4015 190 42 32 chr10 1524 2418 -145586870 + L1MB4 LINE L1 5277 6179 -1 516 80 67 0 chr10 2434 2509 -145586779 + L1MB8 LINE L1 6099 6178 0 756 234 81 5 chr10 2950 3159 -145586129 - L1MB3 LINE L1 0 6183 5959 2683 172 25 25 chr10 3586 4075 -145585213 - L1MCa LINE L1 -5912 514 26 660 179 49 24 chr10 4214 4337 -145584951 - FLAM_A SINE Alu -7 126 1 609 98 6 58 chr10 5450 5624 -145583664 + (CCCTAA)n Simple_repeat Simple_repeat 4 168 0 1523 195 0 27 chr10 5896 6188 -145583100 + AluSx SINE Alu 6 289 -23 2299 94 0 7 chr10 6476 6773 -145582515 + AluSq SINE Alu 1 295 -18 2233 102 7 0 chr10 7137 7432 -145581856 - AluSx SINE Alu -15 297 1 283 81 0 0 chr10 9162 9199 -145580089 + Alu SINE Alu 1 37 -263 2245 109 0 7 chr10 10260 10562 -145578726 - AluSx SINE Alu -12 300 1 422 188 12 0 chr10 10633 10713 -145578575 + AluJ/FRAM SINE Alu 231 311 -1 2379 100 0 0 chr10 10736 11047 -145578241 - AluSx SINE Alu -1 311 1 849 171 38 13 chr10 11047 11205 -145578083 - AluJb SINE Alu -8 304 143 1904 131 13 36 chr10 13392 13698 -145575590 - AluSx SINE Alu -13 299 1 185 108 27 0 chr10 14218 14255 -145575033 + (TAAG)n Simple_repeat Simple_repeat 2 39 0 1743 179 0 7 chr10 14732 15029 -145574259 + AluSx SINE Alu 1 295 -17 23 0 0 0 chr10 15029 15052 -145574236 + AT_rich Low_complexity Low_complexity 1 23 0 415 287 87 41 chr10 15508 15703 -145573585 + MIR SINE MIR 11 214 -48 1953 155 147 5 chr10 15910 16285 -145573003 + MSTA LTR MaLR 1 428 0 351 132 15 44 chr10 16476 16544 -145572744 + MER116 DNA Mariner 3 68 -12 29 0 0 0 chr10 16597 16626 -145572662 + AT_rich Low_complexity Low_complexity 1 29 0 1186 129 0 43 chr10 16629 16815 -145572473 + AluSx SINE Alu 1 178 -134 1523 136 143 8 chr10 17110 17375 -145571913 - AluSx SINE Alu -11 301 1 184 313 0 15 chr10 17877 17944 -145571344 - MIR SINE MIR 0 262 197 2063 130 20 0 chr10 17974 18274 -145571014 - AluSx SINE Alu -6 306 1 201 74 0 0 chr10 18369 18396 -145570892 + (CA)n Simple_repeat Simple_repeat 2 28 0 199 341 154 11 chr10 19543 19634 -145569654 - L2 LINE L2 -19 3253 3150 505 135 27 0 chr10 19672 19746 -145569542 + FRAM SINE Alu 49 124 -52 1315 217 71 0 chr10 20375 20656 -145568632 - AluJb SINE Alu 0 302 2 33 43 0 0 chr10 20992 21039 -145568249 + AT_rich Low_complexity Low_complexity 1 47 0 2409 61 0 0 chr10 21244 21540 -145567748 - AluY SINE Alu -15 296 1 187 194 81 48 chr10 21811 21873 -145567415 - L2 LINE L2 -618 2696 2633 28 29 0 0 chr10 24537 24572 -145564716 + AT_rich Low_complexity Low_complexity 1 35 0 204 198 209 55 chr10 25010 25101 -145564187 + L2 LINE L2 1860 1964 -1350 24802 39 8 0 chr10 25210 28845 -145560443 - L1PA4 LINE L1 -11 6144 2486 930 186 6 6 chr10 28959 29120 -145560168 - AluJb SINE Alu -15 297 137 1085 318 54 23 chr10 29129 29614 -145559674 + L2 LINE L2 2069 2568 -746 1932 206 29 55 chr10 30088 30598 -145558690 - L1M4 LINE L1 -924 5222 4726 672 289 213 49 chr10 30731 31402 -145557886 - L2 LINE L2 -816 2498 1718 240 258 52 0 chr10 31482 31579 -145557709 - HAL1 LINE L1 -75 2432 2331 1025 277 41 32 chr10 31724 32063 -145557225 + MLT1I LTR MaLR 62 403 -6 246 333 92 13 chr10 32097 32332 -145556956 - L2 LINE L2 -285 2987 2732 893 210 99 67 chr10 32620 32992 -145556296 + HAL1 LINE L1 804 1187 -1320 800 255 200 43 chr10 33029 33593 -145555695 + HAL1 LINE L1 1284 1936 -571 2245 248 133 77 chr10 33636 33904 -145555384 + L1MC4a LINE L1 3696 3947 -2231 13169 160 42 23 chr10 33904 36277 -145553011 + Tigger1 DNA MER2_type 1 2418 0 2245 248 133 77 chr10 36277 37687 -145551601 + L1MC4a LINE L1 3947 5484 -694 1924 131 13 19 chr10 37687 38001 -145551287 + AluJb SINE Alu 1 312 0 2245 248 133 77 chr10 38001 38306 -145550982 + L1MC4a LINE L1 5484 5770 -408 4335 85 15 102 chr10 38500 39227 -145550061 + MER4A LTR ERV1 1 664 0 1097 153 0 0 chr10 40098 40268 -145549020 - FRAM SINE Alu -6 170 1 2267 91 0 0 chr10 40981 41279 -145548009 + AluSc SINE Alu 1 298 -11 373 246 65 36 chr10 41921 42059 -145547229 - MIR3 SINE MIR -6 202 61 194 0 39 0 chr10 42088 42114 -145547174 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 791 245 50 10 chr10 42468 42668 -145546620 - MIR SINE MIR -37 225 18 239 297 228 0 chr10 42675 42776 -145546512 - MIR SINE MIR -134 128 5 1862 141 14 0 chr10 42788 43079 -145546209 + AluJb SINE Alu 1 295 -17 1560 177 0 11 chr10 43502 43779 -145545509 - AluJo SINE Alu -38 274 1 389 164 0 0 chr10 44143 44216 -145545072 + LTR30 LTR ERV1 552 624 -98 36 40 0 0 chr10 44220 44270 -145545018 + AT_rich Low_complexity Low_complexity 1 50 0 1354 176 33 0 chr10 46002 46247 -145543041 - Tigger7 DNA MER2_type -22 2469 2217 31 44 0 0 chr10 46866 46911 -145542377 + GC_rich Low_complexity Low_complexity 1 45 0 407 133 67 0 chr10 47165 47240 -145542048 + AluJ/FRAM SINE Alu 219 298 -14 1363 239 12 60 chr10 47242 47664 -145541624 - L1M4 LINE L1 -1293 4853 4455 1984 149 0 3 chr10 47664 47973 -145541315 - AluY SINE Alu -3 308 1 1363 239 12 60 chr10 47973 48032 -145541256 - L1M4 LINE L1 -1691 4455 4395 863 212 25 5 chr10 48034 48232 -145541056 - AluJo SINE Alu -24 288 87 296 56 0 0 chr10 48253 48289 -145540999 - MER31-int LTR ERV1 -3839 1097 1062 697 132 0 0 chr10 48289 48395 -145540893 + MLT2B3 LTR ERVL 1 106 -448 226 241 60 36 chr10 48850 48933 -145540355 - L1MC4 LINE L1 -2 8040 7956 347 347 35 0 chr10 49191 49335 -145539953 - L1MC4 LINE L1 -524 7518 7370 189 339 27 18 chr10 49340 49452 -145539836 + L2 LINE L2 2687 2799 -515 1220 165 148 8 chr10 49891 50134 -145539154 + AluJb SINE Alu 1 277 -35 298 203 130 0 chr10 50145 50214 -145539074 + LTR35 LTR ERV1 453 530 -88 443 169 26 0 chr10 50275 50352 -145538936 + LTR35 LTR ERV1 540 618 0 21 0 0 0 chr10 50398 50419 -145538869 + AT_rich Low_complexity Low_complexity 1 21 0 1552 45 0 0 chr10 50529 50705 -145538583 - L1PA3 LINE L1 -2 6153 5978 1874 133 10 20 chr10 50814 51116 -145538172 + AluSx SINE Alu 13 311 -1 2045 144 0 10 chr10 51274 51587 -145537701 + AluSx SINE Alu 1 310 -2 1873 107 50 7 chr10 51595 51875 -145537413 + AluSq SINE Alu 1 292 -21 1529 169 61 0 chr10 51889 52168 -145537120 + AluJo SINE Alu 1 296 -16 1842 146 3 34 chr10 52188 52511 -145536777 + AluSq SINE Alu 1 313 0 2038 101 3 14 chr10 52517 52814 -145536474 + AluSx SINE Alu 1 294 -18 1931 125 3 13 chr10 52816 53128 -145536160 + AluSg1 SINE Alu 1 309 0 432 127 0 13 chr10 53449 53528 -145535760 - AluJ/FRAM SINE Alu -3 309 232 2247 75 3 10 chr10 53604 53911 -145535377 + AluSp SINE Alu 1 305 -8 2190 90 0 0 chr10 54624 54914 -145534374 + AluSq SINE Alu 15 304 -9 394 82 0 0 chr10 55568 55617 -145533671 + Alu SINE Alu 15 63 -239 800 192 0 0 chr10 57085 57241 -145532047 + AluSg/x SINE Alu 146 301 -11 1680 177 0 10 chr10 57430 57741 -145531547 - AluJb SINE Alu -4 308 1 198 0 0 0 chr10 57860 57882 -145531406 + (T)n Simple_repeat Simple_repeat 1 22 0 188 200 67 0 chr10 57891 57936 -145531352 + MER5B DNA MER1_type 84 131 -47 6384 154 24 75 chr10 57959 59898 -145529390 - L1MA4A LINE L1 -7 6147 4373 2720 98 0 6 chr10 59898 60264 -145529024 + THE1B LTR MaLR 1 364 0 6384 154 24 75 chr10 60264 60646 -145528642 - L1MA4A LINE L1 -1781 4373 3973 288 330 17 0 chr10 62383 62501 -145526787 - L1MEc LINE L1 -6068 328 209 402 21 0 0 chr10 62502 62549 -145526739 + (TTA)n Simple_repeat Simple_repeat 2 48 0 1978 58 0 0 chr10 62558 62798 -145526490 - AluY SINE Alu -37 274 35 5520 42 0 0 chr10 63095 63770 -145525518 - L1P LINE L1 -2255 3891 3217 19034 70 11 0 chr10 63771 66217 -145523071 + L1P LINE L1 449 2921 -3225 485 205 197 0 chr10 66870 66987 -145522301 + MER82 DNA MER2_type 4 143 -510 1861 216 28 56 chr10 67431 67895 -145521393 + MER82 DNA MER2_type 200 650 -3 662 126 0 0 chr10 68076 68163 -145521125 - 5S rRNA rRNA -31 90 4 828 145 0 0 chr10 68589 68713 -145520575 + FLAM_C SINE Alu 1 124 -19 21 0 0 0 chr10 68968 68989 -145520299 + AT_rich Low_complexity Low_complexity 1 21 0 634 273 45 0 chr10 69258 69434 -145519854 + MER20 DNA MER1_type 7 190 -29 424 290 3 30 chr10 69573 69947 -145519341 + G-rich Low_complexity Low_complexity 1 363 0 * 511 251 17 33 chr10 69883 70153 -145519135 + GA-rich Low_complexity Low_complexity 1 265 0 444 164 0 0 chr10 70223 70290 -145518998 - AluJ/FLAM SINE Alu -240 72 6 770 146 0 49 chr10 70318 70462 -145518826 - FLAM_C SINE Alu 0 143 7 266 256 31 19 chr10 70495 70655 -145518633 + L1M4 LINE L1 4348 4509 -1637 1646 232 96 15 chr10 70694 71280 -145518008 + L1M4 LINE L1 4740 5372 -774 1795 156 3 0 chr10 71284 71572 -145517716 + AluSx SINE Alu 3 291 -21 296 242 110 11 chr10 71584 71669 -145517619 + MLT1D LTR MaLR 278 371 -134 349 230 80 35 chr10 71669 71782 -145517506 + LTR35 LTR ERV1 1 118 -500 327 253 11 11 chr10 71909 72000 -145517288 + LTR58 LTR ERV1 350 440 -239 468 254 51 0 chr10 72157 72275 -145517013 + LTR35 LTR ERV1 495 618 0 * 734 176 0 14 chr10 72275 72393 -145516895 + MLT1C LTR MaLR 280 467 0 747 50 0 0 chr10 74282 74382 -145514906 + (CA)n Simple_repeat Simple_repeat 2 101 0 202 179 54 0 chr10 75914 75970 -145513318 + (CATCC)n Simple_repeat Simple_repeat 4 62 0 246 264 0 0 chr10 77070 77176 -145512112 + (CA)n Simple_repeat Simple_repeat 1 106 0 205 211 0 22 chr10 77347 77437 -145511851 + (CA)n Simple_repeat Simple_repeat 1 88 0 331 246 57 74 chr10 79605 79727 -145509561 - MIR SINE MIR -62 200 81 1980 129 0 13 chr10 79741 80050 -145509238 - AluSx SINE Alu -7 305 1 234 148 113 0 chr10 81200 81256 -145508032 - MIR SINE MIR -61 147 91 373 172 21 86 chr10 81502 81595 -145507693 + AluSg/x SINE Alu 204 290 -10 184 312 75 65 chr10 81604 81697 -145507591 + MIR3 SINE MIR 113 206 -2 360 77 0 0 chr10 82218 82270 -145507018 + (CA)n Simple_repeat Simple_repeat 2 53 0 559 206 89 48 chr10 82697 82843 -145506445 - FAM SINE Alu -20 165 14 815 176 14 0 chr10 83826 83954 -145505334 + AluJb SINE Alu 2 134 -178 2050 139 0 0 chr10 83954 84256 -145505032 + AluSx SINE Alu 1 302 -10 815 176 14 0 chr10 84256 84269 -145505019 + AluJb SINE Alu 134 145 -167 4144 195 84 5 chr10 84271 85602 -145503686 - MER52A LTR ERV1 -2 1753 177 325 326 11 80 chr10 86275 86450 -145502838 + L1MC5 LINE L1 7769 7931 -30 444 37 0 0 chr10 86744 86798 -145502490 + (CA)n Simple_repeat Simple_repeat 2 55 0 1828 139 75 33 chr10 87606 87965 -145501323 - THE1C LTR MaLR -1 374 1 2199 92 3 22 chr10 87966 88283 -145501005 - THE1C-int LTR MaLR -1 1579 1269 283 100 0 83 chr10 88289 88349 -145500939 - L1PA10 LINE L1 -4 6164 6110 819 131 0 0 chr10 88359 88489 -145500799 - L1M2 LINE L1 -818 5473 5344 739 153 6 102 chr10 88488 88665 -145500623 + L1 LINE L1 3802 3961 -2185 * 456 196 140 0 chr10 88784 88891 -145500397 + L1 LINE L1 3975 4096 -2050 655 149 53 0 chr10 88891 89005 -145500283 - MSTB1 LTR MaLR 0 432 313 7497 126 8 68 chr10 89005 90430 -145498858 - THE1C-int LTR MaLR -299 1352 1 1684 145 99 34 chr10 90430 90782 -145498506 - THE1C LTR MaLR 0 375 1 1084 149 99 27 chr10 91053 91275 -145498013 + MER4B LTR ERV1 1 238 -372 10215 92 3 8 chr10 91277 91447 -145497841 - HERVL-A2 LTR ERVL -4306 1348 1179 2142 112 0 0 chr10 91447 91751 -145497537 - AluY SINE Alu -7 304 1 10215 92 3 8 chr10 91751 92935 -145496353 - HERVL-A2 LTR ERVL -4475 1179 1 2911 110 50 11 chr10 92935 93371 -145495917 - MLT2A2 LTR ERVL 0 453 1 2214 106 0 0 chr10 93538 93841 -145495447 - AluSx SINE Alu -9 303 1 23 78 0 0 chr10 93894 93945 -145495343 + AT_rich Low_complexity Low_complexity 1 51 0 1389 180 71 4 chr10 93949 94216 -145495072 + AluJb SINE Alu 4 288 -24 1310 194 110 68 chr10 94368 94723 -145494565 + MLT1A2 LTR MaLR 1 370 -4 237 316 61 10 chr10 95123 95221 -145494067 + MIR SINE MIR 82 184 -78 1837 143 85 109 chr10 95590 95840 -145493448 + MER4B LTR ERV1 3 239 -371 2247 82 0 7 chr10 95840 96144 -145493144 + AluY SINE Alu 10 311 0 1837 143 85 109 chr10 96144 96353 -145492935 + MER4B LTR ERV1 239 451 -159 7006 237 84 26 chr10 96789 98368 -145490920 - MER52A LTR ERV1 0 1755 85 3974 170 30 30 chr10 98707 99424 -145489864 - MER4E LTR ERV1 -3 776 57 3933 153 9 8 chr10 99424 100058 -145489230 - MER41B LTR ERV1 0 635 1 3974 170 30 30 chr10 100058 100116 -145489172 - MER4E LTR ERV1 -721 58 1 223 196 22 0 chr10 100436 100482 -145488806 + GA-rich Low_complexity Low_complexity 2 48 0 46 19 0 0 chr10 101256 101309 -145487979 + AT_rich Low_complexity Low_complexity 1 53 0 2197 112 0 0 chr10 101417 101720 -145487568 - AluSx SINE Alu -9 303 1 1941 111 7 7 chr10 101791 102071 -145487217 - AluSq SINE Alu -33 280 1 662 219 128 27 chr10 102263 102450 -145486838 - MER3 DNA MER1_type -3 206 1 2066 134 0 0 chr10 103215 103532 -145485756 - AluSx SINE Alu 0 317 1 2019 137 137 8 chr10 103603 103982 -145485306 - MSTA LTR MaLR 0 428 1 207 250 19 0 chr10 104373 104425 -145484863 + (TA)n Simple_repeat Simple_repeat 2 54 0 4907 192 76 14 chr10 104652 105913 -145483375 + L1MC1 LINE L1 570 1751 -4675 318 50 0 0 chr10 105913 105953 -145483335 + (TG)n Simple_repeat Simple_repeat 1 40 0 4907 192 76 14 chr10 105953 107120 -145482168 + L1MC1 LINE L1 1751 3246 -3180 4661 235 24 47 chr10 107116 107366 -145481922 + L1MC1 LINE L1 4164 4418 -2008 * 1840 184 16 27 chr10 107366 107735 -145481553 - MLT1A1 LTR MaLR 0 365 1 4661 235 24 47 chr10 107735 108967 -145480321 + L1MC1 LINE L1 4418 5612 -814 1221 183 48 28 chr10 108967 109219 -145480069 + AluJo SINE Alu 45 301 -11 4305 166 23 7 chr10 109222 109995 -145479293 + L1MC1 LINE L1 5595 6380 -233 1612 134 7 29 chr10 110499 110775 -145478513 + L1MC1 LINE L1 6056 6325 -8 2063 100 0 4 chr10 110804 111085 -145478203 + AluSq SINE Alu 30 309 -4 24 0 0 0 chr10 111236 111260 -145478028 + AT_rich Low_complexity Low_complexity 1 24 0 182 298 43 32 chr10 112294 112388 -145476900 - L2 LINE L2 -291 2981 2887 427 298 16 8 chr10 112546 112670 -145476618 + L2 LINE L2 3189 3313 0 1072 245 14 34 chr10 113236 113587 -145475701 - L1MEc LINE L1 -4286 2110 1767 23 54 0 0 chr10 114071 114108 -145475180 + AT_rich Low_complexity Low_complexity 1 37 0 2180 99 0 7 chr10 115896 116190 -145473098 - AluSg SINE Alu -18 292 1 1770 154 7 3 chr10 116831 117116 -145472172 + AluSx SINE Alu 5 290 -22 1523 231 111 55 chr10 118676 119655 -145469633 - L1MC5 LINE L1 -449 7512 6476 2219 110 7 3 chr10 121026 121334 -145467954 + AluSq SINE Alu 5 313 0 586 200 0 8 chr10 121496 121626 -145467662 - AluSg/x SINE Alu -7 302 174 398 316 172 5 chr10 122413 122628 -145466660 - MIR SINE MIR 0 262 12 327 260 102 16 chr10 122716 122843 -145466445 - MIR SINE MIR -65 197 60 500 288 112 0 chr10 123292 123462 -145465826 - MIR SINE MIR -66 196 8 311 313 51 28 chr10 124113 124547 -145464741 - L1M4 LINE L1 -748 5398 4955 233 261 52 96 chr10 124715 124830 -145464458 + L2 LINE L2 3197 3306 -7 193 288 51 0 chr10 124913 124972 -145464316 + MIR SINE MIR 64 125 -83 1762 202 93 134 chr10 124985 125305 -145463983 - L1ME1 LINE L1 -88 6078 5747 1654 149 4 39 chr10 125305 125586 -145463702 - AluJb SINE Alu -21 291 21 559 138 0 0 chr10 125586 125673 -145463615 - AluJ/FLAM SINE Alu -225 87 1 1762 202 93 134 chr10 125673 126125 -145463163 - L1ME1 LINE L1 -417 5749 5254 437 351 69 48 chr10 126149 126568 -145462720 + HAL1 LINE L1 1236 1663 -844 640 241 73 5 chr10 126750 126941 -145462347 + L1ME3A LINE L1 5746 5949 -221 535 143 9 9 chr10 130544 130656 -145458632 + CT-rich Low_complexity Low_complexity 2 113 0 246 253 118 51 chr10 130700 130766 -145458522 - L1ME LINE L1 -213 5908 5848 1431 193 39 18 chr10 130766 131051 -145458237 - AluJb SINE Alu -21 291 1 246 253 118 51 chr10 131051 131162 -145458126 - L1ME LINE L1 -273 5848 5719 1239 127 0 0 chr10 131185 131350 -145457938 - AluJ SINE Alu -14 298 134 235 237 0 0 chr10 131484 131522 -145457766 - FLAM_C SINE Alu 0 170 133 180 0 0 0 chr10 131524 131544 -145457744 + (TG)n Simple_repeat Simple_repeat 2 21 0 535 104 72 13 chr10 131547 131771 -145457517 + (TA)n Simple_repeat Simple_repeat 1 237 0 803 154 24 0 chr10 131771 131894 -145457394 - FLAM_C SINE Alu -6 127 2 314 298 130 19 chr10 131946 132154 -145457134 - L1ME LINE L1 -479 5642 5412 189 0 0 0 chr10 132904 132925 -145456363 + (CA)n Simple_repeat Simple_repeat 2 22 0 21 36 0 0 chr10 134374 134402 -145454886 + AT_rich Low_complexity Low_complexity 1 28 0 283 358 0 0 chr10 134432 134541 -145454747 + L1M4 LINE L1 4031 4139 -2007 366 293 37 16 chr10 134615 134803 -145454485 + L1M4 LINE L1 4334 4525 -1621 252 291 0 0 chr10 134841 134927 -145454361 + L1M4 LINE L1 4616 4701 -1445 296 331 37 25 chr10 135258 135421 -145453867 - L1MC/D LINE L1 -1983 5825 5661 348 246 129 75 chr10 135604 135884 -145453404 - L1 LINE L1 -1646 4500 4206 432 331 106 51 chr10 135973 136541 -145452747 - L1 LINE L1 -2139 4007 3409 1784 184 3 0 chr10 136727 137031 -145452257 + AluJb SINE Alu 1 305 -7 2278 91 0 0 chr10 137397 137684 -145451604 + AluSx SINE Alu 1 287 -25 21 0 0 0 chr10 138140 138161 -145451127 + AT_rich Low_complexity Low_complexity 1 21 0 6255 37 5 0 chr10 138161 138914 -145450374 - L1PA3 LINE L1 0 6155 5399 * 7906 31 5 0 chr10 138905 139866 -145449422 + L1PA3 LINE L1 4430 5395 -751 490 197 88 15 chr10 140139 140276 -145449012 - HAL1b LINE L1 -853 495 349 273 163 0 0 chr10 140322 140371 -145448917 + (TATATG)n Simple_repeat Simple_repeat 5 53 0 1767 123 12 108 chr10 142200 142533 -145446755 + AluJo SINE Alu 1 301 -11 445 311 41 18 chr10 143804 144012 -145445276 + MIR SINE MIR 3 209 -53 514 265 15 103 chr10 144439 144643 -145444645 + MER91B DNA MER1_type 4 189 -1 713 189 8 0 chr10 145645 145767 -145443521 + FLAM_A SINE Alu 1 123 -10 2025 149 0 0 chr10 146871 147173 -145442115 - AluJo SINE Alu -5 307 6 32 26 0 0 chr10 148180 148219 -145441069 + AT_rich Low_complexity Low_complexity 1 39 0 1727 146 79 7 chr10 148574 148854 -145440434 + AluSx SINE Alu 1 300 -12 757 296 71 0 chr10 148984 149224 -145440064 - MIR SINE MIR 0 262 6 2147 108 0 29 chr10 154355 154661 -145434627 - AluSx SINE Alu -15 297 1 180 125 0 0 chr10 154746 154778 -145434510 + (TTTTC)n Simple_repeat Simple_repeat 2 33 0 1556 191 16 3 chr10 156666 156969 -145432319 - AluJo SINE Alu -5 307 1 355 241 259 0 chr10 157215 157381 -145431907 + MER3 DNA MER1_type 1 209 0 322 157 0 0 chr10 157342 157393 -145431895 - MER3 DNA MER1_type -123 86 36 * 311 297 78 99 chr10 161439 161516 -145427772 + MER5A DNA MER1_type 2 79 -110 2359 99 0 0 chr10 161516 161819 -145427469 + AluSg SINE Alu 3 305 -5 311 297 78 99 chr10 161819 161933 -145427355 + MER5A DNA MER1_type 79 189 0 224 330 187 0 chr10 162165 162256 -145427032 - L2 LINE L2 -8 3305 3198 1341 198 53 14 chr10 162276 162559 -145426729 + MER58B DNA MER1_type 48 341 0 389 259 9 36 chr10 164409 164521 -145424767 + MER5B DNA MER1_type 15 123 -55 397 259 103 73 chr10 164533 164765 -145424523 - L1ME2 LINE L1 -10 6154 5916 288 0 0 0 chr10 166300 166332 -145422956 + (TG)n Simple_repeat Simple_repeat 1 32 0 229 70 23 93 chr10 166348 166391 -145422897 + L1MA8 LINE L1 6120 6159 -132 376 172 103 11 chr10 166393 166480 -145422808 + L1MA8 LINE L1 6191 6285 -6 * 437 266 87 17 chr10 166449 166690 -145422598 - L1MC4a LINE L1 -1341 6467 6210 1028 95 0 0 chr10 168682 168819 -145420469 + FLAM_C SINE Alu 1 137 -6 26 0 0 0 chr10 169592 169618 -145419670 + AT_rich Low_complexity Low_complexity 1 26 0 1846 152 10 3 chr10 169895 170191 -145419097 + AluJo SINE Alu 13 310 -2 2548 44 0 0 chr10 170290 170587 -145418701 + AluY SINE Alu 1 297 -14 30 0 0 0 chr10 171088 171118 -145418170 + AT_rich Low_complexity Low_complexity 1 30 0 1943 147 3 20 chr10 171242 171548 -145417740 + AluJb SINE Alu 1 301 -11 338 283 0 0 chr10 173802 173894 -145415394 + L1MC4 LINE L1 6610 6701 -1341 * 342 299 0 0 chr10 173827 173914 -145415374 - L1MC4 LINE L1 -1340 6702 6616 304 234 10 15 chr10 173923 174028 -145415260 + L1MC4 LINE L1 1995 6983 -1339 863 159 12 40 chr10 174032 174245 -145415043 - L1P4 LINE L1 -355 5801 5604 26 64 0 0 chr10 174281 174328 -145414960 + AT_rich Low_complexity Low_complexity 1 47 0 8205 84 5 7 chr10 175081 176199 -145413089 + L1P LINE L1 1655 2769 -3377 2448 62 0 13 chr10 176357 176661 -145412627 - AluY SINE Alu -11 300 1 23 54 0 0 chr10 176967 177004 -145412284 + AT_rich Low_complexity Low_complexity 1 37 0 180 0 0 0 chr10 178230 178250 -145411038 + (T)n Simple_repeat Simple_repeat 1 20 0 201 74 0 0 chr10 179941 179968 -145409320 + (TCC)n Simple_repeat Simple_repeat 1 27 0 807 11 0 0 chr10 184647 184737 -145404551 - 5S rRNA rRNA -31 90 1 229 299 143 0 chr10 186821 186898 -145402390 + L2 LINE L2 3160 3247 -25 1965 211 70 2 chr10 187008 187496 -145401792 + L1MA9 LINE L1 5792 6312 0 717 191 140 0 chr10 189637 189773 -145399515 - AluJb SINE Alu -11 301 147 186 43 0 0 chr10 190281 190304 -145398984 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 1128 237 110 52 chr10 190314 190761 -145398527 + MLT1J LTR MaLR 1 473 -38 1565 207 7 10 chr10 191807 192102 -145397186 - AluJb SINE Alu -18 294 1 2634 40 0 0 chr10 194899 195200 -145394088 - AluY SINE Alu -10 301 1 22 0 0 0 chr10 195482 195504 -145393784 + AT_rich Low_complexity Low_complexity 1 22 0 2371 92 0 0 chr10 196769 197064 -145392224 + AluSc SINE Alu 2 296 -13 2168 119 0 7 chr10 197729 198023 -145391265 - AluJb SINE Alu -19 293 2 234 167 37 19 chr10 198244 198298 -145390990 - MER5A DNA MER1_type -122 67 13 364 228 20 30 chr10 199739 199840 -145389448 + MIR SINE MIR 162 261 -1 2264 90 0 0 chr10 200131 200419 -145388869 + AluY SINE Alu 1 288 -23 24 77 0 0 chr10 200721 200773 -145388515 + AT_rich Low_complexity Low_complexity 1 52 0 248 323 156 49 chr10 202127 202390 -145386898 + L2 LINE L2 2894 3184 -88 423 152 0 0 chr10 203060 203126 -145386162 - MADE1 DNA Mariner -14 66 1 229 195 69 81 chr10 204639 204726 -145384562 - L1MB3 LINE L1 -1 6182 6097 528 240 14 4 chr10 206559 206768 -145382520 - MER65C LTR ERV1 -159 302 1 826 201 0 13 chr10 206827 206981 -145382307 + FRAM SINE Alu 1 152 -14 1391 201 47 0 chr10 209273 209552 -145379736 + AluJb SINE Alu 21 312 0 23 0 0 0 chr10 209643 209666 -145379622 + AT_rich Low_complexity Low_complexity 1 23 0 1226 133 55 62 chr10 209688 210030 -145379258 + L1MA5A LINE L1 5083 5427 -743 580 165 0 10 chr10 210043 210146 -145379142 - MER41B LTR ERV1 -88 547 446 1225 112 0 51 chr10 210146 210208 -145379080 + L1MA5A LINE L1 5413 5477 -820 2425 71 0 0 chr10 210208 210518 -145378770 + AluY SINE Alu 1 310 -1 1225 112 0 51 chr10 210518 210652 -145378636 + L1MA5A LINE L1 5477 5599 -698 796 115 0 18 chr10 210658 210771 -145378517 + AluSg SINE Alu 37 147 -163 3399 46 2 0 chr10 210771 211202 -145378086 - L1PA5 LINE L1 -748 5398 4967 6157 51 0 0 chr10 211202 211946 -145377342 + L1PA5 LINE L1 5410 6154 0 968 99 56 0 chr10 211946 212113 -145377175 + AluSg SINE Alu 134 308 0 294 29 0 0 chr10 212132 212167 -145377121 + (CA)n Simple_repeat Simple_repeat 1 35 0 3365 169 75 5 chr10 212168 212823 -145376465 + L1MA5A LINE L1 5596 6296 -1 1552 250 136 8 chr10 212824 213420 -145375868 - L1MC3 LINE L1 -3 7782 7111 895 238 117 67 chr10 213895 214357 -145374931 - L1MC4 LINE L1 -6 8036 7552 22 0 0 0 chr10 214368 214390 -145374898 + AT_rich Low_complexity Low_complexity 1 22 0 3486 186 49 47 chr10 214390 215415 -145373873 + L1MB3 LINE L1 4985 6028 -155 180 320 0 13 chr10 215896 215974 -145373314 - L2 LINE L2 -1279 2035 1959 378 328 143 0 chr10 217069 217258 -145372030 - MIR SINE MIR -16 246 31 1510 237 105 5 chr10 217418 217819 -145371469 - Tigger3b DNA MER2_type 0 1231 791 245 222 19 0 chr10 217915 217969 -145371319 - Tigger3b DNA MER2_type -386 845 791 * 270 178 0 0 chr10 217966 218011 -145371277 - Tigger3b DNA MER2_type -386 845 801 2822 193 97 50 chr10 218172 218396 -145370892 - Tigger3b DNA MER2_type -2184 844 632 2380 78 3 0 chr10 218396 218705 -145370583 - AluSp SINE Alu -3 310 1 2822 193 97 50 chr10 218705 219285 -145370003 - Tigger3b DNA MER2_type -2396 632 2 204 320 51 0 chr10 219408 219486 -145369802 + (CATG)n Simple_repeat Simple_repeat 1 82 0 376 255 27 20 chr10 219537 219686 -145369602 + (CA)n Simple_repeat Simple_repeat 1 150 0 319 320 11 22 chr10 220047 220225 -145369063 + (CA)n Simple_repeat Simple_repeat 1 176 0 1488 203 0 7 chr10 220530 220811 -145368477 - AluJo SINE Alu -20 292 14 29 0 0 0 chr10 220848 220877 -145368411 + AT_rich Low_complexity Low_complexity 1 29 0 1710 193 97 0 chr10 221751 222124 -145367164 + MSTB1 LTR MaLR 24 432 0 297 248 116 16 chr10 223758 223879 -145365409 - MER20 DNA MER1_type -60 159 27 1886 136 27 0 chr10 224431 224725 -145364563 - AluSx SINE Alu -10 302 1 1538 195 82 0 chr10 228282 228600 -145360688 - MER2 DNA MER2_type 0 344 1 831 208 72 22 chr10 229537 229804 -145359484 - MLT1A1 LTR MaLR -7 367 1 492 303 123 44 chr10 230010 230350 -145358938 - L1MCc LINE L1 -4410 2712 2346 644 287 82 51 chr10 230481 231114 -145358174 - L1MCc LINE L1 -4887 1536 1252 331 317 127 17 chr10 231583 231883 -145357405 - L1MCc LINE L1 -6074 349 17 22 0 0 0 chr10 231885 231907 -145357381 + AT_rich Low_complexity Low_complexity 1 22 0 320 284 23 0 chr10 232117 232205 -145357083 + MER58 DNA MER1_type 177 266 -2154 1941 133 0 29 chr10 233717 234026 -145355262 - AluSx SINE Alu -12 300 1 1851 110 0 4 chr10 235076 235339 -145353949 + AluSg SINE Alu 36 297 -13 843 152 0 14 chr10 235450 235595 -145353693 + FLAM_C SINE Alu 1 143 0 305 212 169 8 chr10 237441 237559 -145351729 + L1ME4a LINE L1 5985 6121 0 2040 121 0 0 chr10 238798 239103 -145350185 + AluY SINE Alu 1 305 -6 1820 131 12 44 chr10 239714 240034 -145349254 + AluJb SINE Alu 1 310 -2 679 195 0 17 chr10 241396 241514 -145347774 - FLAM_A SINE Alu -17 116 1 489 151 244 34 chr10 243859 243978 -145345310 + MER58A DNA MER1_type 46 189 -35 600 209 118 13 chr10 244536 244689 -145344599 - MER20 DNA MER1_type -9 210 42 568 252 167 9 chr10 244689 244899 -145344389 - L2 LINE L2 -1366 1948 1706 24 0 0 0 chr10 245507 245531 -145343757 + AT_rich Low_complexity Low_complexity 1 24 0 2066 93 3 23 chr10 248103 248404 -145340884 + AluSx SINE Alu 1 295 -17 190 380 120 9 chr10 248836 248944 -145340344 - MIR SINE MIR -141 121 2 380 159 439 8 chr10 249167 249299 -145339989 - MER5A DNA MER1_type 0 189 1 367 235 161 37 chr10 249525 249687 -145339601 - MER5A DNA MER1_type 0 189 8 854 197 175 11 chr10 249758 250027 -145339261 - MER33 DNA MER1_type 0 324 12 269 282 27 45 chr10 250609 250719 -145338569 - L2 LINE L2 -24 3289 3182 203 273 0 0 chr10 251440 251484 -145337804 + (TATG)n Simple_repeat Simple_repeat 4 47 0 742 186 0 0 chr10 251544 251668 -145337620 + FLAM_C SINE Alu 5 128 -5 3003 163 61 40 chr10 252292 252919 -145336369 - LTR49-int LTR ERV1 -3127 3204 2565 2252 82 0 25 chr10 252924 253243 -145336045 + AluY SINE Alu 1 311 0 1984 127 14 0 chr10 253271 253563 -145335725 - AluSg1 SINE Alu -13 296 1 1876 239 57 11 chr10 253563 254095 -145335193 - LTR49-int LTR ERV1 -3858 2473 1839 646 150 74 104 chr10 254144 254298 -145334990 - LTR49-int LTR ERV1 -2645 2235 2078 1923 113 46 0 chr10 254298 254580 -145334708 + AluSc SINE Alu 3 297 -12 646 150 74 104 chr10 254580 254671 -145334617 - LTR49-int LTR ERV1 -2802 2078 1501 262 146 0 36 chr10 254670 254725 -145334563 - LTR49-int LTR ERV1 -4996 1335 1283 * 274 268 42 0 chr10 254725 254796 -145334492 - tRNA-Glu-GAG tRNA tRNA 0 75 2 283 244 13 13 chr10 254818 254896 -145334392 - LTR49-int LTR ERV1 -5138 1193 1116 338 156 0 31 chr10 255022 255086 -145334202 - LTR49-int LTR ERV1 -3690 1181 1120 3244 134 10 4 chr10 255839 256333 -145332955 - LOR1a LTR ERV1 0 497 1 1330 157 19 83 chr10 256504 256637 -145332651 - LTR56 LTR ERV1 -1 444 304 2307 128 0 0 chr10 256637 256949 -145332339 - AluSx SINE Alu 0 312 1 1330 157 19 83 chr10 256949 257127 -145332161 - LTR56 LTR ERV1 -141 304 153 888 198 20 20 chr10 258068 258270 -145331018 - LTR56 LTR ERV1 -234 211 10 7473 37 6 7 chr10 258271 259491 -145329797 + L1PA5 LINE L1 4932 6151 -3 439 191 64 0 chr10 259502 259612 -145329676 - LTR37A LTR ERV1 -264 162 46 449 262 162 80 chr10 259698 260339 -145328949 + L1MC4a LINE L1 5326 6019 -1789 945 260 60 0 chr10 261718 261999 -145327289 + MER58B DNA MER1_type 34 331 -10 275 327 27 9 chr10 262661 262771 -145326517 - MER5A DNA MER1_type -74 115 4 2108 128 3 0 chr10 264832 265129 -145324159 + AluSc SINE Alu 1 298 -11 285 208 69 0 chr10 366477 366549 -145222739 - L1MCa LINE L1 -4493 1933 1857 * 562 186 57 0 chr10 366536 366660 -145222628 - L1MCa LINE L1 -5299 1127 997 520 252 32 13 chr10 366666 366821 -145222467 - L1MCa LINE L1 -6250 176 19 471 319 96 21 chr10 366833 367021 -145222267 - L1M4 LINE L1 -2999 3147 2946 1668 176 20 3 chr10 367168 367463 -145221825 - AluJo SINE Alu -12 300 1 351 273 94 0 chr10 368633 368761 -145220527 - Charlie1 DNA MER1_type 0 2761 2622 231 297 102 8 chr10 368828 368956 -145220332 - Charlie1 DNA MER1_type -2602 159 20 24934 92 22 3 chr10 370205 374106 -145215182 + L1PA7 LINE L1 1527 5499 -673 1879 88 60 0 chr10 374208 374476 -145214812 + L1M1 LINE L1 5498 5793 -401 16957 31 10 0 chr10 374476 377249 -145212039 + L1PA2 LINE L1 3372 6153 -2 1879 88 60 0 chr10 377249 377281 -145212007 + L1M1 LINE L1 5793 5822 -372 2879 87 0 3 chr10 377285 377665 -145211623 + L1PA7 LINE L1 5769 6147 -7 2116 108 3 48 chr10 378185 378499 -145210789 + AluSp SINE Alu 1 300 -13 2252 123 0 0 chr10 379022 379323 -145209965 - AluSx SINE Alu -11 301 1 222 403 86 0 chr10 379381 379567 -145209721 + L2 LINE L2 2656 2857 -457 306 318 34 0 chr10 379607 379695 -145209593 - L2 LINE L2 -41 3272 3182 319 296 30 24 chr10 379740 379909 -145209379 + (TAGA)n Simple_repeat Simple_repeat 3 172 0 273 250 15 15 chr10 380489 380557 -145208731 + MIR SINE MIR 81 148 -114 1203 115 6 22 chr10 381457 381640 -145207648 - AluSq SINE Alu -10 303 124 24 96 0 0 chr10 382644 382717 -145206571 + AT_rich Low_complexity Low_complexity 1 73 0 590 290 180 56 chr10 383989 384600 -145204688 - HAL1 LINE L1 -404 2103 1417 2062 144 3 7 chr10 387493 387798 -145201490 - AluSg SINE Alu -6 304 1 1797 150 28 0 chr10 391987 392273 -145197015 - AluJo SINE Alu -18 294 1 2556 68 10 0 chr10 395732 396040 -145193248 - AluY SINE Alu 0 311 1 206 279 15 29 chr10 396568 396636 -145192652 - MIR SINE MIR -118 144 78 241 67 133 0 chr10 400730 400775 -145188513 + Alu SINE Alu 238 288 -14 2694 209 39 46 chr10 402904 403620 -145185668 + L1MA9 LINE L1 5495 6205 -107 630 227 85 0 chr10 403765 403941 -145185347 + MER2 DNA MER2_type 1 191 -154 229 279 58 0 chr10 404164 404250 -145185038 + MER2 DNA MER2_type 101 191 -154 243 260 52 0 chr10 404562 404639 -145184649 + MER2 DNA MER2_type 101 181 -164 273 264 46 0 chr10 404803 404890 -145184398 + MER2 DNA MER2_type 101 191 -154 245 250 66 0 chr10 404883 404959 -145184329 + MER2 DNA MER2_type 101 181 -164 * 756 245 46 33 chr10 404962 405007 -145184281 + MER2 DNA MER2_type 101 144 -201 2181 103 0 3 chr10 405007 405289 -145183999 + AluY SINE Alu 1 281 -30 180 0 0 0 chr10 405291 405311 -145183977 + (CAAT)n Simple_repeat Simple_repeat 2 21 0 756 245 46 33 chr10 405311 405503 -145183785 + MER2 DNA MER2_type 144 344 -1 1689 176 25 0 chr10 406046 406330 -145182958 - AluJb SINE Alu -21 291 1 921 167 12 153 chr10 407511 407960 -145181328 - THE1B LTR MaLR 0 364 1 191 217 87 0 chr10 408690 408736 -145180552 - L2 LINE L2 -2 3311 3262 314 314 34 17 chr10 409907 410025 -145179263 - L2 LINE L2 0 3313 3194 1770 180 18 7 chr10 410027 410311 -145178977 + AluJb SINE Alu 1 287 -25 464 299 61 30 chr10 410513 410677 -145178611 + L1M4 LINE L1 2921 3089 -3057 472 319 91 7 chr10 410692 411095 -145178193 + L1M4 LINE L1 4160 4607 -1539 226 235 99 0 chr10 411485 411566 -145177722 + L1M LINE L1 5301 5389 -970 231 36 0 0 chr10 413135 413163 -145176125 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 317 222 103 34 chr10 417467 417584 -145171704 - MIR SINE MIR -115 147 23 263 324 131 14 chr10 418297 418442 -145170846 - MIR SINE MIR -1 261 100 1632 158 9 85 chr10 420442 420771 -145168517 + AluJb SINE Alu 1 304 -8 2171 122 6 16 chr10 420798 421109 -145168179 + AluSq SINE Alu 1 308 -5 1967 159 3 7 chr10 423605 423914 -145165374 + AluSx SINE Alu 1 308 -4 348 117 39 0 chr10 424505 424582 -145164706 + G-rich Low_complexity Low_complexity 1 80 0 1070 206 81 12 chr10 426615 426935 -145162353 + MLT1A1 LTR MaLR 23 364 -1 184 266 47 0 chr10 429671 429735 -145159553 + MIR SINE MIR 45 111 -97 3886 242 67 1 chr10 429952 431007 -145158281 - L1MC1 LINE L1 -1 6332 5208 244 304 20 0 chr10 432607 432709 -145156579 + (TA)n Simple_repeat Simple_repeat 1 104 0 223 200 246 0 chr10 434021 434131 -145155157 - MER5A DNA MER1_type -18 171 35 230 289 60 0 chr10 436249 436332 -145152956 + MLT1J LTR MaLR 346 433 -78 743 173 7 14 chr10 437971 438110 -145151178 - AluJb SINE Alu -19 293 156 960 134 0 0 chr10 438725 438859 -145150429 + FLAM_C SINE Alu 6 139 -4 244 114 23 23 chr10 438924 438968 -145150320 + MER101B LTR ERV1 13 56 -514 642 273 84 8 chr10 439170 439408 -145149880 + LTR51 LTR ERV1 228 483 -188 369 316 0 0 chr10 440743 440980 -145148308 + GA-rich Low_complexity Low_complexity 1 237 0 699 166 0 64 chr10 440987 441204 -145148084 - AluJb SINE Alu -36 276 1 767 157 40 26 chr10 441724 441952 -145147336 + MER4A LTR ERV1 1 303 -361 363 140 10 194 chr10 441958 442089 -145147199 + MER4B LTR ERV1 517 610 0 2914 13 0 0 chr10 442850 443160 -145146128 - AluYb8 SINE Alu -8 310 1 816 262 112 29 chr10 444190 444575 -145144713 - MLT1C LTR MaLR -4 463 47 257 241 108 0 chr10 444707 444790 -145144498 - MLT1C LTR MaLR -366 101 10 1978 132 10 3 chr10 445978 446274 -145143014 - AluSx SINE Alu -14 298 1 1505 189 22 11 chr10 446352 446627 -145142661 - AluJo SINE Alu -22 290 13 1216 241 89 0 chr10 447446 447749 -145141539 - MER2 DNA MER2_type -14 331 2 567 212 196 6 chr10 448729 448908 -145140380 + L1MB3 LINE L1 5970 6182 -1 975 260 19 11 chr10 451924 452193 -145137095 - L1MB7 LINE L1 -19 6165 5895 2257 207 105 25 chr10 452396 453193 -145136095 - L1MB7 LINE L1 -274 5904 5020 987 210 75 68 chr10 453193 453336 -145135952 + MLT1B LTR MaLR 1 141 -249 2056 125 57 0 chr10 453336 453632 -145135656 - AluSq SINE Alu 0 313 1 987 210 75 68 chr10 453632 453873 -145135415 + MLT1B LTR MaLR 141 388 -2 2257 207 105 25 chr10 453873 453994 -145135294 - L1MB7 LINE L1 -1158 5020 4910 331 167 121 0 chr10 454098 454164 -145135124 - Charlie1 DNA MER1_type 0 2761 2688 2091 127 13 16 chr10 454171 454479 -145134809 + AluSx SINE Alu 1 307 -5 1347 292 155 4 chr10 454479 455215 -145134073 - Charlie1 DNA MER1_type -150 2611 1765 267 168 20 10 chr10 456621 456722 -145132566 + (CAGG)n Simple_repeat Simple_repeat 2 103 0 243 0 0 0 chr10 457088 457115 -145132173 + (A)n Simple_repeat Simple_repeat 1 27 0 416 280 40 40 chr10 457380 457555 -145131733 - MER106A DNA MER1_type -16 220 46 434 245 83 31 chr10 458147 458183 -145131105 - MER3 DNA MER1_type -1 208 175 2198 129 7 0 chr10 458183 458486 -145130802 - AluSx SINE Alu -7 305 1 434 245 83 31 chr10 458486 458641 -145130647 - MER3 DNA MER1_type -34 175 7 2349 83 3 0 chr10 460745 461033 -145128255 + AluY SINE Alu 1 289 -22 184 321 19 0 chr10 463848 463901 -145125387 + MER5A DNA MER1_type 67 120 -69 247 252 28 19 chr10 467054 467161 -145122127 + CT-rich Low_complexity Low_complexity 2 109 0 2234 164 108 24 chr10 467805 468364 -145120924 + MER4B LTR ERV1 1 903 0 2372 238 81 49 chr10 470561 471393 -145117895 + Cheshire DNA MER1_type 509 1366 -1054 459 248 153 0 chr10 471481 471618 -145117670 - L1MEc LINE L1 -6201 195 38 443 328 66 6 chr10 471662 471845 -145117443 + MIR SINE MIR 48 241 -21 251 284 31 102 chr10 474151 474278 -145115010 + MER5A DNA MER1_type 9 126 -52 1948 130 0 11 chr10 474284 474554 -145114734 - AluSg SINE Alu -7 303 37 1735 156 43 0 chr10 474748 475030 -145114258 - AluSx SINE Alu -18 294 1 2718 36 3 0 chr10 475586 475892 -145113396 + AluY SINE Alu 1 307 -4 266 234 52 0 chr10 476249 476326 -145112962 + MER58C DNA MER1_type 117 197 -18 232 323 83 0 chr10 477326 477422 -145111866 - MIR SINE MIR -58 204 101 378 242 24 24 chr10 478534 478658 -145110630 + CT-rich Low_complexity Low_complexity 4 127 0 1723 170 0 3 chr10 480515 480798 -145108490 - AluJb SINE Alu -25 287 6 1807 154 7 36 chr10 483720 484026 -145105262 + AluSx SINE Alu 1 297 -15 203 114 23 0 chr10 484885 484929 -145104359 + T-rich Low_complexity Low_complexity 3 47 0 266 254 10 83 chr10 485799 485992 -145103296 + (CATA)n Simple_repeat Simple_repeat 1 179 0 288 287 25 32 chr10 486284 486441 -145102847 + (CATA)n Simple_repeat Simple_repeat 3 158 0 266 297 22 33 chr10 486507 486689 -145102599 + (CATA)n Simple_repeat Simple_repeat 1 180 0 329 253 28 55 chr10 486799 486981 -145102307 + (CATA)n Simple_repeat Simple_repeat 3 179 0 * 355 251 40 29 chr10 486860 487035 -145102253 + (CATATA)n Simple_repeat Simple_repeat 4 180 0 346 264 22 50 chr10 487157 487339 -145101949 + (CATATA)n Simple_repeat Simple_repeat 3 179 0 246 325 24 30 chr10 487280 487446 -145101842 + (TATG)n Simple_repeat Simple_repeat 1 165 0 * 300 314 23 29 chr10 487458 487633 -145101655 + (CATATA)n Simple_repeat Simple_repeat 4 177 0 208 307 12 49 chr10 487602 487765 -145101523 + (CATA)n Simple_repeat Simple_repeat 1 157 0 * 1392 156 59 103 chr10 488965 489305 -145099983 - MER1B DNA MER1_type 0 339 15 1209 183 0 9 chr10 489479 489698 -145099590 + AluJo SINE Alu 89 305 -7 230 143 0 36 chr10 492751 492807 -145096481 - L1MA4 LINE L1 -295 6005 5952 235 321 36 0 chr10 494385 494469 -145094819 + MIR SINE MIR 86 172 -90 210 325 37 0 chr10 495199 495362 -145093926 + (CCCCAG)n Simple_repeat Simple_repeat 3 171 0 1079 296 83 33 chr10 495905 496698 -145092590 - L1ME LINE L1 -465 5699 4863 2261 101 0 10 chr10 498211 498517 -145090771 - AluSx SINE Alu -9 303 1 307 273 84 56 chr10 499497 499640 -145089648 + L1ME2 LINE L1 5731 5877 -289 270 111 44 0 chr10 500168 500213 -145089075 + Alu SINE Alu 1 47 -254 199 271 9 75 chr10 500585 500692 -145088596 + L2 LINE L2 2994 3093 -179 240 319 129 0 chr10 500863 500979 -145088309 + L2 LINE L2 3133 3263 -9 337 228 13 0 chr10 502403 502482 -145086806 - MER116 DNA Mariner 0 80 1 666 234 119 23 chr10 502712 502930 -145086358 + MER8 DNA MER2_type 1 239 0 2180 107 47 0 chr10 503320 503618 -145085670 + AluSq SINE Alu 2 313 0 667 284 147 29 chr10 504039 504489 -145084799 + MLT2B2 LTR ERVL 9 511 -4 224 267 0 0 chr10 505633 505693 -145083595 + C-rich Low_complexity Low_complexity 2 61 0 971 258 192 2 chr10 508795 509249 -145080039 - MER92B LTR ERV1 -96 540 1 769 232 135 12 chr10 509483 509742 -145079546 + MLT1A1 LTR MaLR 2 292 -73 958 110 0 7 chr10 510286 510422 -145078866 + AluSg/x SINE Alu 175 309 -1 282 197 159 114 chr10 510810 510942 -145078346 - MLT1E2 LTR MaLR 0 626 489 306 262 63 0 chr10 510970 511096 -145078192 + (CCCCAG)n Simple_repeat Simple_repeat 4 137 0 757 183 0 7 chr10 511600 511737 -145077551 + AluSg/x SINE Alu 177 312 0 282 197 159 114 chr10 512130 512262 -145077026 - MLT1E2 LTR MaLR 0 626 489 377 262 49 12 chr10 512290 512454 -145076834 + (CCCCAG)n Simple_repeat Simple_repeat 4 173 0 560 234 36 12 chr10 512460 512627 -145076661 - MLT1D LTR MaLR -263 242 72 394 216 0 34 chr10 515930 516018 -145073270 - Tigger5 DNA MER2_type -3 2320 2236 243 260 41 27 chr10 516076 516149 -145073139 - Tigger5 DNA MER2_type -2249 74 1 390 165 15 8 chr10 516513 516646 -145072642 + (CA)n Simple_repeat Simple_repeat 2 135 0 1724 253 88 9 chr10 517939 518505 -145070783 + L1MA4 LINE L1 5690 6300 0 681 112 9 0 chr10 518559 518666 -145070622 + MSTA LTR MaLR 2 109 -319 359 70 18 0 chr10 518670 518727 -145070561 + MSTA LTR MaLR 52 109 -319 359 70 18 0 chr10 518731 518788 -145070500 + MSTA LTR MaLR 52 109 -319 359 103 20 13 chr10 518779 518856 -145070432 + MSTA LTR MaLR 45 119 -256 301 123 18 0 chr10 518853 518910 -145070378 + MSTA LTR MaLR 52 109 -319 * 322 98 0 0 chr10 518914 518965 -145070323 + MSTA LTR MaLR 52 102 -326 1609 138 163 9 chr10 518967 519292 -145069996 + MSTA LTR MaLR 45 419 -9 1964 105 17 3 chr10 519929 520223 -145069065 + AluSx SINE Alu 1 298 -14 204 135 27 0 chr10 523525 523562 -145065726 + (CA)n Simple_repeat Simple_repeat 1 38 0 240 329 0 0 chr10 525269 525339 -145063949 + MIR SINE MIR 118 187 -75 792 237 103 9 chr10 527142 527366 -145061922 - MLT1D LTR MaLR -5 500 256 645 137 20 26 chr10 530175 530328 -145058960 + GA-rich Low_complexity Low_complexity 1 152 0 200 246 35 0 chr10 530482 530539 -145058749 + (CTATT)n Simple_repeat Simple_repeat 1 59 0 210 367 0 0 chr10 532380 532557 -145056731 + (CTGGGG)n Simple_repeat Simple_repeat 4 180 0 266 180 16 0 chr10 533106 533167 -145056121 + (CA)n Simple_repeat Simple_repeat 1 62 0 394 273 48 12 chr10 533200 533365 -145055923 + (CATA)n Simple_repeat Simple_repeat 2 172 0 295 214 14 28 chr10 533401 533546 -145055742 + (CATA)n Simple_repeat Simple_repeat 4 146 0 187 354 152 15 chr10 537328 537526 -145051762 + L3b LINE CR1 1109 1333 -250 182 211 26 0 chr10 537563 537601 -145051687 + L3b LINE CR1 1422 1460 -123 216 324 29 0 chr10 538649 538717 -145050571 - L2 LINE L2 -8 3264 3195 247 265 0 33 chr10 539300 539581 -145049707 + GA-rich Low_complexity Low_complexity 1 271 0 266 316 105 7 chr10 543870 544022 -145045266 - MIR SINE MIR -45 217 51 594 234 60 43 chr10 544093 544277 -145045011 + LTR55 LTR ERV 1 187 -361 240 167 179 12 chr10 544663 544747 -145044541 - MER20 DNA MER1_type -55 164 67 234 343 0 0 chr10 545875 545948 -145043340 + MIR3 SINE MIR 124 196 -12 29 28 0 0 chr10 547039 547075 -145042213 + AT_rich Low_complexity Low_complexity 1 36 0 1395 127 5 5 chr10 550409 550621 -145038667 + AluSq SINE Alu 102 313 0 291 307 24 8 chr10 552136 552263 -145037025 - L1MC4 LINE L1 0 8042 7914 283 250 0 42 chr10 553019 553091 -145036197 - MLT1A1 LTR MaLR 0 365 297 294 236 0 42 chr10 553098 553170 -145036118 - MLT1A1 LTR MaLR 0 365 297 1668 188 47 9 chr10 553177 553517 -145035771 - MLT1A1 LTR MaLR 0 365 13 192 305 105 11 chr10 555557 555652 -145033636 - MIR SINE MIR -91 171 68 431 345 0 0 chr10 556418 556595 -145032693 + G-rich Low_complexity Low_complexity 2 178 0 1554 142 38 11 chr10 557619 557886 -145031402 + AluJo SINE Alu 33 306 -6 276 254 82 45 chr10 558077 558211 -145031077 - MER5A DNA MER1_type 0 189 51 1934 107 7 52 chr10 558761 559070 -145030218 + AluSx SINE Alu 1 295 -17 2302 78 3 3 chr10 559072 559378 -145029910 + AluY SINE Alu 1 306 -5 351 310 0 26 chr10 560933 561046 -145028242 + HAL1b LINE L1 376 485 -863 891 238 36 0 chr10 567719 567942 -145021346 + MER8 DNA MER2_type 9 239 0 2242 122 3 3 chr10 569005 569317 -145019971 + AluSx SINE Alu 1 312 0 245 215 11 0 chr10 570691 570784 -145018504 + (CTATA)n Simple_repeat Simple_repeat 1 94 0 729 146 132 6 chr10 570796 571001 -145018287 + MER61D LTR ERV1 1 218 -216 756 119 9 0 chr10 571115 571224 -145018064 - AluSq/x SINE Alu -200 112 3 216 0 0 0 chr10 573187 573211 -145016077 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 190 211 26 0 chr10 574840 574878 -145014410 - L3b LINE CR1 -123 1460 1422 189 349 152 15 chr10 574915 575113 -145014175 - L3b LINE CR1 -250 1333 1109 295 214 14 28 chr10 578895 579040 -145010248 + (TATG)n Simple_repeat Simple_repeat 4 146 0 394 273 48 12 chr10 579076 579241 -145010047 + (TATG)n Simple_repeat Simple_repeat 2 172 0 266 180 16 0 chr10 579274 579335 -145009953 + (TG)n Simple_repeat Simple_repeat 1 62 0 210 367 0 0 chr10 579884 580061 -145009227 + (CCCCAG)n Simple_repeat Simple_repeat 4 180 0 200 112 0 155 chr10 580772 580933 -145008355 + (CAGGT)n Simple_repeat Simple_repeat 1 136 0 3547 162 10 13 chr10 581089 581805 -145007483 + L1 LINE L1 3752 4465 -1681 1945 148 21 0 chr10 581816 582148 -145007140 + L1MA5 LINE L1 5960 6298 -2 645 214 20 70 chr10 583676 583877 -145005411 - MLT1J LTR MaLR -82 429 239 290 228 219 44 chr10 583904 584018 -145005270 - MER5A DNA MER1_type -7 182 49 240 299 13 13 chr10 584035 584112 -145005176 - MLT1J LTR MaLR -298 213 137 255 232 85 6 chr10 584275 584439 -145004849 + (CA)n Simple_repeat Simple_repeat 2 178 0 368 201 88 0 chr10 584480 584639 -145004649 + (CA)n Simple_repeat Simple_repeat 2 174 0 299 186 32 85 chr10 584550 584738 -145004550 + (CACAA)n Simple_repeat Simple_repeat 2 179 0 * 368 355 0 0 chr10 586137 586244 -145003044 + (CA)n Simple_repeat Simple_repeat 1 107 0 543 276 0 0 chr10 586269 586439 -145002849 + (CA)n Simple_repeat Simple_repeat 1 170 0 242 296 82 10 chr10 587569 587667 -145001621 - MIR SINE MIR -65 197 93 24 0 0 0 chr10 590278 590302 -144998986 + AT_rich Low_complexity Low_complexity 1 24 0 2511 80 0 3 chr10 592456 592767 -144996521 + AluSq SINE Alu 1 310 -3 402 21 0 0 chr10 592767 592814 -144996474 + (TA)n Simple_repeat Simple_repeat 2 48 0 180 0 0 0 chr10 593258 593278 -144996010 + (TAA)n Simple_repeat Simple_repeat 2 21 0 2081 131 10 0 chr10 593287 593584 -144995704 + AluSx SINE Alu 3 302 -10 2292 99 0 7 chr10 597664 597956 -144991332 + AluSg SINE Alu 1 290 -20 303 28 0 0 chr10 597956 597992 -144991296 + (TA)n Simple_repeat Simple_repeat 2 37 0 2287 109 0 3 chr10 604199 604503 -144984785 - AluSx SINE Alu -9 303 1 264 54 0 27 chr10 604544 604581 -144984707 + U6 snRNA snRNA 1 36 -71 1355 219 61 48 chr10 604590 604657 -144984631 - MLT1C LTR MaLR 0 467 402 1409 174 77 43 chr10 604657 604956 -144984332 + AluJo SINE Alu 1 309 -3 1355 219 61 48 chr10 604956 605349 -144983939 - MLT1C LTR MaLR -65 402 1 234 247 26 13 chr10 606135 606289 -144982999 + (TG)n Simple_repeat Simple_repeat 1 156 0 317 269 150 57 chr10 606509 606702 -144982586 + HAL1 LINE L1 1912 2122 -385 413 248 113 28 chr10 606710 606851 -144982437 - L1ME LINE L1 -4142 2254 2102 1264 292 112 45 chr10 606866 607916 -144981372 - L1ME LINE L1 -4452 1944 765 4210 126 31 19 chr10 607916 608085 -144981203 - L1MA3 LINE L1 0 6305 6140 2297 103 3 3 chr10 608085 608385 -144980903 - AluSq SINE Alu -9 304 5 4210 126 31 19 chr10 608385 608945 -144980343 - L1MA3 LINE L1 -165 6140 5567 1264 292 112 45 chr10 608945 609052 -144980236 - L1ME LINE L1 -5631 765 667 316 309 78 78 chr10 609389 609619 -144979669 - L1ME LINE L1 -5992 404 175 2115 155 0 0 chr10 609654 609964 -144979324 - AluSg SINE Alu 0 310 1 429 210 89 85 chr10 610168 610429 -144978859 + HAL1 LINE L1 1860 2243 -264 980 120 0 0 chr10 610429 610562 -144978726 + FLAM_C SINE Alu 1 133 0 429 210 89 85 chr10 610562 610666 -144978622 + HAL1 LINE L1 2243 2345 -162 2556 84 0 0 chr10 610669 610979 -144978309 + AluY SINE Alu 1 310 -1 303 254 25 82 chr10 611273 611395 -144977893 - L1ME3 LINE L1 -83 6062 5948 394 215 91 59 chr10 611443 611677 -144977611 - L1ME2 LINE L1 -214 5939 5682 709 268 59 74 chr10 611796 612456 -144976832 - L1ME2 LINE L1 -1317 4812 4163 * 3693 229 121 15 chr10 612455 613483 -144975805 - MSTD-int LTR MaLR -597 1138 2 629 114 5 0 chr10 613493 613597 -144975691 - ALR/Alpha Satellite centromeric -20 151 47 1603 149 221 0 chr10 613597 613905 -144975383 - MSTD LTR MaLR -20 376 1 224 196 0 39 chr10 614107 614158 -144975130 + A-rich Low_complexity Low_complexity 2 50 0 1161 280 82 65 chr10 614316 614638 -144974650 - L1ME2 LINE L1 -2369 3760 3445 954 73 0 22 chr10 614638 614774 -144974514 - L1PA4 LINE L1 0 6155 6023 1161 280 82 65 chr10 614774 615890 -144973398 - L1ME2 LINE L1 -2684 3445 2297 492 281 53 115 chr10 615903 616048 -144973240 - L1ME2 LINE L1 -5073 1046 894 1488 186 0 11 chr10 616048 616312 -144972976 - AluJo SINE Alu -51 261 1 492 281 53 115 chr10 616312 616610 -144972678 - L1ME2 LINE L1 -5225 894 602 239 296 68 68 chr10 616692 616868 -144972420 - L1ME2 LINE L1 -5499 620 445 1301 159 4 35 chr10 617246 617393 -144971895 + AluJb SINE Alu 1 140 -172 2581 100 22 14 chr10 617393 617754 -144971534 + THE1B LTR MaLR 1 364 0 1301 159 4 35 chr10 617754 617838 -144971450 + AluJb SINE Alu 140 225 -87 253 254 0 0 chr10 617838 617897 -144971391 + AluSp/q SINE Alu 178 236 -67 654 198 0 33 chr10 617931 618052 -144971236 + AluSg/x SINE Alu 175 291 -21 250 279 95 62 chr10 618410 618589 -144970699 - MIR3 SINE MIR -1 207 23 324 326 133 15 chr10 619039 619235 -144970053 - L1ME3A LINE L1 -28 6142 5924 864 127 0 0 chr10 619325 619451 -144969837 - FLAM_C SINE Alu -17 126 1 1218 300 54 35 chr10 619459 620318 -144968970 - L1ME3A LINE L1 -264 5906 5032 750 272 80 77 chr10 620345 620933 -144968355 + L1ME LINE L1 6 595 -5475 1568 316 71 60 chr10 621082 621142 -144968146 - L1ME3A LINE L1 -1123 5023 4965 2145 115 3 6 chr10 621142 621455 -144967833 - AluSx SINE Alu 0 312 1 1568 316 71 60 chr10 621455 622055 -144967233 - L1ME3A LINE L1 -1181 4965 4373 2034 124 0 0 chr10 622055 622346 -144966942 - AluSc SINE Alu -18 291 1 1568 316 71 60 chr10 622346 623125 -144966163 - L1ME3A LINE L1 -1773 4373 3567 2037 109 0 0 chr10 624988 625263 -144964025 + AluSx SINE Alu 1 275 -37 180 0 0 0 chr10 625266 625286 -144964002 + (TAA)n Simple_repeat Simple_repeat 2 21 0 23 0 0 0 chr10 626773 626796 -144962492 + AT_rich Low_complexity Low_complexity 1 23 0 456 248 43 0 chr10 627065 627182 -144962106 + L1 LINE L1 5113 5234 -912 * 2597 33 0 0 chr10 627182 627483 -144961805 - AluY SINE Alu -10 301 1 769 185 53 21 chr10 627483 627662 -144961626 + L1MA9 LINE L1 6125 6312 0 242 333 19 0 chr10 627831 627939 -144961349 - L1ME LINE L1 -382 5739 5630 387 316 44 7 chr10 628646 628782 -144960506 - L2 LINE L2 -1 3312 3172 323 283 20 30 chr10 629612 629711 -144959577 - L2 LINE L2 -1 3271 3174 1880 104 11 11 chr10 629980 630110 -144959178 + AluSq SINE Alu 4 133 -180 1991 138 13 0 chr10 630110 630415 -144958873 + AluSp SINE Alu 1 309 -4 1880 104 11 11 chr10 630415 630562 -144958726 + AluSq SINE Alu 132 281 -32 194 0 39 0 chr10 630562 630588 -144958700 + (TAAAA)n Simple_repeat Simple_repeat 5 31 0 235 351 0 47 chr10 632087 632258 -144957030 + (CCCA)n Simple_repeat Simple_repeat 3 165 0 360 307 0 45 chr10 632273 632449 -144956839 + (CCCA)n Simple_repeat Simple_repeat 3 170 0 1976 138 6 3 chr10 633605 633916 -144955372 + AluSx SINE Alu 1 312 0 372 295 35 0 chr10 634318 634491 -144954797 + (CCCTG)n Simple_repeat Simple_repeat 2 180 0 382 278 35 0 chr10 634577 634750 -144954538 + (CCCTG)n Simple_repeat Simple_repeat 2 180 0 223 347 13 0 chr10 634810 634885 -144954403 - MER91B DNA MER1_type -60 130 55 2386 75 0 0 chr10 635626 635931 -144953357 - AluSc SINE Alu -4 305 1 1872 179 7 0 chr10 636913 637221 -144952067 + AluJo SINE Alu 1 310 -2 3526 174 58 8 chr10 637231 637886 -144951402 + L1PA16 LINE L1 5476 6163 -3 324 294 14 21 chr10 638064 638207 -144951081 - HAL1b LINE L1 -1 1347 1206 335 180 20 47 chr10 638766 638916 -144950372 + CT-rich Low_complexity Low_complexity 3 148 0 272 221 9 0 chr10 639047 639160 -144950128 + (TG)n Simple_repeat Simple_repeat 1 114 0 4754 180 96 5 chr10 639276 640894 -144948394 + L1PB4 LINE L1 4369 6153 -3 2105 88 15 0 chr10 642853 643220 -144946068 - AluSx SINE Alu 0 375 5 258 241 37 0 chr10 643376 643430 -144945858 + MER5A DNA MER1_type 109 164 -25 238 236 42 14 chr10 644985 645057 -144944231 + LTR16C LTR ERVL 406 479 -12 238 229 43 14 chr10 645061 645131 -144944157 + LTR16C LTR ERVL 408 479 -12 251 257 40 0 chr10 645135 645209 -144944079 + LTR16C LTR ERVL 408 484 -7 779 224 52 5 chr10 648068 648260 -144941028 + L1MB3 LINE L1 5470 5670 -501 1574 184 14 20 chr10 648260 648411 -144940877 - AluJo SINE Alu -16 296 146 2740 95 16 0 chr10 648411 648780 -144940508 + THE1C LTR MaLR 1 375 0 1574 184 14 20 chr10 648780 648921 -144940367 - AluJo SINE Alu -166 146 6 1851 204 136 0 chr10 648921 649376 -144939912 + L1MB3 LINE L1 5657 6173 -10 853 181 6 6 chr10 652991 653151 -144936137 - AluJb SINE Alu -22 290 131 400 298 133 12 chr10 653720 653996 -144935292 + MLT1A2 LTR MaLR 5 322 -52 2407 75 0 3 chr10 654255 654562 -144934726 - AluSx SINE Alu -4 308 3 1287 140 229 0 chr10 657215 657451 -144931837 + AluJo SINE Alu 1 290 -12 322 317 0 0 chr10 658290 658683 -144930605 + (TG)n Simple_repeat Simple_repeat 1 393 0 1092 166 0 10 chr10 659227 659420 -144929868 + AluJb SINE Alu 116 306 -6 349 222 218 56 chr10 660096 660330 -144928958 + L1M4 LINE L1 4297 4568 -1578 494 264 88 0 chr10 660969 661117 -144928171 + L1M4 LINE L1 4552 4712 -1434 6510 138 36 12 chr10 661118 661805 -144927483 + L1P4 LINE L1 1190 1916 -4933 2100 181 89 26 chr10 661805 662264 -144927024 + LTR2B LTR ERV1 3 490 0 6510 138 36 12 chr10 662264 662703 -144926585 + L1P4 LINE L1 1916 2343 -4506 2572 116 6 3 chr10 662704 663067 -144926221 + THE1B LTR MaLR 1 364 0 5330 106 83 60 chr10 663067 663982 -144925306 + THE1B-int LTR MaLR 1 936 -644 4428 122 47 56 chr10 663951 664658 -144924630 - THE1B-int LTR MaLR -833 747 46 * 2008 120 3 20 chr10 664658 664959 -144924329 - AluSq SINE Alu -17 296 1 4428 122 47 56 chr10 664959 665004 -144924284 - THE1B-int LTR MaLR -1534 46 2 2492 107 19 25 chr10 665005 665370 -144923918 - THE1B LTR MaLR 0 364 2 5376 233 109 10 chr10 665378 665435 -144923853 + L1P4 LINE L1 2348 2398 -4451 405 0 0 0 chr10 665435 665480 -144923808 + (CA)n Simple_repeat Simple_repeat 2 46 0 5376 233 109 10 chr10 665480 667261 -144922027 + L1P4 LINE L1 2398 4371 -2478 4189 161 26 56 chr10 667259 667474 -144921814 + L1P4 LINE L1 5035 5255 -1614 * 2224 82 0 16 chr10 667474 667779 -144921509 - AluY SINE Alu -10 301 2 4189 161 26 56 chr10 667779 668742 -144920546 + L1P4 LINE L1 5255 6163 -706 1705 175 0 7 chr10 668742 669034 -144920254 - AluJo SINE Alu -22 290 1 4189 161 26 56 chr10 669034 669123 -144920165 + L1P4 LINE L1 6163 6253 -616 246 227 82 27 chr10 669490 669600 -144919688 + Charlie5 DNA MER1_type 2441 2556 -56 266 227 61 0 chr10 670746 670812 -144918476 + MER116 DNA Mariner 1 70 -10 192 216 0 0 chr10 671438 671475 -144917813 + L2 LINE L2 1877 1913 -1401 238 209 166 72 chr10 672921 673060 -144916228 + MLT1L LTR MaLR 41 192 -423 401 311 77 23 chr10 673590 673877 -144915411 + L1MEc LINE L1 2219 2525 -3690 343 293 38 9 chr10 674970 675076 -144914212 - L2 LINE L2 -10 3262 3154 474 189 0 0 chr10 675721 675832 -144913456 + GA-rich Low_complexity Low_complexity 3 113 0 367 266 127 11 chr10 676635 676902 -144912386 + L1M4 LINE L1 5062 5359 -787 21 0 0 0 chr10 677352 677373 -144911915 + AT_rich Low_complexity Low_complexity 1 21 0 26 50 0 0 chr10 679633 679673 -144909615 + AT_rich Low_complexity Low_complexity 1 40 0 23 0 0 0 chr10 680833 680856 -144908432 + GC_rich Low_complexity Low_complexity 1 23 0 2053 114 0 7 chr10 681643 681942 -144907346 - AluSc SINE Alu -12 297 1 191 59 0 29 chr10 681946 681980 -144907308 + (TTA)n Simple_repeat Simple_repeat 1 33 0 288 272 41 20 chr10 683378 683528 -144905760 - MIR SINE MIR -57 151 17 2073 119 0 0 chr10 683788 684081 -144905207 + AluSx SINE Alu 1 293 -19 24 0 0 0 chr10 686302 686326 -144902962 + AT_rich Low_complexity Low_complexity 1 24 0 185 271 21 0 chr10 689491 689539 -144899749 - MIR3 SINE MIR -27 181 133 507 293 55 6 chr10 689577 689741 -144899547 + ERVL LTR ERVL 3223 3394 -2370 306 288 159 6 chr10 691288 691458 -144897830 + LTR50 LTR ERVL 14 209 -586 1643 183 0 0 chr10 692051 692366 -144896922 + AluJo SINE Alu 1 315 0 26 0 0 0 chr10 692842 692868 -144896420 + AT_rich Low_complexity Low_complexity 1 26 0 2226 71 0 7 chr10 694833 695130 -144894158 + AluY SINE Alu 1 295 -16 189 0 0 0 chr10 699117 699138 -144890150 + (T)n Simple_repeat Simple_repeat 1 21 0 355 247 113 20 chr10 699168 699318 -144889970 + L1ME1 LINE L1 36 199 -6197 1621 208 124 47 chr10 699390 699872 -144889416 + L1ME1 LINE L1 469 1007 -5389 2487 58 0 0 chr10 699872 700183 -144889105 - AluY SINE Alu 0 311 1 1621 208 124 47 chr10 700183 700297 -144888991 + L1ME1 LINE L1 1007 1111 -5285 1263 247 138 23 chr10 700365 700892 -144888396 + L1ME1 LINE L1 1392 1979 -4417 1388 104 0 45 chr10 700986 701208 -144888080 + MER30 DNA MER1_type 2 213 -17 1241 198 87 43 chr10 701218 701450 -144887838 + L1ME1 LINE L1 2057 2277 -4119 2169 105 3 0 chr10 701450 701754 -144887534 + AluSc SINE Alu 1 305 -4 1241 198 87 43 chr10 701754 701960 -144887328 + L1ME1 LINE L1 2277 2514 -3882 401 21 0 0 chr10 702710 702757 -144886531 + AluSg SINE Alu 2 48 -262 1074 72 0 0 chr10 702757 702895 -144886393 + AluSg/x SINE Alu 160 297 -15 1793 108 0 0 chr10 703539 703789 -144885499 + AluSg SINE Alu 47 296 -14 28 61 0 0 chr10 703959 704008 -144885280 + AT_rich Low_complexity Low_complexity 1 49 0 414 292 60 0 chr10 704892 705060 -144884228 + L1ME1 LINE L1 3337 3514 -2701 940 292 73 10 chr10 705099 705507 -144883781 + L1ME1 LINE L1 4492 4925 -1290 691 258 55 19 chr10 705553 705824 -144883464 + L1ME1 LINE L1 5026 5306 -909 6106 181 34 6 chr10 705875 707276 -144882012 + L1MC1 LINE L1 4885 6328 -5 2215 235 110 31 chr10 707287 708097 -144881191 + L1ME1 LINE L1 5355 6228 -7 24 32 0 0 chr10 708304 708335 -144880953 + AT_rich Low_complexity Low_complexity 1 31 0 1818 152 3 7 chr10 708709 709005 -144880283 + AluSx SINE Alu 1 295 -17 1963 132 3 3 chr10 710039 710335 -144878953 - AluSc SINE Alu -13 296 1 2234 105 0 0 chr10 711256 711561 -144877727 + AluSq SINE Alu 1 305 -8 457 303 114 56 chr10 714019 714432 -144874856 - L2 LINE L2 -9 3263 2827 367 296 151 29 chr10 714639 714946 -144874342 - L2 LINE L2 -1152 2162 1807 588 299 91 48 chr10 715210 715357 -144873931 + L1MC1 LINE L1 40 179 -6217 2294 80 0 39 chr10 715357 715668 -144873620 - AluSg SINE Alu -11 299 1 588 299 91 48 chr10 715668 716039 -144873249 + L1MC1 LINE L1 179 580 -5816 1655 255 103 7 chr10 716041 716625 -144872663 + L1MC1 LINE L1 607 1246 -5150 556 332 40 12 chr10 716662 716984 -144872304 + L1MC1 LINE L1 1760 2090 -4306 1472 175 183 99 chr10 717056 717424 -144871864 + L1MD3 LINE L1 6701 7036 -959 254 253 0 13 chr10 717424 717499 -144871789 + MLT1F1 LTR MaLR 52 125 -442 1472 175 183 99 chr10 717499 718022 -144871266 + L1MD3 LINE L1 7036 7983 -12 6256 253 108 30 chr10 718026 719020 -144870268 + L1MC1 LINE L1 2179 3094 -3121 2213 114 0 0 chr10 719020 719319 -144869969 - AluSx SINE Alu -9 303 5 6256 253 108 30 chr10 719319 719626 -144869662 + L1MC1 LINE L1 3094 3376 -2839 1731 164 4 4 chr10 719626 719901 -144869387 + AluJb SINE Alu 5 279 -33 6256 253 108 30 chr10 719901 721035 -144868253 + L1MC1 LINE L1 3376 4853 -1362 14068 145 49 15 chr10 721035 721241 -144868047 - Tigger1 DNA MER2_type 0 2418 2220 1999 158 0 0 chr10 721241 721544 -144867744 + AluSx SINE Alu 1 303 -9 14068 145 49 15 chr10 721544 723673 -144865615 - Tigger1 DNA MER2_type -198 2220 4 6256 253 108 30 chr10 723673 723960 -144865328 + L1MC1 LINE L1 4853 5116 -1099 230 239 147 0 chr10 724076 724185 -144865103 + L1MC1 LINE L1 5323 5447 -2407 4849 195 49 12 chr10 724195 725247 -144864041 + L1MCa LINE L1 30 1120 -5306 338 85 0 0 chr10 725265 725312 -144863976 + MER39B LTR ERV1 1 47 -606 1163 133 133 18 chr10 725324 725550 -144863738 + LTR49-int LTR ERV1 375 626 -5705 * 1542 167 141 95 chr10 725548 726032 -144863256 + LTR49-int LTR ERV1 751 1256 -5075 2167 216 62 4 chr10 726034 726709 -144862579 + L1M3 LINE L1 4788 5491 -692 979 118 0 0 chr10 726709 726844 -144862444 + AluSq/x SINE Alu 1 135 -177 2047 118 28 0 chr10 726844 727131 -144862157 + AluSg SINE Alu 1 295 -15 944 141 0 25 chr10 727132 727295 -144861993 + L1M3 LINE L1 5483 5641 -542 4867 152 6 17 chr10 727295 728064 -144861224 + L1MC1 LINE L1 5632 6402 0 1689 234 58 29 chr10 728065 728581 -144860707 + L1ME2 LINE L1 5390 5920 -244 233 200 83 0 chr10 728581 728641 -144860647 + FRAM/FAM SINE Alu 15 79 -87 2360 82 0 0 chr10 728714 729008 -144860280 + AluY SINE Alu 1 294 -17 225 0 0 0 chr10 730096 730121 -144859167 + (A)n Simple_repeat Simple_repeat 1 25 0 2018 97 8 0 chr10 730357 730624 -144858664 + AluY SINE Alu 40 308 -3 2430 43 3 23 chr10 731066 731368 -144857920 - AluY SINE Alu -15 296 1 21 0 0 0 chr10 731516 731537 -144857751 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 732257 732278 -144857010 + AT_rich Low_complexity Low_complexity 1 21 0 2208 103 7 0 chr10 732511 732813 -144856475 + AluSx SINE Alu 1 304 -8 304 307 82 39 chr10 733214 733445 -144855843 + L2 LINE L2 2718 2958 -356 191 327 36 36 chr10 734747 734857 -144854431 + L2 LINE L2 3204 3313 0 21 36 0 0 chr10 734858 734886 -144854402 + AT_rich Low_complexity Low_complexity 1 28 0 343 303 127 0 chr10 735073 735215 -144854073 - MIR SINE MIR -11 251 92 2252 123 0 3 chr10 735418 735726 -144853562 + AluSx SINE Alu 1 307 -5 21 0 0 0 chr10 736216 736237 -144853051 + AT_rich Low_complexity Low_complexity 1 21 0 1787 118 30 61 chr10 737445 737791 -144851497 + AluSx SINE Alu 1 337 0 270 326 11 0 chr10 741635 741727 -144847561 + L1MC4 LINE L1 7826 7918 -124 2131 98 0 11 chr10 741789 742099 -144847189 + AluSx SINE Alu 1 307 0 279 268 103 0 chr10 742767 742864 -144846424 - MIR SINE MIR -57 205 99 543 271 68 23 chr10 743003 743180 -144846108 + MIR SINE MIR 10 194 -68 666 180 34 4 chr10 743376 743525 -144845763 - MSTC LTR MaLR -9 419 271 651 186 6 51 chr10 743532 743688 -144845600 - MSTC LTR MaLR -247 149 1 3640 212 48 60 chr10 743699 743943 -144845345 - MSTC-int LTR MaLR -13 1722 1476 2165 112 10 7 chr10 743943 744248 -144845040 + AluSp SINE Alu 1 306 -7 3640 212 48 60 chr10 744248 745027 -144844261 - MSTC-int LTR MaLR -259 1476 712 1051 186 0 0 chr10 745074 745235 -144844053 + FRAM SINE Alu 1 161 -5 803 164 21 21 chr10 745344 745484 -144843804 + MIR SINE MIR 22 161 -101 590 250 202 27 chr10 745609 746194 -144843094 - L2 LINE L2 -15 3298 2601 357 276 19 0 chr10 746388 746493 -144842795 + L1ME3A LINE L1 6048 6154 -16 1609 148 114 4 chr10 747336 747607 -144841681 - AluJb SINE Alu -1 301 1 2527 73 0 0 chr10 747612 747913 -144841375 - AluSq SINE Alu -12 301 1 1978 125 10 14 chr10 748306 748602 -144840686 + AluSx SINE Alu 1 295 -17 241 140 88 35 chr10 748675 748732 -144840556 - L1 LINE L1 -3326 2820 2761 617 197 21 14 chr10 750016 750158 -144839130 + L1MB8 LINE L1 6027 6169 -9 1783 94 0 0 chr10 750292 750516 -144838772 - AluY SINE Alu -15 296 73 2211 103 6 6 chr10 751133 751444 -144837844 + AluSp SINE Alu 3 313 0 39 22 0 0 chr10 751463 751509 -144837779 + AT_rich Low_complexity Low_complexity 1 46 0 928 118 0 37 chr10 751553 751689 -144837599 + FLAM_C SINE Alu 1 131 -2 32 43 0 0 chr10 751763 751809 -144837479 + AT_rich Low_complexity Low_complexity 1 46 0 21 57 0 0 chr10 752067 752102 -144837186 + AT_rich Low_complexity Low_complexity 1 35 0 1487 207 119 14 chr10 752979 753409 -144835879 + MER39 LTR ERV1 232 706 -1 22 0 0 0 chr10 753711 753733 -144835555 + AT_rich Low_complexity Low_complexity 1 22 0 4702 166 48 45 chr10 753975 754018 -144835270 + L1MA9 LINE L1 5254 5295 -1017 198 0 0 0 chr10 754018 754040 -144835248 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 4702 166 48 45 chr10 754040 754710 -144834578 + L1MA9 LINE L1 5295 5961 -351 1990 122 11 0 chr10 754710 754988 -144834300 + AluSp SINE Alu 2 282 -31 183 42 0 0 chr10 754988 755012 -144834276 + (CA)n Simple_repeat Simple_repeat 1 24 0 4702 166 48 45 chr10 755012 755315 -144833973 + L1MA9 LINE L1 5960 6275 -37 1983 148 6 3 chr10 755329 755640 -144833648 + AluSx SINE Alu 1 312 0 1930 131 7 7 chr10 755643 755934 -144833354 + AluSx SINE Alu 1 291 -21 2058 133 7 7 chr10 755939 756247 -144833041 + AluSx SINE Alu 1 308 -4 3883 145 63 40 chr10 756377 756660 -144832628 - MER6 DNA MER2_type -75 790 515 1817 171 7 0 chr10 756660 756969 -144832319 + AluJb SINE Alu 1 311 -1 3883 145 63 40 chr10 756969 757450 -144831838 - MER6 DNA MER2_type -350 515 9 1715 109 40 8 chr10 757553 757801 -144831487 + AluSx SINE Alu 31 286 -26 183 42 0 0 chr10 758565 758589 -144830699 + (TTA)n Simple_repeat Simple_repeat 1 24 0 608 238 241 52 chr10 758949 759521 -144829767 + L1MC5 LINE L1 7246 7925 -36 2526 55 0 0 chr10 760567 760860 -144828428 - AluY SINE Alu -17 294 2 1975 131 10 29 chr10 760925 761239 -144828049 - AluSx SINE Alu -4 308 1 694 276 43 0 chr10 761500 761710 -144827578 - L1MD3 LINE L1 -170 7825 7607 580 239 81 125 chr10 762250 762916 -144826372 + L1MC5 LINE L1 7273 7909 -52 1963 119 3 7 chr10 762926 763262 -144826026 + AluSx SINE Alu 1 335 0 1410 142 123 26 chr10 763453 763721 -144825567 + AluSx SINE Alu 14 307 -5 23 33 0 0 chr10 763817 763847 -144825441 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr10 763935 763963 -144825325 + AT_rich Low_complexity Low_complexity 1 28 0 608 258 7 20 chr10 764191 764342 -144824946 + Charlie1 DNA MER1_type 2 150 -2611 * 1546 187 68 64 chr10 764326 764813 -144824475 + Charlie1 DNA MER1_type 2272 2760 -1 3526 204 18 63 chr10 764889 765729 -144823559 + L1ME LINE L1 4499 5250 -914 2359 117 0 0 chr10 765729 766038 -144823250 + AluSx SINE Alu 1 309 -3 3526 204 18 63 chr10 766038 766514 -144822774 + L1ME LINE L1 5250 5746 -418 199 321 199 0 chr10 766745 766876 -144822412 - MIR SINE MIR -34 228 72 490 103 15 0 chr10 768088 768156 -144821132 + AluS SINE Alu 2 70 -242 1205 84 0 0 chr10 768305 768447 -144820841 - AluSq/x SINE Alu -171 142 1 26 50 0 0 chr10 768458 768498 -144820790 + AT_rich Low_complexity Low_complexity 1 40 0 1033 203 0 0 chr10 769948 770130 -144819158 + AluJb SINE Alu 130 311 -1 2325 118 0 0 chr10 770302 770606 -144818682 + AluSx SINE Alu 1 304 -8 372 214 309 0 chr10 770606 770774 -144818514 - MLT1F1 LTR MaLR -159 408 189 335 228 43 54 chr10 771372 771464 -144817824 + L1ME LINE L1 5353 5443 -678 991 149 0 0 chr10 771628 771816 -144817472 + FRAM SINE Alu 1 40 0 2207 76 7 28 chr10 771928 772241 -144817047 + AluSq SINE Alu 1 307 0 352 143 0 0 chr10 773039 773095 -144816193 + AluSq/x SINE Alu 80 135 -167 2245 106 0 29 chr10 773095 773234 -144816054 + AluSx SINE Alu 1 142 -170 2595 63 3 0 chr10 773234 773536 -144815752 + AluSp SINE Alu 3 305 -8 2245 106 0 29 chr10 773536 773707 -144815581 + AluSx SINE Alu 142 302 -10 232 247 0 14 chr10 774613 774686 -144814602 - L1MC5 LINE L1 -184 7777 7706 1783 244 86 56 chr10 774826 774968 -144814320 - L1MC4 LINE L1 -117 7925 7789 2509 65 0 10 chr10 774968 775277 -144814011 + AluY SINE Alu 1 306 -5 1783 244 86 56 chr10 775277 775339 -144813949 - L1MC4 LINE L1 -253 7789 7730 2131 105 3 7 chr10 775339 775661 -144813627 + AluSx SINE Alu 3 312 0 1783 244 86 56 chr10 775661 776180 -144813108 - L1MC4 LINE L1 -312 7730 7166 2273 126 0 0 chr10 776180 776482 -144812806 + AluJb SINE Alu 1 302 -10 1783 244 86 56 chr10 776482 776662 -144812626 - L1MC4 LINE L1 -876 7166 6993 2055 121 3 16 chr10 776780 777085 -144812203 - AluSq SINE Alu -12 301 1 226 259 71 24 chr10 777295 777380 -144811908 + L2 LINE L2 3222 3310 -3 1920 99 19 83 chr10 777497 777810 -144811478 + AluSx SINE Alu 20 312 0 1817 161 34 10 chr10 779006 779304 -144809984 - AluJb SINE Alu -3 309 5 241 186 36 0 chr10 779542 779612 -144809676 - L1M3 LINE L1 -587 5593 5522 1145 187 22 85 chr10 779613 779902 -144809386 - L1MC/D LINE L1 -659 5583 5357 1504 161 120 0 chr10 779902 780169 -144809119 - AluJb SINE Alu -13 299 1 1145 187 22 85 chr10 780169 780516 -144808772 - L1MC/D LINE L1 -885 5357 4990 * 1680 250 37 50 chr10 780499 781358 -144807930 - L1MC/D LINE L1 -1397 4749 3951 2217 90 14 3 chr10 781360 781649 -144807639 + AluSx SINE Alu 1 292 -20 207 321 25 12 chr10 781963 782044 -144807244 + MIR3 SINE MIR 78 159 -49 2058 145 3 3 chr10 782215 782511 -144806777 - AluSx SINE Alu -16 296 1 2457 78 3 7 chr10 782957 783264 -144806024 - AluSp SINE Alu -7 306 1 2314 229 77 13 chr10 783547 783634 -144805654 - L1MD1 LINE L1 0 6242 6162 1855 106 4 4 chr10 783634 783888 -144805400 - AluSq SINE Alu -59 254 1 2314 229 77 13 chr10 783888 784478 -144804810 - L1MD1 LINE L1 -80 6162 5522 256 179 34 0 chr10 784534 784602 -144804686 - L1M3 LINE L1 -587 5593 5524 256 179 34 0 chr10 784599 784667 -144804621 - L1M3 LINE L1 -587 5593 5524 * 289 142 35 0 chr10 784664 784732 -144804556 - L1M3 LINE L1 -587 5593 5524 * 313 151 37 0 chr10 784729 784798 -144804490 - L1M3 LINE L1 -659 5583 5523 2409 46 23 29 chr10 787586 787892 -144801396 - AluY SINE Alu -7 304 1 2192 134 0 13 chr10 788397 788711 -144800577 - AluSx SINE Alu -2 310 1 22 0 0 0 chr10 788915 788937 -144800351 + AT_rich Low_complexity Low_complexity 1 22 0 1885 164 13 0 chr10 789037 789342 -144799946 - AluJb SINE Alu -3 309 1 432 324 0 22 chr10 790627 790809 -144798479 + (CCCA)n Simple_repeat Simple_repeat 1 178 0 365 343 0 17 chr10 790827 791008 -144798280 + (CCCA)n Simple_repeat Simple_repeat 1 178 0 350 210 28 39 chr10 791002 791183 -144798105 + CT-rich Low_complexity Low_complexity 2 180 0 * 1781 170 6 20 chr10 791282 791635 -144797653 + L1MC1 LINE L1 5798 6145 -188 2361 109 6 10 chr10 791671 791982 -144797306 + AluSx SINE Alu 2 311 -1 493 235 143 21 chr10 792073 792311 -144796977 + L1MCa LINE L1 31 297 -6129 650 85 21 0 chr10 792361 792455 -144796833 + L1MCa LINE L1 1780 1875 -4551 1053 89 19 0 chr10 792478 792635 -144796653 - MSTB1 LTR MaLR 0 432 273 276 127 36 0 chr10 792634 792689 -144796599 - MSTB1 LTR MaLR -103 329 273 * 261 143 36 0 chr10 792687 792743 -144796545 - MSTB1 LTR MaLR -102 330 273 * 294 107 36 0 chr10 792741 792797 -144796491 - MSTB1 LTR MaLR -102 330 273 241 132 38 0 chr10 792797 792850 -144796438 - MSTB1 LTR MaLR -104 328 274 1630 173 35 0 chr10 792850 793168 -144796120 - MSTB1 LTR MaLR -103 329 1 889 182 53 53 chr10 793173 793255 -144796033 - MLT1B LTR MaLR -163 227 146 2340 105 0 13 chr10 793255 793568 -144795720 + AluSp SINE Alu 1 309 -4 889 182 53 53 chr10 793568 793710 -144795578 - MLT1B LTR MaLR -243 147 3 196 288 17 0 chr10 793710 793769 -144795519 - L2 LINE L2 -1041 2273 2214 814 256 154 50 chr10 793783 794303 -144794985 + MLT1E1 LTR MaLR 69 642 -12 995 201 247 25 chr10 794898 795222 -144794066 - MSTD LTR MaLR 0 396 1 2329 98 0 0 chr10 795319 795616 -144793672 - AluSg SINE Alu -13 297 1 275 85 21 0 chr10 797293 797340 -144791948 + (TG)n Simple_repeat Simple_repeat 1 48 0 1997 161 0 3 chr10 797424 797729 -144791559 + AluJo SINE Alu 1 304 -8 1039 276 87 38 chr10 798165 798752 -144790536 + HAL1 LINE L1 574 1189 -1318 1885 88 0 4 chr10 799015 799253 -144790035 - AluSx SINE Alu -75 237 1 250 337 11 32 chr10 799321 799416 -144789872 + L3 LINE CR1 1482 1574 -3 674 327 77 23 chr10 800092 800441 -144788847 + L3 LINE CR1 900 1267 -310 2018 159 3 16 chr10 800699 801014 -144788274 + AluSx SINE Alu 1 311 -1 445 359 80 11 chr10 801447 801709 -144787579 + L3 LINE CR1 1297 1576 -1 420 313 16 1 chr10 802816 802976 -144786312 + L1ME LINE L1 7 169 -5901 1021 214 102 14 chr10 803102 803279 -144786009 + MSTD LTR MaLR 18 178 -187 2215 117 0 10 chr10 803279 803579 -144785709 - AluSq SINE Alu -16 297 1 1021 214 102 14 chr10 803579 803737 -144785551 + MSTD LTR MaLR 178 356 -9 2446 75 0 0 chr10 804610 804902 -144784386 - AluY SINE Alu -19 292 1 268 346 73 0 chr10 805689 805825 -144783463 + MIR SINE MIR 63 208 -54 185 328 164 8 chr10 805985 806107 -144783181 + MIR SINE MIR 122 262 0 309 241 58 11 chr10 806566 806653 -144782635 + L2 LINE L2 3174 3264 -8 1441 158 39 0 chr10 808383 808650 -144780638 - AluJb SINE Alu 0 321 46 1031 157 0 35 chr10 808653 808825 -144780463 + AluJb SINE Alu 147 312 0 422 136 0 0 chr10 808820 808879 -144780409 - AluJb SINE Alu -247 65 7 * 1379 137 26 0 chr10 808890 809116 -144780172 - MER2 DNA MER2_type -112 233 2 314 191 59 112 chr10 809342 809494 -144779794 - L1MEc LINE L1 -2872 3257 3114 518 283 108 36 chr10 809638 809861 -144779427 - L1MEc LINE L1 -4134 2176 1938 344 308 31 54 chr10 810015 810354 -144778934 - L1MEc LINE L1 -861 1629 1325 364 254 65 43 chr10 810375 810513 -144778775 - L1MEc LINE L1 -4909 1210 1070 925 284 104 7 chr10 810528 810940 -144778348 + LTR33 LTR ERVL 2 453 -68 2296 89 0 0 chr10 810940 811220 -144778068 + AluY SINE Alu 1 280 -31 8434 156 22 4 chr10 811220 812659 -144776629 - MLT1A2-int LTR MaLR -186 1465 1 608 129 0 0 chr10 812661 812754 -144776534 - MSTB LTR MaLR -333 93 1 2179 119 10 0 chr10 812813 813116 -144776172 - AluSg SINE Alu -4 306 1 1841 133 91 3 chr10 813355 813641 -144775647 - AluSx SINE Alu -1 311 1 24 0 0 0 chr10 813653 813677 -144775611 + AT_rich Low_complexity Low_complexity 1 24 0 303 228 114 57 chr10 814604 814634 -144774654 + MLT1I LTR MaLR 280 307 -102 1428 201 28 76 chr10 814634 815027 -144774261 - MLT1A2 LTR MaLR 0 374 1 303 228 114 57 chr10 815027 815119 -144774169 + MLT1I LTR MaLR 307 409 0 22 35 0 0 chr10 815167 815196 -144774092 + AT_rich Low_complexity Low_complexity 1 29 0 1385 139 0 42 chr10 815966 816182 -144773106 + AluSg/x SINE Alu 74 307 0 181 111 0 0 chr10 816182 816209 -144773079 + (TAAA)n Simple_repeat Simple_repeat 4 180 0 245 340 65 22 chr10 816259 816436 -144772852 + MIR SINE MIR 10 193 -67 197 315 67 0 chr10 816600 816695 -144772593 + MIR SINE MIR 150 250 -12 187 295 67 19 chr10 817053 817158 -144772130 - L2 LINE L2 -3 3269 3160 2122 95 3 3 chr10 817918 818214 -144771074 + AluSx SINE Alu 11 306 -6 358 266 101 0 chr10 818472 818581 -144770707 + L3 LINE CR1 664 783 -794 549 228 151 53 chr10 818667 818873 -144770415 + MIR SINE MIR 2 227 -35 2099 87 27 7 chr10 820364 820662 -144768626 - AluSq SINE Alu -9 304 1 1948 145 14 0 chr10 820988 821284 -144768004 - AluSx SINE Alu -12 300 1 213 296 157 35 chr10 821565 821680 -144767608 - L2 LINE L2 0 3313 3185 2407 49 0 19 chr10 821688 821995 -144767293 + AluY SINE Alu 1 301 -10 286 274 123 0 chr10 822436 822509 -144766779 + L2 LINE L2 3136 3217 -55 2714 22 0 0 chr10 822931 823242 -144766046 - AluY SINE Alu 0 311 1 2405 67 0 0 chr10 823366 823664 -144765624 + AluY SINE Alu 1 298 -13 202 191 270 0 chr10 823983 824046 -144765242 - MIR SINE MIR -63 145 66 1962 123 20 7 chr10 824495 824796 -144764492 - AluSx SINE Alu -7 305 1 1859 82 4 0 chr10 825064 825308 -144763980 - AluSq SINE Alu -68 245 1 242 214 107 0 chr10 825382 825438 -144763850 + L2 LINE L2 3211 3272 0 1990 109 7 7 chr10 825506 825816 -144763472 - AluSx SINE Alu 0 310 1 296 265 312 12 chr10 826063 826233 -144763055 - L2 LINE L2 -19 3294 3074 587 279 293 12 chr10 826365 827127 -144762161 - L2 LINE L2 -1050 2264 1289 21 36 0 0 chr10 827322 827350 -144761938 + AT_rich Low_complexity Low_complexity 1 28 0 194 246 56 84 chr10 828114 828256 -144761032 + MER5A DNA MER1_type 10 147 -42 21 0 0 0 chr10 829309 829330 -144759958 + AT_rich Low_complexity Low_complexity 1 21 0 1789 169 0 16 chr10 829330 829643 -144759645 - AluJb SINE Alu 0 312 5 514 290 54 11 chr10 829794 829980 -144759308 - MER3 DNA MER1_type -1 208 15 2046 122 0 13 chr10 830357 830669 -144758619 - AluSq SINE Alu -4 309 2 2126 124 0 0 chr10 830925 831224 -144758064 + AluSq SINE Alu 1 299 -14 2349 63 13 0 chr10 831484 831784 -144757504 - AluY SINE Alu -7 304 1 265 174 22 0 chr10 832810 832856 -144756432 + MER5A DNA MER1_type 2 48 -141 1199 192 35 52 chr10 832856 833159 -144756129 - L1 LINE L1 -3222 3945 3638 2093 119 6 3 chr10 833159 833470 -144755818 - AluSx SINE Alu 0 312 1 1199 192 35 52 chr10 833470 833759 -144755529 - L1 LINE L1 -3529 3638 3252 * 9194 197 81 25 chr10 833744 836377 -144752911 - L1 LINE L1 -4178 2990 181 2168 76 3 10 chr10 836377 836691 -144752597 - AluY SINE Alu 0 311 1 9194 197 81 25 chr10 836691 836880 -144752408 - L1 LINE L1 -6987 181 4 2145 96 3 0 chr10 837604 837895 -144751393 + AluSq SINE Alu 1 292 -21 888 126 0 7 chr10 838700 838835 -144750453 + AluJo SINE Alu 1 134 -178 357 305 177 55 chr10 839112 839379 -144749909 - L1M4 LINE L1 -801 5345 5112 1901 116 35 3 chr10 839379 839663 -144749625 + AluSx SINE Alu 2 294 -18 357 305 177 55 chr10 839663 839982 -144749306 - L1M4 LINE L1 -1034 5112 4687 1605 154 62 0 chr10 840977 841249 -144748039 + AluJb SINE Alu 1 289 -23 1780 114 0 22 chr10 844217 844490 -144744798 - AluSx SINE Alu -4 308 42 202 191 270 0 chr10 845006 845069 -144744219 - MIR SINE MIR -63 145 66 2118 104 3 3 chr10 845520 845818 -144743470 - AluSg SINE Alu -12 298 1 2183 75 20 3 chr10 845820 846114 -144743174 - AluSq SINE Alu -13 300 2 2005 129 10 3 chr10 847539 847842 -144741446 - AluSx SINE Alu -6 306 2 202 294 0 0 chr10 848740 848791 -144740497 - MIR3 SINE MIR -6 202 152 616 156 0 0 chr10 848907 849003 -144740285 + Tigger4(Zombi) DNA MER2_type 1 96 -2635 622 259 0 8 chr10 849039 849170 -144740118 + FLAM_A SINE Alu 2 131 -2 1761 159 6 22 chr10 849172 849486 -144739802 + AluJb SINE Alu 1 309 -3 22 35 0 0 chr10 849486 849515 -144739773 + AT_rich Low_complexity Low_complexity 1 29 0 3278 160 40 5 chr10 849515 850071 -144739217 + Tigger4(Zombi) DNA MER2_type 2156 2730 -1 266 263 132 0 chr10 852063 852139 -144737149 + L2 LINE L2 3168 3253 -19 3676 201 84 22 chr10 852520 852824 -144736464 + MER21B LTR ERV1 1 285 -578 2100 95 0 23 chr10 852824 853129 -144736159 + AluSx SINE Alu 1 298 -14 3676 201 84 22 chr10 853129 853623 -144735665 + MER21B LTR ERV1 285 848 -15 199 167 0 0 chr10 853833 853863 -144735425 + L2 LINE L2 3216 3245 -27 2462 62 0 0 chr10 853913 854218 -144735070 + AluY SINE Alu 1 305 -6 2094 117 0 0 chr10 854404 854702 -144734586 + AluSq SINE Alu 1 298 -15 2307 121 70 17 chr10 854859 855274 -144734014 + LTR23 LTR ERV1 1 437 0 3554 208 54 60 chr10 856152 857094 -144732194 + LTR23-int LTR ERV1 1558 2493 -3838 1070 62 72 135 chr10 857094 857302 -144731986 + MER30 DNA MER1_type 1 195 -35 708 203 172 55 chr10 857318 857492 -144731796 + LTR23-int LTR ERV1 769 984 -4139 1276 145 97 62 chr10 857492 857782 -144731506 + AluJb SINE Alu 1 300 -12 708 203 172 55 chr10 857782 857863 -144731425 + LTR23-int LTR ERV1 984 1054 -4069 319 247 45 11 chr10 857864 857953 -144731335 + MER34C LTR ERV1 241 332 -253 3048 178 95 140 chr10 857963 858563 -144730725 + LTR23-int LTR ERV1 1160 1785 -3338 1570 144 122 0 chr10 858563 858826 -144730462 + AluSg SINE Alu 1 295 -5 3048 178 95 140 chr10 858826 859335 -144729953 + LTR23-int LTR ERV1 1785 2315 -2808 534 77 26 0 chr10 859335 859413 -144729875 + AluSg/x SINE Alu 217 296 -16 1922 102 0 22 chr10 859422 859697 -144729591 + AluSg SINE Alu 6 274 -36 3048 178 95 140 chr10 859697 860075 -144729213 + LTR23-int LTR ERV1 2323 2664 -2459 839 153 8 0 chr10 860075 860206 -144729082 + FRAM SINE Alu 35 166 -10 3587 129 92 48 chr10 860207 860425 -144728863 + LTR23-int LTR ERV1 3810 4017 -2314 2089 67 3 89 chr10 860425 860752 -144728536 + AluY SINE Alu 1 299 -12 3587 129 92 48 chr10 860752 861286 -144728002 + LTR23-int LTR ERV1 4017 4595 -1736 2160 91 3 0 chr10 861315 861601 -144727687 + AluSp SINE Alu 1 287 -26 241 313 50 0 chr10 861869 861949 -144727339 + MIR SINE MIR 97 180 -82 1943 119 0 11 chr10 862015 862300 -144726988 - AluSx SINE Alu -30 282 1 210 42 62 42 chr10 862352 862400 -144726888 + T-rich Low_complexity Low_complexity 3 51 0 1489 151 48 11 chr10 862739 863011 -144726277 + AluJb SINE Alu 1 282 -30 183 254 51 17 chr10 863221 863280 -144726008 - MIR SINE MIR -132 76 16 2089 92 0 35 chr10 863368 863684 -144725604 - AluSq SINE Alu -8 305 1 2057 106 3 13 chr10 864555 864857 -144724431 - AluSx SINE Alu -13 299 1 25 0 0 0 chr10 865244 865269 -144724019 + AT_rich Low_complexity Low_complexity 1 25 0 189 303 112 0 chr10 865400 865489 -144723799 + L2 LINE L2 3195 3293 -20 2089 103 0 0 chr10 865778 866087 -144723201 + AluSx SINE Alu 1 309 0 533 300 55 38 chr10 866503 866740 -144722548 + L2 LINE L2 3069 3309 -4 1260 147 100 47 chr10 867365 867644 -144721644 - AluJo SINE Alu -18 294 1 479 203 0 0 chr10 868239 868318 -144720970 - tRNA-Ser-TCA tRNA tRNA -4 81 3 2005 111 3 10 chr10 868523 868821 -144720467 - AluY SINE Alu -15 296 1 387 0 0 0 chr10 868893 868936 -144720352 + (TTTA)n Simple_repeat Simple_repeat 1 43 0 511 162 0 76 chr10 868938 869043 -144720245 - AluJo SINE Alu -31 281 185 602 224 8 0 chr10 869055 869180 -144720108 - AluJo SINE Alu -186 126 1 1925 130 3 89 chr10 869244 869613 -144719675 + MER1B DNA MER1_type 1 337 0 2362 87 3 0 chr10 870308 870620 -144718668 - AluSp SINE Alu 0 313 1 1790 162 7 0 chr10 870818 871120 -144718168 - AluSx SINE Alu -8 304 1 204 245 82 0 chr10 871354 871403 -144717885 - MIR SINE MIR -126 82 30 321 130 0 0 chr10 872228 872274 -144717014 - tRNA-Gly-GGC tRNA tRNA -28 46 1 24 32 0 0 chr10 872428 872459 -144716829 + AT_rich Low_complexity Low_complexity 1 31 0 2226 61 0 17 chr10 872513 872807 -144716481 - AluY SINE Alu -22 289 1 1961 134 3 3 chr10 872945 873251 -144716037 - AluJb SINE Alu -6 306 1 506 125 313 9 chr10 873278 873390 -144715898 - LTR23 LTR ERV1 0 437 292 505 189 54 0 chr10 873437 873548 -144715740 - LTR23-int LTR ERV1 -223 4900 4784 6021 140 36 12 chr10 873564 874606 -144714682 - LTR23-int LTR ERV1 -663 5668 4602 1507 188 4 4 chr10 874606 874878 -144714410 + AluJo SINE Alu 3 274 -38 307 336 134 16 chr10 875427 875748 -144713540 + L1M2 LINE L1 774 1132 -5717 2173 109 3 0 chr10 876206 876509 -144712779 + AluSp SINE Alu 1 304 -9 642 189 104 25 chr10 876759 876960 -144712328 - Charlie5 DNA MER1_type -16 2596 2380 2182 119 9 0 chr10 877658 877986 -144711302 - L1PA10 LINE L1 -11 6157 5827 442 271 97 20 chr10 878647 878894 -144710394 - L1MC5 LINE L1 -741 7220 6955 251 273 20 10 chr10 879064 879163 -144710125 - L1MC4 LINE L1 -1133 6909 6810 311 317 154 48 chr10 879356 879564 -144709724 - L1MC4a LINE L1 -1037 6771 6542 1648 176 91 18 chr10 879595 879925 -144709363 - MLT1A1 LTR MaLR 0 365 12 2038 118 0 0 chr10 879944 880231 -144709057 - AluSx SINE Alu -25 287 1 918 214 104 6 chr10 880379 880739 -144708549 - L1ME LINE L1 -629 5537 5149 1969 130 31 0 chr10 880771 881063 -144708225 - AluSx SINE Alu -11 301 1 1721 286 113 38 chr10 881063 882421 -144706867 - L1MEc LINE L1 -4928 1468 9 293 233 128 8 chr10 882415 882548 -144706740 - L1ME4a LINE L1 0 6121 5973 * 354 145 0 0 chr10 882623 882692 -144706596 - L1MA4A LINE L1 -5 6298 6230 737 168 74 62 chr10 883504 883717 -144705571 - L1MA7 LINE L1 -52 6941 6739 2684 137 43 2 chr10 883722 883882 -144705406 - L1MA4A LINE L1 -346 5957 5805 285 29 0 0 chr10 883882 883916 -144705372 + (TG)n Simple_repeat Simple_repeat 2 35 0 2684 137 43 2 chr10 883916 884201 -144705087 - L1MA4A LINE L1 -498 5805 5494 * 15534 174 43 18 chr10 884197 885591 -144703697 - L1MA7 LINE L1 -716 6289 4932 2142 116 0 0 chr10 885591 885884 -144703404 - AluSx SINE Alu -19 293 1 15534 174 43 18 chr10 885884 890600 -144698688 - L1MA7 LINE L1 -2073 4932 3 21 0 0 0 chr10 890611 890632 -144698656 + AT_rich Low_complexity Low_complexity 1 21 0 2419 74 0 0 chr10 891465 891776 -144697512 - AluY SINE Alu 0 311 1 301 196 137 20 chr10 891881 891983 -144697305 - L1M4 LINE L1 -1285 4861 4748 480 314 54 4 chr10 892603 892864 -144696424 - L1M4 LINE L1 -1453 4693 4420 34 72 0 0 chr10 893005 893074 -144696214 + AT_rich Low_complexity Low_complexity 1 69 0 1346 199 21 28 chr10 893292 893579 -144695709 - AluJo SINE Alu -25 287 3 3513 167 9 36 chr10 893592 894251 -144695037 - L1MA7 LINE L1 -1 6290 5650 459 228 0 0 chr10 894256 894335 -144694953 + Tigger5 DNA MER2_type 1 79 -2244 2187 136 21 38 chr10 894382 894670 -144694618 - L1MA7 LINE L1 -643 5648 5365 2049 129 7 0 chr10 894670 894964 -144694324 - AluSx SINE Alu -16 296 1 2187 136 21 38 chr10 894964 895152 -144694136 - L1MA7 LINE L1 -926 5365 5175 413 301 98 33 chr10 895135 895471 -144693817 - L1M4 LINE L1 -1735 4411 4054 * 26 0 0 0 chr10 895746 895772 -144693516 + AT_rich Low_complexity Low_complexity 1 26 0 1778 165 42 22 chr10 895772 896129 -144693159 - L1MB3 LINE L1 -7 6176 5813 690 155 66 94 chr10 896131 896312 -144692976 - MLT2B2 LTR ERVL 0 515 340 1289 277 58 16 chr10 896412 897003 -144692285 - L1MDb LINE L1 -3890 2650 2112 4025 190 30 7 chr10 897716 898265 -144691023 + MER44D DNA MER2_type 6 448 -2039 1517 101 8 38 chr10 898265 898503 -144690785 + AluSx SINE Alu 1 231 -81 4025 190 30 7 chr10 898503 898665 -144690623 + MER44D DNA MER2_type 448 605 0 2172 102 3 0 chr10 898694 898997 -144690291 - AluY SINE Alu -7 304 1 1779 212 50 18 chr10 898999 899495 -144689793 - L1MDb LINE L1 -4488 2052 1541 24137 31 2 0 chr10 899510 903154 -144686134 - L1PA3 LINE L1 0 6155 2513 3648 63 9 0 chr10 903158 903618 -144685670 - L1PA3 LINE L1 -5626 520 57 733 237 54 18 chr10 903619 903888 -144685400 - L1MDb LINE L1 -4988 1555 1196 778 80 0 0 chr10 904080 904180 -144685108 - AluSp/q SINE Alu -15 298 199 1370 71 0 0 chr10 904191 904360 -144684928 + AluY SINE Alu 1 169 -142 834 206 17 0 chr10 904468 904643 -144684645 + AluY SINE Alu 111 288 -23 1032 171 0 6 chr10 904669 904850 -144684438 - AluSx SINE Alu -132 180 1 448 247 192 48 chr10 905289 905763 -144683525 + L1M2 LINE L1 756 1297 -5552 230 351 21 64 chr10 905986 906174 -144683114 - L1MDb LINE L1 -6310 230 51 801 324 21 24 chr10 906245 906622 -144682666 - L1MEc LINE L1 -4394 2002 1627 2011 122 0 0 chr10 906688 906975 -144682313 - AluSx SINE Alu -25 287 1 456 300 39 39 chr10 907840 908123 -144681165 + L1MB3 LINE L1 5304 5586 -2222 1075 123 0 7 chr10 908577 908732 -144680556 + FRAM SINE Alu 1 154 -12 1359 191 61 29 chr10 908979 909324 -144679964 + L1MB3 LINE L1 5807 6162 -21 1243 77 0 22 chr10 909325 909490 -144679798 - AluSc SINE Alu -13 296 134 2136 119 7 0 chr10 909490 909793 -144679495 - AluSx SINE Alu -7 305 1 1243 77 0 22 chr10 909793 909808 -144679480 - AluSc SINE Alu -175 134 120 696 188 5 0 chr10 909995 910214 -144679074 + (CA)n Simple_repeat Simple_repeat 1 220 0 516 244 0 0 chr10 910262 910442 -144678846 + (CA)n Simple_repeat Simple_repeat 1 180 0 189 171 0 0 chr10 913390 913425 -144675863 + T-rich Low_complexity Low_complexity 1 35 0 4867 174 16 7 chr10 913433 914410 -144674878 - L1PB4 LINE L1 -3 6153 5171 3242 187 14 6 chr10 914411 915053 -144674235 - L1PB4 LINE L1 -1131 5015 4369 215 244 9 0 chr10 915172 915287 -144674001 + (CA)n Simple_repeat Simple_repeat 1 116 0 318 165 25 41 chr10 915448 915569 -144673719 + GA-rich Low_complexity Low_complexity 2 120 0 1062 184 9 18 chr10 915806 916029 -144673259 - AluSg SINE Alu -52 258 38 2058 118 0 0 chr10 917088 917377 -144671911 + AluSx SINE Alu 11 299 -13 591 285 29 17 chr10 917498 917670 -144671618 + MIR SINE MIR 64 237 -25 517 197 8 47 chr10 917730 917857 -144671431 + MER33 DNA MER1_type 34 155 -169 450 297 27 76 chr10 917867 918130 -144671158 + AluJb SINE Alu 1 250 -52 1790 163 0 0 chr10 918340 918623 -144670665 + AluJb SINE Alu 1 283 -29 238 228 88 0 chr10 919463 919520 -144669768 - AluJ/FLAM SINE Alu -240 62 1 1733 130 23 47 chr10 919599 919899 -144669389 + AluSx SINE Alu 1 293 -19 262 264 11 11 chr10 919900 919987 -144669301 - L1ME LINE L1 -325 5796 5710 183 222 19 56 chr10 920003 920057 -144669231 + L2 LINE L2 3006 3057 -215 30 0 0 0 chr10 921516 921546 -144667742 + AT_rich Low_complexity Low_complexity 1 30 0 180 0 0 0 chr10 921831 921851 -144667437 + (A)n Simple_repeat Simple_repeat 1 20 0 1960 79 120 0 chr10 924150 924416 -144664872 - AluSc SINE Alu 0 299 2 251 250 12 0 chr10 924495 924575 -144664713 + (CCCCAG)n Simple_repeat Simple_repeat 6 86 0 2276 74 0 0 chr10 925906 926203 -144663085 + AluY SINE Alu 1 297 -14 3366 176 18 22 chr10 926883 927122 -144662166 + L1MA4 LINE L1 5590 5828 -472 2295 88 0 3 chr10 927122 927427 -144661861 + AluY SINE Alu 1 304 -7 3366 176 18 22 chr10 927427 927898 -144661390 + L1MA4 LINE L1 5828 6297 -3 21 0 0 0 chr10 927908 927929 -144661359 + AT_rich Low_complexity Low_complexity 1 21 0 1285 201 115 3 chr10 927940 928339 -144660949 - MER31A LTR ERV1 -1 660 11 378 0 0 0 chr10 928939 928981 -144660307 + (CA)n Simple_repeat Simple_repeat 1 42 0 2213 93 0 7 chr10 929186 929488 -144659800 + AluSx SINE Alu 1 300 -12 231 152 0 0 chr10 929887 929933 -144659355 + CT-rich Low_complexity Low_complexity 1 46 0 2195 83 0 7 chr10 930029 930329 -144658959 - AluSx SINE Alu -9 303 6 643 311 27 18 chr10 931073 931292 -144657996 - MIR SINE MIR -4 258 38 231 302 0 0 chr10 931869 931932 -144657356 + HAL1b LINE L1 245 307 -1041 264 269 90 35 chr10 931940 932085 -144657203 + L2 LINE L2 1390 1542 -1772 997 105 0 0 chr10 932092 932225 -144657063 + AluSq/x SINE Alu 1 133 -180 2309 79 0 3 chr10 932227 932532 -144656756 + AluY SINE Alu 1 304 -7 574 264 116 27 chr10 932538 932796 -144656492 + L2 LINE L2 1552 1832 -1482 1904 112 7 17 chr10 933318 933605 -144655683 - AluSx SINE Alu -26 286 3 23 0 0 0 chr10 933690 933713 -144655575 + AT_rich Low_complexity Low_complexity 1 23 0 1473 141 28 8 chr10 933930 934179 -144655109 + AluJb SINE Alu 6 259 -53 1282 195 64 20 chr10 934617 934961 -144654327 - L1M4 LINE L1 -2117 4029 3671 2090 104 3 0 chr10 935078 935367 -144653921 + AluSg SINE Alu 3 292 -18 376 114 46 80 chr10 935487 935662 -144653626 + (TATAA)n Simple_repeat Simple_repeat 4 172 0 24 32 0 0 chr10 935667 935698 -144653590 + AT_rich Low_complexity Low_complexity 1 31 0 596 190 7 49 chr10 935728 935783 -144653505 - L1M4 LINE L1 -2520 3626 3570 2260 92 3 0 chr10 935783 936087 -144653201 - AluSq SINE Alu -8 305 1 596 190 7 49 chr10 936087 936173 -144653115 - L1M4 LINE L1 -2576 3570 3491 1552 107 37 97 chr10 936291 936590 -144652698 - AluSx SINE Alu -7 305 25 2416 47 0 3 chr10 936887 937186 -144652102 - AluY SINE Alu -13 298 1 2177 29 4 7 chr10 938142 938414 -144650874 + AluY SINE Alu 27 297 -14 209 261 0 0 chr10 939005 939051 -144650237 - MIR SINE MIR -5 257 212 2188 90 0 10 chr10 939917 940227 -144649061 - AluSg SINE Alu -3 307 1 269 303 68 15 chr10 940305 940437 -144648851 - L2 LINE L2 -222 3050 2912 554 245 206 12 chr10 940911 941164 -144648124 - L1ME3 LINE L1 -31 6131 5830 231 224 20 0 chr10 941556 941605 -144647683 - L1ME3 LINE L1 -648 5518 5469 276 150 21 16 chr10 941607 941670 -144647618 - L1ME3 LINE L1 -729 5433 5366 2506 167 106 0 chr10 941672 942193 -144647095 - L1MC1 LINE L1 -2 6331 5756 428 221 33 13 chr10 944187 944364 -144644924 + MER20 DNA MER1_type 1 218 -1 2306 81 7 10 chr10 945721 946030 -144643258 - AluSg SINE Alu -2 308 1 538 250 88 7 chr10 948317 948463 -144640825 - MER105 DNA DNA -1 203 46 232 175 0 0 chr10 948463 948503 -144640785 - MER58 DNA MER1_type 0 2420 2381 827 206 122 55 chr10 948505 948743 -144640545 - MER58 DNA MER1_type -86 255 2 1909 153 0 0 chr10 949077 949365 -144639923 - AluSx SINE Alu -18 294 7 285 75 0 0 chr10 949471 949511 -144639777 + (TG)n Simple_repeat Simple_repeat 2 41 0 636 240 8 0 chr10 949676 949797 -144639491 + MER2 DNA MER2_type 1 122 -223 738 226 7 0 chr10 949809 949946 -144639342 + Tigger3(Golem) DNA MER2_type 5 142 -2887 528 155 68 142 chr10 949944 950092 -144639196 + Tigger3(Golem) DNA MER2_type 2773 2909 -120 * 345 267 155 0 chr10 950589 950705 -144638583 + Tigger3(Golem) DNA MER2_type 2888 3021 -8 778 162 146 22 chr10 950722 950907 -144638381 + MER2 DNA MER2_type 138 345 0 533 137 226 32 chr10 950986 951110 -144638178 - AluSg/x SINE Alu -29 283 136 21 0 0 0 chr10 951897 951918 -144637370 + GC_rich Low_complexity Low_complexity 1 21 0 1834 131 14 0 chr10 952739 953030 -144636258 - AluSp SINE Alu -18 295 1 624 203 199 16 chr10 953144 953395 -144635893 - Charlie1 DNA MER1_type 0 2761 2465 2913 160 71 11 chr10 953430 953968 -144635320 - MER6A DNA MER2_type 0 605 36 3088 178 44 58 chr10 953982 954770 -144634518 - Charlie1 DNA MER1_type -397 2364 1588 * 3923 203 110 92 chr10 954758 954961 -144634327 - Tigger1 DNA MER2_type -210 2208 2010 2065 118 0 0 chr10 954961 955249 -144634039 - AluSg SINE Alu -22 288 1 3923 203 110 92 chr10 955249 956091 -144633197 - Tigger1 DNA MER2_type -408 2010 1185 1549 134 17 0 chr10 956091 956323 -144632965 - AluSx SINE Alu -19 293 58 3923 203 110 92 chr10 956323 956865 -144632423 - Tigger1 DNA MER2_type -1233 1185 654 1150 111 0 33 chr10 956865 957045 -144632243 - AluJo SINE Alu -15 297 124 3923 203 110 92 chr10 957045 957423 -144631865 - Tigger1 DNA MER2_type -1764 654 1 1885 190 114 12 chr10 957838 958260 -144631028 + MLT1C LTR MaLR 1 465 -2 2224 62 7 0 chr10 959276 959564 -144629724 - AluSg SINE Alu -20 290 1 327 337 54 30 chr10 961459 961625 -144627663 - L3 LINE CR1 -423 1154 985 214 342 111 0 chr10 961663 961780 -144627508 + MIR SINE MIR 73 202 -60 626 328 111 32 chr10 961842 962275 -144627013 - L3 LINE CR1 -605 972 506 2013 122 0 3 chr10 962554 962850 -144626438 + AluSx SINE Alu 1 295 -17 194 309 0 0 chr10 963066 963121 -144626167 - L2 LINE L2 -1 3271 3217 2157 154 3 11 chr10 963578 963929 -144625359 + MER7A DNA MER2_type 1 346 0 262 305 86 51 chr10 964045 964242 -144625046 + L2 LINE L2 926 1129 -2185 251 133 22 22 chr10 964256 964268 -144625020 - MER46A DNA MER2_type -83 153 142 1149 176 134 58 chr10 964268 964424 -144624864 + MER46B DNA MER2_type 3 71 -2660 1867 135 7 3 chr10 964424 964720 -144624568 + AluSx SINE Alu 1 297 -15 1149 176 134 58 chr10 964720 964876 -144624412 + MER46B DNA MER2_type 71 214 -22 1932 293 67 30 chr10 965577 965672 -144623616 + L1MDa LINE L1 21 111 -6429 1920 140 7 0 chr10 965672 965965 -144623323 + AluSg SINE Alu 1 295 -15 1932 293 67 30 chr10 965965 966614 -144622674 + L1MDa LINE L1 111 793 -5747 4344 202 175 20 chr10 966659 967450 -144621838 + L1MDa LINE L1 874 1541 -4999 2096 106 13 10 chr10 967450 967761 -144621527 - AluSx SINE Alu 0 312 1 4344 202 175 20 chr10 967761 968348 -144620940 + L1MDa LINE L1 1541 2466 -4074 2112 246 92 30 chr10 968356 968988 -144620300 + L1MB8 LINE L1 3776 4367 -1875 2187 85 0 3 chr10 968988 969282 -144620006 - AluY SINE Alu -18 293 1 2112 246 92 30 chr10 969282 969583 -144619705 + L1MB8 LINE L1 4367 4648 -1594 2335 96 59 31 chr10 969583 969937 -144619351 - THE1B LTR MaLR 0 364 1 2112 246 92 30 chr10 969937 970616 -144618672 + L1MB8 LINE L1 4648 5489 -753 * 2150 154 27 36 chr10 970613 971054 -144618234 + L1MA4A LINE L1 5674 6110 -193 2039 47 95 0 chr10 971066 971340 -144617948 + AluY SINE Alu 1 300 -11 280 227 40 0 chr10 971348 971423 -144617865 + L1MA4A LINE L1 6182 6259 -44 2160 201 121 53 chr10 971435 972081 -144617207 + L1MB8 LINE L1 5473 6162 -16 1698 248 127 19 chr10 972083 972237 -144617051 + L1MD2 LINE L1 5587 5723 -636 180 0 0 0 chr10 972237 972257 -144617031 + (TA)n Simple_repeat Simple_repeat 2 21 0 1698 248 127 19 chr10 972257 972788 -144616500 + L1MD2 LINE L1 5723 6346 -13 2041 132 0 7 chr10 972790 973093 -144616195 + AluSx SINE Alu 1 301 -11 713 192 215 0 chr10 974524 974743 -144614545 + MER33 DNA MER1_type 55 320 -4 22 0 0 0 chr10 974840 974862 -144614426 + AT_rich Low_complexity Low_complexity 1 22 0 1816 118 21 0 chr10 975317 975597 -144613691 - AluSp SINE Alu -25 288 3 1595 177 21 67 chr10 976560 976933 -144612355 - MLT1B LTR MaLR 0 390 35 702 215 44 39 chr10 976948 977153 -144612135 + MER3 DNA MER1_type 1 206 -3 200 232 54 18 chr10 978168 978224 -144611064 + MIR SINE MIR 93 150 -112 1553 70 0 19 chr10 978264 978477 -144610811 - L1PA7 LINE L1 0 6154 5946 2112 111 7 0 chr10 978767 979065 -144610223 - AluSx SINE Alu -12 300 1 2212 101 0 0 chr10 979520 979817 -144609471 + AluY SINE Alu 1 297 -14 1676 98 161 4 chr10 979884 980139 -144609149 + AluSc SINE Alu 2 296 -3 22 56 0 0 chr10 980896 980932 -144608356 + AT_rich Low_complexity Low_complexity 1 36 0 426 154 56 58 chr10 981202 981304 -144607984 - MLT1E2 LTR MaLR 0 626 468 30 0 0 0 chr10 981327 981357 -144607931 + AT_rich Low_complexity Low_complexity 1 30 0 803 147 0 0 chr10 981817 981933 -144607355 - FLAM_C SINE Alu -23 120 5 2112 123 0 0 chr10 982207 982507 -144606781 - AluSx SINE Alu -12 300 1 2117 98 27 0 chr10 982652 982947 -144606341 - AluSg SINE Alu -7 303 1 2343 68 0 13 chr10 983269 983576 -144605712 + AluY SINE Alu 1 303 -8 2195 92 0 13 chr10 984317 984621 -144604667 + AluSg SINE Alu 1 300 -10 432 167 94 10 chr10 984736 984832 -144604456 + AluJb SINE Alu 191 294 -18 213 204 0 74 chr10 985290 985659 -144603629 + (CTGGGG)n Simple_repeat Simple_repeat 1 341 0 224 318 124 8 chr10 986486 986615 -144602673 + MIR3 SINE MIR 44 187 -21 2159 92 3 0 chr10 988087 988382 -144600906 + AluSg SINE Alu 1 296 -14 1835 94 7 42 chr10 988469 988778 -144600510 + AluY SINE Alu 1 298 -13 935 417 41 17 chr10 992814 993109 -144596179 - AluSx SINE Alu 0 302 1 8107 138 50 38 chr10 995291 996731 -144592557 - Tigger1 DNA MER2_type -960 1458 1 390 265 108 64 chr10 997529 997733 -144591555 - HAL1 LINE L1 -2268 239 27 1176 131 0 0 chr10 997809 997984 -144591304 - AluSg/x SINE Alu -17 295 121 21 0 0 0 chr10 997984 998005 -144591283 + AT_rich Low_complexity Low_complexity 1 21 0 1983 124 3 0 chr10 998005 998296 -144590992 - AluSx SINE Alu -20 292 1 2461 53 3 0 chr10 999736 1000040 -144589248 + AluY SINE Alu 1 305 -6 799 95 112 0 chr10 1000062 1000178 -144589110 + AluSg SINE Alu 2 130 -180 296 54 0 0 chr10 1000210 1000247 -144589041 - Alu SINE Alu -9 291 255 489 111 0 0 chr10 1000369 1000441 -144588847 - AluS SINE Alu -236 73 2 1144 163 5 45 chr10 1000462 1000683 -144588605 + AluJb SINE Alu 99 310 -2 690 280 57 0 chr10 1002028 1002221 -144587067 - MER58A DNA MER1_type -15 209 6 976 225 86 47 chr10 1004207 1004567 -144584721 + MLT1A2 LTR MaLR 1 374 0 1814 251 116 21 chr10 1004567 1005239 -144584049 + MLT1A2-int LTR MaLR 1 736 -635 309 262 36 0 chr10 1005359 1005443 -144583845 + MLT1A2-int LTR MaLR 686 772 -963 1766 251 21 23 chr10 1005502 1005977 -144583311 + MLT1A2-int LTR MaLR 1262 1735 0 623 226 11 45 chr10 1005985 1006162 -144583126 + MLT1A2 LTR MaLR 9 179 -195 2284 74 3 3 chr10 1006215 1006513 -144582775 - AluSc SINE Alu -11 298 1 414 320 5 2 chr10 1006540 1006723 -144582565 + MLT1B LTR MaLR 190 374 0 1746 166 47 52 chr10 1009070 1009455 -144579833 - MLT1B LTR MaLR -7 383 1 312 304 97 32 chr10 1009616 1009833 -144579455 + L2 LINE L2 2945 3175 -138 1944 170 77 20 chr10 1010258 1010659 -144578629 - MSTA LTR MaLR 0 428 5 227 321 0 57 chr10 1010671 1010777 -144578511 + L2 LINE L2 3127 3226 -87 1342 230 88 65 chr10 1011966 1012601 -144576687 - MLT1E1 LTR MaLR 0 654 5 245 309 21 69 chr10 1013642 1013683 -144575605 + L2 LINE L2 2305 2346 -968 2405 45 0 0 chr10 1013683 1013974 -144575314 - AluY SINE Alu -20 291 1 245 309 21 69 chr10 1013974 1014120 -144575168 + L2 LINE L2 2346 2483 -831 198 0 0 0 chr10 1014400 1014422 -144574866 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 2075 103 0 0 chr10 1014425 1014706 -144574582 - AluSx SINE Alu -31 281 1 239 236 33 26 chr10 1015317 1015411 -144573877 - L1MC5 LINE L1 -10 7916 7679 656 271 73 50 chr10 1015960 1016300 -144572988 - L1MC4 LINE L1 -197 7845 7498 2034 67 63 25 chr10 1017333 1017618 -144571670 + AluSp SINE Alu 1 296 -17 1222 111 0 0 chr10 1019780 1019942 -144569346 - AluSg/x SINE Alu -2 310 149 12852 153 48 12 chr10 1019952 1021839 -144567449 + Tigger1 DNA MER2_type 15 2002 -416 2297 124 0 3 chr10 1021839 1022145 -144567143 - AluSx SINE Alu -7 305 1 12852 153 48 12 chr10 1022145 1022578 -144566710 + Tigger1 DNA MER2_type 2002 2418 0 348 359 0 0 chr10 1023901 1024043 -144565245 - L1PB4 LINE L1 -9 6147 6006 634 215 29 53 chr10 1024231 1024440 -144564848 - L1PB4 LINE L1 -135 6021 5818 1916 155 3 10 chr10 1024932 1025242 -144564046 - AluJb SINE Alu -4 308 1 234 224 20 0 chr10 1027654 1027703 -144561585 + L2 LINE L2 3259 3308 -5 1108 214 59 2 chr10 1031143 1031549 -144557739 - L1MB4 LINE L1 -6 6174 5698 1854 153 43 3 chr10 1082125 1082407 -144506881 + AluSx SINE Alu 1 293 -19 208 170 38 0 chr10 1084046 1084099 -144505189 + CT-rich Low_complexity Low_complexity 2 56 0 2148 118 17 0 chr10 1084099 1084388 -144504900 - AluSg SINE Alu -16 294 1 186 294 96 75 chr10 1085836 1085982 -144503306 + MIR SINE MIR 58 206 -56 2596 229 74 14 chr10 1088430 1089330 -144499958 + L1MCa LINE L1 748 1792 -4634 1751 258 56 16 chr10 1089434 1090078 -144499210 - L1M4 LINE L1 -1980 4166 3497 294 296 157 26 chr10 1090206 1090629 -144498659 + L1ME3A LINE L1 5138 5628 -542 385 295 66 24 chr10 1090664 1090830 -144498458 + MER5A DNA MER1_type 16 188 -1 268 245 32 0 chr10 1090985 1091079 -144498209 + L1ME3A LINE L1 5855 5951 -219 1796 122 0 4 chr10 1091198 1091453 -144497835 - AluJb SINE Alu 0 312 59 390 248 8 48 chr10 1091935 1092060 -144497228 - MARNA DNA Mariner -345 241 122 280 267 30 30 chr10 1092333 1092390 -144496898 - L1MA10 LINE L1 0 6334 6278 1343 241 73 27 chr10 1092390 1092918 -144496370 - L1ME1 LINE L1 -44 6122 5550 650 216 63 11 chr10 1092916 1093106 -144496182 + L1MCa LINE L1 16 215 -6211 * 1092 256 46 3 chr10 1096813 1097180 -144492108 - L1ME1 LINE L1 -2719 3427 3045 245 304 78 9 chr10 1097790 1097905 -144491383 - Charlie7 DNA MER1_type -736 1876 1754 492 241 76 19 chr10 1098843 1099001 -144490287 + Charlie8 DNA MER1_type 72 238 -2179 325 228 79 44 chr10 1099212 1099326 -144489962 - L1MC4 LINE L1 -1 8041 7924 5864 142 13 25 chr10 1099370 1100119 -144489169 - L1MC1 LINE L1 -8 6325 5591 2225 127 42 23 chr10 1100119 1100473 -144488815 + THE1B LTR MaLR 2 362 -2 5864 142 13 25 chr10 1100473 1100752 -144488536 - L1MC1 LINE L1 -742 5591 5310 1047 101 0 0 chr10 1100752 1100891 -144488397 - AluY SINE Alu -6 305 167 276 80 21 0 chr10 1100891 1100955 -144488333 - L1MC1 LINE L1 -850 5296 5232 2774 219 58 32 chr10 1101085 1102066 -144487222 - L1MDa LINE L1 -2820 3720 2714 1049 163 6 0 chr10 1102070 1102266 -144487022 - AluJo SINE Alu 0 322 126 3083 207 56 41 chr10 1102268 1103228 -144486060 - L1MDa LINE L1 -3834 2706 1740 1721 88 4 9 chr10 1103228 1103456 -144485832 - AluY SINE Alu -6 305 79 371 238 6 0 chr10 1104217 1104389 -144484899 + CT-rich Low_complexity Low_complexity 2 174 0 257 122 67 22 chr10 1104405 1104495 -144484793 + (TCTCTG)n Simple_repeat Simple_repeat 2 95 0 198 204 45 0 chr10 1106446 1106490 -144482798 - MIR3 SINE MIR -52 156 111 665 263 148 31 chr10 1106744 1107196 -144482092 + MLT1D LTR MaLR 1 505 0 2453 84 7 0 chr10 1109426 1109735 -144479553 + AluSx SINE Alu 1 311 -1 236 262 0 0 chr10 1111965 1112026 -144477262 - MLT1J LTR MaLR -3 508 448 259 332 40 60 chr10 1112151 1112350 -144476938 - MLT1J LTR MaLR -60 451 257 406 238 90 0 chr10 1112625 1112747 -144476541 + LTR16C LTR ERVL 359 491 0 2409 65 7 3 chr10 1113251 1113541 -144475747 - AluSc SINE Alu -11 298 8 350 307 84 12 chr10 1115791 1115957 -144473331 + MIR SINE MIR 78 255 -7 453 246 48 0 chr10 1116143 1116269 -144473019 - L1MA6 LINE L1 0 6300 6169 230 156 11 113 chr10 1116275 1116461 -144472827 + (CAT)n Simple_repeat Simple_repeat 2 168 0 2256 189 90 63 chr10 1116826 1117446 -144471842 - L1MA6 LINE L1 -106 6194 5558 371 294 88 19 chr10 1117447 1117607 -144471681 - MIR3 SINE MIR -7 201 31 7590 19 14 0 chr10 1119776 1121259 -144468029 + L1PA2 LINE L1 4695 6174 0 7453 32 7 7 chr10 1121259 1122229 -144467059 + L1PA4 LINE L1 5177 6146 -9 1057 141 0 22 chr10 1123222 1123589 -144465699 + (CACCAT)n Simple_repeat Simple_repeat 1 360 0 2002 102 17 7 chr10 1124496 1124789 -144464499 - AluSq SINE Alu -17 296 1 190 276 86 60 chr10 1126412 1126528 -144462760 - MIR SINE MIR -80 182 64 324 230 27 14 chr10 1127088 1127236 -144462052 + (CA)n Simple_repeat Simple_repeat 1 150 0 338 268 27 18 chr10 1127258 1127370 -144461918 + (CA)n Simple_repeat Simple_repeat 1 113 0 320 245 132 19 chr10 1128422 1128528 -144460760 + L2 LINE L2 3180 3297 -16 1509 166 0 98 chr10 1129381 1129719 -144459569 - AluJb SINE Alu -7 305 1 2317 86 3 0 chr10 1130656 1130957 -144458331 + AluY SINE Alu 1 302 -9 2091 95 3 3 chr10 1132762 1133057 -144456231 - AluSc SINE Alu -14 295 1 1052 75 0 0 chr10 1133676 1133809 -144455479 + AluJb SINE Alu 7 139 -173 289 333 56 0 chr10 1140293 1140401 -144448887 + MIR SINE MIR 57 170 -92 198 0 0 0 chr10 1141356 1141378 -144447910 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 680 271 29 6 chr10 1141438 1141608 -144447680 - MER45A DNA AcHobo -4 174 1 226 227 0 0 chr10 1144447 1144491 -144444797 + T-rich Low_complexity Low_complexity 4 47 0 791 234 70 42 chr10 1146330 1146767 -144442521 - MLT1D LTR MaLR 0 467 5 207 311 78 0 chr10 1147697 1147787 -144441501 + MIR SINE MIR 17 113 -149 1963 91 39 11 chr10 1148535 1148821 -144440467 + AluY SINE Alu 1 294 -17 374 315 109 14 chr10 1149486 1149928 -144439360 - L1MEc LINE L1 -4656 1875 1236 1446 251 11 36 chr10 1149962 1150361 -144438927 + MLT2D LTR ERVL 1 533 -21 288 39 39 20 chr10 1150361 1150412 -144438876 + (TCTA)n Simple_repeat Simple_repeat 2 53 0 237 301 100 35 chr10 1150413 1150752 -144438536 - L1MEc LINE L1 -5014 1402 1042 192 40 0 0 chr10 1151255 1151280 -144438008 + (T)n Simple_repeat Simple_repeat 1 25 0 450 289 179 10 chr10 1151945 1152246 -144437042 + L2 LINE L2 2960 3311 -2 28 48 0 0 chr10 1152409 1152451 -144436837 + AT_rich Low_complexity Low_complexity 1 42 0 885 152 0 0 chr10 1152633 1152765 -144436523 - FLAM_C SINE Alu 0 133 2 273 245 0 0 chr10 1155477 1155530 -144433758 + (CGGG)n Simple_repeat Simple_repeat 4 56 0 883 141 0 22 chr10 1157972 1158107 -144431181 - AluJo/FLAM SINE Alu -170 132 1 415 149 0 103 chr10 1158107 1158205 -144431083 - AluJ/FRAM SINE Alu -7 305 217 * 825 158 0 22 chr10 1158203 1158342 -144430946 - AluJo SINE Alu -175 137 2 301 294 100 6 chr10 1159411 1159571 -144429717 - MER5B DNA MER1_type -3 175 1 707 224 38 6 chr10 1159682 1159865 -144429423 + MER5A DNA MER1_type 1 189 0 258 297 15 123 chr10 1160135 1160330 -144428958 + L1MC/D LINE L1 5611 5784 -2024 445 281 26 0 chr10 1161475 1161628 -144427660 + MLT1A1 LTR MaLR 153 309 -56 2098 88 7 3 chr10 1162929 1163212 -144426076 + AluSx SINE Alu 1 284 -28 327 234 105 16 chr10 1164106 1164230 -144425058 - MLT1C LTR MaLR -6 461 327 180 320 172 8 chr10 1164600 1164722 -144424566 - L2 LINE L2 -20 3252 3111 209 264 22 22 chr10 1165112 1165290 -144423998 + (CACCAT)n Simple_repeat Simple_repeat 1 178 0 288 260 14 14 chr10 1165414 1165560 -144423728 + (CACCAT)n Simple_repeat Simple_repeat 3 148 0 188 33 0 33 chr10 1166940 1166970 -144422318 + (TCCC)n Simple_repeat Simple_repeat 2 30 0 353 132 72 24 chr10 1167338 1167505 -144421783 + (CA)n Simple_repeat Simple_repeat 1 175 0 181 159 65 41 chr10 1167490 1167660 -144421628 + (CACAC)n Simple_repeat Simple_repeat 2 175 0 * 321 119 73 26 chr10 1167635 1167786 -144421502 + (CA)n Simple_repeat Simple_repeat 1 158 0 252 149 75 15 chr10 1167822 1167956 -144421332 + (CA)n Simple_repeat Simple_repeat 1 142 0 286 90 56 34 chr10 1168069 1168158 -144421130 + (TG)n Simple_repeat Simple_repeat 1 91 0 370 309 0 4 chr10 1170402 1170642 -144418646 + (CA)n Simple_repeat Simple_repeat 1 238 0 192 77 0 0 chr10 1172328 1172354 -144416934 + (CAT)n Simple_repeat Simple_repeat 1 26 0 22955 47 10 3 chr10 1172729 1175675 -144413613 + L1P LINE L1 1 2966 -3180 23967 34 4 1 chr10 1175775 1178810 -144410478 - L1P LINE L1 -1044 5102 2058 225 234 0 0 chr10 1178863 1178927 -144410361 + GA-rich Low_complexity Low_complexity 2 65 0 207 379 0 0 chr10 1182409 1182512 -144406776 - MER5A DNA MER1_type -3 186 84 258 274 52 44 chr10 1184526 1184661 -144404627 + L3b LINE CR1 1326 1461 -122 1491 180 20 108 chr10 1184991 1185391 -144403897 - MLT1A1 LTR MaLR 0 365 1 2815 133 17 2 chr10 1185452 1185920 -144403368 - L1MC1 LINE L1 -179 6154 5680 394 296 33 19 chr10 1185924 1186137 -144403151 - L1 LINE L1 -1127 5019 4804 1583 150 8 0 chr10 1186294 1186560 -144402728 - MSTB2 LTR MaLR 0 457 190 1072 180 57 12 chr10 1186556 1186801 -144402487 - MSTB2 LTR MaLR -201 256 1 * 487 330 59 33 chr10 1186847 1187307 -144401981 - L1 LINE L1 -1525 4621 4150 258 32 0 0 chr10 1187389 1187420 -144401868 + (TG)n Simple_repeat Simple_repeat 1 31 0 1742 171 0 7 chr10 1187586 1187879 -144401409 - AluJo SINE Alu -21 291 1 12042 25 7 2 chr10 1189527 1191697 -144397591 + L1PA4 LINE L1 3973 6146 -9 226 76 108 32 chr10 1193612 1193769 -144395519 + (TCTA)n Simple_repeat Simple_repeat 3 171 0 181 116 23 23 chr10 1193806 1193849 -144395439 + (TCTA)n Simple_repeat Simple_repeat 3 45 0 249 349 47 28 chr10 1193850 1193956 -144395332 - L2 LINE L2 -19 3253 3146 1276 216 103 25 chr10 1194045 1194443 -144394845 + MER63B DNA MER1_type 4 432 -4 456 161 0 72 chr10 1195584 1195777 -144393511 + (CAGAGA)n Simple_repeat Simple_repeat 2 180 0 376 309 72 59 chr10 1199757 1200061 -144389227 - MER58B DNA MER1_type -8 333 26 346 363 32 0 chr10 1200069 1200226 -144389062 + MIR SINE MIR 46 207 -55 2394 103 0 0 chr10 1200484 1200794 -144388494 - AluSx SINE Alu -2 310 1 376 309 72 59 chr10 1202441 1202745 -144386543 - MER58B DNA MER1_type -8 333 26 346 363 32 0 chr10 1202753 1202910 -144386378 + MIR SINE MIR 46 207 -55 853 203 98 0 chr10 1203168 1203331 -144385957 - AluJb SINE Alu -2 310 132 2962 200 80 7 chr10 1203331 1204217 -144385071 + L1MB3 LINE L1 5152 6100 -83 2116 125 0 55 chr10 1204714 1205041 -144384247 - AluSx SINE Alu -3 309 1 1691 176 0 14 chr10 1205189 1205484 -144383804 - AluJo SINE Alu -11 301 11 2285 112 13 0 chr10 1205490 1205795 -144383493 - AluSx SINE Alu -3 309 1 231 366 0 38 chr10 1207089 1207272 -144382016 + C-rich Low_complexity Low_complexity 4 179 0 1968 138 43 0 chr10 1208000 1208282 -144381006 + AluSx SINE Alu 1 294 -18 19095 49 2 4 chr10 1212337 1215530 -144373758 - L1PA4 LINE L1 -1 6154 2969 25462 32 6 3 chr10 1216239 1220130 -144369158 + L1PA4 LINE L1 2151 6052 -103 186 294 96 75 chr10 1221074 1221220 -144368068 + MIR SINE MIR 58 206 -56 421 317 45 40 chr10 1222736 1222960 -144366328 + HAL1 LINE L1 977 1201 -1306 304 308 81 5 chr10 1223168 1223389 -144365899 + HAL1 LINE L1 1512 1749 -758 186 294 96 75 chr10 1224995 1225141 -144364147 + MIR SINE MIR 58 206 -56 421 317 45 40 chr10 1226793 1227017 -144362271 + HAL1 LINE L1 977 1201 -1306 304 308 81 5 chr10 1227225 1227446 -144361842 + HAL1 LINE L1 1512 1749 -758 268 255 179 33 chr10 1228160 1228372 -144360916 + HAL1 LINE L1 2265 2507 0 213 240 40 0 chr10 1229106 1229156 -144360132 + C-rich Low_complexity Low_complexity 1 52 0 317 295 67 0 chr10 1229332 1229437 -144359851 + L2 LINE L2 3184 3295 -18 667 293 29 3 chr10 1229448 1229652 -144359636 - MIR SINE MIR 0 262 55 285 211 18 26 chr10 1231563 1231677 -144357611 + (CA)n Simple_repeat Simple_repeat 1 113 0 474 296 107 26 chr10 1231861 1232094 -144357194 + MIR SINE MIR 7 258 -4 619 249 107 29 chr10 1232809 1233160 -144356128 - MLT1C LTR MaLR -7 460 89 939 203 0 0 chr10 1233275 1233438 -144355850 - FRAM SINE Alu -3 163 1 228 228 20 119 chr10 1234015 1234116 -144355172 - L2 LINE L2 -188 3084 2994 7616 33 48 3 chr10 1235521 1236584 -144352704 - L1PA4 LINE L1 -1 6154 5077 10604 40 2 0 chr10 1236584 1237942 -144351346 + L1P LINE L1 2453 3813 -2333 189 0 0 0 chr10 1237946 1237967 -144351321 + (TTCC)n Simple_repeat Simple_repeat 1 21 0 2118 124 0 34 chr10 1237971 1238294 -144350994 - AluSx SINE Alu 0 312 1 1575 127 137 13 chr10 1238307 1238621 -144350667 - L1PA16 LINE L1 0 6166 5814 742 238 25 20 chr10 1239080 1239282 -144350006 - MLT1B LTR MaLR 0 390 188 1783 168 7 7 chr10 1239318 1239629 -144349659 - AluJo SINE Alu 0 311 1 232 235 12 49 chr10 1239631 1239712 -144349576 - MLT1B LTR MaLR -207 167 90 1362 242 3 20 chr10 1239716 1240059 -144349229 + MLT1C-int LTR MaLR 1399 1735 0 763 205 6 23 chr10 1240118 1240289 -144348999 - MLT1A2 LTR MaLR -202 172 5 281 324 9 9 chr10 1243308 1243419 -144345869 - MIR SINE MIR -15 247 137 327 283 35 18 chr10 1244102 1244215 -144345073 - L2 LINE L2 0 3313 3199 270 318 83 23 chr10 1244554 1244686 -144344602 - MIR SINE MIR -64 198 59 220 359 58 26 chr10 1246579 1246735 -144342553 + MIR SINE MIR 6 166 -96 1369 224 99 0 chr10 1247271 1247584 -144341704 - L1MA7 LINE L1 0 6291 5948 491 370 34 13 chr10 1248361 1248596 -144340692 - MIR SINE MIR 0 262 23 3995 112 32 2 chr10 1248883 1249474 -144339814 + MER4B LTR ERV1 1 609 -1 242 347 13 73 chr10 1250448 1250598 -144338690 - MIR SINE MIR -115 147 7 721 132 0 16 chr10 1252163 1252284 -144337004 - FLAM_C SINE Alu -24 119 1 597 187 18 26 chr10 1252962 1253188 -144336100 + GA-rich Low_complexity Low_complexity 1 224 0 639 163 22 22 chr10 1253358 1253536 -144335752 + GA-rich Low_complexity Low_complexity 3 180 0 364 298 60 12 chr10 1254983 1255151 -144334137 + MER5B DNA MER1_type 3 178 0 418 228 94 58 chr10 1257214 1257385 -144331903 + MLT1C LTR MaLR 6 182 -285 1259 234 88 38 chr10 1257447 1257922 -144331366 + LTR55 LTR ERV 34 532 -16 461 260 56 5 chr10 1257932 1258176 -144331112 + MLT1C LTR MaLR 192 373 -17 787 270 40 40 chr10 1258886 1259186 -144330102 - AluSq SINE Alu 0 313 14 241 261 26 17 chr10 1259336 1259451 -144329837 + LTR55 LTR ERV 408 523 -25 413 266 59 5 chr10 1259470 1259713 -144329575 + MLT1C LTR MaLR 192 373 -17 1878 142 46 16 chr10 1260417 1260720 -144328568 - AluJb SINE Alu 0 312 1 353 230 74 14 chr10 1261217 1261365 -144327923 + MER76 LTR ERV 15 171 -517 196 222 0 0 chr10 1262236 1262272 -144327016 - L2 LINE L2 -1 3271 3236 222 174 0 0 chr10 1263233 1263279 -144326009 + CT-rich Low_complexity Low_complexity 3 48 0 1035 190 113 12 chr10 1263441 1263688 -144325600 - L1MC1 LINE L1 0 6333 6062 41066 34 23 10 chr10 1263691 1269767 -144319521 + L1PA2 LINE L1 3 6154 -1 3141 170 66 2 chr10 1269780 1270398 -144318890 - L1MC1 LINE L1 -261 6072 5415 244 305 12 12 chr10 1271794 1271876 -144317412 - L2 LINE L2 0 3313 3232 229 292 15 0 chr10 1272227 1272292 -144316996 - L2 LINE L2 -4 3309 3244 259 268 12 49 chr10 1272783 1272865 -144316423 + MIR SINE MIR 40 118 -90 310 310 86 0 chr10 1274291 1274443 -144314845 - MIR SINE MIR -68 140 17 267 93 0 0 chr10 1276118 1276161 -144313127 + (TCC)n Simple_repeat Simple_repeat 3 45 0 22 0 0 0 chr10 1278917 1278939 -144310349 + AT_rich Low_complexity Low_complexity 1 22 0 409 238 74 25 chr10 1281518 1281700 -144307588 - L1P5 LINE L1 -460 5661 5496 1764 165 7 14 chr10 1283061 1283358 -144305930 - AluJo SINE Alu -11 301 7 207 231 0 58 chr10 1283566 1283618 -144305670 + G-rich Low_complexity Low_complexity 1 49 0 3392 253 85 17 chr10 1284915 1286724 -144302564 + L1MD2 LINE L1 4410 6349 -10 224 237 17 0 chr10 1288273 1288332 -144300956 + GA-rich Low_complexity Low_complexity 1 60 0 1844 173 3 22 chr10 1290694 1291007 -144298281 + AluJb SINE Alu 1 307 -5 219 69 0 0 chr10 1291915 1291944 -144297344 + (T)n Simple_repeat Simple_repeat 1 29 0 590 259 11 52 chr10 1292438 1292612 -144296676 + L1MB7 LINE L1 3969 4135 -2011 3160 195 69 42 chr10 1292623 1293744 -144295544 + L1MB7 LINE L1 5032 6184 0 1737 189 3 40 chr10 1294106 1294429 -144294859 + AluJb SINE Alu 2 312 0 182 178 111 0 chr10 1294646 1294691 -144294597 + L3 LINE CR1 1525 1574 -3 220 307 207 27 chr10 1295310 1295460 -144293828 - MIR SINE MIR -84 178 2 231 253 25 13 chr10 1296444 1296523 -144292765 + (TATATG)n Simple_repeat Simple_repeat 4 83 0 202 310 129 9 chr10 1296923 1297039 -144292249 - MER5A DNA MER1_type -3 186 57 206 239 124 71 chr10 1297080 1297193 -144292095 + L2 LINE L2 3154 3272 0 477 250 0 10 chr10 1297193 1297486 -144291802 + GA-rich Low_complexity Low_complexity 1 290 0 222 194 0 0 chr10 1297489 1297556 -144291732 + (TGGA)n Simple_repeat Simple_repeat 3 69 0 279 0 0 0 chr10 1299046 1299077 -144290211 + (TG)n Simple_repeat Simple_repeat 2 32 0 5361 126 6 14 chr10 1305200 1306064 -144283224 + L1PA15 LINE L1 5303 6159 -6 204 226 19 0 chr10 1309093 1309146 -144280142 - MIR SINE MIR -62 146 93 252 314 65 59 chr10 1309352 1309521 -144279767 - MIR SINE MIR -34 228 59 611 125 45 28 chr10 1309914 1310090 -144279198 + (CAGAGA)n Simple_repeat Simple_repeat 1 179 0 5875 97 11 13 chr10 1310666 1312405 -144276883 + HERVH LTR ERV1 2091 3993 -3720 1228 117 0 0 chr10 1312407 1312587 -144276701 + HERVH LTR ERV1 4488 4667 -3046 * 5343 90 52 0 chr10 1312583 1313397 -144275891 + HERVH LTR ERV1 5769 6624 -1089 1423 85 77 20 chr10 1313398 1313645 -144275643 + HERVH LTR ERV1 7453 7713 0 1843 110 34 8 chr10 1313645 1313995 -144275293 + LTR7 LTR ERV1 1 448 -2 290 337 177 23 chr10 1314800 1314975 -144274313 + MIR SINE MIR 59 260 -2 317 231 45 26 chr10 1315275 1315431 -144273857 + (TA)n Simple_repeat Simple_repeat 2 160 0 283 216 14 0 chr10 1316915 1316989 -144272299 - MER53 DNA DNA -7 182 108 199 196 22 0 chr10 1317263 1317309 -144271979 - MIR SINE MIR -125 137 91 252 231 0 0 chr10 1317464 1317516 -144271772 + GA-rich Low_complexity Low_complexity 1 52 0 228 297 187 13 chr10 1319201 1319356 -144269932 + MER5A DNA MER1_type 1 182 -7 200 291 0 0 chr10 1321250 1321305 -144267983 - MIR SINE MIR -4 258 204 1611 119 125 32 chr10 1321503 1321846 -144267442 + MER51B LTR ERV1 2 376 -1 21 57 0 0 chr10 1322702 1322737 -144266551 + GC_rich Low_complexity Low_complexity 1 35 0 25 75 0 0 chr10 1322792 1322845 -144266443 + GC_rich Low_complexity Low_complexity 1 53 0 22 0 0 0 chr10 1322901 1322923 -144266365 + GC_rich Low_complexity Low_complexity 1 22 0 34 55 0 0 chr10 1323240 1323295 -144265993 + GC_rich Low_complexity Low_complexity 1 55 0 1090 185 33 0 chr10 1323941 1324152 -144265136 - MER2 DNA MER2_type 0 345 128 2251 179 69 26 chr10 1324161 1324294 -144264994 + Tigger1 DNA MER2_type 29 155 -2263 2337 97 3 0 chr10 1324294 1324592 -144264696 - AluSx SINE Alu -13 299 1 2251 179 69 26 chr10 1324592 1324962 -144264326 + Tigger1 DNA MER2_type 155 554 -1864 423 348 55 24 chr10 1325014 1325464 -144263824 + L1ME3 LINE L1 5458 5929 -249 206 385 43 17 chr10 1327604 1327721 -144261567 + MIR SINE MIR 82 201 -61 384 224 95 0 chr10 1329072 1329188 -144260100 + L1MA9 LINE L1 6148 6274 -38 7563 186 21 11 chr10 1329608 1331014 -144258274 + L1PB4 LINE L1 3758 5201 -955 195 42 0 0 chr10 1331014 1331038 -144258250 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 7563 186 21 11 chr10 1331038 1332001 -144257287 + L1PB4 LINE L1 5201 6153 -3 1260 193 30 10 chr10 1332463 1332758 -144256530 + L1MA9 LINE L1 4424 4724 -1422 340 136 23 23 chr10 1332761 1332849 -144256439 + (TCTCTG)n Simple_repeat Simple_repeat 1 88 0 258 56 0 0 chr10 1332849 1332885 -144256403 + (CA)n Simple_repeat Simple_repeat 2 37 0 208 225 11 11 chr10 1333051 1333140 -144256148 + (TG)n Simple_repeat Simple_repeat 2 90 0 524 167 24 8 chr10 1335281 1335407 -144253881 + (CA)n Simple_repeat Simple_repeat 1 128 0 490 189 22 22 chr10 1335460 1335640 -144253648 + (CA)n Simple_repeat Simple_repeat 1 180 0 419 235 40 21 chr10 1336512 1336844 -144252444 + (TG)n Simple_repeat Simple_repeat 1 338 0 363 307 28 6 chr10 1336878 1337054 -144252234 + (TG)n Simple_repeat Simple_repeat 1 180 0 305 420 0 0 chr10 1338111 1338285 -144251003 + G-rich Low_complexity Low_complexity 5 178 0 490 205 8 8 chr10 1340573 1340690 -144248598 + MER53 DNA DNA 3 119 -70 2521 225 59 33 chr10 1340773 1341691 -144247597 + L1MA9 LINE L1 5325 6312 0 269 136 0 0 chr10 1341704 1341748 -144247540 + MER53 DNA DNA 146 189 0 813 281 92 82 chr10 1344058 1345455 -144243833 + L1ME2 LINE L1 92 1502 -4894 6762 258 66 52 chr10 1345486 1349065 -144240223 + L1ME2 LINE L1 1849 5451 -764 1374 145 0 14 chr10 1349072 1349324 -144239964 + AluSq SINE Alu 82 330 0 1580 258 58 41 chr10 1349404 1349993 -144239295 + L1ME2 LINE L1 5634 6232 -1 2034 149 30 0 chr10 1351290 1351591 -144237697 - AluJb SINE Alu -2 310 1 602 175 18 0 chr10 1352366 1352480 -144236808 + MLT1B LTR MaLR 1 116 -274 1790 108 14 11 chr10 1352747 1353033 -144236255 - L1MA2 LINE L1 0 6304 6018 198 0 0 0 chr10 1354399 1354421 -144234867 + (TTTTC)n Simple_repeat Simple_repeat 4 25 0 1223 173 154 0 chr10 1354446 1354706 -144234582 - AluJo SINE Alu -2 300 1 220 255 0 0 chr10 1355958 1356005 -144233283 - L2 LINE L2 0 3272 3226 224 328 15 0 chr10 1358671 1358738 -144230550 + L2 LINE L2 3205 3272 0 310 289 78 49 chr10 1361579 1361721 -144227567 + MER103 DNA DNA 21 166 0 463 220 119 0 chr10 1362496 1362605 -144226683 - MER45A DNA AcHobo -7 171 50 1668 100 21 17 chr10 1365105 1365344 -144223944 + AluSq SINE Alu 66 305 -8 26 50 0 0 chr10 1367641 1367681 -144221607 + AT_rich Low_complexity Low_complexity 1 40 0 357 326 8 0 chr10 1368094 1368226 -144221062 - L1ME LINE L1 -400 5721 5589 24 0 0 0 chr10 1371927 1371951 -144217337 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr10 1371996 1372017 -144217271 + AT_rich Low_complexity Low_complexity 1 21 0 322 262 65 9 chr10 1372316 1372423 -144216865 + MIR SINE MIR 88 200 -62 4128 81 41 3 chr10 1373774 1374357 -144214931 + LTR14B LTR ERVK 4 608 0 674 167 35 4 chr10 1374359 1374590 -144214698 + (TGGA)n Simple_repeat Simple_repeat 1 238 0 589 180 30 0 chr10 1374611 1374778 -144214510 + (TGGA)n Simple_repeat Simple_repeat 4 175 0 513 199 19 0 chr10 1374868 1375024 -144214264 + (TGGA)n Simple_repeat Simple_repeat 4 162 0 31 0 0 0 chr10 1375234 1375265 -144214023 + AT_rich Low_complexity Low_complexity 1 31 0 225 369 92 0 chr10 1375467 1375597 -144213691 + MIR SINE MIR 46 187 -75 209 275 12 25 chr10 1375714 1375794 -144213494 + (CATATA)n Simple_repeat Simple_repeat 6 84 0 275 280 105 83 chr10 1376953 1377177 -144212111 - MIR SINE MIR -13 249 21 1808 84 0 8 chr10 1378641 1378879 -144210409 - AluSq SINE Alu -12 301 66 537 263 25 0 chr10 1381057 1381175 -144208113 - L2 LINE L2 0 3313 3193 184 250 0 21 chr10 1384941 1384989 -144204299 + L2 LINE L2 3267 3313 0 4467 197 29 24 chr10 1386625 1387514 -144201774 + L1MD2 LINE L1 4822 5704 -655 2049 116 0 26 chr10 1387514 1387817 -144201471 - AluSx SINE Alu -14 298 4 4467 197 29 24 chr10 1387817 1387840 -144201448 + L1MD2 LINE L1 5704 5725 -634 2241 78 7 3 chr10 1387840 1388133 -144201155 - AluY SINE Alu -17 294 1 4467 197 29 24 chr10 1388133 1388376 -144200912 + L1MD2 LINE L1 5725 6151 -208 264 137 0 0 chr10 1388376 1388427 -144200861 + (CA)n Simple_repeat Simple_repeat 1 51 0 293 226 24 24 chr10 1388431 1388515 -144200773 + L1MD2 LINE L1 6135 6218 -141 581 263 58 0 chr10 1388597 1388768 -144200520 + L1MD2 LINE L1 6176 6356 -3 189 203 14 27 chr10 1389376 1389450 -144199838 + CT-rich Low_complexity Low_complexity 1 73 0 1247 238 55 43 chr10 1389450 1390110 -144199178 + L1MDa LINE L1 1963 2730 -3893 1138 118 0 18 chr10 1390129 1390298 -144198990 + AluSg/x SINE Alu 129 294 -18 3278 227 45 52 chr10 1390301 1391514 -144197774 + L1MDa LINE L1 2720 3923 -2617 243 0 0 0 chr10 1391729 1391756 -144197532 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 2987 86 17 2 chr10 1393935 1394539 -144194749 + PABL_A LTR ERV1 1 660 0 221 194 0 16 chr10 1395652 1395714 -144193574 + (TG)n Simple_repeat Simple_repeat 2 62 0 284 202 0 48 chr10 1396780 1396864 -144192424 - L1MC4 LINE L1 -1339 6703 6624 187 273 57 45 chr10 1399804 1399892 -144189396 + MIR SINE MIR 23 111 -151 205 228 38 63 chr10 1401057 1401136 -144188152 - MIR SINE MIR -38 224 148 225 235 43 61 chr10 1401279 1401394 -144187894 - MIR SINE MIR -54 208 96 1042 224 103 24 chr10 1451682 1452012 -144137276 + MLT1A2 LTR MaLR 19 374 0 894 144 7 0 chr10 1452274 1452413 -144136875 + L1P LINE L1 4882 5021 -1125 269 270 95 40 chr10 1453078 1453204 -144136084 - MIR SINE MIR -71 191 59 10548 37 2 0 chr10 1453833 1455114 -144134174 - L1P LINE L1 -2361 3785 2503 194 326 90 35 chr10 1455214 1455314 -144133974 + MIR SINE MIR 107 219 -43 2254 118 0 0 chr10 1455314 1455619 -144133669 + AluSx SINE Alu 1 305 -7 194 326 90 35 chr10 1455619 1455662 -144133626 + MIR SINE MIR 219 258 -4 1062 203 50 5 chr10 1456364 1456586 -144132702 + L1PA15-16 LINE L1 1453 1684 -5165 254 176 132 0 chr10 1456588 1456656 -144132632 + polypurine Low_complexity Low_complexity 3 79 0 4423 134 31 15 chr10 1456656 1457437 -144131851 + L1PA15-16 LINE L1 1617 2409 -4440 2646 221 20 11 chr10 1457537 1458270 -144131018 + L1 LINE L1 3506 4245 -2604 31 0 0 0 chr10 1459982 1460013 -144129275 + AT_rich Low_complexity Low_complexity 1 31 0 205 296 0 0 chr10 1460140 1460184 -144129104 - L2 LINE L2 -8 3305 3262 197 211 96 19 chr10 1460148 1460200 -144129088 - MIR SINE MIR -10 252 197 * 257 189 176 0 chr10 1460371 1460445 -144128843 + MLT1J LTR MaLR 419 505 -6 447 137 0 27 chr10 1461048 1461121 -144128167 - 5S rRNA rRNA -20 101 31 384 265 17 87 chr10 1461628 1461858 -144127430 - L1ME4a LINE L1 -12 6109 5896 987 176 18 0 chr10 1463001 1463166 -144126122 + MER68 LTR ERV1 395 562 0 461 323 5 5 chr10 1463275 1463473 -144125815 + L1M3 LINE L1 2703 2900 -3246 277 167 0 0 chr10 1463476 1463518 -144125770 - Tigger5 DNA MER2_type 0 2323 2282 * 309 237 17 0 chr10 1463516 1463575 -144125713 + Tigger5 DNA MER2_type 2259 2318 -5 265 182 227 30 chr10 1463575 1463641 -144125647 - Tigger5 DNA MER2_type -2243 80 2 344 178 0 0 chr10 1463643 1463716 -144125572 + L1M3 LINE L1 2904 2976 -3170 226 211 0 39 chr10 1463718 1463770 -144125518 + L1M4 LINE L1 435 484 -6091 443 250 91 40 chr10 1463800 1463976 -144125312 + L1M3d LINE L1 64 248 -6294 1333 222 64 12 chr10 1464141 1464479 -144124809 + L1M3 LINE L1 5231 5580 -600 22 0 0 0 chr10 1466011 1466033 -144123255 + AT_rich Low_complexity Low_complexity 1 22 0 480 331 6 0 chr10 1466310 1466488 -144122800 + (CA)n Simple_repeat Simple_repeat 2 180 0 180 77 0 0 chr10 1467099 1467125 -144122163 + (CCA)n Simple_repeat Simple_repeat 3 28 0 282 238 16 0 chr10 1468469 1468532 -144120756 + L1M3d LINE L1 238 301 -6343 2430 92 0 0 chr10 1468699 1469004 -144120284 - AluSx SINE Alu -7 305 1 3947 144 58 5 chr10 1469257 1469909 -144119379 + L1PA16 LINE L1 5470 6156 -10 534 201 10 10 chr10 1470674 1470969 -144118319 + (TG)n Simple_repeat Simple_repeat 1 295 0 189 147 0 0 chr10 1472115 1472149 -144117139 + (TC)n Simple_repeat Simple_repeat 1 34 0 213 193 18 18 chr10 1472708 1472765 -144116523 + (TA)n Simple_repeat Simple_repeat 2 58 0 359 330 54 15 chr10 1474098 1474301 -144114987 + L1M3d LINE L1 652 862 -5772 358 237 26 105 chr10 1474548 1474700 -144114588 + L1M4 LINE L1 2088 2227 -4598 219 36 0 0 chr10 1474723 1474751 -144114537 + (TG)n Simple_repeat Simple_repeat 2 29 0 * 342 0 0 0 chr10 1474750 1474788 -144114500 + (TA)n Simple_repeat Simple_repeat 1 38 0 337 291 63 63 chr10 1475050 1475256 -144114032 + L1M3d LINE L1 881 1086 -5479 1857 231 160 45 chr10 1475384 1476184 -144113104 + L1M4c LINE L1 542 1794 -4519 3620 244 33 11 chr10 1476284 1477331 -144111957 + L1P LINE L1 2639 3708 -2438 8574 78 13 0 chr10 1477431 1478567 -144110721 - L1P LINE L1 -4660 1486 336 1754 176 65 40 chr10 1478667 1479037 -144110251 + L1MC1 LINE L1 5950 6328 -5 630 152 27 0 chr10 1479042 1479154 -144110134 + L1MB7 LINE L1 6051 6165 -19 2935 150 44 22 chr10 1479174 1479501 -144109787 - L1MD2 LINE L1 -423 5936 5591 1691 160 35 11 chr10 1479501 1479788 -144109500 - AluJo SINE Alu -18 294 1 2935 150 44 22 chr10 1479788 1480008 -144109280 - L1MD2 LINE L1 -768 5591 5377 518 224 33 33 chr10 1480018 1480170 -144109118 + L1MC5 LINE L1 7314 7465 -496 5808 167 40 3 chr10 1480300 1481432 -144107856 - L1PBa LINE L1 -4453 2410 1093 2800 184 71 17 chr10 1481433 1482025 -144107263 - L1PBa LINE L1 -5815 1048 425 21 36 0 0 chr10 1482300 1482328 -144106960 + AT_rich Low_complexity Low_complexity 1 28 0 5839 163 38 10 chr10 1483820 1485046 -144104242 + L1PA12 LINE L1 225 2004 -5577 999 159 12 0 chr10 1485044 1485207 -144104081 + L1PA13 LINE L1 339 503 -6284 * 21 36 0 0 chr10 1485467 1485495 -144103793 + AT_rich Low_complexity Low_complexity 1 28 0 210 315 0 14 chr10 1485768 1485841 -144103447 + (CATATA)n Simple_repeat Simple_repeat 5 76 0 247 191 0 0 chr10 1486290 1486332 -144102956 + MIR SINE MIR 111 152 -56 1290 139 43 9 chr10 1487143 1487373 -144101915 + MLT1B LTR MaLR 151 388 -2 22 56 0 0 chr10 1487616 1487652 -144101636 + AT_rich Low_complexity Low_complexity 1 36 0 2324 88 16 0 chr10 1490168 1490473 -144098815 + AluSg SINE Alu 1 310 0 4395 183 44 35 chr10 1491859 1492903 -144096385 - L1 LINE L1 -1279 5049 3997 1477 234 61 16 chr10 1493009 1493454 -144095834 - L1ME2 LINE L1 -142 6022 5558 2954 137 41 2 chr10 1493456 1493939 -144095349 - L1PA16 LINE L1 -3 6163 5662 2195 124 0 3 chr10 1493958 1494264 -144095024 - AluSx SINE Alu -7 305 1 906 287 123 21 chr10 1494265 1495150 -144094138 - L1ME2 LINE L1 -1890 4256 3261 5318 184 23 32 chr10 1495268 1496786 -144092502 - L1 LINE L1 -4296 2032 3 186 224 0 0 chr10 1497133 1497182 -144092106 + (TG)n Simple_repeat Simple_repeat 2 50 0 356 327 92 0 chr10 1497356 1497509 -144091779 - MIR SINE MIR -66 196 30 258 241 74 37 chr10 1497578 1497686 -144091602 - L1MA10 LINE L1 0 6334 6223 936 187 7 1 chr10 1497735 1497920 -144091368 - L1ME1 LINE L1 -290 5882 5693 4680 164 38 14 chr10 1497921 1498952 -144090336 + L1MB2 LINE L1 5105 6164 -7 247 169 0 123 chr10 1498957 1499022 -144090266 + L1ME3A LINE L1 5962 6018 -152 418 93 0 0 chr10 1499596 1499650 -144089638 - Alu SINE Alu -250 60 7 463 186 44 18 chr10 1500111 1500224 -144089064 + MER4C LTR ERV1 4 119 -346 226 224 0 0 chr10 1500289 1500338 -144088950 + MER4A LTR ERV1 136 184 -480 399 217 59 129 chr10 1500370 1500758 -144088530 + MER4A LTR ERV1 189 656 -43 4763 187 5 32 chr10 1501378 1502572 -144086716 + L1P4 LINE L1 4316 5472 -694 442 319 44 28 chr10 1502567 1503180 -144086108 + L1ME LINE L1 4934 5557 -605 * 268 206 124 84 chr10 1504653 1504795 -144084493 - MLT1L LTR MaLR -304 207 49 1073 229 47 0 chr10 1504795 1505009 -144084279 - MER58A DNA MER1_type 0 224 1 268 206 124 84 chr10 1505009 1505058 -144084230 - MLT1L LTR MaLR -462 49 3 1902 76 4 0 chr10 1509397 1509647 -144079641 - L1PA8 LINE L1 -3 6169 5919 8273 163 11 12 chr10 1509747 1510761 -144078527 - L1P LINE L1 -1953 4193 3179 2352 93 6 6 chr10 1510761 1511072 -144078216 - AluY SINE Alu 0 311 1 8273 163 11 12 chr10 1511072 1511538 -144077750 - L1P LINE L1 -2967 3179 2714 1764 117 0 0 chr10 1511537 1511776 -144077512 + L1P LINE L1 1 239 -5907 * 312 250 77 0 chr10 1511877 1511981 -144077307 - LTR43 LTR ERV1 -479 123 12 475 329 103 16 chr10 1512071 1512518 -144076770 - L1ME1 LINE L1 -4 6162 5677 849 245 24 21 chr10 1512860 1513223 -144076065 - L1ME1 LINE L1 -782 5364 5155 251 106 0 21 chr10 1513622 1513669 -144075619 + Alu SINE Alu 263 308 0 5307 141 12 15 chr10 1513669 1514538 -144074750 + L1PA15 LINE L1 5297 6165 0 905 240 115 13 chr10 1514549 1514861 -144074427 - L1ME1 LINE L1 -3600 2546 2203 3392 240 80 21 chr10 1514972 1516197 -144073091 - L1 LINE L1 -2550 3596 2300 1801 163 38 20 chr10 1516198 1516542 -144072746 + MER65A LTR ERV1 1 350 -95 3249 123 7 2 chr10 1516544 1517007 -144072281 + HSMAR1 DNA Mariner 27 491 -796 265 345 18 9 chr10 1517107 1517220 -144072068 - L2 LINE L2 -20 3293 3180 238 313 56 56 chr10 1518286 1518430 -144070858 - MIR SINE MIR -72 190 47 252 257 68 0 chr10 1518788 1518862 -144070426 + L1MA9 LINE L1 6057 6135 -177 786 207 112 90 chr10 1524266 1524623 -144064665 - MLT1A1 LTR MaLR 0 365 1 7176 220 113 9 chr10 1524938 1527028 -144062260 - L1PA13 LINE L1 -3979 2818 499 760 100 0 0 chr10 1527028 1527128 -144062160 + THE1C LTR MaLR 1 100 -275 7205 176 31 11 chr10 1527603 1529825 -144059463 - L1PA14 LINE L1 0 6161 3898 225 0 0 0 chr10 1530665 1530690 -144058598 + (CAAA)n Simple_repeat Simple_repeat 3 27 0 561 167 0 0 chr10 1531512 1531614 -144057674 + (TCCA)n Simple_repeat Simple_repeat 4 105 0 8605 204 61 16 chr10 1531720 1533238 -144056050 + L1M1 LINE L1 3344 4793 -2772 659 232 8 0 chr10 1533238 1533363 -144055925 + FLAM_A SINE Alu 2 127 -6 8605 204 61 16 chr10 1533363 1534665 -144054623 + L1M1 LINE L1 4793 6418 -1147 792 77 19 0 chr10 1534661 1534765 -144054523 + L1PA12 LINE L1 1 106 -7475 * 279 29 0 0 chr10 1534765 1534800 -144054488 - MADE1 DNA Mariner -34 46 12 246 215 115 110 chr10 1535258 1535449 -144053839 - MLT1J LTR MaLR -112 399 208 5617 205 137 49 chr10 1535455 1537320 -144051968 - L1MCa LINE L1 -4392 2034 6 382 216 11 0 chr10 1537298 1537386 -144051902 - L1M LINE L1 -766 5688 5600 * 2410 150 50 43 chr10 1537486 1538165 -144051123 - L1M4 LINE L1 -401 5777 5091 977 226 35 42 chr10 1538445 1538732 -144050556 - L1ME1 LINE L1 -18 6148 5864 2096 148 77 0 chr10 1538738 1539076 -144050212 + THE1B LTR MaLR 1 364 0 4990 90 3 1 chr10 1539076 1539740 -144049548 + THE1B-int LTR MaLR 1 665 -915 362 73 0 0 chr10 1539721 1539776 -144049512 + THE1B-int LTR MaLR 1521 1575 -5 * 247 292 109 58 chr10 1539894 1540031 -144049257 + L2 LINE L2 3128 3271 -1 191 311 49 0 chr10 1541243 1541304 -144047984 + L2 LINE L2 3201 3264 -8 299 380 0 0 chr10 1542347 1542476 -144046812 + (TGAG)n Simple_repeat Simple_repeat 4 132 0 1574 170 71 3 chr10 1544649 1544972 -144044316 - MLT1B LTR MaLR -38 352 8 21 36 0 0 chr10 1545445 1545473 -144043815 + AT_rich Low_complexity Low_complexity 1 28 0 304 271 157 52 chr10 1546785 1546995 -144042293 - L1M2 LINE L1 -5598 1251 1020 12610 34 3 2 chr10 1548441 1550648 -144038640 + L1PA4 LINE L1 3880 6090 -65 641 136 14 27 chr10 1550761 1550908 -144038380 + (TCCA)n Simple_repeat Simple_repeat 2 146 0 765 157 11 11 chr10 1550950 1551128 -144038160 + (TCCA)n Simple_repeat Simple_repeat 3 180 0 295 252 0 103 chr10 1551765 1551872 -144037416 + MIR SINE MIR 89 184 -78 407 329 110 0 chr10 1551982 1552128 -144037160 - MIR SINE MIR -57 205 44 398 295 53 27 chr10 1552153 1552393 -144036895 + MIR SINE MIR 12 256 -6 337 301 39 0 chr10 1552858 1552961 -144036327 + MIR SINE MIR 88 194 -68 1154 163 15 0 chr10 1553165 1553368 -144035920 - L1PA15 LINE L1 -7 6158 5953 1686 162 14 0 chr10 1553469 1553753 -144035535 - MSTA LTR MaLR -140 288 1 994 162 81 0 chr10 1553916 1554113 -144035175 + AluJb SINE Alu 55 267 -45 318 286 109 8 chr10 1555846 1555965 -144033323 - MER5A DNA MER1_type -52 137 7 2070 126 0 0 chr10 1556174 1556475 -144032813 + AluSg SINE Alu 1 301 -9 5013 181 15 30 chr10 1557986 1558010 -144031278 - L1MC1 LINE L1 -6 6327 6304 3301 110 31 90 chr10 1558010 1558157 -144031131 - MER4A LTR ERV1 0 600 446 2201 75 0 0 chr10 1558157 1558462 -144030826 - AluY SINE Alu 0 307 3 3301 110 31 90 chr10 1558462 1558948 -144030340 - MER4A LTR ERV1 -154 446 3 5013 181 15 30 chr10 1558948 1559948 -144029340 - L1MC1 LINE L1 -29 6304 5319 892 264 70 98 chr10 1561175 1561717 -144027571 + MER77 LTR ERV1 79 605 0 419 210 10 0 chr10 1562253 1562353 -144026935 + CT-rich Low_complexity Low_complexity 1 101 0 270 284 0 34 chr10 1563068 1563156 -144026132 - L2 LINE L2 -3 3269 3185 209 57 29 0 chr10 1564774 1564809 -144024479 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 1174 22 0 0 chr10 1566165 1566299 -144022989 + L1PA3 LINE L1 6022 6155 0 311 233 89 22 chr10 1567158 1567248 -144022040 - MIR SINE MIR -131 131 36 250 246 72 14 chr10 1567310 1567379 -144021909 - L2 LINE L2 -16 3297 3225 279 319 11 33 chr10 1568411 1568502 -144020786 + L2 LINE L2 3221 3309 -4 849 254 90 3 chr10 1568634 1568922 -144020366 + MER33 DNA MER1_type 9 321 -3 189 0 0 0 chr10 1570857 1570878 -144018410 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 267 224 149 0 chr10 1571960 1572027 -144017261 + Charlie8 DNA MER1_type 118 194 -2223 465 110 0 0 chr10 1572538 1572611 -144016677 + (CA)n Simple_repeat Simple_repeat 2 74 0 202 397 127 15 chr10 1573271 1573545 -144015743 - L2 LINE L2 0 3272 2937 1642 194 0 19 chr10 1573545 1573860 -144015428 - AluJb SINE Alu -3 309 1 202 397 127 15 chr10 1573860 1573988 -144015300 - L2 LINE L2 -335 2937 2825 7242 114 67 8 chr10 1574943 1576105 -144013183 - Tigger3b DNA MER2_type 0 1231 1 617 258 30 6 chr10 1576785 1576952 -144012336 + MER3 DNA MER1_type 35 205 -4 304 200 55 0 chr10 1578700 1578810 -144010478 + (CTGTG)n Simple_repeat Simple_repeat 4 119 0 246 261 15 0 chr10 1580136 1580201 -144009087 + L2 LINE L2 3247 3312 -1 296 320 137 23 chr10 1581347 1581522 -144007766 + MIR3 SINE MIR 6 200 -8 21 57 0 0 chr10 1582216 1582251 -144007037 + AT_rich Low_complexity Low_complexity 1 35 0 198 71 0 0 chr10 1583311 1583339 -144005949 + (GA)n Simple_repeat Simple_repeat 1 28 0 1976 210 167 4 chr10 1583586 1584144 -144005144 + L1MB3 LINE L1 5534 6182 -1 522 324 0 0 chr10 1586115 1586534 -144002754 + (TATG)n Simple_repeat Simple_repeat 1 419 0 505 302 0 0 chr10 1586551 1586824 -144002464 + (TAGG)n Simple_repeat Simple_repeat 1 273 0 1818 120 31 51 chr10 1587720 1587888 -144001400 + L1PA13 LINE L1 5780 5950 -213 1988 134 10 0 chr10 1587888 1588180 -144001108 + AluSq SINE Alu 1 295 -18 1818 120 31 51 chr10 1588180 1588361 -144000927 + L1PA13 LINE L1 5950 6122 -41 261 189 0 38 chr10 1588376 1588429 -144000859 + L1PA13 LINE L1 6072 6122 -41 261 189 0 38 chr10 1588410 1588463 -144000825 + L1PA13 LINE L1 6072 6122 -41 227 226 0 38 chr10 1588478 1588531 -144000757 + L1PA13 LINE L1 6072 6122 -41 243 208 0 38 chr10 1588580 1588633 -144000655 + L1PA13 LINE L1 6072 6122 -41 243 208 0 38 chr10 1588614 1588667 -144000621 + L1PA13 LINE L1 6072 6122 -41 * 277 219 35 31 chr10 1588648 1588735 -144000553 + L1PA13 LINE L1 6072 6141 -22 243 208 0 38 chr10 1588750 1588803 -144000485 + L1PA13 LINE L1 6072 6122 -41 * 277 217 43 29 chr10 1588784 1588853 -144000435 + L1PA13 LINE L1 6072 6141 -22 241 233 0 33 chr10 1588845 1588905 -144000383 + L1PA13 LINE L1 6065 6122 -41 * 227 226 0 38 chr10 1589056 1589109 -144000179 + L1PA13 LINE L1 6072 6122 -41 * 277 217 43 29 chr10 1589090 1589159 -144000129 + L1PA13 LINE L1 6072 6141 -22 259 217 0 33 chr10 1589151 1589211 -144000077 + L1PA13 LINE L1 6065 6122 -41 * 236 211 0 39 chr10 1589192 1589244 -144000044 + L1PA13 LINE L1 6072 6121 -42 * 234 226 0 38 chr10 1589226 1589279 -144000009 + L1PA13 LINE L1 6072 6122 -41 * 246 208 0 38 chr10 1589260 1589313 -143999975 + L1PA13 LINE L1 6072 6122 -41 425 125 62 25 chr10 1589337 1589417 -143999871 + L1PA13 LINE L1 6081 6163 0 21 0 0 0 chr10 1589948 1589969 -143999319 + AT_rich Low_complexity Low_complexity 1 21 0 2110 120 0 10 chr10 1590158 1590450 -143998838 + AluSx SINE Alu 1 289 -23 659 240 0 6 chr10 1590941 1591293 -143997995 + (TG)n Simple_repeat Simple_repeat 1 349 0 586 244 66 77 chr10 1592334 1592698 -143996590 + MLT1A2 LTR MaLR 2 361 -13 245 258 61 15 chr10 1593590 1593656 -143995632 + MIR SINE MIR 55 123 -85 220 265 243 15 chr10 1593901 1594037 -143995251 + MIR SINE MIR 15 181 -81 2111 130 3 13 chr10 1594108 1594416 -143994872 + AluSx SINE Alu 1 305 -7 1711 185 7 7 chr10 1595595 1596069 -143993219 - AluJo SINE Alu 0 312 7 1102 77 0 0 chr10 1596824 1596954 -143992334 + AluYb8 SINE Alu 1 130 -188 21223 114 12 17 chr10 1596964 1600359 -143988929 + L1P LINE L1 11 3388 -2758 414 0 0 0 chr10 1601640 1601686 -143987602 + (CA)n Simple_repeat Simple_repeat 1 46 0 285 271 171 0 chr10 1601933 1602062 -143987226 - MIR SINE MIR -90 172 22 1996 196 217 10 chr10 1602394 1603002 -143986286 + L1MC1 LINE L1 5600 6333 0 1487 180 23 23 chr10 1603111 1603411 -143985877 + L1PA15 LINE L1 5865 6164 -1 2264 106 3 3 chr10 1605367 1605668 -143983620 + AluSq SINE Alu 1 301 -12 225 94 0 0 chr10 1605741 1605773 -143983515 + (TC)n Simple_repeat Simple_repeat 1 32 0 2167 85 0 41 chr10 1606387 1606682 -143982606 + AluSg SINE Alu 12 294 -16 943 151 17 6 chr10 1607812 1607991 -143981297 - MSTB LTR MaLR -245 181 1 345 273 0 0 chr10 1608300 1608428 -143980860 + (CA)n Simple_repeat Simple_repeat 2 129 0 528 258 0 0 chr10 1608451 1608629 -143980659 + (CA)n Simple_repeat Simple_repeat 1 178 0 471 50 25 12 chr10 1610215 1610295 -143978993 + (TCTA)n Simple_repeat Simple_repeat 2 82 0 182 275 0 0 chr10 1610302 1610342 -143978946 + L2 LINE L2 3255 3294 -19 300 172 0 0 chr10 1610364 1610422 -143978866 + (TGGA)n Simple_repeat Simple_repeat 4 61 0 1026 93 7 0 chr10 1612323 1612463 -143976825 - MER4E LTR ERV1 0 766 626 211 306 121 45 chr10 1613242 1613441 -143975847 - L2 LINE L2 -42 3271 3058 1835 112 0 79 chr10 1614750 1615080 -143974208 - AluSx SINE Alu 0 306 1 610 326 96 48 chr10 1615086 1615813 -143973475 - L2 LINE L2 -1904 1410 649 209 173 333 0 chr10 1616108 1616189 -143973099 + MER5A DNA MER1_type 61 168 -21 219 69 0 0 chr10 1619543 1619572 -143969716 + (TAA)n Simple_repeat Simple_repeat 2 30 0 2812 73 0 19 chr10 1619655 1620024 -143969264 + L1PA7 LINE L1 5792 6153 -1 398 276 88 0 chr10 1620103 1620273 -143969015 - MER5A DNA MER1_type 0 189 5 518 206 38 19 chr10 1620435 1620595 -143968693 - L1M4 LINE L1 -945 5201 5039 253 374 12 23 chr10 1620922 1621093 -143968195 - L2 LINE L2 -529 2785 2617 383 302 94 50 chr10 1621170 1621329 -143967959 + L2 LINE L2 3104 3269 -3 560 294 109 25 chr10 1621482 1621598 -143967690 + L2 LINE L2 1809 1914 -1400 189 0 0 0 chr10 1621598 1621619 -143967669 + (TC)n Simple_repeat Simple_repeat 1 21 0 560 294 109 25 chr10 1621619 1621777 -143967511 + L2 LINE L2 1914 2106 -1208 662 207 25 0 chr10 1621778 1621899 -143967389 - FRAM SINE Alu -21 155 32 525 276 23 6 chr10 1621918 1622092 -143967196 + MER5B DNA MER1_type 1 177 -1 1504 280 149 31 chr10 1622093 1623113 -143966175 + L2 LINE L2 2110 3309 -4 183 42 0 0 chr10 1623600 1623624 -143965664 + (CAA)n Simple_repeat Simple_repeat 2 25 0 285 229 0 0 chr10 1623969 1624030 -143965258 - LTR16A LTR ERVL -9 441 381 2590 134 3 3 chr10 1624031 1624405 -143964883 - THE1C LTR MaLR 0 375 2 1120 80 11 11 chr10 1624407 1624582 -143964706 - THE1C-int LTR MaLR -1 1579 1405 * 6422 115 53 8 chr10 1624580 1625580 -143963708 - THE1C-int LTR MaLR -535 1045 1 373 143 182 0 chr10 1625591 1625668 -143963620 - THE1C LTR MaLR -149 226 136 441 229 34 34 chr10 1625668 1625847 -143963441 + (CATGT)n Simple_repeat Simple_repeat 1 179 0 29537 97 8 16 chr10 1625954 1630419 -143958869 - L1P LINE L1 -1356 4790 358 1684 57 9 26 chr10 1630533 1630761 -143958527 + L1PA8 LINE L1 5947 6170 -2 372 373 158 6 chr10 1630790 1631112 -143958176 + L2 LINE L2 2452 2822 -492 235 264 108 48 chr10 1631138 1631305 -143957983 + L2 LINE L2 3122 3298 -15 214 217 22 0 chr10 1631357 1631403 -143957885 + L2 LINE L2 3220 3266 -6 2740 236 69 42 chr10 1632365 1633373 -143955915 + L1 LINE L1 2873 3908 -2238 22288 45 0 0 chr10 1633373 1636981 -143952307 + L1PA4 LINE L1 2585 6153 -2 245 269 20 12 chr10 1636989 1637114 -143952174 + L1 LINE L1 4247 4375 -1771 315 229 123 16 chr10 1637120 1637242 -143952046 + LTR33 LTR ERVL 2 136 -385 23 0 0 0 chr10 1638934 1638957 -143950331 + AT_rich Low_complexity Low_complexity 1 23 0 369 305 72 18 chr10 1639456 1639679 -143949609 - MARNA DNA Mariner -166 420 186 963 184 134 20 chr10 1640492 1640693 -143948595 + MER58A DNA MER1_type 1 224 0 292 336 116 14 chr10 1641097 1641243 -143948045 - MIR3 SINE MIR -11 197 37 411 280 100 10 chr10 1641285 1641485 -143947803 - LTR33 LTR ERVL 0 521 304 183 286 54 0 chr10 1641739 1641795 -143947493 + L2 LINE L2 3255 3313 0 1535 210 12 18 chr10 1641987 1642325 -143946963 - MLT1E3 LTR MaLR 0 624 289 670 150 19 3 chr10 1642353 1642525 -143946763 - MLT1E1 LTR MaLR -424 230 5 21 0 0 0 chr10 1642623 1642644 -143946644 + AT_rich Low_complexity Low_complexity 1 21 0 229 67 0 167 chr10 1642919 1642979 -143946309 + MER50 LTR ERV1 658 707 -27 1837 155 16 13 chr10 1643004 1643314 -143945974 - AluJb SINE Alu -1 311 1 347 202 11 0 chr10 1645836 1645925 -143943363 + GA-rich Low_complexity Low_complexity 1 90 0 2446 133 14 0 chr10 1646937 1647305 -143941983 + MER83C LTR ERV1 1 373 0 4568 214 52 24 chr10 1649709 1650128 -143939160 + L1 LINE L1 3950 4355 -1791 2352 84 0 14 chr10 1650128 1650425 -143938863 + AluY SINE Alu 1 293 -18 4568 214 52 24 chr10 1650425 1651280 -143938008 + L1 LINE L1 4355 5261 -885 214 346 53 30 chr10 1651541 1651674 -143937614 + L3 LINE CR1 812 947 -630 1676 138 7 22 chr10 1652497 1652773 -143936515 - AluSx SINE Alu -6 306 35 671 283 28 31 chr10 1653525 1653898 -143935390 + L1MA9 LINE L1 5935 6306 -6 240 86 0 0 chr10 1654491 1654526 -143934762 + (CA)n Simple_repeat Simple_repeat 1 35 0 2385 100 0 3 chr10 1656845 1657155 -143932133 + AluSg SINE Alu 1 309 -1 4421 165 14 7 chr10 1660149 1661034 -143928254 + L1PB4 LINE L1 5183 6072 -84 524 233 15 0 chr10 1661136 1661269 -143928019 + L1PB4 LINE L1 6022 6156 0 209 326 45 0 chr10 1662127 1662216 -143927072 + MIR SINE MIR 117 209 -53 1754 160 13 26 chr10 1662574 1662880 -143926408 - AluJb SINE Alu -10 302 1 2252 124 0 3 chr10 1663214 1663520 -143925768 + AluSx SINE Alu 1 305 -7 542 239 6 0 chr10 1665453 1665629 -143923659 + (CA)n Simple_repeat Simple_repeat 2 178 0 542 254 3 3 chr10 1665672 1666023 -143923265 + (CA)n Simple_repeat Simple_repeat 1 351 0 202 222 0 22 chr10 1666681 1666726 -143922562 + L2 LINE L2 3261 3304 -9 345 269 148 9 chr10 1668045 1668153 -143921135 - MER5A DNA MER1_type -1 188 66 251 229 0 29 chr10 1668434 1668504 -143920784 + CT-rich Low_complexity Low_complexity 1 68 0 319 266 132 82 chr10 1668953 1669430 -143919858 - L1MEc LINE L1 -4657 1906 1406 222 272 0 26 chr10 1669588 1669777 -143919511 + CT-rich Low_complexity Low_complexity 1 184 0 210 200 32 42 chr10 1669790 1669885 -143919403 + (TCTCG)n Simple_repeat Simple_repeat 2 95 0 345 316 37 0 chr10 1670994 1671130 -143918158 + (CATG)n Simple_repeat Simple_repeat 3 143 0 315 122 0 0 chr10 1673696 1673745 -143915543 + (GA)n Simple_repeat Simple_repeat 1 49 0 252 0 0 0 chr10 1674196 1674224 -143915064 + (TG)n Simple_repeat Simple_repeat 1 28 0 368 230 0 6 chr10 1675015 1675193 -143914095 + CT-rich Low_complexity Low_complexity 2 178 0 323 306 183 31 chr10 1675233 1675681 -143913607 - L1MEc LINE L1 -5063 1321 806 213 146 0 0 chr10 1675725 1675773 -143913515 + (TC)n Simple_repeat Simple_repeat 1 48 0 2495 94 173 5 chr10 1677660 1678076 -143911212 + LTR19A LTR ERV1 1 486 0 873 254 139 68 chr10 1678877 1679439 -143909849 + MLT1E2 LTR MaLR 20 621 -5 26 30 0 0 chr10 1679916 1679949 -143909339 + AT_rich Low_complexity Low_complexity 1 33 0 2381 209 51 41 chr10 1679965 1680461 -143908827 - L1MC3 LINE L1 -1 7784 7294 2224 121 7 0 chr10 1680461 1680758 -143908530 - AluSx SINE Alu -13 299 1 2381 209 51 41 chr10 1680758 1680934 -143908354 - L1MC3 LINE L1 -491 7294 5648 283 329 0 0 chr10 1680936 1681094 -143908194 + (TG)n Simple_repeat Simple_repeat 2 159 0 861 231 16 0 chr10 1681109 1681308 -143907980 - L1MC/D LINE L1 -582 5572 5493 261 315 76 51 chr10 1681428 1681625 -143907663 - MIR SINE MIR -37 225 24 644 206 6 17 chr10 1682796 1682976 -143906312 + (TATG)n Simple_repeat Simple_repeat 2 179 0 184 338 73 50 chr10 1683844 1684063 -143905225 - MIR SINE MIR -14 248 25 212 310 126 0 chr10 1687335 1687422 -143901866 - L2 LINE L2 -3 3310 3213 187 266 9 9 chr10 1691318 1691427 -143897861 + (TG)n Simple_repeat Simple_repeat 1 109 0 418 313 50 0 chr10 1691427 1691587 -143897701 + (CATG)n Simple_repeat Simple_repeat 1 168 0 205 264 28 7 chr10 1691604 1691748 -143897540 + (TG)n Simple_repeat Simple_repeat 2 148 0 193 311 0 14 chr10 1691883 1691957 -143897331 - L3b LINE CR1 -210 1373 1301 1603 91 45 0 chr10 1692257 1692477 -143896811 - MER30 DNA MER1_type 0 230 1 1921 166 0 3 chr10 1694153 1694454 -143894834 - AluSx SINE Alu -12 300 1 231 269 83 9 chr10 1698481 1698589 -143890699 + L1ME4a LINE L1 6006 6121 0 225 301 88 37 chr10 1698791 1699007 -143890281 - L2 LINE L2 -215 3098 2872 * 310 288 64 0 chr10 1698983 1699108 -143890180 - L2 LINE L2 -1579 1735 1603 516 183 39 0 chr10 1699562 1699666 -143889622 - MLT1F1 LTR MaLR -3 564 457 3304 138 25 6 chr10 1699692 1700206 -143889082 - MER1A DNA MER1_type -5 524 1 23 0 0 0 chr10 1700655 1700678 -143888610 + AT_rich Low_complexity Low_complexity 1 23 0 345 269 32 11 chr10 1704249 1704342 -143884946 + MIR SINE MIR 124 218 -44 181 228 158 79 chr10 1707112 1707213 -143882075 + MIR SINE MIR 18 126 -82 1172 99 0 0 chr10 1707865 1708007 -143881281 - AluSq/x SINE Alu -170 142 1 256 250 65 46 chr10 1710168 1710276 -143879012 + MER5A DNA MER1_type 59 168 -21 667 166 24 19 chr10 1712344 1712536 -143876752 + GA-rich Low_complexity Low_complexity 1 190 -237 186 43 0 0 chr10 1712536 1712559 -143876729 + (GGGA)n Simple_repeat Simple_repeat 4 26 0 667 166 24 19 chr10 1712559 1712769 -143876519 + GA-rich Low_complexity Low_complexity 190 427 0 189 300 89 11 chr10 1714274 1714364 -143874924 + L2 LINE L2 1354 1450 -1864 588 218 0 0 chr10 1714651 1714825 -143874463 + (CA)n Simple_repeat Simple_repeat 1 174 0 225 163 61 0 chr10 1714826 1714875 -143874413 - MLT1B LTR MaLR -336 54 3 328 296 138 0 chr10 1716414 1716573 -143872715 - MIR SINE MIR -64 198 18 247 202 18 175 chr10 1716575 1716689 -143872599 + MER58 DNA MER1_type 1 96 -119 418 214 41 0 chr10 1716693 1716791 -143872497 + MER58 DNA MER1_type 2318 2419 -1 2496 67 0 0 chr10 1718532 1718830 -143870458 + AluY SINE Alu 1 298 -13 235 273 68 0 chr10 1720250 1720338 -143868950 + LTR33 LTR ERVL 2 95 -426 273 274 53 0 chr10 1721907 1722020 -143867268 + LTR33 LTR ERVL 385 503 -18 537 239 8 0 chr10 1722455 1722572 -143866716 - AluSg/x SINE Alu -21 289 172 744 242 15 14 chr10 1722968 1723261 -143866027 + L1ME1 LINE L1 2286 2576 -3806 3614 274 84 19 chr10 1723264 1723363 -143865925 + L1ME1 LINE L1 2802 2893 -3489 2141 118 14 0 chr10 1723363 1723650 -143865638 - AluSc SINE Alu -18 291 1 3614 274 84 19 chr10 1723650 1725293 -143863995 + L1ME1 LINE L1 2893 4658 -1724 1342 184 0 0 chr10 1725304 1725521 -143863767 - AluJb SINE Alu 0 312 96 2684 231 66 32 chr10 1725557 1726707 -143862581 + L1ME1 LINE L1 4674 5855 -547 805 327 18 3 chr10 1726854 1727187 -143862101 + L1ME1 LINE L1 5891 6228 -174 529 229 88 35 chr10 1727829 1727970 -143861318 - MIR SINE MIR -72 190 37 1642 203 3 16 chr10 1727970 1728314 -143860974 + AluJb SINE Alu 6 312 0 529 229 88 35 chr10 1728314 1728342 -143860946 - MIR SINE MIR -225 37 12 24 0 0 0 chr10 1728665 1728689 -143860599 + AT_rich Low_complexity Low_complexity 1 24 0 23 33 0 0 chr10 1728976 1729006 -143860282 + AT_rich Low_complexity Low_complexity 1 30 0 259 114 0 0 chr10 1730838 1730882 -143858406 - HSMAR1 DNA Mariner -1243 44 1 184 321 57 0 chr10 1733200 1733253 -143856035 - MIR3 SINE MIR -48 160 105 330 328 103 29 chr10 1734178 1734382 -143854906 - L2 LINE L2 -1 3312 3094 1998 120 0 11 chr10 1734721 1735039 -143854249 + AluSg SINE Alu 33 310 0 222 222 0 19 chr10 1735225 1735279 -143854009 + CT-rich Low_complexity Low_complexity 1 53 0 322 261 13 21 chr10 1736255 1736495 -143852793 + (CA)n Simple_repeat Simple_repeat 1 237 0 1575 215 35 81 chr10 1736815 1737311 -143851977 + MLT2B1 LTR ERVL 1 518 -2 1055 206 59 0 chr10 1737311 1737530 -143851758 + MER46A DNA MER2_type 1 232 -4 796 74 8 8 chr10 1737538 1737660 -143851628 + (TCTA)n Simple_repeat Simple_repeat 3 124 0 1575 215 35 81 chr10 1737660 1737699 -143851589 + MLT2B1 LTR ERVL 481 520 0 1970 159 10 0 chr10 1740249 1740544 -143848744 + AluJb SINE Alu 1 298 -14 207 162 35 35 chr10 1740683 1740856 -143848432 + (TA)n Simple_repeat Simple_repeat 1 173 0 269 171 57 0 chr10 1740869 1740957 -143848331 + (TA)n Simple_repeat Simple_repeat 1 93 0 505 320 39 11 chr10 1742570 1742751 -143846537 - MIR SINE MIR -10 252 67 2086 89 7 14 chr10 1743576 1743890 -143845398 + AluSg SINE Alu 1 312 0 268 31 0 0 chr10 1743858 1743910 -143845378 + (CAAAA)n Simple_repeat Simple_repeat 3 54 0 271 234 0 0 chr10 1744098 1744145 -143845143 - L3 LINE CR1 -112 1465 1419 252 137 0 0 chr10 1744650 1744701 -143844587 + (CA)n Simple_repeat Simple_repeat 2 52 0 2254 107 0 0 chr10 1745745 1746036 -143843252 + AluSx SINE Alu 1 291 -21 285 340 97 0 chr10 1746214 1746317 -143842971 + L2 LINE L2 3199 3311 -2 21 0 0 0 chr10 1746579 1746600 -143842688 + AT_rich Low_complexity Low_complexity 1 21 0 347 211 0 7 chr10 1746703 1746850 -143842438 + (CA)n Simple_repeat Simple_repeat 2 147 0 302 297 159 12 chr10 1747030 1747196 -143842092 - MIR SINE MIR -58 150 14 285 217 86 99 chr10 1749955 1750107 -143839181 - L2 LINE L2 -93 3179 3030 180 219 0 0 chr10 1751335 1751376 -143837912 + (TG)n Simple_repeat Simple_repeat 1 41 0 308 330 23 0 chr10 1751389 1751477 -143837811 - L1MC4 LINE L1 -1339 6703 6614 225 186 71 29 chr10 1751478 1751548 -143837740 + L1MCa LINE L1 1996 2068 -4358 248 264 0 9 chr10 1751550 1751660 -143837628 + (TATG)n Simple_repeat Simple_repeat 4 112 0 332 246 107 3 chr10 1754176 1754340 -143834948 + MER67D LTR ERV1 274 514 0 353 175 10 0 chr10 1755454 1755557 -143833731 + (CA)n Simple_repeat Simple_repeat 1 104 0 540 200 0 0 chr10 1755619 1755799 -143833489 + (CA)n Simple_repeat Simple_repeat 1 180 0 418 191 0 22 chr10 1755830 1756013 -143833275 + (CA)n Simple_repeat Simple_repeat 2 180 0 275 369 37 0 chr10 1756429 1756616 -143832672 + Charlie8 DNA MER1_type 28 221 -2196 215 291 18 0 chr10 1758909 1758964 -143830324 - MIR SINE MIR -64 144 89 330 26 0 0 chr10 1759378 1759417 -143829871 + (TG)n Simple_repeat Simple_repeat 2 40 0 244 363 71 0 chr10 1759883 1759996 -143829292 + MIR SINE MIR 48 168 -94 200 238 95 71 chr10 1761218 1761344 -143827944 + MIR SINE MIR 24 152 -110 630 203 68 0 chr10 1762071 1762189 -143827099 - FLAM_A SINE Alu -7 126 1 426 207 0 0 chr10 1764777 1764859 -143824429 - MER94 DNA DNA -52 82 1 498 380 22 0 chr10 1767023 1767207 -143822081 + MIR3 SINE MIR 14 201 -7 196 303 278 25 chr10 1768590 1768752 -143820536 - MIR SINE MIR -28 234 32 21 0 0 0 chr10 1770225 1770246 -143819042 + AT_rich Low_complexity Low_complexity 1 21 0 192 200 0 0 chr10 1770719 1770779 -143818509 + (TG)n Simple_repeat Simple_repeat 1 60 0 2180 112 14 0 chr10 1772568 1772862 -143816426 - AluSx SINE Alu -12 300 3 23 33 0 0 chr10 1773162 1773192 -143816096 + AT_rich Low_complexity Low_complexity 1 30 0 2649 127 33 55 chr10 1774520 1774976 -143814312 - MER83 LTR ERV1 -2 446 1 340 291 108 54 chr10 1775097 1775392 -143813896 - L1MC4a LINE L1 -1934 5874 5564 223 26 77 0 chr10 1775517 1775556 -143813732 + T-rich Low_complexity Low_complexity 1 42 0 2295 168 8 0 chr10 1776554 1776941 -143812347 + MLT1B LTR MaLR 1 390 0 290 259 63 63 chr10 1777072 1777230 -143812058 + Charlie5 DNA MER1_type 2401 2558 -54 198 0 0 0 chr10 1777438 1777460 -143811828 + (TG)n Simple_repeat Simple_repeat 1 22 0 257 303 55 28 chr10 1777512 1777621 -143811667 + L2 LINE L2 3199 3310 -3 1597 21 0 16 chr10 1780864 1781054 -143808234 - L1PA4 LINE L1 -4 6151 5965 262 282 129 16 chr10 1782570 1782694 -143806594 - MER103 DNA DNA -12 154 17 210 91 0 0 chr10 1783168 1783201 -143806087 + (T)n Simple_repeat Simple_repeat 1 33 0 447 159 0 28 chr10 1783464 1783571 -143805717 + CT-rich Low_complexity Low_complexity 3 106 0 2036 159 7 0 chr10 1783579 1783887 -143805401 - AluSx SINE Alu 0 312 3 210 143 0 0 chr10 1784064 1784099 -143805189 + (GGGA)n Simple_repeat Simple_repeat 4 38 0 180 0 0 0 chr10 1784987 1785007 -143804281 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1913 127 0 12 chr10 1785016 1785275 -143804013 - AluSx SINE Alu -56 256 1 4661 154 47 9 chr10 1785537 1786533 -143802755 + L1PA16 LINE L1 5118 6161 -5 254 57 0 0 chr10 1786533 1786568 -143802720 + L1PA16 LINE L1 6127 6161 -5 237 286 0 59 chr10 1788909 1788950 -143800338 + (CATATA)n Simple_repeat Simple_repeat 3 45 -69 183 80 0 0 chr10 1788950 1788975 -143800313 + (CA)n Simple_repeat Simple_repeat 2 26 0 237 286 0 59 chr10 1788975 1789052 -143800236 + (CATATA)n Simple_repeat Simple_repeat 45 114 0 248 307 72 42 chr10 1789395 1789561 -143799727 + MIR3 SINE MIR 14 184 -24 671 207 0 0 chr10 1790038 1790159 -143799129 + MLT1B LTR MaLR 1 121 -269 415 233 103 0 chr10 1790905 1791021 -143798267 + MIR SINE MIR 133 260 -2 281 267 27 0 chr10 1793001 1793076 -143796212 + L2 LINE L2 3191 3267 -5 273 147 29 15 chr10 1798185 1798253 -143791035 + (TA)n Simple_repeat Simple_repeat 1 69 0 180 0 0 0 chr10 1800303 1800323 -143788965 + (T)n Simple_repeat Simple_repeat 1 20 0 21 0 0 0 chr10 1800893 1800914 -143788374 + AT_rich Low_complexity Low_complexity 1 21 0 449 238 156 0 chr10 1804698 1804820 -143784468 + MIR SINE MIR 36 176 -86 316 292 128 32 chr10 1806520 1806739 -143782549 - MIR SINE MIR -21 241 2 1789 110 0 0 chr10 1807922 1808187 -143781101 + AluSx SINE Alu 50 314 0 1078 164 5 21 chr10 1812697 1812886 -143776402 + AluJb SINE Alu 34 219 -93 1901 270 28 24 chr10 1814167 1814749 -143774539 + L1MC2 LINE L1 156 739 -5825 783 175 81 6 chr10 1814749 1814909 -143774379 + MER30B DNA MER1_type 19 190 0 3685 196 57 21 chr10 1814956 1816128 -143773160 + L1MC2 LINE L1 574 1802 -4762 * 4762 178 39 24 chr10 1816115 1816213 -143773075 + L1MC2 LINE L1 5609 5704 -1058 2517 8 0 0 chr10 1816213 1816481 -143772807 + AluY SINE Alu 44 311 0 4762 178 39 24 chr10 1816481 1817421 -143771867 + L1MC2 LINE L1 5704 6664 -98 282 329 0 0 chr10 1818126 1818208 -143771080 + MER5B DNA MER1_type 97 178 0 230 140 40 140 chr10 1820954 1821054 -143768234 + MER39 LTR ERV1 62 151 -556 486 0 0 0 chr10 1821635 1821689 -143767599 + (CA)n Simple_repeat Simple_repeat 2 55 0 22 0 0 0 chr10 1822269 1822291 -143766997 + AT_rich Low_complexity Low_complexity 1 22 0 204 125 0 0 chr10 1822729 1822761 -143766527 + (CATATA)n Simple_repeat Simple_repeat 2 33 0 273 176 0 88 chr10 1822764 1822866 -143766422 + L1MC4 LINE L1 6611 6703 -1339 285 288 0 0 chr10 1873617 1873690 -143715598 + (TA)n Simple_repeat Simple_repeat 2 74 0 1660 53 5 0 chr10 1874323 1874529 -143714759 - AluY SINE Alu -3 308 102 1756 140 19 0 chr10 1875046 1875310 -143713978 - AluSg SINE Alu -18 292 24 1508 168 38 52 chr10 1875340 1875631 -143713657 - AluJb SINE Alu -25 287 1 23 0 0 0 chr10 1875820 1875843 -143713445 + AT_rich Low_complexity Low_complexity 1 23 0 1760 111 96 4 chr10 1875871 1876164 -143713124 + AluSp SINE Alu 1 317 0 2635 129 26 7 chr10 1876904 1877331 -143711957 + MER83 LTR ERV1 5 439 -9 298 226 73 15 chr10 1877466 1877603 -143711685 - L1ME4a LINE L1 -210 5911 5767 30 69 0 0 chr10 1877606 1877664 -143711624 + AT_rich Low_complexity Low_complexity 1 58 0 29 0 0 0 chr10 1877751 1877780 -143711508 + AT_rich Low_complexity Low_complexity 1 29 0 342 240 39 19 chr10 1877830 1877952 -143711336 - L1MC2 LINE L1 -10 7145 7017 4923 200 23 11 chr10 1878048 1879516 -143709772 - L1MC3 LINE L1 -109 7676 4724 1279 149 8 56 chr10 1879516 1879784 -143709504 - MER44D DNA MER2_type -84 525 1 441 246 0 0 chr10 1880842 1880976 -143708312 + (CA)n Simple_repeat Simple_repeat 1 134 0 183 122 163 0 chr10 1881362 1881411 -143707877 - MER5C DNA MER1_type -226 98 42 570 169 0 0 chr10 1881606 1881724 -143707564 + (TCTA)n Simple_repeat Simple_repeat 3 120 0 353 236 9 9 chr10 1881727 1881833 -143707455 - L1MC2 LINE L1 -2337 6282 6177 252 86 0 0 chr10 1882043 1882078 -143707210 + (TG)n Simple_repeat Simple_repeat 1 35 0 1159 200 18 18 chr10 1883295 1883575 -143705713 + L1 LINE L1 4000 4279 -1867 235 291 94 16 chr10 1883738 1883865 -143705423 - L1MC2 LINE L1 -1981 4976 4840 305 280 94 24 chr10 1883980 1884309 -143704979 - L1MC2 LINE L1 -2406 4551 4200 261 165 44 22 chr10 1884344 1884435 -143704853 + (TA)n Simple_repeat Simple_repeat 1 93 0 275 276 25 45 chr10 1884460 1884659 -143704629 - L1MC2 LINE L1 -2832 4125 3931 22 56 0 0 chr10 1884993 1885029 -143704259 + AT_rich Low_complexity Low_complexity 1 36 0 1336 167 85 35 chr10 1885068 1885350 -143703938 + AluJb SINE Alu 3 298 -14 28 61 0 0 chr10 1886157 1886206 -143703082 + AT_rich Low_complexity Low_complexity 1 49 0 2400 24 0 14 chr10 1887191 1887495 -143701793 - L1PA4 LINE L1 -181 5974 5675 1283 67 0 46 chr10 1887495 1887722 -143701566 + L1PA4 LINE L1 5970 6155 0 24 32 0 0 chr10 1889900 1889931 -143699357 + AT_rich Low_complexity Low_complexity 1 31 0 824 55 31 0 chr10 1891223 1891350 -143697938 + (TCTA)n Simple_repeat Simple_repeat 4 134 0 1810 163 25 0 chr10 1891408 1891691 -143697597 + AluSx SINE Alu 1 290 -22 1211 156 20 8 chr10 1892056 1892306 -143696982 - L1MA4 LINE L1 0 6300 6048 21 0 0 0 chr10 1892624 1892645 -143696643 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 1893448 1893469 -143695819 + AT_rich Low_complexity Low_complexity 1 21 0 785 302 121 6 chr10 1894484 1895162 -143694126 - L1MC2 LINE L1 -3161 3796 3041 450 293 87 16 chr10 1895603 1896124 -143693164 - L1MC2 LINE L1 -4471 2486 1971 338 242 123 76 chr10 1896132 1896434 -143692854 - L1MC2 LINE L1 -5046 1914 1599 186 393 0 22 chr10 1896465 1896554 -143692734 - L2 LINE L2 -43 3229 3143 1320 179 126 60 chr10 1896789 1897244 -143692044 - L1MA9 LINE L1 -4 6308 5825 1060 279 61 0 chr10 1900489 1900865 -143688423 - L1MC2 LINE L1 -6086 773 375 233 296 20 0 chr10 1900981 1901079 -143688209 - L1MC2 LINE L1 -6457 402 303 2097 118 28 0 chr10 1901261 1901548 -143687740 + AluSx SINE Alu 1 295 -17 24 77 0 0 chr10 1902015 1902067 -143687221 + AT_rich Low_complexity Low_complexity 1 52 0 198 0 0 0 chr10 1902594 1902616 -143686672 + (T)n Simple_repeat Simple_repeat 1 22 0 1601 193 11 0 chr10 1903469 1903754 -143685534 + AluJo SINE Alu 5 292 -20 385 295 46 18 chr10 1904749 1905034 -143684254 + HAL1 LINE L1 993 1285 -1222 22 0 0 0 chr10 1907682 1907704 -143681584 + AT_rich Low_complexity Low_complexity 1 22 0 2131 125 0 3 chr10 1907706 1908009 -143681279 + AluSx SINE Alu 1 302 -10 225 0 0 0 chr10 1909179 1909204 -143680084 + (TTTTA)n Simple_repeat Simple_repeat 5 29 0 2293 108 0 0 chr10 1909324 1909621 -143679667 + AluSq SINE Alu 1 297 -16 313 322 43 6 chr10 1909916 1910252 -143679036 - L1ME LINE L1 -661 5501 5155 1602 179 55 10 chr10 1910775 1911065 -143678223 - AluJb SINE Alu -9 303 1 798 251 45 0 chr10 1911092 1911315 -143677973 + MLT2C2 LTR ERVL 1 233 -231 318 50 0 0 chr10 1911330 1911370 -143677918 + (TG)n Simple_repeat Simple_repeat 2 41 0 2843 200 38 22 chr10 1911376 1912091 -143677197 + ERVL LTR ERVL 3105 3830 -1934 327 203 0 0 chr10 1912117 1912186 -143677102 + (TG)n Simple_repeat Simple_repeat 2 70 0 700 193 0 8 chr10 1912515 1912634 -143676654 - AluJb SINE Alu -183 129 12 1843 158 0 7 chr10 1912853 1913156 -143676132 + AluJo SINE Alu 1 301 -11 204 245 0 0 chr10 1913831 1913880 -143675408 + T-rich Low_complexity Low_complexity 1 49 0 216 314 0 0 chr10 1913981 1914051 -143675237 + T-rich Low_complexity Low_complexity 2 71 0 2207 124 0 0 chr10 1919600 1919907 -143669381 - AluSg SINE Alu -3 307 1 205 161 0 0 chr10 1920492 1920523 -143668765 + (TTCA)n Simple_repeat Simple_repeat 3 33 0 224 291 0 0 chr10 1920525 1920580 -143668708 - L2 LINE L2 -6 3307 3253 1874 143 0 34 chr10 1921093 1921417 -143667871 + AluSx SINE Alu 1 314 0 461 299 65 23 chr10 1921932 1922283 -143667005 + LTR16C LTR ERVL 124 489 -2 1378 216 28 48 chr10 1923063 1923340 -143665948 - MLT1C LTR MaLR -14 453 187 2544 74 0 0 chr10 1923340 1923651 -143665637 - AluY SINE Alu 0 311 1 1378 216 28 48 chr10 1923651 1923835 -143665453 - MLT1C LTR MaLR -280 187 1 299 234 0 39 chr10 1924233 1924310 -143664978 + CT-rich Low_complexity Low_complexity 3 76 0 28 107 0 0 chr10 1924708 1924820 -143664468 + AT_rich Low_complexity Low_complexity 1 112 0 343 325 32 0 chr10 1925161 1925287 -143664001 + MIR SINE MIR 16 145 -117 601 333 51 30 chr10 1927271 1927607 -143661681 - L2 LINE L2 -711 2603 2261 474 228 43 47 chr10 1927623 1927855 -143661433 + MER76 LTR ERV 1 231 -457 2195 96 7 0 chr10 1928722 1929025 -143660263 + AluSg SINE Alu 1 305 -5 2300 111 0 0 chr10 1930865 1931171 -143658117 + AluSq SINE Alu 2 307 -6 6186 277 46 26 chr10 1931318 1932951 -143656337 - L1MCb LINE L1 -758 5806 4206 1614 170 0 47 chr10 1932951 1933269 -143656019 - AluJb SINE Alu -2 310 8 6186 277 46 26 chr10 1933269 1934890 -143654398 - L1MCb LINE L1 -2358 4206 2589 2722 31 0 0 chr10 1934890 1935210 -143654078 + L1PA4 LINE L1 5833 6152 -3 6186 277 46 26 chr10 1935210 1935501 -143653787 - L1MCb LINE L1 -3975 2589 2305 2279 263 60 24 chr10 1935652 1937376 -143651912 - L1MCb LINE L1 -4545 2019 122 513 326 15 34 chr10 1937515 1937777 -143651511 - L1MC4 LINE L1 -939 6904 6587 403 285 135 53 chr10 1937897 1938695 -143650593 - L1MC4a LINE L1 -1193 6615 5728 208 204 0 61 chr10 1939234 1939283 -143650005 + L2 LINE L2 3187 3232 -81 21 36 0 0 chr10 1939482 1939510 -143649778 + AT_rich Low_complexity Low_complexity 1 28 0 229 261 137 13 chr10 1939516 1939669 -143649619 + L1MC/D LINE L1 5305 5476 -2332 246 266 0 0 chr10 1940765 1940844 -143648444 + (TG)n Simple_repeat Simple_repeat 1 79 0 252 0 0 0 chr10 1941454 1941482 -143647806 + (A)n Simple_repeat Simple_repeat 1 28 0 363 307 85 28 chr10 1943253 1943465 -143645823 - MIR SINE MIR -12 250 27 234 91 0 0 chr10 1945037 1945070 -143644218 + (TG)n Simple_repeat Simple_repeat 2 34 0 916 99 0 23 chr10 1945611 1945742 -143643546 + Charlie3 DNA MER1_type 2347 2474 -236 624 322 120 7 chr10 1945767 1946226 -143643062 + L2 LINE L2 1415 1925 -1389 421 227 104 25 chr10 1947874 1948037 -143641251 - MLT1F LTR MaLR -8 534 359 192 125 0 0 chr10 1949026 1949058 -143640230 + (A)n Simple_repeat Simple_repeat 1 32 0 23 33 0 0 chr10 1949178 1949208 -143640080 + AT_rich Low_complexity Low_complexity 1 30 0 1431 175 137 30 chr10 1949879 1950216 -143639072 - THE1C LTR MaLR -2 373 1 856 210 0 0 chr10 1950409 1950576 -143638712 - AluJb SINE Alu -9 303 137 21 0 0 0 chr10 1950998 1951019 -143638269 + AT_rich Low_complexity Low_complexity 1 21 0 2151 174 12 26 chr10 1951019 1951443 -143637845 - L1MA7 LINE L1 0 6291 5874 1996 116 17 33 chr10 1951729 1952030 -143637258 + AluJb SINE Alu 3 298 -14 232 309 0 0 chr10 1952344 1952428 -143636860 + (TA)n Simple_repeat Simple_repeat 2 85 0 1450 134 138 79 chr10 1952991 1953282 -143636006 - AluJb SINE Alu -4 308 1 457 275 116 21 chr10 1953652 1954047 -143635241 + MLT1H LTR MaLR 72 527 -22 292 359 0 9 chr10 1954342 1954448 -143634840 + MLT1-int LTR MaLR 441 545 -826 210 71 0 0 chr10 1956315 1956343 -143632945 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 371 300 47 107 chr10 1956852 1957152 -143632136 + L1ME3 LINE L1 204 485 -6078 1454 284 55 22 chr10 1957235 1957870 -143631418 + L1ME1 LINE L1 5506 6161 -5 1131 274 41 19 chr10 1957867 1958453 -143630835 + L1ME3 LINE L1 1630 2403 -4160 * 2850 261 76 57 chr10 1958522 1958559 -143630729 + L1ME3 LINE L1 3652 3687 -2670 1840 124 16 0 chr10 1958559 1958817 -143630471 + AluSq SINE Alu 34 295 -18 2850 261 76 57 chr10 1958817 1960968 -143628320 + L1ME3 LINE L1 3687 5875 -482 25 51 0 0 chr10 1961089 1961128 -143628160 + AT_rich Low_complexity Low_complexity 1 39 0 6538 137 7 1 chr10 1961145 1962361 -143626927 - L1PB1 LINE L1 -1 6150 4925 936 266 113 11 chr10 1962362 1962715 -143626573 + L1ME3 LINE L1 5992 6380 -18 2491 70 0 0 chr10 1962945 1963246 -143626042 - AluY SINE Alu -10 301 1 28 48 0 0 chr10 1963460 1963502 -143625786 + AT_rich Low_complexity Low_complexity 1 42 0 494 31 16 0 chr10 1964361 1964425 -143624863 + (TTCC)n Simple_repeat Simple_repeat 4 68 0 235 306 83 17 chr10 1964936 1965116 -143624172 - L1MCc LINE L1 -5972 451 260 2256 93 7 0 chr10 1965484 1965773 -143623515 - AluSx SINE Alu -21 291 1 618 242 0 0 chr10 1966526 1966658 -143622630 - L1PB4 LINE L1 -2 6154 6023 249 196 0 0 chr10 1966844 1966895 -143622393 + (TATATG)n Simple_repeat Simple_repeat 4 54 0 39 22 0 0 chr10 1967696 1967742 -143621546 + AT_rich Low_complexity Low_complexity 1 46 0 192 40 0 0 chr10 1968546 1968571 -143620717 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 213 196 0 0 chr10 1969033 1969079 -143620209 + (CA)n Simple_repeat Simple_repeat 2 47 0 2130 125 3 0 chr10 1969567 1969862 -143619426 - AluSg SINE Alu -14 296 1 328 228 139 0 chr10 1971591 1971692 -143617596 + MLT1E LTR MaLR 22 136 -457 837 236 75 12 chr10 1971776 1972017 -143617271 + MLT1E LTR MaLR 289 544 -49 522 304 34 29 chr10 1972085 1972292 -143616996 + MIR SINE MIR 23 230 -32 686 268 115 102 chr10 1973543 1975112 -143614176 - HAL1 LINE L1 -110 2397 808 279 328 86 27 chr10 1975544 1975730 -143613558 - MIR SINE MIR -19 243 47 470 128 0 70 chr10 1976267 1976353 -143612935 + MADE1 DNA Mariner 1 80 0 4588 51 45 4 chr10 1976425 1976978 -143612310 - L1PA7 LINE L1 -7 6147 5572 216 319 104 52 chr10 1977892 1978027 -143611261 + MIR SINE MIR 47 188 -74 2158 228 84 16 chr10 1978998 1979603 -143609685 + L1MB5 LINE L1 5529 6174 0 294 50 0 0 chr10 1979620 1979660 -143609628 + L1MB4 LINE L1 6139 6178 -2 360 55 36 0 chr10 1979661 1979716 -143609572 - Alu SINE Alu 0 300 244 2320 103 0 0 chr10 1979826 1980136 -143609152 - AluY SINE Alu 0 311 2 207 0 0 0 chr10 1980735 1980758 -143608530 + (T)n Simple_repeat Simple_repeat 1 23 0 643 274 96 5 chr10 1980928 1981147 -143608141 - MIR SINE MIR -20 242 4 231 277 69 40 chr10 1982237 1982338 -143606950 - MER5A DNA MER1_type -48 141 38 188 286 58 52 chr10 1982439 1982593 -143606695 - MIR SINE MIR -106 156 2 31 58 0 0 chr10 1983629 1983681 -143605607 + AT_rich Low_complexity Low_complexity 1 52 0 225 57 38 57 chr10 1984239 1984292 -143604996 + (TAGA)n Simple_repeat Simple_repeat 4 55 0 581 106 33 50 chr10 1984325 1984505 -143604783 + (TAGA)n Simple_repeat Simple_repeat 3 179 0 598 115 59 49 chr10 1984519 1984992 -143604296 + (TAGA)n Simple_repeat Simple_repeat 1 477 0 1749 173 0 19 chr10 1985121 1985433 -143603855 + AluJb SINE Alu 7 312 0 302 80 20 0 chr10 1986353 1986403 -143602885 + (CAAAA)n Simple_repeat Simple_repeat 1 51 0 554 0 15 0 chr10 1986436 1986502 -143602786 + (TAGA)n Simple_repeat Simple_repeat 2 68 0 315 0 0 0 chr10 1987012 1987047 -143602241 + (CA)n Simple_repeat Simple_repeat 2 36 0 364 181 60 45 chr10 1987479 1987612 -143601676 - LTR16A1 LTR ERVL -1 456 322 206 246 44 9 chr10 1988109 1988223 -143601065 + (TTATA)n Simple_repeat Simple_repeat 1 118 0 258 250 34 34 chr10 1988235 1988411 -143600877 + (TTATA)n Simple_repeat Simple_repeat 5 180 0 359 322 28 17 chr10 1988690 1988703 -143600585 + MIR SINE MIR 77 88 -174 1860 162 88 20 chr10 1988703 1989054 -143600234 + THE1C LTR MaLR 1 375 0 359 322 28 17 chr10 1989054 1989220 -143600068 + MIR SINE MIR 88 258 -4 2247 105 3 16 chr10 1989775 1990081 -143599207 + AluSx SINE Alu 1 302 -10 61 37 0 0 chr10 1991441 1991523 -143597765 + AT_rich Low_complexity Low_complexity 1 82 0 24 0 0 0 chr10 1992066 1992090 -143597198 + AT_rich Low_complexity Low_complexity 1 24 0 3316 109 10 41 chr10 1992101 1992616 -143596672 - L1MA1 LINE L1 -4 6298 5800 701 139 9 5 chr10 1992652 1992781 -143596507 - L1ME LINE L1 -358 5806 5676 541 92 26 13 chr10 1994286 1994362 -143594926 - MADE1 DNA Mariner 0 80 4 21 36 0 0 chr10 1994367 1994395 -143594893 + AT_rich Low_complexity Low_complexity 1 28 0 319 298 30 23 chr10 1994455 1994586 -143594702 - MER115 DNA AcHobo -11 682 551 859 140 0 22 chr10 1995654 1995790 -143593498 + AluSq/x SINE Alu 1 133 -180 2123 126 0 31 chr10 1995792 1996109 -143593179 + AluSx SINE Alu 1 307 -5 675 282 78 3 chr10 1997127 1997475 -143591813 - LTR16A LTR ERVL -20 430 57 23 68 0 0 chr10 1998263 1998307 -143590981 + AT_rich Low_complexity Low_complexity 1 44 0 836 263 127 58 chr10 1998891 1999324 -143589964 + MLT1C LTR MaLR 1 463 -4 1982 234 29 29 chr10 1999328 1999762 -143589526 + MLT1C-int LTR MaLR 1 414 -957 2001 112 63 0 chr10 1999762 2000047 -143589241 + AluSc SINE Alu 1 303 -6 1982 234 29 29 chr10 2000047 2000285 -143589003 + MLT1C-int LTR MaLR 414 650 -721 1106 256 86 14 chr10 2000356 2000704 -143588584 + MLT1C-int LTR MaLR 974 1346 -25 1088 228 66 89 chr10 2000715 2001185 -143588103 + MLT1C LTR MaLR 1 459 -8 213 338 0 0 chr10 2001228 2001305 -143587983 + MIR SINE MIR 67 143 -65 21 36 0 0 chr10 2002114 2002142 -143587146 + AT_rich Low_complexity Low_complexity 1 28 0 2469 101 51 25 chr10 2002238 2002593 -143586695 - THE1B LTR MaLR 0 364 1 2188 118 7 7 chr10 2002825 2003131 -143586157 - AluSc SINE Alu -3 306 1 29 28 0 0 chr10 2003359 2003395 -143585893 + AT_rich Low_complexity Low_complexity 1 36 0 259 269 219 17 chr10 2004859 2005097 -143584191 - L2 LINE L2 -2740 574 289 1432 247 31 3 chr10 2006778 2007130 -143582158 + MLT1A1 LTR MaLR 1 362 -3 1857 145 16 10 chr10 2007909 2007977 -143581311 - AluSx SINE Alu 0 589 523 1114 47 0 62 chr10 2007977 2008169 -143581119 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1857 145 16 10 chr10 2008169 2008496 -143580792 - AluSx SINE Alu -66 523 1 443 248 20 13 chr10 2010184 2010490 -143578798 + (TG)n Simple_repeat Simple_repeat 1 308 0 8052 135 2 1 chr10 2010820 2012036 -143577252 - L1P LINE L1 -1411 4735 3518 788 118 8 0 chr10 2012072 2012199 -143577089 + (GGAA)n Simple_repeat Simple_repeat 2 129 0 425 259 130 12 chr10 2013457 2013619 -143575669 - MLT1G1 LTR MaLR -388 207 27 1554 243 19 3 chr10 2013670 2014049 -143575239 + MLT1B LTR MaLR 4 388 -2 1988 145 3 0 chr10 2015863 2016170 -143573118 - AluSx SINE Alu 0 308 1 222 37 0 0 chr10 2016201 2016228 -143573060 + (TG)n Simple_repeat Simple_repeat 1 27 0 1658 243 39 0 chr10 2016642 2017054 -143572234 - MLT2B1 LTR ERVL -2 518 91 678 211 7 26 chr10 2017353 2017505 -143571783 - MLT2B2 LTR ERVL -366 149 1 722 188 12 6 chr10 2018902 2019233 -143570055 + (CAT)n Simple_repeat Simple_repeat 1 333 0 4962 208 52 18 chr10 2020193 2021332 -143567956 + L1MC2 LINE L1 19 1196 -5230 8057 239 35 41 chr10 2021338 2021742 -143567546 + L1MC2 LINE L1 2756 3161 -3463 2072 150 3 6 chr10 2021742 2022055 -143567233 + AluSx SINE Alu 1 312 0 8057 239 35 41 chr10 2022055 2024293 -143564995 + L1MC2 LINE L1 3161 5365 -1259 2191 98 10 14 chr10 2024293 2024588 -143564700 - AluSg1 SINE Alu -15 294 1 8057 239 35 41 chr10 2024588 2025391 -143563897 + L1MC2 LINE L1 5365 6172 -452 2807 180 19 6 chr10 2025391 2025908 -143563380 + L1MC1 LINE L1 5810 6333 0 22 35 0 0 chr10 2027001 2027030 -143562258 + AT_rich Low_complexity Low_complexity 1 29 0 7814 38 2 2 chr10 2027329 2028578 -143560710 - L1PA5 LINE L1 -4 6150 4904 339 286 78 39 chr10 2028822 2029077 -143560211 + MLT2E LTR ERVL 342 606 -22 237 337 21 11 chr10 2029309 2029404 -143559884 + MLT-int LTR MaLR 423 518 -1217 2206 116 0 0 chr10 2029654 2029946 -143559342 + AluSx SINE Alu 5 296 -16 226 188 62 10 chr10 2030638 2030734 -143558554 + (CCGCG)n Simple_repeat Simple_repeat 1 101 0 193 122 24 49 chr10 2030749 2030831 -143558457 + (CCGCG)n Simple_repeat Simple_repeat 4 83 0 206 115 19 39 chr10 2030831 2030883 -143558405 + C-rich Low_complexity Low_complexity 5 55 0 56 39 0 0 chr10 2030883 2030960 -143558328 + GC_rich Low_complexity Low_complexity 1 77 0 32 43 0 0 chr10 2030988 2031034 -143558254 + GC_rich Low_complexity Low_complexity 1 46 0 2294 129 8 6 chr10 2031062 2031418 -143557870 + MER4D LTR ERV1 547 903 0 1168 134 18 80 chr10 2031522 2031746 -143557542 + AluJb SINE Alu 82 291 -21 486 75 0 0 chr10 2031747 2031814 -143557474 + (TAGA)n Simple_repeat Simple_repeat 2 68 0 619 300 57 17 chr10 2032052 2032352 -143556936 - L1ME3A LINE L1 -301 5869 5558 258 301 16 78 chr10 2032367 2032420 -143556868 - L1ME3A LINE L1 -875 5271 5216 2047 115 7 3 chr10 2032420 2032706 -143556582 - AluSq SINE Alu -26 287 1 258 301 16 78 chr10 2032706 2032845 -143556443 - L1ME3A LINE L1 -930 5216 5091 336 48 0 0 chr10 2032978 2033020 -143556268 + (TG)n Simple_repeat Simple_repeat 2 43 0 313 319 39 16 chr10 2033055 2033237 -143556051 - L1ME3A LINE L1 -1199 4947 4762 21 0 0 0 chr10 2033389 2033410 -143555878 + AT_rich Low_complexity Low_complexity 1 21 0 559 86 0 0 chr10 2033457 2033527 -143555761 - U6 snRNA snRNA 0 107 38 358 309 88 10 chr10 2033529 2033733 -143555555 - L1ME3A LINE L1 -1369 4777 4558 393 276 116 36 chr10 2033737 2034038 -143555250 - L1ME3A LINE L1 -2458 3688 3364 1196 257 82 23 chr10 2034084 2034890 -143554398 - L1M4 LINE L1 -1390 5254 4362 388 137 0 82 chr10 2035015 2035088 -143554200 - MSTD LTR MaLR -328 68 2 237 261 26 26 chr10 2035089 2035204 -143554084 - L1 LINE L1 -2351 4293 4179 22 0 0 0 chr10 2035208 2035230 -143554058 + AT_rich Low_complexity Low_complexity 1 22 0 957 276 46 39 chr10 2035327 2035577 -143553711 - L1M4 LINE L1 -4543 2103 1847 222 37 0 0 chr10 2035577 2035604 -143553684 + (TTTC)n Simple_repeat Simple_repeat 4 30 0 957 276 46 39 chr10 2035604 2035787 -143553501 - L1M4 LINE L1 -4799 1847 1667 * 2064 272 25 53 chr10 2035784 2036541 -143552747 - L1M4 LINE L1 -5794 748 13 234 0 71 24 chr10 2036601 2036643 -143552645 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 478 346 62 62 chr10 2038349 2038565 -143550723 + HAL1 LINE L1 51 266 -2241 1700 177 17 7 chr10 2038565 2038864 -143550424 + AluJb SINE Alu 3 304 -8 478 346 62 62 chr10 2038864 2038965 -143550323 + HAL1 LINE L1 266 366 -2141 1390 246 33 87 chr10 2038965 2039515 -143549773 + MLT2B1 LTR ERVL 1 520 0 478 346 62 62 chr10 2039515 2040081 -143549207 + HAL1 LINE L1 365 935 -1572 825 167 24 0 chr10 2040090 2040216 -143549072 + AluJb SINE Alu 136 264 -48 225 0 0 0 chr10 2040217 2040242 -143549046 + (GA)n Simple_repeat Simple_repeat 2 26 0 319 258 154 49 chr10 2040251 2040354 -143548934 + HAL1 LINE L1 965 1056 -1451 267 253 0 48 chr10 2040354 2040379 -143548909 + AluYb8 SINE Alu 112 132 -176 2459 53 7 7 chr10 2040379 2040681 -143548607 + AluY SINE Alu 1 302 -9 319 258 154 49 chr10 2040437 2040858 -143548430 + HAL1 LINE L1 1056 1302 -1205 791 295 56 36 chr10 2040880 2041270 -143548018 + HAL1 LINE L1 1483 1880 -627 24 0 0 0 chr10 2041696 2041720 -143547568 + AT_rich Low_complexity Low_complexity 1 24 0 248 263 62 56 chr10 2041726 2041905 -143547383 + L1MC4a LINE L1 5594 5773 -2035 433 182 34 7 chr10 2041908 2042056 -143547232 + (TAGA)n Simple_repeat Simple_repeat 4 155 0 1191 133 0 0 chr10 2042148 2042321 -143546967 - AluSg/x SINE Alu -3 309 137 345 181 0 56 chr10 2042322 2042394 -143546894 - AluJ/FLAM SINE Alu -234 68 1 260 154 135 39 chr10 2042418 2042522 -143546766 + L1MC4a LINE L1 5866 5979 -1829 5288 37 2 0 chr10 2042879 2043469 -143545819 - LTR10C LTR ERV1 0 591 1 324 0 0 0 chr10 2044398 2044434 -143544854 + (CATA)n Simple_repeat Simple_repeat 2 37 0 679 54 0 21 chr10 2047232 2047325 -143541963 + L1PA5 LINE L1 6064 6154 0 779 90 90 45 chr10 2047325 2047457 -143541831 + L1PA16 LINE L1 6025 6164 -2 5274 228 54 65 chr10 2047500 2048444 -143540844 - L1MC3 LINE L1 -12 7773 6820 180 0 0 0 chr10 2048444 2048464 -143540824 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 5274 228 54 65 chr10 2048464 2048603 -143540685 - L1MC3 LINE L1 -965 6820 6681 1304 161 150 29 chr10 2048603 2048877 -143540411 + AluSg1 SINE Alu 1 307 -2 5274 228 54 65 chr10 2048877 2049548 -143539740 - L1MC3 LINE L1 -1104 6681 6037 1734 176 0 23 chr10 2050070 2050377 -143538911 - AluJo SINE Alu -12 300 1 330 328 174 44 chr10 2051244 2051860 -143537428 - L1MEd LINE L1 -5218 901 206 439 307 168 27 chr10 2052338 2052892 -143536396 + L1MC4 LINE L1 7270 7901 -141 189 0 0 0 chr10 2052894 2052915 -143536373 + (TA)n Simple_repeat Simple_repeat 2 22 0 209 225 28 14 chr10 2052952 2053023 -143536265 + GA-rich Low_complexity Low_complexity 1 72 0 21 57 0 0 chr10 2053097 2053132 -143536156 + AT_rich Low_complexity Low_complexity 1 35 0 576 326 80 32 chr10 2053275 2053669 -143535619 - L2 LINE L2 -1 3312 2890 935 84 0 53 chr10 2053669 2053859 -143535429 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 576 326 80 32 chr10 2053859 2053937 -143535351 - L2 LINE L2 -423 2890 2817 1241 148 10 1 chr10 2054056 2056357 -143532931 + ALR/Alpha Satellite centromeric 1 2322 -21 1217 163 7 1 chr10 2056463 2059702 -143529586 + ALR/Alpha Satellite centromeric 1 3259 -28 1460 204 99 3 chr10 2060698 2061031 -143528257 + MLT1A1 LTR MaLR 1 365 0 233 206 0 15 chr10 2061627 2061695 -143527593 + CT-rich Low_complexity Low_complexity 5 71 0 489 355 37 25 chr10 2062231 2062555 -143526733 + L1MEc LINE L1 45 372 -6024 393 284 133 33 chr10 2062899 2063110 -143526178 + L1MEc LINE L1 786 1017 -5379 1950 288 114 52 chr10 2063136 2064314 -143524974 + L1MCc LINE L1 17 1306 -5278 1977 151 14 0 chr10 2064314 2064605 -143524683 - AluSx SINE Alu -17 295 1 1950 288 114 52 chr10 2064605 2065022 -143524266 + L1MCc LINE L1 1306 1696 -4888 1909 155 3 0 chr10 2065462 2065753 -143523535 - AluJb SINE Alu -20 292 1 359 270 203 31 chr10 2065768 2065931 -143523357 + HAL1 LINE L1 1701 1891 -616 2287 68 0 17 chr10 2066628 2066921 -143522367 + AluY SINE Alu 1 288 -23 1566 185 83 19 chr10 2067391 2067716 -143521572 - MER7A DNA MER2_type -2 344 1 273 306 25 64 chr10 2067767 2067924 -143521364 - MER5A DNA MER1_type -4 185 35 1934 50 0 25 chr10 2069390 2069632 -143519656 - L1PA8 LINE L1 -7 6165 5930 383 284 245 29 chr10 2070469 2070603 -143518685 + L2 LINE L2 1232 1336 -1978 279 0 0 0 chr10 2070603 2070634 -143518654 + (CA)n Simple_repeat Simple_repeat 1 31 0 383 284 245 29 chr10 2070634 2070707 -143518581 + L2 LINE L2 1336 1484 -1830 1206 135 6 0 chr10 2070722 2070900 -143518388 + AluSq SINE Alu 134 312 -1 981 256 49 47 chr10 2071594 2072027 -143517261 + L1M4 LINE L1 4597 5033 -1113 2787 22 0 10 chr10 2072027 2072341 -143516947 + AluY SINE Alu 1 311 0 981 256 49 47 chr10 2072341 2072418 -143516870 + L1M4 LINE L1 5033 5108 -1038 2596 147 18 35 chr10 2072690 2073072 -143516216 + MSTA LTR MaLR 1 388 -40 2251 104 3 0 chr10 2073072 2073361 -143515927 + AluSp SINE Alu 1 290 -23 306 0 0 0 chr10 2073364 2073398 -143515890 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 2596 147 18 35 chr10 2073398 2073446 -143515842 + MSTA LTR MaLR 390 428 0 245 283 0 0 chr10 2073723 2073783 -143515505 + L2 LINE L2 3254 3313 0 365 167 0 0 chr10 2074714 2074774 -143514514 - L1MA5 LINE L1 -220 6080 6021 1267 118 10 20 chr10 2074792 2074996 -143514292 + L1MA5 LINE L1 6095 6296 -4 259 395 27 37 chr10 2075568 2075864 -143513424 + L3 LINE CR1 163 455 -1122 27 73 0 0 chr10 2076388 2076443 -143512845 + AT_rich Low_complexity Low_complexity 1 55 0 1210 229 85 15 chr10 2077243 2077645 -143511643 + MER31B LTR ERV1 1 430 -36 182 244 111 0 chr10 2078424 2078469 -143510819 + MIR SINE MIR 48 97 -165 339 233 282 6 chr10 2078776 2078939 -143510349 - L1MC4 LINE L1 -1115 6927 6720 403 252 8 31 chr10 2080534 2080661 -143508627 + MIR SINE MIR 2 125 -137 407 286 44 20 chr10 2080815 2081018 -143508270 - L2 LINE L2 -1391 1923 1716 225 194 11 43 chr10 2081028 2081121 -143508167 + (TG)n Simple_repeat Simple_repeat 2 91 0 4988 213 37 25 chr10 2083324 2084889 -143504399 - L1MC1 LINE L1 -18 6298 4720 247 248 0 59 chr10 2084888 2084989 -143504299 - L1MC1 LINE L1 -1817 4312 4218 * 619 122 0 0 chr10 2085229 2085311 -143503977 + AluSg/x SINE Alu 212 293 -17 1545 234 30 55 chr10 2085597 2086072 -143503216 + MLT1C LTR MaLR 5 467 0 214 315 36 27 chr10 2086490 2086601 -143502687 - MIR3 SINE MIR -28 180 69 298 250 40 0 chr10 2086990 2087066 -143502222 + MER45A DNA AcHobo 99 177 -1 726 309 105 69 chr10 2089072 2089225 -143500063 - L1MC1 LINE L1 -4870 1249 1103 367 19 19 19 chr10 2089225 2089278 -143500010 + (CA)n Simple_repeat Simple_repeat 2 54 0 726 309 105 69 chr10 2089278 2090445 -143498843 - L1MC1 LINE L1 -5016 1103 2 333 221 47 12 chr10 2090515 2090601 -143498687 + LTR16A LTR ERVL 53 141 -309 246 269 34 42 chr10 2090701 2090820 -143498468 + LTR16A LTR ERVL 303 420 -30 1882 168 0 13 chr10 2091225 2091523 -143497765 + AluSx SINE Alu 1 294 -18 22 80 0 0 chr10 2092303 2092353 -143496935 + AT_rich Low_complexity Low_complexity 1 50 0 1718 71 0 0 chr10 2092433 2092644 -143496644 - AluY SINE Alu -18 293 83 405 174 23 23 chr10 2092645 2092731 -143496557 + MLT1A2 LTR MaLR 127 212 -162 2035 118 0 57 chr10 2092744 2093058 -143496230 + AluSx SINE Alu 3 298 -14 430 341 32 23 chr10 2093122 2093339 -143495949 + MIR SINE MIR 44 262 0 603 222 98 31 chr10 2093841 2094035 -143495253 + MER3 DNA MER1_type 3 209 0 1746 122 34 27 chr10 2094348 2094643 -143494645 - AluSx SINE Alu -15 297 1 25 0 0 0 chr10 2096446 2096471 -143492817 + AT_rich Low_complexity Low_complexity 1 25 0 836 197 58 114 chr10 2096832 2097228 -143492060 - MLT1A2 LTR MaLR 0 374 1 662 301 119 13 chr10 2097902 2098290 -143490998 + MLT1G LTR MaLR 68 496 -94 915 308 32 22 chr10 2098899 2099302 -143489986 - MLT1I LTR MaLR -2 407 1 23 0 0 0 chr10 2099630 2099653 -143489635 + AT_rich Low_complexity Low_complexity 1 23 0 220 203 0 86 chr10 2101132 2101329 -143487959 + (GTGTG)n Simple_repeat Simple_repeat 1 180 0 339 273 19 73 chr10 2101587 2101740 -143487548 - MIR3 SINE MIR -67 141 10 615 142 20 81 chr10 2102980 2103128 -143486160 - L1M LINE L1 -775 5393 5255 251 154 0 19 chr10 2103574 2103626 -143485662 + CT-rich Low_complexity Low_complexity 1 51 0 375 283 71 45 chr10 2103966 2104164 -143485124 - L2 LINE L2 -10 3303 3101 1523 180 58 6 chr10 2104345 2104490 -143484798 - L1ME LINE L1 -712 5454 5318 276 30 0 0 chr10 2104490 2104523 -143484765 + (ATG)n Simple_repeat Simple_repeat 2 34 0 1523 180 58 6 chr10 2104523 2104779 -143484509 - L1ME LINE L1 -848 5318 5043 2959 185 100 14 chr10 2104785 2105086 -143484202 + L1MB1 LINE L1 5463 5737 -431 438 20 0 0 chr10 2105086 2105137 -143484151 + (TG)n Simple_repeat Simple_repeat 1 51 0 2959 185 100 14 chr10 2105137 2105484 -143483804 + L1MB1 LINE L1 5737 6167 -1 297 63 16 63 chr10 2105525 2105588 -143483700 + (GGA)n Simple_repeat Simple_repeat 3 62 0 306 194 0 16 chr10 2106326 2106388 -143482900 - MER31B LTR ERV1 0 466 406 2006 264 31 16 chr10 2107029 2107736 -143481552 - L1ME LINE L1 -2227 3919 3202 824 214 5 20 chr10 2107737 2107933 -143481355 - AluJo SINE Alu -1 311 119 2648 260 65 7 chr10 2107933 2108891 -143480397 - L1ME LINE L1 -2961 3185 2173 198 356 79 28 chr10 2110116 2110332 -143478956 + MIR SINE MIR 34 260 -2 396 0 0 0 chr10 2110973 2111017 -143478271 + (CA)n Simple_repeat Simple_repeat 2 45 0 237 163 0 0 chr10 2111017 2111066 -143478222 + (TA)n Simple_repeat Simple_repeat 1 49 0 2199 125 29 35 chr10 2111068 2111445 -143477843 + THE1C LTR MaLR 1 375 0 902 199 49 135 chr10 2112672 2113079 -143476209 + MLT1B LTR MaLR 1 372 -18 411 238 67 50 chr10 2113899 2114139 -143475149 - L1MC5 LINE L1 -102 7859 7616 35 0 0 0 chr10 2114339 2114374 -143474914 + AT_rich Low_complexity Low_complexity 1 35 0 25 95 0 0 chr10 2114401 2114475 -143474813 + AT_rich Low_complexity Low_complexity 1 74 0 1481 176 37 11 chr10 2115827 2116100 -143473188 - AluJo SINE Alu -32 280 1 33 0 0 0 chr10 2117336 2117369 -143471919 + AT_rich Low_complexity Low_complexity 1 33 0 21 36 0 0 chr10 2120223 2120251 -143469037 + AT_rich Low_complexity Low_complexity 1 28 0 225 230 0 0 chr10 2121607 2121733 -143467555 + (TG)n Simple_repeat Simple_repeat 2 127 0 437 218 6 0 chr10 2121776 2121946 -143467342 + (TG)n Simple_repeat Simple_repeat 2 172 0 22 0 0 0 chr10 2122725 2122747 -143466541 + AT_rich Low_complexity Low_complexity 1 22 0 297 330 26 0 chr10 2122894 2123009 -143466279 + MIR SINE MIR 30 147 -61 2194 85 0 30 chr10 2125231 2125536 -143463752 + AluSc SINE Alu 1 296 -13 458 262 25 98 chr10 2125655 2125899 -143463389 - L1MC3 LINE L1 -7 7778 7553 1404 201 28 14 chr10 2126325 2126614 -143462674 + AluJo SINE Alu 1 293 -19 22 0 0 0 chr10 2126636 2126658 -143462630 + AT_rich Low_complexity Low_complexity 1 22 0 186 167 0 0 chr10 2126680 2126716 -143462572 + GA-rich Low_complexity Low_complexity 2 37 0 1962 128 6 35 chr10 2126833 2127145 -143462143 - AluSx SINE Alu -9 303 1 198 269 13 51 chr10 2127878 2127956 -143461332 + MER5A DNA MER1_type 30 104 -85 2187 140 48 28 chr10 2129169 2129526 -143459762 + THE1B LTR MaLR 1 364 0 308 281 73 83 chr10 2130217 2130396 -143458892 + L1M4 LINE L1 3784 3963 -2183 2120 133 0 3 chr10 2130396 2130704 -143458584 + AluSx SINE Alu 1 307 -5 308 281 73 83 chr10 2130704 2130908 -143458380 + L1M4 LINE L1 3963 4163 -1983 2010 274 31 15 chr10 2131554 2132266 -143457022 - L1M4 LINE L1 -1017 5129 4407 188 234 0 16 chr10 2132266 2132330 -143456958 + CT-rich Low_complexity Low_complexity 1 63 0 921 189 98 20 chr10 2132346 2132428 -143456860 - L1MB3 LINE L1 -1 6182 6108 471 96 96 0 chr10 2132428 2132501 -143456787 + MADE1 DNA Mariner 1 80 0 921 189 98 20 chr10 2132501 2132672 -143456616 - L1MB3 LINE L1 -75 6108 5909 803 148 19 39 chr10 2133302 2133457 -143455831 - L1MA4 LINE L1 -16 6284 6133 534 185 99 0 chr10 2133789 2133940 -143455348 - L1MA4 LINE L1 -169 6131 5966 25 0 0 0 chr10 2136171 2136196 -143453092 + AT_rich Low_complexity Low_complexity 1 25 0 2562 58 3 0 chr10 2136288 2136597 -143452691 + AluY SINE Alu 1 310 -1 27 0 0 0 chr10 2136695 2136722 -143452566 + AT_rich Low_complexity Low_complexity 1 27 0 869 214 6 0 chr10 2136722 2136881 -143452407 - FRAM SINE Alu -19 157 1 1835 116 0 58 chr10 2139564 2139856 -143449432 + AluSx SINE Alu 32 306 -6 1672 173 13 86 chr10 2143577 2143832 -143445456 - MER39 LTR ERV1 -3 704 487 1578 119 13 0 chr10 2143832 2144058 -143445230 + AluSx SINE Alu 58 286 -26 1672 173 13 86 chr10 2144058 2144196 -143445092 - MER39 LTR ERV1 -220 487 340 926 266 43 14 chr10 2144276 2144554 -143444734 + MLT1F LTR MaLR 1 286 -256 277 273 23 68 chr10 2145714 2145890 -143443398 + (CAGCC)n Simple_repeat Simple_repeat 5 172 0 445 205 17 0 chr10 2146783 2146900 -143442388 + (TATG)n Simple_repeat Simple_repeat 2 120 0 238 194 32 16 chr10 2147426 2147488 -143441800 + GA-rich Low_complexity Low_complexity 2 64 0 1462 170 11 11 chr10 2149063 2149357 -143439931 + AluJo SINE Alu 12 305 0 251 333 52 26 chr10 2149642 2149795 -143439493 - MIR3 SINE MIR -33 175 19 1046 198 0 0 chr10 2149987 2150169 -143439119 - Tigger5 DNA MER2_type 0 2323 2142 187 333 17 0 chr10 2150979 2151039 -143438249 + L2 LINE L2 3200 3260 -12 231 61 0 0 chr10 2151905 2151938 -143437350 + (TG)n Simple_repeat Simple_repeat 2 34 0 1219 206 59 45 chr10 2152497 2153081 -143436207 + L1MCa LINE L1 1769 2452 -3974 782 237 59 0 chr10 2153092 2153278 -143436010 + MER74A LTR ERVL 43 239 -319 23 33 0 0 chr10 2153904 2153934 -143435354 + AT_rich Low_complexity Low_complexity 1 30 0 1817 113 0 12 chr10 2154422 2154679 -143434609 - AluSg SINE Alu -17 293 40 1106 65 7 0 chr10 2154681 2154819 -143434469 - AluSq/x SINE Alu -174 139 1 37 23 0 0 chr10 2155086 2155130 -143434158 + AT_rich Low_complexity Low_complexity 1 44 0 297 308 0 0 chr10 2155574 2155665 -143433623 + (TG)n Simple_repeat Simple_repeat 1 91 0 428 316 7 0 chr10 2155679 2155834 -143433454 + (TG)n Simple_repeat Simple_repeat 2 157 0 1578 99 130 16 chr10 2155921 2156202 -143433086 - AluSg1 SINE Alu 0 310 1 3332 110 18 18 chr10 2156447 2156602 -143432686 + MER75 DNA T2_type 3 157 -357 2128 99 11 0 chr10 2156602 2156907 -143432381 - AluSp SINE Alu 0 308 1 3332 110 18 18 chr10 2156907 2157248 -143432040 + MER75 DNA T2_type 156 500 -14 328 339 17 39 chr10 2157459 2157639 -143431649 - MER5B DNA MER1_type 0 178 3 3284 126 28 16 chr10 2159296 2159803 -143429485 - MER75 DNA T2_type -1 513 1 180 0 0 0 chr10 2160098 2160118 -143429170 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 479 239 68 106 chr10 2161195 2161517 -143427771 + MLT1H LTR MaLR 230 539 -10 25 31 0 0 chr10 2162043 2162075 -143427213 + AT_rich Low_complexity Low_complexity 1 32 0 25 31 0 0 chr10 2162544 2162576 -143426712 + AT_rich Low_complexity Low_complexity 1 32 0 1789 119 0 11 chr10 2162584 2162844 -143426444 + AluSc SINE Alu 1 257 -52 1856 142 57 0 chr10 2163461 2163792 -143425496 - L1MA5A LINE L1 0 6297 5948 777 232 130 72 chr10 2165405 2165750 -143423538 + MLT1D LTR MaLR 1 365 -140 2253 108 85 18 chr10 2166082 2166423 -143422865 + THE1B LTR MaLR 1 364 0 213 175 0 0 chr10 2168921 2168961 -143420327 + (CA)n Simple_repeat Simple_repeat 2 41 0 2141 120 0 10 chr10 2169092 2169108 -143420180 - AluSx SINE Alu -15 297 282 234 0 0 0 chr10 2169108 2169134 -143420154 + (TA)n Simple_repeat Simple_repeat 2 27 0 2141 120 0 10 chr10 2169134 2169417 -143419871 - AluSx SINE Alu -30 282 1 919 251 78 31 chr10 2169836 2170268 -143419020 + MLT1E LTR MaLR 46 593 0 24 0 0 0 chr10 2170999 2171023 -143418265 + AT_rich Low_complexity Low_complexity 1 24 0 506 339 13 34 chr10 2171974 2172210 -143417078 + HERV16 LTR ERVL 1317 1547 -3449 325 248 157 81 chr10 2172274 2172484 -143416804 + HERV16 LTR ERVL 1688 1913 -3083 601 337 28 17 chr10 2172667 2172955 -143416333 + HERV16 LTR ERVL 2221 2511 -3253 2004 135 0 0 chr10 2173557 2173858 -143415430 + AluSx SINE Alu 2 302 0 28 29 0 0 chr10 2174266 2174301 -143414987 + AT_rich Low_complexity Low_complexity 1 35 0 1796 137 4 0 chr10 2174312 2174575 -143414713 - AluSq SINE Alu -48 265 2 1363 194 19 0 chr10 2174575 2174832 -143414456 - L1PA16 LINE L1 -11 6155 5891 961 282 173 38 chr10 2175902 2176692 -143412596 + L2 LINE L2 1802 2698 -616 383 305 53 27 chr10 2176900 2177087 -143412201 + L2 LINE L2 3095 3286 -27 491 283 33 28 chr10 2177277 2177457 -143411831 + MIR SINE MIR 11 191 -71 205 204 61 34 chr10 2177780 2177927 -143411361 + (TTATA)n Simple_repeat Simple_repeat 2 152 0 27 29 0 0 chr10 2178059 2178093 -143411195 + AT_rich Low_complexity Low_complexity 1 34 0 820 133 44 0 chr10 2180349 2180483 -143408805 + Tigger1 DNA MER2_type 24 163 -2255 2160 167 33 31 chr10 2180483 2181032 -143408256 - MLT2A2 LTR ERVL 0 554 1 10566 131 52 31 chr10 2181043 2182010 -143407278 + Tigger1 DNA MER2_type 170 1193 -1225 1982 147 40 7 chr10 2182010 2182310 -143406978 + AluSx SINE Alu 1 310 -2 10566 131 52 31 chr10 2182310 2183135 -143406153 + Tigger1 DNA MER2_type 1193 1999 -419 1915 204 101 69 chr10 2183135 2183622 -143405666 + LTR9 LTR ERV1 1 512 -100 2544 54 3 19 chr10 2183622 2183938 -143405350 - AluY SINE Alu 0 311 1 1915 204 101 69 chr10 2183938 2184043 -143405245 + LTR9 LTR ERV1 512 612 0 * 2059 181 45 19 chr10 2184043 2184452 -143404836 + Tigger1 DNA MER2_type 1999 2418 0 1493 210 0 7 chr10 2184702 2184997 -143404291 + AluJo SINE Alu 1 293 -19 1908 176 0 3 chr10 2185287 2185599 -143403689 + AluSx SINE Alu 1 311 -1 261 0 0 0 chr10 2186053 2186082 -143403206 + (TG)n Simple_repeat Simple_repeat 1 29 0 288 105 0 0 chr10 2187256 2187294 -143401994 + Alu SINE Alu 1 38 -264 1115 190 26 4 chr10 2187383 2187615 -143401673 - MLT1B LTR MaLR -1 389 153 2479 35 6 26 chr10 2188835 2189146 -143400142 + AluY SINE Alu 1 305 -6 186 133 0 0 chr10 2189281 2189311 -143399977 + (CAAAA)n Simple_repeat Simple_repeat 5 34 0 4805 120 14 14 chr10 2189472 2190162 -143399126 - LTR8 LTR ERV1 0 691 2 26 0 0 0 chr10 2191096 2191122 -143398166 + AT_rich Low_complexity Low_complexity 1 26 0 227 349 9 9 chr10 2191612 2191718 -143397570 - MIR SINE MIR -108 154 49 2359 110 0 0 chr10 2191728 2192037 -143397251 - AluSq SINE Alu -4 309 1 2499 233 14 28 chr10 2192432 2193079 -143396209 - L1MC3 LINE L1 -7 7847 7210 2759 243 67 23 chr10 2193098 2194007 -143395281 - L1MC3 LINE L1 -743 5472 5001 1858 161 0 3 chr10 2194007 2194335 -143394953 - AluSx SINE Alu 0 327 1 2759 243 67 23 chr10 2194335 2195287 -143394001 - L1MC3 LINE L1 -1214 5001 4092 1703 272 127 41 chr10 2195288 2196997 -143392291 - L1MC3 LINE L1 -3712 2503 812 2216 109 3 3 chr10 2196997 2197308 -143391980 + AluSx SINE Alu 1 311 -1 1703 272 127 41 chr10 2197308 2197561 -143391727 - L1MC3 LINE L1 -5403 812 582 668 244 51 25 chr10 2197542 2197739 -143391549 - L1MC3 LINE L1 -6155 241 40 * 1455 151 4 21 chr10 2199398 2199637 -143389651 + AluSg/x SINE Alu 71 305 -7 759 180 0 16 chr10 2200502 2200685 -143388603 + (CA)n Simple_repeat Simple_repeat 1 180 0 585 312 42 64 chr10 2203314 2203766 -143385522 - LTR16A1 LTR ERVL 0 457 16 2027 204 24 5 chr10 2204067 2204483 -143384805 - MSTB LTR MaLR -2 424 1 264 263 50 0 chr10 2204487 2204567 -143384721 - L1MC/D LINE L1 -1920 5888 5805 23 0 0 0 chr10 2205363 2205386 -143383902 + AT_rich Low_complexity Low_complexity 1 23 0 350 239 20 107 chr10 2206592 2206789 -143382499 + HAL1 LINE L1 1384 1563 -944 552 185 0 0 chr10 2207090 2207182 -143382106 - AluJ/FLAM SINE Alu -220 92 1 2004 101 42 14 chr10 2207948 2208236 -143381052 + AluSx SINE Alu 1 296 -16 2309 206 37 85 chr10 2209196 2209683 -143379605 - L1MC2 LINE L1 -396 5948 5497 2051 138 10 0 chr10 2209683 2209973 -143379315 - AluSg SINE Alu -17 293 1 2309 206 37 85 chr10 2209973 2210346 -143378942 - L1MC2 LINE L1 -847 5497 5107 2273 71 0 0 chr10 2210750 2211071 -143378217 + AluY SINE Alu 1 321 0 2132 104 0 4 chr10 2211467 2211747 -143377541 - AluSq SINE Alu -34 279 1 203 363 29 0 chr10 2211861 2211963 -143377325 - MIR SINE MIR -58 204 100 1601 233 25 0 chr10 2212000 2212407 -143376881 - MER47B DNA MER2_type 0 418 2 274 243 21 95 chr10 2212938 2213181 -143376107 + L1MC5 LINE L1 7549 7773 -188 191 122 0 49 chr10 2213194 2213235 -143376053 + (GAAA)n Simple_repeat Simple_repeat 4 42 0 201 365 0 32 chr10 2213831 2213987 -143375301 + (CAATG)n Simple_repeat Simple_repeat 3 153 0 306 234 24 24 chr10 2214249 2214541 -143374747 + GA-rich Low_complexity Low_complexity 1 292 0 180 0 0 0 chr10 2215437 2215457 -143373831 + (TA)n Simple_repeat Simple_repeat 2 21 0 2191 115 0 0 chr10 2215463 2215758 -143373530 - AluSq SINE Alu -18 295 1 908 233 125 15 chr10 2215768 2216111 -143373177 - L1MC3 LINE L1 -1 7784 7404 3279 245 108 26 chr10 2216556 2217979 -143371309 - L1MC3 LINE L1 -335 7450 5919 202 314 115 32 chr10 2218240 2218396 -143370892 + L2 LINE L2 2614 2782 -532 754 194 22 0 chr10 2218415 2218554 -143370734 - FLAM_C SINE Alu 0 143 2 3966 24 0 0 chr10 2218563 2219024 -143370264 - L1PA3 LINE L1 0 6155 5695 32 26 0 0 chr10 2219086 2219125 -143370163 + AT_rich Low_complexity Low_complexity 1 39 0 296 195 23 35 chr10 2220546 2220633 -143368655 - MER53 DNA DNA -1 188 103 512 175 0 0 chr10 2221122 2221219 -143368069 - L1MA5A LINE L1 -10 6287 6191 753 239 157 11 chr10 2221668 2221948 -143367340 + MER33 DNA MER1_type 1 321 -3 1135 184 4 12 chr10 2222298 2222543 -143366745 - L1MA6 LINE L1 -1 6299 6057 295 109 0 0 chr10 2222568 2222614 -143366674 + L1M2 LINE L1 5444 5489 -811 1943 106 7 3 chr10 2222620 2222951 -143366337 + AluSx SINE Alu 1 332 0 529 329 112 47 chr10 2223442 2224276 -143365012 + L1M4 LINE L1 2225 3112 -3034 1779 106 13 0 chr10 2224455 2224690 -143364598 + AluSx SINE Alu 64 301 -11 424 287 103 0 chr10 2224976 2225112 -143364176 + MIR SINE MIR 4 153 -109 323 322 44 16 chr10 2227059 2227242 -143362046 - MER46C DNA MER2_type -46 292 105 298 176 22 33 chr10 2227518 2227609 -143361679 + (TA)n Simple_repeat Simple_repeat 1 90 0 28 61 0 0 chr10 2227644 2227693 -143361595 + AT_rich Low_complexity Low_complexity 1 49 0 302 136 64 16 chr10 2227705 2227830 -143361458 + (TA)n Simple_repeat Simple_repeat 2 132 0 297 133 20 41 chr10 2227869 2227967 -143361321 + (TA)n Simple_repeat Simple_repeat 1 96 0 395 196 68 7 chr10 2227981 2228249 -143361039 + (TA)n Simple_repeat Simple_repeat 1 284 0 24 32 0 0 chr10 2228375 2228406 -143360882 + AT_rich Low_complexity Low_complexity 1 31 0 243 61 0 0 chr10 2230150 2230183 -143359105 + (CAT)n Simple_repeat Simple_repeat 1 33 0 1428 250 57 38 chr10 2230320 2231456 -143357832 + L1MCb LINE L1 475 1638 -4885 1815 142 40 7 chr10 2231456 2231752 -143357536 + AluSx SINE Alu 1 306 -6 1428 250 57 38 chr10 2231752 2231788 -143357500 + L1MCb LINE L1 1638 1672 -4851 1246 222 104 21 chr10 2231786 2232265 -143357023 + L1M4 LINE L1 5312 5828 -346 * 2298 222 12 42 chr10 2232272 2232917 -143356371 - L1 LINE L1 -3311 2835 2210 219 338 95 0 chr10 2233284 2233358 -143355930 - L2 LINE L2 -38 3234 3154 258 254 0 0 chr10 2234280 2234347 -143354941 + (TG)n Simple_repeat Simple_repeat 2 68 0 1638 177 0 38 chr10 2234584 2234901 -143354387 + AluJo SINE Alu 1 305 -7 23 33 0 0 chr10 2234967 2234997 -143354291 + AT_rich Low_complexity Low_complexity 1 30 0 23 33 0 0 chr10 2235965 2235995 -143353293 + AT_rich Low_complexity Low_complexity 1 30 0 7852 13 7 0 chr10 2238201 2239222 -143350066 - L1PA2 LINE L1 0 6155 5133 5001 191 31 20 chr10 2241895 2243476 -143345812 + L1MC1 LINE L1 4732 6333 0 340 216 0 0 chr10 2243491 2243565 -143345723 + AluJ/FRAM SINE Alu 228 301 -1 27 0 0 0 chr10 2244338 2244365 -143344923 + AT_rich Low_complexity Low_complexity 1 27 0 22 35 0 0 chr10 2244404 2244433 -143344855 + AT_rich Low_complexity Low_complexity 1 29 0 24 53 0 0 chr10 2244701 2244739 -143344549 + AT_rich Low_complexity Low_complexity 1 38 0 381 307 135 5 chr10 2245566 2245781 -143343507 + MLT1J1 LTR MaLR 202 444 -2 290 314 44 7 chr10 2246246 2246383 -143342905 + MLT1J2 LTR MaLR 47 188 -262 26 30 0 0 chr10 2246597 2246630 -143342658 + AT_rich Low_complexity Low_complexity 1 33 0 1947 104 11 31 chr10 2246930 2247217 -143342071 - AluSg SINE Alu -3 307 27 280 179 0 0 chr10 2247306 2247362 -143341926 - MER4-int LTR ERV1 -5431 1167 1112 212 196 62 21 chr10 2247365 2247462 -143341826 + (CATG)n Simple_repeat Simple_repeat 3 103 0 * 354 297 0 0 chr10 2247442 2247587 -143341701 + (CA)n Simple_repeat Simple_repeat 1 145 0 398 286 183 43 chr10 2248928 2249463 -143339825 + L2 LINE L2 2366 2975 -339 189 333 10 62 chr10 2249681 2249777 -143339511 + L2 LINE L2 3142 3232 -40 898 246 36 70 chr10 2250527 2250884 -143338404 - MLT1A2 LTR MaLR 0 374 30 21 0 0 0 chr10 2251102 2251123 -143338165 + AT_rich Low_complexity Low_complexity 1 21 0 361 168 77 0 chr10 2251264 2251419 -143337869 + (TA)n Simple_repeat Simple_repeat 2 168 0 299 333 33 39 chr10 2251976 2252312 -143336976 + L1ME4a LINE L1 5540 5873 -248 2164 144 44 47 chr10 2252644 2253027 -143336261 + MER83 LTR ERV1 1 382 -66 26 0 0 0 chr10 2253027 2253053 -143336235 + AT_rich Low_complexity Low_complexity 1 26 0 1207 211 20 56 chr10 2253237 2253592 -143335696 - MLT1A1 LTR MaLR 0 365 24 752 208 119 36 chr10 2254558 2254752 -143334536 - L1MDb LINE L1 -5342 1201 972 2335 113 52 19 chr10 2254752 2255115 -143334173 + THE1C LTR MaLR 1 375 0 752 208 119 36 chr10 2255115 2255223 -143334065 - L1MDb LINE L1 -5571 972 874 327 286 112 29 chr10 2255431 2255637 -143333651 - L1MDb LINE L1 -6146 394 172 1114 58 0 0 chr10 2255677 2255814 -143333474 + AluY SINE Alu 172 308 -3 26 30 0 0 chr10 2256531 2256564 -143332724 + AT_rich Low_complexity Low_complexity 1 33 0 251 306 8 40 chr10 2256617 2256741 -143332547 - L1MEc LINE L1 -4646 1750 1631 197 194 0 15 chr10 2257729 2257796 -143331492 + GA-rich Low_complexity Low_complexity 1 66 0 671 132 14 14 chr10 2257834 2257978 -143331310 + GA-rich Low_complexity Low_complexity 4 147 0 358 362 6 17 chr10 2258037 2258214 -143331074 - MER5B DNA MER1_type 0 178 4 334 234 215 24 chr10 2258241 2258446 -143330842 - L2 LINE L2 -534 2780 2537 1335 249 22 11 chr10 2258483 2258848 -143330440 + MLT1A2 LTR MaLR 6 374 0 325 264 141 25 chr10 2258855 2259018 -143330270 - L2 LINE L2 -803 2511 2330 551 96 0 48 chr10 2260304 2260336 -143328952 + MADE1 DNA Mariner 2 34 -46 2381 78 0 44 chr10 2260336 2260656 -143328632 - AluY SINE Alu -5 306 1 551 96 0 48 chr10 2260656 2260706 -143328582 + MADE1 DNA Mariner 34 80 0 213 354 50 43 chr10 2260852 2261013 -143328275 + MIR SINE MIR 76 237 -25 2420 103 0 0 chr10 2262442 2262754 -143326534 - AluSx SINE Alu 0 312 1 327 287 21 64 chr10 2264357 2264545 -143324743 + L2 LINE L2 3031 3210 -103 2844 77 31 0 chr10 2265263 2265615 -143323673 + THE1B LTR MaLR 1 363 -1 627 235 92 0 chr10 2267755 2267908 -143321380 + MER5A DNA MER1_type 4 170 -19 186 43 0 0 chr10 2268560 2268583 -143320705 + (TTC)n Simple_repeat Simple_repeat 2 24 0 905 200 0 6 chr10 2269242 2269417 -143319871 + AluJb SINE Alu 137 310 -2 22 35 0 0 chr10 2271034 2271063 -143318225 + AT_rich Low_complexity Low_complexity 1 29 0 4168 185 39 22 chr10 2271070 2271870 -143317418 - L1MA6 LINE L1 -1 6299 5483 2041 125 3 29 chr10 2271870 2272183 -143317105 - AluSx SINE Alu -7 305 1 4168 185 39 22 chr10 2272183 2272231 -143317057 - L1MA6 LINE L1 -817 5483 5437 2305 137 91 10 chr10 2272377 2272771 -143316517 - MSTB LTR MaLR 0 426 1 256 0 0 71 chr10 2275299 2275341 -143313947 + (TTTTTA)n Simple_repeat Simple_repeat 2 40 0 2055 140 156 11 chr10 2275352 2275724 -143313564 + MSTA LTR MaLR 2 427 -1 1533 195 7 0 chr10 2275724 2276001 -143313287 - AluJb SINE Alu -33 279 1 320 69 379 0 chr10 2276010 2276068 -143313220 + MADE1 DNA Mariner 1 80 0 22 0 0 0 chr10 2276699 2276721 -143312567 + AT_rich Low_complexity Low_complexity 1 22 0 924 252 133 44 chr10 2276778 2277370 -143311918 + MER114 LTR ERV 1 645 -3 1595 216 54 43 chr10 2277540 2277984 -143311304 - MSTB2 LTR MaLR -2 455 7 1295 224 108 30 chr10 2278279 2278614 -143310674 - MLT1A2 LTR MaLR -13 361 1 387 330 45 6 chr10 2279675 2279851 -143309437 + L2 LINE L2 2229 2411 -903 484 210 31 6 chr10 2279915 2280077 -143309211 + CT-rich Low_complexity Low_complexity 2 167 0 518 304 136 50 chr10 2280148 2280797 -143308491 + L2 LINE L2 2587 3285 -28 1152 196 31 13 chr10 2281298 2281522 -143307766 - MLT1A1 LTR MaLR -2 363 136 426 205 0 0 chr10 2281531 2281614 -143307674 - MLT1A1 LTR MaLR -171 194 112 1010 177 15 35 chr10 2281620 2281818 -143307470 - MLT1A1 LTR MaLR -171 194 1 1293 236 54 0 chr10 2281835 2282186 -143307102 - L1MC3 LINE L1 0 7785 7416 * 3879 247 74 43 chr10 2282183 2282906 -143306382 - L1MC3 LINE L1 -759 5387 4687 1551 184 33 23 chr10 2282906 2283205 -143306083 - AluJb SINE Alu -10 302 1 3879 247 74 43 chr10 2283205 2285342 -143303946 - L1MC3 LINE L1 -1459 4687 3729 1336 220 34 54 chr10 2285344 2285822 -143303466 + L1ME1 LINE L1 2752 3219 -2927 22 0 0 0 chr10 2287023 2287045 -143302243 + AT_rich Low_complexity Low_complexity 1 22 0 216 336 14 41 chr10 2287093 2287178 -143302110 + MIR SINE MIR 111 192 -70 2161 125 7 0 chr10 2287178 2287474 -143301814 + AluSx SINE Alu 1 298 -14 216 336 14 41 chr10 2287474 2287534 -143301754 + MIR SINE MIR 192 252 -10 2087 273 41 19 chr10 2287893 2288622 -143300666 + L1ME1 LINE L1 5418 6162 -4 1817 168 21 71 chr10 2289099 2289481 -143299807 - THE1B LTR MaLR -1 363 1 208 219 78 16 chr10 2289554 2289618 -143299670 - L3 LINE CR1 -1304 273 206 186 337 61 18 chr10 2289659 2289822 -143299466 - MIR SINE MIR -70 192 23 228 200 0 0 chr10 2290707 2290777 -143298511 + (TA)n Simple_repeat Simple_repeat 1 70 0 355 254 58 96 chr10 2292373 2292561 -143296727 - L1ME3 LINE L1 0 6170 5983 2301 101 10 0 chr10 2292561 2292867 -143296421 - AluSx SINE Alu -3 309 1 355 254 58 96 chr10 2292867 2292982 -143296306 - L1ME3 LINE L1 -187 5983 5865 252 168 69 46 chr10 2293150 2293323 -143295965 + (CACTT)n Simple_repeat Simple_repeat 4 180 0 22 0 0 0 chr10 2294281 2294303 -143294985 + AT_rich Low_complexity Low_complexity 1 22 0 2090 128 3 7 chr10 2295012 2295310 -143293978 - AluSx SINE Alu -2 310 14 1250 183 57 103 chr10 2295895 2296196 -143293092 - AluJb SINE Alu -14 288 2 21 0 0 0 chr10 2296314 2296335 -143292953 + AT_rich Low_complexity Low_complexity 1 21 0 722 188 33 13 chr10 2296689 2296859 -143292429 - MLT1A1 LTR MaLR -4 405 215 225 346 77 10 chr10 2297033 2297137 -143292151 - L2 LINE L2 0 3272 3162 190 301 124 42 chr10 2298309 2298690 -143290598 - L2 LINE L2 -15 3298 2837 1077 229 47 28 chr10 2298690 2299053 -143290235 + MLT1A2 LTR MaLR 1 370 -4 190 301 124 42 chr10 2299053 2299090 -143290198 - L2 LINE L2 -476 2837 2804 286 224 142 30 chr10 2299226 2299360 -143289928 - L2 LINE L2 -513 2801 2653 1910 139 30 3 chr10 2299421 2299716 -143289572 + AluSx SINE Alu 1 303 -9 683 250 51 21 chr10 2299720 2299985 -143289303 - MER58 DNA MER1_type -36 2384 18 800 363 148 9 chr10 2300005 2300843 -143288445 - L2 LINE L2 -645 2669 1716 2029 221 0 3 chr10 2301094 2301471 -143287817 + MER44D DNA MER2_type 9 439 -166 1218 218 29 39 chr10 2301471 2301778 -143287510 - MLT2B3 LTR ERVL 0 554 251 837 214 0 6 chr10 2301895 2302063 -143287225 + MER44D DNA MER2_type 439 605 0 5530 174 26 17 chr10 2302492 2303192 -143286096 - L1MC1 LINE L1 -5 6328 5610 2007 212 15 5 chr10 2303192 2303583 -143285705 - MSTD LTR MaLR 0 396 2 5530 174 26 17 chr10 2303583 2303991 -143285297 - L1MC1 LINE L1 -723 5610 5207 914 153 10 89 chr10 2303991 2304194 -143285094 - AluJb SINE Alu -5 307 121 652 200 205 0 chr10 2304659 2304854 -143284434 + MER46A DNA MER2_type 2 236 0 27 49 0 0 chr10 2305280 2305321 -143283967 + AT_rich Low_complexity Low_complexity 1 41 0 212 0 36 0 chr10 2307718 2307746 -143281542 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 315 379 15 15 chr10 2308012 2308281 -143281007 + ERVL LTR ERVL 3236 3504 -2260 1392 301 52 7 chr10 2309750 2310344 -143278944 + L1M4 LINE L1 4142 4762 -1384 764 206 12 0 chr10 2310346 2310516 -143278772 - L1MC1 LINE L1 -1248 4898 4727 1223 207 48 42 chr10 2310533 2310910 -143278378 + MLT1D LTR MaLR 21 399 -106 728 201 49 0 chr10 2310912 2311056 -143278232 - L1MB1 LINE L1 -1 6167 6017 1955 53 0 0 chr10 2311104 2311332 -143277956 - L1PA5 LINE L1 0 6154 5927 989 138 20 31 chr10 2311342 2311537 -143277751 + L1MA4 LINE L1 6108 6300 0 239 311 118 7 chr10 2311582 2311717 -143277571 + MIR SINE MIR 110 259 -3 222 164 49 16 chr10 2311729 2311790 -143277498 + (TTATG)n Simple_repeat Simple_repeat 3 65 0 285 344 0 0 chr10 2312312 2312405 -143276883 + MIR SINE MIR 52 144 -64 855 161 0 60 chr10 2312485 2312684 -143276604 - L1MA4 LINE L1 -6 6294 6108 704 196 42 0 chr10 2312738 2312881 -143276407 + L1MB1 LINE L1 6019 6167 -1 24 0 0 0 chr10 2313090 2313114 -143276174 + AT_rich Low_complexity Low_complexity 1 24 0 2119 190 33 13 chr10 2313857 2314251 -143275037 - MER57A LTR ERV1 -1 402 1 1297 185 30 26 chr10 2314866 2315039 -143274249 - AluJo SINE Alu -9 303 127 185 83 28 0 chr10 2315039 2315075 -143274213 + (TTTA)n Simple_repeat Simple_repeat 3 39 0 1297 185 30 26 chr10 2315075 2315203 -143274085 - AluJo SINE Alu -185 127 1 2795 178 20 79 chr10 2316378 2317026 -143272262 + LTR9 LTR ERV1 3 612 0 2037 119 1 48 chr10 2317284 2317818 -143271470 - MER4A LTR ERV1 0 664 1 3610 163 16 21 chr10 2318818 2319558 -143269730 + LTR1B LTR ERV1 1 826 0 30 45 0 0 chr10 2321039 2321083 -143268205 + AT_rich Low_complexity Low_complexity 1 44 0 2403 74 3 7 chr10 2321593 2321903 -143267385 - AluY SINE Alu -2 309 1 1919 136 0 3 chr10 2322915 2323202 -143266086 + AluSx SINE Alu 23 308 -4 21 57 0 0 chr10 2323275 2323310 -143265978 + AT_rich Low_complexity Low_complexity 1 35 0 663 223 54 45 chr10 2324467 2324709 -143264579 + LTR40a LTR ERVL 212 512 -7 592 255 74 10 chr10 2325931 2326176 -143263112 - MIR SINE MIR 0 262 3 21 0 0 0 chr10 2326827 2326848 -143262440 + AT_rich Low_complexity Low_complexity 1 21 0 2230 108 0 0 chr10 2328525 2328813 -143260475 - AluSx SINE Alu -24 288 1 207 257 239 0 chr10 2328871 2328980 -143260308 - MIR SINE MIR -46 216 82 203 367 73 0 chr10 2329303 2329412 -143259876 - MIR SINE MIR -111 151 35 22 109 0 0 chr10 2330125 2330217 -143259071 + AT_rich Low_complexity Low_complexity 1 92 0 715 261 30 0 chr10 2330372 2330571 -143258717 - L1MC3 LINE L1 -21 7764 7560 3779 160 34 9 chr10 2330582 2331256 -143258032 + MER50 LTR ERV1 12 702 -32 2249 243 57 16 chr10 2331266 2331953 -143257335 - L1MC3 LINE L1 -221 7564 6850 317 222 10 0 chr10 2332002 2332101 -143257187 + (TG)n Simple_repeat Simple_repeat 1 100 0 1680 231 110 27 chr10 2332101 2332664 -143256624 - L1MC3 LINE L1 -928 6857 6248 3570 113 21 25 chr10 2333441 2333999 -143255289 + MER4B LTR ERV1 1 556 -54 286 77 0 0 chr10 2333995 2334034 -143255254 + Alu SINE Alu 13 51 -252 * 486 211 0 46 chr10 2334048 2334157 -143255131 - LTR62 LTR ERVK -610 109 6 1434 215 95 50 chr10 2334825 2335290 -143253998 - MER66B LTR ERV1 0 486 1 1512 130 65 0 chr10 2335784 2336000 -143253288 - MER30 DNA MER1_type 0 230 1 23 33 0 0 chr10 2337480 2337510 -143251778 + AT_rich Low_complexity Low_complexity 1 30 0 236 321 131 0 chr10 2337518 2337655 -143251633 + L1M4 LINE L1 3731 3885 -2261 252 0 0 0 chr10 2338010 2338038 -143251250 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 433 244 0 0 chr10 2338316 2338402 -143250886 - U6 snRNA snRNA -19 88 3 606 239 100 13 chr10 2338404 2338634 -143250654 + MLT2D LTR ERVL 100 349 -65 575 138 54 6 chr10 2338648 2338815 -143250473 + (TCTA)n Simple_repeat Simple_repeat 1 175 0 376 163 72 0 chr10 2338882 2339048 -143250240 + (TCTA)n Simple_repeat Simple_repeat 1 178 0 509 123 71 0 chr10 2339092 2339247 -143250041 + (TCTA)n Simple_repeat Simple_repeat 1 166 0 633 121 55 0 chr10 2339317 2339482 -143249806 + (TCTA)n Simple_repeat Simple_repeat 1 174 0 2125 135 0 0 chr10 2340341 2340652 -143248636 + AluSx SINE Alu 1 311 -1 1298 247 34 29 chr10 2340689 2341069 -143248219 - MLT1B LTR MaLR -8 382 1 362 285 125 0 chr10 2342133 2342277 -143247011 + LTR16C LTR ERVL 88 249 -242 323 259 74 53 chr10 2342282 2342471 -143246817 + L1ME3A LINE L1 5965 6157 -13 21 0 0 0 chr10 2342472 2342493 -143246795 + AT_rich Low_complexity Low_complexity 1 21 0 2804 115 0 0 chr10 2343409 2343773 -143245515 - THE1B LTR MaLR 0 364 1 25 0 0 0 chr10 2344006 2344031 -143245257 + AT_rich Low_complexity Low_complexity 1 25 0 2105 127 7 0 chr10 2345162 2345462 -143243826 - AluSx SINE Alu -10 302 1 2374 79 0 3 chr10 2346285 2346590 -143242698 - AluY SINE Alu -7 304 1 226 163 0 20 chr10 2346754 2346803 -143242485 + A-rich Low_complexity Low_complexity 1 48 0 22 0 0 0 chr10 2347510 2347532 -143241756 + AT_rich Low_complexity Low_complexity 1 22 0 2136 136 101 20 chr10 2347747 2348143 -143241145 + MSTA LTR MaLR 1 428 0 441 281 60 27 chr10 2348606 2348909 -143240379 - MLT1I LTR MaLR -27 382 76 232 171 57 0 chr10 2348978 2349048 -143240240 + C-rich Low_complexity Low_complexity 3 76 0 23 0 0 0 chr10 2350655 2350678 -143238610 + AT_rich Low_complexity Low_complexity 1 23 0 273 75 0 0 chr10 2350811 2350851 -143238437 + (TG)n Simple_repeat Simple_repeat 1 40 0 453 289 102 49 chr10 2350950 2351121 -143238167 - HAL1b LINE L1 -224 1124 964 1577 199 13 13 chr10 2351121 2351432 -143237856 + AluJb SINE Alu 1 311 -1 453 289 102 49 chr10 2351432 2351934 -143237354 - HAL1b LINE L1 -384 964 415 1394 45 0 6 chr10 2352034 2352213 -143237075 + (GAA)n Simple_repeat Simple_repeat 2 179 0 1427 190 16 57 chr10 2352213 2352581 -143236707 - MLT1B LTR MaLR -37 353 1 204 236 34 34 chr10 2353093 2353182 -143236106 + T-rich Low_complexity Low_complexity 2 90 0 22 35 0 0 chr10 2353722 2353751 -143235537 + AT_rich Low_complexity Low_complexity 1 29 0 198 71 0 0 chr10 2354525 2354553 -143234735 + (CA)n Simple_repeat Simple_repeat 2 29 0 244 247 82 103 chr10 2354786 2355078 -143234210 - MLT1H LTR MaLR -214 335 50 1817 194 26 11 chr10 2356974 2357356 -143231932 + MLT1B LTR MaLR 3 390 0 815 137 0 23 chr10 2357499 2357630 -143231658 + FLAM_C SINE Alu 5 132 -11 188 275 110 28 chr10 2358621 2358730 -143230558 - MIR SINE MIR 0 262 145 308 333 111 28 chr10 2358741 2358993 -143230295 - HAL1 LINE L1 -1003 1504 1232 692 220 0 0 chr10 2361762 2361903 -143227385 + FLAM_C SINE Alu 3 143 0 1624 40 0 0 chr10 2361985 2362183 -143227105 + L1PA2 LINE L1 5958 6155 0 279 0 0 0 chr10 2362434 2362465 -143226823 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 189 0 0 0 chr10 2362816 2362837 -143226451 + (TTAA)n Simple_repeat Simple_repeat 4 24 0 1231 118 0 0 chr10 2363461 2363630 -143225658 + AluSg/x SINE Alu 131 299 -13 307 341 142 37 chr10 2363952 2364275 -143225013 + HAL1 LINE L1 1414 1770 -737 2421 81 0 3 chr10 2364960 2365268 -143224020 + AluY SINE Alu 1 307 -4 1479 291 97 15 chr10 2365509 2366357 -143222931 + L1M4b LINE L1 44 960 -5899 419 250 23 0 chr10 2366351 2366483 -143222805 - L1M4 LINE L1 -4853 1689 1555 * 228 185 0 19 chr10 2366503 2366557 -143222731 + (TA)n Simple_repeat Simple_repeat 2 54 0 482 97 97 0 chr10 2368146 2368239 -143221049 + L1MA4A LINE L1 6197 6298 -5 2091 99 0 3 chr10 2368492 2368822 -143220466 + AluY SINE Alu 1 329 0 185 340 10 30 chr10 2368822 2368922 -143220366 - MIR SINE MIR -1 261 164 22 0 0 0 chr10 2368934 2368956 -143220332 + AT_rich Low_complexity Low_complexity 1 22 0 291 204 44 26 chr10 2369374 2369487 -143219801 + L1M4 LINE L1 4324 4438 -1708 1965 147 10 6 chr10 2369704 2370016 -143219272 - AluSq SINE Alu 0 313 1 609 266 83 63 chr10 2370018 2370367 -143218921 - L1MEc LINE L1 -4183 2213 1858 186 43 0 0 chr10 2370544 2370567 -143218721 + (CTTG)n Simple_repeat Simple_repeat 1 23 0 1100 191 0 59 chr10 2370675 2370911 -143218377 - AluJb SINE Alu 0 312 91 2188 131 48 14 chr10 2370986 2371338 -143217950 + THE1B LTR MaLR 1 364 0 9992 110 20 18 chr10 2371338 2372907 -143216381 + THE1B-int LTR MaLR 1 1572 -8 2163 124 48 28 chr10 2372914 2373269 -143216019 + THE1B LTR MaLR 1 362 -2 213 154 0 0 chr10 2373330 2373369 -143215919 + CT-rich Low_complexity Low_complexity 2 40 0 23 54 0 0 chr10 2373403 2373440 -143215848 + AT_rich Low_complexity Low_complexity 1 37 0 24 0 0 0 chr10 2373500 2373524 -143215764 + AT_rich Low_complexity Low_complexity 1 24 0 1863 148 33 7 chr10 2373793 2374096 -143215192 - AluSx SINE Alu -1 311 1 239 273 15 0 chr10 2374230 2374296 -143214992 + LTR50 LTR ERVL 403 469 -326 25 31 0 0 chr10 2374673 2374705 -143214583 + AT_rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr10 2374760 2374783 -143214505 + AT_rich Low_complexity Low_complexity 1 23 0 219 36 0 0 chr10 2374806 2374834 -143214454 + (TTA)n Simple_repeat Simple_repeat 2 29 0 206 105 26 0 chr10 2375137 2375175 -143214113 + (CA)n Simple_repeat Simple_repeat 2 40 0 24 32 0 0 chr10 2375562 2375593 -143213695 + AT_rich Low_complexity Low_complexity 1 31 0 1928 160 3 6 chr10 2375772 2376084 -143213204 - AluSx SINE Alu -1 311 1 255 147 0 73 chr10 2377827 2377895 -143211393 + (TTTA)n Simple_repeat Simple_repeat 2 64 0 184 299 62 31 chr10 2378417 2378514 -143210774 - MIR SINE MIR -85 177 78 264 352 16 16 chr10 2378777 2378905 -143210383 - MIR SINE MIR -118 144 17 1749 163 36 28 chr10 2379028 2379500 -143209788 - MLT2A2 LTR ERVL -81 461 1 955 222 55 37 chr10 2379794 2380174 -143209114 - L1MA9 LINE L1 -25 6266 5859 190 54 27 27 chr10 2380202 2380239 -143209049 + (TAA)n Simple_repeat Simple_repeat 3 39 0 474 248 0 0 chr10 2380241 2380354 -143208934 + L1M2 LINE L1 5681 5793 -519 225 182 15 30 chr10 2380847 2380913 -143208375 - Charlie5 DNA MER1_type -129 2483 2419 1434 94 0 0 chr10 2380918 2381110 -143208178 + L1PA7 LINE L1 5950 6141 -13 232 241 0 0 chr10 2384486 2384540 -143204748 - MIR SINE MIR -26 236 183 994 270 59 28 chr10 2385077 2385430 -143203858 - L1MB2 LINE L1 -38 6133 5768 675 306 65 7 chr10 2385458 2385733 -143203555 - L2 LINE L2 -1005 2309 2019 225 0 100 0 chr10 2388527 2388567 -143200721 + T-rich Low_complexity Low_complexity 2 45 0 21 57 0 0 chr10 2388862 2388897 -143200391 + AT_rich Low_complexity Low_complexity 1 35 0 258 259 86 25 chr10 2389616 2389778 -143199510 - L1MB2 LINE L1 -1501 4645 4474 201 133 0 0 chr10 2389903 2389933 -143199355 + (TC)n Simple_repeat Simple_repeat 1 30 0 2043 81 11 0 chr10 2390464 2390725 -143198563 + AluSq SINE Alu 1 264 -49 352 257 71 0 chr10 2391030 2391170 -143198118 - L1MB2 LINE L1 -2222 3924 3775 434 261 62 26 chr10 2391870 2392065 -143197223 + MER3 DNA MER1_type 1 202 -7 22 0 0 0 chr10 2392254 2392276 -143197012 + AT_rich Low_complexity Low_complexity 1 22 0 2332 106 3 0 chr10 2394224 2394526 -143194762 + AluSx SINE Alu 1 303 -9 21 36 0 0 chr10 2397108 2397136 -143192152 + AT_rich Low_complexity Low_complexity 1 28 0 902 186 0 0 chr10 2397170 2397331 -143191957 + MER2 DNA MER2_type 3 163 -182 268 74 0 37 chr10 2399049 2399066 -143190222 + (TA)n Simple_repeat Simple_repeat 1 17 -35 189 0 0 0 chr10 2399066 2399087 -143190201 + (GA)n Simple_repeat Simple_repeat 2 22 0 268 74 0 37 chr10 2399087 2399123 -143190165 + (TA)n Simple_repeat Simple_repeat 17 52 0 365 202 0 64 chr10 2399161 2399255 -143190033 + L1MC4 LINE L1 6616 6703 -1339 243 0 0 0 chr10 2399263 2399290 -143189998 + (GA)n Simple_repeat Simple_repeat 2 28 0 240 100 0 0 chr10 2399347 2399387 -143189901 + (TA)n Simple_repeat Simple_repeat 1 40 0 256 307 20 0 chr10 2399619 2399720 -143189568 + L1ME LINE L1 5735 5837 -333 508 103 0 13 chr10 2399768 2399846 -143189442 + MADE1 DNA Mariner 4 80 0 378 0 0 0 chr10 2399847 2399889 -143189399 + (TAGA)n Simple_repeat Simple_repeat 4 45 0 314 239 9 0 chr10 2400523 2400632 -143188656 + (TA)n Simple_repeat Simple_repeat 1 110 0 400 333 16 58 chr10 2400697 2400980 -143188308 - L1MEd LINE L1 -4992 1078 784 305 277 27 54 chr10 2401422 2401534 -143187754 - L1MEd LINE L1 -5887 183 75 2487 81 7 0 chr10 2402112 2402420 -143186868 + AluY SINE Alu 2 311 0 302 313 21 0 chr10 2403750 2403846 -143185442 + L1ME LINE L1 5735 5832 -338 313 261 0 43 chr10 2403875 2404063 -143185225 + (TA)n Simple_repeat Simple_repeat 1 180 0 267 156 0 0 chr10 2404078 2404123 -143185165 - MSTA LTR MaLR -383 45 1 240 318 0 0 chr10 2404395 2404458 -143184830 + L2 LINE L2 2729 2791 -523 1399 165 81 0 chr10 2405345 2405581 -143183707 + AluJb SINE Alu 40 294 -18 2785 19 0 6 chr10 2405716 2406027 -143183261 + AluY SINE Alu 1 309 -2 1126 268 79 63 chr10 2407342 2408005 -143181283 - L1ME1 LINE L1 -3 6232 5524 2022 95 15 0 chr10 2408005 2408278 -143181010 - AluSp SINE Alu -35 278 2 1126 268 79 63 chr10 2408278 2408762 -143180526 - L1ME1 LINE L1 -711 5524 5049 979 316 57 35 chr10 2408793 2409380 -143179908 - L1ME1 LINE L1 -5415 981 365 1432 157 70 76 chr10 2409380 2409724 -143179564 + MER61A LTR ERV1 1 342 -1 979 316 57 35 chr10 2409724 2410054 -143179234 - L1ME1 LINE L1 -6031 365 44 30 0 0 0 chr10 2410602 2410632 -143178656 + AT_rich Low_complexity Low_complexity 1 30 0 192 111 0 0 chr10 2410659 2410695 -143178593 + (A)n Simple_repeat Simple_repeat 1 36 0 1227 179 10 5 chr10 2410964 2411171 -143178117 + AluJb SINE Alu 59 266 -46 186 209 0 0 chr10 2412294 2412337 -143176951 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 500 278 67 0 chr10 2412970 2413164 -143176124 - MER20 DNA MER1_type -7 212 6 447 19 0 0 chr10 2413506 2413558 -143175730 + (CA)n Simple_repeat Simple_repeat 2 53 0 446 170 0 10 chr10 2414760 2414860 -143174428 + (CA)n Simple_repeat Simple_repeat 2 100 0 290 243 100 67 chr10 2415065 2415237 -143174051 + L1MA9 LINE L1 6058 6240 -72 204 40 0 0 chr10 2415237 2415262 -143174026 + (TA)n Simple_repeat Simple_repeat 1 25 0 290 243 100 67 chr10 2415262 2415299 -143173989 + L1MA9 LINE L1 6240 6274 -38 216 0 0 0 chr10 2417242 2417266 -143172022 + (T)n Simple_repeat Simple_repeat 1 24 0 200 293 0 27 chr10 2418707 2418782 -143170506 + (CATATA)n Simple_repeat Simple_repeat 3 75 0 323 322 91 34 chr10 2419210 2419474 -143169814 - L1M4 LINE L1 -1377 4769 4491 199 349 24 0 chr10 2419650 2419733 -143169555 - MIR SINE MIR -103 105 21 321 287 83 26 chr10 2420185 2420415 -143168873 - LTR43 LTR ERV1 -167 435 193 249 218 0 68 chr10 2423672 2423819 -143165469 + (TGG)n Simple_repeat Simple_repeat 2 138 0 365 145 0 58 chr10 2423831 2424003 -143165285 + (TGG)n Simple_repeat Simple_repeat 2 163 0 377 275 41 35 chr10 2425698 2425869 -143163419 + MIR SINE MIR 81 252 -10 21 36 0 0 chr10 2426280 2426308 -143162980 + AT_rich Low_complexity Low_complexity 1 28 0 414 302 122 12 chr10 2426754 2426999 -143162289 + MER69 DNA AcHobo 25 296 -2230 988 266 128 38 chr10 2427156 2427821 -143161467 - MER50 LTR ERV1 0 734 10 581 265 160 19 chr10 2428008 2428427 -143160861 + MER69 DNA AcHobo 2049 2526 0 712 228 106 5 chr10 2428490 2428679 -143160609 + MER58A DNA MER1_type 2 209 -15 25 31 0 0 chr10 2429257 2429289 -143159999 + AT_rich Low_complexity Low_complexity 1 32 0 3563 84 18 2 chr10 2430487 2430987 -143158301 - MER41A LTR ERV1 -46 508 1 2201 127 0 6 chr10 2431778 2432093 -143157195 + AluSq SINE Alu 1 313 0 380 250 0 46 chr10 2432449 2432557 -143156731 - MIR SINE MIR 0 262 160 2384 134 10 63 chr10 2432562 2433041 -143156247 + MER4D LTR ERV1 1 454 -418 1170 54 0 0 chr10 2433051 2433198 -143156090 - L1PA4 LINE L1 -3 6152 6006 1824 163 3 3 chr10 2433645 2433966 -143155322 - AluSx SINE Alu 0 312 1 2527 128 49 2 chr10 2434117 2434525 -143154763 - MSTA LTR MaLR -1 427 1 1054 249 92 12 chr10 2435256 2435682 -143153606 - MLT1C LTR MaLR -7 460 1 1292 213 66 3 chr10 2436248 2436568 -143152720 + MLT1B LTR MaLR 7 346 -44 325 217 0 0 chr10 2436572 2436641 -143152647 + MLT1B LTR MaLR 315 383 -7 629 155 17 17 chr10 2436919 2437035 -143152253 + FLAM_C SINE Alu 1 116 -17 207 0 0 0 chr10 2437051 2437074 -143152214 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 459 0 0 0 chr10 2437076 2437127 -143152161 + (TA)n Simple_repeat Simple_repeat 1 51 0 211 244 0 0 chr10 2437130 2437171 -143152117 + MIR SINE MIR 113 153 -109 852 140 110 0 chr10 2437836 2438038 -143151250 - AluSg/x SINE Alu 0 347 131 352 259 28 61 chr10 2439749 2439961 -143149327 + MER46C DNA MER2_type 1 205 -133 693 133 18 0 chr10 2440088 2440201 -143149087 + AluSg/x SINE Alu 192 306 -6 449 182 10 0 chr10 2440349 2440448 -143148840 + (CATATA)n Simple_repeat Simple_repeat 6 105 0 344 276 23 0 chr10 2440448 2440535 -143148753 + L1MC4 LINE L1 6614 6702 -1340 207 182 0 0 chr10 2440536 2440569 -143148719 + (CATATA)n Simple_repeat Simple_repeat 6 38 0 1137 128 0 0 chr10 2440569 2440749 -143148539 + (TA)n Simple_repeat Simple_repeat 1 180 0 31 99 0 0 chr10 2440890 2440991 -143148297 + AT_rich Low_complexity Low_complexity 1 101 0 843 290 153 17 chr10 2441349 2442121 -143147167 + L1ME3A LINE L1 5294 6170 0 763 308 47 18 chr10 2446075 2446527 -143142761 - L1ME3A LINE L1 -214 6374 5910 503 283 72 33 chr10 2446771 2447075 -143142213 - L1ME3A LINE L1 -913 5651 5336 1567 270 21 22 chr10 2447176 2447806 -143141482 + L1MC/D LINE L1 4024 4652 -1494 1403 164 9 4 chr10 2447814 2448045 -143141243 - AluSg/x SINE Alu -10 300 69 980 187 108 0 chr10 2448053 2448287 -143141001 - L1MA4A LINE L1 -134 6169 5912 * 2081 221 43 37 chr10 2448268 2449384 -143139904 + L1MC/D LINE L1 4645 5773 -571 1027 277 52 13 chr10 2449384 2449843 -143139445 - L1ME3A LINE L1 -3058 3506 3030 421 256 62 43 chr10 2449856 2450052 -143139236 - L1MCa LINE L1 -5882 343 17 367 255 168 0 chr10 2450135 2450296 -143138992 - L1MCa LINE L1 -3965 2461 2274 835 171 0 11 chr10 2450486 2450661 -143138627 + GA-rich Low_complexity Low_complexity 4 176 0 1537 231 66 52 chr10 2450970 2451572 -143137716 + L1MC4 LINE L1 7426 8036 -6 270 0 0 0 chr10 2451969 2451999 -143137289 + (T)n Simple_repeat Simple_repeat 1 30 0 317 193 114 57 chr10 2452846 2452934 -143136354 + MIR SINE MIR 20 112 -150 23 68 0 0 chr10 2452984 2453028 -143136260 + AT_rich Low_complexity Low_complexity 1 44 0 2741 23 0 0 chr10 2453952 2454260 -143135028 - AluYa5 SINE Alu -3 308 1 407 280 47 62 chr10 2454289 2454564 -143134724 + L1M4 LINE L1 4341 4611 -1535 342 67 0 0 chr10 2456126 2456171 -143133117 + (TG)n Simple_repeat Simple_repeat 2 46 0 257 175 10 52 chr10 2456561 2456658 -143132630 + (TATATG)n Simple_repeat Simple_repeat 2 94 0 315 248 44 83 chr10 2456975 2457110 -143132178 + MLT2C1 LTR ERVL 269 334 -63 2208 92 3 35 chr10 2457110 2457426 -143131862 - AluSx SINE Alu -6 306 1 315 248 44 83 chr10 2457426 2457488 -143131800 + MLT2C1 LTR ERVL 334 397 0 2224 123 0 0 chr10 2458076 2458386 -143130902 + AluSg SINE Alu 1 310 0 195 100 0 0 chr10 2458419 2458449 -143130839 + (CAAAA)n Simple_repeat Simple_repeat 3 32 0 204 346 88 11 chr10 2459078 2459260 -143130028 + L2 LINE L2 2196 2391 -923 214 337 45 0 chr10 2459579 2459668 -143129620 + MIR3 SINE MIR 96 188 -20 21 0 0 0 chr10 2460265 2460286 -143129002 + AT_rich Low_complexity Low_complexity 1 21 0 203 167 0 28 chr10 2460332 2460404 -143128884 + (TTATA)n Simple_repeat Simple_repeat 5 74 0 288 238 46 13 chr10 2460407 2460558 -143128730 + (TA)n Simple_repeat Simple_repeat 2 157 0 2070 99 7 7 chr10 2460687 2460969 -143128319 + AluSx SINE Alu 3 284 -28 1065 201 36 12 chr10 2461417 2461666 -143127622 - L1MB1 LINE L1 0 6168 5914 26 0 0 0 chr10 2464634 2464660 -143124628 + AT_rich Low_complexity Low_complexity 1 26 0 1493 161 8 0 chr10 2465718 2465954 -143123334 + AluJo SINE Alu 35 272 -40 207 0 0 0 chr10 2465970 2465993 -143123295 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1634 115 0 0 chr10 2466155 2466373 -143122915 - AluSx SINE Alu -94 218 1 903 219 87 64 chr10 2466374 2466767 -143122521 + L1MDa LINE L1 1453 1854 -4686 851 167 13 8 chr10 2466896 2467136 -143122152 + CT-rich Low_complexity Low_complexity 1 241 0 2414 290 23 14 chr10 2467692 2468805 -143120483 - L1ME1 LINE L1 -5 6161 5039 1186 257 22 4 chr10 2468808 2469139 -143120149 - MER33 DNA MER1_type 0 324 1 1830 248 63 84 chr10 2469139 2470309 -143118979 - L1ME1 LINE L1 -1116 5030 3900 231 274 12 24 chr10 2470593 2470677 -143118611 + GA-rich Low_complexity Low_complexity 1 83 0 360 324 42 9 chr10 2470921 2471137 -143118151 - MIR SINE MIR -32 230 8 248 298 9 18 chr10 2471830 2471944 -143117344 + L1ME4a LINE L1 5944 6056 -65 342 0 0 0 chr10 2473804 2473842 -143115446 + (CA)n Simple_repeat Simple_repeat 2 39 0 453 161 0 0 chr10 2474298 2474385 -143114903 + (CA)n Simple_repeat Simple_repeat 2 88 0 374 38 0 19 chr10 2476306 2476359 -143112929 + (CA)n Simple_repeat Simple_repeat 1 52 0 21 36 0 0 chr10 2476628 2476656 -143112632 + AT_rich Low_complexity Low_complexity 1 28 0 229 281 22 11 chr10 2477397 2477486 -143111802 - L1ME LINE L1 -491 5630 5541 611 288 124 19 chr10 2477895 2478436 -143110852 - L1ME1 LINE L1 -2260 3886 3289 489 329 39 19 chr10 2478466 2478776 -143110512 - L1ME1 LINE L1 -3461 2685 2370 2457 249 33 12 chr10 2478962 2479654 -143109634 - L1MC3 LINE L1 0 7785 7079 1319 241 68 29 chr10 2479660 2480075 -143109213 - L1MC3 LINE L1 -937 6848 6418 1516 166 3 66 chr10 2480088 2480377 -143108911 + AluJo SINE Alu 11 281 -31 25 75 0 0 chr10 2480514 2480567 -143108721 + AT_rich Low_complexity Low_complexity 1 53 0 21 0 0 0 chr10 2480623 2480644 -143108644 + AT_rich Low_complexity Low_complexity 1 21 0 1101 222 66 26 chr10 2481337 2481695 -143107593 - MLT2D LTR ERVL -94 426 1 547 103 0 0 chr10 2481745 2481823 -143107465 + MADE1 DNA Mariner 1 78 -2 2085 132 0 0 chr10 2482961 2483256 -143106032 - AluSq SINE Alu -18 295 1 525 283 0 0 chr10 2483828 2483973 -143105315 - MIR SINE MIR -36 226 82 2010 144 38 123 chr10 2484127 2484600 -143104688 - Tigger2 DNA MER2_type 0 2718 2 318 313 23 16 chr10 2485031 2485159 -143104129 - MIR SINE MIR -133 129 1 1486 251 45 35 chr10 2486270 2486863 -143102425 + L1MDa LINE L1 1820 2418 -4122 1429 137 0 0 chr10 2487011 2487216 -143102072 - AluSx SINE Alu -107 205 1 1519 166 13 42 chr10 2487796 2487911 -143101377 + AluJo SINE Alu 2 119 -193 468 0 0 0 chr10 2487911 2487963 -143101325 + (CA)n Simple_repeat Simple_repeat 1 52 0 1519 166 13 42 chr10 2487963 2488154 -143101134 + AluJo SINE Alu 119 299 -13 23 0 0 0 chr10 2488154 2488177 -143101111 + AT_rich Low_complexity Low_complexity 1 23 0 183 139 0 0 chr10 2488805 2488841 -143100447 + (T)n Simple_repeat Simple_repeat 1 36 0 398 289 37 44 chr10 2489020 2489293 -143099995 + LTR37B LTR ERV1 198 468 0 182 231 39 39 chr10 2489999 2490051 -143099237 - MIR3 SINE MIR -7 201 150 683 206 25 0 chr10 2490066 2490226 -143099062 + L1MCa LINE L1 1769 1932 -4494 2355 97 3 0 chr10 2490255 2490565 -143098723 + AluSq SINE Alu 1 311 -2 319 276 140 7 chr10 2490635 2491064 -143098224 + MLT1E3 LTR MaLR 25 513 -111 565 160 14 83 chr10 2491352 2491496 -143097792 - L1M LINE L1 -775 5393 5260 230 331 60 60 chr10 2491541 2491692 -143097596 - L2 LINE L2 -39 3233 3083 228 399 114 0 chr10 2491900 2492093 -143097195 - L2 LINE L2 -549 2765 2551 180 313 0 16 chr10 2492204 2492268 -143097020 - MIR SINE MIR -2 260 198 6854 255 48 48 chr10 2492689 2496122 -143093166 - L1MEc LINE L1 -973 5671 2271 301 189 42 63 chr10 2496228 2496323 -143092965 - L1MEc LINE L1 -5568 974 882 648 312 56 37 chr10 2496404 2496865 -143092423 - L1MEc LINE L1 -5673 869 400 28 0 0 0 chr10 2498040 2498068 -143091220 + AT_rich Low_complexity Low_complexity 1 28 0 1388 226 76 21 chr10 2498271 2499087 -143090201 - L1MC3 LINE L1 -16 7769 7000 234 91 0 0 chr10 2499087 2499120 -143090168 + (TG)n Simple_repeat Simple_repeat 2 34 0 1388 226 76 21 chr10 2499120 2500849 -143088439 - L1MC3 LINE L1 -785 7000 5083 356 134 30 15 chr10 2500990 2501057 -143088231 + MADE1 DNA Mariner 1 68 -12 263 349 40 0 chr10 2501428 2501554 -143087734 + LTR16A LTR ERVL 298 428 -22 2196 116 0 3 chr10 2501554 2501865 -143087423 - AluSx SINE Alu -2 310 1 209 335 55 55 chr10 2504150 2504314 -143084974 - MIR SINE MIR -98 164 1 208 323 46 39 chr10 2505147 2505277 -143084011 - L2 LINE L2 -10 3303 3173 462 232 30 84 chr10 2506536 2506739 -143082549 + L1MA9 LINE L1 6099 6290 -1 348 24 0 0 chr10 2507666 2507707 -143081581 + (TG)n Simple_repeat Simple_repeat 1 41 0 256 330 58 111 chr10 2507820 2507977 -143081311 + L2 LINE L2 1764 1928 -1386 2619 116 28 0 chr10 2507977 2508331 -143080957 - THE1B LTR MaLR 0 364 1 256 330 58 111 chr10 2508331 2508707 -143080581 + L2 LINE L2 1928 2269 -1045 189 0 0 0 chr10 2510021 2510042 -143079246 + (TTCTG)n Simple_repeat Simple_repeat 2 22 0 743 89 0 89 chr10 2511666 2511789 -143077499 - MER57B LTR ERV1 0 434 323 1598 237 73 35 chr10 2511897 2511977 -143077311 - L1MD2 LINE L1 -10 6418 6342 2153 119 10 3 chr10 2511977 2512287 -143077001 - AluSq SINE Alu -1 312 1 1598 237 73 35 chr10 2512287 2513596 -143075692 - L1MD2 LINE L1 -86 6342 4909 1687 253 79 35 chr10 2513744 2513843 -143075445 - L1ME1 LINE L1 -15 6151 6058 1477 155 43 69 chr10 2513843 2514147 -143075141 + AluJo SINE Alu 1 296 -16 1687 253 79 35 chr10 2514147 2514683 -143074605 - L1ME1 LINE L1 -108 6058 5488 266 247 155 10 chr10 2514689 2514786 -143074502 - L1MD2 LINE L1 -6251 145 35 587 319 114 23 chr10 2514994 2515564 -143073724 + L2 LINE L2 2454 3076 -237 186 136 34 17 chr10 2515986 2516045 -143073243 + (TA)n Simple_repeat Simple_repeat 1 60 0 236 217 36 42 chr10 2516047 2516213 -143073075 + (TTATA)n Simple_repeat Simple_repeat 4 168 0 25 31 0 0 chr10 2516213 2516245 -143073043 + AT_rich Low_complexity Low_complexity 1 32 0 1100 245 62 28 chr10 2516924 2517058 -143072230 + MLT1C LTR MaLR 53 181 -286 2225 117 7 0 chr10 2517058 2517365 -143071923 + AluSp SINE Alu 1 309 -4 1100 245 62 28 chr10 2517365 2517630 -143071658 + MLT1C LTR MaLR 181 466 -1 22 0 0 0 chr10 2518217 2518239 -143071049 + AT_rich Low_complexity Low_complexity 1 22 0 210 37 0 0 chr10 2518989 2519016 -143070272 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1580 107 0 5 chr10 2519019 2519234 -143070054 - AluSg/x SINE Alu -22 290 77 887 235 59 56 chr10 2519340 2519663 -143069625 + MER33 DNA MER1_type 1 324 0 211 379 137 5 chr10 2519803 2520014 -143069274 - MIR SINE MIR -19 243 5 2161 103 40 7 chr10 2523178 2523478 -143065810 + AluSx SINE Alu 1 310 -2 327 209 0 0 chr10 2524087 2524197 -143065091 + (CA)n Simple_repeat Simple_repeat 2 111 0 515 216 6 0 chr10 2524226 2524393 -143064895 + (CA)n Simple_repeat Simple_repeat 2 169 0 25 0 0 0 chr10 2524802 2524827 -143064461 + AT_rich Low_complexity Low_complexity 1 25 0 427 195 11 11 chr10 2524833 2524920 -143064368 - AluJ/FRAM SINE Alu -6 306 220 8552 26 0 0 chr10 2524941 2526659 -143062629 - L1PA4 LINE L1 0 6155 4439 342 0 0 0 chr10 2527406 2527444 -143061844 + (TG)n Simple_repeat Simple_repeat 2 39 0 658 254 143 70 chr10 2529231 2529762 -143059526 - MLT1E3 LTR MaLR 0 624 24 2314 96 3 0 chr10 2529832 2530134 -143059154 - AluSq SINE Alu -10 303 1 597 177 73 8 chr10 2530273 2530397 -143058891 + L1MC3 LINE L1 7342 7473 -312 218 167 37 0 chr10 2530407 2530461 -143058827 + (TTATA)n Simple_repeat Simple_repeat 4 59 0 317 161 18 0 chr10 2530468 2530524 -143058764 - L1MC3 LINE L1 -312 7473 7417 381 300 13 21 chr10 2531262 2531620 -143057668 + T-rich Low_complexity Low_complexity 1 482 0 2316 67 3 0 chr10 2533484 2533784 -143055504 + AluY SINE Alu 4 304 -7 239 143 0 18 chr10 2535185 2535241 -143054047 + (TTTTC)n Simple_repeat Simple_repeat 1 55 0 550 0 29 0 chr10 2535916 2535986 -143053302 + (TAGA)n Simple_repeat Simple_repeat 4 75 0 2263 99 0 10 chr10 2536141 2536445 -143052843 - AluSp SINE Alu -12 301 1 244 251 76 58 chr10 2537594 2537765 -143051523 + L1M4 LINE L1 4484 4657 -1489 1272 273 26 0 chr10 2538025 2538370 -143050918 - L1MCb LINE L1 -5078 967 614 362 202 62 70 chr10 2538363 2538492 -143050796 + L1MCb LINE L1 934 1061 -4984 * 1336 153 7 65 chr10 2538484 2538759 -143050529 + L1MC1 LINE L1 5623 5881 -452 32 0 0 0 chr10 2538759 2538791 -143050497 + AT_rich Low_complexity Low_complexity 1 32 0 372 157 47 6 chr10 2538791 2538963 -143050325 + (TA)n Simple_repeat Simple_repeat 2 180 0 2111 131 3 0 chr10 2539734 2540032 -143049256 + AluSx SINE Alu 1 299 -13 286 282 13 0 chr10 2540385 2540463 -143048825 + MER116 DNA Mariner 1 79 -1 31 26 0 0 chr10 2540886 2540924 -143048364 + AT_rich Low_complexity Low_complexity 1 38 0 2038 127 3 29 chr10 2541336 2541650 -143047638 + AluSx SINE Alu 1 306 -6 257 246 0 0 chr10 2541689 2541750 -143047538 + (TAGA)n Simple_repeat Simple_repeat 1 61 0 208 381 41 0 chr10 2542635 2542732 -143046556 + L2 LINE L2 3158 3258 -14 2389 86 3 13 chr10 2542819 2542955 -143046333 + AluSx SINE Alu 1 137 -196 2288 85 7 16 chr10 2542955 2543262 -143046026 + AluY SINE Alu 1 304 -7 2389 86 3 13 chr10 2543262 2543461 -143045827 + AluSx SINE Alu 137 333 0 2189 96 7 10 chr10 2544120 2544412 -143044876 + AluSg SINE Alu 1 291 -19 2507 59 7 0 chr10 2545036 2545343 -143043945 - AluY SINE Alu -2 309 1 520 326 40 50 chr10 2546715 2547168 -143042120 - L1MEc LINE L1 -4574 2548 2105 279 93 0 0 chr10 2547168 2547211 -143042077 + (TG)n Simple_repeat Simple_repeat 2 44 0 520 326 40 50 chr10 2547211 2547531 -143041757 - L1MEc LINE L1 -5017 2105 1783 465 312 87 86 chr10 2547580 2548457 -143040831 - L1MEc LINE L1 -4891 1532 655 798 303 83 5 chr10 2548577 2549000 -143040288 - L1MEc LINE L1 -5949 474 19 1965 143 0 0 chr10 2549217 2549497 -143039791 + AluSx SINE Alu 1 280 -32 390 57 0 0 chr10 2549500 2549553 -143039735 + (CA)n Simple_repeat Simple_repeat 2 54 0 2514 55 0 0 chr10 2550000 2550310 -143038978 - AluY SINE Alu -1 310 1 233 140 18 0 chr10 2550447 2550504 -143038784 + GA-rich Low_complexity Low_complexity 2 59 0 1902 144 4 0 chr10 2551448 2551764 -143037524 + AluSx SINE Alu 6 322 0 21 0 0 0 chr10 2551912 2551933 -143037355 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr10 2553530 2553561 -143035727 + AT_rich Low_complexity Low_complexity 1 31 0 702 202 0 4 chr10 2554601 2554842 -143034446 + GA-rich Low_complexity Low_complexity 1 239 0 246 252 103 47 chr10 2554970 2555077 -143034211 - L2 LINE L2 0 3272 3160 1158 102 36 0 chr10 2555170 2555337 -143033951 + L1PA13 LINE L1 5972 6144 -19 556 321 32 0 chr10 2555706 2555893 -143033395 - MIR SINE MIR -4 258 66 337 255 0 57 chr10 2556958 2557064 -143032224 + L2 LINE L2 2458 2557 -757 1515 97 0 29 chr10 2557075 2557281 -143032007 - AluSq SINE Alu -113 200 1 239 280 32 64 chr10 2557317 2557442 -143031846 + L2 LINE L2 3193 3313 0 24 67 0 0 chr10 2558920 2558965 -143030323 + AT_rich Low_complexity Low_complexity 1 45 0 386 283 53 25 chr10 2560257 2560572 -143028716 - L1MEc LINE L1 -5918 478 91 * 2036 217 46 19 chr10 2560566 2561202 -143028086 - L1M4 LINE L1 -1316 4830 4178 2127 138 0 0 chr10 2562441 2562737 -143026551 + AluSx SINE Alu 3 298 -14 1407 233 43 62 chr10 2563548 2563865 -143025423 + MLT1D LTR MaLR 1 305 -200 370 145 53 26 chr10 2563865 2563941 -143025347 + MADE1 DNA Mariner 3 80 0 1407 233 43 62 chr10 2563941 2564136 -143025152 + MLT1D LTR MaLR 305 502 -3 1017 205 10 0 chr10 2564233 2564428 -143024860 + L1MC3 LINE L1 6666 6862 -923 1322 248 103 15 chr10 2564464 2564919 -143024369 + L1MC3 LINE L1 7282 7776 -9 29 28 0 0 chr10 2564943 2564979 -143024309 + AT_rich Low_complexity Low_complexity 1 36 0 26 0 0 0 chr10 2565152 2565178 -143024110 + AT_rich Low_complexity Low_complexity 1 26 0 437 306 36 16 chr10 2565228 2565421 -143023867 + L1MC5 LINE L1 6995 7191 -770 1924 131 17 17 chr10 2566064 2566361 -143022927 + AluSx SINE Alu 1 297 -15 394 281 82 0 chr10 2567749 2567884 -143021404 - MLT1H LTR MaLR -26 523 378 394 182 0 39 chr10 2567993 2568070 -143021218 - AluS SINE Alu -228 74 1 213 281 11 34 chr10 2568506 2568595 -143020693 - MIR SINE MIR -23 239 153 234 184 0 0 chr10 2569687 2569736 -143019552 + L1ME4a LINE L1 6069 6117 -4 369 298 99 33 chr10 2569961 2570233 -143019055 + MLT1H LTR MaLR 62 351 -198 920 60 0 0 chr10 2573387 2573504 -143015784 + L1PA4 LINE L1 6031 6147 -8 2029 69 0 138 chr10 2573904 2574253 -143015035 + AluY SINE Alu 1 301 -10 289 313 109 16 chr10 2574846 2574974 -143014314 + MIR SINE MIR 12 151 -111 32 43 0 0 chr10 2575881 2575927 -143013361 + AT_rich Low_complexity Low_complexity 1 46 0 329 311 0 0 chr10 2575930 2576020 -143013268 - L1MC4 LINE L1 -1339 6703 6614 316 322 0 0 chr10 2575952 2576042 -143013246 + L1MC4 LINE L1 6614 6703 -1339 * 2319 79 14 0 chr10 2576053 2576343 -143012945 - AluY SINE Alu -17 294 1 22 35 0 0 chr10 2576735 2576764 -143012524 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr10 2576899 2576928 -143012360 + AT_rich Low_complexity Low_complexity 1 29 0 454 259 78 18 chr10 2577261 2577427 -143011861 - MLT1E2 LTR MaLR -11 615 440 486 245 15 67 chr10 2577662 2577880 -143011408 + L1MCa LINE L1 1508 1906 -4701 1594 257 32 20 chr10 2577880 2578526 -143010762 + L1MCa LINE L1 2899 3552 -2874 488 264 110 0 chr10 2578906 2579088 -143010200 + MER5C DNA MER1_type 1 202 -122 205 195 0 0 chr10 2580541 2580582 -143008706 + (TA)n Simple_repeat Simple_repeat 1 41 0 2078 208 41 4 chr10 2581458 2581924 -143007364 + MER66B LTR ERV1 1 483 -3 226 308 19 19 chr10 2581927 2582031 -143007257 + L1MEd LINE L1 324 427 -5692 457 177 37 7 chr10 2582220 2582493 -143006795 + (TA)n Simple_repeat Simple_repeat 1 281 0 337 184 48 0 chr10 2582508 2582676 -143006612 + (TA)n Simple_repeat Simple_repeat 2 177 0 495 155 45 0 chr10 2582700 2583035 -143006253 + (TA)n Simple_repeat Simple_repeat 1 350 0 1858 199 63 22 chr10 2583035 2583493 -143005795 + L1MC2 LINE L1 5859 6335 -9 247 343 38 48 chr10 2583791 2584001 -143005287 + L3 LINE CR1 816 1023 -554 205 344 0 0 chr10 2584082 2584143 -143005145 - MIR SINE MIR -6 256 196 203 363 62 38 chr10 2584596 2584756 -143004532 + MIR SINE MIR 20 183 -79 265 222 0 48 chr10 2585086 2585149 -143004139 + MER4-int LTR ERV1 1112 1171 -5427 2278 110 7 0 chr10 2585898 2586207 -143003081 - AluSx SINE Alu -1 311 1 2026 113 7 7 chr10 2587003 2587287 -143002001 - AluSx SINE Alu -26 286 3 24 32 0 0 chr10 2588237 2588268 -143001020 + AT_rich Low_complexity Low_complexity 1 31 0 24 0 0 0 chr10 2588292 2588316 -143000972 + AT_rich Low_complexity Low_complexity 1 24 0 205 294 19 88 chr10 2589470 2589630 -142999658 + L2 LINE L2 2906 3054 -218 2440 110 22 0 chr10 2590054 2590410 -142998878 + THE1B LTR MaLR 1 364 0 213 39 0 0 chr10 2592036 2592062 -142997226 + (A)n Simple_repeat Simple_repeat 1 26 0 301 225 0 0 chr10 2592294 2592365 -142996923 - L1ME4a LINE L1 0 6121 6051 2457 48 7 0 chr10 2592926 2593218 -142996070 - AluY SINE Alu -8 303 10 260 338 14 27 chr10 2593700 2593848 -142995440 + L1MCc LINE L1 763 908 -5515 1976 111 18 56 chr10 2594096 2594331 -142994957 + THE1B LTR MaLR 3 223 -141 2160 121 0 3 chr10 2594331 2594629 -142994659 + AluSx SINE Alu 1 297 -15 1976 111 18 56 chr10 2594629 2594734 -142994554 + THE1B LTR MaLR 223 330 -34 669 305 44 29 chr10 2594817 2595229 -142994059 + L1MCc LINE L1 1197 1608 -4887 298 351 15 8 chr10 2595246 2595380 -142993908 + L1M4 LINE L1 4829 4963 -1183 612 283 44 9 chr10 2595386 2595612 -142993676 + L1M4 LINE L1 4004 4237 -1909 789 272 46 14 chr10 2595631 2595977 -142993311 + L1M4 LINE L1 4292 4648 -1498 249 281 66 12 chr10 2598140 2598307 -142990981 + L1MCc LINE L1 523 698 -6243 797 256 34 78 chr10 2598961 2599507 -142989781 + L1MCc LINE L1 1683 2213 -4728 198 0 0 0 chr10 2599973 2599995 -142989293 + (TTTTA)n Simple_repeat Simple_repeat 3 24 0 2153 117 0 7 chr10 2600006 2600304 -142988984 - AluSx SINE Alu -15 297 2 1335 72 0 0 chr10 2600789 2600969 -142988319 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 693 79 26 9 chr10 2600969 2601083 -142988205 + (TTTC)n Simple_repeat Simple_repeat 4 119 0 214 29 57 0 chr10 2601739 2601774 -142987514 + (TA)n Simple_repeat Simple_repeat 1 37 0 281 26 26 0 chr10 2603196 2603234 -142986054 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 243 0 0 0 chr10 2603913 2603940 -142985348 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2649 118 3 0 chr10 2604116 2604490 -142984798 - THE1C LTR MaLR 0 375 1 2354 136 24 2 chr10 2604852 2605263 -142984025 + MSTB1 LTR MaLR 1 420 -12 21 82 0 0 chr10 2605841 2605890 -142983398 + AT_rich Low_complexity Low_complexity 1 49 0 1644 103 45 5 chr10 2606190 2606414 -142982874 + AluSx SINE Alu 60 292 -20 2520 70 0 3 chr10 2607485 2607797 -142981491 - AluY SINE Alu 0 311 1 340 226 50 99 chr10 2607974 2608155 -142981133 + HAL1b LINE L1 634 805 -543 23 54 0 0 chr10 2608607 2608644 -142980644 + AT_rich Low_complexity Low_complexity 1 37 0 2361 265 128 6 chr10 2610215 2611074 -142978214 + L1M4b LINE L1 12 975 -5884 2110 267 56 46 chr10 2611553 2612723 -142976565 + L1M4b LINE L1 1120 2300 -4659 998 109 0 0 chr10 2613113 2613241 -142976047 - AluSq/x SINE Alu -185 128 1 574 287 0 32 chr10 2613304 2613520 -142975768 - MER3 DNA MER1_type 0 209 1 1759 199 17 6 chr10 2613716 2614077 -142975211 - MLT1A1 LTR MaLR 0 365 1 1275 265 23 25 chr10 2614277 2614748 -142974540 - MER110 LTR ERV1 -5 486 17 207 186 0 0 chr10 2615565 2615608 -142973680 + (CATATA)n Simple_repeat Simple_repeat 6 48 0 23 0 0 0 chr10 2615860 2615883 -142973405 + AT_rich Low_complexity Low_complexity 1 23 0 1327 261 57 11 chr10 2616401 2616841 -142972447 - LTR40b LTR ERVL 0 462 3 441 193 205 91 chr10 2617200 2617454 -142971834 + MLT1C LTR MaLR 187 443 -24 367 68 34 0 chr10 2617462 2617521 -142971767 + (TG)n Simple_repeat Simple_repeat 1 61 0 3530 188 33 11 chr10 2618318 2619015 -142970273 - MER44D DNA MER2_type -7 598 15 311 298 26 18 chr10 2619161 2619275 -142970013 + L1MC/D LINE L1 5547 5661 -2147 2115 103 7 33 chr10 2619287 2619589 -142969699 + AluSx SINE Alu 1 294 -18 231 36 0 0 chr10 2619589 2619617 -142969671 + (GGAA)n Simple_repeat Simple_repeat 3 30 0 290 194 0 10 chr10 2620286 2620384 -142968904 + (CA)n Simple_repeat Simple_repeat 1 97 0 22 94 0 0 chr10 2620481 2620545 -142968743 + AT_rich Low_complexity Low_complexity 1 64 0 261 0 0 0 chr10 2620852 2620881 -142968407 + (TG)n Simple_repeat Simple_repeat 2 30 0 315 279 68 26 chr10 2621598 2621788 -142967500 - LTR16B LTR ERVL 0 464 267 274 240 54 0 chr10 2626822 2626951 -142962337 + (CTAG)n Simple_repeat Simple_repeat 3 138 0 2182 55 15 0 chr10 2628430 2628701 -142960587 - AluY SINE Alu -7 304 30 240 301 113 23 chr10 2628760 2628893 -142960395 + MIR SINE MIR 115 259 -3 22 0 0 0 chr10 2631336 2631358 -142957930 + AT_rich Low_complexity Low_complexity 1 22 0 213 39 0 0 chr10 2632821 2632847 -142956441 + (CA)n Simple_repeat Simple_repeat 1 26 0 235 330 9 57 chr10 2633525 2633631 -142955657 - MIR SINE MIR -68 140 40 240 200 0 0 chr10 2634227 2634287 -142955001 + (TA)n Simple_repeat Simple_repeat 1 60 0 566 344 114 14 chr10 2634645 2635003 -142954285 + L2 LINE L2 2920 3313 0 268 309 36 12 chr10 2635094 2635178 -142954110 - L2 LINE L2 -19 3294 3209 813 205 127 72 chr10 2635277 2635623 -142953665 + MLT1A1 LTR MaLR 1 365 0 1585 215 0 0 chr10 2635929 2636213 -142953075 + AluJb SINE Alu 10 293 -19 1279 209 38 62 chr10 2636878 2637251 -142952037 + MLT1A1 LTR MaLR 1 364 -1 25 0 0 0 chr10 2637716 2637741 -142951547 + AT_rich Low_complexity Low_complexity 1 25 0 247 307 162 0 chr10 2638282 2638461 -142950827 - L1ME LINE L1 -300 5864 5657 4484 248 56 53 chr10 2638481 2638861 -142950427 + L1M4 LINE L1 2 379 -6267 2363 129 11 5 chr10 2638861 2639234 -142950054 + THE1C LTR MaLR 1 375 0 4484 248 56 53 chr10 2639234 2640240 -142949048 + L1M4 LINE L1 379 1381 -5265 2321 114 0 0 chr10 2640240 2640546 -142948742 + AluSq SINE Alu 1 306 -7 4484 248 56 53 chr10 2640546 2641648 -142947640 + L1M4 LINE L1 1381 2615 -4031 421 221 60 59 chr10 2641744 2641937 -142947351 - L1ME LINE L1 -683 5479 5288 180 0 0 0 chr10 2641937 2641957 -142947331 + (TA)n Simple_repeat Simple_repeat 2 21 0 2277 80 0 0 chr10 2641957 2642246 -142947042 - AluY SINE Alu -22 289 1 421 221 60 59 chr10 2642246 2642336 -142946952 - L1ME LINE L1 -873 5289 5192 234 0 0 0 chr10 2642385 2642411 -142946877 + (CA)n Simple_repeat Simple_repeat 1 26 0 261 310 133 22 chr10 2642438 2642664 -142946624 + L1MC/D LINE L1 377 627 -5443 267 313 0 0 chr10 2642837 2642933 -142946355 + HsTC2 DNA Tc2 1802 1897 -1 206 323 16 0 chr10 2644861 2644923 -142944365 + C-rich Low_complexity Low_complexity 5 67 0 348 354 50 0 chr10 2645018 2645179 -142944109 - MIR SINE MIR -74 188 20 309 197 61 0 chr10 2645207 2645273 -142944015 - FRAM/FAM SINE Alu -90 85 16 261 83 0 0 chr10 2695547 2695583 -142893705 + (TG)n Simple_repeat Simple_repeat 2 37 0 1708 245 51 22 chr10 2695646 2696312 -142892976 + L1MC/D LINE L1 3742 4426 -1654 1561 230 91 16 chr10 2696304 2696979 -142892309 + L1MC/D LINE L1 5016 5741 -435 * 213 313 48 36 chr10 2697110 2697193 -142892095 + L2 LINE L2 3146 3229 -43 225 240 0 0 chr10 2697351 2697426 -142891862 + (TA)n Simple_repeat Simple_repeat 1 75 0 659 126 14 28 chr10 2698103 2698246 -142891042 + GA-rich Low_complexity Low_complexity 4 144 0 517 260 120 67 chr10 2700705 2701121 -142888167 - MLT1H LTR MaLR -46 503 66 22 35 0 0 chr10 2702997 2703026 -142886262 + AT_rich Low_complexity Low_complexity 1 29 0 25 31 0 0 chr10 2704119 2704151 -142885137 + AT_rich Low_complexity Low_complexity 1 32 0 1861 193 75 2 chr10 2704156 2704555 -142884733 + MSTA LTR MaLR 1 428 0 23 33 0 0 chr10 2705091 2705121 -142884167 + AT_rich Low_complexity Low_complexity 1 30 0 1751 179 26 13 chr10 2705138 2705446 -142883842 + AluJo SINE Alu 1 312 0 2193 201 47 43 chr10 2705687 2706200 -142883088 - LTR40a LTR ERVL 0 519 5 1945 139 3 3 chr10 2706247 2706542 -142882746 - AluSx SINE Alu -17 295 1 299 304 13 0 chr10 2706549 2706628 -142882660 - L2 LINE L2 -17 3255 3176 264 350 53 0 chr10 2707888 2708094 -142881194 - LTR33 LTR ERVL 0 521 305 237 239 33 54 chr10 2708726 2708818 -142880470 - MER5B DNA MER1_type -12 166 77 1414 150 24 8 chr10 2709925 2710172 -142879116 + L1MA4 LINE L1 6042 6292 -8 21 36 0 0 chr10 2710711 2710739 -142878549 + AT_rich Low_complexity Low_complexity 1 28 0 5464 102 11 7 chr10 2712328 2713126 -142876162 - L1PA14 LINE L1 -123 6038 5237 1492 160 29 64 chr10 2714053 2714236 -142875052 - AluJb SINE Alu -10 302 133 2259 111 3 13 chr10 2714236 2714551 -142874737 - AluSx SINE Alu 0 312 1 1492 160 29 64 chr10 2714551 2714680 -142874608 - AluJb SINE Alu -179 133 1 200 244 90 13 chr10 2714964 2715042 -142874246 + MIR3 SINE MIR 121 204 -4 478 239 26 0 chr10 2715271 2715388 -142873900 + MER58B DNA MER1_type 222 341 0 407 351 52 0 chr10 2715579 2715753 -142873535 + MIR SINE MIR 74 256 -6 216 0 0 0 chr10 2715764 2715788 -142873500 + (CA)n Simple_repeat Simple_repeat 2 25 0 801 185 0 0 chr10 2717271 2717449 -142871839 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 733 317 16 12 chr10 2718037 2718280 -142871008 - MIR SINE MIR -3 259 16 230 227 41 21 chr10 2718380 2718477 -142870811 + (TA)n Simple_repeat Simple_repeat 1 99 0 255 31 0 0 chr10 2718618 2718650 -142870638 + (A)n Simple_repeat Simple_repeat 1 32 0 216 217 17 17 chr10 2720147 2720207 -142869081 + (CA)n Simple_repeat Simple_repeat 1 60 0 1848 141 0 0 chr10 2720712 2720974 -142868314 + AluSx SINE Alu 46 307 -5 183 80 0 0 chr10 2720999 2721024 -142868264 + (CAA)n Simple_repeat Simple_repeat 1 25 0 2776 96 8 11 chr10 2723515 2723880 -142865408 - THE1B LTR MaLR 0 364 1 207 319 29 0 chr10 2724061 2724130 -142865158 + MIR SINE MIR 56 126 -136 30 27 0 0 chr10 2725015 2725052 -142864236 + AT_rich Low_complexity Low_complexity 1 37 0 222 313 36 12 chr10 2726233 2726316 -142862972 + MIR3 SINE MIR 15 99 -109 264 358 80 0 chr10 2727507 2727658 -142861630 + HERV16 LTR ERVL 1412 1574 -3422 1448 343 48 50 chr10 2727804 2728788 -142860500 + HERV16 LTR ERVL 2380 3091 -1905 189 180 0 0 chr10 2729449 2729499 -142859789 + A-rich Low_complexity Low_complexity 1 50 0 337 213 67 0 chr10 2730743 2730818 -142858470 + Tigger3(Golem) DNA MER2_type 1 80 -2949 483 229 38 0 chr10 2730947 2731052 -142858236 + Tigger3(Golem) DNA MER2_type 2930 3038 0 225 267 17 0 chr10 2731923 2731983 -142857305 + (TG)n Simple_repeat Simple_repeat 2 62 0 268 313 146 30 chr10 2732549 2732782 -142856506 + L3 LINE CR1 701 960 -617 486 206 199 0 chr10 2733141 2733272 -142856016 - MER45A DNA AcHobo -19 159 3 2719 207 51 3 chr10 2733421 2734014 -142855274 - L1MB3 LINE L1 -15 6168 5548 694 224 42 21 chr10 2734009 2734250 -142855038 - L1MB3 LINE L1 -3261 2885 2640 * 1236 217 44 0 chr10 2734273 2734545 -142854743 - L1M3 LINE L1 -624 6519 6236 * 4216 255 95 28 chr10 2734542 2737189 -142852099 - L1M3 LINE L1 -2105 5001 1971 1854 189 0 0 chr10 2737189 2737490 -142851798 - AluSx SINE Alu -6 306 6 4216 255 95 28 chr10 2737490 2738233 -142851055 - L1M3 LINE L1 -5135 1971 1279 273 309 16 16 chr10 2738627 2738750 -142850538 - L1M3 LINE L1 -6903 127 5 232 197 115 0 chr10 2738759 2738820 -142850468 + MLT1F LTR MaLR 475 542 0 2379 150 28 14 chr10 2739110 2739469 -142849819 - THE1B LTR MaLR 0 364 1 1262 181 110 13 chr10 2740077 2740401 -142848887 - Tigger1 DNA MER2_type 0 2418 1 2228 110 0 0 chr10 2741926 2742226 -142847062 - AluSx SINE Alu -12 300 1 25 31 0 0 chr10 2743523 2743555 -142845733 + AT_rich Low_complexity Low_complexity 1 32 0 348 248 8 56 chr10 2743800 2743925 -142845363 + MER58 DNA MER1_type 2301 2419 -1 2311 88 0 0 chr10 2744185 2744480 -142844808 + AluY SINE Alu 1 295 -16 207 273 0 0 chr10 2744961 2745005 -142844283 + MIR SINE MIR 219 262 0 22 56 0 0 chr10 2745465 2745501 -142843787 + AT_rich Low_complexity Low_complexity 1 36 0 1794 121 7 78 chr10 2745502 2745809 -142843479 - AluSg SINE Alu -25 285 1 819 127 32 16 chr10 2745920 2746046 -142843242 + L1PA8A LINE L1 6004 6131 0 416 106 0 30 chr10 2746071 2746137 -142843151 + L2 LINE L2 3250 3313 0 662 301 81 31 chr10 2746809 2747168 -142842120 + L1ME3A LINE L1 5740 6116 -54 334 279 99 83 chr10 2749034 2749517 -142839771 + MLT1H LTR MaLR 10 500 -49 226 228 110 118 chr10 2749745 2749881 -142839407 + MLT1I LTR MaLR 249 383 -26 1231 122 5 46 chr10 2749942 2750139 -142839149 - L1PA8A LINE L1 -2 6129 5941 2488 72 0 3 chr10 2750169 2750476 -142838812 + AluY SINE Alu 6 311 0 359 327 9 9 chr10 2750479 2750586 -142838702 - MIR SINE MIR -141 121 15 255 103 0 0 chr10 2751095 2751134 -142838154 + (TTTTA)n Simple_repeat Simple_repeat 4 42 0 321 243 157 29 chr10 2751937 2752077 -142837211 - L2 LINE L2 -4 3309 3152 2166 96 4 0 chr10 2752098 2752378 -142836910 - AluSc SINE Alu -28 281 1 4789 85 2 0 chr10 2752912 2753512 -142835776 - L1PA8 LINE L1 0 6172 5572 282 297 133 16 chr10 2753696 2753824 -142835464 + MER5B DNA MER1_type 2 144 -34 185 309 18 0 chr10 2754877 2754932 -142834356 - MIR3 SINE MIR -7 201 146 3196 196 60 4 chr10 2754943 2755458 -142833830 - L1MA4A LINE L1 0 6303 5739 279 79 0 0 chr10 2755458 2755496 -142833792 + (TTCA)n Simple_repeat Simple_repeat 4 41 0 3196 196 60 4 chr10 2755496 2755663 -142833625 - L1MA4A LINE L1 -564 5739 5583 1533 111 53 0 chr10 2755829 2756037 -142833251 - AluSg SINE Alu -52 258 40 389 196 0 10 chr10 2757508 2757605 -142831683 + (TG)n Simple_repeat Simple_repeat 2 97 0 1507 154 3 65 chr10 2758359 2758651 -142830637 + AluJo SINE Alu 9 282 -30 481 317 102 15 chr10 2758700 2759104 -142830184 - L2 LINE L2 -1717 1597 1159 366 223 108 47 chr10 2759794 2759966 -142829322 - MLT1J1 LTR MaLR -8 417 246 203 231 31 0 chr10 2763115 2763180 -142826108 + (TCTG)n Simple_repeat Simple_repeat 2 68 0 297 287 165 9 chr10 2763747 2763862 -142825426 + MIR SINE MIR 27 159 -103 218 309 25 12 chr10 2763877 2763958 -142825330 + MIR SINE MIR 116 197 -65 2406 92 0 0 chr10 2764212 2764515 -142824773 + AluSq SINE Alu 1 303 -10 372 357 28 7 chr10 2764667 2764810 -142824478 + MER91A DNA MER1_type 3 148 -48 212 184 0 0 chr10 2765023 2765061 -142824227 + A-rich Low_complexity Low_complexity 1 38 0 307 290 43 91 chr10 2765321 2765865 -142823423 + L1ME LINE L1 5327 5855 -266 201 231 39 0 chr10 2765865 2765917 -142823371 + (TGGA)n Simple_repeat Simple_repeat 3 56 0 211 118 29 0 chr10 2767251 2767285 -142822003 + L2 LINE L2 3233 3267 -5 182 61 0 30 chr10 2767361 2767394 -142821894 + (TTTTG)n Simple_repeat Simple_repeat 1 32 0 1717 142 0 0 chr10 2767397 2767637 -142821651 - AluJb SINE Alu -27 285 46 28 48 0 0 chr10 2767687 2767729 -142821559 + AT_rich Low_complexity Low_complexity 1 42 0 24 32 0 0 chr10 2768203 2768234 -142821054 + AT_rich Low_complexity Low_complexity 1 31 0 3408 170 69 11 chr10 2769325 2769552 -142819736 - L1PB4 LINE L1 -3 6153 5941 2047 147 69 30 chr10 2769552 2769913 -142819375 + THE1C LTR MaLR 1 375 0 3408 170 69 11 chr10 2769913 2770326 -142818962 - L1PB4 LINE L1 -215 5941 5476 1096 194 51 0 chr10 2770326 2770522 -142818766 - AluJo SINE Alu -20 292 87 47 33 0 0 chr10 2771471 2771532 -142817756 + AT_rich Low_complexity Low_complexity 1 61 0 669 169 0 78 chr10 2771698 2771871 -142817417 + FLAM_C SINE Alu 1 133 0 1929 158 3 16 chr10 2771877 2772193 -142817095 - AluJb SINE Alu 0 312 1 180 167 0 28 chr10 2772943 2772979 -142816309 + L2 LINE L2 3222 3256 -16 180 263 0 66 chr10 2773116 2773192 -142816096 + L3 LINE CR1 1459 1529 -48 2192 121 7 0 chr10 2773353 2773660 -142815628 - AluSc SINE Alu 0 309 1 454 331 14 0 chr10 2774418 2774563 -142814725 - MIR SINE MIR -2 260 114 2243 69 3 17 chr10 2776190 2776481 -142812807 - AluSc SINE Alu -22 287 1 634 216 112 0 chr10 2777408 2777533 -142811755 - FAM SINE Alu -27 158 20 2050 136 3 0 chr10 2777599 2777894 -142811394 + AluSq SINE Alu 1 296 -17 2153 118 7 3 chr10 2777929 2778226 -142811062 + AluSx SINE Alu 1 298 -14 216 0 0 0 chr10 2778840 2778864 -142810424 + (CAATT)n Simple_repeat Simple_repeat 2 25 0 273 233 80 20 chr10 2780259 2780374 -142808914 + MLT1J LTR MaLR 46 181 -290 324 333 81 38 chr10 2780635 2780701 -142808587 + L1ME3A LINE L1 5680 5742 -428 2077 130 10 0 chr10 2780701 2781000 -142808288 + AluSg SINE Alu 5 306 -4 324 333 81 38 chr10 2781000 2781194 -142808094 + L1ME3A LINE L1 5742 5951 -219 1550 207 68 19 chr10 2781208 2781575 -142807713 - MLT1B LTR MaLR -2 388 4 435 137 0 0 chr10 2781739 2781812 -142807476 + (CA)n Simple_repeat Simple_repeat 2 74 0 201 237 13 26 chr10 2782063 2782139 -142807149 + A-rich Low_complexity Low_complexity 2 76 0 41 0 0 0 chr10 2782827 2782868 -142806420 + AT_rich Low_complexity Low_complexity 1 41 0 261 0 0 0 chr10 2783665 2783694 -142805594 + (CA)n Simple_repeat Simple_repeat 2 30 0 26 30 0 0 chr10 2783760 2783793 -142805495 + AT_rich Low_complexity Low_complexity 1 33 0 867 182 54 54 chr10 2784151 2784354 -142804934 + THE1B LTR MaLR 107 309 -55 1057 284 101 22 chr10 2784522 2785036 -142804252 - L2 LINE L2 -1 3312 2748 423 303 229 14 chr10 2785072 2785425 -142803863 - L2 LINE L2 -695 2619 2191 3346 113 26 27 chr10 2785443 2786018 -142803270 + MER51A LTR ERV1 1 634 0 323 285 145 73 chr10 2786018 2786322 -142802966 - L2 LINE L2 -1126 2188 1853 2257 115 0 3 chr10 2786322 2786636 -142802652 + AluSq SINE Alu 1 313 0 323 285 145 73 chr10 2786636 2786689 -142802599 - L2 LINE L2 -1461 1853 1805 24 0 0 0 chr10 2786711 2786735 -142802553 + AT_rich Low_complexity Low_complexity 1 24 0 1149 160 27 18 chr10 2786735 2786954 -142802334 - L1MB2 LINE L1 -3 6168 5948 384 262 0 12 chr10 2786993 2787077 -142802211 - MER5A DNA MER1_type -106 83 1 490 337 12 0 chr10 2787089 2787261 -142802027 - MER5B DNA MER1_type -4 174 1 * 935 309 182 19 chr10 2787261 2787901 -142801387 - L2 LINE L2 -1800 1514 770 502 308 140 22 chr10 2787901 2788222 -142801066 - L2 LINE L2 -2946 368 10 2177 134 3 0 chr10 2788668 2788975 -142800313 + AluSx SINE Alu 1 308 -4 2237 122 0 3 chr10 2791472 2791783 -142797505 + AluSg SINE Alu 1 310 0 9769 163 9 6 chr10 2792304 2795051 -142794237 + L1PB1 LINE L1 3394 6151 0 2094 127 3 0 chr10 2795196 2795487 -142793801 - AluSx SINE Alu -20 292 1 223 284 43 43 chr10 2795950 2796066 -142793222 + L2 LINE L2 2170 2285 -1029 396 123 15 0 chr10 2796482 2796547 -142792741 - MER41B LTR ERV1 -86 549 484 342 217 36 0 chr10 2796761 2796927 -142792361 + (TA)n Simple_repeat Simple_repeat 1 172 0 931 236 75 78 chr10 2796991 2797402 -142791886 + MLT2D LTR ERVL 1 410 -4 27 73 0 0 chr10 2799181 2799236 -142790052 + AT_rich Low_complexity Low_complexity 1 55 0 207 292 0 42 chr10 2799279 2799375 -142789913 + (TATATG)n Simple_repeat Simple_repeat 6 97 0 249 341 0 11 chr10 2800190 2800281 -142789007 + CT-rich Low_complexity Low_complexity 4 93 0 2270 119 3 0 chr10 2800938 2801248 -142788040 + AluSp SINE Alu 1 311 -2 1999 135 4 4 chr10 2801684 2802008 -142787280 + AluSx SINE Alu 3 326 0 3174 147 18 6 chr10 2802169 2802672 -142786616 - MER75 DNA T2_type -5 509 1 576 249 125 66 chr10 2803256 2803743 -142785545 - HAL1 LINE L1 -115 2392 1877 1262 293 122 52 chr10 2803840 2803899 -142785389 - HAL1 LINE L1 -794 1713 1660 2371 95 0 0 chr10 2803899 2804195 -142785093 + AluY SINE Alu 1 296 -15 1262 293 122 52 chr10 2804195 2804914 -142784374 - HAL1 LINE L1 -847 1660 837 267 54 0 0 chr10 2804914 2804951 -142784337 + (TG)n Simple_repeat Simple_repeat 2 38 0 1262 293 122 52 chr10 2804951 2805244 -142784044 - HAL1 LINE L1 -1670 837 566 234 300 71 52 chr10 2805459 2805669 -142783619 - HAL1 LINE L1 -2266 241 28 298 320 25 16 chr10 2805857 2805979 -142783309 - MIR3 SINE MIR -31 177 55 224 283 88 38 chr10 2806907 2807066 -142782222 + L2 LINE L2 2073 2239 -1075 406 317 63 10 chr10 2807085 2807290 -142781998 - MIR SINE MIR -1 261 46 396 374 94 11 chr10 2807450 2807918 -142781370 + L2 LINE L2 2361 2867 -447 304 315 128 62 chr10 2808233 2808639 -142780649 - L2 LINE L2 -337 2977 2545 376 104 30 15 chr10 2809000 2809067 -142780221 + MADE1 DNA Mariner 13 80 0 211 246 18 0 chr10 2809479 2809536 -142779752 + GA-rich Low_complexity Low_complexity 4 61 0 271 289 104 81 chr10 2810477 2810714 -142778574 + L1MC4 LINE L1 6197 6427 -1466 2275 115 3 0 chr10 2810714 2811018 -142778270 + AluSx SINE Alu 1 305 -7 271 289 104 81 chr10 2811018 2811348 -142777940 + L1MC4 LINE L1 6427 6862 -1031 186 103 0 0 chr10 2812358 2812387 -142776901 + (TATATG)n Simple_repeat Simple_repeat 4 32 0 344 307 102 49 chr10 2812431 2812636 -142776652 + HAL1b LINE L1 392 607 -741 2295 143 28 6 chr10 2812651 2813007 -142776281 - THE1B LTR MaLR 0 364 1 593 90 0 0 chr10 2813794 2813872 -142775416 - MADE1 DNA Mariner -2 78 1 235 170 21 0 chr10 2816758 2816805 -142772483 + T-rich Low_complexity Low_complexity 2 49 0 2285 185 58 28 chr10 2818085 2819219 -142770069 + L1MB2 LINE L1 6 1381 -5003 * 2321 238 70 13 chr10 2819212 2820255 -142769033 + L1MB2 LINE L1 2239 3345 -3037 6091 202 38 37 chr10 2820443 2821969 -142767319 + L1MB2 LINE L1 3952 5479 -903 3340 180 30 9 chr10 2821969 2822598 -142766690 + L1MB2 LINE L1 5756 6397 -10 198 277 106 21 chr10 2823148 2823242 -142766046 - MIR3 SINE MIR -95 113 12 214 294 35 35 chr10 2824207 2824292 -142764996 + L2 LINE L2 3179 3263 -9 1883 201 31 3 chr10 2824300 2824654 -142764634 + MLT1A1 LTR MaLR 2 365 0 21 36 0 0 chr10 2825034 2825062 -142764226 + AT_rich Low_complexity Low_complexity 1 28 0 5113 86 5 5 chr10 2825072 2825725 -142763563 + L1PA10 LINE L1 5506 6158 -10 280 261 30 37 chr10 2825815 2825949 -142763339 + L1ME4a LINE L1 5756 5888 -233 258 231 0 0 chr10 2826526 2826591 -142762697 + (CA)n Simple_repeat Simple_repeat 2 66 0 470 287 45 42 chr10 2826672 2826961 -142762327 + L1ME3A LINE L1 5667 5956 -214 1326 113 5 0 chr10 2827063 2827249 -142762039 + THE1C LTR MaLR 1 187 -188 756 219 114 0 chr10 2827249 2827450 -142761838 + L1M4 LINE L1 2451 2674 -3472 1636 248 82 42 chr10 2827595 2827919 -142761369 + L1M4 LINE L1 2897 3206 -2940 180 0 0 0 chr10 2827919 2827939 -142761349 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1636 248 82 42 chr10 2827939 2828528 -142760760 + L1M4 LINE L1 3206 3847 -2299 629 340 43 24 chr10 2828534 2828955 -142760333 + L1MA9 LINE L1 580 1008 -5711 2028 208 38 25 chr10 2829460 2830049 -142759239 + L1MA9 LINE L1 1445 2039 -4680 * 2425 185 12 144 chr10 2830045 2830246 -142759042 + L1MA9 LINE L1 5532 5758 -1175 5449 44 5 2 chr10 2830246 2831287 -142758001 - SVA Other Other -954 1384 16 2425 185 12 144 chr10 2831287 2832123 -142757165 + L1MA9 LINE L1 5758 6435 -498 930 193 56 5 chr10 2832222 2832473 -142756815 + L1MA9 LINE L1 6424 6709 -101 3055 224 112 4 chr10 2832473 2833100 -142756188 + L1MB7 LINE L1 5297 6027 -157 1600 112 139 147 chr10 2833100 2833261 -142756027 + MSTA LTR MaLR 1 162 -266 2227 121 0 0 chr10 2833261 2833566 -142755722 + AluSx SINE Alu 1 305 -7 1600 112 139 147 chr10 2833566 2833834 -142755454 + MSTA LTR MaLR 162 427 -1 3055 224 112 4 chr10 2833834 2833991 -142755297 + L1MB7 LINE L1 6027 6166 -18 1481 247 34 36 chr10 2834401 2834975 -142754313 + L1ME LINE L1 5163 5739 -425 2132 122 0 0 chr10 2835109 2835405 -142753883 - AluSx SINE Alu -14 298 3 2015 158 27 27 chr10 2835407 2835775 -142753513 - Tigger2a DNA MER2_type -66 368 1 566 247 97 14 chr10 2835836 2836115 -142753173 + L1M4 LINE L1 2880 3181 -2965 28 29 0 0 chr10 2836300 2836335 -142752953 + AT_rich Low_complexity Low_complexity 1 35 0 377 321 47 69 chr10 2836781 2837343 -142751945 - L2 LINE L2 -1 3312 2766 21 0 0 0 chr10 2837499 2837520 -142751768 + AT_rich Low_complexity Low_complexity 1 21 0 1992 149 0 13 chr10 2837520 2837821 -142751467 - AluSx SINE Alu -15 297 1 2582 66 0 0 chr10 2839644 2839949 -142749339 - AluY SINE Alu -6 305 1 198 0 0 0 chr10 2840761 2840783 -142748505 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 2087 121 0 0 chr10 2840785 2841066 -142748222 - AluSx SINE Alu -31 281 1 26 23 0 23 chr10 2841276 2841290 -142747998 + AT_rich Low_complexity Low_complexity 1 14 -29 2122 102 3 3 chr10 2841290 2841574 -142747714 + AluSg1 SINE Alu 1 284 -25 26 23 0 23 chr10 2841574 2841603 -142747685 + AT_rich Low_complexity Low_complexity 14 43 0 192 302 47 38 chr10 2843621 2843727 -142745561 - L3b LINE CR1 -209 1374 1268 1723 207 42 45 chr10 2843987 2844127 -142745161 - L1MA7 LINE L1 -1 6290 6151 267 31 0 0 chr10 2844127 2844159 -142745129 + (TG)n Simple_repeat Simple_repeat 1 32 0 1723 207 42 45 chr10 2844159 2844443 -142744845 - L1MA7 LINE L1 -140 6151 5867 973 203 38 38 chr10 2844782 2845018 -142744270 + L1MCa LINE L1 21 256 -6170 * 1192 233 76 3 chr10 2845017 2845334 -142743954 + L1MCa LINE L1 787 1126 -5300 1735 153 7 7 chr10 2845563 2845838 -142743450 + AluJo SINE Alu 1 275 -37 377 273 30 15 chr10 2847084 2847216 -142742072 + MLT1H LTR MaLR 392 525 -24 400 172 164 70 chr10 2847323 2847451 -142741837 - MLT1I LTR MaLR 0 549 280 306 302 38 0 chr10 2848984 2849090 -142740198 - L1MC4 LINE L1 -1340 6702 6593 210 116 23 23 chr10 2849432 2849475 -142739813 + T-rich Low_complexity Low_complexity 5 47 0 187 54 54 0 chr10 2849636 2849673 -142739615 + (TA)n Simple_repeat Simple_repeat 2 40 0 282 157 58 25 chr10 2849853 2850039 -142739249 + (TA)n Simple_repeat Simple_repeat 1 192 0 1452 255 42 0 chr10 2850956 2851289 -142737999 + MER7A DNA MER2_type 1 345 -1 2578 219 16 66 chr10 2851374 2851802 -142737486 + MER82 DNA MER2_type 1 384 -269 2126 135 0 0 chr10 2851802 2852131 -142737157 + AluSx SINE Alu 1 312 0 2578 219 16 66 chr10 2852131 2852381 -142736907 + MER82 DNA MER2_type 384 645 -8 264 286 14 0 chr10 2852454 2852524 -142736764 + MER46C DNA MER2_type 259 329 -9 1600 279 139 16 chr10 2853021 2853763 -142735525 + MER97b DNA MER1_type? 4 836 -217 24 67 0 0 chr10 2853967 2854012 -142735276 + AT_rich Low_complexity Low_complexity 1 45 0 264 187 77 66 chr10 2854016 2854107 -142735181 + MER97a DNA MER1_type? 795 886 -8 276 186 114 0 chr10 2855100 2855170 -142734118 - MER116 DNA Mariner -2 78 1 1768 144 3 144 chr10 2855265 2855655 -142733633 - MER1B DNA MER1_type -2 335 1 527 304 126 34 chr10 2856052 2856435 -142732853 + L2 LINE L2 1520 1945 -1369 1464 237 62 27 chr10 2856435 2856886 -142732402 - MLT1C LTR MaLR 0 467 1 527 304 126 34 chr10 2856886 2856916 -142732372 + L2 LINE L2 1945 1971 -1343 861 234 7 57 chr10 2856920 2857202 -142732086 + MLT1B LTR MaLR 1 268 -122 302 277 66 7 chr10 2857202 2857339 -142731949 + L2 LINE L2 2332 2476 -838 1113 128 122 0 chr10 2857347 2857527 -142731761 - AluJb SINE Alu -25 287 86 339 330 130 15 chr10 2857628 2858021 -142731267 + L2 LINE L2 2622 3066 -247 2697 35 3 0 chr10 2860958 2861268 -142728020 - AluY SINE Alu 0 311 1 24 0 0 0 chr10 2861469 2861493 -142727795 + GC_rich Low_complexity Low_complexity 1 24 0 1622 205 76 12 chr10 2861921 2862331 -142726957 - L1MDa LINE L1 -4297 2243 1808 * 2579 275 182 17 chr10 2862322 2863316 -142725972 - L1MDa LINE L1 -5339 1201 44 867 198 11 84 chr10 2863351 2863614 -142725674 - MLT1A2 LTR MaLR 0 374 131 24 32 0 0 chr10 2863617 2863648 -142725640 + AT_rich Low_complexity Low_complexity 1 31 0 227 208 0 19 chr10 2864461 2864514 -142724774 + CT-rich Low_complexity Low_complexity 2 53 0 379 218 0 0 chr10 2865244 2865331 -142723957 - L1MA9 LINE L1 0 6312 6226 22 70 0 0 chr10 2865840 2865883 -142723405 + AT_rich Low_complexity Low_complexity 1 43 0 1829 122 0 0 chr10 2869305 2869552 -142719736 + AluSx SINE Alu 42 288 -24 1181 74 4 8 chr10 2869555 2869817 -142719471 + (GAAA)n Simple_repeat Simple_repeat 1 261 0 297 0 0 0 chr10 2870036 2870069 -142719219 + (TA)n Simple_repeat Simple_repeat 2 34 0 581 296 100 17 chr10 2871442 2871672 -142717616 - MIR SINE MIR -11 251 3 900 124 49 27 chr10 2973060 2973285 -142616003 + AluY SINE Alu 81 310 -1 180 111 0 0 chr10 2973829 2973856 -142615432 + (CATATA)n Simple_repeat Simple_repeat 2 28 0 2219 223 43 8 chr10 2975299 2975806 -142613482 - MER74A LTR ERVL 0 558 34 2050 98 3 57 chr10 2976176 2976492 -142612796 + AluSg SINE Alu 1 299 -11 4480 207 44 27 chr10 2977165 2977312 -142611976 - L1MB7 LINE L1 -9 6175 6032 2352 81 0 0 chr10 2977312 2977620 -142611668 + AluY SINE Alu 1 308 -3 4480 207 44 27 chr10 2977620 2979396 -142609892 - L1MB7 LINE L1 -152 6032 4219 343 308 39 0 chr10 2979411 2979541 -142609747 - MIR SINE MIR -6 256 122 875 240 56 65 chr10 2980549 2981078 -142608210 + MLT1E LTR MaLR 21 593 0 270 0 0 0 chr10 2981225 2981255 -142608033 + (A)n Simple_repeat Simple_repeat 1 30 0 234 263 0 0 chr10 2981575 2981632 -142607656 + (CA)n Simple_repeat Simple_repeat 1 57 0 297 276 162 17 chr10 2982130 2982278 -142607010 - MER5A DNA MER1_type -5 184 7 1211 223 51 3 chr10 2983487 2983662 -142605626 - AluJb SINE Alu -5 307 111 270 0 0 0 chr10 2983662 2983692 -142605596 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 1211 223 51 3 chr10 2983692 2983808 -142605480 - AluJb SINE Alu -201 111 2 1740 170 10 0 chr10 2984000 2984300 -142604988 - AluJo SINE Alu -9 303 1 867 157 4 6 chr10 2985162 2985883 -142603405 + (CTCA)n Simple_repeat Simple_repeat 1 720 0 922 163 3 12 chr10 2985903 2985940 -142603348 + (CTCA)n Simple_repeat Simple_repeat 1 37 -1675 6122 114 25 28 chr10 2985940 2986912 -142602376 + LTR5 LTR ERVK 1 969 0 922 163 3 12 chr10 2986912 2987631 -142601657 + (CTCA)n Simple_repeat Simple_repeat 37 1712 0 237 337 116 35 chr10 2987632 2988003 -142601285 - L2 LINE L2 -1 3312 2912 662 268 45 15 chr10 2988415 2988613 -142600675 + MER20 DNA MER1_type 16 219 0 1938 99 50 7 chr10 2988944 2989227 -142600061 - AluSx SINE Alu -17 295 1 3676 25 0 7 chr10 2989962 2990396 -142598892 - L1PA5 LINE L1 0 6154 5724 297 83 0 33 chr10 2990614 2990674 -142598614 - L1MA4A LINE L1 -1 6302 6245 227 231 46 0 chr10 2990683 2990748 -142598540 - L1MB4 LINE L1 -2 6178 6111 1293 219 77 41 chr10 2990782 2990901 -142598387 - L1MA4 LINE L1 -294 6006 5893 2055 98 3 7 chr10 2990901 2991198 -142598090 - AluSq SINE Alu -13 300 5 1293 219 77 41 chr10 2991198 2991466 -142597822 - L1MA4 LINE L1 -407 5893 5605 711 158 29 53 chr10 2991465 2991621 -142597667 - L1MA4 LINE L1 -44 6256 6105 * 215 211 21 42 chr10 2991624 2991719 -142597569 + (TTATA)n Simple_repeat Simple_repeat 2 94 0 1266 165 29 98 chr10 2991734 2992080 -142597208 - L1MA4 LINE L1 -192 6108 5787 484 194 43 0 chr10 2992080 2992187 -142597101 + L1ME LINE L1 5724 5834 -287 1446 152 115 0 chr10 2993502 2993771 -142595517 + AluSx SINE Alu 2 301 -11 590 132 0 0 chr10 2995245 2995336 -142593952 + AluY SINE Alu 219 309 -2 1785 175 62 73 chr10 2995363 2995802 -142593486 + Tigger2a DNA MER2_type 1 434 0 243 0 0 0 chr10 2996247 2996274 -142593014 + (CA)n Simple_repeat Simple_repeat 2 28 0 206 235 0 10 chr10 2996275 2996373 -142592915 + GA-rich Low_complexity Low_complexity 2 98 0 294 239 0 0 chr10 2996392 2996505 -142592783 + GA-rich Low_complexity Low_complexity 2 114 0 1809 196 38 30 chr10 2996950 2997082 -142592206 + MSTD LTR MaLR 1 130 -266 2302 93 0 3 chr10 2997082 2997394 -142591894 - AluY SINE Alu 0 311 1 1809 196 38 30 chr10 2997394 2997654 -142591634 + MSTD LTR MaLR 130 396 0 857 297 26 62 chr10 2998430 2998922 -142590366 + MLT1J LTR MaLR 1 511 0 234 263 53 13 chr10 2998994 2999070 -142590218 - MIR3 SINE MIR -23 185 107 1215 126 16 11 chr10 2999090 2999280 -142590008 - MER4C LTR ERV1 0 465 275 213 282 0 0 chr10 2999336 2999510 -142589778 + G-rich Low_complexity Low_complexity 5 178 0 1739 147 47 13 chr10 2999554 2999853 -142589435 - MER4C LTR ERV1 -156 309 1 2411 86 28 81 chr10 3000913 3001310 -142587978 + MER51B LTR ERV1 2 377 0 2266 83 3 10 chr10 3001340 3001653 -142587635 - AluY SINE Alu 0 311 1 592 137 11 11 chr10 3001884 3001979 -142587309 + AluSp/q SINE Alu 208 302 -11 2104 246 94 81 chr10 3002085 3002367 -142586921 + L1ME1 LINE L1 4693 4970 -1196 1187 55 0 22 chr10 3002367 3002548 -142586740 + (GAAA)n Simple_repeat Simple_repeat 4 180 0 2274 61 7 7 chr10 3002551 3002846 -142586442 + AluY SINE Alu 1 295 -16 2104 246 94 81 chr10 3002846 3003541 -142585747 + L1ME1 LINE L1 4971 5656 -510 1588 157 0 83 chr10 3003541 3003879 -142585409 + AluJo SINE Alu 3 312 0 2104 246 94 81 chr10 3003879 3003921 -142585367 + L1ME1 LINE L1 5656 5696 -470 4011 50 2 4 chr10 3003921 3004417 -142584871 - L1PA3 LINE L1 -1 6154 5660 2104 246 94 81 chr10 3004417 3004840 -142584448 + L1ME1 LINE L1 5696 6161 -5 1929 118 4 0 chr10 3005217 3005497 -142583791 - AluSq SINE Alu -32 281 1 1896 140 0 7 chr10 3006257 3006543 -142582745 + AluJo SINE Alu 3 286 -26 351 0 0 0 chr10 3006566 3006605 -142582683 + (TA)n Simple_repeat Simple_repeat 2 40 0 2051 136 0 0 chr10 3006605 3006906 -142582382 - AluSx SINE Alu -8 304 1 305 274 53 26 chr10 3007498 3007611 -142581677 + MER112 DNA MER1_type 87 202 -58 810 184 0 0 chr10 3009473 3009652 -142579636 + CT-rich Low_complexity Low_complexity 1 179 0 2005 147 0 28 chr10 3010987 3011307 -142577981 - AluSx SINE Alu -1 311 1 259 278 90 21 chr10 3011408 3011552 -142577736 + L1MEd LINE L1 5 158 -5961 271 280 99 56 chr10 3012115 3012347 -142576941 + L1ME LINE L1 5614 5855 -315 2166 115 3 16 chr10 3012613 3012926 -142576362 - AluSp SINE Alu -4 309 1 310 215 223 8 chr10 3012985 3013115 -142576173 - MER104 DNA Tc2 -5 175 18 1835 138 50 44 chr10 3013302 3013664 -142575624 - THE1B LTR MaLR 0 364 1 198 310 14 0 chr10 3014044 3014115 -142575173 - MIR SINE MIR -33 229 158 784 159 0 0 chr10 3015127 3015259 -142574029 + FLAM_C SINE Alu 1 132 -1 198 305 179 13 chr10 3016048 3016199 -142573089 - MIR SINE MIR -1 261 86 1559 173 41 11 chr10 3016285 3016425 -142572863 - AluJo SINE Alu -38 274 140 243 0 0 0 chr10 3016425 3016452 -142572836 + (TTA)n Simple_repeat Simple_repeat 2 28 0 1559 173 41 11 chr10 3016452 3016577 -142572711 - AluJo SINE Alu -172 140 1 207 0 0 0 chr10 3016896 3016919 -142572369 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 222 118 0 0 chr10 3016954 3016988 -142572300 + (T)n Simple_repeat Simple_repeat 1 34 0 186 277 84 0 chr10 3017412 3017495 -142571793 - MIR SINE MIR -113 149 60 197 304 51 0 chr10 3017528 3017607 -142571681 + L2 LINE L2 3179 3261 -11 1963 133 3 11 chr10 3019356 3019669 -142569619 - AluSx SINE Alu 0 311 1 181 219 94 0 chr10 3019917 3019981 -142569307 - L2 LINE L2 -516 2798 2729 183 80 0 0 chr10 3020010 3020035 -142569253 + (GGGGA)n Simple_repeat Simple_repeat 3 27 0 3420 114 8 4 chr10 3020347 3020856 -142568432 - MER9 LTR ERVK 0 511 1 225 196 0 0 chr10 3021076 3021122 -142568166 - Charlie5 DNA MER1_type -17 2595 2550 1825 169 3 10 chr10 3021149 3021451 -142567837 + AluJo SINE Alu 3 302 -10 1052 25 0 0 chr10 3021454 3021574 -142567714 + AluYb8 SINE Alu 199 318 0 293 262 79 0 chr10 3021599 3021725 -142567563 - Charlie5 DNA MER1_type -114 2498 2363 351 249 66 95 chr10 3021922 3022271 -142567017 + L2 LINE L2 2951 3289 -24 2523 76 0 19 chr10 3022777 3023092 -142566196 - AluSc SINE Alu 0 309 1 196 333 40 30 chr10 3024149 3024248 -142565040 + MIR SINE MIR 34 133 -129 227 216 162 0 chr10 3024496 3024570 -142564718 + MER5A DNA MER1_type 42 127 -62 2584 55 0 0 chr10 3024768 3025060 -142564228 - AluY SINE Alu -19 292 1 1290 266 130 40 chr10 3026306 3027163 -142562125 + L1ME1 LINE L1 5214 6150 -16 1542 109 0 0 chr10 3027420 3027622 -142561666 - AluY SINE Alu 0 311 110 1853 154 3 39 chr10 3029022 3029333 -142559955 + AluJb SINE Alu 1 300 -12 181 289 52 31 chr10 3034666 3034763 -142554525 + MIR SINE MIR 152 250 -12 427 263 143 19 chr10 3035660 3035869 -142553419 - MIR SINE MIR -19 243 9 21 36 0 0 chr10 3036355 3036383 -142552905 + AT_rich Low_complexity Low_complexity 1 28 0 1849 182 3 6 chr10 3036394 3036707 -142552581 - AluJo SINE Alu 0 312 1 1696 159 32 0 chr10 3040008 3040285 -142549003 + AluJo SINE Alu 16 301 -11 979 202 214 9 chr10 3040794 3041229 -142548059 + Tigger7 DNA MER2_type 1 2479 -8 738 148 42 7 chr10 3041401 3041543 -142547745 + AluJb SINE Alu 136 282 -30 222 128 0 0 chr10 3041561 3041600 -142547688 + (TAGG)n Simple_repeat Simple_repeat 1 39 0 2169 98 0 4 chr10 3044968 3045243 -142544045 - AluSc SINE Alu -35 274 1 337 276 45 45 chr10 3046349 3046505 -142542783 + L1M4 LINE L1 3691 3846 -2300 190 284 74 21 chr10 3047159 3047254 -142542034 + MIR3 SINE MIR 9 108 -100 2138 129 0 0 chr10 3047496 3047783 -142541505 + AluSx SINE Alu 1 287 -25 1301 176 38 31 chr10 3048152 3048413 -142540875 + Tigger7 DNA MER2_type 5 267 -466 316 261 11 11 chr10 3048410 3048502 -142540786 + Tigger7 DNA MER2_type 2388 2479 -8 * 242 240 0 0 chr10 3048865 3048915 -142540373 - L2 LINE L2 -2 3270 3221 2306 110 0 7 chr10 3049468 3049776 -142539512 + AluSx SINE Alu 1 306 -6 775 194 203 13 chr10 3049852 3050084 -142539204 - Tigger3(Golem) DNA MER2_type 0 3038 2763 36 62 0 0 chr10 3050101 3050165 -142539123 + AT_rich Low_complexity Low_complexity 1 64 0 289 159 286 0 chr10 3050181 3050244 -142539044 - Tigger3(Golem) DNA MER2_type -2947 82 2 2260 97 10 0 chr10 3050371 3050660 -142538628 + AluSg SINE Alu 2 293 -17 225 90 15 134 chr10 3052387 3052454 -142536834 + MLT1E2 LTR MaLR 2 60 -566 373 241 77 65 chr10 3052926 3053096 -142536192 + L2 LINE L2 3095 3266 -6 248 351 38 5 chr10 3056972 3057183 -142532105 + MER46C DNA MER2_type 121 338 0 417 295 74 0 chr10 3058247 3058437 -142530851 - MER20 DNA MER1_type 0 219 16 1868 161 3 19 chr10 3059110 3059427 -142529861 + AluJb SINE Alu 1 312 0 1094 161 0 0 chr10 3060408 3060576 -142528712 + AluJb SINE Alu 134 301 -11 2498 77 3 0 chr10 3061836 3062146 -142527142 - AluSx SINE Alu -1 311 1 530 154 11 0 chr10 3063173 3063264 -142526024 - AluSc SINE Alu -213 96 5 396 299 62 14 chr10 3065595 3065806 -142523482 + L2 LINE L2 2050 2270 -1044 440 297 175 25 chr10 3066294 3066648 -142522640 + L2 LINE L2 2396 2802 -512 207 271 66 74 chr10 3066907 3067005 -142522283 + L2 LINE L2 3182 3280 -33 2391 101 0 0 chr10 3067005 3067302 -142521986 + AluSx SINE Alu 1 297 -15 207 271 66 74 chr10 3067302 3067325 -142521963 + L2 LINE L2 3280 3302 -11 343 280 136 0 chr10 3067410 3067535 -142521753 + MIR SINE MIR 111 252 -10 1470 127 0 51 chr10 3068593 3068829 -142520459 + AluSx SINE Alu 7 230 -82 362 322 96 0 chr10 3069783 3069929 -142519359 + MIR SINE MIR 87 246 -16 368 309 3 3 chr10 3070096 3070469 -142518819 + (CA)n Simple_repeat Simple_repeat 1 373 0 275 258 12 12 chr10 3070487 3070650 -142518638 + (CA)n Simple_repeat Simple_repeat 2 164 0 261 219 0 0 chr10 3070740 3070813 -142518475 + (CA)n Simple_repeat Simple_repeat 2 74 0 2261 74 7 58 chr10 3070968 3071277 -142518011 + AluY SINE Alu 1 293 -18 250 339 17 17 chr10 3073245 3073363 -142515925 + MIR3 SINE MIR 86 203 -5 590 239 3 43 chr10 3074471 3074824 -142514464 + G-rich Low_complexity Low_complexity 1 338 0 222 301 0 46 chr10 3074836 3074989 -142514299 + (CTAGGG)n Simple_repeat Simple_repeat 1 146 0 218 295 0 39 chr10 3075491 3075569 -142513719 + G-rich Low_complexity Low_complexity 1 75 0 1581 160 82 7 chr10 3078419 3078701 -142510587 - AluJo SINE Alu -9 303 1 1910 92 0 82 chr10 3079369 3079672 -142509616 + AluSx SINE Alu 35 312 0 180 0 0 0 chr10 3080665 3080685 -142508603 + (T)n Simple_repeat Simple_repeat 1 20 0 308 64 21 0 chr10 3081463 3081510 -142507778 + (CA)n Simple_repeat Simple_repeat 1 48 0 2312 100 0 0 chr10 3082578 3082867 -142506421 - AluSg SINE Alu -21 289 1 28 0 0 0 chr10 3084297 3084325 -142504963 + GC_rich Low_complexity Low_complexity 1 28 0 216 170 0 0 chr10 3084373 3084426 -142504862 + G-rich Low_complexity Low_complexity 6 58 0 306 342 17 8 chr10 3086357 3086477 -142502811 + MIR SINE MIR 30 150 -112 189 263 105 75 chr10 3086562 3086695 -142502593 - MIR SINE MIR -55 207 71 197 319 71 26 chr10 3087275 3087388 -142501900 - L2 LINE L2 -36 3236 3119 181 320 39 0 chr10 3087511 3087589 -142501699 - MIR SINE MIR -130 132 52 453 309 17 33 chr10 3087603 3087784 -142501504 + MIR SINE MIR 58 235 -27 1662 102 26 4 chr10 3089548 3089774 -142499514 - AluSg/x SINE Alu -9 301 71 1956 182 5 16 chr10 3089812 3090181 -142499107 + MLT1A1 LTR MaLR 1 365 0 355 275 132 18 chr10 3090281 3090448 -142498840 + MER5A DNA MER1_type 1 186 -3 1007 218 34 103 chr10 3090970 3091350 -142497938 + MLT1J LTR MaLR 1 354 -157 187 405 56 8 chr10 3091419 3091545 -142497743 - L2 LINE L2 -25 3247 3116 1167 281 49 85 chr10 3091761 3092583 -142496705 + L1MC5 LINE L1 6730 7521 -440 24 32 0 0 chr10 3094557 3094588 -142494700 + AT_rich Low_complexity Low_complexity 1 31 0 335 327 65 0 chr10 3094657 3094871 -142494417 + L1MC/D LINE L1 5576 5803 -2005 1939 158 14 0 chr10 3095109 3095406 -142493882 + AluSx SINE Alu 1 301 -11 2300 110 7 0 chr10 3095795 3096096 -142493192 + AluSc SINE Alu 1 303 -6 983 243 156 30 chr10 3096584 3096885 -142492403 + MLT2C1 LTR ERVL 1 339 -58 377 70 18 0 chr10 3096885 3096942 -142492346 + (TCTA)n Simple_repeat Simple_repeat 4 61 0 709 265 12 0 chr10 3096944 3097114 -142492174 - ERVL LTR ERVL -5104 660 489 1707 253 48 14 chr10 3097137 3097290 -142491998 + ERVL-C1 LTR ERVL 252 398 -5366 2342 68 0 4 chr10 3097290 3097569 -142491719 - AluY SINE Alu -10 301 24 1707 253 48 14 chr10 3097569 3097854 -142491434 + ERVL-C1 LTR ERVL 398 705 -5059 331 352 31 48 chr10 3097965 3098317 -142490971 + ERVL LTR ERVL 4908 5253 -511 512 278 73 20 chr10 3098640 3098885 -142490403 + LTR16C LTR ERVL 232 489 -2 210 222 37 19 chr10 3099381 3099435 -142489853 - MIR SINE MIR -102 160 106 1895 146 0 0 chr10 3100680 3100948 -142488340 + AluSx SINE Alu 27 294 -18 205 132 57 19 chr10 3100980 3101033 -142488255 + T-rich Low_complexity Low_complexity 4 58 0 4352 96 3 0 chr10 3101054 3101670 -142487618 - L1PA10 LINE L1 -11 6157 5540 599 317 77 35 chr10 3102043 3102418 -142486870 - MLT1L LTR MaLR -224 391 1 2585 74 0 0 chr10 3102647 3102957 -142486331 - AluY SINE Alu -1 310 1 3512 211 45 22 chr10 3104181 3104530 -142484758 - L1MB3 LINE L1 -2 6181 5842 2640 52 0 3 chr10 3104530 3104838 -142484450 - AluY SINE Alu -4 307 1 3512 211 45 22 chr10 3104838 3105356 -142483932 - L1MB3 LINE L1 -341 5842 5294 1614 200 43 3 chr10 3105396 3105696 -142483592 + AluJo SINE Alu 1 312 0 2346 174 12 7 chr10 3105722 3106146 -142483142 + MSTB LTR MaLR 1 426 0 191 284 37 25 chr10 3106520 3106601 -142482687 - MIR SINE MIR -153 109 28 975 259 34 39 chr10 3106695 3107050 -142482238 - MLT2D LTR ERVL 0 414 62 316 309 32 42 chr10 3107402 3107619 -142481669 - L2 LINE L2 -5 3308 3094 239 93 481 0 chr10 3107741 3107795 -142481493 + MADE1 DNA Mariner 1 80 0 21 0 0 0 chr10 3108598 3108619 -142480669 + AT_rich Low_complexity Low_complexity 1 21 0 279 0 0 0 chr10 3109089 3109120 -142480168 + (GA)n Simple_repeat Simple_repeat 2 32 0 22 35 0 0 chr10 3109366 3109395 -142479893 + AT_rich Low_complexity Low_complexity 1 29 0 5599 140 32 1 chr10 3109543 3110720 -142478568 + L1PB2 LINE L1 4936 6149 -2 22 0 0 0 chr10 3110914 3110936 -142478352 + AT_rich Low_complexity Low_complexity 1 22 0 331 335 108 19 chr10 3111419 3111631 -142477657 - MIR SINE MIR -16 246 16 2183 105 0 7 chr10 3111679 3111983 -142477305 + AluSx SINE Alu 11 312 0 391 300 46 15 chr10 3112108 3112238 -142477050 + MIR SINE MIR 110 243 -19 23 0 0 0 chr10 3113048 3113071 -142476217 + AT_rich Low_complexity Low_complexity 1 23 0 2435 104 28 8 chr10 3113362 3113719 -142475569 - THE1B LTR MaLR 0 364 1 1501 179 42 28 chr10 3114991 3115348 -142473940 + L1MA4A LINE L1 5941 6302 -1 2451 51 0 0 chr10 3116302 3116598 -142472690 - AluY SINE Alu -7 304 9 560 291 86 42 chr10 3118029 3118438 -142470850 - MARNA DNA Mariner -134 452 26 2402 63 0 0 chr10 3119460 3119763 -142469525 + AluY SINE Alu 1 303 -8 408 252 26 43 chr10 3170472 3170587 -142418701 - L1MC4 LINE L1 -1340 6702 6590 300 271 83 10 chr10 3170511 3170607 -142418681 + L1MC3 LINE L1 6571 6673 -1112 * 1189 213 0 0 chr10 3171993 3172223 -142417065 - Tigger5 DNA MER2_type 0 2323 2094 1938 155 7 3 chr10 3173267 3173564 -142415724 - AluJo SINE Alu -14 298 1 498 226 88 13 chr10 3174264 3174412 -142414876 + MLT1B LTR MaLR 2 164 -226 1866 85 0 0 chr10 3174412 3174647 -142414641 + AluSc SINE Alu 67 301 -8 406 211 11 0 chr10 3174706 3174881 -142414407 + CT-rich Low_complexity Low_complexity 2 178 0 * 664 102 0 75 chr10 3174847 3175034 -142414254 + (TCTCTG)n Simple_repeat Simple_repeat 2 174 0 829 213 6 0 chr10 3175067 3175236 -142414052 + MLT1B LTR MaLR 205 374 -16 279 365 171 0 chr10 3176610 3176821 -142412467 + MIR SINE MIR 16 262 0 2472 96 0 6 chr10 3177147 3177459 -142411829 - AluSq SINE Alu 0 313 4 279 53 0 26 chr10 3177857 3177895 -142411393 - L2 LINE L2 -15 3298 3262 255 154 0 0 chr10 3177862 3177901 -142411387 - MIR SINE MIR -13 249 211 * 1355 37 0 0 chr10 3178093 3178255 -142411033 - L1PA5 LINE L1 -2 6152 5991 215 31 31 0 chr10 3180084 3180116 -142409172 + (TCTA)n Simple_repeat Simple_repeat 2 34 0 22 0 0 0 chr10 3180178 3180200 -142409088 + AT_rich Low_complexity Low_complexity 1 22 0 836 161 0 0 chr10 3180200 3180324 -142408964 - AluJb SINE Alu -188 124 1 813 158 68 6 chr10 3180327 3180504 -142408784 - L1MB3 LINE L1 -45 6138 5951 257 276 0 0 chr10 3181123 3181181 -142408107 + (CA)n Simple_repeat Simple_repeat 1 58 0 500 243 112 67 chr10 3181347 3181660 -142407628 + HAL1b LINE L1 554 880 -468 2193 112 0 10 chr10 3181683 3181995 -142407293 + AluSc SINE Alu 1 309 0 21 0 0 0 chr10 3182060 3182081 -142407207 + AT_rich Low_complexity Low_complexity 1 21 0 2330 110 0 3 chr10 3182089 3182397 -142406891 + AluSx SINE Alu 1 307 -5 1119 114 16 22 chr10 3182502 3182686 -142406602 - MER30B DNA MER1_type -7 183 1 1665 157 54 0 chr10 3183296 3183467 -142405821 - AluJb SINE Alu -4 308 115 266 0 0 29 chr10 3183467 3183502 -142405786 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 1665 157 54 0 chr10 3183502 3183610 -142405678 - AluJb SINE Alu -197 115 14 1260 94 0 0 chr10 3183830 3184122 -142405166 + (TCCA)n Simple_repeat Simple_repeat 1 292 0 1234 116 0 9 chr10 3184135 3184495 -142404793 + (TCCA)n Simple_repeat Simple_repeat 1 536 0 306 0 0 0 chr10 3184495 3184529 -142404759 + (TCTA)n Simple_repeat Simple_repeat 1 34 0 835 144 34 0 chr10 3184529 3184675 -142404613 - L1MA9 LINE L1 0 6312 6162 395 152 29 0 chr10 3186568 3186673 -142402615 + (CACCAT)n Simple_repeat Simple_repeat 3 110 0 274 212 25 0 chr10 3186725 3186843 -142402445 + (CACCAT)n Simple_repeat Simple_repeat 2 122 0 228 325 0 0 chr10 3186860 3186943 -142402345 + (CAT)n Simple_repeat Simple_repeat 2 84 0 738 123 9 0 chr10 3186943 3187057 -142402231 - THE1C LTR MaLR 0 375 261 465 174 26 19 chr10 3189265 3189420 -142399868 + (ATGGTG)n Simple_repeat Simple_repeat 4 159 0 367 255 0 22 chr10 3189470 3189577 -142399711 + (ATGGTG)n Simple_repeat Simple_repeat 1 109 -450 1807 133 63 84 chr10 3189577 3189959 -142399329 + THE1C LTR MaLR 2 375 0 367 255 0 22 chr10 3189959 3190042 -142399246 + (ATGGTG)n Simple_repeat Simple_repeat 109 559 0 274 212 25 0 chr10 3190059 3190177 -142399111 + (ATGGTG)n Simple_repeat Simple_repeat 2 122 0 395 152 29 0 chr10 3190229 3190334 -142398954 + (ATGGTG)n Simple_repeat Simple_repeat 3 110 0 189 297 78 0 chr10 3190900 3190964 -142398324 - MIR SINE MIR -96 166 98 32 26 0 0 chr10 3191209 3191248 -142398040 + AT_rich Low_complexity Low_complexity 1 39 0 2478 85 0 3 chr10 3191473 3191780 -142397508 + AluSx SINE Alu 1 306 -6 313 203 63 76 chr10 3192678 3192836 -142396452 - L1MC5 LINE L1 -48 7913 7758 2094 132 0 0 chr10 3193090 3193403 -142395885 + AluSx SINE Alu 1 313 0 231 271 0 17 chr10 3193560 3193619 -142395669 - L2 LINE L2 -2 3270 3213 211 312 104 24 chr10 3194904 3195029 -142394259 - L2 LINE L2 -41 3231 3097 256 324 128 0 chr10 3195066 3195168 -142394120 - MIR SINE MIR -74 188 74 303 296 55 78 chr10 3195927 3196184 -142393104 + L1ME4a LINE L1 5839 6089 -32 267 330 78 0 chr10 3197408 3197511 -142391777 - MIR3 SINE MIR -5 203 93 2180 100 4 0 chr10 3198959 3199240 -142390048 - AluSg SINE Alu -12 298 17 808 139 29 40 chr10 3199447 3199620 -142389668 + MER53 DNA DNA 1 171 -18 2254 86 38 3 chr10 3200227 3200519 -142388769 + AluY SINE Alu 1 302 -9 435 248 62 25 chr10 3200531 3200692 -142388596 - MER96B DNA MER1_type? -151 266 100 22 0 0 0 chr10 3202774 3202796 -142386492 + AT_rich Low_complexity Low_complexity 1 22 0 358 289 58 16 chr10 3203975 3204096 -142385192 - MIR SINE MIR -116 146 21 2307 89 7 3 chr10 3204580 3204873 -142384415 + AluSp SINE Alu 1 294 -19 302 304 9 18 chr10 3205602 3205714 -142383574 + (CA)n Simple_repeat Simple_repeat 2 112 0 510 168 23 12 chr10 3205966 3206139 -142383149 + (TG)n Simple_repeat Simple_repeat 1 175 0 499 151 29 17 chr10 3206192 3206364 -142382924 + (TG)n Simple_repeat Simple_repeat 1 174 0 616 167 27 6 chr10 3206436 3206774 -142382514 + (TG)n Simple_repeat Simple_repeat 1 345 0 1102 117 43 0 chr10 3207342 3207505 -142381783 + AluSc SINE Alu 129 298 -11 207 324 15 0 chr10 3209823 3209891 -142379397 + (TCCA)n Simple_repeat Simple_repeat 4 72 0 2219 121 0 0 chr10 3210741 3211038 -142378250 + AluSx SINE Alu 1 297 -15 1752 197 0 10 chr10 3211648 3211958 -142377330 + AluJb SINE Alu 1 307 -5 2219 71 0 17 chr10 3214303 3214599 -142374689 + AluY SINE Alu 7 297 -14 310 362 29 49 chr10 3215709 3215952 -142373336 - MIR SINE MIR -10 252 15 200 167 0 0 chr10 3217290 3217320 -142371968 + polypurine Low_complexity Low_complexity 3 32 0 327 272 76 11 chr10 3217493 3217585 -142371703 + MIR SINE MIR 13 110 -152 1467 181 38 2 chr10 3217628 3217999 -142371289 - MER65A LTR ERV1 0 445 4 217 323 15 0 chr10 3217999 3218064 -142371224 + MIR SINE MIR 162 227 -35 552 287 184 17 chr10 3218207 3218555 -142370733 + MLT1J LTR MaLR 104 509 -2 600 227 41 23 chr10 3218968 3219140 -142370148 + MER5B DNA MER1_type 1 175 -3 315 179 269 0 chr10 3219157 3219235 -142370053 + MER5A DNA MER1_type 8 106 -83 263 300 50 0 chr10 3220475 3220555 -142368733 - L2 LINE L2 0 3313 3230 2086 184 21 7 chr10 3220812 3221242 -142368046 + L1MB3 LINE L1 5746 6181 -2 203 77 0 26 chr10 3221285 3221324 -142367964 + (TTTAA)n Simple_repeat Simple_repeat 3 40 0 1508 149 3 73 chr10 3221327 3221629 -142367659 - AluJo SINE Alu -31 281 1 394 222 176 0 chr10 3221986 3222094 -142367194 - FLAM_C SINE Alu -1 132 6 215 31 31 0 chr10 3222594 3222626 -142366662 + (TGG)n Simple_repeat Simple_repeat 1 33 0 1848 137 7 3 chr10 3222992 3223284 -142366004 + AluSx SINE Alu 1 293 -19 247 224 60 30 chr10 3223673 3223740 -142365548 + L2 LINE L2 3204 3272 0 1333 235 30 12 chr10 3223848 3224197 -142365091 - MLT1A1 LTR MaLR -6 359 1 2117 107 3 0 chr10 3224271 3224560 -142364728 - AluSx SINE Alu -21 291 2 3259 103 50 57 chr10 3228478 3229078 -142360210 - MER4A LTR ERV1 0 600 5 583 111 0 0 chr10 3229774 3229864 -142359424 - HERVFH19I LTR ERV1 -3634 4085 3996 529 335 44 7 chr10 3229903 3230196 -142359092 - L2 LINE L2 -1226 2088 1785 278 213 50 106 chr10 3230206 3230366 -142358922 - MLT1J1 LTR MaLR -3 443 293 261 233 17 0 chr10 3230485 3230545 -142358743 - MLT1J2 LTR MaLR -321 129 69 1115 235 44 65 chr10 3230565 3231023 -142358265 + MLT2B1 LTR ERVL 2 458 -6 186 261 81 45 chr10 3231073 3231184 -142358104 - L2 LINE L2 -1559 1755 1641 194 311 126 24 chr10 3231216 3231422 -142357866 - L2 LINE L2 -1669 1645 1419 781 156 0 0 chr10 3231667 3231825 -142357463 - FRAM SINE Alu 0 183 26 284 250 60 24 chr10 3233343 3233427 -142355861 + MARNA DNA Mariner 44 130 -456 2034 103 21 0 chr10 3233479 3233760 -142355528 - AluSx SINE Alu -3 309 23 253 145 43 43 chr10 3233789 3233858 -142355430 - MARNA DNA Mariner -234 352 284 390 69 0 0 chr10 3233895 3233953 -142355335 + (TG)n Simple_repeat Simple_repeat 1 58 0 3062 217 63 25 chr10 3234558 3235640 -142353648 + L1MD2 LINE L1 4906 6032 -327 1564 245 24 37 chr10 3235647 3236112 -142353176 - MLT1C LTR MaLR -1 466 8 525 261 20 7 chr10 3236216 3236369 -142352919 + L1MD2 LINE L1 6195 6349 -10 196 236 36 18 chr10 3238495 3238550 -142350738 - L2 LINE L2 -11 3302 3247 783 134 7 13 chr10 3238714 3238863 -142350425 + (TTCC)n Simple_repeat Simple_repeat 1 148 0 1544 168 13 42 chr10 3238863 3239173 -142350115 - AluJo SINE Alu -5 307 7 1014 106 99 0 chr10 3239199 3239350 -142349938 + AluSg/x SINE Alu 135 300 -12 588 309 55 4 chr10 3239827 3240063 -142349225 - MLT1H LTR MaLR -222 327 80 192 266 0 119 chr10 3240141 3240250 -142349038 - MIR SINE MIR -79 183 88 21 36 0 0 chr10 3240570 3240598 -142348690 + AT_rich Low_complexity Low_complexity 1 28 0 2053 122 3 0 chr10 3240599 3240895 -142348393 + AluSq SINE Alu 1 297 -16 350 324 19 69 chr10 3241036 3241252 -142348036 + L1ME LINE L1 5264 5468 -2340 275 277 99 45 chr10 3243358 3243560 -142345728 - MER112 DNA MER1_type -6 254 42 1856 160 0 6 chr10 3243659 3243971 -142345317 + AluSx SINE Alu 1 310 -2 38 22 0 0 chr10 3243992 3244037 -142345251 + AT_rich Low_complexity Low_complexity 1 45 0 245 164 0 18 chr10 3244092 3244147 -142345141 + CT-rich Low_complexity Low_complexity 3 56 0 26 0 0 0 chr10 3244152 3244178 -142345110 + AT_rich Low_complexity Low_complexity 1 26 0 243 222 173 49 chr10 3246051 3246132 -142343156 - MIR SINE MIR -48 214 124 2100 103 0 7 chr10 3246134 3246446 -142342842 + AluSx SINE Alu 1 310 0 2142 82 3 7 chr10 3249278 3249569 -142339719 - AluY SINE Alu -21 290 1 924 200 44 9 chr10 3249570 3249795 -142339493 + AluJo SINE Alu 59 291 -21 409 238 153 26 chr10 3249830 3250019 -142339269 + L1ME LINE L1 5573 5785 -336 585 163 65 8 chr10 3250632 3250755 -142338533 + FLAM_C SINE Alu 2 131 -12 320 203 27 0 chr10 3250763 3250837 -142338451 - L1MC2 LINE L1 -4 6340 6265 420 111 0 0 chr10 3251292 3251355 -142337933 + (TG)n Simple_repeat Simple_repeat 1 63 0 819 278 14 0 chr10 3252509 3252732 -142336556 + MLT1B LTR MaLR 8 233 -157 264 263 11 63 chr10 3252836 3252931 -142336357 - MER45A DNA AcHobo -50 128 39 819 207 6 11 chr10 3252957 3253131 -142336157 - AluJb SINE Alu 0 312 140 492 336 77 17 chr10 3253141 3253654 -142335634 + L2 LINE L2 2694 3305 -8 436 316 123 0 chr10 3254939 3254969 -142334319 + MIR SINE MIR 6 31 -231 2188 99 17 3 chr10 3254969 3255271 -142334017 + AluSg SINE Alu 1 306 -4 436 316 123 0 chr10 3255271 3255411 -142333877 + MIR SINE MIR 31 197 -65 281 243 9 75 chr10 3255776 3255883 -142333405 - MIR SINE MIR -55 207 108 279 0 0 0 chr10 3256055 3256086 -142333202 + (TG)n Simple_repeat Simple_repeat 1 31 0 189 0 0 0 chr10 3256497 3256518 -142332770 + (T)n Simple_repeat Simple_repeat 1 21 0 1882 133 0 13 chr10 3258239 3258548 -142330740 + AluSx SINE Alu 1 305 -7 1810 120 31 47 chr10 3259656 3259973 -142329315 - AluSx SINE Alu 0 312 1 698 223 171 0 chr10 3260208 3260401 -142328887 + L1PA16 LINE L1 5930 6155 -11 2086 159 48 17 chr10 3260445 3260860 -142328428 + MSTA LTR MaLR 1 428 0 1588 154 41 20 chr10 3261214 3261324 -142327964 + AluJo SINE Alu 1 107 -205 279 0 0 0 chr10 3261324 3261355 -142327933 + (CAA)n Simple_repeat Simple_repeat 3 33 0 1588 154 41 20 chr10 3261355 3261536 -142327752 + AluJo SINE Alu 107 298 -14 595 245 74 25 chr10 3262065 3262228 -142327060 - MIR SINE MIR -21 241 71 431 358 46 30 chr10 3262879 3263251 -142326037 + L1ME3A LINE L1 5558 5935 -235 2139 97 3 7 chr10 3264692 3264990 -142324298 - AluSx SINE Alu -15 297 1 1739 189 63 5 chr10 3265175 3265617 -142323671 + MLT2B1 LTR ERVL 3 520 0 300 219 183 29 chr10 3265724 3265861 -142323427 - L1MDb LINE L1 -4853 1689 1532 335 269 25 52 chr10 3265879 3265981 -142323307 - L1MDb LINE L1 -5089 1533 1430 2240 91 0 3 chr10 3265981 3266278 -142323010 - AluSc SINE Alu -13 296 1 335 269 25 52 chr10 3266278 3266355 -142322933 - L1MDb LINE L1 -5192 1430 1290 1872 184 26 13 chr10 3266997 3267382 -142321906 - MLT1B LTR MaLR 0 390 1 192 40 0 0 chr10 3267480 3267505 -142321783 + (TG)n Simple_repeat Simple_repeat 2 26 0 228 286 26 0 chr10 3268093 3268170 -142321118 + GA-rich Low_complexity Low_complexity 1 79 0 24 0 0 0 chr10 3269390 3269414 -142319874 + AT_rich Low_complexity Low_complexity 1 24 0 226 316 144 22 chr10 3270179 3270318 -142318970 + L2 LINE L2 3115 3270 -2 270 290 0 0 chr10 3270437 3270499 -142318789 - L2 LINE L2 -3 3310 3249 274 325 34 72 chr10 3270514 3270779 -142318509 - L2 LINE L2 -1407 1907 1653 1545 179 7 39 chr10 3270893 3271201 -142318087 - AluJo SINE Alu -14 298 1 296 364 125 32 chr10 3271417 3272010 -142317278 - L2 LINE L2 -2212 1102 455 377 227 68 0 chr10 3272038 3272126 -142317162 + MLT1A2 LTR MaLR 1 94 -280 1418 231 76 32 chr10 3272131 3272537 -142316751 + MER70A LTR ERVL 13 436 -36 417 202 11 11 chr10 3272775 3272864 -142316424 + MLT1A2 LTR MaLR 80 168 -206 2140 98 3 20 chr10 3272864 3273170 -142316118 + AluSx SINE Alu 1 301 -11 372 211 0 0 chr10 3273211 3273282 -142316006 + MLT1A2 LTR MaLR 285 355 -35 855 322 80 19 chr10 3274671 3275044 -142314244 + L2 LINE L2 2918 3313 0 276 284 102 24 chr10 3275097 3275224 -142314064 - MIR SINE MIR -74 188 52 209 221 34 0 chr10 3276334 3276456 -142312832 + CT-rich Low_complexity Low_complexity 1 126 0 226 301 72 0 chr10 3276547 3276630 -142312658 - Charlie1 DNA MER1_type -317 2444 2356 675 231 18 96 chr10 3276940 3277222 -142312066 + L1MD3 LINE L1 7035 7294 -701 243 224 0 79 chr10 3277236 3277312 -142311976 + MLT1F1 LTR MaLR 34 103 -464 608 231 62 0 chr10 3278693 3278853 -142310435 + L1MD3 LINE L1 7739 7908 -87 1190 101 0 0 chr10 3278882 3279050 -142310238 - AluY SINE Alu -9 302 135 251 167 45 15 chr10 3279051 3279117 -142310171 + L1MD3 LINE L1 7928 7995 0 183 269 185 0 chr10 3279282 3279390 -142309898 + MIR SINE MIR 91 218 -44 27 81 0 0 chr10 3280048 3280110 -142309178 + AT_rich Low_complexity Low_complexity 1 62 0 1549 173 13 26 chr10 3280162 3280468 -142308820 - AluJb SINE Alu -8 304 3 1813 125 7 27 chr10 3280779 3281075 -142308213 + AluSx SINE Alu 1 290 -22 4706 132 53 74 chr10 3282155 3283755 -142305533 - pTR5 LTR ERV1 -9 2429 63 268 313 61 30 chr10 3284834 3284965 -142304323 - Charlie8 DNA MER1_type -2274 143 9 2207 162 37 29 chr10 3284969 3285513 -142303775 + MLT2A2 LTR ERVL 1 554 0 1848 192 48 22 chr10 3285813 3286229 -142303059 + MSTC LTR MaLR 2 428 0 385 311 27 0 chr10 3286278 3286426 -142302862 + MER63A DNA MER1_type 51 202 -8 2296 68 7 7 chr10 3286575 3286884 -142302404 + AluSx SINE Alu 1 309 -3 562 203 101 34 chr10 3286937 3287085 -142302203 + MLT1C LTR MaLR 18 175 -292 1549 170 3 42 chr10 3288611 3288922 -142300366 - AluJb SINE Alu -11 301 3 1092 171 89 20 chr10 3289133 3289379 -142299909 + L1MA5 LINE L1 6038 6300 0 3318 236 75 35 chr10 3289382 3289603 -142299685 - L1MD2 LINE L1 -14 6345 6134 234 0 0 0 chr10 3289603 3289629 -142299659 + (TG)n Simple_repeat Simple_repeat 2 27 0 3318 236 75 35 chr10 3289629 3290738 -142298550 - L1MD2 LINE L1 -225 6134 4975 2335 162 2 2 chr10 3290832 3291240 -142298048 - L1MB3 LINE L1 -9 6174 5767 601 194 0 0 chr10 3291245 3291343 -142297945 + L1MB3 LINE L1 5652 5749 -422 1072 295 50 14 chr10 3291357 3291774 -142297514 - L1MD2 LINE L1 -1234 4912 4481 439 286 9 0 chr10 3291887 3291999 -142297289 - MER63A DNA MER1_type 0 210 98 423 175 35 9 chr10 3292062 3292176 -142297112 + CT-rich Low_complexity Low_complexity 1 117 0 1039 222 63 11 chr10 3292296 3292580 -142296708 + L1MA4 LINE L1 5999 6297 -3 203 387 50 0 chr10 3293710 3293829 -142295459 + L3b LINE CR1 1232 1356 -227 266 286 0 14 chr10 3294034 3294104 -142295184 + L3 LINE CR1 1504 1572 -5 1209 70 41 0 chr10 3295660 3295832 -142293456 - AluY SINE Alu 0 311 133 304 316 15 52 chr10 3296313 3296449 -142292839 - MIR SINE MIR -14 248 118 2962 187 25 33 chr10 3296455 3297098 -142292190 - LTR48B LTR ERV1 -3 641 4 1999 143 0 0 chr10 3297421 3297721 -142291567 - AluSx SINE Alu -12 300 1 208 283 0 33 chr10 3298368 3298428 -142290860 + CT-rich Low_complexity Low_complexity 3 60 0 240 295 85 16 chr10 3299733 3299862 -142289426 + MER45A DNA AcHobo 40 177 -1 190 370 54 0 chr10 3300068 3300160 -142289128 - MIR SINE MIR -123 139 43 1256 171 40 5 chr10 3300671 3300893 -142288395 + MER30 DNA MER1_type 1 230 0 1869 102 0 11 chr10 3301464 3301728 -142287560 - AluSq SINE Alu -52 261 1 349 233 33 0 chr10 3302191 3302281 -142287007 - MER103 DNA DNA -8 158 66 715 274 33 12 chr10 3302285 3302530 -142286758 - Charlie5 DNA MER1_type -28 2584 2335 245 192 0 3 chr10 3302544 3302637 -142286651 - AluY SINE Alu -177 125 1 1418 203 24 100 chr10 3304673 3305092 -142284196 + L1MB3 LINE L1 5364 5750 -421 1085 183 10 0 chr10 3305094 3305302 -142283986 + L1MB3 LINE L1 5973 6182 -1 191 283 50 17 chr10 3305467 3305527 -142283761 - L3 LINE CR1 -478 1099 1038 313 333 7 35 chr10 3305802 3305943 -142283345 - MIR3 SINE MIR -32 176 40 306 0 0 0 chr10 3306477 3306511 -142282777 + (CA)n Simple_repeat Simple_repeat 1 34 0 1349 215 20 27 chr10 3306689 3306987 -142282301 + AluJo SINE Alu 1 296 -6 36 40 0 0 chr10 3307012 3307062 -142282226 + AT_rich Low_complexity Low_complexity 1 50 0 2466 43 3 0 chr10 3307134 3307436 -142281852 + AluY SINE Alu 1 303 -8 1638 204 95 16 chr10 3308127 3308558 -142280730 + MER31B LTR ERV1 2 466 0 258 313 67 33 chr10 3308695 3308845 -142280443 - L2 LINE L2 -923 2391 2237 1799 239 25 15 chr10 3308959 3309431 -142279857 - MER90 LTR ERV1 -68 546 70 2058 115 13 10 chr10 3309598 3309902 -142279386 + AluSq SINE Alu 1 305 -8 21 0 0 0 chr10 3312642 3312663 -142276625 + AT_rich Low_complexity Low_complexity 1 21 0 1919 125 10 7 chr10 3313137 3313432 -142275856 + AluSx SINE Alu 1 296 -16 202 219 0 0 chr10 3313514 3313555 -142275733 - MIR3 SINE MIR -26 182 142 206 255 0 0 chr10 3314776 3314827 -142274461 + (TAAA)n Simple_repeat Simple_repeat 3 53 0 247 292 26 62 chr10 3315361 3315474 -142273814 + MIR SINE MIR 33 141 -67 341 203 123 88 chr10 3315662 3315720 -142273568 - ORSL DNA AcHobo -28 247 193 1859 129 0 0 chr10 3315720 3315983 -142273305 - AluSg SINE Alu -5 305 43 341 203 123 88 chr10 3315983 3316151 -142273137 - ORSL DNA AcHobo -82 193 13 188 283 0 0 chr10 3316190 3316250 -142273038 - L2 LINE L2 -58 3255 3196 3852 194 27 17 chr10 3316926 3317750 -142271538 - L1MB3 LINE L1 -1 6182 5351 2779 97 5 0 chr10 3317845 3318218 -142271070 + THE1C LTR MaLR 1 375 0 223 290 65 32 chr10 3318419 3318512 -142270776 - MIR3 SINE MIR -110 98 3 426 195 18 9 chr10 3319711 3319824 -142269464 + CT-rich Low_complexity Low_complexity 1 114 0 207 100 0 0 chr10 3319843 3319873 -142269415 + (TTCC)n Simple_repeat Simple_repeat 4 33 0 210 369 9 27 chr10 3320473 3320584 -142268704 - MIR3 SINE MIR -93 115 7 2051 136 147 8 chr10 3321171 3321545 -142267743 - MSTA LTR MaLR -2 426 1 1309 214 79 25 chr10 3321819 3322175 -142267113 + MER74A LTR ERVL 151 525 -33 252 0 0 0 chr10 3322426 3322454 -142266834 + (TTTA)n Simple_repeat Simple_repeat 4 31 0 1789 159 3 29 chr10 3322650 3322959 -142266329 - AluJo SINE Alu -11 301 1 2637 106 0 8 chr10 3324207 3324574 -142264714 + THE1B LTR MaLR 1 364 0 3068 171 147 71 chr10 3324576 3325350 -142263938 + THE1B-int LTR MaLR 3 835 -816 1026 116 0 14 chr10 3325350 3325496 -142263792 + THE1B LTR MaLR 221 364 0 1572 205 61 23 chr10 3326905 3327334 -142261954 - Charlie1b DNA MER1_type 0 523 79 2314 99 0 3 chr10 3327595 3327889 -142261399 - AluSq SINE Alu -20 293 1 55 65 0 43 chr10 3330475 3330660 -142258628 + AT_rich Low_complexity Low_complexity 1 177 0 22 0 0 0 chr10 3330699 3330721 -142258567 + AT_rich Low_complexity Low_complexity 1 22 0 1992 124 7 3 chr10 3330819 3331138 -142258150 - AluSx SINE Alu 0 320 1 384 244 23 74 chr10 3332016 3332192 -142257096 + MER5A DNA MER1_type 14 180 -9 539 190 84 39 chr10 3332375 3332554 -142256734 - MER5A DNA MER1_type -2 187 1 2310 112 0 6 chr10 3332982 3333296 -142255992 + AluSq SINE Alu 1 312 -1 21 0 0 0 chr10 3333627 3333648 -142255640 + AT_rich Low_complexity Low_complexity 1 21 0 1327 145 30 98 chr10 3333794 3334131 -142255157 - L1MB8 LINE L1 -4 6174 5861 1276 225 39 0 chr10 3334133 3334440 -142254848 - L1MC3 LINE L1 0 7785 7467 1199 174 9 0 chr10 3334452 3334671 -142254617 - L1MA8 LINE L1 -1 6290 6070 2108 195 49 117 chr10 3334811 3335149 -142254139 - LTR8A LTR ERV1 0 727 464 3241 77 9 2 chr10 3335149 3335577 -142253711 + L1PA7 LINE L1 5722 6152 -2 2108 195 49 117 chr10 3335577 3335976 -142253312 - LTR8A LTR ERV1 -263 464 40 247 289 96 7 chr10 3337134 3337269 -142252019 + MIR3 SINE MIR 44 190 -18 323 183 12 0 chr10 3339137 3339219 -142250069 + CT-rich Low_complexity Low_complexity 2 84 0 299 221 206 29 chr10 3339661 3339797 -142249491 + Ricksha DNA DNA 136 295 -959 * 844 175 0 7 chr10 3339787 3339941 -142249347 + Ricksha DNA DNA 1692 1844 -1402 2915 218 30 21 chr10 3339989 3340649 -142248639 + Ricksha DNA DNA 1819 2484 -762 * 3401 209 56 27 chr10 3340632 3341524 -142247764 + Ricksha DNA DNA 2318 3235 -11 293 109 18 0 chr10 3341580 3341635 -142247653 + (CA)n Simple_repeat Simple_repeat 1 56 0 263 226 75 21 chr10 3341690 3341783 -142247505 + MER45A DNA AcHobo 80 177 -1 261 0 0 0 chr10 3343878 3343907 -142245381 + (T)n Simple_repeat Simple_repeat 1 29 0 2024 128 3 13 chr10 3344466 3344772 -142244516 + AluSx SINE Alu 1 303 -9 1576 192 78 19 chr10 3345087 3345457 -142243831 + MSTD LTR MaLR 1 392 -4 516 156 0 0 chr10 3345503 3345593 -142243695 + GA-rich Low_complexity Low_complexity 3 92 0 583 170 6 33 chr10 3345724 3345906 -142243382 + GA-rich Low_complexity Low_complexity 2 178 0 2280 209 20 8 chr10 3346263 3346757 -142242531 + L1MB8 LINE L1 5505 6004 -174 315 267 72 44 chr10 3346766 3346946 -142242342 - LTR16B LTR ERVL -160 304 120 445 145 0 0 chr10 3347513 3347582 -142241706 - L1PB1 LINE L1 -249 5902 5834 1556 120 8 4 chr10 3347582 3347817 -142241471 + L1PB1 LINE L1 5908 6149 -2 385 223 36 36 chr10 3348253 3348365 -142240923 - MER69 DNA AcHobo -2414 112 1 3279 233 33 20 chr10 3348824 3348949 -142240339 + L1ME1 LINE L1 5158 5280 -886 180 77 0 0 chr10 3348949 3348975 -142240313 + (CA)n Simple_repeat Simple_repeat 2 27 0 3279 233 33 20 chr10 3348975 3349789 -142239499 + L1ME1 LINE L1 5280 6110 -56 2163 114 3 22 chr10 3351041 3351356 -142237932 + AluSg SINE Alu 1 309 -1 615 247 57 98 chr10 3351466 3352009 -142237279 + L1MC5 LINE L1 7391 7911 -50 265 383 8 8 chr10 3352110 3352238 -142237050 + MIR SINE MIR 19 146 -116 1209 238 57 25 chr10 3352662 3353015 -142236273 - MLT1A1 LTR MaLR 0 365 2 342 61 0 0 chr10 3353234 3353283 -142236005 + (CA)n Simple_repeat Simple_repeat 2 50 0 284 369 17 0 chr10 3354903 3355029 -142234259 + MIR SINE MIR 37 162 -65 621 72 0 0 chr10 3355060 3355143 -142234145 + (GGAA)n Simple_repeat Simple_repeat 2 84 0 320 182 55 9 chr10 3355154 3355264 -142234024 + GA-rich Low_complexity Low_complexity 3 117 0 276 30 0 0 chr10 3357065 3357098 -142232190 + (CA)n Simple_repeat Simple_repeat 2 34 0 2883 146 8 22 chr10 3357355 3357854 -142231434 + L1MA8 LINE L1 5629 6120 -171 995 261 35 17 chr10 3358205 3358492 -142230796 - MLT1E LTR MaLR 0 593 302 246 371 59 6 chr10 3359859 3360029 -142229259 - MIR SINE MIR -57 205 27 457 271 66 7 chr10 3360426 3360577 -142228711 + MLT1A2 LTR MaLR 1 160 -214 273 200 93 7 chr10 3360720 3360863 -142228425 + MLT1B LTR MaLR 16 179 -211 395 149 14 0 chr10 3360885 3360959 -142228329 + CT-rich Low_complexity Low_complexity 1 75 0 749 245 7 4 chr10 3360982 3361179 -142228109 + MLT1B LTR MaLR 173 383 -7 423 288 16 8 chr10 3361232 3361357 -142227931 + L2 LINE L2 3141 3266 -6 205 319 26 35 chr10 3361415 3361528 -142227760 - MIR SINE MIR -62 146 35 1954 110 37 0 chr10 3362381 3362684 -142226604 - AluSx SINE Alu 0 313 1 254 281 31 0 chr10 3362857 3362953 -142226335 - MER5A DNA MER1_type -6 183 85 219 204 0 0 chr10 3363208 3363257 -142226031 + (TG)n Simple_repeat Simple_repeat 1 49 0 645 196 0 33 chr10 3363268 3363452 -142225836 + (TG)n Simple_repeat Simple_repeat 2 179 0 2170 100 4 0 chr10 3364523 3364804 -142224484 + AluSq SINE Alu 1 282 -31 210 71 0 0 chr10 3364809 3364837 -142224451 + (GGGGA)n Simple_repeat Simple_repeat 5 32 0 1476 191 32 45 chr10 3365377 3365755 -142223533 - MER93b LTR ERV1 0 373 1 1287 210 34 92 chr10 3367793 3368004 -142221284 - MER57A LTR ERV1 -1 402 225 2133 115 0 0 chr10 3368004 3368308 -142220980 - AluSx SINE Alu -8 304 1 1287 210 34 92 chr10 3368308 3368510 -142220778 - MER57A LTR ERV1 -178 225 13 26 0 0 0 chr10 3368919 3368945 -142220343 + AT_rich Low_complexity Low_complexity 1 26 0 297 287 128 14 chr10 3369013 3369200 -142220088 - MIR SINE MIR -46 216 17 263 233 0 58 chr10 3369743 3369829 -142219459 + LTR29 LTR ERV1 1 81 -541 * 1430 210 98 36 chr10 3369820 3370239 -142219049 + MER39 LTR ERV1 260 704 -3 262 339 64 35 chr10 3370258 3370429 -142218859 - MIR SINE MIR -31 231 56 228 67 0 0 chr10 3372419 3372449 -142216839 + (GGA)n Simple_repeat Simple_repeat 1 30 0 266 280 13 0 chr10 3373343 3373418 -142215870 + (CA)n Simple_repeat Simple_repeat 1 76 0 1306 194 36 12 chr10 3373833 3373986 -142215302 + MLT1A1 LTR MaLR 1 165 -200 2210 85 0 0 chr10 3373986 3374287 -142215001 + AluY SINE Alu 1 301 0 1306 194 36 12 chr10 3374287 3374384 -142214904 + MLT1A1 LTR MaLR 165 258 -107 784 134 0 0 chr10 3374519 3374631 -142214657 + MLT1A1 LTR MaLR 254 365 0 305 315 91 17 chr10 3376490 3376731 -142212557 + LTR16B LTR ERVL 194 452 -12 1800 159 0 3 chr10 3376799 3377095 -142212193 + AluJo SINE Alu 1 295 -17 1950 104 11 0 chr10 3377242 3377563 -142211725 + AluSp SINE Alu 1 313 0 1416 233 29 11 chr10 3377721 3378103 -142211185 + MLT1B LTR MaLR 1 389 -1 1156 246 81 0 chr10 3379049 3379382 -142209906 - MLT1B LTR MaLR -24 366 7 27 73 0 0 chr10 3380739 3380794 -142208494 + AT_rich Low_complexity Low_complexity 1 55 0 270 81 0 0 chr10 3381688 3381725 -142207563 + (T)n Simple_repeat Simple_repeat 1 37 0 309 269 46 9 chr10 3381863 3381971 -142207317 - MER5A DNA MER1_type -77 112 1 204 298 0 0 chr10 3382187 3382244 -142207044 + MIR SINE MIR 20 76 -186 264 112 73 47 chr10 3382497 3382733 -142206555 + (TAGA)n Simple_repeat Simple_repeat 1 242 0 299 322 35 53 chr10 3384251 3384422 -142204866 + MIR SINE MIR 25 192 -70 2155 94 10 0 chr10 3385799 3386098 -142203190 - AluSg SINE Alu -8 302 1 21 0 0 0 chr10 3388543 3388564 -142200724 + AT_rich Low_complexity Low_complexity 1 21 0 246 271 0 17 chr10 3388740 3388799 -142200489 - MIR SINE MIR -88 174 117 1910 167 7 66 chr10 3390778 3391186 -142198102 + MLT1B LTR MaLR 1 384 -6 2154 108 7 7 chr10 3391427 3391732 -142197556 - AluSx SINE Alu -7 305 1 297 292 42 0 chr10 3391743 3391839 -142197449 + LTR67 LTR ERVL 458 557 0 2614 147 36 74 chr10 3391985 3392367 -142196921 + LTR26B LTR ERV1 1 359 -172 1894 123 14 0 chr10 3392367 3392670 -142196618 + AluSx SINE Alu 1 307 0 2614 147 36 74 chr10 3392670 3392836 -142196452 + LTR26B LTR ERV1 359 530 -1 330 316 83 26 chr10 3393732 3393925 -142195363 + MIR SINE MIR 24 227 -35 270 0 0 0 chr10 3395963 3395993 -142193295 + (TC)n Simple_repeat Simple_repeat 1 30 0 207 0 0 0 chr10 3395992 3396015 -142193273 + (CA)n Simple_repeat Simple_repeat 1 23 0 * 234 300 0 25 chr10 3396053 3396133 -142193155 + MIR SINE MIR 166 243 -19 267 103 0 0 chr10 3396141 3396180 -142193108 + (TG)n Simple_repeat Simple_repeat 2 40 0 1907 119 20 0 chr10 3396549 3396842 -142192446 - AluSx SINE Alu -13 299 1 1788 94 11 34 chr10 3397535 3397800 -142191488 - AluSg SINE Alu -16 294 36 3004 198 57 58 chr10 3398340 3399185 -142190103 + L1MB8 LINE L1 5335 6178 0 573 42 0 0 chr10 3400241 3400313 -142188975 + (TC)n Simple_repeat Simple_repeat 1 72 0 1912 179 40 71 chr10 3401054 3401367 -142187921 - MLT1D LTR MaLR -3 502 209 2107 42 4 11 chr10 3401367 3401651 -142187637 - AluY SINE Alu 0 300 19 1912 179 40 71 chr10 3401651 3401854 -142187434 - MLT1D LTR MaLR -296 209 1 274 278 119 61 chr10 3401856 3402133 -142187155 + L1ME4a LINE L1 5501 5801 -320 1674 240 87 23 chr10 3402133 3402662 -142186626 - MLT1F1 LTR MaLR 0 567 5 274 278 119 61 chr10 3402662 3402779 -142186509 + L1ME4a LINE L1 5801 5910 -211 730 266 22 3 chr10 3402982 3403168 -142186120 + MIR SINE MIR 1 190 -18 308 352 72 0 chr10 3403142 3403267 -142186021 - MER5B DNA MER1_type -44 134 1 * 2587 36 0 0 chr10 3403518 3403821 -142185467 + AluYa5 SINE Alu 1 303 -8 371 180 0 90 chr10 3404354 3404443 -142184845 - MIR3 SINE MIR -2 206 126 1276 198 36 71 chr10 3404828 3405136 -142184152 - AluSx SINE Alu -5 297 1 4271 192 23 9 chr10 3405144 3406019 -142183269 - L1MC3 LINE L1 -3 7782 5444 232 69 0 0 chr10 3406553 3406582 -142182706 - MER4B LTR ERV1 0 610 582 4144 107 0 88 chr10 3406588 3407316 -142181972 - MER4A LTR ERV1 0 664 1 253 277 130 48 chr10 3407614 3407816 -142181472 - MIR SINE MIR -11 251 17 29 0 0 0 chr10 3407816 3407845 -142181443 + AT_rich Low_complexity Low_complexity 1 29 0 304 247 88 71 chr10 3409296 3409466 -142179822 - LTR48 LTR ERV1 -2 785 613 515 207 41 130 chr10 3409587 3409833 -142179455 - MER34C LTR ERV1 -321 264 41 2427 80 0 3 chr10 3409922 3410233 -142179055 + AluSx SINE Alu 3 312 0 303 288 120 33 chr10 3410843 3411027 -142178261 - MIR SINE MIR 0 262 63 25 0 0 0 chr10 3411044 3411069 -142178219 + AT_rich Low_complexity Low_complexity 1 25 0 7503 199 15 21 chr10 3411084 3413632 -142175656 - L1MA10 LINE L1 0 6334 3800 230 203 0 17 chr10 3413700 3413759 -142175529 + CT-rich Low_complexity Low_complexity 3 60 0 218 105 26 0 chr10 3415862 3415900 -142173388 + (TTA)n Simple_repeat Simple_repeat 1 39 0 333 308 56 43 chr10 3416483 3416805 -142172483 + MER46C DNA MER2_type 11 336 -2 2281 116 6 0 chr10 3417047 3417358 -142171930 + AluSq SINE Alu 1 313 0 2134 104 27 0 chr10 3417522 3417819 -142171469 - AluSx SINE Alu -2 310 6 21 0 0 0 chr10 3418266 3418287 -142171001 + AT_rich Low_complexity Low_complexity 1 21 0 384 191 0 0 chr10 3419110 3419194 -142170094 + (CA)n Simple_repeat Simple_repeat 1 84 0 208 339 0 33 chr10 3420263 3420443 -142168845 + (CACG)n Simple_repeat Simple_repeat 4 177 0 275 317 0 33 chr10 3420678 3420858 -142168430 + (CACG)n Simple_repeat Simple_repeat 4 177 0 252 176 0 157 chr10 3422284 3422386 -142166902 + LTR46-int LTR ERV1 525 610 -6375 2325 89 0 10 chr10 3422770 3423072 -142166216 + AluY SINE Alu 2 300 -11 1648 173 0 31 chr10 3423073 3423362 -142165926 + AluSx SINE Alu 17 296 -16 803 131 31 8 chr10 3423513 3423643 -142165645 - FLAM_C SINE Alu 0 133 1 1371 283 74 20 chr10 3425289 3425777 -142163511 - LTR40a LTR ERVL 0 519 6 407 300 29 14 chr10 3426415 3426555 -142162733 + MLT1J1 LTR MaLR 64 205 -241 1376 215 101 46 chr10 3427012 3427450 -142161838 - MER31B LTR ERV1 0 466 5 466 216 166 14 chr10 3427765 3427904 -142161384 - MER58B DNA MER1_type -1 340 181 949 240 103 39 chr10 3427954 3428342 -142160946 + LTR37A LTR ERV1 13 425 -1 2381 80 0 46 chr10 3429788 3430114 -142159174 - AluY SINE Alu 0 311 1 270 268 32 16 chr10 3430252 3430375 -142158913 + (TA)n Simple_repeat Simple_repeat 1 125 0 988 75 14 7 chr10 3432398 3432545 -142156743 + (TTTC)n Simple_repeat Simple_repeat 2 149 0 865 215 178 24 chr10 3433418 3433635 -142155653 + MER2 DNA MER2_type 1 278 -66 2082 141 0 0 chr10 3433635 3433933 -142155355 - AluSx SINE Alu -14 298 1 865 215 178 24 chr10 3433933 3434013 -142155275 + MER2 DNA MER2_type 278 344 0 422 207 58 0 chr10 3434328 3434415 -142154873 - MER2 DNA MER2_type -200 145 54 837 38 0 0 chr10 3434419 3434524 -142154764 + (GA)n Simple_repeat Simple_repeat 1 105 0 2171 113 24 0 chr10 3434650 3434943 -142154345 + AluSq SINE Alu 1 300 -13 225 317 52 57 chr10 3437336 3437566 -142151722 - L1MCc LINE L1 -6176 247 19 1875 154 34 0 chr10 3437625 3437747 -142151541 + AluSx SINE Alu 1 117 -195 240 35 0 0 chr10 3437747 3437776 -142151512 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 1875 154 34 0 chr10 3437776 3437946 -142151342 + AluSx SINE Alu 117 303 -9 23 0 0 0 chr10 3437952 3437975 -142151313 + AT_rich Low_complexity Low_complexity 1 23 0 535 168 35 0 chr10 3439236 3439349 -142149939 - MER96B DNA MER1_type? -50 367 251 434 324 50 16 chr10 3439569 3439751 -142149537 + MIR SINE MIR 75 262 0 207 214 0 0 chr10 3439751 3439793 -142149495 + (TTG)n Simple_repeat Simple_repeat 2 43 0 180 252 29 68 chr10 3440661 3440764 -142148524 - L2 LINE L2 -250 3022 2924 212 364 8 8 chr10 3441475 3441593 -142147695 - L2 LINE L2 -1 3312 3195 493 226 36 67 chr10 3442392 3442587 -142146701 + LTR33 LTR ERVL 19 207 -314 257 295 60 34 chr10 3442720 3442869 -142146419 + LTR33 LTR ERVL 367 519 -2 275 264 130 0 chr10 3443949 3444051 -142145237 + MIR SINE MIR 45 157 -62 644 230 11 59 chr10 3444482 3444669 -142144619 + MER5B DNA MER1_type 1 178 0 182 289 121 12 chr10 3445038 3445121 -142144167 + L2 LINE L2 3184 3275 -38 1870 183 21 18 chr10 3445132 3445521 -142143767 - MLT1B LTR MaLR 0 390 1 1649 156 7 40 chr10 3446662 3446963 -142142325 + AluJb SINE Alu 1 291 -21 404 293 0 43 chr10 3446981 3447169 -142142119 + (TATATG)n Simple_repeat Simple_repeat 1 180 0 446 297 11 34 chr10 3447197 3447372 -142141916 + (TATG)n Simple_repeat Simple_repeat 1 171 0 264 77 0 0 chr10 3449911 3449950 -142139338 + (CA)n Simple_repeat Simple_repeat 1 39 0 266 25 0 50 chr10 3449966 3450006 -142139282 + (GAAAA)n Simple_repeat Simple_repeat 3 40 0 1557 205 15 36 chr10 3450673 3451009 -142138279 + MLT1A1 LTR MaLR 4 332 -33 303 290 153 0 chr10 3451299 3451423 -142137865 - MIR SINE MIR -14 248 106 2245 153 33 2 chr10 3451992 3452385 -142136903 - L1M2 LINE L1 -558 5742 5338 3378 141 36 10 chr10 3452385 3452820 -142136468 + L1MA4 LINE L1 5698 6154 -146 2334 116 36 30 chr10 3452820 3453182 -142136106 + THE1B LTR MaLR 1 364 0 3378 141 36 10 chr10 3453182 3453325 -142135963 + L1MA4 LINE L1 6154 6292 -8 731 169 15 0 chr10 3453351 3453487 -142135801 + L1MA4 LINE L1 6163 6300 0 2269 152 93 0 chr10 3454065 3454474 -142134814 + LTR47A LTR ERVL 6 452 0 266 339 0 8 chr10 3454615 3454742 -142134546 + MIR SINE MIR 96 221 -41 2154 158 26 16 chr10 3455190 3455576 -142133712 + L1PA15 LINE L1 5774 6163 -2 247 130 0 0 chr10 3455671 3455717 -142133571 + L1MC4 LINE L1 6658 6703 -1339 207 225 0 0 chr10 3455718 3455758 -142133530 + (TA)n Simple_repeat Simple_repeat 1 40 0 21 0 0 0 chr10 3455978 3455999 -142133289 + AT_rich Low_complexity Low_complexity 1 21 0 270 343 30 35 chr10 3456024 3456225 -142133063 + MIR SINE MIR 15 214 -48 2052 123 3 3 chr10 3458699 3458991 -142130297 - AluSx SINE Alu -20 292 1 22 0 0 0 chr10 3459541 3459563 -142129725 + AT_rich Low_complexity Low_complexity 1 22 0 368 265 0 0 chr10 3460461 3460544 -142128744 - MLT1D LTR MaLR -389 116 34 2987 283 76 50 chr10 3460544 3463107 -142126181 + L1ME3A LINE L1 3346 5990 -180 1676 143 20 61 chr10 3463107 3463432 -142125856 - AluJb SINE Alu 0 313 1 2987 283 76 50 chr10 3463432 3463572 -142125716 + L1ME3A LINE L1 5990 6125 -45 25 0 0 0 chr10 3463701 3463726 -142125562 + AT_rich Low_complexity Low_complexity 1 25 0 2176 119 17 0 chr10 3464868 3465170 -142124118 + AluSq SINE Alu 1 307 -6 28 29 0 0 chr10 3465866 3465901 -142123387 + AT_rich Low_complexity Low_complexity 1 35 0 337 310 150 0 chr10 3467567 3467680 -142121608 + MIR SINE MIR 63 192 -70 2188 90 3 26 chr10 3468078 3468390 -142120898 + AluSp SINE Alu 1 305 -8 479 331 96 11 chr10 3468483 3468661 -142120627 + MIR3 SINE MIR 10 202 -6 2007 107 0 0 chr10 3468920 3469223 -142120065 + AluSx SINE Alu 12 314 0 2170 122 0 0 chr10 3469375 3469679 -142119609 + AluSx SINE Alu 1 304 -8 306 262 192 77 chr10 3470457 3470743 -142118545 - MLT1E1 LTR MaLR -23 631 313 4195 76 53 32 chr10 3471182 3471472 -142117816 + L1PB1 LINE L1 5522 5804 -347 369 0 0 0 chr10 3471472 3471513 -142117775 + (CA)n Simple_repeat Simple_repeat 1 41 0 4195 76 53 32 chr10 3471513 3471839 -142117449 + L1PB1 LINE L1 5804 6151 0 1844 237 59 13 chr10 3471873 3472328 -142116960 + MLT1D LTR MaLR 13 488 -17 3520 218 36 139 chr10 3472348 3473874 -142115414 + MLT1D-int LTR MaLR 3 1371 0 1040 228 25 22 chr10 3473874 3474150 -142115138 + MLT1D LTR MaLR 1 277 -228 1414 171 74 119 chr10 3474157 3474784 -142114504 + LTR49 LTR ERV1 5 565 0 1016 228 50 0 chr10 3474784 3475003 -142114285 + MLT1D LTR MaLR 276 505 0 2267 68 0 42 chr10 3476270 3476577 -142112711 - AluY SINE Alu -13 298 5 486 272 18 0 chr10 3476989 3477103 -142112185 + MIR SINE MIR 97 212 -50 2218 117 39 28 chr10 3477263 3477623 -142111665 + THE1B LTR MaLR 1 364 0 2262 59 28 0 chr10 3479184 3479473 -142109815 - AluY SINE Alu -14 297 1 2315 119 14 6 chr10 3481214 3481566 -142107722 + THE1A LTR MaLR 1 355 0 2032 124 10 3 chr10 3483435 3483741 -142105547 - AluSq SINE Alu -5 308 1 836 308 198 14 chr10 3486301 3486805 -142102483 - L2 LINE L2 -599 2715 2119 22 0 0 0 chr10 3487623 3487645 -142101643 + AT_rich Low_complexity Low_complexity 1 22 0 1823 138 0 43 chr10 3487700 3488005 -142101283 + AluSx SINE Alu 1 292 -20 5618 129 19 2 chr10 3488241 3489453 -142099835 + L1PB3 LINE L1 4926 6154 0 21 71 0 0 chr10 3491193 3491235 -142098053 + AT_rich Low_complexity Low_complexity 1 42 0 2274 82 0 0 chr10 3492225 3492519 -142096769 - AluSg SINE Alu -16 294 1 539 309 29 24 chr10 3494670 3494916 -142094372 - L3 LINE CR1 -190 1387 1141 288 346 26 19 chr10 3495374 3495530 -142093758 + (TATATG)n Simple_repeat Simple_repeat 1 157 0 * 426 354 17 0 chr10 3495467 3495642 -142093646 + (TG)n Simple_repeat Simple_repeat 1 178 0 309 117 81 18 chr10 3496073 3496184 -142093104 + (CTATA)n Simple_repeat Simple_repeat 3 120 0 189 94 0 0 chr10 3497650 3497682 -142091606 + (CCCTAA)n Simple_repeat Simple_repeat 2 33 0 22 0 0 0 chr10 3498629 3498651 -142090637 + AT_rich Low_complexity Low_complexity 1 22 0 489 273 169 7 chr10 3500249 3500403 -142088885 - MIR SINE MIR -45 217 39 407 217 111 40 chr10 3501556 3501739 -142087549 - MIR SINE MIR -17 245 48 213 39 0 0 chr10 3501757 3501783 -142087505 + (CAG)n Simple_repeat Simple_repeat 3 28 0 1061 260 101 9 chr10 3503715 3504061 -142085227 - MLT1B LTR MaLR -12 378 1 376 339 60 50 chr10 3504646 3504997 -142084291 - L1ME4a LINE L1 -269 5852 5493 347 56 19 0 chr10 3504997 3505051 -142084237 + (CA)n Simple_repeat Simple_repeat 2 56 0 376 339 60 50 chr10 3505051 3505183 -142084105 - L1ME4a LINE L1 -628 5493 5364 403 273 53 33 chr10 3505599 3505749 -142083539 - L1ME4a LINE L1 -1111 5035 4883 2075 148 48 31 chr10 3506272 3506630 -142082658 + THE1B LTR MaLR 1 364 0 275 233 17 0 chr10 3506835 3506895 -142082393 + MLT1A1 LTR MaLR 2 62 -366 638 263 80 77 chr10 3506930 3507204 -142082084 + MLT1A1 LTR MaLR 80 354 -11 2274 159 36 31 chr10 3508428 3508976 -142080312 - MLT2A2 LTR ERVL 0 554 1 189 333 23 23 chr10 3508976 3509063 -142080225 - MIR SINE MIR -148 114 28 333 47 0 0 chr10 3509504 3509547 -142079741 + (TTA)n Simple_repeat Simple_repeat 3 45 0 7230 51 1 1 chr10 3509548 3511094 -142078194 - L1PA5 LINE L1 -16 6138 4597 1617 136 19 0 chr10 3513253 3513518 -142075770 - L1MA8 LINE L1 -28 6263 5994 803 99 8 0 chr10 3513768 3513889 -142075399 - AluSg/x SINE Alu -13 299 178 293 237 45 128 chr10 3513912 3514068 -142075220 + MIR SINE MIR 47 189 -73 1961 53 32 0 chr10 3514549 3514796 -142074492 + L1PA7 LINE L1 5900 6154 0 23 0 0 0 chr10 3515080 3515103 -142074185 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr10 3517027 3517055 -142072233 + AT_rich Low_complexity Low_complexity 1 28 0 333 0 0 0 chr10 3517601 3517638 -142071650 + (TTA)n Simple_repeat Simple_repeat 3 39 0 1542 50 0 0 chr10 3517638 3517819 -142071469 - L1PA3 LINE L1 -18 6137 5957 871 177 0 0 chr10 3518336 3518477 -142070811 - AluJb SINE Alu -32 280 140 664 247 67 109 chr10 3518579 3518595 -142070693 - L1MC5 LINE L1 -87 7874 7859 2352 67 3 0 chr10 3518595 3518878 -142070410 - AluSp SINE Alu -29 284 1 664 247 67 109 chr10 3518878 3519427 -142069861 - L1MC5 LINE L1 -102 7859 7333 472 198 108 0 chr10 3519431 3519542 -142069746 + Charlie5 DNA MER1_type 2 124 -2488 1348 197 72 40 chr10 3519542 3519918 -142069370 + Charlie5 DNA MER1_type 2236 2623 0 245 118 0 0 chr10 3520517 3520551 -142068737 + HSMAR1 DNA Mariner 1 34 -1253 789 272 48 97 chr10 3520569 3521136 -142068152 - L1MC5 LINE L1 -812 7149 6611 29 47 0 0 chr10 3521175 3521218 -142068070 + AT_rich Low_complexity Low_complexity 1 43 0 2361 100 0 3 chr10 3521506 3521816 -142067472 - AluSg SINE Alu -1 309 1 225 204 19 48 chr10 3523643 3523746 -142065542 + (TTATA)n Simple_repeat Simple_repeat 4 103 0 4698 36 0 0 chr10 3524334 3524858 -142064430 + L1PA5 LINE L1 5629 6152 -2 398 248 57 0 chr10 3525323 3525464 -142063824 - MER103 DNA DNA -14 152 4 2025 145 0 7 chr10 3525490 3525794 -142063494 - AluSx SINE Alu -10 302 1 265 331 0 8 chr10 3526056 3526183 -142063105 + (TA)n Simple_repeat Simple_repeat 1 126 0 412 270 25 17 chr10 3526398 3526582 -142062706 + L1ME LINE L1 5478 5575 -546 1845 162 3 19 chr10 3526631 3526946 -142062342 - AluSx SINE Alu -2 310 1 265 296 56 38 chr10 3527527 3527726 -142061562 + L1ME LINE L1 5686 5825 -296 200 332 179 11 chr10 3528107 3528297 -142060991 + MIR SINE MIR 27 248 -14 282 29 0 0 chr10 3528450 3528485 -142060803 + (TG)n Simple_repeat Simple_repeat 2 36 0 323 264 90 42 chr10 3528497 3528641 -142060647 - MLT2B2 LTR ERVL -81 434 284 * 614 203 50 51 chr10 3528616 3528818 -142060470 - MLT2B1 LTR ERVL -255 209 1 26 64 0 0 chr10 3528881 3528928 -142060360 + AT_rich Low_complexity Low_complexity 1 47 0 3458 149 10 0 chr10 3528943 3529452 -142059836 + MER75 DNA T2_type 1 514 0 496 251 175 54 chr10 3529553 3529907 -142059381 + MLT1H LTR MaLR 117 513 -36 1663 172 31 0 chr10 3530120 3530411 -142058877 - AluJb SINE Alu -6 306 7 563 273 20 0 chr10 3532188 3532338 -142056950 + MER58B DNA MER1_type 185 337 -4 581 123 123 0 chr10 3533078 3533192 -142056096 + L1MA4 LINE L1 6169 6296 -4 306 319 8 0 chr10 3533358 3533477 -142055811 - MER45A DNA AcHobo 0 178 59 549 264 17 17 chr10 3535045 3535223 -142054065 - MER45A DNA AcHobo 0 178 1 210 308 125 42 chr10 3537525 3537645 -142051643 - MIR SINE MIR -116 146 17 260 276 257 0 chr10 3539322 3539427 -142049861 - L2 LINE L2 -4 3268 3137 2299 99 7 0 chr10 3541389 3541691 -142047597 + AluSq SINE Alu 1 304 -9 183 80 0 0 chr10 3542480 3542505 -142046783 + (GA)n Simple_repeat Simple_repeat 1 25 0 605 101 39 51 chr10 3542507 3542685 -142046603 + (TAGA)n Simple_repeat Simple_repeat 3 178 0 501 117 62 41 chr10 3542719 3543064 -142046224 + (TAGA)n Simple_repeat Simple_repeat 1 352 0 665 90 34 34 chr10 3543123 3543300 -142045988 + (TAGA)n Simple_repeat Simple_repeat 3 179 0 389 230 11 0 chr10 3544429 3544516 -142044772 + MER33 DNA MER1_type 1 88 -236 671 133 97 67 chr10 3544656 3544851 -142044437 + MER33 DNA MER1_type 90 290 -34 234 347 60 7 chr10 3546682 3546832 -142042456 - MARNA DNA Mariner -27 559 402 21 0 0 0 chr10 3548297 3548318 -142040970 + AT_rich Low_complexity Low_complexity 1 21 0 360 355 17 29 chr10 3548725 3548897 -142040391 - MIR3 SINE MIR -6 202 33 2225 111 13 3 chr10 3549477 3549784 -142039504 - AluSx SINE Alu 0 312 3 812 163 8 0 chr10 3551193 3551322 -142037966 + FLAM_C SINE Alu 1 130 -13 474 316 21 21 chr10 3552671 3552864 -142036424 + MIR SINE MIR 70 262 0 22 0 0 0 chr10 3552911 3552933 -142036355 + AT_rich Low_complexity Low_complexity 1 22 0 2321 100 0 0 chr10 3553715 3554014 -142035274 + AluSq SINE Alu 1 299 -14 648 102 0 0 chr10 3554234 3554322 -142034966 - MLT1D LTR MaLR -45 460 373 1319 227 96 67 chr10 3554454 3554935 -142034353 + MLT1D LTR MaLR 3 497 -8 440 296 62 40 chr10 3555157 3555461 -142033827 - L1ME4a LINE L1 -262 5859 5549 21 0 0 0 chr10 3555884 3555905 -142033383 + AT_rich Low_complexity Low_complexity 1 21 0 239 361 83 0 chr10 3555919 3556052 -142033236 + MIR SINE MIR 119 262 0 284 257 0 9 chr10 3557396 3557505 -142031783 + (TG)n Simple_repeat Simple_repeat 1 108 0 450 376 0 0 chr10 3557517 3557695 -142031593 + (TG)n Simple_repeat Simple_repeat 1 178 0 21 71 0 0 chr10 3558883 3558925 -142030363 + AT_rich Low_complexity Low_complexity 1 42 0 181 170 0 85 chr10 3559071 3559118 -142030170 + L2 LINE L2 3230 3272 0 511 318 88 10 chr10 3560199 3560391 -142028897 + MIR SINE MIR 11 217 -45 21 36 0 0 chr10 3560462 3560490 -142028798 + AT_rich Low_complexity Low_complexity 1 28 0 357 293 68 63 chr10 3560863 3561307 -142027981 + L1ME4a LINE L1 5569 6014 -107 2334 78 7 0 chr10 3561603 3562069 -142027219 - AluSx SINE Alu 0 468 1 1845 86 37 19 chr10 3562878 3563146 -142026142 + AluY SINE Alu 39 311 0 207 0 0 0 chr10 3563748 3563771 -142025517 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 566 148 0 0 chr10 3563773 3563854 -142025434 - AluSp/q SINE Alu -21 292 212 367 292 76 70 chr10 3564551 3564866 -142024422 - MER102b DNA MER1_type 0 341 25 1129 210 85 48 chr10 3564944 3565296 -142023992 - MLT1A1 LTR MaLR 0 365 1 338 308 135 39 chr10 3566243 3566502 -142022786 - L2 LINE L2 -1415 1899 1666 3271 75 5 5 chr10 3566502 3566915 -142022373 - L1PA10 LINE L1 0 6168 5756 338 308 135 39 chr10 3566915 3567113 -142022175 - L2 LINE L2 -1648 1666 1398 2359 72 0 3 chr10 3567870 3568162 -142021126 + AluY SINE Alu 21 311 0 224 339 0 0 chr10 3568209 3568271 -142021017 + MIR SINE MIR 58 119 -143 590 222 157 0 chr10 3568720 3568905 -142020383 + L1ME2 LINE L1 4698 4911 -1235 1734 260 95 9 chr10 3568976 3569806 -142019482 + L1ME2 LINE L1 5010 6156 -14 1081 197 0 0 chr10 3570590 3570793 -142018495 + L1PA16 LINE L1 1 203 -6646 * 12353 197 18 19 chr10 3570790 3574886 -142014402 + L1PA16 LINE L1 998 5098 -1771 195 42 0 0 chr10 3574886 3574910 -142014378 + (CA)n Simple_repeat Simple_repeat 1 24 0 12353 197 18 19 chr10 3574910 3576378 -142012910 + L1PA16 LINE L1 5098 6565 -304 313 64 0 0 chr10 3576387 3576434 -142012854 - Alu SINE Alu 0 308 262 1498 164 13 41 chr10 3576434 3576752 -142012536 + L1PA16 LINE L1 6559 6867 -2 30 27 0 0 chr10 3576808 3576845 -142012443 + AT_rich Low_complexity Low_complexity 1 37 0 186 167 0 0 chr10 3576875 3576911 -142012377 + (TA)n Simple_repeat Simple_repeat 2 37 0 583 114 0 11 chr10 3577934 3578022 -142011266 - AluS SINE Alu -224 88 2 783 157 15 66 chr10 3578290 3578488 -142010800 - MER65A LTR ERV1 -2 443 256 27 49 0 0 chr10 3579478 3579519 -142009769 + AT_rich Low_complexity Low_complexity 1 41 0 288 130 0 0 chr10 3580199 3580245 -142009043 + (T)n Simple_repeat Simple_repeat 1 46 0 277 239 138 62 chr10 3581388 3581648 -142007640 + L1ME4a LINE L1 5492 5771 -350 249 260 30 0 chr10 3581912 3582012 -142007276 + L1ME4a LINE L1 6003 6105 -16 29 47 0 0 chr10 3582083 3582126 -142007162 + AT_rich Low_complexity Low_complexity 1 43 0 923 105 0 30 chr10 3582140 3582273 -142007015 - FLAM_C SINE Alu -6 137 9 193 56 28 28 chr10 3583490 3583526 -142005762 + (TTTTTG)n Simple_repeat Simple_repeat 3 38 0 225 291 108 7 chr10 3583554 3583702 -142005586 - MER103 DNA DNA -2 164 2 4134 72 18 0 chr10 3584631 3585186 -142004102 + L1PB1 LINE L1 5583 6147 -4 284 234 85 21 chr10 3585709 3585803 -142003485 - L2 LINE L2 -11 3261 3162 1829 173 21 0 chr10 3585820 3586156 -142003132 + MER7A DNA MER2_type 6 346 0 22 0 0 0 chr10 3587259 3587281 -142002007 + AT_rich Low_complexity Low_complexity 1 22 0 430 223 47 7 chr10 3589921 3590069 -141999219 + MER53 DNA DNA 8 161 -28 1087 206 54 97 chr10 3590341 3590723 -141998565 + MLT1C LTR MaLR 22 390 0 1272 299 103 23 chr10 3590991 3591693 -141997595 + L1ME3A LINE L1 5383 6140 -30 1442 127 0 49 chr10 3591734 3591922 -141997366 - L1PB1 LINE L1 -1 6150 5975 1980 124 64 3 chr10 3591922 3592205 -141997083 - AluSc SINE Alu -9 300 1 1442 127 0 49 chr10 3592205 3592261 -141997027 - L1PB1 LINE L1 -176 5975 5918 401 233 10 19 chr10 3592287 3592390 -141996898 - MLT2D LTR ERVL -230 184 83 852 317 70 19 chr10 3592672 3593619 -141995669 - L1MC4a LINE L1 -831 5315 4948 221 360 107 0 chr10 3594974 3595124 -141994164 - L2 LINE L2 -2050 1264 1099 207 88 0 0 chr10 3595245 3595279 -141994009 + (TC)n Simple_repeat Simple_repeat 2 35 0 302 326 17 76 chr10 3596162 3596334 -141992954 - MER5B DNA MER1_type -15 163 2 29 0 0 0 chr10 3596979 3597008 -141992280 + AT_rich Low_complexity Low_complexity 1 29 0 528 167 10 0 chr10 3597342 3597444 -141991844 - FLAM_A SINE Alu -4 138 36 556 285 52 10 chr10 3597444 3597749 -141991539 + MLT1J LTR MaLR 40 357 -154 1021 103 27 0 chr10 3597766 3597912 -141991376 + BC200 scRNA scRNA 1 150 -50 241 186 57 129 chr10 3597913 3598013 -141991275 + MLT1J LTR MaLR 394 485 -26 3822 76 39 9 chr10 3598013 3598574 -141990714 - L1PA10 LINE L1 0 6168 5606 241 186 57 129 chr10 3598574 3598597 -141990691 + MLT1J LTR MaLR 485 508 -3 2266 69 26 23 chr10 3599660 3599966 -141989322 - AluSq SINE Alu -6 307 1 231 262 12 0 chr10 3600627 3600711 -141988577 - MER53 DNA DNA 0 189 105 461 108 0 48 chr10 3602688 3602771 -141986517 - L1PA10 LINE L1 0 6168 6090 798 19 37 0 chr10 3602771 3602879 -141986409 + L1P LINE L1 5316 5427 -734 450 286 136 15 chr10 3603010 3603216 -141986072 - MIR SINE MIR -18 244 14 199 329 101 25 chr10 3604003 3604161 -141985127 - MIR SINE MIR -9 253 84 2453 68 0 0 chr10 3605499 3605795 -141983493 - AluY SINE Alu -15 296 1 23 54 0 0 chr10 3605958 3605995 -141983293 + AT_rich Low_complexity Low_complexity 1 37 0 460 266 154 0 chr10 3606320 3606508 -141982780 - MLT1L LTR MaLR -8 607 391 219 307 13 13 chr10 3606778 3606853 -141982435 - L2 LINE L2 0 3272 3198 929 178 6 12 chr10 3607777 3607940 -141981348 - FRAM SINE Alu -14 162 1 516 193 106 19 chr10 3607951 3608112 -141981176 + Charlie1b DNA MER1_type 109 283 -240 819 198 11 21 chr10 3610685 3610872 -141978416 - AluJo SINE Alu -13 299 115 2196 229 59 39 chr10 3611352 3611945 -141977343 - MER77 LTR ERV1 0 605 1 362 304 26 41 chr10 3612152 3612346 -141976942 + MLT1K LTR MaLR 154 344 -244 447 86 14 20 chr10 3612463 3612548 -141976740 - MLT1E1 LTR MaLR -512 81 1 257 254 33 90 chr10 3612551 3612673 -141976615 - MIR SINE MIR -67 195 81 1080 224 59 57 chr10 3612984 3613373 -141975915 + MLT1C LTR MaLR 34 423 -44 712 184 6 34 chr10 3613519 3613681 -141975607 - L1ME LINE L1 -547 5574 5421 * 3374 202 89 10 chr10 3613679 3614916 -141974372 - L1MB8 LINE L1 -4 6174 4834 2082 143 0 7 chr10 3615132 3615309 -141973979 - AluSx SINE Alu -6 306 130 189 74 0 0 chr10 3615309 3615336 -141973952 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2082 143 0 7 chr10 3615336 3615466 -141973822 - AluSx SINE Alu -182 130 1 1007 196 86 8 chr10 3615860 3616105 -141973183 + MLT1C LTR MaLR 1 264 -203 309 254 83 55 chr10 3618272 3618453 -141970835 - MIR SINE MIR -6 256 71 239 160 40 20 chr10 3618601 3618651 -141970637 + MIR SINE MIR 90 140 -122 198 0 0 0 chr10 3618759 3618781 -141970507 + (CAAAA)n Simple_repeat Simple_repeat 1 22 0 2139 118 3 0 chr10 3619163 3619450 -141969838 + AluSx SINE Alu 6 293 -19 1337 224 80 23 chr10 3619662 3620099 -141969189 - MLT1C LTR MaLR 0 467 6 250 300 50 25 chr10 3620214 3620334 -141968954 - MLT1J2 LTR MaLR -45 405 283 1269 213 68 21 chr10 3620465 3620845 -141968443 + L1M4 LINE L1 4901 5298 -848 369 266 199 50 chr10 3620870 3621482 -141967806 + L2 LINE L2 2625 3311 -2 1762 87 101 56 chr10 3621895 3622181 -141967107 - AluSg SINE Alu -9 301 3 2071 144 3 3 chr10 3622713 3623025 -141966263 + AluSx SINE Alu 1 312 0 1140 290 91 22 chr10 3623063 3623614 -141965674 + MLT1E LTR MaLR 5 593 0 350 335 153 0 chr10 3623892 3624062 -141965226 + LTR41 LTR ERVL 342 537 -236 278 253 126 0 chr10 3624170 3624265 -141965023 + L2 LINE L2 2461 2567 -747 308 299 76 28 chr10 3624557 3624670 -141964618 + MIR3 SINE MIR 25 148 -60 2144 115 0 20 chr10 3624670 3624975 -141964313 + AluSx SINE Alu 1 299 -13 308 299 76 28 chr10 3624975 3625005 -141964283 + MIR3 SINE MIR 148 175 -33 236 339 57 16 chr10 3625264 3625388 -141963900 + MIR SINE MIR 24 152 -110 339 153 0 0 chr10 3625730 3625789 -141963499 + AluS SINE Alu 2 60 -248 1731 161 16 20 chr10 3626659 3626963 -141962325 + AluJo SINE Alu 1 303 -9 437 254 8 8 chr10 3627162 3627280 -141962008 + L2 LINE L2 3193 3310 -3 363 23 0 0 chr10 3678500 3678544 -141910744 + (TG)n Simple_repeat Simple_repeat 1 44 0 1550 99 5 0 chr10 3679218 3679431 -141909857 - AluSq SINE Alu -18 295 82 282 324 50 22 chr10 3679431 3679562 -141909726 - MIR SINE MIR -76 186 49 207 200 24 47 chr10 3680017 3680102 -141909186 + (CCCG)n Simple_repeat Simple_repeat 2 84 0 248 310 80 0 chr10 3680586 3680699 -141908589 - MIR SINE MIR -55 207 86 23 0 0 0 chr10 3680997 3681020 -141908268 + AT_rich Low_complexity Low_complexity 1 23 0 705 133 0 17 chr10 3681086 3681206 -141908082 - L1PA13 LINE L1 -1 6162 6045 206 261 138 0 chr10 3681708 3681773 -141907515 + MIR SINE MIR 189 262 0 425 155 0 39 chr10 3681820 3681923 -141907365 - L1PA2 LINE L1 0 6155 6057 56 86 0 0 chr10 3681972 3682112 -141907176 + GC_rich Low_complexity Low_complexity 1 140 0 504 189 0 0 chr10 3682271 3682414 -141906874 + (CA)n Simple_repeat Simple_repeat 1 143 0 314 80 20 0 chr10 3682528 3682578 -141906710 + MADE1 DNA Mariner 30 80 0 183 80 0 0 chr10 3683965 3683990 -141905298 + (A)n Simple_repeat Simple_repeat 1 25 0 231 280 23 76 chr10 3684185 3684317 -141904971 + L2 LINE L2 3189 3313 0 * 426 333 77 16 chr10 3684311 3684494 -141904794 - MIR SINE MIR -18 244 51 324 264 66 16 chr10 3685563 3685684 -141903604 - MIR SINE MIR -29 233 107 201 39 0 0 chr10 3687048 3687074 -141902214 + (TTCA)n Simple_repeat Simple_repeat 3 28 0 1648 123 19 112 chr10 3687119 3687493 -141901795 + MER44D DNA MER2_type 1 609 0 517 192 24 6 chr10 3687753 3688097 -141901191 + (TG)n Simple_repeat Simple_repeat 1 350 0 181 371 171 12 chr10 3688556 3688726 -141900562 - MIR SINE MIR -20 242 46 941 151 0 17 chr10 3689841 3690013 -141899275 - L1MA5A LINE L1 -7 6290 6122 391 323 65 26 chr10 3692252 3692484 -141896804 - L2 LINE L2 0 3313 3073 291 295 213 22 chr10 3692519 3692885 -141896403 - L2 LINE L2 -342 2972 2537 209 373 18 9 chr10 3693269 3693379 -141895909 - MIR SINE MIR -127 135 25 275 265 0 10 chr10 3693489 3693587 -141895701 + (TATG)n Simple_repeat Simple_repeat 2 98 0 26 0 0 0 chr10 3693617 3693643 -141895645 + AT_rich Low_complexity Low_complexity 1 26 0 1645 175 0 4 chr10 3693998 3694278 -141895010 + AluJb SINE Alu 1 279 -33 230 200 40 0 chr10 3694288 3694338 -141894950 - MLT1A1 LTR MaLR -313 52 1 1970 25 0 4 chr10 3696490 3696731 -141892557 - L1P LINE L1 -779 5367 5128 1222 14 0 0 chr10 3696731 3696876 -141892412 + L1P LINE L1 4981 5125 -1021 22 0 0 0 chr10 3697109 3697131 -141892157 + AT_rich Low_complexity Low_complexity 1 22 0 402 277 42 0 chr10 3697677 3697796 -141891492 + L1MC4 LINE L1 6580 6703 -1339 351 213 32 75 chr10 3697788 3697882 -141891406 + L1MC4 LINE L1 6614 6703 -1339 * 464 313 13 13 chr10 3698510 3698660 -141890628 + MIR SINE MIR 2 151 -111 399 154 0 154 chr10 3698667 3698771 -141890517 - MER1B DNA MER1_type 0 339 252 246 149 15 119 chr10 3698823 3698890 -141890398 - MER1B DNA MER1_type -63 276 217 561 314 49 14 chr10 3699027 3699250 -141890038 + HERVL LTR ERVL 3321 3551 -2213 1042 307 172 29 chr10 3699337 3700252 -141889036 + HERVL LTR ERVL 3621 4671 -852 344 291 208 21 chr10 3700886 3701127 -141888161 + LTR33 LTR ERVL 3 288 -233 1563 133 8 0 chr10 3702938 3703179 -141886109 - AluSx SINE Alu -15 297 55 798 207 101 30 chr10 3704032 3704465 -141884823 - MLT1D LTR MaLR 0 505 1 241 290 168 23 chr10 3704637 3704768 -141884520 - MIR SINE MIR -40 222 73 289 304 18 36 chr10 3704813 3704925 -141884363 - MIR SINE MIR -88 174 65 234 273 0 0 chr10 3705627 3705682 -141883606 - HAL1 LINE L1 -811 1696 1642 242 339 0 0 chr10 3706343 3706408 -141882880 + L2 LINE L2 3249 3313 0 427 296 71 12 chr10 3706851 3707091 -141882197 - HAL1 LINE L1 -744 1763 1510 651 278 116 4 chr10 3708459 3708700 -141880588 - L2 LINE L2 -24 3289 3022 5075 172 22 27 chr10 3708713 3709724 -141879564 - L1MA5A LINE L1 -1209 4937 3932 4670 151 46 15 chr10 3709717 3710858 -141878430 + L1MA5A LINE L1 4939 6102 -195 * 850 64 0 0 chr10 3711594 3711703 -141877585 - L1P LINE L1 -5129 1017 909 3670 47 0 24 chr10 3711703 3712203 -141877085 + L1PA4 LINE L1 5686 6174 0 230 0 33 0 chr10 3716233 3716263 -141873025 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 1803 114 78 0 chr10 3716304 3716575 -141872713 + AluSg SINE Alu 1 292 -18 455 228 44 0 chr10 3718185 3718299 -141870989 + MIR SINE MIR 26 144 -118 233 192 60 50 chr10 3718424 3718595 -141870693 - MLT1B LTR MaLR -68 522 336 * 1549 232 16 16 chr10 3718593 3718960 -141870328 + MLT1B LTR MaLR 8 374 -16 339 182 15 0 chr10 3719389 3719455 -141869833 - L1MA7 LINE L1 -428 5863 5797 354 284 52 74 chr10 3719881 3720110 -141869178 - L2 LINE L2 -2 3311 3088 1964 140 3 3 chr10 3720151 3720459 -141868829 - AluSx SINE Alu -4 308 1 402 291 35 70 chr10 3721102 3721189 -141868099 + L3 LINE CR1 1144 1224 -353 1934 140 0 3 chr10 3721189 3721481 -141867807 + AluSc SINE Alu 1 291 -18 402 291 35 70 chr10 3721481 3721565 -141867723 + L3 LINE CR1 1224 1309 -268 215 329 25 95 chr10 3722404 3722562 -141866726 - MIR SINE MIR -6 202 56 1163 225 49 70 chr10 3722707 3723093 -141866195 - MLT1B LTR MaLR -10 380 3 318 258 68 53 chr10 3723233 3723365 -141865923 - MIR SINE MIR -107 155 22 200 150 0 50 chr10 3725381 3725421 -141863867 + L2 LINE L2 3223 3260 -12 217 316 32 21 chr10 3727983 3728078 -141861210 - MER5A DNA MER1_type 0 189 94 215 229 21 0 chr10 3728182 3728230 -141861058 + CT-rich Low_complexity Low_complexity 4 52 0 311 277 21 7 chr10 3728363 3728484 -141860804 - MIR SINE MIR -74 134 15 226 189 0 0 chr10 3729269 3729306 -141859982 - LTR33 LTR ERVL 0 521 485 261 270 34 34 chr10 3729505 3729594 -141859694 - MERVL LTR ERVL -2286 3199 3111 1947 304 58 16 chr10 3729950 3730740 -141858548 - MERVL LTR ERVL -3048 2716 1894 223 329 12 75 chr10 3730803 3730964 -141858324 - L2 LINE L2 -888 2426 2276 1138 133 0 0 chr10 3731074 3731232 -141858056 + AluSc SINE Alu 135 292 -17 586 330 14 0 chr10 3731294 3731503 -141857785 - L2 LINE L2 -1259 2055 1844 285 51 0 0 chr10 3732601 3732640 -141856648 + (TG)n Simple_repeat Simple_repeat 2 40 0 332 128 0 0 chr10 3732915 3732962 -141856326 + AluJ/FLAM SINE Alu 14 60 -242 674 179 0 16 chr10 3732962 3733085 -141856203 - AluJo SINE Alu -122 190 70 252 0 0 0 chr10 3733107 3733135 -141856153 + (A)n Simple_repeat Simple_repeat 1 28 0 189 0 0 0 chr10 3733135 3733156 -141856132 + (GA)n Simple_repeat Simple_repeat 2 22 0 987 201 22 35 chr10 3733604 3733833 -141855455 + AluJo SINE Alu 71 296 -16 189 0 0 0 chr10 3735216 3735237 -141854051 + (TC)n Simple_repeat Simple_repeat 2 22 0 1725 176 7 21 chr10 3735252 3735542 -141853746 - AluJo SINE Alu -25 287 2 192 40 0 0 chr10 3735853 3735878 -141853410 + (A)n Simple_repeat Simple_repeat 1 25 0 281 262 36 12 chr10 3737501 3737585 -141851703 + MER103 DNA DNA 57 142 -24 2998 101 10 2 chr10 3737693 3738109 -141851179 + L1PB1 LINE L1 5720 6138 -13 194 0 39 0 chr10 3738112 3738138 -141851150 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 292 176 14 14 chr10 3738153 3738227 -141851061 + (CATATA)n Simple_repeat Simple_repeat 2 75 0 2720 30 0 0 chr10 3739621 3739922 -141849366 - AluY SINE Alu -10 301 1 225 154 0 0 chr10 3740990 3741029 -141848259 + CT-rich Low_complexity Low_complexity 2 40 0 21 0 0 0 chr10 3741676 3741697 -141847591 + GC_rich Low_complexity Low_complexity 1 21 0 516 252 35 0 chr10 3741697 3741840 -141847448 + MER5A DNA MER1_type 42 189 0 181 219 0 0 chr10 3741921 3741962 -141847326 + MER5B DNA MER1_type 5 45 -133 270 0 0 0 chr10 3742144 3742174 -141847114 + (TG)n Simple_repeat Simple_repeat 1 30 0 627 291 110 68 chr10 3742678 3743225 -141846063 + MLT1K LTR MaLR 14 583 -5 2159 112 7 3 chr10 3743603 3743897 -141845391 + AluSx SINE Alu 1 295 -17 2375 76 0 0 chr10 3744624 3744914 -141844374 - AluSc SINE Alu -19 290 1 218 256 11 67 chr10 3745654 3745703 -141843585 + L2 LINE L2 3184 3227 -45 3988 137 9 16 chr10 3745703 3745822 -141843466 - MER41B LTR ERV1 -2 633 515 2163 115 26 10 chr10 3745822 3746127 -141843161 + AluSq SINE Alu 1 310 -3 3988 137 9 16 chr10 3746127 3746644 -141842644 - MER41B LTR ERV1 -120 515 1 218 256 11 67 chr10 3746644 3746684 -141842604 + L2 LINE L2 3227 3268 -4 940 244 110 60 chr10 3746762 3747298 -141841990 + HAL1 LINE L1 1427 1989 -518 221 313 52 26 chr10 3747299 3747414 -141841874 + L2 LINE L2 3151 3268 -4 589 282 74 29 chr10 3747570 3747921 -141841367 + HAL1 LINE L1 2120 2486 -21 2246 207 76 8 chr10 3748013 3748524 -141840764 + MER44D DNA MER2_type 1 601 -4 273 285 179 20 chr10 3749750 3749901 -141839387 + MIR3 SINE MIR 8 182 -26 249 162 73 0 chr10 3751931 3751999 -141837289 + MIR SINE MIR 73 145 -117 725 296 73 54 chr10 3752325 3752951 -141836337 + L1MEc LINE L1 1593 2230 -4166 901 266 94 16 chr10 3752992 3753428 -141835860 + L1MEc LINE L1 2272 2741 -3474 306 243 110 143 chr10 3753444 3753745 -141835543 + L1MEc LINE L1 3051 3341 -2874 2472 195 133 16 chr10 3755313 3755943 -141833345 + MER39 LTR ERV1 4 707 0 23 33 0 0 chr10 3758358 3758388 -141830900 + AT_rich Low_complexity Low_complexity 1 30 0 2604 58 0 0 chr10 3758464 3758775 -141830513 - AluY SINE Alu 0 311 1 202 295 13 13 chr10 3760117 3760195 -141829093 - MIR SINE MIR -17 245 168 212 317 46 63 chr10 3760295 3760579 -141828709 + L2 LINE L2 2212 2490 -824 195 42 0 0 chr10 3760579 3760603 -141828685 + (TCCC)n Simple_repeat Simple_repeat 3 26 0 200 349 0 0 chr10 3762270 3762333 -141826955 + (CACG)n Simple_repeat Simple_repeat 2 64 0 2261 111 0 16 chr10 3762751 3763066 -141826222 + AluSx SINE Alu 1 310 -2 2255 65 0 7 chr10 3764190 3764465 -141824823 - AluY SINE Alu 0 311 39 683 317 74 54 chr10 3765135 3765306 -141823982 - L1ME LINE L1 -5066 1004 838 2254 115 0 0 chr10 3765306 3765602 -141823686 - AluSx SINE Alu -16 296 1 683 317 74 54 chr10 3765602 3766394 -141822894 - L1ME LINE L1 -5232 838 22 255 236 67 118 chr10 3766586 3766883 -141822405 - L1M4 LINE L1 -907 5239 4958 392 304 35 47 chr10 3767270 3767441 -141821847 + MIR SINE MIR 24 192 -70 2253 110 3 3 chr10 3767445 3767755 -141821533 + AluSx SINE Alu 3 312 0 499 276 7 73 chr10 3768263 3768538 -141820750 - L2 LINE L2 0 3313 3057 1916 142 48 0 chr10 3769914 3770209 -141819079 + AluSx SINE Alu 1 309 -3 2336 106 48 31 chr10 3770532 3770890 -141818398 + THE1B LTR MaLR 1 364 0 26 0 0 0 chr10 3771594 3771620 -141817668 + AT_rich Low_complexity Low_complexity 1 26 0 2198 117 0 0 chr10 3771889 3772179 -141817109 - AluSx SINE Alu -1 311 22 592 133 0 0 chr10 3772179 3772262 -141817026 - AluS SINE Alu -228 84 2 298 311 45 8 chr10 3772628 3772760 -141816528 - MIR SINE MIR -3 259 123 272 296 178 0 chr10 3773060 3773229 -141816059 + MLT1G1 LTR MaLR 358 556 -39 405 0 0 0 chr10 3774610 3774655 -141814633 + (CA)n Simple_repeat Simple_repeat 1 45 0 995 188 117 78 chr10 3774869 3775178 -141814110 - MLT1A1 LTR MaLR -32 333 13 378 352 58 19 chr10 3775515 3775588 -141813700 + L1ME LINE L1 5312 5381 -740 249 33 0 0 chr10 3775588 3775618 -141813670 + (TA)n Simple_repeat Simple_repeat 2 31 0 378 352 58 19 chr10 3775618 3775922 -141813366 + L1ME LINE L1 5381 5704 -417 1222 146 34 0 chr10 3776011 3776217 -141813071 + Tigger2 DNA MER2_type 1 213 -2505 886 172 0 49 chr10 3776214 3776312 -141812976 + Tigger2 DNA MER2_type 2554 2642 -66 * 1991 116 103 3 chr10 3776312 3776632 -141812656 - THE1A LTR MaLR 0 355 4 886 172 0 49 chr10 3776632 3776696 -141812592 + Tigger2 DNA MER2_type 2642 2708 0 24 0 0 0 chr10 3776763 3776787 -141812501 + AT_rich Low_complexity Low_complexity 1 24 0 391 250 96 13 chr10 3777144 3777300 -141811988 + L1ME LINE L1 5500 5668 -453 612 150 2 74 chr10 3777578 3777749 -141811539 - Charlie3 DNA MER1_type -65 2645 159 264 282 24 0 chr10 3778376 3778460 -141810828 - MIR SINE MIR -62 146 59 21 82 0 0 chr10 3779948 3779997 -141809291 + AT_rich Low_complexity Low_complexity 1 49 0 201 121 0 0 chr10 3780165 3780198 -141809090 + (T)n Simple_repeat Simple_repeat 1 33 0 228 176 27 14 chr10 3780980 3781054 -141808234 + (TA)n Simple_repeat Simple_repeat 2 76 0 246 164 0 0 chr10 3782257 3782312 -141806976 + T-rich Low_complexity Low_complexity 1 55 0 224 322 158 33 chr10 3784109 3784261 -141805027 + MIR3 SINE MIR 30 200 -8 241 174 14 29 chr10 3787792 3787861 -141801427 + A-rich Low_complexity Low_complexity 1 68 0 24 0 0 0 chr10 3788110 3788134 -141801154 + GC_rich Low_complexity Low_complexity 1 24 0 214 160 0 107 chr10 3789046 3789121 -141800167 + C-rich Low_complexity Low_complexity 5 71 0 244 280 42 59 chr10 3790859 3790977 -141798311 - MIR3 SINE MIR -38 170 55 21 0 0 0 chr10 3791372 3791393 -141797895 + AT_rich Low_complexity Low_complexity 1 21 0 1894 128 7 0 chr10 3791731 3792020 -141797268 - AluSx SINE Alu -21 291 1 574 284 100 8 chr10 3792418 3792679 -141796609 + L1ME2 LINE L1 4546 4830 -1316 1369 268 52 32 chr10 3792734 3793405 -141795883 - L1MCc LINE L1 -4888 1535 1217 945 262 0 9 chr10 3793405 3793630 -141795658 - MER58A DNA MER1_type -1 223 1 1369 268 52 32 chr10 3793630 3793839 -141795449 - L1MCc LINE L1 -5206 1217 1014 387 239 44 97 chr10 3793905 3794131 -141795157 - L1MCc LINE L1 -5541 882 669 533 254 178 9 chr10 3794159 3794372 -141794916 - L1MCc LINE L1 -5970 453 205 465 211 28 49 chr10 3794384 3794526 -141794762 - L1MCc LINE L1 -6259 164 26 299 183 33 0 chr10 3794526 3794586 -141794702 + L1ME2 LINE L1 4868 4929 -1217 241 213 0 53 chr10 3794620 3794695 -141794593 + A-rich Low_complexity Low_complexity 1 71 0 341 159 0 14 chr10 3794695 3794764 -141794524 + GA-rich Low_complexity Low_complexity 1 68 0 2216 261 91 27 chr10 3794771 3795887 -141793401 + L1ME2 LINE L1 4960 6152 -12 209 220 17 0 chr10 3796050 3796109 -141793179 + (TGGA)n Simple_repeat Simple_repeat 2 61 0 346 253 13 114 chr10 3796246 3796404 -141792884 + MIR SINE MIR 21 162 -100 201 240 91 66 chr10 3796420 3796541 -141792747 - MIR SINE MIR -36 226 103 2074 112 0 0 chr10 3797309 3797624 -141791664 + AluSx SINE Alu 1 315 0 183 156 0 0 chr10 3798985 3799017 -141790271 + (CACG)n Simple_repeat Simple_repeat 1 32 0 188 67 33 0 chr10 3799505 3799535 -141789753 + (TA)n Simple_repeat Simple_repeat 2 32 0 1730 130 72 4 chr10 3800493 3800769 -141788519 - AluSx SINE Alu -17 295 1 651 240 41 77 chr10 3801256 3801477 -141787811 + MER20 DNA MER1_type 1 213 -6 1581 205 73 6 chr10 3801501 3801843 -141787445 + MLT1A1 LTR MaLR 1 365 0 1616 135 15 0 chr10 3801923 3802182 -141787106 + AluSx SINE Alu 47 309 -3 24 32 0 0 chr10 3802188 3802219 -141787069 + AT_rich Low_complexity Low_complexity 1 31 0 356 327 145 0 chr10 3802428 3802587 -141786701 + MIR SINE MIR 81 262 0 190 269 58 0 chr10 3803114 3803166 -141786122 + L3 LINE CR1 1392 1446 -131 527 189 8 0 chr10 3804475 3804602 -141784686 + CT-rich Low_complexity Low_complexity 2 129 0 1979 121 0 0 chr10 3806855 3807158 -141782130 + AluSx SINE Alu 1 303 0 545 278 168 0 chr10 3807233 3807424 -141781864 - MIR SINE MIR 0 262 40 439 229 18 28 chr10 3807444 3807728 -141781560 + GA-rich Low_complexity Low_complexity 1 280 0 439 149 11 11 chr10 3808827 3808921 -141780367 + CT-rich Low_complexity Low_complexity 3 96 0 180 0 0 0 chr10 3809833 3809853 -141779435 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 238 263 75 25 chr10 3812114 3812194 -141777094 + MIR3 SINE MIR 10 93 -115 290 286 12 0 chr10 3813596 3813680 -141775608 + (CA)n Simple_repeat Simple_repeat 1 85 0 231 36 0 0 chr10 3814196 3814224 -141775064 + (CA)n Simple_repeat Simple_repeat 2 29 0 25 0 0 0 chr10 3814394 3814419 -141774869 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr10 3814456 3814479 -141774809 + AT_rich Low_complexity Low_complexity 1 23 0 359 21 21 0 chr10 3815784 3815832 -141773456 + (GA)n Simple_repeat Simple_repeat 2 50 0 264 191 0 0 chr10 3816453 3816500 -141772788 - MER39 LTR ERV1 -268 439 393 230 143 29 100 chr10 3816548 3816618 -141772670 - MER34 LTR ERV1 -411 131 67 231 273 52 44 chr10 3817131 3817228 -141772060 - BSR/Beta Satellite Satellite 0 282 187 248 214 205 9 chr10 3817228 3817340 -141771948 - MER101 LTR ERV1 -223 251 118 231 273 52 44 chr10 3817340 3817411 -141771877 - BSR/Beta Satellite Satellite -95 187 1 241 121 121 0 chr10 3817550 3817616 -141771672 + (TATAA)n Simple_repeat Simple_repeat 4 77 0 469 96 48 0 chr10 3818188 3818271 -141771017 + T-rich Low_complexity Low_complexity 3 89 0 2005 137 16 0 chr10 3818276 3818582 -141770706 - AluSq SINE Alu 0 313 3 2061 113 3 0 chr10 3818584 3818876 -141770412 - AluSx SINE Alu -13 299 7 1943 126 0 19 chr10 3818909 3819227 -141770061 - AluSx SINE Alu 0 312 1 237 159 0 0 chr10 3819915 3819959 -141769329 + (CA)n Simple_repeat Simple_repeat 1 44 0 201 154 0 0 chr10 3819959 3819998 -141769290 + (TG)n Simple_repeat Simple_repeat 2 40 0 639 334 155 7 chr10 3820155 3821143 -141768145 - L2 LINE L2 -5 3308 2103 356 329 6 32 chr10 3822489 3822647 -141766641 + MER63A DNA MER1_type 36 189 -21 217 362 105 51 chr10 3823063 3823320 -141765968 - L3b LINE CR1 -9 1574 1304 194 261 29 14 chr10 3824057 3824126 -141765162 - MIR SINE MIR -10 252 183 475 135 73 21 chr10 3824343 3824439 -141764849 + MER4A LTR ERV1 1 101 -563 * 1884 123 6 25 chr10 3824438 3824788 -141764500 + MER4A LTR ERV1 263 664 0 1997 108 22 0 chr10 3824979 3825280 -141764008 + AluSq SINE Alu 1 307 0 470 311 89 38 chr10 3825292 3825684 -141763604 - L2 LINE L2 -422 2892 2481 553 263 45 58 chr10 3825772 3825996 -141763292 + MLT1E LTR MaLR 27 247 -346 3578 148 45 54 chr10 3825996 3826573 -141762715 + L1MA8 LINE L1 5560 6130 -161 2336 139 55 0 chr10 3826573 3826955 -141762333 - MER57A LTR ERV1 0 403 1 3578 148 45 54 chr10 3826955 3827115 -141762173 + L1MA8 LINE L1 6130 6290 -1 245 244 0 39 chr10 3827115 3827185 -141762103 + MLT1E LTR MaLR 521 589 -4 809 291 128 5 chr10 3827191 3827580 -141761708 - L2 LINE L2 -940 2374 1938 345 123 12 37 chr10 3827691 3827772 -141761516 + (TTCTC)n Simple_repeat Simple_repeat 3 81 0 * 635 94 10 0 chr10 3827758 3827854 -141761434 + (TTCC)n Simple_repeat Simple_repeat 3 99 0 1494 193 43 3 chr10 3827867 3828167 -141761121 - AluJb SINE Alu 0 312 1 2001 114 0 35 chr10 3828528 3828845 -141760443 - AluY SINE Alu -5 306 1 1555 206 96 54 chr10 3828870 3829056 -141760232 + MLT2B2 LTR ERVL 3 180 -335 4565 125 25 10 chr10 3829056 3829737 -141759551 - LTR8 LTR ERV1 0 691 1 1555 206 96 54 chr10 3829737 3829977 -141759311 + MLT2B2 LTR ERVL 180 447 -68 186 43 0 0 chr10 3829980 3830003 -141759285 + (CATATA)n Simple_repeat Simple_repeat 5 27 0 215 170 0 19 chr10 3830003 3830056 -141759232 + (TG)n Simple_repeat Simple_repeat 2 53 0 391 351 83 12 chr10 3830100 3830268 -141759020 - HAL1 LINE L1 -1100 1407 1228 291 157 0 0 chr10 3830377 3830428 -141758860 + (CA)n Simple_repeat Simple_repeat 2 52 0 300 284 0 53 chr10 3830428 3830523 -141758765 + L1MC4 LINE L1 6610 6699 -1343 288 308 93 0 chr10 3830524 3830631 -141758657 + L2 LINE L2 3156 3272 0 22 0 0 0 chr10 3830677 3830699 -141758589 + AT_rich Low_complexity Low_complexity 1 22 0 609 293 96 76 chr10 3830978 3831177 -141758111 - HAL1 LINE L1 -900 1607 1413 1930 80 30 36 chr10 3831177 3831349 -141757939 - AluY SINE Alu -9 302 131 221 0 0 33 chr10 3831349 3831379 -141757909 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1930 80 30 36 chr10 3831379 3831508 -141757780 - AluY SINE Alu -180 131 3 609 293 96 76 chr10 3831508 3831755 -141757533 - HAL1 LINE L1 -1094 1413 1152 735 228 7 0 chr10 3832132 3832281 -141757007 + FRAM SINE Alu 9 158 -18 1955 112 0 4 chr10 3832289 3832603 -141756685 + AluSx SINE Alu 9 321 0 25 31 0 0 chr10 3832646 3832678 -141756610 + AT_rich Low_complexity Low_complexity 1 32 0 1206 99 0 6 chr10 3833747 3833918 -141755370 - AluSg/x SINE Alu -18 294 125 195 316 128 17 chr10 3833987 3834104 -141755184 + MIR SINE MIR 17 146 -62 216 0 0 0 chr10 3835870 3835894 -141753394 + (A)n Simple_repeat Simple_repeat 1 24 0 1143 176 118 123 chr10 3885955 3886371 -141702917 - MLT2D LTR ERVL 0 414 1 23 0 0 0 chr10 3886408 3886431 -141702857 + AT_rich Low_complexity Low_complexity 1 23 0 2168 142 0 0 chr10 3886603 3886906 -141702382 + AluSx SINE Alu 1 303 -9 212 261 15 15 chr10 3887004 3887069 -141702219 - MIR SINE MIR -107 101 37 372 274 122 16 chr10 3887527 3887848 -141701440 - L1ME4a LINE L1 -3 6118 5764 759 191 89 93 chr10 3887911 3888233 -141701055 + MLT1A2 LTR MaLR 6 300 -74 618 264 22 0 chr10 3888387 3888565 -141700723 - MER45 DNA AcHobo -856 184 3 1141 132 11 0 chr10 3890912 3891086 -141698202 - AluSq SINE Alu -4 309 134 2104 143 0 0 chr10 3891086 3891387 -141697901 - AluSp SINE Alu -12 301 1 395 305 32 13 chr10 3891943 3892097 -141697191 + MIR SINE MIR 21 177 -85 199 309 178 13 chr10 3892618 3892770 -141696518 - MER5A DNA MER1_type 0 189 13 2082 135 7 0 chr10 3892920 3893223 -141696065 - AluSx SINE Alu -7 305 1 300 277 84 34 chr10 3894182 3894301 -141694987 + MIR SINE MIR 137 261 -1 2288 115 0 3 chr10 3894636 3895004 -141694284 + AluSx SINE Alu 3 369 0 639 254 0 7 chr10 3895084 3895226 -141694062 - MER8 DNA MER2_type 0 239 99 332 325 37 47 chr10 3895777 3895968 -141693320 + MIR SINE MIR 29 217 -45 1272 256 49 23 chr10 3896317 3896664 -141692624 - MLT1A2 LTR MaLR -18 356 1 2708 169 62 108 chr10 3897046 3897257 -141692031 - LTR8A LTR ERV1 0 727 508 1991 149 10 3 chr10 3897257 3897565 -141691723 - AluSx SINE Alu -2 310 1 2708 169 62 108 chr10 3897565 3898114 -141691174 - LTR8A LTR ERV1 -219 508 2 482 333 34 19 chr10 3898319 3898583 -141690705 - LTR16A LTR ERVL -79 371 104 2580 113 8 3 chr10 3898633 3898995 -141690293 - THE1B LTR MaLR 0 364 1 725 230 288 25 chr10 3899267 3899781 -141689507 - LTR50 LTR ERVL -10 785 137 2128 136 7 3 chr10 3900001 3900311 -141688977 - AluSq SINE Alu -2 311 1 2089 120 23 3 chr10 3901271 3901570 -141687718 + AluSx SINE Alu 1 305 -7 504 0 0 0 chr10 3902595 3902651 -141686637 + (TTA)n Simple_repeat Simple_repeat 2 57 0 1796 148 24 10 chr10 3903956 3904253 -141685035 + AluSx SINE Alu 1 301 -11 1717 138 18 90 chr10 3905066 3905247 -141684041 - AluJo SINE Alu 0 312 164 2191 120 0 7 chr10 3905247 3905555 -141683733 - AluSg SINE Alu -4 306 1 1717 138 18 90 chr10 3905555 3905707 -141683581 - AluJo SINE Alu -148 164 3 416 282 8 8 chr10 3906902 3907019 -141682269 + Charlie8 DNA MER1_type 93 209 -2208 4109 126 21 11 chr10 3907225 3907854 -141681434 + MER41B LTR ERV1 1 635 0 228 323 72 60 chr10 3908042 3908209 -141681079 - MIR SINE MIR -55 207 39 1836 157 13 13 chr10 3908344 3908650 -141680638 + AluSx SINE Alu 1 306 -6 2338 105 0 6 chr10 3911043 3911358 -141677930 + AluSq SINE Alu 1 313 0 21 0 0 0 chr10 3912118 3912139 -141677149 + AT_rich Low_complexity Low_complexity 1 21 0 2070 134 0 3 chr10 3912142 3912447 -141676841 - AluSx SINE Alu -8 304 1 275 236 90 11 chr10 3912657 3912746 -141676542 + MER69 DNA AcHobo 99 194 -1032 927 221 43 59 chr10 3912808 3912935 -141676353 + MER69 DNA AcHobo 1457 1584 -942 1660 164 27 17 chr10 3912935 3913234 -141676054 + AluJo SINE Alu 1 302 -10 927 221 43 59 chr10 3913234 3913428 -141675860 + MER69 DNA AcHobo 1584 1773 -753 * 1524 251 70 13 chr10 3913420 3913950 -141675338 + MER69 DNA AcHobo 1959 2518 -8 2124 121 7 3 chr10 3913981 3914278 -141675010 - AluSg SINE Alu -12 298 1 199 218 135 113 chr10 3914785 3914918 -141674370 + L2 LINE L2 2727 2862 -452 24 0 0 0 chr10 3914918 3914942 -141674346 + AT_rich Low_complexity Low_complexity 1 24 0 2044 116 3 27 chr10 3914948 3915249 -141674039 - AluSx SINE Alu -18 294 1 186 304 163 11 chr10 3915445 3915537 -141673751 + L2 LINE L2 3196 3301 -12 392 0 21 0 chr10 3915698 3915746 -141673542 + (TTA)n Simple_repeat Simple_repeat 2 50 0 185 143 57 0 chr10 3915746 3915781 -141673507 - MIR SINE MIR -61 147 111 1743 151 7 11 chr10 3915885 3916164 -141673124 + AluJb SINE Alu 1 278 -34 1022 51 17 34 chr10 3916166 3916341 -141672947 + (GAAA)n Simple_repeat Simple_repeat 2 173 0 2125 120 3 0 chr10 3916525 3916817 -141672471 + AluSx SINE Alu 1 293 -19 182 321 54 36 chr10 3916835 3916947 -141672341 + MIR SINE MIR 30 143 -65 804 147 6 51 chr10 3916947 3916970 -141672318 + L1PA16 LINE L1 6018 6040 -126 1547 203 7 3 chr10 3916970 3917271 -141672017 + AluJo SINE Alu 1 302 -10 804 147 6 51 chr10 3917271 3917403 -141671885 + L1PA16 LINE L1 6040 6166 0 21 0 0 0 chr10 3917592 3917613 -141671675 + AT_rich Low_complexity Low_complexity 1 21 0 1562 205 7 4 chr10 3917740 3918038 -141671250 + AluJb SINE Alu 3 301 0 424 328 52 35 chr10 3919352 3919392 -141669896 - MLT1K LTR MaLR -5 583 545 1933 129 23 42 chr10 3919392 3919701 -141669587 - AluSq SINE Alu -10 303 1 424 328 52 35 chr10 3919701 3919889 -141669399 - MLT1K LTR MaLR -43 545 351 24 0 0 0 chr10 3920455 3920479 -141668809 + AT_rich Low_complexity Low_complexity 1 24 0 1477 164 4 9 chr10 3920479 3920705 -141668583 - AluSx SINE Alu -87 225 1 1439 134 5 0 chr10 3920707 3920923 -141668365 - AluSq SINE Alu -2 311 95 2102 149 3 0 chr10 3921660 3921968 -141667320 - AluSx SINE Alu -2 310 2 22 0 0 0 chr10 3922586 3922608 -141666680 + AT_rich Low_complexity Low_complexity 1 22 0 216 86 71 43 chr10 3922653 3922693 -141666595 + (TA)n Simple_repeat Simple_repeat 1 45 -27 1723 104 0 50 chr10 3922693 3922952 -141666336 - AluSc SINE Alu -19 290 45 216 86 71 43 chr10 3922952 3922981 -141666307 + (TA)n Simple_repeat Simple_repeat 45 72 0 1951 158 0 0 chr10 3924404 3924695 -141664593 + AluSx SINE Alu 1 291 -21 222 128 0 0 chr10 3924950 3924989 -141664299 + (CA)n Simple_repeat Simple_repeat 1 39 0 22 35 0 0 chr10 3925218 3925247 -141664041 + AT_rich Low_complexity Low_complexity 1 29 0 2433 64 0 10 chr10 3925825 3926120 -141663168 + AluY SINE Alu 1 292 -19 2289 169 14 43 chr10 3926961 3927094 -141662194 + MSTC LTR MaLR 2 137 -291 949 125 0 18 chr10 3927094 3927262 -141662026 + (TTTC)n Simple_repeat Simple_repeat 4 168 0 1996 139 0 0 chr10 3927262 3927542 -141661746 - AluSx SINE Alu -32 280 1 2289 169 14 43 chr10 3927542 3927845 -141661443 + MSTC LTR MaLR 135 426 -2 213 206 48 16 chr10 3929257 3929320 -141659968 + (CAGGG)n Simple_repeat Simple_repeat 2 66 0 230 271 43 50 chr10 3929905 3930045 -141659243 - MIR3 SINE MIR -62 146 8 808 189 0 0 chr10 3930627 3930759 -141658529 - THE1C LTR MaLR -243 132 1 198 0 0 0 chr10 3930924 3930946 -141658342 + (TC)n Simple_repeat Simple_repeat 2 23 0 187 236 125 28 chr10 3930988 3931060 -141658228 - L2 LINE L2 -20 3252 3174 2011 130 34 0 chr10 3931410 3931703 -141657585 - AluSx SINE Alu -9 303 1 792 190 72 5 chr10 3933540 3933735 -141655553 + MSTA LTR MaLR 1 208 -220 1963 107 66 19 chr10 3933764 3934083 -141655205 + MSTA LTR MaLR 95 428 0 345 266 98 60 chr10 3934160 3934666 -141654622 + L2 LINE L2 2646 3165 -148 1017 112 0 0 chr10 3935454 3935588 -141653700 + AluSg SINE Alu 1 134 -176 2552 63 0 0 chr10 3935588 3935887 -141653401 + AluY SINE Alu 1 299 -12 1751 191 16 22 chr10 3935958 3936325 -141652963 + MLT1A1 LTR MaLR 1 365 0 615 165 61 9 chr10 3936683 3936798 -141652490 - AluJo SINE Alu -176 136 16 2059 134 3 0 chr10 3937085 3937368 -141651920 + AluSx SINE Alu 6 289 -23 2691 185 25 10 chr10 3937401 3937920 -141651368 + L1MA9 LINE L1 5783 6309 -3 25 31 0 0 chr10 3937923 3937955 -141651333 + AT_rich Low_complexity Low_complexity 1 32 0 1911 145 3 0 chr10 3938730 3939193 -141650095 + AluSx SINE Alu 7 470 0 209 143 0 41 chr10 3939197 3939246 -141650042 + (GGAA)n Simple_repeat Simple_repeat 3 49 0 863 98 0 38 chr10 3940917 3941101 -141648187 + (CCCTAA)n Simple_repeat Simple_repeat 2 178 0 462 237 102 80 chr10 3941191 3941267 -141648021 - MLT1J LTR MaLR -4 507 434 1974 142 0 57 chr10 3941267 3941598 -141647690 - AluSx SINE Alu 0 312 1 462 237 102 80 chr10 3941598 3941795 -141647493 - MLT1J LTR MaLR -77 434 228 2484 77 3 0 chr10 3942311 3942611 -141646677 - AluSp SINE Alu -12 301 1 182 138 0 0 chr10 3942634 3942663 -141646625 - L2 LINE L2 0 3272 3244 247 266 13 0 chr10 3943492 3943571 -141645717 + (AATAG)n Simple_repeat Simple_repeat 4 83 0 656 216 15 26 chr10 3943732 3944077 -141645211 + CT-rich Low_complexity Low_complexity 1 340 0 26 0 0 0 chr10 3944333 3944359 -141644929 + AT_rich Low_complexity Low_complexity 1 26 0 215 215 92 15 chr10 3944471 3944536 -141644752 - L2 LINE L2 -62 3251 3182 369 251 20 29 chr10 3944572 3944685 -141644603 + L1MC1 LINE L1 6216 6329 -15 1965 154 3 0 chr10 3944685 3944996 -141644292 + AluJb SINE Alu 1 312 0 369 251 20 29 chr10 3944996 3945011 -141644277 + L1MC1 LINE L1 6329 6343 -1 260 211 218 30 chr10 3945414 3945547 -141643741 - L1ME3 LINE L1 -2 6160 6003 388 273 12 37 chr10 3945842 3946003 -141643285 + MIR SINE MIR 59 215 -47 225 0 0 0 chr10 3946384 3946409 -141642879 + (T)n Simple_repeat Simple_repeat 1 25 0 1123 211 4 4 chr10 3947344 3947571 -141641717 + L1PA15 LINE L1 5939 6165 0 21 0 0 0 chr10 3948137 3948158 -141641130 + AT_rich Low_complexity Low_complexity 1 21 0 668 257 19 10 chr10 3948485 3948691 -141640597 + MIR SINE MIR 41 248 -14 2289 113 3 0 chr10 3948697 3948998 -141640290 - AluSx SINE Alu -10 302 1 342 228 0 38 chr10 3949558 3949637 -141639651 - MLT1G LTR MaLR -474 81 6 5950 168 16 8 chr10 3950127 3951474 -141637814 + L1PA8 LINE L1 4819 6172 0 207 0 0 0 chr10 3952057 3952080 -141637208 + (T)n Simple_repeat Simple_repeat 1 23 0 1729 119 65 25 chr10 3953436 3953713 -141635575 - AluJo SINE Alu -24 288 1 2084 127 0 0 chr10 3954090 3954410 -141634878 - AluSq SINE Alu 0 320 1 2071 107 37 0 chr10 3955818 3956116 -141633172 - AluY SINE Alu -2 309 1 201 39 0 0 chr10 3956178 3956204 -141633084 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 257 319 80 0 chr10 3958596 3958709 -141630579 + MIR SINE MIR 119 240 -22 302 295 137 18 chr10 3958709 3959045 -141630243 - LTR16A LTR ERVL -4 446 71 22 0 0 0 chr10 3959692 3959714 -141629574 + AT_rich Low_complexity Low_complexity 1 22 0 1535 203 3 13 chr10 3960482 3960787 -141628501 - AluJo SINE Alu -10 302 1 628 313 127 17 chr10 3961812 3962231 -141627057 + MER69 DNA AcHobo 120 584 -642 * 1235 218 56 28 chr10 3962224 3962386 -141626902 + MER69 DNA AcHobo 2026 2182 -344 1857 167 0 3 chr10 3962386 3962686 -141626602 - AluJo SINE Alu -13 299 1 1235 218 56 28 chr10 3962686 3962949 -141626339 + MER69 DNA AcHobo 2182 2463 -63 336 302 54 0 chr10 3963596 3963725 -141625563 + L2 LINE L2 3173 3308 -5 285 316 177 69 chr10 3963766 3964344 -141624944 - L3 LINE CR1 -50 1527 856 2139 104 10 3 chr10 3964344 3964633 -141624655 - AluSg SINE Alu -19 291 1 285 316 177 69 chr10 3964633 3964767 -141624521 - L3 LINE CR1 -721 856 738 267 214 0 0 chr10 3964911 3964967 -141624321 - L2 LINE L2 -1 3312 3257 709 267 37 31 chr10 3965144 3965466 -141623822 + MER5C DNA MER1_type 1 324 0 2103 115 44 0 chr10 3965522 3965818 -141623470 - AluSg SINE Alu -1 309 1 230 318 30 0 chr10 3965994 3966060 -141623228 + L2 LINE L2 3205 3272 0 3160 170 22 74 chr10 3967106 3967835 -141621453 + LTR8 LTR ERV1 1 691 0 2154 103 3 3 chr10 3968450 3968740 -141620548 - AluSc SINE Alu -19 290 1 981 316 95 52 chr10 3969566 3970315 -141618973 + L2 LINE L2 1851 2631 -683 223 274 41 0 chr10 3970713 3970786 -141618502 - L2 LINE L2 -568 2746 2671 2202 153 23 8 chr10 3971839 3972193 -141617095 + THE1B LTR MaLR 5 363 -1 201 39 0 0 chr10 3975346 3975372 -141613916 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1402 245 114 38 chr10 3975770 3976244 -141613044 - MLT2B1 LTR ERVL -10 510 1 548 296 90 31 chr10 3976543 3976898 -141612390 + L1ME4a LINE L1 5508 5883 -238 1847 71 8 4 chr10 3977189 3977428 -141611860 + AluY SINE Alu 56 295 -16 3950 156 13 15 chr10 3977553 3978239 -141611049 + L1MA6 LINE L1 5616 6300 0 2212 109 0 20 chr10 3978301 3978604 -141610684 + AluSg SINE Alu 1 297 -13 313 295 0 27 chr10 3979586 3979698 -141609590 + MIR SINE MIR 152 260 -2 217 288 85 8 chr10 3980920 3981038 -141608250 + MIR SINE MIR 102 228 -34 486 332 25 20 chr10 3981190 3981392 -141607896 - MIR SINE MIR -48 214 12 997 155 54 0 chr10 3981756 3981924 -141607364 - AluJ SINE Alu -26 286 110 523 184 18 28 chr10 3982011 3982120 -141607168 - AluJ SINE Alu -203 109 2 349 207 27 0 chr10 3984818 3984929 -141604359 + C-rich Low_complexity Low_complexity 2 115 0 1484 154 91 58 chr10 3986805 3987168 -141602120 + THE1C LTR MaLR 1 375 0 2787 63 0 0 chr10 3987534 3987881 -141601407 - L1PA8 LINE L1 -4 6168 5822 392 35 0 221 chr10 3988234 3988320 -141600968 + MADE1 DNA Mariner 14 80 0 313 321 8 15 chr10 3988755 3988889 -141600399 - L2 LINE L2 -650 2664 2532 264 228 36 0 chr10 3988915 3989116 -141600172 + (TA)n Simple_repeat Simple_repeat 1 208 0 1778 167 37 0 chr10 3989127 3989427 -141599861 - AluSx SINE Alu -1 311 1 327 284 55 40 chr10 3989460 3989661 -141599627 - L2 LINE L2 -829 2485 2282 213 326 12 0 chr10 3990188 3990274 -141599014 - L2 LINE L2 -527 2787 2701 22 0 0 0 chr10 3990738 3990760 -141598528 + AT_rich Low_complexity Low_complexity 1 22 0 2116 115 18 0 chr10 3990767 3991053 -141598235 + AluSc SINE Alu 3 293 -16 195 300 108 33 chr10 3991560 3991680 -141597608 - MIR SINE MIR -74 188 60 25 0 0 0 chr10 3992557 3992582 -141596706 + AT_rich Low_complexity Low_complexity 1 25 0 335 210 25 76 chr10 3992717 3992836 -141596452 - Looper DNA T2_type -3 1555 1443 692 269 151 45 chr10 3992881 3993396 -141595892 + MLT1F1 LTR MaLR 1 565 -2 263 316 71 7 chr10 3993403 3993558 -141595730 - L1ME1 LINE L1 -4 6162 5998 1712 266 48 27 chr10 3993567 3994194 -141595094 - Looper DNA T2_type -782 776 137 424 204 79 130 chr10 3994191 3994263 -141595025 - Looper DNA T2_type -1343 215 141 * 1656 198 3 3 chr10 3994263 3994556 -141594732 - AluJb SINE Alu -19 293 1 424 204 79 130 chr10 3994556 3994699 -141594589 - Looper DNA T2_type -1417 141 11 1834 116 31 48 chr10 3995363 3995655 -141593633 + AluSx SINE Alu 8 294 -18 2390 78 7 0 chr10 3995655 3995951 -141593337 + AluY SINE Alu 1 298 -13 23 0 0 0 chr10 3996427 3996450 -141592838 + AT_rich Low_complexity Low_complexity 1 23 0 2270 90 13 13 chr10 3997894 3998205 -141591083 - AluSx SINE Alu -1 311 1 394 169 0 0 chr10 3999184 3999249 -141590039 - MER46A DNA MER2_type -2 234 170 1124 158 0 6 chr10 3999357 3999534 -141589754 - MER46A DNA MER2_type -60 176 1 447 241 6 63 chr10 3999645 3999819 -141589469 - MIR SINE MIR -11 251 88 610 257 94 62 chr10 4000480 4000854 -141588434 + L2 LINE L2 2920 3305 -8 391 178 14 14 chr10 4000938 4001011 -141588277 + MER63 DNA MER1_type 660 732 -328 1026 160 0 0 chr10 4001172 4001349 -141587939 + AluSg/x SINE Alu 135 311 0 264 349 47 0 chr10 4001409 4001558 -141587730 - MIR SINE MIR -49 213 58 492 329 18 9 chr10 4001792 4002020 -141587268 + MIR SINE MIR 33 262 0 252 258 21 75 chr10 4002416 4002509 -141586779 - MIR SINE MIR -102 160 73 318 26 0 0 chr10 4002724 4002763 -141586525 + (TAA)n Simple_repeat Simple_repeat 1 39 0 2212 112 0 0 chr10 4002769 4003056 -141586232 + AluSq SINE Alu 1 287 -26 4628 204 29 19 chr10 4003064 4004585 -141584703 - L1MA9 LINE L1 -28 6284 4747 1524 166 48 37 chr10 4004585 4004880 -141584408 - AluJb SINE Alu -14 298 1 4628 204 29 19 chr10 4004880 4004931 -141584357 - L1MA9 LINE L1 -1565 4747 4698 2111 130 0 0 chr10 4006642 4006934 -141582354 - AluSx SINE Alu -18 294 3 22 0 0 0 chr10 4006938 4006960 -141582328 + AT_rich Low_complexity Low_complexity 1 22 0 1984 146 0 22 chr10 4007217 4007533 -141581755 + AluSp SINE Alu 1 309 -4 26 30 0 0 chr10 4008927 4008960 -141580328 + AT_rich Low_complexity Low_complexity 1 33 0 2053 148 0 0 chr10 4009593 4009891 -141579397 - AluSx SINE Alu -14 298 1 2522 226 32 26 chr10 4010487 4010588 -141578700 - L1M4 LINE L1 -1081 5065 4966 1522 113 13 17 chr10 4010588 4010711 -141578577 + MER30 DNA MER1_type 1 124 -106 2390 87 0 0 chr10 4010711 4011009 -141578279 - AluSg SINE Alu -12 298 1 1522 113 13 17 chr10 4011009 4011116 -141578172 + MER30 DNA MER1_type 124 230 0 2522 226 32 26 chr10 4011116 4011757 -141577531 - L1M4 LINE L1 -1180 4966 4318 459 0 0 0 chr10 4011771 4011822 -141577466 + (TA)n Simple_repeat Simple_repeat 2 52 0 1189 102 0 0 chr10 4011824 4011971 -141577317 - AluSq/x SINE Alu -161 152 6 816 268 7 48 chr10 4011974 4012265 -141577023 - L1M4 LINE L1 -1821 4325 4047 23 0 0 0 chr10 4012382 4012405 -141576883 + AT_rich Low_complexity Low_complexity 1 23 0 919 111 0 15 chr10 4013347 4013482 -141575806 - AluSq/x SINE Alu -179 133 1 559 211 0 0 chr10 4014481 4014595 -141574693 + L1MA5A LINE L1 6179 6292 -5 397 187 0 44 chr10 4015719 4015810 -141573478 + Charlie8 DNA MER1_type 84 170 -2247 191 285 76 83 chr10 4016342 4016486 -141572802 + MIR SINE MIR 81 223 -39 2320 117 0 0 chr10 4018787 4019095 -141570193 - AluSc SINE Alu -1 308 1 186 324 40 14 chr10 4020614 4020688 -141568600 - MIR SINE MIR -69 193 118 629 271 86 51 chr10 4020795 4021223 -141568065 + MLT1J1 LTR MaLR 4 446 0 267 326 30 15 chr10 4021475 4021607 -141567681 - MIR SINE MIR -66 196 63 1984 123 36 10 chr10 4021680 4021981 -141567307 - AluSg SINE Alu -1 309 1 180 158 0 0 chr10 4022142 4022180 -141567108 + (TG)n Simple_repeat Simple_repeat 1 38 0 732 140 0 0 chr10 4022789 4022903 -141566385 - FLAM_C SINE Alu -15 118 5 2156 122 0 3 chr10 4022913 4023216 -141566072 - AluSx SINE Alu -10 302 1 189 0 0 0 chr10 4023228 4023249 -141566039 + (TAG)n Simple_repeat Simple_repeat 1 21 0 475 279 65 30 chr10 4024621 4024822 -141564466 + MER3 DNA MER1_type 2 209 0 468 145 15 30 chr10 4025292 4025423 -141563865 + CT-rich Low_complexity Low_complexity 4 132 0 514 206 5 33 chr10 4025460 4025644 -141563644 + C-rich Low_complexity Low_complexity 1 179 0 248 233 0 42 chr10 4025617 4025737 -141563551 + CT-rich Low_complexity Low_complexity 3 117 0 * 296 127 18 0 chr10 4025806 4025861 -141563427 + CT-rich Low_complexity Low_complexity 4 59 0 21 36 0 0 chr10 4027851 4027879 -141561409 + AT_rich Low_complexity Low_complexity 1 28 0 2116 139 7 0 chr10 4028117 4028427 -141560861 + AluSx SINE Alu 1 312 0 1792 213 11 8 chr10 4028595 4028957 -141560331 + MLT1A1 LTR MaLR 2 364 -1 248 320 13 0 chr10 4029684 4029759 -141559529 + L2 LINE L2 2863 2938 -376 700 255 45 25 chr10 4031016 4031216 -141558072 + MER20 DNA MER1_type 16 219 0 189 217 19 38 chr10 4031256 4031413 -141557875 + (TA)n Simple_repeat Simple_repeat 2 155 0 1042 83 0 0 chr10 4031564 4031696 -141557592 - AluSp/q SINE Alu -20 293 162 1213 195 77 49 chr10 4032036 4032323 -141556965 - AluJb SINE Alu -1 311 17 2119 92 20 31 chr10 4032599 4032892 -141556396 + AluSq SINE Alu 1 290 -23 221 0 0 33 chr10 4032895 4032925 -141556363 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1983 174 33 12 chr10 4033237 4033798 -141555490 - L1P5 LINE L1 -601 5555 4977 1934 152 40 0 chr10 4035148 4035444 -141553844 + AluSx SINE Alu 1 308 -4 25 51 0 0 chr10 4036152 4036191 -141553097 + AT_rich Low_complexity Low_complexity 1 39 0 310 255 113 0 chr10 4036780 4036886 -141552402 - MIR3 SINE MIR 0 208 91 2381 56 0 11 chr10 4038194 4038538 -141550750 + AluY SINE Alu 1 341 0 26 50 0 0 chr10 4042634 4042674 -141546614 + AT_rich Low_complexity Low_complexity 1 40 0 2057 112 11 0 chr10 4043264 4043550 -141545738 + AluSq SINE Alu 1 289 -24 273 57 0 0 chr10 4043554 4043589 -141545699 + (TG)n Simple_repeat Simple_repeat 2 36 0 453 141 0 0 chr10 4043589 4043662 -141545626 + (TA)n Simple_repeat Simple_repeat 1 73 0 255 173 0 0 chr10 4043665 4043717 -141545571 + LTR66 LTR ERVL 404 455 -155 1779 132 50 21 chr10 4044820 4045101 -141544187 - AluSx SINE Alu -23 289 1 382 335 29 50 chr10 4045523 4045765 -141543523 - MIR SINE MIR -17 245 9 198 71 0 0 chr10 4048325 4048353 -141540935 + (TG)n Simple_repeat Simple_repeat 2 29 0 1985 134 14 0 chr10 4048396 4048717 -141540571 + AluSx SINE Alu 1 325 0 1511 240 170 23 chr10 4049088 4049916 -141539372 - Charlie2 DNA MER1_type -43 2819 1870 1729 240 63 58 chr10 4051062 4051132 -141538156 - MER69 DNA AcHobo -10 2516 2448 1945 147 3 3 chr10 4051132 4051425 -141537863 + AluSx SINE Alu 1 293 -19 1729 240 63 58 chr10 4051425 4052415 -141536873 - MER69 DNA AcHobo -78 2448 1451 344 268 71 9 chr10 4052822 4052934 -141536354 - MER69 DNA AcHobo -868 358 240 1186 225 58 36 chr10 4053120 4053449 -141535839 - MLT1A2 LTR MaLR -18 356 21 21 36 0 0 chr10 4053534 4053562 -141535726 + AT_rich Low_complexity Low_complexity 1 28 0 1467 208 48 14 chr10 4053566 4053860 -141535428 + AluJo SINE Alu 1 304 -8 228 269 26 39 chr10 4054737 4054815 -141534473 - MLT1F1-int LTR MaLR -508 863 787 420 309 34 11 chr10 4055212 4055390 -141533898 - MLT1F1-int LTR MaLR -882 489 308 1216 277 136 14 chr10 4055544 4056045 -141533243 - MLT1F1 LTR MaLR -5 562 1 184 292 62 15 chr10 4056527 4056592 -141532696 + L2 LINE L2 3208 3275 -38 1350 180 30 26 chr10 4057530 4057797 -141531491 - MLT1B LTR MaLR -122 268 1 2034 151 0 0 chr10 4058185 4058484 -141530804 - AluSx SINE Alu -12 300 2 839 113 48 0 chr10 4059202 4059326 -141529962 + AluSq/x SINE Alu 4 133 -180 204 97 0 0 chr10 4059329 4059360 -141529928 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 262 414 9 0 chr10 4060244 4060360 -141528928 + L2 LINE L2 3151 3267 -5 2343 100 0 0 chr10 4060395 4060695 -141528593 - AluSx SINE Alu -12 300 1 239 114 0 0 chr10 4063207 4063242 -141526046 - MIR SINE MIR -109 153 119 901 207 98 37 chr10 4063265 4063511 -141525777 - MIR SINE MIR -1 261 1 21 0 0 0 chr10 4065392 4065413 -141523875 + AT_rich Low_complexity Low_complexity 1 21 0 707 219 0 0 chr10 4065413 4065527 -141523761 - FLAM_A SINE Alu -19 114 1 412 294 82 39 chr10 4065539 4065894 -141523394 + L1ME4a LINE L1 5567 5933 -188 255 61 0 0 chr10 4066054 4066087 -141523201 + (TA)n Simple_repeat Simple_repeat 1 33 0 265 333 12 0 chr10 4066244 4066328 -141522960 - MIR SINE MIR -137 125 41 1894 132 81 31 chr10 4066834 4067191 -141522097 - THE1C LTR MaLR 0 375 1 277 269 82 74 chr10 4067901 4068157 -141521131 + L1MEd LINE L1 602 859 -5260 40 37 0 0 chr10 4068178 4068232 -141521056 + AT_rich Low_complexity Low_complexity 1 54 0 242 213 16 47 chr10 4068234 4068361 -141520927 + (TTA)n Simple_repeat Simple_repeat 3 125 0 2253 112 0 10 chr10 4068506 4068809 -141520479 - AluSc SINE Alu -9 300 1 265 297 42 8 chr10 4068809 4068927 -141520361 + L1MEd LINE L1 902 1023 -5096 314 273 116 41 chr10 4069046 4069365 -141519923 + L1MEd LINE L1 1223 1565 -4745 320 321 21 7 chr10 4070162 4070302 -141518986 + L1MEd LINE L1 2126 2267 -3862 281 281 91 40 chr10 4070413 4070612 -141518676 + L1MEd LINE L1 2294 2502 -3627 230 349 116 0 chr10 4070658 4070830 -141518458 + MIR SINE MIR 71 262 0 2180 136 0 0 chr10 4072082 4072390 -141516898 + AluSx SINE Alu 1 308 -4 443 187 19 65 chr10 4072576 4072683 -141516605 - MER5B DNA MER1_type -74 104 3 29 78 0 0 chr10 4073669 4073733 -141515555 + AT_rich Low_complexity Low_complexity 1 64 0 22 0 0 0 chr10 4073789 4073811 -141515477 + AT_rich Low_complexity Low_complexity 1 22 0 289 344 68 68 chr10 4073854 4074249 -141515039 - L2 LINE L2 0 3313 2919 320 226 15 22 chr10 4075535 4075672 -141513616 + (TG)n Simple_repeat Simple_repeat 1 136 0 243 0 0 0 chr10 4075873 4075900 -141513388 + (T)n Simple_repeat Simple_repeat 1 27 0 2712 201 60 11 chr10 4076787 4077353 -141511935 - LTR51 LTR ERV1 -77 594 1 746 151 0 13 chr10 4078144 4078303 -141510985 + (TTAGGG)n Simple_repeat Simple_repeat 4 160 0 190 349 92 42 chr10 4078478 4078716 -141510572 - L2 LINE L2 -1273 2041 1792 668 251 0 6 chr10 4079111 4079278 -141510010 + MER104 DNA Tc2 14 179 -1 594 179 32 49 chr10 4080824 4080947 -141508341 - FLAM_C SINE Alu -19 124 4 759 224 21 47 chr10 4082204 4082262 -141507026 - AluJo SINE Alu -125 187 129 1494 103 3 94 chr10 4082262 4082614 -141506674 - AluSc SINE Alu 0 309 1 759 224 21 47 chr10 4082614 4082747 -141506541 - AluJo SINE Alu -183 129 1 229 163 20 0 chr10 4082748 4082797 -141506491 - L1MCc LINE L1 -5076 1865 1816 * 3040 251 54 4 chr10 4082794 4083794 -141505494 + L1ME3A LINE L1 3791 4840 -1306 934 157 13 0 chr10 4085166 4085319 -141503969 - AluSg/x SINE Alu -4 306 152 370 265 160 6 chr10 4085969 4086150 -141503138 + L2 LINE L2 3102 3310 -3 23 0 0 0 chr10 4086288 4086311 -141502977 + AT_rich Low_complexity Low_complexity 1 23 0 2226 317 84 34 chr10 4086801 4088176 -141501112 - L2 LINE L2 -811 2503 1059 262 254 82 9 chr10 4088179 4088289 -141500999 + HAL1 LINE L1 839 956 -1551 203 374 61 0 chr10 4088756 4088855 -141500433 + L2 LINE L2 3106 3210 -62 832 287 43 30 chr10 4088872 4089196 -141500092 + L1ME3A LINE L1 4960 5278 -884 1440 201 0 42 chr10 4089196 4089504 -141499784 - AluJo SINE Alu -17 295 1 832 287 43 30 chr10 4089504 4089996 -141499292 + L1ME3A LINE L1 5278 5789 -373 500 230 49 75 chr10 4090029 4090255 -141499033 + L1ME3A LINE L1 5942 6161 -9 27 0 0 0 chr10 4090900 4090927 -141498361 + AT_rich Low_complexity Low_complexity 1 27 0 190 269 239 0 chr10 4091406 4091473 -141497815 - L3b LINE CR1 -71 1512 1430 3150 67 24 40 chr10 4092018 4092469 -141496819 + MLT2A1 LTR ERVL 1 444 0 1294 250 118 34 chr10 4092576 4092994 -141496294 - L1MCc LINE L1 -4889 1534 1188 1272 211 157 59 chr10 4092994 4093505 -141495783 - MER34B LTR ERV1 0 565 5 1294 250 118 34 chr10 4093505 4093947 -141495341 - L1MCc LINE L1 -5235 1188 784 838 243 57 24 chr10 4094202 4094572 -141494716 - L1MCc LINE L1 -6025 398 17 280 283 130 22 chr10 4094891 4095121 -141494167 - L1M2 LINE L1 -744 5556 5302 201 39 0 0 chr10 4095262 4095288 -141494000 + (T)n Simple_repeat Simple_repeat 1 26 0 339 326 22 17 chr10 4095649 4095679 -141493609 - L1M4 LINE L1 -1089 5057 5029 1824 108 93 0 chr10 4095679 4095948 -141493340 - AluSx SINE Alu -18 294 1 339 326 22 17 chr10 4095948 4096095 -141493193 - L1M4 LINE L1 -1117 5029 4879 843 323 87 40 chr10 4096116 4096977 -141492311 - L1M4 LINE L1 -1331 4815 3914 468 305 316 21 chr10 4097049 4097566 -141491722 + L2 LINE L2 1132 1495 -1819 2149 127 0 3 chr10 4097566 4097866 -141491422 - AluSx SINE Alu -13 299 1 468 305 316 21 chr10 4097866 4097931 -141491357 + L2 LINE L2 1495 1886 -1428 968 316 169 50 chr10 4097945 4098780 -141490508 + L2 LINE L2 2140 3108 -205 2263 102 0 3 chr10 4098780 4099083 -141490205 - AluSx SINE Alu -10 302 1 968 316 169 50 chr10 4099083 4099294 -141489994 + L2 LINE L2 3108 3292 -21 675 331 38 44 chr10 4099333 4099856 -141489432 - L1M4 LINE L1 -2375 3771 3252 1908 192 67 23 chr10 4099938 4100459 -141488829 + L1MB3 LINE L1 5636 6179 -4 300 279 84 45 chr10 4100668 4100822 -141488466 - L1M4 LINE L1 -3146 3000 2841 293 122 0 0 chr10 4100914 4100963 -141488325 - L1MA9 LINE L1 -38 6274 6226 2879 111 45 189 chr10 4101082 4102000 -141487288 - LTR1 LTR ERV1 0 785 1 294 272 29 10 chr10 4102027 4102130 -141487158 - L1MA9 LINE L1 -164 6148 6044 25 51 0 0 chr10 4102251 4102290 -141486998 + AT_rich Low_complexity Low_complexity 1 39 0 36 64 0 0 chr10 4105017 4105064 -141484224 + AT_rich Low_complexity Low_complexity 1 47 0 1000 155 6 0 chr10 4105064 4105225 -141484063 - AluSg/x SINE Alu -1 311 150 289 325 60 17 chr10 4106348 4106465 -141482823 - L2 LINE L2 0 3313 3192 1471 201 34 20 chr10 4106469 4106872 -141482416 + L1MB3 LINE L1 5271 5669 -514 830 176 19 6 chr10 4106875 4107034 -141482254 + FRAM SINE Alu 1 158 -18 1831 206 91 2 chr10 4107044 4107516 -141481772 + L1MB3 LINE L1 5662 6175 -8 270 271 98 57 chr10 4107634 4107756 -141481532 - L2 LINE L2 -243 3029 2903 1039 128 137 0 chr10 4108567 4108771 -141480517 + L1M2 LINE L1 5558 5789 -502 232 203 0 17 chr10 4109551 4109610 -141479678 + (TA)n Simple_repeat Simple_repeat 1 58 0 186 43 0 0 chr10 4109637 4109649 -141479639 + (CA)n Simple_repeat Simple_repeat 1 35 0 186 43 0 0 chr10 4109649 4109672 -141479616 + (CA)n Simple_repeat Simple_repeat 2 24 0 210 143 0 0 chr10 4109739 4109774 -141479514 + (CATATA)n Simple_repeat Simple_repeat 2 36 0 747 269 12 64 chr10 4110328 4110577 -141478711 + L2 LINE L2 3078 3313 0 2317 113 0 0 chr10 4112081 4112391 -141476897 - AluSx SINE Alu 0 312 3 207 88 0 0 chr10 4112525 4112559 -141476729 + (A)n Simple_repeat Simple_repeat 1 34 0 296 297 80 14 chr10 4112582 4112720 -141476568 + MIR SINE MIR 82 228 -34 362 332 98 4 chr10 4113373 4113647 -141475641 + HsTC2 DNA Tc2 578 877 -1021 2198 106 0 0 chr10 4113824 4114161 -141475127 - AluSq SINE Alu 0 337 1 208 246 53 0 chr10 4116395 4116452 -141472836 + MIR SINE MIR 108 167 -95 264 250 50 70 chr10 4116473 4116573 -141472715 + L2 LINE L2 3211 3308 -5 234 326 47 0 chr10 4117007 4117093 -141472195 + L2 LINE L2 3150 3239 -33 2009 128 59 9 chr10 4117772 4118093 -141471195 - MER1B DNA MER1_type 0 337 1 2099 100 4 0 chr10 4119133 4119446 -141469842 + AluSg SINE Alu 1 314 0 477 312 69 26 chr10 4120922 4121111 -141468177 + MIR SINE MIR 2 198 -64 1433 228 39 15 chr10 4121411 4121749 -141467539 - MSTD LTR MaLR -50 346 1 1459 129 133 33 chr10 4122498 4122769 -141466519 - AluSg SINE Alu -12 298 1 1940 162 0 0 chr10 4123542 4123844 -141465444 + AluSx SINE Alu 6 307 -5 252 299 95 7 chr10 4124265 4124402 -141464886 + L1ME LINE L1 5514 5662 -502 528 313 83 25 chr10 4125291 4125569 -141463719 + HAL1 LINE L1 793 1086 -1421 275 224 59 0 chr10 4125624 4125709 -141463579 - L1MC2 LINE L1 -9 6335 6246 2371 63 10 20 chr10 4125772 4126073 -141463215 + AluY SINE Alu 5 302 -9 1272 242 72 14 chr10 4126179 4126691 -141462597 + L1M4 LINE L1 2965 3506 -2640 4422 206 154 57 chr10 4126716 4126773 -141462515 - L1MCa LINE L1 -4489 1937 1887 1635 166 7 18 chr10 4126773 4127050 -141462238 - AluJo SINE Alu 0 312 39 4422 206 154 57 chr10 4127050 4128725 -141460563 - L1MCa LINE L1 -4539 1887 37 479 282 136 84 chr10 4128786 4129300 -141459988 + HAL1 LINE L1 1088 1628 -879 180 176 0 0 chr10 4129800 4129834 -141459454 + GA-rich Low_complexity Low_complexity 3 36 0 674 178 24 17 chr10 4129847 4130463 -141458825 + GA-rich Low_complexity Low_complexity 1 619 0 387 0 0 0 chr10 4131501 4131544 -141457744 + (TA)n Simple_repeat Simple_repeat 1 43 0 183 42 0 0 chr10 4131544 4131568 -141457720 + (TG)n Simple_repeat Simple_repeat 2 25 0 2209 126 0 3 chr10 4132630 4132940 -141456348 + AluSx SINE Alu 1 309 -3 193 278 19 0 chr10 4133268 4133322 -141455966 + MIR SINE MIR 83 137 -71 2002 137 3 0 chr10 4133747 4134032 -141455256 - AluSx SINE Alu -26 286 1 4642 174 24 1 chr10 4135086 4135891 -141453397 + Tigger1 DNA MER2_type 1 823 -1595 3420 135 107 0 chr10 4135894 4136463 -141452825 + Tigger1 DNA MER2_type 1789 2418 0 2506 58 0 13 chr10 4136749 4137057 -141452231 + AluY SINE Alu 1 304 -7 456 276 62 67 chr10 4137357 4137698 -141451590 - MLT1G1 LTR MaLR -252 343 5 2079 115 0 11 chr10 4137880 4138204 -141451084 + AluSx SINE Alu 1 321 0 2450 185 85 39 chr10 4138454 4138962 -141450326 + LTR26B LTR ERV1 1 531 0 460 188 152 94 chr10 4139042 4139218 -141450070 + MLT1E1 LTR MaLR 1 194 -430 4853 107 1 65 chr10 4139218 4139779 -141449509 - LTR8 LTR ERV1 0 691 187 1973 121 32 4 chr10 4139779 4140059 -141449229 + AluSx SINE Alu 1 288 -24 4853 107 1 65 chr10 4140059 4140235 -141449053 - LTR8 LTR ERV1 -504 187 1 460 188 152 94 chr10 4140235 4140282 -141449006 + MLT1E1 LTR MaLR 194 237 -387 1791 203 62 52 chr10 4141078 4141296 -141447992 - LTR54 LTR ERV1 -3 507 293 3403 128 91 0 chr10 4141296 4141804 -141447484 + MER41C LTR ERV1 1 554 0 1791 203 62 52 chr10 4141804 4142087 -141447201 - LTR54 LTR ERV1 -217 293 1 1801 130 22 4 chr10 4142992 4143269 -141446019 - AluSx SINE Alu -30 282 1 288 274 0 24 chr10 4143883 4143967 -141445321 - L1MC4 LINE L1 -1347 6695 6614 203 235 0 15 chr10 4143968 4144036 -141445252 + (TATATG)n Simple_repeat Simple_repeat 2 68 0 357 24 0 0 chr10 4144067 4144109 -141445179 + (TG)n Simple_repeat Simple_repeat 2 43 0 1360 216 17 3 chr10 4144521 4144808 -141444480 - L1MB5 LINE L1 0 6174 5884 2181 99 3 3 chr10 4144905 4145221 -141444067 + AluSx SINE Alu 1 316 0 838 259 39 104 chr10 4145543 4145628 -141443660 - L1ME3A LINE L1 -309 5861 5772 1857 120 8 0 chr10 4145628 4145887 -141443401 + AluSx SINE Alu 1 261 -51 838 259 39 104 chr10 4145887 4146415 -141442873 - L1ME3A LINE L1 -398 5772 5288 201 263 0 0 chr10 4146875 4146932 -141442356 + T-rich Low_complexity Low_complexity 1 57 0 287 308 92 64 chr10 4147301 4147627 -141441661 - L1MB5 LINE L1 -461 5660 5323 1938 151 176 14 chr10 4147632 4147996 -141441292 - MSTA LTR MaLR -1 427 5 205 209 47 35 chr10 4147996 4148076 -141441212 + (TA)n Simple_repeat Simple_repeat 1 81 0 22 0 0 0 chr10 4148153 4148175 -141441113 + AT_rich Low_complexity Low_complexity 1 22 0 353 320 113 34 chr10 4148497 4148912 -141440376 - L1MEd LINE L1 -5232 887 440 2238 122 0 0 chr10 4151420 4151716 -141437572 - AluSx SINE Alu -16 296 1 2417 65 0 3 chr10 4152233 4152527 -141436761 + AluY SINE Alu 1 293 -18 240 145 26 26 chr10 4154409 4154485 -141434803 + (TAGA)n Simple_repeat Simple_repeat 1 76 0 241 231 19 0 chr10 4154491 4154543 -141434745 + GA-rich Low_complexity Low_complexity 1 53 0 240 255 85 32 chr10 4154625 4154719 -141434569 + LTR67 LTR ERVL 457 555 -2 2199 84 7 30 chr10 4155176 4155473 -141433815 + AluSc SINE Alu 12 301 -8 212 253 84 12 chr10 4155477 4155560 -141433728 + MIR SINE MIR 150 238 -24 337 204 43 21 chr10 4155602 4155695 -141433593 + MLT1J LTR MaLR 105 199 -312 21 71 0 0 chr10 4157483 4157525 -141431763 + AT_rich Low_complexity Low_complexity 1 42 0 583 201 45 126 chr10 4157583 4157987 -141431301 - HAL1 LINE L1 -1313 1194 824 231 90 154 64 chr10 4158006 4158084 -141431204 - HAL1 LINE L1 -2273 234 150 5018 178 30 5 chr10 4158092 4158631 -141430657 + L1PB4 LINE L1 4621 5145 -1011 303 28 0 0 chr10 4158631 4158667 -141430621 + (TAA)n Simple_repeat Simple_repeat 2 37 0 5018 178 30 5 chr10 4158667 4159570 -141429718 + L1PB4 LINE L1 5145 6101 -55 601 192 26 40 chr10 4159569 4159720 -141429568 - L1MB5 LINE L1 -794 5352 5204 * 267 79 0 0 chr10 4159809 4159847 -141429441 + L1PB4 LINE L1 6112 6149 -7 1801 127 9 67 chr10 4160485 4160815 -141428473 + AluSx SINE Alu 1 311 -1 207 239 0 22 chr10 4161615 4161661 -141427627 - MIR SINE MIR -187 75 31 2254 112 0 0 chr10 4162375 4162670 -141426618 + AluSx SINE Alu 2 296 -16 498 331 0 11 chr10 4162986 4163164 -141426124 + (TG)n Simple_repeat Simple_repeat 1 176 0 262 279 0 44 chr10 4163189 4163372 -141425916 + (TATATG)n Simple_repeat Simple_repeat 3 177 0 1870 99 23 11 chr10 4165500 4165762 -141423526 + AluSg1 SINE Alu 39 303 -6 1433 231 140 7 chr10 4166206 4166612 -141422676 + MER65C LTR ERV1 1 460 -1 2035 164 55 33 chr10 4168588 4169131 -141420157 - MLT2A2 LTR ERVL -1 553 1 3415 130 2 2 chr10 4170302 4170793 -141418495 + L1PB1 LINE L1 5661 6151 0 25 31 0 0 chr10 4171048 4171080 -141418208 + AT_rich Low_complexity Low_complexity 1 32 0 1590 176 23 20 chr10 4171820 4172126 -141417162 - AluJb SINE Alu -5 307 1 210 269 298 0 chr10 4173462 4173566 -141415722 - L2 LINE L2 0 3272 3138 1660 130 30 15 chr10 4173704 4173973 -141415315 - L1PA13 LINE L1 -110 6053 5781 264 223 117 21 chr10 4174136 4174230 -141415058 - MER5A DNA MER1_type -83 106 4 243 0 0 0 chr10 4174802 4174829 -141414459 + (A)n Simple_repeat Simple_repeat 1 27 0 4504 124 19 5 chr10 4175770 4176417 -141412871 - L1PA13 LINE L1 0 6163 5508 190 255 85 106 chr10 4176567 4176661 -141412627 - MIR SINE MIR -100 108 17 304 250 35 132 chr10 4179615 4179843 -141409445 + L2 LINE L2 2291 2496 -818 1273 169 8 36 chr10 4179872 4180120 -141409168 - AluJo SINE Alu -32 280 40 704 141 0 0 chr10 4180120 4180219 -141409069 - AluJ/FLAM SINE Alu -211 101 3 210 296 14 0 chr10 4180220 4180291 -141408997 + L2 LINE L2 2776 2847 -467 1050 90 0 0 chr10 4181520 4181692 -141407596 + AluSx SINE Alu 1 172 -344 2037 137 0 10 chr10 4181692 4182006 -141407282 + AluSx SINE Alu 1 311 -1 1050 90 0 0 chr10 4182006 4182036 -141407252 + AluSx SINE Alu 171 516 0 310 319 34 46 chr10 4182578 4182763 -141406525 + MIR3 SINE MIR 17 198 -10 483 134 12 0 chr10 4184554 4184659 -141404629 - AluSc SINE Alu 0 311 206 41 98 0 0 chr10 4186038 4186170 -141403118 + AT_rich Low_complexity Low_complexity 1 132 0 2130 71 10 24 chr10 4186396 4186710 -141402578 + AluY SINE Alu 3 311 0 711 215 19 66 chr10 4188040 4188296 -141400992 - MER31B LTR ERV1 -222 244 1 2147 119 14 0 chr10 4189634 4189929 -141399359 + AluSp SINE Alu 1 299 -14 774 269 23 5 chr10 4191789 4192005 -141397283 + L2 LINE L2 2420 2639 -675 220 295 96 75 chr10 4192058 4192444 -141396844 + L2 LINE L2 2829 3222 -91 203 138 0 0 chr10 4194398 4194427 -141394861 + (TAAG)n Simple_repeat Simple_repeat 3 31 0 629 181 8 0 chr10 4194507 4194640 -141394648 + GA-rich Low_complexity Low_complexity 2 135 0 181 343 95 19 chr10 4196732 4196837 -141392451 + L2 LINE L2 3200 3312 -1 1864 191 27 39 chr10 4197005 4197444 -141391844 - Tigger2a DNA MER2_type 0 434 1 34 55 0 0 chr10 4197506 4197561 -141391727 + AT_rich Low_complexity Low_complexity 1 55 0 329 329 0 77 chr10 4199024 4199037 -141390251 - MIR SINE MIR -81 181 169 1920 205 73 9 chr10 4199037 4199476 -141389812 - MLT1C LTR MaLR 0 467 1 329 329 0 77 chr10 4199476 4199617 -141389671 - MIR SINE MIR -93 169 39 235 214 0 0 chr10 4199968 4200010 -141389278 + polypyrimidine Low_complexity Low_complexity 2 43 0 23 0 0 0 chr10 4200175 4200198 -141389090 + AT_rich Low_complexity Low_complexity 1 23 0 2149 106 0 0 chr10 4204231 4204513 -141384775 + AluSx SINE Alu 1 282 -30 1748 157 42 12 chr10 4204719 4205051 -141384237 - L1PA15 LINE L1 0 6165 5824 208 313 104 26 chr10 4205459 4205574 -141383714 - L2 LINE L2 0 3313 3190 859 192 32 96 chr10 4205643 4205924 -141383364 + MLT2B1 LTR ERVL 5 267 -253 260 227 0 6 chr10 4205973 4206145 -141383143 + (TA)n Simple_repeat Simple_repeat 1 171 0 258 179 0 0 chr10 4206158 4206214 -141383074 + MLT2B1 LTR ERVL 460 515 0 2544 112 17 0 chr10 4206865 4207223 -141382065 - THE1B LTR MaLR 0 364 1 216 333 126 0 chr10 4208152 4208239 -141381049 + L2 LINE L2 3201 3298 -15 246 62 0 0 chr10 4208240 4208272 -141381016 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 1544 139 171 0 chr10 4209053 4209311 -141379977 - AluSx SINE Alu -10 302 1 480 231 110 50 chr10 4209672 4209854 -141379434 + MER58A DNA MER1_type 23 215 -9 2011 128 13 7 chr10 4209913 4210217 -141379071 + AluSx SINE Alu 1 306 -6 506 262 105 88 chr10 4210589 4210761 -141378527 + L1MEc LINE L1 2135 2302 -3913 2268 67 0 27 chr10 4210761 4211061 -141378227 - AluY SINE Alu -19 292 1 506 262 105 88 chr10 4211061 4211099 -141378189 + L1MEc LINE L1 2302 2338 -3877 1198 212 134 24 chr10 4211099 4211471 -141377817 + MLT2D LTR ERVL 1 413 -1 506 262 105 88 chr10 4211471 4211840 -141377448 + L1MEc LINE L1 2338 2686 -3529 813 189 9 0 chr10 4212579 4212807 -141376481 + (TCCA)n Simple_repeat Simple_repeat 1 230 0 480 305 7 13 chr10 4212845 4212996 -141376292 - L2 LINE L2 -6 3307 3158 2465 62 7 0 chr10 4214175 4214481 -141374807 + AluY SINE Alu 2 309 -2 243 61 0 0 chr10 4214563 4214596 -141374692 + (TGAA)n Simple_repeat Simple_repeat 2 34 0 183 362 0 0 chr10 4215433 4215491 -141373797 + L2 LINE L2 3245 3302 -11 21 0 0 0 chr10 4217041 4217062 -141372226 + AT_rich Low_complexity Low_complexity 1 21 0 8402 157 21 12 chr10 4217400 4218947 -141370341 + Tigger1 DNA MER2_type 2 1562 -856 1037 166 32 9 chr10 4218948 4219165 -141370123 + Tigger1 DNA MER2_type 2197 2418 0 2163 128 10 7 chr10 4219521 4219827 -141369461 + AluSx SINE Alu 3 309 -3 377 245 32 0 chr10 4220045 4220139 -141369149 - Tigger2 DNA MER2_type -10 2708 2612 3875 187 24 5 chr10 4220144 4220951 -141368337 - Tigger2 DNA MER2_type -1894 824 3 3507 107 4 4 chr10 4222343 4222867 -141366421 - L1PB1 LINE L1 -5 6146 5623 2143 107 3 75 chr10 4222869 4223406 -141365882 + L1PB1 LINE L1 5086 5597 -554 185 105 0 26 chr10 4226943 4226981 -141362307 + (CA)n Simple_repeat Simple_repeat 2 38 0 833 331 72 24 chr10 4230095 4230960 -141358328 - ERVL-F LTR ERVL -4424 1340 361 826 84 0 15 chr10 4231087 4231218 -141358070 + (TTTC)n Simple_repeat Simple_repeat 2 130 0 273 275 61 15 chr10 4231256 4231324 -141357964 - ERVL-F LTR ERVL -5624 140 77 309 51 0 0 chr10 4231324 4231363 -141357925 + (CA)n Simple_repeat Simple_repeat 2 40 0 273 275 61 15 chr10 4231363 4231425 -141357863 - ERVL-F LTR ERVL -5687 77 4 1133 252 89 14 chr10 4231469 4231818 -141357470 - MLT2F LTR ERVL -58 605 231 1117 222 5 0 chr10 4231865 4232063 -141357225 + AluJb SINE Alu 86 284 -28 246 302 101 23 chr10 4232082 4232211 -141357077 - MLT2F LTR ERVL -524 139 1 21 36 0 0 chr10 4234444 4234472 -141354816 + AT_rich Low_complexity Low_complexity 1 28 0 470 327 97 27 chr10 4234516 4234886 -141354402 + L2 LINE L2 1728 2123 -1191 281 293 97 94 chr10 4235087 4235292 -141353996 + L2 LINE L2 2560 2763 -509 1835 147 63 0 chr10 4235292 4235577 -141353711 - AluSx SINE Alu -9 303 1 281 293 97 94 chr10 4235577 4235849 -141353439 + L2 LINE L2 2763 3043 -229 2562 194 19 41 chr10 4235947 4236514 -141352774 - L1MB3 LINE L1 -339 5844 5290 22 0 0 0 chr10 4236540 4236562 -141352726 + AT_rich Low_complexity Low_complexity 1 22 0 783 195 24 76 chr10 4238954 4239164 -141350124 + MER20 DNA MER1_type 1 199 -20 1996 101 0 31 chr10 4239172 4239460 -141349828 + AluSx SINE Alu 1 279 -33 276 120 0 0 chr10 4239462 4239512 -141349776 + (CAAAA)n Simple_repeat Simple_repeat 1 50 0 1397 235 63 16 chr10 4240577 4240956 -141348332 - L1MC2 LINE L1 -9 6335 5939 338 288 74 25 chr10 4241449 4241612 -141347676 - MLT1J2 LTR MaLR -11 439 269 372 342 0 0 chr10 4241683 4241800 -141347488 - MLT1J1 LTR MaLR -291 155 39 418 223 51 9 chr10 4242214 4242351 -141346937 + L1ME3A LINE L1 6018 6168 -2 191 310 155 17 chr10 4242765 4242881 -141346407 + L2 LINE L2 3179 3310 -3 335 226 47 75 chr10 4243906 4244012 -141345276 + LTR16C LTR ERVL 387 489 -2 1383 170 46 87 chr10 4244675 4244998 -141344290 - AluJb SINE Alu -2 310 1 1333 51 11 0 chr10 4247390 4247568 -141341720 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2175 134 0 3 chr10 4247577 4247890 -141341398 - AluSx SINE Alu 0 312 1 246 32 0 0 chr10 4248419 4248450 -141340838 + (CA)n Simple_repeat Simple_repeat 2 32 0 219 182 61 0 chr10 4248867 4248933 -141340355 + (TAGA)n Simple_repeat Simple_repeat 1 70 0 247 270 112 77 chr10 4249045 4249304 -141339984 + L2 LINE L2 2636 2903 -411 287 263 94 88 chr10 4249575 4249746 -141339542 + LTR16A1 LTR ERVL 286 457 0 199 360 40 8 chr10 4249910 4250035 -141339253 + L2 LINE L2 3113 3241 -72 1562 198 10 30 chr10 4250649 4250787 -141338501 + AluJb SINE Alu 1 140 -172 2318 73 3 3 chr10 4250787 4251073 -141338215 + AluSp SINE Alu 24 309 -4 1562 198 10 30 chr10 4251073 4251232 -141338056 + AluJb SINE Alu 140 292 -20 26 0 0 0 chr10 4251261 4251287 -141338001 + AT_rich Low_complexity Low_complexity 1 26 0 542 304 203 14 chr10 4251310 4251665 -141337623 - L2 LINE L2 0 3313 2892 21 0 0 0 chr10 4252283 4252304 -141336984 + AT_rich Low_complexity Low_complexity 1 21 0 244 328 0 0 chr10 4252307 4252371 -141336917 + (TG)n Simple_repeat Simple_repeat 1 64 0 210 262 0 0 chr10 4252384 4252468 -141336820 + (TG)n Simple_repeat Simple_repeat 2 85 0 2929 80 3 0 chr10 4254043 4254395 -141334893 - THE1A LTR MaLR -1 354 2 1827 164 0 10 chr10 4255174 4255462 -141333826 + AluJo SINE Alu 1 286 -22 252 77 0 0 chr10 4255462 4255501 -141333787 + (CATA)n Simple_repeat Simple_repeat 2 40 0 346 289 91 5 chr10 4257298 4257485 -141331803 - HAL1 LINE L1 -588 1919 1717 390 270 39 103 chr10 4257548 4257781 -141331507 - HAL1 LINE L1 -1448 1059 842 423 0 0 0 chr10 4258122 4258169 -141331119 + (TA)n Simple_repeat Simple_repeat 2 48 0 1516 238 127 30 chr10 4259227 4259693 -141329595 + MLT2B2 LTR ERVL 1 511 -4 2345 125 0 3 chr10 4259868 4260259 -141329029 - L1PA10 LINE L1 -570 5598 5209 4097 93 28 0 chr10 4260259 4260794 -141328494 + L1PA10 LINE L1 5618 6168 0 1263 183 0 8 chr10 4261258 4261493 -141327795 - Tigger7 DNA MER2_type 0 2491 2259 271 182 0 0 chr10 4261512 4261556 -141327732 - Tigger7 DNA MER2_type -292 47 4 228 327 67 30 chr10 4261774 4261939 -141327349 - MIR SINE MIR -3 259 89 185 312 56 40 chr10 4264266 4264391 -141324897 + L2 LINE L2 2659 2785 -529 352 268 113 30 chr10 4264421 4264589 -141324699 + MIR SINE MIR 11 192 -70 927 184 5 40 chr10 4265035 4265236 -141324052 - MER39B LTR ERV1 0 653 460 2224 227 39 16 chr10 4265239 4265754 -141323534 + MER87 LTR ERV1 11 537 -4 2718 142 35 22 chr10 4265757 4266215 -141323073 - MER39B LTR ERV1 -189 464 1 1190 231 75 77 chr10 4266574 4267107 -141322181 - MER34B LTR ERV1 0 565 34 429 171 0 0 chr10 4268389 4268459 -141320829 + L1MA3 LINE L1 6180 6249 -56 612 141 0 0 chr10 4268462 4268554 -141320734 + L1MA1 LINE L1 6211 6302 0 1991 147 0 3 chr10 4270522 4270842 -141318446 - AluSx SINE Alu 0 312 7 2591 146 82 49 chr10 4271273 4271352 -141317936 - MER34B LTR ERV1 0 565 490 540 30 0 0 chr10 4271352 4271419 -141317869 + L1PB3 LINE L1 6087 6153 -1 2591 146 82 49 chr10 4271419 4271886 -141317402 - MER34B LTR ERV1 -75 490 1 1815 118 0 0 chr10 4272489 4272734 -141316554 - AluSx SINE Alu -4 308 64 1737 220 66 18 chr10 4274594 4275035 -141314253 + MLT1C LTR MaLR 6 467 0 2602 59 0 0 chr10 4275891 4276195 -141313093 + AluY SINE Alu 1 304 -7 31 26 0 0 chr10 4276286 4276324 -141312964 + AT_rich Low_complexity Low_complexity 1 38 0 26 0 0 0 chr10 4277030 4277056 -141312232 + AT_rich Low_complexity Low_complexity 1 26 0 23 68 0 0 chr10 4277471 4277515 -141311773 + AT_rich Low_complexity Low_complexity 1 44 0 1592 228 25 11 chr10 4277955 4278314 -141310974 - MLT1A1 LTR MaLR -1 364 1 27 0 0 0 chr10 4278470 4278497 -141310791 + AT_rich Low_complexity Low_complexity 1 27 0 757 287 75 37 chr10 4279128 4279584 -141309704 - L1ME3 LINE L1 -211 6020 5548 479 67 0 0 chr10 4279690 4279750 -141309538 + Alu SINE Alu 233 292 -18 269 208 0 56 chr10 4279753 4279825 -141309463 + MIR SINE MIR 172 239 -23 263 286 0 0 chr10 4279833 4279889 -141309399 + MIR SINE MIR 200 255 -7 1643 158 0 58 chr10 4279997 4280308 -141308980 + AluJb SINE Alu 1 293 -19 357 174 0 0 chr10 4280309 4280378 -141308910 + GA-rich Low_complexity Low_complexity 2 70 0 669 204 0 0 chr10 4281091 4281238 -141308050 + (CA)n Simple_repeat Simple_repeat 1 147 0 2601 64 0 0 chr10 4281270 4281581 -141307707 - AluY SINE Alu 0 311 1 1871 301 53 50 chr10 4281606 4282533 -141306755 + L2 LINE L2 584 1513 -1801 500 223 1 0 chr10 4282536 4282647 -141306641 - L1P1 LINE L1 -678 5477 5366 281 235 0 39 chr10 4282644 4282746 -141306542 - L1ME3 LINE L1 -955 5260 5163 * 773 200 0 0 chr10 4282754 4282881 -141306407 - FLAM_C SINE Alu -16 127 2 2228 250 51 38 chr10 4282881 4283668 -141305620 - L1ME3 LINE L1 -1034 5181 4385 3972 163 30 36 chr10 4283674 4284255 -141305033 - L1MB3 LINE L1 -3 6180 5604 1948 157 118 18 chr10 4284255 4284644 -141304644 + MSTA LTR MaLR 1 428 0 3972 163 30 36 chr10 4284644 4284933 -141304355 - L1MB3 LINE L1 -579 5604 5315 707 257 93 13 chr10 4284930 4285230 -141304058 - L1ME3 LINE L1 -2159 4056 3733 * 1611 299 48 19 chr10 4285271 4286070 -141303218 - L1ME3 LINE L1 -5381 1015 194 284 344 134 50 chr10 4286220 4286283 -141303005 - L3 LINE CR1 -30 1547 1491 2207 113 7 0 chr10 4286283 4286575 -141302713 - AluSx SINE Alu -18 294 1 284 344 134 50 chr10 4286575 4286869 -141302419 - L3 LINE CR1 -86 1491 1160 206 379 129 9 chr10 4287008 4287124 -141302164 - L2 LINE L2 -1 3271 3142 331 291 10 0 chr10 4287473 4287576 -141301712 + (TA)n Simple_repeat Simple_repeat 1 104 0 1022 163 113 0 chr10 4288126 4288347 -141300941 - L1PA16 LINE L1 0 6166 5921 2089 88 3 52 chr10 4288905 4289211 -141300077 - AluSp SINE Alu -22 291 1 24 53 0 0 chr10 4290239 4290277 -141299011 + AT_rich Low_complexity Low_complexity 1 38 0 549 150 20 0 chr10 4291029 4291129 -141298159 + MSTB LTR MaLR 1 102 -324 323 88 18 0 chr10 4291120 4291177 -141298111 + MSTB LTR MaLR 61 118 -310 * 228 79 26 0 chr10 4291287 4291325 -141297963 + MSTA LTR MaLR 76 114 -314 1640 184 35 6 chr10 4291325 4291668 -141297620 + MSTA LTR MaLR 76 428 0 239 240 13 0 chr10 4291725 4291800 -141297488 + (TCTA)n Simple_repeat Simple_repeat 1 76 0 1273 178 57 0 chr10 4291808 4292055 -141297233 - Tigger5 DNA MER2_type 0 2323 2063 1791 119 10 34 chr10 4292057 4292352 -141296936 + AluSq SINE Alu 23 310 -3 988 200 5 19 chr10 4292454 4292664 -141296624 + Tigger5 DNA MER2_type 2054 2260 -63 447 371 35 22 chr10 4294085 4294314 -141294974 + MIR SINE MIR 19 250 -12 1249 134 3 189 chr10 4294365 4294730 -141294558 + AluJb SINE Alu 1 297 -15 316 309 98 5 chr10 4296836 4296882 -141292406 + L1ME4a LINE L1 5893 5933 -188 1759 173 4 0 chr10 4296882 4297160 -141292128 + AluJb SINE Alu 1 279 -33 316 309 98 5 chr10 4297160 4297307 -141291981 + L1ME4a LINE L1 5933 6104 -17 2060 112 31 0 chr10 4298229 4298516 -141290772 - AluSq SINE Alu -10 303 8 196 211 123 0 chr10 4298640 4298697 -141290591 + MIR SINE MIR 83 146 -62 1867 188 18 13 chr10 4298754 4299142 -141290146 + MLT1B LTR MaLR 1 390 0 230 378 71 0 chr10 4299505 4299632 -141289656 + MIR3 SINE MIR 58 193 -15 1482 125 51 0 chr10 4299781 4299997 -141289291 + AluSg/x SINE Alu 72 298 -12 1166 190 112 37 chr10 4300132 4300453 -141288835 - MER7A DNA MER2_type -3 343 1 183 200 27 13 chr10 4300609 4300684 -141288604 + (TA)n Simple_repeat Simple_repeat 2 77 0 369 109 0 0 chr10 4300719 4300774 -141288514 + (TA)n Simple_repeat Simple_repeat 2 56 0 225 322 154 43 chr10 4300784 4300992 -141288296 + MIR SINE MIR 32 262 0 294 180 0 0 chr10 4301372 4301433 -141287855 + CT-rich Low_complexity Low_complexity 4 64 0 1081 60 16 28 chr10 4301449 4301631 -141287657 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1894 169 3 19 chr10 4301639 4301946 -141287342 - AluSx SINE Alu -10 302 1 288 211 0 0 chr10 4302110 4302186 -141287102 + CT-rich Low_complexity Low_complexity 1 76 0 250 235 0 29 chr10 4302216 4302239 -141287049 + MER3 DNA MER1_type 27 47 -162 575 259 52 5 chr10 4302239 4302432 -141286856 - MER3 DNA MER1_type 0 209 8 521 398 46 16 chr10 4302633 4303131 -141286157 + L3 LINE CR1 929 1441 -136 2037 128 3 0 chr10 4303225 4303533 -141285755 + AluSx SINE Alu 1 309 0 1397 183 44 24 chr10 4303867 4304204 -141285084 - MLT1C LTR MaLR 0 467 118 531 168 19 9 chr10 4304204 4304311 -141284977 - AluJb SINE Alu -13 299 192 600 142 8 90 chr10 4304311 4304445 -141284843 - MLT1C LTR MaLR -267 123 1 377 326 54 32 chr10 4304536 4304849 -141284439 + L2 LINE L2 2709 3022 -250 310 310 138 4 chr10 4304964 4305295 -141283993 + L1ME3 LINE L1 5728 6119 -45 390 130 0 0 chr10 4307021 4307090 -141282198 + MER66A LTR ERV1 410 478 0 2089 154 0 0 chr10 4307179 4307477 -141281811 - AluSx SINE Alu -14 298 1 21 0 0 0 chr10 4307522 4307543 -141281745 + AT_rich Low_complexity Low_complexity 1 21 0 2269 120 0 0 chr10 4307559 4307858 -141281430 - AluSx SINE Alu -13 299 1 772 319 107 18 chr10 4309761 4310418 -141278870 - L2 LINE L2 -298 3015 2294 637 105 11 0 chr10 4310995 4311090 -141278198 + L1PB2 LINE L1 6053 6148 -3 25 0 0 0 chr10 4311090 4311115 -141278173 + AT_rich Low_complexity Low_complexity 1 25 0 3537 172 12 10 chr10 4311569 4312260 -141277028 - L1MB7 LINE L1 -9 6175 5484 307 90 254 0 chr10 4312276 4312343 -141276945 + L1MB3 LINE L1 6081 6164 -19 2783 102 0 10 chr10 4312363 4312775 -141276513 - L1PB1 LINE L1 0 6151 5744 532 290 58 91 chr10 4313210 4313638 -141275650 + MLT1J2 LTR MaLR 32 445 -5 1220 237 56 58 chr10 4314068 4314638 -141274650 + MER34B LTR ERV1 3 585 0 353 284 60 8 chr10 4314727 4314861 -141274427 - L2 LINE L2 0 3272 3132 231 384 15 8 chr10 4317168 4317301 -141271987 - L2 LINE L2 -6 3266 3133 354 303 21 14 chr10 4317423 4317565 -141271723 + MIR SINE MIR 86 228 -34 189 292 0 15 chr10 4318039 4318104 -141271184 - MIR SINE MIR 0 262 199 237 307 13 0 chr10 4318207 4318282 -141271006 - MIR SINE MIR -82 180 105 2254 128 0 0 chr10 4319645 4319951 -141269337 + AluSx SINE Alu 1 306 -6 1201 132 57 0 chr10 4320165 4320377 -141268911 + L1MA5A LINE L1 6071 6294 -3 23 54 0 0 chr10 4320967 4321004 -141268284 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr10 4321053 4321074 -141268214 + AT_rich Low_complexity Low_complexity 1 21 0 305 330 61 45 chr10 4321508 4321838 -141267450 + L1MC/D LINE L1 425 759 -5360 22 0 0 0 chr10 4321869 4321891 -141267397 + AT_rich Low_complexity Low_complexity 1 22 0 396 298 70 85 chr10 4321963 4322104 -141267184 + L1MC/D LINE L1 900 1042 -5077 360 64 0 0 chr10 4322104 4322151 -141267137 + (CA)n Simple_repeat Simple_repeat 1 47 0 396 298 70 85 chr10 4322151 4322338 -141266950 + L1MC/D LINE L1 1042 1223 -4896 343 316 134 20 chr10 4322473 4322869 -141266419 + L1MC/D LINE L1 2806 3246 -2883 538 121 165 0 chr10 4322870 4322961 -141266327 + AluSc SINE Alu 155 260 -49 402 361 24 33 chr10 4323085 4323415 -141265873 + L1MC/D LINE L1 4943 5269 -860 383 328 54 20 chr10 4323448 4323854 -141265434 + L1MC/D LINE L1 5311 5730 -2061 303 312 118 94 chr10 4325200 4325572 -141263716 + L1ME3A LINE L1 677 1057 -5473 2093 120 3 23 chr10 4325690 4326026 -141263262 + AluSx SINE Alu 1 312 0 323 286 5 43 chr10 4326169 4326354 -141262934 + L1ME3A LINE L1 1410 1587 -4943 230 300 38 0 chr10 4326542 4326622 -141262666 + L1ME3A LINE L1 1712 1794 -4748 321 289 117 49 chr10 4326987 4327253 -141262035 + L1ME3A LINE L1 2365 2648 -3892 342 312 76 30 chr10 4327348 4327611 -141261677 + L1ME3A LINE L1 3815 4089 -2451 604 307 63 8 chr10 4327676 4328041 -141261247 + L1ME3A LINE L1 4233 4617 -1923 367 318 90 67 chr10 4328128 4328619 -141260669 + L1ME3A LINE L1 4735 5236 -1304 843 141 33 0 chr10 4329043 4329164 -141260124 - FLAM_C SINE Alu -18 125 1 5031 163 22 9 chr10 4330099 4331078 -141258210 - L1MC1 LINE L1 -5 6328 5337 36 40 0 0 chr10 4332723 4332773 -141256515 + AT_rich Low_complexity Low_complexity 1 50 0 28 29 0 0 chr10 4333573 4333608 -141255680 + AT_rich Low_complexity Low_complexity 1 35 0 940 288 138 14 chr10 4334346 4334869 -141254419 + L1ME3A LINE L1 5969 6555 -9 285 281 104 18 chr10 4334865 4335029 -141254259 + L1ME4a LINE L1 5943 6120 -1 * 4979 245 60 31 chr10 4335665 4338708 -141250580 - L1MD2 LINE L1 -2 6617 3490 1816 287 17 4 chr10 4338718 4339412 -141249876 - L1MD2 LINE L1 -3218 3188 2486 1363 312 9 27 chr10 4339544 4339989 -141249299 - L1MD2 LINE L1 -5965 444 8 525 305 0 8 chr10 4340362 4340493 -141248795 + MER5A DNA MER1_type 1 130 -59 2433 45 3 0 chr10 4340516 4340808 -141248480 - AluY SINE Alu -18 293 1 199 329 14 0 chr10 4340835 4340908 -141248380 - L2 LINE L2 -1454 1860 1787 1905 181 57 24 chr10 4341377 4341797 -141247491 + Tigger2a DNA MER2_type 1 434 0 248 154 31 31 chr10 4342069 4342134 -141247154 + (TG)n Simple_repeat Simple_repeat 2 66 0 771 169 0 0 chr10 4342279 4342397 -141246891 - FLAM_C SINE Alu -25 118 1 212 200 50 0 chr10 4342978 4343058 -141246230 + (TA)n Simple_repeat Simple_repeat 1 84 0 22 70 0 0 chr10 4343723 4343766 -141245522 + AT_rich Low_complexity Low_complexity 1 43 0 27 49 0 0 chr10 4343978 4344019 -141245269 + AT_rich Low_complexity Low_complexity 1 41 0 180 0 0 0 chr10 4344417 4344437 -141244851 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1829 128 39 7 chr10 4344439 4344594 -141244694 - AluSx SINE Alu -21 291 122 279 0 0 0 chr10 4344594 4344625 -141244663 + (TG)n Simple_repeat Simple_repeat 2 32 0 1829 128 39 7 chr10 4344625 4344751 -141244537 - AluSx SINE Alu -190 122 1 260 360 43 0 chr10 4344753 4344892 -141244396 - L2 LINE L2 -535 2779 2635 356 278 110 86 chr10 4345200 4345445 -141243843 + MIR SINE MIR 12 262 0 273 299 88 15 chr10 4348404 4348541 -141240747 - L2 LINE L2 -6 3307 3161 227 350 68 23 chr10 4348846 4349066 -141240222 - MIR SINE MIR -13 249 20 1770 170 47 19 chr10 4349503 4349868 -141239420 - THE1C LTR MaLR 0 375 1 581 124 0 0 chr10 4350365 4350462 -141238826 - L1PA15 LINE L1 -8 6157 6061 2891 253 49 31 chr10 4350569 4351722 -141237566 - L1M4 LINE L1 -2498 3648 2475 1091 255 83 85 chr10 4351782 4352531 -141236757 - L1MCb LINE L1 -5298 747 1 188 320 13 13 chr10 4353559 4353634 -141235654 + L2 LINE L2 3195 3269 -3 298 295 32 0 chr10 4354411 4354506 -141234782 - MER5A DNA MER1_type -79 110 13 438 250 52 0 chr10 4354748 4354864 -141234424 + MIR SINE MIR 111 232 -30 1538 154 33 46 chr10 4354943 4355249 -141234039 - AluJb SINE Alu -10 302 1 723 250 5 21 chr10 4355290 4355478 -141233810 - MER5A DNA MER1_type -1 188 4 231 36 0 0 chr10 4356061 4356089 -141233199 + (CCTG)n Simple_repeat Simple_repeat 1 28 0 2152 114 0 0 chr10 4356968 4357296 -141231992 + AluSx SINE Alu 4 331 0 188 310 23 11 chr10 4358047 4358134 -141231154 - L2 LINE L2 -462 2852 2765 1297 199 153 3 chr10 4359393 4359694 -141229594 + MER7A DNA MER2_type 3 346 0 631 296 151 20 chr10 4359704 4360102 -141229186 - MLT1J2 LTR MaLR 0 450 1 228 235 20 0 chr10 4360249 4360300 -141228988 + CT-rich Low_complexity Low_complexity 4 55 0 832 121 14 0 chr10 4361374 4361515 -141227773 + (GAAA)n Simple_repeat Simple_repeat 2 144 0 1942 104 7 0 chr10 4362829 4363099 -141226189 + THE1B LTR MaLR 93 364 0 1626 220 24 69 chr10 4363318 4363781 -141225507 - MLT2B1 LTR ERVL -74 446 5 2092 118 0 0 chr10 4363890 4364208 -141225080 - AluSg SINE Alu 0 318 1 33 0 0 0 chr10 4364739 4364772 -141224516 + AT_rich Low_complexity Low_complexity 1 33 0 312 312 109 18 chr10 4365403 4365679 -141223609 + L1ME2 LINE L1 4950 5250 -896 * 766 308 72 39 chr10 4365671 4366269 -141223019 + L1ME LINE L1 20 637 -5433 284 301 0 0 chr10 4366503 4366596 -141222692 + L1ME LINE L1 537 629 -5441 276 312 0 0 chr10 4366615 4366708 -141222580 + L1ME LINE L1 537 629 -5441 898 229 41 28 chr10 4366735 4367098 -141222190 + L1ME LINE L1 545 912 -5158 878 265 59 97 chr10 4367102 4367709 -141221579 + L1ME2 LINE L1 5494 6077 -87 21 36 0 0 chr10 4367779 4367807 -141221481 + AT_rich Low_complexity Low_complexity 1 28 0 1752 154 4 18 chr10 4369503 4369782 -141219506 + AluJb SINE Alu 3 277 -35 180 273 146 0 chr10 4371392 4371447 -141217841 + MIR SINE MIR 57 119 -143 351 184 23 35 chr10 4371665 4371752 -141217536 + MER89 LTR ERV1 1 86 -473 316 210 105 24 chr10 4371726 4371850 -141217438 + MER89 LTR ERV1 197 330 -229 * 1985 160 77 34 chr10 4372646 4373156 -141216132 + MLT2A2 LTR ERVL 3 554 0 1120 220 118 32 chr10 4373228 4373601 -141215687 + MER119 DNA MER1_type 176 580 -3 522 83 0 0 chr10 4375233 4375305 -141213983 + (TA)n Simple_repeat Simple_repeat 1 72 0 7285 35 3 0 chr10 4376000 4377219 -141212069 - L1PA4 LINE L1 -20 6135 4913 904 284 99 19 chr10 4378885 4379516 -141209772 - L1ME3A LINE L1 -5 6165 5453 1679 191 52 14 chr10 4382326 4382688 -141206600 - MLT1B LTR MaLR -14 376 1 2470 54 0 3 chr10 4383179 4383476 -141205812 - AluY SINE Alu -15 296 1 779 194 0 8 chr10 4384222 4384356 -141204932 + FLAM_C SINE Alu 1 133 -10 2169 102 0 10 chr10 4384370 4384665 -141204623 - AluSx SINE Alu -16 296 5 39 60 0 0 chr10 4384921 4384988 -141204300 + AT_rich Low_complexity Low_complexity 1 67 0 507 260 46 4 chr10 4385135 4385307 -141203981 + MER92A LTR ERV1 264 412 0 24 0 0 0 chr10 4387390 4387414 -141201874 + AT_rich Low_complexity Low_complexity 1 24 0 256 229 14 14 chr10 4387831 4387901 -141201387 + CT-rich Low_complexity Low_complexity 2 71 0 185 324 73 0 chr10 4388127 4388195 -141201093 - MER5A DNA MER1_type 0 189 117 22 0 0 0 chr10 4388689 4388711 -141200577 + AT_rich Low_complexity Low_complexity 1 22 0 2333 106 0 3 chr10 4389381 4389693 -141199595 + AluY SINE Alu 1 311 0 22 0 0 0 chr10 4389778 4389800 -141199488 + AT_rich Low_complexity Low_complexity 1 22 0 1089 197 10 10 chr10 4389955 4390163 -141199125 + AluJo SINE Alu 87 294 -18 1901 180 107 7 chr10 4390439 4390877 -141198411 - MER31A LTR ERV1 0 485 4 1694 194 61 16 chr10 4391139 4391749 -141197539 + MER39 LTR ERV1 2 701 -6 25 31 0 0 chr10 4393086 4393118 -141196170 + AT_rich Low_complexity Low_complexity 1 32 0 1121 216 24 0 chr10 4393579 4393833 -141195455 + MER57A LTR ERV1 1 260 -143 235 362 12 0 chr10 4394375 4394538 -141194750 + (CACTT)n Simple_repeat Simple_repeat 2 166 0 220 307 21 14 chr10 4395170 4395310 -141193978 + (CTTTA)n Simple_repeat Simple_repeat 3 143 0 244 64 21 0 chr10 4395354 4395401 -141193887 + MER57A LTR ERV1 215 262 -141 258 358 0 6 chr10 4395509 4395688 -141193600 + (CTTTA)n Simple_repeat Simple_repeat 2 179 0 244 64 21 0 chr10 4395691 4395738 -141193550 + MER57A LTR ERV1 215 262 -141 219 297 29 17 chr10 4395748 4395923 -141193365 + (CACTT)n Simple_repeat Simple_repeat 4 180 0 273 301 45 0 chr10 4398055 4398211 -141191077 - MER117 DNA MER1_type -5 192 30 1370 196 9 82 chr10 4401475 4401937 -141187351 - AluJb SINE Alu 0 438 1 197 339 161 37 chr10 4402319 4402673 -141186615 - L3 LINE CR1 -761 816 419 206 303 76 41 chr10 4403315 4403460 -141185828 + L2 LINE L2 2380 2529 -785 207 356 29 10 chr10 4406001 4406105 -141183183 + L2 LINE L2 3164 3269 -3 322 194 37 46 chr10 4406412 4406520 -141182768 + MER69 DNA AcHobo 2408 2514 -12 22 0 0 0 chr10 4406955 4406977 -141182311 + AT_rich Low_complexity Low_complexity 1 22 0 246 267 12 12 chr10 4407205 4407291 -141181997 + LTR67 LTR ERVL 459 544 -13 215 241 37 19 chr10 4407305 4407359 -141181929 - MIR3 SINE MIR -36 172 118 292 236 18 0 chr10 4407897 4408007 -141181281 + (CA)n Simple_repeat Simple_repeat 1 112 0 406 261 12 0 chr10 4408030 4408195 -141181093 + (CA)n Simple_repeat Simple_repeat 1 167 0 2650 227 24 27 chr10 4408863 4409573 -141179715 + L1MB5 LINE L1 5431 6138 -36 248 213 33 0 chr10 4411423 4411545 -141177743 + (TG)n Simple_repeat Simple_repeat 2 127 0 401 133 13 0 chr10 4411800 4411875 -141177413 + GA-rich Low_complexity Low_complexity 3 78 0 2264 107 0 0 chr10 4412831 4413120 -141176168 - AluSq SINE Alu -24 289 1 198 143 0 0 chr10 4413249 4413284 -141176004 + (TG)n Simple_repeat Simple_repeat 2 36 0 330 289 0 11 chr10 4413287 4413377 -141175911 + L1MC4 LINE L1 6614 6702 -1340 209 186 35 12 chr10 4413481 4413567 -141175721 + (TA)n Simple_repeat Simple_repeat 2 89 0 271 198 23 47 chr10 4414118 4414204 -141175084 - L1MEc LINE L1 -6274 122 39 2425 51 7 0 chr10 4415628 4415923 -141173365 + AluY SINE Alu 1 297 -14 1025 222 100 14 chr10 4416543 4416898 -141172390 - MLT1C LTR MaLR 0 467 81 906 83 0 0 chr10 4416898 4417019 -141172269 + L1PA13 LINE L1 6030 6150 -13 953 203 0 0 chr10 4417029 4417192 -141172096 + FRAM SINE Alu 1 160 -16 256 234 39 0 chr10 4417246 4417323 -141171965 - MLT1C LTR MaLR -387 80 1 188 352 159 27 chr10 4417677 4418049 -141171239 + L2 LINE L2 2319 2739 -575 1193 191 88 27 chr10 4418159 4418489 -141170799 - MLT1A1 LTR MaLR 0 365 16 256 335 113 38 chr10 4418647 4418886 -141170402 + L2 LINE L2 3003 3259 -54 1080 246 85 79 chr10 4421393 4422003 -141167285 - MLT1E2 LTR MaLR -2 624 9 1674 194 10 0 chr10 4422007 4422301 -141166987 + AluJo SINE Alu 1 297 -15 3149 167 87 22 chr10 4422430 4423108 -141166180 - MER72 LTR ERV1 0 722 1 21 57 0 0 chr10 4423723 4423758 -141165530 + AT_rich Low_complexity Low_complexity 1 35 0 2336 103 0 3 chr10 4424327 4424639 -141164649 - AluSq SINE Alu -2 311 1 3241 238 103 15 chr10 4425549 4426756 -141162532 + Charlie1 DNA MER1_type 1449 2761 0 33 0 0 0 chr10 4427990 4428023 -141161265 + AT_rich Low_complexity Low_complexity 1 33 0 265 230 0 23 chr10 4428314 4428401 -141160887 + (CATA)n Simple_repeat Simple_repeat 4 88 0 184 206 15 132 chr10 4428411 4428479 -141160809 + MIR SINE MIR 89 148 -60 1619 197 13 7 chr10 4428483 4428783 -141160505 + AluJo SINE Alu 1 302 -10 189 213 0 0 chr10 4429093 4429140 -141160148 + GA-rich Low_complexity Low_complexity 1 47 0 213 146 24 0 chr10 4430401 4430442 -141158846 + A-rich Low_complexity Low_complexity 1 42 0 24 0 0 0 chr10 4431157 4431181 -141158107 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr10 4431458 4431480 -141157808 + AT_rich Low_complexity Low_complexity 1 22 0 427 279 19 25 chr10 4431540 4431698 -141157590 - L1MD3 LINE L1 -137 7858 7702 1499 28 0 11 chr10 4431725 4431907 -141157381 + L1PA3 LINE L1 5976 6155 0 3338 257 57 51 chr10 4432005 4432349 -141156939 - L1MB7 LINE L1 0 6184 5844 1827 149 0 17 chr10 4432349 4432650 -141156638 - AluJo SINE Alu -16 296 1 3338 257 57 51 chr10 4432650 4435064 -141154224 - L1MB7 LINE L1 -340 5844 3446 1686 166 3 21 chr10 4435064 4435383 -141153905 + AluJb SINE Alu 1 314 0 3338 257 57 51 chr10 4435383 4436266 -141153022 - L1MB7 LINE L1 -2738 3446 3786 2060 144 32 16 chr10 4436266 4436635 -141152653 + THE1C LTR MaLR 1 375 0 3338 257 57 51 chr10 4436635 4437001 -141152287 - L1MB7 LINE L1 -2397 3787 3425 6032 249 44 50 chr10 4437116 4439763 -141149525 + L1M4 LINE L1 2467 5098 -1048 404 238 10 0 chr10 4439811 4439912 -141149376 + L1MC1 LINE L1 6232 6333 0 2227 102 0 0 chr10 4439935 4440229 -141149059 - AluSc SINE Alu -15 294 1 1894 144 30 7 chr10 4440458 4440757 -141148531 + AluSx SINE Alu 1 306 -6 358 274 108 0 chr10 4441100 4441257 -141148031 + MIR SINE MIR 89 262 0 954 231 158 7 chr10 4441532 4441830 -141147458 + MER2 DNA MER2_type 1 343 -1 2613 259 41 18 chr10 4441854 4442314 -141146974 - L1MC4 LINE L1 0 8042 7553 782 187 42 61 chr10 4442314 4442528 -141146760 + MER6B DNA MER2_type 1 210 0 2613 259 41 18 chr10 4442528 4442904 -141146384 - L1MC4 LINE L1 -489 7553 7187 2316 160 42 7 chr10 4443548 4443955 -141145333 + MSTB LTR MaLR 6 426 0 620 313 27 30 chr10 4448609 4448871 -141140417 - MIR SINE MIR 0 262 2 6778 160 51 24 chr10 4449670 4450970 -141138318 - Tigger1 DNA MER2_type 0 2418 1084 2323 164 32 50 chr10 4450976 4451475 -141137813 - Tigger1 DNA MER2_type -1928 490 1 208 285 159 46 chr10 4452408 4452559 -141136729 + L3 LINE CR1 280 447 -1130 352 255 150 13 chr10 4452616 4452769 -141136519 - L2 LINE L2 -12 3301 3128 476 266 94 47 chr10 4453521 4453818 -141135470 - MLT1J LTR MaLR -7 504 194 589 273 78 7 chr10 4455237 4455545 -141133743 - L1MB7 LINE L1 -2951 3195 2866 5420 80 11 23 chr10 4455550 4456335 -141132953 + L1PA8A LINE L1 5355 6130 -1 239 300 6 38 chr10 4456344 4456504 -141132784 - L1MB7 LINE L1 -3273 2873 2719 28 61 0 0 chr10 4456591 4456640 -141132648 + AT_rich Low_complexity Low_complexity 1 49 0 354 123 0 0 chr10 4457291 4457348 -141131940 + (CA)n Simple_repeat Simple_repeat 2 58 0 203 248 9 0 chr10 4457380 4457485 -141131803 + (TA)n Simple_repeat Simple_repeat 1 106 0 243 0 0 0 chr10 4457486 4457513 -141131775 + (CA)n Simple_repeat Simple_repeat 2 28 0 2126 125 3 0 chr10 4458354 4458650 -141130638 + AluSp SINE Alu 1 297 -16 486 47 94 0 chr10 4458650 4458778 -141130510 + (TA)n Simple_repeat Simple_repeat 1 140 0 444 313 98 9 chr10 4459524 4459748 -141129540 + MIR SINE MIR 18 261 -1 216 0 0 0 chr10 4460048 4460072 -141129216 + (A)n Simple_repeat Simple_repeat 1 24 0 270 0 0 0 chr10 4462590 4462620 -141126668 + (CA)n Simple_repeat Simple_repeat 2 31 0 3447 158 39 2 chr10 4463404 4464016 -141125272 - MER41B LTR ERV1 0 635 1 224 329 61 0 chr10 4464050 4464132 -141125156 + L2 LINE L2 3209 3295 -18 1565 189 0 0 chr10 4464269 4464534 -141124754 + MLT1A1 LTR MaLR 101 365 0 306 0 0 0 chr10 4464850 4464884 -141124404 + (CA)n Simple_repeat Simple_repeat 1 34 0 398 94 16 0 chr10 4465086 4465150 -141124138 + (TTCC)n Simple_repeat Simple_repeat 3 67 0 3407 154 48 9 chr10 4467655 4468286 -141121002 - L1PA15 LINE L1 -7 6158 5504 2197 112 3 0 chr10 4468743 4469047 -141120241 - AluSx SINE Alu -7 305 1 261 318 91 0 chr10 4469269 4469379 -141119909 + L2 LINE L2 2939 3058 -214 207 224 0 86 chr10 4469935 4470051 -141119237 + A-rich Low_complexity Low_complexity 2 107 0 208 153 25 76 chr10 4470503 4470660 -141118628 + (TA)n Simple_repeat Simple_repeat 1 149 0 255 323 42 37 chr10 4471600 4471789 -141117499 - L2 LINE L2 0 3313 3124 794 235 46 28 chr10 4471815 4472032 -141117256 - MER58A DNA MER1_type -2 222 2 492 359 38 23 chr10 4472076 4472338 -141116950 - L2 LINE L2 -244 3069 2804 264 275 44 0 chr10 4472751 4472842 -141116446 - L1MEc LINE L1 -3730 2485 2391 4995 165 32 5 chr10 4472855 4473872 -141115416 - L1PA16 LINE L1 -9 6157 5116 592 260 34 15 chr10 4473906 4474171 -141115117 - L1MEc LINE L1 -3992 2404 2135 403 263 60 18 chr10 4474331 4474548 -141114740 - L1MEc LINE L1 -5320 1076 851 1087 140 5 37 chr10 4525443 4525657 -141063631 + AluSp SINE Alu 1 207 -106 21 0 0 0 chr10 4525765 4525786 -141063502 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr10 4526701 4526727 -141062561 + AT_rich Low_complexity Low_complexity 1 26 0 1444 153 0 47 chr10 4527175 4527486 -141061802 + AluJb SINE Alu 22 319 0 687 39 39 0 chr10 4527596 4527698 -141061590 + (TAGA)n Simple_repeat Simple_repeat 4 109 0 429 261 72 83 chr10 4527707 4527931 -141061357 + L1MEc LINE L1 1925 2150 -4246 919 293 35 60 chr10 4527931 4528331 -141060957 - MLT1B LTR MaLR 0 390 1 429 261 72 83 chr10 4528331 4528565 -141060723 + L1MEc LINE L1 2150 2378 -4018 707 181 8 8 chr10 4528688 4528815 -141060473 - AluSq/x SINE Alu -184 129 3 1487 125 23 0 chr10 4528908 4529124 -141060164 + L1PA13 LINE L1 5939 6159 -4 21 0 0 0 chr10 4530760 4530781 -141058507 + AT_rich Low_complexity Low_complexity 1 21 0 396 0 0 0 chr10 4530817 4530861 -141058427 + (TAGA)n Simple_repeat Simple_repeat 1 44 0 210 313 56 49 chr10 4534527 4534671 -141054617 - MIR SINE MIR -21 241 97 257 256 13 13 chr10 4534824 4534902 -141054386 + MIR SINE MIR 184 261 -1 372 240 16 33 chr10 4535440 4535561 -141053727 - L1MC4a LINE L1 -1875 5933 5815 216 234 0 0 chr10 4535593 4535640 -141053648 - L2 LINE L2 -4 3309 3263 503 203 105 28 chr10 4535959 4536102 -141053186 + MER50 LTR ERV1 10 163 -571 1176 127 35 119 chr10 4536802 4537172 -141052116 + THE1C LTR MaLR 37 375 0 3578 156 9 9 chr10 4538393 4539222 -141050066 + L1PA13 LINE L1 5053 5882 -281 233 296 12 12 chr10 4540198 4540279 -141049009 + CT-rich Low_complexity Low_complexity 1 81 0 414 0 0 0 chr10 4540281 4540327 -141048961 + (CA)n Simple_repeat Simple_repeat 2 47 0 242 353 69 40 chr10 4540639 4540812 -141048476 - L2 LINE L2 -1408 1906 1729 207 100 0 0 chr10 4541790 4541820 -141047468 + (TG)n Simple_repeat Simple_repeat 2 31 0 638 138 88 6 chr10 4541936 4542096 -141047192 + L1MCa LINE L1 2280 2452 -3974 * 2747 166 27 27 chr10 4542093 4542621 -141046667 + L1MC1 LINE L1 5787 6317 -16 2445 55 0 21 chr10 4542621 4542936 -141046352 + L1PA8 LINE L1 5851 6169 -3 2747 166 27 27 chr10 4542936 4542954 -141046334 + L1MC1 LINE L1 6316 6333 0 36 23 0 0 chr10 4543219 4543262 -141046026 + AT_rich Low_complexity Low_complexity 1 43 0 2247 115 0 0 chr10 4543738 4544034 -141045254 - AluSq SINE Alu -17 296 1 1780 109 15 40 chr10 4544750 4545047 -141044241 + AluSq SINE Alu 47 336 0 2197 225 79 63 chr10 4545338 4546173 -141043115 - L1ME2 LINE L1 -34 6130 5283 2111 81 14 3 chr10 4546252 4546548 -141042740 - L1PA8 LINE L1 -5 6167 5869 1738 65 4 0 chr10 4546548 4546777 -141042511 + L1PA8 LINE L1 5648 5877 -295 210 80 60 20 chr10 4546795 4546845 -141042443 + (TA)n Simple_repeat Simple_repeat 1 52 0 600 276 123 78 chr10 4546855 4548814 -141040474 - L1ME LINE L1 -3550 2832 796 1347 247 7 3 chr10 4548887 4549170 -141040118 - AluJo SINE Alu -22 290 7 328 348 70 43 chr10 4549947 4550177 -141039111 - MIR SINE MIR -3 259 24 25 0 0 0 chr10 4551291 4551316 -141037972 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr10 4551703 4551732 -141037556 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr10 4552894 4552918 -141036370 + AT_rich Low_complexity Low_complexity 1 24 0 962 216 96 45 chr10 4553280 4553308 -141035980 + Charlie2 DNA MER1_type 2307 2332 -530 2219 119 12 3 chr10 4553308 4553651 -141035637 + L1PB1 LINE L1 5806 6151 0 962 216 96 45 chr10 4553651 4554070 -141035218 + Charlie2 DNA MER1_type 2332 2777 -85 1013 220 110 38 chr10 4554501 4554928 -141034360 - MLT1C LTR MaLR -4 463 6 406 242 37 58 chr10 4555992 4556182 -141033106 + Charlie2 DNA MER1_type 2596 2781 -81 655 176 25 17 chr10 4557067 4557186 -141032102 + FLAM_C SINE Alu 2 121 -12 1061 159 0 17 chr10 4557278 4557454 -141031834 + FRAM SINE Alu 4 176 0 406 318 38 30 chr10 4558905 4559141 -141030147 + MIR SINE MIR 24 261 -1 1728 156 0 73 chr10 4559591 4559905 -141029383 + AluJb SINE Alu 1 291 -21 395 16 62 0 chr10 4559905 4559969 -141029319 + (TA)n Simple_repeat Simple_repeat 2 69 0 317 277 39 0 chr10 4559983 4560113 -141029175 + L1ME4a LINE L1 5751 5885 -236 267 224 20 20 chr10 4560142 4560289 -141028999 + GA-rich Low_complexity Low_complexity 2 148 0 1853 93 0 19 chr10 4562253 4562522 -141026766 - L1PA8 LINE L1 -2 6170 5907 243 0 0 0 chr10 4562638 4562665 -141026623 + (CA)n Simple_repeat Simple_repeat 1 27 0 2233 86 0 20 chr10 4562829 4563131 -141026157 + AluY SINE Alu 1 296 -15 712 181 12 0 chr10 4563721 4563892 -141025396 + GA-rich Low_complexity Low_complexity 4 176 0 261 0 0 0 chr10 4563970 4563999 -141025289 + (TG)n Simple_repeat Simple_repeat 1 29 0 1986 110 0 7 chr10 4564197 4564534 -141024754 - AluSc SINE Alu 0 335 1 284 291 101 34 chr10 4564896 4565075 -141024213 - LTR33 LTR ERVL -78 443 253 294 299 162 25 chr10 4565083 4565367 -141023921 - ERVL LTR ERVL -865 4899 4577 402 254 134 69 chr10 4565475 4565707 -141023581 - MLT1H LTR MaLR -197 352 106 377 264 110 61 chr10 4565763 4566117 -141023171 - L1M4 LINE L1 -2486 3660 3280 2124 122 3 0 chr10 4566117 4566411 -141022877 - AluSx SINE Alu -17 295 1 377 264 110 61 chr10 4566411 4566484 -141022804 - L1M4 LINE L1 -2866 3280 3212 594 313 37 49 chr10 4566636 4566962 -141022326 + L3 LINE CR1 1139 1460 -117 4330 233 57 27 chr10 4566985 4568346 -141020942 + Charlie1a DNA MER1_type 39 1439 -16 201 337 22 11 chr10 4569427 4569519 -141019769 - L2 LINE L2 -1 3271 3179 369 189 82 61 chr10 4570352 4570548 -141018740 + Charlie1 DNA MER1_type 2471 2670 -91 * 773 192 87 9 chr10 4570542 4570771 -141018517 + Charlie5 DNA MER1_type 2330 2576 -36 2639 179 12 0 chr10 4570873 4571364 -141017924 + LOR1a LTR ERV1 1 497 0 22 88 0 0 chr10 4571896 4571953 -141017335 + AT_rich Low_complexity Low_complexity 1 57 0 37 39 0 0 chr10 4572111 4572162 -141017126 + AT_rich Low_complexity Low_complexity 1 51 0 484 291 91 25 chr10 4574601 4574918 -141014370 + L1ME LINE L1 5317 5661 -460 183 114 0 0 chr10 4576133 4576168 -141013120 + (TTCA)n Simple_repeat Simple_repeat 1 35 0 2555 162 36 0 chr10 4577312 4577757 -141011531 + LOR1b LTR ERV1 1 461 0 311 316 0 38 chr10 4579611 4579690 -141009598 - MIR SINE MIR -178 84 9 2291 144 58 16 chr10 4582510 4582940 -141006348 + L1PB3 LINE L1 5707 6154 0 44 20 0 0 chr10 4584048 4584099 -141005189 + AT_rich Low_complexity Low_complexity 1 51 0 367 189 38 13 chr10 4584560 4584719 -141004569 + (TA)n Simple_repeat Simple_repeat 1 163 0 1249 220 55 52 chr10 4584729 4585092 -141004196 - MLT2D LTR ERVL -40 374 11 827 210 66 0 chr10 4586015 4586196 -141003092 - LTR26 LTR ERV1 0 603 411 917 293 52 12 chr10 4586418 4586746 -141002542 - MER45C DNA AcHobo -611 342 2 180 351 108 0 chr10 4588169 4588243 -141001045 + MIR SINE MIR 64 145 -63 1793 180 91 29 chr10 4589309 4589726 -140999562 - MSTB2 LTR MaLR 0 457 15 1547 93 23 0 chr10 4593003 4593219 -140996069 - L1PA13 LINE L1 -4 6159 5939 2174 128 0 6 chr10 4593310 4593622 -140995666 + AluSx SINE Alu 1 310 -2 207 191 0 0 chr10 4593628 4593675 -140995613 + A-rich Low_complexity Low_complexity 1 47 0 374 238 115 46 chr10 4593793 4594054 -140995234 - L1MC5 LINE L1 -51 7910 7632 1248 79 0 0 chr10 4594056 4594208 -140995080 + AluSp/q SINE Alu 154 305 -8 2375 101 3 0 chr10 4595343 4595651 -140993637 + AluSp SINE Alu 1 309 -4 22 35 0 0 chr10 4596251 4596280 -140993008 + AT_rich Low_complexity Low_complexity 1 29 0 943 234 49 19 chr10 4596289 4596663 -140992625 - L1ME1 LINE L1 -19 6643 6238 641 269 92 8 chr10 4596659 4596897 -140992391 - L1ME1 LINE L1 -1221 5423 5166 * 1326 271 42 17 chr10 4596880 4597475 -140991813 - L1ME1 LINE L1 -2890 3754 3145 3000 258 45 45 chr10 4597485 4598542 -140990746 - L1ME1 LINE L1 -5458 1084 29 794 243 42 58 chr10 4598556 4598934 -140990354 - L1M4 LINE L1 -1377 4769 4398 26 0 0 0 chr10 4598940 4598966 -140990322 + AT_rich Low_complexity Low_complexity 1 26 0 669 165 177 0 chr10 4598967 4599125 -140990163 - L1MA8 LINE L1 -3 6288 6103 * 3347 160 29 7 chr10 4599123 4600178 -140989110 - L1MA8 LINE L1 -429 5883 4813 500 245 76 81 chr10 4600168 4600402 -140988886 - L1MDa LINE L1 -3890 2650 2417 * 1004 283 32 58 chr10 4600402 4600802 -140988486 + MLT1B LTR MaLR 1 390 0 500 245 76 81 chr10 4600802 4601035 -140988253 - L1MDa LINE L1 -4123 2417 2185 687 39 39 0 chr10 4601035 4601137 -140988151 + (TCTA)n Simple_repeat Simple_repeat 4 109 0 500 245 76 81 chr10 4601137 4601247 -140988041 - L1MDa LINE L1 -4355 2185 2076 1681 147 0 41 chr10 4601247 4601576 -140987712 - AluJb SINE Alu 0 319 3 500 245 76 81 chr10 4601576 4601727 -140987561 - L1MDa LINE L1 -4464 2076 1929 222 91 0 0 chr10 4602152 4602185 -140987103 + (TATG)n Simple_repeat Simple_repeat 3 35 0 23 0 0 0 chr10 4602386 4602409 -140986879 + AT_rich Low_complexity Low_complexity 1 23 0 381 205 0 12 chr10 4603855 4603938 -140985350 + HERVL LTR ERVL 4521 4602 -1052 1891 179 61 47 chr10 4603939 4604363 -140984925 - MSTB1 LTR MaLR 0 432 3 896 265 105 41 chr10 4604372 4604672 -140984616 + HERVL LTR ERVL 4643 4971 -793 975 244 55 88 chr10 4604672 4605057 -140984231 - MLT1A2 LTR MaLR -2 372 1 896 265 105 41 chr10 4605057 4605118 -140984170 + HERVL LTR ERVL 4971 5027 -737 2054 135 0 0 chr10 4605547 4605829 -140983459 + AluSc SINE Alu 1 282 -27 198 0 0 0 chr10 4605829 4605851 -140983437 + (TA)n Simple_repeat Simple_repeat 2 23 0 36 40 0 0 chr10 4605909 4605959 -140983329 + AT_rich Low_complexity Low_complexity 1 50 0 1006 250 14 0 chr10 4606234 4606446 -140982842 + MER58A DNA MER1_type 2 216 -8 286 132 15 29 chr10 4606606 4606674 -140982614 + CT-rich Low_complexity Low_complexity 4 70 0 598 234 140 27 chr10 4606797 4607054 -140982234 - L1M4 LINE L1 -3428 2718 2433 346 281 22 15 chr10 4607465 4607600 -140981688 + MIR SINE MIR 65 200 -62 1849 155 13 26 chr10 4607980 4608289 -140980999 - AluSx SINE Alu -6 306 2 24 0 0 0 chr10 4608410 4608434 -140980854 + AT_rich Low_complexity Low_complexity 1 24 0 2128 120 3 0 chr10 4608815 4609115 -140980173 + AluSx SINE Alu 1 301 -11 215 281 53 0 chr10 4609254 4609311 -140979977 + MIR SINE MIR 25 84 -178 2478 86 0 9 chr10 4609738 4610053 -140979235 + AluSq SINE Alu 2 313 0 272 222 9 0 chr10 4610862 4610970 -140978318 + (TG)n Simple_repeat Simple_repeat 1 109 0 396 271 0 0 chr10 4611005 4611175 -140978113 + (TG)n Simple_repeat Simple_repeat 2 171 0 1887 132 184 8 chr10 4611230 4611594 -140977694 - MSTA LTR MaLR 0 428 1 2270 89 0 0 chr10 4611772 4612076 -140977212 + AluY SINE Alu 1 304 0 200 303 26 0 chr10 4613449 4613525 -140975763 + MIR SINE MIR 184 261 -1 2317 107 0 0 chr10 4614652 4614943 -140974345 - AluSg SINE Alu -19 291 1 4008 210 35 79 chr10 4617072 4617185 -140972103 + L1MC/D LINE L1 4054 4170 -2028 2351 105 0 0 chr10 4617185 4617489 -140971799 + AluSg SINE Alu 1 304 -6 4008 210 35 79 chr10 4617489 4618486 -140970802 + L1MC/D LINE L1 4170 5073 -1125 1338 115 5 0 chr10 4618486 4618686 -140970602 - L1PB2 LINE L1 -2 6149 5949 4008 210 35 79 chr10 4618686 4619053 -140970235 + L1MC/D LINE L1 5073 5455 -743 208 283 75 17 chr10 4619284 4619404 -140969884 + L2 LINE L2 3146 3272 0 37 0 0 0 chr10 4620617 4620654 -140968634 + GC_rich Low_complexity Low_complexity 1 37 0 182 296 91 0 chr10 4621128 4621216 -140968072 - L2 LINE L2 -914 2400 2305 278 316 0 13 chr10 4621318 4621394 -140967894 + MER119 DNA MER1_type 2 76 -507 1165 172 39 19 chr10 4621397 4621653 -140967635 + L1ME3A LINE L1 5357 5617 -561 758 227 35 10 chr10 4622376 4622574 -140966714 - L1MA6 LINE L1 -155 6145 5943 258 207 2 32 chr10 4622780 4622843 -140966445 - MIR SINE MIR -87 121 59 214 330 35 26 chr10 4623253 4623368 -140965920 - MIR SINE MIR -56 152 37 991 134 0 0 chr10 4623924 4624066 -140965222 + AluSg/x SINE Alu 166 307 -5 2334 105 0 0 chr10 4625297 4625591 -140963697 + AluSg SINE Alu 1 294 -16 4627 134 89 66 chr10 4626658 4628100 -140961188 + pTR5 LTR ERV1 66 2438 0 194 297 195 0 chr10 4628786 4628904 -140960384 - MIR SINE MIR -17 245 105 254 314 57 0 chr10 4629231 4629336 -140959952 + MLT1J1 LTR MaLR 1 111 -335 402 261 137 12 chr10 4629346 4629507 -140959781 + MLT1J2 LTR MaLR 156 336 -114 233 222 269 19 chr10 4630447 4630555 -140958733 - L1ME4a LINE L1 0 6121 5987 182 328 0 0 chr10 4630889 4630947 -140958341 - L2 LINE L2 0 3272 3215 395 332 156 17 chr10 4631196 4631548 -140957740 - L2 LINE L2 -42 3230 2830 209 321 138 0 chr10 4631809 4631918 -140957370 - L2 LINE L2 -793 2521 2398 648 294 66 45 chr10 4632641 4632930 -140956358 + L2 LINE L2 3019 3313 0 394 264 40 34 chr10 4633444 4633592 -140955696 + L1ME3A LINE L1 5995 6143 -27 655 233 87 36 chr10 4633646 4633865 -140955423 + L1ME3A LINE L1 5707 5936 -234 343 231 154 15 chr10 4633909 4634039 -140955249 + L1ME3A LINE L1 6020 6167 -3 28 0 0 0 chr10 4636046 4636074 -140953214 + AT_rich Low_complexity Low_complexity 1 28 0 221 0 35 0 chr10 4636491 4636520 -140952768 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 226 240 144 89 chr10 4636525 4636671 -140952617 + MIR3 SINE MIR 39 192 -16 523 288 0 0 chr10 4637478 4637610 -140951678 + MIR SINE MIR 103 234 -28 228 258 148 13 chr10 4638445 4638600 -140950688 - MIR3 SINE MIR -16 192 17 234 105 0 0 chr10 4639375 4639413 -140949875 + (TAAAG)n Simple_repeat Simple_repeat 2 39 0 244 309 74 19 chr10 4639868 4640027 -140949261 - MIR3 SINE MIR -25 183 8 2520 121 3 3 chr10 4640454 4640818 -140948470 + THE1B LTR MaLR 1 364 0 344 247 37 0 chr10 4640887 4640968 -140948320 - MER5A DNA MER1_type -68 121 38 225 268 71 0 chr10 4640993 4641049 -140948239 + L2 LINE L2 3162 3221 -51 230 277 84 12 chr10 4642069 4642152 -140947136 - MIR SINE MIR -70 192 104 456 287 124 40 chr10 4642185 4643601 -140945687 + L1M4 LINE L1 3095 4677 -1469 261 216 0 0 chr10 4643611 4643662 -140945626 + L1ME2 LINE L1 6072 6122 -42 190 373 56 32 chr10 4644294 4644420 -140944868 - L2 LINE L2 -5 3267 3139 1089 184 20 110 chr10 4644587 4644949 -140944339 + L1MA7 LINE L1 5937 6277 -14 1871 144 7 0 chr10 4645038 4645344 -140943944 - AluJo SINE Alu -4 308 1 274 238 16 16 chr10 4645923 4645986 -140943302 - L2 LINE L2 -9 3263 3201 1937 132 0 0 chr10 4646000 4646273 -140943015 + AluSx SINE Alu 39 311 -1 1178 260 122 10 chr10 4646868 4647273 -140942015 + L1MC/D LINE L1 3742 4213 -1933 282 29 0 0 chr10 4647273 4647308 -140941980 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 1178 260 122 10 chr10 4647308 4647395 -140941893 + L1MC/D LINE L1 4213 4289 -1857 2411 86 0 0 chr10 4647422 4647723 -140941565 + AluSc SINE Alu 3 303 -6 1397 193 45 0 chr10 4647726 4647990 -140941298 + AluJo SINE Alu 1 276 -36 288 0 0 0 chr10 4648000 4648032 -140941256 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 2796 239 51 22 chr10 4648032 4648739 -140940549 + L1MC/D LINE L1 4321 5071 -1249 5223 82 1 0 chr10 4648739 4649432 -140939856 - L1PA8A LINE L1 -12 6119 5426 2796 239 51 22 chr10 4649432 4649952 -140939336 + L1MC/D LINE L1 5071 5575 -745 321 89 0 0 chr10 4652966 4653011 -140936277 + (CA)n Simple_repeat Simple_repeat 2 46 0 23 0 0 0 chr10 4653180 4653203 -140936085 + AT_rich Low_complexity Low_complexity 1 23 0 1321 262 104 33 chr10 4653793 4654426 -140934862 - MER20B DNA MER1_type -59 724 47 333 320 31 73 chr10 4654536 4654989 -140934299 + L2 LINE L2 1983 2416 -898 250 286 112 51 chr10 4655431 4655609 -140933679 + MLT1J LTR MaLR 1 189 -322 585 211 0 0 chr10 4655609 4655742 -140933546 + (TG)n Simple_repeat Simple_repeat 1 133 0 845 246 67 56 chr10 4655874 4656245 -140933043 + Charlie4a DNA MER1_type 43 421 -1540 1552 154 75 27 chr10 4656245 4656537 -140932751 - AluJo SINE Alu -6 306 1 845 246 67 56 chr10 4656537 4656595 -140932693 + Charlie4a DNA MER1_type 421 477 -31 702 251 6 6 chr10 4656788 4656951 -140932337 + MLT1C LTR MaLR 305 467 0 2203 238 45 52 chr10 4656955 4657781 -140931507 + MLT1C-int LTR MaLR 5 884 -487 1019 226 37 140 chr10 4657907 4658452 -140930836 + MLT1C-int LTR MaLR 944 1370 -1 411 185 70 135 chr10 4658459 4658659 -140930629 + MLT1C LTR MaLR 7 193 -197 342 259 68 68 chr10 4658798 4658941 -140930347 + MLT1K LTR MaLR 328 473 -115 13979 82 11 1 chr10 4658941 4661636 -140927652 + L1PA7 LINE L1 3440 6154 0 342 259 68 68 chr10 4661636 4661712 -140927576 + MLT1K LTR MaLR 472 547 -41 194 336 40 24 chr10 4661895 4662020 -140927268 - MIR3 SINE MIR -43 165 39 922 9 0 0 chr10 4662275 4662380 -140926908 + L1PA3 LINE L1 6050 6154 -1 207 204 0 0 chr10 4662394 4662438 -140926850 + A-rich Low_complexity Low_complexity 1 44 0 423 273 239 14 chr10 4662465 4662754 -140926534 - L2 LINE L2 0 3272 2919 2570 47 0 22 chr10 4663478 4663796 -140925492 + AluY SINE Alu 1 311 0 2839 206 8 2 chr10 4663940 4664468 -140924820 + MER41D LTR ERV1 1 531 -26 26 0 0 0 chr10 4664511 4664537 -140924751 + AT_rich Low_complexity Low_complexity 1 26 0 238 152 0 0 chr10 4664870 4664916 -140924372 - L1ME3 LINE L1 -7 6155 6110 2812 256 131 26 chr10 4664985 4667180 -140922108 - L1ME3 LINE L1 -197 5967 3497 315 171 103 51 chr10 4667299 4667416 -140921872 - L1ME3 LINE L1 -2863 3283 3161 522 271 29 25 chr10 4667419 4667659 -140921629 - L1ME3 LINE L1 -3090 3056 2816 258 244 24 0 chr10 4667721 4667803 -140921485 - L1ME3 LINE L1 -3227 2919 2836 2097 117 10 13 chr10 4667958 4668265 -140921023 - AluSx SINE Alu -2 310 5 21 0 0 0 chr10 4670677 4670698 -140918590 + AT_rich Low_complexity Low_complexity 1 21 0 526 255 93 32 chr10 4671214 4671461 -140917827 - MIR SINE MIR 0 262 1 196 394 0 14 chr10 4673879 4673950 -140915338 - L2 LINE L2 -86 3186 3117 341 228 196 19 chr10 4675567 4675725 -140913563 - MER5A DNA MER1_type 0 189 4 2284 210 33 48 chr10 4676937 4677569 -140911719 - L1MC3 LINE L1 -2 7783 7161 265 67 0 3 chr10 4677570 4677805 -140911483 + AluY SINE Alu 1 313 0 6691 236 74 41 chr10 4677806 4679637 -140909651 - L1MC3 LINE L1 -617 7168 5398 1976 131 40 0 chr10 4679637 4679811 -140909477 - AluSx SINE Alu -3 309 117 270 0 0 0 chr10 4679811 4679841 -140909447 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1976 131 40 0 chr10 4679841 4679963 -140909325 - AluSx SINE Alu -195 117 1 6691 236 74 41 chr10 4679963 4680315 -140908973 - L1MC3 LINE L1 -2387 5398 5059 1236 138 20 5 chr10 4680315 4680518 -140908770 - L1PB1 LINE L1 -1 6150 5945 6691 236 74 41 chr10 4680518 4681823 -140907465 - L1MC3 LINE L1 -2726 5059 3564 964 232 34 0 chr10 4681930 4682193 -140907095 + L1MA4 LINE L1 6025 6296 -4 347 235 145 70 chr10 4682350 4682550 -140906738 - HAL1 LINE L1 -2288 219 5 269 239 128 60 chr10 4683508 4683625 -140905663 + MER69 DNA AcHobo 1 125 -2401 25 0 0 0 chr10 4685216 4685241 -140904047 + AT_rich Low_complexity Low_complexity 1 25 0 205 202 0 146 chr10 4687829 4687918 -140901370 - L2 LINE L2 -514 2800 2725 23 33 0 0 chr10 4688136 4688166 -140901122 + AT_rich Low_complexity Low_complexity 1 30 0 288 294 15 0 chr10 4688176 4688244 -140901044 - MIR3 SINE MIR -24 184 116 248 151 0 19 chr10 4688583 4688636 -140900652 + GA-rich Low_complexity Low_complexity 1 52 0 39 38 0 0 chr10 4689249 4689302 -140899986 + AT_rich Low_complexity Low_complexity 1 53 0 238 210 110 60 chr10 4690233 4690333 -140898955 + MIR3 SINE MIR 83 187 -21 674 239 54 84 chr10 4690409 4690744 -140898544 - MER46C DNA MER2_type -13 325 1 1716 189 20 3 chr10 4691156 4691506 -140897782 - MER89 LTR ERV1 -4 555 200 766 192 26 6 chr10 4691529 4691685 -140897603 - FRAM SINE Alu -17 159 1 1253 278 91 25 chr10 4692804 4693289 -140895999 - LTR40a LTR ERVL 0 519 3 278 231 0 0 chr10 4693294 4693346 -140895942 - HERVL40 LTR ERVL -35 5495 5444 276 291 110 8 chr10 4693499 4693626 -140895662 + MER58B DNA MER1_type 199 338 -3 349 102 169 0 chr10 4694146 4694205 -140895083 - MER85 DNA T2_type -66 73 5 493 291 89 11 chr10 4694207 4694386 -140894902 + HERVL40 LTR ERVL 1219 1411 -4119 420 20 0 0 chr10 4694562 4694611 -140894677 + MER85 DNA T2_type 89 137 -2 1902 138 22 38 chr10 4695837 4696159 -140893129 - L1MB3 LINE L1 -4 6179 5862 2104 109 3 0 chr10 4696159 4696452 -140892836 + AluSx SINE Alu 1 294 -18 1902 138 22 38 chr10 4696452 4696498 -140892790 - L1MB3 LINE L1 -321 5862 5817 263 48 0 48 chr10 4697737 4697779 -140891509 + (TTCC)n Simple_repeat Simple_repeat 1 40 0 204 150 33 33 chr10 4697791 4697851 -140891437 + CT-rich Low_complexity Low_complexity 4 63 0 184 30 61 0 chr10 4698076 4698109 -140891179 + T-rich Low_complexity Low_complexity 1 35 0 265 196 20 0 chr10 4698329 4698380 -140890908 - MLT1G1 LTR MaLR 0 595 544 22 35 0 0 chr10 4698648 4698677 -140890611 + AT_rich Low_complexity Low_complexity 1 29 0 21 71 0 0 chr10 4698703 4698745 -140890543 + AT_rich Low_complexity Low_complexity 1 42 0 255 257 0 0 chr10 4698772 4698873 -140890415 + (TG)n Simple_repeat Simple_repeat 1 101 0 253 340 9 28 chr10 4700496 4700602 -140888686 - MIR3 SINE MIR -10 198 95 2032 205 66 5 chr10 4700848 4701257 -140888031 - MER70A LTR ERVL 0 472 39 303 93 0 0 chr10 4701268 4701311 -140887977 + (TG)n Simple_repeat Simple_repeat 2 44 0 206 312 80 24 chr10 4703328 4703453 -140885835 - L2 LINE L2 -2 3311 3180 802 303 33 63 chr10 4704146 4704575 -140884713 + L2 LINE L2 2898 3313 0 211 333 0 0 chr10 4705297 4705360 -140883928 - L2 LINE L2 0 3272 3210 1738 188 7 0 chr10 4705944 4706253 -140883035 + AluJb SINE Alu 2 312 0 36 0 0 0 chr10 4708236 4708272 -140881016 + AT_rich Low_complexity Low_complexity 1 36 0 2541 44 0 0 chr10 4708840 4709136 -140880152 + AluY SINE Alu 2 297 -14 302 301 0 49 chr10 4709387 4709510 -140879778 - MIR SINE MIR -70 192 76 2377 126 30 13 chr10 4710188 4710584 -140878704 - MER57A LTR ERV1 0 403 1 214 273 13 39 chr10 4711711 4711788 -140877500 + MIR SINE MIR 66 140 -68 356 319 76 38 chr10 4712643 4712960 -140876328 - L1M4 LINE L1 -1627 4519 4191 1034 244 78 36 chr10 4712972 4713394 -140875894 - MLT1C LTR MaLR 0 467 17 881 164 56 119 chr10 4713424 4713693 -140875595 - MLT1C-int LTR MaLR -1 1370 1119 1375 294 83 45 chr10 4713696 4714303 -140874985 - L1ME LINE L1 -4600 1480 898 2128 133 3 0 chr10 4714303 4714611 -140874677 - AluSx SINE Alu -3 309 1 1375 294 83 45 chr10 4714611 4715427 -140873861 - L1ME LINE L1 -5182 898 6 34 42 0 0 chr10 4716258 4716306 -140872982 + AT_rich Low_complexity Low_complexity 1 48 0 390 245 109 43 chr10 4716927 4717111 -140872177 + MIR SINE MIR 53 248 -14 21 0 0 0 chr10 4717155 4717176 -140872112 + AT_rich Low_complexity Low_complexity 1 21 0 1883 242 7 4 chr10 4717710 4718629 -140870659 + L1MB7 LINE L1 5 1061 -5481 1671 249 54 7 chr10 4718663 4719104 -140870184 + MLT1C LTR MaLR 6 467 0 2835 251 95 41 chr10 4719109 4719864 -140869424 + L1MB7 LINE L1 1201 1913 -4731 1657 189 0 11 chr10 4719864 4720149 -140869139 + AluJb SINE Alu 1 282 -30 2835 251 95 41 chr10 4720149 4721811 -140867477 + L1MB7 LINE L1 1913 3749 -2895 1277 226 22 38 chr10 4721821 4722139 -140867149 + MLT1A1 LTR MaLR 11 323 -42 5464 225 69 39 chr10 4722159 4724980 -140864308 + L1MB7 LINE L1 3754 6659 -23 1276 168 5 23 chr10 4724993 4725213 -140864075 + AluSx SINE Alu 1 216 -96 945 140 0 0 chr10 4725213 4725363 -140863925 + AluSg/x SINE Alu 154 303 -9 209 368 58 32 chr10 4725664 4725819 -140863469 - MIR SINE MIR -39 223 65 1511 174 102 7 chr10 4727020 4727325 -140861963 + MER1B DNA MER1_type 3 336 -1 1970 140 0 0 chr10 4728702 4728988 -140860300 - AluSx SINE Alu -23 289 4 323 308 8 15 chr10 4729265 4729395 -140859893 + GA-rich Low_complexity Low_complexity 2 130 0 2146 122 10 0 chr10 4730413 4730709 -140858579 + AluSc SINE Alu 1 299 -10 6238 158 54 6 chr10 4731417 4732591 -140856697 + Tigger3b DNA MER2_type 1 1230 -1 271 219 16 65 chr10 4732626 4732749 -140856539 + (CATATA)n Simple_repeat Simple_repeat 2 118 0 349 236 0 50 chr10 4733293 4733475 -140855813 - L1ME4a LINE L1 -11 6110 5938 27 49 0 0 chr10 4733508 4733549 -140855739 + AT_rich Low_complexity Low_complexity 1 41 0 1106 228 114 17 chr10 4734165 4734525 -140854763 + MSTD LTR MaLR 1 395 -1 286 228 134 20 chr10 4735241 4735390 -140853898 + L1 LINE L1 4899 5064 -1082 21 0 0 0 chr10 4735712 4735733 -140853555 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr10 4736648 4736674 -140852614 + AT_rich Low_complexity Low_complexity 1 26 0 34 79 0 0 chr10 4737096 4737172 -140852116 + AT_rich Low_complexity Low_complexity 1 76 0 201 286 0 0 chr10 4739704 4739753 -140849535 + L2 LINE L2 3139 3187 -85 585 255 104 24 chr10 4741306 4741557 -140847731 + MLT1F1 LTR MaLR 2 272 -295 2066 103 7 35 chr10 4741822 4742132 -140847156 - AluSx SINE Alu 0 312 12 1097 291 161 78 chr10 4744142 4745250 -140844038 - L2 LINE L2 -27 3286 2271 3578 130 30 17 chr10 4745250 4745852 -140843436 - MER4B LTR ERV1 0 610 1 1097 291 161 78 chr10 4745852 4746890 -140842398 - L2 LINE L2 -1042 2271 969 1709 248 108 24 chr10 4746901 4747478 -140841810 + MLT1E2 LTR MaLR 1 625 -1 219 360 23 23 chr10 4747519 4747691 -140841597 - L2 LINE L2 -2424 890 719 182 333 0 0 chr10 4748908 4748956 -140840332 + L2 LINE L2 3207 3254 -18 333 259 36 9 chr10 4750986 4751098 -140838190 - MIR3 SINE MIR -5 203 89 244 234 75 56 chr10 4751529 4751636 -140837652 + HAL1 LINE L1 1914 2022 -485 1824 291 128 39 chr10 4751716 4752924 -140836364 - L2 LINE L2 -365 2949 1635 306 290 155 27 chr10 4753315 4753650 -140835638 + HAL1 LINE L1 2066 2443 -64 207 167 0 0 chr10 4754376 4754418 -140834870 + T-rich Low_complexity Low_complexity 1 42 0 180 0 0 0 chr10 4754738 4754758 -140834530 + (T)n Simple_repeat Simple_repeat 1 20 0 246 190 13 25 chr10 4755082 4755161 -140834127 + (TA)n Simple_repeat Simple_repeat 2 79 0 1043 166 6 0 chr10 4755750 4755925 -140833363 - L1PB3 LINE L1 -11 6143 5968 181 354 10 21 chr10 4756416 4756512 -140832776 + L2 LINE L2 3141 3235 -37 2026 167 12 19 chr10 4756548 4757062 -140832226 + MER39B LTR ERV1 1 603 -50 950 156 182 36 chr10 4757062 4757354 -140831934 - MER61C LTR ERV1 0 434 1 400 315 105 55 chr10 4757456 4758041 -140831247 - L1 LINE L1 -1980 4370 3751 29 28 0 0 chr10 4759974 4760010 -140829278 + AT_rich Low_complexity Low_complexity 1 36 0 1311 102 0 0 chr10 4760475 4760677 -140828611 - AluSg/x SINE Alu 0 318 117 232 152 121 15 chr10 4761136 4761202 -140828086 - MIR SINE MIR -33 229 157 204 355 16 32 chr10 4763183 4763307 -140825981 - MIR SINE MIR -112 150 29 2366 116 16 13 chr10 4763415 4763787 -140825501 + THE1C LTR MaLR 3 375 0 381 158 0 0 chr10 4768324 4768406 -140820882 + GA-rich Low_complexity Low_complexity 2 83 0 23 0 0 0 chr10 4769396 4769419 -140819869 + AT_rich Low_complexity Low_complexity 1 23 0 3727 143 40 22 chr10 4769421 4770141 -140819147 - L1MA7 LINE L1 -3 6288 5556 2821 293 52 52 chr10 4770149 4771559 -140817729 - L1 LINE L1 -4870 1411 1 1392 257 84 53 chr10 4772983 4774103 -140815185 + L1MB7 LINE L1 2 1334 -5208 1238 219 23 23 chr10 4774106 4774408 -140814880 + MER21B-int LTR ERV1 3848 4149 -42 3334 236 47 20 chr10 4774483 4775313 -140813975 + MER21B LTR ERV1 1 852 -11 2063 236 36 51 chr10 4775322 4776103 -140813185 + L1MB7 LINE L1 1325 2093 -4553 258 32 0 0 chr10 4776134 4776165 -140813123 + (TG)n Simple_repeat Simple_repeat 2 32 0 192 77 0 0 chr10 4776164 4776190 -140813098 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 875 228 0 0 chr10 4776261 4776428 -140812860 - MLT2C1 LTR ERVL -61 336 170 3972 205 59 19 chr10 4776429 4777391 -140811897 + L1MC2 LINE L1 5344 6344 0 3726 230 40 37 chr10 4777382 4777989 -140811299 + L1MB7 LINE L1 5186 5789 -893 * 1973 129 7 14 chr10 4777989 4778284 -140811004 + AluSx SINE Alu 7 299 -13 3726 230 40 37 chr10 4778284 4779133 -140810155 + L1MB7 LINE L1 5789 6662 -20 30 45 0 0 chr10 4779736 4779780 -140809508 + AT_rich Low_complexity Low_complexity 1 44 0 684 209 19 28 chr10 4782573 4782784 -140806504 - Charlie5 DNA MER1_type -15 2597 2389 246 105 0 0 chr10 4782797 4782835 -140806453 + (TA)n Simple_repeat Simple_repeat 1 38 0 424 251 123 25 chr10 4783164 4783399 -140805889 - LTR16A LTR ERVL -161 289 32 428 220 10 0 chr10 4783460 4783560 -140805728 + L1MA9 LINE L1 6047 6147 -165 942 76 52 6 chr10 4783580 4783752 -140805536 + GA-rich Low_complexity Low_complexity 1 180 0 267 79 0 0 chr10 4783752 4783790 -140805498 + (GGAA)n Simple_repeat Simple_repeat 3 40 0 301 215 118 0 chr10 4783813 4783906 -140805382 + L1MA9 LINE L1 6170 6273 -39 261 315 55 20 chr10 4785079 4785225 -140804063 + MLT1L LTR MaLR 465 615 0 25 0 0 0 chr10 4785332 4785357 -140803931 + AT_rich Low_complexity Low_complexity 1 25 0 26 64 0 0 chr10 4786052 4786099 -140803189 + AT_rich Low_complexity Low_complexity 1 47 0 1927 156 0 10 chr10 4786153 4786454 -140802834 - AluJb SINE Alu -14 298 1 2236 156 46 5 chr10 4786479 4786890 -140802398 + MSTA LTR MaLR 1 428 0 350 290 194 53 chr10 4786890 4787549 -140801739 + L1M4 LINE L1 2735 3486 -2660 4950 138 31 42 chr10 4787653 4788562 -140800726 - MER49 LTR ERV1 -24 899 1 1907 239 102 47 chr10 4788706 4789108 -140800180 - L1MC4 LINE L1 -343 7699 7320 1951 143 50 34 chr10 4789108 4789466 -140799822 + THE1B LTR MaLR 1 364 0 1907 239 102 47 chr10 4789466 4789802 -140799486 - L1MC4 LINE L1 -722 7320 6921 22 35 0 0 chr10 4789804 4789833 -140799455 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr10 4790137 4790166 -140799122 + AT_rich Low_complexity Low_complexity 1 29 0 28 0 0 0 chr10 4792324 4792352 -140796936 + AT_rich Low_complexity Low_complexity 1 28 0 7659 33 3 1 chr10 4792352 4793282 -140796006 - L1PA3 LINE L1 -3 6152 5210 544 295 108 38 chr10 4793546 4793915 -140795373 - L2 LINE L2 0 3313 2919 382 264 9 9 chr10 4793980 4794090 -140795198 + L2 LINE L2 2154 2263 -1051 959 134 210 0 chr10 4794276 4794462 -140794826 + AluSp SINE Alu 83 307 -6 21 57 0 0 chr10 4794617 4794652 -140794636 + AT_rich Low_complexity Low_complexity 1 35 0 1423 158 36 43 chr10 4795495 4795774 -140793514 - AluJo SINE Alu -19 293 17 369 320 51 37 chr10 4796687 4796819 -140792469 - L1ME LINE L1 -338 5783 5654 2193 96 4 0 chr10 4796819 4797127 -140792161 - AluSg SINE Alu 0 309 1 369 320 51 37 chr10 4797127 4797287 -140792001 - L1ME LINE L1 -467 5654 5486 22 0 0 0 chr10 4797357 4797379 -140791909 + AT_rich Low_complexity Low_complexity 1 22 0 396 252 176 25 chr10 4797784 4797943 -140791345 - MIR SINE MIR -4 258 76 236 260 39 0 chr10 4798057 4798134 -140791154 - MER116 DNA Mariner 0 80 1 23 78 0 0 chr10 4798161 4798212 -140791076 + AT_rich Low_complexity Low_complexity 1 51 0 1467 280 83 26 chr10 4798308 4799065 -140790223 + L1M4 LINE L1 3758 4557 -1589 282 303 92 26 chr10 4799784 4799936 -140789352 - HERV16 LTR ERVL -3819 1177 1016 297 326 64 35 chr10 4800302 4800474 -140788814 - MIR SINE MIR -71 191 15 298 319 6 75 chr10 4800730 4800890 -140788398 + MER5A DNA MER1_type 35 183 -6 189 107 0 0 chr10 4803614 4803642 -140785646 + (T)n Simple_repeat Simple_repeat 1 28 0 272 260 250 0 chr10 4804329 4804429 -140784859 - L2 LINE L2 0 3313 3189 29 28 0 0 chr10 4804663 4804699 -140784589 + AT_rich Low_complexity Low_complexity 1 36 0 363 282 99 42 chr10 4805072 4805214 -140784074 - MER5B DNA MER1_type -27 151 2 447 263 67 89 chr10 4807306 4807765 -140781523 - MLT1E LTR MaLR -101 534 1 1301 270 20 5 chr10 4807765 4808169 -140781119 + L1M4 LINE L1 3718 4127 -2019 852 167 0 0 chr10 4808171 4808297 -140780991 + AluJb SINE Alu 164 289 -23 445 234 138 5 chr10 4808304 4808492 -140780796 + L1M4 LINE L1 4626 4838 -1308 228 284 75 75 chr10 4808736 4808870 -140780418 + MLT1H LTR MaLR 400 533 -16 192 77 0 0 chr10 4809398 4809424 -140779864 + (A)n Simple_repeat Simple_repeat 1 26 0 4361 164 73 32 chr10 4809968 4810854 -140778434 + MER49 LTR ERV1 1 923 0 401 282 34 0 chr10 4810980 4811039 -140778249 - L1MA10 LINE L1 -1 6333 6275 1371 258 38 21 chr10 4811039 4811515 -140777773 - L1ME1 LINE L1 -54 6112 5629 697 207 14 7 chr10 4811538 4811678 -140777610 + MLT1A1 LTR MaLR 1 141 -224 2262 51 0 0 chr10 4811709 4811985 -140777303 - L1PA5 LINE L1 -13 6141 5866 1435 64 30 0 chr10 4811985 4812188 -140777100 + L1P LINE L1 5195 5403 -743 1334 160 26 0 chr10 4812198 4812429 -140776859 + MLT1A1 LTR MaLR 127 363 -2 305 303 111 25 chr10 4812429 4812591 -140776697 - L1ME1 LINE L1 -547 5615 5440 947 198 70 107 chr10 4812600 4812792 -140776496 - L1ME1 LINE L1 -1117 5029 4831 864 181 45 77 chr10 4812792 4813013 -140776275 + MER20 DNA MER1_type 2 215 -4 947 198 70 107 chr10 4813013 4813249 -140776039 - L1ME1 LINE L1 -1315 4831 4617 6233 258 52 34 chr10 4813255 4813658 -140775630 - L1M4 LINE L1 -1300 4846 4452 1580 194 0 14 chr10 4813658 4813942 -140775346 - AluJo SINE Alu -32 280 1 6233 258 52 34 chr10 4813942 4816222 -140773066 - L1M4 LINE L1 -1694 4452 2113 1060 303 125 8 chr10 4816239 4817192 -140772096 - L1MDa LINE L1 -5313 1227 20 367 151 40 0 chr10 4817713 4817839 -140771449 + (TA)n Simple_repeat Simple_repeat 2 132 0 3795 152 102 67 chr10 4817839 4818710 -140770578 + MER21A LTR ERV1 13 914 -17 34 42 0 0 chr10 4819038 4819086 -140770202 + AT_rich Low_complexity Low_complexity 1 48 0 189 195 0 0 chr10 4820115 4820156 -140769132 + (TG)n Simple_repeat Simple_repeat 2 42 0 379 257 36 12 chr10 4820242 4820470 -140768818 + L1ME LINE L1 1352 1747 -4951 1064 240 86 17 chr10 4820499 4820926 -140768362 + L1ME LINE L1 5813 6286 -675 189 0 0 0 chr10 4820926 4820947 -140768341 + (TTAAA)n Simple_repeat Simple_repeat 5 25 0 1064 240 86 17 chr10 4820947 4821157 -140768131 + L1ME LINE L1 6286 6480 -481 1663 168 44 3 chr10 4821235 4821772 -140767516 + LTR26 LTR ERV1 1 603 0 1948 241 109 21 chr10 4821786 4822418 -140766870 - MER76 LTR ERV 0 688 1 23 0 0 0 chr10 4824328 4824351 -140764937 + AT_rich Low_complexity Low_complexity 1 23 0 261 218 0 0 chr10 4824917 4824972 -140764316 + C-rich Low_complexity Low_complexity 1 55 0 447 150 0 0 chr10 4825138 4825218 -140764070 + L1MA3 LINE L1 6226 6305 0 2227 116 0 19 chr10 4827067 4827386 -140761902 + AluSq SINE Alu 1 313 0 410 355 133 33 chr10 4827871 4828632 -140760656 - L2 LINE L2 -411 2903 2067 233 268 16 65 chr10 4828739 4828862 -140760426 + L1MCb LINE L1 421 537 -5885 943 225 25 49 chr10 4828866 4829191 -140760097 - LTR57 LTR ERVL 0 411 95 332 377 60 20 chr10 4829387 4829639 -140759649 - L2 LINE L2 -792 2522 2261 2027 223 12 0 chr10 4830057 4830456 -140758832 - LTR57 LTR ERVL 0 411 8 1558 275 67 28 chr10 4830688 4831793 -140757495 + L1MCb LINE L1 1215 2563 -4559 2117 201 21 23 chr10 4831796 4832328 -140756960 - L1MA9 LINE L1 -1 6311 5781 1333 268 47 32 chr10 4832328 4832585 -140756703 + L1MCb LINE L1 2863 3115 -3826 683 216 31 0 chr10 4832585 4832747 -140756541 + L1MB7 LINE L1 6010 6176 -8 1333 268 47 32 chr10 4832747 4833348 -140755940 + L1MCb LINE L1 3115 3698 -3243 3973 188 13 11 chr10 4834067 4834816 -140754472 + L1PA13 LINE L1 1114 1864 -4923 268 299 49 56 chr10 4834852 4834996 -140754292 - MIR3 SINE MIR -65 143 1 1225 151 103 0 chr10 4836890 4837122 -140752166 - L1MA8 LINE L1 -41 6250 5995 748 167 7 21 chr10 4837792 4837936 -140751352 + FRAM SINE Alu 11 152 -24 22 35 0 0 chr10 4838713 4838742 -140750546 + AT_rich Low_complexity Low_complexity 1 29 0 394 261 84 14 chr10 4838874 4839016 -140750272 - MIR3 SINE MIR -33 175 24 204 97 0 0 chr10 4839684 4839715 -140749573 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 22 0 0 0 chr10 4839989 4840011 -140749277 + AT_rich Low_complexity Low_complexity 1 22 0 292 362 9 0 chr10 4840481 4840586 -140748702 - MER5A DNA MER1_type -80 109 4 352 304 76 49 chr10 4840597 4840781 -140748507 + MER5A DNA MER1_type 1 189 0 820 140 47 0 chr10 4841024 4841174 -140748114 - MER5A DNA MER1_type -22 167 11 28 29 0 0 chr10 4841681 4841716 -140747572 + AT_rich Low_complexity Low_complexity 1 35 0 984 211 122 96 chr10 4842243 4842666 -140746622 - MER66A LTR ERV1 -5 579 179 2101 147 0 0 chr10 4842666 4842978 -140746310 - AluSx SINE Alu 0 312 1 984 211 122 96 chr10 4842978 4843064 -140746224 - MER66A LTR ERV1 -405 179 97 642 296 32 20 chr10 4843130 4843471 -140745817 - L1MC/D LINE L1 -2172 5636 5292 1998 132 3 0 chr10 4843644 4843940 -140745348 + AluSc SINE Alu 1 297 -12 473 268 81 4 chr10 4844173 4844419 -140744869 - L1MC/D LINE L1 -2817 3329 3065 384 220 18 9 chr10 4844448 4844557 -140744731 + L1ME LINE L1 5000 5109 -1037 301 97 0 88 chr10 4844707 4844820 -140744468 + (TAAA)n Simple_repeat Simple_repeat 2 104 0 1606 223 26 37 chr10 4844826 4845355 -140743933 + L1ME LINE L1 5157 5683 -483 2335 85 0 26 chr10 4846921 4847263 -140742025 - L1PA8 LINE L1 -2 6170 5838 21 0 0 0 chr10 4847412 4847433 -140741855 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr10 4848721 4848749 -140740539 + AT_rich Low_complexity Low_complexity 1 28 0 245 322 0 11 chr10 4849788 4849878 -140739410 + (CA)n Simple_repeat Simple_repeat 1 89 0 251 233 17 0 chr10 4850030 4850090 -140739198 - MLT1G1 LTR MaLR 0 595 535 23 0 0 0 chr10 4850657 4850680 -140738608 + AT_rich Low_complexity Low_complexity 1 23 0 2190 116 7 0 chr10 4850867 4851159 -140738129 + AluSc SINE Alu 6 299 -10 317 228 12 64 chr10 4851231 4851402 -140737886 + L1MEd LINE L1 1055 1216 -4903 200 189 0 0 chr10 4851449 4851486 -140737802 + (TG)n Simple_repeat Simple_repeat 2 38 0 231 300 120 10 chr10 4852171 4852271 -140737017 + MLT1I LTR MaLR 31 141 -268 2280 91 0 0 chr10 4852991 4853288 -140736000 - AluY SINE Alu -14 297 1 605 270 17 31 chr10 4854038 4854291 -140734997 + MER77 LTR ERV1 450 745 -7 2282 241 55 29 chr10 4854322 4855123 -140734165 + MER77-int LTR ERV1 3261 4130 -61 1531 265 81 21 chr10 4855657 4856174 -140733114 + MER77 LTR ERV1 51 598 -7 322 288 16 16 chr10 4856184 4856309 -140732979 + L1MC4 LINE L1 7434 7558 -484 243 272 29 39 chr10 4856436 4856539 -140732749 - MLT1K LTR MaLR -347 241 140 1601 169 20 30 chr10 4857143 4857444 -140731844 - AluJo SINE Alu -14 298 1 232 211 0 18 chr10 4858534 4858591 -140730697 + A-rich Low_complexity Low_complexity 3 58 0 22 0 0 0 chr10 4858817 4858839 -140730449 + AT_rich Low_complexity Low_complexity 1 22 0 36867 93 20 19 chr10 4959554 4965289 -140623999 + Harlequin LTR ERV1 17 4944 0 608 195 43 43 chr10 4965290 4965592 -140623696 + Harlequin LTR ERV1 840 1141 -5755 * 8756 94 72 69 chr10 4965588 4968095 -140621193 + pTR5 LTR ERV1 504 8399 0 2258 105 0 10 chr10 4968488 4968784 -140620504 - AluSx SINE Alu -19 293 1 247 308 75 0 chr10 4970144 4970264 -140619024 + L1MC4 LINE L1 6929 7057 -985 241 264 109 29 chr10 4970449 4970623 -140618665 + L1M4 LINE L1 4415 4602 -1544 204 177 38 25 chr10 4971251 4971330 -140617958 + (TA)n Simple_repeat Simple_repeat 2 81 0 982 282 111 24 chr10 4971392 4971843 -140617445 + MLT1H LTR MaLR 43 532 -17 278 142 12 6 chr10 4972065 4972312 -140616976 + AluSq SINE Alu 1 306 -2 269 194 45 0 chr10 4972864 4972931 -140616357 + MER5A DNA MER1_type 7 76 -113 262 361 0 0 chr10 4973470 4973589 -140615699 + L1MC4 LINE L1 6888 7006 -1036 26 0 0 0 chr10 4973621 4973647 -140615641 + AT_rich Low_complexity Low_complexity 1 26 0 21 36 0 0 chr10 4973908 4973936 -140615352 + AT_rich Low_complexity Low_complexity 1 28 0 344 230 80 102 chr10 4974120 4974481 -140614807 + L1MC4 LINE L1 7690 8042 0 1771 62 0 37 chr10 4974701 4974945 -140614343 + L1P LINE L1 553 787 -5359 * 15140 48 3 2 chr10 4974943 4976812 -140612476 + L1P LINE L1 2466 4335 -1811 29263 26 1 0 chr10 4976912 4981100 -140608188 + L1PA3 LINE L1 1967 6155 0 381 308 64 0 chr10 4981102 4981258 -140608030 + HERVL LTR ERVL 293 458 -5306 330 356 40 7 chr10 4981249 4981398 -140607890 + HERVL LTR ERVL 126 279 -5375 * 688 250 0 0 chr10 4981408 4981568 -140607720 - L1P LINE L1 -928 5218 5059 1967 208 45 14 chr10 4981678 4982097 -140607191 - MSTB1 LTR MaLR 0 432 1 2296 253 20 42 chr10 4982110 4982707 -140606581 - MSTB1-int LTR MaLR -92 1559 976 239 247 21 32 chr10 4982949 4983042 -140606246 + GA-rich Low_complexity Low_complexity 5 96 0 722 229 85 106 chr10 4983104 4983576 -140605712 - MER4C LTR ERV1 0 465 4 268 270 14 0 chr10 4983613 4983687 -140605601 - MER4C-int LTR ERV1 -126 6472 6398 7491 185 53 22 chr10 4983816 4985560 -140603728 - MER4C-int LTR ERV1 -575 5756 3959 4248 140 15 58 chr10 4985560 4986282 -140603006 - LTR8 LTR ERV1 0 691 1 2333 114 0 0 chr10 4986297 4986596 -140602692 - AluSx SINE Alu -13 299 1 2552 151 73 14 chr10 4986596 4987033 -140602255 - HUERS-P1 LTR ERV1 -7 6256 5794 323 239 114 0 chr10 4987043 4987131 -140602157 + LTR49-int LTR ERV1 6045 6142 -189 1031 184 22 0 chr10 4987143 4987328 -140601960 + LTR49-int LTR ERV1 5816 6004 -327 902 120 84 0 chr10 4987342 4987484 -140601804 - MER39B LTR ERV1 -499 154 1 497 204 19 0 chr10 4987484 4987584 -140601704 + LTR49 LTR ERV1 492 593 -2 486 320 31 16 chr10 4987603 4987797 -140601491 - LTR40a LTR ERVL -322 197 1 314 274 63 84 chr10 4987797 4987987 -140601301 + L2 LINE L2 3128 3313 0 2130 117 163 14 chr10 4988217 4988586 -140600702 - MSTA LTR MaLR -4 424 1 525 240 91 39 chr10 4989892 4990146 -140599142 + ORSL DNA AcHobo 9 275 0 260 284 93 47 chr10 4990551 4990787 -140598501 + Charlie2 DNA MER1_type 33 279 -2503 424 316 83 18 chr10 4990823 4991101 -140598187 + MER92B LTR ERV1 250 545 -91 297 127 38 13 chr10 4991265 4991344 -140597944 + (TCTA)n Simple_repeat Simple_repeat 1 81 0 315 232 71 19 chr10 4991536 4991691 -140597597 + Charlie2 DNA MER1_type 2696 2858 -4 242 323 31 31 chr10 4992133 4992229 -140597059 - MIR SINE MIR -93 115 20 994 257 73 16 chr10 4992677 4993058 -140596230 + L1ME2 LINE L1 5696 6098 -66 705 261 39 32 chr10 4993678 4993958 -140595330 + L1MC4 LINE L1 6762 7043 -999 284 261 63 56 chr10 4993988 4994130 -140595158 + L1MC5 LINE L1 7322 7464 -497 586 258 112 29 chr10 4994139 4994557 -140594731 + L2 LINE L2 2009 2461 -853 378 319 127 0 chr10 4995343 4995500 -140593788 - MIR3 SINE MIR -6 202 26 236 261 11 0 chr10 4995779 4995871 -140593417 + (TG)n Simple_repeat Simple_repeat 1 93 0 192 270 81 27 chr10 4997319 4997393 -140591895 - MIR SINE MIR -75 187 110 365 148 0 148 chr10 4998359 4998447 -140590841 + MER61E LTR ERV1 37 111 -458 * 382 198 0 25 chr10 4998427 4998508 -140590780 + LTR25 LTR ERV1 215 293 -501 2305 177 50 64 chr10 4998627 4999199 -140590089 + LTR25 LTR ERV1 251 569 0 3721 198 50 28 chr10 4999202 5000016 -140589272 + LTR25-int LTR ERV1 3 834 -6162 5483 2 0 0 chr10 5000116 5000708 -140588580 + L1HS LINE L1 5564 6155 0 1844 137 23 31 chr10 5000713 5001270 -140588018 + LTR10E LTR ERV1 8 612 -21 241 189 126 31 chr10 5001886 5002013 -140587275 + LTR33A LTR ERVL 324 462 -61 350 315 124 35 chr10 5002458 5002772 -140586516 - L2 LINE L2 -1 3312 2971 1569 188 23 31 chr10 5003054 5003182 -140586106 + MLT1A1 LTR MaLR 12 140 -225 2427 154 56 5 chr10 5003182 5003591 -140585697 - MSTB1 LTR MaLR -2 430 1 1569 188 23 31 chr10 5003591 5003814 -140585474 + MLT1A1 LTR MaLR 140 360 -5 378 183 97 11 chr10 5004013 5004106 -140585182 - MSTB2 LTR MaLR 0 457 357 22142 58 8 5 chr10 5004106 5007616 -140581672 + L1PA5 LINE L1 2628 6149 -5 837 252 59 50 chr10 5007744 5008085 -140581203 - L1MC4 LINE L1 -201 7841 7498 2623 162 41 9 chr10 5008571 5009010 -140580278 + MER6 DNA MER2_type 2 454 -411 759 253 113 76 chr10 5009900 5010323 -140578965 - LTR32 LTR ERVL -27 444 6 281 145 194 0 chr10 5010297 5010359 -140578929 - LTR32 LTR ERVL -383 88 15 * 297 136 0 0 chr10 5010357 5010401 -140578887 - LTR32 LTR ERVL -413 58 15 264 177 194 0 chr10 5010381 5010443 -140578845 - LTR32 LTR ERVL -383 88 15 * 346 104 224 0 chr10 5010424 5010491 -140578797 - LTR32 LTR ERVL -384 87 6 287 145 194 0 chr10 5010465 5010527 -140578761 - LTR32 LTR ERVL -383 88 15 * 290 159 0 0 chr10 5010525 5010569 -140578719 - LTR32 LTR ERVL -413 58 15 258 242 100 23 chr10 5011201 5011298 -140577990 - MER5B DNA MER1_type -4 174 75 2305 76 0 3 chr10 5011298 5011589 -140577699 - AluY SINE Alu -21 290 1 258 242 100 23 chr10 5011589 5011608 -140577680 - MER5B DNA MER1_type -103 75 59 2956 163 64 12 chr10 5011626 5012192 -140577096 + LTR49 LTR ERV1 1 595 0 1147 209 32 66 chr10 5012526 5012904 -140576384 + MER31A LTR ERV1 1 365 -120 6436 84 12 12 chr10 5012904 5013810 -140575478 - PABL_A-int LTR ERV1 -401 4614 3709 521 253 70 19 chr10 5013910 5014068 -140575220 + Tigger1 DNA MER2_type 2252 2417 -1 956 225 16 0 chr10 5014471 5014662 -140574626 + MER7A DNA MER2_type 12 203 -143 44945 40 1 4 chr10 5014690 5020862 -140568426 - L1PA3 LINE L1 -2 6153 2 861 81 0 65 chr10 5020977 5021101 -140568187 + AluSc SINE Alu 54 169 -140 2084 113 28 0 chr10 5021123 5021407 -140567881 - AluSx SINE Alu -20 292 1 465 275 51 29 chr10 5021414 5021552 -140567736 + MER7A DNA MER2_type 197 337 0 765 242 36 12 chr10 5021552 5021800 -140567488 - L1M4c LINE L1 -4006 2378 2125 2020 145 0 20 chr10 5022116 5022419 -140566869 - AluSx SINE Alu -6 306 10 2339 91 0 0 chr10 5022540 5022838 -140566450 - AluY SINE Alu -13 298 1 25 51 0 0 chr10 5022913 5022952 -140566336 + AT_rich Low_complexity Low_complexity 1 39 0 643 338 61 7 chr10 5023089 5023385 -140565903 - L2 LINE L2 -890 2424 2113 1916 158 0 3 chr10 5025767 5026064 -140563224 - AluSx SINE Alu -16 296 1 1794 227 65 8 chr10 5027178 5027579 -140561709 + MSTB LTR MaLR 1 424 -2 2127 225 20 4 chr10 5027581 5028039 -140561249 + MSTB-int LTR MaLR 1 465 -1186 315 256 39 45 chr10 5028594 5028750 -140560538 + L1M4 LINE L1 5115 5269 -877 284 263 103 39 chr10 5028765 5028921 -140560367 + MLT1H LTR MaLR 357 522 -27 186 229 12 108 chr10 5029098 5029181 -140560107 - MIR3 SINE MIR -39 169 95 358 234 84 0 chr10 5029664 5029771 -140559517 + MER5A DNA MER1_type 1 116 -73 409 299 72 14 chr10 5030200 5030421 -140558867 + L1MC4 LINE L1 6832 7065 -977 2187 128 51 26 chr10 5030477 5030828 -140558460 + THE1B LTR MaLR 3 362 -2 9293 164 34 37 chr10 5030830 5031657 -140557631 + THE1B-int LTR MaLR 15 836 -744 2357 86 0 20 chr10 5031657 5031960 -140557328 + AluSg SINE Alu 1 297 -13 9293 164 34 37 chr10 5031960 5032701 -140556587 + THE1B-int LTR MaLR 836 1578 -2 1985 130 103 30 chr10 5032703 5033042 -140556246 + THE1B LTR MaLR 1 364 0 23 0 0 0 chr10 5033148 5033171 -140556117 + AT_rich Low_complexity Low_complexity 1 23 0 386 242 114 72 chr10 5033269 5033533 -140555755 + L1MC4 LINE L1 7210 7484 -558 353 171 0 26 chr10 5033837 5033913 -140555375 + L1MC5 LINE L1 7603 7676 -285 252 304 22 29 chr10 5036519 5036657 -140552631 + L2 LINE L2 1790 1926 -1388 1932 256 26 37 chr10 5038799 5039451 -140549837 + L1PB2 LINE L1 3 647 -6216 884 194 16 0 chr10 5039462 5039584 -140549704 + L1PB2 LINE L1 4275 4402 -2460 360 0 0 0 chr10 5039584 5039624 -140549664 + (CA)n Simple_repeat Simple_repeat 2 41 0 884 194 16 0 chr10 5039624 5039687 -140549601 + L1PB2 LINE L1 4402 4463 -2399 405 0 0 0 chr10 5039990 5040035 -140549253 + (CA)n Simple_repeat Simple_repeat 2 46 0 6354 181 79 10 chr10 5040035 5041947 -140547341 + L1PB2 LINE L1 4404 6453 -414 1919 179 22 11 chr10 5042050 5042414 -140546874 + L1PB2 LINE L1 6498 6865 -2 4185 130 56 73 chr10 5042899 5043697 -140545591 - LTR1 LTR ERV1 0 785 1 238 352 34 0 chr10 5043810 5043898 -140545390 - MER81 DNA DNA 0 114 24 258 303 0 0 chr10 5043920 5043986 -140545302 - MER68 LTR ERV1 -6 556 491 1332 179 21 69 chr10 5044000 5044291 -140544997 - AluJb SINE Alu -27 285 9 1292 289 61 7 chr10 5044318 5044743 -140544545 - MER68 LTR ERV1 -114 448 1 1224 239 108 49 chr10 5045359 5045887 -140543401 + MER31-int LTR ERV1 1914 2472 -2464 2339 86 0 13 chr10 5045929 5046231 -140543057 - AluSp SINE Alu -15 298 1 222 312 136 0 chr10 5047149 5047303 -140541985 + L2 LINE L2 1783 1957 -1357 387 277 84 47 chr10 5050051 5050333 -140538955 - MER68 LTR ERV1 -6 599 238 489 237 0 23 chr10 5052701 5052832 -140536456 + U8 snRNA snRNA 5 132 -4 2106 280 33 29 chr10 5053363 5054375 -140534913 + L1M4c LINE L1 806 1821 -4563 655 243 83 25 chr10 5054391 5054786 -140534502 + L1M4c LINE L1 1932 2349 -4035 228 296 0 0 chr10 5054789 5054843 -140534445 - Tigger3(Golem) DNA MER2_type -1 3028 2975 * 606 223 0 0 chr10 5054839 5054978 -140534310 + MLT1D LTR MaLR 364 502 -3 1103 286 106 24 chr10 5054980 5055441 -140533847 + L2 LINE L2 1589 2087 -1227 305 317 10 0 chr10 5055501 5055602 -140533686 + L1M4c LINE L1 955 1056 -5793 713 326 25 0 chr10 5055958 5056200 -140533088 + L1PA15-16 LINE L1 1263 1510 -5339 3214 255 52 33 chr10 5056305 5057855 -140531433 + L1PA15-16 LINE L1 2373 3999 -2850 2020 127 30 10 chr10 5057855 5058155 -140531133 + AluSx SINE Alu 1 306 -6 3214 255 52 33 chr10 5058155 5058251 -140531037 + L1PA15-16 LINE L1 3999 4092 -2757 * 26476 42 5 1 chr10 5058232 5061758 -140527530 + L1P2 LINE L1 1921 5460 -695 204 290 153 17 chr10 5062036 5062212 -140527076 + L2 LINE L2 1798 1997 -1317 966 303 94 16 chr10 5064957 5065469 -140523819 - MER68 LTR ERV1 -10 552 1 23 33 0 0 chr10 5067361 5067391 -140521897 + AT_rich Low_complexity Low_complexity 1 30 0 416 258 38 30 chr10 5067748 5067880 -140521408 + U8 snRNA snRNA 1 133 -3 225 265 68 34 chr10 5068206 5068323 -140520965 + L1M4c LINE L1 1016 1136 -5714 2194 246 40 50 chr10 5068403 5068440 -140520848 + L1M4c LINE L1 1243 1279 -5571 2025 123 3 10 chr10 5068440 5068733 -140520555 + AluSc SINE Alu 1 291 -18 2194 246 40 50 chr10 5068733 5069395 -140519893 + L1M4c LINE L1 1279 1946 -4904 1675 147 30 4 chr10 5069395 5069660 -140519628 + AluSx SINE Alu 36 307 -5 2194 246 40 50 chr10 5069660 5069826 -140519462 + L1M4c LINE L1 1946 2112 -4738 2048 122 17 0 chr10 5069826 5070113 -140519175 - AluSc SINE Alu -17 292 1 2194 246 40 50 chr10 5070113 5070300 -140518988 + L1M4c LINE L1 2112 2286 -4564 535 264 39 10 chr10 5070391 5070599 -140518689 + L1M4c LINE L1 2494 2707 -4143 2671 264 10 8 chr10 5070676 5071398 -140517890 - MST-int LTR MaLR -19 1632 910 223 208 0 38 chr10 5071643 5071696 -140517592 + GA-rich Low_complexity Low_complexity 2 52 0 3648 181 74 15 chr10 5072600 5073380 -140515908 + LTR1B LTR ERV1 1 826 0 524 258 19 80 chr10 5073874 5074235 -140515053 + L1 LINE L1 4982 5320 -826 386 165 13 25 chr10 5074249 5074328 -140514960 + L1PA15-16 LINE L1 1202 1279 -5570 * 666 203 120 0 chr10 5074326 5074484 -140514804 + L1PB4 LINE L1 5980 6156 0 196 290 16 16 chr10 5074493 5074555 -140514733 + MER5B DNA MER1_type 49 110 -68 1500 253 26 17 chr10 5075355 5075821 -140513467 + MLT1D LTR MaLR 36 505 0 711 302 60 0 chr10 5075828 5076093 -140513195 + L2 LINE L2 1598 1878 -1436 883 144 7 7 chr10 5076094 5076247 -140513041 + L1PA13 LINE L1 6004 6156 -7 22 88 0 0 chr10 5076778 5076835 -140512453 + AT_rich Low_complexity Low_complexity 1 57 0 378 192 48 29 chr10 5076850 5076954 -140512334 + LTR49-int LTR ERV1 1015 1120 -5211 1888 214 28 37 chr10 5077230 5077773 -140511515 - L1MB3 LINE L1 0 6183 5646 313 153 17 0 chr10 5077773 5077832 -140511456 - MER4A LTR ERV1 0 664 605 3557 286 15 1 chr10 5077837 5078755 -140510533 - PABL_B-int LTR ERV1 -2438 4684 3754 384 252 15 22 chr10 5078758 5078893 -140510395 + MER67C LTR ERV1 561 694 -16 1927 130 132 43 chr10 5079291 5079684 -140509604 - MSTA LTR MaLR 0 428 1 6314 182 7 12 chr10 5079685 5080854 -140508434 - MSTA-int LTR MaLR -1 1579 417 254 220 0 0 chr10 5080891 5080950 -140508338 - MSTA-int LTR MaLR -1159 421 363 291 176 14 68 chr10 5082685 5082749 -140506539 + U8 snRNA snRNA 1 62 -74 1966 139 36 0 chr10 5082749 5083050 -140506238 + AluSx SINE Alu 1 312 0 510 144 0 0 chr10 5083076 5083166 -140506122 - L1P5 LINE L1 -647 5509 5420 285 258 27 5 chr10 5083516 5083640 -140505648 + L1M4c LINE L1 650 925 -5721 344 188 36 80 chr10 5083691 5083803 -140505485 + L1M4c LINE L1 1035 1141 -5505 1417 252 6 6 chr10 5083875 5084240 -140505048 - L1PA16 LINE L1 -18 6148 5784 7918 248 43 7 chr10 5084288 5086687 -140502601 - L1PA16 LINE L1 -622 5534 2999 2183 108 0 7 chr10 5086687 5086984 -140502304 - AluSg1 SINE Alu -14 295 1 7918 248 43 7 chr10 5086984 5087565 -140501723 - L1PA16 LINE L1 -3157 2999 2440 226 277 0 0 chr10 5087568 5087651 -140501637 - L1 LINE L1 -3759 2387 2305 29 28 0 0 chr10 5087651 5087687 -140501601 + AT_rich Low_complexity Low_complexity 1 36 0 6172 190 14 4 chr10 5087687 5088993 -140500295 - L1P LINE L1 -1032 5114 3795 380 276 37 29 chr10 5089062 5089305 -140499983 + L1M4c LINE L1 2641 2885 -3759 853 179 68 8 chr10 5089320 5089554 -140499734 - Tigger1 DNA MER2_type 0 2418 2171 1262 295 124 32 chr10 5089557 5090519 -140498769 + L2 LINE L2 2246 3308 -5 751 290 70 35 chr10 5090717 5091180 -140498108 - MLT1E LTR MaLR -97 496 17 353 350 104 30 chr10 5091616 5091953 -140497335 + L3 LINE CR1 595 956 -621 23 68 0 0 chr10 5092088 5092132 -140497156 + AT_rich Low_complexity Low_complexity 1 44 0 2377 87 0 0 chr10 5092201 5092499 -140496789 - AluY SINE Alu -13 298 1 231 228 158 40 chr10 5093906 5094007 -140495281 - MIR SINE MIR 0 262 150 2272 190 69 15 chr10 5094242 5094777 -140494511 - LTR25 LTR ERV1 -4 788 244 506 74 0 25 chr10 5094799 5094880 -140494408 - LTR25 LTR ERV1 -501 293 215 286 187 0 165 chr10 5094860 5094951 -140494337 - MER61E LTR ERV1 -458 111 36 * 1922 199 10 20 chr10 5094975 5095477 -140493811 - MER61E-int LTR ERV1 -5 6991 6495 6710 204 36 34 chr10 5095590 5095788 -140493500 - MER61E-int LTR ERV1 -967 6451 6255 2080 125 7 3 chr10 5095788 5096083 -140493205 - AluSx SINE Alu -16 296 1 6710 204 36 34 chr10 5096083 5097571 -140491717 - MER61E-int LTR ERV1 -1163 6255 4763 25821 43 3 3 chr10 5097571 5101712 -140487576 + L1P LINE L1 1 4131 -2015 347 319 37 12 chr10 5102404 5102567 -140486721 + MER92B LTR ERV1 242 408 -228 225 0 48 48 chr10 5102653 5102695 -140486593 + (CAAAA)n Simple_repeat Simple_repeat 5 46 0 365 233 43 0 chr10 5102859 5102975 -140486313 + (TCTA)n Simple_repeat Simple_repeat 3 123 0 21 57 0 0 chr10 5103045 5103080 -140486208 + AT_rich Low_complexity Low_complexity 1 35 0 328 210 87 43 chr10 5103177 5103315 -140485973 + Charlie2 DNA MER1_type 2719 2862 0 271 323 0 83 chr10 5103751 5103884 -140485404 - MIR3 SINE MIR -84 124 3 1220 239 82 30 chr10 5104294 5104733 -140484555 + L1ME2 LINE L1 5690 6151 -13 650 234 33 85 chr10 5105295 5105590 -140483698 + L1MC4 LINE L1 6693 7021 -1006 437 249 69 42 chr10 5105608 5105797 -140483491 + L1MC5 LINE L1 7321 7514 -447 285 244 0 0 chr10 5105797 5105883 -140483405 + GA-rich Low_complexity Low_complexity 3 88 0 592 235 112 76 chr10 5105888 5105937 -140483351 + L1MC5 LINE L1 7472 7518 -443 1982 108 58 0 chr10 5105937 5106214 -140483074 + AluSg SINE Alu 1 293 -17 592 235 112 76 chr10 5106214 5106547 -140482741 + L1MC5 LINE L1 7518 7868 -93 6510 149 35 15 chr10 5106565 5107680 -140481608 + HSMAR2 DNA Mariner 2 1138 -164 393 209 29 0 chr10 5107842 5107947 -140481341 + HSMAR2 DNA Mariner 1192 1299 -3 28 71 0 0 chr10 5107961 5108017 -140481271 + AT_rich Low_complexity Low_complexity 1 56 0 276 333 26 0 chr10 5108284 5108398 -140480890 + MLT1L LTR MaLR 173 289 -326 275 185 0 19 chr10 5108579 5108633 -140480655 + MLT1L LTR MaLR 555 607 -8 32 43 0 0 chr10 5108807 5108853 -140480435 + AT_rich Low_complexity Low_complexity 1 46 0 640 271 124 47 chr10 5109059 5109656 -140479632 + L2 LINE L2 1819 2461 -853 394 308 119 13 chr10 5110446 5110605 -140478683 - MIR3 SINE MIR -6 202 27 414 262 0 0 chr10 5110844 5110993 -140478295 + (TG)n Simple_repeat Simple_repeat 2 150 0 7556 43 12 0 chr10 5112489 5113742 -140475546 + L1PA4 LINE L1 4886 6150 -5 756 222 160 31 chr10 5113748 5113978 -140475310 + MER65-int LTR ERV1 2493 4559 -1704 * 4767 257 21 7 chr10 5113967 5115065 -140474223 + MER65-int LTR ERV1 1584 2696 -6223 1278 79 0 0 chr10 5115066 5115231 -140474057 - LTR19B LTR ERV1 -413 167 3 1322 164 9 0 chr10 5115234 5115448 -140473840 - HERVFH19I LTR ERV1 -1 7718 7503 * 11773 92 9 5 chr10 5115447 5117032 -140472256 - LTR19-int LTR ERV1 -337 5249 3658 13210 51 76 4 chr10 5117132 5118851 -140470437 - L1P LINE L1 -4302 1844 2 1935 195 46 2 chr10 5119000 5119394 -140469894 - MSTB LTR MaLR -15 411 1 372 245 21 21 chr10 5120081 5120175 -140469113 - L1ME1 LINE L1 -5 6161 6068 2583 216 35 24 chr10 5120211 5120836 -140468452 + LTR48B LTR ERV1 13 644 0 1747 257 43 19 chr10 5120836 5121366 -140467922 - L1ME1 LINE L1 -99 6067 5525 665 238 37 56 chr10 5121406 5121620 -140467668 - L1MDa LINE L1 -6244 296 87 217 351 40 35 chr10 5121897 5122099 -140467189 + L2 LINE L2 2971 3173 -140 7757 121 50 1 chr10 5122163 5123325 -140465963 - HSMAR1 DNA Mariner -56 1231 13 29379 116 32 63 chr10 5123325 5126206 -140463082 - L1PA7 LINE L1 -16 6138 3167 210 37 0 0 chr10 5126206 5126233 -140463055 + (TG)n Simple_repeat Simple_repeat 2 28 0 29379 116 32 63 chr10 5126233 5129699 -140459589 - L1PA7 LINE L1 -2987 3167 12 423 218 29 35 chr10 5130869 5131039 -140458249 - L1ME1 LINE L1 -872 5274 5106 256 200 0 0 chr10 5131053 5131103 -140458185 - MERVL-B3 LTR ERVL -5042 443 394 1080 209 50 56 chr10 5131141 5131499 -140457789 - MERVL-B3 LTR ERVL -5298 356 1 231 125 0 0 chr10 5131534 5131574 -140457714 + (TG)n Simple_repeat Simple_repeat 1 40 0 2064 233 27 33 chr10 5131574 5132085 -140457203 - MLT2B3 LTR ERVL -46 508 1 8968 174 48 23 chr10 5132123 5132661 -140456627 + Tigger1 DNA MER2_type 2 525 -1893 2262 92 7 0 chr10 5132661 5132943 -140456345 - AluSg SINE Alu -25 285 2 8968 174 48 23 chr10 5132943 5134202 -140455086 + Tigger1 DNA MER2_type 525 1845 -573 5405 37 0 6 chr10 5134335 5134959 -140454329 + L1PA4 LINE L1 5535 6154 -1 3481 240 11 33 chr10 5134959 5135894 -140453394 + L1 LINE L1 3386 4299 -1847 1033 292 58 18 chr10 5136849 5137243 -140452045 + LTR26 LTR ERV1 191 600 -3 1833 166 0 11 chr10 5137380 5137692 -140451596 - AluSx SINE Alu 0 309 1 802 202 71 158 chr10 5138093 5138738 -140450550 - LTR49 LTR ERV1 0 595 7 2983 133 11 77 chr10 5139470 5139587 -140449701 + MER75 DNA T2_type 1 124 -390 1842 131 0 66 chr10 5139587 5139892 -140449396 - AluSx SINE Alu -27 285 1 2983 133 11 77 chr10 5139892 5140323 -140448965 + MER75 DNA T2_type 124 513 -1 509 169 11 0 chr10 5141520 5141609 -140447679 - MSTD LTR MaLR 0 428 339 201 39 0 0 chr10 5141611 5141637 -140447651 + (GA)n Simple_repeat Simple_repeat 1 26 0 874 186 34 0 chr10 5141649 5141826 -140447462 - MSTD LTR MaLR -213 183 1 2280 105 3 0 chr10 5142147 5142441 -140446847 - AluSp SINE Alu -18 295 1 547 152 132 111 chr10 5142672 5142931 -140446357 - LTR49 LTR ERV1 -1 594 285 518 139 285 7 chr10 5142931 5143068 -140446220 - MER4C LTR ERV1 0 465 291 912 194 155 52 chr10 5143124 5143434 -140445854 - MER4A LTR ERV1 -322 342 1 1398 184 23 0 chr10 5143435 5143694 -140445594 - LTR49 LTR ERV1 -308 287 23 1830 151 3 22 chr10 5143694 5144046 -140445242 - MER4A LTR ERV1 0 664 261 613 121 10 20 chr10 5144046 5144145 -140445143 - MER4A LTR ERV1 -566 98 1 425 224 26 26 chr10 5144172 5144288 -140445000 - MER31B LTR ERV1 -106 360 245 332 180 60 20 chr10 5144671 5144771 -140444517 - MER67C LTR ERV1 0 710 607 1531 143 0 0 chr10 5144772 5144995 -140444293 + AluSg SINE Alu 1 223 -87 360 62 0 0 chr10 5145098 5145146 -140444142 + pTR5 LTR ERV1 345 392 -2046 2213 124 3 0 chr10 5145729 5146036 -140443252 + AluSq SINE Alu 1 308 -5 387 308 0 9 chr10 5147289 5147396 -140441892 - MER68 LTR ERV1 -110 452 347 359 264 64 9 chr10 5149152 5149262 -140440026 + U8 snRNA snRNA 21 136 0 4109 162 70 69 chr10 5149483 5150436 -140438852 + LTR13 LTR ERVK 1 954 0 74202 6 2 3 chr10 5150436 5158562 -140430726 + HERVK13 LTR ERVK 1 8116 0 844 215 52 40 chr10 5158562 5158813 -140430475 + LTR13 LTR ERVK 1 254 -753 13461 55 19 3 chr10 5158818 5160467 -140428821 - HERVK14 LTR ERVK -3083 2862 1188 1768 215 80 67 chr10 5160594 5161180 -140428108 - MER67C LTR ERV1 -89 621 28 2299 221 32 15 chr10 5161514 5162047 -140427241 - MER67A LTR ERV1 -1 542 1 679 335 0 0 chr10 5162245 5162442 -140426846 + MSTD LTR MaLR 200 396 0 1103 256 19 4 chr10 5162639 5162905 -140426383 - MLT1A1 LTR MaLR 0 365 96 2693 130 19 0 chr10 5162905 5163275 -140426013 + MER51B LTR ERV1 1 377 0 1976 166 92 26 chr10 5163275 5163654 -140425634 + MER51B-int LTR ERV1 1 404 -7412 2059 151 3 0 chr10 5163660 5163959 -140425329 - AluSq SINE Alu -13 300 1 879 108 7 7 chr10 5163959 5164107 -140425181 + LTR49-int LTR ERV1 1993 2140 -5676 2049 134 64 0 chr10 5164115 5164443 -140424845 + LTR49-int LTR ERV1 2964 3312 -4504 1498 129 19 23 chr10 5164439 5164703 -140424585 + LTR49-int LTR ERV1 2832 3094 -2852 * 877 143 27 0 chr10 5164706 5164853 -140424435 - GSAT Satellite centromeric -27 190 40 856 172 93 54 chr10 5164855 5165059 -140424229 + LTR49-int LTR ERV1 1762 1973 -3244 * 8231 184 102 69 chr10 5165041 5166492 -140422796 + LTR49-int LTR ERV1 4954 6356 -1460 234 0 0 0 chr10 5166492 5166518 -140422770 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 8231 184 102 69 chr10 5166518 5167720 -140421568 + LTR49-int LTR ERV1 6356 7816 0 838 155 30 24 chr10 5167862 5168030 -140421258 - MSTA-int LTR MaLR -1482 169 1 2104 152 129 28 chr10 5168030 5168418 -140420870 - MSTA LTR MaLR 0 428 2 420 214 19 10 chr10 5168454 5168557 -140420731 + MER31B LTR ERV1 257 360 -106 1954 184 11 3 chr10 5168560 5168908 -140420380 + LTR49 LTR ERV1 3 353 -242 1168 228 35 27 chr10 5168914 5169173 -140420115 - AluJo SINE Alu -49 263 3 744 199 89 171 chr10 5170938 5171586 -140417702 + LTR49 LTR ERV1 1 595 0 1120 280 79 17 chr10 5172089 5172557 -140416731 - LTR26 LTR ERV1 -3 600 104 1008 106 0 35 chr10 5173030 5173171 -140416117 - AluSq/x SINE Alu -175 137 2 682 258 19 24 chr10 5173370 5173604 -140415684 - MLT1E LTR MaLR -98 495 252 189 74 0 0 chr10 5174914 5174941 -140414347 + (TTA)n Simple_repeat Simple_repeat 1 27 0 298 157 20 0 chr10 5175341 5175392 -140413896 - LTR29 LTR ERV1 0 622 571 336 270 0 0 chr10 5176361 5176509 -140412779 + (TG)n Simple_repeat Simple_repeat 1 148 0 2243 210 35 8 chr10 5176541 5177026 -140412262 + L1P LINE L1 4410 4907 -1239 552 103 103 0 chr10 5177034 5177131 -140412157 + L1PA15 LINE L1 6053 6159 -6 1076 160 52 16 chr10 5177168 5177362 -140411926 - MER50 LTR ERV1 -533 201 1 1844 162 10 0 chr10 5177363 5177660 -140411628 - MER50-int LTR ERV1 -24 7181 6882 * 7452 147 14 14 chr10 5177659 5178313 -140410975 - MER41-int LTR ERV1 -463 5483 4827 216 0 0 0 chr10 5178313 5178337 -140410951 + (CAA)n Simple_repeat Simple_repeat 2 25 0 7452 147 14 14 chr10 5178337 5178955 -140410333 - MER41-int LTR ERV1 -1118 4828 4211 3055 174 78 41 chr10 5179057 5179740 -140409548 - pTR5 LTR ERV1 -990 1448 741 570 325 96 17 chr10 5180855 5181147 -140408141 + L2 LINE L2 2110 2424 -890 631 264 66 46 chr10 5181519 5182046 -140407242 + L1M4c LINE L1 1713 2342 -4042 1479 170 120 0 chr10 5182046 5182322 -140406966 + AluSx SINE Alu 1 309 -3 631 264 66 46 chr10 5182322 5182359 -140406929 + L1M4c LINE L1 2342 2377 -4007 297 276 11 11 chr10 5182361 5182448 -140406840 - Tigger3(Golem) DNA MER2_type 0 3038 2952 1820 196 15 15 chr10 5182451 5182843 -140406445 - Tigger1 DNA MER2_type -467 1951 1560 3201 99 47 0 chr10 5182843 5182879 -140406409 - MLT2A1 LTR ERVL 0 444 411 195 69 0 0 chr10 5182879 5182908 -140406380 + (TA)n Simple_repeat Simple_repeat 1 29 0 3201 99 47 0 chr10 5182908 5183295 -140405993 - MLT2A1 LTR ERVL -33 411 1 6984 93 43 6 chr10 5183295 5184279 -140405009 - HERVL-A1 LTR ERVL 0 5654 4635 2058 70 11 22 chr10 5184272 5184543 -140404745 - HERVL-A1 LTR ERVL -1742 3912 3645 * 2128 131 25 0 chr10 5184545 5184865 -140404423 + MER75 DNA T2_type 187 514 0 2064 188 53 14 chr10 5185265 5185681 -140403607 - MSTB1 LTR MaLR 0 432 1 1309 232 27 55 chr10 5185681 5186048 -140403240 - MSTB1-int LTR MaLR 0 1651 1295 2152 150 53 3 chr10 5186051 5186411 -140402877 - MER39B LTR ERV1 -270 383 6 603 181 9 0 chr10 5186414 5186519 -140402769 + LTR49 LTR ERV1 490 595 0 639 291 9 36 chr10 5186520 5186740 -140402548 - LTR40a LTR ERVL -305 214 1 255 317 84 42 chr10 5186780 5186922 -140402366 + L2 LINE L2 3166 3313 0 285 270 93 28 chr10 5187016 5187264 -140402024 + L1ME4a LINE L1 5808 6071 -50 3106 108 82 4 chr10 5187643 5188117 -140401171 + MER9 LTR ERVK 1 511 0 333 208 73 0 chr10 5189306 5189402 -140399886 + ORSL DNA AcHobo 1 103 -172 240 281 141 20 chr10 5189927 5190126 -140399162 + Charlie2 DNA MER1_type 31 253 -2529 287 284 90 19 chr10 5190354 5190509 -140398779 - MER92B LTR ERV1 -97 539 374 185 379 131 0 chr10 5190664 5190817 -140398471 - MIR3 SINE MIR -33 175 3 421 198 69 10 chr10 5191245 5191346 -140397942 + MER5A DNA MER1_type 8 114 -75 404 335 93 4 chr10 5191766 5192023 -140397265 + L1MC4 LINE L1 6783 7062 -980 22 80 0 0 chr10 5192277 5192327 -140396961 + AT_rich Low_complexity Low_complexity 1 50 0 411 241 35 41 chr10 5192434 5192579 -140396709 + L1MC4 LINE L1 7277 7420 -622 12813 213 44 16 chr10 5193088 5195146 -140394142 + L1PB2 LINE L1 2 2000 -4208 2133 114 9 19 chr10 5195146 5195461 -140393827 + AluSx SINE Alu 1 312 0 12813 213 44 16 chr10 5195461 5199882 -140389406 + L1PB2 LINE L1 2000 6045 -163 874 207 38 42 chr10 5200023 5200260 -140389028 + L1PB2 LINE L1 5916 6151 0 1314 199 17 52 chr10 5201019 5201306 -140387982 - AluJb SINE Alu -27 285 9 911 298 40 6 chr10 5201333 5201739 -140387549 - MER68 LTR ERV1 -114 448 1 544 33 55 0 chr10 5203430 5203521 -140385767 + (TCTA)n Simple_repeat Simple_repeat 2 97 0 288 237 66 13 chr10 5204136 5204187 -140385101 + U8 snRNA snRNA 15 73 -63 1561 195 4 0 chr10 5204187 5204444 -140384844 + AluSq SINE Alu 1 258 -55 288 237 66 13 chr10 5204444 5204468 -140384820 + U8 snRNA snRNA 73 94 -42 465 167 1 0 chr10 5204472 5204565 -140384723 - L1P5 LINE L1 -647 5509 5416 457 285 36 28 chr10 5204572 5204821 -140384467 + L1M4 LINE L1 2142 2392 -3754 1004 236 38 4 chr10 5204831 5205094 -140384194 - Tigger1 DNA MER2_type 0 2418 2147 436 141 0 0 chr10 5205109 5205173 -140384115 + L1P LINE L1 11 74 -6072 * 3134 55 57 2 chr10 5205172 5205591 -140383697 + L1PA6 LINE L1 3640 4081 -2065 5669 98 108 33 chr10 5205591 5206679 -140382609 - MER11A LTR ERVK 0 1266 1 10244 48 12 0 chr10 5206679 5208581 -140380707 + L1PA6 LINE L1 4076 6003 -151 3352 246 24 12 chr10 5208689 5209693 -140379595 - L1PBb LINE L1 -4144 2705 1598 846 264 129 27 chr10 5209723 5210018 -140379270 - L1PBb LINE L1 -5288 1561 1237 552 28 42 0 chr10 5210018 5210089 -140379199 - pTR5 LTR ERV1 -2286 152 79 351 172 63 81 chr10 5210089 5210200 -140379088 - LTR30 LTR ERV1 -70 724 544 4508 131 77 71 chr10 5210200 5211239 -140378049 - pTR5 LTR ERV1 -413 2025 743 26 0 0 0 chr10 5211539 5211565 -140377723 + AT_rich Low_complexity Low_complexity 1 26 0 36 23 0 0 chr10 5212275 5212318 -140376970 + AT_rich Low_complexity Low_complexity 1 43 0 1254 284 3 0 chr10 5212607 5212913 -140376375 + MST-int LTR MaLR 907 1213 -438 485 260 90 57 chr10 5212913 5213267 -140376021 - L1M4c LINE L1 -5213 1171 806 2886 61 0 0 chr10 5213285 5213629 -140375659 + LTR14A LTR ERVK 1 344 0 9019 77 4 2 chr10 5213629 5214771 -140374517 + HERVK14 LTR ERVK 1 1145 -4800 9785 187 46 30 chr10 5214874 5216933 -140372355 - Tigger1 DNA MER2_type -323 2095 4 1250 268 20 49 chr10 5216973 5217539 -140371749 + MLT2B3 LTR ERVL 1 504 -50 284 151 50 8 chr10 5217596 5217715 -140371573 + (TA)n Simple_repeat Simple_repeat 2 125 0 680 294 48 22 chr10 5217753 5218022 -140371266 + HERVL-B3 LTR ERVL 1 276 -5378 9643 30 4 0 chr10 5218024 5219147 -140370141 - L1P LINE L1 -1187 4959 3833 3099 24 0 3 chr10 5219145 5219521 -140369767 + L1P LINE L1 4984 5358 -788 * 7985 102 44 24 chr10 5219621 5220900 -140368388 - MER4-int LTR ERV1 -1457 5141 3837 342 286 122 7 chr10 5221274 5221334 -140367954 - L1ME4a LINE L1 -8 6113 6061 2690 156 7 23 chr10 5221334 5221770 -140367518 - LTR3 LTR ERVK 0 429 1 342 286 122 7 chr10 5221770 5221856 -140367432 - L1ME4a LINE L1 -60 6061 5950 399 88 118 0 chr10 5221887 5221955 -140367333 - L1PA15 LINE L1 -6 6159 6084 732 134 25 17 chr10 5221955 5222056 -140367232 + L1PA15 LINE L1 6044 6163 -2 1754 243 31 40 chr10 5222073 5222633 -140366655 + L1M4c LINE L1 1338 1901 -4481 2199 114 0 7 chr10 5222633 5222931 -140366357 + AluY SINE Alu 1 296 -15 1754 243 31 40 chr10 5222931 5223321 -140365967 + L1M4c LINE L1 1901 2375 -4007 1468 209 74 15 chr10 5223321 5223646 -140365642 - MER7A DNA MER2_type -1 345 4 1754 243 31 40 chr10 5223646 5223909 -140365379 + L1M4c LINE L1 2375 2639 -3743 1833 203 63 5 chr10 5223911 5224252 -140365036 - Tigger1 DNA MER2_type 0 2418 2051 216 0 0 0 chr10 5224252 5224276 -140365012 + (TAAAA)n Simple_repeat Simple_repeat 1 24 0 1833 203 63 5 chr10 5224276 5224313 -140364975 - Tigger1 DNA MER2_type -367 2051 2018 324 0 0 0 chr10 5224324 5224360 -140364928 + (CA)n Simple_repeat Simple_repeat 2 37 0 267 164 0 36 chr10 5224365 5224399 -140364889 + Ricksha DNA DNA 872 903 -2343 1658 232 95 13 chr10 5224399 5224851 -140364437 + ERVL LTR ERVL 2 490 -5274 490 209 39 39 chr10 5224853 5225006 -140364282 + L1M4 LINE L1 5099 5251 -895 920 185 40 0 chr10 5225488 5225661 -140363627 - AluJo SINE Alu -48 264 85 190 316 158 0 chr10 5226111 5226225 -140363063 - L3 LINE CR1 -85 1492 1361 230 247 124 22 chr10 5227091 5227180 -140362108 - MIR SINE MIR -77 185 88 511 178 22 0 chr10 5228555 5228645 -140360643 + MLT1D LTR MaLR 1 92 -413 765 206 75 45 chr10 5229394 5229661 -140359627 + ORSL DNA AcHobo 1 275 0 2396 94 0 0 chr10 5229710 5230009 -140359279 + AluSg SINE Alu 1 299 -11 263 27 0 27 chr10 5230303 5230340 -140358948 + (CA)n Simple_repeat Simple_repeat 1 36 0 461 171 0 0 chr10 5230345 5230415 -140358873 - MER8 DNA MER2_type 0 239 170 * 2077 124 14 40 chr10 5230404 5230758 -140358530 + Tigger2 DNA MER2_type 2273 2617 -101 22 0 0 0 chr10 5231674 5231696 -140357592 + AT_rich Low_complexity Low_complexity 1 22 0 193 268 18 0 chr10 5231709 5231765 -140357523 + MIR SINE MIR 154 210 -52 6708 93 13 3 chr10 5232313 5233296 -140355992 + L1PA12 LINE L1 5174 6168 0 1997 37 0 12 chr10 5233590 5233831 -140355457 - AluY SINE Alu 0 311 74 299 330 103 29 chr10 5234101 5234413 -140354875 - L3 LINE CR1 -614 963 629 1878 220 20 18 chr10 5235092 5235487 -140353801 + MSTD LTR MaLR 1 396 0 1481 211 14 31 chr10 5235687 5235913 -140353375 - MLT1A1 LTR MaLR -5 360 141 2431 163 48 5 chr10 5235913 5236325 -140352963 + MSTB1 LTR MaLR 1 430 -2 1481 211 14 31 chr10 5236325 5236453 -140352835 - MLT1A1 LTR MaLR -224 141 12 372 290 138 41 chr10 5236758 5237048 -140352240 + L2 LINE L2 2995 3312 -1 2414 35 0 18 chr10 5238228 5238541 -140350747 - AluY SINE Alu 0 308 1 1985 189 35 10 chr10 5238695 5239096 -140350192 - MSTB LTR MaLR -15 411 1 1433 109 104 0 chr10 5239577 5239798 -140349490 + L1M2 LINE L1 5562 5805 -495 367 226 21 0 chr10 5239786 5239879 -140349409 - L1 LINE L1 -1762 4384 4290 * 328 280 200 0 chr10 5239938 5240063 -140349225 + MLT1I LTR MaLR 249 398 -11 735 186 87 6 chr10 5240774 5240935 -140348353 + MER104 DNA Tc2 1 174 -6 542 167 83 19 chr10 5240961 5241069 -140348219 + MLT1C LTR MaLR 350 464 -3 516 271 0 0 chr10 5241906 5242076 -140347212 + (CA)n Simple_repeat Simple_repeat 2 171 0 2349 81 10 0 chr10 5242088 5242384 -140346904 - AluSq SINE Alu -14 299 1 2285 185 19 56 chr10 5242386 5242921 -140346367 + MLT2B1 LTR ERVL 6 520 0 2439 55 0 7 chr10 5243809 5244137 -140345151 - AluY SINE Alu 0 311 1 1970 147 0 10 chr10 5244151 5244443 -140344845 - AluJo SINE Alu -23 289 1 744 241 0 0 chr10 5246172 5246305 -140342983 - FLAM_A SINE Alu 0 133 1 1066 90 0 0 chr10 5246312 5246445 -140342843 - AluSg/x SINE Alu -16 294 162 587 165 0 0 chr10 5246447 5246532 -140342756 + AluJb SINE Alu 199 283 -29 1443 204 25 0 chr10 5247191 5247465 -140341823 + AluJb SINE Alu 1 281 -31 366 250 23 0 chr10 5248178 5248266 -140341022 + L1MC4 LINE L1 6614 6703 -1339 222 118 0 0 chr10 5248269 5248303 -140340985 + (TA)n Simple_repeat Simple_repeat 1 34 0 1786 146 3 14 chr10 5248303 5248590 -140340698 - AluSx SINE Alu -19 293 10 373 287 9 0 chr10 5249203 5249311 -140339977 + (CA)n Simple_repeat Simple_repeat 1 109 0 363 304 20 54 chr10 5250596 5250744 -140338544 - MIR3 SINE MIR -31 177 35 1964 125 6 19 chr10 5251190 5251503 -140337785 - THE1B LTR MaLR 0 364 56 214 324 0 14 chr10 5451533 5451604 -140137684 - L2 LINE L2 -679 2635 2566 1187 128 3 78 chr10 5451704 5452010 -140137278 - AluSx SINE Alu -19 293 11 380 250 59 52 chr10 5454296 5454432 -140134856 - MER63 DNA MER1_type -73 763 1 208 278 19 0 chr10 5454464 5454518 -140134770 - L2 LINE L2 -244 3069 3015 242 274 21 21 chr10 5454742 5454837 -140134451 + CT-rich Low_complexity Low_complexity 5 99 0 24 0 0 0 chr10 5455012 5455036 -140134252 + GC_rich Low_complexity Low_complexity 1 24 0 969 163 102 0 chr10 5455595 5455791 -140133497 + AluJo SINE Alu 87 302 -10 388 17 0 52 chr10 5456690 5456748 -140132540 - L1PA3 LINE L1 0 6155 6101 212 186 17 0 chr10 5457616 5457675 -140131613 + CT-rich Low_complexity Low_complexity 2 61 0 27 0 0 0 chr10 5457829 5457856 -140131432 + AT_rich Low_complexity Low_complexity 1 27 0 573 282 60 13 chr10 5457909 5458058 -140131230 - MIR SINE MIR -50 212 57 241 241 56 0 chr10 5458088 5458142 -140131146 - MIR SINE MIR -188 74 18 589 192 75 0 chr10 5459441 5459561 -140129727 + FLAM_A SINE Alu 8 136 -6 242 297 0 0 chr10 5459756 5459820 -140129468 - L2 LINE L2 -21 3292 3229 185 275 94 56 chr10 5459901 5460061 -140129227 + MIR SINE MIR 97 262 0 198 0 0 0 chr10 5460231 5460253 -140129035 + (T)n Simple_repeat Simple_repeat 1 22 0 31 0 0 0 chr10 5463118 5463149 -140126139 + AT_rich Low_complexity Low_complexity 1 31 0 189 0 0 0 chr10 5463547 5463568 -140125720 + (ATTG)n Simple_repeat Simple_repeat 3 23 0 1933 118 3 10 chr10 5464600 5464905 -140124383 - AluSc SINE Alu -1 308 6 1298 290 94 51 chr10 5465249 5466802 -140122486 - L1MEd LINE L1 -4641 1669 3 2680 226 79 50 chr10 5466992 5467712 -140121576 + L1M4b LINE L1 28 768 -6091 468 0 0 0 chr10 5469545 5469597 -140119691 + (CA)n Simple_repeat Simple_repeat 2 53 0 552 200 18 0 chr10 5470267 5470437 -140118851 + (TCCA)n Simple_repeat Simple_repeat 3 175 0 676 173 37 10 chr10 5470482 5470872 -140118416 + (TCCA)n Simple_repeat Simple_repeat 1 400 0 315 185 65 19 chr10 5470877 5470985 -140118303 + (CCCA)n Simple_repeat Simple_repeat 1 113 0 259 274 14 0 chr10 5471456 5471529 -140117759 + (CCCA)n Simple_repeat Simple_repeat 1 74 0 2031 121 7 0 chr10 5472511 5472808 -140116480 - AluSx SINE Alu -13 299 1 572 252 28 110 chr10 5476403 5476621 -140112667 - MIR SINE MIR -17 245 46 243 0 0 0 chr10 5476925 5476952 -140112336 + (A)n Simple_repeat Simple_repeat 1 27 0 2973 199 48 76 chr10 5477241 5478163 -140111125 + L1M4b LINE L1 743 1638 -5221 1756 238 70 9 chr10 5478525 5479085 -140110203 + L1M4b LINE L1 1616 2209 -4750 385 125 87 96 chr10 5479496 5479600 -140109688 - AluJ/FLAM SINE Alu -243 59 2 311 184 31 20 chr10 5482158 5482256 -140107032 + (TCCA)n Simple_repeat Simple_repeat 3 101 0 281 294 0 43 chr10 5482256 5482348 -140106940 - L2 LINE L2 0 3272 3185 811 177 0 0 chr10 5482645 5482775 -140106513 + FLAM_A SINE Alu 1 130 -3 561 306 44 20 chr10 5482882 5483125 -140106163 + MIR SINE MIR 3 248 -14 205 293 65 41 chr10 5483197 5483320 -140105968 - MIR SINE MIR -33 229 104 243 151 19 38 chr10 5483535 5483588 -140105700 + GA-rich Low_complexity Low_complexity 4 55 0 1518 147 66 7 chr10 5483963 5484235 -140105053 - AluJb SINE Alu -24 288 1 233 280 20 0 chr10 5484833 5484883 -140104405 + MER58A DNA MER1_type 1 51 -173 404 168 0 10 chr10 5484890 5484958 -140104330 - FLAM_A SINE Alu -11 122 66 343 140 0 18 chr10 5485115 5485172 -140104116 - FLAM_A SINE Alu -71 61 6 758 233 61 17 chr10 5485173 5485353 -140103935 + MER58A DNA MER1_type 37 224 0 281 167 0 0 chr10 5485362 5485410 -140103878 + L2 LINE L2 3263 3310 -3 237 162 0 0 chr10 5485463 5485500 -140103788 - MLT1A1 LTR MaLR 0 365 329 969 150 6 50 chr10 5485500 5485680 -140103608 + FAM SINE Alu 1 172 -13 1455 205 33 45 chr10 5485680 5486017 -140103271 - MLT1A1 LTR MaLR -32 333 1 376 292 116 13 chr10 5486233 5486404 -140102884 - MIR SINE MIR -43 165 2 194 291 50 92 chr10 5486701 5486842 -140102446 - MIR3 SINE MIR -71 137 3 2185 117 0 9 chr10 5486869 5487185 -140102103 - AluSq SINE Alu 0 313 1 411 213 11 21 chr10 5487396 5487490 -140101798 - MER5B DNA MER1_type -85 93 1 230 211 0 58 chr10 5487490 5487525 -140101763 - MIR3 SINE MIR -51 157 126 409 285 18 34 chr10 5488809 5488992 -140100296 - MIR SINE MIR -79 129 8 22 0 0 0 chr10 5489737 5489759 -140099529 + AT_rich Low_complexity Low_complexity 1 22 0 727 286 64 58 chr10 5491173 5491664 -140097624 + L1MC5 LINE L1 6414 6884 -924 189 94 0 0 chr10 5491753 5491785 -140097503 + (TTCC)n Simple_repeat Simple_repeat 4 35 0 1589 173 22 0 chr10 5491786 5492063 -140097225 - AluJo SINE Alu -21 291 9 8435 236 32 18 chr10 5492072 5492356 -140096932 - L1MCa LINE L1 -1509 4917 4638 1746 104 8 4 chr10 5492356 5492605 -140096683 - AluSg SINE Alu -14 296 47 8435 236 32 18 chr10 5492605 5494678 -140094610 - L1MCa LINE L1 -1788 4638 2517 3219 144 19 0 chr10 5494678 5495193 -140094095 + L1PA16 LINE L1 5642 6166 0 8435 236 32 18 chr10 5495193 5495437 -140093851 - L1MCa LINE L1 -3909 2517 2278 2347 163 29 51 chr10 5495441 5495696 -140093592 - L1MCa LINE L1 -4234 2192 1933 2075 110 7 3 chr10 5495696 5495987 -140093301 + AluSq SINE Alu 1 292 -21 2347 163 29 51 chr10 5495987 5496006 -140093282 - L1MCa LINE L1 -4493 1933 1915 2067 117 0 13 chr10 5496006 5496305 -140092983 + AluSq SINE Alu 1 295 -18 2347 163 29 51 chr10 5496305 5496520 -140092768 - L1MCa LINE L1 -4511 1915 1713 488 172 20 0 chr10 5496514 5496613 -140092675 - L1MCa LINE L1 -5381 1045 945 * 1722 115 33 62 chr10 5496614 5496918 -140092370 - AluSq SINE Alu -13 300 6 1300 142 0 13 chr10 5497065 5497297 -140091991 + AluSq SINE Alu 85 313 0 4022 143 9 6 chr10 5498309 5498960 -140090328 + MER39B LTR ERV1 1 653 0 2139 77 46 82 chr10 5499253 5499481 -140089807 + L1MA2 LINE L1 5927 6137 -167 2002 131 3 0 chr10 5499481 5499772 -140089516 + AluSx SINE Alu 1 292 -20 2139 77 46 82 chr10 5499772 5499935 -140089353 + L1MA2 LINE L1 6137 6304 0 2217 128 32 11 chr10 5500027 5500403 -140088885 - MLT1B LTR MaLR -4 386 3 1797 134 44 103 chr10 5500446 5500654 -140088634 - THE1B LTR MaLR 0 364 188 2187 119 0 0 chr10 5500654 5500966 -140088322 + AluSq SINE Alu 1 312 -1 1797 134 44 103 chr10 5500966 5501144 -140088144 - THE1B LTR MaLR -176 188 1 222 322 76 66 chr10 5501244 5501533 -140087755 - L2 LINE L2 -561 2753 2462 296 354 39 8 chr10 5501769 5501896 -140087392 + MIR SINE MIR 99 229 -33 227 243 13 13 chr10 5503948 5504040 -140085248 - MIR SINE MIR -61 147 93 1595 199 112 23 chr10 5504565 5504641 -140084647 + MLT1D LTR MaLR 29 97 -408 2253 114 75 41 chr10 5504641 5505053 -140084235 + MSTC LTR MaLR 1 426 -2 1595 199 112 23 chr10 5505053 5505412 -140083876 + MLT1D LTR MaLR 97 503 -2 378 210 25 0 chr10 5505545 5505626 -140083662 - MIR SINE MIR -151 111 29 180 376 30 20 chr10 5505746 5505847 -140083441 + MIR SINE MIR 59 160 -102 445 311 202 8 chr10 5506118 5506475 -140082813 + L3 LINE CR1 1122 1547 -30 312 282 36 0 chr10 5507020 5507130 -140082158 + MER5A DNA MER1_type 74 187 -2 295 263 116 11 chr10 5508330 5508425 -140080863 - MIR SINE MIR 0 262 158 259 218 218 11 chr10 5510869 5510956 -140078332 - L2 LINE L2 -269 3044 2940 416 60 15 60 chr10 5511061 5511128 -140078160 + Alu SINE Alu 232 295 -17 21 36 0 0 chr10 5511854 5511882 -140077406 + AT_rich Low_complexity Low_complexity 1 28 0 419 177 0 0 chr10 5514358 5514437 -140074851 + LTR41 LTR ERVL 57 135 -638 2384 113 0 3 chr10 5514948 5515257 -140074031 + AluSx SINE Alu 1 308 -4 1964 152 11 55 chr10 5516164 5516332 -140072956 + MLT1A1 LTR MaLR 1 175 -190 2427 97 0 3 chr10 5516332 5516642 -140072646 + AluSx SINE Alu 1 309 -3 1964 152 11 55 chr10 5516642 5516855 -140072433 + MLT1A1 LTR MaLR 175 365 0 337 265 32 91 chr10 5516865 5517084 -140072204 - MLT1L LTR MaLR -194 391 112 2194 105 9 6 chr10 5517216 5517547 -140071741 + THE1B LTR MaLR 1 427 -30 691 175 0 113 chr10 5517557 5517717 -140071571 + Tigger1 DNA MER2_type 1 142 -2276 1085 184 14 0 chr10 5517738 5517945 -140071343 + Tigger1 DNA MER2_type 2209 2418 0 423 0 0 0 chr10 5519663 5519710 -140069578 + (TG)n Simple_repeat Simple_repeat 2 48 0 227 244 167 58 chr10 5519889 5520045 -140069243 + MER115 DNA AcHobo 140 312 -381 187 335 238 19 chr10 5520515 5521553 -140067735 - L2 LINE L2 -442 2872 1608 299 327 121 18 chr10 5521774 5521939 -140067349 - MIR3 SINE MIR -23 185 4 222 355 59 67 chr10 5522746 5523137 -140066151 - L2 LINE L2 -32 3240 2853 2413 85 0 19 chr10 5523140 5523457 -140065831 - AluY SINE Alu 0 311 1 929 209 29 9 chr10 5526626 5526836 -140062452 + MER41B LTR ERV1 422 635 0 238 291 90 0 chr10 5526909 5527031 -140062257 - MIR SINE MIR -66 142 19 2535 113 53 5 chr10 5527190 5527605 -140061683 + LTR49 LTR ERV1 1 435 -160 775 168 81 23 chr10 5527996 5528169 -140061119 + LTR49 LTR ERV1 413 595 0 183 268 71 0 chr10 5528320 5528376 -140060912 - L2 LINE L2 -5 3308 3249 2243 116 0 3 chr10 5528504 5528805 -140060483 + AluSx SINE Alu 1 300 -12 1401 132 182 23 chr10 5528867 5529125 -140060163 + AluJb SINE Alu 2 300 -2 2360 121 0 0 chr10 5529772 5530085 -140059203 - AluSq SINE Alu 0 313 1 1662 178 3 39 chr10 5530087 5530396 -140058892 - AluJb SINE Alu -9 303 6 2265 131 0 0 chr10 5530566 5530878 -140058410 - AluSx SINE Alu 0 312 1 636 293 120 10 chr10 5530933 5531117 -140058171 + L2 LINE L2 2044 2206 -1108 1745 189 7 0 chr10 5531117 5531413 -140057875 - AluJo SINE Alu -14 298 1 636 293 120 10 chr10 5531413 5531528 -140057760 + L2 LINE L2 2206 2376 -938 1019 128 7 0 chr10 5531541 5531682 -140057606 + AluSq/x SINE Alu 1 142 -171 1614 135 8 4 chr10 5531816 5532061 -140057227 + AluSg/x SINE Alu 66 311 -1 2059 152 3 18 chr10 5532230 5532572 -140056716 - MER1B DNA MER1_type 0 337 1 21 0 0 0 chr10 5532848 5532869 -140056419 + AT_rich Low_complexity Low_complexity 1 21 0 685 328 109 40 chr10 5533166 5533562 -140055726 + L3 LINE CR1 73 495 -1082 300 247 43 54 chr10 5533635 5533728 -140055560 - L2 LINE L2 -2 3311 3220 334 267 81 34 chr10 5533755 5533958 -140055330 + MIR SINE MIR 18 236 -26 798 325 153 13 chr10 5534069 5534592 -140054696 + L3 LINE CR1 768 1363 -214 188 61 61 0 chr10 5538067 5538100 -140051188 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 216 97 0 0 chr10 5538920 5538951 -140050337 + (GA)n Simple_repeat Simple_repeat 2 32 0 24 32 0 0 chr10 5539386 5539417 -140049871 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr10 5539782 5539803 -140049485 + AT_rich Low_complexity Low_complexity 1 21 0 203 243 225 45 chr10 5541724 5541835 -140047453 + MIR3 SINE MIR 68 198 -10 229 155 31 103 chr10 5543300 5543397 -140045891 + L2 LINE L2 1636 1725 -1589 1968 145 0 38 chr10 5543410 5543727 -140045561 - AluSx SINE Alu -7 305 1 189 301 108 60 chr10 5544556 5544722 -140044566 + L2 LINE L2 2968 3141 -131 475 261 34 8 chr10 5546081 5546200 -140043088 + L2 LINE L2 3191 3312 -1 2073 125 3 0 chr10 5546492 5546789 -140042499 - AluSg SINE Alu -12 298 1 745 149 51 93 chr10 5548370 5548445 -140040843 + ORSL DNA AcHobo 42 119 -156 1764 132 106 0 chr10 5548445 5548710 -140040578 - AluSx SINE Alu -19 293 1 745 149 51 93 chr10 5548710 5548848 -140040440 + ORSL DNA AcHobo 119 246 -29 709 249 24 6 chr10 5548882 5549047 -140040241 + MER5B DNA MER1_type 8 175 -3 2134 143 13 28 chr10 5549342 5549389 -140039899 - L1MB3 LINE L1 -28 6155 6109 2369 125 37 6 chr10 5549389 5549742 -140039546 + THE1B LTR MaLR 1 364 0 2134 143 13 28 chr10 5549742 5550087 -140039201 - L1MB3 LINE L1 -74 6109 5769 291 268 42 0 chr10 5550093 5550164 -140039124 + L2 LINE L2 3216 3289 -24 1803 195 0 0 chr10 5550688 5550985 -140038303 - AluJo SINE Alu -8 304 8 892 201 6 11 chr10 5551042 5551221 -140038067 - AluJo SINE Alu -91 221 44 201 209 47 0 chr10 5552080 5552123 -140037165 + (CATG)n Simple_repeat Simple_repeat 3 47 0 24 0 0 0 chr10 5552204 5552228 -140037060 + AT_rich Low_complexity Low_complexity 1 24 0 3422 176 39 41 chr10 5552895 5553514 -140035774 + L1 LINE L1 4513 5130 -1038 2171 133 0 0 chr10 5553514 5553799 -140035489 + AluSx SINE Alu 1 315 0 222 0 0 33 chr10 5553799 5553829 -140035459 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 3422 176 39 41 chr10 5553829 5554126 -140035162 + L1 LINE L1 5130 5426 -742 300 235 0 29 chr10 5554128 5554196 -140035092 - L1ME LINE L1 -287 5834 5769 633 221 61 22 chr10 5554206 5554387 -140034901 + LTR41 LTR ERVL 1 188 -585 252 265 8 51 chr10 5554798 5554915 -140034373 + LTR41 LTR ERVL 656 767 -6 1176 100 0 0 chr10 5555114 5555264 -140034024 - AluSg/x SINE Alu -9 301 152 303 327 73 27 chr10 5555274 5555424 -140033864 - MIR SINE MIR -63 199 43 560 256 122 99 chr10 5555942 5556147 -140033141 + MLT1J LTR MaLR 6 205 -306 2475 86 3 0 chr10 5556147 5556448 -140032840 - AluSg SINE Alu -8 302 1 560 256 122 99 chr10 5556448 5556735 -140032553 + MLT1J LTR MaLR 205 509 -2 430 278 28 45 chr10 5556779 5556955 -140032333 + MIR SINE MIR 35 207 -55 366 234 170 18 chr10 5557388 5557559 -140031729 + MIR SINE MIR 44 240 -22 3339 171 20 12 chr10 5557564 5557880 -140031408 + L1MCa LINE L1 202 514 -5912 1662 151 80 37 chr10 5557880 5557927 -140031361 + MER47A DNA MER2_type 1 45 -2278 2309 112 0 13 chr10 5557927 5558241 -140031047 - AluSx SINE Alu -2 310 1 1662 151 80 37 chr10 5558241 5558544 -140030744 + MER47A DNA MER2_type 45 366 0 3339 171 20 12 chr10 5558544 5558876 -140030412 + L1MCa LINE L1 514 855 -5571 474 268 140 0 chr10 5559058 5559222 -140030066 + MIR SINE MIR 2 188 -74 305 349 0 0 chr10 5559324 5559433 -140029855 - MIR SINE MIR -69 139 31 2355 106 0 6 chr10 5559530 5559842 -140029446 - AluSg SINE Alu 0 310 1 1056 23 78 0 chr10 5560361 5560489 -140028799 - MER85 DNA T2_type -1 138 1 248 265 15 0 chr10 5560656 5560724 -140028564 + MIR SINE MIR 76 144 -64 233 306 54 18 chr10 5560996 5561107 -140028181 - L2 LINE L2 -509 2805 2691 393 244 0 0 chr10 5561963 5562041 -140027247 + MER21B LTR ERV1 13 90 -773 1803 216 91 93 chr10 5562063 5562300 -140026988 + MER21B LTR ERV1 19 255 -608 1464 200 11 0 chr10 5562300 5562565 -140026723 + AluJb SINE Alu 16 283 -29 1803 216 91 93 chr10 5562565 5563104 -140026184 + MER21B LTR ERV1 255 794 -69 250 337 125 16 chr10 5563271 5563455 -140025833 + L3 LINE CR1 1303 1506 -71 346 300 36 36 chr10 5563514 5563654 -140025634 + MIR3 SINE MIR 42 181 -27 1837 183 7 13 chr10 5563654 5563954 -140025334 - AluJb SINE Alu -14 298 1 1193 192 9 18 chr10 5565306 5565525 -140023763 - AluJo SINE Alu -95 217 1 1518 204 47 6 chr10 5565553 5565892 -140023396 - MLT1A1 LTR MaLR 0 365 13 2211 130 33 25 chr10 5566640 5567001 -140022287 - THE1B LTR MaLR 0 364 1 216 235 0 0 chr10 5569359 5569427 -140019861 + CT-rich Low_complexity Low_complexity 1 68 0 352 336 22 0 chr10 5570247 5570381 -140018907 - MIR3 SINE MIR -52 156 20 346 179 64 0 chr10 5570652 5570730 -140018558 - Charlie5 DNA MER1_type -2503 109 27 183 100 0 0 chr10 5571817 5571847 -140017441 + (A)n Simple_repeat Simple_repeat 1 30 0 2018 104 4 0 chr10 5573195 5573464 -140015824 - AluSc SINE Alu -39 270 1 22 0 0 0 chr10 5575487 5575509 -140013779 + AT_rich Low_complexity Low_complexity 1 22 0 527 184 0 10 chr10 5576772 5576870 -140012418 + FLAM_A SINE Alu 35 131 -11 243 0 0 0 chr10 5577421 5577448 -140011840 + (T)n Simple_repeat Simple_repeat 1 27 0 1262 169 21 104 chr10 5580495 5580750 -140008538 + MER66A-int LTR ERV1 3224 3499 -3177 2486 113 19 19 chr10 5580750 5581114 -140008174 + THE1B LTR MaLR 1 364 0 1262 169 21 104 chr10 5581114 5581481 -140007807 + MER66A-int LTR ERV1 3499 4437 -2239 462 194 78 10 chr10 5581481 5581584 -140007704 + MER4D LTR ERV1 52 161 -711 957 180 71 38 chr10 5581672 5581883 -140007405 + MER66A-int LTR ERV1 4611 4828 -1848 1916 158 11 29 chr10 5581977 5582042 -140007246 + MER66A-int LTR ERV1 6334 6399 -277 2358 95 7 0 chr10 5582042 5582338 -140006950 - AluSp SINE Alu -12 301 4 1916 158 11 29 chr10 5582338 5582621 -140006667 + MER66A-int LTR ERV1 6399 6676 0 1131 201 139 37 chr10 5582659 5583048 -140006240 + MER66A LTR ERV1 97 428 -50 452 173 109 18 chr10 5583365 5583475 -140005813 + MER53 DNA DNA 1 120 -69 328 206 244 23 chr10 5583381 5583512 -140005776 - MER53 DNA DNA -7 182 23 * 312 255 60 87 chr10 5584652 5584836 -140004452 + MIR SINE MIR 68 246 -16 186 231 0 92 chr10 5585574 5585639 -140003649 - L3 LINE CR1 -710 867 809 528 204 148 28 chr10 5587140 5587282 -140002006 - MIR SINE MIR -91 171 13 205 302 94 19 chr10 5588572 5588678 -140000610 + L2 LINE L2 3200 3313 0 449 248 50 8 chr10 5589358 5589479 -139999809 - L2 LINE L2 -11 3261 3136 576 266 130 11 chr10 5590409 5590593 -139998695 - MIR SINE MIR -53 209 4 6400 24 0 0 chr10 5594579 5595556 -139993732 - L1PA3 LINE L1 -141 6014 5038 2079 154 59 77 chr10 5595731 5596005 -139993283 - MER31A LTR ERV1 0 485 222 3421 121 31 13 chr10 5596005 5596558 -139992730 - L1MA2 LINE L1 -1 6303 5741 2079 154 59 77 chr10 5596558 5596777 -139992511 - MER31A LTR ERV1 -263 222 1 331 325 36 24 chr10 5597992 5598158 -139991130 + (CATG)n Simple_repeat Simple_repeat 1 168 0 * 379 385 0 6 chr10 5598050 5598229 -139991059 + (CA)n Simple_repeat Simple_repeat 1 178 0 416 363 18 6 chr10 5598894 5599062 -139990226 - MIR SINE MIR -69 193 24 532 227 81 86 chr10 5599199 5599903 -139989385 + L1MC5 LINE L1 6780 7670 -291 2256 118 0 0 chr10 5599903 5600199 -139989089 - AluSx SINE Alu -15 297 2 532 227 81 86 chr10 5600199 5600430 -139988858 + L1MC5 LINE L1 7670 7901 -60 316 224 17 60 chr10 5600723 5600839 -139988449 + L2 LINE L2 2985 3095 -177 256 241 218 30 chr10 5602476 5602609 -139986679 - MIR3 SINE MIR -41 167 10 214 167 0 0 chr10 5604065 5604101 -139985187 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 201 0 100 0 chr10 5604304 5604334 -139984954 + T-rich Low_complexity Low_complexity 3 180 0 1990 126 7 10 chr10 5604334 5604628 -139984660 - AluSx SINE Alu -1 331 10 5132 102 10 0 chr10 5604628 5605340 -139983948 - LTR30 LTR ERV1 -2 720 2 674 301 74 7 chr10 5606495 5606900 -139982388 + L1M4 LINE L1 3344 3775 -2371 388 308 61 35 chr10 5607655 5607853 -139981435 + MIR3 SINE MIR 3 205 -3 859 202 12 6 chr10 5614611 5614784 -139974504 + FAM SINE Alu 1 174 -1 351 0 0 0 chr10 5616496 5616535 -139972753 + (TAA)n Simple_repeat Simple_repeat 2 40 0 23 33 0 0 chr10 5616993 5617023 -139972265 + AT_rich Low_complexity Low_complexity 1 30 0 204 67 0 0 chr10 5622906 5622936 -139966352 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 4109 148 21 83 chr10 5625504 5625831 -139963457 - LTR39 LTR ERV1 -29 754 408 2092 109 0 6 chr10 5625831 5626142 -139963146 + AluSx SINE Alu 1 309 -3 4109 148 21 83 chr10 5626142 5626534 -139962754 - LTR39 LTR ERV1 -375 408 88 2016 116 7 3 chr10 5626534 5626828 -139962460 - AluSx SINE Alu -17 295 1 4109 148 21 83 chr10 5626828 5626911 -139962377 - LTR39 LTR ERV1 -695 88 1 1982 121 0 7 chr10 5627786 5628075 -139961213 + AluSx SINE Alu 1 287 -25 253 205 110 16 chr10 5629028 5629140 -139960148 - L1ME4a LINE L1 -84 6025 1141 1957 159 43 0 chr10 5629178 5629504 -139959784 + MER47A DNA MER2_type 27 366 0 295 289 112 48 chr10 5629508 5629658 -139959630 - L1ME4a LINE L1 -223 5898 5732 1914 119 3 17 chr10 5629658 5629952 -139959336 - AluSx SINE Alu -22 290 1 295 289 112 48 chr10 5629952 5629988 -139959300 - L1ME4a LINE L1 -389 5732 5700 216 111 0 0 chr10 5630067 5630103 -139959185 + (TTCC)n Simple_repeat Simple_repeat 2 37 0 272 243 119 89 chr10 5630128 5630330 -139958958 - MLT1J LTR MaLR -103 408 201 2104 179 6 6 chr10 5631484 5631847 -139957441 - MLT1A1 LTR MaLR 0 365 3 1842 193 63 30 chr10 5632239 5632665 -139956623 - L1MD1 LINE L1 0 6242 5803 233 298 134 72 chr10 5632665 5632927 -139956361 + L2 LINE L2 2688 2965 -349 504 287 126 18 chr10 5632931 5633154 -139956134 - MIR SINE MIR 0 262 16 1524 163 62 24 chr10 5633486 5633774 -139955514 - AluJo SINE Alu -13 299 1 256 286 37 55 chr10 5633788 5633879 -139955409 - L1MD1 LINE L1 -382 5739 5648 2126 116 0 0 chr10 5633879 5634180 -139955108 - AluSx SINE Alu -11 301 1 256 286 37 55 chr10 5634180 5634324 -139954964 - L1MD1 LINE L1 -473 5648 5506 816 188 0 7 chr10 5634385 5634529 -139954759 + MLT1D LTR MaLR 363 505 0 26 0 0 0 chr10 5634790 5634816 -139954472 + AT_rich Low_complexity Low_complexity 1 26 0 198 323 62 21 chr10 5635765 5635861 -139953427 + L2 LINE L2 3199 3298 -15 1987 146 0 3 chr10 5636003 5636312 -139952976 + AluSx SINE Alu 1 308 -4 378 42 0 0 chr10 5636702 5636750 -139952538 + (CA)n Simple_repeat Simple_repeat 2 49 0 611 152 163 20 chr10 5637156 5637328 -139951960 - MER66A LTR ERV1 -261 341 97 239 250 0 0 chr10 5637669 5637721 -139951567 - MIR SINE MIR -139 123 72 1555 178 93 77 chr10 5637946 5638413 -139950875 + MER66A LTR ERV1 97 478 0 7682 198 71 44 chr10 5638589 5639096 -139950192 + MER66A-int LTR ERV1 197 689 -5987 1530 172 59 0 chr10 5639096 5639369 -139949919 - AluSg SINE Alu -21 289 1 7682 198 71 44 chr10 5639369 5640236 -139949052 + MER66A-int LTR ERV1 689 1635 -5041 1572 171 20 7 chr10 5640236 5640529 -139948759 + AluJo SINE Alu 1 297 -15 7682 198 71 44 chr10 5640529 5641021 -139948267 + MER66A-int LTR ERV1 1635 2113 -4563 4374 211 39 19 chr10 5641131 5642020 -139947268 + MER66A-int LTR ERV1 2342 3248 -3428 318 176 0 40 chr10 5642010 5642084 -139947204 + LTR38-int LTR ERV1 1407 1477 -309 * 21 36 0 0 chr10 5642127 5642155 -139947133 + AT_rich Low_complexity Low_complexity 1 28 0 305 279 56 50 chr10 5742611 5742790 -139846498 + MIR3 SINE MIR 23 202 -6 696 127 0 0 chr10 5743950 5744060 -139845228 + (CA)n Simple_repeat Simple_repeat 1 110 0 572 210 25 0 chr10 5745292 5745537 -139843751 + GA-rich Low_complexity Low_complexity 1 251 0 253 239 72 0 chr10 5745642 5745741 -139843547 - L1ME LINE L1 -516 5605 5497 436 192 67 50 chr10 5746220 5746340 -139842948 - MER20 DNA MER1_type -50 169 48 192 139 116 0 chr10 5746463 5746506 -139842782 - L2 LINE L2 0 3272 3225 1463 166 101 18 chr10 5748638 5748915 -139840373 - AluJb SINE Alu -12 300 1 1756 99 0 0 chr10 5748935 5749158 -139840130 - AluSx SINE Alu -89 223 1 566 154 135 58 chr10 5749174 5749330 -139839958 - MER2 DNA MER2_type -135 210 43 237 196 43 43 chr10 5750146 5750238 -139839050 - L1ME4a LINE L1 -74 6047 5956 1423 132 194 3 chr10 5750591 5750879 -139838409 + MER7A DNA MER2_type 5 345 -1 323 261 137 6 chr10 5751181 5751342 -139837946 + MIR SINE MIR 44 225 -37 1748 157 15 0 chr10 5752364 5752638 -139836650 - AluJo SINE Alu -21 291 14 239 288 41 62 chr10 5754506 5754652 -139834636 - MARNA DNA Mariner -24 562 420 1437 198 16 39 chr10 5754899 5755207 -139834081 - AluJo SINE Alu -11 301 1 2115 108 0 3 chr10 5755326 5755612 -139833676 - AluSx SINE Alu -20 292 8 2643 45 0 13 chr10 5755835 5756148 -139833140 - AluY SINE Alu -2 309 1 316 118 0 0 chr10 5756381 5756432 -139832856 + Alu SINE Alu 251 301 -1 611 201 30 0 chr10 5756440 5756574 -139832714 - L1MB5 LINE L1 -46 6128 5991 212 296 34 0 chr10 5756585 5756673 -139832615 - L2 LINE L2 -34 3238 3148 2101 88 50 0 chr10 5756743 5757026 -139832262 + AluSg SINE Alu 1 297 -13 490 309 0 8 chr10 5757066 5757192 -139832096 - MIR SINE MIR -91 171 47 1110 198 64 28 chr10 5757194 5757358 -139831930 - L1MB5 LINE L1 -189 5985 5828 2335 68 20 0 chr10 5757358 5757650 -139831638 - AluY SINE Alu -13 298 1 1110 198 64 28 chr10 5757650 5757847 -139831441 - L1MB5 LINE L1 -346 5828 5611 1032 199 38 4 chr10 5757847 5758083 -139831205 - AluJb SINE Alu -5 307 64 2082 126 0 11 chr10 5758204 5758524 -139830764 + AluSx SINE Alu 1 317 0 730 201 65 15 chr10 5758608 5758844 -139830444 + MLT1G LTR MaLR 247 590 0 22 0 0 0 chr10 5758965 5758987 -139830301 + AT_rich Low_complexity Low_complexity 1 22 0 2275 99 20 0 chr10 5758992 5759295 -139829993 + AluSq SINE Alu 1 309 -4 1694 121 16 39 chr10 5759309 5759565 -139829723 + AluSx SINE Alu 3 252 -60 286 118 0 0 chr10 5759739 5759790 -139829498 + AluSx SINE Alu 251 301 0 297 308 55 55 chr10 5760054 5760366 -139828922 - L1ME LINE L1 -5652 418 107 1708 183 7 0 chr10 5760393 5760672 -139828616 - AluJb SINE Alu -23 289 9 1145 151 5 15 chr10 5760805 5761004 -139828284 - MER50-int LTR ERV1 -6724 481 285 215 269 0 0 chr10 5761180 5761232 -139828056 + L2 LINE L2 2599 2650 -664 2453 85 3 0 chr10 5761232 5761537 -139827751 - AluSp SINE Alu -7 306 1 2103 127 6 16 chr10 5761545 5761860 -139827428 - AluSx SINE Alu 0 312 1 215 270 132 78 chr10 5762013 5762217 -139827071 + L2 LINE L2 2856 3070 -243 633 165 1 46 chr10 5762223 5762368 -139826920 + L1MA6 LINE L1 5823 5956 -210 2368 97 0 0 chr10 5762373 5762663 -139826625 + AluSg SINE Alu 18 307 -3 436 190 123 43 chr10 5763566 5763819 -139825469 + L1ME LINE L1 530 802 -5268 2167 103 13 0 chr10 5763917 5764217 -139825071 + AluSc SINE Alu 1 304 -5 250 115 97 0 chr10 5764217 5764276 -139825012 + AluSg/x SINE Alu 132 189 -111 2338 233 88 63 chr10 5764482 5765535 -139823753 + L1M4 LINE L1 4005 5030 -1116 2281 91 7 0 chr10 5765535 5765833 -139823455 + AluY SINE Alu 1 300 -11 2338 233 88 63 chr10 5765833 5765921 -139823367 + L1M4 LINE L1 5030 5114 -1032 2042 134 7 3 chr10 5765921 5766211 -139823077 + AluSx SINE Alu 1 291 -21 2338 233 88 63 chr10 5766211 5766276 -139823012 + L1M4 LINE L1 5114 5242 -904 5432 65 9 9 chr10 5766449 5767170 -139822118 - L1PA7 LINE L1 -96 6058 5335 2136 116 0 3 chr10 5767170 5767454 -139821834 - AluSx SINE Alu -28 284 2 5432 65 9 9 chr10 5767454 5767472 -139821816 - L1PA7 LINE L1 -818 5336 5319 24 0 0 0 chr10 5768986 5769010 -139820278 + AT_rich Low_complexity Low_complexity 1 24 0 2201 121 19 10 chr10 5769079 5769386 -139819902 + AluSq SINE Alu 1 310 -3 1796 150 4 4 chr10 5770269 5770536 -139818752 + AluSx SINE Alu 1 267 -45 2258 125 0 0 chr10 5770808 5771112 -139818176 - AluSx SINE Alu -4 308 5 1378 150 13 13 chr10 5771277 5771504 -139817784 + AluJb SINE Alu 25 251 -61 180 182 0 0 chr10 5771771 5771804 -139817484 - L3 LINE CR1 -1348 229 197 1323 163 30 49 chr10 5773875 5774139 -139815149 - AluJo SINE Alu -14 298 40 207 301 68 14 chr10 5774732 5774805 -139814483 - MIR3 SINE MIR -20 188 112 351 237 11 0 chr10 5775177 5775270 -139814018 + L1M3 LINE L1 4463 4556 -1590 2113 197 115 47 chr10 5775313 5775793 -139813495 + L1M3 LINE L1 4669 5115 -1068 777 174 0 36 chr10 5775793 5775931 -139813357 + FLAM_A SINE Alu 1 133 0 2113 197 115 47 chr10 5775931 5776077 -139813211 + L1M3 LINE L1 5115 5250 -933 2168 109 14 0 chr10 5776077 5776370 -139812918 + AluSp SINE Alu 1 297 -16 2113 197 115 47 chr10 5776370 5776609 -139812679 + L1M3 LINE L1 5250 5603 -580 410 135 189 0 chr10 5776718 5776792 -139812496 - AluSg1 SINE Alu -220 89 2 673 179 179 21 chr10 5777161 5777176 -139812112 - AluJo SINE Alu -143 169 158 1649 169 3 44 chr10 5777176 5777472 -139811816 - AluJb SINE Alu -8 304 21 673 179 179 21 chr10 5777472 5777522 -139811766 - AluJo SINE Alu -154 158 117 186 43 0 0 chr10 5777522 5777545 -139811743 + (GTCTG)n Simple_repeat Simple_repeat 5 27 0 673 179 179 21 chr10 5777545 5777623 -139811665 - AluJo SINE Alu -195 117 2 2270 104 0 31 chr10 5777632 5777949 -139811339 - AluSg1 SINE Alu -2 307 1 490 208 2 97 chr10 5777980 5778055 -139811233 - L1ME2 LINE L1 -1 6165 6110 2214 107 0 0 chr10 5778055 5778336 -139810952 - AluSx SINE Alu -16 296 16 490 208 2 97 chr10 5778336 5778433 -139810855 - L1ME2 LINE L1 -56 6110 6005 2272 95 17 3 chr10 5778467 5778763 -139810525 - AluSx SINE Alu -12 300 1 198 0 0 0 chr10 5778781 5778803 -139810485 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 190 240 60 0 chr10 5778803 5778853 -139810435 - L2 LINE L2 -78 3235 3183 669 106 7 78 chr10 5778910 5778930 -139810358 + L1M LINE L1 5266 5286 -894 2008 102 42 7 chr10 5778930 5779213 -139810075 + AluSx SINE Alu 1 293 -19 669 106 7 78 chr10 5779213 5779334 -139809954 + L1M LINE L1 5286 5397 -783 1413 147 0 22 chr10 5779435 5779667 -139809621 - AluJb SINE Alu -85 227 1 258 155 52 0 chr10 5779668 5779726 -139809562 + L1MB5 LINE L1 6114 6174 0 298 341 82 16 chr10 5780724 5780906 -139808382 - MIR SINE MIR -16 246 53 224 120 20 40 chr10 5780939 5780989 -139808299 + A-rich Low_complexity Low_complexity 4 52 0 1862 148 173 0 chr10 5781413 5781778 -139807510 - MSTA LTR MaLR 0 428 1 1205 36 0 7 chr10 5782001 5782138 -139807150 + AluSg SINE Alu 2 137 -173 1658 50 0 15 chr10 5782144 5782385 -139806903 + AluY SINE Alu 86 323 0 2039 150 0 3 chr10 5782388 5782695 -139806593 + AluSx SINE Alu 1 306 -6 446 161 0 0 chr10 5782697 5782778 -139806510 + L1M LINE L1 5312 5392 -788 2039 113 3 7 chr10 5782793 5783099 -139806189 + AluSx SINE Alu 1 305 0 180 0 0 0 chr10 5783413 5783433 -139805855 + (TA)n Simple_repeat Simple_repeat 2 21 0 1751 184 0 3 chr10 5783761 5784054 -139805234 + AluJb SINE Alu 3 294 -18 2092 142 0 0 chr10 5784712 5785008 -139804280 - AluSx SINE Alu -14 298 3 2315 99 10 0 chr10 5785013 5785316 -139803972 - AluSx SINE Alu -6 306 1 878 178 18 6 chr10 5785318 5785481 -139803807 - AluJb SINE Alu -17 295 131 2403 89 10 0 chr10 5786308 5786611 -139802677 + AluSp SINE Alu 1 306 -7 1858 122 3 88 chr10 5786621 5786760 -139802528 + AluSx SINE Alu 1 99 -213 2223 105 7 3 chr10 5786760 5787054 -139802234 + AluSg SINE Alu 1 295 -15 1858 122 3 88 chr10 5787054 5787234 -139802054 + AluSx SINE Alu 99 293 -19 459 210 107 114 chr10 5787844 5788190 -139801098 + MLT1F LTR MaLR 166 555 0 209 311 0 0 chr10 5788190 5788251 -139801037 - L2 LINE L2 -819 2495 2435 2125 116 3 0 chr10 5788271 5788578 -139800710 + AluSq SINE Alu 1 308 0 1680 185 3 10 chr10 5788839 5789141 -139800147 + AluJb SINE Alu 1 300 -12 303 349 128 45 chr10 5789202 5789655 -139799633 - L2 LINE L2 -4 3268 2739 2380 90 13 0 chr10 5789655 5789955 -139799333 - AluSx SINE Alu -8 304 1 303 349 128 45 chr10 5789955 5790133 -139799155 - L2 LINE L2 -533 2739 2577 1179 123 12 0 chr10 5790283 5790453 -139798835 - AluSg/x SINE Alu -10 302 131 22 0 0 0 chr10 5790513 5790535 -139798753 + AT_rich Low_complexity Low_complexity 1 22 0 880 150 58 46 chr10 5790741 5790892 -139798396 - AluJo SINE Alu -18 294 139 2218 107 0 3 chr10 5790892 5791182 -139798106 - AluSg1 SINE Alu -20 289 1 880 150 58 46 chr10 5791182 5791203 -139798085 - AluJo SINE Alu -173 139 120 944 190 12 0 chr10 5791491 5791654 -139797634 + AluJb SINE Alu 135 299 -13 185 105 0 26 chr10 5793008 5793046 -139796242 + (TCCCC)n Simple_repeat Simple_repeat 2 38 0 242 206 147 15 chr10 5793737 5793805 -139795483 - MER5A DNA MER1_type -83 106 30 346 313 120 7 chr10 5794175 5794325 -139794963 - MIR SINE MIR -68 194 28 198 0 0 0 chr10 5794401 5794423 -139794865 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2130 113 0 0 chr10 5794436 5794710 -139794578 - AluSx SINE Alu -38 274 1 487 127 0 38 chr10 5794966 5795045 -139794243 - Tigger3(Golem) DNA MER2_type -730 2299 2224 2138 90 54 0 chr10 5795097 5795375 -139793913 - AluSc SINE Alu -16 293 1 1143 121 60 16 chr10 5795646 5795828 -139793460 + MER30B DNA MER1_type 1 190 0 183 397 0 15 chr10 5795865 5795933 -139793355 - MIR SINE MIR -195 67 1 617 132 0 101 chr10 5796157 5796197 -139793091 - L1MB3 LINE L1 0 6183 6141 2436 69 16 3 chr10 5796197 5796500 -139792788 - AluSq SINE Alu -6 307 1 617 132 0 101 chr10 5796500 5796618 -139792670 - L1MB3 LINE L1 -42 6141 6041 307 280 21 0 chr10 5796619 5796762 -139792526 - AluSg/x SINE Alu -17 283 138 9976 91 10 8 chr10 5796901 5798323 -139790965 - HERV9 LTR ERV1 -5699 2700 1277 1674 85 229 178 chr10 5798333 5798839 -139790449 - LTR12 LTR ERV1 -130 584 53 250 250 0 0 chr10 5798839 5798891 -139790397 - LTR30 LTR ERV1 -670 52 1 399 283 44 0 chr10 5798891 5799050 -139790238 - L1MB1 LINE L1 -11 6157 5992 189 280 0 67 chr10 5799054 5799129 -139790159 - MER5A DNA MER1_type -115 74 5 291 286 99 11 chr10 5799195 5799286 -139790002 - L2 LINE L2 -2127 1187 1089 358 279 62 93 chr10 5799688 5799946 -139789342 + L2 LINE L2 2891 3140 -132 2209 138 0 3 chr10 5800028 5800340 -139788948 + AluSx SINE Alu 1 311 -1 279 143 0 0 chr10 5800565 5800607 -139788681 + MER57A LTR ERV1 295 336 -67 2481 156 34 5 chr10 5800663 5801079 -139788209 - MSTB1 LTR MaLR -1 431 4 2229 103 0 0 chr10 5801546 5801864 -139787424 + AluSx SINE Alu 1 318 0 1110 156 23 37 chr10 5802106 5802324 -139786964 - MER20 DNA MER1_type -4 215 1 2259 118 0 22 chr10 5802651 5802966 -139786322 + AluSx SINE Alu 1 308 -4 2309 86 0 13 chr10 5802974 5803277 -139786011 + AluSg SINE Alu 1 299 -11 26 30 0 0 chr10 5803550 5803583 -139785705 + AT_rich Low_complexity Low_complexity 1 33 0 1739 76 167 8 chr10 5803585 5803836 -139785452 + AluSg SINE Alu 1 291 -9 1506 161 95 0 chr10 5803847 5804120 -139785168 + AluJb SINE Alu 1 299 -13 2232 93 6 29 chr10 5804465 5804778 -139784510 + AluSc SINE Alu 4 309 0 2287 75 34 17 chr10 5804811 5805105 -139784183 + AluSg SINE Alu 1 299 -11 267 250 125 0 chr10 5805229 5805317 -139783971 - MER103 DNA DNA 0 166 68 324 300 119 92 chr10 5805317 5805423 -139783865 + L1ME LINE L1 5553 5655 -507 1871 158 49 0 chr10 5805423 5805707 -139783581 + AluJb SINE Alu 1 298 -14 2088 145 3 0 chr10 5805709 5806013 -139783275 + AluSx SINE Alu 1 305 -7 324 300 119 92 chr10 5806013 5806130 -139783158 + L1ME LINE L1 5655 5785 -377 2304 95 10 0 chr10 5806275 5806580 -139782708 - AluSp SINE Alu -4 309 2 393 279 71 63 chr10 5806721 5806975 -139782313 + HAL1 LINE L1 19 274 -2233 2247 100 7 0 chr10 5807224 5807515 -139781773 - AluSx SINE Alu -19 293 1 390 251 113 87 chr10 5807817 5808058 -139781230 - L1MC4a LINE L1 -317 5804 5600 2369 78 10 0 chr10 5808640 5808934 -139780354 - AluSx SINE Alu -15 297 1 1727 140 0 111 chr10 5808995 5809337 -139779951 - AluJo SINE Alu -8 304 1 323 207 0 0 chr10 5809413 5809471 -139779817 - MLT1H LTR MaLR 0 549 492 509 254 124 37 chr10 5809545 5809762 -139779526 - MLT1H LTR MaLR -205 344 109 956 169 0 0 chr10 5810380 5810540 -139778748 + FRAM SINE Alu 5 164 -12 358 223 109 63 chr10 5810540 5810715 -139778573 - MLT1J LTR MaLR -48 463 281 1111 88 0 0 chr10 5810742 5810878 -139778410 + AluSq/x SINE Alu 1 136 -177 2178 100 3 0 chr10 5810878 5811168 -139778120 + AluSp SINE Alu 1 291 -22 2409 187 53 22 chr10 5811283 5811865 -139777423 + Charlie1 DNA MER1_type 1945 2544 -217 1398 175 0 24 chr10 5811867 5812118 -139777170 + AluJb SINE Alu 53 297 -15 657 164 164 0 chr10 5812132 5812303 -139776985 + Charlie1 DNA MER1_type 2558 2756 -5 2275 118 0 3 chr10 5812769 5813073 -139776215 - AluSx SINE Alu -9 303 1 547 242 117 17 chr10 5813090 5813321 -139775967 - L1ME3A LINE L1 -109 6061 5808 708 273 24 0 chr10 5813344 5813509 -139775779 + MER58A DNA MER1_type 26 194 -30 2324 99 0 10 chr10 5813512 5813815 -139775473 - AluSx SINE Alu -12 300 1 1674 179 4 0 chr10 5814407 5814687 -139774601 + AluJo SINE Alu 6 286 -26 180 0 0 0 chr10 5814716 5814736 -139774552 + (T)n Simple_repeat Simple_repeat 1 20 0 282 178 27 27 chr10 5815048 5815121 -139774167 - L1ME1 LINE L1 -5 6161 6089 651 248 94 71 chr10 5815283 5815537 -139773751 - MIR SINE MIR 0 262 3 504 341 81 0 chr10 5815566 5815789 -139773499 - L3 LINE CR1 -309 1268 1028 949 143 0 0 chr10 5815794 5815927 -139773361 - AluSg/x SINE Alu -44 266 134 2262 65 29 0 chr10 5815929 5816208 -139773080 - AluSp SINE Alu -4 309 23 275 273 105 49 chr10 5819326 5819469 -139769819 - L2 LINE L2 -186 3086 2936 2359 106 0 0 chr10 5819652 5819955 -139769333 - AluSx SINE Alu -9 303 1 207 0 0 0 chr10 5820168 5820191 -139769097 + (TG)n Simple_repeat Simple_repeat 2 24 0 2105 102 15 52 chr10 5820201 5820526 -139768762 - AluSq SINE Alu 0 313 1 1729 162 45 3 chr10 5820573 5820863 -139768425 - AluJb SINE Alu -10 302 1 312 303 28 9 chr10 5821419 5821528 -139767760 + MLT1J1 LTR MaLR 226 336 -110 287 230 54 0 chr10 5821592 5821666 -139767622 + MLT1J1 LTR MaLR 364 441 -5 22 0 0 0 chr10 5821816 5821838 -139767450 + AT_rich Low_complexity Low_complexity 1 22 0 368 254 63 48 chr10 5822653 5822779 -139766509 - MIR3 SINE MIR -75 133 6 194 0 39 0 chr10 5823858 5823884 -139765404 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1903 126 3 18 chr10 5823886 5824171 -139765117 - AluSx SINE Alu -31 281 1 2160 92 23 10 chr10 5825283 5825588 -139763700 + AluSq SINE Alu 1 309 -4 1714 157 21 14 chr10 5825595 5825875 -139763413 + AluJo SINE Alu 1 282 -30 249 357 20 0 chr10 5825982 5826080 -139763208 - L2 LINE L2 -221 3051 2952 713 190 20 77 chr10 5826115 5826274 -139763014 - MER53 DNA DNA -5 184 36 2080 136 0 13 chr10 5826274 5826590 -139762698 - AluSx SINE Alu 0 312 1 713 190 20 77 chr10 5826590 5826625 -139762663 - MER53 DNA DNA -153 36 1 449 290 103 60 chr10 5826752 5827100 -139762188 - MLT1J2 LTR MaLR -24 426 64 2462 87 0 0 chr10 5827105 5827414 -139761874 + AluSg SINE Alu 1 309 -1 1545 163 22 22 chr10 5827522 5827642 -139761646 + AluJb SINE Alu 11 130 -182 2419 91 0 0 chr10 5827642 5827939 -139761349 + AluSx SINE Alu 1 297 -15 1545 163 22 22 chr10 5827939 5828095 -139761193 + AluJb SINE Alu 129 287 -25 2071 145 3 0 chr10 5828372 5828675 -139760613 + AluSx SINE Alu 1 304 -8 193 286 0 0 chr10 5828705 5828747 -139760541 - MIR SINE MIR -140 122 81 1192 139 6 0 chr10 5829265 5829438 -139759850 + AluJo SINE Alu 1 174 -138 1719 93 0 9 chr10 5829667 5829893 -139759395 + AluSq SINE Alu 74 297 -16 1735 106 75 4 chr10 5830001 5830256 -139759032 - AluSx SINE Alu -35 277 5 2144 85 14 7 chr10 5830624 5830930 -139758358 + AluY SINE Alu 1 308 0 4301 205 105 20 chr10 5832306 5833420 -139755868 + L1MC4 LINE L1 6469 7677 -365 470 199 316 7 chr10 5833451 5833672 -139755616 + L1MC4 LINE L1 7763 7995 0 2183 119 3 0 chr10 5838492 5838786 -139750502 - AluSx SINE Alu -17 295 1 1533 119 14 0 chr10 5839359 5839578 -139749710 + AluSx SINE Alu 5 226 -86 2004 122 0 4 chr10 5839680 5839959 -139749329 + AluSq SINE Alu 1 278 -35 270 0 0 0 chr10 5839960 5839990 -139749298 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 578 269 75 21 chr10 5840732 5840918 -139748370 + MIR SINE MIR 41 236 -26 21 36 0 0 chr10 5841327 5841355 -139747933 + AT_rich Low_complexity Low_complexity 1 28 0 292 325 35 9 chr10 5842353 5842467 -139746821 - MIR3 SINE MIR -45 163 47 302 254 5 42 chr10 5843050 5843150 -139746138 + MER5A DNA MER1_type 13 98 -80 386 228 8 63 chr10 5843192 5843319 -139745969 - MIR SINE MIR -141 121 2 185 250 42 0 chr10 5845039 5845087 -139744201 - L2 LINE L2 -80 3233 3184 2107 105 0 28 chr10 5847018 5847327 -139741961 + AluSc SINE Alu 1 301 0 1394 119 0 99 chr10 5847729 5847852 -139741436 + AluJb SINE Alu 1 88 -224 2370 75 3 0 chr10 5847852 5848145 -139741143 - AluSg SINE Alu -16 294 1 1394 119 0 99 chr10 5848145 5848274 -139741014 + AluJb SINE Alu 88 228 -84 1401 169 139 4 chr10 5849290 5849556 -139739732 + AluJo SINE Alu 1 302 0 599 279 107 30 chr10 5850698 5850768 -139738520 - MER112 DNA MER1_type -9 251 188 2023 125 31 0 chr10 5850768 5851057 -139738231 - AluSx SINE Alu -14 298 1 599 279 107 30 chr10 5851057 5851219 -139738069 - MER112 DNA MER1_type -72 188 1 1525 154 85 24 chr10 5851445 5851738 -139737550 + AluJo SINE Alu 1 311 -1 513 271 8 0 chr10 5851841 5851963 -139737325 - MER58B DNA MER1_type -3 338 216 181 180 20 80 chr10 5852665 5852715 -139736573 - MER5A DNA MER1_type -125 64 18 1853 153 11 3 chr10 5852754 5853036 -139736252 - AluSx SINE Alu -28 284 1 832 150 8 0 chr10 5854730 5854863 -139734425 - AluJb SINE Alu -177 135 2 2109 119 3 0 chr10 5854909 5855216 -139734072 - AluSx SINE Alu 0 312 1 222 229 193 0 chr10 5855409 5855492 -139733796 + MIR SINE MIR 78 176 -86 1860 104 93 11 chr10 5855648 5855927 -139733361 - AluSc SINE Alu -7 302 1 1774 161 13 10 chr10 5856044 5856343 -139732945 - AluJb SINE Alu -12 300 1 294 241 76 0 chr10 5856354 5856433 -139732855 - L2 LINE L2 0 3313 3229 23 33 0 0 chr10 5856442 5856472 -139732816 + AT_rich Low_complexity Low_complexity 1 30 0 397 160 126 50 chr10 5856587 5856706 -139732582 - MER106A DNA MER1_type -1 235 108 413 287 10 0 chr10 5856891 5856992 -139732296 - L2 LINE L2 -954 2360 2259 290 313 47 7 chr10 5857000 5857150 -139732138 - L2 LINE L2 -1261 2053 1898 1552 177 0 53 chr10 5858493 5858798 -139730490 - AluJo SINE Alu -23 289 6 2435 76 26 0 chr10 5858862 5859165 -139730123 - AluY SINE Alu 0 311 1 1608 111 37 27 chr10 5859165 5859525 -139729763 + Tigger7 DNA MER2_type 180 2573 -14 27 0 0 0 chr10 5859534 5859561 -139729727 + AT_rich Low_complexity Low_complexity 1 27 0 347 138 11 0 chr10 5859586 5859673 -139729615 + (TA)n Simple_repeat Simple_repeat 2 89 0 26 64 0 0 chr10 5859691 5859738 -139729550 + AT_rich Low_complexity Low_complexity 1 47 0 2511 58 0 16 chr10 5860928 5861239 -139728049 + AluY SINE Alu 2 307 -4 2101 136 0 0 chr10 5861452 5861753 -139727535 - AluSx SINE Alu -10 302 2 1709 225 204 14 chr10 5861764 5862005 -139727283 - L1MD3 LINE L1 0 8037 7843 2040 146 0 3 chr10 5862005 5862307 -139726981 - AluJb SINE Alu -11 301 1 1709 225 204 14 chr10 5862307 5862870 -139726418 - L1MD3 LINE L1 -194 7843 7079 2292 107 3 7 chr10 5864837 5865145 -139724143 + AluSc SINE Alu 1 307 -2 2311 77 0 42 chr10 5865700 5866013 -139723275 - AluSq SINE Alu -13 300 1 23 0 0 0 chr10 5866070 5866093 -139723195 + AT_rich Low_complexity Low_complexity 1 23 0 180 347 41 41 chr10 5866863 5866961 -139722327 - L2 LINE L2 -652 2662 2565 237 167 0 0 chr10 5867533 5867587 -139721701 + (TA)n Simple_repeat Simple_repeat 2 55 0 1568 156 0 0 chr10 5867609 5867846 -139721442 - AluSx SINE Alu -75 237 1 310 198 62 0 chr10 5868062 5868143 -139721145 + L1MB8 LINE L1 5606 5691 -493 746 161 1 10 chr10 5868250 5868400 -139720888 + L1P3 LINE L1 5668 5805 -349 1540 172 36 45 chr10 5868401 5868669 -139720619 + MER7A DNA MER2_type 21 285 -2753 2005 128 0 24 chr10 5868669 5868966 -139720322 + AluSc SINE Alu 1 290 -19 1540 172 36 45 chr10 5868966 5869028 -139720260 + MER7A DNA MER2_type 285 346 0 1454 157 113 18 chr10 5869028 5869365 -139719923 + L1MB8 LINE L1 5800 6168 -10 21 0 0 0 chr10 5869367 5869388 -139719900 + AT_rich Low_complexity Low_complexity 1 21 0 414 235 114 8 chr10 5869815 5869947 -139719341 - MIR SINE MIR -12 250 105 886 130 0 71 chr10 5870540 5870694 -139718594 - FLAM_C SINE Alu 0 143 1 1618 212 0 0 chr10 5875608 5875919 -139713369 + AluJb SINE Alu 1 311 -1 620 152 18 30 chr10 5875919 5876084 -139713204 + GA-rich Low_complexity Low_complexity 1 163 0 254 259 12 25 chr10 5876732 5876813 -139712475 + MLT1L LTR MaLR 7 86 -529 441 0 0 0 chr10 5876834 5876883 -139712405 + (TG)n Simple_repeat Simple_repeat 1 49 0 508 235 29 7 chr10 5876950 5877086 -139712202 + MLT1L LTR MaLR 129 267 -348 336 228 142 16 chr10 5877179 5877306 -139711982 + MLT1L LTR MaLR 432 574 -41 2081 132 0 3 chr10 5877583 5877878 -139711410 - AluSx SINE Alu -18 294 1 231 232 29 0 chr10 5878087 5878156 -139711132 - HAL1 LINE L1 -585 1922 1852 2551 200 130 33 chr10 5878204 5879601 -139709687 + L1ME2 LINE L1 4567 6155 -9 774 347 99 62 chr10 5879785 5880356 -139708932 + L1M4 LINE L1 2933 3481 -2665 2037 120 0 10 chr10 5880356 5880655 -139708633 - AluSx SINE Alu -11 301 6 774 347 99 62 chr10 5880655 5880914 -139708374 + L1M4 LINE L1 3481 3729 -2417 2570 39 10 0 chr10 5880914 5881221 -139708067 + AluY SINE Alu 1 310 -1 774 347 99 62 chr10 5881221 5881556 -139707732 + L1M4 LINE L1 3729 4143 -2003 285 258 92 62 chr10 5881578 5881818 -139707470 - HAL1b LINE L1 -702 646 400 234 221 163 12 chr10 5881851 5881937 -139707351 - HAL1b LINE L1 -1026 322 224 234 0 0 0 chr10 5882054 5882080 -139707208 + (A)n Simple_repeat Simple_repeat 1 26 0 9143 150 36 24 chr10 5882090 5883871 -139705417 + L1MA4 LINE L1 3472 5321 -979 234 62 0 0 chr10 5883871 5883903 -139705385 + (CAAG)n Simple_repeat Simple_repeat 3 34 0 9143 150 36 24 chr10 5883903 5884893 -139704395 + L1MA4 LINE L1 5321 6298 -2 3463 174 20 36 chr10 5885187 5885936 -139703352 - L1MB8 LINE L1 0 6178 5442 22 35 0 0 chr10 5885936 5885965 -139703323 + AT_rich Low_complexity Low_complexity 1 29 0 793 206 35 0 chr10 5885996 5886166 -139703122 - MER58A DNA MER1_type -4 220 45 510 272 70 62 chr10 5886289 5886642 -139702646 - MLT1H LTR MaLR -4 545 72 590 136 9 9 chr10 5886688 5886798 -139702490 + L1MB7 LINE L1 6058 6167 -17 1447 282 148 42 chr10 5887590 5888061 -139701227 - HAL1 LINE L1 -1139 1368 948 1867 159 10 3 chr10 5888061 5888357 -139700931 + AluJo SINE Alu 1 298 -14 1447 282 148 42 chr10 5888357 5889064 -139700224 - HAL1 LINE L1 -1559 948 66 373 257 50 40 chr10 5889469 5889570 -139699718 + L2 LINE L2 3171 3272 0 412 297 62 15 chr10 5889587 5889860 -139699428 + L1MC/D LINE L1 3587 3872 -2274 531 234 131 11 chr10 5890190 5890365 -139698923 + L2 LINE L2 3118 3313 0 447 354 103 37 chr10 5890377 5890899 -139698389 + L2 LINE L2 2713 3263 -9 21 0 0 0 chr10 5891921 5891942 -139697346 + GC_rich Low_complexity Low_complexity 1 21 0 1660 145 104 0 chr10 5892551 5892820 -139696468 - AluSx SINE Alu -15 297 1 2325 87 3 3 chr10 5893507 5893805 -139695483 - AluSc SINE Alu -11 298 1 377 279 113 30 chr10 5894463 5894792 -139694496 + L1ME3A LINE L1 3135 3501 -2645 261 236 0 42 chr10 5894839 5894911 -139694377 + L1ME3A LINE L1 5446 5514 -2294 23 54 0 0 chr10 5894959 5894996 -139694292 + AT_rich Low_complexity Low_complexity 1 37 0 2371 81 0 0 chr10 5895101 5895396 -139693892 - AluSg SINE Alu -15 295 1 543 299 45 7 chr10 5895432 5895686 -139693602 + L1M1 LINE L1 2720 3055 -4596 1619 180 14 0 chr10 5895713 5895991 -139693297 - AluJo SINE Alu -30 282 1 2145 166 127 50 chr10 5895992 5896202 -139693086 + Charlie1 DNA MER1_type 2049 2241 -520 1563 156 20 60 chr10 5896202 5896503 -139692785 + AluJo SINE Alu 24 312 0 2145 166 127 50 chr10 5896503 5896894 -139692394 + Charlie1 DNA MER1_type 2241 2708 -53 1995 130 7 0 chr10 5896894 5897178 -139692110 - AluSx SINE Alu -26 286 1 2145 166 127 50 chr10 5897178 5897236 -139692052 + Charlie1 DNA MER1_type 2708 2760 -1 315 242 94 8 chr10 5897237 5897365 -139691923 + L1ME3A LINE L1 5825 5963 -207 320 266 121 35 chr10 5897624 5897823 -139691465 + L1MC/D LINE L1 4485 4700 -1446 401 300 147 56 chr10 5897868 5898311 -139690977 + L1MC/D LINE L1 5311 5793 -2015 318 327 132 69 chr10 5899379 5899902 -139689386 + L1M2 LINE L1 784 1339 -5510 3716 118 92 18 chr10 5900443 5901174 -139688114 - Tigger3(Golem) DNA MER2_type -2 3027 2243 1181 179 19 0 chr10 5901209 5901416 -139687872 - Tigger3(Golem) DNA MER2_type -2818 211 1 549 316 81 42 chr10 5901487 5901917 -139687371 - L2 LINE L2 0 3313 2867 896 232 127 81 chr10 5901919 5902424 -139686864 - L1ME3A LINE L1 -15 6155 5628 367 209 234 13 chr10 5902860 5903018 -139686270 - L1ME3A LINE L1 -551 5611 5419 2114 109 0 39 chr10 5903065 5903376 -139685912 - AluSq SINE Alu -14 299 1 2942 212 82 45 chr10 5903379 5904556 -139684732 - L1ME3A LINE L1 -1468 4678 3458 745 231 21 0 chr10 5904580 5904868 -139684420 + L1M4b LINE L1 1140 1507 -5352 184 167 119 24 chr10 5904939 5904981 -139684307 + MIR3 SINE MIR 109 154 -54 339 221 38 84 chr10 5905055 5905186 -139684102 - HAL1 LINE L1 -37 2470 2346 812 118 0 9 chr10 5905248 5905358 -139683930 - FLAM_C SINE Alu -25 118 10 306 278 119 16 chr10 5905365 5905491 -139683797 - HAL1 LINE L1 -200 2307 2169 192 97 0 0 chr10 5905614 5905645 -139683643 + (CA)n Simple_repeat Simple_repeat 1 31 0 834 265 92 12 chr10 5905908 5906233 -139683055 + LTR16B LTR ERVL 114 464 0 270 313 23 16 chr10 5906239 5906367 -139682921 + HERV16 LTR ERVL 6 134 -4862 344 337 35 25 chr10 5907172 5907457 -139681831 + HERV16 LTR ERVL 4709 4996 0 1053 298 59 11 chr10 5907457 5907900 -139681388 + LTR16B LTR ERVL 1 464 0 210 288 50 0 chr10 5907942 5908022 -139681266 + MER5A DNA MER1_type 8 91 -98 1727 145 0 0 chr10 5908024 5908273 -139681015 - AluSx SINE Alu -14 298 50 761 167 18 18 chr10 5908482 5908650 -139680638 + L1 LINE L1 4549 4716 -1430 1769 144 0 62 chr10 5908652 5908957 -139680331 + AluJb SINE Alu 14 299 -13 2100 113 50 0 chr10 5908959 5909242 -139680046 + AluSc SINE Alu 1 297 -12 648 156 16 0 chr10 5909242 5909370 -139679918 + L1MA5 LINE L1 6171 6300 0 193 40 0 0 chr10 5909538 5909563 -139679725 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 959 58 0 17 chr10 5909563 5909673 -139679615 - AluY SINE Alu -31 280 171 910 280 8 23 chr10 5909723 5909980 -139679308 + MIR SINE MIR 4 256 -6 587 192 111 39 chr10 5910001 5910229 -139679059 + L1MC5 LINE L1 7259 7415 -393 991 177 18 31 chr10 5910230 5910309 -139678979 + FAM SINE Alu 1 4294967214 -267 1819 98 206 46 chr10 5910309 5910630 -139678658 + MSTA LTR MaLR 1 390 -38 2447 63 0 35 chr10 5910630 5910945 -139678343 - AluY SINE Alu -7 304 1 1819 98 206 46 chr10 5910945 5910992 -139678296 + MSTA LTR MaLR 390 428 0 991 177 18 31 chr10 5910992 5911124 -139678164 + FAM SINE Alu -83 49 0 548 219 26 0 chr10 5911159 5911310 -139677978 + L1M4 LINE L1 2231 2385 -3761 26 93 0 0 chr10 5911315 5911390 -139677898 + AT_rich Low_complexity Low_complexity 1 75 0 1892 249 38 16 chr10 5911407 5912037 -139677251 + L1M4 LINE L1 2371 3014 -3132 291 287 59 20 chr10 5912054 5912155 -139677133 - MLT2F LTR ERVL -284 379 275 3936 276 100 52 chr10 5912199 5912849 -139676439 - ERVL LTR ERVL -2715 3049 2432 2338 83 0 0 chr10 5912849 5913138 -139676150 - AluSc SINE Alu 0 309 21 3936 276 100 52 chr10 5913138 5914165 -139675123 - ERVL LTR ERVL -3332 2432 1291 921 310 28 32 chr10 5914272 5914965 -139674323 - ERVL LTR ERVL -4646 1118 352 605 154 106 24 chr10 5915096 5915219 -139674069 - FLAM_A SINE Alu 0 133 1 1350 149 0 14 chr10 5915807 5916021 -139673267 + AluSg/x SINE Alu 94 304 -8 183 222 0 0 chr10 5916556 5916601 -139672687 + (CATA)n Simple_repeat Simple_repeat 4 48 0 25 0 0 0 chr10 5917175 5917200 -139672088 + AT_rich Low_complexity Low_complexity 1 25 0 240 195 35 46 chr10 5917998 5918085 -139671203 + (CCCGG)n Simple_repeat Simple_repeat 5 90 0 2264 122 0 0 chr10 5919428 5919731 -139669557 + AluSq SINE Alu 7 309 -4 1154 126 0 0 chr10 5919731 5919919 -139669369 + AluSg/x SINE Alu 132 319 0 463 281 96 45 chr10 5919922 5920214 -139669074 - HAL1 LINE L1 -218 2289 1983 213 277 0 15 chr10 5921335 5921400 -139667888 + CT-rich Low_complexity Low_complexity 4 67 0 233 304 39 20 chr10 5921789 5921891 -139667397 - HAL1 LINE L1 -2369 138 35 324 158 0 0 chr10 5921990 5922047 -139667241 + C-rich Low_complexity Low_complexity 5 61 0 2120 96 3 41 chr10 5922051 5922342 -139666946 - AluSx SINE Alu -32 280 1 2142 116 10 13 chr10 5922781 5923092 -139666196 + AluJb SINE Alu 1 310 -2 237 211 0 0 chr10 5923564 5923616 -139665672 + MER63 DNA MER1_type 696 747 -315 4111 148 81 44 chr10 5925915 5926207 -139663081 - L1MB2 LINE L1 -2 6169 5889 1415 134 181 0 chr10 5926207 5926461 -139662827 - AluSg SINE Alu 0 300 1 4111 148 81 44 chr10 5926461 5926473 -139662815 - L1MB2 LINE L1 -282 5889 5879 2089 113 3 36 chr10 5926473 5926782 -139662506 - AluSx SINE Alu -13 299 1 4111 148 81 44 chr10 5926782 5927449 -139661839 - L1MB2 LINE L1 -292 5879 5157 1256 268 51 3 chr10 5927613 5927964 -139661324 - MER87 LTR ERV1 0 541 174 2364 77 0 3 chr10 5928093 5928380 -139660908 - AluSg SINE Alu -14 296 11 203 234 11 117 chr10 5928422 5928516 -139660772 - L2 LINE L2 0 3272 3189 528 276 81 57 chr10 5929170 5929416 -139659872 - MIR SINE MIR -3 259 8 2227 109 0 16 chr10 5929529 5929833 -139659455 - AluSq SINE Alu -14 299 1 192 77 0 0 chr10 5930487 5930513 -139658775 + (A)n Simple_repeat Simple_repeat 1 26 0 1129 210 12 12 chr10 5930515 5930666 -139658622 + L1 LINE L1 4015 4169 -1977 2309 96 0 0 chr10 5930666 5930990 -139658298 + AluSx SINE Alu 1 324 0 1129 210 12 12 chr10 5930990 5931080 -139658208 + L1 LINE L1 4168 4257 -1889 289 318 132 21 chr10 5932137 5932326 -139656962 + MER63A DNA MER1_type 1 210 0 324 0 0 0 chr10 5932585 5932621 -139656667 + (TG)n Simple_repeat Simple_repeat 1 36 0 2199 134 3 0 chr10 5932725 5933030 -139656258 - AluJb SINE Alu -6 306 1 2160 112 7 17 chr10 5934923 5935219 -139654069 + AluSx SINE Alu 1 293 -19 325 335 0 0 chr10 5936158 5936337 -139652951 + (CGTG)n Simple_repeat Simple_repeat 1 179 0 338 335 0 0 chr10 5936509 5936688 -139652600 + (CGTG)n Simple_repeat Simple_repeat 1 179 0 302 328 0 0 chr10 5936614 5936785 -139652503 + (TG)n Simple_repeat Simple_repeat 2 172 0 * 712 176 8 0 chr10 5937494 5937625 -139651663 + FLAM_C SINE Alu 2 133 -10 358 278 51 77 chr10 5938018 5938291 -139650997 - MLT1K LTR MaLR 0 588 323 68 24 0 0 chr10 5939430 5939512 -139649776 + AT_rich Low_complexity Low_complexity 1 82 0 237 109 47 31 chr10 5939750 5939814 -139649474 + (TCTCTG)n Simple_repeat Simple_repeat 2 66 0 2285 122 0 0 chr10 5939913 5940216 -139649072 - AluSx SINE Alu -9 303 1 1740 159 7 11 chr10 5940262 5940539 -139648749 - AluJb SINE Alu -36 276 1 1750 100 8 8 chr10 5941859 5942098 -139647190 + AluSx SINE Alu 55 293 -19 27 0 0 0 chr10 5942154 5942181 -139647107 + AT_rich Low_complexity Low_complexity 1 27 0 2184 97 0 72 chr10 5943355 5943675 -139645613 + AluSx SINE Alu 6 302 -10 428 103 0 0 chr10 5945306 5945364 -139643924 + AluSq/x SINE Alu 62 119 -193 2469 70 0 19 chr10 5946323 5946635 -139642653 - AluY SINE Alu -5 306 1 1958 163 7 0 chr10 5946682 5946982 -139642306 + AluSx SINE Alu 1 302 -10 452 287 61 57 chr10 5947169 5947256 -139642032 + L1ME3A LINE L1 5209 5294 -876 722 172 31 0 chr10 5947256 5947384 -139641904 + FLAM_C SINE Alu 1 132 -1 452 287 61 57 chr10 5947384 5947998 -139641290 + L1ME3A LINE L1 5294 5928 -242 967 98 0 0 chr10 5948154 5948287 -139641001 + FLAM_C SINE Alu 1 133 0 1377 177 58 50 chr10 5949990 5950145 -139639143 + MLT1A1 LTR MaLR 1 153 -212 2126 130 3 0 chr10 5950145 5950438 -139638850 + AluSq SINE Alu 1 294 -19 1377 177 58 50 chr10 5950438 5950604 -139638684 + MLT1A1 LTR MaLR 153 328 -37 1508 182 91 0 chr10 5950604 5950879 -139638409 - AluJo SINE Alu -12 300 1 1377 177 58 50 chr10 5950879 5950918 -139638370 + MLT1A1 LTR MaLR 328 365 0 358 177 54 11 chr10 5952837 5952939 -139636349 + (TCTA)n Simple_repeat Simple_repeat 1 97 -480 1886 170 0 0 chr10 5952939 5953227 -139636061 - 7SLRNA srpRNA srpRNA -12 308 21 358 177 54 11 chr10 5953227 5953391 -139635897 + (TCTA)n Simple_repeat Simple_repeat 97 577 0 1603 180 44 39 chr10 5954096 5954484 -139634804 - MLT1B LTR MaLR 0 390 1 214 250 0 59 chr10 5954627 5954695 -139634593 - MER91 DNA MER1_type 0 140 77 297 0 0 0 chr10 5954907 5954940 -139634348 + (T)n Simple_repeat Simple_repeat 1 33 0 743 273 83 5 chr10 5954985 5955190 -139634098 - MER58A DNA MER1_type 0 224 4 345 240 0 13 chr10 5955246 5955321 -139633967 - MLT1J LTR MaLR -202 309 236 1405 244 35 32 chr10 5956532 5956905 -139632383 + MLT1B LTR MaLR 1 374 -16 1766 187 3 7 chr10 5956992 5957291 -139631997 - AluJo SINE Alu -13 299 2 2610 50 0 3 chr10 5957387 5957688 -139631600 + AluY SINE Alu 1 300 -11 262 355 24 30 chr10 5957947 5958113 -139631175 + L2 LINE L2 3102 3266 -6 1844 152 0 49 chr10 5958890 5959218 -139630070 - AluJo SINE Alu 0 312 1 528 99 0 12 chr10 5959410 5959491 -139629797 - MADE1 DNA Mariner 0 80 1 186 347 67 0 chr10 5959797 5959872 -139629416 - MIR SINE MIR -99 163 84 229 250 49 107 chr10 5960184 5960289 -139628999 + ORSL DNA AcHobo 32 142 -133 24 0 0 0 chr10 5960289 5960313 -139628975 + AT_rich Low_complexity Low_complexity 1 24 0 229 250 49 107 chr10 5960313 5960331 -139628957 + ORSL DNA AcHobo 142 159 -116 2307 78 0 14 chr10 5960331 5960626 -139628662 + AluSc SINE Alu 1 291 -18 229 250 49 107 chr10 5960626 5960702 -139628586 + ORSL DNA AcHobo 159 242 -33 1319 148 0 37 chr10 5960854 5961070 -139628218 - AluJb SINE Alu -19 293 86 23 0 0 0 chr10 5961674 5961697 -139627591 + AT_rich Low_complexity Low_complexity 1 23 0 1551 148 41 10 chr10 5961700 5961991 -139627297 - L1MA9 LINE L1 -1 6311 6012 1127 122 0 12 chr10 5962070 5962234 -139627054 - AluJb SINE Alu -13 299 138 224 286 0 14 chr10 5962739 5962809 -139626479 + MIR SINE MIR 54 122 -86 1881 148 7 0 chr10 5962839 5963137 -139626151 - AluSx SINE Alu -12 300 1 201 196 22 0 chr10 5965286 5965332 -139623956 + (TTCA)n Simple_repeat Simple_repeat 3 49 0 259 264 50 25 chr10 5965871 5965992 -139623296 + MIR SINE MIR 59 182 -80 338 353 44 0 chr10 5966147 5966283 -139623005 - MIR SINE MIR -115 147 6 360 242 0 0 chr10 5966755 5966850 -139622438 + (CCTG)n Simple_repeat Simple_repeat 3 97 0 197 370 14 0 chr10 5968552 5968625 -139620663 - MIR SINE MIR -20 242 169 230 263 158 0 chr10 5968888 5968983 -139620305 + MIR SINE MIR 140 249 -13 318 50 0 0 chr10 5969358 5969398 -139619890 + (GGAA)n Simple_repeat Simple_repeat 3 42 0 2270 93 3 0 chr10 5969398 5969708 -139619580 + AluSx SINE Alu 2 312 0 2229 98 10 0 chr10 5971083 5971388 -139617900 - AluSx SINE Alu -4 308 1 273 302 85 48 chr10 5971557 5971582 -139617706 + L2 LINE L2 3077 3100 -172 1684 145 3 63 chr10 5971582 5971914 -139617374 - AluJb SINE Alu 0 312 1 273 302 85 48 chr10 5971914 5972077 -139617211 + L2 LINE L2 3100 3272 0 2253 100 0 0 chr10 5972766 5973065 -139616223 + AluSc SINE Alu 1 299 -10 968 106 17 22 chr10 5973846 5974026 -139615262 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 228 185 0 65 chr10 5974026 5974118 -139615170 + CT-rich Low_complexity Low_complexity 2 87 0 190 224 336 9 chr10 5975190 5975297 -139613991 + MIR3 SINE MIR 35 176 -32 1680 150 11 0 chr10 5976900 5977166 -139612122 + AluJo SINE Alu 1 269 -43 335 77 0 19 chr10 5977212 5977264 -139612024 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 274 331 69 25 chr10 5978270 5978430 -139610858 - MIR3 SINE MIR -22 186 20 1023 134 12 0 chr10 5978762 5978926 -139610362 + FRAM SINE Alu 1 158 -18 718 80 0 18 chr10 5979623 5979736 -139609552 + (TTCC)n Simple_repeat Simple_repeat 2 112 0 807 176 0 0 chr10 5979781 5979917 -139609371 - AluJ SINE Alu -44 268 133 241 307 13 0 chr10 5980433 5980508 -139608780 - L1ME3A LINE L1 -27 6143 6068 301 255 36 0 chr10 5980540 5980667 -139608621 - L1ME3 LINE L1 -169 5995 5862 1358 206 33 30 chr10 5980985 5981349 -139607939 + MLT1A1 LTR MaLR 1 365 0 735 146 0 24 chr10 5981754 5981877 -139607411 - AluJ SINE Alu -177 135 16 1552 172 32 0 chr10 5983192 5983471 -139605817 - AluJo SINE Alu -24 288 1 266 250 22 33 chr10 5983761 5983853 -139605435 + CT-rich Low_complexity Low_complexity 6 96 0 2317 211 56 36 chr10 5984363 5984733 -139604555 + L1ME2 LINE L1 5453 5843 -321 1951 133 3 0 chr10 5984733 5985027 -139604261 + AluSq SINE Alu 1 295 -18 2317 211 56 36 chr10 5985027 5985299 -139603989 + L1ME2 LINE L1 5843 6108 -56 29 28 0 0 chr10 5985299 5985335 -139603953 + AT_rich Low_complexity Low_complexity 1 36 0 10369 90 69 4 chr10 5985335 5986976 -139602312 - L1PBa LINE L1 -3802 3060 1311 373 169 0 0 chr10 5986979 5987038 -139602250 - L1PBa LINE L1 -5705 1158 1100 21 57 0 0 chr10 5987075 5987110 -139602178 + AT_rich Low_complexity Low_complexity 1 35 0 2092 130 0 3 chr10 5987450 5987757 -139601531 - AluSx SINE Alu -6 306 1 2170 95 17 0 chr10 5988246 5988541 -139600747 - AluSx SINE Alu -7 305 6 2053 114 3 10 chr10 5989306 5989603 -139599685 + AluSq SINE Alu 5 299 -14 541 176 231 0 chr10 5990270 5990378 -139598910 - FLAM_C SINE Alu 0 133 1 339 118 88 137 chr10 5990526 5990574 -139598714 + Tigger2 DNA MER2_type 1 43 -2675 1347 130 74 9 chr10 5990574 5990790 -139598498 + MER30 DNA MER1_type 1 230 0 339 118 88 137 chr10 5990790 5990843 -139598445 + Tigger2 DNA MER2_type 43 97 -2621 1925 127 3 20 chr10 5990846 5991146 -139598142 - AluSx SINE Alu -17 295 1 1590 151 52 17 chr10 5991188 5991479 -139597809 - AluJo SINE Alu -11 301 1 849 211 0 61 chr10 5991485 5991665 -139597623 - FAM SINE Alu -6 169 1 3530 132 78 8 chr10 5991665 5992277 -139597011 + Tigger2 DNA MER2_type 90 744 -1974 883 144 25 80 chr10 5992343 5992441 -139596847 + Tigger2 DNA MER2_type 2461 2544 -174 1959 136 0 7 chr10 5992441 5992742 -139596546 + AluSq SINE Alu 1 299 -14 883 144 25 80 chr10 5992742 5992844 -139596444 + Tigger2 DNA MER2_type 2544 2650 -68 640 159 9 0 chr10 5992846 5992953 -139596335 - Tigger1 DNA MER2_type -734 1684 1577 691 193 0 30 chr10 5992953 5993088 -139596200 + FLAM_C SINE Alu 1 131 -2 1147 176 36 40 chr10 5993126 5993376 -139595912 + AluJo SINE Alu 38 286 -26 464 298 105 34 chr10 5993718 5993956 -139595332 + MIR SINE MIR 7 261 -1 583 222 0 17 chr10 5994039 5994156 -139595132 + L2 LINE L2 3192 3306 -7 1471 152 50 21 chr10 5994495 5994778 -139594510 - AluJb SINE Alu -21 291 1 699 168 0 9 chr10 5995005 5995118 -139594170 + FLAM_C SINE Alu 2 113 -30 391 283 65 14 chr10 5995685 5995823 -139593465 - L2 LINE L2 -6 3266 3122 408 372 5 16 chr10 5995896 5996084 -139593204 - MIR SINE MIR -69 193 8 1926 125 3 0 chr10 5996112 5996400 -139592888 + AluJb SINE Alu 2 290 -22 555 235 62 0 chr10 5997400 5997562 -139591726 + L1ME LINE L1 5177 5348 -798 598 144 161 34 chr10 5997619 5997737 -139591551 - FLAM_C SINE Alu 0 133 1 1161 228 172 3 chr10 5997759 5998114 -139591174 + L1ME LINE L1 5386 5800 -370 494 296 123 0 chr10 5998125 5998287 -139591001 + MER5A DNA MER1_type 3 184 -5 254 174 43 0 chr10 5998295 5998341 -139590947 + MER5A DNA MER1_type 2 49 -140 1421 170 4 18 chr10 5998352 5998629 -139590659 + AluJb SINE Alu 9 281 -31 707 205 24 0 chr10 5998661 5998788 -139590500 + MER5A DNA MER1_type 56 185 -4 253 161 214 0 chr10 5998793 5998849 -139590439 - MER5A DNA MER1_type -114 75 8 2280 92 3 0 chr10 5998896 5999201 -139590087 + AluSx SINE Alu 1 306 -6 739 192 58 12 chr10 5999812 5999984 -139589304 - L1MA10 LINE L1 -11 6323 6144 2037 135 0 3 chr10 6000132 6000436 -139588852 + AluSx SINE Alu 1 303 -9 1651 154 26 7 chr10 6000522 6000827 -139588461 + AluSx SINE Alu 1 311 -1 1648 173 16 7 chr10 6000888 6001194 -139588094 + AluJo SINE Alu 3 311 -1 1941 152 0 0 chr10 6001199 6001508 -139587780 + AluSx SINE Alu 4 312 0 247 230 292 6 chr10 6001527 6001688 -139587600 + L1MC4 LINE L1 7689 7895 -147 1493 178 176 69 chr10 6002721 6002771 -139586517 + Charlie1a DNA MER1_type 65 108 -2653 2101 108 7 7 chr10 6002771 6003077 -139586211 - AluSq SINE Alu -7 306 1 1493 178 176 69 chr10 6003077 6003222 -139586066 + Charlie1a DNA MER1_type 108 236 -2525 1857 140 3 3 chr10 6003222 6003515 -139585773 + AluSp SINE Alu 5 297 -16 1493 178 176 69 chr10 6003515 6003553 -139585735 + Charlie1a DNA MER1_type 236 269 -2492 1646 171 11 0 chr10 6003553 6003840 -139585448 + AluSx SINE Alu 1 290 -22 1493 178 176 69 chr10 6003840 6004143 -139585145 + Charlie1a DNA MER1_type 269 661 -794 2157 91 0 0 chr10 6004143 6004428 -139584860 + AluSc SINE Alu 1 285 -24 291 93 0 0 chr10 6004544 6004587 -139584701 + (TA)n Simple_repeat Simple_repeat 2 44 0 1008 235 81 59 chr10 6004587 6004669 -139584619 + L1ME2 LINE L1 5685 5764 -400 1863 152 0 26 chr10 6004669 6004971 -139584317 - AluSx SINE Alu -18 294 1 1008 235 81 59 chr10 6004971 6005296 -139583992 + L1ME2 LINE L1 5764 6101 -63 270 216 69 78 chr10 6005344 6005446 -139583842 - HsTC2 DNA Tc2 -2 1896 1796 1940 138 10 0 chr10 6006560 6006851 -139582437 + AluSx SINE Alu 1 294 -18 450 258 113 32 chr10 6006857 6007043 -139582245 - LTR33A LTR ERVL -26 497 297 581 188 257 10 chr10 6007590 6007640 -139581648 + MER69 DNA AcHobo 2183 2219 -307 1674 160 0 53 chr10 6007640 6007960 -139581328 + AluSx SINE Alu 1 304 0 581 188 257 10 chr10 6007960 6008110 -139581178 + MER69 DNA AcHobo 2219 2434 -92 3531 225 47 77 chr10 6008281 6009475 -139579813 - L1MCc LINE L1 -2898 4043 2989 2025 151 0 0 chr10 6009475 6009787 -139579501 - AluSx SINE Alu 0 312 1 3531 225 47 77 chr10 6009787 6011009 -139578279 - L1MCc LINE L1 -3952 2989 1732 369 167 154 0 chr10 6011025 6011103 -139578185 - MLT1B LTR MaLR -300 90 1 511 248 76 0 chr10 6011107 6011430 -139577858 - L1MCc LINE L1 -4851 1571 1198 865 209 6 17 chr10 6011438 6011610 -139577678 + MER45A DNA AcHobo 1 170 -8 827 126 0 15 chr10 6012330 6012465 -139576823 + FLAM_C SINE Alu 1 133 0 751 266 55 44 chr10 6012489 6012764 -139576524 - MLT1J LTR MaLR -34 477 200 695 163 8 16 chr10 6012962 6013085 -139576203 + FLAM_C SINE Alu 2 123 -10 22 35 0 0 chr10 6013343 6013372 -139575916 + AT_rich Low_complexity Low_complexity 1 29 0 2222 113 0 0 chr10 6013475 6013785 -139575503 + AluSx SINE Alu 1 310 0 6021 52 1 1 chr10 6013921 6014702 -139574586 + L1PA3 LINE L1 5375 6155 0 180 77 0 0 chr10 6014712 6014738 -139574550 + (A)n Simple_repeat Simple_repeat 1 26 0 1051 166 4 4 chr10 6014738 6016098 -139573190 - ALR/Alpha Satellite centromeric 0 1360 1 1806 180 10 10 chr10 6016647 6016947 -139572341 - AluJb SINE Alu -8 304 5 1417 118 14 5 chr10 6017360 6017580 -139571708 + Charlie3 DNA MER1_type 2485 2706 -4 2339 104 3 0 chr10 6017794 6018091 -139571197 - AluSp SINE Alu -14 299 2 317 195 103 0 chr10 6018106 6018193 -139571095 - MLT1J LTR MaLR -28 483 388 2442 74 0 10 chr10 6018978 6019287 -139570001 - AluSc SINE Alu -3 306 1 216 0 0 0 chr10 6019291 6019315 -139569973 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1838 116 0 0 chr10 6020202 6020443 -139568845 - AluSx SINE Alu -14 298 58 676 158 38 15 chr10 6020498 6020671 -139568617 + FLAM_C SINE Alu 6 181 0 1672 144 0 4 chr10 6021452 6021688 -139567600 + AluJo SINE Alu 1 235 -77 828 257 155 40 chr10 6021856 6022018 -139567270 + HAL1 LINE L1 1172 1314 -1193 2305 109 3 0 chr10 6022018 6022312 -139566976 + AluSx SINE Alu 1 295 -17 828 257 155 40 chr10 6022312 6022569 -139566719 + HAL1 LINE L1 1314 1639 -868 1071 138 25 0 chr10 6022573 6022732 -139566556 + FRAM SINE Alu 8 170 -6 625 220 38 6 chr10 6022733 6022892 -139566396 + HAL1 LINE L1 1623 1786 -721 2047 108 41 7 chr10 6022941 6023236 -139566052 + AluSx SINE Alu 1 305 -7 363 333 35 0 chr10 6023485 6023656 -139565632 - HAL1 LINE L1 -614 1893 1717 312 185 33 22 chr10 6023753 6023845 -139565443 + HAL1 LINE L1 2319 2411 -96 480 305 72 19 chr10 6024276 6024538 -139564750 - L2 LINE L2 -811 2503 2228 2004 199 52 22 chr10 6024964 6025422 -139563866 + L1MC3 LINE L1 5607 6078 -1707 2176 93 20 13 chr10 6025422 6025722 -139563566 - AluSx SINE Alu -10 302 1 326 175 34 3 chr10 6025746 6025816 -139563472 + AluS SINE Alu 3 57 -243 258 253 40 0 chr10 6025994 6026069 -139563219 - LTR67 LTR ERVL -2 555 478 226 202 165 28 chr10 6026084 6026193 -139563095 + AluJb SINE Alu 5 128 -174 1026 144 0 6 chr10 6027771 6027938 -139561350 - FRAM SINE Alu 0 166 1 2264 115 0 0 chr10 6028708 6029003 -139560285 - AluSq SINE Alu -18 295 1 207 0 0 0 chr10 6030194 6030217 -139559071 + (A)n Simple_repeat Simple_repeat 1 23 0 1626 172 0 12 chr10 6030523 6030779 -139558509 + AluJb SINE Alu 2 254 -58 201 74 0 0 chr10 6030791 6030818 -139558470 + (CAAAA)n Simple_repeat Simple_repeat 3 29 0 3982 78 18 12 chr10 6030930 6031497 -139557791 + L1PA8A LINE L1 5562 6131 0 2116 104 24 0 chr10 6032226 6032513 -139556775 - AluSx SINE Alu -18 294 1 386 393 13 13 chr10 6032938 6033162 -139556126 - MIR SINE MIR -3 259 36 200 438 20 7 chr10 6033216 6033369 -139555919 + L2 LINE L2 3116 3270 -2 238 83 0 42 chr10 6033637 6033685 -139555603 + (TCC)n Simple_repeat Simple_repeat 3 48 0 1788 168 7 7 chr10 6034282 6034586 -139554702 + AluJo SINE Alu 1 304 -8 3207 106 11 44 chr10 6035221 6035395 -139553893 - L1MA5A LINE L1 -1 6296 6118 2269 115 0 3 chr10 6035395 6035700 -139553588 - AluSx SINE Alu -3 309 6 3207 106 11 44 chr10 6035700 6036099 -139553189 - L1MA5A LINE L1 -179 6118 5742 1951 137 20 10 chr10 6036174 6036473 -139552815 - AluJb SINE Alu -10 302 1 533 280 125 41 chr10 6036544 6037339 -139551949 - L2 LINE L2 -13 3300 2353 208 242 0 16 chr10 6037400 6037462 -139551826 - L2 LINE L2 -1522 1792 1732 24 67 0 0 chr10 6038534 6038579 -139550709 + AT_rich Low_complexity Low_complexity 1 45 0 1941 138 7 14 chr10 6038605 6038895 -139550393 + AluSx SINE Alu 7 294 -18 2153 102 0 36 chr10 6038998 6039191 -139550097 + L1PA15 LINE L1 5845 6023 -142 1836 154 33 10 chr10 6039191 6039490 -139549798 + AluJb SINE Alu 1 306 -6 2153 102 0 36 chr10 6039490 6039629 -139549659 + L1PA15 LINE L1 6023 6165 0 2106 82 16 0 chr10 6039696 6039953 -139549335 + AluSx SINE Alu 1 261 -51 904 71 18 0 chr10 6039997 6040109 -139549179 + AluSg/x SINE Alu 183 296 -14 28 0 0 0 chr10 6040779 6040807 -139548481 + AT_rich Low_complexity Low_complexity 1 28 0 1240 219 119 46 chr10 6041377 6041898 -139547390 + MLT1E3 LTR MaLR 32 590 -34 2246 108 3 10 chr10 6042047 6042352 -139546936 - AluSc SINE Alu -6 303 1 227 178 171 112 chr10 6042361 6042513 -139546775 - L1MC4 LINE L1 -2 8040 7880 364 280 21 0 chr10 6042607 6042700 -139546588 - MIR SINE MIR -108 154 60 286 284 0 0 chr10 6042742 6042816 -139546472 - LTR33A LTR ERVL -1 522 449 303 308 60 8 chr10 6043047 6043180 -139546108 + MIR3 SINE MIR 51 190 -18 475 203 92 26 chr10 6043709 6043862 -139545426 + LTR67 LTR ERVL 395 557 0 619 197 15 22 chr10 6043864 6044001 -139545287 - MIR SINE MIR -64 198 63 1792 167 24 17 chr10 6044056 6044378 -139544910 + AluJb SINE Alu 1 312 0 1059 163 5 16 chr10 6044612 6044796 -139544492 - AluJb SINE Alu -10 302 121 587 108 32 0 chr10 6044900 6044993 -139544295 - AluJ/FLAM SINE Alu -215 97 2 3424 229 111 3 chr10 6045064 6046011 -139543277 - L1MC4 LINE L1 -237 7805 6757 2355 110 0 10 chr10 6046011 6046033 -139543255 - AluSx SINE Alu -5 307 286 264 100 0 0 chr10 6046033 6046073 -139543215 + (CTTG)n Simple_repeat Simple_repeat 2 41 0 2355 110 0 10 chr10 6046073 6046360 -139542928 - AluSx SINE Alu -26 286 1 428 214 9 0 chr10 6046622 6046734 -139542554 + (ATG)n Simple_repeat Simple_repeat 2 114 0 412 192 73 136 chr10 6047683 6047860 -139541428 + MER5A DNA MER1_type 24 189 0 1988 228 108 67 chr10 6048641 6049122 -139540166 - MER21B LTR ERV1 -51 812 287 2125 117 10 0 chr10 6049122 6049412 -139539876 - AluSx SINE Alu -19 293 1 1988 228 108 67 chr10 6049412 6049693 -139539595 - MER21B LTR ERV1 -576 287 19 323 257 89 20 chr10 6050592 6050693 -139538595 - L2 LINE L2 -16 3297 3190 2067 114 3 31 chr10 6050854 6051141 -139538147 + AluJb SINE Alu 2 281 -31 216 0 0 0 chr10 6051141 6051165 -139538123 + (CA)n Simple_repeat Simple_repeat 2 25 0 2067 114 3 31 chr10 6051165 6051194 -139538094 + AluJb SINE Alu 281 309 -3 22 35 0 0 chr10 6051647 6051676 -139537612 + GC_rich Low_complexity Low_complexity 1 29 0 28 29 0 0 chr10 6051717 6051752 -139537536 + GC_rich Low_complexity Low_complexity 1 35 0 347 238 220 24 chr10 6054368 6054536 -139534752 - LTR33 LTR ERVL -241 280 80 197 271 208 0 chr10 6054796 6054892 -139534396 - L2 LINE L2 0 3272 3157 2009 132 3 17 chr10 6055556 6055852 -139533436 + AluJo SINE Alu 7 298 -14 2424 88 3 0 chr10 6056060 6056366 -139532922 + AluSx SINE Alu 1 307 -5 1027 89 0 182 chr10 6056378 6056614 -139532674 + 7SK RNA RNA 1 193 0 1031 116 103 1 chr10 6056631 6056838 -139532450 - L1MA5A LINE L1 -421 5876 5652 1991 131 10 16 chr10 6057093 6057398 -139531890 + AluSx SINE Alu 1 303 -9 2097 139 0 7 chr10 6057470 6057780 -139531508 + AluSx SINE Alu 1 308 -4 286 235 82 20 chr10 6058696 6058794 -139530494 - MER5B DNA MER1_type -14 164 61 416 271 49 7 chr10 6058794 6058938 -139530350 + MER112 DNA MER1_type 94 243 -17 1714 187 3 13 chr10 6059350 6059649 -139529639 + AluJb SINE Alu 2 297 -15 2151 116 33 7 chr10 6059651 6059953 -139529335 + AluSx SINE Alu 1 310 -2 273 263 63 0 chr10 6060079 6060174 -139529114 - L2 LINE L2 -27 3286 3186 2246 92 3 3 chr10 6060325 6060619 -139528669 + AluSx SINE Alu 1 294 -18 490 268 121 53 chr10 6060757 6061002 -139528286 - L2 LINE L2 -342 2972 2745 2169 125 0 7 chr10 6061002 6061299 -139527989 - AluSx SINE Alu -15 297 3 490 268 121 53 chr10 6061299 6061539 -139527749 - L2 LINE L2 -569 2745 2454 2654 46 0 7 chr10 6061951 6062257 -139527031 - AluY SINE Alu -7 304 1 700 161 0 15 chr10 6062721 6062851 -139526437 - L1PB4 LINE L1 -101 6055 5928 315 0 0 0 chr10 6062883 6062918 -139526370 + (TG)n Simple_repeat Simple_repeat 2 36 0 1735 172 7 14 chr10 6062919 6063209 -139526079 - AluJb SINE Alu -24 288 1 189 0 0 0 chr10 6063239 6063260 -139526028 + (TTAA)n Simple_repeat Simple_repeat 2 22 0 1929 108 75 4 chr10 6063261 6063539 -139525749 - AluSg SINE Alu -12 298 1 991 123 20 27 chr10 6063675 6063821 -139525467 - AluSq/x SINE Alu -167 145 1 460 267 87 20 chr10 6063824 6063974 -139525314 - HERV16 LTR ERVL -3144 1852 1693 * 491 370 26 18 chr10 6063970 6064243 -139525045 + ERVL LTR ERVL 3652 3926 -1838 1821 145 48 3 chr10 6064245 6064534 -139524754 + AluSq SINE Alu 1 302 -11 1049 116 0 7 chr10 6064942 6065088 -139524200 + AluSq/x SINE Alu 2 146 -166 508 141 0 0 chr10 6065088 6065166 -139524122 + AluS SINE Alu 221 298 -12 471 278 143 30 chr10 6065851 6066186 -139523102 + LTR16A LTR ERVL 61 433 -17 234 296 0 20 chr10 6066485 6066583 -139522705 + A-rich Low_complexity Low_complexity 2 97 0 1438 174 17 20 chr10 6066768 6067061 -139522227 - AluSq SINE Alu -21 292 1 244 323 23 46 chr10 6067288 6067418 -139521870 + MIR SINE MIR 136 262 0 182 304 0 0 chr10 6067589 6067635 -139521653 + L2 LINE L2 3252 3297 -16 1071 92 0 0 chr10 6067641 6067794 -139521494 + (TGGA)n Simple_repeat Simple_repeat 4 156 0 796 157 0 29 chr10 6067813 6068256 -139521032 + (TGGA)n Simple_repeat Simple_repeat 1 429 0 337 271 75 40 chr10 6069043 6069242 -139520046 - L1ME4a LINE L1 -116 6005 5800 634 280 21 5 chr10 6069431 6069620 -139519668 + LTR16A1 LTR ERVL 252 443 -14 291 250 0 12 chr10 6069637 6069717 -139519571 - L1ME4a LINE L1 -318 5803 5725 2280 97 30 0 chr10 6071885 6072184 -139517104 + AluSx SINE Alu 1 308 -4 2303 119 3 0 chr10 6072192 6072503 -139516785 + AluSx SINE Alu 1 312 0 1698 148 26 22 chr10 6072516 6072827 -139516461 - MER47A DNA MER2_type -54 312 1 2243 90 10 10 chr10 6073260 6073549 -139515739 - AluSx SINE Alu -23 289 1 2363 97 0 7 chr10 6074091 6074391 -139514897 + AluSg1 SINE Alu 1 298 -11 228 259 65 9 chr10 6074589 6074697 -139514591 - L1P4 LINE L1 -312 5851 5738 338 314 134 23 chr10 6074729 6074901 -139514387 - L1ME LINE L1 -332 5789 5599 2361 110 3 0 chr10 6075312 6075620 -139513668 - AluSg SINE Alu -1 309 1 516 247 16 59 chr10 6076208 6076394 -139512894 + MER5B DNA MER1_type 1 178 0 1072 125 96 82 chr10 6076443 6076722 -139512566 - MLT1A1 LTR MaLR -3 425 69 2485 59 0 20 chr10 6076722 6077025 -139512263 - AluY SINE Alu -14 297 1 1072 125 96 82 chr10 6077025 6077095 -139512193 - MLT1A1 LTR MaLR -359 69 1 4765 147 20 71 chr10 6077332 6078102 -139511186 - L1MA7 LINE L1 -4 6287 5479 2439 92 3 9 chr10 6078102 6078417 -139510871 - AluSp SINE Alu 0 313 1 4765 147 20 71 chr10 6078417 6078656 -139510632 - L1MA7 LINE L1 -812 5479 5333 2123 120 0 14 chr10 6078656 6078948 -139510340 - AluSx SINE Alu -6 306 19 4765 147 20 71 chr10 6078948 6079002 -139510286 - L1MA7 LINE L1 -958 5333 5278 242 246 16 127 chr10 6079327 6079453 -139509835 + MIR SINE MIR 81 192 -70 635 223 114 0 chr10 6080465 6080631 -139508657 + L1PA16 LINE L1 5962 6146 -20 29 28 0 0 chr10 6080631 6080667 -139508621 + AT_rich Low_complexity Low_complexity 1 36 0 2172 106 0 10 chr10 6080667 6081025 -139508263 + AluSx SINE Alu 1 355 0 691 91 10 0 chr10 6081477 6081576 -139507712 + HY3 scRNA scRNA 1 100 -1 1826 133 0 46 chr10 6081592 6081906 -139507382 + AluJb SINE Alu 14 314 0 2330 108 0 0 chr10 6081914 6082209 -139507079 + AluSg SINE Alu 1 295 -15 364 259 184 6 chr10 6082209 6082367 -139506921 + MIR3 SINE MIR 22 207 -1 800 164 31 0 chr10 6083156 6083284 -139506004 + AluJo SINE Alu 4 135 -177 1873 182 0 7 chr10 6083284 6083591 -139505697 + AluJo SINE Alu 1 305 -7 283 283 0 0 chr10 6084241 6084301 -139504987 + L2 LINE L2 3203 3262 -10 2314 115 0 0 chr10 6084421 6084716 -139504572 + AluSx SINE Alu 1 295 -17 881 183 11 123 chr10 6085025 6085165 -139504123 + L1MD3 LINE L1 7009 7102 -893 1705 165 13 22 chr10 6085165 6085480 -139503808 + AluJo SINE Alu 1 312 0 881 183 11 123 chr10 6085480 6085624 -139503664 + L1MD3 LINE L1 7102 7261 -734 871 122 46 8 chr10 6085628 6085759 -139503529 - AluJo SINE Alu -176 136 1 613 186 8 0 chr10 6085761 6085879 -139503409 + MLT1F1 LTR MaLR 2 120 -447 2573 163 48 39 chr10 6085883 6086104 -139503184 + L1MD3 LINE L1 7403 7621 -374 2359 94 0 7 chr10 6086104 6086401 -139502887 + AluSg SINE Alu 1 295 -15 2573 163 48 39 chr10 6086401 6086745 -139502543 + L1MD3 LINE L1 7621 7973 -22 2063 115 3 0 chr10 6086745 6087031 -139502257 + AluSx SINE Alu 1 287 -25 445 212 71 0 chr10 6087235 6087334 -139501954 - Charlie2 DNA MER1_type -2714 148 43 2082 131 0 0 chr10 6087336 6087626 -139501662 + AluJb SINE Alu 2 291 -21 215 287 59 20 chr10 6087955 6088056 -139501232 + MIR SINE MIR 60 164 -98 4193 85 5 0 chr10 6088162 6088752 -139500536 + L1PA12 LINE L1 5576 6168 0 225 0 0 0 chr10 6088806 6088831 -139500457 + (T)n Simple_repeat Simple_repeat 1 25 0 2139 148 0 0 chr10 6088844 6089154 -139500134 + AluSx SINE Alu 1 310 -2 2019 138 10 0 chr10 6089443 6089732 -139499556 + AluJb SINE Alu 1 292 -20 372 299 59 18 chr10 6090115 6090336 -139498952 - L2 LINE L2 -263 3050 2821 180 316 38 13 chr10 6090983 6091062 -139498226 - MIR SINE MIR -117 145 65 2365 109 0 0 chr10 6091242 6091554 -139497734 + AluSx SINE Alu 1 312 0 23 0 0 0 chr10 6091554 6091577 -139497711 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr10 6092030 6092052 -139497236 + AT_rich Low_complexity Low_complexity 1 22 0 2564 64 0 0 chr10 6096293 6096589 -139492699 + AluSq SINE Alu 1 296 -17 451 262 115 47 chr10 6096785 6096976 -139492312 - MIR SINE MIR -22 240 37 893 179 11 17 chr10 6097286 6097568 -139491720 + MER1B DNA MER1_type 1 339 0 256 291 22 82 chr10 6099468 6099650 -139489638 - MIR3 SINE MIR -3 205 35 284 246 16 0 chr10 6099752 6099813 -139489475 - MIR SINE MIR -105 157 96 2440 80 0 0 chr10 6100204 6100505 -139488783 - AluSx SINE Alu -11 301 1 180 228 0 0 chr10 6100818 6100875 -139488413 + (CACG)n Simple_repeat Simple_repeat 2 58 0 1996 137 3 20 chr10 6102524 6102830 -139486458 + AluJb SINE Alu 2 302 -10 2119 104 28 7 chr10 6103392 6103681 -139485607 + AluSp SINE Alu 1 295 -18 1004 230 59 45 chr10 6104601 6104975 -139484313 + L1MB5 LINE L1 5795 6173 -1 217 186 12 12 chr10 6106137 6106223 -139483065 + (CA)n Simple_repeat Simple_repeat 1 86 0 264 272 11 11 chr10 6106244 6106336 -139482952 + (CA)n Simple_repeat Simple_repeat 2 93 0 252 0 0 0 chr10 6106338 6106366 -139482922 + (CAG)n Simple_repeat Simple_repeat 2 29 0 1941 146 0 4 chr10 6106912 6107192 -139482096 + AluJo SINE Alu 7 285 -27 225 94 0 0 chr10 6107206 6107238 -139482050 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 446 127 0 0 chr10 6107429 6107500 -139481788 + FLAM SINE Alu 58 128 -15 670 141 29 106 chr10 6108465 6108576 -139480712 + L1MB3 LINE L1 6027 6123 -60 2185 101 0 14 chr10 6108576 6108899 -139480389 + AluSx SINE Alu 1 319 0 670 141 29 106 chr10 6108899 6108956 -139480332 + L1MB3 LINE L1 6123 6183 0 421 251 48 18 chr10 6111388 6111555 -139477733 - MER5B DNA MER1_type -2 176 5 260 203 18 74 chr10 6111823 6111986 -139477302 + (CCCCAG)n Simple_repeat Simple_repeat 5 158 0 760 181 17 23 chr10 6112615 6112792 -139476496 + L1PA16 LINE L1 5991 6166 0 1877 137 27 21 chr10 6112870 6113205 -139476083 - MER1B DNA MER1_type 0 337 1 1433 156 71 7 chr10 6113786 6114055 -139475233 - AluJo SINE Alu -25 287 2 876 149 0 0 chr10 6114508 6114649 -139474639 + FLAM_C SINE Alu 1 141 -2 336 45 0 0 chr10 6116249 6116293 -139472995 + tRNA-Cys-TGC tRNA tRNA 1 44 -31 920 74 16 0 chr10 6116302 6116424 -139472864 + AluYb8 SINE Alu 3 126 -192 313 164 30 30 chr10 6116425 6116492 -139472796 + AluY SINE Alu 76 142 -159 313 164 30 30 chr10 6116475 6116542 -139472746 + AluY SINE Alu 76 142 -159 313 164 30 30 chr10 6116525 6116592 -139472696 + AluY SINE Alu 76 142 -159 313 164 30 30 chr10 6116575 6116642 -139472646 + AluY SINE Alu 76 142 -159 313 164 30 30 chr10 6116625 6116692 -139472596 + AluY SINE Alu 76 142 -159 304 142 63 24 chr10 6116675 6116725 -139472563 + AluSc SINE Alu 76 99 -200 * 1815 64 8 0 chr10 6116725 6116959 -139472329 + AluY SINE Alu 76 311 0 304 142 63 24 chr10 6116959 6116989 -139472299 + AluSc SINE Alu 99 126 -173 2169 79 41 0 chr10 6117256 6117547 -139471741 + AluY SINE Alu 1 303 -8 1808 103 38 0 chr10 6117571 6117834 -139471454 + AluSq SINE Alu 29 301 -12 198 0 0 0 chr10 6118914 6118936 -139470352 + (A)n Simple_repeat Simple_repeat 1 22 0 1645 150 31 14 chr10 6118936 6119223 -139470065 + AluJo SINE Alu 1 292 -20 1552 164 0 69 chr10 6119716 6119858 -139469430 + AluJo SINE Alu 1 151 -167 207 0 0 0 chr10 6119858 6119881 -139469407 + (TCTCCC)n Simple_repeat Simple_repeat 1 23 0 9831 33 16 103 chr10 6119881 6121333 -139467955 + SVA Other Other 57 1382 -4 1552 164 0 69 chr10 6121333 6121528 -139467760 + AluJo SINE Alu 149 318 0 2292 106 0 0 chr10 6121615 6121927 -139467361 + AluSx SINE Alu 1 312 0 22 35 0 0 chr10 6123171 6123200 -139466088 + GC_rich Low_complexity Low_complexity 1 29 0 330 311 8 0 chr10 6123382 6123501 -139465787 + GA-rich Low_complexity Low_complexity 2 121 0 35 83 0 0 chr10 6123799 6123883 -139465405 + GC_rich Low_complexity Low_complexity 1 84 0 23 33 0 0 chr10 6124137 6124167 -139465121 + GC_rich Low_complexity Low_complexity 1 30 0 254 269 16 44 chr10 6125714 6125896 -139463392 + (CCCCG)n Simple_repeat Simple_repeat 2 178 0 * 303 243 0 58 chr10 6125814 6125917 -139463371 + C-rich Low_complexity Low_complexity 6 102 0 22 0 0 0 chr10 6126621 6126643 -139462645 + GC_rich Low_complexity Low_complexity 1 22 0 212 292 19 97 chr10 6127085 6127239 -139462049 - MIR3 SINE MIR -3 205 64 1631 143 10 67 chr10 6127497 6127811 -139461477 + AluJb SINE Alu 7 302 -10 961 144 24 0 chr10 6128343 6128510 -139460778 + L1MC1 LINE L1 5682 5852 -481 2267 97 0 0 chr10 6128511 6128801 -139460487 + AluSx SINE Alu 1 290 -22 1657 129 0 12 chr10 6129017 6129273 -139460015 - AluSx SINE Alu 0 312 60 436 313 56 28 chr10 6129283 6129462 -139459826 + L1 LINE L1 3589 3772 -2374 959 166 57 26 chr10 6129462 6129655 -139459633 + Tigger2a DNA MER2_type 1 199 -235 1735 146 3 7 chr10 6129762 6130016 -139459272 - Tigger3(Golem) DNA MER2_type 0 3028 2773 1938 116 29 0 chr10 6130016 6130316 -139458972 + AluSx SINE Alu 1 308 0 1735 146 3 7 chr10 6130316 6130348 -139458940 - Tigger3(Golem) DNA MER2_type -255 2773 2742 721 155 0 9 chr10 6130350 6130466 -139458822 + AluJ SINE Alu 1 115 -197 2038 147 99 27 chr10 6130466 6130967 -139458321 + MLT2A2 LTR ERVL 2 554 0 1238 127 5 20 chr10 6130967 6131164 -139458124 + AluJ SINE Alu 110 303 -9 2119 124 3 0 chr10 6132124 6132431 -139456857 + AluSx SINE Alu 4 311 -1 410 331 127 19 chr10 6132552 6132875 -139456413 - L3 LINE CR1 -28 1549 1192 1264 177 88 113 chr10 6133270 6133723 -139455565 + LTR7 LTR ERV1 1 442 -8 349 325 68 0 chr10 6133747 6133864 -139455424 + L2 LINE L2 3148 3272 0 1465 176 21 35 chr10 6133910 6134223 -139455065 - AluJo SINE Alu 0 309 1 193 366 37 12 chr10 6134334 6134416 -139454872 + MIR SINE MIR 129 212 -50 414 0 0 0 chr10 6134579 6134625 -139454663 + (CA)n Simple_repeat Simple_repeat 2 47 0 243 88 0 0 chr10 6134905 6134939 -139454349 + (A)n Simple_repeat Simple_repeat 1 34 0 387 0 0 0 chr10 6135103 6135146 -139454142 + (TG)n Simple_repeat Simple_repeat 2 44 0 184 337 12 12 chr10 6135331 6135414 -139453874 + L3 LINE CR1 1111 1193 -384 183 358 62 0 chr10 6135702 6135783 -139453505 + MIR SINE MIR 43 128 -80 1750 160 0 10 chr10 6136203 6136497 -139452791 + AluSx SINE Alu 1 291 -21 341 203 14 14 chr10 6136550 6136624 -139452664 + L1MC4 LINE L1 6919 6992 -1050 802 175 7 7 chr10 6136624 6136761 -139452527 - FLAM_C SINE Alu -2 141 5 2244 214 65 93 chr10 6136762 6137041 -139452247 + L1MC4 LINE L1 6976 7261 -781 2238 107 0 0 chr10 6137041 6137341 -139451947 + AluSx SINE Alu 1 300 -12 2244 214 65 93 chr10 6137341 6137470 -139451818 + L1MC4 LINE L1 7261 7392 -650 2327 80 0 0 chr10 6137470 6137770 -139451518 + AluSx SINE Alu 1 300 -12 2244 214 65 93 chr10 6137770 6137964 -139451324 + L1MC4 LINE L1 7392 7590 -452 2437 192 29 27 chr10 6137964 6138145 -139451143 + L1MB2 LINE L1 5646 5825 -346 2435 57 0 16 chr10 6138145 6138460 -139450828 + AluY SINE Alu 2 311 0 2437 192 29 27 chr10 6138460 6138800 -139450488 + L1MB2 LINE L1 5825 6168 -3 2244 214 65 93 chr10 6138800 6139151 -139450137 + L1MC4 LINE L1 7590 7904 -138 183 80 0 0 chr10 6139188 6139213 -139450075 + (CA)n Simple_repeat Simple_repeat 2 26 0 342 115 0 0 chr10 6139273 6139325 -139449963 + (TAGA)n Simple_repeat Simple_repeat 1 52 0 479 200 61 9 chr10 6139336 6139451 -139449837 + L1MC4 LINE L1 7918 8038 -4 1923 141 0 16 chr10 6139897 6140201 -139449087 - AluSx SINE Alu -13 299 1 463 281 113 20 chr10 6140201 6140404 -139448884 - MLT1J LTR MaLR -289 222 1 952 112 8 0 chr10 6140482 6140616 -139448672 + AluJo SINE Alu 1 135 -177 239 218 0 18 chr10 6141007 6141062 -139448226 + MLT1L LTR MaLR 556 609 -6 25 51 0 0 chr10 6141114 6141153 -139448135 + AT_rich Low_complexity Low_complexity 1 39 0 2339 86 3 0 chr10 6141340 6141643 -139447645 + AluSq SINE Alu 1 304 -9 655 157 10 0 chr10 6142379 6142481 -139446807 + FLAM_C SINE Alu 6 108 -35 2177 114 0 3 chr10 6142491 6142797 -139446491 + AluSq SINE Alu 4 308 -5 211 338 26 0 chr10 6142797 6142874 -139446414 + MER5B DNA MER1_type 33 111 -67 2062 139 0 0 chr10 6142907 6143217 -139446071 + AluSx SINE Alu 1 310 -2 2441 59 0 10 chr10 6143265 6143572 -139445716 + AluY SINE Alu 1 304 -7 215 79 26 0 chr10 6143600 6143638 -139445650 + (TA)n Simple_repeat Simple_repeat 2 40 0 751 94 0 0 chr10 6143646 6143742 -139445546 - AluS SINE Alu -215 97 2 2650 168 24 43 chr10 6145155 6145424 -139443864 - L1MB3 LINE L1 0 6183 5911 1650 160 76 0 chr10 6145424 6145712 -139443576 - AluJo SINE Alu -2 310 1 2650 168 24 43 chr10 6145712 6145932 -139443356 - L1MB3 LINE L1 -272 5911 5702 1318 225 13 22 chr10 6145932 6146243 -139443045 + AluJo SINE Alu 1 308 -4 2650 168 24 43 chr10 6146243 6146289 -139442999 - L1MB3 LINE L1 -481 5702 5657 1726 176 13 0 chr10 6146490 6146791 -139442497 + AluJo SINE Alu 5 309 -3 340 280 75 0 chr10 6146803 6146896 -139442392 + L1ME4a LINE L1 5964 6063 -58 183 129 0 0 chr10 6147008 6147039 -139442249 + (TCCA)n Simple_repeat Simple_repeat 4 34 0 913 106 8 8 chr10 6147062 6147194 -139442094 - FLAM_C SINE Alu -1 132 1 400 236 8 79 chr10 6147978 6148105 -139441183 + MIR SINE MIR 35 152 -110 236 345 159 0 chr10 6148152 6148297 -139440991 - MIR SINE MIR 0 262 95 2128 93 23 13 chr10 6149433 6149919 -139439369 + AluSq SINE Alu 1 313 0 1435 165 85 0 chr10 6150574 6150834 -139438454 + AluJo SINE Alu 1 282 -30 997 296 173 18 chr10 6150878 6151544 -139437744 - L1ME3A LINE L1 -54 6116 5348 284 314 51 7 chr10 6151675 6151812 -139437476 + MIR SINE MIR 16 158 -104 1899 123 23 13 chr10 6152148 6152456 -139436832 + AluSq SINE Alu 3 313 0 260 191 0 0 chr10 6153060 6153107 -139436181 - MIR3 SINE MIR -54 154 108 257 266 41 101 chr10 6154047 6154314 -139434974 - L2 LINE L2 -185 3087 2837 1667 149 0 0 chr10 6154421 6154669 -139434619 - AluJb SINE Alu -15 297 50 371 320 29 0 chr10 6154669 6154772 -139434516 + MIR SINE MIR 69 174 -88 321 206 119 44 chr10 6155428 6155565 -139433723 - Charlie7 DNA MER1_type -4 2608 2456 1757 173 16 0 chr10 6155565 6155871 -139433417 + AluJo SINE Alu 1 311 -1 321 206 119 44 chr10 6155871 6155893 -139433395 - Charlie7 DNA MER1_type -156 2456 2437 2154 77 3 71 chr10 6155903 6156239 -139433049 + AluSp SINE Alu 1 313 0 671 171 106 0 chr10 6156681 6156804 -139432484 - AluJo SINE Alu -176 136 1 2045 103 14 3 chr10 6157999 6158289 -139430999 + AluSx SINE Alu 1 293 -19 444 262 0 16 chr10 6158784 6158910 -139430378 - MIR SINE MIR -126 136 13 2080 106 33 0 chr10 6160133 6160435 -139428853 + AluSp SINE Alu 1 312 -1 586 101 114 95 chr10 6160820 6160860 -139428428 + L1PA13 LINE L1 6001 6039 -124 1778 143 61 0 chr10 6160860 6160977 -139428311 + AluSx SINE Alu 1 109 -203 2138 88 3 7 chr10 6160977 6161272 -139428016 + AluSx SINE Alu 8 301 -11 1778 143 61 0 chr10 6161272 6161448 -139427840 + AluSx SINE Alu 109 312 0 586 101 114 95 chr10 6161448 6161565 -139427723 + L1PA13 LINE L1 6039 6161 -2 3779 183 45 51 chr10 6161793 6162754 -139426534 + LTR5 LTR ERVK 1 955 -14 405 278 30 0 chr10 6162768 6162901 -139426387 - L3 LINE CR1 -308 1269 1133 22 70 0 0 chr10 6163544 6163587 -139425701 + GC_rich Low_complexity Low_complexity 1 43 0 1640 233 79 56 chr10 6164205 6164850 -139424438 + L1MC4a LINE L1 6507 7166 -642 2799 159 43 0 chr10 6164862 6165379 -139423909 + L1MB3 LINE L1 5643 6181 -2 1124 181 0 23 chr10 6165389 6165604 -139423684 + AluJo SINE Alu 73 282 -30 326 200 0 0 chr10 6165608 6165663 -139423625 + L1MC4 LINE L1 6649 6703 -1339 * 341 278 40 32 chr10 6165634 6165760 -139423528 + L1MCa LINE L1 1996 2122 -4304 235 114 38 152 chr10 6165773 6165878 -139423410 + L1MC4a LINE L1 7160 7252 -556 258 187 120 27 chr10 6165933 6166008 -139423280 - L2 LINE L2 -348 2965 2884 1983 131 3 6 chr10 6166013 6166325 -139422963 + AluSq SINE Alu 1 311 -2 277 223 62 9 chr10 6166395 6166507 -139422781 - L1MC4 LINE L1 0 8042 7925 2166 89 7 10 chr10 6166510 6166812 -139422476 - AluSx SINE Alu -9 303 3 1512 189 38 0 chr10 6167191 6167482 -139421806 + AluJb SINE Alu 1 302 -10 2024 95 29 13 chr10 6167525 6167831 -139421457 - AluSp SINE Alu 0 313 3 342 145 0 32 chr10 6167834 6167896 -139421392 - FAM SINE Alu -1 178 119 1741 102 8 0 chr10 6168033 6168269 -139421019 + AluSx SINE Alu 16 253 -59 26 64 0 0 chr10 6168269 6168316 -139420972 + AT_rich Low_complexity Low_complexity 1 47 0 2065 107 0 3 chr10 6168528 6168817 -139420471 - AluSx SINE Alu -24 288 1 21 0 0 0 chr10 6168817 6168838 -139420450 + AT_rich Low_complexity Low_complexity 1 21 0 825 142 0 8 chr10 6168838 6168972 -139420316 - AluSq/x SINE Alu -179 133 1 189 0 0 0 chr10 6169730 6169751 -139419537 + (A)n Simple_repeat Simple_repeat 1 21 0 225 208 21 0 chr10 6170677 6170725 -139418563 + (TATATG)n Simple_repeat Simple_repeat 2 50 0 1600 154 35 3 chr10 6170766 6171051 -139418237 - AluJb SINE Alu -18 294 1 2058 129 0 7 chr10 6171374 6171683 -139417605 - AluSg SINE Alu -3 307 1 872 81 16 0 chr10 6171689 6171813 -139417475 - L1PB1 LINE L1 -3 6148 6023 742 136 8 0 chr10 6171814 6171932 -139417356 - L1PB1 LINE L1 -76 6075 5957 239 327 243 22 chr10 6172211 6172483 -139416805 - L2 LINE L2 -63 3209 2878 184 293 338 6 chr10 6172684 6172841 -139416447 - MIR SINE MIR -6 256 48 2255 95 0 3 chr10 6174010 6174314 -139414974 - AluSx SINE Alu -9 303 1 299 244 61 0 chr10 6174593 6174675 -139414613 + MIR3 SINE MIR 122 208 0 1635 164 10 7 chr10 6175395 6175688 -139413600 - AluSx SINE Alu -18 294 1 194 342 53 13 chr10 6175870 6175946 -139413342 - L2 LINE L2 -62 3210 3132 354 349 34 34 chr10 6176188 6176363 -139412925 + MER5B DNA MER1_type 2 176 -2 299 269 186 26 chr10 6176430 6176586 -139412702 - MER5A DNA MER1_type 0 189 9 826 163 0 15 chr10 6176663 6176798 -139412490 + FLAM_C SINE Alu 1 133 0 815 128 0 0 chr10 6177866 6177983 -139411305 + FLAM_C SINE Alu 2 118 -15 23 33 0 0 chr10 6177983 6178013 -139411275 + AT_rich Low_complexity Low_complexity 1 30 0 372 330 92 42 chr10 6178253 6178492 -139410796 - MIR SINE MIR -10 252 2 395 213 117 0 chr10 6179182 6179276 -139410012 - L2 LINE L2 0 3272 3168 234 0 0 0 chr10 6179816 6179842 -139409446 + (TA)n Simple_repeat Simple_repeat 1 26 0 2199 84 7 3 chr10 6179842 6180141 -139409147 + AluSx SINE Alu 2 301 -11 216 0 0 0 chr10 6180141 6180165 -139409123 + (TA)n Simple_repeat Simple_repeat 2 25 0 1965 101 7 30 chr10 6181009 6181306 -139407982 - AluSx SINE Alu -22 290 1 290 262 78 10 chr10 6181309 6181412 -139407876 - MIR SINE MIR -115 147 38 2667 149 22 65 chr10 6182145 6182681 -139406607 + MLT2B2 LTR ERVL 3 515 0 319 321 136 0 chr10 6183022 6183162 -139406126 + MIR SINE MIR 93 251 -11 354 280 92 48 chr10 6183203 6183474 -139405814 + L2 LINE L2 2298 2580 -734 618 263 26 7 chr10 6183609 6183761 -139405527 + MIR SINE MIR 14 168 -94 268 173 27 55 chr10 6183789 6183899 -139405389 + (TTATA)n Simple_repeat Simple_repeat 5 111 0 34 24 0 0 chr10 6183968 6184009 -139405279 + AT_rich Low_complexity Low_complexity 1 41 0 189 292 62 0 chr10 6184592 6184640 -139404648 + MIR3 SINE MIR 157 207 -1 367 259 54 9 chr10 6184736 6184848 -139404440 - Charlie8 DNA MER1_type -1211 1206 1090 2422 175 24 37 chr10 6186993 6187485 -139401803 + MER66B LTR ERV1 1 486 0 28 0 0 0 chr10 6187770 6187798 -139401490 + AT_rich Low_complexity Low_complexity 1 28 0 2042 132 3 0 chr10 6187924 6188234 -139401054 + AluSx SINE Alu 2 312 0 868 277 79 38 chr10 6188357 6189041 -139400247 - L1ME3A LINE L1 -227 6337 5632 428 309 77 47 chr10 6189037 6189532 -139399756 - L1ME3A LINE L1 -1892 4648 4139 * 225 264 81 34 chr10 6189805 6189953 -139399335 - L1ME3A LINE L1 -3758 2782 2628 420 269 82 68 chr10 6189984 6190223 -139399065 - L1MEc LINE L1 -3926 2622 2371 2288 70 10 3 chr10 6190246 6190547 -139398741 + AluY SINE Alu 1 303 -8 462 338 61 19 chr10 6190677 6190890 -139398398 - L1M4 LINE L1 -1759 4387 4166 465 263 90 75 chr10 6192095 6192681 -139396607 - L1M4 LINE L1 -3424 2722 2128 554 272 125 0 chr10 6193083 6193267 -139396021 + MIR SINE MIR 56 262 0 591 232 137 42 chr10 6193463 6193631 -139395657 + MIR3 SINE MIR 20 203 -5 246 322 44 0 chr10 6194652 6194742 -139394546 + MER5A DNA MER1_type 9 102 -87 209 266 101 13 chr10 6195350 6195429 -139393859 + MIR SINE MIR 20 105 -103 361 220 13 0 chr10 6197750 6197838 -139391450 - L1ME2 LINE L1 -10 6223 6144 1037 254 38 38 chr10 6197847 6198317 -139390971 - L1ME2 LINE L1 -142 6091 5654 662 128 0 0 chr10 6198342 6198444 -139390844 - AluSx SINE Alu -2 308 207 819 156 0 0 chr10 6198444 6198566 -139390722 - AluSx SINE Alu -191 122 1 1426 233 88 67 chr10 6198570 6198939 -139390349 - L1ME2 LINE L1 -577 5656 5296 2350 77 0 3 chr10 6198939 6199250 -139390038 - AluY SINE Alu -1 310 1 1426 233 88 67 chr10 6199250 6199727 -139389561 - L1ME2 LINE L1 -937 5296 4794 430 250 127 26 chr10 6199850 6200030 -139389258 - L1ME2 LINE L1 -1648 4567 4350 717 45 0 0 chr10 6200030 6200119 -139389169 + (TA)n Simple_repeat Simple_repeat 2 90 0 430 250 127 26 chr10 6200119 6200206 -139389082 - L1ME2 LINE L1 -1865 4350 4273 3027 277 71 12 chr10 6200206 6201493 -139387795 - L1ME2 LINE L1 -3913 2483 1122 347 280 8 42 chr10 6201505 6201557 -139387731 - L1ME2 LINE L1 -5179 1026 974 2165 116 0 0 chr10 6201557 6201850 -139387438 + AluSx SINE Alu 1 293 -19 347 280 8 42 chr10 6201850 6201915 -139387373 - L1ME2 LINE L1 -5231 974 913 951 178 55 55 chr10 6201924 6202104 -139387184 - MER58A DNA MER1_type -2201 219 36 2062 104 0 0 chr10 6202104 6202439 -139386849 + AluSq SINE Alu 8 342 0 951 178 55 55 chr10 6202439 6202476 -139386812 - MER58A DNA MER1_type -2383 37 1 354 243 46 99 chr10 6202489 6202555 -139386733 - L1ME2 LINE L1 -5449 947 879 1729 129 42 17 chr10 6202555 6202842 -139386446 - AluSx SINE Alu -14 298 5 354 243 46 99 chr10 6202842 6203079 -139386209 - L1ME2 LINE L1 -5517 879 660 571 265 38 25 chr10 6203389 6203627 -139385661 - L1ME2 LINE L1 -6122 274 34 215 339 148 17 chr10 6203862 6204074 -139385214 - MIR3 SINE MIR -6 256 15 2014 114 0 14 chr10 6204225 6204522 -139384766 - AluSx SINE Alu -19 293 1 2099 114 0 7 chr10 6205889 6206188 -139383100 - AluSx SINE Alu -15 297 1 1581 146 8 0 chr10 6206194 6206447 -139382841 - AluSx SINE Alu -14 298 44 1015 146 0 12 chr10 6206447 6206611 -139382677 - AluJb SINE Alu -150 162 1 180 188 0 59 chr10 6206882 6206983 -139382305 + (CATA)n Simple_repeat Simple_repeat 4 98 0 188 289 103 21 chr10 6207044 6207141 -139382147 + L2 LINE L2 3209 3313 0 1975 127 3 19 chr10 6207926 6208241 -139381047 + AluSx SINE Alu 1 310 -2 287 292 144 26 chr10 6208332 6208490 -139380798 - MIR SINE MIR -50 212 43 183 302 16 0 chr10 6209691 6209754 -139379534 + L2 LINE L2 3250 3313 0 234 242 12 121 chr10 6210129 6210285 -139379003 + MIR3 SINE MIR 40 180 -28 210 143 0 0 chr10 6210598 6210633 -139378655 + (CA)n Simple_repeat Simple_repeat 1 35 0 2246 76 14 0 chr10 6210729 6211019 -139378269 + AluSq SINE Alu 1 294 -19 798 172 0 0 chr10 6212189 6212730 -139376558 + (TTGG)n Simple_repeat Simple_repeat 1 541 0 2088 115 0 7 chr10 6213685 6213989 -139375299 + AluSx SINE Alu 2 303 -9 2269 100 3 3 chr10 6214691 6214990 -139374298 + AluSq SINE Alu 3 301 -12 186 167 28 0 chr10 6215017 6215053 -139374235 + MER5B DNA MER1_type 88 124 -54 1127 173 138 27 chr10 6215057 6215113 -139374175 - L1MB5 LINE L1 0 6174 6126 1735 158 69 91 chr10 6215113 6215518 -139373770 - MSTD LTR MaLR 0 396 1 1127 173 138 27 chr10 6215518 6215721 -139373567 - L1MB5 LINE L1 -48 6126 5886 181 228 0 70 chr10 6215728 6215785 -139373503 + MER5B DNA MER1_type 122 174 -4 230 218 0 36 chr10 6215796 6215839 -139373449 - MER5A DNA MER1_type 0 189 147 840 127 0 8 chr10 6215839 6215973 -139373315 + L1MA5A LINE L1 6160 6292 -5 230 218 0 36 chr10 6215973 6215984 -139373304 - MER5A DNA MER1_type -42 147 137 775 201 13 0 chr10 6215984 6216143 -139373145 - MER5A DNA MER1_type -28 161 1 2203 124 0 0 chr10 6216182 6216481 -139372807 + AluSx SINE Alu 14 312 0 1728 197 64 33 chr10 6217332 6217443 -139371845 - MER63B DNA MER1_type -628 434 328 1578 185 49 3 chr10 6217443 6217729 -139371559 + AluJo SINE Alu 1 299 -13 1728 197 64 33 chr10 6217729 6218038 -139371250 - MER63B DNA MER1_type -734 328 1 1049 140 45 30 chr10 6218134 6218334 -139370954 - MER3 DNA MER1_type -6 203 1 1245 103 0 0 chr10 6218434 6218589 -139370699 + AluSg SINE Alu 1 155 -155 213 196 43 0 chr10 6219636 6219682 -139369606 + GA-rich Low_complexity Low_complexity 3 50 0 1883 154 7 0 chr10 6219721 6220013 -139369275 + AluJo SINE Alu 1 294 -18 671 225 40 12 chr10 6220052 6220225 -139369063 - MER5A DNA MER1_type -11 178 1 654 233 15 0 chr10 6220680 6220813 -139368475 + Charlie1 DNA MER1_type 57 191 -2570 350 175 6 129 chr10 6220811 6220955 -139368333 + Charlie1 DNA MER1_type 2573 2694 -67 * 2310 106 6 0 chr10 6220955 6221266 -139368022 - AluSq SINE Alu 0 313 1 350 175 6 129 chr10 6221266 6221292 -139367996 + Charlie1 DNA MER1_type 2694 2722 -39 2642 177 107 35 chr10 6221318 6221681 -139367607 + L1MB5 LINE L1 5366 5701 -463 2101 112 3 32 chr10 6221681 6221994 -139367294 + AluSx SINE Alu 1 304 -8 2642 177 107 35 chr10 6221994 6222356 -139366932 + L1MB5 LINE L1 5701 6163 -1 3263 191 20 30 chr10 6222760 6223140 -139366148 + L1MCa LINE L1 84 466 -5441 1319 162 199 39 chr10 6223140 6223528 -139365760 - LTR7 LTR ERV1 0 450 1 3263 191 20 30 chr10 6223528 6224227 -139365061 + L1MCa LINE L1 466 935 -4972 937 281 82 24 chr10 6224241 6224404 -139364884 + MLT1J LTR MaLR 1 153 -358 5234 120 24 31 chr10 6224404 6225282 -139364006 - MER4D LTR ERV1 0 872 1 937 281 82 24 chr10 6225282 6225535 -139363753 + MLT1J LTR MaLR 153 441 -70 4321 85 2 0 chr10 6225639 6226192 -139363096 - MER41A LTR ERV1 0 554 1 2000 175 34 11 chr10 6226192 6226565 -139362723 + MSTB1 LTR MaLR 10 394 -38 1185 82 19 0 chr10 6226566 6226724 -139362564 + AluSc SINE Alu 134 294 -15 219 69 0 0 chr10 6226724 6226753 -139362535 + (GA)n Simple_repeat Simple_repeat 1 29 0 1112 73 11 17 chr10 6226773 6226952 -139362336 + (GAAA)n Simple_repeat Simple_repeat 1 178 0 324 61 0 61 chr10 6226952 6227001 -139362287 + MSTB1 LTR MaLR 412 457 0 1897 171 14 26 chr10 6227571 6227692 -139361596 + MER7A DNA MER2_type 2 123 -2915 1985 133 7 0 chr10 6227692 6227995 -139361293 + AluSx SINE Alu 1 305 0 1897 171 14 26 chr10 6227995 6228223 -139361065 + MER7A DNA MER2_type 123 346 0 261 301 126 79 chr10 6228266 6228608 -139360680 - MLT1K LTR MaLR -97 491 134 780 228 95 30 chr10 6228610 6228679 -139360609 + L1MCa LINE L1 1650 1713 -4894 2151 135 3 0 chr10 6228679 6228976 -139360312 + AluSx SINE Alu 1 298 -14 780 228 95 30 chr10 6228976 6229169 -139360119 + L1MCa LINE L1 1713 1929 -4678 1069 202 50 60 chr10 6229186 6229413 -139359875 + MLT1C LTR MaLR 6 231 -236 1726 177 3 10 chr10 6229413 6229712 -139359576 - AluSx SINE Alu -15 297 1 1069 202 50 60 chr10 6229712 6229766 -139359522 + MLT1C LTR MaLR 231 284 -183 379 225 15 36 chr10 6229771 6229881 -139359407 + L1ME1 LINE L1 5894 6016 -148 * 421 232 62 9 chr10 6229879 6229991 -139359297 + L1MA10 LINE L1 6210 6327 -7 227 190 52 0 chr10 6229997 6230055 -139359233 + LTR33A LTR ERVL 459 519 -4 429 20 0 0 chr10 6230189 6230239 -139359049 + (CA)n Simple_repeat Simple_repeat 1 50 0 315 0 0 0 chr10 6230288 6230323 -139358965 + (CA)n Simple_repeat Simple_repeat 2 36 0 384 22 0 0 chr10 6230385 6230430 -139358858 + (CA)n Simple_repeat Simple_repeat 2 46 0 297 0 0 0 chr10 6230479 6230512 -139358776 + (CA)n Simple_repeat Simple_repeat 2 34 0 225 0 0 0 chr10 6230574 6230599 -139358689 + (CA)n Simple_repeat Simple_repeat 2 26 0 414 0 0 0 chr10 6230650 6230696 -139358592 + (CA)n Simple_repeat Simple_repeat 2 47 0 412 179 12 0 chr10 6232418 6232502 -139356786 - L1PA16 LINE L1 -2 6164 6080 2139 125 20 0 chr10 6232543 6232847 -139356441 + AluSx SINE Alu 1 310 -2 1666 176 42 3 chr10 6233093 6233377 -139355911 + AluSx SINE Alu 5 299 -13 2728 45 0 0 chr10 6233380 6233690 -139355598 + AluY SINE Alu 1 310 -1 312 204 66 109 chr10 6233938 6234026 -139355262 - LTR67 LTR ERVL -424 133 52 2451 63 17 0 chr10 6234026 6234328 -139354960 + AluY SINE Alu 1 307 -4 312 204 66 109 chr10 6234328 6234376 -139354912 - LTR67 LTR ERVL -505 52 3 35 71 0 0 chr10 6234411 6234481 -139354807 + AT_rich Low_complexity Low_complexity 1 70 0 198 0 0 0 chr10 6235953 6235975 -139353313 + (T)n Simple_repeat Simple_repeat 1 22 0 243 286 143 10 chr10 6236754 6236852 -139352436 - L2 LINE L2 0 3272 3162 2265 115 0 0 chr10 6240208 6240504 -139348784 + AluSx SINE Alu 1 296 -16 219 228 140 0 chr10 6240512 6240569 -139348719 - MIR SINE MIR -123 85 21 225 0 0 0 chr10 6240972 6240997 -139348291 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 351 286 31 0 chr10 6241027 6241125 -139348163 + MER3 DNA MER1_type 13 113 -96 254 245 64 21 chr10 6242409 6242503 -139346785 - MER5B DNA MER1_type 0 178 81 221 351 43 21 chr10 6242618 6242712 -139346576 + L3b LINE CR1 1478 1573 -10 191 323 104 0 chr10 6243611 6243707 -139345581 - MIR SINE MIR -49 213 108 2217 126 7 0 chr10 6244162 6244464 -139344824 + AluSx SINE Alu 1 304 -8 2042 133 7 3 chr10 6244466 6244760 -139344528 + AluSx SINE Alu 1 295 -17 1072 128 199 0 chr10 6246361 6246557 -139342731 - MER46A DNA MER2_type 0 236 2 1768 169 32 0 chr10 6248852 6249136 -139340152 + AluJb SINE Alu 1 293 -19 352 206 78 20 chr10 6250084 6250186 -139339102 + L1ME LINE L1 5709 5816 -305 360 284 97 92 chr10 6251045 6251349 -139337939 - L1MC4 LINE L1 -109 7933 7632 198 71 0 0 chr10 6251349 6251377 -139337911 + (CAT)n Simple_repeat Simple_repeat 1 28 0 360 284 97 92 chr10 6251377 6251710 -139337578 - L1MC4 LINE L1 -410 7632 7293 2209 102 30 0 chr10 6251873 6252168 -139337120 - AluSx SINE Alu -8 304 1 241 261 185 0 chr10 6252212 6252277 -139337011 - MER2 DNA MER2_type -1 344 268 1295 158 10 5 chr10 6252304 6252513 -139336775 - MER2 DNA MER2_type -135 210 1 2096 88 95 0 chr10 6253096 6253380 -139335908 + AluY SINE Alu 1 311 0 557 215 75 45 chr10 6253394 6253594 -139335694 - L1MC5 LINE L1 -44 7917 7712 276 165 198 44 chr10 6253600 6253691 -139335597 - MER106B DNA MER1_type -5 1054 950 324 222 0 14 chr10 6253704 6253776 -139335512 - MER106A DNA MER1_type -164 72 2 1856 82 106 0 chr10 6254243 6254528 -139334760 - AluY SINE Alu 0 312 1 2139 118 7 3 chr10 6256431 6256735 -139332553 + AluSx SINE Alu 1 305 -7 285 278 0 14 chr10 6257363 6257435 -139331853 + AluY SINE Alu 214 284 -17 2170 123 7 10 chr10 6257652 6257962 -139331326 - AluSx SINE Alu -1 311 3 1783 175 3 0 chr10 6258068 6258360 -139330928 + AluJb SINE Alu 6 298 -14 712 205 56 0 chr10 6259151 6259312 -139329976 - MIR SINE MIR -4 258 89 1652 181 0 7 chr10 6259399 6259675 -139329613 + AluJo SINE Alu 1 274 -38 1460 103 0 10 chr10 6260057 6260252 -139329036 + AluSx SINE Alu 1 193 -119 2101 135 0 0 chr10 6261110 6261414 -139327874 + AluJb SINE Alu 1 304 -8 1569 198 54 50 chr10 6261933 6262023 -139327265 + MLT1C LTR MaLR 1 89 -378 2229 107 3 3 chr10 6262023 6262331 -139326957 - AluSg SINE Alu -2 308 1 1569 198 54 50 chr10 6262331 6262705 -139326583 + MLT1C LTR MaLR 89 467 0 2049 211 67 19 chr10 6262781 6263301 -139325987 + L1MD2 LINE L1 5813 6357 -2 3229 149 19 21 chr10 6263973 6264527 -139324761 - Tigger4(Zombi) DNA MER2_type 0 2731 2177 1988 150 0 16 chr10 6264527 6264841 -139324447 + AluJb SINE Alu 1 309 -3 4728 129 25 16 chr10 6265211 6265960 -139323328 - Tigger4(Zombi) DNA MER2_type -769 1962 1207 779 201 7 0 chr10 6265960 6266099 -139323189 + AluJo SINE Alu 24 163 -149 830 87 0 0 chr10 6266103 6266206 -139323082 - FLAM_C SINE Alu -40 103 1 2274 155 27 12 chr10 6266207 6266613 -139322675 - Tigger4(Zombi) DNA MER2_type -2319 412 1 2394 97 0 0 chr10 6266633 6266933 -139322355 - AluSx SINE Alu -12 300 1 21 57 0 0 chr10 6267307 6267342 -139321946 + AT_rich Low_complexity Low_complexity 1 35 0 414 276 34 63 chr10 6267345 6267584 -139321704 + L1ME LINE L1 5496 5727 -394 2162 121 3 10 chr10 6267926 6268239 -139321049 - AluSx SINE Alu -1 311 1 507 126 53 0 chr10 6268244 6268339 -139320949 - L1PA13 LINE L1 0 6163 6064 23 33 0 0 chr10 6268701 6268731 -139320557 + GC_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr10 6269364 6269386 -139319902 + GC_rich Low_complexity Low_complexity 1 22 0 2213 101 3 29 chr10 6270934 6271250 -139318038 - AluSg SINE Alu -2 308 1 603 218 12 42 chr10 6271257 6271275 -139318013 - L1MA10 LINE L1 0 6334 6317 1833 229 62 29 chr10 6271275 6271822 -139317466 - L1ME1 LINE L1 -6 6160 5596 520 206 0 11 chr10 6271822 6271914 -139317374 - AluJb SINE Alu -17 295 205 33 0 0 0 chr10 6271916 6271949 -139317339 + AT_rich Low_complexity Low_complexity 1 33 0 2328 116 0 0 chr10 6271949 6272260 -139317028 - AluSx SINE Alu -1 311 1 1144 217 56 11 chr10 6272266 6272552 -139316736 - L1ME1 LINE L1 -565 5601 5303 2022 112 0 0 chr10 6272563 6272830 -139316458 + AluSx SINE Alu 9 275 -37 1934 194 35 28 chr10 6272869 6273351 -139315937 - L1ME1 LINE L1 -849 5297 4832 841 225 34 41 chr10 6273352 6273619 -139315669 + L1M4 LINE L1 4290 4554 -1592 355 67 0 0 chr10 6274421 6274500 -139314788 + Alu SINE Alu 241 319 0 221 344 65 42 chr10 6274627 6274842 -139314446 - L2 LINE L2 -551 2763 2544 197 264 99 22 chr10 6275196 6275287 -139314001 + L2 LINE L2 3154 3251 -21 1490 156 13 0 chr10 6275851 6276166 -139313122 + AluJo SINE Alu 55 372 0 377 248 9 9 chr10 6276347 6276460 -139312828 + L1MEd LINE L1 89 201 -6004 1136 199 44 17 chr10 6276460 6276757 -139312531 + L1MEd LINE L1 1849 2153 -4243 * 1354 234 37 23 chr10 6276756 6277188 -139312100 + L1M4 LINE L1 4214 4651 -1495 1684 154 50 18 chr10 6277191 6277471 -139311817 + AluJo SINE Alu 1 289 -23 308 56 33 89 chr10 6277471 6277561 -139311727 + (TTTAA)n Simple_repeat Simple_repeat 1 85 0 479 268 43 39 chr10 6277572 6277826 -139311462 + L1M4 LINE L1 4586 4840 -1306 708 287 87 53 chr10 6277841 6278347 -139310941 + L1MCc LINE L1 716 1238 -5185 2142 115 3 3 chr10 6278782 6279078 -139310210 - AluSx SINE Alu -16 296 1 183 265 157 20 chr10 6279156 6279258 -139310030 + L2 LINE L2 3155 3270 -2 2325 95 0 0 chr10 6279352 6279637 -139309651 + AluSc SINE Alu 1 285 -24 387 60 0 0 chr10 6279639 6279689 -139309599 + (CAAGG)n Simple_repeat Simple_repeat 2 51 0 778 93 0 0 chr10 6279807 6279904 -139309384 + AluS SINE Alu 2 98 -214 1418 80 0 6 chr10 6279905 6280080 -139309208 - AluSq SINE Alu -53 260 87 2406 95 0 0 chr10 6280834 6281138 -139308150 + AluSx SINE Alu 1 304 -8 288 326 30 30 chr10 6281177 6281309 -139307979 + MIR SINE MIR 20 151 -111 1944 143 0 29 chr10 6282387 6282695 -139306593 + AluJo SINE Alu 1 299 -13 1311 262 91 12 chr10 6283386 6283814 -139305474 - LTR40b LTR ERVL 0 462 1 2304 117 0 0 chr10 6284245 6284545 -139304743 - AluSx SINE Alu -12 300 1 1712 153 0 67 chr10 6285439 6285640 -139303648 - AluJo SINE Alu -19 293 119 2272 119 0 3 chr10 6285640 6285943 -139303345 + AluSx SINE Alu 1 302 -10 1712 153 0 67 chr10 6285943 6286055 -139303233 - AluJo SINE Alu -193 119 1 907 119 8 15 chr10 6287550 6287684 -139301604 + FLAM_C SINE Alu 1 133 0 248 239 0 45 chr10 6287850 6287917 -139301371 + G-rich Low_complexity Low_complexity 4 67 0 1890 171 0 3 chr10 6288168 6288472 -139300816 + AluSx SINE Alu 1 303 -9 512 275 108 12 chr10 6288607 6288847 -139300441 - L1MC4a LINE L1 -1910 5898 5636 2200 126 3 0 chr10 6288963 6289272 -139300016 + AluSx SINE Alu 1 310 -2 2281 125 0 0 chr10 6289281 6289584 -139299704 + AluSg SINE Alu 1 303 -7 2312 109 0 31 chr10 6289594 6289915 -139299373 + AluSx SINE Alu 1 311 -1 2434 96 0 0 chr10 6290540 6290841 -139298447 + AluSx SINE Alu 1 301 -11 2284 101 3 0 chr10 6291456 6291753 -139297535 + AluSp SINE Alu 1 298 -15 842 152 0 45 chr10 6292261 6292393 -139296895 + FLAM_C SINE Alu 1 126 -17 831 157 64 7 chr10 6292450 6292590 -139296698 + AluSq/x SINE Alu 1 148 -165 544 138 0 0 chr10 6292598 6292692 -139296596 + AluJ/FRAM SINE Alu 216 309 -3 677 189 0 0 chr10 6293327 6293433 -139295855 - FLAM_C SINE Alu -36 107 2 363 259 54 45 chr10 6294772 6294884 -139294404 - MIR3 SINE MIR -43 165 53 886 150 0 0 chr10 6294897 6295022 -139294266 + AluJo SINE Alu 3 130 -182 1960 149 17 7 chr10 6295022 6295311 -139293977 - AluSx SINE Alu -20 292 1 903 145 45 73 chr10 6295513 6295683 -139293605 - AluSg/x SINE Alu -18 294 128 2269 104 0 16 chr10 6295683 6295999 -139293289 - AluY SINE Alu 0 311 1 411 243 27 70 chr10 6296061 6296246 -139293042 - MLT1H LTR MaLR -266 283 107 193 245 20 20 chr10 6296334 6296383 -139292905 + L2 LINE L2 3262 3310 -3 535 144 72 0 chr10 6296481 6296578 -139292710 + L1PA16 LINE L1 6058 6161 -5 2283 104 3 0 chr10 6296750 6297039 -139292249 - AluSx SINE Alu -21 291 2 26 30 0 0 chr10 6297931 6297964 -139291324 + AT_rich Low_complexity Low_complexity 1 33 0 2295 107 0 0 chr10 6297987 6298285 -139291003 + AluSx SINE Alu 1 298 -14 1895 138 24 3 chr10 6299175 6299464 -139289824 + AluJb SINE Alu 1 295 -17 2330 102 0 0 chr10 6300026 6300319 -139288969 - AluSx SINE Alu -19 293 1 866 163 12 25 chr10 6301279 6301439 -139287849 + FRAM SINE Alu 2 159 -17 351 357 85 5 chr10 6301832 6302056 -139287232 + MIR SINE MIR 12 253 -9 386 238 69 10 chr10 6302226 6302327 -139286961 + MLT1L LTR MaLR 170 276 -339 1039 275 67 73 chr10 6302334 6303003 -139286285 - PABL_B LTR ERV1 -2 665 1 2441 109 0 0 chr10 6303620 6303932 -139285356 + AluSx SINE Alu 1 312 0 1739 158 4 7 chr10 6305291 6305564 -139283724 + AluJo SINE Alu 26 297 -15 275 246 115 71 chr10 6305841 6306093 -139283195 - HAL1 LINE L1 0 2507 2245 1709 134 19 11 chr10 6306274 6306542 -139282746 - AluJo SINE Alu -42 270 1 388 270 44 73 chr10 6306544 6306650 -139282638 - HAL1 LINE L1 -1120 1387 1288 2343 87 0 0 chr10 6306650 6306939 -139282349 + AluY SINE Alu 1 289 -22 388 270 44 73 chr10 6306939 6307036 -139282252 - HAL1 LINE L1 -1219 1288 1190 232 167 0 0 chr10 6307036 6307084 -139282204 - Alu SINE Alu 0 302 255 2273 97 0 0 chr10 6307220 6307509 -139281779 + AluY SINE Alu 1 289 -22 391 249 118 70 chr10 6307535 6307600 -139281688 - HAL1 LINE L1 -1246 1261 1201 1920 144 37 3 chr10 6307600 6307899 -139281389 - AluSx SINE Alu -3 309 1 391 249 118 70 chr10 6307899 6308037 -139281251 - HAL1 LINE L1 -1306 1201 1071 1649 93 19 5 chr10 6308037 6308252 -139281036 - AluSx SINE Alu -94 218 1 391 249 118 70 chr10 6308252 6308445 -139280843 - HAL1 LINE L1 -1436 1071 845 222 37 0 0 chr10 6308502 6308529 -139280759 + (CA)n Simple_repeat Simple_repeat 2 28 0 205 291 204 67 chr10 6308637 6309206 -139280082 + L2 LINE L2 1866 2546 -768 883 216 22 0 chr10 6309206 6309391 -139279897 - MER5A DNA MER1_type 0 189 1 205 291 204 67 chr10 6309391 6309508 -139279780 + L2 LINE L2 2546 2646 -668 626 168 62 62 chr10 6309514 6309675 -139279613 - AluJb SINE Alu -18 294 134 28 48 0 0 chr10 6309867 6309909 -139279379 + AT_rich Low_complexity Low_complexity 1 42 0 23 0 0 0 chr10 6311175 6311198 -139278090 + AT_rich Low_complexity Low_complexity 1 23 0 317 342 90 0 chr10 6311390 6311545 -139277743 + MIR SINE MIR 75 243 -19 311 283 91 0 chr10 6312121 6312220 -139277068 - L1ME LINE L1 -343 5778 5671 256 248 62 69 chr10 6312282 6312427 -139276861 + MER112 DNA MER1_type 66 209 -51 21 0 0 0 chr10 6312428 6312449 -139276839 + AT_rich Low_complexity Low_complexity 1 21 0 1510 151 120 8 chr10 6312456 6312714 -139276574 + AluSg1 SINE Alu 14 300 -9 2193 115 3 16 chr10 6312747 6313060 -139276228 + AluSx SINE Alu 1 309 -3 2018 142 0 29 chr10 6313473 6313782 -139275506 + AluSx SINE Alu 1 300 -12 2304 120 0 0 chr10 6314018 6314319 -139274969 - AluSx SINE Alu -11 301 1 792 254 65 65 chr10 6314324 6314408 -139274880 + L1MC4a LINE L1 5520 5603 -2205 1819 156 7 3 chr10 6314408 6314712 -139274576 + AluJb SINE Alu 1 305 0 792 254 65 65 chr10 6314712 6314965 -139274323 + L1MC4a LINE L1 5602 5858 -1950 312 291 156 33 chr10 6315033 6315261 -139274027 + L1MC4a LINE L1 5848 6047 -1761 1955 160 0 10 chr10 6315261 6315561 -139273727 - AluSx SINE Alu -13 299 3 312 291 156 33 chr10 6315561 6315754 -139273534 + L1MC4a LINE L1 6047 6321 -1487 1586 143 10 68 chr10 6316378 6316672 -139272616 + AluJb SINE Alu 17 293 -19 240 238 130 77 chr10 6316887 6317148 -139272140 + L1MC5 LINE L1 7303 7577 -384 915 262 23 0 chr10 6317657 6317871 -139271417 + MER58A DNA MER1_type 1 219 -5 428 289 78 8 chr10 6318206 6318334 -139270954 + L2 LINE L2 3161 3297 -16 2038 146 3 0 chr10 6318985 6319279 -139270009 + AluJo SINE Alu 11 305 -7 2378 108 0 3 chr10 6319328 6319635 -139269653 - AluSx SINE Alu -6 306 1 265 293 75 45 chr10 6320315 6320448 -139268840 - MIR3 SINE MIR -71 137 1 308 217 0 0 chr10 6320614 6320674 -139268614 + L1MB8 LINE L1 6101 6160 -18 2266 109 23 0 chr10 6321011 6321314 -139267974 + AluSx SINE Alu 1 310 -2 815 131 0 16 chr10 6321362 6321484 -139267804 + FLAM_C SINE Alu 9 128 -15 239 198 136 37 chr10 6322340 6322421 -139266867 - MIR SINE MIR -66 142 54 2169 115 10 0 chr10 6322559 6322855 -139266433 + AluSq SINE Alu 1 299 -14 396 280 10 0 chr10 6323189 6323289 -139265999 + MIR3 SINE MIR 8 108 -100 203 56 56 0 chr10 6323827 6323863 -139265425 + T-rich Low_complexity Low_complexity 3 40 0 2157 126 3 0 chr10 6324242 6324535 -139264753 + AluSx SINE Alu 1 294 -18 198 257 157 14 chr10 6325234 6325304 -139263984 + L2 LINE L2 3193 3272 0 366 271 90 23 chr10 6325359 6325532 -139263756 - MIR3 SINE MIR -64 144 6 3638 173 57 16 chr10 6326822 6327591 -139261697 + L1MC3 LINE L1 6967 7767 -18 1455 224 69 16 chr10 6327778 6327930 -139261358 - Charlie1 DNA MER1_type 0 2761 2619 2264 120 0 0 chr10 6327930 6328221 -139261067 - AluSx SINE Alu -21 291 1 1455 224 69 16 chr10 6328221 6328500 -139260788 - Charlie1 DNA MER1_type -142 2619 2307 646 263 72 0 chr10 6328503 6328697 -139260591 - Charlie1 DNA MER1_type -767 1994 1787 423 284 216 21 chr10 6332386 6332580 -139256708 + MIR SINE MIR 31 262 0 260 295 82 16 chr10 6333379 6333501 -139255787 + L1MB7 LINE L1 6046 6175 -9 366 250 117 51 chr10 6334565 6334761 -139254527 + MLT1A2 LTR MaLR 1 209 -156 1976 131 10 13 chr10 6335046 6335344 -139253944 - AluSx SINE Alu -15 297 1 326 356 108 16 chr10 6335412 6335718 -139253570 + L2 LINE L2 2862 3195 -118 2248 119 0 0 chr10 6337129 6337424 -139251864 - AluSx SINE Alu -17 295 1 262 287 41 49 chr10 6337648 6337770 -139251518 + MIR3 SINE MIR 1 121 -87 * 575 330 58 5 chr10 6337768 6337956 -139251332 + L3 LINE CR1 1379 1576 -1 1929 97 0 34 chr10 6338561 6338829 -139250459 + AluSx SINE Alu 49 307 -5 260 293 104 47 chr10 6338937 6339043 -139250245 + MIR SINE MIR 34 145 -63 2431 215 11 70 chr10 6339082 6339652 -139249636 + L1M4 LINE L1 2319 2835 -3311 2126 151 0 0 chr10 6339652 6339951 -139249337 + AluSx SINE Alu 3 301 -11 2431 215 11 70 chr10 6339951 6340134 -139249154 + L1M4 LINE L1 2835 3027 -3119 180 0 0 0 chr10 6340134 6340154 -139249134 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 2218 109 3 10 chr10 6340159 6340461 -139248827 + AluSx SINE Alu 1 300 -12 2058 126 3 7 chr10 6341863 6342189 -139247099 - AluSx SINE Alu 0 312 1 24 0 0 0 chr10 6342221 6342245 -139247043 + AT_rich Low_complexity Low_complexity 1 24 0 27 49 0 0 chr10 6342553 6342594 -139246694 + AT_rich Low_complexity Low_complexity 1 41 0 31 0 0 0 chr10 6342696 6342727 -139246561 + AT_rich Low_complexity Low_complexity 1 31 0 750 148 0 41 chr10 6342727 6342849 -139246439 - FLAM_C SINE Alu -25 118 2 1632 141 87 7 chr10 6343091 6343368 -139245920 + AluJo SINE Alu 1 299 -13 2351 77 7 0 chr10 6343795 6344092 -139245196 + AluSp SINE Alu 1 299 -14 327 125 0 0 chr10 6344695 6344751 -139244537 + Alu SINE Alu 1 56 -247 1164 138 0 0 chr10 6344771 6344930 -139244358 + AluSg/x SINE Alu 115 273 -39 23 97 0 0 chr10 6345034 6345106 -139244182 + AT_rich Low_complexity Low_complexity 1 72 0 218 337 36 12 chr10 6345277 6345360 -139243928 - L3b LINE CR1 -95 1488 1404 2225 129 13 0 chr10 6345560 6345869 -139243419 + AluSq SINE Alu 1 313 0 2093 98 56 3 chr10 6345966 6346251 -139243037 + AluSq SINE Alu 1 300 -13 2227 142 0 0 chr10 6346299 6346609 -139242679 - AluSx SINE Alu -2 310 1 313 71 0 0 chr10 6347064 6347106 -139242182 + 5S rRNA rRNA 1 42 -79 257 0 30 0 chr10 6348090 6348123 -139241165 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1889 176 22 35 chr10 6348628 6348714 -139240574 + MLT1A1 LTR MaLR 1 87 -278 2183 131 3 0 chr10 6348714 6349012 -139240276 + AluSx SINE Alu 1 299 -13 1889 176 22 35 chr10 6349012 6349295 -139239993 + MLT1A1 LTR MaLR 87 365 0 180 218 195 46 chr10 6350690 6350777 -139238511 - MER5B DNA MER1_type -1 177 78 429 304 22 5 chr10 6351489 6351756 -139237532 + MLT1J1 LTR MaLR 37 336 -110 269 253 43 10 chr10 6351773 6351894 -139237394 + MLT1J1 LTR MaLR 325 441 -5 22 0 0 0 chr10 6352044 6352066 -139237222 + AT_rich Low_complexity Low_complexity 1 22 0 420 265 96 42 chr10 6352829 6353008 -139236280 - MIR3 SINE MIR -51 211 3 194 0 39 0 chr10 6354087 6354113 -139235175 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1930 130 3 18 chr10 6354115 6354400 -139234888 - AluSx SINE Alu -31 281 1 2244 83 3 10 chr10 6355512 6355800 -139233488 + AluSx SINE Alu 1 286 -26 198 296 111 68 chr10 6356300 6356462 -139232826 + MIR SINE MIR 74 242 -20 232 221 14 64 chr10 6356856 6356996 -139232292 + C-rich Low_complexity Low_complexity 2 134 0 32 0 0 0 chr10 6357104 6357136 -139232152 + GC_rich Low_complexity Low_complexity 1 32 0 227 182 26 52 chr10 6358006 6358083 -139231205 + (CCCGG)n Simple_repeat Simple_repeat 1 75 0 25 31 0 0 chr10 6358148 6358180 -139231108 + GC_rich Low_complexity Low_complexity 1 32 0 289 237 166 22 chr10 6358755 6358894 -139230394 - L1MD2 LINE L1 -148 6211 6053 2211 81 0 39 chr10 6359741 6360048 -139229240 + AluSq SINE Alu 4 298 -15 442 261 62 41 chr10 6360173 6360368 -139228920 + MIR SINE MIR 61 259 -3 2221 116 0 0 chr10 6360810 6361103 -139228185 - AluSx SINE Alu -8 304 12 363 302 116 32 chr10 6361696 6361885 -139227403 + L1 LINE L1 5191 5395 -751 471 346 77 58 chr10 6361914 6361947 -139227341 - L2 LINE L2 -5 3267 3236 2460 69 0 7 chr10 6361947 6362252 -139227036 + AluY SINE Alu 7 309 -2 471 346 77 58 chr10 6362252 6362646 -139226642 - L2 LINE L2 -36 3236 2832 2361 111 0 9 chr10 6362658 6362974 -139226314 - AluSq SINE Alu 0 313 1 334 376 16 11 chr10 6362980 6363166 -139226122 - L2 LINE L2 -766 2548 2362 411 307 102 28 chr10 6363511 6363726 -139225562 + MIR SINE MIR 16 246 -16 1861 142 69 0 chr10 6363828 6364103 -139225185 + AluSx SINE Alu 1 294 -18 227 83 0 42 chr10 6364919 6364967 -139224321 + (TTTTTG)n Simple_repeat Simple_repeat 3 48 0 1326 98 0 0 chr10 6364997 6365161 -139224127 - AluSg SINE Alu -146 164 1 39 0 0 37 chr10 6365336 6365352 -139223936 + AT_rich Low_complexity Low_complexity 1 16 -36 2050 96 0 41 chr10 6365352 6365436 -139223852 + AluSc SINE Alu 1 87 -222 2449 71 7 0 chr10 6365436 6365733 -139223555 + AluY SINE Alu 1 299 -12 2050 96 0 41 chr10 6365733 6365941 -139223347 + AluSc SINE Alu 87 281 -28 390 21 0 0 chr10 6365941 6365988 -139223300 + (TA)n Simple_repeat Simple_repeat 2 48 0 39 0 0 37 chr10 6365988 6366024 -139223264 + AT_rich Low_complexity Low_complexity 14 52 0 975 135 0 0 chr10 6366324 6366457 -139222831 + FLAM_C SINE Alu 1 133 0 2976 88 65 18 chr10 6366550 6366994 -139222294 + MER4C LTR ERV1 1 465 0 2115 119 3 49 chr10 6367219 6367546 -139221742 - AluSx SINE Alu 0 312 1 2256 103 20 0 chr10 6367939 6368231 -139221057 - AluSx SINE Alu -14 298 1 1553 115 51 0 chr10 6368611 6368845 -139220443 - AluSg SINE Alu -4 306 61 210 179 21 53 chr10 6369016 6369111 -139220177 + (TTTG)n Simple_repeat Simple_repeat 3 94 0 1782 127 6 47 chr10 6369394 6369716 -139219572 - AluSx SINE Alu -3 309 1 2112 99 20 0 chr10 6370128 6370420 -139218868 - AluSx SINE Alu -14 298 1 2026 109 41 0 chr10 6370801 6371094 -139218194 - AluSg SINE Alu -5 305 1 2058 134 0 0 chr10 6372199 6372505 -139216783 + AluSx SINE Alu 1 306 -6 222 161 36 36 chr10 6372704 6372760 -139216528 + T-rich Low_complexity Low_complexity 3 58 0 2163 85 0 0 chr10 6373428 6373729 -139215559 + AluSx SINE Alu 1 301 0 1265 111 0 0 chr10 6373729 6373901 -139215387 + AluSg/x SINE Alu 129 300 -10 681 280 14 14 chr10 6374031 6374242 -139215046 + L2 LINE L2 2999 3209 -104 24 0 0 0 chr10 6374256 6374280 -139215008 + AT_rich Low_complexity Low_complexity 1 24 0 259 258 15 0 chr10 6374314 6374380 -139214908 - MIR SINE MIR -17 245 179 2073 105 7 0 chr10 6375425 6375711 -139213577 + AluSc SINE Alu 3 290 -19 308 184 53 13 chr10 6376032 6376108 -139213180 - L1ME4a LINE L1 -45 6076 5998 1925 121 3 48 chr10 6376138 6376283 -139213005 + AluSx SINE Alu 1 126 -186 2151 100 0 3 chr10 6376283 6376583 -139212705 + AluY SINE Alu 2 300 -11 1925 121 3 48 chr10 6376583 6376751 -139212537 + AluSx SINE Alu 126 300 -12 2312 73 0 0 chr10 6376756 6377045 -139212243 + AluY SINE Alu 1 289 -22 1992 130 7 0 chr10 6377114 6377415 -139211873 - AluSx SINE Alu -9 303 1 182 235 82 71 chr10 6377552 6377650 -139211638 - L2 LINE L2 -1313 2001 1903 2113 85 3 0 chr10 6378184 6378507 -139210781 - AluSp SINE Alu 0 324 1 1724 129 71 4 chr10 6378927 6379207 -139210081 + AluJo SINE Alu 1 299 -13 212 236 145 21 chr10 6379361 6379531 -139209757 - L2 LINE L2 -1438 1876 1638 755 106 89 0 chr10 6379672 6379795 -139209493 + L1PA16 LINE L1 6024 6157 -9 541 259 73 0 chr10 6379943 6380148 -139209140 - L2 LINE L2 -1794 1520 1301 249 254 56 0 chr10 6380189 6380260 -139209028 - MER5A DNA MER1_type -53 136 62 686 233 14 0 chr10 6380274 6380420 -139208868 - L1MA10 LINE L1 -1 6333 6186 1273 94 124 0 chr10 6380422 6380624 -139208664 + MER30 DNA MER1_type 4 230 0 1338 132 14 7 chr10 6380658 6380864 -139208424 - LTR12 LTR ERV1 -133 581 276 357 204 45 68 chr10 6380864 6380996 -139208292 - LTR30 LTR ERV1 -71 723 552 289 93 0 0 chr10 6380996 6381039 -139208249 - pTR5 LTR ERV1 -433 2005 1963 * 1031 77 8 0 chr10 6381022 6381152 -139208136 - LTR12 LTR ERV1 -531 183 53 250 269 0 0 chr10 6381152 6381204 -139208084 - LTR30 LTR ERV1 -670 52 1 5642 92 8 12 chr10 6381209 6381982 -139207306 - HERV9 LTR ERV1 -4 8395 7626 2063 124 77 95 chr10 6381980 6382902 -139206386 - HERV17 LTR ERV1 -5156 1740 703 * 6308 91 8 11 chr10 6382903 6383771 -139205517 - HERV17 LTR ERV1 -3455 4944 4080 541 82 61 10 chr10 6383778 6383876 -139205412 - HERV17 LTR ERV1 -5260 3139 3037 1724 153 12 41 chr10 6384009 6384080 -139205208 + MER46B DNA MER2_type 30 102 -2629 2299 84 0 13 chr10 6384080 6384389 -139204899 + AluY SINE Alu 1 305 -6 1724 153 12 41 chr10 6384389 6384657 -139204631 + MER46B DNA MER2_type 102 234 -2 1920 120 10 19 chr10 6384839 6385147 -139204141 + AluSx SINE Alu 1 305 -7 349 252 61 46 chr10 6386578 6386709 -139202579 + L2 LINE L2 3181 3313 0 368 191 95 87 chr10 6386985 6386999 -139202289 + L1MC4 LINE L1 1978 1990 -6332 1983 130 3 0 chr10 6386999 6387292 -139201996 + AluSx SINE Alu 1 294 -18 368 191 95 87 chr10 6387292 6387403 -139201885 + L1MC4 LINE L1 1990 6982 -1340 180 176 0 0 chr10 6388892 6388926 -139200362 + GA-rich Low_complexity Low_complexity 2 35 0 218 183 134 12 chr10 6389335 6389417 -139199871 + SUBTEL_sa Satellite Satellite 11 102 -72 285 167 0 0 chr10 6390127 6390181 -139199107 + (CA)n Simple_repeat Simple_repeat 1 54 0 520 253 66 62 chr10 6390394 6390651 -139198637 + L1 LINE L1 2266 2523 -3623 706 302 120 40 chr10 6390732 6391232 -139198056 + L1 LINE L1 2632 3171 -2975 2331 63 0 0 chr10 6392180 6392467 -139196821 - AluSq SINE Alu -9 304 18 947 97 14 0 chr10 6392500 6392644 -139196644 + (TTTC)n Simple_repeat Simple_repeat 1 146 0 2025 114 0 0 chr10 6392644 6392925 -139196363 - AluSq SINE Alu -32 281 1 23 0 0 0 chr10 6393110 6393133 -139196155 + AT_rich Low_complexity Low_complexity 1 23 0 2099 121 7 0 chr10 6393278 6393584 -139195704 + AluSx SINE Alu 1 308 -4 1728 153 0 7 chr10 6393824 6394099 -139195189 - AluJb SINE Alu -26 286 14 430 305 67 22 chr10 6394592 6394815 -139194473 - MIR SINE MIR -28 234 2 324 339 26 0 chr10 6394949 6395064 -139194224 - MIR SINE MIR -12 250 133 467 240 71 19 chr10 6396382 6396536 -139192752 + HERV16 LTR ERVL 153 314 -4682 908 124 7 0 chr10 6396540 6396677 -139192611 + AluSg/x SINE Alu 158 295 -17 499 326 127 17 chr10 6396715 6397034 -139192254 - HERVL LTR ERVL -2096 2900 2617 1916 118 14 0 chr10 6397034 6397342 -139191946 + AluSp SINE Alu 1 312 0 499 326 127 17 chr10 6397342 6397537 -139191751 - HERVL LTR ERVL -2379 2617 2323 1262 265 7 0 chr10 6397554 6397841 -139191447 + MER58B DNA MER1_type 15 303 -38 677 298 121 46 chr10 6397852 6397918 -139191370 - HERVL LTR ERVL -2668 2328 2268 2119 115 3 0 chr10 6397918 6398223 -139191065 - AluSx SINE Alu -6 306 1 677 298 121 46 chr10 6398223 6398502 -139190786 - HERVL LTR ERVL -2728 2268 1957 207 0 0 0 chr10 6398593 6398616 -139190672 + (TTA)n Simple_repeat Simple_repeat 2 24 0 2097 111 0 0 chr10 6398618 6398898 -139190390 - AluSx SINE Alu -32 280 1 358 164 41 82 chr10 6399379 6399525 -139189763 + (GAGTG)n Simple_repeat Simple_repeat 4 143 0 225 0 0 0 chr10 6399709 6399734 -139189554 + (A)n Simple_repeat Simple_repeat 1 25 0 276 198 23 93 chr10 6399738 6399824 -139189464 - L1ME3A LINE L1 -123 6047 5968 1578 252 67 40 chr10 6399892 6400654 -139188634 - L1ME3A LINE L1 -214 5956 5172 1524 105 5 5 chr10 6400651 6400870 -139188418 + L1PA14 LINE L1 5820 6038 -123 * 1055 96 0 0 chr10 6400873 6401009 -139188279 + AluSq/x SINE Alu 1 136 -176 2116 124 0 6 chr10 6401009 6401323 -139187965 + AluSx SINE Alu 1 312 0 796 123 22 0 chr10 6401325 6401463 -139187825 + L1PA14 LINE L1 6020 6160 -1 2350 62 7 3 chr10 6401469 6401776 -139187512 + AluY SINE Alu 1 308 -3 367 304 0 0 chr10 6401788 6401900 -139187388 - L1ME3A LINE L1 -988 5158 5047 795 253 136 8 chr10 6401902 6402247 -139187041 - LTR50 LTR ERVL 0 795 326 3774 92 0 25 chr10 6402260 6402784 -139186504 - MER9 LTR ERVK 0 511 1 576 251 111 6 chr10 6402809 6402980 -139186308 - LTR50 LTR ERVL -598 197 9 1854 162 3 0 chr10 6402986 6403282 -139186006 - AluSx SINE Alu -15 297 1 1115 277 112 15 chr10 6403285 6403892 -139185396 - L1ME3A LINE L1 -1097 5049 4384 * 3781 249 66 60 chr10 6403879 6404365 -139184923 - L1MC4 LINE L1 0 8042 7561 2344 85 0 0 chr10 6404365 6404672 -139184616 - AluSx SINE Alu 0 312 6 3781 249 66 60 chr10 6404672 6405185 -139184103 - L1MC4 LINE L1 -481 7561 7053 1652 153 10 35 chr10 6405185 6405499 -139183789 - AluJo SINE Alu 0 312 7 3781 249 66 60 chr10 6405499 6406001 -139183287 - L1MC4 LINE L1 -989 7053 6527 564 257 39 45 chr10 6406001 6406180 -139183108 - MER45A DNA AcHobo 0 178 1 3781 249 66 60 chr10 6406180 6406216 -139183072 - L1MC4 LINE L1 -1515 6527 6493 2789 209 80 15 chr10 6406266 6406920 -139182368 - MER45B DNA AcHobo -68 972 277 488 213 37 81 chr10 6406931 6406969 -139182319 - MER45B DNA AcHobo -895 145 107 2501 59 0 0 chr10 6406969 6407274 -139182014 + AluSx SINE Alu 1 305 -7 488 213 37 81 chr10 6407274 6407371 -139181917 - MER45B DNA AcHobo -933 107 16 34 0 0 22 chr10 6407647 6407666 -139181622 + AT_rich Low_complexity Low_complexity 1 19 -25 1759 123 90 0 chr10 6407666 6407943 -139181345 + AluSg SINE Alu 1 302 -8 34 0 0 22 chr10 6407943 6407968 -139181320 + AT_rich Low_complexity Low_complexity 19 44 0 1897 154 0 7 chr10 6408036 6408342 -139180946 + AluJb SINE Alu 1 304 -8 301 213 0 16 chr10 6408350 6408411 -139180877 - L1ME3A LINE L1 -1771 4375 4316 624 188 107 0 chr10 6408641 6408753 -139180535 - FLAM_A SINE Alu -8 125 2 2133 92 0 7 chr10 6409146 6409474 -139179814 + AluSq SINE Alu 2 327 0 444 309 116 77 chr10 6409647 6410237 -139179051 + L2 LINE L2 2670 3271 -1 222 319 14 14 chr10 6410855 6410927 -139178361 + MIR SINE MIR 36 107 -155 303 404 7 7 chr10 6411246 6411382 -139177906 - L2 LINE L2 -4 3268 3133 2267 80 3 7 chr10 6411708 6412010 -139177278 + AluSx SINE Alu 1 301 -11 1387 114 0 10 chr10 6412299 6412501 -139176787 - AluSg/x SINE Alu -8 304 105 1686 194 14 81 chr10 6412865 6413221 -139176067 + MLT1B LTR MaLR 1 326 -64 1632 171 24 0 chr10 6413221 6413519 -139175769 + AluJo SINE Alu 1 305 -7 1686 194 14 81 chr10 6413519 6413580 -139175708 + MLT1B LTR MaLR 326 390 0 1310 224 88 42 chr10 6413582 6413861 -139175427 - Charlie4a DNA MER1_type -1458 503 193 1676 160 38 0 chr10 6413861 6414154 -139175134 + AluJb SINE Alu 1 304 -8 1310 224 88 42 chr10 6414154 6414330 -139174958 - Charlie4a DNA MER1_type -1768 193 27 1304 95 53 0 chr10 6414922 6415111 -139174177 - AluSg/x SINE Alu -15 297 99 2098 208 69 53 chr10 6415960 6416135 -139173153 - L1MD2 LINE L1 -24 6335 6164 261 0 0 0 chr10 6416135 6416164 -139173124 + (TG)n Simple_repeat Simple_repeat 2 30 0 2098 208 69 53 chr10 6416164 6416391 -139172897 - L1MD2 LINE L1 -195 6164 5942 2563 111 24 77 chr10 6416391 6416518 -139172770 + MSTA LTR MaLR 1 133 -295 2149 94 43 0 chr10 6416518 6416817 -139172471 - AluSx SINE Alu 0 312 1 2563 111 24 77 chr10 6416817 6417141 -139172147 + MSTA LTR MaLR 133 428 0 2098 208 69 53 chr10 6417141 6417218 -139172070 - L1MD2 LINE L1 -417 5942 5868 2084 105 0 3 chr10 6417218 6417512 -139171776 - AluSc SINE Alu -16 293 1 2098 208 69 53 chr10 6417512 6417569 -139171719 - L1MD2 LINE L1 -491 5868 5813 2031 113 20 3 chr10 6417569 6417871 -139171417 - AluSg SINE Alu -3 307 1 2098 208 69 53 chr10 6417871 6417956 -139171332 - L1MD2 LINE L1 -546 5813 5701 322 226 137 20 chr10 6418002 6418104 -139171184 + L2 LINE L2 3159 3272 0 441 350 96 8 chr10 6418129 6418369 -139170919 + MIR SINE MIR 1 261 -1 383 253 174 47 chr10 6419760 6420013 -139169275 + MLT1J2 LTR MaLR 20 304 -146 3071 87 4 24 chr10 6420102 6420553 -139168735 - L1PB1 LINE L1 0 6151 5710 432 254 61 9 chr10 6420683 6420797 -139168491 - MLT1J LTR MaLR -368 143 24 1223 137 0 0 chr10 6421255 6421430 -139167858 - FAM SINE Alu 0 175 1 2280 98 0 7 chr10 6422268 6422564 -139166724 - AluSq SINE Alu -19 294 1 621 132 0 0 chr10 6422769 6422860 -139166428 - MLT2A2 LTR ERVL -147 306 216 2534 150 17 2 chr10 6422932 6423338 -139165950 + LTR45B LTR ERV1 3 414 -75 2014 222 12 20 chr10 6423370 6423860 -139165428 - L1MCa LINE L1 -3388 3176 2691 3398 169 30 14 chr10 6423865 6424521 -139164767 - L1MB4 LINE L1 0 6180 5514 2273 124 3 0 chr10 6424522 6424829 -139164459 - AluSq SINE Alu -5 308 1 2508 145 15 0 chr10 6424849 6425255 -139164033 - L1MB1 LINE L1 -5 6163 5752 2458 79 0 0 chr10 6425269 6425573 -139163715 - AluY SINE Alu -7 304 1 1527 180 29 26 chr10 6425573 6425663 -139163625 - L1MCa LINE L1 -3948 2616 2528 2090 154 0 0 chr10 6425663 6425974 -139163314 - AluSx SINE Alu -1 311 1 1527 180 29 26 chr10 6425974 6426301 -139162987 - L1MCa LINE L1 -4036 2528 2273 2023 151 3 66 chr10 6426304 6426382 -139162906 + MER7A DNA MER2_type 7 88 -2950 225 0 0 0 chr10 6426382 6426407 -139162881 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 1876 151 0 11 chr10 6426407 6426686 -139162602 - AluSx SINE Alu -36 276 1 2023 151 3 66 chr10 6426686 6426971 -139162317 + MER7A DNA MER2_type 86 346 0 1809 158 61 24 chr10 6426971 6427499 -139161789 - L1MCa LINE L1 -4290 2274 1767 13080 26 1 0 chr10 6427499 6429774 -139159514 - L1PA3 LINE L1 0 6155 3880 2296 117 0 16 chr10 6429783 6430100 -139159188 - AluSx SINE Alu 0 312 1 1809 158 61 24 chr10 6430100 6430297 -139158991 - L1MCa LINE L1 -4804 1760 1378 1904 141 48 14 chr10 6430580 6430871 -139158417 + AluSx SINE Alu 1 301 -11 2324 120 0 0 chr10 6431242 6431550 -139157738 - AluSx SINE Alu -4 308 1 2588 63 0 16 chr10 6431569 6431885 -139157403 - AluY SINE Alu 0 311 1 2055 135 0 0 chr10 6432639 6432942 -139156346 - AluSx SINE Alu 0 303 1 2868 78 14 0 chr10 6433561 6433920 -139155368 - THE1B LTR MaLR 0 364 1 3788 208 97 39 chr10 6434051 6434512 -139154776 - L1MCa LINE L1 -4850 1195 762 2204 93 0 14 chr10 6434512 6434822 -139154466 - AluSq SINE Alu 0 306 1 3788 208 97 39 chr10 6434822 6435483 -139153805 - L1MCa LINE L1 -5283 762 7 236 30 30 0 chr10 6435495 6435528 -139153760 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 4479 104 22 2 chr10 6435655 6436277 -139153011 - MER41B LTR ERV1 0 635 1 1678 174 41 0 chr10 6437669 6437962 -139151326 - AluJo SINE Alu -7 305 1 280 325 8 8 chr10 6438994 6439120 -139150168 + L2 LINE L2 2947 3072 -200 252 0 0 0 chr10 6439265 6439293 -139149995 + (T)n Simple_repeat Simple_repeat 1 28 0 303 322 51 17 chr10 6439552 6439670 -139149618 + L2 LINE L2 3138 3259 -13 2271 123 0 19 chr10 6441341 6441657 -139147631 - AluSx SINE Alu -2 310 1 2535 77 7 0 chr10 6441666 6441976 -139147312 - AluSx SINE Alu 0 312 1 342 67 0 0 chr10 6442033 6442046 -139147242 + (CA)n Simple_repeat Simple_repeat 1 58 0 342 67 0 0 chr10 6442046 6442091 -139147197 + (CA)n Simple_repeat Simple_repeat 2 46 0 193 304 81 47 chr10 6442175 6442323 -139146965 - MIR3 SINE MIR -15 193 41 2180 92 44 0 chr10 6442830 6443125 -139146163 + AluSg SINE Alu 2 309 -1 417 265 158 15 chr10 6443154 6443350 -139145938 + MLT1J2 LTR MaLR 111 334 -116 1074 112 0 7 chr10 6443805 6443948 -139145340 - AluSq/x SINE Alu -162 151 10 1057 178 108 91 chr10 6443982 6444268 -139145020 - AluJo SINE Alu -11 301 11 21 0 0 0 chr10 6444277 6444298 -139144990 + AT_rich Low_complexity Low_complexity 1 21 0 802 125 0 76 chr10 6444304 6444448 -139144840 - FLAM_C SINE Alu 0 143 11 1203 169 105 92 chr10 6444482 6444777 -139144511 - AluJo SINE Alu -13 299 1 565 299 35 53 chr10 6444962 6445280 -139144008 - L1MEd LINE L1 -5397 722 411 901 209 0 0 chr10 6445322 6445494 -139143794 - FAM SINE Alu -3 172 1 1345 225 55 55 chr10 6446170 6446592 -139142696 + MLT2C2 LTR ERVL 1 422 -42 338 105 0 18 chr10 6446604 6446661 -139142627 + (CA)n Simple_repeat Simple_repeat 2 57 0 277 57 0 0 chr10 6446661 6446696 -139142592 + MLT2D LTR ERVL 367 401 -13 618 120 17 8 chr10 6446796 6446913 -139142375 + CT-rich Low_complexity Low_complexity 2 119 0 1936 178 62 11 chr10 6447064 6447435 -139141853 + MSTD LTR MaLR 7 396 0 2184 122 0 10 chr10 6447527 6447831 -139141457 + AluSx SINE Alu 1 301 -11 652 218 40 111 chr10 6448198 6448578 -139140710 + L1MC5 LINE L1 7340 7692 -269 370 132 0 0 chr10 6448579 6448632 -139140656 + Alu SINE Alu 2 54 -248 1735 133 0 49 chr10 6448633 6448918 -139140370 + AluSx SINE Alu 12 282 -30 509 268 82 10 chr10 6448952 6449146 -139140142 + L1MC5 LINE L1 7678 7885 -76 2184 114 16 0 chr10 6450768 6451074 -139138214 + AluSx SINE Alu 1 311 -1 3080 248 78 29 chr10 6451729 6452726 -139136562 + MER97b DNA MER1_type? 1 1046 -7 291 362 60 0 chr10 6452937 6453086 -139136202 + L2 LINE L2 3114 3271 -1 866 277 74 38 chr10 6453580 6454053 -139135235 - L1ME4a LINE L1 -25 6096 5607 819 70 53 0 chr10 6454575 6454689 -139134599 - MER41A LTR ERV1 0 554 435 248 218 39 26 chr10 6454693 6454771 -139134517 - L1MC5 LINE L1 -519 7442 7364 2105 131 13 7 chr10 6454776 6455082 -139134206 - AluSx SINE Alu -4 308 1 330 305 135 10 chr10 6455448 6455648 -139133640 + LTR16A LTR ERVL 1 225 -225 1927 134 62 0 chr10 6455767 6456059 -139133229 - AluSx SINE Alu -2 310 1 199 206 0 0 chr10 6458374 6458408 -139130880 - L2 LINE L2 -49 3264 3231 3182 149 28 0 chr10 6458408 6458917 -139130371 + L1PB4 LINE L1 5593 6115 -41 35 63 0 0 chr10 6458930 6458993 -139130295 + AT_rich Low_complexity Low_complexity 1 63 0 2129 125 3 10 chr10 6459213 6459516 -139129772 + AluJb SINE Alu 1 301 -11 1353 193 120 7 chr10 6459746 6460021 -139129267 - AluJb SINE Alu -6 306 1 265 231 39 0 chr10 6460251 6460303 -139128985 - MLT1K LTR MaLR -357 231 178 286 322 80 75 chr10 6460478 6460931 -139128357 + L2 LINE L2 449 903 -2411 190 324 66 81 chr10 6460934 6461070 -139128218 + L2 LINE L2 1089 1222 -2092 936 311 97 40 chr10 6461152 6462331 -139126957 + L2 LINE L2 2056 3308 -5 1307 201 21 49 chr10 6462417 6462705 -139126583 - MLT2B1 LTR ERVL -8 512 233 1390 198 52 7 chr10 6463004 6463292 -139125996 + L1M3 LINE L1 5443 5743 -437 2605 145 9 53 chr10 6463292 6463727 -139125561 + L1MB3 LINE L1 5679 6089 -94 2076 124 0 10 chr10 6463727 6464026 -139125262 - AluSx SINE Alu -16 296 1 2605 145 9 53 chr10 6464026 6464115 -139125173 + L1MB3 LINE L1 6089 6180 -3 1778 170 3 14 chr10 6464266 6464560 -139124728 - AluSx SINE Alu -21 291 1 371 289 108 49 chr10 6465135 6465404 -139123884 + MER109 Unknown Unknown 70 322 -2110 2311 96 11 20 chr10 6465404 6465759 -139123529 + L1PA10 LINE L1 5817 6168 0 371 289 108 49 chr10 6465759 6465847 -139123441 + MER109 Unknown Unknown 322 779 -1653 235 286 12 36 chr10 6465931 6466015 -139123273 + MER109 Unknown Unknown 536 617 -1815 225 200 0 20 chr10 6465996 6466046 -139123242 - MER109 Unknown Unknown -1778 654 606 * 2604 217 65 74 chr10 6466199 6467081 -139122207 + MER109 Unknown Unknown 535 1408 -1024 209 276 0 0 chr10 6468306 6468364 -139120924 + T-rich Low_complexity Low_complexity 2 59 0 697 144 17 8 chr10 6468969 6469087 -139120201 - FLAM_C SINE Alu -18 125 7 1387 140 4 13 chr10 6469216 6469445 -139119843 - AluJb SINE Alu 0 312 86 2295 58 0 42 chr10 6469749 6470058 -139119230 - AluY SINE Alu -15 296 1 387 244 151 8 chr10 6470076 6470195 -139119093 + MER5B DNA MER1_type 1 136 -42 259 152 0 22 chr10 6470300 6470346 -139118942 + MER20 DNA MER1_type 100 144 -75 495 167 0 0 chr10 6470346 6470436 -139118852 + GA-rich Low_complexity Low_complexity 1 90 0 262 146 83 0 chr10 6470436 6470484 -139118804 - AluJ/FRAM SINE Alu -20 282 231 1405 195 54 41 chr10 6470600 6470969 -139118319 + MLT1A2 LTR MaLR 1 374 0 2085 124 0 7 chr10 6471170 6471482 -139117806 + AluSx SINE Alu 1 312 0 1334 146 24 0 chr10 6471708 6471920 -139117368 + MER20 DNA MER1_type 1 217 -2 186 368 105 0 chr10 6471950 6472064 -139117224 - MIR SINE MIR -77 185 60 257 206 0 44 chr10 6472758 6472809 -139116479 - MLT2B1 LTR ERVL 0 520 471 2325 120 52 14 chr10 6472809 6473158 -139116130 - THE1B LTR MaLR 0 364 3 257 206 0 44 chr10 6473158 6473174 -139116114 - MLT2B1 LTR ERVL -49 471 456 1350 201 99 43 chr10 6473227 6473623 -139115665 - MLT2B1 LTR ERVL -37 377 4 936 177 6 6 chr10 6473765 6473929 -139115359 + MER3 DNA MER1_type 41 204 -5 480 231 0 0 chr10 6474162 6474266 -139115022 - L2 LINE L2 0 3272 3169 189 286 91 0 chr10 6474360 6474437 -139114851 - L2 LINE L2 -42 3271 3188 312 291 64 71 chr10 6474492 6474528 -139114760 - MIR SINE MIR -75 187 152 2185 110 7 7 chr10 6474528 6474827 -139114461 - AluSg SINE Alu -11 299 1 312 291 64 71 chr10 6474827 6474931 -139114357 - MIR SINE MIR -110 152 48 237 98 0 0 chr10 6475627 6475668 -139113620 + (TTTC)n Simple_repeat Simple_repeat 1 41 0 1578 163 64 34 chr10 6475672 6475695 -139113593 - AluJb SINE Alu -8 304 283 437 0 0 19 chr10 6475695 6475749 -139113539 + (TCTCC)n Simple_repeat Simple_repeat 2 54 0 1578 163 64 34 chr10 6475749 6476020 -139113268 - AluJb SINE Alu -29 283 1 1232 185 121 14 chr10 6476020 6476301 -139112987 - AluJo SINE Alu -1 311 1 22 35 0 0 chr10 6476499 6476528 -139112760 + AT_rich Low_complexity Low_complexity 1 29 0 431 280 159 5 chr10 6476698 6476887 -139112401 + MLT1I LTR MaLR 186 403 -6 180 191 132 29 chr10 6476957 6477025 -139112263 + L3b LINE CR1 1263 1337 -246 327 338 23 15 chr10 6477077 6477210 -139112078 + MIR SINE MIR 21 154 -108 306 197 26 0 chr10 6477321 6477438 -139111850 + (TA)n Simple_repeat Simple_repeat 2 121 0 239 231 0 10 chr10 6477485 6477589 -139111699 + (TA)n Simple_repeat Simple_repeat 1 103 0 305 309 79 10 chr10 6478529 6478811 -139110477 - L2 LINE L2 -266 3047 2696 3212 152 9 12 chr10 6478821 6479379 -139109909 + L1MB3 LINE L1 5587 6142 -41 1950 130 3 63 chr10 6479379 6479694 -139109594 + AluSx SINE Alu 1 296 -16 227 189 0 0 chr10 6479694 6479747 -139109541 + (TCTA)n Simple_repeat Simple_repeat 4 56 0 305 96 19 0 chr10 6479747 6479799 -139109489 + L1MB3 LINE L1 6131 6183 0 446 173 6 0 chr10 6480503 6480583 -139108705 + L1MA7 LINE L1 5857 5940 -240 1447 96 10 38 chr10 6480584 6480793 -139108495 - AluSg/x SINE Alu -11 301 99 1540 183 39 39 chr10 6480794 6481149 -139108139 + L1MA7 LINE L1 5935 6289 -2 2187 111 17 0 chr10 6481830 6482128 -139107160 + AluSx SINE Alu 3 305 -7 341 356 8 0 chr10 6482722 6482840 -139106448 + (TG)n Simple_repeat Simple_repeat 2 120 0 660 240 121 96 chr10 6483789 6484268 -139105020 + MLT1J LTR MaLR 1 491 -20 1256 103 0 11 chr10 6484776 6485069 -139104219 + (TCCA)n Simple_repeat Simple_repeat 1 469 0 407 266 87 39 chr10 6485102 6485309 -139103979 - MIR SINE MIR -44 218 2 1700 178 16 7 chr10 6486346 6486655 -139102633 - AluJo SINE Alu 0 312 1 254 237 101 35 chr10 6488410 6488579 -139100709 + Charlie7 DNA MER1_type 2390 2569 -43 2284 91 0 0 chr10 6488599 6488886 -139100402 - AluSx SINE Alu -12 300 14 180 97 0 0 chr10 6488905 6488936 -139100352 + (A)n Simple_repeat Simple_repeat 1 31 0 1477 204 36 68 chr10 6490142 6490616 -139098672 + L1MC5 LINE L1 6726 7183 -787 348 266 65 72 chr10 6490810 6491088 -139098200 - L2 LINE L2 -190 3082 2807 312 227 0 0 chr10 6491447 6491522 -139097766 + MER53 DNA DNA 1 75 -114 341 237 68 59 chr10 6491683 6491696 -139097592 - L2 LINE L2 -13 3300 3289 495 0 0 0 chr10 6491696 6491751 -139097537 + (TCCA)n Simple_repeat Simple_repeat 2 56 0 341 237 68 59 chr10 6491751 6491855 -139097433 - L2 LINE L2 -24 3289 3182 592 228 153 36 chr10 6491908 6492242 -139097046 + L1ME4a LINE L1 5745 6117 -4 200 333 0 0 chr10 6492324 6492387 -139096901 + MIR SINE MIR 68 130 -78 267 31 0 0 chr10 6492593 6492625 -139096663 + (TG)n Simple_repeat Simple_repeat 2 33 0 210 250 120 28 chr10 6494518 6494626 -139094662 + MIR SINE MIR 83 200 -62 437 234 80 106 chr10 6495666 6496016 -139093272 - L1MEd LINE L1 -4869 1250 910 2889 144 214 113 chr10 6496033 6496207 -139093081 - L1 LINE L1 -1833 5273 5118 7581 26 0 4 chr10 6496207 6497224 -139092064 - L1PA3 LINE L1 0 6155 5132 2889 144 214 113 chr10 6497224 6498078 -139091210 - L1 LINE L1 -1988 5118 4141 3890 210 70 51 chr10 6498079 6498745 -139090543 - L1 LINE L1 -3024 4082 3431 471 78 0 0 chr10 6498745 6498809 -139090479 + (TA)n Simple_repeat Simple_repeat 1 64 0 3890 210 70 51 chr10 6498809 6501257 -139088031 - L1 LINE L1 -3675 3431 7 182 373 25 8 chr10 6502999 6503117 -139086171 + L2 LINE L2 2907 3026 -246 557 120 9 56 chr10 6503516 6503578 -139085710 + L1MB3 LINE L1 6081 6137 -46 1540 223 13 21 chr10 6503578 6503955 -139085333 - MLT1A2 LTR MaLR 0 374 1 557 120 9 56 chr10 6503955 6504000 -139085288 + L1MB3 LINE L1 6137 6183 0 246 216 0 0 chr10 6504027 6504078 -139085210 + L1MC4 LINE L1 6652 6702 -1340 231 114 0 0 chr10 6504085 6504120 -139085168 + (TA)n Simple_repeat Simple_repeat 1 35 0 844 213 100 108 chr10 6504909 6505416 -139083872 - MER34C LTR ERV1 -1 584 80 3057 120 5 0 chr10 6505416 6505848 -139083440 + MER57B LTR ERV1 1 434 0 844 213 100 108 chr10 6505848 6505889 -139083399 - MER34C LTR ERV1 -505 80 40 2474 134 31 24 chr10 6506235 6506660 -139082628 - MSTA LTR MaLR 0 428 1 186 376 77 0 chr10 6507140 6507257 -139082031 - MIR3 SINE MIR -29 179 54 3305 157 35 2 chr10 6507662 6508198 -139081090 + MER41C LTR ERV1 1 554 0 224 302 0 0 chr10 6508335 6508388 -139080900 - MIR SINE MIR -135 73 21 44098 29 21 1 chr10 6508931 6514963 -139074325 - L1HS LINE L1 0 6155 1 901 267 185 18 chr10 6515022 6515494 -139073794 - MLT1G1 LTR MaLR 0 595 1 450 219 203 0 chr10 6515550 6515673 -139073615 - MER5A DNA MER1_type -1 188 41 379 191 0 0 chr10 6515963 6516031 -139073257 + MER57B LTR ERV1 38 105 -329 198 356 45 15 chr10 6516152 6516284 -139073004 - L2 LINE L2 -9 3304 3169 1633 171 29 0 chr10 6516393 6516696 -139072592 - AluJo SINE Alu 0 311 1 1779 193 34 3 chr10 6516701 6517089 -139072199 - L1MA4 LINE L1 0 6300 5901 1773 164 52 27 chr10 6517492 6517857 -139071431 - THE1C LTR MaLR -1 374 1 37 0 0 0 chr10 6517939 6517976 -139071312 + AT_rich Low_complexity Low_complexity 1 37 0 745 222 0 0 chr10 6518252 6518387 -139070901 + MER63A DNA MER1_type 51 185 -25 577 207 117 0 chr10 6518391 6518502 -139070786 + AluJb SINE Alu 137 260 -52 234 330 37 28 chr10 6518584 6518693 -139070595 + L2 LINE L2 3151 3260 -12 2241 110 78 26 chr10 6518734 6519080 -139070208 - THE1B LTR MaLR 0 364 1 11980 86 14 3 chr10 6519080 6520642 -139068646 - THE1B-int LTR MaLR 0 1580 1 2267 97 69 26 chr10 6520642 6520991 -139068297 - THE1B LTR MaLR 0 364 1 1608 175 33 0 chr10 6522929 6523230 -139066058 + AluJo SINE Alu 1 310 0 216 0 0 0 chr10 6523573 6523597 -139065691 + (T)n Simple_repeat Simple_repeat 1 24 0 201 196 0 0 chr10 6526145 6526191 -139063097 + (CA)n Simple_repeat Simple_repeat 1 46 0 576 223 0 0 chr10 6526202 6526377 -139062911 + (CA)n Simple_repeat Simple_repeat 2 176 0 264 176 0 0 chr10 6526407 6526458 -139062830 - MER4-int LTR ERV1 -5436 1162 1112 546 199 0 32 chr10 6526476 6526662 -139062626 + (CA)n Simple_repeat Simple_repeat 1 180 0 2289 110 13 0 chr10 6526770 6527078 -139062210 + AluSx SINE Alu 1 312 0 395 293 93 37 chr10 6527204 6527557 -139061731 - HAL1 LINE L1 -4 2503 2095 1454 251 73 19 chr10 6527557 6528024 -139061264 - MLT1F1 LTR MaLR 0 567 76 2192 215 78 23 chr10 6528035 6528597 -139060691 - MLT1E LTR MaLR 0 593 1 330 234 138 0 chr10 6528610 6528704 -139060584 - L1MC4a LINE L1 0 7808 7731 * 4016 270 113 34 chr10 6528702 6529928 -139059360 - HAL1 LINE L1 -419 2088 652 5065 104 9 11 chr10 6529928 6530621 -139058667 + LTR8 LTR ERV1 1 691 0 4016 270 113 34 chr10 6530621 6531328 -139057960 - HAL1 LINE L1 -1855 652 2 3970 118 37 5 chr10 6531650 6532243 -139057045 - LTR9 LTR ERV1 0 612 1 879 223 72 5 chr10 6532511 6532704 -139056584 - MER58A DNA MER1_type -18 206 1 2198 94 0 16 chr10 6532863 6533170 -139056118 - AluSg SINE Alu -8 302 1 1363 129 0 53 chr10 6534231 6534352 -139054936 - LTR8 LTR ERV1 0 691 584 2567 49 0 7 chr10 6534352 6534659 -139054629 - AluY SINE Alu -6 305 1 1363 129 0 53 chr10 6534659 6534746 -139054542 - LTR8 LTR ERV1 -107 584 494 2623 87 45 6 chr10 6534754 6535111 -139054177 - LTR8 LTR ERV1 -320 371 1 4241 193 19 30 chr10 6535548 6536406 -139052882 - L1MB7 LINE L1 0 6184 5318 1947 124 32 0 chr10 6536406 6536689 -139052599 - AluSx SINE Alu -20 292 1 4241 193 19 30 chr10 6536689 6536938 -139052350 - L1MB7 LINE L1 -866 5318 5068 2221 118 3 3 chr10 6536938 6537242 -139052046 + AluSq SINE Alu 1 304 -9 4241 193 19 30 chr10 6537242 6537634 -139051654 - L1MB7 LINE L1 -1116 5068 4698 235 355 74 8 chr10 6537888 6538009 -139051279 - L2 LINE L2 -1 3271 3143 1790 140 20 43 chr10 6538038 6538338 -139050950 - AluJb SINE Alu -1 311 19 225 175 0 0 chr10 6538510 6538550 -139050738 + L2 LINE L2 3258 3297 -16 225 291 64 0 chr10 6539367 6539477 -139049811 + MIR SINE MIR 16 132 -130 291 309 50 55 chr10 6539496 6539697 -139049591 + L2 LINE L2 3107 3306 -7 233 333 11 0 chr10 6539684 6539777 -139049511 + MIR SINE MIR 130 223 -39 * 316 233 14 0 chr10 6539853 6539926 -139049362 - MER94 DNA DNA -13 121 48 620 212 8 15 chr10 6540039 6540171 -139049117 + FLAM_A SINE Alu 12 142 0 2028 169 92 43 chr10 6540253 6540698 -139048590 + LTR24 LTR ERV1 1 467 0 2200 66 38 0 chr10 6541354 6541641 -139047647 + L1PA7 LINE L1 5853 6150 -4 198 0 0 0 chr10 6541667 6541689 -139047599 + (A)n Simple_repeat Simple_repeat 1 22 0 1776 143 89 4 chr10 6541949 6542229 -139047059 + AluSg SINE Alu 1 304 -6 223 179 0 71 chr10 6543073 6543129 -139046159 + L2 LINE L2 3262 3313 0 464 86 14 0 chr10 6543513 6543583 -139045705 + (GA)n Simple_repeat Simple_repeat 2 72 0 753 125 24 18 chr10 6543663 6543831 -139045457 + CT-rich Low_complexity Low_complexity 3 171 0 909 148 0 16 chr10 6543834 6544017 -139045271 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 802 202 11 7 chr10 6544008 6544270 -139045018 + CT-rich Low_complexity Low_complexity 1 262 0 * 1885 167 13 3 chr10 6544278 6544578 -139044710 - AluSx SINE Alu -9 303 1 386 151 48 8 chr10 6546766 6546892 -139042396 + (TG)n Simple_repeat Simple_repeat 1 131 0 265 240 48 19 chr10 6546909 6547013 -139042275 + (TG)n Simple_repeat Simple_repeat 2 108 0 1603 204 54 104 chr10 6547022 6547655 -139041633 - L1MC5 LINE L1 -72 7889 7289 2188 109 10 0 chr10 6547656 6547950 -139041338 - AluSq SINE Alu -16 297 1 498 290 105 29 chr10 6548067 6548381 -139040907 - L1ME LINE L1 -397 5773 5436 2285 122 0 0 chr10 6548586 6548890 -139040398 - AluSx SINE Alu -8 304 1 298 250 43 122 chr10 6549847 6549996 -139039292 + MER20B DNA MER1_type 43 176 -43 2271 101 20 0 chr10 6549996 6550293 -139038995 + AluSx SINE Alu 1 303 -9 298 250 43 122 chr10 6550293 6550331 -139038957 + MER20B DNA MER1_type 176 215 -4 559 288 7 0 chr10 6550485 6550638 -139038650 + MIR SINE MIR 109 262 0 787 181 100 0 chr10 6550882 6551042 -139038246 + MER58A DNA MER1_type 46 221 -3 659 218 84 14 chr10 6551362 6551504 -139037784 - FRAM SINE Alu -13 153 2 420 311 73 39 chr10 6551625 6552033 -139037255 + L1M4 LINE L1 4562 4983 -1163 2487 75 0 0 chr10 6552240 6552547 -139036741 - AluY SINE Alu -4 307 1 297 0 0 0 chr10 6552770 6552803 -139036485 + (CA)n Simple_repeat Simple_repeat 1 33 0 189 0 0 0 chr10 6552833 6552854 -139036434 + (CA)n Simple_repeat Simple_repeat 1 21 0 940 269 78 14 chr10 6553180 6553526 -139035762 + L1MEc LINE L1 39 406 -5990 1686 260 38 66 chr10 6553529 6554267 -139035021 + L1MEc LINE L1 613 1325 -5071 2109 134 0 0 chr10 6554267 6554558 -139034730 - AluSx SINE Alu -21 291 1 1686 260 38 66 chr10 6554558 6554687 -139034601 + L1MEc LINE L1 1325 1456 -4940 474 18 0 0 chr10 6554697 6554752 -139034536 + (TA)n Simple_repeat Simple_repeat 1 55 0 2182 113 0 10 chr10 6555042 6555342 -139033946 - AluSx SINE Alu -15 297 1 5219 90 3 4 chr10 6555513 6556223 -139033065 - L1PB2 LINE L1 -1 6150 5442 776 147 41 14 chr10 6558066 6558506 -139030782 + (TCTA)n Simple_repeat Simple_repeat 1 452 0 205 310 17 0 chr10 6558533 6558591 -139030697 + (TG)n Simple_repeat Simple_repeat 2 60 0 2068 239 95 86 chr10 6558618 6558981 -139030307 - HAL1 LINE L1 -131 2376 2018 2173 135 0 0 chr10 6558981 6559284 -139030004 - AluSx SINE Alu -9 303 1 2024 81 0 4 chr10 6559293 6559540 -139029748 - AluSg SINE Alu -22 288 43 2068 239 95 86 chr10 6559540 6560411 -139028877 - HAL1 LINE L1 -496 2011 1121 1782 181 3 0 chr10 6560500 6560792 -139028496 + AluJo SINE Alu 3 295 -17 635 211 24 0 chr10 6560792 6560915 -139028373 - MER3 DNA MER1_type -80 129 4 273 352 24 8 chr10 6561465 6561590 -139027698 - MIR SINE MIR 0 262 136 380 268 31 24 chr10 6561617 6561744 -139027544 - MIR SINE MIR -62 146 19 465 333 75 9 chr10 6561750 6561963 -139027325 + MIR SINE MIR 11 237 -25 2420 78 7 3 chr10 6564521 6564817 -139024471 - AluSg SINE Alu -13 297 1 734 144 0 24 chr10 6564988 6565113 -139024175 + FLAM_C SINE Alu 21 142 -1 260 296 167 0 chr10 6565539 6565647 -139023641 - MIR3 SINE MIR -30 178 53 25 31 0 0 chr10 6565988 6566020 -139023268 + AT_rich Low_complexity Low_complexity 1 32 0 1619 78 0 0 chr10 6566138 6566331 -139022957 - AluSq SINE Alu -120 193 1 202 274 0 16 chr10 6568025 6568087 -139021201 + GA-rich Low_complexity Low_complexity 4 64 0 1071 174 76 27 chr10 6569014 6569238 -139020050 - AluJb SINE Alu 0 312 78 1642 113 0 0 chr10 6569238 6569450 -139019838 - AluSq SINE Alu -101 212 1 271 231 141 25 chr10 6570458 6570579 -139018709 + MIR SINE MIR 51 185 -77 529 317 0 11 chr10 6570591 6570771 -139018517 + (CA)n Simple_repeat Simple_repeat 2 179 0 225 243 0 0 chr10 6570800 6570870 -139018418 + (CA)n Simple_repeat Simple_repeat 1 70 0 335 248 128 18 chr10 6571898 6572007 -139017281 + MIR3 SINE MIR 73 193 -15 294 323 79 0 chr10 6572640 6572767 -139016521 + L2 LINE L2 3136 3272 0 236 278 33 0 chr10 6572905 6572995 -139016293 + L1PB4 LINE L1 6064 6156 0 2334 100 10 10 chr10 6573044 6573355 -139015933 + AluSx SINE Alu 1 311 -1 32 0 0 0 chr10 6573665 6573697 -139015591 + AT_rich Low_complexity Low_complexity 1 32 0 1666 57 0 0 chr10 6574211 6574404 -139014884 - AluY SINE Alu -13 298 106 1320 105 96 0 chr10 6574900 6575109 -139014179 + MER30 DNA MER1_type 1 229 -1 1764 160 3 7 chr10 6575136 6575423 -139013865 + AluJb SINE Alu 11 296 -16 453 264 16 8 chr10 6575596 6575717 -139013571 - L1MD2 LINE L1 -17 6342 6221 1431 212 67 6 chr10 6575734 6576064 -139013224 - L1MD2 LINE L1 -215 6144 5795 1471 217 47 25 chr10 6576455 6576814 -139012474 + MLT1A2 LTR MaLR 1 367 -7 2471 75 0 7 chr10 6576942 6577248 -139012040 - AluY SINE Alu -7 304 1 1775 170 0 27 chr10 6577893 6578193 -139011095 - AluJo SINE Alu -20 292 1 363 203 14 0 chr10 6578716 6578785 -139010503 - MER8 DNA MER2_type 0 239 170 * 2536 139 59 5 chr10 6578774 6579197 -139010091 + Tigger2 DNA MER2_type 2273 2718 0 2091 100 94 26 chr10 6579204 6579555 -139009733 + THE1C LTR MaLR 1 375 0 2101 116 14 3 chr10 6580002 6580294 -139008994 + AluSx SINE Alu 1 295 -17 1488 108 5 0 chr10 6580543 6580737 -139008551 - AluSp SINE Alu -118 195 1 492 191 35 43 chr10 6580752 6580867 -139008421 - FLAM_A SINE Alu -1 141 28 2286 111 0 0 chr10 6581975 6582272 -139007016 + AluSq SINE Alu 1 297 -16 1817 164 43 27 chr10 6582606 6582977 -139006311 + L1MA8 LINE L1 5639 6015 -276 943 175 18 0 chr10 6582975 6583146 -139006142 + L1MB2 LINE L1 5768 5941 -230 * 332 122 0 0 chr10 6583155 6583204 -139006084 + MADE1 DNA Mariner 26 74 -6 1306 134 29 34 chr10 6583204 6583358 -139005930 + L1MB2 LINE L1 5932 6086 -85 2083 113 48 0 chr10 6583358 6583651 -139005637 - AluSx SINE Alu -4 308 2 1306 134 29 34 chr10 6583651 6583735 -139005553 + L1MB2 LINE L1 6086 6169 -2 219 146 0 0 chr10 6583987 6584028 -139005260 + (CA)n Simple_repeat Simple_repeat 2 42 0 2302 71 7 0 chr10 6584165 6584445 -139004843 + AluSx SINE Alu 29 310 -2 181 356 54 13 chr10 6585396 6585545 -139003743 - MIR SINE MIR -44 218 64 2439 91 0 3 chr10 6585653 6585961 -139003327 - AluSx SINE Alu -5 307 1 2456 74 0 3 chr10 6586422 6586719 -139002569 + AluSc SINE Alu 1 296 -13 2168 110 3 3 chr10 6587711 6588002 -139001286 - AluSc SINE Alu -18 291 1 38262 31 4 0 chr10 6588081 6593380 -138995908 + L1PA3 LINE L1 840 6155 0 242 327 135 18 chr10 6593819 6594146 -138995142 - L2 LINE L2 -817 2497 2133 683 221 25 25 chr10 6595022 6595185 -138994103 + L1MD2 LINE L1 6195 6357 -2 263 221 91 0 chr10 6595486 6595563 -138993725 - MIR SINE MIR -70 192 109 209 267 244 36 chr10 6596602 6596827 -138992461 - L3 LINE CR1 -149 1428 1157 274 266 0 0 chr10 6596827 6596891 -138992397 + L1MD2 LINE L1 6218 6281 -78 481 333 24 51 chr10 6596891 6597224 -138992064 - L3 LINE CR1 -427 1150 827 1427 203 49 7 chr10 6597243 6597529 -138991759 - AluJo SINE Alu -14 298 1 803 199 197 102 chr10 6598751 6599172 -138990116 + MLT1C LTR MaLR 4 464 -3 1990 138 3 22 chr10 6599776 6600087 -138989201 - AluSx SINE Alu -7 305 1 798 130 23 23 chr10 6600121 6600601 -138988687 + (TCCA)n Simple_repeat Simple_repeat 1 480 0 2092 134 0 0 chr10 6602018 6602316 -138986972 + AluSx SINE Alu 1 298 -14 289 312 98 17 chr10 6602495 6602668 -138986620 + L3b LINE CR1 1287 1473 -110 2125 126 7 0 chr10 6603741 6604043 -138985245 - AluSx SINE Alu -8 304 1 396 232 145 7 chr10 6606200 6606338 -138982950 + MIR SINE MIR 47 203 -59 1010 87 0 6 chr10 6606592 6606753 -138982535 + (GA)n Simple_repeat Simple_repeat 1 160 0 277 219 68 14 chr10 6606983 6607056 -138982232 + MIR SINE MIR 68 144 -64 700 192 8 0 chr10 6607224 6607344 -138981944 + FLAM_A SINE Alu 4 124 -9 243 270 0 0 chr10 6608249 6608312 -138980976 + MIR SINE MIR 180 242 -20 532 296 44 52 chr10 6608395 6608645 -138980643 - MER115 DNA AcHobo -1 692 445 262 286 169 0 chr10 6608642 6608719 -138980569 - MER115 DNA AcHobo -426 267 178 * 311 275 11 0 chr10 6608980 6609071 -138980217 + MIR3 SINE MIR 109 200 -8 574 164 27 0 chr10 6609124 6609234 -138980054 + L1MC1 LINE L1 5792 5904 -429 1930 114 88 0 chr10 6609964 6610237 -138979051 + AluSx SINE Alu 1 297 -15 2223 108 3 32 chr10 6610756 6611096 -138978192 + AluSx SINE Alu 1 312 0 2503 76 0 0 chr10 6611322 6611626 -138977662 + AluY SINE Alu 1 304 -7 1512 228 198 92 chr10 6611800 6612002 -138977286 + LTR24B LTR ERV1 1 180 -455 2179 114 7 3 chr10 6612002 6612308 -138976980 - AluSq SINE Alu -6 307 1 1512 228 198 92 chr10 6612308 6612680 -138976608 + LTR24B LTR ERV1 180 635 0 1061 24 87 0 chr10 6615333 6615460 -138973828 - MER85 DNA T2_type -1 138 1 336 303 30 0 chr10 6615883 6616015 -138973273 - L1ME LINE L1 -297 5824 5689 252 323 152 0 chr10 6616541 6616640 -138972648 + L2 LINE L2 3144 3257 -15 2449 89 0 0 chr10 6616881 6617210 -138972078 + AluSx SINE Alu 1 312 0 298 242 156 8 chr10 6617561 6617689 -138971599 + L1ME4a LINE L1 5975 6121 0 2075 102 3 71 chr10 6618943 6619265 -138970023 + AluSx SINE Alu 1 300 -12 256 316 88 20 chr10 6619792 6619963 -138969325 + MIR SINE MIR 23 202 -60 243 239 14 28 chr10 6621267 6621338 -138967950 + CT-rich Low_complexity Low_complexity 2 71 0 961 167 80 0 chr10 6621448 6621610 -138967678 + MLT1B LTR MaLR 3 177 -213 591 218 24 0 chr10 6621613 6621737 -138967551 + FLAM_A SINE Alu 1 127 -15 971 208 9 28 chr10 6621742 6621936 -138967352 + MLT1B LTR MaLR 179 370 -20 2470 120 25 6 chr10 6621936 6622293 -138966995 - THE1B LTR MaLR 0 364 1 971 208 9 28 chr10 6622293 6622314 -138966974 + MLT1B LTR MaLR 370 390 0 1747 170 3 7 chr10 6623427 6623727 -138965561 + AluSx SINE Alu 1 299 -13 1941 129 181 38 chr10 6625614 6626039 -138963249 + MER66B LTR ERV1 1 486 0 2387 90 0 23 chr10 6627011 6627321 -138961967 + AluSx SINE Alu 1 303 -9 218 195 0 0 chr10 6627481 6627522 -138961766 + L2 LINE L2 3213 3253 -19 2326 95 7 0 chr10 6627683 6627979 -138961309 - AluSx SINE Alu -14 298 1 1966 125 7 10 chr10 6628088 6628376 -138960912 - AluJo SINE Alu -25 287 1 203 333 0 0 chr10 6628825 6628888 -138960400 + GA-rich Low_complexity Low_complexity 4 66 0 * 214 328 11 33 chr10 6628842 6629025 -138960263 + G-rich Low_complexity Low_complexity 2 180 0 1648 155 15 92 chr10 6629741 6630076 -138959212 + AluJo SINE Alu 3 311 -1 510 202 64 35 chr10 6631706 6631879 -138957409 - MIR SINE MIR -57 205 28 1210 184 44 41 chr10 6632446 6632766 -138956522 + MER33 DNA MER1_type 4 324 0 257 321 27 27 chr10 6633010 6633122 -138956166 + MIR3 SINE MIR 13 124 -84 519 296 145 37 chr10 6633958 6634529 -138954759 + L2 LINE L2 2070 2702 -612 250 311 110 6 chr10 6634646 6634810 -138954478 + L2 LINE L2 2878 3058 -255 847 187 30 0 chr10 6635063 6635229 -138954059 + L1PB4 LINE L1 5959 6129 -27 2267 127 0 3 chr10 6635229 6635537 -138953751 + AluSx SINE Alu 1 307 -5 26 0 0 0 chr10 6635574 6635600 -138953688 + AT_rich Low_complexity Low_complexity 1 26 0 1252 140 0 0 chr10 6635961 6636140 -138953148 - AluSg/x SINE Alu -3 309 131 24 32 0 0 chr10 6639562 6639593 -138949695 + AT_rich Low_complexity Low_complexity 1 31 0 275 185 17 17 chr10 6639662 6639781 -138949507 + (TA)n Simple_repeat Simple_repeat 2 120 0 2233 110 3 10 chr10 6640835 6641145 -138948143 + AluSp SINE Alu 1 308 -5 24 24 0 24 chr10 6643066 6643086 -138946202 + AT_rich Low_complexity Low_complexity 1 20 -21 1804 164 3 3 chr10 6643086 6643372 -138945916 - AluJo SINE Alu -26 286 1 24 24 0 24 chr10 6643372 6643393 -138945895 + AT_rich Low_complexity Low_complexity 20 41 0 2434 77 3 0 chr10 6644187 6644487 -138944801 - AluY SINE Alu -10 301 1 312 172 0 0 chr10 6644693 6644751 -138944537 + CT-rich Low_complexity Low_complexity 3 60 0 655 148 28 23 chr10 6644767 6644943 -138944345 + CT-rich Low_complexity Low_complexity 3 179 0 1666 181 0 0 chr10 6644968 6645239 -138944049 - AluJb SINE Alu -39 273 3 649 189 30 40 chr10 6645522 6645723 -138943565 - L1MC5 LINE L1 -37 7924 7726 354 59 0 20 chr10 6645730 6645781 -138943507 + U5 snRNA snRNA 6 55 -61 407 204 12 70 chr10 6645781 6645953 -138943335 - L1MC5 LINE L1 -234 7727 7566 245 320 100 27 chr10 6647679 6647829 -138941459 + MIR SINE MIR 31 191 -71 1924 82 0 0 chr10 6648773 6649004 -138940284 - AluSq SINE Alu -82 231 1 389 268 77 22 chr10 6649783 6649966 -138939322 + Charlie2a DNA MER1_type 1694 1886 -976 2370 182 38 5 chr10 6650754 6651200 -138938088 - LOR1b LTR ERV1 0 461 1 180 0 0 0 chr10 6652743 6652763 -138936525 + (A)n Simple_repeat Simple_repeat 1 20 0 265 234 177 42 chr10 6653132 6653324 -138935964 + L2 LINE L2 3000 3217 -96 180 276 112 43 chr10 6654118 6654234 -138935054 + MIR3 SINE MIR 51 174 -34 306 0 0 0 chr10 6656884 6656918 -138932370 + (T)n Simple_repeat Simple_repeat 1 34 0 501 230 146 34 chr10 6657265 6657504 -138931784 + L1ME1 LINE L1 5901 6166 0 31 0 0 0 chr10 6657804 6657835 -138931453 + AT_rich Low_complexity Low_complexity 1 31 0 1818 131 18 4 chr10 6657837 6658140 -138931148 + AluSx SINE Alu 3 309 0 230 337 0 0 chr10 6658193 6658276 -138931012 + L1ME LINE L1 5476 5558 -563 210 191 0 0 chr10 6658295 6658342 -138930946 + (TATG)n Simple_repeat Simple_repeat 4 50 0 3686 181 9 13 chr10 6658623 6659297 -138929991 + LTR51 LTR ERV1 1 671 0 226 331 106 7 chr10 6659413 6659555 -138929733 + L2 LINE L2 2255 2410 -904 220 323 24 24 chr10 6659782 6659949 -138929339 + L2 LINE L2 2892 3058 -214 597 252 38 0 chr10 6660727 6660886 -138928402 + MIR SINE MIR 98 262 0 309 26 0 0 chr10 6661184 6661222 -138928066 + (TTATG)n Simple_repeat Simple_repeat 2 39 0 2271 85 4 0 chr10 6661221 6661537 -138927751 - AluSx SINE Alu 0 317 1 1656 154 45 45 chr10 6662463 6662749 -138926539 + AluJo SINE Alu 1 286 -26 23 68 0 0 chr10 6662754 6662798 -138926490 + AT_rich Low_complexity Low_complexity 1 44 0 241 265 56 104 chr10 6663533 6663734 -138925554 - MIR SINE MIR -42 220 30 290 115 0 19 chr10 6664529 6664581 -138924707 - MADE1 DNA Mariner 0 80 30 975 125 0 0 chr10 6664591 6664719 -138924569 + AluSq/x SINE Alu 1 128 -184 415 39 0 0 chr10 6664732 6664784 -138924504 - MADE1 DNA Mariner -28 52 1 322 250 48 0 chr10 6665333 6665417 -138923871 + MIR SINE MIR 175 262 0 192 77 0 0 chr10 6665564 6665590 -138923698 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 297 277 162 41 chr10 6665608 6666454 -138922834 - L2 LINE L2 -40 3273 2329 1610 238 65 99 chr10 6666854 6667573 -138921715 + LTR34 LTR ERV1 1 695 -4 434 219 10 146 chr10 6668974 6669166 -138920122 + MIR SINE MIR 61 226 -36 479 241 84 12 chr10 6670353 6670519 -138918769 + MER5A DNA MER1_type 6 183 -6 944 164 77 24 chr10 6670610 6670818 -138918470 + MER20 DNA MER1_type 1 219 0 419 310 29 17 chr10 6671126 6671300 -138917988 - MIR3 SINE MIR -23 185 10 183 121 61 0 chr10 6672141 6672174 -138917114 + MER5C DNA MER1_type 289 323 -1 1413 125 128 76 chr10 6672298 6672504 -138916784 - L1MC1 LINE L1 0 6333 6102 2246 104 3 0 chr10 6672504 6672792 -138916496 - AluSx SINE Alu -23 289 1 1413 125 128 76 chr10 6672792 6672913 -138916375 - L1MC1 LINE L1 -231 6102 5989 340 360 91 28 chr10 6672932 6673296 -138915992 + L1MB3 LINE L1 4745 5131 -1015 22 0 0 0 chr10 6673376 6673398 -138915890 + AT_rich Low_complexity Low_complexity 1 22 0 242 205 36 36 chr10 6673403 6673486 -138915802 + L1MB3 LINE L1 5296 5378 -786 471 266 86 9 chr10 6673529 6673802 -138915486 + MER46C DNA MER2_type 1 327 -11 361 310 13 7 chr10 6673846 6674001 -138915287 + L1MB3 LINE L1 5657 5812 -309 339 44 0 0 chr10 6674063 6674108 -138915180 + (TA)n Simple_repeat Simple_repeat 2 46 0 246 312 50 28 chr10 6674259 6674400 -138914888 - MIR SINE MIR -50 212 69 359 179 51 13 chr10 6674799 6674877 -138914411 + MER65B LTR ERV1 1 81 -450 317 258 31 0 chr10 6676695 6676792 -138912496 - MIR SINE MIR -62 146 47 195 42 0 0 chr10 6678077 6678101 -138911187 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1629 105 113 4 chr10 6678104 6678343 -138910945 - AluSx SINE Alu -31 281 17 2834 120 19 1 chr10 6678574 6679048 -138910240 + MER1A DNA MER1_type 1 529 0 542 299 54 50 chr10 6679165 6679463 -138909825 - L3 LINE CR1 -178 1399 1101 4027 191 24 3 chr10 6679508 6680290 -138908998 - L1MB3 LINE L1 -3 6180 5382 421 342 134 23 chr10 6680292 6680768 -138908520 - L3 LINE CR1 -461 1116 588 219 388 109 0 chr10 6680829 6680994 -138908294 - L3 LINE CR1 -1099 478 296 * 228 317 100 22 chr10 6680990 6681220 -138908068 - L3b LINE CR1 -205 1378 1131 234 306 0 0 chr10 6681450 6681512 -138907776 + MIR SINE MIR 86 147 -61 249 33 0 0 chr10 6682671 6682701 -138906587 + (CAAAAA)n Simple_repeat Simple_repeat 3 32 0 2157 110 10 3 chr10 6683922 6684213 -138905075 - AluSg SINE Alu -15 295 3 393 254 49 78 chr10 6684566 6684685 -138904603 - MIR SINE MIR -32 230 118 1772 199 8 18 chr10 6684685 6685026 -138904262 + L1MB3 LINE L1 5795 6133 -50 2136 109 27 3 chr10 6685026 6685320 -138903968 + AluSg SINE Alu 1 301 -9 1772 199 8 18 chr10 6685320 6685370 -138903918 + L1MB3 LINE L1 6133 6182 -1 393 254 49 78 chr10 6685370 6685455 -138903833 - MIR SINE MIR -144 118 32 5976 25 6 0 chr10 6685762 6686452 -138902836 - L1PA3 LINE L1 -1725 4421 3728 8506 21 1 0 chr10 6686452 6688188 -138901100 + L1PA3 LINE L1 4415 6152 -3 471 81 0 0 chr10 6688811 6688873 -138900415 - MADE1 DNA Mariner -1 79 18 3725 172 29 38 chr10 6688879 6688920 -138900368 - L1MB2 LINE L1 -1 6170 6130 2239 98 0 19 chr10 6688920 6689227 -138900061 - AluSx SINE Alu -11 301 1 3725 172 29 38 chr10 6689227 6689577 -138899711 - L1MB2 LINE L1 -41 6130 5778 2021 154 0 0 chr10 6689577 6689869 -138899419 - AluSx SINE Alu -20 292 1 3725 172 29 38 chr10 6689869 6690249 -138899039 - L1MB2 LINE L1 -393 5778 5405 5725 127 4 8 chr10 6690290 6690678 -138898610 - L1PA13 LINE L1 -1 6162 5774 2517 70 3 13 chr10 6690678 6690991 -138898297 - AluY SINE Alu -1 310 1 5725 127 4 8 chr10 6690991 6691500 -138897788 - L1PA13 LINE L1 -389 5774 5263 1772 180 7 10 chr10 6691756 6692062 -138897226 - AluJb SINE Alu -7 305 1 1689 199 119 11 chr10 6692062 6692524 -138896764 - Charlie1b DNA MER1_type -11 512 1 1776 144 0 0 chr10 6692550 6692813 -138896475 + AluJb SINE Alu 48 310 -2 252 284 22 0 chr10 6692857 6692934 -138896354 + CT-rich Low_complexity Low_complexity 3 137 0 303 336 14 14 chr10 6692942 6693085 -138896203 - L1ME LINE L1 -461 5709 5567 386 129 16 0 chr10 6693370 6693432 -138895856 + MIR SINE MIR 81 143 -65 3160 134 87 0 chr10 6694039 6694567 -138894721 + L1PA16 LINE L1 5592 6165 -1 1925 153 3 7 chr10 6695027 6695335 -138893953 + AluSx SINE Alu 5 311 -1 1872 166 0 7 chr10 6695456 6695751 -138893537 + AluJo SINE Alu 14 306 -6 1128 145 128 4 chr10 6695755 6695990 -138893298 + L1MB4 LINE L1 5917 6180 0 202 331 75 23 chr10 6696059 6696192 -138893096 + L2 LINE L2 1278 1417 -1897 2186 110 14 0 chr10 6698663 6698954 -138890334 - AluSx SINE Alu -17 295 1 584 147 10 0 chr10 6699131 6699233 -138890055 - L1MA4A LINE L1 -2 6301 6199 223 290 27 98 chr10 6699235 6699418 -138889870 + L2 LINE L2 3143 3312 -1 2345 98 0 0 chr10 6700053 6700349 -138888939 + AluY SINE Alu 1 296 -15 1806 168 10 7 chr10 6700398 6700695 -138888593 + AluJb SINE Alu 15 312 0 661 268 172 0 chr10 6701990 6702199 -138887089 + MIR SINE MIR 18 262 0 369 232 24 32 chr10 6703026 6703151 -138886137 - L2 LINE L2 -7 3265 3142 517 176 18 115 chr10 6703912 6704077 -138885211 + MLT1F LTR MaLR 388 536 -6 1609 139 78 20 chr10 6707246 6707541 -138881747 + AluSx SINE Alu 1 312 0 21 57 0 0 chr10 6707739 6707774 -138881514 + AT_rich Low_complexity Low_complexity 1 35 0 2347 88 0 3 chr10 6707796 6708093 -138881195 - AluY SINE Alu -15 296 1 349 288 45 45 chr10 6708421 6708553 -138880735 - L2 LINE L2 0 3313 3182 2327 112 0 0 chr10 6709846 6710150 -138879138 - AluSx SINE Alu -8 304 1 1812 163 7 0 chr10 6710824 6711150 -138878138 + AluSx SINE Alu 6 333 0 6049 85 7 7 chr10 6711522 6712335 -138876953 - L1PA10 LINE L1 -4 6164 5352 520 243 132 0 chr10 6712375 6712511 -138876777 + MER112 DNA MER1_type 97 250 -10 1811 146 17 3 chr10 6713130 6713417 -138875871 + AluJb SINE Alu 1 291 -21 462 254 0 9 chr10 6713700 6713814 -138875474 - MER94 DNA DNA -18 116 4 370 243 76 35 chr10 6714266 6714410 -138874878 - L2 LINE L2 -3 3310 3161 3650 192 21 11 chr10 6715007 6715057 -138874231 + L1MB3 LINE L1 5446 5494 -689 2370 98 0 0 chr10 6715057 6715352 -138873936 + AluSc SINE Alu 3 297 -12 3650 192 21 11 chr10 6715352 6716030 -138873258 + L1MB3 LINE L1 5494 6181 -2 507 238 33 50 chr10 6716055 6716236 -138873052 + MIR SINE MIR 14 191 -71 22 0 0 0 chr10 6716344 6716366 -138872922 + AT_rich Low_complexity Low_complexity 1 22 0 195 42 0 0 chr10 6716836 6716860 -138872428 + (CA)n Simple_repeat Simple_repeat 2 25 0 28 0 0 0 chr10 6719475 6719503 -138869785 + GC_rich Low_complexity Low_complexity 1 28 0 22 80 0 0 chr10 6719583 6719633 -138869655 + GC_rich Low_complexity Low_complexity 1 50 0 2075 134 7 0 chr10 6720565 6720857 -138868431 + AluSx SINE Alu 1 294 -18 195 225 0 0 chr10 6721238 6721278 -138868010 + L2 LINE L2 3262 3301 -12 1860 161 0 23 chr10 6721634 6721939 -138867349 - AluJo SINE Alu -14 298 1 453 272 23 46 chr10 6721947 6722120 -138867168 - MIR SINE MIR -55 207 39 2279 92 3 16 chr10 6722158 6722462 -138866826 - AluSx SINE Alu -12 300 1 225 0 0 0 chr10 6723828 6723853 -138865435 + (A)n Simple_repeat Simple_repeat 1 25 0 516 320 39 43 chr10 6724113 6724369 -138864919 - MIR SINE MIR 0 262 8 315 0 0 0 chr10 6725411 6725446 -138863842 + (CA)n Simple_repeat Simple_repeat 2 36 0 28 48 0 0 chr10 6726276 6726318 -138862970 + AT_rich Low_complexity Low_complexity 1 42 0 611 251 49 0 chr10 6726637 6726800 -138862488 - MIR SINE MIR -51 211 41 252 59 0 0 chr10 6726929 6726963 -138862325 + (CA)n Simple_repeat Simple_repeat 1 34 0 229 222 156 0 chr10 6726966 6727056 -138862232 - L1ME4a LINE L1 -56 6065 5962 22 0 0 0 chr10 6727065 6727087 -138862201 + AT_rich Low_complexity Low_complexity 1 22 0 1477 258 107 24 chr10 6728307 6728907 -138860381 + L1ME3A LINE L1 5500 6163 -7 200 252 0 75 chr10 6729216 6729323 -138859965 + CT-rich Low_complexity Low_complexity 1 99 0 2582 122 13 5 chr10 6729781 6730167 -138859121 + L1PB1 LINE L1 5763 6151 0 376 284 20 0 chr10 6731205 6731307 -138857981 + MIR3 SINE MIR 59 162 -46 183 329 0 53 chr10 6733003 6733079 -138856209 + L2 LINE L2 3019 3090 -223 463 276 16 16 chr10 6733155 6733278 -138856010 + L2 LINE L2 3191 3313 0 744 230 45 6 chr10 6733579 6733757 -138855531 - MLT1E2 LTR MaLR 0 626 442 466 299 5 45 chr10 6733967 6734168 -138855120 + L1ME1 LINE L1 5866 6058 -108 207 0 0 0 chr10 6734178 6734201 -138855087 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 1608 132 21 24 chr10 6734223 6734511 -138854777 - L1MA8 LINE L1 -24 6267 5981 424 239 78 25 chr10 6734535 6734655 -138854633 + L1ME2 LINE L1 6045 6178 0 577 189 0 0 chr10 6734747 6734842 -138854446 - L1MB1 LINE L1 -18 6150 6056 326 310 90 19 chr10 6736089 6736244 -138853044 - MIR SINE MIR -73 189 24 3215 155 53 24 chr10 6736648 6737268 -138852020 - L1MA8 LINE L1 -2 6289 5652 1100 182 81 4 chr10 6737849 6738096 -138851192 - L1MA4 LINE L1 -2 6298 6033 1440 127 115 44 chr10 6738096 6738454 -138850834 + MSTA LTR MaLR 1 428 0 225 111 22 0 chr10 6738454 6738499 -138850789 - L1MA4 LINE L1 -263 6037 5992 493 305 69 59 chr10 6738910 6739104 -138850184 - LTR16C LTR ERVL -2 489 289 2204 87 128 42 chr10 6739104 6739439 -138849849 - THE1B LTR MaLR 0 364 1 493 305 69 59 chr10 6739439 6739549 -138849739 - LTR16C LTR ERVL -202 289 182 393 248 16 48 chr10 6739742 6739867 -138849421 - MER117 DNA MER1_type -74 123 3 3717 151 0 6 chr10 6740481 6741010 -138848278 - MER1A DNA MER1_type -1 526 1 216 0 0 0 chr10 6741279 6741303 -138847985 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 400 325 12 30 chr10 6743058 6743227 -138846061 + LTR67 LTR ERVL 389 554 -3 207 0 0 0 chr10 6743542 6743565 -138845723 + (TG)n Simple_repeat Simple_repeat 1 23 0 418 353 22 27 chr10 6743776 6744184 -138845104 + ERVL LTR ERVL 904 1309 -4455 1381 169 98 128 chr10 6744211 6744719 -138844569 - MLT1D LTR MaLR 0 505 13 2446 69 3 0 chr10 6744952 6745255 -138844033 - AluY SINE Alu -7 304 1 245 186 85 0 chr10 6745843 6745902 -138843386 - MIR SINE MIR -2 260 197 2223 88 0 16 chr10 6745902 6746210 -138843078 - AluY SINE Alu -4 307 5 419 265 20 0 chr10 6746448 6746546 -138842742 - MIR SINE MIR -79 129 30 250 324 47 81 chr10 6747715 6748011 -138841277 - L2 LINE L2 -120 3152 2867 200 267 0 33 chr10 6748094 6748154 -138841134 - MIR SINE MIR -35 227 170 785 278 12 0 chr10 6748795 6748968 -138840320 - MER45A DNA AcHobo -1 177 3 220 330 33 0 chr10 6749238 6749329 -138839959 - L3b LINE CR1 -200 1383 1290 476 325 149 44 chr10 6749659 6750114 -138839174 - L2 LINE L2 -3 3310 2808 1236 249 291 29 chr10 6750165 6750795 -138838493 + LTR50 LTR ERVL 1 795 0 470 274 70 35 chr10 6750811 6751012 -138838276 - L2 LINE L2 -843 2471 2264 233 306 51 0 chr10 6751022 6751120 -138838168 - L2 LINE L2 -1223 2091 1989 4670 173 46 20 chr10 6751122 6752490 -138836798 + L1MB8 LINE L1 4768 6176 -2 207 350 81 0 chr10 6752518 6752641 -138836647 - L2 LINE L2 -1317 1997 1865 195 313 31 31 chr10 6752664 6752728 -138836560 - L2 LINE L2 -2048 1266 1203 2222 134 47 33 chr10 6753008 6753367 -138835921 + THE1B LTR MaLR 1 364 0 4782 108 14 47 chr10 6753797 6754540 -138834748 - L1PB1 LINE L1 -2 6149 5432 6749 223 67 103 chr10 6754542 6756036 -138833252 + Charlie6 DNA MER1_type 83 1630 -1870 554 270 0 0 chr10 6756036 6756151 -138833137 + FLAM_A SINE Alu 2 116 -17 2328 60 3 7 chr10 6756152 6756436 -138832852 - L1PA5 LINE L1 -3 6151 5869 1380 138 0 0 chr10 6756441 6756644 -138832644 + AluSg/x SINE Alu 105 307 -5 6749 223 67 103 chr10 6756644 6757470 -138831818 + Charlie6 DNA MER1_type 1634 2521 -979 2663 188 70 4 chr10 6757532 6758047 -138831241 + MER21A LTR ERV1 383 931 0 2371 82 0 3 chr10 6758129 6758432 -138830856 + AluSx SINE Alu 1 302 -10 233 121 0 0 chr10 6758432 6758465 -138830823 - MER41C LTR ERV1 -521 33 1 308 161 118 21 chr10 6758465 6758558 -138830730 - L1PB4 LINE L1 -127 6029 5928 2577 122 0 3 chr10 6758972 6759324 -138829964 - THE1B LTR MaLR 0 364 14 381 143 16 0 chr10 6759312 6759375 -138829913 - THE1B LTR MaLR -300 64 1 * 622 211 44 3 chr10 6760760 6760929 -138828359 - MER69A DNA AcHobo 0 177 4 207 69 0 0 chr10 6760995 6761024 -138828264 + (TG)n Simple_repeat Simple_repeat 1 29 0 1585 192 25 6 chr10 6761078 6761395 -138827893 + MLT1A1 LTR MaLR 1 323 -42 2463 85 66 22 chr10 6761951 6761971 -138827317 + L1PB1 LINE L1 5761 5779 -385 189 0 0 0 chr10 6761971 6761992 -138827296 + (TA)n Simple_repeat Simple_repeat 1 21 0 2463 85 66 22 chr10 6761992 6762359 -138826929 + L1PB1 LINE L1 5779 6164 0 403 151 27 0 chr10 6762796 6762869 -138826419 - MER116 DNA Mariner 0 80 6 1998 118 63 76 chr10 6762889 6763269 -138826019 + THE1C LTR MaLR 1 375 0 2036 158 25 14 chr10 6763844 6764212 -138825076 - L1MB3 LINE L1 -2 6181 5810 2148 144 0 0 chr10 6764266 6764572 -138824716 + AluSx SINE Alu 1 306 -6 348 322 41 0 chr10 6765242 6765363 -138823925 - L2 LINE L2 -1 3271 3146 215 304 55 69 chr10 6766093 6766310 -138822978 - L2 LINE L2 -161 3111 2898 236 234 0 0 chr10 6767093 6767140 -138822148 + L1ME4a LINE L1 5986 6032 -89 1364 252 13 10 chr10 6768854 6769316 -138819972 - MER90 LTR ERV1 -6 569 57 2041 130 0 7 chr10 6769473 6769786 -138819502 + AluSx SINE Alu 1 311 0 2329 164 56 7 chr10 6769952 6770397 -138818891 - L1MA7 LINE L1 0 6291 5825 347 174 138 87 chr10 6770880 6771018 -138818270 - L1ME4a LINE L1 0 6121 5977 200 359 98 0 chr10 6771018 6771110 -138818178 - L2 LINE L2 -8 3264 3164 2053 121 4 0 chr10 6771752 6772051 -138817237 + AluSq SINE Alu 11 313 0 319 196 188 54 chr10 6772909 6773021 -138816267 + MER5A DNA MER1_type 15 141 -48 4147 164 39 1 chr10 6773047 6773743 -138815545 - L1PA16 LINE L1 -9 6157 5436 290 298 18 35 chr10 6774466 6774580 -138814708 - MIR SINE MIR -116 146 35 1055 113 0 7 chr10 6774979 6775130 -138814158 + FRAM SINE Alu 19 168 -8 202 179 104 0 chr10 6775234 6775301 -138813987 - MIR SINE MIR -133 129 56 414 219 75 78 chr10 6775470 6775861 -138813427 + MLT1H LTR MaLR 23 533 -16 184 277 87 103 chr10 6775904 6776088 -138813200 + MIR SINE MIR 49 229 -33 1996 101 25 7 chr10 6777590 6777911 -138811377 + AluSq SINE Alu 1 326 0 401 344 81 18 chr10 6780121 6780342 -138808946 - MIR SINE MIR -2 260 26 1642 167 0 0 chr10 6780402 6780673 -138808615 - AluJo SINE Alu 0 306 36 1273 220 179 27 chr10 6780701 6781114 -138808174 - MER50 LTR ERV1 -19 715 240 281 264 195 0 chr10 6781848 6781935 -138807353 - MER50 LTR ERV1 -614 120 17 257 154 0 0 chr10 6782304 6782343 -138806945 + U2 snRNA snRNA 1 39 -149 465 292 78 5 chr10 6783328 6783520 -138805768 + MIR SINE MIR 47 252 -10 1188 104 12 0 chr10 6783859 6784023 -138805265 + AluSg/x SINE Alu 132 297 -13 2479 144 50 28 chr10 6784217 6784675 -138804613 - L1MB3 LINE L1 0 6183 5716 218 256 39 148 chr10 6785067 6785133 -138804155 - L2 LINE L2 -61 3211 3139 876 179 174 5 chr10 6785133 6785317 -138803971 - MER20 DNA MER1_type 0 219 5 218 256 39 148 chr10 6785317 6785453 -138803835 - L2 LINE L2 -133 3139 3031 3935 174 29 11 chr10 6785594 6785916 -138803372 + MER72 LTR ERV1 9 324 -398 2712 97 14 0 chr10 6785916 6786266 -138803022 + THE1A LTR MaLR 1 355 0 3935 174 29 11 chr10 6786266 6786644 -138802644 + MER72 LTR ERV1 324 721 -1 1870 250 65 55 chr10 6786661 6787349 -138801939 - MER21B LTR ERV1 -109 754 60 383 256 0 0 chr10 6787359 6787437 -138801851 - MER21B LTR ERV1 -765 98 21 498 216 32 64 chr10 6787597 6787722 -138801566 - MER91C DNA MER1_type -19 121 1 2352 91 0 0 chr10 6788170 6788478 -138800810 - AluY SINE Alu -3 308 1 237 285 159 26 chr10 6789970 6790121 -138799167 - MIR SINE MIR -50 212 42 195 139 0 0 chr10 6790538 6790574 -138798714 + (ATG)n Simple_repeat Simple_repeat 3 38 0 246 62 0 0 chr10 6791144 6791176 -138798112 + (TA)n Simple_repeat Simple_repeat 1 32 0 1575 167 15 11 chr10 6791529 6791793 -138797495 - AluJo SINE Alu -47 265 1 318 50 0 0 chr10 6792600 6792640 -138796648 + (CTATT)n Simple_repeat Simple_repeat 4 43 0 1673 160 0 80 chr10 6792646 6792959 -138796329 - AluJo SINE Alu -24 288 1 1811 161 0 55 chr10 6792960 6793290 -138795998 - AluSx SINE Alu 0 312 1 194 362 11 0 chr10 6793495 6793589 -138795699 + MIR SINE MIR 6 100 -162 682 259 93 22 chr10 6793839 6794117 -138795171 - L1M4 LINE L1 -2147 3999 3702 1739 132 19 75 chr10 6794456 6794584 -138794704 + AluJb SINE Alu 1 135 -177 2293 54 4 0 chr10 6794584 6794862 -138794426 + AluY SINE Alu 1 279 -32 1739 132 19 75 chr10 6794862 6795051 -138794237 + AluJb SINE Alu 135 300 -12 269 218 119 50 chr10 6795343 6795444 -138793844 + MIR SINE MIR 72 179 -83 22 35 0 0 chr10 6795631 6795660 -138793628 + AT_rich Low_complexity Low_complexity 1 29 0 959 90 0 7 chr10 6795669 6795814 -138793474 + (TCTA)n Simple_repeat Simple_repeat 1 144 0 242 36 0 0 chr10 6795827 6795855 -138793433 + (A)n Simple_repeat Simple_repeat 1 28 0 235 198 28 38 chr10 6798717 6798823 -138790465 + GA-rich Low_complexity Low_complexity 4 108 0 2422 81 0 0 chr10 6798985 6799282 -138790006 - AluSg SINE Alu -13 297 1 1178 87 6 0 chr10 6799990 6800163 -138789125 + (GGAGA)n Simple_repeat Simple_repeat 2 175 0 22 0 0 0 chr10 6800472 6800494 -138788794 + AT_rich Low_complexity Low_complexity 1 22 0 548 208 87 11 chr10 6800550 6800740 -138788548 + L1ME LINE L1 1357 1671 -4755 2733 232 58 8 chr10 6800748 6801901 -138787387 + L1ME LINE L1 4843 6052 -392 204 97 0 0 chr10 6802121 6802152 -138787136 + (T)n Simple_repeat Simple_repeat 1 31 0 216 0 0 0 chr10 6802929 6802953 -138786335 + (TG)n Simple_repeat Simple_repeat 1 24 0 1078 246 54 81 chr10 6804482 6805015 -138784273 - MER34 LTR ERV1 -23 519 1 1500 218 89 17 chr10 6806331 6806679 -138782609 + MLT1A2 LTR MaLR 1 373 -1 882 207 0 17 chr10 6806711 6806885 -138782403 + FRAM SINE Alu 1 170 -6 911 150 0 0 chr10 6807253 6807373 -138781915 + AluSq/x SINE Alu 1 123 -189 243 0 0 0 chr10 6807373 6807400 -138781888 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 911 150 0 0 chr10 6807400 6807412 -138781876 + AluSq/x SINE Alu 122 133 -179 1939 150 31 0 chr10 6807897 6808191 -138781097 - AluSx SINE Alu -9 303 1 623 225 0 47 chr10 6808219 6808348 -138780940 - FLAM_A SINE Alu -10 123 1 40 37 0 0 chr10 6808938 6808992 -138780296 + AT_rich Low_complexity Low_complexity 1 54 0 2458 54 0 7 chr10 6809107 6809403 -138779885 - AluY SINE Alu -17 294 1 187 349 58 41 chr10 6809446 6809618 -138779670 - MIR SINE MIR -56 206 32 339 345 22 36 chr10 6809647 6809786 -138779502 + MIR SINE MIR 5 141 -121 1971 208 84 2 chr10 6809838 6810280 -138779008 - MER70B LTR ERVL -100 478 1 222 203 47 47 chr10 6811433 6811497 -138777791 + MIR SINE MIR 199 262 0 1555 218 49 16 chr10 6812541 6812908 -138776380 - MLT1B LTR MaLR 0 390 12 414 267 75 43 chr10 6812913 6813081 -138776207 + MLT1I LTR MaLR 14 190 -219 2087 127 73 17 chr10 6813081 6813436 -138775852 + THE1C LTR MaLR 1 375 0 414 267 75 43 chr10 6813436 6813454 -138775834 + MLT1I LTR MaLR 190 206 -203 2171 96 0 17 chr10 6813470 6813761 -138775527 + AluSx SINE Alu 1 286 -26 318 26 0 0 chr10 6813764 6813803 -138775485 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 232 241 84 0 chr10 6813858 6813941 -138775347 + LTR66 LTR ERVL 352 441 -169 808 95 9 0 chr10 6813991 6814096 -138775192 - AluSg/x SINE Alu -17 295 190 225 323 0 0 chr10 6814354 6814416 -138774872 - MIR3 SINE MIR -28 180 119 7624 54 2 5 chr10 6815353 6816499 -138772789 - L1PA5 LINE L1 0 6154 5008 838 258 116 7 chr10 6816619 6816894 -138772394 + MLT1E3 LTR MaLR 317 621 -3 1011 265 75 131 chr10 6816896 6817821 -138771467 - Charlie2b DNA MER1_type -1865 917 45 3585 67 5 7 chr10 6818505 6818954 -138770334 + LTR7 LTR ERV1 1 448 -2 11206 87 18 39 chr10 6818956 6821287 -138768001 + HERVH LTR ERV1 1 2161 -5552 622 60 66 18 chr10 6822082 6822249 -138767039 + (TA)n Simple_repeat Simple_repeat 2 176 0 632 222 146 0 chr10 6823054 6823225 -138766063 + MER3 DNA MER1_type 14 209 0 382 318 117 25 chr10 6824649 6824888 -138764400 + MIR SINE MIR 1 261 -1 959 178 6 6 chr10 6824946 6825126 -138764162 - L1MA9 LINE L1 0 6312 6133 375 123 14 0 chr10 6825133 6825206 -138764082 + L1MDa LINE L1 1258 1331 -5209 309 214 17 79 chr10 6825190 6825309 -138763979 + L1 LINE L1 4262 4375 -1771 * 273 77 0 0 chr10 6827051 6827090 -138762198 + AluSc SINE Alu 255 293 -6 256 241 84 36 chr10 6827083 6827166 -138762122 + Charlie6 DNA MER1_type 3035 3121 -379 * 2194 88 7 0 chr10 6827424 6827698 -138761590 - AluSg SINE Alu -11 299 24 189 281 41 77 chr10 6828167 6828363 -138760925 - L2 LINE L2 -2178 1136 948 1544 189 49 11 chr10 6828778 6829128 -138760160 + MER110A LTR ERV1 55 417 -51 474 277 113 39 chr10 6829207 6829438 -138759850 - MIR SINE MIR -8 254 7 287 260 0 0 chr10 6830405 6830478 -138758810 - MLT1L LTR MaLR -4 611 539 3201 142 41 42 chr10 6830735 6831347 -138757941 - LTR36 LTR ERV1 0 611 1 474 143 65 0 chr10 6831354 6831431 -138757857 + MER31B LTR ERV1 1 82 -384 342 319 43 7 chr10 6831506 6831644 -138757644 - MER87 LTR ERV1 0 541 399 1925 186 44 42 chr10 6831953 6832382 -138756906 + MER67A LTR ERV1 101 530 -13 898 212 103 75 chr10 6832485 6832821 -138756467 - LTR35 LTR ERV1 0 679 188 1320 233 94 8 chr10 6833478 6833860 -138755428 - MER90 LTR ERV1 -2 612 198 35 0 0 0 chr10 6833864 6833899 -138755389 + AT_rich Low_complexity Low_complexity 1 35 0 406 277 18 24 chr10 6833965 6834131 -138755157 - MER90 LTR ERV1 -407 168 4 408 274 49 60 chr10 6834252 6834537 -138754751 - L2 LINE L2 0 3313 3032 2207 125 0 0 chr10 6835024 6835311 -138753977 - AluSx SINE Alu -22 290 4 255 254 0 0 chr10 6835899 6835962 -138753326 - L3 LINE CR1 -124 1453 1391 279 191 0 0 chr10 6835962 6836030 -138753258 + (TG)n Simple_repeat Simple_repeat 1 68 0 2217 135 0 0 chr10 6836201 6836513 -138752775 - AluSx SINE Alu 0 312 1 459 0 0 0 chr10 6836635 6836686 -138752602 + (TA)n Simple_repeat Simple_repeat 1 51 0 211 287 82 25 chr10 6836938 6837060 -138752228 + MIR SINE MIR 134 262 0 3614 49 0 7 chr10 6837541 6837992 -138751296 - LTR7 LTR ERV1 -2 448 1 2564 76 45 13 chr10 6837992 6838372 -138750916 - HERVH LTR ERV1 0 7713 7322 1454 125 19 0 chr10 6838370 6838586 -138750702 - HERVH LTR ERV1 -1894 5819 5600 * 4409 143 1 1 chr10 6838587 6839249 -138750039 - HERVH LTR ERV1 -2564 5149 4488 3303 117 8 10 chr10 6839251 6839754 -138749534 - HERVH LTR ERV1 -3720 3993 3492 948 133 7 0 chr10 6839744 6839894 -138749394 - HERVH LTR ERV1 -4423 3290 3140 * 5360 90 0 18 chr10 6839873 6840642 -138748646 - HERVH LTR ERV1 -4718 2995 2241 370 252 52 0 chr10 6840962 6841077 -138748211 + L1MA1 LINE L1 5817 5937 -365 * 955 51 0 0 chr10 6840995 6841112 -138748176 + L1PB1 LINE L1 5856 5972 -179 6769 59 15 27 chr10 6841114 6841809 -138747479 + L1PA6 LINE L1 4774 5476 -678 2220 115 0 3 chr10 6841809 6842113 -138747175 + AluY SINE Alu 1 303 -8 6769 59 15 27 chr10 6842113 6842430 -138746858 + L1PA6 LINE L1 5476 5795 -359 2377 89 0 22 chr10 6842430 6842746 -138746542 + AluY SINE Alu 1 309 -2 6769 59 15 27 chr10 6842746 6843123 -138746165 + L1PA6 LINE L1 5795 6153 -1 297 239 44 44 chr10 6843430 6843543 -138745745 - MER103 DNA DNA -13 153 41 267 156 0 0 chr10 6843806 6843851 -138745437 + L1ME2 LINE L1 6015 6059 -105 384 274 0 9 chr10 6843888 6843994 -138745294 + L1ME2 LINE L1 6041 6145 -19 217 416 9 0 chr10 6844037 6844150 -138745138 - MIR SINE MIR -68 140 27 2374 87 3 3 chr10 6845195 6845504 -138743784 + AluSg SINE Alu 1 309 -1 1170 112 0 0 chr10 6845819 6845841 -138743447 + (TTCC)n Simple_repeat Simple_repeat 1 200 0 1170 112 0 0 chr10 6845841 6846019 -138743269 + (TTCC)n Simple_repeat Simple_repeat 1 178 0 450 217 19 0 chr10 6846369 6846475 -138742813 - MLT2D LTR ERVL -274 140 33 198 71 0 0 chr10 6846767 6846795 -138742493 + (T)n Simple_repeat Simple_repeat 1 28 0 2685 94 11 5 chr10 6847852 6848225 -138741063 - THE1C LTR MaLR 0 375 1 356 318 155 0 chr10 6848339 6848487 -138740801 - MER5A DNA MER1_type -6 183 13 243 327 158 0 chr10 6848775 6848940 -138740348 - MIR3 SINE MIR -6 202 12 2115 273 73 28 chr10 6849634 6850410 -138738878 + MER63C DNA MER1_type 1 811 -119 575 286 12 30 chr10 6851323 6851491 -138737797 + MLT1F LTR MaLR 3 167 -375 288 255 0 106 chr10 6851584 6851678 -138737610 + MLT1F1 LTR MaLR 155 238 -329 858 225 68 9 chr10 6851713 6851935 -138737353 + MLT1F1 LTR MaLR 331 565 -2 2173 154 25 57 chr10 6852158 6852179 -138737109 - MLT1B LTR MaLR 0 390 370 2469 178 24 0 chr10 6852179 6852595 -138736693 + MSTB LTR MaLR 1 426 0 2173 154 25 57 chr10 6852595 6852976 -138736312 - MLT1B LTR MaLR -20 370 1 263 307 22 16 chr10 6853782 6853902 -138735386 - MIR SINE MIR -65 143 41 235 306 10 31 chr10 6854194 6854292 -138734996 - MIR3 SINE MIR -9 199 104 246 128 0 0 chr10 6854755 6854794 -138734494 + (TTC)n Simple_repeat Simple_repeat 2 40 0 1872 132 0 0 chr10 6854796 6855047 -138734241 - AluSx SINE Alu -61 251 1 1067 60 13 40 chr10 6855856 6856005 -138733283 - L1PA11 LINE L1 -3 6171 6027 225 0 0 0 chr10 6856013 6856038 -138733250 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 2003 138 0 0 chr10 6856040 6856323 -138732965 - AluSq SINE Alu -30 283 1 384 40 0 0 chr10 6857511 6857561 -138731727 + (TG)n Simple_repeat Simple_repeat 2 51 0 762 231 129 0 chr10 6858348 6858534 -138730754 + MER58A DNA MER1_type 4 213 -11 1766 163 3 33 chr10 6858748 6859048 -138730240 - AluSx SINE Alu -17 295 5 3092 182 63 6 chr10 6859140 6859771 -138729517 - LTR65 LTR ERV1 0 669 3 855 119 0 22 chr10 6860236 6860370 -138728918 - L1PB4 LINE L1 0 6156 6026 3035 158 37 27 chr10 6860370 6860932 -138728356 - MER41B LTR ERV1 0 635 68 262 280 206 0 chr10 6861554 6861661 -138727627 + MIR SINE MIR 70 198 -64 253 262 12 0 chr10 6862574 6862658 -138726630 + (CAGAGA)n Simple_repeat Simple_repeat 3 87 0 2297 114 22 30 chr10 6862667 6863034 -138726254 - THE1B LTR MaLR 0 364 1 377 286 36 56 chr10 6864181 6864377 -138724911 + MIR3 SINE MIR 17 208 0 1864 153 7 4 chr10 6864922 6865203 -138724085 + AluJb SINE Alu 1 282 -30 194 0 39 0 chr10 6865206 6865232 -138724056 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 297 183 0 32 chr10 6865283 6865376 -138723912 + CT-rich Low_complexity Low_complexity 2 91 0 287 188 0 0 chr10 6865935 6865983 -138723305 - MLT2B1 LTR ERVL 0 520 473 428 250 0 7 chr10 6865983 6866123 -138723165 + (TG)n Simple_repeat Simple_repeat 1 139 0 1022 212 81 79 chr10 6866123 6866551 -138722737 - MLT2B1 LTR ERVL -41 410 1 24 32 0 0 chr10 6867543 6867574 -138721714 + AT_rich Low_complexity Low_complexity 1 31 0 2458 101 3 0 chr10 6868219 6868556 -138720732 - L1PB1 LINE L1 -4 6147 5810 3968 172 79 24 chr10 6869124 6869907 -138719381 - LTR1B LTR ERV1 0 826 1 237 277 107 27 chr10 6870084 6870196 -138719092 + MIR3 SINE MIR 67 187 -21 555 268 30 25 chr10 6871110 6871308 -138717980 - MIR SINE MIR -55 207 9 4446 158 94 0 chr10 6872537 6873292 -138715996 + LTR1B LTR ERV1 1 826 0 272 280 0 59 chr10 6873424 6873542 -138715746 + L2 LINE L2 3103 3213 -100 276 320 59 39 chr10 6873781 6874037 -138715251 + L1ME LINE L1 5556 5816 -305 363 233 15 79 chr10 6874257 6874408 -138714880 + MIR SINE MIR 51 192 -63 245 328 82 34 chr10 6875980 6876170 -138713118 + L2 LINE L2 3029 3273 -40 251 262 163 73 chr10 6876280 6876513 -138712775 + MLT1H LTR MaLR 97 350 -199 236 200 57 43 chr10 6876527 6876597 -138712691 + MLT1I LTR MaLR 316 386 -23 731 178 3 0 chr10 6876964 6877320 -138711968 + (TG)n Simple_repeat Simple_repeat 1 357 0 390 293 29 32 chr10 6878864 6879103 -138710185 + L1ME4a LINE L1 5668 5904 -217 1556 152 10 37 chr10 6879180 6879476 -138709812 - AluJo SINE Alu -22 290 3 34 24 0 0 chr10 6879654 6879695 -138709593 + AT_rich Low_complexity Low_complexity 1 41 0 2412 67 0 29 chr10 6880008 6880324 -138708964 + AluY SINE Alu 1 307 -4 21 36 0 0 chr10 6880464 6880492 -138708796 + AT_rich Low_complexity Low_complexity 1 28 0 2296 113 3 0 chr10 6881143 6881454 -138707834 + AluSx SINE Alu 1 312 0 1791 219 40 80 chr10 6881775 6882379 -138706909 + MLT1G LTR MaLR 11 590 0 2011 194 90 12 chr10 6883535 6883717 -138705571 + MLT1C LTR MaLR 2 168 -299 261 0 0 0 chr10 6883717 6883746 -138705542 + (CA)n Simple_repeat Simple_repeat 1 29 0 2011 194 90 12 chr10 6883746 6883995 -138705293 + MLT1C LTR MaLR 168 467 0 1610 97 60 0 chr10 6884346 6884563 -138704725 + MER30 DNA MER1_type 1 230 0 468 102 45 0 chr10 6884821 6884909 -138704379 + CT-rich Low_complexity Low_complexity 4 95 0 1248 66 0 16 chr10 6884909 6885092 -138704196 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1993 123 20 3 chr10 6885108 6885400 -138703888 - AluSx SINE Alu -15 297 1 252 59 0 0 chr10 6886548 6886582 -138702706 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 319 303 73 0 chr10 6886583 6886692 -138702596 - L2 LINE L2 -15 3298 3182 406 321 75 0 chr10 6887953 6888087 -138701201 + L2 LINE L2 3129 3272 0 2167 123 7 0 chr10 6888916 6889225 -138700063 - AluSx SINE Alu 0 312 2 2294 176 31 12 chr10 6889467 6889892 -138699396 - MSTB2 LTR MaLR 0 457 25 917 126 6 27 chr10 6890436 6890619 -138698669 + (GGAA)n Simple_repeat Simple_repeat 1 179 0 425 133 19 29 chr10 6890628 6890733 -138698555 + GA-rich Low_complexity Low_complexity 2 105 0 252 184 0 0 chr10 6890877 6890926 -138698362 + GA-rich Low_complexity Low_complexity 4 52 0 196 275 121 33 chr10 6890963 6891054 -138698234 + L2 LINE L2 3171 3269 -3 2028 152 44 46 chr10 6891292 6891842 -138697446 + MLT2A2 LTR ERVL 1 554 0 234 0 0 0 chr10 6892828 6892854 -138696434 + (A)n Simple_repeat Simple_repeat 1 26 0 1454 40 10 25 chr10 6893124 6893326 -138695962 + HERVH LTR ERV1 7515 7713 0 3762 49 0 7 chr10 6893326 6893777 -138695511 + LTR7 LTR ERV1 1 448 -2 2792 184 59 0 chr10 6894291 6894817 -138694471 - MER74A LTR ERVL -1 557 1 303 96 0 0 chr10 6895303 6895355 -138693933 + (TTGG)n Simple_repeat Simple_repeat 4 55 0 1284 77 0 12 chr10 6895356 6895524 -138693764 - L1PA14 LINE L1 -4 6157 5992 247 200 0 57 chr10 6895524 6895594 -138693694 + C-rich Low_complexity Low_complexity 6 71 0 344 180 0 72 chr10 6895600 6895794 -138693494 + CT-rich Low_complexity Low_complexity 1 180 0 426 287 36 24 chr10 6896208 6896375 -138692913 + MER117 DNA MER1_type 22 190 -7 337 245 6 107 chr10 6896533 6896692 -138692596 + L1ME2 LINE L1 5577 5719 -402 1080 201 22 45 chr10 6896745 6896969 -138692319 - MER20 DNA MER1_type 0 219 1 2530 261 54 30 chr10 6897456 6898258 -138691030 - L1MEc LINE L1 -5554 842 22 248 161 35 11 chr10 6898445 6898532 -138690756 + (CATATA)n Simple_repeat Simple_repeat 5 93 0 1942 113 46 0 chr10 6898822 6899105 -138690183 - AluSx SINE Alu -16 296 1 2003 31 18 0 chr10 6899586 6899813 -138689475 - L1PA3 LINE L1 0 6155 5925 518 214 11 11 chr10 6899935 6900113 -138689175 + (CA)n Simple_repeat Simple_repeat 1 178 0 298 209 18 42 chr10 6900126 6900412 -138688876 + (CA)n Simple_repeat Simple_repeat 1 279 0 1366 215 80 43 chr10 6901168 6901605 -138687683 + L1ME2 LINE L1 5698 6150 -14 574 221 124 0 chr10 6902092 6902237 -138687051 - MIR SINE MIR -42 220 58 451 290 45 0 chr10 6902341 6902496 -138686792 - MIR3 SINE MIR -31 177 16 25 31 0 0 chr10 6902501 6902533 -138686755 + AT_rich Low_complexity Low_complexity 1 32 0 305 302 54 23 chr10 6902593 6902722 -138686566 - L3b LINE CR1 -6 1577 1445 1161 260 65 48 chr10 6904354 6905015 -138684273 + L1ME4a LINE L1 4037 4708 -1438 206 309 0 59 chr10 6905133 6905201 -138684087 + L2 LINE L2 3202 3265 -7 291 268 28 0 chr10 6906023 6906094 -138683194 - MLT1J LTR MaLR -335 176 104 268 166 102 25 chr10 6906430 6906549 -138682739 + L1ME4a LINE L1 5264 5392 -754 465 19 0 0 chr10 6907395 6907449 -138681839 + (CA)n Simple_repeat Simple_repeat 2 55 0 631 219 7 15 chr10 6907540 6907677 -138681611 - Charlie4 DNA MER1_type -2 1959 1824 227 79 26 0 chr10 6907903 6907941 -138681347 + (TC)n Simple_repeat Simple_repeat 1 39 0 559 256 50 33 chr10 6908062 6908304 -138680984 + L1ME4a LINE L1 5671 5916 -205 993 150 0 0 chr10 6909219 6909372 -138679916 + L1PA14 LINE L1 5819 5971 -190 1093 114 0 0 chr10 6909472 6909639 -138679649 - HERVH LTR ERV1 -1947 5766 5600 4331 143 9 1 chr10 6909640 6910297 -138678991 - HERVH LTR ERV1 -2564 5149 4488 3224 130 0 12 chr10 6910299 6910799 -138678489 - HERVH LTR ERV1 -3720 3993 3500 * 19440 101 59 57 chr10 6910798 6914080 -138675208 - HERVH LTR ERV1 -4423 3290 1 3724 58 0 7 chr10 6914082 6914533 -138674755 - LTR7 LTR ERV1 -2 448 1 267 299 154 0 chr10 6914553 6914670 -138674618 - L2 LINE L2 0 3313 3179 233 323 42 31 chr10 6915200 6915296 -138673992 - MIR3 SINE MIR -27 181 85 44711 44 2 2 chr10 6915723 6921881 -138667407 - L1PA3 LINE L1 0 6155 1 391 326 176 19 chr10 6922317 6922676 -138666612 + L2 LINE L2 2197 2611 -703 213 39 0 0 chr10 6923742 6923768 -138665520 + (TTTTC)n Simple_repeat Simple_repeat 3 28 0 1814 167 3 19 chr10 6923787 6924104 -138665184 - AluJb SINE Alu 0 312 1 183 279 0 33 chr10 6924229 6924290 -138664998 + L2 LINE L2 3210 3268 -4 21 71 0 0 chr10 6925771 6925813 -138663475 + AT_rich Low_complexity Low_complexity 1 42 0 187 245 0 128 chr10 6925968 6926070 -138663218 - MIR SINE MIR -50 212 124 378 302 47 9 chr10 6926433 6926581 -138662707 + MIR SINE MIR 8 161 -47 206 276 351 0 chr10 6927344 6927478 -138661810 + MER5A DNA MER1_type 9 189 0 2307 115 3 0 chr10 6928120 6928507 -138660781 - AluSq SINE Alu 0 388 1 360 286 71 33 chr10 6928672 6928854 -138660434 + MIR SINE MIR 20 208 -54 2057 149 0 0 chr10 6929024 6929326 -138659962 - AluSx SINE Alu -10 302 1 315 269 59 0 chr10 6930492 6930611 -138658677 - MER76 LTR ERV 0 688 563 456 216 98 26 chr10 6931102 6931296 -138657992 - MER76 LTR ERV -102 586 379 303 213 13 27 chr10 6932358 6932433 -138656855 - MER45A DNA AcHobo 0 178 105 2118 135 3 0 chr10 6932438 6932742 -138656546 + AluSx SINE Alu 1 305 -7 998 204 129 8 chr10 6932761 6933001 -138656287 + AluJo SINE Alu 13 281 -31 424 216 137 0 chr10 6933011 6933113 -138656175 - MER45A DNA AcHobo -61 117 2 1070 157 5 14 chr10 6933751 6933967 -138655321 + L1MA4 LINE L1 6084 6297 -3 2185 98 32 0 chr10 6934402 6934687 -138654601 + AluSq SINE Alu 5 298 -15 507 155 83 0 chr10 6934697 6934781 -138654507 + AluJ/FLAM SINE Alu 1 91 -221 396 281 70 41 chr10 6934975 6935146 -138654142 + L2 LINE L2 3096 3271 -1 24 0 0 0 chr10 6935332 6935356 -138653932 + AT_rich Low_complexity Low_complexity 1 24 0 198 304 0 14 chr10 6935664 6935733 -138653555 + MIR SINE MIR 100 167 -95 7977 67 3 2 chr10 6935756 6936724 -138652564 - LTR5 LTR ERVK 0 969 1 434 63 11 168 chr10 6936724 6936819 -138652469 - SVA Other Other -450 936 857 12928 49 1 0 chr10 6936819 6938479 -138650809 - HERVK LTR ERVK -95 7148 5533 43625 43 4 3 chr10 6938724 6944251 -138645037 - HERVK LTR ERVK -1710 5533 1 7892 78 2 1 chr10 6944251 6945219 -138644069 - LTR5 LTR ERVK 0 969 1 340 125 113 12 chr10 6945603 6945683 -138643605 - MER112 DNA MER1_type -36 224 137 225 338 73 22 chr10 6945945 6946081 -138643207 + MIR SINE MIR 66 208 -54 180 0 0 0 chr10 6946116 6946136 -138643152 + (TG)n Simple_repeat Simple_repeat 1 20 0 258 195 47 47 chr10 6946354 6946523 -138642765 + (TA)n Simple_repeat Simple_repeat 2 170 0 * 564 279 0 0 chr10 6946518 6946697 -138642591 + (CATATA)n Simple_repeat Simple_repeat 2 180 0 543 283 0 0 chr10 6946669 6946849 -138642439 + (TA)n Simple_repeat Simple_repeat 1 180 0 * 279 268 0 0 chr10 6946867 6947046 -138642242 + (TA)n Simple_repeat Simple_repeat 1 179 0 466 174 48 0 chr10 6947113 6947280 -138642008 + (TA)n Simple_repeat Simple_repeat 1 175 0 257 209 44 0 chr10 6947296 6947454 -138641834 + (TA)n Simple_repeat Simple_repeat 1 165 0 415 189 28 33 chr10 6947474 6947654 -138641634 + (TA)n Simple_repeat Simple_repeat 1 179 0 471 193 17 28 chr10 6947679 6947860 -138641428 + (TA)n Simple_repeat Simple_repeat 2 180 0 249 222 22 22 chr10 6947875 6947965 -138641323 + L1MC4 LINE L1 6614 6703 -1339 664 231 17 6 chr10 6947976 6948334 -138640954 + (TA)n Simple_repeat Simple_repeat 1 362 0 374 188 44 0 chr10 6948404 6948564 -138640724 + (TA)n Simple_repeat Simple_repeat 2 168 0 564 214 0 0 chr10 6948579 6948757 -138640531 + (TA)n Simple_repeat Simple_repeat 2 179 0 312 284 0 0 chr10 6948759 6948847 -138640441 + L1MC4 LINE L1 6616 6703 -1339 239 381 102 0 chr10 6949573 6949691 -138639597 - L2 LINE L2 -5 3267 3138 242 275 0 12 chr10 6950703 6950783 -138638505 - L1M4 LINE L1 -1537 4609 4531 256 281 216 45 chr10 6950820 6951019 -138638269 + L2 LINE L2 3080 3312 -1 213 366 11 21 chr10 6952373 6952466 -138636822 + MIR SINE MIR 30 121 -87 2231 118 170 5 chr10 6953633 6954050 -138635238 + LTR19A LTR ERV1 1 486 0 384 313 154 5 chr10 6954222 6954436 -138634852 - MIR SINE MIR -2 260 15 200 320 26 13 chr10 6955411 6955489 -138633799 - MIR3 SINE MIR -23 185 107 1542 101 38 0 chr10 6956250 6956459 -138632829 + AluSq SINE Alu 91 307 -6 3577 216 102 49 chr10 6956477 6957425 -138631863 + Charlie1a DNA MER1_type 56 1097 -1664 1049 23 78 0 chr10 6957425 6957554 -138631734 + MER85 DNA T2_type 1 139 0 3577 216 102 49 chr10 6957554 6957934 -138631354 + Charlie1a DNA MER1_type 1097 1455 0 677 272 27 13 chr10 6957962 6958186 -138631102 + L2 LINE L2 3085 3311 -2 225 303 137 63 chr10 6958622 6958797 -138630491 + L3 LINE CR1 879 1066 -511 338 330 140 28 chr10 6958822 6959143 -138630145 + L3 LINE CR1 1171 1527 -50 2159 96 11 0 chr10 6959283 6959564 -138629724 - AluSp SINE Alu -29 284 1 2071 158 3 0 chr10 6959931 6960241 -138629047 - AluJb SINE Alu -1 311 1 1943 240 58 24 chr10 6960521 6961262 -138628026 + L1M4 LINE L1 4310 5075 -1071 296 230 118 31 chr10 6961320 6961484 -138627804 + L1MDa LINE L1 1798 1992 -909 370 226 9 0 chr10 6961487 6961593 -138627695 + L1M4 LINE L1 5106 5212 -934 1174 186 79 28 chr10 6961594 6961847 -138627441 - AluJo SINE Alu -46 266 1 689 88 18 9 chr10 6961849 6961962 -138627326 + Tigger3(Golem) DNA MER2_type 2767 2880 -149 22 0 0 0 chr10 6962343 6962365 -138626923 + AT_rich Low_complexity Low_complexity 1 22 0 231 200 27 13 chr10 6962844 6962919 -138626369 - L1ME4a LINE L1 -2 6119 6044 1871 129 14 0 chr10 6963526 6963806 -138625482 + AluSx SINE Alu 1 284 -28 252 0 0 0 chr10 6963806 6963834 -138625454 + (TA)n Simple_repeat Simple_repeat 2 29 0 364 259 49 63 chr10 6964664 6964807 -138624481 - MIR SINE MIR -55 207 67 2134 118 7 0 chr10 6964961 6965257 -138624031 + AluSq SINE Alu 1 298 -15 283 200 124 0 chr10 6965357 6965462 -138623826 - L1ME4a LINE L1 -44 6077 5960 1973 165 14 6 chr10 6965580 6965943 -138623345 - L1MB1 LINE L1 -4 6164 5799 432 0 0 0 chr10 6965943 6965991 -138623297 + (CA)n Simple_repeat Simple_repeat 1 48 0 2143 168 8 26 chr10 6965995 6966647 -138622641 - L1MB1 LINE L1 -503 5665 5025 525 307 4 12 chr10 6966651 6966895 -138622393 - L1ME4a LINE L1 -297 5824 5583 262 259 17 0 chr10 6967923 6967981 -138621307 - MER91A DNA MER1_type -106 90 32 205 259 94 24 chr10 6968006 6968091 -138621197 + MIR SINE MIR 1 91 -171 221 311 30 52 chr10 6968144 6968279 -138621009 + L3 LINE CR1 1298 1429 -148 354 91 0 0 chr10 6968678 6968733 -138620555 + (TG)n Simple_repeat Simple_repeat 2 56 0 229 308 13 26 chr10 6969483 6969561 -138619727 + MIR3 SINE MIR 84 160 -48 189 0 0 0 chr10 6969628 6969649 -138619639 + (TTA)n Simple_repeat Simple_repeat 2 22 0 978 25 0 17 chr10 6969681 6969801 -138619487 - L1PA3 LINE L1 -1 6154 6037 22070 27 0 0 chr10 6969801 6973174 -138616114 + L1PA2 LINE L1 2643 6057 -98 2980 204 55 48 chr10 6973198 6974147 -138615141 - L1MC3 LINE L1 -7 7778 6824 699 202 165 77 chr10 6974395 6974850 -138614438 - MER66A LTR ERV1 -52 435 100 583 215 0 0 chr10 6975324 6975431 -138613857 - MER5A DNA MER1_type -82 107 1 306 363 108 20 chr10 6975918 6976122 -138613166 - L2 LINE L2 -1 3271 3050 2364 109 3 0 chr10 6976212 6976524 -138612764 - AluSq SINE Alu 0 313 1 184 146 21 21 chr10 6977706 6977754 -138611534 + CT-rich Low_complexity Low_complexity 3 50 0 1072 110 0 11 chr10 6977992 6978174 -138611114 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 303 175 0 0 chr10 6978178 6978235 -138611053 + CT-rich Low_complexity Low_complexity 2 58 0 298 332 133 13 chr10 6980422 6980732 -138608556 + L2 LINE L2 2798 3233 -39 2205 144 67 22 chr10 6980754 6981133 -138608155 + L1MB3 LINE L1 5739 6140 -43 2274 89 0 30 chr10 6981133 6981435 -138607853 + AluSx SINE Alu 1 293 -19 2205 144 67 22 chr10 6981435 6981472 -138607816 + L1MB3 LINE L1 6140 6174 -9 256 276 149 11 chr10 6982131 6982218 -138607070 - L2 LINE L2 -10 3262 3164 1891 115 0 14 chr10 6982616 6982895 -138606393 - AluSx SINE Alu 0 312 38 2482 138 53 19 chr10 6983280 6983693 -138605595 - MSTA LTR MaLR 0 428 2 354 237 30 46 chr10 6983948 6984079 -138605209 - MLT1K LTR MaLR -14 574 446 243 259 24 47 chr10 6984172 6984257 -138605031 - MLT1K LTR MaLR -341 247 165 187 290 43 29 chr10 6984709 6984778 -138604510 + L2 LINE L2 2970 3039 -274 364 289 79 9 chr10 6985079 6985193 -138604095 + L2 LINE L2 3192 3313 0 2076 101 17 10 chr10 6985215 6985512 -138603776 - AluSx SINE Alu -13 299 1 330 26 0 0 chr10 6986235 6986274 -138603014 + (CA)n Simple_repeat Simple_repeat 2 40 0 243 297 27 27 chr10 6986359 6986470 -138602818 - MIR SINE MIR -92 170 60 1718 164 25 0 chr10 6987383 6987663 -138601625 + AluJo SINE Alu 1 287 -25 276 53 0 0 chr10 6987665 6987703 -138601585 + (TC)n Simple_repeat Simple_repeat 1 38 0 1384 284 34 27 chr10 6987716 6988308 -138600980 - MER74B LTR ERVL -14 608 13 267 284 136 52 chr10 6989596 6989751 -138599537 - MIR3 SINE MIR -21 187 20 2182 124 7 0 chr10 6990328 6990635 -138598653 + AluSg SINE Alu 1 309 -1 345 261 0 0 chr10 6991257 6991345 -138597943 - L2 LINE L2 -1 3312 3225 1758 159 24 7 chr10 6992116 6992406 -138596882 - AluJb SINE Alu -17 295 1 208 336 133 9 chr10 6992704 6992817 -138596471 + MIR SINE MIR 26 152 -110 2093 100 24 0 chr10 6993488 6993777 -138595511 + AluY SINE Alu 1 296 -15 2459 196 30 2 chr10 6994628 6994739 -138594549 + LOR1a LTR ERV1 1 107 -390 2287 123 0 0 chr10 6994739 6995047 -138594241 - AluSx SINE Alu -4 308 1 2459 196 30 2 chr10 6995047 6995410 -138593878 + LOR1a LTR ERV1 107 488 -9 237 232 29 43 chr10 6995980 6996049 -138593239 + MER5B DNA MER1_type 1 68 -110 675 236 133 5 chr10 6996054 6996249 -138593039 + L1M4 LINE L1 4716 4935 -1211 257 318 40 103 chr10 6996601 6996752 -138592536 + MIR SINE MIR 54 188 -74 2145 137 0 0 chr10 6996752 6997059 -138592229 - AluSx SINE Alu -5 307 1 257 318 40 103 chr10 6997059 6997130 -138592158 + MIR SINE MIR 188 262 0 214 365 14 73 chr10 6997346 6997518 -138591770 + MIR SINE MIR 31 189 -73 2450 145 0 0 chr10 6997518 6997855 -138591433 + MER1B DNA MER1_type 1 337 0 214 365 14 73 chr10 6997855 6997901 -138591387 + MIR SINE MIR 189 236 -26 1590 129 22 0 chr10 6998035 6998260 -138591028 - MER30 DNA MER1_type 0 230 1 197 300 67 11 chr10 6998260 6998344 -138590944 - MIR3 SINE MIR -12 196 108 39 84 0 0 chr10 6998804 6998899 -138590389 + AT_rich Low_complexity Low_complexity 1 95 0 203 295 168 32 chr10 6999042 6999137 -138590151 + MIR SINE MIR 37 144 -64 217 269 281 44 chr10 7000051 7000211 -138589077 - MIR3 SINE MIR -5 203 6 813 210 0 31 chr10 7000232 7000394 -138588894 + AluJo SINE Alu 126 282 -30 24 0 0 0 chr10 7000394 7000418 -138588870 + AT_rich Low_complexity Low_complexity 1 24 0 271 218 0 0 chr10 7000517 7000572 -138588716 - L1MC4 LINE L1 -1 8041 7987 1014 254 196 42 chr10 7000574 7001144 -138588144 - L1MC4 LINE L1 -144 7898 7241 1194 240 80 27 chr10 7001149 7001627 -138587661 - L1MC4 LINE L1 -810 7083 6500 295 178 14 14 chr10 7001635 7001708 -138587580 + CT-rich Low_complexity Low_complexity 3 75 0 357 240 7 32 chr10 7001708 7001818 -138587470 - L1MC4 LINE L1 -1454 6549 6431 827 204 4 116 chr10 7002624 7002873 -138586415 - MLT1B LTR MaLR -2 388 168 405 193 148 0 chr10 7002873 7002961 -138586327 + LOR1b LTR ERV1 1 101 -360 766 256 9 9 chr10 7002970 7003181 -138586107 + L1PBa LINE L1 6 216 -6647 * 2323 156 8 18 chr10 7003158 7003589 -138585699 + L1PBa LINE L1 1392 1902 -4960 180 0 0 0 chr10 7004328 7004348 -138584940 + (T)n Simple_repeat Simple_repeat 1 20 0 294 58 0 58 chr10 7004533 7004585 -138584703 - FAM SINE Alu 0 179 131 886 165 0 0 chr10 7004601 7004734 -138584554 - FLAM_C SINE Alu 0 133 1 325 220 92 18 chr10 7005282 7005391 -138583897 - MER91A DNA MER1_type -25 171 55 218 190 0 17 chr10 7006388 7006446 -138582842 + CT-rich Low_complexity Low_complexity 4 60 0 360 0 0 0 chr10 7007916 7007956 -138581332 + (TG)n Simple_repeat Simple_repeat 2 41 0 843 300 80 34 chr10 7010034 7010648 -138578640 - HAL1b LINE L1 -475 873 232 2035 114 11 0 chr10 7010697 7011134 -138578154 + AluSx SINE Alu 1 440 0 646 164 68 41 chr10 7012254 7012348 -138576940 + MER39 LTR ERV1 558 659 -48 2684 163 19 0 chr10 7012348 7012766 -138576522 - MSTB LTR MaLR 0 426 1 646 164 68 41 chr10 7012766 7012817 -138576471 + MER39 LTR ERV1 659 707 0 690 198 52 66 chr10 7014435 7014647 -138574641 + MER39 LTR ERV1 393 601 -106 838 52 0 0 chr10 7014647 7014743 -138574545 + AluYb8 SINE Alu 10 105 -213 1265 113 0 0 chr10 7014844 7015012 -138574276 - AluSx SINE Alu -144 168 1 453 298 6 38 chr10 7015746 7015904 -138573384 + MIR SINE MIR 2 154 -108 915 164 224 27 chr10 7016247 7016430 -138572858 - MER20 DNA MER1_type 0 219 1 184 324 14 14 chr10 7016573 7016647 -138572641 + L2 LINE L2 2682 2755 -559 319 133 0 27 chr10 7016774 7016849 -138572439 + (CA)n Simple_repeat Simple_repeat 2 74 0 323 350 108 54 chr10 7016853 7017224 -138572064 + L2 LINE L2 2874 3264 -8 410 304 89 54 chr10 7017983 7018107 -138571181 + MIR SINE MIR 31 168 -94 197 65 32 0 chr10 7018107 7018138 -138571150 + (TAGA)n Simple_repeat Simple_repeat 1 32 0 410 304 89 54 chr10 7018138 7018237 -138571051 + MIR SINE MIR 168 262 0 717 45 18 9 chr10 7018381 7018492 -138570796 + (GA)n Simple_repeat Simple_repeat 1 112 0 297 244 62 62 chr10 7019278 7019438 -138569850 + MIR SINE MIR 48 207 -55 203 297 63 92 chr10 7020740 7020979 -138568309 - L2 LINE L2 -108 3164 2933 854 144 8 0 chr10 7021010 7021142 -138568146 - MER4A LTR ERV1 0 664 532 876 324 57 0 chr10 7021151 7021487 -138567801 - L2 LINE L2 -942 2372 2018 243 302 47 81 chr10 7021750 7021786 -138567502 + L3 LINE CR1 1432 1468 -109 1637 202 125 46 chr10 7021786 7022266 -138567022 - MLT2B1 LTR ERVL -2 518 1 243 302 47 81 chr10 7022266 7022378 -138566910 + L3 LINE CR1 1468 1575 -2 2184 120 7 7 chr10 7022430 7022739 -138566549 + AluSx SINE Alu 1 309 -3 2258 88 0 7 chr10 7023926 7024231 -138565057 + AluSc SINE Alu 1 303 -6 207 0 0 0 chr10 7024330 7024353 -138564935 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 22 0 0 0 chr10 7024417 7024439 -138564849 + AT_rich Low_complexity Low_complexity 1 22 0 855 300 31 28 chr10 7024610 7024963 -138564325 - L1MC4a LINE L1 -1866 5942 5589 427 332 69 40 chr10 7024975 7025725 -138563563 - L1MC4a LINE L1 -1699 4447 3676 3687 244 64 24 chr10 7025922 7026035 -138563253 + L1ME2 LINE L1 4145 4252 -1912 1889 116 4 0 chr10 7026035 7026303 -138562985 + AluSx SINE Alu 44 312 0 3687 244 64 24 chr10 7026303 7026546 -138562742 + L1ME2 LINE L1 4252 4484 -1680 2105 142 49 27 chr10 7026546 7026912 -138562376 - THE1C LTR MaLR -1 374 1 3687 244 64 24 chr10 7026912 7028505 -138560783 + L1ME2 LINE L1 4484 6164 0 637 311 121 34 chr10 7028556 7029118 -138560170 + L1ME4a LINE L1 5499 6109 -12 564 327 133 7 chr10 7029777 7030055 -138559233 + L3b LINE CR1 1171 1483 -100 2495 185 150 28 chr10 7030278 7031116 -138558172 - LTR28 LTR ERV1 0 1020 3 200 196 0 18 chr10 7032342 7032398 -138556890 + GA-rich Low_complexity Low_complexity 2 56 0 463 287 0 0 chr10 7032416 7032524 -138556764 + MER34 LTR ERV1 1 108 -434 * 750 267 40 63 chr10 7032506 7033032 -138556256 + MER34 LTR ERV1 34 540 -2 515 272 44 81 chr10 7033629 7033663 -138555625 + MIR SINE MIR 1 35 -227 2175 129 3 3 chr10 7033663 7033974 -138555314 + AluSq SINE Alu 1 311 -2 515 272 44 81 chr10 7033974 7034129 -138555159 + MIR SINE MIR 35 180 -82 1911 151 7 7 chr10 7034129 7034427 -138554861 + AluJo SINE Alu 7 304 -8 515 272 44 81 chr10 7034427 7034508 -138554780 + MIR SINE MIR 180 262 0 2159 115 0 38 chr10 7034669 7034983 -138554305 + AluSx SINE Alu 1 302 -10 1983 132 3 3 chr10 7035241 7035536 -138553752 - AluSc SINE Alu -14 295 1 681 146 18 9 chr10 7036352 7036462 -138552826 + MSTB LTR MaLR 2 112 -314 1839 73 146 137 chr10 7036466 7037024 -138552264 - LTR12 LTR ERV1 0 714 5 1639 195 26 3 chr10 7037024 7037326 -138551962 + MSTB LTR MaLR 118 426 0 2643 159 33 7 chr10 7037326 7037779 -138551509 - Tigger5 DNA MER2_type -24 2299 1835 1048 186 68 41 chr10 7037771 7037991 -138551297 - Tigger5 DNA MER2_type -2097 226 1 * 1452 190 93 22 chr10 7037997 7038318 -138550970 - MER2 DNA MER2_type 0 344 1 281 301 36 12 chr10 7038513 7038596 -138550692 + L2 LINE L2 2989 3073 -199 201 74 0 0 chr10 7038806 7038833 -138550455 + (TGAA)n Simple_repeat Simple_repeat 4 30 0 1600 161 169 21 chr10 7038898 7039270 -138550018 + MSTC LTR MaLR 2 428 0 282 29 0 0 chr10 7039758 7039793 -138549495 + (GA)n Simple_repeat Simple_repeat 2 36 0 584 234 51 13 chr10 7040163 7040321 -138548967 + MER5B DNA MER1_type 1 164 -14 411 259 20 26 chr10 7040390 7040538 -138548750 + MER21B LTR ERV1 17 197 -408 1400 296 54 51 chr10 7040596 7041188 -138548100 + MER21B LTR ERV1 159 752 -111 874 166 13 26 chr10 7041201 7041352 -138547936 - MER63 DNA MER1_type -56 780 6 949 192 0 0 chr10 7042273 7042424 -138546864 + FRAM SINE Alu 4 154 -12 201 74 0 0 chr10 7042482 7042509 -138546779 + (CA)n Simple_repeat Simple_repeat 2 28 0 901 228 67 0 chr10 7042693 7042886 -138546402 + MER3 DNA MER1_type 4 209 0 2254 180 5 18 chr10 7042947 7043341 -138545947 - MLT1B LTR MaLR -1 389 1 2201 127 0 0 chr10 7043781 7044081 -138545207 - AluSx SINE Alu -12 300 1 256 227 27 40 chr10 7044384 7044459 -138544829 + MIR SINE MIR 189 262 0 463 321 77 47 chr10 7044740 7045482 -138543806 - L1M4 LINE L1 -1699 4447 3684 385 311 78 15 chr10 7045522 7045792 -138543496 - L1M4 LINE L1 -2731 3415 3129 534 161 200 89 chr10 7045969 7046118 -138543170 + MER3 DNA MER1_type 1 175 -34 2399 90 7 0 chr10 7046118 7046417 -138542871 + AluSc SINE Alu 1 301 -8 534 161 200 89 chr10 7046417 7046447 -138542841 + MER3 DNA MER1_type 175 200 -9 191 141 51 0 chr10 7046567 7046645 -138542643 + (TA)n Simple_repeat Simple_repeat 2 83 0 941 158 13 6 chr10 7047355 7047513 -138541775 + AluSg/x SINE Alu 146 304 -8 256 310 207 19 chr10 7047633 7047846 -138541442 + MIR SINE MIR 1 253 -9 967 229 128 81 chr10 7048476 7048983 -138540305 - MER34B LTR ERV1 0 565 35 836 189 78 0 chr10 7049001 7049154 -138540134 - MER58A DNA MER1_type -34 190 26 21 36 0 0 chr10 7049236 7049264 -138540024 + AT_rich Low_complexity Low_complexity 1 28 0 441 322 46 66 chr10 7049507 7049924 -138539364 + L2 LINE L2 2196 2681 -633 1908 173 0 3 chr10 7049924 7050237 -138539051 + AluJb SINE Alu 1 312 0 441 322 46 66 chr10 7050237 7050308 -138538980 + L2 LINE L2 2681 2752 -562 6197 17 6 0 chr10 7050308 7051454 -138537834 + L1PA3 LINE L1 4812 5961 -194 289 336 55 23 chr10 7052027 7052155 -138537133 + L2 LINE L2 3134 3265 -7 2125 138 7 0 chr10 7052205 7052509 -138536779 + AluSx SINE Alu 1 306 -6 2256 116 3 0 chr10 7052518 7052819 -138536469 + AluSx SINE Alu 1 302 -10 21 0 0 0 chr10 7053437 7053458 -138535830 + AT_rich Low_complexity Low_complexity 1 21 0 3504 117 71 11 chr10 7053761 7054284 -138535004 + MER41C LTR ERV1 1 554 0 220 283 17 0 chr10 7054431 7054491 -138534797 + CT-rich Low_complexity Low_complexity 2 62 0 192 343 45 0 chr10 7055175 7055242 -138534046 + MIR SINE MIR 41 110 -152 5377 191 17 27 chr10 7055520 7057165 -138532123 + L1PB3 LINE L1 4177 5793 -361 198 0 0 0 chr10 7057165 7057187 -138532101 + (TA)n Simple_repeat Simple_repeat 2 23 0 5377 191 17 27 chr10 7057187 7057546 -138531742 + L1PB3 LINE L1 5793 6154 0 3204 161 49 12 chr10 7057563 7058133 -138531155 + L1MB3 LINE L1 5586 6176 -7 1354 167 42 141 chr10 7058318 7058750 -138530538 - MLT1B LTR MaLR -1 389 1 2427 118 49 26 chr10 7059109 7059311 -138529977 + L1PB2 LINE L1 5748 5944 -207 2892 91 8 6 chr10 7059311 7059674 -138529614 - THE1B LTR MaLR 0 364 1 2427 118 49 26 chr10 7059674 7059862 -138529426 + L1PB2 LINE L1 5944 6147 -4 231 315 0 0 chr10 7060283 7060356 -138528932 + (CA)n Simple_repeat Simple_repeat 2 74 0 1296 150 4 26 chr10 7061748 7061981 -138527307 + AluJb SINE Alu 85 312 0 679 226 14 2 chr10 7062950 7063161 -138526127 + MLT1C LTR MaLR 223 467 0 219 363 60 27 chr10 7063187 7063520 -138525768 - L2 LINE L2 -840 2474 2131 836 251 69 20 chr10 7064359 7064850 -138524438 + MLT1E3 LTR MaLR 60 620 -4 219 186 0 0 chr10 7064997 7065040 -138524248 - L2 LINE L2 0 3313 3271 925 193 33 47 chr10 7066574 7066786 -138522502 + AluJo SINE Alu 1 209 -103 225 439 9 0 chr10 7066883 7066997 -138522291 + L2 LINE L2 3139 3253 -19 258 281 162 12 chr10 7068112 7068279 -138521009 - L1MC/D LINE L1 -1953 5855 5664 23 0 0 0 chr10 7068549 7068572 -138520716 + AT_rich Low_complexity Low_complexity 1 23 0 615 273 24 75 chr10 7068788 7069054 -138520234 + MIR SINE MIR 5 258 -4 271 314 0 0 chr10 7070194 7070264 -138519024 - L2 LINE L2 -18 3254 3185 805 113 9 9 chr10 7070271 7070386 -138518902 - THE1B LTR MaLR -8 356 242 419 276 134 42 chr10 7070414 7070875 -138518413 - L2 LINE L2 -221 3092 2594 2124 139 0 13 chr10 7072225 7072541 -138516747 + AluSx SINE Alu 1 312 0 400 325 64 43 chr10 7072734 7073014 -138516274 - L1ME LINE L1 -408 5754 5469 1502 186 25 94 chr10 7073069 7073194 -138516094 + MLT1A1 LTR MaLR 1 133 -232 2461 126 31 20 chr10 7073194 7073552 -138515736 + THE1B LTR MaLR 1 362 -2 1502 186 25 94 chr10 7073552 7073818 -138515470 + MLT1A1 LTR MaLR 133 365 0 391 224 51 10 chr10 7073845 7073943 -138515345 + L1MC3 LINE L1 7663 7764 -21 245 294 0 9 chr10 7073990 7074099 -138515189 - L1ME LINE L1 -2408 5400 5293 1423 197 67 54 chr10 7074321 7074692 -138514596 - MLT1B LTR MaLR 0 390 15 295 325 101 37 chr10 7076406 7076594 -138512694 - MIR SINE MIR -14 248 49 4872 227 34 12 chr10 7076603 7078193 -138511095 + L1PB1 LINE L1 4150 5794 -357 1050 53 0 0 chr10 7078193 7078326 -138510962 + (TA)n Simple_repeat Simple_repeat 2 134 0 4872 227 34 12 chr10 7078326 7078692 -138510596 + L1PB1 LINE L1 5794 6151 0 889 207 58 11 chr10 7078848 7079036 -138510252 - MER58A DNA MER1_type -15 209 13 1497 262 33 9 chr10 7080532 7081030 -138508258 - MER90 LTR ERV1 -23 591 5 1554 186 60 23 chr10 7081034 7081384 -138507904 + MER45B DNA AcHobo 678 1040 0 525 315 41 10 chr10 7082742 7082939 -138506349 - MIR SINE MIR -55 207 5 427 323 52 39 chr10 7083947 7084102 -138505186 + MIR3 SINE MIR 38 194 -14 181 250 23 0 chr10 7084227 7084271 -138505017 + MIR SINE MIR 93 137 -71 * 207 320 124 0 chr10 7084267 7084364 -138504924 - L2 LINE L2 -43 3229 3121 * 292 261 0 0 chr10 7084343 7084408 -138504880 + MIR3 SINE MIR 143 207 -1 281 296 112 20 chr10 7085211 7085363 -138503925 + MIR SINE MIR 27 192 -70 2681 121 48 10 chr10 7085407 7085819 -138503469 + MSTA LTR MaLR 1 428 0 405 123 0 0 chr10 7087501 7087566 -138501722 + (TGAA)n Simple_repeat Simple_repeat 3 67 0 266 287 40 20 chr10 7087728 7087829 -138501459 - MIR3 SINE MIR -30 178 76 1028 255 91 31 chr10 7088022 7088442 -138500846 - HsTC2 DNA Tc2 -3 1895 1275 1660 267 26 20 chr10 7088465 7088963 -138500325 - HsTC2 DNA Tc2 -1394 504 4 977 210 0 0 chr10 7089096 7089258 -138500030 - FRAM SINE Alu -3 163 2 432 272 83 30 chr10 7089299 7089468 -138499820 + MER5B DNA MER1_type 1 178 0 1363 183 31 0 chr10 7090239 7090496 -138498792 - L1MA4 LINE L1 -14 6286 6022 427 164 33 90 chr10 7090498 7090546 -138498742 + L1MA4 LINE L1 5902 5951 -349 2357 97 7 0 chr10 7090546 7090844 -138498444 + AluSx SINE Alu 2 301 -11 427 164 33 90 chr10 7090844 7090917 -138498371 + L1MA4 LINE L1 5951 6016 -284 1546 86 99 5 chr10 7091150 7091372 -138497916 - MER75B DNA T2_type 0 243 1 534 272 52 26 chr10 7091828 7092019 -138497269 + MIR SINE MIR 67 262 0 1653 128 83 4 chr10 7092618 7092883 -138496405 + AluJb SINE Alu 3 288 -24 321 118 0 0 chr10 7092958 7093009 -138496279 + (TTCC)n Simple_repeat Simple_repeat 2 52 0 4336 88 14 0 chr10 7093020 7093576 -138495712 - L1PA10 LINE L1 -4 6164 5601 280 188 0 0 chr10 7093723 7093771 -138495517 - MER75 DNA T2_type -4 510 463 821 215 48 72 chr10 7095128 7095175 -138494113 + Tigger7 DNA MER2_type 64 111 -622 2441 79 0 0 chr10 7095175 7095479 -138493809 - AluY SINE Alu -7 304 1 821 215 48 72 chr10 7095479 7095640 -138493648 + Tigger7 DNA MER2_type 111 267 -466 487 209 0 0 chr10 7095637 7095728 -138493560 + Tigger7 DNA MER2_type 2392 2482 -9 * 228 67 0 0 chr10 7097301 7097331 -138491957 + (T)n Simple_repeat Simple_repeat 1 30 0 1441 126 5 5 chr10 7097364 7097570 -138491718 + AluJb SINE Alu 85 290 -22 975 85 0 48 chr10 7097574 7097763 -138491525 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1752 150 0 0 chr10 7098028 7098301 -138490987 + AluJo SINE Alu 30 302 -10 1659 182 14 27 chr10 7098691 7098988 -138490300 + AluJb SINE Alu 1 293 -19 420 349 25 28 chr10 7099603 7099887 -138489401 - L1ME3A LINE L1 -221 5949 5667 364 261 35 43 chr10 7099912 7100027 -138489261 - MER5B DNA MER1_type -5 173 60 197 293 168 24 chr10 7100116 7100283 -138489005 - L2 LINE L2 -208 3064 2874 1615 205 25 47 chr10 7100286 7100372 -138488916 - Zaphod DNA AcHobo -4 4027 3941 1563 197 10 7 chr10 7100372 7100662 -138488626 + AluJo SINE Alu 1 291 -21 1615 205 25 47 chr10 7100662 7101018 -138488270 - Zaphod DNA AcHobo -90 3941 3595 864 206 71 90 chr10 7101016 7101091 -138488197 - Zaphod DNA AcHobo -3041 990 915 * 5513 32 34 2 chr10 7101091 7101717 -138487571 + SVA Other Other 741 1386 0 864 206 71 90 chr10 7101717 7101999 -138487289 - Zaphod DNA AcHobo -3116 915 642 2472 187 36 46 chr10 7101999 7102395 -138486893 - MER74A LTR ERVL -2 556 166 2092 125 3 34 chr10 7102395 7102715 -138486573 + AluSg SINE Alu 1 310 0 2472 187 36 46 chr10 7102715 7102880 -138486408 - MER74A LTR ERVL -392 166 1 864 206 71 90 chr10 7102880 7102987 -138486301 - Zaphod DNA AcHobo -3389 642 534 2010 292 82 38 chr10 7103005 7104059 -138485229 + Charlie8 DNA MER1_type 166 1265 -1152 1379 247 117 93 chr10 7104123 7105149 -138484139 + Charlie8 DNA MER1_type 1367 2417 0 282 254 85 25 chr10 7105232 7105350 -138483938 - L2 LINE L2 -2 3311 3187 309 292 124 0 chr10 7106648 7106761 -138482527 + HAL1 LINE L1 4 130 -2377 243 0 0 0 chr10 7106999 7107026 -138482262 + (T)n Simple_repeat Simple_repeat 1 27 0 1787 180 42 9 chr10 7107026 7107359 -138481929 - L1MC1 LINE L1 -13 6320 5977 1979 66 4 0 chr10 7109582 7109823 -138479465 + L1PA5 LINE L1 5913 6154 0 560 267 134 31 chr10 7110377 7110786 -138478502 + MLT1H1 LTR MaLR 1 473 -117 226 324 14 0 chr10 7110836 7110907 -138478381 + L3 LINE CR1 1307 1378 -199 1685 190 10 3 chr10 7110948 7111258 -138478030 + AluJo SINE Alu 1 312 0 251 338 105 0 chr10 7111276 7111409 -138477879 + MIR SINE MIR 56 202 -60 625 250 215 12 chr10 7111795 7112135 -138477153 + LTR16A LTR ERVL 21 429 -21 469 159 45 0 chr10 7112567 7112655 -138476633 + MER112 DNA MER1_type 138 229 -31 358 309 176 0 chr10 7112780 7112945 -138476343 + MER112 DNA MER1_type 26 219 -41 4236 87 16 12 chr10 7113660 7114512 -138474776 + L1PA8 LINE L1 4767 5614 -517 1843 82 115 4 chr10 7114512 7114772 -138474516 + L1PA8 LINE L1 5874 6172 0 378 254 49 35 chr10 7117611 7117753 -138471535 - L2 LINE L2 -19 3294 3151 217 324 27 27 chr10 7117843 7117991 -138471297 - L2 LINE L2 -126 3187 3040 7955 105 12 24 chr10 7118000 7119150 -138470138 + HSMAR1 DNA Mariner 1 1136 -151 8845 103 10 22 chr10 7119250 7120503 -138468785 + HSMAR1 DNA Mariner 46 1282 -5 2077 281 63 23 chr10 7120506 7121060 -138468228 - L2 LINE L2 -286 3027 2332 1775 181 66 15 chr10 7121060 7121095 -138468193 - MLT2D LTR ERVL -2 412 380 333 0 0 0 chr10 7121095 7121132 -138468156 + (TG)n Simple_repeat Simple_repeat 2 38 0 1775 181 66 15 chr10 7121132 7121488 -138467800 - MLT2D LTR ERVL -34 380 1 2077 281 63 23 chr10 7121488 7121789 -138467499 - L2 LINE L2 -981 2332 2044 916 225 90 5 chr10 7122435 7122635 -138466653 - MER58A DNA MER1_type -6 218 2 29 0 0 0 chr10 7123621 7123650 -138465638 + AT_rich Low_complexity Low_complexity 1 29 0 426 249 109 15 chr10 7124078 7124240 -138465048 - MIR SINE MIR -51 211 32 403 307 107 19 chr10 7124855 7125060 -138464228 - MIR SINE MIR -5 257 35 282 73 0 0 chr10 7125915 7125956 -138463332 + (CA)n Simple_repeat Simple_repeat 1 41 0 741 244 25 6 chr10 7126012 7126172 -138463116 + MER63A DNA MER1_type 48 210 0 361 299 0 30 chr10 7126769 7126901 -138462387 + MIR SINE MIR 32 158 -82 658 328 20 4 chr10 7126912 7127156 -138462132 - MIR SINE MIR -13 249 2 269 350 43 17 chr10 7127715 7127832 -138461456 + MIR SINE MIR 25 144 -64 2995 259 37 37 chr10 7129069 7130249 -138459039 + L1MA9 LINE L1 42 1220 -5886 2486 160 3 0 chr10 7130249 7130612 -138458676 - THE1B LTR MaLR 0 364 1 2995 259 37 37 chr10 7130612 7131353 -138457935 + L1MA9 LINE L1 1220 1959 -5147 228 67 0 0 chr10 7131353 7131383 -138457905 + (TA)n Simple_repeat Simple_repeat 1 30 0 2995 259 37 37 chr10 7131383 7131399 -138457889 + L1MA9 LINE L1 1959 1973 -5133 2170 112 0 0 chr10 7131399 7131684 -138457604 - AluSg SINE Alu -25 285 1 2995 259 37 37 chr10 7131684 7132373 -138456915 + L1MA9 LINE L1 1973 2660 -4446 2261 114 16 0 chr10 7132373 7132681 -138456607 + AluSp SINE Alu 1 313 0 2995 259 37 37 chr10 7132681 7133556 -138455732 + L1MA9 LINE L1 2660 4135 -2971 4853 164 53 46 chr10 7133643 7134438 -138454850 + L1MA9 LINE L1 5280 6068 -1204 2411 193 39 0 chr10 7134438 7134848 -138454440 + MSTB LTR MaLR 1 426 0 4853 164 53 46 chr10 7134848 7135042 -138454246 + L1MA9 LINE L1 6068 6259 -1013 1657 109 91 69 chr10 7135042 7135352 -138453936 + AluSg SINE Alu 1 316 0 4853 164 53 46 chr10 7135352 7136134 -138453154 + L1MA9 LINE L1 6259 7063 -209 2763 136 11 33 chr10 7136136 7136459 -138452829 + L1PB3 LINE L1 5708 6020 -134 2149 119 10 3 chr10 7136459 7136769 -138452519 + AluSx SINE Alu 1 312 0 2763 136 11 33 chr10 7136769 7136900 -138452388 + L1PB3 LINE L1 6020 6152 -2 1203 154 23 14 chr10 7136919 7137133 -138452155 + L1MA9 LINE L1 7057 7272 0 763 311 10 0 chr10 7137413 7137619 -138451669 - MIR SINE MIR -32 230 23 357 281 189 0 chr10 7138754 7138918 -138450370 + MER112 DNA MER1_type 60 254 -6 2062 151 138 26 chr10 7139051 7139436 -138449852 - MSTA LTR MaLR 0 428 1 2381 126 27 33 chr10 7140165 7140531 -138448757 + THE1B LTR MaLR 1 364 0 2305 114 37 45 chr10 7141016 7141394 -138447894 - THE1C LTR MaLR 0 375 1 356 262 69 54 chr10 7141811 7141996 -138447292 + MIR SINE MIR 15 204 -4 1879 144 33 13 chr10 7142229 7142534 -138446754 + AluSx SINE Alu 1 311 -1 4456 183 11 0 chr10 7142618 7143407 -138445881 + L1MB3 LINE L1 5379 6176 -7 197 292 226 15 chr10 7144108 7144303 -138444985 - MIR SINE MIR -6 256 21 372 265 22 55 chr10 7144387 7144568 -138444720 - Charlie7 DNA MER1_type 0 2612 2438 227 286 9 29 chr10 7144544 7144649 -138444639 - Charlie7 DNA MER1_type -2502 110 8 * 2071 132 63 11 chr10 7145600 7145948 -138443340 - THE1C LTR MaLR 0 375 10 2088 254 48 36 chr10 7146633 7147465 -138441823 + L1ME3A LINE L1 5127 5973 -197 502 265 29 0 chr10 7147480 7147616 -138441672 + L1ME3A LINE L1 5913 6052 -118 441 259 52 35 chr10 7147640 7147814 -138441474 + L1ME3A LINE L1 5989 6165 -5 4772 27 2 0 chr10 7147934 7148460 -138440828 + L1PA5 LINE L1 5625 6151 -3 1765 178 27 40 chr10 7149771 7150141 -138439147 + MLT1A1 LTR MaLR 1 365 0 398 306 97 8 chr10 7150213 7150347 -138438941 - L2 LINE L2 0 3272 3127 814 319 25 0 chr10 7150437 7150675 -138438613 - MIR SINE MIR -6 256 13 204 352 0 0 chr10 7150694 7150782 -138438506 - L2 LINE L2 -193 3079 2992 466 302 83 0 chr10 7151597 7151766 -138437522 + MIR SINE MIR 28 210 -52 1129 253 68 7 chr10 7152085 7152381 -138436907 - MLT1C LTR MaLR 0 467 154 2399 173 24 18 chr10 7152390 7152847 -138436441 + MER66B LTR ERV1 27 486 0 693 134 104 0 chr10 7152847 7152981 -138436307 - MLT1C LTR MaLR -314 153 6 420 256 0 0 chr10 7153864 7154036 -138435252 + (TG)n Simple_repeat Simple_repeat 1 172 0 204 143 0 0 chr10 7154080 7154122 -138435166 + (TG)n Simple_repeat Simple_repeat 1 42 0 21 0 0 0 chr10 7154335 7154356 -138434932 + AT_rich Low_complexity Low_complexity 1 21 0 579 328 40 12 chr10 7154356 7154609 -138434679 + MIR SINE MIR 3 262 0 353 271 0 10 chr10 7154966 7155062 -138434226 + L2 LINE L2 3197 3291 -22 392 285 26 20 chr10 7155102 7155253 -138434035 - MIR SINE MIR -23 239 88 238 225 42 0 chr10 7155400 7155471 -138433817 + GA-rich Low_complexity Low_complexity 1 74 0 2287 133 38 12 chr10 7158181 7158527 -138430761 - THE1A LTR MaLR 0 355 1 2897 175 68 26 chr10 7159109 7159393 -138429895 - MER7C DNA MER2_type -2426 602 331 1876 117 9 74 chr10 7159393 7159535 -138429753 + AluJb SINE Alu 3 153 -159 2289 101 0 3 chr10 7159535 7159831 -138429457 + AluY SINE Alu 1 295 -16 1876 117 9 74 chr10 7159831 7160014 -138429274 + AluJb SINE Alu 153 307 -5 2897 175 68 26 chr10 7160014 7160307 -138428981 - MER7C DNA MER2_type -2697 331 1 2315 125 47 36 chr10 7160554 7160914 -138428374 + THE1B LTR MaLR 1 364 0 425 207 11 11 chr10 7161744 7161831 -138427457 + MER5B DNA MER1_type 5 91 -87 1098 268 96 28 chr10 7161932 7162174 -138427114 + MLT1C LTR MaLR 1 225 -242 2294 202 24 77 chr10 7162174 7162759 -138426529 - MLT2B3 LTR ERVL 0 554 1 1098 268 96 28 chr10 7162759 7162953 -138426335 + MLT1C LTR MaLR 225 467 0 226 250 215 0 chr10 7163510 7163654 -138425634 + MER112 DNA MER1_type 60 234 -26 383 211 53 44 chr10 7163676 7163790 -138425498 + L1MC5 LINE L1 7609 7723 -238 340 225 75 75 chr10 7164281 7164468 -138424820 + L1MC5 LINE L1 7717 7903 -58 180 337 112 53 chr10 7164727 7164896 -138424392 + L2 LINE L2 3088 3266 -6 2055 103 0 4 chr10 7164973 7165236 -138424052 + AluSp SINE Alu 34 295 -18 611 296 47 39 chr10 7165325 7165558 -138423730 - MIR SINE MIR -10 252 18 182 286 100 0 chr10 7165703 7165773 -138423515 - MIR SINE MIR -7 255 179 3590 174 0 17 chr10 7166413 7166474 -138422814 + L1MB3 LINE L1 5553 5614 -569 1568 220 48 20 chr10 7166474 7166829 -138422459 + MLT1A1 LTR MaLR 1 365 0 3590 174 0 17 chr10 7166829 7167374 -138421914 + L1MB3 LINE L1 5614 6150 -33 1910 100 30 50 chr10 7167374 7167675 -138421613 + AluSq SINE Alu 1 295 -18 3590 174 0 17 chr10 7167675 7167706 -138421582 + L1MB3 LINE L1 6150 6180 -3 205 200 0 0 chr10 7167710 7167750 -138421538 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 1938 129 0 11 chr10 7168148 7168428 -138420860 - AluSx SINE Alu -6 306 30 505 155 0 0 chr10 7168429 7168500 -138420788 + AluS SINE Alu 16 86 -227 300 70 0 0 chr10 7168513 7168556 -138420732 + (TTA)n Simple_repeat Simple_repeat 3 45 0 38765 30 26 1 chr10 7168556 7173977 -138415311 - L1PA2 LINE L1 -18 6137 578 828 41 0 0 chr10 7173944 7174042 -138415246 - L1PA2 LINE L1 -6048 98 1 * 221 277 78 64 chr10 7174113 7174254 -138415034 - MIR SINE MIR -72 190 48 1813 162 0 24 chr10 7175196 7175493 -138413795 + AluSx SINE Alu 1 290 -22 1923 71 0 4 chr10 7175501 7175740 -138413548 + AluY SINE Alu 46 283 -28 381 22 0 0 chr10 7175748 7175794 -138413494 + (TAAAA)n Simple_repeat Simple_repeat 5 50 0 967 110 26 39 chr10 7176040 7176157 -138413131 - Charlie3 DNA MER1_type 0 2702 2586 2135 121 0 7 chr10 7176157 7176454 -138412834 - AluSq SINE Alu -16 297 3 967 110 26 39 chr10 7176454 7176491 -138412797 - Charlie3 DNA MER1_type -116 2586 2550 343 43 0 0 chr10 7176502 7176549 -138412739 + Charlie3 DNA MER1_type 2533 2579 -131 * 2430 117 32 36 chr10 7176515 7176926 -138412362 - MER1A DNA MER1_type -120 409 1 1650 46 0 46 chr10 7176943 7177160 -138412128 + AluY SINE Alu 105 311 0 1883 172 0 16 chr10 7177941 7178255 -138411033 - AluJb SINE Alu -3 309 1 1212 134 0 0 chr10 7178608 7178787 -138410501 - AluYa5 SINE Alu 0 311 133 3058 179 39 7 chr10 7178791 7179181 -138410107 - L1MB2 LINE L1 0 6171 5756 2471 77 0 3 chr10 7179181 7179491 -138409797 - AluY SINE Alu -2 309 1 3058 179 39 7 chr10 7179491 7179670 -138409618 - L1MB2 LINE L1 -415 5756 5584 1456 257 118 47 chr10 7179946 7180864 -138408424 - L2 LINE L2 0 3313 2333 202 128 26 0 chr10 7181516 7181555 -138407733 + A-rich Low_complexity Low_complexity 2 41 0 587 327 98 42 chr10 7182294 7182481 -138406807 + L1MEc LINE L1 57 232 -6164 312 91 0 0 chr10 7182481 7182525 -138406763 + (CA)n Simple_repeat Simple_repeat 1 44 0 587 327 98 42 chr10 7182525 7183176 -138406112 + L1MEc LINE L1 232 942 -5454 * 2018 236 87 23 chr10 7183147 7184123 -138405165 + L1ME2 LINE L1 5183 6226 -7 352 22 0 0 chr10 7184770 7184816 -138404472 + MADE1 DNA Mariner 1 46 -34 321 300 44 19 chr10 7185295 7185455 -138403833 + HAL1 LINE L1 390 553 -1954 309 311 68 87 chr10 7185619 7185780 -138403508 + HAL1 LINE L1 1762 1919 -588 618 294 60 33 chr10 7185897 7186316 -138402972 + HAL1 LINE L1 1993 2422 -85 757 258 151 25 chr10 7186329 7186760 -138402528 + LTR16C LTR ERVL 6 490 -1 233 310 59 91 chr10 7188392 7188579 -138400709 + L3 LINE CR1 405 585 -992 348 285 77 68 chr10 7188619 7188826 -138400462 + MIR SINE MIR 43 251 -11 2530 60 0 13 chr10 7189080 7189395 -138399893 - AluY SINE Alu 0 311 1 1741 199 21 8 chr10 7189400 7189781 -138399507 - L1MB2 LINE L1 -2 6169 5784 1280 150 23 35 chr10 7189789 7190049 -138399239 + L1 LINE L1 3640 3896 -2250 1705 175 99 19 chr10 7190604 7191027 -138398261 + LTR48 LTR ERV1 331 787 0 35 54 0 0 chr10 7191176 7191232 -138398056 + AT_rich Low_complexity Low_complexity 1 56 0 1193 150 84 14 chr10 7191772 7191985 -138397303 + MER30 DNA MER1_type 1 228 -2 1947 129 13 30 chr10 7192221 7192524 -138396764 + AluSq SINE Alu 5 302 -11 2266 82 0 24 chr10 7192893 7193186 -138396102 + AluSc SINE Alu 1 286 -23 327 340 49 0 chr10 7194310 7194454 -138394834 + L1M4 LINE L1 2470 2620 -3526 296 311 47 16 chr10 7194522 7194779 -138394509 + L1M4 LINE L1 2681 2945 -3201 412 267 51 70 chr10 7195292 7195565 -138393723 + MER113 DNA MER1_type? 94 361 -160 215 200 50 33 chr10 7196334 7196394 -138392894 + MIR SINE MIR 120 180 -82 201 174 0 87 chr10 7196829 7196898 -138392390 + (TCTCTG)n Simple_repeat Simple_repeat 6 68 0 237 291 24 12 chr10 7196976 7197141 -138392147 + (TG)n Simple_repeat Simple_repeat 2 168 0 312 27 0 0 chr10 7197176 7197213 -138392075 + (TG)n Simple_repeat Simple_repeat 1 37 0 1905 111 7 32 chr10 7197339 7197618 -138391670 - AluSq SINE Alu -41 272 1 821 129 7 21 chr10 7197622 7197762 -138391526 + MER50 LTR ERV1 574 711 -23 609 218 60 32 chr10 7197861 7198144 -138391144 - LTR29 LTR ERV1 -89 529 221 2260 123 0 13 chr10 7198303 7198619 -138390669 + AluSx SINE Alu 1 312 0 312 238 27 96 chr10 7198648 7198745 -138390543 - L1M4 LINE L1 -778 5368 5266 1808 176 3 3 chr10 7198745 7199034 -138390254 + AluJo SINE Alu 2 290 -22 312 238 27 96 chr10 7199034 7199171 -138390117 - L1M4 LINE L1 -880 5266 5151 1328 255 88 76 chr10 7199171 7199473 -138389815 + MLT1E1 LTR MaLR 1 298 -356 1966 131 0 30 chr10 7199473 7199796 -138389492 - AluSx SINE Alu 0 312 1 1328 255 88 76 chr10 7199796 7200139 -138389149 + MLT1E1 LTR MaLR 298 654 0 312 238 27 96 chr10 7200139 7200164 -138389124 - L1M4 LINE L1 -995 5151 5126 2431 112 0 0 chr10 7200208 7200521 -138388767 + AluSq SINE Alu 1 313 0 231 241 241 9 chr10 7201028 7201144 -138388144 + MIR3 SINE MIR 66 208 0 538 194 123 32 chr10 7201599 7201754 -138387534 - MER21B LTR ERV1 -57 806 638 230 250 10 0 chr10 7201872 7201885 -138387403 + (TA)n Simple_repeat Simple_repeat 2 13 -85 1332 81 0 6 chr10 7201885 7202059 -138387229 + L1PA8 LINE L1 5991 6163 -9 230 250 10 0 chr10 7202059 7202141 -138387147 + (TA)n Simple_repeat Simple_repeat 13 98 0 804 148 42 5 chr10 7202283 7203095 -138386193 - L1MC1 LINE L1 0 6333 5188 1905 154 0 37 chr10 7203100 7203424 -138385864 - AluJb SINE Alu 0 312 1 1527 203 135 0 chr10 7203486 7203835 -138385453 - MSTD LTR MaLR 0 396 1 2406 167 55 7 chr10 7204625 7205061 -138384227 - LTR32 LTR ERVL 0 471 15 1681 94 106 196 chr10 7205119 7205589 -138383699 - MSTA LTR MaLR 0 428 1 413 213 66 115 chr10 7205638 7205821 -138383467 + MER5A DNA MER1_type 2 175 -14 810 200 7 0 chr10 7205822 7205967 -138383321 + MER5A DNA MER1_type 14 159 -30 216 0 0 0 chr10 7206358 7206382 -138382906 + (GA)n Simple_repeat Simple_repeat 2 25 0 529 333 94 19 chr10 7206854 7207217 -138382071 + L3 LINE CR1 487 876 -701 198 294 249 34 chr10 7207231 7207321 -138381967 + L3 LINE CR1 1020 1089 -488 2076 100 0 31 chr10 7207321 7207611 -138381677 + AluSx SINE Alu 18 298 -14 198 294 249 34 chr10 7207611 7207697 -138381591 + L3 LINE CR1 1089 1234 -343 438 274 137 0 chr10 7208312 7208509 -138380779 - L1MC/D LINE L1 -1997 5811 5588 2361 94 10 0 chr10 7208511 7208818 -138380470 - AluSx SINE Alu -2 310 1 1826 134 54 0 chr10 7209735 7210012 -138379276 + AluSx SINE Alu 1 292 -20 2443 107 0 0 chr10 7210015 7210325 -138378963 + AluSx SINE Alu 1 310 -2 1099 134 128 0 chr10 7210344 7210531 -138378757 + AluJo SINE Alu 84 294 -18 699 207 124 6 chr10 7210604 7210773 -138378515 + MER5A DNA MER1_type 1 189 0 193 338 119 0 chr10 7212013 7212173 -138377115 + MIR SINE MIR 31 209 -53 209 303 91 30 chr10 7212582 7212681 -138376607 - MIR3 SINE MIR -43 165 61 271 243 61 52 chr10 7212970 7213115 -138376173 - MIR SINE MIR -54 208 62 476 171 0 11 chr10 7213963 7214051 -138375237 + MIR3 SINE MIR 101 187 -21 612 255 133 49 chr10 7214341 7214825 -138374463 - L2 LINE L2 -31 3282 2759 273 284 154 38 chr10 7215011 7215170 -138374118 + MIR SINE MIR 35 206 -56 1936 163 0 22 chr10 7215755 7216074 -138373214 + AluJb SINE Alu 1 312 0 205 167 19 56 chr10 7216810 7216864 -138372424 + MER91B DNA MER1_type 4 55 -135 310 273 187 7 chr10 7218157 7218296 -138370992 - MER5A DNA MER1_type 0 189 26 372 94 0 0 chr10 7218508 7218561 -138370727 + (TG)n Simple_repeat Simple_repeat 1 53 0 194 161 0 0 chr10 7219571 7219602 -138369686 + MIR SINE MIR 67 97 -165 1004 224 5 14 chr10 7219724 7219934 -138369354 - MIR SINE MIR -34 228 21 271 306 90 9 chr10 7220107 7220218 -138369070 + MIR SINE MIR 28 147 -115 243 230 35 92 chr10 7221391 7221478 -138367810 + MIR SINE MIR 79 160 -102 355 259 123 65 chr10 7221945 7222115 -138367173 - MIR3 SINE MIR -19 189 10 207 245 20 0 chr10 7222890 7222939 -138366349 - MIR3 SINE MIR -8 200 151 516 286 239 19 chr10 7223000 7224022 -138365266 - L2 LINE L2 0 3313 2008 446 310 65 0 chr10 7224136 7224291 -138364997 - MIR SINE MIR -97 165 1 1662 180 80 50 chr10 7224997 7225374 -138363914 - MLT1B LTR MaLR -2 388 1 7379 33 0 0 chr10 7226769 7227810 -138361478 - L1P2 LINE L1 -638 5517 4476 190 259 0 52 chr10 7227855 7227913 -138361375 - L2 LINE L2 -18 3254 3200 274 243 243 37 chr10 7227935 7228071 -138361217 + MIR3 SINE MIR 12 175 -33 1230 67 11 6 chr10 7228514 7228693 -138360595 + (TTC)n Simple_repeat Simple_repeat 1 180 0 1695 185 0 51 chr10 7228696 7229010 -138360278 - AluJb SINE Alu -14 298 1 4732 120 12 15 chr10 7229280 7229631 -138359657 + HSMAR2 DNA Mariner 2 352 -950 1750 121 0 0 chr10 7229631 7229862 -138359426 + AluSg/x SINE Alu 76 306 -4 4732 120 12 15 chr10 7229862 7230722 -138358566 + HSMAR2 DNA Mariner 352 1300 -2 378 362 46 9 chr10 7231589 7231807 -138357481 + MIR SINE MIR 22 247 -15 2319 86 7 10 chr10 7232429 7232730 -138356558 - AluSq SINE Alu -13 300 1 188 270 230 14 chr10 7232829 7232903 -138356385 - MIR SINE MIR -113 149 60 2344 120 0 0 chr10 7233408 7233707 -138355581 - AluSx SINE Alu -13 299 1 940 117 0 0 chr10 7234271 7234391 -138354897 - AluSq/x SINE Alu -193 120 1 341 283 80 43 chr10 7234442 7234580 -138354708 - L1M4 LINE L1 -1260 4886 4744 192 207 259 0 chr10 7234727 7234785 -138354503 - MIR SINE MIR -90 172 100 2319 119 0 0 chr10 7235366 7235678 -138353610 + AluSx SINE Alu 1 312 0 287 307 0 62 chr10 7236291 7236483 -138352805 + CT-rich Low_complexity Low_complexity 1 180 0 355 183 39 13 chr10 7236651 7236804 -138352484 + CT-rich Low_complexity Low_complexity 2 158 0 233 211 56 11 chr10 7237210 7237300 -138351988 - L1ME3 LINE L1 -91 6071 5978 1565 197 0 36 chr10 7238892 7239201 -138350087 + AluJb SINE Alu 1 298 -14 979 69 15 0 chr10 7240354 7240485 -138348803 + L1MA3 LINE L1 6173 6305 0 2001 131 10 17 chr10 7240641 7240939 -138348349 - AluSx SINE Alu -16 296 1 339 25 0 0 chr10 7240941 7240981 -138348307 + (TTA)n Simple_repeat Simple_repeat 2 41 0 1818 103 9 125 chr10 7240981 7241302 -138347986 - AluSx SINE Alu -18 284 1 2794 150 2 28 chr10 7241443 7241584 -138347704 + L1PB3 LINE L1 5694 5837 -317 2365 73 0 45 chr10 7241584 7241897 -138347391 - AluY SINE Alu -11 300 2 2794 150 2 28 chr10 7241897 7242221 -138347067 + L1PB3 LINE L1 5837 6147 -7 204 97 0 0 chr10 7242708 7242739 -138346549 + (A)n Simple_repeat Simple_repeat 1 31 0 1747 176 3 14 chr10 7242740 7243035 -138346253 - AluJo SINE Alu -9 303 12 435 280 140 29 chr10 7243879 7244086 -138345202 + MIR SINE MIR 20 249 -13 2458 87 0 0 chr10 7244373 7244671 -138344617 - AluSx SINE Alu -14 298 1 263 103 0 0 chr10 7245239 7245278 -138344010 + L1MA9 LINE L1 6274 6312 0 26 50 0 0 chr10 7245342 7245382 -138343906 + AT_rich Low_complexity Low_complexity 1 40 0 330 282 122 20 chr10 7245715 7245960 -138343328 - L2 LINE L2 -358 2956 2687 * 621 294 50 5 chr10 7245957 7246178 -138343110 + L2 LINE L2 1879 2109 -1205 191 318 11 34 chr10 7246971 7247059 -138342229 + MIR SINE MIR 103 188 -74 192 77 0 0 chr10 7248052 7248078 -138341210 + (GAA)n Simple_repeat Simple_repeat 2 27 0 907 185 38 12 chr10 7248308 7248542 -138340746 - L1MA6 LINE L1 -6 6294 6034 1066 151 5 21 chr10 7249117 7249309 -138339979 - MER5A DNA MER1_type 0 189 1 1088 164 31 62 chr10 7249498 7249724 -138339564 + MER20 DNA MER1_type 1 219 0 207 0 0 0 chr10 7250612 7250635 -138338653 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 999 209 70 42 chr10 7250807 7251162 -138338126 - L1MC5 LINE L1 -265 7696 7332 2259 78 0 11 chr10 7251184 7251503 -138337785 - AluY SINE Alu 0 316 1 2275 104 0 41 chr10 7251503 7251820 -138337468 - AluSx SINE Alu -8 304 1 1665 202 0 22 chr10 7252643 7252838 -138336450 - AluJo SINE Alu -2 310 123 315 0 0 0 chr10 7252838 7252873 -138336415 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1665 202 0 22 chr10 7252873 7252994 -138336294 - AluJo SINE Alu -189 123 1 316 312 88 2 chr10 7253078 7253215 -138336073 - MIR3 SINE MIR -52 156 9 196 278 93 86 chr10 7253749 7253815 -138335473 - L3 LINE CR1 -352 1225 1161 2096 154 0 0 chr10 7253815 7254114 -138335174 + AluJb SINE Alu 1 299 -13 196 278 93 86 chr10 7254114 7254198 -138335090 - L3 LINE CR1 -416 1161 1074 579 228 15 95 chr10 7254304 7254567 -138334721 - L1MC5 LINE L1 -48 7913 7672 211 287 138 21 chr10 7254815 7254909 -138334379 + MIR SINE MIR 30 134 -74 2619 40 0 3 chr10 7255134 7255434 -138333854 - AluY SINE Alu -12 299 1 189 380 58 16 chr10 7255475 7255717 -138333571 + L2 LINE L2 938 1189 -2125 225 125 0 0 chr10 7255886 7255918 -138333370 + MER63 DNA MER1_type 701 732 -328 864 108 7 50 chr10 7255922 7256061 -138333227 - FLAM_C SINE Alu 0 143 11 251 237 0 0 chr10 7256088 7256147 -138333141 + MER63 DNA MER1_type 968 1026 -35 347 302 128 54 chr10 7256287 7256731 -138332557 + L2 LINE L2 1563 2039 -1275 845 88 35 0 chr10 7256898 7257012 -138332276 - AluY SINE Alu -193 118 1 318 295 269 0 chr10 7257122 7257278 -138332010 + MIR SINE MIR 65 262 0 1807 145 13 30 chr10 7257500 7257804 -138331484 + AluSq SINE Alu 1 299 -14 37268 73 7 6 chr10 7258134 7263735 -138325553 + L1P2 LINE L1 175 5779 -375 1167 49 7 14 chr10 7263735 7263877 -138325411 + AluY SINE Alu 5 145 -166 691 197 48 21 chr10 7264025 7264213 -138325075 + LTR41 LTR ERVL 1 193 -580 378 237 128 83 chr10 7264471 7264725 -138324563 + LTR41 LTR ERVL 510 795 0 425 347 12 12 chr10 7265022 7265189 -138324099 - MIR SINE MIR -93 169 3 * 442 302 116 39 chr10 7265189 7265416 -138323872 - MIR SINE MIR -16 246 2 224 26 0 79 chr10 7265623 7265661 -138323627 + (CCCTAA)n Simple_repeat Simple_repeat 6 40 0 659 96 19 0 chr10 7266778 7266882 -138322406 + (GAAA)n Simple_repeat Simple_repeat 1 106 0 238 250 0 0 chr10 7267868 7267920 -138321368 - MER81 DNA DNA 0 114 63 2192 136 72 37 chr10 7267920 7268348 -138320940 - MSTB2 LTR MaLR 0 457 15 407 147 0 0 chr10 7268349 7268417 -138320871 - MER81 DNA DNA -45 69 2 225 108 0 0 chr10 7318812 7318849 -138270439 + (CA)n Simple_repeat Simple_repeat 2 38 0 181 273 0 0 chr10 7319591 7319635 -138269653 - L2 LINE L2 -20 3293 3250 689 141 0 0 chr10 7319976 7320075 -138269213 + AluJb SINE Alu 24 122 -190 1779 141 6 69 chr10 7320082 7320402 -138268886 - AluSq SINE Alu -13 300 1 1255 132 10 10 chr10 7320402 7320599 -138268689 - MSTB LTR MaLR -229 197 1 216 0 0 0 chr10 7321058 7321082 -138268206 + (A)n Simple_repeat Simple_repeat 1 24 0 1416 116 37 0 chr10 7321412 7321627 -138267661 + L1PA11 LINE L1 5950 6172 -2 2463 142 55 0 chr10 7322408 7322810 -138266478 + MSTB1 LTR MaLR 9 432 0 4069 177 49 27 chr10 7323344 7324302 -138264986 + L1MB7 LINE L1 5197 6168 -16 1841 110 59 0 chr10 7324310 7324564 -138264724 + AluSx SINE Alu 1 269 -43 2262 98 0 14 chr10 7324763 7325059 -138264229 - AluY SINE Alu -19 292 1 569 277 51 38 chr10 7325215 7325507 -138263781 + L1MCc LINE L1 24 319 -6104 304 109 0 0 chr10 7325871 7325917 -138263371 + AluSx SINE Alu 252 297 -4 227 299 15 15 chr10 7327497 7327564 -138261724 + MIR3 SINE MIR 118 184 -24 378 212 18 0 chr10 7328031 7328196 -138261092 + (CA)n Simple_repeat Simple_repeat 2 169 0 268 211 8 8 chr10 7328210 7328333 -138260955 + (CA)n Simple_repeat Simple_repeat 1 123 0 242 226 24 0 chr10 7328403 7328571 -138260717 + (CA)n Simple_repeat Simple_repeat 2 173 0 2067 119 4 0 chr10 7329132 7329433 -138259855 + AluSx SINE Alu 5 306 0 21 0 0 0 chr10 7329826 7329847 -138259441 + AT_rich Low_complexity Low_complexity 1 21 0 255 180 180 82 chr10 7329923 7330045 -138259243 - L1ME LINE L1 -490 5631 5498 2081 119 7 7 chr10 7330460 7330755 -138258533 + AluSx SINE Alu 5 299 -13 192 40 0 0 chr10 7330910 7330935 -138258353 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 2147 104 3 3 chr10 7330944 7331232 -138258056 - AluSx SINE Alu -24 288 1 342 275 53 47 chr10 7332128 7332299 -138256989 + L3 LINE CR1 1227 1398 -179 470 263 67 52 chr10 7332339 7332368 -138256920 - MLT1J2 LTR MaLR -14 436 409 2472 98 30 11 chr10 7332368 7332736 -138256552 - THE1C LTR MaLR 0 375 1 470 263 67 52 chr10 7332736 7332900 -138256388 - MLT1J2 LTR MaLR -41 409 240 217 154 0 0 chr10 7333337 7333376 -138255912 + L3 LINE CR1 1524 1562 -15 972 149 23 0 chr10 7333807 7333981 -138255307 - L1P LINE L1 -801 5345 5168 25 51 0 0 chr10 7335357 7335396 -138253892 + AT_rich Low_complexity Low_complexity 1 39 0 300 215 52 7 chr10 7335432 7335567 -138253721 + (TA)n Simple_repeat Simple_repeat 1 141 0 1474 225 57 15 chr10 7336363 7336735 -138252553 + MLT2D LTR ERVL 1 480 -40 322 266 78 42 chr10 7336776 7336914 -138252374 + L1MC4a LINE L1 5684 5832 -1976 2058 168 31 20 chr10 7336914 7337272 -138252016 + THE1B LTR MaLR 1 362 -2 322 266 78 42 chr10 7337272 7337325 -138251963 + L1MC4a LINE L1 5832 5882 -1926 2004 105 0 4 chr10 7337766 7338042 -138251246 + L1PB2 LINE L1 5829 6103 -48 1690 175 0 20 chr10 7338043 7338335 -138250953 + AluJo SINE Alu 1 286 -26 384 132 0 0 chr10 7338358 7338426 -138250862 + L1PB3 LINE L1 6086 6153 -1 687 192 66 12 chr10 7338492 7338659 -138250629 + Cheshire DNA MER1_type 1589 1764 -656 2010 173 14 6 chr10 7338810 7339157 -138250131 - MLT1A1 LTR MaLR -13 352 3 1865 114 110 0 chr10 7339595 7339876 -138249412 + AluSx SINE Alu 1 312 0 2095 146 55 22 chr10 7340947 7341310 -138247978 + THE1C LTR MaLR 1 375 0 615 198 72 24 chr10 7341874 7342041 -138247247 + MLT1B LTR MaLR 1 175 -215 2199 101 3 3 chr10 7342046 7342332 -138246956 + AluSg SINE Alu 1 286 -24 468 356 20 7 chr10 7342465 7342788 -138246500 + AluSq SINE Alu 5 331 0 1052 173 47 135 chr10 7342801 7343119 -138246169 + MLT1C LTR MaLR 178 467 0 234 302 91 65 chr10 7343571 7343968 -138245320 + L2 LINE L2 2833 3239 -33 228 163 0 0 chr10 7344235 7344278 -138245010 + (TGAA)n Simple_repeat Simple_repeat 3 45 0 386 288 49 43 chr10 7344333 7344496 -138244792 + MIR3 SINE MIR 30 193 -15 1221 180 0 14 chr10 7345067 7345278 -138244010 + AluJo SINE Alu 5 212 -100 688 201 107 44 chr10 7345283 7345442 -138243846 + AluJo SINE Alu 109 277 -35 180 0 0 0 chr10 7345450 7345470 -138243818 + (T)n Simple_repeat Simple_repeat 1 20 0 803 183 20 20 chr10 7345843 7345996 -138243292 + FRAM SINE Alu 10 162 -14 337 311 24 36 chr10 7346014 7346181 -138243107 + MIR SINE MIR 53 217 -45 407 302 16 16 chr10 7347556 7347682 -138241606 + MIR SINE MIR 112 237 -25 2494 83 0 3 chr10 7347811 7348124 -138241164 - AluSp SINE Alu -1 312 1 537 295 93 51 chr10 7349895 7349921 -138239367 + MIR SINE MIR 2 25 -237 2192 76 29 0 chr10 7349921 7350231 -138239057 - AluSg SINE Alu 0 318 1 537 295 93 51 chr10 7350231 7350439 -138238849 + MIR SINE MIR 25 248 -14 243 317 30 20 chr10 7350818 7350919 -138238369 - MIR SINE MIR -64 198 97 2049 95 0 130 chr10 7350959 7351306 -138237982 + AluSx SINE Alu 1 302 0 441 307 50 20 chr10 7351381 7351583 -138237705 - MLT1I LTR MaLR -2 407 200 436 337 137 49 chr10 7351677 7352101 -138237187 - L2 LINE L2 -89 3183 2733 210 336 67 8 chr10 7353637 7353756 -138235532 - MIR SINE MIR -123 139 14 * 255 303 17 59 chr10 7353686 7353805 -138235483 + MIR SINE MIR 39 152 -110 206 290 29 0 chr10 7355103 7355172 -138234116 + MIR3 SINE MIR 105 175 -33 187 383 32 11 chr10 7355312 7355406 -138233882 - MIR3 SINE MIR -105 103 8 236 143 24 95 chr10 7355417 7355501 -138233787 - Charlie7 DNA MER1_type -36 2576 2499 2493 239 103 22 chr10 7355573 7356514 -138232774 - Charlie7 DNA MER1_type -94 2518 1479 287 261 185 60 chr10 7356532 7356716 -138232572 - Charlie7 DNA MER1_type -2272 340 134 791 172 16 0 chr10 7356732 7356860 -138232428 + AluJo SINE Alu 5 134 -178 13395 127 92 5 chr10 7356864 7356910 -138232378 - L1PBa LINE L1 -3175 3687 3646 1972 141 13 16 chr10 7356910 7357222 -138232066 - AluSx SINE Alu -1 311 1 13395 127 92 5 chr10 7357222 7359984 -138229304 - L1PBa LINE L1 -3216 3646 634 960 191 21 0 chr10 7359984 7360178 -138229110 - L1PBa LINE L1 -6663 200 3 1952 70 0 0 chr10 7360191 7360434 -138228854 - L1P4 LINE L1 -469 5692 5450 366 301 103 14 chr10 7362147 7362293 -138226995 - MIR3 SINE MIR -10 198 40 196 279 51 25 chr10 7362878 7362957 -138226331 - L3b LINE CR1 -249 1334 1254 1888 183 16 35 chr10 7363046 7363418 -138225870 + MLT1A1 LTR MaLR 1 365 0 244 365 77 48 chr10 7363424 7363734 -138225554 - L2 LINE L2 -15 3257 2939 3009 80 0 0 chr10 7364206 7364579 -138224709 - L1PA13 LINE L1 -2 6161 5789 318 40 0 100 chr10 7364586 7364636 -138224652 - L1PA8A LINE L1 -314 5817 5773 468 105 0 0 chr10 7365117 7365193 -138224095 + (TC)n Simple_repeat Simple_repeat 1 76 0 645 10 0 134 chr10 7366615 7366712 -138222576 + L1PA2 LINE L1 15 98 -6048 * 38273 32 24 1 chr10 7366710 7372118 -138217170 + L1PA2 LINE L1 623 6155 0 2015 144 0 0 chr10 7372893 7373192 -138216096 - AluSx SINE Alu -13 299 1 199 331 41 50 chr10 7373993 7374114 -138215174 + L2 LINE L2 3153 3272 0 2252 121 0 0 chr10 7375685 7375991 -138213297 - AluSx SINE Alu -6 306 1 625 264 19 0 chr10 7376023 7376182 -138213106 + MIR SINE MIR 50 211 -51 183 265 0 20 chr10 7376682 7376731 -138212557 + L2 LINE L2 2988 3035 -237 309 206 41 0 chr10 7377766 7377839 -138211449 + MER103 DNA DNA 2 77 -89 2690 40 0 0 chr10 7378229 7378530 -138210758 + AluY SINE Alu 1 301 -10 2032 121 28 0 chr10 7378576 7378865 -138210423 + AluSx SINE Alu 1 297 -15 242 71 0 24 chr10 7379223 7379265 -138210023 + (ATG)n Simple_repeat Simple_repeat 3 43 0 1587 206 0 3 chr10 7379289 7379576 -138209712 - AluJo SINE Alu -26 286 1 424 217 43 2 chr10 7379628 7379804 -138209484 + LTR16A1 LTR ERVL 246 457 0 2156 99 34 0 chr10 7380141 7380433 -138208855 - AluSg SINE Alu -8 302 1 339 297 78 31 chr10 7380738 7380866 -138208422 - L2 LINE L2 0 3272 3139 531 251 149 14 chr10 7381395 7381610 -138207678 + MIR SINE MIR 13 256 -6 478 266 12 73 chr10 7381584 7381832 -138207456 - L2 LINE L2 0 3313 3081 * 185 244 24 0 chr10 7381886 7381927 -138207361 + MIR SINE MIR 218 259 -3 251 329 0 0 chr10 7382793 7382869 -138206419 + MIR SINE MIR 79 154 -108 375 23 0 0 chr10 7383125 7383169 -138206119 + (TG)n Simple_repeat Simple_repeat 2 45 0 387 264 0 21 chr10 7383169 7383279 -138206009 + L1ME3A LINE L1 5760 5866 -298 754 257 105 34 chr10 7383823 7384298 -138204990 + L1M4 LINE L1 4390 4898 -1248 1356 159 42 85 chr10 7384492 7384775 -138204513 - AluJo SINE Alu -35 277 7 256 303 211 13 chr10 7385800 7385952 -138203336 - MIR SINE MIR -61 201 20 886 164 26 0 chr10 7386797 7386949 -138202339 + FRAM SINE Alu 1 155 -21 328 185 62 0 chr10 7387034 7387099 -138202189 + AluJ/FRAM SINE Alu 232 300 -2 201 365 111 8 chr10 7391528 7391654 -138197634 - MIR3 SINE MIR -53 155 17 2104 114 0 3 chr10 7391981 7392280 -138197008 + AluSx SINE Alu 1 298 -14 243 0 0 0 chr10 7392285 7392312 -138196976 + (CAAA)n Simple_repeat Simple_repeat 3 29 0 1671 166 17 7 chr10 7393266 7393568 -138195720 + AluJo SINE Alu 1 305 -7 347 73 18 0 chr10 7393908 7393963 -138195325 + (CA)n Simple_repeat Simple_repeat 2 57 0 186 43 0 0 chr10 7395227 7395250 -138194038 + (TTCTG)n Simple_repeat Simple_repeat 5 27 0 278 375 19 0 chr10 7395353 7395457 -138193831 - MIR SINE MIR -64 144 39 401 223 40 68 chr10 7395630 7395778 -138193510 - L2 LINE L2 0 3313 3170 1377 71 0 0 chr10 7397064 7397234 -138192054 + AluSq SINE Alu 126 295 -18 2047 133 0 9 chr10 7398104 7398419 -138190869 - AluSx SINE Alu 0 312 1 1829 250 54 32 chr10 7399171 7399820 -138189468 + L1MDa LINE L1 11 673 -5867 333 294 49 11 chr10 7399833 7400017 -138189271 + L1MDa LINE L1 725 915 -5625 630 242 60 64 chr10 7402025 7402350 -138186938 + MLT1B LTR MaLR 40 384 -6 258 304 43 35 chr10 7403048 7403163 -138186125 + MIR3 SINE MIR 81 196 -12 212 0 36 0 chr10 7404096 7404124 -138185164 + (TG)n Simple_repeat Simple_repeat 2 30 0 1387 213 41 46 chr10 7406573 7406740 -138182548 + MLT1B LTR MaLR 4 170 -220 1339 202 26 10 chr10 7406740 7407042 -138182246 + AluJo SINE Alu 5 311 -1 1387 213 41 46 chr10 7407042 7407263 -138182025 + MLT1B LTR MaLR 170 390 0 252 59 0 0 chr10 7408545 7408579 -138180709 + (A)n Simple_repeat Simple_repeat 1 34 0 591 258 150 41 chr10 7409187 7409277 -138180011 + LTR16A LTR ERVL 16 95 -355 1853 126 0 54 chr10 7409277 7409594 -138179694 - AluSx SINE Alu -12 300 1 591 258 150 41 chr10 7409594 7409844 -138179444 + LTR16A LTR ERVL 95 393 -57 362 239 23 0 chr10 7410001 7410089 -138179199 + L1MC4 LINE L1 6498 6587 -1455 294 167 19 0 chr10 7410111 7410165 -138179123 + MER68 LTR ERV1 5 59 -503 1766 106 0 4 chr10 7410166 7410412 -138178876 + AluSc SINE Alu 53 297 -12 548 158 24 4 chr10 7410415 7410582 -138178706 + MER46A DNA MER2_type 1 236 0 274 212 30 0 chr10 7410582 7410648 -138178640 + L1MC4 LINE L1 7842 7909 -133 1929 125 30 0 chr10 7411198 7411493 -138177795 - AluSq SINE Alu -9 304 1 3556 26 2 0 chr10 7411617 7412032 -138177256 + L1PA4 LINE L1 5737 6152 -3 2124 141 33 33 chr10 7413344 7413707 -138175581 + THE1B LTR MaLR 1 363 -1 428 171 0 11 chr10 7415543 7415631 -138173657 + (CATA)n Simple_repeat Simple_repeat 2 88 0 841 152 15 0 chr10 7415633 7415765 -138173523 - AluJo SINE Alu -177 135 2 449 259 42 36 chr10 7419950 7419961 -138169327 + L2 LINE L2 1728 1737 -1577 2253 122 39 28 chr10 7419961 7420321 -138168967 + THE1B LTR MaLR 1 364 0 449 259 42 36 chr10 7420321 7420475 -138168813 + L2 LINE L2 1737 1894 -1420 528 311 82 37 chr10 7420540 7420967 -138168321 + L2 LINE L2 2634 3305 -8 195 337 141 0 chr10 7425743 7425835 -138163453 + L2 LINE L2 3209 3313 0 671 337 36 36 chr10 7427336 7427802 -138161486 - L1ME3A LINE L1 -290 5880 5415 1225 96 0 0 chr10 7427923 7428080 -138161208 + AluSx SINE Alu 9 165 -147 277 167 0 0 chr10 7428082 7428130 -138161158 + AluSp/q SINE Alu 250 297 -6 1969 155 0 0 chr10 7428131 7428435 -138160853 - AluSx SINE Alu -8 304 1 960 194 22 0 chr10 7430354 7430534 -138158754 + MER5A DNA MER1_type 2 185 -4 321 268 107 18 chr10 7431131 7431243 -138158045 - MIR SINE MIR -66 142 21 1997 117 0 20 chr10 7432873 7433172 -138156116 - AluSx SINE Alu -19 293 1 2025 92 4 0 chr10 7433770 7434043 -138155245 + AluSq SINE Alu 24 297 -16 1266 180 22 73 chr10 7434229 7434546 -138154742 - AluJb SINE Alu -11 301 1 198 0 0 0 chr10 7435199 7435221 -138154067 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 1462 192 7 2 chr10 7436099 7436543 -138152745 + AluJo SINE Alu 1 218 -94 1089 216 13 4 chr10 7436316 7436543 -138152745 + AluJb SINE Alu 84 436 -46 660 115 25 8 chr10 7436543 7436665 -138152623 + GA-rich Low_complexity Low_complexity 1 124 0 1089 216 13 4 chr10 7436665 7436713 -138152575 + AluJb SINE Alu 436 482 0 2116 92 0 4 chr10 7437596 7437867 -138151421 + AluSq SINE Alu 39 308 -5 259 91 0 0 chr10 7438461 7438494 -138150794 + U2 snRNA snRNA 1 33 -155 776 243 75 25 chr10 7438619 7438899 -138150389 + L1MC4a LINE L1 5736 6029 -1779 195 69 0 0 chr10 7439961 7439990 -138149298 + (CAAAAA)n Simple_repeat Simple_repeat 3 31 0 510 221 131 14 chr10 7440145 7440290 -138148998 - MIR SINE MIR -72 190 29 3823 53 2 0 chr10 7441959 7442408 -138146880 + L1PA8 LINE L1 5717 6166 -6 1896 138 17 17 chr10 7444295 7444592 -138144696 + AluJb SINE Alu 1 297 -15 312 289 115 19 chr10 7445191 7445347 -138143941 - MIR SINE MIR -67 195 25 2294 148 11 0 chr10 7445393 7445744 -138143544 + THE1A LTR MaLR 1 355 0 1289 192 40 14 chr10 7446259 7446535 -138142753 + L1MB3 LINE L1 5899 6181 -2 332 250 26 0 chr10 7449881 7449957 -138139331 + L2 LINE L2 3234 3311 -2 2026 96 0 0 chr10 7450000 7450260 -138139028 - AluY SINE Alu -9 302 43 207 127 48 0 chr10 7450378 7450441 -138138847 + (TA)n Simple_repeat Simple_repeat 1 66 0 23 78 0 0 chr10 7450709 7450760 -138138528 + AT_rich Low_complexity Low_complexity 1 51 0 85 47 0 0 chr10 7450840 7450967 -138138321 + AT_rich Low_complexity Low_complexity 1 127 0 443 100 0 0 chr10 7451075 7451135 -138138153 + Alu SINE Alu 244 303 -8 232 233 29 29 chr10 7451195 7451298 -138137990 + T-rich Low_complexity Low_complexity 2 104 0 532 231 41 81 chr10 7451318 7451539 -138137749 - L1ME1 LINE L1 -20 6080 5869 935 234 65 27 chr10 7451621 7451882 -138137406 - L1ME1 LINE L1 -231 5869 5599 1136 200 5 0 chr10 7451884 7452089 -138137199 - MLT1B LTR MaLR 0 390 185 1932 123 49 7 chr10 7452219 7452503 -138136785 - AluSg SINE Alu -14 296 1 1121 146 0 0 chr10 7452507 7452678 -138136610 - MLT1B LTR MaLR -219 171 1 1451 231 33 3 chr10 7452695 7452998 -138136290 - L1ME1 LINE L1 -529 5571 5260 691 219 120 9 chr10 7453037 7453289 -138135999 - L1ME1 LINE L1 -5035 1045 772 752 233 33 11 chr10 7453293 7453473 -138135815 - MER5A DNA MER1_type -5 184 1 1999 256 40 75 chr10 7453487 7454269 -138135019 - L1ME1 LINE L1 -5307 763 10 27 0 0 0 chr10 7454269 7454296 -138134992 + AT_rich Low_complexity Low_complexity 1 27 0 607 271 21 0 chr10 7455660 7455804 -138133484 + L1ME LINE L1 351 497 -5573 733 199 283 22 chr10 7456272 7456548 -138132740 + MER7A DNA MER2_type 1 346 0 26 0 0 0 chr10 7457912 7457938 -138131350 + AT_rich Low_complexity Low_complexity 1 26 0 773 146 7 0 chr10 7458220 7458357 -138130931 + CT-rich Low_complexity Low_complexity 2 139 0 874 47 9 0 chr10 7458846 7458953 -138130335 + AluSg1 SINE Alu 1 108 -201 2178 121 7 0 chr10 7459112 7459417 -138129871 - AluSg SINE Alu -3 307 1 23 0 0 0 chr10 7459418 7459441 -138129847 + AT_rich Low_complexity Low_complexity 1 23 0 279 276 25 107 chr10 7459910 7460053 -138129235 + MIR3 SINE MIR 21 145 -63 2055 129 3 13 chr10 7460053 7460364 -138128924 + AluSg SINE Alu 3 310 0 279 276 25 107 chr10 7460364 7460416 -138128872 + MIR3 SINE MIR 145 200 -8 407 285 166 51 chr10 7461649 7462179 -138127109 + L1ME4a LINE L1 5526 6116 -5 264 368 22 22 chr10 7462523 7462705 -138126583 + L1ME LINE L1 5420 5601 -520 316 321 219 33 chr10 7464102 7464526 -138124762 + L1MEd LINE L1 64 566 -5553 376 259 17 52 chr10 7464531 7464647 -138124641 - L2 LINE L2 -3 3310 3199 589 272 173 33 chr10 7465126 7465844 -138123444 - L2 LINE L2 0 3313 2456 203 147 0 0 chr10 7467023 7467057 -138122231 + (CCA)n Simple_repeat Simple_repeat 2 35 0 288 311 11 11 chr10 7467445 7467535 -138121753 + MIR3 SINE MIR 98 187 -21 1096 281 121 43 chr10 7467561 7468281 -138121007 - L1MC4a LINE L1 -1640 6168 5393 2600 108 8 22 chr10 7468441 7468810 -138120478 + THE1B LTR MaLR 1 364 0 29 0 0 0 chr10 7469109 7469138 -138120150 + AT_rich Low_complexity Low_complexity 1 29 0 280 252 2 63 chr10 7469873 7469972 -138119316 + MIR SINE MIR 41 133 -75 188 304 82 52 chr10 7471917 7472052 -138117236 + L2 LINE L2 3133 3271 -1 363 231 45 52 chr10 7472659 7472793 -138116495 + L2 LINE L2 3094 3226 -87 358 297 27 9 chr10 7473083 7473194 -138116094 - MIR3 SINE MIR -82 126 14 21 57 0 0 chr10 7473482 7473517 -138115771 + AT_rich Low_complexity Low_complexity 1 35 0 2379 98 0 0 chr10 7473950 7474255 -138115033 + AluSg SINE Alu 1 305 -5 2288 122 0 0 chr10 7474616 7474928 -138114360 - AluSx SINE Alu 0 312 1 941 141 0 0 chr10 7475390 7475525 -138113763 - AluJo SINE Alu -177 135 1 4421 140 64 1 chr10 7477626 7478326 -138110962 - L1PA16 LINE L1 0 6166 5423 788 150 41 0 chr10 7478526 7478673 -138110615 + L1MA4 LINE L1 6145 6297 -3 2057 130 0 0 chr10 7478705 7478990 -138110298 + AluSg SINE Alu 1 285 -25 2591 235 81 33 chr10 7480264 7481031 -138108257 + MER21B LTR ERV1 9 812 -51 2292 78 0 27 chr10 7482051 7482346 -138106942 + AluSc SINE Alu 1 287 -22 907 186 136 0 chr10 7483321 7483520 -138105768 + MER46A DNA MER2_type 11 236 0 408 280 32 24 chr10 7483629 7483754 -138105534 - MIR SINE MIR -132 130 5 1682 119 4 0 chr10 7484381 7484605 -138104683 + AluSx SINE Alu 60 287 -25 303 28 0 0 chr10 7484605 7484641 -138104647 + (GGGGA)n Simple_repeat Simple_repeat 5 40 0 1682 119 4 0 chr10 7484641 7484660 -138104628 + AluSx SINE Alu 287 304 -8 1791 168 14 3 chr10 7485457 7485749 -138103539 - AluJb SINE Alu -17 295 1 772 196 61 37 chr10 7486934 7487148 -138102140 - MER20 DNA MER1_type 0 219 1 642 288 106 30 chr10 7487774 7488181 -138101107 - MLT1L LTR MaLR -32 583 146 2114 105 3 7 chr10 7490745 7491058 -138098230 - AluSx SINE Alu 0 312 1 189 107 0 0 chr10 7492444 7492472 -138096816 + (A)n Simple_repeat Simple_repeat 1 28 0 363 44 0 0 chr10 7492651 7492696 -138096592 + (TCCC)n Simple_repeat Simple_repeat 1 45 0 326 105 0 18 chr10 7492838 7492895 -138096393 + (TCCC)n Simple_repeat Simple_repeat 1 56 0 2020 125 3 0 chr10 7492895 7493182 -138096106 - AluSx SINE Alu -24 288 1 405 278 99 68 chr10 7493493 7493764 -138095524 - L2 LINE L2 -7 3306 3045 2459 94 0 0 chr10 7493764 7494071 -138095217 - AluSx SINE Alu -5 307 1 405 278 99 68 chr10 7494071 7494539 -138094749 - L2 LINE L2 -268 3045 2488 1899 203 104 38 chr10 7494539 7495066 -138094222 + MER68 LTR ERV1 1 562 0 405 278 99 68 chr10 7495066 7495120 -138094168 - L2 LINE L2 -825 2488 2437 718 153 0 0 chr10 7495125 7495236 -138094052 - AluSx SINE Alu -8 304 194 816 85 0 9 chr10 7495237 7495343 -138093945 - AluSx SINE Alu -172 141 37 2427 88 0 0 chr10 7496197 7496492 -138092796 - AluSx SINE Alu -17 295 1 447 19 0 0 chr10 7497389 7497441 -138091847 + (TG)n Simple_repeat Simple_repeat 2 53 0 21 0 0 0 chr10 7497509 7497530 -138091758 + AT_rich Low_complexity Low_complexity 1 21 0 965 255 109 26 chr10 7497677 7498100 -138091188 + MLT1C LTR MaLR 6 463 -4 2103 117 7 26 chr10 7498684 7498993 -138090295 + AluSx SINE Alu 1 303 -9 248 286 133 0 chr10 7499034 7499132 -138090156 - L2 LINE L2 -3 3310 3200 2297 114 57 20 chr10 7499336 7499687 -138089601 - THE1B LTR MaLR 0 364 1 443 308 115 40 chr10 7499875 7500248 -138089040 + HAL1 LINE L1 8 408 -2099 424 188 51 68 chr10 7500292 7500409 -138088879 + HAL1 LINE L1 580 694 -1813 2198 101 0 10 chr10 7500485 7500773 -138088515 - AluSx SINE Alu -23 289 5 316 258 22 0 chr10 7500788 7500877 -138088411 + HAL1 LINE L1 1556 1646 -861 2274 73 23 7 chr10 7501159 7501461 -138087827 - L1PA5 LINE L1 -6 6148 5842 2702 48 0 0 chr10 7501464 7501780 -138087508 + L1PA5 LINE L1 5496 5811 -343 794 161 8 0 chr10 7501886 7502016 -138087272 + AluJo SINE Alu 1 131 -171 2338 114 56 8 chr10 7502029 7502387 -138086901 + THE1C LTR MaLR 1 375 0 943 199 0 0 chr10 7502390 7502551 -138086737 + AluJo SINE Alu 137 297 -5 274 284 0 14 chr10 7503142 7503216 -138086072 + GA-rich Low_complexity Low_complexity 2 74 0 2125 130 3 0 chr10 7504215 7504507 -138084781 - AluSc SINE Alu -16 293 1 1528 104 75 90 chr10 7506515 7506794 -138082494 + AluSq SINE Alu 39 313 0 1532 196 91 6 chr10 7507623 7507964 -138081324 + MLT1A2 LTR MaLR 1 370 -4 1798 178 0 16 chr10 7508640 7508944 -138080344 + AluJb SINE Alu 1 299 -13 1340 172 17 4 chr10 7509526 7509764 -138079524 - AluJb SINE Alu -8 304 64 195 283 151 13 chr10 7510736 7510888 -138078400 + MIR SINE MIR 87 259 -3 524 200 8 0 chr10 7511083 7511208 -138078080 + (TGGA)n Simple_repeat Simple_repeat 3 128 0 185 0 40 0 chr10 7513658 7513683 -138075605 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 1637 177 55 6 chr10 7514146 7514473 -138074815 - MER2 DNA MER2_type -1 343 1 2677 33 7 0 chr10 7514759 7515060 -138074228 - AluY SINE Alu -8 303 1 1534 115 165 27 chr10 7516430 7516691 -138072597 + AluSg SINE Alu 1 297 -3 1795 149 30 33 chr10 7518235 7518536 -138070752 + AluJo SINE Alu 1 300 -12 237 326 74 0 chr10 7519747 7519842 -138069446 - HAL1 LINE L1 -2387 120 19 1784 108 115 0 chr10 7520420 7520680 -138068608 + AluSx SINE Alu 5 294 -18 939 88 64 0 chr10 7520761 7520886 -138068402 - AluSg/x SINE Alu -35 275 143 1478 113 0 0 chr10 7520886 7521080 -138068208 - AluSx SINE Alu -118 194 1 417 286 97 7 chr10 7521099 7521253 -138068035 - L2 LINE L2 -784 2530 2363 375 78 0 0 chr10 7521373 7521424 -138067864 + (TC)n Simple_repeat Simple_repeat 1 51 0 407 217 0 0 chr10 7522151 7522234 -138067054 - L2 LINE L2 -1297 2017 1935 1419 194 44 106 chr10 7524341 7524775 -138064513 + MLT2D LTR ERVL 1 407 -7 387 312 34 29 chr10 7524977 7525182 -138064106 + MIR SINE MIR 43 248 -14 207 114 0 0 chr10 7525221 7525256 -138064032 + (GGA)n Simple_repeat Simple_repeat 1 35 0 705 230 0 0 chr10 7526309 7526487 -138062801 + (TG)n Simple_repeat Simple_repeat 1 178 0 1017 121 0 7 chr10 7526610 7526750 -138062538 + AluSq/x SINE Alu 1 139 -173 305 155 0 17 chr10 7526750 7526797 -138062491 + L1P LINE L1 2667 2714 -3432 5950 65 5 100 chr10 7526797 7527998 -138061290 + L1PA8A LINE L1 5021 6129 -2 198 352 28 9 chr10 7528335 7528443 -138060845 + L2 LINE L2 3163 3272 0 246 136 0 0 chr10 7531173 7531217 -138058071 + (GA)n Simple_repeat Simple_repeat 2 45 0 2467 121 8 8 chr10 7531787 7532151 -138057137 + THE1B LTR MaLR 1 364 0 1600 184 54 32 chr10 7533922 7534238 -138055050 + MER58B DNA MER1_type 19 341 0 229 317 0 20 chr10 7534382 7534483 -138054805 + A-rich Low_complexity Low_complexity 2 100 0 1108 288 69 37 chr10 7534762 7535608 -138053680 + L1M4 LINE L1 4373 5245 -901 1246 224 16 32 chr10 7535754 7536067 -138053221 + AluJo SINE Alu 1 308 -4 279 256 44 11 chr10 7536589 7536679 -138052609 + L1M LINE L1 5318 5410 -754 1047 217 7 8 chr10 7536679 7536924 -138052364 + MLT2B1 LTR ERVL 3 241 -173 293 235 188 0 chr10 7537116 7537201 -138052087 + MLT1J2 LTR MaLR 189 289 -161 900 233 33 14 chr10 7537602 7537817 -138051471 - MER20 DNA MER1_type 0 219 1 2263 85 7 4 chr10 7538445 7538775 -138050513 + AluSq SINE Alu 1 331 0 2075 53 0 8 chr10 7539658 7539920 -138049368 + L1PA5 LINE L1 5892 6151 -3 265 163 62 0 chr10 7540838 7540918 -138048370 + (TATAA)n Simple_repeat Simple_repeat 2 86 0 1404 179 39 0 chr10 7541056 7541290 -138047998 - AluJb SINE Alu -69 243 1 216 0 0 0 chr10 7541307 7541331 -138047957 + (TTTTTG)n Simple_repeat Simple_repeat 1 24 0 801 138 8 8 chr10 7541334 7541464 -138047824 - FLAM_C SINE Alu -3 130 1 1986 132 0 0 chr10 7542307 7542580 -138046708 + AluSx SINE Alu 1 273 -39 180 152 0 0 chr10 7542581 7542614 -138046674 + GA-rich Low_complexity Low_complexity 2 34 0 1103 84 17 11 chr10 7542614 7542793 -138046495 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1383 202 70 89 chr10 7542850 7543380 -138045908 + MLT2B1 LTR ERVL 1 520 0 506 261 141 0 chr10 7543418 7543602 -138045686 + MIR SINE MIR 53 262 0 197 139 23 0 chr10 7544556 7544599 -138044689 + (CA)n Simple_repeat Simple_repeat 1 44 0 2209 101 10 0 chr10 7545043 7545340 -138043948 + AluSp SINE Alu 1 300 -13 627 195 27 34 chr10 7545920 7546069 -138043219 - MER106B DNA MER1_type -4 1055 908 238 217 0 22 chr10 7546087 7546133 -138043155 - MER106B DNA MER1_type -1014 45 1 531 332 53 4 chr10 7546529 7546755 -138042533 - L2 LINE L2 -265 3048 2812 274 139 21 35 chr10 7547323 7547467 -138041821 + HERV17 LTR ERV1 708 849 -7777 741 163 0 0 chr10 7547469 7547723 -138041565 + GA-rich Low_complexity Low_complexity 1 254 0 333 145 0 0 chr10 7547726 7547802 -138041486 + (GA)n Simple_repeat Simple_repeat 2 77 0 2555 60 0 0 chr10 7548883 7549181 -138040107 - AluY SINE Alu -12 299 2 233 216 0 54 chr10 7549581 7549655 -138039633 + L1M4 LINE L1 4577 4646 -1500 2289 135 16 16 chr10 7549723 7550087 -138039201 + THE1B LTR MaLR 1 364 0 258 32 0 0 chr10 7550288 7550319 -138038969 + (CA)n Simple_repeat Simple_repeat 2 32 0 2187 116 13 10 chr10 7550853 7551164 -138038124 + AluSx SINE Alu 1 312 0 207 69 0 0 chr10 7551564 7551593 -138037695 + (CAGAGA)n Simple_repeat Simple_repeat 2 30 0 1110 171 64 138 chr10 7552312 7552643 -138036645 - MLT1B LTR MaLR 0 390 95 2501 73 0 0 chr10 7552643 7552945 -138036343 - AluSx SINE Alu -6 306 5 1110 171 64 138 chr10 7552945 7553033 -138036255 - MLT1B LTR MaLR -295 95 2 424 267 61 28 chr10 7553213 7553393 -138035895 - MER20B DNA MER1_type -83 700 515 941 127 40 0 chr10 7553439 7553612 -138035676 + L1MB8 LINE L1 5998 6177 -1 982 289 102 11 chr10 7553691 7554131 -138035157 - MER20B DNA MER1_type -268 515 36 3010 198 84 30 chr10 7554893 7555101 -138034187 - L1ME1 LINE L1 -1 6165 5970 2157 114 0 0 chr10 7555101 7555381 -138033907 + AluSx SINE Alu 22 301 -11 3010 198 84 30 chr10 7555381 7556351 -138032937 - L1ME1 LINE L1 -196 5970 4922 180 111 0 0 chr10 7556912 7556939 -138032349 + (ATG)n Simple_repeat Simple_repeat 1 27 0 540 269 44 0 chr10 7557204 7557364 -138031924 - MLT1G LTR MaLR 0 590 424 * 965 275 50 17 chr10 7557362 7557660 -138031628 - MLT1G LTR MaLR -271 319 12 251 157 12 36 chr10 7558322 7558405 -138030883 + CT-rich Low_complexity Low_complexity 1 81 0 200 254 51 0 chr10 7559335 7559394 -138029894 - MIR3 SINE MIR -50 158 97 2044 105 0 40 chr10 7559419 7559723 -138029565 + AluSx SINE Alu 17 308 -4 2319 103 0 0 chr10 7560546 7560847 -138028441 - AluSx SINE Alu -11 301 1 243 250 0 0 chr10 7561005 7561053 -138028235 + L2 LINE L2 3219 3266 -6 1312 144 0 10 chr10 7561073 7561267 -138028021 - AluJo SINE Alu -14 298 107 570 137 11 0 chr10 7561267 7561362 -138027926 - THE1B LTR MaLR -1 363 268 236 342 7 20 chr10 7561363 7561515 -138027773 + CT-rich Low_complexity Low_complexity 3 152 0 839 259 47 0 chr10 7562766 7563002 -138026286 + L1MB3 LINE L1 5934 6180 -3 351 0 0 0 chr10 7563263 7563302 -138025986 + (CA)n Simple_repeat Simple_repeat 2 40 0 825 168 14 7 chr10 7564189 7564332 -138024956 + FRAM SINE Alu 1 144 -32 315 0 0 0 chr10 7564332 7564367 -138024921 + (CAAT)n Simple_repeat Simple_repeat 4 38 0 2322 131 80 10 chr10 7565018 7565416 -138023872 + MSTA LTR MaLR 1 426 -2 2225 154 17 51 chr10 7566004 7566419 -138022869 - Tigger2a DNA MER2_type -33 401 1 2168 110 3 0 chr10 7566638 7566956 -138022332 + AluSq SINE Alu 1 319 0 1654 130 14 11 chr10 7567808 7568084 -138021204 - Tigger2a DNA MER2_type -157 277 1 690 131 0 25 chr10 7568235 7568357 -138020931 + AluJb SINE Alu 185 303 -9 725 254 23 9 chr10 7569358 7569575 -138019713 + L1MC5 LINE L1 7706 7925 -36 2471 53 40 3 chr10 7570077 7570377 -138018911 - AluY SINE Alu 0 311 1 5196 120 8 10 chr10 7570626 7571408 -138017880 - L1PA15 LINE L1 -69 6096 5317 2304 132 25 6 chr10 7571923 7572280 -138017008 + THE1B LTR MaLR 1 364 0 2281 71 40 17 chr10 7572365 7572661 -138016627 + AluYa5 SINE Alu 1 303 -8 2281 116 0 0 chr10 7573036 7573337 -138015951 - AluSg SINE Alu -9 301 1 255 229 125 0 chr10 7573927 7574023 -138015265 - HAL1 LINE L1 -1036 1471 1364 1961 103 0 66 chr10 7574368 7574709 -138014579 + AluSx SINE Alu 1 321 0 249 219 42 135 chr10 7574727 7574919 -138014369 + MLT1J LTR MaLR 1 174 -337 2318 99 0 28 chr10 7577117 7577439 -138011849 - AluSq SINE Alu 0 313 1 439 267 35 47 chr10 7579073 7579245 -138010043 - MIR SINE MIR -40 222 53 27 0 0 0 chr10 7579550 7579577 -138009711 + AT_rich Low_complexity Low_complexity 1 27 0 1411 132 15 0 chr10 7580017 7580214 -138009074 - AluJo SINE Alu -26 286 87 2276 89 4 0 chr10 7580410 7580724 -138008564 + AluY SINE Alu 1 315 0 795 214 199 47 chr10 7581240 7581484 -138007804 - Charlie2 DNA MER1_type -3 2859 2653 2340 98 0 13 chr10 7581484 7581800 -138007488 + AluSx SINE Alu 1 312 0 795 214 199 47 chr10 7581800 7582068 -138007220 - Charlie2 DNA MER1_type -209 2653 2269 312 271 88 39 chr10 7582145 7582326 -138006962 - Charlie2 DNA MER1_type -2651 211 22 1387 203 75 11 chr10 7582362 7582737 -138006551 - Zaphod DNA AcHobo -37 3994 3596 1399 230 167 97 chr10 7582738 7583225 -138006063 - Zaphod DNA AcHobo -3043 988 537 1880 134 0 7 chr10 7583225 7583516 -138005772 + AluSg1 SINE Alu 15 303 0 1399 230 167 97 chr10 7583516 7583949 -138005339 - Zaphod DNA AcHobo -3494 537 2 2048 109 11 18 chr10 7584073 7584398 -138004890 - AluSx SINE Alu 0 323 1 1399 206 23 99 chr10 7584905 7585347 -138003941 + MLT2D LTR ERVL 7 414 0 223 288 41 0 chr10 7587666 7587739 -138001549 + MIR SINE MIR 121 196 -66 1853 166 7 3 chr10 7587866 7588167 -138001121 + AluJb SINE Alu 1 302 -10 36 53 0 0 chr10 7588627 7588684 -138000604 + AT_rich Low_complexity Low_complexity 1 57 0 24 0 0 0 chr10 7588969 7588993 -138000295 + AT_rich Low_complexity Low_complexity 1 24 0 212 259 137 58 chr10 7590679 7590730 -137998558 - MIR3 SINE MIR -14 194 148 2501 77 16 56 chr10 7590730 7591035 -137998253 + THE1B LTR MaLR 1 290 -74 2352 76 3 0 chr10 7591035 7591326 -137997962 - AluSg SINE Alu -18 292 1 2501 77 16 56 chr10 7591326 7591398 -137997890 + THE1B LTR MaLR 290 363 -1 212 259 137 58 chr10 7591398 7591485 -137997803 - MIR3 SINE MIR -60 148 45 1843 186 60 35 chr10 7593234 7593665 -137995623 + L1MB7 LINE L1 5728 6169 -15 907 184 61 10 chr10 7594446 7594642 -137994646 - MER20B DNA MER1_type 0 219 14 268 93 0 0 chr10 7594750 7594793 -137994495 - L1PA2 LINE L1 0 6155 6113 236 217 0 66 chr10 7594962 7595068 -137994220 + CT-rich Low_complexity Low_complexity 1 99 0 948 201 56 42 chr10 7595705 7595993 -137993295 - MER33 DNA MER1_type -14 310 19 650 213 31 0 chr10 7596729 7596856 -137992432 + FLAM_A SINE Alu 3 133 0 1909 141 0 24 chr10 7597549 7597847 -137991441 - AluJb SINE Alu -21 291 1 2192 129 0 10 chr10 7598796 7599107 -137990181 - AluSx SINE Alu -4 308 1 2311 91 30 0 chr10 7599601 7599898 -137989390 - AluSx SINE Alu -6 306 1 1684 169 77 66 chr10 7600685 7601112 -137988176 + MSTB1 LTR MaLR 1 432 0 2015 147 7 0 chr10 7601662 7601968 -137987320 + AluSx SINE Alu 1 308 -4 450 0 0 0 chr10 7603432 7603482 -137985806 + (CA)n Simple_repeat Simple_repeat 1 50 0 2176 86 0 40 chr10 7604119 7604421 -137984867 + AluY SINE Alu 22 311 0 2451 75 3 3 chr10 7604570 7604876 -137984412 + AluSc SINE Alu 1 306 -3 3640 113 0 52 chr10 7604984 7605540 -137983748 - MER1A DNA MER1_type 0 527 1 898 161 58 7 chr10 7605779 7605934 -137983354 - Charlie3 DNA MER1_type -2547 163 1 714 211 0 0 chr10 7606188 7606368 -137982920 + (TA)n Simple_repeat Simple_repeat 1 180 0 2158 142 7 0 chr10 7608003 7608382 -137980906 + AluSx SINE Alu 1 381 0 282 270 110 20 chr10 7608389 7608489 -137980799 + MIR3 SINE MIR 48 156 -52 1385 77 48 62 chr10 7608792 7609000 -137980288 - AluSx SINE Alu -107 205 1 1244 214 0 8 chr10 7611415 7611672 -137977616 + L1PA16 LINE L1 5894 6148 -18 1218 182 0 10 chr10 7611799 7612008 -137977280 + AluJo SINE Alu 1 207 -105 6498 156 21 22 chr10 7612110 7612430 -137976858 - L1MC1 LINE L1 -20 6313 5994 2261 129 31 11 chr10 7612430 7612787 -137976501 + THE1B LTR MaLR 1 364 0 6498 156 21 22 chr10 7612787 7613134 -137976154 - L1MC1 LINE L1 -339 5994 5648 2082 118 227 2 chr10 7613134 7613531 -137975757 - LTR19A LTR ERV1 0 486 1 6498 156 21 22 chr10 7613531 7614279 -137975009 - L1MC1 LINE L1 -685 5648 4896 2049 72 8 8 chr10 7614811 7615073 -137974215 - Charlie3 DNA MER1_type -8 2702 2441 2351 114 0 6 chr10 7615180 7615495 -137973793 + AluSp SINE Alu 1 313 0 2136 96 6 19 chr10 7616972 7617285 -137972003 + AluSc SINE Alu 1 309 0 24 32 0 0 chr10 7617506 7617537 -137971751 + AT_rich Low_complexity Low_complexity 1 31 0 24 0 0 0 chr10 7618776 7618800 -137970488 + AT_rich Low_complexity Low_complexity 1 24 0 198 294 0 29 chr10 7619647 7619715 -137969573 - L2 LINE L2 0 3272 3207 615 277 110 67 chr10 7619767 7620061 -137969227 + MLT1J LTR MaLR 1 322 -189 619 253 170 21 chr10 7620061 7620255 -137969033 + MER58A DNA MER1_type 1 223 -1 615 277 110 67 chr10 7620255 7620407 -137968881 + MLT1J LTR MaLR 322 466 -45 235 261 80 57 chr10 7621108 7621196 -137968092 + MLT1J LTR MaLR 110 199 -312 234 250 0 0 chr10 7621314 7621362 -137967926 + MLT1I LTR MaLR 346 393 -16 26 0 0 0 chr10 7621769 7621795 -137967493 + AT_rich Low_complexity Low_complexity 1 26 0 2110 108 0 56 chr10 7621889 7622213 -137967075 + AluSq SINE Alu 1 306 -7 2017 138 18 33 chr10 7622292 7622789 -137966499 - L1MB7 LINE L1 -175 6009 2806 2365 182 71 11 chr10 7623002 7623468 -137965820 + MLT1D LTR MaLR 12 505 0 550 302 104 0 chr10 7623533 7623755 -137965533 + MIR SINE MIR 12 256 -6 344 220 43 0 chr10 7624296 7624437 -137964851 + (TG)n Simple_repeat Simple_repeat 2 148 0 359 249 86 104 chr10 7624502 7624723 -137964565 + MIR SINE MIR 18 234 -28 1687 198 7 0 chr10 7626359 7626642 -137962646 + AluJb SINE Alu 1 285 -27 563 51 26 0 chr10 7626642 7626720 -137962568 + (CATA)n Simple_repeat Simple_repeat 4 83 0 235 261 80 57 chr10 7626948 7627036 -137962252 + MLT1J LTR MaLR 110 199 -312 234 250 0 0 chr10 7627154 7627202 -137962086 + MLT1I LTR MaLR 346 393 -16 2167 130 0 0 chr10 7627729 7628021 -137961267 + AluSx SINE Alu 1 292 -20 713 166 0 65 chr10 7628816 7628955 -137960333 + FLAM_A SINE Alu 1 130 -3 2491 97 0 0 chr10 7629530 7629840 -137959448 + AluSp SINE Alu 1 310 -3 2442 60 13 3 chr10 7631319 7631618 -137957670 + AluY SINE Alu 1 302 -9 1689 155 30 0 chr10 7631935 7632200 -137957088 + AluSx SINE Alu 1 273 -39 549 280 75 0 chr10 7632403 7632589 -137956699 - MIR SINE MIR -48 214 15 2069 107 7 58 chr10 7633254 7633564 -137955724 + AluSx SINE Alu 5 298 -14 499 262 35 79 chr10 7633689 7633918 -137955370 - L2 LINE L2 -3 3310 3092 405 0 0 0 chr10 7633928 7633973 -137955315 + (ATG)n Simple_repeat Simple_repeat 2 46 0 1024 150 6 12 chr10 7633973 7634140 -137955148 - AluSq SINE Alu -29 284 119 670 131 10 0 chr10 7634313 7634412 -137954876 - AluSq/x SINE Alu -208 104 5 201 245 113 0 chr10 7634432 7634485 -137954803 - L2 LINE L2 -245 3068 3010 251 300 64 18 chr10 7635423 7635533 -137953755 + MIR3 SINE MIR 81 195 -13 583 210 80 7 chr10 7635821 7635959 -137953329 + MER3 DNA MER1_type 38 185 -24 2111 119 0 0 chr10 7636558 7636836 -137952452 + AluSx SINE Alu 1 278 -34 207 69 0 0 chr10 7636838 7636867 -137952421 + (CAAT)n Simple_repeat Simple_repeat 4 32 0 2422 88 0 0 chr10 7636926 7637223 -137952065 + AluSg SINE Alu 1 297 -13 530 286 48 31 chr10 7637570 7637860 -137951428 - L1ME4a LINE L1 -237 5884 5590 2299 95 3 0 chr10 7637975 7638270 -137951018 + AluSx SINE Alu 3 298 -14 470 91 13 0 chr10 7638699 7638776 -137950512 + (TA)n Simple_repeat Simple_repeat 1 78 0 2163 112 7 3 chr10 7638777 7639071 -137950217 - AluSx SINE Alu -17 295 1 355 275 218 26 chr10 7639325 7639518 -137949770 + MLT1J LTR MaLR 1 230 -281 278 255 39 10 chr10 7639616 7639718 -137949570 + MLT1J LTR MaLR 400 504 -7 1416 110 106 9 chr10 7639742 7639969 -137949319 - AluJb SINE Alu -13 299 51 261 287 61 93 chr10 7639988 7640235 -137949053 - HAL1 LINE L1 -2 2505 2267 920 280 140 36 chr10 7640353 7640777 -137948511 - HAL1 LINE L1 -447 2060 1571 1378 147 151 8 chr10 7640777 7641036 -137948252 + AluSg1 SINE Alu 1 296 -13 920 280 140 36 chr10 7641036 7641132 -137948156 - HAL1 LINE L1 -936 1571 1486 836 216 180 41 chr10 7641149 7641566 -137947722 - HAL1 LINE L1 -1091 1416 942 435 283 72 32 chr10 7641582 7641693 -137947595 - HAL1 LINE L1 -1596 911 806 1871 109 6 45 chr10 7641693 7642004 -137947284 + AluSx SINE Alu 1 299 -13 435 283 72 32 chr10 7642004 7642143 -137947145 - HAL1 LINE L1 -1701 806 651 3059 40 0 21 chr10 7642429 7642807 -137946481 + L1PA5 LINE L1 5784 6153 -1 2345 74 3 13 chr10 7644961 7645272 -137944016 - AluSx SINE Alu -4 308 1 2266 102 0 0 chr10 7646591 7646895 -137942393 + AluSx SINE Alu 1 304 -8 1828 142 3 0 chr10 7649101 7649412 -137939876 + AluSx SINE Alu 1 312 0 371 273 163 17 chr10 7649482 7649654 -137939634 + MIR SINE MIR 48 244 -18 874 189 17 0 chr10 7649663 7649843 -137939445 + L1MA4 LINE L1 6111 6293 -7 21 0 0 0 chr10 7649857 7649878 -137939410 + AT_rich Low_complexity Low_complexity 1 21 0 314 283 76 62 chr10 7651447 7651592 -137937696 - MIR3 SINE MIR -49 159 13 202 200 0 0 chr10 7655781 7655816 -137933472 + (CA)n Simple_repeat Simple_repeat 2 36 0 200 206 0 0 chr10 7656463 7656497 -137932791 + T-rich Low_complexity Low_complexity 5 38 0 235 167 14 28 chr10 7656666 7656738 -137932550 + (CTCG)n Simple_repeat Simple_repeat 2 72 0 252 0 0 0 chr10 7656805 7656833 -137932455 + (T)n Simple_repeat Simple_repeat 1 28 0 204 125 0 0 chr10 7656840 7656872 -137932416 + (TG)n Simple_repeat Simple_repeat 1 32 0 528 264 49 0 chr10 7660601 7660745 -137928543 + MIR3 SINE MIR 28 178 -30 2124 111 0 29 chr10 7661294 7661609 -137927679 + AluSx SINE Alu 1 306 -6 1778 157 7 0 chr10 7662269 7662556 -137926732 + AluJo SINE Alu 3 291 -21 23 0 0 0 chr10 7663064 7663087 -137926201 + AT_rich Low_complexity Low_complexity 1 23 0 694 224 82 56 chr10 7663546 7663869 -137925419 - L2 LINE L2 -6 3307 2929 450 280 106 24 chr10 7664084 7664161 -137925127 - L3 LINE CR1 -11 1566 1497 2119 113 30 88 chr10 7664161 7664559 -137924729 - THE1C LTR MaLR 0 375 1 450 280 106 24 chr10 7664559 7664688 -137924600 - L3 LINE CR1 -80 1497 1343 890 292 4 25 chr10 7665149 7665392 -137923896 - MIR SINE MIR -1 261 24 509 284 47 30 chr10 7665677 7665846 -137923442 - MIR SINE MIR -28 234 63 2950 107 34 2 chr10 7665863 7666275 -137923013 + Charlie3 DNA MER1_type 87 511 -2199 * 3473 84 24 0 chr10 7666260 7666714 -137922574 + Charlie3 DNA MER1_type 2242 2706 -4 243 255 4 31 chr10 7666914 7666987 -137922301 + MIR3 SINE MIR 15 85 -132 265 279 0 0 chr10 7666992 7667053 -137922235 + CT-rich Low_complexity Low_complexity 4 64 0 875 165 6 19 chr10 7667666 7667824 -137921464 + FRAM SINE Alu 1 155 -21 311 270 114 28 chr10 7667863 7668005 -137921283 + MIR3 SINE MIR 5 161 -101 2120 123 0 0 chr10 7668005 7668306 -137920982 + AluSg SINE Alu 1 301 -9 311 270 114 28 chr10 7668306 7668374 -137920914 + MIR3 SINE MIR 161 222 -40 206 157 0 39 chr10 7668832 7668883 -137920405 + GA-rich Low_complexity Low_complexity 3 51 0 963 300 101 31 chr10 7669981 7670728 -137918560 + L2 LINE L2 2513 3311 -2 25 0 0 0 chr10 7672751 7672776 -137916512 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr10 7673142 7673171 -137916117 + AT_rich Low_complexity Low_complexity 1 29 0 673 171 0 0 chr10 7673202 7673307 -137915981 - FLAM_A SINE Alu -15 127 23 1976 92 20 33 chr10 7673322 7673628 -137915660 - AluSx SINE Alu -9 303 2 2145 128 0 0 chr10 7673654 7673966 -137915322 - AluSx SINE Alu 0 312 1 641 318 55 25 chr10 7674212 7674341 -137914947 - MIR SINE MIR -22 240 101 415 95 24 83 chr10 7674341 7674425 -137914863 + MADE1 DNA Mariner 1 79 -1 641 318 55 25 chr10 7674425 7674496 -137914792 - MIR SINE MIR -161 101 34 574 244 144 12 chr10 7675136 7675296 -137913992 + MER5A DNA MER1_type 9 189 0 194 328 8 74 chr10 7675296 7675376 -137913912 - MIR3 SINE MIR -48 160 89 2138 106 0 0 chr10 7675376 7675677 -137913611 - AluSx SINE Alu -7 305 5 194 328 8 74 chr10 7675677 7675718 -137913570 - MIR3 SINE MIR -119 89 47 2542 39 0 3 chr10 7676347 7676659 -137912629 + AluY SINE Alu 1 311 0 1762 149 7 19 chr10 7677691 7678000 -137911288 - AluJb SINE Alu -7 305 1 197 264 226 9 chr10 7678346 7678452 -137910836 - MIR SINE MIR -50 212 84 2033 95 65 3 chr10 7679834 7680128 -137909160 - AluSx SINE Alu 0 312 1 410 291 45 8 chr10 7680266 7680400 -137908888 - MIR SINE MIR -56 206 68 1940 160 0 0 chr10 7680879 7681185 -137908103 - AluSx SINE Alu -6 306 1 255 61 0 0 chr10 7681559 7681592 -137907696 + (TTTC)n Simple_repeat Simple_repeat 1 33 0 2151 111 0 0 chr10 7681894 7682191 -137907097 + AluSg SINE Alu 1 297 -13 274 238 83 0 chr10 7683190 7683274 -137906014 + MIR SINE MIR 122 212 -50 549 345 24 5 chr10 7683312 7683521 -137905767 - MIR SINE MIR -1 261 49 21 0 0 0 chr10 7683748 7683769 -137905519 + AT_rich Low_complexity Low_complexity 1 21 0 973 139 0 6 chr10 7683769 7683927 -137905361 - AluSg/x SINE Alu -23 286 130 270 0 0 0 chr10 7684801 7684831 -137904457 + (TG)n Simple_repeat Simple_repeat 2 31 0 1643 158 44 10 chr10 7685097 7685395 -137903893 - AluJb SINE Alu -4 308 1 325 250 3 0 chr10 7685425 7685506 -137903782 + AluJ/FLAM SINE Alu 1 64 -238 1503 142 64 28 chr10 7685960 7686242 -137903046 + AluJo SINE Alu 1 292 -20 418 297 97 26 chr10 7686359 7686514 -137902774 - MIR SINE MIR -77 185 20 2201 100 0 0 chr10 7686617 7686927 -137902361 + AluSx SINE Alu 3 312 0 356 211 117 16 chr10 7688704 7688832 -137900456 + Charlie1 DNA MER1_type 2621 2761 0 1447 165 0 92 chr10 7689339 7689517 -137899771 - AluJo SINE Alu -10 302 166 2078 117 7 0 chr10 7689517 7689817 -137899471 - AluSp SINE Alu -11 302 1 1447 165 0 92 chr10 7689817 7689965 -137899323 - AluJo SINE Alu -146 166 6 26 0 0 0 chr10 7689996 7690022 -137899266 + AT_rich Low_complexity Low_complexity 1 26 0 237 196 0 98 chr10 7690034 7690146 -137899142 - Charlie7 DNA MER1_type -61 2551 2451 1748 167 7 24 chr10 7691922 7692215 -137897073 - AluJb SINE Alu -21 291 4 797 298 82 70 chr10 7692376 7692960 -137896328 - L1MC4a LINE L1 -1907 5901 5311 1800 143 68 0 chr10 7693083 7693376 -137895912 - AluSx SINE Alu 0 311 1 215 79 26 0 chr10 7693385 7693423 -137895865 + (TA)n Simple_repeat Simple_repeat 2 40 0 285 266 87 49 chr10 7693598 7693782 -137895506 + L1MCc LINE L1 14 204 -6219 890 139 0 8 chr10 7694197 7694326 -137894962 - AluJb SINE Alu -21 291 164 618 251 22 27 chr10 7694550 7695125 -137894163 + L1MCc LINE L1 1263 2146 -4795 1435 224 11 0 chr10 7695127 7695391 -137893897 + Tigger7 DNA MER2_type 1 267 -466 688 136 0 19 chr10 7695392 7695495 -137893793 + Tigger7 DNA MER2_type 2387 2487 0 2152 140 7 0 chr10 7696446 7696753 -137892535 - AluSx SINE Alu -3 309 1 577 259 57 57 chr10 7697026 7697219 -137892069 - MLT1L LTR MaLR -399 216 24 2185 86 7 30 chr10 7697564 7697866 -137891422 + AluSp SINE Alu 19 313 0 1854 141 48 7 chr10 7698407 7698698 -137890590 - AluSx SINE Alu -9 303 1 189 382 24 18 chr10 7698880 7699045 -137890243 + L2 LINE L2 2919 3084 -188 276 338 0 0 chr10 7699057 7699137 -137890151 + MIR SINE MIR 12 91 -171 1012 246 45 34 chr10 7699137 7699450 -137889838 - LTR40b LTR ERVL 0 462 154 3895 122 27 42 chr10 7699450 7700115 -137889173 + L1PA13 LINE L1 5509 6163 0 2027 188 5 5 chr10 7700115 7700499 -137888789 + L1PB4 LINE L1 5769 6152 -4 1012 246 45 34 chr10 7700499 7700612 -137888676 - LTR40b LTR ERVL -307 155 73 396 278 0 0 chr10 7700675 7700783 -137888505 + MIR SINE MIR 89 196 -66 649 135 8 71 chr10 7700894 7701020 -137888268 - FLAM_C SINE Alu -15 118 1 388 287 70 0 chr10 7701343 7701472 -137887816 + MIR SINE MIR 94 231 -31 24 32 0 0 chr10 7702557 7702588 -137886700 + AT_rich Low_complexity Low_complexity 1 31 0 2304 97 7 0 chr10 7702815 7703123 -137886165 - AluY SINE Alu -1 310 1 281 188 0 88 chr10 7703527 7703582 -137885706 + MLT1J1 LTR MaLR 352 399 -47 2079 129 3 0 chr10 7703582 7703876 -137885412 - AluSx SINE Alu -17 295 1 281 188 0 88 chr10 7703876 7703900 -137885388 + MLT1J1 LTR MaLR 399 424 -22 797 284 120 12 chr10 7704154 7704495 -137884793 + LTR16C LTR ERVL 107 484 -7 301 309 55 0 chr10 7705150 7705260 -137884028 + L2 LINE L2 3198 3313 0 529 70 14 0 chr10 7706016 7706087 -137883201 - L1PA5 LINE L1 -239 5916 5845 1913 42 8 4 chr10 7706087 7706306 -137882982 + L1PA5 LINE L1 5917 6149 -5 256 24 49 0 chr10 7706306 7706347 -137882941 + (TA)n Simple_repeat Simple_repeat 1 43 0 1560 183 39 7 chr10 7706919 7707196 -137882092 + AluJo SINE Alu 1 289 -23 774 84 0 0 chr10 7707196 7707303 -137881985 + (GGGA)n Simple_repeat Simple_repeat 4 110 0 2255 108 0 3 chr10 7707692 7707989 -137881299 + AluSc SINE Alu 1 296 -13 2349 82 3 0 chr10 7708107 7708400 -137880888 - AluSq SINE Alu -19 294 1 234 366 37 8 chr10 7708735 7708869 -137880419 - L2 LINE L2 -9 3263 3126 1432 107 65 0 chr10 7708945 7709161 -137880127 + MER30 DNA MER1_type 1 230 0 238 257 81 14 chr10 7709341 7709415 -137879873 + MIR3 SINE MIR 89 167 -41 440 134 24 0 chr10 7709463 7709545 -137879743 + CT-rich Low_complexity Low_complexity 4 87 0 1220 124 295 8 chr10 7709568 7709802 -137879486 - AluSq SINE Alu -1 302 2 1678 146 13 73 chr10 7709842 7710157 -137879131 - AluJb SINE Alu -16 296 1 183 42 0 0 chr10 7710378 7710402 -137878886 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 244 354 0 0 chr10 7710770 7710883 -137878405 + GA-rich Low_complexity Low_complexity 5 117 0 3648 74 2 4 chr10 7710947 7711418 -137877870 + L1PA10 LINE L1 5691 6160 -8 186 43 0 0 chr10 7712634 7712657 -137876631 + (T)n Simple_repeat Simple_repeat 1 23 0 238 309 12 0 chr10 7712741 7712822 -137876466 - MLT1J LTR MaLR -310 201 120 512 197 33 40 chr10 7712937 7713089 -137876199 + MLT1D LTR MaLR 4 154 -351 772 204 38 6 chr10 7713158 7713347 -137875941 + MLT1D LTR MaLR 311 545 -4 244 308 0 0 chr10 7713347 7713425 -137875863 - L1ME LINE L1 -279 5891 5814 420 290 150 34 chr10 7713458 7713810 -137875478 - L1ME LINE L1 -463 5699 5378 2069 126 11 3 chr10 7714308 7714594 -137874694 + AluSx SINE Alu 5 292 -20 2095 328 38 23 chr10 7714843 7715971 -137873317 + HERV16 LTR ERVL 2262 3080 -1916 3122 232 24 51 chr10 7716054 7717470 -137871818 + L1M4 LINE L1 3813 5093 -1053 547 306 104 0 chr10 7718154 7718376 -137870912 - MIR SINE MIR -6 256 12 2388 178 71 11 chr10 7718440 7718906 -137870382 - MLT1D LTR MaLR 0 505 12 2057 133 18 33 chr10 7719119 7719616 -137869672 + L1MB7 LINE L1 2806 6009 -175 2183 92 0 62 chr10 7719695 7720020 -137869268 - AluSq SINE Alu -8 305 1 1823 112 0 0 chr10 7720442 7720691 -137868597 - AluSx SINE Alu 0 312 64 22 0 0 0 chr10 7722305 7722327 -137866961 + AT_rich Low_complexity Low_complexity 1 22 0 407 130 413 0 chr10 7722327 7722419 -137866869 + AluJo SINE Alu 7 136 -176 39 0 0 0 chr10 7722419 7722458 -137866830 + AT_rich Low_complexity Low_complexity 1 39 0 2266 110 0 3 chr10 7722587 7722887 -137866401 + AluSx SINE Alu 1 299 -13 2176 152 17 6 chr10 7723267 7723628 -137865660 + MLT1A1 LTR MaLR 1 365 0 320 296 76 63 chr10 7724015 7724552 -137864736 - L1ME LINE L1 -292 5829 5270 213 119 0 0 chr10 7724552 7724594 -137864694 + (TC)n Simple_repeat Simple_repeat 2 43 0 686 214 0 0 chr10 7724617 7724734 -137864554 - FLAM_A SINE Alu -13 129 13 2068 131 0 31 chr10 7725245 7725566 -137863722 + AluSx SINE Alu 1 311 -1 475 189 57 0 chr10 7726091 7726197 -137863091 - MIR SINE MIR -98 164 53 264 30 0 0 chr10 7727155 7727188 -137862100 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 222 241 0 19 chr10 7727564 7727618 -137861670 + GA-rich Low_complexity Low_complexity 4 56 0 2293 104 3 3 chr10 7727840 7728139 -137861149 + AluSq SINE Alu 1 299 -14 817 144 0 0 chr10 7728157 7728275 -137861013 + FLAM_C SINE Alu 4 121 -22 792 181 181 16 chr10 7728540 7728728 -137860560 + MER20 DNA MER1_type 1 219 0 205 75 75 0 chr10 7729993 7730033 -137859255 + A-rich Low_complexity Low_complexity 4 46 0 25 0 0 0 chr10 7730119 7730144 -137859144 + AT_rich Low_complexity Low_complexity 1 25 0 466 261 76 53 chr10 7731894 7732186 -137857102 + L1ME1 LINE L1 5761 6045 -117 1579 139 58 0 chr10 7732186 7732445 -137856843 - L1PB4 LINE L1 -3 6153 5880 679 159 0 0 chr10 7732445 7732552 -137856736 - U6 snRNA snRNA 0 107 1 466 261 76 53 chr10 7732552 7732651 -137856637 + L1ME1 LINE L1 6044 6162 0 24 0 0 0 chr10 7732881 7732905 -137856383 + AT_rich Low_complexity Low_complexity 1 24 0 1046 215 89 15 chr10 7732937 7733101 -137856187 - HAL1 LINE L1 -116 2391 2241 426 20 0 0 chr10 7733101 7733152 -137856136 + (CA)n Simple_repeat Simple_repeat 1 51 0 1046 215 89 15 chr10 7733152 7733312 -137855976 - HAL1 LINE L1 -266 2241 2043 257 291 27 9 chr10 7733344 7733454 -137855834 - HAL1 LINE L1 -652 1855 1744 180 176 0 0 chr10 7733967 7734001 -137855287 + (CATATA)n Simple_repeat Simple_repeat 2 35 0 290 323 155 0 chr10 7734030 7734185 -137855103 - MIR SINE MIR -82 180 2 304 217 0 0 chr10 7735192 7735252 -137854036 - MIR3 SINE MIR -16 192 133 2150 121 7 0 chr10 7736300 7736589 -137852699 + AluSx SINE Alu 3 293 -19 2007 178 84 63 chr10 7737157 7737646 -137851642 + MLT2B1 LTR ERVL 2 500 -20 189 107 0 0 chr10 7737777 7737805 -137851483 + (A)n Simple_repeat Simple_repeat 1 28 0 1016 273 104 71 chr10 7737808 7738299 -137850989 + MLT1J LTR MaLR 1 507 -4 221 336 71 0 chr10 7738969 7739082 -137850206 + L2 LINE L2 3150 3270 -2 377 293 0 10 chr10 7739988 7740087 -137849201 + L2 LINE L2 3175 3272 0 205 361 0 0 chr10 7740621 7740743 -137848545 + T-rich Low_complexity Low_complexity 1 122 0 819 158 92 30 chr10 7741400 7741564 -137847724 - MER1B DNA MER1_type -85 212 39 1750 156 7 24 chr10 7741608 7741903 -137847385 - AluJb SINE Alu -22 290 1 200 299 45 45 chr10 7742543 7742610 -137846678 - L2 LINE L2 -5 3308 3242 189 0 0 0 chr10 7742754 7742775 -137846513 + (TTCA)n Simple_repeat Simple_repeat 1 21 0 353 355 24 8 chr10 7742775 7742899 -137846389 - L2 LINE L2 -13 3259 3134 366 245 136 32 chr10 7743955 7744110 -137845178 - L1ME4a LINE L1 -57 6064 5894 1422 103 0 19 chr10 7744176 7744389 -137844899 - L1MA2 LINE L1 0 6304 6096 252 59 0 0 chr10 7745281 7745315 -137843973 + (TG)n Simple_repeat Simple_repeat 1 34 0 216 0 0 0 chr10 7745315 7745339 -137843949 + (GA)n Simple_repeat Simple_repeat 1 24 0 1624 236 6 17 chr10 7745339 7745699 -137843589 - MLT2D LTR ERVL -57 357 2 1319 175 0 0 chr10 7746481 7746704 -137842584 - AluJb SINE Alu -18 294 72 1583 171 0 0 chr10 7746713 7746971 -137842317 - AluJb SINE Alu -52 260 3 2003 108 0 34 chr10 7747463 7747786 -137841502 + AluSx SINE Alu 1 312 0 201 147 0 0 chr10 7748187 7748221 -137841067 + (TGAA)n Simple_repeat Simple_repeat 2 35 0 194 274 179 12 chr10 7748434 7748518 -137840770 - MER5B DNA MER1_type -29 149 52 416 301 127 17 chr10 7748913 7749149 -137840139 - MIR SINE MIR 0 262 1 24 67 0 0 chr10 7749700 7749745 -137839543 + AT_rich Low_complexity Low_complexity 1 45 0 1835 121 32 41 chr10 7749872 7750062 -137839226 - AluSx SINE Alu 0 312 125 387 0 0 0 chr10 7750062 7750105 -137839183 + (TG)n Simple_repeat Simple_repeat 2 44 0 1835 121 32 41 chr10 7750105 7750229 -137839059 - AluSx SINE Alu -187 125 1 2033 134 0 0 chr10 7750378 7750683 -137838605 - AluSx SINE Alu -6 306 2 1990 98 33 0 chr10 7751302 7751614 -137837674 - AluSq SINE Alu 0 321 1 200 288 0 17 chr10 7752510 7752569 -137836719 + GA-rich Low_complexity Low_complexity 3 60 0 192 77 0 0 chr10 7752570 7752596 -137836692 + (GGGA)n Simple_repeat Simple_repeat 3 28 0 807 181 7 13 chr10 7752609 7752764 -137836524 + FRAM SINE Alu 6 159 -17 2217 113 0 0 chr10 7752885 7753195 -137836093 - AluSx SINE Alu -2 310 1 1916 193 33 0 chr10 7753268 7753605 -137835683 - MER7A DNA MER2_type 0 346 1 2397 52 0 3 chr10 7753745 7754050 -137835238 + AluY SINE Alu 1 304 -7 2019 117 0 7 chr10 7754059 7754367 -137834921 + AluSc SINE Alu 1 306 -3 1874 256 59 24 chr10 7755811 7756386 -137832902 - MLT1G1 LTR MaLR 0 595 1 2074 98 0 3 chr10 7757686 7757971 -137831317 + AluSx SINE Alu 21 304 -8 2347 124 8 8 chr10 7761208 7761563 -137827725 - THE1A LTR MaLR 0 355 1 554 219 231 0 chr10 7761866 7762035 -137827253 + MIR SINE MIR 5 212 -50 442 103 19 159 chr10 7762244 7762318 -137826970 + MLT1C LTR MaLR 3 59 -408 1970 143 0 6 chr10 7762318 7762632 -137826656 - AluSx SINE Alu 0 312 1 442 103 19 159 chr10 7762632 7762664 -137826624 + MLT1C LTR MaLR 59 94 -373 1185 129 0 6 chr10 7762664 7762842 -137826446 + AluSg/x SINE Alu 120 296 -16 1431 195 96 9 chr10 7762842 7763176 -137826112 + MLT1C LTR MaLR 102 464 -3 381 313 63 24 chr10 7764412 7764831 -137824457 + MER113 DNA MER1_type? 2 471 -50 1518 107 4 36 chr10 7766666 7766896 -137822392 - L1P LINE L1 -1275 4871 4648 1255 65 24 0 chr10 7766896 7767062 -137822226 + L1PA8 LINE L1 5997 6168 -4 1518 107 4 36 chr10 7767062 7767084 -137822204 - L1P LINE L1 -1498 4648 4627 4179 135 34 1 chr10 7767815 7768469 -137820819 - L1PA15 LINE L1 -2 6163 5489 255 139 0 0 chr10 7768692 7768728 -137820560 - MER58 DNA MER1_type -2 2418 2383 1963 108 21 0 chr10 7769452 7769738 -137819550 + AluSx SINE Alu 7 298 -14 737 314 104 45 chr10 7769971 7770653 -137818635 + L1MEd LINE L1 26 747 -5372 1668 52 5 5 chr10 7770685 7770897 -137818391 + AluY SINE Alu 1 212 -99 2195 122 0 3 chr10 7771397 7771708 -137817580 - AluSx SINE Alu -2 310 1 973 213 22 0 chr10 7771801 7771984 -137817304 + MER7A DNA MER2_type 1 185 -161 243 302 32 0 chr10 7772373 7772436 -137816852 + MIR SINE MIR 70 134 -74 188 214 36 18 chr10 7772448 7772504 -137816784 + L2 LINE L2 3220 3276 -37 277 279 0 10 chr10 7773894 7773998 -137815290 + G-rich Low_complexity Low_complexity 5 107 0 292 205 121 12 chr10 7774444 7774527 -137814761 + MER3 DNA MER1_type 118 209 0 530 329 26 9 chr10 7774536 7774764 -137814524 - L1ME LINE L1 -345 5776 5545 21 36 0 0 chr10 7774838 7774866 -137814422 + AT_rich Low_complexity Low_complexity 1 28 0 432 280 72 28 chr10 7775025 7775221 -137814067 + L1M4 LINE L1 5221 5420 -748 266 280 224 32 chr10 7775511 7775636 -137813652 - MIR SINE MIR -74 188 40 279 79 0 0 chr10 7776693 7776731 -137812557 + (A)n Simple_repeat Simple_repeat 1 38 0 529 333 45 10 chr10 7777525 7777723 -137811565 - MIR SINE MIR -17 245 41 1915 133 0 10 chr10 7778197 7778499 -137810789 + AluJo SINE Alu 1 299 -13 272 203 34 0 chr10 7778888 7778947 -137810341 - MER58 DNA MER1_type -5 2415 2355 2147 100 3 3 chr10 7778947 7779248 -137810040 - AluSq SINE Alu -12 301 1 854 155 8 0 chr10 7779286 7779415 -137809873 - FLAM_C SINE Alu -3 130 1 24 67 0 0 chr10 7780311 7780356 -137808932 + AT_rich Low_complexity Low_complexity 1 45 0 1794 114 4 14 chr10 7780483 7780763 -137808525 - AluSx SINE Alu 0 312 36 206 296 151 45 chr10 7780763 7780942 -137808346 + L2 LINE L2 2068 2265 -1049 648 70 0 0 chr10 7781140 7781226 -137808062 + (TA)n Simple_repeat Simple_repeat 2 87 0 240 240 0 0 chr10 7782039 7782089 -137807199 - L2 LINE L2 0 3313 3264 2217 88 0 7 chr10 7782339 7782647 -137806641 + AluSc SINE Alu 1 306 -3 212 130 0 43 chr10 7784249 7784282 -137805006 + (TC)n Simple_repeat Simple_repeat 2 34 -11 1516 181 0 27 chr10 7784282 7784575 -137804713 - AluJb SINE Alu -27 285 1 212 130 0 43 chr10 7784575 7784587 -137804701 + (TC)n Simple_repeat Simple_repeat 34 45 0 1873 163 9 34 chr10 7785845 7786157 -137803131 + L1MB5 LINE L1 5829 6133 -41 2262 90 0 10 chr10 7786157 7786469 -137802819 + AluSg SINE Alu 1 309 -1 1873 163 9 34 chr10 7786469 7786505 -137802783 + L1MB5 LINE L1 6133 6168 -6 180 0 0 0 chr10 7786946 7786966 -137802322 + (T)n Simple_repeat Simple_repeat 1 20 0 1429 45 6 0 chr10 7786980 7787159 -137802129 - L1PA8 LINE L1 0 6172 5993 222 338 0 15 chr10 7787233 7787301 -137801987 + L2 LINE L2 3201 3267 -5 830 186 132 0 chr10 7787499 7787666 -137801622 - MER53 DNA DNA 0 189 1 1785 187 15 75 chr10 7788442 7788503 -137800785 - L1MB2 LINE L1 -7 6164 6101 2009 142 3 0 chr10 7788503 7788812 -137800476 - AluSx SINE Alu -2 310 1 1785 187 15 75 chr10 7788812 7789161 -137800127 - L1MB2 LINE L1 -70 6101 5779 281 206 0 22 chr10 7789385 7789477 -137799811 - L1MC4 LINE L1 -1339 6703 6614 1596 114 121 11 chr10 7789496 7789760 -137799528 - AluSg1 SINE Alu -16 293 1 2181 94 3 0 chr10 7789772 7790070 -137799218 - AluSp SINE Alu -14 299 1 2432 63 0 0 chr10 7790471 7790774 -137798514 - AluY SINE Alu -8 303 1 394 345 54 7 chr10 7791828 7791976 -137797312 - MIR SINE MIR -6 256 102 909 186 12 0 chr10 7793205 7793366 -137795922 - MER5A DNA MER1_type -25 164 2 294 284 94 0 chr10 7793430 7793557 -137795731 - L3 LINE CR1 -155 1422 1284 858 307 39 17 chr10 7793694 7794049 -137795239 - L1ME3 LINE L1 -5 6157 5795 2011 79 25 11 chr10 7794121 7794401 -137794887 - AluSq SINE Alu -29 284 1 1750 149 66 30 chr10 7794435 7794797 -137794491 + THE1C LTR MaLR 1 375 0 558 308 122 9 chr10 7794816 7795030 -137794258 - MIR SINE MIR -19 243 6 260 330 157 30 chr10 7795397 7795627 -137793661 - L3b LINE CR1 -76 1507 1249 1531 171 60 17 chr10 7796027 7796326 -137792962 + AluJo SINE Alu 1 312 0 858 209 78 57 chr10 7796375 7796796 -137792492 + L1MC5 LINE L1 7478 7907 -54 2036 115 3 0 chr10 7797454 7797750 -137791538 - AluSx SINE Alu -15 297 1 2150 101 3 13 chr10 7799023 7799330 -137789958 - AluSq SINE Alu -9 304 1 1534 108 31 9 chr10 7799703 7799926 -137789362 + MER30 DNA MER1_type 3 230 0 243 267 76 10 chr10 7800086 7800237 -137789051 - L1M2 LINE L1 -4304 1912 1586 360 309 18 0 chr10 7800266 7800376 -137788912 - L1MEd LINE L1 -5447 672 561 573 225 38 127 chr10 7800715 7800982 -137788306 - MIR SINE MIR 0 262 20 2131 110 3 0 chr10 7801303 7801603 -137787685 + AluSx SINE Alu 1 301 -11 239 308 105 119 chr10 7801763 7802133 -137787155 - L2 LINE L2 0 3272 2908 186 71 0 0 chr10 7802579 7802607 -137786681 + (T)n Simple_repeat Simple_repeat 1 28 0 245 339 51 8 chr10 7803618 7803736 -137785552 + L2 LINE L2 3187 3309 -4 2349 78 7 3 chr10 7803828 7804137 -137785151 + AluSx SINE Alu 1 310 -2 670 222 250 28 chr10 7804276 7804488 -137784800 + MIR SINE MIR 4 262 0 1946 141 0 3 chr10 7804799 7805104 -137784184 + AluSx SINE Alu 1 304 -8 3400 112 23 6 chr10 7805293 7805813 -137783475 - L1MA3 LINE L1 0 6305 5777 379 209 100 0 chr10 7805861 7805971 -137783317 + L1MB7 LINE L1 6064 6184 0 2067 102 7 7 chr10 7806259 7806562 -137782726 + AluSg SINE Alu 1 303 -7 1060 90 0 0 chr10 7806571 7806704 -137782584 + FLAM_C SINE Alu 1 133 0 642 200 74 0 chr10 7806764 7806899 -137782389 - L1ME3A LINE L1 -15 6155 6011 186 43 0 0 chr10 7807131 7807154 -137782134 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1301 332 0 63 chr10 7807156 7807475 -137781813 - AluSx SINE Alu -13 299 1 2165 106 3 0 chr10 7808034 7808327 -137780961 + AluSx SINE Alu 1 294 -18 330 292 96 78 chr10 7808845 7808911 -137780377 + MIR SINE MIR 25 88 -174 2217 100 3 0 chr10 7808911 7809210 -137780078 - AluSp SINE Alu -13 300 1 330 292 96 78 chr10 7809210 7809362 -137779926 + MIR SINE MIR 88 247 -15 330 301 45 85 chr10 7809751 7809997 -137779291 + L3 LINE CR1 517 752 -825 269 292 135 0 chr10 7810348 7810444 -137778844 - MIR SINE MIR -4 258 150 816 277 113 12 chr10 7810486 7810822 -137778466 - MLT1J LTR MaLR -55 456 87 453 275 19 16 chr10 7810852 7811020 -137778268 - MIR SINE MIR -13 195 30 1118 337 94 18 chr10 7811029 7811643 -137777645 + L3 LINE CR1 912 1572 -5 1637 161 17 14 chr10 7812404 7812696 -137776592 + AluJo SINE Alu 1 293 -19 399 258 25 50 chr10 7813399 7813519 -137775769 + MIR SINE MIR 73 189 -73 2400 73 0 6 chr10 7813903 7814216 -137775072 - AluY SINE Alu 0 311 1 27 0 0 0 chr10 7814274 7814301 -137774987 + AT_rich Low_complexity Low_complexity 1 27 0 817 140 26 72 chr10 7814698 7814884 -137774404 - L1MB2 LINE L1 -12 6177 5987 1839 147 6 28 chr10 7815024 7815343 -137773945 - AluJo SINE Alu 0 312 1 2218 114 0 0 chr10 7815650 7815956 -137773332 + AluSq SINE Alu 1 306 -7 1621 176 25 67 chr10 7816795 7817011 -137772277 - MER2 DNA MER2_type 0 344 147 2226 113 0 0 chr10 7817011 7817321 -137771967 + AluSx SINE Alu 1 310 -2 1621 176 25 67 chr10 7817321 7817463 -137771825 - MER2 DNA MER2_type -197 147 1 2079 113 7 0 chr10 7817807 7818109 -137771179 + AluJo SINE Alu 1 304 -8 317 322 109 12 chr10 7818697 7818907 -137770381 + MIR SINE MIR 21 251 -11 329 303 96 34 chr10 7819175 7819353 -137769935 + MIR SINE MIR 3 191 -71 2307 92 0 6 chr10 7819409 7819723 -137769565 + AluSq SINE Alu 1 312 -1 292 256 47 23 chr10 7820752 7820838 -137768450 - MIR SINE MIR -59 203 116 873 151 0 0 chr10 7820841 7820980 -137768308 - AluSg/x SINE Alu -17 295 157 2086 71 0 4 chr10 7821105 7821409 -137767879 + L1PA5 LINE L1 5871 6173 0 1523 157 33 16 chr10 7821795 7822283 -137767005 - AluJo SINE Alu 0 312 1 195 129 0 0 chr10 7822837 7822868 -137766420 + (TATG)n Simple_repeat Simple_repeat 2 32 0 322 176 0 137 chr10 7822868 7822970 -137766318 - L1MC4 LINE L1 -1339 6703 6616 210 136 34 17 chr10 7823013 7823072 -137766216 + (TATATG)n Simple_repeat Simple_repeat 6 65 0 318 192 10 144 chr10 7823076 7823180 -137766108 - L1MC4 LINE L1 -1339 6703 6614 * 325 217 33 65 chr10 7823093 7823185 -137766103 + L1MC4 LINE L1 6614 6702 -1340 310 264 23 11 chr10 7823199 7823286 -137766002 - L1MC4 LINE L1 -1340 6702 6615 224 163 0 23 chr10 7823291 7823334 -137765954 + (TATATG)n Simple_repeat Simple_repeat 1 42 0 317 297 11 22 chr10 7823334 7823425 -137765863 - L1MC4 LINE L1 -1339 6703 6614 521 189 11 28 chr10 7823431 7823611 -137765677 + (TATG)n Simple_repeat Simple_repeat 2 178 0 327 274 48 0 chr10 7823645 7823729 -137765559 + L1MC4 LINE L1 6615 6702 -1340 182 125 0 50 chr10 7823734 7823774 -137765514 + (TATATG)n Simple_repeat Simple_repeat 5 42 0 331 247 0 72 chr10 7823784 7823881 -137765407 - L1MC4 LINE L1 -1339 6703 6614 21 0 0 0 chr10 7827166 7827187 -137762101 + AT_rich Low_complexity Low_complexity 1 21 0 253 212 59 59 chr10 7827360 7827445 -137761843 - MIR SINE MIR -72 136 52 1721 190 5 42 chr10 7827985 7828143 -137761145 + MLT1A1 LTR MaLR 1 163 -202 1955 112 0 4 chr10 7828143 7828420 -137760868 + AluSc SINE Alu 1 276 -33 195 69 0 0 chr10 7828420 7828449 -137760839 + (CAAAA)n Simple_repeat Simple_repeat 1 29 0 1721 190 5 42 chr10 7828449 7828668 -137760620 + MLT1A1 LTR MaLR 161 365 0 24 32 0 0 chr10 7828832 7828863 -137760425 + AT_rich Low_complexity Low_complexity 1 31 0 1747 160 0 17 chr10 7829603 7829896 -137759392 + AluJb SINE Alu 6 293 -19 1243 174 5 0 chr10 7830112 7830336 -137758952 + AluJo SINE Alu 85 309 -3 26 0 0 0 chr10 7833170 7833196 -137756092 + AT_rich Low_complexity Low_complexity 1 26 0 23 54 0 0 chr10 7833500 7833537 -137755751 + AT_rich Low_complexity Low_complexity 1 37 0 1892 121 10 20 chr10 7834675 7834980 -137754308 - AluSx SINE Alu -10 302 1 243 61 0 0 chr10 7835701 7835734 -137753554 + (TTTA)n Simple_repeat Simple_repeat 1 33 0 2006 97 0 7 chr10 7835734 7836013 -137753275 - AluSc SINE Alu -32 277 1 941 125 0 20 chr10 7836494 7836646 -137752642 - FRAM SINE Alu -6 170 22 237 294 11 76 chr10 7837176 7837268 -137752020 - L3b LINE CR1 -100 1483 1398 375 282 215 34 chr10 7837882 7838407 -137750881 - L1M2 LINE L1 -5779 1070 451 226 124 56 34 chr10 7839445 7839534 -137749754 + (TCTCTG)n Simple_repeat Simple_repeat 4 94 0 432 271 56 124 chr10 7839679 7839782 -137749506 - L2 LINE L2 -2 3270 3162 2027 124 0 0 chr10 7839782 7840103 -137749185 + AluSc SINE Alu 3 309 0 432 271 56 124 chr10 7840103 7840442 -137748846 - L2 LINE L2 -110 3162 2858 2059 113 0 0 chr10 7840754 7841046 -137748242 + AluSc SINE Alu 1 292 -17 231 313 35 9 chr10 7841168 7841283 -137748005 + L1ME LINE L1 5614 5731 -390 1059 200 19 0 chr10 7842019 7842229 -137747059 - L1MB5 LINE L1 -323 5851 5638 278 197 28 0 chr10 7842549 7842620 -137746668 - L1MB7 LINE L1 0 6184 6112 188 179 128 0 chr10 7842625 7842664 -137746624 + L2 LINE L2 3224 3267 -5 1657 176 59 7 chr10 7842781 7843195 -137746093 - L1MB5 LINE L1 -577 5603 5164 529 235 35 35 chr10 7843517 7843687 -137745601 - MER5B DNA MER1_type -8 170 1 2068 129 0 39 chr10 7844183 7844492 -137744796 - AluSx SINE Alu -15 297 1 202 308 0 0 chr10 7844578 7844643 -137744645 - MER5B DNA MER1_type -1 177 113 922 251 26 17 chr10 7844643 7844874 -137744414 + L1MB8 LINE L1 5945 6177 -1 451 277 29 78 chr10 7845909 7846151 -137743137 + MIR SINE MIR 6 235 -27 2727 45 0 0 chr10 7846201 7846512 -137742776 + AluY SINE Alu 1 311 0 741 149 75 15 chr10 7847347 7847481 -137741807 - FLAM_C SINE Alu 0 143 2 219 310 58 11 chr10 7847503 7847590 -137741698 - L2 LINE L2 -15 3257 3167 290 282 73 29 chr10 7848939 7849116 -137740172 - L1ME LINE L1 -339 5782 5599 26 0 0 0 chr10 7849138 7849164 -137740124 + AT_rich Low_complexity Low_complexity 1 26 0 2346 65 17 0 chr10 7849165 7849457 -137739831 + AluSg SINE Alu 1 297 -13 545 258 128 16 chr10 7850713 7851135 -137738153 + HAL1 LINE L1 1304 1809 -698 499 264 103 0 chr10 7851168 7851323 -137737965 + HsTC2 DNA Tc2 4 174 -1724 2085 197 64 34 chr10 7851489 7851957 -137737331 - LTR65 LTR ERV1 -20 649 168 207 0 0 0 chr10 7852542 7852565 -137736723 + (A)n Simple_repeat Simple_repeat 1 23 0 1905 151 3 44 chr10 7852574 7852891 -137736397 + AluJo SINE Alu 1 304 -8 207 204 0 0 chr10 7853926 7853970 -137735318 + GA-rich Low_complexity Low_complexity 1 44 0 710 141 8 0 chr10 7853997 7854125 -137735163 + GA-rich Low_complexity Low_complexity 4 132 0 180 125 0 0 chr10 7854143 7854175 -137735113 + (TGAA)n Simple_repeat Simple_repeat 2 33 0 1269 183 23 108 chr10 7855308 7855718 -137733570 + MLT1A2 LTR MaLR 1 374 0 255 348 90 7 chr10 7855749 7855904 -137733384 - MIR SINE MIR -94 168 1 1994 145 10 0 chr10 7856351 7856640 -137732648 + AluSx SINE Alu 1 292 -20 515 105 0 84 chr10 7856640 7856831 -137732457 + (TA)n Simple_repeat Simple_repeat 2 176 0 413 87 43 71 chr10 7856932 7857116 -137732172 + (CATAT)n Simple_repeat Simple_repeat 2 180 0 * 690 73 0 78 chr10 7857074 7857265 -137732023 + (TA)n Simple_repeat Simple_repeat 2 177 0 888 173 52 0 chr10 7857634 7857807 -137731481 + MER5A DNA MER1_type 2 183 -6 578 205 7 66 chr10 7858784 7858981 -137730307 - MLT1G1 LTR MaLR 0 567 418 758 200 190 5 chr10 7859121 7859321 -137729967 - MLT1G1 LTR MaLR -357 238 2 311 177 0 64 chr10 7859325 7859416 -137729872 - L1P4 LINE L1 -335 5839 5753 618 120 22 11 chr10 7859524 7859616 -137729672 + MER58A DNA MER1_type 42 134 0 875 237 69 0 chr10 7859636 7859881 -137729407 + MLT1H1 LTR MaLR 294 555 0 264 179 0 0 chr10 7859881 7859919 -137729369 + Charlie8 DNA MER1_type 2378 2415 -2 2174 87 30 33 chr10 7860254 7860553 -137728735 + AluY SINE Alu 1 298 -13 525 154 34 34 chr10 7861450 7861625 -137727663 + CT-rich Low_complexity Low_complexity 3 177 0 492 62 0 0 chr10 7861789 7861853 -137727435 + (TAGA)n Simple_repeat Simple_repeat 3 66 0 185 267 0 50 chr10 7862603 7862663 -137726625 - MIR3 SINE MIR -24 184 128 2259 111 3 3 chr10 7862746 7863044 -137726244 + AluSq SINE Alu 1 298 -15 1797 224 60 47 chr10 7863393 7863594 -137725694 + MER74B LTR ERVL 56 253 -369 1892 110 3 81 chr10 7863594 7863934 -137725354 + AluSx SINE Alu 1 316 0 1797 224 60 47 chr10 7863934 7864281 -137725007 + MER74B LTR ERVL 253 612 -10 245 284 7 54 chr10 7865107 7865255 -137724033 + L1ME4a LINE L1 5258 5398 -893 345 268 92 1 chr10 7865291 7865441 -137723847 + L1ME4a LINE L1 5386 5549 -613 2153 118 0 3 chr10 7865512 7865799 -137723489 - AluSx SINE Alu -25 287 2 482 218 81 24 chr10 7866184 7866308 -137722980 + MIR SINE MIR 12 142 -120 2167 106 0 7 chr10 7866338 7866620 -137722668 + AluSq SINE Alu 1 280 -33 1887 231 67 8 chr10 7866790 7867280 -137722008 + LTR40a LTR ERVL 1 519 0 22 0 0 0 chr10 7867422 7867444 -137721844 + AT_rich Low_complexity Low_complexity 1 22 0 1805 170 0 3 chr10 7868692 7868981 -137720307 - AluJo SINE Alu -24 288 1 22 56 0 0 chr10 7868986 7869022 -137720266 + AT_rich Low_complexity Low_complexity 1 36 0 267 244 13 13 chr10 7869110 7869188 -137720100 + L1ME4a LINE L1 5531 5608 -513 2425 76 7 0 chr10 7869206 7869507 -137719781 - AluSg SINE Alu -7 303 1 2234 92 3 20 chr10 7869507 7869812 -137719476 - AluSc SINE Alu -9 300 1 502 101 0 0 chr10 7869814 7869883 -137719405 - L1ME LINE L1 -565 5601 5533 903 280 92 30 chr10 7870142 7870510 -137718778 + MLT1I LTR MaLR 17 407 -2 291 254 0 0 chr10 7870510 7870581 -137718707 + L1ME4a LINE L1 5856 5926 -195 3075 118 53 45 chr10 7870902 7871508 -137717780 - MER4B LTR ERV1 0 779 1 2099 137 0 7 chr10 7871560 7871859 -137717429 + AluSx SINE Alu 1 297 -15 28 0 0 0 chr10 7871866 7871894 -137717394 + AT_rich Low_complexity Low_complexity 1 28 0 1728 174 30 21 chr10 7873373 7873707 -137715581 + MER1B DNA MER1_type 1 337 0 1893 142 0 23 chr10 7874167 7874469 -137714819 - AluJb SINE Alu -17 295 1 2209 101 11 0 chr10 7874547 7874833 -137714455 + AluSx SINE Alu 5 293 -19 267 237 172 0 chr10 7875791 7875884 -137713404 - MIR SINE MIR -6 256 148 256 204 74 0 chr10 7875904 7875958 -137713330 + MER69 DNA AcHobo 10 67 -2459 916 179 11 16 chr10 7875966 7876150 -137713138 + MER69 DNA AcHobo 2344 2526 0 617 234 0 0 chr10 7876150 7876287 -137713001 - MIR SINE MIR -92 170 34 2094 141 0 0 chr10 7876585 7876883 -137712405 + AluSx SINE Alu 1 298 -14 308 287 193 7 chr10 7876885 7877035 -137712253 + MER5A DNA MER1_type 12 189 0 429 237 192 5 chr10 7877282 7877480 -137711808 - MIR SINE MIR -17 245 11 439 272 130 24 chr10 7877862 7878079 -137711209 - MIR SINE MIR -28 234 1 22 70 0 0 chr10 7879201 7879244 -137710044 + GC_rich Low_complexity Low_complexity 1 43 0 194 351 0 0 chr10 7881585 7881642 -137707646 - L3b LINE CR1 -8 1575 1519 290 360 40 0 chr10 7882516 7882666 -137706622 + L2 LINE L2 3116 3271 -1 1496 156 113 11 chr10 7883188 7883470 -137705818 - AluSx SINE Alu -1 311 1 639 221 16 0 chr10 7883701 7883828 -137705460 + FLAM_A SINE Alu 10 138 -4 525 183 12 37 chr10 7883828 7883992 -137705296 + GA-rich Low_complexity Low_complexity 1 160 0 234 89 0 44 chr10 7884101 7884146 -137705142 + (GGGA)n Simple_repeat Simple_repeat 2 44 0 207 147 0 59 chr10 7884144 7884212 -137705076 + (GAAA)n Simple_repeat Simple_repeat 1 64 0 * 545 299 19 38 chr10 7884498 7884709 -137704579 + L1MC4a LINE L1 5576 5782 -2026 552 227 89 35 chr10 7884966 7885169 -137704119 + L1MC4a LINE L1 5787 6000 -1808 336 48 0 0 chr10 7885367 7885409 -137703879 + (GGA)n Simple_repeat Simple_repeat 2 43 0 351 0 0 0 chr10 7885549 7885588 -137703700 + (CA)n Simple_repeat Simple_repeat 1 39 0 2067 96 7 31 chr10 7885846 7886175 -137703113 - AluSc SINE Alu 0 323 2 2425 83 3 0 chr10 7887243 7887543 -137701745 - AluY SINE Alu -10 301 1 926 203 56 107 chr10 7888161 7888615 -137700673 + MLT1A2 LTR MaLR 1 370 -4 4218 194 37 73 chr10 7888862 7889054 -137700234 + L1MD2 LINE L1 5093 5290 -1069 2285 93 0 17 chr10 7889054 7889354 -137699934 + AluSq SINE Alu 1 295 -18 4218 194 37 73 chr10 7889354 7889801 -137699487 + L1MD2 LINE L1 5290 5751 -608 1758 166 14 0 chr10 7889801 7890085 -137699203 - AluJo SINE Alu -19 293 6 4218 194 37 73 chr10 7890085 7890296 -137698992 + L1MD2 LINE L1 5751 5968 -391 2062 119 0 58 chr10 7890296 7890624 -137698664 + AluSg SINE Alu 2 310 0 4218 194 37 73 chr10 7890624 7890885 -137698403 + L1MD2 LINE L1 5968 6157 -202 339 25 0 0 chr10 7890885 7890925 -137698363 + (CA)n Simple_repeat Simple_repeat 1 40 0 4218 194 37 73 chr10 7890925 7891120 -137698168 + L1MD2 LINE L1 6157 6357 -2 1221 163 37 20 chr10 7891239 7891484 -137697804 - MLT2D LTR ERVL -165 249 1 1526 97 5 7 chr10 7891556 7891910 -137697378 - MSTA LTR MaLR 0 428 1 455 164 0 0 chr10 7892072 7892145 -137697143 + L1MB5 LINE L1 6069 6141 -33 2002 112 14 20 chr10 7892150 7892445 -137696843 + AluSx SINE Alu 3 295 -17 24 32 0 0 chr10 7892451 7892482 -137696806 + AT_rich Low_complexity Low_complexity 1 31 0 768 204 42 11 chr10 7893048 7893239 -137696049 - MIR SINE MIR 0 262 66 1364 195 101 0 chr10 7893423 7893552 -137695736 + AluJo SINE Alu 5 160 -152 730 210 65 0 chr10 7893552 7893692 -137695596 + FRAM SINE Alu 1 208 0 1158 100 0 6 chr10 7893692 7893872 -137695416 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 752 144 6 24 chr10 7893888 7894055 -137695233 + GA-rich Low_complexity Low_complexity 1 164 0 507 28 0 28 chr10 7894157 7894229 -137695059 + (GGAA)n Simple_repeat Simple_repeat 3 72 0 8684 179 41 14 chr10 7894233 7895261 -137694027 + L1PA16 LINE L1 3342 4340 -1826 237 33 0 0 chr10 7895261 7895291 -137693997 + (CA)n Simple_repeat Simple_repeat 1 30 0 8684 179 41 14 chr10 7895291 7897015 -137692273 + L1PA16 LINE L1 4340 6165 -1 1841 94 102 0 chr10 7897175 7897454 -137691834 + AluSx SINE Alu 1 305 0 331 277 34 20 chr10 7897671 7897819 -137691469 + L1MC5 LINE L1 7636 7785 -176 1633 175 11 3 chr10 7897821 7898106 -137691182 + AluJo SINE Alu 1 287 -25 29 28 0 0 chr10 7898107 7898143 -137691145 + AT_rich Low_complexity Low_complexity 1 36 0 195 358 51 12 chr10 7898240 7898418 -137690870 + L2 LINE L2 2852 3037 -276 856 244 105 4 chr10 7898692 7898930 -137690358 - MIR SINE MIR 0 262 1 1584 92 30 0 chr10 7899853 7900195 -137689093 + L1P4 LINE L1 5141 5489 -685 315 141 0 2 chr10 7900197 7900442 -137688846 + AluSx SINE Alu 1 296 -4 5780 71 0 4 chr10 7900442 7901144 -137688144 + L1PA11 LINE L1 5476 6174 0 1180 254 76 25 chr10 7901350 7901731 -137687557 + MLT1I LTR MaLR 13 409 0 1352 245 82 18 chr10 7902019 7902467 -137686821 - MER20B DNA MER1_type 0 783 307 1527 226 74 6 chr10 7902467 7902607 -137686681 + MLT1A2 LTR MaLR 1 130 -244 2178 97 0 3 chr10 7902607 7902896 -137686392 + AluY SINE Alu 23 310 -1 1527 226 74 6 chr10 7902896 7903091 -137686197 + MLT1A2 LTR MaLR 130 359 -15 680 273 59 52 chr10 7903102 7903211 -137686077 - MER20B DNA MER1_type -472 311 204 2401 111 47 39 chr10 7903211 7903572 -137685716 - THE1B LTR MaLR 0 364 1 12139 104 10 1 chr10 7903572 7905138 -137684150 - THE1B-int LTR MaLR 0 1580 1 2273 123 53 34 chr10 7905138 7905495 -137683793 - THE1B LTR MaLR 0 364 1 680 273 59 52 chr10 7905495 7905669 -137683619 - MER20B DNA MER1_type -578 205 24 3763 206 76 52 chr10 7905793 7906159 -137683129 - Tigger6a DNA MER2_type -519 1078 723 378 0 0 0 chr10 7906159 7906201 -137683087 + (TG)n Simple_repeat Simple_repeat 2 43 0 3763 206 76 52 chr10 7906201 7906883 -137682405 - Tigger6a DNA MER2_type -874 723 4 2510 78 0 0 chr10 7907065 7907371 -137681917 - AluY SINE Alu -5 306 1 2258 84 3 0 chr10 7907816 7908102 -137681186 + AluSp SINE Alu 2 288 -25 1308 154 70 40 chr10 7908123 7908395 -137680893 - AluJo SINE Alu -30 282 3 273 260 30 20 chr10 7909331 7909431 -137679857 - L2 LINE L2 -1 3312 3212 52 64 0 0 chr10 7909955 7910049 -137679239 + AT_rich Low_complexity Low_complexity 1 94 0 2097 121 0 23 chr10 7910070 7910377 -137678911 - AluSx SINE Alu -12 300 1 21 0 0 0 chr10 7910465 7910486 -137678802 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr10 7910585 7910608 -137678680 + AT_rich Low_complexity Low_complexity 1 23 0 255 295 0 26 chr10 7910803 7910881 -137678407 - L2 LINE L2 -1 3312 3237 1735 172 0 10 chr10 7911119 7911410 -137677878 - AluJb SINE Alu -24 288 1 229 148 19 37 chr10 7911585 7911639 -137677649 + C-rich Low_complexity Low_complexity 4 56 0 244 341 161 0 chr10 7912083 7912288 -137677000 - L2 LINE L2 -480 2834 2597 2410 72 7 3 chr10 7912391 7912695 -137676593 + AluSq SINE Alu 1 305 -8 2133 103 3 0 chr10 7913674 7913964 -137675324 - AluSx SINE Alu -21 291 1 1565 163 48 38 chr10 7913969 7914258 -137675030 - AluJo SINE Alu -10 292 1 488 121 0 0 chr10 7914970 7915036 -137674252 - AluS SINE Alu -246 67 2 275 149 37 0 chr10 7915554 7915661 -137673627 + (TATAA)n Simple_repeat Simple_repeat 4 114 0 479 88 67 47 chr10 7915682 7916355 -137672933 + (TATAA)n Simple_repeat Simple_repeat 1 686 0 30 45 0 0 chr10 7916365 7916409 -137672879 + AT_rich Low_complexity Low_complexity 1 44 0 258 227 57 11 chr10 7916419 7916507 -137672781 + L1MC4 LINE L1 6615 6706 -1336 268 330 27 9 chr10 7916571 7916683 -137672605 + Charlie2 DNA MER1_type 18 131 -2651 2169 216 64 82 chr10 7916797 7917493 -137671795 + Charlie2 DNA MER1_type 1869 2576 -286 1626 203 7 3 chr10 7917493 7917783 -137671505 - AluJb SINE Alu -21 291 1 2169 216 64 82 chr10 7917783 7917894 -137671394 + Charlie2 DNA MER1_type 2576 2661 -201 2334 106 3 3 chr10 7917894 7918206 -137671082 + AluSx SINE Alu 1 312 0 2169 216 64 82 chr10 7918206 7918272 -137671016 + Charlie2 DNA MER1_type 2661 2727 -135 726 155 31 54 chr10 7918372 7918501 -137670787 - AluJo SINE Alu -100 212 87 352 267 10 20 chr10 7918503 7918604 -137670684 + Charlie2 DNA MER1_type 2761 2860 -2 2062 126 3 0 chr10 7919167 7919453 -137669835 - AluJb SINE Alu -25 287 1 2065 148 32 42 chr10 7919464 7919842 -137669446 - L1MC1 LINE L1 0 6333 5960 200 284 34 45 chr10 7920064 7920152 -137669136 - MER5B DNA MER1_type -67 111 25 615 122 0 0 chr10 7920472 7920554 -137668734 + AluY SINE Alu 2 83 -228 899 247 131 0 chr10 7920573 7920840 -137668448 + L1ME3 LINE L1 5830 6131 -31 2346 84 3 3 chr10 7920840 7921148 -137668140 + AluY SINE Alu 1 308 -3 1948 123 3 0 chr10 7922115 7922399 -137666889 - AluSg SINE Alu -4 306 22 1815 112 8 0 chr10 7922649 7922899 -137666389 + AluSx SINE Alu 1 252 -60 293 141 0 4 chr10 7922947 7923000 -137666288 + Alu SINE Alu 250 290 -11 754 186 16 0 chr10 7923202 7923326 -137665962 - FLAM_C SINE Alu -16 127 2 772 316 35 23 chr10 7923982 7924324 -137664964 + L1MC4a LINE L1 5567 5912 -1896 228 244 0 0 chr10 7924357 7924402 -137664886 - L1MC4 LINE L1 -1340 6702 6658 1375 99 6 0 chr10 7924537 7924718 -137664570 - AluSg/x SINE Alu -14 296 115 233 224 0 35 chr10 7925288 7925346 -137663942 + CT-rich Low_complexity Low_complexity 2 57 0 2453 90 3 0 chr10 7925788 7926099 -137663189 + AluSp SINE Alu 1 312 -1 989 244 9 18 chr10 7926173 7926394 -137662894 - MER20 DNA MER1_type 0 219 1 550 243 97 138 chr10 7926435 7926950 -137662338 - L2 LINE L2 0 3313 2820 * 3132 288 109 6 chr10 7926940 7928226 -137661062 - L2 LINE L2 -706 2608 1191 1819 148 0 48 chr10 7929880 7930190 -137659098 - AluJb SINE Alu -12 300 6 2009 127 27 7 chr10 7930532 7930832 -137658456 + AluJb SINE Alu 2 307 -5 1659 169 3 40 chr10 7932036 7932337 -137656951 + AluJo SINE Alu 2 291 -21 1935 92 4 15 chr10 7932354 7932615 -137656673 + AluSq SINE Alu 1 258 -55 375 113 0 0 chr10 7932630 7932692 -137656596 + (TA)n Simple_repeat Simple_repeat 2 63 0 2298 114 0 13 chr10 7932960 7933276 -137656012 - AluSx SINE Alu 0 312 1 2004 136 17 0 chr10 7934071 7934365 -137654923 - AluJo SINE Alu -13 299 1 844 183 69 137 chr10 7934666 7934972 -137654316 - MLT2D LTR ERVL 0 414 130 1225 106 0 0 chr10 7934972 7935133 -137654155 - AluSg/x SINE Alu -15 295 135 779 178 0 34 chr10 7935862 7936008 -137653280 + FLAM_C SINE Alu 2 142 -1 1893 5 0 0 chr10 7936298 7936502 -137652786 + AluYb8 SINE Alu 115 318 0 4695 160 28 20 chr10 7936552 7937460 -137651828 + L1MC1 LINE L1 5188 6103 -230 195 288 50 12 chr10 7937952 7938032 -137651256 - MIR SINE MIR -12 250 168 1992 146 0 16 chr10 7938478 7938786 -137650502 + AluJo SINE Alu 1 303 -9 2321 93 3 3 chr10 7938788 7939090 -137650198 + AluSc SINE Alu 6 307 -2 923 138 0 0 chr10 7939377 7939507 -137649781 + FLAM_C SINE Alu 1 130 -3 2934 144 35 38 chr10 7939512 7939586 -137649702 + L1MB7 LINE L1 5514 5587 -597 2934 166 16 14 chr10 7939586 7940101 -137649187 + L1MB7 LINE L1 5655 6172 -12 2934 144 35 38 chr10 7940101 7940124 -137649164 + L1MB7 LINE L1 5587 6172 -12 22 0 0 0 chr10 7940577 7940599 -137648689 + AT_rich Low_complexity Low_complexity 1 22 0 473 285 149 17 chr10 7940801 7941168 -137648120 + MLT1J2 LTR MaLR 1 476 -35 509 286 119 62 chr10 7941372 7941599 -137647689 + MIR SINE MIR 8 247 -15 2196 100 7 0 chr10 7941648 7941982 -137647306 + AluSx SINE Alu 1 336 0 255 125 0 0 chr10 7942016 7942056 -137647232 + (ATG)n Simple_repeat Simple_repeat 3 42 0 2126 98 21 0 chr10 7942509 7942795 -137646493 - AluSx SINE Alu -15 297 6 393 278 70 27 chr10 7943962 7944149 -137645139 + L1ME4a LINE L1 5927 6121 0 1756 211 66 63 chr10 7944767 7944971 -137644317 + L1ME1 LINE L1 5569 5771 -395 2060 112 80 0 chr10 7944971 7945285 -137644003 + MER44D DNA MER2_type 1 609 0 1756 211 66 63 chr10 7945285 7945671 -137643617 + L1ME1 LINE L1 5771 6161 -5 1710 116 113 72 chr10 7945949 7946161 -137643127 + MER46B DNA MER2_type 1 109 -2622 2045 151 3 0 chr10 7946161 7946460 -137642828 + AluSx SINE Alu 11 310 -2 1710 116 113 72 chr10 7946460 7946593 -137642695 + MER46B DNA MER2_type 109 235 -1 2248 127 0 0 chr10 7947405 7947713 -137641575 + AluSx SINE Alu 1 308 -4 317 130 0 0 chr10 7947787 7947833 -137641455 + MADE1 DNA Mariner 1 46 -34 22 35 0 0 chr10 7948443 7948472 -137640816 + AT_rich Low_complexity Low_complexity 1 29 0 2387 93 3 3 chr10 7949308 7949610 -137639678 + AluSp SINE Alu 1 302 -11 1146 183 14 10 chr10 7949613 7949821 -137639467 + AluJo SINE Alu 6 214 -98 284 116 0 55 chr10 7949823 7949883 -137639405 + FLAM SINE Alu 82 132 -1 35 92 0 0 chr10 7949940 7950038 -137639250 + AT_rich Low_complexity Low_complexity 1 98 0 2214 114 0 3 chr10 7951171 7951468 -137637820 + AluSg SINE Alu 1 296 -14 22 0 0 0 chr10 7951565 7951587 -137637701 + AT_rich Low_complexity Low_complexity 1 22 0 193 354 40 10 chr10 7951814 7951913 -137637375 + L2 LINE L2 3148 3249 -23 2166 107 0 29 chr10 7952004 7952314 -137636974 + AluSx SINE Alu 1 301 -11 2015 147 6 16 chr10 7952667 7952981 -137636307 + AluSx SINE Alu 1 311 -1 2263 117 3 0 chr10 7953169 7953476 -137635812 + AluSx SINE Alu 5 312 0 2395 79 0 0 chr10 7954370 7954660 -137634628 - AluSx SINE Alu -22 290 1 440 318 100 35 chr10 7955205 7955516 -137633772 - L3 LINE CR1 -521 1056 726 2294 121 0 6 chr10 7956040 7956355 -137632933 + AluSq SINE Alu 1 313 0 1471 209 58 62 chr10 7957259 7957762 -137631526 + MLT1D LTR MaLR 5 505 0 1117 181 23 9 chr10 7958403 7958624 -137630664 + MER58A DNA MER1_type 1 224 0 860 121 0 50 chr10 7958969 7959109 -137630179 + FLAM_A SINE Alu 1 133 0 641 238 88 59 chr10 7959531 7959804 -137629484 + MLT1L LTR MaLR 2 282 -333 346 242 91 10 chr10 7959916 7960015 -137629273 + MLT1L LTR MaLR 500 606 -9 22 35 0 0 chr10 7960147 7960176 -137629112 + AT_rich Low_complexity Low_complexity 1 29 0 2378 90 0 10 chr10 7960376 7960677 -137628611 + AluSg SINE Alu 1 298 -12 1827 139 4 4 chr10 7960688 7960962 -137628326 + AluSx SINE Alu 1 274 -38 1735 86 0 9 chr10 7960963 7961185 -137628103 + AluSg/x SINE Alu 87 306 -6 1675 161 16 30 chr10 7961196 7961501 -137627787 + AluJo SINE Alu 1 301 -11 690 198 10 134 chr10 7961694 7961970 -137627318 + L1ME3 LINE L1 5930 6170 0 2239 92 0 23 chr10 7962044 7962347 -137626941 + AluSx SINE Alu 1 296 -16 344 227 42 8 chr10 7962347 7962457 -137626831 + L2 LINE L2 3194 3310 -3 2204 119 0 0 chr10 7962887 7963197 -137626091 + AluSg SINE Alu 1 310 0 2151 110 7 0 chr10 7963554 7963856 -137625432 + AluSx SINE Alu 1 304 0 1816 136 39 29 chr10 7963946 7964254 -137625034 - MER2 DNA MER2_type -34 311 1 2058 142 0 19 chr10 7964819 7965129 -137624159 - AluSq SINE Alu -9 304 1 206 345 35 23 chr10 7965433 7965520 -137623768 - L2 LINE L2 -35 3237 3150 1569 167 92 4 chr10 7965898 7966016 -137623272 + AluJb SINE Alu 1 107 -205 225 0 0 0 chr10 7966016 7966041 -137623247 + (CA)n Simple_repeat Simple_repeat 2 26 0 1569 167 92 4 chr10 7966041 7966203 -137623085 + AluJb SINE Alu 107 306 -6 2016 131 3 7 chr10 7966204 7966510 -137622778 + AluSq SINE Alu 2 306 -7 517 170 107 0 chr10 7966525 7966637 -137622651 + Charlie1 DNA MER1_type 2622 2745 -16 186 308 22 33 chr10 7966785 7966876 -137622412 - L3 LINE CR1 -957 620 531 748 165 0 0 chr10 7967360 7967481 -137621807 + FLAM_C SINE Alu 12 132 -11 2161 120 0 3 chr10 7967923 7968222 -137621066 + AluSx SINE Alu 1 298 -14 739 136 36 0 chr10 7968224 7968334 -137620954 - AluJo/FLAM SINE Alu -192 120 7 434 228 205 29 chr10 7968356 7968527 -137620761 - MIR SINE MIR -2 260 60 347 284 0 0 chr10 7968804 7968906 -137620382 + MIR3 SINE MIR 91 192 -16 1929 141 7 34 chr10 7969379 7969677 -137619611 + AluJb SINE Alu 1 290 -22 2454 74 7 7 chr10 7969685 7969995 -137619293 + AluY SINE Alu 1 310 -1 198 0 0 0 chr10 7970696 7970718 -137618570 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 1870 155 13 23 chr10 7970734 7971037 -137618251 + AluSx SINE Alu 1 300 -12 2317 109 3 0 chr10 7971214 7971525 -137617763 - AluSx SINE Alu 0 312 1 1286 193 41 4 chr10 7971985 7972229 -137617059 + AluJb SINE Alu 1 253 -59 29 0 0 0 chr10 7972614 7972643 -137616645 + AT_rich Low_complexity Low_complexity 1 29 0 377 199 69 30 chr10 7973289 7973420 -137615868 + MIR SINE MIR 126 261 -1 2244 81 7 0 chr10 7974299 7974594 -137614694 + L1PA7 LINE L1 5858 6154 0 1404 163 68 44 chr10 7974942 7975236 -137614052 + AluJo SINE Alu 7 307 -5 373 305 17 129 chr10 7975999 7976347 -137612941 - L2 LINE L2 -35 3237 2929 21 0 0 0 chr10 7976442 7976463 -137612825 + AT_rich Low_complexity Low_complexity 1 21 0 2206 124 3 0 chr10 7977070 7977376 -137611912 - AluSq SINE Alu -5 308 2 186 235 20 0 chr10 7978749 7978800 -137610488 - L3 LINE CR1 -1 1576 1525 299 271 192 6 chr10 7979107 7979284 -137610004 - L3 LINE CR1 -48 1529 1320 444 246 39 68 chr10 7979319 7979371 -137609917 + L1MC5 LINE L1 7717 7769 -192 2547 51 3 0 chr10 7979371 7979664 -137609624 - AluY SINE Alu -17 294 1 444 246 39 68 chr10 7979664 7979818 -137609470 + L1MC5 LINE L1 7769 7917 -44 233 376 102 0 chr10 7979843 7980040 -137609248 - L3 LINE CR1 -310 1267 1051 2864 84 0 0 chr10 7980434 7980813 -137608475 - L1PA8 LINE L1 0 6172 5794 445 277 97 9 chr10 7981201 7981390 -137607898 - MER20B DNA MER1_type -8 211 6 1241 217 125 9 chr10 7981627 7981954 -137607334 - MLT1A1 LTR MaLR 0 365 1 2134 134 0 0 chr10 7982351 7982650 -137606638 + AluY SINE Alu 1 299 -12 1282 199 83 11 chr10 7983235 7983501 -137605787 - AluJo SINE Alu -27 285 1 2661 42 0 3 chr10 7983678 7983984 -137605304 - AluY SINE Alu -6 305 1 306 220 34 0 chr10 7984361 7984420 -137604868 - MER2 DNA MER2_type 0 345 285 * 412 231 115 15 chr10 7984412 7984542 -137604746 - MER2 DNA MER2_type -96 143 1 2275 106 0 0 chr10 7984653 7984945 -137604343 + AluSc SINE Alu 1 292 -17 225 264 19 0 chr10 7985014 7985067 -137604221 - L2 LINE L2 -27 3286 3233 1237 210 52 21 chr10 7985250 7985540 -137603748 - AluSx SINE Alu -13 299 1 1592 133 18 0 chr10 7985566 7985791 -137603497 - AluSq SINE Alu -82 231 3 1682 172 3 10 chr10 7985967 7986263 -137603025 + AluSx SINE Alu 1 294 -18 2326 89 7 20 chr10 7986465 7986768 -137602520 - AluSq SINE Alu -14 299 1 1054 210 109 58 chr10 7987512 7987959 -137601329 - MLT1D LTR MaLR -5 462 1 1818 122 22 0 chr10 7988043 7988313 -137600975 - L1PA15 LINE L1 -3 6162 5887 430 250 21 0 chr10 7988771 7988867 -137600421 - MER91A DNA MER1_type -2 194 97 1378 152 0 17 chr10 7989076 7989307 -137599981 + AluJo SINE Alu 86 312 0 489 141 0 0 chr10 7989323 7989404 -137599884 + L1PB4 LINE L1 5874 5954 -200 760 235 7 0 chr10 7989516 7989665 -137599623 + L1PB4 LINE L1 6000 6149 -7 188 300 14 14 chr10 7991820 7991890 -137597398 + L2 LINE L2 2747 2816 -498 920 149 0 0 chr10 7992326 7992629 -137596659 + (GAGTG)n Simple_repeat Simple_repeat 1 303 0 233 224 0 35 chr10 7993161 7993219 -137596069 + CT-rich Low_complexity Low_complexity 2 57 0 2439 90 3 3 chr10 7993661 7993973 -137595315 + AluSp SINE Alu 1 312 -1 918 244 9 18 chr10 7994047 7994268 -137595020 - MER20 DNA MER1_type 0 219 1 408 245 99 140 chr10 7994309 7994824 -137594464 - L2 LINE L2 0 3313 2820 2761 289 104 5 chr10 7994863 7996100 -137593188 - L2 LINE L2 -764 2550 1191 1819 148 0 48 chr10 7997754 7998064 -137591224 - AluJb SINE Alu -12 300 6 2135 106 3 3 chr10 7998406 7998690 -137590598 + AluSq SINE Alu 2 285 -28 537 141 113 42 chr10 7998705 7998847 -137590441 + Charlie1 DNA MER1_type 2604 2755 -6 485 241 25 137 chr10 7998928 7999030 -137590258 - MIR SINE MIR -38 224 163 1994 132 0 0 chr10 7999030 7999325 -137589963 - AluSg SINE Alu -15 295 1 485 241 25 137 chr10 7999325 7999463 -137589825 - MIR SINE MIR -99 163 11 327 134 152 27 chr10 8000679 8000791 -137588497 + MER113 DNA MER1_type? 123 248 -273 1803 160 7 17 chr10 8000931 8001231 -137588057 + AluJo SINE Alu 1 297 -15 543 239 99 72 chr10 8001240 8001598 -137587690 + L1MC4 LINE L1 7083 7458 -584 1848 163 3 10 chr10 8001598 8001899 -137587389 + AluJb SINE Alu 1 299 -13 543 239 99 72 chr10 8001899 8001938 -137587350 + L1MC4 LINE L1 7458 7494 -548 1976 124 3 65 chr10 8002141 8002464 -137586824 + AluSx SINE Alu 1 303 -9 1418 154 0 0 chr10 8002549 8002769 -137586519 + L1MC1 LINE L1 6013 6232 -101 254 257 34 40 chr10 8002877 8003025 -137586263 + L1MC5 LINE L1 7631 7777 -184 1555 197 47 63 chr10 8003074 8003454 -137585834 + MLT1A2 LTR MaLR 1 374 0 612 252 28 69 chr10 8003752 8003970 -137585318 - MIR SINE MIR -53 209 1 230 239 0 0 chr10 8003970 8004014 -137585274 + L2 LINE L2 3266 3309 -4 569 254 73 6 chr10 8007339 8007516 -137581772 + MIR SINE MIR 33 221 -41 2379 91 0 0 chr10 8007650 8007946 -137581342 + AluSc SINE Alu 1 296 -13 595 190 0 50 chr10 8008913 8009034 -137580254 + AluJb SINE Alu 181 295 -17 3597 240 167 30 chr10 8009034 8009743 -137579545 - L1MC2 LINE L1 -214 6130 5520 2291 87 3 7 chr10 8009743 8010042 -137579246 - AluSg SINE Alu -12 298 1 3597 240 167 30 chr10 8010042 8011437 -137577851 - L1MC2 LINE L1 -824 5520 3701 27 29 0 0 chr10 8011762 8011796 -137577492 + AT_rich Low_complexity Low_complexity 1 34 0 2552 57 0 0 chr10 8013212 8013513 -137575775 - AluY SINE Alu -10 301 1 608 227 37 114 chr10 8013866 8014139 -137575149 - MIR SINE MIR -2 260 9 2265 103 0 22 chr10 8014851 8015034 -137574254 - AluSx SINE Alu 0 312 137 2093 86 41 7 chr10 8015034 8015325 -137573963 - AluY SINE Alu -10 301 1 2265 103 0 22 chr10 8015325 8015460 -137573828 - AluSx SINE Alu -175 137 1 2169 80 7 0 chr10 8016836 8017111 -137572177 - AluY SINE Alu -21 290 14 2359 101 0 0 chr10 8017116 8017423 -137571865 - AluSx SINE Alu -5 307 1 353 242 124 25 chr10 8017814 8017975 -137571313 + MER104 DNA Tc2 4 180 0 1838 134 180 0 chr10 8018191 8018497 -137570791 - MER46B DNA MER2_type 0 236 1 797 157 109 58 chr10 8019923 8020196 -137569092 + MER2 DNA MER2_type 2 320 -25 216 307 158 16 chr10 8020286 8020413 -137568875 - L2 LINE L2 -5 3308 3164 381 214 111 56 chr10 8020576 8020702 -137568586 - L2 LINE L2 -9 3304 3172 452 225 217 0 chr10 8020735 8020864 -137568424 + MER58C DNA MER1_type 59 215 0 448 323 90 62 chr10 8020943 8021398 -137567890 + L2 LINE L2 2804 3271 -1 288 194 56 14 chr10 8021754 8021826 -137567462 + MIR SINE MIR 77 151 -111 2528 69 0 0 chr10 8022090 8022395 -137566893 + AluY SINE Alu 1 305 -6 1724 145 4 0 chr10 8022426 8022674 -137566614 + AluJo SINE Alu 1 249 -63 2370 68 10 7 chr10 8022994 8023290 -137565998 + AluSx SINE Alu 1 297 -15 905 159 173 30 chr10 8023896 8024149 -137565139 - Charlie1b DNA MER1_type -244 279 1 1832 123 55 44 chr10 8024678 8024971 -137564317 + AluSx SINE Alu 1 296 -16 22 94 0 0 chr10 8025195 8025259 -137564029 + AT_rich Low_complexity Low_complexity 1 64 0 195 42 0 0 chr10 8025558 8025582 -137563706 + (TG)n Simple_repeat Simple_repeat 1 24 0 831 139 44 63 chr10 8025582 8025735 -137563553 - AluJo SINE Alu -158 154 5 493 225 231 0 chr10 8025891 8026064 -137563224 + MIR SINE MIR 45 257 -5 344 251 124 115 chr10 8026107 8026430 -137562858 - L2 LINE L2 -20 3252 2927 1801 146 43 0 chr10 8026662 8026943 -137562345 - AluSx SINE Alu -19 293 1 480 184 39 0 chr10 8027522 8027625 -137561663 - L1MB7 LINE L1 -14 6170 6064 197 250 59 88 chr10 8027676 8027744 -137561544 - L2 LINE L2 -52 3220 3155 233 275 20 114 chr10 8027757 8027906 -137561382 - L2 LINE L2 -954 2360 2226 1483 167 4 0 chr10 8027979 8028212 -137561076 + AluJb SINE Alu 2 235 -77 1180 145 0 0 chr10 8028212 8028384 -137560904 + AluSg/x SINE Alu 136 307 -3 1577 267 37 12 chr10 8028410 8028561 -137560727 + L1MC4a LINE L1 6453 6599 -1209 2262 76 10 3 chr10 8028561 8028852 -137560436 + AluSx SINE Alu 2 294 -18 1577 267 37 12 chr10 8028852 8029183 -137560105 + L1MC4a LINE L1 6599 6947 -861 1947 107 55 4 chr10 8029205 8029499 -137559789 + AluSq SINE Alu 2 309 0 283 280 19 0 chr10 8029506 8029613 -137559675 + L1MC4 LINE L1 7689 7797 -245 1064 211 118 7 chr10 8029628 8029932 -137559356 + LTR16A LTR ERVL 16 353 -97 305 271 0 12 chr10 8029935 8030020 -137559268 + C-rich Low_complexity Low_complexity 4 87 0 294 227 94 70 chr10 8030029 8030157 -137559131 + LTR16A LTR ERVL 320 450 0 646 202 82 91 chr10 8030158 8030401 -137558887 + HERV16 LTR ERVL 2 242 -4754 1161 292 85 16 chr10 8030530 8031503 -137557785 + HERV16 LTR ERVL 1584 2670 -2326 1206 185 39 5 chr10 8031503 8031708 -137557580 + Tigger5 DNA MER2_type 1 212 -2111 272 146 0 0 chr10 8031721 8031762 -137557526 + MERVL LTR ERVL 4353 4393 -1092 784 358 26 18 chr10 8031809 8032025 -137557263 + MERVL LTR ERVL 4525 4738 -1026 1291 195 30 47 chr10 8032025 8032323 -137556965 - AluJo SINE Alu -15 297 5 784 358 26 18 chr10 8032323 8032562 -137556726 + MERVL LTR ERVL 4738 4984 -780 736 264 122 30 chr10 8033064 8033393 -137555895 + LTR16A LTR ERVL 92 450 0 755 239 32 24 chr10 8033405 8033652 -137555636 + L1MC4 LINE L1 7793 8041 -1 241 368 19 7 chr10 8033728 8033883 -137555405 - L2 LINE L2 -1291 2023 1867 234 0 0 0 chr10 8034445 8034471 -137554817 + (A)n Simple_repeat Simple_repeat 1 26 0 395 186 21 21 chr10 8034517 8034614 -137554674 + MER96B DNA MER1_type? 278 374 -43 185 378 141 15 chr10 8036477 8036747 -137552541 + L2 LINE L2 2674 2977 -337 213 195 0 0 chr10 8036949 8036990 -137552298 + L2 LINE L2 3273 3313 0 1959 151 0 0 chr10 8037095 8037387 -137551901 - AluJo SINE Alu -20 292 1 225 0 0 0 chr10 8037532 8037557 -137551731 + (CTAGG)n Simple_repeat Simple_repeat 2 26 0 284 315 56 0 chr10 8037961 8038050 -137551238 - L2 LINE L2 -9 3263 3170 925 190 0 6 chr10 8039559 8039722 -137549566 + AluJb SINE Alu 137 298 -14 410 236 22 0 chr10 8039790 8039879 -137549409 - L2 LINE L2 -4 3309 3219 1628 182 3 18 chr10 8039942 8040228 -137549060 + AluJo SINE Alu 1 282 -30 2315 91 7 0 chr10 8040228 8040525 -137548763 - AluSg SINE Alu -11 299 1 21 0 0 0 chr10 8040563 8040584 -137548704 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr10 8040834 8040863 -137548425 + AT_rich Low_complexity Low_complexity 1 29 0 3534 155 37 28 chr10 8041930 8042580 -137546708 - L1MB3 LINE L1 -14 6169 5514 206 32 32 0 chr10 8043030 8043061 -137546227 + (TTTTG)n Simple_repeat Simple_repeat 1 32 0 306 275 70 76 chr10 8043794 8043965 -137545323 + MIR SINE MIR 63 232 -30 1476 137 111 19 chr10 8043980 8044091 -137545197 + AluJo SINE Alu 1 100 -212 2512 68 3 0 chr10 8044091 8044400 -137544888 + AluY SINE Alu 1 310 -1 1476 137 111 19 chr10 8044400 8044559 -137544729 + AluJo SINE Alu 100 296 -16 1029 152 0 0 chr10 8044693 8044844 -137544444 + FAM SINE Alu 16 166 -19 2482 78 13 0 chr10 8045343 8045649 -137543639 + AluSx SINE Alu 1 310 -2 3939 176 14 12 chr10 8045758 8046518 -137542770 - L1MC3 LINE L1 -3 7782 7021 254 159 26 142 chr10 8046845 8046958 -137542330 - L1ME3A LINE L1 -106 6064 5965 929 159 28 0 chr10 8047066 8047248 -137542040 - AluSg/x SINE Alu -3 307 121 24 67 0 0 chr10 8048380 8048425 -137540863 + AT_rich Low_complexity Low_complexity 1 45 0 1644 128 84 0 chr10 8048602 8048853 -137540435 - AluSx SINE Alu -18 294 23 263 342 129 13 chr10 8049372 8049527 -137539761 + MIR SINE MIR 20 192 -70 1411 264 76 9 chr10 8050415 8050865 -137538423 - MLT1E2 LTR MaLR 0 626 147 967 258 42 31 chr10 8051009 8051366 -137537922 - HAL1 LINE L1 -904 1603 1243 1586 151 50 7 chr10 8051371 8051650 -137537638 - AluJo SINE Alu 0 312 22 257 123 38 54 chr10 8051750 8051806 -137537482 - AluJo SINE Alu -261 42 1 319 279 62 0 chr10 8051806 8051935 -137537353 - HAL1 LINE L1 -1265 1242 1106 444 314 85 44 chr10 8051935 8052095 -137537193 - MLT1L LTR MaLR 0 615 463 2464 82 3 0 chr10 8052095 8052401 -137536887 + AluSx SINE Alu 1 307 -5 444 314 85 44 chr10 8052401 8052559 -137536729 - MLT1L LTR MaLR -152 463 284 376 317 113 52 chr10 8052566 8053080 -137536208 - HAL1 LINE L1 -1505 1002 458 227 244 197 16 chr10 8053633 8053760 -137535528 + L1ME4a LINE L1 5892 6041 -80 23 0 0 0 chr10 8054497 8054520 -137534768 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr10 8054752 8054781 -137534507 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr10 8055448 8055470 -137533818 + AT_rich Low_complexity Low_complexity 1 22 0 376 212 46 129 chr10 8055646 8055887 -137533401 - L1MC4 LINE L1 -87 7955 7735 2163 100 4 0 chr10 8055900 8056179 -137533109 + AluSp SINE Alu 27 306 -7 758 290 122 12 chr10 8056233 8056661 -137532627 - L1MC4 LINE L1 -537 7505 7031 1422 194 15 7 chr10 8056687 8056960 -137532328 + AluJo SINE Alu 15 289 -23 1027 201 24 36 chr10 8056961 8057210 -137532078 - L1MC4 LINE L1 -1013 7029 6784 299 329 66 51 chr10 8058123 8058260 -137531028 + L2 LINE L2 3134 3272 0 1051 260 100 57 chr10 8058410 8058921 -137530367 + Charlie8 DNA MER1_type 12 544 -1873 2295 92 0 10 chr10 8059331 8059626 -137529662 + AluSg SINE Alu 1 292 -18 518 184 48 0 chr10 8060370 8060473 -137528815 - MER114 LTR ERV -95 553 446 281 130 0 0 chr10 8060631 8060677 -137528611 - AluSc SINE Alu -119 180 135 23 54 0 0 chr10 8061192 8061229 -137528059 + AT_rich Low_complexity Low_complexity 1 37 0 262 224 52 43 chr10 8061292 8061408 -137527880 - MER113 DNA MER1_type? -404 117 1 181 377 35 13 chr10 8061563 8061791 -137527497 - L2 LINE L2 -556 2758 2526 551 301 31 35 chr10 8061975 8062231 -137527057 - MER102b DNA MER1_type -3 338 84 224 267 93 13 chr10 8062237 8062312 -137526976 + MIR SINE MIR 159 239 -23 695 161 65 30 chr10 8062622 8062790 -137526498 - MER5A DNA MER1_type 0 189 16 631 258 60 0 chr10 8062932 8063099 -137526189 + MER5A DNA MER1_type 13 189 0 1254 218 107 3 chr10 8063653 8063951 -137525337 + MER2 DNA MER2_type 6 334 -11 2315 117 0 0 chr10 8064167 8064476 -137524812 - AluSx SINE Alu -3 309 1 344 290 15 70 chr10 8065403 8065603 -137523685 + Charlie8 DNA MER1_type 1 189 -2228 719 190 0 0 chr10 8066079 8066195 -137523093 - FLAM_C SINE Alu -17 116 1 1166 253 30 22 chr10 8066697 8067060 -137522228 - MLT1B LTR MaLR -7 383 18 984 247 74 54 chr10 8067487 8068068 -137521220 + L1MC5 LINE L1 7261 7774 -187 325 336 160 15 chr10 8068090 8068358 -137520930 + L2 LINE L2 2988 3294 -19 2524 71 0 0 chr10 8068728 8069036 -137520252 - AluSx SINE Alu -4 308 1 1822 226 95 74 chr10 8069036 8069605 -137519683 - L1MC5 LINE L1 -435 7526 6934 2282 93 0 0 chr10 8069605 8069896 -137519392 - AluSg SINE Alu -19 291 1 1822 226 95 74 chr10 8069896 8070126 -137519162 - L1MC5 LINE L1 -1027 6934 6710 36 0 0 0 chr10 8070132 8070168 -137519120 + AT_rich Low_complexity Low_complexity 1 36 0 2279 179 13 30 chr10 8070178 8070652 -137518636 - L1MA7 LINE L1 -26 6265 5800 998 134 5 80 chr10 8070656 8070788 -137518500 - L1MA3 LINE L1 0 6305 6191 2017 137 6 19 chr10 8070788 8071102 -137518186 - AluSx SINE Alu -2 310 1 998 134 5 80 chr10 8071102 8071170 -137518118 - L1MA3 LINE L1 -114 6191 6120 504 188 0 0 chr10 8071170 8071250 -137518038 + AluJ/FLAM SINE Alu 5 84 -228 393 162 0 0 chr10 8071250 8071318 -137517970 - L1MA3 LINE L1 -175 6130 6063 * 2889 143 54 6 chr10 8071298 8071813 -137517475 - L1MA7 LINE L1 -475 5816 5293 240 77 0 0 chr10 8072251 8072290 -137516998 - L1MA7 LINE L1 -991 5300 5262 * 1833 191 32 8 chr10 8072286 8072688 -137516600 - L1 LINE L1 -816 5330 4919 278 198 0 62 chr10 8072693 8072774 -137516514 - L1MC5 LINE L1 -1237 6724 6649 1634 108 18 0 chr10 8073370 8073592 -137515696 + MER30 DNA MER1_type 5 230 0 209 308 219 31 chr10 8074182 8074530 -137514758 + L2 LINE L2 1932 2213 -1101 2171 95 57 0 chr10 8074530 8074826 -137514462 - AluSp SINE Alu 0 313 1 209 308 219 31 chr10 8074826 8075051 -137514237 + L2 LINE L2 2213 2613 -701 1406 157 25 98 chr10 8075198 8075333 -137513955 + AluJb SINE Alu 1 144 -168 1964 127 0 0 chr10 8075333 8075601 -137513687 + AluSq SINE Alu 1 268 -45 1406 157 25 98 chr10 8075601 8075613 -137513675 + AluJb SINE Alu 144 155 -157 2135 139 0 0 chr10 8075613 8075915 -137513373 + AluSx SINE Alu 1 302 -10 1406 157 25 98 chr10 8075915 8076084 -137513204 + AluJb SINE Alu 155 295 -17 285 341 67 39 chr10 8076259 8076438 -137512850 - MIR SINE MIR -56 206 23 2174 128 0 7 chr10 8076607 8076934 -137512354 - AluSx SINE Alu 0 312 1 203 79 26 0 chr10 8077162 8077200 -137512088 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 214 273 0 80 chr10 8077743 8077831 -137511457 - MIR SINE MIR -157 105 25 2395 71 0 0 chr10 8078410 8078704 -137510584 - AluY SINE Alu -17 294 1 2470 80 0 3 chr10 8079089 8079403 -137509885 - AluSq SINE Alu 0 313 1 271 336 31 8 chr10 8079516 8079644 -137509644 - L2 LINE L2 -1 3271 3141 25 0 0 0 chr10 8080121 8080146 -137509142 + AT_rich Low_complexity Low_complexity 1 25 0 1638 190 48 0 chr10 8080417 8080712 -137508576 - AluJb SINE Alu -3 309 1 202 232 126 21 chr10 8080966 8081061 -137508227 + MIR SINE MIR 99 203 -59 1675 162 36 4 chr10 8081383 8081661 -137507627 - AluJo SINE Alu -25 287 1 2413 87 0 3 chr10 8082619 8082928 -137506360 - AluSc SINE Alu -1 308 1 633 265 94 32 chr10 8083059 8083452 -137505836 - L1ME LINE L1 -326 5836 5450 2393 69 7 0 chr10 8084205 8084508 -137504780 - AluY SINE Alu -6 305 1 3390 168 73 80 chr10 8084721 8085687 -137503601 + Looper DNA T2_type 1 960 -598 1772 179 3 3 chr10 8085707 8085998 -137503290 - AluJo SINE Alu -19 293 3 716 172 61 37 chr10 8085998 8086021 -137503267 + Looper DNA T2_type 1392 1413 -145 2021 122 3 16 chr10 8086021 8086324 -137502964 - AluSx SINE Alu -13 299 1 716 172 61 37 chr10 8086324 8086463 -137502825 + Looper DNA T2_type 1413 1558 0 671 251 96 35 chr10 8087326 8087525 -137501763 - MIR SINE MIR -21 241 31 1959 148 0 10 chr10 8087917 8088222 -137501066 - AluJb SINE Alu -10 302 1 2154 126 3 0 chr10 8088634 8088928 -137500360 + AluSx SINE Alu 1 295 -17 213 175 0 0 chr10 8088928 8088968 -137500320 + (TA)n Simple_repeat Simple_repeat 1 40 0 1249 263 51 47 chr10 8089151 8089737 -137499551 - L2 LINE L2 0 3313 2736 654 265 44 22 chr10 8089750 8090022 -137499266 - L1MC5 LINE L1 -31 7930 7653 1522 202 20 17 chr10 8090024 8090326 -137498962 - AluJo SINE Alu -9 303 1 917 153 0 0 chr10 8090345 8090482 -137498806 - FRAM SINE Alu -30 146 10 2162 200 50 79 chr10 8090490 8091290 -137497998 - L1MC5 LINE L1 -305 7656 6880 3152 213 91 61 chr10 8091299 8092328 -137496960 - MER63D DNA MER1_type 0 1061 2 2220 240 112 105 chr10 8093160 8094044 -137495244 + HAL1 LINE L1 1 877 -1630 842 135 0 15 chr10 8094044 8094177 -137495111 + FLAM_C SINE Alu 3 133 0 2220 240 112 105 chr10 8094177 8094445 -137494843 + HAL1 LINE L1 877 1165 -1342 2159 65 41 27 chr10 8094445 8094739 -137494549 + AluSx SINE Alu 1 298 -14 2220 240 112 105 chr10 8094739 8094817 -137494471 + HAL1 LINE L1 1165 1241 -1266 883 228 31 9 chr10 8094822 8095050 -137494238 + L1MC5 LINE L1 6644 6876 -1085 2010 235 37 8 chr10 8095064 8095549 -137493739 + MER63C DNA MER1_type 1 499 -431 220 282 0 39 chr10 8096905 8096983 -137492305 + MIR SINE MIR 180 254 -8 250 284 0 0 chr10 8097047 8097136 -137492152 + (TG)n Simple_repeat Simple_repeat 1 89 0 270 299 39 0 chr10 8097150 8097227 -137492061 + L2 LINE L2 2990 3069 -244 2352 58 4 0 chr10 8097227 8097501 -137491787 + AluY SINE Alu 7 281 -30 523 0 0 0 chr10 8097501 8097559 -137491729 + (TAAA)n Simple_repeat Simple_repeat 3 140 0 504 263 72 13 chr10 8097940 8098092 -137491196 + L2 LINE L2 3150 3310 -3 1997 151 0 16 chr10 8098229 8098546 -137490742 + AluJb SINE Alu 1 312 0 676 235 31 131 chr10 8098768 8099029 -137490259 - L1MC5 LINE L1 -852 7109 6902 2246 109 0 40 chr10 8099029 8099206 -137490082 - AluSg1 SINE Alu -1 308 148 2197 88 3 10 chr10 8099206 8099503 -137489785 - AluY SINE Alu -16 295 1 2246 109 0 40 chr10 8099503 8099646 -137489642 - AluSg1 SINE Alu -161 148 1 676 235 31 131 chr10 8099646 8099797 -137489491 - L1MC5 LINE L1 -1059 6902 6738 1082 258 79 21 chr10 8099809 8100698 -137488590 - L1ME LINE L1 -4649 1431 464 1602 200 70 55 chr10 8100758 8101283 -137488005 - L1ME1 LINE L1 -8 6158 5626 608 200 39 15 chr10 8101284 8101414 -137487874 + LTR40b LTR ERVL 330 462 0 554 242 25 12 chr10 8101414 8101569 -137487719 - L1ME1 LINE L1 -1473 4673 4516 2019 137 7 3 chr10 8101569 8101868 -137487420 + AluSx SINE Alu 1 300 -12 361 219 0 62 chr10 8101873 8101969 -137487319 - L1MC4 LINE L1 -1339 6703 6614 213 121 0 0 chr10 8101969 8102002 -137487286 + (TA)n Simple_repeat Simple_repeat 1 33 0 333 235 59 0 chr10 8102005 8102141 -137487147 - L1ME1 LINE L1 -1625 4521 4378 1892 183 28 5 chr10 8102161 8102549 -137486739 - L1MC1 LINE L1 -6 6327 5931 775 218 55 27 chr10 8102550 8102807 -137486481 - L1MA8 LINE L1 -8 6283 6020 400 217 0 0 chr10 8102805 8102888 -137486400 - L1MC1 LINE L1 -483 5695 5613 * 993 225 17 20 chr10 8102885 8103183 -137486105 - L1MC1 LINE L1 -834 5312 5016 2215 58 0 41 chr10 8103426 8103756 -137485532 + AluY SINE Alu 1 318 0 703 315 142 10 chr10 8104449 8104930 -137484358 - L2 LINE L2 -30 3283 2733 2059 128 6 10 chr10 8105217 8105530 -137483758 + AluSx SINE Alu 1 312 0 2604 135 31 2 chr10 8105993 8106414 -137482874 - Tigger2a DNA MER2_type -1 433 1 613 319 16 20 chr10 8106761 8107009 -137482279 + MIR SINE MIR 2 248 -14 468 296 63 6 chr10 8107061 8107220 -137482068 - MIR SINE MIR -92 170 3 23 0 0 0 chr10 8107347 8107370 -137481918 + AT_rich Low_complexity Low_complexity 1 23 0 219 36 0 0 chr10 8107487 8107515 -137481773 + (TG)n Simple_repeat Simple_repeat 2 29 0 420 306 132 3 chr10 8107699 8108010 -137481278 - L1ME LINE L1 -452 5669 5319 2446 97 0 0 chr10 8109526 8109834 -137479454 - AluSp SINE Alu -5 308 1 210 71 0 0 chr10 8110304 8110332 -137478956 + (T)n Simple_repeat Simple_repeat 1 28 0 28 48 0 0 chr10 8111170 8111212 -137478076 + AT_rich Low_complexity Low_complexity 1 42 0 28 0 0 0 chr10 8112735 8112763 -137476525 + AT_rich Low_complexity Low_complexity 1 28 0 34 89 0 0 chr10 8114048 8114138 -137475150 + AT_rich Low_complexity Low_complexity 1 90 0 440 319 77 6 chr10 8115737 8115906 -137473382 - MIR3 SINE MIR -7 201 21 472 214 10 0 chr10 8116250 8116353 -137472935 - MER69 DNA AcHobo 0 2526 2423 305 250 147 38 chr10 8116492 8116676 -137472612 + L1ME3A LINE L1 5956 6159 -11 450 0 0 0 chr10 8116784 8116834 -137472454 + (TATG)n Simple_repeat Simple_repeat 2 51 0 1903 160 4 0 chr10 8116835 8117116 -137472172 - AluSx SINE Alu -29 283 2 21 0 0 0 chr10 8117187 8117208 -137472080 + AT_rich Low_complexity Low_complexity 1 21 0 1551 166 6 94 chr10 8118016 8118347 -137470941 + AluJo SINE Alu 1 302 -10 2089 134 0 13 chr10 8119045 8119352 -137469936 + AluJb SINE Alu 3 305 -7 324 48 0 0 chr10 8119562 8119604 -137469684 + (CA)n Simple_repeat Simple_repeat 2 43 0 318 287 47 53 chr10 8119804 8119954 -137469334 + MIR3 SINE MIR 1 149 -59 278 200 0 0 chr10 8120450 8120500 -137468788 - MIR3 SINE MIR -34 174 125 417 255 83 88 chr10 8120643 8120835 -137468453 + L3 LINE CR1 1308 1498 -79 4960 224 73 27 chr10 8120875 8121864 -137467424 - L1MC4 LINE L1 0 8042 7100 2110 128 86 37 chr10 8121864 8122270 -137467018 - MSTC LTR MaLR -2 426 1 4960 224 73 27 chr10 8122270 8122482 -137466806 - L1MC4 LINE L1 -942 7100 6899 2283 92 0 3 chr10 8122482 8122777 -137466511 - AluSq SINE Alu -19 294 1 4960 224 73 27 chr10 8122777 8123149 -137466139 - L1MC4 LINE L1 -1143 6899 6546 882 159 11 21 chr10 8123149 8123338 -137465950 + L1MB4 LINE L1 5980 6166 -14 285 51 0 0 chr10 8123339 8123378 -137465910 + (CA)n Simple_repeat Simple_repeat 2 40 0 4960 224 73 27 chr10 8123378 8123682 -137465606 - L1MC4 LINE L1 -1495 6547 5984 1741 143 23 33 chr10 8124017 8124318 -137464970 - AluJb SINE Alu -14 298 1 393 286 129 18 chr10 8124596 8124767 -137464521 + MIR SINE MIR 47 236 -26 2293 92 10 0 chr10 8125043 8125346 -137463942 + AluY SINE Alu 1 306 -5 206 158 0 26 chr10 8125556 8125594 -137463694 + T-rich Low_complexity Low_complexity 1 37 0 908 280 70 45 chr10 8126417 8127043 -137462245 + Charlie7 DNA MER1_type 44 685 -1927 1003 253 37 0 chr10 8127407 8127648 -137461640 - MIR SINE MIR 0 262 13 371 315 178 35 chr10 8127683 8128421 -137460867 + L2 LINE L2 2246 3078 -194 222 220 0 0 chr10 8130447 8130506 -137458782 + A-rich Low_complexity Low_complexity 1 59 0 237 65 0 0 chr10 8130915 8130946 -137458342 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 2469 54 3 13 chr10 8132021 8132334 -137456954 + AluY SINE Alu 1 310 -1 2173 109 0 3 chr10 8132962 8133256 -137456032 + AluSx SINE Alu 9 301 -11 296 279 30 79 chr10 8135572 8135737 -137453551 - MIR SINE MIR -46 216 60 2498 66 0 0 chr10 8137349 8137651 -137451637 + AluSg SINE Alu 1 302 -8 2103 126 10 3 chr10 8137682 8137983 -137451305 + AluSx SINE Alu 1 303 -9 23 54 0 0 chr10 8138608 8138645 -137450643 + AT_rich Low_complexity Low_complexity 1 37 0 512 321 101 42 chr10 8139012 8139625 -137449663 - L2 LINE L2 -1 3312 2668 977 296 302 24 chr10 8139729 8141252 -137448036 - L2 LINE L2 -1296 2018 72 994 154 56 2 chr10 8141536 8141823 -137447465 + MER2 DNA MER2_type 1 345 0 1469 171 7 36 chr10 8141950 8142225 -137447063 + AluJo SINE Alu 1 267 -45 42 0 0 0 chr10 8142239 8142281 -137447007 + AT_rich Low_complexity Low_complexity 1 42 0 429 20 0 0 chr10 8142286 8142336 -137446952 + (TG)n Simple_repeat Simple_repeat 2 51 0 540 234 170 23 chr10 8143440 8143658 -137445630 - MER112 DNA MER1_type -3 257 8 26 0 0 0 chr10 8145224 8145250 -137444038 + AT_rich Low_complexity Low_complexity 1 26 0 183 42 0 0 chr10 8145572 8145596 -137443692 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 21 0 0 0 chr10 8147005 8147026 -137442262 + AT_rich Low_complexity Low_complexity 1 21 0 2199 108 23 3 chr10 8147508 8147814 -137441474 + AluSq SINE Alu 1 312 -1 664 106 0 58 chr10 8147918 8148022 -137441266 + AluJ/FLAM SINE Alu 1 98 -214 406 236 87 24 chr10 8150185 8150312 -137438976 + L2 LINE L2 3173 3307 -6 1323 171 148 4 chr10 8151386 8151650 -137437638 - AluJb SINE Alu 0 302 1 1539 191 24 3 chr10 8151906 8152200 -137437088 + AluJb SINE Alu 1 300 -12 27 49 0 0 chr10 8152810 8152851 -137436437 + AT_rich Low_complexity Low_complexity 1 41 0 466 269 99 60 chr10 8153149 8153350 -137435938 - MIR SINE MIR -51 211 3 207 211 19 0 chr10 8154430 8154482 -137434806 + GA-rich Low_complexity Low_complexity 2 54 0 1852 177 0 7 chr10 8154656 8154966 -137434322 - AluJb SINE Alu -4 308 1 405 226 169 16 chr10 8155837 8155961 -137433327 + HsTC2 DNA Tc2 2 144 -1754 * 1198 229 108 20 chr10 8155959 8156366 -137432922 + HsTC2 DNA Tc2 1282 1900 0 1687 157 0 41 chr10 8156423 8156743 -137432545 - AluSx SINE Alu 0 308 1 780 304 170 23 chr10 8157032 8157195 -137432093 - L2 LINE L2 0 3313 3175 2024 125 7 0 chr10 8157195 8157514 -137431774 + AluSx SINE Alu 1 321 0 2203 63 45 0 chr10 8157516 8157803 -137431485 + AluY SINE Alu 1 300 -11 780 304 170 23 chr10 8157803 8158292 -137430996 - L2 LINE L2 -138 3175 2553 5833 148 16 16 chr10 8158709 8159848 -137429440 - L1MC1 LINE L1 0 6333 5196 568 304 44 5 chr10 8159937 8160141 -137429147 - MIR SINE MIR -8 254 43 529 351 67 33 chr10 8160510 8161029 -137428259 - L2 LINE L2 -650 2664 2128 289 277 225 8 chr10 8161073 8161322 -137427966 + HAL1 LINE L1 16 318 -2189 1416 276 161 21 chr10 8161526 8161778 -137427510 + HAL1 LINE L1 640 855 -1652 396 0 0 0 chr10 8161778 8161822 -137427466 + (CA)n Simple_repeat Simple_repeat 2 45 0 1416 276 161 21 chr10 8161822 8162504 -137426784 + HAL1 LINE L1 855 1705 -802 180 242 0 0 chr10 8162639 8162672 -137426616 - L2 LINE L2 -86 3186 3154 2080 142 9 22 chr10 8162873 8163189 -137426099 + AluJo SINE Alu 1 312 0 198 250 0 0 chr10 8163475 8163519 -137425769 + L2 LINE L2 3265 3308 -5 247 301 16 75 chr10 8164940 8165126 -137424162 - Charlie8 DNA MER1_type -2230 187 13 216 315 71 54 chr10 8165148 8165332 -137423956 + L2 LINE L2 2542 2728 -586 387 0 0 0 chr10 8166294 8166337 -137422951 + (TG)n Simple_repeat Simple_repeat 2 44 0 433 315 164 25 chr10 8167787 8168190 -137421098 + L2 LINE L2 2855 3313 0 236 312 239 4 chr10 8168301 8168548 -137420740 + L2 LINE L2 2670 2974 -340 1826 181 3 3 chr10 8168642 8168946 -137420342 + AluJb SINE Alu 1 304 -8 798 154 0 0 chr10 8169132 8169262 -137420026 - FLAM_C SINE Alu -3 130 1 181 331 94 24 chr10 8169318 8169445 -137419843 + L2 LINE L2 2034 2169 -1145 555 305 159 11 chr10 8169527 8170024 -137419264 - L2 LINE L2 -25 3288 2713 1601 166 3 86 chr10 8170266 8170591 -137418697 - AluJo SINE Alu -14 298 1 341 168 25 134 chr10 8171833 8171952 -137417336 - HsTC2a DNA Tc2 -4 738 633 597 271 33 11 chr10 8171987 8172168 -137417120 - HsTC2a DNA Tc2 -515 229 45 220 363 25 55 chr10 8172405 8172606 -137416682 - L2 LINE L2 -251 3062 2868 2342 193 55 4 chr10 8172868 8173391 -137415897 - MER82 DNA MER2_type -94 559 10 582 224 104 37 chr10 8173429 8173893 -137415395 - MLT1H LTR MaLR -16 533 12 180 250 120 30 chr10 8173967 8174067 -137415221 - MIR SINE MIR -89 173 65 236 280 101 0 chr10 8175670 8175791 -137413497 - MIR3 SINE MIR -65 143 10 413 211 72 53 chr10 8178191 8178399 -137410889 + L1MC4 LINE L1 7831 8042 0 26 0 0 27 chr10 8178399 8178410 -137410878 + AT_rich Low_complexity Low_complexity 1 11 -25 2168 109 3 0 chr10 8178410 8178695 -137410593 + AluSg SINE Alu 1 286 -24 26 0 0 27 chr10 8178695 8178720 -137410568 + AT_rich Low_complexity Low_complexity 11 36 0 21 36 0 0 chr10 8179822 8179850 -137409438 + AT_rich Low_complexity Low_complexity 1 28 0 297 0 0 0 chr10 8179997 8180030 -137409258 + (TC)n Simple_repeat Simple_repeat 1 33 0 21 0 0 0 chr10 8180099 8180120 -137409168 + AT_rich Low_complexity Low_complexity 1 21 0 39 38 0 0 chr10 8180505 8180558 -137408730 + AT_rich Low_complexity Low_complexity 1 53 0 483 229 62 3 chr10 8180599 8180749 -137408539 + L1ME3A LINE L1 5790 5946 -224 2238 82 0 20 chr10 8181055 8181341 -137407947 + AluY SINE Alu 1 282 -29 216 0 0 0 chr10 8181341 8181365 -137407923 + (CA)n Simple_repeat Simple_repeat 1 24 0 193 122 0 61 chr10 8181689 8181738 -137407550 + (CAAAAA)n Simple_repeat Simple_repeat 2 47 0 358 107 0 18 chr10 8182557 8182613 -137406675 - MER58 DNA MER1_type 0 2420 2366 333 356 109 24 chr10 8182631 8182878 -137406410 - L2 LINE L2 -172 3100 2833 2032 162 0 3 chr10 8184043 8184351 -137404937 - AluJb SINE Alu -5 307 1 190 218 73 0 chr10 8185173 8185228 -137404060 - MIR SINE MIR -60 148 90 1828 91 0 8 chr10 8185768 8186022 -137403266 + L1PA6 LINE L1 5903 6154 0 243 265 0 0 chr10 8187309 8187411 -137401877 + GA-rich Low_complexity Low_complexity 4 105 0 187 197 0 28 chr10 8187559 8187630 -137401658 + GA-rich Low_complexity Low_complexity 2 70 0 542 159 28 28 chr10 8187782 8187927 -137401361 + GA-rich Low_complexity Low_complexity 6 150 0 22 35 0 0 chr10 8189148 8189177 -137400111 + AT_rich Low_complexity Low_complexity 1 29 0 321 208 62 92 chr10 8189224 8189354 -137399934 - MIR SINE MIR -70 192 67 195 232 116 29 chr10 8189875 8189944 -137399344 + MIR SINE MIR 176 250 -12 807 244 87 30 chr10 8190778 8191008 -137398280 - MIR SINE MIR -19 243 1 1113 190 194 12 chr10 8191228 8191340 -137397948 + AluJo SINE Alu 1 91 -211 279 0 0 0 chr10 8191340 8191371 -137397917 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1113 190 194 12 chr10 8191371 8191505 -137397783 + AluJo SINE Alu 91 292 -10 22 35 0 0 chr10 8191636 8191665 -137397623 + AT_rich Low_complexity Low_complexity 1 29 0 272 199 15 31 chr10 8191988 8192063 -137397225 + MIR SINE MIR 12 85 -123 315 271 216 5 chr10 8192496 8192695 -137396593 - MIR SINE MIR -8 254 14 267 296 12 0 chr10 8192800 8192881 -137396407 - MIR3 SINE MIR -2 206 125 311 228 152 0 chr10 8194638 8194730 -137394558 - MER94 DNA DNA -10 124 19 325 292 199 18 chr10 8195197 8195416 -137393872 + MIR SINE MIR 7 262 0 233 170 21 21 chr10 8195863 8195910 -137393378 + L2 LINE L2 3214 3260 -12 2030 124 0 0 chr10 8196048 8196330 -137392958 + AluSg SINE Alu 1 282 -28 432 37 0 0 chr10 8196330 8196384 -137392904 + (CA)n Simple_repeat Simple_repeat 2 55 0 2345 87 7 0 chr10 8196992 8197291 -137391997 + AluSc SINE Alu 1 301 -8 245 316 38 0 chr10 8197573 8197652 -137391636 - L2 LINE L2 -24 3289 3208 204 309 15 15 chr10 8197815 8197883 -137391405 - L2 LINE L2 -8 3264 3197 236 277 0 0 chr10 8198118 8198183 -137391105 + MER20 DNA MER1_type 132 196 -23 1308 128 0 15 chr10 8198433 8198612 -137390676 - AluSg/x SINE Alu 0 312 135 2089 94 45 3 chr10 8198612 8198900 -137390388 - AluY SINE Alu -11 300 1 1308 128 0 15 chr10 8198900 8198915 -137390373 - AluSg/x SINE Alu -177 135 121 236 280 101 0 chr10 8201433 8201554 -137387734 + MIR3 SINE MIR 10 148 -65 180 250 120 30 chr10 8203157 8203257 -137386031 + MIR SINE MIR 65 173 -89 582 224 104 37 chr10 8203331 8203795 -137385493 + MLT1H LTR MaLR 12 533 -16 2342 193 55 4 chr10 8203833 8204356 -137384932 + MER82 DNA MER2_type 10 559 -94 220 363 25 55 chr10 8204618 8204819 -137384469 + L2 LINE L2 2868 3062 -251 597 271 33 11 chr10 8205056 8205237 -137384051 + HsTC2b DNA Tc2 45 229 -686 341 168 25 134 chr10 8205272 8205391 -137383897 + HsTC2b DNA Tc2 809 914 -4 1598 167 3 84 chr10 8206632 8206955 -137382333 + AluJo SINE Alu 1 297 -15 555 305 159 11 chr10 8207197 8207694 -137381594 + L2 LINE L2 2713 3288 -25 181 331 94 24 chr10 8207776 8207903 -137381385 - L2 LINE L2 -1145 2169 2034 798 154 0 0 chr10 8207959 8208089 -137381199 + FLAM_C SINE Alu 1 130 -3 1813 184 3 3 chr10 8208275 8208579 -137380709 - AluJb SINE Alu -8 304 1 236 312 239 4 chr10 8208673 8208920 -137380368 - L2 LINE L2 -340 2974 2670 433 315 164 25 chr10 8209031 8209434 -137379854 - L2 LINE L2 0 3313 2855 387 0 0 0 chr10 8210884 8210927 -137378361 + (CA)n Simple_repeat Simple_repeat 2 44 0 216 315 71 54 chr10 8211889 8212073 -137377215 - L2 LINE L2 -586 2728 2542 247 301 16 75 chr10 8212095 8212281 -137377007 + Charlie8 DNA MER1_type 13 187 -2230 1256 116 72 0 chr10 8212476 8212657 -137376631 + AluSg/x SINE Alu 112 305 -7 231 228 0 0 chr10 8212728 8212785 -137376503 + L1ME3A LINE L1 6103 6159 -11 2154 131 0 0 chr10 8213025 8213323 -137375965 + AluSx SINE Alu 1 298 -14 228 67 0 0 chr10 8213324 8213354 -137375934 + (TTTC)n Simple_repeat Simple_repeat 2 31 0 197 292 0 97 chr10 8213444 8213516 -137375772 + L2 LINE L2 3127 3191 -81 2315 91 30 0 chr10 8213914 8214212 -137375076 - AluSx SINE Alu -1 311 5 375 23 0 0 chr10 8214496 8214540 -137374748 + (TA)n Simple_repeat Simple_repeat 1 44 0 1567 166 30 51 chr10 8215788 8216084 -137373204 + AluJo SINE Alu 1 290 -22 559 265 256 2 chr10 8216304 8216713 -137372575 + MLT1F1 LTR MaLR 40 567 0 385 339 91 61 chr10 8217352 8217780 -137371508 + L1MC4a LINE L1 6051 6491 -1317 2300 82 13 38 chr10 8217782 8218099 -137371189 - AluSc SINE Alu 0 309 1 846 102 8 8 chr10 8218134 8218252 -137371036 + FLAM_C SINE Alu 1 118 -15 1002 256 31 55 chr10 8218284 8218667 -137370621 + L1MC4a LINE L1 6548 6921 -887 253 272 0 16 chr10 8218667 8218792 -137370496 + GA-rich Low_complexity Low_complexity 2 124 0 400 259 121 91 chr10 8218889 8219305 -137369983 + L1MC5 LINE L1 7026 7475 -486 1990 139 0 0 chr10 8219305 8219578 -137369710 + AluJo SINE Alu 1 273 -39 400 259 121 91 chr10 8219578 8219890 -137369398 + L1MC5 LINE L1 7475 7776 -185 233 323 0 23 chr10 8221068 8221201 -137368087 + (TA)n Simple_repeat Simple_repeat 2 131 0 24 53 0 0 chr10 8221461 8221499 -137367789 + AT_rich Low_complexity Low_complexity 1 38 0 257 138 0 35 chr10 8221571 8221629 -137367659 + (TATG)n Simple_repeat Simple_repeat 3 58 0 523 275 53 6 chr10 8223482 8223653 -137365635 + MLT1K LTR MaLR 84 262 -326 30 0 0 0 chr10 8223954 8223984 -137365304 + AT_rich Low_complexity Low_complexity 1 30 0 1611 174 50 30 chr10 8224013 8224182 -137365106 - AluJo SINE Alu -8 304 125 2040 129 61 3 chr10 8224182 8224476 -137364812 - AluSx SINE Alu -1 311 1 1611 174 50 30 chr10 8224476 8224604 -137364684 - AluJo SINE Alu -187 125 1 363 246 27 27 chr10 8225118 8225228 -137364060 + L1ME LINE L1 5520 5629 -492 252 283 53 33 chr10 8225235 8225387 -137363901 + L1ME LINE L1 5672 5826 -295 1899 165 20 3 chr10 8225447 8225744 -137363544 - AluJb SINE Alu -10 302 1 2249 112 0 0 chr10 8226700 8227003 -137362285 + AluSx SINE Alu 1 303 -9 1005 164 0 0 chr10 8228912 8229092 -137360196 - AluJb SINE Alu 0 315 136 299 161 36 0 chr10 8229764 8229820 -137359468 + MLT1K LTR MaLR 531 588 0 2055 140 0 16 chr10 8230084 8230399 -137358889 + AluSx SINE Alu 1 310 -2 23 86 0 0 chr10 8230728 8230786 -137358502 + AT_rich Low_complexity Low_complexity 1 58 0 642 174 90 7 chr10 8232780 8232935 -137356353 - MER58 DNA MER1_type -2252 168 1 2461 83 0 6 chr10 8233406 8233719 -137355569 - AluY SINE Alu 0 311 1 1033 146 6 6 chr10 8233722 8233887 -137355401 - FRAM SINE Alu -12 164 1 1291 133 0 15 chr10 8236064 8236079 -137353209 + AluSg/x SINE Alu 121 135 -177 2064 97 45 3 chr10 8236079 8236367 -137352921 + AluY SINE Alu 1 300 -11 1291 133 0 15 chr10 8236367 8236546 -137352742 + AluSg/x SINE Alu 135 312 0 236 277 0 0 chr10 8236796 8236861 -137352427 - MER20 DNA MER1_type -23 196 132 204 309 15 15 chr10 8237096 8237164 -137352124 + L2 LINE L2 3197 3264 -8 245 316 38 0 chr10 8237327 8237406 -137351882 + L2 LINE L2 3208 3289 -24 2326 90 10 0 chr10 8237688 8237989 -137351299 - AluSx SINE Alu -8 304 1 1142 227 126 43 chr10 8237989 8238543 -137350745 - L1MC5 LINE L1 -435 7526 6927 1916 102 0 0 chr10 8238558 8238802 -137350486 - AluSx SINE Alu -19 293 50 1530 172 0 44 chr10 8239500 8239796 -137349492 + AluJb SINE Alu 23 305 -7 25 0 0 0 chr10 8240066 8240091 -137349197 + AT_rich Low_complexity Low_complexity 1 25 0 315 238 50 0 chr10 8240134 8240235 -137349053 - L1ME LINE L1 -441 5663 5558 309 345 74 5 chr10 8240502 8240705 -137348583 - L1ME LINE L1 -913 5216 5000 686 273 97 20 chr10 8241635 8242038 -137347250 - L1ME LINE L1 -3453 2676 2243 374 259 126 42 chr10 8242047 8242309 -137346979 - L1ME LINE L1 -4049 2261 1978 1450 199 7 0 chr10 8242405 8242712 -137346576 + Charlie1 DNA MER1_type 2057 2365 -396 971 123 52 110 chr10 8242716 8242759 -137346529 + Charlie1 DNA MER1_type 2472 2516 -245 771 175 0 0 chr10 8242759 8242885 -137346403 + FLAM_A SINE Alu 1 126 -7 971 123 52 110 chr10 8242885 8243035 -137346253 + Charlie1 DNA MER1_type 2516 2643 -118 1977 147 13 3 chr10 8243035 8243342 -137345946 - AluSx SINE Alu -2 310 1 971 123 52 110 chr10 8243342 8243455 -137345833 + Charlie1 DNA MER1_type 2643 2761 0 685 292 69 21 chr10 8243479 8243941 -137345347 - L1MEd LINE L1 -4706 1604 1082 242 255 0 31 chr10 8243986 8244084 -137345204 - L1MEd LINE L1 -5150 982 888 399 293 87 45 chr10 8244146 8244388 -137344900 - L1MEd LINE L1 -5264 855 604 744 273 32 67 chr10 8244854 8245042 -137344246 + MIR SINE MIR 1 179 -83 2235 108 0 7 chr10 8245042 8245174 -137344114 + AluSp SINE Alu 1 132 -181 405 0 0 0 chr10 8245174 8245219 -137344069 + (CA)n Simple_repeat Simple_repeat 2 46 0 2235 108 0 7 chr10 8245219 8245383 -137343905 + AluSp SINE Alu 132 295 -18 744 273 32 67 chr10 8245383 8245447 -137343841 + MIR SINE MIR 179 244 -18 246 338 27 0 chr10 8245422 8245496 -137343792 + L2 LINE L2 3186 3261 -11 * 397 326 39 26 chr10 8246139 8246388 -137342900 + L1ME3A LINE L1 5750 5952 -218 432 0 0 0 chr10 8246557 8246605 -137342683 + (TA)n Simple_repeat Simple_repeat 1 48 0 441 316 124 5 chr10 8246628 8246846 -137342442 + MIR SINE MIR 18 261 -1 214 290 75 21 chr10 8246849 8246942 -137342346 - MIR SINE MIR -152 110 13 2337 98 0 7 chr10 8247087 8247393 -137341895 - AluSx SINE Alu -8 304 1 301 279 91 13 chr10 8247556 8247710 -137341578 - MLT1I LTR MaLR -14 395 230 314 301 78 50 chr10 8248086 8248305 -137340983 + L1M2 LINE L1 734 958 -5891 864 166 7 7 chr10 8248448 8248599 -137340689 - FRAM SINE Alu -25 151 1 2335 91 10 3 chr10 8248607 8248914 -137340374 - AluSq SINE Alu -4 309 1 1637 181 21 3 chr10 8248914 8249201 -137340087 - AluJb SINE Alu -19 293 1 2200 104 7 10 chr10 8249619 8249917 -137339371 + AluSq SINE Alu 1 297 -16 1603 158 9 70 chr10 8250238 8250570 -137338718 - AluJo SINE Alu -2 310 1 238 253 11 53 chr10 8250713 8250808 -137338480 + MIR3 SINE MIR 103 193 -15 1777 168 3 13 chr10 8250890 8251199 -137338089 + AluJb SINE Alu 1 306 -6 223 315 157 22 chr10 8251289 8251423 -137337865 + MIR SINE MIR 64 214 -48 23 68 0 0 chr10 8254514 8254558 -137334730 + AT_rich Low_complexity Low_complexity 1 44 0 180 298 107 12 chr10 8254589 8254673 -137334615 - L3 LINE CR1 -902 675 584 21 36 0 0 chr10 8255075 8255103 -137334185 + AT_rich Low_complexity Low_complexity 1 28 0 366 170 0 0 chr10 8258281 8258357 -137330931 - AluJb SINE Alu 0 305 230 853 172 86 6 chr10 8258359 8258533 -137330755 - AluJb SINE Alu -124 188 1 1950 119 3 17 chr10 8258543 8258845 -137330443 - AluSx SINE Alu -14 298 1 2421 55 6 6 chr10 8258989 8259300 -137329988 - AluY SINE Alu 0 311 1 201 326 47 23 chr10 8259307 8259393 -137329895 - L2 LINE L2 0 3272 3185 2313 91 0 0 chr10 8259597 8259894 -137329394 + AluSq SINE Alu 1 297 -16 1579 158 21 32 chr10 8260201 8260508 -137328780 + AluJo SINE Alu 1 304 0 2105 109 17 3 chr10 8260509 8260811 -137328477 + AluSc SINE Alu 1 306 -3 951 85 23 0 chr10 8260833 8260963 -137328325 - AluSq/x SINE Alu -179 133 1 186 43 0 0 chr10 8261717 8261740 -137327548 + (TA)n Simple_repeat Simple_repeat 1 23 0 2000 104 4 4 chr10 8261742 8262020 -137327268 - AluSc SINE Alu -31 278 1 846 189 19 61 chr10 8262064 8262221 -137327067 + MER3 DNA MER1_type 5 152 -57 1552 193 0 37 chr10 8262221 8262543 -137326745 - AluJo SINE Alu -2 310 1 846 189 19 61 chr10 8262543 8262597 -137326691 + MER3 DNA MER1_type 152 207 -2 2283 81 0 28 chr10 8263279 8263631 -137325657 + AluY SINE Alu 1 343 0 1780 151 14 3 chr10 8263645 8263936 -137325352 + AluJo SINE Alu 5 298 -14 180 0 0 0 chr10 8265001 8265021 -137324267 + (TA)n Simple_repeat Simple_repeat 1 20 0 2199 102 3 7 chr10 8265022 8265326 -137323962 - AluSx SINE Alu -9 303 1 1247 122 0 0 chr10 8266446 8266626 -137322662 - AluSg/x SINE Alu -5 305 126 213 39 0 0 chr10 8266636 8266662 -137322626 + (CA)n Simple_repeat Simple_repeat 2 27 0 2154 86 0 58 chr10 8266739 8267066 -137322222 + AluY SINE Alu 1 308 -3 2331 86 0 0 chr10 8267066 8267367 -137321921 + AluSq SINE Alu 1 301 -12 425 197 0 0 chr10 8267661 8267732 -137321556 - AluS SINE Alu -241 72 2 2212 105 0 22 chr10 8267774 8267910 -137321378 + AluSx SINE Alu 1 139 -173 2211 82 0 0 chr10 8267910 8268229 -137321059 + AluSg SINE Alu 1 319 0 2212 105 0 22 chr10 8268229 8268404 -137320884 + AluSx SINE Alu 139 306 -6 1738 170 7 0 chr10 8268704 8269004 -137320284 + AluJb SINE Alu 1 302 -10 1810 168 3 0 chr10 8269770 8270061 -137319227 - AluJo SINE Alu -20 292 1 234 192 77 0 chr10 8270852 8270871 -137318417 + AluSg/x SINE Alu 115 137 -165 288 105 0 0 chr10 8270871 8270909 -137318379 + Alu SINE Alu 3 40 -260 239 150 25 0 chr10 8271074 8271114 -137318174 + Alu SINE Alu 1 41 -262 1432 150 70 42 chr10 8271240 8271526 -137317762 + AluJo SINE Alu 1 294 -18 2008 102 74 0 chr10 8271633 8271917 -137317371 + AluSp SINE Alu 1 305 -8 320 310 124 8 chr10 8275379 8275508 -137313780 - MIR3 SINE MIR -29 179 36 254 231 15 31 chr10 8276068 8276133 -137313155 + CT-rich Low_complexity Low_complexity 1 64 0 24 0 0 0 chr10 8276255 8276279 -137313009 + GC_rich Low_complexity Low_complexity 1 24 0 218 229 49 33 chr10 8277376 8277437 -137311851 + polypurine Low_complexity Low_complexity 3 64 0 204 40 0 0 chr10 8278659 8278684 -137310604 + (TA)n Simple_repeat Simple_repeat 1 25 0 351 0 0 0 chr10 8278684 8278723 -137310565 + (CA)n Simple_repeat Simple_repeat 2 40 0 387 0 0 0 chr10 8285206 8285249 -137304039 + (TG)n Simple_repeat Simple_repeat 1 43 0 221 159 0 23 chr10 8287487 8287531 -137301757 + G-rich Low_complexity Low_complexity 6 48 0 249 219 0 0 chr10 8287637 8287710 -137301578 + A-rich Low_complexity Low_complexity 1 73 0 21 36 0 0 chr10 8288537 8288565 -137300723 + GC_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr10 8289472 8289494 -137299794 + GC_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr10 8290056 8290085 -137299203 + GC_rich Low_complexity Low_complexity 1 29 0 24 77 0 0 chr10 8292990 8293042 -137296246 + GC_rich Low_complexity Low_complexity 1 52 0 291 164 0 0 chr10 8293322 8293383 -137295905 + GA-rich Low_complexity Low_complexity 1 61 0 216 0 0 0 chr10 8299625 8299649 -137289639 + (TC)n Simple_repeat Simple_repeat 2 25 0 23 0 0 0 chr10 8300919 8300942 -137288346 + AT_rich Low_complexity Low_complexity 1 23 0 351 150 0 0 chr10 8302827 8302887 -137286401 + (T)n Simple_repeat Simple_repeat 1 60 0 2228 97 3 0 chr10 8303807 8304115 -137285173 - AluSx SINE Alu -3 309 1 228 67 0 0 chr10 8304259 8304289 -137284999 + (T)n Simple_repeat Simple_repeat 1 30 0 222 220 0 0 chr10 8304521 8304580 -137284708 + A-rich Low_complexity Low_complexity 1 59 0 237 65 0 0 chr10 8304989 8305020 -137284268 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 2393 61 3 3 chr10 8306095 8306406 -137282882 + AluY SINE Alu 1 311 0 2068 109 0 3 chr10 8307036 8307330 -137281958 + AluSx SINE Alu 9 301 -11 300 279 30 79 chr10 8309646 8309811 -137279477 - MIR SINE MIR -46 216 60 2382 75 0 0 chr10 8311423 8311729 -137277559 + AluSg SINE Alu 1 306 -4 180 77 0 0 chr10 8312256 8312282 -137277006 + (A)n Simple_repeat Simple_repeat 1 26 0 282 143 0 0 chr10 8313055 8313104 -137276184 + (A)n Simple_repeat Simple_repeat 1 49 0 25 0 0 0 chr10 8314791 8314816 -137274472 + AT_rich Low_complexity Low_complexity 1 25 0 2255 93 0 0 chr10 8314831 8315133 -137274155 - AluSx SINE Alu -10 302 1 24 0 0 0 chr10 8315579 8315603 -137273685 + AT_rich Low_complexity Low_complexity 1 24 0 2221 109 0 3 chr10 8315815 8316127 -137273161 - AluSx SINE Alu -1 311 1 246 379 76 8 chr10 8316812 8316944 -137272344 + MIR3 SINE MIR 33 173 -35 2098 128 0 3 chr10 8317015 8317320 -137271968 - AluSx SINE Alu -8 304 1 2147 112 3 0 chr10 8317386 8317691 -137271597 + AluSx SINE Alu 1 306 -6 180 0 0 0 chr10 8317981 8318001 -137271287 + (T)n Simple_repeat Simple_repeat 1 20 0 1930 118 0 0 chr10 8318761 8319033 -137270255 + AluSx SINE Alu 11 282 -30 339 44 0 0 chr10 8319036 8319081 -137270207 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 309 353 25 0 chr10 8319999 8320121 -137269167 - MIR SINE MIR -45 217 93 187 330 45 36 chr10 8320130 8320242 -137269046 + L2 LINE L2 3201 3313 0 892 221 96 12 chr10 8320624 8320864 -137268424 - MLT1D LTR MaLR -39 466 207 2457 65 0 0 chr10 8321495 8321805 -137267483 + AluY SINE Alu 1 310 -1 2154 111 10 0 chr10 8322871 8323178 -137266110 + AluSx SINE Alu 1 310 -2 1495 159 8 8 chr10 8324085 8324343 -137264945 - AluJb SINE Alu -54 258 1 2278 100 0 0 chr10 8324444 8324784 -137264504 + AluSc SINE Alu 1 340 0 504 198 159 32 chr10 8325400 8325526 -137263762 - MIR SINE MIR -19 243 102 1933 116 0 10 chr10 8325591 8325883 -137263405 - AluSx SINE Alu -1 311 23 988 153 47 0 chr10 8326168 8326338 -137262950 - AluJo SINE Alu -131 181 4 2122 107 0 0 chr10 8326577 8326867 -137262421 + AluSc SINE Alu 2 291 -18 1721 142 0 37 chr10 8326879 8327202 -137262086 + AluJo SINE Alu 1 311 -1 28 29 0 0 chr10 8327757 8327792 -137261496 + AT_rich Low_complexity Low_complexity 1 35 0 1753 150 0 32 chr10 8327792 8328105 -137261183 + AluSx SINE Alu 1 303 -9 1492 166 7 25 chr10 8328124 8328401 -137260887 - AluJo SINE Alu -40 272 1 1814 62 25 16 chr10 8328783 8329027 -137260261 - L1PA10 LINE L1 -3 6165 5920 21 0 0 0 chr10 8329063 8329084 -137260204 + AT_rich Low_complexity Low_complexity 1 21 0 1436 196 13 16 chr10 8329679 8329985 -137259303 + AluJo SINE Alu 1 305 -7 2136 92 0 0 chr10 8330250 8330533 -137258755 - AluSg SINE Alu -27 283 1 382 298 0 0 chr10 8331482 8331576 -137257712 + MIR SINE MIR 169 262 0 879 105 0 53 chr10 8331591 8331724 -137257564 + FLAM_C SINE Alu 2 127 -6 1208 154 112 63 chr10 8331762 8332048 -137257240 + AluSp SINE Alu 1 300 -3 278 139 23 0 chr10 8332050 8332093 -137257195 + AluJ/F(R)AM SINE Alu 168 211 -91 1223 110 0 16 chr10 8332125 8332307 -137256981 + AluSg/x SINE Alu 134 312 0 2006 132 0 0 chr10 8333259 8333547 -137255741 + AluSx SINE Alu 1 288 -24 778 149 0 22 chr10 8333680 8333814 -137255474 + FLAM_C SINE Alu 1 131 -2 28 0 0 0 chr10 8334927 8334955 -137254333 + AT_rich Low_complexity Low_complexity 1 28 0 1871 126 0 4 chr10 8334957 8335235 -137254053 + AluSx SINE Alu 3 279 -33 1322 154 14 0 chr10 8335266 8335480 -137253808 + AluSg/x SINE Alu 86 302 -10 218 310 42 0 chr10 8335543 8335614 -137253674 + MIR SINE MIR 111 184 -78 227 167 368 53 chr10 8335682 8335796 -137253492 + L2 LINE L2 3164 3313 0 396 246 70 91 chr10 8335808 8336007 -137253281 - MIR SINE MIR -4 258 64 285 212 273 0 chr10 8336819 8336918 -137252370 + L1ME4a LINE L1 5996 6121 0 405 0 0 0 chr10 8337076 8337121 -137252167 + (CCAA)n Simple_repeat Simple_repeat 2 46 0 2005 128 3 0 chr10 8337200 8337497 -137251791 - AluSx SINE Alu -14 298 1 263 94 0 19 chr10 8337503 8337556 -137251732 + (TTTA)n Simple_repeat Simple_repeat 1 52 0 1565 179 14 10 chr10 8337558 8337854 -137251434 - AluJb SINE Alu -15 297 1 25 31 0 0 chr10 8338078 8338110 -137251178 + AT_rich Low_complexity Low_complexity 1 32 0 704 50 0 40 chr10 8338481 8338581 -137250707 + L1PA5 LINE L1 6059 6154 0 235 384 47 6 chr10 8338871 8339043 -137250245 + MIR3 SINE MIR 28 206 -2 207 217 43 0 chr10 8339416 8339462 -137249826 + MIR SINE MIR 96 143 -65 1886 135 0 42 chr10 8339524 8339836 -137249452 - AluSg SINE Alu -11 299 1 2093 101 0 0 chr10 8340810 8341096 -137248192 - AluSg SINE Alu -4 306 21 1493 167 27 38 chr10 8341137 8341430 -137247858 + AluJb SINE Alu 1 290 -22 2753 151 11 6 chr10 8344369 8344845 -137244443 - L1PA15 LINE L1 0 6165 5688 668 301 51 9 chr10 8344845 8345061 -137244227 + MIR SINE MIR 23 247 -15 335 317 18 41 chr10 8345394 8345615 -137243673 - HAL1 LINE L1 0 2507 2292 882 182 17 17 chr10 8345645 8345826 -137243462 + MER53 DNA DNA 1 181 -8 600 231 88 6 chr10 8345827 8345987 -137243301 - FAM SINE Alu -2 173 1 33 69 0 30 chr10 8346894 8346927 -137242361 + AT_rich Low_complexity Low_complexity 1 33 -65 2181 67 3 20 chr10 8346927 8347224 -137242064 - AluY SINE Alu -19 292 1 33 69 0 30 chr10 8347224 8347291 -137241997 + AT_rich Low_complexity Low_complexity 33 98 0 1733 140 13 33 chr10 8347495 8347802 -137241486 - AluJo SINE Alu -11 301 1 1917 116 0 41 chr10 8348732 8349057 -137240231 + AluSx SINE Alu 1 313 0 364 289 159 15 chr10 8349269 8349470 -137239818 + MIR SINE MIR 9 238 -24 797 146 8 0 chr10 8350059 8350189 -137239099 + AluSg/x SINE Alu 182 312 0 513 0 0 0 chr10 8350467 8350524 -137238764 + (TTTA)n Simple_repeat Simple_repeat 3 59 0 1655 156 0 32 chr10 8350530 8350813 -137238475 - AluJo SINE Alu -38 274 1 228 122 0 0 chr10 8351446 8351487 -137237801 + (CA)n Simple_repeat Simple_repeat 1 41 0 314 234 317 0 chr10 8351669 8351814 -137237474 - MIR SINE MIR -61 201 11 340 354 48 7 chr10 8351821 8351968 -137237320 - MIR3 SINE MIR -33 175 23 1086 146 6 0 chr10 8352719 8352884 -137236404 - AluJb SINE Alu -11 301 136 542 285 85 10 chr10 8353243 8353444 -137235844 - MIR SINE MIR -13 249 33 1708 184 3 3 chr10 8353915 8354208 -137235080 + AluJo SINE Alu 1 293 -19 2060 132 0 3 chr10 8354210 8354498 -137234790 + AluSg SINE Alu 1 287 -23 198 118 0 0 chr10 8354511 8354545 -137234743 + (CAAAAA)n Simple_repeat Simple_repeat 4 37 0 314 298 40 8 chr10 8354554 8354678 -137234610 - MIR3 SINE MIR -15 193 66 1896 152 20 3 chr10 8355541 8355837 -137233451 - AluJb SINE Alu -11 301 1 1279 160 55 108 chr10 8355885 8355973 -137233315 + AluJb SINE Alu 1 92 -220 2724 46 0 0 chr10 8355973 8356279 -137233009 + AluY SINE Alu 1 306 -5 1279 160 55 108 chr10 8356279 8356515 -137232773 + AluJb SINE Alu 92 308 -4 240 86 0 0 chr10 8357043 8357078 -137232210 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 630 226 0 0 chr10 8357081 8357196 -137232092 - AluJb SINE Alu -196 116 2 2462 72 0 13 chr10 8358248 8358552 -137230736 - AluSp SINE Alu -13 300 1 23 0 0 0 chr10 8358690 8358713 -137230575 + AT_rich Low_complexity Low_complexity 1 23 0 691 190 0 0 chr10 8358809 8358925 -137230363 + FRAM SINE Alu 41 156 -20 277 346 155 30 chr10 8359388 8359717 -137229571 + L2 LINE L2 2397 2766 -548 1754 152 24 14 chr10 8359922 8360218 -137229070 - AluJo SINE Alu -13 299 1 242 239 0 0 chr10 8360291 8360337 -137228951 + L2 LINE L2 3137 3182 -90 844 86 44 15 chr10 8360967 8361386 -137227902 + (TCTA)n Simple_repeat Simple_repeat 1 431 0 455 192 0 0 chr10 8361386 8361464 -137227824 - FLAM_A SINE Alu -25 117 40 2212 113 0 0 chr10 8361885 8362177 -137227111 - AluSx SINE Alu -9 303 12 1584 161 73 11 chr10 8362366 8362690 -137226598 + AluJb SINE Alu 1 312 0 200 315 76 0 chr10 8363808 8363900 -137225388 - L2 LINE L2 -860 2454 2356 1190 96 11 0 chr10 8363915 8364093 -137225195 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1606 160 30 11 chr10 8364108 8364377 -137224911 - AluSx SINE Alu -38 274 1 1002 192 12 0 chr10 8364380 8364552 -137224736 - FAM SINE Alu -1 174 1 369 232 238 11 chr10 8364552 8364737 -137224551 - L2 LINE L2 -950 2364 2138 808 126 0 44 chr10 8365294 8365429 -137223859 - FLAM_C SINE Alu 0 133 5 1621 168 8 0 chr10 8365962 8366224 -137223064 + AluJo SINE Alu 27 290 -22 250 287 0 25 chr10 8366830 8366930 -137222358 - MIR SINE MIR -62 146 63 198 274 62 26 chr10 8368096 8368209 -137221079 + MIR SINE MIR 90 206 -56 324 301 29 0 chr10 8368253 8368356 -137220932 + MIR SINE MIR 131 236 -26 2078 137 7 10 chr10 8368734 8369040 -137220248 - AluJb SINE Alu -7 305 1 359 237 43 21 chr10 8369078 8369171 -137220117 + L2 LINE L2 3197 3291 -22 444 106 77 135 chr10 8370011 8370061 -137219227 + HY3 scRNA scRNA 1 43 -58 1951 154 3 10 chr10 8370061 8370372 -137218916 - AluJo SINE Alu -3 309 1 444 106 77 135 chr10 8370372 8370425 -137218863 + HY3 scRNA scRNA 43 98 -3 2024 155 30 0 chr10 8370529 8370832 -137218456 - AluSx SINE Alu 0 312 1 260 227 41 21 chr10 8371115 8371212 -137218076 + CT-rich Low_complexity Low_complexity 4 102 0 312 273 132 34 chr10 8372235 8372440 -137216848 - MER112 DNA MER1_type -23 237 13 402 253 156 21 chr10 8372595 8372832 -137216456 - L1ME4a LINE L1 -1 6120 5852 2409 97 0 0 chr10 8372872 8373183 -137216105 + AluSq SINE Alu 1 311 -2 1593 149 31 35 chr10 8373510 8373771 -137215517 - AluJo SINE Alu -50 262 3 1986 144 0 20 chr10 8373932 8374237 -137215051 - AluSx SINE Alu -13 299 1 225 278 31 10 chr10 8375743 8375840 -137213448 + GA-rich Low_complexity Low_complexity 5 103 0 255 236 0 0 chr10 8376128 8376200 -137213088 + (CA)n Simple_repeat Simple_repeat 2 73 0 2199 116 0 6 chr10 8376210 8376521 -137212767 - AluSx SINE Alu -3 309 1 332 291 10 65 chr10 8377607 8377667 -137211621 - MER5A DNA MER1_type -1 188 126 1793 150 3 52 chr10 8377667 8377974 -137211314 + AluJo SINE Alu 1 292 -20 332 291 10 65 chr10 8377974 8378112 -137211176 - MER5A DNA MER1_type -63 126 1 209 33 33 0 chr10 8379700 8379730 -137209558 + (CCCCCA)n Simple_repeat Simple_repeat 6 36 0 189 0 0 0 chr10 8379789 8379810 -137209478 + (T)n Simple_repeat Simple_repeat 1 21 0 21 0 0 0 chr10 8380180 8380201 -137209087 + AT_rich Low_complexity Low_complexity 1 21 0 1555 201 32 0 chr10 8380509 8380792 -137208496 - AluJb SINE Alu -18 294 3 376 306 25 0 chr10 8383619 8383740 -137205548 + MIR SINE MIR 28 151 -111 707 77 0 0 chr10 8383747 8383838 -137205450 - AluY SINE Alu -16 295 205 271 260 31 10 chr10 8383843 8383939 -137205349 + MIR SINE MIR 150 247 -15 635 277 54 0 chr10 8384450 8384634 -137204654 + MIR SINE MIR 59 252 -10 415 188 77 60 chr10 8385203 8385320 -137203968 - HAL1 LINE L1 0 2507 2389 709 143 36 0 chr10 8385328 8385440 -137203848 - FLAM_A SINE Alu -11 131 16 961 248 134 50 chr10 8385441 8385812 -137203476 - HAL1 LINE L1 -127 2380 2042 2182 130 0 13 chr10 8385812 8386128 -137203160 + AluSx SINE Alu 1 312 0 961 248 134 50 chr10 8386128 8386396 -137202892 - HAL1 LINE L1 -465 2042 1687 703 212 53 11 chr10 8386393 8386582 -137202706 - HAL1 LINE L1 -1042 1465 1269 * 461 167 8 92 chr10 8386585 8386705 -137202583 - FRAM SINE Alu -7 169 60 278 282 76 13 chr10 8386984 8387120 -137202168 - MIR3 SINE MIR -14 194 51 1987 135 0 44 chr10 8387276 8387594 -137201694 + AluJo SINE Alu 1 304 -8 771 169 7 54 chr10 8387643 8387791 -137201497 + FLAM_C SINE Alu 2 142 -1 731 191 5 53 chr10 8388799 8388987 -137200301 - MER53 DNA DNA 0 189 11 30 0 0 0 chr10 8389116 8389146 -137200142 + AT_rich Low_complexity Low_complexity 1 30 0 686 203 16 0 chr10 8389146 8389269 -137200019 - FLAM_C SINE Alu -17 126 2 979 178 0 0 chr10 8389461 8389613 -137199675 + FRAM SINE Alu 5 156 -10 284 313 0 0 chr10 8389881 8389945 -137199343 + (CACG)n Simple_repeat Simple_repeat 4 67 0 240 86 0 0 chr10 8389946 8389981 -137199307 + (TC)n Simple_repeat Simple_repeat 1 35 0 524 320 50 11 chr10 8390653 8390934 -137198354 + L1ME4a LINE L1 5625 5916 -205 319 254 66 16 chr10 8391062 8391184 -137198104 + L1ME4a LINE L1 5985 6112 -9 1314 107 11 0 chr10 8391451 8391628 -137197660 + AluSq SINE Alu 1 179 -134 388 133 0 0 chr10 8391628 8391688 -137197600 - AluS SINE Alu -243 60 1 2275 78 10 0 chr10 8392291 8392585 -137196703 - AluY SINE Alu -14 297 1 2331 106 3 0 chr10 8392804 8393106 -137196182 + AluSx SINE Alu 1 303 -9 2228 105 0 3 chr10 8393292 8393587 -137195701 + AluSg SINE Alu 8 301 -9 993 172 0 22 chr10 8393608 8393788 -137195500 - L1MC1 LINE L1 -190 6143 5968 887 114 0 0 chr10 8393788 8393902 -137195386 - AluJo SINE Alu -20 292 179 762 185 8 0 chr10 8393902 8394032 -137195256 - AluJo SINE Alu -180 132 2 4087 153 3 16 chr10 8394034 8394727 -137194561 - L1MC1 LINE L1 -358 5975 5292 862 146 8 0 chr10 8395668 8395798 -137193490 - FLAM_C SINE Alu -2 131 1 216 0 0 0 chr10 8396184 8396208 -137193080 + (TTTAA)n Simple_repeat Simple_repeat 5 28 0 1774 54 27 0 chr10 8396208 8396429 -137192859 - L1PA10 LINE L1 -22 6146 5920 21 0 0 0 chr10 8396465 8396486 -137192802 + AT_rich Low_complexity Low_complexity 1 21 0 1527 196 13 16 chr10 8397081 8397387 -137191901 + AluJo SINE Alu 1 305 -7 2263 92 0 0 chr10 8397652 8397935 -137191353 - AluSg SINE Alu -27 283 1 801 115 0 54 chr10 8398995 8399125 -137190163 + FLAM_C SINE Alu 5 127 -6 1163 155 116 60 chr10 8399163 8399447 -137189841 + AluSp SINE Alu 1 300 -3 276 139 23 0 chr10 8399449 8399492 -137189796 + AluJ/F(R)AM SINE Alu 168 211 -91 1336 96 0 0 chr10 8399524 8399691 -137189597 + AluSg/x SINE Alu 132 298 -12 391 159 0 0 chr10 8400718 8400787 -137188501 - L1M LINE L1 -984 5360 5292 199 191 95 0 chr10 8401791 8401833 -137187455 + L2 LINE L2 3175 3220 -52 265 174 0 0 chr10 8402107 8402153 -137187135 - L1MC/D LINE L1 -1934 5851 5806 237 133 61 20 chr10 8402160 8402258 -137187030 + (TCTA)n Simple_repeat Simple_repeat 1 102 0 507 252 35 0 chr10 8402535 8402650 -137186638 + LTR67 LTR ERVL 399 517 -40 2560 118 74 22 chr10 8404275 8404682 -137184606 - MSTA LTR MaLR 0 428 1 270 0 0 0 chr10 8405232 8405262 -137184026 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 2142 111 40 7 chr10 8407110 8407408 -137181880 - AluSc SINE Alu -1 308 1 3887 76 38 0 chr10 8408753 8409253 -137180035 + L1PA13 LINE L1 5642 6160 -3 1112 257 40 81 chr10 8409333 8409516 -137179772 + L2 LINE L2 1997 2186 -1128 2186 131 0 0 chr10 8409516 8409814 -137179474 - AluSx SINE Alu -14 298 1 1112 257 40 81 chr10 8409814 8410101 -137179187 + L2 LINE L2 2186 2448 -866 959 276 99 14 chr10 8410104 8410456 -137178832 + L2 LINE L2 2238 2619 -695 1740 146 46 4 chr10 8410527 8410807 -137178481 - AluJb SINE Alu -20 292 1 478 319 13 4 chr10 8410832 8411064 -137178224 - L1M4 LINE L1 -943 5186 4953 * 1218 288 59 48 chr10 8411060 8411699 -137177589 - L1MEd LINE L1 -3270 2859 2225 2303 140 28 8 chr10 8411699 8412056 -137177232 - THE1B LTR MaLR 0 364 1 1218 288 59 48 chr10 8412056 8412254 -137177034 - L1MEd LINE L1 -3904 2225 2031 935 254 68 66 chr10 8412509 8413519 -137175769 - L1MEd LINE L1 -4646 1664 604 221 172 16 0 chr10 8414002 8414066 -137175222 + (TA)n Simple_repeat Simple_repeat 1 65 0 261 0 0 0 chr10 8414071 8414100 -137175188 + (TG)n Simple_repeat Simple_repeat 2 30 0 245 276 63 87 chr10 8414179 8414306 -137174982 - L2 LINE L2 -15 3257 3134 1816 168 3 3 chr10 8414323 8414615 -137174673 - AluJo SINE Alu -20 292 1 345 129 0 0 chr10 8414977 8415047 -137174241 + (TG)n Simple_repeat Simple_repeat 1 70 0 1152 247 57 46 chr10 8415047 8415436 -137173852 - MLT2C2 LTR ERVL -71 393 1 1054 164 0 23 chr10 8415697 8415868 -137173420 + AluJb SINE Alu 121 287 -25 213 39 0 0 chr10 8415873 8415899 -137173389 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 876 195 197 82 chr10 8416026 8416506 -137172782 + MLT1F1 LTR MaLR 1 565 -2 407 240 0 8 chr10 8416843 8416951 -137172337 + (CA)n Simple_repeat Simple_repeat 2 110 -11 1858 157 7 7 chr10 8416951 8417245 -137172043 - AluSx SINE Alu -18 294 1 407 240 0 8 chr10 8417245 8417257 -137172031 + (CA)n Simple_repeat Simple_repeat 110 121 0 219 295 66 0 chr10 8417274 8417335 -137171953 - MER91A DNA MER1_type -3 193 129 581 310 38 0 chr10 8417401 8417559 -137171729 - MER91A DNA MER1_type -20 176 13 1722 171 17 0 chr10 8419403 8419696 -137169592 + AluJo SINE Alu 1 298 -14 2000 155 0 10 chr10 8419756 8420066 -137169222 - AluSx SINE Alu -5 307 1 180 77 0 0 chr10 8420092 8420118 -137169170 + (CA)n Simple_repeat Simple_repeat 1 26 0 1850 167 0 7 chr10 8420993 8421293 -137167995 + AluJo SINE Alu 1 298 -14 2178 124 0 0 chr10 8421432 8421731 -137167557 - AluSq SINE Alu -14 299 1 1592 170 12 8 chr10 8421818 8422077 -137167211 - AluJo SINE Alu -52 260 1 198 0 0 0 chr10 8422262 8422284 -137167004 + (TA)n Simple_repeat Simple_repeat 2 23 0 1926 137 0 14 chr10 8422933 8423217 -137166071 + AluSc SINE Alu 1 280 -29 317 361 16 0 chr10 8423396 8423518 -137165770 - MIR3 SINE MIR -38 170 47 1995 92 8 0 chr10 8423678 8423940 -137165348 - L1PA10 LINE L1 -12 6156 5893 5163 71 3 3 chr10 8424263 8424895 -137164393 - L1PA10 LINE L1 -12 6156 5525 350 308 47 35 chr10 8426416 8426588 -137162700 + MIR3 SINE MIR 17 190 -18 290 292 10 10 chr10 8427042 8427138 -137162150 + MER103 DNA DNA 37 132 -34 331 266 105 21 chr10 8427222 8427365 -137161923 + L1M4 LINE L1 5075 5229 -917 361 296 108 11 chr10 8428962 8429138 -137160150 - MIR SINE MIR -23 239 47 2090 94 0 4 chr10 8429143 8429410 -137159878 + AluSx SINE Alu 36 301 -11 340 318 162 1 chr10 8429728 8429887 -137159401 - MIR SINE MIR -70 138 14 248 216 20 0 chr10 8429885 8429936 -137159352 + L2 LINE L2 3262 3313 0 * 1753 179 7 0 chr10 8429976 8430267 -137159021 - AluSx SINE Alu -18 294 2 1901 154 0 7 chr10 8430336 8430634 -137158654 + AluJo SINE Alu 17 312 0 1527 190 30 23 chr10 8431272 8431577 -137157711 - AluJb SINE Alu -5 307 1 258 347 24 45 chr10 8432227 8432371 -137156917 + MIR3 SINE MIR 40 181 -27 253 182 23 0 chr10 8432454 8432498 -137156790 - MER57A LTR ERV1 -64 339 295 216 348 90 23 chr10 8432911 8433210 -137156078 - L2 LINE L2 -340 2974 2656 1066 145 60 20 chr10 8433214 8433247 -137156041 + AluSg/x SINE Alu 86 116 -193 1884 84 0 8 chr10 8433247 8433512 -137155776 + AluSq SINE Alu 51 313 0 1066 145 60 20 chr10 8433512 8433677 -137155611 + AluSg/x SINE Alu 116 293 -16 381 328 85 48 chr10 8433783 8434076 -137155212 - L2 LINE L2 -862 2452 2149 220 312 50 50 chr10 8434439 8434580 -137154708 - L2 LINE L2 -1635 1679 1539 1422 168 45 63 chr10 8434681 8435020 -137154268 + AluJb SINE Alu 1 334 0 743 144 0 0 chr10 8435208 8435312 -137153976 + FRAM SINE Alu 49 152 -24 209 338 54 0 chr10 8435326 8435400 -137153888 - L2 LINE L2 -2 3311 3234 334 321 3 8 chr10 8435532 8435653 -137153635 + MIR SINE MIR 51 170 -62 1956 133 85 20 chr10 8435675 8436027 -137153261 + THE1C LTR MaLR 1 375 0 195 139 0 0 chr10 8436347 8436383 -137152905 + (TTCA)n Simple_repeat Simple_repeat 4 39 0 1786 187 0 13 chr10 8436488 8436804 -137152484 + AluJo SINE Alu 1 312 0 497 272 69 13 chr10 8436968 8437186 -137152102 - MIR SINE MIR -13 249 19 1691 120 0 154 chr10 8437275 8437632 -137151656 - AluJb SINE Alu -10 302 1 757 229 67 48 chr10 8437734 8438048 -137151240 + L1MC5 LINE L1 7631 7950 -11 324 336 49 8 chr10 8438230 8438352 -137150936 + MIR3 SINE MIR 74 200 -8 1729 142 26 8 chr10 8439153 8439450 -137149838 + AluJo SINE Alu 12 313 0 1109 159 17 0 chr10 8439846 8440022 -137149266 - AluJ SINE Alu 0 312 134 2077 118 4 0 chr10 8440022 8440302 -137148986 - AluSx SINE Alu -13 299 19 1824 112 20 58 chr10 8440536 8440857 -137148431 - AluSx SINE Alu 0 310 1 318 167 0 0 chr10 8440875 8440935 -137148353 + CT-rich Low_complexity Low_complexity 2 61 0 904 153 8 0 chr10 8440935 8441066 -137148222 - AluJ SINE Alu -169 133 2 1488 171 3 49 chr10 8441461 8441747 -137147541 - AluJb SINE Alu -39 273 1 26 30 0 0 chr10 8441754 8441787 -137147501 + AT_rich Low_complexity Low_complexity 1 33 0 833 163 8 0 chr10 8441789 8441912 -137147376 - FLAM_C SINE Alu -18 125 2 853 299 68 35 chr10 8442057 8442575 -137146713 + L1ME4a LINE L1 5392 5926 -195 2034 136 7 3 chr10 8442700 8442994 -137146294 + AluSx SINE Alu 1 295 -17 2363 96 3 0 chr10 8443073 8443376 -137145912 + AluSp SINE Alu 1 304 -9 204 274 71 12 chr10 8443655 8443739 -137145549 - MIR SINE MIR -111 151 63 491 164 4 246 chr10 8444257 8444345 -137144943 - MER5A DNA MER1_type -13 176 176 1991 101 19 0 chr10 8444345 8444613 -137144675 - AluSx SINE Alu -18 294 22 491 164 4 246 chr10 8444613 8444756 -137144532 - MER5A DNA MER1_type -12 177 1 211 85 43 0 chr10 8445127 8445174 -137144114 + (TA)n Simple_repeat Simple_repeat 1 49 0 25 0 0 0 chr10 8445174 8445199 -137144089 + AT_rich Low_complexity Low_complexity 1 25 0 204 314 0 0 chr10 8445579 8445630 -137143658 + L3 LINE CR1 1516 1566 -11 2193 109 0 3 chr10 8445689 8445983 -137143305 + AluSq SINE Alu 5 297 -16 21 0 0 0 chr10 8446204 8446225 -137143063 + AT_rich Low_complexity Low_complexity 1 21 0 4698 123 11 32 chr10 8446605 8446863 -137142425 - L1PB4 LINE L1 0 6156 5894 2102 133 0 0 chr10 8446863 8447157 -137142131 - AluY SINE Alu -17 294 1 4698 123 11 32 chr10 8447157 8447680 -137141608 - L1PB4 LINE L1 -262 5894 5391 260 307 23 0 chr10 8448098 8448186 -137141102 + GA-rich Low_complexity Low_complexity 1 90 0 22 0 0 0 chr10 8448609 8448631 -137140657 + AT_rich Low_complexity Low_complexity 1 22 0 1603 205 0 7 chr10 8448747 8449049 -137140239 + AluJo SINE Alu 2 301 -11 1975 137 13 10 chr10 8449920 8450227 -137139061 + AluSx SINE Alu 5 312 0 222 218 0 0 chr10 8450252 8450307 -137138981 + A-rich Low_complexity Low_complexity 1 55 0 766 156 0 71 chr10 8450603 8450744 -137138544 + FLAM_C SINE Alu 1 131 -2 1337 198 41 36 chr10 8450801 8451250 -137138038 - Charlie1b DNA MER1_type 0 523 1 2449 88 0 0 chr10 8452031 8452336 -137136952 - AluSc SINE Alu -4 305 1 287 318 86 75 chr10 8452702 8452982 -137136306 - L2 LINE L2 -5 3267 2985 446 279 89 26 chr10 8453049 8453239 -137136049 - MLT1K LTR MaLR -9 579 378 875 201 0 0 chr10 8455074 8455223 -137134065 - FRAM SINE Alu -26 150 2 624 266 110 17 chr10 8455227 8455464 -137133824 + MER112 DNA MER1_type 1 259 -1 1197 147 0 26 chr10 8456173 8456363 -137132925 + AluJo SINE Alu 84 268 -44 240 287 50 88 chr10 8456570 8456664 -137132624 + MLT1L LTR MaLR 367 452 -163 1712 181 0 10 chr10 8456664 8456957 -137132331 + AluJo SINE Alu 5 294 -18 240 287 50 88 chr10 8456957 8457043 -137132245 + MLT1L LTR MaLR 452 540 -75 483 173 0 0 chr10 8457068 8457178 -137132110 + CT-rich Low_complexity Low_complexity 2 111 0 1847 126 69 0 chr10 8457178 8457440 -137131848 - AluSx SINE Alu -32 280 1 1969 155 7 3 chr10 8457974 8458284 -137131004 - AluJo SINE Alu -1 311 1 823 174 83 53 chr10 8458515 8458662 -137130626 - MER33 DNA MER1_type -2261 324 163 1832 166 0 4 chr10 8458662 8458962 -137130326 + AluSx SINE Alu 9 307 0 823 174 83 53 chr10 8458962 8459077 -137130211 - MER33 DNA MER1_type -2422 163 53 281 85 34 0 chr10 8459415 8459650 -137129638 + CT-rich Low_complexity Low_complexity 1 180 0 1945 157 3 25 chr10 8459650 8459969 -137129319 - AluSq SINE Alu 0 547 1 213 232 189 63 chr10 8459981 8460076 -137129212 + MIR SINE MIR 74 180 -82 186 233 123 55 chr10 8460104 8460177 -137129111 + L2 LINE L2 3129 3206 -66 909 46 0 0 chr10 8461023 8461131 -137128157 + L1MA1 LINE L1 6195 6302 0 189 0 81 27 chr10 8461179 8461216 -137128072 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 3135 60 34 0 chr10 8461216 8461597 -137127691 - L1PA8 LINE L1 -17 6155 5762 907 142 7 13 chr10 8461604 8461759 -137127529 + L1MA9 LINE L1 6159 6312 0 364 268 121 19 chr10 8462366 8462523 -137126765 - MIR SINE MIR -67 195 23 272 293 24 12 chr10 8462661 8462743 -137126545 + L2 LINE L2 3227 3309 -4 1611 183 23 17 chr10 8462751 8463051 -137126237 + AluJb SINE Alu 11 312 0 217 163 23 0 chr10 8463457 8463500 -137125788 + A-rich Low_complexity Low_complexity 5 48 0 1761 203 7 0 chr10 8463719 8464029 -137125259 + AluJo SINE Alu 1 312 0 2181 124 0 3 chr10 8464280 8464587 -137124701 + AluSq SINE Alu 1 306 -7 285 262 39 29 chr10 8464877 8464980 -137124308 + MIR SINE MIR 73 176 -86 209 270 108 14 chr10 8465078 8465152 -137124136 + MIR SINE MIR 178 258 -4 1627 145 16 4 chr10 8465534 8465789 -137123499 - AluJo SINE Alu -15 297 40 2212 124 0 10 chr10 8466208 8466515 -137122773 - AluSx SINE Alu -8 304 1 357 43 0 0 chr10 8467236 8467283 -137122005 + (CA)n Simple_repeat Simple_repeat 1 47 0 1799 187 0 13 chr10 8469249 8469564 -137119724 - AluJo SINE Alu -1 311 1 353 266 19 19 chr10 8470674 8470835 -137118453 - MIR SINE MIR -63 145 8 220 214 71 18 chr10 8470993 8471049 -137118239 - MIR SINE MIR -96 166 108 2131 139 0 0 chr10 8471304 8471598 -137117690 + AluSx SINE Alu 1 294 -18 868 172 0 0 chr10 8471763 8471891 -137117397 - FLAM_A SINE Alu -5 128 1 1724 179 3 13 chr10 8473030 8473343 -137115945 + AluJo SINE Alu 1 310 -2 1942 173 0 3 chr10 8473377 8473689 -137115599 + AluSx SINE Alu 1 311 -1 534 298 41 1 chr10 8473712 8473881 -137115407 - MIR SINE MIR -31 177 46 230 311 56 0 chr10 8473916 8474006 -137115282 + MIR SINE MIR 168 262 0 23 68 0 0 chr10 8474102 8474146 -137115142 + AT_rich Low_complexity Low_complexity 1 44 0 843 127 8 8 chr10 8474146 8474264 -137115024 - FLAM_C SINE Alu -15 118 1 2247 108 3 0 chr10 8475982 8476287 -137113001 + AluSg1 SINE Alu 1 306 -3 318 328 88 37 chr10 8478698 8479106 -137110182 - L2 LINE L2 -8 3264 2836 268 291 12 0 chr10 8479106 8479192 -137110096 + (CGGGG)n Simple_repeat Simple_repeat 4 90 0 21 36 0 0 chr10 8479542 8479570 -137109718 + AT_rich Low_complexity Low_complexity 1 28 0 342 295 45 0 chr10 8479598 8479710 -137109578 - MIR SINE MIR 0 262 146 1778 170 10 10 chr10 8479751 8480051 -137109237 - AluJo SINE Alu -12 300 1 22 0 0 0 chr10 8481505 8481527 -137107761 + AT_rich Low_complexity Low_complexity 1 22 0 562 223 69 23 chr10 8481758 8481933 -137107355 + MIR SINE MIR 34 216 -46 240 292 167 0 chr10 8482828 8482900 -137106388 + MER5A DNA MER1_type 2 85 -104 1893 143 7 0 chr10 8483343 8483623 -137105665 - AluJo SINE Alu -26 286 5 217 318 16 16 chr10 8484493 8484556 -137104732 - MIR SINE MIR -116 146 84 965 196 4 94 chr10 8484647 8484882 -137104406 - MER20 DNA MER1_type -4 215 2 702 167 25 8 chr10 8484997 8485117 -137104171 + FLAM_A SINE Alu 2 123 -10 345 309 12 0 chr10 8486193 8486355 -137102933 + (TA)n Simple_repeat Simple_repeat 2 165 0 302 313 0 0 chr10 8486363 8486446 -137102842 + L1MC4 LINE L1 6614 6696 -1346 803 143 0 8 chr10 8486446 8486565 -137102723 - FLAM_C SINE Alu -24 119 2 1988 228 49 62 chr10 8486685 8487312 -137101976 - L1ME1 LINE L1 -6 6160 5542 1977 117 46 0 chr10 8487905 8488188 -137101100 - AluSx SINE Alu -15 297 2 188 67 33 0 chr10 8488676 8488706 -137100582 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 915 180 25 0 chr10 8489229 8489390 -137099898 - MER5A DNA MER1_type -24 165 1 260 286 8 92 chr10 8489437 8489493 -137099795 - MIR3 SINE MIR 0 208 166 1193 187 22 40 chr10 8489493 8489718 -137099570 - MER58A DNA MER1_type 0 224 4 260 286 8 92 chr10 8489718 8489780 -137099508 - MIR3 SINE MIR -42 166 100 1191 216 69 79 chr10 8489882 8489895 -137099393 - MLT1F1 LTR MaLR 0 559 547 2378 150 8 35 chr10 8489895 8490296 -137098992 - MLT1B LTR MaLR 0 390 1 1191 216 69 79 chr10 8490296 8490823 -137098465 - MLT1F1 LTR MaLR -12 547 6 717 148 10 0 chr10 8491013 8491114 -137098174 + L1PB4 LINE L1 6039 6140 -16 23 54 0 0 chr10 8491640 8491677 -137097611 + AT_rich Low_complexity Low_complexity 1 37 0 1166 137 103 29 chr10 8491729 8491933 -137097355 + MER20 DNA MER1_type 1 219 0 294 247 132 63 chr10 8492324 8492473 -137096815 - L1ME4a LINE L1 -9 6112 5946 1711 221 152 47 chr10 8492473 8493011 -137096277 + MLT1G1 LTR MaLR 1 595 0 294 247 132 63 chr10 8493011 8493051 -137096237 - L1ME4a LINE L1 -175 5946 5910 290 254 119 51 chr10 8493813 8493931 -137095357 - L2 LINE L2 -1 3312 3187 395 299 160 0 chr10 8494183 8494327 -137094961 + MIR3 SINE MIR 36 202 -6 213 212 53 0 chr10 8494705 8494818 -137094470 + (TA)n Simple_repeat Simple_repeat 1 119 0 255 175 0 0 chr10 8495187 8495244 -137094044 + (TA)n Simple_repeat Simple_repeat 2 58 0 1541 185 58 102 chr10 8496039 8496520 -137092768 + MLT2C2 LTR ERVL 1 460 -4 248 200 31 31 chr10 8496942 8497007 -137092281 + L2 LINE L2 3249 3313 0 490 113 0 72 chr10 8497546 8497740 -137091548 + (TA)n Simple_repeat Simple_repeat 1 180 0 257 208 0 0 chr10 8497742 8497795 -137091493 + GA-rich Low_complexity Low_complexity 1 53 0 1161 68 17 11 chr10 8498460 8498637 -137090651 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 480 208 94 0 chr10 8500537 8500643 -137088645 + MER5A DNA MER1_type 74 189 0 1522 196 0 7 chr10 8500751 8501021 -137088267 - AluJb SINE Alu -44 268 1 700 212 26 36 chr10 8501083 8501276 -137088012 - MLT1J LTR MaLR 0 511 321 875 220 49 52 chr10 8501286 8501734 -137087554 - MLT1D LTR MaLR -6 499 26 679 273 89 25 chr10 8501749 8502075 -137087213 - MLT1J LTR MaLR -164 347 1 1825 158 27 3 chr10 8502282 8502574 -137086714 - AluJo SINE Alu -13 299 1 216 0 0 0 chr10 8502955 8502979 -137086309 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 199 143 29 0 chr10 8503522 8503557 -137085731 - MIR SINE MIR -65 197 162 354 271 69 7 chr10 8504353 8504497 -137084791 - L1ME4a LINE L1 -1 6120 5968 183 271 21 21 chr10 8504675 8504723 -137084565 + L2 LINE L2 3213 3260 -12 398 339 23 28 chr10 8504829 8505006 -137084282 - MIR SINE MIR -74 188 13 3956 127 30 6 chr10 8505490 8506130 -137083158 + L1PA16 LINE L1 5503 6157 -9 279 203 0 0 chr10 8506131 8506195 -137083093 + (TA)n Simple_repeat Simple_repeat 1 64 0 317 286 0 38 chr10 8506206 8506311 -137082977 - L1MC4 LINE L1 -1337 6705 6605 2088 125 7 0 chr10 8506947 8507236 -137082052 + AluSp SINE Alu 14 304 -9 853 263 50 118 chr10 8507740 8508276 -137081012 + L2 LINE L2 2813 3312 -1 21 0 0 0 chr10 8509068 8509089 -137080199 + AT_rich Low_complexity Low_complexity 1 21 0 1656 173 69 0 chr10 8510395 8510730 -137078558 - MER47A DNA MER2_type -1 365 8 2006 125 7 14 chr10 8510953 8511249 -137078039 + AluSx SINE Alu 1 294 -18 320 267 149 37 chr10 8511560 8511721 -137077567 + L2 LINE L2 3122 3300 -13 487 107 82 2 chr10 8511725 8512212 -137077076 + (TA)n Simple_repeat Simple_repeat 1 526 0 34 24 0 0 chr10 8512212 8512253 -137077035 + AT_rich Low_complexity Low_complexity 1 41 0 360 106 93 0 chr10 8512259 8512420 -137076868 + (TA)n Simple_repeat Simple_repeat 1 176 0 37 52 0 0 chr10 8512420 8512478 -137076810 + AT_rich Low_complexity Low_complexity 1 58 0 478 141 0 116 chr10 8512596 8512649 -137076639 - MER33 DNA MER1_type -2476 109 76 2171 127 0 0 chr10 8512649 8512949 -137076339 - AluSx SINE Alu -12 300 1 478 141 0 116 chr10 8512949 8513016 -137076272 - MER33 DNA MER1_type -2509 76 3 1191 26 28 26 chr10 8514286 8514528 -137074760 + (TTTC)n Simple_repeat Simple_repeat 2 423 0 1105 173 0 11 chr10 8514532 8514717 -137074571 - AluSq SINE Alu -13 300 118 245 306 294 8 chr10 8516546 8516791 -137072497 + L3 LINE CR1 1138 1452 -125 262 300 130 63 chr10 8516832 8517179 -137072109 - L2 LINE L2 -36 3236 2867 754 178 0 15 chr10 8517571 8517706 -137071582 - AluJb SINE Alu -179 133 1 22 70 0 0 chr10 8518259 8518302 -137070986 + AT_rich Low_complexity Low_complexity 1 43 0 25 65 0 0 chr10 8518346 8518392 -137070896 + AT_rich Low_complexity Low_complexity 1 46 0 1890 141 21 3 chr10 8519012 8519296 -137069992 + AluJb SINE Alu 1 289 -23 284 91 80 0 chr10 8519296 8519384 -137069904 + (TA)n Simple_repeat Simple_repeat 2 96 0 301 261 57 0 chr10 8519386 8519474 -137069814 - L1MC4 LINE L1 -1337 6705 6613 656 112 49 14 chr10 8519474 8519825 -137069463 + (TA)n Simple_repeat Simple_repeat 1 363 0 391 128 64 6 chr10 8519861 8520017 -137069271 + (TA)n Simple_repeat Simple_repeat 1 165 0 699 132 7 44 chr10 8520138 8520274 -137069014 - LTR9 LTR ERV1 -481 131 1 386 259 175 21 chr10 8521879 8522022 -137067266 - MIR3 SINE MIR -27 181 17 448 130 13 0 chr10 8522204 8522281 -137067007 + MADE1 DNA Mariner 3 80 0 2200 110 0 0 chr10 8522347 8522638 -137066650 - AluSq SINE Alu -18 295 5 556 319 40 22 chr10 8523227 8523453 -137065835 - MIR SINE MIR 0 262 33 835 216 0 55 chr10 8523510 8523728 -137065560 + MER3 DNA MER1_type 2 207 -2 405 176 28 9 chr10 8523868 8523976 -137065312 + GA-rich Low_complexity Low_complexity 4 113 0 2277 108 7 0 chr10 8524192 8524497 -137064791 + AluSx SINE Alu 1 307 -5 186 338 125 22 chr10 8524698 8524834 -137064454 - MIR3 SINE MIR -24 184 35 305 276 243 17 chr10 8526671 8526852 -137062436 + MIR SINE MIR 4 225 -37 234 91 0 0 chr10 8528183 8528216 -137061072 + (T)n Simple_repeat Simple_repeat 1 33 0 448 274 9 9 chr10 8528615 8528721 -137060567 + L2 LINE L2 3208 3313 0 5413 22 5 2 chr10 8529729 8530365 -137058923 + L1PA4 LINE L1 5516 6153 -2 207 167 0 0 chr10 8530688 8530724 -137058564 + (TTG)n Simple_repeat Simple_repeat 1 36 0 2405 76 0 16 chr10 8531161 8531477 -137057811 + AluSx SINE Alu 1 311 -1 195 338 0 25 chr10 8532083 8532163 -137057125 + MIR SINE MIR 65 142 -66 453 81 0 0 chr10 8534157 8534219 -137055069 + (TCCA)n Simple_repeat Simple_repeat 1 62 0 988 272 25 0 chr10 8535315 8535558 -137053730 - MIR SINE MIR -11 251 3 662 249 83 50 chr10 8536013 8536254 -137053034 - MIR SINE MIR -10 252 4 3082 170 45 5 chr10 8536386 8537063 -137052225 - MER39 LTR ERV1 -3 639 1 27 62 0 0 chr10 8537576 8537624 -137051664 + AT_rich Low_complexity Low_complexity 1 48 0 23 0 0 0 chr10 8537712 8537735 -137051553 + AT_rich Low_complexity Low_complexity 1 23 0 201 293 183 0 chr10 8537795 8537877 -137051411 - MER5C DNA MER1_type 0 324 228 183 156 0 0 chr10 8537890 8537922 -137051366 - MER5C DNA MER1_type -201 123 92 346 334 39 55 chr10 8538517 8538825 -137050463 + L1ME4a LINE L1 5582 5884 -237 228 269 182 50 chr10 8539022 8539264 -137050024 + LTR33A LTR ERVL 229 502 -21 302 225 12 0 chr10 8539266 8539346 -137049942 + CT-rich Low_complexity Low_complexity 1 81 0 474 198 32 0 chr10 8539383 8539509 -137049779 + CT-rich Low_complexity Low_complexity 2 131 0 1045 238 13 36 chr10 8539859 8540161 -137049127 + MLT1F LTR MaLR 43 337 -205 1688 171 50 26 chr10 8540188 8540567 -137048721 - MER39 LTR ERV1 -1 706 319 555 56 0 0 chr10 8540814 8540885 -137048403 + (TTCC)n Simple_repeat Simple_repeat 4 74 0 331 169 23 0 chr10 8540913 8540998 -137048290 - MER39 LTR ERV1 -311 358 255 225 0 0 0 chr10 8541013 8541038 -137048250 + (TTCC)n Simple_repeat Simple_repeat 4 28 0 186 71 0 0 chr10 8541080 8541108 -137048180 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 691 127 24 0 chr10 8541109 8541235 -137048053 + CT-rich Low_complexity Low_complexity 4 132 0 228 100 0 0 chr10 8541236 8541276 -137048012 + (TCTCTG)n Simple_repeat Simple_repeat 3 42 0 1797 185 7 0 chr10 8541287 8541579 -137047709 - AluJb SINE Alu -16 296 3 1522 142 83 0 chr10 8541580 8541868 -137047420 - MER39 LTR ERV1 -394 313 2 520 214 7 62 chr10 8541868 8542004 -137047284 + MLT1F LTR MaLR 405 532 -35 892 106 159 33 chr10 8542159 8542310 -137046978 - AluSg/x SINE Alu -7 303 134 2424 73 0 0 chr10 8544306 8544608 -137044680 - AluY SINE Alu -9 302 1 231 341 79 5 chr10 8546495 8546677 -137042611 + MIR3 SINE MIR 12 207 -1 1386 173 11 50 chr10 8547602 8547995 -137041293 - AluJo SINE Alu 0 419 38 1258 277 106 30 chr10 8548042 8548658 -137040630 + HAL1 LINE L1 1629 2323 -184 821 172 0 8 chr10 8548658 8548792 -137040496 + FLAM_C SINE Alu 1 133 0 1258 277 106 30 chr10 8548792 8548986 -137040302 + HAL1 LINE L1 2323 2501 -6 309 238 148 10 chr10 8549360 8549461 -137039827 + L2 LINE L2 3199 3313 0 324 353 154 0 chr10 8549528 8549820 -137039468 + L2 LINE L2 2638 2974 -340 372 164 0 0 chr10 8550288 8550355 -137038933 + (CA)n Simple_repeat Simple_repeat 1 67 0 337 260 182 39 chr10 8551459 8551613 -137037675 - MIR SINE MIR -86 176 1 318 321 21 86 chr10 8551682 8551728 -137037560 + L2 LINE L2 3142 3189 -83 2142 130 0 3 chr10 8551728 8552029 -137037259 + AluSx SINE Alu 1 300 -12 318 321 21 86 chr10 8552029 8552122 -137037166 + L2 LINE L2 3189 3272 0 538 257 39 56 chr10 8552990 8553169 -137036119 - MIR3 SINE MIR -32 176 1 28 86 0 0 chr10 8553321 8553391 -137035897 + AT_rich Low_complexity Low_complexity 1 70 0 1993 129 0 4 chr10 8553677 8553957 -137035331 + AluSx SINE Alu 1 279 -33 23 0 0 0 chr10 8553997 8554020 -137035268 + AT_rich Low_complexity Low_complexity 1 23 0 819 252 166 19 chr10 8554022 8554383 -137034905 + MLT1J LTR MaLR 98 511 0 282 56 0 0 chr10 8555527 8555563 -137033725 + (TG)n Simple_repeat Simple_repeat 2 37 0 223 265 0 0 chr10 8557175 8557224 -137032064 + (CA)n Simple_repeat Simple_repeat 2 50 0 1963 139 137 11 chr10 8560283 8560663 -137028625 - MSTA LTR MaLR 0 428 1 1782 153 14 14 chr10 8561007 8561319 -137027969 - AluJo SINE Alu 0 312 1 516 206 28 153 chr10 8561473 8561799 -137027489 - L1M4 LINE L1 -1484 4662 4378 428 267 121 11 chr10 8561834 8562107 -137027181 - L1M4 LINE L1 -2465 3681 3379 3673 32 0 0 chr10 8562116 8562551 -137026737 - L1PA3 LINE L1 -5 6150 5716 243 278 156 18 chr10 8563306 8563420 -137025868 - MIR SINE MIR -41 167 35 2026 133 30 0 chr10 8563727 8564028 -137025260 - AluSx SINE Alu -2 310 1 1254 136 166 2 chr10 8564279 8564707 -137024581 - L1PA13 LINE L1 -11 6152 5658 201 333 100 33 chr10 8564842 8564962 -137024326 + L2 LINE L2 3136 3263 -9 363 44 0 0 chr10 8569183 8569228 -137020060 + (CA)n Simple_repeat Simple_repeat 1 45 0 1772 184 0 16 chr10 8571190 8571506 -137017782 - AluJo SINE Alu 0 312 2 181 338 75 12 chr10 8572983 8573063 -137016225 - MIR SINE MIR -163 99 15 365 243 68 79 chr10 8573100 8573277 -137016011 + MIR SINE MIR 33 207 -55 252 0 0 0 chr10 8574233 8574261 -137015027 + (TG)n Simple_repeat Simple_repeat 2 29 0 78 0 0 0 chr10 8574261 8574339 -137014949 + AT_rich Low_complexity Low_complexity 1 78 0 319 236 47 39 chr10 8574339 8574466 -137014822 - L1M4 LINE L1 -2912 3234 3107 52 0 0 0 chr10 8574475 8574527 -137014761 + AT_rich Low_complexity Low_complexity 1 52 0 260 177 35 35 chr10 8574527 8574640 -137014648 + (TATAA)n Simple_repeat Simple_repeat 1 113 0 198 91 55 18 chr10 8574645 8574700 -137014588 + A-rich Low_complexity Low_complexity 2 58 0 296 300 76 57 chr10 8574824 8575034 -137014254 - L2 LINE L2 -3071 243 30 3801 161 85 5 chr10 8576561 8576680 -137012608 - L1MA10 LINE L1 -39 6295 6187 465 19 0 0 chr10 8576680 8576734 -137012554 + (TTTTA)n Simple_repeat Simple_repeat 2 55 0 3801 161 85 5 chr10 8576734 8577367 -137011921 - L1MA10 LINE L1 -147 6187 5483 1834 117 12 4 chr10 8577417 8577666 -137011622 + AluSc SINE Alu 7 257 -52 1087 248 193 39 chr10 8577770 8578287 -137011001 - L2 LINE L2 -2482 832 236 2167 103 6 13 chr10 8578287 8578599 -137010689 + AluSg SINE Alu 1 310 0 420 37 0 0 chr10 8579538 8579592 -137009696 + (CA)n Simple_repeat Simple_repeat 2 55 0 346 188 21 21 chr10 8580399 8580495 -137008793 + CT-rich Low_complexity Low_complexity 1 96 0 261 139 0 0 chr10 8580488 8580531 -137008757 + (TCTCC)n Simple_repeat Simple_repeat 1 43 0 * 391 273 327 0 chr10 8580663 8580828 -137008460 - MIR SINE MIR -26 236 18 319 282 129 29 chr10 8581078 8581248 -137008040 - MIR SINE MIR -45 217 31 1368 143 0 66 chr10 8581662 8581906 -137007382 + AluJo SINE Alu 40 267 -45 217 216 0 0 chr10 8582055 8582092 -137007196 + polypyrimidine Low_complexity Low_complexity 3 39 0 377 182 20 27 chr10 8582099 8582247 -137007041 + (TA)n Simple_repeat Simple_repeat 2 148 0 25 0 0 0 chr10 8582413 8582438 -137006850 + AT_rich Low_complexity Low_complexity 1 25 0 1283 141 13 0 chr10 8582907 8583134 -137006154 - L1MB1 LINE L1 -34 6155 5926 473 145 0 0 chr10 8583135 8583218 -137006070 + L1M3 LINE L1 5570 5652 -516 2592 43 0 0 chr10 8583606 8583909 -137005379 + AluY SINE Alu 2 304 -7 575 259 25 37 chr10 8584429 8584591 -137004697 + MIR3 SINE MIR 46 205 -3 215 143 0 18 chr10 8584815 8584871 -137004417 + (TA)n Simple_repeat Simple_repeat 2 56 0 2249 98 3 0 chr10 8584871 8585156 -137004132 - AluSp SINE Alu -27 286 1 206 275 110 0 chr10 8585929 8586020 -137003268 + MIR SINE MIR 118 218 -44 868 312 83 67 chr10 8586151 8586895 -137002393 + L2 LINE L2 1174 1929 -1385 710 338 115 16 chr10 8586912 8587039 -137002249 + L2 LINE L2 2304 2417 -897 2415 149 14 41 chr10 8587039 8587475 -137001813 - MSTB LTR MaLR -2 424 1 710 338 115 16 chr10 8587475 8587773 -137001515 + L2 LINE L2 2417 2771 -543 375 329 126 11 chr10 8588243 8588520 -137000768 + MLT1J2 LTR MaLR 64 372 -78 532 250 0 8 chr10 8588587 8588711 -137000577 + MER58B DNA MER1_type 219 341 0 242 396 139 0 chr10 8588845 8588989 -137000299 - L2 LINE L2 -5 3267 3104 1200 254 86 17 chr10 8589061 8589467 -136999821 - LTR16A LTR ERVL 0 450 17 214 342 5 86 chr10 8589477 8589664 -136999624 - L2 LINE L2 -210 3062 2891 1014 128 41 0 chr10 8590359 8590531 -136998757 - THE1C LTR MaLR 0 375 197 254 210 16 0 chr10 8590597 8590677 -136998611 + (TATTG)n Simple_repeat Simple_repeat 1 81 0 2175 128 3 13 chr10 8591192 8591504 -136997784 - AluSx SINE Alu -3 309 1 411 303 96 28 chr10 8591598 8591776 -136997512 - L3b LINE CR1 -118 1465 1276 4683 50 0 3 chr10 8593300 8593880 -136995408 - L1PA5 LINE L1 -1 6153 5576 203 255 43 128 chr10 8594005 8594146 -136995142 - L2 LINE L2 -217 3055 2927 729 141 62 23 chr10 8594395 8594523 -136994765 + FLAM_C SINE Alu 1 133 0 21 0 0 0 chr10 8596405 8596426 -136992862 + AT_rich Low_complexity Low_complexity 1 21 0 2487 61 0 0 chr10 8596805 8597098 -136992190 + AluY SINE Alu 3 295 -16 2422 97 0 0 chr10 8597390 8597701 -136991587 + AluSx SINE Alu 1 311 -1 646 322 19 14 chr10 8600503 8600714 -136988574 + MIR SINE MIR 3 214 -48 1577 226 7 0 chr10 8600786 8601136 -136988152 - AluJo SINE Alu 0 352 1 206 231 115 26 chr10 8601139 8601217 -136988071 + L2 LINE L2 3188 3272 0 864 136 0 22 chr10 8602181 8602365 -136986923 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 200 108 0 27 chr10 8602453 8602490 -136986798 + (TCCC)n Simple_repeat Simple_repeat 4 39 0 186 229 16 66 chr10 8602552 8602613 -136986675 - L2 LINE L2 0 3313 3256 230 236 0 18 chr10 8603538 8603593 -136985695 + (TG)n Simple_repeat Simple_repeat 1 54 0 2333 153 9 24 chr10 8604743 8605168 -136984120 + MSTA LTR MaLR 1 419 -9 362 123 0 3 chr10 8605270 8605521 -136983767 + AluSg SINE Alu 1 323 0 566 49 12 0 chr10 8606796 8606878 -136982410 + (CA)n Simple_repeat Simple_repeat 2 84 0 684 206 55 7 chr10 8607858 8608004 -136981284 - MER105 DNA DNA -1 203 51 879 15 2 92 chr10 8608395 8608873 -136980415 + (TA)n Simple_repeat Simple_repeat 1 435 0 235 61 61 51 chr10 8608859 8608957 -136980331 + (CATAT)n Simple_repeat Simple_repeat 2 100 0 * 240 343 52 0 chr10 8609405 8609539 -136979749 + L2 LINE L2 2890 3030 -283 1249 104 5 40 chr10 8609548 8609749 -136979539 - L1MA5A LINE L1 0 6297 6104 1148 145 0 2 chr10 8609752 8609993 -136979295 - AluJb SINE Alu -15 297 16 1665 139 20 10 chr10 8610009 8610303 -136978985 - L1MA5A LINE L1 -187 6110 5814 383 322 82 19 chr10 8610340 8610548 -136978740 + L2 LINE L2 3093 3313 0 2664 45 0 3 chr10 8610701 8611013 -136978275 - AluY SINE Alu 0 311 1 915 68 0 68 chr10 8611013 8611137 -136978151 - L1PA7 LINE L1 -7 6147 6031 1892 128 36 4 chr10 8611138 8611419 -136977869 - AluSx SINE Alu -22 290 1 558 167 0 0 chr10 8611900 8611984 -136977304 + AluJb SINE Alu 137 220 -92 2917 119 2 36 chr10 8611984 8612239 -136977049 + L1PB2 LINE L1 5721 5956 -195 2180 103 7 0 chr10 8612239 8612529 -136976759 + AluSq SINE Alu 1 292 -21 2917 119 2 36 chr10 8612529 8612718 -136976570 + L1PB2 LINE L1 5956 6150 -1 350 298 93 4 chr10 8612779 8612940 -136976348 + MIR SINE MIR 16 188 -74 679 303 85 43 chr10 8613119 8613662 -136975626 - MLT1L LTR MaLR -9 606 1 2220 112 0 20 chr10 8614152 8614457 -136974831 - AluSg SINE Alu -11 299 1 1936 166 3 0 chr10 8614488 8614790 -136974498 - AluSx SINE Alu -9 303 1 22 35 0 0 chr10 8614928 8614957 -136974331 + AT_rich Low_complexity Low_complexity 1 29 0 454 318 28 74 chr10 8615310 8615593 -136973695 + L3 LINE CR1 1307 1576 -1 357 75 0 0 chr10 8616514 8616567 -136972721 + (TA)n Simple_repeat Simple_repeat 1 53 0 2272 100 0 3 chr10 8616631 8616931 -136972357 + AluSg SINE Alu 2 300 -10 261 0 0 0 chr10 8617302 8617331 -136971957 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 244 145 43 58 chr10 8617459 8617528 -136971760 - L1P3 LINE L1 -5949 512 445 1787 138 35 21 chr10 8621428 8621717 -136967571 + AluSx SINE Alu 1 293 -19 218 225 0 0 chr10 8622005 8622045 -136967243 + MIR SINE MIR 40 79 -129 267 299 63 67 chr10 8622223 8622477 -136966811 - L2 LINE L2 -341 2973 2721 566 135 101 0 chr10 8623064 8623185 -136966103 + AluJb SINE Alu 187 316 0 287 243 92 25 chr10 8623283 8623405 -136965883 - MIR SINE MIR -63 145 38 430 267 35 26 chr10 8623930 8624046 -136965242 + MIR SINE MIR 3 119 -143 428 282 18 9 chr10 8624101 8624211 -136965077 - L2 LINE L2 -10 3303 3193 994 181 5 29 chr10 8624372 8624576 -136964712 + Charlie5 DNA MER1_type 2 200 -2412 * 1085 193 59 15 chr10 8624562 8624832 -136964456 + Charlie5 DNA MER1_type 2343 2624 0 309 242 68 37 chr10 8625989 8626102 -136963186 - MIR SINE MIR -81 127 11 1380 179 33 22 chr10 8626176 8626500 -136962788 + AluJo SINE Alu 34 312 0 201 265 137 49 chr10 8627794 8627896 -136961392 + L2 LINE L2 3162 3272 0 1843 166 31 0 chr10 8628874 8629164 -136960124 + AluJb SINE Alu 5 303 -9 236 270 113 26 chr10 8630268 8630383 -136958905 + L2 LINE L2 3182 3306 -7 850 248 41 37 chr10 8632147 8632389 -136956899 + MIR SINE MIR 1 243 -19 277 223 136 10 chr10 8632509 8632612 -136956676 - MER103 DNA DNA -47 119 4 247 284 55 37 chr10 8633734 8633764 -136955524 + MIR3 SINE MIR 71 99 -109 1961 145 0 31 chr10 8633764 8634082 -136955206 - AluJo SINE Alu -4 308 1 247 284 55 37 chr10 8634082 8634160 -136955128 + MIR3 SINE MIR 99 181 -27 215 197 0 45 chr10 8635183 8635249 -136954039 + (TGAA)n Simple_repeat Simple_repeat 1 63 0 1737 158 7 34 chr10 8635370 8635668 -136953620 - AluJo SINE Alu -22 290 1 2128 113 13 10 chr10 8636159 8636468 -136952820 + AluSx SINE Alu 1 310 -2 819 153 8 0 chr10 8636546 8636677 -136952611 - FLAM_C SINE Alu 0 143 12 44 20 0 0 chr10 8636760 8636811 -136952477 + AT_rich Low_complexity Low_complexity 1 51 0 251 277 98 103 chr10 8636823 8637254 -136952034 - L2 LINE L2 -6 3307 2875 3925 142 89 8 chr10 8637254 8637908 -136951380 - MER39 LTR ERV1 0 707 1 251 277 98 103 chr10 8637908 8638059 -136951229 - L2 LINE L2 -438 2875 2725 1872 153 24 0 chr10 8638059 8638346 -136950942 + AluJb SINE Alu 1 294 -18 251 277 98 103 chr10 8638346 8638507 -136950781 - L2 LINE L2 -588 2725 2553 800 183 0 0 chr10 8638719 8638839 -136950449 - FLAM_C SINE Alu -22 121 2 497 302 108 29 chr10 8639523 8639867 -136949421 + MLT1J LTR MaLR 106 476 -35 1610 185 3 64 chr10 8640100 8640430 -136948858 + AluJb SINE Alu 1 310 -2 181 308 0 0 chr10 8640708 8640760 -136948528 - L2 LINE L2 0 3313 3262 846 165 0 0 chr10 8640954 8641087 -136948201 - FLAM_C SINE Alu 0 133 1 1846 129 20 0 chr10 8641154 8641447 -136947841 + AluSx SINE Alu 24 321 0 5031 94 12 0 chr10 8641763 8642415 -136946873 - L1PA10 LINE L1 -4 6164 5505 210 368 128 0 chr10 8642764 8642881 -136946407 - L2 LINE L2 -4 3268 3137 1654 171 50 4 chr10 8643717 8643997 -136945291 + AluJb SINE Alu 1 293 -19 632 241 97 5 chr10 8644622 8644817 -136944471 + L2 LINE L2 2132 2344 -970 186 43 0 0 chr10 8644818 8644841 -136944447 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 826 197 58 21 chr10 8644845 8645033 -136944255 - AluJo SINE Alu -31 281 87 180 0 0 0 chr10 8645051 8645071 -136944217 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1802 164 4 0 chr10 8645084 8645359 -136943929 - AluSx SINE Alu -36 276 1 1987 130 10 3 chr10 8645836 8646129 -136943159 - AluSx SINE Alu -17 295 1 707 304 69 42 chr10 8646129 8646631 -136942657 - L2 LINE L2 -21 3292 2706 1040 93 2 7 chr10 8646631 8646777 -136942511 - L1P LINE L1 -1500 4646 4498 2134 89 4 0 chr10 8646777 8647047 -136942241 + L1PA7 LINE L1 5884 6154 0 564 279 105 39 chr10 8647068 8647154 -136942134 - L2 LINE L2 -613 2701 2622 628 239 123 7 chr10 8647154 8647309 -136941979 - MER96 DNA MER1_type -2 173 1 564 279 105 39 chr10 8647309 8647631 -136941657 - L2 LINE L2 -692 2622 2266 791 5 0 97 chr10 8647797 8647992 -136941296 + (TA)n Simple_repeat Simple_repeat 2 177 0 243 372 85 16 chr10 8648056 8648185 -136941103 - L2 LINE L2 -12 3260 3123 558 348 77 23 chr10 8648235 8648753 -136940535 - L2 LINE L2 -556 2758 2213 277 324 56 9 chr10 8648911 8649019 -136940269 + L2 LINE L2 3199 3311 -2 314 293 136 16 chr10 8649049 8649291 -136939997 - L2 LINE L2 -1292 2022 1752 185 250 0 94 chr10 8649500 8649564 -136939724 - L3 LINE CR1 -219 1358 1301 1609 135 27 30 chr10 8649870 8650167 -136939121 + AluJb SINE Alu 1 296 -16 312 27 0 0 chr10 8650785 8650822 -136938466 + (TG)n Simple_repeat Simple_repeat 2 38 0 228 35 0 0 chr10 8650821 8650850 -136938438 + (TA)n Simple_repeat Simple_repeat 1 29 0 * 296 306 42 119 chr10 8651488 8651890 -136937398 - L2 LINE L2 -4 3268 2898 2872 7 0 0 chr10 8651906 8652214 -136937074 - AluY SINE Alu -3 308 1 6727 94 10 3 chr10 8652222 8653457 -136935831 + L1PA12 LINE L1 4921 6161 -7 2554 52 7 0 chr10 8653858 8654163 -136935125 + AluY SINE Alu 1 307 -4 913 131 0 8 chr10 8654411 8654541 -136934747 + FLAM_C SINE Alu 1 129 -4 348 230 103 40 chr10 8655027 8655153 -136934135 + MIR SINE MIR 123 256 -6 1791 178 69 94 chr10 8655641 8655718 -136933570 - MLT1C LTR MaLR 0 467 390 1655 143 31 0 chr10 8655718 8655847 -136933441 - AluSx SINE Alu -46 266 142 423 0 0 0 chr10 8655847 8655894 -136933394 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 1655 143 31 0 chr10 8655894 8656022 -136933266 - AluSx SINE Alu -170 142 1 1791 178 69 94 chr10 8656022 8656423 -136932865 - MLT1C LTR MaLR -77 390 1 347 246 25 49 chr10 8656657 8656779 -136932509 - L2 LINE L2 -15 3298 3180 597 128 0 86 chr10 8656821 8656850 -136932438 + MLT1B LTR MaLR 81 111 -279 1856 156 0 47 chr10 8656850 8657171 -136932117 + AluSx SINE Alu 1 306 -6 597 128 0 86 chr10 8657171 8657258 -136932030 + MLT1B LTR MaLR 111 187 -203 723 69 11 0 chr10 8657266 8657353 -136931935 + AluY SINE Alu 205 292 -19 980 188 15 10 chr10 8657370 8657567 -136931721 + MLT1B LTR MaLR 188 385 -5 370 216 98 10 chr10 8657571 8657673 -136931615 + MER58B DNA MER1_type 186 296 -45 2104 137 10 0 chr10 8657765 8658071 -136931217 - AluY SINE Alu -2 309 1 487 300 96 26 chr10 8658159 8658389 -136930899 - MIR SINE MIR -14 248 3 3719 153 13 38 chr10 8658465 8659145 -136930143 - L1MA9 LINE L1 -146 6166 5504 343 287 128 0 chr10 8659221 8659315 -136929973 - L2 LINE L2 -25 3288 3183 31 0 0 0 chr10 8659698 8659729 -136929559 + AT_rich Low_complexity Low_complexity 1 31 0 2101 116 13 16 chr10 8659744 8660054 -136929234 - L1PA14 LINE L1 -17 6144 5836 949 162 0 0 chr10 8660768 8660910 -136928378 - FRAM SINE Alu -15 161 20 30 59 0 0 chr10 8662330 8662381 -136926907 + AT_rich Low_complexity Low_complexity 1 51 0 219 69 0 0 chr10 8662387 8662416 -136926872 + (TCTA)n Simple_repeat Simple_repeat 2 30 0 1920 139 0 17 chr10 8662416 8662704 -136926584 - AluSx SINE Alu -23 289 7 432 0 0 0 chr10 8664433 8664481 -136924807 + (TAGA)n Simple_repeat Simple_repeat 3 50 0 200 83 0 28 chr10 8664481 8664517 -136924771 + (TA)n Simple_repeat Simple_repeat 2 36 0 21 36 0 0 chr10 8664888 8664916 -136924372 + AT_rich Low_complexity Low_complexity 1 28 0 256 296 12 12 chr10 8664974 8665055 -136924233 - MIR SINE MIR -71 137 57 207 0 0 0 chr10 8665058 8665081 -136924207 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1897 156 0 0 chr10 8665633 8665908 -136923380 + AluSx SINE Alu 1 275 -37 244 122 61 0 chr10 8666421 8666503 -136922785 + (TA)n Simple_repeat Simple_repeat 1 87 0 434 107 71 6 chr10 8666517 8666686 -136922602 + (TA)n Simple_repeat Simple_repeat 1 180 0 208 152 57 13 chr10 8666698 8666856 -136922432 + (TA)n Simple_repeat Simple_repeat 2 166 0 236 272 44 38 chr10 8666875 8667033 -136922255 + L1MC4 LINE L1 7719 7877 -165 220 296 0 0 chr10 8667040 8667094 -136922194 + (TATATG)n Simple_repeat Simple_repeat 2 55 0 913 119 0 0 chr10 8667314 8667456 -136921832 - FLAM_C SINE Alu 0 142 1 223 317 58 50 chr10 8667474 8667594 -136921694 - MIR SINE MIR -139 123 3 2015 152 141 8 chr10 8668676 8669052 -136920236 - MSTA LTR MaLR 0 428 3 222 279 108 31 chr10 8669194 8669323 -136919965 - L2 LINE L2 0 3313 3175 2091 241 156 142 chr10 8669397 8669547 -136919741 - L2 LINE L2 -8 3305 3159 2044 137 7 0 chr10 8669547 8669839 -136919449 + AluSx SINE Alu 8 301 -11 2091 241 156 142 chr10 8669839 8670589 -136918699 - L2 LINE L2 -154 3159 2422 1275 169 0 14 chr10 8670589 8670802 -136918486 + AluJo SINE Alu 1 210 -102 2091 241 156 142 chr10 8670802 8670821 -136918467 - L2 LINE L2 -891 2422 2405 221 0 35 0 chr10 8670821 8670850 -136918438 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 2091 241 156 142 chr10 8670850 8671536 -136917752 - L2 LINE L2 -908 2405 1731 2145 118 0 13 chr10 8671536 8671840 -136917448 - AluSx SINE Alu -12 300 1 2091 241 156 142 chr10 8671840 8672377 -136916911 - L2 LINE L2 -1582 1731 1203 2292 81 24 0 chr10 8672377 8672673 -136916615 - AluSp SINE Alu -10 303 1 1774 181 0 16 chr10 8672673 8672987 -136916301 - AluJo SINE Alu -3 309 1 2091 241 156 142 chr10 8672987 8673117 -136916171 - L2 LINE L2 -2109 1204 790 315 0 0 0 chr10 8675576 8675611 -136913677 + (CA)n Simple_repeat Simple_repeat 2 36 0 2311 101 0 3 chr10 8676813 8676835 -136912453 - AluY SINE Alu -4 307 286 210 105 0 0 chr10 8676835 8676873 -136912415 + (TTTAA)n Simple_repeat Simple_repeat 3 40 0 2311 101 0 3 chr10 8676873 8677158 -136912130 - AluY SINE Alu -25 286 1 1383 187 90 14 chr10 8677163 8677441 -136911847 - AluJb SINE Alu -13 299 1 204 40 0 0 chr10 8677742 8677767 -136911521 + (A)n Simple_repeat Simple_repeat 1 25 0 525 274 86 16 chr10 8678200 8678386 -136910902 - MIR SINE MIR -54 208 10 210 302 245 0 chr10 8679022 8679128 -136910160 - L2 LINE L2 -4 3268 3137 633 89 50 0 chr10 8679574 8679675 -136909613 + L1PA3 LINE L1 5909 6014 -141 343 122 0 0 chr10 8679776 8679825 -136909463 - L1PA13 LINE L1 -293 5870 5822 401 352 91 13 chr10 8680706 8680936 -136908352 - MIR SINE MIR -3 259 12 1990 138 0 0 chr10 8681204 8681479 -136907809 + AluSx SINE Alu 1 275 -37 207 0 0 0 chr10 8681484 8681507 -136907781 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 829 172 0 0 chr10 8682028 8682150 -136907138 + FLAM_C SINE Alu 2 123 -20 227 227 39 16 chr10 8682790 8682918 -136906370 + (TA)n Simple_repeat Simple_repeat 2 132 0 1849 173 146 3 chr10 8683331 8683700 -136905588 + MSTB LTR MaLR 1 422 -4 416 213 71 39 chr10 8683734 8683861 -136905427 - MIR SINE MIR -120 142 12 1500 172 67 0 chr10 8684606 8684891 -136904397 - AluJo SINE Alu -8 304 1 198 281 73 135 chr10 8684896 8685184 -136904104 + L2 LINE L2 3001 3270 -2 354 98 0 0 chr10 8687390 8687441 -136901847 + (TTCC)n Simple_repeat Simple_repeat 2 52 0 1463 179 39 8 chr10 8687462 8687719 -136901569 - AluJo SINE Alu -47 265 1 240 122 0 0 chr10 8687754 8687795 -136901493 + (A)n Simple_repeat Simple_repeat 1 41 0 665 269 91 10 chr10 8688569 8688777 -136900511 + MIR SINE MIR 6 230 -32 831 155 54 7 chr10 8688900 8689048 -136900240 - AluJo/FRAM SINE Alu -2 310 156 519 120 0 0 chr10 8689048 8689123 -136900165 - AluJ/FLAM SINE Alu -233 69 3 2582 59 0 0 chr10 8690309 8690616 -136898672 - AluY SINE Alu -4 307 1 252 59 0 0 chr10 8690811 8690845 -136898443 + (CCAA)n Simple_repeat Simple_repeat 2 35 0 1950 167 0 3 chr10 8691787 8692098 -136897190 + AluSx SINE Alu 2 311 -1 1108 150 12 0 chr10 8692098 8692258 -136897030 + AluJb SINE Alu 135 296 -16 1635 194 36 72 chr10 8692999 8693031 -136896257 - MLT2C1 LTR ERVL -8 389 357 181 57 57 0 chr10 8693031 8693066 -136896222 + (TG)n Simple_repeat Simple_repeat 2 38 0 1635 194 36 72 chr10 8693066 8693098 -136896190 - MLT2C1 LTR ERVL -40 357 325 2000 117 47 7 chr10 8693098 8693396 -136895892 + AluSg SINE Alu 1 310 0 1635 194 36 72 chr10 8693396 8693721 -136895567 - MLT2C1 LTR ERVL -72 325 13 296 296 59 32 chr10 8695152 8695362 -136893926 + MIR SINE MIR 8 262 0 2206 121 3 3 chr10 8695709 8696016 -136893272 - AluSx SINE Alu -5 307 1 186 339 15 15 chr10 8696313 8696378 -136892910 - MIR3 SINE MIR -26 182 118 355 404 31 6 chr10 8696497 8696658 -136892630 + L2 LINE L2 3107 3271 -1 216 167 37 19 chr10 8698119 8698173 -136891115 + CT-rich Low_complexity Low_complexity 3 57 0 1604 182 7 39 chr10 8698569 8698876 -136890412 - AluJb SINE Alu -15 297 1 187 224 0 61 chr10 8699889 8699938 -136889350 - L2 LINE L2 0 3272 3227 21 36 0 0 chr10 8701935 8701963 -136887325 + AT_rich Low_complexity Low_complexity 1 28 0 191 236 125 14 chr10 8702955 8703027 -136886261 + MIR SINE MIR 84 164 -44 191 289 19 0 chr10 8703231 8703283 -136886005 - L2 LINE L2 -2 3270 3218 214 353 106 0 chr10 8703405 8703490 -136885798 - L2 LINE L2 -40 3232 3139 241 252 160 8 chr10 8703530 8703649 -136885639 + L2 LINE L2 1181 1317 -1997 2165 102 10 0 chr10 8703650 8703945 -136885343 - AluSc SINE Alu -10 299 2 2202 129 11 33 chr10 8704427 8704791 -136884497 + L1PA14 LINE L1 5797 6152 -9 322 263 188 15 chr10 8705223 8705356 -136883932 + MER5B DNA MER1_type 21 176 -2 407 278 15 60 chr10 8705369 8705502 -136883786 - MER5B DNA MER1_type 0 178 52 781 286 45 11 chr10 8705696 8705983 -136883305 + AluJo SINE Alu 1 297 -5 840 144 0 0 chr10 8706323 8706441 -136882847 + FLAM_C SINE Alu 1 118 -25 22 36 0 55 chr10 8706447 8706467 -136882821 + AT_rich Low_complexity Low_complexity 1 21 -31 3830 95 10 0 chr10 8706467 8706961 -136882327 + L1PA10 LINE L1 5665 6163 -5 22 36 0 55 chr10 8706961 8706995 -136882293 + AT_rich Low_complexity Low_complexity 21 52 0 2234 113 10 3 chr10 8707983 8708293 -136880995 - AluSx SINE Alu 0 312 1 331 336 195 34 chr10 8708541 8708764 -136880524 + L3 LINE CR1 1099 1285 -292 1742 161 27 7 chr10 8708764 8709056 -136880232 + AluJo SINE Alu 1 298 -14 331 336 195 34 chr10 8709056 8709243 -136880045 + L3 LINE CR1 1285 1575 -2 516 106 47 35 chr10 8709818 8709903 -136879385 + FRAM SINE Alu 30 115 -61 484 66 11 66 chr10 8710237 8710328 -136878960 - L1PA13 LINE L1 0 6163 6078 1530 57 38 5 chr10 8710334 8710543 -136878745 - L1PA12 LINE L1 -49 6119 5904 2291 85 0 3 chr10 8710547 8710842 -136878446 - AluSx SINE Alu -18 294 1 216 0 0 0 chr10 8710910 8710934 -136878354 + (A)n Simple_repeat Simple_repeat 1 24 0 211 232 101 29 chr10 8711370 8711439 -136877849 + MIR SINE MIR 117 190 -72 1693 160 3 10 chr10 8711512 8711805 -136877483 - AluJo SINE Alu -13 299 9 198 0 0 0 chr10 8711846 8711868 -136877420 + (T)n Simple_repeat Simple_repeat 1 22 0 849 92 0 0 chr10 8711955 8712075 -136877213 + (TTAGGG)n Simple_repeat Simple_repeat 6 125 0 1297 68 6 28 chr10 8712360 8712536 -136876752 - L1PA4 LINE L1 -1 6154 5983 1924 133 31 3 chr10 8712559 8712853 -136876435 - AluSx SINE Alu -10 302 1 268 343 84 24 chr10 8713005 8713171 -136876117 - MIR SINE MIR -2 260 85 220 351 82 62 chr10 8713199 8713504 -136875784 - L2 LINE L2 -11 3261 2951 2054 96 64 0 chr10 8714530 8714812 -136874476 - AluSq SINE Alu -13 300 1 23 54 0 0 chr10 8716385 8716422 -136872866 + AT_rich Low_complexity Low_complexity 1 37 0 217 231 79 4 chr10 8716805 8716876 -136872412 + MIR SINE MIR 77 151 -57 305 371 59 27 chr10 8716927 8717148 -136872140 + MIR SINE MIR 32 259 -3 748 294 5 23 chr10 8717221 8717439 -136871849 - MIR SINE MIR -21 241 28 1704 153 7 27 chr10 8717447 8717741 -136871547 - AluJo SINE Alu -20 292 5 252 178 76 119 chr10 8717892 8718010 -136871278 + MER103 DNA DNA 8 120 -46 528 136 0 0 chr10 8718071 8718159 -136871129 + (TTCC)n Simple_repeat Simple_repeat 1 88 0 373 318 71 26 chr10 8720340 8720494 -136868794 - MIR3 SINE MIR -46 162 2 2299 114 0 0 chr10 8720715 8721023 -136868265 + AluSg SINE Alu 1 308 -2 243 88 0 0 chr10 8721540 8721574 -136867714 + (A)n Simple_repeat Simple_repeat 1 34 0 797 262 91 92 chr10 8722021 8722143 -136867145 - L2 LINE L2 -165 3148 3027 2266 92 3 10 chr10 8722143 8722448 -136866840 + AluSp SINE Alu 1 303 -10 797 262 91 92 chr10 8722448 8722982 -136866306 - L2 LINE L2 -286 3027 2502 1713 182 129 29 chr10 8722983 8723023 -136866265 - MER47B DNA MER2_type -1905 418 383 2738 131 13 0 chr10 8723023 8723421 -136865867 + MER57A LTR ERV1 1 403 0 1713 182 129 29 chr10 8723421 8723760 -136865528 - MER47B DNA MER2_type -1940 383 1 265 197 0 16 chr10 8723798 8723859 -136865429 + L1MA4 LINE L1 6230 6289 -11 201 108 0 0 chr10 8723867 8723878 -136865410 + (TTAA)n Simple_repeat Simple_repeat 2 12 -26 1861 161 0 20 chr10 8723878 8724182 -136865106 - AluJb SINE Alu -14 298 1 201 108 0 0 chr10 8724182 8724193 -136865095 + (TTAA)n Simple_repeat Simple_repeat 12 22 -16 2423 62 3 0 chr10 8724193 8724485 -136864803 - AluY SINE Alu -13 298 6 201 108 0 0 chr10 8724485 8724498 -136864790 + (TTAA)n Simple_repeat Simple_repeat 21 38 0 1622 232 139 24 chr10 8724508 8725042 -136864246 - L2 LINE L2 -842 2472 1878 987 201 7 97 chr10 8725079 8725358 -136863930 - L1MB8 LINE L1 0 6178 5925 2509 160 17 0 chr10 8725359 8725777 -136863511 - L1MA6 LINE L1 -237 6063 5639 372 285 16 24 chr10 8725777 8725900 -136863388 - L2 LINE L2 -1431 1883 1762 2683 108 19 11 chr10 8726648 8727020 -136862268 + THE1C LTR MaLR 1 375 0 21 0 0 0 chr10 8727487 8727508 -136861780 + AT_rich Low_complexity Low_complexity 1 21 0 2689 29 0 16 chr10 8728100 8728415 -136860873 - AluY SINE Alu -1 310 1 907 176 152 10 chr10 8728880 8729084 -136860204 + ORSL DNA AcHobo 19 251 -24 2198 123 0 7 chr10 8729259 8729606 -136859682 - AluSg SINE Alu 0 345 1 1414 84 0 1 chr10 8729811 8729828 -136859460 + L1PA8 LINE L1 5792 5808 -364 1339 76 32 32 chr10 8729828 8730013 -136859275 - L1PA8 LINE L1 -4 6168 5984 1414 84 0 1 chr10 8730013 8730191 -136859097 + L1PA8 LINE L1 5808 5985 -187 1022 185 0 6 chr10 8730877 8731050 -136858238 - AluJo SINE Alu -130 182 11 2264 89 0 3 chr10 8731227 8731520 -136857768 - AluSc SINE Alu -17 292 1 1914 136 43 13 chr10 8731805 8732106 -136857182 - AluSx SINE Alu -2 310 1 315 339 26 52 chr10 8732163 8732278 -136857010 + MIR SINE MIR 34 145 -63 29 28 0 0 chr10 8732719 8732755 -136856533 + AT_rich Low_complexity Low_complexity 1 36 0 201 239 22 0 chr10 8732773 8732819 -136856469 - MIR SINE MIR -10 252 206 444 340 42 37 chr10 8733027 8733371 -136855917 - L1MC/D LINE L1 -571 5591 5268 823 171 0 0 chr10 8733407 8733524 -136855764 + FLAM_C SINE Alu 2 118 -25 387 0 0 0 chr10 8733527 8733570 -136855718 + (TTA)n Simple_repeat Simple_repeat 2 44 0 600 262 131 9 chr10 8734099 8734328 -136854960 - L1ME LINE L1 -335 5786 5530 458 338 33 14 chr10 8734714 8734924 -136854364 - MIR SINE MIR -1 261 48 181 284 47 88 chr10 8735061 8735209 -136854079 - L2 LINE L2 -829 2485 2344 856 157 8 0 chr10 8735279 8735413 -136853875 + AluJo SINE Alu 1 135 -177 36 77 0 0 chr10 8735430 8735508 -136853780 + AT_rich Low_complexity Low_complexity 1 78 0 222 364 13 0 chr10 8735987 8736064 -136853224 - L2 LINE L2 -1007 2307 2230 1238 268 66 70 chr10 8736107 8736682 -136852606 + MLT1G LTR MaLR 7 579 -11 1421 193 0 53 chr10 8737145 8737446 -136851842 + AluJo SINE Alu 3 287 -25 249 108 0 0 chr10 8737446 8737483 -136851805 + (GGGGA)n Simple_repeat Simple_repeat 2 38 0 532 163 41 0 chr10 8737547 8737645 -136851643 + MLT1G LTR MaLR 489 590 0 2158 235 74 10 chr10 8737791 8738510 -136850778 - L1ME1 LINE L1 -281 5885 5119 248 259 42 105 chr10 8738517 8738660 -136850628 + L1ME1 LINE L1 5998 6131 -35 2172 78 18 4 chr10 8739379 8739689 -136849599 - AluSq SINE Alu 0 315 2 253 75 38 19 chr10 8739728 8739781 -136849507 + T-rich Low_complexity Low_complexity 2 55 0 551 281 7 0 chr10 8740227 8740380 -136848908 - L1MC/D LINE L1 -923 5223 5070 1833 154 3 7 chr10 8740573 8740886 -136848402 - AluSx SINE Alu 0 312 1 2059 141 7 0 chr10 8741207 8741511 -136847777 + AluSq SINE Alu 1 306 -7 267 103 0 0 chr10 8741532 8741571 -136847717 + (GGGA)n Simple_repeat Simple_repeat 2 40 0 433 218 171 47 chr10 8742271 8742441 -136846847 + MIR SINE MIR 42 232 -30 230 252 107 38 chr10 8742522 8742653 -136846635 + L1ME4a LINE L1 5965 6104 -17 316 297 86 40 chr10 8742686 8743083 -136846205 + L1ME4a LINE L1 5682 6096 -25 1901 143 0 7 chr10 8743132 8743412 -136845876 + AluSx SINE Alu 16 293 -19 2400 124 19 8 chr10 8744145 8744508 -136844780 + L1MA1 LINE L1 5936 6302 0 1663 188 0 7 chr10 8744525 8744850 -136844438 + AluJb SINE Alu 1 323 0 263 323 21 4 chr10 8745039 8745168 -136844120 + MIR SINE MIR 14 147 -61 186 143 0 0 chr10 8748824 8748859 -136840429 + (TTTTC)n Simple_repeat Simple_repeat 2 36 0 3289 168 42 5 chr10 8749106 8749672 -136839616 + L1PA16 LINE L1 5576 6162 -4 323 287 130 0 chr10 8752010 8752118 -136837170 + L2 LINE L2 3192 3313 0 2222 107 0 3 chr10 8753074 8753365 -136835923 - AluSc SINE Alu -19 290 1 2531 151 9 24 chr10 8753468 8753893 -136835395 - MSTA LTR MaLR -9 419 1 198 294 20 0 chr10 8755881 8755932 -136833356 + MIR SINE MIR 93 144 -64 553 263 22 62 chr10 8755946 8756125 -136833163 - MER5B DNA MER1_type -6 172 1 728 225 144 148 chr10 8757022 8757529 -136831759 + MLT1D LTR MaLR 1 505 0 1747 156 16 41 chr10 8757703 8758023 -136831265 - AluJb SINE Alu 0 312 1 1317 163 8 145 chr10 8758902 8759302 -136829986 - MLT1B LTR MaLR -3 387 43 191 367 0 22 chr10 8760203 8760293 -136828995 + MIR SINE MIR 25 112 -96 2613 82 13 16 chr10 8760369 8760745 -136828543 - THE1C LTR MaLR 0 375 1 25 0 0 0 chr10 8762086 8762111 -136827177 + AT_rich Low_complexity Low_complexity 1 25 0 1142 211 0 31 chr10 8762142 8762369 -136826919 - AluJo SINE Alu -92 220 1 23 0 0 0 chr10 8762908 8762931 -136826357 + AT_rich Low_complexity Low_complexity 1 23 0 699 202 93 0 chr10 8763506 8763635 -136825653 + FAM SINE Alu 18 158 -27 993 104 6 12 chr10 8763635 8763808 -136825480 + (GAAA)n Simple_repeat Simple_repeat 1 172 0 314 154 0 15 chr10 8763838 8763903 -136825385 + GA-rich Low_complexity Low_complexity 1 64 0 1836 115 83 0 chr10 8764319 8764597 -136824691 - AluSx SINE Alu -10 302 2 320 338 50 14 chr10 8764666 8764805 -136824483 - L2 LINE L2 -5 3308 3165 249 245 337 0 chr10 8764904 8765002 -136824286 + L2 LINE L2 3182 3312 -1 298 322 152 23 chr10 8765026 8765374 -136823914 - L2 LINE L2 -56 3257 2865 1254 158 0 19 chr10 8765597 8765806 -136823482 + AluJo SINE Alu 86 290 -22 1830 164 65 14 chr10 8766245 8766616 -136822672 + MLT1B LTR MaLR 1 390 0 1840 125 0 4 chr10 8766840 8767096 -136822192 + AluSx SINE Alu 1 255 -57 234 0 0 0 chr10 8767145 8767171 -136822117 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 2187 98 0 0 chr10 8767291 8767625 -136821663 + AluSq SINE Alu 1 334 0 483 200 56 0 chr10 8767983 8768073 -136821215 + FRAM SINE Alu 39 133 -43 1562 189 17 14 chr10 8768405 8768701 -136820587 - AluJo SINE Alu -15 297 1 200 135 0 27 chr10 8769591 8769628 -136819660 + (TTG)n Simple_repeat Simple_repeat 1 36 0 2225 109 0 3 chr10 8769938 8770232 -136819056 + AluSc SINE Alu 1 293 -16 329 287 130 0 chr10 8771188 8771296 -136817992 - L2 LINE L2 0 3313 3192 3035 166 42 5 chr10 8773634 8774200 -136815088 - L1PA16 LINE L1 -4 6162 5576 227 182 0 0 chr10 8774440 8774484 -136814804 + A-rich Low_complexity Low_complexity 3 46 0 1875 167 0 13 chr10 8776659 8776959 -136812329 + AluJo SINE Alu 1 296 -16 22 35 0 0 chr10 8777080 8777109 -136812179 + AT_rich Low_complexity Low_complexity 1 29 0 1984 181 37 5 chr10 8777159 8777589 -136811699 - L1MA9 LINE L1 -36 6276 5833 694 275 65 63 chr10 8777589 8778047 -136811241 - MLT1J LTR MaLR -4 507 49 759 280 27 43 chr10 8778281 8778538 -136810750 - MIR SINE MIR 0 262 11 624 252 8 0 chr10 8779135 8779262 -136810026 + MIR SINE MIR 5 132 -130 1961 131 57 35 chr10 8779291 8779658 -136809630 - THE1C LTR MaLR 0 375 1 468 300 81 25 chr10 8779729 8779889 -136809399 - MIR SINE MIR -74 188 20 283 363 67 0 chr10 8781499 8781634 -136807654 - MIR SINE MIR -109 153 10 233 410 8 0 chr10 8783249 8783371 -136805917 + L2 LINE L2 2866 2988 -284 266 73 24 0 chr10 8783388 8783429 -136805859 + (TTCC)n Simple_repeat Simple_repeat 2 43 0 1799 169 51 0 chr10 8783450 8783803 -136805485 - AluJb SINE Alu 0 312 113 369 0 0 0 chr10 8783803 8783844 -136805444 + (TTTAA)n Simple_repeat Simple_repeat 3 43 0 1799 169 51 0 chr10 8783844 8783964 -136805324 - AluJb SINE Alu -199 113 1 1890 197 135 11 chr10 8784746 8784973 -136804315 - MLT2B1 LTR ERVL -12 508 311 504 0 0 0 chr10 8784973 8785029 -136804259 + (GA)n Simple_repeat Simple_repeat 1 56 0 1890 197 135 11 chr10 8785029 8785253 -136804035 - MLT2B1 LTR ERVL -209 311 1 27 0 0 0 chr10 8785286 8785313 -136803975 + AT_rich Low_complexity Low_complexity 1 27 0 205 313 15 0 chr10 8785421 8785488 -136803800 + L2 LINE L2 3202 3269 -3 5337 260 95 19 chr10 8785510 8786561 -136802727 - L1MEc LINE L1 -3613 2602 1632 264 30 0 0 chr10 8786561 8786594 -136802694 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 5337 260 95 19 chr10 8786594 8787967 -136801321 - L1MEc LINE L1 -4583 1632 47 446 274 113 21 chr10 8789693 8789879 -136799409 + MIR SINE MIR 59 261 -1 231 391 115 0 chr10 8790077 8790269 -136799019 + L3b LINE CR1 1350 1563 -20 1683 180 32 42 chr10 8790529 8790907 -136798381 - MLT1A2 LTR MaLR 0 374 1 1975 119 96 94 chr10 8791083 8791510 -136797778 - MSTA LTR MaLR 0 428 1 797 243 29 9 chr10 8793762 8793972 -136795316 - MER58A DNA MER1_type -8 216 3 424 214 97 62 chr10 8795181 8795326 -136793962 + MIR SINE MIR 99 248 -14 450 79 0 0 chr10 8795755 8795818 -136793470 + (CA)n Simple_repeat Simple_repeat 2 64 0 533 295 23 29 chr10 8797422 8797595 -136791693 - MIR3 SINE MIR -7 201 30 2179 96 19 29 chr10 8797750 8798064 -136791224 - AluY SINE Alu 0 311 1 23 0 0 0 chr10 8798396 8798419 -136790869 + AT_rich Low_complexity Low_complexity 1 23 0 223 320 87 0 chr10 8798864 8798967 -136790321 - MIR SINE MIR -46 216 105 1012 249 119 21 chr10 8799191 8799660 -136789628 - L1ME1 LINE L1 -8 6158 5644 278 273 11 68 chr10 8799878 8799966 -136789322 - L2 LINE L2 -1 3271 3189 198 0 0 0 chr10 8800069 8800091 -136789197 + (TG)n Simple_repeat Simple_repeat 1 22 0 * 543 16 0 0 chr10 8800090 8800154 -136789134 + (GA)n Simple_repeat Simple_repeat 1 64 0 299 130 19 0 chr10 8800884 8800938 -136788350 + (TA)n Simple_repeat Simple_repeat 1 55 0 324 233 11 22 chr10 8800946 8801036 -136788252 + L1MC4 LINE L1 6614 6702 -1340 260 266 11 21 chr10 8801039 8801133 -136788155 + (TA)n Simple_repeat Simple_repeat 1 93 0 526 148 16 23 chr10 8801144 8801272 -136788016 + (CATATA)n Simple_repeat Simple_repeat 2 128 0 183 264 0 57 chr10 8801934 8801987 -136787301 + MIR SINE MIR 205 254 -8 455 276 56 60 chr10 8802595 8802680 -136786608 - MIR SINE MIR 0 262 178 1801 159 48 40 chr10 8802680 8803052 -136786236 - THE1C LTR MaLR 0 375 1 455 276 56 60 chr10 8803052 8803198 -136786090 - MIR SINE MIR -84 178 32 651 230 63 0 chr10 8803332 8803506 -136785782 + MER58B DNA MER1_type 1 185 -156 639 255 31 0 chr10 8803578 8803739 -136785549 + MER58B DNA MER1_type 176 341 0 561 91 0 0 chr10 8803778 8803855 -136785433 - AluSc SINE Alu -180 129 53 772 252 55 18 chr10 8803954 8804172 -136785116 + MIR SINE MIR 32 257 -5 1655 128 45 0 chr10 8804608 8804851 -136784437 - AluSc SINE Alu -3 306 53 189 171 0 0 chr10 8804963 8804998 -136784290 + G-rich Low_complexity Low_complexity 1 35 0 1715 174 31 0 chr10 8805114 8805408 -136783880 + AluJo SINE Alu 1 303 -9 567 296 6 23 chr10 8805853 8806025 -136783263 + MIR SINE MIR 48 216 -46 322 353 92 0 chr10 8806111 8806264 -136783024 - MIR SINE MIR -72 190 24 2211 103 23 10 chr10 8807466 8807767 -136781521 - AluSq SINE Alu -8 305 1 400 345 78 14 chr10 8808026 8808307 -136780981 - L1ME4a LINE L1 -265 5856 5558 207 100 0 0 chr10 8808356 8808386 -136780902 + (GAAAA)n Simple_repeat Simple_repeat 2 31 0 1605 157 27 27 chr10 8808534 8808828 -136780460 - AluJo SINE Alu -18 294 1 2015 135 0 0 chr10 8808874 8809155 -136780133 + AluSx SINE Alu 1 281 -31 243 0 0 0 chr10 8809159 8809186 -136780102 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 578 312 113 0 chr10 8809214 8809435 -136779853 - MIR SINE MIR 0 262 17 1039 242 107 0 chr10 8809463 8809807 -136779481 - L1MB7 LINE L1 0 6184 5790 22 35 0 0 chr10 8810485 8810514 -136778774 + AT_rich Low_complexity Low_complexity 1 29 0 387 0 0 0 chr10 8810538 8810581 -136778707 + (CA)n Simple_repeat Simple_repeat 2 44 0 2086 117 0 26 chr10 8811894 8812201 -136777087 - AluSx SINE Alu -12 300 2 463 300 78 120 chr10 8812641 8813080 -136776208 - L2 LINE L2 -549 2765 2354 1485 192 8 0 chr10 8813080 8813340 -136775948 - AluJb SINE Alu -8 304 43 463 300 78 120 chr10 8813340 8813466 -136775822 - L2 LINE L2 -960 2354 2224 482 238 12 93 chr10 8813955 8814127 -136775161 - MIR SINE MIR -49 213 56 2139 133 0 22 chr10 8814796 8815113 -136774175 - AluSx SINE Alu -2 310 1 227 264 19 0 chr10 8816624 8816677 -136772611 - Charlie8 DNA MER1_type -2363 54 1 398 300 53 35 chr10 8817488 8817715 -136771573 + MLT1L LTR MaLR 368 598 -17 426 304 21 42 chr10 8817854 8818045 -136771243 + MIR SINE MIR 36 222 -40 273 156 39 0 chr10 8818063 8818140 -136771148 + (TA)n Simple_repeat Simple_repeat 1 80 0 2251 87 0 10 chr10 8818140 8818429 -136770859 - AluY SINE Alu -25 286 1 426 305 35 17 chr10 8818497 8818671 -136770617 - MIR SINE MIR -77 185 9 380 303 72 31 chr10 8818760 8818958 -136770330 - MIR SINE MIR -18 244 45 213 321 0 0 chr10 8819929 8819982 -136769306 - MIR3 SINE MIR -42 166 114 631 293 64 48 chr10 8819987 8820236 -136769052 - MIR SINE MIR 0 262 10 230 0 33 0 chr10 8820374 8820404 -136768884 + (CA)n Simple_repeat Simple_repeat 2 32 0 1215 128 159 23 chr10 8820948 8821205 -136768083 + L1MC1 LINE L1 5322 5613 -720 686 111 157 0 chr10 8821206 8821314 -136767974 - FLAM_C SINE Alu -18 125 1 1626 184 3 14 chr10 8821322 8821616 -136767672 - AluJo SINE Alu 0 312 22 4040 154 33 0 chr10 8821617 8822323 -136766965 + L1MC1 LINE L1 5605 6333 0 206 374 0 0 chr10 8822539 8822630 -136766658 + (TATATG)n Simple_repeat Simple_repeat 4 94 0 300 359 49 0 chr10 8823499 8823641 -136765647 - MIR SINE MIR 0 262 114 2350 113 0 0 chr10 8823693 8824003 -136765285 - AluSx SINE Alu -2 310 1 615 335 35 19 chr10 8824188 8824445 -136764843 + MIR SINE MIR 2 262 0 350 115 16 0 chr10 8825017 8825078 -136764210 + (TTCC)n Simple_repeat Simple_repeat 2 63 0 1112 82 6 22 chr10 8825092 8825274 -136764014 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 326 286 22 0 chr10 8825282 8825373 -136763915 + CT-rich Low_complexity Low_complexity 3 95 0 213 288 17 0 chr10 8827487 8827546 -136761742 + MIR3 SINE MIR 106 165 -43 2282 119 0 0 chr10 8828393 8828686 -136760602 + AluSx SINE Alu 3 295 -17 21 0 0 0 chr10 8829122 8829143 -136760145 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr10 8830787 8830825 -136758463 + AT_rich Low_complexity Low_complexity 1 38 0 33 43 0 0 chr10 8831003 8831050 -136758238 + AT_rich Low_complexity Low_complexity 1 47 0 195 184 0 0 chr10 8833536 8833574 -136755714 + (CA)n Simple_repeat Simple_repeat 1 38 0 212 374 65 9 chr10 8834575 8834682 -136754606 - MIR SINE MIR -103 159 47 1832 197 35 12 chr10 8835371 8835755 -136753533 - MER45B DNA AcHobo -541 1040 667 198 0 0 0 chr10 8835755 8835777 -136753511 + (TA)n Simple_repeat Simple_repeat 2 23 0 2241 70 0 0 chr10 8835777 8836047 -136753241 - AluSg SINE Alu -17 293 24 1832 197 35 12 chr10 8836047 8836083 -136753205 - MER45B DNA AcHobo -913 668 609 1108 264 71 10 chr10 8836079 8836390 -136752898 - MER45B DNA AcHobo -710 330 1 * 2148 100 0 7 chr10 8836675 8836954 -136752334 + AluSq SINE Alu 1 277 -36 375 23 0 0 chr10 8836955 8836999 -136752289 + (TAA)n Simple_repeat Simple_repeat 1 44 0 1984 158 0 0 chr10 8837014 8837318 -136751970 + AluJb SINE Alu 9 312 0 484 263 0 8 chr10 8837772 8837890 -136751398 - MIR SINE MIR -10 252 136 336 222 111 46 chr10 8837887 8837970 -136751318 + MIR SINE MIR 18 111 -151 * 2594 107 3 8 chr10 8837970 8838336 -136750952 - THE1B LTR MaLR 0 364 1 336 222 111 46 chr10 8838336 8838360 -136750928 + MIR SINE MIR 111 132 -130 22 0 0 0 chr10 8838750 8838772 -136750516 + AT_rich Low_complexity Low_complexity 1 22 0 198 361 165 0 chr10 8838778 8838875 -136750413 + MIR SINE MIR 33 145 -63 1042 159 107 83 chr10 8839544 8839871 -136749417 + MSTB1 LTR MaLR 3 337 -95 373 41 0 0 chr10 8839871 8839920 -136749368 - MADE1 DNA Mariner 0 80 32 25 0 0 0 chr10 8840006 8840031 -136749257 + AT_rich Low_complexity Low_complexity 1 25 0 2372 78 0 29 chr10 8840035 8840342 -136748946 + AluSx SINE Alu 1 298 -14 803 366 62 14 chr10 8840992 8841429 -136747859 - L3 LINE CR1 -967 610 153 466 282 38 132 chr10 8841633 8842027 -136747261 - L2 LINE L2 -54 3218 2862 344 264 99 19 chr10 8843504 8843825 -136745463 + L1M4c LINE L1 1370 1882 -4621 1830 289 52 25 chr10 8844160 8845182 -136744106 + L1ME3A LINE L1 1114 2163 -4233 1529 191 66 3 chr10 8845182 8845470 -136743818 + AluJo SINE Alu 1 306 -6 1205 125 0 17 chr10 8845470 8845646 -136743642 + AluSg/x SINE Alu 132 304 -6 2157 266 43 55 chr10 8845648 8847129 -136742159 + L1ME3A LINE L1 2152 3574 -2641 557 253 43 6 chr10 8847128 8847290 -136741998 + L1ME3A LINE L1 4074 4241 -1974 * 456 171 178 79 chr10 8847332 8847484 -136741804 - MLT1B LTR MaLR -223 167 1 21 0 0 0 chr10 8847528 8847549 -136741739 + AT_rich Low_complexity Low_complexity 1 21 0 4473 59 2 0 chr10 8847559 8848118 -136741170 + L1PA7 LINE L1 5591 6150 -4 2653 216 36 43 chr10 8848121 8848425 -136740863 + L1ME1 LINE L1 5189 5493 -673 1301 192 123 18 chr10 8848425 8848701 -136740587 + AluJb SINE Alu 1 305 -7 2653 216 36 43 chr10 8848701 8849336 -136739952 + L1ME1 LINE L1 5493 6122 -44 373 283 92 6 chr10 8849432 8849605 -136739683 + L1ME3A LINE L1 4401 4588 -1627 276 91 0 0 chr10 8849658 8849702 -136739586 + (TG)n Simple_repeat Simple_repeat 1 44 0 776 270 97 58 chr10 8849769 8849863 -136739425 + L1ME3A LINE L1 4765 4854 -1385 2535 108 5 24 chr10 8849863 8850232 -136739056 - THE1B LTR MaLR 0 364 3 776 270 97 58 chr10 8850232 8851338 -136737950 + L1ME3A LINE L1 4854 6018 -221 234 0 0 0 chr10 8851608 8851634 -136737654 + (T)n Simple_repeat Simple_repeat 1 26 0 237 329 120 19 chr10 8852105 8852263 -136737025 + MIR SINE MIR 28 201 -61 2288 118 0 0 chr10 8853717 8854021 -136735267 - AluSg SINE Alu -6 304 1 848 148 8 0 chr10 8854039 8854161 -136735127 - FLAM_C SINE Alu -19 124 2 470 291 114 29 chr10 8855767 8855977 -136733311 - MIR SINE MIR -13 249 22 531 339 15 0 chr10 8856814 8857009 -136732279 + MIR SINE MIR 63 260 -2 222 160 20 20 chr10 8857265 8857315 -136731973 + GA-rich Low_complexity Low_complexity 2 51 0 180 261 22 0 chr10 8860543 8860589 -136728699 + L2 LINE L2 3263 3309 -4 * 267 305 23 69 chr10 8860582 8860713 -136728575 - MIR SINE MIR -73 189 65 2225 105 7 0 chr10 8862018 8862313 -136726975 - AluSx SINE Alu -15 297 1 414 325 48 48 chr10 8862372 8862560 -136726728 - MER5A DNA MER1_type -1 188 1 28 48 0 0 chr10 8864240 8864282 -136725006 + AT_rich Low_complexity Low_complexity 1 42 0 2077 124 0 0 chr10 8864284 8864591 -136724697 + AluSx SINE Alu 1 307 0 354 296 21 21 chr10 8864591 8864733 -136724555 + MIR SINE MIR 121 262 0 747 250 44 44 chr10 8865326 8865574 -136723714 + MIR SINE MIR 14 261 -1 2233 124 0 0 chr10 8865782 8866088 -136723200 - AluSx SINE Alu -6 306 1 489 34 0 0 chr10 8866648 8866707 -136722581 + (TTTC)n Simple_repeat Simple_repeat 3 61 0 2220 113 7 0 chr10 8867334 8867662 -136721626 - AluSc SINE Alu 0 336 7 1319 160 48 72 chr10 8867825 8868073 -136721215 + MER33 DNA MER1_type 2 242 -2343 3539 87 16 0 chr10 8868073 8868565 -136720723 - L1PA8 LINE L1 -13 6159 5660 1319 160 48 72 chr10 8868565 8868647 -136720641 + MER33 DNA MER1_type 242 324 0 217 154 26 0 chr10 8869007 8869046 -136720242 + GA-rich Low_complexity Low_complexity 1 40 0 29 0 0 0 chr10 8869234 8869263 -136720025 + AT_rich Low_complexity Low_complexity 1 29 0 2129 142 0 0 chr10 8869263 8869558 -136719730 + AluSg SINE Alu 1 295 -15 732 200 0 0 chr10 8869572 8869692 -136719596 - FLAM_C SINE Alu -23 120 1 22 0 0 0 chr10 8870716 8870738 -136718550 + AT_rich Low_complexity Low_complexity 1 22 0 260 331 65 48 chr10 8871205 8871329 -136717959 + MIR SINE MIR 20 145 -63 197 372 141 26 chr10 8871416 8871983 -136717305 - L2 LINE L2 -411 2903 2272 3192 173 28 11 chr10 8872075 8872721 -136716567 + L1MB8 LINE L1 5520 6176 -2 234 282 48 24 chr10 8872809 8872933 -136716355 + L1MEd LINE L1 2 128 -5991 720 307 115 38 chr10 8873052 8873573 -136715715 + L1MEd LINE L1 260 820 -5299 493 290 12 35 chr10 8873838 8874007 -136715281 + MIR SINE MIR 20 184 -78 341 316 95 6 chr10 8874118 8874276 -136715012 + LTR16A LTR ERVL 111 282 -168 1029 161 71 14 chr10 8875921 8876132 -136713156 + AluJb SINE Alu 90 312 0 232 271 43 0 chr10 8876864 8876934 -136712354 - MIR SINE MIR -188 74 2 632 263 75 42 chr10 8877002 8877215 -136712073 - MIR SINE MIR -33 229 10 186 304 0 0 chr10 8877234 8877280 -136712008 - L3 LINE CR1 -12 1565 1520 228 355 0 11 chr10 8877281 8877374 -136711914 - MIR SINE MIR -118 144 53 1746 148 4 11 chr10 8877593 8877870 -136711418 + AluSx SINE Alu 1 275 -37 1117 56 25 0 chr10 8877875 8878035 -136711253 + (GAAA)n Simple_repeat Simple_repeat 2 165 0 267 103 0 0 chr10 8878035 8878074 -136711214 + (CAGG)n Simple_repeat Simple_repeat 1 39 0 198 299 51 43 chr10 8879585 8879702 -136709586 - L2 LINE L2 -6 3307 3190 486 311 33 0 chr10 8880182 8880365 -136708923 + MER5A DNA MER1_type 1 189 0 2522 90 11 25 chr10 8880889 8881254 -136708034 - THE1B LTR MaLR -4 360 1 2342 154 16 102 chr10 8881312 8881812 -136707476 - LTR32 LTR ERVL 0 471 15 23 0 0 0 chr10 8883043 8883066 -136706222 + AT_rich Low_complexity Low_complexity 1 23 0 1911 147 27 0 chr10 8884725 8885018 -136704270 - AluJb SINE Alu -11 301 1 209 358 63 21 chr10 8885297 8885392 -136703896 - L2 LINE L2 -33 3280 3182 244 274 16 24 chr10 8885409 8885533 -136703755 + (TA)n Simple_repeat Simple_repeat 2 124 0 26 88 0 0 chr10 8885930 8885998 -136703290 + AT_rich Low_complexity Low_complexity 1 68 0 806 181 0 0 chr10 8886025 8886158 -136703130 - FLAM_C SINE Alu 0 133 1 426 144 0 44 chr10 8886195 8886285 -136703003 + MER53 DNA DNA 102 187 -2 221 315 63 55 chr10 8886398 8886525 -136702763 - MIR SINE MIR -132 130 3 450 224 13 90 chr10 8886871 8887027 -136702261 - MIR SINE MIR -48 214 71 181 200 0 0 chr10 8887165 8887200 -136702088 + MIR SINE MIR 73 107 -155 26 30 0 0 chr10 8888029 8888062 -136701226 + AT_rich Low_complexity Low_complexity 1 33 0 198 307 50 40 chr10 8890269 8890370 -136698918 + MIR SINE MIR 44 145 -117 550 133 80 44 chr10 8891563 8891676 -136697612 - FLAM_C SINE Alu -26 117 1 5285 138 25 7 chr10 8893125 8893970 -136695318 + L1PB4 LINE L1 4934 5811 -345 327 25 0 0 chr10 8893970 8894010 -136695278 + (CA)n Simple_repeat Simple_repeat 2 41 0 5285 138 25 7 chr10 8894010 8894355 -136694933 + L1PB4 LINE L1 5811 6148 -8 229 317 64 94 chr10 8894756 8895084 -136694204 + L2 LINE L2 2874 3191 -81 632 216 26 0 chr10 8895287 8895403 -136693885 - 5S rRNA rRNA -2 119 1 22 0 0 0 chr10 8895602 8895624 -136693664 + AT_rich Low_complexity Low_complexity 1 22 0 422 274 102 97 chr10 8895666 8896560 -136692728 - HAL1b LINE L1 -37 1311 414 22 0 0 0 chr10 8897123 8897145 -136692143 + AT_rich Low_complexity Low_complexity 1 22 0 207 0 0 0 chr10 8897908 8897931 -136691357 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 2027 101 11 14 chr10 8897933 8898209 -136691079 - AluSx SINE Alu -31 281 7 320 327 74 0 chr10 8898487 8898649 -136690639 + L1ME LINE L1 5629 5802 -319 409 253 12 0 chr10 8899786 8899948 -136689340 + (TA)n Simple_repeat Simple_repeat 2 165 0 2218 110 6 0 chr10 8899948 8900276 -136689012 + L1P5 LINE L1 5419 5748 -408 225 222 0 0 chr10 8900282 8900327 -136688961 - L1MC4 LINE L1 -1339 6703 6659 471 113 0 0 chr10 8900332 8900403 -136688885 + (CA)n Simple_repeat Simple_repeat 2 72 0 1953 154 0 3 chr10 8902444 8902756 -136686532 - AluSx SINE Alu -1 311 1 22 94 0 0 chr10 8903332 8903396 -136685892 + AT_rich Low_complexity Low_complexity 1 64 0 224 301 36 12 chr10 8903799 8903882 -136685406 - L2 LINE L2 -212 3060 2976 288 263 0 50 chr10 8903986 8904085 -136685203 - MIR SINE MIR -51 211 118 219 156 0 78 chr10 8904417 8904481 -136684807 + A-rich Low_complexity Low_complexity 2 60 0 441 0 0 0 chr10 8905339 8905388 -136683900 + (CA)n Simple_repeat Simple_repeat 2 50 0 1929 144 18 0 chr10 8905408 8905685 -136683603 - AluSx SINE Alu -30 282 1 240 357 57 21 chr10 8905785 8905925 -136683363 - L2 LINE L2 -2 3311 3167 376 316 58 23 chr10 8906084 8906258 -136683030 - MIR SINE MIR -20 242 63 1447 192 106 32 chr10 8906426 8906795 -136682493 - MLT1F LTR MaLR -4 538 143 1880 123 75 34 chr10 8906819 8907177 -136682111 - THE1C LTR MaLR -2 373 1 727 242 0 0 chr10 8909499 8909660 -136679628 - L1PB4 LINE L1 -2 6154 5994 249 57 0 0 chr10 8909721 8909756 -136679532 + (TAGA)n Simple_repeat Simple_repeat 4 38 0 29 28 0 0 chr10 8909801 8909837 -136679451 + AT_rich Low_complexity Low_complexity 1 36 0 485 247 50 119 chr10 8910789 8911033 -136678255 - MLT1A1 LTR MaLR -3 587 312 1100 145 21 21 chr10 8911061 8911254 -136678034 - MLT1A1 LTR MaLR -171 194 2 668 113 19 0 chr10 8911254 8911360 -136677928 + L1MB7 LINE L1 6069 6176 -8 375 160 32 43 chr10 8911361 8911455 -136677833 + Charlie5 DNA MER1_type 2523 2615 0 25 31 0 0 chr10 8912025 8912057 -136677231 + AT_rich Low_complexity Low_complexity 1 32 0 205 200 0 0 chr10 8912343 8912383 -136676905 + T-rich Low_complexity Low_complexity 1 40 0 1572 85 4 17 chr10 8912451 8912686 -136676602 - L1MA2 LINE L1 0 6304 6073 25 0 0 0 chr10 8913131 8913156 -136676132 + AT_rich Low_complexity Low_complexity 1 25 0 1895 152 37 37 chr10 8914486 8914861 -136674427 - THE1C LTR MaLR 0 375 1 426 300 8 8 chr10 8915437 8915567 -136673721 + MLT1L LTR MaLR 24 153 -462 617 281 88 12 chr10 8915570 8915741 -136673547 + MER5A DNA MER1_type 2 185 -4 1098 288 47 32 chr10 8915741 8916206 -136673082 + MLT1L LTR MaLR 144 615 0 315 0 0 0 chr10 8917049 8917084 -136672204 + (TTTA)n Simple_repeat Simple_repeat 1 35 0 989 113 78 0 chr10 8917084 8917225 -136672063 - AluSp SINE Alu -32 281 130 267 54 0 0 chr10 8917348 8917385 -136671903 + (T)n Simple_repeat Simple_repeat 1 37 0 966 106 8 0 chr10 8917385 8917517 -136671771 - AluSp SINE Alu -180 133 1 267 41 61 0 chr10 8917811 8917860 -136671428 + (TA)n Simple_repeat Simple_repeat 1 52 0 3529 151 27 5 chr10 8917888 8918150 -136671138 + L1PB4 LINE L1 5520 5775 -381 234 62 0 0 chr10 8918150 8918182 -136671106 + (CA)n Simple_repeat Simple_repeat 2 33 0 3529 151 27 5 chr10 8918182 8918541 -136670747 + L1PB4 LINE L1 5775 6155 -1 516 125 0 0 chr10 8918623 8918703 -136670585 + MADE1 DNA Mariner 1 80 0 236 301 43 32 chr10 8919381 8919474 -136669814 - MIR SINE MIR -15 247 154 1155 77 6 22 chr10 8919984 8920167 -136669121 + (TTC)n Simple_repeat Simple_repeat 1 180 0 610 169 22 0 chr10 8920167 8920303 -136668985 + CT-rich Low_complexity Low_complexity 4 142 0 1750 136 4 0 chr10 8920320 8920571 -136668717 - AluSp SINE Alu -23 290 39 192 125 0 0 chr10 8921096 8921128 -136668160 + (TAA)n Simple_repeat Simple_repeat 2 33 0 329 280 75 0 chr10 8921134 8921227 -136668061 - MIR SINE MIR -3 259 160 501 250 30 18 chr10 8922922 8923090 -136666198 - MER96B DNA MER1_type? -247 170 1 200 184 20 0 chr10 8923170 8923219 -136666069 + GA-rich Low_complexity Low_complexity 3 52 0 1144 62 0 0 chr10 8923262 8923408 -136665880 - L1P3 LINE L1 -595 5559 5414 3871 71 4 2 chr10 8923408 8923915 -136665373 + L1PA7 LINE L1 5627 6135 -19 1610 192 0 19 chr10 8924978 8925286 -136664002 - AluJo SINE Alu -10 302 1 2180 114 0 16 chr10 8926169 8926476 -136662812 + AluSx SINE Alu 1 302 -10 263 286 26 13 chr10 8928063 8928140 -136661148 + MIR SINE MIR 18 95 -167 243 358 36 21 chr10 8928197 8928390 -136660898 + L2 LINE L2 3118 3313 0 2379 38 7 3 chr10 8928561 8928854 -136660434 - L1PA4 LINE L1 0 6155 5862 357 211 103 51 chr10 8928854 8928951 -136660337 - FLAM_A SINE Alu -31 102 22 22 70 0 0 chr10 8929102 8929145 -136660143 + AT_rich Low_complexity Low_complexity 1 43 0 21 0 0 0 chr10 8929977 8929998 -136659290 + AT_rich Low_complexity Low_complexity 1 21 0 974 278 45 42 chr10 8930072 8930453 -136658835 + L1ME LINE L1 3 384 -5686 388 91 152 0 chr10 8931046 8931112 -136658176 + MADE1 DNA Mariner 5 80 0 409 260 179 36 chr10 8931507 8931703 -136657585 + MIR SINE MIR 13 236 -26 271 266 89 57 chr10 8931718 8931842 -136657446 - MIR SINE MIR -25 237 110 3555 77 30 10 chr10 8932267 8932774 -136656514 + L1PA13 LINE L1 5646 6162 -1 2206 123 0 0 chr10 8933780 8934082 -136655206 + AluSx SINE Alu 1 302 -10 242 217 22 0 chr10 8934366 8934412 -136654876 + AluJ/monomer SINE Alu 1 47 -256 2090 126 0 0 chr10 8934931 8935224 -136654064 + AluSc SINE Alu 1 293 -16 341 378 25 51 chr10 8935456 8935771 -136653517 - L2 LINE L2 0 3272 2966 2390 88 0 0 chr10 8938055 8938352 -136650936 + AluSg SINE Alu 1 297 -13 322 236 113 0 chr10 8938661 8938767 -136650521 - L1ME4a LINE L1 -1 6120 6003 366 316 23 0 chr10 8938962 8939136 -136650152 - L1ME4a LINE L1 -237 5884 5707 249 269 39 58 chr10 8939149 8939253 -136650035 + L2 LINE L2 3212 3313 0 228 241 0 0 chr10 8939278 8939332 -136649956 - L1ME4a LINE L1 -461 5660 5607 37 0 0 0 chr10 8939543 8939580 -136649708 + AT_rich Low_complexity Low_complexity 1 37 0 507 270 167 15 chr10 8939811 8940015 -136649273 + MIR SINE MIR 12 246 -16 207 0 0 0 chr10 8941994 8942017 -136647271 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 446 327 32 46 chr10 8942290 8942507 -136646781 + MIR SINE MIR 48 261 -1 1788 72 42 0 chr10 8942969 8943206 -136646082 - L1P4 LINE L1 -448 5713 5467 2145 101 3 0 chr10 8943210 8943520 -136645768 + AluSg SINE Alu 1 311 0 2286 124 3 3 chr10 8943522 8943876 -136645412 + L1PA14 LINE L1 5806 6159 -2 339 169 0 0 chr10 8944012 8944088 -136645200 - AluS SINE Alu -239 61 2 1509 193 3 0 chr10 8944088 8944404 -136644884 - L1M4 LINE L1 -1689 5478 5162 418 288 122 14 chr10 8944468 8944778 -136644510 - L1ME4a LINE L1 -755 5391 5143 381 318 69 11 chr10 8946004 8946240 -136643048 + MLT1J2 LTR MaLR 1 210 -240 841 369 109 3 chr10 8946535 8947168 -136642120 - L2 LINE L2 0 3313 2614 327 332 117 19 chr10 8947157 8947362 -136641926 + MIR SINE MIR 29 253 -9 * 480 301 81 35 chr10 8947716 8947889 -136641399 - MIR SINE MIR -48 214 34 7710 209 41 18 chr10 8947898 8948813 -136640475 - L1M4 LINE L1 -1953 5214 4322 441 36 0 0 chr10 8948813 8948868 -136640420 + (TG)n Simple_repeat Simple_repeat 1 55 0 1663 176 0 47 chr10 8948869 8949165 -136640123 - AluJo SINE Alu -30 282 1 7710 209 41 18 chr10 8949165 8950182 -136639106 - L1M4 LINE L1 -2844 4323 3235 225 0 0 0 chr10 8950236 8950261 -136639027 + (TG)n Simple_repeat Simple_repeat 2 26 0 1638 127 0 4 chr10 8950285 8950521 -136638767 - AluSx SINE Alu -77 235 1 3103 266 54 17 chr10 8950532 8952378 -136636910 - L1M4 LINE L1 -3944 3223 1614 499 261 67 0 chr10 8953343 8953462 -136635826 - FLAM_A SINE Alu -6 127 1 265 204 0 0 chr10 8954574 8954623 -136634665 - MIR3 SINE MIR -6 202 154 1968 121 0 16 chr10 8954784 8955098 -136634190 - L1PA13 LINE L1 -1 6162 5854 402 183 11 32 chr10 8955098 8955191 -136634097 - THE1C LTR MaLR 0 428 338 1315 141 65 43 chr10 8955296 8955573 -136633715 - THE1C LTR MaLR -91 284 2 392 154 0 0 chr10 8955574 8955639 -136633649 - L1PA13 LINE L1 -305 5858 5794 1849 149 21 0 chr10 8955641 8955929 -136633359 - AluJb SINE Alu -18 294 1 21 0 0 0 chr10 8956275 8956296 -136632992 + AT_rich Low_complexity Low_complexity 1 21 0 2170 229 105 28 chr10 8957281 8957331 -136631957 - MLT1E1 LTR MaLR 0 654 609 2825 130 16 5 chr10 8957331 8957754 -136631534 + MSTA LTR MaLR 1 428 0 2170 229 105 28 chr10 8957754 8958310 -136630978 - MLT1E1 LTR MaLR -45 609 1 206 116 23 0 chr10 8960127 8960170 -136629118 + CT-rich Low_complexity Low_complexity 1 44 0 732 199 76 28 chr10 8960211 8960462 -136628826 + MER114 LTR ERV 235 497 -151 387 0 0 0 chr10 8960732 8960775 -136628513 + (TG)n Simple_repeat Simple_repeat 2 44 0 288 214 0 0 chr10 8961811 8961867 -136627421 + MER94 DNA DNA 75 130 -4 664 333 59 71 chr10 8961877 8962453 -136626835 + MLT1K LTR MaLR 2 570 -18 2881 9 0 0 chr10 8962807 8963125 -136626163 - AluYb8 SINE Alu 0 318 1 389 283 145 0 chr10 8963227 8963372 -136625916 + MIR SINE MIR 74 239 -23 5759 67 0 0 chr10 8963594 8964357 -136624931 - L1PA6 LINE L1 -991 5155 4393 6982 51 5 5 chr10 8964357 8965349 -136623939 + L1PA6 LINE L1 5148 6136 -18 1973 150 10 0 chr10 8965911 8966218 -136623070 - AluJb SINE Alu -2 310 1 720 275 29 35 chr10 8966484 8966713 -136622575 + MIR SINE MIR 22 249 -13 223 263 53 0 chr10 8966912 8966969 -136622319 + MIR3 SINE MIR 113 172 -36 858 136 0 0 chr10 8967219 8967351 -136621937 - L1MA2 LINE L1 -1 6303 6172 1584 159 32 2 chr10 8967915 8968306 -136620982 - L1MA7 LINE L1 -1 6290 5782 246 32 0 0 chr10 8968307 8968338 -136620950 + (CA)n Simple_repeat Simple_repeat 2 32 0 268 196 20 0 chr10 8968338 8968389 -136620899 + L1M2 LINE L1 5647 5698 -593 247 130 0 0 chr10 8968459 8968505 -136620783 + LTR66 LTR ERVL 394 439 -171 314 326 0 0 chr10 8968520 8968609 -136620679 - L1MC4 LINE L1 -1340 6702 6614 * 349 292 0 0 chr10 8968530 8968619 -136620669 + L1MC4 LINE L1 6615 6703 -1339 697 206 21 21 chr10 8969055 8969244 -136620044 - MER53 DNA DNA 0 189 1 288 0 0 0 chr10 8969771 8969803 -136619485 + (CA)n Simple_repeat Simple_repeat 1 32 0 2036 129 0 3 chr10 8970243 8970537 -136618751 + AluSx SINE Alu 1 293 -19 969 192 34 24 chr10 8970848 8971056 -136618232 - MER6B DNA MER2_type 0 210 1 2107 108 0 9 chr10 8971085 8971400 -136617888 - L1PB1 LINE L1 -7 6144 5833 221 379 21 0 chr10 8971529 8971624 -136617664 - MIR SINE MIR -69 139 43 220 276 5 0 chr10 8972171 8972226 -136617062 + MIR SINE MIR 43 100 -108 423 346 33 40 chr10 8975245 8975517 -136613771 + L1ME LINE L1 46 315 -5755 684 180 66 0 chr10 8975570 8975692 -136613596 - FLAM_A SINE Alu 0 133 4 404 244 40 49 chr10 8975991 8976216 -136613072 + L1ME LINE L1 526 748 -5322 236 100 0 20 chr10 8976453 8976503 -136612785 + (CAAA)n Simple_repeat Simple_repeat 2 50 0 23 33 0 0 chr10 8977428 8977458 -136611830 + AT_rich Low_complexity Low_complexity 1 30 0 1741 138 0 0 chr10 8977460 8977714 -136611574 + AluSx SINE Alu 3 256 -56 189 0 0 0 chr10 8978699 8978720 -136610568 + (TTA)n Simple_repeat Simple_repeat 2 22 0 2106 104 0 10 chr10 8978722 8979011 -136610277 - AluY SINE Alu -23 288 3 444 305 69 42 chr10 8979266 8979528 -136609760 - MER102b DNA MER1_type -19 322 54 21 36 0 0 chr10 8980013 8980041 -136609247 + AT_rich Low_complexity Low_complexity 1 28 0 288 0 0 0 chr10 8980867 8980899 -136608389 + (CAAAAA)n Simple_repeat Simple_repeat 4 35 0 212 302 93 35 chr10 8980911 8980997 -136608291 + MIR3 SINE MIR 115 205 -3 1741 91 4 0 chr10 8981688 8981918 -136607370 + AluSq SINE Alu 73 303 -10 2447 50 0 3 chr10 8982099 8982399 -136606889 - AluY SINE Alu -12 299 1 362 340 92 57 chr10 8983590 8983629 -136605659 + L1MEd LINE L1 375 411 -5794 4598 89 1 15 chr10 8983629 8984292 -136604996 + L1PA10 LINE L1 5514 6167 -1 362 340 92 57 chr10 8984292 8984708 -136604580 + L1MEd LINE L1 411 846 -5359 24 0 0 0 chr10 8984954 8984978 -136604310 + AT_rich Low_complexity Low_complexity 1 24 0 239 263 150 0 chr10 8985070 8985150 -136604138 - MLT1D-int LTR MaLR -274 1097 1006 828 275 34 0 chr10 8985364 8985571 -136603717 - MLT1D-int LTR MaLR -493 878 665 1941 239 39 41 chr10 8985620 8986255 -136603033 - MLT1D-int LTR MaLR -711 660 27 260 188 0 0 chr10 8986264 8986312 -136602976 - MLT1D-int LTR MaLR -1323 48 1 * 2066 217 58 6 chr10 8986312 8986792 -136602496 - MLT1D LTR MaLR 0 505 1 447 285 62 7 chr10 8986792 8987056 -136602232 + L1MEd LINE L1 2112 2393 -4003 274 265 103 0 chr10 8987030 8987166 -136602122 + L1MEd LINE L1 2204 2353 -3862 * 543 275 103 31 chr10 8987140 8987500 -136601788 + L1MEd LINE L1 2204 2589 -3626 394 264 42 36 chr10 8987477 8987670 -136601618 + L1ME3A LINE L1 1455 1648 -4748 * 198 71 0 0 chr10 8987696 8987724 -136601564 + (TG)n Simple_repeat Simple_repeat 1 28 0 317 265 100 29 chr10 8987854 8988024 -136601264 + L1ME3A LINE L1 3759 3940 -2275 333 303 179 6 chr10 8988027 8988189 -136601099 + MLT1J1 LTR MaLR 13 202 -244 1119 286 26 47 chr10 8989002 8989659 -136599629 + L1ME3A LINE L1 4694 5336 -879 192 179 0 0 chr10 8989702 8989741 -136599547 + (TA)n Simple_repeat Simple_repeat 2 40 0 549 313 61 16 chr10 8989763 8990073 -136599215 + L1ME3A LINE L1 5383 5706 -527 180 0 0 0 chr10 8990077 8990097 -136599191 + (TG)n Simple_repeat Simple_repeat 2 21 0 283 191 55 9 chr10 8990108 8990218 -136599070 + (TA)n Simple_repeat Simple_repeat 1 115 0 623 260 23 6 chr10 8990235 8990412 -136598876 + L1ME3A LINE L1 5759 5938 -301 480 235 43 9 chr10 8990771 8990886 -136598402 - MER20 DNA MER1_type -4 215 97 253 254 0 15 chr10 8991402 8991469 -136597819 + CT-rich Low_complexity Low_complexity 1 66 0 237 386 101 6 chr10 8991922 8992080 -136597208 + MIR SINE MIR 39 211 -51 321 26 0 0 chr10 8992623 8992661 -136596627 + (TG)n Simple_repeat Simple_repeat 1 38 0 23 0 0 0 chr10 8994982 8995005 -136594283 + AT_rich Low_complexity Low_complexity 1 23 0 26 64 0 0 chr10 8996914 8996961 -136592327 + AT_rich Low_complexity Low_complexity 1 47 0 26 74 0 0 chr10 8999360 8999414 -136589874 + AT_rich Low_complexity Low_complexity 1 54 0 25 51 0 0 chr10 8999459 8999498 -136589790 + AT_rich Low_complexity Low_complexity 1 39 0 583 292 71 40 chr10 9000004 9000230 -136589058 - MIR SINE MIR 0 262 30 285 167 0 0 chr10 9002628 9002682 -136586606 + (TG)n Simple_repeat Simple_repeat 1 54 0 222 37 0 0 chr10 9004272 9004299 -136584989 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1946 132 6 10 chr10 9004732 9005043 -136584245 - AluSg SINE Alu 0 310 1 245 323 42 31 chr10 9005601 9005697 -136583591 - MIR SINE MIR -62 146 50 468 0 0 0 chr10 9005928 9005980 -136583308 + (TTA)n Simple_repeat Simple_repeat 3 54 0 934 94 0 0 chr10 9005980 9006107 -136583181 - L1PA7 LINE L1 -18 6136 6010 243 334 57 34 chr10 9010136 9010573 -136578715 + L1MEd LINE L1 519 965 -5154 486 317 68 100 chr10 9010840 9011358 -136577930 + L1MEd LINE L1 333 833 -5286 1957 230 65 8 chr10 9011359 9011851 -136577437 - MLT2B1 LTR ERVL 0 520 1 446 300 39 58 chr10 9011938 9012603 -136576685 + L1MEd LINE L1 925 1616 -874 513 301 14 0 chr10 9012604 9012750 -136576538 - MLT1H LTR MaLR -315 234 87 2191 121 3 3 chr10 9012890 9013195 -136576093 + AluY SINE Alu 1 305 -6 349 286 106 5 chr10 9013196 9013385 -136575903 + L1ME3A LINE L1 5730 5937 -233 302 277 138 31 chr10 9013633 9013924 -136575364 + L1ME LINE L1 5463 5588 -533 38 51 0 0 chr10 9015124 9015183 -136574105 + AT_rich Low_complexity Low_complexity 1 59 0 338 295 47 31 chr10 9015762 9015891 -136573397 + MIR SINE MIR 129 259 -3 657 102 0 0 chr10 9015922 9016020 -136573268 - AluY SINE Alu -12 299 202 2010 80 0 28 chr10 9016177 9016464 -136572824 - L1PA13 LINE L1 -11 6152 5874 1239 63 0 0 chr10 9016464 9016622 -136572666 + L1P4 LINE L1 5649 5806 -362 666 173 126 136 chr10 9017428 9017456 -136571832 - L1M4 LINE L1 -1792 4852 4825 225 65 0 0 chr10 9017456 9017487 -136571801 + (TA)n Simple_repeat Simple_repeat 1 31 0 666 173 126 136 chr10 9017487 9017759 -136571529 - L1M4 LINE L1 -1819 4825 4555 1544 231 29 21 chr10 9017775 9017905 -136571383 + MLT2C1 LTR ERVL 3 130 -267 1530 96 50 0 chr10 9017905 9018123 -136571165 - MER30 DNA MER1_type 0 230 2 1544 231 29 21 chr10 9018123 9018378 -136570910 + MLT2C1 LTR ERVL 130 391 -6 2282 248 56 20 chr10 9018386 9019175 -136570113 - L1M4 LINE L1 -2105 4539 3723 1441 156 86 78 chr10 9019465 9019837 -136569451 - THE1C LTR MaLR 0 375 1 554 258 66 56 chr10 9019888 9020175 -136569113 - L1M4 LINE L1 -6229 313 24 365 197 2 0 chr10 9020177 9020248 -136569040 + MLT1H1 LTR MaLR 476 553 -2 584 282 115 16 chr10 9020400 9020723 -136568565 + MER20B DNA MER1_type 406 760 -23 2359 102 0 0 chr10 9020752 9021055 -136568233 - AluSc SINE Alu -6 303 1 2330 11 0 0 chr10 9021247 9021512 -136567776 - L1PA2 LINE L1 0 6155 5891 2087 125 0 3 chr10 9021831 9022154 -136567134 + AluSq SINE Alu 1 322 0 291 312 186 10 chr10 9022255 9022652 -136566636 - LTR33 LTR ERVL -36 485 19 1688 171 54 6 chr10 9022965 9023281 -136566007 - MER7A DNA MER2_type -17 329 1 1150 273 85 65 chr10 9025817 9026382 -136562906 - L1ME3A LINE L1 -11 6159 5584 195 42 0 0 chr10 9027814 9027838 -136561450 + (TGAA)n Simple_repeat Simple_repeat 3 26 0 1111 231 148 13 chr10 9028071 9028374 -136560914 + MER2 DNA MER2_type 2 345 0 503 115 0 0 chr10 9028389 9028467 -136560821 + MADE1 DNA Mariner 1 78 -2 441 278 87 76 chr10 9028527 9029005 -136560283 - L2 LINE L2 -224 3089 2581 1981 136 0 14 chr10 9029005 9029331 -136559957 - AluSx SINE Alu 0 322 1 441 278 87 76 chr10 9029331 9029386 -136559902 - L2 LINE L2 -732 2581 2528 2197 119 0 3 chr10 9029393 9029695 -136559593 - AluSq SINE Alu -12 301 1 425 244 15 15 chr10 9029779 9029910 -136559378 + LTR33 LTR ERVL 388 518 -3 249 227 121 0 chr10 9029913 9029979 -136559309 + L2 LINE L2 3199 3272 0 4213 67 5 2 chr10 9030530 9031082 -136558206 + MER41A LTR ERV1 1 554 0 255 61 0 0 chr10 9031581 9031614 -136557674 + (GGAA)n Simple_repeat Simple_repeat 4 36 0 580 188 27 0 chr10 9031700 9031883 -136557405 + L1PA16 LINE L1 5936 6158 -8 23 33 0 0 chr10 9031883 9031913 -136557375 + AT_rich Low_complexity Low_complexity 1 30 0 499 204 10 0 chr10 9032575 9032673 -136556615 - LTR9 LTR ERV1 0 612 514 2870 159 12 55 chr10 9032921 9033499 -136555789 - LTR9 LTR ERV1 -57 555 3 2938 279 63 23 chr10 9034683 9036037 -136553251 + L1ME1 LINE L1 34 1442 -4954 1608 210 108 50 chr10 9036083 9036603 -136552685 - MLT1E1 LTR MaLR -10 644 95 2628 248 76 61 chr10 9036699 9038002 -136551286 + L1ME1 LINE L1 3690 5012 -1203 2193 260 40 12 chr10 9037993 9038784 -136550504 + L1ME1 LINE L1 5347 6223 -12 * 237 270 16 0 chr10 9039109 9039172 -136550116 + L2 LINE L2 3245 3308 -5 297 324 9 9 chr10 9039368 9039473 -136549815 - MIR SINE MIR -39 223 119 5716 136 29 20 chr10 9039503 9039581 -136549707 - L1MA8 LINE L1 0 6291 6215 2158 132 0 0 chr10 9039581 9039884 -136549404 + AluSx SINE Alu 1 303 -9 5716 136 29 20 chr10 9039884 9040905 -136548383 - L1MA8 LINE L1 -76 6215 5183 241 281 52 52 chr10 9042890 9043025 -136546263 - L2 LINE L2 -18 3295 3161 1434 191 44 49 chr10 9043252 9043618 -136545670 + MLT1A1 LTR MaLR 2 365 0 229 171 157 29 chr10 9044070 9044140 -136545148 - L2 LINE L2 -2 3311 3233 24 53 0 0 chr10 9044453 9044491 -136544797 + AT_rich Low_complexity Low_complexity 1 38 0 441 0 0 0 chr10 9044657 9044706 -136544582 + (TG)n Simple_repeat Simple_repeat 2 50 0 198 118 0 0 chr10 9044705 9044739 -136544549 + (TA)n Simple_repeat Simple_repeat 1 34 0 * 245 401 31 0 chr10 9045964 9046082 -136543206 + MIR SINE MIR 46 165 -65 212 328 143 17 chr10 9046097 9046216 -136543072 - MIR SINE MIR -83 179 46 2230 101 3 0 chr10 9046595 9046892 -136542396 + AluSp SINE Alu 1 298 -15 261 83 0 0 chr10 9047481 9047517 -136541771 + (A)n Simple_repeat Simple_repeat 1 36 0 348 24 0 0 chr10 9048354 9048395 -136540893 + (TC)n Simple_repeat Simple_repeat 2 42 0 25 31 0 0 chr10 9048556 9048588 -136540700 + AT_rich Low_complexity Low_complexity 1 32 0 206 32 32 0 chr10 9050473 9050504 -136538784 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 207 0 0 0 chr10 9051547 9051570 -136537718 + (TA)n Simple_repeat Simple_repeat 2 24 0 25 0 0 0 chr10 9051570 9051595 -136537693 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr10 9052316 9052344 -136536944 + AT_rich Low_complexity Low_complexity 1 28 0 29 28 0 0 chr10 9052446 9052482 -136536806 + AT_rich Low_complexity Low_complexity 1 36 0 329 259 89 13 chr10 9053129 9053353 -136535935 + L1M4 LINE L1 2800 3040 -3106 28 48 0 0 chr10 9053468 9053510 -136535778 + AT_rich Low_complexity Low_complexity 1 42 0 405 0 0 0 chr10 9053779 9053824 -136535464 + (TAGA)n Simple_repeat Simple_repeat 2 46 0 2549 61 0 6 chr10 9054240 9054553 -136534735 - AluY SINE Alu 0 311 1 22 0 0 0 chr10 9054564 9054586 -136534702 + AT_rich Low_complexity Low_complexity 1 22 0 198 0 0 0 chr10 9054896 9054918 -136534370 + (A)n Simple_repeat Simple_repeat 1 22 0 24 0 0 0 chr10 9056290 9056314 -136532974 + AT_rich Low_complexity Low_complexity 1 24 0 225 311 11 0 chr10 9056733 9056823 -136532465 + MIR SINE MIR 120 210 -52 626 226 0 8 chr10 9057072 9057196 -136532092 - FLAM_A SINE Alu -10 123 1 225 347 0 14 chr10 9059724 9059796 -136529492 + MIR SINE MIR 78 148 -60 1580 191 3 27 chr10 9060305 9060603 -136528685 + AluJo SINE Alu 1 291 -21 379 223 45 36 chr10 9060629 9060741 -136528547 - MER112 DNA MER1_type -11 249 137 278 269 36 102 chr10 9061355 9061522 -136527766 + MIR SINE MIR 59 214 -48 2172 167 80 82 chr10 9062112 9062627 -136526661 - MLT2B1 LTR ERVL -1 519 6 395 83 0 0 chr10 9062798 9062858 -136526430 - L1MA3 LINE L1 -4 6301 6242 5084 60 0 6 chr10 9063320 9063972 -136525316 + L1PA8 LINE L1 5521 6168 -4 2363 66 0 13 chr10 9064475 9064778 -136524510 - AluY SINE Alu -12 299 1 24 32 0 0 chr10 9064820 9064851 -136524437 + AT_rich Low_complexity Low_complexity 1 31 0 1001 113 251 0 chr10 9064852 9065055 -136524233 - L1MA3 LINE L1 -1 6304 6051 377 320 96 6 chr10 9065970 9066148 -136523140 + MIR SINE MIR 66 259 -3 976 232 122 41 chr10 9068375 9069012 -136520276 - HAL1 LINE L1 -874 1633 945 474 308 180 31 chr10 9069023 9069572 -136519716 - HAL1 LINE L1 -1729 778 148 2848 202 58 68 chr10 9069740 9070621 -136518667 + L1MB5 LINE L1 5294 6165 -9 1846 118 0 4 chr10 9071340 9071585 -136517703 + AluSq SINE Alu 37 280 -33 225 0 0 0 chr10 9071585 9071610 -136517678 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 33 25 0 0 chr10 9071826 9071866 -136517422 + AT_rich Low_complexity Low_complexity 1 40 0 451 370 106 12 chr10 9071973 9072303 -136516985 - L3 LINE CR1 -18 1559 1199 226 385 113 9 chr10 9072383 9072596 -136516692 - L3 LINE CR1 -839 738 504 22 0 0 0 chr10 9072628 9072650 -136516638 + AT_rich Low_complexity Low_complexity 1 22 0 197 357 14 0 chr10 9072885 9072955 -136516333 - MIR3 SINE MIR -49 159 89 344 238 88 103 chr10 9072966 9073227 -136516061 + L1MEc LINE L1 2076 2332 -4064 263 253 98 55 chr10 9073713 9074112 -136515176 + L1MEc LINE L1 2879 3294 -2921 335 318 56 28 chr10 9074517 9074876 -136514412 + L1MEc LINE L1 3808 4176 -2039 201 153 17 34 chr10 9075433 9075492 -136513796 + A-rich Low_complexity Low_complexity 3 60 0 23 54 0 0 chr10 9075746 9075783 -136513505 + AT_rich Low_complexity Low_complexity 1 37 0 226 345 12 24 chr10 9075836 9075920 -136513368 - MIR SINE MIR -89 119 37 2339 163 16 0 chr10 9076000 9076436 -136512852 + L1MA7 LINE L1 5830 6272 -19 1521 104 62 134 chr10 9077926 9078233 -136511055 - AluSx SINE Alu -17 295 11 2017 136 0 0 chr10 9079645 9079952 -136509336 + AluSq SINE Alu 1 307 0 1408 175 0 0 chr10 9080230 9080453 -136508835 - AluSg/x SINE Alu -8 304 82 186 245 21 11 chr10 9080855 9080949 -136508339 + (TA)n Simple_repeat Simple_repeat 1 95 0 318 312 0 37 chr10 9080955 9081064 -136508224 + L1MC4 LINE L1 6614 6718 -1324 270 310 60 40 chr10 9081153 9081300 -136507988 + MIR SINE MIR 33 172 -63 302 250 21 52 chr10 9081395 9081491 -136507797 - MIR3 SINE MIR -35 173 81 437 311 87 78 chr10 9081778 9082356 -136506932 - L2 LINE L2 -546 2768 2186 540 272 29 4 chr10 9083024 9083206 -136506082 + MIR SINE MIR 30 213 -49 230 56 28 0 chr10 9085822 9085858 -136503430 + (TTTTC)n Simple_repeat Simple_repeat 3 39 0 1103 116 12 0 chr10 9085863 9086027 -136503261 - AluSg/x SINE Alu -2 308 143 228 188 0 62 chr10 9086584 9086648 -136502640 + T-rich Low_complexity Low_complexity 1 60 0 180 200 0 0 chr10 9087571 9087611 -136501677 + CT-rich Low_complexity Low_complexity 1 40 0 206 362 32 0 chr10 9087842 9087936 -136501352 + MIR SINE MIR 43 139 -69 7553 23 1 3 chr10 9088476 9089885 -136499403 - L1PA4 LINE L1 -3 6152 4744 533 238 73 6 chr10 9090283 9090447 -136498841 + L1M4 LINE L1 4804 4978 -1168 23 33 0 0 chr10 9090815 9090845 -136498443 + AT_rich Low_complexity Low_complexity 1 30 0 33 25 0 0 chr10 9090926 9090966 -136498322 + AT_rich Low_complexity Low_complexity 1 40 0 40 21 0 0 chr10 9091179 9091226 -136498062 + AT_rich Low_complexity Low_complexity 1 47 0 220 205 0 0 chr10 9092461 9092500 -136496788 + CT-rich Low_complexity Low_complexity 3 41 0 320 229 83 28 chr10 9093286 9093395 -136495893 + MIR SINE MIR 30 144 -118 9358 34 16 138 chr10 9093507 9094966 -136494322 + SVA Other Other 15 1296 -90 2565 195 16 56 chr10 9095114 9095975 -136493313 + L1 LINE L1 4416 5242 -904 1588 147 4 0 chr10 9096298 9096536 -136492752 + AluSg/x SINE Alu 74 312 0 854 177 40 17 chr10 9096578 9096753 -136492535 + MER1B DNA MER1_type 107 285 -54 434 33 16 0 chr10 9096738 9096799 -136492489 + MER41B LTR ERV1 484 545 -90 * 430 16 0 0 chr10 9097623 9097685 -136491603 + AluY SINE Alu 249 310 0 437 237 108 21 chr10 9099543 9099737 -136489551 - L1MC4 LINE L1 -2 8040 7830 1001 161 28 0 chr10 9101031 9101211 -136488077 + MER5A DNA MER1_type 5 189 0 439 290 167 5 chr10 9105006 9105192 -136484096 - MIR SINE MIR 0 262 47 683 259 52 4 chr10 9106146 9106378 -136482910 + L1MEc LINE L1 36 278 -6118 1214 190 51 63 chr10 9107529 9107924 -136481364 + MLT1B LTR MaLR 1 390 0 250 188 12 35 chr10 9108764 9108888 -136480400 + (TTTA)n Simple_repeat Simple_repeat 1 121 0 26 50 0 0 chr10 9108969 9109009 -136480279 + AT_rich Low_complexity Low_complexity 1 40 0 975 94 22 22 chr10 9109254 9109435 -136479853 + SVA Other Other 687 867 -519 6282 59 30 56 chr10 9109447 9110429 -136478859 + SVA Other Other 430 1386 0 236 304 43 0 chr10 9111007 9111076 -136478212 + MIR SINE MIR 31 102 -106 2203 55 0 0 chr10 9111365 9111636 -136477652 - L1PA5 LINE L1 -17 6137 5867 23 0 0 0 chr10 9111654 9111677 -136477611 + AT_rich Low_complexity Low_complexity 1 23 0 2389 102 6 0 chr10 9112538 9112880 -136476408 - L1PA13 LINE L1 -2 6161 5818 210 145 0 48 chr10 9112999 9113061 -136476227 + (TAAAAA)n Simple_repeat Simple_repeat 1 59 0 344 0 71 0 chr10 9115496 9115552 -136473736 + (TG)n Simple_repeat Simple_repeat 2 61 0 285 75 0 0 chr10 9117383 9117423 -136471865 + (CA)n Simple_repeat Simple_repeat 1 40 0 973 268 32 52 chr10 9118612 9119015 -136470273 - MLT2C1 LTR ERVL -2 395 1 932 154 0 30 chr10 9119363 9119532 -136469756 + FRAM SINE Alu 1 164 -2 227 234 182 0 chr10 9119684 9119761 -136469527 - L1MA10 LINE L1 -8 6326 6236 2497 237 56 34 chr10 9119774 9121418 -136467870 - L1ME1 LINE L1 -117 6118 4443 1113 265 42 35 chr10 9121461 9121895 -136467393 + L1MCb LINE L1 8 444 -5601 792 267 49 4 chr10 9121894 9122141 -136467147 - L1ME1 LINE L1 -6103 293 36 * 21 57 0 0 chr10 9122504 9122539 -136466749 + AT_rich Low_complexity Low_complexity 1 35 0 205 407 47 0 chr10 9122561 9122647 -136466641 + L2 LINE L2 3140 3229 -43 2044 133 0 3 chr10 9122674 9122967 -136466321 - AluSx SINE Alu -7 305 14 23 33 0 0 chr10 9124467 9124497 -136464791 + AT_rich Low_complexity Low_complexity 1 30 0 334 268 114 24 chr10 9124599 9124722 -136464566 - L2 LINE L2 -4 3309 3176 205 208 47 104 chr10 9124782 9124888 -136464400 - L2 LINE L2 0 3313 3214 770 234 38 28 chr10 9125100 9125317 -136463971 - MLT2B2 LTR ERVL 0 515 250 676 190 69 66 chr10 9125317 9125579 -136463709 + L1MC3 LINE L1 2335 2600 -3826 2066 122 3 7 chr10 9125579 9125875 -136463413 + AluSc SINE Alu 1 295 -14 676 190 69 66 chr10 9125875 9125970 -136463318 + L1MC3 LINE L1 2600 2693 -3733 186 118 0 0 chr10 9125978 9126012 -136463276 + (TAAAAA)n Simple_repeat Simple_repeat 2 35 0 1318 221 18 49 chr10 9126012 9126500 -136462788 + L1MC3 LINE L1 3074 3546 -2880 * 9966 211 41 37 chr10 9126489 9130565 -136458723 + L1MC3 LINE L1 3969 8057 -8 1702 124 4 4 chr10 9130957 9131199 -136458089 + AluSc SINE Alu 1 242 -67 2226 216 17 4 chr10 9131439 9131911 -136457377 - MER66A LTR ERV1 0 478 1 1831 139 33 0 chr10 9132982 9133255 -136456033 - AluSx SINE Alu -28 284 3 381 262 122 67 chr10 9134070 9134234 -136455054 - MLT1J2 LTR MaLR -240 210 38 359 403 35 30 chr10 9134611 9134842 -136454446 - MIR SINE MIR -21 241 10 280 243 14 29 chr10 9135173 9135243 -136454045 - L2 LINE L2 -1 3312 3244 1603 110 27 11 chr10 9135438 9135701 -136453587 - L1PA13 LINE L1 -4 6159 5893 283 243 57 0 chr10 9136040 9136110 -136453178 + MIR SINE MIR 56 129 -79 1405 111 9 18 chr10 9136564 9136789 -136452499 + L1PA10 LINE L1 5942 6164 -4 5084 135 11 7 chr10 9137281 9138109 -136451179 - L1PA16 LINE L1 -10 6156 5326 212 0 36 0 chr10 9138237 9138265 -136451023 + (TATAA)n Simple_repeat Simple_repeat 4 32 0 2188 87 0 17 chr10 9140129 9140416 -136448872 - AluSg SINE Alu -28 282 1 484 246 41 25 chr10 9140417 9140539 -136448749 + MIR SINE MIR 63 186 -76 231 339 101 9 chr10 9140638 9140747 -136448541 + L2 LINE L2 3148 3266 -6 22 0 0 0 chr10 9141248 9141270 -136448018 + AT_rich Low_complexity Low_complexity 1 22 0 256 313 81 0 chr10 9141698 9141797 -136447491 + L2 LINE L2 3200 3306 -7 1772 222 76 40 chr10 9141945 9142110 -136447178 - L1MC4 LINE L1 -178 7864 7706 1718 170 0 42 chr10 9142110 9142416 -136446872 - AluJo SINE Alu -17 295 3 1772 222 76 40 chr10 9142416 9142827 -136446461 - L1MC4 LINE L1 -336 7706 7267 393 225 0 22 chr10 9142853 9142942 -136446346 - L1MC4 LINE L1 -749 7293 7207 45 62 0 0 chr10 9143259 9143339 -136445949 + AT_rich Low_complexity Low_complexity 1 80 0 22 35 0 0 chr10 9145385 9145414 -136443874 + AT_rich Low_complexity Low_complexity 1 29 0 3173 52 7 7 chr10 9146279 9146686 -136442602 + L1PA7 LINE L1 5737 6143 -11 22 56 0 0 chr10 9146686 9146722 -136442566 + AT_rich Low_complexity Low_complexity 1 36 0 251 326 56 11 chr10 9147280 9147369 -136441919 - L2 LINE L2 0 3272 3180 223 326 81 0 chr10 9147492 9147578 -136441710 + L2 LINE L2 3220 3312 -1 1909 95 56 0 chr10 9148589 9148874 -136440414 + L1PA10 LINE L1 5863 6163 -5 277 324 0 0 chr10 9149518 9149586 -136439702 - L2 LINE L2 0 3313 3246 21 57 0 0 chr10 9150421 9150456 -136438832 + AT_rich Low_complexity Low_complexity 1 35 0 207 0 0 0 chr10 9152384 9152407 -136436881 + (CA)n Simple_repeat Simple_repeat 2 24 0 26 64 0 0 chr10 9153404 9153451 -136435837 + AT_rich Low_complexity Low_complexity 1 47 0 1627 166 0 11 chr10 9153473 9153787 -136435501 - AluJb SINE Alu 0 327 17 1005 164 36 41 chr10 9154453 9154672 -136434616 - AluJo SINE Alu -9 303 86 2243 233 34 12 chr10 9154831 9155427 -136433861 - L1MC4a LINE L1 -155 7653 7045 231 36 0 0 chr10 9155441 9155469 -136433819 + (TTCA)n Simple_repeat Simple_repeat 3 30 0 2259 26 7 0 chr10 9155529 9155799 -136433489 - L1PA4 LINE L1 -3 6152 5881 824 236 107 23 chr10 9156430 9156978 -136432310 + L1MD2 LINE L1 5528 6161 -5 2909 156 20 0 chr10 9157000 9157501 -136431787 + L1PB4 LINE L1 5639 6149 -7 348 261 72 52 chr10 9157795 9157948 -136431340 - L2 LINE L2 0 3313 3158 2010 122 95 12 chr10 9158229 9158565 -136430723 + THE1B LTR MaLR 1 364 0 1443 186 80 0 chr10 9158617 9158905 -136430383 - AluJb SINE Alu 0 309 1 327 298 108 25 chr10 9158905 9159063 -136430225 + MIR SINE MIR 35 205 -57 313 222 32 0 chr10 9159630 9159693 -136429595 - L2 LINE L2 0 3313 3249 285 310 85 101 chr10 9159799 9160057 -136429231 - L2 LINE L2 -5 3267 3014 1076 151 0 0 chr10 9160523 9160689 -136428599 - AluSg/x SINE Alu -2 310 145 2369 73 0 3 chr10 9160898 9161198 -136428090 - AluSc SINE Alu -9 300 2 488 237 21 156 chr10 9161433 9161716 -136427572 - MIR SINE MIR -2 260 16 193 269 118 32 chr10 9162923 9163016 -136426272 - MIR SINE MIR 0 262 162 239 318 15 0 chr10 9164178 9164244 -136425044 - L2 LINE L2 -1 3271 3205 2140 125 42 28 chr10 9164269 9164628 -136424660 - THE1B LTR MaLR 0 364 1 382 233 41 34 chr10 9164840 9165090 -136424198 + MLT1H1 LTR MaLR 120 376 -214 182 337 105 0 chr10 9165279 9165374 -136423914 + MIR SINE MIR 71 175 -87 849 184 38 160 chr10 9165420 9165520 -136423768 + MER33 DNA MER1_type 1 112 -2473 1935 144 9 3 chr10 9165520 9165860 -136423428 + L1MA2 LINE L1 5963 6304 0 849 184 38 160 chr10 9165860 9166128 -136423160 + MER33 DNA MER1_type 112 324 0 4105 132 9 0 chr10 9166234 9166886 -136422402 - L1MA2 LINE L1 -15 6289 5632 1675 97 132 8 chr10 9167086 9167344 -136421944 - AluSx SINE Alu -22 290 1 22 99 0 0 chr10 9167983 9168054 -136421234 + AT_rich Low_complexity Low_complexity 1 71 0 225 159 0 0 chr10 9169678 9169722 -136419566 + (TG)n Simple_repeat Simple_repeat 2 45 0 293 186 29 43 chr10 9169914 9169984 -136419304 - L1ME4a LINE L1 -69 6052 5984 746 334 97 45 chr10 9170213 9170719 -136418569 - L2 LINE L2 -31 3282 2804 1647 167 7 33 chr10 9170719 9171025 -136418263 - AluJo SINE Alu -13 299 2 746 334 97 45 chr10 9171025 9171300 -136417988 - L2 LINE L2 -509 2804 2451 1255 175 54 35 chr10 9171300 9171614 -136417674 - MER33 DNA MER1_type 0 324 5 746 334 97 45 chr10 9171614 9171790 -136417498 - L2 LINE L2 -862 2451 2286 328 315 68 25 chr10 9171794 9172115 -136417173 - L1ME4a LINE L1 -304 5817 5483 269 377 51 55 chr10 9172957 9173448 -136415840 - L2 LINE L2 -340 2974 2486 389 161 11 0 chr10 9173809 9173896 -136415392 + (TAGA)n Simple_repeat Simple_repeat 3 90 0 1301 197 38 112 chr10 9174163 9174584 -136414704 - MLT1B LTR MaLR 0 390 1 2075 109 0 3 chr10 9174590 9174893 -136414395 + AluSq SINE Alu 1 302 0 314 274 9 19 chr10 9174910 9175016 -136414272 + (TATATG)n Simple_repeat Simple_repeat 2 106 0 780 103 46 17 chr10 9175577 9175752 -136413536 + CT-rich Low_complexity Low_complexity 1 180 0 2055 108 16 10 chr10 9175765 9176071 -136413217 - AluSg SINE Alu -1 309 2 2865 240 68 48 chr10 9176117 9176168 -136413120 - L1ME1 LINE L1 -5 6161 6113 1176 183 99 56 chr10 9176168 9176490 -136412798 - MER44D DNA MER2_type -2 607 2 2865 240 68 48 chr10 9176490 9177879 -136411409 - L1ME1 LINE L1 -53 6113 4687 195 360 114 0 chr10 9177896 9178010 -136411278 - MIR SINE MIR -26 236 110 4914 236 50 50 chr10 9178043 9180223 -136409065 + L1MDa LINE L1 889 3158 -3382 4045 167 6 4 chr10 9180223 9180925 -136408363 - L1PA16 LINE L1 -1 6165 5463 4914 236 50 50 chr10 9180925 9182066 -136407222 + L1MDa LINE L1 3158 4297 -2243 1385 148 4 18 chr10 9182066 9182295 -136406993 - AluJb SINE Alu -86 226 1 1016 246 54 22 chr10 9182322 9182599 -136406689 + L1MDa LINE L1 4346 4631 -1909 498 146 64 27 chr10 9182608 9182718 -136406570 + L1MD2 LINE L1 6246 6359 0 496 44 0 0 chr10 9182736 9182825 -136406463 + L1PA3 LINE L1 6087 6175 0 25 83 0 0 chr10 9183291 9183351 -136405937 + AT_rich Low_complexity Low_complexity 1 60 0 263 323 31 8 chr10 9183387 9183517 -136405771 + L1MEc LINE L1 70 202 -6194 349 329 40 22 chr10 9183855 9184083 -136405205 + L1MEc LINE L1 638 869 -5527 210 71 0 0 chr10 9184249 9184277 -136405011 + (TTTTA)n Simple_repeat Simple_repeat 1 28 0 883 318 112 33 chr10 9184676 9185248 -136404040 - L2 LINE L2 -577 2737 2121 2680 186 40 20 chr10 9185702 9186309 -136402979 - L1 LINE L1 -1902 4244 3626 438 250 35 0 chr10 9187815 9187931 -136401357 - MER94 DNA DNA -12 122 3 2866 130 77 83 chr10 9187990 9188629 -136400659 + MER41B LTR ERV1 1 635 0 23 0 0 0 chr10 9189865 9189888 -136399400 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr10 9191009 9191034 -136398254 + AT_rich Low_complexity Low_complexity 1 25 0 951 88 15 0 chr10 9191063 9191200 -136398088 - L1PB2 LINE L1 -7 6144 6006 1511 182 19 4 chr10 9191200 9191464 -136397824 - AluJb SINE Alu -44 268 1 403 348 82 16 chr10 9192255 9192499 -136396789 - MIR SINE MIR 0 262 3 303 28 0 0 chr10 9193900 9193936 -136395352 + (TCTA)n Simple_repeat Simple_repeat 3 38 0 22 35 0 0 chr10 9194737 9194766 -136394522 + AT_rich Low_complexity Low_complexity 1 29 0 4960 79 138 18 chr10 9195065 9195260 -136394028 + L1PA10 LINE L1 5298 5468 -700 2112 128 3 0 chr10 9195260 9195556 -136393732 + AluSq SINE Alu 1 297 -16 4960 79 138 18 chr10 9195556 9196136 -136393152 + L1PA10 LINE L1 5468 6166 -2 212 200 22 0 chr10 9196354 9196399 -136392889 + A-rich Low_complexity Low_complexity 5 50 0 207 213 21 21 chr10 9196613 9196660 -136392628 - L2 LINE L2 -2 3311 3265 423 202 0 0 chr10 9197035 9197144 -136392144 + (CA)n Simple_repeat Simple_repeat 2 110 0 1239 241 116 7 chr10 9197596 9198010 -136391278 - MLT1C LTR MaLR -8 459 1 858 88 0 0 chr10 9198585 9198744 -136390544 - L1PA8 LINE L1 -11 6161 6027 1750 131 53 3 chr10 9198847 9198972 -136390316 + AluSx SINE Alu 1 118 -194 459 0 0 0 chr10 9198972 9199023 -136390265 + (CA)n Simple_repeat Simple_repeat 2 52 0 1750 131 53 3 chr10 9199023 9199179 -136390109 + AluSx SINE Alu 118 296 -16 396 286 127 45 chr10 9199238 9199483 -136389805 + L1ME LINE L1 5408 5672 -449 247 211 0 0 chr10 9199547 9199599 -136389689 + L1ME LINE L1 5757 5808 -356 468 197 0 63 chr10 9199760 9199887 -136389401 + L1ME1 LINE L1 4562 4680 -1466 2010 135 0 3 chr10 9199970 9200307 -136388981 + AluSq SINE Alu 1 313 0 242 240 80 0 chr10 9200553 9200653 -136388635 + L1ME1 LINE L1 5122 5229 -917 391 317 88 4 chr10 9200672 9200934 -136388354 + L1M2 LINE L1 5256 5539 -761 383 256 74 17 chr10 9200930 9201106 -136388182 + L1ME1 LINE L1 5711 5896 -274 * 1061 228 26 98 chr10 9201140 9201526 -136387762 - MLT1A2 LTR MaLR -16 358 1 6394 89 4 2 chr10 9203251 9204276 -136385012 + L1PA14 LINE L1 5121 6156 -5 22 0 0 0 chr10 9204282 9204304 -136384984 + AT_rich Low_complexity Low_complexity 1 22 0 324 269 53 58 chr10 9204522 9204693 -136384595 + MLT1J2 LTR MaLR 280 449 -1 286 369 114 23 chr10 9204740 9205003 -136384285 + L3 LINE CR1 68 354 -1223 233 325 117 8 chr10 9205311 9205431 -136383857 - MIR SINE MIR -129 133 1 1786 296 143 11 chr10 9206028 9206744 -136382544 - L2 LINE L2 -446 2868 2059 21 0 0 0 chr10 9207108 9207129 -136382159 + AT_rich Low_complexity Low_complexity 1 21 0 1497 122 0 14 chr10 9208828 9209042 -136380246 - AluSg SINE Alu -99 211 1 24 53 0 0 chr10 9209049 9209087 -136380201 + AT_rich Low_complexity Low_complexity 1 38 0 180 313 91 40 chr10 9209098 9209197 -136380091 - L3b LINE CR1 -189 1394 1291 545 288 9 39 chr10 9209278 9209342 -136379946 + L1ME1 LINE L1 5919 5983 -183 2249 146 5 19 chr10 9209342 9209711 -136379577 - THE1B LTR MaLR 0 364 1 545 288 9 39 chr10 9209711 9209879 -136379409 + L1ME1 LINE L1 5983 6144 -22 247 215 9 28 chr10 9209895 9210002 -136379286 + (TA)n Simple_repeat Simple_repeat 2 106 0 384 302 145 35 chr10 9210462 9210717 -136378571 + MLT1I LTR MaLR 21 303 -106 1346 278 16 5 chr10 9210726 9211108 -136378180 - L2 LINE L2 -693 2621 2236 637 325 43 9 chr10 9214085 9214316 -136374972 + MIR SINE MIR 24 262 0 2051 143 0 6 chr10 9214440 9214754 -136374534 - AluSx SINE Alu 0 312 1 186 71 0 0 chr10 9214881 9214909 -136374379 + (TA)n Simple_repeat Simple_repeat 1 28 0 180 0 0 0 chr10 9215054 9215074 -136374214 + (TG)n Simple_repeat Simple_repeat 2 21 0 2064 138 0 0 chr10 9215421 9215712 -136373576 - AluSx SINE Alu -20 292 2 520 154 24 49 chr10 9215993 9216116 -136373172 - L1MC2 LINE L1 0 6344 6225 466 284 100 15 chr10 9216447 9216718 -136372570 + LTR33A LTR ERVL 230 523 0 261 0 0 0 chr10 9216767 9216796 -136372492 + (A)n Simple_repeat Simple_repeat 1 29 0 306 254 56 63 chr10 9217325 9217451 -136371837 + L2 LINE L2 3189 3313 0 789 205 0 26 chr10 9217595 9217751 -136371537 + FRAM SINE Alu 1 152 -24 22 0 0 0 chr10 9218707 9218729 -136370559 + AT_rich Low_complexity Low_complexity 1 22 0 308 240 124 41 chr10 9220209 9220330 -136368958 - MIR SINE MIR -62 200 70 216 354 0 76 chr10 9220375 9220519 -136368769 + L2 LINE L2 3139 3271 -1 734 172 0 51 chr10 9221646 9221803 -136367485 + AluJo SINE Alu 39 187 -125 194 105 26 0 chr10 9222797 9222835 -136366453 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 2089 124 0 3 chr10 9223056 9223346 -136365942 - AluSg SINE Alu -21 289 1 5009 32 0 0 chr10 9224115 9224713 -136364575 - L1PA3 LINE L1 -1046 5100 4503 7835 14 0 0 chr10 9224713 9225737 -136363551 + L1PA3 LINE L1 5132 6155 0 626 37 86 12 chr10 9225922 9226077 -136363211 + (TA)n Simple_repeat Simple_repeat 1 170 -4 1712 161 4 18 chr10 9226077 9226356 -136362932 - AluJb SINE Alu -37 275 1 626 37 86 12 chr10 9226356 9226362 -136362926 + (TA)n Simple_repeat Simple_repeat 170 174 0 25 51 0 0 chr10 9228954 9228993 -136360295 + AT_rich Low_complexity Low_complexity 1 39 0 201 211 0 0 chr10 9229356 9229408 -136359880 + GA-rich Low_complexity Low_complexity 2 53 0 380 111 44 0 chr10 9230042 9230132 -136359156 + (TA)n Simple_repeat Simple_repeat 1 94 0 241 295 62 36 chr10 9230255 9230367 -136358921 - MIR SINE MIR -48 214 100 29 0 0 0 chr10 9231665 9231694 -136357594 + AT_rich Low_complexity Low_complexity 1 29 0 2601 161 9 17 chr10 9232153 9232619 -136356669 + MLT1C LTR MaLR 1 462 -5 181 296 0 0 chr10 9232962 9233006 -136356282 + MIR3 SINE MIR 116 159 -49 392 0 21 0 chr10 9233298 9233346 -136355942 + (TG)n Simple_repeat Simple_repeat 2 50 0 3001 196 41 17 chr10 9233388 9234040 -136355248 - L1MD1 LINE L1 0 6242 5575 442 266 62 0 chr10 9234041 9234169 -136355119 + L1MD1 LINE L1 5408 5543 -699 2633 226 41 22 chr10 9234318 9234959 -136354329 - MER82 DNA MER2_type 0 653 1 245 218 18 0 chr10 9235128 9235183 -136354105 - L1MC/D LINE L1 -397 5845 5790 2331 83 0 10 chr10 9235232 9235534 -136353754 + AluY SINE Alu 1 299 -12 256 284 12 0 chr10 9237914 9237995 -136351293 + MIR3 SINE MIR 125 206 -2 234 233 0 0 chr10 9238203 9238263 -136351025 + CT-rich Low_complexity Low_complexity 2 61 0 270 294 29 0 chr10 9238270 9238338 -136350950 - L2 LINE L2 -17 3255 3186 2120 122 0 0 chr10 9238362 9238650 -136350638 - AluSx SINE Alu -24 288 1 475 355 59 16 chr10 9238792 9239164 -136350124 - L2 LINE L2 -455 2859 2472 355 312 18 59 chr10 9240300 9240470 -136348818 + L3 LINE CR1 854 1016 -561 1900 139 20 0 chr10 9240720 9241021 -136348267 + AluSx SINE Alu 1 307 -5 21 0 0 0 chr10 9241395 9241416 -136347872 + AT_rich Low_complexity Low_complexity 1 21 0 2300 50 4 4 chr10 9241848 9242127 -136347161 + AluY SINE Alu 1 279 -32 308 24 0 24 chr10 9242128 9242170 -136347118 + (GAAAA)n Simple_repeat Simple_repeat 2 42 0 240 183 73 73 chr10 9242174 9242256 -136347032 - L2 LINE L2 -12 3260 3179 229 70 23 0 chr10 9242274 9242317 -136346971 - Alu SINE Alu 0 300 257 1180 256 61 28 chr10 9242744 9243205 -136346083 + L1M4 LINE L1 2281 2756 -3390 3961 176 6 6 chr10 9243237 9243934 -136345354 - L1PA16 LINE L1 -7 6159 5463 2523 245 52 50 chr10 9243932 9245074 -136344214 + L1M4 LINE L1 2759 3903 -2243 * 1408 148 4 18 chr10 9245074 9245303 -136343985 - AluJb SINE Alu -86 226 1 697 233 24 38 chr10 9245329 9245539 -136343749 + L1M4 LINE L1 3950 4156 -1990 306 185 25 37 chr10 9245616 9245697 -136343591 + L1MD1 LINE L1 6131 6210 -32 405 0 0 0 chr10 9246051 9246096 -136343192 + (TG)n Simple_repeat Simple_repeat 1 45 0 2296 69 10 0 chr10 9246192 9246481 -136342807 - AluY SINE Alu -15 296 5 26 50 0 0 chr10 9246495 9246535 -136342753 + AT_rich Low_complexity Low_complexity 1 40 0 201 288 0 17 chr10 9246683 9246742 -136342546 + CT-rich Low_complexity Low_complexity 4 61 0 34 24 0 0 chr10 9246755 9246796 -136342492 + AT_rich Low_complexity Low_complexity 1 41 0 23 0 0 0 chr10 9249974 9249997 -136339291 + AT_rich Low_complexity Low_complexity 1 23 0 306 290 113 8 chr10 9250515 9250639 -136338649 + L2 LINE L2 3173 3309 -4 28 29 0 0 chr10 9251059 9251094 -136338194 + AT_rich Low_complexity Low_complexity 1 35 0 407 259 69 8 chr10 9251284 9251415 -136337873 + MIR SINE MIR 124 262 0 297 0 0 0 chr10 9251619 9251652 -136337636 + (TA)n Simple_repeat Simple_repeat 2 34 0 * 336 24 0 0 chr10 9251651 9251692 -136337596 + (GA)n Simple_repeat Simple_repeat 2 42 0 2207 116 3 3 chr10 9252900 9253210 -136336078 - AluSx SINE Alu 0 312 3 297 0 0 0 chr10 9253891 9253924 -136335364 + (CA)n Simple_repeat Simple_repeat 2 34 0 23 33 0 0 chr10 9254538 9254568 -136334720 + AT_rich Low_complexity Low_complexity 1 30 0 1017 185 0 0 chr10 9254951 9255129 -136334159 - AluJb SINE Alu -5 307 130 239 164 36 0 chr10 9255827 9255882 -136333406 + GA-rich Low_complexity Low_complexity 2 58 0 182 356 58 0 chr10 9255974 9256061 -136333227 + MIR3 SINE MIR 87 178 -30 21 0 0 0 chr10 9257321 9257342 -136331946 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr10 9259068 9259096 -136330192 + AT_rich Low_complexity Low_complexity 1 28 0 216 319 124 0 chr10 9260655 9260768 -136328520 + MIR SINE MIR 20 146 -62 21 57 0 0 chr10 9263329 9263364 -136325924 + AT_rich Low_complexity Low_complexity 1 35 0 243 0 0 0 chr10 9264321 9264348 -136324940 + (A)n Simple_repeat Simple_repeat 1 27 0 273 57 0 0 chr10 9264589 9264624 -136324664 + (TC)n Simple_repeat Simple_repeat 2 36 0 321 26 0 0 chr10 9264624 9264662 -136324626 + (CA)n Simple_repeat Simple_repeat 1 38 0 27 0 0 0 chr10 9264662 9264689 -136324599 + AT_rich Low_complexity Low_complexity 1 27 0 453 311 52 52 chr10 9265456 9265668 -136323620 + MIR SINE MIR 15 226 -36 21 36 0 0 chr10 9265988 9266016 -136323272 + AT_rich Low_complexity Low_complexity 1 28 0 642 299 49 47 chr10 9268559 9268924 -136320364 - L1MC/D LINE L1 -2099 5709 5344 336 306 47 57 chr10 9268956 9269149 -136320139 - MIR SINE MIR -70 192 2 22 0 0 0 chr10 9269184 9269206 -136320082 + AT_rich Low_complexity Low_complexity 1 22 0 237 325 65 0 chr10 9269230 9269307 -136319981 - L2 LINE L2 -3 3310 3229 241 194 30 30 chr10 9270098 9270165 -136319123 + MER116 DNA Mariner 1 67 -13 1768 100 0 0 chr10 9270372 9270603 -136318685 + AluSx SINE Alu 1 231 -81 590 99 41 8 chr10 9270631 9270752 -136318536 + GA-rich Low_complexity Low_complexity 4 128 0 31 44 0 0 chr10 9270898 9270943 -136318345 + AT_rich Low_complexity Low_complexity 1 45 0 305 340 77 19 chr10 9271412 9271568 -136317720 + MIR SINE MIR 57 221 -41 27 49 0 0 chr10 9272909 9272950 -136316338 + AT_rich Low_complexity Low_complexity 1 41 0 180 0 0 0 chr10 9273026 9273046 -136316242 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 960 43 0 0 chr10 9273048 9273164 -136316124 - AluY SINE Alu -31 280 165 204 234 0 43 chr10 9273814 9273861 -136315427 + polypyrimidine Low_complexity Low_complexity 4 48 0 1134 261 23 3 chr10 9273938 9274237 -136315051 - L1MC/D LINE L1 -986 5160 4856 2073 192 34 9 chr10 9274249 9274791 -136314497 + L1MA9 LINE L1 4886 5436 -743 1069 148 99 0 chr10 9274794 9274996 -136314292 + L1MA6 LINE L1 6073 6294 -6 3776 145 72 65 chr10 9275086 9275830 -136313458 + L1MA9 LINE L1 5417 6169 -143 360 0 0 0 chr10 9275830 9275870 -136313418 + (CA)n Simple_repeat Simple_repeat 1 40 0 3776 145 72 65 chr10 9275870 9275995 -136313293 + L1MA9 LINE L1 6169 6292 -20 25 31 0 0 chr10 9276011 9276043 -136313245 + AT_rich Low_complexity Low_complexity 1 32 0 518 281 63 53 chr10 9276081 9276397 -136312891 + MER34 LTR ERV1 9 530 -177 5056 178 73 57 chr10 9276397 9276926 -136312362 + L1MCa LINE L1 281 800 -5626 270 0 0 0 chr10 9276926 9276956 -136312332 + (CAA)n Simple_repeat Simple_repeat 1 30 0 5056 178 73 57 chr10 9276956 9276981 -136312307 + L1MCa LINE L1 800 823 -5603 303 28 0 0 chr10 9276981 9277017 -136312271 + (TAAAA)n Simple_repeat Simple_repeat 2 37 0 5056 178 73 57 chr10 9277017 9277714 -136311574 + L1MCa LINE L1 823 1553 -4873 887 241 4 9 chr10 9277706 9277934 -136311354 + L1M4 LINE L1 3909 4135 -2011 * 254 226 97 0 chr10 9279127 9279189 -136310099 - MER63 DNA MER1_type -16 1045 978 264 219 14 41 chr10 9279348 9279421 -136309867 - MER103 DNA DNA -79 87 17 671 296 43 17 chr10 9279464 9279697 -136309591 + MIR SINE MIR 11 249 -13 446 298 60 38 chr10 9280543 9280942 -136308346 + L1ME LINE L1 534 941 -5129 * 1121 241 46 20 chr10 9280940 9281396 -136307892 + L1ME LINE L1 2793 3260 -2820 847 265 58 0 chr10 9281449 9281706 -136307582 + L1ME LINE L1 3537 3808 -2272 1755 215 35 8 chr10 9283003 9283380 -136305908 - MLT1B LTR MaLR 0 390 4 370 264 0 0 chr10 9283910 9283997 -136305291 - L2 LINE L2 0 3272 3186 666 311 104 32 chr10 9284661 9285305 -136303983 + L2 LINE L2 2549 3206 -107 205 169 26 65 chr10 9288092 9288169 -136301119 + CT-rich Low_complexity Low_complexity 5 78 0 5370 172 29 18 chr10 9288408 9289754 -136299534 - L1PA16 LINE L1 -10 6156 4778 1463 209 14 3 chr10 9289754 9290050 -136299238 - AluJb SINE Alu -8 304 6 5370 172 29 18 chr10 9290050 9290548 -136298740 - L1PA16 LINE L1 -1388 4778 4287 21 0 0 0 chr10 9290674 9290695 -136298593 + AT_rich Low_complexity Low_complexity 1 21 0 440 326 73 22 chr10 9290725 9291038 -136298250 + L1MC4a LINE L1 5583 5911 -1897 329 302 135 75 chr10 9291226 9291298 -136297990 + HAL1 LINE L1 4 70 -2437 1652 241 39 22 chr10 9291298 9291792 -136297496 - MLT1D LTR MaLR 0 505 4 329 302 135 75 chr10 9291792 9292090 -136297198 + HAL1 LINE L1 70 396 -2111 999 192 35 13 chr10 9292114 9292343 -136296945 - L1 LINE L1 -1478 4668 4435 4689 183 32 34 chr10 9292910 9294784 -136294504 + L1MA9 LINE L1 4436 6310 -2 22 0 0 0 chr10 9294892 9294914 -136294374 + AT_rich Low_complexity Low_complexity 1 22 0 568 274 129 35 chr10 9295146 9295605 -136293683 + L2 LINE L2 2631 3133 -180 292 343 10 18 chr10 9295719 9295877 -136293411 - MIR SINE MIR -23 185 31 1886 253 92 29 chr10 9296003 9296302 -136292986 - L1ME1 LINE L1 -63 6172 5893 3153 136 10 0 chr10 9296302 9296794 -136292494 - LOR1a LTR ERV1 0 497 1 1886 253 92 29 chr10 9296794 9297264 -136292024 - L1ME1 LINE L1 -342 5893 5354 23 0 0 0 chr10 9297298 9297321 -136291967 + AT_rich Low_complexity Low_complexity 1 23 0 1344 243 147 16 chr10 9297337 9297982 -136291306 - L1ME1 LINE L1 -872 5343 4614 1264 266 55 9 chr10 9297983 9298441 -136290847 - L1ME1 LINE L1 -2120 4095 3617 237 171 86 14 chr10 9298440 9298510 -136290778 - L1M4 LINE L1 -355 5823 5749 * 347 176 83 46 chr10 9298619 9298727 -136290561 - L1ME1 LINE L1 -2904 3311 3200 21 57 0 0 chr10 9298813 9298848 -136290440 + AT_rich Low_complexity Low_complexity 1 35 0 640 230 15 31 chr10 9298860 9299056 -136290232 - L1ME1 LINE L1 -4628 1768 1576 244 180 0 33 chr10 9299053 9299114 -136290174 - L1MA10 LINE L1 -2 6332 6274 * 3671 181 53 16 chr10 9299110 9299401 -136289887 - L1MA9 LINE L1 -224 6088 5809 387 0 0 0 chr10 9299401 9299444 -136289844 + (TA)n Simple_repeat Simple_repeat 2 44 0 3671 181 53 16 chr10 9299444 9299740 -136289548 - L1MA9 LINE L1 -503 5809 5525 198 0 0 0 chr10 9299740 9299762 -136289526 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 3671 181 53 16 chr10 9299762 9300001 -136289287 - L1MA9 LINE L1 -787 5525 5231 674 171 6 57 chr10 9299999 9300174 -136289114 + L1 LINE L1 4553 4718 -1428 * 650 228 40 61 chr10 9300174 9300402 -136288886 + pTR5 LTR ERV1 743 965 -1473 4540 105 46 75 chr10 9300481 9301332 -136287956 + LTR12 LTR ERV1 1 826 0 1022 153 20 44 chr10 9301332 9301535 -136287753 + L1 LINE L1 4715 4912 -1234 2084 112 3 26 chr10 9301688 9302001 -136287287 - AluSx SINE Alu -6 306 1 334 294 176 78 chr10 9302131 9302145 -136287143 + L2 LINE L2 2306 2317 -997 1025 262 62 53 chr10 9302145 9302595 -136286693 + LTR16A1 LTR ERVL 1 454 -3 334 294 176 78 chr10 9302595 9302927 -136286361 + L2 LINE L2 2317 2686 -628 884 44 0 0 chr10 9303174 9303288 -136286000 + L1PA6 LINE L1 6041 6154 0 678 190 0 8 chr10 9303419 9303540 -136285748 - FLAM_C SINE Alu -17 126 7 21 57 0 0 chr10 9303632 9303667 -136285621 + AT_rich Low_complexity Low_complexity 1 35 0 220 269 0 0 chr10 9306229 9306281 -136283007 + (CA)n Simple_repeat Simple_repeat 2 53 0 2256 89 7 0 chr10 9306873 9307165 -136282123 + AluSc SINE Alu 1 294 -15 354 323 78 5 chr10 9307198 9307379 -136281909 + MIR SINE MIR 20 218 -44 725 164 0 0 chr10 9307564 9307680 -136281608 - AluJb SINE Alu -196 116 1 325 348 28 14 chr10 9309230 9309371 -136279917 + MIR3 SINE MIR 41 183 -25 247 268 141 56 chr10 9310139 9310281 -136279007 - MIR3 SINE MIR -1 207 54 611 331 50 4 chr10 9310393 9310653 -136278635 - L2 LINE L2 -341 2973 2702 976 235 15 0 chr10 9310673 9310877 -136278411 - MER58A DNA MER1_type -16 208 2 328 200 0 13 chr10 9310882 9310957 -136278331 - L2 LINE L2 -615 2699 2626 573 55 0 0 chr10 9311131 9311204 -136278084 + (TTCC)n Simple_repeat Simple_repeat 4 76 0 1993 112 7 0 chr10 9311225 9311521 -136277767 - AluSp SINE Alu -15 298 1 2112 107 7 3 chr10 9312504 9312804 -136276484 + AluSx SINE Alu 1 301 -11 26 30 0 0 chr10 9313378 9313411 -136275877 + AT_rich Low_complexity Low_complexity 1 33 0 252 77 0 0 chr10 9313684 9313723 -136275565 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 6537 76 12 5 chr10 9313724 9314687 -136274601 - L1PA8 LINE L1 -24 6148 5180 3358 127 45 7 chr10 9314663 9315213 -136274075 + L1P LINE L1 3780 4350 -1796 * 658 53 11 0 chr10 9315248 9315342 -136273946 - L1PA13 LINE L1 -3 6160 6066 270 0 0 0 chr10 9315599 9315629 -136273659 + (TG)n Simple_repeat Simple_repeat 2 31 0 530 55 44 0 chr10 9316094 9316185 -136273103 + (TCTA)n Simple_repeat Simple_repeat 4 98 0 204 200 0 0 chr10 9317421 9317461 -136271827 + GA-rich Low_complexity Low_complexity 2 41 0 249 108 0 0 chr10 9317865 9317902 -136271386 + (TG)n Simple_repeat Simple_repeat 1 37 0 25 51 0 0 chr10 9318152 9318191 -136271097 + AT_rich Low_complexity Low_complexity 1 39 0 196 168 53 18 chr10 9318318 9318431 -136270857 + (TA)n Simple_repeat Simple_repeat 2 118 0 237 192 24 48 chr10 9318442 9318567 -136270721 + (TA)n Simple_repeat Simple_repeat 1 122 0 23 33 0 0 chr10 9318808 9318838 -136270450 + AT_rich Low_complexity Low_complexity 1 30 0 276 258 116 111 chr10 9320392 9320617 -136268671 - L2 LINE L2 0 3313 3088 212 361 18 54 chr10 9320635 9320801 -136268487 - L2 LINE L2 -445 2869 2710 6249 78 29 3 chr10 9320801 9321712 -136267576 + L1PA7 LINE L1 5223 6155 0 263 325 24 29 chr10 9321712 9321918 -136267370 + HAL1b LINE L1 378 582 -766 276 271 44 92 chr10 9322070 9322321 -136266967 + L1MC5 LINE L1 7289 7527 -434 357 333 46 6 chr10 9322427 9322601 -136266687 + L1ME3A LINE L1 5990 6170 0 325 284 82 22 chr10 9323284 9323418 -136265870 + MIR SINE MIR 51 192 -70 305 339 92 30 chr10 9323577 9323872 -136265416 - L1ME4a LINE L1 -184 5937 5625 1608 201 7 3 chr10 9325020 9325329 -136263959 + AluJb SINE Alu 1 310 0 219 316 53 42 chr10 9326347 9326442 -136262846 - L2 LINE L2 -21 3292 3197 377 317 129 12 chr10 9326583 9326970 -136262318 - L2 LINE L2 -407 2907 2413 1226 301 22 26 chr10 9326980 9327354 -136261934 + L2 LINE L2 2347 2720 -594 2214 117 0 0 chr10 9327354 9327653 -136261635 + AluSg SINE Alu 1 299 -11 1226 301 22 26 chr10 9327653 9327740 -136261548 + L2 LINE L2 2720 2806 -508 287 296 136 30 chr10 9327772 9327971 -136261317 - L2 LINE L2 -961 2353 2134 574 288 127 76 chr10 9327971 9328459 -136260829 + MLT1E LTR MaLR 1 558 -9 352 262 23 113 chr10 9328610 9328866 -136260422 - L2 LINE L2 -1819 1495 1263 2043 118 14 0 chr10 9329472 9329772 -136259516 + AluSx SINE Alu 1 304 0 218 385 10 26 chr10 9329775 9329967 -136259321 + L2 LINE L2 1767 1955 -1359 184 235 118 24 chr10 9330359 9330444 -136258844 + L2 LINE L2 1991 2083 -1231 2841 303 54 42 chr10 9330852 9332274 -136257014 + L2 LINE L2 1797 3235 -78 396 319 129 12 chr10 9332837 9333000 -136256288 + MIR3 SINE MIR 16 197 -11 2231 108 3 6 chr10 9333490 9333841 -136255447 - L1P LINE L1 -794 5352 5003 1217 47 0 0 chr10 9333856 9334039 -136255249 + L1PA4 LINE L1 5996 6178 0 362 346 55 11 chr10 9334267 9334449 -136254839 + MIR3 SINE MIR 10 199 -9 459 278 8 32 chr10 9335853 9335979 -136253309 - MIR SINE MIR 0 262 140 1029 201 65 76 chr10 9336525 9336894 -136252394 + MLT1A1 LTR MaLR 1 365 0 266 310 26 26 chr10 9337023 9337139 -136252149 - MIR SINE MIR -116 146 31 3318 111 16 2 chr10 9337361 9337858 -136251430 + L1PA15 LINE L1 5662 6165 0 2431 86 0 0 chr10 9338551 9338854 -136250434 - AluSg SINE Alu -7 303 1 603 296 49 16 chr10 9338963 9339270 -136250018 - L1ME4a LINE L1 -207 5914 5598 809 285 139 30 chr10 9339969 9340442 -136248846 - MLT1L LTR MaLR -1 614 90 1721 96 4 0 chr10 9340466 9340696 -136248592 + AluSg/x SINE Alu 74 304 -6 243 0 0 0 chr10 9341163 9341190 -136248098 + (A)n Simple_repeat Simple_repeat 1 27 0 455 313 98 27 chr10 9342077 9342301 -136246987 + MIR SINE MIR 2 241 -21 1936 135 0 0 chr10 9342740 9343044 -136246244 - AluSx SINE Alu 0 304 1 703 140 29 0 chr10 9343123 9343259 -136246029 + (CTTTA)n Simple_repeat Simple_repeat 2 141 0 2207 90 3 3 chr10 9343259 9343559 -136245729 - AluSg SINE Alu -10 300 1 537 282 153 5 chr10 9343647 9343863 -136245425 + MIR SINE MIR 14 261 -1 1809 117 48 31 chr10 9344428 9344549 -136244739 + AluSx SINE Alu 1 118 -194 198 0 0 0 chr10 9344549 9344571 -136244717 + (TAA)n Simple_repeat Simple_repeat 2 23 0 1809 117 48 31 chr10 9344571 9344739 -136244549 + AluSx SINE Alu 118 295 -17 232 182 0 0 chr10 9345680 9345724 -136243564 - MIR SINE MIR -109 153 110 27 62 0 0 chr10 9348749 9348797 -136240491 + AT_rich Low_complexity Low_complexity 1 48 0 25 31 0 0 chr10 9349174 9349206 -136240082 + AT_rich Low_complexity Low_complexity 1 32 0 25 90 0 0 chr10 9349483 9349550 -136239738 + AT_rich Low_complexity Low_complexity 1 67 0 357 24 0 0 chr10 9349767 9349809 -136239479 + (TG)n Simple_repeat Simple_repeat 2 43 0 414 0 0 0 chr10 9350714 9350760 -136238528 + (CA)n Simple_repeat Simple_repeat 1 46 0 1256 187 103 54 chr10 9352162 9352272 -136237016 - MER7A DNA MER2_type -2693 345 242 2268 62 0 0 chr10 9352272 9352548 -136236740 + AluY SINE Alu 1 276 -35 275 64 0 21 chr10 9352549 9352596 -136236692 + (CAAAA)n Simple_repeat Simple_repeat 1 46 0 1256 187 103 54 chr10 9352596 9352814 -136236474 - MER7A DNA MER2_type -2795 243 1 22 35 0 0 chr10 9353777 9353806 -136235482 + AT_rich Low_complexity Low_complexity 1 29 0 548 233 0 6 chr10 9353990 9354153 -136235135 + (TA)n Simple_repeat Simple_repeat 1 162 0 365 104 83 23 chr10 9356380 9356640 -136232648 + (TA)n Simple_repeat Simple_repeat 1 275 0 1419 117 206 8 chr10 9356688 9356936 -136232352 + AluSg1 SINE Alu 1 297 -12 26 74 0 0 chr10 9357269 9357323 -136231965 + AT_rich Low_complexity Low_complexity 1 54 0 216 0 0 0 chr10 9357753 9357777 -136231511 + (TCTA)n Simple_repeat Simple_repeat 4 27 0 2098 97 0 63 chr10 9357788 9358119 -136231169 - AluSx SINE Alu -2 310 1 1296 159 0 9 chr10 9358241 9358461 -136230827 - AluJb SINE Alu 0 312 95 210 260 14 0 chr10 9358555 9358628 -136230660 + (TA)n Simple_repeat Simple_repeat 1 74 0 21 36 0 0 chr10 9359197 9359225 -136230063 + AT_rich Low_complexity Low_complexity 1 28 0 2138 41 0 4 chr10 9359794 9360063 -136229225 + L1PA3 LINE L1 5888 6155 0 2135 119 7 3 chr10 9360314 9360617 -136228671 - AluSq SINE Alu -9 304 1 215 59 0 29 chr10 9360668 9360702 -136228586 + (TG)n Simple_repeat Simple_repeat 2 34 0 2081 102 3 23 chr10 9360753 9361056 -136228232 + AluSc SINE Alu 2 298 -11 24 0 0 0 chr10 9361096 9361120 -136228168 + AT_rich Low_complexity Low_complexity 1 24 0 288 200 0 0 chr10 9361232 9361302 -136227986 + (TATATG)n Simple_repeat Simple_repeat 5 74 0 215 123 0 53 chr10 9361445 9361502 -136227786 + (TA)n Simple_repeat Simple_repeat 2 55 0 741 156 0 0 chr10 9361900 9362028 -136227260 + AluSg/x SINE Alu 184 311 -1 311 210 25 103 chr10 9362779 9362929 -136226359 + HAL1b LINE L1 387 483 -865 2111 92 0 0 chr10 9363322 9363594 -136225694 - AluSg SINE Alu -4 306 35 22 56 0 0 chr10 9363960 9363996 -136225292 + AT_rich Low_complexity Low_complexity 1 36 0 248 315 61 44 chr10 9364041 9364222 -136225066 + MIR SINE MIR 53 236 -26 1921 82 90 4 chr10 9364612 9364879 -136224409 - AluSc SINE Alu -17 292 3 236 357 8 23 chr10 9364932 9365061 -136224227 + MIR3 SINE MIR 40 166 -42 2152 147 65 20 chr10 9365085 9365486 -136223802 + MSTB LTR MaLR 8 426 0 269 306 68 34 chr10 9365922 9366069 -136223219 + MIR3 SINE MIR 32 183 -25 27 0 0 0 chr10 9367237 9367264 -136222024 + AT_rich Low_complexity Low_complexity 1 27 0 460 329 55 21 chr10 9367944 9368181 -136221107 - MIR SINE MIR -16 246 2 361 315 94 71 chr10 9368718 9368972 -136220316 + HAL1 LINE L1 56 315 -2192 646 248 59 101 chr10 9369362 9370003 -136219285 + HAL1 LINE L1 861 1474 -1033 634 220 8 0 chr10 9370004 9370122 -136219166 + FLAM_C SINE Alu 2 120 -13 527 234 48 8 chr10 9370122 9370246 -136219042 + MER58B DNA MER1_type 181 309 -32 241 329 0 14 chr10 9372514 9372584 -136216704 - L2 LINE L2 -18 3254 3186 220 256 64 0 chr10 9372858 9372936 -136216352 + MIR SINE MIR 124 206 -56 2143 68 37 17 chr10 9373084 9373380 -136215908 - AluY SINE Alu -9 302 1 735 263 36 0 chr10 9373439 9373633 -136215655 - MIR SINE MIR -40 222 22 297 0 0 0 chr10 9374669 9374702 -136214586 + (CA)n Simple_repeat Simple_repeat 2 34 0 2152 88 0 18 chr10 9374703 9375017 -136214271 - AluY SINE Alu 0 309 1 260 227 0 82 chr10 9375021 9375118 -136214170 - L1M4 LINE L1 -981 5165 5077 1171 186 53 19 chr10 9375449 9375713 -136213575 + L1 LINE L1 4128 4400 -1746 318 164 0 0 chr10 9375825 9375880 -136213408 - MLT1H LTR MaLR -4 545 491 1311 193 3 67 chr10 9376727 9377027 -136212261 - AluJo SINE Alu -27 285 5 228 35 0 0 chr10 9377051 9377080 -136212208 + (TG)n Simple_repeat Simple_repeat 2 30 0 210 243 40 14 chr10 9377478 9377552 -136211736 - MIR SINE MIR -11 251 176 1736 72 38 0 chr10 9377719 9377955 -136211333 - L1PA7 LINE L1 -11 6143 5899 252 185 0 0 chr10 9378476 9378530 -136210758 + T-rich Low_complexity Low_complexity 1 54 0 498 361 61 4 chr10 9378843 9379073 -136210215 + MIR SINE MIR 2 244 -18 2269 144 67 8 chr10 9379178 9379580 -136209708 - MSTA LTR MaLR 0 428 3 231 329 49 63 chr10 9379758 9379901 -136209387 + L2 LINE L2 3132 3272 0 1520 181 21 91 chr10 9380204 9380445 -136208843 - MLT1B LTR MaLR 0 390 189 438 20 0 0 chr10 9380445 9380496 -136208792 + (TG)n Simple_repeat Simple_repeat 2 52 0 1520 181 21 91 chr10 9380496 9380673 -136208615 - MLT1B LTR MaLR -201 189 1 182 283 28 75 chr10 9381268 9381362 -136207926 - L2 LINE L2 -537 2777 2687 1826 163 0 10 chr10 9381362 9381657 -136207631 + AluJb SINE Alu 1 292 -20 182 283 28 75 chr10 9381657 9381668 -136207620 - L2 LINE L2 -627 2687 2677 293 309 100 0 chr10 9382398 9382508 -136206780 - MER103 DNA DNA -2 164 44 7185 33 2 0 chr10 9382538 9383396 -136205892 + L1PA5 LINE L1 5287 6146 -8 3264 128 27 19 chr10 9384609 9385132 -136204156 - MER1A DNA MER1_type 0 527 1 1830 117 0 78 chr10 9385612 9385941 -136203347 + AluSx SINE Alu 1 305 0 858 199 17 6 chr10 9386275 9386451 -136202837 - AluJb SINE Alu -5 307 130 644 324 65 16 chr10 9386492 9386739 -136202549 + MIR SINE MIR 4 262 0 506 275 31 25 chr10 9388450 9388610 -136200678 - MIR SINE MIR -10 252 92 25 51 0 0 chr10 9389798 9389837 -136199451 + AT_rich Low_complexity Low_complexity 1 39 0 26 30 0 0 chr10 9389909 9389942 -136199346 + AT_rich Low_complexity Low_complexity 1 33 0 4175 190 44 54 chr10 9389946 9390965 -136198323 - L1MB2 LINE L1 -3 6168 5188 2262 95 23 0 chr10 9390965 9391270 -136198018 - AluSx SINE Alu 0 312 1 4175 190 44 54 chr10 9391270 9391541 -136197747 - L1MB2 LINE L1 -983 5188 4916 654 298 36 0 chr10 9391630 9391882 -136197406 - MIR SINE MIR 0 262 2 250 203 14 14 chr10 9391920 9391994 -136197294 + CT-rich Low_complexity Low_complexity 2 75 0 303 181 0 0 chr10 9393828 9393900 -136195388 + GA-rich Low_complexity Low_complexity 1 72 0 24 0 0 0 chr10 9394384 9394408 -136194880 + AT_rich Low_complexity Low_complexity 1 24 0 983 174 25 5 chr10 9396014 9396215 -136193073 - L1MA5A LINE L1 -3 6294 6090 1507 177 50 4 chr10 9396821 9397148 -136192140 - AluJb SINE Alu 0 312 15 323 291 73 33 chr10 9397691 9397842 -136191446 + MER5A DNA MER1_type 1 157 -32 386 333 15 0 chr10 9398088 9398220 -136191068 + L2 LINE L2 3180 3313 0 182 185 0 74 chr10 9398483 9398537 -136190751 - L3 LINE CR1 -1221 356 307 25 0 0 0 chr10 9398681 9398706 -136190582 + AT_rich Low_complexity Low_complexity 1 25 0 1671 159 7 42 chr10 9398706 9399014 -136190274 - AluJo SINE Alu -15 297 1 1448 113 216 9 chr10 9400276 9400531 -136188757 - AluSg1 SINE Alu 0 305 3 454 280 37 53 chr10 9402406 9402595 -136186693 + MIR SINE MIR 21 206 -56 706 226 60 3 chr10 9402616 9402809 -136186479 + L1MA8 LINE L1 6086 6275 -16 1958 193 48 7 chr10 9402926 9403341 -136185947 + MSTB1 LTR MaLR 1 432 0 8889 192 14 10 chr10 9403341 9404972 -136184316 + MSTB-int LTR MaLR 1 1637 -14 2056 204 36 2 chr10 9404983 9405395 -136183893 + MSTB LTR MaLR 1 426 0 269 360 9 9 chr10 9405558 9405672 -136183616 - MIR SINE MIR -71 191 78 892 221 43 14 chr10 9405981 9406189 -136183099 + MST-int LTR MaLR 562 775 -876 180 0 0 0 chr10 9406800 9406820 -136182468 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 204 196 18 18 chr10 9408010 9408066 -136181222 + (TAAA)n Simple_repeat Simple_repeat 2 57 0 2712 187 8 2 chr10 9408178 9408703 -136180585 - L1 LINE L1 -1004 5142 4615 221 96 115 0 chr10 9408986 9409038 -136180250 + (ATATG)n Simple_repeat Simple_repeat 3 60 0 367 388 76 20 chr10 9409160 9409464 -136179824 - L1MEd LINE L1 -5556 563 243 459 257 79 50 chr10 9410032 9410172 -136179116 + MLT1G1 LTR MaLR 448 591 -4 186 312 143 0 chr10 9410375 9410452 -136178836 + L3 LINE CR1 1058 1145 -432 21 0 0 0 chr10 9410953 9410974 -136178314 + AT_rich Low_complexity Low_complexity 1 21 0 348 325 41 0 chr10 9411175 9411298 -136177990 - L2 LINE L2 -9 3304 3177 2316 81 10 3 chr10 9412431 9412728 -136176560 - AluSg SINE Alu -11 299 1 1023 209 4 31 chr10 9412818 9413043 -136176245 + MER20 DNA MER1_type 1 219 0 379 295 108 66 chr10 9413477 9413735 -136175553 - L3 LINE CR1 -2 1575 1307 21 0 0 0 chr10 9414559 9414580 -136174708 + AT_rich Low_complexity Low_complexity 1 21 0 298 260 149 19 chr10 9415146 9415300 -136173988 - MLT1J1 LTR MaLR -272 174 1 2551 97 39 8 chr10 9415757 9416147 -136173141 - L1PA12 LINE L1 -2 6166 5765 556 341 159 24 chr10 9416147 9416726 -136172562 + L2 LINE L2 2661 3313 0 528 101 13 0 chr10 9416878 9416957 -136172331 - MADE1 DNA Mariner 0 80 1 2155 104 7 20 chr10 9418301 9418599 -136170689 + AluSx SINE Alu 1 294 -18 646 345 47 45 chr10 9419998 9420506 -136168782 - HERV16 LTR ERVL -2921 2075 1567 2387 80 10 0 chr10 9420756 9421055 -136168233 - AluSc SINE Alu -7 302 1 211 329 14 0 chr10 9423090 9423160 -136166128 + (TG)n Simple_repeat Simple_repeat 1 71 0 1928 167 0 0 chr10 9425235 9425535 -136163753 - AluSx SINE Alu -12 300 1 1849 132 50 63 chr10 9425742 9426122 -136163166 - THE1C LTR MaLR 0 375 1 4148 110 86 95 chr10 9426767 9428160 -136161128 + pTR5 LTR ERV1 66 2438 0 2056 104 30 7 chr10 9428429 9428726 -136160562 + AluSx SINE Alu 1 304 -8 345 292 17 25 chr10 9428728 9428848 -136160440 - MER5B DNA MER1_type -59 119 1 193 243 84 65 chr10 9430235 9430342 -136158946 + L2 LINE L2 3200 3308 -5 26 0 0 0 chr10 9431081 9431107 -136158181 + AT_rich Low_complexity Low_complexity 1 26 0 560 247 78 119 chr10 9432380 9432731 -136156557 + L1ME LINE L1 11 328 -5742 1832 174 96 34 chr10 9432731 9433138 -136156150 + MSTB1 LTR MaLR 1 432 0 560 247 78 119 chr10 9433138 9433390 -136155898 + L1ME LINE L1 328 589 -5481 763 186 0 0 chr10 9433556 9433680 -136155608 - FLAM_C SINE Alu -19 124 1 2891 280 91 30 chr10 9433680 9436296 -136152992 + L1ME LINE L1 777 3568 -2512 1667 169 72 6 chr10 9436342 9436690 -136152598 + L1MA8 LINE L1 5808 6178 -113 854 205 0 0 chr10 9436857 9437008 -136152280 - FRAM SINE Alu -15 151 1 24 0 0 0 chr10 9437008 9437032 -136152256 + AT_rich Low_complexity Low_complexity 1 24 0 1355 165 0 38 chr10 9437044 9437281 -136152007 - AluJo SINE Alu -84 228 1 2639 33 0 0 chr10 9437856 9438162 -136151126 - AluY SINE Alu -5 306 1 25 0 0 0 chr10 9439802 9439827 -136149461 + AT_rich Low_complexity Low_complexity 1 25 0 1331 216 78 58 chr10 9440779 9441140 -136148148 - MLT1A2 LTR MaLR -1 373 6 459 236 121 50 chr10 9441290 9441472 -136147816 - MIR SINE MIR -27 235 41 451 207 12 18 chr10 9443156 9443325 -136145963 + (TA)n Simple_repeat Simple_repeat 2 169 0 213 180 0 0 chr10 9443364 9443414 -136145874 + (CATA)n Simple_repeat Simple_repeat 2 51 0 2139 99 20 3 chr10 9445060 9445354 -136143934 + AluSg SINE Alu 1 299 -11 319 303 47 57 chr10 9446225 9446436 -136142852 + HAL1b LINE L1 439 647 -701 27 0 0 0 chr10 9446564 9446591 -136142697 + AT_rich Low_complexity Low_complexity 1 27 0 339 300 96 33 chr10 9447193 9447433 -136141855 - MIR SINE MIR 0 262 8 392 308 0 0 chr10 9447462 9447566 -136141722 + L2 LINE L2 3210 3313 0 2005 115 14 0 chr10 9448444 9448774 -136140514 + AluSx SINE Alu 1 334 0 487 104 0 0 chr10 9448873 9448950 -136140338 - Alu SINE Alu -5 305 229 369 0 0 0 chr10 9450093 9450106 -136139182 + (CA)n Simple_repeat Simple_repeat 1 54 0 369 0 0 0 chr10 9450106 9450147 -136139141 + (CA)n Simple_repeat Simple_repeat 2 42 0 920 105 8 0 chr10 9451153 9451277 -136138011 - AluSx SINE Alu -24 286 162 742 133 0 9 chr10 9451277 9451390 -136137898 - AluSx SINE Alu -200 112 1 25 51 0 0 chr10 9452072 9452111 -136137177 + AT_rich Low_complexity Low_complexity 1 39 0 24 0 0 0 chr10 9453685 9453709 -136135579 + AT_rich Low_complexity Low_complexity 1 24 0 27 49 0 0 chr10 9454433 9454474 -136134814 + AT_rich Low_complexity Low_complexity 1 41 0 22 70 0 0 chr10 9454719 9454762 -136134526 + AT_rich Low_complexity Low_complexity 1 43 0 1616 125 29 11 chr10 9455194 9455466 -136133822 + Tigger7 DNA MER2_type 2311 2587 0 27 87 0 0 chr10 9456290 9456359 -136132929 + AT_rich Low_complexity Low_complexity 1 69 0 625 286 95 62 chr10 9457135 9457874 -136131414 - LTR41 LTR ERVL -10 763 1 1230 164 9 14 chr10 9458025 9458244 -136131044 - MER46A DNA MER2_type 0 236 19 773 255 106 64 chr10 9458332 9458708 -136130580 + MLT1J LTR MaLR 79 470 -41 417 177 26 9 chr10 9458818 9458931 -136130357 + CT-rich Low_complexity Low_complexity 3 117 0 1858 156 7 14 chr10 9458933 9459228 -136130060 - AluSq SINE Alu -20 293 1 1097 295 87 2 chr10 9459616 9460009 -136129279 + LTR16A LTR ERVL 22 447 -3 2805 13 0 3 chr10 9460500 9460812 -136128476 + AluYa5 SINE Alu 1 311 0 25 51 0 0 chr10 9461185 9461224 -136128064 + AT_rich Low_complexity Low_complexity 1 39 0 284 332 103 18 chr10 9461673 9461896 -136127392 + MIR SINE MIR 15 256 -6 22 0 0 0 chr10 9462791 9462813 -136126475 + AT_rich Low_complexity Low_complexity 1 22 0 1964 106 32 3 chr10 9464865 9465149 -136124139 + AluSq SINE Alu 1 292 -21 189 0 0 0 chr10 9465446 9465467 -136123821 + (TAA)n Simple_repeat Simple_repeat 3 23 0 272 254 0 15 chr10 9465469 9465536 -136123752 + MLT1E1-int LTR MaLR 1135 1200 -171 1889 223 110 43 chr10 9465649 9466259 -136123029 + MLT1E1 LTR MaLR 1 651 -3 21 0 0 0 chr10 9466730 9466751 -136122537 + AT_rich Low_complexity Low_complexity 1 21 0 21 71 0 0 chr10 9467401 9467443 -136121845 + AT_rich Low_complexity Low_complexity 1 42 0 254 319 30 30 chr10 9467640 9467775 -136121513 - L2 LINE L2 -2 3270 3136 342 0 0 0 chr10 9468275 9468313 -136120975 + (TG)n Simple_repeat Simple_repeat 2 39 0 247 300 0 67 chr10 9469053 9469173 -136120115 - MIR SINE MIR -50 212 101 248 318 190 11 chr10 9469500 9469679 -136119609 + MIR SINE MIR 10 220 -42 223 225 0 0 chr10 9471051 9471091 -136118197 + MIR SINE MIR 48 87 -175 226 316 82 0 chr10 9472205 9472303 -136116985 + MIR SINE MIR 19 124 -84 267 93 0 0 chr10 9478552 9478595 -136110693 + (A)n Simple_repeat Simple_repeat 1 43 0 24 0 0 0 chr10 9479451 9479475 -136109813 + AT_rich Low_complexity Low_complexity 1 24 0 441 272 88 8 chr10 9479813 9479938 -136109350 + MIR3 SINE MIR 42 176 -32 21 71 0 0 chr10 9480060 9480102 -136109186 + AT_rich Low_complexity Low_complexity 1 42 0 226 163 23 0 chr10 9480527 9480570 -136108718 + LTR8A LTR ERV1 207 250 -477 186 43 0 0 chr10 9481474 9481497 -136107791 + (A)n Simple_repeat Simple_repeat 1 23 0 207 0 0 0 chr10 9481500 9481523 -136107765 + (CAGGC)n Simple_repeat Simple_repeat 5 27 0 25 31 0 0 chr10 9483566 9483598 -136105690 + AT_rich Low_complexity Low_complexity 1 32 0 193 323 38 113 chr10 9484175 9484361 -136104927 - MIR SINE MIR -66 196 25 514 288 29 0 chr10 9485108 9485247 -136104041 - MIR SINE MIR -1 261 119 276 91 0 0 chr10 9485259 9485303 -136103985 + (TA)n Simple_repeat Simple_repeat 2 45 0 297 315 67 17 chr10 9485666 9485844 -136103444 - HAL1 LINE L1 -1112 1395 1209 333 0 0 0 chr10 9486034 9486071 -136103217 + (TG)n Simple_repeat Simple_repeat 2 38 0 264 39 19 39 chr10 9486328 9486380 -136102908 + (TTTTG)n Simple_repeat Simple_repeat 2 52 0 2328 71 4 0 chr10 9486382 9486663 -136102625 - AluY SINE Alu -29 282 1 2493 255 40 69 chr10 9488190 9489251 -136100037 + L1MEc LINE L1 29 1059 -5337 989 205 10 29 chr10 9489263 9489468 -136099820 + MLT1D LTR MaLR 1 201 -304 185 65 32 0 chr10 9489469 9489500 -136099788 + (TTTC)n Simple_repeat Simple_repeat 3 34 0 287 111 42 14 chr10 9489532 9489604 -136099684 + CT-rich Low_complexity Low_complexity 3 76 0 886 236 34 61 chr10 9489604 9489668 -136099620 + MLT1D LTR MaLR 214 278 -227 2120 129 7 0 chr10 9489668 9489971 -136099317 + AluSq SINE Alu 1 305 -8 886 236 34 61 chr10 9489971 9490203 -136099085 + MLT1D LTR MaLR 278 502 -3 689 280 70 14 chr10 9490204 9490490 -136098798 + L1MEc LINE L1 1072 1373 -5023 963 272 191 8 chr10 9490585 9491187 -136098101 + L1MEc LINE L1 1552 2263 -4133 32 57 0 0 chr10 9491195 9491248 -136098040 + AT_rich Low_complexity Low_complexity 1 53 0 21 36 0 0 chr10 9491515 9491543 -136097745 + AT_rich Low_complexity Low_complexity 1 28 0 255 327 26 9 chr10 9491544 9491657 -136097631 + L2 LINE L2 2274 2388 -926 6512 200 19 16 chr10 9491966 9493983 -136095305 + L1MA2 LINE L1 3176 5203 -2362 2474 192 12 2 chr10 9493981 9494475 -136094813 + L1MA2 LINE L1 6041 6539 -1026 * 2178 111 3 6 chr10 9494458 9494774 -136094514 + L1MA2 LINE L1 6894 7208 -515 * 347 179 17 103 chr10 9495064 9495181 -136094107 + MER112 DNA MER1_type 2 108 -152 2489 132 2 32 chr10 9495198 9495504 -136093784 + L1MA2 LINE L1 7190 7481 -242 2485 71 0 0 chr10 9495504 9495814 -136093474 + AluSg SINE Alu 1 310 0 2489 132 2 32 chr10 9495814 9495946 -136093342 + L1MA2 LINE L1 7481 7615 -108 26 0 0 0 chr10 9496077 9496103 -136093185 + AT_rich Low_complexity Low_complexity 1 26 0 2309 97 3 0 chr10 9498489 9498797 -136090491 - AluY SINE Alu -2 309 1 186 133 0 0 chr10 9499026 9499056 -136090232 + (T)n Simple_repeat Simple_repeat 1 30 0 1156 117 0 0 chr10 9499772 9499935 -136089353 + AluSq SINE Alu 137 299 -14 181 341 55 82 chr10 9499950 9500243 -136089045 - L2 LINE L2 -2 3270 2986 21 36 0 0 chr10 9501705 9501733 -136087555 + AT_rich Low_complexity Low_complexity 1 28 0 1703 96 17 0 chr10 9502622 9502861 -136086427 - L1PA10 LINE L1 -14 6154 5912 311 325 0 0 chr10 9503299 9503382 -136085906 + L2 LINE L2 2225 2307 -1007 445 325 64 11 chr10 9503461 9503649 -136085639 + MIR SINE MIR 65 262 0 226 363 11 28 chr10 9503661 9503840 -136085448 + L2 LINE L2 2323 2498 -816 185 360 88 20 chr10 9503940 9504087 -136085201 + L2 LINE L2 2631 2787 -527 23 68 0 0 chr10 9504597 9504641 -136084647 + AT_rich Low_complexity Low_complexity 1 44 0 255 336 153 15 chr10 9507422 9507559 -136081729 + L2 LINE L2 3116 3271 -1 211 179 36 0 chr10 9508562 9508618 -136080670 + (TA)n Simple_repeat Simple_repeat 2 59 0 21 0 0 0 chr10 9509720 9509741 -136079547 + AT_rich Low_complexity Low_complexity 1 21 0 531 0 0 0 chr10 9511220 9511279 -136078009 + (CA)n Simple_repeat Simple_repeat 2 60 0 1899 86 3 86 chr10 9511286 9511590 -136077698 - AluSg SINE Alu -31 279 1 1317 177 50 0 chr10 9512051 9512361 -136076927 - L1P LINE L1 -759 5406 5086 3300 107 2 4 chr10 9512361 9512855 -136076433 + L1PA13 LINE L1 5669 6163 0 235 149 0 30 chr10 9513420 9513487 -136075801 + (CA)n Simple_repeat Simple_repeat 2 66 0 23 33 0 0 chr10 9514198 9514228 -136075060 + AT_rich Low_complexity Low_complexity 1 30 0 2801 179 21 40 chr10 9514932 9515973 -136073315 - L1MA10 LINE L1 -373 5795 4781 266 208 0 0 chr10 9515970 9516023 -136073265 + L1MA10 LINE L1 5786 5838 -474 * 191 61 30 0 chr10 9516028 9516061 -136073227 + (TTTTTG)n Simple_repeat Simple_repeat 3 36 0 6451 102 32 110 chr10 9516065 9517489 -136071799 - SVA Other Other -17 1369 57 917 106 0 22 chr10 9517489 9517669 -136071619 + (GGGAGA)n Simple_repeat Simple_repeat 5 180 0 1969 212 56 30 chr10 9517774 9518125 -136071163 + L1MA10 LINE L1 5820 6190 -144 1989 117 22 0 chr10 9518125 9518420 -136070868 + AluSq SINE Alu 5 305 0 1969 212 56 30 chr10 9518420 9518568 -136070720 + L1MA10 LINE L1 6190 6333 -1 189 0 0 0 chr10 9518873 9518894 -136070394 + (CCA)n Simple_repeat Simple_repeat 2 22 0 700 271 140 13 chr10 9519476 9519705 -136069583 + MIR SINE MIR 5 262 0 180 0 0 0 chr10 9519993 9520013 -136069275 + (TG)n Simple_repeat Simple_repeat 2 21 0 333 0 0 0 chr10 9520248 9520285 -136069003 + (TG)n Simple_repeat Simple_repeat 2 38 0 1998 136 0 3 chr10 9520286 9520572 -136068716 - AluSx SINE Alu -27 285 1 329 321 78 10 chr10 9520902 9521095 -136068193 + L1MC4a LINE L1 5791 5996 -1812 228 68 0 68 chr10 9522195 9522254 -136067034 + (TTTTTG)n Simple_repeat Simple_repeat 2 56 0 2135 100 4 0 chr10 9522879 9523183 -136066105 + AluSx SINE Alu 13 317 0 387 0 0 0 chr10 9523500 9523543 -136065745 + (TTA)n Simple_repeat Simple_repeat 2 44 0 2776 104 15 5 chr10 9523545 9523947 -136065341 - L1PA11 LINE L1 -15 6159 5754 26 0 0 0 chr10 9524973 9524999 -136064289 + AT_rich Low_complexity Low_complexity 1 26 0 439 261 56 0 chr10 9526269 9526411 -136062877 - MER104 DNA Tc2 -30 150 1 2401 80 0 19 chr10 9526454 9526765 -136062523 - AluSg1 SINE Alu -4 305 1 616 184 0 0 chr10 9527399 9527502 -136061786 - FLAM_A SINE Alu -18 124 22 30 0 0 0 chr10 9529596 9529626 -136059662 + AT_rich Low_complexity Low_complexity 1 30 0 186 43 0 0 chr10 9529659 9529682 -136059606 + (CAAAA)n Simple_repeat Simple_repeat 5 27 0 23 0 0 0 chr10 9530567 9530590 -136058698 + AT_rich Low_complexity Low_complexity 1 23 0 316 295 14 65 chr10 9530912 9531051 -136058237 - L2 LINE L2 0 3313 3182 394 301 51 59 chr10 9531646 9531882 -136057406 + L2 LINE L2 3072 3305 -8 407 216 21 21 chr10 9532009 9532106 -136057182 - MLT1J2 LTR MaLR -284 166 70 768 136 0 64 chr10 9532115 9532255 -136057033 + FLAM_C SINE Alu 3 133 0 24 0 0 0 chr10 9532712 9532736 -136056552 + AT_rich Low_complexity Low_complexity 1 24 0 263 279 37 62 chr10 9533098 9533245 -136056043 + L2 LINE L2 3156 3300 -13 216 67 0 0 chr10 9533245 9533275 -136056013 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 263 279 37 62 chr10 9533275 9533288 -136056000 + L2 LINE L2 3300 3312 -1 186 103 0 0 chr10 9533376 9533405 -136055883 + (TC)n Simple_repeat Simple_repeat 2 30 0 248 277 74 74 chr10 9533777 9533979 -136055309 - MER112 DNA MER1_type -9 251 50 601 277 66 21 chr10 9535546 9535788 -136053500 + MIR SINE MIR 10 262 0 41 48 0 0 chr10 9535954 9536016 -136053272 + AT_rich Low_complexity Low_complexity 1 62 0 332 211 28 110 chr10 9536026 9536060 -136053228 + MARNA DNA Mariner 119 154 -432 264 59 0 0 chr10 9536060 9536094 -136053194 + (TA)n Simple_repeat Simple_repeat 2 35 0 2056 112 14 11 chr10 9536094 9536381 -136052907 - AluSq SINE Alu -25 288 1 332 211 28 110 chr10 9536381 9536454 -136052834 + MARNA DNA Mariner 152 218 -368 3326 136 20 36 chr10 9536462 9536746 -136052542 + L1MA8 LINE L1 5668 5955 -336 2224 100 0 3 chr10 9536746 9537037 -136052251 + AluSg SINE Alu 6 295 -15 3326 136 20 36 chr10 9537037 9537386 -136051902 + L1MA8 LINE L1 5955 6291 0 879 254 5 10 chr10 9537579 9537788 -136051500 - MER58A DNA MER1_type -16 208 1 495 294 44 6 chr10 9538298 9538458 -136050830 - MIR3 SINE MIR -11 197 32 21 0 0 0 chr10 9539556 9539577 -136049711 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr10 9540728 9540765 -136048523 + AT_rich Low_complexity Low_complexity 1 37 0 23 0 0 0 chr10 9542187 9542210 -136047078 + AT_rich Low_complexity Low_complexity 1 23 0 2189 108 7 0 chr10 9543028 9543335 -136045953 + AluSq SINE Alu 1 309 -4 264 326 26 34 chr10 9544022 9544180 -136045108 - MIR SINE MIR -81 127 17 742 186 36 7 chr10 9544415 9544555 -136044733 - FRAM SINE Alu -26 150 7 22 56 0 0 chr10 9544675 9544711 -136044577 + AT_rich Low_complexity Low_complexity 1 36 0 286 211 32 84 chr10 9546107 9546202 -136043086 - MIR3 SINE MIR -21 187 98 211 322 20 74 chr10 9546872 9547021 -136042267 + L2 LINE L2 1803 1943 -1371 369 324 17 56 chr10 9547153 9547332 -136041956 + LTR16A LTR ERVL 198 369 -81 1001 223 96 98 chr10 9547437 9547864 -136041424 + MSTA LTR MaLR 1 426 -2 430 53 80 53 chr10 9548269 9548344 -136040944 + MADE1 DNA Mariner 4 80 0 197 108 27 0 chr10 9548688 9548725 -136040563 + (CTTTG)n Simple_repeat Simple_repeat 2 39 0 5466 102 16 5 chr10 9549512 9550317 -136038971 + L1PA13 LINE L1 5348 6161 -2 190 323 183 11 chr10 9550844 9550937 -136038351 + MIR3 SINE MIR 46 154 -54 261 229 104 31 chr10 9553071 9553167 -136036121 - L2 LINE L2 -10 3303 3201 420 287 72 24 chr10 9553268 9553435 -136035853 + MER5B DNA MER1_type 1 175 -3 261 179 0 119 chr10 9553445 9553512 -136035776 + L2 LINE L2 3213 3271 -1 2218 124 0 0 chr10 9554291 9554589 -136034699 + AluSx SINE Alu 1 298 -14 522 311 34 10 chr10 9555348 9555557 -136033731 + L1MC4 LINE L1 6459 6672 -1370 566 306 52 9 chr10 9557743 9557972 -136031316 - HERV16 LTR ERVL -2550 3104 2866 334 345 6 24 chr10 9558303 9558471 -136030817 - HERV16 LTR ERVL -3194 2460 2296 2299 113 54 6 chr10 9558482 9558835 -136030453 - THE1C LTR MaLR -3 372 3 355 386 33 39 chr10 9559274 9559694 -136029594 - HERV16 LTR ERVL -3425 1571 1323 252 308 130 35 chr10 9560576 9560745 -136028543 + L2 LINE L2 3109 3293 -20 24 0 0 0 chr10 9561097 9561121 -136028167 + AT_rich Low_complexity Low_complexity 1 24 0 1369 239 15 39 chr10 9561475 9561602 -136027686 + L1MB7 LINE L1 5789 5917 -267 2173 100 17 7 chr10 9561602 9561902 -136027386 - AluSx SINE Alu -9 303 1 1369 239 15 39 chr10 9561902 9562163 -136027125 + L1MB7 LINE L1 5917 6168 -16 312 322 20 0 chr10 9562244 9562443 -136026845 + L1M4 LINE L1 2349 2551 -3595 258 182 26 13 chr10 9562548 9562625 -136026663 + (CATATA)n Simple_repeat Simple_repeat 2 79 0 322 259 130 19 chr10 9562625 9562787 -136026501 + L1MCa LINE L1 2017 2196 -4230 517 248 30 0 chr10 9562819 9562952 -136026336 + L1MC3 LINE L1 6599 6735 -1050 316 211 32 16 chr10 9562956 9563079 -136026209 + L1MB7 LINE L1 6058 6182 -2 186 103 0 0 chr10 9564343 9564372 -136024916 + (TCCC)n Simple_repeat Simple_repeat 3 31 0 1038 104 6 22 chr10 9564384 9564567 -136024721 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 22 0 0 0 chr10 9565050 9565072 -136024216 + AT_rich Low_complexity Low_complexity 1 22 0 215 246 0 18 chr10 9567009 9567066 -136022222 + (CATA)n Simple_repeat Simple_repeat 3 58 0 248 245 161 59 chr10 9567067 9567353 -136021935 - L1MC4 LINE L1 -131 7911 7597 454 301 21 36 chr10 9567389 9567582 -136021706 - L1MC4a LINE L1 -393 7415 7226 2294 89 3 3 chr10 9568165 9568469 -136020819 + AluSp SINE Alu 1 304 -9 330 317 147 75 chr10 9569911 9570383 -136018905 - L1MEd LINE L1 -730 1760 1139 190 56 56 0 chr10 9570383 9570419 -136018869 + (TA)n Simple_repeat Simple_repeat 1 38 0 330 317 147 75 chr10 9570419 9570592 -136018696 - L1MEd LINE L1 -1351 1139 980 345 200 38 25 chr10 9571472 9571552 -136017736 + MLT1J LTR MaLR 100 180 -331 2134 120 0 3 chr10 9571595 9571903 -136017385 + AluSc SINE Alu 1 307 -2 1099 211 19 42 chr10 9572369 9572629 -136016659 + L1M4 LINE L1 4536 4789 -1357 2050 127 37 0 chr10 9572948 9573247 -136016041 + AluSq SINE Alu 2 311 -2 2114 171 88 0 chr10 9573724 9574110 -136015178 + MSTB LTR MaLR 3 422 -4 824 110 0 0 chr10 9574730 9574839 -136014449 + AluSq SINE Alu 105 213 -100 870 230 61 9 chr10 9575502 9575732 -136013556 - L1MB8 LINE L1 -6 6172 5931 1585 58 98 146 chr10 9575738 9576067 -136013221 - AluY SINE Alu 0 315 1 190 235 44 44 chr10 9576409 9576477 -136012811 - MIR SINE MIR 0 262 195 22 35 0 0 chr10 9576487 9576516 -136012772 + AT_rich Low_complexity Low_complexity 1 29 0 2009 105 15 52 chr10 9576972 9577296 -136011992 - AluSx SINE Alu 0 312 1 201 362 148 0 chr10 9577740 9577889 -136011399 - L2 LINE L2 -448 2866 2696 983 217 29 16 chr10 9577894 9578138 -136011150 + MLT1A1 LTR MaLR 2 248 -117 192 250 17 50 chr10 9578316 9578376 -136010912 + MIR SINE MIR 205 262 0 491 216 9 38 chr10 9578422 9578553 -136010735 + MLT1A1 LTR MaLR 250 365 0 433 370 56 40 chr10 9578574 9579055 -136010233 - L2 LINE L2 -639 2675 2187 449 324 48 67 chr10 9579063 9579378 -136009910 + L2 LINE L2 2961 3269 -3 2062 120 6 43 chr10 9579388 9579737 -136009551 + L1MA9 LINE L1 5447 5782 -509 3750 112 0 15 chr10 9579760 9580295 -136008993 - MER1A DNA MER1_type 0 527 1 2531 169 31 10 chr10 9580351 9580872 -136008416 + L1MA9 LINE L1 5781 6312 0 407 313 95 29 chr10 9582004 9582438 -136006850 - LTR33 LTR ERVL -2 519 24 507 189 29 11 chr10 9582577 9582668 -136006620 + (TAGA)n Simple_repeat Simple_repeat 3 91 -89 1944 201 6 6 chr10 9582668 9583032 -136006256 + MLT1A1 LTR MaLR 2 365 0 507 189 29 11 chr10 9583032 9583115 -136006173 + (TAGA)n Simple_repeat Simple_repeat 91 180 0 268 193 0 133 chr10 9583142 9583225 -136006063 - MLT2C1 LTR ERVL -50 347 276 546 185 67 8 chr10 9583549 9583668 -136005620 - MSTB1 LTR MaLR -2 430 305 283 103 69 0 chr10 9583647 9583705 -136005583 + AluYb8 SINE Alu 243 304 -4 * 324 314 102 28 chr10 9584165 9584448 -136004840 + L1M4 LINE L1 4247 4550 -1596 1264 107 58 0 chr10 9584471 9584677 -136004611 + L1MA1 LINE L1 6085 6302 0 238 139 38 25 chr10 9585823 9585902 -136003386 + GA-rich Low_complexity Low_complexity 2 81 0 2182 117 3 3 chr10 9587342 9587640 -136001648 - AluSq SINE Alu -15 298 1 683 301 58 62 chr10 9587780 9588279 -136001009 - LTR67 LTR ERVL -22 535 39 440 273 41 78 chr10 9588337 9588579 -136000709 - L2 LINE L2 -4 3309 3077 2022 124 41 0 chr10 9588800 9589090 -136000198 - AluSx SINE Alu -10 302 1 3943 223 89 96 chr10 9589095 9591215 -135998073 - L1MCa LINE L1 -2805 3621 1487 2259 113 33 33 chr10 9591215 9591579 -135997709 + THE1B LTR MaLR 1 364 0 3943 223 89 96 chr10 9591579 9592836 -135996452 - L1MCa LINE L1 -4939 1487 263 2143 129 134 3 chr10 9592836 9593209 -135996079 - MSTA LTR MaLR -2 426 5 3943 223 89 96 chr10 9593209 9593337 -135995951 - L1MCa LINE L1 -6163 263 136 2156 131 3 10 chr10 9593350 9593664 -135995624 - AluSx SINE Alu 0 312 1 2057 140 10 0 chr10 9593709 9594017 -135995271 + AluSq SINE Alu 1 311 -2 745 317 101 29 chr10 9594019 9594435 -135994853 - LTR67 LTR ERVL -79 478 33 1539 213 44 49 chr10 9595178 9595567 -135993721 + MLT1B LTR MaLR 1 387 -3 397 298 43 6 chr10 9596518 9596679 -135992609 - MER110A LTR ERV1 0 468 302 2383 80 0 3 chr10 9596699 9597011 -135992277 + AluY SINE Alu 1 311 0 308 149 0 15 chr10 9597024 9597091 -135992197 + (TA)n Simple_repeat Simple_repeat 2 67 0 395 247 92 35 chr10 9597092 9597266 -135992022 + L1MB7 LINE L1 1706 1889 -4495 2329 216 82 55 chr10 9597310 9597702 -135991586 + L1MB7 LINE L1 5085 5465 -955 1739 173 14 3 chr10 9597702 9597985 -135991303 + AluJb SINE Alu 1 286 -26 2329 216 82 55 chr10 9597985 9598752 -135990536 + L1MB7 LINE L1 5465 6420 0 718 287 78 29 chr10 9599471 9599715 -135989573 + MIR SINE MIR 2 257 -5 2042 106 51 7 chr10 9599804 9600096 -135989192 + AluSg SINE Alu 1 305 -5 1984 127 43 0 chr10 9600584 9600883 -135988405 - AluSx SINE Alu 0 312 1 475 119 10 69 chr10 9601576 9601677 -135987611 - L1MA6 LINE L1 -303 5997 5903 1613 156 13 42 chr10 9602183 9602490 -135986798 + Tigger2a DNA MER2_type 2 299 -135 534 109 10 69 chr10 9602521 9602622 -135986666 - L1MA6 LINE L1 -303 5997 5903 2358 104 0 0 chr10 9603016 9603324 -135985964 + AluSg SINE Alu 1 308 -2 183 333 0 0 chr10 9603346 9603388 -135985900 + MIR SINE MIR 23 64 -198 243 174 10 82 chr10 9603398 9603496 -135985792 - L1MC4 LINE L1 -1338 6704 6614 238 213 16 31 chr10 9603501 9603763 -135985525 + (TA)n Simple_repeat Simple_repeat 1 257 0 180 77 0 0 chr10 9604369 9604395 -135984893 + (TC)n Simple_repeat Simple_repeat 1 26 0 2030 134 17 0 chr10 9604395 9604686 -135984602 - AluSx SINE Alu -8 304 9 1736 156 64 37 chr10 9606128 9606456 -135982832 + MER1B DNA MER1_type 1 337 0 235 209 314 0 chr10 9607214 9607300 -135981988 + MIR SINE MIR 128 240 -22 300 266 75 75 chr10 9607409 9607608 -135981680 + MLT1K LTR MaLR 349 547 -41 1811 133 14 0 chr10 9607722 9608023 -135981265 - AluSx SINE Alu 0 305 1 189 349 0 32 chr10 9608121 9608184 -135981104 - L2 LINE L2 -76 3196 3136 319 242 31 47 chr10 9608756 9608792 -135980496 + CT-rich Low_complexity Low_complexity 3 38 -90 2735 88 3 0 chr10 9608792 9609155 -135980133 + THE1B LTR MaLR 1 364 0 319 242 31 47 chr10 9609155 9609246 -135980042 + CT-rich Low_complexity Low_complexity 38 128 0 905 118 0 7 chr10 9609259 9609411 -135979877 + (TTC)n Simple_repeat Simple_repeat 2 152 0 2121 133 7 0 chr10 9609450 9609752 -135979536 + AluSx SINE Alu 1 304 -8 256 345 53 35 chr10 9610082 9610195 -135979093 - L2 LINE L2 -21 3251 3137 1284 212 75 47 chr10 9610341 9610700 -135978588 - MLT1A2 LTR MaLR -5 369 1 869 218 17 6 chr10 9610882 9611056 -135978232 - MER5A DNA MER1_type -5 184 9 940 247 60 33 chr10 9611078 9611378 -135977910 + L1ME3A LINE L1 5805 6112 -58 187 404 27 76 chr10 9611449 9611672 -135977616 - L2 LINE L2 -11 3261 3050 2667 227 64 112 chr10 9612406 9613512 -135975776 - L1MC/D LINE L1 -743 5797 5002 189 0 0 0 chr10 9613512 9613533 -135975755 + (TG)n Simple_repeat Simple_repeat 2 22 0 2667 227 64 112 chr10 9613533 9614415 -135974873 - L1MC/D LINE L1 -1538 5002 4079 221 56 0 28 chr10 9614415 9614451 -135974837 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 7120 24 0 0 chr10 9614451 9615273 -135974015 - L1PA3 LINE L1 -24 6131 5310 * 9877 24 2 0 chr10 9615271 9616447 -135972841 + L1PA3 LINE L1 4125 5302 -844 509 254 55 22 chr10 9616447 9616628 -135972660 - L1MC/D LINE L1 -2449 4091 3905 541 228 17 70 chr10 9616632 9616873 -135972415 - L1MC/D LINE L1 -4809 1731 1504 1274 217 23 23 chr10 9616988 9617287 -135972001 - L1MB8 LINE L1 -9 6169 5871 262 333 0 0 chr10 9617591 9617660 -135971628 - LTR16A LTR ERVL -122 328 260 * 516 208 0 0 chr10 9617659 9617765 -135971523 + Cheshire DNA MER1_type 717 822 -1598 303 273 0 0 chr10 9617797 9617863 -135971425 - Tigger5 DNA MER2_type 0 2323 2258 * 304 146 21 0 chr10 9617859 9617907 -135971381 + Tigger5 DNA MER2_type 2272 2320 -3 * 378 222 0 25 chr10 9617907 9617987 -135971301 - Tigger5 DNA MER2_type -2245 78 1 1047 94 0 0 chr10 9617997 9618156 -135971132 + L1MA8 LINE L1 6130 6288 -3 6576 194 36 12 chr10 9618156 9619607 -135969681 + Cheshire DNA MER1_type 847 2333 -87 270 395 8 0 chr10 9620302 9620421 -135968867 - ERVL LTR ERVL -2263 3501 3382 864 371 89 12 chr10 9620441 9621193 -135968095 - ERVL LTR ERVL -2972 2792 1983 463 139 13 0 chr10 9621414 9621493 -135967795 + MADE1 DNA Mariner 1 80 0 414 0 0 0 chr10 9621682 9621728 -135967560 + (TG)n Simple_repeat Simple_repeat 2 47 0 291 332 88 36 chr10 9621750 9622024 -135967264 - ERVL LTR ERVL -4084 1680 1393 2313 142 81 51 chr10 9622771 9623265 -135966023 - LTR22 LTR ERVK 0 509 1 423 302 85 32 chr10 9623882 9623952 -135965336 - LTR33 LTR ERVL -242 279 214 2048 185 80 74 chr10 9623952 9624503 -135964785 + MLT2B3 LTR ERVL 1 554 0 423 302 85 32 chr10 9624503 9624680 -135964608 - LTR33 LTR ERVL -307 214 19 304 336 79 57 chr10 9624996 9625666 -135963622 + L1MEd LINE L1 100 784 -5335 180 0 0 0 chr10 9627968 9627988 -135961300 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 2057 155 3 23 chr10 9628367 9628716 -135960572 - MER7A DNA MER2_type -1 345 6 274 237 40 0 chr10 9629371 9629447 -135959841 + (CATA)n Simple_repeat Simple_repeat 4 82 0 443 166 30 12 chr10 9629448 9629617 -135959671 + (TA)n Simple_repeat Simple_repeat 2 173 0 298 88 77 11 chr10 9631385 9631476 -135957812 + (TA)n Simple_repeat Simple_repeat 2 98 0 269 156 78 7 chr10 9631673 9631827 -135957461 + (TA)n Simple_repeat Simple_repeat 2 166 0 419 130 82 14 chr10 9631862 9632147 -135957141 + (TA)n Simple_repeat Simple_repeat 1 304 0 1076 59 0 0 chr10 9632147 9632282 -135957006 + MER85 DNA T2_type 4 138 -1 279 94 94 0 chr10 9632376 9632472 -135956816 + (TA)n Simple_repeat Simple_repeat 1 105 0 201 343 96 22 chr10 9634862 9635040 -135954248 - L2 LINE L2 -1291 2023 1833 1983 143 7 3 chr10 9635116 9635410 -135953878 + AluSx SINE Alu 1 295 -17 4064 153 20 6 chr10 9635504 9636198 -135953090 - MER50 LTR ERV1 -30 704 1 35 63 0 0 chr10 9636410 9636473 -135952815 + AT_rich Low_complexity Low_complexity 1 63 0 1111 219 29 21 chr10 9636950 9637229 -135952059 + MER89 LTR ERV1 279 559 0 2054 116 7 3 chr10 9637270 9637577 -135951711 + AluSq SINE Alu 1 308 0 1427 201 22 43 chr10 9637829 9638198 -135951090 - MLT1A1 LTR MaLR 0 365 5 515 241 35 14 chr10 9639483 9639628 -135949660 - MIR SINE MIR -6 256 109 233 213 32 32 chr10 9640361 9640455 -135948833 + A-rich Low_complexity Low_complexity 4 97 0 315 309 46 40 chr10 9640952 9641104 -135948184 + HAL1b LINE L1 684 836 -512 1482 279 79 37 chr10 9641182 9642060 -135947228 - L1MEc LINE L1 -3563 2652 1754 1982 148 3 3 chr10 9642060 9642371 -135946917 - AluSx SINE Alu -1 311 1 1482 279 79 37 chr10 9642371 9642661 -135946627 - L1MEc LINE L1 -4461 1754 1477 259 331 47 54 chr10 9642846 9642994 -135946294 - L2 LINE L2 -1 3271 3125 184 109 22 22 chr10 9643271 9643317 -135945971 + A-rich Low_complexity Low_complexity 2 47 0 234 0 0 0 chr10 9644140 9644166 -135945122 + (GA)n Simple_repeat Simple_repeat 1 26 0 1826 122 0 4 chr10 9644346 9644593 -135944695 - AluSg SINE Alu -35 275 30 918 86 0 0 chr10 9644696 9644824 -135944464 - L1PA6 LINE L1 0 6154 6027 413 227 0 24 chr10 9644906 9645049 -135944239 + Tigger5 DNA MER2_type 1 193 -2130 439 189 0 0 chr10 9645052 9645126 -135944162 + Tigger5 DNA MER2_type 2250 2323 0 312 118 0 108 chr10 9645535 9645594 -135943694 + AluSx SINE Alu 1 44 -258 510 46 0 0 chr10 9645594 9645659 -135943629 + (TC)n Simple_repeat Simple_repeat 1 65 0 7448 62 42 2 chr10 9645683 9646353 -135942935 + LTR13 LTR ERVK 1 723 -284 213 39 0 0 chr10 9646353 9646379 -135942909 + (TC)n Simple_repeat Simple_repeat 2 27 0 7448 62 42 2 chr10 9646379 9646676 -135942612 + LTR13 LTR ERVK 723 1007 0 1592 157 4 0 chr10 9646938 9647187 -135942101 + AluSx SINE Alu 61 310 -2 1338 254 11 14 chr10 9647195 9647557 -135941731 + MLT1A1 LTR MaLR 5 365 0 26 0 0 0 chr10 9648854 9648880 -135940408 + AT_rich Low_complexity Low_complexity 1 26 0 966 92 7 7 chr10 9649370 9649511 -135939777 + L1PA11 LINE L1 6031 6171 -3 1333 221 17 20 chr10 9649700 9649994 -135939294 + AluJb SINE Alu 1 293 -19 235 209 314 0 chr10 9651732 9651818 -135937470 + MIR SINE MIR 128 240 -22 300 266 75 75 chr10 9651927 9652126 -135937162 + MLT1K LTR MaLR 349 547 -41 1798 137 14 0 chr10 9652240 9652544 -135936744 - AluSx SINE Alu 0 308 1 294 316 129 71 chr10 9652642 9652848 -135936440 - L2 LINE L2 -76 3237 3044 2202 126 0 0 chr10 9652848 9653158 -135936130 + AluSx SINE Alu 1 310 -2 294 316 129 71 chr10 9653158 9653347 -135935941 - L2 LINE L2 -269 3044 2819 2163 97 28 3 chr10 9653572 9653862 -135935426 + AluSx SINE Alu 1 297 -15 1917 102 0 4 chr10 9654498 9654752 -135934536 - AluSc SINE Alu -17 292 40 241 238 48 12 chr10 9654898 9654982 -135934306 + L1MC4 LINE L1 6609 6695 -1347 310 319 60 19 chr10 9655147 9655381 -135933907 - HERV16 LTR ERVL -2359 2637 2390 821 156 78 28 chr10 9655593 9655773 -135933515 + MLT1B LTR MaLR 1 189 -201 11675 81 1 19 chr10 9655832 9657395 -135931893 + HERVL-A1 LTR ERVL 4119 5654 0 2917 71 20 8 chr10 9657395 9657789 -135931499 + MLT2A1 LTR ERVL 1 399 -45 333 276 155 30 chr10 9657887 9658152 -135931136 + L1MC5 LINE L1 7627 7924 -37 41 58 0 0 chr10 9658887 9658956 -135930332 + AT_rich Low_complexity Low_complexity 1 69 0 13872 154 16 11 chr10 9658956 9661362 -135927926 + Tigger1 DNA MER2_type 1 2418 0 2310 85 0 3 chr10 9661490 9661783 -135927505 - AluSg SINE Alu -18 292 1 1249 286 167 20 chr10 9661801 9662592 -135926696 + L2 LINE L2 2258 3165 -148 325 301 71 27 chr10 9664951 9665134 -135924154 + MIR SINE MIR 72 262 0 24 0 0 0 chr10 9665884 9665908 -135923380 + AT_rich Low_complexity Low_complexity 1 24 0 608 327 19 56 chr10 9666030 9666406 -135922882 + L1MEc LINE L1 109 470 -5926 350 198 135 10 chr10 9666431 9666527 -135922761 - L1MEc LINE L1 -4623 1773 1666 * 912 225 67 101 chr10 9666524 9666677 -135922611 - L1M4 LINE L1 -912 5234 5077 1987 129 7 3 chr10 9666677 9666964 -135922324 - AluSx SINE Alu -24 288 1 912 225 67 101 chr10 9666964 9667317 -135921971 - L1M4 LINE L1 -1069 5077 4745 443 279 118 42 chr10 9667342 9667579 -135921709 - L1M4 LINE L1 -2800 3346 3092 1065 304 56 20 chr10 9667659 9668271 -135921017 + L1MEc LINE L1 498 1131 -5265 1456 241 98 18 chr10 9668271 9668840 -135920448 - L1M4 LINE L1 -3168 2978 2364 438 302 131 20 chr10 9669030 9669374 -135919914 + L1MEc LINE L1 1220 1601 -4614 41 48 0 0 chr10 9669423 9669485 -135919803 + AT_rich Low_complexity Low_complexity 1 62 0 189 74 0 0 chr10 9669495 9669522 -135919766 + (TAGA)n Simple_repeat Simple_repeat 4 30 0 3935 78 0 4 chr10 9669530 9670043 -135919245 - MER9 LTR ERVK 0 511 1 424 387 30 0 chr10 9670429 9670597 -135918691 + MER115 DNA AcHobo 170 342 -351 563 269 75 0 chr10 9670696 9670856 -135918432 + MER115 DNA AcHobo 522 693 0 26 0 0 0 chr10 9671123 9671149 -135918139 + AT_rich Low_complexity Low_complexity 1 26 0 1654 213 77 0 chr10 9671813 9672189 -135917099 - MER74A LTR ERVL -26 532 128 2125 150 25 11 chr10 9672264 9672623 -135916665 + THE1B LTR MaLR 1 364 0 206 125 0 25 chr10 9674019 9674059 -135915229 + (GGAA)n Simple_repeat Simple_repeat 3 41 0 587 179 0 0 chr10 9675348 9675471 -135913817 - L1MA4 LINE L1 -239 6061 5939 1129 154 21 17 chr10 9675476 9675709 -135913579 + L1MA4 LINE L1 6067 6300 0 2300 125 23 0 chr10 9675867 9676211 -135913077 - THE1B LTR MaLR 0 364 13 204 40 0 0 chr10 9676502 9676527 -135912761 + (TG)n Simple_repeat Simple_repeat 2 26 0 413 349 28 25 chr10 9678910 9679234 -135910054 - L1ME LINE L1 -372 5749 5425 491 266 36 85 chr10 9679823 9680184 -135909104 - MLT2C1 LTR ERVL -43 620 18 1135 164 65 104 chr10 9683476 9683861 -135905427 - LTR25 LTR ERV1 -10 784 415 273 197 136 0 chr10 9683829 9683895 -135905393 - MER51A LTR ERV1 -351 283 209 * 310 235 42 18 chr10 9684062 9684174 -135905114 - MER61E LTR ERV1 -484 85 1 872 239 110 0 chr10 9684254 9684589 -135904699 + Charlie1 DNA MER1_type 2390 2761 0 360 43 0 0 chr10 9684724 9684770 -135904518 + (TG)n Simple_repeat Simple_repeat 2 47 0 245 271 0 0 chr10 9684828 9684887 -135904401 - L2 LINE L2 0 3313 3255 699 230 58 26 chr10 9685332 9685523 -135903765 + MIR SINE MIR 2 198 -64 24 0 0 0 chr10 9685583 9685607 -135903681 + AT_rich Low_complexity Low_complexity 1 24 0 401 282 92 14 chr10 9685773 9685915 -135903373 + L3 LINE CR1 677 829 -748 183 336 198 0 chr10 9685957 9686073 -135903215 + L3 LINE CR1 919 1057 -520 21 71 0 0 chr10 9687237 9687279 -135902009 + AT_rich Low_complexity Low_complexity 1 42 0 216 67 0 0 chr10 9687570 9687600 -135901688 + (A)n Simple_repeat Simple_repeat 1 30 0 2261 99 0 0 chr10 9687605 9687908 -135901380 + AluSc SINE Alu 1 303 -6 1094 201 68 95 chr10 9688476 9688909 -135900379 + MLT2C2 LTR ERVL 5 425 -39 240 59 0 0 chr10 9688909 9688943 -135900345 + (CA)n Simple_repeat Simple_repeat 1 34 0 1094 201 68 95 chr10 9688943 9688982 -135900306 + MLT2C2 LTR ERVL 425 464 0 1481 125 37 0 chr10 9689548 9689803 -135899485 + AluSx SINE Alu 60 322 0 375 315 108 47 chr10 9691619 9691832 -135897456 + MLT1J LTR MaLR 1 226 -285 3177 272 41 14 chr10 9692010 9693524 -135895764 - L1MEc LINE L1 -2779 3647 2125 616 242 55 16 chr10 9693570 9693752 -135895536 - MER58A DNA MER1_type 0 224 36 247 275 71 71 chr10 9693824 9694035 -135895253 - L1MEc LINE L1 -4738 1688 1478 233 273 30 0 chr10 9694037 9694103 -135895185 + CT-rich Low_complexity Low_complexity 4 71 0 252 300 66 39 chr10 9694103 9694360 -135894928 - L1MEc LINE L1 -4920 2202 1939 758 229 45 14 chr10 9694590 9694813 -135894475 - L1MEc LINE L1 -6168 255 26 247 282 15 38 chr10 9694933 9695064 -135894224 - HAL1 LINE L1 -1352 1155 1028 411 328 53 65 chr10 9695309 9695800 -135893488 - HAL1 LINE L1 -1988 519 35 837 260 32 65 chr10 9696306 9696565 -135892723 - L1ME1 LINE L1 -134 6032 5786 1948 155 57 28 chr10 9696565 9696919 -135892369 + THE1B LTR MaLR 1 364 0 837 260 32 65 chr10 9696919 9697062 -135892226 - L1ME1 LINE L1 -380 5786 5640 189 0 0 0 chr10 9697086 9697107 -135892181 + (T)n Simple_repeat Simple_repeat 1 21 0 658 301 0 19 chr10 9697174 9697387 -135891901 - MER58A DNA MER1_type -8 216 8 328 333 39 8 chr10 9697390 9697519 -135891769 - Zaphod DNA AcHobo -3445 586 454 288 217 0 0 chr10 9697567 9697636 -135891652 + G-rich Low_complexity Low_complexity 1 69 0 1617 309 13 20 chr10 9697764 9698318 -135890970 - Zaphod DNA AcHobo -3480 551 2 280 355 45 27 chr10 9698323 9698543 -135890745 + L2 LINE L2 2684 2907 -407 22 0 0 0 chr10 9699784 9699806 -135889482 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr10 9700325 9700346 -135888942 + AT_rich Low_complexity Low_complexity 1 21 0 4272 174 66 57 chr10 9700371 9701433 -135887855 + MER11C LTR ERVK 1 1071 0 200 411 9 9 chr10 9701439 9701546 -135887742 + L2 LINE L2 3136 3242 -30 269 294 39 106 chr10 9701570 9701688 -135887600 - MIR SINE MIR -28 234 131 1995 132 20 0 chr10 9701688 9701984 -135887304 + AluSx SINE Alu 1 302 -10 269 294 39 106 chr10 9701984 9702045 -135887243 - MIR SINE MIR -131 131 67 27 0 0 0 chr10 9702302 9702329 -135886959 + AT_rich Low_complexity Low_complexity 1 27 0 188 67 33 0 chr10 9703463 9703493 -135885795 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 811 286 83 35 chr10 9703963 9704441 -135884847 - L1ME1 LINE L1 0 6166 5629 25 31 0 0 chr10 9704729 9704761 -135884527 + AT_rich Low_complexity Low_complexity 1 32 0 291 282 28 0 chr10 9705132 9705203 -135884085 - MIR3 SINE MIR -6 202 130 22 35 0 0 chr10 9705598 9705627 -135883661 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr10 9705931 9705952 -135883336 + AT_rich Low_complexity Low_complexity 1 21 0 344 289 21 72 chr10 9706770 9706964 -135882324 - L1ME3A LINE L1 -18 6152 5969 2019 136 0 17 chr10 9706969 9707271 -135882017 + AluSx SINE Alu 7 303 -9 927 305 103 25 chr10 9707358 9708351 -135880937 - L1ME3A LINE L1 -202 5960 4896 360 207 0 0 chr10 9708655 9708713 -135880575 - AluJ/FRAM SINE Alu -13 289 232 843 144 8 0 chr10 9708721 9708846 -135880442 - AluJb SINE Alu -186 126 1 567 308 87 61 chr10 9708848 9709800 -135879488 - L1ME3A LINE L1 -1587 4559 3566 1398 283 32 20 chr10 9709800 9710299 -135878989 + MLT1D LTR MaLR 1 505 0 567 308 87 61 chr10 9710299 9710592 -135878696 - L1ME3A LINE L1 -2580 3566 3282 290 325 9 0 chr10 9710944 9711058 -135878230 + L1M4 LINE L1 4052 4166 -1980 25 83 0 0 chr10 9711184 9711244 -135878044 + AT_rich Low_complexity Low_complexity 1 60 0 542 324 110 39 chr10 9711258 9711280 -135878008 + L1M4 LINE L1 4390 4409 -1737 1749 189 9 3 chr10 9711280 9711619 -135877669 + L1MC1 LINE L1 5980 6320 -13 542 324 110 39 chr10 9711619 9712189 -135877099 + L1M4 LINE L1 4409 5024 -1122 2455 71 0 7 chr10 9712224 9712533 -135876755 + AluY SINE Alu 1 307 -4 417 169 331 0 chr10 9712549 9712685 -135876603 + L1MB7 LINE L1 2334 2514 -3632 4600 209 33 38 chr10 9712703 9714884 -135874404 + L1MB7 LINE L1 4005 6165 -19 363 338 29 7 chr10 9715280 9715419 -135873869 - MIR SINE MIR -114 148 7 25 0 0 0 chr10 9716265 9716290 -135872998 + AT_rich Low_complexity Low_complexity 1 25 0 208 200 22 0 chr10 9717359 9717404 -135871884 + (TAA)n Simple_repeat Simple_repeat 1 46 0 369 350 54 8 chr10 9719564 9719804 -135869484 + MLT1L LTR MaLR 357 607 -8 2576 164 9 2 chr10 9719861 9720301 -135868987 + L1MC1 LINE L1 5356 5798 -535 312 87 0 0 chr10 9720486 9720532 -135868756 + L1MC1 LINE L1 5816 5861 -483 2203 173 30 49 chr10 9720588 9721061 -135868227 + L1MC1 LINE L1 5870 6333 0 1375 175 110 7 chr10 9721071 9721379 -135867909 - MER2 DNA MER2_type -4 340 1 1131 190 26 8 chr10 9721379 9721638 -135867650 + L1MB2 LINE L1 5903 6169 -2 254 215 15 0 chr10 9721639 9721704 -135867584 + (TA)n Simple_repeat Simple_repeat 1 66 0 761 179 8 0 chr10 9721798 9721932 -135867356 - AluSq/x SINE Alu -167 146 12 275 201 160 104 chr10 9721933 9722077 -135867211 + LTR16C LTR ERVL 332 483 -8 1617 191 133 39 chr10 9722996 9723166 -135866122 - MLT1D LTR MaLR -2 503 350 2697 10 0 0 chr10 9723166 9723465 -135865823 - AluYa5 SINE Alu -12 299 1 1617 191 133 39 chr10 9723465 9723754 -135865534 - MLT1D LTR MaLR -155 350 1 292 274 24 0 chr10 9723803 9723887 -135865401 - LTR33 LTR ERVL -10 511 426 2259 115 0 0 chr10 9725622 9725926 -135863362 + AluSx SINE Alu 2 305 -7 655 304 70 8 chr10 9726321 9726564 -135862724 - MLT1J LTR MaLR -210 301 44 8039 181 51 18 chr10 9727079 9727623 -135861665 + Tigger1 DNA MER2_type 1 526 -1892 1579 125 13 0 chr10 9727623 9727855 -135861433 + AluSg/x SINE Alu 67 301 -11 8039 181 51 18 chr10 9727855 9728992 -135860296 + Tigger1 DNA MER2_type 526 1737 -681 1876 72 4 0 chr10 9728992 9729229 -135860059 + L1P4 LINE L1 5443 5680 -488 8540 38 0 0 chr10 9729384 9731173 -135858115 - L1PA4 LINE L1 -1 6154 4351 3896 32 0 0 chr10 9731173 9731637 -135857651 + L1PA4 LINE L1 3884 4347 -1799 28 29 0 0 chr10 9731792 9731827 -135857461 + AT_rich Low_complexity Low_complexity 1 35 0 243 195 52 0 chr10 9731901 9731978 -135857310 + L1MD3 LINE L1 1478 1558 -5301 * 839 311 73 38 chr10 9731965 9732804 -135856484 + L1MD3 LINE L1 2171 3038 -4100 * 1644 74 0 0 chr10 9732803 9733018 -135856270 + L1P LINE L1 4745 4959 -1187 504 249 101 0 chr10 9733034 9733223 -135856065 + L1MD3 LINE L1 5473 5680 -1277 692 65 65 9 chr10 9733440 9733547 -135855741 + L1PA14 LINE L1 6044 6156 -5 261 212 15 0 chr10 9733560 9733626 -135855662 - Tigger1 DNA MER2_type -2351 67 1 1971 257 50 14 chr10 9733642 9734289 -135854999 + L1MD3 LINE L1 6107 6776 -2030 207 114 0 0 chr10 9734321 9734356 -135854932 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 476 262 151 7 chr10 9734373 9734652 -135854636 + L1MEc LINE L1 1914 2232 -4164 591 274 124 17 chr10 9734671 9734912 -135854376 + L1M4b LINE L1 18 284 -6575 315 277 11 119 chr10 9735036 9735296 -135853992 + L1M4b LINE L1 994 1225 -5634 1499 259 74 45 chr10 9735548 9736118 -135853170 + L1M4b LINE L1 2512 3064 -3893 1967 139 0 32 chr10 9736118 9736427 -135852861 + AluSx SINE Alu 1 299 -13 1499 259 74 45 chr10 9736427 9737076 -135852212 + L1M4b LINE L1 3064 3743 -3214 2090 116 0 0 chr10 9737077 9737354 -135851934 + AluSx SINE Alu 1 277 -35 820 331 51 31 chr10 9737480 9737933 -135851355 - LTR16B LTR ERVL 0 464 3 478 287 51 15 chr10 9737960 9738155 -135851133 - L1MEc LINE L1 -3568 2647 2446 2502 296 70 55 chr10 9738193 9739138 -135850150 - L1MEc LINE L1 -3976 2420 1491 192 77 0 0 chr10 9739138 9739164 -135850124 + (TG)n Simple_repeat Simple_repeat 2 27 0 2502 296 70 55 chr10 9739164 9740589 -135848699 - L1MEc LINE L1 -4905 1491 14 269 241 12 24 chr10 9740567 9740650 -135848638 + L1MC/D LINE L1 5705 5786 -2022 * 212 208 19 0 chr10 9740812 9740865 -135848423 + (TA)n Simple_repeat Simple_repeat 1 54 0 24 53 0 0 chr10 9742749 9742787 -135846501 + AT_rich Low_complexity Low_complexity 1 38 0 937 195 0 0 chr10 9743765 9743919 -135845369 + AluJb SINE Alu 133 286 -26 191 363 96 19 chr10 9744456 9744613 -135844675 + MIR3 SINE MIR 33 201 -7 279 71 0 0 chr10 9744852 9744894 -135844394 + (TG)n Simple_repeat Simple_repeat 2 43 0 21 82 0 0 chr10 9745156 9745205 -135844083 + AT_rich Low_complexity Low_complexity 1 49 0 1510 188 91 0 chr10 9745905 9746224 -135843064 + MER7A DNA MER2_type 1 346 0 680 303 90 34 chr10 9746352 9746619 -135842669 + LTR16C LTR ERVL 67 348 -143 29 0 0 0 chr10 9746619 9746648 -135842640 + AT_rich Low_complexity Low_complexity 1 29 0 1455 174 37 58 chr10 9746657 9746951 -135842337 - AluJo SINE Alu -24 288 1 2125 117 3 0 chr10 9746962 9747252 -135842036 - AluSp SINE Alu -11 302 12 250 218 148 92 chr10 9747253 9747395 -135841893 + LTR16C LTR ERVL 332 481 -10 911 233 110 0 chr10 9747839 9748131 -135841157 - MER33 DNA MER1_type 0 324 1 293 250 11 0 chr10 9748566 9748658 -135840630 + (CATATA)n Simple_repeat Simple_repeat 2 94 0 225 211 0 0 chr10 9748812 9748864 -135840424 + (TA)n Simple_repeat Simple_repeat 2 53 0 236 281 49 0 chr10 9748874 9748956 -135840332 - L1MC4 LINE L1 -1343 6699 6614 219 298 0 0 chr10 9748973 9749057 -135840231 + (TA)n Simple_repeat Simple_repeat 1 84 0 274 388 39 0 chr10 9749118 9749221 -135840067 - MIR SINE MIR -83 125 19 189 0 0 0 chr10 9749535 9749556 -135839732 + (CA)n Simple_repeat Simple_repeat 1 21 0 288 0 0 0 chr10 9750266 9750298 -135838990 + (GA)n Simple_repeat Simple_repeat 1 32 0 2165 98 0 7 chr10 9750920 9751229 -135838059 + AluSg SINE Alu 1 310 0 2483 80 0 3 chr10 9751708 9752046 -135837242 - L1PA13 LINE L1 -250 5913 5577 1664 83 0 0 chr10 9752046 9752272 -135837016 + L1PA13 LINE L1 5920 6147 -16 361 19 57 0 chr10 9753378 9753431 -135835857 + (TCTA)n Simple_repeat Simple_repeat 3 58 0 2175 216 31 72 chr10 9754493 9755131 -135834157 - LTR9 LTR ERV1 0 612 1 2605 157 71 39 chr10 9755534 9756068 -135833220 - MER39 LTR ERV1 -2 705 155 2078 117 7 0 chr10 9756857 9757171 -135832117 + AluSx SINE Alu 1 312 0 437 224 93 100 chr10 9758839 9759048 -135830240 - MIR SINE MIR -9 253 42 612 101 0 0 chr10 9759566 9759655 -135829633 + (GGAA)n Simple_repeat Simple_repeat 2 90 0 227 657 0 12 chr10 9759655 9759824 -135829464 + G-rich Low_complexity Low_complexity 3 169 0 472 155 29 0 chr10 9759824 9759927 -135829361 + GA-rich Low_complexity Low_complexity 1 106 0 256 116 0 23 chr10 9759934 9759977 -135829311 + (GAAA)n Simple_repeat Simple_repeat 1 42 0 1482 183 27 83 chr10 9760925 9761033 -135828255 + MLT1B LTR MaLR 1 114 -276 196 29 29 29 chr10 9761033 9761067 -135828221 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 2091 108 0 11 chr10 9761069 9761355 -135827933 - AluSx SINE Alu -29 283 1 1482 183 27 83 chr10 9761355 9761652 -135827636 + MLT1B LTR MaLR 115 386 -4 384 209 216 20 chr10 9762135 9762288 -135827000 - LTR41 LTR ERVL -590 183 1 2905 107 5 2 chr10 9762797 9763227 -135826061 - L1PB2 LINE L1 -2 6149 5719 2827 7 0 0 chr10 9763564 9763870 -135825418 - AluYb8 SINE Alu -12 306 1 44384 37 1 1 chr10 9764012 9770163 -135819125 + L1PA3 LINE L1 7 6152 -3 207 69 0 0 chr10 9770217 9770246 -135819042 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 1937 121 37 4 chr10 9771739 9772041 -135817247 - AluY SINE Alu 0 313 3 205 283 121 50 chr10 9772500 9772599 -135816689 - L2 LINE L2 0 3313 3208 790 235 25 126 chr10 9772730 9773135 -135816153 - MLT1A1 LTR MaLR 0 365 2 310 255 83 45 chr10 9773732 9773889 -135815399 + MIR SINE MIR 95 257 -5 4823 160 14 6 chr10 9773926 9774805 -135814483 + L1PB4 LINE L1 5268 6153 -3 371 259 0 82 chr10 9774942 9775089 -135814199 - L2 LINE L2 0 3313 3179 184 91 45 0 chr10 9775276 9775320 -135813968 + A-rich Low_complexity Low_complexity 2 47 0 890 188 19 0 chr10 9775350 9775510 -135813778 + MER5A DNA MER1_type 3 165 -24 1950 140 42 50 chr10 9775683 9776061 -135813227 - THE1C LTR MaLR 0 375 1 1425 240 31 11 chr10 9776258 9776616 -135812672 + MLT1A1 LTR MaLR 1 365 0 243 0 0 0 chr10 9776684 9776711 -135812577 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 591 256 59 102 chr10 9776861 9777115 -135812173 - MLT1G LTR MaLR -334 256 14 331 318 46 59 chr10 9777158 9777397 -135811891 - MLT1G-int LTR MaLR -22 1349 1114 291 303 30 20 chr10 9778177 9778276 -135811012 - MLT1G-int LTR MaLR -879 492 393 565 138 121 0 chr10 9778707 9778823 -135810465 - AluJb SINE Alu 0 312 183 1580 166 0 0 chr10 9778823 9779070 -135810218 - AluSx SINE Alu -65 247 1 375 312 80 61 chr10 9779786 9780171 -135809117 + L2 LINE L2 2616 3004 -268 715 153 0 0 chr10 9780184 9780302 -135808986 + AluJb SINE Alu 190 307 -5 1089 219 32 19 chr10 9780307 9780746 -135808542 + L1M3 LINE L1 4959 5443 -737 * 3494 183 18 37 chr10 9780733 9781521 -135807767 - L1MB1 LINE L1 -146 6043 5271 479 315 82 7 chr10 9781767 9781913 -135807375 + MER91A DNA MER1_type 30 186 -10 1267 197 15 19 chr10 9782011 9782280 -135807008 - MER65A LTR ERV1 0 445 178 462 221 13 6 chr10 9782282 9782440 -135806848 + (TA)n Simple_repeat Simple_repeat 1 159 0 719 118 146 21 chr10 9782451 9782595 -135806693 - MER65B LTR ERV1 -369 162 1 4968 248 87 43 chr10 9782595 9784300 -135804988 - MER65B-int LTR ERV1 0 4871 3092 5832 74 4 4 chr10 9784306 9785075 -135804213 - L1PA8 LINE L1 -2 6170 5402 4199 82 11 0 chr10 9785067 9785690 -135803598 + L1P LINE L1 4798 5424 -730 * 1331 216 113 94 chr10 9785698 9787264 -135802024 - MER65A-int LTR ERV1 -1475 4856 3242 2069 107 4 0 chr10 9787264 9787568 -135801720 - AluSc SINE Alu 0 306 2 1331 216 113 94 chr10 9787568 9787664 -135801624 - MER65A-int LTR ERV1 -3089 3242 3149 385 225 62 73 chr10 9787660 9787838 -135801450 - MER65A-int LTR ERV1 -6399 1721 1546 * 22 0 0 0 chr10 9787899 9787921 -135801367 + AT_rich Low_complexity Low_complexity 1 22 0 7797 205 66 57 chr10 9787949 9788668 -135800620 - MER65A-int LTR ERV1 -2377 2494 1783 333 0 0 0 chr10 9788668 9788705 -135800583 + (CA)n Simple_repeat Simple_repeat 2 38 0 7797 205 66 57 chr10 9788705 9790403 -135798885 - MER65A-int LTR ERV1 -3088 1783 54 1986 212 28 21 chr10 9790463 9790725 -135798563 - MER65A LTR ERV1 -8 437 169 357 62 0 0 chr10 9790725 9790773 -135798515 + (TG)n Simple_repeat Simple_repeat 2 49 0 1986 212 28 21 chr10 9790773 9790944 -135798344 - MER65A LTR ERV1 -276 169 1 21 36 0 0 chr10 9793247 9793275 -135796013 + AT_rich Low_complexity Low_complexity 1 28 0 1774 176 36 6 chr10 9794059 9794394 -135794894 - L1MC1 LINE L1 -6 6327 5983 390 271 43 7 chr10 9794628 9794768 -135794520 + L1MEc LINE L1 213 357 -6206 * 1607 283 90 41 chr10 9794766 9796031 -135793257 + L1MEc LINE L1 1119 2665 -3717 2283 96 0 31 chr10 9796031 9796354 -135792934 + AluSq SINE Alu 1 313 0 1607 283 90 41 chr10 9796354 9797133 -135792155 + L1MEc LINE L1 2665 3404 -2978 2257 70 0 3 chr10 9797141 9797427 -135791861 + AluY SINE Alu 1 285 -26 504 77 0 0 chr10 9797429 9797507 -135791781 + (ACATG)n Simple_repeat Simple_repeat 1 78 0 402 269 154 10 chr10 9797507 9797715 -135791573 + L1MEc LINE L1 3347 3584 -2798 730 267 82 41 chr10 9797777 9798189 -135791099 + L1M4 LINE L1 4518 4946 -1200 256 341 14 0 chr10 9798351 9798489 -135790799 + (TCTA)n Simple_repeat Simple_repeat 3 142 0 2368 147 20 0 chr10 9798489 9798884 -135790404 - MER57A LTR ERV1 0 403 1 1174 123 9 66 chr10 9798999 9799210 -135790078 - AluSg/x SINE Alu -2 310 112 25 0 0 0 chr10 9799333 9799358 -135789930 + AT_rich Low_complexity Low_complexity 1 25 0 239 29 57 0 chr10 9799643 9799678 -135789610 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 1882 109 7 4 chr10 9799687 9799961 -135789327 - AluSx SINE Alu -37 275 1 2164 78 0 3 chr10 9800492 9800794 -135788494 - AluSg SINE Alu 0 301 1 180 0 0 0 chr10 9802160 9802180 -135787108 + (TA)n Simple_repeat Simple_repeat 2 21 0 414 328 126 8 chr10 9802369 9802631 -135786657 + L1MEc LINE L1 4305 4597 -1785 305 267 97 48 chr10 9802892 9803057 -135786231 + L1MEc LINE L1 4728 4900 -1482 228 240 0 0 chr10 9803140 9803190 -135786098 + L1MEc LINE L1 5033 5082 -1300 309 317 94 15 chr10 9803215 9803556 -135785732 + L1MEc LINE L1 5139 5506 -876 30 45 0 0 chr10 9803574 9803618 -135785670 + AT_rich Low_complexity Low_complexity 1 44 0 434 332 85 5 chr10 9804454 9804677 -135784611 - L2 LINE L2 -637 2677 2437 567 291 12 0 chr10 9804777 9804942 -135784346 + MIR SINE MIR 84 250 -12 345 279 66 22 chr10 9805348 9805484 -135783804 + MIR SINE MIR 118 259 -3 539 309 22 26 chr10 9807836 9808108 -135781180 + L1ME LINE L1 244 514 -5556 * 1032 306 82 48 chr10 9808098 9809442 -135779846 - L1M4 LINE L1 -1150 4996 3607 215 190 20 20 chr10 9809574 9809674 -135779614 + (TA)n Simple_repeat Simple_repeat 1 100 0 1727 202 11 22 chr10 9809710 9810077 -135779211 - MLT2D LTR ERVL -51 363 1 5209 142 33 5 chr10 9810208 9811087 -135778201 - L1PA16 LINE L1 -9 6157 5254 1885 224 37 35 chr10 9811102 9811641 -135777647 - L1 LINE L1 -1550 4596 4057 * 5044 223 24 9 chr10 9811628 9812889 -135776399 + L1 LINE L1 2975 4253 -1893 555 207 17 0 chr10 9812876 9812992 -135776296 + L1P LINE L1 3949 4066 -2080 * 329 314 111 49 chr10 9813057 9813633 -135775655 - HAL1b LINE L1 -505 843 232 26 30 0 0 chr10 9814649 9814682 -135774606 + AT_rich Low_complexity Low_complexity 1 33 0 303 373 8 15 chr10 9814842 9814901 -135774387 - L1MEc LINE L1 -4270 2126 2068 180 111 0 0 chr10 9814901 9814928 -135774360 + (TG)n Simple_repeat Simple_repeat 2 28 0 303 373 8 15 chr10 9814928 9815002 -135774286 - L1MEc LINE L1 -4328 2068 1994 809 289 42 42 chr10 9815121 9815650 -135773638 - L1MEc LINE L1 -4438 1958 1430 456 351 46 28 chr10 9816187 9816512 -135772776 - L1MEc LINE L1 -6030 366 36 2119 175 117 44 chr10 9816533 9816925 -135772363 - MLT2B1 LTR ERVL 0 520 85 1654 169 3 44 chr10 9816925 9817244 -135772044 + AluSx SINE Alu 7 312 0 2119 175 117 44 chr10 9817244 9817331 -135771957 - MLT2B1 LTR ERVL -435 85 6 187 353 9 86 chr10 9817432 9817548 -135771740 - L2 LINE L2 -19 3253 3147 188 273 286 0 chr10 9817783 9817860 -135771428 + MIR SINE MIR 158 256 -6 1413 228 26 37 chr10 9819286 9819663 -135769625 + MLT2D LTR ERVL 1 373 -41 1003 198 100 55 chr10 9819937 9820266 -135769022 - MER2 DNA MER2_type 0 344 1 217 280 0 21 chr10 9821519 9821612 -135767676 + A-rich Low_complexity Low_complexity 5 95 0 1548 205 99 0 chr10 9822716 9822943 -135766345 - MLT1A1 LTR MaLR 0 365 93 1437 220 42 14 chr10 9822943 9823298 -135765990 + MLT1A1 LTR MaLR 1 365 0 1548 205 99 0 chr10 9823298 9823402 -135765886 - MLT1A1 LTR MaLR -272 93 1 579 286 93 20 chr10 9824161 9824384 -135764904 + L1ME3A LINE L1 5541 5746 -424 1666 187 10 7 chr10 9824384 9824678 -135764610 + AluJo SINE Alu 1 295 -17 579 286 93 20 chr10 9824678 9824852 -135764436 + L1ME3A LINE L1 5746 5967 -203 1808 180 3 0 chr10 9826041 9826341 -135762947 + AluJb SINE Alu 2 302 -10 13621 26 0 2 chr10 9827048 9828752 -135760536 - L1PA3 LINE L1 -680 5475 3775 6099 13 1 0 chr10 9828752 9829446 -135759842 + L1PA3 LINE L1 5459 6155 0 205 89 78 22 chr10 9829895 9829985 -135759303 + (TATAA)n Simple_repeat Simple_repeat 5 99 0 415 325 32 4 chr10 9831639 9831888 -135757400 + L1MEc LINE L1 1229 1484 -4912 21 0 0 0 chr10 9831892 9831913 -135757375 + AT_rich Low_complexity Low_complexity 1 21 0 6973 64 4 2 chr10 9831913 9833598 -135755690 - L1PA7 LINE L1 -11 6143 4457 305 191 36 48 chr10 9833613 9833697 -135755591 - L1M4 LINE L1 -3951 2195 2113 938 117 0 0 chr10 9833707 9833835 -135755453 - AluSq/x SINE Alu -179 133 6 455 165 0 0 chr10 9833839 9833918 -135755370 - Tigger1 DNA MER2_type -503 1915 1837 6865 156 33 3 chr10 9833928 9834756 -135754532 - Tigger1 DNA MER2_type -1209 1209 333 213 39 0 0 chr10 9834756 9834782 -135754506 + (GA)n Simple_repeat Simple_repeat 1 26 0 6865 156 33 3 chr10 9834782 9835126 -135754162 - Tigger1 DNA MER2_type -2085 333 1 323 303 80 74 chr10 9835521 9835845 -135753443 - L1M4 LINE L1 -2329 3817 3492 1258 156 30 82 chr10 9835866 9836135 -135753153 - Tigger1 DNA MER2_type -1920 498 244 2112 238 57 52 chr10 9836223 9837918 -135751370 + L1ME1 LINE L1 114 2015 -4549 1703 225 20 6 chr10 9837920 9838275 -135751013 - MLT1A1 LTR MaLR -2 363 4 21 0 0 0 chr10 9838278 9838299 -135750989 + AT_rich Low_complexity Low_complexity 1 21 0 734 268 71 11 chr10 9838419 9838799 -135750489 + L1ME1 LINE L1 2191 2593 -3971 2053 100 7 0 chr10 9838801 9839072 -135750216 + AluSc SINE Alu 19 291 -18 349 281 123 79 chr10 9839098 9839553 -135749735 - HAL1 LINE L1 -1088 1419 945 1492 208 18 3 chr10 9839560 9839844 -135749444 - AluJb SINE Alu -24 288 1 2799 10 0 0 chr10 9840069 9840377 -135748911 + AluYa5 SINE Alu 1 308 -3 203 315 63 75 chr10 9841295 9841475 -135747813 - MIR SINE MIR -34 174 45 2185 164 55 26 chr10 9842982 9843402 -135745886 + Tigger2a DNA MER2_type 3 434 0 954 196 122 86 chr10 9843461 9843797 -135745491 + MLT1B LTR MaLR 43 390 0 2302 263 88 13 chr10 9843815 9845624 -135743664 + L1ME1 LINE L1 4640 6580 -4 189 74 0 0 chr10 9845630 9845657 -135743631 + (A)n Simple_repeat Simple_repeat 1 27 0 203 179 15 60 chr10 9845665 9845732 -135743556 + T-rich Low_complexity Low_complexity 3 66 0 932 339 102 28 chr10 9845759 9846050 -135743238 - L2 LINE L2 -54 3259 2991 1890 190 11 6 chr10 9846050 9846413 -135742875 + MLT1A1 LTR MaLR 1 365 0 932 339 102 28 chr10 9846413 9846876 -135742412 - L2 LINE L2 -322 2991 2425 2029 102 3 66 chr10 9847298 9847630 -135741658 + AluSp SINE Alu 1 311 -2 470 279 32 93 chr10 9849333 9849645 -135739643 + MLT1I LTR MaLR 99 391 -18 21 100 0 0 chr10 9850238 9850308 -135738980 + AT_rich Low_complexity Low_complexity 1 70 0 917 130 0 0 chr10 9850921 9851052 -135738236 - FLAM_C SINE Alu -2 131 1 327 336 37 30 chr10 9851291 9851425 -135737863 + MIR SINE MIR 17 151 -111 474 18 0 0 chr10 9851564 9851619 -135737669 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 236 302 0 0 chr10 9851688 9851774 -135737514 - L1MC4 LINE L1 -1342 6700 6615 294 106 0 0 chr10 9851774 9851821 -135737467 + (CATATA)n Simple_repeat Simple_repeat 2 48 0 21 0 0 0 chr10 9851938 9851959 -135737329 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr10 9852867 9852898 -135736390 + AT_rich Low_complexity Low_complexity 1 31 0 1641 262 134 65 chr10 9854481 9855525 -135733763 + L1MC4a LINE L1 5520 6660 -1148 2502 74 0 0 chr10 9855525 9855836 -135733452 + AluY SINE Alu 1 311 0 1641 262 134 65 chr10 9855836 9855999 -135733289 + L1MC4a LINE L1 6660 6810 -998 834 198 0 0 chr10 9856004 9856181 -135733107 + GA-rich Low_complexity Low_complexity 1 177 0 424 273 148 53 chr10 9856193 9856721 -135732567 + L1MC4 LINE L1 6926 7503 -539 255 355 82 24 chr10 9856904 9857145 -135732143 - L2 LINE L2 -228 3085 2767 21 57 0 0 chr10 9857604 9857639 -135731649 + AT_rich Low_complexity Low_complexity 1 35 0 315 263 13 0 chr10 9859881 9859957 -135729331 + MLT1A2 LTR MaLR 254 330 -44 4135 142 32 17 chr10 9859967 9861151 -135728137 - Tigger1 DNA MER2_type -1117 1301 5 4603 233 33 38 chr10 9861283 9862812 -135726476 + L1MB7 LINE L1 3689 5225 -959 2733 16 0 10 chr10 9862812 9863124 -135726164 + AluYb8 SINE Alu 1 309 -9 4603 233 33 38 chr10 9863124 9863773 -135725515 + L1MB7 LINE L1 5225 5846 -338 2263 138 28 0 chr10 9863773 9864127 -135725161 + THE1B LTR MaLR 1 364 0 4603 233 33 38 chr10 9864127 9864454 -135724834 + L1MB7 LINE L1 5846 6173 -11 513 180 0 40 chr10 9864610 9864710 -135724578 + MLT1B LTR MaLR 3 98 -292 256 89 89 0 chr10 9864701 9864746 -135724542 - MADE1 DNA Mariner -31 49 1 * 2871 165 20 60 chr10 9864746 9865229 -135724059 + LTR9 LTR ERV1 1 455 -157 444 19 0 0 chr10 9865229 9865282 -135724006 + (TC)n Simple_repeat Simple_repeat 1 53 0 2871 165 20 60 chr10 9865282 9865435 -135723853 + LTR9 LTR ERV1 455 612 0 26 98 0 0 chr10 9866116 9866198 -135723090 + AT_rich Low_complexity Low_complexity 1 82 0 288 324 85 28 chr10 9866333 9866509 -135722779 - MIR SINE MIR -72 190 5 1828 170 0 0 chr10 9866850 9867162 -135722126 - AluJo SINE Alu 0 312 1 1871 204 68 70 chr10 9867252 9867807 -135721481 - MLT2B3 LTR ERVL 0 554 1 2845 167 22 18 chr10 9867910 9868460 -135720828 + MER39B LTR ERV1 102 653 0 310 296 44 30 chr10 9868460 9868595 -135720693 + L1M4 LINE L1 4905 5041 -1105 331 199 24 65 chr10 9868648 9868781 -135720507 + L1M4 LINE L1 5171 5295 -851 295 311 180 19 chr10 9868804 9868965 -135720323 + MIR SINE MIR 51 237 -25 391 349 48 4 chr10 9869019 9869248 -135720040 + L3 LINE CR1 1215 1453 -124 240 354 0 0 chr10 9869452 9869531 -135719757 + L3 LINE CR1 1489 1567 -10 1982 184 26 16 chr10 9871922 9872307 -135716981 - LTR45B LTR ERV1 -97 392 4 299 323 23 15 chr10 9873809 9873939 -135715349 - MLT1F1-int LTR MaLR -549 822 692 728 266 30 69 chr10 9874188 9874332 -135714956 - MLT1F1-int LTR MaLR -760 611 463 2136 97 4 0 chr10 9874332 9874650 -135714638 + AluSq SINE Alu 5 323 0 728 266 30 69 chr10 9874650 9874839 -135714449 - MLT1F1-int LTR MaLR -908 463 290 276 274 145 16 chr10 9874865 9874989 -135714299 - MLT1F1-int LTR MaLR -1229 142 3 533 306 55 74 chr10 9875017 9875350 -135713938 - MLT1F1 LTR MaLR -60 531 186 1860 151 3 3 chr10 9875350 9875701 -135713587 - AluSc SINE Alu 0 309 1 533 306 55 74 chr10 9875701 9875884 -135713404 - MLT1F1 LTR MaLR -405 186 1 646 309 13 91 chr10 9875889 9876439 -135712849 - L1ME3A LINE L1 -213 5957 5451 478 300 100 91 chr10 9876441 9877061 -135712227 - L2 LINE L2 -5 3308 2670 1215 338 157 39 chr10 9877067 9878766 -135710522 - L2 LINE L2 -1093 2221 363 1929 143 0 7 chr10 9879167 9879461 -135709827 - AluSx SINE Alu -20 292 1 22 0 0 0 chr10 9881114 9881136 -135708152 + AT_rich Low_complexity Low_complexity 1 22 0 409 341 15 0 chr10 9881660 9881795 -135707493 + MIR SINE MIR 12 148 -114 324 346 59 0 chr10 9882152 9882288 -135707000 - MLT2E LTR ERVL -453 175 32 1523 178 117 38 chr10 9882667 9883060 -135706228 - MSTC LTR MaLR -4 424 1 471 316 83 9 chr10 9883371 9883589 -135705699 + MIR SINE MIR 2 235 -27 747 160 73 0 chr10 9885367 9885517 -135703771 - L1MB3 LINE L1 -38 6145 5985 420 262 5 2 chr10 9885515 9885625 -135703663 - L1ME3A LINE L1 -758 5422 5311 * 50 71 0 0 chr10 9885775 9885874 -135703414 + AT_rich Low_complexity Low_complexity 1 99 0 249 264 27 9 chr10 9885998 9886108 -135703180 + L1M4 LINE L1 2903 3014 -3132 394 271 128 53 chr10 9886271 9886592 -135702696 + L1MCc LINE L1 91 435 -5988 1510 291 67 30 chr10 9886791 9888049 -135701239 + L1MCc LINE L1 798 2107 -4834 264 100 0 0 chr10 9888078 9888118 -135701170 + (CA)n Simple_repeat Simple_repeat 2 41 0 369 348 62 25 chr10 9888131 9888484 -135700804 - L1MEc LINE L1 -5954 442 77 23 33 0 0 chr10 9888595 9888625 -135700663 + AT_rich Low_complexity Low_complexity 1 30 0 22 56 0 0 chr10 9889461 9889497 -135699791 + AT_rich Low_complexity Low_complexity 1 36 0 246 336 64 36 chr10 9890920 9891030 -135698258 + L2 LINE L2 3155 3267 -5 462 61 0 0 chr10 9891932 9891998 -135697290 + (CA)n Simple_repeat Simple_repeat 2 67 0 1680 269 108 29 chr10 9892044 9892998 -135696290 - L1ME3A LINE L1 -1333 4813 3785 1158 231 141 104 chr10 9892998 9893487 -135695801 + MER39 LTR ERV1 8 682 -25 922 265 94 52 chr10 9893497 9894366 -135694922 - L1ME3A LINE L1 -2351 3795 2869 232 217 36 12 chr10 9894612 9894695 -135694593 - L1MC4 LINE L1 -1341 6701 6617 220 307 40 27 chr10 9894775 9894850 -135694438 + MIR SINE MIR 153 228 -34 1618 187 13 0 chr10 9895805 9896110 -135693178 + AluSg SINE Alu 1 309 -1 1738 184 0 0 chr10 9897025 9897324 -135691964 - AluSx SINE Alu -13 299 1 2356 117 5 24 chr10 9897468 9897837 -135691451 + THE1B LTR MaLR 3 364 0 312 60 116 0 chr10 9898642 9898699 -135690589 - MLT2A2 LTR ERVL 0 453 400 391 209 26 0 chr10 9898709 9898985 -135690303 + (TA)n Simple_repeat Simple_repeat 1 283 0 332 217 27 0 chr10 9899007 9899274 -135690014 + (TA)n Simple_repeat Simple_repeat 1 274 0 459 0 0 0 chr10 9900653 9900704 -135688584 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 816 320 74 27 chr10 9901687 9902134 -135687154 + L1MCc LINE L1 19 486 -5937 743 296 155 33 chr10 9902362 9903007 -135686281 + L1MCc LINE L1 812 1535 -4888 801 213 100 12 chr10 9903039 9903288 -135686000 + L1M4 LINE L1 3382 3652 -2494 213 301 126 10 chr10 9903786 9903889 -135685399 + MIR SINE MIR 69 183 -79 1145 200 68 13 chr10 9903889 9904124 -135685164 + AluJb SINE Alu 1 248 -64 1913 87 12 0 chr10 9904124 9904378 -135684910 + AluSp SINE Alu 30 286 -27 288 70 0 0 chr10 9904378 9904421 -135684867 + (TTAAA)n Simple_repeat Simple_repeat 3 45 0 270 0 0 0 chr10 9904438 9904468 -135684820 + (CA)n Simple_repeat Simple_repeat 1 30 0 1886 171 47 0 chr10 9904473 9904813 -135684475 - Tigger3(Golem) DNA MER2_type -2 3027 2672 274 269 0 0 chr10 9904809 9904861 -135684427 - Tigger3(Golem) DNA MER2_type -2976 53 2 * 252 0 0 0 chr10 9904905 9904933 -135684355 + (TG)n Simple_repeat Simple_repeat 2 29 0 4476 194 27 17 chr10 9905049 9906026 -135683262 - L1MC2 LINE L1 -2 6760 5775 6874 223 78 25 chr10 9906030 9910201 -135679087 - L1MC2 LINE L1 -1661 4903 513 1771 156 43 18 chr10 9910205 9910533 -135678755 + MER44D DNA MER2_type 1 606 -3 1752 255 63 17 chr10 9910535 9911072 -135678216 - L1MC2 LINE L1 -5837 727 166 281 299 10 0 chr10 9911456 9911553 -135677735 + Charlie7 DNA MER1_type 2515 2612 0 357 319 43 7 chr10 9912190 9912328 -135676960 - MIR3 SINE MIR -18 190 48 1088 228 26 111 chr10 9912328 9912780 -135676508 + MLT2D LTR ERVL 1 414 0 245 228 54 0 chr10 9913235 9913327 -135675961 + (TA)n Simple_repeat Simple_repeat 2 98 0 22 35 0 0 chr10 9913519 9913548 -135675740 + AT_rich Low_complexity Low_complexity 1 29 0 1943 135 28 0 chr10 9913643 9913931 -135675357 - AluSx SINE Alu -16 296 1 21 36 0 0 chr10 9913936 9913964 -135675324 + AT_rich Low_complexity Low_complexity 1 28 0 1988 136 3 17 chr10 9914022 9914342 -135674946 + AluSx SINE Alu 1 312 0 2135 278 178 43 chr10 9915670 9916888 -135672400 - L2 LINE L2 -1137 2177 795 250 350 34 0 chr10 9916943 9917060 -135672228 + L2 LINE L2 3193 3313 0 23 0 0 0 chr10 9918238 9918261 -135671027 + AT_rich Low_complexity Low_complexity 1 23 0 241 234 117 32 chr10 9918264 9918358 -135670930 - HAL1b LINE L1 -866 482 381 193 161 0 36 chr10 9918864 9918920 -135670368 + CT-rich Low_complexity Low_complexity 3 56 0 30 27 0 0 chr10 9920910 9920947 -135668341 + AT_rich Low_complexity Low_complexity 1 37 0 2465 63 0 0 chr10 9920949 9921248 -135668040 + AluY SINE Alu 1 299 -12 287 263 61 53 chr10 9922736 9922850 -135666438 - L2 LINE L2 -189 3083 2969 2338 99 25 25 chr10 9924230 9924593 -135664695 + THE1B LTR MaLR 2 364 0 10680 121 6 13 chr10 9924593 9926184 -135663104 + THE1B-int LTR MaLR 1 1580 0 2492 100 5 24 chr10 9926184 9926555 -135662733 + THE1B LTR MaLR 1 364 0 229 282 203 42 chr10 9926844 9927085 -135662203 + L1MEd LINE L1 4 283 -5836 222 143 0 0 chr10 9927253 9927302 -135661986 + (CA)n Simple_repeat Simple_repeat 2 50 0 942 246 106 38 chr10 9927472 9927736 -135661552 + L1ME LINE L1 356 637 -6222 617 120 19 0 chr10 9927733 9927956 -135661332 + L1ME LINE L1 1346 1607 -5252 * 331 231 30 45 chr10 9927971 9928105 -135661183 + L1ME LINE L1 1778 1909 -4946 66 35 0 0 chr10 9928112 9928199 -135661089 + AT_rich Low_complexity Low_complexity 1 87 0 685 259 110 69 chr10 9928204 9928594 -135660694 + L1ME LINE L1 1946 2351 -4608 34 42 0 0 chr10 9928606 9928654 -135660634 + AT_rich Low_complexity Low_complexity 1 48 0 228 163 0 0 chr10 9928654 9928697 -135660591 + (CA)n Simple_repeat Simple_repeat 2 44 0 466 308 118 39 chr10 9929001 9929407 -135659881 + L1ME LINE L1 2565 3002 -4136 406 261 149 22 chr10 9929455 9929786 -135659502 + L1ME LINE L1 4006 4378 -2579 1820 174 3 0 chr10 9929801 9930105 -135659183 + AluSx SINE Alu 3 307 -5 796 165 80 58 chr10 9930113 9930301 -135658987 - L1PB4 LINE L1 -13 6143 5952 3254 223 22 39 chr10 9930302 9931264 -135658024 + L1ME LINE L1 4356 5301 -1656 21 36 0 0 chr10 9931280 9931308 -135657980 + AT_rich Low_complexity Low_complexity 1 28 0 537 305 106 25 chr10 9931726 9932132 -135657156 + L1ME LINE L1 6186 6624 -349 1291 278 122 33 chr10 9932175 9932718 -135656570 - MLT1G1 LTR MaLR -2 593 3 221 276 0 0 chr10 9932799 9932857 -135656431 + (TA)n Simple_repeat Simple_repeat 1 58 0 230 314 91 16 chr10 9935177 9935298 -135653990 + MLT2E LTR ERVL 74 203 -425 2115 106 17 0 chr10 9936032 9936324 -135652964 - AluSx SINE Alu -15 297 1 493 236 17 112 chr10 9937025 9937080 -135652208 + MLT1E LTR MaLR 71 130 -463 2285 103 3 0 chr10 9937080 9937391 -135651897 + AluSx SINE Alu 1 312 0 493 236 17 112 chr10 9937391 9937513 -135651775 + MLT1E LTR MaLR 130 231 -362 830 248 133 5 chr10 9937536 9937754 -135651534 + MLT1E LTR MaLR 348 593 0 233 286 62 54 chr10 9937818 9937930 -135651358 - LTR50 LTR ERVL -658 137 25 1464 328 54 33 chr10 9938270 9939236 -135650052 - HERVL LTR ERVL -394 5370 4385 664 269 83 16 chr10 9939222 9939475 -135649813 - HERVL LTR ERVL -1635 4019 3750 * 815 311 20 23 chr10 9939505 9939810 -135649478 - HERVL LTR ERVL -2068 3696 3393 1726 200 113 39 chr10 9939812 9940273 -135649015 + MLT1D LTR MaLR 9 503 -2 309 293 104 80 chr10 9940495 9940833 -135648455 - HERVL LTR ERVL -4105 1549 1204 24 32 0 0 chr10 9940864 9940895 -135648393 + AT_rich Low_complexity Low_complexity 1 31 0 188 349 16 0 chr10 9941706 9941769 -135647519 - L2 LINE L2 -694 2620 2557 22 35 0 0 chr10 9942205 9942234 -135647054 + AT_rich Low_complexity Low_complexity 1 29 0 181 256 98 73 chr10 9942665 9942747 -135646541 - MER5B DNA MER1_type -38 140 57 970 219 72 64 chr10 9944484 9944862 -135644426 - L1ME2 LINE L1 -20 6144 5758 1237 235 140 40 chr10 9944862 9945334 -135643954 - LTR40a LTR ERVL 0 519 1 970 219 72 64 chr10 9945334 9945366 -135643922 - L1ME2 LINE L1 -406 5758 5728 1539 223 61 158 chr10 9945513 9946986 -135642302 - L1ME2 LINE L1 -1898 4248 2919 754 293 96 77 chr10 9947026 9947572 -135641716 + L2 LINE L2 2748 3311 -2 368 285 101 67 chr10 9948009 9948276 -135641012 + HAL1 LINE L1 1356 1631 -876 290 299 106 18 chr10 9948298 9948572 -135640716 + L1ME3A LINE L1 3273 3570 -2576 203 170 21 0 chr10 9948572 9948619 -135640669 + GA-rich Low_complexity Low_complexity 1 48 0 554 278 114 31 chr10 9948721 9948954 -135640334 + L1ME3A LINE L1 4362 4574 -1572 2867 0 0 0 chr10 9948954 9949265 -135640023 + AluYa5 SINE Alu 1 311 0 554 278 114 31 chr10 9949265 9949477 -135639811 + L1ME3A LINE L1 4574 4844 -1302 389 302 84 36 chr10 9949596 9949960 -135639328 + L1ME3A LINE L1 5000 5391 -755 242 248 74 27 chr10 9950164 9950313 -135638975 - L1M4 LINE L1 -1613 4533 4378 * 504 291 147 16 chr10 9950295 9950676 -135638612 + L1ME3A LINE L1 5539 5962 -208 2266 93 0 0 chr10 9951501 9951820 -135637468 - AluY SINE Alu 0 311 1 2190 114 10 0 chr10 9951883 9952189 -135637099 - AluSx SINE Alu 0 312 4 23 0 0 0 chr10 9952646 9952669 -135636619 + AT_rich Low_complexity Low_complexity 1 23 0 281 352 31 8 chr10 9952688 9952816 -135636472 - L2 LINE L2 -358 2955 2825 30 0 0 0 chr10 9953526 9953556 -135635732 + AT_rich Low_complexity Low_complexity 1 30 0 1558 206 7 0 chr10 9953614 9953924 -135635364 - AluSx SINE Alu 0 312 1 3914 221 43 39 chr10 9954131 9954616 -135634672 + L1MC3 LINE L1 5123 5604 -542 1705 156 46 38 chr10 9954616 9954988 -135634300 + THE1C LTR MaLR 1 375 0 3914 221 43 39 chr10 9954988 9955655 -135633633 + L1MC3 LINE L1 5604 5250 -896 675 156 0 0 chr10 9955655 9955777 -135633511 + L1PA15 LINE L1 6041 6162 -3 3914 221 43 39 chr10 9955777 9955932 -135633356 + L1MC3 LINE L1 5249 5402 -744 2763 201 100 50 chr10 9955921 9956798 -135632490 + L1MC3 LINE L1 6840 7760 -25 * 505 544 5 10 chr10 9956796 9957002 -135632286 + L1PA5 LINE L1 5950 6154 0 * 52 17 0 0 chr10 9957008 9957067 -135632221 + AT_rich Low_complexity Low_complexity 1 59 0 350 270 51 67 chr10 9957108 9957511 -135631777 - L1MCa LINE L1 -4779 1942 1347 386 248 263 28 chr10 9957552 9957875 -135631413 - L1MCa LINE L1 -5077 1453 1055 2005 126 84 18 chr10 9957882 9958215 -135631073 - THE1C LTR MaLR 0 375 21 333 47 0 0 chr10 9958821 9958864 -135630424 + (TG)n Simple_repeat Simple_repeat 1 43 0 357 149 0 0 chr10 9958864 9958931 -135630357 - MER41A LTR ERV1 -93 461 395 279 0 0 0 chr10 9959989 9960020 -135629268 + (CA)n Simple_repeat Simple_repeat 2 32 0 221 214 36 0 chr10 9960220 9960276 -135629012 - L2 LINE L2 -9 3304 3247 250 327 38 69 chr10 9960710 9960869 -135628419 - L2 LINE L2 -3 3269 3116 213 401 30 0 chr10 9961165 9961297 -135627991 - L2 LINE L2 -676 2638 2503 1189 192 62 32 chr10 9961570 9961926 -135627362 + MSTC LTR MaLR 26 428 0 26 0 0 0 chr10 9962299 9962325 -135626963 + AT_rich Low_complexity Low_complexity 1 26 0 1922 142 0 23 chr10 9963111 9963414 -135625874 + AluSx SINE Alu 1 296 -16 254 85 0 21 chr10 9963417 9963464 -135625824 + (TAAA)n Simple_repeat Simple_repeat 4 49 0 2212 111 0 0 chr10 9964408 9964705 -135624583 + AluSc SINE Alu 2 298 -11 199 162 54 0 chr10 9964776 9964813 -135624475 + MIR SINE MIR 115 153 -109 1272 169 56 26 chr10 9965368 9965635 -135623653 + AluJo SINE Alu 21 295 -17 246 62 0 0 chr10 9965635 9965667 -135623621 + (GA)n Simple_repeat Simple_repeat 1 32 0 232 295 103 0 chr10 9966126 9966204 -135623084 - MIR SINE MIR -70 138 53 591 323 42 5 chr10 9966426 9966643 -135622645 - MIR SINE MIR -4 258 34 1112 297 7 51 chr10 9968073 9968487 -135620801 - L1MCa LINE L1 -6126 414 19 316 346 70 25 chr10 9968566 9968809 -135620479 + L1ME LINE L1 5493 5746 -375 21 0 0 0 chr10 9968830 9968851 -135620437 + AT_rich Low_complexity Low_complexity 1 21 0 37 69 0 0 chr10 9968929 9969001 -135620287 + AT_rich Low_complexity Low_complexity 1 72 0 305 345 9 0 chr10 9969132 9969242 -135620046 - HAL1 LINE L1 -812 1695 1585 296 143 18 0 chr10 9969379 9969435 -135619853 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 2511 128 5 0 chr10 9970950 9971332 -135617956 - L1PA15 LINE L1 -1 6164 5781 1399 198 43 3 chr10 9971338 9971666 -135617622 + L1MC1 LINE L1 5993 6333 0 23 0 0 0 chr10 9971787 9971810 -135617478 + AT_rich Low_complexity Low_complexity 1 23 0 186 43 0 0 chr10 9972420 9972443 -135616845 + (GA)n Simple_repeat Simple_repeat 2 24 0 309 358 49 7 chr10 9972941 9973226 -135616062 + L1M4 LINE L1 4757 5053 -1093 706 229 41 64 chr10 9973281 9973548 -135615740 - L1MEc LINE L1 -2099 4116 3856 8086 34 38 0 chr10 9973597 9974617 -135614671 + L1P LINE L1 2799 3857 -2289 2118 251 71 28 chr10 9974672 9975560 -135613728 - L1MEc LINE L1 -3919 2477 1552 206 326 11 21 chr10 9976286 9976381 -135612907 + GA-rich Low_complexity Low_complexity 1 94 0 1833 141 50 0 chr10 9976883 9977180 -135612108 + AluSx SINE Alu 1 312 0 34 0 0 0 chr10 9978365 9978399 -135610889 + AT_rich Low_complexity Low_complexity 1 34 0 1870 279 89 45 chr10 9978406 9979580 -135609708 - L1MEc LINE L1 -4839 1557 333 1523 205 70 63 chr10 9979594 9980082 -135609206 - MLT1D LTR MaLR -2 503 13 848 306 46 7 chr10 9980099 9980380 -135608908 - L1MEc LINE L1 -6077 319 28 263 239 62 31 chr10 9981396 9981574 -135607714 - L1M4 LINE L1 -395 5779 5594 383 279 88 42 chr10 9981587 9981836 -135607452 - L1M4 LINE L1 -683 5479 5219 493 295 78 34 chr10 9981889 9982302 -135606986 - L1ME2 LINE L1 -309 5855 5425 1213 286 39 30 chr10 9982320 9983010 -135606278 - L1ME2 LINE L1 -769 5377 4682 244 293 44 49 chr10 9983749 9983954 -135605334 + L1ME LINE L1 5526 5729 -392 27 73 0 0 chr10 9984134 9984189 -135605099 + AT_rich Low_complexity Low_complexity 1 55 0 1435 80 0 5 chr10 9984190 9984390 -135604898 - L1PA13 LINE L1 -7 6156 5958 3396 99 4 29 chr10 9984390 9984905 -135604383 + L1PA13 LINE L1 5440 5941 -222 547 277 7 0 chr10 9984965 9985106 -135604182 - L1ME LINE L1 -445 5719 5578 180 111 0 0 chr10 9985399 9985426 -135603862 + (TG)n Simple_repeat Simple_repeat 2 28 0 313 114 45 11 chr10 9986193 9986281 -135603007 + (TA)n Simple_repeat Simple_repeat 1 91 0 3875 245 52 11 chr10 9986356 9987830 -135601458 + L1M3a LINE L1 1 1540 -4495 390 312 87 74 chr10 9989432 9989973 -135599315 - L2 LINE L2 -836 2478 1931 536 278 106 8 chr10 9991880 9992135 -135597153 + L1M4 LINE L1 1803 2082 -5381 310 214 0 24 chr10 9992155 9992239 -135597049 + L1M4 LINE L1 2482 2563 -5004 463 289 17 30 chr10 9992547 9992782 -135596506 + L1ME2 LINE L1 2014 2245 -5310 31 26 0 0 chr10 9992782 9992820 -135596468 + AT_rich Low_complexity Low_complexity 1 38 0 496 289 69 47 chr10 9992820 9993523 -135595765 + L1ME2 LINE L1 2524 3293 -4453 302 273 52 47 chr10 9993694 9993926 -135595362 + L1ME2 LINE L1 3518 3710 -3855 991 262 124 2 chr10 9994031 9994489 -135594799 + L1ME2 LINE L1 3692 4205 -3360 227 250 34 0 chr10 9994493 9994581 -135594707 + L1ME2 LINE L1 4279 4369 -3196 2254 236 100 28 chr10 9994757 9995681 -135593607 + L1ME2 LINE L1 6572 7564 -19 31 44 0 0 chr10 9995932 9995977 -135593311 + AT_rich Low_complexity Low_complexity 1 45 0 360 64 0 0 chr10 9996382 9996429 -135592859 + (TG)n Simple_repeat Simple_repeat 2 48 0 221 376 20 10 chr10 9996449 9996550 -135592738 + MIR SINE MIR 151 252 -10 492 326 47 51 chr10 9997477 9998008 -135591280 - ERVL LTR ERVL -777 4353 3694 1579 351 37 47 chr10 9998067 9999204 -135590084 - ERVL LTR ERVL -1846 3918 2793 340 254 30 83 chr10 9999375 9999544 -135589744 + MER41B LTR ERV1 112 425 -210 948 311 79 70 chr10 9999758 10000197 -135589091 - ERVL LTR ERVL -2249 2747 2298 1798 175 7 7 chr10 10000197 10000506 -135588782 - AluSx SINE Alu -3 309 1 948 311 79 70 chr10 10000506 10000737 -135588551 - ERVL LTR ERVL -2698 2298 2071 1195 263 67 40 chr10 10000763 10001208 -135588080 - ERVL LTR ERVL -3615 1381 925 1311 176 113 60 chr10 10001371 10001741 -135587547 - MLT1B LTR MaLR 0 390 1 2033 128 7 0 chr10 10002256 10002552 -135586736 - AluSg SINE Alu -12 298 1 2172 193 29 2 chr10 10002779 10003188 -135586100 - MSTB LTR MaLR -2 424 5 390 333 45 35 chr10 10003282 10003570 -135585718 - LTR16B LTR ERVL -171 293 3 856 95 0 16 chr10 10004090 10004255 -135585033 - AluSg/x SINE Alu 0 351 189 218 276 143 78 chr10 10005129 10005346 -135583942 - MIR SINE MIR -12 250 20 25 65 0 0 chr10 10006124 10006170 -135583118 + AT_rich Low_complexity Low_complexity 1 46 0 288 345 0 9 chr10 10006602 10006712 -135582576 - MIR SINE MIR -123 139 31 288 53 0 0 chr10 10008885 10008923 -135580365 + (TG)n Simple_repeat Simple_repeat 1 38 0 1759 98 15 15 chr10 10009872 10010136 -135579152 + AluSg SINE Alu 39 302 -8 22 56 0 0 chr10 10010216 10010252 -135579036 + AT_rich Low_complexity Low_complexity 1 36 0 225 0 0 0 chr10 10010503 10010528 -135578760 + (TG)n Simple_repeat Simple_repeat 1 25 0 2383 57 0 17 chr10 10010668 10010968 -135578320 - AluY SINE Alu -16 295 1 192 282 64 51 chr10 10010989 10011067 -135578221 + L2 LINE L2 1876 1954 -1360 202 352 119 19 chr10 10011148 10011307 -135577981 + MIR SINE MIR 26 200 -62 465 277 95 84 chr10 10011335 10011714 -135577574 - MLT1I LTR MaLR -13 396 14 243 0 0 0 chr10 10012356 10012383 -135576905 + (CA)n Simple_repeat Simple_repeat 2 28 0 219 114 0 0 chr10 10012437 10012472 -135576816 + (TA)n Simple_repeat Simple_repeat 2 36 0 1305 266 113 10 chr10 10012489 10012580 -135576708 + L1MEc LINE L1 22 102 -6294 2232 102 0 0 chr10 10012580 10012874 -135576414 + AluSc SINE Alu 1 294 -15 1305 266 113 10 chr10 10012874 10013305 -135575983 + L1MEc LINE L1 102 598 -5798 2307 259 118 27 chr10 10013327 10014978 -135574310 + L1MEc LINE L1 714 1920 -4295 1522 176 7 33 chr10 10014978 10015279 -135574009 - AluJo SINE Alu -8 304 12 2307 259 118 27 chr10 10015279 10016353 -135572935 + L1MEc LINE L1 1920 2894 -3321 558 267 37 42 chr10 10016351 10016568 -135572720 + L1ME LINE L1 1853 2068 -4328 * 864 174 6 23 chr10 10016731 10016903 -135572385 - AluSc SINE Alu -140 169 1 324 284 90 76 chr10 10017004 10017215 -135572073 + L1MC4a LINE L1 5689 5902 -1906 196 323 54 11 chr10 10017430 10017523 -135571765 - L2 LINE L2 -1456 1858 1762 2157 88 7 27 chr10 10017880 10018176 -135571112 - AluSg SINE Alu -20 290 1 407 198 23 23 chr10 10019599 10019776 -135569512 + (CATATA)n Simple_repeat Simple_repeat 4 180 0 280 254 8 8 chr10 10019788 10019918 -135569370 + (CATATA)n Simple_repeat Simple_repeat 6 135 0 21 36 0 0 chr10 10020879 10020907 -135568381 + AT_rich Low_complexity Low_complexity 1 28 0 2034 168 65 23 chr10 10021008 10021126 -135568162 - Tigger2 DNA MER2_type 0 2718 2606 2245 100 0 7 chr10 10021126 10021427 -135567861 - AluSx SINE Alu -13 299 1 2034 168 65 23 chr10 10021427 10021742 -135567546 - Tigger2 DNA MER2_type -112 2606 2267 494 118 0 0 chr10 10021726 10021794 -135567494 - Tigger2 DNA MER2_type -2649 69 2 * 2126 125 0 3 chr10 10021902 10022215 -135567073 - AluSx SINE Alu 0 312 1 250 384 58 15 chr10 10022217 10022486 -135566802 - L2 LINE L2 -240 3032 2751 4221 226 46 12 chr10 10022670 10023833 -135565455 - L1 LINE L1 -2626 3520 2318 217 182 15 15 chr10 10023938 10024004 -135565284 + (TA)n Simple_repeat Simple_repeat 2 67 0 2441 264 97 47 chr10 10024036 10024254 -135565034 + L1ME LINE L1 3520 3726 -2489 1761 155 28 3 chr10 10024254 10024544 -135564744 + AluSx SINE Alu 5 301 -11 2441 264 97 47 chr10 10024544 10024609 -135564679 + L1ME LINE L1 3726 3786 -2429 327 25 0 0 chr10 10024609 10024649 -135564639 + (CA)n Simple_repeat Simple_repeat 2 41 0 2441 264 97 47 chr10 10024649 10025729 -135563559 + L1ME LINE L1 3786 4952 -1263 437 274 57 0 chr10 10025728 10025852 -135563436 + L1ME LINE L1 5698 5828 -405 * 433 294 119 59 chr10 10025880 10026268 -135563020 + LTR16A LTR ERVL 16 426 -24 240 315 11 56 chr10 10026480 10026569 -135562719 + L2 LINE L2 3187 3271 -1 812 280 42 17 chr10 10027266 10027502 -135561786 - MIR SINE MIR -10 252 11 1628 259 92 47 chr10 10027818 10029935 -135559353 - L1MD3 LINE L1 -14 7981 5693 207 269 19 0 chr10 10031059 10031111 -135558177 + MIR SINE MIR 160 212 -50 816 226 111 17 chr10 10031742 10031976 -135557312 - MLT2B2 LTR ERVL 0 515 260 688 173 0 8 chr10 10031986 10032119 -135557169 - L1PA15-16 LINE L1 -3895 2954 2823 630 112 9 9 chr10 10032121 10032228 -135557060 + L1PA15 LINE L1 6056 6162 -3 588 271 39 55 chr10 10032228 10032483 -135556805 - MLT2B2 LTR ERVL -264 251 1 2036 161 55 3 chr10 10032558 10032938 -135556350 - MER57A LTR ERV1 0 403 4 284 361 103 30 chr10 10033020 10033494 -135555794 + L2 LINE L2 2804 3312 -1 1544 231 115 0 chr10 10034439 10034838 -135554450 - MLT2B1 LTR ERVL -75 445 1 542 313 19 30 chr10 10035433 10035701 -135553587 + LTR16A LTR ERVL 88 352 -98 237 316 26 26 chr10 10035908 10036025 -135553263 - MIR3 SINE MIR -53 155 39 299 320 10 19 chr10 10036139 10036242 -135553046 + MER5A DNA MER1_type 64 165 -24 1305 188 65 60 chr10 10036291 10036674 -135552614 - MLT1B LTR MaLR -1 389 5 25 0 0 0 chr10 10037075 10037100 -135552188 + AT_rich Low_complexity Low_complexity 1 25 0 1988 147 10 0 chr10 10039668 10039961 -135549327 - AluSx SINE Alu -15 297 2 284 388 71 41 chr10 10040472 10040910 -135548378 - L2 LINE L2 -15 3257 2807 361 231 29 10 chr10 10041464 10041568 -135547720 + L1M4 LINE L1 5698 5803 -375 750 222 23 56 chr10 10041909 10042212 -135547076 - L1MEc LINE L1 -3871 3694 3398 733 274 4 34 chr10 10042219 10042453 -135546835 - L1MEc LINE L1 -6153 1593 1367 261 0 0 0 chr10 10045246 10045275 -135544013 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 225 171 0 0 chr10 10046089 10046124 -135543164 - U2 snRNA snRNA -152 36 2 910 263 55 24 chr10 10047412 10047701 -135541587 - LTR16C LTR ERVL -8 483 186 263 250 0 0 chr10 10047913 10047969 -135541319 - MER2 DNA MER2_type 0 345 290 948 226 25 0 chr10 10048034 10048233 -135541055 - MER2 DNA MER2_type -140 205 2 261 337 94 54 chr10 10048841 10049322 -135539966 - ERVL LTR ERVL -1149 4615 4116 402 319 104 34 chr10 10049433 10049787 -135539501 - ERVL LTR ERVL -2125 3529 3151 472 329 67 69 chr10 10049875 10050337 -135538951 - ERVL LTR ERVL -1994 3002 2542 794 304 40 33 chr10 10050444 10050872 -135538416 - L1MC/D LINE L1 -2115 5693 5263 25 31 0 0 chr10 10050932 10050964 -135538324 + AT_rich Low_complexity Low_complexity 1 32 0 26 30 0 0 chr10 10051167 10051200 -135538088 + AT_rich Low_complexity Low_complexity 1 33 0 1548 189 25 0 chr10 10051289 10051564 -135537724 - AluJo SINE Alu -30 282 1 799 171 21 47 chr10 10051695 10051888 -135537400 - L1MB1 LINE L1 -226 5963 5776 1338 173 26 61 chr10 10051938 10052251 -135537037 + L1M3 LINE L1 5489 5790 -544 483 322 24 10 chr10 10052283 10052491 -135536797 + MER58C DNA MER1_type 5 215 0 775 291 25 30 chr10 10053008 10053483 -135535805 - MLT2F LTR ERVL -158 505 5 1371 311 23 33 chr10 10053808 10053989 -135535299 - ERVL LTR ERVL -348 5416 5235 2324 102 0 0 chr10 10053989 10054283 -135535005 + AluSg SINE Alu 1 294 -16 1371 311 23 33 chr10 10054283 10055000 -135534288 - ERVL LTR ERVL -529 5235 4456 203 0 0 36 chr10 10055638 10055666 -135533622 + (CA)n Simple_repeat Simple_repeat 2 28 0 186 133 0 0 chr10 10055770 10055800 -135533488 + (CATA)n Simple_repeat Simple_repeat 4 33 0 285 146 0 0 chr10 10055813 10055861 -135533427 + (TG)n Simple_repeat Simple_repeat 1 48 0 5510 134 7 18 chr10 10056510 10058113 -135531175 - L1PA15 LINE L1 -2 6163 4557 4557 224 13 5 chr10 10058125 10059176 -135530112 - L1PA15 LINE L1 -1944 4202 3143 3411 168 57 5 chr10 10059194 10059771 -135529517 + L1PA13 LINE L1 1 607 -6180 1718 175 55 37 chr10 10059771 10060096 -135529192 - MER1B DNA MER1_type -7 332 2 5990 225 62 2 chr10 10060097 10061321 -135527967 + L1PA13 LINE L1 608 1904 -4883 22 56 0 0 chr10 10062501 10062537 -135526751 + AT_rich Low_complexity Low_complexity 1 36 0 612 258 162 34 chr10 10062571 10062927 -135526361 + MLT1I LTR MaLR 1 450 0 2253 83 6 43 chr10 10063013 10063338 -135525950 - AluSp SINE Alu 0 313 1 25 51 0 0 chr10 10063364 10063403 -135525885 + AT_rich Low_complexity Low_complexity 1 39 0 209 295 163 12 chr10 10063462 10063628 -135525660 - MIR SINE MIR -1 261 71 209 346 145 11 chr10 10063688 10063867 -135525421 - MIR SINE MIR -13 249 47 27 29 0 0 chr10 10064380 10064414 -135524874 + AT_rich Low_complexity Low_complexity 1 34 0 3034 147 25 55 chr10 10065085 10065716 -135523572 - LTR9 LTR ERV1 0 612 1 3446 150 12 5 chr10 10065860 10066421 -135522867 + MER61E LTR ERV1 1 565 -4 802 295 62 37 chr10 10066670 10067104 -135522184 + L1MCc LINE L1 24 468 -5955 1417 279 89 33 chr10 10067410 10067571 -135521717 + L1MCc LINE L1 1945 2095 -5027 234 0 0 0 chr10 10067571 10067597 -135521691 + (CA)n Simple_repeat Simple_repeat 2 27 0 1417 279 89 33 chr10 10067597 10068028 -135521260 + L1MCc LINE L1 2095 2596 -4526 2130 119 3 3 chr10 10068028 10068321 -135520967 + AluSx SINE Alu 1 293 -19 1417 279 89 33 chr10 10068321 10068525 -135520763 + L1MCc LINE L1 2596 2787 -4335 340 261 18 73 chr10 10068522 10068687 -135520601 + L1ME1 LINE L1 6006 6161 -5 * 26 50 0 0 chr10 10069034 10069074 -135520214 + AT_rich Low_complexity Low_complexity 1 40 0 330 279 0 0 chr10 10069660 10069739 -135519549 + L2 LINE L2 3181 3259 -13 506 328 49 11 chr10 10070079 10070262 -135519026 + MIR SINE MIR 29 218 -44 2225 98 3 25 chr10 10070760 10071078 -135518210 - AluSp SINE Alu -2 311 1 345 262 128 43 chr10 10071516 10071680 -135517608 + MER3 DNA MER1_type 6 183 -26 7783 21 0 0 chr10 10071803 10072890 -135516398 + L1PA3 LINE L1 5066 6152 -3 240 331 37 37 chr10 10072980 10073143 -135516145 - L2 LINE L2 -2 3311 3149 2175 125 0 3 chr10 10073520 10073825 -135515463 + AluSx SINE Alu 1 304 -8 462 268 40 11 chr10 10073925 10074165 -135515123 - L1MB7 LINE L1 -11 6169 5915 25 31 0 0 chr10 10075460 10075492 -135513796 + AT_rich Low_complexity Low_complexity 1 32 0 1595 199 13 3 chr10 10075640 10075941 -135513347 + AluJo SINE Alu 1 304 -8 25 31 0 0 chr10 10075990 10076022 -135513266 + AT_rich Low_complexity Low_complexity 1 32 0 1899 182 9 0 chr10 10076178 10076519 -135512769 - MER7A DNA MER2_type -1 345 4 519 326 94 38 chr10 10076577 10076970 -135512318 + L2 LINE L2 1752 2166 -1148 1638 199 38 20 chr10 10077053 10077395 -135511893 + MLT1C LTR MaLR 90 437 -30 9352 155 22 8 chr10 10077395 10078989 -135510299 + Tigger1 DNA MER2_type 3 1619 -799 5539 79 11 35 chr10 10078989 10079429 -135509859 + L1PB1 LINE L1 5362 5776 -375 198 103 0 0 chr10 10079429 10079458 -135509830 + (CATA)n Simple_repeat Simple_repeat 2 30 0 5539 79 11 35 chr10 10079458 10079826 -135509462 + L1PB1 LINE L1 5776 6151 0 22 56 0 0 chr10 10079836 10079872 -135509416 + AT_rich Low_complexity Low_complexity 1 36 0 895 168 6 0 chr10 10079872 10080039 -135509249 + Tigger1 DNA MER2_type 1621 1788 -630 6075 24 0 2 chr10 10080039 10080960 -135508328 - L1PA4 LINE L1 -181 5974 5055 1367 30 18 0 chr10 10080960 10081121 -135508167 + L1PA4 LINE L1 5982 6152 -3 210 71 0 0 chr10 10081151 10081179 -135508109 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 2731 79 3 0 chr10 10081179 10081547 -135507741 + L1PB1 LINE L1 5783 6151 0 3428 159 42 10 chr10 10081577 10082198 -135507090 + Tigger1 DNA MER2_type 1778 2418 0 568 315 117 48 chr10 10082245 10082780 -135506508 + L2 LINE L2 2227 2723 -590 607 200 124 81 chr10 10082780 10082990 -135506298 + MER20 DNA MER1_type 1 219 0 568 315 117 48 chr10 10082990 10083308 -135505980 + L2 LINE L2 2723 3155 -158 2249 124 37 93 chr10 10083308 10083543 -135505745 + Tigger2a DNA MER2_type 1 199 -2509 2176 125 0 0 chr10 10083543 10083855 -135505433 - AluSx SINE Alu 0 312 1 2249 124 37 93 chr10 10083855 10084079 -135505209 + Tigger2a DNA MER2_type 199 434 0 568 315 117 48 chr10 10084079 10084192 -135505096 + L2 LINE L2 3155 3259 -54 405 0 0 0 chr10 10084193 10084238 -135505050 + (CA)n Simple_repeat Simple_repeat 2 46 0 180 97 0 0 chr10 10084256 10084287 -135505001 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 2865 126 23 71 chr10 10084524 10085118 -135504170 + LTR10A LTR ERV1 1 612 -21 1060 342 105 14 chr10 10085123 10085816 -135503472 + L2 LINE L2 158 913 -2401 778 314 131 16 chr10 10085818 10086094 -135503194 + L2 LINE L2 2439 2770 -544 1454 209 59 14 chr10 10086094 10086452 -135502836 - MLT1A2 LTR MaLR 0 374 1 778 314 131 16 chr10 10086452 10086548 -135502740 + L2 LINE L2 2770 2854 -460 1277 216 49 93 chr10 10086588 10087273 -135502015 - LTR9 LTR ERV1 0 779 1 871 305 40 59 chr10 10087276 10087702 -135501586 + L2 LINE L2 2894 3311 -2 322 279 101 6 chr10 10088929 10089087 -135500201 - L1ME3A LINE L1 -208 5962 5790 388 301 13 13 chr10 10089110 10089243 -135500045 - MLT1H LTR MaLR -374 175 1 826 266 97 48 chr10 10089417 10089748 -135499540 - MLT1I LTR MaLR 0 409 63 397 320 132 50 chr10 10090825 10091228 -135498060 - MLT1H LTR MaLR -43 506 71 306 200 14 14 chr10 10091415 10091485 -135497803 + Tigger5 DNA MER2_type 2251 2320 -3 260 288 18 9 chr10 10091540 10091651 -135497637 - L1MEc LINE L1 -3820 2395 2284 466 304 53 23 chr10 10091774 10092037 -135497251 - L1MEc LINE L1 -4177 2219 1949 267 267 37 11 chr10 10092354 10092469 -135496819 - L1PA15-16 LINE L1 -966 1798 1424 241 226 0 0 chr10 10092514 10092567 -135496721 + CT-rich Low_complexity Low_complexity 3 55 0 247 310 66 45 chr10 10092619 10092861 -135496427 - L1MEc LINE L1 -4910 1295 1049 182 250 225 12 chr10 10093969 10094049 -135495239 + L2 LINE L2 3214 3310 -3 213 286 24 12 chr10 10094102 10094186 -135495102 - L3b LINE CR1 -92 1491 1407 390 252 52 37 chr10 10094838 10094973 -135494315 + L2 LINE L2 3159 3295 -18 21 0 0 0 chr10 10095069 10095090 -135494198 + AT_rich Low_complexity Low_complexity 1 21 0 5123 92 29 20 chr10 10095388 10096175 -135493113 - SVA Other Other 0 1386 593 861 283 39 25 chr10 10096380 10096690 -135492598 + Zaphod DNA AcHobo 1 362 -3669 2132 100 37 7 chr10 10096690 10096990 -135492298 + AluSx SINE Alu 2 310 -2 861 283 39 25 chr10 10096990 10097007 -135492281 + Zaphod DNA AcHobo 362 377 -3654 712 278 33 41 chr10 10097244 10097489 -135491799 + Zaphod DNA AcHobo 362 604 -3427 1282 226 79 40 chr10 10097612 10097888 -135491400 + Zaphod DNA AcHobo 3341 3605 -426 180 0 0 0 chr10 10097888 10097908 -135491380 + (TA)n Simple_repeat Simple_repeat 2 21 0 1780 137 34 17 chr10 10097908 10098200 -135491088 - AluSx SINE Alu -15 297 1 1282 226 79 40 chr10 10098200 10098529 -135490759 + Zaphod DNA AcHobo 3604 3971 -60 830 205 51 44 chr10 10098612 10098631 -135490657 - MLT2B1 LTR ERVL -40 480 463 261 0 0 0 chr10 10098631 10098660 -135490628 + (TG)n Simple_repeat Simple_repeat 2 30 0 830 205 51 44 chr10 10098660 10098867 -135490421 - MLT2B1 LTR ERVL -57 463 196 224 336 18 27 chr10 10099064 10099174 -135490114 - MER5B DNA MER1_type -20 158 50 248 299 15 0 chr10 10100032 10100099 -135489189 - L3 LINE CR1 -2 1575 1508 307 326 181 5 chr10 10100543 10100758 -135488530 - L3 LINE CR1 -81 1496 1244 225 65 0 0 chr10 10100781 10100812 -135488476 + (TG)n Simple_repeat Simple_repeat 2 32 0 602 190 6 134 chr10 10101241 10101420 -135487868 - L2 LINE L2 0 3313 3158 496 255 108 0 chr10 10101434 10101591 -135487697 - MER104 DNA MER2_type -4 176 3 217 335 76 40 chr10 10101813 10102037 -135487251 + L2 LINE L2 2498 2729 -585 302 300 55 36 chr10 10102481 10102591 -135486697 + MIR SINE MIR 32 143 -119 28 29 0 0 chr10 10102858 10102893 -135486395 + AT_rich Low_complexity Low_complexity 1 35 0 31 44 0 0 chr10 10103045 10103090 -135486198 + AT_rich Low_complexity Low_complexity 1 45 0 21 57 0 0 chr10 10103097 10103132 -135486156 + AT_rich Low_complexity Low_complexity 1 35 0 1720 178 7 0 chr10 10103705 10103992 -135485296 + AluSx SINE Alu 1 289 -23 1629 156 99 52 chr10 10104032 10104397 -135484891 + MLT1B LTR MaLR 1 382 -8 243 289 28 90 chr10 10104414 10104625 -135484663 - MLT1J LTR MaLR -75 436 239 188 268 197 14 chr10 10104874 10104945 -135484343 - L3 LINE CR1 -944 633 550 225 94 0 0 chr10 10105589 10105621 -135483667 + (TC)n Simple_repeat Simple_repeat 1 32 0 1493 214 20 3 chr10 10106165 10106464 -135482824 - MER2 DNA MER2_type 0 345 42 310 160 0 0 chr10 10106469 10106519 -135482769 - Tigger2a DNA MER2_type -384 50 1 405 325 87 28 chr10 10106785 10107235 -135482053 - L2 LINE L2 -193 3079 2554 3618 175 81 8 chr10 10107235 10108063 -135481225 - L1 LINE L1 -1238 4908 4021 279 347 49 62 chr10 10109767 10110136 -135479152 - L2 LINE L2 -452 2862 2499 416 310 116 31 chr10 10110644 10111066 -135478222 + L1M4 LINE L1 2947 3404 -2742 33 43 0 0 chr10 10111318 10111365 -135477923 + AT_rich Low_complexity Low_complexity 1 47 0 22 35 0 0 chr10 10111473 10111502 -135477786 + AT_rich Low_complexity Low_complexity 1 29 0 321 333 81 0 chr10 10112272 10112395 -135476893 + L1M4 LINE L1 3711 3843 -2303 314 304 55 40 chr10 10112399 10112600 -135476688 - LTR67 LTR ERVL -18 539 336 438 309 100 26 chr10 10113268 10113769 -135475519 + L1MEc LINE L1 1247 1784 -4612 1024 301 90 22 chr10 10113966 10115409 -135473879 + L1MEc LINE L1 2023 3529 -2686 949 238 60 75 chr10 10115474 10115927 -135473361 - MLT2B3 LTR ERVL -1 553 108 226 204 93 0 chr10 10115907 10115961 -135473327 - MLT2B2 LTR ERVL -334 181 123 * 372 220 40 10 chr10 10115966 10116066 -135473222 - MLT2B3 LTR ERVL -377 177 75 346 243 0 0 chr10 10116136 10116210 -135473078 - MLT2B3 LTR ERVL -479 75 2 323 279 119 27 chr10 10116232 10116526 -135472762 + L1MEc LINE L1 3740 4060 -2155 639 286 154 39 chr10 10116726 10117552 -135471736 + L1MEc LINE L1 4349 5278 -937 2209 78 0 0 chr10 10117552 10117866 -135471422 + AluSx SINE Alu 1 314 0 639 286 154 39 chr10 10117866 10117887 -135471401 + L1MEc LINE L1 5278 5295 -920 2069 159 30 5 chr10 10117888 10118259 -135471029 - MER6 DNA MER2_type -1 864 225 1190 237 116 75 chr10 10118265 10118961 -135470327 + MER50 LTR ERV1 10 734 0 987 178 115 5 chr10 10118961 10119166 -135470122 - MER6 DNA MER2_type -637 228 1 324 64 0 0 chr10 10119276 10119323 -135469965 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 1569 251 52 24 chr10 10119795 10120257 -135469031 + MER74B LTR ERVL 71 545 -77 276 91 76 45 chr10 10120203 10120269 -135469019 - MER88 LTR ERVL -317 147 80 * 872 42 0 50 chr10 10120384 10120504 -135468784 - AluSg/x SINE Alu -19 291 178 883 142 0 22 chr10 10120587 10120770 -135468518 + (TCTA)n Simple_repeat Simple_repeat 2 180 0 720 176 6 22 chr10 10120795 10120977 -135468311 + (TCTA)n Simple_repeat Simple_repeat 2 180 0 602 216 6 0 chr10 10121002 10121178 -135468110 + (TCTG)n Simple_repeat Simple_repeat 4 180 0 734 185 12 8 chr10 10121196 10121457 -135467831 + (TCTA)n Simple_repeat Simple_repeat 1 262 0 272 277 4 2 chr10 10121512 10121615 -135467673 + L1MC/D LINE L1 4735 4838 -1308 30 89 0 0 chr10 10121739 10121818 -135467470 + AT_rich Low_complexity Low_complexity 1 79 0 360 292 167 5 chr10 10121942 10122158 -135467130 + L1MC/D LINE L1 5291 5534 -587 379 320 64 21 chr10 10122159 10122393 -135466895 + L1MC/D LINE L1 5573 5816 -1992 230 0 33 0 chr10 10122700 10122730 -135466558 + (TC)n Simple_repeat Simple_repeat 1 31 0 314 307 55 0 chr10 10123278 10123441 -135465847 + L1M4 LINE L1 4104 4275 -1871 180 111 0 0 chr10 10123475 10123502 -135465786 + (CA)n Simple_repeat Simple_repeat 2 28 0 347 327 18 5 chr10 10124256 10124476 -135464812 - L1M4 LINE L1 -2832 3314 3092 352 319 129 8 chr10 10124556 10124819 -135464469 - L1M4 LINE L1 -3166 2980 2686 13162 149 52 21 chr10 10124821 10126776 -135462512 - Tigger1 DNA MER2_type 0 2418 379 1190 83 12 6 chr10 10126776 10126945 -135462343 - L1PA7 LINE L1 -2 6152 5983 13162 149 52 21 chr10 10126945 10127333 -135461955 - Tigger1 DNA MER2_type -2039 379 4 248 274 48 48 chr10 10127393 10127561 -135461727 - L1M4 LINE L1 -3526 2620 2453 242 232 13 84 chr10 10127688 10127843 -135461445 + T-rich Low_complexity Low_complexity 3 146 0 28 29 0 0 chr10 10128367 10128402 -135460886 + AT_rich Low_complexity Low_complexity 1 35 0 409 293 121 25 chr10 10130069 10130267 -135459021 + MIR SINE MIR 30 246 -16 2168 139 0 0 chr10 10130388 10130698 -135458590 + AluSg SINE Alu 1 310 0 26 64 0 0 chr10 10130821 10130868 -135458420 + AT_rich Low_complexity Low_complexity 1 47 0 316 362 48 38 chr10 10130883 10131198 -135458090 - HAL1 LINE L1 -1076 1431 1114 375 338 124 10 chr10 10131786 10132076 -135457212 + MLT1K LTR MaLR 81 403 -185 34 24 0 0 chr10 10132806 10132847 -135456441 + AT_rich Low_complexity Low_complexity 1 41 0 1529 195 13 68 chr10 10132885 10133269 -135456019 - MLT1A2 LTR MaLR -11 379 1 38 61 0 0 chr10 10134569 10134635 -135454653 + AT_rich Low_complexity Low_complexity 1 66 0 284 326 20 14 chr10 10135497 10135644 -135453644 + (TATATG)n Simple_repeat Simple_repeat 5 152 0 452 316 40 29 chr10 10135652 10135927 -135453361 - LTR16B LTR ERVL -2 462 185 1347 217 10 59 chr10 10136699 10136881 -135452407 + MLT1A2 LTR MaLR 1 155 -219 2296 93 3 0 chr10 10136881 10137181 -135452107 + AluSx SINE Alu 1 301 -11 1347 217 10 59 chr10 10137181 10137390 -135451898 + MLT1A2 LTR MaLR 155 373 -1 1886 136 60 27 chr10 10137636 10138004 -135451284 - MSTC LTR MaLR -48 380 1 25 75 0 0 chr10 10138456 10138509 -135450779 + AT_rich Low_complexity Low_complexity 1 53 0 2184 110 0 0 chr10 10138539 10138858 -135450430 - AluSc SINE Alu 0 319 1 279 79 0 0 chr10 10139348 10139386 -135449902 + (A)n Simple_repeat Simple_repeat 1 38 0 2163 114 0 3 chr10 10140244 10140542 -135448746 - AluSx SINE Alu -15 297 1 21 0 0 0 chr10 10143298 10143319 -135445969 + AT_rich Low_complexity Low_complexity 1 21 0 438 269 123 41 chr10 10143322 10143541 -135445747 - MIR SINE MIR -8 254 18 2031 137 0 16 chr10 10143804 10144119 -135445169 - AluSq SINE Alu -3 310 1 412 299 0 9 chr10 10145481 10145588 -135443700 + L2 LINE L2 3188 3293 -20 2119 137 10 0 chr10 10145598 10145905 -135443383 - AluSx SINE Alu -2 310 1 524 239 104 18 chr10 10147271 10147434 -135441854 + MER5B DNA MER1_type 2 178 0 2175 114 3 13 chr10 10148037 10148345 -135440943 - AluSx SINE Alu -7 305 1 305 253 22 11 chr10 10148480 10148571 -135440717 + MER94 DNA DNA 9 100 -34 2427 164 0 5 chr10 10148743 10149163 -135440125 - MSTA LTR MaLR -2 426 9 23 0 0 0 chr10 10150211 10150234 -135439054 + AT_rich Low_complexity Low_complexity 1 23 0 37 52 0 0 chr10 10150280 10150338 -135438950 + AT_rich Low_complexity Low_complexity 1 58 0 656 161 0 0 chr10 10150503 10150621 -135438667 + Ricksha DNA DNA 2 119 -1062 1177 126 10 10 chr10 10150633 10150831 -135438457 + Ricksha DNA DNA 240 437 -2809 1871 164 55 24 chr10 10150831 10151379 -135437909 - MLT2A2 LTR ERVL 0 554 1 12667 160 35 19 chr10 10151379 10151737 -135437551 + Ricksha DNA DNA 433 784 -2462 2073 186 45 102 chr10 10151737 10152281 -135437007 + LTR9 LTR ERV1 1 504 -108 2102 115 0 7 chr10 10152281 10152577 -135436711 - AluSg SINE Alu -16 294 1 2073 186 45 102 chr10 10152577 10152681 -135436607 + LTR9 LTR ERV1 504 612 0 12667 160 35 19 chr10 10152681 10153330 -135435958 + Ricksha DNA DNA 784 1421 -1825 1971 130 0 61 chr10 10153330 10153660 -135435628 + AluSx SINE Alu 3 312 0 12667 160 35 19 chr10 10153660 10155338 -135433950 + Ricksha DNA DNA 1421 3238 -8 547 330 98 55 chr10 10155380 10156286 -135433002 - L2 LINE L2 -444 2870 1926 394 282 96 6 chr10 10156449 10156605 -135432683 - L1MC/D LINE L1 -2027 5781 5612 2010 112 54 0 chr10 10156884 10157162 -135432126 + AluSq SINE Alu 1 293 -20 206 107 71 0 chr10 10157567 10157623 -135431665 + GA-rich Low_complexity Low_complexity 3 62 0 22 35 0 0 chr10 10157663 10157692 -135431596 + AT_rich Low_complexity Low_complexity 1 29 0 793 139 0 0 chr10 10158432 10158561 -135430727 - L1PB1 LINE L1 0 6151 6023 641 168 16 0 chr10 10158629 10158754 -135430534 - L1PB1 LINE L1 -2 6149 6023 278 271 24 12 chr10 10158791 10158876 -135430412 + MIR3 SINE MIR 116 201 -7 2351 116 58 0 chr10 10160289 10160633 -135428655 + THE1B LTR MaLR 1 364 0 291 309 9 74 chr10 10160779 10160996 -135428292 + L2 LINE L2 1910 2112 -1202 292 296 114 45 chr10 10161322 10161542 -135427746 + MIR SINE MIR 4 238 -24 222 364 48 43 chr10 10161572 10161924 -135427364 + L2 LINE L2 2575 2928 -386 446 286 11 14 chr10 10164743 10164880 -135424408 + MIR SINE MIR 37 172 -36 2111 136 37 8 chr10 10165138 10165492 -135423796 + THE1B LTR MaLR 1 364 0 1278 177 8 21 chr10 10165558 10165801 -135423487 - AluJo SINE Alu 0 312 73 205 332 33 75 chr10 10165914 10166155 -135423133 + L2 LINE L2 2507 2737 -577 585 52 0 0 chr10 10166549 10166626 -135422662 + (TGAA)n Simple_repeat Simple_repeat 1 77 0 1568 177 3 52 chr10 10168376 10168686 -135420602 + AluJo SINE Alu 3 297 -15 221 345 109 0 chr10 10170483 10170593 -135418695 + MIR SINE MIR 5 126 -136 1778 171 10 16 chr10 10170938 10171248 -135418040 + AluJo SINE Alu 1 308 -4 2880 6 0 0 chr10 10171320 10171631 -135417657 + AluYa5 SINE Alu 1 311 0 1560 226 32 27 chr10 10172340 10172778 -135416510 - LTR47B LTR ERVL -3 440 1 2383 95 0 0 chr10 10173747 10174053 -135415235 - AluSx SINE Alu -6 306 1 976 105 0 14 chr10 10174558 10174701 -135414587 - AluSg/x SINE Alu 0 310 170 2239 92 3 22 chr10 10174704 10175018 -135414270 - AluSx SINE Alu -4 308 1 293 303 25 17 chr10 10175432 10175551 -135413737 - L3b LINE CR1 -202 1381 1262 1583 185 7 26 chr10 10175631 10175933 -135413355 + AluJo SINE Alu 1 296 -16 2141 95 0 7 chr10 10175937 10176244 -135413044 + AluSg SINE Alu 1 305 0 266 267 22 11 chr10 10176385 10176475 -135412813 + Charlie7 DNA MER1_type 1 91 -2521 2151 112 7 0 chr10 10176486 10176782 -135412506 + AluY SINE Alu 1 298 -13 918 257 36 41 chr10 10176786 10177198 -135412090 - L1ME2 LINE L1 -2 6162 5753 362 287 29 22 chr10 10177208 10177344 -135411944 - L1MDa LINE L1 -4022 2518 2382 3356 237 45 46 chr10 10177346 10179188 -135410100 - L1MD2 LINE L1 -21 6732 4898 649 237 0 0 chr10 10179198 10179316 -135409972 - FLAM_C SINE Alu -25 118 1 312 180 27 54 chr10 10179316 10179427 -135409861 - L1MD2 LINE L1 -1640 4900 4793 * 875 201 53 26 chr10 10179412 10179751 -135409537 - L1MD2 LINE L1 -2919 3621 3274 239 215 0 15 chr10 10179735 10179800 -135409488 - L1ME2 LINE L1 -493 5749 5686 * 1637 210 89 29 chr10 10179850 10180435 -135408853 - L1MD2 LINE L1 -4902 1638 1019 428 50 0 17 chr10 10180437 10180497 -135408791 + (TTTC)n Simple_repeat Simple_repeat 4 62 0 245 245 20 119 chr10 10181018 10181169 -135408119 - L1MD2 LINE L1 -5589 951 816 303 285 41 16 chr10 10181349 10181472 -135407816 - L1MD2 LINE L1 -6357 183 58 487 256 6 18 chr10 10181542 10181706 -135407582 - L1MEc LINE L1 -4314 2082 1921 892 176 29 33 chr10 10181892 10182102 -135407186 - MLT2B1 LTR ERVL -11 509 301 2219 87 47 3 chr10 10182789 10183089 -135406199 + AluSp SINE Alu 1 313 0 651 264 57 60 chr10 10183113 10183431 -135405857 - LTR16A1 LTR ERVL 0 457 141 220 158 70 0 chr10 10183844 10183901 -135405387 + (TA)n Simple_repeat Simple_repeat 2 62 0 993 162 0 0 chr10 10183926 10184085 -135405203 - FRAM SINE Alu -30 146 1 24 32 0 0 chr10 10184978 10185009 -135404279 + AT_rich Low_complexity Low_complexity 1 31 0 268 197 79 0 chr10 10185267 10185343 -135403945 + MIR SINE MIR 105 186 -76 207 100 0 0 chr10 10185922 10185952 -135403336 + (TCC)n Simple_repeat Simple_repeat 3 32 0 251 275 29 0 chr10 10186207 10186276 -135403012 - MIR SINE MIR -108 154 84 452 282 14 112 chr10 10187027 10187375 -135401913 + MER90 LTR ERV1 294 607 -7 200 35 35 0 chr10 10187498 10187527 -135401761 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 2284 57 0 7 chr10 10187530 10187812 -135401476 - AluY SINE Alu -31 280 1 201 39 0 0 chr10 10188154 10188180 -135401108 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 2064 145 0 10 chr10 10189437 10189741 -135399547 - AluSx SINE Alu -9 303 3 770 257 53 56 chr10 10189742 10190194 -135399094 - HsTC2 DNA Tc2 -14 1884 1247 4828 82 5 0 chr10 10190844 10191487 -135397801 - L1PA10 LINE L1 -4 6164 5519 751 257 32 11 chr10 10193584 10193771 -135395517 + MER20 DNA MER1_type 17 207 -12 672 284 47 5 chr10 10194752 10194967 -135394321 - MER58A DNA MER1_type 0 224 1 24 32 0 0 chr10 10195549 10195580 -135393708 + AT_rich Low_complexity Low_complexity 1 31 0 2100 115 3 10 chr10 10196173 10196477 -135392811 + AluSq SINE Alu 1 302 -11 228 259 0 0 chr10 10196505 10196559 -135392729 + (TAGA)n Simple_repeat Simple_repeat 4 57 0 2822 25 0 0 chr10 10196934 10197249 -135392039 - AluYb8 SINE Alu -3 315 1 189 74 0 0 chr10 10198181 10198208 -135391080 + (T)n Simple_repeat Simple_repeat 1 27 0 22 0 0 0 chr10 10198220 10198242 -135391046 + AT_rich Low_complexity Low_complexity 1 22 0 40575 37 2 7 chr10 10198333 10204129 -135385159 + L1PA3 LINE L1 390 6155 0 29 28 0 0 chr10 10204129 10204165 -135385123 + AT_rich Low_complexity Low_complexity 1 36 0 741 268 91 50 chr10 10204207 10204603 -135384685 - MLT1G1 LTR MaLR -183 412 1 23 33 0 0 chr10 10205771 10205801 -135383487 + AT_rich Low_complexity Low_complexity 1 30 0 413 286 166 45 chr10 10206026 10206331 -135382957 - L1ME3 LINE L1 -211 5951 5684 2552 47 3 0 chr10 10206331 10206630 -135382658 + AluY SINE Alu 1 300 -11 413 286 166 45 chr10 10206630 10206943 -135382345 - L1ME3 LINE L1 -478 5684 5258 745 290 86 17 chr10 10207020 10207541 -135381747 - L1ME3 LINE L1 -1091 5055 4499 1990 181 22 54 chr10 10207758 10207828 -135381460 - Tigger2a DNA MER2_type -2274 434 363 2205 113 7 0 chr10 10207828 10208129 -135381159 - AluSx SINE Alu -9 303 1 1990 181 22 54 chr10 10208129 10208506 -135380782 - Tigger2a DNA MER2_type -2345 363 1 370 292 36 70 chr10 10208531 10208915 -135380373 - L1ME3 LINE L1 -1984 4162 3792 28 0 0 0 chr10 10210297 10210325 -135378963 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr10 10210644 10210665 -135378623 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 10210709 10210730 -135378558 + AT_rich Low_complexity Low_complexity 1 21 0 2299 93 3 0 chr10 10211108 10211410 -135377878 - AluSx SINE Alu -9 303 1 27 0 0 0 chr10 10211544 10211571 -135377717 + AT_rich Low_complexity Low_complexity 1 27 0 2125 135 3 0 chr10 10211601 10211913 -135377375 - AluSq SINE Alu 0 313 1 23 33 0 0 chr10 10211942 10211972 -135377316 + AT_rich Low_complexity Low_complexity 1 30 0 231 265 52 44 chr10 10212131 10212267 -135377021 + L1M4 LINE L1 4802 4938 -1208 2295 275 62 10 chr10 10212425 10213407 -135375881 + L1MC2 LINE L1 344 1375 -4849 4067 179 35 15 chr10 10213415 10214676 -135374612 + L1PB4 LINE L1 4843 6129 -27 * 11212 207 32 13 chr10 10214665 10218460 -135370828 + L1PA16 LINE L1 2300 6166 0 1424 236 63 9 chr10 10218453 10218894 -135370394 + L1MC2 LINE L1 4299 4763 -1801 * 1927 224 23 121 chr10 10218894 10219558 -135369730 + MER77 LTR ERV1 3 601 -4 2470 229 45 60 chr10 10219562 10219595 -135369693 + L1MC2 LINE L1 4757 4789 -1973 2296 87 10 0 chr10 10219595 10219884 -135369404 + AluSc SINE Alu 1 292 -17 2470 229 45 60 chr10 10219884 10221462 -135367826 + L1MC2 LINE L1 4789 6356 -406 376 197 88 80 chr10 10223459 10223596 -135365692 - L2 LINE L2 -1 3312 3175 2762 145 19 11 chr10 10223626 10224103 -135365185 - L1PA15 LINE L1 -17 6148 5668 461 313 18 0 chr10 10224160 10224326 -135364962 - L1M4 LINE L1 -1050 5096 4928 2173 112 42 31 chr10 10224377 10224735 -135364553 + THE1B LTR MaLR 3 364 0 287 266 93 85 chr10 10224898 10225394 -135363894 - L1M4 LINE L1 -1541 4605 4106 1675 194 71 8 chr10 10225456 10225821 -135363467 - MLT1B LTR MaLR -2 388 1 462 233 167 11 chr10 10225850 10226120 -135363168 - L1MDa LINE L1 -3663 2877 2566 326 206 137 55 chr10 10226139 10226285 -135363003 - L1MDa LINE L1 -3966 2574 2417 2447 48 3 45 chr10 10226661 10226975 -135362313 - AluY SINE Alu -8 303 3 667 297 21 5 chr10 10226977 10227169 -135362119 - L2 LINE L2 -599 2715 2521 1647 251 87 50 chr10 10227177 10227754 -135361534 - MER77 LTR ERV1 -7 598 1 734 346 85 0 chr10 10227782 10228123 -135361165 - L2 LINE L2 -868 2446 2077 2087 110 7 7 chr10 10228594 10228886 -135360402 + AluSp SINE Alu 4 295 -18 427 281 85 26 chr10 10228922 10229192 -135360096 - L1ME2 LINE L1 -213 5951 5666 281 277 24 0 chr10 10229557 10229640 -135359648 + L1MC4a LINE L1 5603 5687 -2121 479 235 132 52 chr10 10229670 10230057 -135359231 + L1MC4a LINE L1 5757 6174 -1634 1225 290 89 29 chr10 10230186 10230913 -135358375 + L1MC4 LINE L1 7122 7892 -150 22 0 0 0 chr10 10231144 10231166 -135358122 + AT_rich Low_complexity Low_complexity 1 22 0 1304 299 72 52 chr10 10231310 10232278 -135357010 + L2 LINE L2 2328 3313 0 315 267 35 0 chr10 10232703 10232789 -135356499 - L2 LINE L2 -2 3270 3182 23 0 0 0 chr10 10233576 10233599 -135355689 + AT_rich Low_complexity Low_complexity 1 23 0 2424 87 0 7 chr10 10235083 10235392 -135353896 - AluSg SINE Alu -3 307 1 2078 114 9 16 chr10 10235741 10236056 -135353232 - AluSq SINE Alu 0 313 1 221 229 108 24 chr10 10236174 10236257 -135353031 - L2 LINE L2 0 3272 3183 * 335 238 17 171 chr10 10236248 10236429 -135352859 + MIR SINE MIR 36 188 -74 451 259 23 27 chr10 10236509 10236633 -135352655 - MER5B DNA MER1_type 0 189 40 26 82 0 0 chr10 10236633 10236694 -135352594 + AT_rich Low_complexity Low_complexity 1 61 0 1982 132 3 16 chr10 10236716 10237019 -135352269 + AluSx SINE Alu 1 299 -13 2478 73 0 0 chr10 10237120 10237420 -135351868 - AluY SINE Alu -11 300 1 41 72 0 0 chr10 10237510 10237593 -135351695 + AT_rich Low_complexity Low_complexity 1 83 0 220 299 90 0 chr10 10237626 10237693 -135351595 - L2 LINE L2 -44 3269 3197 186 43 0 0 chr10 10237793 10237816 -135351472 + (TGAA)n Simple_repeat Simple_repeat 3 25 0 401 265 78 54 chr10 10238244 10238410 -135350878 + MLT1L LTR MaLR 252 421 -194 1743 152 61 25 chr10 10238794 10239156 -135350132 + THE1C LTR MaLR 1 375 0 22 56 0 0 chr10 10239609 10239645 -135349643 + AT_rich Low_complexity Low_complexity 1 36 0 266 306 49 9 chr10 10240430 10240552 -135348736 - MIR SINE MIR -81 127 4 562 241 216 10 chr10 10240591 10240790 -135348498 - MIR SINE MIR -16 246 7 288 308 39 0 chr10 10240889 10240967 -135348321 + L2 LINE L2 3195 3275 -38 1053 211 75 0 chr10 10240981 10241090 -135348198 - L1MA9 LINE L1 -39 6273 6174 186 43 0 0 chr10 10241090 10241113 -135348175 + (TG)n Simple_repeat Simple_repeat 1 23 0 1053 211 75 0 chr10 10241113 10241269 -135348019 - L1MA9 LINE L1 -138 6174 5988 232 211 35 18 chr10 10241667 10241724 -135347564 + MIR SINE MIR 83 140 -68 301 273 73 9 chr10 10242187 10242297 -135346991 - MER106B DNA MER1_type 0 1059 943 1113 255 96 32 chr10 10242297 10242736 -135346552 - MLT1C LTR MaLR 0 467 1 1925 135 0 122 chr10 10242756 10243140 -135346148 + MER1B DNA MER1_type 1 337 0 351 44 0 0 chr10 10243143 10243188 -135346100 + (TG)n Simple_repeat Simple_repeat 2 46 0 856 274 18 14 chr10 10243311 10243534 -135345754 + MER58A DNA MER1_type 1 224 0 22 0 0 0 chr10 10243967 10243989 -135345299 + AT_rich Low_complexity Low_complexity 1 22 0 3874 177 99 10 chr10 10244119 10244908 -135344380 - MER21B LTR ERV1 -4 859 1 309 267 50 50 chr10 10244968 10245088 -135344200 - MIR SINE MIR -113 149 30 811 176 8 0 chr10 10245723 10245854 -135343434 - FLAM_C SINE Alu -11 132 1 203 169 51 0 chr10 10245877 10245936 -135343352 + (TA)n Simple_repeat Simple_repeat 2 63 0 208 130 87 0 chr10 10245969 10246061 -135343227 + (TA)n Simple_repeat Simple_repeat 1 100 0 1731 189 70 44 chr10 10246073 10246527 -135342761 + MLT1D LTR MaLR 40 505 0 2196 115 3 3 chr10 10247233 10247529 -135341759 - AluSx SINE Alu -16 296 1 996 221 4 35 chr10 10248020 10248246 -135341042 - MER20 DNA MER1_type 0 219 1 286 314 102 70 chr10 10249590 10250338 -135338950 + HAL1 LINE L1 57 828 -1679 1929 264 63 22 chr10 10250527 10251110 -135338178 + L1MDa LINE L1 1 607 -5933 512 251 24 19 chr10 10251139 10251346 -135337942 + L1MDa LINE L1 1078 1285 -5255 844 238 45 77 chr10 10251397 10251776 -135337512 + L1MDa LINE L1 2942 3308 -3232 504 262 0 24 chr10 10251770 10251896 -135337392 + L1MD2 LINE L1 6031 6153 -206 * 372 290 28 0 chr10 10251884 10252029 -135337259 + L1MD3 LINE L1 7832 7980 -15 * 282 320 59 10 chr10 10252068 10252271 -135337017 + HAL1 LINE L1 1107 1319 -1188 21 0 0 0 chr10 10252321 10252342 -135336946 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 10253004 10253025 -135336263 + AT_rich Low_complexity Low_complexity 1 21 0 403 317 24 77 chr10 10253796 10254004 -135335284 + MLT1J2 LTR MaLR 2 198 -248 1419 190 20 14 chr10 10254249 10254297 -135334991 + L1MB2 LINE L1 5452 5498 -686 6357 152 50 7 chr10 10254297 10255476 -135333812 + Tigger3b DNA MER2_type 2 1231 0 1419 190 20 14 chr10 10255476 10255722 -135333566 + L1MB2 LINE L1 5498 5748 -436 406 214 22 0 chr10 10255763 10255852 -135333436 - L1MB1 LINE L1 -274 5894 5804 731 277 39 28 chr10 10255854 10255898 -135333390 - L1M4 LINE L1 -1832 4314 4272 484 56 127 0 chr10 10255898 10255969 -135333319 + MADE1 DNA Mariner 1 80 0 731 277 39 28 chr10 10255969 10256209 -135333079 - L1M4 LINE L1 -1874 4272 4027 6905 109 12 6 chr10 10256242 10257376 -135331912 - L1MA3 LINE L1 -6 6299 5158 232 214 24 0 chr10 10257467 10257551 -135331737 - L1M4 LINE L1 -2196 3950 3865 248 88 263 0 chr10 10257598 10257655 -135331633 + L1PA14 LINE L1 6090 6161 0 823 214 22 2 chr10 10257740 10257930 -135331358 + L1MB2 LINE L1 5900 6092 -79 4882 134 24 22 chr10 10258120 10258954 -135330334 - L1PA15 LINE L1 -5 6160 5325 382 131 107 0 chr10 10258955 10259039 -135330249 + L1MB2 LINE L1 6077 6169 -2 528 186 0 0 chr10 10259105 10259207 -135330081 + L1MB8 LINE L1 6071 6172 -6 215 302 62 31 chr10 10259576 10259672 -135329616 + MIR SINE MIR 18 116 -92 219 170 0 0 chr10 10259702 10259749 -135329539 + (TA)n Simple_repeat Simple_repeat 2 48 0 1701 171 0 7 chr10 10261052 10261332 -135327956 + AluSx SINE Alu 23 300 -12 240 254 17 0 chr10 10261448 10261507 -135327781 + MLT1H1 LTR MaLR 30 89 -466 767 245 8 59 chr10 10261657 10261894 -135327394 + MLT1H1 LTR MaLR 329 553 -2 521 249 31 13 chr10 10262184 10262367 -135326921 + MLT1H LTR MaLR 372 549 0 24 0 0 0 chr10 10263345 10263369 -135325919 + AT_rich Low_complexity Low_complexity 1 24 0 1945 149 16 43 chr10 10264390 10264760 -135324528 + THE1B LTR MaLR 5 364 0 180 0 0 0 chr10 10264811 10264831 -135324457 + (CA)n Simple_repeat Simple_repeat 2 21 0 340 107 0 14 chr10 10265244 10265446 -135323842 + AluSx SINE Alu 26 291 -9 1907 134 31 0 chr10 10266985 10267276 -135322012 + AluSx SINE Alu 1 300 -12 188 310 35 0 chr10 10267548 10267606 -135321682 - L2 LINE L2 -4 3309 3250 25 31 0 0 chr10 10267640 10267672 -135321616 + AT_rich Low_complexity Low_complexity 1 32 0 355 294 44 15 chr10 10267867 10268003 -135321285 + MIR SINE MIR 53 192 -70 251 0 0 56 chr10 10268304 10268340 -135320948 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 490 304 124 55 chr10 10268403 10268926 -135320362 + L1MEd LINE L1 536 1094 -5025 1825 163 3 13 chr10 10268929 10269230 -135320058 + AluSx SINE Alu 1 298 -14 5335 129 12 37 chr10 10269908 10269985 -135319303 + L1PB3 LINE L1 5254 5331 -823 2202 109 3 10 chr10 10269985 10270297 -135318991 + AluSx SINE Alu 1 310 -2 5335 129 12 37 chr10 10270297 10271141 -135318147 + L1PB3 LINE L1 5331 6152 -2 307 299 0 10 chr10 10271691 10271827 -135317461 + L1ME LINE L1 5639 5773 -389 2145 143 0 0 chr10 10272007 10272314 -135316974 + AluSx SINE Alu 1 307 -5 24 53 0 0 chr10 10272473 10272511 -135316777 + AT_rich Low_complexity Low_complexity 1 38 0 512 168 0 19 chr10 10273768 10273875 -135315413 + (TATATG)n Simple_repeat Simple_repeat 6 110 0 237 152 0 0 chr10 10273881 10273927 -135315361 - LTR66 LTR ERVL -171 439 394 284 161 16 0 chr10 10273968 10274030 -135315258 + (TAGA)n Simple_repeat Simple_repeat 4 66 0 25 65 0 0 chr10 10274044 10274090 -135315198 + AT_rich Low_complexity Low_complexity 1 46 0 801 282 49 35 chr10 10274289 10274431 -135314857 + L1ME3A LINE L1 5717 5855 -315 372 167 0 71 chr10 10274431 10274515 -135314773 - MADE1 DNA Mariner 0 80 3 801 282 49 35 chr10 10274515 10274720 -135314568 + L1ME3A LINE L1 5855 6069 -101 269 248 20 10 chr10 10274743 10274844 -135314444 + (TA)n Simple_repeat Simple_repeat 1 102 0 2256 98 30 0 chr10 10274867 10275164 -135314124 - AluSq SINE Alu -7 306 1 356 194 14 0 chr10 10275166 10275238 -135314050 - MER5A DNA MER1_type -116 73 1 2663 86 22 3 chr10 10275258 10275629 -135313659 - MER41A LTR ERV1 0 554 177 1972 121 0 0 chr10 10275731 10276011 -135313277 + AluSc SINE Alu 23 302 -7 661 307 215 36 chr10 10276070 10276254 -135313034 - L2 LINE L2 -221 3051 2901 714 257 11 16 chr10 10276254 10276441 -135312847 - MER5A DNA MER1_type -3 186 1 661 307 215 36 chr10 10276441 10276507 -135312781 - L2 LINE L2 -371 2901 2848 1841 196 37 8 chr10 10276507 10276890 -135312398 + MSTD LTR MaLR 3 396 0 661 307 215 36 chr10 10276890 10277530 -135311758 - L2 LINE L2 -424 2848 2005 198 167 0 0 chr10 10277787 10277823 -135311465 + (CA)n Simple_repeat Simple_repeat 1 36 0 48 43 0 0 chr10 10278161 10278230 -135311058 + AT_rich Low_complexity Low_complexity 1 69 0 1191 111 23 0 chr10 10278233 10278393 -135310895 - AluSp SINE Alu -19 294 128 2396 80 0 3 chr10 10278393 10278705 -135310583 - AluY SINE Alu 0 311 1 333 291 41 64 chr10 10279933 10280105 -135309183 - L1 LINE L1 -860 5286 5119 1518 127 0 4 chr10 10281825 10282061 -135307227 - L1PB1 LINE L1 -1 6150 5916 902 136 39 7 chr10 10282062 10282118 -135307170 + L1PB1 LINE L1 5725 5778 -373 243 88 0 0 chr10 10282118 10282152 -135307136 + (TG)n Simple_repeat Simple_repeat 2 35 0 902 136 39 7 chr10 10282152 10282249 -135307039 + L1PB1 LINE L1 5778 5883 -268 3836 120 8 7 chr10 10282651 10283244 -135306044 + L1PA16 LINE L1 5571 6164 -2 2226 88 0 0 chr10 10284384 10284667 -135304621 - AluSx SINE Alu -19 293 11 1194 142 46 17 chr10 10284692 10284932 -135304356 - L1MA5A LINE L1 -6 6291 6045 364 133 67 78 chr10 10284969 10285059 -135304229 + MER103 DNA DNA 4 92 -74 270 193 0 0 chr10 10285686 10285743 -135303545 + (CA)n Simple_repeat Simple_repeat 2 58 0 243 114 0 0 chr10 10286108 10286152 -135303136 + (CTGTG)n Simple_repeat Simple_repeat 3 46 0 2181 111 3 23 chr10 10286913 10287220 -135302068 + AluSp SINE Alu 1 301 -12 3019 111 31 8 chr10 10287228 10287707 -135301581 - L1PA14 LINE L1 -2 6159 5670 1066 228 61 19 chr10 10289115 10289428 -135299860 + MLT1A2 LTR MaLR 6 424 -43 180 0 0 0 chr10 10289428 10289448 -135299840 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 1971 134 7 0 chr10 10289448 10289725 -135299563 - AluSq SINE Alu -26 287 9 871 295 126 28 chr10 10289794 10290224 -135299064 - L2 LINE L2 -18 3295 2824 185 203 119 51 chr10 10290300 10290359 -135298929 - L2 LINE L2 -1061 2253 2191 1604 161 9 77 chr10 10290744 10291068 -135298220 + AluJo SINE Alu 1 302 -10 902 175 19 19 chr10 10291673 10291833 -135297455 - FRAM SINE Alu -17 159 1 263 267 80 0 chr10 10292874 10292949 -135296339 + MIR3 SINE MIR 105 185 -23 1821 159 36 32 chr10 10293048 10293356 -135295932 + AluJo SINE Alu 1 309 -3 416 237 44 18 chr10 10293363 10293477 -135295811 + MER5A DNA MER1_type 73 189 0 253 330 53 48 chr10 10297557 10297784 -135291504 - MIR SINE MIR 0 262 35 1875 156 0 0 chr10 10298381 10298664 -135290624 - AluSx SINE Alu -27 285 3 321 354 84 14 chr10 10298757 10298972 -135290316 + L2 LINE L2 2480 2709 -605 180 0 0 0 chr10 10299373 10299393 -135289895 + (TAA)n Simple_repeat Simple_repeat 1 20 0 258 314 12 0 chr10 10300023 10300109 -135289179 + MARNA DNA Mariner 408 494 -92 22 35 0 0 chr10 10300755 10300784 -135288504 + AT_rich Low_complexity Low_complexity 1 29 0 5176 179 20 18 chr10 10300789 10302085 -135287203 + L1MC2 LINE L1 5040 6333 -11 727 270 87 36 chr10 10302696 10303029 -135286259 - MLT1J1 LTR MaLR -31 415 66 26 0 0 0 chr10 10303167 10303193 -135286095 + AT_rich Low_complexity Low_complexity 1 26 0 423 0 0 0 chr10 10304616 10304663 -135284625 + (CA)n Simple_repeat Simple_repeat 2 48 0 2341 95 0 13 chr10 10305205 10305511 -135283777 - AluSp SINE Alu -11 302 1 25 0 0 0 chr10 10305519 10305544 -135283744 + AT_rich Low_complexity Low_complexity 1 25 0 327 145 0 16 chr10 10305833 10305895 -135283393 - MER51A LTR ERV1 -279 355 295 193 362 14 0 chr10 10305989 10306058 -135283230 - L2 LINE L2 -560 2754 2685 2229 167 41 5 chr10 10306122 10306535 -135282753 - MSTA LTR MaLR 0 428 1 1507 172 61 8 chr10 10306922 10307081 -135282207 - AluJo SINE Alu -23 289 109 387 0 0 0 chr10 10307081 10307124 -135282164 + (TG)n Simple_repeat Simple_repeat 2 44 0 1507 172 61 8 chr10 10307124 10307225 -135282063 - AluJo SINE Alu -203 109 15 334 278 0 52 chr10 10307461 10307576 -135281712 + MER5A DNA MER1_type 4 112 -77 29 47 0 0 chr10 10307832 10307875 -135281413 + AT_rich Low_complexity Low_complexity 1 43 0 405 311 38 0 chr10 10307956 10308062 -135281226 - MER91C DNA MER1_type 0 140 31 503 191 37 37 chr10 10309869 10310005 -135279283 - L1MA5A LINE L1 -3 6294 6159 40909 43 11 2 chr10 10310301 10316385 -135272903 - L1PA4 LINE L1 -3 6152 12 811 165 0 15 chr10 10316447 10316580 -135272708 - FLAM_C SINE Alu -2 131 1 690 200 0 0 chr10 10317225 10317345 -135271943 + FLAM_C SINE Alu 1 120 -13 2595 91 16 11 chr10 10317650 10318023 -135271265 + THE1C LTR MaLR 1 375 0 360 0 0 0 chr10 10318055 10318095 -135271193 + (TA)n Simple_repeat Simple_repeat 1 40 0 26 74 0 0 chr10 10319027 10319081 -135270207 + AT_rich Low_complexity Low_complexity 1 54 0 387 284 59 75 chr10 10319746 10320052 -135269236 - L3 LINE CR1 -30 1547 1247 351 316 45 8 chr10 10320058 10320191 -135269097 + MIR SINE MIR 53 190 -72 221 367 99 29 chr10 10320384 10320622 -135268666 - L2 LINE L2 -178 3094 2816 186 103 0 0 chr10 10320622 10320651 -135268637 + (TAA)n Simple_repeat Simple_repeat 1 29 0 221 367 99 29 chr10 10320651 10320770 -135268518 - L2 LINE L2 -456 2816 2707 233 271 41 41 chr10 10320903 10321025 -135268263 - MER94 DNA DNA -8 126 5 255 31 0 0 chr10 10321321 10321353 -135267935 + (TG)n Simple_repeat Simple_repeat 2 33 0 2285 109 3 0 chr10 10321973 10322285 -135267003 - AluSp SINE Alu 0 313 1 238 328 43 43 chr10 10323460 10323576 -135265712 + L2 LINE L2 3138 3253 -19 2293 153 25 35 chr10 10323765 10323966 -135265322 + MSTA LTR MaLR 1 202 -226 2514 58 0 3 chr10 10323966 10324278 -135265010 + AluY SINE Alu 1 311 0 2293 153 25 35 chr10 10324278 10324508 -135264780 + MSTA LTR MaLR 202 428 0 207 100 0 0 chr10 10325269 10325299 -135263989 + (TTTC)n Simple_repeat Simple_repeat 3 32 0 37 39 0 0 chr10 10326005 10326056 -135263232 + AT_rich Low_complexity Low_complexity 1 51 0 2085 137 0 13 chr10 10326433 10326746 -135262542 - AluSc SINE Alu 0 309 1 2565 97 6 0 chr10 10326766 10327127 -135262161 - L1PB1 LINE L1 0 6151 5789 505 106 18 18 chr10 10327136 10327249 -135262039 + (TCTA)n Simple_repeat Simple_repeat 4 116 0 1955 79 0 0 chr10 10327252 10327519 -135261769 - L1PB1 LINE L1 -360 5791 5525 28 0 0 0 chr10 10327974 10328002 -135261286 + AT_rich Low_complexity Low_complexity 1 28 0 1850 153 3 3 chr10 10328089 10328396 -135260892 - L1MC1 LINE L1 -11 6322 6016 3525 152 0 0 chr10 10328404 10328931 -135260357 - MER1A DNA MER1_type 0 527 1 675 185 13 0 chr10 10328950 10329101 -135260187 - L1MC1 LINE L1 -394 5939 5787 * 1036 236 46 18 chr10 10329100 10329384 -135259904 + L1M3e LINE L1 1238 1529 -5501 516 181 0 0 chr10 10329390 10329473 -135259815 + AluSg/x SINE Alu 202 284 -25 1915 112 33 4 chr10 10329484 10329760 -135259528 + AluSg SINE Alu 1 284 -26 24 32 0 0 chr10 10329760 10329791 -135259497 + AT_rich Low_complexity Low_complexity 1 31 0 3142 198 32 0 chr10 10329892 10330580 -135258708 - L1MCa LINE L1 -5623 803 94 2569 102 0 0 chr10 10330561 10330587 -135258701 + L1PA10 LINE L1 5574 5599 -569 * 1294 77 11 27 chr10 10330587 10330770 -135258518 - L1PA10 LINE L1 -7 6161 5982 2569 102 0 0 chr10 10330770 10331117 -135258171 + L1PA10 LINE L1 5598 5947 -221 361 230 35 0 chr10 10331114 10331201 -135258087 - L1MCa LINE L1 -6317 109 20 * 217 214 84 92 chr10 10331708 10331839 -135257449 - L2 LINE L2 -3 3310 3181 198 0 0 0 chr10 10332664 10332686 -135256602 + (A)n Simple_repeat Simple_repeat 1 22 0 1800 128 20 99 chr10 10332769 10333114 -135256174 + AluYb8 SINE Alu 1 318 0 186 231 39 0 chr10 10333216 10333268 -135256020 + L2 LINE L2 2933 2986 -327 194 0 0 37 chr10 10333344 10333371 -135255917 + (CAA)n Simple_repeat Simple_repeat 2 27 0 579 321 44 14 chr10 10333533 10333829 -135255459 - LTR16C LTR ERVL -181 310 6 522 255 39 114 chr10 10334484 10334613 -135254675 + MIR SINE MIR 13 115 -147 2351 119 0 0 chr10 10334613 10334925 -135254363 + AluSx SINE Alu 1 312 0 522 255 39 114 chr10 10334925 10335050 -135254238 + MIR SINE MIR 115 248 -14 193 254 0 48 chr10 10336469 10336532 -135252756 - MIR SINE MIR -31 231 172 30 0 0 0 chr10 10336543 10336573 -135252715 + AT_rich Low_complexity Low_complexity 1 30 0 494 292 91 40 chr10 10336999 10337328 -135251960 + MLT1I LTR MaLR 61 406 -3 21 0 0 0 chr10 10338430 10338451 -135250837 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 10339342 10339363 -135249925 + AT_rich Low_complexity Low_complexity 1 21 0 666 246 78 0 chr10 10339368 10339652 -135249636 + L1M4 LINE L1 3139 3444 -2702 664 174 0 25 chr10 10339654 10339775 -135249513 + AluJb SINE Alu 81 198 -114 2831 255 64 35 chr10 10339785 10340859 -135248429 + L1M4 LINE L1 3468 4573 -1573 1648 235 143 75 chr10 10340845 10341731 -135247557 + L1MC3 LINE L1 4062 5008 -1138 * 1048 251 47 16 chr10 10341790 10342109 -135247179 - LTR52 LTR ERVL -92 329 1 4835 253 58 21 chr10 10342109 10343409 -135245879 - LTR52-int LTR ERVL 0 3556 2210 3544 239 65 19 chr10 10343475 10344727 -135244561 - LTR52-int LTR ERVL -1480 2098 794 198 0 0 0 chr10 10344783 10344805 -135244483 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 2205 216 82 51 chr10 10344808 10345396 -135243892 - LTR52-int LTR ERVL -2940 616 11 1678 204 30 33 chr10 10345418 10345814 -135243474 - LTR52 LTR ERVL -26 395 1 950 229 30 0 chr10 10345814 10346080 -135243208 + L1MC3 LINE L1 5005 5278 -868 1773 214 5 5 chr10 10346109 10346488 -135242800 + L1MC3 LINE L1 5545 5923 -1862 1042 227 57 57 chr10 10346488 10346823 -135242465 + MER2 DNA MER2_type 1 335 -10 4660 181 38 56 chr10 10346841 10347938 -135241350 + L1MC3 LINE L1 5917 6994 -791 3380 5 0 0 chr10 10347988 10348368 -135240920 - L1PA2 LINE L1 0 6155 5776 5243 18 2 0 chr10 10348368 10349400 -135239888 + L1PA2 LINE L1 4772 5804 -351 1288 230 11 53 chr10 10349409 10349766 -135239522 + L1MC3 LINE L1 7139 7480 -305 407 320 19 19 chr10 10350005 10350161 -135239127 - L2 LINE L2 0 3313 3158 195 129 0 0 chr10 10350360 10350391 -135238897 + (CA)n Simple_repeat Simple_repeat 1 31 0 1861 226 34 18 chr10 10350420 10350921 -135238367 - MER90 LTR ERV1 -18 596 88 2139 96 4 4 chr10 10351431 10351757 -135237531 - AluSg1 SINE Alu 0 326 1 2229 107 0 29 chr10 10352727 10353036 -135236252 + AluSg SINE Alu 1 300 -10 195 308 0 77 chr10 10353361 10353439 -135235849 - MIR SINE MIR -121 141 70 5128 176 14 10 chr10 10355007 10356768 -135232520 - L1PA16 LINE L1 -9 6157 4392 324 291 50 14 chr10 10357382 10357523 -135231765 - L1ME1 LINE L1 -80 6086 5941 347 296 48 69 chr10 10357565 10357856 -135231432 - L1MEc LINE L1 -4579 1817 1533 35 0 0 0 chr10 10357887 10357922 -135231366 + AT_rich Low_complexity Low_complexity 1 35 0 865 295 55 25 chr10 10358230 10358533 -135230755 + L1MEc LINE L1 1973 2265 -3950 2178 114 7 0 chr10 10358533 10358830 -135230458 - AluSq SINE Alu -14 299 1 865 295 55 25 chr10 10358830 10359276 -135230012 + L1MEc LINE L1 2265 2717 -3498 250 311 104 43 chr10 10359277 10359441 -135229847 + MLT2E LTR ERVL 1 174 -454 1151 263 73 32 chr10 10359636 10360073 -135229215 + LTR16A1 LTR ERVL 3 457 0 523 336 18 5 chr10 10360397 10360614 -135228674 + ERVL LTR ERVL 316 535 -5229 724 343 58 48 chr10 10360753 10361482 -135227806 + ERVL LTR ERVL 843 1578 -4186 2023 82 19 0 chr10 10362009 10362277 -135227011 - MER4E LTR ERV1 -28 738 466 509 266 10 68 chr10 10362280 10362472 -135226816 + ERVL LTR ERVL 1763 1943 -3711 782 308 5 5 chr10 10362528 10362749 -135226539 + ERVL LTR ERVL 2121 2341 -3423 * 2508 300 73 15 chr10 10362742 10363719 -135225569 + ERVL LTR ERVL 2506 3538 -2226 804 309 42 51 chr10 10363844 10364317 -135224971 - HERV16 LTR ERVL -2207 2789 2321 1495 233 149 10 chr10 10364372 10364780 -135224508 - MLT2B2 LTR ERVL -50 465 1 366 23 0 0 chr10 10365749 10365792 -135223496 + (TTTA)n Simple_repeat Simple_repeat 4 46 0 1963 129 4 0 chr10 10365794 10366072 -135223216 - AluY SINE Alu -32 279 1 522 324 89 37 chr10 10366196 10366545 -135222743 - LTR16B LTR ERVL 0 464 98 2504 112 3 6 chr10 10366583 10366939 -135222349 - THE1A LTR MaLR 0 355 1 333 286 56 48 chr10 10366989 10367220 -135222068 + L1ME LINE L1 5550 5782 -388 1100 243 36 49 chr10 10367220 10367374 -135221914 - MLT1D LTR MaLR 0 505 351 1799 130 0 65 chr10 10367374 10367681 -135221607 - AluSx SINE Alu -14 298 12 1100 243 36 49 chr10 10367681 10367855 -135221433 - MLT1D LTR MaLR -154 351 181 1661 192 0 7 chr10 10367878 10368165 -135221123 + AluJo SINE Alu 7 291 -21 216 0 0 0 chr10 10368754 10368778 -135220510 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2167 125 0 0 chr10 10368869 10369166 -135220122 + AluSx SINE Alu 1 297 -15 856 163 6 67 chr10 10369689 10369867 -135219421 + FRAM SINE Alu 2 168 -8 248 303 91 57 chr10 10370354 10370529 -135218759 + L3b LINE CR1 1205 1385 -198 2142 136 3 0 chr10 10370879 10371189 -135218099 + AluSx SINE Alu 1 311 -1 21 0 0 0 chr10 10371545 10371566 -135217722 + AT_rich Low_complexity Low_complexity 1 21 0 412 338 40 45 chr10 10372355 10372553 -135216735 - MIR SINE MIR -41 221 25 255 204 0 0 chr10 10372762 10372816 -135216472 + (TATG)n Simple_repeat Simple_repeat 4 57 0 453 213 0 0 chr10 10373425 10373505 -135215783 + Tigger5 DNA MER2_type 2237 2316 -7 303 28 0 0 chr10 10374781 10374817 -135214471 + (TG)n Simple_repeat Simple_repeat 1 36 0 210 317 96 0 chr10 10375521 10375625 -135213663 + MIR SINE MIR 148 261 -1 2276 97 0 7 chr10 10377171 10377471 -135211817 - AluSg SINE Alu -12 298 1 245 233 0 0 chr10 10377633 10377676 -135211612 + (TG)n Simple_repeat Simple_repeat 1 43 0 1137 280 59 8 chr10 10377714 10378224 -135211064 + L1M1 LINE L1 2665 3263 -4483 254 279 0 0 chr10 10378249 10378317 -135210971 + Tigger5 DNA MER2_type 2251 2318 -5 316 265 0 0 chr10 10378339 10378407 -135210881 - Tigger5 DNA MER2_type -2235 88 21 889 115 0 0 chr10 10378409 10378539 -135210749 + AluSg/x SINE Alu 181 310 0 474 191 36 0 chr10 10378579 10378663 -135210625 + Tigger5 DNA MER2_type 2237 2323 0 4737 262 40 41 chr10 10378671 10381264 -135208024 + L1MEc LINE L1 1919 4462 -1753 670 264 124 28 chr10 10381385 10381741 -135207547 + L1MEc LINE L1 4423 4812 -1403 1554 301 110 26 chr10 10381748 10382430 -135206858 + L2 LINE L2 1876 2614 -700 231 342 37 25 chr10 10382769 10382930 -135206358 - LTR16C LTR ERVL -3 488 326 237 342 45 0 chr10 10383304 10383415 -135205873 - L1M4 LINE L1 -1293 4853 4738 297 308 97 34 chr10 10383640 10384176 -135205112 - L1M4 LINE L1 -1745 4401 3832 401 79 0 0 chr10 10384352 10384415 -135204873 - L1PB1 LINE L1 0 6151 6089 358 311 61 30 chr10 10384436 10384831 -135204457 - L1MEd LINE L1 -5031 1088 682 543 293 68 24 chr10 10385976 10386225 -135203063 + LTR16B LTR ERVL 116 375 -89 324 368 8 8 chr10 10386513 10386646 -135202642 - MIR SINE MIR -118 144 12 492 260 114 49 chr10 10387530 10387838 -135201450 - MLT1J LTR MaLR -173 338 11 296 365 43 34 chr10 10387852 10388060 -135201228 + L3 LINE CR1 1367 1576 -1 239 293 98 83 chr10 10388113 10388246 -135201042 + L2 LINE L2 3138 3272 0 222 207 0 0 chr10 10388773 10388831 -135200457 + CT-rich Low_complexity Low_complexity 1 58 0 233 182 30 0 chr10 10388831 10388897 -135200391 + (CA)n Simple_repeat Simple_repeat 2 69 0 208 206 0 29 chr10 10388898 10388966 -135200322 + CT-rich Low_complexity Low_complexity 2 67 0 2108 121 0 0 chr10 10389143 10389459 -135199829 + AluSg SINE Alu 1 316 0 329 347 57 0 chr10 10390332 10390456 -135198832 + MIR3 SINE MIR 62 192 -16 2149 121 7 0 chr10 10391935 10392233 -135197055 - AluSx SINE Alu -12 300 1 1786 174 3 25 chr10 10393332 10393680 -135195608 - AluJo SINE Alu 0 341 1 593 334 71 56 chr10 10394222 10394616 -135194672 + L1M4 LINE L1 4281 4667 -1479 1917 137 4 0 chr10 10394616 10394894 -135194394 + AluSx SINE Alu 31 309 -3 593 334 71 56 chr10 10394894 10395429 -135193859 + L1M4 LINE L1 4667 5241 -905 1579 208 7 10 chr10 10395592 10395895 -135193393 + AluJb SINE Alu 1 302 -10 2231 120 0 0 chr10 10396503 10396812 -135192476 - AluSg SINE Alu -1 309 1 2724 131 22 77 chr10 10400109 10400783 -135188505 - MER4B LTR ERV1 0 903 3 1718 209 99 16 chr10 10400887 10401331 -135187957 - LTR29 LTR ERV1 -3 619 139 2159 82 17 0 chr10 10401367 10401658 -135187630 - MER41A LTR ERV1 0 554 259 5134 125 97 127 chr10 10401658 10403259 -135186029 + pTR5 LTR ERV1 745 2438 0 1571 118 73 0 chr10 10403262 10403508 -135185780 - MER41A LTR ERV1 -290 264 1 248 264 0 35 chr10 10403508 10403570 -135185718 - MER34 LTR ERV1 -483 59 1 1239 258 127 19 chr10 10403836 10404316 -135184972 - LTR10B LTR ERV1 -3 544 13 276 260 13 0 chr10 10404563 10404640 -135184648 - MER67B LTR ERV1 -2 659 582 1532 137 42 78 chr10 10404656 10405015 -135184273 + MER4A LTR ERV1 1 346 -318 481 185 237 63 chr10 10405025 10405295 -135183993 + MER4C LTR ERV1 149 465 0 1487 180 21 80 chr10 10405301 10405338 -135183950 - MER31B LTR ERV1 -101 365 327 1206 200 39 58 chr10 10405338 10405648 -135183640 + AluJo SINE Alu 1 304 -8 1487 180 21 80 chr10 10405648 10405987 -135183301 - MER31B LTR ERV1 -139 327 11 263 175 0 32 chr10 10407323 10407386 -135181902 + (TATG)n Simple_repeat Simple_repeat 4 64 0 1871 181 85 57 chr10 10407467 10407963 -135181325 + MER67D LTR ERV1 1 510 -4 670 240 65 99 chr10 10408565 10409033 -135180255 + MER110 LTR ERV1 61 491 0 202 345 12 0 chr10 10409069 10409153 -135180135 + L2 LINE L2 2606 2690 -624 6697 261 86 24 chr10 10409875 10414017 -135175271 - L1ME1 LINE L1 -21 6214 1863 5314 163 40 6 chr10 10414066 10415044 -135174244 - L1MC1 LINE L1 0 6333 5323 22 0 0 0 chr10 10415493 10415515 -135173773 + AT_rich Low_complexity Low_complexity 1 22 0 298 256 41 60 chr10 10415715 10416020 -135173268 - L1ME1 LINE L1 -4533 1863 1463 428 296 79 4 chr10 10416039 10416306 -135172982 - L1ME1 LINE L1 -5030 1366 1080 1745 276 77 51 chr10 10416316 10416363 -135172925 - L1ME1 LINE L1 -5451 945 901 1661 152 44 3 chr10 10416363 10416660 -135172628 - AluJo SINE Alu -3 309 1 1745 276 77 51 chr10 10416660 10416812 -135172476 - L1ME1 LINE L1 -5495 901 754 2085 117 0 0 chr10 10416812 10417102 -135172186 + AluSx SINE Alu 1 290 -22 1745 276 77 51 chr10 10417102 10417762 -135171526 - L1ME1 LINE L1 -5642 754 63 459 0 0 0 chr10 10418379 10418430 -135170858 + (TA)n Simple_repeat Simple_repeat 1 51 0 225 0 0 0 chr10 10418429 10418454 -135170834 + (CA)n Simple_repeat Simple_repeat 2 26 0 * 648 169 5 33 chr10 10418705 10418889 -135170399 + CT-rich Low_complexity Low_complexity 2 180 0 270 0 0 0 chr10 10419493 10419523 -135169765 + (TG)n Simple_repeat Simple_repeat 1 30 0 308 227 57 136 chr10 10420289 10420465 -135168823 - MIR SINE MIR -42 220 59 26 0 0 0 chr10 10421206 10421232 -135168056 + AT_rich Low_complexity Low_complexity 1 26 0 347 271 187 6 chr10 10421289 10421455 -135167833 - L2 LINE L2 0 3313 3118 3533 109 16 3 chr10 10421600 10422236 -135167052 + L1P5 LINE L1 5141 5783 -368 335 234 32 11 chr10 10422247 10422333 -135166955 - L1MC4 LINE L1 -1339 6703 6613 2404 97 25 0 chr10 10422333 10422694 -135166594 + L1PB1 LINE L1 5782 6151 0 9958 19 1 35 chr10 10422892 10424857 -135164431 + L1PA3 LINE L1 4216 6150 -5 189 0 0 0 chr10 10424887 10424908 -135164380 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 22 70 0 0 chr10 10425684 10425727 -135163561 + AT_rich Low_complexity Low_complexity 1 43 0 718 266 60 75 chr10 10426065 10426517 -135162771 - HAL1 LINE L1 -675 1832 1388 440 294 24 59 chr10 10426728 10426898 -135162390 - HAL1 LINE L1 -1234 1273 1110 1933 148 3 7 chr10 10426945 10427249 -135162039 + AluSx SINE Alu 1 303 -9 4804 63 27 3 chr10 10428227 10428865 -135160423 - L1PA8 LINE L1 -6 6166 5514 24 32 0 0 chr10 10430049 10430080 -135159208 + AT_rich Low_complexity Low_complexity 1 31 0 3017 174 50 20 chr10 10430080 10430764 -135158524 - L1MA6 LINE L1 -4 6296 5593 981 172 0 91 chr10 10430770 10430968 -135158320 - AluJo SINE Alu -30 282 103 753 185 0 15 chr10 10430987 10431122 -135158166 - AluJo SINE Alu -177 135 3 1582 207 8 6 chr10 10431122 10431475 -135157813 - L1MA6 LINE L1 -690 5610 5257 1530 210 3 20 chr10 10431486 10431781 -135157507 - AluJo SINE Alu -22 290 1 320 296 0 10 chr10 10432104 10432202 -135157086 + (TA)n Simple_repeat Simple_repeat 1 97 0 351 150 0 0 chr10 10432227 10432287 -135157001 + (TGGA)n Simple_repeat Simple_repeat 4 63 0 369 102 0 0 chr10 10432925 10432984 -135156304 + (TATG)n Simple_repeat Simple_repeat 2 60 0 253 323 65 8 chr10 10433641 10433765 -135155523 + MIR SINE MIR 120 250 -12 264 253 195 0 chr10 10433790 10433877 -135155411 - L2 LINE L2 0 3313 3210 361 185 39 15 chr10 10433909 10434039 -135155249 + (TA)n Simple_repeat Simple_repeat 2 134 0 216 172 54 11 chr10 10434052 10434145 -135155143 + (TA)n Simple_repeat Simple_repeat 2 98 0 314 289 0 11 chr10 10434145 10434235 -135155053 - L1MC4 LINE L1 -1340 6702 6614 * 327 261 11 33 chr10 10434168 10434260 -135155028 + L1MC4 LINE L1 6614 6703 -1339 341 121 65 25 chr10 10434260 10434659 -135154629 + (TA)n Simple_repeat Simple_repeat 1 415 0 271 221 35 9 chr10 10434671 10434784 -135154504 + (TA)n Simple_repeat Simple_repeat 1 116 0 564 212 43 86 chr10 10434815 10435070 -135154218 - L2 LINE L2 -157 3156 2913 245 254 0 70 chr10 10435190 10435261 -135154027 + L2 LINE L2 3203 3268 -4 288 239 28 0 chr10 10436650 10436721 -135152567 + L1ME LINE L1 5734 5806 -315 602 162 0 19 chr10 10438053 10438158 -135151130 - MLT1A2 LTR MaLR -271 103 1 1345 198 50 31 chr10 10438716 10439074 -135150214 - MLT1A1 LTR MaLR 0 365 1 271 251 17 31 chr10 10440264 10440382 -135148906 - MIR SINE MIR -63 145 32 396 373 65 31 chr10 10440452 10440774 -135148514 - L2 LINE L2 -923 2391 2059 258 241 133 12 chr10 10440805 10440888 -135148400 + MER46C DNA MER2_type 28 120 -218 315 307 50 0 chr10 10440943 10441044 -135148244 - HERVL LTR ERVL -3202 2452 2347 942 258 72 32 chr10 10441332 10441799 -135147489 + MER39 LTR ERV1 8 707 0 1469 243 111 4 chr10 10443072 10443524 -135145764 - MER97a DNA MER1_type? -11 883 384 6809 171 58 13 chr10 10443526 10445903 -135143385 - L1MA7 LINE L1 -9 6282 3807 1215 263 66 24 chr10 10445906 10446287 -135143001 - MER97b DNA MER1_type? -656 397 1 216 0 0 0 chr10 10447422 10447446 -135141842 + (CA)n Simple_repeat Simple_repeat 2 25 0 638 108 0 10 chr10 10447447 10447549 -135141739 + (TA)n Simple_repeat Simple_repeat 2 102 0 615 301 23 87 chr10 10448473 10448908 -135140380 + L2 LINE L2 2907 3313 0 265 326 20 20 chr10 10449636 10449734 -135139554 + MIR SINE MIR 27 124 -84 24 32 0 0 chr10 10449899 10449930 -135139358 + AT_rich Low_complexity Low_complexity 1 31 0 24 32 0 0 chr10 10450786 10450817 -135138471 + AT_rich Low_complexity Low_complexity 1 31 0 213 319 117 0 chr10 10450990 10451084 -135138204 + MIR3 SINE MIR 98 202 -6 1823 83 20 8 chr10 10451299 10451551 -135137737 - AluSp SINE Alu 0 313 59 1341 225 126 39 chr10 10453711 10454075 -135135213 - MSTD LTR MaLR 0 396 1 795 51 0 0 chr10 10456859 10456957 -135132331 + HY3 scRNA scRNA 2 99 -2 180 176 0 0 chr10 10457082 10457116 -135132172 + (TA)n Simple_repeat Simple_repeat 2 35 0 183 346 72 53 chr10 10459761 10459969 -135129319 + MIR SINE MIR 34 245 -17 552 77 0 0 chr10 10460064 10460142 -135129146 - L1PA7 LINE L1 -2 6152 6075 1550 59 17 59 chr10 10461197 10461435 -135127853 + L1PA8 LINE L1 5939 6166 -6 665 178 62 0 chr10 10461448 10461577 -135127711 - AluSg/x SINE Alu -6 306 170 253 179 0 0 chr10 10461680 10461719 -135127569 - Alu SINE Alu -262 39 1 264 241 9 125 chr10 10461776 10461851 -135127437 + L1M4 LINE L1 4008 4069 -2077 1639 62 0 0 chr10 10461851 10462066 -135127222 + AluY SINE Alu 86 300 0 264 241 9 125 chr10 10462066 10462101 -135127187 + L1M4 LINE L1 4069 4106 -2040 1186 272 113 24 chr10 10462101 10462453 -135126835 + L1MEc LINE L1 292 712 -5684 2062 176 51 10 chr10 10462453 10462867 -135126421 + MSTB1 LTR MaLR 2 432 0 1186 272 113 24 chr10 10462867 10463065 -135126223 + L1MEc LINE L1 712 891 -5505 634 263 61 5 chr10 10463072 10463285 -135126003 + L1MC2 LINE L1 34 258 -6168 3073 219 105 29 chr10 10463286 10464441 -135124847 + L1MC2 LINE L1 778 2019 -4407 1316 252 24 0 chr10 10464447 10464784 -135124504 - L1M1 LINE L1 -4533 3032 2688 1092 167 34 5 chr10 10464786 10464990 -135124298 + MER2 DNA MER2_type 2 211 -134 2454 63 0 3 chr10 10465032 10465332 -135123956 - AluY SINE Alu -12 299 1 1642 235 29 29 chr10 10465391 10466158 -135123130 - L1M3c LINE L1 -4520 2517 1810 1401 279 77 3 chr10 10466403 10466780 -135122508 - L1M3c LINE L1 -6619 411 7 6059 257 37 20 chr10 10466793 10469195 -135120093 + L1MC2 LINE L1 2054 4492 -1934 359 148 0 0 chr10 10469195 10469273 -135120015 + AluSp/q SINE Alu 233 310 0 6059 257 37 20 chr10 10469273 10469569 -135119719 + L1MC2 LINE L1 4492 4781 -1645 1474 218 112 4 chr10 10469731 10470221 -135119067 + L1MC2 LINE L1 4799 5341 -1085 39 74 0 0 chr10 10470241 10470322 -135118966 + AT_rich Low_complexity Low_complexity 1 81 0 25 0 0 0 chr10 10470412 10470437 -135118851 + AT_rich Low_complexity Low_complexity 1 25 0 5698 134 38 3 chr10 10470601 10471820 -135117468 - L1PA13 LINE L1 -13 6150 4888 5124 189 36 12 chr10 10471822 10473051 -135116237 + L1MC2 LINE L1 5360 6618 -6 2364 262 133 31 chr10 10473058 10475273 -135114015 + L1MEc LINE L1 878 3300 -2915 1476 265 134 19 chr10 10475698 10476039 -135113249 + L1MEc LINE L1 3250 3550 -2665 2273 108 0 0 chr10 10476039 10476346 -135112942 + AluSx SINE Alu 1 307 -5 1476 265 134 19 chr10 10476346 10476526 -135112762 + L1MEc LINE L1 3550 3708 -2507 333 47 0 0 chr10 10476526 10476569 -135112719 + (CA)n Simple_repeat Simple_repeat 2 44 0 1476 265 134 19 chr10 10476569 10476745 -135112543 + L1MEc LINE L1 3708 4029 -2186 589 290 37 71 chr10 10476987 10477107 -135112181 - MIR SINE MIR -1 261 139 1999 128 0 14 chr10 10477107 10477429 -135111859 - AluSq SINE Alu 0 318 1 589 290 37 71 chr10 10477429 10477576 -135111712 - MIR SINE MIR -123 139 2 1182 124 0 11 chr10 10477925 10478102 -135111186 - FRAM SINE Alu -3 173 1 23 68 0 0 chr10 10478558 10478602 -135110686 + AT_rich Low_complexity Low_complexity 1 44 0 1263 247 83 20 chr10 10479517 10479914 -135109374 + L1MCa LINE L1 23 444 -5982 446 138 88 0 chr10 10479944 10480024 -135109264 + L1MC2 LINE L1 6247 6333 -11 1880 166 33 28 chr10 10480318 10480680 -135108608 - THE1B LTR MaLR 0 364 1 1641 261 86 49 chr10 10480770 10481583 -135107705 - L1ME3A LINE L1 -11 6970 6128 203 61 30 0 chr10 10481914 10481947 -135107341 + (CAAA)n Simple_repeat Simple_repeat 1 34 0 182 36 0 36 chr10 10481990 10482018 -135107270 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 1180 292 51 47 chr10 10482428 10482888 -135106400 - L1ME3A LINE L1 -864 6093 5627 2356 74 0 3 chr10 10482888 10483187 -135106101 - AluY SINE Alu -13 298 1 1180 292 51 47 chr10 10483187 10483531 -135105757 - L1ME3A LINE L1 -1330 5627 5286 362 152 15 0 chr10 10483585 10483651 -135105637 - LTR41 LTR ERVL -5 768 702 237 253 0 50 chr10 10483657 10483756 -135105532 - L1MC4 LINE L1 -1339 6703 6610 328 262 16 145 chr10 10483766 10484083 -135105205 - LTR41 LTR ERVL -60 713 438 339 245 82 10 chr10 10484407 10484505 -135104783 - LTR41 LTR ERVL -586 187 83 1040 276 95 25 chr10 10484535 10485125 -135104163 - L1ME3A LINE L1 -1853 5104 4474 771 288 21 16 chr10 10485305 10485548 -135103740 + LTR16B LTR ERVL 221 464 0 1138 268 76 83 chr10 10485596 10486365 -135102923 - L1M4b LINE L1 -2606 4351 3578 2086 134 0 0 chr10 10486365 10486671 -135102617 - AluSg SINE Alu -4 306 1 1138 268 76 83 chr10 10486671 10487532 -135101756 - L1M4b LINE L1 -3379 3578 2770 637 24 0 0 chr10 10487696 10487781 -135101507 - L1PA4 LINE L1 -142 6013 5929 403 344 125 14 chr10 10487807 10488162 -135101126 - L1M4b LINE L1 -5050 1910 1419 790 299 69 53 chr10 10488187 10488683 -135100605 + MLT1G1 LTR MaLR 1 595 0 1981 153 122 13 chr10 10489140 10489526 -135099762 + MSTA LTR MaLR 1 428 0 2008 173 20 3 chr10 10489558 10489916 -135099372 + MLT1A1 LTR MaLR 1 364 -1 297 305 74 0 chr10 10490172 10490267 -135099021 - MIR SINE MIR -158 104 3 719 256 19 10 chr10 10493276 10493483 -135095805 - MLT1A1 LTR MaLR 0 365 157 660 120 0 10 chr10 10493497 10493597 -135095691 - AluYb8 SINE Alu -16 302 204 709 117 51 15 chr10 10493603 10493740 -135095548 - MLT1A1 LTR MaLR -215 150 9 183 259 47 71 chr10 10494143 10494228 -135095060 + L2 LINE L2 3189 3271 -1 2049 140 39 22 chr10 10495783 10496141 -135093147 - THE1B LTR MaLR 0 364 1 1373 249 81 43 chr10 10496729 10497259 -135092029 + L1MC4 LINE L1 6491 7040 -1002 1122 284 82 27 chr10 10497283 10497502 -135091786 + L1MC4 LINE L1 7232 7438 -604 457 102 0 91 chr10 10497502 10497539 -135091749 + MADE1 DNA Mariner 1 40 -40 2328 108 0 0 chr10 10497539 10497834 -135091454 - AluSc SINE Alu -14 295 1 457 102 0 91 chr10 10497834 10497884 -135091404 + MADE1 DNA Mariner 40 80 0 1122 284 82 27 chr10 10497884 10498253 -135091035 + L1MC4 LINE L1 7438 7852 -190 24 0 0 0 chr10 10498870 10498894 -135090394 + AT_rich Low_complexity Low_complexity 1 24 0 812 253 39 0 chr10 10499053 10499235 -135090053 - MER5A DNA MER1_type 0 189 1 3877 172 41 23 chr10 10500128 10500902 -135088386 - L1MA7 LINE L1 0 6291 5532 2143 129 7 0 chr10 10500902 10501197 -135088091 - AluSp SINE Alu -16 297 1 3877 172 41 23 chr10 10501197 10502163 -135087125 - L1MA7 LINE L1 -759 5532 4478 1421 210 24 6 chr10 10502194 10502532 -135086756 + L1 LINE L1 3850 4193 -1953 1369 164 105 4 chr10 10502534 10502772 -135086516 + AluJb SINE Alu 2 263 -49 396 0 0 0 chr10 10502800 10502844 -135086444 + (CA)n Simple_repeat Simple_repeat 1 44 0 411 193 11 0 chr10 10502853 10502941 -135086347 + MLT1A2 LTR MaLR 269 357 -17 342 349 155 9 chr10 10503285 10503517 -135085771 - L1MEc LINE L1 -6094 302 37 358 296 26 40 chr10 10503764 10503916 -135085372 - HAL1b LINE L1 -857 491 342 651 111 0 0 chr10 10504692 10504791 -135084497 + AluSg/x SINE Alu 207 305 -7 4001 167 11 10 chr10 10504946 10505279 -135084009 - L1PA16 LINE L1 -9 6157 5826 2296 111 0 13 chr10 10505279 10505595 -135083693 - AluSx SINE Alu 0 312 1 4001 167 11 10 chr10 10505595 10505984 -135083304 - L1PA16 LINE L1 -340 5826 5434 22 0 0 0 chr10 10506030 10506052 -135083236 + AT_rich Low_complexity Low_complexity 1 22 0 25 31 0 0 chr10 10506682 10506714 -135082574 + AT_rich Low_complexity Low_complexity 1 32 0 605 234 9 7 chr10 10506879 10507117 -135082171 - LTR16B LTR ERVL -175 289 1 226 336 88 26 chr10 10507129 10507242 -135082046 - MIR SINE MIR -117 145 26 195 42 0 0 chr10 10507245 10507269 -135082019 + (TAGG)n Simple_repeat Simple_repeat 2 25 0 400 281 102 18 chr10 10507900 10508067 -135081221 - MLT1J2 LTR MaLR -267 183 3 2344 82 7 0 chr10 10508222 10508525 -135080763 - AluSp SINE Alu -8 305 1 328 358 22 7 chr10 10508786 10508923 -135080365 + MIR3 SINE MIR 7 145 -63 990 288 75 7 chr10 10509950 10510339 -135078949 - MLT1J1 LTR MaLR 0 446 38 330 351 53 11 chr10 10510429 10510617 -135078671 - MIR SINE MIR -66 196 1 195 324 68 0 chr10 10511406 10511480 -135077808 + MIR SINE MIR 65 143 -65 264 289 87 19 chr10 10511594 10511698 -135077590 - MIR SINE MIR -65 143 33 204 83 62 0 chr10 10512149 10512197 -135077091 + (TA)n Simple_repeat Simple_repeat 2 52 0 1709 208 32 5 chr10 10512769 10513149 -135076139 + MLT1B LTR MaLR 1 390 0 570 326 16 40 chr10 10514014 10514197 -135075091 + MLT1I LTR MaLR 75 250 -159 1580 211 18 101 chr10 10514197 10514743 -135074545 - MLT1D LTR MaLR -4 501 1 570 326 16 40 chr10 10514743 10514863 -135074425 + MLT1I LTR MaLR 250 371 -38 253 333 44 11 chr10 10515033 10515216 -135074072 - L1ME LINE L1 -409 5712 5524 2103 135 0 0 chr10 10517067 10517364 -135071924 + AluSc SINE Alu 1 297 -12 1672 186 0 11 chr10 10518446 10518726 -135070562 + AluJb SINE Alu 5 281 -31 2147 113 7 13 chr10 10519619 10519900 -135069388 + AluSg SINE Alu 1 282 -28 240 35 0 0 chr10 10519900 10519929 -135069359 + (TC)n Simple_repeat Simple_repeat 1 29 0 198 0 0 0 chr10 10519928 10519950 -135069338 + (CA)n Simple_repeat Simple_repeat 1 22 0 * 2147 113 7 13 chr10 10519929 10519970 -135069318 + AluSg SINE Alu 282 300 -10 24 0 0 0 chr10 10520267 10520291 -135068997 + AT_rich Low_complexity Low_complexity 1 24 0 982 289 88 13 chr10 10520308 10520764 -135068524 - LTR33 LTR ERVL -9 512 23 185 346 74 19 chr10 10522109 10522271 -135067017 - L2 LINE L2 -10 3303 3133 565 278 40 28 chr10 10524750 10524926 -135064362 + MER45A DNA AcHobo 1 178 0 486 294 81 57 chr10 10526159 10526407 -135062881 - MIR SINE MIR 0 262 9 461 356 76 20 chr10 10526487 10526790 -135062498 + MLT1I LTR MaLR 73 392 -17 329 353 112 0 chr10 10526988 10527104 -135062184 + MIR SINE MIR 17 145 -63 2027 240 42 13 chr10 10527161 10527860 -135061428 + L1MC3 LINE L1 4578 5296 -850 * 2385 220 37 22 chr10 10527858 10528541 -135060747 + L1MB2 LINE L1 4133 4825 -1321 866 197 0 0 chr10 10528541 10528688 -135060600 + AluSg/x SINE Alu 157 303 -7 742 206 18 6 chr10 10528690 10528860 -135060428 + L1MB2 LINE L1 4819 4990 -1156 326 263 8 17 chr10 10528870 10528988 -135060300 - L1MA9 LINE L1 -157 6155 6039 3832 176 37 53 chr10 10529040 10530244 -135059044 + L1MB2 LINE L1 4980 6171 0 * 5783 195 42 61 chr10 10530240 10530837 -135058451 + L1MC3 LINE L1 5283 5890 -1895 2427 72 0 3 chr10 10530837 10531141 -135058147 - AluY SINE Alu -8 303 1 5783 195 42 61 chr10 10531141 10532218 -135057070 + L1MC3 LINE L1 5890 6925 -860 326 220 11 22 chr10 10532231 10532284 -135057004 + L1MC4a LINE L1 6779 6832 -976 315 104 0 0 chr10 10532284 10532332 -135056956 + (CA)n Simple_repeat Simple_repeat 1 48 0 326 220 11 22 chr10 10532332 10532369 -135056919 + L1MC4a LINE L1 6832 6868 -940 189 0 0 0 chr10 10534339 10534360 -135054928 + (T)n Simple_repeat Simple_repeat 1 21 0 1391 182 11 12 chr10 10535673 10536228 -135053060 - MER6 DNA MER2_type -1 864 1 1836 131 0 0 chr10 10537218 10537470 -135051818 - AluSg SINE Alu -16 294 43 368 308 122 52 chr10 10538629 10538801 -135050487 + MIR SINE MIR 30 213 -49 330 243 118 66 chr10 10539392 10539544 -135049744 - MIR SINE MIR -73 189 30 195 204 0 0 chr10 10540052 10540101 -135049187 + (TA)n Simple_repeat Simple_repeat 1 49 0 * 227 169 0 34 chr10 10540056 10540115 -135049173 + L1MC4 LINE L1 6648 6704 -1338 182 37 37 0 chr10 10540125 10540152 -135049136 + (TA)n Simple_repeat Simple_repeat 1 28 0 420 312 49 56 chr10 10541191 10541582 -135047706 + L1ME LINE L1 227 614 -5591 23 0 0 0 chr10 10541999 10542022 -135047266 + AT_rich Low_complexity Low_complexity 1 23 0 427 314 117 24 chr10 10542092 10542382 -135046906 + L1ME LINE L1 1949 2265 -4131 311 318 195 36 chr10 10542455 10542902 -135046386 + L3 LINE CR1 638 1155 -422 1902 143 7 0 chr10 10543652 10543932 -135045356 - AluSx SINE Alu 0 312 31 466 321 160 5 chr10 10544043 10544255 -135045033 + MIR SINE MIR 2 246 -16 190 268 12 85 chr10 10545013 10545095 -135044193 - MIR SINE MIR -77 185 110 21 36 0 0 chr10 10545306 10545334 -135043954 + AT_rich Low_complexity Low_complexity 1 28 0 952 204 48 109 chr10 10546625 10547002 -135042286 + LTR26B LTR ERV1 1 354 -177 213 39 0 0 chr10 10548355 10548381 -135040907 + (T)n Simple_repeat Simple_repeat 1 26 0 549 333 15 5 chr10 10548780 10548981 -135040307 - MIR SINE MIR -57 205 3 2082 133 10 3 chr10 10549232 10549533 -135039755 - AluSc SINE Alu -6 303 1 1179 198 3 73 chr10 10549792 10550106 -135039182 + MLT2B1 LTR ERVL 1 292 -228 2566 186 19 25 chr10 10550109 10550442 -135038846 - MER41E LTR ERV1 0 512 182 2830 99 0 3 chr10 10550442 10550817 -135038471 - THE1C LTR MaLR -1 374 1 2566 186 19 25 chr10 10550817 10550998 -135038290 - MER41E LTR ERV1 -330 182 1 403 276 8 16 chr10 10551081 10551208 -135038080 + MLT2B1 LTR ERVL 343 468 -52 180 146 67 0 chr10 10551230 10551319 -135037969 + (TA)n Simple_repeat Simple_repeat 2 96 0 317 102 0 0 chr10 10551328 10551377 -135037911 + MLT2B1 LTR ERVL 472 520 0 368 340 0 35 chr10 10551402 10551546 -135037742 + MIR SINE MIR 3 141 -121 1706 169 27 32 chr10 10551652 10552024 -135037264 + L1MA3 LINE L1 5926 6295 -10 23 0 0 0 chr10 10552734 10552757 -135036531 + AT_rich Low_complexity Low_complexity 1 23 0 180 262 0 0 chr10 10553034 10553076 -135036212 - L2 LINE L2 -31 3282 3241 22 70 0 0 chr10 10554753 10554796 -135034492 + AT_rich Low_complexity Low_complexity 1 43 0 226 241 86 9 chr10 10554824 10554940 -135034348 - LTR16C LTR ERVL 0 491 367 265 271 66 8 chr10 10556967 10557089 -135032199 - L1M3 LINE L1 -618 5562 5434 220 179 0 0 chr10 10557361 10557400 -135031888 - MIR SINE MIR -212 50 12 1178 259 123 7 chr10 10557753 10558167 -135031121 + LTR40b LTR ERVL 1 462 0 868 360 115 26 chr10 10558288 10559193 -135030095 + L2 LINE L2 1993 2977 -337 382 241 103 0 chr10 10559580 10559696 -135029592 + MLT1H1 LTR MaLR 417 544 -11 854 243 83 71 chr10 10559700 10560001 -135029287 - ERVL LTR ERVL -1236 4528 4219 2320 98 0 20 chr10 10560001 10560306 -135028982 - AluSq SINE Alu -14 299 1 854 243 83 71 chr10 10560306 10560411 -135028877 - ERVL LTR ERVL -1545 4219 4117 377 312 50 47 chr10 10562825 10563510 -135025778 + L1M4 LINE L1 3087 3773 -2373 29 0 0 25 chr10 10563814 10563841 -135025447 + AT_rich Low_complexity Low_complexity 1 28 -11 1828 47 0 4 chr10 10563841 10564075 -135025213 - L1PA4 LINE L1 -3 6152 5920 29 0 0 25 chr10 10564075 10564087 -135025201 + AT_rich Low_complexity Low_complexity 28 39 0 253 239 145 22 chr10 10564962 10565100 -135024188 - MER104 DNA Tc2 -4 176 22 336 48 0 0 chr10 10565671 10565713 -135023575 + (CA)n Simple_repeat Simple_repeat 2 43 0 3854 179 78 31 chr10 10566642 10566664 -135022624 - L1MCa LINE L1 -5424 1002 982 3949 94 11 4 chr10 10566664 10567214 -135022074 + MER41A LTR ERV1 1 554 0 3854 179 78 31 chr10 10567214 10567343 -135021945 - L1MCa LINE L1 -5444 982 860 1488 161 158 60 chr10 10567343 10567729 -135021559 + MSTB LTR MaLR 1 424 -2 3854 179 78 31 chr10 10567729 10568515 -135020773 - L1MCa LINE L1 -5566 860 20 714 118 17 42 chr10 10568567 10568686 -135020602 - AluJb SINE Alu -163 149 34 26 0 0 0 chr10 10569762 10569788 -135019500 + AT_rich Low_complexity Low_complexity 1 26 0 1000 140 0 7 chr10 10569793 10569936 -135019352 + AluJb SINE Alu 1 142 -170 1629 110 9 0 chr10 10570037 10570256 -135019032 - AluSx SINE Alu -91 221 1 1845 147 20 124 chr10 10570993 10571317 -135017971 - MER7C DNA MER2_type -2607 421 154 3166 151 47 0 chr10 10571317 10571874 -135017414 - L1PB3 LINE L1 -6 6148 5566 1845 147 20 124 chr10 10571874 10571991 -135017297 - MER7C DNA MER2_type -2874 154 26 2380 77 3 0 chr10 10572441 10572770 -135016518 + AluY SINE Alu 10 311 0 1655 177 108 0 chr10 10573091 10573435 -135015853 + MSTA LTR MaLR 2 382 -46 1025 214 5 0 chr10 10573488 10573694 -135015594 + Tigger3(Golem) DNA MER2_type 46 252 -2777 230 135 0 0 chr10 10573720 10573757 -135015531 + MSTA LTR MaLR 390 426 -2 26 30 0 0 chr10 10574120 10574153 -135015135 + AT_rich Low_complexity Low_complexity 1 33 0 297 263 91 0 chr10 10575809 10575908 -135013380 + MER20B DNA MER1_type 63 170 -613 22 0 0 0 chr10 10576035 10576057 -135013231 + AT_rich Low_complexity Low_complexity 1 22 0 4705 62 6 4 chr10 10576080 10576770 -135012518 + L1PA7 LINE L1 5213 5904 -250 950 130 56 0 chr10 10576770 10576931 -135012357 - LTR12 LTR ERV1 0 714 545 7331 114 18 22 chr10 10576944 10579029 -135010259 - HERV9 LTR ERV1 -6180 2219 59 732 122 47 74 chr10 10579008 10579156 -135010132 - pTR5 LTR ERV1 -1994 444 301 * 321 263 10 0 chr10 10579156 10579255 -135010033 - LTR30 LTR ERV1 -79 643 544 1370 103 205 6 chr10 10579255 10579624 -135009664 - LTR12 LTR ERV1 -417 2021 57 247 196 0 0 chr10 10579624 10579675 -135009613 - LTR30 LTR ERV1 -670 52 2 1754 106 0 4 chr10 10579676 10579930 -135009358 + L1PA7 LINE L1 5901 6153 -1 440 206 7 0 chr10 10581897 10582033 -135007255 + (TG)n Simple_repeat Simple_repeat 2 138 0 535 196 12 0 chr10 10582055 10582228 -135007060 + (TG)n Simple_repeat Simple_repeat 2 176 0 310 208 0 0 chr10 10582400 10582472 -135006816 + FLAM SINE Alu 40 111 -22 180 0 0 0 chr10 10582481 10582501 -135006787 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 282 293 50 45 chr10 10582537 10582896 -135006392 - L1MEd LINE L1 -4866 1253 893 1744 132 70 59 chr10 10583446 10583748 -135005540 + THE1C LTR MaLR 1 310 -65 2021 133 0 0 chr10 10583748 10584065 -135005223 + AluSc SINE Alu 1 317 0 1744 132 70 59 chr10 10584065 10584132 -135005156 + THE1C LTR MaLR 310 375 0 234 286 29 0 chr10 10585194 10585299 -135003989 + (TA)n Simple_repeat Simple_repeat 2 109 0 1365 229 8 24 chr10 10585299 10585671 -135003617 + MLT1A2 LTR MaLR 9 374 0 310 332 126 5 chr10 10586290 10586480 -135002808 + MIR SINE MIR 1 213 -49 460 283 28 90 chr10 10586685 10586862 -135002426 + MIR SINE MIR 59 224 -38 24 32 0 0 chr10 10587448 10587479 -135001809 + AT_rich Low_complexity Low_complexity 1 31 0 482 339 36 39 chr10 10589615 10590028 -134999260 + ERVL LTR ERVL 1005 1416 -4348 573 358 42 26 chr10 10590029 10590415 -134998873 + ERVL LTR ERVL 1817 2208 -3556 483 252 71 59 chr10 10590713 10590951 -134998337 + Charlie2a DNA MER1_type 727 967 -1895 28 29 0 0 chr10 10591214 10591249 -134998039 + AT_rich Low_complexity Low_complexity 1 35 0 279 337 107 16 chr10 10591548 10591735 -134997553 - MIR SINE MIR -27 235 32 426 202 0 0 chr10 10592865 10592949 -134996339 - L1MC3 LINE L1 -26 7759 7676 551 109 33 11 chr10 10592954 10593046 -134996242 + MER4A LTR ERV1 5 98 -566 1707 139 157 80 chr10 10593046 10593421 -134995867 + MER4A LTR ERV1 261 664 0 2826 188 18 4 chr10 10593422 10593966 -134995322 - L1MC3 LINE L1 -107 7678 7127 250 122 0 0 chr10 10593968 10594009 -134995279 + 5S rRNA rRNA 2 42 -79 315 73 0 0 chr10 10594024 10594065 -134995223 + 5S rRNA rRNA 2 42 -79 525 187 47 33 chr10 10594066 10594216 -134995072 - L1MC3 LINE L1 -647 7138 6987 797 199 126 16 chr10 10594337 10594528 -134994760 - MLT1A2 LTR MaLR -162 212 1 468 315 59 33 chr10 10594802 10595192 -134994096 - L1M4 LINE L1 -3443 2703 2304 22 0 0 0 chr10 10595368 10595390 -134993898 + AT_rich Low_complexity Low_complexity 1 22 0 229 272 49 37 chr10 10596870 10596951 -134992337 + L2 LINE L2 3191 3272 0 1827 143 0 4 chr10 10596954 10597213 -134992075 + AluSx SINE Alu 24 281 -31 309 51 0 0 chr10 10597216 10597255 -134992033 + (CA)n Simple_repeat Simple_repeat 2 40 0 276 284 42 30 chr10 10597598 10597774 -134991514 + MLT1J2 LTR MaLR 263 436 -10 1976 174 20 15 chr10 10597853 10598262 -134991026 + L1MC1 LINE L1 5922 6332 -1 220 349 54 49 chr10 10598638 10598940 -134990348 + L2 LINE L2 2894 3258 -14 282 269 40 16 chr10 10599517 10599656 -134989632 - MLT1J LTR MaLR 0 511 427 2672 178 26 72 chr10 10599947 10600588 -134988700 + LTR9 LTR ERV1 1 612 0 983 235 49 3 chr10 10600903 10601081 -134988207 - MER33 DNA MER1_type -2265 320 121 2075 137 3 3 chr10 10601081 10601381 -134987907 - AluSq SINE Alu -13 300 1 983 235 49 3 chr10 10601381 10601508 -134987780 - MER33 DNA MER1_type -2464 121 1 280 259 26 129 chr10 10652201 10652317 -134936971 + MER5A DNA MER1_type 10 113 -76 217 240 21 94 chr10 10652864 10652960 -134936328 + MIR SINE MIR 104 192 -70 1805 159 0 7 chr10 10654326 10654643 -134934645 - AluSx SINE Alu 0 315 1 2229 109 0 0 chr10 10655269 10655573 -134933715 - AluSq SINE Alu -9 304 1 1926 52 4 0 chr10 10655695 10655975 -134933313 - AluY SINE Alu 0 333 53 206 62 31 0 chr10 10657575 10657607 -134931681 + (GA)n Simple_repeat Simple_repeat 2 34 0 1535 209 31 14 chr10 10658325 10658684 -134930604 + MLT1A1 LTR MaLR 1 365 0 21 0 0 0 chr10 10659173 10659194 -134930094 + AT_rich Low_complexity Low_complexity 1 21 0 2200 129 3 0 chr10 10659242 10659545 -134929743 - AluSx SINE Alu -8 304 1 329 307 33 36 chr10 10659801 10660104 -134929184 + L1ME LINE L1 5484 5785 -336 32 67 0 0 chr10 10660129 10660189 -134929099 + AT_rich Low_complexity Low_complexity 1 60 0 908 177 135 30 chr10 10660783 10661049 -134928239 + MER58B DNA MER1_type 46 339 -2 1785 168 93 72 chr10 10661203 10661620 -134927668 - MSTB LTR MaLR 0 426 1 720 308 14 0 chr10 10661635 10661843 -134927445 + MIR SINE MIR 52 262 0 2090 96 3 48 chr10 10662303 10662641 -134926647 + AluSg SINE Alu 1 325 0 229 270 34 0 chr10 10663067 10663156 -134926132 + L2 LINE L2 3004 3095 -177 5141 143 19 11 chr10 10663316 10664247 -134925041 + L1MA5 LINE L1 5357 6295 -5 22 35 0 0 chr10 10664313 10664342 -134924946 + AT_rich Low_complexity Low_complexity 1 29 0 270 0 0 0 chr10 10664371 10664401 -134924887 + (TG)n Simple_repeat Simple_repeat 1 60 0 270 0 0 0 chr10 10664401 10664431 -134924857 + (TG)n Simple_repeat Simple_repeat 2 31 0 928 259 169 25 chr10 10664532 10665307 -134923981 + L1ME1 LINE L1 3814 4700 -1446 2754 222 42 47 chr10 10665307 10666205 -134923083 + L1ME1 LINE L1 5254 6147 -19 204 200 21 42 chr10 10668756 10668851 -134920437 + T-rich Low_complexity Low_complexity 3 95 0 738 352 25 22 chr10 10669048 10669644 -134919644 - HERV16 LTR ERVL -423 5341 4744 322 284 133 34 chr10 10670014 10670278 -134919010 - HERV16 LTR ERVL -1442 4212 3923 352 346 19 0 chr10 10670553 10670715 -134918573 - HERV16 LTR ERVL -1950 3535 3371 543 120 0 0 chr10 10670824 10670899 -134918389 + AluSg/x SINE Alu 217 291 -21 238 268 18 0 chr10 10671000 10671056 -134918232 + (TGGA)n Simple_repeat Simple_repeat 1 57 0 1432 172 18 11 chr10 10671062 10671397 -134917891 - MLT2C2 LTR ERVL -52 345 5 382 339 19 26 chr10 10671510 10671906 -134917382 - HERV16 LTR ERVL -3128 1868 1524 857 196 6 11 chr10 10672807 10672986 -134916302 + MER5B DNA MER1_type 1 178 0 681 224 86 11 chr10 10672994 10673168 -134916120 - MER5A DNA MER1_type -1 188 2 2068 147 33 25 chr10 10673767 10674128 -134915160 - THE1B LTR MaLR 0 364 1 354 45 0 0 chr10 10674270 10674314 -134914974 + (TTGG)n Simple_repeat Simple_repeat 2 45 0 1601 252 73 8 chr10 10674546 10675026 -134914262 + LTR40a LTR ERVL 1 511 -8 357 344 18 27 chr10 10675029 10675250 -134914038 + L1MC4a LINE L1 5664 5882 -1926 736 288 63 34 chr10 10675473 10675855 -134913433 + MLT1J LTR MaLR 75 467 -44 662 284 62 27 chr10 10676890 10677228 -134912060 + MLT1C LTR MaLR 118 467 0 268 254 84 0 chr10 10677228 10677299 -134911989 - MIR SINE MIR -81 181 105 242 329 0 0 chr10 10678295 10678374 -134910914 - MIR SINE MIR -10 252 174 817 246 83 49 chr10 10678384 10678831 -134910457 + MLT1C LTR MaLR 6 467 0 533 268 37 37 chr10 10678831 10678995 -134910293 - MIR SINE MIR -92 170 7 1125 211 132 6 chr10 10679748 10680047 -134909241 + MER63B DNA MER1_type 1 261 -801 5057 91 21 101 chr10 10680047 10680448 -134908840 - L1MA2 LINE L1 0 6304 5872 2132 141 0 0 chr10 10680448 10680747 -134908541 - AluSx SINE Alu -13 299 1 5057 91 21 101 chr10 10680747 10681273 -134908015 - L1MA2 LINE L1 -432 5872 5454 2127 126 16 10 chr10 10681273 10681583 -134907705 - AluSx SINE Alu 0 312 1 5057 91 21 101 chr10 10681583 10681611 -134907677 - L1MA2 LINE L1 -850 5454 5425 1125 211 132 6 chr10 10681611 10681653 -134907635 + MER63B DNA MER1_type 261 385 -51 303 125 0 150 chr10 10682280 10682324 -134906964 - MER73 LTR ERVL 0 644 616 2372 82 0 3 chr10 10682324 10682628 -134906660 - AluSx SINE Alu -9 303 1 303 125 0 150 chr10 10682628 10682663 -134906625 - MER73 LTR ERVL -28 616 577 1432 205 121 3 chr10 10682763 10683153 -134906135 - MER73 LTR ERVL -208 436 1 214 361 89 24 chr10 10683486 10683655 -134905633 - L2 LINE L2 -4 3268 3089 2161 125 3 0 chr10 10683773 10684076 -134905212 - AluSp SINE Alu -9 304 1 288 299 60 54 chr10 10684080 10684247 -134905041 - L2 LINE L2 -597 2717 2550 370 275 81 23 chr10 10684533 10684732 -134904556 + LTR16B LTR ERVL 266 450 0 453 217 70 26 chr10 10685284 10685399 -134903889 + MIR SINE MIR 106 225 -37 399 216 0 0 chr10 10685468 10685579 -134903709 + GA-rich Low_complexity Low_complexity 1 111 0 2460 190 91 12 chr10 10685883 10686446 -134902842 + MER21B LTR ERV1 1 607 -256 1397 210 7 3 chr10 10686559 10686849 -134902439 + MER21B LTR ERV1 572 862 -1 3946 32 2 0 chr10 10686854 10687327 -134901961 + L1PA4 LINE L1 5681 6154 -1 1142 89 0 0 chr10 10687395 10687541 -134901747 - AluSg/x SINE Alu -6 306 161 287 278 62 10 chr10 10688609 10688706 -134900582 - L3 LINE CR1 -94 1483 1382 789 216 13 0 chr10 10688807 10688960 -134900328 + FRAM SINE Alu 1 155 -11 746 22 0 0 chr10 10690149 10690240 -134899048 + L1PA2 LINE L1 6064 6154 -1 224 30 30 0 chr10 10690533 10690566 -134898722 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 21 0 0 0 chr10 10690748 10690769 -134898519 + AT_rich Low_complexity Low_complexity 1 21 0 880 264 74 89 chr10 10690821 10691336 -134897952 + L2 LINE L2 1419 1925 -1389 243 293 24 0 chr10 10691569 10691651 -134897637 + L2 LINE L2 1616 1699 -1615 360 289 73 37 chr10 10691739 10691957 -134897331 + LTR16A LTR ERVL 72 297 -153 696 296 98 17 chr10 10692057 10692526 -134896762 + L1M4 LINE L1 3652 4158 -1988 752 158 0 17 chr10 10692566 10692686 -134896602 + FLAM_C SINE Alu 2 119 -14 1480 300 93 24 chr10 10692880 10693416 -134895872 + L1M4 LINE L1 4263 4761 -1385 342 67 0 0 chr10 10693416 10693461 -134895827 + (CA)n Simple_repeat Simple_repeat 2 46 0 1480 300 93 24 chr10 10693461 10693814 -134895474 + L1M4 LINE L1 4761 5237 -909 2410 230 66 13 chr10 10693814 10694432 -134894856 - MER82 DNA MER2_type 0 653 3 1480 300 93 24 chr10 10694432 10694587 -134894701 + L1M4 LINE L1 5237 5380 -766 2344 130 8 6 chr10 10695425 10695787 -134893501 + THE1B LTR MaLR 1 363 -1 267 234 96 32 chr10 10697850 10697944 -134891344 + L2 LINE L2 3209 3308 -5 2007 158 68 23 chr10 10698572 10699001 -134890287 - L1MA8 LINE L1 -18 6273 5826 1728 170 0 25 chr10 10699009 10699286 -134890002 + AluJb SINE Alu 9 278 -34 433 119 0 0 chr10 10699286 10699345 -134889943 + Alu SINE Alu 235 293 -19 2028 62 0 0 chr10 10699376 10699616 -134889672 - AluY SINE Alu -30 281 42 2427 155 69 12 chr10 10699646 10700379 -134888909 - L1MA8 LINE L1 -492 5808 5033 1199 171 9 22 chr10 10701607 10701835 -134887453 + AluJo SINE Alu 68 292 -20 1710 169 52 86 chr10 10702468 10702701 -134886587 - MSTA LTR MaLR 0 428 216 1875 110 0 0 chr10 10702701 10702955 -134886333 - AluSx SINE Alu -19 293 40 1710 169 52 86 chr10 10702955 10703164 -134886124 - MSTA LTR MaLR -212 216 1 23 0 0 0 chr10 10703672 10703695 -134885593 + AT_rich Low_complexity Low_complexity 1 23 0 204 398 10 10 chr10 10704607 10704705 -134884583 - MIR3 SINE MIR -54 154 57 258 343 128 42 chr10 10704833 10704952 -134884336 - L2 LINE L2 -644 2670 2563 750 206 103 49 chr10 10704952 10705175 -134884113 - MER46A DNA MER2_type -1 235 1 258 343 128 42 chr10 10705175 10705367 -134883921 - L2 LINE L2 -751 2563 2332 2192 119 3 3 chr10 10706603 10706905 -134882383 - AluSc SINE Alu -7 302 1 2433 106 0 14 chr10 10707599 10707966 -134881322 - L1PB1 LINE L1 -1 6150 5789 1531 143 15 11 chr10 10707966 10708239 -134881049 - L1PB1 LINE L1 -605 5546 5273 869 254 4 48 chr10 10708346 10708574 -134880714 - MER58A DNA MER1_type -6 218 1 1610 258 39 33 chr10 10708693 10709208 -134880080 - LTR40a LTR ERVL 0 519 2 1370 192 51 7 chr10 10710318 10710594 -134878694 + AluJo SINE Alu 8 295 -17 384 216 88 0 chr10 10710636 10710738 -134878550 - L1MA4A LINE L1 -6 6297 6187 4223 155 47 4 chr10 10713195 10713938 -134875350 + L1PA15 LINE L1 5391 6165 0 2466 75 13 0 chr10 10714206 10714512 -134874776 - AluY SINE Alu -1 310 1 24 0 0 0 chr10 10714561 10714585 -134874703 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr10 10714848 10714870 -134874418 + AT_rich Low_complexity Low_complexity 1 22 0 264 309 87 0 chr10 10715883 10716009 -134873279 - MIR SINE MIR -74 188 52 238 301 27 0 chr10 10718109 10718202 -134871086 - MIR3 SINE MIR -24 184 87 2283 51 3 0 chr10 10718738 10719032 -134870256 + L1PA5 LINE L1 5860 6154 0 429 289 134 34 chr10 10719057 10719296 -134869992 + MLT1J2 LTR MaLR 188 450 0 1587 209 112 5 chr10 10721268 10721704 -134867584 + L1MA9 LINE L1 5792 6274 -38 419 223 43 17 chr10 10721744 10721861 -134867427 + AluJ/FLAM SINE Alu 2 101 -201 279 275 21 49 chr10 10722384 10722526 -134866762 - L1MC4a LINE L1 -1853 5955 5818 555 284 33 0 chr10 10722608 10722791 -134866497 - L1ME3A LINE L1 -61 6109 5921 2519 60 0 0 chr10 10722793 10723093 -134866195 + AluY SINE Alu 1 300 -11 262 215 0 31 chr10 10723148 10723213 -134866075 - MLT1I LTR MaLR -16 574 512 432 272 40 25 chr10 10723361 10723679 -134865609 - MLT1I LTR MaLR -43 366 6 948 330 81 34 chr10 10723889 10724508 -134864780 + ERVL LTR ERVL 2618 3265 -2389 358 397 22 24 chr10 10724580 10725116 -134864172 + ERVL LTR ERVL 3422 3956 -1808 585 362 60 29 chr10 10725165 10725660 -134863628 + ERVL LTR ERVL 4011 4562 -984 578 267 122 30 chr10 10725672 10726147 -134863141 - L1M4 LINE L1 -1305 4841 4323 2033 47 0 4 chr10 10726157 10726415 -134862873 + L1PA4 LINE L1 5897 6153 -2 253 316 116 11 chr10 10726504 10726779 -134862509 - L1M4 LINE L1 -2499 3647 3344 219 69 0 0 chr10 10726840 10726869 -134862419 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2157 104 3 0 chr10 10726872 10727160 -134862128 - AluSp SINE Alu -24 289 1 388 321 56 20 chr10 10728161 10728410 -134860878 - L1M4 LINE L1 -3642 2504 2247 343 304 171 6 chr10 10728562 10728743 -134860545 + MIR SINE MIR 3 213 -49 30 45 0 0 chr10 10728807 10728851 -134860437 + AT_rich Low_complexity Low_complexity 1 44 0 1141 263 116 28 chr10 10729270 10729779 -134859509 - L1ME2 LINE L1 -24 6209 5656 373 281 137 47 chr10 10729761 10730206 -134859082 - L1ME2 LINE L1 -2420 3795 3311 * 1283 248 44 33 chr10 10730197 10730695 -134858593 - L1ME2 LINE L1 -3375 2840 2349 3150 178 38 31 chr10 10730695 10730786 -134858502 - L1MA4 LINE L1 -3 6297 6208 2300 92 3 0 chr10 10730786 10731081 -134858207 - AluY SINE Alu -15 296 1 3150 178 38 31 chr10 10731081 10731625 -134857663 - L1MA4 LINE L1 -92 6208 5654 216 97 0 0 chr10 10731625 10731656 -134857632 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 3150 178 38 31 chr10 10731656 10731733 -134857555 - L1MA4 LINE L1 -646 5654 5579 1283 248 44 33 chr10 10731733 10731921 -134857367 - L1ME2 LINE L1 -3866 2349 2146 497 294 60 18 chr10 10732340 10732622 -134856666 - L1ME2 LINE L1 -5997 399 106 325 317 139 22 chr10 10733002 10733406 -134855882 - L1M4 LINE L1 -1667 4479 4029 191 291 156 81 chr10 10733562 10733857 -134855431 + L2 LINE L2 2915 3231 -41 248 0 31 0 chr10 10733950 10733982 -134855306 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 2334 87 0 0 chr10 10733984 10734273 -134855015 - AluSq SINE Alu -24 289 1 282 391 16 0 chr10 10734795 10734923 -134854365 + L2 LINE L2 2658 2787 -527 1032 73 0 0 chr10 10735097 10735220 -134854068 - AluSg SINE Alu -187 123 1 1092 194 83 24 chr10 10738671 10738923 -134850365 + AluJo SINE Alu 22 288 -24 213 65 0 0 chr10 10741230 10741261 -134848027 + (T)n Simple_repeat Simple_repeat 1 31 0 300 120 0 0 chr10 10741361 10741411 -134847877 + (T)n Simple_repeat Simple_repeat 1 50 0 198 406 31 8 chr10 10743959 10744087 -134845201 - L2 LINE L2 -4 3268 3138 2738 246 62 45 chr10 10744851 10746578 -134842710 - L1ME1 LINE L1 -41 6059 4300 7544 139 36 5 chr10 10746578 10747841 -134841447 - HSMAR2 DNA Mariner 0 1302 1 2738 246 62 45 chr10 10747841 10748273 -134841015 - L1ME1 LINE L1 -1800 4300 3877 1072 311 33 16 chr10 10748298 10748686 -134840602 - L1ME1 LINE L1 -2383 3697 3298 1339 142 0 45 chr10 10748686 10748932 -134840356 + MER46A DNA MER2_type 1 235 -1 1072 311 33 16 chr10 10748932 10749031 -134840257 - L1ME1 LINE L1 -2782 3298 3202 1436 246 116 69 chr10 10749056 10749622 -134839666 - MLT1E2 LTR MaLR -2 622 4 859 268 102 9 chr10 10749628 10750043 -134839245 - L1ME1 LINE L1 -3076 3004 2492 216 0 0 0 chr10 10750043 10750067 -134839221 + (TTTTG)n Simple_repeat Simple_repeat 1 24 0 859 268 102 9 chr10 10750067 10750275 -134839013 - L1ME1 LINE L1 -3588 2492 2305 374 249 190 32 chr10 10750280 10750501 -134838787 - L1ME1 LINE L1 -4341 1920 1665 1048 280 77 45 chr10 10750546 10751726 -134837562 - L1ME1 LINE L1 -4565 1515 311 1764 211 51 16 chr10 10751803 10752254 -134837034 + MLT1C LTR MaLR 1 467 0 207 358 9 46 chr10 10752503 10752612 -134836676 - MIR SINE MIR -81 127 23 348 302 47 23 chr10 10752776 10752905 -134836383 - L2 LINE L2 -238 3075 2944 950 153 12 24 chr10 10752922 10753092 -134836196 + BC200 scRNA scRNA 1 168 -32 686 208 159 23 chr10 10753163 10753414 -134835874 - MER58B DNA MER1_type 0 341 50 425 343 117 8 chr10 10753466 10753714 -134835574 - L2 LINE L2 -545 2769 2495 427 269 17 47 chr10 10756406 10756588 -134832700 + MER58C DNA MER1_type 38 212 -3 2247 114 0 0 chr10 10757932 10758230 -134831058 - AluSg SINE Alu -12 298 1 409 353 131 5 chr10 10758399 10758620 -134830668 + MIR SINE MIR 14 262 0 268 111 0 0 chr10 10758731 10758767 -134830521 + U2 snRNA snRNA 1 36 -152 198 376 24 0 chr10 10759292 10759377 -134829911 + MER5B DNA MER1_type 92 178 0 1052 128 0 0 chr10 10759687 10759828 -134829460 + AluSq SINE Alu 144 284 -29 244 318 255 21 chr10 10759880 10760166 -134829122 + L2 LINE L2 2961 3313 0 368 264 35 28 chr10 10761195 10761339 -134827949 + MER103 DNA DNA 7 151 -15 1966 208 37 52 chr10 10761371 10761936 -134827352 + MER74A LTR ERVL 1 619 -3 312 273 149 46 chr10 10761993 10762187 -134827101 + MIR SINE MIR 20 233 -29 614 149 0 40 chr10 10762630 10762805 -134826483 + (TC)n Simple_repeat Simple_repeat 1 168 0 2048 120 0 0 chr10 10762948 10763222 -134826066 - AluSx SINE Alu -38 274 1 1108 162 29 54 chr10 10765104 10765345 -134823943 - MER46A DNA MER2_type 0 236 2 386 344 58 11 chr10 10766895 10767084 -134822204 + MIR SINE MIR 36 233 -29 282 248 218 0 chr10 10767131 10767232 -134822056 - MIR SINE MIR -50 212 90 1082 38 0 0 chr10 10770935 10771066 -134818222 + L1PA5 LINE L1 6013 6143 -11 3079 152 42 17 chr10 10771099 10771327 -134817961 + L1MB3 LINE L1 5571 5792 -391 2069 132 36 41 chr10 10771327 10771692 -134817596 + THE1B LTR MaLR 1 363 -1 3079 152 42 17 chr10 10771692 10772061 -134817227 + L1MB3 LINE L1 5792 6183 0 2233 123 0 0 chr10 10772123 10772433 -134816855 - AluSx SINE Alu -2 310 1 255 125 54 0 chr10 10773606 10773662 -134815626 + AluS SINE Alu 14 72 -229 552 306 61 45 chr10 10773845 10774224 -134815064 - L2 LINE L2 -638 2676 2292 1967 131 31 0 chr10 10775012 10775303 -134813985 - AluSx SINE Alu -12 300 1 2084 120 0 0 chr10 10775541 10775815 -134813473 + AluSg SINE Alu 1 274 -36 4385 180 53 15 chr10 10776149 10776274 -134813014 - L1MD1 LINE L1 0 6636 6517 2292 113 48 17 chr10 10776274 10776627 -134812661 + THE1B LTR MaLR 1 364 0 4385 180 53 15 chr10 10776627 10777451 -134811837 - L1MD1 LINE L1 -119 6517 5651 6558 233 71 34 chr10 10777488 10782036 -134807252 - L1MD1 LINE L1 -1744 4796 1 345 62 0 0 chr10 10782212 10782260 -134807028 + (TG)n Simple_repeat Simple_repeat 2 49 0 2061 118 54 0 chr10 10782621 10782917 -134806371 - AluSx SINE Alu 0 312 1 312 27 0 0 chr10 10784616 10784653 -134804635 + (TG)n Simple_repeat Simple_repeat 2 38 0 2023 80 95 0 chr10 10784656 10784919 -134804369 - AluSg1 SINE Alu -21 288 1 1407 232 71 12 chr10 10785231 10785567 -134803721 + MLT1A1 LTR MaLR 10 365 0 195 42 0 0 chr10 10786481 10786505 -134802783 + (TTCA)n Simple_repeat Simple_repeat 4 27 0 937 305 94 12 chr10 10786505 10787061 -134802227 - L2 LINE L2 -14 3299 2698 199 158 18 18 chr10 10787061 10787073 -134802215 + (TA)n Simple_repeat Simple_repeat 1 12 -45 2022 137 0 10 chr10 10787073 10787380 -134801908 + AluSx SINE Alu 1 304 -8 199 158 18 18 chr10 10787380 10787424 -134801864 + (TA)n Simple_repeat Simple_repeat 11 57 0 636 250 107 14 chr10 10787554 10787770 -134801518 + MIR SINE MIR 2 237 -25 1920 112 3 31 chr10 10788407 10788701 -134800587 - AluSx SINE Alu -24 288 3 21 0 0 0 chr10 10791446 10791467 -134797821 + AT_rich Low_complexity Low_complexity 1 21 0 240 286 163 0 chr10 10791721 10791798 -134797490 + MIR SINE MIR 59 157 -105 640 190 52 17 chr10 10791798 10791972 -134797316 + MER104 DNA MER2_type 1 180 0 240 286 163 0 chr10 10791972 10791992 -134797296 + MIR SINE MIR 157 172 -90 211 286 0 0 chr10 10793296 10793338 -134795950 - MIR SINE MIR -206 56 15 245 302 34 23 chr10 10794359 10794489 -134794799 + MIR SINE MIR 11 144 -118 309 261 101 34 chr10 10797912 10798031 -134791257 - MER117 DNA MER1_type 0 197 71 2076 140 0 10 chr10 10798428 10798721 -134790567 - AluSq SINE Alu -23 290 1 218 315 167 9 chr10 10799514 10799622 -134789666 - L2 LINE L2 0 3272 3148 4265 176 48 23 chr10 10800875 10801119 -134788169 - L1MA7 LINE L1 -25 6266 6030 1126 142 117 0 chr10 10801119 10801324 -134787964 - MER30 DNA MER1_type 0 230 2 4265 176 48 23 chr10 10801324 10801965 -134787323 - L1MA7 LINE L1 -261 6030 5358 2122 121 0 17 chr10 10803017 10803314 -134785974 + AluSx SINE Alu 7 298 -14 203 348 33 11 chr10 10803830 10803922 -134785366 - MIR SINE MIR -90 118 25 198 0 0 0 chr10 10804009 10804031 -134785257 + (TG)n Simple_repeat Simple_repeat 1 22 0 2209 121 3 0 chr10 10805363 10805669 -134783619 + AluSg SINE Alu 1 307 -3 3437 139 38 0 chr10 10806010 10806544 -134782744 - MER41C LTR ERV1 0 554 1 217 106 43 43 chr10 10807273 10807320 -134781968 + MER5A DNA MER1_type 125 171 -18 219 324 45 36 chr10 10809499 10809610 -134779678 + MIR3 SINE MIR 5 116 -92 183 315 158 59 chr10 10809692 10810511 -134778777 - L2 LINE L2 -943 2371 1472 2001 236 19 49 chr10 10811017 10811395 -134777893 - LTR53 LTR ERVL 0 519 160 2313 87 0 13 chr10 10811395 10811704 -134777584 + AluSg1 SINE Alu 1 305 -4 2001 236 19 49 chr10 10811704 10811860 -134777428 - LTR53 LTR ERVL -359 160 1 2338 102 0 0 chr10 10811980 10812273 -134777015 - AluSc SINE Alu -14 295 3 582 221 206 51 chr10 10812647 10812971 -134776317 - LTR50 LTR ERVL -10 785 512 225 0 0 0 chr10 10812971 10812996 -134776292 + (CTG)n Simple_repeat Simple_repeat 2 26 0 582 221 206 51 chr10 10812996 10813275 -134776013 - LTR50 LTR ERVL -283 512 1 1560 290 49 38 chr10 10813373 10814025 -134775263 - MER115 DNA AcHobo 0 693 35 847 277 58 27 chr10 10814054 10814382 -134774906 - LTR33 LTR ERVL -183 338 1 575 80 0 0 chr10 10816864 10816939 -134772349 + AluY SINE Alu 5 79 -231 2061 71 0 8 chr10 10816964 10817218 -134772070 + AluY SINE Alu 48 299 -12 4484 118 9 2 chr10 10817265 10817895 -134771393 - MER41B LTR ERV1 0 635 1 503 291 81 14 chr10 10818104 10818314 -134770974 - MIR SINE MIR -34 228 5 2140 188 36 81 chr10 10818345 10818929 -134770359 - MER89 LTR ERV1 -1 558 1 353 123 0 4 chr10 10819522 10819740 -134769548 + AluSq SINE Alu 1 306 0 197 315 82 0 chr10 10820346 10820419 -134768869 + MIR SINE MIR 47 125 -83 201 167 0 24 chr10 10821625 10821667 -134767621 + (CA)n Simple_repeat Simple_repeat 2 42 0 2181 118 0 0 chr10 10822782 10823071 -134766217 + AluSx SINE Alu 1 289 -23 183 42 0 0 chr10 10823627 10823651 -134765637 + (GA)n Simple_repeat Simple_repeat 2 25 0 * 342 0 0 0 chr10 10823650 10823688 -134765600 + (TG)n Simple_repeat Simple_repeat 2 39 0 514 289 12 12 chr10 10824026 10824199 -134765089 + MIR3 SINE MIR 20 192 -16 316 327 19 0 chr10 10824985 10825092 -134764196 + MIR SINE MIR 53 161 -101 2110 159 31 29 chr10 10825113 10825233 -134764055 - MLT1B LTR MaLR -3 387 269 2278 120 0 0 chr10 10825233 10825541 -134763747 - AluSx SINE Alu -4 308 1 2110 159 31 29 chr10 10825541 10825804 -134763484 - MLT1B LTR MaLR -121 269 3 235 250 62 70 chr10 10825808 10825936 -134763352 - LTR16A LTR ERVL -10 440 314 2607 131 20 43 chr10 10825948 10826352 -134762936 - Tigger2a DNA MER2_type -2274 434 39 2793 150 16 30 chr10 10826352 10826659 -134762629 - LTR45B LTR ERV1 0 489 190 2398 84 3 0 chr10 10826659 10826955 -134762333 - AluSp SINE Alu -16 297 1 2793 150 16 30 chr10 10826955 10827139 -134762149 - LTR45B LTR ERV1 -299 190 5 2607 131 20 43 chr10 10827139 10827178 -134762110 - Tigger2a DNA MER2_type -2669 39 1 490 278 111 48 chr10 10827178 10827446 -134761842 - LTR16A LTR ERVL -147 303 19 1398 186 26 89 chr10 10828759 10828977 -134760311 - MLT1A2 LTR MaLR -16 358 173 2094 109 63 29 chr10 10828977 10829327 -134759961 - THE1B LTR MaLR 0 364 3 1398 186 26 89 chr10 10829327 10829490 -134759798 - MLT1A2 LTR MaLR -201 173 1 202 192 39 0 chr10 10829501 10829553 -134759735 + (CAGAGA)n Simple_repeat Simple_repeat 4 57 0 397 299 119 44 chr10 10829581 10830196 -134759092 - L2 LINE L2 -223 3090 2425 584 269 218 18 chr10 10830322 10830716 -134758572 + LTR33A LTR ERVL 2 474 -49 207 184 0 0 chr10 10831679 10831717 -134757571 + (CA)n Simple_repeat Simple_repeat 2 39 0 17461 34 1 1 chr10 10831993 10834826 -134754462 - L1PA2 LINE L1 -4 6151 3319 901 171 124 16 chr10 10834826 10835083 -134754205 + MER33 DNA MER1_type 30 314 -10 388 290 183 0 chr10 10835259 10835438 -134753850 + MIR SINE MIR 31 244 -18 4047 119 17 12 chr10 10836488 10837128 -134752160 + L1PB1 LINE L1 5506 6148 -3 518 254 141 39 chr10 10837356 10837612 -134751676 - L2 LINE L2 -1 3312 3031 386 200 14 0 chr10 10837612 10837682 -134751606 - AluS SINE Alu -237 71 1 390 287 125 23 chr10 10838320 10838536 -134750752 - MIR SINE MIR -2 260 23 262 234 0 16 chr10 10838661 10838725 -134750563 + CT-rich Low_complexity Low_complexity 1 63 0 750 131 0 0 chr10 10839287 10839394 -134749894 + AluSq/x SINE Alu 3 109 -203 528 70 0 0 chr10 10839494 10839565 -134749723 - Alu SINE Alu -238 72 2 2421 53 0 50 chr10 10839566 10839887 -134749401 - AluY SINE Alu -6 305 1 463 191 11 11 chr10 10839943 10840037 -134749251 - MER58A DNA MER1_type 0 224 131 928 66 0 59 chr10 10840037 10840173 -134749115 - AluSg/x SINE Alu -10 302 175 371 182 0 0 chr10 10840193 10840255 -134749033 - AluSp SINE Alu -104 199 138 701 220 38 0 chr10 10840255 10840387 -134748901 - MER58A DNA MER1_type 0 141 5 227 377 49 0 chr10 10841151 10841193 -134748095 - L2 LINE L2 -9 3263 3225 2398 208 28 73 chr10 10841193 10841834 -134747454 + LTR9 LTR ERV1 1 612 0 227 377 49 0 chr10 10841834 10841913 -134747375 - L2 LINE L2 -47 3225 3136 329 328 140 29 chr10 10842111 10842553 -134746735 - L2 LINE L2 -367 2947 2457 216 349 0 0 chr10 10842987 10843073 -134746215 + L2 LINE L2 2652 2737 -577 360 270 178 11 chr10 10843073 10843258 -134746030 + MIR SINE MIR 47 262 0 1223 142 0 0 chr10 10843455 10843624 -134745664 + AluJo SINE Alu 5 173 -139 871 161 0 22 chr10 10843626 10843763 -134745525 + AluJo/FRAM SINE Alu 142 275 -37 225 0 0 0 chr10 10843763 10843788 -134745500 + (TC)n Simple_repeat Simple_repeat 1 25 0 * 384 22 0 0 chr10 10843787 10843832 -134745456 + (CA)n Simple_repeat Simple_repeat 1 45 0 333 0 0 0 chr10 10844175 10844212 -134745076 + (CA)n Simple_repeat Simple_repeat 1 37 0 2722 219 28 40 chr10 10844260 10844611 -134744677 + MER82 DNA MER2_type 2 343 -310 2209 125 146 11 chr10 10844611 10844988 -134744300 - MSTA LTR MaLR 0 428 1 2722 219 28 40 chr10 10844988 10845290 -134743998 + MER82 DNA MER2_type 343 647 -6 197 282 59 106 chr10 10851220 10851390 -134737898 + MIR3 SINE MIR 9 170 -38 288 0 0 0 chr10 10852346 10852378 -134736910 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 1656 133 12 8 chr10 10852381 10852621 -134736667 - AluSq SINE Alu -33 280 40 554 104 0 0 chr10 10852622 10852699 -134736589 - AluJ/FLAM SINE Alu -235 77 1 23 54 0 0 chr10 10853745 10853782 -134735506 + AT_rich Low_complexity Low_complexity 1 37 0 24 0 0 0 chr10 10854079 10854103 -134735185 + AT_rich Low_complexity Low_complexity 1 24 0 4028 77 2 0 chr10 10855077 10855610 -134733678 - L1PA10 LINE L1 -16 6152 5619 1727 172 10 3 chr10 10856283 10856579 -134732709 - AluSq SINE Alu -13 300 3 267 31 0 0 chr10 10856697 10856729 -134732559 + (TG)n Simple_repeat Simple_repeat 2 33 0 22 35 0 0 chr10 10857802 10857831 -134731457 + AT_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr10 10857870 10857895 -134731393 + AT_rich Low_complexity Low_complexity 1 25 0 3694 65 18 0 chr10 10858289 10858779 -134730509 + L1PA10 LINE L1 5670 6168 0 744 275 35 5 chr10 10859558 10859758 -134729530 + MIR SINE MIR 30 235 -27 2529 68 0 0 chr10 10860519 10860828 -134728460 + AluY SINE Alu 1 309 -2 491 371 33 4 chr10 10861122 10861367 -134727921 - MIR SINE MIR -10 252 1 2262 82 30 0 chr10 10861498 10861801 -134727487 + AluSx SINE Alu 1 312 0 27 29 0 0 chr10 10862618 10862652 -134726636 + AT_rich Low_complexity Low_complexity 1 34 0 793 156 87 50 chr10 10864420 10864638 -134724650 - MER66A LTR ERV1 0 478 253 1330 152 0 5 chr10 10864641 10864839 -134724449 - AluSg/x SINE Alu -17 295 99 1297 224 0 8 chr10 10864839 10865107 -134724181 - MER66B LTR ERV1 -220 266 1 385 366 54 16 chr10 10866197 10866514 -134722774 + L2 LINE L2 2323 2651 -663 620 303 0 27 chr10 10866597 10866782 -134722506 - MIR SINE MIR -52 210 31 283 278 14 0 chr10 10867113 10867185 -134722103 + MLT1H LTR MaLR 228 300 -249 423 183 86 0 chr10 10867280 10867373 -134721915 + MLT1H LTR MaLR 446 546 -3 366 269 93 116 chr10 10867380 10867829 -134721459 + L2 LINE L2 2832 3270 -2 449 295 137 30 chr10 10868950 10869615 -134719673 - L1ME4a LINE L1 -2 6119 5384 217 326 31 10 chr10 10869773 10869871 -134719417 - MER5B DNA MER1_type -78 100 1 331 320 20 48 chr10 10870683 10870830 -134718458 + MIR3 SINE MIR 4 146 -62 188 315 22 22 chr10 10870880 10870972 -134718316 + MIR SINE MIR 60 151 -111 2996 137 79 57 chr10 10871019 10871616 -134717672 + MER4B LTR ERV1 1 610 0 208 309 12 12 chr10 10872143 10872224 -134717064 - MIR SINE MIR -84 124 44 420 257 51 25 chr10 10873686 10873839 -134715449 - MER5A DNA MER1_type -3 175 5 318 321 93 21 chr10 10873704 10873844 -134715444 + MER5A DNA MER1_type 40 189 0 * 198 288 34 34 chr10 10875460 10875519 -134713769 + L3b LINE CR1 1514 1572 -11 726 217 35 25 chr10 10875629 10875832 -134713456 - MER3 DNA MER1_type 0 209 5 196 329 27 14 chr10 10875868 10875941 -134713347 - MER5A DNA MER1_type -112 77 4 2687 128 12 2 chr10 10875945 10876375 -134712913 + MER57B LTR ERV1 1 434 0 292 359 77 21 chr10 10876539 10876773 -134712515 - L3 LINE CR1 -15 1562 1316 699 300 53 50 chr10 10877395 10877718 -134711570 - L3 LINE CR1 -288 1289 966 203 309 12 12 chr10 10878058 10878139 -134711149 + MIR3 SINE MIR 125 205 -3 2203 111 0 0 chr10 10878529 10878817 -134710471 - AluSg SINE Alu -22 288 1 503 283 18 0 chr10 10879902 10880062 -134709226 - MIR3 SINE MIR -3 205 41 198 118 0 0 chr10 10880684 10880718 -134708570 + (TG)n Simple_repeat Simple_repeat 2 35 0 7282 24 22 1 chr10 10882024 10883200 -134706088 + L1PA4 LINE L1 4975 6168 0 2137 125 0 25 chr10 10885547 10885868 -134703420 + AluSq SINE Alu 1 313 0 22 0 0 0 chr10 10886644 10886666 -134702622 + AT_rich Low_complexity Low_complexity 1 22 0 6488 72 14 14 chr10 10887143 10888225 -134701063 + L1PA10 LINE L1 5080 6168 0 272 333 25 68 chr10 10888910 10889147 -134700141 + L2 LINE L2 886 1112 -2202 432 318 41 30 chr10 10889534 10889962 -134699326 - L1MEd LINE L1 -992 1498 974 30 77 0 0 chr10 10889988 10890053 -134699235 + AT_rich Low_complexity Low_complexity 1 65 0 2027 158 0 50 chr10 10891099 10891479 -134697809 + THE1B LTR MaLR 1 361 -3 494 369 77 14 chr10 10892105 10892455 -134696833 + L2 LINE L2 1215 1586 -1728 440 274 152 20 chr10 10892461 10892658 -134696630 - MER58A DNA MER1_type -1 223 1 419 265 118 38 chr10 10892875 10893113 -134696175 + L2 LINE L2 3057 3313 0 459 277 133 6 chr10 10893145 10893311 -134695977 + LTR16A LTR ERVL 16 202 -248 750 268 19 48 chr10 10893371 10893640 -134695648 + LTR16A LTR ERVL 190 450 0 2139 16 0 0 chr10 10894340 10894585 -134694703 + L1PA2 LINE L1 5909 6153 -2 512 284 106 23 chr10 10895903 10896121 -134693167 + MIR SINE MIR 15 250 -12 570 29 0 0 chr10 10896295 10896363 -134692925 + (TG)n Simple_repeat Simple_repeat 2 69 0 184 309 29 15 chr10 10897314 10897382 -134691906 - MIR3 SINE MIR -45 163 95 850 142 0 0 chr10 10897998 10898118 -134691170 + AluJ SINE Alu 1 120 -192 232 271 0 0 chr10 10898118 10898166 -134691122 + (TATATG)n Simple_repeat Simple_repeat 5 52 0 934 213 0 0 chr10 10898173 10898347 -134690941 + AluJ SINE Alu 130 303 -9 2376 46 40 16 chr10 10898483 10898787 -134690501 + AluY SINE Alu 1 311 0 636 297 74 13 chr10 10899405 10899634 -134689654 - MIR SINE MIR -11 251 9 256 198 22 110 chr10 10901022 10901113 -134688175 - MIR SINE MIR -57 205 123 2182 114 0 3 chr10 10903726 10904023 -134685265 - AluSx SINE Alu -16 296 1 210 399 34 11 chr10 10904191 10904369 -134684919 - MIR SINE MIR -12 250 69 1407 56 1 1 chr10 10904379 10904567 -134684721 - L1PA6 LINE L1 -291 5863 5698 757 47 0 47 chr10 10904567 10904667 -134684621 + L1PA5 LINE L1 6053 6153 -1 249 33 0 0 chr10 10905681 10905711 -134683577 + (A)n Simple_repeat Simple_repeat 1 30 0 275 310 80 0 chr10 10907756 10907869 -134681419 + MIR SINE MIR 121 242 -20 261 98 0 0 chr10 10908237 10908278 -134681010 + (CA)n Simple_repeat Simple_repeat 1 41 0 802 274 83 76 chr10 10908720 10909348 -134679940 - L1MC4a LINE L1 -1909 5899 5268 31 68 0 0 chr10 10909626 10909685 -134679603 + AT_rich Low_complexity Low_complexity 1 59 0 482 333 50 20 chr10 10909922 10910219 -134679069 - L1MC4a LINE L1 -1537 4609 4304 440 286 63 80 chr10 10910397 10910472 -134678816 - MLT1I LTR MaLR -6 403 328 1667 93 0 9 chr10 10910472 10910698 -134678590 - AluSc SINE Alu -3 306 83 440 286 63 80 chr10 10910698 10910985 -134678303 - MLT1I LTR MaLR -81 328 47 312 137 0 0 chr10 10914165 10914216 -134675072 + (TTCA)n Simple_repeat Simple_repeat 4 54 0 260 368 65 65 chr10 10915782 10916092 -134673196 + L2 LINE L2 2949 3258 -14 251 291 83 126 chr10 10916129 10916503 -134672785 + L2 LINE L2 2915 3272 0 182 299 184 23 chr10 10917038 10917125 -134672163 + MIR SINE MIR 47 147 -115 2133 119 0 25 chr10 10917250 10917568 -134671720 - AluSq SINE Alu -3 310 1 2746 124 3 0 chr10 10919027 10919390 -134669898 + THE1B LTR MaLR 1 364 0 270 56 0 0 chr10 10920212 10920248 -134669040 + (TG)n Simple_repeat Simple_repeat 2 37 0 1905 164 0 3 chr10 10921192 10921491 -134667797 + AluJo SINE Alu 3 300 -12 309 311 57 0 chr10 10921508 10921614 -134667674 + L2 LINE L2 3151 3262 -10 186 237 26 0 chr10 10922672 10922710 -134666578 - MIR SINE MIR -76 132 94 212 274 39 49 chr10 10923004 10923106 -134666182 + L2 LINE L2 2949 3049 -223 208 241 51 51 chr10 10923988 10924067 -134665221 + L2 LINE L2 2095 2173 -1141 1268 188 4 8 chr10 10926434 10926673 -134662615 + L1MB7 LINE L1 5431 5668 -516 43397 35 23 2 chr10 10926677 10932704 -134656584 + L1PA2 LINE L1 1 6155 0 1725 216 44 33 chr10 10932745 10933195 -134656093 + L1MB7 LINE L1 5652 6106 -78 383 98 0 0 chr10 10933224 10933275 -134656013 - MADE1 DNA Mariner -28 52 2 350 132 0 0 chr10 10933277 10933330 -134655958 + L1MB8 LINE L1 6120 6172 -6 337 298 71 89 chr10 10933347 10933629 -134655659 + L1ME3A LINE L1 5811 6087 -83 923 180 40 110 chr10 10935653 10935953 -134653335 + MLT1D LTR MaLR 82 360 -145 207 321 83 0 chr10 10936079 10936163 -134653125 - MIR SINE MIR -82 180 90 2048 213 68 41 chr10 10936854 10937416 -134651872 - L1ME2 LINE L1 -1 6163 5585 1016 214 77 114 chr10 10937532 10937989 -134651299 - LTR16A1 LTR ERVL -14 443 4 250 238 24 12 chr10 10941164 10941248 -134648040 + (TA)n Simple_repeat Simple_repeat 1 85 0 2894 10 0 0 chr10 10942400 10942711 -134646577 + AluY SINE Alu 1 311 0 241 185 19 19 chr10 10942763 10942817 -134646471 + (CA)n Simple_repeat Simple_repeat 1 54 0 348 253 140 7 chr10 10943963 10944113 -134645175 - L1ME1 LINE L1 -4 6162 5993 2030 147 7 0 chr10 10944495 10944795 -134644493 + AluSx SINE Alu 1 302 -10 218 349 8 39 chr10 10944984 10945113 -134644175 + MIR SINE MIR 79 203 -59 2222 113 3 0 chr10 10945719 10946021 -134643267 - AluSp SINE Alu -10 303 1 5331 183 27 62 chr10 10946246 10946708 -134642580 - L1MC1 LINE L1 -9 6604 6127 1774 193 10 0 chr10 10946708 10947013 -134642275 + AluJb SINE Alu 3 310 -2 5331 183 27 62 chr10 10947013 10947550 -134641738 - L1MC1 LINE L1 -486 6127 5573 2105 137 0 7 chr10 10947550 10947849 -134641439 - AluSx SINE Alu -15 297 1 5331 183 27 62 chr10 10947849 10949184 -134640104 - L1MC1 LINE L1 -1040 5573 4346 8837 189 71 50 chr10 10949184 10952686 -134636602 - L1MC1 LINE L1 -2824 3602 28 401 322 27 27 chr10 10953257 10953440 -134635848 + MER5A DNA MER1_type 3 185 -4 2189 129 0 0 chr10 10955100 10955409 -134633879 - AluSx SINE Alu -3 309 1 401 196 144 26 chr10 10955522 10955675 -134633613 - Charlie2 DNA MER1_type -147 2715 2545 435 83 0 0 chr10 10955951 10956011 -134633277 + (TATG)n Simple_repeat Simple_repeat 3 62 0 244 196 22 0 chr10 10956049 10956095 -134633193 - MER21A LTR ERV1 -203 728 682 * 1920 251 32 18 chr10 10956069 10956629 -134632659 - MER77 LTR ERV1 -7 598 56 1322 231 40 6 chr10 10957207 10957536 -134631752 - MER58B DNA MER1_type 0 341 2 1730 173 3 7 chr10 10960280 10960581 -134628707 + AluJb SINE Alu 1 300 -12 1959 151 47 16 chr10 10962280 10962644 -134626644 + THE1C LTR MaLR 1 375 0 1535 181 27 34 chr10 10964545 10964838 -134624450 + AluJo SINE Alu 1 291 -21 1849 158 137 11 chr10 10964910 10965290 -134623998 - MSTA LTR MaLR 0 428 1 187 268 71 93 chr10 10966348 10966417 -134622871 + MIR SINE MIR 2 71 -191 1982 145 7 3 chr10 10966417 10966713 -134622575 + AluSx SINE Alu 1 297 -15 187 268 71 93 chr10 10966713 10966826 -134622462 + MIR SINE MIR 71 180 -82 40283 34 26 2 chr10 10966826 10972818 -134616470 - L1PA3 LINE L1 -1 6154 12 1405 185 13 75 chr10 10973287 10973617 -134615671 - MLT1A1 LTR MaLR 0 365 61 1680 138 0 23 chr10 10973617 10973877 -134615411 - AluSx SINE Alu -22 290 37 1405 185 13 75 chr10 10973877 10973935 -134615353 - MLT1A1 LTR MaLR -304 61 1 219 360 13 39 chr10 10974135 10974288 -134615000 + MIR SINE MIR 84 232 -30 257 262 40 13 chr10 10974746 10974895 -134614393 + (TA)n Simple_repeat Simple_repeat 2 154 0 222 287 267 32 chr10 10975439 10975690 -134613598 - L2 LINE L2 -338 2976 2667 244 336 36 22 chr10 10976184 10976461 -134612827 + MER34 LTR ERV1 1 281 -261 242 298 68 48 chr10 10976473 10976725 -134612563 + MER34 LTR ERV1 257 513 -29 2016 137 0 3 chr10 10978418 10978703 -134610585 - AluSg SINE Alu -26 284 1 630 299 74 17 chr10 10978968 10979199 -134610089 - MIR SINE MIR 0 262 19 356 200 89 22 chr10 10979387 10979477 -134609811 + MER5B DNA MER1_type 80 175 -3 21 0 0 0 chr10 10980342 10980363 -134608925 + AT_rich Low_complexity Low_complexity 1 21 0 1511 211 10 0 chr10 10980728 10981017 -134608271 + AluJo SINE Alu 3 294 -18 21 0 0 0 chr10 10981182 10981203 -134608085 + AT_rich Low_complexity Low_complexity 1 21 0 391 317 8 24 chr10 10982498 10982621 -134606667 - MIR3 SINE MIR -75 133 13 560 333 68 24 chr10 10983254 10983548 -134605740 + L3 LINE CR1 1233 1539 -38 285 278 113 0 chr10 10984060 10984157 -134605131 - MIR3 SINE MIR -6 202 95 195 139 0 0 chr10 10984669 10984705 -134604583 + (CA)n Simple_repeat Simple_repeat 2 37 0 543 190 65 65 chr10 10986808 10986992 -134602296 - MER20 DNA MER1_type 0 219 36 2200 130 0 0 chr10 10987422 10987721 -134601567 + AluSx SINE Alu 4 302 -10 234 0 0 0 chr10 10987967 10987993 -134601295 + (A)n Simple_repeat Simple_repeat 1 26 0 651 315 245 20 chr10 10988134 10989228 -134600060 + L2 LINE L2 1945 3299 -14 2172 138 0 0 chr10 10989572 10989877 -134599411 + AluSx SINE Alu 1 305 -7 1873 157 17 0 chr10 10992083 10992377 -134596911 + AluJb SINE Alu 1 299 -13 21 0 0 0 chr10 10993321 10993342 -134595946 + AT_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr10 10993731 10993759 -134595529 + AT_rich Low_complexity Low_complexity 1 28 0 2381 92 0 0 chr10 10994161 10994464 -134594824 + AluSx SINE Alu 1 303 -9 1873 112 105 4 chr10 10994800 10995077 -134594211 - AluSg SINE Alu -5 305 1 1485 194 0 37 chr10 10995088 10995387 -134593901 - AluJo SINE Alu -24 288 1 596 250 127 42 chr10 10995460 10995672 -134593616 + MIR SINE MIR 30 259 -3 240 210 81 0 chr10 10995999 10996061 -134593227 + MIR SINE MIR 128 194 -68 21 57 0 0 chr10 10997408 10997443 -134591845 + AT_rich Low_complexity Low_complexity 1 35 0 1674 154 9 49 chr10 10997840 10998164 -134591124 + AluJo SINE Alu 1 311 -1 243 268 0 0 chr10 11000065 11000121 -134589167 + MIR SINE MIR 92 147 -61 276 122 20 20 chr10 11000150 11000199 -134589089 + AluSp SINE Alu 120 168 -135 2225 116 0 7 chr10 11000199 11000502 -134588786 + AluSg SINE Alu 7 307 -3 240 356 25 8 chr10 11001398 11001516 -134587772 + MIR3 SINE MIR 9 128 -80 29 0 0 0 chr10 11001641 11001670 -134587618 + AT_rich Low_complexity Low_complexity 1 29 0 1453 239 46 19 chr10 11002080 11002449 -134586839 - L1MDa LINE L1 -6127 413 35 2389 139 89 5 chr10 11002617 11003012 -134586276 - MSTA LTR MaLR 0 428 1 2464 84 0 0 chr10 11003314 11003625 -134585663 + AluY SINE Alu 1 311 0 245 310 160 72 chr10 11003695 11003977 -134585311 - L2 LINE L2 -2 3270 2953 2222 101 0 47 chr10 11003977 11004294 -134584994 + AluSg SINE Alu 1 302 -8 245 310 160 72 chr10 11004294 11004343 -134584945 - L2 LINE L2 -319 2953 2910 1166 149 19 37 chr10 11005394 11005608 -134583680 + AluSg/x SINE Alu 83 292 -18 2309 115 0 0 chr10 11006014 11006318 -134582970 + AluSx SINE Alu 1 304 -8 395 335 88 16 chr10 11006473 11006792 -134582496 + MLT1I LTR MaLR 18 359 -50 288 0 0 0 chr10 11007063 11007095 -134582193 + (CA)n Simple_repeat Simple_repeat 2 33 0 530 259 114 34 chr10 11008037 11008300 -134580988 + LTR43 LTR ERV1 187 470 -132 2370 99 0 0 chr10 11008340 11008643 -134580645 - AluSx SINE Alu -9 303 1 2154 145 34 26 chr10 11009334 11009673 -134579615 - THE1B LTR MaLR 0 364 23 1298 199 116 47 chr10 11009673 11010161 -134579127 - MER69 DNA AcHobo -2 2524 2010 * 1357 304 74 30 chr10 11010159 11010593 -134578695 - MER69 DNA AcHobo -658 568 104 480 268 9 0 chr10 11010593 11010705 -134578583 - MER81 DNA DNA 0 114 2 1357 304 74 30 chr10 11010705 11010813 -134578475 - MER69 DNA AcHobo -1122 104 2 186 263 140 26 chr10 11011516 11011630 -134577658 - L3b LINE CR1 -235 1348 1222 407 281 23 23 chr10 11011793 11011921 -134577367 + MIR3 SINE MIR 66 193 -15 419 51 0 17 chr10 11012171 11012230 -134577058 + (TTTC)n Simple_repeat Simple_repeat 3 60 0 273 169 0 0 chr10 11012385 11012444 -134576844 + (TTTG)n Simple_repeat Simple_repeat 2 60 0 21 57 0 0 chr10 11012800 11012835 -134576453 + AT_rich Low_complexity Low_complexity 1 35 0 208 338 12 0 chr10 11013681 11013761 -134575527 + L2 LINE L2 2709 2789 -525 342 336 64 49 chr10 11013828 11014155 -134575133 + L1ME4a LINE L1 5501 5832 -289 * 1139 220 17 9 chr10 11014147 11014379 -134574909 + L1MC3 LINE L1 7137 7370 -415 333 141 172 0 chr10 11014381 11014445 -134574843 - L1MA9 LINE L1 0 6312 6238 1348 167 26 0 chr10 11014446 11014679 -134574609 + L1MC3 LINE L1 7356 7594 -191 924 165 71 6 chr10 11014680 11014862 -134574426 + L1MC2 LINE L1 6138 6331 -13 207 232 18 0 chr10 11014974 11015030 -134574258 + (TA)n Simple_repeat Simple_repeat 1 57 0 1607 195 15 9 chr10 11015262 11015590 -134573698 - L1MD3 LINE L1 -13 7982 7653 * 2323 153 17 85 chr10 11015587 11016210 -134573078 - L1M2 LINE L1 -745 5401 4885 * 3522 193 24 46 chr10 11016207 11017026 -134572262 + L1MA9 LINE L1 5474 6274 -38 2195 79 59 0 chr10 11017050 11017340 -134571948 + AluSc SINE Alu 1 307 -2 2137 195 95 21 chr10 11017340 11017899 -134571389 - L1MC4a LINE L1 -318 7490 6891 1028 188 41 10 chr10 11017912 11018109 -134571179 + MER6B DNA MER2_type 8 210 0 1082 212 0 0 chr10 11018170 11018363 -134570925 + AluJo SINE Alu 5 197 -115 264 271 112 28 chr10 11018825 11018932 -134570356 - L2 LINE L2 0 3272 3157 195 69 0 0 chr10 11020933 11020962 -134568326 + (A)n Simple_repeat Simple_repeat 1 29 0 402 315 30 56 chr10 11023065 11023262 -134566026 - L2 LINE L2 -4 3309 3118 1449 78 0 21 chr10 11023540 11023731 -134565557 - AluY SINE Alu -26 285 99 2483 125 26 24 chr10 11023783 11024198 -134565090 + L1MA4A LINE L1 5885 6300 -3 497 269 121 70 chr10 11024231 11024286 -134565002 - L2 LINE L2 -574 2740 2689 2362 107 0 0 chr10 11024286 11024596 -134564692 + AluY SINE Alu 1 310 -1 497 269 121 70 chr10 11024596 11024986 -134564302 - L2 LINE L2 -625 2689 2272 671 266 93 8 chr10 11025317 11025670 -134563618 + L1ME4a LINE L1 5710 6092 -29 2325 109 0 0 chr10 11025821 11026124 -134563164 + AluSc SINE Alu 1 303 -6 215 262 16 16 chr10 11026278 11026339 -134562949 - MIR SINE MIR -5 257 197 2411 94 0 3 chr10 11028228 11028537 -134560751 + AluSc SINE Alu 1 308 -1 207 0 0 0 chr10 11028622 11028645 -134560643 + (A)n Simple_repeat Simple_repeat 1 23 0 507 249 57 11 chr10 11028807 11028984 -134560304 - MER112 DNA MER1_type -6 254 70 279 0 0 0 chr10 11029119 11029150 -134560138 + (TG)n Simple_repeat Simple_repeat 2 32 0 216 0 0 0 chr10 11029881 11029905 -134559383 + (T)n Simple_repeat Simple_repeat 1 24 0 1692 189 0 23 chr10 11029963 11030265 -134559023 - AluJo SINE Alu -11 301 7 311 269 110 39 chr10 11031156 11031489 -134557799 - MLT1K LTR MaLR -2 597 252 239 192 13 64 chr10 11032107 11032185 -134557103 + HSMAR1 DNA Mariner 1214 1287 0 2327 110 0 0 chr10 11032681 11032990 -134556298 + AluSg SINE Alu 1 309 -1 1413 188 4 4 chr10 11032995 11033245 -134556043 + AluJo SINE Alu 1 250 -62 188 32 97 0 chr10 11033268 11033299 -134555989 + A-rich Low_complexity Low_complexity 4 37 0 2159 131 3 0 chr10 11035116 11035428 -134553860 - AluSq SINE Alu 0 313 1 2143 118 7 0 chr10 11035726 11036023 -134553265 - AluSq SINE Alu -14 299 1 753 337 57 37 chr10 11036470 11037237 -134552051 - L2 LINE L2 -213 3059 2276 2297 203 17 53 chr10 11037248 11037725 -134551563 + MLT2B1 LTR ERVL 1 459 -61 450 0 0 0 chr10 11037725 11037775 -134551513 + (TG)n Simple_repeat Simple_repeat 2 51 0 2297 203 17 53 chr10 11037775 11037829 -134551459 + MLT2B1 LTR ERVL 459 513 -7 600 319 124 9 chr10 11037853 11038298 -134550990 - L2 LINE L2 -1069 2245 1750 892 152 0 0 chr10 11038579 11038711 -134550577 + FLAM_C SINE Alu 1 132 -11 371 125 0 0 chr10 11038716 11038772 -134550516 + Alu SINE Alu 239 294 -6 315 243 76 35 chr10 11040718 11040883 -134548405 - LTR16A1 LTR ERVL 0 479 323 1256 321 56 39 chr10 11042223 11042990 -134546298 - ERVL LTR ERVL -1313 4451 3672 216 135 0 0 chr10 11043027 11043064 -134546224 + (CCA)n Simple_repeat Simple_repeat 1 37 0 27 0 0 0 chr10 11043282 11043309 -134545979 + AT_rich Low_complexity Low_complexity 1 27 0 2766 20 0 0 chr10 11043534 11043836 -134545452 + AluY SINE Alu 1 302 -9 1352 81 0 0 chr10 11043836 11044009 -134545279 + AluY SINE Alu 133 305 -6 2079 141 3 0 chr10 11044381 11044693 -134544595 - AluSq SINE Alu 0 313 1 232 398 59 0 chr10 11044930 11045048 -134544240 - L2 LINE L2 -11 3261 3137 436 325 73 73 chr10 11045236 11045300 -134543988 - L2 LINE L2 -481 2833 2770 2194 104 0 3 chr10 11045300 11045612 -134543676 + AluSx SINE Alu 1 311 0 436 325 73 73 chr10 11045612 11046069 -134543219 - L2 LINE L2 -543 2771 2311 652 62 0 0 chr10 11046069 11046149 -134543139 + AluSg/x SINE Alu 199 278 -32 216 0 0 0 chr10 11046149 11046173 -134543115 + (CAAT)n Simple_repeat Simple_repeat 4 27 0 293 365 29 22 chr10 11046689 11046826 -134542462 - MER5A DNA MER1_type 0 189 52 225 259 192 52 chr10 11047032 11047225 -134542063 + MLT1K LTR MaLR 186 405 -183 2140 127 22 60 chr10 11047296 11047665 -134541623 + THE1A LTR MaLR 1 355 0 230 219 0 0 chr10 11047714 11047755 -134541533 + MLT1K LTR MaLR 548 588 0 283 327 58 10 chr10 11048063 11048167 -134541121 + MIR SINE MIR 35 143 -65 310 241 113 44 chr10 11049433 11049557 -134539731 + MER5B DNA MER1_type 2 137 -52 458 286 35 105 chr10 11049967 11050163 -134539125 - L2 LINE L2 -15 3298 3090 2647 129 48 12 chr10 11050163 11050575 -134538713 + MSTA LTR MaLR 2 428 0 458 286 35 105 chr10 11050575 11050689 -134538599 - L2 LINE L2 -223 3090 2969 2137 128 7 0 chr10 11050689 11050995 -134538293 - AluSx SINE Alu -3 309 2 458 286 35 105 chr10 11050995 11051168 -134538120 - L2 LINE L2 -344 2969 2879 1715 155 61 0 chr10 11051168 11051446 -134537842 + AluSx SINE Alu 1 295 -17 458 286 35 105 chr10 11051446 11051636 -134537652 - L2 LINE L2 -434 2879 2677 460 328 97 43 chr10 11052775 11053816 -134535472 + L2 LINE L2 1966 3042 -230 192 229 66 0 chr10 11054676 11054737 -134534551 - L2 LINE L2 -203 3069 3005 255 227 0 30 chr10 11055293 11055359 -134533929 + CT-rich Low_complexity Low_complexity 6 69 0 509 286 34 51 chr10 11055430 11055608 -134533680 - MER5B DNA MER1_type -1 177 3 2165 104 0 0 chr10 11056274 11056597 -134532691 - AluSc SINE Alu 0 324 2 1905 151 91 0 chr10 11056968 11057154 -134532134 + MER7A DNA MER2_type 1 169 -2869 2809 107 0 6 chr10 11057154 11057520 -134531768 - THE1B LTR MaLR 0 364 1 1905 151 91 0 chr10 11057520 11057652 -134531636 + MER7A DNA MER2_type 169 346 0 1317 199 92 40 chr10 11057656 11057983 -134531305 - MER2 DNA MER2_type 0 344 1 1762 178 108 52 chr10 11057983 11058427 -134530861 - MLT2B1 LTR ERVL -51 469 1 1817 180 80 42 chr10 11058967 11059417 -134529871 + MLT1C LTR MaLR 1 467 0 2169 118 3 13 chr10 11059524 11059829 -134529459 + AluSc SINE Alu 1 302 -7 4148 183 110 4 chr10 11059936 11060683 -134528605 - LTR1B LTR ERV1 0 826 1 539 261 14 7 chr10 11061009 11061147 -134528141 - MER5B DNA MER1_type 0 178 40 4210 127 13 27 chr10 11061156 11061850 -134527438 + L1MA8 LINE L1 5607 6290 -1 209 288 141 28 chr10 11061944 11062121 -134527167 + MIR SINE MIR 15 211 -51 240 86 0 0 chr10 11062704 11062739 -134526549 + (CA)n Simple_repeat Simple_repeat 2 36 0 180 0 0 0 chr10 11063046 11063066 -134526222 + (CA)n Simple_repeat Simple_repeat 1 20 0 2308 117 0 0 chr10 11064273 11064582 -134524706 - AluSx SINE Alu -3 309 1 574 303 122 30 chr10 11065050 11065575 -134523713 - L1ME4a LINE L1 -195 5926 5354 633 291 66 0 chr10 11066705 11066901 -134522387 + MIR SINE MIR 28 236 -26 445 218 250 45 chr10 11067552 11067772 -134521516 + MER5C DNA MER1_type 25 289 -35 441 179 28 28 chr10 11067772 11067917 -134521371 + GA-rich Low_complexity Low_complexity 2 146 0 688 175 30 85 chr10 11069718 11069918 -134519370 + MER53 DNA DNA 1 189 0 201 233 0 0 chr10 11071749 11071792 -134517496 + (CCCCAA)n Simple_repeat Simple_repeat 3 45 0 437 280 0 65 chr10 11071986 11072154 -134517134 + MIR SINE MIR 80 236 -26 776 248 135 30 chr10 11073063 11073463 -134515825 - MER113 DNA MER1_type? -45 476 35 1888 154 3 25 chr10 11075017 11075336 -134513952 + AluSx SINE Alu 1 312 0 195 42 0 0 chr10 11075409 11075433 -134513855 + (CCCCCA)n Simple_repeat Simple_repeat 1 24 0 237 342 135 0 chr10 11076056 11076178 -134513110 - L1ME LINE L1 -214 5907 5803 1806 108 0 4 chr10 11076178 11076419 -134512869 - AluSq SINE Alu -20 293 54 237 342 135 0 chr10 11076419 11076489 -134512799 - L1ME LINE L1 -318 5803 5689 2269 101 3 3 chr10 11078010 11078316 -134510972 + AluSc SINE Alu 1 306 -3 809 321 82 27 chr10 11078671 11079388 -134509900 + L2 LINE L2 2307 3068 -245 257 275 14 0 chr10 11079425 11079494 -134509794 + MER116 DNA Mariner 7 76 -4 229 291 187 8 chr10 11079499 11079633 -134509655 + L2 LINE L2 3118 3275 -38 213 39 0 0 chr10 11079637 11079663 -134509625 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 213 333 16 0 chr10 11079702 11079765 -134509523 + L2 LINE L2 3203 3266 -47 864 252 28 33 chr10 11079979 11080193 -134509095 - MER58A DNA MER1_type 0 224 12 429 330 36 10 chr10 11080861 11081055 -134508233 - MIR SINE MIR -1 261 63 807 147 0 21 chr10 11081305 11081448 -134507840 - MER67A LTR ERV1 -322 221 82 487 152 48 29 chr10 11081473 11081578 -134507710 - MER67A LTR ERV1 -432 111 5 1495 207 23 42 chr10 11081584 11081937 -134507351 - MER67A-int LTR ERV1 -23 4913 4568 2278 106 0 3 chr10 11082020 11082323 -134506965 - AluSc SINE Alu -7 302 1 382 170 0 205 chr10 11082521 11082692 -134506596 - MER67A-int LTR ERV1 -467 4469 4334 260 191 162 15 chr10 11082697 11082765 -134506523 - LTR37A LTR ERV1 -336 90 13 6243 218 30 72 chr10 11082780 11084645 -134504643 - MER67A-int LTR ERV1 -687 4249 2463 257 214 36 80 chr10 11084682 11084794 -134504494 - MER67B-int LTR ERV1 -3799 4321 4215 856 251 33 45 chr10 11084797 11085222 -134504066 + MLT1B LTR MaLR 1 387 -3 357 237 92 15 chr10 11085226 11085357 -134503931 - MER67B-int LTR ERV1 -2579 2357 2217 * 550 224 75 42 chr10 11085324 11085565 -134503723 - MER67B-int LTR ERV1 -3004 1932 1684 4543 208 127 47 chr10 11085617 11086918 -134502370 - MER67B-int LTR ERV1 -3438 1498 94 1947 206 33 70 chr10 11087054 11087740 -134501548 - MER67B LTR ERV1 -32 558 8 2258 142 39 25 chr10 11087897 11088256 -134501032 - THE1B LTR MaLR 0 364 1 186 167 258 30 chr10 11088377 11088443 -134500845 + L2 LINE L2 3168 3248 -24 490 155 0 36 chr10 11089552 11089636 -134499652 - MER58A DNA MER1_type -24 83 3 234 0 0 0 chr10 11090034 11090060 -134499228 + (A)n Simple_repeat Simple_repeat 1 26 0 4328 78 49 7 chr10 11093019 11093607 -134495681 - L1MA1 LINE L1 0 6302 5690 309 276 71 10 chr10 11093699 11093797 -134495491 + MIR SINE MIR 9 112 -150 1993 108 0 78 chr10 11094361 11094695 -134494593 - AluSx SINE Alu -2 310 3 297 246 78 53 chr10 11094838 11095016 -134494272 + MIR SINE MIR 26 208 -54 25 0 0 0 chr10 11095056 11095081 -134494207 + AT_rich Low_complexity Low_complexity 1 25 0 419 281 124 52 chr10 11095245 11095512 -134493776 + L2 LINE L2 1875 2160 -1154 239 183 83 17 chr10 11095664 11095724 -134493564 + Charlie8 DNA MER1_type 1364 1427 -990 2722 100 6 0 chr10 11095734 11096085 -134493203 + THE1A LTR MaLR 1 353 -2 436 281 70 116 chr10 11096269 11096596 -134492692 - L2 LINE L2 -5 3267 2956 * 532 361 112 18 chr10 11096592 11097099 -134492189 - L2 LINE L2 -518 2796 2242 1558 154 64 7 chr10 11097468 11097748 -134491540 - AluJo SINE Alu -16 296 1 201 195 0 0 chr10 11098534 11098575 -134490713 + GA-rich Low_complexity Low_complexity 2 42 0 487 267 126 0 chr10 11099554 11099689 -134489599 - MIR SINE MIR -35 227 76 464 126 27 18 chr10 11099736 11099847 -134489441 + (TAGA)n Simple_repeat Simple_repeat 3 114 0 2481 67 0 13 chr10 11101014 11101329 -134487959 - AluY SINE Alu 0 311 1 436 268 75 49 chr10 11101528 11101696 -134487592 + MIR3 SINE MIR 34 208 -35 244 250 62 31 chr10 11101755 11101851 -134487437 - MIR SINE MIR 0 262 164 275 386 21 7 chr10 11102055 11102195 -134487093 - MIR SINE MIR -111 151 10 927 169 0 16 chr10 11102215 11102398 -134486890 + MER53 DNA DNA 10 189 0 270 0 0 0 chr10 11102918 11102948 -134486340 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 3322 187 53 8 chr10 11103765 11104496 -134484792 + L1MB3 LINE L1 5418 6181 -2 238 310 133 38 chr10 11105169 11105327 -134483961 + MIR3 SINE MIR 33 205 -3 21 0 0 0 chr10 11106096 11106117 -134483171 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 11106350 11106371 -134482917 + AT_rich Low_complexity Low_complexity 1 21 0 250 191 0 21 chr10 11107460 11107507 -134481781 + L2 LINE L2 3256 3301 -12 2221 116 0 0 chr10 11107509 11107802 -134481486 + AluSx SINE Alu 1 293 -19 2153 119 0 0 chr10 11107805 11108098 -134481190 + AluSx SINE Alu 1 293 -19 186 43 0 0 chr10 11108101 11108124 -134481164 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 351 0 0 0 chr10 11108833 11108872 -134480416 + (TG)n Simple_repeat Simple_repeat 2 40 0 5465 107 7 1 chr10 11109453 11110285 -134479003 + L1PA13 LINE L1 5314 6150 -13 198 198 44 99 chr10 11110376 11110467 -134478821 + L3 LINE CR1 1425 1510 -67 342 189 0 14 chr10 11110983 11111057 -134478231 - AluJ/FRAM SINE Alu -14 288 216 541 231 0 0 chr10 11111073 11111190 -134478098 - FLAM_A SINE Alu -6 136 20 2209 117 0 0 chr10 11111203 11111502 -134477786 - AluSx SINE Alu -13 299 1 888 303 65 65 chr10 11111667 11112343 -134476945 - L2 LINE L2 -812 2502 1827 1949 124 22 0 chr10 11112453 11112754 -134476534 - AluY SINE Alu 0 307 1 2041 109 46 57 chr10 11112918 11113286 -134476002 + THE1B LTR MaLR 1 364 0 9729 198 58 51 chr10 11113629 11114215 -134475073 - L1MC2 LINE L1 -11 7756 7176 312 242 11 11 chr10 11114215 11114306 -134474982 - MLT1F1 LTR MaLR -442 125 35 9729 198 58 51 chr10 11114306 11114677 -134474611 - L1MC2 LINE L1 -591 7176 6809 2073 104 3 27 chr10 11114677 11114976 -134474312 + AluSg SINE Alu 1 292 -18 9729 198 58 51 chr10 11114976 11116497 -134472791 - L1MC2 LINE L1 -958 6809 5301 4396 60 2 5 chr10 11116497 11117064 -134472224 - L1PA8 LINE L1 -7 6165 5601 9729 198 58 51 chr10 11117064 11119579 -134469709 - L1MC2 LINE L1 -2466 5301 2544 343 333 40 27 chr10 11119703 11119853 -134469435 + L3 LINE CR1 1417 1568 -9 357 198 47 19 chr10 11121425 11121531 -134467757 + L1MA9 LINE L1 6185 6293 -19 180 305 134 0 chr10 11121816 11121898 -134467390 + MIR3 SINE MIR 111 203 -5 281 219 52 0 chr10 11122958 11123054 -134466234 + (TA)n Simple_repeat Simple_repeat 2 102 0 252 266 53 53 chr10 11123546 11123659 -134465629 + MER5A DNA MER1_type 66 178 -11 403 194 41 20 chr10 11123556 11123654 -134465634 - MER5B DNA MER1_type -62 116 17 240 182 55 0 chr10 11123812 11123867 -134465421 + CT-rich Low_complexity Low_complexity 1 58 0 1144 194 65 50 chr10 11124893 11124934 -134464354 - L1MC4 LINE L1 -6 8036 7997 2034 118 9 41 chr10 11124934 11125249 -134464039 + AluSx SINE Alu 1 305 -7 1144 194 65 50 chr10 11125249 11125547 -134463741 - L1MC4 LINE L1 -45 7997 7692 2158 100 0 32 chr10 11125680 11125989 -134463299 + AluSg SINE Alu 1 299 -11 578 331 139 26 chr10 11125990 11126443 -134462845 - LTR67 LTR ERVL -44 513 10 556 294 34 0 chr10 11126463 11126609 -134462679 - MIR SINE MIR 0 262 112 2263 114 0 3 chr10 11126615 11126922 -134462366 - AluSx SINE Alu -3 309 4 470 122 293 8 chr10 11127039 11127162 -134462126 + L1MC/D LINE L1 5568 5725 -634 4215 220 23 20 chr10 11127179 11128616 -134460672 + L1MD2 LINE L1 4905 6349 -10 1935 151 0 7 chr10 11128815 11129100 -134460188 - AluSx SINE Alu -29 283 1 208 122 0 122 chr10 11131579 11131628 -134457660 - L2 LINE L2 -3 3310 3268 197 329 49 12 chr10 11131678 11131760 -134457528 - L2 LINE L2 -8 3305 3221 463 330 39 17 chr10 11132451 11132684 -134456604 + L2 LINE L2 1503 1740 -1574 1280 281 85 60 chr10 11132685 11133428 -134455860 + L1MEc LINE L1 55 846 -5550 390 68 0 40 chr10 11133428 11133502 -134455786 + (TA)n Simple_repeat Simple_repeat 1 71 0 1280 281 85 60 chr10 11133502 11134049 -134455239 + L1MEc LINE L1 846 1378 -5018 261 288 55 0 chr10 11134083 11134156 -134455132 - MLT1H LTR MaLR -249 300 224 354 234 234 34 chr10 11134291 11134530 -134454758 + L2 LINE L2 3026 3312 -1 1412 200 80 47 chr10 11135698 11136187 -134453101 - Charlie1b DNA MER1_type -2 521 17 903 200 101 37 chr10 11136413 11136743 -134452545 - MER57A LTR ERV1 0 403 113 784 194 7 0 chr10 11136768 11136907 -134452381 - FRAM SINE Alu -39 137 1 1461 201 60 0 chr10 11136924 11137193 -134452095 - AluJb SINE Alu -27 285 1 947 299 65 37 chr10 11138003 11138538 -134450750 - MLT1F1 LTR MaLR -17 550 1 197 291 0 0 chr10 11138944 11138999 -134450289 - L2 LINE L2 -2814 500 446 210 184 0 0 chr10 11139069 11139107 -134450181 - MIR SINE MIR -75 187 150 452 255 0 10 chr10 11139249 11139351 -134449937 + MIR SINE MIR 48 148 -114 604 62 0 12 chr10 11139396 11139477 -134449811 + MADE1 DNA Mariner 1 80 0 1047 265 58 6 chr10 11139566 11139891 -134449397 + MER93a LTR ERV1 61 402 0 253 240 47 108 chr10 11140001 11140130 -134449158 + MIR3 SINE MIR 60 180 -28 1633 226 3 21 chr10 11140230 11140610 -134448678 - MLT1A2 LTR MaLR 0 374 2 2123 119 23 10 chr10 11142150 11142452 -134446836 + AluSx SINE Alu 2 307 -5 1770 117 140 0 chr10 11142494 11142759 -134446529 + AluSq SINE Alu 1 302 -11 1031 209 30 0 chr10 11142903 11143104 -134446184 + MER63A DNA MER1_type 4 210 0 762 268 119 35 chr10 11143919 11144467 -134444821 - MLT1G1 LTR MaLR 0 595 2 257 177 0 16 chr10 11144585 11144647 -134444641 + L1ME3A LINE L1 6109 6169 -1 2130 120 0 10 chr10 11145105 11145397 -134443891 + AluSg SINE Alu 5 293 -17 520 250 42 8 chr10 11145654 11145774 -134443514 + FLAM_A SINE Alu 1 124 -9 423 118 0 40 chr10 11147328 11147404 -134441884 + AluSc SINE Alu 9 81 -228 186 240 0 0 chr10 11147420 11147470 -134441818 + GA-rich Low_complexity Low_complexity 3 52 0 180 0 0 0 chr10 11148476 11148496 -134440792 + (CAA)n Simple_repeat Simple_repeat 2 21 0 22 70 0 0 chr10 11149022 11149065 -134440223 + AT_rich Low_complexity Low_complexity 1 43 0 21 36 0 0 chr10 11149167 11149195 -134440093 + AT_rich Low_complexity Low_complexity 1 28 0 1647 133 13 74 chr10 11149848 11150157 -134439131 + AluJo SINE Alu 1 290 -22 23 0 0 0 chr10 11150543 11150566 -134438722 + AT_rich Low_complexity Low_complexity 1 23 0 182 128 26 0 chr10 11152679 11152718 -134436570 + (TG)n Simple_repeat Simple_repeat 1 40 0 1933 143 6 16 chr10 11153021 11153370 -134435918 - MER4A LTR ERV1 0 664 261 622 111 10 20 chr10 11153370 11153469 -134435819 - MER4A LTR ERV1 -566 98 1 195 100 0 0 chr10 11153608 11153638 -134435650 + (TTCC)n Simple_repeat Simple_repeat 3 32 0 205 310 169 38 chr10 11155299 11155483 -134433805 - L3b LINE CR1 -6 1577 1370 386 296 30 30 chr10 11156964 11157194 -134432094 - HAL1b LINE L1 -646 702 473 22 80 0 0 chr10 11158585 11158635 -134430653 + AT_rich Low_complexity Low_complexity 1 50 0 340 121 35 0 chr10 11159572 11159630 -134429658 + MER116 DNA Mariner 21 80 0 638 196 0 12 chr10 11159694 11159857 -134429431 + CT-rich Low_complexity Low_complexity 2 162 0 2246 119 0 3 chr10 11160783 11161086 -134428202 + AluSg SINE Alu 3 304 -6 959 247 113 14 chr10 11161433 11161818 -134427470 - MLT1D LTR MaLR 0 505 17 22 0 0 0 chr10 11161888 11161910 -134427378 + AT_rich Low_complexity Low_complexity 1 22 0 362 152 0 13 chr10 11161925 11162004 -134427284 + CT-rich Low_complexity Low_complexity 3 80 0 1733 182 7 0 chr10 11162375 11162671 -134426617 + AluJo SINE Alu 1 298 -14 2275 106 3 3 chr10 11163589 11163892 -134425396 - AluSx SINE Alu -9 303 1 220 328 144 55 chr10 11164487 11164813 -134424475 + L2 LINE L2 2918 3272 0 2274 103 0 0 chr10 11166552 11166870 -134422418 + AluSq SINE Alu 1 318 0 418 302 83 29 chr10 11167268 11167473 -134421815 - MIR SINE MIR -14 248 33 421 314 16 37 chr10 11167528 11167763 -134421525 + MIR SINE MIR 3 228 -34 189 261 25 84 chr10 11168956 11169075 -134420213 - MIR SINE MIR -75 187 76 2838 138 26 5 chr10 11169359 11169778 -134419510 - MSTA LTR MaLR 0 428 1 487 268 158 22 chr10 11170821 11171004 -134418284 - MIR SINE MIR -27 235 28 1036 231 78 14 chr10 11171127 11171409 -134417879 + MLT1-int LTR MaLR 357 656 -715 420 238 16 33 chr10 11171456 11171578 -134417710 + L1ME1 LINE L1 22 141 -6255 1801 262 20 22 chr10 11171601 11172094 -134417194 + L1ME1 LINE L1 121 612 -5784 470 216 0 0 chr10 11172122 11172219 -134417069 + L1ME1 LINE L1 2316 2412 -3984 1531 203 69 38 chr10 11172223 11172640 -134416648 + MLT1C LTR MaLR 6 435 -32 366 192 14 14 chr10 11172640 11172713 -134416575 - Tigger5 DNA MER2_type 0 2323 2251 305 218 0 0 chr10 11172682 11172737 -134416551 - Tigger5 DNA MER2_type -2268 55 1 * 4266 198 37 8 chr10 11172771 11173630 -134415658 + MLT1C-int LTR MaLR 1 884 -487 1506 207 25 13 chr10 11173814 11174128 -134415160 + MLT1C-int LTR MaLR 959 1276 -95 545 237 0 0 chr10 11174149 11174263 -134415025 + MLT1C LTR MaLR 353 466 -1 7590 225 61 86 chr10 11174266 11175284 -134414004 + L1ME1 LINE L1 2380 3422 -2813 485 227 182 0 chr10 11175284 11175416 -134413872 - MER58C DNA MER1_type 0 215 60 2455 107 169 0 chr10 11175416 11175782 -134413506 - MSTA LTR MaLR 0 428 1 7590 225 61 86 chr10 11175782 11177606 -134411682 + L1ME1 LINE L1 3421 5281 -954 322 85 0 0 chr10 11177606 11177653 -134411635 + MADE1 DNA Mariner 1 47 -33 7590 225 61 86 chr10 11177653 11178580 -134410708 + L1ME1 LINE L1 5281 6230 -5 473 164 0 65 chr10 11178590 11178856 -134410432 + GA-rich Low_complexity Low_complexity 1 248 0 247 343 6 45 chr10 11179985 11180041 -134409247 - L1MC/D LINE L1 -1907 5901 5844 1777 162 3 23 chr10 11180041 11180350 -134408938 - AluJo SINE Alu -9 303 1 247 343 6 45 chr10 11180350 11180471 -134408817 - L1MC/D LINE L1 -1964 5844 5731 347 238 125 50 chr10 11180874 11181034 -134408254 + MIR SINE MIR 90 261 -1 1696 158 0 55 chr10 11181280 11181416 -134407872 + AluSx SINE Alu 1 143 -169 2460 80 3 3 chr10 11181416 11181727 -134407561 + AluY SINE Alu 1 311 0 1696 158 0 55 chr10 11181727 11181918 -134407370 + AluSx SINE Alu 143 310 -2 317 269 10 39 chr10 11182184 11182288 -134407000 - L2 LINE L2 -34 3279 3179 2377 91 0 0 chr10 11182527 11182825 -134406463 - AluSc SINE Alu 0 309 12 246 156 0 0 chr10 11182918 11182963 -134406325 + (CA)n Simple_repeat Simple_repeat 2 46 0 261 0 0 0 chr10 11183457 11183486 -134405802 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 2566 62 0 3 chr10 11184034 11184339 -134404949 - AluY SINE Alu -7 304 1 2063 128 3 10 chr10 11184603 11184909 -134404379 - AluSx SINE Alu -8 304 1 296 306 44 49 chr10 11185591 11185774 -134403514 + L2 LINE L2 3132 3313 0 23 54 0 0 chr10 11185999 11186036 -134403252 + AT_rich Low_complexity Low_complexity 1 37 0 2172 127 3 16 chr10 11186233 11186549 -134402739 + AluSx SINE Alu 1 312 0 465 199 33 124 chr10 11188012 11188214 -134401074 + L2 LINE L2 3027 3205 -108 2062 84 59 0 chr10 11188214 11188487 -134400801 - AluSc SINE Alu -20 289 1 465 199 33 124 chr10 11188487 11188525 -134400763 + L2 LINE L2 3205 3245 -68 674 288 14 28 chr10 11188607 11188822 -134400466 + MIR SINE MIR 15 226 -36 2364 106 0 0 chr10 11189199 11189510 -134399778 - AluSq SINE Alu -2 311 1 260 111 0 0 chr10 11189605 11189641 -134399647 + (GAAA)n Simple_repeat Simple_repeat 2 37 0 746 146 6 24 chr10 11189641 11189806 -134399482 + GA-rich Low_complexity Low_complexity 1 162 0 21 36 0 0 chr10 11190274 11190302 -134398986 + AT_rich Low_complexity Low_complexity 1 28 0 218 265 15 15 chr10 11190475 11190543 -134398745 - MIR SINE MIR -67 141 74 2199 119 0 10 chr10 11190666 11190969 -134398319 + AluSx SINE Alu 1 300 -12 198 264 0 38 chr10 11191145 11191198 -134398090 - MIR SINE MIR -13 249 199 1530 176 0 88 chr10 11191225 11191554 -134397734 - AluJo SINE Alu -12 300 1 196 254 90 97 chr10 11191614 11191748 -134397540 + L2 LINE L2 3181 3313 0 2142 134 0 0 chr10 11192425 11192732 -134396556 - AluSx SINE Alu -5 307 1 1657 178 0 26 chr10 11193151 11193460 -134395828 - AluJo SINE Alu -11 301 1 722 257 41 41 chr10 11193466 11193684 -134395604 + MER20 DNA MER1_type 1 218 -1 2033 144 3 0 chr10 11194808 11195113 -134394175 + AluSx SINE Alu 1 306 -6 352 240 11 27 chr10 11196497 11196680 -134392608 + GA-rich Low_complexity Low_complexity 1 180 0 2127 126 0 0 chr10 11196757 11197074 -134392214 - AluSx SINE Alu 0 317 1 2350 84 7 0 chr10 11197079 11197387 -134391901 - AluSx SINE Alu -2 310 1 238 240 123 45 chr10 11197445 11197599 -134391689 - L2 LINE L2 -1690 1624 1459 23 0 0 0 chr10 11199517 11199540 -134389748 + AT_rich Low_complexity Low_complexity 1 23 0 1819 15 0 0 chr10 11199930 11200130 -134389158 + AluY SINE Alu 111 310 -1 1383 215 90 56 chr10 11201978 11202354 -134386934 + MSTD LTR MaLR 3 391 -5 1272 316 125 33 chr10 11202666 11203246 -134386042 + L2 LINE L2 1905 2599 -715 1769 189 3 3 chr10 11203246 11203548 -134385740 - AluJo SINE Alu -10 302 1 1272 316 125 33 chr10 11203548 11203870 -134385418 + L2 LINE L2 2599 2890 -424 196 175 25 0 chr10 11204068 11204108 -134385180 + L2 LINE L2 3226 3266 -6 822 263 29 0 chr10 11204264 11204473 -134384815 + MER58A DNA MER1_type 10 224 0 317 156 62 0 chr10 11204659 11204723 -134384565 + L2 LINE L2 3232 3299 -14 272 273 0 0 chr10 11204741 11204818 -134384470 + (TGAA)n Simple_repeat Simple_repeat 1 77 0 481 315 94 8 chr10 11205010 11205245 -134384043 + MIR SINE MIR 7 261 -1 790 231 56 19 chr10 11205340 11205556 -134383732 + MIR SINE MIR 2 225 -37 2458 115 43 0 chr10 11207571 11207920 -134381368 - THE1B LTR MaLR 0 364 1 1660 141 52 20 chr10 11208023 11208370 -134380918 + L1MA7 LINE L1 5934 6291 0 260 122 41 0 chr10 11208484 11208533 -134380755 + (TATG)n Simple_repeat Simple_repeat 2 52 0 1857 142 0 27 chr10 11208832 11209127 -134380161 + AluJb SINE Alu 1 287 -25 4725 151 27 21 chr10 11209131 11209993 -134379295 - L1MA6 LINE L1 -12 6288 5422 348 297 27 18 chr10 11210116 11210227 -134379061 + L2 LINE L2 3156 3267 -5 2043 121 0 33 chr10 11211701 11212007 -134377281 + AluSx SINE Alu 13 308 -4 199 369 72 0 chr10 11212208 11212319 -134376969 - MIR3 SINE MIR -6 202 84 430 240 0 10 chr10 11212658 11212762 -134376526 - MER5A DNA MER1_type -83 106 4 2244 105 6 16 chr10 11212936 11213249 -134376039 - AluSx SINE Alu -2 310 1 245 323 127 1 chr10 11214481 11214788 -134374500 - LTR16C LTR ERVL -10 481 106 2123 115 7 7 chr10 11215081 11215405 -134373883 - AluSx SINE Alu 0 312 1 2484 76 0 0 chr10 11215492 11215794 -134373494 + AluY SINE Alu 1 302 -9 2103 143 7 0 chr10 11217531 11217831 -134371457 + AluSx SINE Alu 1 302 -10 1768 234 94 31 chr10 11218003 11218546 -134370742 - MLT1E LTR MaLR -2 591 15 958 183 144 18 chr10 11218882 11219111 -134370177 + LOR1a LTR ERV1 238 495 -2 185 0 40 0 chr10 11219414 11219439 -134369849 + (TTTG)n Simple_repeat Simple_repeat 1 26 0 1828 153 0 11 chr10 11219439 11219721 -134369567 - AluSx SINE Alu -33 279 1 474 283 66 0 chr10 11219955 11220107 -134369181 + L2 LINE L2 1858 2019 -1295 2163 134 0 3 chr10 11220415 11220722 -134368566 - AluSx SINE Alu -6 306 1 248 259 86 43 chr10 11220778 11220917 -134368371 - L2 LINE L2 -1697 1617 1473 503 239 81 53 chr10 11222479 11222688 -134366600 - MIR SINE MIR -36 226 12 193 200 13 6 chr10 11223404 11223449 -134365839 + L2 LINE L2 3186 3272 -41 1859 142 0 77 chr10 11225329 11225667 -134363621 + AluSx SINE Alu 1 312 0 1551 193 53 3 chr10 11226971 11227256 -134362032 - AluJo SINE Alu -13 299 1 1433 291 46 53 chr10 11229382 11230031 -134359257 + L1MC4a LINE L1 4945 5412 -758 2200 102 0 7 chr10 11230031 11230365 -134358923 - AluSg SINE Alu 0 332 1 1433 291 46 53 chr10 11230365 11230758 -134358530 + L1MC4a LINE L1 5412 5806 -364 455 296 47 6 chr10 11230939 11231108 -134358180 - MIR SINE MIR -74 188 13 180 250 0 0 chr10 11231202 11231242 -134358046 + MER5A DNA MER1_type 66 105 -84 573 273 46 21 chr10 11231353 11231547 -134357741 - MIR SINE MIR -61 201 3 194 264 0 0 chr10 11231669 11231722 -134357566 - MIR SINE MIR -60 148 96 242 360 23 6 chr10 11232268 11232443 -134356845 + MIR SINE MIR 30 207 -55 1805 160 3 29 chr10 11232465 11232777 -134356511 + AluJo SINE Alu 1 304 -8 272 295 97 14 chr10 11232817 11233024 -134356264 - L3 LINE CR1 -205 1372 1149 1613 172 51 3 chr10 11234395 11234691 -134354597 + AluJo SINE Alu 1 310 -2 1918 118 3 78 chr10 11234794 11235116 -134354172 + AluSx SINE Alu 1 298 -14 1992 138 3 22 chr10 11237282 11237600 -134351688 + AluSx SINE Alu 1 312 0 808 135 8 16 chr10 11237766 11237892 -134351396 + AluJb SINE Alu 1 125 -187 269 109 62 0 chr10 11237897 11237961 -134351327 + GA-rich Low_complexity Low_complexity 2 69 0 1491 202 10 17 chr10 11238260 11238552 -134350736 + AluJo SINE Alu 1 290 -22 573 15 0 0 chr10 11238814 11238880 -134350408 + (TTTTG)n Simple_repeat Simple_repeat 5 70 0 2093 99 0 48 chr10 11238880 11239174 -134350114 - AluSx SINE Alu -32 280 1 643 178 153 0 chr10 11241265 11241422 -134347866 - MER5A DNA MER1_type -7 182 2 2397 152 7 22 chr10 11242806 11243215 -134346073 - MER57A LTR ERV1 0 403 1 509 270 68 20 chr10 11243251 11243615 -134345673 - LTR16B LTR ERVL 0 464 48 189 0 0 0 chr10 11243738 11243759 -134345529 + (CA)n Simple_repeat Simple_repeat 1 21 0 1169 134 0 29 chr10 11244917 11245088 -134344200 + AluSg/x SINE Alu 124 289 -23 230 276 17 0 chr10 11245376 11245434 -134343854 + C-rich Low_complexity Low_complexity 3 61 0 2030 131 7 0 chr10 11245879 11246186 -134343102 - AluSx SINE Alu 0 309 1 207 24 24 48 chr10 11247380 11247422 -134341866 + (TTG)n Simple_repeat Simple_repeat 2 42 0 2101 132 0 0 chr10 11247425 11247706 -134341582 - AluSx SINE Alu -31 281 1 401 145 0 0 chr10 11247741 11247817 -134341471 - L1MA9 LINE L1 -10 6302 6227 255 267 27 0 chr10 11248090 11248165 -134341123 - MER103 DNA DNA 0 166 90 2047 113 33 3 chr10 11248827 11249127 -134340161 + AluSx SINE Alu 1 309 -3 1491 196 0 4 chr10 11249412 11249687 -134339601 - AluJo SINE Alu -38 274 1 461 273 173 18 chr10 11249826 11250046 -134339242 + MIR SINE MIR 8 261 -1 1601 181 0 52 chr10 11250943 11251253 -134338035 - AluJb SINE Alu -18 294 1 1333 197 114 62 chr10 11251542 11252003 -134337285 - MER66A LTR ERV1 0 478 97 309 337 8 32 chr10 11252065 11252222 -134337066 - MIR SINE MIR -66 142 1 463 349 96 0 chr10 11253574 11253772 -134335516 + MIR SINE MIR 25 241 -21 186 71 0 0 chr10 11253844 11253872 -134335416 + (T)n Simple_repeat Simple_repeat 1 28 0 2123 136 0 0 chr10 11255208 11255517 -134333771 + AluJb SINE Alu 1 309 -3 482 257 27 81 chr10 11256407 11256607 -134332681 + L2 LINE L2 2921 3105 -208 653 233 0 0 chr10 11256607 11256740 -134332548 - FLAM_C SINE Alu 0 133 1 482 257 27 81 chr10 11256740 11256800 -134332488 + L2 LINE L2 3105 3167 -146 189 224 41 0 chr10 11256920 11256969 -134332319 + L2 LINE L2 3262 3312 -1 593 242 26 13 chr10 11257529 11257682 -134331606 - MIR SINE MIR -3 259 105 2301 116 3 0 chr10 11257764 11258074 -134331214 - AluSq SINE Alu -2 311 1 2294 110 10 7 chr10 11259374 11259684 -134329604 - AluSx SINE Alu -1 311 1 429 310 155 14 chr10 11259867 11260080 -134329208 - MIR SINE MIR 0 262 20 33 25 0 0 chr10 11260578 11260618 -134328670 + AT_rich Low_complexity Low_complexity 1 40 0 5892 87 27 60 chr10 11263546 11264114 -134325174 + L1PB2 LINE L1 5255 5783 -368 180 0 0 0 chr10 11264114 11264134 -134325154 + (GA)n Simple_repeat Simple_repeat 2 21 0 5892 87 27 60 chr10 11264134 11264490 -134324798 + L1PB2 LINE L1 5783 6149 -2 343 293 154 35 chr10 11265610 11265869 -134323419 + L1ME3A LINE L1 5307 5596 -2212 409 291 110 0 chr10 11265889 11266143 -134323145 + L1ME3A LINE L1 5651 5932 -189 195 42 0 0 chr10 11266785 11266809 -134322479 + (TG)n Simple_repeat Simple_repeat 1 24 0 212 210 32 16 chr10 11267014 11267076 -134322212 + (TG)n Simple_repeat Simple_repeat 2 64 0 396 292 73 7 chr10 11267783 11267920 -134321368 - L2 LINE L2 -6 3307 3162 226 264 9 75 chr10 11267969 11268075 -134321213 - MLT1J2 LTR MaLR -50 400 302 262 255 49 0 chr10 11268496 11268598 -134320690 + (TAGA)n Simple_repeat Simple_repeat 3 109 0 1442 252 66 22 chr10 11268599 11269125 -134320163 - MLT2F LTR ERVL -60 603 9 299 287 61 77 chr10 11269148 11269329 -134319959 - L2 LINE L2 -188 3084 2907 657 299 57 30 chr10 11269339 11269561 -134319727 - MER90 LTR ERV1 -13 601 368 1782 162 114 11 chr10 11269561 11269912 -134319376 + MLT1B LTR MaLR 4 390 0 657 299 57 30 chr10 11269912 11269987 -134319301 - MER90 LTR ERV1 -246 368 296 1601 156 58 134 chr10 11270268 11270596 -134318692 + Charlie3 DNA MER1_type 37 2712 0 187 362 0 0 chr10 11270928 11270975 -134318313 + L2 LINE L2 3139 3185 -87 320 316 182 34 chr10 11271213 11271630 -134317658 - L2 LINE L2 -243 3029 2546 465 214 43 26 chr10 11271752 11271869 -134317419 + L1ME3A LINE L1 6051 6169 -1 198 290 21 11 chr10 11272938 11273031 -134316257 + MIR SINE MIR 60 153 -109 345 153 0 9 chr10 11273074 11273145 -134316143 + FAM SINE Alu 115 174 -1 2767 84 31 6 chr10 11273677 11274032 -134315256 + THE1B LTR MaLR 1 364 0 457 269 103 26 chr10 11275071 11275227 -134314061 - L2 LINE L2 -12 3301 3134 1041 188 0 0 chr10 11275277 11275437 -134313851 + FRAM SINE Alu 4 163 -3 2355 114 35 44 chr10 11277839 11278206 -134311082 - THE1B LTR MaLR 0 364 1 199 302 43 69 chr10 11278413 11278529 -134310759 + MIR SINE MIR 94 206 -56 222 261 90 27 chr10 11279400 11279511 -134309777 - MIR SINE MIR -110 152 35 303 93 0 0 chr10 11280223 11280266 -134309022 + (TG)n Simple_repeat Simple_repeat 2 44 0 457 68 27 0 chr10 11281049 11281123 -134308165 + (GA)n Simple_repeat Simple_repeat 2 77 0 212 278 0 44 chr10 11281362 11281452 -134307836 + GA-rich Low_complexity Low_complexity 2 87 0 354 80 0 0 chr10 11285137 11285187 -134304101 + (TG)n Simple_repeat Simple_repeat 1 50 0 346 208 87 54 chr10 11286305 11286454 -134302834 - MIR SINE MIR -28 234 81 23 0 0 0 chr10 11287275 11287298 -134301990 + AT_rich Low_complexity Low_complexity 1 23 0 196 261 43 0 chr10 11288703 11288749 -134300539 - L2 LINE L2 -20 3252 3205 210 246 18 18 chr10 11289057 11289114 -134300174 + GA-rich Low_complexity Low_complexity 1 57 0 203 260 0 0 chr10 11292608 11292658 -134296630 + (TATG)n Simple_repeat Simple_repeat 2 51 0 333 241 102 139 chr10 11293389 11293858 -134295430 - L1M2 LINE L1 -5842 1007 556 21 57 0 0 chr10 11293873 11293908 -134295380 + GC_rich Low_complexity Low_complexity 1 35 0 424 293 122 57 chr10 11294004 11294630 -134294658 - L1M2 LINE L1 -5446 1403 833 26 0 0 0 chr10 11297083 11297109 -134292179 + AT_rich Low_complexity Low_complexity 1 26 0 374 261 76 0 chr10 11297269 11297361 -134291927 - MIR3 SINE MIR -19 189 91 248 234 147 0 chr10 11297466 11297550 -134291738 - MIR SINE MIR -61 147 57 1877 134 14 0 chr10 11300143 11300420 -134288868 + AluSx SINE Alu 1 281 -31 252 59 0 0 chr10 11300428 11300462 -134288826 + (TAA)n Simple_repeat Simple_repeat 1 34 0 333 68 0 0 chr10 11301028 11301072 -134288216 + (TG)n Simple_repeat Simple_repeat 1 44 0 2183 156 24 24 chr10 11301103 11301476 -134287812 + THE1C LTR MaLR 3 375 0 190 121 30 30 chr10 11302423 11302456 -134286832 - L3 LINE CR1 -508 1069 1037 2451 90 0 3 chr10 11304227 11304538 -134284750 - AluSg SINE Alu 0 310 1 2031 129 27 7 chr10 11304538 11304833 -134284455 - AluSx SINE Alu -11 301 1 213 355 74 8 chr10 11306045 11306166 -134283122 - MIR SINE MIR -27 235 107 225 0 0 0 chr10 11307966 11307991 -134281297 + (A)n Simple_repeat Simple_repeat 1 25 0 473 217 0 11 chr10 11308155 11308247 -134281041 + FLAM_A SINE Alu 1 91 -51 2266 94 10 0 chr10 11309077 11309376 -134279912 - AluSp SINE Alu -11 302 1 471 254 25 8 chr10 11310780 11310898 -134278390 - MER94 DNA DNA -13 121 2 2517 118 31 11 chr10 11312867 11313223 -134276065 - THE1B LTR MaLR 0 364 2 22 0 0 0 chr10 11313660 11313682 -134275606 + AT_rich Low_complexity Low_complexity 1 22 0 272 257 14 14 chr10 11316420 11316490 -134272798 - L2 LINE L2 -1 3312 3243 21 89 0 0 chr10 11316608 11316664 -134272624 + AT_rich Low_complexity Low_complexity 1 56 0 1706 216 44 19 chr10 11316759 11317120 -134272168 - MLT1A2 LTR MaLR 0 374 5 2903 184 65 19 chr10 11318356 11318999 -134270289 - L1MB7 LINE L1 -31 6153 5481 214 267 129 30 chr10 11319025 11319126 -134270162 - MIR SINE MIR -67 141 31 1004 289 191 24 chr10 11319258 11320189 -134269099 + L2 LINE L2 2224 3308 -5 676 160 0 0 chr10 11320970 11321070 -134268218 - AluJo SINE Alu -15 297 198 741 201 0 15 chr10 11321086 11321220 -134268068 - AluJo SINE Alu -179 133 2 450 240 100 27 chr10 11321253 11321403 -134267885 + MIR SINE MIR 102 262 0 582 196 23 81 chr10 11321992 11322165 -134267123 - MER5A DNA MER1_type -26 163 1 213 237 0 34 chr10 11322183 11322242 -134267046 + L2 LINE L2 3246 3302 -11 321 252 19 10 chr10 11323193 11323296 -134265992 + MER103 DNA DNA 17 120 -46 189 244 0 0 chr10 11323327 11323368 -134265920 - MER5A DNA MER1_type -148 41 1 216 0 0 0 chr10 11325377 11325401 -134263887 + (A)n Simple_repeat Simple_repeat 1 24 0 333 311 120 58 chr10 11327358 11327599 -134261689 - L2 LINE L2 0 3272 3017 942 173 25 130 chr10 11327720 11328044 -134261244 - AluY SINE Alu -11 300 11 2620 59 0 0 chr10 11329427 11329732 -134259556 - AluY SINE Alu -6 305 1 187 174 0 87 chr10 11329967 11330013 -134259275 + MIR SINE MIR 221 262 0 369 43 0 0 chr10 11330294 11330341 -134258947 + (TG)n Simple_repeat Simple_repeat 2 48 0 1931 132 17 0 chr10 11330545 11330833 -134258455 - AluSx SINE Alu -19 293 1 191 288 0 34 chr10 11331384 11331443 -134257845 + L3 LINE CR1 1513 1569 -8 2342 95 0 19 chr10 11334268 11334584 -134254704 - AluSx SINE Alu 0 312 3 252 0 0 0 chr10 11334588 11334616 -134254672 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 1428 209 0 7 chr10 11334628 11334901 -134254387 - AluJo SINE Alu -41 271 1 190 308 67 29 chr10 11334903 11335007 -134254281 - MIR SINE MIR -119 143 36 13726 147 45 29 chr10 11336398 11337626 -134251662 + Tigger1 DNA MER2_type 1 1207 -1211 2074 113 3 7 chr10 11337626 11337917 -134251371 - AluSx SINE Alu -9 303 14 13726 147 45 29 chr10 11337917 11339065 -134250223 + Tigger1 DNA MER2_type 1207 2416 -2 180 259 0 35 chr10 11339262 11339320 -134249968 - MIR SINE MIR -2 260 205 280 330 19 28 chr10 11339577 11339683 -134249605 + MER5B DNA MER1_type 3 107 -71 600 247 79 82 chr10 11341491 11342008 -134247280 - L2 LINE L2 -70 3243 2722 372 308 81 19 chr10 11342141 11342352 -134246936 - MIR SINE MIR -25 237 14 431 304 38 22 chr10 11343545 11343691 -134245597 + MIR SINE MIR 8 154 -64 421 308 98 66 chr10 11343944 11344227 -134245061 - L2 LINE L2 -22 3291 3019 6155 190 82 26 chr10 11344227 11344380 -134244908 + Looper DNA T2_type 1 144 -1414 2486 70 0 0 chr10 11344380 11344678 -134244610 - AluY SINE Alu -13 298 1 6155 190 82 26 chr10 11344678 11346000 -134243288 + Looper DNA T2_type 144 1558 0 421 308 98 66 chr10 11346000 11346283 -134243005 - L2 LINE L2 -294 3019 2696 535 314 73 58 chr10 11346299 11346849 -134242439 - L2 LINE L2 -1005 2309 1752 581 208 52 32 chr10 11347124 11347278 -134242010 - MIR SINE MIR -59 203 47 265 214 57 14 chr10 11349354 11349424 -134239864 - MIR SINE MIR 0 262 190 475 296 123 6 chr10 11352760 11352922 -134236366 + MIR3 SINE MIR 6 186 -22 1965 133 91 28 chr10 11355206 11355559 -134233729 + THE1C LTR MaLR 1 375 0 487 234 168 24 chr10 11355879 11356046 -134233242 + MIR SINE MIR 16 206 -56 194 250 0 39 chr10 11356154 11356206 -134233082 + L2 LINE L2 3217 3266 -6 521 251 43 53 chr10 11358294 11358481 -134230807 + MIR3 SINE MIR 23 207 -1 485 327 75 9 chr10 11359504 11359718 -134229570 + MIR SINE MIR 13 240 -22 397 331 82 6 chr10 11361026 11361180 -134228108 - MIR3 SINE MIR -35 173 5 489 233 128 23 chr10 11361330 11361502 -134227786 - MIR SINE MIR -46 216 27 425 215 28 19 chr10 11361734 11361841 -134227447 + MIR SINE MIR 109 216 -46 288 0 0 0 chr10 11362397 11362429 -134226859 + (A)n Simple_repeat Simple_repeat 1 32 0 186 346 0 0 chr10 11363816 11363868 -134225420 - L2 LINE L2 -21 3292 3241 246 388 70 22 chr10 11364059 11364371 -134224917 - L2 LINE L2 -338 2976 2650 1277 252 88 39 chr10 11364492 11365076 -134224212 - MLT1G LTR MaLR -13 577 1 3125 145 21 15 chr10 11365496 11366019 -134223269 + L1PA16 LINE L1 5641 6166 0 425 287 0 0 chr10 11366404 11366519 -134222769 + L1ME LINE L1 5706 5820 -301 1316 223 97 5 chr10 11367610 11367991 -134221297 - LTR37B LTR ERV1 0 468 53 896 185 209 24 chr10 11368215 11368469 -134220819 - MER39 LTR ERV1 0 707 407 374 241 92 52 chr10 11368439 11368613 -134220675 - MER34 LTR ERV1 -295 247 67 * 27 29 0 0 chr10 11369206 11369240 -134220048 + AT_rich Low_complexity Low_complexity 1 34 0 189 74 0 0 chr10 11375703 11375730 -134213558 + (A)n Simple_repeat Simple_repeat 1 27 0 1926 129 0 11 chr10 11375737 11376063 -134213225 + AluSx SINE Alu 1 323 0 349 88 35 0 chr10 11376196 11376253 -134213035 - L1PB2 LINE L1 -2 6149 6091 640 316 53 32 chr10 11376881 11377258 -134212030 - L2 LINE L2 -780 2534 2150 190 312 233 20 chr10 11378614 11378867 -134210421 + L2 LINE L2 2450 2756 -558 187 263 35 35 chr10 11379079 11379136 -134210152 + L2 LINE L2 2992 3048 -224 180 0 0 0 chr10 11379306 11379326 -134209962 + (T)n Simple_repeat Simple_repeat 1 20 0 364 270 32 40 chr10 11379327 11379453 -134209835 + MIR SINE MIR 81 205 -57 1596 184 32 0 chr10 11380234 11380512 -134208776 + AluJb SINE Alu 8 294 -18 504 288 34 77 chr10 11381029 11381262 -134208026 + MIR SINE MIR 15 237 -25 2111 130 0 7 chr10 11382005 11382355 -134206933 - AluSx SINE Alu 0 312 1 201 230 22 37 chr10 11383600 11383735 -134205553 + CT-rich Low_complexity Low_complexity 1 133 0 296 185 0 37 chr10 11383821 11383929 -134205359 + CT-rich Low_complexity Low_complexity 2 105 0 493 254 136 18 chr10 11384470 11384749 -134204539 - L1M2 LINE L1 -732 5565 5254 255 316 76 41 chr10 11385266 11385437 -134203851 - MIR3 SINE MIR -14 194 18 1720 156 0 49 chr10 11385795 11386103 -134203185 + AluJo SINE Alu 1 293 -19 285 253 10 50 chr10 11390748 11390847 -134198441 + L2 LINE L2 3219 3313 0 871 305 28 0 chr10 11392673 11392922 -134196366 - MIR SINE MIR -5 257 2 258 298 164 0 chr10 11393056 11393160 -134196128 + MIR SINE MIR 34 154 -108 704 152 0 18 chr10 11394174 11394286 -134195002 - FLAM_C SINE Alu -32 111 2 275 305 38 23 chr10 11394350 11394475 -134194813 - MIR SINE MIR -51 157 39 289 252 96 26 chr10 11394638 11394753 -134194535 + MIR SINE MIR 24 146 -62 27 62 0 0 chr10 11395415 11395463 -134193825 + AT_rich Low_complexity Low_complexity 1 48 0 256 264 47 9 chr10 11395709 11395815 -134193473 - L1MB8 LINE L1 -12 6166 6057 196 289 0 40 chr10 11395910 11395986 -134193302 - L2 LINE L2 -1 3271 3199 386 258 77 33 chr10 11397306 11397488 -134191800 - L2 LINE L2 -5 3308 3119 1987 143 3 16 chr10 11399053 11399368 -134189920 - AluJo SINE Alu -1 311 1 2501 108 40 3 chr10 11399695 11400046 -134189242 - THE1B LTR MaLR 0 364 1 388 356 8 0 chr10 11400450 11400568 -134188720 - L2 LINE L2 -3 3269 3151 16540 55 11 0 chr10 11402718 11406077 -134183211 - L1PA6 LINE L1 -1 6153 2766 265 275 61 30 chr10 11410379 11410510 -134178778 + L2 LINE L2 3137 3271 -1 279 293 24 49 chr10 11411624 11411747 -134177541 + MER5A DNA MER1_type 7 126 -63 308 289 10 10 chr10 11411801 11411898 -134177390 - L2 LINE L2 -3 3269 3173 2139 114 3 13 chr10 11412139 11412466 -134176822 + AluSq SINE Alu 1 313 0 24 0 0 0 chr10 11412617 11412641 -134176647 + AT_rich Low_complexity Low_complexity 1 24 0 278 315 11 0 chr10 11412841 11412930 -134176358 + (TATATG)n Simple_repeat Simple_repeat 6 95 0 393 300 110 13 chr10 11413231 11413468 -134175820 + MIR SINE MIR 3 262 0 874 177 6 12 chr10 11416056 11416220 -134173068 - FRAM SINE Alu 0 166 4 1745 171 7 7 chr10 11416552 11416845 -134172443 + AluJo SINE Alu 1 293 -19 222 299 26 13 chr10 11416877 11416954 -134172334 - L2 LINE L2 -2 3311 3234 180 0 0 0 chr10 11418209 11418229 -134171059 + (GGCTG)n Simple_repeat Simple_repeat 3 22 0 2409 61 3 3 chr10 11418229 11418522 -134170766 + AluY SINE Alu 9 301 -10 21 0 0 0 chr10 11420399 11420420 -134168868 + AT_rich Low_complexity Low_complexity 1 21 0 2054 145 7 0 chr10 11420430 11420740 -134168548 + AluJb SINE Alu 1 312 0 279 0 0 0 chr10 11424662 11424693 -134164595 + (CA)n Simple_repeat Simple_repeat 2 32 0 2033 148 3 0 chr10 11424891 11425188 -134164100 - AluSx SINE Alu -14 298 1 230 355 100 0 chr10 11428125 11428235 -134161053 + L2 LINE L2 3147 3267 -5 360 276 112 45 chr10 11432217 11432485 -134156803 + L2 LINE L2 3028 3313 0 272 347 40 8 chr10 11433386 11433510 -134155778 + L2 LINE L2 3127 3254 -18 465 296 80 0 chr10 11435993 11436155 -134153133 - MIR3 SINE MIR -4 204 30 486 179 250 0 chr10 11436313 11436425 -134152863 - MER3 DNA MER1_type -46 163 24 190 294 0 15 chr10 11437417 11437485 -134151803 + L2 LINE L2 3239 3305 -8 180 162 27 0 chr10 11438697 11438734 -134150554 - MIR SINE MIR -114 148 111 181 307 200 0 chr10 11442592 11442667 -134146621 + MIR3 SINE MIR 111 200 -8 25 0 0 0 chr10 11443084 11443109 -134146179 + AT_rich Low_complexity Low_complexity 1 25 0 641 274 28 14 chr10 11443576 11443788 -134145500 - MIR SINE MIR -14 248 34 304 324 9 19 chr10 11444797 11444902 -134144386 + MIR SINE MIR 6 109 -153 235 333 0 0 chr10 11451638 11451701 -134137587 - L2 LINE L2 -24 3248 3186 199 296 0 0 chr10 11452417 11452471 -134136817 + MIR SINE MIR 200 253 -9 183 234 85 0 chr10 11454818 11454865 -134134423 - MIR SINE MIR -112 150 100 199 329 27 0 chr10 11455400 11455473 -134133815 - L2 LINE L2 -4 3268 3194 254 314 160 0 chr10 11456101 11456295 -134132993 + MIR SINE MIR 2 226 -36 462 276 6 49 chr10 11456478 11456641 -134132647 - MIR SINE MIR 0 262 107 1971 135 4 0 chr10 11456686 11456988 -134132300 - AluSq SINE Alu 0 303 1 188 300 67 0 chr10 11457185 11457245 -134132043 + L2 LINE L2 3200 3263 -9 724 239 0 0 chr10 11458772 11458788 -134130500 - L1MA10 LINE L1 -1 6333 6318 8657 234 67 58 chr10 11458788 11460993 -134128295 - L1ME1 LINE L1 -8 6227 4045 1010 187 0 0 chr10 11460993 11461159 -134128129 - FRAM SINE Alu -12 164 1 8657 234 67 58 chr10 11461159 11461251 -134128037 - L1ME1 LINE L1 -2190 4045 3955 2139 110 4 0 chr10 11461251 11461532 -134127756 - AluSp SINE Alu -31 282 1 8657 234 67 58 chr10 11461532 11462436 -134126852 - L1ME1 LINE L1 -2280 3955 3061 1212 161 63 5 chr10 11462436 11462659 -134126629 + MER46A DNA MER2_type 1 236 0 8657 234 67 58 chr10 11462659 11463935 -134125353 - L1ME1 LINE L1 -3174 3061 1555 2299 91 3 0 chr10 11463935 11464221 -134125067 - AluSp SINE Alu -24 289 3 8657 234 67 58 chr10 11464221 11464909 -134124379 - L1ME1 LINE L1 -4680 1555 875 487 250 215 10 chr10 11464890 11465090 -134124198 - L1ME1 LINE L1 -5766 630 390 * 738 236 31 24 chr10 11465076 11465333 -134123955 - L1MEc LINE L1 -3814 2438 2183 445 240 164 0 chr10 11465355 11465501 -134123787 - L1ME1 LINE L1 -6013 383 214 243 0 0 0 chr10 11466594 11466621 -134122667 + (A)n Simple_repeat Simple_repeat 1 27 0 929 209 15 5 chr10 11466630 11466836 -134122452 + L1MB3 LINE L1 5911 6118 -65 184 211 58 0 chr10 11466906 11466958 -134122330 + MIR SINE MIR 91 145 -117 457 285 55 30 chr10 11468558 11468723 -134120565 - MER5B DNA MER1_type -3 175 7 2420 93 0 0 chr10 11469878 11470180 -134119108 - AluSc SINE Alu -7 302 1 1434 154 75 19 chr10 11472196 11472463 -134116825 + AluJo SINE Alu 1 282 -30 207 69 0 0 chr10 11472466 11472495 -134116793 + (CAAAA)n Simple_repeat Simple_repeat 3 31 0 2248 77 0 11 chr10 11472495 11472913 -134116375 + AluSg SINE Alu 4 418 0 442 311 29 66 chr10 11476966 11477207 -134112081 - MLT1J2 LTR MaLR -118 332 101 459 0 0 0 chr10 11478533 11478584 -134110704 + (TC)n Simple_repeat Simple_repeat 2 52 0 189 0 0 0 chr10 11478583 11478604 -134110684 + (TG)n Simple_repeat Simple_repeat 2 22 0 * 299 321 18 0 chr10 11479657 11479769 -134109519 - MER94 DNA DNA -19 115 2 3340 152 27 55 chr10 11483928 11484599 -134104689 - MER39B LTR ERV1 0 653 2 544 153 0 10 chr10 11486556 11486654 -134102634 + L1MA4A LINE L1 6207 6303 0 1481 204 7 14 chr10 11486709 11487003 -134102285 + AluJo SINE Alu 1 292 -20 393 158 0 0 chr10 11487468 11487569 -134101719 + (TG)n Simple_repeat Simple_repeat 2 102 0 189 0 0 0 chr10 11488450 11488471 -134100817 + (T)n Simple_repeat Simple_repeat 1 21 0 1698 167 17 10 chr10 11489714 11490007 -134099281 + AluJo SINE Alu 1 295 -17 420 354 13 0 chr10 11490146 11490304 -134098984 + MER91A DNA MER1_type 15 174 -22 302 282 0 13 chr10 11498511 11498589 -134090699 - L2 LINE L2 0 3313 3237 297 314 41 59 chr10 11502759 11502917 -134086371 - MIR SINE MIR -62 146 31 387 0 0 0 chr10 11503183 11503226 -134086062 + (CA)n Simple_repeat Simple_repeat 1 43 0 225 263 95 21 chr10 11504993 11505088 -134084200 - MIR SINE MIR -2 260 159 243 0 0 0 chr10 11505456 11505483 -134083805 + (A)n Simple_repeat Simple_repeat 1 27 0 452 263 39 58 chr10 11505754 11505910 -134083378 - MIR3 SINE MIR -35 173 21 736 178 33 44 chr10 11506396 11506517 -134082771 + MER5B DNA MER1_type 1 121 -57 1999 124 24 0 chr10 11506517 11506808 -134082480 - AluSx SINE Alu -14 298 1 736 178 33 44 chr10 11506808 11506866 -134082422 + MER5B DNA MER1_type 121 178 0 285 207 23 58 chr10 11507011 11507098 -134082190 + MER5A DNA MER1_type 31 114 -75 505 192 75 11 chr10 11507109 11507235 -134082053 + L1MA9 LINE L1 6152 6288 -3 956 128 19 162 chr10 11508719 11508985 -134080303 - LOR1-int LTR ERV1 -3623 4497 4270 2028 25 0 0 chr10 11508999 11509235 -134080053 - L1PA4 LINE L1 -2 6153 5918 363 336 52 19 chr10 11510362 11510573 -134078715 + L2 LINE L2 2105 2322 -992 259 304 0 14 chr10 11511278 11511347 -134077941 + L2 LINE L2 3204 3271 -1 2341 66 7 0 chr10 11511406 11511707 -134077581 + AluY SINE Alu 1 303 -8 389 340 58 5 chr10 11511927 11512123 -134077165 - MIR SINE MIR -41 221 16 203 152 22 0 chr10 11512127 11512173 -134077115 + A-rich Low_complexity Low_complexity 2 48 0 264 184 0 103 chr10 11513659 11513746 -134075542 + MER116 DNA Mariner 3 80 0 207 375 109 3 chr10 11513901 11514186 -134075102 - L2 LINE L2 -448 2866 2552 322 175 0 0 chr10 11514876 11514933 -134074355 - MADE1 DNA Mariner -23 57 1 189 0 0 0 chr10 11516179 11516200 -134073088 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 1840 112 29 4 chr10 11516785 11517063 -134072225 + AluSq SINE Alu 6 290 -23 432 174 20 10 chr10 11517927 11518025 -134071263 + MIR SINE MIR 39 137 -125 2013 134 0 0 chr10 11518207 11518499 -134070789 - AluSx SINE Alu -20 292 1 2272 70 0 20 chr10 11521371 11521672 -134067616 + AluY SINE Alu 1 295 -16 214 355 59 67 chr10 11521692 11522083 -134067205 + L2 LINE L2 2853 3240 -32 275 303 133 30 chr10 11522890 11523055 -134066233 + MIR3 SINE MIR 4 185 -23 212 186 17 0 chr10 11525408 11525467 -134063821 + CT-rich Low_complexity Low_complexity 2 61 0 27 0 0 0 chr10 11525621 11525648 -134063640 + AT_rich Low_complexity Low_complexity 1 27 0 573 282 60 13 chr10 11525701 11525850 -134063438 - MIR SINE MIR -50 212 57 241 241 56 0 chr10 11525880 11525934 -134063354 - MIR SINE MIR -188 74 18 589 192 75 0 chr10 11527233 11527353 -134061935 + FLAM_A SINE Alu 8 136 -6 242 297 0 0 chr10 11527548 11527612 -134061676 - L2 LINE L2 -21 3292 3229 185 275 94 56 chr10 11527693 11527853 -134061435 + MIR SINE MIR 97 262 0 261 0 0 0 chr10 11528354 11528383 -134060905 + (T)n Simple_repeat Simple_repeat 1 29 0 557 257 28 110 chr10 11528685 11528903 -134060385 + MIR SINE MIR 46 245 -17 221 0 0 33 chr10 11530994 11531024 -134058264 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 216 235 0 0 chr10 11531961 11532029 -134057259 + CT-rich Low_complexity Low_complexity 1 68 0 347 336 22 0 chr10 11532849 11532983 -134056305 - MIR3 SINE MIR -52 156 20 365 179 64 0 chr10 11533253 11533331 -134055957 - Charlie5 DNA MER1_type -2503 109 27 21 0 0 0 chr10 11533657 11533678 -134055610 + AT_rich Low_complexity Low_complexity 1 21 0 838 311 135 39 chr10 11537499 11538037 -134051251 - L3 LINE CR1 -214 1363 761 189 0 0 0 chr10 11538037 11538058 -134051230 + (TG)n Simple_repeat Simple_repeat 2 22 0 838 311 135 39 chr10 11538058 11538111 -134051177 - L3 LINE CR1 -816 761 715 330 267 81 34 chr10 11538135 11538338 -134050950 - MIR SINE MIR -26 236 18 299 247 43 54 chr10 11538365 11538458 -134050830 + L2 LINE L2 3220 3311 -2 686 328 109 40 chr10 11538531 11538927 -134050361 - L3 LINE CR1 -1082 495 73 21 0 0 0 chr10 11539224 11539245 -134050043 + AT_rich Low_complexity Low_complexity 1 21 0 1987 155 3 18 chr10 11539521 11539863 -134049425 + MER1B DNA MER1_type 1 337 0 1908 133 0 37 chr10 11540032 11540355 -134048933 - AluSx SINE Alu -1 311 1 24 32 0 0 chr10 11543060 11543091 -134046197 + AT_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr10 11543455 11543477 -134045811 + AT_rich Low_complexity Low_complexity 1 22 0 351 0 0 0 chr10 11546477 11546516 -134042772 + (A)n Simple_repeat Simple_repeat 1 39 0 514 184 0 10 chr10 11547068 11547166 -134042122 - FLAM_A SINE Alu -11 131 35 22 0 0 0 chr10 11548429 11548451 -134040837 + AT_rich Low_complexity Low_complexity 1 22 0 1919 100 4 0 chr10 11550469 11550738 -134038550 + AluSc SINE Alu 1 270 -39 204 67 0 0 chr10 11603849 11603879 -133985409 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 31 0 0 0 chr10 11607588 11607619 -133981669 + AT_rich Low_complexity Low_complexity 1 31 0 189 0 0 0 chr10 11608017 11608038 -133981250 + (ATTG)n Simple_repeat Simple_repeat 3 23 0 536 266 130 11 chr10 11612173 11612357 -133976931 + MIR SINE MIR 4 209 -53 415 248 50 8 chr10 11613286 11613407 -133975881 + L2 LINE L2 3136 3261 -11 186 302 94 19 chr10 11614087 11614193 -133975095 - L2 LINE L2 0 3313 3200 489 204 148 28 chr10 11615481 11615623 -133973665 + MIR SINE MIR 13 171 -91 361 296 77 18 chr10 11617926 11618095 -133971193 - MIR SINE MIR -16 246 68 333 199 244 23 chr10 11619235 11619366 -133969922 + MER53 DNA DNA 23 182 -7 * 455 164 109 18 chr10 11619272 11619382 -133969906 - MER53 DNA DNA -69 120 1 1163 203 135 34 chr10 11619699 11620088 -133969200 - MER66A LTR ERV1 -50 445 97 1945 158 11 29 chr10 11620126 11620409 -133968879 - MER66A-int LTR ERV1 0 6676 6399 2366 95 7 0 chr10 11620409 11620705 -133968583 + AluSp SINE Alu 4 301 -12 1945 158 11 29 chr10 11620705 11620770 -133968518 - MER66A-int LTR ERV1 -277 6399 6334 971 180 71 38 chr10 11620864 11621075 -133968213 - MER66A-int LTR ERV1 -1848 4828 4611 476 194 78 10 chr10 11621163 11621266 -133968022 - MER4D LTR ERV1 -711 161 52 8033 190 94 66 chr10 11621266 11621633 -133967655 - MER66A-int LTR ERV1 -2239 4437 4082 2339 113 19 19 chr10 11621633 11621997 -133967291 - THE1B LTR MaLR 0 364 1 8033 190 94 66 chr10 11621997 11623677 -133965611 - MER66A-int LTR ERV1 -2594 4082 2333 7728 203 68 43 chr10 11623662 11624211 -133965077 - MER66A-int LTR ERV1 -4507 2169 1635 * 1721 171 20 7 chr10 11624211 11624504 -133964784 - AluJo SINE Alu -15 297 1 7728 203 68 43 chr10 11624504 11625371 -133963917 - MER66A-int LTR ERV1 -5041 1635 690 1668 172 59 0 chr10 11625371 11625644 -133963644 + AluSg SINE Alu 1 289 -21 7728 203 68 43 chr10 11625644 11626151 -133963137 - MER66A-int LTR ERV1 -5986 690 197 1480 178 93 77 chr10 11626327 11626794 -133962494 - MER66A LTR ERV1 0 478 97 228 250 0 0 chr10 11627019 11627071 -133962217 + MIR SINE MIR 72 123 -139 592 152 163 20 chr10 11627412 11627584 -133961704 + MER66A LTR ERV1 97 217 -261 378 42 0 0 chr10 11627990 11628038 -133961250 + (TG)n Simple_repeat Simple_repeat 2 49 0 2151 146 0 3 chr10 11628428 11628737 -133960551 - AluSx SINE Alu -4 308 1 182 323 62 21 chr10 11628879 11628975 -133960313 - L2 LINE L2 -15 3298 3199 26 0 0 0 chr10 11629924 11629950 -133959338 + AT_rich Low_complexity Low_complexity 1 26 0 779 196 0 7 chr10 11630211 11630359 -133958929 - MLT1D LTR MaLR 0 505 359 228 318 47 64 chr10 11630416 11630560 -133958728 + L1MD1 LINE L1 5506 5646 -2162 2285 116 0 0 chr10 11630560 11630861 -133958427 + AluSx SINE Alu 1 301 -11 228 318 47 64 chr10 11630861 11630952 -133958336 + L1MD1 LINE L1 5646 5737 -2071 1669 165 62 24 chr10 11630966 11631257 -133958031 + AluJo SINE Alu 1 302 -10 474 287 126 18 chr10 11631586 11631809 -133957479 + MIR SINE MIR 16 262 0 194 298 134 72 chr10 11631813 11632075 -133957213 - L2 LINE L2 -349 2965 2688 1768 193 63 30 chr10 11632075 11632501 -133956787 + L1MD1 LINE L1 5803 6242 0 2011 179 6 6 chr10 11632893 11633256 -133956032 + MLT1A1 LTR MaLR 3 365 0 287 266 84 59 chr10 11634410 11634613 -133954675 + MLT1J LTR MaLR 201 408 -103 216 111 0 0 chr10 11634638 11634674 -133954614 + (GGAA)n Simple_repeat Simple_repeat 2 37 0 290 289 112 48 chr10 11634753 11634789 -133954499 + L1ME4a LINE L1 5700 5732 -389 2107 119 0 17 chr10 11634789 11635084 -133954204 + AluSx SINE Alu 1 290 -22 290 289 112 48 chr10 11635084 11635234 -133954054 + L1ME4a LINE L1 5732 5898 -223 1875 159 43 0 chr10 11635238 11635564 -133953724 - MER47A DNA MER2_type 0 366 27 238 188 101 14 chr10 11635645 11635714 -133953574 + L1ME4a LINE L1 5951 6025 -96 2281 115 0 3 chr10 11636652 11636956 -133952332 - AluSq SINE Alu -10 303 1 3955 152 20 83 chr10 11637838 11637921 -133951367 + LTR39 LTR ERV1 1 88 -695 2166 122 3 0 chr10 11637921 11638215 -133951073 + AluSx SINE Alu 1 295 -17 3955 152 20 83 chr10 11638215 11638608 -133950680 + LTR39 LTR ERV1 88 408 -375 2255 109 0 6 chr10 11638608 11638919 -133950369 - AluSx SINE Alu -3 309 1 3955 152 20 83 chr10 11638919 11639246 -133950042 + LTR39 LTR ERV1 408 754 -29 229 402 10 0 chr10 11641304 11641406 -133947882 + L2 LINE L2 2691 2793 -521 952 205 29 9 chr10 11641677 11641887 -133947401 + MER41B LTR ERV1 422 635 0 226 295 90 0 chr10 11641960 11642082 -133947206 - MIR SINE MIR -66 142 19 2553 111 53 5 chr10 11642241 11642656 -133946632 + LTR49 LTR ERV1 1 435 -160 789 168 81 23 chr10 11643047 11643220 -133946068 + LTR49 LTR ERV1 413 595 0 2253 116 0 3 chr10 11643555 11643856 -133945432 + AluSx SINE Alu 1 300 -12 1293 132 182 23 chr10 11643918 11644176 -133945112 + AluJb SINE Alu 2 300 -2 2363 121 0 0 chr10 11644824 11645137 -133944151 - AluSq SINE Alu 0 313 1 1669 171 3 39 chr10 11645139 11645448 -133943840 - AluJo SINE Alu -9 303 6 2268 131 0 0 chr10 11645618 11645930 -133943358 - AluSx SINE Alu 0 312 1 609 274 248 20 chr10 11645985 11646169 -133943119 + L2 LINE L2 2044 2185 -1129 1755 189 7 0 chr10 11646169 11646465 -133942823 - AluJo SINE Alu -14 298 1 609 274 248 20 chr10 11646465 11646593 -133942695 + L2 LINE L2 2185 2283 -1031 2034 148 3 0 chr10 11646593 11646890 -133942398 + AluSx SINE Alu 1 298 -14 609 274 248 20 chr10 11646890 11647076 -133942212 + L2 LINE L2 2283 2657 -657 187 207 86 167 chr10 11647125 11647323 -133941965 + L2 LINE L2 2889 3070 -243 376 250 59 52 chr10 11647353 11647489 -133941799 + MER63 DNA MER1_type 1 763 -73 225 240 17 137 chr10 11647529 11647704 -133941584 + L2 LINE L2 3106 3259 -54 226 280 20 0 chr10 11647706 11647756 -133941532 + MER58A DNA MER1_type 1 51 -173 389 168 0 10 chr10 11647763 11647831 -133941457 - FLAM_A SINE Alu -11 122 66 329 140 0 18 chr10 11647988 11648045 -133941243 - FLAM_A SINE Alu -71 61 6 740 250 44 0 chr10 11648046 11648226 -133941062 + MER58A DNA MER1_type 37 224 0 268 167 0 0 chr10 11648235 11648283 -133941005 + L2 LINE L2 3263 3310 -3 228 162 0 0 chr10 11648336 11648373 -133940915 - MLT1A1 LTR MaLR 0 374 338 1094 151 6 45 chr10 11648373 11648552 -133940736 + FAM SINE Alu 1 172 -13 1403 205 33 45 chr10 11648552 11648889 -133940399 - MLT1A1 LTR MaLR -32 333 1 352 327 39 6 chr10 11649105 11649261 -133940027 - MIR SINE MIR -79 183 23 2349 117 0 9 chr10 11649741 11650057 -133939231 - AluSq SINE Alu 0 313 1 390 213 11 21 chr10 11650268 11650362 -133938926 - MER5B DNA MER1_type -85 93 1 213 211 0 58 chr10 11650362 11650397 -133938891 - MIR3 SINE MIR -51 157 126 438 254 50 40 chr10 11650721 11650871 -133938417 + MIR SINE MIR 39 188 -49 289 349 0 0 chr10 11650973 11651082 -133938206 - MIR SINE MIR -69 139 31 2366 106 0 6 chr10 11651179 11651491 -133937797 - AluSg SINE Alu 0 310 1 1001 23 78 0 chr10 11652010 11652138 -133937150 - MER85 DNA T2_type -1 138 1 233 265 15 0 chr10 11652305 11652373 -133936915 + MIR SINE MIR 76 144 -64 221 306 54 18 chr10 11652642 11652753 -133936535 - L2 LINE L2 -509 2805 2691 402 244 0 0 chr10 11653609 11653687 -133935601 + MER21B LTR ERV1 13 90 -773 1921 216 91 93 chr10 11653709 11653946 -133935342 + MER21B LTR ERV1 19 255 -608 1477 200 11 0 chr10 11653946 11654211 -133935077 + AluJb SINE Alu 16 283 -29 1921 216 91 93 chr10 11654211 11654750 -133934538 + MER21B LTR ERV1 255 794 -69 234 359 114 5 chr10 11654917 11655101 -133934187 + L3 LINE CR1 1303 1506 -71 321 300 36 36 chr10 11655160 11655300 -133933988 + MIR3 SINE MIR 42 181 -27 1843 183 7 13 chr10 11655300 11655600 -133933688 - AluJb SINE Alu -14 298 1 1196 192 9 18 chr10 11656952 11657171 -133932117 - AluJo SINE Alu -95 217 1 1555 206 44 3 chr10 11657199 11657538 -133931750 - MLT1A1 LTR MaLR 0 365 13 2076 130 33 25 chr10 11658286 11658647 -133930641 - THE1B LTR MaLR 0 364 1 2221 115 7 0 chr10 11660078 11660374 -133928914 - AluSx SINE Alu -14 298 1 252 209 77 11 chr10 11661768 11661859 -133927429 + GA-rich Low_complexity Low_complexity 1 97 0 2273 118 0 3 chr10 11661895 11662209 -133927079 + AluSq SINE Alu 1 313 0 4057 143 9 6 chr10 11663221 11663872 -133925416 + MER39B LTR ERV1 1 653 0 2128 77 46 82 chr10 11664165 11664393 -133924895 + L1MA2 LINE L1 5927 6137 -167 2148 131 3 0 chr10 11664393 11664684 -133924604 + AluSx SINE Alu 1 292 -20 2128 77 46 82 chr10 11664684 11664847 -133924441 + L1MA2 LINE L1 6137 6304 0 2233 128 32 11 chr10 11664939 11665315 -133923973 - MLT1B LTR MaLR -4 386 3 1855 135 44 101 chr10 11665358 11665565 -133923723 - THE1B LTR MaLR 0 364 188 2344 119 0 0 chr10 11665565 11665877 -133923411 + AluSq SINE Alu 1 312 -1 1855 135 44 101 chr10 11665877 11666055 -133923233 - THE1B LTR MaLR -176 188 1 5155 102 10 0 chr10 11667064 11667776 -133921512 + LTR30 LTR ERV1 2 720 -2 1991 126 7 10 chr10 11667776 11668100 -133921188 + AluSx SINE Alu 10 332 0 214 167 0 0 chr10 11668303 11668339 -133920949 + (TGAA)n Simple_repeat Simple_repeat 1 36 0 256 241 218 30 chr10 11669794 11669927 -133919361 + MIR3 SINE MIR 10 167 -41 316 224 17 60 chr10 11671564 11671680 -133917608 - L2 LINE L2 -177 3095 2985 532 227 81 86 chr10 11671973 11672204 -133917084 - L1MC5 LINE L1 -60 7901 7670 2256 118 0 0 chr10 11672204 11672500 -133916788 + AluSx SINE Alu 2 297 -15 532 227 81 86 chr10 11672500 11673204 -133916084 - L1MC5 LINE L1 -291 7670 6780 416 363 18 6 chr10 11673341 11673509 -133915779 + MIR SINE MIR 24 193 -69 379 385 0 6 chr10 11674174 11674411 -133914877 + (TG)n Simple_repeat Simple_repeat 1 235 0 2079 154 59 77 chr10 11675626 11675845 -133913443 + MER31A LTR ERV1 1 222 -263 3421 121 31 13 chr10 11675845 11676398 -133912890 + L1MA2 LINE L1 5741 6303 -1 2079 154 59 77 chr10 11676398 11676672 -133912616 + MER31A LTR ERV1 222 485 0 7926 21 0 0 chr10 11676847 11677965 -133911323 + L1PA3 LINE L1 5038 6155 0 1065 163 102 0 chr10 11678865 11679061 -133910227 - AluJo SINE Alu -10 302 87 214 184 20 0 chr10 11679166 11679215 -133910073 + GA-rich Low_complexity Low_complexity 1 50 0 745 149 51 93 chr10 11679502 11679577 -133909711 + ORSL DNA AcHobo 42 119 -156 1764 132 106 0 chr10 11679577 11679842 -133909446 - AluSx SINE Alu -19 293 1 745 149 51 93 chr10 11679842 11679980 -133909308 + ORSL DNA AcHobo 119 246 -29 709 249 24 6 chr10 11680014 11680179 -133909109 + MER5B DNA MER1_type 8 175 -3 2134 143 13 28 chr10 11680474 11680521 -133908767 - L1MB3 LINE L1 -28 6155 6109 2388 133 34 0 chr10 11680521 11680873 -133908415 + THE1B LTR MaLR 1 364 0 2134 143 13 28 chr10 11680873 11681218 -133908070 - L1MB3 LINE L1 -74 6109 5769 291 268 42 0 chr10 11681224 11681295 -133907993 + L2 LINE L2 3216 3289 -24 1803 195 0 0 chr10 11681819 11682116 -133907172 - AluJo SINE Alu -8 304 8 892 201 6 11 chr10 11682173 11682352 -133906936 - AluJo SINE Alu -91 221 44 201 209 47 0 chr10 11683208 11683251 -133906037 + (CATG)n Simple_repeat Simple_repeat 3 47 0 24 0 0 0 chr10 11683332 11683356 -133905932 + AT_rich Low_complexity Low_complexity 1 24 0 3422 176 39 41 chr10 11684023 11684642 -133904646 + L1 LINE L1 4513 5130 -1038 2171 133 0 0 chr10 11684642 11684957 -133904331 + AluSx SINE Alu 1 315 0 3422 176 39 41 chr10 11684957 11685254 -133904034 + L1 LINE L1 5130 5426 -742 300 235 0 29 chr10 11685256 11685324 -133903964 - L1ME LINE L1 -287 5834 5769 633 221 61 22 chr10 11685334 11685515 -133903773 + LTR41 LTR ERVL 1 188 -585 252 265 8 51 chr10 11685926 11686043 -133903245 + LTR41 LTR ERVL 656 767 -6 1176 100 0 0 chr10 11686242 11686392 -133902896 - AluSg/x SINE Alu -9 301 152 303 327 73 27 chr10 11686402 11686552 -133902736 - MIR SINE MIR -63 199 43 534 251 121 103 chr10 11687070 11687277 -133902011 + MLT1J LTR MaLR 6 208 -303 2475 86 3 0 chr10 11687277 11687578 -133901710 - AluSg SINE Alu -8 302 1 534 251 121 103 chr10 11687578 11687865 -133901423 + MLT1J LTR MaLR 208 509 -2 430 278 28 45 chr10 11687909 11688085 -133901203 + MIR SINE MIR 35 207 -55 366 234 170 18 chr10 11688517 11688688 -133900600 + MIR SINE MIR 44 240 -22 4162 156 17 57 chr10 11688693 11689009 -133900279 + L1MCa LINE L1 202 529 -5897 1662 151 80 37 chr10 11689009 11689056 -133900232 + MER47A DNA MER2_type 1 45 -2278 2309 112 0 13 chr10 11689056 11689370 -133899918 - AluSx SINE Alu -2 310 1 1662 151 80 37 chr10 11689370 11689673 -133899615 + MER47A DNA MER2_type 45 366 0 4162 156 17 57 chr10 11689673 11690134 -133899154 + L1MCa LINE L1 529 943 -5483 1933 117 32 58 chr10 11690134 11690442 -133898846 + AluSq SINE Alu 1 300 -13 4162 156 17 57 chr10 11690442 11690542 -133898746 + L1MCa LINE L1 943 1045 -5381 2266 166 29 45 chr10 11690536 11690751 -133898537 + L1MCa LINE L1 1713 1930 -4496 * 2217 117 0 13 chr10 11690751 11691050 -133898238 - AluSq SINE Alu -18 295 1 2266 166 29 45 chr10 11691050 11691066 -133898222 + L1MCa LINE L1 1930 1945 -4481 2224 112 7 3 chr10 11691066 11691360 -133897928 - AluSq SINE Alu -18 295 1 2266 166 29 45 chr10 11691360 11691615 -133897673 + L1MCa LINE L1 1945 2192 -4234 8077 240 33 18 chr10 11691619 11691863 -133897425 + L1MCa LINE L1 2278 2517 -3909 3254 142 19 0 chr10 11691863 11692378 -133896910 - L1PA16 LINE L1 0 6166 5642 8077 240 33 18 chr10 11692378 11694447 -133894841 + L1MCa LINE L1 2517 4639 -1787 1916 104 8 0 chr10 11694447 11694696 -133894592 + AluSg SINE Alu 46 296 -14 8077 240 33 18 chr10 11694696 11694980 -133894308 + L1MCa LINE L1 4639 4917 -1509 1727 173 22 0 chr10 11694989 11695266 -133894022 + AluJo SINE Alu 9 291 -21 189 94 0 0 chr10 11695267 11695299 -133893989 + (GGAA)n Simple_repeat Simple_repeat 4 35 0 679 287 83 63 chr10 11695388 11696166 -133893122 - L1MC5 LINE L1 -924 6884 6112 600 306 93 38 chr10 11696188 11696277 -133893011 - MER115 DNA AcHobo -9 684 601 2105 139 0 3 chr10 11696277 11696572 -133892716 - AluSx SINE Alu -18 294 1 600 306 93 38 chr10 11696572 11696946 -133892342 - MER115 DNA AcHobo -92 601 140 423 0 0 0 chr10 11697125 11697172 -133892116 + (CA)n Simple_repeat Simple_repeat 2 48 0 1085 184 14 0 chr10 11698891 11699098 -133890190 - Tigger1 DNA MER2_type 0 2418 2209 691 175 0 113 chr10 11699119 11699279 -133890009 - Tigger1 DNA MER2_type -2276 142 1 2194 105 9 6 chr10 11699289 11699620 -133889668 - THE1B LTR MaLR -30 427 1 337 265 32 91 chr10 11699752 11699971 -133889317 + MLT1L LTR MaLR 112 391 -194 1972 152 11 55 chr10 11699981 11700194 -133889094 - MLT1A1 LTR MaLR 0 365 175 2462 97 0 0 chr10 11700194 11700503 -133888785 - AluSx SINE Alu -3 309 1 1972 152 11 55 chr10 11700503 11700671 -133888617 - MLT1A1 LTR MaLR -190 175 1 2384 113 0 3 chr10 11701578 11701887 -133887401 - AluSx SINE Alu -4 308 1 419 177 0 0 chr10 11702398 11702477 -133886811 - LTR41 LTR ERVL -638 135 57 1383 210 66 17 chr10 11703341 11703689 -133885599 + MLT1A1 LTR MaLR 1 365 0 184 265 0 20 chr10 11705364 11705413 -133883875 - MIR SINE MIR -113 149 102 1782 186 0 17 chr10 11705424 11705719 -133883569 + AluJo SINE Alu 1 290 -22 962 185 6 12 chr10 11705731 11705893 -133883395 + AluJb SINE Alu 136 296 -16 2260 105 7 20 chr10 11706122 11706427 -133882861 - AluSg SINE Alu -9 301 1 1690 146 64 11 chr10 11706589 11706869 -133882419 + AluJo SINE Alu 1 295 -17 488 143 154 0 chr10 11707394 11707485 -133881803 + MLT1F LTR MaLR 438 542 0 618 221 70 47 chr10 11707492 11707705 -133881583 - LTR37B LTR ERV1 -53 415 198 461 276 76 0 chr10 11707820 11707965 -133881323 - MER20 DNA MER1_type -63 156 1 335 194 15 0 chr10 11707965 11708027 -133881261 - LTR37B LTR ERV1 -348 120 58 1418 162 164 55 chr10 11708028 11708411 -133880877 - MER61B LTR ERV1 0 425 1 292 286 0 0 chr10 11708427 11708504 -133880784 + MER34 LTR ERV1 3 79 -463 1728 202 139 92 chr10 11708765 11709489 -133879799 - LTR19C LTR ERV1 -15 764 7 373 293 49 24 chr10 11709554 11709677 -133879611 + MER34 LTR ERV1 388 513 -29 2198 120 3 0 chr10 11709720 11710021 -133879267 - AluSx SINE Alu -10 302 1 313 281 16 49 chr10 11711605 11711790 -133877498 + (TAGA)n Simple_repeat Simple_repeat 2 180 0 * 321 319 25 12 chr10 11711767 11711930 -133877358 + (TGGA)n Simple_repeat Simple_repeat 2 166 0 2896 103 11 3 chr10 11711930 11712540 -133876748 - PABL_A LTR ERV1 0 660 1 275 275 28 21 chr10 11712572 11712714 -133876574 + (TAGA)n Simple_repeat Simple_repeat 4 146 0 3361 152 30 22 chr10 11713533 11714163 -133875125 + MER41B LTR ERV1 1 635 0 1648 169 17 7 chr10 11714917 11715219 -133874069 - MER47A DNA MER2_type -3 363 59 3279 174 121 37 chr10 11715219 11715995 -133873293 + MER21B LTR ERV1 20 860 -3 581 296 66 8 chr10 11716037 11716294 -133872994 - MER5C DNA MER1_type -51 273 2 301 204 144 68 chr10 11716348 11716480 -133872808 - MER103 DNA DNA -8 158 17 256 257 40 3 chr10 11717783 11717876 -133871412 + MLT1H1 LTR MaLR 180 278 -289 274 247 28 62 chr10 11717924 11717970 -133871318 + C-rich Low_complexity Low_complexity 2 48 -125 218 81 27 0 chr10 11717970 11718007 -133871281 + (CCCCAG)n Simple_repeat Simple_repeat 2 39 0 274 247 28 62 chr10 11718007 11718138 -133871150 + C-rich Low_complexity Low_complexity 48 173 0 316 294 143 0 chr10 11718638 11718757 -133870531 + MIR SINE MIR 121 256 -6 1974 133 6 19 chr10 11718758 11719073 -133870215 - AluJo SINE Alu 0 312 2 816 292 104 14 chr10 11719105 11719985 -133869303 + L2 LINE L2 2328 3297 -16 506 66 0 13 chr10 11719985 11720061 -133869227 + (GGGA)n Simple_repeat Simple_repeat 3 77 0 347 283 26 0 chr10 11721807 11721920 -133867368 + MER5A DNA MER1_type 9 124 -65 222 288 27 14 chr10 11722613 11722686 -133866602 - L2 LINE L2 -541 2773 2700 2326 96 16 0 chr10 11722777 11723080 -133866208 - AluSx SINE Alu -4 308 1 1361 89 68 11 chr10 11724285 11724475 -133864813 - AluSc SINE Alu -9 300 100 460 253 74 32 chr10 11725531 11725721 -133863567 - L1MC4a LINE L1 -1910 5898 5701 841 110 0 0 chr10 11725722 11725831 -133863457 + AluSg/x SINE Alu 188 296 -16 1802 155 0 14 chr10 11726482 11726772 -133862516 + AluJo SINE Alu 1 286 -26 337 216 31 0 chr10 11726782 11726879 -133862409 - MER5B DNA MER1_type -78 100 1 1752 159 0 4 chr10 11726907 11727177 -133862111 - AluSx SINE Alu -43 269 1 195 235 147 0 chr10 11727973 11728041 -133861247 - MIR SINE MIR -65 197 120 312 163 38 38 chr10 11728043 11728123 -133861165 + L2 LINE L2 3193 3272 -41 274 282 51 8 chr10 11728239 11728356 -133860932 - MIR SINE MIR -57 151 30 3456 199 123 5 chr10 11728827 11730364 -133858924 + L1MB8 LINE L1 4369 6173 -5 767 269 67 0 chr10 11730378 11730601 -133858687 + MIR SINE MIR 24 261 -1 373 274 11 0 chr10 11731658 11731753 -133857535 - MER5B DNA MER1_type -56 122 27 2184 109 0 53 chr10 11731945 11732267 -133857021 + AluSx SINE Alu 1 305 -7 2299 79 0 0 chr10 11732807 11733084 -133856204 - AluSc SINE Alu -24 285 9 293 82 20 0 chr10 11733942 11733991 -133855297 + (TA)n Simple_repeat Simple_repeat 1 50 0 313 339 25 0 chr10 11737510 11737631 -133851657 - L2 LINE L2 -503 2811 2688 322 223 122 50 chr10 11737772 11737911 -133851377 - MIR SINE MIR -107 155 7 246 314 81 8 chr10 11737913 11738037 -133851251 - L2 LINE L2 -745 2569 2437 249 33 0 0 chr10 11738929 11738959 -133850329 + (CTG)n Simple_repeat Simple_repeat 1 30 0 245 273 250 8 chr10 11739554 11739686 -133849602 - L3 LINE CR1 -466 1111 948 317 292 174 14 chr10 11739740 11739959 -133849329 + MIR SINE MIR 9 262 0 1638 207 36 3 chr10 11739967 11740301 -133848987 - MER7A DNA MER2_type 0 346 4 324 339 122 11 chr10 11740331 11740520 -133848768 - L3 LINE CR1 -752 825 616 302 284 147 37 chr10 11740523 11740741 -133848547 + L1ME LINE L1 5254 5495 -2313 335 230 51 2 chr10 11740746 11740841 -133848447 + L1ME LINE L1 5614 5701 -420 389 351 98 21 chr10 11741276 11741612 -133847676 - L3 LINE CR1 -1080 497 136 2400 75 7 3 chr10 11744240 11744546 -133844742 + AluY SINE Alu 1 307 -4 5615 51 21 4 chr10 11744600 11745312 -133843976 + L1PA5 LINE L1 5430 6153 -1 262 207 189 9 chr10 11746966 11747077 -133842211 + MIR SINE MIR 24 154 -108 397 224 31 141 chr10 11748491 11748657 -133840631 + L1MC4 LINE L1 7016 7129 -913 2184 83 57 17 chr10 11748657 11748958 -133840330 + AluSp SINE Alu 1 313 0 397 224 31 141 chr10 11748958 11749124 -133840164 + L1MC4 LINE L1 7129 7312 -730 28 29 0 0 chr10 11749124 11749159 -133840129 + AT_rich Low_complexity Low_complexity 1 35 0 241 270 0 0 chr10 11749303 11749366 -133839922 + L1MC4 LINE L1 7498 7560 -482 244 155 24 107 chr10 11749712 11749796 -133839492 + L1MC5 LINE L1 7837 7913 -48 260 240 8 48 chr10 11749833 11749958 -133839330 + L1ME4a LINE L1 5963 6082 -39 2252 124 0 0 chr10 11750197 11750503 -133838785 - AluSx SINE Alu -6 306 1 438 323 152 28 chr10 11750521 11751265 -133838023 + L1M4 LINE L1 3154 3989 -2157 1752 154 0 4 chr10 11751973 11752239 -133837049 + AluJb SINE Alu 19 283 -29 2380 100 0 0 chr10 11752898 11753207 -133836081 - AluY SINE Alu -2 309 1 261 276 198 9 chr10 11753507 11753623 -133835665 + MIR SINE MIR 123 260 -2 24 67 0 0 chr10 11753763 11753808 -133835480 + AT_rich Low_complexity Low_complexity 1 45 0 258 341 19 23 chr10 11754570 11754730 -133834558 + MIR SINE MIR 1 146 -62 311 255 20 20 chr10 11755979 11756081 -133833207 - L1ME LINE L1 -326 5795 5694 1435 157 81 7 chr10 11756187 11756480 -133832808 - L1MA8 LINE L1 0 6291 5963 810 165 11 11 chr10 11756817 11756993 -133832295 + GA-rich Low_complexity Low_complexity 1 176 0 222 255 0 0 chr10 11756995 11757042 -133832246 + G-rich Low_complexity Low_complexity 1 47 0 206 287 11 23 chr10 11757161 11757248 -133832040 + GA-rich Low_complexity Low_complexity 4 89 0 1555 157 32 21 chr10 11762462 11762743 -133826545 + AluJo SINE Alu 1 284 -28 213 108 0 0 chr10 11764874 11764911 -133824377 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 21 100 0 0 chr10 11765219 11765289 -133823999 + AT_rich Low_complexity Low_complexity 1 70 0 5077 209 53 6 chr10 11765506 11766602 -133822686 + ERVL-C1 LTR ERVL 4611 5757 -7 1286 231 33 48 chr10 11766606 11767004 -133822284 + MLT2C1 LTR ERVL 6 397 0 4919 242 100 66 chr10 11767765 11768767 -133820521 - HAL1 LINE L1 -273 2234 1267 8730 53 7 1 chr10 11768767 11769768 -133819520 - LTR13 LTR ERVK 0 1007 1 4919 242 100 66 chr10 11769768 11770922 -133818366 - HAL1 LINE L1 -1240 1267 5 180 0 0 0 chr10 11771429 11771449 -133817839 + (T)n Simple_repeat Simple_repeat 1 20 0 2379 80 0 10 chr10 11771463 11771774 -133817514 + AluY SINE Alu 1 308 -3 467 86 0 0 chr10 11772211 11772281 -133817007 + AluSp/q SINE Alu 244 313 0 26 30 0 0 chr10 11772689 11772722 -133816566 + AT_rich Low_complexity Low_complexity 1 33 0 2367 88 3 3 chr10 11772795 11773101 -133816187 + AluSg SINE Alu 1 306 -4 526 257 50 50 chr10 11773275 11773454 -133815834 + MIR SINE MIR 37 215 -47 1274 228 103 19 chr10 11774282 11774708 -133814580 + MLT1C LTR MaLR 6 467 0 342 219 0 27 chr10 11774745 11774818 -133814470 - L2 LINE L2 -1 3271 3201 2590 89 8 28 chr10 11774838 11775196 -133814092 + L1PA11 LINE L1 5824 6174 0 22 0 0 0 chr10 11775428 11775450 -133813838 + AT_rich Low_complexity Low_complexity 1 22 0 226 236 0 18 chr10 11776611 11776666 -133812622 + CT-rich Low_complexity Low_complexity 6 59 0 2533 60 0 3 chr10 11776816 11777118 -133812170 + AluY SINE Alu 1 301 -10 181 282 0 0 chr10 11778444 11778483 -133810805 - MIR SINE MIR -15 247 209 296 321 0 22 chr10 11778568 11778705 -133810583 - MIR SINE MIR -47 215 82 276 315 128 34 chr10 11779471 11779620 -133809668 - L2 LINE L2 0 3272 3110 636 267 58 33 chr10 11780122 11780362 -133808926 - MIR SINE MIR -10 252 7 226 336 45 9 chr10 11780936 11781046 -133808242 + MIR3 SINE MIR 65 178 -30 1700 151 23 33 chr10 11781197 11781501 -133807787 + AluJo SINE Alu 1 301 -11 322 226 87 52 chr10 11782453 11782568 -133806720 - MER103 DNA DNA -46 120 2 916 204 159 9 chr10 11782581 11782807 -133806481 - MIR SINE MIR 0 262 3 610 237 50 0 chr10 11783061 11783200 -133806088 - MIR SINE MIR -5 257 112 2074 222 72 59 chr10 11783221 11783902 -133805386 + Charlie1a DNA MER1_type 59 748 -707 294 336 97 17 chr10 11784054 11784292 -133804996 + MLT1K LTR MaLR 326 582 -6 27 49 0 0 chr10 11784787 11784828 -133804460 + AT_rich Low_complexity Low_complexity 1 41 0 719 264 71 9 chr10 11785307 11785519 -133803769 + MIR SINE MIR 6 230 -32 704 152 45 23 chr10 11785639 11785771 -133803517 - FRAM SINE Alu 0 40 1 248 151 68 14 chr10 11785783 11785856 -133803432 - AluS SINE Alu -222 80 4 366 304 32 8 chr10 11786215 11786340 -133802948 + MER58B DNA MER1_type 212 339 -2 567 183 89 61 chr10 11786420 11786600 -133802688 + MER20 DNA MER1_type 1 185 -34 249 321 80 7 chr10 11786703 11786840 -133802448 - MIR3 SINE MIR -58 150 4 352 271 0 0 chr10 11789292 11789377 -133799911 + MIR SINE MIR 65 149 -113 191 277 169 24 chr10 11789355 11789438 -133799850 + L3b LINE CR1 1475 1569 -14 * 23 33 0 0 chr10 11789799 11789829 -133799459 + AT_rich Low_complexity Low_complexity 1 30 0 940 206 37 5 chr10 11790433 11790622 -133798666 + MER3 DNA MER1_type 1 195 -14 957 64 0 8 chr10 11790990 11791115 -133798173 - AluY SINE Alu -13 298 175 262 259 52 9 chr10 11792236 11792352 -133796936 + L1M4 LINE L1 5228 5348 -798 2220 116 12 91 chr10 11793055 11793462 -133795826 - THE1C LTR MaLR 0 375 1 204 97 0 0 chr10 11794383 11794414 -133794874 + (CTG)n Simple_repeat Simple_repeat 3 33 0 321 304 39 0 chr10 11795950 11796052 -133793236 - MIR SINE MIR -109 153 48 212 302 127 78 chr10 11796315 11796408 -133792880 - L2 LINE L2 -477 2837 2750 1901 112 30 3 chr10 11796408 11796704 -133792584 - AluSc SINE Alu -5 304 1 212 302 127 78 chr10 11796704 11796815 -133792473 - L2 LINE L2 -564 2750 2623 678 276 92 17 chr10 11796863 11797102 -133792186 - MIR SINE MIR -1 261 5 778 115 19 0 chr10 11797270 11797374 -133791914 - AluSg/x SINE Alu -15 295 190 231 111 0 111 chr10 11797925 11797988 -133791300 + L1ME4a LINE L1 5737 5792 -2016 21 0 0 0 chr10 11798117 11798138 -133791150 + AT_rich Low_complexity Low_complexity 1 21 0 228 221 189 0 chr10 11798149 11798244 -133791044 + L1ME4a LINE L1 6008 6120 -1 522 234 14 0 chr10 11798836 11798977 -133790311 + L1MC3 LINE L1 7643 7785 0 182 375 57 0 chr10 11799019 11799107 -133790181 + L2 LINE L2 3155 3247 -25 270 265 174 45 chr10 11800329 11800461 -133788827 + L2 LINE L2 3163 3311 -2 25 75 0 0 chr10 11800676 11800729 -133788559 + AT_rich Low_complexity Low_complexity 1 53 0 10845 39 3 0 chr10 11801355 11802664 -133786624 + L1P LINE L1 1598 2910 -3236 1582 170 74 51 chr10 11803042 11803378 -133785910 + MER2 DNA MER2_type 1 344 0 733 145 94 7 chr10 11804009 11804147 -133785141 - L1MC3 LINE L1 -1003 6782 6633 879 141 0 0 chr10 11804246 11804374 -133784914 + AluSg/x SINE Alu 172 299 -11 2421 104 0 0 chr10 11805451 11805759 -133783529 + AluSx SINE Alu 1 308 -4 244 284 134 8 chr10 11805790 11805924 -133783364 - L1M4 LINE L1 -1305 4841 4691 808 196 0 0 chr10 11805948 11806081 -133783207 - FLAM_A SINE Alu -3 139 7 312 291 65 22 chr10 11806088 11806261 -133783027 - L1MCa LINE L1 -978 1809 1382 191 301 14 91 chr10 11809255 11809398 -133779890 - MIR SINE MIR -46 216 85 426 203 85 102 chr10 11809589 11809766 -133779522 + MER5B DNA MER1_type 2 175 -3 210 327 125 40 chr10 11809895 11810143 -133779145 + L2 LINE L2 2490 2758 -556 4538 78 7 0 chr10 11810930 11811479 -133777809 + MER41A LTR ERV1 1 553 -1 468 99 0 0 chr10 11812145 11812216 -133777072 + (CA)n Simple_repeat Simple_repeat 2 72 0 418 163 75 0 chr10 11812219 11812299 -133776989 + MER53 DNA DNA 101 186 -3 2262 234 102 42 chr10 11812482 11813205 -133776083 + MER21B LTR ERV1 12 778 -85 327 330 10 0 chr10 11816309 11816406 -133772882 - L2 LINE L2 -498 2816 2719 6805 39 2 164 chr10 11817073 11818259 -133771029 + L1P LINE L1 3658 4652 -1494 22 70 0 0 chr10 11818847 11818890 -133770398 + AT_rich Low_complexity Low_complexity 1 43 0 693 166 47 72 chr10 11819540 11819733 -133769555 + MER53 DNA DNA 1 188 -1 183 255 64 0 chr10 11820911 11820958 -133768330 - MIR SINE MIR -50 212 163 22 35 0 0 chr10 11821643 11821672 -133767616 + AT_rich Low_complexity Low_complexity 1 29 0 577 276 99 64 chr10 11823029 11823341 -133765947 - L2 LINE L2 -62 3251 2929 507 106 0 0 chr10 11823341 11823407 -133765881 + Alu SINE Alu 2 67 -243 240 111 0 0 chr10 11824120 11824156 -133765132 + (CAT)n Simple_repeat Simple_repeat 1 36 0 409 260 47 16 chr10 11824594 11824721 -133764567 - MIR3 SINE MIR -30 178 48 260 310 155 7 chr10 11824861 11825016 -133764272 - MER5B DNA MER1_type 0 178 1 247 296 46 37 chr10 11826732 11826840 -133762448 + MIR SINE MIR 30 138 -124 549 320 101 24 chr10 11828208 11828623 -133760665 + L1ME LINE L1 5264 5710 -411 344 310 14 125 chr10 11828649 11828946 -133760342 - L2 LINE L2 -22 3250 2987 251 191 16 0 chr10 11829312 11829375 -133759913 + G-rich Low_complexity Low_complexity 5 68 0 432 301 182 47 chr10 11830059 11830608 -133758680 + L2 LINE L2 1742 2364 -950 2221 189 62 25 chr10 11830636 11831122 -133758166 + MLT1D LTR MaLR 1 504 -1 1002 211 59 157 chr10 11831945 11832737 -133756551 - L1MC5 LINE L1 -199 7762 7048 212 305 17 0 chr10 11833890 11833949 -133755339 + MIR SINE MIR 93 152 -110 1326 156 71 212 chr10 11833978 11834544 -133754744 + MLT1E2 LTR MaLR 16 622 -4 186 222 0 56 chr10 11834815 11834869 -133754419 - L2 LINE L2 -19 3253 3203 1104 150 18 53 chr10 11837982 11838209 -133751079 - MER20 DNA MER1_type 0 219 1 537 260 164 6 chr10 11839006 11839183 -133750105 + MIR SINE MIR 46 250 -12 368 264 75 0 chr10 11839225 11839331 -133749957 - L2 LINE L2 -16 3256 3143 611 217 6 26 chr10 11839513 11839861 -133749427 + (CACCAT)n Simple_repeat Simple_repeat 1 341 0 205 311 0 0 chr10 11839890 11839951 -133749337 - MIR SINE MIR -15 247 187 347 261 188 0 chr10 11839986 11840124 -133749164 + MER5A DNA MER1_type 26 189 0 1744 129 4 7 chr10 11842571 11842842 -133746446 + AluSx SINE Alu 40 309 -3 277 219 41 27 chr10 11842903 11842976 -133746312 - Charlie8 DNA MER1_type 0 2417 2344 370 264 68 61 chr10 11843044 11843207 -133746081 - Charlie8 DNA MER1_type -2198 219 56 939 185 28 6 chr10 11843298 11843476 -133745812 + MER5A DNA MER1_type 1 182 -7 1229 189 52 8 chr10 11843492 11843741 -133745547 + MER58B DNA MER1_type 79 338 -3 319 130 0 0 chr10 11845253 11845299 -133743989 - MER53 DNA DNA -5 184 139 442 220 64 0 chr10 11845365 11845474 -133743814 - MER53 DNA DNA -73 116 1 2240 107 0 19 chr10 11845919 11846237 -133743051 + AluSx SINE Alu 1 312 0 269 285 76 57 chr10 11848916 11849074 -133740214 + MIR SINE MIR 22 182 -80 302 311 20 33 chr10 11849773 11849924 -133739364 - L2 LINE L2 -856 2458 2310 393 284 146 41 chr10 11850505 11850943 -133738345 + L2 LINE L2 2782 3259 -54 22 0 0 0 chr10 11852688 11852710 -133736578 + AT_rich Low_complexity Low_complexity 1 22 0 180 0 0 0 chr10 11852799 11852819 -133736469 + (TTAA)n Simple_repeat Simple_repeat 1 20 0 1846 125 7 0 chr10 11852821 11853121 -133736167 - AluSq SINE Alu 0 302 1 550 197 0 141 chr10 11853819 11853963 -133735325 + L1MC5 LINE L1 7753 7863 -98 216 0 0 0 chr10 11853963 11853987 -133735301 + (AATAG)n Simple_repeat Simple_repeat 2 25 0 550 197 0 141 chr10 11853987 11854040 -133735248 + L1MC5 LINE L1 7863 7922 -39 609 235 49 25 chr10 11854281 11854443 -133734845 - MER97b DNA MER1_type? -874 179 14 585 321 148 35 chr10 11854646 11855125 -133734163 - L3 LINE CR1 -323 1254 722 872 256 47 49 chr10 11855145 11855450 -133733838 + L1ME LINE L1 5474 5779 -342 1505 159 0 34 chr10 11855450 11855746 -133733542 + AluJo SINE Alu 20 305 -7 872 256 47 49 chr10 11855746 11855784 -133733504 + L1ME LINE L1 5779 5816 -305 253 333 19 0 chr10 11855808 11855916 -133733372 + L1ME LINE L1 141 250 -5955 454 258 70 65 chr10 11856324 11856553 -133732735 + L1ME LINE L1 786 1015 -5381 500 265 75 62 chr10 11856557 11856863 -133732425 + L1ME LINE L1 1027 1336 -4869 320 256 72 8 chr10 11857089 11857214 -133732074 + L1M1 LINE L1 2890 3022 -4543 313 276 26 0 chr10 11857523 11857599 -133731689 - L2 LINE L2 -2 3311 3234 347 313 40 0 chr10 11857603 11857733 -133731555 - MIR SINE MIR -63 145 5 2073 101 13 7 chr10 11857825 11858123 -133731165 - AluSx SINE Alu -12 300 1 1513 171 3 39 chr10 11858125 11858434 -133730854 - AluJo SINE Alu -9 303 6 2105 131 0 0 chr10 11858604 11858916 -133730372 - AluSx SINE Alu 0 312 1 681 275 244 28 chr10 11858971 11859155 -133730133 + L2 LINE L2 2044 2187 -1127 1596 189 7 0 chr10 11859155 11859451 -133729837 - AluJo SINE Alu -14 298 1 681 275 244 28 chr10 11859451 11859579 -133729709 + L2 LINE L2 2187 2286 -1028 1881 144 3 0 chr10 11859579 11859871 -133729417 + AluSx SINE Alu 1 293 -19 681 275 244 28 chr10 11859871 11860062 -133729226 + L2 LINE L2 2286 2657 -657 211 204 92 168 chr10 11860111 11860307 -133728981 + L2 LINE L2 2889 3069 -244 380 250 59 52 chr10 11860339 11860475 -133728813 + MER63 DNA MER1_type 1 763 -73 264 234 17 137 chr10 11860515 11860690 -133728598 + L2 LINE L2 3106 3259 -54 233 280 20 0 chr10 11860692 11860742 -133728546 + MER58A DNA MER1_type 1 51 -173 404 168 0 10 chr10 11860749 11860817 -133728471 - FLAM_A SINE Alu -11 122 66 343 140 0 18 chr10 11860974 11861031 -133728257 - FLAM_A SINE Alu -71 61 6 758 233 61 17 chr10 11861032 11861212 -133728076 + MER58A DNA MER1_type 37 224 0 281 167 0 0 chr10 11861221 11861269 -133728019 + L2 LINE L2 3263 3310 -3 237 162 0 0 chr10 11861322 11861359 -133727929 - MLT1A1 LTR MaLR 0 365 329 1004 151 6 45 chr10 11861359 11861538 -133727750 + FAM SINE Alu 1 172 -13 1455 205 33 45 chr10 11861538 11861875 -133727413 - MLT1A1 LTR MaLR -32 333 1 376 295 78 24 chr10 11862091 11862267 -133727021 - MIR SINE MIR -43 165 5 192 291 50 92 chr10 11862559 11862700 -133726588 - MIR3 SINE MIR -71 137 3 2219 117 0 9 chr10 11862727 11863043 -133726245 - AluSq SINE Alu 0 313 1 397 213 11 21 chr10 11863254 11863348 -133725940 - MER5B DNA MER1_type -85 93 1 214 211 0 58 chr10 11863348 11863383 -133725905 - MIR3 SINE MIR -51 157 126 451 281 140 0 chr10 11863693 11863857 -133725431 + MIR SINE MIR 2 188 -74 294 349 0 0 chr10 11863959 11864068 -133725220 - MIR SINE MIR -69 139 31 2229 106 0 6 chr10 11864165 11864477 -133724811 - AluSg SINE Alu 0 310 1 1065 23 78 0 chr10 11864996 11865124 -133724164 - MER85 DNA T2_type -1 138 1 245 265 15 0 chr10 11865291 11865359 -133723929 + MIR SINE MIR 76 144 -64 225 306 54 18 chr10 11865628 11865739 -133723549 - L2 LINE L2 -509 2805 2691 403 244 0 0 chr10 11866617 11866695 -133722593 + MER21B LTR ERV1 13 90 -773 911 183 125 5 chr10 11866717 11866925 -133722363 + MER21B LTR ERV1 19 251 -612 1398 196 11 0 chr10 11866954 11867219 -133722069 + AluJb SINE Alu 16 283 -29 1266 235 78 84 chr10 11867221 11867758 -133721530 + MER21B LTR ERV1 261 794 -69 256 359 114 5 chr10 11867925 11868109 -133721179 + L3 LINE CR1 1303 1506 -71 333 300 36 36 chr10 11868168 11868308 -133720980 + MIR3 SINE MIR 42 181 -27 1708 179 7 17 chr10 11868308 11868609 -133720679 - AluJb SINE Alu -14 298 1 1110 192 9 18 chr10 11869961 11870180 -133719108 - AluJo SINE Alu -95 217 1 1578 204 47 6 chr10 11870208 11870547 -133718741 - MLT1A1 LTR MaLR 0 365 13 2243 130 33 25 chr10 11871295 11871656 -133717632 - THE1B LTR MaLR 0 364 1 2097 117 7 0 chr10 11873085 11873383 -133715905 - AluSx SINE Alu -12 300 1 252 209 77 11 chr10 11874777 11874868 -133714420 + GA-rich Low_complexity Low_complexity 1 97 0 1512 105 5 5 chr10 11924935 11925144 -133664144 - AluSx SINE Alu -103 209 1 3809 148 32 22 chr10 11925144 11925724 -133663564 + Tigger1 DNA MER2_type 2 592 -1826 2105 125 24 3 chr10 11925724 11926013 -133663275 + AluSx SINE Alu 1 295 -17 3809 148 32 22 chr10 11926013 11926114 -133663174 + Tigger1 DNA MER2_type 592 690 -1728 317 225 84 0 chr10 11926103 11926174 -133663114 + Tigger1 DNA MER2_type 2121 2197 -221 * 245 218 139 10 chr10 11926405 11926506 -133662782 + HAL1b LINE L1 793 906 -442 2266 103 3 7 chr10 11927105 11927407 -133661881 - AluSp SINE Alu -12 301 1 1029 136 7 0 chr10 11927438 11927592 -133661696 - AluSg/x SINE Alu -16 294 140 1433 126 5 19 chr10 11927710 11927925 -133661363 - AluSx SINE Alu -100 212 1 1708 179 25 23 chr10 11928590 11928943 -133660345 + MLT1A1 LTR MaLR 11 364 -1 1926 123 68 3 chr10 11929703 11929996 -133659292 - AluJo SINE Alu 0 312 1 1598 184 22 7 chr10 11930622 11930899 -133658389 + AluJo SINE Alu 1 281 -31 2300 112 0 0 chr10 11930909 11931213 -133658075 + AluSx SINE Alu 1 304 -8 229 218 18 18 chr10 11932498 11932553 -133656735 - MLT1K LTR MaLR -1 587 533 1696 128 88 34 chr10 11932682 11932978 -133656310 - AluJb SINE Alu 0 312 1 1406 269 62 40 chr10 11933143 11933663 -133655625 + MER69 DNA AcHobo 1 531 -695 664 191 0 37 chr10 11933674 11933810 -133655478 + FLAM_C SINE Alu 6 136 -7 571 102 10 10 chr10 11933815 11933913 -133655375 + (GGAA)n Simple_repeat Simple_repeat 4 101 0 581 258 52 16 chr10 11933921 11934115 -133655173 + MER69 DNA AcHobo 601 801 -1725 2531 47 0 10 chr10 11935656 11935957 -133653331 + AluY SINE Alu 1 298 -13 420 35 0 0 chr10 11939045 11939102 -133650186 - AluY SINE Alu -10 300 244 858 92 0 0 chr10 11939102 11939211 -133650077 - AluY SINE Alu -138 173 65 2312 81 0 20 chr10 11939311 11939609 -133649679 - AluSc SINE Alu -17 292 1 1115 83 0 0 chr10 11939613 11939746 -133649542 - AluSq/x SINE Alu -180 133 1 843 262 116 35 chr10 11940268 11940672 -133648616 + MLT1J1 LTR MaLR 1 437 -9 227 299 114 30 chr10 11940781 11940982 -133648306 + L2 LINE L2 1728 1945 -1369 2340 100 0 0 chr10 11941388 11941688 -133647600 - AluSx SINE Alu -12 300 1 207 0 0 0 chr10 11941782 11941805 -133647483 + (T)n Simple_repeat Simple_repeat 1 23 0 2308 101 0 19 chr10 11942025 11942366 -133646922 - AluSg SINE Alu 0 310 1 298 250 43 17 chr10 11942416 11942532 -133646756 - Charlie2 DNA MER1_type -42 2820 2702 946 171 40 1 chr10 11942533 11942794 -133646494 - AluJo SINE Alu -10 302 2 258 172 0 31 chr10 11942921 11942985 -133646303 + CT-rich Low_complexity Low_complexity 1 62 0 1302 191 4 8 chr10 11943008 11943244 -133646044 - AluJo SINE Alu -77 235 1 3338 160 70 22 chr10 11943244 11943925 -133645363 + L1MCa LINE L1 482 1195 -5231 509 259 101 77 chr10 11944351 11944726 -133644562 + L1ME LINE L1 5389 5772 -349 2433 75 0 0 chr10 11944756 11945050 -133644238 + AluSc SINE Alu 1 294 -15 1063 208 48 111 chr10 11945286 11945630 -133643658 - MLT1A1 LTR MaLR 0 365 45 1758 142 53 11 chr10 11945630 11945912 -133643376 + AluJo SINE Alu 5 298 -14 1063 208 48 111 chr10 11945912 11945955 -133643333 - MLT1A1 LTR MaLR -320 45 1 180 0 0 0 chr10 11946616 11946636 -133642652 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 1595 188 7 7 chr10 11946937 11947225 -133642063 + AluJo SINE Alu 1 288 -24 2199 122 0 0 chr10 11947792 11948095 -133641193 - AluSx SINE Alu -9 303 1 377 286 18 0 chr10 11948099 11948211 -133641077 - L2 LINE L2 -239 3074 2961 410 143 13 0 chr10 11948350 11948427 -133640861 + CT-rich Low_complexity Low_complexity 1 78 0 184 231 77 0 chr10 11948619 11948671 -133640617 - L2 LINE L2 -30 3283 3228 2235 161 114 2 chr10 11949490 11949937 -133639351 + MER61D LTR ERV1 5 501 0 251 340 0 0 chr10 11949944 11950038 -133639250 - L2 LINE L2 -45 3227 3134 2221 117 3 0 chr10 11950054 11950354 -133638934 + AluSx SINE Alu 1 301 -11 439 167 115 0 chr10 11950356 11950452 -133638836 - MLT2B2 LTR ERVL -408 107 1 269 348 32 27 chr10 11950453 11950640 -133638648 - L2 LINE L2 -460 2854 2667 241 307 91 99 chr10 11950834 11950993 -133638295 - L2 LINE L2 -453 2861 2702 2731 122 26 5 chr10 11950993 11951412 -133637876 + MSTA LTR MaLR 1 428 0 241 307 91 99 chr10 11951412 11951910 -133637378 - L2 LINE L2 -612 2702 2209 1942 157 3 0 chr10 11952231 11952531 -133636757 - AluJo SINE Alu -11 301 1 2116 90 0 11 chr10 11952668 11952947 -133636341 + AluSx SINE Alu 35 310 -2 2144 114 14 0 chr10 11953573 11953862 -133635426 - AluSq SINE Alu -18 295 3 2155 81 46 0 chr10 11954203 11954486 -133634802 + AluSc SINE Alu 1 296 -13 2279 94 7 7 chr10 11954563 11954861 -133634427 + AluSg SINE Alu 1 298 -12 2270 96 20 7 chr10 11955760 11956063 -133633225 + AluSx SINE Alu 1 307 -5 377 262 64 21 chr10 11956096 11956283 -133633005 - L2 LINE L2 -1001 2313 2119 679 255 65 56 chr10 11956304 11956626 -133632662 + Charlie2 DNA MER1_type 1 325 -2457 1657 211 41 19 chr10 11956629 11957045 -133632243 + Charlie2 DNA MER1_type 1857 2281 -581 873 191 30 81 chr10 11957045 11957160 -133632128 + L1ME1 LINE L1 5939 6037 -129 2043 150 0 0 chr10 11957160 11957460 -133631828 - AluSx SINE Alu -11 301 2 873 191 30 81 chr10 11957460 11957580 -133631708 + L1ME1 LINE L1 6037 6162 -4 697 245 126 16 chr10 11957594 11957966 -133631322 + Charlie2 DNA MER1_type 2280 2692 -170 1491 96 5 0 chr10 11957966 11958164 -133631124 - AluSg/x SINE Alu -13 299 101 21 36 0 0 chr10 11958573 11958601 -133630687 + AT_rich Low_complexity Low_complexity 1 28 0 2374 92 0 0 chr10 11958706 11959001 -133630287 + AluSg SINE Alu 1 295 -15 460 237 124 12 chr10 11959065 11959234 -133630054 + L1ME3A LINE L1 5680 5867 -303 191 128 51 0 chr10 11960063 11960102 -133629186 + (CATA)n Simple_repeat Simple_repeat 2 42 0 22 56 0 0 chr10 11960395 11960431 -133628857 + AT_rich Low_complexity Low_complexity 1 36 0 368 257 73 0 chr10 11960455 11960564 -133628724 - L2 LINE L2 0 3313 3197 1181 145 67 0 chr10 11960663 11960856 -133628432 + MER46A DNA MER2_type 31 236 0 396 257 3 25 chr10 11962018 11962153 -133627135 + MIR SINE MIR 59 186 -61 355 278 126 17 chr10 11962523 11962753 -133626535 - MARNA DNA Mariner -198 388 134 531 151 315 0 chr10 11962839 11962985 -133626303 - MER44D DNA MER2_type -147 462 1 554 261 77 72 chr10 11963652 11964408 -133624880 + L1MEd LINE L1 860 1669 -4641 1991 143 10 0 chr10 11964807 11965107 -133624181 - AluSx SINE Alu -9 303 1 926 196 0 6 chr10 11965406 11965574 -133623714 + AluJb SINE Alu 131 297 -15 204 274 48 83 chr10 11966337 11966505 -133622783 + L2 LINE L2 2917 3078 -194 181 229 0 49 chr10 11966569 11966630 -133622658 + L2 LINE L2 3251 3308 -5 1958 139 0 7 chr10 11966924 11967240 -133622048 - AluSx SINE Alu 0 314 1 23 68 0 0 chr10 11969038 11969082 -133620206 + GC_rich Low_complexity Low_complexity 1 44 0 24 67 0 0 chr10 11969241 11969286 -133620002 + GC_rich Low_complexity Low_complexity 1 45 0 185 0 0 39 chr10 11969387 11969413 -133619875 + (CGCGG)n Simple_repeat Simple_repeat 4 28 0 235 187 13 27 chr10 11969564 11969639 -133619649 + (CCG)n Simple_repeat Simple_repeat 2 75 0 477 241 55 65 chr10 11969878 11970077 -133619211 + MIR SINE MIR 12 208 -54 2268 117 0 0 chr10 11970652 11970951 -133618337 + AluSg SINE Alu 5 303 -7 1743 187 96 8 chr10 11970970 11971333 -133617955 - L1MCa LINE L1 -5929 497 103 2196 94 0 57 chr10 11972823 11973154 -133616134 + AluSx SINE Alu 1 312 0 1214 50 17 17 chr10 11973701 11973881 -133615407 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 651 33 0 13 chr10 11973881 11974030 -133615258 + (TTCC)n Simple_repeat Simple_repeat 1 147 0 291 136 23 0 chr10 11974031 11974075 -133615213 - AluS SINE Alu -26 276 232 991 113 0 0 chr10 11974084 11974217 -133615071 - AluSq/x SINE Alu -178 134 2 1203 144 24 34 chr10 11974221 11974429 -133614859 - AluSg/x SINE Alu -9 303 98 1929 150 5 48 chr10 11975189 11975255 -133614033 - L1MB8 LINE L1 -5 6173 6106 2214 113 0 10 chr10 11975255 11975557 -133613731 + AluSx SINE Alu 6 304 -8 1929 150 5 48 chr10 11975557 11975869 -133613419 - L1MB8 LINE L1 -72 6106 5811 24 32 0 0 chr10 11976359 11976390 -133612898 + AT_rich Low_complexity Low_complexity 1 31 0 1729 171 20 3 chr10 11977634 11977939 -133611349 - AluJb SINE Alu -2 310 1 2358 107 0 0 chr10 11978009 11978309 -133610979 - AluSx SINE Alu -12 300 1 433 233 44 0 chr10 11978524 11978614 -133610674 + L1MC/D LINE L1 5512 5605 -2203 374 167 0 0 chr10 11978614 11978668 -133610620 - MLT1D LTR MaLR -100 405 352 2225 114 0 0 chr10 11978700 11978990 -133610298 - AluSq SINE Alu -23 290 1 331 308 0 11 chr10 11979084 11979175 -133610113 - MER45 DNA AcHobo -1491 90 1 1057 176 0 6 chr10 11979210 11979380 -133609908 + AluSx SINE Alu 1 169 -143 375 150 0 0 chr10 11979495 11979575 -133609713 + AluSc SINE Alu 196 275 -24 2382 97 3 0 chr10 11979634 11979933 -133609355 + AluSx SINE Alu 1 300 -12 1606 203 14 35 chr10 11979936 11980237 -133609051 + MER58B DNA MER1_type 4 310 -2110 1612 163 3 63 chr10 11980237 11980366 -133608922 + AluJo SINE Alu 1 136 -167 2149 107 0 27 chr10 11980366 11980666 -133608622 - AluSc SINE Alu -17 292 1 1701 104 0 5 chr10 11980667 11980889 -133608399 - AluSg/x SINE Alu -7 303 83 1612 163 3 63 chr10 11980889 11981078 -133608210 + AluJo SINE Alu 135 303 0 1606 203 14 35 chr10 11981078 11981120 -133608168 + MER58B DNA MER1_type 310 341 0 2223 101 0 17 chr10 11981375 11981707 -133607581 - AluSx SINE Alu 0 327 1 733 318 96 35 chr10 11982675 11983342 -133605946 + L2 LINE L2 2263 2970 -344 1940 152 0 16 chr10 11983820 11984135 -133605153 + AluJo SINE Alu 1 310 -2 722 141 8 0 chr10 11984421 11984549 -133604739 + CT-rich Low_complexity Low_complexity 1 129 0 204 40 0 0 chr10 11985463 11985488 -133603800 + (CA)n Simple_repeat Simple_repeat 2 26 0 627 64 0 0 chr10 11985955 11986033 -133603255 - L1PA10 LINE L1 -512 5656 5579 * 3291 102 11 0 chr10 11986032 11986485 -133602803 + L1PA10 LINE L1 5679 6136 -32 1295 182 57 109 chr10 11987975 11988200 -133601088 - L1MA10 LINE L1 0 6334 6099 1871 152 28 7 chr10 11988200 11988490 -133600798 + AluJo SINE Alu 1 296 -16 2370 105 0 0 chr10 11988495 11988800 -133600488 + AluSc SINE Alu 1 305 -4 1295 182 57 109 chr10 11988800 11989008 -133600280 - L1MA10 LINE L1 -239 6095 5918 336 161 0 0 chr10 11990350 11990412 -133598876 + CT-rich Low_complexity Low_complexity 3 64 0 1873 138 11 0 chr10 11990415 11990691 -133598597 - AluSx SINE Alu -33 279 1 378 0 0 0 chr10 11991341 11991383 -133597905 + (T)n Simple_repeat Simple_repeat 1 42 0 997 160 19 0 chr10 11991536 11991692 -133597596 - Tigger3(Golem) DNA MER2_type -2870 159 1 242 243 0 43 chr10 11991969 11992039 -133597249 + L2 LINE L2 3201 3267 -5 1860 125 0 4 chr10 11992111 11992375 -133596913 + AluSx SINE Alu 39 301 -11 2158 141 0 3 chr10 11993504 11993816 -133595472 - AluSx SINE Alu -1 311 1 353 317 27 33 chr10 11993915 11994098 -133595190 + L2 LINE L2 3131 3312 -1 245 208 14 0 chr10 11994098 11994170 -133595118 + GA-rich Low_complexity Low_complexity 4 76 0 836 257 116 56 chr10 11994732 11995214 -133594074 + MLT1G1 LTR MaLR 83 593 -2 432 97 0 0 chr10 11995613 11995675 -133593613 + (TA)n Simple_repeat Simple_repeat 2 63 0 727 262 129 21 chr10 11995718 11995997 -133593291 + MER46C DNA MER2_type 1 309 -29 739 296 35 16 chr10 11996051 11996308 -133592980 + MIR SINE MIR 1 262 0 1390 201 92 3 chr10 11996332 11996497 -133592791 - AluJo SINE Alu -2 310 161 286 85 34 0 chr10 11996497 11996556 -133592732 + T-rich Low_complexity Low_complexity 2 62 0 1390 201 92 3 chr10 11996556 11996673 -133592615 - AluJo SINE Alu -151 161 3 2134 128 3 3 chr10 11997045 11997343 -133591945 + AluSx SINE Alu 1 298 -14 231 232 89 71 chr10 11997384 11997496 -133591792 - MLT2E LTR ERVL -477 151 38 834 227 131 65 chr10 11997687 11998176 -133591112 + MER113 DNA MER1_type? 1 521 0 5026 160 28 6 chr10 11998321 11999446 -133589842 - L1MB5 LINE L1 -8 6166 5015 2119 113 0 0 chr10 11999711 12000044 -133589244 + AluSg SINE Alu 1 333 0 323 227 0 0 chr10 12000266 12000332 -133588956 + L1MB1 LINE L1 6100 6165 -3 668 282 85 16 chr10 12000393 12000675 -133588613 + L1ME4a LINE L1 5502 5808 -313 1922 151 3 17 chr10 12000675 12000974 -133588314 + AluJb SINE Alu 1 295 -17 668 282 85 16 chr10 12000974 12000996 -133588292 + L1ME4a LINE L1 5808 5827 -294 2161 128 0 10 chr10 12000996 12001294 -133587994 + AluSx SINE Alu 1 295 -17 195 384 63 28 chr10 12001464 12001719 -133587569 + L2 LINE L2 2473 2736 -578 260 355 35 44 chr10 12002072 12002275 -133587013 + L3 LINE CR1 184 384 -1193 1952 164 0 0 chr10 12002845 12003143 -133586145 + AluSx SINE Alu 1 298 -14 2008 161 3 0 chr10 12003223 12003515 -133585773 + AluSx SINE Alu 1 293 -19 339 85 0 0 chr10 12003519 12003566 -133585722 + (TA)n Simple_repeat Simple_repeat 2 48 0 1087 238 70 45 chr10 12003700 12004099 -133585189 + MLT1I LTR MaLR 1 409 0 310 297 40 37 chr10 12004259 12004438 -133584850 + MIR SINE MIR 17 193 -63 240 303 25 8 chr10 12005143 12005265 -133584023 + L2 LINE L2 3102 3225 -88 227 182 0 0 chr10 12005290 12005334 -133583954 + Alu SINE Alu 258 301 -1 2717 32 0 0 chr10 12005373 12005683 -133583605 - AluYa5 SINE Alu -1 310 1 234 232 18 0 chr10 12005717 12005773 -133583515 + MIR SINE MIR 205 261 -1 1896 148 10 0 chr10 12005775 12006065 -133583223 - AluSx SINE Alu -19 293 1 1703 219 152 20 chr10 12006083 12006577 -133582711 - L1MC4 LINE L1 -1 8041 7483 2338 84 3 0 chr10 12006905 12007238 -133582050 - AluSp SINE Alu 0 334 1 2229 112 3 10 chr10 12007238 12007542 -133581746 - AluSx SINE Alu -9 303 1 264 243 0 0 chr10 12007548 12007622 -133581666 + CT-rich Low_complexity Low_complexity 5 78 0 3191 178 122 6 chr10 12007878 12008553 -133580735 + L1MB7 LINE L1 5415 6167 -17 2305 104 0 7 chr10 12008915 12009224 -133580064 + AluSg SINE Alu 1 307 -3 521 198 0 0 chr10 12009596 12009697 -133579591 + L1M3 LINE L1 5605 5705 -466 757 115 0 0 chr10 12009697 12009834 -133579454 - AluSg/x SINE Alu 0 306 170 1101 159 18 36 chr10 12010253 12010473 -133578815 + AluJo SINE Alu 84 299 -13 4509 192 28 24 chr10 12010488 12010936 -133578352 - L1MB2 LINE L1 -2 6169 5724 2188 113 0 0 chr10 12010936 12011220 -133578068 + AluSx SINE Alu 1 284 -28 4509 192 28 24 chr10 12011220 12012370 -133576918 - L1MB2 LINE L1 -447 5724 4564 452 139 139 0 chr10 12012470 12012549 -133576739 - MLT1B LTR MaLR -300 90 1 5355 221 17 19 chr10 12012549 12013920 -133575368 - L1MB2 LINE L1 -2050 4096 2729 926 243 87 33 chr10 12014072 12014348 -133574940 - MLT1J2 LTR MaLR -147 303 13 466 242 167 11 chr10 12014352 12014538 -133574750 + HAL1 LINE L1 1581 1795 -712 1878 154 18 0 chr10 12014713 12014995 -133574293 - AluJb SINE Alu -28 284 1 2479 68 0 3 chr10 12015105 12015400 -133573888 - AluY SINE Alu -17 294 1 391 318 61 98 chr10 12015441 12016001 -133573287 - LTR67 LTR ERVL -3 554 16 355 200 0 11 chr10 12016376 12016466 -133572822 + HAL1 LINE L1 2270 2358 -149 289 237 186 0 chr10 12017039 12017157 -133572131 - L1M4 LINE L1 -1698 4448 4309 201 39 0 0 chr10 12017159 12017185 -133572103 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1884 98 18 18 chr10 12017193 12017468 -133571820 - AluSx SINE Alu -32 280 6 319 100 0 0 chr10 12017468 12017508 -133571780 - Alu SINE Alu -263 40 1 1604 160 13 33 chr10 12017642 12017942 -133571346 - AluJb SINE Alu -18 294 1 463 324 14 9 chr10 12017942 12018158 -133571130 - L1M4 LINE L1 -1929 4217 4001 835 137 0 43 chr10 12018163 12018302 -133570986 + FRAM SINE Alu 33 165 -11 21 0 0 0 chr10 12018302 12018323 -133570965 + AT_rich Low_complexity Low_complexity 1 21 0 258 190 50 58 chr10 12018377 12018498 -133570790 + Charlie2 DNA MER1_type 2671 2790 -72 573 168 15 102 chr10 12018580 12018717 -133570571 - MER63 DNA MER1_type -311 751 1 346 155 138 0 chr10 12018762 12018820 -133570468 - L2 LINE L2 -3 3310 3245 183 267 70 12 chr10 12018961 12019047 -133570241 + L2 LINE L2 2697 2787 -527 195 293 173 40 chr10 12019187 12019337 -133569951 + L2 LINE L2 2932 3101 -171 532 208 96 0 chr10 12019455 12019580 -133569708 - MER58B DNA MER1_type -5 336 200 735 194 82 0 chr10 12019643 12019813 -133569475 + MER20 DNA MER1_type 36 219 0 368 276 56 47 chr10 12019985 12020240 -133569048 + L1ME4a LINE L1 5573 5833 -288 652 235 60 6 chr10 12020240 12020406 -133568882 - MER5B DNA MER1_type -1 177 3 368 276 56 47 chr10 12020406 12020472 -133568816 + L1ME4a LINE L1 5833 5897 -224 508 101 22 0 chr10 12020490 12020579 -133568709 + (TGGA)n Simple_repeat Simple_repeat 1 91 0 295 198 83 33 chr10 12020788 12020909 -133568379 - L1ME4a LINE L1 0 6121 5995 1870 127 3 35 chr10 12021438 12021614 -133567674 - AluSx SINE Alu -7 305 125 204 40 0 0 chr10 12021614 12021639 -133567649 + (TGG)n Simple_repeat Simple_repeat 1 25 0 2106 95 0 3 chr10 12021641 12021936 -133567352 - AluSq SINE Alu -19 294 1 1870 127 3 35 chr10 12021936 12022071 -133567217 - AluSx SINE Alu -188 124 1 22 56 0 0 chr10 12022684 12022720 -133566568 + AT_rich Low_complexity Low_complexity 1 36 0 2291 65 3 13 chr10 12022855 12023161 -133566127 - AluY SINE Alu -8 303 1 1947 138 0 3 chr10 12023416 12023720 -133565568 + AluSx SINE Alu 1 303 -9 845 179 26 19 chr10 12023732 12023888 -133565400 + AluJb SINE Alu 130 286 -26 1826 148 0 10 chr10 12024324 12024635 -133564653 + AluJb SINE Alu 1 308 -4 3253 151 93 63 chr10 12024826 12025112 -133564176 + L1MB2 LINE L1 5434 5710 -461 1628 94 0 4 chr10 12025112 12025346 -133563942 + AluY SINE Alu 62 294 -17 3253 151 93 63 chr10 12025346 12025769 -133563519 + L1MB2 LINE L1 5710 6164 -7 459 318 125 64 chr10 12026523 12026866 -133562422 + L2 LINE L2 2897 3260 -12 21 0 0 0 chr10 12027314 12027335 -133561953 + AT_rich Low_complexity Low_complexity 1 21 0 1187 231 73 43 chr10 12027774 12028142 -133561146 + L1MC4 LINE L1 7522 7900 -142 27 62 0 0 chr10 12028148 12028196 -133561092 + AT_rich Low_complexity Low_complexity 1 48 0 229 341 37 73 chr10 12030675 12030839 -133558449 - MIR3 SINE MIR -14 194 37 372 224 9 35 chr10 12031324 12031440 -133557848 + L1MC4 LINE L1 7929 8041 -1 24 77 0 0 chr10 12031470 12031522 -133557766 + AT_rich Low_complexity Low_complexity 1 52 0 2050 106 7 7 chr10 12031549 12031842 -133557446 - AluSx SINE Alu -19 293 1 287 204 224 0 chr10 12032042 12032140 -133557148 - MER20B DNA MER1_type -663 120 1 215 373 130 6 chr10 12034078 12034239 -133555049 + L2 LINE L2 2685 2865 -449 249 250 128 93 chr10 12034468 12034640 -133554648 - L2 LINE L2 -16 3297 3120 1363 136 0 5 chr10 12035231 12035445 -133553843 - AluJb SINE Alu -99 213 1 193 378 40 0 chr10 12035578 12035652 -133553636 + L2 LINE L2 3237 3313 0 1857 168 62 54 chr10 12035734 12036157 -133553131 + MSTB LTR MaLR 1 426 0 1719 136 4 0 chr10 12038301 12038558 -133550730 + AluSx SINE Alu 35 292 -20 620 112 19 47 chr10 12039039 12039146 -133550142 + FLAM_C SINE Alu 8 111 -32 243 0 0 0 chr10 12039388 12039415 -133549873 + (TTG)n Simple_repeat Simple_repeat 1 27 0 256 204 19 0 chr10 12039867 12039921 -133549367 - L2 LINE L2 -1 3271 3217 1725 160 7 0 chr10 12040728 12041010 -133548278 - L1MB3 LINE L1 -329 5854 5571 3841 155 5 65 chr10 12041404 12041584 -133547704 - L1MB3 LINE L1 -1 6182 5993 2199 79 7 0 chr10 12041584 12041874 -133547414 + AluSq SINE Alu 1 292 -21 3841 155 5 65 chr10 12041874 12042355 -133546933 - L1MB3 LINE L1 -190 5993 5572 2545 42 3 3 chr10 12042355 12042666 -133546622 - AluY SINE Alu 0 311 1 3841 155 5 65 chr10 12042666 12042782 -133546506 - L1MB3 LINE L1 -611 5572 5451 2104 136 0 0 chr10 12042927 12043235 -133546053 - AluSx SINE Alu -4 308 1 201 276 0 40 chr10 12044079 12044155 -133545133 + MIR SINE MIR 82 154 -108 773 163 0 8 chr10 12044586 12044709 -133544579 + FLAM_A SINE Alu 6 127 -15 378 0 0 0 chr10 12045300 12045342 -133543946 + (TG)n Simple_repeat Simple_repeat 1 42 0 213 65 0 0 chr10 12045342 12045373 -133543915 + (GA)n Simple_repeat Simple_repeat 2 32 0 1635 140 19 0 chr10 12045373 12045630 -133543658 - AluJo SINE Alu -30 282 21 1812 187 88 78 chr10 12045879 12046392 -133542896 + MLT2B1 LTR ERVL 3 520 0 2112 108 7 0 chr10 12046718 12047023 -133542265 - AluSx SINE Alu -5 307 1 949 239 137 35 chr10 12047024 12047396 -133541892 - MLT1C LTR MaLR -52 415 6 1935 148 32 86 chr10 12047404 12047628 -133541660 - MLT1B LTR MaLR -6 384 190 1779 173 0 10 chr10 12047628 12047940 -133541348 - AluJo SINE Alu -2 310 2 1935 148 32 86 chr10 12047940 12048121 -133541167 - MLT1B LTR MaLR -200 190 1 250 163 61 0 chr10 12048254 12048303 -133540985 - MIR SINE MIR -16 246 195 508 254 6 21 chr10 12048635 12048797 -133540491 - MLT1K LTR MaLR -2 613 431 2439 60 0 0 chr10 12048797 12049095 -133540193 - AluY SINE Alu -13 298 1 480 120 8 103 chr10 12049219 12049271 -133540017 - L1MA2 LINE L1 0 6304 6249 183 100 0 0 chr10 12049271 12049301 -133539987 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 1840 106 7 14 chr10 12049301 12049584 -133539704 - AluSx SINE Alu -31 281 1 480 120 8 103 chr10 12049584 12049647 -133539641 - L1MA2 LINE L1 -53 6251 6199 595 229 137 78 chr10 12049657 12049963 -133539325 - MLT1K LTR MaLR -162 426 103 1059 203 56 141 chr10 12050176 12050708 -133538580 + MLT1D LTR MaLR 17 503 -2 1859 234 139 63 chr10 12051038 12051201 -133538087 + L2 LINE L2 1818 1967 -1346 1850 141 20 0 chr10 12051201 12051498 -133537790 - AluSx SINE Alu -9 303 1 1859 234 139 63 chr10 12051498 12052071 -133537217 + L2 LINE L2 1967 2495 -818 1663 143 55 10 chr10 12052071 12052364 -133536924 - AluSx SINE Alu -6 306 1 1859 234 139 63 chr10 12052364 12052381 -133536907 + L2 LINE L2 2495 2509 -804 1659 160 29 13 chr10 12052381 12052694 -133536594 - L1MB4 LINE L1 0 6180 5863 1859 234 139 63 chr10 12052694 12053318 -133535970 + L2 LINE L2 2509 3309 -4 782 189 52 0 chr10 12053377 12053530 -133535758 - AluJo SINE Alu -149 163 3 842 196 12 0 chr10 12053562 12053725 -133535563 + AluJb SINE Alu 137 301 -11 258 304 11 43 chr10 12053750 12053842 -133535446 + MER5B DNA MER1_type 87 175 -3 429 298 76 18 chr10 12054214 12054385 -133534903 - MIR SINE MIR -73 189 9 2039 119 3 6 chr10 12054567 12054878 -133534410 + AluSx SINE Alu 3 312 0 1274 176 0 52 chr10 12054881 12055131 -133534157 + MLT1B LTR MaLR 1 237 -153 463 289 24 10 chr10 12055362 12055549 -133533739 + L1MA4A LINE L1 5686 5877 -295 2019 108 7 3 chr10 12055549 12055837 -133533451 + AluSx SINE Alu 1 289 -23 463 289 24 10 chr10 12055837 12055866 -133533422 + L1MA4A LINE L1 5877 5904 -268 1096 153 0 0 chr10 12055890 12056053 -133533235 - AluJb SINE Alu -15 297 135 625 311 48 9 chr10 12056258 12056486 -133532802 - MIR SINE MIR -24 238 2 1965 102 0 20 chr10 12056842 12057135 -133532153 - AluSx SINE Alu -17 295 9 385 349 40 21 chr10 12057146 12057379 -133531909 - MIR SINE MIR -25 237 1 353 173 25 25 chr10 12057624 12057705 -133531583 + MER5B DNA MER1_type 25 105 -73 1928 142 0 19 chr10 12057723 12058034 -133531254 - AluSx SINE Alu -7 305 1 1639 157 7 7 chr10 12058042 12058329 -133530959 - AluJb SINE Alu -25 287 1 2007 119 0 3 chr10 12058388 12058682 -133530606 - AluSg1 SINE Alu -16 293 1 2019 151 7 62 chr10 12058703 12059107 -133530181 + MLT1B LTR MaLR 1 382 -8 251 344 0 0 chr10 12059378 12059468 -133529820 + GA-rich Low_complexity Low_complexity 2 91 0 301 291 52 37 chr10 12060159 12060293 -133528995 - MIR3 SINE MIR -4 204 69 444 328 47 81 chr10 12060417 12060798 -133528490 + L2 LINE L2 2902 3269 -3 655 196 159 0 chr10 12060848 12060986 -133528302 + FRAM SINE Alu 9 168 -8 2666 78 33 19 chr10 12061055 12061258 -133528030 - THE1B LTR MaLR 0 364 152 2210 103 0 3 chr10 12061258 12061558 -133527730 + AluSc SINE Alu 2 300 -9 2666 78 33 19 chr10 12061558 12061713 -133527575 - THE1B LTR MaLR -212 152 1 804 131 0 36 chr10 12062171 12062308 -133526980 - FRAM SINE Alu -5 171 40 2031 120 13 0 chr10 12063357 12063534 -133525754 - AluSx SINE Alu -7 305 121 230 0 33 0 chr10 12063534 12063564 -133525724 + (TTTTA)n Simple_repeat Simple_repeat 2 32 0 2031 120 13 0 chr10 12063564 12063687 -133525601 - AluSx SINE Alu -191 121 1 520 195 49 41 chr10 12063688 12063811 -133525477 - L2 LINE L2 -3 3310 3187 790 135 0 0 chr10 12064492 12064603 -133524685 - FLAM_C SINE Alu -31 112 2 703 244 80 19 chr10 12064611 12064824 -133524464 - MLT1C LTR MaLR 0 467 242 2184 89 3 7 chr10 12064898 12065200 -133524088 - AluSp SINE Alu -6 307 7 1913 141 3 7 chr10 12065314 12065612 -133523676 - AluJb SINE Alu -15 297 1 407 262 10 0 chr10 12065674 12065777 -133523511 + L1ME LINE L1 5606 5709 -412 27 49 0 0 chr10 12065914 12065955 -133523333 + AT_rich Low_complexity Low_complexity 1 41 0 192 40 0 0 chr10 12066185 12066210 -133523078 + (CA)n Simple_repeat Simple_repeat 2 26 0 1781 167 0 17 chr10 12066660 12066954 -133522334 + AluJo SINE Alu 24 312 0 2452 77 3 6 chr10 12067054 12067366 -133521922 - AluY SINE Alu 0 311 1 23 0 0 0 chr10 12067526 12067549 -133521739 + GC_rich Low_complexity Low_complexity 1 23 0 593 279 101 68 chr10 12068530 12068686 -133520602 - L2 LINE L2 -6 3307 3158 2419 77 0 3 chr10 12068686 12068986 -133520302 + AluSq SINE Alu 1 299 -14 593 279 101 68 chr10 12068986 12069227 -133520061 - L2 LINE L2 -155 3158 2897 1596 161 58 33 chr10 12069236 12069500 -133519788 + L1MA9 LINE L1 5976 6251 -61 2027 160 0 3 chr10 12069500 12069806 -133519482 + AluJo SINE Alu 1 305 -7 1596 161 58 33 chr10 12069806 12069870 -133519418 + L1MA9 LINE L1 6251 6312 0 293 291 168 16 chr10 12069875 12070184 -133519104 - L2 LINE L2 -411 2903 2548 2579 130 59 17 chr10 12070894 12071303 -133517985 - MSTB LTR MaLR 0 426 1 1435 239 30 16 chr10 12071475 12071844 -133517444 + MER87 LTR ERV1 168 541 0 637 226 155 11 chr10 12071844 12072025 -133517263 - MIR SINE MIR -4 258 52 7174 168 149 52 chr10 12072093 12073692 -133515596 + MER52A LTR ERV1 1 1755 0 811 239 56 17 chr10 12073698 12073932 -133515356 + L2 LINE L2 2432 2674 -640 41772 31 21 1 chr10 12073933 12079962 -133509326 - L1PA2 LINE L1 -1 6154 4 654 90 0 0 chr10 12079982 12080071 -133509217 - THE1B-int LTR MaLR -1183 397 309 518 136 12 0 chr10 12080075 12080156 -133509132 - THE1B LTR MaLR -83 281 200 1064 279 72 16 chr10 12080157 12080707 -133508581 + L2 LINE L2 2661 3311 -2 290 279 95 34 chr10 12080683 12080829 -133508459 - MIR SINE MIR -60 148 18 * 1694 161 3 27 chr10 12081039 12081331 -133507957 - AluJo SINE Alu -21 291 7 2172 149 33 30 chr10 12081426 12081789 -133507499 - THE1B LTR MaLR 0 364 1 2337 105 0 0 chr10 12082169 12082464 -133506824 - AluSx SINE Alu -17 295 1 34 0 0 0 chr10 12082923 12082957 -133506331 + AT_rich Low_complexity Low_complexity 1 34 0 2387 79 0 3 chr10 12083814 12084106 -133505182 - AluSx SINE Alu -21 291 1 484 152 7 7 chr10 12084765 12084903 -133504385 + (CGGGG)n Simple_repeat Simple_repeat 4 141 0 23 0 0 0 chr10 12085198 12085221 -133504067 + GC_rich Low_complexity Low_complexity 1 23 0 513 229 125 85 chr10 12085793 12086169 -133503119 - MER115 DNA AcHobo -27 666 276 354 253 112 54 chr10 12086622 12086831 -133502457 - MIR SINE MIR -35 227 8 183 306 357 11 chr10 12087158 12087615 -133501673 - L2 LINE L2 -722 2592 1978 2402 105 0 0 chr10 12088571 12088876 -133500412 + AluSq SINE Alu 6 310 -3 1723 73 21 59 chr10 12088876 12089162 -133500126 + L1MA2 LINE L1 6029 6303 -1 1836 110 4 0 chr10 12089174 12089410 -133499878 + AluSq SINE Alu 1 237 -76 1655 142 8 0 chr10 12090746 12090986 -133498302 - AluJo SINE Alu -10 302 61 252 66 0 131 chr10 12090990 12091051 -133498237 - AluJo SINE Alu -151 151 99 2175 138 0 0 chr10 12091124 12091429 -133497859 + AluSx SINE Alu 1 305 -7 223 250 117 0 chr10 12091515 12091575 -133497713 + MIR3 SINE MIR 126 192 -16 2592 83 0 0 chr10 12092304 12092616 -133496672 - AluSx SINE Alu 0 312 1 199 266 125 31 chr10 12093123 12093187 -133496101 - L2 LINE L2 -2 3270 3201 217 222 0 0 chr10 12093292 12093337 -133495951 + (TTCA)n Simple_repeat Simple_repeat 4 48 0 2241 109 0 26 chr10 12094636 12094940 -133494348 - AluSx SINE Alu -16 296 1 346 262 115 16 chr10 12094951 12095142 -133494146 - L1ME4a LINE L1 -9 6112 5903 864 246 75 0 chr10 12095165 12095364 -133493924 - MIR SINE MIR -17 245 32 302 232 116 39 chr10 12095464 12095619 -133493669 - L1ME4a LINE L1 -355 5766 5600 2159 120 7 7 chr10 12095619 12095911 -133493377 + AluSx SINE Alu 1 292 -20 1822 134 0 22 chr10 12096283 12096552 -133492736 - AluSx SINE Alu 0 312 50 2150 121 7 16 chr10 12097559 12097864 -133491424 + AluSx SINE Alu 1 302 -10 2107 102 49 0 chr10 12099271 12099555 -133489733 - AluSx SINE Alu -14 298 1 1814 178 13 45 chr10 12101437 12101591 -133487697 + MLT1A1 LTR MaLR 1 158 -207 2414 99 0 3 chr10 12101591 12101904 -133487384 + AluSq SINE Alu 1 312 -1 1814 178 13 45 chr10 12101904 12102126 -133487162 + MLT1A1 LTR MaLR 158 365 0 477 280 140 26 chr10 12102337 12102530 -133486758 - MIR SINE MIR -12 250 36 199 227 23 0 chr10 12103527 12103571 -133485717 - MIR3 SINE MIR -48 160 116 230 228 8 126 chr10 12103641 12103727 -133485561 + L2 LINE L2 2141 2209 -1105 933 203 47 33 chr10 12103727 12103939 -133485349 + MER20 DNA MER1_type 3 217 -2 230 228 8 126 chr10 12103939 12103979 -133485309 + L2 LINE L2 2209 2252 -1062 575 208 69 27 chr10 12104035 12104340 -133484948 - MLT1G3 LTR MaLR -82 513 154 903 304 59 33 chr10 12104375 12104471 -133484817 - L2 LINE L2 -1 3312 3220 867 173 0 0 chr10 12104471 12104604 -133484684 + FLAM_C SINE Alu 1 133 0 903 304 59 33 chr10 12104604 12104964 -133484324 - L2 LINE L2 -93 3220 2844 2197 95 14 7 chr10 12106831 12107127 -133482161 + AluSx SINE Alu 1 298 -14 297 340 118 13 chr10 12107614 12107767 -133481521 - MIR SINE MIR -37 225 57 2107 151 3 0 chr10 12108869 12109174 -133480114 - AluJo SINE Alu -2 310 5 387 200 0 0 chr10 12109178 12109253 -133480035 - L1M4 LINE L1 -1502 4644 4570 629 276 63 57 chr10 12109307 12109815 -133479473 - L1MC4 LINE L1 -29 8013 7503 1184 148 40 20 chr10 12109985 12110187 -133479101 + AluJo SINE Alu 85 290 -22 1871 216 100 42 chr10 12110201 12110260 -133479028 - MLT1E LTR MaLR -4 589 535 2427 88 0 0 chr10 12110260 12110567 -133478721 - AluY SINE Alu -4 307 1 1871 216 100 42 chr10 12110567 12111057 -133478231 - MLT1E LTR MaLR -58 535 8 343 293 39 14 chr10 12111081 12111298 -133477990 + MLT1L LTR MaLR 359 605 -10 2335 93 0 7 chr10 12111480 12111780 -133477508 + AluSx SINE Alu 1 298 -14 1539 130 0 9 chr10 12112090 12112313 -133476975 + AluSg/x SINE Alu 65 285 -27 312 255 11 64 chr10 12112313 12112407 -133476881 - L1MC4 LINE L1 -1340 6702 6614 2956 196 19 21 chr10 12112827 12112951 -133476337 - L1MB8 LINE L1 -5 6173 6050 2362 112 0 0 chr10 12112951 12113256 -133476032 + AluSx SINE Alu 1 305 -7 2956 196 19 21 chr10 12113256 12113749 -133475539 - L1MB8 LINE L1 -128 6050 5557 2636 64 0 0 chr10 12113840 12114151 -133475137 - AluY SINE Alu 0 311 1 458 188 18 27 chr10 12114501 12114613 -133474675 - MER113 DNA MER1_type? -410 111 1 1073 152 53 6 chr10 12114648 12114819 -133474469 - AluSx SINE Alu -133 179 1 266 211 0 35 chr10 12115068 12115125 -133474163 - L2 LINE L2 -14 3299 3245 224 284 187 15 chr10 12115244 12115378 -133473910 + MIR SINE MIR 36 192 -70 312 273 153 6 chr10 12115671 12115847 -133473441 + LTR16C LTR ERVL 286 487 -4 1731 165 26 0 chr10 12116972 12117244 -133472044 - AluJb SINE Alu -12 300 22 2478 94 3 0 chr10 12117253 12117561 -133471727 - AluSp SINE Alu -4 309 1 2274 123 0 0 chr10 12117642 12117934 -133471354 - AluSx SINE Alu -20 292 1 501 228 48 42 chr10 12117958 12118147 -133471141 - L1MC5 LINE L1 -36 7925 7736 1176 257 76 5 chr10 12118665 12119035 -133470253 + MER20B DNA MER1_type 32 427 -356 1907 135 19 62 chr10 12119057 12119382 -133469906 - AluJb SINE Alu -1 311 1 364 203 60 53 chr10 12119499 12119632 -133469656 + MER20B DNA MER1_type 475 608 -175 360 269 111 0 chr10 12119682 12119790 -133469498 + HAL1 LINE L1 835 954 -1553 1781 148 81 0 chr10 12119791 12120062 -133469226 - AluJo SINE Alu -19 293 1 1284 60 0 0 chr10 12120079 12120228 -133469060 + AluSc SINE Alu 152 300 -9 226 217 43 22 chr10 12120313 12120405 -133468883 + (TA)n Simple_repeat Simple_repeat 1 94 0 634 256 154 11 chr10 12120431 12120670 -133468618 + HAL1 LINE L1 1096 1384 -1123 2361 98 7 0 chr10 12120670 12120975 -133468313 + AluSq SINE Alu 1 307 -6 634 256 154 11 chr10 12120975 12121020 -133468268 + HAL1 LINE L1 1384 1421 -1086 465 232 167 18 chr10 12121414 12121582 -133467706 + LTR16C LTR ERVL 299 491 0 2518 104 25 6 chr10 12121585 12121940 -133467348 - THE1B LTR MaLR -2 362 1 841 93 0 0 chr10 12122459 12122567 -133466721 + AluSg/x SINE Alu 192 299 -13 1082 199 0 15 chr10 12122577 12122783 -133466505 + AluJo SINE Alu 86 288 -24 2099 128 0 0 chr10 12122819 12123100 -133466188 + AluSx SINE Alu 20 300 -12 793 156 0 22 chr10 12123195 12123330 -133465958 + FLAM_C SINE Alu 2 133 -10 1783 198 73 22 chr10 12123335 12123744 -133465544 - MLT2B1 LTR ERVL -90 430 1 2057 115 0 4 chr10 12124107 12124386 -133464902 - AluSx SINE Alu -34 278 1 1511 151 55 19 chr10 12124468 12124762 -133464526 - AluJo SINE Alu 0 313 10 2400 76 0 0 chr10 12124783 12125072 -133464216 - AluSx SINE Alu -19 293 5 622 218 140 10 chr10 12125684 12125877 -133463411 - MER20B DNA MER1_type -1 218 1 349 209 19 57 chr10 12126540 12126645 -133462643 - ORSL DNA AcHobo -2 273 173 25 51 0 0 chr10 12126926 12126965 -133462323 + AT_rich Low_complexity Low_complexity 1 39 0 1669 198 63 11 chr10 12127161 12127525 -133461763 - MLT1B LTR MaLR -4 386 4 2236 113 0 3 chr10 12127880 12128182 -133461106 - AluSx SINE Alu -11 301 1 213 308 119 21 chr10 12128436 12128579 -133460709 + L2 LINE L2 2949 3105 -208 2252 105 0 40 chr10 12128585 12128908 -133460380 - AluSx SINE Alu -2 310 1 2452 92 0 0 chr10 12129193 12129496 -133459792 + AluSg SINE Alu 1 303 -7 429 150 25 0 chr10 12129662 12129742 -133459546 + AluS SINE Alu 230 311 -1 308 329 76 32 chr10 12129743 12129901 -133459387 - L2 LINE L2 -2813 501 337 1098 252 77 9 chr10 12129926 12130275 -133459013 - MER93b LTR ERV1 0 373 1 201 158 0 0 chr10 12130383 12130421 -133458867 + (CAGAGA)n Simple_repeat Simple_repeat 2 39 0 1676 204 6 28 chr10 12130923 12131241 -133458047 - AluJb SINE Alu -1 311 1 243 258 189 45 chr10 12131503 12131635 -133457653 + MER5A DNA MER1_type 1 151 -38 192 200 0 0 chr10 12131680 12131720 -133457568 + (CATATA)n Simple_repeat Simple_repeat 2 41 0 21 0 0 0 chr10 12132703 12132724 -133456564 + AT_rich Low_complexity Low_complexity 1 21 0 710 126 4 6 chr10 12132740 12132979 -133456309 + AluJo SINE Alu 10 296 -16 319 206 34 137 chr10 12133000 12133088 -133456200 - MIR3 SINE MIR -65 143 74 1678 234 91 34 chr10 12133088 12133191 -133456097 - MLT1D LTR MaLR -3 502 406 1729 180 42 0 chr10 12133191 12133474 -133455814 + AluJb SINE Alu 1 295 -17 1678 234 91 34 chr10 12133474 12133844 -133455444 - MLT1D LTR MaLR -99 406 2 319 206 34 137 chr10 12133844 12133901 -133455387 - MIR3 SINE MIR -134 74 13 599 156 200 15 chr10 12134255 12134390 -133454898 - MER4C LTR ERV1 0 465 306 1973 113 40 0 chr10 12134390 12134665 -133454623 + AluSx SINE Alu 1 286 -26 1894 117 22 104 chr10 12134727 12135063 -133454225 - MER4A LTR ERV1 -239 425 63 8409 54 4 4 chr10 12135063 12136070 -133453218 + LTR13 LTR ERVK 1 1007 0 591 15 0 0 chr10 12136080 12136148 -133453140 + (TTTTC)n Simple_repeat Simple_repeat 2 69 0 1894 117 22 104 chr10 12136148 12136263 -133453025 - MER4A LTR ERV1 -610 54 1 1771 95 61 23 chr10 12136795 12137059 -133452229 + AluSq SINE Alu 32 305 -8 849 129 117 37 chr10 12137243 12137332 -133451956 + MER45A DNA AcHobo 2 82 -1499 1783 153 24 7 chr10 12137332 12137627 -133451661 - AluJb SINE Alu -12 300 1 849 129 117 37 chr10 12137627 12137700 -133451588 + MER45A DNA AcHobo 82 177 -1 651 233 6 0 chr10 12137833 12138215 -133451073 + (CA)n Simple_repeat Simple_repeat 1 384 0 1917 145 30 0 chr10 12138373 12138669 -133450619 + AluJo SINE Alu 1 305 -7 339 289 39 78 chr10 12138999 12139179 -133450109 - L1M4 LINE L1 -6294 561 91 1900 131 20 33 chr10 12139276 12139581 -133449707 - AluJo SINE Alu -9 303 3 442 331 7 15 chr10 12140188 12140324 -133448964 + MIR3 SINE MIR 15 149 -59 404 194 0 14 chr10 12140331 12140403 -133448885 + AluJ/FLAM SINE Alu 2 72 -240 279 107 133 67 chr10 12140403 12140478 -133448810 + LTR8A LTR ERV1 489 568 -159 1785 159 0 28 chr10 12140615 12140928 -133448360 + AluJo SINE Alu 1 305 0 2315 102 3 3 chr10 12140966 12141269 -133448019 + AluSx SINE Alu 1 303 -9 1534 93 9 26 chr10 12141768 12141994 -133447294 - AluJo SINE Alu -90 222 1 2282 112 3 3 chr10 12142796 12143100 -133446188 - AluSg SINE Alu -6 304 1 798 148 33 0 chr10 12143100 12143222 -133446066 - FLAM_A SINE Alu -7 126 1 2538 51 0 7 chr10 12143237 12143532 -133445756 - AluY SINE Alu -18 293 1 417 223 58 58 chr10 12143533 12143721 -133445567 - L1ME3A LINE L1 -222 5948 5761 432 132 7 176 chr10 12143888 12143980 -133445308 + MLT1B LTR MaLR 3 109 -281 2018 108 11 0 chr10 12143980 12144258 -133445030 - AluSp SINE Alu -10 303 23 432 132 7 176 chr10 12144258 12144293 -133444995 + MLT1B LTR MaLR 109 109 -281 2761 132 26 0 chr10 12144293 12144716 -133444572 + L1PB3 LINE L1 5721 6154 0 25 65 0 0 chr10 12144723 12144769 -133444519 + AT_rich Low_complexity Low_complexity 1 46 0 1223 185 82 4 chr10 12144910 12145185 -133444103 + MLT1B LTR MaLR 95 396 0 416 276 86 33 chr10 12145186 12145396 -133443892 - L1ME3A LINE L1 -617 5547 5327 259 313 31 0 chr10 12145412 12145508 -133443780 - L1ME3A LINE L1 -860 5286 5188 564 55 0 0 chr10 12145515 12145588 -133443700 - L1PA5 LINE L1 -3 6151 6079 1996 125 14 17 chr10 12145600 12145888 -133443400 - AluSx SINE Alu -25 287 1 684 290 164 53 chr10 12145888 12145989 -133443299 - L1ME3A LINE L1 -1369 4777 4689 3564 119 29 2 chr10 12145989 12146500 -133442788 - MER1A DNA MER1_type -1 526 2 684 290 164 53 chr10 12146500 12146867 -133442421 - L1ME3A LINE L1 -1457 4689 4257 1023 145 63 26 chr10 12146867 12147153 -133442135 - MLT2A2 LTR ERVL 0 453 259 1114 158 20 184 chr10 12148407 12148749 -133440539 + AluJo SINE Alu 2 287 -15 21 0 0 0 chr10 12149811 12149832 -133439456 + AT_rich Low_complexity Low_complexity 1 21 0 2350 106 0 0 chr10 12149922 12150224 -133439064 - AluSx SINE Alu -10 302 1 476 257 54 13 chr10 12151552 12151700 -133437588 + MIR SINE MIR 41 197 -63 2372 95 3 3 chr10 12151960 12152266 -133437022 - AluSx SINE Alu -6 306 1 2476 73 3 0 chr10 12152309 12152610 -133436678 - AluY SINE Alu -9 302 1 1996 153 0 3 chr10 12152732 12153039 -133436249 - AluJb SINE Alu -6 306 1 2249 99 17 0 chr10 12154255 12154548 -133434740 - AluSx SINE Alu -14 298 1 3490 186 29 17 chr10 12154563 12154989 -133434299 + L1MB3 LINE L1 5476 5915 -268 2363 119 0 0 chr10 12154989 12155301 -133433987 + AluSx SINE Alu 1 312 0 3490 186 29 17 chr10 12155301 12155574 -133433714 + L1MB3 LINE L1 5915 6183 0 666 221 97 51 chr10 12156127 12156344 -133432944 + MLT1E1 LTR MaLR 1 227 -427 2285 95 0 0 chr10 12157472 12157756 -133431532 + AluSx SINE Alu 1 284 -28 237 323 30 30 chr10 12158078 12158177 -133431111 + L2 LINE L2 3144 3242 -30 2150 122 0 29 chr10 12158183 12158495 -133430793 - AluSq SINE Alu 0 313 11 2089 109 0 32 chr10 12158883 12159194 -133430094 - AluSx SINE Alu -1 311 11 873 201 13 0 chr10 12159312 12159471 -133429817 + AluJb SINE Alu 139 299 -13 2262 113 7 0 chr10 12159572 12159873 -133429415 + AluSq SINE Alu 1 303 -10 683 267 119 52 chr10 12159915 12160105 -133429183 - L1ME4a LINE L1 -77 6044 5868 2310 111 0 0 chr10 12160105 12160402 -133428886 - AluSx SINE Alu -15 297 1 683 267 119 52 chr10 12160402 12160706 -133428582 - L1ME4a LINE L1 -253 5868 5517 2181 107 0 7 chr10 12160711 12161009 -133428279 + AluSc SINE Alu 1 296 -13 2111 124 0 3 chr10 12161018 12161321 -133427967 + AluSx SINE Alu 1 302 0 23 33 0 0 chr10 12161405 12161435 -133427853 + AT_rich Low_complexity Low_complexity 1 30 0 309 339 96 28 chr10 12161744 12161802 -133427486 - L1ME4a LINE L1 -1059 5087 5034 1840 163 3 10 chr10 12161802 12162097 -133427191 - AluJb SINE Alu -13 299 7 309 339 96 28 chr10 12162097 12162256 -133427032 - L1ME4a LINE L1 -1112 5034 4855 290 257 54 0 chr10 12162448 12162522 -133426766 - MIR SINE MIR -89 173 96 2471 32 3 3 chr10 12162685 12162989 -133426299 - AluY SINE Alu 0 304 1 26 0 0 0 chr10 12163189 12163215 -133426073 + AT_rich Low_complexity Low_complexity 1 26 0 270 309 60 0 chr10 12163340 12163489 -133425799 - AluSp SINE Alu -49 254 97 2112 126 20 0 chr10 12163841 12164134 -133425154 - AluSx SINE Alu -13 299 1 208 322 8 25 chr10 12164406 12164527 -133424761 + CT-rich Low_complexity Low_complexity 4 122 0 1753 154 34 17 chr10 12164682 12164975 -133424313 + AluJo SINE Alu 1 298 -14 185 229 0 115 chr10 12165405 12165466 -133423822 + MIR SINE MIR 93 146 -116 307 247 103 10 chr10 12165714 12165811 -133423477 + MIR SINE MIR 98 203 -59 1760 157 0 52 chr10 12165933 12166239 -133423049 + AluJb SINE Alu 1 290 -22 22 56 0 0 chr10 12167592 12167628 -133421660 + AT_rich Low_complexity Low_complexity 1 36 0 3858 172 30 46 chr10 12169041 12169731 -133419557 - L1MB5 LINE L1 0 6174 5474 231 103 0 0 chr10 12169731 12169770 -133419518 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 2245 78 0 11 chr10 12169770 12170054 -133419234 - AluY SINE Alu -30 281 1 2053 150 0 3 chr10 12170054 12170354 -133418934 - AluJb SINE Alu -7 305 7 3858 172 30 46 chr10 12170354 12170509 -133418779 - L1MB5 LINE L1 -697 5477 5341 1896 161 3 0 chr10 12170857 12171142 -133418146 - AluJo SINE Alu -16 296 11 371 287 88 15 chr10 12171240 12171376 -133417912 + MIR3 SINE MIR 32 177 -31 2265 99 0 3 chr10 12171594 12171902 -133417386 + AluSx SINE Alu 1 307 0 243 339 61 57 chr10 12171949 12172194 -133417094 - L2 LINE L2 -59 3213 2968 1950 139 10 0 chr10 12172479 12172767 -133416521 + AluJo SINE Alu 3 293 -19 2183 126 3 0 chr10 12173010 12173312 -133415976 - AluSx SINE Alu -4 308 6 2398 167 19 19 chr10 12173317 12173790 -133415498 - L1PB4 LINE L1 -118 6038 5566 40 0 0 0 chr10 12175164 12175204 -133414084 + AT_rich Low_complexity Low_complexity 1 40 0 2066 133 0 34 chr10 12175995 12176318 -133412970 - AluSx SINE Alu 0 312 1 207 108 0 0 chr10 12176410 12176439 -133412849 + (T)n Simple_repeat Simple_repeat 1 32 -5 717 167 33 8 chr10 12176439 12176559 -133412729 + FLAM_A SINE Alu 1 123 -10 207 108 0 0 chr10 12176559 12176566 -133412722 + (T)n Simple_repeat Simple_repeat 31 37 0 2245 118 0 0 chr10 12176583 12176880 -133412408 + AluSq SINE Alu 1 297 -16 2102 116 0 4 chr10 12177159 12177436 -133411852 - AluSc SINE Alu -2 307 32 2183 113 7 7 chr10 12178292 12178594 -133410694 + AluSx SINE Alu 1 302 -10 2421 104 0 13 chr10 12178660 12178976 -133410312 + AluSx SINE Alu 1 312 0 210 192 96 19 chr10 12179579 12179631 -133409657 + L2 LINE L2 3217 3272 0 1225 115 0 0 chr10 12179873 12180038 -133409250 - AluSg/x SINE Alu -14 298 134 2267 117 0 0 chr10 12180038 12180336 -133408952 - AluSx SINE Alu -14 298 1 3218 190 82 20 chr10 12180653 12181338 -133407950 + MER44D DNA MER2_type 5 603 -2 514 293 101 12 chr10 12182354 12182718 -133406570 - L1ME LINE L1 -511 6049 5652 264 344 59 37 chr10 12182872 12183227 -133406061 + L1M4 LINE L1 4797 5159 -987 2319 99 7 0 chr10 12183384 12183678 -133405610 + AluSg SINE Alu 1 296 -14 213 39 0 0 chr10 12183761 12183787 -133405501 + (TTTTTA)n Simple_repeat Simple_repeat 3 28 0 180 0 0 0 chr10 12183899 12183919 -133405369 + (TTTTTA)n Simple_repeat Simple_repeat 3 22 0 1998 148 0 3 chr10 12183921 12184224 -133405064 - AluSx SINE Alu -4 308 7 1817 275 117 26 chr10 12184329 12184622 -133404666 - L1ME LINE L1 -2210 4330 4065 2297 91 16 3 chr10 12184622 12184930 -133404358 + AluSx SINE Alu 1 312 0 324 0 0 0 chr10 12184933 12184969 -133404319 + (TA)n Simple_repeat Simple_repeat 2 37 0 1817 275 117 26 chr10 12184969 12185898 -133403390 - L1ME LINE L1 -2476 4064 2992 1895 113 11 4 chr10 12185946 12186212 -133403076 + AluSx SINE Alu 29 296 -16 551 245 165 40 chr10 12186212 12186485 -133402803 - L1MEc LINE L1 -3944 2634 2290 192 217 0 0 chr10 12186796 12186842 -133402446 + (TATG)n Simple_repeat Simple_repeat 2 47 0 2509 58 0 0 chr10 12186906 12187198 -133402090 - AluY SINE Alu 0 311 20 1699 105 0 4 chr10 12187344 12187573 -133401715 + AluSc SINE Alu 69 296 -13 1115 150 0 0 chr10 12187573 12187733 -133401555 + AluSg/x SINE Alu 134 293 -19 1595 201 3 3 chr10 12187877 12188161 -133401127 - AluJo SINE Alu -28 284 1 1179 266 34 38 chr10 12188319 12188495 -133400793 - L1MC4a LINE L1 -1813 5995 5820 2268 114 0 0 chr10 12188495 12188792 -133400496 - AluSx SINE Alu -15 297 1 1179 266 34 38 chr10 12188792 12188928 -133400360 - L1MC4a LINE L1 -1988 5820 5685 511 141 0 0 chr10 12188928 12189006 -133400282 - MADE1 DNA Mariner -2 78 1 1179 266 34 38 chr10 12189006 12189188 -133400100 - L1MC4a LINE L1 -2123 5685 5502 411 312 58 0 chr10 12189219 12189357 -133399931 - L1MEc LINE L1 -4927 1794 1649 661 231 35 20 chr10 12189359 12189558 -133399730 - LTR33 LTR ERVL -19 502 301 321 235 87 26 chr10 12189637 12189752 -133399536 - LTR33 LTR ERVL -377 144 23 309 26 0 0 chr10 12189834 12189872 -133399416 + (TTCA)n Simple_repeat Simple_repeat 3 40 0 2208 105 0 0 chr10 12189872 12190157 -133399131 - AluSx SINE Alu -27 285 1 285 89 22 0 chr10 12190360 12190405 -133398883 - Alu SINE Alu -256 46 1 2330 94 0 0 chr10 12190830 12191156 -133398132 - AluSx SINE Alu 0 326 1 221 329 43 67 chr10 12191204 12191414 -133397874 + L2 LINE L2 2630 2834 -480 2463 76 0 3 chr10 12191594 12191896 -133397392 + AluSc SINE Alu 1 301 -8 220 308 33 44 chr10 12192012 12192103 -133397185 - MER5A DNA MER1_type -27 162 73 878 240 198 7 chr10 12192458 12192746 -133396542 + MSTD LTR MaLR 2 344 -52 1816 153 28 17 chr10 12193624 12193911 -133395377 + AluJb SINE Alu 1 290 -22 720 218 8 8 chr10 12194329 12194462 -133394826 + FLAM_C SINE Alu 1 133 0 1764 79 96 68 chr10 12195229 12195509 -133393779 - AluSg SINE Alu -22 288 1 358 23 0 0 chr10 12195509 12195553 -133393735 - AluY SINE Alu -257 44 1 2375 76 3 0 chr10 12195993 12196282 -133393006 + AluSx SINE Alu 1 290 -22 1613 179 10 13 chr10 12196994 12197296 -133391992 - AluJo SINE Alu -11 301 1 752 115 0 0 chr10 12197319 12197423 -133391865 - AluSg/x SINE Alu -88 222 119 2620 49 0 3 chr10 12197877 12198183 -133391105 + AluY SINE Alu 1 305 -6 696 194 0 16 chr10 12198328 12198457 -133390831 + FLAM_A SINE Alu 2 128 -5 2372 87 0 13 chr10 12200144 12200454 -133388834 + AluSx SINE Alu 1 306 -6 1952 141 30 17 chr10 12200617 12200915 -133388373 - AluSx SINE Alu -10 302 1 2385 105 0 0 chr10 12201414 12201718 -133387570 + AluSg SINE Alu 1 304 -6 1863 150 7 23 chr10 12201825 12202132 -133387156 + AluSx SINE Alu 1 302 -10 688 184 95 17 chr10 12202409 12202588 -133386700 - L1MB8 LINE L1 -5 6173 5981 2349 81 3 3 chr10 12203020 12203315 -133385973 + AluSg SINE Alu 1 295 -15 2219 112 14 0 chr10 12203509 12203803 -133385485 + AluSx SINE Alu 1 298 -14 345 254 204 11 chr10 12204309 12204490 -133384798 + MER58A DNA MER1_type 1 216 -8 322 220 33 55 chr10 12204559 12204650 -133384638 + L1ME LINE L1 4408 4496 -1650 662 195 85 12 chr10 12204658 12204822 -133384466 - MER5A DNA MER1_type -11 178 3 413 234 44 103 chr10 12204824 12205097 -133384191 + L1ME LINE L1 4493 4749 -1397 1642 206 0 7 chr10 12205099 12205395 -133383893 + AluJo SINE Alu 5 298 -14 484 141 87 0 chr10 12205413 12205505 -133383783 + Tigger4(Zombi) DNA MER2_type 2632 2731 0 284 236 0 0 chr10 12205516 12205588 -133383700 + L1ME LINE L1 5383 5454 -712 640 249 34 28 chr10 12206067 12206244 -133383044 + AluSq SINE Alu 121 298 -15 285 161 169 69 chr10 12206267 12206397 -133382891 - HAL1 LINE L1 -28 2479 2337 777 220 88 58 chr10 12206627 12206990 -133382298 - HAL1 LINE L1 -665 1842 1469 631 192 77 62 chr10 12206995 12207255 -133382033 - L1MC4 LINE L1 -3 8039 7776 2341 117 0 0 chr10 12207266 12207573 -133381715 - AluSx SINE Alu -5 307 1 1936 257 198 46 chr10 12207573 12208868 -133380420 - HAL1 LINE L1 -1015 1492 2 2570 68 0 3 chr10 12209667 12209975 -133379313 + AluY SINE Alu 1 307 -4 1650 129 39 0 chr10 12210092 12210324 -133378964 + AluSx SINE Alu 58 298 -14 823 147 123 0 chr10 12210324 12210487 -133378801 - Charlie3 DNA MER1_type -2527 183 1 1791 168 24 0 chr10 12210960 12211252 -133378036 - AluJo SINE Alu -12 300 2 2282 108 0 0 chr10 12211316 12211635 -133377653 - AluSx SINE Alu 0 312 1 27 100 0 0 chr10 12212670 12212760 -133376528 + GC_rich Low_complexity Low_complexity 1 90 0 1573 87 143 9 chr10 12215488 12215718 -133373570 - AluSg SINE Alu -49 261 1 1609 164 43 4 chr10 12216321 12216601 -133372687 + AluJb SINE Alu 10 300 -12 2267 88 7 0 chr10 12216779 12217074 -133372214 + AluY SINE Alu 2 298 -13 225 94 0 0 chr10 12217302 12217334 -133371954 + (AGGGGG)n Simple_repeat Simple_repeat 2 33 0 243 0 0 0 chr10 12219257 12219284 -133370004 + (TG)n Simple_repeat Simple_repeat 2 28 0 2030 110 10 0 chr10 12219284 12219574 -133369714 - AluSx SINE Alu -19 293 1 2162 50 28 62 chr10 12220843 12221165 -133368123 - AluY SINE Alu 0 311 1 259 262 36 48 chr10 12221224 12221308 -133367980 + MARNA DNA Mariner 268 350 -236 229 188 66 88 chr10 12221825 12222006 -133367282 + (CCAA)n Simple_repeat Simple_repeat 1 177 0 * 250 213 122 30 chr10 12221921 12222085 -133367203 + (CAGC)n Simple_repeat Simple_repeat 1 179 0 287 250 48 6 chr10 12222114 12222282 -133367006 + (CAGAC)n Simple_repeat Simple_repeat 4 178 0 * 328 171 122 37 chr10 12222189 12222353 -133366935 + (CCAA)n Simple_repeat Simple_repeat 1 178 0 202 164 90 30 chr10 12222380 12222447 -133366841 + (CCAA)n Simple_repeat Simple_repeat 3 73 0 359 185 140 13 chr10 12222458 12222615 -133366673 + (CAGC)n Simple_repeat Simple_repeat 1 177 0 295 290 69 8 chr10 12223690 12223821 -133365467 + MER5A DNA MER1_type 1 139 -50 351 336 52 9 chr10 12223903 12224019 -133365269 + L2 LINE L2 3148 3268 -4 287 257 246 38 chr10 12224303 12224591 -133364697 - L2 LINE L2 -28 3244 2897 274 244 165 63 chr10 12224692 12224819 -133364469 - L2 LINE L2 -3 3310 3171 339 259 51 19 chr10 12225088 12225246 -133364042 + (CTATA)n Simple_repeat Simple_repeat 4 166 0 354 237 43 11 chr10 12225823 12225916 -133363372 - MLT1I LTR MaLR 0 409 314 230 294 0 0 chr10 12226217 12226268 -133363020 - L2 LINE L2 -26 3246 3196 2497 226 89 50 chr10 12226391 12227109 -133362179 + MER63C DNA MER1_type 1 762 -298 2182 109 13 7 chr10 12227109 12227413 -133361875 + AluSx SINE Alu 1 306 -6 2497 226 89 50 chr10 12227413 12227581 -133361707 + MER63C DNA MER1_type 762 922 -8 337 301 23 0 chr10 12227998 12228171 -133361117 + G-rich Low_complexity Low_complexity 2 178 0 * 407 294 24 0 chr10 12228114 12228284 -133361004 + (GGATG)n Simple_repeat Simple_repeat 4 177 0 399 278 122 56 chr10 12229183 12229363 -133359925 - MIR SINE MIR -35 227 36 868 153 0 106 chr10 12230532 12230721 -133358567 + AluJb SINE Alu 5 173 -139 1591 237 125 76 chr10 12230734 12230897 -133358391 + L1MC4 LINE L1 6595 6749 -1293 1371 196 94 0 chr10 12230897 12231162 -133358126 + AluJb SINE Alu 1 290 -22 1591 237 125 76 chr10 12231162 12231647 -133357641 + L1MC4 LINE L1 6749 7209 -833 2280 93 0 0 chr10 12231647 12231947 -133357341 + AluY SINE Alu 1 300 -11 1591 237 125 76 chr10 12231947 12232113 -133357175 + L1MC4 LINE L1 7209 7365 -677 2053 123 7 7 chr10 12232113 12232421 -133356867 + AluSx SINE Alu 1 308 -4 1591 237 125 76 chr10 12232421 12232613 -133356675 + L1MC4 LINE L1 7365 7775 -267 429 252 27 0 chr10 12232731 12232842 -133356446 + L1MC4 LINE L1 7778 7891 -151 243 317 12 0 chr10 12232995 12233077 -133356211 - MIR SINE MIR -110 152 70 2210 98 7 0 chr10 12233224 12233519 -133355769 + AluSx SINE Alu 1 297 -15 878 322 38 25 chr10 12234879 12235007 -133354281 - MLT1J LTR MaLR -30 481 356 1594 215 65 0 chr10 12235007 12235332 -133353956 + MER7A DNA MER2_type 1 344 -2 878 322 38 25 chr10 12235332 12235569 -133353719 - MLT1J LTR MaLR -155 356 111 2228 71 0 0 chr10 12235656 12235976 -133353312 - AluY SINE Alu 0 320 1 198 0 0 0 chr10 12236145 12236167 -133353121 + (A)n Simple_repeat Simple_repeat 1 22 0 1782 136 0 4 chr10 12236170 12236442 -133352846 - AluSx SINE Alu -37 275 5 4156 149 63 23 chr10 12238403 12238859 -133350429 - L1PA15 LINE L1 -3 6162 5725 2282 71 7 3 chr10 12238859 12239156 -133350132 - AluY SINE Alu -13 298 1 2043 113 7 3 chr10 12239156 12239447 -133349841 - AluSq SINE Alu -12 301 9 4156 149 63 23 chr10 12239447 12239803 -133349485 - L1PA15 LINE L1 -439 5726 5317 23 0 0 0 chr10 12239988 12240011 -133349277 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr10 12240282 12240312 -133348976 + AT_rich Low_complexity Low_complexity 1 30 0 412 155 14 0 chr10 12240429 12240500 -133348788 + AluS SINE Alu 6 77 -236 296 67 22 0 chr10 12240630 12240675 -133348613 + AluSp/q SINE Alu 247 292 -11 197 395 42 17 chr10 12242223 12242342 -133346946 - MIR SINE MIR -29 233 112 2150 82 27 10 chr10 12242772 12243064 -133346224 - AluSc SINE Alu -12 297 1 2232 85 10 0 chr10 12243448 12243753 -133345535 + AluSg SINE Alu 1 308 -2 220 154 0 0 chr10 12244960 12244999 -133344289 + MER5A DNA MER1_type 68 106 -83 205 197 28 70 chr10 12244995 12245066 -133344222 - MER5A DNA MER1_type -114 75 8 * 189 277 46 0 chr10 12245100 12245165 -133344123 + L2 LINE L2 2992 3059 -213 234 0 0 0 chr10 12245201 12245227 -133344061 + (CA)n Simple_repeat Simple_repeat 1 26 0 1240 274 125 49 chr10 12245970 12246259 -133343029 + L1MD2 LINE L1 4058 4324 -1822 2115 122 6 6 chr10 12246259 12246570 -133342718 + AluSx SINE Alu 1 311 -1 1240 274 125 49 chr10 12246570 12246865 -133342423 + L1MD2 LINE L1 4324 4595 -1551 2145 104 0 0 chr10 12246865 12247153 -133342135 - AluSx SINE Alu -24 288 1 1240 274 125 49 chr10 12247153 12247526 -133341762 + L1MD2 LINE L1 4595 5089 -1057 285 111 37 0 chr10 12247531 12247585 -133341703 - Alu SINE Alu -2 298 243 1062 101 0 0 chr10 12247692 12247841 -133341447 + AluY SINE Alu 147 295 -16 1428 261 11 13 chr10 12247843 12248215 -133341073 + L1MD2 LINE L1 5320 5690 -669 1286 188 149 4 chr10 12248248 12248509 -133340779 + AluJb SINE Alu 1 299 -3 2095 117 7 0 chr10 12248509 12248807 -133340481 + AluSx SINE Alu 1 300 -12 1252 141 0 0 chr10 12248867 12249052 -133340236 + AluSx SINE Alu 3 187 -125 1034 279 117 31 chr10 12249111 12249731 -133339557 + L1MD2 LINE L1 5662 6344 -15 2387 52 0 43 chr10 12249731 12250055 -133339233 - AluY SINE Alu -1 310 1 1527 186 3 14 chr10 12251661 12251957 -133337331 + AluJb SINE Alu 5 297 -15 408 312 110 9 chr10 12251964 12252182 -133337106 - LTR16A LTR ERVL -148 302 63 261 328 39 23 chr10 12252271 12252399 -133336889 + L2 LINE L2 3173 3302 -11 2017 113 10 3 chr10 12253293 12253594 -133335694 + AluSq SINE Alu 2 304 -9 2317 89 7 0 chr10 12253615 12253919 -133335369 + AluSc SINE Alu 1 306 -3 500 255 94 26 chr10 12254493 12254542 -133334746 - MIR SINE MIR -2 260 216 2408 57 0 7 chr10 12254542 12254841 -133334447 + AluY SINE Alu 1 297 -14 500 255 94 26 chr10 12254841 12254983 -133334305 - MIR SINE MIR -46 216 56 372 244 71 31 chr10 12255877 12256004 -133333284 + L2 LINE L2 3137 3268 -4 2109 128 0 0 chr10 12256051 12256357 -133332931 + AluSx SINE Alu 1 306 -6 2184 68 17 10 chr10 12256424 12256716 -133332572 - AluY SINE Alu -17 294 1 1257 111 58 0 chr10 12256886 12257076 -133332212 + Tigger2a DNA MER2_type 1 201 -233 835 238 6 0 chr10 12257077 12257249 -133332039 - AluJb SINE Alu -2 310 138 846 150 48 0 chr10 12257253 12257420 -133331868 + Tigger2a DNA MER2_type 209 383 -61 2201 99 23 0 chr10 12257421 12257723 -133331565 + AluSq SINE Alu 1 309 -4 2146 112 3 0 chr10 12258160 12258456 -133330832 + AluSx SINE Alu 1 297 -15 181 237 0 118 chr10 12258522 12258598 -133330690 - MIR SINE MIR -20 242 176 393 234 70 31 chr10 12258603 12258731 -133330557 + L2 LINE L2 3136 3268 -4 1999 111 4 0 chr10 12258778 12259089 -133330199 + AluSx SINE Alu 1 312 0 1853 133 24 3 chr10 12259143 12259436 -133329852 + AluSx SINE Alu 6 304 -8 2209 128 48 57 chr10 12259662 12259859 -133329429 + Tigger2a DNA MER2_type 1 198 -2510 285 51 0 0 chr10 12259859 12259898 -133329390 + (TTTA)n Simple_repeat Simple_repeat 1 39 0 623 234 83 0 chr10 12259898 12260043 -133329245 - FAM SINE Alu -18 157 1 2209 128 48 57 chr10 12260043 12260213 -133329075 + Tigger2a DNA MER2_type 197 367 -2341 2127 100 3 0 chr10 12260213 12260504 -133328784 + AluSx SINE Alu 1 292 -20 2209 128 48 57 chr10 12260504 12260572 -133328716 + Tigger2a DNA MER2_type 367 434 0 2337 64 0 0 chr10 12261947 12262242 -133327046 - AluY SINE Alu -16 295 1 248 53 26 0 chr10 12262664 12262702 -133326586 + (CAAAAA)n Simple_repeat Simple_repeat 3 41 0 1153 214 97 0 chr10 12263753 12264042 -133325246 - MER2 DNA MER2_type -28 317 1 2122 218 28 15 chr10 12264174 12264633 -133324655 + MLT1C LTR MaLR 1 465 -2 1309 158 17 4 chr10 12265150 12265384 -133323904 + AluJo SINE Alu 72 308 -4 204 302 0 0 chr10 12265436 12265489 -133323799 + MER5A DNA MER1_type 13 65 -124 576 86 9 129 chr10 12265505 12265591 -133323697 + U6 snRNA snRNA 1 71 -36 2044 116 0 20 chr10 12265591 12265725 -133323563 + AluSx SINE Alu 5 140 -172 2250 66 31 0 chr10 12265725 12266014 -133323274 + AluSg1 SINE Alu 1 298 -11 2044 116 0 20 chr10 12266014 12266182 -133323106 + AluSx SINE Alu 140 301 -11 576 86 9 129 chr10 12266182 12266211 -133323077 + U6 snRNA snRNA 71 102 -5 23 0 0 0 chr10 12266211 12266234 -133323054 + AT_rich Low_complexity Low_complexity 1 23 0 1902 140 7 7 chr10 12266621 12266913 -133322375 + AluSx SINE Alu 2 293 -19 813 177 49 43 chr10 12266913 12267077 -133322211 - FRAM SINE Alu 0 166 2 2058 98 14 0 chr10 12267155 12267442 -133321846 - AluSq SINE Alu -22 291 1 401 213 52 66 chr10 12267790 12267926 -133321362 - L2 LINE L2 -1 3312 3179 694 340 128 31 chr10 12268121 12268962 -133320326 - L2 LINE L2 -449 2865 1943 504 90 26 0 chr10 12269680 12269758 -133319530 + MADE1 DNA Mariner 1 80 0 1786 119 0 4 chr10 12270426 12270677 -133318611 + AluSx SINE Alu 49 298 -14 2508 46 0 0 chr10 12270752 12271054 -133318234 + AluY SINE Alu 1 302 -9 21 0 0 0 chr10 12271170 12271191 -133318097 + AT_rich Low_complexity Low_complexity 1 21 0 2209 87 10 0 chr10 12271193 12271482 -133317806 + AluSx SINE Alu 1 292 -20 1604 172 0 15 chr10 12271731 12271993 -133317295 + AluJo SINE Alu 52 309 -3 717 266 155 4 chr10 12272579 12272805 -133316483 + MIR SINE MIR 2 261 -1 1651 157 41 31 chr10 12272820 12273113 -133316175 + AluJo SINE Alu 1 296 -16 302 247 14 0 chr10 12273456 12273529 -133315759 + Tigger3(Golem) DNA MER2_type 1 74 -2955 852 150 14 0 chr10 12273531 12273671 -133315617 + Tigger3(Golem) DNA MER2_type 2897 3038 0 2255 88 0 10 chr10 12274194 12274490 -133314798 + AluSc SINE Alu 1 293 -16 30 59 0 0 chr10 12275777 12275828 -133313460 + AT_rich Low_complexity Low_complexity 1 51 0 2408 99 0 0 chr10 12276909 12277213 -133312075 - AluSg SINE Alu -6 304 1 509 254 114 75 chr10 12277432 12277712 -133311576 + L2 LINE L2 3020 3310 -3 482 245 14 7 chr10 12277773 12277912 -133311376 - MER104 DNA Tc2 -13 167 28 263 274 147 11 chr10 12277966 12278061 -133311227 + L2 LINE L2 3118 3225 -88 2347 62 17 0 chr10 12278163 12278454 -133310834 - AluSp SINE Alu -17 296 1 2193 151 0 0 chr10 12278684 12278996 -133310292 + AluSx SINE Alu 1 312 0 4429 62 0 2 chr10 12279285 12279848 -133309440 - L1PA5 LINE L1 0 6154 5593 1988 114 4 0 chr10 12279948 12280220 -133309068 - AluSq SINE Alu -40 273 1 809 137 73 0 chr10 12280401 12280525 -133308763 - AluJb SINE Alu -51 261 129 1917 146 0 49 chr10 12280530 12280719 -133308569 - AluSp SINE Alu 0 313 145 2259 104 3 7 chr10 12280719 12281028 -133308260 - AluY SINE Alu -1 310 3 1917 146 0 49 chr10 12281028 12281167 -133308121 - AluSp SINE Alu -168 145 1 425 204 142 9 chr10 12281312 12281425 -133307863 - MIR SINE MIR 0 262 135 312 86 0 17 chr10 12281440 12281498 -133307790 - AluSp/q SINE Alu -1 302 246 2231 95 3 3 chr10 12281598 12281893 -133307395 + AluSg SINE Alu 1 295 -15 2081 130 7 3 chr10 12282561 12282860 -133306428 - AluSx SINE Alu -12 300 1 2251 89 0 13 chr10 12282866 12283168 -133306120 - AluSg SINE Alu -12 298 1 697 215 185 10 chr10 12283424 12283629 -133305659 + MIR SINE MIR 22 262 0 301 309 95 32 chr10 12283740 12283866 -133305422 + MIR SINE MIR 20 153 -109 324 252 126 8 chr10 12284052 12284179 -133305109 + L1ME4a LINE L1 5963 6104 -17 2113 126 0 7 chr10 12284228 12284542 -133304746 + AluSx SINE Alu 1 312 0 26 0 0 0 chr10 12284583 12284609 -133304679 + AT_rich Low_complexity Low_complexity 1 26 0 314 73 16 0 chr10 12284928 12284981 -133304307 + Alu SINE Alu 247 290 -12 1863 133 16 35 chr10 12287462 12287779 -133301509 - AluY SINE Alu 0 311 1 1611 129 112 24 chr10 12288118 12288405 -133300883 + AluSx SINE Alu 1 312 0 404 268 29 36 chr10 12288505 12288643 -133300645 - MIR SINE MIR -21 241 105 27 73 0 0 chr10 12288730 12288785 -133300503 + AT_rich Low_complexity Low_complexity 1 55 0 2251 91 0 17 chr10 12288893 12289190 -133300098 - AluSg SINE Alu -18 292 1 413 278 161 85 chr10 12289572 12289842 -133299446 + L2 LINE L2 2819 3140 -173 2012 119 25 3 chr10 12289842 12290127 -133299161 - AluSp SINE Alu -22 291 1 413 278 161 85 chr10 12290127 12290316 -133298972 + L2 LINE L2 3140 3313 0 454 307 59 85 chr10 12290329 12290589 -133298699 - L1M4 LINE L1 -2100 4046 3798 2305 93 0 0 chr10 12290589 12290878 -133298410 - AluY SINE Alu -22 289 1 454 307 59 85 chr10 12290878 12290992 -133298296 - L1M4 LINE L1 -2348 3798 3682 2221 80 10 0 chr10 12291136 12291424 -133297864 - AluSp SINE Alu -19 294 4 21 0 0 0 chr10 12291922 12291943 -133297345 + AT_rich Low_complexity Low_complexity 1 21 0 2104 98 0 0 chr10 12291943 12292219 -133297069 - AluSx SINE Alu -36 276 1 2071 104 16 35 chr10 12292694 12293010 -133296278 - AluY SINE Alu -1 310 1 225 328 148 16 chr10 12293010 12293127 -133296161 + MIR SINE MIR 96 228 -34 2398 78 0 10 chr10 12293350 12293656 -133295632 - AluSq SINE Alu -10 303 1 188 382 15 15 chr10 12293998 12294129 -133295159 + L2 LINE L2 821 951 -2363 748 293 170 24 chr10 12294129 12294635 -133294653 + L2 LINE L2 2079 2658 -656 563 316 172 16 chr10 12294688 12295061 -133294227 + L2 LINE L2 2883 3313 0 711 277 46 8 chr10 12295339 12295599 -133293689 + L2 LINE L2 1631 1900 -1414 2161 108 7 0 chr10 12295932 12296229 -133293059 + AluSx SINE Alu 1 299 -13 485 234 8 0 chr10 12297519 12297630 -133291658 - MIR SINE MIR -63 145 38 189 94 0 0 chr10 12297830 12297862 -133291426 + (A)n Simple_repeat Simple_repeat 1 32 0 1980 124 10 17 chr10 12298059 12298349 -133290939 + AluSx SINE Alu 6 293 -19 22 35 0 0 chr10 12298398 12298427 -133290861 + AT_rich Low_complexity Low_complexity 1 29 0 584 210 216 6 chr10 12298811 12298987 -133290301 + MIR SINE MIR 37 249 -13 739 133 0 42 chr10 12300665 12300785 -133288503 - FLAM_A SINE Alu -14 128 14 1785 151 11 0 chr10 12300850 12301121 -133288167 + AluSx SINE Alu 12 285 -27 1856 163 0 16 chr10 12301423 12301729 -133287559 + AluJo SINE Alu 5 305 -7 2327 115 0 0 chr10 12301885 12302190 -133287098 + AluSx SINE Alu 1 305 -7 247 317 0 0 chr10 12302287 12302391 -133286897 + CT-rich Low_complexity Low_complexity 3 106 0 188 361 46 0 chr10 12303335 12303443 -133285845 + L2 LINE L2 3189 3301 -12 291 315 0 0 chr10 12303447 12303520 -133285768 - MIR3 SINE MIR -4 204 132 423 261 80 60 chr10 12303650 12303849 -133285439 + L1ME4a LINE L1 5706 5908 -213 21 71 0 0 chr10 12303968 12304010 -133285278 + AT_rich Low_complexity Low_complexity 1 42 0 2326 110 0 0 chr10 12304843 12305152 -133284136 - AluSq SINE Alu -4 309 1 21 0 0 0 chr10 12306084 12306105 -133283183 + AT_rich Low_complexity Low_complexity 1 21 0 2452 76 0 0 chr10 12306259 12306563 -133282725 - AluY SINE Alu -7 304 1 189 318 0 0 chr10 12306815 12306859 -133282429 - L2 LINE L2 -10 3262 3219 413 254 197 0 chr10 12307046 12307168 -133282120 + MER5A DNA MER1_type 44 189 0 2110 123 0 3 chr10 12308140 12308433 -133280855 + AluSx SINE Alu 1 292 -20 249 33 0 0 chr10 12308433 12308463 -133280825 + (TA)n Simple_repeat Simple_repeat 2 31 0 845 148 0 22 chr10 12308483 12308618 -133280670 + FLAM_C SINE Alu 1 132 -1 2113 120 3 16 chr10 12309650 12309959 -133279329 + AluSx SINE Alu 1 305 -7 1027 216 0 0 chr10 12310629 12310814 -133278474 - AluJb SINE Alu -31 281 97 1882 133 4 7 chr10 12310914 12311185 -133278103 - AluSx SINE Alu -37 275 6 469 220 76 30 chr10 12311309 12311441 -133277847 + MIR SINE MIR 118 255 -7 879 99 0 25 chr10 12311441 12311562 -133277726 + FLAM_C SINE Alu 1 118 -25 1994 137 13 7 chr10 12312851 12313150 -133276138 + AluJb SINE Alu 1 301 -11 666 180 25 0 chr10 12313410 12313532 -133275756 - MER20 DNA MER1_type 0 219 95 1626 194 43 3 chr10 12313639 12313759 -133275529 + AluJo SINE Alu 2 116 -196 285 29 0 0 chr10 12313759 12313793 -133275495 + (TAAAA)n Simple_repeat Simple_repeat 1 34 0 1626 194 43 3 chr10 12313793 12313971 -133275317 + AluJo SINE Alu 116 312 0 897 162 10 76 chr10 12313979 12314176 -133275112 + FRAM SINE Alu 1 176 0 1988 157 7 0 chr10 12314183 12314482 -133274806 + AluJo SINE Alu 1 301 -11 547 319 93 42 chr10 12314482 12314911 -133274377 - L2 LINE L2 -21 3292 2842 339 299 103 0 chr10 12315029 12315136 -133274152 + L2 LINE L2 3196 3313 0 416 365 47 45 chr10 12315712 12316178 -133273110 + L2 LINE L2 2378 2844 -470 268 366 108 0 chr10 12316374 12316467 -133272821 + L2 LINE L2 3121 3223 -49 252 0 0 0 chr10 12316701 12316729 -133272559 + (TTCA)n Simple_repeat Simple_repeat 2 29 0 1216 171 155 4 chr10 12316729 12316974 -133272314 - AluJo SINE Alu -30 282 1 26 0 0 0 chr10 12316974 12317000 -133272288 + AT_rich Low_complexity Low_complexity 1 26 0 1020 134 6 28 chr10 12318149 12318328 -133270960 - Tigger4(Zombi) DNA MER2_type 0 2731 2557 320 267 10 0 chr10 12318428 12318529 -133270759 - L1ME LINE L1 -403 5718 5617 2356 84 0 0 chr10 12318764 12319063 -133270225 - AluY SINE Alu -12 299 1 391 192 0 40 chr10 12319066 12319165 -133270123 - MER103 DNA DNA -70 96 2 816 258 105 12 chr10 12319355 12319726 -133269562 - L1MEc LINE L1 -3348 2867 2455 2391 93 3 0 chr10 12319726 12320028 -133269260 - AluSp SINE Alu -10 303 1 816 258 105 12 chr10 12320028 12320056 -133269232 - L1MEc LINE L1 -3760 2455 2431 350 281 55 38 chr10 12320255 12320582 -133268706 - L1MEc LINE L1 -3806 2409 2117 1765 80 8 21 chr10 12320851 12321088 -133268200 - AluSq SINE Alu -8 305 72 11261 53 6 0 chr10 12321188 12322573 -133266715 - L1P LINE L1 -993 5153 3761 231 227 204 11 chr10 12322612 12322700 -133266588 + Charlie7 DNA MER1_type 1 105 -2507 * 339 228 72 33 chr10 12322675 12322855 -133266433 + Charlie7 DNA MER1_type 2420 2606 -6 987 177 0 12 chr10 12322917 12323081 -133266207 + FRAM SINE Alu 1 161 -15 319 268 251 36 chr10 12323117 12323310 -133265978 - L1ME4a LINE L1 -39 6082 5932 2227 90 3 29 chr10 12323310 12323620 -133265668 - AluSp SINE Alu -11 302 1 319 268 251 36 chr10 12323620 12323897 -133265391 - L1ME4a LINE L1 -189 5932 5511 24 0 0 0 chr10 12324612 12324636 -133264652 + AT_rich Low_complexity Low_complexity 1 24 0 454 330 17 23 chr10 12324636 12324809 -133264479 - MIR SINE MIR -30 232 61 388 238 25 49 chr10 12325571 12325693 -133263595 - MER103 DNA DNA -45 121 3 881 92 0 0 chr10 12327428 12327537 -133261751 + AluY SINE Alu 1 109 -202 1916 32 0 0 chr10 12327637 12327856 -133261432 - AluY SINE Alu -92 219 1 339 183 37 37 chr10 12328778 12328860 -133260428 + L1ME3 LINE L1 6016 6097 -65 1065 122 0 13 chr10 12328861 12329017 -133260271 + L1PA11 LINE L1 6021 6174 0 2212 124 0 13 chr10 12329148 12329462 -133259826 + AluSx SINE Alu 1 310 -2 1223 189 28 4 chr10 12329583 12329854 -133259434 + L1MC/D LINE L1 5141 5417 -743 439 109 0 93 chr10 12329855 12329978 -133259310 + MER2 DNA MER2_type 3 206 -139 1436 186 45 4 chr10 12329998 12330262 -133259026 - AluJo SINE Alu -22 290 16 848 181 0 0 chr10 12331010 12331137 -133258151 + FLAM_A SINE Alu 1 127 -6 2028 77 23 0 chr10 12332114 12332373 -133256915 + AluY SINE Alu 39 303 -8 2316 98 0 7 chr10 12332379 12332684 -133256604 + AluY SINE Alu 1 303 -8 24 0 0 0 chr10 12332769 12332793 -133256495 + AT_rich Low_complexity Low_complexity 1 24 0 532 306 62 65 chr10 12332970 12333536 -133255752 + HAL1b LINE L1 66 629 -719 2234 98 10 0 chr10 12333536 12333833 -133255455 + AluSq SINE Alu 1 300 -13 468 305 28 79 chr10 12334344 12334538 -133254750 + L1 LINE L1 2153 2322 -3824 2114 133 0 7 chr10 12334538 12334846 -133254442 + AluSx SINE Alu 1 306 -6 468 305 28 79 chr10 12334846 12335005 -133254283 + L1 LINE L1 2322 2488 -3658 1581 183 0 51 chr10 12335363 12335674 -133253614 + AluJo SINE Alu 1 295 -17 356 198 124 104 chr10 12335720 12335922 -133253366 + L1 LINE L1 3074 3279 -2867 230 238 36 24 chr10 12335941 12336025 -133253263 + L1MC/D LINE L1 5770 5854 -1954 284 220 38 119 chr10 12336275 12336386 -133252902 - L2 LINE L2 -4 3309 3213 2557 48 0 0 chr10 12336386 12336677 -133252611 + AluY SINE Alu 20 310 -1 284 220 38 119 chr10 12336677 12336724 -133252564 - L2 LINE L2 -100 3213 3164 290 256 139 0 chr10 12337061 12337147 -133252141 - L2 LINE L2 -29 3284 3187 2148 95 3 0 chr10 12337180 12337463 -133251825 + AluSg SINE Alu 6 289 -21 641 299 53 77 chr10 12337483 12337858 -133251430 + L2 LINE L2 2907 3272 0 2094 114 14 0 chr10 12338026 12338316 -133250972 - AluSx SINE Alu -18 294 1 21 0 0 0 chr10 12338663 12338684 -133250604 + AT_rich Low_complexity Low_complexity 1 21 0 789 179 138 60 chr10 12339777 12340045 -133249243 + LTR48 LTR ERV1 1 289 -498 284 169 15 62 chr10 12340211 12340276 -133249012 - FRAM/FAM SINE Alu -90 76 15 2322 84 0 7 chr10 12340316 12340615 -133248673 + AluY SINE Alu 5 301 -10 1219 114 6 0 chr10 12340616 12340782 -133248506 + AluSg/x SINE Alu 131 297 -13 863 223 66 86 chr10 12340785 12340973 -133248315 - Charlie1a DNA MER1_type -2462 299 118 2277 103 3 7 chr10 12340973 12341275 -133248013 + AluSg SINE Alu 1 301 -9 863 223 66 86 chr10 12341275 12341387 -133247901 - Charlie1a DNA MER1_type -2643 118 5 258 223 68 68 chr10 12342027 12342130 -133247158 + MLT1K LTR MaLR 11 113 -475 1591 185 49 0 chr10 12342239 12342363 -133246925 + AluJo SINE Alu 1 117 -195 309 51 0 0 chr10 12342363 12342402 -133246886 + (TAAAA)n Simple_repeat Simple_repeat 5 43 0 1591 185 49 0 chr10 12342402 12342564 -133246724 + AluJo SINE Alu 117 301 -11 2306 105 3 0 chr10 12342874 12343179 -133246109 + AluSq SINE Alu 1 306 -7 2138 117 0 0 chr10 12343730 12344020 -133245268 + AluSq SINE Alu 1 290 -23 230 313 16 0 chr10 12344169 12344233 -133245055 - MIR SINE MIR -160 102 38 261 288 0 0 chr10 12344243 12344309 -133244979 - L2 LINE L2 0 3313 3248 411 242 87 27 chr10 12344346 12344495 -133244793 - L2 LINE L2 -42 3271 3114 1739 170 0 53 chr10 12344508 12344826 -133244462 + AluJb SINE Alu 1 301 -11 23 0 0 0 chr10 12344826 12344849 -133244439 + AT_rich Low_complexity Low_complexity 1 23 0 27 0 0 0 chr10 12344965 12344992 -133244296 + AT_rich Low_complexity Low_complexity 1 27 0 703 75 64 0 chr10 12345101 12345195 -133244093 + MER30 DNA MER1_type 1 100 -130 1899 152 0 25 chr10 12345222 12345538 -133243750 - AluSx SINE Alu 0 312 5 1242 119 0 6 chr10 12346177 12346353 -133242935 + AluJb SINE Alu 3 177 -135 803 257 55 31 chr10 12346353 12346645 -133242643 - LTR21A LTR ERV1 -19 486 188 930 92 54 0 chr10 12346766 12346896 -133242392 + AluJb SINE Alu 172 308 -4 1005 112 0 14 chr10 12347329 12347472 -133241816 + AluSq/x SINE Alu 1 141 -171 1813 90 0 71 chr10 12347472 12347621 -133241667 + AluSp SINE Alu 1 124 -189 2553 63 0 0 chr10 12347621 12347921 -133241367 + AluY SINE Alu 1 300 -11 1813 90 0 71 chr10 12347921 12348037 -133241251 + AluSp SINE Alu 124 247 -66 1543 109 0 4 chr10 12348040 12348072 -133241216 + AluSg/x SINE Alu 83 114 -196 216 0 0 0 chr10 12348072 12348096 -133241192 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1543 109 0 4 chr10 12348096 12348292 -133240996 + AluSg/x SINE Alu 114 310 0 205 266 213 21 chr10 12348439 12348533 -133240755 + L2 LINE L2 3117 3228 -44 2113 85 0 46 chr10 12348831 12349138 -133240150 - AluSg SINE Alu -14 296 4 228 86 0 0 chr10 12349139 12349174 -133240114 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2371 65 3 0 chr10 12349182 12349472 -133239816 - AluSp SINE Alu -22 291 1 1046 103 0 0 chr10 12349472 12349608 -133239680 - AluSq/x SINE Alu -176 136 1 1586 143 10 57 chr10 12350628 12350942 -133238346 - AluJo SINE Alu -13 299 1 2133 122 0 7 chr10 12351598 12351893 -133237395 - AluSx SINE Alu -19 293 1 248 181 48 72 chr10 12352150 12352233 -133237055 - MLT1-int LTR MaLR -1290 81 1 767 233 99 15 chr10 12352292 12352494 -133236794 - MLT1J LTR MaLR -292 219 1 27 0 0 0 chr10 12352567 12352594 -133236694 + AT_rich Low_complexity Low_complexity 1 27 0 1245 112 0 103 chr10 12352594 12352818 -133236470 + AluSg SINE Alu 1 201 -109 743 168 0 0 chr10 12352818 12352931 -133236357 - AluSq/x SINE Alu -198 114 2 465 198 0 0 chr10 12353085 12353166 -133236122 - AluJ/FRAM SINE Alu -13 299 219 1586 160 19 4 chr10 12353291 12353547 -133235741 + AluSx SINE Alu 3 262 -50 237 276 31 55 chr10 12354315 12354442 -133234846 + L1MC5 LINE L1 7813 7936 -25 466 241 36 9 chr10 12354664 12354776 -133234512 - L2 LINE L2 -5 3308 3194 213 331 204 25 chr10 12354957 12355206 -133234082 - L2 LINE L2 -337 2977 2774 2124 125 13 3 chr10 12355206 12355510 -133233778 + AluSq SINE Alu 1 307 -6 213 331 204 25 chr10 12355510 12355613 -133233675 - L2 LINE L2 -540 2774 2562 21 0 0 0 chr10 12356007 12356028 -133233260 + AT_rich Low_complexity Low_complexity 1 21 0 1557 131 63 4 chr10 12356820 12357072 -133232216 - LTR24B LTR ERV1 -4 572 306 466 96 0 27 chr10 12357086 12357142 -133232146 - LTR24B LTR ERV1 -503 73 17 2143 119 0 7 chr10 12357142 12357437 -133231851 - AluSx SINE Alu -18 294 2 1943 162 0 10 chr10 12357438 12357747 -133231541 - AluJo SINE Alu -6 306 1 466 96 0 27 chr10 12357747 12357761 -133231527 - LTR24B LTR ERV1 -558 18 3 681 179 31 162 chr10 12358293 12358522 -133230766 + MER21B LTR ERV1 17 215 -648 * 832 171 66 7 chr10 12358521 12358673 -133230615 + MLT1A1 LTR MaLR 205 365 0 2134 102 0 3 chr10 12359124 12359447 -133229841 + AluY SINE Alu 1 322 0 1731 132 35 0 chr10 12359467 12359725 -133229563 - AluSx SINE Alu -13 299 33 583 275 65 55 chr10 12359888 12359924 -133229364 + L1ME4a LINE L1 5491 5525 -596 2299 114 0 0 chr10 12359924 12360231 -133229057 + AluY SINE Alu 1 307 -4 583 275 65 55 chr10 12360231 12360265 -133229023 + L1ME4a LINE L1 5525 5557 -564 3481 71 5 0 chr10 12360265 12360685 -133228603 - L1PA8 LINE L1 -14 6158 5737 583 275 65 55 chr10 12360685 12361016 -133228272 + L1ME4a LINE L1 5557 5897 -224 3204 238 91 62 chr10 12361082 12362565 -133226723 + L1MEc LINE L1 87 1615 -4781 1564 157 17 50 chr10 12362565 12362865 -133226423 - AluJo SINE Alu -22 290 1 3204 238 91 62 chr10 12362865 12362891 -133226397 + L1MEc LINE L1 1615 1639 -4757 1699 150 4 11 chr10 12362892 12363152 -133226136 + AluSx SINE Alu 1 258 -54 2329 78 4 0 chr10 12363243 12363544 -133225744 + AluSp SINE Alu 5 306 0 1801 107 31 24 chr10 12363652 12363942 -133225346 - AluSg SINE Alu -18 292 1 2321 94 7 0 chr10 12364233 12364530 -133224758 + AluSg SINE Alu 1 299 -11 2200 114 10 0 chr10 12364560 12364858 -133224430 + AluSx SINE Alu 1 301 -11 1431 49 0 0 chr10 12365562 12365726 -133223562 - L1PA7 LINE L1 0 6154 5991 183 42 0 0 chr10 12365731 12365755 -133223533 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1772 170 0 10 chr10 12365985 12366120 -133223168 + AluJb SINE Alu 1 136 -172 2203 129 0 0 chr10 12366120 12366422 -133222866 + AluSg SINE Alu 1 302 -8 1772 170 0 10 chr10 12366422 12366597 -133222691 + AluJb SINE Alu 136 308 0 1705 218 27 0 chr10 12366972 12367303 -133221985 - MER58B DNA MER1_type -1 340 1 21 0 0 0 chr10 12367439 12367460 -133221828 + AT_rich Low_complexity Low_complexity 1 21 0 2116 126 0 3 chr10 12367541 12367842 -133221446 - AluSx SINE Alu -10 302 3 24 32 0 0 chr10 12367849 12367880 -133221408 + AT_rich Low_complexity Low_complexity 1 31 0 2064 65 8 8 chr10 12368065 12368326 -133220962 - AluSp SINE Alu -8 305 45 899 234 96 25 chr10 12368446 12368685 -133220603 - MIR SINE MIR -5 257 2 221 331 137 0 chr10 12368943 12369067 -133220221 + MIR SINE MIR 60 200 -62 1551 160 60 32 chr10 12369067 12369349 -133219939 + AluJo SINE Alu 1 290 -22 2060 103 22 0 chr10 12369683 12369954 -133219334 + AluSx SINE Alu 1 277 -35 2042 118 7 3 chr10 12369955 12370252 -133219036 + AluSx SINE Alu 7 304 -8 25 0 0 0 chr10 12371138 12371163 -133218125 + AT_rich Low_complexity Low_complexity 1 25 0 2038 107 0 58 chr10 12371212 12371522 -133217766 + AluSc SINE Alu 1 292 -17 1730 167 13 7 chr10 12371528 12371833 -133217455 + AluJb SINE Alu 1 307 -5 696 189 24 0 chr10 12372000 12372127 -133217161 + AluJo SINE Alu 6 135 -177 2152 116 0 0 chr10 12372151 12372435 -133216853 + AluSx SINE Alu 5 288 -24 25 0 0 0 chr10 12372435 12372460 -133216828 + AT_rich Low_complexity Low_complexity 1 25 0 1765 171 10 7 chr10 12372472 12372777 -133216511 + AluJo SINE Alu 3 308 -4 2005 136 7 0 chr10 12373088 12373402 -133215886 + AluSx SINE Alu 1 316 0 702 327 44 29 chr10 12373457 12373622 -133215666 + L3 LINE CR1 559 720 -857 2118 127 3 0 chr10 12373622 12373913 -133215375 - AluJb SINE Alu -20 292 1 702 327 44 29 chr10 12373913 12374203 -133215085 + L3 LINE CR1 720 1021 -556 349 235 134 0 chr10 12374210 12374329 -133214959 + L3 LINE CR1 1146 1280 -297 197 244 0 0 chr10 12374357 12374398 -133214890 - MER5C DNA MER1_type -2 322 282 2308 108 0 7 chr10 12374466 12374772 -133214516 - AluSq SINE Alu -9 304 1 268 232 37 12 chr10 12374775 12374857 -133214431 - MER5C DNA MER1_type -204 120 37 271 347 68 32 chr10 12374888 12375139 -133214149 + L3 LINE CR1 1308 1567 -10 294 123 0 35 chr10 12376174 12376231 -133213057 - Alu SINE Alu -245 55 1 347 137 68 14 chr10 12376233 12376306 -133212982 - Alu SINE Alu -5 296 220 820 174 149 6 chr10 12376308 12376334 -133212954 + AluJo SINE Alu 85 106 -206 2305 89 0 10 chr10 12376334 12376637 -133212651 + AluY SINE Alu 8 307 -4 820 174 149 6 chr10 12376637 12376771 -133212517 + AluJo SINE Alu 106 268 -44 264 30 0 0 chr10 12376779 12376812 -133212476 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 219 200 80 0 chr10 12377050 12377100 -133212188 + MIR SINE MIR 209 262 0 1689 132 8 0 chr10 12377392 12377635 -133211653 + AluSx SINE Alu 54 298 -14 1942 153 7 0 chr10 12377652 12377947 -133211341 + AluSx SINE Alu 1 297 -15 2421 96 3 0 chr10 12377949 12378252 -133211036 + AluSp SINE Alu 1 304 -9 327 98 0 0 chr10 12378457 12378564 -133210724 - Alu SINE Alu 0 347 241 23 33 0 0 chr10 12378781 12378811 -133210477 + AT_rich Low_complexity Low_complexity 1 30 0 2335 95 7 0 chr10 12378844 12379139 -133210149 - AluSg SINE Alu -13 297 1 810 156 0 16 chr10 12379338 12379466 -133209822 - FLAM_C SINE Alu -7 126 1 2179 106 0 3 chr10 12380986 12381292 -133207996 + AluSx SINE Alu 1 305 0 21 0 0 0 chr10 12381437 12381458 -133207830 + AT_rich Low_complexity Low_complexity 1 21 0 289 74 0 56 chr10 12381791 12381845 -133207443 - AluJo SINE Alu -166 136 86 2174 126 13 0 chr10 12384037 12384339 -133204949 + AluSx SINE Alu 1 306 -6 1846 101 23 23 chr10 12384643 12384925 -133204363 + AluSx SINE Alu 29 310 0 2146 90 3 10 chr10 12384960 12385250 -133204038 + AluSc SINE Alu 1 288 -21 2350 77 10 0 chr10 12385250 12385550 -133203738 + AluY SINE Alu 1 303 -8 1533 147 48 8 chr10 12385883 12386134 -133203154 + AluJo SINE Alu 27 287 -25 2524 80 0 10 chr10 12386366 12386680 -133202608 + AluSp SINE Alu 1 311 -2 300 115 115 64 chr10 12386797 12386875 -133202413 + L1MC5 LINE L1 7834 7915 -46 1589 142 0 0 chr10 12386876 12387108 -133202180 + AluJo SINE Alu 67 298 -14 708 170 44 7 chr10 12387205 12387340 -133201948 + FAM SINE Alu 1 140 -45 515 273 0 0 chr10 12387477 12387598 -133201690 + FLAM_A SINE Alu 1 121 -12 1622 164 12 0 chr10 12387608 12387864 -133201424 + AluJb SINE Alu 1 259 -53 287 243 136 21 chr10 12387870 12388010 -133201278 - MIR SINE MIR -14 248 93 31 58 0 0 chr10 12388012 12388064 -133201224 + AT_rich Low_complexity Low_complexity 1 52 0 457 250 145 30 chr10 12388430 12388630 -133200658 + MIR SINE MIR 32 254 -8 1207 153 0 0 chr10 12388691 12388874 -133200414 - AluSg/x SINE Alu 0 310 128 2135 107 3 7 chr10 12388903 12389203 -133200085 + AluSx SINE Alu 1 299 -13 180 250 0 0 chr10 12389494 12389558 -133199730 + CT-rich Low_complexity Low_complexity 4 67 0 477 219 17 17 chr10 12390021 12390140 -133199148 - L1MC5 LINE L1 -14 7947 7829 731 243 24 44 chr10 12390533 12390739 -133198549 - MER20 DNA MER1_type 0 219 18 1017 157 51 0 chr10 12390750 12390928 -133198360 - MER3 DNA MER1_type -22 187 1 2199 128 3 0 chr10 12391125 12391423 -133197865 + AluSp SINE Alu 1 299 -14 1801 166 10 3 chr10 12391467 12391757 -133197531 - AluJb SINE Alu -13 299 8 1840 148 33 10 chr10 12391773 12392077 -133197211 - AluSx SINE Alu -1 311 1 2159 101 11 0 chr10 12392486 12392764 -133196524 + AluSx SINE Alu 1 281 -31 378 0 0 0 chr10 12392764 12392806 -133196482 + (CA)n Simple_repeat Simple_repeat 1 42 0 2177 110 3 0 chr10 12392832 12393131 -133196157 + AluSq SINE Alu 1 300 -13 28 29 0 0 chr10 12393181 12393216 -133196072 + AT_rich Low_complexity Low_complexity 1 35 0 701 158 0 33 chr10 12393230 12393350 -133195938 - FLAM_C SINE Alu -15 118 3 587 236 93 6 chr10 12393488 12393649 -133195639 - MIR SINE MIR -39 223 49 2271 91 7 3 chr10 12394008 12394305 -133194983 - AluSx SINE Alu -13 299 2 2358 91 0 10 chr10 12394524 12394833 -133194455 + AluSc SINE Alu 1 306 -3 253 345 84 14 chr10 12395051 12395193 -133194095 + MIR SINE MIR 25 176 -86 25 0 0 0 chr10 12398573 12398598 -133190690 + AT_rich Low_complexity Low_complexity 1 25 0 2419 66 0 7 chr10 12398647 12398948 -133190340 + AluY SINE Alu 1 299 -12 2231 104 3 10 chr10 12399091 12399400 -133189888 + AluSx SINE Alu 6 312 0 2318 83 13 0 chr10 12400396 12400698 -133188590 + AluSq SINE Alu 1 306 -7 2170 99 7 0 chr10 12400925 12401236 -133188052 + AluSq SINE Alu 1 313 0 212 279 33 0 chr10 12401236 12401297 -133187991 + MIR SINE MIR 188 250 -12 916 281 145 24 chr10 12401500 12401619 -133187669 - L2 LINE L2 -997 2317 2214 2283 109 0 0 chr10 12401619 12401922 -133187366 + AluSq SINE Alu 1 303 -10 916 281 145 24 chr10 12401922 12402353 -133186935 - L2 LINE L2 -1100 2214 1700 1805 144 10 22 chr10 12402417 12402595 -133186693 - AluSx SINE Alu -3 309 135 1979 137 3 7 chr10 12402595 12402895 -133186393 - AluSx SINE Alu -13 299 1 1805 144 10 22 chr10 12402895 12403029 -133186259 - AluSx SINE Alu -177 135 1 460 287 65 19 chr10 12403035 12403251 -133186037 - L2 LINE L2 -1884 1430 1205 2030 96 26 33 chr10 12403251 12403393 -133185895 + AluSx SINE Alu 1 142 -170 2019 134 7 3 chr10 12403393 12403685 -133185603 + AluSx SINE Alu 4 296 -16 2030 96 26 33 chr10 12403685 12403844 -133185444 + AluSx SINE Alu 142 300 -12 487 114 0 0 chr10 12404144 12404214 -133185074 + AluSg/x SINE Alu 198 267 -45 1727 91 8 25 chr10 12404214 12404455 -133184833 - AluSg SINE Alu -73 237 1 2590 64 0 3 chr10 12404467 12404779 -133184509 - AluY SINE Alu 0 311 1 2048 126 11 0 chr10 12404846 12405132 -133184156 - AluSx SINE Alu -23 289 1 2275 112 0 3 chr10 12405809 12406112 -133183176 - AluSx SINE Alu -10 302 1 2183 118 0 0 chr10 12406682 12406969 -133182319 - AluSx SINE Alu -25 287 1 2238 106 0 3 chr10 12407208 12407510 -133181778 - AluSx SINE Alu -11 301 1 2449 68 0 16 chr10 12407815 12408126 -133181162 + AluY SINE Alu 5 310 -1 1810 135 10 30 chr10 12408310 12408607 -133180681 + MER47A DNA MER2_type 1 291 -75 1156 105 58 0 chr10 12408607 12408798 -133180490 - L1PA11 LINE L1 -1 6173 5972 2238 76 4 0 chr10 12408804 12409080 -133180208 - AluY SINE Alu -3 308 32 280 294 103 8 chr10 12409244 12409370 -133179918 + MIR SINE MIR 78 215 -47 1732 145 7 38 chr10 12409529 12409819 -133179469 + AluJb SINE Alu 1 281 -31 2017 129 3 3 chr10 12409829 12410140 -133179148 - AluY SINE Alu 0 311 1 754 171 0 0 chr10 12410343 12410466 -133178822 - AluSg/x SINE Alu -17 293 171 1474 82 0 0 chr10 12410567 12410749 -133178539 - AluY SINE Alu -129 182 1 2502 69 0 3 chr10 12411092 12411395 -133177893 + AluY SINE Alu 1 302 -9 2136 113 0 0 chr10 12411586 12411919 -133177369 + AluSx SINE Alu 1 333 0 732 174 0 0 chr10 12412153 12412268 -133177020 - FLAM_A SINE Alu -17 116 2 2188 91 7 0 chr10 12412336 12412623 -133176665 - AluY SINE Alu -21 290 2 264 75 0 0 chr10 12412857 12412897 -133176391 - Alu SINE Alu -1 301 262 227 208 0 0 chr10 12412908 12412956 -133176332 + A-rich Low_complexity Low_complexity 1 48 0 27 0 0 0 chr10 12413075 12413102 -133176186 + AT_rich Low_complexity Low_complexity 1 27 0 816 124 41 0 chr10 12413161 12413282 -133176006 + AluJo SINE Alu 12 137 -175 1095 62 0 0 chr10 12413284 12413412 -133175876 + AluY SINE Alu 5 132 -179 1163 139 6 0 chr10 12413467 12413640 -133175648 + AluSg/x SINE Alu 125 298 -12 1380 132 71 5 chr10 12413690 12413902 -133175386 - AluSg/x SINE Alu -11 299 74 1322 135 14 9 chr10 12414628 12414843 -133174445 + AluSp SINE Alu 86 301 -12 197 254 60 0 chr10 12415012 12415079 -133174209 + L2 LINE L2 2062 2132 -1182 2077 124 3 7 chr10 12415128 12415427 -133173861 - AluSx SINE Alu -14 298 1 2226 120 7 0 chr10 12415430 12415730 -133173558 - AluSg SINE Alu -8 302 1 242 116 14 43 chr10 12415730 12415799 -133173489 + (TC)n Simple_repeat Simple_repeat 2 68 0 1253 225 93 25 chr10 12415801 12416166 -133173122 + MLT1F1 LTR MaLR 177 566 -1 2023 157 0 0 chr10 12416197 12416496 -133172792 + AluJo SINE Alu 1 299 -13 696 206 22 22 chr10 12416655 12416791 -133172497 - AluJo SINE Alu -176 136 1 2114 120 0 7 chr10 12416810 12417111 -133172177 - AluSx SINE Alu -3 309 11 1022 271 204 21 chr10 12417500 12417556 -133171732 - L2 LINE L2 -1757 1557 1513 2387 99 0 6 chr10 12417556 12417868 -133171420 + AluSq SINE Alu 1 310 -3 1022 271 204 21 chr10 12417868 12418423 -133170865 - L2 LINE L2 -1801 1513 834 868 230 61 90 chr10 12418494 12418784 -133170504 + L1MC4a LINE L1 5458 5736 -2072 2455 68 3 10 chr10 12418784 12419092 -133170196 + AluY SINE Alu 1 306 -5 868 230 61 90 chr10 12419092 12419180 -133170108 + L1MC4a LINE L1 5736 5825 -1983 1226 167 0 10 chr10 12419183 12419375 -133169913 + AluJo SINE Alu 1 190 -122 971 161 12 0 chr10 12420362 12420523 -133168765 + AluSq SINE Alu 135 297 -16 1941 104 49 36 chr10 12420558 12420865 -133168423 - AluSq SINE Alu -2 311 1 352 310 6 25 chr10 12420893 12421051 -133168237 - L2 LINE L2 -2174 1140 986 2057 101 27 20 chr10 12421111 12421249 -133168039 + AluSx SINE Alu 1 137 -175 2051 130 7 3 chr10 12421249 12421542 -133167746 + AluSx SINE Alu 4 297 -15 2057 101 27 20 chr10 12421542 12421563 -133167725 + AluSx SINE Alu 137 299 -13 1068 73 0 0 chr10 12421563 12421700 -133167588 + AluSg/x SINE Alu 163 299 -13 604 312 42 17 chr10 12421855 12422092 -133167196 + MIR SINE MIR 20 262 0 1641 134 67 4 chr10 12422278 12422575 -133166713 + AluSq SINE Alu 1 285 -28 210 345 175 26 chr10 12422689 12422883 -133166405 + L2 LINE L2 2755 2977 -337 2209 77 25 0 chr10 12423064 12423350 -133165938 + AluSg SINE Alu 1 293 -17 2461 55 3 3 chr10 12423553 12423864 -133165424 + AluY SINE Alu 1 311 0 1700 147 0 38 chr10 12423873 12424165 -133165123 - AluJb SINE Alu -31 281 1 347 303 200 6 chr10 12424324 12424489 -133164799 - MIR SINE MIR -47 215 19 2154 79 0 0 chr10 12424614 12424894 -133164394 + AluY SINE Alu 32 311 0 194 274 48 48 chr10 12426202 12426286 -133163002 - MIR SINE MIR -86 176 93 221 337 6 25 chr10 12427668 12427831 -133161457 + CT-rich Low_complexity Low_complexity 5 164 0 420 138 0 58 chr10 12428301 12428334 -133160954 - AluSp SINE Alu -147 166 133 1891 130 7 7 chr10 12428334 12428633 -133160655 - AluSx SINE Alu -13 299 1 420 138 0 58 chr10 12428633 12428686 -133160602 - AluSp SINE Alu -180 133 85 28 29 0 0 chr10 12430856 12430891 -133158397 + AT_rich Low_complexity Low_complexity 1 35 0 1437 130 79 7 chr10 12430957 12431234 -133158054 - AluSg SINE Alu 0 300 4 243 88 0 0 chr10 12431572 12431606 -133157682 + (TGAA)n Simple_repeat Simple_repeat 3 36 0 722 57 0 71 chr10 12431871 12432012 -133157276 - AluSc SINE Alu -6 303 173 356 288 10 35 chr10 12432162 12432412 -133156876 + CT-rich Low_complexity Low_complexity 1 243 0 1966 92 6 63 chr10 12435307 12435623 -133153665 + AluY SINE Alu 1 298 -13 1032 174 85 9 chr10 12435668 12435880 -133153408 + AluJb SINE Alu 3 230 -82 180 200 0 0 chr10 12436715 12436755 -133152533 + A-rich Low_complexity Low_complexity 3 42 0 1479 180 24 7 chr10 12437032 12437327 -133151961 - AluJo SINE Alu -12 300 1 2147 117 0 0 chr10 12437473 12437773 -133151515 + AluSx SINE Alu 1 300 -12 270 0 0 0 chr10 12438440 12438470 -133150818 + (TG)n Simple_repeat Simple_repeat 1 30 0 1756 150 7 7 chr10 12438645 12438938 -133150350 - AluJo SINE Alu -19 293 1 1208 286 198 7 chr10 12438938 12439505 -133149783 + L2 LINE L2 1033 1707 -1607 1109 114 12 0 chr10 12439505 12439672 -133149616 + AluSx SINE Alu 1 169 -143 404 116 14 0 chr10 12439818 12439887 -133149401 + AluS SINE Alu 230 299 -10 2011 113 0 0 chr10 12440078 12440405 -133148883 + AluSx SINE Alu 1 327 0 545 129 35 0 chr10 12440807 12440892 -133148396 + FLAM_C SINE Alu 24 111 -32 216 0 0 0 chr10 12440939 12440963 -133148325 + (A)n Simple_repeat Simple_repeat 1 24 0 1988 123 0 23 chr10 12440963 12441265 -133148023 + AluSx SINE Alu 6 300 -12 1812 161 0 13 chr10 12441267 12441577 -133147711 + AluJb SINE Alu 1 306 -6 1933 147 10 0 chr10 12441577 12441877 -133147411 + AluSx SINE Alu 1 303 -9 607 103 0 0 chr10 12441888 12441966 -133147322 + U6 snRNA snRNA 1 78 -29 2181 123 0 0 chr10 12442037 12442339 -133146949 + AluSx SINE Alu 1 302 -10 834 195 61 6 chr10 12442341 12442505 -133146783 + AluSg/x SINE Alu 135 307 -3 503 185 167 0 chr10 12442726 12442834 -133146454 - MER96 DNA MER1_type? 0 175 50 1911 130 3 13 chr10 12442871 12443170 -133146118 + AluSx SINE Alu 1 296 -16 2346 46 0 0 chr10 12443172 12443457 -133145831 + AluY SINE Alu 1 285 -26 342 0 0 0 chr10 12443457 12443495 -133145793 + (CCAA)n Simple_repeat Simple_repeat 2 39 0 2140 101 3 0 chr10 12443663 12443959 -133145329 + AluSx SINE Alu 1 297 -15 432 130 0 0 chr10 12444157 12444226 -133145062 + Alu SINE Alu 234 302 -8 1612 175 20 0 chr10 12444322 12444614 -133144674 - AluJo SINE Alu -14 298 1 2087 126 0 0 chr10 12444760 12445061 -133144227 + AluSx SINE Alu 1 301 -11 198 0 0 0 chr10 12445726 12445748 -133143540 + (TG)n Simple_repeat Simple_repeat 1 22 0 1756 150 7 7 chr10 12445924 12446217 -133143071 - AluJo SINE Alu -19 293 1 1642 250 127 123 chr10 12446217 12446784 -133142504 + L2 LINE L2 1033 1596 -1718 1914 138 0 3 chr10 12446784 12447089 -133142199 + AluSx SINE Alu 1 304 -8 1642 250 127 123 chr10 12447089 12447186 -133142102 + L2 LINE L2 1596 1691 -1623 1782 150 7 26 chr10 12447186 12447493 -133141795 - AluSx SINE Alu -11 301 1 1642 250 127 123 chr10 12447493 12447507 -133141781 + L2 LINE L2 1691 1703 -1611 1180 176 30 4 chr10 12447507 12447740 -133141548 + L1MA7 LINE L1 6049 6287 -4 1642 250 127 123 chr10 12447740 12447780 -133141508 + L2 LINE L2 1703 1741 -1573 1280 122 61 65 chr10 12447780 12447942 -133141346 + MER30 DNA MER1_type 1 163 -67 2234 79 3 0 chr10 12447942 12448234 -133141054 - AluY SINE Alu -18 293 1 1280 122 61 65 chr10 12448234 12448300 -133140988 + MER30 DNA MER1_type 163 228 -2 1642 250 127 123 chr10 12448300 12448423 -133140865 + L2 LINE L2 1741 1862 -1452 195 42 0 0 chr10 12448423 12448447 -133140841 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 792 74 0 0 chr10 12448450 12448545 -133140743 - FLAM_C SINE Alu -24 119 25 1642 250 127 123 chr10 12448545 12448832 -133140456 + L2 LINE L2 1863 2268 -1046 242 229 16 0 chr10 12448933 12448994 -133140294 + (TCTA)n Simple_repeat Simple_repeat 4 65 0 380 264 25 126 chr10 12449028 12449072 -133140216 + L1MC4 LINE L1 7826 7873 -169 1803 129 32 4 chr10 12449072 12449382 -133139906 - AluSx SINE Alu 0 318 1 380 264 25 126 chr10 12449382 12449574 -133139714 + L1MC4 LINE L1 7873 8040 -2 187 203 34 85 chr10 12449661 12449674 -133139614 + MER5A DNA MER1_type 134 146 -43 1926 131 3 7 chr10 12449674 12449979 -133139309 + AluSx SINE Alu 1 304 -8 187 203 34 85 chr10 12449979 12450024 -133139264 + MER5A DNA MER1_type 146 189 0 2030 127 0 0 chr10 12450537 12450829 -133138459 + AluSx SINE Alu 1 292 -20 2282 87 0 6 chr10 12450969 12451281 -133138007 + AluY SINE Alu 1 310 -1 2194 109 3 0 chr10 12452130 12452441 -133136847 - AluSq SINE Alu -1 312 1 1782 139 38 7 chr10 12452648 12452935 -133136353 + AluJo SINE Alu 1 296 -16 1759 114 57 0 chr10 12453120 12453383 -133135905 + AluSx SINE Alu 26 303 -9 279 207 171 64 chr10 12453402 12453542 -133135746 + L1MC4 LINE L1 7744 7898 -144 758 168 0 0 chr10 12453544 12453669 -133135619 + AluJb SINE Alu 184 308 -4 1977 176 18 18 chr10 12453747 12453781 -133135507 + L1MB7 LINE L1 5794 5827 -357 1770 160 17 0 chr10 12453781 12454069 -133135219 + AluSx SINE Alu 1 293 -19 1977 176 18 18 chr10 12454069 12454425 -133134863 + L1MB7 LINE L1 5826 6184 0 1406 198 7 4 chr10 12454439 12454717 -133134571 + AluJo SINE Alu 1 279 -33 372 43 0 0 chr10 12454717 12454763 -133134525 + (CA)n Simple_repeat Simple_repeat 1 46 0 1990 124 11 0 chr10 12455032 12455314 -133133974 - AluSx SINE Alu -27 285 1 1180 176 30 4 chr10 12455328 12455561 -133133727 + L1MA7 LINE L1 6049 6287 -4 1107 96 78 6 chr10 12455603 12455769 -133133519 + MER30 DNA MER1_type 1 178 -52 314 125 0 0 chr10 12455873 12455921 -133133367 + Alu SINE Alu 252 299 -3 1961 179 18 18 chr10 12456008 12456042 -133133246 + L1MB7 LINE L1 5794 5827 -357 1770 160 17 0 chr10 12456042 12456330 -133132958 + AluSx SINE Alu 1 293 -19 1961 179 18 18 chr10 12456330 12456686 -133132602 + L1MB7 LINE L1 5826 6184 0 355 160 0 0 chr10 12456700 12456750 -133132538 + Alu SINE Alu 1 50 -251 896 106 0 0 chr10 12456751 12456874 -133132414 + AluSg/x SINE Alu 159 281 -29 243 88 0 0 chr10 12456874 12456908 -133132380 + (TGAA)n Simple_repeat Simple_repeat 3 36 0 2293 96 0 0 chr10 12457173 12457476 -133131812 - AluSc SINE Alu -6 303 1 1530 204 7 3 chr10 12457718 12458017 -133131271 + AluSx SINE Alu 1 300 -12 2061 84 66 0 chr10 12459058 12459345 -133129943 + AluSg SINE Alu 1 306 -4 2035 126 3 0 chr10 12459538 12459840 -133129448 + AluSx SINE Alu 1 303 -9 1104 145 0 25 chr10 12460671 12460871 -133128417 - AluSx SINE Alu -117 195 1 267 257 111 42 chr10 12460871 12461015 -133128273 + L1ME3A LINE L1 5922 6075 -95 1667 187 3 7 chr10 12461077 12461387 -133127901 - AluJo SINE Alu -3 309 1 2084 115 3 0 chr10 12461416 12461712 -133127576 + AluSx SINE Alu 6 302 -10 420 235 0 0 chr10 12461774 12461855 -133127433 - MER81 DNA DNA -33 81 1 194 241 19 19 chr10 12462139 12462193 -133127095 + L2 LINE L2 3256 3309 -4 2108 125 0 3 chr10 12462705 12463016 -133126272 + AluSq SINE Alu 4 313 0 593 195 0 8 chr10 12463044 12463162 -133126126 + L1MB5 LINE L1 6050 6166 -8 31 44 0 0 chr10 12463181 12463226 -133126062 + AT_rich Low_complexity Low_complexity 1 45 0 1352 154 135 0 chr10 12463626 12463893 -133125395 + AluJb SINE Alu 1 303 -9 430 208 21 0 chr10 12464146 12464242 -133125046 - Charlie5 DNA MER1_type -27 2585 2488 1239 101 6 0 chr10 12464242 12464420 -133124868 - AluSg/x SINE Alu -5 305 127 1682 82 0 43 chr10 12464433 12464715 -133124573 - AluY SINE Alu 0 311 42 1863 110 3 69 chr10 12465046 12465228 -133124060 - AluSx SINE Alu -14 298 144 2554 36 3 0 chr10 12465228 12465537 -133123751 - AluY SINE Alu -1 310 1 1863 110 3 69 chr10 12465537 12465672 -133123616 - AluSx SINE Alu -168 144 2 896 190 39 3 chr10 12465672 12465900 -133123388 - MER33 DNA MER1_type -259 65 1 1671 129 0 30 chr10 12466128 12466392 -133122896 + AluSx SINE Alu 1 256 -56 1815 128 0 62 chr10 12466434 12466740 -133122548 + AluSx SINE Alu 3 289 -23 506 251 157 45 chr10 12467115 12467338 -133121950 + MIR SINE MIR 15 262 0 1353 177 29 42 chr10 12467588 12467727 -133121561 + AluJb SINE Alu 1 140 -172 2189 107 0 0 chr10 12467727 12468025 -133121263 + AluSq SINE Alu 1 298 -15 1353 177 29 42 chr10 12468025 12468195 -133121093 + AluJb SINE Alu 140 306 -6 810 132 0 21 chr10 12468243 12468387 -133120901 - AluSp/q SINE Alu -6 307 167 29 70 0 0 chr10 12469468 12469525 -133119763 + GC_rich Low_complexity Low_complexity 1 57 0 1127 133 40 0 chr10 12469571 12469744 -133119544 - AluY SINE Alu -129 182 3 1573 128 163 4 chr10 12469969 12470227 -133119061 + AluSx SINE Alu 1 299 -3 24 0 0 0 chr10 12470263 12470287 -133119001 + AT_rich Low_complexity Low_complexity 1 24 0 860 171 0 74 chr10 12470582 12470758 -133118530 - AluSg/x SINE Alu -13 299 137 2311 167 18 58 chr10 12470913 12471095 -133118193 + L1MA4 LINE L1 5768 5956 -344 2136 102 0 7 chr10 12471095 12471398 -133117890 + AluSq SINE Alu 1 301 -12 2311 167 18 58 chr10 12471398 12471766 -133117522 + L1MA4 LINE L1 5956 6296 -4 1537 167 7 24 chr10 12471871 12472182 -133117106 - AluJo SINE Alu 0 306 1 21 0 0 0 chr10 12472182 12472203 -133117085 + AT_rich Low_complexity Low_complexity 1 21 0 825 174 0 0 chr10 12472210 12472342 -133116946 + FRAM SINE Alu 9 140 -36 816 165 7 14 chr10 12472355 12472538 -133116750 + AluSg/x SINE Alu 156 296 -16 203 286 96 70 chr10 12472646 12472845 -133116443 - L2 LINE L2 -5 3308 3105 1905 126 17 0 chr10 12472948 12473242 -133116046 + AluSx SINE Alu 1 299 -13 825 160 17 40 chr10 12473419 12473594 -133115694 - AluJo SINE Alu -57 255 85 363 216 82 10 chr10 12473829 12473926 -133115362 + MLT1G3 LTR MaLR 1 104 -491 440 197 210 4 chr10 12473982 12474170 -133115118 + MLT1G3 LTR MaLR 170 442 -148 1739 165 0 19 chr10 12474257 12474573 -133114715 + AluJo SINE Alu 1 310 -2 2518 39 0 13 chr10 12474752 12475063 -133114225 + AluY SINE Alu 1 307 -4 209 218 0 46 chr10 12475438 12475525 -133113763 + (CGGGG)n Simple_repeat Simple_repeat 2 84 0 494 55 96 0 chr10 12476590 12476663 -133112625 + MADE1 DNA Mariner 1 80 0 2037 107 0 0 chr10 12476733 12477023 -133112265 + AluSx SINE Alu 5 294 -18 601 84 21 0 chr10 12477519 12477614 -133111674 - AluY SINE Alu -2 309 213 988 108 0 0 chr10 12477770 12477918 -133111370 + AluSg/x SINE Alu 149 296 -14 2022 130 0 0 chr10 12477933 12478232 -133111056 + AluSx SINE Alu 1 299 -13 2361 32 0 3 chr10 12479604 12479909 -133109379 - AluY SINE Alu 0 304 1 1415 91 5 23 chr10 12480373 12480593 -133108695 + AluSg/x SINE Alu 87 302 -8 1920 74 19 11 chr10 12480707 12480977 -133108311 + L1PA8 LINE L1 5895 6166 -6 24 0 0 0 chr10 12480977 12481001 -133108287 + AT_rich Low_complexity Low_complexity 1 24 0 2046 185 5 20 chr10 12481111 12481516 -133107772 - L1PB4 LINE L1 0 6156 5758 192 217 0 0 chr10 12481526 12481572 -133107716 + (TG)n Simple_repeat Simple_repeat 1 46 0 1458 166 19 60 chr10 12481957 12482127 -133107161 - AluSx SINE Alu 0 302 149 1645 145 4 22 chr10 12482127 12482270 -133107018 - AluSx SINE Alu -37 275 138 2085 128 3 0 chr10 12482270 12482582 -133106706 - AluSq SINE Alu 0 313 1 1645 145 4 22 chr10 12482582 12482714 -133106574 - AluSx SINE Alu -174 138 5 1458 166 19 60 chr10 12482714 12482857 -133106431 - AluSx SINE Alu -153 149 2 1391 185 57 10 chr10 12482959 12483257 -133106031 - AluJb SINE Alu 0 312 1 190 269 0 0 chr10 12483323 12483375 -133105913 + MIR SINE MIR 156 207 -55 1999 120 3 0 chr10 12483377 12483661 -133105627 + AluSx SINE Alu 1 285 -27 225 83 0 0 chr10 12483661 12483697 -133105591 + (CATA)n Simple_repeat Simple_repeat 2 37 0 2049 222 67 39 chr10 12484038 12484605 -133104683 - L1ME2 LINE L1 -12 6152 5564 2085 96 0 0 chr10 12484605 12484914 -133104374 - AluSx SINE Alu 0 309 1 2049 222 67 39 chr10 12484914 12484958 -133104330 - L1ME2 LINE L1 -600 5564 5523 2195 83 0 32 chr10 12485184 12485318 -133103970 + AluSx SINE Alu 2 139 -173 2352 77 0 0 chr10 12485318 12485628 -133103660 + AluY SINE Alu 1 310 -1 2195 83 0 32 chr10 12485628 12485805 -133103483 + AluSx SINE Alu 139 303 -9 496 295 115 53 chr10 12485805 12486127 -133103161 - MER93a LTR ERV1 -60 342 1 2004 110 0 17 chr10 12486425 12486715 -133102573 - AluY SINE Alu -26 285 1 1940 137 0 0 chr10 12486716 12487015 -133102273 - AluSx SINE Alu -13 299 1 341 221 61 72 chr10 12487343 12487524 -133101764 - L1ME4a LINE L1 -16 6105 5927 869 204 57 28 chr10 12487539 12487658 -133101630 - MER20 DNA MER1_type -1 218 89 1766 178 58 76 chr10 12487658 12488108 -133101180 - LTR47B LTR ERVL 0 443 2 869 204 57 28 chr10 12488108 12488199 -133101089 - MER20 DNA MER1_type -130 89 2 261 235 61 31 chr10 12488200 12488298 -133100990 - L1ME4a LINE L1 -238 5883 5783 452 218 55 0 chr10 12488413 12488523 -133100765 - L1MB2 LINE L1 0 6171 6056 230 211 10 77 chr10 12488559 12488663 -133100625 + T-rich Low_complexity Low_complexity 6 102 0 809 89 27 0 chr10 12488778 12488890 -133100398 - AluSg/x SINE Alu -19 291 177 2078 108 7 0 chr10 12489272 12489558 -133099730 + AluSx SINE Alu 5 292 -20 1064 145 62 10 chr10 12489744 12489937 -133099351 - AluJo SINE Alu -109 203 1 267 187 45 75 chr10 12490124 12490258 -133099030 - L1ME4a LINE L1 -152 5969 5840 520 254 31 15 chr10 12490291 12490421 -133098867 - L2 LINE L2 -2 3311 3180 553 256 63 74 chr10 12490423 12490586 -133098702 - L2 LINE L2 -251 3062 2895 1703 151 7 3 chr10 12490586 12490877 -133098411 + AluJb SINE Alu 1 292 -20 553 256 63 74 chr10 12490877 12491031 -133098257 - L2 LINE L2 -418 2895 2741 631 279 113 38 chr10 12491073 12491464 -133097824 - L1ME4a LINE L1 -388 5733 5314 469 231 0 0 chr10 12491481 12491585 -133097703 + U13 snRNA snRNA 1 104 0 207 0 0 0 chr10 12491831 12491854 -133097434 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 1900 113 7 4 chr10 12491863 12492138 -133097150 - AluSq SINE Alu -37 276 1 571 302 97 73 chr10 12492299 12492326 -133096962 - L1ME4a LINE L1 -812 5334 5309 2435 64 0 3 chr10 12492326 12492638 -133096650 - AluY SINE Alu 0 311 1 571 302 97 73 chr10 12492638 12492715 -133096573 - L1ME4a LINE L1 -837 5309 5235 1629 178 10 0 chr10 12492715 12493008 -133096280 - AluJb SINE Alu -13 299 4 571 302 97 73 chr10 12493008 12493223 -133096065 - L1ME4a LINE L1 -911 5235 4995 2033 128 7 0 chr10 12493223 12493521 -133095767 + AluSx SINE Alu 1 300 -12 571 302 97 73 chr10 12493521 12493703 -133095585 - L1ME4a LINE L1 -1151 4995 4819 2275 77 0 13 chr10 12493760 12494059 -133095229 - AluSg SINE Alu -15 295 1 2260 102 3 0 chr10 12494060 12494365 -133094923 - AluSp SINE Alu -7 306 1 1936 96 57 7 chr10 12494365 12494644 -133094644 - AluSc SINE Alu -15 294 1 2047 122 3 0 chr10 12494905 12495209 -133094079 - AluSx SINE Alu -7 305 1 673 278 82 11 chr10 12496047 12496328 -133092960 + HsTC2 DNA Tc2 4 304 -1594 506 196 116 32 chr10 12496310 12496499 -133092789 + HsTC2 DNA Tc2 1692 1896 -2 * 2258 74 0 7 chr10 12496597 12496895 -133092393 - AluSg SINE Alu -14 296 1 2371 81 0 0 chr10 12497121 12497430 -133091858 - AluSc SINE Alu 0 309 1 953 95 0 95 chr10 12497568 12497736 -133091552 - AluSp/q SINE Alu -4 309 158 1930 125 14 0 chr10 12497911 12498200 -133091088 - AluSx SINE Alu -19 293 1 1315 110 24 125 chr10 12498365 12498693 -133090595 + AluSg SINE Alu 1 295 -15 259 167 21 0 chr10 12499575 12499623 -133089665 - MER112 DNA MER1_type -108 152 104 339 209 70 85 chr10 12500956 12501085 -133088203 - L1ME LINE L1 -304 5817 5691 1199 116 0 0 chr10 12502950 12503122 -133086166 - AluSq SINE Alu -8 305 134 2211 91 3 3 chr10 12503122 12503420 -133085868 - AluSc SINE Alu -11 298 1 2096 116 3 0 chr10 12504068 12504369 -133084919 + AluSx SINE Alu 1 302 -10 1112 43 7 0 chr10 12504591 12504731 -133084557 - AluY SINE Alu -6 305 165 202 266 16 16 chr10 12504865 12504929 -133084359 + GA-rich Low_complexity Low_complexity 4 67 0 1678 118 23 59 chr10 12505177 12505483 -133083805 + AluSx SINE Alu 7 301 -11 982 157 0 0 chr10 12505483 12505636 -133083652 + AluSg/x SINE Alu 132 284 -26 234 0 0 0 chr10 12505636 12505662 -133083626 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 2242 93 0 3 chr10 12506024 12506326 -133082962 - AluSx SINE Alu -11 301 1 1274 39 0 0 chr10 12506384 12506540 -133082748 - AluY SINE Alu -13 298 143 1460 223 0 13 chr10 12506668 12506978 -133082310 + AluJo SINE Alu 1 306 -6 647 74 0 11 chr10 12506978 12507073 -133082215 + (GGAA)n Simple_repeat Simple_repeat 1 94 0 2231 111 0 0 chr10 12507462 12507769 -133081519 + AluSx SINE Alu 1 307 -5 2024 116 0 3 chr10 12508548 12508841 -133080447 + AluSx SINE Alu 1 292 -20 1393 171 22 67 chr10 12508942 12509257 -133080031 - AluJo SINE Alu -11 301 1 1620 180 0 3 chr10 12509308 12509603 -133079685 - AluJo SINE Alu -18 294 1 2022 107 21 0 chr10 12510446 12510727 -133078561 + AluSx SINE Alu 1 287 -25 724 83 10 0 chr10 12510812 12510908 -133078380 + AluY SINE Alu 2 98 -213 2119 111 10 0 chr10 12510914 12511221 -133078067 + AluY SINE Alu 1 310 -1 36 23 0 0 chr10 12511222 12511265 -133078023 + AT_rich Low_complexity Low_complexity 1 43 0 1372 111 5 0 chr10 12511265 12511454 -133077834 + AluSc SINE Alu 1 190 -119 31 0 0 0 chr10 12511463 12511494 -133077794 + AT_rich Low_complexity Low_complexity 1 31 0 1627 128 6 98 chr10 12511508 12511836 -133077452 - AluSx SINE Alu -14 298 1 1453 117 0 0 chr10 12512113 12512319 -133076969 - AluSg/x SINE Alu -20 290 85 2236 89 0 0 chr10 12512372 12512664 -133076624 - AluSp SINE Alu -21 292 1 37 23 0 0 chr10 12513084 12513128 -133076160 + AT_rich Low_complexity Low_complexity 1 44 0 2087 96 3 0 chr10 12513211 12513515 -133075773 + AluSx SINE Alu 1 305 0 2000 100 4 4 chr10 12513699 12513980 -133075308 - AluSq SINE Alu -32 281 1 1424 90 33 94 chr10 12514005 12514250 -133075038 - MER30 DNA MER1_type 0 230 1 2119 66 0 69 chr10 12514258 12514578 -133074710 - AluY SINE Alu -13 298 1 372 240 0 50 chr10 12514854 12514954 -133074334 + MLT1H1 LTR MaLR 461 555 0 283 288 224 0 chr10 12515113 12515262 -133074026 + MIR SINE MIR 30 208 -54 1774 158 7 10 chr10 12515285 12515589 -133073699 - AluJb SINE Alu -9 303 1 1429 150 33 48 chr10 12516063 12516137 -133073151 - AluJb SINE Alu -7 305 231 2094 54 98 4 chr10 12516137 12516414 -133072874 - AluY SINE Alu -8 303 1 1429 150 33 48 chr10 12516414 12516612 -133072676 - AluJb SINE Alu -81 231 37 2021 129 3 0 chr10 12516692 12517002 -133072286 - AluY SINE Alu 0 311 1 2132 81 0 62 chr10 12517113 12517434 -133071854 - AluY SINE Alu -10 301 1 239 364 108 0 chr10 12517517 12517693 -133071595 + L3 LINE CR1 509 703 -874 2220 96 3 3 chr10 12517742 12518045 -133071243 - AluSc SINE Alu -6 303 1 302 343 37 0 chr10 12518048 12518182 -133071106 + L2 LINE L2 1984 2122 -1192 854 188 30 6 chr10 12518182 12518347 -133070941 + FRAM SINE Alu 1 167 -9 1551 131 62 0 chr10 12518510 12518754 -133070534 + AluSx SINE Alu 43 301 -11 1157 127 6 0 chr10 12518804 12518977 -133070311 - AluSg/x SINE Alu -12 300 127 2133 126 0 0 chr10 12518981 12519290 -133069998 - AluSx SINE Alu -3 309 1 324 294 174 38 chr10 12519511 12519776 -133069512 + L2 LINE L2 210 510 -2804 1988 116 3 32 chr10 12519896 12520207 -133069081 + AluSq SINE Alu 1 302 -11 313 247 94 88 chr10 12520328 12520440 -133068848 + L1ME4a LINE L1 5927 6042 -79 757 128 0 108 chr10 12520440 12520477 -133068811 - FLAM_A SINE Alu -169 133 94 2197 85 7 0 chr10 12520477 12520770 -133068518 + AluY SINE Alu 1 295 -16 757 128 0 108 chr10 12520770 12520880 -133068408 - FLAM_A SINE Alu -208 94 2 313 247 94 88 chr10 12520880 12520937 -133068351 + L1ME4a LINE L1 6042 6097 -24 2019 71 3 27 chr10 12520947 12521244 -133068044 - AluY SINE Alu -21 290 1 1624 156 7 10 chr10 12521373 12521661 -133067627 + AluJo SINE Alu 1 287 -25 1538 157 0 30 chr10 12523129 12523428 -133065860 + AluJo SINE Alu 7 296 -16 2022 117 0 16 chr10 12523428 12523709 -133065579 + AluSc SINE Alu 1 285 -24 223 37 0 0 chr10 12523709 12523736 -133065552 + (TAAA)n Simple_repeat Simple_repeat 2 180 0 2022 117 0 16 chr10 12523736 12523761 -133065527 + AluSc SINE Alu 285 309 0 381 281 21 0 chr10 12523837 12523933 -133065355 + MER106A DNA MER1_type 2 99 -137 378 205 145 51 chr10 12524484 12524601 -133064687 - MER5B DNA MER1_type 0 178 51 1805 164 157 5 chr10 12524603 12525036 -133064252 - L1MB8 LINE L1 0 6178 5680 536 230 52 0 chr10 12525039 12525174 -133064114 - L1MB8 LINE L1 -588 5586 5445 565 135 58 19 chr10 12525174 12525278 -133064010 - AluJo/FRAM SINE Alu -70 242 135 2068 124 3 0 chr10 12525280 12525587 -133063701 - AluSg SINE Alu 0 310 3 327 233 12 23 chr10 12525588 12525674 -133063614 - L1MB8 LINE L1 -1184 4962 4878 277 115 77 19 chr10 12525798 12525850 -133063438 - MER5B DNA MER1_type -123 55 1 369 109 0 0 chr10 12527006 12527061 -133062227 + (TCC)n Simple_repeat Simple_repeat 2 56 0 186 313 0 45 chr10 12529835 12529902 -133059386 - L2 LINE L2 -6 3266 3203 2186 81 7 7 chr10 12529995 12530291 -133058997 - AluSc SINE Alu -13 296 1 2185 104 3 0 chr10 12530722 12531030 -133058258 - AluSx SINE Alu -3 309 1 745 182 46 36 chr10 12533117 12533375 -133055913 - L1MB4 LINE L1 -5 6175 5899 787 227 116 5 chr10 12533412 12533619 -133055669 - L1MB4 LINE L1 -390 5790 5561 2077 116 0 0 chr10 12533649 12533991 -133055297 - AluSx SINE Alu 0 343 2 638 106 163 32 chr10 12534249 12534372 -133054916 - FRAM SINE Alu -17 159 21 2027 74 35 18 chr10 12535186 12535470 -133053818 - AluSq SINE Alu -24 289 1 2174 92 0 7 chr10 12535839 12536133 -133053155 - AluSg1 SINE Alu -17 292 1 1942 129 0 35 chr10 12536233 12536544 -133052744 - AluSx SINE Alu -12 300 1 1992 109 3 3 chr10 12537005 12537320 -133051968 + AluSq SINE Alu 1 315 0 1651 164 14 7 chr10 12537331 12537618 -133051670 + AluJb SINE Alu 1 289 -23 520 163 16 10 chr10 12537622 12537868 -133051420 + AluJb SINE Alu 3 298 -14 314 91 0 26 chr10 12537894 12537955 -133051333 + AluSp SINE Alu 1 38 -264 1755 89 4 0 chr10 12537955 12538191 -133051097 + AluSp SINE Alu 71 307 -6 2100 124 0 0 chr10 12538291 12538590 -133050698 + AluSx SINE Alu 1 299 -13 2177 108 0 0 chr10 12538809 12539104 -133050184 + AluSx SINE Alu 1 295 -17 2294 84 0 0 chr10 12539207 12539516 -133049772 + AluY SINE Alu 1 309 -2 232 310 46 11 chr10 12542686 12542773 -133046515 + MIR3 SINE MIR 104 193 -15 1784 144 54 30 chr10 12543017 12543350 -133045938 - MER2 DNA MER2_type -3 341 1 475 146 49 0 chr10 12543352 12543434 -133045854 - Tigger4(Zombi) DNA MER2_type 0 2731 2646 * 1190 188 39 8 chr10 12543431 12543665 -133045623 - Tigger4(Zombi) DNA MER2_type -2288 443 203 934 132 0 0 chr10 12543665 12543801 -133045487 + AluJo SINE Alu 1 136 -176 1652 168 30 3 chr10 12543825 12544122 -133045166 + AluSx SINE Alu 1 305 -7 1064 191 44 10 chr10 12544123 12544327 -133044961 - Tigger4(Zombi) DNA MER2_type -2520 211 1 258 299 72 21 chr10 12544534 12544631 -133044657 + MER5A DNA MER1_type 67 168 -21 231 346 48 10 chr10 12544542 12544646 -133044642 - MER5B DNA MER1_type -64 114 7 * 2249 98 0 0 chr10 12544702 12545007 -133044281 - AluSx SINE Alu -7 305 1 410 252 83 54 chr10 12545813 12546012 -133043276 - L1ME4a LINE L1 -261 5860 5649 1941 107 16 44 chr10 12546012 12546331 -133042957 - AluSx SINE Alu -2 310 1 410 252 83 54 chr10 12546331 12546409 -133042879 - L1ME4a LINE L1 -472 5649 5575 317 238 0 111 chr10 12547199 12547325 -133041963 + L1ME3A LINE L1 5988 6099 -71 2162 104 10 0 chr10 12548590 12548898 -133040390 - AluSx SINE Alu -1 311 1 1554 176 0 21 chr10 12549014 12549304 -133039984 - AluJb SINE Alu -24 288 5 225 237 66 40 chr10 12549335 12549411 -133039877 - HAL1 LINE L1 -9 2498 2421 796 238 18 35 chr10 12549452 12549679 -133039609 - HAL1 LINE L1 -846 1661 1439 394 196 29 80 chr10 12549700 12549838 -133039450 - HAL1 LINE L1 -1140 1367 1237 1171 154 103 26 chr10 12549846 12550079 -133039209 + AluJb SINE Alu 1 251 -61 2011 89 0 35 chr10 12550415 12550728 -133038560 + AluSc SINE Alu 1 302 -7 482 287 63 30 chr10 12550742 12550979 -133038309 - L2 LINE L2 -87 3226 2982 2154 96 3 0 chr10 12551089 12551381 -133037907 - AluSq SINE Alu -20 293 1 2250 73 14 0 chr10 12551870 12552159 -133037129 - AluY SINE Alu -13 298 6 1571 114 0 0 chr10 12552582 12552801 -133036487 - AluSx SINE Alu -10 300 82 565 143 0 0 chr10 12552902 12552986 -133036302 - AluSx SINE Alu -227 85 2 2171 78 3 10 chr10 12553180 12553505 -133035783 + AluY SINE Alu 1 311 0 584 200 17 8 chr10 12553696 12553816 -133035472 + FLAM_A SINE Alu 14 134 -8 765 119 0 0 chr10 12554275 12554412 -133034876 + AluSc SINE Alu 174 310 0 24 53 0 0 chr10 12554610 12554648 -133034640 + AT_rich Low_complexity Low_complexity 1 38 0 1877 126 17 7 chr10 12554650 12554943 -133034345 + AluSx SINE Alu 1 296 -16 187 369 46 15 chr10 12555314 12555444 -133033844 - L2 LINE L2 -911 2403 2270 2082 66 13 33 chr10 12555948 12556253 -133033035 - AluSx SINE Alu -13 299 1 1957 105 14 3 chr10 12556958 12557253 -133032035 + AluSx SINE Alu 1 298 -14 919 175 113 16 chr10 12558755 12559012 -133030276 + L1MA8 LINE L1 6000 6281 -10 2311 58 0 7 chr10 12559460 12559755 -133029533 - AluY SINE Alu -18 293 1 342 129 0 48 chr10 12559802 12559864 -133029424 - Alu SINE Alu -11 290 232 34 24 0 0 chr10 12559864 12559905 -133029383 + AT_rich Low_complexity Low_complexity 1 41 0 720 224 213 12 chr10 12561406 12561660 -133027628 + L2 LINE L2 3008 3312 -1 2233 89 3 0 chr10 12561895 12562198 -133027090 - AluY SINE Alu -6 305 2 2094 128 3 0 chr10 12562199 12562504 -133026784 - AluSx SINE Alu -6 306 1 1830 139 13 3 chr10 12563126 12563429 -133025859 + AluSx SINE Alu 6 311 -1 1544 102 0 0 chr10 12563718 12563923 -133025365 - AluSc SINE Alu -104 205 1 1004 96 0 0 chr10 12563923 12564058 -133025230 - AluSq/x SINE Alu -178 135 1 1957 125 6 19 chr10 12564392 12564703 -133024585 - AluSq SINE Alu 0 313 7 1863 86 0 4 chr10 12564881 12565125 -133024163 - AluSq SINE Alu -57 256 14 339 315 21 55 chr10 12565157 12565198 -133024090 + HAL1 LINE L1 1526 1567 -940 1575 159 35 21 chr10 12565198 12565487 -133023801 - AluJo SINE Alu -19 293 1 339 315 21 55 chr10 12565487 12565683 -133023605 + HAL1 LINE L1 1567 1755 -752 2133 104 0 3 chr10 12565708 12565997 -133023291 + AluSx SINE Alu 1 288 -24 32 0 0 0 chr10 12565998 12566030 -133023258 + AT_rich Low_complexity Low_complexity 1 32 0 482 153 0 24 chr10 12567031 12567116 -133022172 - FLAM_C SINE Alu -3 140 58 2213 122 0 0 chr10 12567262 12567574 -133021714 + AluSx SINE Alu 1 312 0 208 265 0 0 chr10 12567734 12567783 -133021505 - L2 LINE L2 -3 3269 3221 2219 99 7 0 chr10 12568263 12568565 -133020723 + AluSg SINE Alu 1 304 -6 840 114 15 0 chr10 12568695 12568826 -133020462 - AluSc SINE Alu -2 307 175 439 321 78 5 chr10 12568826 12568908 -133020380 + L3 LINE CR1 1370 1445 -132 1924 143 0 3 chr10 12568908 12569216 -133020072 - AluSx SINE Alu -5 307 1 439 321 78 5 chr10 12569216 12569326 -133019962 + L3 LINE CR1 1445 1576 -1 1917 144 7 0 chr10 12569917 12570216 -133019072 + AluSx SINE Alu 1 301 -11 679 138 0 0 chr10 12570235 12570329 -133018959 + FLAM_C SINE Alu 25 118 -25 33 25 0 0 chr10 12570329 12570369 -133018919 + AT_rich Low_complexity Low_complexity 1 40 0 2189 102 7 0 chr10 12570384 12570689 -133018599 + AluSc SINE Alu 1 307 -2 2159 89 0 16 chr10 12570891 12571215 -133018073 - AluY SINE Alu 0 319 1 371 269 0 0 chr10 12571219 12571297 -133017991 - AluYb8 SINE Alu -11 297 220 2199 101 7 0 chr10 12571424 12571720 -133017568 + AluSg SINE Alu 13 310 0 1944 141 0 3 chr10 12571940 12572237 -133017051 + AluJo SINE Alu 1 296 -16 307 217 90 107 chr10 12572431 12572639 -133016649 - L1ME4a LINE L1 -50 6071 5861 2168 102 7 0 chr10 12572639 12572943 -133016345 - AluSg SINE Alu 0 310 5 2241 95 3 0 chr10 12572946 12573250 -133016038 - AluSp SINE Alu -8 305 1 307 217 90 107 chr10 12573250 12573281 -133016007 - L1ME4a LINE L1 -262 5859 5829 2212 92 0 3 chr10 12573281 12573575 -133015713 - AluSc SINE Alu -16 293 1 307 217 90 107 chr10 12573575 12573629 -133015659 - L1ME4a LINE L1 -292 5829 5778 333 0 0 0 chr10 12573631 12573668 -133015620 + (TG)n Simple_repeat Simple_repeat 2 38 0 2375 100 3 0 chr10 12574286 12574595 -133014693 - AluSp SINE Alu 0 313 4 306 258 50 88 chr10 12574685 12574831 -133014457 + MER5A DNA MER1_type 8 147 -42 2362 93 0 0 chr10 12574831 12575142 -133014146 - L1PA7 LINE L1 -2 6152 5842 306 258 50 88 chr10 12575142 12575177 -133014111 + MER5A DNA MER1_type 147 182 -7 222 62 0 0 chr10 12575226 12575258 -133014030 + (TTG)n Simple_repeat Simple_repeat 2 33 0 1851 131 0 54 chr10 12575261 12575558 -133013730 - AluSx SINE Alu -31 281 1 2189 115 23 3 chr10 12575839 12576143 -133013145 - AluSg SINE Alu 0 310 1 422 217 12 0 chr10 12576291 12576374 -133012914 - L1ME4a LINE L1 -414 5707 5624 302 61 20 0 chr10 12576936 12576985 -133012303 + (TG)n Simple_repeat Simple_repeat 2 51 0 495 120 0 27 chr10 12576989 12577064 -133012224 - FLAM_A SINE Alu -25 117 45 2185 91 7 17 chr10 12577295 12577592 -133011696 - AluSg SINE Alu -16 294 1 1055 126 0 0 chr10 12577592 12577735 -133011553 - AluSg SINE Alu -167 143 1 235 223 91 66 chr10 12578233 12578354 -133010934 - L1ME4a LINE L1 -1276 4870 4747 1861 148 13 33 chr10 12578414 12578717 -133010571 - AluSx SINE Alu -15 297 1 2101 97 43 0 chr10 12578737 12579016 -133010272 - AluSc SINE Alu -18 291 1 2319 111 7 0 chr10 12579335 12579641 -133009647 - AluSg SINE Alu -2 308 1 1250 183 85 100 chr10 12580047 12580175 -133009113 - Looper DNA T2_type -178 1380 1252 2303 111 0 3 chr10 12580175 12580481 -133008807 - AluSx SINE Alu -7 305 1 1250 183 85 100 chr10 12580481 12580800 -133008488 - Looper DNA T2_type -306 1252 940 1910 75 95 0 chr10 12581119 12581372 -133007916 - AluY SINE Alu -13 298 22 342 0 0 0 chr10 12581613 12581651 -133007637 + (CA)n Simple_repeat Simple_repeat 2 39 0 23 33 0 0 chr10 12581923 12581953 -133007335 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr10 12582208 12582236 -133007052 + AT_rich Low_complexity Low_complexity 1 28 0 291 71 0 0 chr10 12582402 12582444 -133006844 + (TTTTA)n Simple_repeat Simple_repeat 2 43 0 1388 144 52 19 chr10 12582446 12582717 -133006571 - AluY SINE Alu -31 280 1 714 173 8 15 chr10 12582719 12582852 -133006436 - AluJo/FLAM SINE Alu -169 133 2 21 0 0 0 chr10 12583084 12583105 -133006183 + AT_rich Low_complexity Low_complexity 1 21 0 530 305 108 41 chr10 12583425 12584057 -133005231 - L2 LINE L2 -213 3059 2374 591 250 54 0 chr10 12584146 12584294 -133004994 - L1ME2 LINE L1 -3 6161 6006 372 188 0 0 chr10 12584295 12584364 -133004924 - L1ME2 LINE L1 -209 5955 5887 2717 171 52 15 chr10 12584372 12584756 -133004532 - MER21B LTR ERV1 -1 862 453 2228 125 0 0 chr10 12584756 12585061 -133004227 + AluSx SINE Alu 3 307 -5 2717 171 52 15 chr10 12585061 12585198 -133004090 - MER21B LTR ERV1 -410 453 322 234 156 0 0 chr10 12585338 12585383 -133003905 + L2 LINE L2 3269 3313 0 497 264 32 7 chr10 12585446 12585601 -133003687 + MER117 DNA MER1_type 1 159 -38 1933 145 7 3 chr10 12585835 12586132 -133003156 + AluJo SINE Alu 3 300 -12 251 118 0 0 chr10 12586352 12586386 -133002902 + Tigger4(Zombi) DNA MER2_type 4 37 -2694 * 910 98 286 98 chr10 12586384 12586509 -133002779 + Tigger4(Zombi) DNA MER2_type 2452 2552 -179 3893 89 47 15 chr10 12586509 12586731 -133002557 - L1MA1 LINE L1 0 6302 6089 2293 112 0 3 chr10 12586731 12587036 -133002252 + AluSx SINE Alu 1 304 -8 3893 89 47 15 chr10 12587036 12587408 -133001880 - L1MA1 LINE L1 -213 6089 5689 910 98 286 98 chr10 12587408 12587516 -133001772 + Tigger4(Zombi) DNA MER2_type 2552 2729 -2 461 119 525 0 chr10 12587751 12587852 -133001436 - AluSc SINE Alu -154 155 2 271 175 18 35 chr10 12587970 12588027 -133001261 - LTR67 LTR ERVL -3 554 499 2399 98 0 0 chr10 12588200 12588496 -133000792 + AluSq SINE Alu 1 296 -17 1623 175 0 11 chr10 12588509 12588777 -133000511 - AluJo SINE Alu -45 267 3 2573 65 0 0 chr10 12589146 12589453 -132999835 - AluY SINE Alu -4 307 1 207 100 0 0 chr10 12589461 12589491 -132999797 + (T)n Simple_repeat Simple_repeat 1 30 0 804 101 18 0 chr10 12589531 12589640 -132999648 - FLAM_C SINE Alu -32 111 1 337 245 22 136 chr10 12589640 12589743 -132999545 + MER5B DNA MER1_type 15 128 -50 2141 112 0 32 chr10 12589743 12590056 -132999232 - AluSq SINE Alu 0 313 11 337 245 22 136 chr10 12590056 12590071 -132999217 + MER5B DNA MER1_type 128 143 -35 2278 115 0 3 chr10 12590071 12590384 -132998904 - AluSp SINE Alu -1 312 1 337 245 22 136 chr10 12590384 12590448 -132998840 + MER5B DNA MER1_type 143 177 -1 1868 157 15 68 chr10 12590773 12591167 -132998121 + MLT1B LTR MaLR 18 390 0 2114 136 3 3 chr10 12591419 12591728 -132997560 - AluSx SINE Alu -3 309 1 388 191 15 0 chr10 12591952 12592020 -132997268 + MLT1E LTR MaLR 55 123 -470 576 89 0 0 chr10 12592040 12592119 -132997169 - AluJ/FLAM SINE Alu -232 80 2 926 153 0 20 chr10 12592222 12592372 -132996916 - AluSg/x SINE Alu -8 304 158 328 234 154 53 chr10 12592796 12592984 -132996304 - L1M4 LINE L1 -748 5398 5192 2479 88 0 0 chr10 12593237 12593545 -132995743 + AluSc SINE Alu 1 308 -1 3870 90 41 0 chr10 12594062 12594594 -132994694 + MER41A LTR ERV1 1 554 0 1309 91 0 0 chr10 12594683 12594858 -132994430 - AluSg/x SINE Alu 0 312 138 2451 74 3 0 chr10 12595432 12595731 -132993557 + AluSq SINE Alu 1 300 -13 1632 145 17 3 chr10 12595734 12596023 -132993265 + L1PA16 LINE L1 5865 6157 -9 23 33 0 0 chr10 12596200 12596230 -132993058 + AT_rich Low_complexity Low_complexity 1 30 0 1977 159 3 0 chr10 12596242 12596538 -132992750 + AluSx SINE Alu 4 300 -12 2595 51 0 0 chr10 12597410 12597704 -132991584 + AluY SINE Alu 2 295 -16 236 197 14 28 chr10 12597738 12597809 -132991479 + (TATAA)n Simple_repeat Simple_repeat 1 70 0 750 309 87 40 chr10 12597897 12598298 -132990990 - MLT1L LTR MaLR -48 567 148 645 124 58 33 chr10 12598298 12598419 -132990869 - MER30B DNA MER1_type 0 230 107 40 21 0 0 chr10 12598425 12598472 -132990816 + AT_rich Low_complexity Low_complexity 1 47 0 809 94 15 9 chr10 12598472 12598624 -132990664 - MER30B DNA MER1_type -75 155 1 531 256 67 0 chr10 12598634 12598798 -132990490 - MER5A DNA MER1_type -4 185 11 1183 38 0 0 chr10 12599051 12599182 -132990106 + AluSg SINE Alu 1 131 -179 568 147 0 42 chr10 12599465 12599560 -132989728 - AluSg/x SINE Alu -14 295 205 2462 64 0 10 chr10 12599609 12599907 -132989381 - AluY SINE Alu -16 295 1 2293 120 0 0 chr10 12599991 12600299 -132988989 - AluSx SINE Alu -4 308 1 2468 87 6 0 chr10 12600582 12600915 -132988373 - L1PB1 LINE L1 0 6151 5817 200 108 0 27 chr10 12600990 12601027 -132988261 + (TTTTC)n Simple_repeat Simple_repeat 5 40 0 207 0 0 0 chr10 12601498 12601521 -132987767 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 2295 108 3 16 chr10 12601826 12602141 -132987147 + AluSx SINE Alu 1 311 -1 4391 98 62 7 chr10 12602470 12603083 -132986205 - SVA Other Other 0 1386 740 1986 147 0 16 chr10 12603329 12603635 -132985653 + AluJb SINE Alu 1 301 -11 1911 117 78 0 chr10 12603856 12604139 -132985149 - AluSx SINE Alu -7 305 1 282 56 0 0 chr10 12604221 12604257 -132985031 + (A)n Simple_repeat Simple_repeat 1 36 0 2309 91 14 0 chr10 12605083 12605379 -132983909 - AluY SINE Alu -11 300 1 1909 141 35 0 chr10 12605479 12605769 -132983519 - AluSq SINE Alu -13 300 1 2264 109 0 0 chr10 12605933 12606226 -132983062 - AluSx SINE Alu -19 293 1 184 246 0 35 chr10 12606363 12606420 -132982868 - L2 LINE L2 -35 3237 3183 265 280 56 19 chr10 12606854 12606961 -132982327 + L1MEd LINE L1 96 206 -5913 944 277 106 28 chr10 12607636 12608033 -132981255 + L1MC4 LINE L1 5313 5740 -2068 1387 131 36 18 chr10 12608061 12608283 -132981005 - AluJb SINE Alu -75 237 12 2667 40 0 0 chr10 12608859 12609159 -132980129 - AluY SINE Alu -11 300 1 2108 102 24 14 chr10 12609161 12609455 -132979833 - AluSp SINE Alu -16 297 1 1644 168 0 38 chr10 12609731 12609879 -132979409 - AluJb SINE Alu -30 282 149 1640 123 119 15 chr10 12609879 12610148 -132979140 - AluSg SINE Alu -13 297 1 1644 168 0 38 chr10 12610148 12610290 -132978998 - AluJb SINE Alu -163 149 3 1634 96 9 14 chr10 12610844 12611062 -132978226 - AluSq SINE Alu -96 217 1 1041 137 0 0 chr10 12611492 12611638 -132977650 + AluSq/x SINE Alu 1 146 -167 2345 93 0 3 chr10 12611639 12611940 -132977348 + AluY SINE Alu 1 300 -11 1358 278 143 36 chr10 12611978 12612911 -132976377 - HAL1 LINE L1 -1124 1383 352 3026 136 2 2 chr10 12613343 12613791 -132975497 - MER83 LTR ERV1 0 448 1 1749 192 7 0 chr10 12614195 12614497 -132974791 - AluJo SINE Alu -8 304 1 1760 181 3 13 chr10 12614517 12614826 -132974462 - AluJb SINE Alu -6 306 1 2081 116 0 3 chr10 12615673 12615965 -132973323 - AluSx SINE Alu -21 291 1 1295 205 137 36 chr10 12616749 12616790 -132972498 + L1MC4 LINE L1 6584 6619 -1423 1831 114 84 4 chr10 12616790 12617076 -132972212 + AluSx SINE Alu 1 307 0 1295 205 137 36 chr10 12617076 12617419 -132971869 + L1MC4 LINE L1 6619 7008 -1034 1531 138 120 57 chr10 12617420 12617477 -132971811 + MER46B DNA MER2_type 2 54 -2677 585 236 0 16 chr10 12617477 12617600 -132971688 - FLAM_A SINE Alu -12 121 1 1531 138 120 57 chr10 12617600 12617875 -132971413 + MER46B DNA MER2_type 54 230 -6 2503 228 90 38 chr10 12617885 12618621 -132970667 + L1MC4 LINE L1 7012 7785 -257 1419 192 78 39 chr10 12618621 12619007 -132970281 - LTR37A LTR ERV1 -8 418 18 182 174 22 0 chr10 12621411 12621457 -132967831 + T-rich Low_complexity Low_complexity 1 47 0 304 213 52 81 chr10 12621473 12621609 -132967679 - HAL1 LINE L1 -20 2487 2356 2309 82 0 13 chr10 12622768 12623073 -132966215 + AluSx SINE Alu 1 301 -11 9837 57 7 109 chr10 12623581 12625096 -132964192 - SVA Other Other 0 1386 26 231 36 0 0 chr10 12625101 12625129 -132964159 + (AGGGGG)n Simple_repeat Simple_repeat 2 29 0 2288 127 0 0 chr10 12625313 12625620 -132963668 - AluSg SINE Alu -3 307 1 21 36 0 0 chr10 12625729 12625757 -132963531 + AT_rich Low_complexity Low_complexity 1 28 0 1687 176 32 0 chr10 12625780 12626058 -132963230 - AluJo SINE Alu -25 287 1 27 0 0 0 chr10 12626092 12626119 -132963169 + AT_rich Low_complexity Low_complexity 1 27 0 2046 134 0 47 chr10 12626224 12626399 -132962889 - AluSx SINE Alu -6 306 151 2411 88 3 0 chr10 12626399 12626694 -132962594 - AluSp SINE Alu -17 296 1 2046 134 0 47 chr10 12626694 12626839 -132962449 - AluSx SINE Alu -161 151 1 263 237 101 93 chr10 12627461 12627600 -132961688 + L2 LINE L2 3169 3308 -5 201 314 58 22 chr10 12627579 12627716 -132961572 + L3 LINE CR1 1175 1316 -261 * 1257 110 12 110 chr10 12627949 12628006 -132961282 - L1MA2 LINE L1 0 6304 6243 2198 114 0 10 chr10 12628006 12628313 -132960975 - AluSx SINE Alu -4 308 5 1257 110 12 110 chr10 12628313 12628510 -132960778 - L1MA2 LINE L1 -61 6243 6075 266 286 33 11 chr10 12628547 12628638 -132960650 + MIR SINE MIR 163 255 -7 1915 172 0 0 chr10 12629851 12630147 -132959141 + AluJo SINE Alu 1 296 -16 1976 112 22 14 chr10 12630147 12630459 -132958829 + AluSg SINE Alu 1 314 0 220 293 81 64 chr10 12632270 12632553 -132956735 + L2 LINE L2 1522 1809 -1505 1961 68 8 16 chr10 12632573 12632822 -132956466 + AluY SINE Alu 47 293 -18 2383 78 0 14 chr10 12633034 12633330 -132955958 + AluSx SINE Alu 1 292 -20 2331 99 3 0 chr10 12633332 12633625 -132955663 + AluSp SINE Alu 1 294 -19 1798 91 4 9 chr10 12633636 12633867 -132955421 + AluSx SINE Alu 1 230 -82 2136 116 10 10 chr10 12634262 12634573 -132954715 - AluSx SINE Alu -1 311 1 1245 149 26 5 chr10 12634575 12634769 -132954519 - AluJb SINE Alu -21 291 94 211 305 0 0 chr10 12634816 12634875 -132954413 - MIR SINE MIR -13 249 191 790 166 0 43 chr10 12635000 12635139 -132954149 - FLAM_C SINE Alu 0 133 1 2051 139 3 0 chr10 12635162 12635464 -132953824 - AluSp SINE Alu -10 303 1 2260 100 3 0 chr10 12635614 12635914 -132953374 + AluSx SINE Alu 1 301 -11 2125 121 3 47 chr10 12636507 12636829 -132952459 - AluSg SINE Alu 0 310 3 180 0 0 0 chr10 12636838 12636858 -132952430 + (T)n Simple_repeat Simple_repeat 1 20 0 2323 85 7 3 chr10 12637209 12637502 -132951786 - AluSc SINE Alu -15 294 1 342 201 262 17 chr10 12637593 12637732 -132951556 + MIR SINE MIR 2 165 -43 919 162 0 0 chr10 12637848 12637990 -132951298 + FLAM_C SINE Alu 1 142 -1 31 44 0 0 chr10 12637990 12638035 -132951253 + AT_rich Low_complexity Low_complexity 1 45 0 1929 122 37 0 chr10 12638043 12638314 -132950974 + AluSx SINE Alu 18 298 -14 2206 120 0 3 chr10 12638316 12638608 -132950680 + AluSg SINE Alu 2 292 -18 5734 79 59 29 chr10 12638733 12639535 -132949753 + LTR12 LTR ERV1 1 826 0 727 256 49 25 chr10 12640001 12640204 -132949084 + MIR SINE MIR 42 249 -13 1613 195 48 0 chr10 12640210 12640502 -132948786 - AluJo SINE Alu -6 306 1 202 269 124 69 chr10 12640659 12640804 -132948484 - MIR SINE MIR -12 250 98 1543 166 0 91 chr10 12640912 12641219 -132948069 + AluJo SINE Alu 32 310 -2 2371 92 3 3 chr10 12641322 12641627 -132947661 - AluSc SINE Alu -4 305 1 284 109 0 22 chr10 12641973 12642019 -132947269 + Alu SINE Alu 1 45 -256 2336 102 0 3 chr10 12642166 12642471 -132946817 - AluSx SINE Alu -8 304 1 2306 93 0 0 chr10 12642483 12642772 -132946516 - AluSc SINE Alu -20 289 1 2003 117 0 8 chr10 12643304 12643570 -132945718 - AluSx SINE Alu -46 266 3 956 140 86 91 chr10 12643579 12643800 -132945488 - AluJo SINE Alu 0 312 93 1967 142 20 0 chr10 12643967 12644262 -132945026 - AluSx SINE Alu -11 301 1 665 188 0 55 chr10 12644276 12644442 -132944846 + FLAM_A SINE Alu 1 159 0 1235 228 58 41 chr10 12644513 12644866 -132944422 - L1ME LINE L1 -393 5771 5409 2282 114 0 3 chr10 12644866 12645165 -132944123 - AluSg SINE Alu -12 298 1 1235 228 58 41 chr10 12645165 12645224 -132944064 - L1ME LINE L1 -755 5409 5352 363 315 36 15 chr10 12645252 12645406 -132943882 - MIR SINE MIR -61 147 30 5067 111 18 45 chr10 12645634 12646079 -132943209 - L1PB1 LINE L1 0 6151 5695 2122 141 0 3 chr10 12646079 12646377 -132942911 - AluSx SINE Alu -15 297 1 5067 111 18 45 chr10 12646377 12646762 -132942526 - L1PB1 LINE L1 -456 5695 5301 10923 31 3 0 chr10 12646762 12648811 -132940477 - L1PA4 LINE L1 0 6155 4097 2384 68 0 35 chr10 12648814 12649125 -132940163 - AluY SINE Alu -9 302 3 5067 111 18 45 chr10 12649125 12649287 -132940001 - L1PB1 LINE L1 -852 5299 5236 2025 129 3 39 chr10 12649290 12649600 -132939688 - AluY SINE Alu -12 299 1 2286 86 0 63 chr10 12650131 12650446 -132938842 + AluSp SINE Alu 1 295 -18 2375 69 14 3 chr10 12650828 12651119 -132938169 + AluY SINE Alu 1 294 -17 2233 63 13 53 chr10 12651447 12651749 -132937539 + AluSg1 SINE Alu 1 290 -19 2317 94 7 0 chr10 12652125 12652411 -132936877 + AluSg SINE Alu 13 300 -10 2014 152 0 3 chr10 12652625 12652922 -132936366 + AluJb SINE Alu 1 296 -16 283 211 86 69 chr10 12653116 12653291 -132935997 - L1ME4a LINE L1 -50 6071 5894 2299 111 7 0 chr10 12653323 12653630 -132935658 - AluSg SINE Alu -1 309 1 2392 95 3 0 chr10 12653630 12653933 -132935355 - AluSp SINE Alu -8 305 1 2507 71 0 0 chr10 12653964 12654259 -132935029 - AluY SINE Alu -16 295 1 1260 89 6 0 chr10 12654889 12655047 -132934241 + AluSq SINE Alu 1 159 -154 2177 141 0 0 chr10 12655185 12655484 -132933804 - AluSx SINE Alu -13 299 1 1281 129 14 29 chr10 12655620 12655829 -132933459 + AluJo SINE Alu 87 292 -20 2221 97 21 0 chr10 12656059 12656348 -132932940 - AluSx SINE Alu -17 295 1 329 231 88 0 chr10 12656384 12656475 -132932813 - MER63 DNA MER1_type -86 750 26 1475 192 118 51 chr10 12656485 12656761 -132932527 - LOR1b LTR ERV1 0 461 205 2391 78 0 0 chr10 12656761 12657054 -132932234 - AluSc SINE Alu -16 293 1 2217 112 10 0 chr10 12657061 12657364 -132931924 - AluY SINE Alu -4 307 2 1475 192 118 51 chr10 12657364 12657511 -132931777 - LOR1b LTR ERV1 -261 200 1 1884 154 26 10 chr10 12657778 12658084 -132931204 + AluSx SINE Alu 1 311 -1 2120 142 0 19 chr10 12658655 12658971 -132930317 + AluSx SINE Alu 1 310 -2 799 158 0 50 chr10 12659005 12659144 -132930144 - FLAM_C SINE Alu -1 132 1 406 192 159 110 chr10 12659161 12659283 -132930005 + L1ME4a LINE L1 5635 5750 -371 1562 190 10 20 chr10 12659283 12659588 -132929700 + AluJo SINE Alu 1 302 -10 351 0 0 0 chr10 12659596 12659635 -132929653 + (CA)n Simple_repeat Simple_repeat 2 40 0 406 192 159 110 chr10 12659635 12659685 -132929603 + L1ME4a LINE L1 5756 5825 -296 2283 120 10 0 chr10 12659691 12660000 -132929288 + AluSx SINE Alu 1 312 0 471 214 5 176 chr10 12660185 12660266 -132929022 - MER45A DNA AcHobo -1405 176 151 1443 184 69 25 chr10 12660266 12660543 -132928745 + AluJo SINE Alu 1 289 -23 471 214 5 176 chr10 12660543 12660671 -132928617 - MER45A DNA AcHobo -1430 151 3 687 137 0 0 chr10 12661682 12661784 -132927504 - AluSx SINE Alu -20 290 189 904 147 15 0 chr10 12661786 12661922 -132927366 - AluSx SINE Alu -175 138 1 2752 27 0 0 chr10 12662093 12662393 -132926895 + AluY SINE Alu 1 300 -11 2113 110 27 3 chr10 12662641 12662933 -132926355 - AluSx SINE Alu -13 299 1 1662 166 14 20 chr10 12663262 12663557 -132925731 - AluJo SINE Alu -5 307 15 2259 92 0 32 chr10 12663835 12664150 -132925138 + AluY SINE Alu 1 305 -6 2000 114 52 0 chr10 12664160 12664449 -132924839 + AluSx SINE Alu 1 304 -8 2006 152 3 3 chr10 12665086 12665383 -132923905 - AluJo SINE Alu -15 297 1 325 263 60 88 chr10 12665459 12665676 -132923612 + MIR SINE MIR 52 262 0 2153 130 35 46 chr10 12665678 12665972 -132923316 + THE1B LTR MaLR 1 292 -72 2298 98 0 13 chr10 12665972 12666277 -132923011 - AluSc SINE Alu -8 301 1 2153 130 35 46 chr10 12666277 12666350 -132922938 + THE1B LTR MaLR 292 364 0 2045 152 0 7 chr10 12666464 12666761 -132922527 + AluSx SINE Alu 1 295 -17 403 129 0 0 chr10 12667204 12667274 -132922014 - AluSp/q SINE Alu -9 304 235 2147 113 0 13 chr10 12667543 12667852 -132921436 + AluSp SINE Alu 1 305 -8 1299 114 0 22 chr10 12667853 12668037 -132921251 + AluSg/x SINE Alu 131 310 0 1007 191 6 0 chr10 12668131 12668309 -132920979 - AluJb SINE Alu 0 312 134 1850 166 7 7 chr10 12668310 12668611 -132920677 - AluSx SINE Alu -11 301 1 1948 156 0 0 chr10 12668617 12668899 -132920389 - AluSq SINE Alu -31 282 1 2381 95 3 3 chr10 12669070 12669374 -132919914 - AluSx SINE Alu 0 312 9 1484 177 0 0 chr10 12669375 12669601 -132919687 - AluJb SINE Alu -73 239 14 23 0 0 0 chr10 12669616 12669639 -132919649 + AT_rich Low_complexity Low_complexity 1 23 0 2164 110 10 0 chr10 12669924 12670224 -132919064 - AluSq SINE Alu -10 303 1 1105 68 0 0 chr10 12670225 12670358 -132918930 - AluY SINE Alu -178 133 1 2133 138 0 0 chr10 12670358 12670655 -132918633 - AluSx SINE Alu -15 297 1 180 97 0 0 chr10 12670655 12670686 -132918602 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 1683 136 0 0 chr10 12670686 12670928 -132918360 - AluSx SINE Alu -29 283 42 827 141 67 0 chr10 12670929 12671078 -132918210 + MER2 DNA MER2_type 122 280 -65 2225 115 7 0 chr10 12671080 12671375 -132917913 - AluSx SINE Alu -9 303 7 323 385 0 0 chr10 12671927 12672036 -132917252 - L2 LINE L2 0 3313 3205 838 188 0 0 chr10 12672195 12672339 -132916949 - AluSg/x SINE Alu -10 302 159 634 228 0 0 chr10 12672471 12672594 -132916694 + FLAM_A SINE Alu 5 127 -6 187 167 21 42 chr10 12672615 12672663 -132916625 + L2 LINE L2 3041 3087 -226 2368 105 0 10 chr10 12672895 12673208 -132916080 + AluSx SINE Alu 3 312 0 2325 73 0 38 chr10 12673577 12673890 -132915398 + AluY SINE Alu 1 301 -10 2341 114 0 0 chr10 12673892 12674200 -132915088 + AluSx SINE Alu 1 308 -4 1941 133 12 62 chr10 12675298 12675622 -132913666 - AluJb SINE Alu -4 308 1 1254 184 92 26 chr10 12676317 12676589 -132912699 - AluSg SINE Alu -10 290 1 1254 128 0 20 chr10 12676931 12677126 -132912162 - AluSx SINE Alu -121 191 1 1802 143 0 23 chr10 12679751 12680059 -132909229 + AluSx SINE Alu 1 301 -11 817 175 0 7 chr10 12680258 12680401 -132908887 - L1PA15 LINE L1 0 6165 6024 1190 178 0 0 chr10 12680408 12680621 -132908667 - AluSg/x SINE Alu -15 297 85 300 135 54 68 chr10 12680748 12680822 -132908466 + L1MCa LINE L1 1992 2064 -4362 * 311 122 54 68 chr10 12680792 12680866 -132908422 + L1MCa LINE L1 1992 2064 -4362 28 0 0 0 chr10 12680866 12680894 -132908394 + AT_rich Low_complexity Low_complexity 1 28 0 473 269 70 75 chr10 12681002 12681333 -132907955 - L2 LINE L2 -24 3248 2920 1092 115 0 0 chr10 12681460 12681616 -132907672 - AluSx SINE Alu -32 278 123 951 114 0 0 chr10 12681655 12681787 -132907501 - AluSx SINE Alu -181 132 1 1497 161 8 0 chr10 12681791 12682039 -132907249 - AluJb SINE Alu -24 288 39 245 325 158 5 chr10 12682842 12683051 -132906237 + MIR SINE MIR 9 249 -13 27 0 0 0 chr10 12683259 12683286 -132906002 + AT_rich Low_complexity Low_complexity 1 27 0 210 167 0 0 chr10 12683528 12683564 -132905724 + A-rich Low_complexity Low_complexity 1 36 0 567 109 0 40 chr10 12683575 12683676 -132905612 - AluSp/q SINE Alu -2 311 215 353 194 30 0 chr10 12683778 12683845 -132905443 + Tigger5 DNA MER2_type 26 94 -2229 2034 129 0 6 chr10 12683845 12684156 -132905132 + AluY SINE Alu 1 309 -2 1967 206 55 122 chr10 12684204 12684573 -132904715 - L1ME1 LINE L1 -11 6155 5763 1925 137 6 10 chr10 12684573 12684886 -132904402 - AluSx SINE Alu 0 312 1 1967 206 55 122 chr10 12684886 12684900 -132904388 - L1ME1 LINE L1 -403 5763 5750 659 188 0 53 chr10 12684900 12685075 -132904213 + FLAM_A SINE Alu 1 168 0 1967 206 55 122 chr10 12685075 12685499 -132903789 - L1ME1 LINE L1 -416 5750 5398 2052 125 0 3 chr10 12685499 12685796 -132903492 - AluSx SINE Alu -12 300 5 1488 183 18 7 chr10 12685807 12686086 -132903202 + Tigger3(Golem) DNA MER2_type 2747 3028 -1 671 233 10 68 chr10 12686089 12686295 -132902993 - MIR SINE MIR -56 206 13 361 157 14 0 chr10 12686443 12686513 -132902775 - AluS SINE Alu -229 71 1 752 253 66 72 chr10 12686513 12687050 -132902238 - L1MEd LINE L1 -4823 1306 773 1973 142 3 0 chr10 12687098 12687407 -132901881 - AluSx SINE Alu -2 310 1 1883 126 28 0 chr10 12687761 12688047 -132901241 - AluSg SINE Alu -16 294 1 1274 189 8 12 chr10 12688913 12689172 -132900116 - L1MB3 LINE L1 -15 6168 5911 754 180 0 29 chr10 12689178 12689317 -132899971 + MER2 DNA MER2_type 1 135 -210 2276 68 0 40 chr10 12689317 12689641 -132899647 - AluY SINE Alu 0 311 1 3051 121 20 82 chr10 12689661 12690223 -132899065 + MER1A DNA MER1_type 1 527 0 1962 130 0 13 chr10 12690878 12691178 -132898110 - AluSx SINE Alu -16 296 1 346 93 0 0 chr10 12691488 12691531 -132897757 - AluJo SINE Alu -13 287 245 285 218 16 65 chr10 12691662 12691786 -132897502 + (CCCA)n Simple_repeat Simple_repeat 1 118 0 1376 187 11 26 chr10 12691948 12692221 -132897067 - AluJo SINE Alu -43 269 1 1972 114 13 35 chr10 12692221 12692538 -132896750 - AluSq SINE Alu -3 310 1 270 176 0 0 chr10 12692747 12692798 -132896490 + CT-rich Low_complexity Low_complexity 2 52 0 180 0 0 0 chr10 12692834 12692854 -132896434 + (T)n Simple_repeat Simple_repeat 1 20 0 1078 119 0 0 chr10 12693388 12693548 -132895740 - AluSc SINE Alu -18 291 132 1553 113 0 4 chr10 12693548 12693712 -132895576 - AluSc SINE Alu -11 298 134 2053 101 3 29 chr10 12693712 12694019 -132895269 - AluY SINE Alu -12 299 1 1553 113 0 4 chr10 12694019 12694085 -132895203 - AluSc SINE Alu -175 134 69 1480 176 43 0 chr10 12694218 12694497 -132894791 - L1MA8 LINE L1 -37 6254 5964 741 186 43 6 chr10 12694501 12694592 -132894696 - Looper DNA T2_type -120 1438 1337 182 37 37 0 chr10 12694592 12694619 -132894669 + (CA)n Simple_repeat Simple_repeat 2 29 0 741 186 43 6 chr10 12694619 12694688 -132894600 - Looper DNA T2_type -221 1337 1272 2349 79 0 0 chr10 12694690 12694993 -132894295 - AluY SINE Alu -8 303 1 196 320 13 13 chr10 12695184 12695259 -132894029 - MIR SINE MIR -140 122 48 1719 235 95 77 chr10 12695523 12696290 -132892998 - MER21B LTR ERV1 -71 792 12 38 18 0 18 chr10 12696703 12696729 -132892559 + AT_rich Low_complexity Low_complexity 1 26 -29 1018 127 51 19 chr10 12696729 12696887 -132892401 - FRAM SINE Alu 0 166 4 38 18 0 18 chr10 12696887 12696916 -132892372 + AT_rich Low_complexity Low_complexity 26 55 0 1190 214 71 0 chr10 12696935 12697187 -132892101 - MER21B LTR ERV1 -593 270 1 709 131 0 9 chr10 12697296 12697403 -132891885 + AluSq/x SINE Alu 2 107 -206 2229 109 0 6 chr10 12697775 12698088 -132891200 + AluSx SINE Alu 1 311 -1 477 253 81 93 chr10 12698231 12698311 -132890977 - MER102b DNA MER1_type -1088 340 261 480 274 79 0 chr10 12698311 12698475 -132890813 + MER69A DNA AcHobo 1 177 0 477 253 81 93 chr10 12698475 12698642 -132890646 - MER102b DNA MER1_type -1167 261 96 2125 120 3 0 chr10 12698642 12698941 -132890347 + AluSx SINE Alu 1 300 -12 477 253 81 93 chr10 12698941 12699036 -132890252 - MER102b DNA MER1_type -1332 96 1 2240 76 21 0 chr10 12699904 12700194 -132889094 - AluSx SINE Alu -16 296 1 326 281 70 83 chr10 12701472 12701700 -132887588 + L2 LINE L2 3047 3271 -1 481 222 44 37 chr10 12701775 12701910 -132887378 + Charlie8 DNA MER1_type 37 172 -2245 2032 211 135 40 chr10 12701959 12702370 -132886918 - Charlie2 DNA MER1_type -16 2846 2475 2224 100 0 0 chr10 12702370 12702671 -132886617 - AluSq SINE Alu -12 301 1 2032 211 135 40 chr10 12702671 12703017 -132886271 - Charlie2 DNA MER1_type -387 2475 2017 349 86 86 0 chr10 12703271 12703399 -132885889 + (TA)n Simple_repeat Simple_repeat 2 140 0 2165 87 7 10 chr10 12703518 12703817 -132885471 - AluSq SINE Alu -15 298 1 22 0 0 0 chr10 12703843 12703865 -132885423 + AT_rich Low_complexity Low_complexity 1 22 0 534 265 132 37 chr10 12703904 12704229 -132885059 - L1ME4a LINE L1 0 6121 5766 1551 162 9 58 chr10 12704252 12704580 -132884708 - AluJo SINE Alu 0 312 1 4305 185 82 21 chr10 12704631 12704691 -132884597 - L1MB8 LINE L1 0 6178 6123 2183 108 3 0 chr10 12704691 12704997 -132884291 + AluSq SINE Alu 1 307 -6 4305 185 82 21 chr10 12704997 12706719 -132882569 - L1MB8 LINE L1 -55 6123 4302 1583 111 13 0 chr10 12706848 12707083 -132882205 - L1PA15 LINE L1 -269 5896 5659 249 267 163 12 chr10 12707094 12707180 -132882108 - MIR SINE MIR -67 141 43 597 163 0 122 chr10 12707288 12707435 -132881853 + MLT2B1 LTR ERVL 131 259 -261 1407 124 0 0 chr10 12707435 12707637 -132881651 + AluSx SINE Alu 64 265 -47 5661 77 60 30 chr10 12709377 12710179 -132879109 - LTR12 LTR ERV1 0 826 1 2060 120 0 3 chr10 12710304 12710596 -132878692 - AluSg SINE Alu -18 292 2 1819 118 37 0 chr10 12710598 12710869 -132878419 - AluSx SINE Alu -14 298 18 31 44 0 0 chr10 12710877 12710922 -132878366 + AT_rich Low_complexity Low_complexity 1 45 0 845 162 0 0 chr10 12710922 12711064 -132878224 - FLAM_C SINE Alu -1 142 1 334 201 262 17 chr10 12711180 12711319 -132877969 - MIR SINE MIR -43 165 2 2322 85 0 7 chr10 12711410 12711717 -132877571 + AluSg SINE Alu 1 305 -5 815 110 0 24 chr10 12711719 12711846 -132877442 - AluJo/FLAM SINE Alu -188 124 1 1677 126 11 4 chr10 12712422 12712685 -132876603 - AluSx SINE Alu -47 265 1 2141 79 7 0 chr10 12712691 12712981 -132876307 - AluY SINE Alu -19 292 1 212 163 0 0 chr10 12713066 12713109 -132876179 + A-rich Low_complexity Low_complexity 1 43 0 2092 113 0 3 chr10 12713289 12713582 -132875706 - AluSx SINE Alu -20 292 1 280 162 27 81 chr10 12713635 12713709 -132875579 - L1ME LINE L1 -394 5776 5707 1668 168 10 7 chr10 12714156 12714453 -132874835 - AluJb SINE Alu -14 298 1 408 165 12 35 chr10 12714662 12714747 -132874541 - Tigger5 DNA MER2_type 0 2323 2241 820 134 84 0 chr10 12714763 12714905 -132874383 - AluSg/x SINE Alu -23 287 134 2030 98 0 0 chr10 12714908 12715183 -132874105 - AluSx SINE Alu 0 312 38 192 77 0 0 chr10 12715284 12715310 -132873978 + (GGGAGA)n Simple_repeat Simple_repeat 6 31 0 2799 262 90 73 chr10 12715310 12716532 -132872756 - L1MDb LINE L1 -2845 3235 2036 6875 58 11 14 chr10 12716532 12718079 -132871209 - SVA Other Other -799 1386 1 2799 262 90 73 chr10 12718079 12718177 -132871111 - L1MDb LINE L1 -4044 2036 1941 1512 89 42 5 chr10 12718177 12718421 -132870867 - AluY SINE Alu 0 311 60 401 51 17 17 chr10 12718421 12718480 -132870808 - AluYb8 SINE Alu -187 131 73 2799 262 90 73 chr10 12718480 12718641 -132870647 - L1MDb LINE L1 -4139 1941 1784 2303 75 0 0 chr10 12718641 12718934 -132870354 + AluY SINE Alu 1 293 -18 2799 262 90 73 chr10 12718934 12719977 -132869311 - L1MDb LINE L1 -4296 1784 656 1847 145 14 14 chr10 12719977 12720273 -132869015 - AluSx SINE Alu -16 296 1 2799 262 90 73 chr10 12720273 12720486 -132868802 - L1MDb LINE L1 -5424 656 448 275 316 15 30 chr10 12720556 12720689 -132868599 - L1MDb LINE L1 -5615 455 325 1809 125 82 0 chr10 12720851 12721132 -132868156 + AluJb SINE Alu 1 304 -8 662 174 9 0 chr10 12721142 12721257 -132868031 + FLAM_A SINE Alu 20 135 -7 2118 83 0 65 chr10 12721569 12721894 -132867394 - AluSx SINE Alu -6 306 3 771 271 72 0 chr10 12722224 12722460 -132866828 - MIR SINE MIR -6 256 4 276 286 98 30 chr10 12722772 12722905 -132866383 - MIR3 SINE MIR 0 208 67 190 162 54 0 chr10 12722907 12722944 -132866344 - MIR SINE MIR -69 139 101 1433 166 0 0 chr10 12722957 12723198 -132866090 - AluJo SINE Alu -4 308 68 311 149 0 0 chr10 12723199 12723246 -132866042 - AluJb SINE Alu -188 114 68 743 148 0 0 chr10 12723247 12723355 -132865933 - AluJo/FLAM SINE Alu -198 114 7 201 311 33 33 chr10 12723441 12723531 -132865757 - MIR SINE MIR -82 180 91 263 301 0 0 chr10 12723627 12723700 -132865588 + MER94 DNA DNA 8 80 -54 519 263 105 0 chr10 12724550 12724702 -132864586 + MIR3 SINE MIR 41 208 0 2132 110 3 3 chr10 12724998 12725298 -132863990 + AluSx SINE Alu 1 300 -12 22 56 0 0 chr10 12726355 12726391 -132862897 + AT_rich Low_complexity Low_complexity 1 36 0 2693 19 0 0 chr10 12726498 12726805 -132862483 - AluYa5 SINE Alu -4 307 1 275 184 0 0 chr10 12726772 12726821 -132862467 - AluSg/x SINE Alu -134 168 120 4424 89 47 7 chr10 12726835 12727455 -132861833 + L1MA2 LINE L1 5660 6304 0 508 293 14 48 chr10 12727966 12728174 -132861114 - MLT1J LTR MaLR -54 457 257 504 48 0 0 chr10 12728374 12728437 -132860851 + (TCTA)n Simple_repeat Simple_repeat 3 65 0 1136 96 0 0 chr10 12728457 12728603 -132860685 - AluSg/x SINE Alu -33 279 134 2254 97 3 0 chr10 12728603 12728892 -132860396 - AluSx SINE Alu -22 290 1 1184 233 110 14 chr10 12728893 12729258 -132860030 - MLT1J2 LTR MaLR -37 413 14 247 225 65 87 chr10 12730073 12730211 -132859077 - MIR SINE MIR -70 192 58 338 165 45 105 chr10 12730320 12730453 -132858835 - L1MC4 LINE L1 -9 8033 7811 2023 116 0 0 chr10 12730498 12730798 -132858490 - AluSx SINE Alu 0 306 7 226 261 0 0 chr10 12731205 12731251 -132858037 - L1MC/D LINE L1 -1987 5821 5776 2110 142 0 0 chr10 12731294 12731597 -132857691 - AluSx SINE Alu -9 303 1 234 250 0 0 chr10 12731638 12731690 -132857598 - L1MC/D LINE L1 -527 5594 5543 270 196 0 98 chr10 12731745 12731838 -132857450 - L1M3 LINE L1 -730 5441 5358 183 80 0 0 chr10 12733111 12733136 -132856152 + (A)n Simple_repeat Simple_repeat 1 25 0 671 111 11 0 chr10 12733201 12733291 -132855997 - AluJ/FLAM SINE Alu -220 92 2 348 209 0 0 chr10 12733312 12733379 -132855909 - L1MC/D LINE L1 -2032 5776 5710 1586 156 7 68 chr10 12734147 12734455 -132854833 - AluJo SINE Alu -23 289 1 2236 107 10 3 chr10 12735577 12735885 -132853403 - AluSg SINE Alu 0 310 1 387 0 0 0 chr10 12736068 12736111 -132853177 + (TTCC)n Simple_repeat Simple_repeat 3 45 0 1644 152 22 14 chr10 12736111 12736388 -132852900 - AluJb SINE Alu -21 291 13 2050 119 0 13 chr10 12736965 12737268 -132852020 - AluSx SINE Alu -13 299 1 2079 110 7 10 chr10 12737278 12737570 -132851718 - AluSx SINE Alu -21 291 1 1718 134 4 36 chr10 12739468 12739744 -132849544 + AluSx SINE Alu 43 309 -3 2329 87 0 0 chr10 12739787 12740085 -132849203 + AluSg SINE Alu 1 298 -12 3735 21 5 5 chr10 12740818 12741239 -132848049 + L1PA4 LINE L1 5735 6155 0 204 40 0 0 chr10 12741924 12741949 -132847339 + (TC)n Simple_repeat Simple_repeat 1 25 0 339 225 180 45 chr10 12742336 12742504 -132846784 + MIR SINE MIR 19 212 -50 2788 177 29 38 chr10 12742665 12742713 -132846575 - L1MB3 LINE L1 -3 6180 6133 2024 138 0 41 chr10 12742713 12743031 -132846257 - AluJb SINE Alu -7 305 1 2788 177 29 38 chr10 12743031 12743120 -132846168 - L1MB3 LINE L1 -50 6133 6045 2223 123 0 0 chr10 12743120 12743422 -132845866 - AluSx SINE Alu -10 302 1 2788 177 29 38 chr10 12743422 12743843 -132845445 - L1MB3 LINE L1 -138 6045 5626 261 57 0 0 chr10 12744514 12744549 -132844739 + (TGAA)n Simple_repeat Simple_repeat 1 35 0 275 326 28 14 chr10 12745497 12745638 -132843650 + L1MEd LINE L1 1114 1256 -4863 2119 117 3 0 chr10 12745988 12746279 -132843009 + AluSx SINE Alu 1 292 -20 498 57 0 0 chr10 12747728 12747798 -132841490 + (TG)n Simple_repeat Simple_repeat 2 71 0 21 0 0 0 chr10 12748035 12748056 -132841232 + AT_rich Low_complexity Low_complexity 1 21 0 788 183 0 0 chr10 12748955 12749075 -132840213 + FRAM SINE Alu 32 151 -25 1269 147 9 28 chr10 12749330 12749541 -132839747 + AluJo SINE Alu 87 293 -19 277 271 93 21 chr10 12749825 12749965 -132839323 + MER5B DNA MER1_type 29 178 0 234 218 90 13 chr10 12750326 12750404 -132838884 + MLT1J2 LTR MaLR 18 101 -349 386 287 39 16 chr10 12750594 12750723 -132838565 + MLT1I LTR MaLR 254 385 -24 885 159 0 0 chr10 12752590 12752722 -132836566 - FRAM SINE Alu -27 149 18 355 315 0 0 chr10 12754896 12755004 -132834284 + (TG)n Simple_repeat Simple_repeat 1 108 0 204 375 62 8 chr10 12755010 12755138 -132834150 + L2 LINE L2 3179 3313 0 205 255 319 0 chr10 12757255 12757349 -132831939 - L2 LINE L2 0 3272 3149 1874 163 3 49 chr10 12758155 12758481 -132830807 + AluJb SINE Alu 1 311 -1 1082 306 47 26 chr10 12759722 12760244 -132829044 + L2 LINE L2 2557 3087 -226 556 240 16 31 chr10 12760424 12760553 -132828735 - MER58A DNA MER1_type 0 128 2 254 294 74 61 chr10 12760555 12760718 -132828570 + L2 LINE L2 3141 3305 -8 214 287 54 62 chr10 12761592 12761721 -132827567 - MIR3 SINE MIR 0 208 81 719 224 161 24 chr10 12761995 12762200 -132827088 + MIR SINE MIR 8 240 -22 5163 132 10 1 chr10 12763579 12764373 -132824915 + L1PA10 LINE L1 5231 6035 -133 1658 192 13 0 chr10 12765219 12765527 -132823761 - AluJo SINE Alu 0 312 1 1978 192 86 8 chr10 12766697 12767092 -132822196 + MSTB LTR MaLR 1 426 0 1876 139 4 14 chr10 12767096 12767407 -132821881 - AluSx SINE Alu 0 312 5 196 318 45 0 chr10 12767619 12767685 -132821603 + L2 LINE L2 3245 3313 0 21 36 0 0 chr10 12768636 12768664 -132820624 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr10 12768695 12768717 -132820571 + AT_rich Low_complexity Low_complexity 1 22 0 1727 199 22 14 chr10 12768890 12769247 -132820041 - L1MC3 LINE L1 -21 7764 7405 2018 156 6 3 chr10 12770399 12770714 -132818574 - 7SLRNA srpRNA srpRNA -4 316 1 2346 133 41 36 chr10 12774008 12774370 -132814918 - THE1B LTR MaLR 0 364 1 1605 171 7 27 chr10 12776231 12776529 -132812759 + L1PA12 LINE L1 5861 6152 -16 647 160 0 0 chr10 12777472 12777566 -132811722 - FRAM SINE Alu -30 146 53 243 88 0 0 chr10 12778689 12778723 -132810565 + (TGAA)n Simple_repeat Simple_repeat 4 37 0 470 301 27 27 chr10 12779641 12779824 -132809464 + MIR SINE MIR 52 234 -28 22 80 0 0 chr10 12780099 12780149 -132809139 + AT_rich Low_complexity Low_complexity 1 50 0 246 62 0 0 chr10 12780737 12780769 -132808519 + (CA)n Simple_repeat Simple_repeat 1 32 0 313 294 40 16 chr10 12780778 12780904 -132808384 - L1MC4 LINE L1 -1339 6703 6575 250 206 43 11 chr10 12780904 12780996 -132808292 + (TA)n Simple_repeat Simple_repeat 1 95 0 2432 66 0 0 chr10 12781159 12781462 -132807826 - AluY SINE Alu -8 303 1 209 89 44 22 chr10 12782615 12782660 -132806628 + (TA)n Simple_repeat Simple_repeat 1 46 0 360 308 123 0 chr10 12782773 12782903 -132806385 + MIR SINE MIR 8 153 -109 2388 207 16 16 chr10 12782906 12783495 -132805793 + L1M4 LINE L1 4812 5399 -785 1958 105 8 0 chr10 12783495 12783761 -132805527 + AluSx SINE Alu 38 305 -7 2388 207 16 16 chr10 12783761 12783840 -132805448 + L1M4 LINE L1 5399 5476 -708 195 42 0 0 chr10 12784306 12784330 -132804958 + (T)n Simple_repeat Simple_repeat 1 24 0 23 54 0 0 chr10 12784823 12784860 -132804428 + AT_rich Low_complexity Low_complexity 1 37 0 330 284 25 62 chr10 12784949 12785111 -132804177 + MIR SINE MIR 82 237 -25 26 0 0 0 chr10 12785879 12785905 -132803383 + AT_rich Low_complexity Low_complexity 1 26 0 1718 201 0 10 chr10 12786225 12786538 -132802750 - AluJo SINE Alu -2 310 1 403 377 8 8 chr10 12786947 12787077 -132802211 - MER91A DNA MER1_type -66 130 1 1300 186 34 15 chr10 12787652 12787916 -132801372 + AluJb SINE Alu 34 302 -10 590 60 0 12 chr10 12787946 12788030 -132801258 + (GGAA)n Simple_repeat Simple_repeat 2 84 0 262 374 25 37 chr10 12788330 12788493 -132800795 - L2 LINE L2 -17 3255 3095 1979 128 0 10 chr10 12790966 12791299 -132797989 + AluSx SINE Alu 1 330 0 246 320 0 0 chr10 12791671 12791774 -132797514 + A-rich Low_complexity Low_complexity 1 103 0 5394 122 12 10 chr10 12792437 12793299 -132795989 + L1PA13 LINE L1 5301 6163 0 310 329 58 27 chr10 12793492 12793784 -132795504 + HAL1 LINE L1 63 363 -2144 484 225 183 6 chr10 12794007 12794176 -132795112 + HAL1 LINE L1 2309 2507 0 220 232 89 18 chr10 12794282 12794338 -132794950 - L2 LINE L2 -8 3305 3246 196 345 0 0 chr10 12796499 12796557 -132792731 + L2 LINE L2 3205 3262 -10 23 0 0 0 chr10 12799223 12799246 -132790042 + AT_rich Low_complexity Low_complexity 1 23 0 12612 152 64 11 chr10 12799331 12801627 -132787661 + Tigger1 DNA MER2_type 1 2417 -1 250 297 34 61 chr10 12802066 12802214 -132787074 - MIR SINE MIR -31 231 88 1032 121 0 46 chr10 12802529 12802703 -132786585 + AluSg/x SINE Alu 145 310 0 1460 157 33 74 chr10 12802713 12803012 -132786276 + AluJo SINE Alu 1 287 -25 191 61 30 0 chr10 12803015 12803048 -132786240 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 597 185 247 18 chr10 12803056 12803283 -132786005 + L1ME4a LINE L1 5841 6119 -2 201 255 0 20 chr10 12803571 12803622 -132785666 - MIR SINE MIR -57 205 156 1339 137 4 57 chr10 12803984 12804232 -132785056 + AluJo SINE Alu 76 310 -2 1230 213 92 5 chr10 12805195 12805717 -132783571 - L1MC/D LINE L1 -649 5517 4985 2541 46 9 9 chr10 12805718 12806045 -132783243 - L1PA5 LINE L1 -4 6150 5824 1950 73 1 2 chr10 12806047 12806318 -132782970 + L1PA5 LINE L1 5565 5800 -354 263 206 16 16 chr10 12806318 12806381 -132782907 + CT-rich Low_complexity Low_complexity 1 63 0 867 256 0 0 chr10 12806381 12806596 -132782692 - L1MC/D LINE L1 -1199 4947 4733 * 1059 307 47 25 chr10 12806594 12807109 -132782179 + L1MC2 LINE L1 108 633 -5763 394 233 73 7 chr10 12807100 12807250 -132782038 + L1MC2 LINE L1 3308 3467 -2748 * 1771 45 0 5 chr10 12807589 12807810 -132781478 + L1PA5 LINE L1 5694 5913 -241 28 107 0 0 chr10 12808306 12808418 -132780870 + AT_rich Low_complexity Low_complexity 1 112 0 28 0 0 0 chr10 12809401 12809429 -132779859 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr10 12809822 12809845 -132779443 + AT_rich Low_complexity Low_complexity 1 23 0 220 277 0 32 chr10 12809908 12810002 -132779286 + (TATATG)n Simple_repeat Simple_repeat 4 94 0 32 43 0 0 chr10 12810354 12810400 -132778888 + AT_rich Low_complexity Low_complexity 1 46 0 1983 224 29 91 chr10 12811597 12812487 -132776801 + L1MC2 LINE L1 3886 4720 -1495 4984 195 46 14 chr10 12812504 12813713 -132775575 + L1MC2 LINE L1 5152 6404 -9 219 88 0 0 chr10 12814421 12814455 -132774833 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 218 259 17 35 chr10 12815317 12815375 -132773913 + L3 LINE CR1 1519 1575 -2 2102 53 0 0 chr10 12816045 12816309 -132772979 + L1PA5 LINE L1 5891 6154 0 251 339 138 0 chr10 12816934 12817064 -132772224 - MIR SINE MIR -48 214 67 25 0 0 0 chr10 12819623 12819648 -132769640 + AT_rich Low_complexity Low_complexity 1 25 0 2286 100 7 0 chr10 12820608 12820917 -132768371 + AluSx SINE Alu 1 311 -1 376 304 10 0 chr10 12822157 12822259 -132767029 + MER69 DNA AcHobo 4 106 -1120 489 121 17 9 chr10 12822266 12822382 -132766906 + (TCTA)n Simple_repeat Simple_repeat 1 117 0 396 302 217 0 chr10 12822386 12822598 -132766690 + MER69 DNA AcHobo 133 390 -2136 1422 247 88 6 chr10 12822601 12823144 -132766144 + MER69 DNA AcHobo 1795 2382 -144 252 373 0 8 chr10 12823216 12823342 -132765946 - L3 LINE CR1 -264 1313 1189 1014 130 7 7 chr10 12823427 12823581 -132765707 - AluSg/x SINE Alu -32 280 127 325 45 0 0 chr10 12823681 12823725 -132765563 - L1P LINE L1 -1785 4361 4318 239 349 47 16 chr10 12823853 12823982 -132765306 + L2 LINE L2 3142 3274 -39 262 334 68 68 chr10 12824967 12825207 -132764081 - L3 LINE CR1 -737 840 598 649 199 80 11 chr10 12825207 12825383 -132763905 + MER5A DNA MER1_type 1 188 -1 262 334 68 68 chr10 12825383 12825585 -132763703 - L3 LINE CR1 -978 599 398 1217 229 123 13 chr10 12825829 12826204 -132763084 + MER63B DNA MER1_type 21 436 0 300 53 0 0 chr10 12826394 12826432 -132762856 + (TG)n Simple_repeat Simple_repeat 2 39 0 336 276 0 0 chr10 12827478 12827554 -132761734 + L2 LINE L2 3197 3272 0 237 333 111 11 chr10 12828063 12828153 -132761135 + MIR SINE MIR 43 141 -67 319 269 19 9 chr10 12828257 12828365 -132760923 + MER103 DNA DNA 47 155 -11 1536 160 51 24 chr10 12829556 12829849 -132759439 + AluJo SINE Alu 1 301 -11 225 276 26 40 chr10 12830229 12830305 -132758983 + MIR3 SINE MIR 83 157 -51 207 279 54 63 chr10 12830783 12830894 -132758394 - MIR SINE MIR -128 134 25 1224 156 49 0 chr10 12831800 12832025 -132757263 + MER46A DNA MER2_type 1 236 0 24 0 0 0 chr10 12832099 12832123 -132757165 + AT_rich Low_complexity Low_complexity 1 24 0 1873 156 0 0 chr10 12834533 12834850 -132754438 + AluSx SINE Alu 1 317 0 296 82 0 20 chr10 12835065 12835114 -132754174 + (CA)n Simple_repeat Simple_repeat 2 49 0 180 111 0 0 chr10 12835783 12835810 -132753478 + (CA)n Simple_repeat Simple_repeat 2 28 0 534 290 97 6 chr10 12837664 12837840 -132751448 + MIR SINE MIR 46 237 -25 224 322 67 0 chr10 12838052 12838142 -132751146 - L3 LINE CR1 -505 1072 977 203 327 0 0 chr10 12838417 12838469 -132750819 + (TG)n Simple_repeat Simple_repeat 2 53 0 365 351 50 50 chr10 12838623 12838882 -132750406 + L2 LINE L2 2990 3248 -24 1386 142 4 49 chr10 12839068 12839314 -132749974 - L1P4 LINE L1 -455 5711 5477 193 348 96 52 chr10 12839807 12840037 -132749251 - L3 LINE CR1 -160 1417 1178 339 281 90 12 chr10 12840977 12841144 -132748144 + L1M4 LINE L1 2439 2618 -3528 1785 190 57 49 chr10 12841281 12841686 -132747602 + L1PA13 LINE L1 1203 1610 -5177 1337 113 6 63 chr10 12841810 12842037 -132747251 + pTR5 LTR ERV1 172 410 -2028 2849 19 0 0 chr10 12842037 12842353 -132746935 + AluYb8 SINE Alu 1 316 -2 1337 113 6 63 chr10 12842353 12842407 -132746881 + pTR5 LTR ERV1 410 2331 -107 186 335 110 35 chr10 12843441 12843614 -132745674 + L3 LINE CR1 260 445 -1132 1173 227 33 3 chr10 12844366 12844670 -132744618 + MER33 DNA MER1_type 10 322 -2 21 36 0 0 chr10 12844792 12844820 -132744468 + AT_rich Low_complexity Low_complexity 1 28 0 1909 121 7 18 chr10 12844993 12845303 -132743985 + AluSx SINE Alu 3 309 0 189 303 117 35 chr10 12845501 12845646 -132743642 - L2 LINE L2 -215 3057 2901 26 0 0 0 chr10 12846154 12846180 -132743108 + AT_rich Low_complexity Low_complexity 1 26 0 451 152 65 11 chr10 12846435 12846527 -132742761 - MER61B-int LTR ERV1 -4714 503 407 851 148 107 31 chr10 12846538 12846734 -132742554 - MER61B-int LTR ERV1 -4763 454 244 1167 216 98 34 chr10 12847064 12847360 -132741928 - MER61B LTR ERV1 -28 396 1 1931 173 60 41 chr10 12848767 12849183 -132740105 - MER61C LTR ERV1 -10 424 1 276 330 121 12 chr10 12849187 12849360 -132739928 + MIR SINE MIR 31 222 -40 435 240 33 60 chr10 12849604 12849754 -132739534 + L2 LINE L2 3153 3298 -15 25 31 0 0 chr10 12849764 12849796 -132739492 + AT_rich Low_complexity Low_complexity 1 32 0 245 204 0 0 chr10 12849811 12849865 -132739423 + L1 LINE L1 2407 2460 -3686 28 29 0 0 chr10 12850087 12850122 -132739166 + AT_rich Low_complexity Low_complexity 1 35 0 1785 158 41 7 chr10 12851234 12851550 -132737738 - AluSx SINE Alu 0 312 1 1976 117 21 0 chr10 12852019 12852301 -132736987 + AluSg SINE Alu 13 300 -10 351 0 0 0 chr10 12852536 12852575 -132736713 + (CA)n Simple_repeat Simple_repeat 2 40 0 5479 50 1 6 chr10 12852612 12853293 -132735995 - L1PA5 LINE L1 -3 6151 5474 12921 116 26 9 chr10 12853299 12855323 -132733965 + MER61B-int LTR ERV1 3311 5217 0 898 199 39 5 chr10 12855323 12855538 -132733750 + MER61B LTR ERV1 1 315 -110 278 272 25 0 chr10 12855653 12855734 -132733554 + L1P LINE L1 3728 3810 -2336 1534 253 90 25 chr10 12855845 12857015 -132732273 - L1M4 LINE L1 -3595 2375 1130 2059 268 53 91 chr10 12857017 12857434 -132731854 - L1M4 LINE L1 -4811 1080 649 216 0 0 0 chr10 12857434 12857458 -132731830 + (TTG)n Simple_repeat Simple_repeat 1 24 0 2059 268 53 91 chr10 12857458 12858161 -132731127 - L1M4 LINE L1 -5242 649 3 2002 224 55 14 chr10 12858164 12858243 -132731045 + L1M4 LINE L1 4677 4751 -1433 4818 86 41 5 chr10 12858243 12858907 -132730381 - LTR12 LTR ERV1 0 688 1 2002 224 55 14 chr10 12858907 12859296 -132729992 + L1M4 LINE L1 4751 5191 -993 201 74 0 0 chr10 12859296 12859323 -132729965 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2002 224 55 14 chr10 12859323 12859618 -132729670 + L1M4 LINE L1 5191 5472 -712 6525 63 18 24 chr10 12859721 12860604 -132728684 + SVA Other Other 508 1385 -1 325 238 0 0 chr10 12860616 12860696 -132728592 + L1ME1 LINE L1 3289 3368 -2778 985 213 64 0 chr10 12860718 12860920 -132728368 - MER58A DNA MER1_type 0 224 10 4043 232 43 41 chr10 12860940 12862218 -132727070 + L1ME1 LINE L1 3384 4664 -1482 2427 219 50 23 chr10 12862219 12862684 -132726604 + L1ME1 LINE L1 5266 5756 -410 2196 118 0 0 chr10 12862684 12862981 -132726307 + AluSg1 SINE Alu 1 297 -12 2427 219 50 23 chr10 12862981 12863180 -132726108 + L1ME1 LINE L1 5756 5948 -218 1949 96 0 8 chr10 12863180 12863441 -132725847 + AluY SINE Alu 1 259 -52 5623 235 88 7 chr10 12863550 12865923 -132723365 - L1MC3 LINE L1 -743 5821 4721 307 246 42 0 chr10 12865949 12866067 -132723221 - L1MC3 LINE L1 -2989 3575 3453 1136 212 63 27 chr10 12866076 12866779 -132722509 - L1MC3 LINE L1 -4499 2065 1090 1011 152 40 25 chr10 12866779 12866977 -132722311 + LTR54 LTR ERV1 1 201 -309 1583 268 70 75 chr10 12866977 12867855 -132721433 - L1MC3 LINE L1 -5072 973 101 2177 102 3 0 chr10 12868631 12868916 -132720372 + AluSx SINE Alu 1 286 -26 30 0 0 0 chr10 12868916 12868946 -132720342 + AT_rich Low_complexity Low_complexity 1 30 0 284 172 0 16 chr10 12869183 12869247 -132720041 + (CATATA)n Simple_repeat Simple_repeat 2 64 0 1558 248 45 45 chr10 12869498 12870003 -132719285 + MLT1D LTR MaLR 1 505 0 21 0 0 0 chr10 12870061 12870082 -132719206 + AT_rich Low_complexity Low_complexity 1 21 0 255 379 93 6 chr10 12870925 12871086 -132718202 + MIR3 SINE MIR 7 181 -27 181 121 0 52 chr10 12871087 12871145 -132718143 + (CAAAA)n Simple_repeat Simple_repeat 1 55 0 22 70 0 0 chr10 12871182 12871225 -132718063 + AT_rich Low_complexity Low_complexity 1 43 0 22 0 0 0 chr10 12871407 12871429 -132717859 + AT_rich Low_complexity Low_complexity 1 22 0 1913 208 36 8 chr10 12871650 12872035 -132717253 + MSTD LTR MaLR 1 396 0 1250 313 31 12 chr10 12872314 12872733 -132716555 + LTR16A LTR ERVL 15 441 -9 1224 201 60 104 chr10 12874489 12874772 -132714516 - MER34 LTR ERV1 0 542 295 384 22 0 0 chr10 12874772 12874817 -132714471 + (CA)n Simple_repeat Simple_repeat 2 46 0 1224 201 60 104 chr10 12874817 12875100 -132714188 - MER34 LTR ERV1 -247 295 1 2527 78 0 0 chr10 12876742 12877050 -132712238 + AluSq SINE Alu 1 308 -5 352 267 133 0 chr10 12877537 12877642 -132711646 + L2 LINE L2 3194 3312 -1 2292 83 7 3 chr10 12878794 12879094 -132710194 + AluSp SINE Alu 1 301 -12 435 195 23 0 chr10 12879224 12879311 -132709977 + MIR3 SINE MIR 89 177 -31 1827 170 3 3 chr10 12879884 12880178 -132709110 + AluJo SINE Alu 1 294 -18 992 285 156 41 chr10 12880886 12881854 -132707434 - HAL1 LINE L1 -938 1569 491 283 203 145 0 chr10 12882082 12882151 -132707137 - HAL1 LINE L1 -2305 202 124 1351 184 88 42 chr10 12882214 12882568 -132706720 + MLT1B LTR MaLR 21 390 0 24 53 0 0 chr10 12882648 12882686 -132706602 + AT_rich Low_complexity Low_complexity 1 38 0 11552 232 19 11 chr10 12883367 12886246 -132703042 + L1PA15 LINE L1 1733 4635 -1511 2276 94 10 3 chr10 12886255 12886562 -132702726 + AluSc SINE Alu 1 309 0 4487 144 4 0 chr10 12886565 12887272 -132702016 + L1PA15 LINE L1 5456 6165 0 23 0 0 0 chr10 12888241 12888264 -132701024 + AT_rich Low_complexity Low_complexity 1 23 0 365 217 100 70 chr10 12889055 12889285 -132700003 + MER34C LTR ERV1 348 584 -1 452 250 61 49 chr10 12889478 12889684 -132699604 - MER110-int LTR ERV1 -1652 5149 2695 731 130 9 9 chr10 12889714 12889829 -132699459 - AluSp/q SINE Alu -18 295 181 1552 183 3 45 chr10 12890019 12890129 -132699159 + AluJb SINE Alu 3 116 -196 1967 149 24 53 chr10 12890129 12890504 -132698784 - THE1B LTR MaLR 0 364 1 11399 100 24 1 chr10 12890505 12892048 -132697240 - THE1B-int LTR MaLR -1 1579 2 1829 163 13 43 chr10 12892049 12892424 -132696864 - THE1B LTR MaLR 0 364 1 1552 183 3 45 chr10 12892424 12892620 -132696668 + AluJb SINE Alu 115 300 -12 1723 153 65 121 chr10 12892667 12893156 -132696132 - MER4C LTR ERV1 0 465 4 223 163 0 0 chr10 12893786 12893829 -132695459 + CT-rich Low_complexity Low_complexity 2 44 0 1445 196 36 11 chr10 12896407 12896687 -132692601 + AluJo SINE Alu 2 288 -24 512 211 6 25 chr10 12896689 12896850 -132692438 + GA-rich Low_complexity Low_complexity 3 160 0 185 256 0 0 chr10 12897128 12897167 -132692121 + MIR3 SINE MIR 116 154 -54 493 145 24 0 chr10 12897275 12897358 -132691930 - L1MA3 LINE L1 -3 6302 6218 18079 35 2 1 chr10 12898380 12900905 -132688383 - L1P2 LINE L1 -381 5773 3248 1697 175 18 33 chr10 12901013 12901344 -132687944 - L1P4 LINE L1 -380 5786 5461 847 69 0 0 chr10 12901345 12901447 -132687841 + AluY SINE Alu 196 297 -14 1444 182 20 3 chr10 12901447 12901843 -132687445 - L1P4 LINE L1 -695 5470 5010 206 250 0 0 chr10 12902203 12902247 -132687041 + CT-rich Low_complexity Low_complexity 2 45 0 289 176 0 0 chr10 12902550 12902601 -132686687 + L1M1 LINE L1 2027 2077 -5488 180 296 82 20 chr10 12903056 12903154 -132686134 - L2 LINE L2 -172 3100 2997 3616 129 0 19 chr10 12903841 12904258 -132685030 + MER1A DNA MER1_type 2 408 -2292 1931 125 60 0 chr10 12904258 12904539 -132684749 + AluSx SINE Alu 1 298 -14 3616 129 0 19 chr10 12904539 12904657 -132684631 + MER1A DNA MER1_type 408 527 0 2322 90 0 3 chr10 12905539 12905828 -132683460 - AluSx SINE Alu -24 288 1 330 254 103 67 chr10 12906357 12906581 -132682707 + MIR SINE MIR 20 251 -11 248 311 25 16 chr10 12906611 12906733 -132682555 - MIR SINE MIR -105 157 35 243 170 0 0 chr10 12906917 12906964 -132682324 + CT-rich Low_complexity Low_complexity 5 51 0 2155 98 11 0 chr10 12906964 12907241 -132682047 - AluSx SINE Alu -32 280 1 1521 175 20 33 chr10 12907327 12907630 -132681658 - AluJo SINE Alu -13 299 1 284 254 0 15 chr10 12909061 12909128 -132680160 - L2 LINE L2 0 3313 3248 378 304 119 49 chr10 12909434 12910006 -132679282 - L2 LINE L2 -453 2861 2250 2504 76 0 10 chr10 12910054 12910368 -132678920 + AluY SINE Alu 1 311 0 1915 157 3 0 chr10 12911065 12911351 -132677937 + AluSq SINE Alu 6 292 -21 406 167 25 142 chr10 12911742 12911806 -132677482 + MER5B DNA MER1_type 1 46 -132 1446 176 93 17 chr10 12911806 12912096 -132677192 + AluJo SINE Alu 1 312 0 406 167 25 142 chr10 12912096 12912151 -132677137 + MER5B DNA MER1_type 46 106 -72 2364 100 0 0 chr10 12913057 12913366 -132675922 + AluSq SINE Alu 3 311 -2 2313 78 0 14 chr10 12913689 12913985 -132675303 - AluY SINE Alu -3 308 17 1222 224 68 36 chr10 12914814 12915198 -132674090 - MSTD LTR MaLR 0 396 1 1055 192 63 1 chr10 12915757 12915990 -132673298 - MLT2B1 LTR ERVL 0 520 223 951 200 6 0 chr10 12915992 12916162 -132673126 + FRAM SINE Alu 1 170 -6 1261 153 9 31 chr10 12916162 12916385 -132672903 - MLT2B2 LTR ERVL -297 218 1 413 36 18 0 chr10 12916448 12916503 -132672785 + (GA)n Simple_repeat Simple_repeat 1 56 0 224 236 0 0 chr10 12916742 12916797 -132672491 + T-rich Low_complexity Low_complexity 1 55 0 2499 51 0 41 chr10 12917585 12917900 -132671388 + AluY SINE Alu 5 306 -5 23 0 0 53 chr10 12918059 12918075 -132671213 + AT_rich Low_complexity Low_complexity 1 16 -20 2257 101 0 0 chr10 12918075 12918362 -132670926 + AluSg SINE Alu 1 287 -23 23 0 0 53 chr10 12918362 12918383 -132670905 + AT_rich Low_complexity Low_complexity 16 36 0 2399 99 0 3 chr10 12918552 12918856 -132670432 + AluSq SINE Alu 1 303 -10 1338 161 60 12 chr10 12918869 12919118 -132670170 + AluSx SINE Alu 32 292 -20 342 188 9 134 chr10 12919255 12919320 -132669968 + MER5A DNA MER1_type 9 56 -133 2167 110 0 28 chr10 12919320 12919639 -132669649 + AluSg SINE Alu 1 310 0 342 188 9 134 chr10 12919639 12919685 -132669603 + MER5A DNA MER1_type 56 106 -83 259 398 31 0 chr10 12919848 12919976 -132669312 + L2 LINE L2 3119 3250 -22 1087 147 107 13 chr10 12920295 12920519 -132668769 + THE1C LTR MaLR 1 245 -130 1777 146 13 29 chr10 12920768 12921076 -132668212 - AluJo SINE Alu -9 303 1 1565 158 21 79 chr10 12921752 12922124 -132667164 - AluJo SINE Alu 0 354 2 1989 140 0 52 chr10 12922440 12922768 -132666520 - AluSx SINE Alu -1 311 1 2252 145 51 17 chr10 12922809 12923222 -132666066 - MSTA LTR MaLR -1 427 1 2272 123 0 0 chr10 12923231 12923541 -132665747 - AluSg SINE Alu 0 310 1 1308 248 174 2 chr10 12923699 12924159 -132665129 + Charlie7 DNA MER1_type 1 539 -2073 459 227 75 64 chr10 12924179 12924474 -132664814 + Charlie7 DNA MER1_type 2314 2611 -1 2782 132 6 9 chr10 12924483 12924939 -132664349 - MER1A DNA MER1_type 0 529 30 278 261 34 116 chr10 12926108 12926221 -132663067 - MIR SINE MIR -8 254 164 1696 157 0 60 chr10 12926221 12926414 -132662874 - AluJo SINE Alu -8 304 136 2310 65 3 78 chr10 12926414 12926736 -132662552 + AluSp SINE Alu 1 298 -15 1696 157 0 60 chr10 12926736 12926860 -132662428 - AluJo SINE Alu -176 136 6 278 261 34 116 chr10 12926860 12926953 -132662335 - MIR SINE MIR -98 164 65 186 43 0 0 chr10 12927440 12927463 -132661825 + (TTTCC)n Simple_repeat Simple_repeat 4 26 0 180 0 0 0 chr10 12928489 12928509 -132660779 + (T)n Simple_repeat Simple_repeat 1 20 0 704 76 0 50 chr10 12929047 12929166 -132660122 - L1PB1 LINE L1 -3 6148 6036 495 296 40 25 chr10 12930490 12930689 -132658599 + MIR3 SINE MIR 1 202 -6 537 268 155 5 chr10 12931012 12931206 -132658082 - MIR SINE MIR -4 258 36 378 258 96 36 chr10 12931390 12931557 -132657731 + MIR SINE MIR 36 212 -50 1979 134 3 3 chr10 12931651 12931958 -132657330 + AluSx SINE Alu 2 308 -4 343 203 29 0 chr10 12932484 12932553 -132656735 - Tigger7 DNA MER2_type 0 2487 2417 1253 167 8 72 chr10 12932571 12932822 -132656466 - Tigger7 DNA MER2_type -466 267 33 1559 158 3 91 chr10 12932900 12933230 -132656058 + AluJb SINE Alu 1 301 -11 201 240 144 48 chr10 12934277 12934423 -132654865 + MIR SINE MIR 91 250 -12 528 137 0 0 chr10 12935319 12935392 -132653896 + AluS SINE Alu 2 74 -239 847 176 85 6 chr10 12936429 12936605 -132652683 + MIR SINE MIR 31 220 -42 219 314 177 8 chr10 12936838 12936962 -132652326 - L2 LINE L2 -2 3311 3167 1575 206 41 16 chr10 12938867 12939231 -132650057 - MLT1A2 LTR MaLR 0 374 2 1428 92 0 5 chr10 12939544 12939739 -132649549 - AluSq SINE Alu -20 293 100 275 148 0 16 chr10 12941036 12941097 -132648191 + (TCCC)n Simple_repeat Simple_repeat 3 62 0 3570 261 44 37 chr10 12943164 12943304 -132645984 + L2 LINE L2 1562 1700 -1614 248 0 0 30 chr10 12943304 12943337 -132645951 + (CAAAC)n Simple_repeat Simple_repeat 3 34 0 3570 261 44 37 chr10 12943337 12944411 -132644877 + L2 LINE L2 1700 2784 -530 503 255 78 31 chr10 12945451 12945643 -132643645 - MIR SINE MIR -59 203 3 212 204 23 0 chr10 12945681 12945725 -132643563 + L2 LINE L2 3226 3270 -2 476 289 64 13 chr10 12945749 12945905 -132643383 - MIR SINE MIR -18 244 81 807 148 22 15 chr10 12945912 12946047 -132643241 - AluJb SINE Alu -18 294 159 1865 123 27 7 chr10 12946235 12946535 -132642753 + AluSx SINE Alu 1 306 -6 395 245 0 82 chr10 12946536 12946634 -132642654 + L1MC4 LINE L1 6614 6703 -1339 324 308 22 0 chr10 12946567 12946658 -132642630 - L1MC4 LINE L1 -1336 6706 6614 * 389 255 0 43 chr10 12946674 12946768 -132642520 + L1MC4 LINE L1 6614 6703 -1339 182 328 17 0 chr10 12947088 12947146 -132642142 + L2 LINE L2 3246 3304 -9 2166 114 0 3 chr10 12948676 12948982 -132640306 + AluSx SINE Alu 1 305 -7 195 42 0 0 chr10 12949084 12949108 -132640180 + (TG)n Simple_repeat Simple_repeat 2 25 0 1917 206 51 2 chr10 12949125 12949558 -132639730 - L1MB1 LINE L1 -2 6166 5713 216 333 241 0 chr10 12949673 12949781 -132639507 + MIR SINE MIR 106 239 -23 195 125 18 54 chr10 12949826 12949882 -132639406 + CT-rich Low_complexity Low_complexity 3 56 0 270 136 0 0 chr10 12949996 12950040 -132639248 + (A)n Simple_repeat Simple_repeat 1 44 0 3368 168 20 54 chr10 12950161 12950390 -132638898 - L1MB7 LINE L1 -23 6161 5926 2058 112 10 0 chr10 12950390 12950686 -132638602 + AluSx SINE Alu 1 299 -13 3368 168 20 54 chr10 12950686 12951195 -132638093 - L1MB7 LINE L1 -258 5926 5448 410 206 22 0 chr10 12951271 12951363 -132637925 + AluJb SINE Alu 14 107 -205 796 159 0 23 chr10 12951685 12951817 -132637471 - FLAM_A SINE Alu -2 140 12 226 136 68 51 chr10 12951822 12951881 -132637407 - AluJo SINE Alu -160 142 83 1041 166 135 0 chr10 12953047 12953240 -132636048 + MER20 DNA MER1_type 1 219 0 2029 99 31 3 chr10 12954489 12954781 -132634507 + AluSx SINE Alu 1 300 -12 230 325 32 24 chr10 12955806 12955929 -132633359 - MIR3 SINE MIR -7 201 78 848 156 0 46 chr10 12956115 12956288 -132633000 + FRAM SINE Alu 2 166 -10 1204 72 63 5 chr10 12956735 12956942 -132632346 + AluSx SINE Alu 1 219 -93 285 105 0 0 chr10 12957058 12957096 -132632192 + Alu SINE Alu 255 292 -10 2387 230 61 8 chr10 12957127 12957766 -132631522 + L1M4 LINE L1 2366 3038 -3108 347 287 185 20 chr10 12958507 12958761 -132630527 + HAL1 LINE L1 982 1277 -1230 216 176 9 46 chr10 12958761 12958869 -132630419 + GA-rich Low_complexity Low_complexity 2 105 0 224 273 150 16 chr10 12959200 12959278 -132630010 - MIR SINE MIR -65 143 78 1917 146 3 0 chr10 12959278 12959579 -132629709 + AluJb SINE Alu 1 302 -10 224 273 150 16 chr10 12959579 12959625 -132629663 - MIR SINE MIR -130 78 40 623 188 182 7 chr10 12959930 12960084 -132629204 - MER5A DNA MER1_type -2 187 7 307 53 0 0 chr10 12960190 12960228 -132629060 - THE1A LTR MaLR 0 355 318 425 19 19 0 chr10 12960400 12960454 -132628834 + (TGGA)n Simple_repeat Simple_repeat 1 55 0 644 250 14 24 chr10 12961868 12962048 -132627240 + MER5A DNA MER1_type 4 181 -8 319 148 0 99 chr10 12962532 12962613 -132626675 - AluS SINE Alu 0 301 229 1829 100 7 43 chr10 12962714 12963038 -132626250 + AluSx SINE Alu 13 326 0 201 325 216 36 chr10 12963232 12963426 -132625862 + MIR SINE MIR 5 233 -29 1754 132 3 49 chr10 12964059 12964363 -132624925 - AluJb SINE Alu -22 290 1 828 123 0 0 chr10 12965352 12965474 -132623814 + AluSg/x SINE Alu 181 302 -10 269 256 68 60 chr10 12965782 12965899 -132623389 - MIR SINE MIR -26 236 119 522 225 11 112 chr10 12966118 12966231 -132623057 - MER5B DNA MER1_type -18 160 70 1718 170 0 31 chr10 12966231 12966549 -132622739 - AluJo SINE Alu -4 308 1 522 225 11 112 chr10 12966549 12966613 -132622675 - MER5B DNA MER1_type -108 70 1 1946 134 0 3 chr10 12967433 12967725 -132621563 - AluSx SINE Alu -11 301 11 1673 167 0 14 chr10 12968109 12968403 -132620885 - AluJb SINE Alu -22 290 1 2393 181 30 8 chr10 12969186 12969655 -132619633 - L1MB3 LINE L1 -1 6182 5704 293 319 26 17 chr10 12969788 12969904 -132619384 + MER5A DNA MER1_type 47 163 -26 223 250 62 83 chr10 12970192 12970336 -132618952 - MER91A DNA MER1_type 0 196 56 2269 68 0 13 chr10 12971050 12971357 -132617931 + AluY SINE Alu 1 303 -8 1986 130 0 3 chr10 12971438 12971731 -132617557 - AluSx SINE Alu -20 292 1 368 320 22 26 chr10 12971732 12971917 -132617371 - MIR SINE MIR -60 202 22 222 37 0 0 chr10 12971984 12972011 -132617277 + (GGA)n Simple_repeat Simple_repeat 1 27 0 1927 194 10 70 chr10 12973202 12973619 -132615669 + MLT2B2 LTR ERVL 3 394 -121 249 229 46 0 chr10 12973834 12973965 -132615323 + (CACAC)n Simple_repeat Simple_repeat 3 139 0 201 167 37 0 chr10 12973974 12974028 -132615260 + C-rich Low_complexity Low_complexity 1 56 0 214 77 0 0 chr10 12974098 12974124 -132615164 + (CA)n Simple_repeat Simple_repeat 2 27 0 346 281 0 22 chr10 12975040 12975218 -132614070 + (CATA)n Simple_repeat Simple_repeat 1 174 0 227 311 60 48 chr10 12975555 12975722 -132613566 + MIR SINE MIR 15 183 -79 692 241 77 19 chr10 12976396 12976603 -132612685 - MER20 DNA MER1_type 0 219 1 214 270 32 0 chr10 12976680 12976743 -132612545 + L2 LINE L2 3207 3271 -1 386 332 117 5 chr10 12977151 12977356 -132611932 + MIR SINE MIR 20 247 -15 276 239 60 0 chr10 12977560 12977627 -132611661 - MIR SINE MIR -136 126 56 2264 99 0 0 chr10 12977935 12978237 -132611051 - AluSq SINE Alu -1 312 11 225 176 162 27 chr10 12978557 12978631 -132610657 - Charlie6 DNA MER1_type -1301 2199 2116 2133 128 6 3 chr10 12981266 12981578 -132607710 - AluSq SINE Alu 0 313 1 1536 138 50 31 chr10 12981853 12982113 -132607175 - THE1B LTR MaLR -99 265 1 21 0 0 0 chr10 12982491 12982512 -132606776 + AT_rich Low_complexity Low_complexity 1 21 0 1150 106 0 0 chr10 12982626 12982777 -132606511 + AluSg/x SINE Alu 158 308 -4 1875 254 72 33 chr10 12983318 12983395 -132605893 + L1MDa LINE L1 21 94 -6446 201 74 0 0 chr10 12983395 12983422 -132605866 + (CA)n Simple_repeat Simple_repeat 2 28 0 1875 254 72 33 chr10 12983422 12984116 -132605172 + L1MDa LINE L1 94 1051 -5489 204 40 0 0 chr10 12984116 12984141 -132605147 + (CA)n Simple_repeat Simple_repeat 2 26 0 549 218 46 17 chr10 12984141 12984315 -132604973 + L1M4 LINE L1 4263 4441 -1705 304 135 27 54 chr10 12984325 12984399 -132604889 + L1M4 LINE L1 4377 4448 -1698 2167 218 59 52 chr10 12984401 12985175 -132604113 + L1M4 LINE L1 4377 5156 -990 275 103 0 0 chr10 12985639 12985678 -132603610 - MLT1K LTR MaLR -4 584 546 2047 132 4 0 chr10 12988352 12988656 -132600632 - AluSx SINE Alu 0 305 1 259 310 14 0 chr10 12989681 12989752 -132599536 - L2 LINE L2 -40 3232 3161 1160 119 5 60 chr10 12990877 12991062 -132598226 + AluSg/x SINE Alu 126 300 -10 275 261 43 22 chr10 12991599 12991691 -132597597 - MIR SINE MIR -92 170 77 2538 129 20 0 chr10 12993280 12993637 -132595651 + THE1B LTR MaLR 1 364 0 2322 110 0 0 chr10 12993967 12994267 -132595021 - AluSc SINE Alu -9 300 1 3431 69 0 2 chr10 12994293 12994730 -132594558 + L1PA10 LINE L1 5724 6159 -9 277 279 224 22 chr10 12995020 12995203 -132594085 + MLT1J LTR MaLR 292 511 0 1819 141 31 10 chr10 12995342 12995632 -132593656 + AluJb SINE Alu 1 296 -16 2211 120 3 13 chr10 12996595 12996904 -132592384 + AluSx SINE Alu 1 306 -6 183 80 0 0 chr10 12997030 12997055 -132592233 + (TG)n Simple_repeat Simple_repeat 2 26 0 2359 105 0 6 chr10 12997669 12997983 -132591305 + AluSx SINE Alu 1 312 0 1378 193 113 22 chr10 12998817 12999092 -132590196 - AluJo SINE Alu -12 300 1 2212 116 10 0 chr10 12999377 12999678 -132589610 + AluSx SINE Alu 1 304 -8 200 283 182 0 chr10 12999764 12999863 -132589425 - MIR SINE MIR -32 230 114 288 111 0 0 chr10 13000274 13000319 -132588969 + (CA)n Simple_repeat Simple_repeat 1 45 0 604 213 7 7 chr10 13000517 13000653 -132588635 - L1MA5 LINE L1 -4 6296 6161 1829 87 17 0 chr10 13000668 13000899 -132588389 - AluSx SINE Alu -77 235 1 293 188 78 0 chr10 13001819 13001883 -132587405 + Charlie3 DNA MER1_type 46 114 -2596 300 24 24 0 chr10 13001902 13001943 -132587345 - MER63 DNA MER1_type -1019 42 1 414 323 62 12 chr10 13001950 13002111 -132587177 + L2 LINE L2 1859 2027 -1287 3702 104 11 33 chr10 13002160 13002228 -132587060 + MER1A DNA MER1_type 1 69 -2631 2317 93 0 10 chr10 13002228 13002539 -132586749 + AluY SINE Alu 1 308 -3 3702 104 11 33 chr10 13002539 13003009 -132586279 + MER1A DNA MER1_type 69 527 0 1336 158 0 0 chr10 13004226 13004441 -132584847 + L1PA13 LINE L1 5936 6150 -13 1088 150 0 18 chr10 13004506 13004673 -132584615 - FRAM SINE Alu -1 165 2 225 36 0 0 chr10 13004875 13004903 -132584385 - MLT2B2 LTR ERVL -10 505 478 222 91 0 0 chr10 13004903 13004936 -132584352 + (TG)n Simple_repeat Simple_repeat 1 33 0 2398 89 0 0 chr10 13005011 13005303 -132583985 + AluY SINE Alu 2 293 -18 2037 149 10 0 chr10 13007483 13007784 -132581504 + AluSx SINE Alu 1 304 -8 769 183 23 0 chr10 13007804 13007935 -132581353 + AluJo SINE Alu 2 135 -177 29 47 0 0 chr10 13007935 13007978 -132581310 + AT_rich Low_complexity Low_complexity 1 43 0 1944 131 4 0 chr10 13007988 13008256 -132581032 + AluJo SINE Alu 23 291 -21 22 0 0 0 chr10 13008256 13008278 -132581010 + AT_rich Low_complexity Low_complexity 1 22 0 4272 105 42 63 chr10 13009573 13009659 -132579629 - LTR8A LTR ERV1 0 727 641 2293 105 0 0 chr10 13009659 13009954 -132579334 + AluSg SINE Alu 1 295 -15 4272 105 42 63 chr10 13009954 13010610 -132578678 - LTR8A LTR ERV1 -86 641 1 774 324 15 8 chr10 13010691 13010950 -132578338 + MIR SINE MIR 2 262 0 2232 91 44 0 chr10 13011003 13011299 -132577989 - AluSg SINE Alu -1 309 1 431 220 30 0 chr10 13011549 13011649 -132577639 - MER97b DNA MER1_type? -894 159 57 560 241 20 89 chr10 13011890 13011972 -132577316 + MER5A DNA MER1_type 1 87 -102 2366 94 7 0 chr10 13011972 13012279 -132577009 + AluSq SINE Alu 1 309 -4 560 241 20 89 chr10 13012279 13012399 -132576889 + MER5A DNA MER1_type 87 189 0 382 326 28 7 chr10 13012409 13012553 -132576735 + MIR SINE MIR 97 243 -19 1379 170 96 22 chr10 13012883 13013154 -132576134 + AluJo SINE Alu 1 291 -21 2536 70 0 10 chr10 13013159 13013472 -132575816 + AluY SINE Alu 1 310 -1 263 311 110 17 chr10 13013605 13013904 -132575384 + L2 LINE L2 1862 2188 -1126 2209 104 3 0 chr10 13014046 13014333 -132574955 - AluSx SINE Alu -24 288 1 2291 98 0 3 chr10 13015161 13015456 -132573832 - AluSg SINE Alu -16 294 1 2776 166 4 4 chr10 13015831 13016326 -132572962 + L1MB3 LINE L1 5648 6142 -41 3513 118 11 13 chr10 13016327 13016876 -132572412 + L1PA13 LINE L1 5616 6163 0 250 77 0 39 chr10 13016898 13016950 -132572338 + L1MB4 LINE L1 6128 6177 -3 2245 84 30 7 chr10 13016975 13017272 -132572016 + AluY SINE Alu 1 304 -7 765 265 57 5 chr10 13017802 13018013 -132571275 + MIR SINE MIR 41 262 0 1135 111 52 0 chr10 13018020 13018173 -132571115 - AluSg/x SINE Alu -15 297 137 208 318 111 74 chr10 13018267 13018647 -132570641 + L2 LINE L2 2877 3270 -2 2320 97 10 0 chr10 13018647 13018945 -132570343 + AluSx SINE Alu 1 301 -11 2261 124 0 9 chr10 13019404 13019719 -132569569 - AluJo SINE Alu 0 312 1 221 326 0 31 chr10 13020353 13020451 -132568837 + GA-rich Low_complexity Low_complexity 3 97 0 231 114 0 0 chr10 13020513 13020548 -132568740 + (CACG)n Simple_repeat Simple_repeat 1 35 0 2105 135 3 0 chr10 13020641 13020952 -132568336 + AluSx SINE Alu 1 312 0 331 195 49 0 chr10 13021080 13021162 -132568126 + L1ME4a LINE L1 5957 6042 -79 1743 179 0 19 chr10 13023096 13023403 -132565885 + AluJb SINE Alu 1 301 -11 832 157 31 0 chr10 13023444 13023603 -132565685 + L1MD1 LINE L1 6079 6242 0 2000 155 0 0 chr10 13024005 13024301 -132564987 + AluSx SINE Alu 1 296 -16 1736 171 0 17 chr10 13024873 13025032 -132564256 - AluJo SINE Alu -30 282 129 1996 107 0 4 chr10 13025032 13025295 -132563993 - AluY SINE Alu -12 299 38 1736 171 0 17 chr10 13025295 13025422 -132563866 - AluJo SINE Alu -183 129 1 197 138 0 0 chr10 13025426 13025455 -132563833 - MIR SINE MIR -62 146 118 229 287 103 0 chr10 13025579 13025695 -132563593 + MIR SINE MIR 19 151 -69 2279 120 0 0 chr10 13025803 13026112 -132563176 + AluSx SINE Alu 1 309 -3 2554 64 0 0 chr10 13026626 13026923 -132562365 - AluY SINE Alu -14 297 1 1862 133 28 88 chr10 13027349 13027748 -132561540 - THE1C LTR MaLR 0 375 1 2158 143 0 7 chr10 13028019 13028326 -132560962 + AluSx SINE Alu 1 305 -7 1060 139 0 24 chr10 13028597 13028763 -132560525 + FRAM SINE Alu 1 162 -4 2335 102 0 7 chr10 13028992 13029297 -132559991 + AluSc SINE Alu 1 303 -6 2423 99 0 0 chr10 13029741 13030043 -132559245 - AluSc SINE Alu -7 302 1 1871 159 0 22 chr10 13030585 13030724 -132558564 + AluJo SINE Alu 1 142 -170 2065 135 16 0 chr10 13030724 13031027 -132558261 + AluSg SINE Alu 1 308 -2 1871 159 0 22 chr10 13031027 13031201 -132558087 + AluJo SINE Alu 142 307 -5 2325 111 0 0 chr10 13032273 13032579 -132556709 + AluSx SINE Alu 1 306 -6 1793 148 3 55 chr10 13032718 13033039 -132556249 + AluJo SINE Alu 1 294 -18 322 326 65 35 chr10 13033092 13033322 -132555966 + L2 LINE L2 3077 3313 0 1258 266 22 50 chr10 13033579 13033646 -132555642 - L1MC4a LINE L1 -1811 5997 5930 2244 94 17 0 chr10 13033646 13033944 -132555344 - AluSc SINE Alu -6 303 1 1258 266 22 50 chr10 13033944 13034046 -132555242 - L1MC4a LINE L1 -1878 5930 5827 2028 119 0 0 chr10 13034046 13034339 -132554949 - AluSx SINE Alu -17 295 3 1258 266 22 50 chr10 13034339 13034623 -132554665 - L1MC4a LINE L1 -1981 5827 5556 1324 120 57 0 chr10 13034659 13034868 -132554420 - AluJo SINE Alu -6 306 86 215 385 0 0 chr10 13035522 13035587 -132553701 + L3 LINE CR1 325 389 -1188 591 201 101 22 chr10 13035714 13035893 -132553395 + L1ME3 LINE L1 5672 5864 -298 433 169 0 0 chr10 13035904 13035975 -132553313 + L1ME3 LINE L1 5914 5984 -178 1698 158 0 7 chr10 13035976 13036255 -132553033 + AluJb SINE Alu 1 277 -35 1752 159 3 3 chr10 13036690 13036979 -132552309 + AluJo SINE Alu 4 292 -20 2141 109 0 0 chr10 13036988 13037290 -132551998 + AluY SINE Alu 1 302 -9 593 269 185 40 chr10 13037445 13037769 -132551519 + L3 LINE CR1 609 979 -598 2400 168 32 42 chr10 13037816 13037962 -132551326 + L1MB3 LINE L1 5681 5827 -356 2098 120 0 7 chr10 13037962 13038271 -132551017 + AluSg SINE Alu 1 307 -3 2400 168 32 42 chr10 13038271 13038582 -132550706 + L1MB3 LINE L1 5827 6135 -48 1944 102 62 0 chr10 13038582 13038856 -132550432 + AluSg SINE Alu 1 291 -19 2400 168 32 42 chr10 13038856 13038897 -132550391 + L1MB3 LINE L1 6135 6175 -8 307 234 40 8 chr10 13038919 13039043 -132550245 + (TA)n Simple_repeat Simple_repeat 2 129 0 24 67 0 0 chr10 13039134 13039179 -132550109 + AT_rich Low_complexity Low_complexity 1 45 0 180 216 227 23 chr10 13039224 13039312 -132549976 + L3 LINE CR1 964 1069 -508 192 40 0 0 chr10 13039658 13039683 -132549605 + (CA)n Simple_repeat Simple_repeat 2 26 0 192 329 0 47 chr10 13041052 13041137 -132548151 - MIR3 SINE MIR -9 199 119 478 150 30 0 chr10 13041257 13041357 -132547931 + CT-rich Low_complexity Low_complexity 3 105 0 1866 131 25 0 chr10 13041443 13041726 -132547562 - AluSx SINE Alu -22 290 1 595 122 10 0 chr10 13041737 13041835 -132547453 - L1MA9 LINE L1 0 6312 6214 233 189 75 0 chr10 13041811 13041864 -132547424 - L1MA8 LINE L1 -27 6264 6208 * 748 208 0 6 chr10 13041841 13041996 -132547292 - L1MA9 LINE L1 -30 6261 6115 185 247 135 45 chr10 13042025 13042114 -132547174 - MIR SINE MIR -163 99 3 501 260 89 6 chr10 13042403 13042572 -132546716 - MIR SINE MIR 0 262 80 752 142 71 8 chr10 13042957 13043084 -132546204 + AluJ SINE Alu 2 136 -176 763 142 71 0 chr10 13043130 13043257 -132546031 + FLAM_C SINE Alu 3 138 -5 1894 127 3 23 chr10 13043310 13043617 -132545671 + AluSq SINE Alu 12 312 -1 648 206 0 0 chr10 13043618 13043720 -132545568 + AluJo/FRAM SINE Alu 131 232 -80 21 57 0 0 chr10 13043721 13043756 -132545532 + AT_rich Low_complexity Low_complexity 1 35 0 1342 234 4 0 chr10 13043864 13044142 -132545146 - AluJo SINE Alu -33 279 1 4259 89 4 0 chr10 13044913 13045465 -132543823 + MER41A LTR ERV1 1 554 0 5288 120 28 68 chr10 13046226 13047167 -132542121 + MER4D LTR ERV1 1 903 0 4190 78 7 26 chr10 13047240 13047632 -132541656 + MER41A LTR ERV1 1 380 -174 2123 123 3 0 chr10 13047632 13047941 -132541347 + AluSq SINE Alu 1 310 -3 4190 78 7 26 chr10 13047941 13048113 -132541175 + MER41A LTR ERV1 380 554 0 232 169 0 72 chr10 13048547 13048630 -132540658 + A-rich Low_complexity Low_complexity 3 79 0 2220 96 0 0 chr10 13049060 13049362 -132539926 - AluY SINE Alu -9 302 1 1067 141 80 5 chr10 13049746 13049945 -132539343 - AluSg/x SINE Alu -13 297 84 1094 215 62 4 chr10 13050315 13050589 -132538699 - AluSx SINE Alu -7 305 16 1180 194 158 30 chr10 13050604 13050638 -132538650 - MER39 LTR ERV1 -77 630 602 1673 171 3 7 chr10 13050638 13050937 -132538351 + AluJb SINE Alu 1 298 -14 1180 194 158 30 chr10 13050937 13051231 -132538057 - MER39 LTR ERV1 -105 602 260 441 288 72 8 chr10 13051208 13051333 -132537955 - MER39 LTR ERV1 -574 133 1 * 205 300 75 25 chr10 13051351 13051431 -132537857 + L2 LINE L2 3153 3236 -36 255 217 67 0 chr10 13051446 13051506 -132537782 - L1ME1 LINE L1 -5 6161 6098 2167 100 0 10 chr10 13051547 13051847 -132537441 + AluSx SINE Alu 1 297 -15 2250 113 33 36 chr10 13052019 13052382 -132536906 + THE1B LTR MaLR 1 362 -2 1359 167 23 0 chr10 13053974 13054195 -132535093 + MER68 LTR ERV1 43 268 -294 2436 177 16 5 chr10 13054198 13054638 -132534650 + L1MC1 LINE L1 5880 6324 -9 1960 108 0 11 chr10 13054639 13054918 -132534370 + AluSx SINE Alu 1 276 -36 400 127 13 13 chr10 13054918 13054997 -132534291 + (TAGA)n Simple_repeat Simple_repeat 1 79 0 1265 214 30 24 chr10 13055012 13055307 -132533981 + MER68 LTR ERV1 257 553 -9 2202 98 6 16 chr10 13056883 13057199 -132532089 - AluSq SINE Alu 0 313 1 890 170 0 0 chr10 13057997 13058144 -132531144 + FRAM SINE Alu 1 144 -32 671 189 6 17 chr10 13059425 13059605 -132529683 + (TTCA)n Simple_repeat Simple_repeat 3 180 0 398 188 10 0 chr10 13059617 13059713 -132529575 + (TTCA)n Simple_repeat Simple_repeat 2 98 0 23 0 0 0 chr10 13061028 13061051 -132528237 + AT_rich Low_complexity Low_complexity 1 23 0 1868 128 4 0 chr10 13061092 13061366 -132527922 + AluSx SINE Alu 13 287 -25 252 0 0 0 chr10 13061366 13061394 -132527894 + (CAT)n Simple_repeat Simple_repeat 2 29 0 2201 121 0 0 chr10 13062490 13062796 -132526492 + AluSx SINE Alu 1 306 -6 238 261 111 25 chr10 13062830 13063029 -132526259 - L2 LINE L2 -218 3054 2839 1638 202 38 6 chr10 13063092 13063434 -132525854 - MLT1A1 LTR MaLR -12 353 1 229 391 38 11 chr10 13063434 13063695 -132525593 - L2 LINE L2 -526 2788 2521 1648 48 0 19 chr10 13063892 13064101 -132525187 + L1PA7 LINE L1 5940 6144 -10 2213 107 0 0 chr10 13064124 13064462 -132524826 + AluSg SINE Alu 1 338 0 274 266 63 0 chr10 13064702 13064781 -132524507 + LTR33 LTR ERVL 134 217 -304 239 273 30 10 chr10 13064899 13064998 -132524290 + LTR33 LTR ERVL 417 517 -4 1501 143 11 40 chr10 13065042 13065147 -132524141 + AluJo SINE Alu 31 138 -174 1938 141 0 0 chr10 13065147 13065446 -132523842 + AluSx SINE Alu 1 299 -13 1501 143 11 40 chr10 13065446 13065612 -132523676 + AluJo SINE Alu 138 294 -18 2083 110 7 0 chr10 13065617 13065918 -132523370 + AluSp SINE Alu 1 303 -10 328 296 78 115 chr10 13066374 13066580 -132522708 - L2 LINE L2 0 3272 3089 2057 135 0 0 chr10 13066580 13066892 -132522396 + AluSx SINE Alu 1 312 0 328 296 78 115 chr10 13066892 13067110 -132522178 - L2 LINE L2 -183 3089 2864 316 252 114 32 chr10 13067149 13067272 -132522016 + MER94 DNA DNA 1 133 -1 983 165 0 0 chr10 13067335 13067499 -132521789 - AluJb SINE Alu -12 300 137 325 319 48 82 chr10 13067500 13068040 -132521248 - L2 LINE L2 -567 2747 2226 1571 185 10 7 chr10 13068628 13068930 -132520358 - AluJo SINE Alu -9 303 1 402 143 43 0 chr10 13069292 13069362 -132519926 - AluJ/FLAM SINE Alu -229 73 1 2237 99 0 0 chr10 13069622 13069924 -132519364 + AluSx SINE Alu 1 302 -10 1995 107 29 0 chr10 13070486 13070767 -132518521 + AluSx SINE Alu 1 289 -23 1511 132 0 0 chr10 13070852 13071079 -132518209 + AluSg/x SINE Alu 82 308 -2 2161 100 3 0 chr10 13072333 13072633 -132516655 + AluY SINE Alu 1 301 -10 339 25 0 0 chr10 13072919 13072959 -132516329 + (TG)n Simple_repeat Simple_repeat 1 40 0 196 263 0 79 chr10 13073470 13073546 -132515742 + L3 LINE CR1 1496 1565 -12 1601 155 3 25 chr10 13073981 13074265 -132515023 - AluJo SINE Alu -22 290 13 2074 99 17 13 chr10 13074499 13074801 -132514487 + AluSx SINE Alu 1 303 -9 230 224 0 0 chr10 13075294 13075343 -132513945 + CT-rich Low_complexity Low_complexity 2 50 0 569 294 162 5 chr10 13075421 13075618 -132513670 - MIR SINE MIR -2 260 33 805 141 0 0 chr10 13076675 13076796 -132512492 + AluJb SINE Alu 182 302 -10 2169 87 0 35 chr10 13077000 13077310 -132511978 + AluSq SINE Alu 1 299 -14 459 288 50 45 chr10 13078802 13079024 -132510264 + MIR SINE MIR 40 262 0 386 308 117 40 chr10 13079495 13079768 -132509520 + MLT1J1 LTR MaLR 100 393 -53 589 82 20 20 chr10 13080313 13080411 -132508877 + AluSg/x SINE Alu 163 260 -52 180 125 0 0 chr10 13080725 13080757 -132508531 + (TCTA)n Simple_repeat Simple_repeat 1 32 0 525 16 0 0 chr10 13080783 13080845 -132508443 + (TC)n Simple_repeat Simple_repeat 1 62 0 1050 214 20 12 chr10 13081590 13081838 -132507450 + AluJo SINE Alu 1 250 -62 1890 90 8 0 chr10 13081973 13082239 -132507049 - AluY SINE Alu -43 268 1 1244 321 141 12 chr10 13082244 13082963 -132506325 - L3 LINE CR1 -704 873 63 497 258 65 73 chr10 13083039 13083287 -132506001 - MIR SINE MIR -12 250 5 213 175 0 0 chr10 13085270 13085310 -132503978 + L2 LINE L2 3274 3313 0 1592 122 3 90 chr10 13086329 13086650 -132502638 + AluSq SINE Alu 1 293 -20 203 261 0 0 chr10 13087022 13087068 -132502220 + A-rich Low_complexity Low_complexity 3 48 0 243 220 68 0 chr10 13087832 13087891 -132501397 - MIR SINE MIR -71 191 129 195 377 37 33 chr10 13087904 13088098 -132501190 + L2 LINE L2 2620 2817 -497 4153 155 32 24 chr10 13088098 13088877 -132500411 - LTR1 LTR ERV1 0 785 1 195 377 37 33 chr10 13088877 13088926 -132500362 + L2 LINE L2 2817 2864 -450 2279 99 10 0 chr10 13089133 13089427 -132499861 - AluSx SINE Alu -15 297 1 482 136 37 12 chr10 13089609 13089690 -132499598 - MER105 DNA DNA -1 203 121 841 161 6 31 chr10 13089808 13089969 -132499319 + AluJb SINE Alu 126 282 -30 215 224 0 0 chr10 13089975 13090024 -132499264 + GA-rich Low_complexity Low_complexity 3 51 0 2190 125 3 0 chr10 13090146 13090442 -132498846 + AluSq SINE Alu 1 297 -16 186 350 10 20 chr10 13090916 13091016 -132498272 + MIR SINE MIR 164 262 0 193 269 0 0 chr10 13091159 13091211 -132498077 - L2 LINE L2 -218 3054 3003 3691 132 9 0 chr10 13091286 13091810 -132497478 - MER1A DNA MER1_type 0 529 1 414 316 35 12 chr10 13091850 13092021 -132497267 - L2 LINE L2 -1289 2025 1851 712 202 34 51 chr10 13092021 13092199 -132497089 + MER63B DNA MER1_type 1 175 -261 1407 209 16 32 chr10 13092568 13092775 -132496513 - MER82 DNA MER2_type -145 508 306 2421 111 16 14 chr10 13092775 13093146 -132496142 + THE1C LTR MaLR 1 372 -3 1407 209 16 32 chr10 13093146 13093253 -132496035 - MER82 DNA MER2_type -347 306 199 7143 122 12 35 chr10 13093255 13094354 -132494934 + HSMAR2 DNA Mariner 3 1077 -225 2142 90 21 0 chr10 13094354 13094643 -132494645 + AluSc SINE Alu 1 295 -14 7143 122 12 35 chr10 13094643 13094687 -132494601 + HSMAR2 DNA Mariner 1077 1120 -182 2062 127 0 0 chr10 13095189 13095496 -132493792 - AluSx SINE Alu 0 307 1 2116 82 7 41 chr10 13095637 13095954 -132493334 - AluSq SINE Alu 0 307 1 310 183 42 28 chr10 13096377 13096448 -132492840 - L1MC3 LINE L1 -607 7178 7107 357 110 0 122 chr10 13096604 13096656 -132492632 - MLT2C2 LTR ERVL -8 456 416 528 56 0 0 chr10 13096656 13096728 -132492560 + (TCTA)n Simple_repeat Simple_repeat 3 74 0 357 110 0 122 chr10 13096728 13096757 -132492531 - MLT2C2 LTR ERVL -48 416 385 215 61 30 0 chr10 13096767 13096800 -132492488 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 462 308 30 21 chr10 13096802 13097036 -132492252 - HAL1 LINE L1 -864 1643 1408 418 72 78 24 chr10 13097125 13097291 -132491997 + (TA)n Simple_repeat Simple_repeat 1 175 0 462 73 104 9 chr10 13097310 13097736 -132491552 + (TA)n Simple_repeat Simple_repeat 1 466 0 377 300 52 47 chr10 13097867 13097928 -132491360 - MIR SINE MIR -56 206 147 1863 170 0 0 chr10 13097928 13098228 -132491060 - AluJo SINE Alu -12 300 1 377 300 52 47 chr10 13098228 13098359 -132490929 - MIR SINE MIR -115 147 16 2071 122 7 0 chr10 13098573 13098867 -132490421 - AluSx SINE Alu -11 301 6 198 0 0 0 chr10 13099784 13099806 -132489482 + (C)n Simple_repeat Simple_repeat 1 22 0 182 257 9 0 chr10 13100253 13100358 -132488930 + (CA)n Simple_repeat Simple_repeat 2 107 0 469 235 6 6 chr10 13100425 13100595 -132488693 + (CA)n Simple_repeat Simple_repeat 2 171 0 492 297 46 14 chr10 13101722 13101941 -132487347 - MIR SINE MIR -1 261 36 1545 112 9 9 chr10 13102251 13102475 -132486813 + AluSq SINE Alu 1 224 -89 511 289 129 4 chr10 13103546 13103778 -132485510 - MIR SINE MIR 0 262 2 2215 99 3 13 chr10 13104188 13104491 -132484797 - AluSc SINE Alu -9 300 1 2133 130 0 0 chr10 13104578 13104877 -132484411 + AluSx SINE Alu 1 299 -13 458 71 0 192 chr10 13105284 13105383 -132483905 + MADE1 DNA Mariner 1 80 0 5624 150 12 2 chr10 13105610 13107312 -132481976 - L1PB1 LINE L1 -161 5990 4270 764 114 9 9 chr10 13107514 13107628 -132481660 + FLAM_C SINE Alu 2 115 -18 2285 94 7 0 chr10 13108159 13108456 -132480832 - AluSc SINE Alu -10 299 1 1520 166 43 17 chr10 13109117 13109418 -132479870 + AluJo SINE Alu 1 309 -3 536 229 92 52 chr10 13109778 13110166 -132479122 + L1M4 LINE L1 4211 4582 -1564 1641 163 45 0 chr10 13110166 13110454 -132478834 + AluSq SINE Alu 1 301 -12 536 229 92 52 chr10 13110454 13110680 -132478608 + L1M4 LINE L1 4582 4798 -1348 2152 119 0 7 chr10 13110680 13110974 -132478314 + AluSx SINE Alu 1 292 -20 536 229 92 52 chr10 13110974 13111124 -132478164 + L1M4 LINE L1 4798 5192 -954 2374 94 0 3 chr10 13111136 13111445 -132477843 + AluSg SINE Alu 1 308 -2 1139 187 113 14 chr10 13111451 13111734 -132477554 - L1ME LINE L1 -426 5740 5430 427 182 26 0 chr10 13111782 13111859 -132477429 - L1MC2 LINE L1 -32 6312 6234 365 138 0 0 chr10 13112627 13112685 -132476603 + MER53 DNA DNA 9 66 -123 231 170 64 0 chr10 13113411 13113458 -132475830 - L2 LINE L2 0 3272 3223 378 282 147 6 chr10 13113735 13113898 -132475390 + MER5A DNA MER1_type 4 189 0 464 303 27 21 chr10 13113906 13114094 -132475194 - MER5A DNA MER1_type 0 189 1 189 0 0 0 chr10 13115125 13115146 -132474142 + (A)n Simple_repeat Simple_repeat 1 21 0 432 248 30 15 chr10 13115181 13115314 -132473974 + HAL1 LINE L1 2036 2170 -337 238 250 43 11 chr10 13115349 13115441 -132473847 + HAL1 LINE L1 2245 2339 -168 2440 92 3 0 chr10 13115450 13115754 -132473534 + AluSx SINE Alu 1 305 -7 1977 269 105 3 chr10 13115943 13116627 -132472661 + L2 LINE L2 2216 2969 -345 2226 101 0 3 chr10 13116631 13116954 -132472334 - AluSq SINE Alu 0 313 1 554 117 11 21 chr10 13117425 13117519 -132471769 - FRAM SINE Alu -10 166 74 1633 134 4 4 chr10 13118097 13118335 -132470953 + AluSx SINE Alu 30 267 -45 2129 31 15 11 chr10 13118339 13118600 -132470688 + L1PA5 LINE L1 5893 6154 0 247 303 44 3 chr10 13118959 13119093 -132470195 + MIR SINE MIR 57 201 -7 216 234 125 0 chr10 13119753 13119817 -132469471 - MIR SINE MIR -79 183 112 2420 73 3 13 chr10 13119881 13120194 -132469094 - AluY SINE Alu -1 310 1 1347 239 30 18 chr10 13121855 13122218 -132467070 + LTR10C LTR ERV1 188 479 -26 283 133 0 0 chr10 13122457 13122502 -132466786 + L2 LINE L2 3226 3270 -2 379 254 85 38 chr10 13122782 13123019 -132466269 - L2 LINE L2 -290 3023 2764 2094 128 7 0 chr10 13123212 13123516 -132465772 - AluSg SINE Alu -4 306 1 199 280 43 21 chr10 13123692 13123785 -132465503 + L3 LINE CR1 1065 1159 -418 1910 145 0 7 chr10 13124083 13124380 -132464908 - AluJo SINE Alu -17 295 1 315 237 41 62 chr10 13125045 13125142 -132464146 - HAL1 LINE L1 -1 2506 2412 305 297 51 0 chr10 13126301 13126419 -132462869 + MIR SINE MIR 57 180 -82 2130 138 0 0 chr10 13126797 13127095 -132462193 + AluSx SINE Alu 1 298 -14 2840 226 62 35 chr10 13127378 13128342 -132460946 - L1ME1 LINE L1 -5 6161 5170 1820 210 32 22 chr10 13128333 13128400 -132460888 - L1MB8 LINE L1 -1 6177 6112 * 2218 98 7 3 chr10 13128400 13128695 -132460593 - AluSq SINE Alu -17 296 1 1820 210 32 22 chr10 13128695 13129088 -132460200 - L1MB8 LINE L1 -66 6112 5712 208 283 170 9 chr10 13132018 13132124 -132457164 + L2 LINE L2 3142 3264 -8 1478 205 27 27 chr10 13132598 13132969 -132456319 + MER93b LTR ERV1 1 371 -2 720 186 161 12 chr10 13133263 13133424 -132455864 - MER45C DNA AcHobo 0 953 769 321 26 0 0 chr10 13134762 13134800 -132454488 + (CA)n Simple_repeat Simple_repeat 2 39 0 2139 104 3 0 chr10 13134954 13135253 -132454035 + AluY SINE Alu 3 302 -9 223 333 130 34 chr10 13135887 13136094 -132453194 - L2 LINE L2 -3 3269 3043 1838 127 36 7 chr10 13136931 13137239 -132452049 + AluSx SINE Alu 1 316 0 508 173 19 10 chr10 13137769 13137873 -132451415 + FLAM_C SINE Alu 4 108 -35 281 244 355 23 chr10 13138097 13138269 -132451019 - MIR SINE MIR -33 229 1 1944 113 0 20 chr10 13139235 13139537 -132449751 - AluSx SINE Alu -16 296 1 183 80 0 0 chr10 13140278 13140303 -132448985 + (TG)n Simple_repeat Simple_repeat 1 25 0 295 293 130 51 chr10 13140647 13140826 -132448462 - L2 LINE L2 -5 3308 3108 1562 166 32 7 chr10 13140826 13141104 -132448184 + AluJo SINE Alu 1 285 -27 295 293 130 51 chr10 13141104 13141139 -132448149 - L2 LINE L2 -205 3108 3077 3297 154 11 9 chr10 13141622 13142186 -132447102 - L1PB4 LINE L1 0 6156 5592 340 106 0 61 chr10 13142459 13142525 -132446763 - Alu SINE Alu -1 299 238 374 77 0 0 chr10 13142656 13142708 -132446580 + Alu SINE Alu 248 299 -1 2340 134 64 43 chr10 13143038 13143457 -132445831 - MSTC LTR MaLR 0 428 1 656 283 23 12 chr10 13144972 13145145 -132444143 + MER5B DNA MER1_type 1 175 -3 1985 167 123 5 chr10 13145146 13145529 -132443759 - MSTA LTR MaLR 0 428 1 384 316 81 0 chr10 13146116 13146252 -132443036 - MIR3 SINE MIR -6 202 56 1376 160 0 13 chr10 13146387 13146618 -132442670 + AluJb SINE Alu 78 305 -7 239 343 59 10 chr10 13147021 13147123 -132442165 - MIR SINE MIR -64 144 38 2191 86 0 0 chr10 13147246 13147526 -132441762 + AluSc SINE Alu 1 280 -29 279 0 0 0 chr10 13147529 13147560 -132441728 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 503 157 139 0 chr10 13147615 13147730 -132441558 + MER105 DNA DNA 17 147 -57 2196 106 7 0 chr10 13148032 13148335 -132440953 + AluSq SINE Alu 1 305 -8 1875 122 10 22 chr10 13148342 13148653 -132440635 + AluSg SINE Alu 3 309 -1 509 333 30 14 chr10 13148771 13149011 -132440277 - MIR SINE MIR -2 260 18 260 306 37 37 chr10 13150013 13150121 -132439167 + MLT1K LTR MaLR 481 588 0 3059 140 32 45 chr10 13151298 13151580 -132437708 - MER1A DNA MER1_type -2173 527 254 2026 137 0 0 chr10 13151580 13151879 -132437409 - AluSx SINE Alu -13 299 1 3059 140 32 45 chr10 13151879 13152130 -132437158 - MER1A DNA MER1_type -2446 254 1 2095 116 0 3 chr10 13152179 13152490 -132436798 + AluSg SINE Alu 1 310 0 401 305 34 99 chr10 13152861 13153123 -132436165 - L3 LINE CR1 -863 714 470 217 236 109 0 chr10 13153130 13153185 -132436103 - L2 LINE L2 -4 3268 3208 1997 133 3 0 chr10 13153408 13153717 -132435571 - AluSx SINE Alu -2 310 1 1803 168 13 7 chr10 13153830 13154140 -132435148 - AluJb SINE Alu 0 312 1 390 148 0 0 chr10 13154211 13154272 -132435016 + AluS SINE Alu 1 61 -247 1821 85 4 31 chr10 13154578 13154836 -132434452 - AluSc SINE Alu -58 251 1 1146 161 57 0 chr10 13155200 13155411 -132433877 - L1PB4 LINE L1 0 6156 5934 1789 115 3 49 chr10 13155510 13155814 -132433474 + AluSx SINE Alu 7 296 -16 472 303 29 111 chr10 13156034 13156377 -132432911 + L2 LINE L2 2957 3271 -1 773 196 25 6 chr10 13156384 13156547 -132432741 + FRAM SINE Alu 1 166 0 684 0 0 0 chr10 13156673 13156749 -132432539 + (CTTAT)n Simple_repeat Simple_repeat 5 80 0 1684 151 22 7 chr10 13156754 13157032 -132432256 - AluSx SINE Alu -30 282 1 374 0 22 0 chr10 13157086 13157132 -132432156 + (TTCA)n Simple_repeat Simple_repeat 2 48 0 1306 127 25 118 chr10 13157906 13158221 -132431067 + AluYb8 SINE Alu 1 286 -32 428 0 19 0 chr10 13158222 13158274 -132431014 + (CAAA)n Simple_repeat Simple_repeat 2 54 0 204 40 0 0 chr10 13158331 13158356 -132430932 + (T)n Simple_repeat Simple_repeat 1 25 0 798 156 0 84 chr10 13158894 13159048 -132430240 - FRAM SINE Alu -42 134 1 1002 232 119 55 chr10 13159738 13160173 -132429115 + MLT2B1 LTR ERVL 2 464 -56 1653 151 0 70 chr10 13160178 13160490 -132428798 + AluJo SINE Alu 6 295 -17 2028 107 0 3 chr10 13160490 13160778 -132428510 + AluSc SINE Alu 19 306 -3 231 156 44 0 chr10 13160813 13160858 -132428430 + MLT2B1 LTR ERVL 462 508 -12 251 252 36 63 chr10 13160956 13161067 -132428221 - MIR3 SINE MIR -32 176 69 1955 60 0 4 chr10 13161421 13161672 -132427616 - AluY SINE Alu -14 297 48 2175 110 0 3 chr10 13161897 13162206 -132427082 + AluSq SINE Alu 1 308 -5 1916 75 11 19 chr10 13162490 13162757 -132426531 + AluY SINE Alu 10 274 -37 1198 153 13 55 chr10 13162898 13163134 -132426154 - AluJo SINE Alu -13 299 74 353 231 74 116 chr10 13163646 13163767 -132425521 + MER5B DNA MER1_type 63 178 0 237 291 23 0 chr10 13164931 13165017 -132424271 - L1MC4 LINE L1 -1341 6701 6614 * 282 233 0 47 chr10 13164941 13165027 -132424261 + L1MC4 LINE L1 6614 6695 -1347 282 56 0 0 chr10 13165027 13165063 -132424225 + (TG)n Simple_repeat Simple_repeat 2 37 0 193 214 0 29 chr10 13165079 13165149 -132424139 + (CATATA)n Simple_repeat Simple_repeat 3 70 0 1709 131 0 40 chr10 13165174 13165471 -132423817 - AluJb SINE Alu -27 285 1 1659 162 3 29 chr10 13166375 13166683 -132422605 - AluJo SINE Alu -12 300 1 236 264 14 14 chr10 13166700 13166772 -132422516 + L2 LINE L2 3239 3310 -3 410 271 50 9 chr10 13166894 13167023 -132422265 - MIR3 SINE MIR 0 208 74 1867 194 52 2 chr10 13167319 13167753 -132421535 + MER89 LTR ERV1 3 558 -1 2185 79 3 3 chr10 13167859 13168149 -132421139 - AluSg SINE Alu -20 290 1 247 295 0 0 chr10 13168825 13168886 -132420402 + MIR SINE MIR 185 245 -17 290 299 22 51 chr10 13169033 13169170 -132420118 + L2 LINE L2 2951 3083 -189 970 185 67 0 chr10 13169177 13169355 -132419933 - MER58A DNA MER1_type 0 224 35 2212 100 0 0 chr10 13169472 13169771 -132419517 + AluSq SINE Alu 9 307 -6 414 103 0 0 chr10 13169772 13169840 -132419448 + L1PB3 LINE L1 6080 6147 -7 1892 83 8 4 chr10 13170051 13170303 -132418985 + AluSx SINE Alu 1 253 -59 2239 105 0 0 chr10 13171216 13171520 -132417768 + AluSx SINE Alu 1 304 -8 887 213 5 35 chr10 13221756 13221958 -132367330 - AluJo SINE Alu -116 196 1 2017 111 0 97 chr10 13221987 13222123 -132367165 + AluSc SINE Alu 1 149 -160 2279 107 0 0 chr10 13222123 13222414 -132366874 + AluSg SINE Alu 1 291 -19 2017 111 0 97 chr10 13222414 13222619 -132366669 + AluSc SINE Alu 149 309 0 462 267 47 88 chr10 13222624 13222920 -132366368 + L2 LINE L2 3030 3313 0 2182 105 14 0 chr10 13223456 13223741 -132365547 - AluSx SINE Alu -16 296 8 1719 182 0 0 chr10 13223892 13224172 -132365116 + AluJb SINE Alu 1 280 -32 189 0 0 0 chr10 13224175 13224196 -132365092 + (GGGGA)n Simple_repeat Simple_repeat 2 22 0 234 0 0 0 chr10 13225674 13225700 -132363588 + (CGGA)n Simple_repeat Simple_repeat 3 28 0 396 59 0 0 chr10 13225702 13225753 -132363535 + (TAGA)n Simple_repeat Simple_repeat 3 53 0 911 185 212 79 chr10 13225947 13226098 -132363190 + MLT1A2 LTR MaLR 1 131 -243 2300 93 10 7 chr10 13226098 13226400 -132362888 + AluSc SINE Alu 1 303 -6 911 185 212 79 chr10 13226400 13226578 -132362710 + MLT1A2 LTR MaLR 131 374 0 2430 216 67 21 chr10 13226918 13227483 -132361805 + MLT1E LTR MaLR 1 591 -2 217 224 20 0 chr10 13227777 13227826 -132361462 + MER5B DNA MER1_type 128 177 -1 299 279 87 10 chr10 13228840 13228944 -132360344 - L2 LINE L2 -25 3247 3136 408 195 11 0 chr10 13229084 13229171 -132360117 + L1MB2 LINE L1 6068 6155 -16 696 186 103 44 chr10 13229501 13229705 -132359583 - L1MB7 LINE L1 -16 6168 5953 * 1164 178 84 41 chr10 13229681 13230024 -132359264 - L1M4 LINE L1 -4960 1582 1225 731 325 40 8 chr10 13230051 13230516 -132358772 - ERVL LTR ERVL -3486 2278 1732 1882 105 72 11 chr10 13230571 13230848 -132358440 - AluSx SINE Alu -18 294 1 380 269 9 19 chr10 13230848 13230956 -132358332 + MER94 DNA DNA 27 133 -1 241 222 19 0 chr10 13231119 13231173 -132358115 - MER5C DNA MER1_type -200 124 70 2160 129 0 3 chr10 13231463 13231758 -132357530 + AluSx SINE Alu 1 294 -18 204 321 0 0 chr10 13233279 13233332 -132355956 - MER5B DNA MER1_type -1 177 125 1398 93 0 0 chr10 13233657 13233829 -132355459 + AluSc SINE Alu 127 298 -11 219 69 0 0 chr10 13234093 13234122 -132355166 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 2001 153 0 0 chr10 13234124 13234406 -132354882 - AluSx SINE Alu -30 282 1 899 238 74 37 chr10 13234456 13234809 -132354479 + MLT1J LTR MaLR 102 467 -44 978 198 0 0 chr10 13234879 13235036 -132354252 + FRAM SINE Alu 1 157 -9 2763 99 59 0 chr10 13235037 13235441 -132353847 + MSTA LTR MaLR 1 428 0 2087 125 4 0 chr10 13235500 13235781 -132353507 + AluSq SINE Alu 1 282 -31 201 59 29 0 chr10 13235781 13235815 -132353473 + (CAAAA)n Simple_repeat Simple_repeat 1 180 0 644 266 107 29 chr10 13236316 13236891 -132352397 - L1MC5 LINE L1 -575 7386 6554 1051 231 197 41 chr10 13237160 13237590 -132351698 - L1MC4a LINE L1 -1582 6226 5670 2406 71 0 7 chr10 13237590 13237900 -132351388 - AluY SINE Alu -2 309 2 1051 231 197 41 chr10 13237900 13238083 -132351205 - L1MC4a LINE L1 -2138 5670 5517 2153 128 0 0 chr10 13238083 13238395 -132350893 - AluSx SINE Alu 0 312 1 2031 119 0 0 chr10 13238764 13239050 -132350238 + AluSg SINE Alu 1 286 -24 1453 232 50 86 chr10 13239381 13239536 -132349752 + L1ME3A LINE L1 5258 5417 -753 2461 50 0 3 chr10 13239536 13239835 -132349453 + AluSx SINE Alu 1 298 -14 1453 232 50 86 chr10 13239835 13240201 -132349087 + L1ME3A LINE L1 5417 5795 -375 762 244 76 10 chr10 13240201 13240398 -132348890 + MER63A DNA MER1_type 1 210 0 1453 232 50 86 chr10 13240398 13240448 -132348840 + L1ME3A LINE L1 5795 5845 -325 1861 169 0 7 chr10 13240448 13240755 -132348533 + AluJb SINE Alu 1 305 -7 1453 232 50 86 chr10 13240755 13240828 -132348460 + L1ME3A LINE L1 5845 5919 -251 1810 176 0 0 chr10 13240828 13241124 -132348164 + AluJb SINE Alu 1 296 -16 1453 232 50 86 chr10 13241124 13241157 -132348131 + L1ME3A LINE L1 5919 5914 -256 2270 102 0 0 chr10 13241157 13241462 -132347826 - AluSq SINE Alu -8 305 1 1453 232 50 86 chr10 13241462 13241500 -132347788 + L1ME3A LINE L1 5913 5951 -219 262 268 80 26 chr10 13241566 13241737 -132347551 + L1ME3A LINE L1 5963 6142 -28 816 235 7 0 chr10 13241772 13241925 -132347363 - MER63A DNA MER1_type -16 194 41 33958 67 8 7 chr10 13242754 13248057 -132341231 - L1PA6 LINE L1 0 6154 847 594 118 12 0 chr10 13248057 13248142 -132341146 - L1PA6 LINE L1 -6050 96 11 2086 97 20 0 chr10 13248151 13248451 -132340837 - AluSq SINE Alu -7 306 1 1081 148 0 101 chr10 13248700 13248909 -132340379 + MLT2B3 LTR ERVL 367 554 0 1620 137 22 11 chr10 13249995 13250265 -132339023 + AluJo SINE Alu 9 281 -31 1010 169 0 0 chr10 13250268 13250440 -132338848 - AluSg/x SINE Alu -5 307 136 2579 54 9 9 chr10 13250462 13250794 -132338494 + L1PA5 LINE L1 5814 6145 -9 201 200 20 0 chr10 13250794 13250844 -132338444 + (TA)n Simple_repeat Simple_repeat 2 52 0 2143 78 7 17 chr10 13250860 13251154 -132338134 + AluY SINE Alu 1 291 -20 1835 132 36 0 chr10 13251159 13251439 -132337849 + AluSq SINE Alu 1 290 -23 2039 111 0 0 chr10 13251914 13252218 -132337070 - AluSc SINE Alu 0 304 1 288 0 0 0 chr10 13252562 13252594 -132336694 + (T)n Simple_repeat Simple_repeat 1 32 0 289 84 4 0 chr10 13253436 13253484 -132335804 - MLT2B1 LTR ERVL -8 507 464 1811 138 7 10 chr10 13253528 13253825 -132335463 - AluJo SINE Alu -16 296 1 1987 223 58 19 chr10 13253836 13254298 -132334990 - MLT2B1 LTR ERVL -40 480 1 644 263 67 5 chr10 13254319 13254513 -132334775 + MER63A DNA MER1_type 3 208 -2 195 69 0 0 chr10 13254627 13254656 -132334632 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 2098 119 0 10 chr10 13254668 13254978 -132334310 - AluSx SINE Alu -5 307 1 345 230 0 0 chr10 13254981 13255055 -132334233 - AluJ/FRAM SINE Alu -6 296 223 435 209 63 89 chr10 13255055 13255213 -132334075 + MER51B LTR ERV1 1 154 -223 1202 157 190 15 chr10 13255215 13255483 -132333805 + MER51B LTR ERV1 63 377 0 1546 133 0 0 chr10 13255483 13255709 -132333579 - AluSx SINE Alu -86 226 1 548 285 14 14 chr10 13255849 13255993 -132333295 - MIR3 SINE MIR -25 183 40 366 23 0 0 chr10 13255995 13256038 -132333250 + (TG)n Simple_repeat Simple_repeat 2 44 0 281 235 37 12 chr10 13257321 13257402 -132331886 + MLT1K LTR MaLR 502 584 -4 462 265 32 70 chr10 13257865 13258050 -132331238 + MIR SINE MIR 29 206 -56 24 0 0 0 chr10 13258490 13258514 -132330774 + AT_rich Low_complexity Low_complexity 1 24 0 2400 116 8 8 chr10 13258537 13258892 -132330396 + THE1A LTR MaLR 1 355 0 1591 177 13 29 chr10 13259064 13259375 -132329913 + AluJo SINE Alu 1 306 -6 256 235 2 0 chr10 13259892 13259946 -132329342 + MIR SINE MIR 40 94 -114 1391 207 31 63 chr10 13259962 13260344 -132328944 + MLT1A2 LTR MaLR 5 374 0 228 330 97 0 chr10 13260353 13260456 -132328832 - MIR SINE MIR -42 220 108 694 240 38 36 chr10 13260497 13260717 -132328571 + L1ME1 LINE L1 5944 6157 -9 378 260 9 110 chr10 13260737 13260933 -132328355 + MIR SINE MIR 6 180 -65 271 237 0 53 chr10 13260962 13261038 -132328250 - L2 LINE L2 0 3272 3201 523 143 0 0 chr10 13261081 13261158 -132328130 + FLAM SINE Alu 42 118 -25 360 0 0 0 chr10 13261161 13261201 -132328087 + (CA)n Simple_repeat Simple_repeat 2 41 0 181 286 0 0 chr10 13261217 13261259 -132328029 - L2 LINE L2 -79 3234 3193 2267 132 5 24 chr10 13261289 13261668 -132327620 - L1PA13 LINE L1 0 6163 5792 449 306 133 34 chr10 13261668 13261991 -132327297 - L2 LINE L2 -109 3204 2850 984 308 74 2 chr10 13262071 13262464 -132326824 - L2 LINE L2 -654 2660 2240 2033 116 0 17 chr10 13263209 13263510 -132325778 + AluJb SINE Alu 1 296 -16 219 359 58 0 chr10 13264560 13264663 -132324625 - MIR3 SINE MIR -50 158 50 2197 93 3 0 chr10 13265749 13266049 -132323239 + AluSc SINE Alu 1 301 -8 708 225 50 11 chr10 13266628 13266810 -132322478 - MER5A DNA MER1_type 0 189 1 615 214 193 32 chr10 13267658 13267845 -132321443 - MER20 DNA MER1_type -2 217 1 2422 80 0 0 chr10 13268242 13268555 -132320733 + AluSq SINE Alu 1 313 0 1956 130 3 0 chr10 13268984 13269268 -132320020 + AluSx SINE Alu 7 291 -21 891 172 240 9 chr10 13269414 13269635 -132319653 - MER31B LTR ERV1 0 466 195 457 258 76 15 chr10 13269641 13269773 -132319515 + MER31B LTR ERV1 35 174 -292 997 205 57 28 chr10 13269778 13270064 -132319224 - LTR9 LTR ERV1 0 612 324 2200 79 3 23 chr10 13270123 13270427 -132318861 - AluSp SINE Alu -5 308 11 305 209 0 30 chr10 13270462 13270529 -132318759 - LTR9 LTR ERV1 -299 313 249 * 382 78 0 16 chr10 13270527 13270591 -132318697 - AluSc SINE Alu 0 299 237 * 1227 150 7 113 chr10 13270590 13270864 -132318424 - LTR9 LTR ERV1 -367 245 1 246 234 27 99 chr10 13270864 13270918 -132318370 + MER31B LTR ERV1 192 237 -229 587 186 64 75 chr10 13270919 13271107 -132318181 - MER31B LTR ERV1 -278 188 3 224 291 187 30 chr10 13271139 13271273 -132318015 + MER5B DNA MER1_type 23 177 -1 3655 92 40 84 chr10 13271297 13271334 -132317954 - MER4A LTR ERV1 0 600 563 2197 92 3 0 chr10 13271334 13271638 -132317650 - AluSq SINE Alu -3 310 6 3655 92 40 84 chr10 13271638 13272031 -132317257 - MER4A LTR ERV1 -37 563 154 189 0 0 0 chr10 13272031 13272052 -132317236 + (TTAG)n Simple_repeat Simple_repeat 2 22 0 2235 91 0 0 chr10 13272052 13272339 -132316949 - AluSp SINE Alu -26 287 1 3655 92 40 84 chr10 13272339 13272534 -132316754 - MER4A LTR ERV1 -444 156 1 211 196 20 39 chr10 13273625 13273676 -132315612 - L2 LINE L2 -13 3259 3210 722 226 113 5 chr10 13274651 13274837 -132314451 - L2 LINE L2 -1 3312 3107 1914 103 4 0 chr10 13275132 13275393 -132313895 - AluSq SINE Alu -48 265 4 2056 134 0 0 chr10 13275918 13276216 -132313072 + AluSx SINE Alu 1 298 -14 191 309 77 111 chr10 13277113 13277320 -132311968 + L2 LINE L2 2970 3169 -103 209 238 0 0 chr10 13277402 13277444 -132311844 - L2 LINE L2 -1 3271 3230 990 199 28 33 chr10 13277450 13277661 -132311627 + MER2 DNA MER2_type 1 210 -135 2007 103 3 20 chr10 13277777 13278077 -132311211 + AluSx SINE Alu 1 295 -17 825 267 142 69 chr10 13278174 13278779 -132310509 - L2 LINE L2 0 3313 2674 1916 177 18 9 chr10 13278779 13279113 -132310175 + MER1B DNA MER1_type 1 337 0 825 267 142 69 chr10 13279113 13279245 -132310043 - L2 LINE L2 -639 2674 2553 1288 289 143 29 chr10 13280092 13280463 -132308825 - L2 LINE L2 -645 2669 2342 2937 205 38 17 chr10 13280463 13281102 -132308186 + MER82 DNA MER2_type 1 652 -1 1288 289 143 29 chr10 13281102 13281388 -132307900 - L2 LINE L2 -972 2342 1937 2298 84 3 7 chr10 13281397 13281707 -132307581 - AluSp SINE Alu -4 309 1 1663 167 17 3 chr10 13282628 13282915 -132306373 + AluJo SINE Alu 1 291 -21 1795 145 13 13 chr10 13283457 13283760 -132305528 - AluJo SINE Alu -4 308 6 358 296 38 8 chr10 13284076 13284208 -132305080 - L3b LINE CR1 -241 1342 1207 245 295 29 87 chr10 13284301 13284474 -132304814 + MIR3 SINE MIR 41 203 -5 192 228 76 63 chr10 13284493 13284572 -132304716 + L3b LINE CR1 1250 1329 -254 2083 118 14 0 chr10 13285684 13285981 -132303307 - AluSx SINE Alu -11 301 1 27 29 0 0 chr10 13285991 13286025 -132303263 + AT_rich Low_complexity Low_complexity 1 34 0 2469 100 0 0 chr10 13287014 13287325 -132301963 - AluSx SINE Alu -1 311 1 2386 87 10 0 chr10 13288231 13288529 -132300759 - AluSq SINE Alu -12 301 1 934 181 12 0 chr10 13290580 13290746 -132298542 - FRAM SINE Alu -1 175 8 2208 138 0 0 chr10 13290873 13291185 -132298103 + AluSx SINE Alu 1 312 0 2048 84 0 0 chr10 13291749 13292000 -132297288 + AluSg SINE Alu 1 251 -59 604 140 9 9 chr10 13292209 13292316 -132296972 - FRAM SINE Alu -2 174 68 1253 77 38 6 chr10 13293177 13293360 -132295928 - MER30 DNA MER1_type -41 189 1 484 282 28 15 chr10 13293404 13293622 -132295666 + MIR3 SINE MIR 14 235 -27 388 226 34 89 chr10 13293659 13293805 -132295483 + MIR SINE MIR 69 206 -56 191 175 196 41 chr10 13294363 13294460 -132294828 + L2 LINE L2 3145 3256 -16 225 108 0 0 chr10 13294626 13294663 -132294625 + (CA)n Simple_repeat Simple_repeat 1 37 0 1751 171 0 46 chr10 13294739 13295043 -132294245 + AluJo SINE Alu 5 294 -18 3663 180 28 43 chr10 13295302 13296134 -132293154 - L1MB3 LINE L1 0 6183 5365 228 67 0 0 chr10 13296983 13297013 -132292275 + (CA)n Simple_repeat Simple_repeat 1 30 0 969 169 50 41 chr10 13297493 13297712 -132291576 - MLT1A2 LTR MaLR 0 374 154 235 239 0 0 chr10 13297707 13297753 -132291535 - MLT1L LTR MaLR -416 199 154 * 286 319 173 68 chr10 13297888 13298477 -132290811 - L2 LINE L2 -420 2894 2244 232 286 60 12 chr10 13298967 13299051 -132290237 + L2 LINE L2 3174 3261 -11 1706 129 55 80 chr10 13301211 13301522 -132287766 - AluJo SINE Alu -9 303 1 207 234 91 52 chr10 13302227 13302304 -132286984 + L3 LINE CR1 1161 1240 -337 * 417 295 113 82 chr10 13302302 13302621 -132286667 - L2 LINE L2 0 3272 2944 317 195 0 13 chr10 13303415 13303492 -132285796 + GA-rich Low_complexity Low_complexity 2 77 0 207 338 14 14 chr10 13304441 13304515 -132284773 - L2 LINE L2 -3 3269 3196 189 0 0 0 chr10 13305238 13305259 -132284029 + (TCCA)n Simple_repeat Simple_repeat 1 21 0 1103 111 0 6 chr10 13305259 13305439 -132283849 + (TCTA)n Simple_repeat Simple_repeat 2 180 0 778 182 8 4 chr10 13305439 13305689 -132283599 + (TCCA)n Simple_repeat Simple_repeat 1 251 0 201 111 93 37 chr10 13305678 13305786 -132283502 + (TCTA)n Simple_repeat Simple_repeat 4 117 0 * 266 326 36 8 chr10 13305838 13305967 -132283321 - MIR SINE MIR -76 132 42 24 32 0 0 chr10 13306145 13306176 -132283112 + AT_rich Low_complexity Low_complexity 1 31 0 2325 105 0 3 chr10 13306543 13306847 -132282441 - AluSg SINE Alu -7 303 1 303 269 113 56 chr10 13307081 13307241 -132282047 + MIR SINE MIR 92 260 -2 249 333 13 13 chr10 13307320 13307398 -132281890 + L2 LINE L2 3150 3227 -45 1938 77 109 0 chr10 13307438 13307708 -132281580 + AluSx SINE Alu 12 308 0 272 220 17 0 chr10 13307791 13307850 -132281438 + MIR3 SINE MIR 104 163 -45 1875 128 60 0 chr10 13308362 13308653 -132280635 + AluSx SINE Alu 1 307 0 2051 150 0 25 chr10 13308678 13308998 -132280290 + AluJo SINE Alu 1 312 0 2242 81 0 0 chr10 13309005 13309276 -132280012 + AluSc SINE Alu 1 271 -38 2341 100 7 0 chr10 13309381 13309682 -132279606 - AluSq SINE Alu -10 303 1 226 372 71 46 chr10 13309821 13310146 -132279142 - L2 LINE L2 -7 3265 2933 205 286 18 0 chr10 13310264 13310320 -132278968 + L2 LINE L2 3185 3241 -72 206 365 74 14 chr10 13311045 13311193 -132278095 + L2 LINE L2 2176 2332 -982 406 338 70 6 chr10 13312266 13312423 -132276865 + L2 LINE L2 3103 3269 -3 2035 129 33 3 chr10 13312517 13312820 -132276468 + AluSq SINE Alu 1 312 -1 2219 132 0 0 chr10 13312847 13313142 -132276146 + AluSx SINE Alu 1 295 -17 851 102 31 0 chr10 13313175 13313303 -132275985 - L1M2 LINE L1 -815 5476 5345 2767 161 57 40 chr10 13313333 13313884 -132275404 + L1MB1 LINE L1 5556 6119 -49 2053 126 13 10 chr10 13313884 13314193 -132275095 + AluJb SINE Alu 2 311 -1 2767 161 57 40 chr10 13314193 13314243 -132275045 + L1MB1 LINE L1 6119 6167 -1 2252 100 10 0 chr10 13314387 13314686 -132274602 - AluSq SINE Alu -11 302 1 2256 121 0 0 chr10 13316445 13316750 -132272538 + AluSx SINE Alu 1 305 -7 371 353 26 6 chr10 13316970 13317126 -132272162 - MIR3 SINE MIR 0 208 50 1819 127 3 85 chr10 13317860 13318200 -132271088 - AluSx SINE Alu 0 312 1 1801 136 35 49 chr10 13318534 13318880 -132270408 - MLT1A1 LTR MaLR 0 365 25 925 232 34 19 chr10 13319067 13319274 -132270014 - MIR SINE MIR 0 262 53 296 275 8 67 chr10 13319342 13319462 -132269826 + MIR SINE MIR 90 202 -60 252 206 16 32 chr10 13319914 13319977 -132269311 + L2 LINE L2 3203 3264 -8 2228 97 46 65 chr10 13320658 13320700 -132268588 - THE1B LTR MaLR 0 364 323 2418 91 7 10 chr10 13320700 13321009 -132268279 + AluSq SINE Alu 1 308 -5 2228 97 46 65 chr10 13321009 13321337 -132267951 - THE1B LTR MaLR -41 323 1 472 333 41 31 chr10 13321605 13321800 -132267488 + MIR SINE MIR 61 257 -5 1954 103 29 7 chr10 13321800 13322095 -132267193 - AluSx SINE Alu 0 307 7 655 321 67 8 chr10 13322364 13322501 -132266787 - MIR SINE MIR -1 261 103 2260 114 0 0 chr10 13322501 13322800 -132266488 + AluSx SINE Alu 1 299 -13 655 321 67 8 chr10 13322800 13322902 -132266386 - MIR SINE MIR -159 103 8 288 316 103 40 chr10 13323533 13323707 -132265581 + MIR SINE MIR 21 205 -57 186 333 105 0 chr10 13324040 13324145 -132265143 - L2 LINE L2 -822 2492 2377 2041 85 62 0 chr10 13324176 13324434 -132264854 - AluSc SINE Alu -35 274 1 1722 155 48 30 chr10 13325123 13325459 -132263829 - MLT2D LTR ERVL -48 366 25 2324 109 3 0 chr10 13325805 13326108 -132263180 + AluSx SINE Alu 1 304 -8 374 119 194 0 chr10 13329237 13329304 -132259984 - MADE1 DNA Mariner 0 80 1 194 250 143 36 chr10 13329950 13329967 -132259321 - MIR SINE MIR -56 206 192 2222 120 3 3 chr10 13329967 13330267 -132259021 + AluSx SINE Alu 1 300 -12 194 250 143 36 chr10 13330267 13330333 -132258955 - MIR SINE MIR -70 192 114 440 209 41 12 chr10 13331253 13331425 -132257863 + CT-rich Low_complexity Low_complexity 4 180 0 883 88 0 62 chr10 13331425 13331617 -132257671 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 335 182 20 20 chr10 13331667 13331766 -132257522 + CT-rich Low_complexity Low_complexity 2 100 0 1660 149 39 4 chr10 13331777 13332032 -132257256 - AluJo SINE Alu -44 268 5 230 283 9 94 chr10 13332135 13332241 -132257047 + MIR SINE MIR 154 250 -12 2377 69 3 0 chr10 13332424 13332712 -132256576 + AluSq SINE Alu 11 299 -14 2363 87 0 7 chr10 13333508 13333808 -132255480 + AluSc SINE Alu 1 298 -11 508 216 18 0 chr10 13334539 13334650 -132254638 + MER81 DNA DNA 1 113 -1 315 0 0 0 chr10 13334961 13334996 -132254292 + (CA)n Simple_repeat Simple_repeat 2 36 0 2400 67 0 3 chr10 13336862 13337144 -132252144 + AluSc SINE Alu 5 285 -24 216 0 0 0 chr10 13337949 13337973 -132251315 + (A)n Simple_repeat Simple_repeat 1 24 0 1987 107 11 0 chr10 13340566 13340870 -132248418 + AluSg SINE Alu 1 307 0 320 303 136 80 chr10 13341136 13341298 -132247990 + MER91A DNA MER1_type 11 181 -15 183 139 0 0 chr10 13341738 13341774 -132247514 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 257 321 46 18 chr10 13342100 13342209 -132247079 - MIR SINE MIR -7 255 144 271 140 40 140 chr10 13342319 13342419 -132246869 - L2 LINE L2 -510 2804 2715 1989 90 0 8 chr10 13342689 13342995 -132246293 - AluSc SINE Alu 0 318 15 319 128 0 6 chr10 13342995 13343052 -132246236 - AluSc SINE Alu -268 40 1 1916 115 0 21 chr10 13343550 13343836 -132245452 + AluSg SINE Alu 1 280 -30 354 240 83 0 chr10 13344173 13344269 -132245019 - MER5A DNA MER1_type -77 112 9 340 239 125 0 chr10 13344287 13344375 -132244913 + MER5B DNA MER1_type 3 101 -77 277 277 20 40 chr10 13344539 13344640 -132244648 + L2 LINE L2 207 305 -3009 198 71 0 0 chr10 13344808 13344836 -132244452 + (ATTG)n Simple_repeat Simple_repeat 2 29 0 783 247 4 62 chr10 13344846 13344931 -132244357 - MIR SINE MIR -28 234 146 1800 151 26 7 chr10 13344931 13345050 -132244238 + AluJb SINE Alu 1 116 -196 441 0 0 0 chr10 13345050 13345099 -132244189 + (TAA)n Simple_repeat Simple_repeat 2 50 0 1800 151 26 7 chr10 13345099 13345284 -132244004 + AluJb SINE Alu 116 311 -1 783 247 4 62 chr10 13345284 13345371 -132243917 - MIR SINE MIR -116 146 75 663 208 174 94 chr10 13345371 13345732 -132243556 + MLT1B LTR MaLR 1 390 0 783 247 4 62 chr10 13345732 13345785 -132243503 - MIR SINE MIR -187 75 21 1297 229 64 101 chr10 13345927 13346511 -132242777 - MLT1F1 LTR MaLR -4 563 1 1967 122 3 10 chr10 13346891 13347187 -132242101 - AluSx SINE Alu -18 294 1 271 153 0 225 chr10 13347895 13347916 -132241372 - L2 LINE L2 -5 3308 3284 1807 139 0 17 chr10 13347916 13348203 -132241085 + AluJo SINE Alu 1 282 -30 191 36 36 0 chr10 13348206 13348234 -132241054 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1812 161 0 0 chr10 13348242 13348534 -132240754 + AluSx SINE Alu 1 292 -20 271 153 0 225 chr10 13348534 13348610 -132240678 - L2 LINE L2 -39 3274 3223 447 243 59 53 chr10 13348970 13349139 -132240149 + MIR3 SINE MIR 27 196 -12 391 220 60 44 chr10 13349557 13349739 -132239549 - Charlie7 DNA MER1_type 0 2612 2428 845 153 7 0 chr10 13349789 13349960 -132239328 - AluSg/x SINE Alu 0 310 154 463 253 22 51 chr10 13349962 13350044 -132239244 - Charlie7 DNA MER1_type -291 2321 2238 910 181 13 13 chr10 13350044 13350199 -132239089 - FRAM SINE Alu -7 159 5 463 253 22 51 chr10 13350199 13350294 -132238994 - Charlie7 DNA MER1_type -374 2238 2149 214 244 0 0 chr10 13350365 13350410 -132238878 + CT-rich Low_complexity Low_complexity 3 47 0 788 169 0 22 chr10 13350818 13350954 -132238334 - FLAM_A SINE Alu 0 133 1 531 243 176 0 chr10 13351367 13351515 -132237773 - MER5A DNA MER1_type 0 189 16 2224 105 3 0 chr10 13352220 13352525 -132236763 + AluSx SINE Alu 4 309 -3 436 182 252 7 chr10 13354391 13354534 -132234754 - MER5B DNA MER1_type 0 178 1 25 31 0 0 chr10 13354747 13354779 -132234509 + AT_rich Low_complexity Low_complexity 1 32 0 2338 48 0 14 chr10 13354781 13355073 -132234215 + AluY SINE Alu 1 288 -23 1991 113 45 39 chr10 13355214 13355549 -132233739 - THE1B LTR MaLR -27 337 1 395 77 0 0 chr10 13355707 13355759 -132233529 + MADE1 DNA Mariner 1 52 -28 505 308 42 51 chr10 13355787 13356024 -132233264 - MIR SINE MIR -26 236 2 773 141 15 0 chr10 13356691 13356826 -132232462 - L1MB2 LINE L1 -7 6164 6028 436 189 25 90 chr10 13356826 13356874 -132232414 - L1MB4 LINE L1 0 6180 6130 1625 157 48 3 chr10 13356874 13357168 -132232120 - AluJo SINE Alu -5 307 1 436 189 25 90 chr10 13357168 13357241 -132232047 - L1MB4 LINE L1 -50 6130 6067 217 301 97 21 chr10 13358484 13358577 -132230711 + L2 LINE L2 2875 2974 -339 216 298 77 29 chr10 13358824 13358928 -132230360 + L2 LINE L2 3148 3256 -16 580 149 0 0 chr10 13359836 13359923 -132229365 - 5S rRNA rRNA -31 90 4 494 302 152 34 chr10 13360567 13361008 -132228280 - L3 LINE CR1 -35 1542 1050 896 165 192 46 chr10 13361692 13362058 -132227230 + L1MEc LINE L1 2160 2555 -3660 646 235 122 51 chr10 13362256 13362651 -132226637 - L1MC5 LINE L1 -33 7928 7506 2145 109 0 0 chr10 13364130 13364424 -132224864 + AluSg SINE Alu 11 304 -6 824 250 33 9 chr10 13365749 13365961 -132223327 + MER20 DNA MER1_type 1 217 -2 2179 101 7 0 chr10 13366067 13366373 -132222915 + AluSx SINE Alu 1 308 -4 226 233 87 97 chr10 13366544 13366647 -132222641 + MLT2E LTR ERVL 32 133 -495 462 270 20 0 chr10 13367071 13367171 -132222117 - L1MC1 LINE L1 -23 6310 6209 * 647 222 66 14 chr10 13367160 13367372 -132221916 - L1MCa LINE L1 -1586 4840 4618 975 128 61 0 chr10 13367404 13367568 -132221720 - Tigger5 DNA MER2_type -62 2261 2088 259 143 24 0 chr10 13367565 13367607 -132221681 - Tigger5 DNA MER2_type -2229 94 52 * 6503 237 45 26 chr10 13367623 13368593 -132220695 - L1MCa LINE L1 -1810 4616 3666 1717 158 3 13 chr10 13368593 13368896 -132220392 - AluSx SINE Alu -12 300 1 6503 237 45 26 chr10 13368896 13369943 -132219345 - L1MCa LINE L1 -2760 3666 2575 687 187 32 0 chr10 13369944 13370067 -132219221 - FLAM_C SINE Alu -6 127 1 952 183 145 30 chr10 13370078 13370313 -132218975 - AluJo SINE Alu -47 265 4 280 146 21 0 chr10 13370317 13370365 -132218923 - L1MCa LINE L1 -4027 2580 2532 998 167 0 0 chr10 13370365 13370521 -132218767 - AluSg/x SINE Alu -20 292 137 1250 139 120 11 chr10 13370521 13370807 -132218481 - L1MCa LINE L1 -3934 2492 2176 1125 110 0 0 chr10 13370807 13370971 -132218317 - AluY SINE Alu -15 296 133 1688 145 157 15 chr10 13370972 13371488 -132217800 - L1MCa LINE L1 -4242 2184 1495 897 171 6 28 chr10 13371498 13371679 -132217609 - AluJb SINE Alu -14 298 122 334 83 0 0 chr10 13371679 13371727 -132217561 - L1MCa LINE L1 -4963 1463 1416 1351 202 93 39 chr10 13371737 13371787 -132217501 - L1MCa LINE L1 -5875 551 505 1220 182 84 67 chr10 13371787 13372084 -132217204 + AluJo SINE Alu 1 302 0 1351 202 93 39 chr10 13372084 13372389 -132216899 - L1MCa LINE L1 -5921 505 177 453 256 45 0 chr10 13372451 13372584 -132216704 + Charlie4 DNA MER1_type 70 208 -1753 803 159 0 7 chr10 13372602 13372740 -132216548 - FRAM SINE Alu -14 162 26 382 235 37 0 chr10 13372741 13372822 -132216466 + Charlie4 DNA MER1_type 1878 1961 0 341 313 222 22 chr10 13373027 13373576 -132215712 + L2 LINE L2 121 779 -2535 583 261 234 0 chr10 13373619 13373807 -132215481 + MIR SINE MIR 2 233 -29 181 267 81 58 chr10 13373931 13374017 -132215271 + L2 LINE L2 3226 3313 0 1302 155 188 4 chr10 13374487 13374732 -132214556 + AluSc SINE Alu 1 290 -9 180 0 0 0 chr10 13375368 13375388 -132213900 + (T)n Simple_repeat Simple_repeat 1 20 0 3703 104 45 0 chr10 13376103 13376632 -132212656 + MER41A LTR ERV1 2 554 0 925 224 41 25 chr10 13376897 13377240 -132212048 + MER34C LTR ERV1 59 450 -135 992 196 230 31 chr10 13377306 13377464 -132211824 + MER31-int LTR ERV1 877 1002 -3934 2429 186 35 69 chr10 13377464 13378098 -132211190 + LTR9 LTR ERV1 1 612 0 992 196 230 31 chr10 13378098 13378387 -132210901 + MER31-int LTR ERV1 1002 1413 -3523 596 107 0 62 chr10 13378387 13378499 -132210789 + MER4D LTR ERV1 2 106 -766 2231 203 101 55 chr10 13378499 13379084 -132210204 + LTR9 LTR ERV1 1 612 0 * 4772 131 38 16 chr10 13379084 13379835 -132209453 + MER4D LTR ERV1 103 870 -2 459 200 55 0 chr10 13380003 13380113 -132209175 + MER34 LTR ERV1 122 237 -305 336 179 15 15 chr10 13380113 13380180 -132209108 + MER34 LTR ERV1 476 542 0 546 237 63 80 chr10 13380325 13380807 -132208481 + MER57-int LTR ERV1 2102 3183 -1697 540 206 103 12 chr10 13380788 13380953 -132208335 + MER57-int LTR ERV1 2463 2642 -2294 * 1000 252 33 73 chr10 13381049 13381474 -132207814 + MER57-int LTR ERV1 6744 7151 -386 733 253 122 60 chr10 13381515 13381829 -132207459 + MER57A LTR ERV1 60 395 -8 2078 128 0 0 chr10 13382281 13382585 -132206703 - AluSx SINE Alu -8 304 1 268 227 57 68 chr10 13382587 13382675 -132206613 - L2 LINE L2 -1 3312 3226 377 255 154 72 chr10 13382940 13383148 -132206140 - MIR SINE MIR -18 244 20 2335 103 73 6 chr10 13383154 13383495 -132205793 + THE1B LTR MaLR 1 364 0 243 0 0 0 chr10 13383605 13383632 -132205656 + (CA)n Simple_repeat Simple_repeat 1 27 0 2211 51 4 0 chr10 13383866 13384140 -132205148 - AluY SINE Alu -8 303 29 1577 189 117 45 chr10 13384297 13384742 -132204546 + MLT1J LTR MaLR 35 511 0 1294 150 146 31 chr10 13386239 13386499 -132202789 + AluJo SINE Alu 1 290 -12 256 263 105 44 chr10 13386545 13386659 -132202629 - MER112 DNA MER1_type -17 243 123 2111 113 0 0 chr10 13386672 13386972 -132202316 + AluY SINE Alu 12 311 0 477 241 54 0 chr10 13387338 13387450 -132201838 + L2 LINE L2 3192 3309 -4 208 333 82 30 chr10 13387801 13387936 -132201352 + L2 LINE L2 2913 3054 -218 2339 105 51 20 chr10 13388174 13388526 -132200762 - THE1B LTR MaLR -1 363 1 1095 213 84 24 chr10 13388984 13389280 -132200008 - MER58B DNA MER1_type 0 341 28 2649 125 56 0 chr10 13389543 13389951 -132199337 - MSTB1 LTR MaLR -1 431 1 967 186 0 0 chr10 13390700 13390861 -132198427 - FRAM SINE Alu -5 161 1 1666 124 132 0 chr10 13390886 13391152 -132198136 - AluSx SINE Alu -1 301 1 882 109 0 31 chr10 13391160 13391288 -132198000 - FLAM_C SINE Alu -9 124 1 268 195 123 159 chr10 13391591 13391786 -132197502 + MLT1L LTR MaLR 39 226 -389 564 108 0 0 chr10 13391793 13391867 -132197421 + MER31B LTR ERV1 3 76 -390 2095 223 54 56 chr10 13391921 13392550 -132196738 + MER67B LTR ERV1 34 661 0 2236 175 18 48 chr10 13392623 13392978 -132196310 + MSTA LTR MaLR 2 343 -85 1853 111 68 7 chr10 13392978 13393258 -132196030 - AluSx SINE Alu -2 310 14 2236 175 18 48 chr10 13393258 13393342 -132195946 + MSTA LTR MaLR 343 428 0 404 287 103 17 chr10 13393915 13394089 -132195199 - MLT1K LTR MaLR -244 344 156 2196 119 0 0 chr10 13394318 13394613 -132194675 - AluSx SINE Alu -17 295 1 376 328 0 0 chr10 13394784 13394912 -132194376 - MIR3 SINE MIR -16 192 65 2092 128 0 0 chr10 13395017 13395298 -132193990 + AluSx SINE Alu 1 281 -31 455 0 18 0 chr10 13395298 13395353 -132193935 + (CA)n Simple_repeat Simple_repeat 1 56 0 329 290 71 7 chr10 13396289 13396442 -132192846 + MIR SINE MIR 24 184 -62 2354 95 0 10 chr10 13397484 13397790 -132191498 + AluSc SINE Alu 1 303 -6 1944 127 17 10 chr10 13398741 13399040 -132190248 - AluSx SINE Alu -11 301 1 274 293 208 0 chr10 13399101 13399207 -132190081 + MLT1L LTR MaLR 124 251 -364 294 223 14 50 chr10 13399402 13399541 -132189747 + G-rich Low_complexity Low_complexity 4 137 0 306 237 13 122 chr10 13400256 13400359 -132188929 - MIR SINE MIR -11 251 169 1286 58 204 0 chr10 13400359 13400550 -132188738 + MER30 DNA MER1_type 1 230 0 306 237 13 122 chr10 13400550 13400602 -132188686 - MIR SINE MIR -93 169 113 277 362 0 0 chr10 13401381 13401486 -132187802 + MIR SINE MIR 47 151 -111 1777 108 0 49 chr10 13401488 13401793 -132187495 + AluSx SINE Alu 1 290 -22 308 236 100 9 chr10 13402424 13402534 -132186754 - MIR SINE MIR -30 232 113 560 237 60 84 chr10 13402685 13402934 -132186354 + MLT1J1 LTR MaLR 182 424 -22 2213 84 14 0 chr10 13403329 13403616 -132185672 + AluSg SINE Alu 1 291 -19 404 287 103 17 chr10 13403845 13404019 -132185269 + MLT1K LTR MaLR 156 344 -244 2295 182 19 21 chr10 13404592 13404664 -132184624 - MSTA LTR MaLR 0 428 357 1855 126 65 7 chr10 13404664 13404957 -132184331 + AluSx SINE Alu 1 310 -2 2295 182 19 21 chr10 13404957 13405312 -132183976 - MSTA LTR MaLR -71 357 2 2073 224 54 56 chr10 13405385 13406014 -132183274 - MER67B LTR ERV1 0 661 34 564 108 0 0 chr10 13406068 13406142 -132183146 - MER31B LTR ERV1 -390 76 3 268 195 123 159 chr10 13406149 13406344 -132182944 - MLT1L LTR MaLR -389 226 39 882 109 0 31 chr10 13406647 13406775 -132182513 + FLAM_C SINE Alu 1 124 -9 1666 124 132 0 chr10 13406783 13407049 -132182239 + AluSx SINE Alu 1 301 -1 967 186 0 0 chr10 13407074 13407235 -132182053 + FRAM SINE Alu 1 161 -5 2649 125 56 0 chr10 13407984 13408392 -132180896 + MSTB1 LTR MaLR 1 431 -1 1109 209 84 24 chr10 13408655 13408951 -132180337 + MER58B DNA MER1_type 28 341 0 2333 105 51 20 chr10 13409409 13409761 -132179527 + THE1B LTR MaLR 1 363 -1 2622 128 12 22 chr10 13410293 13410707 -132178581 - MER4E LTR ERV1 -369 410 1 2867 128 27 15 chr10 13411004 13411482 -132177806 + LTR8 LTR ERV1 1 484 -207 363 269 8 15 chr10 13411530 13411664 -132177624 - LTR8 LTR ERV1 -27 664 532 2468 97 0 0 chr10 13413395 13413704 -132175584 - AluSg SINE Alu -1 309 1 1721 138 17 38 chr10 13413733 13414022 -132175266 - AluJo SINE Alu -15 297 15 1802 169 7 0 chr10 13415038 13415322 -132173966 + AluJo SINE Alu 1 286 -26 505 164 39 0 chr10 13415488 13415592 -132173696 + L1MB1 LINE L1 6061 6168 0 1955 136 7 14 chr10 13415605 13415884 -132173404 + AluSx SINE Alu 3 279 -33 528 16 0 0 chr10 13415884 13415945 -132173343 + (CA)n Simple_repeat Simple_repeat 1 61 0 234 200 0 20 chr10 13415946 13415996 -132173292 - Charlie7 DNA MER1_type -2525 87 39 1834 154 48 3 chr10 13416232 13416524 -132172764 + AluJo SINE Alu 1 305 -7 1750 126 15 4 chr10 13416826 13417119 -132172169 + AluSq SINE Alu 19 314 0 27 81 0 0 chr10 13417940 13418002 -132171286 + AT_rich Low_complexity Low_complexity 1 62 0 243 61 0 0 chr10 13418054 13418087 -132171201 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 189 74 0 0 chr10 13418843 13418870 -132170418 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2127 112 14 0 chr10 13418873 13419151 -132170137 - AluSx SINE Alu -30 282 1 445 37 0 0 chr10 13419600 13419654 -132169634 + MADE1 DNA Mariner 1 54 -26 403 119 30 0 chr10 13419649 13419716 -132169572 - MADE1 DNA Mariner -11 69 1 * 584 284 110 63 chr10 13420292 13420757 -132168531 - MLT1G1 LTR MaLR 0 595 20 548 273 103 70 chr10 13420761 13421091 -132168197 - MLT1G1-int LTR MaLR -3 1368 1028 375 373 3 24 chr10 13421753 13422040 -132167248 - MLT1G1-int LTR MaLR -827 544 264 347 258 45 0 chr10 13422104 13422193 -132167095 - MLT1G1 LTR MaLR 0 555 463 574 270 83 49 chr10 13422225 13422429 -132166859 - MLT1G1 LTR MaLR -175 420 210 2152 126 3 10 chr10 13422992 13423302 -132165986 + AluSx SINE Alu 3 310 -2 930 188 0 12 chr10 13424659 13424824 -132164464 + FRAM SINE Alu 4 166 0 315 263 51 51 chr10 13424837 13424974 -132164314 - MIR SINE MIR -48 214 78 2714 101 0 8 chr10 13425168 13425535 -132163753 + THE1B LTR MaLR 1 364 0 35021 59 2 3 chr10 13426348 13431595 -132157693 + L1PA5 LINE L1 912 6152 -2 1264 128 6 0 chr10 13431595 13431775 -132157513 + LTR10E LTR ERV1 453 633 0 733 248 78 9 chr10 13431817 13432035 -132157253 + LTR10E-int LTR ERV1 50 282 -6367 768 155 7 14 chr10 13432290 13432438 -132156850 + MER61-int LTR ERV1 1935 2081 -3136 2387 101 3 0 chr10 13432438 13432744 -132156544 + AluSp SINE Alu 1 307 -6 590 250 92 44 chr10 13432786 13433058 -132156230 + MLT1L LTR MaLR 321 605 -10 227 257 81 0 chr10 13433068 13433142 -132156146 - MIR SINE MIR -112 150 71 696 248 103 92 chr10 13433197 13433730 -132155558 + MER34 LTR ERV1 1 539 -3 3604 251 77 23 chr10 13435541 13436238 -132153050 + L1M3c LINE L1 2136 2794 -4771 2214 121 0 0 chr10 13436238 13436535 -132152753 + AluSg SINE Alu 1 297 -13 297 51 0 0 chr10 13436536 13436575 -132152713 + (CA)n Simple_repeat Simple_repeat 2 40 0 3604 251 77 23 chr10 13436575 13437399 -132151889 + L1M3c LINE L1 2793 3602 -3963 2024 144 29 41 chr10 13437397 13438024 -132151264 + L1MA7 LINE L1 5231 5819 -493 * 70 13 0 0 chr10 13438031 13438108 -132151180 + AT_rich Low_complexity Low_complexity 1 77 0 1028 125 0 24 chr10 13438110 13438278 -132151010 + L1MA7 LINE L1 5803 5966 -325 512 261 8 0 chr10 13438510 13438629 -132150659 + L1MA7 LINE L1 5980 6099 -192 349 167 222 0 chr10 13438679 13438751 -132150537 + Tigger5 DNA MER2_type 2234 2321 -2 936 150 44 0 chr10 13438751 13438931 -132150357 + L1MA8 LINE L1 6101 6288 -3 2145 98 7 36 chr10 13438946 13439253 -132150035 + AluSx SINE Alu 1 298 -14 2225 106 0 10 chr10 13440034 13440336 -132148952 - AluSg SINE Alu -11 299 1 2032 127 3 3 chr10 13440883 13441193 -132148095 + AluSq SINE Alu 1 310 0 248 255 163 1 chr10 13441241 13441369 -132147919 + MIR SINE MIR 8 152 -56 202 333 0 0 chr10 13441427 13441493 -132147795 - L2 LINE L2 -18 3254 3189 182 295 121 68 chr10 13443230 13443420 -132145868 - MIR SINE MIR -7 255 56 228 67 0 0 chr10 13444634 13444664 -132144624 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 994 190 39 0 chr10 13445051 13445230 -132144058 + L1MC1 LINE L1 5992 6177 -156 2187 135 0 3 chr10 13445341 13445652 -132143636 + AluSx SINE Alu 1 310 -2 242 116 23 0 chr10 13445654 13445697 -132143591 + GA-rich Low_complexity Low_complexity 1 44 0 2254 110 7 7 chr10 13446369 13446668 -132142620 - AluSx SINE Alu -13 299 1 207 0 0 0 chr10 13446900 13446923 -132142365 + (GA)n Simple_repeat Simple_repeat 2 24 0 455 213 9 9 chr10 13447223 13447331 -132141957 + MER4A LTR ERV1 1 108 -556 538 166 74 162 chr10 13447416 13447645 -132141643 + MER4A LTR ERV1 140 348 -316 519 183 50 124 chr10 13447678 13447745 -132141543 + MER4C LTR ERV1 275 345 -120 1597 170 76 0 chr10 13447745 13448021 -132141267 - AluJo SINE Alu -15 297 1 519 183 50 124 chr10 13448021 13448155 -132141133 + MER4C LTR ERV1 345 461 -4 279 246 14 0 chr10 13448404 13448473 -132140815 + MIR3 SINE MIR 135 204 -4 840 167 0 0 chr10 13449389 13449521 -132139767 - FLAM_C SINE Alu -1 132 1 2146 113 10 19 chr10 13449526 13449837 -132139451 - AluSq SINE Alu -5 308 1 2358 101 7 3 chr10 13450194 13450501 -132138787 + AluSc SINE Alu 1 308 -1 1462 174 80 27 chr10 13450506 13450853 -132138435 + L1MB1 LINE L1 5799 6168 0 2442 101 3 0 chr10 13450861 13451167 -132138121 + AluSx SINE Alu 1 307 -5 1747 163 34 0 chr10 13451179 13451473 -132137815 + AluSx SINE Alu 2 305 -7 198 0 0 0 chr10 13451476 13451498 -132137790 + (TA)n Simple_repeat Simple_repeat 1 22 0 1977 161 6 0 chr10 13451614 13451925 -132137363 + AluSq SINE Alu 1 313 0 654 159 38 6 chr10 13451976 13452120 -132137168 + L1MD2 LINE L1 5293 5440 -730 2153 134 7 3 chr10 13452120 13452426 -132136862 + AluSx SINE Alu 1 307 -5 4282 175 28 17 chr10 13452431 13453355 -132135933 + L1MB7 LINE L1 5193 6125 -59 3045 203 62 7 chr10 13453521 13454197 -132135091 + L1MD2 LINE L1 5417 6129 -230 1591 60 0 15 chr10 13454198 13454398 -132134890 - AluY SINE Alu -11 300 104 285 118 88 29 chr10 13454467 13454535 -132134753 + MADE1 DNA Mariner 1 72 -8 939 218 23 39 chr10 13454548 13454805 -132134483 + L1MD2 LINE L1 6106 6358 -1 2536 68 3 0 chr10 13454817 13455127 -132134161 + AluY SINE Alu 1 311 0 613 320 120 29 chr10 13456168 13456678 -132132610 + L2 LINE L2 2525 3122 -191 2090 129 11 3 chr10 13456678 13456964 -132132324 - AluSx SINE Alu -20 292 5 613 320 120 29 chr10 13456964 13457170 -132132118 + L2 LINE L2 3122 3308 -5 233 57 29 0 chr10 13457716 13457751 -132131537 + (TTCA)n Simple_repeat Simple_repeat 3 38 0 2147 111 4 0 chr10 13457765 13458045 -132131243 - AluSx SINE Alu -31 281 1 4259 187 60 26 chr10 13458050 13458294 -132130994 + Charlie1a DNA MER1_type 47 281 -2480 2365 73 0 26 chr10 13458294 13458607 -132130681 + AluY SINE Alu 1 305 -6 4259 187 60 26 chr10 13458607 13459288 -132130000 + Charlie1a DNA MER1_type 281 1004 -451 2035 128 0 52 chr10 13459627 13459956 -132129332 - AluSx SINE Alu 0 312 1 270 246 162 7 chr10 13460280 13460422 -132128866 + L1MC4a LINE L1 5843 6006 -1802 2034 138 3 0 chr10 13460438 13460734 -132128554 + AluSx SINE Alu 9 305 -7 2547 113 11 5 chr10 13460750 13461129 -132128159 + L1PB1 LINE L1 5766 6146 -5 264 300 29 0 chr10 13461605 13461709 -132127579 - MIR SINE MIR -66 142 32 2048 129 0 0 chr10 13462442 13462745 -132126543 + AluSx SINE Alu 5 307 0 2307 112 0 3 chr10 13463114 13463418 -132125870 + AluSx SINE Alu 1 303 -9 2106 148 0 0 chr10 13463551 13463856 -132125432 - AluSx SINE Alu -7 305 1 2194 100 0 0 chr10 13464653 13464932 -132124356 - AluSx SINE Alu -15 297 19 2105 116 33 3 chr10 13465080 13465409 -132123879 + L1PA15 LINE L1 5827 6165 0 306 237 13 122 chr10 13466038 13466141 -132123147 - MIR SINE MIR -11 251 169 1286 58 204 0 chr10 13466141 13466332 -132122956 + MER30 DNA MER1_type 1 230 0 306 237 13 122 chr10 13466332 13466384 -132122904 - MIR SINE MIR -93 169 113 277 362 0 0 chr10 13467162 13467267 -132122021 + MIR SINE MIR 47 151 -111 2210 116 0 3 chr10 13467269 13467562 -132121726 + AluSx SINE Alu 1 292 -20 192 341 47 47 chr10 13469043 13469172 -132120116 - MIR SINE MIR -118 144 16 32 67 0 0 chr10 13469875 13469935 -132119353 + GC_rich Low_complexity Low_complexity 1 60 0 222 183 14 56 chr10 13470094 13470165 -132119123 + G-rich Low_complexity Low_complexity 5 72 0 1708 148 37 10 chr10 13470683 13470980 -132118308 - AluJb SINE Alu -3 309 5 1650 170 52 59 chr10 13471015 13471403 -132117885 - MLT1B LTR MaLR -2 388 4 776 269 26 4 chr10 13471537 13471764 -132117524 - MIR SINE MIR -24 238 7 8261 283 53 24 chr10 13472287 13474970 -132114318 - ERVL LTR ERVL -814 4950 2192 1278 285 109 44 chr10 13474978 13475686 -132113602 - ERVL LTR ERVL -3773 1881 1128 603 231 209 0 chr10 13476809 13476991 -132112297 + L1MC4 LINE L1 6460 6679 -1363 4551 203 93 26 chr10 13477049 13478270 -132111018 + L1ME1 LINE L1 3942 5346 -820 2256 122 0 0 chr10 13478270 13478574 -132110714 + AluSx SINE Alu 1 304 -8 4551 203 93 26 chr10 13478574 13479120 -132110168 + L1ME1 LINE L1 5346 5854 -312 2316 109 0 3 chr10 13479204 13479506 -132109782 + AluSg SINE Alu 1 301 -9 6387 158 18 15 chr10 13479512 13480900 -132108388 + L1PA13 LINE L1 4162 5546 -619 1017 114 0 0 chr10 13480950 13481090 -132108198 + AluSg/x SINE Alu 159 298 -14 600 177 8 16 chr10 13481091 13481215 -132108073 + L1PA13 LINE L1 6027 6149 -14 1808 207 106 61 chr10 13481425 13482174 -132107114 + L1MC4 LINE L1 6690 7404 -455 2209 126 3 0 chr10 13482174 13482476 -132106812 + AluSx SINE Alu 2 304 -8 2452 88 10 0 chr10 13482476 13482783 -132106505 + AluY SINE Alu 1 311 0 1808 207 106 61 chr10 13482783 13483060 -132106228 + L1MC4 LINE L1 7403 7858 -1 228 328 39 16 chr10 13483770 13483898 -132105390 - MIR SINE MIR -21 241 111 1591 134 17 10 chr10 13484111 13484402 -132104886 + L1MA2 LINE L1 6011 6303 -1 21 0 0 0 chr10 13484403 13484424 -132104864 + AT_rich Low_complexity Low_complexity 1 21 0 259 323 47 33 chr10 13484813 13484994 -132104294 - MIR3 SINE MIR -64 144 15 2355 122 0 0 chr10 13485537 13485849 -132103439 + AluSx SINE Alu 1 312 0 319 281 73 0 chr10 13486024 13486106 -132103182 - L2 LINE L2 -32 3281 3194 2085 125 0 20 chr10 13486952 13487255 -132102033 + AluSq SINE Alu 1 297 -16 2375 57 0 4 chr10 13487255 13487564 -132101724 + AluY SINE Alu 1 308 0 2064 113 3 3 chr10 13488017 13488331 -132100957 + AluSq SINE Alu 1 314 0 243 61 0 0 chr10 13489266 13489299 -132099989 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 1790 154 0 28 chr10 13490609 13490928 -132098360 - AluJb SINE Alu -2 310 1 315 177 0 0 chr10 13491545 13491607 -132097681 + (TG)n Simple_repeat Simple_repeat 2 63 0 2510 50 0 0 chr10 13491625 13491927 -132097361 + AluY SINE Alu 1 302 -9 244 125 62 0 chr10 13492067 13492115 -132097173 + L1MB7 LINE L1 6133 6183 -1 213 177 15 116 chr10 13492908 13493106 -132096182 + (CGGGG)n Simple_repeat Simple_repeat 2 179 0 * 477 216 28 44 chr10 13492966 13493147 -132096141 + G-rich Low_complexity Low_complexity 1 178 0 388 247 5 54 chr10 13493227 13493413 -132095875 + G-rich Low_complexity Low_complexity 1 177 0 268 177 44 35 chr10 13493357 13493470 -132095818 + (CGCGG)n Simple_repeat Simple_repeat 1 114 0 * 28 71 0 0 chr10 13493529 13493585 -132095703 + GC_rich Low_complexity Low_complexity 1 56 0 273 228 0 0 chr10 13493590 13493669 -132095619 + G-rich Low_complexity Low_complexity 5 83 0 315 222 56 0 chr10 13494433 13494505 -132094783 + L2 LINE L2 3219 3294 -19 1695 155 35 3 chr10 13494941 13495062 -132094226 + AluSx SINE Alu 4 120 -192 216 0 0 0 chr10 13495062 13495086 -132094202 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 1695 155 35 3 chr10 13495086 13495254 -132094034 + AluSx SINE Alu 120 302 -10 1206 137 0 6 chr10 13495456 13495631 -132093657 + MER41C LTR ERV1 1 174 -380 4545 90 9 26 chr10 13495633 13496100 -132093188 + LTR10E LTR ERV1 1 456 -177 10981 41 0 3 chr10 13496100 13498198 -132091090 + L1PA5 LINE L1 4058 6154 0 4545 90 9 26 chr10 13498198 13498374 -132090914 + LTR10E LTR ERV1 456 633 0 860 242 71 8 chr10 13498397 13498637 -132090651 + LTR10E-int LTR ERV1 28 282 -6367 351 213 64 32 chr10 13498875 13498969 -132090319 + LTR10E-int LTR ERV1 975 1071 -5578 268 152 51 0 chr10 13498976 13499055 -132090233 + LTR10E-int LTR ERV1 840 922 -5974 246 164 0 0 chr10 13499369 13499424 -132089864 + GA-rich Low_complexity Low_complexity 2 56 0 1537 106 27 3 chr10 13499478 13499773 -132089515 + LTR10E-int LTR ERV1 1919 2909 -2393 2532 153 38 3 chr10 13500360 13500848 -132088440 + LTR10E-int LTR ERV1 2608 4796 -1853 3150 215 5 12 chr10 13500889 13501201 -132088087 + LTR10E-int LTR ERV1 3375 3683 -3213 7065 112 16 5 chr10 13501201 13502197 -132087091 - LTR13 LTR ERVK 0 1007 1 3150 215 5 12 chr10 13502197 13502457 -132086831 + LTR10E-int LTR ERV1 3683 3943 -2953 381 240 0 10 chr10 13502453 13502553 -132086735 + LTR10E-int LTR ERV1 6550 6648 -1 * 4742 73 5 17 chr10 13502555 13503195 -132086093 + LTR10E LTR ERV1 2 633 0 2210 128 48 29 chr10 13503195 13503448 -132085840 + MER41C LTR ERV1 172 436 -118 2142 109 6 10 chr10 13503448 13503761 -132085527 - AluSp SINE Alu -1 312 1 2210 128 48 29 chr10 13503761 13503883 -132085405 + MER41C LTR ERV1 436 554 0 224 255 20 0 chr10 13504587 13504638 -132084650 - L2 LINE L2 -1384 1930 1879 2103 136 0 0 chr10 13504859 13505167 -132084121 + AluSx SINE Alu 1 308 -4 2062 91 35 0 chr10 13505633 13505920 -132083368 - AluY SINE Alu -14 297 1 2372 70 3 0 chr10 13506297 13506595 -132082693 + AluSp SINE Alu 1 299 -14 575 277 169 0 chr10 13507140 13507306 -132081982 - MER91A DNA MER1_type 0 196 3 1938 112 51 0 chr10 13507915 13508210 -132081078 + AluSx SINE Alu 1 310 -2 440 45 149 0 chr10 13508532 13508599 -132080689 + AluY SINE Alu 226 302 -9 1970 105 21 0 chr10 13508602 13508888 -132080400 - AluSx SINE Alu -18 294 3 2077 128 0 0 chr10 13510060 13510356 -132078932 - AluSx SINE Alu -16 296 1 247 307 13 0 chr10 13510528 13510603 -132078685 + MIR SINE MIR 69 144 -64 975 132 0 0 chr10 13510884 13511020 -132078268 + AluSx SINE Alu 2 137 -175 1250 126 5 0 chr10 13511543 13511734 -132077554 + AluSx SINE Alu 121 312 0 294 73 0 0 chr10 13512211 13512252 -132077036 + (TG)n Simple_repeat Simple_repeat 2 42 0 434 320 107 39 chr10 13512330 13512611 -132076677 - L3 LINE CR1 -20 1557 1258 264 337 47 58 chr10 13512897 13513014 -132076274 + L2 LINE L2 2416 2532 -782 2122 119 0 10 chr10 13513014 13513324 -132075964 - AluSx SINE Alu -5 307 1 264 337 47 58 chr10 13513324 13513396 -132075892 + L2 LINE L2 2532 2603 -711 * 533 250 0 37 chr10 13513390 13513526 -132075762 + L2 LINE L2 3179 3309 -4 194 388 16 8 chr10 13513768 13513889 -132075399 + L2 LINE L2 2914 3035 -237 264 85 0 43 chr10 13514017 13514064 -132075224 + L2 LINE L2 3227 3271 -1 28 71 0 0 chr10 13514325 13514381 -132074907 + AT_rich Low_complexity Low_complexity 1 56 0 269 348 146 33 chr10 13516321 13516517 -132072771 + L2 LINE L2 1971 2143 -1171 2887 97 39 9 chr10 13516517 13516867 -132072421 - L1PB1 LINE L1 0 6151 5813 429 76 0 0 chr10 13516867 13516933 -132072355 + (TA)n Simple_repeat Simple_repeat 2 67 0 1830 127 6 44 chr10 13516938 13517253 -132072035 - AluSc SINE Alu -6 303 1 2887 97 39 9 chr10 13517253 13517329 -132071959 - L1PB1 LINE L1 -341 5810 5706 269 348 146 33 chr10 13517329 13517494 -132071794 + L2 LINE L2 2143 2373 -941 2033 146 39 33 chr10 13517524 13517604 -132071684 + MLT1A1 LTR MaLR 1 79 -286 2044 203 59 67 chr10 13517604 13518160 -132071128 - MLT2B3 LTR ERVL -2 552 1 2033 146 39 33 chr10 13518160 13518442 -132070846 + MLT1A1 LTR MaLR 79 365 0 2447 88 36 36 chr10 13519970 13520334 -132068954 - THE1B LTR MaLR 0 364 1 212 279 38 51 chr10 13520453 13520532 -132068756 - MIR3 SINE MIR -25 183 106 351 0 0 0 chr10 13521105 13521144 -132068144 + (ATG)n Simple_repeat Simple_repeat 2 40 0 1908 98 8 0 chr10 13521150 13521405 -132067883 - AluSc SINE Alu -52 257 1 1803 154 0 0 chr10 13521567 13521847 -132067441 + AluJb SINE Alu 17 296 -16 570 181 0 19 chr10 13522084 13522189 -132067099 - L1M3 LINE L1 -492 5688 5586 2069 151 12 12 chr10 13522334 13522671 -132066617 - MER1B DNA MER1_type 0 337 1 880 235 50 32 chr10 13522719 13523000 -132066288 - L1MB8 LINE L1 -7 6171 5886 440 138 0 11 chr10 13523070 13523143 -132066145 + (TTCC)n Simple_repeat Simple_repeat 3 76 -12 1799 144 47 3 chr10 13523143 13523442 -132065846 - AluSx SINE Alu 0 312 1 440 138 0 11 chr10 13523442 13523455 -132065833 + (TTCC)n Simple_repeat Simple_repeat 76 88 0 241 257 14 27 chr10 13524301 13524375 -132064913 - MIR SINE MIR -28 234 162 460 292 26 47 chr10 13524391 13524412 -132064876 - MER46C DNA MER2_type -13 325 305 1977 141 0 0 chr10 13524412 13524710 -132064578 + AluSx SINE Alu 1 298 -14 460 292 26 47 chr10 13524710 13524921 -132064367 - MER46C DNA MER2_type -33 305 98 388 247 0 0 chr10 13524965 13525050 -132064238 - MIR SINE MIR -108 154 70 827 200 12 0 chr10 13525275 13525445 -132063843 - AluJb SINE Alu -1 311 140 2380 84 0 0 chr10 13525686 13525996 -132063292 - AluSg SINE Alu 0 310 1 610 96 19 10 chr10 13526333 13526437 -132062851 + (TCCC)n Simple_repeat Simple_repeat 4 108 0 2245 59 0 10 chr10 13527263 13527553 -132061735 - AluY SINE Alu -24 287 1 1203 187 0 9 chr10 13527589 13527814 -132061474 - AluJo SINE Alu -89 223 1 1917 131 0 13 chr10 13528432 13528730 -132060558 - AluSx SINE Alu -18 294 1 1624 155 0 31 chr10 13529180 13529470 -132059818 + AluJb SINE Alu 1 281 -31 233 57 29 0 chr10 13529484 13529519 -132059769 + (TGAA)n Simple_repeat Simple_repeat 3 38 0 754 322 120 29 chr10 13530065 13530271 -132059017 - L2 LINE L2 -5 3308 3122 1901 130 14 3 chr10 13530271 13530555 -132058733 + AluSx SINE Alu 5 291 -21 754 322 120 29 chr10 13530555 13531065 -132058223 - L2 LINE L2 -191 3122 2525 284 67 0 0 chr10 13532116 13532161 -132057127 - Alu SINE Alu 0 302 258 262 139 28 0 chr10 13532440 13532512 -132056776 + (TA)n Simple_repeat Simple_repeat 1 74 0 2505 50 0 0 chr10 13533927 13534226 -132055062 - AluY SINE Alu -12 299 1 2125 114 0 3 chr10 13534286 13534593 -132054695 - AluSx SINE Alu -6 306 1 253 217 0 0 chr10 13535917 13535931 -132053357 - L1MA10 LINE L1 0 6334 6321 3796 171 40 20 chr10 13535931 13536819 -132052469 - L1MB5 LINE L1 -5 6161 5227 2557 38 0 19 chr10 13536819 13537134 -132052154 - AluY SINE Alu -2 309 1 3796 171 40 20 chr10 13537134 13537346 -132051942 - L1MB5 LINE L1 -939 5227 5021 472 119 12 60 chr10 13537352 13537436 -132051852 + AluS SINE Alu 220 299 -11 764 156 20 193 chr10 13537436 13537623 -132051665 - L1MB5 LINE L1 -1112 5034 4816 2099 118 26 45 chr10 13537623 13538003 -132051285 - THE1C LTR MaLR 0 375 3 764 156 20 193 chr10 13538003 13538275 -132051013 - L1MB5 LINE L1 -1330 4816 4532 654 213 37 69 chr10 13538250 13538438 -132050850 - L1MB5 LINE L1 -1909 4237 4056 * 863 294 96 0 chr10 13538441 13538734 -132050554 - HAL1 LINE L1 -2179 328 8 2205 103 0 0 chr10 13539520 13539822 -132049466 - AluSc SINE Alu -7 302 1 222 206 39 118 chr10 13540204 13540306 -132048982 - L2 LINE L2 0 3313 3220 285 309 135 29 chr10 13541573 13541780 -132047508 + MIR SINE MIR 5 233 -29 2785 13 0 0 chr10 13543127 13543427 -132045861 - AluY SINE Alu -11 300 1 1875 157 20 0 chr10 13543593 13543893 -132045395 + AluJb SINE Alu 1 306 -6 773 202 0 0 chr10 13543999 13544128 -132045160 - FLAM_C SINE Alu -3 130 2 594 113 160 0 chr10 13544388 13544494 -132044794 - FLAM_C SINE Alu -10 123 1 1575 257 76 14 chr10 13544920 13545370 -132043918 - L1ME LINE L1 -400 5770 5350 2270 113 0 25 chr10 13545370 13545690 -132043598 - AluSx SINE Alu 0 312 1 1575 257 76 14 chr10 13545690 13546191 -132043097 - L1ME LINE L1 -820 5350 4757 2081 98 61 0 chr10 13546204 13546481 -132042807 - AluSc SINE Alu -15 294 1 22 0 0 0 chr10 13546654 13546676 -132042612 + AT_rich Low_complexity Low_complexity 1 22 0 2519 80 0 0 chr10 13546992 13547293 -132041995 + AluSg SINE Alu 1 301 -9 1110 135 18 0 chr10 13547430 13547593 -132041695 - AluSx SINE Alu -20 290 125 23 78 0 0 chr10 13547910 13547961 -132041327 + AT_rich Low_complexity Low_complexity 1 51 0 32 26 0 0 chr10 13548101 13548140 -132041148 + AT_rich Low_complexity Low_complexity 1 39 0 918 193 0 6 chr10 13548146 13548307 -132040981 - FRAM SINE Alu -6 160 1 308 125 0 0 chr10 13548311 13548359 -132040929 - AluSq/x SINE Alu -169 133 86 * 1575 191 17 7 chr10 13548354 13548642 -132040646 - MLT1F LTR MaLR -251 291 1 197 348 35 9 chr10 13548751 13548866 -132040422 + MIR SINE MIR 132 249 -13 424 135 0 14 chr10 13549516 13549590 -132039698 + AluJ/FRAM SINE Alu 228 300 -12 1101 139 0 6 chr10 13549741 13549899 -132039389 - AluJb SINE Alu -14 298 142 2211 134 0 0 chr10 13551215 13551521 -132037767 - AluSx SINE Alu -6 306 1 2211 109 16 0 chr10 13551837 13552140 -132037148 - AluSx SINE Alu -4 308 1 635 86 0 0 chr10 13552142 13552223 -132037065 - AluSq/x SINE Alu -182 131 51 1793 160 3 7 chr10 13553337 13553630 -132035658 + AluJo SINE Alu 20 311 -1 2383 93 7 0 chr10 13553640 13553942 -132035346 + AluSg SINE Alu 1 304 -6 2143 130 3 0 chr10 13554410 13554711 -132034577 + AluSx SINE Alu 1 302 -10 185 32 0 65 chr10 13554716 13554747 -132034541 + (GGAGAA)n Simple_repeat Simple_repeat 4 32 0 23 0 0 0 chr10 13554823 13554846 -132034442 + AT_rich Low_complexity Low_complexity 1 23 0 500 255 7 21 chr10 13556325 13556470 -132032818 - L1MB1 LINE L1 -6 6162 6020 843 182 48 18 chr10 13556827 13556992 -132032296 - AluJo SINE Alu -127 185 16 2145 245 126 10 chr10 13556992 13557934 -132031354 - L1M4c LINE L1 -4516 1375 388 315 259 21 70 chr10 13558119 13558262 -132031026 - L1M4c LINE L1 -5507 384 249 232 333 43 26 chr10 13558344 13558461 -132030827 - L1M3d LINE L1 -5253 638 520 1058 309 63 40 chr10 13558527 13559144 -132030144 - L1M3d LINE L1 -5207 684 15 2356 97 3 3 chr10 13559583 13559883 -132029405 + AluSx SINE Alu 1 300 -12 1967 143 3 31 chr10 13560457 13560778 -132028510 + AluSx SINE Alu 1 312 0 23 68 0 0 chr10 13560796 13560840 -132028448 + AT_rich Low_complexity Low_complexity 1 44 0 5573 170 63 132 chr10 13560856 13562709 -132026579 + L1MC2 LINE L1 44 1881 -4545 3275 212 58 45 chr10 13562714 13562958 -132026330 + L1MC2 LINE L1 2251 2490 -3936 2323 117 0 0 chr10 13562958 13563265 -132026023 + AluSg SINE Alu 1 307 -3 3275 212 58 45 chr10 13563265 13563594 -132025694 + L1MC2 LINE L1 2490 2813 -3613 1575 190 23 72 chr10 13563594 13563984 -132025304 + MLT1A2 LTR MaLR 4 374 0 3275 212 58 45 chr10 13563984 13564071 -132025217 + L1MC2 LINE L1 2813 2897 -3529 2288 135 76 22 chr10 13564071 13564185 -132025103 - MSTB1 LTR MaLR 0 432 326 1989 143 28 0 chr10 13564185 13564472 -132024816 - AluSx SINE Alu -17 295 1 2288 135 76 22 chr10 13564472 13564764 -132024524 - MSTB1 LTR MaLR -106 326 4 3275 212 58 45 chr10 13564764 13565030 -132024258 + L1MC2 LINE L1 2897 3158 -3268 1869 129 17 17 chr10 13565030 13565317 -132023971 + AluSx SINE Alu 1 287 -25 294 29 0 0 chr10 13565317 13565352 -132023936 + (TA)n Simple_repeat Simple_repeat 2 36 0 3275 212 58 45 chr10 13565352 13565717 -132023571 + L1MC2 LINE L1 3157 3558 -2868 2285 229 29 24 chr10 13565762 13565879 -132023409 + L1MC2 LINE L1 4648 4763 -1663 2422 100 0 0 chr10 13565879 13566188 -132023100 + AluSq SINE Alu 1 309 -4 2285 229 29 24 chr10 13566188 13566693 -132022595 + L1MC2 LINE L1 4763 5273 -1153 * 3748 125 21 22 chr10 13566689 13566808 -132022480 + L1MC2 LINE L1 5482 5600 -1024 1774 172 14 3 chr10 13566808 13567104 -132022184 + AluJo SINE Alu 1 299 -13 3748 125 21 22 chr10 13567104 13567648 -132021640 + L1MC2 LINE L1 5600 6144 -480 483 115 58 23 chr10 13567648 13567735 -132021553 - LTR49 LTR ERV1 0 595 506 2568 63 3 0 chr10 13567735 13568037 -132021251 + AluSp SINE Alu 1 303 -10 234 0 0 0 chr10 13568037 13568063 -132021225 + (TA)n Simple_repeat Simple_repeat 2 27 0 1610 79 4 109 chr10 13568554 13568820 -132020468 + AluSp SINE Alu 66 303 -10 234 0 0 0 chr10 13568820 13568846 -132020442 + (TA)n Simple_repeat Simple_repeat 2 27 0 1394 152 105 50 chr10 13569188 13569465 -132019823 + AluJb SINE Alu 1 292 -20 2399 109 3 0 chr10 13569809 13570120 -132019168 + AluSx SINE Alu 1 312 0 2187 134 109 14 chr10 13570165 13570570 -132018718 - MER61C LTR ERV1 0 434 6 29760 117 55 37 chr10 13570570 13573711 -132015577 - MER61C-int LTR ERV1 -4 5213 1936 2407 69 3 3 chr10 13573711 13574001 -132015287 - AluSp SINE Alu -23 290 1 29760 117 55 37 chr10 13574001 13575974 -132013314 - MER61C-int LTR ERV1 -3281 1936 2 2113 125 115 18 chr10 13575974 13576358 -132012930 - MER61C LTR ERV1 0 434 14 228 240 0 0 chr10 13576325 13576375 -132012913 - LTR28 LTR ERV1 -958 62 13 * 915 193 6 6 chr10 13576651 13576812 -132012476 + AluJb SINE Alu 133 293 -19 398 316 33 7 chr10 13576812 13576964 -132012324 - MER5A DNA MER1_type -32 157 2 220 284 147 0 chr10 13577046 13577155 -132012133 - L2 LINE L2 0 3313 3189 478 139 9 102 chr10 13577892 13578000 -132011288 + MER4A LTR ERV1 1 98 -566 1851 118 5 57 chr10 13578000 13578170 -132011118 + MER4A LTR ERV1 261 438 -226 1585 96 0 18 chr10 13578170 13578388 -132010900 - AluY SINE Alu -12 299 86 1851 118 5 57 chr10 13578388 13578582 -132010706 + MER4A LTR ERV1 438 664 0 191 222 63 0 chr10 13578655 13578718 -132010570 + MIR SINE MIR 126 192 -70 2179 106 6 13 chr10 13578752 13579063 -132010225 + AluSc SINE Alu 1 309 0 402 290 32 8 chr10 13579318 13579442 -132009846 + MIR SINE MIR 26 152 -110 1851 89 0 0 chr10 13579682 13579918 -132009370 - LTR8 LTR ERV1 0 691 456 375 22 0 0 chr10 13579919 13579964 -132009324 - LTR8 LTR ERV1 -192 499 455 3385 87 26 14 chr10 13579964 13580457 -132008831 - LTR8 LTR ERV1 -192 499 1 4836 131 18 25 chr10 13580754 13581539 -132007749 + MER4E LTR ERV1 1 779 0 218 232 58 0 chr10 13581846 13581915 -132007373 - MIR SINE MIR -70 192 120 223 367 54 31 chr10 13582020 13582173 -132007115 + L2 LINE L2 1814 1962 -1352 1975 134 0 4 chr10 13582173 13582450 -132006838 + AluJo SINE Alu 6 281 -31 223 367 54 31 chr10 13582450 13582645 -132006643 + L2 LINE L2 1962 2170 -1144 198 0 0 0 chr10 13582801 13582823 -132006465 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 2177 89 17 0 chr10 13582873 13583165 -132006123 - AluSc SINE Alu -12 297 1 564 233 60 84 chr10 13583560 13583809 -132005479 - MLT1J1 LTR MaLR -22 424 182 324 227 100 9 chr10 13583960 13584070 -132005218 + MIR SINE MIR 113 232 -30 2169 103 0 10 chr10 13585084 13585375 -132003913 - AluSg SINE Alu -22 288 1 1886 137 17 17 chr10 13585664 13585963 -132003325 - AluJo SINE Alu -13 299 1 257 200 362 29 chr10 13585966 13586071 -132003217 - MIR3 SINE MIR -60 148 9 1036 261 114 19 chr10 13586525 13586885 -132002403 + MLT1J1 LTR MaLR 9 402 -44 623 204 138 22 chr10 13587285 13587358 -132001930 + MLT1H LTR MaLR 3 66 -483 1680 153 29 7 chr10 13587358 13587639 -132001649 + AluJo SINE Alu 11 297 -15 623 204 138 22 chr10 13587639 13587831 -132001457 + MLT1H LTR MaLR 66 310 -239 2057 128 3 0 chr10 13588006 13588294 -132000994 + AluSq SINE Alu 1 289 -24 195 100 0 0 chr10 13588294 13588324 -132000964 + (GGAGA)n Simple_repeat Simple_repeat 2 31 0 403 191 0 24 chr10 13588327 13588411 -132000877 - LTR24B LTR ERV1 -491 85 4 256 277 0 15 chr10 13588460 13588525 -132000763 - L2 LINE L2 -86 3186 3123 1845 130 3 37 chr10 13588792 13589092 -132000196 - AluSx SINE Alu -4 308 19 1834 154 48 3 chr10 13589394 13589686 -131999602 - AluJo SINE Alu -7 305 1 234 200 0 20 chr10 13589922 13589972 -131999316 + Charlie7 DNA MER1_type 39 87 -2525 528 16 0 0 chr10 13589973 13590034 -131999254 + (TG)n Simple_repeat Simple_repeat 1 61 0 1955 136 7 14 chr10 13590034 13590313 -131998975 - AluSx SINE Alu -33 279 3 505 164 39 0 chr10 13590326 13590430 -131998858 - L1MB1 LINE L1 0 6168 6061 1802 169 7 0 chr10 13590596 13590880 -131998408 - AluJo SINE Alu -26 286 1 1721 138 17 38 chr10 13591896 13592185 -131997103 + AluJo SINE Alu 15 297 -15 2460 97 0 0 chr10 13592214 13592522 -131996766 + AluSg SINE Alu 1 308 -2 2625 114 76 36 chr10 13594450 13594480 -131994808 + MER4C LTR ERV1 1 28 -437 2128 97 0 7 chr10 13594480 13594769 -131994519 + AluSc SINE Alu 1 287 -22 2625 114 76 36 chr10 13594769 13595185 -131994103 + MER4C LTR ERV1 28 465 0 341 207 182 16 chr10 13595404 13595525 -131993763 + MER103 DNA DNA 18 158 -8 542 258 84 91 chr10 13595693 13595991 -131993297 + Charlie2 DNA MER1_type 4 299 -2563 2163 202 117 48 chr10 13596022 13596235 -131993053 + Charlie2 DNA MER1_type 1856 2053 -809 2204 87 16 13 chr10 13596235 13596547 -131992741 - AluSq SINE Alu 0 313 1 1908 149 0 0 chr10 13596547 13596848 -131992440 - AluJo SINE Alu -11 301 1 1836 128 0 7 chr10 13596855 13597163 -131992125 - AluSg SINE Alu 0 310 1 2163 202 117 48 chr10 13597163 13597333 -131991955 + Charlie2 DNA MER1_type 2058 2215 -647 1595 136 75 4 chr10 13597333 13597613 -131991675 - AluSc SINE Alu -9 300 1 2163 202 117 48 chr10 13597613 13598015 -131991273 + Charlie2 DNA MER1_type 2215 2706 -156 5101 166 64 7 chr10 13598018 13599348 -131989940 + L1PA16 LINE L1 4488 5933 -233 2004 134 0 6 chr10 13599348 13599661 -131989627 - AluSx SINE Alu -1 311 1 5101 166 64 7 chr10 13599661 13599900 -131989388 + L1PA16 LINE L1 5933 6157 -9 482 203 41 8 chr10 13599908 13600031 -131989257 + Charlie2 DNA MER1_type 2687 2813 -49 2472 48 7 3 chr10 13600033 13600343 -131988945 - AluY SINE Alu 0 311 1 378 355 16 0 chr10 13600766 13600887 -131988401 - MIR SINE MIR -126 136 14 721 113 0 0 chr10 13601044 13601141 -131988147 + AluS SINE Alu 2 98 -215 1804 98 144 0 chr10 13601182 13601446 -131987842 + AluSx SINE Alu 1 302 0 288 0 0 0 chr10 13602230 13602262 -131987026 + (TG)n Simple_repeat Simple_repeat 1 32 0 1745 132 57 0 chr10 13602262 13602527 -131986761 - AluSq SINE Alu -33 280 1 232 280 90 30 chr10 13603022 13603122 -131986166 - MER20B DNA MER1_type -614 169 64 181 321 18 0 chr10 13603199 13603255 -131986033 - MIR SINE MIR -77 131 75 2009 94 0 24 chr10 13603514 13603802 -131985486 - AluSx SINE Alu -17 295 15 2575 95 52 5 chr10 13604562 13604950 -131984338 - L1PA11 LINE L1 0 6174 5769 789 163 0 59 chr10 13605135 13605270 -131984018 - FLAM_C SINE Alu -6 127 1 455 308 98 55 chr10 13605310 13605749 -131983539 + L1MC5 LINE L1 7395 7852 -109 1542 181 35 17 chr10 13605865 13606153 -131983135 + AluJb SINE Alu 1 293 -19 2212 110 0 0 chr10 13606163 13606472 -131982816 + AluSx SINE Alu 1 309 -3 1914 124 3 3 chr10 13606779 13607084 -131982204 - AluSc SINE Alu 0 305 1 216 0 0 0 chr10 13607556 13607580 -131981708 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 2097 118 0 16 chr10 13607891 13608206 -131981082 - AluSx SINE Alu -1 311 2 315 0 0 0 chr10 13608220 13608255 -131981033 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 35001 60 1 2 chr10 13608451 13613697 -131975591 - L1PA5 LINE L1 -1 6153 912 2087 120 7 0 chr10 13614561 13614862 -131974426 - AluSx SINE Alu -9 303 1 2307 72 0 10 chr10 13615091 13615398 -131973890 - AluY SINE Alu -7 304 1 281 299 47 9 chr10 13616192 13616299 -131972989 + L1ME4a LINE L1 5554 5664 -457 3401 190 344 87 chr10 13616513 13616675 -131972613 + L1MA8 LINE L1 1 120 -6930 2536 48 0 0 chr10 13616675 13616986 -131972302 + AluY SINE Alu 1 311 0 3401 190 344 87 chr10 13616986 13617535 -131971753 + L1MA8 LINE L1 120 527 -6523 916 69 0 0 chr10 13617535 13617651 -131971637 - AluSg/x SINE Alu -15 295 180 3401 190 344 87 chr10 13617651 13617723 -131971565 + L1MA8 LINE L1 527 579 -6471 2108 98 17 0 chr10 13617723 13618018 -131971270 - AluSg SINE Alu -10 300 1 3401 190 344 87 chr10 13618018 13618821 -131970467 + L1MA8 LINE L1 579 2133 -4917 * 12876 167 63 12 chr10 13618820 13619422 -131969866 + L1MA8 LINE L1 3587 4157 -3094 1789 147 10 16 chr10 13619422 13619729 -131969559 + AluSx SINE Alu 1 305 -7 12876 167 63 12 chr10 13619729 13622610 -131966678 + L1MA8 LINE L1 4157 7245 -6 503 289 148 30 chr10 13622788 13623161 -131966127 - L2 LINE L2 -5 3308 2892 1967 106 53 0 chr10 13623276 13623559 -131965729 + AluSx SINE Alu 1 298 -14 1792 130 60 3 chr10 13625279 13625564 -131963724 + AluSg SINE Alu 1 301 -9 237 197 171 34 chr10 13625825 13625942 -131963346 + MER103 DNA DNA 33 165 -1 2151 104 3 0 chr10 13626508 13626807 -131962481 - AluSx SINE Alu -11 301 2 347 342 110 57 chr10 13626947 13627301 -131961987 - L2 LINE L2 -3 3269 2897 414 331 34 3 chr10 13627340 13627536 -131961752 - MIR SINE MIR -1 261 61 936 214 77 5 chr10 13628780 13628976 -131960312 - MER58A DNA MER1_type -14 210 1 1780 163 0 7 chr10 13629679 13629986 -131959302 - AluJo SINE Alu -7 305 1 395 289 79 31 chr10 13630098 13630326 -131958962 + L1ME4a LINE L1 5850 6088 -33 182 290 130 22 chr10 13632224 13632362 -131956926 - L2 LINE L2 -277 2995 2843 358 247 31 10 chr10 13632439 13632536 -131956752 - MIR SINE MIR 0 262 164 950 286 40 64 chr10 13632557 13632598 -131956690 - LTR16A LTR ERVL -12 438 398 2154 87 0 19 chr10 13632598 13632907 -131956381 + AluSc SINE Alu 1 303 -6 950 286 40 64 chr10 13632907 13633288 -131956000 - LTR16A LTR ERVL -52 398 26 332 222 10 40 chr10 13633315 13633414 -131955874 - MIR SINE MIR -151 111 16 2279 66 0 41 chr10 13633457 13633774 -131955514 - AluY SINE Alu -7 304 1 2452 122 17 0 chr10 13633941 13634293 -131954995 - THE1B LTR MaLR 0 364 7 676 291 117 7 chr10 13634459 13634768 -131954520 - L1MC4a LINE L1 -1892 5916 5574 528 239 1 39 chr10 13634806 13634972 -131954316 - L1P1 LINE L1 -655 5500 5341 1467 133 26 0 chr10 13638154 13638380 -131950908 + AluSg/x SINE Alu 72 303 -9 574 358 74 39 chr10 13638627 13638736 -131950552 + ERVL LTR ERVL 767 871 -4893 854 212 17 22 chr10 13638736 13638915 -131950373 - MER45A DNA AcHobo 0 178 1 574 358 74 39 chr10 13638915 13639629 -131949659 + ERVL LTR ERVL 871 1619 -4145 411 257 25 20 chr10 13639691 13639936 -131949352 + GA-rich Low_complexity Low_complexity 1 246 0 382 299 34 17 chr10 13639936 13640053 -131949235 + polypurine Low_complexity Low_complexity 1 119 0 195 375 0 0 chr10 13640054 13640110 -131949178 + A-rich Low_complexity Low_complexity 1 56 0 230 360 0 0 chr10 13640111 13640161 -131949127 + G-rich Low_complexity Low_complexity 1 50 0 180 333 0 0 chr10 13640161 13640218 -131949070 + A-rich Low_complexity Low_complexity 1 57 0 1194 181 22 88 chr10 13640466 13640817 -131948471 - LTR29 LTR ERV1 -134 510 137 268 251 0 75 chr10 13640823 13640916 -131948372 - MER34 LTR ERV1 -469 73 3 2301 139 82 13 chr10 13640917 13641369 -131947919 + L1MC2 LINE L1 5860 6342 -2 25 31 0 0 chr10 13641499 13641531 -131947757 + AT_rich Low_complexity Low_complexity 1 32 0 2041 82 3 76 chr10 13641583 13641900 -131947388 - AluSg SINE Alu -16 294 1 1092 110 0 0 chr10 13641900 13642045 -131947243 - AluSq/x SINE Alu -167 145 1 1859 117 24 12 chr10 13642065 13642466 -131946822 + MER4D LTR ERV1 3 482 -421 1969 118 64 4 chr10 13642948 13643228 -131946060 - AluSq SINE Alu -16 297 1 291 248 83 25 chr10 13643629 13643750 -131945538 - MIR SINE MIR -6 256 129 13070 27 1 8 chr10 13643750 13646041 -131943247 + L1PA4 LINE L1 3865 6152 -3 261 164 0 0 chr10 13646049 13646122 -131943166 + (TA)n Simple_repeat Simple_repeat 1 73 0 2575 67 0 3 chr10 13647305 13647617 -131941671 - AluY SINE Alu 0 311 1 230 180 20 20 chr10 13648029 13648079 -131941209 - MER2 DNA MER2_type 0 345 296 203 214 0 32 chr10 13648091 13648217 -131941071 + (CCG)n Simple_repeat Simple_repeat 2 123 0 2255 100 3 10 chr10 13648324 13648633 -131940655 - AluSq SINE Alu -6 307 1 271 306 63 45 chr10 13648796 13649018 -131940270 + L2 LINE L2 2250 2475 -839 369 0 0 0 chr10 13649790 13649831 -131939457 + (TTTA)n Simple_repeat Simple_repeat 1 41 0 2132 66 7 42 chr10 13649831 13650119 -131939169 - AluSg SINE Alu -32 278 1 281 253 36 0 chr10 13650772 13650855 -131938433 - MIR3 SINE MIR -41 167 82 23 0 0 0 chr10 13651298 13651321 -131937967 + GC_rich Low_complexity Low_complexity 1 23 0 252 59 0 0 chr10 13651540 13651574 -131937714 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 596 291 81 62 chr10 13651962 13652282 -131937006 - L2 LINE L2 -511 2803 2478 240 159 48 32 chr10 13652379 13652442 -131936846 + L2 LINE L2 3205 3268 -4 2557 38 14 0 chr10 13652453 13652744 -131936544 + AluY SINE Alu 1 295 -16 1714 148 8 4 chr10 13652744 13653007 -131936281 + AluSx SINE Alu 33 297 -15 711 200 8 8 chr10 13653361 13653486 -131935802 - AluSq/x SINE Alu -187 126 2 310 216 72 52 chr10 13653606 13653759 -131935529 - L2 LINE L2 -702 2612 2457 326 244 288 0 chr10 13654104 13654264 -131935024 - MIR SINE MIR -27 235 30 873 138 0 31 chr10 13654432 13654562 -131934726 + FLAM_C SINE Alu 1 126 -17 1622 159 61 52 chr10 13654701 13655028 -131934260 - MER44D DNA MER2_type 0 609 10 2211 134 0 3 chr10 13655248 13655561 -131933727 + AluSx SINE Alu 1 312 0 828 302 186 23 chr10 13655729 13656009 -131933279 - L2 LINE L2 -1619 1695 1462 2459 78 3 0 chr10 13656009 13656305 -131932983 + AluSp SINE Alu 1 297 -16 297 75 0 0 chr10 13656305 13656345 -131932943 + (TA)n Simple_repeat Simple_repeat 2 41 0 828 302 186 23 chr10 13656345 13656528 -131932760 - L2 LINE L2 -1852 1462 1310 1557 153 12 12 chr10 13656528 13656776 -131932512 + AluJo SINE Alu 17 264 -48 828 302 186 23 chr10 13656776 13656787 -131932501 - L2 LINE L2 -2004 1310 1302 201 74 0 0 chr10 13656787 13656814 -131932474 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 828 302 186 23 chr10 13656814 13657240 -131932048 - L2 LINE L2 -2012 1302 645 257 278 0 0 chr10 13657409 13657463 -131931825 - L2 LINE L2 -10 3303 3250 186 286 32 0 chr10 13657640 13657703 -131931585 - L2 LINE L2 -3163 151 87 857 277 98 39 chr10 13658260 13658481 -131930807 + L1ME4a LINE L1 5318 5525 -645 1969 212 62 58 chr10 13658481 13659090 -131930198 + LTR9 LTR ERV1 1 612 0 857 277 98 39 chr10 13659090 13659363 -131929925 + L1ME4a LINE L1 5525 5834 -336 2245 104 0 0 chr10 13659363 13659661 -131929627 - AluSx SINE Alu -14 298 1 857 277 98 39 chr10 13659661 13659711 -131929577 + L1ME4a LINE L1 5834 5880 -290 253 194 32 86 chr10 13659938 13660031 -131929257 + L1ME4a LINE L1 5969 6056 -65 213 65 0 0 chr10 13660330 13660361 -131928927 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 652 136 152 30 chr10 13660363 13660495 -131928793 - L1PA16 LINE L1 -9 6157 6010 1784 154 3 33 chr10 13661423 13661729 -131927559 - AluJo SINE Alu -15 297 1 251 196 0 0 chr10 13662456 13662507 -131926781 + (TG)n Simple_repeat Simple_repeat 2 52 0 1211 202 37 4 chr10 13662624 13662867 -131926421 + AluJo SINE Alu 44 294 -18 189 107 0 0 chr10 13663730 13663758 -131925530 + (AAATG)n Simple_repeat Simple_repeat 3 30 0 1858 114 51 4 chr10 13663790 13664063 -131925225 - AluSx SINE Alu -4 308 23 790 226 31 20 chr10 13664220 13664415 -131924873 - MER3 DNA MER1_type -5 204 8 2371 69 21 0 chr10 13664502 13664790 -131924498 + AluSp SINE Alu 1 294 -19 1597 163 58 11 chr10 13664810 13665087 -131924201 + AluJb SINE Alu 4 293 -19 404 143 0 0 chr10 13665736 13665806 -131923482 - L1 LINE L1 -1456 4690 4621 23 0 0 0 chr10 13665992 13666015 -131923273 + AT_rich Low_complexity Low_complexity 1 23 0 1842 172 14 3 chr10 13666270 13666561 -131922727 + AluJo SINE Alu 1 294 -18 1039 144 80 21 chr10 13666980 13667168 -131922120 - MER46A DNA MER2_type 0 236 38 22 0 0 0 chr10 13667168 13667190 -131922098 + AT_rich Low_complexity Low_complexity 1 22 0 346 214 7 44 chr10 13667202 13667245 -131922043 - LTR57 LTR ERVL 0 411 368 1572 168 80 0 chr10 13667245 13667519 -131921769 + AluJb SINE Alu 1 296 -16 346 214 7 44 chr10 13667519 13667616 -131921672 - LTR57 LTR ERVL -43 368 240 5585 135 45 12 chr10 13667620 13667762 -131921526 - L1 LINE L1 -1007 5139 5003 1952 113 35 7 chr10 13667762 13668044 -131921244 - AluSx SINE Alu -22 290 1 5585 135 45 12 chr10 13668044 13668884 -131920404 - L1 LINE L1 -1143 5003 4125 1183 145 5 20 chr10 13668888 13669088 -131920200 - LTR57 LTR ERVL -214 197 1 2192 121 10 0 chr10 13669627 13669924 -131919364 + AluSx SINE Alu 1 300 -12 359 333 24 30 chr10 13670777 13670945 -131918343 + MIR3 SINE MIR 33 199 -9 2146 99 13 3 chr10 13671048 13671351 -131917937 + L1PA10 LINE L1 5861 6166 -2 1637 197 0 7 chr10 13671847 13672137 -131917151 + AluJo SINE Alu 1 288 -24 1627 161 67 11 chr10 13672836 13673121 -131916167 + AluJb SINE Alu 8 308 -4 1700 179 0 39 chr10 13673345 13673517 -131915771 - AluJb SINE Alu -16 296 140 1925 141 14 10 chr10 13673517 13673814 -131915474 - AluSq SINE Alu -15 298 1 1700 179 0 39 chr10 13673814 13673948 -131915340 - AluJb SINE Alu -172 140 2 891 294 12 8 chr10 13674744 13674996 -131914292 - MER70A LTR ERVL -106 366 114 243 288 98 37 chr10 13675079 13675242 -131914046 - MLT1J LTR MaLR -229 282 110 1854 161 7 3 chr10 13675432 13675717 -131913571 - AluJb SINE Alu -25 287 2 4030 151 37 23 chr10 13676291 13676366 -131912922 - L1MB7 LINE L1 0 6184 6112 2095 154 0 0 chr10 13676366 13676672 -131912616 + AluSx SINE Alu 1 306 -6 4030 151 37 23 chr10 13676672 13677332 -131911956 - L1MB7 LINE L1 -72 6112 5439 2170 115 0 0 chr10 13677524 13677811 -131911477 + AluSx SINE Alu 6 292 -20 912 197 91 72 chr10 13677962 13678282 -131911006 - L1MB5 LINE L1 0 6174 5849 2306 107 0 0 chr10 13678981 13679279 -131910009 - AluSx SINE Alu -14 298 1 1402 128 55 5 chr10 13679533 13679752 -131909536 + MER30 DNA MER1_type 1 230 0 598 248 159 50 chr10 13679939 13680058 -131909230 - L1ME4a LINE L1 -3 6118 6013 1874 163 7 14 chr10 13680058 13680352 -131908936 + AluJb SINE Alu 1 292 -20 598 248 159 50 chr10 13680352 13680736 -131908552 - L1ME4a LINE L1 -108 6013 5560 766 40 30 0 chr10 13681110 13681209 -131908079 + L1PB1 LINE L1 6012 6113 -38 261 0 0 0 chr10 13681220 13681249 -131908039 + (CAAG)n Simple_repeat Simple_repeat 2 30 0 29 47 0 0 chr10 13681535 13681578 -131907710 + AT_rich Low_complexity Low_complexity 1 43 0 1369 205 0 4 chr10 13682531 13682780 -131906508 - AluJb SINE Alu -1 311 64 22 0 0 0 chr10 13682953 13682975 -131906313 + AT_rich Low_complexity Low_complexity 1 22 0 335 186 0 0 chr10 13683650 13683709 -131905579 + MIR3 SINE MIR 114 172 -36 1790 178 3 0 chr10 13683743 13684036 -131905252 + AluJb SINE Alu 6 299 -13 1151 133 6 0 chr10 13684057 13684223 -131905065 + AluSg/x SINE Alu 137 303 -9 24 0 0 0 chr10 13684939 13684963 -131904325 + AT_rich Low_complexity Low_complexity 1 24 0 2233 108 0 0 chr10 13684963 13685251 -131904037 - AluSx SINE Alu -24 288 1 278 223 127 85 chr10 13685281 13685351 -131903937 - MIR SINE MIR -55 207 141 1556 205 19 3 chr10 13685351 13685658 -131903630 - AluJo SINE Alu 0 312 1 278 223 127 85 chr10 13685658 13685751 -131903537 - MIR SINE MIR -121 141 35 2116 104 11 0 chr10 13686356 13686635 -131902653 - AluSc SINE Alu -13 296 15 2181 117 0 0 chr10 13687330 13687630 -131901658 - AluSx SINE Alu -9 303 4 969 203 107 26 chr10 13687938 13688248 -131901040 - MER20B DNA MER1_type 0 783 449 592 156 0 0 chr10 13688308 13688398 -131900890 - FLAM_A SINE Alu -28 114 25 911 135 172 0 chr10 13688429 13688592 -131900696 - AluJo SINE Alu -17 295 105 697 294 85 14 chr10 13688595 13688877 -131900411 - MER20B DNA MER1_type -447 336 35 2015 136 10 7 chr10 13689300 13689608 -131899680 + AluSx SINE Alu 1 309 -3 2008 156 7 0 chr10 13690514 13690822 -131898466 + AluJo SINE Alu 1 310 -2 726 214 129 102 chr10 13691200 13691282 -131898006 - MLT1D LTR MaLR -4 501 423 2195 123 0 0 chr10 13691282 13691582 -131897706 - AluSx SINE Alu -12 300 1 726 214 129 102 chr10 13691582 13691971 -131897317 - MLT1D LTR MaLR -82 423 17 392 246 82 0 chr10 13692947 13693057 -131896231 + L2 LINE L2 3154 3272 0 1263 130 10 43 chr10 13693187 13693395 -131895893 + MER2 DNA MER2_type 6 206 -139 525 71 0 0 chr10 13693421 13693491 -131895797 + (TA)n Simple_repeat Simple_repeat 2 71 0 4185 127 45 4 chr10 13693493 13694176 -131895112 - L1PB4 LINE L1 -7 6149 5439 1827 141 26 26 chr10 13695236 13695542 -131893746 - AluJo SINE Alu -6 306 1 950 239 47 0 chr10 13695558 13695771 -131893517 - MER58A DNA MER1_type 0 224 2 2760 84 11 0 chr10 13695938 13696295 -131892993 + THE1B LTR MaLR 1 361 -3 1800 146 7 16 chr10 13696539 13696848 -131892440 + AluJb SINE Alu 1 306 -6 913 126 0 15 chr10 13696885 13697020 -131892268 + FLAM_C SINE Alu 1 133 0 403 284 18 18 chr10 13698148 13698257 -131891031 + MIR3 SINE MIR 89 197 -11 1563 169 0 4 chr10 13698483 13698755 -131890533 - AluJb SINE Alu -4 308 38 2153 121 0 0 chr10 13699659 13699966 -131889322 - AluSx SINE Alu -5 307 1 1186 117 0 0 chr10 13700675 13700838 -131888450 + AluSx SINE Alu 1 163 -149 952 106 28 0 chr10 13700926 13701067 -131888221 - AluSg/x SINE Alu -17 295 151 2953 198 108 25 chr10 13701077 13701718 -131887570 - L1ME2 LINE L1 -1 6163 5448 3076 115 27 0 chr10 13701718 13702160 -131887128 - LTR22A LTR ERVK -4 454 1 2953 198 108 25 chr10 13702160 13702276 -131887012 - L1ME2 LINE L1 -716 5448 5343 8154 131 80 14 chr10 13702309 13703165 -131886123 + Tigger1 DNA MER2_type 24 1003 -1415 1773 121 0 11 chr10 13703165 13703437 -131885851 - AluSx SINE Alu -14 298 30 8154 131 80 14 chr10 13703437 13703936 -131885352 + Tigger1 DNA MER2_type 1003 1468 -950 1978 134 3 3 chr10 13703937 13704243 -131885045 - AluSx SINE Alu -6 306 1 2712 7 0 0 chr10 13704453 13704754 -131884534 - AluYb8 SINE Alu -17 301 1 24 53 0 0 chr10 13705478 13705516 -131883772 + AT_rich Low_complexity Low_complexity 1 38 0 24 53 0 0 chr10 13705539 13705577 -131883711 + AT_rich Low_complexity Low_complexity 1 38 0 1010 0 0 0 chr10 13705704 13705811 -131883477 + U6 snRNA snRNA 1 107 0 8104 13 0 0 chr10 13705811 13707136 -131882152 + L1HS LINE L1 4831 6155 0 309 89 0 0 chr10 13707136 13707181 -131882107 + (A)n Simple_repeat Simple_repeat 1 45 0 1764 161 3 3 chr10 13707429 13707720 -131881568 - AluJo SINE Alu -21 291 1 981 182 0 0 chr10 13709027 13709203 -131880085 - FRAM SINE Alu 0 176 1 1786 169 10 0 chr10 13709625 13709926 -131879362 + AluJb SINE Alu 1 304 -8 226 208 0 0 chr10 13709927 13709980 -131879308 - L1MC4 LINE L1 -1342 6700 6648 1345 174 95 11 chr10 13711114 13711378 -131877910 - AluJb SINE Alu 0 312 27 1443 136 0 5 chr10 13711378 13711591 -131877697 + AluSx SINE Alu 1 212 -100 1932 206 49 37 chr10 13711723 13712024 -131877264 + L1MB4 LINE L1 5640 5951 -229 1893 126 27 0 chr10 13712024 13712317 -131876971 - AluSx SINE Alu -11 301 1 1932 206 49 37 chr10 13712317 13712505 -131876783 + L1MB4 LINE L1 5951 6135 -45 1737 162 3 10 chr10 13712508 13712804 -131876484 + AluJo SINE Alu 2 295 -17 337 149 0 27 chr10 13712833 13712907 -131876381 + (GAAA)n Simple_repeat Simple_repeat 4 75 0 1171 164 176 0 chr10 13713521 13713765 -131875523 - AluJo SINE Alu -8 304 18 2175 90 3 0 chr10 13713858 13714159 -131875129 + AluSx SINE Alu 1 302 -10 192 291 58 48 chr10 13714541 13714644 -131874644 + MIR SINE MIR 20 123 -139 1369 143 92 31 chr10 13714644 13714938 -131874350 - AluJo SINE Alu 0 312 1 820 168 0 0 chr10 13714958 13715089 -131874199 - FLAM_C SINE Alu -11 132 2 1963 147 10 0 chr10 13715901 13716208 -131873080 + AluSx SINE Alu 1 310 -2 333 0 0 0 chr10 13716209 13716246 -131873042 + (CA)n Simple_repeat Simple_repeat 2 38 0 1735 145 0 7 chr10 13716521 13716790 -131872498 - AluSx SINE Alu -8 304 38 2126 116 0 0 chr10 13717377 13717701 -131871587 - AluSq SINE Alu 0 313 1 1421 133 46 0 chr10 13717774 13717992 -131871296 + AluSg/x SINE Alu 74 301 -9 330 263 132 9 chr10 13718335 13718449 -131870839 - MIR3 SINE MIR -12 196 69 223 322 67 0 chr10 13718534 13718624 -131870664 - L2 LINE L2 -3 3269 3174 917 198 0 0 chr10 13718626 13718793 -131870495 + FRAM SINE Alu 1 166 -10 1934 100 35 7 chr10 13719240 13719530 -131869758 + AluSx SINE Alu 1 298 -14 299 276 75 37 chr10 13719805 13719939 -131869349 - MIR3 SINE MIR -65 143 5 2059 125 7 0 chr10 13720559 13720863 -131868425 + AluSx SINE Alu 1 306 -6 267 278 139 28 chr10 13721456 13721564 -131867724 - MIR SINE MIR -69 139 20 210 182 55 0 chr10 13722450 13722505 -131866783 + T-rich Low_complexity Low_complexity 2 59 0 1990 92 0 21 chr10 13723396 13723713 -131865575 + AluSx SINE Alu 8 318 0 2212 58 41 10 chr10 13723733 13724027 -131865261 + AluY SINE Alu 1 303 -8 734 142 0 37 chr10 13724382 13724516 -131864772 + FLAM_C SINE Alu 2 130 -3 2113 121 0 0 chr10 13724521 13724818 -131864470 + AluSx SINE Alu 1 297 -15 2226 118 0 0 chr10 13724818 13725131 -131864157 + AluSq SINE Alu 1 313 0 225 203 0 68 chr10 13725539 13725598 -131863690 - L2 LINE L2 -13 3259 3205 2044 122 3 3 chr10 13725633 13725936 -131863352 + AluSx SINE Alu 1 303 -9 699 153 25 0 chr10 13725936 13726054 -131863234 - AluSq/x SINE Alu -191 122 2 2040 96 34 0 chr10 13726460 13726579 -131862709 + AluSg SINE Alu 1 114 -196 279 0 0 0 chr10 13726579 13726610 -131862678 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2040 96 34 0 chr10 13726610 13726781 -131862507 + AluSg SINE Alu 114 301 -9 265 322 98 51 chr10 13726784 13727079 -131862209 + L2 LINE L2 2323 2631 -683 547 295 156 9 chr10 13727184 13727408 -131861880 - MIR SINE MIR -5 257 1 331 134 15 30 chr10 13727693 13727760 -131861528 - L1MB8 LINE L1 -2 6176 6111 1230 89 6 0 chr10 13727760 13727928 -131861360 + AluSx SINE Alu 1 169 -143 2980 160 16 25 chr10 13727955 13728262 -131861026 - L1MB8 LINE L1 -53 6125 5824 2225 108 0 0 chr10 13728262 13728567 -131860721 - AluSq SINE Alu -7 306 2 2980 160 16 25 chr10 13728567 13728815 -131860473 - L1MB8 LINE L1 -354 5824 5575 1964 114 24 0 chr10 13728816 13729106 -131860182 - AluSx SINE Alu -15 297 1 240 264 217 19 chr10 13729138 13729244 -131860044 + L2 LINE L2 3138 3264 -8 723 142 4 177 chr10 13729433 13729553 -131859735 + MER67D LTR ERV1 1 66 -448 1577 169 0 43 chr10 13729553 13729878 -131859410 + AluJo SINE Alu 1 311 -1 723 142 4 177 chr10 13729878 13729983 -131859305 + MER67D LTR ERV1 66 187 -327 1668 151 3 20 chr10 13730002 13730294 -131858994 - AluJo SINE Alu -25 287 1 276 122 0 0 chr10 13730295 13730336 -131858952 + MER67D LTR ERV1 446 486 -28 1528 163 6 47 chr10 13730546 13730693 -131858595 + AluJo SINE Alu 1 152 -160 2059 113 3 0 chr10 13730693 13731036 -131858252 + AluSp SINE Alu 1 344 0 1528 163 6 47 chr10 13731036 13731207 -131858081 + AluJo SINE Alu 152 307 -5 2296 97 0 0 chr10 13731463 13731772 -131857516 - AluSg SINE Alu -1 309 1 1980 130 0 0 chr10 13732402 13732726 -131856562 + AluSx SINE Alu 1 324 0 1361 151 7 75 chr10 13733574 13733685 -131855603 + AluJo SINE Alu 42 159 -153 1732 157 13 0 chr10 13733685 13733984 -131855304 + AluJb SINE Alu 1 303 -9 2291 72 0 23 chr10 13733984 13734289 -131854999 + AluY SINE Alu 1 298 -13 1361 151 7 75 chr10 13734289 13734455 -131854833 + AluJo SINE Alu 157 301 -11 438 212 15 3 chr10 13734455 13734587 -131854701 + AluJ/FRAM SINE Alu 134 312 0 381 303 42 8 chr10 13734590 13734709 -131854579 - MER5B DNA MER1_type -55 123 1 2125 110 0 3 chr10 13734763 13735062 -131854226 + AluSx SINE Alu 1 298 -14 2114 115 3 0 chr10 13735123 13735427 -131853861 - AluSx SINE Alu -7 305 1 548 141 38 169 chr10 13736432 13736616 -131852672 - MER103 DNA DNA -1 165 6 2265 146 22 0 chr10 13736746 13737102 -131852186 - THE1B LTR MaLR 0 364 1 2303 94 0 0 chr10 13737187 13737494 -131851794 - AluSq SINE Alu -6 307 1 2129 120 3 0 chr10 13737711 13738011 -131851277 - AluSx SINE Alu -11 301 1 1680 141 52 10 chr10 13738422 13738712 -131850576 + AluSx SINE Alu 7 308 -4 348 80 0 0 chr10 13738748 13738798 -131850490 - FLAM_A SINE Alu 0 133 84 1353 173 94 0 chr10 13739312 13739425 -131849863 + AluJb SINE Alu 1 102 -210 189 0 0 0 chr10 13739425 13739446 -131849842 + (CAAT)n Simple_repeat Simple_repeat 4 24 0 1353 173 94 0 chr10 13739446 13739587 -131849701 + AluJb SINE Alu 102 279 -33 233 29 29 0 chr10 13739587 13739621 -131849667 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 1824 162 0 0 chr10 13739632 13739934 -131849354 + AluSx SINE Alu 7 308 -4 696 243 201 36 chr10 13740096 13740355 -131848933 - L1M4 LINE L1 -756 5390 5175 1496 168 10 45 chr10 13740355 13740647 -131848641 - AluJb SINE Alu -24 288 7 696 243 201 36 chr10 13740647 13740865 -131848423 - L1M4 LINE L1 -971 5175 4834 3067 199 71 161 chr10 13741061 13741222 -131848066 - L1M4 LINE L1 -1334 4812 4638 2073 98 3 19 chr10 13741222 13741529 -131847759 - AluSx SINE Alu -10 302 1 3067 199 71 161 chr10 13741529 13742510 -131846778 - L1M4 LINE L1 -1508 4638 3570 1115 191 9 27 chr10 13742510 13742735 -131846553 - AluJo SINE Alu -91 221 1 3067 199 71 161 chr10 13742735 13743146 -131846142 - L1M4 LINE L1 -2576 3570 3216 2144 135 0 0 chr10 13743146 13743458 -131845830 + AluSx SINE Alu 1 312 0 3067 199 71 161 chr10 13743458 13743591 -131845697 - L1M4 LINE L1 -2930 3216 3073 286 132 57 0 chr10 13743594 13743647 -131845641 - L1M4 LINE L1 -3237 2909 2854 243 169 247 26 chr10 13743745 13743822 -131845466 - L1M4 LINE L1 -3269 2877 2784 1852 190 37 16 chr10 13743827 13744201 -131845087 - MSTD LTR MaLR 0 396 15 205 182 0 23 chr10 13744209 13744253 -131845035 + (CTTAT)n Simple_repeat Simple_repeat 2 44 0 381 188 24 0 chr10 13744260 13744345 -131844943 - L1M4 LINE L1 -3367 2779 2693 2232 220 69 62 chr10 13744423 13745277 -131844011 - Charlie2 DNA MER1_type -28 2834 1975 180 112 34 56 chr10 13745307 13745396 -131843892 + (TATAA)n Simple_repeat Simple_repeat 2 88 0 400 241 260 49 chr10 13745396 13745509 -131843779 - Charlie2 DNA MER1_type -874 1988 1900 1587 186 3 10 chr10 13745509 13745805 -131843483 - AluJb SINE Alu -18 294 1 400 241 260 49 chr10 13745805 13745905 -131843383 - Charlie2 DNA MER1_type -962 1900 1822 2275 88 0 0 chr10 13745905 13746202 -131843086 - AluSx SINE Alu -15 297 1 400 241 260 49 chr10 13746202 13746414 -131842874 - Charlie2 DNA MER1_type -1040 1822 1472 273 282 48 10 chr10 13746461 13746564 -131842724 - Charlie2b DNA MER1_type -2099 683 577 306 102 0 0 chr10 13746665 13746714 -131842574 - L1MB4 LINE L1 -1 6179 6131 1880 112 0 14 chr10 13746714 13746990 -131842298 - AluSx SINE Alu -17 295 24 713 191 101 14 chr10 13747020 13747298 -131841990 + HERV9 LTR ERV1 840 1141 -5755 321 194 0 0 chr10 13747296 13747358 -131841930 + HERV9 LTR ERV1 7503 7564 -835 * 7384 105 31 30 chr10 13747354 13749088 -131840200 + pTR5 LTR ERV1 504 8399 0 359 233 29 19 chr10 13749088 13749191 -131840097 + LTR30 LTR ERV1 539 642 -80 1279 109 62 0 chr10 13749192 13749385 -131839903 + LTR12 LTR ERV1 377 581 -133 248 88 0 0 chr10 13749385 13749419 -131839869 - AluSx SINE Alu -268 34 1 1738 145 66 7 chr10 13749419 13749723 -131839565 - L1MB3 LINE L1 -45 6138 5817 1811 153 0 11 chr10 13749723 13750010 -131839278 + AluJb SINE Alu 1 284 -28 1408 137 5 0 chr10 13750174 13750385 -131838903 + AluSx SINE Alu 1 212 -100 469 554 56 5 chr10 13750385 13750593 -131838695 + AluJb SINE Alu 78 297 -11 1971 104 11 11 chr10 13750593 13750872 -131838416 - AluSg SINE Alu -31 279 1 501 253 105 102 chr10 13750952 13751304 -131837984 + MLT1L LTR MaLR 42 394 -221 365 194 61 10 chr10 13751331 13751429 -131837859 + MLT1L LTR MaLR 505 607 -8 2150 114 0 0 chr10 13751449 13751747 -131837541 - AluSx SINE Alu -14 298 1 421 286 34 8 chr10 13752176 13752295 -131836993 + L2 LINE L2 3183 3304 -9 1775 149 3 3 chr10 13752854 13753168 -131836120 - AluJb SINE Alu 0 314 1 1585 146 39 11 chr10 13753465 13753745 -131835543 - AluJo SINE Alu -24 288 1 2142 90 0 3 chr10 13754255 13754544 -131834744 + AluY SINE Alu 1 288 -23 1859 159 27 24 chr10 13754700 13755046 -131834242 - L1MB3 LINE L1 -7 6176 5827 2090 96 3 7 chr10 13755046 13755338 -131833950 - AluSx SINE Alu -11 301 11 1859 159 27 24 chr10 13755338 13755361 -131833927 - L1MB3 LINE L1 -356 5827 5806 2124 123 0 3 chr10 13755582 13755891 -131833397 + AluSx SINE Alu 1 308 -4 1618 125 0 4 chr10 13756078 13756318 -131832970 - AluSx SINE Alu -73 239 1 501 329 14 7 chr10 13756323 13756469 -131832819 - MIR SINE MIR -110 152 6 2338 149 0 13 chr10 13757020 13757396 -131831892 + L1PA16 LINE L1 5699 6069 -97 3154 115 23 6 chr10 13757402 13757881 -131831407 - LTR15 LTR ERV1 -6 487 1 423 129 75 32 chr10 13757881 13757974 -131831314 + L1PA16 LINE L1 6066 6162 -4 2154 110 0 10 chr10 13757985 13758295 -131830993 + AluSc SINE Alu 1 307 -2 2070 132 63 16 chr10 13758313 13758416 -131830872 + MLT1B LTR MaLR 11 108 -282 2255 130 38 78 chr10 13758416 13758457 -131830831 - MSTA LTR MaLR 0 428 387 1894 134 3 10 chr10 13758457 13758763 -131830525 + AluSx SINE Alu 1 304 -8 2255 130 38 78 chr10 13758763 13758933 -131830355 - MSTA LTR MaLR -41 387 212 2119 122 0 0 chr10 13758933 13759237 -131830051 + AluSx SINE Alu 1 304 -8 2255 130 38 78 chr10 13759237 13759470 -131829818 - MSTA LTR MaLR -216 212 1 2070 132 63 16 chr10 13759470 13759729 -131829559 + MLT1B LTR MaLR 108 390 0 469 247 119 50 chr10 13759750 13759969 -131829319 + MER112 DNA MER1_type 2 235 -25 956 202 24 24 chr10 13760995 13761208 -131828080 + MER58A DNA MER1_type 3 215 -9 798 178 39 77 chr10 13761604 13761812 -131827476 + L1MC3 LINE L1 6689 6862 -923 1694 119 35 35 chr10 13761841 13762126 -131827162 + AluJo SINE Alu 11 295 -17 2168 92 0 0 chr10 13762337 13762649 -131826639 + AluSx SINE Alu 1 312 0 2541 39 0 0 chr10 13762866 13763172 -131826116 - AluY SINE Alu -5 306 1 980 63 0 0 chr10 13763452 13763579 -131825709 + AluSg/x SINE Alu 180 306 -6 305 272 68 0 chr10 13764036 13764139 -131825149 + L1MC/D LINE L1 5364 5473 -860 677 211 8 8 chr10 13764143 13764276 -131825012 + FLAM_C SINE Alu 1 133 0 2225 53 3 3 chr10 13764284 13764589 -131824699 + AluY SINE Alu 1 305 0 2145 114 0 0 chr10 13764995 13765302 -131823986 + AluSx SINE Alu 1 307 -5 2089 111 3 43 chr10 13766004 13766329 -131822959 - AluSx SINE Alu 0 312 1 1714 128 38 35 chr10 13767176 13767464 -131821824 - AluSx SINE Alu -23 289 1 2112 113 3 0 chr10 13767630 13767923 -131821365 - AluSq SINE Alu -19 294 1 2207 88 3 0 chr10 13768596 13768892 -131820396 - AluY SINE Alu -14 297 1 1471 165 17 37 chr10 13768975 13769272 -131820016 - AluJb SINE Alu -21 291 1 1692 173 0 16 chr10 13770590 13770902 -131818386 + AluJo SINE Alu 3 309 -3 1946 151 0 3 chr10 13770933 13771244 -131818044 + AluSx SINE Alu 1 310 -2 695 187 0 70 chr10 13771348 13771535 -131817753 - MER96B DNA MER1_type? -243 174 1 838 167 0 0 chr10 13771611 13771743 -131817545 - FLAM_C SINE Alu 0 133 2 2441 50 7 3 chr10 13771755 13772058 -131817230 - AluY SINE Alu -7 304 1 203 197 16 16 chr10 13772207 13772268 -131817020 + (CAATT)n Simple_repeat Simple_repeat 5 65 0 1787 159 3 13 chr10 13772670 13772979 -131816309 + AluJb SINE Alu 1 306 -6 2010 128 0 0 chr10 13773806 13774111 -131815177 - AluSx SINE Alu 0 307 3 2254 91 7 0 chr10 13774226 13774533 -131814755 - AluSp SINE Alu -4 309 1 1535 155 4 15 chr10 13774540 13774804 -131814484 - AluJo SINE Alu -15 297 37 1083 218 130 53 chr10 13774971 13775063 -131814225 + L1ME2 LINE L1 5750 5834 -330 2040 99 45 0 chr10 13775063 13775355 -131813933 + AluSc SINE Alu 1 305 -4 1083 218 130 53 chr10 13775355 13775639 -131813649 + L1ME2 LINE L1 5834 6155 -9 1505 183 4 0 chr10 13775687 13775960 -131813328 + AluSc SINE Alu 1 274 -35 245 27 54 0 chr10 13775963 13776000 -131813288 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1502 150 0 0 chr10 13776524 13776758 -131812530 + AluSx SINE Alu 1 234 -78 1463 137 36 104 chr10 13777202 13777348 -131811940 + AluJo SINE Alu 1 155 -157 223 26 77 0 chr10 13777348 13777387 -131811901 + A-rich Low_complexity Low_complexity 2 43 0 1463 137 36 104 chr10 13777387 13777575 -131811713 + AluJo SINE Alu 155 312 0 2484 52 0 0 chr10 13777815 13778122 -131811166 - AluY SINE Alu -4 307 1 2053 119 3 25 chr10 13778277 13778596 -131810692 + AluSx SINE Alu 1 312 0 2002 104 0 70 chr10 13778613 13778940 -131810348 + AluSx SINE Alu 1 304 -8 473 165 24 0 chr10 13779236 13779321 -131809967 - FLAM_A SINE Alu -55 87 1 213 276 126 11 chr10 13779325 13779412 -131809876 - MER5A DNA MER1_type -38 151 55 2320 89 0 22 chr10 13779438 13779754 -131809534 + AluSp SINE Alu 1 309 -4 192 77 0 0 chr10 13780092 13780118 -131809170 + (TTTTG)n Simple_repeat Simple_repeat 3 28 0 1370 184 25 11 chr10 13780126 13780404 -131808884 - AluJo SINE Alu -30 282 1 2139 128 0 0 chr10 13781276 13781588 -131807700 + AluSq SINE Alu 1 312 -1 2110 87 44 0 chr10 13781915 13782213 -131807075 - AluY SINE Alu 0 311 1 2277 97 0 0 chr10 13782216 13782524 -131806764 - AluSg SINE Alu -2 308 1 1950 78 13 72 chr10 13782621 13782957 -131806331 - AluSp SINE Alu 0 313 7 906 134 0 0 chr10 13784168 13784295 -131804993 - FLAM_C SINE Alu -16 127 1 1966 110 48 0 chr10 13784517 13784808 -131804480 + AluSx SINE Alu 1 305 -7 848 0 20 0 chr10 13784871 13784970 -131804318 - L1PA4 LINE L1 0 6155 6055 285 304 71 42 chr10 13784970 13785133 -131804155 - MER5A DNA MER1_type -5 184 17 1732 139 14 14 chr10 13785176 13785464 -131803824 - AluSx SINE Alu -24 288 1 180 0 0 0 chr10 13785680 13785700 -131803588 + (A)n Simple_repeat Simple_repeat 1 20 0 25 0 0 0 chr10 13786363 13786388 -131802900 + AT_rich Low_complexity Low_complexity 1 25 0 21 57 0 0 chr10 13786606 13786641 -131802647 + AT_rich Low_complexity Low_complexity 1 35 0 1637 171 32 0 chr10 13787784 13788065 -131801223 - AluJo SINE Alu -22 290 1 2177 82 7 7 chr10 13788473 13788766 -131800522 - AluY SINE Alu -16 295 3 3252 134 39 19 chr10 13789027 13789190 -131800098 - MER1A DNA MER1_type -2174 526 368 2199 105 3 0 chr10 13789190 13789495 -131799793 + AluSp SINE Alu 1 306 -7 3252 134 39 19 chr10 13789495 13789847 -131799441 - MER1A DNA MER1_type -2332 368 1 1748 191 41 26 chr10 13790423 13790768 -131798520 - MLT1A1 LTR MaLR -12 353 4 2109 110 0 10 chr10 13792172 13792472 -131796816 - AluSx SINE Alu -4 308 12 474 160 13 0 chr10 13792613 13792688 -131796600 - FLAM_C SINE Alu -34 109 34 27 29 0 0 chr10 13792780 13792814 -131796474 + AT_rich Low_complexity Low_complexity 1 34 0 2121 113 0 0 chr10 13792877 13793179 -131796109 + AluSg SINE Alu 1 302 -8 523 93 0 0 chr10 13793235 13793310 -131795978 - AluJ/FLAM SINE Alu -236 76 2 1070 226 16 8 chr10 13793805 13794016 -131795272 - MIR SINE MIR 0 262 47 1476 145 71 25 chr10 13794016 13794298 -131794990 + AluJo SINE Alu 3 297 -15 1070 226 16 8 chr10 13794298 13794334 -131794954 - MIR SINE MIR -215 47 13 802 181 0 0 chr10 13794610 13794737 -131794551 + AluJb SINE Alu 2 128 -184 470 95 0 0 chr10 13794737 13794800 -131794488 + AluJ/FRAM SINE Alu 233 295 -17 228 272 174 42 chr10 13794818 13794838 -131794450 + L1ME4a LINE L1 5582 5598 -523 2006 141 0 0 chr10 13794838 13795150 -131794138 + AluSx SINE Alu 1 312 0 228 272 174 42 chr10 13795150 13795266 -131794022 + L1ME4a LINE L1 5598 5697 -424 1934 114 52 3 chr10 13795266 13795555 -131793733 + AluSx SINE Alu 1 303 -9 228 272 174 42 chr10 13795555 13795630 -131793658 + L1ME4a LINE L1 5697 5822 -299 1855 82 26 0 chr10 13795654 13795923 -131793365 + AluY SINE Alu 6 320 0 265 77 0 0 chr10 13795923 13795962 -131793326 + (TAAAA)n Simple_repeat Simple_repeat 2 105 0 22 0 0 0 chr10 13795979 13796001 -131793287 + AT_rich Low_complexity Low_complexity 1 22 0 315 179 16 122 chr10 13796023 13796146 -131793142 + L1ME4a LINE L1 5959 6068 -53 1804 130 0 27 chr10 13796417 13796732 -131792556 - AluSx SINE Alu 0 307 1 500 270 91 25 chr10 13796917 13797158 -131792130 - AluY SINE Alu -52 259 3 1749 103 60 18 chr10 13797255 13797537 -131791751 + AluSq SINE Alu 1 294 -19 305 226 104 35 chr10 13797582 13797697 -131791591 - L2 LINE L2 0 3313 3191 274 267 53 80 chr10 13797853 13797945 -131791343 + MER5B DNA MER1_type 30 118 -60 2045 78 57 3 chr10 13797945 13798228 -131791060 - AluSg SINE Alu -12 298 1 274 267 53 80 chr10 13798228 13798285 -131791003 + MER5B DNA MER1_type 118 175 -3 342 245 19 28 chr10 13798662 13798768 -131790520 + LTR16B LTR ERVL 317 421 -43 1947 145 0 13 chr10 13798832 13799143 -131790145 - AluSx SINE Alu -5 307 1 2168 109 0 0 chr10 13800056 13800350 -131788938 - AluSg SINE Alu -16 294 1 813 173 67 0 chr10 13800433 13800583 -131788705 - FRAM SINE Alu -6 170 11 296 151 0 0 chr10 13800584 13800637 -131788651 - L1M4 LINE L1 -364 5810 5758 325 186 0 0 chr10 13800686 13800756 -131788532 - L1MC2 LINE L1 0 6344 6275 2972 153 29 31 chr10 13800758 13801314 -131787974 - L1MC2 LINE L1 -313 6031 5477 1420 99 5 19 chr10 13801318 13801531 -131787757 - AluJb SINE Alu -22 290 81 1316 213 44 6 chr10 13801532 13802004 -131787284 - L1MC2 LINE L1 -755 5391 4995 1837 142 49 28 chr10 13802006 13802330 -131786958 + THE1C LTR MaLR 3 333 -42 2113 72 61 3 chr10 13802330 13802623 -131786665 + AluSg SINE Alu 1 310 0 180 0 0 0 chr10 13802660 13802680 -131786608 + (TAA)n Simple_repeat Simple_repeat 2 21 0 254 125 104 0 chr10 13802688 13802736 -131786552 + THE1C LTR MaLR 308 360 -4 852 202 19 47 chr10 13802738 13802891 -131786397 - L1MC2 LINE L1 -1146 5000 4853 2174 105 0 0 chr10 13802891 13803187 -131786101 + AluSg SINE Alu 1 296 -14 852 202 19 47 chr10 13803187 13803246 -131786042 - L1MC2 LINE L1 -1293 4853 4794 1499 160 71 18 chr10 13803248 13803530 -131785758 - AluJb SINE Alu -15 297 1 382 236 67 98 chr10 13803539 13803665 -131785623 + L1ME4a LINE L1 5714 5842 -279 2015 120 0 10 chr10 13803665 13803965 -131785323 + AluSx SINE Alu 13 309 -3 382 236 67 98 chr10 13803965 13804257 -131785031 + L1ME4a LINE L1 5842 6119 -2 1406 97 5 0 chr10 13804532 13804728 -131784560 - AluSp SINE Alu -13 300 104 524 161 0 0 chr10 13804728 13804815 -131784473 + AluJ SINE Alu 48 134 -178 1512 98 91 58 chr10 13805153 13805287 -131784001 + AluSx SINE Alu 1 129 -218 2119 113 0 0 chr10 13805287 13805578 -131783710 + AluSx SINE Alu 1 291 -21 594 41 0 0 chr10 13805578 13805651 -131783637 + (CTA)n Simple_repeat Simple_repeat 1 73 0 1512 98 91 58 chr10 13805651 13805853 -131783435 + AluSx SINE Alu 128 347 0 875 152 76 18 chr10 13805856 13806027 -131783261 + AluJ SINE Alu 131 311 -1 664 88 10 49 chr10 13807129 13807231 -131782057 - AluJo SINE Alu -12 300 203 * 757 120 88 0 chr10 13807227 13807352 -131781936 - AluJo SINE Alu -173 139 4 191 302 94 9 chr10 13807397 13807503 -131781785 - MIR3 SINE MIR -83 125 11 2044 83 4 0 chr10 13807567 13807871 -131781417 + AluSg SINE Alu 2 306 0 1571 106 32 39 chr10 13807878 13808201 -131781087 + AluY SINE Alu 1 321 0 971 206 123 0 chr10 13808202 13808455 -131780833 + LTR2 LTR ERV1 163 446 -3 728 144 8 0 chr10 13808455 13808580 -131780708 + AluJb SINE Alu 187 312 0 25 0 0 0 chr10 13808604 13808629 -131780659 + AT_rich Low_complexity Low_complexity 1 25 0 2011 68 54 4 chr10 13809483 13809763 -131779525 + AluY SINE Alu 1 294 -17 2139 89 16 3 chr10 13809968 13810272 -131779016 - AluSx SINE Alu -4 308 1 28 29 0 0 chr10 13810498 13810533 -131778755 + AT_rich Low_complexity Low_complexity 1 35 0 1945 125 0 46 chr10 13810868 13811195 -131778093 + AluSq SINE Alu 1 312 -1 924 178 26 5 chr10 13811214 13811405 -131777883 + AluJb SINE Alu 118 312 0 1476 160 32 14 chr10 13811416 13811698 -131777590 + AluJo SINE Alu 1 287 -25 1813 120 7 7 chr10 13811723 13811998 -131777290 + AluSg SINE Alu 1 275 -35 186 43 0 0 chr10 13812001 13812024 -131777264 + (TAA)n Simple_repeat Simple_repeat 2 24 0 1079 155 0 73 chr10 13812173 13812310 -131776978 + AluJo SINE Alu 12 131 -181 2052 102 28 0 chr10 13812310 13812593 -131776695 + AluSx SINE Alu 1 291 -21 1079 155 0 73 chr10 13812593 13812661 -131776627 + AluJo SINE Alu 131 202 -110 387 182 0 0 chr10 13813122 13813199 -131776089 + (CA)n Simple_repeat Simple_repeat 1 77 0 2113 73 4 0 chr10 13813383 13813656 -131775632 - AluSp SINE Alu -13 300 27 1370 160 93 19 chr10 13813835 13814103 -131775185 + AluJo SINE Alu 1 288 -24 23 78 0 0 chr10 13814103 13814154 -131775134 + AT_rich Low_complexity Low_complexity 1 51 0 461 283 68 72 chr10 13814163 13814414 -131774874 - L1ME4a LINE L1 -4 6117 5868 375 250 85 98 chr10 13814393 13814421 -131774867 - L1ME4a LINE L1 -1 6120 6093 * 2354 90 3 0 chr10 13814421 13814733 -131774555 + AluSp SINE Alu 1 313 0 375 250 85 98 chr10 13814733 13814928 -131774360 - L1ME4a LINE L1 -28 6093 5900 2380 50 3 7 chr10 13815523 13815824 -131773464 + AluY SINE Alu 11 310 -1 1100 153 6 0 chr10 13815827 13816010 -131773278 + AluSg/x SINE Alu 127 310 0 1510 156 31 31 chr10 13816014 13816303 -131772985 + AluJb SINE Alu 2 290 -22 366 252 165 81 chr10 13816310 13816419 -131772869 - L1ME4a LINE L1 -174 5947 5848 2044 122 3 0 chr10 13816419 13816722 -131772566 - AluSx SINE Alu -8 304 1 366 252 165 81 chr10 13816722 13817035 -131772253 - L1ME4a LINE L1 -273 5848 5472 2252 81 3 13 chr10 13817035 13817342 -131771946 - AluSp SINE Alu -9 304 1 366 252 165 81 chr10 13817342 13817434 -131771854 - L1ME4a LINE L1 -649 5472 5389 249 296 25 12 chr10 13817488 13817569 -131771719 - MLT1I LTR MaLR -2 407 326 2723 111 27 11 chr10 13817805 13818280 -131771008 + MER1A DNA MER1_type 1 528 -1 2269 98 0 0 chr10 13818423 13818730 -131770558 + AluSg SINE Alu 2 308 -2 2350 84 3 0 chr10 13818744 13819055 -131770233 + AluSp SINE Alu 1 312 -1 2388 77 3 0 chr10 13819064 13819376 -131769912 + AluSp SINE Alu 1 313 0 2188 105 0 0 chr10 13819385 13819689 -131769599 + AluSq SINE Alu 1 304 -9 925 165 31 36 chr10 13819920 13820114 -131769174 + MLT1D LTR MaLR 1 176 -329 242 227 140 53 chr10 13820002 13820139 -131769149 + MLT2C1 LTR ERVL 84 236 -161 * 1656 168 3 3 chr10 13820139 13820449 -131768839 + AluSx SINE Alu 1 310 -2 242 227 140 53 chr10 13820449 13820461 -131768827 + MLT2C1 LTR ERVL 236 246 -151 2210 43 46 4 chr10 13820515 13820796 -131768492 - AluY SINE Alu -18 293 1 2277 97 0 0 chr10 13820799 13821107 -131768181 - AluSg SINE Alu -2 308 1 1956 79 13 69 chr10 13821204 13821539 -131767749 - AluSp SINE Alu 0 313 7 881 142 0 0 chr10 13822750 13822877 -131766411 - FLAM_C SINE Alu -16 127 1 1924 112 49 0 chr10 13823099 13823385 -131765903 + AluSx SINE Alu 1 300 -12 837 10 10 0 chr10 13823449 13823549 -131765739 - L1PA4 LINE L1 0 6155 6055 276 313 74 37 chr10 13823549 13823712 -131765576 - MER5A DNA MER1_type -4 185 17 1702 146 14 14 chr10 13823755 13824043 -131765245 - AluSx SINE Alu -24 288 1 180 0 0 0 chr10 13824259 13824279 -131765009 + (A)n Simple_repeat Simple_repeat 1 20 0 25 0 0 0 chr10 13824942 13824967 -131764321 + AT_rich Low_complexity Low_complexity 1 25 0 21 57 0 0 chr10 13825185 13825220 -131764068 + AT_rich Low_complexity Low_complexity 1 35 0 1637 171 32 0 chr10 13826363 13826644 -131762644 - AluJo SINE Alu -22 290 1 2395 51 7 0 chr10 13827052 13827345 -131761943 - AluY SINE Alu -16 295 1 482 132 0 0 chr10 13827423 13827499 -131761789 + AluS SINE Alu 2 77 -236 235 263 0 0 chr10 13827647 13827704 -131761584 + L1MB8 LINE L1 5548 5604 -566 255 176 0 39 chr10 13828294 13828345 -131760943 + MER58 DNA MER1_type 2347 2395 -25 740 180 0 8 chr10 13830016 13830138 -131759150 + FLAM_C SINE Alu 1 121 -12 4511 51 2 11 chr10 13830855 13831419 -131757869 - L1PA6 LINE L1 0 6154 5596 2086 100 14 3 chr10 13831419 13831708 -131757580 - AluSx SINE Alu -20 292 1 3979 177 52 3 chr10 13831767 13832542 -131756746 + L1MB7 LINE L1 5341 6153 -31 2394 70 0 0 chr10 13832587 13832886 -131756402 + AluY SINE Alu 1 299 -12 610 243 31 35 chr10 13832903 13833161 -131756127 + L1MB8 LINE L1 5814 6170 -8 2221 94 3 0 chr10 13833161 13833458 -131755830 - AluSp SINE Alu -15 298 1 1988 139 3 0 chr10 13833463 13833765 -131755523 - AluSx SINE Alu -9 303 1 1391 183 3 50 chr10 13834141 13834284 -131755004 + AluJo SINE Alu 1 149 -163 2287 83 3 3 chr10 13834284 13834585 -131754703 + AluSq SINE Alu 1 301 -12 1391 183 3 50 chr10 13834585 13834758 -131754530 + AluJo SINE Alu 149 302 -10 2185 108 0 0 chr10 13835409 13835706 -131753582 + AluSg SINE Alu 1 297 -13 2164 109 0 3 chr10 13835723 13836025 -131753263 + AluSx SINE Alu 1 301 -11 1946 149 13 0 chr10 13836894 13837202 -131752086 + AluSx SINE Alu 1 312 0 1955 174 21 9 chr10 13839633 13839967 -131749321 + MER2 DNA MER2_type 1 338 -7 761 213 136 14 chr10 13840873 13841160 -131748128 + MER33 DNA MER1_type 3 324 0 1897 125 0 56 chr10 13841700 13842020 -131747268 + AluSx SINE Alu 1 302 -10 2306 37 40 10 chr10 13842023 13842319 -131746969 + AluY SINE Alu 1 305 -6 2046 109 0 16 chr10 13842324 13842628 -131746660 + AluSx SINE Alu 1 299 -13 275 250 0 40 chr10 13842636 13842736 -131746552 + (CATA)n Simple_repeat Simple_repeat 4 99 0 1817 163 3 0 chr10 13842765 13843060 -131746228 - AluSx SINE Alu -16 296 1 221 297 33 44 chr10 13843070 13843161 -131746127 - MIR SINE MIR -112 150 61 2119 107 3 3 chr10 13843557 13843857 -131745431 + AluSx SINE Alu 1 300 -12 796 143 0 0 chr10 13844564 13844683 -131744605 + L1PB4 LINE L1 6038 6156 0 2128 80 28 0 chr10 13845630 13845918 -131743370 + AluSx SINE Alu 5 300 -12 2003 167 0 3 chr10 13847662 13847973 -131741315 - AluJo SINE Alu -2 310 1 2370 116 0 0 chr10 13849027 13849338 -131739950 - AluSx SINE Alu -1 311 1 2185 125 0 10 chr10 13849342 13849653 -131739635 - AluSx SINE Alu -4 308 1 213 39 0 0 chr10 13849654 13849680 -131739608 + (TTTTC)n Simple_repeat Simple_repeat 4 29 0 1759 130 32 18 chr10 13849681 13849958 -131739330 - AluSx SINE Alu -31 281 1 2300 107 0 3 chr10 13850230 13850529 -131738759 + AluSx SINE Alu 1 298 -14 1959 175 9 55 chr10 13850530 13850964 -131738324 + L1MB7 LINE L1 5362 5775 -409 4423 41 13 4 chr10 13850972 13851512 -131737776 + L1PA5 LINE L1 5606 6150 -4 2034 178 18 3 chr10 13851563 13851946 -131737342 + L1MB7 LINE L1 5782 6170 -14 2160 81 40 0 chr10 13852023 13852318 -131736970 + AluSp SINE Alu 3 308 0 1494 181 11 4 chr10 13852897 13853157 -131736131 + AluJb SINE Alu 50 311 -1 1021 154 0 18 chr10 13853158 13853327 -131735961 - FRAM SINE Alu 0 166 1 850 157 0 15 chr10 13853457 13853591 -131735697 + AluJo SINE Alu 1 132 -170 2101 113 13 3 chr10 13853614 13853923 -131735365 - LTR9 LTR ERV1 -300 312 1 953 171 0 7 chr10 13854022 13854174 -131735114 + AluJo SINE Alu 138 288 -14 2080 124 0 0 chr10 13854176 13854487 -131734801 + AluSx SINE Alu 3 313 0 2537 52 13 3 chr10 13855759 13856067 -131733221 - AluSx SINE Alu 0 312 2 2307 93 10 7 chr10 13856696 13856998 -131732290 - AluSp SINE Alu -10 303 1 1810 149 0 4 chr10 13857411 13857679 -131731609 - AluJb SINE Alu 0 312 46 255 33 0 0 chr10 13857687 13857717 -131731571 + AluY SINE Alu 17 46 -256 2225 94 0 27 chr10 13857778 13858076 -131731212 + AluSq SINE Alu 4 293 -20 2233 124 3 3 chr10 13858734 13859041 -131730247 + AluSx SINE Alu 1 307 -5 1943 158 0 43 chr10 13859256 13859579 -131729709 + AluJo SINE Alu 2 310 -2 212 286 18 0 chr10 13860342 13860398 -131728890 - MIR3 SINE MIR -4 204 148 292 282 13 0 chr10 13860451 13860529 -131728759 + MIR SINE MIR 173 251 -11 396 59 0 0 chr10 13860560 13860611 -131728677 + (CAT)n Simple_repeat Simple_repeat 3 53 0 551 326 164 25 chr10 13860640 13861078 -131728210 - L3 LINE CR1 -288 1289 791 1162 222 32 63 chr10 13861123 13861501 -131727787 + LTR37A LTR ERV1 19 384 -42 226 272 12 0 chr10 13861551 13861632 -131727656 + L1MC4 LINE L1 6614 6695 -1347 1963 154 3 0 chr10 13861652 13861938 -131727350 - AluSx SINE Alu -25 287 1 249 306 71 53 chr10 13861996 13862166 -131727122 - L3 LINE CR1 -888 689 517 846 256 53 71 chr10 13862440 13862874 -131726414 + MER101 LTR ERV1 11 436 -38 1592 154 19 67 chr10 13862874 13863072 -131726216 - AluJo SINE Alu -9 303 124 1884 138 144 46 chr10 13863072 13863416 -131725872 + MSTA LTR MaLR 1 389 -39 2530 71 7 0 chr10 13863416 13863725 -131725563 - AluY SINE Alu 0 311 1 1884 138 144 46 chr10 13863725 13863770 -131725518 + MSTA LTR MaLR 389 428 0 1592 154 19 67 chr10 13863770 13863883 -131725405 - AluJo SINE Alu -188 124 7 333 247 146 56 chr10 13864433 13864490 -131724798 + L1MC/D LINE L1 5614 5664 -2144 1954 149 10 0 chr10 13864490 13864785 -131724503 + AluJb SINE Alu 1 298 -14 333 247 146 56 chr10 13864785 13864905 -131724383 + L1MC/D LINE L1 5664 5807 -2001 2231 98 10 3 chr10 13865260 13865556 -131723732 + AluSg SINE Alu 5 302 -8 1064 157 8 89 chr10 13865780 13865906 -131723382 + MLT1B LTR MaLR 1 101 -289 1920 128 10 0 chr10 13865906 13866203 -131723085 + L1PA13 LINE L1 5864 6163 0 1064 157 8 89 chr10 13866203 13866311 -131722977 + MLT1B LTR MaLR 101 216 -174 2071 156 3 0 chr10 13866784 13867086 -131722202 - AluSx SINE Alu -9 303 1 1777 134 76 10 chr10 13867094 13867384 -131721904 - AluJo SINE Alu -3 309 1 737 304 40 13 chr10 13867465 13867689 -131721599 + MIR SINE MIR 20 249 -13 236 40 0 263 chr10 13867699 13867736 -131721552 - L1MB4 LINE L1 0 6180 6171 2274 101 3 0 chr10 13867736 13868023 -131721265 + AluSp SINE Alu 9 296 -17 236 40 0 263 chr10 13868023 13868061 -131721227 - L1MB4 LINE L1 -9 6171 6125 25 31 0 0 chr10 13868061 13868093 -131721195 + AT_rich Low_complexity Low_complexity 1 32 0 1945 139 7 17 chr10 13868093 13868387 -131720901 - AluSx SINE Alu -21 291 1 3349 149 31 0 chr10 13868387 13868969 -131720319 - L1MB3 LINE L1 -42 6141 5542 420 276 196 14 chr10 13868969 13869183 -131720105 + L2 LINE L2 2201 2453 -861 323 226 95 0 chr10 13869215 13869299 -131719989 - MER45C DNA AcHobo -320 633 542 466 259 28 0 chr10 13869367 13869475 -131719813 - L2 LINE L2 -17 3296 3186 243 286 29 0 chr10 13869495 13869565 -131719723 - L2 LINE L2 -21 3292 3221 1962 158 14 3 chr10 13869695 13869992 -131719296 - AluSx SINE Alu -12 300 1 2313 55 0 41 chr10 13870000 13870325 -131718963 - AluY SINE Alu 0 313 1 2051 164 21 38 chr10 13870326 13870519 -131718769 - L1MC2 LINE L1 -14 7757 7562 2061 162 0 0 chr10 13870519 13870828 -131718460 - AluSx SINE Alu -3 309 1 2051 164 21 38 chr10 13870828 13871106 -131718182 - L1MC2 LINE L1 -209 7562 6142 1679 172 0 11 chr10 13871107 13871392 -131717896 + AluJo SINE Alu 9 290 -22 457 186 0 0 chr10 13871461 13871559 -131717729 - L1ME1 LINE L1 -1 6177 6076 196 382 99 0 chr10 13871559 13871690 -131717598 - L2 LINE L2 -233 3039 2896 782 211 98 79 chr10 13872274 13872341 -131716947 - MLT1J2 LTR MaLR -3 447 383 3053 150 20 76 chr10 13872341 13872989 -131716299 - LTR9 LTR ERV1 0 612 1 782 211 98 79 chr10 13872989 13873126 -131716162 - MLT1J2 LTR MaLR -67 383 250 1747 177 21 10 chr10 13873126 13873414 -131715874 + AluJo SINE Alu 1 291 -21 782 211 98 79 chr10 13873414 13873565 -131715723 - MLT1J2 LTR MaLR -200 250 79 2481 82 0 13 chr10 13873565 13873880 -131715408 + AluY SINE Alu 1 311 0 782 211 98 79 chr10 13873880 13873940 -131715348 - MLT1J2 LTR MaLR -371 79 22 320 322 16 26 chr10 13874356 13874502 -131714786 + MIR SINE MIR 34 180 -68 2343 107 0 0 chr10 13874612 13874911 -131714377 + AluSx SINE Alu 1 299 -13 2257 122 3 6 chr10 13875198 13875510 -131713778 - AluSx SINE Alu -1 311 1 2134 130 0 3 chr10 13875744 13876043 -131713245 + AluSx SINE Alu 2 299 -13 425 239 38 31 chr10 13876156 13876315 -131712973 - LTR33A LTR ERVL -2 521 362 1070 177 62 49 chr10 13876392 13876618 -131712670 + AluJo SINE Alu 5 233 -79 2056 149 7 71 chr10 13876618 13877175 -131712113 + LTR9 LTR ERV1 1 612 0 456 176 0 0 chr10 13877175 13877249 -131712039 + AluJo SINE Alu 230 303 -9 2482 65 3 0 chr10 13877315 13877608 -131711680 - AluY SINE Alu -17 294 1 1922 138 10 27 chr10 13878606 13878902 -131710386 - AluJo SINE Alu -11 301 11 230 287 130 35 chr10 13878974 13879089 -131710199 - MIR SINE MIR -122 140 15 966 230 96 9 chr10 13879461 13879691 -131709597 - MIR SINE MIR 0 262 13 247 239 45 0 chr10 13879699 13879766 -131709522 + MIR SINE MIR 91 160 -102 2183 100 10 23 chr10 13879770 13880071 -131709217 + AluSp SINE Alu 2 298 -15 1186 121 0 18 chr10 13880071 13880236 -131709052 + AluSg/x SINE Alu 134 295 -17 219 69 0 0 chr10 13880237 13880266 -131709022 + (TA)n Simple_repeat Simple_repeat 1 29 0 207 296 42 0 chr10 13880267 13880338 -131708950 + MIR SINE MIR 189 262 0 419 262 143 43 chr10 13880435 13880645 -131708643 + MIR SINE MIR 32 262 0 3750 80 9 23 chr10 13880683 13881090 -131708198 + MER41A LTR ERV1 35 437 -117 1840 98 10 101 chr10 13881090 13881424 -131707864 - AluSx SINE Alu 0 309 4 3750 80 9 23 chr10 13881424 13881541 -131707747 + MER41A LTR ERV1 437 554 0 186 71 0 0 chr10 13882766 13882794 -131706494 + (TTG)n Simple_repeat Simple_repeat 2 29 0 2078 126 0 3 chr10 13882796 13883081 -131706207 - AluSx SINE Alu -18 294 11 356 226 21 11 chr10 13883219 13883312 -131705976 + MER45 DNA AcHobo 35 128 -912 1745 163 21 17 chr10 13883460 13883749 -131705539 - AluJb SINE Alu -22 290 1 2591 166 23 2 chr10 13883749 13884224 -131705064 - L1MB4 LINE L1 -40 6140 5656 2459 89 0 6 chr10 13884224 13884537 -131704751 - AluSp SINE Alu -2 311 1 854 239 164 43 chr10 13884780 13884816 -131704472 + MER110A LTR ERV1 50 80 -411 2702 135 36 7 chr10 13884816 13885230 -131704058 - MSTA LTR MaLR -2 426 1 854 239 164 43 chr10 13885230 13885607 -131703681 + MER110A LTR ERV1 80 491 0 363 297 54 9 chr10 13885702 13885813 -131703475 - L2 LINE L2 0 3272 3157 933 210 86 124 chr10 13885855 13886276 -131703012 + MER34B LTR ERV1 5 400 -165 2066 135 3 31 chr10 13886276 13886594 -131702694 - AluSx SINE Alu -3 309 1 933 210 86 124 chr10 13886594 13886753 -131702535 + MER34B LTR ERV1 400 563 -2 1109 66 0 0 chr10 13888139 13888305 -131700983 - AluSc SINE Alu 0 310 145 373 253 65 146 chr10 13888425 13888871 -131700417 - L2 LINE L2 -801 2513 2104 1607 200 14 11 chr10 13889269 13889572 -131699716 + AluJo SINE Alu 2 305 0 1182 221 83 88 chr10 13889624 13889808 -131699480 + MLT1C LTR MaLR 5 188 -279 2314 114 13 0 chr10 13889808 13890115 -131699173 + AluSx SINE Alu 1 311 -1 1182 221 83 88 chr10 13890115 13890387 -131698901 + MLT1C LTR MaLR 188 459 -8 184 319 111 14 chr10 13890416 13890488 -131698800 + MER5A DNA MER1_type 111 189 0 193 364 0 0 chr10 13890784 13890850 -131698438 + L2 LINE L2 750 815 -2499 758 149 0 0 chr10 13890861 13890975 -131698313 - FLAM_A SINE Alu -5 137 24 345 348 106 0 chr10 13891576 13891737 -131697551 - MIR SINE MIR 0 262 85 523 255 48 39 chr10 13891737 13891945 -131697343 - LTR16C LTR ERVL 0 491 282 301 219 7 22 chr10 13891958 13892048 -131697240 + MLT1D LTR MaLR 4 92 -413 862 209 25 0 chr10 13892077 13892240 -131697048 + FRAM SINE Alu 1 166 -10 1162 270 61 3 chr10 13892254 13892573 -131696715 + MLT1D LTR MaLR 113 457 -48 3910 82 3 91 chr10 13892573 13892648 -131696640 - MER41A LTR ERV1 0 554 474 2320 113 0 0 chr10 13892648 13892950 -131696338 + AluSx SINE Alu 1 302 -10 3910 82 3 91 chr10 13892950 13893481 -131695807 - MER41A LTR ERV1 -80 474 1 1162 270 61 3 chr10 13893481 13893524 -131695764 + MLT1D LTR MaLR 457 496 -9 182 349 79 0 chr10 13893819 13893882 -131695406 - MIR SINE MIR -179 83 16 2164 116 0 7 chr10 13893923 13894215 -131695073 + AluSx SINE Alu 1 290 -22 951 171 7 0 chr10 13894215 13894367 -131694921 + AluSq SINE Alu 134 286 -27 2285 91 3 23 chr10 13894415 13894723 -131694565 - AluSg1 SINE Alu -7 302 1 606 101 0 0 chr10 13894723 13894802 -131694486 - AluSq/x SINE Alu -167 145 67 1323 131 0 30 chr10 13894802 13895001 -131694287 - AluSg SINE Alu -113 197 5 712 177 23 0 chr10 13895017 13895147 -131694141 - FLAM_C SINE Alu 0 133 1 340 219 12 0 chr10 13895147 13895229 -131694059 + MER33 DNA MER1_type 281 363 0 497 224 8 0 chr10 13895994 13896119 -131693169 + CT-rich Low_complexity Low_complexity 1 126 0 2333 86 7 0 chr10 13896119 13896409 -131692879 - AluSx SINE Alu -20 292 1 725 232 6 18 chr10 13896412 13896576 -131692712 - FRAM SINE Alu -15 161 1 881 197 27 22 chr10 13896829 13897012 -131692276 + MLT1D LTR MaLR 3 186 -319 517 188 0 176 chr10 13897017 13897099 -131692189 + MLT1D LTR MaLR 325 420 -206 2239 109 0 35 chr10 13897099 13897411 -131691877 - AluSx SINE Alu -11 301 1 2223 97 0 16 chr10 13897413 13897435 -131691853 - AluSq SINE Alu -9 304 283 262 0 0 0 chr10 13897435 13897464 -131691824 + (TTTA)n Simple_repeat Simple_repeat 2 180 0 2223 97 0 16 chr10 13897464 13897750 -131691538 - AluSq SINE Alu -30 283 1 517 188 0 176 chr10 13897750 13897876 -131691412 + MLT1D LTR MaLR 421 624 -2 199 333 143 0 chr10 13897980 13898064 -131691224 + L2 LINE L2 3146 3241 -31 * 254 292 36 36 chr10 13898050 13898187 -131691101 - L2 LINE L2 -1256 2058 1922 2395 74 0 0 chr10 13898188 13898499 -131690789 + AluY SINE Alu 1 311 0 2052 108 0 16 chr10 13898951 13899258 -131690030 - AluSc SINE Alu -5 304 3 831 176 57 13 chr10 13899358 13899517 -131689771 + FRAM SINE Alu 1 166 0 2260 95 0 13 chr10 13899647 13899952 -131689336 - AluSp SINE Alu -12 301 1 208 261 15 31 chr10 13900014 13900079 -131689209 - L2 LINE L2 -11 3261 3198 2439 54 0 0 chr10 13900152 13900448 -131688840 - AluY SINE Alu -13 298 3 1766 164 6 3 chr10 13900798 13900933 -131688355 + AluJb SINE Alu 1 134 -178 2132 112 7 3 chr10 13900933 13901238 -131688050 + AluSq SINE Alu 1 306 -7 1766 164 6 3 chr10 13901238 13901413 -131687875 + AluJb SINE Alu 134 312 0 2326 60 0 0 chr10 13901644 13901944 -131687344 + AluY SINE Alu 1 300 -11 2184 108 0 0 chr10 13902303 13902608 -131686680 + AluSx SINE Alu 1 305 -7 1631 162 3 27 chr10 13902825 13902998 -131686290 - AluJo SINE Alu -22 290 125 2410 48 3 0 chr10 13902998 13903292 -131685996 + AluY SINE Alu 1 295 -16 1631 162 3 27 chr10 13903292 13903415 -131685873 - AluJo SINE Alu -187 125 1 1999 125 0 0 chr10 13903476 13903771 -131685517 - AluSx SINE Alu -2 310 16 2003 124 3 0 chr10 13904388 13904687 -131684601 + AluSx SINE Alu 1 300 -12 193 264 56 14 chr10 13904911 13904983 -131684305 + L3 LINE CR1 1499 1573 -4 187 333 50 50 chr10 13905050 13905230 -131684058 + L2 LINE L2 2511 2690 -624 2137 123 0 0 chr10 13905291 13905593 -131683695 - AluSx SINE Alu -10 302 1 1597 118 0 4 chr10 13905593 13905822 -131683466 - AluSg/x SINE Alu -9 303 76 2292 98 0 0 chr10 13906069 13906376 -131682912 + AluSx SINE Alu 1 307 -5 1013 197 17 38 chr10 13906474 13906713 -131682575 - AluJo SINE Alu -24 288 55 23 0 0 0 chr10 13906717 13906740 -131682548 + AT_rich Low_complexity Low_complexity 1 23 0 1815 137 44 3 chr10 13906929 13907222 -131682066 - AluSx SINE Alu -7 305 1 760 254 97 89 chr10 13907226 13907349 -131681939 + L1ME3 LINE L1 5083 5203 -959 1503 207 3 10 chr10 13907349 13907649 -131681639 + AluJb SINE Alu 1 298 -14 760 254 97 89 chr10 13907649 13907825 -131681463 + L1ME3 LINE L1 5203 5376 -786 1954 131 3 0 chr10 13907825 13908123 -131681165 + AluSp SINE Alu 1 299 -14 760 254 97 89 chr10 13908123 13908467 -131680821 + L1ME3 LINE L1 5376 5716 -446 2268 90 3 0 chr10 13908467 13908777 -131680511 + AluSp SINE Alu 1 311 -2 760 254 97 89 chr10 13908777 13908909 -131680379 + L1ME3 LINE L1 5716 5868 -294 948 135 0 56 chr10 13908909 13909040 -131680248 + L1MB3 LINE L1 6014 6134 -49 2186 95 3 0 chr10 13909040 13909334 -131679954 - AluSp SINE Alu -18 295 1 948 135 0 56 chr10 13909334 13909380 -131679908 + L1MB3 LINE L1 6134 6181 -2 760 254 97 89 chr10 13909380 13909454 -131679834 + L1ME3 LINE L1 5868 5940 -222 1890 126 7 0 chr10 13909600 13909912 -131679376 - AluSx SINE Alu 0 315 2 721 153 46 30 chr10 13909944 13910075 -131679213 + FLAM_C SINE Alu 1 133 0 1461 209 7 3 chr10 13910089 13910395 -131678893 + AluJo SINE Alu 1 307 -5 29 28 0 0 chr10 13911134 13911170 -131678118 + AT_rich Low_complexity Low_complexity 1 36 0 2605 144 19 16 chr10 13911190 13911621 -131677667 - L1PA16 LINE L1 -8 6158 5727 264 128 21 0 chr10 13911622 13911669 -131677619 + Charlie5 DNA MER1_type 2533 2580 -32 1972 107 0 55 chr10 13911933 13912242 -131677046 - AluSg SINE Alu -18 292 1 180 238 143 60 chr10 13912416 13912500 -131676788 - MIR3 SINE MIR -4 204 114 299 282 215 34 chr10 13912517 13912666 -131676622 - MIR SINE MIR -10 252 77 1425 177 9 47 chr10 13912881 13913203 -131676085 + AluJo SINE Alu 2 311 -1 2063 128 0 0 chr10 13913209 13913506 -131675782 + AluSx SINE Alu 1 297 -15 877 207 149 0 chr10 13913548 13913790 -131675498 - MER33 DNA MER1_type -46 278 1 2345 68 0 3 chr10 13913982 13914275 -131675013 + AluSc SINE Alu 2 293 -16 313 51 0 0 chr10 13914875 13914914 -131674374 + U6 snRNA snRNA 1 39 -68 1109 238 81 36 chr10 13915003 13915360 -131673928 + MLT1A2 LTR MaLR 2 374 0 1163 236 78 0 chr10 13915360 13915602 -131673686 + Tigger7 DNA MER2_type 3 263 -2224 529 196 11 0 chr10 13915647 13915739 -131673549 + Tigger7 DNA MER2_type 2394 2486 -1 634 192 56 8 chr10 13915789 13915914 -131673374 - FLAM_C SINE Alu -11 132 2 25 31 0 0 chr10 13915927 13915959 -131673329 + AT_rich Low_complexity Low_complexity 1 32 0 2121 109 3 13 chr10 13916496 13916807 -131672481 + AluSx SINE Alu 1 308 -4 1748 191 41 26 chr10 13918211 13918556 -131670732 + MLT1A1 LTR MaLR 4 353 -12 3252 134 39 19 chr10 13919132 13919484 -131669804 + MER1A DNA MER1_type 1 368 -2332 2199 105 3 0 chr10 13919484 13919789 -131669499 - AluSp SINE Alu -7 306 1 3252 134 39 19 chr10 13919789 13919952 -131669336 + MER1A DNA MER1_type 368 526 -1 2135 114 0 0 chr10 13920213 13920510 -131668778 + AluSx SINE Alu 3 299 -13 630 241 81 17 chr10 13920642 13920816 -131668472 - MIR SINE MIR 0 262 78 580 143 0 0 chr10 13920828 13920919 -131668369 + AluJb SINE Alu 208 298 -14 214 62 31 0 chr10 13921146 13921178 -131668110 - MER5C DNA MER1_type 0 324 292 2266 78 0 3 chr10 13921182 13921477 -131667811 - AluSg1 SINE Alu -15 294 1 449 267 43 25 chr10 13921521 13921682 -131667606 - MER5C DNA MER1_type -110 214 51 868 132 0 0 chr10 13921712 13921841 -131667447 - FLAM_C SINE Alu 0 133 5 386 320 13 7 chr10 13922055 13922208 -131667080 + MIR SINE MIR 71 224 -38 1491 134 21 124 chr10 13922735 13923115 -131666173 - MLT1B LTR MaLR -49 341 1 1975 148 0 0 chr10 13923284 13923588 -131665700 - AluSx SINE Alu -8 304 1 203 285 160 42 chr10 13924655 13924799 -131664489 + MIR SINE MIR 96 256 -6 824 172 154 0 chr10 13925167 13925336 -131663952 - AluSg/x SINE Alu -23 287 93 1064 195 28 48 chr10 13925481 13925518 -131663770 + MLT1A2 LTR MaLR 129 165 -209 1458 197 7 13 chr10 13925518 13925823 -131663465 + AluSx SINE Alu 1 303 -9 1064 195 28 48 chr10 13925823 13926036 -131663252 + MLT1A2 LTR MaLR 165 374 0 346 253 258 20 chr10 13926342 13926540 -131662748 - MIR SINE MIR -12 250 6 6050 155 18 6 chr10 13926673 13928680 -131660608 + L1PB3 LINE L1 4125 6153 -1 1180 121 6 0 chr10 13928677 13928851 -131660437 + L1MA7 LINE L1 5413 5587 -725 * 1006 109 195 226 chr10 13928851 13929338 -131659950 + LTR12 LTR ERV1 9 480 -234 3749 143 42 42 chr10 13929340 13929668 -131659620 + L1MA7 LINE L1 5576 5903 -388 2283 95 3 0 chr10 13929668 13929974 -131659314 - AluSx SINE Alu -5 307 1 3749 143 42 42 chr10 13929974 13930361 -131658927 + L1MA7 LINE L1 5902 6291 0 4369 161 19 18 chr10 13930380 13930596 -131658692 + L1MB7 LINE L1 5384 5598 -586 1700 148 49 0 chr10 13930596 13930880 -131658408 + AluJo SINE Alu 1 298 -14 4369 161 19 18 chr10 13930880 13931448 -131657840 + L1MB7 LINE L1 5598 6169 -15 296 230 133 9 chr10 13931461 13931574 -131657714 - L1ME4a LINE L1 -51 6070 5944 690 243 39 6 chr10 13932446 13932627 -131656661 - MER5A DNA MER1_type -2 187 1 1916 108 0 0 chr10 13932861 13933121 -131656167 + AluSx SINE Alu 39 298 -14 2216 92 0 0 chr10 13933217 13933511 -131655777 - AluSc SINE Alu -15 294 1 990 271 36 12 chr10 13933682 13933933 -131655355 + MIR SINE MIR 6 262 0 342 317 127 28 chr10 13934066 13934208 -131655080 + MIR SINE MIR 17 172 -90 1083 78 14 0 chr10 13934210 13934351 -131654937 + MLT2A2 LTR ERVL 1 143 -310 223 206 27 41 chr10 13934487 13934560 -131654728 + CT-rich Low_complexity Low_complexity 4 75 0 1422 196 26 26 chr10 13936164 13936475 -131652813 - AluJo SINE Alu 0 312 2 825 138 8 8 chr10 13936495 13936625 -131652663 - FLAM_C SINE Alu -12 131 2 335 296 98 15 chr10 13937088 13937220 -131652068 - L1ME4a LINE L1 -233 5888 5746 292 327 109 19 chr10 13938644 13938800 -131650488 - MIR3 SINE MIR -9 199 30 25 65 0 0 chr10 13939622 13939668 -131649620 + AT_rich Low_complexity Low_complexity 1 46 0 276 30 0 0 chr10 13941352 13941385 -131647903 + (TTCA)n Simple_repeat Simple_repeat 2 34 0 181 286 98 53 chr10 13941655 13941788 -131647500 + L2 LINE L2 3079 3217 -96 2113 85 37 0 chr10 13942435 13942730 -131646558 + AluSg SINE Alu 1 306 -4 2009 117 0 13 chr10 13943748 13944055 -131645233 + AluSg SINE Alu 1 303 -7 1196 235 52 42 chr10 13944182 13944651 -131644637 - THE1C LTR MaLR 0 375 1 1514 164 35 35 chr10 13944700 13944813 -131644475 + AluJo SINE Alu 1 113 -199 2310 96 0 0 chr10 13944813 13945115 -131644173 - AluSx SINE Alu -10 302 1 1514 164 35 35 chr10 13945115 13945312 -131643976 + AluJo SINE Alu 112 311 -1 2391 87 0 0 chr10 13945606 13945916 -131643372 - AluSg SINE Alu 0 310 1 288 189 268 8 chr10 13945955 13946082 -131643206 + L1ME4a LINE L1 5962 6121 0 2115 78 28 0 chr10 13946732 13947014 -131642274 - AluSp SINE Alu -23 290 1 349 59 78 0 chr10 13947075 13947126 -131642162 - MLT2A2 LTR ERVL 0 453 399 347 277 0 43 chr10 13947128 13947222 -131642066 + L1MC4 LINE L1 6614 6703 -1339 325 359 0 0 chr10 13947144 13947236 -131642052 - L1MC4 LINE L1 -1337 6705 6614 * 607 85 0 0 chr10 13947248 13947330 -131641958 - MLT2A1 LTR ERVL -40 404 323 2575 46 0 13 chr10 13948318 13948623 -131640665 - AluY SINE Alu -10 301 1 508 197 49 115 chr10 13948965 13949148 -131640140 + MIR3 SINE MIR 27 197 -11 229 310 23 0 chr10 13949509 13949596 -131639692 - MIR3 SINE MIR -11 197 109 2248 24 0 0 chr10 13951042 13951289 -131637999 - AluY SINE Alu -5 306 60 2232 46 8 0 chr10 13952235 13952496 -131636792 + AluY SINE Alu 38 300 -11 440 285 140 6 chr10 13952828 13953007 -131636281 - MIR SINE MIR 0 262 60 489 101 0 119 chr10 13953436 13953451 -131635837 - FLAM_A SINE Alu -181 130 115 219 36 0 0 chr10 13953451 13953479 -131635809 + (TG)n Simple_repeat Simple_repeat 2 29 0 489 101 0 119 chr10 13953479 13953572 -131635716 - FLAM_A SINE Alu -196 115 35 396 86 17 0 chr10 13953572 13953630 -131635658 - L1M2 LINE L1 -695 5605 5547 2157 20 12 0 chr10 13953681 13953932 -131635356 - L1PA4 LINE L1 -1 6154 5901 377 320 47 0 chr10 13955854 13956004 -131633284 + L1ME LINE L1 5513 5669 -452 382 158 0 0 chr10 13956335 13956392 -131632896 + MER2 DNA MER2_type 29 85 -260 1467 174 66 4 chr10 13956392 13956507 -131632781 + AluJo SINE Alu 1 107 -205 225 65 0 0 chr10 13956507 13956538 -131632750 + (CAAT)n Simple_repeat Simple_repeat 4 34 0 1467 174 66 4 chr10 13956538 13956680 -131632608 + AluJo SINE Alu 107 274 -38 418 214 0 0 chr10 13956782 13956852 -131632436 + MER2 DNA MER2_type 268 337 -8 2193 103 0 0 chr10 13956958 13957276 -131632012 + AluSx SINE Alu 1 318 0 249 316 31 10 chr10 13959070 13959168 -131630120 - MIR3 SINE MIR -1 207 108 207 244 0 0 chr10 13959861 13959906 -131629382 + L2 LINE L2 3227 3271 -1 290 233 14 0 chr10 13960503 13960576 -131628712 + L2 LINE L2 3240 3313 0 614 306 32 19 chr10 13961614 13961830 -131627458 - MIR SINE MIR -4 258 40 2397 100 6 0 chr10 13961872 13962183 -131627105 - AluSp SINE Alu 0 313 1 2055 118 40 7 chr10 13962308 13962604 -131626684 + AluSx SINE Alu 1 306 -6 28 29 0 0 chr10 13962738 13962773 -131626515 + AT_rich Low_complexity Low_complexity 1 35 0 2332 93 0 3 chr10 13962982 13963284 -131626004 - AluSc SINE Alu -8 301 1 21 0 0 0 chr10 13963478 13963499 -131625789 + AT_rich Low_complexity Low_complexity 1 21 0 666 267 91 22 chr10 13963535 13963767 -131625521 - MIR SINE MIR 0 262 15 219 69 0 0 chr10 13964046 13964075 -131625213 + (TTA)n Simple_repeat Simple_repeat 1 29 0 309 258 0 22 chr10 13964403 13964492 -131624796 - MIR SINE MIR -3 259 173 2244 129 0 0 chr10 13965291 13965601 -131623687 - AluSx SINE Alu -2 310 1 1234 123 0 0 chr10 13965660 13965830 -131623458 + AluSg/x SINE Alu 133 302 -10 557 232 27 92 chr10 13968572 13968634 -131620654 + MER5B DNA MER1_type 1 65 -113 2519 78 0 0 chr10 13968634 13968943 -131620345 + AluSc SINE Alu 1 309 0 557 232 27 92 chr10 13968943 13969065 -131620223 + MER5B DNA MER1_type 65 173 -5 2502 65 0 0 chr10 13969877 13970169 -131619119 + AluSp SINE Alu 1 292 -21 2113 145 0 3 chr10 13970780 13971091 -131618197 - AluSx SINE Alu -2 310 1 2333 96 10 6 chr10 13973807 13974119 -131615169 + AluSp SINE Alu 1 313 0 1900 155 3 0 chr10 13974283 13974574 -131614714 + AluJb SINE Alu 5 296 -16 195 139 0 0 chr10 13974755 13974791 -131614497 + (TA)n Simple_repeat Simple_repeat 2 37 0 2102 112 4 0 chr10 13976150 13976453 -131612835 + AluSx SINE Alu 6 309 0 2005 219 80 14 chr10 13977788 13978286 -131611002 - MER54A LTR ERVL 0 901 371 183 288 137 52 chr10 13979558 13979711 -131609577 - L2 LINE L2 -801 2513 2348 323 133 217 0 chr10 13980520 13980580 -131608708 + L1MB4 LINE L1 6031 6103 -77 499 312 163 14 chr10 13982878 13983416 -131605872 + L1MC4a LINE L1 5259 5800 -321 2230 106 0 7 chr10 13983677 13983969 -131605319 + AluSx SINE Alu 1 290 -22 629 118 49 0 chr10 13983992 13984094 -131605194 - HY1 scRNA scRNA -4 108 2 197 234 124 73 chr10 13984487 13984624 -131604664 - MIR SINE MIR -12 250 107 936 159 0 0 chr10 13984927 13985065 -131604223 + FAM SINE Alu 35 172 -13 182 135 54 0 chr10 13985345 13985382 -131603906 + L2 LINE L2 1751 1789 -1525 750 219 14 117 chr10 13985730 13986013 -131603275 + MER112 DNA MER1_type 1 254 -6 529 296 207 10 chr10 13986126 13986522 -131602766 + L2 LINE L2 2246 2719 -595 304 263 11 21 chr10 13986648 13986743 -131602545 + MER5B DNA MER1_type 4 97 -81 267 269 106 0 chr10 13988867 13988971 -131600317 - L2 LINE L2 0 3313 3199 2091 129 3 0 chr10 13989225 13989520 -131599768 + AluSx SINE Alu 1 296 -16 188 235 0 20 chr10 13989520 13989571 -131599717 - L2 LINE L2 -6 3307 3258 1045 156 39 6 chr10 13989847 13990027 -131599261 - AluJb SINE Alu -12 300 115 1678 144 34 0 chr10 13990268 13990532 -131598756 + AluJo SINE Alu 17 289 -23 295 324 60 0 chr10 13990974 13991156 -131598132 - MER91A DNA MER1_type -1 195 3 180 331 47 74 chr10 13991671 13991819 -131597469 - L2 LINE L2 -26 3246 3103 2653 45 0 13 chr10 13991972 13992286 -131597002 + AluY SINE Alu 1 310 -1 208 270 210 10 chr10 13992427 13992527 -131596761 - MIR SINE MIR -73 135 16 231 266 181 20 chr10 13992844 13993043 -131596245 + MIR SINE MIR 2 232 -30 256 242 72 53 chr10 13993406 13993569 -131595719 + MIR SINE MIR 30 192 -62 327 285 228 5 chr10 13994020 13994213 -131595075 + MIR SINE MIR 14 249 -13 192 167 33 67 chr10 13994869 13994929 -131594359 + L2 LINE L2 3256 3313 0 428 295 78 16 chr10 13995567 13995760 -131593528 + MIR SINE MIR 40 244 -18 2460 91 0 3 chr10 13997143 13997450 -131591838 + AluSq SINE Alu 3 308 -5 2611 233 69 46 chr10 13998322 13998869 -131590419 - L1ME3 LINE L1 -9 6153 5577 2233 122 0 3 chr10 13998869 13999172 -131590116 - AluSx SINE Alu -10 302 1 2611 233 69 46 chr10 13999172 13999474 -131589814 - L1ME3 LINE L1 -585 5577 5284 2283 95 0 3 chr10 13999474 13999769 -131589519 + AluSq SINE Alu 1 294 -19 225 148 93 0 chr10 13999772 13999826 -131589462 + HSMAR1 DNA Mariner 1 59 -1228 1263 202 53 116 chr10 14000003 14000514 -131588774 - MLT1D LTR MaLR 0 505 27 307 298 43 0 chr10 14000945 14001039 -131588249 + MIR SINE MIR 1 98 -164 332 229 30 69 chr10 14001081 14001212 -131588076 - LTR41 LTR ERVL -49 724 599 294 239 87 0 chr10 14001623 14001715 -131587573 + MIR SINE MIR 114 213 -49 2222 118 3 10 chr10 14001875 14002189 -131587099 + AluSx SINE Alu 1 312 0 634 244 54 32 chr10 14002381 14002602 -131586686 - L2 LINE L2 0 3313 3088 3242 78 93 82 chr10 14002619 14002929 -131586359 + MER41A LTR ERV1 1 321 -233 2636 54 0 13 chr10 14002929 14003243 -131586045 + AluY SINE Alu 1 310 -1 3242 78 93 82 chr10 14003243 14003480 -131585808 + MER41A LTR ERV1 321 554 0 225 108 0 0 chr10 14003501 14003538 -131585750 + (TGG)n Simple_repeat Simple_repeat 2 38 0 358 73 18 0 chr10 14003826 14003881 -131585407 - AluSp/q SINE Alu -74 229 174 2235 82 3 10 chr10 14004536 14004827 -131584461 - AluSx SINE Alu -2 310 22 2042 153 0 0 chr10 14005205 14005505 -131583783 - AluSx SINE Alu -12 300 1 298 333 58 0 chr10 14007957 14008095 -131581193 - MIR SINE MIR -44 218 73 644 154 0 10 chr10 14009486 14009590 -131579698 - FLAM_A SINE Alu -12 130 28 269 306 79 91 chr10 14009910 14010263 -131579025 - L2 LINE L2 0 3272 2924 761 289 159 53 chr10 14010289 14010504 -131578784 + L1MEd LINE L1 213 404 -5715 2282 108 0 0 chr10 14010504 14010799 -131578489 + AluSx SINE Alu 1 295 -17 761 289 159 53 chr10 14010799 14011230 -131578058 + L1MEd LINE L1 404 788 -5331 2541 104 28 3 chr10 14011230 14011585 -131577703 - THE1B LTR MaLR 0 364 1 761 289 159 53 chr10 14011585 14011865 -131577423 + L1MEd LINE L1 788 1239 -4880 776 102 94 8 chr10 14012176 14012303 -131576985 + MER85 DNA T2_type 2 139 0 312 215 74 60 chr10 14012557 14012761 -131576527 + L1 LINE L1 4904 5110 -1036 426 340 100 8 chr10 14012886 14013265 -131576023 + L1ME LINE L1 5272 5685 -485 226 259 0 0 chr10 14014001 14014059 -131575229 + L2 LINE L2 3000 3057 -215 2081 127 10 0 chr10 14015335 14015627 -131573661 + AluSx SINE Alu 1 295 -17 198 103 0 0 chr10 14016905 14016934 -131572354 + (TTCC)n Simple_repeat Simple_repeat 4 32 0 200 345 26 17 chr10 14016935 14017051 -131572237 - L2 LINE L2 -18 3295 3179 364 295 16 23 chr10 14017072 14017201 -131572087 - MER94 DNA DNA -5 129 2 2238 102 0 0 chr10 14018546 14018830 -131570458 - AluSc SINE Alu -25 284 1 590 260 73 0 chr10 14019257 14019434 -131569854 - MER91B DNA MER1_type 0 190 1 182 315 0 0 chr10 14020077 14020131 -131569157 + L2 LINE L2 2998 3051 -262 408 240 110 20 chr10 14023151 14023297 -131565991 + MER5A DNA MER1_type 31 189 0 337 294 32 16 chr10 14024037 14024163 -131565125 + MIR SINE MIR 29 156 -106 21 0 0 0 chr10 14025150 14025171 -131564117 + AT_rich Low_complexity Low_complexity 1 21 0 635 223 126 49 chr10 14026131 14026559 -131562729 - LTR48 LTR ERV1 0 787 128 423 287 0 26 chr10 14026532 14026647 -131562641 - MER34 LTR ERV1 -430 112 1 * 23 0 0 0 chr10 14026892 14026915 -131562373 + AT_rich Low_complexity Low_complexity 1 23 0 2149 119 0 7 chr10 14027236 14027538 -131561750 - AluSx SINE Alu -12 300 1 1086 288 113 19 chr10 14077763 14078401 -131510887 - L1MEc LINE L1 -4722 1674 977 374 216 0 9 chr10 14078477 14078593 -131510695 + CT-rich Low_complexity Low_complexity 4 118 0 648 286 9 74 chr10 14078596 14078921 -131510367 - L1MEc LINE L1 -6015 381 78 2137 128 7 0 chr10 14079215 14079512 -131509776 + AluSx SINE Alu 1 299 -13 383 312 105 55 chr10 14079707 14080268 -131509020 - L1 LINE L1 -1756 4390 3858 213 94 0 0 chr10 14080268 14080300 -131508988 + (TG)n Simple_repeat Simple_repeat 2 33 0 2011 130 0 0 chr10 14080300 14080584 -131508704 - AluY SINE Alu -27 284 1 383 312 105 55 chr10 14080584 14080789 -131508499 - L1 LINE L1 -2287 3859 3585 6014 177 59 65 chr10 14080812 14081356 -131507932 + Charlie1a DNA MER1_type 49 595 -2166 4958 65 22 0 chr10 14081356 14081955 -131507333 - L1PA7 LINE L1 0 6154 5543 6014 177 59 65 chr10 14081955 14082125 -131507163 + Charlie1a DNA MER1_type 595 764 -1997 2078 114 38 0 chr10 14082125 14082415 -131506873 + AluSx SINE Alu 1 301 -11 6014 177 59 65 chr10 14082415 14083108 -131506180 + Charlie1a DNA MER1_type 764 1449 -6 304 294 78 39 chr10 14083132 14083398 -131505890 - L1 LINE L1 -2573 3573 3292 2344 109 3 0 chr10 14083398 14083709 -131505579 - AluSx SINE Alu 0 312 1 304 294 78 39 chr10 14083709 14083751 -131505537 - L1 LINE L1 -2854 3292 3253 2297 113 0 0 chr10 14084043 14084345 -131504943 - AluSq SINE Alu -9 304 3 764 258 56 30 chr10 14084548 14084815 -131504473 - LTR16A LTR ERVL -58 392 119 341 234 32 32 chr10 14084970 14085064 -131504224 - HsTC2 DNA Tc2 -1804 94 1 1409 189 47 17 chr10 14085290 14085591 -131503697 + MER63C DNA MER1_type 1 310 -620 834 168 114 0 chr10 14085986 14086135 -131503153 - MER5A DNA MER1_type 0 189 24 2046 131 0 0 chr10 14086398 14086680 -131502608 + AluSx SINE Alu 1 282 -30 1452 177 13 55 chr10 14087829 14088139 -131501149 + AluJo SINE Alu 7 303 -9 993 174 40 5 chr10 14088381 14088582 -131500706 + MER63C DNA MER1_type 277 484 -446 1857 123 0 0 chr10 14088584 14088836 -131500452 + AluSx SINE Alu 37 288 -24 21 0 0 0 chr10 14088839 14088860 -131500428 + AT_rich Low_complexity Low_complexity 1 21 0 431 242 32 48 chr10 14088860 14088984 -131500304 + MER20 DNA MER1_type 1 122 -97 519 118 147 10 chr10 14089030 14089132 -131500156 + MER63C DNA MER1_type 480 595 -335 2415 153 53 79 chr10 14089133 14089348 -131499940 + MLT2B2 LTR ERVL 1 220 -295 706 143 76 0 chr10 14089348 14089467 -131499821 - FLAM_C SINE Alu -5 128 1 2415 153 53 79 chr10 14089467 14089780 -131499508 + MLT2B2 LTR ERVL 220 515 0 1328 230 44 0 chr10 14089780 14090091 -131499197 + MER63C DNA MER1_type 592 916 -14 906 254 0 0 chr10 14090477 14090666 -131498622 + MER5A DNA MER1_type 1 189 0 858 243 44 47 chr10 14091259 14091597 -131497691 - L1ME4a LINE L1 -69 6052 5716 879 189 0 0 chr10 14091603 14091756 -131497532 - FRAM SINE Alu -11 165 13 2374 79 23 0 chr10 14091882 14092186 -131497102 - AluSx SINE Alu -1 311 1 2146 117 0 0 chr10 14092655 14092964 -131496324 - AluSx SINE Alu 0 309 1 3514 139 19 3 chr10 14094253 14094843 -131494445 + MER51C LTR ERV1 1 639 -1 2247 70 35 0 chr10 14095063 14095349 -131493939 + AluSx SINE Alu 2 297 -15 1167 126 6 0 chr10 14095356 14095531 -131493757 + FRAM SINE Alu 1 174 -2 888 164 13 19 chr10 14095747 14095906 -131493382 - Charlie1a DNA MER1_type -4 1451 1294 * 2392 184 68 17 chr10 14095890 14096432 -131492856 - Charlie1a DNA MER1_type -629 826 257 698 239 72 11 chr10 14096449 14096629 -131492659 - Charlie1a DNA MER1_type -1249 206 16 23 0 0 0 chr10 14097078 14097101 -131492187 + AT_rich Low_complexity Low_complexity 1 23 0 2272 71 27 17 chr10 14097251 14097380 -131491908 + AluY SINE Alu 1 127 -184 180 0 0 0 chr10 14097380 14097400 -131491888 + (TA)n Simple_repeat Simple_repeat 2 21 0 2272 71 27 17 chr10 14097400 14097566 -131491722 + AluY SINE Alu 127 299 -12 494 246 30 22 chr10 14097646 14097780 -131491508 - MIR SINE MIR -112 150 16 191 291 127 27 chr10 14097955 14098065 -131491223 - MIR SINE MIR -122 140 20 616 266 57 13 chr10 14099803 14100032 -131489256 + L1M4 LINE L1 4745 4983 -1163 374 327 203 22 chr10 14100203 14100898 -131488390 - L2 LINE L2 -1252 2062 1242 4390 183 157 20 chr10 14100955 14102196 -131487092 - Charlie1a DNA MER1_type -8 1447 37 244 288 67 34 chr10 14102454 14102633 -131486655 + MIR SINE MIR 9 191 -51 371 287 99 86 chr10 14103022 14103336 -131485952 - L1MC4 LINE L1 -395 7647 7330 496 212 35 0 chr10 14103690 14103803 -131485485 + AluJb SINE Alu 191 307 -5 23 0 0 0 chr10 14104723 14104746 -131484542 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr10 14105497 14105527 -131483761 + AT_rich Low_complexity Low_complexity 1 30 0 30 27 0 0 chr10 14107547 14107584 -131481704 + AT_rich Low_complexity Low_complexity 1 37 0 619 269 57 66 chr10 14107646 14107698 -131481590 - L1ME4a LINE L1 -296 5825 5774 2322 107 0 13 chr10 14107698 14108008 -131481280 - AluSx SINE Alu -6 306 1 619 269 57 66 chr10 14108008 14108304 -131480984 - L1ME4a LINE L1 -347 5774 5480 430 258 132 6 chr10 14108618 14108777 -131480511 + MIR SINE MIR 84 262 0 510 272 55 85 chr10 14108793 14109252 -131480036 - L1MC/D LINE L1 -2032 5776 5332 1882 146 3 0 chr10 14109672 14109959 -131479329 - AluSx SINE Alu -24 288 1 243 0 0 0 chr10 14110222 14110249 -131479039 + (TGG)n Simple_repeat Simple_repeat 2 28 0 239 371 67 9 chr10 14110275 14110380 -131478908 - L3b LINE CR1 -1 1582 1472 1017 275 140 32 chr10 14110619 14111142 -131478146 + L3 LINE CR1 997 1575 -2 21 0 0 0 chr10 14111353 14111374 -131477914 + AT_rich Low_complexity Low_complexity 1 21 0 2364 73 7 3 chr10 14112229 14112530 -131476758 + AluSc SINE Alu 1 302 -7 1556 208 162 81 chr10 14112816 14112931 -131476357 - L1ME2 LINE L1 -32 6132 6028 1038 86 40 0 chr10 14112931 14113082 -131476206 + L1PA11 LINE L1 6014 6170 -4 1556 208 162 81 chr10 14113082 14113382 -131475906 - L1ME2 LINE L1 -136 6028 5754 2509 79 0 0 chr10 14113382 14113686 -131475602 + AluSc SINE Alu 1 304 -5 1556 208 162 81 chr10 14113686 14114009 -131475279 - L1ME2 LINE L1 -410 5754 5333 871 211 0 0 chr10 14114010 14114166 -131475122 - AluJb SINE Alu -3 309 154 760 199 24 127 chr10 14114168 14114358 -131474930 - L1ME2 LINE L1 -816 5330 5195 1508 154 28 0 chr10 14114358 14114605 -131474683 - AluJo SINE Alu -25 287 34 760 199 24 127 chr10 14114605 14114785 -131474503 - L1ME2 LINE L1 -951 5195 4998 480 212 171 0 chr10 14114784 14114954 -131474334 - L1ME2 LINE L1 -3399 2747 2549 * 225 179 0 0 chr10 14114954 14114993 -131474295 - MLT1H1 LTR MaLR -6 549 511 315 400 30 4 chr10 14115719 14115954 -131473334 + MIR SINE MIR 12 252 -10 468 303 117 6 chr10 14116197 14116359 -131472929 - MIR SINE MIR -78 184 5 318 272 98 36 chr10 14117454 14117838 -131471450 - L1ME2 LINE L1 -280 5884 5461 806 171 24 0 chr10 14118161 14118325 -131470963 - L1MB7 LINE L1 0 6184 6017 2274 117 0 0 chr10 14118813 14119111 -131470177 - AluSq SINE Alu -15 298 1 1645 143 81 7 chr10 14119212 14119362 -131469926 - AluSx SINE Alu -20 292 154 224 30 30 0 chr10 14119362 14119395 -131469893 + (TTTA)n Simple_repeat Simple_repeat 1 34 0 1645 143 81 7 chr10 14119395 14119516 -131469772 - AluSx SINE Alu -158 154 1 782 150 133 23 chr10 14119554 14119727 -131469561 - AluJo SINE Alu -4 308 117 568 343 98 35 chr10 14124799 14125277 -131464011 + L3 LINE CR1 398 917 -660 1875 163 40 0 chr10 14125277 14125577 -131463711 + AluJo SINE Alu 1 312 0 568 343 98 35 chr10 14125577 14125646 -131463642 + L3 LINE CR1 917 980 -597 415 259 0 0 chr10 14125668 14125749 -131463539 + L2 LINE L2 3233 3313 0 1698 147 58 25 chr10 14125842 14126168 -131463120 - MER1B DNA MER1_type 0 337 1 254 156 31 16 chr10 14126256 14126320 -131462968 - L1MD2 LINE L1 -1 6358 6294 406 210 56 68 chr10 14126695 14126857 -131462431 - Charlie8 DNA MER1_type -2218 199 40 478 242 242 0 chr10 14127070 14127248 -131462040 - MER58A DNA MER1_type 0 224 4 557 197 69 64 chr10 14127403 14127606 -131461682 - L1ME3 LINE L1 -44 6118 5915 821 310 68 2 chr10 14128138 14128535 -131460753 + LTR33 LTR ERVL 20 442 -79 2531 46 0 10 chr10 14129848 14130152 -131459136 + AluY SINE Alu 1 301 -10 361 68 85 0 chr10 14130849 14130908 -131458380 - L1MB2 LINE L1 -7 6164 6101 1703 152 35 10 chr10 14130919 14131209 -131458079 - AluSx SINE Alu -15 297 1 1786 266 127 30 chr10 14131534 14131983 -131457305 + HAL1 LINE L1 520 924 -1583 1727 132 82 0 chr10 14131983 14132263 -131457025 + AluJo SINE Alu 1 303 -9 1786 266 127 30 chr10 14132263 14132844 -131456444 + HAL1 LINE L1 924 1650 -857 473 279 71 7 chr10 14132912 14133052 -131456236 - MIR SINE MIR -80 182 34 564 258 145 59 chr10 14133081 14133710 -131455578 + HAL1 LINE L1 1753 2435 -72 1141 260 43 11 chr10 14133765 14134115 -131455173 + L2 LINE L2 2444 2804 -510 618 277 41 23 chr10 14134103 14134323 -131454965 + L2 LINE L2 3084 3307 -6 * 1318 169 113 3 chr10 14135265 14135567 -131453721 + MER2 DNA MER2_type 1 335 -10 939 312 129 23 chr10 14135683 14136289 -131452999 + L3 LINE CR1 433 1102 -475 596 278 30 48 chr10 14136542 14136646 -131452642 - L1ME3 LINE L1 -223 5947 5843 991 154 19 43 chr10 14136646 14136854 -131452434 - MER105 DNA DNA -1 203 1 596 278 30 48 chr10 14136854 14137083 -131452205 - L1ME3 LINE L1 -327 5843 5620 247 260 130 13 chr10 14137085 14137162 -131452126 + L3 LINE CR1 1092 1177 -400 31 0 0 0 chr10 14137669 14137700 -131451588 + AT_rich Low_complexity Low_complexity 1 31 0 568 275 103 24 chr10 14138270 14138520 -131450768 + MIR SINE MIR 3 261 -1 2370 60 0 0 chr10 14138991 14139272 -131450016 + AluY SINE Alu 1 281 -30 470 237 136 35 chr10 14141581 14141809 -131447479 + MER112 DNA MER1_type 8 258 -2 5841 98 3 6 chr10 14141809 14142681 -131446607 - L1PA11 LINE L1 -2 6172 5303 1945 141 11 0 chr10 14143072 14143356 -131445932 + AluJb SINE Alu 1 287 -25 392 196 131 80 chr10 14143517 14143716 -131445572 - L1ME3A LINE L1 -8 6162 5954 533 142 92 8 chr10 14143738 14143858 -131445430 - L1MB8 LINE L1 -24 6154 6025 1267 232 129 46 chr10 14143875 14144547 -131444741 - L1ME3A LINE L1 -216 5946 5206 316 291 47 58 chr10 14144867 14145220 -131444068 + MLT1L LTR MaLR 1 349 -162 195 42 0 0 chr10 14145227 14145251 -131444037 + (T)n Simple_repeat Simple_repeat 1 24 0 1939 209 39 50 chr10 14145294 14145812 -131443476 - MLT2B1 LTR ERVL -8 512 1 1014 248 198 7 chr10 14146644 14147204 -131442084 + LTR50 LTR ERVL 2 668 -127 224 204 51 92 chr10 14148034 14148132 -131441156 + L2 LINE L2 3142 3235 -78 2220 237 53 43 chr10 14148138 14148831 -131440457 - L2 LINE L2 -819 2495 1796 24 32 0 0 chr10 14153111 14153142 -131436146 + AT_rich Low_complexity Low_complexity 1 31 0 454 248 153 19 chr10 14154095 14154252 -131435036 - MER5B DNA MER1_type 0 178 1 245 231 0 51 chr10 14157177 14157255 -131432033 + (TATG)n Simple_repeat Simple_repeat 2 75 0 287 232 14 0 chr10 14157947 14158016 -131431272 - MER5A DNA MER1_type -87 102 33 1434 113 96 29 chr10 14158245 14158485 -131430803 + AluSx SINE Alu 36 291 -21 777 209 11 39 chr10 14159542 14159724 -131429564 - MER5A DNA MER1_type 0 189 13 418 332 100 26 chr10 14159732 14159961 -131429327 + MIR SINE MIR 9 254 -8 1754 120 76 0 chr10 14160053 14160303 -131428985 + AluSx SINE Alu 21 289 -23 1507 185 67 20 chr10 14162728 14163026 -131426262 + AluJo SINE Alu 1 312 0 2313 119 0 3 chr10 14163462 14163773 -131425515 + AluSx SINE Alu 1 310 -2 186 208 0 0 chr10 14165570 14165618 -131423670 + (CAAGC)n Simple_repeat Simple_repeat 4 51 0 276 228 174 65 chr10 14165817 14165909 -131423379 + L2 LINE L2 3212 3313 0 214 200 0 0 chr10 14167201 14167241 -131422047 + (TTA)n Simple_repeat Simple_repeat 1 40 0 1661 133 82 14 chr10 14167786 14168065 -131421223 + AluJb SINE Alu 1 298 -14 232 344 12 28 chr10 14168901 14169078 -131420210 - MIR SINE MIR -59 149 19 1058 152 1 111 chr10 14169519 14169564 -131419724 - L1MB3 LINE L1 -6 6177 6129 938 219 18 0 chr10 14169564 14169733 -131419555 - FAM SINE Alu -3 172 1 2277 89 38 0 chr10 14169740 14170031 -131419257 - AluSp SINE Alu -11 302 1 1058 152 1 111 chr10 14170031 14170256 -131419032 - L1MB3 LINE L1 -60 6123 5930 2269 123 3 0 chr10 14171760 14172070 -131417218 - AluSx SINE Alu -1 311 1 364 302 47 8 chr10 14173767 14173896 -131415392 - MIR SINE MIR -4 258 125 2146 106 19 32 chr10 14173915 14174227 -131415061 - AluSx SINE Alu -4 308 1 207 0 0 0 chr10 14174630 14174653 -131414635 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 198 103 0 0 chr10 14175408 14175437 -131413851 + (CA)n Simple_repeat Simple_repeat 2 30 0 206 205 48 121 chr10 14175637 14175720 -131413568 - L2 LINE L2 -1 3312 3236 * 244 308 0 13 chr10 14175691 14175769 -131413519 - MIR SINE MIR -169 93 17 2355 98 0 7 chr10 14175987 14176284 -131413004 + AluSx SINE Alu 1 295 -17 277 329 13 0 chr10 14176864 14176943 -131412345 + (TG)n Simple_repeat Simple_repeat 1 80 0 2071 138 27 0 chr10 14178584 14178882 -131410406 - AluJb SINE Alu -6 306 1 2231 102 10 0 chr10 14180220 14180515 -131408773 - AluSx SINE Alu -14 298 1 256 306 170 7 chr10 14180563 14180710 -131408578 - L1ME4a LINE L1 -2 6119 5949 280 342 33 26 chr10 14180881 14181033 -131408255 + L3b LINE CR1 1316 1468 -115 2379 69 6 41 chr10 14181069 14181389 -131407899 - AluSq SINE Alu -4 309 1 377 278 169 12 chr10 14181475 14181730 -131407558 + L1M4 LINE L1 4375 4669 -1477 212 325 146 16 chr10 14182167 14182290 -131406998 - L3b LINE CR1 -320 1263 1125 230 266 17 17 chr10 14183227 14183313 -131405975 + MIR SINE MIR 30 115 -93 1900 142 53 0 chr10 14183599 14183937 -131405351 - L1MA5A LINE L1 -3 6294 5939 2200 115 3 19 chr10 14183956 14184270 -131405018 + AluSg1 SINE Alu 1 309 0 333 0 0 0 chr10 14184288 14184325 -131404963 + (CA)n Simple_repeat Simple_repeat 2 38 0 884 124 23 0 chr10 14184988 14185117 -131404171 + AluJb SINE Alu 1 132 -180 2152 109 3 26 chr10 14185259 14185571 -131403717 + AluSg SINE Alu 1 305 -5 789 148 55 0 chr10 14185579 14185707 -131403581 + AluJo SINE Alu 2 136 -176 208 292 180 19 chr10 14185731 14185892 -131403396 + MIR3 SINE MIR 19 205 -3 291 114 0 0 chr10 14186361 14186405 -131402883 + (TA)n Simple_repeat Simple_repeat 2 45 0 631 316 42 0 chr10 14186518 14186736 -131402552 + MIR SINE MIR 37 262 0 1600 187 3 17 chr10 14186751 14187040 -131402248 + AluJo SINE Alu 1 285 -27 2346 104 0 28 chr10 14187303 14187621 -131401667 - AluSg SINE Alu -1 309 1 180 328 0 0 chr10 14187637 14187695 -131401593 - MIR SINE MIR -170 92 35 1022 70 23 0 chr10 14187869 14187997 -131401291 - AluSg/x SINE Alu -49 263 133 1741 178 0 38 chr10 14188116 14188430 -131400858 + AluJo SINE Alu 1 302 -10 2359 88 14 0 chr10 14188526 14188822 -131400466 - AluSx SINE Alu -12 300 1 853 113 40 0 chr10 14190500 14190624 -131398664 + FRAM SINE Alu 26 154 -22 2035 124 0 17 chr10 14191822 14192120 -131397168 + AluSx SINE Alu 1 293 -19 3624 42 0 0 chr10 14192934 14193368 -131395920 + L1PA4 LINE L1 5719 6152 -3 1765 168 44 13 chr10 14193518 14193816 -131395472 - AluSg SINE Alu -3 307 1 2044 112 4 0 chr10 14194125 14194393 -131394895 - AluSx SINE Alu -37 275 7 459 223 65 14 chr10 14194425 14194564 -131394724 - MER69 DNA AcHobo -1079 147 2 1808 124 20 36 chr10 14194817 14195123 -131394165 - AluJb SINE Alu -11 301 1 189 232 138 80 chr10 14195137 14195275 -131394013 + L2 LINE L2 2339 2484 -830 1462 141 33 0 chr10 14196600 14196813 -131392475 + AluJo SINE Alu 85 304 -8 2208 110 14 0 chr10 14197098 14197390 -131391898 - AluSx SINE Alu -16 296 1 375 273 67 77 chr10 14198368 14198410 -131390878 + MIR SINE MIR 16 57 -205 1953 125 7 30 chr10 14198410 14198707 -131390581 + AluSx SINE Alu 1 290 -22 375 273 67 77 chr10 14198707 14198858 -131390430 + MIR SINE MIR 57 207 -55 2043 122 30 10 chr10 14199102 14199397 -131389891 - AluSx SINE Alu -11 301 1 220 214 0 0 chr10 14200037 14200079 -131389209 + GA-rich Low_complexity Low_complexity 1 42 0 2006 121 0 65 chr10 14201004 14201326 -131387962 - AluSx SINE Alu -11 301 1 902 132 0 22 chr10 14202061 14202197 -131387091 - FLAM_C SINE Alu 0 133 1 225 0 0 0 chr10 14202770 14202795 -131386493 + (T)n Simple_repeat Simple_repeat 1 25 0 1827 148 31 3 chr10 14204023 14204313 -131384975 - AluSx SINE Alu -14 298 1 288 154 0 0 chr10 14204478 14204530 -131384758 + (TG)n Simple_repeat Simple_repeat 1 52 0 681 212 28 22 chr10 14205661 14205719 -131383569 + L1MA4A LINE L1 6124 6180 -123 1913 100 0 0 chr10 14205719 14205985 -131383303 + AluSc SINE Alu 47 312 0 681 212 28 22 chr10 14205985 14206102 -131383186 + L1MA4A LINE L1 6180 6303 0 442 254 7 58 chr10 14206593 14206731 -131382557 + MIR SINE MIR 4 134 -128 1821 150 11 21 chr10 14206745 14207031 -131382257 + AluJo SINE Alu 9 291 -21 294 87 0 0 chr10 14208915 14208961 -131380327 + (CA)n Simple_repeat Simple_repeat 2 47 0 237 65 0 0 chr10 14209439 14209470 -131379818 + (CA)n Simple_repeat Simple_repeat 2 32 0 392 340 0 33 chr10 14211085 14211151 -131378137 + MIR SINE MIR 8 75 -187 2084 129 0 3 chr10 14211151 14211445 -131377843 - AluSx SINE Alu -19 293 1 392 340 0 33 chr10 14211445 14211528 -131377760 + MIR SINE MIR 75 152 -110 418 219 114 0 chr10 14211907 14212012 -131377276 + MER45 DNA AcHobo 1 117 -61 723 108 45 0 chr10 14212074 14212185 -131377103 - L1PB1 LINE L1 -4 6147 6032 336 188 0 0 chr10 14212194 14212258 -131377030 + MER45 DNA AcHobo 1518 1581 0 2060 151 0 3 chr10 14212912 14213216 -131376072 + AluSx SINE Alu 1 303 -9 325 246 85 17 chr10 14213975 14214093 -131375195 - MIR SINE MIR -135 127 2 2161 132 26 0 chr10 14214421 14214725 -131374563 + AluSx SINE Alu 1 312 0 288 345 34 0 chr10 14214829 14214948 -131374340 + MIR3 SINE MIR 32 154 -54 352 300 108 8 chr10 14215390 14215520 -131373768 - MIR3 SINE MIR -47 161 19 346 291 71 57 chr10 14215897 14216038 -131373250 - L1MC4 LINE L1 -1286 6756 6614 * 364 239 33 33 chr10 14215999 14216091 -131373197 + L1MC4 LINE L1 6612 6703 -1339 343 259 158 67 chr10 14216063 14216250 -131373038 + L1MC4 LINE L1 5768 5937 -796 * 2153 106 0 11 chr10 14216250 14216532 -131372756 - AluSx SINE Alu -21 291 13 343 259 158 67 chr10 14216532 14216641 -131372647 + L1MC4 LINE L1 5937 6703 -30 2325 105 0 3 chr10 14216939 14217245 -131372043 + AluSg SINE Alu 1 305 -5 195 226 333 10 chr10 14217350 14217452 -131371836 + MIR SINE MIR 16 150 -58 683 242 172 14 chr10 14217580 14217795 -131371493 + MIR SINE MIR 1 249 -13 2142 122 3 3 chr10 14217814 14218110 -131371178 + AluSx SINE Alu 10 305 -7 192 333 11 33 chr10 14219227 14219317 -131369971 + MIR SINE MIR 42 129 -133 2202 136 0 13 chr10 14219482 14219792 -131369496 - AluSx SINE Alu -6 306 1 180 0 0 0 chr10 14219795 14219815 -131369473 + (T)n Simple_repeat Simple_repeat 1 20 0 295 264 14 14 chr10 14221087 14221159 -131368129 + L2 LINE L2 3201 3272 0 343 236 45 45 chr10 14221199 14221309 -131367979 - MIR SINE MIR -82 126 17 2272 110 0 0 chr10 14222236 14222527 -131366761 - AluSx SINE Alu -21 291 1 497 288 132 47 chr10 14222641 14222960 -131366328 - L2 LINE L2 -1 3312 2967 721 189 7 13 chr10 14223024 14223191 -131366097 + L1MB8 LINE L1 5772 5932 -250 548 130 0 20 chr10 14223299 14223399 -131365889 + L1MB8 LINE L1 5916 6013 -165 2172 119 3 0 chr10 14223502 14223796 -131365492 + AluSq SINE Alu 1 295 -18 1944 145 0 44 chr10 14224530 14224848 -131364440 - AluJo SINE Alu -8 304 1 259 287 0 44 chr10 14225128 14225309 -131363979 + (CTAG)n Simple_repeat Simple_repeat 1 173 0 285 289 0 39 chr10 14225359 14225539 -131363749 + (CTAG)n Simple_repeat Simple_repeat 4 176 0 1283 167 76 4 chr10 14225657 14225921 -131363367 + L1MB2 LINE L1 5889 6171 0 2403 72 0 0 chr10 14226409 14226701 -131362587 + AluY SINE Alu 1 292 -19 196 204 184 0 chr10 14227469 14227518 -131361770 - MIR3 SINE MIR -44 164 107 269 211 0 0 chr10 14228235 14228287 -131361001 - MIR SINE MIR -116 146 95 1413 137 5 0 chr10 14228382 14228615 -131360673 + AluJo SINE Alu 88 312 0 703 186 29 103 chr10 14228815 14228939 -131360349 - MER5A DNA MER1_type 0 189 57 1197 156 183 16 chr10 14228939 14229196 -131360092 - AluJo SINE Alu -2 300 1 2027 129 7 26 chr10 14229201 14229504 -131359784 - AluSx SINE Alu -15 297 1 703 186 29 103 chr10 14229504 14229577 -131359711 - MER5A DNA MER1_type -136 53 1 747 257 80 59 chr10 14229641 14229980 -131359308 + LTR16A LTR ERVL 105 450 0 651 111 0 0 chr10 14230098 14230188 -131359100 + 5S rRNA rRNA 1 90 -31 400 306 89 0 chr10 14230239 14230363 -131358925 + L2 LINE L2 3138 3272 0 2345 100 7 3 chr10 14230873 14231174 -131358114 - AluSx SINE Alu -10 302 1 24 0 0 0 chr10 14231390 14231414 -131357874 + GC_rich Low_complexity Low_complexity 1 24 0 2129 113 0 45 chr10 14233034 14233343 -131355945 + AluSx SINE Alu 1 295 -17 2444 92 0 0 chr10 14233669 14233972 -131355316 + AluSq SINE Alu 1 303 -10 185 286 107 48 chr10 14235199 14235367 -131353921 + MER5B DNA MER1_type 1 178 0 384 242 76 64 chr10 14235690 14235744 -131353544 + MER69A DNA AcHobo 19 71 -2455 1988 88 53 21 chr10 14235744 14236029 -131353259 - AluSq SINE Alu -19 294 1 384 242 76 64 chr10 14236029 14236131 -131353157 + MER69A DNA AcHobo 71 177 0 318 246 169 31 chr10 14236259 14236454 -131352834 + L2 LINE L2 2263 2484 -830 220 224 0 132 chr10 14237076 14237122 -131352166 + L2 LINE L2 3248 3282 -31 2357 102 3 0 chr10 14237122 14237475 -131351813 - AluSx SINE Alu 0 312 1 220 224 0 132 chr10 14237475 14237504 -131351784 + L2 LINE L2 3282 3313 0 2053 115 7 0 chr10 14238174 14238488 -131350800 + AluSx SINE Alu 1 316 0 2200 133 0 0 chr10 14239392 14239692 -131349596 - AluSx SINE Alu -12 300 1 2296 114 0 0 chr10 14240924 14241223 -131348065 - AluSx SINE Alu -13 299 1 2446 88 3 0 chr10 14242120 14242425 -131346863 + AluSx SINE Alu 1 306 -6 2373 116 0 0 chr10 14243126 14243429 -131345859 - AluSx SINE Alu -9 303 1 2114 143 3 3 chr10 14243470 14243778 -131345510 + AluJo SINE Alu 1 308 -4 2066 125 7 0 chr10 14244160 14244457 -131344831 - AluSx SINE Alu -13 299 1 2027 179 0 0 chr10 14244817 14245118 -131344170 - AluSx SINE Alu -11 301 1 191 254 36 0 chr10 14246596 14246651 -131342637 + MIR SINE MIR 78 134 -74 1431 159 19 0 chr10 14247253 14247511 -131341777 + L1MA4 LINE L1 6032 6294 -6 2028 108 21 14 chr10 14248508 14248796 -131340492 - AluSc SINE Alu -7 302 13 2261 76 31 14 chr10 14249552 14249840 -131339448 + AluSx SINE Alu 1 293 -19 216 0 0 0 chr10 14249857 14249881 -131339407 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 1309 149 0 21 chr10 14250654 14250889 -131338399 - MER46A DNA MER2_type -6 230 1 1408 142 26 13 chr10 14250951 14251184 -131338104 + MER46A DNA MER2_type 1 236 0 205 370 33 47 chr10 14251238 14251449 -131337839 - L3 LINE CR1 -2 1575 1368 1478 181 140 0 chr10 14252001 14252266 -131337022 + AluJb SINE Alu 1 302 0 982 130 0 22 chr10 14252275 14252459 -131336829 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1914 172 0 22 chr10 14254023 14254342 -131334946 + AluJo SINE Alu 1 312 0 433 232 0 0 chr10 14304839 14304921 -131284367 - AluJ/FLAM SINE Alu -229 83 2 1745 173 25 31 chr10 14305707 14306097 -131283191 + MLT1B LTR MaLR 1 590 -3 1741 150 4 0 chr10 14306124 14306397 -131282891 + AluJb SINE Alu 3 276 -36 1448 287 44 68 chr10 14306572 14307275 -131282013 + MER21B LTR ERV1 24 709 -154 368 282 74 37 chr10 14307761 14307924 -131281364 - MIR SINE MIR -74 188 20 624 135 0 0 chr10 14308051 14308147 -131281141 + FRAM SINE Alu 77 172 -4 544 219 57 0 chr10 14308490 14308613 -131280675 - MER5A DNA MER1_type -59 130 1 298 256 48 48 chr10 14308726 14308790 -131280498 + MLT1L LTR MaLR 250 316 -299 2020 123 0 3 chr10 14308790 14309091 -131280197 - AluSx SINE Alu -12 300 1 298 256 48 48 chr10 14309091 14309151 -131280137 + MLT1L LTR MaLR 315 374 -241 323 237 9 0 chr10 14309374 14309488 -131279800 + (TG)n Simple_repeat Simple_repeat 1 115 0 239 274 137 29 chr10 14310831 14310933 -131278355 - MIR SINE MIR -102 160 48 511 241 4 171 chr10 14310951 14311208 -131278080 - MIR SINE MIR -32 230 17 955 226 28 14 chr10 14311227 14311439 -131277849 + MIR SINE MIR 31 245 -17 462 45 152 0 chr10 14311522 14311588 -131277700 + MADE1 DNA Mariner 1 76 -4 357 131 0 0 chr10 14312784 14312845 -131276443 + (TCCC)n Simple_repeat Simple_repeat 1 61 0 287 254 0 0 chr10 14313621 14313688 -131275600 - MER116 DNA Mariner -5 75 9 375 60 0 0 chr10 14313882 14313932 -131275356 + (TG)n Simple_repeat Simple_repeat 2 51 0 2079 98 10 0 chr10 14314775 14315071 -131274217 - AluSq SINE Alu -14 299 1 243 88 0 0 chr10 14315114 14315148 -131274140 + (A)n Simple_repeat Simple_repeat 1 34 0 2130 113 0 3 chr10 14315342 14315652 -131273636 - AluSx SINE Alu -3 309 1 817 180 0 18 chr10 14315751 14315918 -131273370 - AluJb SINE Alu -13 299 136 449 329 19 6 chr10 14315918 14316076 -131273212 + MIR SINE MIR 101 260 -2 1469 158 64 8 chr10 14316158 14316511 -131272777 - AluJb SINE Alu 0 368 1 1641 137 44 0 chr10 14317474 14317745 -131271543 + AluSx SINE Alu 22 304 -8 526 270 63 31 chr10 14317749 14317971 -131271317 - L1MA9 LINE L1 -76 6236 6008 1730 178 0 6 chr10 14318022 14318336 -131270952 - AluJb SINE Alu 0 312 1 192 117 58 39 chr10 14318337 14318440 -131270848 + (TATAA)n Simple_repeat Simple_repeat 5 109 0 1565 205 18 12 chr10 14319180 14319516 -131269772 + MER58B DNA MER1_type 4 341 0 1142 160 0 31 chr10 14319571 14319796 -131269492 + AluJo SINE Alu 95 312 0 277 246 0 0 chr10 14321340 14321397 -131267891 + L2 LINE L2 3256 3312 -1 1003 190 88 19 chr10 14322009 14322248 -131267040 + AluJb SINE Alu 53 306 0 797 164 7 33 chr10 14322630 14322782 -131266506 - MER3 DNA MER1_type -57 152 5 1847 132 14 10 chr10 14322985 14323280 -131266008 - AluSx SINE Alu -16 296 1 895 128 0 13 chr10 14323281 14323430 -131265858 - L1MA10 LINE L1 -7 6327 6181 330 26 0 0 chr10 14323430 14323469 -131265819 + (TG)n Simple_repeat Simple_repeat 1 39 0 1571 139 60 4 chr10 14323481 14323779 -131265509 + AluJb SINE Alu 1 313 0 314 303 86 46 chr10 14324033 14324208 -131265080 - MIR3 SINE MIR -8 200 19 2373 89 0 6 chr10 14324347 14324662 -131264626 - AluSq SINE Alu 0 313 1 2186 108 0 0 chr10 14326038 14326343 -131262945 + AluSc SINE Alu 1 305 -4 1923 153 0 0 chr10 14326484 14326784 -131262504 - AluSx SINE Alu -12 300 1 204 40 0 0 chr10 14327323 14327348 -131261940 + (TG)n Simple_repeat Simple_repeat 1 25 0 244 258 67 79 chr10 14327951 14328110 -131261178 + MIR SINE MIR 54 210 -52 1460 76 0 10 chr10 14328231 14328429 -131260859 - AluY SINE Alu -8 303 108 345 47 0 0 chr10 14328455 14328498 -131260790 + (TG)n Simple_repeat Simple_repeat 2 44 0 2087 189 59 47 chr10 14328515 14328563 -131260725 + MLT2B1 LTR ERVL 6 52 -468 1902 137 0 3 chr10 14328563 14328855 -131260433 - AluSx SINE Alu -21 291 1 2087 189 59 47 chr10 14328855 14329315 -131259973 + MLT2B1 LTR ERVL 52 520 0 1912 139 3 3 chr10 14329679 14329980 -131259308 - AluJo SINE Alu -2 310 10 1491 153 38 24 chr10 14330331 14330618 -131258670 - AluJo SINE Alu -21 291 1 220 254 0 17 chr10 14330792 14330851 -131258437 - L2 LINE L2 -7 3265 3208 1592 135 50 25 chr10 14331043 14331165 -131258123 + AluSx SINE Alu 1 118 -194 259 44 44 0 chr10 14331165 14331210 -131258078 + (CAAAA)n Simple_repeat Simple_repeat 3 49 0 1592 135 50 25 chr10 14331210 14331369 -131257919 + AluSx SINE Alu 118 289 -23 203 33 115 0 chr10 14331369 14331430 -131257858 + (TA)n Simple_repeat Simple_repeat 1 68 0 55 0 0 0 chr10 14331430 14331485 -131257803 + AT_rich Low_complexity Low_complexity 1 55 0 3007 172 97 27 chr10 14331548 14331904 -131257384 + LTR51 LTR ERV1 1 331 -340 3038 94 22 0 chr10 14331904 14332350 -131256938 + L1MA2 LINE L1 5849 6304 0 3007 172 97 27 chr10 14332350 14332620 -131256668 + LTR51 LTR ERV1 331 671 0 3143 239 120 73 chr10 14333789 14335352 -131253936 + HAL1 LINE L1 636 2295 -212 1729 161 0 26 chr10 14335352 14335656 -131253632 - AluJb SINE Alu -16 296 1 3143 239 120 73 chr10 14335656 14335879 -131253409 + HAL1 LINE L1 2295 2506 -1 330 379 9 13 chr10 14336182 14336409 -131252879 - MIR SINE MIR -24 238 13 221 327 62 18 chr10 14336486 14336599 -131252689 + MIR SINE MIR 98 215 -47 2184 74 0 14 chr10 14337037 14337333 -131251955 - AluSg SINE Alu -5 305 14 183 246 45 82 chr10 14337458 14337568 -131251720 - MIR SINE MIR -46 216 111 291 28 0 0 chr10 14337844 14337880 -131251408 + (TG)n Simple_repeat Simple_repeat 2 37 0 857 58 0 0 chr10 14338110 14338214 -131251074 + L1PA7 LINE L1 6048 6151 -3 189 0 0 0 chr10 14338250 14338271 -131251017 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 1983 138 3 0 chr10 14338282 14338579 -131250709 + AluSg SINE Alu 1 298 -12 226 276 40 13 chr10 14339048 14339124 -131250164 + MIR SINE MIR 154 231 -31 2132 114 0 3 chr10 14339289 14339586 -131249702 + AluSx SINE Alu 1 296 -16 4363 143 17 57 chr10 14339767 14340266 -131249022 + L1MB3 LINE L1 5334 5852 -331 1928 139 13 3 chr10 14340266 14340575 -131248713 + AluJb SINE Alu 1 312 0 4363 143 17 57 chr10 14340575 14340614 -131248674 + L1MB3 LINE L1 5852 5891 -292 2157 133 0 0 chr10 14340614 14340923 -131248365 - AluSx SINE Alu -3 309 1 4363 143 17 57 chr10 14340923 14341209 -131248079 + L1MB3 LINE L1 5891 6125 -58 798 137 0 0 chr10 14341209 14341340 -131247948 + L1PB1 LINE L1 6021 6151 0 4363 143 17 57 chr10 14341340 14341384 -131247904 + L1MB3 LINE L1 6125 6169 -14 216 0 0 0 chr10 14341668 14341692 -131247596 + (TTA)n Simple_repeat Simple_repeat 2 25 0 2166 106 0 0 chr10 14341694 14341987 -131247301 - AluSc SINE Alu -16 293 1 21 36 0 0 chr10 14342031 14342059 -131247229 + AT_rich Low_complexity Low_complexity 1 28 0 1426 182 76 3 chr10 14342622 14342913 -131246375 - AluJb SINE Alu 0 312 1 231 220 180 20 chr10 14343477 14343577 -131245711 + MIR SINE MIR 35 150 -58 2125 96 0 7 chr10 14343951 14344254 -131245034 + AluSx SINE Alu 1 301 -11 33 25 0 0 chr10 14344826 14344866 -131244422 + AT_rich Low_complexity Low_complexity 1 40 0 5645 56 0 0 chr10 14344873 14345551 -131243737 - L1PA5 LINE L1 -7 6147 5470 2182 86 0 3 chr10 14345578 14345868 -131243420 + AluSq SINE Alu 12 300 -13 188 215 31 0 chr10 14345915 14345980 -131243308 + GA-rich Low_complexity Low_complexity 3 69 0 1587 184 11 0 chr10 14346700 14346983 -131242305 - AluJb SINE Alu -6 306 21 371 101 0 101 chr10 14347037 14347106 -131242182 + AluSx SINE Alu 1 62 -238 186 43 0 0 chr10 14347112 14347135 -131242153 + (A)n Simple_repeat Simple_repeat 1 23 0 2037 180 122 4 chr10 14347349 14347816 -131241472 + MER74A LTR ERVL 34 555 -3 288 0 0 0 chr10 14348803 14348835 -131240453 + (CA)n Simple_repeat Simple_repeat 1 32 0 329 0 24 0 chr10 14349014 14349055 -131240233 + (TG)n Simple_repeat Simple_repeat 1 42 0 208 327 67 29 chr10 14350347 14350451 -131238837 - L2 LINE L2 -1839 1475 1368 292 265 29 0 chr10 14350861 14350929 -131238359 + L2 LINE L2 3200 3269 -44 1890 143 31 0 chr10 14352413 14352707 -131236581 - AluSx SINE Alu -9 303 1 1523 140 4 0 chr10 14353394 14353637 -131235651 + AluSx SINE Alu 39 282 -30 459 213 15 22 chr10 14353637 14353773 -131235515 + CT-rich Low_complexity Low_complexity 1 135 0 414 250 0 0 chr10 14353783 14353951 -131235337 + C-rich Low_complexity Low_complexity 1 168 0 1938 110 0 0 chr10 14354456 14354729 -131234559 + AluSx SINE Alu 39 311 -1 339 343 48 0 chr10 14354733 14354879 -131234409 - L2 LINE L2 -838 2476 2324 2259 90 3 6 chr10 14357016 14357328 -131231960 - AluSx SINE Alu -1 311 1 387 173 4 2 chr10 14357640 14357728 -131231560 + AluJ/FLAM SINE Alu 2 58 -244 232 216 0 108 chr10 14357728 14357830 -131231458 - L2 LINE L2 -300 2972 2882 2091 105 14 3 chr10 14358437 14358733 -131230555 + AluSx SINE Alu 1 299 -13 2327 54 3 32 chr10 14358735 14359051 -131230237 + AluY SINE Alu 1 307 -4 1442 213 47 0 chr10 14359051 14359351 -131229937 - L1M4 LINE L1 -379 5799 5486 1806 137 7 7 chr10 14359710 14360009 -131229279 + AluSx SINE Alu 1 299 -13 189 0 0 0 chr10 14360646 14360667 -131228621 + (T)n Simple_repeat Simple_repeat 1 21 0 1973 252 50 23 chr10 14360998 14361521 -131227767 - MLT1H LTR MaLR 0 549 13 428 311 64 14 chr10 14362105 14362327 -131226961 + L1ME2 LINE L1 5478 5717 -445 523 254 81 133 chr10 14362329 14362598 -131226690 - L2 LINE L2 0 3313 3070 667 200 56 22 chr10 14362598 14362778 -131226510 + MER53 DNA DNA 1 186 -3 523 254 81 133 chr10 14362778 14362914 -131226374 - L2 LINE L2 -243 3070 2929 329 278 102 16 chr10 14362948 14363135 -131226153 + L1ME2 LINE L1 5746 5948 -216 2349 72 3 0 chr10 14363365 14363671 -131225617 - AluSq SINE Alu -6 307 1 380 329 63 0 chr10 14364100 14364258 -131225030 + MIR SINE MIR 68 235 -27 192 77 0 0 chr10 14364260 14364286 -131225002 + (TTA)n Simple_repeat Simple_repeat 1 26 0 378 266 186 49 chr10 14365007 14365233 -131224055 - MIR SINE MIR 0 262 6 396 287 78 65 chr10 14365756 14365956 -131223332 + MIR SINE MIR 26 231 -31 201 74 0 0 chr10 14365956 14365983 -131223305 + (TTA)n Simple_repeat Simple_repeat 3 29 0 396 287 78 65 chr10 14365983 14366012 -131223276 + MIR SINE MIR 231 258 -4 2067 103 3 3 chr10 14366534 14366825 -131222463 - AluSx SINE Alu -2 310 20 232 332 67 14 chr10 14367138 14367361 -131221927 - L2 LINE L2 -213 3059 2825 785 172 12 37 chr10 14367661 14367824 -131221464 - AluJo/FRAM SINE Alu -19 293 135 1492 148 109 28 chr10 14367824 14368108 -131221180 - AluJo SINE Alu -5 307 1 921 250 73 82 chr10 14368108 14368532 -131220756 - L2 LINE L2 -10 3303 2884 393 251 27 153 chr10 14368553 14368687 -131220601 + MER5A DNA MER1_type 14 121 -68 2105 119 3 3 chr10 14368687 14368997 -131220291 - AluSx SINE Alu -2 310 1 393 251 27 153 chr10 14368997 14369045 -131220243 + MER5A DNA MER1_type 121 173 -16 330 45 0 0 chr10 14369054 14369098 -131220190 + (TC)n Simple_repeat Simple_repeat 1 44 0 1742 150 27 23 chr10 14369244 14369544 -131219744 + AluJo SINE Alu 6 306 -6 2049 104 7 26 chr10 14369926 14370234 -131219054 - AluSx SINE Alu -10 302 1 22 0 0 0 chr10 14370293 14370315 -131218973 + AT_rich Low_complexity Low_complexity 1 22 0 803 251 38 30 chr10 14370388 14370623 -131218665 + MIR SINE MIR 16 252 -10 2134 96 0 0 chr10 14370630 14370940 -131218348 - AluSx SINE Alu 0 310 1 853 168 6 30 chr10 14371875 14372042 -131217246 - FRAM SINE Alu -13 163 1 394 306 75 15 chr10 14372044 14372178 -131217110 + MIR SINE MIR 102 243 -19 302 273 91 27 chr10 14372182 14372292 -131216996 + MIR SINE MIR 143 259 -3 1522 145 87 11 chr10 14372378 14372654 -131216634 - AluJo SINE Alu -15 297 1 2034 121 24 0 chr10 14373167 14373464 -131215824 - AluSx SINE Alu -8 304 1 2038 108 3 3 chr10 14373599 14373895 -131215393 - AluSx SINE Alu -11 301 6 229 143 0 0 chr10 14374472 14374507 -131214781 - MER85 DNA T2_type 0 139 105 299 71 0 0 chr10 14374591 14374633 -131214655 - MER85 DNA T2_type -96 43 2 7122 60 23 0 chr10 14374856 14375936 -131213352 - L1PA8 LINE L1 0 6172 5092 2671 100 8 8 chr10 14376083 14376462 -131212826 + L1PA13 LINE L1 5765 6143 -20 1217 164 14 24 chr10 14376504 14376717 -131212571 - MIR SINE MIR -35 227 17 288 297 57 62 chr10 14376734 14376943 -131212345 - L2 LINE L2 -170 3143 2936 208 261 0 0 chr10 14376982 14377028 -131212260 - L2 LINE L2 -557 2757 2712 280 301 86 73 chr10 14377107 14377641 -131211647 - L2 LINE L2 -431 2883 2343 1959 104 42 0 chr10 14377750 14378037 -131211251 + AluSx SINE Alu 1 299 -13 217 246 0 49 chr10 14378135 14378196 -131211092 + L3b LINE CR1 1306 1363 -220 1305 154 0 0 chr10 14378305 14378506 -131210782 + AluJb SINE Alu 82 282 -30 180 0 0 0 chr10 14378509 14378529 -131210759 + (CAAA)n Simple_repeat Simple_repeat 3 22 0 181 79 0 53 chr10 14379562 14379600 -131209688 + (CGG)n Simple_repeat Simple_repeat 2 37 0 28 68 0 0 chr10 14379661 14379705 -131209583 + GC_rich Low_complexity Low_complexity 1 44 0 194 62 31 0 chr10 14379771 14379803 -131209485 + (CGGGGG)n Simple_repeat Simple_repeat 5 37 0 1923 92 61 10 chr10 14383862 14384155 -131205133 - AluSc SINE Alu -1 308 1 976 191 0 6 chr10 14384800 14384983 -131204305 + FRAM SINE Alu 1 174 -2 201 74 0 0 chr10 14385624 14385651 -131203637 + (GA)n Simple_repeat Simple_repeat 2 28 0 346 226 48 55 chr10 14386120 14386254 -131203034 + MIR SINE MIR 1 139 -69 782 145 0 0 chr10 14386325 14386442 -131202846 - FLAM_C SINE Alu -18 125 9 891 80 0 0 chr10 14387311 14387449 -131201839 + (TG)n Simple_repeat Simple_repeat 2 139 0 2095 121 0 7 chr10 14388038 14388344 -131200944 - AluSx SINE Alu -7 305 2 2045 125 7 0 chr10 14388449 14388754 -131200534 + AluJb SINE Alu 1 307 -5 441 0 0 0 chr10 14389512 14389561 -131199727 + (CA)n Simple_repeat Simple_repeat 1 49 0 180 77 0 0 chr10 14390105 14390131 -131199157 + (TC)n Simple_repeat Simple_repeat 2 27 0 1608 155 4 22 chr10 14390138 14390416 -131198872 - AluJo SINE Alu -39 273 1 857 288 168 37 chr10 14390524 14391514 -131197774 - L2 LINE L2 0 3313 2193 736 180 8 0 chr10 14391607 14391735 -131197553 + FLAM_C SINE Alu 2 130 -3 624 148 13 26 chr10 14391735 14391890 -131197398 + GA-rich Low_complexity Low_complexity 1 153 0 1061 171 0 75 chr10 14392012 14392264 -131197024 - AluJo SINE Alu -6 306 74 806 109 0 8 chr10 14392284 14392403 -131196885 - AluJo SINE Alu -162 150 33 455 250 0 0 chr10 14392413 14392529 -131196759 - L1MA10 LINE L1 -4 6330 6215 372 164 0 0 chr10 14392697 14392764 -131196524 + CT-rich Low_complexity Low_complexity 2 68 0 2195 106 0 0 chr10 14392778 14393081 -131196207 - AluSx SINE Alu -9 303 1 189 0 0 0 chr10 14393308 14393329 -131195959 + (T)n Simple_repeat Simple_repeat 1 21 0 37 62 0 0 chr10 14394697 14394762 -131194526 + AT_rich Low_complexity Low_complexity 1 65 0 518 301 137 5 chr10 14395378 14395597 -131193691 - L3 LINE CR1 -25 1552 1305 441 243 28 0 chr10 14395664 14395771 -131193517 - MER94 DNA DNA -24 110 1 462 328 11 17 chr10 14395832 14396006 -131193282 - L3 LINE CR1 -407 1170 998 259 247 14 14 chr10 14396068 14396141 -131193147 - L3 LINE CR1 -852 725 653 307 267 43 9 chr10 14396758 14396874 -131192414 - L1ME LINE L1 -411 5710 5591 2136 115 3 0 chr10 14397283 14397587 -131191701 - AluSx SINE Alu -7 305 1 1544 167 21 0 chr10 14397711 14397992 -131191296 + AluSq SINE Alu 6 292 -21 1610 152 45 0 chr10 14398340 14398640 -131190648 - AluSq SINE Alu 0 314 3 186 143 0 0 chr10 14398750 14398785 -131190503 + (CAAA)n Simple_repeat Simple_repeat 1 35 0 514 270 23 46 chr10 14399477 14399651 -131189637 - MIR SINE MIR -79 183 14 180 0 0 0 chr10 14400846 14400866 -131188422 + (GGGGA)n Simple_repeat Simple_repeat 3 22 0 187 268 18 104 chr10 14401054 14401218 -131188070 - L2 LINE L2 -328 2985 2836 192 143 0 125 chr10 14402373 14402429 -131186859 - MER5A DNA MER1_type -35 154 106 1652 155 30 17 chr10 14402729 14403025 -131186263 - AluJb SINE Alu -12 300 1 49 18 0 0 chr10 14403285 14403341 -131185947 + AT_rich Low_complexity Low_complexity 1 56 0 851 145 0 0 chr10 14403448 14403572 -131185716 - FLAM_A SINE Alu -8 125 2 528 80 90 17 chr10 14403591 14403884 -131185404 + (TTATA)n Simple_repeat Simple_repeat 1 314 0 197 90 64 39 chr10 14403906 14403984 -131185304 + (TTATA)n Simple_repeat Simple_repeat 5 84 0 1730 178 0 6 chr10 14403985 14404299 -131184989 + AluJb SINE Alu 1 312 0 615 235 63 26 chr10 14404364 14404572 -131184716 + L1MA9 LINE L1 6024 6236 -63 1805 114 44 0 chr10 14404576 14404847 -131184441 - AluSx SINE Alu -8 304 22 1470 158 64 8 chr10 14405810 14406076 -131183212 + AluJb SINE Alu 1 368 0 596 46 23 0 chr10 14406076 14406163 -131183125 + (TAAAA)n Simple_repeat Simple_repeat 5 180 0 449 329 19 6 chr10 14406245 14406403 -131182885 - MIR SINE MIR -2 260 101 817 180 0 18 chr10 14406403 14406570 -131182718 + AluJb SINE Alu 136 299 -13 2130 113 0 3 chr10 14406669 14406979 -131182309 + AluSx SINE Alu 1 309 -3 243 88 0 0 chr10 14407173 14407207 -131182081 + (T)n Simple_repeat Simple_repeat 1 34 0 2105 114 3 0 chr10 14407250 14407557 -131181731 + AluSq SINE Alu 1 308 -5 1931 134 0 26 chr10 14407933 14408246 -131181042 - AluSx SINE Alu -7 305 1 195 146 0 0 chr10 14408581 14408622 -131180666 + (A)n Simple_repeat Simple_repeat 1 41 0 407 140 0 0 chr10 14410311 14410368 -131178920 - MLT1B LTR MaLR -332 58 2 836 165 0 0 chr10 14410624 14410757 -131178531 + AluSg/x SINE Alu 158 290 -22 924 238 40 8 chr10 14411089 14411337 -131177951 - MER63 DNA MER1_type -1 1060 805 444 101 72 0 chr10 14411488 14411557 -131177731 - MER63 DNA MER1_type -362 700 1 226 353 25 34 chr10 14411563 14411682 -131177606 - MIR SINE MIR -59 149 32 712 221 36 72 chr10 14411980 14412147 -131177141 + L2 LINE L2 3126 3287 -26 2300 66 3 23 chr10 14412147 14412449 -131176839 - AluSp SINE Alu -17 296 1 712 221 36 72 chr10 14412449 14412476 -131176812 + L2 LINE L2 3287 3313 0 378 298 140 11 chr10 14412888 14413066 -131176222 - L3b LINE CR1 -87 1496 1296 2058 109 0 3 chr10 14413078 14413393 -131175895 - AluSp SINE Alu 0 314 1 263 294 74 74 chr10 14414020 14414441 -131174847 - L1ME4a LINE L1 -59 6062 5642 475 310 77 56 chr10 14414877 14415200 -131174088 + L2 LINE L2 2943 3272 0 396 0 0 0 chr10 14415283 14415327 -131173961 + (CA)n Simple_repeat Simple_repeat 2 45 0 222 274 10 20 chr10 14415336 14415438 -131173850 + (CATATA)n Simple_repeat Simple_repeat 4 104 0 435 19 0 0 chr10 14415479 14415531 -131173757 + (TAGA)n Simple_repeat Simple_repeat 4 55 0 183 100 0 0 chr10 14415552 14415582 -131173706 + (TA)n Simple_repeat Simple_repeat 2 31 0 2006 105 0 57 chr10 14416813 14417128 -131172160 + AluSx SINE Alu 1 297 -15 434 304 89 37 chr10 14417323 14417514 -131171774 + L3b LINE CR1 1310 1510 -73 1975 125 13 7 chr10 14417691 14417995 -131171293 - AluSx SINE Alu -6 306 1 1268 181 38 48 chr10 14418000 14418293 -131170995 - AluJo SINE Alu -22 290 1 672 133 68 236 chr10 14418713 14419024 -131170264 + MER33 DNA MER1_type 14 255 -2330 1909 107 70 0 chr10 14419024 14419295 -131169993 + AluSc SINE Alu 3 292 -17 672 133 68 236 chr10 14419295 14419352 -131169936 + MER33 DNA MER1_type 255 320 -4 3191 138 47 21 chr10 14419363 14419625 -131169663 - MER1A DNA MER1_type -2173 527 273 2224 110 0 0 chr10 14419625 14419925 -131169363 - AluSc SINE Alu -9 300 1 3191 138 47 21 chr10 14419925 14420176 -131169112 - MER1A DNA MER1_type -2427 273 1 2071 126 3 0 chr10 14420302 14420612 -131168676 - AluSx SINE Alu -1 311 1 443 313 159 11 chr10 14420629 14420805 -131168483 - MIR SINE MIR -56 206 5 716 120 0 68 chr10 14421322 14421439 -131167849 - AluSg/x SINE Alu -16 296 188 1471 119 5 0 chr10 14421439 14421657 -131167631 - AluSq SINE Alu -94 219 1 204 40 0 0 chr10 14422196 14422221 -131167067 + (TG)n Simple_repeat Simple_repeat 1 25 0 219 250 78 63 chr10 14422825 14422961 -131166327 + MIR SINE MIR 54 191 -62 21 0 0 0 chr10 14423071 14423092 -131166196 + AT_rich Low_complexity Low_complexity 1 21 0 339 343 48 0 chr10 14423094 14423240 -131166048 - L2 LINE L2 -838 2476 2324 2259 90 3 6 chr10 14425376 14425688 -131163600 - AluSx SINE Alu -1 311 1 387 173 4 2 chr10 14426000 14426088 -131163200 + AluJ/FLAM SINE Alu 2 58 -244 232 216 0 108 chr10 14426088 14426190 -131163098 - L2 LINE L2 -300 2972 2882 2091 105 14 3 chr10 14426797 14427093 -131162195 + AluSx SINE Alu 1 299 -13 2128 85 0 29 chr10 14427095 14427402 -131161886 + AluY SINE Alu 1 298 -13 186 294 0 20 chr10 14427475 14427526 -131161762 + MIR SINE MIR 23 72 -136 310 305 30 41 chr10 14427551 14427748 -131161540 + L2 LINE L2 2910 3104 -168 1817 145 3 3 chr10 14427829 14428125 -131161163 - AluSx SINE Alu -15 297 2 245 321 71 57 chr10 14428325 14428465 -131160823 + L2 LINE L2 2923 3064 -208 2221 97 0 13 chr10 14428566 14428876 -131160412 + AluSg SINE Alu 1 306 -4 228 243 0 54 chr10 14428920 14428994 -131160294 + L2 LINE L2 3244 3313 0 2016 118 0 0 chr10 14429635 14429915 -131159373 + AluSc SINE Alu 1 280 -29 1617 153 0 71 chr10 14431134 14431442 -131157846 - AluJo SINE Alu -26 286 1 1808 120 0 8 chr10 14431567 14431834 -131157454 + AluSx SINE Alu 34 298 -14 1593 180 3 38 chr10 14431990 14432307 -131156981 - AluJo SINE Alu -6 306 1 2060 108 0 49 chr10 14433202 14433527 -131155761 - AluSc SINE Alu 0 309 1 881 180 12 18 chr10 14433809 14433976 -131155312 - FRAM SINE Alu 0 166 1 1568 151 10 49 chr10 14434366 14434525 -131154763 - AluJo SINE Alu -20 292 149 1815 148 7 0 chr10 14434525 14434815 -131154473 - AluSx SINE Alu -9 303 12 1568 151 10 49 chr10 14434815 14434959 -131154329 - AluJo SINE Alu -163 149 1 653 219 123 0 chr10 14435302 14435457 -131153831 + MER5B DNA MER1_type 1 174 -4 2155 102 0 0 chr10 14435481 14435776 -131153512 - AluY SINE Alu -16 295 1 877 184 66 5 chr10 14435958 14436170 -131153118 + L1MD3 LINE L1 7756 7980 -15 2112 130 0 0 chr10 14436467 14436768 -131152520 - AluSx SINE Alu -11 301 1 279 79 0 0 chr10 14437640 14437678 -131151610 + (CACG)n Simple_repeat Simple_repeat 2 39 0 278 253 379 0 chr10 14438431 14438526 -131150762 - MER94 DNA DNA -1 133 3 1769 132 30 20 chr10 14439806 14440102 -131149186 - AluSx SINE Alu -13 299 1 1022 94 0 0 chr10 14440118 14440256 -131149032 + AluSg/x SINE Alu 160 297 -15 360 185 12 12 chr10 14440555 14440636 -131148652 - AluSg/x SINE Alu -3 299 219 372 175 0 0 chr10 14440819 14440882 -131148406 + Alu SINE Alu 235 297 -3 2224 88 7 0 chr10 14441178 14441472 -131147816 - AluSc SINE Alu -13 296 1 1072 232 120 4 chr10 14441505 14441755 -131147533 + MLT1A2 LTR MaLR 1 279 -95 260 300 31 46 chr10 14441763 14441893 -131147395 - L2 LINE L2 -5 3308 3181 686 228 65 122 chr10 14442411 14442456 -131146832 - MARNA DNA Mariner -17 569 523 1991 110 21 0 chr10 14442456 14442746 -131146542 + AluSx SINE Alu 1 296 -16 686 228 65 122 chr10 14442746 14442760 -131146528 - MARNA DNA Mariner -63 523 510 1924 148 61 111 chr10 14442760 14443200 -131146088 - MER47B DNA MER2_type 0 418 1 686 228 65 122 chr10 14443200 14443508 -131145780 - MARNA DNA Mariner -76 510 222 1766 142 56 23 chr10 14443602 14443904 -131145384 + AluJo SINE Alu 1 312 0 350 173 0 12 chr10 14443911 14443992 -131145296 + GA-rich Low_complexity Low_complexity 1 80 0 184 278 278 9 chr10 14444370 14444485 -131144803 - MIR SINE MIR -60 202 57 1817 186 62 5 chr10 14444485 14444873 -131144415 + L1MB4 LINE L1 5771 6180 0 633 209 171 37 chr10 14445602 14445789 -131143499 + MLT1I LTR MaLR 198 409 0 2415 101 55 0 chr10 14446765 14447110 -131142178 + THE1B LTR MaLR 1 364 0 364 231 77 0 chr10 14447335 14447413 -131141875 + MIR3 SINE MIR 74 157 -51 1346 182 17 34 chr10 14447467 14447763 -131141525 - AluJo SINE Alu -21 291 1 676 222 7 46 chr10 14447919 14448072 -131141216 + MIR SINE MIR 82 228 -34 2092 99 0 7 chr10 14448137 14448449 -131140839 + AluSx SINE Alu 1 310 0 185 292 42 42 chr10 14448653 14448749 -131140539 + L2 LINE L2 2995 3090 -223 499 214 156 74 chr10 14448846 14448993 -131140295 + MLT1D LTR MaLR 1 135 -332 1612 125 0 74 chr10 14448993 14449290 -131139998 - AluSx SINE Alu -10 302 28 499 214 156 74 chr10 14449290 14449543 -131139745 + MLT1D LTR MaLR 135 467 0 346 273 55 38 chr10 14450881 14451042 -131138246 - MIR SINE MIR -55 207 47 286 238 0 24 chr10 14451326 14451410 -131137878 - L1MC4 LINE L1 -1325 6717 6636 * 936 196 29 0 chr10 14451397 14451601 -131137687 - L1MA8 LINE L1 -27 6264 6055 236 375 48 10 chr10 14451704 14451808 -131137480 + L2 LINE L2 3150 3257 -15 603 214 101 59 chr10 14453406 14453489 -131135799 - MER2 DNA MER2_type 0 345 267 1814 134 9 53 chr10 14453489 14453809 -131135479 + AluSg SINE Alu 1 306 -4 603 214 101 59 chr10 14453809 14453904 -131135384 - MER2 DNA MER2_type -78 267 152 2146 111 0 7 chr10 14453904 14454210 -131135078 + AluSx SINE Alu 1 304 -8 603 214 101 59 chr10 14454210 14454268 -131135020 - MER2 DNA MER2_type -193 152 98 2910 174 26 26 chr10 14454293 14454622 -131134666 - MER44D DNA MER2_type -1892 595 209 1920 117 101 38 chr10 14454622 14454938 -131134350 + MER1B DNA MER1_type 2 337 0 2910 174 26 26 chr10 14454938 14455148 -131134140 - MER44D DNA MER2_type -2277 210 1 421 238 0 0 chr10 14455149 14455233 -131134055 - MER2 DNA MER2_type -261 84 1 230 340 124 0 chr10 14455366 14455463 -131133825 + MIR SINE MIR 148 256 -6 3782 130 51 19 chr10 14457460 14457813 -131131475 - L1PB4 LINE L1 0 6156 5773 2277 97 3 0 chr10 14457813 14458124 -131131164 - AluSp SINE Alu -1 312 1 3782 130 51 19 chr10 14458124 14458401 -131130887 - L1PB4 LINE L1 -383 5773 5506 1545 141 130 11 chr10 14458535 14458804 -131130484 + AluJo SINE Alu 1 301 -1 2037 130 0 0 chr10 14460082 14460382 -131128906 - AluSx SINE Alu -12 300 1 854 211 0 6 chr10 14460590 14460761 -131128527 + FRAM SINE Alu 1 166 -10 247 380 70 22 chr10 14460773 14461002 -131128286 + MIR SINE MIR 17 256 -6 407 237 44 0 chr10 14461720 14461834 -131127454 - MER5B DNA MER1_type -1 177 59 614 191 0 0 chr10 14461840 14461945 -131127343 - AluJo SINE Alu -6 306 202 1109 145 0 0 chr10 14462032 14462198 -131127090 - AluJo SINE Alu -112 200 35 197 270 96 70 chr10 14462342 14462430 -131126858 - L2 LINE L2 -8 3264 3171 2265 103 58 11 chr10 14462430 14462778 -131126510 - THE1B LTR MaLR 0 364 1 197 270 96 70 chr10 14462778 14462804 -131126484 - L2 LINE L2 -101 3171 3147 402 262 206 7 chr10 14462871 14463012 -131126276 + MIR SINE MIR 69 237 -25 351 273 263 25 chr10 14462989 14463187 -131126101 - MIR SINE MIR 0 262 18 * 2014 133 0 19 chr10 14463268 14463584 -131125704 + AluSx SINE Alu 1 310 -2 200 59 29 0 chr10 14463601 14463635 -131125653 + (CAAAA)n Simple_repeat Simple_repeat 4 38 0 550 276 74 41 chr10 14464415 14464658 -131124630 + MIR SINE MIR 8 258 -4 3204 116 49 18 chr10 14464700 14465209 -131124079 + MER1A DNA MER1_type 3 527 0 266 196 0 0 chr10 14465222 14465273 -131124015 - L2 LINE L2 0 3313 3263 2069 116 0 0 chr10 14465298 14465590 -131123698 - AluSx SINE Alu -20 292 1 204 253 88 66 chr10 14465777 14465868 -131123420 - MIR SINE MIR -77 131 39 2480 56 0 0 chr10 14466045 14466349 -131122939 - AluY SINE Alu -7 304 1 1494 165 10 28 chr10 14467395 14467686 -131121602 - AluJo SINE Alu -26 286 1 2126 107 0 0 chr10 14467793 14468082 -131121206 - AluSx SINE Alu -20 292 4 1678 172 3 31 chr10 14468279 14468598 -131120690 - AluJo SINE Alu -2 310 1 1764 174 25 29 chr10 14469383 14469773 -131119515 + MLT1B LTR MaLR 1 591 -2 2142 110 3 0 chr10 14469811 14470110 -131119178 + AluSq SINE Alu 13 312 -1 1741 150 4 0 chr10 14470121 14470394 -131118894 + AluJb SINE Alu 3 276 -36 1482 284 44 70 chr10 14470569 14471273 -131118015 + MER21B LTR ERV1 24 709 -154 374 284 74 31 chr10 14471761 14471923 -131117365 - MIR SINE MIR -74 188 20 624 135 0 0 chr10 14472050 14472146 -131117142 + FRAM SINE Alu 77 172 -4 544 219 57 0 chr10 14472489 14472612 -131116676 - MER5A DNA MER1_type -59 130 1 298 256 48 48 chr10 14472725 14472789 -131116499 + MLT1L LTR MaLR 250 316 -299 2020 123 0 3 chr10 14472789 14473090 -131116198 - AluSx SINE Alu -12 300 1 298 256 48 48 chr10 14473090 14473150 -131116138 + MLT1L LTR MaLR 315 374 -241 323 237 9 0 chr10 14473373 14473487 -131115801 + (TG)n Simple_repeat Simple_repeat 1 115 0 239 274 137 29 chr10 14474830 14474932 -131114356 - MIR SINE MIR -102 160 48 511 241 4 171 chr10 14474950 14475207 -131114081 - MIR SINE MIR -32 230 17 955 226 28 14 chr10 14475226 14475438 -131113850 + MIR SINE MIR 31 245 -17 462 45 152 0 chr10 14475521 14475587 -131113701 + MADE1 DNA Mariner 1 76 -4 357 131 0 0 chr10 14476783 14476844 -131112444 + (TCCC)n Simple_repeat Simple_repeat 1 61 0 287 254 0 0 chr10 14477620 14477687 -131111601 - MER116 DNA Mariner -5 75 9 375 60 0 0 chr10 14477881 14477931 -131111357 + (TG)n Simple_repeat Simple_repeat 2 51 0 2169 84 10 0 chr10 14478774 14479070 -131110218 - AluSp SINE Alu -14 299 1 1591 92 5 0 chr10 14479179 14479397 -131109891 + AluSq SINE Alu 1 219 -94 716 120 0 68 chr10 14479397 14479514 -131109774 + AluSg/x SINE Alu 186 294 -16 443 313 159 11 chr10 14480031 14480207 -131109081 + MIR SINE MIR 5 206 -56 2071 126 3 0 chr10 14480224 14480534 -131108754 + AluSx SINE Alu 1 311 -1 3191 138 47 21 chr10 14480659 14480910 -131108378 + MER1A DNA MER1_type 1 244 -2456 2224 110 0 0 chr10 14480910 14481210 -131108078 + AluSc SINE Alu 1 300 -9 3191 138 47 21 chr10 14481210 14481472 -131107816 + MER1A DNA MER1_type 244 527 0 546 173 84 128 chr10 14481483 14481540 -131107748 - Charlie5 DNA MER1_type -4 2581 2523 1909 107 70 0 chr10 14481540 14481811 -131107477 - AluSc SINE Alu -17 292 3 546 173 84 128 chr10 14481811 14482002 -131107286 - Charlie5 DNA MER1_type -62 2523 2344 239 372 0 23 chr10 14482137 14482266 -131107022 + CT-rich Low_complexity Low_complexity 2 127 0 876 158 0 0 chr10 14482375 14482508 -131106780 - AluSq/x SINE Alu -180 133 1 185 315 0 81 chr10 14482598 14482709 -131106579 - L2 LINE L2 -185 3087 2986 342 315 74 19 chr10 14482863 14483025 -131106263 + MIR3 SINE MIR 30 200 -8 1385 187 0 8 chr10 14483065 14483322 -131105966 + AluJo SINE Alu 37 291 -21 815 247 58 25 chr10 14484175 14484418 -131104870 - MIR SINE MIR -10 252 2 1512 186 0 4 chr10 14485873 14486147 -131103141 + AluJo SINE Alu 32 304 -8 2089 106 13 10 chr10 14486891 14487192 -131102096 - AluSx SINE Alu -10 302 1 23 33 0 0 chr10 14488249 14488279 -131101009 + AT_rich Low_complexity Low_complexity 1 30 0 2246 100 0 0 chr10 14488280 14488591 -131100697 + AluY SINE Alu 1 311 0 2113 73 0 4 chr10 14489077 14489352 -131099936 - AluSg SINE Alu -8 302 29 857 292 132 36 chr10 14489353 14489961 -131099327 - L2 LINE L2 -2 3311 2654 332 311 20 66 chr10 14490412 14490563 -131098725 + L3 LINE CR1 843 986 -591 231 296 67 21 chr10 14491668 14491786 -131097502 + MIR3 SINE MIR 86 160 -48 1792 182 24 25 chr10 14491906 14492277 -131097011 - MLT1A2 LTR MaLR -3 546 1 308 257 108 0 chr10 14492336 14492410 -131096878 + MIR SINE MIR 1 82 -180 1010 125 6 25 chr10 14492433 14492593 -131096695 + MLT1A1 LTR MaLR 1 157 -208 1657 180 14 0 chr10 14492594 14492888 -131096400 + AluJb SINE Alu 3 300 -12 390 129 0 0 chr10 14492888 14492950 -131096338 + (GA)n Simple_repeat Simple_repeat 1 62 0 979 174 61 33 chr10 14492955 14493168 -131096120 + MLT1A1 LTR MaLR 156 374 0 286 295 0 0 chr10 14493187 14493265 -131096023 + MIR SINE MIR 180 257 -5 1870 134 3 0 chr10 14494176 14494497 -131094791 - AluSx SINE Alu 0 322 1 254 217 12 12 chr10 14494561 14494644 -131094644 + (TTTAA)n Simple_repeat Simple_repeat 3 85 0 2199 99 3 0 chr10 14495325 14495619 -131093669 + AluSx SINE Alu 1 295 -17 228 67 0 0 chr10 14495701 14495731 -131093557 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 648 246 119 25 chr10 14495857 14496093 -131093195 - L2 LINE L2 0 3313 3056 247 346 54 15 chr10 14496236 14496366 -131092922 - MIR3 SINE MIR -38 170 36 2008 128 0 23 chr10 14496563 14496868 -131092420 + AluSx SINE Alu 1 298 -14 463 264 161 1 chr10 14497489 14497675 -131091613 + MIR SINE MIR 37 250 -12 511 323 62 60 chr10 14498250 14498466 -131090822 - L3 LINE CR1 -12 1565 1351 2441 51 7 0 chr10 14498466 14498762 -131090526 - AluY SINE Alu -13 298 1 511 323 62 60 chr10 14498762 14499043 -131090245 - L3 LINE CR1 -226 1351 1067 1099 164 14 5 chr10 14499128 14499336 -131089952 - AluJo SINE Alu -19 293 84 246 269 295 29 chr10 14499351 14499663 -131089625 - L3 LINE CR1 -590 987 593 331 318 210 0 chr10 14499823 14499999 -131089289 - L3 LINE CR1 -998 579 367 394 235 25 105 chr10 14500231 14500393 -131088895 + L2 LINE L2 3107 3255 -58 269 174 0 0 chr10 14500495 14500541 -131088747 + L2 LINE L2 3226 3271 -1 1712 187 30 16 chr10 14500699 14501063 -131088225 - L1MB8 LINE L1 -13 6165 5797 825 166 7 0 chr10 14501063 14501208 -131088080 - AluSp/q SINE Alu -14 299 154 698 208 86 63 chr10 14501958 14502159 -131087129 + MIR SINE MIR 6 202 -60 10694 92 26 4 chr10 14502664 14504108 -131085180 + Charlie3 DNA MER1_type 543 2017 -693 367 124 38 29 chr10 14504226 14504331 -131084957 + GA-rich Low_complexity Low_complexity 1 106 0 603 116 0 0 chr10 14504852 14504947 -131084341 - L1MA4A LINE L1 -4 6299 6205 2183 105 3 0 chr10 14505279 14505584 -131083704 - AluSp SINE Alu -5 308 3 2027 123 0 16 chr10 14507199 14507509 -131081779 - AluSx SINE Alu -7 305 1 304 249 185 44 chr10 14507677 14507882 -131081406 + LTR33A LTR ERVL 112 345 -178 274 319 75 25 chr10 14509135 14509295 -131079993 - MIR SINE MIR -36 226 59 2430 78 0 0 chr10 14510104 14510398 -131078890 + AluY SINE Alu 1 294 -17 280 252 7 147 chr10 14511081 14511224 -131078064 + MIR SINE MIR 66 188 -74 312 275 79 106 chr10 14512292 14512547 -131076741 - MIR SINE MIR -15 247 2 283 291 181 14 chr10 14512820 14513030 -131076258 - MIR SINE MIR -12 250 6 250 236 14 42 chr10 14514378 14514450 -131074838 - MIR3 SINE MIR -30 178 109 248 290 20 30 chr10 14515499 14515599 -131073689 - MIR SINE MIR -138 124 26 2211 93 3 7 chr10 14515712 14516001 -131073287 + AluSc SINE Alu 1 288 -21 293 278 14 0 chr10 14516615 14516687 -131072601 + L2 LINE L2 3191 3263 -9 206 301 16 73 chr10 14516716 14516839 -131072449 - MIR SINE MIR -135 127 12 211 331 33 16 chr10 14517063 14517184 -131072104 - MIR SINE MIR -136 126 4 2301 97 0 10 chr10 14517893 14518192 -131071096 - AluSx SINE Alu -16 296 1 2457 227 5 34 chr10 14518219 14518779 -131070509 + MER74A LTR ERVL 1 544 -14 222 302 108 14 chr10 14518982 14519121 -131070167 + MIR SINE MIR 56 207 -55 256 295 155 0 chr10 14520574 14520703 -131068585 + MIR3 SINE MIR 58 206 -2 337 306 0 19 chr10 14520737 14520845 -131068443 + MER81 DNA DNA 8 113 -1 27 73 0 0 chr10 14520894 14520949 -131068339 + AT_rich Low_complexity Low_complexity 1 55 0 310 203 61 0 chr10 14520968 14521131 -131068157 + (TA)n Simple_repeat Simple_repeat 1 173 0 180 297 47 0 chr10 14521172 14521236 -131068052 + MIR SINE MIR 196 262 0 1436 216 11 0 chr10 14521924 14522206 -131067082 + AluJb SINE Alu 18 302 -10 1822 132 0 78 chr10 14522220 14522554 -131066734 + AluSx SINE Alu 1 308 -4 264 158 0 0 chr10 14523361 14523418 -131065870 + A-rich Low_complexity Low_complexity 1 57 0 787 169 23 0 chr10 14524586 14524716 -131064572 - FLAM_A SINE Alu 0 133 1 2227 90 0 4 chr10 14525166 14525476 -131063812 - AluSc SINE Alu 0 309 1 312 298 58 0 chr10 14526244 14526348 -131062940 + L2 LINE L2 3155 3264 -8 189 296 0 0 chr10 14528600 14528698 -131060590 + (TG)n Simple_repeat Simple_repeat 2 99 0 232 269 0 0 chr10 14528740 14528792 -131060496 + (TATG)n Simple_repeat Simple_repeat 1 52 0 1881 204 34 0 chr10 14529799 14530152 -131059136 + MLT1A1 LTR MaLR 1 365 0 2226 110 0 22 chr10 14530596 14530915 -131058373 + AluSx SINE Alu 1 312 0 381 315 109 38 chr10 14531129 14531367 -131057921 - MIR SINE MIR 0 262 8 335 114 107 0 chr10 14531606 14531913 -131057375 + (TA)n Simple_repeat Simple_repeat 1 339 0 201 339 57 24 chr10 14531936 14532060 -131057228 + L2 LINE L2 2600 2727 -587 2470 73 0 16 chr10 14532137 14532451 -131056837 - AluY SINE Alu -2 309 1 372 336 14 21 chr10 14532593 14532733 -131056555 + MIR SINE MIR 1 139 -123 1072 235 13 13 chr10 14533185 14533423 -131055865 + MER8 DNA MER2_type 2 239 0 582 171 0 27 chr10 14533529 14533640 -131055648 - FLAM_A SINE Alu -5 137 30 504 0 0 0 chr10 14535470 14535526 -131053762 + (CACAA)n Simple_repeat Simple_repeat 4 59 0 1519 143 0 0 chr10 14535988 14536205 -131053083 + AluSx SINE Alu 1 217 -95 916 277 92 60 chr10 14536905 14537392 -131051896 + MLT1J LTR MaLR 7 509 -2 261 299 0 0 chr10 14538444 14538521 -131050767 + MER116 DNA Mariner 3 79 -1 861 170 0 0 chr10 14539027 14539168 -131050120 + FLAM_C SINE Alu 1 141 -2 1470 221 215 67 chr10 14539274 14540451 -131048837 - L1MC5 LINE L1 -226 7735 6379 4101 107 19 0 chr10 14540534 14541106 -131048182 + L1PA16 LINE L1 5575 6157 -9 1694 279 59 28 chr10 14541331 14541977 -131047311 - L1MC4a LINE L1 -1780 6028 5363 2157 100 3 44 chr10 14543433 14543753 -131045535 + AluSx SINE Alu 1 307 -5 864 131 23 0 chr10 14543761 14543891 -131045397 + AluJb SINE Alu 172 304 -8 315 0 0 0 chr10 14544375 14544410 -131044878 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 886 167 19 0 chr10 14544565 14544721 -131044567 - FRAM SINE Alu -2 174 16 1417 193 49 10 chr10 14544727 14545033 -131044255 - L1MB2 LINE L1 -2 6169 5852 210 71 0 0 chr10 14545285 14545313 -131043975 + (A)n Simple_repeat Simple_repeat 1 28 0 1216 253 0 20 chr10 14545852 14546156 -131043132 - AluSx SINE Alu -2 300 3 272 250 20 30 chr10 14548273 14548373 -131040915 - MIR3 SINE MIR -28 180 82 409 170 0 47 chr10 14548467 14548573 -131040715 + L1M LINE L1 5291 5391 -789 2124 128 0 0 chr10 14549388 14549685 -131039603 - AluSx SINE Alu -15 297 1 2509 161 9 36 chr10 14550055 14550501 -131038787 + Tigger2a DNA MER2_type 1 434 0 192 152 0 0 chr10 14550627 14550660 -131038628 + (TG)n Simple_repeat Simple_repeat 1 33 0 180 176 0 0 chr10 14550671 14550705 -131038583 + CT-rich Low_complexity Low_complexity 1 34 0 415 241 46 0 chr10 14552020 14552128 -131037160 - MER33 DNA MER1_type -211 113 1 2226 157 78 2 chr10 14552358 14552754 -131036534 + MSTB LTR MaLR 1 426 0 596 290 15 25 chr10 14553801 14554001 -131035287 + LTR16B LTR ERVL 5 202 -262 267 263 40 13 chr10 14553983 14554059 -131035229 + LTR16B LTR ERVL 385 462 -2 * 264 229 16 0 chr10 14554107 14554168 -131035120 + L2 LINE L2 3250 3311 -2 193 293 17 0 chr10 14554576 14554634 -131034654 - L2 LINE L2 -1 3312 3254 300 197 28 14 chr10 14555014 14555085 -131034203 + MER5A DNA MER1_type 91 162 -27 231 247 56 135 chr10 14555345 14555379 -131033909 + LTR67 LTR ERVL 387 422 -135 2444 126 22 0 chr10 14555379 14555735 -131033553 - THE1B LTR MaLR 0 364 1 231 247 56 135 chr10 14555735 14555878 -131033410 + LTR67 LTR ERVL 422 550 -7 210 333 95 48 chr10 14557060 14557249 -131032039 + L2 LINE L2 2894 3091 -181 201 195 24 0 chr10 14557310 14557351 -131031937 + L2 LINE L2 3231 3272 0 309 151 288 0 chr10 14557451 14557524 -131031764 + MLT1J1 LTR MaLR 1 94 -352 332 262 8 74 chr10 14557569 14557691 -131031597 + MLT1J2 LTR MaLR 337 450 0 548 282 11 40 chr10 14557895 14557945 -131031343 - MER5A DNA MER1_type -14 175 125 2184 137 0 0 chr10 14557945 14558251 -131031037 + AluSx SINE Alu 1 306 -6 548 282 11 40 chr10 14558251 14558374 -131030914 - MER5A DNA MER1_type -64 125 7 356 301 80 6 chr10 14558464 14558627 -131030661 - MER5A DNA MER1_type -14 175 1 467 281 65 55 chr10 14558634 14558851 -131030437 + MIR SINE MIR 16 234 -28 432 280 53 26 chr10 14558889 14559075 -131030213 + MIR SINE MIR 19 208 -54 1482 111 13 25 chr10 14559207 14559245 -131030043 - L1MA5A LINE L1 -5 6292 6255 2706 120 24 19 chr10 14559245 14559671 -131029617 - MSTA LTR MaLR 0 428 1 1482 111 13 25 chr10 14559671 14559867 -131029421 - L1MA5A LINE L1 -42 6255 6061 339 169 67 22 chr10 14559867 14559956 -131029332 + L1MC5 LINE L1 7833 7925 -36 181 73 24 24 chr10 14559973 14560014 -131029274 + (CAAAA)n Simple_repeat Simple_repeat 1 41 0 232 316 0 13 chr10 14561045 14561121 -131028167 + MIR SINE MIR 37 111 -97 368 253 77 71 chr10 14561123 14561253 -131028035 - MIR SINE MIR -33 229 96 2235 110 0 0 chr10 14561253 14561580 -131027708 + AluSx SINE Alu 1 312 0 368 253 77 71 chr10 14561580 14561631 -131027657 - MIR SINE MIR -166 96 47 276 186 0 0 chr10 14562573 14562632 -131026656 + (CA)n Simple_repeat Simple_repeat 1 59 0 375 23 0 0 chr10 14562719 14562763 -131026525 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 2240 107 0 3 chr10 14563029 14563328 -131025960 - AluSc SINE Alu -11 298 1 322 310 11 0 chr10 14563818 14563905 -131025383 - L2 LINE L2 -51 3221 3134 429 296 18 12 chr10 14564078 14564247 -131025041 + MLT1L LTR MaLR 410 579 -36 298 167 19 0 chr10 14564421 14564475 -131024813 + MIR SINE MIR 110 164 -98 1810 186 0 6 chr10 14564770 14565262 -131024026 - AluJb SINE Alu 0 312 2 333 0 0 0 chr10 14566231 14566268 -131023020 + (TA)n Simple_repeat Simple_repeat 2 38 0 30 27 0 0 chr10 14567082 14567119 -131022169 + AT_rich Low_complexity Low_complexity 1 37 0 1504 165 57 25 chr10 14567131 14567410 -131021878 - AluJo SINE Alu -24 288 1 1979 124 31 7 chr10 14568872 14569163 -131020125 + AluSx SINE Alu 1 298 -14 930 204 3 0 chr10 14571108 14571404 -131017884 + (TGGA)n Simple_repeat Simple_repeat 1 297 0 746 202 6 0 chr10 14571420 14571598 -131017690 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 3021 107 9 5 chr10 14572021 14572453 -131016835 + MER57B LTR ERV1 1 434 0 4120 91 12 116 chr10 14573031 14573771 -131015517 + MER4A LTR ERV1 2 664 0 365 270 63 0 chr10 14575021 14575132 -131014156 - L2 LINE L2 -1 3271 3154 2362 88 7 3 chr10 14575338 14575645 -131013643 + AluSg SINE Alu 1 308 -2 1725 204 0 6 chr10 14576295 14576609 -131012679 - AluJo SINE Alu 0 312 1 1996 134 0 3 chr10 14576918 14577222 -131012066 - AluSx SINE Alu 0 303 1 241 250 0 0 chr10 14578660 14578712 -131010576 + (TG)n Simple_repeat Simple_repeat 2 53 0 299 253 20 20 chr10 14579471 14579570 -131009718 - MIR3 SINE MIR -28 180 82 4693 149 57 7 chr10 14579672 14580461 -131008827 + L1MB3 LINE L1 5308 6142 -41 1809 154 21 3 chr10 14580461 14580768 -131008520 - AluSx SINE Alu 0 312 1 4693 149 57 7 chr10 14580768 14580810 -131008478 + L1MB3 LINE L1 6142 6180 -3 192 125 0 0 chr10 14581175 14581207 -131008081 + (GGGGA)n Simple_repeat Simple_repeat 4 35 0 181 269 19 0 chr10 14581790 14581842 -131007446 - MIR3 SINE MIR -25 183 131 231 270 54 27 chr10 14581859 14581970 -131007318 - L2 LINE L2 -809 2505 2392 256 305 116 32 chr10 14582044 14582139 -131007149 + MIR3 SINE MIR 4 106 -102 453 285 0 31 chr10 14582512 14582642 -131006646 - MIR SINE MIR -129 133 8 655 221 68 0 chr10 14582898 14583061 -131006227 + MIR SINE MIR 64 237 -25 228 111 0 0 chr10 14583259 14583295 -131005993 + (CACAA)n Simple_repeat Simple_repeat 2 37 0 3002 140 100 2 chr10 14584199 14584679 -131004609 - MER1A DNA MER1_type 0 527 1 532 237 84 28 chr10 14584702 14584917 -131004371 + MIR SINE MIR 28 254 -8 2438 82 3 3 chr10 14585341 14585644 -131003644 + AluSg SINE Alu 1 303 -7 1620 159 3 97 chr10 14586207 14586528 -131002760 - AluJo SINE Alu -10 292 2 2217 129 140 11 chr10 14586710 14587089 -131002199 - MSTA LTR MaLR 0 428 1 2270 200 39 6 chr10 14588001 14588511 -131000777 + L1PA16 LINE L1 5624 6150 -16 241 224 0 0 chr10 14588557 14588606 -131000682 + CT-rich Low_complexity Low_complexity 3 51 0 2458 81 3 3 chr10 14588977 14589286 -131000002 - AluY SINE Alu -2 309 1 1495 168 4 15 chr10 14589454 14589716 -130999572 + AluJo SINE Alu 41 299 -13 425 242 74 37 chr10 14590213 14590403 -130998885 - MER117 DNA MER1_type 0 197 1 569 287 146 29 chr10 14590541 14590959 -130998329 + LTR33A LTR ERVL 23 489 -34 1559 170 18 18 chr10 14591873 14592155 -130997133 + AluJo SINE Alu 9 290 -22 492 272 96 83 chr10 14592806 14593130 -130996158 + L1ME3A LINE L1 5553 5880 -284 1635 184 3 20 chr10 14595192 14595491 -130993797 + AluJo SINE Alu 12 305 -7 264 185 0 0 chr10 14595491 14595545 -130993743 + GA-rich Low_complexity Low_complexity 2 55 0 965 144 0 6 chr10 14595547 14595727 -130993561 + (GGA)n Simple_repeat Simple_repeat 1 179 0 322 152 15 15 chr10 14596089 14596155 -130993133 - MER33 DNA MER1_type -4 320 255 5039 141 26 54 chr10 14596156 14596620 -130992668 + L1MA4A LINE L1 4326 4801 -1375 2046 131 3 3 chr10 14596620 14596911 -130992377 + AluSx SINE Alu 1 291 -21 5039 141 26 54 chr10 14596911 14597586 -130991702 + L1MA4A LINE L1 4801 5433 -743 5112 126 37 20 chr10 14597657 14597808 -130991480 + L1MA4A LINE L1 5433 5580 -723 2289 97 0 7 chr10 14597808 14598108 -130991180 - AluSq SINE Alu -15 298 1 5112 126 37 20 chr10 14598108 14598812 -130990476 + L1MA4A LINE L1 5580 6303 0 895 218 28 23 chr10 14598883 14599099 -130990189 - MER33 DNA MER1_type -106 218 2 228 35 0 0 chr10 14599483 14599512 -130989776 + (T)n Simple_repeat Simple_repeat 1 29 0 197 245 0 41 chr10 14600449 14600498 -130988790 + L2 LINE L2 3224 3270 -2 264 320 68 27 chr10 14601488 14601635 -130987653 + MIR SINE MIR 34 186 -76 1140 110 129 29 chr10 14601638 14601847 -130987441 - MER30 DNA MER1_type 0 230 1 5205 149 22 10 chr10 14601880 14602872 -130986416 + L1PA16 LINE L1 5159 6163 -3 213 205 24 60 chr10 14602921 14603087 -130986201 + (TATAA)n Simple_repeat Simple_repeat 3 162 0 181 325 48 0 chr10 14603747 14603830 -130985458 - L2 LINE L2 0 3272 3186 780 226 73 8 chr10 14603831 14604079 -130985209 + L1MA4 LINE L1 6029 6292 -8 2111 138 0 22 chr10 14604102 14604421 -130984867 + AluSx SINE Alu 1 312 0 276 253 103 0 chr10 14605042 14605129 -130984159 + MER63 DNA MER1_type 1 722 -340 310 285 263 0 chr10 14605534 14605713 -130983575 - MIR SINE MIR 0 262 37 1589 205 61 49 chr10 14606083 14606512 -130982776 + LTR47B LTR ERVL 10 443 0 219 324 69 59 chr10 14606573 14606777 -130982511 - L3b LINE CR1 -195 1388 1183 227 189 22 22 chr10 14607632 14607722 -130981566 + CT-rich Low_complexity Low_complexity 1 90 0 205 138 0 0 chr10 14610412 14610441 -130978847 + (GGA)n Simple_repeat Simple_repeat 2 30 0 277 131 33 0 chr10 14611117 14611178 -130978110 + CT-rich Low_complexity Low_complexity 1 63 0 335 60 20 0 chr10 14611387 14611437 -130977851 + (TTCA)n Simple_repeat Simple_repeat 2 52 0 444 19 0 0 chr10 14611723 14611776 -130977512 + (TG)n Simple_repeat Simple_repeat 1 53 0 1834 153 10 10 chr10 14612379 14612673 -130976615 - AluJo SINE Alu -10 302 9 351 274 9 38 chr10 14612949 14613055 -130976233 - L2 LINE L2 0 3313 3211 2316 96 3 3 chr10 14613323 14613626 -130975662 - AluSc SINE Alu -4 305 3 1635 157 98 11 chr10 14614042 14614329 -130974959 - AluSx SINE Alu 0 312 1 309 298 8 24 chr10 14614833 14614957 -130974331 - MIR SINE MIR -9 253 132 200 333 0 0 chr10 14615192 14615255 -130974033 - L2 LINE L2 0 3313 3251 2062 145 7 7 chr10 14616608 14616918 -130972370 + AluSx SINE Alu 1 310 -2 253 265 159 8 chr10 14617019 14617151 -130972137 - MIR SINE MIR -10 252 101 356 200 35 0 chr10 14618461 14618546 -130970742 - L1MA7 LINE L1 0 6291 6204 1920 159 0 14 chr10 14618553 14618849 -130970439 - AluJb SINE Alu -18 294 3 1469 192 4 29 chr10 14619118 14619394 -130969894 + AluJo SINE Alu 5 273 -39 1846 81 95 32 chr10 14620977 14621260 -130968028 - AluSg SINE Alu -1 309 9 26 0 0 0 chr10 14621659 14621685 -130967603 + AT_rich Low_complexity Low_complexity 1 26 0 183 80 0 0 chr10 14622994 14623019 -130966269 + (A)n Simple_repeat Simple_repeat 1 25 0 263 230 30 30 chr10 14623123 14623223 -130966065 + MER72 LTR ERV1 377 476 -246 394 196 155 21 chr10 14623248 14623446 -130965842 + LTR45B LTR ERV1 264 525 0 1446 207 21 17 chr10 14623704 14623994 -130965294 + AluJo SINE Alu 11 301 -11 261 139 0 0 chr10 14623994 14624037 -130965251 + (GGGA)n Simple_repeat Simple_repeat 1 43 0 281 260 140 0 chr10 14624132 14624232 -130965056 - MIR3 SINE MIR -10 198 85 772 186 0 7 chr10 14624445 14624585 -130964703 + AluJb SINE Alu 92 230 -82 1503 194 0 4 chr10 14625514 14625782 -130963506 + AluJb SINE Alu 36 302 -10 2368 95 0 0 chr10 14626148 14626444 -130962844 + AluSq SINE Alu 1 296 -17 182 275 50 25 chr10 14626546 14626626 -130962662 - MIR SINE MIR -93 115 34 189 244 0 0 chr10 14626981 14627022 -130962266 - MIR SINE MIR -110 152 112 473 162 49 162 chr10 14627165 14627220 -130962068 - LTR45B LTR ERV1 -15 474 414 1469 175 13 58 chr10 14627220 14627529 -130961759 - AluJo SINE Alu -4 308 14 473 162 49 162 chr10 14627529 14627706 -130961582 - LTR45B LTR ERV1 -75 414 304 180 0 0 0 chr10 14628662 14628682 -130960606 + (TC)n Simple_repeat Simple_repeat 1 20 0 237 146 0 0 chr10 14630302 14630350 -130958938 + (CA)n Simple_repeat Simple_repeat 1 48 0 31 44 0 0 chr10 14630540 14630585 -130958703 + AT_rich Low_complexity Low_complexity 1 45 0 205 273 0 0 chr10 14631064 14631119 -130958169 + (TTCA)n Simple_repeat Simple_repeat 4 58 0 2388 56 0 3 chr10 14631186 14631492 -130957796 + AluY SINE Alu 1 311 0 231 188 20 59 chr10 14631634 14631735 -130957553 + (TTATA)n Simple_repeat Simple_repeat 2 98 0 309 155 0 0 chr10 14632988 14633046 -130956242 + (CA)n Simple_repeat Simple_repeat 1 58 0 1934 115 87 0 chr10 14634231 14634517 -130954771 - AluSq SINE Alu -2 311 1 584 261 102 28 chr10 14635634 14635849 -130953439 + MIR SINE MIR 32 262 0 414 0 0 0 chr10 14636139 14636185 -130953103 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 664 138 0 43 chr10 14636188 14636304 -130952984 - AluSg/x SINE Alu -26 283 173 1764 130 0 0 chr10 14636304 14636543 -130952745 - AluSq SINE Alu -71 242 4 27 29 0 0 chr10 14636714 14636748 -130952540 + AT_rich Low_complexity Low_complexity 1 34 0 601 123 29 36 chr10 14636748 14636886 -130952402 - L1MA7 LINE L1 -2 6289 6153 951 129 17 51 chr10 14636886 14637064 -130952224 - AluJo SINE Alu -17 295 124 1576 107 4 25 chr10 14637152 14637394 -130951894 - AluSx SINE Alu -16 296 60 1351 231 207 17 chr10 14637594 14638251 -130951037 + LTR50 LTR ERVL 14 795 0 2239 90 0 45 chr10 14638708 14639018 -130950270 + AluSg SINE Alu 1 296 -14 2273 81 3 0 chr10 14639247 14639565 -130949723 - AluSx SINE Alu 0 319 1 1910 157 3 3 chr10 14639643 14639937 -130949351 - AluJb SINE Alu -18 294 1 1736 160 20 20 chr10 14641006 14641300 -130947988 + AluJb SINE Alu 1 294 -18 234 91 0 0 chr10 14641908 14641941 -130947347 + (T)n Simple_repeat Simple_repeat 1 33 0 696 217 6 12 chr10 14642055 14642216 -130947072 - MER3 DNA MER1_type -43 166 7 2226 125 0 0 chr10 14642389 14642694 -130946594 + AluSx SINE Alu 1 305 -7 2044 130 0 37 chr10 14643380 14643704 -130945584 + AluSx SINE Alu 1 312 0 561 287 81 60 chr10 14643748 14644096 -130945192 + L1ME4a LINE L1 5524 5878 -243 1469 77 10 0 chr10 14644103 14644297 -130944991 - Charlie3 DNA MER1_type -4 2706 2511 196 287 49 63 chr10 14644394 14644537 -130944751 + MIR SINE MIR 117 257 -5 297 0 0 0 chr10 14644552 14644585 -130944703 + (CA)n Simple_repeat Simple_repeat 1 33 0 344 245 109 54 chr10 14644595 14644742 -130944546 + L1ME4a LINE L1 5964 6118 -3 1625 182 17 7 chr10 14644784 14645075 -130944213 + AluJo SINE Alu 1 294 -18 281 171 0 43 chr10 14645983 14646053 -130943235 - MLT1C LTR MaLR -202 265 199 283 186 35 115 chr10 14646221 14646334 -130942954 + MLT1B LTR MaLR 76 179 -288 2193 59 96 0 chr10 14646335 14646605 -130942683 + AluY SINE Alu 5 300 -11 1001 170 0 13 chr10 14646605 14646764 -130942524 + AluJb SINE Alu 135 291 -21 638 195 17 126 chr10 14646774 14646985 -130942303 + MLT1B LTR MaLR 185 371 -19 1616 179 135 3 chr10 14646985 14647304 -130941984 + MLT1A1 LTR MaLR 1 361 -4 638 195 17 126 chr10 14647304 14647323 -130941965 + MLT1B LTR MaLR 371 390 0 256 250 120 11 chr10 14647432 14647524 -130941764 - L2 LINE L2 -18 3254 3153 1992 138 0 3 chr10 14647581 14647894 -130941394 - AluSg SINE Alu 0 312 1 555 314 54 8 chr10 14648050 14648292 -130940996 - MIR SINE MIR -2 260 8 1752 173 0 24 chr10 14649820 14650143 -130939145 + AluJo SINE Alu 1 316 0 556 292 109 0 chr10 14650171 14650363 -130938925 - MIR SINE MIR -3 259 47 1447 137 48 36 chr10 14650582 14650830 -130938458 + THE1B LTR MaLR 1 251 -113 * 1674 122 4 4 chr10 14650825 14651071 -130938217 + THE1B LTR MaLR 119 364 0 234 254 0 0 chr10 14651089 14651152 -130938136 + MER91 DNA MER1_type 78 140 0 474 325 76 0 chr10 14651214 14651371 -130937917 + MIR3 SINE MIR 29 197 -11 820 152 23 8 chr10 14653251 14653383 -130935905 + AluSq/x SINE Alu 2 135 -178 2010 142 30 57 chr10 14654111 14654477 -130934811 + THE1B LTR MaLR 1 356 -8 281 384 29 0 chr10 14654512 14654650 -130934638 + MER91A DNA MER1_type 47 188 -8 2148 128 3 0 chr10 14654694 14654991 -130934297 - AluSx SINE Alu -14 298 1 557 129 20 30 chr10 14655434 14655535 -130933753 + AluSq SINE Alu 2 101 -211 428 17 83 33 chr10 14655535 14655595 -130933693 - THE1B LTR MaLR -301 63 1 1819 88 0 0 chr10 14655620 14655847 -130933441 + AluSq SINE Alu 87 313 0 193 154 0 26 chr10 14656259 14656298 -130932990 - L2 LINE L2 -13 3300 3263 477 34 0 0 chr10 14657642 14657701 -130931587 + (TG)n Simple_repeat Simple_repeat 2 60 0 1702 147 19 8 chr10 14658448 14658713 -130930575 - AluJo SINE Alu -39 273 6 1882 126 4 22 chr10 14659661 14659938 -130929350 + AluSx SINE Alu 1 272 -40 243 61 0 0 chr10 14659952 14659985 -130929303 + (CAA)n Simple_repeat Simple_repeat 1 33 0 1950 164 3 0 chr10 14660321 14660625 -130928663 + AluJb SINE Alu 1 305 -7 222 37 0 0 chr10 14660625 14660652 -130928636 + (GA)n Simple_repeat Simple_repeat 2 28 0 768 77 77 62 chr10 14662970 14663100 -130926188 - L1PA8 LINE L1 -1 6171 6040 277 305 86 8 chr10 14663118 14663246 -130926042 + L2 LINE L2 2218 2355 -959 804 196 10 95 chr10 14663290 14663575 -130925713 - MLT1B LTR MaLR -31 359 1 195 328 90 44 chr10 14663648 14664035 -130925253 + L2 LINE L2 2567 2970 -343 212 239 22 0 chr10 14664056 14664102 -130925186 + CT-rich Low_complexity Low_complexity 2 48 0 2296 125 0 0 chr10 14664102 14664413 -130924875 - AluSx SINE Alu -1 311 1 286 250 53 83 chr10 14664563 14664695 -130924593 + L2 LINE L2 3184 3311 -2 2195 113 7 0 chr10 14664741 14665032 -130924256 - AluSc SINE Alu -15 294 2 425 293 9 0 chr10 14665184 14665300 -130923988 - MER94 DNA DNA -4 130 14 216 122 0 0 chr10 14665939 14665980 -130923308 + (T)n Simple_repeat Simple_repeat 1 41 0 1245 188 21 25 chr10 14666360 14666599 -130922689 - AluJo SINE Alu -73 239 2 491 343 64 4 chr10 14667146 14667382 -130921906 + MIR SINE MIR 13 262 0 6124 199 13 4 chr10 14667483 14668208 -130921080 - L1PA15 LINE L1 0 6165 5448 2361 80 0 13 chr10 14668208 14668507 -130920781 - AluY SINE Alu -16 295 1 6124 199 13 4 chr10 14668507 14669814 -130919474 - L1PA15 LINE L1 -717 5448 4121 390 236 242 13 chr10 14669828 14670045 -130919243 + MIR SINE MIR 3 262 0 2048 117 3 20 chr10 14670149 14670448 -130918840 + AluSx SINE Alu 1 294 -18 2334 62 3 0 chr10 14672020 14672310 -130916978 - AluY SINE Alu -20 291 1 243 0 0 0 chr10 14673858 14673885 -130915403 + (A)n Simple_repeat Simple_repeat 1 27 0 443 122 0 27 chr10 14673899 14673973 -130915315 - AluJo SINE Alu -178 134 63 2148 130 0 3 chr10 14674187 14674494 -130914794 - AluSx SINE Alu -6 306 1 437 299 136 27 chr10 14675002 14675223 -130914065 - MIR SINE MIR -8 254 10 3722 80 0 0 chr10 14675379 14675842 -130913446 - L1PA8 LINE L1 0 6172 5710 2381 59 0 0 chr10 14676209 14676523 -130912765 + AluY SINE Alu 1 314 0 1076 239 8 8 chr10 14679640 14679891 -130909397 + L1MB3 LINE L1 5534 5784 -387 258 136 0 0 chr10 14679898 14679942 -130909346 + (TCCA)n Simple_repeat Simple_repeat 1 44 0 2131 124 46 66 chr10 14679942 14680052 -130909236 + L1MB3 LINE L1 5782 5893 -290 1883 137 105 37 chr10 14680052 14680403 -130908885 + THE1C LTR MaLR 1 375 0 2131 124 46 66 chr10 14680403 14680702 -130908586 + L1MB3 LINE L1 5893 6183 0 369 245 46 46 chr10 14681118 14681269 -130908019 + MLT1I LTR MaLR 16 166 -243 264 305 195 6 chr10 14681501 14681675 -130907613 - MIR SINE MIR -36 226 20 220 313 187 11 chr10 14682094 14682276 -130907012 + MIR SINE MIR 1 214 -48 2352 134 45 18 chr10 14682356 14682736 -130906552 + MLT1B LTR MaLR 1 390 0 462 296 0 0 chr10 14683238 14683493 -130905795 + (CA)n Simple_repeat Simple_repeat 1 255 0 345 117 0 0 chr10 14684358 14684418 -130904870 + (TC)n Simple_repeat Simple_repeat 2 61 0 248 316 42 11 chr10 14684965 14685060 -130904228 - MIR SINE MIR -6 256 159 253 231 0 177 chr10 14685887 14685932 -130903356 - MIR SINE MIR -67 141 90 2214 123 0 3 chr10 14685932 14686240 -130903048 + AluSx SINE Alu 1 307 -5 253 231 0 177 chr10 14686240 14686360 -130902928 - MIR SINE MIR -118 90 2 468 285 47 28 chr10 14686447 14686661 -130902627 + L1ME LINE L1 5597 5814 -307 2009 103 35 14 chr10 14686812 14687124 -130902164 - AluSq SINE Alu 0 313 1 1380 213 86 98 chr10 14687938 14688487 -130900801 + MLT1F LTR MaLR 1 542 0 491 243 57 110 chr10 14688559 14688822 -130900466 + MIR SINE MIR 13 261 -1 3144 216 118 29 chr10 14688903 14689790 -130899498 - L1MC4 LINE L1 -1 8041 7059 227 79 26 0 chr10 14689790 14689828 -130899460 + (TTCA)n Simple_repeat Simple_repeat 4 42 0 3144 216 118 29 chr10 14689828 14689908 -130899380 - L1MC4 LINE L1 -983 7059 6988 370 0 0 0 chr10 14691615 14691658 -130897630 + L1PA3 LINE L1 6110 6152 -3 2034 142 0 10 chr10 14692585 14692887 -130896401 + AluSx SINE Alu 2 300 -12 375 281 54 37 chr10 14692919 14693268 -130896020 + L1ME1 LINE L1 4258 4612 -1534 28 0 0 0 chr10 14693277 14693305 -130895983 + AT_rich Low_complexity Low_complexity 1 28 0 825 177 0 41 chr10 14693565 14693712 -130895576 + FLAM_C SINE Alu 2 142 -1 2012 138 0 7 chr10 14693910 14694207 -130895081 + AluSx SINE Alu 1 295 -17 1739 220 68 20 chr10 14694363 14694804 -130894484 + MLT1C LTR MaLR 6 467 0 3091 230 73 32 chr10 14694809 14696033 -130893255 + L1ME1 LINE L1 4882 6161 -5 23 54 0 0 chr10 14696222 14696259 -130893029 + AT_rich Low_complexity Low_complexity 1 37 0 353 225 172 33 chr10 14697720 14697871 -130891417 + MIR3 SINE MIR 5 176 -32 393 351 27 20 chr10 14698527 14698675 -130890613 + MIR3 SINE MIR 42 190 -18 360 0 0 0 chr10 14698805 14698845 -130890443 + (CA)n Simple_repeat Simple_repeat 2 41 0 248 299 0 11 chr10 14698845 14698932 -130890356 + CT-rich Low_complexity Low_complexity 4 89 0 291 304 80 32 chr10 14699117 14699242 -130890046 + MIR SINE MIR 58 188 -74 346 248 66 8 chr10 14700958 14701079 -130888209 - MIR SINE MIR -48 214 87 201 343 27 0 chr10 14701347 14701420 -130887868 - L2 LINE L2 0 3272 3198 2236 85 0 7 chr10 14701642 14701935 -130887353 - AluSg SINE Alu -19 291 1 921 150 26 107 chr10 14702960 14703193 -130886095 - MER20 DNA MER1_type -5 214 1 303 28 0 0 chr10 14703354 14703390 -130885898 + (TG)n Simple_repeat Simple_repeat 1 36 0 352 289 106 59 chr10 14704191 14704385 -130884903 - MIR SINE MIR -55 207 1 1539 196 44 69 chr10 14706146 14706578 -130882710 - MLT1D LTR MaLR 0 505 85 246 178 0 0 chr10 14706578 14706623 -130882665 + MLT2B3 LTR ERVL 1 45 -509 1800 201 5 62 chr10 14706804 14707193 -130882095 + MLT2B3 LTR ERVL 182 548 -6 609 157 0 0 chr10 14707197 14707286 -130882002 - MLT1D LTR MaLR -415 90 2 2834 194 55 19 chr10 14707515 14707727 -130881561 - MER6A DNA MER2_type -260 605 402 2144 176 106 3 chr10 14707727 14708113 -130881175 - MSTB LTR MaLR 0 426 1 2834 194 55 19 chr10 14708113 14708484 -130880804 - MER6A DNA MER2_type -463 402 1 43 20 0 0 chr10 14708807 14708857 -130880431 + AT_rich Low_complexity Low_complexity 1 50 0 305 305 40 20 chr10 14709062 14709213 -130880075 - MLT1I LTR MaLR -188 221 68 477 66 16 0 chr10 14709454 14709515 -130879773 - MSTB LTR MaLR -49 377 316 1543 201 39 7 chr10 14709786 14709912 -130879376 + AluSx SINE Alu 1 122 -190 468 51 0 0 chr10 14709912 14709971 -130879317 + (CA)n Simple_repeat Simple_repeat 2 60 0 1543 201 39 7 chr10 14709971 14710127 -130879161 + AluSx SINE Alu 122 292 -20 277 196 36 0 chr10 14710704 14710760 -130878528 - L2 LINE L2 0 3272 3215 196 188 203 47 chr10 14711212 14711276 -130878012 - MIR SINE MIR -70 138 65 1789 185 3 0 chr10 14712617 14712919 -130876369 + AluJo SINE Alu 1 303 -9 252 345 83 7 chr10 14712928 14713073 -130876215 + MIR3 SINE MIR 37 192 -16 1668 181 17 0 chr10 14713734 14714022 -130875266 - AluJb SINE Alu -19 293 1 1870 186 42 31 chr10 14714130 14714490 -130874798 + MLT1A1 LTR MaLR 2 365 0 2034 127 6 38 chr10 14716043 14716359 -130872929 - AluSx SINE Alu -6 306 1 200 327 125 0 chr10 14716601 14716705 -130872583 - MIR SINE MIR -62 200 84 314 244 200 0 chr10 14716774 14716889 -130872399 - MIR3 SINE MIR -61 147 10 732 186 0 0 chr10 14717176 14717289 -130871999 - FLAM_A SINE Alu -12 130 18 1820 153 26 110 chr10 14717692 14717844 -130871444 + MLT1B LTR MaLR 1 164 -226 2402 103 3 0 chr10 14717844 14718156 -130871132 - AluSp SINE Alu 0 313 1 1820 153 26 110 chr10 14718156 14718429 -130870859 + MLT1B LTR MaLR 164 390 0 1130 133 0 0 chr10 14718431 14718604 -130870684 - L1MB3 LINE L1 -10 6173 6001 2028 154 31 34 chr10 14718769 14719126 -130870162 - THE1B LTR MaLR -8 356 1 180 279 38 51 chr10 14720594 14720673 -130868615 + MIR SINE MIR 38 115 -147 499 327 22 22 chr10 14720688 14720914 -130868374 - MIR SINE MIR 0 262 37 250 286 95 16 chr10 14720928 14721054 -130868234 + MIR SINE MIR 119 254 -8 2135 115 0 16 chr10 14721230 14721534 -130867754 + AluY SINE Alu 1 299 -12 368 262 0 29 chr10 14721692 14721795 -130867493 + L2 LINE L2 2985 3084 -188 319 296 180 5 chr10 14722409 14722598 -130866690 + MIR SINE MIR 31 252 -10 221 341 65 8 chr10 14724173 14724296 -130864992 + L2 LINE L2 3184 3313 0 30 0 0 0 chr10 14725434 14725464 -130863824 + AT_rich Low_complexity Low_complexity 1 30 0 5168 142 15 35 chr10 14725464 14726456 -130862832 - L1MB1 LINE L1 0 6168 5194 * 5448 199 46 11 chr10 14726455 14727643 -130861645 + L1MB1 LINE L1 3960 5189 -957 415 212 80 29 chr10 14727654 14727791 -130861497 + MIR SINE MIR 119 262 0 1236 283 169 27 chr10 14728304 14729383 -130859905 + L1ME3 LINE L1 3768 4693 -1469 2322 96 0 3 chr10 14729383 14729675 -130859613 + AluY SINE Alu 1 291 -20 1236 283 169 27 chr10 14729675 14729951 -130859337 + L1ME3 LINE L1 4693 4929 -1233 2262 160 79 5 chr10 14729951 14730320 -130858968 + MSTD LTR MaLR 1 396 0 1236 283 169 27 chr10 14730320 14730860 -130858428 + L1ME3 LINE L1 4929 5951 -211 503 267 62 11 chr10 14733753 14733929 -130855359 - MER117 DNA MER1_type -10 187 3 181 255 20 71 chr10 14734674 14734772 -130854516 - L2 LINE L2 -706 2608 2516 * 236 330 198 0 chr10 14734754 14734860 -130854428 + MIR3 SINE MIR 34 160 -48 1068 214 35 0 chr10 14734871 14735072 -130854216 + MER58A DNA MER1_type 17 224 0 562 266 155 29 chr10 14735177 14735455 -130853833 - Charlie8 DNA MER1_type -2008 409 97 292 312 28 0 chr10 14735860 14735969 -130853319 + MER81 DNA DNA 2 113 -1 245 317 130 8 chr10 14736310 14736433 -130852855 - MIR SINE MIR -67 195 58 250 386 0 0 chr10 14736613 14736727 -130852561 + L3b LINE CR1 1120 1233 -350 224 208 292 0 chr10 14737329 14737401 -130851887 + MIR SINE MIR 55 147 -61 1601 265 77 42 chr10 14737686 14738247 -130851041 + MER77 LTR ERV1 49 598 -7 774 268 127 0 chr10 14739286 14739491 -130849797 + MIR SINE MIR 6 236 -26 339 313 57 57 chr10 14739927 14740103 -130849185 + MER5B DNA MER1_type 1 176 -2 582 211 176 0 chr10 14740123 14740265 -130849023 - MER5A DNA MER1_type -3 186 20 3366 160 5 55 chr10 14740617 14741266 -130848022 - L1MB3 LINE L1 -174 6009 5394 1191 240 59 52 chr10 14741555 14741963 -130847325 + LTR16C LTR ERVL 81 491 0 3478 107 18 10 chr10 14742509 14743004 -130846284 + L1PA11 LINE L1 5659 6157 -17 21 0 0 0 chr10 14745256 14745277 -130844011 + AT_rich Low_complexity Low_complexity 1 21 0 1591 207 0 0 chr10 14746034 14746314 -130842974 + AluJb SINE Alu 1 280 -32 191 0 24 71 chr10 14746317 14746359 -130842929 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 266 336 19 19 chr10 14746369 14746476 -130842812 + MER5A DNA MER1_type 83 189 0 2209 174 36 128 chr10 14747198 14747872 -130841416 + LTR9 LTR ERV1 1 612 0 797 269 26 19 chr10 14749288 14749556 -130839732 + L1MC4a LINE L1 5559 5828 -1980 1156 175 0 10 chr10 14749558 14749764 -130839524 + AluJb SINE Alu 105 308 -4 1728 179 0 32 chr10 14749945 14750258 -130839030 + AluJo SINE Alu 3 305 -7 513 337 20 0 chr10 14750822 14751018 -130838270 - LTR67 LTR ERVL 0 557 358 733 170 50 66 chr10 14751332 14751514 -130837774 + MLT1L LTR MaLR 216 394 -221 450 317 149 43 chr10 14751601 14752324 -130836964 + L2 LINE L2 1685 2484 -830 245 339 18 37 chr10 14752375 14752484 -130836804 + L2 LINE L2 2652 2758 -556 469 310 35 0 chr10 14752714 14752830 -130836458 - L2 LINE L2 -2 3270 3151 1158 219 180 27 chr10 14753054 14753387 -130835901 + MSTD LTR MaLR 1 384 -12 198 103 0 0 chr10 14753388 14753417 -130835871 + (GAA)n Simple_repeat Simple_repeat 2 30 0 285 296 138 26 chr10 14753577 14753766 -130835522 + MLT1K LTR MaLR 335 544 -44 202 344 103 49 chr10 14753832 14754239 -130835049 + L2 LINE L2 2538 2966 -348 269 247 31 117 chr10 14754326 14754488 -130834800 + L2 LINE L2 3122 3269 -44 329 234 0 9 chr10 14754519 14754626 -130834662 + GA-rich Low_complexity Low_complexity 4 109 0 1516 288 68 23 chr10 14755649 14756211 -130833077 + MLT1G LTR MaLR 1 587 -3 221 0 35 0 chr10 14756213 14756242 -130833046 + (TC)n Simple_repeat Simple_repeat 1 30 0 180 0 0 0 chr10 14756241 14756261 -130833027 + (CA)n Simple_repeat Simple_repeat 1 20 0 * 181 348 67 34 chr10 14756606 14757023 -130832265 + L2 LINE L2 2230 2660 -654 456 332 70 41 chr10 14757740 14758083 -130831205 + L2 LINE L2 2960 3312 -1 193 169 34 0 chr10 14758190 14758249 -130831039 + (TA)n Simple_repeat Simple_repeat 2 62 0 541 336 91 48 chr10 14758384 14758641 -130830647 - L2 LINE L2 -447 2867 2623 2475 121 114 8 chr10 14758641 14759028 -130830260 + MSTA LTR MaLR 1 428 0 541 336 91 48 chr10 14759028 14759422 -130829866 - L2 LINE L2 -691 2623 2188 268 320 55 8 chr10 14760154 14760282 -130829006 - MIR SINE MIR -7 255 122 580 256 88 57 chr10 14760773 14761000 -130828288 + MLT1K LTR MaLR 324 557 -31 2106 104 0 17 chr10 14761529 14761838 -130827450 - AluSx SINE Alu 0 304 1 246 343 29 10 chr10 14761838 14761996 -130827292 + MIR SINE MIR 54 216 -46 196 200 0 0 chr10 14762591 14762626 -130826662 + L2 LINE L2 3268 3302 -11 21 57 0 0 chr10 14762892 14762927 -130826361 + AT_rich Low_complexity Low_complexity 1 35 0 223 291 86 26 chr10 14764310 14764461 -130824827 - MIR3 SINE MIR -22 186 27 333 68 0 0 chr10 14765509 14765553 -130823735 + (TG)n Simple_repeat Simple_repeat 1 44 0 267 85 0 51 chr10 14767818 14767877 -130821411 + (TCCC)n Simple_repeat Simple_repeat 2 57 0 1399 201 0 82 chr10 14768412 14768740 -130820548 + AluJo SINE Alu 1 301 -11 194 293 17 0 chr10 14768746 14768804 -130820484 + L2 LINE L2 3254 3312 -1 1765 148 12 70 chr10 14768804 14769134 -130820154 + AluSx SINE Alu 1 311 -1 1919 152 0 13 chr10 14771489 14771791 -130817497 + AluSx SINE Alu 1 298 -14 2755 259 24 53 chr10 14772570 14773502 -130815786 + L1ME1 LINE L1 37 941 -5455 2849 257 62 33 chr10 14773554 14774938 -130814350 + L1ME1 LINE L1 1145 4446 -1769 1446 246 81 21 chr10 14774930 14775409 -130813879 + L1MB8 LINE L1 5662 6169 -9 * 1025 212 62 78 chr10 14775418 14775776 -130813512 + L1ME1 LINE L1 5877 6228 -7 2410 97 7 0 chr10 14775860 14776202 -130813086 - AluSx SINE Alu 0 344 1 2129 73 0 77 chr10 14776584 14776897 -130812391 - AluSg SINE Alu -21 289 1 210 71 0 0 chr10 14777973 14778001 -130811287 + (A)n Simple_repeat Simple_repeat 1 28 0 1951 165 7 0 chr10 14778540 14778837 -130810451 - AluSx SINE Alu -12 300 2 984 281 169 23 chr10 14780219 14780986 -130808302 + L2 LINE L2 2420 3300 -13 26 30 0 0 chr10 14781754 14781787 -130807501 + AT_rich Low_complexity Low_complexity 1 33 0 3049 156 46 13 chr10 14782092 14782636 -130806652 + L1MC3 LINE L1 7223 7784 -1 2560 65 7 0 chr10 14782648 14782957 -130806331 + AluY SINE Alu 1 311 0 2356 108 73 14 chr10 14783907 14784251 -130805037 - THE1B LTR MaLR 0 364 1 1544 183 30 0 chr10 14784431 14784699 -130804589 + AluJo SINE Alu 11 286 -26 361 209 0 36 chr10 14784700 14784810 -130804478 + (CATATA)n Simple_repeat Simple_repeat 2 107 0 1979 152 108 33 chr10 14786732 14787235 -130802053 - MLT2A2 LTR ERVL 0 554 1 1197 168 124 51 chr10 14787508 14787782 -130801506 + MLT2B2 LTR ERVL 1 294 -221 920 253 23 19 chr10 14787784 14788041 -130801247 - LTR9 LTR ERV1 0 612 355 905 112 0 16 chr10 14788253 14788378 -130800910 + FRAM SINE Alu 34 156 -20 2251 84 26 23 chr10 14788800 14789109 -130800179 + AluY SINE Alu 1 310 -1 445 221 103 29 chr10 14791304 14791440 -130797848 + LTR33 LTR ERVL 3 148 -373 574 285 0 0 chr10 14791698 14791828 -130797460 + MER31B-int LTR ERV1 13 142 -4794 * 810 256 28 0 chr10 14791827 14792007 -130797281 + MER31B-int LTR ERV1 4734 4918 -18 1692 193 93 34 chr10 14792013 14792422 -130796866 + MER31B LTR ERV1 5 437 -29 353 203 0 0 chr10 14792444 14792508 -130796780 + LTR33 LTR ERVL 458 521 0 288 235 0 15 chr10 14794163 14794231 -130795057 - MLT1B LTR MaLR 0 390 324 2174 109 0 7 chr10 14794231 14794516 -130794772 + AluSc SINE Alu 1 283 -26 1040 166 0 0 chr10 14794521 14794715 -130794573 + AluSg/x SINE Alu 123 316 0 2207 94 13 13 chr10 14794718 14795017 -130794271 + AluY SINE Alu 1 299 -12 712 226 84 82 chr10 14795017 14795491 -130793797 + L1MC4 LINE L1 7567 8041 -1 216 0 0 0 chr10 14796402 14796426 -130792862 + (A)n Simple_repeat Simple_repeat 1 24 0 1683 146 58 143 chr10 14796774 14797207 -130792081 - MSTD LTR MaLR 0 396 1 1325 184 78 39 chr10 14797740 14798099 -130791189 - Charlie1b DNA MER1_type -100 423 51 263 307 0 0 chr10 14798234 14798309 -130790979 - L2 LINE L2 0 3313 3239 1330 197 119 25 chr10 14798310 14798630 -130790658 + MLT1A1 LTR MaLR 11 360 -5 268 212 45 0 chr10 14798630 14798696 -130790592 - L2 LINE L2 -70 3243 3175 433 243 36 0 chr10 14798761 14798872 -130790416 - MIR SINE MIR -101 161 47 1593 144 0 96 chr10 14799519 14799831 -130789457 - AluJb SINE Alu -30 282 1 269 262 74 0 chr10 14799838 14799960 -130789328 + L2 LINE L2 2202 2332 -982 407 360 80 0 chr10 14800279 14800518 -130788770 + MIR SINE MIR 5 262 0 2244 107 0 7 chr10 14801876 14802186 -130787102 + AluSx SINE Alu 1 308 -4 617 271 43 29 chr10 14802628 14802835 -130786453 + MIR SINE MIR 5 214 -48 235 283 10 50 chr10 14802920 14803019 -130786269 - MIR3 SINE MIR -3 205 111 287 256 70 0 chr10 14803156 14803242 -130786046 + MER91C DNA MER1_type 1 92 -48 537 260 132 56 chr10 14803567 14803975 -130785313 + MLT1H LTR MaLR 108 546 -3 2012 105 4 0 chr10 14804196 14804462 -130784826 - AluSg SINE Alu -18 292 26 266 242 0 0 chr10 14804584 14804650 -130784638 - MIR SINE MIR -163 99 34 2061 133 3 19 chr10 14804833 14805150 -130784138 - AluJb SINE Alu 0 312 1 809 313 4 4 chr10 14805688 14805950 -130783338 - MIR SINE MIR 0 262 1 1183 253 56 11 chr10 14806189 14806607 -130782681 - MLT1J LTR MaLR -6 505 12 869 152 0 0 chr10 14806961 14807099 -130782189 + MSTD LTR MaLR 1 138 -258 214 288 9 72 chr10 14807115 14807226 -130782062 - MIR SINE MIR -9 253 150 828 241 15 20 chr10 14807288 14807487 -130781801 + MSTD LTR MaLR 168 365 0 198 0 0 0 chr10 14807702 14807724 -130781564 + (A)n Simple_repeat Simple_repeat 1 22 0 381 277 83 14 chr10 14807908 14808172 -130781116 - L1MC4a LINE L1 -1913 5895 5581 311 297 140 18 chr10 14809223 14809593 -130779695 + L2 LINE L2 2590 3021 -292 539 286 35 52 chr10 14809825 14810112 -130779176 + L2 LINE L2 3031 3312 -1 1746 148 0 38 chr10 14810642 14810933 -130778355 - AluJb SINE Alu -20 292 13 1842 143 4 7 chr10 14811415 14811695 -130777593 + AluSx SINE Alu 1 279 -33 752 131 0 8 chr10 14811699 14811829 -130777459 + (GGGAA)n Simple_repeat Simple_repeat 2 130 0 4764 75 33 8 chr10 14812391 14813027 -130776261 + LTR8 LTR ERV1 1 652 -39 233 278 157 0 chr10 14813120 14813228 -130776060 + L2 LINE L2 2607 2731 -583 2384 78 3 0 chr10 14813287 14813580 -130775708 + AluSp SINE Alu 5 298 -15 2179 153 44 33 chr10 14813613 14814158 -130775130 + MLT2A2 LTR ERVL 1 554 0 354 248 90 55 chr10 14814528 14814586 -130774702 + L2 LINE L2 3121 3176 -96 3704 144 41 3 chr10 14814586 14815198 -130774090 + MER41B LTR ERV1 1 635 0 354 248 90 55 chr10 14815198 14815284 -130774004 + L2 LINE L2 3176 3270 -2 2948 137 23 19 chr10 14815364 14815847 -130773441 - LTR45B LTR ERV1 -2 487 3 1916 197 53 14 chr10 14816771 14817202 -130772086 + LTR65 LTR ERV1 165 612 -57 2088 112 3 11 chr10 14817203 14817489 -130771799 + AluSx SINE Alu 1 284 -28 251 312 11 0 chr10 14817811 14817904 -130771384 + MIR SINE MIR 169 262 0 1581 248 100 11 chr10 14818087 14818721 -130770567 + L2 LINE L2 2380 3120 -193 312 91 0 0 chr10 14818721 14818765 -130770523 + (CA)n Simple_repeat Simple_repeat 1 44 0 1581 248 100 11 chr10 14818765 14818979 -130770309 + L2 LINE L2 3120 3313 0 698 235 38 6 chr10 14819374 14819557 -130769731 + MER5A DNA MER1_type 1 189 0 1940 162 0 3 chr10 14819638 14819947 -130769341 + AluJo SINE Alu 1 308 -4 2174 135 3 0 chr10 14820570 14820881 -130768407 + AluSx SINE Alu 1 312 0 4452 176 40 12 chr10 14820970 14821851 -130767437 + L1MB3 LINE L1 5278 6180 -3 277 320 75 14 chr10 14821904 14822051 -130767237 + L2 LINE L2 2828 2983 -289 398 207 188 125 chr10 14822081 14822493 -130766795 + MLT1J2 LTR MaLR 1 427 -19 258 328 147 0 chr10 14822650 14822766 -130766522 + L2 LINE L2 3140 3272 0 241 341 91 0 chr10 14823205 14823337 -130765951 + MIR3 SINE MIR 20 163 -45 1460 182 70 3 chr10 14823416 14823718 -130765570 + MER33 DNA MER1_type 1 322 -2 2195 108 0 26 chr10 14824032 14824339 -130764949 + AluSc SINE Alu 1 299 -10 1848 122 0 11 chr10 14824452 14824722 -130764566 - AluSx SINE Alu 0 312 46 4184 84 56 25 chr10 14824722 14825314 -130763974 + LTR66 LTR ERVL 1 610 0 400 40 0 0 chr10 14825314 14825364 -130763924 - AluSx SINE Alu -253 50 1 326 185 15 0 chr10 14825543 14825608 -130763680 + MER5A DNA MER1_type 26 91 -98 9027 110 9 3 chr10 14825797 14827072 -130762216 + HSMAR1 DNA Mariner 1 1283 -4 324 338 62 29 chr10 14827500 14827710 -130761578 + L2 LINE L2 3097 3313 0 2227 108 0 10 chr10 14828625 14828922 -130760366 + AluSx SINE Alu 7 300 -12 1729 78 74 47 chr10 14828975 14829231 -130760057 - AluSc SINE Alu -9 300 38 218 289 132 13 chr10 14830178 14830254 -130759034 + L2 LINE L2 3134 3218 -54 189 0 0 0 chr10 14830840 14830861 -130758427 + (CATATA)n Simple_repeat Simple_repeat 6 26 0 1129 149 56 19 chr10 14831235 14831449 -130757839 + MLT2B1 LTR ERVL 1 222 -298 840 145 0 29 chr10 14831449 14831587 -130757701 - FLAM_C SINE Alu -9 134 1 1225 233 19 22 chr10 14831588 14831859 -130757429 + MLT2B3 LTR ERVL 226 495 -59 546 29 0 0 chr10 14831859 14831927 -130757361 + (TCTA)n Simple_repeat Simple_repeat 2 69 0 1962 159 3 0 chr10 14832085 14832386 -130756902 - AluSx SINE Alu -10 302 1 419 89 0 0 chr10 14832914 14832970 -130756318 + MADE1 DNA Mariner 25 80 0 2023 113 0 17 chr10 14833136 14833429 -130755859 - AluSx SINE Alu -3 309 22 180 0 0 0 chr10 14834367 14834387 -130754901 + (A)n Simple_repeat Simple_repeat 1 20 0 26 0 0 0 chr10 14834619 14834645 -130754643 + AT_rich Low_complexity Low_complexity 1 26 0 186 382 0 0 chr10 14834841 14834909 -130754379 - MIR SINE MIR -106 102 35 2253 135 27 40 chr10 14835002 14835269 -130754019 + L1MA2 LINE L1 5865 6125 -179 2138 113 3 10 chr10 14835269 14835562 -130753726 - AluSc SINE Alu -18 291 1 2253 135 27 40 chr10 14835562 14835738 -130753550 + L1MA2 LINE L1 6125 6302 -2 740 178 108 0 chr10 14836147 14836304 -130752984 + AluJo SINE Alu 14 187 -125 458 222 0 0 chr10 14836320 14836401 -130752887 + FLAM_A SINE Alu 5 85 -57 1787 237 40 9 chr10 14837513 14837961 -130751327 + MLT1C LTR MaLR 6 467 0 228 277 88 19 chr10 14837962 14838121 -130751167 + L2 LINE L2 2221 2390 -924 258 295 72 47 chr10 14838200 14838478 -130750810 + L2 LINE L2 2583 2867 -447 228 146 42 0 chr10 14838608 14838656 -130750632 + L2 LINE L2 3004 3053 -219 22 0 0 0 chr10 14838776 14838798 -130750490 + AT_rich Low_complexity Low_complexity 1 22 0 3137 70 53 0 chr10 14838798 14839213 -130750075 - L1PA8 LINE L1 -13 6159 5723 317 24 24 0 chr10 14839326 14839368 -130749920 + (TGAA)n Simple_repeat Simple_repeat 1 43 0 905 244 166 28 chr10 14839607 14840035 -130749253 + MLT1D LTR MaLR 18 389 -1 597 256 12 0 chr10 14840201 14840365 -130748923 - MIR SINE MIR -16 246 81 514 246 142 24 chr10 14841400 14841611 -130747677 - MIR SINE MIR -12 250 15 835 150 0 0 chr10 14842983 14843103 -130746185 - AluSg/x SINE Alu -26 286 167 332 287 0 66 chr10 14843192 14843328 -130745960 - MIR SINE MIR -110 152 26 2370 109 0 3 chr10 14843469 14843782 -130745506 - AluSx SINE Alu 0 312 1 4105 89 13 2 chr10 14844557 14845105 -130744183 + MER41A LTR ERV1 1 554 0 1757 162 7 36 chr10 14845820 14846123 -130743165 - AluJo SINE Alu -18 294 1 1903 158 0 7 chr10 14846407 14846704 -130742584 + AluSx SINE Alu 9 303 -9 894 140 18 0 chr10 14846707 14846930 -130742358 + GA-rich Low_complexity Low_complexity 1 227 0 777 154 0 0 chr10 14846933 14847063 -130742225 - L1ME LINE L1 -714 5452 5323 349 172 12 68 chr10 14847063 14847226 -130742062 + GA-rich Low_complexity Low_complexity 4 157 0 255 298 53 0 chr10 14847313 14847407 -130741881 + MIR SINE MIR 120 218 -44 1017 154 10 51 chr10 14847629 14847824 -130741464 + AluSx SINE Alu 29 215 -97 17782 58 58 6 chr10 14847954 14850269 -130739019 + L1P LINE L1 3 2437 -3709 243 361 12 0 chr10 14850762 14850845 -130738443 - MIR SINE MIR -105 103 20 767 198 16 105 chr10 14853592 14853840 -130735448 - LTR12 LTR ERV1 -251 463 238 1677 190 19 3 chr10 14854226 14854537 -130734751 - MSTA LTR MaLR -112 316 1 8342 183 57 7 chr10 14854537 14856029 -130733259 - MSTA-int LTR MaLR 0 1651 75 1696 154 54 40 chr10 14856029 14856399 -130732889 + THE1C LTR MaLR 1 375 0 8342 183 57 7 chr10 14856399 14856478 -130732810 - MSTA-int LTR MaLR -1576 75 1 2358 163 17 22 chr10 14856478 14856883 -130732405 - MSTA LTR MaLR 0 428 26 576 360 51 25 chr10 14856893 14857363 -130731925 + ERVL LTR ERVL 2034 2515 -3249 596 167 4 224 chr10 14857400 14857663 -130731625 + L1MA9 LINE L1 5414 5618 -550 4098 152 18 24 chr10 14857763 14858551 -130730737 - L1MA2 LINE L1 -360 5944 5171 1806 168 30 3 chr10 14858551 14858848 -130730440 - AluSx SINE Alu -7 305 1 4098 152 18 24 chr10 14858848 14859300 -130729988 - L1MA2 LINE L1 -1133 5171 4718 3403 121 35 46 chr10 14859300 14859926 -130729362 + L1PB3 LINE L1 5534 6153 -1 773 247 6 11 chr10 14860123 14860327 -130728961 + MLT1F1 LTR MaLR 305 497 -45 1899 213 60 2 chr10 14860702 14861119 -130728169 - MER67C LTR ERV1 -63 647 207 1575 180 37 94 chr10 14861228 14861633 -130727655 + MLT1B LTR MaLR 7 388 -2 21 36 0 0 chr10 14861820 14861848 -130727440 + AT_rich Low_complexity Low_complexity 1 28 0 226 290 65 0 chr10 14862264 14862357 -130726931 + MIR SINE MIR 120 218 -44 2047 98 0 38 chr10 14862579 14862866 -130726422 + AluSx SINE Alu 29 304 -8 2130 168 19 3 chr10 14865444 14865874 -130723414 + L1MA9 LINE L1 5703 6161 -130 208 305 0 49 chr10 14865874 14865904 -130723384 + GA-rich Low_complexity Low_complexity 1 31 -47 1538 122 22 0 chr10 14865904 14866134 -130723154 + L1MA2 LINE L1 6070 6304 0 208 305 0 49 chr10 14866134 14866185 -130723103 + GA-rich Low_complexity Low_complexity 31 78 0 608 110 0 10 chr10 14866185 14866285 -130723003 + (GGGA)n Simple_repeat Simple_repeat 3 101 0 1035 92 0 0 chr10 14866285 14866426 -130722862 + L1MA9 LINE L1 6171 6311 -1 1115 186 39 10 chr10 14866489 14866693 -130722595 - MER6B DNA MER2_type 0 210 1 2223 106 0 37 chr10 14867158 14867479 -130721809 - AluSc SINE Alu 0 309 1 4236 97 13 2 chr10 14867648 14868195 -130721093 + MER41A LTR ERV1 2 554 0 4985 135 35 5 chr10 14868950 14869704 -130719584 - MER4E LTR ERV1 -3 776 1 4052 98 29 29 chr10 14870261 14870815 -130718473 + MER41A LTR ERV1 1 554 0 31 0 0 0 chr10 14871135 14871166 -130718122 + AT_rich Low_complexity Low_complexity 1 31 0 2609 37 7 0 chr10 14871481 14871778 -130717510 + L1PA3 LINE L1 5854 6152 -3 33 25 0 0 chr10 14871778 14871818 -130717470 + AT_rich Low_complexity Low_complexity 1 40 0 2857 212 30 58 chr10 14872315 14873177 -130716111 + L1MC4 LINE L1 7202 8039 -3 1773 288 36 23 chr10 14873885 14874288 -130715000 + L2 LINE L2 2312 2734 -579 2418 161 0 20 chr10 14874288 14874686 -130714602 - MLT1B LTR MaLR 0 390 1 1773 288 36 23 chr10 14874686 14875035 -130714253 + L2 LINE L2 2734 3077 -236 1614 171 84 10 chr10 14875050 14875359 -130713929 + MER61A LTR ERV1 1 332 -11 563 286 27 45 chr10 14875372 14875596 -130713692 + L2 LINE L2 3094 3313 0 21 0 0 0 chr10 14875849 14875870 -130713418 + AT_rich Low_complexity Low_complexity 1 21 0 2392 79 3 0 chr10 14875877 14876169 -130713119 + AluSp SINE Alu 3 295 -18 395 212 74 74 chr10 14876184 14876373 -130712915 - HAL1 LINE L1 0 2507 2319 391 228 26 61 chr10 14876386 14876500 -130712788 - MER104 DNA Tc2 -70 110 1 235 210 111 49 chr10 14877340 14877421 -130711867 - MLT1I LTR MaLR 0 409 324 302 195 85 14 chr10 14877568 14877665 -130711623 - MLT1J2 LTR MaLR -285 161 46 2623 40 0 3 chr10 14877687 14877990 -130711298 + AluY SINE Alu 1 302 -9 228 320 53 0 chr10 14878096 14878171 -130711117 + L2 LINE L2 3235 3313 0 408 324 7 14 chr10 14878174 14878313 -130710975 - MLT1L LTR MaLR -458 157 20 192 77 0 0 chr10 14878358 14878384 -130710904 + (TGGA)n Simple_repeat Simple_repeat 2 27 0 240 334 71 53 chr10 14878419 14878742 -130710546 + L2 LINE L2 2557 2885 -429 181 345 23 35 chr10 14878818 14878905 -130710383 + L2 LINE L2 3017 3102 -170 4117 109 11 0 chr10 14879037 14879585 -130709703 + MER41A LTR ERV1 1 554 0 210 191 24 0 chr10 14879663 14879705 -130709583 - L2 LINE L2 -5 3308 3266 263 239 9 101 chr10 14881652 14881761 -130707527 + L2 LINE L2 3215 3313 0 225 147 221 59 chr10 14881910 14881938 -130707350 + L1ME3 LINE L1 6054 6076 -86 279 71 0 0 chr10 14881938 14881980 -130707308 + (CA)n Simple_repeat Simple_repeat 2 43 0 225 147 221 59 chr10 14881980 14882019 -130707269 + L1ME3 LINE L1 6076 6132 -30 3008 176 51 7 chr10 14882774 14883347 -130705941 + L1MA4 LINE L1 5700 6297 -3 357 171 53 26 chr10 14884415 14884491 -130704797 - L1MA6 LINE L1 -7 6293 6216 602 236 44 35 chr10 14885034 14885244 -130704044 - MER20B DNA MER1_type -1 218 3 2676 146 53 5 chr10 14885636 14886048 -130703240 + MSTB1 LTR MaLR 1 432 0 551 314 36 32 chr10 14886235 14886483 -130702805 + L2 LINE L2 2930 3178 -135 531 217 47 16 chr10 14887108 14887237 -130702051 - L2 LINE L2 -6 3307 3175 2214 109 6 16 chr10 14887324 14887637 -130701651 + AluSx SINE Alu 1 310 -2 570 188 10 0 chr10 14889052 14889153 -130700135 - MER45A DNA AcHobo 0 178 77 1808 162 30 3 chr10 14889230 14889570 -130699718 - AluSx SINE Alu 0 348 1 370 98 0 0 chr10 14889946 14889997 -130699291 - MADE1 DNA Mariner 0 80 30 735 178 0 86 chr10 14890001 14890153 -130699135 + FRAM SINE Alu 20 158 -18 2069 119 0 53 chr10 14890242 14890560 -130698728 - AluSx SINE Alu -9 303 3 663 107 0 0 chr10 14891974 14892058 -130697230 + AluS SINE Alu 1 84 -229 434 91 197 0 chr10 14892667 14892733 -130696555 - MADE1 DNA Mariner -1 79 1 926 94 31 0 chr10 14892770 14892898 -130696390 + L1PA5 LINE L1 6017 6148 -6 264 59 0 0 chr10 14892995 14893029 -130696259 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 182 371 51 17 chr10 14893029 14893207 -130696081 - L2 LINE L2 -12 3301 3118 1848 127 0 80 chr10 14893344 14893682 -130695606 + AluSx SINE Alu 2 312 0 2970 234 170 25 chr10 14893694 14893840 -130695448 + L1ME LINE L1 3562 3686 -2460 1525 208 154 40 chr10 14893840 14894293 -130694995 + MLT1D LTR MaLR 1 505 0 2970 234 170 25 chr10 14894293 14895407 -130693881 + L1ME LINE L1 3686 5004 -1142 218 111 37 56 chr10 14895407 14895515 -130693773 + (TA)n Simple_repeat Simple_repeat 1 106 0 253 97 43 65 chr10 14895530 14895623 -130693665 + (TA)n Simple_repeat Simple_repeat 2 92 0 861 137 0 0 chr10 14895724 14895848 -130693440 + AluJb SINE Alu 1 124 -188 1025 195 0 0 chr10 14895921 14896090 -130693198 + AluJb SINE Alu 129 297 -15 805 255 69 31 chr10 14896091 14896509 -130692779 + L1ME LINE L1 5200 5637 -525 488 223 137 29 chr10 14896509 14896684 -130692604 - L1M4 LINE L1 -1876 4270 4077 673 283 123 35 chr10 14897088 14897853 -130691435 + L1ME LINE L1 4888 5729 -433 2167 102 0 14 chr10 14897969 14898294 -130690994 - AluSc SINE Alu 0 309 1 26 30 0 0 chr10 14898613 14898646 -130690642 + AT_rich Low_complexity Low_complexity 1 33 0 291 278 0 22 chr10 14900568 14900702 -130688586 + G-rich Low_complexity Low_complexity 1 131 0 496 328 6 6 chr10 14900932 14901112 -130688176 + (CA)n Simple_repeat Simple_repeat 1 180 0 301 308 8 23 chr10 14901082 14901212 -130688076 + (CATA)n Simple_repeat Simple_repeat 1 128 0 * 247 299 10 0 chr10 14901218 14901467 -130687821 + (CA)n Simple_repeat Simple_repeat 1 251 0 330 274 19 0 chr10 14901613 14901770 -130687518 + (CA)n Simple_repeat Simple_repeat 1 160 0 338 237 0 9 chr10 14901797 14901911 -130687377 + (CA)n Simple_repeat Simple_repeat 1 113 0 382 233 0 0 chr10 14902339 14902412 -130686876 + MER82 DNA MER2_type 14 86 -567 267 190 116 66 chr10 14902455 14902576 -130686712 - MIR3 SINE MIR -78 130 4 1063 110 12 13 chr10 14902914 14903096 -130686192 + L1P4 LINE L1 5346 5518 -646 * 2005 181 3 18 chr10 14903088 14903458 -130685830 + L1MA2 LINE L1 4885 5250 -896 2735 100 0 14 chr10 14903458 14903818 -130685470 + THE1A LTR MaLR 1 355 0 2005 181 3 18 chr10 14903818 14903839 -130685449 + L1MA2 LINE L1 5250 5270 -876 4885 107 14 17 chr10 14903975 14904698 -130684590 + L1MA2 LINE L1 5583 6303 -1 3463 50 29 7 chr10 14904714 14905135 -130684153 + L1PA8 LINE L1 5743 6172 0 214 333 0 0 chr10 14905544 14905601 -130683687 + L2 LINE L2 3254 3310 -3 234 175 35 0 chr10 14906767 14906824 -130682464 + L2 LINE L2 2561 2619 -695 731 197 34 48 chr10 14906862 14907070 -130682218 - MER96B DNA MER1_type? -21 396 192 2157 130 3 0 chr10 14907100 14907408 -130681880 - AluSx SINE Alu -3 309 1 667 199 28 39 chr10 14907867 14908048 -130681240 + MER96B DNA MER1_type? 192 370 -47 502 217 130 25 chr10 14907915 14908076 -130681212 - MER96B DNA MER1_type? -238 179 2 * 318 340 94 20 chr10 14908090 14908293 -130680995 + L2 LINE L2 2667 2884 -430 1834 258 4 37 chr10 14908441 14908903 -130680385 + LTR2 LTR ERV1 3 449 0 1608 196 48 18 chr10 14908906 14909243 -130680045 + MLT2C1 LTR ERVL 3 349 -48 387 60 0 0 chr10 14909308 14909358 -130679930 - MADE1 DNA Mariner -30 50 1 453 208 9 19 chr10 14909433 14909539 -130679749 + L2 LINE L2 3137 3241 -31 766 296 142 13 chr10 14909795 14910003 -130679285 + L2 LINE L2 2611 2791 -522 2387 122 30 25 chr10 14910003 14910364 -130678924 + THE1B LTR MaLR 1 363 -1 766 296 142 13 chr10 14910364 14910792 -130678496 + L2 LINE L2 2791 3312 -1 1795 169 3 17 chr10 14911314 14911609 -130677679 - AluJo SINE Alu -21 291 1 2128 135 3 0 chr10 14912220 14912524 -130676764 + AluSq SINE Alu 1 305 -8 206 345 53 0 chr10 14912669 14912782 -130676506 - L2 LINE L2 -1401 1913 1795 840 243 44 44 chr10 14913391 14913768 -130675520 + L1MEd LINE L1 2393 2759 -4806 442 282 30 79 chr10 14913926 14913966 -130675322 + MIR SINE MIR 2 42 -220 2674 118 14 16 chr10 14913966 14914331 -130674957 - THE1B LTR MaLR 0 364 1 442 282 30 79 chr10 14914331 14914533 -130674755 + MIR SINE MIR 42 232 -30 3070 113 19 9 chr10 14914533 14914957 -130674331 - MSTA LTR MaLR 0 428 1 442 282 30 79 chr10 14914957 14914979 -130674309 + MIR SINE MIR 232 254 -8 1973 116 0 8 chr10 14915516 14915783 -130673505 - AluSp SINE Alu -14 299 35 2256 102 0 7 chr10 14915899 14916192 -130673096 - AluSc SINE Alu -18 291 1 367 224 87 40 chr10 14916398 14916543 -130672745 + L1MEd LINE L1 2878 2999 -4566 1757 167 25 3 chr10 14916597 14916879 -130672409 - AluJb SINE Alu -22 290 3 455 235 159 72 chr10 14917187 14917361 -130671927 + L1ME4a LINE L1 5635 5792 -329 1966 126 19 50 chr10 14917361 14917679 -130671609 + AluSx SINE Alu 1 308 -4 455 235 159 72 chr10 14917679 14917951 -130671337 + L1ME4a LINE L1 5792 6120 -1 2174 93 4 0 chr10 14919384 14919662 -130669626 + AluSq SINE Alu 31 309 -4 200 271 0 0 chr10 14919705 14919753 -130669535 + (CA)n Simple_repeat Simple_repeat 1 48 0 272 286 71 50 chr10 14921658 14921700 -130667588 - MIR SINE MIR -118 144 104 1888 210 39 80 chr10 14921700 14922338 -130666950 + LTR9 LTR ERV1 1 612 0 272 286 71 50 chr10 14922338 14922435 -130666853 - MIR SINE MIR -158 104 2 1897 258 32 28 chr10 14922649 14923251 -130666037 + L1MD3 LINE L1 7380 7983 -12 2180 115 3 3 chr10 14923255 14923560 -130665728 - AluSg SINE Alu -5 305 1 1732 157 16 63 chr10 14923676 14924040 -130665248 + MER7A DNA MER2_type 1 345 -1 360 0 0 0 chr10 14924343 14924383 -130664905 + (CA)n Simple_repeat Simple_repeat 2 41 0 433 171 12 0 chr10 14925330 14925412 -130663876 - L1MB3 LINE L1 -7 6176 6094 273 204 204 38 chr10 14925416 14925512 -130663776 - MER5C DNA MER1_type -68 256 177 1956 137 0 11 chr10 14925512 14925817 -130663471 + AluSx SINE Alu 1 302 0 273 204 204 38 chr10 14925817 14925905 -130663383 - MER5C DNA MER1_type -147 177 40 432 226 120 69 chr10 14926195 14926317 -130662971 + MLT1F LTR MaLR 1 115 -440 2335 112 0 0 chr10 14926317 14926622 -130662666 + AluSx SINE Alu 1 305 -7 432 226 120 69 chr10 14926622 14926749 -130662539 + MLT1F LTR MaLR 115 262 -293 203 250 0 0 chr10 14926768 14926820 -130662468 + GA-rich Low_complexity Low_complexity 2 53 0 395 257 28 18 chr10 14926830 14926939 -130662349 + MLT1F LTR MaLR 393 502 -88 2028 164 33 39 chr10 14926945 14927276 -130662012 + MLT1B LTR MaLR 3 333 -57 3692 120 0 15 chr10 14927276 14927808 -130661480 + MER1A DNA MER1_type 1 524 -3 2028 164 33 39 chr10 14927808 14927866 -130661422 + MLT1B LTR MaLR 333 390 0 390 127 0 76 chr10 14927868 14927947 -130661341 + MLT1G1 LTR MaLR 494 588 -1 1161 172 39 10 chr10 14929170 14929374 -130659914 + AluJb SINE Alu 1 210 -102 201 176 0 0 chr10 14929396 14929430 -130659858 + A-rich Low_complexity Low_complexity 1 34 0 370 309 164 30 chr10 14929677 14929981 -130659307 + MER115 DNA AcHobo 3 347 -346 924 132 23 40 chr10 14931098 14931272 -130658016 + FRAM SINE Alu 6 176 0 1277 142 19 69 chr10 14931324 14931551 -130657737 - THE1C LTR MaLR 0 375 161 2048 123 7 29 chr10 14931551 14931859 -130657429 + AluSx SINE Alu 1 301 -11 1277 142 19 69 chr10 14931859 14931892 -130657396 - THE1C LTR MaLR -214 161 128 274 330 215 0 chr10 14932335 14932544 -130656744 - MIR SINE MIR -3 259 6 2200 111 16 7 chr10 14934083 14934264 -130655024 - AluSx SINE Alu 0 312 125 2148 113 3 25 chr10 14934264 14934583 -130654705 - AluSx SINE Alu 0 312 1 2200 111 16 7 chr10 14934583 14934707 -130654581 - AluSx SINE Alu -187 125 4 1507 143 52 45 chr10 14934954 14935241 -130654047 - AluJo SINE Alu -23 289 1 923 247 92 32 chr10 14935242 14935622 -130653666 - L2 LINE L2 -7 3306 2904 255 264 100 45 chr10 14935622 14935732 -130653556 - MARNA DNA Mariner -26 560 445 2284 182 6 34 chr10 14936287 14936759 -130652529 + MER65C LTR ERV1 2 460 -1 5453 146 21 12 chr10 14937452 14938369 -130650919 - L1MC1 LINE L1 -6 6327 5403 254 268 165 0 chr10 14938499 14938596 -130650692 - L2 LINE L2 0 3272 3160 291 371 86 0 chr10 14938688 14938885 -130650403 + L2 LINE L2 2943 3156 -157 2020 184 93 18 chr10 14938983 14939435 -130649853 - MER66B LTR ERV1 0 486 1 1689 255 88 21 chr10 14939435 14939983 -130649305 - HsTC2 DNA Tc2 -1310 588 1 269 246 44 79 chr10 14939995 14940109 -130649179 + L2 LINE L2 3171 3280 -33 274 214 67 22 chr10 14940117 14940206 -130649082 + HsTC2 DNA Tc2 360 452 -1446 * 3382 139 6 19 chr10 14940190 14940561 -130648727 + MER49 LTR ERV1 26 389 -534 2347 85 0 0 chr10 14940561 14940856 -130648432 + AluSq SINE Alu 1 295 -18 3382 139 6 19 chr10 14940856 14941016 -130648272 + MER49 LTR ERV1 389 550 -373 309 151 0 0 chr10 14941034 14941087 -130648201 + GA-rich Low_complexity Low_complexity 4 56 0 1249 180 69 114 chr10 14941138 14941523 -130647765 + MER49 LTR ERV1 334 923 0 640 157 26 13 chr10 14941905 14942058 -130647230 + GA-rich Low_complexity Low_complexity 3 157 0 218 237 32 75 chr10 14942930 14943023 -130646265 - L2 LINE L2 -6 3266 3178 316 179 18 0 chr10 14944050 14944106 -130645182 + MLT1E2 LTR MaLR 219 275 -351 428 123 14 0 chr10 14944137 14944210 -130645078 + (CA)n Simple_repeat Simple_repeat 1 74 0 1206 211 68 4 chr10 14944216 14944327 -130644961 + MLT1E2 LTR MaLR 344 446 -180 183 42 0 0 chr10 14944327 14944351 -130644937 + (CAGCC)n Simple_repeat Simple_repeat 1 24 0 1206 211 68 4 chr10 14944351 14944505 -130644783 + MLT1E2 LTR MaLR 446 626 0 2332 115 0 0 chr10 14944510 14944822 -130644466 + AluSx SINE Alu 1 312 0 782 285 35 22 chr10 14944842 14945211 -130644077 - L1ME LINE L1 -528 5636 5263 789 295 128 19 chr10 14945219 14945717 -130643571 - L1ME LINE L1 -1001 5145 4570 378 42 0 0 chr10 14945717 14945765 -130643523 + (CA)n Simple_repeat Simple_repeat 2 49 0 789 295 128 19 chr10 14945765 14945860 -130643428 - L1ME LINE L1 -1576 4570 4487 27 0 0 0 chr10 14946059 14946086 -130643202 + AT_rich Low_complexity Low_complexity 1 27 0 1166 231 33 18 chr10 14946086 14946419 -130642869 - L1MA9 LINE L1 -38 6274 5937 319 75 57 0 chr10 14946448 14946501 -130642787 - L1MC2 LINE L1 0 6344 6289 1628 271 54 57 chr10 14946518 14946776 -130642512 - L1ME LINE L1 -1776 4370 4113 1732 165 33 3 chr10 14946776 14947079 -130642209 + AluJb SINE Alu 1 312 0 1628 271 54 57 chr10 14947079 14947729 -130641559 - L1ME LINE L1 -2033 4113 3465 233 234 0 0 chr10 14948293 14948340 -130640948 - L3 LINE CR1 -4 1573 1527 4489 78 19 0 chr10 14948613 14949196 -130640092 + L1PA10 LINE L1 5556 6152 -16 188 57 0 57 chr10 14949196 14949231 -130640057 + (TTAAA)n Simple_repeat Simple_repeat 3 35 0 196 236 28 28 chr10 14949742 14949814 -130639474 + MIR3 SINE MIR 2 73 -135 846 50 0 0 chr10 14949814 14949915 -130639373 - AluY SINE Alu -7 304 204 441 262 89 48 chr10 14949915 14950083 -130639205 + MIR SINE MIR 67 241 -21 208 239 0 0 chr10 14950341 14950387 -130638901 + (TG)n Simple_repeat Simple_repeat 1 46 0 228 132 57 94 chr10 14950778 14950831 -130638457 - AluJo SINE Alu -166 136 86 1292 157 0 68 chr10 14950831 14951067 -130638221 - AluJo SINE Alu -92 220 1 267 67 0 67 chr10 14951614 14951659 -130637629 - L2 LINE L2 -6 3307 3266 2386 72 0 26 chr10 14951944 14952248 -130637040 + AluSq SINE Alu 1 296 -17 498 291 58 54 chr10 14952482 14952530 -130636758 - MIR SINE MIR -1 261 215 1865 137 3 14 chr10 14952530 14952814 -130636474 - AluJb SINE Alu -20 292 12 498 291 58 54 chr10 14952814 14952879 -130636409 - MIR SINE MIR -47 215 152 2048 157 0 0 chr10 14952879 14953184 -130636104 - AluSx SINE Alu -7 305 1 498 291 58 54 chr10 14953184 14953310 -130635978 - MIR SINE MIR -110 152 20 21 0 0 0 chr10 14955053 14955074 -130634214 + AT_rich Low_complexity Low_complexity 1 21 0 5429 152 38 95 chr10 14955687 14956331 -130632957 - L1 LINE L1 -1535 4611 3932 282 216 20 0 chr10 14956331 14956382 -130632906 - MER66A LTR ERV1 -140 338 287 5429 152 38 95 chr10 14956382 14956829 -130632459 - L1 LINE L1 -2214 3932 3552 1211 159 195 16 chr10 14956829 14957080 -130632208 - AluJo SINE Alu -16 296 1 5429 152 38 95 chr10 14957080 14957250 -130632038 - L1 LINE L1 -2594 3552 3374 346 336 0 9 chr10 14957546 14957653 -130631635 + MIR SINE MIR 1 106 -156 * 384 302 79 0 chr10 14957648 14957787 -130631501 - L2 LINE L2 0 3313 3164 603 323 142 6 chr10 14957973 14958459 -130630829 - L2 LINE L2 -412 2902 2351 1411 193 39 8 chr10 14958460 14958719 -130630569 + Tigger7 DNA MER2_type 1 267 -2220 574 182 10 0 chr10 14958716 14958815 -130630473 + Tigger7 DNA MER2_type 2388 2487 0 * 362 341 0 0 chr10 14958815 14958953 -130630335 + MIR SINE MIR 101 238 -24 272 319 22 11 chr10 14959089 14959180 -130630108 + L2 LINE L2 3134 3225 -47 2281 103 0 7 chr10 14960203 14960505 -130628783 - AluSx SINE Alu -12 300 1 1753 147 35 0 chr10 14961536 14961821 -130627467 + AluJb SINE Alu 1 295 -17 264 250 47 61 chr10 14961878 14962026 -130627262 - L1ME4a LINE L1 -96 6025 5880 245 202 34 67 chr10 14962214 14962303 -130626985 - L1MA5 LINE L1 0 6300 6215 315 241 83 88 chr10 14962314 14962433 -130626855 - L1ME4a LINE L1 -303 5818 5699 628 163 0 131 chr10 14962433 14962586 -130626702 - FLAM_A SINE Alu 0 133 1 315 241 83 88 chr10 14962586 14962694 -130626594 - L1ME4a LINE L1 -422 5699 5592 2000 230 27 19 chr10 14962698 14963374 -130625914 - L1MB7 LINE L1 -321 5863 5307 407 368 76 21 chr10 14963468 14963889 -130625399 - L1MB7 LINE L1 -978 5168 4725 237 176 122 137 chr10 14964044 14964175 -130625113 + L1MC4 LINE L1 6700 6828 -1214 189 0 0 0 chr10 14964203 14964224 -130625064 + (A)n Simple_repeat Simple_repeat 1 21 0 1876 145 0 39 chr10 14964650 14964961 -130624327 + AluJb SINE Alu 1 299 -13 4185 27 0 0 chr10 14965564 14966051 -130623237 - L1PA3 LINE L1 -2066 4080 3594 11108 30 0 2 chr10 14966046 14968120 -130621168 + L1PA3 LINE L1 4086 6152 -3 1706 165 29 0 chr10 14968188 14968467 -130620821 + AluJo SINE Alu 1 287 -25 628 262 147 39 chr10 14968778 14968914 -130620374 + L1MC4 LINE L1 6459 6579 -1463 2347 105 0 7 chr10 14968914 14969218 -130620070 - AluSx SINE Alu -10 302 1 628 262 147 39 chr10 14969218 14969360 -130619928 + L1MC4 LINE L1 6579 6767 -1275 387 0 0 0 chr10 14969711 14969754 -130619534 + (CA)n Simple_repeat Simple_repeat 2 44 0 258 32 0 0 chr10 14969753 14969784 -130619504 + (GA)n Simple_repeat Simple_repeat 2 32 0 * 308 358 80 6 chr10 14969817 14969993 -130619295 - MARNA DNA Mariner -91 495 307 221 283 0 0 chr10 14974229 14974289 -130614999 - L2 LINE L2 0 3272 3213 2423 80 0 7 chr10 14974417 14974716 -130614572 - AluSg SINE Alu -13 297 1 1051 146 12 0 chr10 14975870 14976034 -130613254 - AluJb SINE Alu -11 301 136 2175 120 0 3 chr10 14976037 14976345 -130612943 - AluSq SINE Alu -6 307 1 634 272 50 29 chr10 14977664 14977903 -130611385 - L1ME LINE L1 -355 5766 5523 2186 94 0 23 chr10 14978179 14978478 -130610810 - AluSx SINE Alu -20 292 1 2527 68 0 0 chr10 14978843 14979139 -130610149 - AluY SINE Alu -15 296 1 250 318 65 56 chr10 14980120 14980177 -130609111 - MIR SINE MIR -19 243 188 2310 114 0 0 chr10 14980177 14980484 -130608804 - AluSx SINE Alu -5 307 1 250 318 65 56 chr10 14980484 14980640 -130608648 - MIR SINE MIR -74 188 28 290 200 17 23 chr10 14980953 14981043 -130608245 - MIR3 SINE MIR -24 184 96 305 321 83 24 chr10 14982973 14983225 -130606063 + LTR34 LTR ERV1 269 535 -164 1777 150 9 38 chr10 14983240 14983560 -130605728 + AluJo SINE Alu 1 311 -1 1954 137 30 3 chr10 14983562 14983861 -130605427 + AluSx SINE Alu 1 307 -5 235 135 0 96 chr10 14983926 14983978 -130605310 + LTR23 LTR ERV1 342 388 -49 244 270 22 45 chr10 14984220 14984309 -130604979 + L2 LINE L2 3005 3091 -222 949 299 169 8 chr10 14984901 14985492 -130603796 - L2 LINE L2 -341 2973 2288 199 303 45 0 chr10 14987242 14987308 -130601980 + MIR SINE MIR 76 144 -64 292 296 117 52 chr10 14989393 14989560 -130599728 + MIR SINE MIR 18 205 -57 2359 81 10 3 chr10 14989560 14989856 -130599432 + AluSc SINE Alu 2 299 -10 292 296 117 52 chr10 14989856 14989918 -130599370 + MIR SINE MIR 205 262 0 1589 235 46 28 chr10 14990250 14990709 -130598579 + L1ME3A LINE L1 5678 6144 -26 263 332 63 38 chr10 14990813 14991051 -130598237 + MIR SINE MIR 5 248 -14 216 279 77 19 chr10 14992823 14992927 -130596361 - L2 LINE L2 -19 3294 3185 1877 120 13 57 chr10 14993976 14994292 -130594996 + AluSx SINE Alu 1 302 -10 21 0 0 0 chr10 14995691 14995712 -130593576 + AT_rich Low_complexity Low_complexity 1 21 0 678 241 101 51 chr10 14996543 14996830 -130592458 + L1M4 LINE L1 5521 5822 -356 392 266 108 0 chr10 14996942 14997081 -130592207 + MER5A DNA MER1_type 3 156 -33 505 222 90 36 chr10 14997081 14997248 -130592040 - MIR SINE MIR -82 180 5 402 197 9 125 chr10 14998113 14998287 -130591001 - MIR3 SINE MIR -17 191 34 771 281 79 34 chr10 14998886 14999239 -130590049 + MER90 LTR ERV1 246 614 0 202 175 50 0 chr10 14999316 14999356 -130589932 + MIR SINE MIR 103 144 -64 947 166 186 0 chr10 14999481 14999680 -130589608 - MER46A DNA MER2_type 0 236 1 276 152 45 15 chr10 15000652 15000718 -130588570 - MLT1L LTR MaLR -350 265 198 222 118 0 0 chr10 15000816 15000850 -130588438 + (CA)n Simple_repeat Simple_repeat 2 35 0 1663 126 66 102 chr10 15000851 15001232 -130588056 + MLT1A2 LTR MaLR 8 374 0 216 0 0 0 chr10 15003181 15003205 -130586083 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1822 83 13 0 chr10 15003217 15003447 -130585841 - AluSq SINE Alu -80 233 1 424 249 46 83 chr10 15004439 15004557 -130584731 + MER112 DNA MER1_type 51 159 -101 1734 141 61 7 chr10 15004557 15004834 -130584454 + AluSx SINE Alu 1 292 -20 424 249 46 83 chr10 15004834 15004932 -130584356 + MER112 DNA MER1_type 159 259 -1 269 220 30 100 chr10 15005853 15005953 -130583335 - MIR SINE MIR -139 123 31 288 0 0 0 chr10 15007897 15007929 -130581359 + (CA)n Simple_repeat Simple_repeat 2 33 0 260 256 52 59 chr10 15008839 15009039 -130580249 + L2 LINE L2 2776 2973 -299 467 286 82 15 chr10 15009649 15009855 -130579433 - MIR SINE MIR -10 252 33 339 272 0 0 chr10 15010191 15010316 -130578972 + (CA)n Simple_repeat Simple_repeat 1 125 0 243 208 0 19 chr10 15011054 15011107 -130578181 - MER5B DNA MER1_type -2 176 125 2161 61 41 41 chr10 15011575 15011870 -130577418 - AluY SINE Alu -16 295 1 688 274 117 6 chr10 15013149 15013499 -130575789 - L2 LINE L2 -3 3310 2922 2264 112 0 3 chr10 15013783 15014087 -130575201 - AluSx SINE Alu -9 303 1 332 228 158 0 chr10 15015281 15015408 -130573880 - L1ME4a LINE L1 0 6121 5975 244 216 167 29 chr10 15015470 15015572 -130573716 - L1ME4a LINE L1 -251 5870 5755 2217 159 39 127 chr10 15015576 15016223 -130573065 + Charlie1 DNA MER1_type 2168 2757 -4 30 27 0 0 chr10 15016534 15016571 -130572717 + AT_rich Low_complexity Low_complexity 1 37 0 880 131 0 0 chr10 15016969 15017091 -130572197 + FLAM_A SINE Alu 1 122 -11 293 185 104 111 chr10 15017133 15017268 -130572020 - L2 LINE L2 0 3313 3180 850 182 79 0 chr10 15018015 15018180 -130571108 + MER45A DNA AcHobo 1 178 0 440 83 17 0 chr10 15018320 15018380 -130570908 + MLT1E LTR MaLR 92 152 -441 1045 251 18 11 chr10 15018436 15018715 -130570573 + MLT1E LTR MaLR 313 593 0 2313 70 0 7 chr10 15018900 15019218 -130570070 + AluY SINE Alu 1 316 0 194 289 105 67 chr10 15019393 15019632 -130569656 - L2 LINE L2 -1926 1388 1141 324 163 0 0 chr10 15019895 15019944 -130569344 - MER81 DNA DNA -36 78 30 183 197 49 16 chr10 15020010 15020071 -130569217 - MER5B DNA MER1_type -3 175 113 220 309 124 14 chr10 15020078 15020360 -130568928 - L2 LINE L2 -2666 648 336 214 262 0 0 chr10 15021424 15021466 -130567822 + (CATG)n Simple_repeat Simple_repeat 3 44 0 336 24 0 0 chr10 15022260 15022301 -130566987 + (TG)n Simple_repeat Simple_repeat 1 41 0 2249 119 0 0 chr10 15022550 15022845 -130566443 + AluSx SINE Alu 1 295 -17 1400 172 92 43 chr10 15022989 15023337 -130565951 - MLT1A1 LTR MaLR 0 365 1 916 165 95 0 chr10 15024610 15024768 -130564520 + FAM SINE Alu 3 175 0 246 171 26 13 chr10 15024770 15024846 -130564442 + (TA)n Simple_repeat Simple_repeat 1 77 0 233 200 27 67 chr10 15024871 15024946 -130564342 + MIR SINE MIR 42 113 -95 1519 128 210 55 chr10 15025212 15025475 -130563813 + MSTD LTR MaLR 1 331 -65 1682 137 40 57 chr10 15025475 15025775 -130563513 + AluSq SINE Alu 1 295 -18 1519 128 210 55 chr10 15025775 15025854 -130563434 + MSTD LTR MaLR 331 396 0 2229 121 3 0 chr10 15027228 15027533 -130561755 - AluSx SINE Alu -6 306 1 233 271 135 0 chr10 15027687 15027783 -130561505 + MER112 DNA MER1_type 6 114 -146 1829 157 32 23 chr10 15027871 15028216 -130561072 + L1MB3 LINE L1 5748 6095 -88 2005 125 0 0 chr10 15028277 15028583 -130560705 + AluSg SINE Alu 1 306 0 1902 140 21 0 chr10 15031786 15032065 -130557223 + AluSx SINE Alu 13 297 -15 2290 96 0 3 chr10 15032108 15032400 -130556888 + AluY SINE Alu 1 291 -20 209 261 8 67 chr10 15033305 15033424 -130555864 - L2 LINE L2 -329 2943 2832 1662 193 0 22 chr10 15033649 15033965 -130555323 + AluJo SINE Alu 1 309 -3 2478 83 0 3 chr10 15034395 15034707 -130554581 - AluY SINE Alu 0 311 1 240 271 271 8 chr10 15034783 15034835 -130554453 - MIR SINE MIR -87 175 138 2249 122 0 3 chr10 15034835 15035147 -130554141 + AluSx SINE Alu 2 312 0 240 271 271 8 chr10 15035147 15035212 -130554076 - MIR SINE MIR -124 138 27 4577 94 8 17 chr10 15036680 15037320 -130551968 + MER51A LTR ERV1 1 634 0 231 319 118 0 chr10 15037860 15037979 -130551309 + MER94 DNA DNA 1 133 -1 1700 173 33 36 chr10 15038428 15038793 -130550495 + MLT1A1 LTR MaLR 2 365 0 268 295 129 0 chr10 15039818 15039957 -130549331 + MIR3 SINE MIR 42 198 -10 2154 120 27 0 chr10 15040930 15041231 -130548057 + AluSx SINE Alu 1 309 -3 1207 107 0 11 chr10 15041676 15041854 -130547434 + L1PA8 LINE L1 5989 6164 -8 408 267 30 15 chr10 15041909 15042040 -130547248 + MIR SINE MIR 81 213 -49 389 306 50 0 chr10 15042083 15042204 -130547084 + MIR3 SINE MIR 41 167 -41 2259 106 0 22 chr10 15042730 15043042 -130546246 + AluSp SINE Alu 1 305 -8 274 258 22 0 chr10 15043580 15043675 -130545613 + L1MC4 LINE L1 7074 7255 -633 529 235 84 67 chr10 15043796 15044081 -130545207 + L1MC5 LINE L1 7287 7576 -385 36 23 0 0 chr10 15045159 15045202 -130544086 + AT_rich Low_complexity Low_complexity 1 43 0 1815 111 67 54 chr10 15045445 15045743 -130543545 + AluSq SINE Alu 1 302 -11 1593 157 60 17 chr10 15046263 15046562 -130542726 + AluJo SINE Alu 1 312 0 200 292 0 0 chr10 15046831 15046879 -130542409 + MIR SINE MIR 215 262 0 513 269 195 21 chr10 15046994 15047276 -130542012 + L1MB7 LINE L1 5843 6173 -11 334 287 52 52 chr10 15047376 15047453 -130541835 + MIR SINE MIR 13 89 -173 1609 103 5 0 chr10 15047453 15047667 -130541621 - AluSg/x SINE Alu -9 303 89 334 287 52 52 chr10 15047667 15047763 -130541525 + MIR SINE MIR 88 186 -76 244 250 45 45 chr10 15047764 15047896 -130541392 + L2 LINE L2 2376 2507 -807 554 241 156 71 chr10 15048064 15048513 -130540775 + L2 LINE L2 2826 3312 -1 252 261 43 22 chr10 15048919 15049011 -130540277 - MIR SINE MIR -87 175 82 2336 97 3 7 chr10 15049697 15050005 -130539283 + AluSx SINE Alu 1 307 -5 1403 226 26 0 chr10 15050014 15050324 -130538964 - L1 LINE L1 -797 5349 5032 1947 199 35 9 chr10 15050324 15050750 -130538538 + L1MB1 LINE L1 5729 6165 -3 182 279 16 0 chr10 15050879 15050940 -130538348 - MIR SINE MIR -124 138 77 892 125 0 0 chr10 15051552 15051672 -130537616 + FLAM_C SINE Alu 1 120 -23 1580 183 3 7 chr10 15052682 15052972 -130536316 - AluJo SINE Alu -23 289 1 760 177 8 0 chr10 15052973 15053097 -130536191 - AluJo/FLAM SINE Alu -186 126 2 197 254 73 0 chr10 15053142 15053197 -130536091 + L2 LINE L2 3209 3267 -5 180 0 0 0 chr10 15053954 15053974 -130535314 + (TGAA)n Simple_repeat Simple_repeat 4 23 0 318 26 0 0 chr10 15055031 15055070 -130534218 + (CA)n Simple_repeat Simple_repeat 1 39 0 442 228 6 11 chr10 15055475 15055655 -130533633 + CT-rich Low_complexity Low_complexity 2 180 0 796 151 78 50 chr10 15057220 15057399 -130531889 + MLT1B LTR MaLR 1 184 -206 200 119 0 48 chr10 15057403 15057445 -130531843 + (TCCC)n Simple_repeat Simple_repeat 1 40 0 1083 195 10 5 chr10 15057479 15057679 -130531609 + MLT1B LTR MaLR 188 388 -2 215 288 0 41 chr10 15058213 15058286 -130531002 + L2 LINE L2 3201 3270 -2 987 235 76 90 chr10 15059065 15059619 -130529669 - MLT1H LTR MaLR 0 549 4 2655 192 46 38 chr10 15059915 15060524 -130528764 - MLT1E3 LTR MaLR 0 624 11 2453 86 0 0 chr10 15060793 15061094 -130528194 + AluY SINE Alu 1 301 -10 405 0 0 0 chr10 15062216 15062261 -130527027 + (TA)n Simple_repeat Simple_repeat 2 46 0 609 242 112 51 chr10 15062402 15062617 -130526671 - MLT1E3 LTR MaLR -67 557 330 214 268 16 0 chr10 15062623 15062746 -130526542 + (TA)n Simple_repeat Simple_repeat 1 125 0 289 274 91 16 chr10 15063500 15063686 -130525602 + L1M4 LINE L1 3249 3448 -2698 2156 135 0 6 chr10 15063692 15064003 -130525285 - AluSx SINE Alu -3 309 1 2204 108 0 0 chr10 15064580 15064876 -130524412 + AluSx SINE Alu 1 296 -16 752 236 186 92 chr10 15064982 15065122 -130524166 - L2 LINE L2 -1080 2234 2109 2348 102 0 13 chr10 15065122 15065427 -130523861 + AluSx SINE Alu 1 301 -11 752 236 186 92 chr10 15065427 15065779 -130523509 - L2 LINE L2 -1205 2109 1682 2255 128 0 0 chr10 15065779 15066077 -130523211 + AluSx SINE Alu 2 299 -13 752 236 186 92 chr10 15066077 15066138 -130523150 - L2 LINE L2 -1632 1682 1628 337 325 60 40 chr10 15066186 15066386 -130522902 + L2 LINE L2 2865 3068 -204 24 32 0 0 chr10 15066661 15066692 -130522596 + AT_rich Low_complexity Low_complexity 1 31 0 25 0 0 0 chr10 15066855 15066880 -130522408 + AT_rich Low_complexity Low_complexity 1 25 0 1841 156 20 7 chr10 15067372 15067673 -130521615 + AluJb SINE Alu 1 305 -7 292 336 7 18 chr10 15067673 15067878 -130521410 + GA-rich Low_complexity Low_complexity 1 202 0 508 181 0 0 chr10 15068548 15068631 -130520657 + AluSc SINE Alu 141 223 -86 3284 215 80 38 chr10 15068652 15069181 -130520107 - L1ME1 LINE L1 -6 6160 5655 1684 175 46 117 chr10 15069181 15069286 -130520002 + MLT1C LTR MaLR 1 112 -355 1983 138 7 0 chr10 15069286 15069575 -130519713 + AluSx SINE Alu 1 291 -21 1684 175 46 117 chr10 15069575 15069967 -130519321 + MLT1C LTR MaLR 112 463 -4 3284 215 80 38 chr10 15069967 15070741 -130518547 - L1ME1 LINE L1 -511 5655 4915 2540 65 3 0 chr10 15070741 15071048 -130518240 - AluSc SINE Alu -1 308 1 3284 215 80 38 chr10 15071048 15071265 -130518023 - L1ME1 LINE L1 -1251 4915 4709 2102 64 0 0 chr10 15071265 15071516 -130517772 - L1PA7 LINE L1 -2 6152 5902 3284 215 80 38 chr10 15071516 15071886 -130517402 - L1ME1 LINE L1 -1457 4709 4187 453 307 60 60 chr10 15072852 15073040 -130516248 - L2 LINE L2 -4 3268 3078 2267 78 4 0 chr10 15073040 15073321 -130515967 - AluSg SINE Alu -13 297 16 453 307 60 60 chr10 15073321 15073383 -130515905 - L2 LINE L2 -193 3079 3018 2019 119 4 0 chr10 15074279 15074557 -130514731 + AluSx SINE Alu 7 285 -27 1699 148 4 4 chr10 15075111 15075375 -130513913 + AluSx SINE Alu 29 292 -20 2242 110 7 3 chr10 15075672 15075971 -130513317 + AluSx SINE Alu 1 300 -12 297 75 0 0 chr10 15075979 15076019 -130513269 + (TG)n Simple_repeat Simple_repeat 2 41 0 2225 43 0 0 chr10 15077229 15077483 -130511805 - AluY SINE Alu -8 303 50 1753 164 13 10 chr10 15078221 15078520 -130510768 + AluJo SINE Alu 1 300 -12 2412 85 3 7 chr10 15078842 15079147 -130510141 - AluSq SINE Alu -9 304 1 882 130 0 0 chr10 15079490 15079613 -130509675 + AluJ SINE Alu 11 133 -179 24 0 0 0 chr10 15079817 15079841 -130509447 + AT_rich Low_complexity Low_complexity 1 24 0 737 73 60 23 chr10 15079914 15080252 -130509036 + (TA)n Simple_repeat Simple_repeat 1 350 0 2283 76 3 3 chr10 15080252 15080541 -130508747 - AluY SINE Alu -22 289 1 30 27 0 0 chr10 15080542 15080579 -130508709 + AT_rich Low_complexity Low_complexity 1 37 0 553 168 74 108 chr10 15081283 15081486 -130507802 + AluJo SINE Alu 13 208 -104 731 223 11 40 chr10 15081895 15082070 -130507218 + AluJ SINE Alu 118 287 -25 529 285 24 6 chr10 15083005 15083170 -130506118 - MER45A DNA AcHobo 0 178 11 2263 93 3 26 chr10 15083232 15083545 -130505743 + AluSx SINE Alu 1 306 -6 2396 79 0 3 chr10 15083546 15083850 -130505438 + AluY SINE Alu 2 304 -7 2260 108 14 0 chr10 15084133 15084428 -130504860 + AluSx SINE Alu 1 299 -13 25 31 0 0 chr10 15084748 15084780 -130504508 + AT_rich Low_complexity Low_complexity 1 32 0 2308 89 0 13 chr10 15085331 15085635 -130503653 + AluY SINE Alu 1 300 -11 548 194 144 94 chr10 15085751 15085952 -130503336 + L1ME LINE L1 6 216 -5854 2104 120 7 7 chr10 15086025 15086333 -130502955 + AluSx SINE Alu 1 308 -4 216 158 0 0 chr10 15086333 15086371 -130502917 + GA-rich Low_complexity Low_complexity 1 38 0 567 304 12 41 chr10 15086386 15086629 -130502659 + L1ME LINE L1 260 495 -5575 2215 127 0 0 chr10 15086841 15087148 -130502140 - AluSx SINE Alu -5 307 1 2178 134 0 0 chr10 15087443 15087750 -130501538 - AluSx SINE Alu -5 307 1 219 88 0 0 chr10 15088129 15088163 -130501125 + (GA)n Simple_repeat Simple_repeat 1 34 0 897 163 18 24 chr10 15088354 15088520 -130500768 - MLT1B LTR MaLR -205 185 21 1258 311 92 38 chr10 15088581 15089046 -130500242 - L1MEd LINE L1 -5333 786 265 1993 204 127 54 chr10 15089046 15089171 -130500117 + MLT1E LTR MaLR 1 116 -477 1644 173 10 33 chr10 15089171 15089472 -130499816 + AluJb SINE Alu 1 294 -18 1993 204 127 54 chr10 15089472 15089899 -130499389 + MLT1E LTR MaLR 116 593 0 1258 311 92 38 chr10 15089899 15090175 -130499113 - L1MEd LINE L1 -5854 265 5 1755 174 0 10 chr10 15090729 15091017 -130498271 + AluJb SINE Alu 3 287 -25 248 273 34 68 chr10 15091041 15091129 -130498159 + L2 LINE L2 3005 3089 -183 209 338 137 24 chr10 15091480 15091794 -130497494 + L2 LINE L2 2715 3058 -214 748 277 119 13 chr10 15091889 15092124 -130497164 - MIR SINE MIR -1 261 2 364 257 83 42 chr10 15092489 15092633 -130496655 - MIR3 SINE MIR -10 198 49 1589 180 33 91 chr10 15093239 15093634 -130495654 - MLT1A2 LTR MaLR -2 372 1 3089 230 60 68 chr10 15093640 15094877 -130494411 - MLT1A2-int LTR MaLR -7 1364 5 1393 232 126 69 chr10 15094881 15095229 -130494059 - MLT2B1 LTR ERVL 0 520 134 2149 137 0 0 chr10 15095229 15095528 -130493760 - AluSx SINE Alu -13 299 1 1393 232 126 69 chr10 15095528 15095671 -130493617 - MLT2B1 LTR ERVL -386 134 1 357 221 124 138 chr10 15096021 15096238 -130493050 - MIR SINE MIR -1 261 48 267 377 11 2 chr10 15096361 15096478 -130492810 + MIR SINE MIR 32 147 -64 4111 117 35 2 chr10 15098008 15098599 -130490689 - L1PB3 LINE L1 0 6154 5544 2529 77 0 3 chr10 15098600 15098912 -130490376 - AluY SINE Alu 0 311 1 204 98 0 176 chr10 15098983 15099034 -130490254 + L2 LINE L2 3272 3313 0 2174 104 0 0 chr10 15099217 15099523 -130489765 + AluSg SINE Alu 3 308 0 1599 167 11 0 chr10 15099830 15100117 -130489171 + L1 LINE L1 4629 4918 -1228 447 133 4 0 chr10 15100169 15100248 -130489040 - L1PB3 LINE L1 -677 5479 5399 640 170 30 10 chr10 15100256 15100408 -130488880 + L1MD3 LINE L1 6857 7041 -793 882 249 4 0 chr10 15100914 15101139 -130488149 + L1M4 LINE L1 2650 2875 -3271 1231 237 125 24 chr10 15101244 15101661 -130487627 - MLT1C LTR MaLR -8 459 1 2175 213 101 9 chr10 15101661 15102336 -130486952 + L1M4 LINE L1 943 1679 -4863 22 0 0 0 chr10 15103137 15103159 -130486129 + AT_rich Low_complexity Low_complexity 1 22 0 606 129 0 0 chr10 15103658 15103743 -130485545 + AluSc SINE Alu 213 297 -12 1733 228 119 46 chr10 15104059 15104339 -130484949 - L1MC4 LINE L1 -3 8039 7781 1669 179 10 3 chr10 15104339 15104629 -130484659 - AluJo SINE Alu -18 294 3 1733 228 119 46 chr10 15104629 15105038 -130484250 - L1MC4 LINE L1 -261 7781 7300 1562 137 47 8 chr10 15105138 15105394 -130483894 + AluJo SINE Alu 41 306 -6 22 0 0 0 chr10 15105437 15105459 -130483829 + AT_rich Low_complexity Low_complexity 1 22 0 239 163 47 0 chr10 15105466 15105509 -130483779 - L2 LINE L2 -260 3053 3009 2362 96 0 0 chr10 15105589 15105892 -130483396 - AluSx SINE Alu -9 303 1 198 277 0 0 chr10 15106015 15106062 -130483226 - MIR3 SINE MIR -15 193 147 613 162 10 0 chr10 15106580 15106679 -130482609 + MER46A DNA MER2_type 137 236 0 1440 244 150 31 chr10 15106778 15106938 -130482350 + L1M4 LINE L1 2613 2753 -3891 2504 72 0 3 chr10 15106938 15107244 -130482044 + AluY SINE Alu 1 305 -6 1440 244 150 31 chr10 15107244 15107910 -130481378 + L1M4 LINE L1 2753 3537 -3107 288 226 124 138 chr10 15108088 15108305 -130480983 - MIR SINE MIR -1 261 48 267 377 11 2 chr10 15108429 15108546 -130480742 + MIR SINE MIR 32 147 -64 2133 108 0 23 chr10 15109342 15109648 -130479640 + AluSx SINE Alu 3 301 -11 226 288 94 100 chr10 15110757 15110927 -130478361 - L2 LINE L2 -5 3267 3099 5377 139 55 6 chr10 15110949 15111804 -130477484 + MER4D LTR ERV1 2 898 -5 252 200 0 0 chr10 15112155 15112210 -130477078 - L1ME4a LINE L1 0 6121 6067 1897 132 24 14 chr10 15112233 15112529 -130476759 - AluSx SINE Alu -13 299 1 22 0 0 0 chr10 15112769 15112791 -130476497 + AT_rich Low_complexity Low_complexity 1 22 0 670 236 152 6 chr10 15112904 15113082 -130476206 + LTR16C LTR ERVL 288 491 0 2240 95 14 0 chr10 15113267 15113562 -130475726 + AluSp SINE Alu 1 299 -14 578 309 68 16 chr10 15114353 15114591 -130474697 + MIR SINE MIR 4 242 -20 607 238 84 0 chr10 15116072 15116215 -130473073 - Charlie8 DNA MER1_type -2235 182 28 2203 141 133 8 chr10 15116882 15117266 -130472022 - MSTB1 LTR MaLR 0 432 1 189 0 0 0 chr10 15117362 15117383 -130471905 + (TTTTG)n Simple_repeat Simple_repeat 5 25 0 953 61 0 0 chr10 15117383 15117498 -130471790 - AluSg/x SINE Alu -32 280 166 468 242 98 7 chr10 15117560 15117713 -130471575 - LTR16C LTR ERVL -2 489 323 1771 143 7 7 chr10 15119753 15120039 -130469249 - AluJb SINE Alu -10 302 17 247 108 27 0 chr10 15120603 15120640 -130468648 - U2 snRNA snRNA -150 38 1 743 264 51 36 chr10 15120682 15120958 -130468330 - L2 LINE L2 -1 3312 3033 2007 112 17 24 chr10 15121102 15121423 -130467865 + AluSx SINE Alu 1 312 0 2100 136 147 5 chr10 15122816 15123183 -130466105 + MSTA LTR MaLR 7 425 -3 2246 172 108 31 chr10 15123195 15123678 -130465610 + MLT2B1 LTR ERVL 1 520 0 210 283 0 0 chr10 15124157 15124203 -130465085 - L2 LINE L2 -82 3190 3145 1511 123 5 9 chr10 15124321 15124540 -130464748 - AluJb SINE Alu -14 298 81 2154 166 35 29 chr10 15124740 15125288 -130464000 + MLT2A2 LTR ERVL 1 554 0 730 78 0 0 chr10 15125347 15125437 -130463851 - 5S rRNA rRNA -31 90 1 234 0 0 0 chr10 15125830 15125856 -130463432 + (A)n Simple_repeat Simple_repeat 1 26 0 2249 148 0 3 chr10 15126329 15126659 -130462629 + MER7A DNA MER2_type 1 327 -19 271 273 0 13 chr10 15126671 15126748 -130462540 + L2 LINE L2 3193 3268 -4 439 308 123 18 chr10 15127969 15128120 -130461168 - L2 LINE L2 -6 3307 3173 2609 112 3 5 chr10 15128120 15128496 -130460792 - THE1C LTR MaLR 0 375 1 439 308 123 18 chr10 15128496 15128620 -130460668 - L2 LINE L2 -140 3173 3003 2132 118 6 19 chr10 15129972 15130285 -130459003 - AluSc SINE Alu 0 309 1 195 225 0 0 chr10 15130617 15130657 -130458631 - L2 LINE L2 -5 3267 3228 1984 142 10 7 chr10 15131028 15131338 -130457950 + AluJb SINE Alu 1 311 -1 3684 103 33 70 chr10 15131349 15132011 -130457277 + L1MA4A LINE L1 5658 6295 -8 202 277 9 62 chr10 15132661 15132773 -130456515 + L3b LINE CR1 1379 1484 -99 675 282 63 66 chr10 15133061 15133169 -130456119 + MLT1K LTR MaLR 116 223 -365 1725 115 77 71 chr10 15133169 15133508 -130455780 - MER61A LTR ERV1 0 343 3 675 282 63 66 chr10 15133508 15133810 -130455478 + MLT1K LTR MaLR 223 525 -63 204 67 0 0 chr10 15133814 15133844 -130455444 + (A)n Simple_repeat Simple_repeat 1 30 0 2222 103 33 0 chr10 15134026 15134328 -130454960 - AluSx SINE Alu 0 312 1 641 176 9 0 chr10 15134476 15134584 -130454704 - MER7A DNA MER2_type -239 107 1 6427 109 33 29 chr10 15134937 15135972 -130453316 - L1MA5 LINE L1 -2 6298 5260 1879 179 6 0 chr10 15135970 15136323 -130452965 + L1MA5 LINE L1 4921 5275 -871 * 949 251 8 47 chr10 15136317 15136552 -130452736 - L1M3de LINE L1 -6071 582 357 * 873 244 65 101 chr10 15136538 15136668 -130452620 - L1M3de LINE L1 -5710 943 810 * 1225 163 178 38 chr10 15136668 15136932 -130452356 - AluJb SINE Alu -1 301 1 873 244 65 101 chr10 15136932 15137180 -130452108 - L1M3de LINE L1 -5843 810 2 315 320 30 44 chr10 15137558 15137761 -130451527 - L1ME LINE L1 -359 5762 5563 1928 170 0 3 chr10 15137816 15138128 -130451160 + AluJb SINE Alu 1 311 -1 1033 256 6 19 chr10 15138781 15139131 -130450157 + LTR16A LTR ERVL 52 440 -10 185 323 11 21 chr10 15139140 15139233 -130450055 - MIR SINE MIR -168 94 3 2575 52 0 0 chr10 15139280 15139586 -130449702 + AluY SINE Alu 1 306 -5 232 254 0 127 chr10 15139588 15139645 -130449643 - MER5B DNA MER1_type -54 124 88 687 182 0 0 chr10 15139645 15139755 -130449533 + MER81 DNA DNA 5 114 0 232 254 0 127 chr10 15139755 15139815 -130449473 - MER5B DNA MER1_type -90 88 22 206 250 0 36 chr10 15139775 15139831 -130449457 + MER5A DNA MER1_type 130 183 -6 * 516 200 77 8 chr10 15139939 15140069 -130449219 - MIR SINE MIR -101 161 23 204 333 75 25 chr10 15140369 15140489 -130448799 - L2 LINE L2 -10 3262 3137 221 182 18 0 chr10 15140549 15140604 -130448684 + CT-rich Low_complexity Low_complexity 3 58 0 210 329 0 14 chr10 15140966 15141036 -130448252 + MIR SINE MIR 20 88 -174 1984 156 0 3 chr10 15141068 15141370 -130447918 - AluJo SINE Alu -10 302 2 3589 71 4 0 chr10 15141592 15142043 -130447245 + MLT2A2 LTR ERVL 1 453 0 2409 94 0 0 chr10 15142232 15142530 -130446758 + AluSx SINE Alu 1 298 -14 590 223 0 36 chr10 15142718 15142857 -130446431 + LTR16A LTR ERVL 259 392 -58 230 318 143 32 chr10 15143086 15143240 -130446048 - MER5A DNA MER1_type -2 187 17 * 311 252 165 8 chr10 15143115 15143242 -130446046 + MER5A DNA MER1_type 43 189 0 230 313 64 73 chr10 15143254 15143596 -130445692 - MLT1K LTR MaLR -115 473 135 2260 125 0 0 chr10 15144187 15144491 -130444797 + AluSx SINE Alu 1 304 -8 2795 74 0 0 chr10 15144491 15144868 -130444420 + L1PA7 LINE L1 5802 6178 0 1792 175 35 38 chr10 15145881 15146110 -130443178 - MLT1A1 LTR MaLR 0 365 136 2262 115 3 3 chr10 15146110 15146422 -130442866 + AluSx SINE Alu 1 312 0 1792 175 35 38 chr10 15146422 15146558 -130442730 - MLT1A1 LTR MaLR -229 136 1 1496 170 42 64 chr10 15146756 15147068 -130442220 - AluJo SINE Alu -7 305 1 2026 150 3 13 chr10 15147078 15147392 -130441896 - AluJo SINE Alu -1 311 1 2083 111 26 88 chr10 15147711 15148047 -130441241 - THE1B LTR MaLR -2 362 51 2280 103 0 13 chr10 15148047 15148349 -130440939 + AluSx SINE Alu 1 298 -14 2083 111 26 88 chr10 15148349 15148398 -130440890 - THE1B LTR MaLR -313 51 1 231 250 0 0 chr10 15149746 15149830 -130439458 + (CA)n Simple_repeat Simple_repeat 1 84 0 2141 153 49 35 chr10 15149837 15150380 -130438908 + MLT2A2 LTR ERVL 1 554 0 183 259 0 0 chr10 15150380 15150438 -130438850 + (CA)n Simple_repeat Simple_repeat 1 58 0 377 257 76 0 chr10 15150949 15151054 -130438234 - L2 LINE L2 -1 3271 3159 1708 171 73 0 chr10 15151059 15151345 -130437943 + AluJb SINE Alu 1 307 -5 1806 156 33 23 chr10 15151620 15151927 -130437361 + AluJb SINE Alu 1 310 -2 309 109 0 0 chr10 15151941 15151987 -130437301 + (GGGA)n Simple_repeat Simple_repeat 4 49 0 506 259 91 49 chr10 15152080 15152378 -130436910 + LTR33 LTR ERVL 97 445 -76 2245 98 3 7 chr10 15152378 15152685 -130436603 - AluSc SINE Alu -3 306 1 506 259 91 49 chr10 15152685 15152766 -130436522 + LTR33 LTR ERVL 445 521 0 855 189 0 7 chr10 15152972 15153125 -130436163 - FRAM SINE Alu -14 152 1 301 263 59 25 chr10 15153403 15153521 -130435767 - MIR SINE MIR -24 238 117 2243 112 3 3 chr10 15153537 15153841 -130435447 + AluSx SINE Alu 1 304 -8 413 217 76 0 chr10 15154533 15154625 -130434663 - MER94 DNA DNA -34 100 2 1201 203 28 80 chr10 15155101 15155123 -130434165 - L1MA9 LINE L1 -38 6274 6252 2296 81 7 7 chr10 15155123 15155419 -130433869 + AluSx SINE Alu 1 296 -16 1201 203 28 80 chr10 15155419 15155786 -130433502 - L1MA9 LINE L1 -60 6252 5905 8812 187 23 17 chr10 15155859 15156321 -130432967 - L1MA9 LINE L1 -366 5946 5488 2241 91 3 3 chr10 15156321 15156606 -130432682 - AluSp SINE Alu -21 292 8 8812 187 23 17 chr10 15156606 15158601 -130430687 - L1MA9 LINE L1 -824 5488 3481 2118 143 0 0 chr10 15159772 15160073 -130429215 + AluSx SINE Alu 1 301 -11 214 384 48 0 chr10 15160453 15160578 -130428710 - MIR SINE MIR -53 209 79 502 120 13 0 chr10 15160752 15160827 -130428461 - MADE1 DNA Mariner -4 76 1 2850 178 13 5 chr10 15161120 15161671 -130427617 - MLT2B1 LTR ERVL 0 554 1 2343 104 0 13 chr10 15161846 15162162 -130427126 - AluSx SINE Alu 0 312 1 234 0 0 0 chr10 15162757 15162783 -130426505 + (A)n Simple_repeat Simple_repeat 1 26 0 2266 115 0 6 chr10 15163161 15163475 -130425813 - AluSx SINE Alu 0 312 1 191 271 112 28 chr10 15163528 15163635 -130425653 - MIR3 SINE MIR -3 205 90 1769 171 26 10 chr10 15164275 15164580 -130424708 - AluSx SINE Alu -2 310 1 1191 190 52 54 chr10 15164765 15165219 -130424069 + LTR29 LTR ERV1 138 644 0 2247 95 6 25 chr10 15165247 15165563 -130423725 - AluSx SINE Alu -2 310 1 333 0 0 0 chr10 15166198 15166235 -130423053 + (TG)n Simple_repeat Simple_repeat 2 38 0 4466 178 9 57 chr10 15166550 15166676 -130422612 + L1MB3 LINE L1 5208 5338 -845 2156 150 0 0 chr10 15166676 15166983 -130422305 + AluSx SINE Alu 1 307 -5 4466 178 9 57 chr10 15166983 15167772 -130421516 + L1MB3 LINE L1 5338 6163 -20 4032 149 12 22 chr10 15167772 15168155 -130421133 + LTR51 LTR ERV1 1 375 -296 1463 161 0 74 chr10 15168155 15168440 -130420848 - AluJo SINE Alu -21 291 28 4032 149 12 22 chr10 15168440 15168734 -130420554 + LTR51 LTR ERV1 375 671 0 4466 178 9 57 chr10 15168734 15168784 -130420504 + L1MB3 LINE L1 6163 6128 -55 2085 98 8 4 chr10 15168784 15169068 -130420220 + AluSg SINE Alu 1 285 -25 256 20 41 41 chr10 15169068 15169117 -130420171 + (CAAAA)n Simple_repeat Simple_repeat 2 180 0 4466 178 9 57 chr10 15169117 15169161 -130420127 + L1MB3 LINE L1 6127 6172 -11 1947 149 0 10 chr10 15170019 15170315 -130418973 - AluSx SINE Alu -19 293 1 5343 169 24 22 chr10 15170550 15171211 -130418077 + L1MC2 LINE L1 5122 5734 -610 2466 121 5 24 chr10 15171211 15171582 -130417706 - THE1B LTR MaLR 0 364 1 5343 169 24 22 chr10 15171582 15172186 -130417102 + L1MC2 LINE L1 5734 6335 -9 550 146 0 0 chr10 15172242 15172324 -130416964 + FRAM SINE Alu 43 124 -52 384 22 0 0 chr10 15172367 15172412 -130416876 + (CA)n Simple_repeat Simple_repeat 2 46 0 257 152 22 0 chr10 15172417 15172463 -130416825 - MER5B DNA MER1_type -46 132 86 579 241 0 0 chr10 15172463 15172571 -130416717 + Tigger3(Golem) DNA MER2_type 1 108 -2921 * 4363 120 29 41 chr10 15172563 15172854 -130416434 + Tigger3(Golem) DNA MER2_type 2278 2571 -457 2098 121 7 7 chr10 15172854 15173144 -130416144 - AluSg SINE Alu -20 290 1 4363 120 29 41 chr10 15173144 15173574 -130415714 + Tigger3(Golem) DNA MER2_type 2571 2992 -36 2301 112 0 0 chr10 15173574 15173877 -130415411 - AluSx SINE Alu -9 303 1 4363 120 29 41 chr10 15173877 15173913 -130415375 + Tigger3(Golem) DNA MER2_type 2992 3027 -1 696 138 0 0 chr10 15174103 15174212 -130415076 + L1MA2 LINE L1 6196 6304 0 1986 115 4 11 chr10 15174243 15174522 -130414766 + AluSx SINE Alu 1 277 -35 202 182 0 0 chr10 15174545 15174578 -130414710 + polypurine Low_complexity Low_complexity 2 34 0 283 196 0 0 chr10 15175130 15175186 -130414102 + L1ME LINE L1 5579 5634 -487 3255 134 2 2 chr10 15175655 15176140 -130413148 + L1PA15 LINE L1 5679 6163 -2 431 282 103 34 chr10 15176834 15177355 -130411933 + HAL1 LINE L1 619 1200 -1307 291 216 0 0 chr10 15177369 15177419 -130411869 - MLT1F1 LTR MaLR 0 542 493 2476 212 38 22 chr10 15177419 15177919 -130411369 + MLT2B3 LTR ERVL 1 508 -46 1686 199 145 8 chr10 15178133 15178519 -130410769 - MLT1F1 LTR MaLR -47 520 82 216 218 146 0 chr10 15178643 15178698 -130410590 + MIR SINE MIR 89 151 -111 2109 109 7 13 chr10 15178748 15179052 -130410236 + AluSx SINE Alu 2 303 -9 1820 214 45 75 chr10 15179205 15179776 -130409512 - MLT2B3 LTR ERVL 0 554 1 2079 97 0 49 chr10 15179986 15180274 -130409014 + AluSx SINE Alu 3 276 -36 441 193 0 48 chr10 15180274 15180461 -130408827 + GA-rich Low_complexity Low_complexity 3 180 0 221 136 0 23 chr10 15180463 15180507 -130408781 + (GGAA)n Simple_repeat Simple_repeat 2 44 0 228 236 59 71 chr10 15180842 15180981 -130408307 - MIR SINE MIR -67 141 42 681 233 112 8 chr10 15181477 15181914 -130407374 + LTR33A LTR ERVL 1 519 -4 476 265 45 23 chr10 15181957 15182089 -130407199 + MIR3 SINE MIR 33 167 -41 2281 111 0 0 chr10 15182197 15182494 -130406794 - AluSx SINE Alu -15 297 1 7411 47 2 0 chr10 15182785 15183957 -130405331 - L1PA6 LINE L1 0 6154 4983 2020 192 15 5 chr10 15184010 15184405 -130404883 - L1MB7 LINE L1 -54 6130 5732 * 2250 179 32 6 chr10 15184400 15184974 -130404314 - L1MB7 LINE L1 -661 5517 4935 251 35 0 0 chr10 15185960 15185989 -130403299 + LTR6A LTR ERV1 73 101 -463 1233 208 50 13 chr10 15186144 15186462 -130402826 - L1M4 LINE L1 -1094 5052 4723 1461 197 7 124 chr10 15187346 15187758 -130401530 - MLT1A2 LTR MaLR 0 374 11 1354 105 0 0 chr10 15187763 15187934 -130401354 - AluSg/x SINE Alu -8 304 134 2342 100 3 0 chr10 15187934 15188234 -130401054 - AluSq SINE Alu -12 301 1 4007 103 2 0 chr10 15188701 15189227 -130400061 - MER1A DNA MER1_type 0 527 1 1319 260 60 16 chr10 15189327 15189692 -130399596 + LTR16C LTR ERVL 36 416 -75 189 0 0 0 chr10 15190272 15190293 -130398995 + (TG)n Simple_repeat Simple_repeat 1 21 0 1493 221 0 20 chr10 15190939 15191237 -130398051 - AluJo SINE Alu -17 295 4 331 203 0 0 chr10 15191248 15191317 -130397971 - MIR SINE MIR -108 154 86 249 322 44 0 chr10 15191333 15191423 -130397865 - L2 LINE L2 -17 3296 3203 539 185 42 111 chr10 15191536 15191595 -130397693 - MER5B DNA MER1_type -2 176 115 4589 56 0 0 chr10 15191595 15192150 -130397138 + L1PA8 LINE L1 5608 6162 -10 539 185 42 111 chr10 15192150 15192279 -130397009 - MER5B DNA MER1_type -63 115 1 399 335 118 20 chr10 15192538 15192688 -130396600 - L2 LINE L2 -562 2752 2618 655 171 9 0 chr10 15192688 15192799 -130396489 - MER81 DNA DNA 0 114 3 399 335 118 20 chr10 15192799 15193039 -130396249 - L2 LINE L2 -696 2618 2324 274 235 147 59 chr10 15193094 15193196 -130396092 - L2 LINE L2 -18 3254 3144 2213 116 0 0 chr10 15193221 15193513 -130395775 + AluSx SINE Alu 1 292 -20 2024 163 42 0 chr10 15193565 15193896 -130395392 + MER7A DNA MER2_type 1 343 -3 331 346 8 0 chr10 15193948 15194075 -130395213 - MER94 DNA DNA -3 131 4 316 79 22 93 chr10 15194740 15194879 -130394409 + (TTATA)n Simple_repeat Simple_repeat 1 129 0 234 243 40 20 chr10 15194916 15195068 -130394220 + (TATAA)n Simple_repeat Simple_repeat 5 159 0 462 284 65 14 chr10 15195590 15195778 -130393510 - MIR SINE MIR -64 198 4 1656 113 4 9 chr10 15196318 15196549 -130392739 - MER30 DNA MER1_type 0 230 1 534 108 24 0 chr10 15196685 15196768 -130392520 - AluY SINE Alu -11 300 216 1447 115 42 0 chr10 15197123 15197340 -130391948 - MER30 DNA MER1_type 0 230 5 204 262 119 32 chr10 15198120 15198246 -130391042 - MIR3 SINE MIR -25 183 47 253 274 16 0 chr10 15199190 15199252 -130390036 + GA-rich Low_complexity Low_complexity 4 66 0 1605 168 33 4 chr10 15199281 15199594 -130389694 + AluSx SINE Alu 1 321 0 312 27 0 0 chr10 15199705 15199742 -130389546 + (TC)n Simple_repeat Simple_repeat 1 37 0 324 321 23 59 chr10 15199951 15200172 -130389116 - MIR SINE MIR -20 242 30 607 261 145 48 chr10 15200779 15201193 -130388095 - MLT1H LTR MaLR -13 536 83 726 226 97 196 chr10 15201375 15201558 -130387730 + MLT1K LTR MaLR 14 213 -375 234 91 0 0 chr10 15201558 15201591 -130387697 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 726 226 97 196 chr10 15201591 15201879 -130387409 + MLT1K LTR MaLR 213 410 -178 4751 141 41 15 chr10 15201879 15202739 -130386549 + L1MC2 LINE L1 5462 6343 -1 726 226 97 196 chr10 15202739 15202894 -130386394 + MLT1K LTR MaLR 410 579 -9 2267 54 50 30 chr10 15203657 15203955 -130385333 - AluY SINE Alu -7 304 1 1919 153 0 19 chr10 15204045 15204359 -130384929 - AluJo SINE Alu -4 308 1 206 310 100 10 chr10 15204417 15204517 -130384771 + L2 LINE L2 3198 3306 -7 201 343 143 13 chr10 15204690 15205005 -130384283 + L2 LINE L2 1728 2083 -1231 25219 153 33 19 chr10 15205006 15209426 -130379862 - L1P4 LINE L1 -709 5459 974 189 74 0 0 chr10 15209426 15209453 -130379835 + (TTG)n Simple_repeat Simple_repeat 1 27 0 25219 153 33 19 chr10 15209453 15209759 -130379529 - L1P4 LINE L1 -5194 974 674 417 355 160 3 chr10 15209923 15210205 -130379083 + L2 LINE L2 2947 3272 0 545 247 96 83 chr10 15210264 15210755 -130378533 + LTR67 LTR ERVL 2 556 -1 2286 105 0 0 chr10 15212271 15212566 -130376722 + AluSx SINE Alu 1 295 -17 804 195 34 13 chr10 15212617 15212766 -130376522 + AluJo SINE Alu 12 163 -149 888 193 6 6 chr10 15213442 15213608 -130375680 - FRAM SINE Alu -10 166 1 1980 145 3 3 chr10 15214591 15214887 -130374401 + AluJo SINE Alu 1 296 -16 347 246 9 18 chr10 15215093 15215207 -130374081 + (CA)n Simple_repeat Simple_repeat 2 114 0 2188 125 7 0 chr10 15215875 15216180 -130373108 - AluSx SINE Alu -5 307 1 369 255 108 40 chr10 15216454 15216705 -130372583 + MLT1K LTR MaLR 290 557 -31 1296 96 12 0 chr10 15217262 15217428 -130371860 + AluSq SINE Alu 62 229 -84 207 100 0 0 chr10 15217438 15217468 -130371820 + (A)n Simple_repeat Simple_repeat 1 30 0 235 261 75 60 chr10 15217755 15217889 -130371399 - MIR3 SINE MIR -37 171 36 423 345 7 0 chr10 15217916 15218064 -130371224 + L2 LINE L2 3123 3271 -1 1330 171 56 0 chr10 15218228 15218462 -130370826 + MLT2C1 LTR ERVL 1 247 -150 4667 91 25 5 chr10 15218464 15219110 -130370178 + L1PA13 LINE L1 5502 6160 -3 547 250 66 7 chr10 15219273 15219409 -130369879 + MLT2C1 LTR ERVL 234 377 -20 186 43 0 0 chr10 15219835 15219858 -130369430 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 458 265 24 36 chr10 15220346 15220512 -130368776 + MER5B DNA MER1_type 1 164 -14 761 169 50 12 chr10 15220673 15220833 -130368455 + FRAM SINE Alu 1 166 0 2269 81 7 3 chr10 15220838 15221166 -130368122 + AluSp SINE Alu 1 329 0 431 305 20 33 chr10 15221448 15221599 -130367689 + L2 LINE L2 3123 3271 -1 1961 161 0 0 chr10 15221649 15221953 -130367335 - AluSq SINE Alu -9 304 1 2124 92 0 0 chr10 15222720 15222982 -130366306 + AluSx SINE Alu 50 311 -1 2039 127 13 3 chr10 15223540 15223840 -130365448 - AluSx SINE Alu -9 303 1 481 312 13 0 chr10 15224023 15224177 -130365111 - MLT1L LTR MaLR -132 483 328 1750 125 0 4 chr10 15224456 15224696 -130364592 + AluSx SINE Alu 43 283 -29 432 0 0 0 chr10 15224696 15224744 -130364544 + (CA)n Simple_repeat Simple_repeat 1 48 0 2058 117 7 0 chr10 15224922 15225212 -130364076 + AluSx SINE Alu 1 292 -20 445 210 83 38 chr10 15228425 15228582 -130360706 - L2 LINE L2 -456 2858 2695 6410 206 42 17 chr10 15228678 15228958 -130360330 + L1 LINE L1 3423 3695 -2451 216 97 0 0 chr10 15228958 15228989 -130360299 + (TA)n Simple_repeat Simple_repeat 2 32 0 * 507 17 0 0 chr10 15228988 15229048 -130360240 + (GA)n Simple_repeat Simple_repeat 2 61 0 6410 206 42 17 chr10 15228989 15229048 -130360240 + L1 LINE L1 3695 3751 -2395 1919 115 11 0 chr10 15229048 15229318 -130359970 - AluSx SINE Alu -39 273 1 6410 206 42 17 chr10 15229318 15230524 -130358764 + L1 LINE L1 3747 4948 -1194 565 171 0 0 chr10 15230524 15230629 -130358659 + L1MB3 LINE L1 6075 6179 -4 2128 118 0 10 chr10 15231306 15231612 -130357676 - AluSg SINE Alu -7 303 1 2304 113 0 0 chr10 15232169 15232478 -130356810 + AluSg SINE Alu 1 309 -1 283 304 80 0 chr10 15232497 15232622 -130356666 - MER104 DNA Tc2 -4 176 42 279 0 0 0 chr10 15232902 15232933 -130356355 + (A)n Simple_repeat Simple_repeat 1 31 0 1385 152 76 0 chr10 15233276 15233539 -130355749 + L1MA4 LINE L1 6012 6294 -6 26 30 0 0 chr10 15233546 15233579 -130355709 + AT_rich Low_complexity Low_complexity 1 33 0 697 203 15 0 chr10 15233606 15233739 -130355549 - AluJo SINE Alu -176 136 2 511 294 0 75 chr10 15233843 15233998 -130355290 + MIR SINE MIR 10 140 -122 2153 110 3 0 chr10 15233998 15234290 -130354998 + AluY SINE Alu 1 293 -18 511 294 0 75 chr10 15234290 15234386 -130354902 + MIR SINE MIR 140 242 -20 203 152 0 0 chr10 15238501 15238534 -130350754 + (TTCA)n Simple_repeat Simple_repeat 4 36 0 675 213 100 30 chr10 15238821 15239051 -130350237 - MIR SINE MIR -15 247 2 5580 57 1 0 chr10 15239156 15239836 -130349452 + L1PA6 LINE L1 5463 6143 -11 255 241 213 9 chr10 15239847 15239955 -130349333 + L1MC/D LINE L1 5637 5766 -2042 1484 171 0 33 chr10 15239974 15240249 -130349039 + AluJb SINE Alu 1 266 -46 210 71 0 0 chr10 15240308 15240336 -130348952 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 23 0 0 0 chr10 15240435 15240458 -130348830 + AT_rich Low_complexity Low_complexity 1 23 0 2329 170 31 87 chr10 15240500 15241042 -130348246 - MER41C LTR ERV1 0 554 43 564 104 0 0 chr10 15241042 15241119 -130348169 + MER41B LTR ERV1 9 85 -550 597 300 112 58 chr10 15241710 15241912 -130347376 + MLT1K LTR MaLR 24 214 -374 2177 115 10 0 chr10 15241912 15242200 -130347088 + AluSg SINE Alu 1 291 -19 597 300 112 58 chr10 15242200 15242533 -130346755 + MLT1K LTR MaLR 214 588 0 362 226 81 16 chr10 15242818 15242942 -130346346 + HAL1 LINE L1 2204 2335 -172 319 284 67 42 chr10 15242955 15243194 -130346094 + HAL1 LINE L1 2257 2501 -6 260 257 46 46 chr10 15243389 15243498 -130345790 + HAL1 LINE L1 2386 2494 -13 2391 60 0 60 chr10 15244304 15244623 -130344665 + AluY SINE Alu 1 300 -11 1367 195 164 0 chr10 15245034 15245332 -130343956 + MER7A DNA MER2_type 1 345 -1 2379 96 3 0 chr10 15245391 15245692 -130343596 - AluSx SINE Alu -10 302 1 2303 116 3 3 chr10 15246040 15246351 -130342937 - AluSq SINE Alu -2 311 1 294 196 120 68 chr10 15247115 15247248 -130342040 + HAL1 LINE L1 58 197 -2310 1745 157 14 17 chr10 15247628 15247921 -130341367 - AluJb SINE Alu -5 307 16 1246 183 100 95 chr10 15247930 15248171 -130341117 + L1MD3 LINE L1 6746 6991 -1004 2053 145 0 0 chr10 15248171 15248460 -130340828 + AluSx SINE Alu 1 289 -23 1246 183 100 95 chr10 15248460 15248628 -130340660 + L1MD3 LINE L1 6991 7157 -838 1299 243 122 32 chr10 15248752 15249221 -130340067 - LTR33 LTR ERVL -1 520 10 787 227 0 0 chr10 15249681 15249844 -130339444 - FRAM SINE Alu -10 166 4 361 331 8 8 chr10 15250172 15250299 -130338989 + MIR SINE MIR 21 147 -61 213 273 0 136 chr10 15251205 15251295 -130337993 - L2 LINE L2 -226 3046 2984 2230 126 30 30 chr10 15251295 15251659 -130337629 - THE1B LTR MaLR 0 364 1 213 273 0 136 chr10 15251659 15251722 -130337566 - L2 LINE L2 -288 2984 2914 1369 179 44 44 chr10 15252300 15252596 -130336692 + AluJb SINE Alu 1 296 -16 1541 221 60 12 chr10 15252597 15252999 -130336289 - L1ME1 LINE L1 -15 6151 5731 * 1741 183 20 17 chr10 15252996 15253352 -130335936 - L1ME1 LINE L1 -1200 4946 4590 1158 260 66 55 chr10 15253420 15253760 -130335528 - MER74B LTR ERVL -83 539 191 2120 125 3 10 chr10 15253760 15254055 -130335233 + AluSx SINE Alu 1 293 -19 1158 260 66 55 chr10 15254055 15254183 -130335105 - MER74B LTR ERVL -431 191 66 795 189 63 17 chr10 15254239 15254414 -130334874 + MLT1D LTR MaLR 9 191 -314 2375 95 3 0 chr10 15254474 15254778 -130334510 + AluSp SINE Alu 1 305 -8 2732 20 0 0 chr10 15254877 15255174 -130334114 + AluYa5 SINE Alu 1 297 -14 10636 27 1 0 chr10 15255299 15257302 -130331986 + L1PA4 LINE L1 4151 6153 -2 28 48 0 0 chr10 15257606 15257648 -130331640 + AT_rich Low_complexity Low_complexity 1 42 0 708 188 61 1 chr10 15257688 15257848 -130331440 + MLT1A1 LTR MaLR 214 365 0 2342 117 0 0 chr10 15258030 15258338 -130330950 - AluSx SINE Alu -4 308 1 1953 147 0 7 chr10 15258438 15258730 -130330558 + AluJb SINE Alu 1 290 -22 4438 172 44 9 chr10 15259208 15259463 -130329825 + L1MB1 LINE L1 4518 4762 -1406 2232 124 0 3 chr10 15259463 15259761 -130329527 + AluSx SINE Alu 1 297 -15 4438 172 44 9 chr10 15259761 15260988 -130328300 + L1MB1 LINE L1 4762 6044 -124 1581 157 29 32 chr10 15261372 15261685 -130327603 + AluJo SINE Alu 1 312 0 1286 262 171 19 chr10 15261706 15262455 -130326833 - L2 LINE L2 -1480 1834 972 721 206 0 14 chr10 15262678 15262824 -130326464 - FRAM SINE Alu -6 170 27 325 281 55 20 chr10 15262826 15262972 -130326316 + L2 LINE L2 1356 1506 -1808 258 286 0 31 chr10 15264072 15264170 -130325118 + L1ME4a LINE L1 5961 6055 -66 1197 174 109 62 chr10 15264177 15264452 -130324836 - AluJo SINE Alu -7 305 18 227 241 48 72 chr10 15264560 15264643 -130324645 - MIR SINE MIR -65 197 117 232 337 24 0 chr10 15264921 15265004 -130324284 - MIR SINE MIR -146 116 32 5189 199 75 71 chr10 15265195 15266116 -130323172 + L1MC4 LINE L1 6469 7385 -657 2213 84 3 11 chr10 15266116 15266422 -130322866 - AluSg SINE Alu 0 304 1 5189 199 75 71 chr10 15266422 15266711 -130322577 + L1MC4 LINE L1 7385 7671 -371 866 148 0 15 chr10 15266711 15266846 -130322442 + FLAM_C SINE Alu 1 133 0 5189 199 75 71 chr10 15266846 15267200 -130322088 + L1MC4 LINE L1 7671 8041 -1 1929 137 14 0 chr10 15267209 15267501 -130321787 + AluJo SINE Alu 1 296 -16 186 133 0 0 chr10 15267501 15267531 -130321757 + (TATATG)n Simple_repeat Simple_repeat 2 31 0 251 158 0 0 chr10 15267538 15267576 -130321712 + U2 snRNA snRNA 1 38 -150 2023 129 23 3 chr10 15268050 15268352 -130320936 + AluSq SINE Alu 1 308 -5 3939 132 41 50 chr10 15268669 15269402 -130319886 - L1PB3 LINE L1 -8 6146 5421 435 344 26 10 chr10 15269767 15269962 -130319326 - MIR SINE MIR -15 247 50 2176 115 10 0 chr10 15270062 15270357 -130318931 + AluSx SINE Alu 1 298 -14 2547 47 7 0 chr10 15270934 15271233 -130318055 - AluY SINE Alu -10 301 1 2356 93 0 3 chr10 15271524 15271825 -130317463 - AluSg SINE Alu -10 300 1 269 64 5 101 chr10 15271889 15271980 -130317308 + Alu SINE Alu 1 52 -250 2222 110 19 50 chr10 15272773 15273190 -130316098 + MER11C LTR ERVK 668 1071 0 988 206 149 36 chr10 15273190 15273525 -130315763 + L1ME2 LINE L1 5674 6046 -118 2395 99 0 0 chr10 15274235 15274539 -130314749 + AluSx SINE Alu 1 304 -8 374 147 54 12 chr10 15274871 15274986 -130314302 - AluS SINE Alu -8 293 228 282 294 4 35 chr10 15275363 15275497 -130313791 + CT-rich Low_complexity Low_complexity 1 129 0 2016 127 31 3 chr10 15275769 15276061 -130313227 + AluSx SINE Alu 1 300 -12 1008 238 14 5 chr10 15276560 15276770 -130312518 + MER58A DNA MER1_type 3 214 -10 373 295 32 32 chr10 15276833 15276989 -130312299 + L2 LINE L2 3158 3313 0 1219 211 55 52 chr10 15277926 15278290 -130310998 - MLT1A1 LTR MaLR 0 365 1 201 340 72 0 chr10 15278515 15278612 -130310676 - MIR SINE MIR -87 121 47 252 156 0 0 chr10 15278905 15278950 -130310338 - Charlie1b DNA MER1_type -8 515 471 638 99 0 22 chr10 15279270 15279361 -130309927 + AluJb SINE Alu 200 288 -24 22 70 0 0 chr10 15279888 15279931 -130309357 + GC_rich Low_complexity Low_complexity 1 43 0 21 36 0 0 chr10 15279987 15280015 -130309273 + GC_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr10 15280156 15280186 -130309102 + GC_rich Low_complexity Low_complexity 1 30 0 301 205 256 0 chr10 15280682 15280760 -130308528 - AluJ/FLAM SINE Alu -204 98 1 969 228 112 0 chr10 15280764 15281005 -130308283 - Charlie1b DNA MER1_type -255 268 1 205 289 79 0 chr10 15281230 15281306 -130307982 - L2 LINE L2 -266 3047 2966 459 227 16 23 chr10 15281349 15281477 -130307811 + L2 LINE L2 3167 3293 -20 583 255 89 46 chr10 15281618 15281920 -130307368 - L2 LINE L2 -945 2369 2055 2352 76 0 3 chr10 15283003 15283293 -130305995 + AluY SINE Alu 23 311 0 2178 77 14 3 chr10 15283328 15283613 -130305675 + AluY SINE Alu 1 288 -23 430 244 15 61 chr10 15283658 15283931 -130305357 + MER46C DNA MER2_type 6 338 0 2011 104 7 0 chr10 15283990 15284260 -130305028 - AluSx SINE Alu -40 272 1 584 198 60 82 chr10 15284460 15284642 -130304646 - MER5B DNA MER1_type 0 178 1 2425 87 55 63 chr10 15285525 15285892 -130303396 + MER51A LTR ERV1 1 364 -270 7423 36 11 0 chr10 15286029 15287641 -130301647 + L1PA5 LINE L1 4520 6146 -8 23 0 0 0 chr10 15287641 15287664 -130301624 + AT_rich Low_complexity Low_complexity 1 23 0 1061 141 0 65 chr10 15287731 15287916 -130301372 - FRAM SINE Alu -10 166 1 470 299 12 102 chr10 15287922 15288166 -130301122 - MLT1B LTR MaLR -90 300 79 28 0 0 0 chr10 15288764 15288792 -130300496 + AT_rich Low_complexity Low_complexity 1 28 0 232 269 76 35 chr10 15288799 15288996 -130300292 + L1M4 LINE L1 3775 3979 -2167 1687 122 8 16 chr10 15288997 15289242 -130300046 + AluJb SINE Alu 1 243 -69 477 138 30 22 chr10 15289346 15289449 -130299839 - L1P5 LINE L1 -396 5758 5652 198 71 0 0 chr10 15289450 15289478 -130299810 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 2135 133 3 0 chr10 15289483 15289785 -130299503 + AluSx SINE Alu 4 306 -6 2120 129 7 7 chr10 15289999 15290308 -130298980 + AluSx SINE Alu 1 309 -3 1825 186 0 0 chr10 15290639 15290945 -130298343 - AluJo SINE Alu -5 307 2 532 189 83 8 chr10 15291005 15291137 -130298151 - L1ME3 LINE L1 -1 6161 6020 933 160 97 55 chr10 15292374 15292483 -130296805 - MER2 DNA MER2_type -4 341 238 1979 117 3 23 chr10 15292483 15292782 -130296506 + AluSx SINE Alu 1 293 -19 933 160 97 55 chr10 15292782 15292814 -130296474 - MER2 DNA MER2_type -107 238 209 1966 117 122 35 chr10 15292814 15293169 -130296119 + MSTA LTR MaLR 1 395 -33 2254 109 3 0 chr10 15293169 15293471 -130295817 - AluSx SINE Alu -9 303 1 1966 117 122 35 chr10 15293471 15293509 -130295779 + MSTA LTR MaLR 395 428 0 933 160 97 55 chr10 15293509 15293603 -130295685 - MER2 DNA MER2_type -136 209 95 1010 125 26 0 chr10 15294480 15294632 -130294656 + AluSg/x SINE Alu 138 293 -17 251 82 82 61 chr10 15295492 15295541 -130293747 + MLT1J LTR MaLR 393 442 -69 2611 144 13 27 chr10 15295622 15295919 -130293369 + MER65A LTR ERV1 1 291 -154 2077 114 0 29 chr10 15295919 15296225 -130293063 - AluSx SINE Alu -15 297 1 2611 144 13 27 chr10 15296225 15296378 -130292910 + MER65A LTR ERV1 291 445 0 474 206 10 0 chr10 15296436 15296538 -130292750 + MER5A DNA MER1_type 9 111 -78 2366 111 5 37 chr10 15296593 15296972 -130292316 - L1PB3 LINE L1 -1 6153 5787 2242 94 0 13 chr10 15297003 15297312 -130291976 - AluY SINE Alu -6 305 1 611 126 0 1 chr10 15297773 15298156 -130291132 + AluSx SINE Alu 1 428 0 207 0 0 0 chr10 15298159 15298182 -130291106 + (CAG)n Simple_repeat Simple_repeat 3 25 0 741 165 0 0 chr10 15298182 15298431 -130290857 + GA-rich Low_complexity Low_complexity 1 249 0 756 117 0 18 chr10 15298439 15298610 -130290678 + (GAA)n Simple_repeat Simple_repeat 3 170 0 606 267 134 9 chr10 15298726 15298943 -130290345 - MIR SINE MIR -17 245 2 1677 132 20 66 chr10 15298993 15299296 -130289992 + AluJb SINE Alu 1 289 -23 30 59 0 0 chr10 15299506 15299557 -130289731 + AT_rich Low_complexity Low_complexity 1 51 0 2079 143 3 0 chr10 15299670 15299970 -130289318 + AluSx SINE Alu 1 301 -11 2133 122 3 3 chr10 15300426 15300722 -130288566 + AluSc SINE Alu 1 296 -13 1642 158 6 76 chr10 15300786 15301116 -130288172 + AluJb SINE Alu 3 309 -3 815 191 198 0 chr10 15301391 15301553 -130287735 + AluJo SINE Alu 1 194 -118 585 308 49 51 chr10 15301618 15301682 -130287606 - L1MEd LINE L1 -5284 835 772 2064 125 23 3 chr10 15301682 15301985 -130287303 - AluSx SINE Alu -3 309 1 585 308 49 51 chr10 15301985 15302310 -130286978 - L1MEd LINE L1 -5347 772 447 489 357 18 47 chr10 15302416 15302626 -130286662 - L1MEd LINE L1 -5305 814 618 2466 97 0 0 chr10 15302626 15302937 -130286351 + AluSq SINE Alu 1 311 -2 489 357 18 47 chr10 15302937 15303107 -130286181 - L1MEd LINE L1 -5501 618 445 521 164 16 16 chr10 15303525 15303645 -130285643 + (TA)n Simple_repeat Simple_repeat 2 124 -5 2119 110 0 10 chr10 15303645 15303936 -130285352 - AluSc SINE Alu -21 288 1 521 164 16 16 chr10 15303936 15303943 -130285345 + (TA)n Simple_repeat Simple_repeat 123 129 0 1852 270 74 28 chr10 15303996 15304908 -130284380 - L2 LINE L2 0 3313 2358 2245 118 3 6 chr10 15304908 15305221 -130284067 - AluSx SINE Alu 0 312 1 1852 270 74 28 chr10 15305221 15305255 -130284033 - L2 LINE L2 -955 2358 2327 1297 219 16 39 chr10 15305256 15305567 -130283721 + MLT2D LTR ERVL 68 371 -43 312 109 5 5 chr10 15305607 15305665 -130283623 + MLT2C2 LTR ERVL 424 464 0 853 280 69 15 chr10 15305665 15305997 -130283291 - L2 LINE L2 -995 2319 1970 1879 181 3 3 chr10 15306121 15306431 -130282857 + AluSx SINE Alu 1 310 -2 306 238 75 0 chr10 15306676 15306756 -130282532 - L2 LINE L2 0 3272 3187 28 29 0 0 chr10 15307724 15307759 -130281529 + AT_rich Low_complexity Low_complexity 1 35 0 769 300 52 43 chr10 15307835 15308162 -130281126 - MER102b DNA MER1_type -1 340 11 2097 128 13 0 chr10 15308712 15309018 -130280270 + AluSx SINE Alu 1 310 -2 2086 80 33 23 chr10 15311741 15312041 -130277247 + AluSx SINE Alu 1 303 -9 36 53 0 0 chr10 15312464 15312521 -130276767 + AT_rich Low_complexity Low_complexity 1 57 0 322 220 25 85 chr10 15313257 15313375 -130275913 - MIR SINE MIR -46 216 106 833 174 21 47 chr10 15313833 15314023 -130275265 - L1MD1 LINE L1 0 6242 6058 463 176 146 67 chr10 15316575 15316740 -130272548 + MIR SINE MIR 39 216 -46 23 0 0 0 chr10 15317156 15317179 -130272109 + AT_rich Low_complexity Low_complexity 1 23 0 198 296 99 42 chr10 15317971 15318032 -130271256 + MIR3 SINE MIR 38 94 -114 1793 122 111 7 chr10 15318032 15318311 -130270977 - AluSg1 SINE Alu -1 308 1 198 296 99 42 chr10 15318311 15318391 -130270897 + MIR3 SINE MIR 94 187 -21 207 0 0 0 chr10 15318673 15318696 -130270592 + (TAGG)n Simple_repeat Simple_repeat 1 23 0 395 290 7 39 chr10 15319009 15319164 -130270124 + MIR SINE MIR 63 212 -50 304 311 47 9 chr10 15319885 15319991 -130269297 + MIR3 SINE MIR 4 113 -95 228 265 170 41 chr10 15320372 15320519 -130268769 + MIR SINE MIR 47 212 -50 27 62 0 0 chr10 15321190 15321238 -130268050 + AT_rich Low_complexity Low_complexity 1 48 0 228 393 28 14 chr10 15321439 15321584 -130267704 + MIR3 SINE MIR 16 162 -46 1915 136 13 30 chr10 15322432 15322733 -130266555 + AluSx SINE Alu 1 296 -16 215 375 77 0 chr10 15323154 15323258 -130266030 - L2 LINE L2 -5 3267 3156 336 374 56 17 chr10 15324608 15324787 -130264501 + MIR3 SINE MIR 10 195 -13 685 176 52 0 chr10 15326679 15326815 -130262473 - MER3 DNA MER1_type 0 209 67 195 114 0 0 chr10 15327692 15327727 -130261561 + (TG)n Simple_repeat Simple_repeat 2 36 0 803 200 59 106 chr10 15328089 15328344 -130260944 - MIR SINE MIR -18 244 2 1774 170 13 3 chr10 15328470 15328770 -130260518 + AluJb SINE Alu 1 303 -9 595 324 115 34 chr10 15328909 15329535 -130259753 - L1MC4a LINE L1 -1878 5930 5254 638 254 20 46 chr10 15330630 15330827 -130258461 - MIR SINE MIR -51 211 20 376 339 138 43 chr10 15330891 15331239 -130258049 - HAL1 LINE L1 -1837 670 290 243 271 46 80 chr10 15331304 15331455 -130257833 - HAL1 LINE L1 -2341 166 21 323 261 328 5 chr10 15331493 15331688 -130257600 - L1ME LINE L1 -303 5818 5561 360 294 206 23 chr10 15331772 15332126 -130257162 - L1ME LINE L1 -1496 4650 4232 1177 268 144 30 chr10 15332143 15333144 -130256144 - L2 LINE L2 0 3313 1726 1505 154 61 0 chr10 15333257 15333503 -130255785 - AluJo SINE Alu -51 261 1 2309 92 0 0 chr10 15333624 15333919 -130255369 + AluSc SINE Alu 1 295 -14 502 108 48 0 chr10 15333923 15334006 -130255282 - AluSg/x SINE Alu -14 298 212 225 0 0 0 chr10 15336314 15336339 -130252949 + (CA)n Simple_repeat Simple_repeat 1 25 0 1815 71 4 0 chr10 15336654 15336879 -130252409 - AluY SINE Alu -7 304 79 357 82 0 0 chr10 15337009 15337058 -130252230 + (TG)n Simple_repeat Simple_repeat 2 50 0 2176 119 7 7 chr10 15337086 15337388 -130251900 - AluSx SINE Alu -10 302 1 232 206 135 76 chr10 15337711 15337853 -130251435 - MIR SINE MIR -28 180 35 717 177 0 0 chr10 15339776 15339906 -130249382 - FRAM SINE Alu -6 170 41 21 0 0 0 chr10 15340927 15340948 -130248340 + AT_rich Low_complexity Low_complexity 1 21 0 2221 89 7 10 chr10 15343871 15344173 -130245115 - AluSq SINE Alu -12 301 1 3933 149 57 34 chr10 15344348 15344431 -130244857 - L1MB8 LINE L1 0 6178 6098 2486 81 0 0 chr10 15344431 15344739 -130244549 + AluSx SINE Alu 3 310 -2 3933 149 57 34 chr10 15344739 15345625 -130243663 - L1MB8 LINE L1 -80 6098 5190 675 313 26 0 chr10 15345763 15345955 -130243333 + MIR SINE MIR 31 227 -35 358 352 156 9 chr10 15346013 15346436 -130242852 + L2 LINE L2 2043 2527 -787 202 296 0 0 chr10 15346993 15347047 -130242241 + L2 LINE L2 2798 2851 -463 380 235 47 0 chr10 15347086 15347171 -130242117 - L2 LINE L2 -5 3267 3179 189 361 73 79 chr10 15347185 15347526 -130241762 + L2 LINE L2 2899 3237 -35 494 346 75 61 chr10 15347663 15347943 -130241345 - L2 LINE L2 -4 3268 2985 205 357 62 36 chr10 15347992 15348216 -130241072 - L2 LINE L2 -518 2796 2567 490 337 99 40 chr10 15348640 15349212 -130240076 - L2 LINE L2 -1 3271 2650 189 271 205 74 chr10 15349226 15349360 -130239928 - L2 LINE L2 -1132 2182 2067 2331 93 0 7 chr10 15349360 15349661 -130239627 + AluSc SINE Alu 1 299 -10 189 271 205 74 chr10 15349661 15349828 -130239460 - L2 LINE L2 -1247 2067 1923 2338 81 7 3 chr10 15349828 15350126 -130239162 + AluSp SINE Alu 1 299 -14 189 271 205 74 chr10 15350126 15350203 -130239085 - L2 LINE L2 -1391 1923 1753 216 188 325 0 chr10 15350451 15350531 -130238757 - L2 LINE L2 -1606 1708 1603 324 298 23 30 chr10 15350622 15350753 -130238535 - L2 LINE L2 -1891 1423 1294 1490 172 107 0 chr10 15351409 15351671 -130237617 - AluJb SINE Alu -22 290 1 413 326 159 41 chr10 15352119 15352910 -130236378 - L2 LINE L2 -208 3064 2174 1710 96 4 38 chr10 15353823 15353998 -130235290 - AluSg SINE Alu -14 296 131 2628 19 6 13 chr10 15353998 15354310 -130234978 - AluY SINE Alu -1 310 1 1710 96 4 38 chr10 15354310 15354395 -130234893 - AluSg SINE Alu -179 131 45 2849 10 0 0 chr10 15355363 15355674 -130233614 - AluY SINE Alu 0 311 1 2229 99 10 10 chr10 15356170 15356483 -130232805 - AluSq SINE Alu 0 313 1 978 180 71 86 chr10 15356712 15356937 -130232351 - MER33 DNA MER1_type -2262 323 103 2119 121 3 6 chr10 15356937 15357250 -130232038 - AluSx SINE Alu 0 312 1 978 180 71 86 chr10 15357250 15357363 -130231925 - MER33 DNA MER1_type -2482 103 1 186 43 0 0 chr10 15359091 15359114 -130230174 + (TA)n Simple_repeat Simple_repeat 1 23 0 478 265 68 104 chr10 15359123 15359372 -130229916 - MIR SINE MIR -21 241 2 1557 169 8 8 chr10 15360072 15360338 -130228950 + AluJo SINE Alu 26 291 -21 382 242 75 38 chr10 15361629 15361815 -130227473 + L1MC5 LINE L1 7724 7916 -45 270 238 170 20 chr10 15362161 15362308 -130226980 - MIR3 SINE MIR -7 201 33 1383 188 74 116 chr10 15412536 15413020 -130176268 - SATR1 Satellite Satellite 0 470 7 1264 203 221 48 chr10 15413057 15413937 -130175351 - SATR1 Satellite Satellite -1 1031 1 878 227 278 3 chr10 15413965 15414296 -130174992 - SATR1 Satellite Satellite -1 469 48 1352 126 27 31 chr10 15414300 15414523 -130174765 - AluSq SINE Alu -91 222 1 694 248 40 0 chr10 15416422 15416620 -130172668 + MER6B DNA MER2_type 5 210 0 344 301 20 7 chr10 15416725 15416871 -130172417 - MER5B DNA MER1_type -6 172 25 2132 114 0 63 chr10 15417029 15417362 -130171926 - AluSp SINE Alu -1 312 1 348 238 105 35 chr10 15417367 15417510 -130171778 - HsTC2 DNA Tc2 -115 1783 1631 1404 215 2 69 chr10 15417552 15417731 -130171557 + L1MA4 LINE L1 5771 5910 -390 1683 160 4 7 chr10 15417731 15418012 -130171276 + AluSx SINE Alu 1 280 -32 1404 215 2 69 chr10 15418012 15418236 -130171052 + L1MA4 LINE L1 5910 6147 -153 1303 125 5 5 chr10 15418399 15418599 -130170689 - AluSp SINE Alu -113 200 1 2930 237 24 51 chr10 15418644 15419639 -130169649 + L1MB3 LINE L1 4818 5838 -345 2097 119 0 10 chr10 15419639 15419949 -130169339 + AluSx SINE Alu 6 312 0 2930 237 24 51 chr10 15419949 15420075 -130169213 + L1MB3 LINE L1 5838 5966 -217 1929 138 10 0 chr10 15420075 15420365 -130168923 + AluSx SINE Alu 12 304 -8 2930 237 24 51 chr10 15420365 15420612 -130168676 + L1MB3 LINE L1 5966 6151 -32 212 158 0 0 chr10 15421397 15421435 -130167853 + (ATG)n Simple_repeat Simple_repeat 3 40 0 2126 117 0 10 chr10 15422061 15422369 -130166919 + AluSg SINE Alu 1 305 -5 206 327 44 26 chr10 15422774 15422887 -130166401 + L2 LINE L2 3158 3272 0 2049 103 0 20 chr10 15422953 15423254 -130166034 - AluSc SINE Alu -14 295 1 936 220 197 29 chr10 15424950 15425360 -130163928 - SATR1 Satellite Satellite -1 478 1 1019 228 245 34 chr10 15425407 15426246 -130163042 - SATR1 Satellite Satellite -1 1015 1 869 251 271 4 chr10 15426328 15427407 -130161881 - SATR1 Satellite Satellite -144 1367 1 1469 227 112 30 chr10 15427499 15428758 -130160530 - SATR1 Satellite Satellite 0 1362 1 21 36 0 0 chr10 15428804 15428832 -130160456 + AT_rich Low_complexity Low_complexity 1 28 0 217 223 11 71 chr10 15428851 15429035 -130160253 + (TTA)n Simple_repeat Simple_repeat 3 175 0 15951 112 14 5 chr10 15429114 15431410 -130157878 + HERVE LTR ERV1 1108 3423 -4390 1280 139 5 0 chr10 15431512 15431713 -130157575 + AluSg/x SINE Alu 103 304 -6 396 0 0 0 chr10 15432180 15432224 -130157064 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 894 134 0 7 chr10 15432227 15432369 -130156919 - AluSg/x SINE Alu -26 283 143 824 133 113 0 chr10 15432425 15432576 -130156712 - AluY SINE Alu -9 302 135 1880 177 39 21 chr10 15432578 15432967 -130156321 + L1MB7 LINE L1 5700 6095 -89 2157 91 10 3 chr10 15432997 15433293 -130155995 - AluSx SINE Alu -14 298 1 1918 116 11 0 chr10 15433318 15433602 -130155686 + AluSx SINE Alu 1 287 -25 331 177 25 0 chr10 15433708 15433787 -130155501 + AluS SINE Alu 220 300 -1 1427 218 24 40 chr10 15434781 15435003 -130154285 + MLT1A1 LTR MaLR 1 216 -149 2056 109 0 23 chr10 15435003 15435306 -130153982 + AluSx SINE Alu 1 296 -16 1427 218 24 40 chr10 15435306 15435454 -130153834 + MLT1A1 LTR MaLR 216 365 0 25 31 0 0 chr10 15435619 15435651 -130153637 + AT_rich Low_complexity Low_complexity 1 32 0 246 272 43 22 chr10 15435887 15435979 -130153309 + L1ME LINE L1 5559 5652 -469 1798 129 27 7 chr10 15436126 15436421 -130152867 - AluSq SINE Alu -12 301 1 239 298 80 27 chr10 15436513 15436701 -130152587 - L1M4 LINE L1 -2235 3911 3714 351 276 20 91 chr10 15436708 15436722 -130152566 - L1M4 LINE L1 -3099 3047 3034 1850 128 21 3 chr10 15436722 15437011 -130152277 - AluSx SINE Alu -18 294 1 351 276 20 91 chr10 15437011 15437116 -130152172 - L1M4 LINE L1 -3112 3034 2923 1417 204 3 11 chr10 15437116 15437448 -130151840 - AluJo SINE Alu 0 330 1 351 276 20 91 chr10 15437448 15437580 -130151708 - L1M4 LINE L1 -3223 2923 2812 1055 257 148 42 chr10 15437802 15438291 -130150997 + MLT2F LTR ERVL 1 543 -120 265 279 47 23 chr10 15438291 15438377 -130150911 - LTR52 LTR ERVL 0 421 334 189 195 0 0 chr10 15438408 15438449 -130150839 + (CA)n Simple_repeat Simple_repeat 1 41 0 313 245 199 0 chr10 15438583 15438717 -130150571 - LTR52 LTR ERVL -240 181 13 1700 144 16 7 chr10 15438717 15439022 -130150266 + AluSx SINE Alu 1 308 -4 313 245 199 0 chr10 15439022 15439038 -130150250 - LTR52 LTR ERVL -408 13 1 231 305 48 0 chr10 15439045 15439150 -130150138 + MLT2F LTR ERVL 552 661 -2 427 247 141 59 chr10 15439151 15439406 -130149882 - L1M4 LINE L1 -3643 2503 2228 1907 107 24 0 chr10 15439431 15439721 -130149567 - AluSx SINE Alu -15 297 1 2690 13 0 0 chr10 15439755 15440060 -130149228 - AluYb8 SINE Alu -13 305 1 2151 123 0 0 chr10 15440381 15440691 -130148597 + AluSx SINE Alu 1 310 -2 1148 166 0 5 chr10 15440784 15440983 -130148305 + AluJb SINE Alu 85 282 -30 216 0 0 0 chr10 15440985 15441009 -130148279 + (CAAT)n Simple_repeat Simple_repeat 2 25 0 686 261 51 20 chr10 15441009 15441262 -130148026 + LTR16C LTR ERVL 231 491 0 810 111 0 16 chr10 15441493 15441619 -130147669 - AluJ SINE Alu -1 311 188 620 226 67 77 chr10 15441727 15442113 -130147175 + LTR15 LTR ERV1 112 596 0 817 151 157 18 chr10 15442113 15442279 -130147009 - AluJ SINE Alu -119 193 5 1953 127 3 0 chr10 15442569 15442890 -130146398 - AluSq SINE Alu 0 322 1 1879 108 46 32 chr10 15443008 15443328 -130145960 - THE1B LTR MaLR -3 372 1 2569 197 72 2 chr10 15443335 15443852 -130145436 + MER68 LTR ERV1 6 558 -4 1927 134 3 0 chr10 15444101 15444392 -130144896 - AluSx SINE Alu -19 293 2 1700 144 7 52 chr10 15444452 15444758 -130144530 + AluJo SINE Alu 7 298 -14 466 251 120 31 chr10 15444864 15445055 -130144233 - HERVL68 LTR ERVL -439 2598 2391 2040 97 17 7 chr10 15445153 15445443 -130143845 - AluSx SINE Alu -18 294 2 188 234 65 52 chr10 15445493 15445570 -130143718 - L2 LINE L2 -81 3232 3155 1818 121 6 53 chr10 15445728 15445840 -130143448 + AluSx SINE Alu 1 117 -195 3371 100 4 0 chr10 15445840 15446291 -130142997 + MLT2A2 LTR ERVL 1 453 0 1818 121 6 53 chr10 15446291 15446500 -130142788 + AluSx SINE Alu 117 307 -5 1832 136 7 14 chr10 15446728 15447023 -130142265 - AluSx SINE Alu -11 301 9 300 167 26 13 chr10 15447305 15447383 -130141905 + GA-rich Low_complexity Low_complexity 2 80 0 653 199 53 74 chr10 15447404 15447705 -130141583 - MSTD LTR MaLR 0 396 103 2147 108 3 0 chr10 15448109 15448406 -130140882 - AluSq SINE Alu -15 298 1 402 260 12 82 chr10 15448897 15449034 -130140254 + MER5A DNA MER1_type 8 142 -47 1954 108 10 10 chr10 15449034 15449329 -130139959 + AluSg SINE Alu 1 295 -15 402 260 12 82 chr10 15449329 15449374 -130139914 + MER5A DNA MER1_type 142 189 0 1248 176 10 80 chr10 15450060 15450236 -130139052 - AluJo SINE Alu -31 281 133 1998 134 0 13 chr10 15450236 15450542 -130138746 + AluSx SINE Alu 1 302 -10 1248 176 10 80 chr10 15450542 15450667 -130138621 - AluJo SINE Alu -179 133 1 208 284 95 21 chr10 15450790 15450885 -130138403 + L2 LINE L2 2909 3010 -262 * 249 213 0 0 chr10 15450873 15450920 -130138368 - L2 LINE L2 -1 3312 3266 2038 75 4 4 chr10 15451108 15451374 -130137914 - AluSg SINE Alu -8 302 37 257 253 229 41 chr10 15451963 15452133 -130137155 - MIR SINE MIR -13 249 48 2011 128 3 0 chr10 15452543 15452855 -130136433 + AluSq SINE Alu 1 313 0 237 310 0 0 chr10 15454337 15454408 -130134880 - L2 LINE L2 -65 3248 3178 195 380 47 18 chr10 15454752 15454858 -130134430 + L2 LINE L2 1873 1974 -1340 2259 96 3 3 chr10 15454858 15455171 -130134117 - AluSp SINE Alu 0 313 1 2039 121 0 3 chr10 15455172 15455470 -130133818 - AluSx SINE Alu -15 297 1 195 380 47 18 chr10 15455470 15455635 -130133653 + L2 LINE L2 1973 2154 -1160 2173 110 0 3 chr10 15455745 15456046 -130133242 - AluSq SINE Alu -13 300 1 1228 93 44 6 chr10 15456046 15456223 -130133065 - L1MA1 LINE L1 -47 6255 6072 221 361 23 15 chr10 15456226 15456356 -130132932 + L2 LINE L2 2458 2588 -726 507 254 51 74 chr10 15456359 15456443 -130132845 + MIR SINE MIR 2 86 -176 2457 58 0 10 chr10 15456443 15456753 -130132535 - AluY SINE Alu -4 307 1 507 254 51 74 chr10 15456753 15456885 -130132403 + MIR SINE MIR 86 213 -49 1807 122 44 10 chr10 15457060 15457356 -130131932 - AluSq SINE Alu -2 311 6 441 271 57 32 chr10 15457638 15457885 -130131403 - L1MEc LINE L1 -3904 2636 2384 23 0 0 0 chr10 15458015 15458038 -130131250 + AT_rich Low_complexity Low_complexity 1 23 0 490 157 0 34 chr10 15458038 15458127 -130131161 - AluSg/x SINE Alu -5 304 219 722 280 70 24 chr10 15458131 15458644 -130130644 - L1MEc LINE L1 -4474 2107 1522 1601 131 0 4 chr10 15459403 15459647 -130129641 + AluSx SINE Alu 63 305 -7 1647 112 116 8 chr10 15459657 15459947 -130129341 + AluSg SINE Alu 1 318 0 1633 113 4 4 chr10 15460059 15460299 -130128989 - AluSx SINE Alu -10 302 63 218 286 12 24 chr10 15460629 15460713 -130128575 + CT-rich Low_complexity Low_complexity 2 84 0 1753 117 10 38 chr10 15461020 15461310 -130127978 + AluSx SINE Alu 15 296 -16 1989 133 0 0 chr10 15461809 15462111 -130127177 - AluSx SINE Alu -10 302 1 1751 140 14 4 chr10 15462415 15462694 -130126594 + AluSp SINE Alu 1 282 -31 180 0 0 0 chr10 15462694 15462714 -130126574 + (T)n Simple_repeat Simple_repeat 1 20 0 1359 225 4 0 chr10 15462745 15463021 -130126267 - AluJo SINE Alu -30 282 6 400 212 51 8 chr10 15463587 15463705 -130125583 - L1MEc LINE L1 -4129 2267 2145 830 126 0 0 chr10 15463731 15463850 -130125438 + FLAM_C SINE Alu 3 121 -22 1860 130 0 0 chr10 15463859 15464135 -130125153 - AluSx SINE Alu -10 302 27 2295 70 3 3 chr10 15464135 15464434 -130124854 - AluY SINE Alu -10 301 1 299 143 0 0 chr10 15464434 15464476 -130124812 - AluSx SINE Alu -259 42 1 277 229 0 12 chr10 15464530 15464613 -130124675 - L1MEc LINE L1 -4282 2114 2033 1483 88 0 0 chr10 15464654 15464867 -130124421 - AluSg/x SINE Alu 0 315 103 377 297 129 7 chr10 15465253 15465408 -130123880 - HAL1b LINE L1 -541 807 634 855 227 23 59 chr10 15465409 15465594 -130123694 - MER58A DNA MER1_type -2196 224 47 2025 133 3 3 chr10 15465594 15465896 -130123392 + AluSx SINE Alu 1 302 -10 855 227 23 59 chr10 15465896 15465930 -130123358 - MER58A DNA MER1_type -2373 47 13 807 177 0 0 chr10 15466041 15466165 -130123123 - FLAM_C SINE Alu -18 125 2 352 360 143 15 chr10 15466226 15466318 -130122970 - HAL1b LINE L1 -895 453 374 2047 98 6 44 chr10 15466318 15466634 -130122654 - AluSx SINE Alu -8 304 1 352 360 143 15 chr10 15466634 15466744 -130122544 - HAL1b LINE L1 -974 374 225 3845 152 24 61 chr10 15466744 15467310 -130121978 + MER50 LTR ERV1 1 586 -148 1500 162 16 65 chr10 15467310 15467619 -130121669 - AluJb SINE Alu -14 298 5 3845 152 24 61 chr10 15467619 15467633 -130121655 + MER50 LTR ERV1 586 599 -135 2131 113 0 7 chr10 15467633 15467934 -130121354 - AluSx SINE Alu -13 299 1 3845 152 24 61 chr10 15467934 15468090 -130121198 + MER50 LTR ERV1 599 711 -23 1362 119 0 5 chr10 15468550 15468752 -130120536 - AluSg/x SINE Alu -4 308 108 2019 121 0 0 chr10 15469444 15469724 -130119564 - AluSx SINE Alu -14 298 19 871 274 52 16 chr10 15469759 15470065 -130119223 - L1ME LINE L1 -366 5873 5557 217 71 0 48 chr10 15470182 15470224 -130119064 + (TTCC)n Simple_repeat Simple_repeat 1 40 0 1449 183 44 24 chr10 15470224 15470389 -130118899 - AluJb SINE Alu -11 301 126 180 0 0 0 chr10 15470389 15470409 -130118879 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 1449 183 44 24 chr10 15470409 15470538 -130118750 - AluJb SINE Alu -186 126 1 664 273 69 62 chr10 15470538 15470988 -130118300 - L1ME LINE L1 -865 5350 4894 1854 142 42 0 chr10 15470988 15471276 -130118012 - AluSx SINE Alu -10 302 3 664 273 69 62 chr10 15471276 15471345 -130117943 - L1ME LINE L1 -1321 4894 4827 1334 229 89 10 chr10 15471377 15471778 -130117510 - L1 LINE L1 -1265 4881 4457 1023 193 0 30 chr10 15471788 15471985 -130117303 - AluJo SINE Alu -121 191 1 886 267 65 67 chr10 15471985 15472464 -130116824 - L1ME LINE L1 -4341 2055 1578 860 138 0 28 chr10 15472510 15472691 -130116597 + (TCCC)n Simple_repeat Simple_repeat 4 179 0 2039 118 3 3 chr10 15473706 15474002 -130115286 - AluSx SINE Alu -16 296 1 1621 192 27 30 chr10 15474392 15474526 -130114762 - MER58B DNA MER1_type -2083 337 204 1663 191 0 26 chr10 15474526 15474835 -130114453 + AluJo SINE Alu 1 301 -11 1621 192 27 30 chr10 15474835 15475038 -130114250 - MER58B DNA MER1_type -2216 204 1 2258 92 3 10 chr10 15475167 15475462 -130113826 - AluSx SINE Alu -19 293 1 2454 63 3 10 chr10 15475892 15476192 -130113096 - AluSc SINE Alu -11 298 1 2132 91 14 14 chr10 15477014 15477325 -130111963 + AluSx SINE Alu 15 312 0 2020 123 0 4 chr10 15477697 15477973 -130111315 + AluSx SINE Alu 1 275 -37 1498 161 13 79 chr10 15478040 15478357 -130110931 + AluJb SINE Alu 1 296 -16 2114 129 3 16 chr10 15478488 15478799 -130110489 - AluSx SINE Alu -5 307 1 415 269 34 0 chr10 15478934 15479053 -130110235 + AluSq/x SINE Alu 2 124 -179 189 0 0 0 chr10 15479592 15479613 -130109675 + (A)n Simple_repeat Simple_repeat 1 21 0 513 97 0 0 chr10 15479927 15479999 -130109289 - MSTB LTR MaLR 0 426 355 2243 127 3 13 chr10 15479999 15480313 -130108975 + AluSx SINE Alu 1 311 -1 23 78 0 0 chr10 15480342 15480393 -130108895 + AT_rich Low_complexity Low_complexity 1 51 0 180 0 0 0 chr10 15480566 15480586 -130108702 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 1423 127 0 0 chr10 15480599 15480788 -130108500 - AluSg/x SINE Alu -27 285 97 387 0 0 0 chr10 15480945 15480988 -130108300 + (TA)n Simple_repeat Simple_repeat 2 44 0 2311 104 19 3 chr10 15480992 15481299 -130107989 - AluSx SINE Alu 0 312 1 2204 93 21 3 chr10 15481975 15482264 -130107024 + AluSg SINE Alu 17 310 0 261 0 0 0 chr10 15483213 15483242 -130106046 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 354 292 130 23 chr10 15483274 15483490 -130105798 + L1M4 LINE L1 3520 3758 -2388 2043 129 7 10 chr10 15483491 15483794 -130105494 + AluSx SINE Alu 1 302 -10 3577 244 62 16 chr10 15483818 15485603 -130103685 + L1ME LINE L1 1930 3796 -2744 2629 259 41 6 chr10 15485703 15486492 -130102796 + L1ME LINE L1 4407 5222 -1318 2341 96 0 3 chr10 15486541 15486844 -130102444 + AluSq SINE Alu 1 302 -11 461 268 147 30 chr10 15486880 15487169 -130102119 + L1ME LINE L1 5708 6025 -535 1869 227 26 12 chr10 15487185 15487603 -130101685 + Charlie1a DNA MER1_type 2 425 -1030 429 202 20 0 chr10 15487864 15487963 -130101325 + MER5A DNA MER1_type 9 109 -80 1850 149 8 69 chr10 15488237 15488465 -130100823 - MER2 DNA MER2_type 0 344 145 2124 129 0 0 chr10 15488465 15488760 -130100528 + AluSx SINE Alu 5 299 -13 1850 149 8 69 chr10 15488760 15488893 -130100395 - MER2 DNA MER2_type -199 145 5 25 0 0 0 chr10 15489527 15489552 -130099736 + AT_rich Low_complexity Low_complexity 1 25 0 2274 97 3 0 chr10 15489662 15489952 -130099336 - AluSq SINE Alu -22 291 1 752 128 7 68 chr10 15490666 15490709 -130098579 - Charlie1 DNA MER1_type 0 2761 2717 2143 129 0 7 chr10 15490709 15491004 -130098284 - AluY SINE Alu -18 293 1 752 128 7 68 chr10 15491004 15491108 -130098180 - Charlie1 DNA MER1_type -44 2717 2623 679 215 58 70 chr10 15491126 15491298 -130097990 - Charlie1 DNA MER1_type -2590 171 2 2213 87 55 0 chr10 15491551 15491840 -130097448 + AluSc SINE Alu 2 306 -3 226 284 136 25 chr10 15492629 15492791 -130096497 + MIR SINE MIR 62 241 -21 206 194 137 93 chr10 15493305 15493444 -130095844 + MIR3 SINE MIR 2 146 -62 * 414 179 32 11 chr10 15493414 15493509 -130095779 + MIR SINE MIR 116 212 -50 216 0 0 0 chr10 15493914 15493938 -130095350 + (TATG)n Simple_repeat Simple_repeat 3 26 0 347 103 0 17 chr10 15493943 15494001 -130095287 + (TCCCC)n Simple_repeat Simple_repeat 3 59 0 1698 148 15 11 chr10 15494022 15494293 -130094995 - AluJb SINE Alu -39 273 2 1499 260 48 40 chr10 15494308 15494330 -130094958 - L1MEc LINE L1 -4868 1528 1508 2103 142 0 3 chr10 15494330 15494639 -130094649 + AluSx SINE Alu 1 308 -4 1499 260 48 40 chr10 15494639 15494975 -130094313 - L1MEc LINE L1 -4888 1508 1176 2138 136 0 3 chr10 15494975 15495277 -130094011 - AluSx SINE Alu -11 301 1 1499 260 48 40 chr10 15495277 15495751 -130093537 - L1MEc LINE L1 -5220 1176 688 545 298 59 99 chr10 15495739 15496363 -130092925 - L1MEc LINE L1 -5444 761 163 * 399 247 195 11 chr10 15496988 15497178 -130092110 + MIR SINE MIR 37 261 -1 255 245 111 96 chr10 15497212 15497546 -130091742 - L1ME4a LINE L1 -76 6045 5717 1977 173 0 0 chr10 15497546 15497846 -130091442 - AluSx SINE Alu -12 300 1 255 245 111 96 chr10 15497846 15497944 -130091344 - L1ME4a LINE L1 -404 5717 5603 1710 170 7 20 chr10 15497944 15498238 -130091050 - AluJb SINE Alu -22 290 1 255 245 111 96 chr10 15498238 15498273 -130091015 - L1ME4a LINE L1 -518 5603 5570 2445 209 24 14 chr10 15498400 15498907 -130090381 - Charlie1b DNA MER1_type -9 514 3 479 101 0 112 chr10 15499434 15499472 -130089816 + MADE1 DNA Mariner 2 26 -54 2181 120 3 0 chr10 15499472 15499764 -130089524 - AluSx SINE Alu -19 293 1 479 101 0 112 chr10 15499764 15499814 -130089474 + MADE1 DNA Mariner 26 80 0 2031 157 0 0 chr10 15500766 15501065 -130088223 + AluSx SINE Alu 1 299 -13 2212 107 3 0 chr10 15501406 15501746 -130087542 - AluSx SINE Alu 0 312 2 1144 156 69 9 chr10 15501747 15501978 -130087310 + L1MA7 LINE L1 6047 6291 0 2849 269 88 45 chr10 15502851 15503319 -130085969 - L1MCc LINE L1 -4888 1535 1089 2232 87 0 11 chr10 15503319 15503606 -130085682 - AluSq SINE Alu -27 286 3 2849 269 88 45 chr10 15503606 15504497 -130084791 - L1MCc LINE L1 -5334 1089 345 2144 129 3 0 chr10 15504497 15504799 -130084489 + AluSx SINE Alu 1 303 -9 2849 269 88 45 chr10 15504799 15505093 -130084195 - L1MCc LINE L1 -6078 345 65 2081 118 14 0 chr10 15505393 15505690 -130083598 - AluSp SINE Alu -9 304 4 2079 146 10 0 chr10 15505693 15505995 -130083293 - AluJo SINE Alu -7 305 1 289 280 75 9 chr10 15506198 15506305 -130082983 + L2 LINE L2 3118 3231 -41 2401 91 0 0 chr10 15506848 15507144 -130082144 - AluSg SINE Alu -14 296 1 301 48 0 0 chr10 15507161 15507203 -130082085 - L1MA3 LINE L1 0 6305 6264 2541 142 20 65 chr10 15507365 15507874 -130081414 - LTR19A LTR ERV1 0 486 1 2304 59 0 0 chr10 15508322 15508592 -130080696 + AluY SINE Alu 32 301 -10 1533 157 80 11 chr10 15509169 15509443 -130079845 + AluJo SINE Alu 1 293 -19 2254 97 0 7 chr10 15509687 15509976 -130079312 + AluSx SINE Alu 1 287 -25 1701 160 87 47 chr10 15510314 15510604 -130078684 - L1MD1 LINE L1 0 6242 5932 2115 148 0 0 chr10 15510604 15510915 -130078373 + AluSx SINE Alu 1 311 -1 1701 160 87 47 chr10 15510915 15511005 -130078283 - L1MD1 LINE L1 -310 5932 5847 2224 117 3 3 chr10 15511416 15511715 -130077573 - AluSx SINE Alu -13 299 1 4111 104 30 69 chr10 15511842 15512513 -130076775 + L1PB4 LINE L1 5475 6118 -38 2094 108 44 0 chr10 15512513 15512809 -130076479 + AluSx SINE Alu 1 309 -3 4111 104 30 69 chr10 15512809 15512846 -130076442 + L1PB4 LINE L1 6118 6155 -1 2348 60 3 30 chr10 15512977 15513306 -130075982 + AluSp SINE Alu 15 313 0 2319 88 0 7 chr10 15513343 15513638 -130075650 + AluSx SINE Alu 11 303 -9 1687 196 129 39 chr10 15513638 15514071 -130075217 + MLT1E LTR MaLR 122 593 0 2324 101 0 13 chr10 15514139 15514446 -130074842 + AluSg SINE Alu 1 303 -7 2367 69 3 20 chr10 15514455 15514758 -130074530 + AluY SINE Alu 2 299 -12 21 36 0 0 chr10 15514765 15514793 -130074495 + AT_rich Low_complexity Low_complexity 1 28 0 2106 117 17 0 chr10 15514809 15515100 -130074188 + AluSx SINE Alu 2 297 -15 2248 102 7 10 chr10 15515910 15516213 -130073075 + AluSx SINE Alu 1 302 -10 1850 100 4 0 chr10 15516877 15517117 -130072171 + AluSg SINE Alu 62 302 -8 1820 166 13 3 chr10 15517613 15517921 -130071367 + AluJb SINE Alu 1 311 -1 2175 131 0 13 chr10 15517967 15518280 -130071008 - AluSg SINE Alu -1 309 1 800 160 15 0 chr10 15518506 15518637 -130070651 - FLAM_C SINE Alu 0 133 1 2145 122 3 7 chr10 15519060 15519355 -130069933 - AluSx SINE Alu -18 294 1 455 189 102 2 chr10 15519475 15519593 -130069695 - L1MC1 LINE L1 -6 6327 6207 2343 100 3 3 chr10 15519599 15519908 -130069380 - AluSq SINE Alu -4 309 1 2001 144 10 13 chr10 15520763 15521068 -130068220 - AluJo SINE Alu -8 304 1 204 343 14 0 chr10 15521303 15521376 -130067912 + L2 LINE L2 2530 2603 -711 1945 127 3 17 chr10 15521880 15522171 -130067117 + AluJb SINE Alu 1 287 -25 288 0 0 0 chr10 15522373 15522405 -130066883 + (TTG)n Simple_repeat Simple_repeat 2 33 0 489 177 5 48 chr10 15523041 15523133 -130066155 + GA-rich Low_complexity Low_complexity 3 85 -95 1960 101 26 4 chr10 15523133 15523400 -130065888 + AluSq SINE Alu 9 281 -32 489 177 5 48 chr10 15523400 15523493 -130065795 + GA-rich Low_complexity Low_complexity 85 180 0 218 256 0 0 chr10 15523493 15523536 -130065752 + polypurine Low_complexity Low_complexity 2 44 0 536 199 19 6 chr10 15523537 15523698 -130065590 + GA-rich Low_complexity Low_complexity 2 164 0 2209 138 0 0 chr10 15525179 15525491 -130063797 - AluSx SINE Alu 0 312 1 3431 54 42 2 chr10 15526044 15526431 -130062857 + MLT2A1 LTR ERVL 1 408 -36 459 52 0 0 chr10 15526431 15526489 -130062799 + (TCTA)n Simple_repeat Simple_repeat 3 60 0 3431 54 42 2 chr10 15526489 15526528 -130062760 + MLT2A1 LTR ERVL 408 444 0 423 0 0 0 chr10 15527044 15527091 -130062197 + (TA)n Simple_repeat Simple_repeat 1 47 0 204 40 0 0 chr10 15527305 15527330 -130061958 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 1767 127 4 4 chr10 15527336 15527604 -130061684 - AluJb SINE Alu -44 268 1 1027 163 0 0 chr10 15527696 15527862 -130061426 - FRAM SINE Alu 0 166 1 215 211 0 0 chr10 15528676 15528714 -130060574 + polypyrimidine Low_complexity Low_complexity 2 39 0 1545 156 31 21 chr10 15529461 15529750 -130059538 + AluJb SINE Alu 5 296 -16 197 329 61 12 chr10 15530200 15530282 -130059006 + L2 LINE L2 3187 3272 0 182 333 0 0 chr10 15530393 15530438 -130058850 - L2 LINE L2 -14 3299 3255 1776 139 24 17 chr10 15530756 15531044 -130058244 + AluJo SINE Alu 1 290 -22 3278 201 18 28 chr10 15531584 15531631 -130057657 + L1MB8 LINE L1 5444 5490 -688 2420 64 0 0 chr10 15531631 15531928 -130057360 + AluY SINE Alu 1 297 -14 3278 201 18 28 chr10 15531928 15532552 -130056736 + L1MB8 LINE L1 5490 6110 -68 2046 139 0 0 chr10 15532552 15532861 -130056427 - AluSx SINE Alu -3 309 1 3278 201 18 28 chr10 15532861 15532910 -130056378 + L1MB8 LINE L1 6110 6158 -20 897 241 120 34 chr10 15533581 15533971 -130055317 + MLT1J2 LTR MaLR 28 511 0 1765 156 6 16 chr10 15533992 15534307 -130054981 + AluJo SINE Alu 1 312 0 545 311 52 44 chr10 15534607 15534877 -130054411 + L1 LINE L1 4763 5034 -1112 384 280 70 10 chr10 15534878 15534978 -130054310 + L2 LINE L2 3208 3313 0 735 300 9 26 chr10 15535274 15535405 -130053883 + MIR SINE MIR 34 161 -101 1744 141 7 27 chr10 15535405 15535704 -130053584 + AluJo SINE Alu 1 293 -19 735 300 9 26 chr10 15535704 15535805 -130053483 + MIR SINE MIR 161 262 0 407 238 147 35 chr10 15535830 15535973 -130053315 + L2 LINE L2 3153 3311 -2 357 301 24 16 chr10 15535981 15536104 -130053184 + L1M LINE L1 5282 5405 -2403 2109 217 110 12 chr10 15536359 15538126 -130051162 + SATR1 Satellite Satellite 1 1938 -20 14958 89 12 18 chr10 15538126 15540182 -130049106 - HERVE LTR ERV1 -2648 5165 3122 320 309 12 0 chr10 15540588 15540672 -130048616 - L2 LINE L2 -8 3305 3221 1852 123 0 11 chr10 15540696 15540973 -130048315 + AluSx SINE Alu 1 274 -38 216 0 0 0 chr10 15540980 15541004 -130048284 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 2285 100 0 0 chr10 15541401 15541710 -130047578 + AluSx SINE Alu 2 310 -2 2062 90 0 61 chr10 15541961 15542273 -130047015 - AluSx SINE Alu -19 293 1 2185 71 3 7 chr10 15542632 15542926 -130046362 - AluSg SINE Alu -2 308 16 1605 186 86 19 chr10 15543120 15543481 -130045807 - MSTB LTR MaLR 0 426 42 195 259 19 0 chr10 15543775 15543829 -130045459 - MIR SINE MIR -72 136 82 25 0 0 0 chr10 15544026 15544051 -130045237 + AT_rich Low_complexity Low_complexity 1 25 0 1893 134 3 10 chr10 15544056 15544347 -130044941 + AluSq SINE Alu 1 289 -24 1400 151 23 19 chr10 15544349 15544608 -130044680 - AluJo SINE Alu -30 282 23 2017 131 0 6 chr10 15544639 15544951 -130044337 + AluSg SINE Alu 1 310 0 400 184 0 0 chr10 15545005 15545081 -130044207 + L1MEc LINE L1 2039 2114 -4282 2166 96 0 0 chr10 15545139 15545431 -130043857 + AluSx SINE Alu 1 292 -20 3172 83 2 2 chr10 15545839 15546246 -130043042 + THE1B-int LTR MaLR 1174 1580 0 2259 152 6 20 chr10 15546251 15546607 -130042681 + THE1B LTR MaLR 14 364 0 1480 195 0 20 chr10 15546781 15547078 -130042210 + AluJo SINE Alu 1 291 -21 2060 125 3 0 chr10 15547136 15547432 -130041856 + AluSq SINE Alu 1 297 -16 2987 53 24 0 chr10 15548478 15548853 -130040435 - L1PA7 LINE L1 -1 6153 5770 39 54 0 32 chr10 15549356 15549449 -130039839 + AT_rich Low_complexity Low_complexity 1 90 0 1860 130 0 17 chr10 15549793 15550093 -130039195 - AluJb SINE Alu -8 304 10 2082 106 0 0 chr10 15550112 15550404 -130038884 - AluSg SINE Alu -18 292 1 2075 127 0 0 chr10 15550825 15551125 -130038163 + AluSx SINE Alu 1 300 -12 3921 119 75 18 chr10 15551626 15552250 -130037038 + PABL_A LTR ERV1 1 660 0 432 187 13 0 chr10 15552457 15552532 -130036756 + MIR SINE MIR 15 90 -172 2179 94 13 0 chr10 15552533 15552831 -130036457 + AluSx SINE Alu 1 302 -10 2082 123 3 3 chr10 15553282 15553592 -130035696 + AluSx SINE Alu 1 310 -2 1883 138 10 7 chr10 15554019 15554310 -130034978 - AluSx SINE Alu -20 292 1 228 241 161 45 chr10 15554383 15554495 -130034793 - L2 LINE L2 -10 3262 3138 3715 89 109 42 chr10 15554944 15555538 -130033750 - MER51A LTR ERV1 0 634 1 2190 102 3 0 chr10 15556553 15556847 -130032441 + AluSx SINE Alu 1 295 -17 1812 141 0 17 chr10 15557121 15557259 -130032029 + AluJo SINE Alu 1 140 -172 2263 93 3 0 chr10 15557259 15557559 -130031729 + AluSp SINE Alu 1 301 -12 1812 141 0 17 chr10 15557559 15557719 -130031569 + AluJo SINE Alu 140 294 -18 444 251 263 6 chr10 15557745 15557924 -130031364 - MIR SINE MIR -15 247 23 1955 122 0 3 chr10 15558022 15558308 -130030980 + AluSx SINE Alu 1 285 -27 317 111 0 0 chr10 15558308 15558353 -130030935 + Alu SINE Alu 250 294 -6 994 128 0 87 chr10 15558353 15558549 -130030739 + AluSg/x SINE Alu 119 297 -13 381 253 78 60 chr10 15558549 15558818 -130030470 + L1ME4a LINE L1 5820 6093 -28 276 130 0 0 chr10 15559596 15559642 -130029646 + (GA)n Simple_repeat Simple_repeat 1 46 0 50 58 0 10 chr10 15559720 15559764 -130029524 + AT_rich Low_complexity Low_complexity 1 44 -58 2366 67 3 0 chr10 15559764 15560061 -130029227 + AluSp SINE Alu 1 298 -15 50 58 0 10 chr10 15560061 15560119 -130029169 + AT_rich Low_complexity Low_complexity 44 102 0 75 51 0 0 chr10 15560141 15560258 -130029030 + AT_rich Low_complexity Low_complexity 1 117 0 619 103 9 95 chr10 15560261 15560377 -130028911 - FLAM_C SINE Alu -11 132 27 1823 133 7 3 chr10 15561365 15561685 -130027603 + AluJb SINE Alu 1 321 0 350 203 0 13 chr10 15561693 15561772 -130027516 - L1 LINE L1 -1494 4652 4575 307 248 66 91 chr10 15561790 15561911 -130027377 - MER5B DNA MER1_type -6 172 55 198 48 24 48 chr10 15562136 15562178 -130027110 + (TTTTC)n Simple_repeat Simple_repeat 1 41 0 198 261 198 0 chr10 15562191 15562227 -130027061 + L2 LINE L2 2915 2943 -329 2121 129 0 0 chr10 15562227 15562536 -130026752 - AluSx SINE Alu -3 309 1 198 261 198 0 chr10 15562536 15562610 -130026678 + L2 LINE L2 2943 3047 -225 331 273 172 16 chr10 15562665 15562900 -130026388 + L2 LINE L2 2828 3127 -186 2183 123 0 0 chr10 15562900 15563209 -130026079 - AluSx SINE Alu -3 309 1 331 273 172 16 chr10 15563209 15563292 -130025996 + L2 LINE L2 3127 3196 -117 331 257 44 9 chr10 15563434 15563547 -130025741 + REP3 LTR ERV 9 125 -437 198 0 0 0 chr10 15563564 15563586 -130025702 + (T)n Simple_repeat Simple_repeat 1 22 0 266 254 71 154 chr10 15564142 15564453 -130024835 + REP3 LTR ERV 178 462 -100 408 20 0 0 chr10 15564644 15564693 -130024595 + (CA)n Simple_repeat Simple_repeat 2 50 0 357 125 0 0 chr10 15564954 15565010 -130024278 + (CAT)n Simple_repeat Simple_repeat 1 56 0 1068 136 0 0 chr10 15565011 15565187 -130024101 + (CACCAT)n Simple_repeat Simple_repeat 1 176 0 1045 232 52 40 chr10 15565206 15565456 -130023832 - MIR SINE MIR -9 253 1 228 225 25 12 chr10 15565478 15565558 -130023730 - L1M LINE L1 -2411 5397 5317 2173 94 7 0 chr10 15566640 15566937 -130022351 - AluSp SINE Alu -14 299 1 2238 102 0 3 chr10 15567323 15567627 -130021661 + AluSx SINE Alu 1 303 -9 229 284 30 0 chr10 15568288 15568355 -130020933 - MIR SINE MIR -68 140 72 459 271 25 13 chr10 15568431 15568599 -130020689 + L1MC/D LINE L1 5634 5810 -311 501 67 56 56 chr10 15568612 15568701 -130020587 - LTR9 LTR ERV1 -86 526 438 546 143 105 83 chr10 15568731 15568864 -130020424 + AluJo SINE Alu 1 136 -176 2219 49 7 14 chr10 15569213 15569531 -130019757 - AluY SINE Alu 0 316 1 233 256 138 59 chr10 15569546 15569800 -130019488 - MLT1J LTR MaLR -2 509 236 346 250 12 0 chr10 15570025 15570105 -130019183 - Tigger7 DNA MER2_type 0 2487 2407 1780 151 0 50 chr10 15570945 15571262 -130018026 - AluJo SINE Alu -11 301 1 2219 180 84 0 chr10 15571274 15571691 -130017597 - Tigger7 DNA MER2_type -273 460 9 2425 136 8 8 chr10 15571691 15572065 -130017223 + THE1C LTR MaLR 1 374 -1 2264 78 3 0 chr10 15572196 15572490 -130016798 + AluSg SINE Alu 1 295 -15 2160 99 3 3 chr10 15573612 15573915 -130015373 + AluSq SINE Alu 1 303 -10 728 127 42 35 chr10 15574269 15574411 -130014877 - MLT1A2 LTR MaLR 0 374 232 667 186 28 28 chr10 15574440 15574585 -130014703 - MLT1A2 LTR MaLR -214 151 7 1758 94 17 74 chr10 15574976 15575306 -130013982 - AluSx SINE Alu 0 314 2 1914 130 7 10 chr10 15776000 15776308 -129812980 - AluSx SINE Alu -5 307 1 1340 141 38 55 chr10 15776863 15777154 -129812134 + AluSx SINE Alu 1 286 -16 274 132 44 15 chr10 15777470 15777538 -129811750 + L1ME4a LINE L1 5990 6059 -62 549 250 98 27 chr10 15778206 15778380 -129810908 - MIR SINE MIR -29 233 44 1556 161 0 40 chr10 15778380 15778703 -129810585 - AluSx SINE Alu -2 310 1 1676 159 14 7 chr10 15779783 15780091 -129809197 + AluJb SINE Alu 1 312 0 434 306 8 8 chr10 15780308 15780429 -129808859 + MIR3 SINE MIR 41 161 -47 1782 113 32 68 chr10 15780706 15781015 -129808273 - AluSg SINE Alu -12 298 1 2131 115 3 3 chr10 15782304 15782608 -129806680 - AluSq SINE Alu -9 304 1 220 91 45 0 chr10 15783772 15783816 -129805472 + CT-rich Low_complexity Low_complexity 1 46 0 205 304 0 32 chr10 15783870 15783995 -129805293 + T-rich Low_complexity Low_complexity 4 124 0 225 181 14 28 chr10 15783999 15784071 -129805217 + CT-rich Low_complexity Low_complexity 2 72 0 331 262 36 95 chr10 15784184 15784405 -129804883 + L1ME LINE L1 780 987 -5083 2329 90 7 0 chr10 15786051 15786361 -129802927 - AluSq SINE Alu -1 312 1 209 277 0 0 chr10 15786716 15786763 -129802525 - MIR3 SINE MIR -50 158 112 1902 117 0 0 chr10 15788467 15788740 -129800548 - AluSx SINE Alu -1 311 39 327 250 28 40 chr10 15790033 15790209 -129799079 + (CCCCG)n Simple_repeat Simple_repeat 1 174 0 1594 161 28 7 chr10 15790542 15790833 -129798455 + AluJo SINE Alu 1 297 -15 217 270 32 0 chr10 15791560 15791623 -129797665 - L2 LINE L2 -4 3309 3245 706 168 90 0 chr10 15792228 15792383 -129796905 + MER53 DNA DNA 1 169 -20 1160 150 26 30 chr10 15792383 15792616 -129796672 - AluJo SINE Alu -16 296 65 261 178 53 12 chr10 15793111 15793192 -129796096 - AluJo SINE Alu -6 296 246 289 250 15 0 chr10 15793446 15793514 -129795774 - L2 LINE L2 -4 3309 3241 911 166 0 41 chr10 15793603 15793772 -129795516 - AluJo SINE Alu -64 248 87 365 252 50 36 chr10 15793772 15793911 -129795377 - MER5B DNA MER1_type -36 142 2 1912 127 7 3 chr10 15794367 15794651 -129794637 - AluSx SINE Alu -27 285 1 280 263 222 10 chr10 15794872 15794971 -129794317 + MER5A DNA MER1_type 47 166 -23 2707 204 93 30 chr10 15796697 15796827 -129792461 + L1MC3 LINE L1 6994 7114 -671 2229 123 33 36 chr10 15796827 15797192 -129792096 + THE1B LTR MaLR 1 364 0 2707 204 93 30 chr10 15797192 15797806 -129791482 + L1MC3 LINE L1 7114 7785 0 1920 106 31 10 chr10 15797900 15798192 -129791096 + AluSx SINE Alu 1 298 -14 2047 108 3 7 chr10 15798970 15799265 -129790023 - AluSx SINE Alu -13 299 6 353 173 28 123 chr10 15799275 15799481 -129789807 - AluSg SINE Alu -132 168 1 1613 80 13 0 chr10 15799802 15800027 -129789261 + AluSq SINE Alu 86 313 0 182 207 35 86 chr10 15800100 15800158 -129789130 - MER5C DNA MER1_type -267 57 3 385 281 74 7 chr10 15800588 15800723 -129788565 + MIR SINE MIR 7 150 -112 244 86 0 0 chr10 15801868 15801903 -129787385 - AluSx SINE Alu -6 294 260 1500 111 13 9 chr10 15801906 15802132 -129787156 - AluSx SINE Alu -85 227 1 1777 145 11 0 chr10 15803208 15803490 -129785798 + AluJb SINE Alu 3 287 -25 1103 107 0 0 chr10 15803746 15803895 -129785393 + AluSq/x SINE Alu 1 149 -163 441 62 0 62 chr10 15804026 15804117 -129785171 - AluSp/q SINE Alu 0 313 233 874 130 0 0 chr10 15804119 15804250 -129785038 + AluSg/x SINE Alu 170 300 -10 1595 151 34 31 chr10 15804606 15804898 -129784390 + AluJo SINE Alu 3 295 -17 2236 98 3 3 chr10 15805041 15805348 -129783940 - AluSq SINE Alu -6 307 1 180 266 101 25 chr10 15805638 15805717 -129783571 - L3 LINE CR1 -60 1517 1433 2112 107 0 3 chr10 15806046 15806344 -129782944 + AluSx SINE Alu 2 298 -14 1472 181 41 0 chr10 15807022 15807315 -129781973 - AluJo SINE Alu -7 305 1 402 174 0 47 chr10 15807583 15807669 -129781619 - MER74A LTR ERVL 0 558 477 1903 114 24 10 chr10 15807673 15807963 -129781325 + AluSx SINE Alu 1 294 -18 2051 200 37 29 chr10 15807999 15808483 -129780805 - MER74A LTR ERVL -70 488 1 195 259 17 35 chr10 15808542 15808600 -129780688 + MIR3 SINE MIR 119 175 -33 46 45 0 0 chr10 15809429 15809496 -129779792 + AT_rich Low_complexity Low_complexity 1 67 0 2271 86 0 0 chr10 15809511 15809803 -129779485 - AluSq SINE Alu -21 292 1 994 119 11 11 chr10 15810214 15810390 -129778898 - AluSq SINE Alu 0 313 138 3914 93 6 4 chr10 15810556 15811102 -129778186 - L1PB1 LINE L1 -4 6147 5601 917 84 8 0 chr10 15811102 15811226 -129778062 - L1PB1 LINE L1 -1 6150 6019 2293 103 3 0 chr10 15811594 15811906 -129777382 - AluSp SINE Alu 0 313 1 892 189 60 27 chr10 15812490 15812734 -129776554 + MER58B DNA MER1_type 1 327 -14 1942 101 41 0 chr10 15812743 15813011 -129776277 + AluSg SINE Alu 12 290 -20 392 299 143 24 chr10 15813337 15813588 -129775700 - L2 LINE L2 -75 3238 2958 1457 153 4 0 chr10 15813705 15813934 -129775354 - AluJb SINE Alu -82 230 1 254 299 77 60 chr10 15813960 15814077 -129775211 + L2 LINE L2 3151 3269 -3 767 263 10 24 chr10 15814108 15814317 -129774971 - MER3 DNA MER1_type -3 206 1 187 202 107 24 chr10 15814441 15814525 -129774763 + L2 LINE L2 2779 2869 -445 228 290 43 65 chr10 15814575 15814713 -129774575 + L2 LINE L2 2935 3069 -244 1583 189 96 6 chr10 15814744 15815077 -129774211 - MLT1A1 LTR MaLR 0 365 3 342 243 28 117 chr10 15815079 15815265 -129774023 - L1MC5 LINE L1 -62 7899 7751 1549 179 0 17 chr10 15815265 15815566 -129773722 - AluJb SINE Alu -11 301 6 342 243 28 117 chr10 15815566 15815696 -129773592 - L1MC5 LINE L1 -210 7751 7611 344 288 70 62 chr10 15815730 15815987 -129773301 + L2 LINE L2 3051 3309 -4 280 373 0 52 chr10 15816150 15816284 -129773004 - L2 LINE L2 -10 3262 3136 25 0 0 0 chr10 15816332 15816357 -129772931 + AT_rich Low_complexity Low_complexity 1 25 0 240 307 79 74 chr10 15816683 15816872 -129772416 + LTR67 LTR ERVL 102 291 -266 348 209 191 0 chr10 15816903 15817013 -129772275 + LTR67 LTR ERVL 404 534 -23 2226 78 0 66 chr10 15817689 15818023 -129771265 - AluSq SINE Alu -1 312 1 23 0 0 0 chr10 15819071 15819094 -129770194 + AT_rich Low_complexity Low_complexity 1 23 0 2075 129 0 3 chr10 15819841 15820144 -129769144 - AluSx SINE Alu -10 302 1 2013 117 3 25 chr10 15820903 15821220 -129768068 - AluSq SINE Alu -3 310 1 21 36 0 0 chr10 15821324 15821352 -129767936 + AT_rich Low_complexity Low_complexity 1 28 0 2067 120 7 0 chr10 15821704 15822005 -129767283 - AluSx SINE Alu -9 303 1 21 36 0 0 chr10 15822455 15822483 -129766805 + AT_rich Low_complexity Low_complexity 1 28 0 1914 80 65 0 chr10 15822484 15822775 -129766513 + AluY SINE Alu 1 308 0 211 365 29 36 chr10 15823063 15823200 -129766088 + MIR SINE MIR 13 148 -114 234 293 57 50 chr10 15823517 15823657 -129765631 + MIR SINE MIR 122 262 0 1707 219 15 55 chr10 15823866 15823966 -129765322 + LTR40b LTR ERVL 3 105 -357 1711 112 3 93 chr10 15823966 15824289 -129764999 - AluSq SINE Alu -19 294 1 1707 219 15 55 chr10 15824289 15824663 -129764625 + LTR40b LTR ERVL 105 458 -4 1163 86 6 12 chr10 15824968 15825130 -129764158 + AluSq SINE Alu 1 161 -152 334 48 0 0 chr10 15825249 15825291 -129763997 - AluY SINE Alu -260 42 1 408 335 11 28 chr10 15825623 15825799 -129763489 - L3 LINE CR1 -156 1421 1249 518 188 0 118 chr10 15827341 15827485 -129761803 - L1ME1 LINE L1 0 6164 6038 256 264 184 75 chr10 15827531 15827705 -129761583 + MIR SINE MIR 30 222 -40 265 240 145 68 chr10 15828164 15828385 -129760903 - L1ME4a LINE L1 -46 6075 5838 527 338 26 22 chr10 15828962 15829190 -129760098 + L1MC/D LINE L1 5435 5663 -2145 2036 122 3 13 chr10 15829680 15829992 -129759296 - AluSg SINE Alu -1 309 1 23 0 0 0 chr10 15830065 15830088 -129759200 + AT_rich Low_complexity Low_complexity 1 23 0 1925 117 3 14 chr10 15830103 15830393 -129758895 - AluJo SINE Alu -25 287 1 682 81 0 0 chr10 15831611 15831710 -129757578 + L1PB2 LINE L1 5925 6023 -128 2033 135 0 0 chr10 15831729 15832032 -129757256 - AluSx SINE Alu -9 303 1 5237 118 28 14 chr10 15832257 15833067 -129756221 - L1PA15 LINE L1 0 6165 5344 2004 128 7 0 chr10 15835158 15835455 -129753833 + AluSx SINE Alu 1 299 -13 2157 100 0 31 chr10 15835473 15835793 -129753495 + AluSg SINE Alu 1 310 0 1607 168 0 39 chr10 15837520 15837829 -129751459 + AluJb SINE Alu 6 302 -10 2093 117 3 0 chr10 15838616 15838915 -129750373 - AluSx SINE Alu -12 300 1 1834 162 0 3 chr10 15838928 15839230 -129750058 - AluSx SINE Alu -11 301 1 509 239 244 38 chr10 15839431 15839644 -129749644 + MIR SINE MIR 6 262 0 1824 157 0 3 chr10 15839669 15839968 -129749320 + AluJb SINE Alu 1 298 -14 1596 128 0 33 chr10 15839981 15840254 -129749034 + L1PA15 LINE L1 5902 6165 0 2129 86 0 20 chr10 15840445 15840748 -129748540 - AluSq SINE Alu -16 297 1 1331 180 90 14 chr10 15841669 15841947 -129747341 + AluJb SINE Alu 2 300 -12 389 290 91 39 chr10 15842023 15842254 -129747034 + MLT1K LTR MaLR 332 574 -14 1936 114 11 0 chr10 15842361 15842633 -129746655 + AluSx SINE Alu 1 275 -37 1243 124 0 0 chr10 15843009 15843186 -129746102 - AluSg/x SINE Alu -2 310 134 2232 99 3 3 chr10 15843186 15843490 -129745798 - AluSx SINE Alu -8 304 1 292 276 29 67 chr10 15843578 15843683 -129745605 - MIR SINE MIR -70 138 38 203 182 0 0 chr10 15844029 15844062 -129745226 + (TATATG)n Simple_repeat Simple_repeat 2 34 0 371 311 0 0 chr10 15844062 15844152 -129745136 + L1MC4 LINE L1 6614 6703 -1339 344 265 24 12 chr10 15844126 15844209 -129745079 + L1MCa LINE L1 1995 2078 -4348 * 1913 116 0 20 chr10 15844264 15844557 -129744731 - AluSx SINE Alu -25 287 1 2144 103 0 20 chr10 15845514 15845816 -129743472 + AluSx SINE Alu 1 296 -16 1548 159 12 40 chr10 15845849 15846170 -129743118 + AluJb SINE Alu 1 312 0 1890 130 0 14 chr10 15847262 15847592 -129741696 + AluJb SINE Alu 1 312 0 1485 170 62 7 chr10 15849194 15849483 -129739805 - AluJo SINE Alu -7 305 1 209 277 117 36 chr10 15849718 15849855 -129739433 + L2 LINE L2 2625 2772 -542 475 255 83 2 chr10 15849984 15850152 -129739136 - MIR SINE MIR -57 151 3 1874 151 0 19 chr10 15850230 15850541 -129738747 - AluJb SINE Alu -7 305 1 239 273 107 33 chr10 15850832 15850953 -129738335 + MIR SINE MIR 112 241 -21 926 179 114 25 chr10 15851128 15851329 -129737959 - MER20 DNA MER1_type 0 219 1 208 281 0 0 chr10 15851460 15851524 -129737764 + CT-rich Low_complexity Low_complexity 1 64 0 1446 196 14 4 chr10 15852250 15852525 -129736763 + AluJo SINE Alu 1 278 -34 192 316 75 30 chr10 15852595 15852728 -129736560 - L2 LINE L2 -581 2733 2595 1161 44 17 17 chr10 15854091 15854140 -129735148 + (TCTA)n Simple_repeat Simple_repeat 1 229 0 1161 44 17 17 chr10 15854140 15854320 -129734968 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 1597 144 34 45 chr10 15854404 15854696 -129734592 - AluJo SINE Alu -23 289 1 1392 179 19 0 chr10 15854944 15855212 -129734076 + AluJb SINE Alu 28 300 -12 321 68 0 0 chr10 15855657 15855701 -129733587 + (TG)n Simple_repeat Simple_repeat 2 45 0 1250 211 4 8 chr10 15855746 15855993 -129733295 + AluJb SINE Alu 1 246 -66 234 0 0 0 chr10 15855993 15856019 -129733269 + (A)n Simple_repeat Simple_repeat 1 26 0 230 343 68 41 chr10 15856094 15856240 -129733048 - L2 LINE L2 0 3272 3123 1777 158 7 10 chr10 15856998 15857301 -129731987 + AluJb SINE Alu 1 302 -10 2216 107 0 0 chr10 15857737 15858046 -129731242 + AluSc SINE Alu 1 309 0 492 304 242 29 chr10 15858557 15859172 -129730116 - L2 LINE L2 -479 2835 2090 1839 115 41 0 chr10 15859181 15859487 -129729801 + AluSx SINE Alu 1 317 0 1634 186 0 16 chr10 15859516 15859833 -129729455 - AluJb SINE Alu 0 312 1 37584 70 10 5 chr10 15860342 15865229 -129724059 + L1PA5 LINE L1 11 4919 -1227 3660 50 0 0 chr10 15865229 15865666 -129723622 + L1PA5 LINE L1 5703 6141 -13 2011 112 0 34 chr10 15865703 15865999 -129723289 - AluSx SINE Alu -14 298 13 668 165 46 57 chr10 15866044 15866238 -129723050 + L1MA7 LINE L1 6098 6289 -2 2075 116 7 0 chr10 15866591 15866893 -129722395 - AluSg SINE Alu -6 304 1 1577 198 0 7 chr10 15867098 15867401 -129721887 - AluJo SINE Alu -11 301 1 671 193 91 136 chr10 15867519 15867644 -129721644 - MIR SINE MIR 0 262 154 2002 109 0 24 chr10 15867644 15867938 -129721350 - AluSq SINE Alu -25 288 2 671 193 91 136 chr10 15867938 15868077 -129721211 - MIR SINE MIR -108 154 10 1898 135 3 0 chr10 15868180 15868469 -129720819 - AluSq SINE Alu -21 292 3 2423 198 20 10 chr10 15868745 15869234 -129720054 + L1MB7 LINE L1 5573 6066 -118 200 343 20 49 chr10 15869951 15870053 -129719235 - L2 LINE L2 -186 3086 2988 1757 123 0 0 chr10 15870053 15870297 -129718991 + AluSc SINE Alu 1 244 -65 254 28 0 28 chr10 15870311 15870347 -129718941 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 1179 128 0 17 chr10 15870347 15870527 -129718761 + AluSg/x SINE Alu 128 304 -8 2501 138 57 2 chr10 15871334 15871740 -129717548 + MSTA LTR MaLR 1 428 0 194 369 60 7 chr10 15871786 15871935 -129717353 - MIR3 SINE MIR -22 186 30 2059 120 10 0 chr10 15871995 15872296 -129716992 + AluSx SINE Alu 1 304 -8 337 221 0 0 chr10 15872374 15872442 -129716846 - MER82 DNA MER2_type -9 644 577 804 172 13 0 chr10 15872488 15872639 -129716649 - AluSg/x SINE Alu -4 306 154 1948 171 32 16 chr10 15872640 15873009 -129716279 - MER82 DNA MER2_type -278 375 1 572 137 0 20 chr10 15873113 15873215 -129716073 - AluJb SINE Alu 0 312 213 312 298 62 39 chr10 15873333 15873511 -129715777 + L2 LINE L2 2222 2403 -911 183 42 0 0 chr10 15873555 15873579 -129715709 + (GGGA)n Simple_repeat Simple_repeat 3 26 0 1245 199 0 15 chr10 15873988 15874254 -129715034 - AluJo SINE Alu 0 312 51 198 0 0 0 chr10 15874837 15874859 -129714429 + (TG)n Simple_repeat Simple_repeat 2 23 0 1520 161 40 4 chr10 15874859 15875132 -129714156 - AluJo SINE Alu -27 285 3 635 320 86 28 chr10 15875565 15875944 -129713344 - L2 LINE L2 -285 2987 2590 520 276 0 0 chr10 15876371 15876487 -129712801 + MIR SINE MIR 51 166 -96 1970 133 0 3 chr10 15876699 15877001 -129712287 - AluSq SINE Alu -12 301 1 2310 81 3 3 chr10 15877500 15877810 -129711478 - AluY SINE Alu -1 310 1 1624 80 0 61 chr10 15877812 15878124 -129711164 - AluSc SINE Alu -16 293 1 2301 82 3 3 chr10 15879326 15879631 -129709657 + AluSc SINE Alu 1 305 -4 2033 120 0 3 chr10 15879749 15880049 -129709239 - AluSx SINE Alu -13 299 1 918 75 0 0 chr10 15880088 15880208 -129709080 - AluJb SINE Alu -192 120 1 419 235 197 0 chr10 15880396 15880528 -129708760 + MER5A DNA MER1_type 14 171 -18 2211 96 0 13 chr10 15882099 15882411 -129706877 - AluY SINE Alu -3 308 1 1926 127 20 13 chr10 15882413 15882713 -129706575 - AluSx SINE Alu -10 302 1 197 343 67 62 chr10 15882716 15882926 -129706362 + L2 LINE L2 2976 3186 -86 966 82 0 0 chr10 15883338 15883484 -129705804 + (TGGA)n Simple_repeat Simple_repeat 3 148 0 1050 231 9 4 chr10 15883542 15883771 -129705517 + AluJo SINE Alu 1 230 -82 260 54 54 0 chr10 15883771 15883808 -129705480 + AluSx SINE Alu 96 134 -168 1068 130 6 40 chr10 15883840 15884017 -129705271 + AluSx SINE Alu 118 288 -22 28 0 0 0 chr10 15884022 15884050 -129705238 + AT_rich Low_complexity Low_complexity 1 28 0 1959 141 0 0 chr10 15885984 15886274 -129703014 + AluSx SINE Alu 1 290 -22 1728 150 42 0 chr10 15886859 15887145 -129702143 - AluJb SINE Alu -14 298 1 1963 122 26 16 chr10 15887208 15887512 -129701776 + AluSx SINE Alu 3 309 -3 306 295 0 0 chr10 15887635 15887713 -129701575 + (CA)n Simple_repeat Simple_repeat 2 79 0 326 215 29 27 chr10 15887961 15888038 -129701250 - L1MCa LINE L1 -1339 6983 2005 1886 226 46 83 chr10 15888040 15888466 -129700822 + L1ME2 LINE L1 5461 5901 -263 2077 113 7 0 chr10 15888466 15888767 -129700521 + AluSx SINE Alu 8 310 -2 2029 91 0 14 chr10 15888767 15889093 -129700195 + AluSx SINE Alu 1 322 0 1886 226 46 83 chr10 15889093 15889375 -129699913 + L1ME2 LINE L1 5899 6145 -19 239 249 44 105 chr10 15889424 15889653 -129699635 + L1MC4 LINE L1 7826 8040 -2 1840 151 0 0 chr10 15889752 15890043 -129699245 - AluJo SINE Alu -18 294 4 479 281 67 17 chr10 15890710 15890888 -129698400 + MIR SINE MIR 66 252 -10 1502 240 170 29 chr10 15891318 15891697 -129697591 + MLT1E2 LTR MaLR 4 486 -140 1443 215 11 4 chr10 15891697 15892001 -129697287 - AluJb SINE Alu 0 308 3 1502 240 170 29 chr10 15892001 15892166 -129697122 + MLT1E2 LTR MaLR 486 626 0 457 370 14 51 chr10 15892470 15892746 -129696542 - L3 LINE CR1 -463 1114 849 27 62 0 0 chr10 15892860 15892908 -129696380 + AT_rich Low_complexity Low_complexity 1 48 0 2024 112 0 0 chr10 15893186 15893462 -129695826 + AluSx SINE Alu 16 291 -21 1957 99 0 58 chr10 15894204 15894516 -129694772 + AluSx SINE Alu 11 304 -8 2491 160 42 43 chr10 15896327 15896833 -129692455 - MLT1D LTR MaLR 0 505 1 215 337 42 11 chr10 15896850 15896945 -129692343 + MIR3 SINE MIR 94 191 -17 1919 146 10 0 chr10 15897259 15897561 -129691727 + AluSx SINE Alu 1 305 -7 2057 123 3 0 chr10 15897897 15898190 -129691098 - AluSq SINE Alu -19 294 1 22 0 0 0 chr10 15898565 15898587 -129690701 + AT_rich Low_complexity Low_complexity 1 22 0 2202 78 0 3 chr10 15898687 15899005 -129690283 + AluY SINE Alu 1 317 0 212 59 29 0 chr10 15900971 15901005 -129688283 + (TA)n Simple_repeat Simple_repeat 1 35 0 213 39 0 0 chr10 15902006 15902032 -129687256 + (T)n Simple_repeat Simple_repeat 1 26 0 22 35 0 0 chr10 15903133 15903162 -129686126 + GC_rich Low_complexity Low_complexity 1 29 0 1951 176 127 9 chr10 15903557 15903990 -129685298 - MER31A LTR ERV1 0 485 2 577 251 23 41 chr10 15903991 15904162 -129685126 - MIR SINE MIR -78 184 17 1935 143 0 13 chr10 15904178 15904493 -129684795 + AluSx SINE Alu 1 311 -1 409 246 45 18 chr10 15905111 15905221 -129684067 - MIR SINE MIR -79 183 71 774 217 37 0 chr10 15905314 15905503 -129683785 + L1MD3 LINE L1 7799 7994 -1 1480 71 20 20 chr10 15905657 15905854 -129683434 - MER107 DNA MER1_type 0 197 1 198 103 0 0 chr10 15906521 15906550 -129682738 + (A)n Simple_repeat Simple_repeat 1 29 0 2292 93 3 0 chr10 15906685 15906986 -129682302 - AluSp SINE Alu -11 302 1 2259 90 7 7 chr10 15907481 15907791 -129681497 - AluSx SINE Alu -2 310 1 2132 128 0 3 chr10 15908139 15908451 -129680837 - AluSx SINE Alu -1 311 1 231 103 0 0 chr10 15908604 15908643 -129680645 + (T)n Simple_repeat Simple_repeat 1 39 0 1544 183 10 17 chr10 15909130 15909420 -129679868 - AluJo SINE Alu -24 288 1 23 0 0 0 chr10 15909577 15909600 -129679688 + AT_rich Low_complexity Low_complexity 1 23 0 1543 174 31 7 chr10 15910026 15910313 -129678975 - AluJo SINE Alu -16 296 3 1854 143 3 7 chr10 15910593 15910894 -129678394 - AluSx SINE Alu -12 300 1 2131 103 3 16 chr10 15911368 15911678 -129677610 - AluSx SINE Alu -6 306 1 1326 164 0 91 chr10 15912044 15912342 -129676946 + AluJo SINE Alu 38 308 -4 590 264 70 70 chr10 15912346 15912588 -129676700 + L2 LINE L2 3050 3291 -22 1192 176 5 0 chr10 15912661 15912877 -129676411 + AluJo SINE Alu 75 291 -21 1656 138 8 4 chr10 15913538 15913798 -129675490 + AluJo SINE Alu 15 275 -37 1914 130 7 10 chr10 15913972 15914280 -129675008 - AluSx SINE Alu -5 307 1 2075 120 0 7 chr10 15914835 15915136 -129674152 + AluSx SINE Alu 1 299 -13 2398 71 3 0 chr10 15915306 15915615 -129673673 - AluY SINE Alu -1 310 1 1126 277 108 42 chr10 15915975 15916505 -129672783 + MLT1K LTR MaLR 2 566 -22 1400 168 0 4 chr10 15916705 15916943 -129672345 + AluJo SINE Alu 1 237 -75 1557 124 81 42 chr10 15917148 15917431 -129671857 - AluJb SINE Alu -18 294 1 1696 138 7 21 chr10 15918402 15918692 -129670596 + AluJo SINE Alu 9 294 -18 930 175 12 6 chr10 15919368 15919528 -129669760 + FRAM SINE Alu 5 165 -1 1510 169 4 4 chr10 15919675 15919935 -129669353 + AluJb SINE Alu 1 260 -52 2042 100 0 17 chr10 15920120 15920451 -129668837 - AluSq SINE Alu 0 326 1 228 203 101 38 chr10 15920557 15920636 -129668652 + MIR SINE MIR 63 146 -116 889 230 0 0 chr10 15920636 15920801 -129668487 + FAM SINE Alu 1 165 -10 1953 120 0 17 chr10 15920801 15921102 -129668186 - AluSx SINE Alu -16 296 1 371 174 90 35 chr10 15921103 15921228 -129668060 - MER106B DNA MER1_type -96 963 6 1586 132 0 97 chr10 15921392 15921703 -129667585 + AluJb SINE Alu 2 282 -30 893 9 0 9 chr10 15921704 15921811 -129667477 + (TAGA)n Simple_repeat Simple_repeat 4 109 0 954 228 19 14 chr10 15922010 15922035 -129667253 - MLT2C1 LTR ERVL -156 258 235 2439 62 3 0 chr10 15922035 15922339 -129666949 - AluY SINE Alu -6 305 1 954 228 19 14 chr10 15922339 15922564 -129666724 - MLT2C1 LTR ERVL -179 235 4 2860 211 37 31 chr10 15922564 15922866 -129666422 - ERVL LTR ERVL -4 5650 5351 1681 150 50 7 chr10 15922866 15923166 -129666122 + AluSq SINE Alu 1 313 0 2860 211 37 31 chr10 15923166 15923660 -129665628 - ERVL LTR ERVL -303 5351 4881 673 255 55 0 chr10 15923652 15923797 -129665491 + HERV16 LTR ERVL 536 688 -4308 * 2169 101 3 0 chr10 15924030 15924326 -129664962 - AluSx SINE Alu -15 297 1 186 143 0 0 chr10 15924564 15924599 -129664689 + (TTC)n Simple_repeat Simple_repeat 2 36 0 793 108 63 1 chr10 15924648 15924783 -129664505 - L1PA8 LINE L1 -269 5897 5751 27 49 0 0 chr10 15924884 15924925 -129664363 + AT_rich Low_complexity Low_complexity 1 41 0 819 191 13 0 chr10 15925789 15925941 -129663347 - AluY SINE Alu -23 288 135 363 261 53 100 chr10 15925999 15926379 -129662909 + L1ME4a LINE L1 5728 6089 -32 1578 170 40 0 chr10 15926451 15926728 -129662560 + AluJb SINE Alu 1 288 -24 243 0 0 0 chr10 15926736 15926763 -129662525 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 451 347 63 8 chr10 15927004 15927243 -129662045 + L1ME1 LINE L1 5355 5606 -515 415 259 113 18 chr10 15927336 15927591 -129661697 + L1ME1 LINE L1 5679 5946 -224 251 174 0 0 chr10 15927598 15927644 -129661644 - MLT2C1 LTR ERVL -7 390 345 1392 204 142 50 chr10 15927671 15928108 -129661180 - MLT2B1 LTR ERVL -43 477 1 261 0 0 0 chr10 15928117 15928159 -129661129 + (TG)n Simple_repeat Simple_repeat 1 71 0 261 0 0 0 chr10 15928159 15928188 -129661100 + (TG)n Simple_repeat Simple_repeat 2 30 0 1808 114 33 0 chr10 15928397 15928670 -129660618 + AluSg SINE Alu 1 282 -28 463 174 29 0 chr10 15928601 15928670 -129660618 + AluSg/x SINE Alu 211 330 0 402 0 20 0 chr10 15928670 15928719 -129660569 + (TAA)n Simple_repeat Simple_repeat 2 180 0 308 183 28 28 chr10 15928810 15928881 -129660407 + L1ME4a LINE L1 6047 6117 -4 2032 128 30 0 chr10 15929300 15929597 -129659691 + AluY SINE Alu 1 306 -5 207 0 0 0 chr10 15929751 15929774 -129659514 + (TC)n Simple_repeat Simple_repeat 2 24 0 258 32 0 0 chr10 15929776 15929807 -129659481 + (CA)n Simple_repeat Simple_repeat 1 31 0 16409 165 40 19 chr10 15929836 15932363 -129656925 + L1MA2 LINE L1 15 2487 -5236 2724 129 0 17 chr10 15932363 15932775 -129656513 + L1PA13 LINE L1 5759 6163 0 16409 165 40 19 chr10 15932775 15934706 -129654582 + L1MA2 LINE L1 2487 4376 -3347 2498 69 0 0 chr10 15934706 15935010 -129654278 - AluY SINE Alu -7 304 1 16409 165 40 19 chr10 15935010 15937747 -129651541 + L1MA2 LINE L1 4376 7723 0 244 236 18 0 chr10 15938089 15938144 -129651144 - L1MEd LINE L1 -5473 646 591 322 232 80 73 chr10 15938465 15938616 -129650672 - L1MEd LINE L1 -5966 153 2 339 363 66 6 chr10 15939132 15939314 -129649974 + MIR3 SINE MIR 15 207 -1 2219 93 3 7 chr10 15939474 15939765 -129649523 - AluSg SINE Alu -20 290 1 1464 155 0 74 chr10 15939848 15940119 -129649169 - AluJo SINE Alu -27 285 35 223 325 25 12 chr10 15940146 15940226 -129649062 - L2 LINE L2 -2 3311 3231 244 224 34 22 chr10 15940642 15940775 -129648513 + MIR SINE MIR 2 185 -77 1921 215 24 19 chr10 15941065 15941563 -129647725 + L1P LINE L1 4793 5293 -858 207 0 0 0 chr10 15941706 15941729 -129647559 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 829 250 2 9 chr10 15941729 15941929 -129647359 - L1PB4 LINE L1 -14 6142 5944 2338 106 0 0 chr10 15941929 15942232 -129647056 + AluSx SINE Alu 2 304 -8 1786 117 92 7 chr10 15943673 15943955 -129645333 + AluSx SINE Alu 7 312 0 2161 186 5 18 chr10 15944318 15944710 -129644578 - MLT1B LTR MaLR -2 388 2 2361 92 0 16 chr10 15944720 15945025 -129644263 + AluSx SINE Alu 1 300 -12 275 350 51 0 chr10 15945066 15945183 -129644105 - MIR3 SINE MIR -7 201 79 3264 106 34 61 chr10 15945871 15945917 -129643371 - MER75 DNA T2_type 0 514 468 2151 137 3 13 chr10 15945917 15945936 -129643352 - AluSx SINE Alu 0 312 294 180 0 0 0 chr10 15945936 15945956 -129643332 + (TA)n Simple_repeat Simple_repeat 1 20 0 2151 137 3 13 chr10 15945956 15946251 -129643037 - AluSx SINE Alu -18 294 1 3264 106 34 61 chr10 15946251 15946340 -129642948 - MER75 DNA T2_type -46 468 378 2355 81 7 13 chr10 15946340 15946648 -129642640 + AluSq SINE Alu 1 306 -7 3264 106 34 61 chr10 15946648 15947038 -129642250 - MER75 DNA T2_type -136 378 2 569 274 81 38 chr10 15947822 15948191 -129641097 + L1ME LINE L1 1324 1708 -4688 * 1962 263 52 61 chr10 15948190 15948502 -129640786 + L1ME LINE L1 3281 3594 -2621 2304 86 3 3 chr10 15948502 15948803 -129640485 + AluY SINE Alu 1 301 -10 1962 263 52 61 chr10 15948803 15949537 -129639751 + L1ME LINE L1 3594 4318 -1897 275 180 40 0 chr10 15949692 15949742 -129639546 - AluJb SINE Alu -10 292 241 2276 130 54 25 chr10 15949742 15950096 -129639192 + THE1B LTR MaLR 1 364 0 1454 171 0 28 chr10 15950096 15950348 -129638940 - AluJb SINE Alu -67 245 1 665 258 45 93 chr10 15950415 15950791 -129638497 + L1ME LINE L1 5334 5691 -542 3618 178 13 5 chr10 15951653 15952253 -129637035 + MER6A DNA MER2_type 1 605 0 1473 179 0 37 chr10 15952496 15952769 -129636519 - AluJb SINE Alu -49 263 1 1042 176 24 4 chr10 15953222 15953504 -129635784 + L1MB4 LINE L1 5175 5468 -712 3738 63 0 0 chr10 15953504 15953948 -129635340 - L1PA7 LINE L1 -2 6152 5709 3616 162 36 40 chr10 15953948 15954671 -129634617 + L1MB4 LINE L1 5460 6180 0 266 241 36 0 chr10 15954882 15954965 -129634323 - MER114 LTR ERV 0 648 563 676 181 52 0 chr10 15954968 15955084 -129634204 + FLAM_A SINE Alu 13 134 -8 1375 174 103 116 chr10 15955086 15955282 -129634006 - MER114 LTR ERV -88 560 363 1694 174 14 7 chr10 15955282 15955569 -129633719 + AluJb SINE Alu 1 289 -23 1375 174 103 116 chr10 15955569 15955935 -129633353 - MER114 LTR ERV -285 363 5 25 65 0 0 chr10 15955979 15956025 -129633263 + AT_rich Low_complexity Low_complexity 1 46 0 577 145 0 0 chr10 15956094 15956177 -129633111 + AluSg/x SINE Alu 213 295 -15 22 35 0 0 chr10 15956350 15956379 -129632909 + AT_rich Low_complexity Low_complexity 1 29 0 1772 109 8 19 chr10 15956385 15956651 -129632637 - AluSg SINE Alu -11 299 37 228 167 21 42 chr10 15956655 15956703 -129632585 - MER94 DNA DNA -87 47 1 553 260 12 24 chr10 15956704 15956873 -129632415 + L1ME LINE L1 5685 5851 -380 215 179 0 0 chr10 15956873 15956912 -129632376 + MER5B DNA MER1_type 9 47 -131 4764 107 283 108 chr10 15956947 15958405 -129630883 - pTR5 LTR ERV1 0 2438 62 544 108 0 0 chr10 15959082 15959156 -129630132 - MADE1 DNA Mariner -1 79 6 389 250 164 0 chr10 15959368 15959484 -129629804 - MER63 DNA MER1_type -300 762 2 332 329 82 18 chr10 15960558 15960777 -129628511 - L1MC4a LINE L1 -255 5915 5683 2909 0 0 0 chr10 15960854 15961161 -129628127 + AluYa5 SINE Alu 1 307 -4 2108 118 3 22 chr10 15961346 15961660 -129627628 - AluSx SINE Alu -4 308 1 2361 60 0 0 chr10 15961670 15962101 -129627187 - AluY SINE Alu 0 431 1 2057 134 0 0 chr10 15962230 15962513 -129626775 + AluSx SINE Alu 1 283 -29 306 301 55 41 chr10 15962538 15962684 -129626604 - L1MC4a LINE L1 -518 5646 5499 1076 220 123 82 chr10 15962702 15962891 -129626397 - L1MC5 LINE L1 -38 7923 7743 1828 174 10 3 chr10 15962891 15963189 -129626099 - AluJb SINE Alu -11 301 2 1076 220 123 82 chr10 15963189 15963477 -129625811 - L1MC5 LINE L1 -218 7743 7413 3661 115 11 46 chr10 15963477 15963853 -129625435 + MER1A DNA MER1_type 1 354 -2346 1922 75 4 0 chr10 15963853 15964093 -129625195 + AluSx SINE Alu 60 300 -12 3661 115 11 46 chr10 15964093 15964262 -129625026 + MER1A DNA MER1_type 354 527 0 1076 220 123 82 chr10 15964262 15964384 -129624904 - L1MC5 LINE L1 -548 7413 7298 970 139 20 0 chr10 15965449 15965600 -129623688 - FRAM SINE Alu -23 153 1 496 222 23 6 chr10 15966146 15966322 -129622966 + CT-rich Low_complexity Low_complexity 2 180 0 278 193 18 18 chr10 15966350 15966464 -129622824 + CT-rich Low_complexity Low_complexity 2 115 0 369 0 0 0 chr10 15966464 15966505 -129622783 + (CA)n Simple_repeat Simple_repeat 1 41 0 246 307 54 78 chr10 15966740 15966906 -129622382 + L2 LINE L2 3081 3242 -30 32 35 0 18 chr10 15967124 15967145 -129622143 + AT_rich Low_complexity Low_complexity 1 21 -35 1863 182 0 3 chr10 15967145 15967453 -129621835 + AluJo SINE Alu 1 307 -5 32 35 0 18 chr10 15967453 15967488 -129621800 + AT_rich Low_complexity Low_complexity 21 56 0 2197 91 44 3 chr10 15967775 15968044 -129621244 + AluSg SINE Alu 1 285 -25 279 0 0 0 chr10 15968044 15968075 -129621213 + (CA)n Simple_repeat Simple_repeat 2 32 0 2197 91 44 3 chr10 15968075 15968103 -129621185 + AluSg SINE Alu 285 310 0 1878 127 53 7 chr10 15968217 15968501 -129620787 + AluSx SINE Alu 1 297 -15 238 163 62 0 chr10 15969660 15969740 -129619548 + (TA)n Simple_repeat Simple_repeat 1 85 0 2177 110 3 0 chr10 15969880 15970171 -129619117 + AluSc SINE Alu 1 292 -17 22 0 0 0 chr10 15970171 15970193 -129619095 + AT_rich Low_complexity Low_complexity 1 22 0 1420 152 16 20 chr10 15970205 15970449 -129618839 + AluJo SINE Alu 45 287 -25 838 161 0 15 chr10 15970554 15970691 -129618597 + AluJo SINE Alu 1 135 -177 1510 189 21 11 chr10 15970691 15970971 -129618317 + AluJo SINE Alu 1 283 -29 226 298 0 0 chr10 15971768 15971825 -129617463 + GA-rich Low_complexity Low_complexity 99 155 0 620 247 96 90 chr10 15971912 15972151 -129617137 - L2 LINE L2 0 3313 3070 225 65 0 0 chr10 15972151 15972182 -129617106 + (TG)n Simple_repeat Simple_repeat 1 31 0 620 247 96 90 chr10 15972182 15972274 -129617014 - L2 LINE L2 -243 3070 2980 517 311 44 19 chr10 15972587 15972793 -129616495 + MIR SINE MIR 52 262 0 929 227 43 11 chr10 15973232 15973514 -129615774 + L1MA4 LINE L1 6009 6299 -1 219 277 64 92 chr10 15973556 15973667 -129615621 + L2 LINE L2 2687 2800 -472 1913 160 3 0 chr10 15973667 15973973 -129615315 + AluJb SINE Alu 1 307 -5 219 277 64 92 chr10 15973973 15974262 -129615026 + L2 LINE L2 2800 3067 -205 26 0 0 0 chr10 15974394 15974420 -129614868 + AT_rich Low_complexity Low_complexity 1 26 0 2141 109 3 0 chr10 15974421 15974704 -129614584 - AluSx SINE Alu -24 288 5 3648 149 20 30 chr10 15974723 15975180 -129614108 - L1PB4 LINE L1 -12 6144 5693 2016 110 62 7 chr10 15975180 15975470 -129613818 - AluSq SINE Alu -7 306 1 3648 149 20 30 chr10 15975470 15975654 -129613634 - L1PB4 LINE L1 -463 5693 5509 376 302 47 31 chr10 15976073 15976265 -129613023 + MIR SINE MIR 40 234 -28 274 217 14 14 chr10 15976284 15976353 -129612935 + (TAG)n Simple_repeat Simple_repeat 3 71 0 21 0 0 0 chr10 15976706 15976727 -129612561 + GC_rich Low_complexity Low_complexity 1 21 0 2146 119 10 3 chr10 15977316 15977696 -129611592 - AluSp SINE Alu 0 382 1 2497 74 0 0 chr10 15977707 15978018 -129611270 - AluY SINE Alu 0 311 1 25 65 0 0 chr10 15978470 15978516 -129610772 + AT_rich Low_complexity Low_complexity 1 46 0 1720 145 69 28 chr10 15978903 15979193 -129610095 + AluSx SINE Alu 4 305 -7 1060 180 0 0 chr10 15979209 15979381 -129609907 - FRAM SINE Alu -10 166 1 922 260 66 17 chr10 15979394 15979682 -129609606 + MLT1J LTR MaLR 210 511 0 3369 143 10 56 chr10 15980344 15980972 -129608316 - LTR9 LTR ERV1 0 612 14 222 62 0 0 chr10 15980973 15981005 -129608283 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 2157 69 0 79 chr10 15981005 15981308 -129607980 - AluY SINE Alu -32 279 1 390 259 139 6 chr10 15981335 15981501 -129607787 - MIR SINE MIR -48 214 27 732 211 13 6 chr10 15981946 15982102 -129607186 + FRAM SINE Alu 2 158 -18 1887 152 0 26 chr10 15982121 15982424 -129606864 + AluJo SINE Alu 1 295 -17 369 246 94 22 chr10 15982481 15982619 -129606669 - MARNA DNA Mariner -236 350 203 469 281 146 35 chr10 15984263 15984523 -129604765 + MLT1L LTR MaLR 3 291 -324 1239 170 0 28 chr10 15984534 15984746 -129604542 + AluJo SINE Alu 86 291 -21 729 208 0 0 chr10 15986479 15986609 -129602679 - FLAM_A SINE Alu 0 133 4 4535 152 66 24 chr10 15986938 15987805 -129601483 + MER4D LTR ERV1 1 903 0 2412 86 13 0 chr10 15988415 15988719 -129600569 - AluSc SINE Alu -1 308 1 261 232 0 37 chr10 15989135 15989217 -129600071 + GA-rich Low_complexity Low_complexity 1 79 0 2083 247 46 26 chr10 15989219 15989789 -129599499 + MLT1G LTR MaLR 1 581 -9 24 53 0 0 chr10 15990008 15990046 -129599242 + AT_rich Low_complexity Low_complexity 1 38 0 255 308 0 0 chr10 15990281 15990346 -129598942 - L2 LINE L2 -20 3252 3188 1059 235 18 43 chr10 15990601 15990878 -129598410 + MLT1A2 LTR MaLR 6 275 -99 24 53 0 0 chr10 15991077 15991115 -129598173 + AT_rich Low_complexity Low_complexity 1 38 0 455 233 25 74 chr10 15991122 15991285 -129598003 - HAL1 LINE L1 -1 2506 2352 437 322 153 8 chr10 15991965 15992220 -129597068 + L3 LINE CR1 208 499 -1078 2016 128 0 3 chr10 15992339 15992654 -129596634 + AluSx SINE Alu 1 314 0 184 380 20 10 chr10 15992708 15992808 -129596480 + L3 LINE CR1 1440 1540 -37 1733 150 73 4 chr10 15992834 15993108 -129596180 - AluJo SINE Alu -19 293 1 23 0 0 0 chr10 15994720 15994743 -129594545 + AT_rich Low_complexity Low_complexity 1 23 0 1880 257 19 38 chr10 15994917 15995636 -129593652 - L1M4 LINE L1 -4831 1711 1067 2111 127 0 7 chr10 15995885 15996216 -129593072 + AluSx SINE Alu 1 312 0 1024 268 90 26 chr10 15996861 15996966 -129592322 + L2 LINE L2 2829 2926 -387 2269 193 11 106 chr10 15996966 15997512 -129591776 + MLT2B3 LTR ERVL 1 484 -70 1800 174 26 7 chr10 15997512 15997839 -129591449 + AluJb SINE Alu 1 312 0 2269 193 11 106 chr10 15997839 15997904 -129591384 + MLT2B3 LTR ERVL 484 554 0 1024 268 90 26 chr10 15997904 15998254 -129591034 + L2 LINE L2 2926 3313 0 1723 148 52 86 chr10 15998926 15999310 -129589978 - THE1C LTR MaLR -4 371 1 23 0 0 0 chr10 15999894 15999917 -129589371 + AT_rich Low_complexity Low_complexity 1 23 0 966 172 0 24 chr10 15999960 16000129 -129589159 + FRAM SINE Alu 1 159 -17 2179 94 0 4 chr10 16001818 16002116 -129587172 - AluSc SINE Alu 0 305 9 2068 109 0 0 chr10 16003417 16003692 -129585596 - AluSx SINE Alu -3 309 35 527 335 67 38 chr10 16005774 16006225 -129583063 - LTR16B LTR ERVL 0 464 1 229 300 17 0 chr10 16006269 16006329 -129582959 - MIR3 SINE MIR -25 183 123 238 245 112 49 chr10 16006503 16006646 -129582642 - L1ME4a LINE L1 -5 6116 5965 2391 77 7 0 chr10 16007349 16007659 -129581629 + L1MA3 LINE L1 5638 5949 -356 22 70 0 0 chr10 16007662 16007705 -129581583 + AT_rich Low_complexity Low_complexity 1 43 0 22 35 0 0 chr10 16007853 16007882 -129581406 + AT_rich Low_complexity Low_complexity 1 29 0 2411 90 10 3 chr10 16008807 16009117 -129580171 + AluSq SINE Alu 1 312 -1 354 45 0 0 chr10 16009639 16009683 -129579605 + (TG)n Simple_repeat Simple_repeat 1 44 0 220 163 0 41 chr10 16011546 16011595 -129577693 - L2 LINE L2 -5 3308 3262 224 308 77 26 chr10 16011818 16011935 -129577353 + L2 LINE L2 3145 3267 -5 2560 52 0 10 chr10 16012341 16012647 -129576641 - AluY SINE Alu -8 303 1 344 43 0 0 chr10 16012699 16012745 -129576543 - MADE1 DNA Mariner -34 46 1 247 242 121 25 chr10 16013353 16013510 -129575778 + L1MC4 LINE L1 7698 7869 -173 1457 160 4 4 chr10 16013572 16013797 -129575491 + AluJo SINE Alu 1 225 -87 203 316 32 11 chr10 16014051 16014146 -129575142 - L3b LINE CR1 -132 1451 1355 2181 97 0 57 chr10 16014387 16014718 -129574570 - AluSx SINE Alu 0 312 1 220 188 31 62 chr10 16014755 16014819 -129574469 + L2 LINE L2 3168 3229 -84 293 100 20 0 chr10 16015428 16015478 -129573810 + (CA)n Simple_repeat Simple_repeat 2 52 0 2461 88 0 0 chr10 16016531 16016839 -129572449 - AluY SINE Alu -3 308 1 1940 147 0 38 chr10 16017311 16017631 -129571657 - AluSq SINE Alu -5 308 1 400 296 33 0 chr10 16017771 16017923 -129571365 + MER103 DNA DNA 2 158 -8 2080 117 47 7 chr10 16019004 16019304 -129569984 + AluSx SINE Alu 1 312 0 2166 130 3 0 chr10 16019619 16019927 -129569361 - AluSg SINE Alu -1 309 1 251 288 58 50 chr10 16020109 16020248 -129569040 + MIR SINE MIR 24 163 -99 2315 87 17 0 chr10 16020266 16020566 -129568722 - AluSx SINE Alu -7 305 1 826 253 93 19 chr10 16020867 16021191 -129568097 - L1MC/D LINE L1 -2147 5661 5314 420 20 0 0 chr10 16021453 16021502 -129567786 + (ATG)n Simple_repeat Simple_repeat 1 49 0 1323 201 0 35 chr10 16021513 16021772 -129567516 - AluJo SINE Alu -25 287 38 22 0 0 0 chr10 16021772 16021794 -129567494 + AT_rich Low_complexity Low_complexity 1 22 0 1339 105 6 0 chr10 16022003 16022184 -129567104 - AluSx SINE Alu 0 312 131 847 89 32 0 chr10 16022327 16022451 -129566837 - AluSx SINE Alu -185 128 1 2823 17 0 0 chr10 16022481 16022782 -129566506 - AluYa5 SINE Alu -10 301 1 414 78 188 0 chr10 16022805 16022869 -129566419 + MADE1 DNA Mariner 4 79 -1 229 188 25 88 chr10 16024431 16024511 -129564777 + MER5A DNA MER1_type 114 188 -1 1996 100 64 4 chr10 16024590 16024870 -129564418 + AluSc SINE Alu 1 297 -12 2164 132 0 0 chr10 16024918 16025214 -129564074 + AluSx SINE Alu 1 296 -16 225 239 0 0 chr10 16025343 16025389 -129563899 - Charlie8 DNA MER1_type -6 2411 2366 1755 193 0 7 chr10 16025938 16026244 -129563044 - AluJb SINE Alu -8 304 1 2342 96 0 3 chr10 16026367 16026669 -129562619 - AluSx SINE Alu -11 301 1 734 248 86 0 chr10 16026790 16027012 -129562276 - MIR SINE MIR -4 258 18 640 290 95 12 chr10 16027488 16027879 -129561409 - L1ME LINE L1 -481 5681 5255 1816 155 7 0 chr10 16027921 16028198 -129561090 + AluSx SINE Alu 1 279 -33 843 234 56 14 chr10 16028240 16028454 -129560834 + MIR SINE MIR 16 238 -24 1463 206 7 14 chr10 16028576 16028863 -129560425 - AluJo SINE Alu -27 285 1 606 233 70 38 chr10 16029047 16029294 -129559994 - HERVL LTR ERVL -1138 4347 4107 441 292 0 9 chr10 16029322 16029435 -129559853 + LTR33 LTR ERVL 108 219 -302 2359 104 7 0 chr10 16030382 16030689 -129558599 + AluSx SINE Alu 1 309 -3 393 331 45 19 chr10 16031031 16031188 -129558100 + L2 LINE L2 3153 3313 0 1751 195 126 29 chr10 16031314 16031766 -129557522 + MLT1D LTR MaLR 1 496 -9 316 236 72 40 chr10 16031991 16032213 -129557075 + MLT1K LTR MaLR 280 540 -48 2665 137 34 5 chr10 16032314 16032730 -129556558 + MSTA LTR MaLR 1 428 0 593 297 84 4 chr10 16033333 16033596 -129555692 - MER102a DNA MER1_type -6 324 41 1595 153 28 17 chr10 16034317 16034604 -129554684 - L1MB3 LINE L1 -1 6182 5893 2140 121 0 0 chr10 16034615 16034905 -129554383 + AluSx SINE Alu 1 290 -22 316 314 0 10 chr10 16034932 16035034 -129554254 - L2 LINE L2 0 3313 3213 435 331 115 22 chr10 16035090 16035116 -129554172 - L2 LINE L2 -963 2351 2329 1809 145 39 0 chr10 16035116 16035398 -129553890 + AluSx SINE Alu 1 293 -19 435 331 115 22 chr10 16035398 16035727 -129553561 - L2 LINE L2 -985 2329 1963 796 95 0 9 chr10 16035809 16035914 -129553374 - FLAM_C SINE Alu -19 124 21 433 284 87 84 chr10 16036972 16037317 -129551971 - MLT1H LTR MaLR -201 348 3 255 31 0 0 chr10 16037745 16037777 -129551511 + (TC)n Simple_repeat Simple_repeat 1 32 0 225 0 0 0 chr10 16037776 16037801 -129551487 + (CA)n Simple_repeat Simple_repeat 1 25 0 * 2528 96 61 9 chr10 16038577 16038922 -129550366 - THE1B LTR MaLR -1 363 1 279 297 47 39 chr10 16039257 16039385 -129549903 + MIR SINE MIR 19 147 -115 1882 185 62 36 chr10 16039396 16039845 -129549443 + MER31B LTR ERV1 1 461 -5 235 343 29 19 chr10 16039849 16039954 -129549334 + MIR SINE MIR 154 259 -3 2529 71 3 0 chr10 16039962 16040272 -129549016 - AluY SINE Alu 0 311 1 302 368 65 0 chr10 16040334 16040489 -129548799 - L3 LINE CR1 -286 1291 1127 275 327 212 18 chr10 16040908 16041125 -129548163 - L3 LINE CR1 -827 750 492 917 178 12 12 chr10 16041439 16041602 -129547686 - FRAM SINE Alu -13 163 1 1871 180 65 56 chr10 16041626 16042088 -129547200 + MLT1C LTR MaLR 1 466 -1 2188 109 0 13 chr10 16042386 16042688 -129546600 + AluSx SINE Alu 1 298 -14 1690 123 4 4 chr10 16043562 16043797 -129545491 + AluSx SINE Alu 1 235 -77 1388 167 0 28 chr10 16043797 16044048 -129545240 - AluJo SINE Alu -68 244 1 27 49 0 0 chr10 16044269 16044310 -129544978 + AT_rich Low_complexity Low_complexity 1 41 0 315 279 27 99 chr10 16044413 16044549 -129544739 + L1ME LINE L1 5580 5695 -426 1694 147 42 3 chr10 16044549 16044834 -129544454 - AluJo SINE Alu -10 302 7 315 279 27 99 chr10 16044834 16044919 -129544369 + L1ME LINE L1 5695 5785 -336 409 211 13 92 chr10 16045355 16045446 -129543842 - L1MB8 LINE L1 -1 6177 6080 210 37 0 0 chr10 16045446 16045473 -129543815 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 2158 90 18 0 chr10 16045473 16045751 -129543537 - AluSg SINE Alu -27 283 1 409 211 13 92 chr10 16045751 16045810 -129543478 - L1MB8 LINE L1 -96 6082 6038 2265 109 0 10 chr10 16046396 16046709 -129542579 - AluSx SINE Alu 0 312 3 2148 108 3 7 chr10 16049337 16049632 -129539656 - AluSx SINE Alu -18 294 1 521 231 186 13 chr10 16051850 16052006 -129537282 - MIR3 SINE MIR -1 207 25 1883 138 4 4 chr10 16052139 16052415 -129536873 + AluSx SINE Alu 1 276 -36 2030 135 0 16 chr10 16053026 16053330 -129535958 - AluSx SINE Alu -11 301 3 2304 139 44 13 chr10 16053863 16054250 -129535038 + L1MA4 LINE L1 5897 6295 -5 203 286 0 0 chr10 16054461 16054510 -129534778 - L3 LINE CR1 -3 1574 1526 2092 120 3 17 chr10 16054738 16055038 -129534250 + AluSx SINE Alu 1 296 -16 2103 111 0 66 chr10 16055636 16055968 -129533320 + AluSx SINE Alu 1 310 -2 21 0 0 0 chr10 16057005 16057026 -129532262 + AT_rich Low_complexity Low_complexity 1 21 0 1084 139 0 0 chr10 16057029 16057180 -129532108 - FRAM SINE Alu -24 152 2 604 143 0 159 chr10 16057289 16057369 -129531919 - Charlie5 DNA MER1_type 0 2585 2550 2321 88 3 13 chr10 16057369 16057677 -129531611 + AluSx SINE Alu 1 305 -7 604 143 0 159 chr10 16057677 16057785 -129531503 - Charlie5 DNA MER1_type -35 2550 2427 515 154 138 0 chr10 16057825 16057948 -129531340 - Charlie5 DNA MER1_type -121 2491 2352 * 612 192 34 41 chr10 16057947 16058093 -129531195 - Charlie5 DNA MER1_type -2413 199 55 2196 111 3 0 chr10 16058187 16058484 -129530804 - AluSp SINE Alu -15 298 1 1971 116 3 66 chr10 16059915 16060234 -129529054 - AluJb SINE Alu -3 309 11 761 116 27 7 chr10 16060943 16061089 -129528199 + CT-rich Low_complexity Low_complexity 1 149 0 620 178 76 8 chr10 16061089 16061207 -129528081 - FRAM SINE Alu 0 40 1 355 274 168 33 chr10 16061291 16061515 -129527773 - MIR SINE MIR -12 250 3 349 260 85 55 chr10 16061521 16061693 -129527595 + MER5A DNA MER1_type 2 187 -2 443 281 183 0 chr10 16061817 16061970 -129527318 - MER5A DNA MER1_type 0 189 9 2284 97 13 0 chr10 16062274 16062572 -129526716 + AluSg SINE Alu 1 302 -8 21 57 0 0 chr10 16063173 16063208 -129526080 + AT_rich Low_complexity Low_complexity 1 35 0 387 208 0 0 chr10 16063319 16063439 -129525849 + (TCCA)n Simple_repeat Simple_repeat 3 122 0 2081 118 0 23 chr10 16063664 16063969 -129525319 + AluSq SINE Alu 1 298 -15 909 197 66 38 chr10 16064005 16064157 -129525131 - MER20 DNA MER1_type 0 219 58 2140 101 37 3 chr10 16064157 16064455 -129524833 + AluSg SINE Alu 1 308 -2 909 197 66 38 chr10 16064455 16064515 -129524773 - MER20 DNA MER1_type -161 58 1 1743 175 97 27 chr10 16064700 16065101 -129524187 - MER63B DNA MER1_type -7 429 1 2159 115 0 10 chr10 16065922 16066218 -129523070 - AluSx SINE Alu -19 293 1 196 288 4 0 chr10 16066266 16066317 -129522971 - MER5A DNA MER1_type -59 119 68 4511 127 70 58 chr10 16066795 16068199 -129521089 + pTR5 LTR ERV1 743 2606 0 1389 211 68 0 chr10 16069844 16069965 -129519323 + AluJo SINE Alu 1 112 -200 183 42 0 0 chr10 16069965 16069989 -129519299 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1389 211 68 0 chr10 16069989 16070147 -129519141 + AluJo SINE Alu 112 299 -13 2334 103 3 0 chr10 16070239 16070540 -129518748 + AluSx SINE Alu 1 302 -10 373 37 0 19 chr10 16070616 16070670 -129518618 + L1PA3 LINE L1 6103 6155 0 234 0 0 0 chr10 16070962 16070988 -129518300 + (T)n Simple_repeat Simple_repeat 1 26 0 2850 133 18 13 chr10 16071662 16071812 -129517476 - L1MA4 LINE L1 -2 6298 6150 2419 108 61 0 chr10 16071812 16072155 -129517133 + THE1B LTR MaLR 1 364 0 2850 133 18 13 chr10 16072155 16072457 -129516831 - L1MA4 LINE L1 -150 6150 5844 892 196 68 96 chr10 16072798 16073163 -129516125 + MER66A LTR ERV1 97 336 -142 509 169 0 0 chr10 16073282 16073359 -129515929 + MER66A LTR ERV1 402 478 0 183 274 104 57 chr10 16073621 16073727 -129515561 - L2 LINE L2 -5 3267 3157 762 234 62 0 chr10 16074260 16074452 -129514836 + MER3 DNA MER1_type 1 204 -5 671 249 22 27 chr10 16074709 16074894 -129514394 + MIR SINE MIR 63 246 -16 353 281 185 7 chr10 16075097 16075243 -129514045 - MIR3 SINE MIR -5 203 32 274 116 0 0 chr10 16075455 16075498 -129513790 + MLT1F LTR MaLR 339 381 -161 1475 203 57 91 chr10 16075737 16076021 -129513267 + MLT1C LTR MaLR 7 299 -168 1603 193 0 11 chr10 16076021 16076306 -129512982 + AluJo SINE Alu 1 282 -30 216 23 0 68 chr10 16076309 16076353 -129512935 + (CAAAA)n Simple_repeat Simple_repeat 1 41 0 1475 203 57 91 chr10 16076353 16076538 -129512750 + MLT1C LTR MaLR 301 464 -3 2256 210 92 8 chr10 16076663 16077163 -129512125 + MLT1F LTR MaLR 1 542 0 695 275 132 11 chr10 16077165 16077445 -129511843 + L2 LINE L2 2345 2658 -656 326 238 161 30 chr10 16077681 16077849 -129511439 - L1ME3A LINE L1 -219 5951 5762 855 259 111 58 chr10 16077990 16078403 -129510885 + L2 LINE L2 2879 3313 0 1097 211 28 0 chr10 16078463 16078676 -129510612 + MER20 DNA MER1_type 1 219 0 434 147 22 21 chr10 16078683 16078899 -129510389 + GA-rich Low_complexity Low_complexity 1 216 0 2092 140 0 7 chr10 16079298 16079605 -129509683 + AluSg SINE Alu 1 305 -5 23 92 0 0 chr10 16080032 16080097 -129509191 + AT_rich Low_complexity Low_complexity 1 65 0 1632 164 0 4 chr10 16080107 16080369 -129508919 - AluSx SINE Alu -19 293 33 2451 97 0 0 chr10 16081210 16081519 -129507769 - AluSq SINE Alu -4 309 1 2225 127 41 39 chr10 16081973 16082336 -129506952 + THE1B LTR MaLR 1 364 0 2236 90 0 7 chr10 16084142 16084442 -129504846 - AluY SINE Alu -9 302 5 2387 60 0 3 chr10 16084550 16084833 -129504455 - L1PA7 LINE L1 -7 6147 5866 1968 149 0 3 chr10 16084983 16085278 -129504010 + AluSx SINE Alu 1 294 -18 2307 122 0 0 chr10 16086083 16086395 -129502893 - AluSx SINE Alu 0 312 1 477 100 0 0 chr10 16087035 16087095 -129502193 + Alu SINE Alu 2 61 -257 758 129 0 0 chr10 16087452 16087568 -129501720 - L1MB3 LINE L1 -40 6143 6028 2082 114 28 3 chr10 16087673 16087963 -129501325 + AluSq SINE Alu 1 297 -16 303 28 0 0 chr10 16088673 16088709 -129500579 + (TTTC)n Simple_repeat Simple_repeat 2 37 0 623 173 140 39 chr10 16088710 16088889 -129500399 - MSTA LTR MaLR -51 377 181 2164 51 0 8 chr10 16089656 16089913 -129499375 - AluY SINE Alu -18 293 39 2310 91 7 10 chr10 16089973 16090282 -129499006 - AluSx SINE Alu -4 308 1 280 145 16 0 chr10 16090519 16090581 -129498707 - L1MA3 LINE L1 -1 6304 6242 1133 125 42 5 chr10 16090681 16090873 -129498415 - L1MA3 LINE L1 -91 6214 6016 2055 148 3 0 chr10 16091125 16091422 -129497866 + AluSx SINE Alu 1 298 -14 876 127 0 45 chr10 16091545 16091679 -129497609 - FLAM_C SINE Alu -5 128 1 345 351 39 39 chr10 16093490 16093686 -129495602 - L2 LINE L2 -1207 2107 1912 2721 83 0 3 chr10 16093686 16094025 -129495263 + L1PA10 LINE L1 5828 6165 -3 345 351 39 39 chr10 16094025 16094039 -129495249 - L2 LINE L2 -1402 1912 1899 1615 167 20 20 chr10 16094039 16094338 -129494950 + AluJo SINE Alu 14 312 0 345 351 39 39 chr10 16094338 16094411 -129494877 - L2 LINE L2 -1414 1900 1823 238 265 59 74 chr10 16094508 16094892 -129494396 + L1ME4a LINE L1 5670 6051 -70 1271 229 70 3 chr10 16094934 16095218 -129494070 - AluJo SINE Alu -9 303 1 405 58 0 0 chr10 16095238 16095290 -129493998 + (TA)n Simple_repeat Simple_repeat 1 52 0 273 293 111 43 chr10 16095482 16095690 -129493598 - L2 LINE L2 -1480 1834 1613 2236 135 24 34 chr10 16095812 16096191 -129493097 - THE1C LTR MaLR 0 375 1 2575 148 23 26 chr10 16096880 16097307 -129491981 + MSTB LTR MaLR 1 426 0 2069 114 7 16 chr10 16097661 16097967 -129491321 + AluSx SINE Alu 1 303 -9 240 35 0 0 chr10 16099387 16099416 -129489872 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1266 244 7 19 chr10 16099616 16099923 -129489365 - AluSq SINE Alu 0 303 1 1648 186 3 35 chr10 16100631 16100943 -129488345 - AluJo SINE Alu -10 302 1 636 138 0 21 chr10 16102313 16102407 -129486881 - FLAM_A SINE Alu -19 123 32 2506 80 0 6 chr10 16103046 16103360 -129485928 + AluSq SINE Alu 1 312 -1 181 111 67 0 chr10 16106597 16106642 -129482646 + A-rich Low_complexity Low_complexity 2 49 0 814 177 0 0 chr10 16106712 16106842 -129482446 - FLAM_C SINE Alu -3 130 1 2292 92 0 0 chr10 16107115 16107407 -129481881 - AluSc SINE Alu -15 294 3 27 29 0 0 chr10 16107411 16107445 -129481843 + AT_rich Low_complexity Low_complexity 1 34 0 1748 153 0 4 chr10 16107849 16108137 -129481151 + AluJb SINE Alu 23 309 0 351 44 0 0 chr10 16108661 16108706 -129480582 + (TG)n Simple_repeat Simple_repeat 1 45 0 22 0 0 0 chr10 16109125 16109147 -129480141 + AT_rich Low_complexity Low_complexity 1 22 0 233 267 0 0 chr10 16109369 16109429 -129479859 + MIR SINE MIR 90 149 -113 248 266 9 46 chr10 16109985 16110094 -129479194 - MIR3 SINE MIR 0 208 104 3090 160 63 21 chr10 16110669 16111243 -129478045 - L1MD1 LINE L1 0 6242 5645 22 0 0 0 chr10 16111704 16111726 -129477562 + AT_rich Low_complexity Low_complexity 1 22 0 1600 226 72 62 chr10 16112414 16113125 -129476163 + L1ME1 LINE L1 2804 3521 -2625 1990 256 22 7 chr10 16113129 16113677 -129475611 + L1ME1 LINE L1 3618 4173 -1973 1449 250 72 86 chr10 16113696 16114263 -129475025 + MER77 LTR ERV1 41 599 -6 437 227 62 23 chr10 16114348 16114476 -129474812 + L1ME1 LINE L1 4171 4303 -1843 2894 216 81 37 chr10 16114526 16114677 -129474611 + L1ME1 LINE L1 4787 4930 -1236 2015 161 0 0 chr10 16114677 16114987 -129474301 + AluJo SINE Alu 1 310 -2 2894 216 81 37 chr10 16114987 16115811 -129473477 + L1ME1 LINE L1 4930 5845 -321 3660 53 2 2 chr10 16115811 16116243 -129473045 + L1PA7 LINE L1 5719 6150 -4 2894 216 81 37 chr10 16116243 16116575 -129472713 + L1ME1 LINE L1 5845 6161 -5 2006 131 0 0 chr10 16116735 16117010 -129472278 + AluSx SINE Alu 1 275 -37 252 0 0 0 chr10 16117017 16117045 -129472243 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 1072 284 72 40 chr10 16117046 16117491 -129471797 + L1ME3A LINE L1 5322 5792 -378 1895 105 63 14 chr10 16117491 16117777 -129471511 + AluSx SINE Alu 1 300 -12 1072 284 72 40 chr10 16117777 16117929 -129471359 + L1ME3A LINE L1 5792 5938 -232 346 268 133 4 chr10 16117942 16118085 -129471203 + MIR SINE MIR 2 172 -36 2468 94 0 0 chr10 16118770 16119078 -129470210 - AluSq SINE Alu -4 309 2 1981 113 3 69 chr10 16119647 16119965 -129469323 - AluSx SINE Alu -15 297 1 1152 66 0 0 chr10 16120150 16120286 -129469002 - AluSc SINE Alu -173 136 1 2236 121 0 0 chr10 16122830 16123128 -129466160 - AluSx SINE Alu -14 298 1 405 0 0 0 chr10 16124471 16124516 -129464772 + (TTATA)n Simple_repeat Simple_repeat 5 49 0 258 32 0 0 chr10 16125659 16125690 -129463598 + (ATTG)n Simple_repeat Simple_repeat 4 34 0 1541 191 49 0 chr10 16125690 16125957 -129463331 - AluJb SINE Alu -32 280 1 597 311 31 13 chr10 16126395 16126623 -129462665 - MIR SINE MIR -25 237 6 208 336 91 0 chr10 16126724 16126834 -129462454 - MIR SINE MIR -7 255 136 2181 123 0 0 chr10 16126906 16127206 -129462082 - AluSg SINE Alu -10 300 1 2201 110 3 10 chr10 16127566 16127866 -129461422 + AluSg SINE Alu 1 298 -12 2022 103 53 0 chr10 16128850 16129132 -129460156 + AluSp SINE Alu 1 297 -16 564 290 85 0 chr10 16129327 16129503 -129459785 + MIR SINE MIR 21 211 -51 245 214 22 67 chr10 16129756 16129845 -129459443 + MER103 DNA DNA 38 122 -44 24 32 0 0 chr10 16131390 16131421 -129457867 + AT_rich Low_complexity Low_complexity 1 31 0 267 265 121 12 chr10 16131598 16131681 -129457607 + L2 LINE L2 3193 3284 -29 184 208 62 0 chr10 16132410 16132458 -129456830 - L2 LINE L2 -1 3312 3262 275 214 29 29 chr10 16132598 16132668 -129456620 - L2 LINE L2 -188 3084 3015 479 277 66 121 chr10 16132685 16132708 -129456580 + MIR SINE MIR 13 36 -226 2078 124 0 0 chr10 16132708 16132990 -129456298 + AluSx SINE Alu 4 316 0 192 32 65 0 chr10 16132990 16133021 -129456267 + A-rich Low_complexity Low_complexity 2 180 0 479 277 66 121 chr10 16133021 16133175 -129456113 + MIR SINE MIR 36 175 -87 1178 35 0 28 chr10 16133175 16133317 -129455971 - L1PA5 LINE L1 -2 6152 6015 479 277 66 121 chr10 16133317 16133393 -129455895 + MIR SINE MIR 175 254 -8 483 300 111 12 chr10 16133618 16133871 -129455417 - L2 LINE L2 -471 2843 2566 2153 125 13 0 chr10 16134024 16134327 -129454961 + AluSx SINE Alu 1 307 -5 1193 174 43 0 chr10 16134424 16134659 -129454629 + L1MB3 LINE L1 5928 6172 -11 186 43 0 0 chr10 16134663 16134686 -129454602 + (ATG)n Simple_repeat Simple_repeat 2 24 0 1831 183 0 3 chr10 16135521 16135832 -129453456 + AluJo SINE Alu 1 310 -2 323 161 0 58 chr10 16136014 16136101 -129453187 - L1MA10 LINE L1 0 6334 6253 507 233 0 45 chr10 16137608 16137741 -129451547 + MER63 DNA MER1_type 1 753 -83 267 277 24 0 chr10 16137740 16137823 -129451465 + MER63 DNA MER1_type 978 1062 0 * 273 29 0 0 chr10 16141469 16141503 -129447785 + (CA)n Simple_repeat Simple_repeat 2 35 0 186 301 14 68 chr10 16141678 16141824 -129447464 - L2 LINE L2 -299 2973 2836 2394 49 42 0 chr10 16144558 16144845 -129444443 - AluY SINE Alu -12 299 1 2148 117 0 0 chr10 16145945 16146272 -129443016 + AluSx SINE Alu 1 327 0 532 208 164 25 chr10 16146556 16146715 -129442573 + MER5A DNA MER1_type 9 189 0 709 241 24 18 chr10 16147405 16147575 -129441713 + MER5B DNA MER1_type 2 172 -6 231 301 44 18 chr10 16147910 16148023 -129441265 - LTR16B LTR ERVL -1 463 348 641 293 59 4 chr10 16148065 16148304 -129440984 - LTR16B LTR ERVL -212 252 1 2068 149 0 0 chr10 16148578 16148880 -129440408 - AluSx SINE Alu -10 302 1 409 325 15 35 chr10 16148911 16149111 -129440177 - MIR SINE MIR -18 244 49 336 284 84 32 chr10 16150187 16150377 -129438911 - MIR SINE MIR -2 260 61 2163 111 7 3 chr10 16150466 16150764 -129438524 - AluY SINE Alu -11 300 2 2220 179 26 7 chr10 16150881 16151311 -129437977 + L1PA16 LINE L1 5729 6166 0 3113 91 5 0 chr10 16151554 16151994 -129437294 + MLT2A2 LTR ERVL 12 453 0 744 314 62 0 chr10 16152037 16152343 -129436945 + LTR16C LTR ERVL 167 491 0 234 0 0 0 chr10 16153376 16153402 -129435886 + (CA)n Simple_repeat Simple_repeat 2 27 0 923 188 12 6 chr10 16154779 16154939 -129434349 + FRAM SINE Alu 1 153 -23 2078 126 3 0 chr10 16154943 16155259 -129434029 + AluSx SINE Alu 1 312 0 309 26 0 0 chr10 16155641 16155679 -129433609 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 529 297 102 13 chr10 16155866 16156169 -129433119 + L1ME LINE L1 5328 5657 -464 624 247 132 6 chr10 16156211 16156385 -129432903 - MIR SINE MIR -44 218 23 1956 145 0 0 chr10 16156471 16156787 -129432501 + AluSx SINE Alu 1 316 0 1137 264 116 0 chr10 16156787 16157218 -129432070 - L1ME1 LINE L1 -13 6153 5673 198 263 88 105 chr10 16157339 16157453 -129431835 + MIR SINE MIR 38 149 -59 1828 133 17 91 chr10 16158712 16158830 -129430458 + MLT1B LTR MaLR 1 126 -264 2729 157 91 59 chr10 16158830 16159288 -129430000 + LTR9 LTR ERV1 1 443 -169 212 0 0 35 chr10 16159288 16159317 -129429971 + (TTTTC)n Simple_repeat Simple_repeat 2 29 0 1869 113 53 0 chr10 16159320 16159586 -129429702 - AluSg SINE Alu -30 280 1 2729 157 91 59 chr10 16159586 16159716 -129429572 + LTR9 LTR ERV1 444 612 0 1828 133 17 91 chr10 16159716 16160003 -129429285 + MLT1B LTR MaLR 126 376 -14 206 336 8 34 chr10 16160081 16160200 -129429088 - L2 LINE L2 -6 3307 3192 3890 103 20 45 chr10 16160818 16161392 -129427896 + MER41B LTR ERV1 1 559 -76 2510 65 3 0 chr10 16161392 16161699 -129427589 - AluY SINE Alu -3 308 1 3890 103 20 45 chr10 16161699 16161775 -129427513 + MER41B LTR ERV1 559 635 0 589 139 37 0 chr10 16161823 16161931 -129427357 + L1MA4A LINE L1 6184 6295 -8 1127 143 35 150 chr10 16162201 16162601 -129426687 + MER4A LTR ERV1 1 354 -310 297 99 213 184 chr10 16162670 16162712 -129426576 + MER4C LTR ERV1 300 339 -126 2010 147 20 3 chr10 16162712 16163018 -129426270 + AluSx SINE Alu 1 311 -1 297 99 213 184 chr10 16163018 16163116 -129426172 + MER4C LTR ERV1 339 444 -21 188 88 59 0 chr10 16163382 16163416 -129425872 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 341 333 85 41 chr10 16163417 16163663 -129425625 - L2 LINE L2 -2 3270 3014 1585 82 0 0 chr10 16163906 16164138 -129425150 - L1PA7 LINE L1 -686 5486 5255 5343 56 0 0 chr10 16164138 16164796 -129424492 + L1PA7 LINE L1 5496 6154 0 248 139 0 0 chr10 16164814 16164850 -129424438 + tRNA-Arg-AGA tRNA tRNA 1 36 -40 606 200 0 8 chr10 16165730 16165850 -129423438 - MER63 DNA MER1_type -317 745 1 1891 147 48 7 chr10 16166495 16166787 -129422501 - AluSx SINE Alu -8 304 1 241 336 150 11 chr10 16167068 16167342 -129421946 + L2 LINE L2 2904 3215 -98 450 327 9 51 chr10 16167376 16167590 -129421698 - MIR SINE MIR -4 258 54 470 267 38 0 chr10 16167602 16167707 -129421581 + L2 LINE L2 3205 3313 0 708 190 116 27 chr10 16167761 16168019 -129421269 + L1MD3 LINE L1 7695 7975 -20 2402 110 0 0 chr10 16168063 16168372 -129420916 - AluSc SINE Alu 0 309 1 429 314 89 31 chr10 16168456 16168647 -129420641 - MIR3 SINE MIR 0 208 7 351 0 0 0 chr10 16168986 16169025 -129420263 + (CA)n Simple_repeat Simple_repeat 2 40 0 23 33 0 0 chr10 16169826 16169856 -129419432 + AT_rich Low_complexity Low_complexity 1 30 0 2081 126 0 0 chr10 16169930 16170216 -129419072 + AluSx SINE Alu 1 286 -26 277 263 120 45 chr10 16170408 16170541 -129418747 - MIR SINE MIR -83 179 37 1464 187 74 11 chr10 16170572 16170856 -129418432 - AluJb SINE Alu -6 306 5 1985 137 0 17 chr10 16171914 16172213 -129417075 + AluJo SINE Alu 3 296 -16 232 331 32 16 chr10 16172453 16172577 -129416711 + MER5A DNA MER1_type 60 185 -4 681 252 6 6 chr10 16172777 16172936 -129416352 - MER5B DNA MER1_type -19 159 1 2326 165 25 5 chr10 16173021 16173463 -129415825 - LTR32 LTR ERVL 0 471 21 1074 129 0 0 chr10 16174131 16174286 -129415002 - AluSg/x SINE Alu -22 288 134 2216 118 0 0 chr10 16174923 16175219 -129414069 + AluSc SINE Alu 9 304 -5 1950 135 7 7 chr10 16176361 16176649 -129412639 - AluSx SINE Alu -24 288 1 1563 200 0 10 chr10 16177348 16177501 -129411787 - AluJo SINE Alu -25 287 137 531 0 0 0 chr10 16177501 16177560 -129411728 + (TA)n Simple_repeat Simple_repeat 2 60 0 1563 200 0 10 chr10 16177560 16177696 -129411592 - AluJo SINE Alu -175 137 1 190 152 0 0 chr10 16177842 16177875 -129411413 - L2 LINE L2 -1 3312 3280 2343 69 23 23 chr10 16177879 16178185 -129411103 + AluY SINE Alu 1 306 -5 2901 3 0 0 chr10 16180517 16180829 -129408459 - AluYb8 SINE Alu -6 312 1 243 312 54 29 chr10 16181002 16181207 -129408081 + HAL1 LINE L1 2265 2474 -33 39 118 0 0 chr10 16181430 16181651 -129407637 + AT_rich Low_complexity Low_complexity 1 221 0 3104 170 49 14 chr10 16182381 16182416 -129406872 + L1MC2 LINE L1 5291 5323 -1021 2037 102 49 3 chr10 16182416 16182701 -129406587 + AluSg SINE Alu 1 298 -12 3104 170 49 14 chr10 16182701 16183319 -129405969 + L1MC2 LINE L1 5323 5967 -377 1413 185 15 34 chr10 16183368 16183756 -129405532 + MSTC LTR MaLR 1 428 0 224 281 90 94 chr10 16186139 16186406 -129402882 + L2 LINE L2 2853 3118 -195 2348 170 50 55 chr10 16186406 16186892 -129402396 - L1MC1 LINE L1 -6 6327 5843 2388 93 0 3 chr10 16186892 16187203 -129402085 - AluSx SINE Alu -2 310 1 2348 170 50 55 chr10 16187203 16187315 -129401973 - L1MC1 LINE L1 -490 5843 5732 388 281 146 49 chr10 16187324 16187509 -129401779 + L2 LINE L2 3111 3313 0 303 312 64 9 chr10 16187705 16187814 -129401474 + L2 LINE L2 3156 3270 -2 448 274 175 34 chr10 16188587 16188850 -129400438 - L3 LINE CR1 -7 1570 1271 1652 175 14 11 chr10 16188871 16189156 -129400132 + AluJb SINE Alu 1 286 -26 248 319 76 80 chr10 16189321 16189423 -129399865 - L3 LINE CR1 -612 965 864 2152 113 3 0 chr10 16189423 16189730 -129399558 - AluSx SINE Alu 0 308 1 248 319 76 80 chr10 16189730 16189914 -129399374 - L3 LINE CR1 -713 864 679 310 250 20 30 chr10 16189916 16190016 -129399272 + L2 LINE L2 3187 3285 -28 370 310 39 26 chr10 16190332 16190487 -129398801 - L3 LINE CR1 -990 587 431 831 114 0 30 chr10 16190578 16190709 -129398579 - FLAM_C SINE Alu -5 138 12 453 358 66 18 chr10 16191126 16191352 -129397936 - MIR SINE MIR -6 256 20 924 296 90 34 chr10 16191489 16191994 -129397294 + L2 LINE L2 2794 3313 0 1328 216 89 39 chr10 16192659 16193098 -129396190 + MLT1C LTR MaLR 5 465 -2 30 27 0 0 chr10 16193098 16193135 -129396153 + AT_rich Low_complexity Low_complexity 1 37 0 891 233 6 0 chr10 16193254 16193430 -129395858 + MER45A DNA AcHobo 2 178 0 1152 163 163 43 chr10 16193575 16193901 -129395387 + MER47A DNA MER2_type 1 365 -1 192 40 0 0 chr10 16194027 16194052 -129395236 + (CA)n Simple_repeat Simple_repeat 1 25 0 1520 144 57 133 chr10 16194110 16194477 -129394811 + Charlie3 DNA MER1_type 1 2712 0 2063 151 0 10 chr10 16195394 16195706 -129393582 - AluJo SINE Alu -3 309 1 21 36 0 0 chr10 16196360 16196388 -129392900 + AT_rich Low_complexity Low_complexity 1 28 0 1677 162 20 30 chr10 16196643 16196939 -129392349 - AluJb SINE Alu -19 293 1 870 245 38 60 chr10 16197091 16197356 -129391932 - MIR SINE MIR -2 260 2 37593 34 2 0 chr10 16197586 16203108 -129386180 - L1PA4 LINE L1 -3 6152 623 747 33 0 0 chr10 16203108 16203198 -129386090 - L1PA4 LINE L1 -6050 96 7 416 285 100 32 chr10 16203354 16203555 -129385733 - MIR SINE MIR -40 222 12 247 284 21 121 chr10 16203699 16203889 -129385399 + L2 LINE L2 2651 2821 -493 180 0 0 0 chr10 16204947 16204967 -129384321 + (A)n Simple_repeat Simple_repeat 1 20 0 243 0 0 0 chr10 16206133 16206160 -129383128 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1944 143 0 3 chr10 16206163 16206450 -129382838 - AluSg SINE Alu -24 286 1 406 344 19 19 chr10 16206464 16206621 -129382667 - MIR3 SINE MIR -10 198 42 1984 126 10 40 chr10 16207717 16208019 -129381269 + AluSg SINE Alu 1 293 -17 622 299 69 92 chr10 16208155 16208820 -129380468 + L2 LINE L2 2155 2804 -510 239 333 0 0 chr10 16208833 16208902 -129380386 + L2 LINE L2 2733 2801 -513 22 70 0 0 chr10 16209069 16209112 -129380176 + AT_rich Low_complexity Low_complexity 1 43 0 435 321 127 0 chr10 16209344 16209509 -129379779 - MER91A DNA MER1_type -8 188 3 362 282 57 8 chr10 16209623 16209747 -129379541 + L2 LINE L2 3184 3313 0 2212 123 7 0 chr10 16209796 16210098 -129379190 + AluSq SINE Alu 1 304 -9 2117 130 35 0 chr10 16210125 16210501 -129378787 + L1MA5 LINE L1 5912 6300 0 22 0 0 0 chr10 16211396 16211418 -129377870 + AT_rich Low_complexity Low_complexity 1 22 0 2119 122 3 3 chr10 16212370 16212673 -129376615 + AluSc SINE Alu 1 303 -6 1187 36 0 0 chr10 16213284 16213424 -129375864 - AluY SINE Alu -1 310 171 379 287 63 71 chr10 16215131 16215385 -129373903 + L2 LINE L2 3014 3265 -48 1979 129 17 13 chr10 16215640 16215942 -129373346 + AluJb SINE Alu 1 303 -9 549 110 0 0 chr10 16216330 16216412 -129372876 + (TCCA)n Simple_repeat Simple_repeat 4 85 0 1788 176 0 23 chr10 16217439 16217741 -129371547 - AluJb SINE Alu -17 295 1 3644 167 40 4 chr10 16221193 16221240 -129368048 + L1 LINE L1 3568 3612 -2534 1824 159 6 56 chr10 16221240 16221560 -129367728 + AluJb SINE Alu 1 304 -8 3644 167 40 4 chr10 16221560 16222241 -129367047 + L1 LINE L1 3612 4322 -1824 3120 289 147 13 chr10 16222278 16223937 -129365351 + L1M2a LINE L1 6 1886 -5282 * 4456 147 59 35 chr10 16223932 16225014 -129364274 + L1MA7 LINE L1 5156 6263 -28 1869 157 18 3 chr10 16225014 16225300 -129363988 - AluJo SINE Alu -22 290 1 4456 147 59 35 chr10 16225300 16225330 -129363958 + L1MA7 LINE L1 6263 6291 0 1883 171 4 0 chr10 16225853 16226168 -129363120 + AluSx SINE Alu 1 316 0 263 313 48 0 chr10 16226724 16226807 -129362481 + MIR SINE MIR 68 154 -108 191 79 53 40 chr10 16227145 16227221 -129362067 + (TA)n Simple_repeat Simple_repeat 1 77 0 252 175 63 28 chr10 16227376 16227519 -129361769 + (TA)n Simple_repeat Simple_repeat 2 149 0 195 42 0 0 chr10 16227583 16227607 -129361681 + (TA)n Simple_repeat Simple_repeat 2 25 0 996 168 84 148 chr10 16229622 16229920 -129359368 + AluJb SINE Alu 8 286 -26 189 0 0 0 chr10 16229951 16229972 -129359316 + (CA)n Simple_repeat Simple_repeat 2 22 0 1115 234 55 22 chr10 16230433 16230745 -129358543 - MER58B DNA MER1_type -14 327 6 6676 72 15 12 chr10 16230818 16231892 -129357396 - L1PB1 LINE L1 -1 6150 5078 2060 147 7 0 chr10 16231908 16232215 -129357073 + AluSx SINE Alu 1 309 -3 245 222 10 0 chr10 16232295 16232394 -129356894 + (TAGA)n Simple_repeat Simple_repeat 4 103 0 607 253 82 58 chr10 16232394 16232916 -129356372 - L1ME2 LINE L1 -330 5834 5300 402 276 109 21 chr10 16233195 16233387 -129355901 + L2 LINE L2 2806 3014 -299 1016 207 0 0 chr10 16233446 16233673 -129355615 + L1P LINE L1 5116 5342 -804 183 229 153 59 chr10 16233674 16233792 -129355496 + L2 LINE L2 3021 3149 -164 225 278 188 30 chr10 16233846 16233979 -129355309 + L2 LINE L2 3158 3311 -2 2312 104 0 0 chr10 16235198 16235495 -129353793 - AluSq SINE Alu -16 297 1 219 240 0 0 chr10 16236651 16236701 -129352587 + (CA)n Simple_repeat Simple_repeat 2 51 0 643 324 44 7 chr10 16236936 16237211 -129352077 + L2 LINE L2 2411 2695 -619 273 278 97 0 chr10 16237233 16237305 -129351983 - AluJo SINE Alu -143 159 81 1824 307 153 40 chr10 16238114 16239377 -129349911 + L2 LINE L2 1255 2739 -574 1483 184 26 8 chr10 16239377 16239644 -129349644 - AluJo SINE Alu -40 272 1 1824 307 153 40 chr10 16239644 16240006 -129349282 + L2 LINE L2 2739 3059 -254 1682 206 51 74 chr10 16240006 16240445 -129348843 + MLT1D LTR MaLR 1 428 -77 2220 131 0 0 chr10 16240445 16240757 -129348531 + AluSx SINE Alu 1 312 0 1682 206 51 74 chr10 16240757 16240831 -129348457 + MLT1D LTR MaLR 428 502 -3 339 44 0 0 chr10 16240857 16240902 -129348386 + (CA)n Simple_repeat Simple_repeat 1 45 0 435 315 69 23 chr10 16241646 16241906 -129347382 + MLT1I LTR MaLR 111 382 -27 265 304 34 34 chr10 16243129 16243277 -129346011 - L1ME4a LINE L1 -213 5908 5761 567 235 36 73 chr10 16244405 16244632 -129344656 - L1ME1 LINE L1 -19 6147 5967 23 0 0 0 chr10 16245082 16245105 -129344183 + AT_rich Low_complexity Low_complexity 1 23 0 2060 136 0 57 chr10 16245204 16245535 -129343753 + AluSx SINE Alu 1 312 0 294 87 0 0 chr10 16246760 16246806 -129342482 + (TTTTTA)n Simple_repeat Simple_repeat 2 47 0 321 296 184 15 chr10 16248351 16248565 -129340723 + MIR3 SINE MIR 1 250 -12 2206 100 31 0 chr10 16249575 16249866 -129339422 - AluSq SINE Alu -13 300 1 264 170 0 0 chr10 16253359 16253412 -129335876 + (TG)n Simple_repeat Simple_repeat 1 53 0 1281 163 23 19 chr10 16253445 16253709 -129335579 - AluJo SINE Alu 0 312 48 192 77 0 0 chr10 16253752 16253778 -129335510 + (TTC)n Simple_repeat Simple_repeat 2 27 0 819 148 7 22 chr10 16253780 16253915 -129335373 - FLAM_C SINE Alu 0 133 1 1781 99 3 114 chr10 16254747 16255071 -129334217 + AluSg SINE Alu 1 288 -22 2067 142 0 3 chr10 16255959 16256261 -129333027 + AluSx SINE Alu 1 301 -11 201 300 29 0 chr10 16256388 16256458 -129332830 - MIR SINE MIR -123 139 68 26 0 0 0 chr10 16258928 16258954 -129330334 + AT_rich Low_complexity Low_complexity 1 26 0 594 174 7 13 chr10 16259052 16259207 -129330081 + GA-rich Low_complexity Low_complexity 4 157 0 470 245 61 94 chr10 16259370 16259615 -129329673 - L2 LINE L2 -1 3312 3076 2442 97 44 36 chr10 16259843 16260204 -129329084 + THE1B LTR MaLR 1 364 0 514 294 28 0 chr10 16261046 16261189 -129328099 + MIR SINE MIR 2 148 -114 1683 183 34 29 chr10 16261209 16261559 -129327729 + MER46B DNA MER2_type 10 236 0 1692 160 63 45 chr10 16261859 16262191 -129327097 + MER44D DNA MER2_type 2 609 0 1497 272 51 23 chr10 16262490 16262751 -129326537 - L1ME3A LINE L1 -15 6155 5903 2114 121 0 29 chr10 16262751 16263066 -129326222 - AluSg1 SINE Alu -3 306 1 1497 272 51 23 chr10 16263066 16263079 -129326209 - L1ME3A LINE L1 -267 5903 5567 470 283 39 63 chr10 16263079 16263365 -129325923 - L1MA6 LINE L1 -431 5869 5591 * 1276 290 132 28 chr10 16263343 16264113 -129325175 - L1MEd LINE L1 -3879 2250 1561 207 0 0 0 chr10 16264113 16264136 -129325152 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1276 290 132 28 chr10 16264136 16264664 -129324624 - L1MEd LINE L1 -4568 1561 817 1216 203 17 17 chr10 16265491 16265727 -129323561 - MER46A DNA MER2_type 0 236 1 195 407 0 0 chr10 16265961 16266047 -129323241 - MIR SINE MIR -114 148 63 1766 167 0 35 chr10 16266169 16266481 -129322807 + AluJo SINE Alu 1 301 -11 4718 188 61 39 chr10 16266490 16267580 -129321708 + L1MC3 LINE L1 6663 7775 -10 2020 96 4 0 chr10 16267624 16267884 -129321404 - AluSp SINE Alu -14 299 39 198 0 0 0 chr10 16267962 16267984 -129321304 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 1885 188 0 0 chr10 16268007 16268311 -129320977 - AluJo SINE Alu -8 304 1 210 118 0 0 chr10 16268717 16268751 -129320537 + (A)n Simple_repeat Simple_repeat 1 34 0 361 321 44 15 chr10 16268990 16269127 -129320161 - L2 LINE L2 0 3313 3173 1879 111 8 0 chr10 16269200 16269461 -129319827 - AluY SINE Alu -23 288 26 339 250 148 0 chr10 16269497 16269585 -129319703 - MIR SINE MIR -91 171 71 1031 181 30 55 chr10 16269587 16269824 -129319464 + AluJo SINE Alu 55 285 -27 2072 132 7 0 chr10 16269840 16270144 -129319144 + AluSx SINE Alu 1 306 -6 269 318 45 23 chr10 16270481 16270613 -129318675 + MLT1K LTR MaLR 111 245 -343 272 230 11 71 chr10 16270817 16270932 -129318356 + MLT1K LTR MaLR 484 611 -4 205 75 50 25 chr10 16271092 16271132 -129318156 + A-rich Low_complexity Low_complexity 2 42 0 966 93 0 93 chr10 16271841 16271991 -129317297 + AluSq SINE Alu 35 170 -143 457 101 29 0 chr10 16271991 16272060 -129317228 + Alu SINE Alu 228 298 -11 2084 114 28 0 chr10 16272993 16273282 -129316006 - AluSx SINE Alu -15 297 1 2043 138 0 0 chr10 16273789 16274114 -129315174 - AluSx SINE Alu 0 325 1 307 252 138 49 chr10 16274567 16274690 -129314598 - L2 LINE L2 -7 3265 3132 3316 93 81 10 chr10 16275021 16275513 -129313775 - L1PA13 LINE L1 -6 6157 5631 268 267 100 11 chr10 16275562 16275652 -129313636 - L2 LINE L2 -2 3270 3173 2523 155 34 12 chr10 16276767 16277180 -129312108 - MSTB LTR MaLR 0 426 5 22 0 0 0 chr10 16277999 16278021 -129311267 + AT_rich Low_complexity Low_complexity 1 22 0 258 354 77 8 chr10 16278416 16278546 -129310742 - MER5B DNA MER1_type -10 168 30 2350 102 0 0 chr10 16329749 16330054 -129259234 - AluSx SINE Alu -5 307 3 268 299 188 8 chr10 16331445 16331562 -129257726 - MIR SINE MIR -115 147 10 193 264 19 19 chr10 16331608 16331661 -129257627 + L3b LINE CR1 1250 1302 -281 26 64 0 0 chr10 16332071 16332118 -129257170 + AT_rich Low_complexity Low_complexity 1 47 0 321 367 26 30 chr10 16334296 16334566 -129254722 + L2 LINE L2 2697 2965 -349 759 220 120 10 chr10 16337192 16337392 -129251896 - MIR SINE MIR -10 252 31 23 0 0 0 chr10 16338119 16338142 -129251146 + AT_rich Low_complexity Low_complexity 1 23 0 242 327 10 58 chr10 16340596 16340700 -129248588 + L2 LINE L2 3137 3235 -37 180 0 0 0 chr10 16341230 16341250 -129248038 + (A)n Simple_repeat Simple_repeat 1 20 0 301 277 107 9 chr10 16342191 16342303 -129246985 + MER5A DNA MER1_type 7 129 -60 313 284 28 26 chr10 16342345 16342524 -129246764 + MIR SINE MIR 3 244 -18 356 327 114 29 chr10 16342822 16343343 -129245945 - L1ME4a LINE L1 -289 5832 5267 1716 157 7 30 chr10 16343827 16344132 -129245156 - AluJo SINE Alu -14 298 1 2377 100 3 0 chr10 16344139 16344448 -129244840 - AluSq SINE Alu -3 310 1 2347 91 0 0 chr10 16345051 16345348 -129243940 - AluY SINE Alu -14 297 1 2499 77 0 0 chr10 16346678 16346988 -129242300 + AluY SINE Alu 1 310 -1 274 299 39 3 chr10 16347098 16347200 -129242088 + MIR SINE MIR 40 144 -64 237 231 46 15 chr10 16347330 16347395 -129241893 - L2 LINE L2 -87 3185 3119 189 107 0 0 chr10 16347772 16347800 -129241488 + (T)n Simple_repeat Simple_repeat 1 28 0 532 303 151 60 chr10 16348043 16348284 -129241004 + L2 LINE L2 1602 1820 -1493 5599 135 68 30 chr10 16348284 16349316 -129239972 + MER11C LTR ERVK 1 1071 0 532 303 151 60 chr10 16349316 16350442 -129238846 + L2 LINE L2 1820 3096 -217 1589 179 67 24 chr10 16351096 16351425 -129237863 - MER2 DNA MER2_type 0 344 2 4841 213 48 30 chr10 16351588 16352786 -129236502 + Charlie1a DNA MER1_type 2 1220 -235 334 212 0 0 chr10 16352798 16352864 -129236424 + Charlie1a DNA MER1_type 1390 1455 0 186 247 0 135 chr10 16354094 16354183 -129235105 + MIR SINE MIR 116 192 -70 27 0 0 0 chr10 16354579 16354606 -129234682 + AT_rich Low_complexity Low_complexity 1 27 0 1347 315 37 8 chr10 16355169 16355678 -129233610 + L2 LINE L2 2545 3069 -244 250 294 78 39 chr10 16356799 16356952 -129232336 - MIR SINE MIR 0 262 104 433 173 0 0 chr10 16357171 16357246 -129232042 + AluY SINE Alu 126 200 -111 2041 142 0 3 chr10 16357382 16357685 -129231603 - AluSx SINE Alu -10 302 1 508 321 95 16 chr10 16357686 16358054 -129231234 - HERV16 LTR ERVL -4447 549 153 988 299 46 11 chr10 16358197 16358565 -129230723 - LTR16A LTR ERVL -63 387 7 2226 105 0 3 chr10 16358631 16358926 -129230362 + AluSc SINE Alu 1 294 -15 542 194 0 37 chr10 16358975 16359083 -129230205 + U13 snRNA snRNA 1 104 0 1943 155 0 3 chr10 16359098 16359401 -129229887 + AluJo SINE Alu 1 302 -10 310 330 40 73 chr10 16359405 16359775 -129229513 + HERV16 LTR ERVL 1727 2084 -2912 810 253 76 28 chr10 16359780 16359979 -129229309 - L1MEc LINE L1 -4132 2264 2076 198 0 0 0 chr10 16359979 16360001 -129229287 + (TTTTA)n Simple_repeat Simple_repeat 1 22 0 2158 107 0 0 chr10 16360001 16360281 -129229007 - AluSx SINE Alu -32 280 1 810 253 76 28 chr10 16360281 16360436 -129228852 - L1MEc LINE L1 -4319 2077 1892 1943 108 57 0 chr10 16360668 16360878 -129228410 - AluSp SINE Alu 0 346 113 186 71 0 0 chr10 16360878 16360906 -129228382 + (TTA)n Simple_repeat Simple_repeat 1 28 0 1943 108 57 0 chr10 16360906 16361007 -129228281 - AluSp SINE Alu -233 113 19 2150 178 31 7 chr10 16361129 16361551 -129227737 + MSTB1 LTR MaLR 1 432 0 228 324 83 23 chr10 16361587 16361803 -129227485 + L1ME4a LINE L1 2676 2904 -3242 2901 13 0 0 chr10 16362287 16362604 -129226684 + AluYb8 SINE Alu 1 317 -1 676 133 0 25 chr10 16362696 16362816 -129226472 + LTR9B LTR ERV1 445 561 -83 648 302 65 10 chr10 16363248 16363632 -129225656 + L1ME4a LINE L1 3787 4191 -1955 30 45 0 0 chr10 16363901 16363945 -129225343 + AT_rich Low_complexity Low_complexity 1 44 0 1932 115 0 4 chr10 16364088 16364357 -129224931 + AluSg SINE Alu 39 306 -4 412 231 68 41 chr10 16364512 16364659 -129224629 + L1ME4a LINE L1 5546 5696 -425 287 209 86 79 chr10 16364689 16364828 -129224460 + L1ME4a LINE L1 5759 5898 -223 327 25 0 0 chr10 16364831 16364871 -129224417 + (TG)n Simple_repeat Simple_repeat 1 40 0 210 148 52 44 chr10 16366462 16366597 -129222691 + (TATATG)n Simple_repeat Simple_repeat 3 138 0 * 373 154 19 49 chr10 16366564 16366726 -129222562 + (TA)n Simple_repeat Simple_repeat 2 158 0 233 127 42 42 chr10 16366782 16366853 -129222435 + (CATATA)n Simple_repeat Simple_repeat 3 73 0 2283 101 33 56 chr10 16367037 16367279 -129222009 + L1PA16 LINE L1 5780 6011 -155 2244 126 0 0 chr10 16367279 16367589 -129221699 + AluSx SINE Alu 1 310 -2 2283 101 33 56 chr10 16367589 16367741 -129221547 + L1PA16 LINE L1 6011 6165 -1 1585 198 128 17 chr10 16369172 16369577 -129219711 - MER66A LTR ERV1 0 478 29 204 365 12 12 chr10 16369708 16369793 -129219495 + L2 LINE L2 3187 3271 -1 249 327 20 10 chr10 16370977 16371078 -129218210 + L2 LINE L2 2717 2818 -496 193 264 220 0 chr10 16371211 16371302 -129217986 + L2 LINE L2 3162 3272 0 2379 107 0 0 chr10 16371314 16371624 -129217664 - AluSp SINE Alu -3 310 1 1465 214 118 65 chr10 16371681 16372284 -129217004 + MLT1E2 LTR MaLR 1 626 0 185 0 0 39 chr10 16372311 16372337 -129216951 + (TG)n Simple_repeat Simple_repeat 2 26 0 5662 84 18 5 chr10 16373103 16373887 -129215401 + L1PA11 LINE L1 5379 6172 -2 1458 6 0 0 chr10 16375518 16375677 -129213611 - AluYb8 SINE Alu -13 305 147 2217 106 0 0 chr10 16375998 16376282 -129213006 - AluSx SINE Alu -28 284 1 278 180 0 0 chr10 16376377 16376427 -129212861 - MER53 DNA DNA -3 186 137 638 149 18 0 chr10 16376431 16376545 -129212743 - AluY SINE Alu -1 310 195 417 219 81 0 chr10 16376546 16376669 -129212619 - MER53 DNA DNA -55 134 2 199 294 103 15 chr10 16376695 16376763 -129212525 + L2 LINE L2 3181 3254 -18 212 308 0 0 chr10 16377561 16377613 -129211675 + (CA)n Simple_repeat Simple_repeat 2 53 0 330 252 118 24 chr10 16377656 16377816 -129211472 + L1ME LINE L1 5398 5597 -524 186 43 0 0 chr10 16377816 16377839 -129211449 + (TA)n Simple_repeat Simple_repeat 1 23 0 330 252 118 24 chr10 16377839 16377876 -129211412 + L1ME LINE L1 5597 5629 -492 25 0 0 0 chr10 16378344 16378369 -129210919 + AT_rich Low_complexity Low_complexity 1 25 0 2072 100 0 56 chr10 16378895 16379216 -129210072 - AluSg SINE Alu -7 303 1 364 356 148 5 chr10 16380220 16380422 -129208866 + L2 LINE L2 3022 3252 -20 234 0 0 0 chr10 16381233 16381259 -129208029 + (T)n Simple_repeat Simple_repeat 1 26 0 1411 222 10 3 chr10 16382128 16382421 -129206867 - AluJo SINE Alu -7 295 1 577 321 36 40 chr10 16382820 16382915 -129206373 + MIR SINE MIR 15 109 -153 2395 87 3 0 chr10 16382915 16383214 -129206074 - AluSx SINE Alu -12 300 1 577 321 36 40 chr10 16383214 16383367 -129205921 + MIR SINE MIR 109 262 0 444 328 8 0 chr10 16383510 16383632 -129205656 - L2 LINE L2 -4 3268 3146 235 338 51 36 chr10 16384185 16384460 -129204828 - L1MEd LINE L1 -5290 829 551 1054 230 28 92 chr10 16385123 16385486 -129203802 + MLT1A1 LTR MaLR 1 442 -25 2430 225 109 35 chr10 16385542 16386297 -129202991 - L1ME2 LINE L1 -178 5986 5103 2122 101 33 16 chr10 16386297 16386603 -129202685 - AluY SINE Alu 0 311 1 2430 225 109 35 chr10 16386603 16386982 -129202306 - L1ME2 LINE L1 -1061 5103 4754 2195 188 166 2 chr10 16387026 16387473 -129201815 - MLT2B1 LTR ERVL 0 520 1 702 222 24 147 chr10 16387473 16387531 -129201757 - L1ME2 LINE L1 -1420 4726 4662 2188 131 46 8 chr10 16387531 16387882 -129201406 + THE1B LTR MaLR 1 364 0 702 222 24 147 chr10 16387882 16388333 -129200955 - L1ME2 LINE L1 -1484 4662 4280 1218 115 13 18 chr10 16388357 16388583 -129200705 - L1HS LINE L1 -13 6142 5918 42929 33 24 1 chr10 16388683 16394051 -129195237 - L1P1 LINE L1 -654 5501 8 1103 248 123 45 chr10 16394064 16394689 -129194599 - L1ME2 LINE L1 -1905 4241 3568 10559 207 56 20 chr10 16394699 16398545 -129190743 - L1M4 LINE L1 -816 5566 1490 2075 127 0 0 chr10 16398545 16398829 -129190459 - AluSx SINE Alu -26 286 3 10559 207 56 20 chr10 16398829 16400085 -129189203 - L1M4 LINE L1 -4892 1490 280 356 261 35 26 chr10 16400091 16400206 -129189082 - MIR SINE MIR -26 236 121 23 0 0 0 chr10 16400651 16400674 -129188614 + AT_rich Low_complexity Low_complexity 1 23 0 307 369 16 0 chr10 16400905 16401027 -129188261 + L2 LINE L2 3187 3310 -3 22 35 0 0 chr10 16401585 16401614 -129187674 + AT_rich Low_complexity Low_complexity 1 29 0 317 325 79 9 chr10 16402075 16402189 -129187099 - L2 LINE L2 -8 3305 3184 354 80 0 0 chr10 16402197 16402247 -129187041 + (CCAA)n Simple_repeat Simple_repeat 2 51 0 375 285 66 53 chr10 16402492 16403305 -129185983 - L1MC5 LINE L1 -287 7674 7000 337 229 28 56 chr10 16403356 16403500 -129185788 - L1MC4 LINE L1 -975 7067 6928 782 279 9 23 chr10 16403663 16403882 -129185406 + MER58A DNA MER1_type 4 219 -5 2137 62 0 4 chr10 16404053 16404311 -129184977 + AluY SINE Alu 35 291 -20 5310 110 20 8 chr10 16404315 16405107 -129184181 - L1PA13 LINE L1 -21 6142 5341 1547 185 28 21 chr10 16405807 16406105 -129183183 - L1M3 LINE L1 -402 5766 5477 376 141 42 0 chr10 16406105 16406166 -129183122 + L1MB1 LINE L1 6094 6167 -1 1547 185 28 21 chr10 16406166 16406215 -129183073 - L1M3 LINE L1 -691 5477 5430 28 0 0 0 chr10 16407463 16407491 -129181797 + AT_rich Low_complexity Low_complexity 1 28 0 243 0 0 0 chr10 16407522 16407549 -129181739 + (T)n Simple_repeat Simple_repeat 1 27 0 362 239 9 0 chr10 16407664 16407777 -129181511 + (TCCA)n Simple_repeat Simple_repeat 1 114 0 987 176 0 6 chr10 16408228 16408387 -129180901 - FAM SINE Alu -17 158 1 374 263 86 53 chr10 16408388 16408667 -129180621 - L1ME LINE L1 -678 5488 5195 2771 184 35 32 chr10 16408933 16409526 -129179762 - L1MC3 LINE L1 -3 7782 7188 1984 152 0 3 chr10 16409532 16409834 -129179454 - AluSx SINE Alu -11 301 1 281 264 11 23 chr10 16409850 16409937 -129179351 - MLT1F1 LTR MaLR -442 125 40 282 47 70 0 chr10 16409937 16409980 -129179308 - L1MC3 LINE L1 -684 7101 7056 315 244 30 15 chr10 16410469 16410590 -129178698 + (TA)n Simple_repeat Simple_repeat 1 126 -11 1990 165 12 6 chr10 16410590 16410936 -129178352 - MER7A DNA MER2_type 0 346 1 315 244 30 15 chr10 16410936 16410949 -129178339 + (TA)n Simple_repeat Simple_repeat 126 137 0 2589 103 0 14 chr10 16411722 16412089 -129177199 - THE1B LTR MaLR -2 362 1 204 225 0 0 chr10 16413466 16413506 -129175782 + CT-rich Low_complexity Low_complexity 2 41 0 462 273 0 0 chr10 16413508 16413782 -129175506 + (TA)n Simple_repeat Simple_repeat 1 274 0 1830 163 3 10 chr10 16413992 16414287 -129175001 + AluJo SINE Alu 1 293 -19 303 250 25 0 chr10 16414320 16414400 -129174888 + MER103 DNA DNA 21 102 -64 1283 172 39 7 chr10 16415154 16415439 -129173849 + L1MA4 LINE L1 6000 6293 -7 734 228 12 12 chr10 16416218 16416385 -129172903 - MLT1E LTR MaLR -2 591 425 3628 201 34 18 chr10 16416715 16417562 -129171726 - L1MB8 LINE L1 -1 6177 5317 1803 199 21 3 chr10 16417714 16418086 -129171202 - L1MB8 LINE L1 -944 5202 4824 2256 113 0 0 chr10 16418706 16419006 -129170282 + AluSx SINE Alu 1 300 -12 5015 140 11 6 chr10 16419441 16420255 -129169033 - L1PA13 LINE L1 0 6163 5346 1313 27 0 0 chr10 16420472 16420618 -129168670 + AluYa5 SINE Alu 1 146 -165 322 344 80 0 chr10 16421070 16421195 -129168093 + MIR3 SINE MIR 32 166 -42 337 319 162 22 chr10 16423402 16423631 -129165657 + MIR SINE MIR 2 262 0 226 185 0 62 chr10 16423833 16423921 -129165367 + T-rich Low_complexity Low_complexity 3 137 0 2320 84 7 0 chr10 16424770 16425066 -129164222 - AluSq SINE Alu -15 298 1 247 160 60 0 chr10 16426100 16426150 -129163138 + MER103 DNA DNA 26 78 -88 418 300 41 59 chr10 16426278 16426448 -129162840 + MIR3 SINE MIR 36 202 -6 418 236 28 9 chr10 16426678 16426784 -129162504 + L2 LINE L2 2309 2416 -898 1678 214 28 33 chr10 16427202 16427594 -129161694 + MLT1B LTR MaLR 1 390 0 5391 129 21 10 chr10 16427622 16428458 -129160830 - Tigger1 DNA MER2_type 0 2418 1573 893 278 74 5 chr10 16428457 16428741 -129160547 + MLT1F LTR MaLR 8 351 -244 * 274 312 141 53 chr10 16429014 16429184 -129160104 - LTR16A1 LTR ERVL -247 210 26 303 301 91 21 chr10 16429211 16429354 -129159934 + L1 LINE L1 4015 4167 -1979 1572 156 51 32 chr10 16429578 16429893 -129159395 - MER44D DNA MER2_type -15 594 4 293 268 129 60 chr10 16430419 16431006 -129158282 - L1MC5 LINE L1 -26 7935 7308 274 300 183 6 chr10 16431031 16431287 -129158001 - L1MC4 LINE L1 -568 7474 7161 485 266 91 38 chr10 16431299 16431717 -129157571 - L1MEd LINE L1 -3056 3073 2634 1052 179 0 0 chr10 16432229 16432408 -129156880 - AluJb SINE Alu -5 307 129 307 280 0 0 chr10 16432508 16432583 -129156705 + MIR SINE MIR 73 147 -115 236 217 0 0 chr10 16432603 16432649 -129156639 + Alu SINE Alu 13 58 -108 299 212 159 9 chr10 16432675 16432788 -129156500 - MIR SINE MIR -5 257 128 309 258 104 18 chr10 16432830 16432993 -129156295 + L1MEd LINE L1 8 184 -5935 21 0 0 0 chr10 16433201 16433222 -129156066 + AT_rich Low_complexity Low_complexity 1 21 0 643 268 73 30 chr10 16433246 16433794 -129155494 - L1MEd LINE L1 -4808 1502 896 238 24 0 49 chr10 16433905 16433946 -129155342 + (TTTTTG)n Simple_repeat Simple_repeat 4 42 0 507 316 66 81 chr10 16433977 16434509 -129154779 - L1MEd LINE L1 -5479 640 117 27946 86 7 12 chr10 16434565 16440738 -129148550 - L1PA6 LINE L1 -8 6146 11 195 42 0 0 chr10 16440753 16440777 -129148511 + (T)n Simple_repeat Simple_repeat 1 24 0 908 196 12 6 chr10 16442735 16442908 -129146380 - FAM SINE Alu -1 174 1 280 207 18 0 chr10 16442913 16443024 -129146264 + (TA)n Simple_repeat Simple_repeat 2 114 0 2293 85 0 0 chr10 16443024 16443307 -129145981 - AluSc SINE Alu -26 283 1 1268 227 43 32 chr10 16444097 16444472 -129144816 - MLT1B LTR MaLR -11 379 1 633 233 125 22 chr10 16444472 16444704 -129144584 - L1MC4 LINE L1 -466 7576 7321 667 357 38 20 chr10 16444742 16445190 -129144098 + HERV16 LTR ERVL 1070 1525 -3471 691 341 74 22 chr10 16445225 16445498 -129143790 - LTR16A LTR ERVL 0 450 148 1709 215 83 32 chr10 16445498 16445990 -129143298 - MLT2B1 LTR ERVL -1 519 3 691 341 74 22 chr10 16445990 16446121 -129143167 - LTR16A LTR ERVL -302 148 25 653 299 40 18 chr10 16446274 16446552 -129142736 - HERV16 LTR ERVL -4108 888 605 1228 161 5 0 chr10 16446653 16446839 -129142449 - AluSq SINE Alu -124 189 3 2472 66 0 3 chr10 16448036 16448339 -129140949 + AluY SINE Alu 5 306 -5 1649 217 3 3 chr10 16448505 16448804 -129140484 + AluJo SINE Alu 1 299 -13 904 197 44 6 chr10 16449595 16449778 -129139510 - AluJb SINE Alu -22 290 101 201 299 122 54 chr10 16450504 16450651 -129138637 - MIR SINE MIR -42 220 64 21 57 0 0 chr10 16450751 16450786 -129138502 + AT_rich Low_complexity Low_complexity 1 35 0 245 275 66 0 chr10 16450882 16450973 -129138315 + L1ME4a LINE L1 5486 5582 -660 373 304 92 29 chr10 16451116 16451323 -129137965 + L1ME4a LINE L1 5701 5920 -201 403 278 90 33 chr10 16451520 16451732 -129137556 - L2 LINE L2 0 3313 3090 197 356 98 23 chr10 16451885 16452017 -129137271 - L2 LINE L2 -408 2906 2765 3259 224 48 16 chr10 16452051 16452293 -129136995 + L1ME1 LINE L1 4382 4615 -1551 2150 113 0 17 chr10 16452293 16452594 -129136694 - AluSq SINE Alu -17 296 1 3259 224 48 16 chr10 16452594 16454082 -129135206 + L1ME1 LINE L1 4615 6162 -4 1740 109 34 69 chr10 16455397 16455443 -129133845 - L1PA15 LINE L1 0 6165 6119 2434 110 31 11 chr10 16455443 16455799 -129133489 + THE1B LTR MaLR 1 363 -1 1740 109 34 69 chr10 16455799 16456072 -129133216 - L1PA15 LINE L1 -46 6119 5857 2166 115 0 10 chr10 16456690 16456995 -129132293 - AluSc SINE Alu -7 302 1 253 276 263 6 chr10 16457026 16457182 -129132106 + MIR SINE MIR 54 249 -13 2190 56 0 0 chr10 16457825 16458092 -129131196 + AluY SINE Alu 44 310 -1 21 0 0 0 chr10 16458905 16458926 -129130362 + AT_rich Low_complexity Low_complexity 1 21 0 217 354 9 26 chr10 16461198 16461311 -129127977 - MIR3 SINE MIR -15 193 83 1595 194 31 0 chr10 16461316 16461610 -129127678 + AluJo SINE Alu 1 303 -9 2236 121 0 0 chr10 16462127 16462424 -129126864 + AluSx SINE Alu 1 297 -15 28 48 0 0 chr10 16462473 16462515 -129126773 + AT_rich Low_complexity Low_complexity 1 42 0 1337 237 74 4 chr10 16462589 16463075 -129126213 + L1M4 LINE L1 2615 3134 -3012 1276 234 45 32 chr10 16463074 16463539 -129125749 + L1MA9 LINE L1 5801 6271 -41 * 1111 244 95 5 chr10 16463571 16464085 -129125203 + L1M4 LINE L1 3141 3749 -2397 689 190 259 62 chr10 16464366 16464671 -129124617 + MLT1A1 LTR MaLR 1 365 0 270 136 0 0 chr10 16464726 16464770 -129124518 + (CA)n Simple_repeat Simple_repeat 2 45 0 675 291 112 0 chr10 16465280 16465503 -129123785 + MIR SINE MIR 3 250 -12 369 0 0 0 chr10 16467263 16467304 -129121984 + (CA)n Simple_repeat Simple_repeat 2 42 0 191 280 0 20 chr10 16467397 16467447 -129121841 - L2 LINE L2 -1 3271 3223 180 292 0 0 chr10 16467444 16467492 -129121796 - L2 LINE L2 -16 3297 3250 * 268 298 124 0 chr10 16467951 16468072 -129121216 + MIR SINE MIR 57 192 -70 2053 138 0 22 chr10 16468110 16468421 -129120867 + AluSx SINE Alu 1 304 -8 337 289 85 81 chr10 16470200 16470446 -129118842 + L1MC4a LINE L1 5689 5935 -1873 240 313 31 0 chr10 16470625 16470753 -129118535 + L1ME LINE L1 5601 5732 -389 204 135 0 0 chr10 16470903 16470940 -129118348 + (TA)n Simple_repeat Simple_repeat 1 37 0 373 175 93 0 chr10 16470980 16471077 -129118211 + L1ME4a LINE L1 6013 6118 -3 2847 7 0 0 chr10 16471236 16471544 -129117744 - AluYa5 SINE Alu -3 308 1 21 0 0 0 chr10 16471547 16471568 -129117720 + AT_rich Low_complexity Low_complexity 1 21 0 1725 204 0 3 chr10 16471651 16471936 -129117352 - AluJo SINE Alu -22 290 7 208 121 0 0 chr10 16472144 16472177 -129117111 + (TG)n Simple_repeat Simple_repeat 2 34 0 1170 114 0 0 chr10 16472427 16472594 -129116694 + AluSx SINE Alu 23 189 -123 25 68 5 0 chr10 16472907 16473019 -129116269 + AT_rich Low_complexity Low_complexity 1 67 0 2260 104 0 0 chr10 16473052 16473350 -129115938 - AluY SINE Alu -13 298 1 922 266 21 21 chr10 16474241 16474575 -129114713 + MARNA DNA Mariner 187 520 -66 305 277 32 32 chr10 16474788 16474943 -129114345 + L1ME LINE L1 5698 5852 -318 532 222 70 22 chr10 16475377 16475562 -129113726 + MER3 DNA MER1_type 16 209 0 29 70 0 0 chr10 16475731 16475788 -129113500 + AT_rich Low_complexity Low_complexity 1 57 0 180 268 196 0 chr10 16476109 16476165 -129113123 - MIR SINE MIR -61 147 81 1511 255 52 43 chr10 16476294 16476315 -129112973 - MLT1F LTR MaLR 0 542 523 2157 151 11 0 chr10 16476315 16476666 -129112622 - THE1A LTR MaLR 0 355 1 1511 255 52 43 chr10 16476666 16476991 -129112297 - MLT1F LTR MaLR -19 523 187 225 0 0 0 chr10 16476991 16477016 -129112272 + (GA)n Simple_repeat Simple_repeat 2 26 0 1511 255 52 43 chr10 16477016 16477205 -129112083 - MLT1F LTR MaLR -355 187 1 183 314 67 19 chr10 16477489 16477594 -129111694 + L2 LINE L2 1325 1434 -1880 1025 115 0 0 chr10 16479028 16479167 -129110121 + AluSq/x SINE Alu 1 139 -173 353 164 0 0 chr10 16479169 16479230 -129110058 + Alu SINE Alu 234 294 -8 503 328 80 43 chr10 16479296 16479622 -129109666 + L2 LINE L2 2637 2974 -340 368 314 34 0 chr10 16479675 16479793 -129109495 + L2 LINE L2 3192 3313 0 329 330 96 75 chr10 16480003 16480523 -129108765 + L2 LINE L2 2712 3269 -3 21 0 0 0 chr10 16480738 16480759 -129108529 + AT_rich Low_complexity Low_complexity 1 21 0 236 308 0 0 chr10 16481054 16481119 -129108169 + MIR SINE MIR 83 147 -61 2453 51 3 0 chr10 16482301 16482597 -129106691 + AluY SINE Alu 1 297 -14 4959 172 14 35 chr10 16482598 16483586 -129105702 - L1MB1 LINE L1 -7 6161 5154 706 97 44 0 chr10 16483586 16483699 -129105589 + L1PA13 LINE L1 6046 6163 0 4959 172 14 35 chr10 16483699 16483766 -129105522 - L1MB1 LINE L1 -1014 5154 5087 2332 105 0 0 chr10 16483766 16484070 -129105218 - AluSq SINE Alu -1 312 9 4959 172 14 35 chr10 16484070 16484568 -129104720 - L1MB1 LINE L1 -1081 5087 4653 1225 107 34 11 chr10 16484568 16484745 -129104543 - AluSg SINE Alu -129 181 1 637 322 19 0 chr10 16484902 16485107 -129104181 + MLT1I LTR MaLR 198 406 -3 340 307 35 95 chr10 16485156 16485385 -129103903 + MIR SINE MIR 47 261 -1 467 279 31 0 chr10 16485652 16485781 -129103507 + L2 LINE L2 1491 1623 -1691 2720 202 49 25 chr10 16486342 16486972 -129102316 - MER82 DNA MER2_type -8 645 1 1757 159 130 29 chr10 16487284 16487700 -129101588 - MLT2B1 LTR ERVL -62 458 1 2959 322 73 24 chr10 16488242 16488348 -129100940 + L2 LINE L2 107 206 -3108 2487 121 0 11 chr10 16488348 16488727 -129100561 + THE1C LTR MaLR 1 375 0 2959 322 73 24 chr10 16488727 16490067 -129099221 + L2 LINE L2 206 1623 -1691 369 0 0 0 chr10 16490528 16490569 -129098719 + (TG)n Simple_repeat Simple_repeat 2 42 0 318 271 169 0 chr10 16491802 16491920 -129097368 - L2 LINE L2 -5 3308 3171 330 232 0 0 chr10 16492111 16492167 -129097121 + LTR67 LTR ERVL 113 168 -389 455 235 110 7 chr10 16492273 16492409 -129096879 + LTR67 LTR ERVL 360 509 -48 1588 172 49 0 chr10 16492845 16493112 -129096176 - AluJb SINE Alu -12 300 21 326 154 0 15 chr10 16493142 16493207 -129096081 + (CATATA)n Simple_repeat Simple_repeat 3 66 0 5681 49 11 0 chr10 16493208 16493916 -129095372 - L1PA4 LINE L1 -11 6144 5429 3403 33 0 0 chr10 16493916 16494372 -129094916 + L1PA4 LINE L1 4976 5431 -723 901 259 37 27 chr10 16494603 16494897 -129094391 - L1MC4a LINE L1 -1917 5891 5595 2830 13 0 0 chr10 16494919 16495230 -129094058 - AluYa5 SINE Alu 0 311 1 21 0 0 0 chr10 16495233 16495254 -129094034 + AT_rich Low_complexity Low_complexity 1 21 0 1688 204 0 3 chr10 16495337 16495622 -129093666 - AluJo SINE Alu -22 290 7 208 121 0 0 chr10 16495830 16495863 -129093425 + (TG)n Simple_repeat Simple_repeat 2 34 0 1175 114 0 0 chr10 16496113 16496280 -129093008 + AluSx SINE Alu 23 189 -123 25 68 5 0 chr10 16496593 16496705 -129092583 + AT_rich Low_complexity Low_complexity 1 67 0 2249 104 0 0 chr10 16496738 16497036 -129092252 - AluY SINE Alu -13 298 1 1018 266 21 21 chr10 16497927 16498261 -129091027 + MARNA DNA Mariner 187 520 -66 231 311 67 25 chr10 16498354 16498473 -129090815 - LTR40b LTR ERVL -338 124 1 347 278 43 30 chr10 16498474 16498661 -129090627 + L1ME3A LINE L1 5695 5895 -271 588 222 70 22 chr10 16499063 16499248 -129090040 + MER3 DNA MER1_type 16 209 0 29 70 0 0 chr10 16499417 16499474 -129089814 + AT_rich Low_complexity Low_complexity 1 57 0 182 268 196 0 chr10 16499795 16499851 -129089437 - MIR SINE MIR -61 147 81 1677 255 52 43 chr10 16499980 16500001 -129089287 - MLT1F LTR MaLR 0 542 523 2160 151 11 0 chr10 16500001 16500352 -129088936 - THE1A LTR MaLR 0 355 1 1677 255 52 43 chr10 16500352 16500677 -129088611 - MLT1F LTR MaLR -19 523 187 225 0 0 0 chr10 16500677 16500702 -129088586 + (GA)n Simple_repeat Simple_repeat 2 26 0 1677 255 52 43 chr10 16500702 16500891 -129088397 - MLT1F LTR MaLR -355 187 1 183 314 67 19 chr10 16501175 16501280 -129088008 + L2 LINE L2 1325 1434 -1880 1012 115 0 0 chr10 16502795 16502934 -129086354 + AluSq/x SINE Alu 1 139 -173 373 164 0 0 chr10 16502936 16502997 -129086291 + Alu SINE Alu 234 294 -8 485 328 80 43 chr10 16503063 16503389 -129085899 + L2 LINE L2 2637 2974 -340 370 314 34 0 chr10 16503442 16503560 -129085728 + L2 LINE L2 3192 3313 0 327 330 96 75 chr10 16503770 16504290 -129084998 + L2 LINE L2 2712 3269 -3 21 0 0 0 chr10 16504505 16504526 -129084762 + AT_rich Low_complexity Low_complexity 1 21 0 234 308 0 0 chr10 16504821 16504886 -129084402 + MIR SINE MIR 83 147 -61 2458 51 3 0 chr10 16506068 16506364 -129082924 + AluY SINE Alu 1 297 -14 5245 169 15 31 chr10 16506365 16507353 -129081935 - L1MB1 LINE L1 -7 6161 5159 711 97 44 0 chr10 16507353 16507466 -129081822 + L1PA13 LINE L1 6046 6163 0 5245 169 15 31 chr10 16507466 16507533 -129081755 - L1MB1 LINE L1 -1009 5159 5092 2306 105 0 0 chr10 16507533 16507837 -129081451 - AluSq SINE Alu -1 312 9 5245 169 15 31 chr10 16507837 16508613 -129080675 - L1MB1 LINE L1 -1076 5092 4369 471 335 116 9 chr10 16508747 16508971 -129080317 - MIR SINE MIR -6 256 9 375 314 23 41 chr10 16509244 16509416 -129079872 - MIR3 SINE MIR -14 194 26 1852 137 18 36 chr10 16509596 16509931 -129079357 + L1PA16 LINE L1 5835 6163 -3 413 90 0 45 chr10 16510157 16510224 -129079064 - L1PA13 LINE L1 -11 6152 6089 1112 146 38 42 chr10 16510412 16510673 -129078615 + L1MA1 LINE L1 6031 6290 -12 32 26 0 0 chr10 16510675 16510714 -129078574 + AT_rich Low_complexity Low_complexity 1 39 0 378 0 0 0 chr10 16510819 16510861 -129078427 + (CA)n Simple_repeat Simple_repeat 1 42 0 22 56 0 0 chr10 16511825 16511861 -129077427 + AT_rich Low_complexity Low_complexity 1 36 0 570 311 109 8 chr10 16512833 16513071 -129076217 + MIR SINE MIR 1 262 0 284 250 60 17 chr10 16513302 16513418 -129075870 + L1MCc LINE L1 30 150 -6273 1219 254 82 28 chr10 16513422 16513968 -129075320 + L1MCc LINE L1 1035 1633 -4887 1453 254 75 64 chr10 16513983 16515367 -129073921 + L1MCc LINE L1 2291 3653 -3288 * 1774 245 45 21 chr10 16515361 16515990 -129073298 + L1M4 LINE L1 4724 5367 -779 432 291 80 19 chr10 16515992 16516413 -129072875 + L1ME1 LINE L1 1395 1996 -4829 929 158 0 0 chr10 16516416 16516562 -129072726 - L1PB4 LINE L1 -7 6149 6004 661 179 8 8 chr10 16516884 16517007 -129072281 + FLAM_C SINE Alu 1 123 -20 595 308 56 15 chr10 16517065 16517635 -129071653 + L1ME1 LINE L1 2462 3015 -3629 382 273 45 64 chr10 16517797 16518061 -129071227 - L1ME1 LINE L1 -2195 4449 4191 910 272 129 36 chr10 16518061 16518704 -129070584 + L1ME1 LINE L1 4450 5152 -1492 542 292 151 31 chr10 16519145 16519443 -129069845 + L1ME1 LINE L1 5771 6032 -634 1598 191 90 0 chr10 16519443 16519778 -129069510 + MER47A DNA MER2_type 2 366 0 542 292 151 31 chr10 16519778 16520040 -129069248 + L1ME1 LINE L1 6032 6385 -281 356 303 111 59 chr10 16520599 16521071 -129068217 - L2 LINE L2 -883 2431 1985 4114 114 3 5 chr10 16521071 16521692 -129067596 + L1PA14 LINE L1 5535 6154 -7 225 0 0 0 chr10 16521692 16521717 -129067571 + (CA)n Simple_repeat Simple_repeat 2 26 0 356 303 111 59 chr10 16521717 16521765 -129067523 - L2 LINE L2 -1328 1986 1883 1540 153 4 7 chr10 16521936 16522217 -129067071 + L1PA14 LINE L1 5875 6154 -7 225 0 0 0 chr10 16522217 16522242 -129067046 + (CA)n Simple_repeat Simple_repeat 2 26 0 736 143 0 0 chr10 16523405 16523510 -129065778 - AluSq/x SINE Alu -208 105 1 1711 177 0 24 chr10 16523759 16524047 -129065241 + AluJo SINE Alu 1 281 -31 314 329 63 50 chr10 16524348 16524570 -129064718 + L3 LINE CR1 1322 1546 -31 1777 238 60 7 chr10 16525343 16525571 -129063717 - MLT1D LTR MaLR 0 505 291 1667 108 67 131 chr10 16525571 16525959 -129063329 + THE1B LTR MaLR 1 363 -1 1777 238 60 7 chr10 16525959 16526146 -129063142 - MLT1D LTR MaLR -214 291 68 227 109 196 0 chr10 16526150 16526196 -129063092 + MADE1 DNA Mariner 1 55 -25 245 170 0 0 chr10 16526321 16526368 -129062920 - MADE1 DNA Mariner -33 47 1 251 257 9 24 chr10 16528119 16528297 -129060991 + GA-rich Low_complexity Low_complexity 1 175 0 429 193 8 9 chr10 16529733 16529823 -129059465 - MER58A DNA MER1_type -17 90 1 611 162 10 0 chr10 16530014 16530113 -129059175 - MER66B LTR ERV1 -7 479 380 7368 37 7 0 chr10 16530129 16531021 -129058267 - L1PA5 LINE L1 -3 6151 5254 826 208 117 10 chr10 16531025 16531222 -129058066 - MER66A LTR ERV1 -92 386 169 467 170 57 92 chr10 16531198 16531339 -129057949 - MER41A LTR ERV1 -252 302 167 * 298 121 0 69 chr10 16532156 16532214 -129057074 + MIR SINE MIR 121 174 -88 1921 176 0 0 chr10 16533657 16533969 -129055319 + AluJb SINE Alu 1 312 0 275 236 39 94 chr10 16534055 16534182 -129055106 + MER94 DNA DNA 1 120 -14 425 372 54 4 chr10 16534408 16534647 -129054641 + HAL1b LINE L1 671 921 -427 22 0 0 0 chr10 16534800 16534822 -129054466 + AT_rich Low_complexity Low_complexity 1 22 0 524 283 167 32 chr10 16534918 16535130 -129054158 + L1MC/D LINE L1 5272 5541 -2267 2891 152 22 2 chr10 16535130 16535638 -129053650 - L1MC1 LINE L1 -1 6332 5815 524 283 167 32 chr10 16535638 16535736 -129053552 + L1MC/D LINE L1 5541 5624 -2184 2041 145 0 7 chr10 16536016 16536313 -129052975 + AluJb SINE Alu 1 295 -17 187 200 22 0 chr10 16536359 16536404 -129052884 - L2 LINE L2 0 3313 3268 4814 222 97 48 chr10 16538374 16538464 -129050824 - L1MDa LINE L1 -4352 2188 2104 1773 186 42 0 chr10 16538464 16538797 -129050491 + MER7A DNA MER2_type 1 345 -1 4814 222 97 48 chr10 16538797 16539558 -129049730 - L1MDa LINE L1 -4436 2104 1382 1470 183 60 30 chr10 16539558 16539858 -129049430 - AluJb SINE Alu -3 309 1 4814 222 97 48 chr10 16539858 16539933 -129049355 - L1MDa LINE L1 -5158 1382 1312 1780 126 26 19 chr10 16539933 16540204 -129049084 - AluJb SINE Alu -21 291 19 1080 150 0 23 chr10 16540049 16540222 -129049066 - AluJb SINE Alu -143 169 1 * 4814 222 97 48 chr10 16540222 16541103 -129048185 - L1MDa LINE L1 -5246 1294 459 288 0 0 0 chr10 16541103 16541135 -129048153 + (TTG)n Simple_repeat Simple_repeat 2 33 0 1718 180 0 23 chr10 16541137 16541437 -129047851 - AluSx SINE Alu -19 293 1 4814 222 97 48 chr10 16541437 16541539 -129047749 - L1MDa LINE L1 -6081 459 13 413 351 59 28 chr10 16541614 16541902 -129047386 - HAL1b LINE L1 -613 735 439 2273 175 24 14 chr10 16544657 16545079 -129044209 + MSTB LTR MaLR 1 426 0 1696 16 0 0 chr10 16545486 16545680 -129043608 + L1PA3 LINE L1 5962 6155 0 867 205 51 0 chr10 16546353 16546548 -129042740 - Tigger1 DNA MER2_type -2213 205 1 2189 208 46 7 chr10 16546553 16547097 -129042191 - L1MCa LINE L1 -5842 584 20 2292 100 0 3 chr10 16547319 16547629 -129041659 - AluSc SINE Alu 0 309 1 964 79 0 0 chr10 16547858 16547985 -129041303 - AluY SINE Alu -184 127 1 3217 208 51 11 chr10 16547986 16549364 -129039924 - L1M4 LINE L1 -400 5778 4348 4057 138 17 9 chr10 16549383 16549546 -129039742 - L1PA16 LINE L1 -1 6165 6005 2512 94 0 76 chr10 16549546 16549940 -129039348 - THE1B LTR MaLR 0 364 1 4057 138 17 9 chr10 16549940 16550471 -129038817 - L1PA16 LINE L1 -161 6005 5465 1255 219 52 39 chr10 16550471 16550920 -129038368 + MLT2B1 LTR ERVL 2 509 -11 3025 250 42 4 chr10 16550948 16551704 -129037584 + ERVL-B1 LTR ERVL 27 811 -4953 249 122 0 75 chr10 16551704 16551777 -129037511 - L1M4 LINE L1 -2220 3926 3859 1848 257 67 19 chr10 16551779 16551793 -129037495 - L1M4 LINE L1 -2937 3209 3197 2572 80 26 0 chr10 16551793 16552144 -129037144 + L1PA13 LINE L1 5803 6162 -1 1848 257 67 19 chr10 16552144 16553078 -129036210 - L1M4 LINE L1 -2949 3197 2215 414 264 72 47 chr10 16553292 16553341 -129035947 - L1M4 LINE L1 -2952 3194 3148 890 185 14 28 chr10 16553341 16553557 -129035731 - L1MA10 LINE L1 -13 6321 6109 414 264 72 47 chr10 16553557 16553742 -129035546 - L1M4 LINE L1 -2998 3148 2954 2476 77 0 6 chr10 16554815 16555127 -129034161 - AluY SINE Alu -1 310 1 666 298 54 6 chr10 16555136 16555468 -129033820 - L1M4 LINE L1 -3265 2881 2534 630 140 19 121 chr10 16555468 16555625 -129033663 - MER6 DNA MER2_type 0 865 4 24 0 0 0 chr10 16555928 16555952 -129033336 + AT_rich Low_complexity Low_complexity 1 24 0 384 306 165 6 chr10 16556007 16556177 -129033111 + MIR SINE MIR 18 214 -48 1882 171 0 10 chr10 16556217 16556522 -129032766 - AluJb SINE Alu -9 303 2 1965 122 16 36 chr10 16557733 16558037 -129031251 - AluSg SINE Alu -12 298 1 942 298 116 17 chr10 16559149 16559502 -129029786 - L2 LINE L2 -2719 595 208 1867 147 7 17 chr10 16559898 16560198 -129029090 + AluSx SINE Alu 1 297 -15 239 313 31 0 chr10 16560503 16560567 -129028721 + (CATG)n Simple_repeat Simple_repeat 2 67 0 792 143 16 0 chr10 16561097 16561223 -129028065 + BC200 scRNA scRNA 2 129 -71 219 36 0 0 chr10 16561225 16561253 -129028035 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 2214 96 0 0 chr10 16562427 16562718 -129026570 + AluSg SINE Alu 1 291 -19 1100 199 111 20 chr10 16562723 16563075 -129026213 + L1MB8 LINE L1 5780 6163 -15 6132 154 52 87 chr10 16563141 16563255 -129026033 + L1MCa LINE L1 20 136 -6290 3808 29 0 0 chr10 16563255 16563704 -129025584 + L1PA4 LINE L1 5704 6152 -3 6132 154 52 87 chr10 16563704 16564779 -129024509 + L1MCa LINE L1 136 1147 -5279 1640 43 10 0 chr10 16564779 16565020 -129024268 + L1PA4 LINE L1 5938 6180 0 6132 154 52 87 chr10 16565020 16565358 -129023930 + L1MCa LINE L1 1147 1495 -4931 335 274 42 0 chr10 16565420 16565515 -129023773 + L1MCa LINE L1 2636 2734 -3873 2366 93 0 0 chr10 16566402 16566704 -129022584 + AluSg SINE Alu 1 302 -8 180 0 0 0 chr10 16566810 16566830 -129022458 + (TTTAA)n Simple_repeat Simple_repeat 1 20 0 3022 93 7 2 chr10 16566830 16567259 -129022029 - L1PA10 LINE L1 -21 6147 5717 287 262 79 43 chr10 16567283 16567447 -129021841 - MLT1L LTR MaLR -13 602 433 281 233 0 0 chr10 16567837 16567897 -129021391 + MLT1I LTR MaLR 93 152 -257 283 349 48 18 chr10 16567958 16568124 -129021164 + MLT1J2 LTR MaLR 241 411 -39 1166 157 0 0 chr10 16568149 16568327 -129020961 - AluSg/x SINE Alu -1 309 132 4161 94 14 2 chr10 16568363 16568950 -129020338 + L1PA10 LINE L1 5575 6168 0 1278 142 5 19 chr10 16568955 16569166 -129020122 + AluSg/x SINE Alu 81 288 -24 570 236 54 49 chr10 16569211 16569531 -129019757 + MSTD LTR MaLR 1 324 -41 581 178 25 0 chr10 16569720 16569838 -129019450 + MSTD LTR MaLR 276 396 0 7313 39 0 0 chr10 16569882 16571154 -129018134 - L1PA4 LINE L1 -8 6147 4874 255 93 0 0 chr10 16571712 16571755 -129017533 + (A)n Simple_repeat Simple_repeat 1 43 0 3996 200 11 55 chr10 16571987 16572877 -129016411 + L1 LINE L1 3320 4248 -1898 5881 115 13 6 chr10 16572877 16573196 -129016092 + L1PA14 LINE L1 4869 5184 -977 224 29 0 29 chr10 16573196 16573230 -129016058 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 5881 115 13 6 chr10 16573230 16573878 -129015410 + L1PA14 LINE L1 5184 5839 -322 2517 71 0 3 chr10 16573878 16574189 -129015099 + AluY SINE Alu 1 310 -1 5881 115 13 6 chr10 16574189 16574511 -129014777 + L1PA14 LINE L1 5839 6157 -4 3996 200 11 55 chr10 16574511 16574666 -129014622 + L1 LINE L1 4248 4318 -1828 1348 290 20 26 chr10 16574839 16575294 -129013994 + L1M3a LINE L1 1 452 -5503 1514 304 71 34 chr10 16575408 16576427 -129012861 + L1M3a LINE L1 302 1038 -4917 2094 135 0 0 chr10 16576460 16576749 -129012539 + AluSx SINE Alu 2 290 -22 879 200 0 0 chr10 16577760 16577920 -129011368 + L1PB4 LINE L1 5992 6151 -5 422 295 16 0 chr10 16578302 16578424 -129010864 - MLT1I LTR MaLR -219 190 67 2725 42 0 0 chr10 16578583 16578894 -129010394 + AluY SINE Alu 1 311 0 2085 133 0 0 chr10 16578899 16579216 -129010072 + L1PA14 LINE L1 5841 6157 -4 929 196 27 9 chr10 16579218 16579443 -129009845 + L1M3 LINE L1 4162 4390 -1756 1943 161 65 13 chr10 16579459 16579910 -129009378 + L1M3 LINE L1 5197 5673 -495 1254 136 54 54 chr10 16579915 16580194 -129009094 - Tigger2a DNA MER2_type -155 279 1 256 393 34 0 chr10 16580237 16580354 -129008934 + L2 LINE L2 3151 3271 -1 1726 135 0 43 chr10 16580753 16581078 -129008210 + L1MB1 LINE L1 5660 5970 -198 3464 221 69 10 chr10 16581081 16582805 -129006483 + L1PA11 LINE L1 4295 6154 -20 2323 124 13 3 chr10 16582806 16583184 -129006104 + L1PB2 LINE L1 5768 6149 -2 805 201 5 82 chr10 16583196 16583366 -129005922 + L1MB1 LINE L1 5966 6117 -51 1834 176 0 0 chr10 16583366 16583667 -129005621 + AluJo SINE Alu 9 309 -3 805 201 5 82 chr10 16583667 16583715 -129005573 + L1MB1 LINE L1 6117 6167 -1 269 192 0 68 chr10 16584475 16584548 -129004740 + (TATG)n Simple_repeat Simple_repeat 2 69 0 31 58 0 0 chr10 16584768 16584820 -129004468 + AT_rich Low_complexity Low_complexity 1 52 0 23 0 0 0 chr10 16584881 16584904 -129004384 + AT_rich Low_complexity Low_complexity 1 23 0 363 327 77 14 chr10 16585005 16585302 -129003986 + L1ME1 LINE L1 35 350 -6046 2131 147 0 0 chr10 16585414 16585727 -129003561 + AluSq SINE Alu 1 313 0 4242 220 47 23 chr10 16585891 16587256 -129002032 + L1ME1 LINE L1 3004 4401 -1814 1795 233 70 7 chr10 16587328 16587882 -129001406 + L1ME1 LINE L1 5643 6231 -4 380 295 16 0 chr10 16587910 16588039 -129001249 + L1ME2 LINE L1 3951 4081 -2065 600 228 54 81 chr10 16588055 16588217 -129001071 + L1ME2 LINE L1 5078 5243 -921 4433 23 0 0 chr10 16588217 16588734 -129000554 + L1PA3 LINE L1 5637 6153 -2 600 228 54 81 chr10 16588734 16588979 -129000309 + L1ME2 LINE L1 5243 5472 -692 * 1143 263 34 0 chr10 16588976 16589326 -128999962 + L1ME2 LINE L1 5727 6088 -76 601 289 69 39 chr10 16589381 16589745 -128999543 + L1MC/D LINE L1 5422 5796 -2012 21 82 0 0 chr10 16589955 16590004 -128999284 + AT_rich Low_complexity Low_complexity 1 49 0 327 256 58 44 chr10 16590509 16590646 -128998642 + L1M4 LINE L1 3685 3823 -2323 253 340 44 19 chr10 16591063 16591269 -128998019 + ERVL LTR ERVL 1765 1975 -3789 1144 220 138 40 chr10 16591789 16592194 -128997094 + MSTB2 LTR MaLR 1 445 -12 305 287 57 25 chr10 16592710 16592832 -128996456 + L1MEd LINE L1 976 1101 -5018 2155 86 0 0 chr10 16592891 16593159 -128996129 + AluSc SINE Alu 23 290 -19 1940 112 0 4 chr10 16593329 16593598 -128995690 + AluSc SINE Alu 23 290 -19 348 306 50 0 chr10 16593598 16593712 -128995576 + L1MEd LINE L1 1080 1202 -4929 879 245 102 71 chr10 16593734 16594434 -128994854 - L1MDa LINE L1 -4268 2854 2046 1667 207 3 10 chr10 16594434 16594739 -128994549 - AluJo SINE Alu -7 305 3 879 245 102 71 chr10 16594739 16595093 -128994195 - L1MDa LINE L1 -5076 2046 1704 240 326 23 23 chr10 16595264 16595436 -128993852 - L1MDa LINE L1 -5072 1351 1180 372 43 0 0 chr10 16595540 16595586 -128993702 + (TC)n Simple_repeat Simple_repeat 1 46 0 399 340 95 42 chr10 16596172 16596413 -128992875 + MIR SINE MIR 9 262 0 420 111 0 0 chr10 16598242 16598305 -128990983 + (TA)n Simple_repeat Simple_repeat 2 64 0 22 35 0 0 chr10 16598359 16598388 -128990900 + AT_rich Low_complexity Low_complexity 1 29 0 477 248 72 8 chr10 16598794 16598919 -128990369 - MIR SINE MIR -13 249 117 569 258 6 53 chr10 16599582 16599791 -128989497 + MIR SINE MIR 20 217 -45 1790 103 3 142 chr10 16600378 16600738 -128988550 + AluSg SINE Alu 1 310 0 24 53 0 0 chr10 16601466 16601504 -128987784 + AT_rich Low_complexity Low_complexity 1 38 0 2294 101 3 0 chr10 16601824 16602122 -128987166 - AluSq SINE Alu -14 299 1 2086 203 8 51 chr10 16602181 16602504 -128986784 + MLT1D LTR MaLR 1 294 -211 1343 112 4 116 chr10 16602504 16602663 -128986625 + MER30 DNA MER1_type 1 122 -108 2215 102 0 20 chr10 16602663 16602967 -128986321 + AluSx SINE Alu 4 301 -11 1343 112 4 116 chr10 16602967 16603065 -128986223 + MER30 DNA MER1_type 122 229 -1 2086 203 8 51 chr10 16603065 16603269 -128986019 + MLT1D LTR MaLR 294 505 0 22 0 0 0 chr10 16603350 16603372 -128985916 + GC_rich Low_complexity Low_complexity 1 22 0 377 269 84 42 chr10 16604062 16604229 -128985059 + MIR SINE MIR 79 252 -10 762 172 8 0 chr10 16604739 16604867 -128984421 + FLAM_C SINE Alu 1 129 -4 2239 171 68 46 chr10 16604984 16605480 -128983808 - MER67D LTR ERV1 -4 510 4 363 71 0 5 chr10 16607609 16607665 -128981623 - MLT2B3 LTR ERVL 0 554 411 2648 176 6 45 chr10 16607716 16608245 -128981043 - MLT2B3 LTR ERVL -46 508 1 385 256 17 17 chr10 16608252 16608369 -128980919 + MIR3 SINE MIR 83 199 -9 22 0 0 0 chr10 16609154 16609176 -128980112 + GC_rich Low_complexity Low_complexity 1 22 0 1814 136 55 0 chr10 16612267 16612575 -128976713 + MER1A DNA MER1_type 204 528 -1 489 299 20 7 chr10 16612594 16612741 -128976547 - MLT2E LTR ERVL -477 151 3 3222 128 28 26 chr10 16613749 16614325 -128974963 - MER41B LTR ERV1 -15 620 44 3225 84 16 7 chr10 16615789 16616229 -128973059 + MLT2A1 LTR ERVL 1 444 0 1193 223 50 60 chr10 16616429 16616676 -128972612 - MLT1B LTR MaLR -2 388 145 1899 157 0 7 chr10 16616676 16616957 -128972331 + AluSx SINE Alu 2 280 -32 1193 223 50 60 chr10 16616957 16617091 -128972197 - MLT1B LTR MaLR -245 145 11 2051 130 7 10 chr10 16618570 16618877 -128970411 + AluSg SINE Alu 1 306 -4 17272 33 2 1 chr10 16618951 16621807 -128967481 - L1PA3 LINE L1 -3 6152 3296 6989 25 1 0 chr10 16621807 16622693 -128966595 + L1PA3 LINE L1 2399 3285 -2861 265 294 20 26 chr10 16622820 16622973 -128966315 - MER104 DNA Tc2 -27 153 2 633 236 124 32 chr10 16623006 16623359 -128965929 + LTR50 LTR ERVL 140 605 -190 2450 112 3 0 chr10 16623378 16623734 -128965554 - THE1B LTR MaLR -7 357 1 249 212 94 0 chr10 16623770 16623855 -128965433 + LTR50 LTR ERVL 695 787 -8 581 248 48 61 chr10 16624407 16624730 -128964558 + L1ME3A LINE L1 1069 1401 -5039 21 0 0 0 chr10 16624730 16624751 -128964537 + AT_rich Low_complexity Low_complexity 1 21 0 215 254 79 0 chr10 16624789 16624852 -128964436 - MER5A DNA MER1_type -22 167 100 187 255 106 0 chr10 16624983 16625030 -128964258 + L2 LINE L2 3158 3209 -63 800 296 47 51 chr10 16625037 16625375 -128963913 + L1ME3A LINE L1 4755 5092 -1314 2544 39 10 10 chr10 16625375 16625686 -128963602 + AluY SINE Alu 1 311 0 800 296 47 51 chr10 16625686 16625841 -128963447 + L1ME3A LINE L1 5092 5246 -1160 21 0 0 0 chr10 16626032 16626053 -128963235 + AT_rich Low_complexity Low_complexity 1 21 0 207 0 0 0 chr10 16626053 16626076 -128963212 + (CA)n Simple_repeat Simple_repeat 2 24 0 1808 286 93 3 chr10 16626127 16626721 -128962567 + L1ME3A LINE L1 5555 6238 -192 2299 122 0 0 chr10 16626721 16627032 -128962256 + AluSq SINE Alu 1 311 -2 1808 286 93 3 chr10 16627032 16627220 -128962068 + L1ME3A LINE L1 6238 6408 -22 256 185 31 0 chr10 16627489 16627554 -128961734 + HAL1 LINE L1 2310 2376 -131 617 240 96 24 chr10 16627606 16627814 -128961474 - MER58A DNA MER1_type -1 223 1 35 71 0 0 chr10 16627828 16627898 -128961390 + AT_rich Low_complexity Low_complexity 1 70 0 1372 155 30 15 chr10 16627988 16628253 -128961035 + L1MB1 LINE L1 5406 5674 -494 3983 99 24 10 chr10 16628283 16628867 -128960421 - L1PA10 LINE L1 -10 6158 5567 2553 161 58 8 chr10 16628867 16629352 -128959936 + L1MB1 LINE L1 5660 6168 0 381 227 80 0 chr10 16629391 16629567 -128959721 - Charlie2 DNA MER1_type -249 2613 2424 13701 101 1 15 chr10 16629667 16631765 -128957523 + L1PA6 LINE L1 615 2682 -3464 20182 62 9 2 chr10 16631945 16635381 -128953907 + L1PA6 LINE L1 2706 6148 -6 326 80 40 0 chr10 16635395 16635445 -128953843 + MLT2A1 LTR ERVL 393 444 0 25534 105 11 6 chr10 16635445 16639136 -128950152 + HERVL-A1 LTR ERVL 1 3710 -1944 2314 101 0 3 chr10 16639138 16639444 -128949844 - AluSx SINE Alu -7 305 1 1042 119 0 0 chr10 16639450 16639584 -128949704 - AluSg SINE Alu -174 136 3 1452 108 5 0 chr10 16639585 16639799 -128949489 + HERVL-A1 LTR ERVL 3709 3923 -1731 2239 134 3 21 chr10 16639902 16640283 -128949005 - MER4D LTR ERV1 -528 375 2 2251 176 18 18 chr10 16640373 16640821 -128948467 + MLT2B2 LTR ERVL 5 452 -63 997 166 270 10 chr10 16640831 16641120 -128948168 - MER47A DNA MER2_type -2 364 1 198 167 0 0 chr10 16641122 16641158 -128948130 + (TG)n Simple_repeat Simple_repeat 1 36 0 279 159 111 0 chr10 16641161 16641224 -128948064 + MLT2B2 LTR ERVL 451 520 0 1405 249 57 10 chr10 16641225 16641614 -128947674 + ERVL LTR ERVL 2 408 -5356 1357 181 0 0 chr10 16641614 16641830 -128947458 + AluSg/x SINE Alu 85 300 -10 4943 190 24 30 chr10 16641852 16642435 -128946853 + ERVL LTR ERVL 401 980 -4784 2009 141 7 3 chr10 16642435 16642739 -128946549 - AluSg SINE Alu -5 305 1 4943 190 24 30 chr10 16642739 16643224 -128946064 + ERVL LTR ERVL 980 1467 -4297 327 236 14 0 chr10 16643445 16643517 -128945771 - LTR43 LTR ERV1 -307 295 223 4278 210 29 10 chr10 16643758 16643972 -128945316 + ERVL LTR ERVL 1460 1669 -4095 3087 107 34 0 chr10 16643972 16644017 -128945271 - MLT2A2 LTR ERVL 0 453 411 330 26 0 0 chr10 16644017 16644056 -128945232 + (TG)n Simple_repeat Simple_repeat 2 40 0 243 0 0 0 chr10 16644055 16644082 -128945206 + (TA)n Simple_repeat Simple_repeat 2 28 0 * 3087 107 34 0 chr10 16644056 16644474 -128944814 - MLT2A2 LTR ERVL -42 411 1 4278 210 29 10 chr10 16644474 16645122 -128944166 + ERVL LTR ERVL 1669 2338 -3426 1838 153 60 0 chr10 16645116 16645417 -128943871 - ERVL LTR ERVL -2062 3702 3384 * 1557 151 28 8 chr10 16645414 16645665 -128943623 + ERVL LTR ERVL 4652 4907 -857 * 2579 144 0 3 chr10 16645675 16646064 -128943224 + ERVL LTR ERVL 2336 2723 -3041 2388 190 65 7 chr10 16646071 16646514 -128942774 - MER21B LTR ERV1 -371 492 24 4020 169 32 9 chr10 16646514 16647416 -128941872 + ERVL LTR ERVL 1999 3412 -2352 5633 172 50 13 chr10 16647418 16648449 -128940839 + ERVL LTR ERVL 3372 4441 -1323 5394 173 17 51 chr10 16648549 16649629 -128939659 + ERVL LTR ERVL 4433 5475 -289 268 346 8 8 chr10 16649633 16649760 -128939528 - L2 LINE L2 -1408 1906 1780 3585 186 24 52 chr10 16651547 16651804 -128937484 + L1MC3 LINE L1 6471 6734 -1051 848 60 0 9 chr10 16651804 16651920 -128937368 + (TTTC)n Simple_repeat Simple_repeat 2 116 0 1502 158 18 35 chr10 16651923 16652208 -128937080 - AluJo SINE Alu -32 280 1 3585 186 24 52 chr10 16652208 16652756 -128936532 + L1MC3 LINE L1 6736 7257 -528 310 295 124 3 chr10 16653634 16653932 -128935356 + L1M4 LINE L1 3605 3938 -2208 829 283 40 17 chr10 16654189 16654489 -128934799 + L1MC4a LINE L1 6559 6865 -943 303 319 60 60 chr10 16654491 16654723 -128934565 + L1M4 LINE L1 11 242 -6300 603 331 121 35 chr10 16654888 16655655 -128933633 - L1 LINE L1 -1336 4810 3978 325 362 26 0 chr10 16655660 16655776 -128933512 + MIR SINE MIR 2 120 -142 304 208 10 21 chr10 16655826 16655922 -128933366 + (TA)n Simple_repeat Simple_repeat 1 95 0 553 203 77 8 chr10 16655924 16656170 -128933118 - L1 LINE L1 -2828 3318 3056 * 1192 259 134 18 chr10 16656162 16656708 -128932580 - L1M4 LINE L1 -2275 3871 3195 186 43 0 0 chr10 16656708 16656731 -128932557 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1192 259 134 18 chr10 16656731 16656920 -128932368 - L1M4 LINE L1 -2951 3195 3029 21 0 0 0 chr10 16657483 16657504 -128931784 + AT_rich Low_complexity Low_complexity 1 21 0 299 270 58 108 chr10 16659603 16659844 -128929444 - L2 LINE L2 -49 3223 2995 2538 55 0 10 chr10 16659872 16660184 -128929104 + AluY SINE Alu 1 309 -2 6319 89 12 0 chr10 16661036 16662117 -128927171 + L1PA8 LINE L1 5066 6158 -14 23 0 0 0 chr10 16662391 16662414 -128926874 + AT_rich Low_complexity Low_complexity 1 23 0 2112 119 7 10 chr10 16663662 16663964 -128925324 - AluSx SINE Alu -11 301 1 929 288 9 0 chr10 16664139 16664365 -128924923 - MIR SINE MIR -31 231 4 29 32 0 48 chr10 16664497 16664526 -128924762 + AT_rich Low_complexity Low_complexity 1 30 -29 1580 185 18 4 chr10 16664526 16664807 -128924481 + AluJo SINE Alu 1 285 -27 29 32 0 48 chr10 16664807 16664839 -128924449 + AT_rich Low_complexity Low_complexity 30 59 0 230 146 85 12 chr10 16666286 16666368 -128922920 + (TA)n Simple_repeat Simple_repeat 1 88 0 2244 111 0 0 chr10 16667688 16667986 -128921302 - AluSx SINE Alu -14 298 1 3080 221 54 40 chr10 16668334 16670077 -128919211 + L1ME1 LINE L1 4206 5963 -203 510 336 66 8 chr10 16671899 16672140 -128917148 - MIR SINE MIR -1 261 7 313 308 136 0 chr10 16672290 16672459 -128916829 - L2 LINE L2 -936 2378 2187 196 91 45 0 chr10 16674212 16674256 -128915032 + (TA)n Simple_repeat Simple_repeat 1 46 0 2366 90 0 0 chr10 16674335 16674636 -128914652 - AluSg SINE Alu -9 301 1 261 152 101 25 chr10 16675656 16675735 -128913553 + L1MEd LINE L1 70 154 -5965 2202 114 0 10 chr10 16675897 16676203 -128913085 - AluSg SINE Alu -7 303 1 259 349 28 9 chr10 16676520 16676629 -128912659 + L1MEd LINE L1 531 641 -5478 1097 134 27 5 chr10 16677098 16677285 -128912003 - L1PB3 LINE L1 -7 6147 5957 594 281 72 26 chr10 16677414 16677805 -128911483 + L1MEd LINE L1 700 1108 -5011 357 319 30 6 chr10 16678127 16678293 -128910995 + L1 LINE L1 3496 3665 -2481 474 244 48 39 chr10 16678419 16678696 -128910592 - LTR52 LTR ERVL -5 416 110 504 282 13 51 chr10 16678997 16679153 -128910135 - LTR33 LTR ERVL -306 215 66 398 249 216 0 chr10 16679183 16679364 -128909924 - L1MEd LINE L1 -4225 2315 2096 10839 92 6 13 chr10 16679720 16681203 -128908085 + HERVL-A1 LTR ERVL 4182 5654 0 3360 86 5 0 chr10 16681203 16681645 -128907643 + MLT2A1 LTR ERVL 1 444 0 425 206 11 11 chr10 16681650 16681742 -128907546 + L1M4c LINE L1 855 946 -5700 195 184 0 0 chr10 16681798 16681836 -128907452 + T-rich Low_complexity Low_complexity 1 38 0 2053 212 27 53 chr10 16681852 16682583 -128906705 + L1M4c LINE L1 836 1539 -5003 * 2377 287 72 85 chr10 16682576 16683769 -128905519 + L1 LINE L1 3700 4877 -1269 453 243 9 28 chr10 16686235 16686342 -128902946 - MER110 LTR ERV1 0 491 387 210 192 0 0 chr10 16686386 16686438 -128902850 + (TGGA)n Simple_repeat Simple_repeat 1 52 0 485 279 34 44 chr10 16686488 16686692 -128902596 - MER110 LTR ERV1 -102 389 188 3582 128 40 3 chr10 16688451 16689058 -128900230 + L1PB2 LINE L1 5523 6151 0 581 181 150 8 chr10 16689058 16689185 -128900103 - MLT1A1 LTR MaLR -220 145 1 4631 225 42 24 chr10 16689194 16690699 -128898589 + L1 LINE L1 3036 4611 -1535 467 273 12 55 chr10 16693955 16694120 -128895168 + L2 LINE L2 3156 3313 0 1649 176 44 7 chr10 16696084 16696379 -128892909 + AluSx SINE Alu 6 311 -1 189 107 0 0 chr10 16698094 16698122 -128891166 + (CA)n Simple_repeat Simple_repeat 2 29 0 1695 171 0 17 chr10 16698436 16698734 -128890554 - AluJb SINE Alu -19 293 1 24 32 0 0 chr10 16698872 16698903 -128890385 + AT_rich Low_complexity Low_complexity 1 31 0 270 281 51 34 chr10 16698915 16699207 -128890081 - L1MEd LINE L1 -4911 1619 1323 584 103 35 9 chr10 16699215 16699331 -128889957 + CT-rich Low_complexity Low_complexity 2 120 0 525 318 59 3 chr10 16699371 16699660 -128889628 - L1MEd LINE L1 -5297 1233 929 3974 208 23 9 chr10 16699815 16700875 -128888413 - L1MB7 LINE L1 -16 6168 5084 574 221 13 6 chr10 16700909 16701067 -128888221 - L1MEd LINE L1 -5957 573 415 2329 104 0 0 chr10 16701122 16701419 -128887869 - AluSg SINE Alu -13 297 1 453 333 83 15 chr10 16701435 16701641 -128887647 + MIR SINE MIR 34 251 -11 251 323 11 11 chr10 16701809 16701902 -128887386 - MIR SINE MIR -122 140 48 188 83 0 28 chr10 16702083 16702119 -128887169 + (TTAAA)n Simple_repeat Simple_repeat 1 35 0 547 209 0 31 chr10 16702119 16702248 -128887040 - MER3 DNA MER1_type -78 131 7 924 71 8 0 chr10 16703155 16703282 -128886006 - THE1C LTR MaLR 0 375 248 919 81 0 0 chr10 16703333 16703456 -128885832 - THE1C LTR MaLR 0 375 253 3648 120 31 21 chr10 16703689 16704039 -128885249 - L1PA16 LINE L1 -16 6150 5790 2338 139 25 3 chr10 16704039 16704406 -128884882 - THE1C LTR MaLR 0 375 1 3648 120 31 21 chr10 16704406 16704670 -128884618 - L1PA16 LINE L1 -376 5790 5530 1548 129 4 0 chr10 16704676 16704917 -128884371 + LOR1a LTR ERV1 256 497 0 428 214 10 0 chr10 16704919 16705017 -128884271 + L1MC2 LINE L1 6246 6344 0 244 395 18 17 chr10 16706074 16706298 -128882990 + MIR SINE MIR 7 226 -36 1277 199 60 9 chr10 16706375 16706692 -128882596 + L1MC2 LINE L1 5987 6319 -25 470 299 9 23 chr10 16707086 16707307 -128881981 + Charlie2a DNA MER1_type 571 788 -2074 943 122 27 4 chr10 16707309 16707497 -128881791 + AluSx SINE Alu 35 301 -11 474 293 46 26 chr10 16707513 16707858 -128881430 + Charlie2a DNA MER1_type 790 1141 -1721 7373 168 7 21 chr10 16707866 16709372 -128879916 + L1P LINE L1 3680 5164 -982 722 128 0 0 chr10 16709372 16709474 -128879814 + AluSq/x SINE Alu 26 127 -185 27 62 0 0 chr10 16709580 16709628 -128879660 + AT_rich Low_complexity Low_complexity 1 48 0 207 195 0 0 chr10 16709673 16709714 -128879574 + (AATTG)n Simple_repeat Simple_repeat 4 44 0 542 176 88 14 chr10 16709716 16709864 -128879424 + Charlie2a DNA MER1_type 1488 1646 -1216 227 149 0 21 chr10 16709889 16709936 -128879352 + (GGAGA)n Simple_repeat Simple_repeat 4 49 0 2222 112 13 0 chr10 16709957 16710261 -128879027 + AluSp SINE Alu 1 308 -5 2250 108 0 3 chr10 16710314 16710609 -128878679 + AluSg1 SINE Alu 1 294 -15 1819 211 110 24 chr10 16710613 16711334 -128877954 + Charlie2a DNA MER1_type 1652 2434 -428 3504 73 0 0 chr10 16711447 16711914 -128877374 - Harlequin LTR ERV1 -5730 2896 2430 * 3672 68 0 0 chr10 16711899 16712371 -128876917 - Harlequin LTR ERV1 -6612 2014 1543 3416 99 23 5 chr10 16712390 16712743 -128876545 - Harlequin LTR ERV1 -5087 1809 1464 315 0 0 0 chr10 16712743 16712778 -128876510 + (TG)n Simple_repeat Simple_repeat 2 36 0 3416 99 23 5 chr10 16712778 16713175 -128876113 - Harlequin LTR ERV1 -5432 1464 1001 1758 98 167 164 chr10 16713183 16713921 -128875367 + LTR12 LTR ERV1 57 560 -154 1947 169 156 30 chr10 16714782 16715307 -128873981 - LTR49 LTR ERV1 -4 591 1 793 160 12 59 chr10 16715674 16715808 -128873480 - MER4E LTR ERV1 -7 772 646 3138 124 28 57 chr10 16715808 16716371 -128872917 + LTR10B LTR ERV1 1 547 0 793 160 12 59 chr10 16716371 16716405 -128872883 - MER4E LTR ERV1 -133 646 612 666 165 0 0 chr10 16716405 16716508 -128872780 - AluSq/x SINE Alu -210 103 1 338 165 8 75 chr10 16717036 16717163 -128872125 - MER41A LTR ERV1 -9 516 393 1644 112 0 9 chr10 16717164 16717294 -128871994 + AluSq SINE Alu 1 130 -183 227 31 31 0 chr10 16717294 16717326 -128871962 + (TA)n Simple_repeat Simple_repeat 2 34 0 1644 112 0 9 chr10 16717326 16717419 -128871869 + AluSq SINE Alu 130 222 -91 3960 52 12 0 chr10 16717419 16717903 -128871385 + LTR2B LTR ERV1 1 490 0 520 139 0 0 chr10 16717903 16717975 -128871313 + AluSq SINE Alu 219 290 -23 22 0 0 0 chr10 16717975 16717997 -128871291 + AT_rich Low_complexity Low_complexity 1 22 0 622 200 73 33 chr10 16717997 16718172 -128871116 + FAM SINE Alu 1 45 0 1962 192 2 35 chr10 16718179 16718607 -128870681 - MER41B LTR ERV1 -108 527 114 21 0 0 0 chr10 16718625 16718646 -128870642 + AT_rich Low_complexity Low_complexity 1 21 0 268 270 16 0 chr10 16719037 16719100 -128870188 + L2 LINE L2 3186 3249 -23 2372 102 10 0 chr10 16719230 16719535 -128869753 + AluSc SINE Alu 1 308 -1 226 83 0 62 chr10 16720519 16720567 -128868721 + (CATATA)n Simple_repeat Simple_repeat 3 47 0 28 61 0 0 chr10 16720669 16720718 -128868570 + AT_rich Low_complexity Low_complexity 1 49 0 13848 152 34 17 chr10 16720837 16724326 -128864962 - L1MA2 LINE L1 -4 7719 4123 1594 221 14 0 chr10 16724326 16724615 -128864673 + AluJb SINE Alu 1 293 -19 13848 152 34 17 chr10 16724615 16725752 -128863536 - L1MA2 LINE L1 -3600 4123 3007 5007 127 34 42 chr10 16725779 16726850 -128862438 - L1PB1 LINE L1 -2 6149 5090 * 13107 158 138 4 chr10 16726837 16726850 -128862438 - L1MA2 LINE L1 -4532 3033 3023 835 85 0 0 chr10 16726850 16726956 -128862332 - U6 snRNA snRNA 0 107 2 13107 158 138 4 chr10 16726956 16729598 -128859690 - L1MA2 LINE L1 -4542 3023 23 2039 154 3 0 chr10 16729787 16730098 -128859190 + AluSx SINE Alu 1 312 0 370 204 61 0 chr10 16730398 16730496 -128858792 - MER97c DNA MER1_type? -913 177 74 1582 204 0 7 chr10 16730891 16731175 -128858113 + AluJb SINE Alu 1 282 -30 263 313 125 32 chr10 16731667 16731948 -128857340 + MLT1J LTR MaLR 124 430 -81 569 211 58 53 chr10 16732190 16732398 -128856890 - MER3 DNA MER1_type 0 209 1 323 311 72 5 chr10 16732418 16732611 -128856677 - L1ME LINE L1 -516 5637 5432 496 308 46 23 chr10 16732714 16733153 -128856135 - L1ME LINE L1 -1095 5034 4586 983 201 75 61 chr10 16733199 16733622 -128855666 + MLT1D LTR MaLR 44 505 0 3922 240 20 54 chr10 16733623 16734856 -128854432 + MLT1D-int LTR MaLR 2 1192 -179 226 229 0 0 chr10 16734854 16734902 -128854386 - MLT1-int LTR MaLR -668 703 656 * 269 152 0 0 chr10 16734909 16734955 -128854333 + MLT1D-int LTR MaLR 1187 1232 -139 2183 121 7 0 chr10 16734956 16735253 -128854035 - AluSx SINE Alu -9 303 5 11781 45 7 0 chr10 16735310 16737545 -128851743 - L1PA5 LINE L1 -13 6141 3899 9740 44 1 2 chr10 16737546 16738836 -128850452 + L1PA5 LINE L1 2594 3881 -2265 435 219 41 0 chr10 16738855 16738978 -128850310 + MLT1D-int LTR MaLR 1237 1364 -7 1040 246 111 35 chr10 16738985 16739437 -128849851 + MLT1D LTR MaLR 1 486 -19 647 319 129 18 chr10 16739457 16740021 -128849267 - L1ME LINE L1 -1549 4580 3954 337 258 47 30 chr10 16740121 16740377 -128848911 - L1MEc LINE L1 -4865 1290 993 315 281 9 83 chr10 16740473 16740632 -128848656 - L1M4 LINE L1 -2913 3233 3094 2239 102 10 19 chr10 16740632 16740946 -128848342 - AluY SINE Alu 0 311 1 315 281 9 83 chr10 16740946 16741014 -128848274 - L1M4 LINE L1 -3052 3094 3023 23 33 0 0 chr10 16741116 16741146 -128848142 + AT_rich Low_complexity Low_complexity 1 30 0 2579 126 30 0 chr10 16741190 16741595 -128847693 - L1PA10 LINE L1 -18 6150 5734 4284 78 23 11 chr10 16741595 16742610 -128846678 - MER11A LTR ERVK -1 1265 1 2454 107 77 5 chr10 16742610 16743314 -128845974 - L1PA10 LINE L1 -391 5740 4879 1609 223 0 3 chr10 16743930 16744231 -128845057 - AluJo SINE Alu -12 300 1 252 330 96 59 chr10 16744370 16744933 -128844355 - L1MEc LINE L1 -5487 632 49 2268 113 0 0 chr10 16744976 16745277 -128844011 - AluSx SINE Alu -11 301 1 226 270 68 27 chr10 16745302 16745450 -128843838 - L1MC/D LINE L1 -1894 5914 5761 3754 148 19 28 chr10 16745734 16745830 -128843458 - L1MA7 LINE L1 -9 6282 6187 2114 117 0 37 chr10 16745830 16746154 -128843134 + AluSq SINE Alu 1 312 -1 3754 148 19 28 chr10 16746154 16746422 -128842866 - L1MA7 LINE L1 -104 6187 5918 2157 177 78 0 chr10 16746422 16746817 -128842471 + MSTB LTR MaLR 1 426 0 3754 148 19 28 chr10 16746817 16747172 -128842116 - L1MA7 LINE L1 -373 5918 5568 403 285 119 55 chr10 16747189 16747327 -128841961 - L1MC/D LINE L1 -369 5752 5624 1760 97 0 0 chr10 16747327 16747554 -128841734 + AluSg/x SINE Alu 84 310 -2 403 285 119 55 chr10 16747554 16747836 -128841452 - L1MC/D LINE L1 -497 5624 5305 2100 120 10 3 chr10 16748501 16748801 -128840487 - AluSc SINE Alu -7 302 1 355 301 81 40 chr10 16749126 16749299 -128839989 - MER5A DNA MER1_type -3 186 7 529 253 26 52 chr10 16749329 16749523 -128839765 + MER5A DNA MER1_type 1 189 0 306 375 44 7 chr10 16749530 16749666 -128839622 + MIR3 SINE MIR 37 177 -31 2468 80 0 0 chr10 16749823 16750122 -128839166 - AluSg SINE Alu -11 299 1 403 323 117 9 chr10 16752910 16753133 -128836155 + MIR SINE MIR 2 248 -14 367 191 227 9 chr10 16753715 16753825 -128835463 - L2 LINE L2 -2 3311 3178 383 308 42 28 chr10 16754032 16754246 -128835042 + HERV16 LTR ERVL 3472 3688 -1308 633 351 40 23 chr10 16754460 16754666 -128834622 + HERV16 LTR ERVL 4482 4683 -971 1823 146 40 45 chr10 16754666 16755043 -128834245 - THE1C LTR MaLR 0 375 1 633 351 40 23 chr10 16755043 16755358 -128833930 + HERV16 LTR ERVL 4683 5012 -642 308 256 84 23 chr10 16755392 16755569 -128833719 + L1M4 LINE L1 2331 2564 -3902 2852 233 58 57 chr10 16756146 16757630 -128831658 + L1M4 LINE L1 4066 5550 -832 2541 269 54 20 chr10 16757649 16758558 -128830730 + L1MEc LINE L1 37 976 -5420 374 289 103 0 chr10 16758562 16758718 -128830570 + L1M4c LINE L1 3518 3689 -2693 246 244 118 14 chr10 16758739 16758861 -128830427 + MIR SINE MIR 24 226 -36 1608 133 29 65 chr10 16758863 16758975 -128830313 + AluJb SINE Alu 1 115 -197 2050 125 47 33 chr10 16758975 16759334 -128829954 + THE1B LTR MaLR 1 364 0 1608 133 29 65 chr10 16759334 16759554 -128829734 + AluJb SINE Alu 115 312 0 21 71 0 0 chr10 16759808 16759850 -128829438 + AT_rich Low_complexity Low_complexity 1 42 0 733 287 75 35 chr10 16760050 16760566 -128828722 + HAL1b LINE L1 282 743 -605 23 0 0 0 chr10 16760615 16760638 -128828650 + AT_rich Low_complexity Low_complexity 1 23 0 299 146 0 0 chr10 16760839 16760887 -128828401 - MLT2B1 LTR ERVL 0 397 350 2222 95 0 17 chr10 16760918 16761214 -128828074 + AluY SINE Alu 1 291 -20 191 36 36 0 chr10 16761214 16761242 -128828046 + (TA)n Simple_repeat Simple_repeat 2 30 0 848 272 110 35 chr10 16761261 16761714 -128827574 - MLT2B1 LTR ERVL -20 462 1 1596 285 41 10 chr10 16761714 16762230 -128827058 + L1ME2 LINE L1 28 559 -5486 2057 132 44 22 chr10 16762282 16762627 -128826661 + MLT1B LTR MaLR 18 373 -17 1320 224 128 14 chr10 16762627 16762980 -128826308 - MSTD LTR MaLR 0 396 4 2057 132 44 22 chr10 16762980 16762998 -128826290 + MLT1B LTR MaLR 373 389 -1 228 111 0 0 chr10 16763005 16763041 -128826247 + (CAA)n Simple_repeat Simple_repeat 1 36 0 2026 239 138 26 chr10 16763046 16763455 -128825833 + L1ME2 LINE L1 577 939 -5625 2024 119 20 3 chr10 16763455 16763749 -128825539 + AluSx SINE Alu 11 309 -3 2026 239 138 26 chr10 16763749 16765199 -128824089 + L1ME2 LINE L1 939 2225 -4339 1797 130 105 0 chr10 16765199 16765475 -128823813 - AluSq SINE Alu -8 305 1 2026 239 138 26 chr10 16765475 16766440 -128822848 + L1ME2 LINE L1 2225 3860 -2704 * 5103 172 33 18 chr10 16766437 16768469 -128820819 + L1PA16 LINE L1 4103 6161 -5 4024 223 36 50 chr10 16768545 16768721 -128820567 + L1ME2 LINE L1 3938 4115 -2449 1822 134 43 33 chr10 16768721 16769020 -128820268 + AluJo SINE Alu 1 302 -10 4865 171 20 39 chr10 16769020 16770006 -128819282 + LTR5 LTR ERVK 2 969 0 4024 223 36 50 chr10 16770006 16770504 -128818784 + L1ME2 LINE L1 4114 4617 -1947 612 254 0 0 chr10 16770504 16770634 -128818654 + FLAM_A SINE Alu 1 130 -3 4024 223 36 50 chr10 16770634 16771355 -128817933 + L1ME2 LINE L1 4617 5316 -1248 1129 240 62 22 chr10 16771351 16771709 -128817579 + L1ME2 LINE L1 6119 6490 -92 * 1180 226 0 0 chr10 16771709 16771975 -128817313 + L1PA15 LINE L1 4124 4389 -1757 294 196 0 0 chr10 16771974 16772030 -128817258 + L1PA16 LINE L1 6031 6086 -80 * 4985 139 15 24 chr10 16772038 16772976 -128816312 + L1PA15 LINE L1 4397 5323 -842 2389 57 0 0 chr10 16772976 16773280 -128816008 + AluY SINE Alu 1 304 0 4985 139 15 24 chr10 16773280 16774115 -128815173 + L1PA15 LINE L1 5323 6164 -1 491 167 0 0 chr10 16774120 16774204 -128815084 + L1ME2 LINE L1 6486 6569 -13 317 304 140 27 chr10 16774376 16774606 -128814682 - MIR SINE MIR -3 259 7 2199 112 0 10 chr10 16774956 16775269 -128814019 + AluSg SINE Alu 1 310 0 1438 218 0 24 chr10 16776494 16776788 -128812500 + AluJo SINE Alu 3 289 -23 312 106 0 0 chr10 16776797 16776844 -128812444 - Charlie5 DNA MER1_type -2521 91 45 206 288 0 0 chr10 16777143 16777202 -128812086 + CT-rich Low_complexity Low_complexity 2 60 0 195 69 0 0 chr10 16778419 16778448 -128810840 + (TTTG)n Simple_repeat Simple_repeat 1 29 0 646 115 10 0 chr10 16778448 16778544 -128810744 - AluJ SINE Alu -33 279 183 762 162 0 0 chr10 16778560 16778677 -128810611 - AluJ SINE Alu -191 121 5 345 323 64 86 chr10 16778806 16779317 -128809971 + L2 LINE L2 2727 3221 -51 378 189 28 0 chr10 16779375 16779481 -128809807 + GA-rich Low_complexity Low_complexity 4 112 0 203 233 0 23 chr10 16779582 16779625 -128809663 + polypurine Low_complexity Low_complexity 4 45 0 820 169 3 20 chr10 16779625 16779972 -128809316 + GA-rich Low_complexity Low_complexity 1 340 0 29 0 0 0 chr10 16780966 16780995 -128808293 + AT_rich Low_complexity Low_complexity 1 29 0 216 0 0 0 chr10 16781618 16781642 -128807646 + (TA)n Simple_repeat Simple_repeat 2 25 0 658 287 39 4 chr10 16782269 16782527 -128806761 - MER102a DNA MER1_type -10 320 54 186 300 140 20 chr10 16782598 16782698 -128806590 - MIR3 SINE MIR -46 162 51 517 296 75 40 chr10 16782722 16782921 -128806367 + MIR SINE MIR 44 249 -13 3540 132 3 19 chr10 16783050 16783305 -128805983 + L1PA13 LINE L1 5578 5835 -328 2265 110 0 0 chr10 16783305 16783597 -128805691 + AluSg SINE Alu 1 292 -18 3540 132 3 19 chr10 16783597 16783932 -128805356 + L1PA13 LINE L1 5835 6159 -4 21 0 0 0 chr10 16783972 16783993 -128805295 + AT_rich Low_complexity Low_complexity 1 21 0 195 42 0 0 chr10 16784385 16784409 -128804879 + (A)n Simple_repeat Simple_repeat 1 24 0 446 194 130 28 chr10 16785951 16786059 -128803229 + FLAM_C SINE Alu 5 123 -20 420 148 139 30 chr10 16786069 16786170 -128803118 + FLAM_C SINE Alu 16 127 -16 1701 247 67 15 chr10 16786377 16786638 -128802650 - MLT1D LTR MaLR 0 505 259 1939 157 7 7 chr10 16786638 16786944 -128802344 - AluSx SINE Alu -6 306 1 1701 247 67 15 chr10 16786944 16787160 -128802128 - MLT1D LTR MaLR -246 259 3 3121 117 32 2 chr10 16787566 16788061 -128801227 - L1PA16 LINE L1 -11 6155 5646 1280 210 118 13 chr10 16788062 16788570 -128800718 - L1M4 LINE L1 -734 5440 4892 1840 160 0 3 chr10 16788572 16788854 -128800434 + AluSx SINE Alu 2 282 -30 354 324 88 12 chr10 16789312 16789482 -128799806 - MIR SINE MIR -72 190 8 207 226 130 61 chr10 16792036 16792151 -128797137 - L2 LINE L2 -1 3312 3190 746 261 32 110 chr10 16792366 16792619 -128796669 - L2 LINE L2 -9 3304 3088 2039 129 0 11 chr10 16792619 16792906 -128796382 + AluSx SINE Alu 1 284 -28 746 261 32 110 chr10 16792906 16793024 -128796264 - L2 LINE L2 -225 3088 2962 21 0 0 0 chr10 16793092 16793113 -128796175 + AT_rich Low_complexity Low_complexity 1 21 0 31 26 0 0 chr10 16793168 16793206 -128796082 + AT_rich Low_complexity Low_complexity 1 38 0 320 366 113 17 chr10 16794054 16794337 -128794951 - L2 LINE L2 -261 3011 2690 1566 227 47 20 chr10 16794733 16795183 -128794105 - LTR40b LTR ERVL 0 462 1 252 309 53 0 chr10 16795187 16795281 -128794007 + MIR SINE MIR 77 175 -87 283 313 30 20 chr10 16795484 16795685 -128793603 + LTR37B LTR ERV1 248 450 -18 211 321 107 0 chr10 16795676 16795760 -128793528 + MIR SINE MIR 167 259 -3 * 1900 154 90 29 chr10 16796199 16796542 -128792746 - THE1B LTR MaLR 0 364 1 573 278 73 19 chr10 16798070 16798275 -128791013 + MIR SINE MIR 17 232 -30 1887 171 0 3 chr10 16798323 16798633 -128790655 + AluJo SINE Alu 1 309 -3 31 26 0 0 chr10 16798678 16798716 -128790572 + AT_rich Low_complexity Low_complexity 1 38 0 1580 170 10 20 chr10 16800706 16801000 -128788288 + AluJo SINE Alu 9 299 -13 245 286 41 129 chr10 16801383 16801441 -128787847 + L2 LINE L2 3137 3199 -73 2103 137 3 10 chr10 16801441 16801755 -128787533 + AluSx SINE Alu 1 312 0 245 286 41 129 chr10 16801755 16801843 -128787445 + L2 LINE L2 3199 3270 -2 2668 111 19 5 chr10 16801885 16802255 -128787033 + THE1C LTR MaLR 1 375 0 1630 162 25 14 chr10 16802405 16802689 -128786599 + AluJo SINE Alu 1 287 -25 183 296 96 48 chr10 16802737 16802862 -128786426 - MIR3 SINE MIR -65 143 13 1852 179 0 0 chr10 16804243 16804555 -128784733 - AluJb SINE Alu 0 312 1 4431 195 48 6 chr10 16805027 16805084 -128784204 + L1MB8 LINE L1 4959 5012 -1166 2375 129 33 33 chr10 16805084 16805448 -128783840 - THE1B LTR MaLR 0 364 1 4431 195 48 6 chr10 16805448 16806564 -128782724 + L1MB8 LINE L1 5012 6178 0 262 301 50 96 chr10 16806566 16806868 -128782420 - L2 LINE L2 -1317 1997 1710 651 200 0 0 chr10 16806904 16807009 -128782279 + FLAM_C SINE Alu 2 106 -37 186 368 47 47 chr10 16807047 16807218 -128782070 - L2 LINE L2 -2010 1304 1134 772 165 0 24 chr10 16807384 16807511 -128781777 - FLAM_C SINE Alu -6 137 14 260 346 108 42 chr10 16807549 16807910 -128781378 - L2 LINE L2 -2375 939 555 355 353 16 8 chr10 16808474 16808596 -128780692 + L2 LINE L2 3191 3313 0 310 266 53 18 chr10 16808933 16809046 -128780242 + MER103 DNA DNA 5 121 -45 2069 136 0 7 chr10 16809091 16809393 -128779895 - AluSx SINE Alu -12 300 1 630 267 0 0 chr10 16810532 16810663 -128778625 - FLAM_A SINE Alu 0 133 3 400 250 54 9 chr10 16810667 16810779 -128778509 + L2 LINE L2 3196 3312 -1 441 237 108 22 chr10 16810834 16810973 -128778315 - MIR SINE MIR -92 170 20 570 220 55 3 chr10 16810978 16811393 -128777895 - MER20B DNA MER1_type -8 775 285 787 150 0 17 chr10 16811423 16811543 -128777745 - FLAM_C SINE Alu -15 118 1 1698 166 32 21 chr10 16811723 16812155 -128777133 - L1MA4A LINE L1 -23 6280 5783 209 238 0 0 chr10 16812156 16812198 -128777090 + (TA)n Simple_repeat Simple_repeat 1 42 0 307 315 0 0 chr10 16812199 16812288 -128777000 - L1MC4 LINE L1 -1339 6703 6615 213 39 0 0 chr10 16812288 16812314 -128776974 + (CA)n Simple_repeat Simple_repeat 1 26 0 1426 134 84 8 chr10 16812314 16812575 -128776713 - L1M1 LINE L1 -514 5789 5509 323 155 0 17 chr10 16813408 16813466 -128775822 + MIR3 SINE MIR 149 205 -3 1864 161 3 20 chr10 16813751 16813886 -128775402 + AluJb SINE Alu 1 137 -175 2101 90 43 0 chr10 16813886 16814164 -128775124 + AluSc SINE Alu 1 290 -19 651 26 0 0 chr10 16814165 16814242 -128775046 + (TA)n Simple_repeat Simple_repeat 1 77 0 1864 161 3 20 chr10 16814242 16814403 -128774885 + AluJb SINE Alu 136 294 -18 738 170 0 0 chr10 16816044 16816150 -128773138 + FLAM_C SINE Alu 13 118 -25 823 193 23 12 chr10 16816160 16816546 -128772742 + GA-rich Low_complexity Low_complexity 1 390 0 2030 156 38 38 chr10 16817399 16817772 -128771516 - THE1C LTR MaLR 0 375 3 792 196 0 0 chr10 16817800 16817933 -128771355 + AluJo SINE Alu 3 135 -177 244 259 165 0 chr10 16818937 16819022 -128770266 - L1ME LINE L1 -530 5640 5542 7006 126 60 37 chr10 16819042 16820160 -128769128 - Tigger3b DNA MER2_type -1797 1231 82 2194 110 10 3 chr10 16820160 16820461 -128768827 - AluSq SINE Alu -10 303 1 7006 126 60 37 chr10 16820461 16820545 -128768743 - Tigger3b DNA MER2_type -2946 82 1 224 250 12 12 chr10 16820808 16820892 -128768396 + (TA)n Simple_repeat Simple_repeat 1 84 0 2449 78 10 0 chr10 16821351 16821658 -128767630 + AluY SINE Alu 1 310 -1 2073 139 10 0 chr10 16821691 16822000 -128767288 + AluSx SINE Alu 1 312 0 205 300 108 17 chr10 16822355 16822475 -128766813 - L2 LINE L2 -799 2515 2385 2002 108 66 10 chr10 16823248 16823536 -128765752 + AluSq SINE Alu 1 304 -9 1740 139 15 0 chr10 16824070 16824336 -128764952 + Tigger5 DNA MER2_type 2052 2321 -2 7132 78 23 0 chr10 16825396 16826489 -128762799 - L1PA7 LINE L1 -7 6147 5049 4773 87 0 0 chr10 16826489 16827133 -128762155 + L1PA7 LINE L1 4419 5062 -1084 1786 177 0 16 chr10 16827386 16827696 -128761592 + AluJb SINE Alu 1 305 -7 454 196 20 10 chr10 16828196 16828298 -128760990 - L1MC4 LINE L1 -18 8024 7922 2308 119 0 0 chr10 16828417 16828720 -128760568 + AluSx SINE Alu 1 303 -9 216 0 0 0 chr10 16829041 16829065 -128760223 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 314 307 88 76 chr10 16829065 16829475 -128759813 - L2 LINE L2 -13 3300 2886 1548 218 40 25 chr10 16829496 16830079 -128759209 + L1MEc LINE L1 2058 2606 -3609 579 158 219 0 chr10 16830097 16830211 -128759077 - FLAM_C SINE Alu -4 139 1 697 231 17 0 chr10 16830224 16830397 -128758891 + L1MEc LINE L1 2614 2789 -3426 2346 189 42 0 chr10 16830746 16831154 -128758134 - MSTB1 LTR MaLR 0 432 8 474 187 24 65 chr10 16831292 16831367 -128757921 + MER53 DNA DNA 1 71 -118 1778 107 9 0 chr10 16831367 16831600 -128757688 - AluSx SINE Alu -22 290 56 474 187 24 65 chr10 16831600 16831647 -128757641 + MER53 DNA DNA 71 118 -71 180 393 0 12 chr10 16831801 16831885 -128757403 - L3 LINE CR1 -44 1533 1451 539 364 22 29 chr10 16832569 16832885 -128756403 - L3b LINE CR1 -125 1458 1145 226 211 0 0 chr10 16833727 16833779 -128755509 + L1MC4 LINE L1 6652 6703 -1339 2371 68 0 10 chr10 16833792 16834084 -128755204 - AluY SINE Alu -22 289 1 1725 163 0 30 chr10 16834089 16834389 -128754899 - AluJo SINE Alu -21 291 1 2178 221 29 5 chr10 16834646 16835089 -128754199 + MER82 DNA MER2_type 200 653 0 233 221 147 0 chr10 16835089 16835157 -128754131 - MIR SINE MIR -111 151 74 2097 99 0 38 chr10 16835231 16835523 -128753765 + AluSg SINE Alu 14 294 -16 226 239 113 0 chr10 16835825 16835896 -128753392 + MIR SINE MIR 120 198 -64 1766 157 29 0 chr10 16836640 16836921 -128752367 + AluSx SINE Alu 3 291 -21 232 304 152 19 chr10 16836978 16837093 -128752195 + MIR SINE MIR 10 153 -109 1731 163 3 52 chr10 16837093 16837418 -128751870 + AluJo SINE Alu 1 309 -3 232 304 152 19 chr10 16837418 16837460 -128751828 + MIR SINE MIR 153 188 -74 289 207 69 0 chr10 16837581 16837639 -128751649 - L2 LINE L2 -2 3270 3209 189 0 0 0 chr10 16837663 16837684 -128751604 + (TG)n Simple_repeat Simple_repeat 2 22 0 784 189 0 0 chr10 16837932 16838054 -128751234 + FLAM_C SINE Alu 3 124 -19 208 253 58 69 chr10 16838638 16838725 -128750563 - L3b LINE CR1 -69 1514 1429 192 77 0 0 chr10 16839700 16839726 -128749562 + (TTA)n Simple_repeat Simple_repeat 2 27 0 876 129 0 0 chr10 16839732 16839848 -128749440 - FLAM_C SINE Alu -27 116 1 2169 122 16 0 chr10 16840087 16840435 -128748853 + AluSx SINE Alu 1 353 0 2032 178 53 61 chr10 16840642 16840822 -128748466 + MLT1D LTR MaLR 3 183 -322 2080 132 58 37 chr10 16840822 16841170 -128748118 + THE1A LTR MaLR 1 355 0 2032 178 53 61 chr10 16841170 16841395 -128747893 + MLT1D LTR MaLR 183 406 -99 1630 172 13 36 chr10 16841395 16841703 -128747585 - AluJo SINE Alu -11 301 1 2032 178 53 61 chr10 16841703 16841803 -128747485 + MLT1D LTR MaLR 406 505 0 1289 264 43 26 chr10 16842137 16842554 -128746734 - LTR33 LTR ERVL -84 437 14 491 111 0 14 chr10 16842827 16842899 -128746389 - THE1B LTR MaLR -2 362 292 2172 115 6 16 chr10 16842899 16843304 -128745984 + AluSg SINE Alu 1 402 0 2005 114 44 13 chr10 16843304 16843602 -128745686 - THE1B LTR MaLR -57 307 1 586 317 30 54 chr10 16844753 16844777 -128744511 + MLT1I LTR MaLR 5 28 -381 2013 129 10 7 chr10 16844777 16845071 -128744217 - AluSx SINE Alu -17 295 1 586 317 30 54 chr10 16845071 16845377 -128743911 + MLT1I LTR MaLR 28 327 -82 206 364 48 61 chr10 16845638 16845710 -128743578 + MIR SINE MIR 1 72 -190 1818 165 13 7 chr10 16845710 16846013 -128743275 + AluJo SINE Alu 1 305 -7 206 364 48 61 chr10 16846013 16846168 -128743120 + MIR SINE MIR 72 225 -37 464 157 11 45 chr10 16846351 16846440 -128742848 + MER58B DNA MER1_type 255 340 -1 318 353 39 13 chr10 16846712 16846865 -128742423 - L2 LINE L2 -4 3268 3112 285 396 28 39 chr10 16847498 16847645 -128741643 - L2 LINE L2 -362 2952 2805 2303 178 33 21 chr10 16847645 16848072 -128741216 - MSTB1 LTR MaLR 0 432 1 285 396 28 39 chr10 16848072 16848285 -128741003 - L2 LINE L2 -509 2805 2596 1420 196 6 92 chr10 16848291 16848617 -128740671 + AluJo SINE Alu 2 299 -3 247 224 10 20 chr10 16848637 16848735 -128740553 + GA-rich Low_complexity Low_complexity 1 97 0 287 259 142 14 chr10 16848835 16849056 -128740232 - MER5C DNA MER1_type -1 323 2 244 275 108 33 chr10 16849058 16849178 -128740110 - L2 LINE L2 -847 2467 2339 2177 202 77 0 chr10 16849736 16850137 -128739151 + MSTB1 LTR MaLR 1 432 0 1319 269 126 44 chr10 16850529 16851119 -128738169 - L2 LINE L2 -11 3302 2625 1623 188 0 14 chr10 16851119 16851412 -128737876 - AluJo SINE Alu -23 289 1 1319 269 126 44 chr10 16851412 16851702 -128737586 - L2 LINE L2 -688 2625 2360 207 278 37 0 chr10 16851731 16851785 -128737503 + L2 LINE L2 3228 3283 -30 1456 158 4 51 chr10 16851801 16852055 -128737233 + AluJo SINE Alu 43 284 -28 1696 178 3 17 chr10 16852632 16852924 -128736364 + AluJo SINE Alu 1 288 -24 1953 148 13 10 chr10 16854030 16854335 -128734953 + AluSx SINE Alu 1 306 -6 432 243 181 11 chr10 16854619 16854796 -128734492 - L2 LINE L2 -2 3311 3105 3348 187 43 88 chr10 16854817 16854961 -128734327 - L1 LINE L1 -2108 4038 3889 2180 66 52 7 chr10 16854961 16855248 -128734040 + AluY SINE Alu 1 300 -11 3348 187 43 88 chr10 16855248 16855810 -128733478 - L1 LINE L1 -2257 3889 3391 1671 160 34 20 chr10 16855810 16856103 -128733185 - AluJo SINE Alu -13 299 3 3348 187 43 88 chr10 16856103 16856425 -128732863 - L1 LINE L1 -2755 3391 3056 * 4621 153 109 68 chr10 16856423 16857534 -128731754 + L1MA9 LINE L1 4552 5616 -696 1377 184 59 26 chr10 16857534 16857832 -128731456 + AluJb SINE Alu 1 307 0 4621 153 109 68 chr10 16857832 16858058 -128731230 + L1MA9 LINE L1 5616 5831 -481 2281 117 3 0 chr10 16858058 16858366 -128730922 - AluSx SINE Alu -3 309 1 4621 153 109 68 chr10 16858366 16858691 -128730597 + L1MA9 LINE L1 5831 6273 -39 666 286 47 54 chr10 16858698 16859142 -128730146 - L1ME4a LINE L1 -47 6074 5634 278 299 9 37 chr10 16859167 16859274 -128730014 + MIR SINE MIR 20 123 -139 26 0 0 0 chr10 16859338 16859364 -128729924 + AT_rich Low_complexity Low_complexity 1 26 0 2306 133 25 33 chr10 16860250 16860617 -128728671 - THE1B LTR MaLR 0 364 1 281 301 141 64 chr10 16860848 16861004 -128728284 + L2 LINE L2 3105 3272 0 1778 181 3 3 chr10 16861094 16861397 -128727891 + AluJo SINE Alu 1 303 -9 2851 16 0 0 chr10 16862330 16862641 -128726647 - AluYa5 SINE Alu 0 311 1 1592 173 14 7 chr10 16862907 16863191 -128726097 - AluJo SINE Alu 0 312 27 2149 114 30 0 chr10 16863457 16863756 -128725532 - AluSq SINE Alu -5 308 1 267 314 115 26 chr10 16863816 16863972 -128725316 + MIR SINE MIR 29 198 -64 1631 193 3 10 chr10 16864206 16864501 -128724787 - AluJo SINE Alu -19 293 1 847 158 16 0 chr10 16864761 16864888 -128724400 - FLAM_C SINE Alu -4 129 1 519 250 67 0 chr10 16866120 16866300 -128722988 + L1ME LINE L1 4458 4649 -1497 * 878 229 80 53 chr10 16866296 16866470 -128722818 + L1ME LINE L1 5424 5592 -578 1642 197 71 71 chr10 16866470 16866936 -128722352 + MLT1C LTR MaLR 2 467 0 878 229 80 53 chr10 16866936 16866978 -128722310 + L1ME LINE L1 5592 5631 -539 2478 126 31 14 chr10 16866978 16867336 -128721952 + THE1B LTR MaLR 1 364 0 878 229 80 53 chr10 16867336 16867493 -128721795 + L1ME LINE L1 5631 5808 -362 198 167 0 0 chr10 16867499 16867529 -128721759 - MIR SINE MIR -24 238 209 * 623 296 72 66 chr10 16867527 16867708 -128721580 - L2 LINE L2 -99 3214 3036 1942 168 30 64 chr10 16867708 16868112 -128721176 + MLT1B LTR MaLR 1 390 0 623 296 72 66 chr10 16868112 16868418 -128720870 - L2 LINE L2 -277 3036 2722 2424 106 0 0 chr10 16868588 16868900 -128720388 + AluSx SINE Alu 1 312 0 1410 221 111 22 chr10 16869326 16869697 -128719591 + L1MC4 LINE L1 6476 6879 -1163 1896 176 0 0 chr10 16869697 16870009 -128719279 + AluJb SINE Alu 1 312 0 329 287 0 0 chr10 16870111 16870212 -128719076 + AluJb SINE Alu 202 302 0 653 202 84 22 chr10 16870255 16870433 -128718855 + L1MC4 LINE L1 6880 7068 -974 2114 114 0 4 chr10 16870648 16870929 -128718359 - AluSg SINE Alu -30 280 1 1103 232 187 27 chr10 16870929 16871159 -128718129 + L1MC4 LINE L1 7464 7656 -386 1726 155 13 43 chr10 16871159 16871463 -128717825 - AluJb SINE Alu -17 295 1 1103 232 187 27 chr10 16871463 16871607 -128717681 + L1MC4 LINE L1 7656 7898 -144 2150 217 58 26 chr10 16871662 16871887 -128717401 + L1MB5 LINE L1 5652 5868 -306 1639 140 21 92 chr10 16871887 16872223 -128717065 + AluJb SINE Alu 1 312 0 2150 217 58 26 chr10 16872223 16872519 -128716769 + L1MB5 LINE L1 5868 6174 0 2203 108 3 0 chr10 16872531 16872819 -128716469 + AluSx SINE Alu 1 289 -23 23 33 0 0 chr10 16872822 16872852 -128716436 + AT_rich Low_complexity Low_complexity 1 30 0 2200 134 0 0 chr10 16872854 16873159 -128716129 + AluSc SINE Alu 1 305 -4 1692 300 95 13 chr10 16873185 16873808 -128715480 - L2 LINE L2 -649 2665 1992 1528 142 58 52 chr10 16873809 16874153 -128715135 + MER4A LTR ERV1 1 346 -318 599 119 222 24 chr10 16874285 16874411 -128714877 + MER4C LTR ERV1 296 446 -19 1615 269 79 61 chr10 16874488 16874739 -128714549 - L1MCc LINE L1 -3667 3274 3029 1502 216 0 7 chr10 16874739 16875036 -128714252 + AluJo SINE Alu 1 295 -17 1615 269 79 61 chr10 16875036 16875182 -128714106 - L1MCc LINE L1 -3912 3029 2887 2328 88 0 28 chr10 16875182 16875502 -128713786 - AluY SINE Alu 0 311 1 1615 269 79 61 chr10 16875502 16876340 -128712948 - L1MCc LINE L1 -4054 2887 2030 299 169 17 0 chr10 16876347 16876406 -128712882 - AluSp/q SINE Alu 0 303 244 753 208 134 7 chr10 16876461 16876610 -128712678 - AluJb SINE Alu -59 253 86 855 288 79 26 chr10 16876610 16877287 -128712001 - L1MCc LINE L1 -4906 1517 1129 4042 113 13 0 chr10 16877637 16878184 -128711104 + MER41A LTR ERV1 1 554 0 2214 73 3 98 chr10 16878724 16878912 -128710376 - AluSp SINE Alu -6 297 152 2180 136 0 0 chr10 16878912 16879222 -128710066 - AluSx SINE Alu 0 312 3 2214 73 3 98 chr10 16879222 16879361 -128709927 - AluSp SINE Alu -151 152 1 3813 113 48 2 chr10 16879561 16880102 -128709186 + MER61E LTR ERV1 1 566 -3 527 247 88 18 chr10 16880216 16880386 -128708902 + MLT1C LTR MaLR 6 187 -280 1636 149 15 15 chr10 16880389 16880651 -128708637 + AluJo SINE Alu 12 273 -39 419 123 0 14 chr10 16880661 16880734 -128708554 + (GGA)n Simple_repeat Simple_repeat 1 72 0 1271 221 14 7 chr10 16880743 16881019 -128708269 + MLT1C LTR MaLR 188 465 -2 1778 135 12 0 chr10 16881395 16881654 -128707634 + AluSx SINE Alu 7 268 -44 234 91 0 0 chr10 16881664 16881697 -128707591 + (CA)n Simple_repeat Simple_repeat 2 34 0 3191 120 5 11 chr10 16881698 16882147 -128707141 + LTR8 LTR ERV1 246 691 0 499 223 150 50 chr10 16882165 16882385 -128706903 - MIR SINE MIR -12 250 9 921 178 25 93 chr10 16882784 16883020 -128706268 + AluJo SINE Alu 1 220 -92 2083 140 0 7 chr10 16883579 16883887 -128705401 - AluJb SINE Alu -6 306 1 1918 140 7 27 chr10 16884244 16884544 -128704744 + AluSx SINE Alu 1 294 -18 1782 157 0 7 chr10 16884980 16885267 -128704021 - AluJo SINE Alu -27 285 1 799 306 92 25 chr10 16885314 16885470 -128703818 - MLT1L LTR MaLR -8 607 463 619 216 9 0 chr10 16885470 16885581 -128703707 - MER81 DNA DNA -2 112 1 799 306 92 25 chr10 16885581 16885905 -128703383 - MLT1L LTR MaLR -152 463 95 1606 134 4 4 chr10 16885927 16886159 -128703129 + AluJo SINE Alu 43 274 -38 2028 128 0 0 chr10 16889078 16889360 -128699928 + AluSx SINE Alu 18 299 -13 864 168 0 0 chr10 16889417 16889548 -128699740 - FLAM_C SINE Alu -12 131 1 785 334 102 5 chr10 16889576 16889968 -128699320 + LTR16A LTR ERVL 1 430 -20 836 138 16 0 chr10 16890257 16890380 -128698908 - FLAM_C SINE Alu -7 126 2 1952 146 7 0 chr10 16890432 16890719 -128698569 + AluSx SINE Alu 5 293 -19 29 28 0 0 chr10 16890742 16890778 -128698510 + AT_rich Low_complexity Low_complexity 1 36 0 1228 269 99 17 chr10 16890976 16891564 -128697724 + L1ME2 LINE L1 3915 4550 -1596 1108 226 54 10 chr10 16891558 16891872 -128697416 + L1ME2 LINE L1 5579 5906 -258 * 1426 196 11 8 chr10 16891872 16892138 -128697150 + AluJo SINE Alu 1 267 -45 25 0 0 0 chr10 16892142 16892167 -128697121 + AT_rich Low_complexity Low_complexity 1 25 0 480 94 0 188 chr10 16892168 16892253 -128697035 - L1PB3 LINE L1 -2 6152 6093 2197 121 0 16 chr10 16892253 16892568 -128696720 - AluSx SINE Alu -2 310 1 480 94 0 188 chr10 16892568 16892599 -128696689 - L1PB3 LINE L1 -61 6093 6058 951 215 46 15 chr10 16892636 16892897 -128696391 + L1ME2 LINE L1 5896 6164 0 673 266 135 54 chr10 16893032 16893232 -128696056 - LTR33 LTR ERVL -8 513 331 1578 173 0 55 chr10 16893232 16893539 -128695749 + AluJo SINE Alu 1 290 -22 673 266 135 54 chr10 16893539 16893804 -128695484 - LTR33 LTR ERVL -190 331 10 885 148 0 15 chr10 16893910 16894045 -128695243 - FLAM_C SINE Alu 0 133 1 1082 265 95 8 chr10 16895527 16895927 -128693361 - Zaphod DNA AcHobo -1 4030 3596 936 187 117 35 chr10 16895956 16896272 -128693016 - Zaphod DNA AcHobo -3081 950 609 1084 164 0 17 chr10 16896280 16896457 -128692831 - AluJo/FRAM SINE Alu -5 307 134 1748 158 10 3 chr10 16896457 16896748 -128692540 - AluSx SINE Alu -16 296 4 513 283 26 112 chr10 16896752 16897056 -128692232 - Zaphod DNA AcHobo -3417 614 337 2383 105 0 0 chr10 16897066 16897371 -128691917 + AluSg SINE Alu 1 305 -5 364 284 16 74 chr10 16897410 16897530 -128691758 - Zaphod DNA AcHobo -3696 335 228 2313 107 3 0 chr10 16897530 16897829 -128691459 + AluSx SINE Alu 1 300 -12 364 284 16 74 chr10 16897829 16897898 -128691390 - Zaphod DNA AcHobo -3803 228 157 589 163 0 0 chr10 16898194 16898292 -128690996 + FLAM_C SINE Alu 13 110 -33 26 30 0 0 chr10 16898308 16898341 -128690947 + AT_rich Low_complexity Low_complexity 1 33 0 2146 119 7 0 chr10 16898359 16898654 -128690634 + AluSq SINE Alu 1 297 -16 992 151 0 12 chr10 16898696 16898868 -128690420 + L1MA6 LINE L1 6131 6300 0 1784 139 13 43 chr10 16899010 16899313 -128689975 - AluJb SINE Alu -18 294 1 1686 156 46 29 chr10 16899710 16900017 -128689271 - AluJo SINE Alu 0 312 1 2095 113 3 46 chr10 16900982 16901309 -128687979 + AluSq SINE Alu 1 313 0 1613 177 7 11 chr10 16901995 16902278 -128687010 + AluJb SINE Alu 1 282 -30 2165 118 7 0 chr10 16904095 16904392 -128684896 + AluSx SINE Alu 1 299 -13 1494 178 7 36 chr10 16905533 16905675 -128683613 + AluJo SINE Alu 1 133 -179 2248 102 7 0 chr10 16905675 16905968 -128683320 + AluSx SINE Alu 1 295 -17 1494 178 7 36 chr10 16905968 16906106 -128683182 + AluJo SINE Alu 133 273 -39 197 319 43 21 chr10 16906400 16906494 -128682794 + MIR SINE MIR 31 126 -136 661 210 0 108 chr10 16906549 16906667 -128682621 + MER69A DNA AcHobo 4 94 -2432 1581 138 88 72 chr10 16906667 16906972 -128682316 - AluJb SINE Alu 0 312 3 661 210 0 108 chr10 16906972 16907048 -128682240 + MER69A DNA AcHobo 94 177 0 2115 96 6 53 chr10 16907307 16907629 -128681659 + AluSg SINE Alu 1 307 -3 1884 166 3 3 chr10 16907754 16908062 -128681226 + AluJo SINE Alu 1 308 -4 904 217 81 83 chr10 16908235 16908289 -128680999 + LOR1b LTR ERV1 66 119 -342 2522 50 0 3 chr10 16908289 16908587 -128680701 - AluY SINE Alu -14 297 1 904 217 81 83 chr10 16908587 16908929 -128680359 + LOR1b LTR ERV1 119 461 0 1249 167 194 8 chr10 16909165 16909417 -128679871 - AluJo SINE Alu -13 299 1 207 167 0 0 chr10 16909495 16909537 -128679751 + CT-rich Low_complexity Low_complexity 3 44 0 2260 119 3 0 chr10 16909577 16909887 -128679401 - AluSx SINE Alu -1 311 1 349 264 38 130 chr10 16910059 16910298 -128678990 + L3 LINE CR1 583 799 -778 2183 106 0 17 chr10 16910367 16910659 -128678629 - AluSx SINE Alu -25 287 1 419 316 176 35 chr10 16910748 16911175 -128678113 + L3 LINE CR1 1021 1507 -70 1988 122 3 14 chr10 16911327 16911671 -128677617 + AluSx SINE Alu 1 341 0 385 259 0 53 chr10 16911726 16911857 -128677431 - L2 LINE L2 -7 3306 3183 209 331 39 62 chr10 16913634 16913764 -128675524 - L2 LINE L2 -1 3312 3186 1599 173 0 19 chr10 16913800 16914102 -128675186 - AluJb SINE Alu 0 318 22 2355 110 0 0 chr10 16914129 16914438 -128674850 + AluSg SINE Alu 1 309 -1 23 0 0 0 chr10 16914488 16914511 -128674777 + AT_rich Low_complexity Low_complexity 1 23 0 1333 123 5 5 chr10 16914531 16914718 -128674570 - AluSx SINE Alu -125 187 1 2065 127 7 0 chr10 16915106 16915397 -128673891 - AluSq SINE Alu -20 293 1 213 342 0 0 chr10 16915888 16915967 -128673321 + L2 LINE L2 2900 2978 -294 255 138 31 15 chr10 16916030 16916095 -128673193 + (TAA)n Simple_repeat Simple_repeat 2 67 0 1410 227 4 4 chr10 16916097 16916375 -128672913 - AluJo SINE Alu -28 284 7 1868 196 105 47 chr10 16916443 16916908 -128672380 - MLT1D LTR MaLR -10 495 4 2099 138 0 0 chr10 16917005 16917303 -128671985 + AluSx SINE Alu 1 298 -14 192 309 0 0 chr10 16917342 16917397 -128671891 + L2 LINE L2 3240 3294 -19 1568 104 35 35 chr10 16917619 16917850 -128671438 + AluSx SINE Alu 64 294 -18 640 281 6 0 chr10 16917850 16918010 -128671278 + MER58B DNA MER1_type 181 341 0 584 173 0 10 chr10 16918051 16918155 -128671133 - U13 snRNA snRNA -1 103 1 2072 154 0 0 chr10 16918172 16918470 -128670818 + AluSx SINE Alu 1 298 -14 194 0 39 0 chr10 16918546 16918572 -128670716 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1830 184 3 3 chr10 16918980 16919289 -128669999 + AluJb SINE Alu 1 309 -3 2453 64 0 0 chr10 16919486 16919820 -128669468 - AluY SINE Alu 0 334 1 281 292 32 52 chr10 16919942 16920096 -128669192 + MIR SINE MIR 47 197 -65 1843 137 4 14 chr10 16921173 16921450 -128667838 - AluJo SINE Alu -25 287 14 2767 156 8 35 chr10 16921796 16921894 -128667394 - MER66B LTR ERV1 0 486 387 2212 88 0 0 chr10 16921894 16922168 -128667120 - AluSg SINE Alu -18 292 19 2767 156 8 35 chr10 16922168 16922488 -128666800 - MER66B LTR ERV1 -99 387 80 1870 119 0 32 chr10 16922488 16922773 -128666515 - AluSx SINE Alu -36 276 1 2767 156 8 35 chr10 16922773 16922846 -128666442 - MER66B LTR ERV1 -406 80 7 217 360 27 9 chr10 16922880 16922991 -128666297 + MIR SINE MIR 50 162 -100 225 108 0 0 chr10 16924519 16924556 -128664732 + (TC)n Simple_repeat Simple_repeat 1 37 0 1790 160 34 0 chr10 16924635 16924928 -128664360 - AluJo SINE Alu -5 307 5 990 189 13 57 chr10 16925217 16925445 -128663843 - MER20 DNA MER1_type -1 218 1 2936 153 87 0 chr10 16925453 16925938 -128663350 + MER1A DNA MER1_type 1 527 0 1525 198 116 6 chr10 16926162 16926491 -128662797 + MLT1A1 LTR MaLR 1 365 0 343 298 43 43 chr10 16926545 16926733 -128662555 + MIR SINE MIR 20 207 -55 2044 105 7 7 chr10 16928640 16928917 -128660371 + AluSx SINE Alu 30 306 -6 225 119 0 0 chr10 16928952 16928994 -128660294 + (TC)n Simple_repeat Simple_repeat 2 43 0 222 118 0 0 chr10 16928994 16929028 -128660260 + (CA)n Simple_repeat Simple_repeat 1 34 0 536 141 0 0 chr10 16929884 16929962 -128659326 + AluS SINE Alu 2 79 -234 1006 188 12 6 chr10 16929962 16930132 -128659156 + Tigger3(Golem) DNA MER2_type 2858 3028 -1 186 191 0 0 chr10 16930312 16930359 -128658929 + A-rich Low_complexity Low_complexity 1 47 0 2237 120 0 0 chr10 16930466 16930765 -128658523 - AluSc SINE Alu -10 299 1 624 245 32 7 chr10 16931173 16931328 -128657960 - Zaphod DNA AcHobo -3407 624 466 1027 115 0 0 chr10 16931340 16931479 -128657809 - FLAM_C SINE Alu -1 142 4 886 282 55 11 chr10 16931484 16931757 -128657531 - Zaphod DNA AcHobo -3559 472 188 2170 135 0 3 chr10 16931834 16932137 -128657151 + AluSx SINE Alu 1 302 -10 684 225 0 0 chr10 16932137 16932297 -128656991 + GA-rich Low_complexity Low_complexity 1 160 0 1153 229 122 24 chr10 16932397 16932733 -128656555 - L1MC4 LINE L1 -1198 6844 6476 2172 134 0 0 chr10 16933161 16933468 -128655820 - AluSx SINE Alu -3 309 3 276 250 23 23 chr10 16933814 16933902 -128655386 - L1MC5 LINE L1 -36 7925 7838 820 152 0 0 chr10 16934206 16934331 -128654957 + FLAM_C SINE Alu 2 126 -7 565 149 190 0 chr10 16934484 16934605 -128654683 + FRAM SINE Alu 18 161 -15 1946 122 27 3 chr10 16934605 16934899 -128654389 + AluSc SINE Alu 1 301 -8 207 0 0 0 chr10 16935270 16935293 -128653995 + (A)n Simple_repeat Simple_repeat 1 23 0 348 295 16 74 chr10 16935332 16935452 -128653836 - Zaphod DNA AcHobo -3696 335 228 2162 120 3 0 chr10 16935452 16935751 -128653537 + AluSx SINE Alu 1 300 -12 348 295 16 74 chr10 16935751 16935820 -128653468 - Zaphod DNA AcHobo -3803 228 157 589 163 0 0 chr10 16936115 16936213 -128653075 + FLAM_C SINE Alu 13 110 -33 26 30 0 0 chr10 16936231 16936264 -128653024 + AT_rich Low_complexity Low_complexity 1 33 0 2146 119 7 0 chr10 16936282 16936577 -128652711 + AluSq SINE Alu 1 297 -16 992 151 0 12 chr10 16936619 16936791 -128652497 + L1MA6 LINE L1 6131 6300 0 1607 141 20 53 chr10 16936933 16937237 -128652051 - AluJb SINE Alu -18 294 1 7668 81 1 1 chr10 16937668 16938628 -128650660 + HERVL LTR ERVL 2716 3675 -1979 1367 194 23 27 chr10 16938986 16939285 -128650003 + AluJo SINE Alu 14 311 -1 1265 158 0 0 chr10 16939300 16939490 -128649798 + AluSx SINE Alu 16 205 -107 2237 123 3 0 chr10 16940187 16940487 -128648801 + AluSx SINE Alu 1 301 -11 246 62 0 0 chr10 16940582 16940614 -128648674 + (TCCA)n Simple_repeat Simple_repeat 3 34 0 200 329 80 59 chr10 16940842 16941079 -128648209 - L2 LINE L2 -219 3053 2812 986 153 6 0 chr10 16941753 16941930 -128647358 + GA-rich Low_complexity Low_complexity 3 180 0 633 186 7 71 chr10 16941934 16942074 -128647214 - FLAM_C SINE Alu -2 131 1 201 143 0 0 chr10 16942129 16942164 -128647124 + (TTCC)n Simple_repeat Simple_repeat 4 38 0 275 326 12 0 chr10 16942265 16942351 -128646937 - ERVL LTR ERVL -2560 3204 3118 1747 243 88 36 chr10 16942378 16942617 -128646671 - LTR68 LTR ERV1 -4 736 511 2256 127 0 0 chr10 16942617 16942925 -128646363 - AluSx SINE Alu -4 308 1 1747 243 88 36 chr10 16942925 16943295 -128645993 - LTR68 LTR ERV1 -229 511 1 1281 196 25 83 chr10 16943401 16943728 -128645560 - AluJb SINE Alu -4 308 1 2034 104 0 83 chr10 16943739 16944076 -128645212 - AluSx SINE Alu -3 309 1 2278 121 0 0 chr10 16944557 16944863 -128644425 - AluSx SINE Alu -6 306 1 2019 116 4 4 chr10 16945150 16945450 -128643838 - AluSx SINE Alu 0 315 16 498 171 0 45 chr10 16945896 16945984 -128643304 + MER21B LTR ERV1 1 84 -779 2127 116 0 3 chr10 16945987 16946272 -128643016 - AluSx SINE Alu -9 303 20 5333 67 4 3 chr10 16946278 16946955 -128642333 + MER4E LTR ERV1 89 766 0 2302 105 0 0 chr10 16947538 16947833 -128641455 + AluSx SINE Alu 6 300 -12 1911 151 7 0 chr10 16947848 16948127 -128641161 + AluSq SINE Alu 5 285 -28 1825 213 3 19 chr10 16948504 16948875 -128640413 - MLT1A1 LTR MaLR 0 365 1 591 219 0 8 chr10 16948944 16949063 -128640225 - FLAM_C SINE Alu -10 133 16 2005 125 4 4 chr10 16949346 16949654 -128639634 - AluSc SINE Alu 0 308 1 1862 143 3 44 chr10 16949657 16949972 -128639316 - AluJo SINE Alu -10 302 1 21 0 0 0 chr10 16950864 16950885 -128638403 + AT_rich Low_complexity Low_complexity 1 21 0 775 123 15 23 chr10 16952340 16952470 -128636818 + FLAM_C SINE Alu 4 132 -1 2215 119 7 0 chr10 16952879 16953173 -128636115 + AluSx SINE Alu 1 296 -16 1822 152 6 48 chr10 16953429 16953603 -128635685 - AluJo SINE Alu -9 303 123 188 35 35 0 chr10 16953603 16953632 -128635656 + (TTG)n Simple_repeat Simple_repeat 1 30 0 2073 132 0 0 chr10 16953632 16953913 -128635375 - AluSx SINE Alu -31 281 1 1822 152 6 48 chr10 16953913 16954053 -128635235 - AluJo SINE Alu -187 125 1 211 278 0 42 chr10 16954389 16954461 -128634827 + MIR3 SINE MIR 138 206 -2 216 97 0 0 chr10 16954708 16954739 -128634549 + (CA)n Simple_repeat Simple_repeat 1 31 0 199 258 97 0 chr10 16954827 16954889 -128634399 - MIR SINE MIR -1 261 194 1703 158 0 7 chr10 16954897 16955169 -128634119 - AluJo SINE Alu -16 296 27 270 278 193 52 chr10 16955188 16955226 -128634062 + MIR SINE MIR 21 52 -210 2546 98 13 16 chr10 16955226 16955602 -128633686 - THE1C LTR MaLR 0 375 1 270 278 193 52 chr10 16955602 16955775 -128633513 + MIR SINE MIR 52 262 0 2183 115 3 3 chr10 16956003 16956298 -128632990 - AluSx SINE Alu -17 295 1 1644 124 9 0 chr10 16956298 16956530 -128632758 - AluSg/x SINE Alu -14 298 65 446 175 12 0 chr10 16956797 16956877 -128632411 - MLT1J LTR MaLR -359 152 72 219 304 116 9 chr10 16956940 16957052 -128632236 - MIR SINE MIR -108 154 31 34 55 0 0 chr10 16957221 16957276 -128632012 + AT_rich Low_complexity Low_complexity 1 55 0 1803 157 0 26 chr10 16957448 16957753 -128631535 - AluJb SINE Alu -15 297 1 456 165 13 0 chr10 16958259 16958338 -128630950 - MLT1J2 LTR MaLR -2 448 369 1192 131 0 0 chr10 16958360 16958528 -128630760 - AluSg/x SINE Alu -8 304 137 736 243 98 8 chr10 16958564 16958855 -128630433 - MLT1J2 LTR MaLR -103 343 20 1904 132 8 0 chr10 16958980 16959246 -128630042 + AluSx SINE Alu 14 281 -31 577 94 58 0 chr10 16959248 16959386 -128629902 + (TA)n Simple_repeat Simple_repeat 2 147 0 2049 187 80 67 chr10 16959541 16959894 -128629394 - L1MB4 LINE L1 0 6180 5814 2210 129 0 3 chr10 16959894 16960205 -128629083 - AluSq SINE Alu -3 310 1 2049 187 80 67 chr10 16960205 16960466 -128628822 - L1MB4 LINE L1 -366 5814 5558 2249 76 31 3 chr10 16960613 16960901 -128628387 + AluSc SINE Alu 1 296 -13 1720 167 3 50 chr10 16961958 16962134 -128627154 - AluSx SINE Alu -4 308 125 216 0 0 0 chr10 16962134 16962158 -128627130 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1996 123 14 0 chr10 16962158 16962311 -128626977 - AluSg1 SINE Alu -28 281 121 189 74 0 0 chr10 16962311 16962338 -128626950 + (TG)n Simple_repeat Simple_repeat 2 28 0 1996 123 14 0 chr10 16962338 16962461 -128626827 - AluSg1 SINE Alu -188 121 1 1720 167 3 50 chr10 16962461 16962606 -128626682 - AluSx SINE Alu -185 127 1 2169 125 3 0 chr10 16962870 16963165 -128626123 - AluSx SINE Alu -16 296 1 2099 116 0 10 chr10 16963741 16964052 -128625236 + AluSx SINE Alu 3 312 0 1819 144 0 4 chr10 16964381 16964651 -128624637 + AluJo SINE Alu 1 269 -43 21 0 0 0 chr10 16964657 16964678 -128624610 + AT_rich Low_complexity Low_complexity 1 21 0 2855 132 73 119 chr10 16964695 16965378 -128623910 + MER39B LTR ERV1 2 653 0 1803 97 14 42 chr10 16966366 16966654 -128622634 - AluJo SINE Alu -11 301 22 2316 94 7 0 chr10 16967038 16967335 -128621953 - AluSg SINE Alu -11 299 1 1335 154 50 93 chr10 16967341 16967621 -128621667 - AluJb SINE Alu -25 287 20 272 136 45 0 chr10 16967755 16967799 -128621489 + AluJo SINE Alu 118 163 -139 1902 116 33 7 chr10 16967812 16968088 -128621200 + AluSx SINE Alu 18 300 -12 188 208 57 0 chr10 16968351 16968404 -128620884 - L2 LINE L2 -1241 2073 2018 837 142 0 15 chr10 16968878 16969012 -128620276 - FLAM_C SINE Alu -1 132 1 1886 131 60 7 chr10 16969217 16969500 -128619788 - AluSx SINE Alu -14 298 1 192 158 0 0 chr10 16969552 16969590 -128619698 + A-rich Low_complexity Low_complexity 1 38 0 1097 248 57 19 chr10 16969708 16970026 -128619262 + MLT1I LTR MaLR 71 400 -9 818 95 26 9 chr10 16971638 16971754 -128617534 + FLAM_C SINE Alu 1 118 -25 2103 132 26 0 chr10 16971847 16972150 -128617138 + AluSx SINE Alu 1 311 -1 1977 163 89 6 chr10 16972227 16972577 -128616711 - MLT1B LTR MaLR -9 381 3 2246 92 24 0 chr10 16973148 16973442 -128615846 - AluSc SINE Alu -8 301 1 646 134 177 49 chr10 16973442 16973606 -128615682 - AluJo SINE Alu -15 297 113 841 144 0 0 chr10 16973716 16973841 -128615447 - AluJo SINE Alu -176 126 2 286 250 23 23 chr10 16974145 16974233 -128615055 + L1MC5 LINE L1 7838 7925 -36 1173 108 0 24 chr10 16974415 16974582 -128614706 + AluSg/x SINE Alu 137 299 -13 1327 143 9 19 chr10 16975370 16975586 -128613702 - AluSg/x SINE Alu -15 297 84 207 0 0 0 chr10 16975914 16975937 -128613351 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1990 161 0 0 chr10 16975939 16976238 -128613050 - AluSx SINE Alu -13 299 1 1785 164 22 22 chr10 16976238 16976550 -128612738 - AluJo SINE Alu 0 312 1 13002 83 1 1 chr10 16976894 16978529 -128610759 - HERVL-A2 LTR ERVL -1979 3675 2041 662 87 0 39 chr10 16978573 16978676 -128610612 - AluSg/x SINE Alu -4 305 207 11001 112 5 6 chr10 16978676 16980194 -128609094 - HERVL-A2 LTR ERVL -4100 1554 39 1932 151 32 11 chr10 16980194 16980549 -128608739 - MLT2A2 LTR ERVL -149 304 1 2200 129 0 10 chr10 16980577 16980888 -128608400 + AluSx SINE Alu 2 309 -3 326 257 0 19 chr10 16981077 16981182 -128608106 + MER113 DNA MER1_type? 12 114 -407 261 139 0 0 chr10 16981344 16981387 -128607901 + (CA)n Simple_repeat Simple_repeat 2 44 0 1957 162 0 19 chr10 16981443 16981752 -128607536 - AluSx SINE Alu -9 303 1 420 219 0 0 chr10 16981768 16981896 -128607392 + CT-rich Low_complexity Low_complexity 1 128 0 2071 117 11 0 chr10 16981916 16982199 -128607089 - AluSx SINE Alu -26 286 1 788 157 0 0 chr10 16982250 16982365 -128606923 - FLAM_C SINE Alu -18 115 1 188 163 23 0 chr10 16982497 16982540 -128606748 + (TA)n Simple_repeat Simple_repeat 2 45 0 445 209 45 18 chr10 16983019 16983129 -128606159 - MIR3 SINE MIR -4 204 92 2117 124 14 3 chr10 16983443 16983733 -128605555 + AluSx SINE Alu 2 294 -18 251 108 36 60 chr10 16983926 16984009 -128605279 + (TAA)n Simple_repeat Simple_repeat 1 81 0 1909 176 0 0 chr10 16984096 16984398 -128604890 + AluJb SINE Alu 1 302 -10 1744 187 7 0 chr10 16984561 16984850 -128604438 + AluJo SINE Alu 4 294 -18 241 242 32 0 chr10 16985367 16985429 -128603859 - L2 LINE L2 0 3272 3209 1909 123 93 30 chr10 16985900 16986233 -128603055 + THE1B LTR MaLR 1 354 -10 2502 39 0 3 chr10 16986346 16986662 -128602626 - AluY SINE Alu 0 315 1 1917 140 3 32 chr10 16986750 16987058 -128602230 - AluSx SINE Alu -13 299 1 286 288 62 27 chr10 16988113 16988259 -128601029 - L1ME4a LINE L1 -14 6107 5957 1906 128 7 3 chr10 16988873 16989197 -128600091 - AluSp SINE Alu 0 325 1 192 338 13 0 chr10 16989550 16989627 -128599661 + MIR3 SINE MIR 117 194 -14 24 77 0 0 chr10 16989660 16989712 -128599576 + AT_rich Low_complexity Low_complexity 1 52 0 21 57 0 0 chr10 16989819 16989854 -128599434 + AT_rich Low_complexity Low_complexity 1 35 0 1891 104 82 0 chr10 16989898 16990166 -128599122 - AluSx SINE Alu -22 290 1 202 202 0 45 chr10 16990427 16990516 -128598772 + (TTAAA)n Simple_repeat Simple_repeat 3 87 0 2245 117 0 0 chr10 16991137 16991435 -128597853 - AluSq SINE Alu -15 298 1 2293 117 0 0 chr10 16991720 16992020 -128597268 - AluSx SINE Alu -12 300 1 16153 59 4 4 chr10 16992173 16994213 -128595075 + L1P LINE L1 267 2307 -3839 1627 124 0 28 chr10 16994313 16994563 -128594725 + AluY SINE Alu 62 304 -7 2284 93 0 16 chr10 16994746 16995056 -128594232 - AluSx SINE Alu -7 305 1 194 321 0 0 chr10 16995199 16995255 -128594033 - L3b LINE CR1 -263 1320 1265 * 197 179 26 0 chr10 16995252 16995291 -128593997 + MIR SINE MIR 118 157 -105 2592 115 3 6 chr10 16996129 16996494 -128592794 - THE1B LTR MaLR 0 364 1 2071 153 30 21 chr10 16997037 16997409 -128591879 - THE1C LTR MaLR 0 375 1 2053 138 0 0 chr10 16997707 16997996 -128591292 - AluSx SINE Alu -23 289 1 1865 163 15 18 chr10 16998437 16998768 -128590520 + MER44D DNA MER2_type 10 609 0 1928 144 38 0 chr10 16998871 16999163 -128590125 + AluSq SINE Alu 2 304 -9 2226 113 0 0 chr10 16999400 16999693 -128589595 + AluSx SINE Alu 1 293 -19 1870 159 3 19 chr10 17000033 17000342 -128588946 + AluJo SINE Alu 1 304 -8 238 328 98 29 chr10 17000764 17000938 -128588350 - L2 LINE L2 -671 2643 2458 1212 161 13 27 chr10 17000996 17001220 -128588068 - AluJo SINE Alu -91 221 1 189 94 0 0 chr10 17001221 17001253 -128588035 + (T)n Simple_repeat Simple_repeat 1 32 0 290 271 225 0 chr10 17001498 17001627 -128587661 + MIR SINE MIR 93 250 -12 2255 108 0 0 chr10 17001830 17002125 -128587163 + AluSx SINE Alu 5 299 -13 763 228 138 105 chr10 17002743 17003314 -128585974 - L1ME4a LINE L1 -3 6118 5529 21 36 0 0 chr10 17003575 17003603 -128585685 + AT_rich Low_complexity Low_complexity 1 28 0 2453 133 23 0 chr10 17003648 17004002 -128585286 + THE1B LTR MaLR 3 364 0 905 70 0 0 chr10 17004774 17004888 -128584400 + AluSg/x SINE Alu 195 308 -2 245 207 146 37 chr10 17005121 17005203 -128584085 + MIR SINE MIR 77 167 -95 1559 114 0 5 chr10 17005276 17005487 -128583801 + AluSg SINE Alu 1 210 -100 1797 194 14 20 chr10 17005887 17005946 -128583342 - MLT1A1 LTR MaLR -12 353 295 2199 113 0 3 chr10 17005946 17006247 -128583041 + AluSg SINE Alu 1 300 -10 1797 194 14 20 chr10 17006247 17006532 -128582756 - MLT1A1 LTR MaLR -70 295 11 384 280 158 67 chr10 17006536 17007012 -128582276 - MLT1H1 LTR MaLR -29 526 2 462 68 0 0 chr10 17007343 17007402 -128581886 + U2 snRNA snRNA 1 59 -129 21 0 0 0 chr10 17007417 17007438 -128581850 + AT_rich Low_complexity Low_complexity 1 21 0 2151 103 7 0 chr10 17007438 17007720 -128581568 - AluSg SINE Alu -26 284 1 251 269 65 32 chr10 17007803 17007896 -128581392 - MIR SINE MIR -114 148 53 1645 185 30 20 chr10 17007904 17008202 -128581086 - AluJb SINE Alu -10 302 2 1832 184 7 0 chr10 17008239 17008544 -128580744 - AluJo SINE Alu -5 307 1 402 21 0 0 chr10 17008599 17008646 -128580642 + (TAGA)n Simple_repeat Simple_repeat 3 49 0 932 144 0 0 chr10 17008685 17008817 -128580471 - AluSq/x SINE Alu -180 132 1 390 251 24 9 chr10 17008936 17009046 -128580242 - MIR3 SINE MIR -40 168 56 2257 107 0 0 chr10 17009676 17009974 -128579314 - AluSq SINE Alu -15 298 1 290 122 0 0 chr10 17011287 17011328 -128577960 + MADE1 DNA Mariner 1 41 -39 1989 140 14 0 chr10 17012110 17012403 -128576885 - AluSx SINE Alu -9 303 7 410 271 96 23 chr10 17012576 17012753 -128576535 - MLT1K LTR MaLR 0 588 399 2431 133 93 6 chr10 17013463 17013937 -128575351 - L1MA2 LINE L1 0 6304 5790 291 280 0 0 chr10 17014252 17014327 -128574961 + LTR16C LTR ERVL 414 488 -3 221 343 0 27 chr10 17014327 17014400 -128574888 - MIR SINE MIR -190 72 2 1876 101 4 4 chr10 17014412 17014659 -128574629 + AluSq SINE Alu 35 281 -32 194 0 39 0 chr10 17014659 17014685 -128574603 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 311 181 64 29 chr10 17015411 17015582 -128573706 + (CCGCG)n Simple_repeat Simple_repeat 4 180 0 312 330 28 0 chr10 17015973 17016079 -128573209 + MIR SINE MIR 81 189 -73 1724 159 135 24 chr10 17016125 17016496 -128572792 - MSTA LTR MaLR 0 428 17 6124 182 13 6 chr10 17016908 17018498 -128570790 - L1MC1 LINE L1 -25 6308 4708 1224 175 61 8 chr10 17018660 17018924 -128570364 - L1M LINE L1 -801 5345 5074 3382 211 39 7 chr10 17018925 17019751 -128569537 + L1 LINE L1 4160 5011 -1135 306 287 10 20 chr10 17021847 17021948 -128567340 - MIR SINE MIR -72 190 91 27 0 0 0 chr10 17022070 17022097 -128567191 + AT_rich Low_complexity Low_complexity 1 27 0 618 260 148 9 chr10 17022847 17023070 -128566218 + MIR SINE MIR 2 255 -7 9224 71 2 11 chr10 17024009 17025294 -128563994 + L1P LINE L1 685 2091 -4055 357 214 36 0 chr10 17025433 17025517 -128563771 - MLT2E LTR ERVL -35 593 507 2116 129 0 20 chr10 17025558 17025860 -128563428 - AluSx SINE Alu -16 296 1 190 396 42 7 chr10 17027796 17027940 -128561348 - MIR SINE MIR -6 256 108 2249 102 0 3 chr10 17028153 17028447 -128560841 - AluSx SINE Alu -19 293 1 26 30 0 0 chr10 17028447 17028480 -128560808 + AT_rich Low_complexity Low_complexity 1 33 0 1967 133 7 20 chr10 17028930 17029230 -128560058 + AluSx SINE Alu 1 296 -16 198 0 0 0 chr10 17029675 17029697 -128559591 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 214 288 0 0 chr10 17030807 17030866 -128558422 + (TA)n Simple_repeat Simple_repeat 1 59 0 655 215 0 30 chr10 17031177 17031312 -128557976 + FLAM_A SINE Alu 1 131 -2 1101 227 102 69 chr10 17032531 17032980 -128556308 - MLT1C LTR MaLR 0 467 4 533 93 67 0 chr10 17033282 17033357 -128555931 + AluJ/FRAM SINE Alu 216 295 -17 24 0 0 0 chr10 17033943 17033967 -128555321 + AT_rich Low_complexity Low_complexity 1 24 0 225 0 0 0 chr10 17033968 17033993 -128555295 + (GA)n Simple_repeat Simple_repeat 1 25 0 1573 203 0 0 chr10 17033997 17034268 -128555020 - AluJb SINE Alu -41 271 1 758 259 64 69 chr10 17034288 17034836 -128554452 - L1MEd LINE L1 -4867 1252 708 631 138 26 10 chr10 17034991 17035186 -128554102 - L1MB2 LINE L1 -1 6170 5887 330 318 96 70 chr10 17035186 17035349 -128553939 - L1MEd LINE L1 -5555 564 407 2223 167 19 3 chr10 17035349 17035709 -128553579 - MER47A DNA MER2_type 0 366 1 330 318 96 70 chr10 17035709 17036086 -128553202 - L1MEd LINE L1 -5712 407 10 272 197 0 14 chr10 17036299 17036370 -128552918 + (CATATA)n Simple_repeat Simple_repeat 2 71 0 183 247 202 22 chr10 17038386 17038475 -128550813 - L2 LINE L2 0 3272 3168 690 148 14 84 chr10 17038790 17038932 -128550356 - FLAM_C SINE Alu -1 132 1 281 247 0 11 chr10 17039031 17039124 -128550164 + GA-rich Low_complexity Low_complexity 1 92 0 24 0 0 0 chr10 17040142 17040166 -128549122 + AT_rich Low_complexity Low_complexity 1 24 0 22 70 0 0 chr10 17040331 17040374 -128548914 + AT_rich Low_complexity Low_complexity 1 43 0 2172 133 3 0 chr10 17040532 17040833 -128548455 - AluSx SINE Alu -10 302 1 308 313 101 80 chr10 17041466 17042168 -128547120 + L2 LINE L2 2538 3267 -5 246 62 0 0 chr10 17042170 17042202 -128547086 + (TGGA)n Simple_repeat Simple_repeat 3 34 0 2220 123 3 0 chr10 17042297 17042597 -128546691 - AluSx SINE Alu -11 301 1 2075 100 13 39 chr10 17043654 17043963 -128545325 + AluSx SINE Alu 1 301 -11 365 250 158 18 chr10 17044401 17044565 -128544723 + MIR SINE MIR 8 194 -68 1699 158 0 21 chr10 17044772 17045098 -128544190 - AluJb SINE Alu 0 329 10 692 131 62 46 chr10 17045258 17045388 -128543900 - FLAM_C SINE Alu 0 143 12 1812 133 0 84 chr10 17045592 17045915 -128543373 - AluJo SINE Alu -16 296 1 1036 173 0 0 chr10 17046093 17046266 -128543022 - FRAM SINE Alu -1 175 3 2222 129 3 0 chr10 17046283 17046594 -128542694 - AluSx SINE Alu 0 312 1 516 32 0 0 chr10 17046692 17046754 -128542534 + (CA)n Simple_repeat Simple_repeat 2 63 0 336 264 11 0 chr10 17047237 17047324 -128541964 + MIR SINE MIR 167 254 -8 2344 100 0 0 chr10 17048073 17048374 -128540914 + AluSx SINE Alu 4 304 -8 198 0 0 0 chr10 17048429 17048451 -128540837 + (T)n Simple_repeat Simple_repeat 1 22 0 1003 128 0 0 chr10 17048451 17048584 -128540704 - AluSq/x SINE Alu -179 133 1 2019 115 28 7 chr10 17048596 17048757 -128540531 - AluSx SINE Alu -18 294 123 2360 112 0 3 chr10 17048757 17049069 -128540219 - AluSx SINE Alu -1 311 1 2019 115 28 7 chr10 17049069 17049195 -128540093 - AluSx SINE Alu -189 123 1 35 24 0 0 chr10 17049743 17049785 -128539503 + AT_rich Low_complexity Low_complexity 1 42 0 864 319 63 13 chr10 17049858 17050241 -128539047 + MARNA DNA Mariner 170 571 -15 190 343 121 28 chr10 17051270 17051701 -128537587 - L2 LINE L2 -1131 2183 1713 353 175 0 12 chr10 17052565 17052645 -128536643 + (TA)n Simple_repeat Simple_repeat 2 80 0 185 322 30 69 chr10 17052650 17052852 -128536436 - L2 LINE L2 -2408 906 713 21 36 0 0 chr10 17053189 17053217 -128536071 + AT_rich Low_complexity Low_complexity 1 28 0 2647 58 0 0 chr10 17053421 17053732 -128535556 - AluY SINE Alu 0 311 1 29 60 0 0 chr10 17054018 17054068 -128535220 + AT_rich Low_complexity Low_complexity 1 50 0 22 0 0 0 chr10 17055233 17055255 -128534033 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr10 17058074 17058098 -128531190 + AT_rich Low_complexity Low_complexity 1 24 0 211 254 42 17 chr10 17058757 17058875 -128530413 + (TA)n Simple_repeat Simple_repeat 2 122 0 25 31 0 0 chr10 17063530 17063562 -128525726 + AT_rich Low_complexity Low_complexity 1 32 0 23 33 0 0 chr10 17064316 17064346 -128524942 + AT_rich Low_complexity Low_complexity 1 30 0 214 278 35 26 chr10 17065724 17065839 -128523449 + C-rich Low_complexity Low_complexity 4 119 0 26 0 0 0 chr10 17066101 17066127 -128523161 + GC_rich Low_complexity Low_complexity 1 26 0 24 77 0 0 chr10 17066692 17066744 -128522544 + GC_rich Low_complexity Low_complexity 1 52 0 27 73 0 0 chr10 17067051 17067106 -128522182 + GC_rich Low_complexity Low_complexity 1 55 0 189 0 0 0 chr10 17068626 17068647 -128520641 + (TTTC)n Simple_repeat Simple_repeat 3 23 0 644 307 69 5 chr10 17070670 17070888 -128518400 + MIR SINE MIR 29 260 -2 1897 139 6 52 chr10 17071413 17071737 -128517551 - AluSx SINE Alu -3 309 1 375 159 0 40 chr10 17073599 17073819 -128515469 + AluJo SINE Alu 1 292 -10 1488 191 10 48 chr10 17074386 17074695 -128514593 - AluJo SINE Alu -13 299 3 21 0 0 0 chr10 17075588 17075609 -128513679 + AT_rich Low_complexity Low_complexity 1 21 0 1514 185 36 45 chr10 17077287 17077595 -128511693 + AluJb SINE Alu 2 306 -6 1076 90 0 0 chr10 17077853 17077986 -128511302 + AluSq/x SINE Alu 1 133 -180 2180 132 7 0 chr10 17077989 17078332 -128510956 + AluSx SINE Alu 1 345 0 2181 99 7 3 chr10 17078685 17078978 -128510310 - AluSc SINE Alu -15 294 1 2358 109 0 0 chr10 17079967 17080278 -128509010 + AluSx SINE Alu 1 311 -1 886 189 19 61 chr10 17080557 17080728 -128508560 + MER3 DNA MER1_type 7 169 -40 2199 116 0 3 chr10 17080728 17081022 -128508266 + AluSx SINE Alu 1 293 -19 886 189 19 61 chr10 17081022 17081062 -128508226 + MER3 DNA MER1_type 169 209 0 183 208 0 38 chr10 17081089 17081142 -128508146 + L3b LINE CR1 1303 1353 -230 1710 165 84 14 chr10 17081247 17081604 -128507684 - MLT1B LTR MaLR -8 382 1 285 29 0 0 chr10 17082431 17082465 -128506823 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 722 133 106 0 chr10 17082465 17082578 -128506710 - FLAM_C SINE Alu -17 126 2 225 333 83 0 chr10 17082586 17082694 -128506594 + L2 LINE L2 3011 3127 -186 1472 166 85 30 chr10 17082696 17082991 -128506297 + MLT1B LTR MaLR 1 311 -79 203 156 44 0 chr10 17083015 17083060 -128506228 + T-rich Low_complexity Low_complexity 2 48 0 1466 135 11 135 chr10 17083227 17083496 -128505792 + MLT1B LTR MaLR 85 303 -87 1826 172 3 10 chr10 17083496 17083798 -128505490 - AluSx SINE Alu -8 304 5 1466 135 11 135 chr10 17083798 17083877 -128505411 + MLT1B LTR MaLR 303 390 0 359 274 71 0 chr10 17083917 17084030 -128505258 + L2 LINE L2 3174 3294 -19 191 313 15 0 chr10 17084420 17084487 -128504801 + L2 LINE L2 3244 3311 -2 224 177 32 0 chr10 17085007 17085069 -128504219 + A-rich Low_complexity Low_complexity 5 68 0 429 20 0 0 chr10 17085486 17085536 -128503752 + (TG)n Simple_repeat Simple_repeat 2 51 0 192 254 90 0 chr10 17085673 17085740 -128503548 - L2 LINE L2 -678 2636 2564 209 285 77 29 chr10 17085898 17086069 -128503219 - L2 LINE L2 -333 2980 2793 1002 153 44 57 chr10 17086140 17086152 -128503136 - L1MC2 LINE L1 -1 6343 6332 2113 118 7 0 chr10 17086152 17086448 -128502840 + AluSx SINE Alu 1 298 -14 1002 153 44 57 chr10 17086448 17086663 -128502625 - L1MC2 LINE L1 -12 6332 6119 1556 156 31 116 chr10 17086749 17087173 -128502115 + MLT1B LTR MaLR 1 388 -2 504 165 0 0 chr10 17087211 17087290 -128501998 + AluJ/FLAM SINE Alu 2 80 -232 1574 179 7 21 chr10 17087291 17087576 -128501712 - AluJo SINE Alu -31 281 1 1772 137 108 17 chr10 17087836 17088180 -128501108 + THE1C LTR MaLR 1 375 0 2140 111 0 27 chr10 17089091 17089388 -128499900 - AluSx SINE Alu -23 289 1 207 0 0 0 chr10 17089887 17089910 -128499378 + (A)n Simple_repeat Simple_repeat 1 23 0 2081 72 0 4 chr10 17091312 17091563 -128497725 + AluSc SINE Alu 41 290 -19 2389 155 62 0 chr10 17091787 17092188 -128497100 + MSTB LTR MaLR 1 426 0 594 272 53 0 chr10 17092460 17092629 -128496659 - MIR SINE MIR -32 230 53 180 0 0 0 chr10 17092681 17092701 -128496587 + (TGGGGG)n Simple_repeat Simple_repeat 1 20 0 2665 114 48 29 chr10 17092777 17093125 -128496163 + MSTA LTR MaLR 1 360 -68 2475 72 9 9 chr10 17093125 17093459 -128495829 - L1PA8 LINE L1 0 6172 5839 2665 114 48 29 chr10 17093459 17093530 -128495758 + MSTA LTR MaLR 360 428 0 1033 216 32 5 chr10 17093531 17093749 -128495539 - MER58A DNA MER1_type 0 224 1 1487 151 76 31 chr10 17095331 17095648 -128493640 + THE1C LTR MaLR 1 331 -44 1439 179 4 0 chr10 17095648 17095882 -128493406 - AluSq SINE Alu -78 235 1 265 146 0 0 chr10 17095882 17095923 -128493365 + THE1C LTR MaLR 388 428 0 2418 110 0 0 chr10 17096353 17096661 -128492627 + AluSx SINE Alu 1 308 -4 2202 90 7 20 chr10 17096746 17097046 -128492242 - AluY SINE Alu -15 296 1 454 116 0 197 chr10 17098128 17098209 -128491079 + MER63 DNA MER1_type 600 641 -419 2167 112 21 0 chr10 17098209 17098494 -128490794 + AluSx SINE Alu 1 291 -21 454 116 0 197 chr10 17098494 17098559 -128490729 + MER63 DNA MER1_type 641 717 -343 771 229 78 23 chr10 17098850 17099068 -128490220 + MER63C DNA MER1_type 169 398 -532 2530 122 5 0 chr10 17099068 17099437 -128489851 - L1PB1 LINE L1 0 6151 5781 2057 134 0 13 chr10 17099465 17099764 -128489524 + AluSc SINE Alu 8 302 -7 988 191 0 0 chr10 17099772 17099934 -128489354 + FRAM SINE Alu 1 161 -15 361 207 99 9 chr10 17099946 17100057 -128489231 + L1MC5 LINE L1 6738 6858 -1103 718 125 0 10 chr10 17100058 17100162 -128489126 + FLAM_C SINE Alu 17 119 -24 717 130 0 7 chr10 17100162 17100291 -128488997 - L1M2 LINE L1 -386 5780 5656 2125 124 0 3 chr10 17100320 17100611 -128488677 + AluSq SINE Alu 1 290 -23 214 359 88 19 chr10 17100664 17100823 -128488465 - L2 LINE L2 -908 2406 2237 2155 56 0 4 chr10 17101513 17101782 -128487506 + L1PA10 LINE L1 5712 5979 -189 206 380 28 42 chr10 17102050 17102192 -128487096 + MIR3 SINE MIR 16 155 -53 285 350 81 0 chr10 17102831 17102954 -128486334 - MIR3 SINE MIR -3 205 73 199 321 7 102 chr10 17102968 17103105 -128486183 + L2 LINE L2 2930 3053 -219 644 298 13 14 chr10 17103188 17103373 -128485915 - MIR SINE MIR -62 146 2 215 287 111 50 chr10 17103379 17103560 -128485728 + L2 LINE L2 3105 3296 -17 2144 125 0 0 chr10 17103598 17103893 -128485395 + AluSx SINE Alu 1 295 -17 234 0 0 0 chr10 17104330 17104356 -128484932 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1996 140 0 34 chr10 17104358 17104680 -128484608 - AluSx SINE Alu -1 311 1 527 65 0 0 chr10 17104827 17104889 -128484399 - Alu SINE Alu -255 63 2 689 252 73 32 chr10 17105962 17106141 -128483147 + MIR SINE MIR 28 219 -43 2221 134 0 3 chr10 17106141 17106454 -128482834 + AluSx SINE Alu 1 312 0 689 252 73 32 chr10 17106454 17106492 -128482796 + MIR SINE MIR 219 254 -8 297 333 94 22 chr10 17106678 17106858 -128482430 - MIR3 SINE MIR -9 199 7 798 288 72 104 chr10 17109390 17110056 -128479232 + L1ME4a LINE L1 28 713 -5406 393 22 0 0 chr10 17110056 17110102 -128479186 + (CA)n Simple_repeat Simple_repeat 2 47 0 798 288 72 104 chr10 17110102 17110438 -128478850 + L1ME4a LINE L1 713 992 -5127 1959 152 3 7 chr10 17110438 17110740 -128478548 + AluSx SINE Alu 1 301 -11 798 288 72 104 chr10 17110740 17110882 -128478406 + L1ME4a LINE L1 992 1137 -4982 2235 222 48 54 chr10 17110910 17111428 -128477860 - LTR40a LTR ERVL -1 518 4 528 268 42 84 chr10 17111605 17112509 -128476779 + L1ME4a LINE L1 4608 5260 -869 2168 125 0 0 chr10 17112640 17112944 -128476344 - AluSx SINE Alu -8 304 1 2182 111 10 0 chr10 17113377 17113675 -128475613 - AluSx SINE Alu -11 301 1 299 316 18 6 chr10 17114941 17115112 -128474176 + L1ME4a LINE L1 5693 5865 -239 727 214 146 10 chr10 17115438 17115630 -128473658 - Tigger1 DNA MER2_type 0 2418 2201 539 182 250 20 chr10 17115597 17115745 -128473543 - Tigger1 DNA MER2_type -2236 182 1 * 310 355 138 5 chr10 17115846 17116063 -128473225 - MIR SINE MIR -4 258 13 1503 177 37 27 chr10 17116310 17116609 -128472679 - AluJo SINE Alu -10 302 1 806 192 23 17 chr10 17116685 17116857 -128472431 - AluSg/x SINE Alu 0 312 140 750 133 88 9 chr10 17117411 17117524 -128471764 + AluSq/x SINE Alu 5 126 -186 2313 92 0 3 chr10 17117527 17117822 -128471466 + AluSc SINE Alu 3 296 -13 2693 130 8 0 chr10 17117824 17118209 -128471079 - MER75 DNA T2_type -126 388 1 260 300 86 7 chr10 17118253 17118393 -128470895 + HAL1b LINE L1 506 656 -692 949 126 0 0 chr10 17118441 17118576 -128470712 + AluJb SINE Alu 1 135 -177 779 259 30 22 chr10 17118577 17118847 -128470441 + HAL1b LINE L1 663 934 -414 * 785 183 46 11 chr10 17118846 17119021 -128470267 - L1M4 LINE L1 -833 5313 5133 1124 235 34 47 chr10 17119034 17119421 -128469867 + L1ME1 LINE L1 5724 6105 -61 378 286 25 12 chr10 17119328 17119489 -128469799 + L1MA10 LINE L1 6169 6331 -3 * 2154 118 16 3 chr10 17119537 17119842 -128469446 - AluSq SINE Alu -4 309 1 765 148 17 0 chr10 17120194 17120309 -128468979 - AluSq/x SINE Alu -183 130 14 484 90 0 0 chr10 17120321 17120388 -128468900 - AluJo SINE Alu -5 307 241 898 183 17 51 chr10 17120389 17120564 -128468724 - AluJo SINE Alu -142 170 2 238 212 48 7 chr10 17120580 17120726 -128468562 + (TATATG)n Simple_repeat Simple_repeat 4 155 0 201 94 0 0 chr10 17121551 17121583 -128467705 + (GA)n Simple_repeat Simple_repeat 2 33 0 372 277 13 3 chr10 17121702 17122010 -128467278 + GA-rich Low_complexity Low_complexity 1 311 0 827 223 135 61 chr10 17122587 17122692 -128466596 + L1ME1 LINE L1 5146 5242 -924 1860 141 0 78 chr10 17122692 17123025 -128466263 - AluSx SINE Alu -5 307 1 827 223 135 61 chr10 17123025 17123366 -128465922 + L1ME1 LINE L1 5242 5617 -549 1836 184 15 26 chr10 17123374 17123530 -128465758 + MER1B DNA MER1_type 1 157 -2555 1882 114 0 18 chr10 17123530 17123802 -128465486 - AluSq SINE Alu 0 313 47 1836 184 15 26 chr10 17123802 17123988 -128465300 + MER1B DNA MER1_type 157 339 0 1636 241 71 31 chr10 17123988 17124511 -128464777 + L1ME1 LINE L1 5619 6162 -4 2055 123 27 0 chr10 17125417 17125718 -128463570 - AluSg SINE Alu -1 309 1 575 286 91 20 chr10 17125991 17126190 -128463098 - MIR SINE MIR -21 241 29 2135 115 31 0 chr10 17126330 17126651 -128462637 + L1MA2 LINE L1 5963 6293 -11 1152 102 0 0 chr10 17126893 17127050 -128462238 + AluSg/x SINE Alu 152 308 -2 362 275 132 25 chr10 17127118 17127502 -128461786 + L1MC4a LINE L1 5591 6012 -109 1601 175 14 27 chr10 17127624 17127916 -128461372 + AluJb SINE Alu 1 288 -24 2055 125 4 0 chr10 17127943 17128245 -128461043 + AluSx SINE Alu 1 303 0 1012 146 6 6 chr10 17128328 17128486 -128460802 - L1PB3 LINE L1 -1 6153 5996 304 255 71 21 chr10 17128501 17128642 -128460646 + L1ME4a LINE L1 5969 6116 -5 555 280 77 6 chr10 17128889 17129057 -128460231 - MLT1L LTR MaLR -5 610 431 227 380 92 30 chr10 17129233 17129601 -128459687 - L2 LINE L2 -629 2685 2295 1138 101 0 6 chr10 17129601 17129760 -128459528 + AluSg/x SINE Alu 154 311 -1 197 396 22 36 chr10 17130329 17130468 -128458820 + MIR3 SINE MIR 5 141 -67 922 248 102 8 chr10 17130643 17130897 -128458391 - MLT1L LTR MaLR 0 615 338 233 281 73 12 chr10 17130910 17130992 -128458296 + MIR SINE MIR 176 262 0 1417 184 21 115 chr10 17131037 17131069 -128458219 - MLT1B LTR MaLR 0 390 357 2379 115 81 0 chr10 17131069 17131416 -128457872 + THE1C LTR MaLR 1 375 0 1417 184 21 115 chr10 17131416 17131808 -128457480 - MLT1B LTR MaLR -33 357 6 268 247 12 0 chr10 17134936 17135017 -128454271 + L1MC4 LINE L1 6622 6703 -1339 892 185 0 0 chr10 17135044 17135201 -128454087 + AluJb SINE Alu 152 308 -4 370 301 23 74 chr10 17135287 17135463 -128453825 + MIR3 SINE MIR 39 205 -3 258 241 46 11 chr10 17136239 17136326 -128452962 + L2 LINE L2 2667 2756 -558 400 267 17 33 chr10 17136342 17136462 -128452826 + L2 LINE L2 3195 3312 -1 401 304 118 72 chr10 17136487 17136852 -128452436 + L2 LINE L2 2851 3240 -73 2840 97 68 0 chr10 17136852 17137263 -128452025 + L1PA13 LINE L1 5725 6163 0 401 304 118 72 chr10 17137263 17137328 -128451960 + L2 LINE L2 3240 3301 -12 2116 115 0 3 chr10 17137345 17137631 -128451657 + AluSg SINE Alu 1 285 -25 405 0 0 0 chr10 17137632 17137677 -128451611 + (TG)n Simple_repeat Simple_repeat 2 46 0 1830 167 0 0 chr10 17138323 17138622 -128450666 - AluSx SINE Alu -13 299 1 608 248 25 71 chr10 17138883 17139165 -128450123 - MLT1C LTR MaLR 0 467 199 1318 111 6 0 chr10 17139408 17139588 -128449700 + AluSp SINE Alu 125 305 -8 2205 123 3 0 chr10 17140147 17140448 -128448840 + AluSx SINE Alu 1 302 -10 255 137 98 0 chr10 17140505 17140556 -128448732 + L2 LINE L2 3217 3272 0 1699 154 32 4 chr10 17141023 17141302 -128447986 - AluJo SINE Alu -25 287 1 2601 43 0 3 chr10 17141641 17141946 -128447342 - AluY SINE Alu -7 304 1 350 283 83 14 chr10 17142053 17142198 -128447090 + MIR SINE MIR 100 254 -8 693 248 78 59 chr10 17142393 17142839 -128446449 + MLT1E LTR MaLR 2 537 -30 250 245 21 64 chr10 17142936 17143030 -128446258 + MIR SINE MIR 118 207 -55 2173 118 30 3 chr10 17143114 17143418 -128445870 - AluSx SINE Alu 0 312 1 398 304 63 47 chr10 17143427 17143789 -128445499 + L1ME2 LINE L1 5585 5952 -212 248 219 86 29 chr10 17144129 17144234 -128445054 + L1ME LINE L1 5643 5753 -368 1223 185 163 135 chr10 17144417 17144525 -128444763 + LTR1B LTR ERV1 82 186 -640 369 0 0 0 chr10 17144525 17144566 -128444722 + (CA)n Simple_repeat Simple_repeat 2 42 0 1223 185 163 135 chr10 17144566 17145182 -128444106 + LTR1B LTR ERV1 186 826 0 355 265 110 68 chr10 17145416 17145635 -128443653 + MLT1L LTR MaLR 214 441 -174 26 0 0 0 chr10 17146244 17146270 -128443018 + AT_rich Low_complexity Low_complexity 1 26 0 210 37 0 0 chr10 17146625 17146652 -128442636 + (TG)n Simple_repeat Simple_repeat 2 28 0 758 289 24 0 chr10 17146744 17146952 -128442336 + MIR SINE MIR 46 258 -4 3772 167 106 13 chr10 17148402 17149158 -128440130 + LTR1B LTR ERV1 1 826 0 352 244 98 12 chr10 17149603 17149767 -128439521 + AluJb SINE Alu 105 282 -20 457 279 111 44 chr10 17149867 17150301 -128438987 - L2 LINE L2 -1022 2292 1830 31 0 0 0 chr10 17151393 17151424 -128437864 + AT_rich Low_complexity Low_complexity 1 31 0 2256 93 0 35 chr10 17151630 17151940 -128437348 - AluSq SINE Alu -14 299 1 2292 103 0 0 chr10 17152570 17152862 -128436426 + AluSc SINE Alu 1 292 -17 855 201 5 0 chr10 17154170 17154558 -128434730 + CT-rich Low_complexity Low_complexity 1 390 0 2118 141 0 0 chr10 17155471 17155762 -128433526 + AluSx SINE Alu 6 296 -16 237 287 50 0 chr10 17156260 17156361 -128432927 + MIR SINE MIR 38 143 -119 25 31 0 0 chr10 17156625 17156657 -128432631 + AT_rich Low_complexity Low_complexity 1 32 0 202 338 38 45 chr10 17156922 17157055 -128432233 - L2 LINE L2 -604 2710 2579 216 344 33 17 chr10 17157201 17157381 -128431907 - L2 LINE L2 -899 2415 2233 541 154 0 0 chr10 17157506 17157584 -128431704 - AluJ/FLAM SINE Alu -233 79 2 2995 151 0 8 chr10 17158340 17158824 -128430464 - L1PA15 LINE L1 -3 6162 5683 346 294 108 5 chr10 17158931 17159125 -128430163 - MIR SINE MIR -1 261 48 1618 83 208 0 chr10 17159290 17159531 -128429757 - AluSg1 SINE Alu -18 291 1 2676 140 4 42 chr10 17159533 17159984 -128429304 + Tigger2a DNA MER2_type 1 434 0 2393 104 0 0 chr10 17160482 17160790 -128428498 - AluSc SINE Alu -1 308 1 1669 184 3 10 chr10 17160824 17161123 -128428165 - AluJb SINE Alu -5 307 11 520 258 65 70 chr10 17161133 17161850 -128427438 - L1MEd LINE L1 -4325 2216 1229 4233 176 70 4 chr10 17162007 17162780 -128426508 + LTR1B LTR ERV1 1 824 -2 9375 91 5 2 chr10 17163637 17165713 -128423575 + L1PA7 LINE L1 4073 6152 -2 292 318 27 27 chr10 17167978 17168126 -128421162 + MIR SINE MIR 45 192 -70 533 226 24 8 chr10 17168204 17168328 -128420960 - L2 LINE L2 -1 3312 3187 261 182 31 75 chr10 17168467 17168701 -128420587 + (TTATA)n Simple_repeat Simple_repeat 1 223 0 238 250 48 12 chr10 17168631 17168799 -128420489 + (TA)n Simple_repeat Simple_repeat 2 175 0 * 276 350 102 0 chr10 17170437 17170623 -128418665 - MIR SINE MIR -54 208 4 186 43 0 0 chr10 17170813 17170836 -128418452 + (T)n Simple_repeat Simple_repeat 1 23 0 5712 51 0 0 chr10 17170904 17171592 -128417696 + L1PA5 LINE L1 5467 6154 0 1032 81 0 22 chr10 17172857 17172993 -128416295 - AluSq/x SINE Alu -180 133 1 493 59 0 2 chr10 17173235 17173298 -128415990 + L1PA5 LINE L1 6056 6135 -28 2148 135 0 3 chr10 17173996 17174299 -128414989 + AluSx SINE Alu 1 302 -10 182 329 155 12 chr10 17174511 17174672 -128414616 + MIR SINE MIR 76 259 -3 796 143 30 30 chr10 17174685 17174818 -128414470 - FLAM_C SINE Alu 0 133 1 21 36 0 0 chr10 17175007 17175035 -128414253 + AT_rich Low_complexity Low_complexity 1 28 0 220 292 65 38 chr10 17175038 17175202 -128414086 - MIR SINE MIR -61 201 34 2235 108 0 3 chr10 17176344 17176640 -128412648 + AluSc SINE Alu 1 295 -14 1727 214 55 9 chr10 17177342 17177781 -128411507 + MLT1C LTR MaLR 6 464 -3 276 326 21 57 chr10 17179915 17180056 -128409232 + MIR SINE MIR 48 183 -79 4936 95 1 36 chr10 17180066 17180779 -128408509 - LTR12 LTR ERV1 0 688 1 329 348 59 24 chr10 17183522 17183861 -128405427 + L2 LINE L2 2185 2535 -779 1943 134 39 0 chr10 17183865 17184148 -128405140 - AluSg SINE Alu -16 294 1 797 205 62 22 chr10 17184431 17184655 -128404633 - MER106A DNA MER1_type -1 235 3 296 359 16 47 chr10 17184683 17184875 -128404413 + L2 LINE L2 2914 3099 -173 2170 132 35 51 chr10 17184966 17185361 -128403927 + MLT1B LTR MaLR 1 389 -1 1593 196 18 0 chr10 17187070 17187351 -128401937 + AluJb SINE Alu 7 292 -20 298 0 48 0 chr10 17187422 17187464 -128401824 + (TG)n Simple_repeat Simple_repeat 2 45 0 257 0 30 0 chr10 17187526 17187559 -128401729 + (TG)n Simple_repeat Simple_repeat 2 35 0 333 0 0 0 chr10 17187620 17187657 -128401631 + (TG)n Simple_repeat Simple_repeat 1 37 0 545 305 47 60 chr10 17187739 17188119 -128401169 + L2 LINE L2 2898 3272 0 562 262 12 24 chr10 17188799 17188967 -128400321 + MER5B DNA MER1_type 8 173 -5 423 193 23 0 chr10 17189192 17189280 -128400008 + MER5A DNA MER1_type 4 93 -96 1652 201 7 0 chr10 17189551 17189859 -128399429 + AluJo SINE Alu 1 310 0 5531 70 113 0 chr10 17190380 17191122 -128398166 - LTR12 LTR ERV1 0 826 1 4733 93 1 15 chr10 17191122 17191775 -128397513 - HERV9 LTR ERV1 0 8399 7756 2092 176 92 78 chr10 17191769 17192694 -128396594 - Harlequin LTR ERV1 -5176 1720 842 * 35816 88 30 5 chr10 17192689 17197467 -128391821 - Harlequin LTR ERV1 -3445 4954 58 4694 68 224 0 chr10 17197491 17198166 -128391122 - LTR12 LTR ERV1 0 826 1 866 180 87 0 chr10 17198166 17198338 -128390950 - MER5A DNA MER1_type -2 187 1 900 92 0 0 chr10 17199555 17199675 -128389613 - L1MA2 LINE L1 0 6304 6185 480 300 78 40 chr10 17200052 17200399 -128388889 - L1ME LINE L1 -460 5661 5302 295 143 0 0 chr10 17202053 17202095 -128387193 + LTR7 LTR ERV1 1 42 -408 1899 151 6 22 chr10 17203684 17203996 -128385292 - AluJb SINE Alu -5 307 1 484 370 19 0 chr10 17204552 17204760 -128384528 + MIR SINE MIR 33 244 -18 2089 118 10 7 chr10 17205541 17205845 -128383443 + AluSx SINE Alu 1 305 -7 288 286 166 29 chr10 17206375 17206683 -128382605 + L1ME4a LINE L1 5661 6010 -111 22 30 0 61 chr10 17207048 17207096 -128382192 + AT_rich Low_complexity Low_complexity 1 46 -16 632 103 10 0 chr10 17207096 17207193 -128382095 + L1MA2 LINE L1 6207 6304 0 22 30 0 61 chr10 17207193 17207210 -128382078 + AT_rich Low_complexity Low_complexity 46 62 0 360 0 0 0 chr10 17207417 17207457 -128381831 + (TTA)n Simple_repeat Simple_repeat 3 42 0 2122 132 0 0 chr10 17207633 17207944 -128381344 + AluSx SINE Alu 2 312 0 2582 117 10 18 chr10 17209168 17209554 -128379734 + MER1A DNA MER1_type 147 529 0 364 266 166 0 chr10 17209606 17209745 -128379543 - MIR SINE MIR -4 258 97 2113 117 0 0 chr10 17209830 17210135 -128379153 + AluSx SINE Alu 1 305 0 581 228 169 22 chr10 17210516 17210700 -128378588 - MIR SINE MIR 0 262 52 411 246 140 3 chr10 17211483 17211611 -128377677 - MIR SINE MIR -62 146 12 220 287 180 43 chr10 17212075 17212448 -128376840 + L2 LINE L2 2465 2888 -426 315 243 88 88 chr10 17213734 17213870 -128375418 - MER5B DNA MER1_type -36 153 4 401 267 168 89 chr10 17214174 17214792 -128374496 + L1M2 LINE L1 527 1193 -5656 234 116 0 0 chr10 17215129 17215172 -128374116 + (G)n Simple_repeat Simple_repeat 1 43 0 14524 150 72 8 chr10 17215184 17220721 -128368567 - L1P5 LINE L1 -360 6507 625 1134 172 0 5 chr10 17220713 17220911 -128368377 - L1P5 LINE L1 -6663 200 4 * 845 230 36 0 chr10 17220936 17221132 -128368156 + MER63 DNA MER1_type 516 718 -343 236 294 0 43 chr10 17221159 17221251 -128368037 + L2 LINE L2 3190 3277 -36 217 319 118 7 chr10 17221625 17221769 -128367519 + L2 LINE L2 3003 3162 -151 346 240 103 55 chr10 17221785 17221931 -128367357 + L2 LINE L2 3113 3265 -48 331 266 106 0 chr10 17221952 17222046 -128367242 - L2 LINE L2 -19 3294 3191 2750 118 25 35 chr10 17222374 17222763 -128366525 + MSTA LTR MaLR 1 387 -41 1698 174 3 23 chr10 17222763 17223067 -128366221 - AluSg SINE Alu -12 298 1 2750 118 25 35 chr10 17223067 17223109 -128366179 + MSTA LTR MaLR 387 428 0 898 75 42 0 chr10 17223119 17223239 -128366049 - MER75 DNA T2_type 0 514 390 780 134 89 0 chr10 17223247 17223359 -128365929 + AluSq/x SINE Alu 5 126 -187 2313 92 0 3 chr10 17223362 17223657 -128365631 + AluSc SINE Alu 3 296 -13 2693 130 8 0 chr10 17223659 17224044 -128365244 - MER75 DNA T2_type -126 388 1 260 300 86 7 chr10 17224088 17224228 -128365060 + HAL1b LINE L1 506 656 -692 949 126 0 0 chr10 17224276 17224411 -128364877 + AluJb SINE Alu 1 135 -177 779 259 30 22 chr10 17224412 17224682 -128364606 + HAL1b LINE L1 663 934 -414 * 785 183 46 11 chr10 17224681 17224856 -128364432 - L1M4 LINE L1 -833 5313 5133 1124 235 34 47 chr10 17224869 17225256 -128364032 + L1ME1 LINE L1 5724 6105 -61 378 286 25 12 chr10 17225163 17225324 -128363964 + L1MA10 LINE L1 6169 6331 -3 * 2154 118 16 3 chr10 17225372 17225677 -128363611 - AluSq SINE Alu -4 309 1 802 150 17 0 chr10 17226028 17226148 -128363140 - AluSq/x SINE Alu -183 130 9 502 73 0 0 chr10 17226156 17226224 -128363064 - AluJo SINE Alu -4 308 241 898 183 17 51 chr10 17226225 17226400 -128362888 - AluJo SINE Alu -142 170 2 238 212 48 7 chr10 17226416 17226562 -128362726 + (TATATG)n Simple_repeat Simple_repeat 4 155 0 201 94 0 0 chr10 17227387 17227419 -128361869 + (GA)n Simple_repeat Simple_repeat 2 33 0 394 279 13 3 chr10 17227538 17227846 -128361442 + GA-rich Low_complexity Low_complexity 1 311 0 827 230 138 42 chr10 17228423 17228519 -128360769 + L1ME1 LINE L1 5146 5231 -935 1877 142 0 77 chr10 17228519 17228857 -128360431 - AluSx SINE Alu 0 312 1 827 230 138 42 chr10 17228857 17229198 -128360090 + L1ME1 LINE L1 5231 5617 -549 1836 184 15 26 chr10 17229206 17229362 -128359926 + MER1B DNA MER1_type 1 157 -2555 1882 114 0 18 chr10 17229362 17229634 -128359654 - AluSq SINE Alu 0 313 47 1836 184 15 26 chr10 17229634 17229820 -128359468 + MER1B DNA MER1_type 157 339 0 1636 241 71 31 chr10 17229820 17230343 -128358945 + L1ME1 LINE L1 5619 6162 -4 2055 123 27 0 chr10 17231249 17231550 -128357738 - AluSg SINE Alu -1 309 1 575 286 91 20 chr10 17231823 17232022 -128357266 - MIR SINE MIR -21 241 29 2135 115 31 0 chr10 17232162 17232483 -128356805 + L1MA2 LINE L1 5963 6293 -11 1152 102 0 0 chr10 17232725 17232882 -128356406 + AluSg/x SINE Alu 154 310 -2 362 275 132 25 chr10 17232950 17233334 -128355954 + L1MC4a LINE L1 5591 6012 -109 1601 175 14 27 chr10 17233456 17233748 -128355540 + AluJb SINE Alu 1 288 -24 2055 125 4 0 chr10 17233775 17234077 -128355211 + AluSx SINE Alu 1 303 0 1012 146 6 6 chr10 17234160 17234318 -128354970 - L1PB3 LINE L1 -1 6153 5996 304 255 71 21 chr10 17234333 17234474 -128354814 + L1ME4a LINE L1 5969 6116 -5 555 280 77 6 chr10 17234721 17234889 -128354399 - MLT1L LTR MaLR -5 610 431 227 380 92 30 chr10 17235065 17235433 -128353855 - L2 LINE L2 -629 2685 2295 1138 101 0 6 chr10 17235433 17235592 -128353696 + AluSg/x SINE Alu 154 311 -1 197 396 22 36 chr10 17236161 17236300 -128352988 + MIR3 SINE MIR 5 141 -67 922 248 102 8 chr10 17236475 17236729 -128352559 - MLT1L LTR MaLR 0 615 338 233 281 73 12 chr10 17236742 17236824 -128352464 + MIR SINE MIR 176 262 0 1417 184 21 115 chr10 17236869 17236901 -128352387 - MLT1B LTR MaLR 0 390 357 2379 115 81 0 chr10 17236901 17237248 -128352040 + THE1C LTR MaLR 1 375 0 1417 184 21 115 chr10 17237248 17237640 -128351648 - MLT1B LTR MaLR -33 357 6 268 247 12 0 chr10 17240768 17240849 -128348439 + L1MC4 LINE L1 6622 6703 -1339 892 185 0 0 chr10 17240876 17241033 -128348255 + AluJb SINE Alu 152 308 -4 370 301 23 74 chr10 17241119 17241295 -128347993 + MIR3 SINE MIR 39 205 -3 258 241 46 11 chr10 17242071 17242158 -128347130 + L2 LINE L2 2667 2756 -558 400 267 17 33 chr10 17242174 17242294 -128346994 + L2 LINE L2 3195 3312 -1 401 304 118 72 chr10 17242319 17242684 -128346604 + L2 LINE L2 2851 3240 -73 2840 97 68 0 chr10 17242684 17243095 -128346193 + L1PA13 LINE L1 5725 6163 0 401 304 118 72 chr10 17243095 17243160 -128346128 + L2 LINE L2 3240 3301 -12 2116 115 0 3 chr10 17243177 17243463 -128345825 + AluSg SINE Alu 1 285 -25 405 0 0 0 chr10 17243464 17243509 -128345779 + (TG)n Simple_repeat Simple_repeat 2 46 0 1830 167 0 0 chr10 17244155 17244454 -128344834 - AluSx SINE Alu -13 299 1 1360 232 71 40 chr10 17244715 17245168 -128344120 - MLT1C LTR MaLR 0 467 1 868 149 0 0 chr10 17245277 17245418 -128343870 - AluJo SINE Alu 0 312 172 978 135 5 125 chr10 17245629 17245703 -128343585 - AluJo SINE Alu -136 176 95 2054 133 0 13 chr10 17245703 17246011 -128343277 + AluSx SINE Alu 9 312 0 978 135 5 125 chr10 17246011 17246136 -128343152 - AluJo SINE Alu -217 95 1 248 270 0 16 chr10 17247050 17247113 -128342175 + CT-rich Low_complexity Low_complexity 4 65 0 1452 189 40 17 chr10 17247114 17247415 -128341873 - AluJb SINE Alu -4 308 1 320 294 48 24 chr10 17247925 17248051 -128341237 + MIR SINE MIR 20 148 -114 363 263 0 12 chr10 17248856 17248936 -128340352 - L2 LINE L2 -8 3305 3227 798 212 13 93 chr10 17248937 17249054 -128340234 - MER58A DNA MER1_type -2202 218 128 1884 173 0 19 chr10 17249054 17249190 -128340098 + AluSx SINE Alu 1 138 -174 2512 53 30 0 chr10 17249190 17249492 -128339796 + AluY SINE Alu 1 311 0 1884 173 0 19 chr10 17249492 17249673 -128339615 + AluSx SINE Alu 138 312 0 798 212 13 93 chr10 17249673 17249791 -128339497 - MER58A DNA MER1_type -2292 128 2 343 340 75 11 chr10 17249817 17250005 -128339283 - L2 LINE L2 -203 3110 2911 447 325 81 27 chr10 17250021 17250319 -128338969 - L2 LINE L2 -517 2797 2484 2240 88 3 14 chr10 17251157 17251454 -128337834 + AluSx SINE Alu 1 294 -18 573 284 104 67 chr10 17251668 17251944 -128337344 - L1ME4a LINE L1 -4 6117 5853 2007 125 3 7 chr10 17251944 17252239 -128337049 - AluSx SINE Alu -18 294 1 573 284 104 67 chr10 17252239 17252546 -128336742 - L1ME4a LINE L1 -268 5853 5512 926 131 42 48 chr10 17255439 17255607 -128333681 - AluJo SINE Alu -14 298 132 22 35 0 0 chr10 17255607 17255636 -128333652 + AT_rich Low_complexity Low_complexity 1 29 0 351 57 51 68 chr10 17255640 17255817 -128333471 + (TA)n Simple_repeat Simple_repeat 1 174 0 2104 128 7 0 chr10 17255817 17256106 -128333182 - AluSx SINE Alu -17 295 5 704 167 25 0 chr10 17256120 17256240 -128333048 - AluJo SINE Alu -188 124 2 1840 124 0 8 chr10 17256749 17257008 -128332280 + AluSc SINE Alu 36 292 -17 460 226 165 0 chr10 17257207 17257322 -128331966 + MLT1K LTR MaLR 25 158 -347 1871 143 29 0 chr10 17257762 17258042 -128331246 - AluSx SINE Alu -24 288 1 304 226 16 158 chr10 17258440 17258573 -128330715 + MIR SINE MIR 34 147 -69 1699 212 118 15 chr10 17259093 17259284 -128330004 + MLT1D LTR MaLR 1 171 -334 1539 176 3 54 chr10 17259284 17259597 -128329691 + AluJo SINE Alu 1 297 -15 1699 212 118 15 chr10 17259597 17259863 -128329425 + MLT1D LTR MaLR 171 505 0 341 330 11 0 chr10 17260191 17260282 -128329006 - MER74A LTR ERVL -63 495 404 1734 147 19 42 chr10 17261582 17261889 -128327399 - AluJo SINE Alu -12 300 1 288 247 24 0 chr10 17263354 17263439 -128325849 - MIR SINE MIR -59 203 117 204 271 35 35 chr10 17265642 17265727 -128323561 - MIR SINE MIR -77 185 101 550 288 88 50 chr10 17265791 17266110 -128323178 + MLT1K LTR MaLR 152 482 -106 275 292 88 0 chr10 17266293 17266406 -128322882 + L2 LINE L2 3118 3240 -73 1081 126 31 2 chr10 17266831 17267060 -128322228 - AluJb SINE Alu -14 298 21 23 33 0 0 chr10 17267310 17267340 -128321948 + AT_rich Low_complexity Low_complexity 1 30 0 570 221 71 0 chr10 17267343 17267456 -128321832 - FLAM_A SINE Alu -12 121 1 2393 120 92 2 chr10 17268011 17268404 -128320884 + MSTA LTR MaLR 1 428 0 1358 164 125 8 chr10 17268902 17269158 -128320130 - AluSg1 SINE Alu -23 286 1 736 178 0 30 chr10 17269253 17269388 -128319900 + FLAM_C SINE Alu 1 131 -2 1462 178 27 51 chr10 17269882 17270175 -128319113 - AluJo SINE Alu -26 286 1 865 161 44 0 chr10 17270948 17271128 -128318160 - MER33 DNA MER1_type -1 323 136 446 239 9 15 chr10 17271180 17271315 -128317973 - MER33 DNA MER1_type -251 73 1 2192 149 2 11 chr10 17271433 17271877 -128317411 + MER1A DNA MER1_type 4 529 0 415 213 104 67 chr10 17272965 17273129 -128316159 + MIR SINE MIR 79 248 -14 1785 163 66 37 chr10 17275288 17275685 -128313603 + L1MA2 LINE L1 5897 6304 0 21976 105 22 6 chr10 17275886 17280031 -128309257 + L1PA8 LINE L1 1960 6169 -3 293 301 7 27 chr10 17281154 17281300 -128307988 + MIR SINE MIR 79 221 -41 2425 64 0 0 chr10 17281605 17281886 -128307402 + AluY SINE Alu 15 295 -16 737 190 103 77 chr10 17282142 17282337 -128306951 + MER20 DNA MER1_type 20 219 0 2809 90 0 6 chr10 17282528 17282894 -128306394 - THE1B LTR MaLR 0 364 1 827 123 0 0 chr10 17283026 17283148 -128306140 + L1MA1 LINE L1 6181 6302 0 4762 135 29 8 chr10 17284053 17284836 -128304452 - L1PA16 LINE L1 0 6166 5367 294 233 123 0 chr10 17286640 17286713 -128302575 - MER94 DNA DNA -52 82 1 1766 175 3 22 chr10 17287064 17287378 -128301910 - AluJb SINE Alu -4 308 1 503 170 226 0 chr10 17287384 17287490 -128301798 - FLAM_C SINE Alu -10 133 4 393 280 54 42 chr10 17287591 17287759 -128301529 + MIR SINE MIR 3 172 -90 1459 297 91 10 chr10 17287779 17288462 -128300826 + MER20B DNA MER1_type 42 779 -4 2229 105 6 16 chr10 17288499 17288813 -128300475 + AluSq SINE Alu 1 311 -2 543 203 152 6 chr10 17290154 17290312 -128298976 - MER5A DNA MER1_type -5 184 4 863 130 7 22 chr10 17291097 17291235 -128298053 - FLAM_C SINE Alu -7 136 1 1624 172 26 30 chr10 17293684 17293987 -128295301 + AluJb SINE Alu 1 302 -10 887 211 22 0 chr10 17294050 17294235 -128295053 - MER20 DNA MER1_type -1 218 30 411 298 35 7 chr10 17294634 17294775 -128294513 + L3 LINE CR1 1425 1569 -8 272 269 87 0 chr10 17295729 17295833 -128293455 - MIR3 SINE MIR -7 201 89 757 222 148 14 chr10 17295995 17296211 -128293077 + L1ME LINE L1 5559 5803 -361 2521 296 120 17 chr10 17296319 17297731 -128291557 + L2 LINE L2 1277 2834 -480 367 267 337 0 chr10 17297760 17298048 -128291240 + L2 LINE L2 2929 3313 0 264 293 12 0 chr10 17299200 17299282 -128290006 - MER103 DNA DNA -1 165 83 260 218 0 36 chr10 17301143 17301198 -128288090 + polypurine Low_complexity Low_complexity 4 56 0 328 315 210 6 chr10 17301370 17301713 -128287575 + L2 LINE L2 2562 2974 -340 1058 101 13 0 chr10 17302055 17302204 -128287084 + L1PA10 LINE L1 6018 6168 0 1529 117 0 14 chr10 17302322 17302544 -128286744 + AluSg/x SINE Alu 84 302 -8 24 0 0 0 chr10 17304475 17304499 -128284789 + AT_rich Low_complexity Low_complexity 1 24 0 412 215 6 153 chr10 17304657 17304820 -128284468 + MIR SINE MIR 66 204 -58 1572 139 9 104 chr10 17304865 17305181 -128284107 - MER2 DNA MER2_type -58 287 2 449 346 21 30 chr10 17305440 17305674 -128283614 - MIR SINE MIR -22 240 9 2216 101 7 0 chr10 17306555 17306852 -128282436 + AluSx SINE Alu 1 299 -13 253 273 23 0 chr10 17306900 17306988 -128282300 + L1MC4 LINE L1 6614 6703 -1339 323 311 0 0 chr10 17306996 17307086 -128282202 + L1MC4 LINE L1 6614 6703 -1339 276 30 0 0 chr10 17307090 17307123 -128282165 + (CA)n Simple_repeat Simple_repeat 2 34 0 418 132 22 15 chr10 17307792 17307881 -128281407 + L1P1 LINE L1 5374 5466 -689 1935 175 28 50 chr10 17307895 17308009 -128281279 + L1MB8 LINE L1 5419 5534 -644 2083 113 17 3 chr10 17308009 17308300 -128280988 - AluSc SINE Alu -14 295 1 1935 175 28 50 chr10 17308300 17308607 -128280681 + L1MB8 LINE L1 5534 5831 -347 1347 165 26 11 chr10 17308608 17308881 -128280407 + L1MB8 LINE L1 5902 6178 0 1651 173 0 53 chr10 17308970 17309293 -128279995 - AluJo SINE Alu -5 307 2 342 0 0 0 chr10 17309805 17309843 -128279445 + (TAAA)n Simple_repeat Simple_repeat 1 38 0 2396 82 0 7 chr10 17311605 17311909 -128277379 - AluY SINE Alu -9 302 1 180 0 0 0 chr10 17313421 17313441 -128275847 + (A)n Simple_repeat Simple_repeat 1 20 0 474 186 132 23 chr10 17313493 17313580 -128275708 + L1ME2 LINE L1 6022 6129 -35 183 42 0 0 chr10 17313580 17313604 -128275684 + (CA)n Simple_repeat Simple_repeat 2 25 0 474 186 132 23 chr10 17313604 17313645 -128275643 + L1ME2 LINE L1 6129 6164 0 1810 162 17 3 chr10 17313711 17314007 -128275281 - AluJb SINE Alu -12 300 1 266 290 90 10 chr10 17314269 17314369 -128274919 - MIR SINE MIR -102 160 53 2095 133 0 0 chr10 17315029 17315323 -128273965 - AluSq SINE Alu -11 302 9 2368 66 0 40 chr10 17315416 17315718 -128273570 + AluY SINE Alu 1 290 -21 1947 235 24 49 chr10 17315720 17316315 -128272973 + L1ME1 LINE L1 5597 6334 0 326 292 11 0 chr10 17316323 17316412 -128272876 - MIR SINE MIR -160 102 13 22 0 0 0 chr10 17317799 17317821 -128271467 + AT_rich Low_complexity Low_complexity 1 22 0 341 260 305 24 chr10 17317880 17318126 -128271162 - L2 LINE L2 -10 3303 2989 2090 112 0 3 chr10 17318171 17318457 -128270831 + AluSx SINE Alu 23 307 -5 1140 139 35 0 chr10 17318457 17318630 -128270658 + AluSg/x SINE Alu 134 312 0 267 261 54 9 chr10 17319237 17319348 -128269940 + L1MC3 LINE L1 6708 6823 -962 1173 167 50 14 chr10 17319559 17319571 -128269717 - MER46A DNA MER2_type -2495 236 226 2685 113 3 45 chr10 17319571 17319951 -128269337 - THE1B LTR MaLR 0 364 1 1173 167 50 14 chr10 17319951 17320159 -128269129 - MER46A DNA MER2_type -2505 226 8 454 188 101 54 chr10 17320040 17320189 -128269099 + MER46A DNA MER2_type 11 166 -70 * 14524 150 72 8 chr10 17320542 17326079 -128263209 - L1P5 LINE L1 -360 6507 625 1134 172 0 5 chr10 17326071 17326269 -128263019 - L1P5 LINE L1 -6663 200 4 * 845 230 36 0 chr10 17326294 17326490 -128262798 + MER63 DNA MER1_type 515 717 -343 236 294 0 43 chr10 17326517 17326609 -128262679 + L2 LINE L2 3190 3277 -36 217 319 118 7 chr10 17326983 17327127 -128262161 + L2 LINE L2 3003 3162 -151 346 240 103 55 chr10 17327143 17327289 -128261999 + L2 LINE L2 3113 3265 -48 331 266 106 0 chr10 17327310 17327404 -128261884 - L2 LINE L2 -19 3294 3191 2750 118 25 35 chr10 17327732 17328121 -128261167 + MSTA LTR MaLR 1 387 -41 1698 174 3 23 chr10 17328121 17328425 -128260863 - AluSg SINE Alu -12 298 1 2750 118 25 35 chr10 17328425 17328467 -128260821 + MSTA LTR MaLR 387 428 0 898 75 42 0 chr10 17328477 17328597 -128260691 - MER75 DNA T2_type 0 504 380 780 134 89 0 chr10 17328605 17328717 -128260571 + AluSq/x SINE Alu 5 126 -187 2313 92 0 3 chr10 17328720 17329015 -128260273 + AluSc SINE Alu 3 296 -13 2693 130 8 0 chr10 17329017 17329402 -128259886 - MER75 DNA T2_type -126 388 1 260 300 86 7 chr10 17329446 17329586 -128259702 + HAL1b LINE L1 506 656 -692 949 126 0 0 chr10 17329634 17329769 -128259519 + AluJb SINE Alu 1 135 -177 779 259 30 22 chr10 17329770 17330040 -128259248 + HAL1b LINE L1 663 934 -414 * 785 183 46 11 chr10 17330039 17330214 -128259074 - L1M4 LINE L1 -833 5313 5133 1124 235 34 47 chr10 17330227 17330614 -128258674 + L1ME1 LINE L1 5724 6105 -61 378 286 25 12 chr10 17330521 17330682 -128258606 + L1MA10 LINE L1 6169 6331 -3 * 2154 118 16 3 chr10 17330730 17331035 -128258253 - AluSq SINE Alu -4 309 1 802 150 17 0 chr10 17331386 17331506 -128257782 - AluSq/x SINE Alu -183 130 9 502 73 0 0 chr10 17331514 17331582 -128257706 - AluJo SINE Alu -4 308 241 898 183 17 51 chr10 17331583 17331758 -128257530 - AluJo SINE Alu -142 170 2 238 212 48 7 chr10 17331774 17331920 -128257368 + (TATATG)n Simple_repeat Simple_repeat 4 155 0 201 94 0 0 chr10 17332745 17332777 -128256511 + (GA)n Simple_repeat Simple_repeat 2 33 0 372 277 13 3 chr10 17332896 17333204 -128256084 + GA-rich Low_complexity Low_complexity 1 311 0 827 230 138 42 chr10 17333781 17333877 -128255411 + L1ME1 LINE L1 5146 5231 -935 1877 142 0 77 chr10 17333877 17334215 -128255073 - AluSx SINE Alu 0 312 1 827 230 138 42 chr10 17334215 17334556 -128254732 + L1ME1 LINE L1 5231 5617 -549 1836 184 15 26 chr10 17334564 17334720 -128254568 + MER1B DNA MER1_type 1 157 -2555 1882 114 0 18 chr10 17334720 17334992 -128254296 - AluSq SINE Alu 0 313 47 1836 184 15 26 chr10 17334992 17335178 -128254110 + MER1B DNA MER1_type 157 339 0 1636 241 71 31 chr10 17335178 17335701 -128253587 + L1ME1 LINE L1 5619 6162 -4 2055 123 27 0 chr10 17336607 17336908 -128252380 - AluSg SINE Alu -1 309 1 575 286 91 20 chr10 17337181 17337380 -128251908 - MIR SINE MIR -21 241 29 2135 115 31 0 chr10 17337520 17337841 -128251447 + L1MA2 LINE L1 5963 6293 -11 1152 102 0 0 chr10 17338083 17338240 -128251048 + AluSg/x SINE Alu 154 310 -2 362 275 132 25 chr10 17338308 17338692 -128250596 + L1MC4a LINE L1 5591 6012 -109 1601 175 14 27 chr10 17338814 17339106 -128250182 + AluJb SINE Alu 1 288 -24 2055 125 4 0 chr10 17339133 17339435 -128249853 + AluSx SINE Alu 1 303 0 1012 146 6 6 chr10 17339518 17339676 -128249612 - L1PB3 LINE L1 -1 6153 5996 304 255 71 21 chr10 17339691 17339832 -128249456 + L1ME4a LINE L1 5969 6116 -5 555 280 77 6 chr10 17340079 17340247 -128249041 - MLT1L LTR MaLR -5 610 431 227 380 92 30 chr10 17340423 17340791 -128248497 - L2 LINE L2 -629 2685 2295 1138 101 0 6 chr10 17340791 17340950 -128248338 + AluSg/x SINE Alu 154 311 -1 197 396 22 36 chr10 17341519 17341658 -128247630 + MIR3 SINE MIR 5 141 -67 922 248 102 8 chr10 17341833 17342087 -128247201 - MLT1L LTR MaLR 0 615 338 233 281 73 12 chr10 17342100 17342182 -128247106 + MIR SINE MIR 176 262 0 1417 184 21 115 chr10 17342227 17342259 -128247029 - MLT1B LTR MaLR 0 390 357 2379 115 81 0 chr10 17342259 17342606 -128246682 + THE1C LTR MaLR 1 375 0 1417 184 21 115 chr10 17342606 17342998 -128246290 - MLT1B LTR MaLR -33 357 6 268 247 12 0 chr10 17346126 17346207 -128243081 + L1MC4 LINE L1 6622 6703 -1339 879 177 0 6 chr10 17346234 17346392 -128242896 + AluJb SINE Alu 152 308 -4 370 301 23 74 chr10 17346478 17346654 -128242634 + MIR3 SINE MIR 39 205 -3 258 241 46 11 chr10 17347430 17347517 -128241771 + L2 LINE L2 2667 2756 -558 400 267 17 33 chr10 17347533 17347653 -128241635 + L2 LINE L2 3195 3312 -1 401 304 118 72 chr10 17347678 17348043 -128241245 + L2 LINE L2 2851 3240 -73 2840 97 68 0 chr10 17348043 17348454 -128240834 + L1PA13 LINE L1 5725 6163 0 401 304 118 72 chr10 17348454 17348519 -128240769 + L2 LINE L2 3240 3301 -12 2116 115 0 3 chr10 17348536 17348822 -128240466 + AluSg SINE Alu 1 285 -25 405 0 0 0 chr10 17348823 17348868 -128240420 + (TG)n Simple_repeat Simple_repeat 2 46 0 1830 167 0 0 chr10 17349514 17349813 -128239475 - AluSx SINE Alu -13 299 1 1360 232 71 40 chr10 17350074 17350527 -128238761 - MLT1C LTR MaLR 0 467 1 868 149 0 0 chr10 17350636 17350777 -128238511 - AluJo SINE Alu 0 312 172 978 135 5 125 chr10 17350988 17351062 -128238226 - AluJo SINE Alu -136 176 95 2054 133 0 13 chr10 17351062 17351370 -128237918 + AluSx SINE Alu 9 312 0 978 135 5 125 chr10 17351370 17351495 -128237793 - AluJo SINE Alu -217 95 1 248 270 0 16 chr10 17352409 17352472 -128236816 + CT-rich Low_complexity Low_complexity 4 65 0 1452 189 40 17 chr10 17352473 17352774 -128236514 - AluJb SINE Alu -4 308 1 320 294 48 24 chr10 17353284 17353410 -128235878 + MIR SINE MIR 20 148 -114 363 263 0 12 chr10 17354215 17354295 -128234993 - L2 LINE L2 -8 3305 3227 798 212 13 93 chr10 17354296 17354413 -128234875 - MER58A DNA MER1_type -2202 218 128 1884 173 0 19 chr10 17354413 17354549 -128234739 + AluSx SINE Alu 1 138 -174 2512 53 30 0 chr10 17354549 17354851 -128234437 + AluY SINE Alu 1 311 0 1884 173 0 19 chr10 17354851 17355032 -128234256 + AluSx SINE Alu 138 312 0 798 212 13 93 chr10 17355032 17355150 -128234138 - MER58A DNA MER1_type -2292 128 2 343 340 75 11 chr10 17355176 17355364 -128233924 - L2 LINE L2 -203 3110 2911 447 325 81 27 chr10 17355380 17355678 -128233610 - L2 LINE L2 -517 2797 2484 2265 88 3 14 chr10 17356516 17356813 -128232475 + AluSx SINE Alu 1 294 -18 534 284 104 67 chr10 17357027 17357303 -128231985 - L1ME4a LINE L1 -4 6117 5853 2032 125 3 7 chr10 17357303 17357598 -128231690 - AluSx SINE Alu -18 294 1 534 284 104 67 chr10 17357598 17357905 -128231383 - L1ME4a LINE L1 -268 5853 5512 926 131 42 48 chr10 17360798 17360966 -128228322 - AluJo SINE Alu -14 298 132 22 35 0 0 chr10 17360966 17360995 -128228293 + AT_rich Low_complexity Low_complexity 1 29 0 351 57 51 68 chr10 17360999 17361176 -128228112 + (TA)n Simple_repeat Simple_repeat 1 174 0 2104 128 7 0 chr10 17361176 17361465 -128227823 - AluSx SINE Alu -17 295 5 704 167 25 0 chr10 17361479 17361599 -128227689 - AluJo SINE Alu -188 124 2 1840 124 0 8 chr10 17362108 17362367 -128226921 + AluSc SINE Alu 36 292 -17 460 226 165 0 chr10 17362566 17362681 -128226607 + MLT1K LTR MaLR 25 158 -347 1871 143 29 0 chr10 17363121 17363401 -128225887 - AluSx SINE Alu -24 288 1 304 226 16 158 chr10 17363799 17363932 -128225356 + MIR SINE MIR 34 147 -69 1699 212 118 15 chr10 17364452 17364643 -128224645 + MLT1D LTR MaLR 1 171 -334 1539 176 3 54 chr10 17364643 17364956 -128224332 + AluJo SINE Alu 1 297 -15 1699 212 118 15 chr10 17364956 17365222 -128224066 + MLT1D LTR MaLR 171 505 0 341 330 11 0 chr10 17365550 17365641 -128223647 - MER74A LTR ERVL -63 495 404 1734 147 19 42 chr10 17366941 17367248 -128222040 - AluJo SINE Alu -12 300 1 288 247 24 0 chr10 17368713 17368798 -128220490 - MIR SINE MIR -59 203 117 204 271 35 35 chr10 17371001 17371086 -128218202 - MIR SINE MIR -77 185 101 550 288 88 50 chr10 17371150 17371469 -128217819 + MLT1K LTR MaLR 152 482 -106 275 292 88 0 chr10 17371652 17371765 -128217523 + L2 LINE L2 3118 3240 -73 1081 126 31 2 chr10 17372190 17372419 -128216869 - AluJb SINE Alu -14 298 21 23 33 0 0 chr10 17372669 17372699 -128216589 + AT_rich Low_complexity Low_complexity 1 30 0 570 221 71 0 chr10 17372702 17372815 -128216473 - FLAM_A SINE Alu -12 121 1 2393 120 92 2 chr10 17373370 17373763 -128215525 + MSTA LTR MaLR 1 428 0 1358 164 125 8 chr10 17374261 17374517 -128214771 - AluSg1 SINE Alu -23 286 1 736 178 0 30 chr10 17374612 17374747 -128214541 + FLAM_C SINE Alu 1 131 -2 1462 178 27 51 chr10 17375241 17375534 -128213754 - AluJo SINE Alu -26 286 1 865 161 44 0 chr10 17376307 17376487 -128212801 - MER33 DNA MER1_type -1 362 175 446 239 9 15 chr10 17376539 17376674 -128212614 - MER33 DNA MER1_type -251 73 1 2192 149 2 11 chr10 17376792 17377236 -128212052 + MER1A DNA MER1_type 4 529 0 415 213 104 67 chr10 17378324 17378488 -128210800 + MIR SINE MIR 79 248 -14 1670 158 70 44 chr10 17380662 17381047 -128208241 + L1MA2 LINE L1 5910 6304 0 21976 105 22 6 chr10 17381248 17385393 -128203895 + L1PA8 LINE L1 1960 6169 -3 293 301 7 27 chr10 17386516 17386662 -128202626 + MIR SINE MIR 79 221 -41 2425 64 0 0 chr10 17386967 17387248 -128202040 + AluY SINE Alu 15 295 -16 737 190 103 77 chr10 17387504 17387699 -128201589 + MER20 DNA MER1_type 20 219 0 2809 90 0 6 chr10 17387890 17388256 -128201032 - THE1B LTR MaLR 0 364 1 827 123 0 0 chr10 17388388 17388510 -128200778 + L1MA1 LINE L1 6181 6302 0 4747 137 29 8 chr10 17389415 17390198 -128199090 - L1PA16 LINE L1 0 6166 5367 294 233 123 0 chr10 17392002 17392075 -128197213 - MER94 DNA DNA -52 82 1 1766 175 3 22 chr10 17392426 17392740 -128196548 - AluJb SINE Alu -4 308 1 503 170 226 0 chr10 17392746 17392852 -128196436 - FLAM_C SINE Alu -10 133 4 393 280 54 42 chr10 17392953 17393121 -128196167 + MIR SINE MIR 3 172 -90 1459 297 91 10 chr10 17393141 17393824 -128195464 + MER20B DNA MER1_type 42 779 -4 2229 105 6 16 chr10 17393861 17394175 -128195113 + AluSq SINE Alu 1 311 -2 543 203 152 6 chr10 17395516 17395674 -128193614 - MER5A DNA MER1_type -5 184 4 863 130 7 22 chr10 17396459 17396597 -128192691 - FLAM_C SINE Alu -7 136 1 1624 172 26 30 chr10 17399046 17399349 -128189939 + AluJb SINE Alu 1 302 -10 887 211 22 0 chr10 17399412 17399597 -128189691 - MER20 DNA MER1_type -1 218 30 411 298 35 7 chr10 17399995 17400136 -128189152 + L3 LINE CR1 1425 1569 -8 272 269 87 0 chr10 17401090 17401194 -128188094 - MIR3 SINE MIR -7 201 89 757 222 148 14 chr10 17401356 17401572 -128187716 + L1ME LINE L1 5559 5803 -361 2521 296 120 17 chr10 17401680 17403092 -128186196 + L2 LINE L2 1277 2834 -480 367 267 337 0 chr10 17403121 17403409 -128185879 + L2 LINE L2 2929 3313 0 264 293 12 0 chr10 17404560 17404642 -128184646 - MER103 DNA DNA -1 165 83 260 218 0 36 chr10 17406503 17406558 -128182730 + polypurine Low_complexity Low_complexity 4 56 0 425 315 210 6 chr10 17406730 17407073 -128182215 + L2 LINE L2 2562 2974 -340 1025 101 13 0 chr10 17407415 17407564 -128181724 + L1PA10 LINE L1 6018 6168 0 1527 117 0 14 chr10 17407682 17407904 -128181384 + AluSg/x SINE Alu 84 302 -8 24 0 0 0 chr10 17409835 17409859 -128179429 + AT_rich Low_complexity Low_complexity 1 24 0 420 215 6 153 chr10 17410017 17410180 -128179108 + MIR SINE MIR 66 204 -58 1427 139 9 104 chr10 17410225 17410541 -128178747 - MER2 DNA MER2_type -58 287 2 458 346 21 30 chr10 17410800 17411034 -128178254 - MIR SINE MIR -22 240 9 2208 101 7 0 chr10 17411915 17412212 -128177076 + AluSx SINE Alu 1 299 -13 321 247 47 0 chr10 17412260 17412345 -128176943 - L1MC4 LINE L1 -1339 6703 6615 * 341 300 0 0 chr10 17412300 17412390 -128176898 + L1MC4 LINE L1 6614 6703 -1339 305 333 0 0 chr10 17412356 17412446 -128176842 - L1MC4 LINE L1 -1339 6703 6614 * 276 30 0 0 chr10 17412450 17412483 -128176805 + (CA)n Simple_repeat Simple_repeat 2 34 0 382 123 18 14 chr10 17413145 17413227 -128176061 + L1MB8 LINE L1 5364 5448 -721 1738 174 29 50 chr10 17413257 17413369 -128175919 + L1MB8 LINE L1 5421 5534 -644 2089 113 17 3 chr10 17413369 17413660 -128175628 - AluSc SINE Alu -14 295 1 1738 174 29 50 chr10 17413660 17413967 -128175321 + L1MB8 LINE L1 5534 5831 -347 1215 165 26 11 chr10 17413968 17414241 -128175047 + L1MB8 LINE L1 5902 6178 0 1676 173 0 53 chr10 17414330 17414653 -128174635 - AluJo SINE Alu -5 307 2 342 0 0 0 chr10 17415165 17415203 -128174085 + (TAAA)n Simple_repeat Simple_repeat 1 38 0 180 244 0 0 chr10 17416789 17416830 -128172458 + MIR SINE MIR 222 262 0 2390 82 0 7 chr10 17416965 17417269 -128172019 - AluY SINE Alu -9 302 1 180 0 0 0 chr10 17418781 17418801 -128170487 + (A)n Simple_repeat Simple_repeat 1 20 0 411 186 132 23 chr10 17418853 17418940 -128170348 + L1ME2 LINE L1 6022 6129 -35 183 42 0 0 chr10 17418940 17418964 -128170324 + (CA)n Simple_repeat Simple_repeat 2 25 0 411 186 132 23 chr10 17418964 17419005 -128170283 + L1ME2 LINE L1 6129 6164 0 1823 162 17 3 chr10 17419071 17419367 -128169921 - AluJb SINE Alu -12 300 1 274 296 93 10 chr10 17419629 17419748 -128169540 - MIR SINE MIR -62 146 34 2108 133 0 0 chr10 17420389 17420683 -128168605 - AluSq SINE Alu -11 302 9 2306 120 3 0 chr10 17420776 17421084 -128168204 + AluSx SINE Alu 1 309 -3 1521 187 33 23 chr10 17421165 17421464 -128167824 + AluJb SINE Alu 1 302 -10 325 355 138 5 chr10 17421711 17421928 -128167360 + MIR SINE MIR 13 258 -4 471 182 250 20 chr10 17422029 17422177 -128167111 + Tigger1 DNA MER2_type 1 182 -2236 * 634 214 146 10 chr10 17422144 17422336 -128166952 + Tigger1 DNA MER2_type 2201 2418 0 233 314 18 6 chr10 17422662 17422831 -128166457 - L1ME LINE L1 -239 5865 5695 2184 111 10 0 chr10 17424099 17424397 -128164891 + AluSx SINE Alu 1 301 -11 2172 125 0 0 chr10 17424830 17425134 -128164154 + AluSx SINE Alu 1 304 -8 441 282 34 76 chr10 17425265 17426169 -128163119 - L1ME LINE L1 -869 5260 4608 2027 216 48 54 chr10 17426346 17426864 -128162424 + LTR40a LTR ERVL 4 518 -1 423 291 70 101 chr10 17426892 17427034 -128162254 - L1ME LINE L1 -4982 1137 992 1981 152 3 7 chr10 17427034 17427336 -128161952 - AluSx SINE Alu -11 301 1 423 291 70 101 chr10 17427336 17427672 -128161616 - L1ME LINE L1 -5127 992 647 393 22 0 0 chr10 17427672 17427718 -128161570 + (TG)n Simple_repeat Simple_repeat 2 47 0 423 291 70 101 chr10 17427718 17428384 -128160904 - L1ME LINE L1 -5472 647 28 309 333 94 22 chr10 17430916 17431096 -128158192 + MIR3 SINE MIR 7 199 -9 698 252 73 32 chr10 17431282 17431320 -128157968 - MIR SINE MIR -8 254 219 2238 134 0 3 chr10 17431320 17431633 -128157655 - AluSx SINE Alu 0 312 1 698 252 73 32 chr10 17431633 17431812 -128157476 - MIR SINE MIR -43 219 28 499 63 0 0 chr10 17432884 17432947 -128156341 + Alu SINE Alu 1 63 -255 2011 140 0 34 chr10 17433094 17433444 -128155844 + AluSx SINE Alu 1 339 0 2102 126 3 0 chr10 17433879 17434173 -128155115 - AluSx SINE Alu -17 295 1 234 287 111 50 chr10 17434211 17434392 -128154896 - L2 LINE L2 -17 3296 3105 652 298 13 14 chr10 17434398 17434583 -128154705 + MIR SINE MIR 2 180 -62 201 321 7 102 chr10 17434666 17434803 -128154485 - L2 LINE L2 -219 3053 2930 300 350 81 0 chr10 17434817 17434940 -128154348 + MIR3 SINE MIR 73 205 -3 212 380 28 42 chr10 17435579 17435721 -128153567 - MIR3 SINE MIR -53 155 16 2013 56 0 4 chr10 17435989 17436258 -128153030 - L1PA10 LINE L1 -189 5979 5712 218 359 88 19 chr10 17436948 17437107 -128152181 + L2 LINE L2 2237 2406 -908 2113 124 0 3 chr10 17437160 17437451 -128151837 - AluSq SINE Alu -23 290 1 669 76 0 0 chr10 17437517 17437609 -128151679 + L1P4 LINE L1 5689 5780 -386 722 125 0 10 chr10 17437609 17437713 -128151575 - FLAM_C SINE Alu -24 119 17 324 222 20 10 chr10 17437726 17437825 -128151463 - L1MC5 LINE L1 -1124 6837 6738 995 191 0 0 chr10 17437837 17437999 -128151289 - FRAM SINE Alu -15 161 1 2198 115 0 7 chr10 17438007 17438311 -128150977 - AluSc SINE Alu -7 302 1 1775 219 16 67 chr10 17438370 17438402 -128150886 + L1ME1 LINE L1 5572 5604 -562 2362 63 0 40 chr10 17438402 17438704 -128150584 + AluY SINE Alu 1 290 -21 1775 219 16 67 chr10 17438704 17439251 -128150037 + L1ME1 LINE L1 5604 6121 -45 355 305 60 0 chr10 17439150 17439301 -128149987 + L1MA10 LINE L1 6175 6334 0 * 321 292 11 0 chr10 17439309 17439398 -128149890 - MIR SINE MIR -160 102 13 22 0 0 0 chr10 17440785 17440807 -128148481 + AT_rich Low_complexity Low_complexity 1 22 0 346 260 305 24 chr10 17440866 17441112 -128148176 - L2 LINE L2 -10 3303 2989 2093 112 0 3 chr10 17441157 17441443 -128147845 + AluSx SINE Alu 23 307 -5 1153 139 35 0 chr10 17441443 17441616 -128147672 + AluSg/x SINE Alu 134 312 0 316 295 79 7 chr10 17442223 17442362 -128146926 + L1MC3 LINE L1 6708 6856 -929 1057 172 50 14 chr10 17442545 17442557 -128146731 - MER46A DNA MER2_type -2495 236 226 2505 113 3 45 chr10 17442557 17442937 -128146351 - THE1B LTR MaLR 0 364 1 1057 172 50 14 chr10 17442937 17443145 -128146143 - MER46A DNA MER2_type -2505 226 8 305 377 36 7 chr10 17445912 17446050 -128143238 - L2 LINE L2 -220 3052 2911 2291 118 0 0 chr10 17446255 17446561 -128142727 - AluSx SINE Alu 0 312 7 200 264 0 28 chr10 17446748 17446787 -128142501 + A-rich Low_complexity Low_complexity 1 39 -31 2641 128 21 26 chr10 17446787 17447215 -128142073 - MSTB LTR MaLR 0 426 1 200 264 0 28 chr10 17447215 17447247 -128142041 + A-rich Low_complexity Low_complexity 39 70 0 228 337 20 0 chr10 17448008 17448106 -128141182 - MIR3 SINE MIR -14 194 95 24 77 0 0 chr10 17448192 17448244 -128141044 + AT_rich Low_complexity Low_complexity 1 52 0 3230 128 47 6 chr10 17448596 17448918 -128140370 + MER41C LTR ERV1 3 357 -197 339 25 0 0 chr10 17448918 17448958 -128140330 + (CA)n Simple_repeat Simple_repeat 1 40 0 3230 128 47 6 chr10 17448958 17449165 -128140123 + MER41C LTR ERV1 357 554 0 239 0 32 0 chr10 17449539 17449570 -128139718 + (TG)n Simple_repeat Simple_repeat 2 33 0 1299 160 72 96 chr10 17449986 17450005 -128139283 + MLT1B LTR MaLR 37 55 -335 4366 131 26 53 chr10 17450005 17450802 -128138486 - MER4E LTR ERV1 -3 776 1 1299 160 72 96 chr10 17450802 17451145 -128138143 + MLT1B LTR MaLR 55 390 0 2067 125 0 7 chr10 17451351 17451639 -128137649 + AluSx SINE Alu 1 286 -26 4110 91 2 0 chr10 17451675 17452226 -128137062 - MER41A LTR ERV1 0 554 3 1864 157 0 11 chr10 17454100 17454408 -128134880 - AluJb SINE Alu 0 305 1 2190 91 0 10 chr10 17454710 17455008 -128134280 + AluY SINE Alu 1 295 -16 1667 171 0 37 chr10 17455104 17455425 -128133863 + AluJo SINE Alu 1 309 -3 2103 110 0 69 chr10 17458108 17458443 -128130845 - AluSx SINE Alu 0 312 1 1957 120 38 7 chr10 17459348 17459639 -128129649 - AluSx SINE Alu -12 300 1 1732 163 14 10 chr10 17459967 17460256 -128129032 + AluJo SINE Alu 1 290 -22 32 0 0 0 chr10 17460256 17460288 -128129000 + AT_rich Low_complexity Low_complexity 1 32 0 1621 186 3 26 chr10 17460953 17461264 -128128024 - AluJo SINE Alu -8 304 1 321 270 80 10 chr10 17462106 17462206 -128127082 - MIR SINE MIR -70 192 86 2042 125 6 22 chr10 17463760 17464073 -128125215 + AluSx SINE Alu 1 308 -4 288 0 0 0 chr10 17464373 17464405 -128124883 + (T)n Simple_repeat Simple_repeat 1 32 0 312 349 54 0 chr10 17467131 17467260 -128122028 + L1ME4a LINE L1 5716 5851 -391 3684 201 19 1 chr10 17468513 17469249 -128120039 + MSTA-int LTR MaLR 903 1651 0 2389 157 26 9 chr10 17469249 17469670 -128119618 + MSTA LTR MaLR 1 428 0 1296 234 57 41 chr10 17469671 17470162 -128119126 + L1ME4a LINE L1 5491 5989 -132 263 211 53 0 chr10 17470162 17470238 -128119050 + L1ME4a LINE L1 5940 6019 -102 646 244 116 6 chr10 17470284 17470448 -128118840 - MER5A DNA MER1_type 0 189 8 26 74 0 0 chr10 17470472 17470526 -128118762 + AT_rich Low_complexity Low_complexity 1 54 0 431 353 25 47 chr10 17470639 17470874 -128118414 - MIR SINE MIR -13 249 20 22 0 0 0 chr10 17471070 17471092 -128118196 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr10 17471171 17471193 -128118095 + AT_rich Low_complexity Low_complexity 1 22 0 1623 207 23 10 chr10 17471232 17471623 -128117665 - L1MB3 LINE L1 -2 6181 5786 1133 195 69 36 chr10 17471623 17471854 -128117434 + MER2 DNA MER2_type 1 223 -122 2218 112 3 31 chr10 17471854 17472175 -128117113 - AluSx SINE Alu 0 312 1 1133 195 69 36 chr10 17472175 17472207 -128117081 + MER2 DNA MER2_type 223 252 -93 650 202 34 0 chr10 17472207 17472326 -128116962 - FLAM_A SINE Alu -10 123 1 1133 195 69 36 chr10 17472326 17472395 -128116893 + MER2 DNA MER2_type 252 345 0 1889 195 90 16 chr10 17472400 17472947 -128116341 - L1MB3 LINE L1 -401 5782 5195 4664 174 36 19 chr10 17472979 17474512 -128114776 - L1MA6 LINE L1 -6 6996 5443 1687 169 57 6 chr10 17474528 17474877 -128114411 - Tigger2a DNA MER2_type -67 367 1 9943 221 61 30 chr10 17474877 17475386 -128113902 - L1MA6 LINE L1 -1404 5444 4952 7421 32 21 0 chr10 17475386 17476319 -128112969 - L1PA4 LINE L1 0 6155 5213 9943 221 61 30 chr10 17476319 17477053 -128112235 - L1MA6 LINE L1 -1896 4952 4242 2906 79 2 5 chr10 17477053 17477446 -128111842 - L1PA7 LINE L1 0 6154 5763 9943 221 61 30 chr10 17477446 17480445 -128108843 - L1MA6 LINE L1 -2606 4242 1370 939 303 91 30 chr10 17481026 17481633 -128107655 - L1MA6 LINE L1 -6132 717 74 * 2447 226 12 8 chr10 17481631 17482281 -128107007 - L1M4 LINE L1 -934 5212 4560 261 139 0 0 chr10 17484484 17484527 -128104761 + (A)n Simple_repeat Simple_repeat 1 43 0 2217 113 0 3 chr10 17485085 17485387 -128103901 + AluSq SINE Alu 1 301 -12 1638 157 6 62 chr10 17485394 17485718 -128103570 + AluJo SINE Alu 1 306 -6 189 288 109 49 chr10 17485890 17486074 -128103214 + L2 LINE L2 3026 3220 -93 276 316 53 0 chr10 17486362 17486457 -128102831 - MIR SINE MIR -123 139 40 1149 181 0 5 chr10 17487173 17487412 -128101876 + AluJb SINE Alu 86 323 0 569 237 144 21 chr10 17488151 17488345 -128100943 + MIR SINE MIR 43 260 -2 1795 130 59 15 chr10 17488385 17488709 -128100579 + MER44D DNA MER2_type 2 609 0 352 327 12 36 chr10 17488827 17488995 -128100293 - L2 LINE L2 -927 2387 2224 267 236 0 0 chr10 17489139 17489211 -128100077 + (TA)n Simple_repeat Simple_repeat 1 72 0 303 333 0 0 chr10 17489218 17489308 -128099980 + L1MC4 LINE L1 6614 6703 -1339 207 204 0 0 chr10 17489308 17489352 -128099936 + (TA)n Simple_repeat Simple_repeat 2 45 0 310 333 0 0 chr10 17489352 17489442 -128099846 + L1MC4 LINE L1 6614 6703 -1339 2313 96 0 7 chr10 17490325 17490627 -128098661 - AluSq SINE Alu -13 300 1 678 276 67 41 chr10 17491222 17491566 -128097722 + L1ME3A LINE L1 5808 6160 -10 294 296 62 62 chr10 17491609 17491812 -128097476 + HAL1b LINE L1 345 550 -798 970 205 22 119 chr10 17491812 17492216 -128097072 + MLT1A1 LTR MaLR 1 365 0 294 296 62 62 chr10 17492216 17492320 -128096968 + HAL1b LINE L1 549 652 -696 257 227 30 0 chr10 17492362 17492428 -128096860 + (TA)n Simple_repeat Simple_repeat 1 68 0 2349 91 3 0 chr10 17492652 17492949 -128096339 - AluSc SINE Alu -11 298 1 1851 231 52 8 chr10 17494951 17495431 -128093857 + MLT1D LTR MaLR 1 501 -4 2357 144 31 9 chr10 17496294 17496717 -128092571 - MSTB1 LTR MaLR 0 432 1 236 254 174 65 chr10 17496766 17497041 -128092247 + MLT1H LTR MaLR 245 549 0 1929 124 28 14 chr10 17497215 17497498 -128091790 - AluSg SINE Alu -23 287 1 1594 55 0 5 chr10 17497632 17497831 -128091457 + AluY SINE Alu 101 298 -13 409 308 91 29 chr10 17497831 17498205 -128091083 - L1ME LINE L1 -412 5709 5313 1602 221 48 8 chr10 17498674 17499032 -128090256 + MLT1A2 LTR MaLR 3 374 0 270 252 147 49 chr10 17499271 17499414 -128089874 + MIR SINE MIR 13 169 -93 1919 140 0 52 chr10 17499593 17499921 -128089367 + AluSx SINE Alu 1 311 -1 1616 158 83 70 chr10 17501152 17501537 -128087751 + MLT1B LTR MaLR 1 390 0 268 326 54 46 chr10 17501880 17501921 -128087367 + L1MEc LINE L1 274 313 -6250 2567 95 24 11 chr10 17501921 17502291 -128086997 - THE1C LTR MaLR 0 375 1 268 326 54 46 chr10 17502291 17502617 -128086671 + L1MEc LINE L1 313 644 -5919 440 250 48 108 chr10 17502827 17503390 -128085898 + L1MEc LINE L1 796 1324 -5239 312 291 101 14 chr10 17503428 17503576 -128085712 + L1MEc LINE L1 1174 1334 -5050 612 257 51 36 chr10 17503848 17504179 -128085109 + L1MEc LINE L1 1743 2078 -4485 828 236 113 25 chr10 17504228 17504549 -128084739 + L1MEc LINE L1 2926 3296 -3086 2161 105 0 16 chr10 17504549 17504853 -128084435 + AluY SINE Alu 1 299 -12 828 236 113 25 chr10 17504853 17504963 -128084325 + L1MEc LINE L1 3296 3395 -2987 5694 73 0 3 chr10 17505092 17505831 -128083457 - L1PA8 LINE L1 -16 6156 5420 1287 52 0 0 chr10 17505843 17505997 -128083291 - AluY SINE Alu 0 311 158 2179 105 27 0 chr10 17505999 17506295 -128082993 - AluSp SINE Alu -9 304 1 3899 227 148 10 chr10 17506313 17507745 -128081543 + L1MEc LINE L1 3648 5277 -1105 548 217 36 18 chr10 17507740 17507906 -128081382 + L1MB8 LINE L1 5979 6147 -31 * 514 311 44 17 chr10 17508054 17508234 -128081054 - L2 LINE L2 -558 2756 2572 25 0 0 0 chr10 17508990 17509015 -128080273 + AT_rich Low_complexity Low_complexity 1 25 0 202 206 221 0 chr10 17509721 17509789 -128079499 + MIR SINE MIR 64 146 -62 1713 188 7 7 chr10 17510234 17510543 -128078745 + AluJo SINE Alu 1 309 -3 189 107 0 0 chr10 17511004 17511032 -128078256 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 513 232 67 55 chr10 17511604 17511761 -128077527 - MIR SINE MIR -5 257 94 2165 123 27 30 chr10 17511761 17512126 -128077162 - THE1B LTR MaLR 0 364 1 513 232 67 55 chr10 17512126 17512222 -128077066 - MIR SINE MIR -168 94 1 207 0 0 0 chr10 17513050 17513073 -128076215 + (T)n Simple_repeat Simple_repeat 1 23 0 1332 235 104 58 chr10 17513588 17514147 -128075141 + L2 LINE L2 2123 2714 -600 1650 188 0 3 chr10 17514147 17514429 -128074859 + AluJo SINE Alu 13 293 -19 1332 235 104 58 chr10 17514429 17514477 -128074811 + L2 LINE L2 2714 2758 -556 1953 209 60 28 chr10 17514478 17514947 -128074341 - MLT1D LTR MaLR 0 505 22 665 235 182 19 chr10 17514949 17515413 -128073875 + L2 LINE L2 2754 3311 -2 372 267 142 36 chr10 17516310 17516535 -128072753 + MIR SINE MIR 14 262 0 219 336 9 18 chr10 17517125 17517235 -128072053 - MER5B DNA MER1_type -69 109 1 2130 122 3 3 chr10 17517248 17517551 -128071737 - AluJb SINE Alu -9 303 1 210 160 20 20 chr10 17517997 17518047 -128071241 - L2 LINE L2 -74 3239 3190 1357 157 48 13 chr10 17520160 17520389 -128068899 - AluJo SINE Alu -19 293 57 30 0 0 0 chr10 17520843 17520873 -128068415 + AT_rich Low_complexity Low_complexity 1 30 0 2000 155 0 3 chr10 17521500 17521803 -128067485 - AluJb SINE Alu -6 306 5 23 0 0 0 chr10 17521807 17521830 -128067458 + AT_rich Low_complexity Low_complexity 1 23 0 1828 163 20 47 chr10 17521833 17522237 -128067051 - L1MA8 LINE L1 -2 6289 5897 966 154 77 5 chr10 17522538 17522733 -128066555 + L1MB2 LINE L1 5962 6170 -1 2460 153 16 25 chr10 17522746 17523184 -128066104 + Tigger2a DNA MER2_type 1 434 0 250 96 53 32 chr10 17523184 17523278 -128066010 + (TG)n Simple_repeat Simple_repeat 1 96 0 464 139 42 18 chr10 17523355 17523521 -128065767 + (TG)n Simple_repeat Simple_repeat 2 171 0 27 0 0 0 chr10 17523624 17523651 -128065637 + AT_rich Low_complexity Low_complexity 1 27 0 442 284 47 38 chr10 17524862 17525073 -128064215 + MIR SINE MIR 20 232 -30 22 0 0 0 chr10 17525577 17525599 -128063689 + AT_rich Low_complexity Low_complexity 1 22 0 1726 173 0 24 chr10 17525602 17525897 -128063391 + AluJb SINE Alu 1 288 -24 2349 103 3 0 chr10 17526612 17526922 -128062366 + AluSq SINE Alu 1 311 -2 1891 151 13 16 chr10 17527319 17527624 -128061664 - AluSx SINE Alu -5 307 4 313 250 206 31 chr10 17527654 17527814 -128061474 + L2 LINE L2 3121 3308 -5 2221 120 0 0 chr10 17527959 17528260 -128061028 + AluY SINE Alu 1 301 -10 201 122 49 0 chr10 17528679 17528720 -128060568 + (TA)n Simple_repeat Simple_repeat 2 44 0 1932 87 64 0 chr10 17529142 17529407 -128059881 + AluSc SINE Alu 25 306 -3 2436 151 39 5 chr10 17529602 17530014 -128059274 - MSTA LTR MaLR -2 426 1 22 35 0 0 chr10 17530613 17530642 -128058646 + AT_rich Low_complexity Low_complexity 1 29 0 213 121 0 0 chr10 17531718 17531751 -128057537 + (CA)n Simple_repeat Simple_repeat 2 34 0 2096 139 3 0 chr10 17532818 17533112 -128056176 + AluSq SINE Alu 1 295 -18 1977 136 48 0 chr10 17533116 17533238 -128056050 + AluSq SINE Alu 1 116 -197 198 0 0 0 chr10 17533238 17533260 -128056028 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 1977 136 48 0 chr10 17533260 17533432 -128055856 + AluSq SINE Alu 116 309 -4 380 180 126 45 chr10 17534580 17534691 -128054597 + MIR3 SINE MIR 83 202 -6 707 244 5 46 chr10 17535687 17535884 -128053404 - MER3 DNA MER1_type -19 190 2 781 220 35 0 chr10 17535893 17536066 -128053222 - MER5A DNA MER1_type 0 189 11 207 0 0 0 chr10 17537342 17537365 -128051923 + (A)n Simple_repeat Simple_repeat 1 23 0 243 61 0 0 chr10 17539026 17539059 -128050229 + (A)n Simple_repeat Simple_repeat 1 33 0 1928 153 27 0 chr10 17539309 17539609 -128049679 + AluJb SINE Alu 1 308 -4 1749 137 12 0 chr10 17540718 17540973 -128048315 + AluSx SINE Alu 44 301 -11 1001 167 261 29 chr10 17541202 17541447 -128047841 + AluJo SINE Alu 1 302 0 24 0 0 0 chr10 17543186 17543210 -128046078 + AT_rich Low_complexity Low_complexity 1 24 0 426 87 0 29 chr10 17543294 17543363 -128045925 - Alu SINE Alu -5 307 241 1116 145 124 0 chr10 17544403 17544596 -128044692 - AluJo SINE Alu -10 302 86 200 238 0 32 chr10 17545046 17545109 -128044179 + GA-rich Low_complexity Low_complexity 5 65 0 1303 199 63 11 chr10 17546641 17546927 -128042361 - AluJo SINE Alu -11 301 1 843 159 0 0 chr10 17548089 17548221 -128041067 + FLAM_C SINE Alu 1 132 -1 27 0 0 0 chr10 17548854 17548881 -128040407 + AT_rich Low_complexity Low_complexity 1 27 0 1967 160 3 3 chr10 17549289 17549595 -128039693 - AluJb SINE Alu -6 306 1 2106 132 0 0 chr10 17549743 17550038 -128039250 - AluSc SINE Alu -14 295 1 180 97 0 0 chr10 17550041 17550072 -128039216 + (TTTTTG)n Simple_repeat Simple_repeat 2 32 0 888 259 127 3 chr10 17550134 17550466 -128038822 - L1MC4 LINE L1 -150 7892 7520 941 237 24 0 chr10 17550472 17550644 -128038644 - AluJb SINE Alu -16 296 117 195 42 0 0 chr10 17550644 17550668 -128038620 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 941 237 24 0 chr10 17550668 17550702 -128038586 - AluJb SINE Alu -195 117 85 2400 121 55 38 chr10 17550738 17550920 -128038368 - MSTA LTR MaLR -1 427 250 2659 93 11 16 chr10 17550920 17551285 -128038003 - THE1B LTR MaLR -1 363 1 2400 121 55 38 chr10 17551285 17551387 -128037901 - MSTA LTR MaLR -178 250 151 2962 98 43 14 chr10 17551387 17551791 -128037497 + MLT2A2 LTR ERVL 1 421 -32 807 108 0 0 chr10 17551791 17551911 -128037377 + (TA)n Simple_repeat Simple_repeat 1 120 0 2962 98 43 14 chr10 17551911 17551946 -128037342 + MLT2A2 LTR ERVL 421 453 0 2400 121 55 38 chr10 17551946 17552080 -128037208 - MSTA LTR MaLR -277 151 1 658 230 74 39 chr10 17552080 17552310 -128036978 - L1MC4 LINE L1 -565 7477 7240 324 207 11 81 chr10 17552327 17552414 -128036874 + MER20 DNA MER1_type 4 84 -135 274 250 0 0 chr10 17552409 17552473 -128036815 + Charlie5 DNA MER1_type 2521 2584 -28 * 433 268 16 16 chr10 17552483 17552606 -128036682 + MER20 DNA MER1_type 97 219 0 1607 248 26 75 chr10 17552607 17553211 -128036077 - L1MC4a LINE L1 -813 6995 6421 2188 147 28 0 chr10 17553887 17554241 -128035047 + THE1B LTR MaLR 1 364 0 275 268 82 0 chr10 17554532 17554629 -128034659 - MLT1J LTR MaLR 0 511 407 1570 195 37 28 chr10 17554693 17555047 -128034241 + MLT1A1 LTR MaLR 9 365 0 1010 241 122 4 chr10 17555047 17555325 -128033963 - MLT1J LTR MaLR -200 311 1 2037 156 119 8 chr10 17557006 17557391 -128031897 + MSTA LTR MaLR 1 428 0 1878 114 0 0 chr10 17557455 17557700 -128031588 - AluSx SINE Alu -57 255 11 29 0 0 0 chr10 17557704 17557733 -128031555 + AT_rich Low_complexity Low_complexity 1 29 0 1989 128 29 10 chr10 17557735 17558041 -128031247 + AluSx SINE Alu 1 312 0 2155 117 14 0 chr10 17558623 17558914 -128030374 - AluSg SINE Alu -15 295 1 22 56 0 0 chr10 17559437 17559473 -128029815 + AT_rich Low_complexity Low_complexity 1 36 0 207 319 25 34 chr10 17560045 17560164 -128029124 - L2 LINE L2 -10 3262 3145 2748 164 57 20 chr10 17560198 17560687 -128028601 + MLT2B2 LTR ERVL 2 508 -7 490 301 48 21 chr10 17560922 17561108 -128028180 - MIR3 SINE MIR -1 207 17 2405 90 0 6 chr10 17561457 17561769 -128027519 + AluSx SINE Alu 3 312 0 576 268 52 31 chr10 17561785 17561979 -128027309 - MIR SINE MIR 0 262 65 300 139 0 0 chr10 17563599 17563642 -128025646 + MER66B LTR ERV1 304 346 -140 2257 98 0 0 chr10 17564233 17564530 -128024758 - AluSx SINE Alu 0 312 16 2424 142 27 3 chr10 17564715 17565081 -128024207 + THE1C LTR MaLR 1 375 0 3218 213 62 35 chr10 17565625 17565890 -128023398 + L1MC2 LINE L1 8 264 -5969 255 31 0 0 chr10 17565890 17565922 -128023366 + (CAA)n Simple_repeat Simple_repeat 2 33 0 3218 213 62 35 chr10 17565922 17566998 -128022290 + L1MC2 LINE L1 264 1384 -4849 10252 214 46 35 chr10 17567009 17568318 -128020970 + L1MC2 LINE L1 2181 3474 -3288 263 74 481 0 chr10 17568318 17568372 -128020916 + MADE1 DNA Mariner 1 80 0 10252 214 46 35 chr10 17568372 17571384 -128017904 + L1MC2 LINE L1 3474 6589 -173 1341 111 0 43 chr10 17571384 17571611 -128017677 + AluSg/x SINE Alu 84 301 0 641 212 60 13 chr10 17571612 17571763 -128017525 + L1MC2 LINE L1 6583 6740 -22 2315 51 31 17 chr10 17571773 17572067 -128017221 + AluY SINE Alu 1 298 -13 569 319 97 0 chr10 17572757 17572964 -128016324 + MIR SINE MIR 13 239 -23 1827 132 7 28 chr10 17573144 17573432 -128015856 - AluSx SINE Alu -18 294 13 2354 88 0 0 chr10 17574130 17574427 -128014861 + AluY SINE Alu 6 302 -9 2061 128 3 19 chr10 17574581 17574894 -128014394 + AluSq SINE Alu 3 310 -3 232 339 68 0 chr10 17574896 17575014 -128014274 + MIR SINE MIR 56 181 -81 2106 171 18 33 chr10 17575079 17575471 -128013817 + MLT1B LTR MaLR 1 386 -4 21 0 0 0 chr10 17575970 17575991 -128013297 + AT_rich Low_complexity Low_complexity 1 21 0 2070 122 0 31 chr10 17576322 17576642 -128012646 + AluSx SINE Alu 1 310 -2 1426 196 44 86 chr10 17577118 17577163 -128012125 + MER7A DNA MER2_type 2 47 -2991 1507 183 0 0 chr10 17577163 17577420 -128011868 + AluJb SINE Alu 41 297 -15 1426 196 44 86 chr10 17577420 17577736 -128011552 + MER7A DNA MER2_type 47 346 0 686 216 114 0 chr10 17577739 17577906 -128011382 - MIR SINE MIR -2 260 75 2412 89 0 6 chr10 17578543 17578857 -128010431 + AluSx SINE Alu 1 312 0 907 174 108 15 chr10 17579369 17579564 -128009724 - AluJo SINE Alu -16 296 84 384 276 102 53 chr10 17579860 17580106 -128009182 - MIR SINE MIR -2 260 3 1894 156 0 28 chr10 17580541 17580862 -128008426 + AluJo SINE Alu 1 312 0 298 349 83 78 chr10 17581932 17582330 -128006958 - L2 LINE L2 -1 3271 2872 663 273 64 14 chr10 17582459 17582711 -128006577 + Charlie8 DNA MER1_type 28 279 -2138 1499 219 102 8 chr10 17584929 17585321 -128003967 - L1MC4 LINE L1 -407 7635 7207 983 237 71 4 chr10 17585495 17585748 -128003540 - MLT1B LTR MaLR 0 390 121 308 318 83 37 chr10 17585748 17585965 -128003323 - HAL1 LINE L1 -1481 1026 800 980 204 212 0 chr10 17586317 17586586 -128002702 - MER21B LTR ERV1 -11 852 527 330 281 45 0 chr10 17586819 17586908 -128002380 + L2 LINE L2 3180 3272 0 25 31 0 0 chr10 17587157 17587189 -128002099 + AT_rich Low_complexity Low_complexity 1 32 0 552 273 122 18 chr10 17587285 17587571 -128001717 - L3 LINE CR1 -576 1001 686 855 142 0 0 chr10 17587618 17587745 -128001543 - AluSg/x SINE Alu -19 291 165 2679 161 9 14 chr10 17588171 17588599 -128000689 + MSTB LTR MaLR 1 426 0 6470 184 10 1 chr10 17588599 17589715 -127999573 + MSTB-int LTR MaLR 1 1126 -525 600 251 156 0 chr10 17590021 17590220 -127999068 - MIR SINE MIR -1 261 32 1660 200 0 10 chr10 17590427 17590737 -127998551 - AluJo SINE Alu -5 307 1 2144 124 3 7 chr10 17590900 17591206 -127998082 - AluSx SINE Alu -7 305 1 998 179 0 39 chr10 17591649 17591856 -127997432 + L1MB8 LINE L1 5980 6178 0 360 0 0 0 chr10 17592013 17592053 -127997235 + (TG)n Simple_repeat Simple_repeat 2 41 0 327 278 111 19 chr10 17592091 17592199 -127997089 - L2 LINE L2 0 3313 3196 212 169 0 17 chr10 17592743 17592802 -127996486 + (TATG)n Simple_repeat Simple_repeat 3 60 0 503 299 54 9 chr10 17593485 17593709 -127995579 + L1ME4a LINE L1 5669 5902 -219 1928 121 4 0 chr10 17593995 17594267 -127995021 - AluSx SINE Alu -26 286 14 307 325 19 39 chr10 17594504 17594658 -127994630 - MER5A DNA MER1_type -4 185 35 2261 103 0 13 chr10 17594815 17595115 -127994173 + AluSq SINE Alu 1 296 -17 805 99 0 0 chr10 17596192 17596303 -127992985 - AluY SINE Alu -3 308 198 2100 130 23 0 chr10 17596308 17596608 -127992680 - AluSx SINE Alu -5 307 1 2057 123 32 0 chr10 17597193 17597478 -127991810 + AluSx SINE Alu 1 294 -18 216 67 0 0 chr10 17598212 17598242 -127991046 + (TG)n Simple_repeat Simple_repeat 1 30 0 193 0 0 86 chr10 17600015 17600050 -127989238 + (GAAA)n Simple_repeat Simple_repeat 2 33 0 22 0 0 0 chr10 17600261 17600283 -127989005 + AT_rich Low_complexity Low_complexity 1 22 0 307 347 69 35 chr10 17601029 17601202 -127988086 + L2 LINE L2 2995 3173 -99 289 281 22 11 chr10 17601673 17601762 -127987526 - MIR3 SINE MIR -36 172 83 484 161 0 0 chr10 17602178 17602265 -127987023 + L1MB8 LINE L1 6083 6169 -9 221 346 63 79 chr10 17603609 17603976 -127985312 + L2 LINE L2 382 742 -2572 2176 129 0 3 chr10 17605024 17605326 -127983962 - AluSx SINE Alu -11 301 1 7777 20 2 8 chr10 17605754 17606613 -127982675 + L1PA4 LINE L1 5300 6153 -2 835 277 121 39 chr10 17607678 17608141 -127981147 + L2 LINE L2 2541 3032 -281 1146 132 12 0 chr10 17608147 17608314 -127980974 + AluSg/x SINE Alu 137 305 -7 213 222 37 25 chr10 17608350 17608431 -127980857 + L2 LINE L2 3081 3162 -151 1335 163 5 0 chr10 17608433 17608642 -127980646 - AluJo SINE Alu -16 296 87 450 288 27 34 chr10 17608646 17608792 -127980496 + L2 LINE L2 3168 3312 -1 411 279 188 49 chr10 17608821 17609570 -127979718 + L2 LINE L2 2369 3278 -35 287 229 12 24 chr10 17610175 17610258 -127979030 + (CATATA)n Simple_repeat Simple_repeat 5 86 0 2238 117 3 0 chr10 17610373 17610682 -127978606 + AluSq SINE Alu 2 311 -2 1876 151 13 16 chr10 17611079 17611384 -127977904 - AluSx SINE Alu -5 307 4 359 244 206 31 chr10 17611414 17611574 -127977714 + L2 LINE L2 3121 3308 -5 2203 120 0 0 chr10 17611719 17612020 -127977268 + AluY SINE Alu 1 301 -10 189 279 0 49 chr10 17612371 17612432 -127976856 - MIR SINE MIR 0 262 205 201 122 49 0 chr10 17612439 17612480 -127976808 + (TA)n Simple_repeat Simple_repeat 2 44 0 1919 87 64 0 chr10 17612902 17613167 -127976121 + AluSc SINE Alu 25 306 -3 2564 151 39 5 chr10 17613362 17613774 -127975514 - MSTA LTR MaLR -2 426 1 22 35 0 0 chr10 17614373 17614402 -127974886 + AT_rich Low_complexity Low_complexity 1 29 0 213 121 0 0 chr10 17615478 17615511 -127973777 + (CA)n Simple_repeat Simple_repeat 2 34 0 2074 139 3 0 chr10 17616578 17616872 -127972416 + AluSq SINE Alu 1 295 -18 1958 136 48 0 chr10 17616876 17616998 -127972290 + AluSq SINE Alu 1 116 -197 198 0 0 0 chr10 17616998 17617020 -127972268 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 1958 136 48 0 chr10 17617020 17617192 -127972096 + AluSq SINE Alu 116 309 -4 414 180 126 45 chr10 17618340 17618451 -127970837 + MIR3 SINE MIR 83 202 -6 715 244 5 46 chr10 17619447 17619644 -127969644 - MER3 DNA MER1_type -19 190 2 841 220 35 0 chr10 17619653 17619826 -127969462 - MER5A DNA MER1_type 0 189 11 207 0 0 0 chr10 17621102 17621125 -127968163 + (A)n Simple_repeat Simple_repeat 1 23 0 222 91 0 0 chr10 17622786 17622819 -127966469 + (A)n Simple_repeat Simple_repeat 1 33 0 1907 153 27 0 chr10 17623069 17623369 -127965919 + AluJb SINE Alu 1 308 -4 1728 137 12 0 chr10 17624478 17624733 -127964555 + AluSx SINE Alu 44 301 -11 1097 167 261 29 chr10 17624962 17625207 -127964081 + AluJo SINE Alu 1 302 0 24 0 0 0 chr10 17626946 17626970 -127962318 + AT_rich Low_complexity Low_complexity 1 24 0 447 87 0 29 chr10 17627054 17627123 -127962165 - Alu SINE Alu -5 307 241 1112 145 124 0 chr10 17628163 17628356 -127960932 - AluJo SINE Alu -10 302 86 200 238 0 32 chr10 17628806 17628869 -127960419 + GA-rich Low_complexity Low_complexity 5 65 0 1286 199 63 11 chr10 17630401 17630687 -127958601 - AluJo SINE Alu -11 301 1 889 159 0 0 chr10 17631849 17631981 -127957307 + FLAM_C SINE Alu 1 132 -1 27 0 0 0 chr10 17632614 17632641 -127956647 + AT_rich Low_complexity Low_complexity 1 27 0 198 0 0 0 chr10 17633573 17633595 -127955693 + (A)n Simple_repeat Simple_repeat 1 22 0 805 99 0 0 chr10 17634045 17634156 -127955132 - AluY SINE Alu -3 308 198 2100 130 23 0 chr10 17634161 17634461 -127954827 - AluSx SINE Alu -5 307 1 2033 126 32 0 chr10 17635046 17635331 -127953957 + AluSx SINE Alu 1 294 -18 219 88 0 0 chr10 17636065 17636099 -127953189 + (TG)n Simple_repeat Simple_repeat 1 34 0 193 0 0 86 chr10 17637872 17637907 -127951381 + (GAAA)n Simple_repeat Simple_repeat 2 33 0 22 0 0 0 chr10 17638118 17638140 -127951148 + AT_rich Low_complexity Low_complexity 1 22 0 318 341 75 35 chr10 17638884 17639057 -127950231 + L2 LINE L2 2994 3173 -99 289 281 22 11 chr10 17639528 17639617 -127949671 - MIR3 SINE MIR -36 172 83 484 161 0 0 chr10 17640033 17640120 -127949168 + L1MB8 LINE L1 6083 6169 -9 221 346 63 79 chr10 17641464 17641831 -127947457 + L2 LINE L2 382 742 -2572 2176 129 0 3 chr10 17642879 17643181 -127946107 - AluSx SINE Alu -11 301 1 7777 20 2 8 chr10 17643609 17644468 -127944820 + L1PA4 LINE L1 5300 6153 -2 880 269 121 39 chr10 17645533 17645996 -127943292 + L2 LINE L2 2541 3032 -281 1161 126 12 0 chr10 17646002 17646169 -127943119 + AluSg/x SINE Alu 137 305 -7 213 222 37 25 chr10 17646205 17646286 -127943002 + L2 LINE L2 3081 3162 -151 1335 163 5 0 chr10 17646288 17646497 -127942791 - AluJo SINE Alu -16 296 87 450 288 27 34 chr10 17646501 17646647 -127942641 + L2 LINE L2 3168 3312 -1 411 279 188 49 chr10 17646676 17647425 -127941863 + L2 LINE L2 2369 3278 -35 287 229 12 24 chr10 17648030 17648113 -127941175 + (CATATA)n Simple_repeat Simple_repeat 5 86 0 2316 94 3 0 chr10 17648228 17648526 -127940762 + AluSp SINE Alu 2 300 -13 227 269 30 104 chr10 17649811 17649945 -127939343 + L2 LINE L2 3190 3313 0 2418 240 90 9 chr10 17650092 17650779 -127938509 + MER20B DNA MER1_type 7 749 -34 2150 125 13 0 chr10 17650779 17651083 -127938205 + AluSq SINE Alu 6 313 0 2142 71 0 8 chr10 17651418 17651685 -127937603 + AluY SINE Alu 1 265 -46 264 167 0 0 chr10 17651685 17651739 -127937549 + Alu SINE Alu 238 291 -10 262 254 25 82 chr10 17651781 17651903 -127937385 + L2 LINE L2 3122 3236 -36 298 231 68 82 chr10 17652655 17652802 -127936486 - MIR SINE MIR -24 238 94 1720 189 3 6 chr10 17652940 17653253 -127936035 - AluJb SINE Alu 0 312 1 2077 112 0 3 chr10 17654705 17655023 -127934265 - AluSx SINE Alu 0 317 1 677 210 0 9 chr10 17655819 17656251 -127933037 + CT-rich Low_complexity Low_complexity 1 427 0 731 210 2 0 chr10 17656277 17656798 -127932490 + CT-rich Low_complexity Low_complexity 1 522 0 202 352 32 24 chr10 17658361 17658486 -127930802 - L2 LINE L2 -235 3037 2912 262 108 0 0 chr10 17659146 17659183 -127930105 + (TTCC)n Simple_repeat Simple_repeat 3 39 0 491 227 0 38 chr10 17659183 17659368 -127929920 + CT-rich Low_complexity Low_complexity 1 178 0 731 203 0 8 chr10 17659372 17659495 -127929793 - FLAM_A SINE Alu -11 122 1 228 171 24 134 chr10 17659859 17659941 -127929347 + MLT1H LTR MaLR 477 549 0 5058 210 37 18 chr10 17661817 17662560 -127926728 + L1MC/D LINE L1 3881 4608 -1630 1867 170 0 13 chr10 17662560 17662872 -127926416 - AluJo SINE Alu -4 308 1 5058 210 37 18 chr10 17662872 17663711 -127925577 + L1MC/D LINE L1 4608 5495 -743 391 323 19 4 chr10 17663799 17664062 -127925226 + L1MEc LINE L1 1538 1804 -4592 500 285 104 25 chr10 17664079 17664747 -127924541 + L1MEc LINE L1 1875 2561 -3654 320 345 154 35 chr10 17664747 17665297 -127923991 + L2 LINE L2 2246 2861 -453 2168 112 3 3 chr10 17665416 17665712 -127923576 - AluSx SINE Alu -16 296 1 415 321 41 25 chr10 17665782 17665978 -127923310 - MIR SINE MIR -59 203 5 2053 108 4 0 chr10 17666119 17666398 -127922890 + AluSg SINE Alu 1 280 -30 324 0 0 0 chr10 17666411 17666447 -127922841 + (CA)n Simple_repeat Simple_repeat 1 36 0 493 299 57 15 chr10 17666491 17666691 -127922597 + MIR SINE MIR 11 213 -49 182 174 22 0 chr10 17668019 17668065 -127921223 + CT-rich Low_complexity Low_complexity 3 49 0 2198 105 33 7 chr10 17668898 17669202 -127920086 - AluSp SINE Alu -1 312 1 * 2248 106 0 28 chr10 17669201 17669522 -127919766 - AluSq SINE Alu -1 312 1 235 250 0 0 chr10 17669755 17669807 -127919481 + LTR30 LTR ERV1 1 52 -670 604 143 57 109 chr10 17669807 17670031 -127919257 + LTR12 LTR ERV1 100 285 -429 278 235 0 0 chr10 17670032 17670100 -127919188 + LTR30 LTR ERV1 553 620 -102 723 158 25 0 chr10 17670100 17670220 -127919068 + pTR5 LTR ERV1 45 167 -2271 2142 109 4 0 chr10 17673417 17673692 -127915596 - AluSx SINE Alu -7 305 30 219 368 53 0 chr10 17674315 17674391 -127914897 - L2 LINE L2 -43 3229 3150 675 257 77 57 chr10 17674674 17675075 -127914213 + MLT1I LTR MaLR 1 409 0 1985 119 6 45 chr10 17675285 17675596 -127913692 - AluSx SINE Alu -13 299 1 38 0 0 0 chr10 17675669 17675707 -127913581 + AT_rich Low_complexity Low_complexity 1 38 0 1961 138 3 49 chr10 17676199 17676525 -127912763 + AluSx SINE Alu 1 311 -1 249 83 0 0 chr10 17676597 17676633 -127912655 + (TA)n Simple_repeat Simple_repeat 1 36 0 1325 178 204 3 chr10 17676685 17676989 -127912299 + MLT1A1 LTR MaLR 1 365 0 252 0 0 0 chr10 17677368 17677396 -127911892 + (TAGG)n Simple_repeat Simple_repeat 2 29 0 2280 113 0 0 chr10 17677704 17678015 -127911273 + AluSx SINE Alu 1 311 -1 409 278 52 113 chr10 17678051 17678299 -127910989 + MIR SINE MIR 18 250 -12 392 330 78 10 chr10 17680596 17680802 -127908486 - L1M4 LINE L1 -916 5230 5011 463 228 112 93 chr10 17681639 17681854 -127907434 + MER20 DNA MER1_type 1 219 0 2198 122 0 0 chr10 17682272 17682567 -127906721 + AluSx SINE Alu 1 295 -17 333 314 31 18 chr10 17682618 17682847 -127906441 - L1ME LINE L1 -295 5826 5595 2643 243 6 16 chr10 17682924 17683604 -127905684 - L1MB7 LINE L1 -129 6055 5383 331 296 72 85 chr10 17683872 17683987 -127905301 + MLT1K LTR MaLR 180 295 -293 717 261 101 0 chr10 17683987 17684175 -127905113 + MER63A DNA MER1_type 2 208 -2 331 296 72 85 chr10 17684175 17684447 -127904841 + MLT1K LTR MaLR 295 562 -26 2113 126 10 0 chr10 17686997 17687381 -127901907 + AluSx SINE Alu 1 387 0 23 33 0 0 chr10 17688218 17688248 -127901040 + AT_rich Low_complexity Low_complexity 1 30 0 2245 88 0 10 chr10 17688251 17688547 -127900741 - AluY SINE Alu -18 293 1 219 237 26 13 chr10 17689692 17689768 -127899520 + (TA)n Simple_repeat Simple_repeat 2 78 0 292 255 64 43 chr10 17689775 17689869 -127899419 - MIR SINE MIR -95 113 18 321 254 201 27 chr10 17690125 17690349 -127898939 - L1ME4a LINE L1 -13 6108 5846 2375 82 3 0 chr10 17691066 17691360 -127897928 - AluSp SINE Alu -18 295 1 21 0 0 0 chr10 17691360 17691381 -127897907 + AT_rich Low_complexity Low_complexity 1 21 0 4477 126 20 48 chr10 17691819 17692661 -127896627 + L1MA8 LINE L1 5466 6284 -7 298 302 47 52 chr10 17693834 17693895 -127895393 - MER5A DNA MER1_type -3 186 126 1627 97 39 130 chr10 17693895 17694226 -127895062 + AluSp SINE Alu 1 301 -12 298 302 47 52 chr10 17694226 17694336 -127894952 - MER5A DNA MER1_type -63 126 16 194 269 30 15 chr10 17695853 17695920 -127893368 - L2 LINE L2 -655 2659 2592 419 249 109 24 chr10 17696039 17696204 -127893084 + MER20 DNA MER1_type 1 179 -40 22 0 0 0 chr10 17696754 17696776 -127892512 + AT_rich Low_complexity Low_complexity 1 22 0 1816 151 14 7 chr10 17696779 17697064 -127892224 - AluJb SINE Alu -23 289 3 738 216 28 0 chr10 17697492 17697668 -127891620 - L1MD2 LINE L1 -26 6333 6153 252 0 0 0 chr10 17697668 17697696 -127891592 + (TG)n Simple_repeat Simple_repeat 2 29 0 1569 208 62 20 chr10 17697726 17698164 -127891124 - L1MD1 LINE L1 -160 6342 5887 1870 240 63 21 chr10 17698195 17699128 -127890160 - L1MD1 LINE L1 -743 5663 4751 854 272 36 8 chr10 17699171 17699421 -127889867 + MER76 LTR ERV 432 688 0 4025 243 59 30 chr10 17699426 17699612 -127889676 - L1MD1 LINE L1 -3316 3090 2911 321 89 0 0 chr10 17699612 17699657 -127889631 + (CA)n Simple_repeat Simple_repeat 2 46 0 4025 243 59 30 chr10 17699657 17702184 -127887104 - L1MD1 LINE L1 -3495 2911 273 218 105 26 0 chr10 17702335 17702373 -127886915 + (TA)n Simple_repeat Simple_repeat 2 40 0 254 299 51 29 chr10 17702519 17702656 -127886632 - MIR SINE MIR -57 205 66 208 319 159 6 chr10 17704351 17704508 -127884780 + L2 LINE L2 2698 2878 -436 433 316 65 56 chr10 17704593 17704824 -127884464 + MIR SINE MIR 8 240 -22 201 128 64 21 chr10 17705197 17705244 -127884044 + T-rich Low_complexity Low_complexity 4 52 0 2043 138 3 0 chr10 17705844 17706134 -127883154 + AluSx SINE Alu 1 291 -21 310 232 11 32 chr10 17706159 17706254 -127883034 - L1MC4 LINE L1 -1333 6709 6617 871 116 0 58 chr10 17706256 17706601 -127882687 + (TA)n Simple_repeat Simple_repeat 1 325 0 23 68 0 0 chr10 17706621 17706665 -127882623 + AT_rich Low_complexity Low_complexity 1 44 0 271 319 53 41 chr10 17706910 17707230 -127882058 + L1MEd LINE L1 60 383 -5736 588 296 79 24 chr10 17707299 17707715 -127881573 + L1M4 LINE L1 3725 4163 -1983 90 51 0 6 chr10 17707850 17707913 -127881375 + AT_rich Low_complexity Low_complexity 1 63 -93 186 0 0 81 chr10 17707913 17707950 -127881338 + (TTA)n Simple_repeat Simple_repeat 1 34 0 90 51 0 6 chr10 17707950 17708043 -127881245 + AT_rich Low_complexity Low_complexity 63 156 0 242 243 81 0 chr10 17708055 17708191 -127881097 + L1M4 LINE L1 4329 4475 -1671 1775 183 3 3 chr10 17710097 17710425 -127878863 + AluJo SINE Alu 1 312 0 2154 133 3 0 chr10 17712408 17712709 -127876579 - AluSq SINE Alu -10 303 2 2781 10 0 10 chr10 17713138 17713451 -127875837 - AluYb8 SINE Alu -8 310 1 193 337 45 0 chr10 17713612 17713701 -127875587 - MIR SINE MIR -70 192 100 787 136 19 31 chr10 17714288 17714529 -127874759 + CT-rich Low_complexity Low_complexity 1 238 0 494 287 38 24 chr10 17714823 17715032 -127874256 + HAL1 LINE L1 771 982 -1525 28 48 0 0 chr10 17715032 17715074 -127874214 + AT_rich Low_complexity Low_complexity 1 42 0 1274 271 94 31 chr10 17715090 17715806 -127873482 + HAL1 LINE L1 1622 2382 -125 348 254 232 0 chr10 17715961 17716138 -127873150 + L1ME4a LINE L1 5901 6118 -3 1543 275 112 20 chr10 17716595 17717468 -127871820 - L2 LINE L2 0 3313 2367 2140 125 20 0 chr10 17718551 17718854 -127870434 + AluSg SINE Alu 1 309 -1 325 193 0 0 chr10 17718856 17718913 -127870375 + AluJ/FLAM SINE Alu 1 57 -245 337 267 43 52 chr10 17719174 17719290 -127869998 + L2 LINE L2 3158 3272 0 27 0 0 0 chr10 17720301 17720328 -127868960 + AT_rich Low_complexity Low_complexity 1 27 0 255 259 83 19 chr10 17720610 17720718 -127868570 + MER117 DNA MER1_type 9 123 -74 2302 109 3 0 chr10 17721070 17721373 -127867915 - AluSg1 SINE Alu -1 308 5 1692 161 30 18 chr10 17721539 17721868 -127867420 - MER44D DNA MER2_type -6 603 1 21 0 0 0 chr10 17722055 17722076 -127867212 + AT_rich Low_complexity Low_complexity 1 21 0 2810 174 7 6 chr10 17722165 17722710 -127866578 - L1P LINE L1 -1101 5045 4500 1097 95 6 12 chr10 17722712 17722880 -127866408 + L1PA13 LINE L1 5993 6159 -4 193 311 18 113 chr10 17725434 17725656 -127863632 + L2 LINE L2 1335 1535 -1779 699 297 89 34 chr10 17725666 17726491 -127862797 + L2 LINE L2 1798 3313 0 379 371 81 37 chr10 17726498 17726932 -127862356 + L2 LINE L2 2442 2894 -420 212 248 29 67 chr10 17727073 17727110 -127862178 + L2 LINE L2 3116 3153 -160 1810 181 41 0 chr10 17727110 17727403 -127861885 - AluJb SINE Alu -7 305 1 212 248 29 67 chr10 17727403 17727470 -127861818 + L2 LINE L2 3153 3216 -97 1865 167 10 0 chr10 17728055 17728349 -127860939 + AluSx SINE Alu 1 297 -15 180 0 0 0 chr10 17728913 17728933 -127860355 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 276 329 99 26 chr10 17729246 17729398 -127859890 + MIR SINE MIR 57 219 -43 1137 274 147 35 chr10 17730181 17731070 -127858218 - L2 LINE L2 -6 3307 2334 288 0 0 0 chr10 17731075 17731107 -127858181 + (TCTA)n Simple_repeat Simple_repeat 1 32 0 993 153 6 0 chr10 17731115 17731285 -127858003 - L1PB3 LINE L1 -22 6132 5962 224 212 15 0 chr10 17731328 17731394 -127857894 + (TA)n Simple_repeat Simple_repeat 2 68 0 330 228 38 25 chr10 17731583 17731662 -127857626 - MIR SINE MIR -174 88 9 208 216 0 0 chr10 17732347 17732384 -127856904 + polypurine Low_complexity Low_complexity 4 40 0 1842 132 0 4 chr10 17732792 17733064 -127856224 - AluSx SINE Alu -12 300 30 308 270 10 40 chr10 17734394 17734494 -127854794 - MIR3 SINE MIR -1 207 111 637 259 84 38 chr10 17734503 17734742 -127854546 - MIR SINE MIR -7 255 6 2205 103 0 26 chr10 17735236 17735538 -127853750 + AluY SINE Alu 1 294 -17 221 204 0 0 chr10 17735597 17735641 -127853647 + L2 LINE L2 3268 3311 -2 244 328 92 8 chr10 17735894 17736025 -127853263 - MIR SINE MIR -40 222 81 214 226 258 0 chr10 17736558 17736620 -127852668 - MER5A DNA MER1_type -111 78 1 738 191 15 0 chr10 17736854 17736985 -127852303 - FLAM_C SINE Alu 0 133 1 2021 238 53 29 chr10 17737945 17738606 -127850682 - L1M4 LINE L1 -5851 691 15 931 246 116 34 chr10 17738855 17739233 -127850055 + MLT1I LTR MaLR 1 409 0 23 33 0 0 chr10 17739409 17739439 -127849849 + AT_rich Low_complexity Low_complexity 1 30 0 1571 144 78 11 chr10 17739442 17739713 -127849575 - AluJo SINE Alu -21 291 3 2456 87 0 3 chr10 17739859 17740170 -127849118 + AluY SINE Alu 1 310 -1 2004 133 3 17 chr10 17740976 17741277 -127848011 - AluSx SINE Alu -15 297 1 22 0 0 0 chr10 17741628 17741650 -127847638 + AT_rich Low_complexity Low_complexity 1 22 0 34 42 0 0 chr10 17742854 17742902 -127846386 + AT_rich Low_complexity Low_complexity 1 48 0 186 287 39 94 chr10 17744684 17744970 -127844318 - L2 LINE L2 -79 3234 2965 1426 232 45 51 chr10 17745382 17745822 -127843466 + L1ME LINE L1 4749 5190 -972 1784 155 18 3 chr10 17745822 17746106 -127843182 + AluJb SINE Alu 1 288 -24 1426 232 45 51 chr10 17746106 17746604 -127842684 + L1ME LINE L1 5190 5675 -487 1898 162 29 2 chr10 17746609 17747022 -127842266 + L1M3 LINE L1 5257 5680 -500 694 99 28 21 chr10 17747045 17747186 -127842102 + GA-rich Low_complexity Low_complexity 4 145 0 278 216 68 0 chr10 17747931 17748005 -127841283 + MER5A DNA MER1_type 29 107 -82 314 180 16 0 chr10 17749599 17749660 -127839628 + L2 LINE L2 3252 3313 0 2154 138 3 0 chr10 17749746 17750057 -127839231 + AluSx SINE Alu 1 312 0 2244 118 3 0 chr10 17750751 17751055 -127838233 - AluSx SINE Alu -7 305 1 2222 110 0 0 chr10 17752193 17752485 -127836803 + AluSg SINE Alu 5 296 -14 805 270 53 31 chr10 17753207 17753433 -127835855 + MIR SINE MIR 5 235 -27 317 305 57 9 chr10 17753527 17753632 -127835656 - L2 LINE L2 -20 3293 3184 344 39 0 20 chr10 17753695 17753746 -127835542 + (TG)n Simple_repeat Simple_repeat 2 51 0 180 77 0 0 chr10 17753834 17753860 -127835428 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 296 336 50 8 chr10 17753868 17753987 -127835301 + L3b LINE CR1 1296 1419 -164 1922 73 36 0 chr10 17754443 17754718 -127834570 + L1MA2 LINE L1 6018 6302 -2 32 26 0 0 chr10 17754719 17754758 -127834530 + AT_rich Low_complexity Low_complexity 1 39 0 235 325 17 43 chr10 17755602 17755719 -127833569 - MIR3 SINE MIR -29 179 66 1483 140 21 0 chr10 17757873 17758108 -127831180 + AluJb SINE Alu 40 279 -33 272 247 12 0 chr10 17758108 17758193 -127831095 + GA-rich Low_complexity Low_complexity 2 87 0 2291 99 0 13 chr10 17759351 17759663 -127829625 + AluSx SINE Alu 3 310 -2 539 262 133 14 chr10 17759908 17760118 -127829170 - MIR SINE MIR 0 262 28 31 44 0 0 chr10 17760558 17760603 -127828685 + AT_rich Low_complexity Low_complexity 1 45 0 2733 172 0 25 chr10 17761140 17761704 -127827584 - L1MA6 LINE L1 0 6300 5751 2055 144 66 3 chr10 17761718 17762099 -127827189 + L1MA6 LINE L1 5350 5754 -546 1472 132 0 18 chr10 17762578 17762797 -127826491 + AluSg/x SINE Alu 77 291 -19 516 104 0 0 chr10 17763264 17763331 -127825957 - Alu SINE Alu -242 67 2 887 142 14 0 chr10 17763333 17763474 -127825814 - FRAM SINE Alu -14 162 20 291 257 88 26 chr10 17765119 17765232 -127824056 + MIR3 SINE MIR 41 160 -48 351 259 9 18 chr10 17765321 17765433 -127823855 + MER103 DNA DNA 55 165 -1 319 179 0 18 chr10 17765706 17765762 -127823526 + AluSc SINE Alu 40 94 -205 255 316 40 0 chr10 17766306 17766382 -127822906 - MIR SINE MIR -100 108 30 637 213 8 24 chr10 17767058 17767185 -127822103 + AluSq/x SINE Alu 6 130 -183 295 152 15 15 chr10 17769737 17769803 -127819485 + GA-rich Low_complexity Low_complexity 2 67 0 237 270 178 18 chr10 17770814 17770977 -127818311 + L2 LINE L2 3001 3189 -124 928 185 0 34 chr10 17772628 17772833 -127816455 - AluJb SINE Alu -29 283 86 276 316 53 0 chr10 17773551 17773646 -127815642 + MIR SINE MIR 40 139 -123 180 350 17 0 chr10 17773919 17773979 -127815309 - L2 LINE L2 -76 3196 3136 21 0 0 0 chr10 17776480 17776501 -127812787 + AT_rich Low_complexity Low_complexity 1 21 0 1150 212 3 62 chr10 17776882 17777188 -127812100 - AluJb SINE Alu -5 307 20 342 0 0 0 chr10 17777719 17777757 -127811531 + (TAAA)n Simple_repeat Simple_repeat 1 38 0 2213 98 3 13 chr10 17779521 17779826 -127809462 - AluY SINE Alu -9 302 1 2213 113 0 3 chr10 17779833 17780135 -127809153 - AluSq SINE Alu -12 301 1 261 139 0 0 chr10 17780693 17780736 -127808552 + (T)n Simple_repeat Simple_repeat 1 43 0 564 294 87 14 chr10 17781815 17782033 -127807255 + MIR SINE MIR 2 235 -27 1762 125 10 14 chr10 17782232 17782527 -127806761 + AluSp SINE Alu 1 294 -19 227 349 33 40 chr10 17784134 17784286 -127805002 - MIR SINE MIR -55 207 57 1215 143 0 0 chr10 17785506 17785681 -127803607 - AluSp SINE Alu -11 302 128 330 167 131 24 chr10 17786392 17786476 -127802812 - MIR3 SINE MIR -52 156 64 228 220 60 0 chr10 17787059 17787109 -127802179 + L3b LINE CR1 1282 1334 -249 2888 86 11 6 chr10 17787581 17787943 -127801345 + THE1B LTR MaLR 1 364 0 1536 134 28 146 chr10 17787944 17788368 -127800920 + THE1B-int LTR MaLR 2 375 -1205 478 255 52 68 chr10 17788869 17789061 -127800227 + L2 LINE L2 3123 3311 -2 370 243 87 0 chr10 17789597 17789700 -127799588 + L1ME LINE L1 5547 5658 -463 377 318 87 11 chr10 17789998 17790275 -127799013 - HAL1b LINE L1 -659 689 392 218 297 8 51 chr10 17790276 17790394 -127798894 + CT-rich Low_complexity Low_complexity 2 114 0 * 230 251 0 37 chr10 17790309 17790476 -127798812 + CT-rich Low_complexity Low_complexity 1 160 0 208 392 0 0 chr10 17790488 17790562 -127798726 + polypyrimidine Low_complexity Low_complexity 1 74 0 194 247 13 0 chr10 17790579 17790656 -127798632 + CT-rich Low_complexity Low_complexity 3 80 0 227 321 43 70 chr10 17791422 17791609 -127797679 + L2 LINE L2 3080 3261 -11 24 32 0 0 chr10 17792183 17792214 -127797074 + AT_rich Low_complexity Low_complexity 1 31 0 1254 219 38 22 chr10 17795729 17796048 -127793240 - L1MB8 LINE L1 -6 6172 5849 2001 138 6 6 chr10 17797667 17797979 -127791309 + AluSx SINE Alu 1 312 0 858 218 38 41 chr10 17798303 17798596 -127790692 + L1M4 LINE L1 4143 4434 -1712 319 300 22 67 chr10 17799238 17799418 -127789870 - L2 LINE L2 -200 3072 2901 213 226 16 16 chr10 17800370 17800432 -127788856 + C-rich Low_complexity Low_complexity 3 64 0 9847 46 0 2 chr10 17800638 17801874 -127787414 - L1P LINE L1 -2172 3974 2742 447 222 89 22 chr10 17802320 17802455 -127786833 + MER103 DNA DNA 11 154 -12 293 295 90 0 chr10 17802557 17802679 -127786609 - L3 LINE CR1 -723 854 722 385 276 6 49 chr10 17804640 17804803 -127784485 + L1M4 LINE L1 4903 5058 -1088 12663 54 7 0 chr10 17807685 17809302 -127779986 - L1P LINE L1 -3663 2483 855 255 150 0 0 chr10 17859353 17859393 -127729895 - Alu SINE Alu -261 41 2 757 158 33 0 chr10 17859611 17859731 -127729557 - AluJb SINE Alu -13 299 176 276 163 0 0 chr10 17859750 17859799 -127729489 - AluSc SINE Alu -81 218 170 276 163 0 0 chr10 17859782 17859831 -127729457 - AluSp/q SINE Alu -83 220 172 276 163 0 0 chr10 17859814 17859863 -127729425 - AluSg/x SINE Alu -82 218 170 276 163 0 0 chr10 17859846 17859895 -127729393 - AluSg/x SINE Alu -82 218 170 276 163 0 0 chr10 17859878 17859927 -127729361 - AluSg/x SINE Alu -82 220 172 879 198 23 23 chr10 17859943 17860160 -127729128 - AluJb SINE Alu -93 219 3 333 236 79 0 chr10 17860244 17860371 -127728917 - AluSc SINE Alu 0 299 163 989 179 40 20 chr10 17860485 17860686 -127728602 + AluSc SINE Alu 103 307 -2 1102 62 17 22 chr10 17860692 17860871 -127728417 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 548 256 6 67 chr10 17860919 17861083 -127728205 + MIR SINE MIR 2 155 -107 23 0 0 0 chr10 17862041 17862064 -127727224 + AT_rich Low_complexity Low_complexity 1 23 0 1119 179 44 28 chr10 17862544 17862796 -127726492 - AluJb SINE Alu -15 297 42 738 167 8 16 chr10 17863477 17863603 -127725685 + FLAM_C SINE Alu 2 126 -17 250 308 132 33 chr10 17864464 17864646 -127724642 + MIR SINE MIR 57 256 -6 1120 274 147 35 chr10 17865399 17866288 -127723000 - L2 LINE L2 -6 3307 2334 324 0 0 0 chr10 17866293 17866329 -127722959 + (TCTA)n Simple_repeat Simple_repeat 1 36 0 1089 147 6 0 chr10 17866337 17866507 -127722781 - L1PB3 LINE L1 -22 6132 5962 224 212 15 0 chr10 17866550 17866616 -127722672 + (TA)n Simple_repeat Simple_repeat 1 67 0 326 228 38 25 chr10 17866805 17866884 -127722404 - MIR SINE MIR -174 88 9 208 216 0 0 chr10 17867569 17867606 -127721682 + polypurine Low_complexity Low_complexity 4 40 0 1791 138 0 4 chr10 17868016 17868285 -127721003 - AluSx SINE Alu -15 297 30 307 270 10 40 chr10 17869617 17869717 -127719571 - MIR3 SINE MIR -1 207 111 574 264 84 38 chr10 17869726 17869965 -127719323 - MIR SINE MIR -7 255 6 2174 106 0 26 chr10 17870459 17870761 -127718527 + AluY SINE Alu 1 294 -17 217 204 0 0 chr10 17870820 17870864 -127718424 + L2 LINE L2 3268 3311 -2 234 319 106 0 chr10 17871135 17871248 -127718040 - MIR SINE MIR -57 205 81 214 226 258 0 chr10 17871781 17871843 -127717445 - MER5A DNA MER1_type -111 78 1 790 191 15 0 chr10 17872077 17872208 -127717080 - FLAM_C SINE Alu 0 133 1 2247 241 53 29 chr10 17873168 17873829 -127715459 - L1M4 LINE L1 -5851 691 15 1081 246 116 34 chr10 17874078 17874456 -127714832 + MLT1I LTR MaLR 1 409 0 23 33 0 0 chr10 17874632 17874662 -127714626 + AT_rich Low_complexity Low_complexity 1 30 0 1563 144 78 11 chr10 17874665 17874936 -127714352 - AluJo SINE Alu -21 291 3 2458 87 0 3 chr10 17875082 17875393 -127713895 + AluY SINE Alu 1 310 -1 1996 133 3 17 chr10 17876200 17876501 -127712787 - AluSx SINE Alu -15 297 1 22 0 0 0 chr10 17876852 17876874 -127712414 + AT_rich Low_complexity Low_complexity 1 22 0 34 42 0 0 chr10 17878078 17878126 -127711162 + AT_rich Low_complexity Low_complexity 1 48 0 1679 232 45 51 chr10 17880606 17881046 -127708242 + L1ME LINE L1 4749 5190 -972 1770 155 18 3 chr10 17881046 17881330 -127707958 + AluJb SINE Alu 1 288 -24 1679 232 45 51 chr10 17881330 17881828 -127707460 + L1ME LINE L1 5190 5675 -487 2080 162 29 2 chr10 17881833 17882246 -127707042 + L1M3 LINE L1 5257 5680 -500 350 41 0 20 chr10 17882269 17882318 -127706970 + (GGGAA)n Simple_repeat Simple_repeat 4 51 0 466 111 60 17 chr10 17882524 17882641 -127706647 + GA-rich Low_complexity Low_complexity 4 125 0 281 216 68 0 chr10 17883386 17883460 -127705828 + MER5A DNA MER1_type 29 107 -82 310 180 16 0 chr10 17885054 17885115 -127704173 + L2 LINE L2 3252 3313 0 2139 138 3 0 chr10 17885201 17885512 -127703776 + AluSx SINE Alu 1 312 0 2238 118 3 0 chr10 17886206 17886510 -127702778 - AluSx SINE Alu -7 305 1 2221 110 0 0 chr10 17887648 17887940 -127701348 + AluSg SINE Alu 5 296 -14 810 270 53 31 chr10 17888662 17888888 -127700400 + MIR SINE MIR 5 235 -27 316 305 57 9 chr10 17888982 17889087 -127700201 - L2 LINE L2 -20 3293 3184 344 39 0 20 chr10 17889150 17889201 -127700087 + (TG)n Simple_repeat Simple_repeat 2 51 0 180 77 0 0 chr10 17889289 17889315 -127699973 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 292 336 50 8 chr10 17889323 17889442 -127699846 + L3b LINE CR1 1296 1419 -164 2079 73 36 0 chr10 17889898 17890173 -127699115 + L1MA2 LINE L1 6018 6302 -2 32 26 0 0 chr10 17890174 17890213 -127699075 + AT_rich Low_complexity Low_complexity 1 39 0 220 325 17 43 chr10 17891057 17891174 -127698114 - MIR3 SINE MIR -29 179 66 1483 140 21 0 chr10 17893328 17893563 -127695725 + AluJb SINE Alu 40 279 -33 272 247 12 0 chr10 17893563 17893648 -127695640 + GA-rich Low_complexity Low_complexity 2 87 0 2286 99 0 13 chr10 17894806 17895118 -127694170 + AluSx SINE Alu 3 310 -2 537 262 133 14 chr10 17895363 17895573 -127693715 - MIR SINE MIR 0 262 28 31 44 0 0 chr10 17896013 17896058 -127693230 + AT_rich Low_complexity Low_complexity 1 45 0 3009 172 0 25 chr10 17896595 17897159 -127692129 - L1MA6 LINE L1 0 6300 5751 2241 144 66 3 chr10 17897173 17897554 -127691734 + L1MA6 LINE L1 5350 5754 -546 1461 132 0 18 chr10 17898033 17898252 -127691036 + AluSg/x SINE Alu 79 293 -19 886 237 111 76 chr10 17898529 17898909 -127690379 - MSTD LTR MaLR -3 393 1 2252 108 7 0 chr10 17899069 17899366 -127689922 + AluSp SINE Alu 7 305 -8 2277 119 0 0 chr10 17899925 17900227 -127689061 + AluSx SINE Alu 1 302 -10 255 137 98 0 chr10 17900284 17900335 -127688953 + L2 LINE L2 3217 3272 0 1699 154 32 4 chr10 17900802 17901081 -127688207 - AluJo SINE Alu -25 287 1 2566 49 0 3 chr10 17901421 17901727 -127687561 - AluY SINE Alu -6 305 1 350 283 83 14 chr10 17901834 17901979 -127687309 + MIR SINE MIR 100 254 -8 650 210 90 93 chr10 17902174 17902620 -127686668 + MLT1F1 LTR MaLR 2 537 -30 250 245 21 64 chr10 17902717 17902811 -127686477 + MIR SINE MIR 118 207 -55 2173 118 30 3 chr10 17902898 17903202 -127686086 - AluSx SINE Alu 0 312 1 386 307 63 47 chr10 17903211 17903573 -127685715 + L1MC4a LINE L1 5582 5952 -212 352 267 70 60 chr10 17903913 17904327 -127684961 + L1ME4a LINE L1 5643 6097 -24 272 383 67 28 chr10 17904554 17905014 -127684274 + L2 LINE L2 2233 2710 -604 22 35 0 0 chr10 17905279 17905308 -127683980 + AT_rich Low_complexity Low_complexity 1 29 0 266 276 48 9 chr10 17905570 17905675 -127683613 - MIR SINE MIR -119 143 35 2110 138 0 0 chr10 17906169 17906459 -127682829 - AluSx SINE Alu -17 295 6 855 194 5 0 chr10 17907373 17907761 -127681527 + GA-rich Low_complexity Low_complexity 1 390 0 2265 103 0 0 chr10 17909078 17909369 -127679919 - AluSc SINE Alu -18 291 1 2218 100 0 35 chr10 17909999 17910309 -127678979 + AluSq SINE Alu 1 299 -14 31 0 0 0 chr10 17910515 17910546 -127678742 + AT_rich Low_complexity Low_complexity 1 31 0 195 323 42 31 chr10 17910555 17910651 -127678637 + MIR3 SINE MIR 107 203 -5 460 306 124 39 chr10 17911512 17912075 -127677213 + L2 LINE L2 1682 2292 -1022 1680 156 57 7 chr10 17912160 17912442 -127676846 - AluJb SINE Alu -16 296 1 293 143 0 0 chr10 17914391 17914433 -127674855 - LTR7 LTR ERV1 -408 42 1 182 261 60 97 chr10 17915820 17915954 -127673334 - L2 LINE L2 -1788 1526 1398 515 300 78 40 chr10 17916087 17916434 -127672854 + L1ME4a LINE L1 5302 5661 -460 304 269 81 94 chr10 17916564 17916798 -127672490 + L1ME4a LINE L1 5869 6099 -22 939 92 0 0 chr10 17916811 17916931 -127672357 + L1MA2 LINE L1 6185 6304 0 931 180 87 0 chr10 17918148 17918320 -127670968 + MER5A DNA MER1_type 1 187 -2 4978 68 224 0 chr10 17918320 17918995 -127670293 + LTR12 LTR ERV1 1 826 0 35684 89 29 6 chr10 17919019 17923823 -127665465 + HERV9 LTR ERV1 58 4974 -3425 2118 177 91 77 chr10 17923792 17924717 -127664571 + Harlequin LTR ERV1 842 1720 -5176 * 4714 93 1 15 chr10 17924711 17925364 -127663924 + Harlequin LTR ERV1 7756 8399 0 5928 70 110 0 chr10 17925364 17926108 -127663180 + LTR12 LTR ERV1 1 826 0 210 37 0 0 chr10 17926629 17926656 -127662632 + (TTTA)n Simple_repeat Simple_repeat 4 30 0 1635 201 7 0 chr10 17926658 17926937 -127662351 - AluJo SINE Alu -31 281 1 453 193 23 0 chr10 17927208 17927296 -127661992 - MER5A DNA MER1_type -96 93 4 612 262 12 24 chr10 17927521 17927689 -127661599 - MER5B DNA MER1_type -5 173 8 654 305 47 60 chr10 17928371 17928751 -127660537 - L2 LINE L2 0 3272 2898 315 0 0 0 chr10 17928832 17928867 -127660421 + (CA)n Simple_repeat Simple_repeat 1 35 0 257 0 30 0 chr10 17928928 17928961 -127660327 + (CA)n Simple_repeat Simple_repeat 2 35 0 298 0 48 0 chr10 17929023 17929065 -127660223 + (CA)n Simple_repeat Simple_repeat 2 45 0 1581 196 18 0 chr10 17929136 17929417 -127659871 - AluJb SINE Alu -20 292 7 392 347 99 55 chr10 17931067 17931126 -127658162 - L2 LINE L2 -1 3271 3216 2283 132 35 51 chr10 17931126 17931521 -127657767 - MLT1B LTR MaLR -1 389 1 392 347 99 55 chr10 17931521 17931804 -127657484 - L2 LINE L2 -56 3216 2914 865 205 62 22 chr10 17931832 17932056 -127657232 + MER106A DNA MER1_type 3 235 -1 313 366 113 30 chr10 17932057 17932339 -127656949 - L2 LINE L2 -452 2862 2605 1924 134 39 0 chr10 17932339 17932622 -127656666 + AluSg SINE Alu 1 294 -16 313 366 113 30 chr10 17932622 17932965 -127656323 - L2 LINE L2 -709 2605 2185 5207 95 1 36 chr10 17935708 17936421 -127652867 + LTR12 LTR ERV1 1 688 0 324 314 24 77 chr10 17936431 17936600 -127652688 - MIR SINE MIR -79 183 24 1724 214 55 9 chr10 17938706 17939145 -127650143 - MLT1C LTR MaLR -3 464 6 2220 108 0 3 chr10 17939847 17940143 -127649145 - AluSc SINE Alu -14 295 1 250 299 76 22 chr10 17941283 17941447 -127647841 + MIR SINE MIR 34 201 -61 21 36 0 0 chr10 17941450 17941478 -127647810 + AT_rich Low_complexity Low_complexity 1 28 0 850 143 30 30 chr10 17941667 17941800 -127647488 + FLAM_C SINE Alu 1 133 0 225 329 155 12 chr10 17941813 17941974 -127647314 - MIR SINE MIR -3 259 76 2127 135 0 3 chr10 17942186 17942489 -127646799 - AluSx SINE Alu -10 302 1 1009 178 11 11 chr10 17942936 17943127 -127646161 - AluJo SINE Alu -121 191 1 1856 139 0 0 chr10 17944361 17944628 -127644660 - AluSx SINE Alu -45 267 1 6618 164 37 18 chr10 17945272 17945829 -127643459 - LTR57-int LTR ERVL -4110 1233 688 201 94 0 0 chr10 17945829 17945861 -127643427 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 6618 164 37 18 chr10 17945861 17946513 -127642775 - LTR57-int LTR ERVL -4655 688 1 847 192 24 6 chr10 17946513 17946680 -127642608 - LTR57 LTR ERVL 0 411 242 354 97 0 125 chr10 17946695 17946767 -127642521 - LTR57 LTR ERVL -348 63 1 * 1383 251 35 35 chr10 17946767 17947136 -127642152 - MER45B DNA AcHobo -352 688 320 537 176 64 40 chr10 17947136 17947261 -127642027 + MLT1A2 LTR MaLR 1 128 -246 1899 151 6 22 chr10 17948570 17948882 -127640406 - AluJb SINE Alu -5 307 1 484 370 19 0 chr10 17949438 17949646 -127639642 + MIR SINE MIR 33 244 -18 2089 118 10 7 chr10 17950427 17950731 -127638557 + AluSx SINE Alu 1 305 -7 288 286 166 29 chr10 17951261 17951569 -127637719 + L1ME4a LINE L1 5661 6010 -111 22 30 0 61 chr10 17951934 17951982 -127637306 + AT_rich Low_complexity Low_complexity 1 46 -16 632 103 10 0 chr10 17951982 17952079 -127637209 + L1MA2 LINE L1 6207 6304 0 22 30 0 61 chr10 17952079 17952096 -127637192 + AT_rich Low_complexity Low_complexity 46 62 0 333 0 0 0 chr10 17952303 17952340 -127636948 + (TTA)n Simple_repeat Simple_repeat 3 39 0 2122 132 0 0 chr10 17952516 17952827 -127636461 + AluSx SINE Alu 2 312 0 2582 117 10 18 chr10 17954051 17954437 -127634851 + MER1A DNA MER1_type 147 529 0 364 266 166 0 chr10 17954489 17954628 -127634660 - MIR SINE MIR -4 258 97 2113 117 0 0 chr10 17954713 17955018 -127634270 + AluSx SINE Alu 1 305 0 581 228 169 22 chr10 17955399 17955583 -127633705 - MIR SINE MIR 0 262 52 411 246 140 3 chr10 17956366 17956494 -127632794 - MIR SINE MIR -62 146 12 220 287 180 43 chr10 17956958 17957331 -127631957 + L2 LINE L2 2465 2888 -426 315 243 88 88 chr10 17958617 17958753 -127630535 - MER5B DNA MER1_type -36 153 4 2113 113 24 71 chr10 17959724 17960105 -127629183 + L1PA12 LINE L1 5806 6168 0 413 357 80 4 chr10 17960670 17960919 -127628369 + L3 LINE CR1 143 410 -1167 440 274 91 17 chr10 17960996 17961171 -127628117 + MIR SINE MIR 15 202 -60 450 346 179 16 chr10 17961292 17961801 -127627487 + L3 LINE CR1 634 1225 -352 1078 150 0 0 chr10 17962019 17962179 -127627109 - AluSg/x SINE Alu -16 294 135 327 195 102 59 chr10 17963436 17963554 -127625734 - L2 LINE L2 -4 3268 3146 22 0 0 0 chr10 17965366 17965388 -127623900 + AT_rich Low_complexity Low_complexity 1 22 0 248 208 0 0 chr10 17965428 17965476 -127623812 - L1MC4 LINE L1 -1339 6703 6656 423 308 126 28 chr10 17967147 17967329 -127621959 - MIR3 SINE MIR -7 201 2 208 127 36 0 chr10 17968146 17968201 -127621087 + (TA)n Simple_repeat Simple_repeat 1 57 0 307 177 40 17 chr10 17968220 17968395 -127620893 + (TA)n Simple_repeat Simple_repeat 1 179 0 1955 122 0 78 chr10 17969430 17969765 -127619523 - AluSx SINE Alu -3 309 1 426 304 109 14 chr10 17972119 17972339 -127616949 + MIR SINE MIR 19 259 -3 1130 171 0 0 chr10 17972553 17972740 -127616548 - AluSg/x SINE Alu -8 302 116 180 0 0 0 chr10 17972852 17972872 -127616416 + (TAA)n Simple_repeat Simple_repeat 2 21 0 200 314 14 0 chr10 17973179 17973249 -127616039 + GA-rich Low_complexity Low_complexity 1 71 0 198 375 156 0 chr10 17973952 17974080 -127615208 + L2 LINE L2 3116 3263 -9 448 346 53 14 chr10 17974350 17974633 -127614655 + L1ME2 LINE L1 134 427 -5969 2257 104 0 3 chr10 17975159 17975458 -127613830 + AluSc SINE Alu 1 298 -11 7773 248 74 62 chr10 17975503 17976554 -127612734 + L1ME2 LINE L1 790 1828 -4403 2318 92 0 13 chr10 17976554 17976868 -127612420 + AluSx SINE Alu 1 310 -2 7773 248 74 62 chr10 17976868 17978131 -127611157 + L1ME2 LINE L1 1828 3075 -3156 2314 91 7 0 chr10 17978131 17978428 -127610860 + AluSq SINE Alu 1 299 -14 7773 248 74 62 chr10 17978428 17980409 -127608879 + L1ME2 LINE L1 3075 5146 -1085 2396 59 3 0 chr10 17980409 17980699 -127608589 + AluY SINE Alu 1 291 -20 7773 248 74 62 chr10 17980699 17981139 -127608149 + L1ME2 LINE L1 5146 5579 -652 1638 213 130 0 chr10 17981150 17981550 -127607738 - MER66A LTR ERV1 0 478 27 1949 238 21 37 chr10 17981574 17981921 -127607367 + L1ME2 LINE L1 5609 5945 -288 2275 79 7 3 chr10 17981921 17982213 -127607075 + AluSg SINE Alu 1 293 -17 1949 238 21 37 chr10 17982213 17982433 -127606855 + L1ME2 LINE L1 5945 6167 -66 2269 98 13 0 chr10 17984194 17984501 -127604787 - AluSp SINE Alu -2 311 1 2164 117 7 0 chr10 17984849 17985157 -127604131 + AluSq SINE Alu 1 310 -3 186 304 22 0 chr10 17985199 17985245 -127604043 - MIR SINE MIR -127 81 35 326 211 18 83 chr10 17985426 17985535 -127603753 + MER5A DNA MER1_type 83 184 -5 575 223 105 46 chr10 17986099 17986337 -127602951 + MER112 DNA MER1_type 9 260 0 481 268 0 18 chr10 17987904 17988016 -127601272 - MIR3 SINE MIR -11 197 88 542 219 55 134 chr10 17989094 17989423 -127599865 - L1MC4 LINE L1 0 8042 7740 652 182 28 35 chr10 17990101 17990244 -127599044 + MIR SINE MIR 100 241 -21 588 266 23 12 chr10 17990884 17991057 -127598231 + L1ME LINE L1 20 194 -6202 * 1930 244 48 26 chr10 17991047 17991737 -127597551 + L1ME LINE L1 663 1367 -5029 601 258 56 48 chr10 17991724 17991976 -127597312 + L1ME1 LINE L1 5850 6103 -63 * 3074 163 14 64 chr10 17992961 17993613 -127595675 - L1MB8 LINE L1 -109 6069 5451 1862 173 7 13 chr10 17993616 17993922 -127595366 - AluJb SINE Alu -8 304 1 5767 213 25 14 chr10 17993953 17995402 -127593886 - L1MB8 LINE L1 -983 5163 3700 209 226 0 19 chr10 17996447 17996500 -127592788 + A-rich Low_complexity Low_complexity 2 53 0 301 233 0 0 chr10 17996532 17996592 -127592696 + AluJ/FLAM SINE Alu 1 60 -242 377 249 63 91 chr10 17996653 17996874 -127592414 + L1ME LINE L1 3165 3379 -2836 233 281 111 46 chr10 17997053 17997441 -127591847 + L1ME LINE L1 3574 3986 -2229 2425 83 3 0 chr10 17997525 17997826 -127591462 - AluSp SINE Alu -11 302 1 309 267 86 76 chr10 17997840 17997945 -127591343 + MIR SINE MIR 5 110 -152 212 267 188 10 chr10 17998170 17998271 -127591017 - L2 LINE L2 0 3272 3154 1286 236 184 38 chr10 17998345 17998976 -127590312 + MER20B DNA MER1_type 1 723 -60 263 333 35 44 chr10 17999021 17999135 -127590153 - L2 LINE L2 -194 3078 2966 376 241 117 29 chr10 17999139 17999154 -127590134 + L1ME LINE L1 5514 5526 -664 2403 110 0 0 chr10 17999154 17999464 -127589824 - AluSx SINE Alu -2 310 1 376 241 117 29 chr10 17999464 17999585 -127589703 + L1ME LINE L1 5526 5662 -528 420 301 43 0 chr10 17999589 17999775 -127589513 + L1ME LINE L1 5698 5891 -299 458 247 86 84 chr10 18000628 18001006 -127588282 + MLT1I LTR MaLR 27 378 -31 255 61 0 0 chr10 18002151 18002184 -127587104 + (CAT)n Simple_repeat Simple_repeat 1 33 0 199 392 98 0 chr10 18002235 18002378 -127586910 + L2 LINE L2 2738 2894 -420 209 343 27 0 chr10 18002672 18002745 -127586543 + L2 LINE L2 3239 3313 0 234 221 132 0 chr10 18002776 18002844 -127586444 - MIR SINE MIR -105 157 81 2202 119 0 10 chr10 18003316 18003619 -127585669 - AluSx SINE Alu -12 300 1 240 209 0 0 chr10 18005874 18005917 -127583371 + MIR SINE MIR 105 147 -61 21 57 0 0 chr10 18005977 18006012 -127583276 + AT_rich Low_complexity Low_complexity 1 35 0 186 376 64 18 chr10 18006303 18006412 -127582876 - MIR SINE MIR -65 143 30 601 288 126 0 chr10 18006842 18007040 -127582248 + MIR SINE MIR 37 259 -3 185 288 17 0 chr10 18007058 18007117 -127582171 + MIR SINE MIR 203 262 0 21 57 0 0 chr10 18007146 18007181 -127582107 + AT_rich Low_complexity Low_complexity 1 35 0 2152 112 3 0 chr10 18007304 18007589 -127581699 + AluSp SINE Alu 1 286 -27 294 50 0 0 chr10 18007589 18007629 -127581659 + (CATA)n Simple_repeat Simple_repeat 2 41 0 226 224 60 15 chr10 18008065 18008132 -127581156 + MIR SINE MIR 69 138 -70 252 234 62 16 chr10 18008223 18008287 -127581001 - MER5A DNA MER1_type -120 69 3 2414 84 0 0 chr10 18010046 18010344 -127578944 - AluSc SINE Alu -11 298 1 2239 109 3 0 chr10 18011544 18011855 -127577433 - AluSx SINE Alu 0 312 1 1325 278 26 11 chr10 18013491 18013923 -127575365 + L1MC5 LINE L1 5297 5737 -597 1254 169 65 26 chr10 18013925 18014156 -127575132 + AluJb SINE Alu 3 242 -70 840 290 95 35 chr10 18014198 18015265 -127574023 + L1MC5 LINE L1 5721 6831 -977 575 263 11 60 chr10 18015418 18015703 -127573585 + L1MC5 LINE L1 6963 7233 -728 313 269 147 0 chr10 18015824 18015980 -127573308 + L1MC5 LINE L1 7292 7470 -491 1012 129 7 0 chr10 18015988 18016143 -127573145 + MER41B LTR ERV1 480 635 0 481 169 22 0 chr10 18016143 18016232 -127573056 + MER41B-int LTR ERV1 1 91 -5855 * 1461 114 38 0 chr10 18016228 18016438 -127572850 + MER41B-int LTR ERV1 5729 5946 0 3613 134 0 2 chr10 18016441 18016986 -127572302 + MER41B LTR ERV1 4 547 -88 262 260 21 31 chr10 18017622 18017718 -127571570 + L1ME LINE L1 658 752 -5453 1157 274 61 31 chr10 18017915 18018525 -127570763 + L1ME LINE L1 1121 1748 -4648 3837 159 45 46 chr10 18018542 18019454 -127569834 + L1MA9 LINE L1 4204 5114 -1032 5291 134 28 52 chr10 18019458 18020533 -127568755 + L1MA9 LINE L1 5264 6312 0 2094 270 122 17 chr10 18020579 18021942 -127567346 + L1ME LINE L1 2544 4049 -2166 873 304 41 37 chr10 18021973 18022494 -127566794 + MLT1H1 LTR MaLR 32 549 0 1548 257 104 12 chr10 18022513 18023292 -127565996 + L1ME LINE L1 4064 4914 -1301 1927 168 0 9 chr10 18023647 18023962 -127565326 + AluJb SINE Alu 1 312 0 504 287 42 42 chr10 18025808 18026024 -127563264 + MIR SINE MIR 13 228 -34 289 323 19 92 chr10 18026200 18026334 -127562954 + MIR SINE MIR 21 163 -99 1947 151 0 0 chr10 18026334 18026667 -127562621 - AluSx SINE Alu 0 333 1 2144 130 0 34 chr10 18026676 18026998 -127562290 - AluSx SINE Alu -1 311 1 289 323 19 92 chr10 18026998 18027112 -127562176 + MIR SINE MIR 171 261 -1 358 207 47 18 chr10 18028778 18028893 -127560395 + (TA)n Simple_repeat Simple_repeat 2 125 -50 2077 108 21 0 chr10 18028893 18029181 -127560107 - AluSg SINE Alu -16 294 1 358 207 47 18 chr10 18029181 18029234 -127560054 + (TA)n Simple_repeat Simple_repeat 125 175 0 317 265 60 50 chr10 18029793 18029993 -127559295 + Charlie7 DNA MER1_type 59 260 -2352 2231 110 0 0 chr10 18030083 18030375 -127558913 + AluSx SINE Alu 1 292 -20 26 30 0 0 chr10 18030375 18030408 -127558880 + AT_rich Low_complexity Low_complexity 1 33 0 1914 103 22 7 chr10 18030422 18030695 -127558593 + AluSx SINE Alu 23 299 -13 212 209 100 73 chr10 18030696 18030806 -127558482 - MIR SINE MIR -91 171 59 731 267 30 45 chr10 18030872 18031209 -127558079 + Charlie7 DNA MER1_type 310 641 -1971 762 249 126 40 chr10 18031296 18031572 -127557716 + Charlie7 DNA MER1_type 800 1128 -1484 2598 49 0 0 chr10 18031572 18031876 -127557412 - AluY SINE Alu -6 305 2 762 249 126 40 chr10 18031876 18032029 -127557259 + Charlie7 DNA MER1_type 1128 1266 -1346 850 236 33 9 chr10 18032216 18032428 -127556860 - MIR SINE MIR -44 218 2 246 62 0 0 chr10 18032457 18032489 -127556799 + (TG)n Simple_repeat Simple_repeat 2 33 0 570 367 47 13 chr10 18032526 18032973 -127556315 + L1ME LINE L1 4910 5371 -844 332 307 63 24 chr10 18033014 18033219 -127556069 + L1ME LINE L1 5447 5659 -531 277 298 50 8 chr10 18033258 18033379 -127555909 + MLT1J LTR MaLR 5 130 -381 2201 118 17 0 chr10 18034607 18034903 -127554385 - AluSx SINE Alu -11 301 1 283 292 25 25 chr10 18035310 18035430 -127553858 + L1ME LINE L1 5507 5626 -495 2095 114 28 0 chr10 18035722 18036011 -127553277 + AluSx SINE Alu 1 297 -15 22 35 0 0 chr10 18036205 18036234 -127553054 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr10 18036610 18036631 -127552657 + AT_rich Low_complexity Low_complexity 1 21 0 450 253 109 35 chr10 18036860 18037034 -127552254 + MIR SINE MIR 38 224 -38 2218 117 3 0 chr10 18037064 18037373 -127551915 + AluSx SINE Alu 1 310 -2 216 227 0 91 chr10 18037467 18037533 -127551755 + L2 LINE L2 3252 3311 -2 256 330 21 21 chr10 18037739 18037833 -127551455 - MIR SINE MIR -86 122 29 2330 106 0 0 chr10 18039042 18039345 -127549943 + AluSx SINE Alu 1 303 -9 439 139 47 0 chr10 18040958 18041044 -127548244 + MER53 DNA DNA 6 95 -94 1575 87 5 28 chr10 18041446 18041664 -127547624 - AluSx SINE Alu -3 307 95 708 66 0 0 chr10 18041719 18041810 -127547478 - AluSx SINE Alu -221 91 1 267 326 76 0 chr10 18041880 18041972 -127547316 + MIR SINE MIR 31 129 -133 1773 135 29 4 chr10 18042513 18042817 -127546471 - AluSx SINE Alu 0 311 1 2147 105 51 0 chr10 18043458 18043754 -127545534 + AluSq SINE Alu 1 311 -2 3021 28 0 3 chr10 18045426 18045787 -127543501 + L1PA4 LINE L1 5793 6152 -3 191 381 125 6 chr10 18045945 18046105 -127543183 + L3 LINE CR1 67 245 -1332 291 275 64 28 chr10 18046166 18046275 -127543013 - L2 LINE L2 -146 3126 3014 2568 61 0 0 chr10 18048497 18048808 -127540480 - AluY SINE Alu 0 311 1 2094 145 0 0 chr10 18048908 18049212 -127540076 - AluSx SINE Alu -8 304 1 246 232 10 20 chr10 18049264 18049363 -127539925 + (CATATA)n Simple_repeat Simple_repeat 1 98 0 570 151 0 0 chr10 18051235 18051341 -127537947 + CT-rich Low_complexity Low_complexity 1 106 0 1721 153 0 31 chr10 18051341 18051635 -127537653 - AluJo SINE Alu -7 305 21 737 272 62 25 chr10 18052254 18052497 -127536791 + MIR SINE MIR 2 253 -9 1317 155 12 0 chr10 18052831 18053083 -127536205 + L1MA4 LINE L1 5994 6248 -52 27 0 0 0 chr10 18053084 18053111 -127536177 + AT_rich Low_complexity Low_complexity 1 27 0 917 187 14 147 chr10 18054265 18054687 -127534601 + L1 LINE L1 4914 5279 -867 2374 43 0 0 chr10 18055125 18055431 -127533857 + AluY SINE Alu 2 307 0 1167 202 4 4 chr10 18055501 18055744 -127533544 - L1ME1 LINE L1 -269 5897 5655 838 178 43 12 chr10 18055733 18056001 -127533287 - L1ME1 LINE L1 -723 5443 5170 * 960 202 39 53 chr10 18056009 18056291 -127532997 + L1ME1 LINE L1 5885 6162 -4 303 258 374 22 chr10 18057307 18057489 -127531799 + MIR SINE MIR 16 261 -1 2288 71 0 0 chr10 18058049 18058371 -127530917 + AluY SINE Alu 1 322 0 297 75 0 0 chr10 18059033 18059073 -127530215 + (GA)n Simple_repeat Simple_repeat 1 40 0 181 325 134 75 chr10 18059153 18059481 -127529807 - L2 LINE L2 -348 2966 2659 1783 100 0 0 chr10 18059481 18059711 -127529577 - AluSg SINE Alu -31 279 50 181 325 134 75 chr10 18059711 18059856 -127529432 - L2 LINE L2 -655 2659 2524 2301 108 0 22 chr10 18059856 18060170 -127529118 + AluSx SINE Alu 1 307 -5 181 325 134 75 chr10 18060170 18060283 -127529005 - L2 LINE L2 -790 2524 2344 418 230 16 0 chr10 18060401 18060505 -127528783 + MER5A DNA MER1_type 4 109 -80 923 255 117 44 chr10 18060642 18061183 -127528105 - HAL1 LINE L1 -1293 1214 635 2065 96 36 23 chr10 18061630 18061932 -127527356 + AluSx SINE Alu 1 306 -6 2033 130 9 41 chr10 18064118 18064433 -127524855 - AluSg SINE Alu -4 306 2 271 336 67 8 chr10 18064536 18064655 -127524633 - L2 LINE L2 -5 3267 3142 466 194 229 21 chr10 18065094 18065238 -127524050 - L1MDb LINE L1 -4626 1780 1607 2168 113 3 0 chr10 18065238 18065540 -127523748 - AluSc SINE Alu -6 303 1 906 184 3 30 chr10 18065557 18065811 -127523477 - L1MDa LINE L1 -4933 1473 1228 422 110 35 179 chr10 18065806 18065951 -127523337 + L1MDa LINE L1 1457 1580 -4826 * 2338 217 104 25 chr10 18066007 18067059 -127522229 - L1MDb LINE L1 -5187 1219 8 517 170 107 27 chr10 18067305 18067417 -127521871 - L2 LINE L2 0 3313 3193 2025 106 11 7 chr10 18069046 18069328 -127519960 + AluSx SINE Alu 1 283 -29 321 0 25 0 chr10 18069328 18069368 -127519920 + (CAAAA)n Simple_repeat Simple_repeat 2 60 0 1100 147 5 5 chr10 18071458 18071656 -127517632 - L1MB3 LINE L1 0 6183 5986 2014 171 5 13 chr10 18071658 18072043 -127517245 - L1MB3 LINE L1 -295 5888 5507 22 80 0 0 chr10 18072718 18072768 -127516520 + AT_rich Low_complexity Low_complexity 1 50 0 4468 175 34 10 chr10 18073556 18074458 -127514830 - L1MB7 LINE L1 -7 6177 5254 207 100 0 0 chr10 18075076 18075106 -127514182 + (TG)n Simple_repeat Simple_repeat 1 30 0 307 68 23 0 chr10 18075137 18075181 -127514107 - MADE1 DNA Mariner 0 80 36 414 125 111 0 chr10 18075214 18075286 -127514002 - MADE1 DNA Mariner 0 80 1 22 80 0 0 chr10 18075768 18075818 -127513470 + AT_rich Low_complexity Low_complexity 1 50 0 539 305 176 0 chr10 18075865 18076052 -127513236 - MIR SINE MIR -28 234 15 24 77 0 0 chr10 18078603 18078655 -127510633 + AT_rich Low_complexity Low_complexity 1 52 0 2009 99 39 18 chr10 18079018 18079301 -127509987 + AluSx SINE Alu 1 289 -23 2181 126 0 0 chr10 18080314 18080615 -127508673 - AluSx SINE Alu -11 301 1 285 272 204 0 chr10 18080705 18080896 -127508392 + L1MC4a LINE L1 5730 5959 -1849 203 0 0 36 chr10 18083014 18083042 -127506246 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 23 0 0 0 chr10 18083167 18083190 -127506098 + AT_rich Low_complexity Low_complexity 1 23 0 26 30 0 0 chr10 18083613 18083646 -127505642 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr10 18084341 18084362 -127504926 + AT_rich Low_complexity Low_complexity 1 21 0 2344 90 0 7 chr10 18084541 18084851 -127504437 - AluSg1 SINE Alu -1 308 1 192 40 0 0 chr10 18086328 18086353 -127502935 + (A)n Simple_repeat Simple_repeat 1 25 0 980 105 8 0 chr10 18086508 18086641 -127502647 + AluSq/x SINE Alu 3 136 -177 1452 158 0 0 chr10 18086641 18086862 -127502426 + AluSx SINE Alu 1 221 -91 19560 34 2 1 chr10 18087445 18090612 -127498676 + L1PA4 LINE L1 2983 6154 -1 202 289 0 0 chr10 18091192 18091237 -127498051 + L2 LINE L2 3136 3180 -92 499 266 70 0 chr10 18091425 18091553 -127497735 + MIR SINE MIR 55 191 -71 1763 166 3 0 chr10 18092102 18092385 -127496903 + AluJo SINE Alu 1 284 -28 30 0 0 0 chr10 18092385 18092415 -127496873 + AT_rich Low_complexity Low_complexity 1 30 0 2129 119 73 14 chr10 18092552 18092896 -127496392 + THE1B LTR MaLR 1 364 0 210 192 61 131 chr10 18093176 18093275 -127496013 - MIR SINE MIR -78 130 34 244 352 16 0 chr10 18095053 18095178 -127494110 - L1M4 LINE L1 -1988 4158 4032 279 0 0 0 chr10 18095192 18095223 -127494065 + (TG)n Simple_repeat Simple_repeat 2 32 0 1120 235 167 51 chr10 18095223 18095695 -127493593 + MER76 LTR ERV 162 688 0 448 259 0 0 chr10 18095848 18095960 -127493328 - HAL1b LINE L1 -659 689 578 246 328 86 0 chr10 18095966 18096094 -127493194 - HAL1b LINE L1 -1110 238 100 1002 267 73 50 chr10 18096100 18096456 -127492832 + L1ME1 LINE L1 1242 1588 -4808 892 133 0 15 chr10 18096456 18096591 -127492697 + FLAM_C SINE Alu 1 133 0 1002 267 73 50 chr10 18096591 18097074 -127492214 + L1ME1 LINE L1 1588 2100 -4296 1374 226 92 68 chr10 18097185 18097786 -127491502 + L1ME1 LINE L1 5605 6219 -16 2187 102 34 0 chr10 18097849 18098143 -127491145 - AluSg SINE Alu -6 304 1 307 167 30 0 chr10 18099204 18099270 -127490018 - L1MB7 LINE L1 0 6184 6117 1989 141 0 17 chr10 18101255 18101582 -127487706 - AluSx SINE Alu 0 322 1 300 27 0 0 chr10 18101794 18101831 -127487457 + (CA)n Simple_repeat Simple_repeat 2 38 0 2102 146 0 0 chr10 18102475 18102777 -127486511 + AluSx SINE Alu 2 303 -9 25 31 0 0 chr10 18102817 18102849 -127486439 + AT_rich Low_complexity Low_complexity 1 32 0 33 80 0 0 chr10 18103585 18103660 -127485628 + AT_rich Low_complexity Low_complexity 1 75 0 356 326 80 71 chr10 18103674 18104097 -127485191 + L3b LINE CR1 1149 1575 -8 2310 94 7 0 chr10 18104340 18104638 -127484650 + AluSq SINE Alu 2 301 -12 433 314 72 43 chr10 18105110 18105387 -127483901 + MLT1J LTR MaLR 25 309 -202 311 311 37 44 chr10 18105449 18105584 -127483704 + L2 LINE L2 3139 3272 0 856 289 73 74 chr10 18105923 18106488 -127482800 + MLT1K LTR MaLR 2 565 -23 247 265 165 9 chr10 18106947 18107122 -127482166 + L1ME LINE L1 5373 5567 -554 289 282 45 18 chr10 18107377 18107487 -127481801 + HAL1b LINE L1 1227 1339 -9 2186 108 0 3 chr10 18107510 18107796 -127481492 - AluSg SINE Alu -24 286 2 44 35 0 0 chr10 18108486 18108544 -127480744 + AT_rich Low_complexity Low_complexity 1 58 0 610 261 43 0 chr10 18109036 18109197 -127480091 + MIR SINE MIR 38 205 -57 6378 39 22 0 chr10 18109350 18110170 -127479118 + L1PA5 LINE L1 5342 6178 0 411 318 50 31 chr10 18110174 18110295 -127478993 + L1ME4a LINE L1 5530 5647 -474 2277 178 95 28 chr10 18110295 18110768 -127478520 + MLT1D LTR MaLR 1 505 0 411 318 50 31 chr10 18110768 18111005 -127478283 + L1ME4a LINE L1 5647 5895 -226 311 350 19 25 chr10 18111127 18111284 -127478004 + L2 LINE L2 3158 3313 0 22 0 0 0 chr10 18111356 18111378 -127477910 + AT_rich Low_complexity Low_complexity 1 22 0 610 269 32 76 chr10 18111559 18111808 -127477480 - L2 LINE L2 0 3313 3076 28 86 0 0 chr10 18112039 18112109 -127477179 + AT_rich Low_complexity Low_complexity 1 70 0 201 239 45 30 chr10 18112404 18112471 -127476817 - L3 LINE CR1 -64 1513 1446 247 183 164 67 chr10 18112503 18112607 -127476681 - L2 LINE L2 0 3313 3200 1006 280 69 25 chr10 18114893 18115511 -127473777 - L2 LINE L2 -85 3228 2579 581 299 108 20 chr10 18116178 18116429 -127472859 - L2 LINE L2 -705 2609 2337 6440 201 42 9 chr10 18116873 18117162 -127472126 + L1PA16 LINE L1 3879 4157 -2009 2103 96 4 0 chr10 18117162 18117434 -127471854 + AluSx SINE Alu 1 273 -39 6440 201 42 9 chr10 18117434 18118731 -127470557 + L1PA16 LINE L1 4157 5537 -629 2204 112 3 10 chr10 18118731 18119045 -127470243 + AluSq SINE Alu 1 312 -1 6440 201 42 9 chr10 18119045 18119697 -127469591 + L1PA16 LINE L1 5537 6166 0 786 271 105 90 chr10 18120724 18121258 -127468030 + LTR67 LTR ERVL 3 544 -13 4350 167 52 23 chr10 18121658 18121833 -127467455 + L1MB4 LINE L1 5215 5384 -796 2432 84 0 3 chr10 18121833 18122141 -127467147 + AluSq SINE Alu 3 309 -4 4350 167 52 23 chr10 18122141 18122907 -127466381 + L1MB4 LINE L1 5384 6180 0 206 220 45 71 chr10 18123033 18123103 -127466185 + MIR SINE MIR 2 83 -125 413 342 125 20 chr10 18123645 18123949 -127465339 - L2 LINE L2 -437 2877 2542 409 158 49 0 chr10 18124696 18124778 -127464510 + L2 LINE L2 3224 3309 -4 208 232 158 37 chr10 18124906 18124988 -127464300 - MIR SINE MIR -1 261 170 5312 133 34 15 chr10 18126451 18127323 -127461965 - MER4D LTR ERV1 0 903 15 239 284 222 12 chr10 18127698 18127779 -127461509 + MIR SINE MIR 49 146 -62 338 281 240 29 chr10 18129606 18129848 -127459440 - L3 LINE CR1 -7 1570 1278 1073 100 7 0 chr10 18129849 18129989 -127459299 + AluSq/x SINE Alu 1 141 -171 2125 108 7 0 chr10 18129994 18130282 -127459006 + AluSq SINE Alu 1 290 -23 337 294 168 28 chr10 18130320 18130534 -127458754 + MIR SINE MIR 14 257 -5 273 141 8 6 chr10 18131124 18131246 -127458042 + AluSp SINE Alu 121 322 0 671 200 212 0 chr10 18131368 18131538 -127457750 - MER3 DNA MER1_type -3 206 1 2120 128 17 0 chr10 18131871 18132168 -127457120 - AluSx SINE Alu -10 302 1 329 238 19 6 chr10 18133133 18133293 -127455995 + (TA)n Simple_repeat Simple_repeat 1 162 0 207 139 0 0 chr10 18133691 18133727 -127455561 + (CA)n Simple_repeat Simple_repeat 2 37 0 21 0 0 0 chr10 18133967 18133988 -127455300 + AT_rich Low_complexity Low_complexity 1 21 0 1631 153 4 4 chr10 18134978 18135226 -127454062 - AluSx SINE Alu -64 248 1 434 271 0 0 chr10 18136123 18136208 -127453080 + AluJ/FLAM SINE Alu 7 91 -221 297 0 0 0 chr10 18136210 18136243 -127453045 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 1147 133 6 6 chr10 18136250 18136423 -127452865 + FRAM SINE Alu 1 169 -7 477 76 0 0 chr10 18136926 18136992 -127452296 + (GA)n Simple_repeat Simple_repeat 1 66 0 400 296 174 10 chr10 18137536 18137732 -127451556 - MIR SINE MIR -7 255 28 1487 191 21 32 chr10 18137804 18138087 -127451201 - AluJo SINE Alu -22 290 11 22 0 0 0 chr10 18138343 18138365 -127450923 + AT_rich Low_complexity Low_complexity 1 22 0 27 0 0 0 chr10 18138415 18138442 -127450846 + AT_rich Low_complexity Low_complexity 1 27 0 862 192 0 30 chr10 18139161 18139328 -127449960 - MER5A DNA MER1_type -26 163 2 1640 176 14 20 chr10 18140937 18141232 -127448056 + AluJb SINE Alu 4 296 -16 2170 81 7 0 chr10 18141360 18141631 -127447657 - AluSq SINE Alu -28 285 13 614 242 163 19 chr10 18142378 18142593 -127446695 + MIR SINE MIR 5 250 -12 2094 125 17 0 chr10 18142758 18143054 -127446234 + AluSx SINE Alu 1 301 -11 23 0 0 0 chr10 18143647 18143670 -127445618 + AT_rich Low_complexity Low_complexity 1 23 0 3000 109 5 9 chr10 18143932 18144025 -127445263 + L1PA13 LINE L1 5734 5826 -337 2356 87 10 0 chr10 18144025 18144323 -127444965 + AluSx SINE Alu 1 301 -11 3000 109 5 9 chr10 18144323 18144661 -127444627 + L1PA13 LINE L1 5826 6163 0 273 57 0 0 chr10 18144831 18144866 -127444422 + (A)n Simple_repeat Simple_repeat 1 35 0 2347 103 79 0 chr10 18145500 18145829 -127443459 + MER1A DNA MER1_type 175 529 0 2372 104 0 0 chr10 18146004 18146313 -127442975 - AluSc SINE Alu 0 309 1 2950 159 11 0 chr10 18146888 18147346 -127441942 - L1PA16 LINE L1 -5 6161 5699 330 262 58 107 chr10 18147753 18147959 -127441329 + L2 LINE L2 3118 3313 0 264 184 92 40 chr10 18147981 18148057 -127441231 + MIR SINE MIR 175 254 -8 391 208 38 47 chr10 18148118 18148224 -127441064 - L2 LINE L2 -37 3276 3172 1563 152 42 8 chr10 18148257 18148520 -127440768 + AluJo SINE Alu 1 272 -40 243 0 0 0 chr10 18148526 18148553 -127440735 + (TC)n Simple_repeat Simple_repeat 2 28 0 2401 70 0 10 chr10 18148636 18148950 -127440338 + AluY SINE Alu 1 311 0 227 317 61 72 chr10 18149598 18149778 -127439510 + MIR SINE MIR 32 209 -53 1427 155 88 20 chr10 18150568 18150819 -127438469 - AluJb SINE Alu -22 290 23 311 300 53 101 chr10 18153387 18153764 -127435524 + L1M2 LINE L1 778 1136 -5713 883 56 0 0 chr10 18154985 18155092 -127434196 - AluSg/x SINE Alu -14 298 192 2199 120 0 0 chr10 18157036 18157328 -127431960 - AluSx SINE Alu -20 292 1 1996 128 4 0 chr10 18158181 18158495 -127430793 - AluSx SINE Alu 0 315 1 436 322 91 14 chr10 18159507 18159715 -127429573 - MIR SINE MIR -28 234 11 21 36 0 0 chr10 18161954 18161982 -127427306 + AT_rich Low_complexity Low_complexity 1 28 0 853 197 0 0 chr10 18162103 18162240 -127427048 - AluJo SINE Alu -16 296 160 859 155 27 7 chr10 18162301 18162449 -127426839 - AluJo SINE Alu -161 151 1 1825 187 0 0 chr10 18163063 18163362 -127425926 + AluSx SINE Alu 1 299 -13 298 238 0 0 chr10 18163426 18163489 -127425799 - MER94 DNA DNA -11 123 61 21 0 0 0 chr10 18163837 18163858 -127425430 + AT_rich Low_complexity Low_complexity 1 21 0 1828 129 0 0 chr10 18163978 18164233 -127425055 + AluSx SINE Alu 42 296 -16 1078 154 85 0 chr10 18164240 18164428 -127424860 + L1PA16 LINE L1 5958 6161 -5 863 179 20 0 chr10 18165042 18165193 -127424095 + MLT1A1 LTR MaLR 3 156 -209 1647 188 3 11 chr10 18165193 18165514 -127423774 + AluJb SINE Alu 1 319 0 1371 165 18 33 chr10 18165516 18165788 -127423500 + AluJo SINE Alu 21 288 -24 1242 155 24 9 chr10 18165788 18166001 -127423287 + MLT1A1 LTR MaLR 150 365 0 2144 169 15 40 chr10 18166117 18166439 -127422849 - MLT1B LTR MaLR 0 390 78 2179 131 3 0 chr10 18166439 18166737 -127422551 - AluSx SINE Alu -13 299 1 2144 169 15 40 chr10 18166737 18166811 -127422477 - MLT1B LTR MaLR -312 78 4 189 0 0 0 chr10 18166968 18166989 -127422299 + (T)n Simple_repeat Simple_repeat 1 21 0 294 229 135 94 chr10 18167210 18167306 -127421982 - L2 LINE L2 -36 3236 3137 360 289 40 83 chr10 18167680 18167957 -127421331 - L1M4b LINE L1 -5280 1579 1315 216 0 0 0 chr10 18168546 18168570 -127420718 + (TG)n Simple_repeat Simple_repeat 2 25 0 423 162 68 0 chr10 18168608 18168682 -127420606 + Tigger5 DNA MER2_type 1 79 -2244 239 264 0 0 chr10 18168691 18168744 -127420544 + Tigger5 DNA MER2_type 2271 2323 0 * 369 265 162 43 chr10 18168742 18168927 -127420361 - MLT1G1 LTR MaLR 0 567 361 611 269 72 38 chr10 18169004 18169296 -127419992 - MLT1G1 LTR MaLR -314 235 1 250 276 0 0 chr10 18169314 18169372 -127419916 + Tigger5 DNA MER2_type 21 78 -2245 2018 125 26 0 chr10 18169496 18169799 -127419489 + AluSq SINE Alu 1 311 -2 1028 192 44 125 chr10 18169927 18170312 -127418976 - MLT1A2 LTR MaLR -6 368 15 308 321 9 0 chr10 18170314 18170423 -127418865 + L1M4 LINE L1 3646 3755 -2391 1218 320 62 2 chr10 18170428 18170866 -127418422 - LTR16B LTR ERVL 0 464 1 424 304 77 66 chr10 18170926 18171026 -127418262 + L1M4 LINE L1 3796 3893 -2253 1535 181 0 87 chr10 18171026 18171358 -127417930 + AluJb SINE Alu 9 311 -1 424 304 77 66 chr10 18171358 18171381 -127417907 + L1M4 LINE L1 3893 3914 -2232 3858 122 16 26 chr10 18171381 18171955 -127417333 + MER61E LTR ERV1 2 569 0 424 304 77 66 chr10 18171955 18172061 -127417227 + L1M4 LINE L1 3914 4017 -2129 1613 172 4 15 chr10 18172061 18172334 -127416954 + AluSx SINE Alu 36 305 -7 424 304 77 66 chr10 18172334 18172456 -127416832 + L1M4 LINE L1 4017 4136 -2010 1617 210 0 23 chr10 18172456 18172756 -127416532 + AluJb SINE Alu 1 293 -19 424 304 77 66 chr10 18172756 18172773 -127416515 + L1M4 LINE L1 4136 4151 -1995 2309 100 3 3 chr10 18172773 18173074 -127416214 + AluY SINE Alu 1 301 -10 424 304 77 66 chr10 18173074 18173155 -127416133 + L1M4 LINE L1 4151 4254 -1892 509 108 0 12 chr10 18173207 18173290 -127415998 + (ATAAG)n Simple_repeat Simple_repeat 1 82 0 499 356 40 67 chr10 18174846 18175327 -127413961 - ERVL LTR ERVL -1466 4188 3695 2218 112 3 0 chr10 18175327 18175622 -127413666 - AluSx SINE Alu -16 296 1 499 356 40 67 chr10 18175622 18176152 -127413136 - ERVL LTR ERVL -1959 3695 3117 3786 321 43 17 chr10 18176605 18177104 -127412184 - ERVL LTR ERVL -1905 3091 2607 2142 134 3 0 chr10 18177104 18177402 -127411886 + AluSx SINE Alu 1 299 -13 3786 321 43 17 chr10 18177402 18178467 -127410821 - ERVL LTR ERVL -2389 2607 1421 1164 284 53 39 chr10 18178542 18178621 -127410667 - LTR16B LTR ERVL 0 464 388 2200 120 63 20 chr10 18178621 18178970 -127410318 + THE1B LTR MaLR 1 364 0 1164 284 53 39 chr10 18178970 18179323 -127409965 - LTR16B LTR ERVL -76 388 26 1732 140 125 74 chr10 18179620 18180027 -127409261 + MSTA LTR MaLR 1 428 0 546 244 27 76 chr10 18180073 18180298 -127408990 + L2 LINE L2 3100 3313 0 473 275 81 6 chr10 18180390 18180550 -127408738 - MIR SINE MIR -80 182 11 285 143 157 14 chr10 18181476 18181546 -127407742 - MADE1 DNA Mariner 0 80 1 198 150 0 0 chr10 18181760 18181800 -127407488 + (GA)n Simple_repeat Simple_repeat 2 41 0 21 0 0 0 chr10 18182084 18182105 -127407183 + AT_rich Low_complexity Low_complexity 1 21 0 257 317 20 40 chr10 18182314 18182442 -127406846 + MIR SINE MIR 38 163 -63 2311 116 0 0 chr10 18182515 18182825 -127406463 + AluSx SINE Alu 2 311 -1 389 269 174 0 chr10 18182924 18183073 -127406215 - MER5A DNA MER1_type -1 188 14 2095 108 0 21 chr10 18183262 18183572 -127405716 + AluSx SINE Alu 1 304 0 1304 203 5 0 chr10 18183667 18183889 -127405399 + AluJo SINE Alu 1 223 -89 285 344 33 0 chr10 18183967 18184089 -127405199 + MIR SINE MIR 6 131 -131 485 200 105 0 chr10 18184225 18184330 -127404958 - FLAM_A SINE Alu -17 125 10 198 311 112 15 chr10 18184414 18184553 -127404735 + MIR SINE MIR 35 188 -58 1875 141 37 7 chr10 18184616 18184913 -127404375 - AluSq SINE Alu 0 313 8 1612 149 4 47 chr10 18185028 18185303 -127403985 - AluSx SINE Alu -49 263 1 246 339 51 0 chr10 18185693 18185811 -127403477 + MIR3 SINE MIR 40 163 -45 2487 153 10 0 chr10 18185857 18186255 -127403033 - MER57A LTR ERV1 -1 402 1 4283 102 29 2 chr10 18186280 18186896 -127402392 + LTR10E LTR ERV1 1 633 0 4855 81 17 4 chr10 18187369 18188384 -127400904 - MER11A LTR ERVK 0 1266 1 378 0 0 0 chr10 18188423 18188465 -127400823 + (T)n Simple_repeat Simple_repeat 1 42 0 685 152 0 0 chr10 18189309 18189408 -127399880 + AluSg/x SINE Alu 195 293 -16 1791 155 0 10 chr10 18190016 18190307 -127398981 + AluSx SINE Alu 1 288 -24 342 114 0 0 chr10 18190322 18190366 -127398922 + Alu SINE Alu 1 44 -258 1452 174 27 19 chr10 18190366 18190574 -127398714 - THE1-int LTR MaLR -592 988 776 1751 112 0 0 chr10 18190574 18190807 -127398481 - AluSc SINE Alu -48 261 29 1963 118 0 24 chr10 18190807 18191095 -127398193 + THE1-int LTR MaLR 708 988 -592 299 136 0 0 chr10 18191095 18191139 -127398149 - AluSc SINE Alu -259 44 1 1869 155 0 10 chr10 18191155 18191445 -127397843 - AluSx SINE Alu -25 287 1 1788 123 0 0 chr10 18193562 18193805 -127395483 + AluSx SINE Alu 43 285 -27 2178 126 0 7 chr10 18194408 18194717 -127394571 - AluSx SINE Alu -3 309 3 1825 162 3 30 chr10 18195075 18195378 -127393910 + AluJb SINE Alu 1 295 -17 541 172 98 8 chr10 18195380 18195502 -127393786 + FLAM_C SINE Alu 1 133 0 317 247 59 0 chr10 18195530 18195615 -127393673 - L2 LINE L2 -32 3281 3192 234 150 0 0 chr10 18195618 18195658 -127393630 + (TATATG)n Simple_repeat Simple_repeat 1 40 0 370 199 15 23 chr10 18195688 18195819 -127393469 + (TA)n Simple_repeat Simple_repeat 1 130 0 231 174 0 0 chr10 18195836 18195882 -127393406 - LTR66 LTR ERVL -171 439 394 * 261 109 0 0 chr10 18195844 18195890 -127393398 + LTR66 LTR ERVL 394 439 -171 2725 163 62 57 chr10 18196584 18197181 -127392107 - LTR18B LTR ERVL -14 600 1 261 0 0 0 chr10 18197549 18197578 -127391710 + (CA)n Simple_repeat Simple_repeat 1 29 0 245 95 0 24 chr10 18197838 18197880 -127391408 + (TTTC)n Simple_repeat Simple_repeat 4 44 0 608 159 29 0 chr10 18197911 18198049 -127391239 + CT-rich Low_complexity Low_complexity 2 143 0 1585 193 7 17 chr10 18198072 18198368 -127390920 - AluJo SINE Alu -19 293 1 840 256 18 27 chr10 18198572 18198795 -127390493 - MER58A DNA MER1_type 0 224 4 1780 174 166 38 chr10 18199858 18200305 -127388983 - MLT1D LTR MaLR 0 505 2 1116 254 55 23 chr10 18200919 18201409 -127387879 + LTR10B LTR ERV1 6 505 0 2162 132 0 3 chr10 18202388 18202691 -127386597 + AluSx SINE Alu 1 302 -10 2108 209 67 54 chr10 18202745 18203342 -127385946 - MER77 LTR ERV1 0 605 1 479 321 125 8 chr10 18203399 18203751 -127385537 + L1ME LINE L1 3071 3463 -2683 384 289 50 16 chr10 18203824 18203945 -127385343 - LTR16C LTR ERVL -366 125 1 462 266 124 74 chr10 18203956 18204170 -127385118 + L1ME LINE L1 5384 5586 -535 186 43 0 0 chr10 18204170 18204193 -127385095 + (TG)n Simple_repeat Simple_repeat 2 24 0 462 266 124 74 chr10 18204193 18204396 -127384892 + L1ME LINE L1 5586 5822 -299 761 191 8 0 chr10 18204402 18204533 -127384755 + FLAM_C SINE Alu 2 133 -10 33 0 0 0 chr10 18204535 18204568 -127384720 + AT_rich Low_complexity Low_complexity 1 33 0 1693 131 200 17 chr10 18204872 18205232 -127384056 - MSTA LTR MaLR -2 426 1 289 76 24 11 chr10 18205386 18205442 -127383846 - MLT2B1 LTR ERVL 0 520 482 404 209 23 0 chr10 18205480 18205652 -127383636 + (TAGA)n Simple_repeat Simple_repeat 4 179 0 1647 123 83 45 chr10 18205654 18205987 -127383301 + THE1C LTR MaLR 3 409 -19 10407 120 32 10 chr10 18205987 18207533 -127381755 + THE1C-int LTR MaLR 1 1580 0 1712 169 52 35 chr10 18207533 18207900 -127381388 + THE1C LTR MaLR 1 373 -2 2259 227 6 28 chr10 18207957 18207990 -127381298 - MLT2B2 LTR ERVL -20 467 435 814 68 20 27 chr10 18207990 18208136 -127381152 + (GAAA)n Simple_repeat Simple_repeat 4 148 0 2259 227 6 28 chr10 18208136 18208599 -127380689 - MLT2B2 LTR ERVL -52 435 1 347 325 26 7 chr10 18208732 18208886 -127380402 + MER103 DNA DNA 8 164 -2 2337 127 19 101 chr10 18209298 18209387 -127379901 - MSTA LTR MaLR 0 428 333 1951 121 0 44 chr10 18209387 18209685 -127379603 - AluSx SINE Alu -27 285 1 2337 127 19 101 chr10 18209685 18209861 -127379427 - MSTA LTR MaLR -95 333 215 2316 100 7 0 chr10 18209861 18210160 -127379128 - AluSp SINE Alu -12 301 1 2337 127 19 101 chr10 18210160 18210359 -127378929 - MSTA LTR MaLR -213 215 1 774 244 55 39 chr10 18210599 18210853 -127378435 - LTR16B LTR ERVL -1 463 206 3084 109 109 69 chr10 18211233 18211712 -127377576 + MER4A LTR ERV1 17 528 -136 2223 99 0 3 chr10 18211712 18212004 -127377284 + AluY SINE Alu 1 291 -20 3084 109 109 69 chr10 18212004 18212147 -127377141 + MER4A LTR ERV1 528 664 0 2512 73 0 0 chr10 18213627 18213930 -127375358 - AluY SINE Alu -8 303 1 1963 121 60 0 chr10 18214890 18215171 -127374117 + AluSx SINE Alu 1 298 -14 244 342 53 33 chr10 18215540 18215692 -127373596 + MIR SINE MIR 18 172 -90 2567 139 37 57 chr10 18215781 18215840 -127373448 - L1MA9 LINE L1 0 6312 6253 1784 155 3 30 chr10 18215840 18216137 -127373151 + AluJb SINE Alu 1 289 -23 2567 139 37 57 chr10 18216137 18216298 -127372990 - L1MA9 LINE L1 -59 6253 6090 180 111 0 0 chr10 18216298 18216325 -127372963 + (TG)n Simple_repeat Simple_repeat 2 28 0 2567 139 37 57 chr10 18216325 18216771 -127372517 - L1MA9 LINE L1 -222 6090 5714 1872 151 3 10 chr10 18217297 18217596 -127371692 - AluJo SINE Alu -15 297 1 198 150 33 17 chr10 18217830 18217890 -127371398 + (TG)n Simple_repeat Simple_repeat 2 62 0 2264 123 0 0 chr10 18218000 18218308 -127370980 - AluSx SINE Alu -4 308 1 2462 60 0 19 chr10 18218829 18219144 -127370144 - AluY SINE Alu -2 309 1 1973 137 32 0 chr10 18219449 18219733 -127369555 - AluSx SINE Alu -19 293 1 1790 175 21 0 chr10 18219736 18220027 -127369261 - AluJo SINE Alu -15 297 1 1818 166 0 44 chr10 18220511 18220831 -127368457 + AluJo SINE Alu 1 306 -6 1673 192 0 3 chr10 18220993 18221280 -127368008 - AluJo SINE Alu -26 286 1 2174 130 33 28 chr10 18221864 18222226 -127367062 - THE1B LTR MaLR 0 364 1 1914 159 6 13 chr10 18223030 18223462 -127365826 + AluJb SINE Alu 1 430 0 245 274 116 21 chr10 18223646 18223741 -127365547 + MIR SINE MIR 70 173 -89 1642 182 17 14 chr10 18224187 18224484 -127364804 + AluJo SINE Alu 1 298 -14 5889 71 5 0 chr10 18224647 18225450 -127363838 - L1PA7 LINE L1 0 6154 5348 253 211 19 0 chr10 18226112 18226164 -127363124 + MER94 DNA DNA 82 134 0 21 0 0 0 chr10 18226176 18226197 -127363091 + AT_rich Low_complexity Low_complexity 1 21 0 300 323 54 6 chr10 18226377 18226544 -127362744 - L1ME LINE L1 -451 5719 5545 1297 217 151 57 chr10 18227602 18229561 -127359727 + SATR1 Satellite Satellite 1 2144 -413 1944 116 0 11 chr10 18229563 18229840 -127359448 - AluSx SINE Alu -38 274 1 335 251 154 69 chr10 18230274 18230446 -127358842 + MLT1L LTR MaLR 11 167 -448 2173 114 3 0 chr10 18230446 18230743 -127358545 + AluSg SINE Alu 1 298 -12 504 0 0 0 chr10 18230744 18230800 -127358488 + (AATAG)n Simple_repeat Simple_repeat 1 56 0 335 251 154 69 chr10 18230800 18230872 -127358416 + MLT1L LTR MaLR 166 278 -337 246 254 34 0 chr10 18231225 18231284 -127358004 + MIR SINE MIR 188 248 -14 312 70 0 0 chr10 18231527 18231570 -127357718 + (CA)n Simple_repeat Simple_repeat 1 43 0 538 341 52 13 chr10 18231853 18232082 -127357206 + MIR SINE MIR 11 248 -14 339 130 0 0 chr10 18232089 18232143 -127357145 - AluSx SINE Alu -12 290 237 313 0 0 0 chr10 18232141 18232178 -127357110 - tRNA-Gly-GGA tRNA tRNA -38 37 1 * 1504 157 4 20 chr10 18232185 18232434 -127356854 - AluSx SINE Alu -67 245 1 1122 248 99 39 chr10 18232633 18233039 -127356249 + L1ME LINE L1 22 467 -5929 1951 146 31 34 chr10 18233039 18233395 -127355893 - THE1A LTR MaLR 0 355 1 1122 248 99 39 chr10 18233395 18233501 -127355787 + L1ME LINE L1 467 565 -5831 1526 196 8 43 chr10 18233505 18233857 -127355431 + MER6A DNA MER2_type 1 340 -265 2112 254 50 64 chr10 18233937 18234302 -127354986 + L1ME LINE L1 634 1003 -5393 1692 214 14 14 chr10 18234302 18234667 -127354621 + MLT1A1 LTR MaLR 1 365 0 2112 254 50 64 chr10 18234667 18235516 -127353772 + L1ME LINE L1 1003 1831 -4565 6302 90 5 1 chr10 18235516 18236714 -127352574 + L1PA8A LINE L1 4925 6126 -5 1588 149 6 98 chr10 18236784 18237100 -127352188 - AluJo SINE Alu -25 287 1 305 196 39 20 chr10 18237107 18237209 -127352079 + L1ME LINE L1 1841 1944 -4452 3076 258 94 4 chr10 18237211 18238525 -127350763 + L1ME LINE L1 2239 3671 -2544 1779 223 85 25 chr10 18238555 18239430 -127349858 + L1ME LINE L1 4746 5672 -563 207 0 0 0 chr10 18239548 18239571 -127349717 + (TTA)n Simple_repeat Simple_repeat 3 25 0 379 329 137 35 chr10 18239791 18240214 -127349074 - L3b LINE CR1 -10 1573 1108 1989 145 0 3 chr10 18240962 18241258 -127348030 - AluSx SINE Alu -17 295 1 22 0 0 0 chr10 18241264 18241286 -127348002 + AT_rich Low_complexity Low_complexity 1 22 0 642 197 40 88 chr10 18241480 18241596 -127347692 - L1ME2 LINE L1 -173 5991 5871 2147 120 0 3 chr10 18241596 18241896 -127347392 - AluSx SINE Alu -13 299 1 642 197 40 88 chr10 18241896 18241969 -127347319 - L1ME2 LINE L1 -293 5871 5843 2109 120 147 5 chr10 18241969 18242344 -127346944 + MSTA LTR MaLR 1 428 0 642 197 40 88 chr10 18242344 18242428 -127346860 - L1ME2 LINE L1 -321 5843 5757 365 261 18 18 chr10 18242997 18243031 -127346257 - MIR SINE MIR -78 184 151 2402 82 7 0 chr10 18243031 18243335 -127345953 - AluSp SINE Alu -7 306 1 365 261 18 18 chr10 18243335 18243411 -127345877 - MIR SINE MIR -110 152 74 497 258 145 6 chr10 18244679 18244838 -127344450 - MIR SINE MIR 0 262 82 378 358 37 0 chr10 18244848 18244982 -127344306 - L2 LINE L2 0 3313 3175 2363 128 22 112 chr10 18245091 18245647 -127343641 + LTR10A LTR ERV1 1 506 -103 615 357 105 5 chr10 18246066 18246475 -127342813 + L3 LINE CR1 877 1326 -251 1189 178 92 43 chr10 18246476 18246627 -127342661 + MLT1A1 LTR MaLR 1 143 -222 2145 115 0 10 chr10 18246627 18246931 -127342357 + AluSg SINE Alu 1 301 -9 1189 178 92 43 chr10 18246931 18247127 -127342161 + MLT1A1 LTR MaLR 143 365 0 298 314 32 70 chr10 18247225 18247410 -127341878 - L2 LINE L2 -67 3205 3028 218 273 0 61 chr10 18247405 18247471 -127341817 + L2 LINE L2 3251 3312 -1 * 2033 130 14 0 chr10 18247681 18247973 -127341315 + AluSg SINE Alu 3 298 -12 291 282 19 19 chr10 18248061 18248164 -127341124 - L2 LINE L2 -2 3311 3209 845 246 46 54 chr10 18248883 18249143 -127340145 - MIR SINE MIR 0 262 5 2135 140 5 42 chr10 18249260 18249638 -127339650 - THE1B LTR MaLR 0 364 1 217 250 60 60 chr10 18249972 18250072 -127339216 - L2 LINE L2 -46 3267 3168 249 333 63 55 chr10 18250418 18250824 -127338464 - L2 LINE L2 -192 3080 2659 600 251 70 104 chr10 18250920 18251335 -127337953 + MLT1H1 LTR MaLR 68 443 -112 1754 161 44 3 chr10 18251335 18251633 -127337655 + AluJo SINE Alu 1 310 -2 600 251 70 104 chr10 18251633 18251737 -127337551 + MLT1H1 LTR MaLR 443 549 -6 387 129 20 10 chr10 18251804 18251905 -127337383 + (TCTA)n Simple_repeat Simple_repeat 3 104 0 1900 163 3 3 chr10 18251912 18252243 -127337045 - MLT2C1 LTR ERVL -66 331 1 1844 79 7 76 chr10 18252710 18252987 -127336301 + AluY SINE Alu 46 303 -8 271 309 138 8 chr10 18254447 18254570 -127334718 - MIR SINE MIR -3 259 121 240 35 0 0 chr10 18254947 18254976 -127334312 + (CA)n Simple_repeat Simple_repeat 2 30 0 695 99 0 0 chr10 18255443 18255556 -127333732 + FLAM_A SINE Alu 25 137 0 325 331 47 24 chr10 18256258 18256385 -127332903 + MIR SINE MIR 17 146 -62 3699 138 28 6 chr10 18256556 18257194 -127332094 + L1MA7 LINE L1 5639 6290 -1 24 0 0 0 chr10 18257969 18257993 -127331295 + AT_rich Low_complexity Low_complexity 1 24 0 244 269 65 32 chr10 18258101 18258194 -127331094 + L2 LINE L2 3172 3267 -5 217 226 19 19 chr10 18259741 18259794 -127329494 - L3 LINE CR1 -1 1576 1524 257 284 196 0 chr10 18260425 18260527 -127328761 - L2 LINE L2 -1 3271 3150 1823 171 10 13 chr10 18261402 18261700 -127327588 - AluSx SINE Alu -15 297 1 1957 108 33 49 chr10 18262142 18262447 -127326841 - AluSg SINE Alu -10 300 1 309 262 0 0 chr10 18263585 18263646 -127325642 + polypurine Low_complexity Low_complexity 1 61 0 601 201 17 11 chr10 18263646 18263825 -127325463 + GA-rich Low_complexity Low_complexity 1 180 0 670 276 155 6 chr10 18265391 18265906 -127323382 + L1MEc LINE L1 1731 2322 -4074 617 119 10 0 chr10 18265910 18266011 -127323277 + (GAA)n Simple_repeat Simple_repeat 1 102 0 2797 235 62 23 chr10 18266214 18266530 -127322758 + L1MEc LINE L1 3250 3552 -2663 306 0 0 0 chr10 18266530 18266564 -127322724 + (CA)n Simple_repeat Simple_repeat 2 35 0 2797 235 62 23 chr10 18266564 18267251 -127322037 + L1MEc LINE L1 3552 4292 -1923 2322 94 0 0 chr10 18267725 18268022 -127321266 - AluSg SINE Alu -13 297 1 474 291 24 18 chr10 18268627 18268792 -127320496 - MER63A DNA MER1_type -6 204 39 311 343 48 14 chr10 18269905 18270051 -127319237 - MIR SINE MIR -111 151 1 1229 236 4 19 chr10 18270386 18270657 -127318631 + Tigger7 DNA MER2_type 1 267 -2220 521 184 10 0 chr10 18270655 18270753 -127318535 + Tigger7 DNA MER2_type 2489 2587 0 * 952 239 124 43 chr10 18271639 18271986 -127317302 - LTR33 LTR ERVL -120 401 27 2482 119 8 3 chr10 18272157 18272519 -127316769 - THE1B LTR MaLR 0 364 1 604 260 28 163 chr10 18273031 18273127 -127316161 - L2 LINE L2 -4 3309 3202 2069 98 28 63 chr10 18273127 18273445 -127315843 + AluSp SINE Alu 2 308 -5 604 260 28 163 chr10 18273445 18273925 -127315363 - L2 LINE L2 -111 3202 2811 416 272 0 29 chr10 18273942 18274045 -127315243 + MER5A DNA MER1_type 10 109 -80 640 223 40 17 chr10 18274085 18274260 -127315028 - L1MB8 LINE L1 -1 6177 5999 * 2829 223 65 34 chr10 18274251 18275006 -127314282 - L1MEc LINE L1 -3166 3049 2271 2241 66 38 10 chr10 18275006 18275295 -127313993 - AluY SINE Alu -14 297 1 2829 223 65 34 chr10 18275295 18275712 -127313576 - L1MEc LINE L1 -3944 2271 1868 2057 288 64 9 chr10 18275815 18276514 -127312774 - L2 LINE L2 -508 2806 2069 2023 139 7 7 chr10 18276514 18276824 -127312464 + AluSx SINE Alu 1 310 -2 188 299 15 15 chr10 18276965 18277032 -127312256 + MER5A DNA MER1_type 122 188 -1 276 349 108 0 chr10 18277457 18277623 -127311665 + MIR SINE MIR 53 236 -26 453 139 0 38 chr10 18277723 18277802 -127311486 - MLT1F LTR MaLR -4 538 463 * 594 259 35 0 chr10 18277799 18277942 -127311346 - MLT1F LTR MaLR -369 173 26 3852 143 52 19 chr10 18277943 18278591 -127310697 + LTR51 LTR ERV1 1 670 -1 387 0 0 0 chr10 18279084 18279127 -127310161 + (CA)n Simple_repeat Simple_repeat 1 43 0 222 345 149 0 chr10 18279138 18279225 -127310063 + MIR3 SINE MIR 55 154 -54 1872 117 32 32 chr10 18279445 18279780 -127309508 + AluSx SINE Alu 2 336 0 960 133 13 13 chr10 18279963 18280114 -127309174 - FRAM SINE Alu -26 150 1 263 286 0 14 chr10 18281246 18281316 -127307972 + MLT1J2 LTR MaLR 263 331 -119 2340 159 45 23 chr10 18281974 18282414 -127306874 + LTR7 LTR ERV1 1 450 0 376 229 59 42 chr10 18282464 18282582 -127306706 - L2 LINE L2 0 3272 3153 2382 88 0 3 chr10 18283857 18284164 -127305124 + AluY SINE Alu 1 306 -5 207 244 0 0 chr10 18284279 18284357 -127304931 + GA-rich Low_complexity Low_complexity 1 78 0 593 89 89 0 chr10 18284439 18284529 -127304759 + MER4A LTR ERV1 1 98 -566 1739 128 174 76 chr10 18284529 18284897 -127304391 + MER4A LTR ERV1 261 664 0 2999 97 145 36 chr10 18284900 18285457 -127303831 + MER4A-int LTR ERV1 1 618 -5980 344 177 0 38 chr10 18285462 18285541 -127303747 + MER4A-int LTR ERV1 751 826 -5772 252 156 0 44 chr10 18285564 18285609 -127303679 + LTR49 LTR ERV1 271 313 -282 995 142 32 16 chr10 18285629 18285819 -127303469 + MER4A-int LTR ERV1 993 1185 -5413 294 239 0 0 chr10 18285822 18285914 -127303374 + (TG)n Simple_repeat Simple_repeat 1 92 0 680 88 42 162 chr10 18285914 18286159 -127303129 + MER4A-int LTR ERV1 566 749 -4266 4293 85 72 8 chr10 18286185 18286835 -127302453 + MER4A-int LTR ERV1 1804 2495 -4103 1401 163 75 0 chr10 18286835 18287074 -127302214 - LTR8 LTR ERV1 -434 257 1 1188 57 6 6 chr10 18287074 18287251 -127302037 + MER4A-int LTR ERV1 2737 2913 -3685 15662 101 66 17 chr10 18287270 18287306 -127301982 + MER4A-int LTR ERV1 3964 3997 -2601 1967 132 0 0 chr10 18287306 18287578 -127301710 - AluSq SINE Alu -41 272 1 15662 101 66 17 chr10 18287578 18290014 -127299274 + MER4A-int LTR ERV1 3997 6563 -35 215 31 31 0 chr10 18290014 18290046 -127299242 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 15662 101 66 17 chr10 18290046 18290079 -127299209 + MER4A-int LTR ERV1 6563 6593 -5 537 88 99 11 chr10 18290090 18290181 -127299107 + MER4A LTR ERV1 1 99 -565 596 139 10 137 chr10 18290181 18290391 -127298897 + MER4A LTR ERV1 262 504 -160 1763 128 87 17 chr10 18290391 18290767 -127298521 - LTR7 LTR ERV1 0 450 1 1153 137 6 0 chr10 18290767 18290930 -127298358 + MER4B LTR ERV1 445 608 -2 1541 167 8 0 chr10 18290933 18291185 -127298103 + AluJo SINE Alu 21 274 -38 285 29 0 0 chr10 18291188 18291222 -127298066 + (CA)n Simple_repeat Simple_repeat 1 34 0 1854 81 12 142 chr10 18291222 18291566 -127297722 + AluSg SINE Alu 1 299 -11 1990 165 59 34 chr10 18291619 18292007 -127297281 - MER48 LTR ERV1 0 398 1 2044 96 3 51 chr10 18292266 18292579 -127296709 - AluSp SINE Alu -15 298 1 351 217 76 11 chr10 18292812 18292904 -127296384 - MLT1I LTR MaLR -7 402 305 529 115 0 0 chr10 18292961 18293039 -127296249 + MLT2B1 LTR ERVL 5 82 -438 3451 135 41 87 chr10 18293646 18294370 -127294918 + LTR8 LTR ERV1 1 691 0 1008 166 6 0 chr10 18294848 18295005 -127294283 - FRAM SINE Alu -25 151 1 1625 157 32 11 chr10 18295014 18295295 -127293993 - AluJo SINE Alu -25 287 1 2333 91 3 0 chr10 18295874 18296170 -127293118 - AluSp SINE Alu -16 297 1 2284 64 7 7 chr10 18296257 18296574 -127292714 - AluY SINE Alu 0 311 1 405 304 32 45 chr10 18296753 18296973 -127292315 + MIR SINE MIR 32 248 -14 362 332 109 34 chr10 18297043 18297392 -127291896 - L2 LINE L2 -1 3312 2938 872 186 6 0 chr10 18297393 18297549 -127291739 + FRAM SINE Alu 1 157 -19 237 260 55 0 chr10 18297655 18297728 -127291560 - L2 LINE L2 -650 2664 2588 366 225 47 87 chr10 18297738 18297883 -127291405 - MLT1I LTR MaLR -7 416 303 3136 136 37 29 chr10 18297883 18298399 -127290889 + MLT2B1 LTR ERVL 1 520 0 366 225 47 87 chr10 18298399 18298435 -127290853 - MLT1I LTR MaLR -120 303 267 235 264 11 46 chr10 18298530 18298617 -127290671 - MLT1I LTR MaLR -284 125 42 310 320 0 0 chr10 18298670 18298767 -127290521 - L2 LINE L2 -756 2558 2462 1838 143 122 36 chr10 18299984 18300319 -127288969 + THE1B LTR MaLR 1 364 0 27 29 0 0 chr10 18300555 18300589 -127288699 + AT_rich Low_complexity Low_complexity 1 34 0 2163 105 28 0 chr10 18300615 18300900 -127288388 + AluSp SINE Alu 2 294 -19 217 332 109 43 chr10 18301208 18301419 -127287869 + L2 LINE L2 1063 1287 -2027 2423 84 0 3 chr10 18302239 18302548 -127286740 - AluSq SINE Alu -5 308 1 2370 100 0 0 chr10 18303058 18303358 -127285930 + AluSx SINE Alu 1 300 -12 305 309 67 47 chr10 18304191 18304340 -127284948 - L2 LINE L2 -29 3243 3092 1296 167 149 32 chr10 18304617 18304648 -127284640 - LTR37A LTR ERV1 -1 425 399 1893 160 7 10 chr10 18304648 18304954 -127284334 + AluJb SINE Alu 1 305 -7 1296 167 149 32 chr10 18304954 18305264 -127284024 - LTR37A LTR ERV1 -27 399 44 2066 125 10 0 chr10 18305264 18305553 -127283735 + AluSx SINE Alu 1 292 -20 14100 41 10 2 chr10 18305555 18307948 -127281340 + L1PA5 LINE L1 3748 6150 -4 848 100 0 0 chr10 18308521 18308631 -127280657 + HY1 scRNA scRNA 1 110 -2 2207 113 3 10 chr10 18308794 18309103 -127280185 + AluSx SINE Alu 1 307 -5 480 307 29 49 chr10 18309125 18309330 -127279958 - MIR SINE MIR -16 246 46 1334 221 28 36 chr10 18309356 18309445 -127279843 + LTR37A LTR ERV1 5 93 -333 1853 205 94 13 chr10 18309445 18309893 -127279395 + MER31A LTR ERV1 1 484 -1 1334 221 28 36 chr10 18309893 18310161 -127279127 + LTR37A LTR ERV1 93 359 -67 1197 189 25 8 chr10 18310161 18310399 -127278889 + AluJo SINE Alu 62 303 -9 317 153 0 14 chr10 18310401 18310473 -127278815 + LTR37A LTR ERV1 356 426 0 467 305 52 66 chr10 18310520 18310615 -127278673 + MIR SINE MIR 11 106 -156 2273 107 0 10 chr10 18310615 18310924 -127278364 + AluY SINE Alu 1 306 -5 467 305 52 66 chr10 18310924 18311041 -127278247 + MIR SINE MIR 106 220 -42 1627 235 80 45 chr10 18311094 18311631 -127277657 + MER34B LTR ERV1 6 561 -4 302 287 222 9 chr10 18311683 18311791 -127277497 - MER5A DNA MER1_type 0 189 59 2113 127 10 0 chr10 18311806 18312106 -127277182 - AluSp SINE Alu -10 303 1 2705 203 17 11 chr10 18312172 18312705 -127276583 + LTR31 LTR ERV1 69 604 -15 197 328 17 0 chr10 18312713 18312771 -127276517 - MER5A DNA MER1_type -122 67 9 2046 105 25 0 chr10 18313397 18313682 -127275606 + AluSx SINE Alu 1 292 -20 204 40 0 0 chr10 18313686 18313711 -127275577 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 36 0 0 0 chr10 18313751 18313787 -127275501 + AT_rich Low_complexity Low_complexity 1 36 0 2334 108 0 0 chr10 18314725 18315022 -127274266 - AluSx SINE Alu -15 297 1 244 338 14 0 chr10 18315199 18315273 -127274015 + Tigger8 DNA MER2_type 573 647 -19 722 113 0 182 chr10 18315362 18315521 -127273767 + AluJo SINE Alu 2 131 -171 242 256 0 64 chr10 18315522 18315567 -127273721 + AluJo SINE Alu 201 241 -61 1992 107 7 0 chr10 18315567 18315839 -127273449 + AluSp SINE Alu 34 307 -6 242 256 0 64 chr10 18315839 18315871 -127273417 + AluJo SINE Alu 241 273 -29 273 29 0 0 chr10 18317112 18317146 -127272142 + (TG)n Simple_repeat Simple_repeat 1 34 0 2138 84 15 0 chr10 18317149 18317422 -127271866 - AluSq SINE Alu -36 277 1 938 243 24 0 chr10 18318669 18318924 -127270364 + L1MA4 LINE L1 6039 6299 -1 220 276 0 0 chr10 18319186 18319244 -127270044 + T-rich Low_complexity Low_complexity 1 58 0 181 288 62 0 chr10 18319781 18319861 -127269427 - MIR SINE MIR -53 209 125 1087 324 112 18 chr10 18319878 18320434 -127268854 + L2 LINE L2 873 1480 -1834 1457 216 70 35 chr10 18320434 18320805 -127268483 - MLT1B LTR MaLR 0 390 7 211 320 181 26 chr10 18320811 18321120 -127268168 + L2 LINE L2 1476 1832 -1482 230 191 146 91 chr10 18321153 18321263 -127268025 + MER39 LTR ERV1 4 119 -588 * 789 222 128 49 chr10 18321246 18321676 -127267612 + LTR48B LTR ERV1 148 782 -5 194 217 22 0 chr10 18321682 18321728 -127267560 + L2 LINE L2 1881 1927 -1387 2497 82 0 0 chr10 18321742 18322046 -127267242 - AluSg SINE Alu -6 304 1 792 283 41 8 chr10 18322701 18322945 -127266343 + MER34 LTR ERV1 34 285 -257 317 177 16 0 chr10 18323003 18323065 -127266223 + LTR52-int LTR ERVL 693 755 -4588 2072 130 0 16 chr10 18323289 18323597 -127265691 - AluSx SINE Alu -8 304 2 402 78 0 0 chr10 18323598 18323649 -127265639 - L1M4 LINE L1 -577 5607 5557 285 241 28 74 chr10 18323794 18323902 -127265386 + LTR52-int LTR ERVL 503 605 -2951 2437 87 3 0 chr10 18324225 18324523 -127264765 - AluSx SINE Alu -13 299 1 1870 147 0 51 chr10 18324526 18324840 -127264448 - AluJo SINE Alu -12 300 3 2719 78 3 0 chr10 18325083 18325431 -127263857 - L1PA13 LINE L1 -26 6137 5789 2400 70 10 0 chr10 18325445 18325743 -127263545 - AluSp SINE Alu -12 301 1 2299 109 7 0 chr10 18326229 18326532 -127262756 + AluSx SINE Alu 1 305 -7 241 239 0 0 chr10 18327511 18327557 -127261731 + MIR SINE MIR 107 152 -110 279 258 161 0 chr10 18327728 18327852 -127261436 - MIR SINE MIR -32 230 87 1815 156 7 14 chr10 18327939 18328228 -127261060 - AluJb SINE Alu -25 287 1 212 314 20 0 chr10 18328242 18328293 -127260995 - L3b LINE CR1 -17 1566 1515 1889 126 0 0 chr10 18328330 18328592 -127260696 - AluSx SINE Alu -18 294 33 193 243 100 43 chr10 18328758 18328828 -127260460 + L2 LINE L2 3194 3267 -5 1451 225 38 67 chr10 18329834 18330289 -127258999 - L1MC5 LINE L1 -51 7910 7474 2423 69 0 3 chr10 18330289 18330593 -127258695 - AluY SINE Alu -8 303 1 1451 225 38 67 chr10 18330593 18330720 -127258568 - L1MC5 LINE L1 -487 7474 7345 26 30 0 0 chr10 18330745 18330778 -127258510 + AT_rich Low_complexity Low_complexity 1 33 0 1448 218 62 107 chr10 18330826 18331534 -127257754 - L1MC5 LINE L1 -632 7329 6658 2146 129 0 3 chr10 18331534 18331836 -127257452 - AluSx SINE Alu -11 301 1 1448 218 62 107 chr10 18331836 18331927 -127257361 - L1MC5 LINE L1 -1303 6658 6564 895 136 0 0 chr10 18332062 18332180 -127257108 + FLAM_C SINE Alu 1 118 -15 554 282 69 69 chr10 18332552 18332710 -127256578 - HAL1b LINE L1 -683 665 508 2267 97 3 3 chr10 18332710 18333021 -127256267 - AluSq SINE Alu -2 311 1 554 282 69 69 chr10 18333021 18333312 -127255976 - HAL1b LINE L1 -839 509 216 882 145 0 0 chr10 18333449 18333580 -127255708 - FLAM_C SINE Alu -12 131 1 204 342 13 7 chr10 18333590 18333739 -127255549 + T-rich Low_complexity Low_complexity 4 153 0 1598 188 0 34 chr10 18333789 18334087 -127255201 - AluJo SINE Alu -4 308 21 789 189 0 54 chr10 18335475 18335623 -127253665 - FLAM_C SINE Alu -2 141 2 459 265 86 86 chr10 18336188 18336501 -127252787 + HAL1 LINE L1 1322 1634 -873 426 311 72 17 chr10 18336540 18336720 -127252568 - MLT1J LTR MaLR -108 403 214 677 256 0 12 chr10 18336848 18337008 -127252280 - MLT1J LTR MaLR -325 186 29 640 289 155 34 chr10 18337058 18337968 -127251320 + L1ME3A LINE L1 4074 5093 -1053 234 0 0 0 chr10 18338162 18338188 -127251100 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 392 331 104 21 chr10 18338211 18338703 -127250585 + L1ME3A LINE L1 5347 5882 -288 2102 105 0 68 chr10 18338768 18339091 -127250197 + AluSx SINE Alu 1 301 -11 1946 178 65 11 chr10 18340520 18340875 -127248413 - THE1C LTR MaLR -1 374 1 276 284 194 26 chr10 18340946 18341101 -127248187 - MIR SINE MIR -1 261 81 1271 210 63 71 chr10 18341174 18341622 -127247666 - MER66A LTR ERV1 0 478 97 1876 147 31 10 chr10 18341626 18341919 -127247369 - AluJo SINE Alu 0 312 14 834 185 0 0 chr10 18342865 18342995 -127246293 - FLAM_C SINE Alu -3 130 1 533 140 43 0 chr10 18343234 18343327 -127245961 - LTR49 LTR ERV1 -5 590 494 23 0 0 0 chr10 18343332 18343355 -127245933 + AT_rich Low_complexity Low_complexity 1 23 0 1794 68 5 0 chr10 18343493 18343712 -127245576 - AluY SINE Alu -91 220 1 2978 123 43 54 chr10 18343739 18343987 -127245301 - MER39B LTR ERV1 -122 531 282 2158 138 39 30 chr10 18343987 18344348 -127244940 - THE1B LTR MaLR 0 364 1 2978 123 43 54 chr10 18344348 18344393 -127244895 - MER39B LTR ERV1 -371 282 238 1402 201 60 7 chr10 18344393 18344677 -127244611 - AluJo SINE Alu -13 299 1 2978 123 43 54 chr10 18344677 18344919 -127244369 - MER39B LTR ERV1 -415 238 1 344 267 30 10 chr10 18345009 18345110 -127244178 - L2 LINE L2 0 3313 3211 207 256 0 33 chr10 18345164 18345254 -127244034 + A-rich Low_complexity Low_complexity 4 90 0 235 229 92 76 chr10 18345987 18346118 -127243170 + MIR3 SINE MIR 24 156 -52 2363 79 26 0 chr10 18346896 18347199 -127242089 + AluY SINE Alu 1 311 0 28 0 0 0 chr10 18347220 18347248 -127242040 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr10 18347839 18347867 -127241421 + AT_rich Low_complexity Low_complexity 1 28 0 2006 117 0 17 chr10 18347961 18348251 -127241037 - AluSx SINE Alu -9 303 19 287 202 138 32 chr10 18348544 18348665 -127240623 - MIR3 SINE MIR -62 146 15 337 246 24 157 chr10 18349279 18349527 -127239761 - L2 LINE L2 -219 3053 2839 409 276 25 111 chr10 18349835 18350169 -127239119 - L2 LINE L2 -604 2710 2408 3628 119 33 4 chr10 18350169 18350680 -127238608 - MER1A DNA MER1_type -1 526 1 409 276 25 111 chr10 18350680 18350707 -127238581 - L2 LINE L2 -906 2408 2380 364 309 101 14 chr10 18350710 18350849 -127238439 - MIR SINE MIR -91 171 21 663 301 101 39 chr10 18351228 18351613 -127237675 - L2 LINE L2 0 3313 2905 835 176 8 0 chr10 18352348 18352479 -127236809 - FLAM_A SINE Alu -1 132 1 226 284 53 0 chr10 18352529 18352624 -127236664 - L1M4 LINE L1 -2243 3903 3804 2272 93 3 0 chr10 18352712 18353003 -127236285 + AluSg SINE Alu 1 292 -18 2110 128 0 7 chr10 18353030 18353326 -127235962 + AluSx SINE Alu 1 294 -18 1568 169 19 51 chr10 18354427 18354741 -127234547 - AluJo SINE Alu -4 308 5 1724 166 0 34 chr10 18355078 18355394 -127233894 - AluJo SINE Alu 0 306 1 2850 16 0 0 chr10 18355531 18355841 -127233447 + AluYa5 SINE Alu 1 310 -1 186 200 13 27 chr10 18356151 18356226 -127233062 + (TA)n Simple_repeat Simple_repeat 1 74 0 287 144 61 15 chr10 18356333 18356465 -127232823 + (TA)n Simple_repeat Simple_repeat 1 138 0 487 126 52 29 chr10 18356507 18356681 -127232607 + (TA)n Simple_repeat Simple_repeat 1 178 0 180 109 43 22 chr10 18356725 18356771 -127232517 + (TA)n Simple_repeat Simple_repeat 1 47 0 248 188 0 47 chr10 18358437 18358501 -127230787 - L1MC5 LINE L1 -45 7916 7856 1369 217 11 49 chr10 18358697 18359065 -127230223 - MLT1A1 LTR MaLR -11 354 1 530 274 138 19 chr10 18359066 18359399 -127229889 - MER57A LTR ERV1 0 403 9 719 239 27 63 chr10 18359409 18359631 -127229657 - MER58A DNA MER1_type -9 215 2 360 249 150 98 chr10 18359959 18360227 -127229061 - L1M2 LINE L1 -5766 1083 830 207 114 0 0 chr10 18360227 18360262 -127229026 + (CGG)n Simple_repeat Simple_repeat 2 36 0 360 249 150 98 chr10 18360262 18360375 -127228913 - L1M2 LINE L1 -6019 830 677 198 0 0 0 chr10 18360375 18360397 -127228891 + (CTG)n Simple_repeat Simple_repeat 3 24 0 360 249 150 98 chr10 18360397 18360420 -127228868 - L1M2 LINE L1 -6172 677 657 37 0 0 0 chr10 18360449 18360486 -127228802 + GC_rich Low_complexity Low_complexity 1 37 0 2260 116 0 0 chr10 18361162 18361456 -127227832 + AluSq SINE Alu 1 294 -19 22 0 0 0 chr10 18361510 18361532 -127227756 + AT_rich Low_complexity Low_complexity 1 22 0 1570 260 86 19 chr10 18361538 18361799 -127227489 + L1ME3A LINE L1 5590 5832 -338 315 0 0 0 chr10 18361799 18361834 -127227454 + (CA)n Simple_repeat Simple_repeat 2 36 0 1570 260 86 19 chr10 18361834 18362107 -127227181 + L1ME3A LINE L1 5832 6160 -10 370 285 69 15 chr10 18362408 18362538 -127226750 + MIR SINE MIR 52 188 -74 596 244 30 111 chr10 18362889 18362959 -127226329 - MIR SINE MIR -6 256 182 2554 117 41 34 chr10 18362959 18363395 -127225893 - L1PB4 LINE L1 -7 6149 5711 596 244 30 111 chr10 18363395 18363595 -127225693 - MIR SINE MIR -80 182 8 255 31 0 0 chr10 18363621 18363653 -127225635 + (TG)n Simple_repeat Simple_repeat 2 33 0 1899 163 0 3 chr10 18363795 18364096 -127225192 + AluSx SINE Alu 1 300 -12 405 295 73 70 chr10 18365236 18365592 -127223696 - L1M4 LINE L1 -2985 3161 2805 1869 117 10 33 chr10 18365619 18365953 -127223335 + AluY SINE Alu 1 311 0 1788 144 54 4 chr10 18366438 18366715 -127222573 + AluSx SINE Alu 1 291 -21 26 30 0 0 chr10 18366715 18366748 -127222540 + AT_rich Low_complexity Low_complexity 1 33 0 3713 74 18 10 chr10 18367022 18367537 -127221751 - L1PA11 LINE L1 -348 5826 5308 1912 125 38 3 chr10 18367538 18367825 -127221463 - AluSx SINE Alu -15 297 1 184 395 53 0 chr10 18367844 18367958 -127221330 - L2 LINE L2 -508 2806 2687 247 238 16 0 chr10 18368204 18368267 -127221021 + (TA)n Simple_repeat Simple_repeat 1 64 0 2202 98 40 0 chr10 18368398 18368694 -127220594 + AluSg SINE Alu 1 308 -2 224 323 68 62 chr10 18369316 18369771 -127219517 - L2 LINE L2 -823 2491 2034 206 259 52 0 chr10 18372087 18372145 -127217143 + L2 LINE L2 3148 3208 -64 2270 102 0 0 chr10 18372929 18373224 -127216064 + AluSg SINE Alu 1 295 -15 1820 208 35 37 chr10 18373409 18373487 -127215801 + L1M4 LINE L1 4885 4962 -1216 1846 116 25 7 chr10 18373487 18373791 -127215497 + AluSx SINE Alu 1 309 0 1820 208 35 37 chr10 18373791 18374303 -127214985 + L1M4 LINE L1 4962 5469 -709 823 453 36 22 chr10 18374590 18374868 -127214420 + AluSx SINE Alu 1 282 -30 6790 40 2 0 chr10 18374880 18375676 -127213612 - L1PA3 LINE L1 -2 6153 5356 * 8116 31 0 4 chr10 18375663 18376642 -127212646 + L1PA3 LINE L1 4386 5360 -786 249 342 101 9 chr10 18376700 18376928 -127212360 + L2 LINE L2 2399 2647 -667 944 190 13 0 chr10 18376969 18377127 -127212161 - AluJb SINE Alu -26 286 127 1755 103 0 9 chr10 18377152 18377384 -127211904 + AluSg/x SINE Alu 68 297 -15 470 313 27 14 chr10 18377433 18377580 -127211708 + L2 LINE L2 3116 3264 -8 292 217 0 43 chr10 18377657 18377726 -127211562 + MER96B DNA MER1_type? 32 97 -320 617 122 0 0 chr10 18377729 18377819 -127211469 + MLT2B1 LTR ERVL 5 94 -426 701 150 18 9 chr10 18377826 18377939 -127211349 - AluJb SINE Alu -25 287 174 1748 185 76 47 chr10 18377952 18378358 -127210930 + MLT2B1 LTR ERVL 100 517 -3 277 154 0 0 chr10 18378358 18378406 -127210882 - MER96B DNA MER1_type? -101 316 269 941 148 6 60 chr10 18378406 18378588 -127210700 + AluJo SINE Alu 122 293 -19 923 133 4 124 chr10 18378595 18378760 -127210528 - MER96B DNA MER1_type? -164 253 123 1917 156 0 3 chr10 18378760 18379048 -127210240 + AluJb SINE Alu 1 287 -25 923 133 4 124 chr10 18379048 18379116 -127210172 - MER96B DNA MER1_type? -294 123 48 710 243 75 45 chr10 18379152 18379341 -127209947 + MER34B LTR ERV1 270 471 -94 1868 157 10 0 chr10 18379341 18379640 -127209648 - AluSg SINE Alu -8 302 1 710 243 75 45 chr10 18379640 18379718 -127209570 + MER34B LTR ERV1 471 545 -20 447 293 52 65 chr10 18380029 18380173 -127209115 - MIR SINE MIR -13 249 108 862 144 0 182 chr10 18380173 18380409 -127208879 + 7SK RNA RNA 1 193 0 447 293 52 65 chr10 18380409 18380493 -127208795 - MIR SINE MIR -154 108 24 187 170 19 19 chr10 18380535 18380588 -127208700 + CT-rich Low_complexity Low_complexity 3 55 0 474 196 149 0 chr10 18380601 18380708 -127208580 - L2 LINE L2 -1 3312 3190 1026 219 28 36 chr10 18380711 18380962 -127208326 + LTR8 LTR ERV1 1 249 -442 1047 244 23 99 chr10 18381183 18381658 -127207630 + L1ME2 LINE L1 5649 6087 -77 386 235 200 0 chr10 18381577 18381692 -127207596 + L1MA10 LINE L1 6169 6306 -28 * 214 278 68 98 chr10 18381729 18381934 -127207354 + MIR SINE MIR 6 204 -58 346 305 81 38 chr10 18382285 18383040 -127206248 - L1M4 LINE L1 -501 5683 4860 2027 150 0 0 chr10 18384018 18384318 -127204970 - AluJb SINE Alu -12 300 1 298 212 76 0 chr10 18385611 18385677 -127203611 + Tigger7 DNA MER2_type 2417 2487 0 260 222 19 0 chr10 18387538 18387592 -127201696 + L1ME3A LINE L1 6095 6149 -21 1642 159 18 25 chr10 18387621 18387897 -127201391 + AluJo SINE Alu 1 274 -38 674 146 28 28 chr10 18387900 18388078 -127201210 + GA-rich Low_complexity Low_complexity 1 178 0 201 138 0 0 chr10 18388078 18388107 -127201181 + (GGAA)n Simple_repeat Simple_repeat 1 29 0 219 139 0 0 chr10 18389015 18389051 -127200237 + (CA)n Simple_repeat Simple_repeat 2 37 0 21 36 0 0 chr10 18389121 18389149 -127200139 + AT_rich Low_complexity Low_complexity 1 28 0 1985 124 41 0 chr10 18389193 18389483 -127199805 - AluSx SINE Alu -9 303 2 22 35 0 0 chr10 18389592 18389621 -127199667 + AT_rich Low_complexity Low_complexity 1 29 0 300 27 0 0 chr10 18390508 18390545 -127198743 + (CA)n Simple_repeat Simple_repeat 2 38 0 220 208 42 28 chr10 18390574 18390646 -127198642 + (TATG)n Simple_repeat Simple_repeat 3 75 0 402 121 96 0 chr10 18390653 18390810 -127198478 + (TA)n Simple_repeat Simple_repeat 1 172 0 217 196 52 12 chr10 18390841 18391014 -127198274 + (TA)n Simple_repeat Simple_repeat 1 180 0 244 171 26 53 chr10 18391014 18391090 -127198198 + (TTATA)n Simple_repeat Simple_repeat 5 78 0 185 107 54 18 chr10 18391109 18391165 -127198123 + (TA)n Simple_repeat Simple_repeat 1 58 0 208 121 0 0 chr10 18392429 18392462 -127196826 + (CAAAAA)n Simple_repeat Simple_repeat 4 36 0 265 271 8 33 chr10 18392498 18392620 -127196668 - MER103 DNA DNA -46 120 2 1976 125 0 22 chr10 18393109 18393421 -127195867 + AluSg1 SINE Alu 5 309 0 1641 193 0 11 chr10 18393423 18393708 -127195580 + AluJo SINE Alu 1 282 -30 22 70 0 0 chr10 18393708 18393751 -127195537 + AT_rich Low_complexity Low_complexity 1 43 0 644 210 8 0 chr10 18394516 18394635 -127194653 + LTR31 LTR ERV1 499 618 -1 230 269 0 0 chr10 18394641 18394708 -127194580 - MER63 DNA MER1_type -36 1025 959 * 360 203 0 14 chr10 18394690 18394764 -127194524 - MER63 DNA MER1_type -310 750 678 636 226 221 0 chr10 18394980 18395170 -127194118 - MIR SINE MIR -22 240 9 320 282 18 9 chr10 18396669 18396779 -127192509 - L2 LINE L2 -8 3305 3195 6817 86 49 4 chr10 18397586 18398266 -127191022 - L1PA8 LINE L1 -2 6170 5464 1830 126 23 4 chr10 18398266 18398529 -127190759 - AluSx SINE Alu -12 300 33 6817 86 49 4 chr10 18398529 18398859 -127190429 - L1PA8 LINE L1 -708 5464 5150 3864 131 10 2 chr10 18398859 18399471 -127189817 + L1P LINE L1 4305 4921 -1225 378 0 0 0 chr10 18399471 18399513 -127189775 + (TA)n Simple_repeat Simple_repeat 2 43 0 2252 115 7 0 chr10 18399613 18399917 -127189371 - AluSx SINE Alu -6 306 1 1898 276 200 27 chr10 18399920 18400764 -127188524 + L2 LINE L2 1941 3020 -252 2410 160 70 5 chr10 18400764 18401164 -127188124 - MSTB LTR MaLR 0 426 1 1898 276 200 27 chr10 18401164 18401469 -127187819 + L2 LINE L2 3020 3271 -1 1478 154 62 19 chr10 18401898 18402157 -127187131 - AluJo SINE Alu -42 270 1 329 328 8 8 chr10 18402290 18402409 -127186879 - MIR SINE MIR -125 137 19 2460 90 0 0 chr10 18402520 18402831 -127186457 + AluSq SINE Alu 1 311 -2 253 385 17 17 chr10 18402835 18403014 -127186274 - L3 LINE CR1 -1339 238 60 1926 156 6 16 chr10 18403059 18403374 -127185914 + AluJb SINE Alu 1 312 0 2363 50 4 0 chr10 18403941 18404219 -127185069 + AluY SINE Alu 1 279 -32 187 54 54 0 chr10 18404222 18404259 -127185029 + A-rich Low_complexity Low_complexity 2 40 0 879 278 101 42 chr10 18404449 18404556 -127184732 + LTR16A LTR ERVL 51 150 -300 1798 162 126 26 chr10 18404556 18404945 -127184343 - MSTA LTR MaLR 0 428 1 879 278 101 42 chr10 18404945 18405215 -127184073 + LTR16A LTR ERVL 150 450 0 1581 173 20 34 chr10 18405381 18405676 -127183612 - AluJb SINE Alu -21 291 1 26 30 0 0 chr10 18405822 18405855 -127183433 + AT_rich Low_complexity Low_complexity 1 33 0 293 232 113 82 chr10 18407146 18407340 -127181948 + L2 LINE L2 3114 3313 0 2142 120 3 3 chr10 18407912 18408213 -127181075 - AluSx SINE Alu -11 301 1 205 231 19 0 chr10 18408534 18408586 -127180702 + (TA)n Simple_repeat Simple_repeat 1 53 0 248 217 0 0 chr10 18408618 18408664 -127180624 - LTR16C LTR ERVL 0 491 446 1766 172 14 3 chr10 18408672 18408969 -127180319 + AluSx SINE Alu 1 300 -12 729 118 28 28 chr10 18408972 18409150 -127180138 + GA-rich Low_complexity Low_complexity 3 180 0 856 234 85 55 chr10 18409157 18409225 -127180063 - LTR16C LTR ERVL -48 443 379 2873 184 28 4 chr10 18409225 18409731 -127179557 + LTR53 LTR ERVL 2 519 0 856 234 85 55 chr10 18409731 18410025 -127179263 - LTR16C LTR ERVL -112 379 70 2131 110 3 10 chr10 18410206 18410505 -127178783 + AluSx SINE Alu 1 297 -15 626 248 124 0 chr10 18410618 18410771 -127178517 - MER5A DNA MER1_type -5 184 13 187 325 57 31 chr10 18411952 18412146 -127177142 - L2 LINE L2 -222 3050 2852 432 171 0 0 chr10 18412687 18412763 -127176525 - Alu SINE Alu -1 311 236 1326 164 0 9 chr10 18412957 18413171 -127176117 - AluJo SINE Alu -100 212 1 5699 121 25 5 chr10 18413288 18414250 -127175038 - L1PB3 LINE L1 0 6154 5175 245 230 40 105 chr10 18414306 18414458 -127174830 + MLT1J2 LTR MaLR 1 142 -308 451 258 33 17 chr10 18414948 18415068 -127174220 + MIR SINE MIR 19 140 -122 820 276 144 29 chr10 18415084 18415719 -127173569 - L2 LINE L2 -4 3309 2605 3168 101 43 0 chr10 18416005 18416283 -127173005 + MER57B LTR ERV1 1 304 -130 210 71 0 0 chr10 18416283 18416311 -127172977 + (TTTA)n Simple_repeat Simple_repeat 4 31 0 3168 101 43 0 chr10 18416311 18416448 -127172840 + MER57B LTR ERV1 304 434 0 290 278 83 9 chr10 18416719 18416827 -127172461 + L1ME LINE L1 5387 5502 -619 180 0 0 0 chr10 18418062 18418082 -127171206 + (CA)n Simple_repeat Simple_repeat 2 21 0 541 264 68 0 chr10 18418745 18418908 -127170380 + MIR SINE MIR 79 252 -10 1593 180 37 19 chr10 18419221 18419543 -127169745 + MER65C LTR ERV1 1 328 -133 1979 131 70 59 chr10 18419543 18419699 -127169589 + THE1B LTR MaLR 3 156 -208 3937 40 0 0 chr10 18419699 18420149 -127169139 - L1PA4 LINE L1 0 6155 5706 1979 131 70 59 chr10 18420149 18420350 -127168938 + THE1B LTR MaLR 156 364 0 632 168 17 8 chr10 18420350 18420468 -127168820 + MER65C LTR ERV1 321 439 -22 1107 142 14 71 chr10 18420501 18420712 -127168576 - AluJo SINE Alu -27 285 87 290 157 0 0 chr10 18470713 18470764 -127118524 + Alu SINE Alu 252 302 0 2312 116 0 0 chr10 18471036 18471338 -127117950 - AluSx SINE Alu -10 302 1 1870 147 0 51 chr10 18471341 18471655 -127117633 - AluJo SINE Alu -12 300 3 2719 78 3 0 chr10 18471898 18472246 -127117042 - L1PA13 LINE L1 -26 6137 5789 2409 70 10 0 chr10 18472260 18472559 -127116729 - AluSp SINE Alu -11 302 1 2299 109 7 0 chr10 18473045 18473348 -127115940 + AluSx SINE Alu 1 305 -7 241 239 0 0 chr10 18474328 18474374 -127114914 + MIR SINE MIR 107 152 -110 279 258 161 0 chr10 18474545 18474669 -127114619 - MIR SINE MIR -32 230 87 1815 156 7 14 chr10 18474756 18475045 -127114243 - AluJb SINE Alu -25 287 1 212 314 20 0 chr10 18475059 18475110 -127114178 - L3b LINE CR1 -17 1566 1515 1866 130 0 0 chr10 18475147 18475409 -127113879 - AluSx SINE Alu -18 294 33 193 243 100 43 chr10 18475575 18475645 -127113643 + L2 LINE L2 3194 3267 -5 1076 226 37 66 chr10 18476649 18477105 -127112183 - L1MC5 LINE L1 -51 7910 7468 2509 59 0 7 chr10 18477108 18477415 -127111873 - AluY SINE Alu -6 305 1 325 0 0 0 chr10 18477429 18477464 -127111824 - U2 snRNA snRNA -153 35 1 400 214 40 24 chr10 18477464 18477590 -127111698 - L1MC5 LINE L1 -489 7472 7345 26 30 0 0 chr10 18477615 18477648 -127111640 + AT_rich Low_complexity Low_complexity 1 33 0 1413 218 64 107 chr10 18477696 18478404 -127110884 - L1MC5 LINE L1 -632 7329 6653 2251 116 0 3 chr10 18478404 18478705 -127110583 - AluSx SINE Alu -12 300 1 1413 218 64 107 chr10 18478705 18478801 -127110487 - L1MC5 LINE L1 -1308 6653 6554 293 176 0 0 chr10 18478908 18478959 -127110329 + FLAM SINE Alu 68 118 -15 592 280 69 69 chr10 18479331 18479489 -127109799 - HAL1b LINE L1 -683 665 508 2275 96 3 3 chr10 18479489 18479801 -127109487 - AluSq SINE Alu -1 312 1 592 280 69 69 chr10 18479801 18480092 -127109196 - HAL1b LINE L1 -839 509 216 882 145 0 0 chr10 18480229 18480360 -127108928 - FLAM_C SINE Alu -12 131 1 204 342 13 7 chr10 18480370 18480519 -127108769 + T-rich Low_complexity Low_complexity 4 153 0 1622 185 0 34 chr10 18480569 18480867 -127108421 - AluJo SINE Alu -4 308 21 2240 109 3 0 chr10 18481450 18481753 -127107535 - AluSg SINE Alu -6 304 1 1821 132 3 24 chr10 18483026 18483314 -127105974 + AluSx SINE Alu 1 282 -30 6928 30 2 0 chr10 18483326 18484122 -127105166 - L1PA3 LINE L1 -2 6153 5356 * 8114 31 0 4 chr10 18484109 18485088 -127104200 + L1PA3 LINE L1 4386 5360 -786 249 342 101 9 chr10 18485146 18485374 -127103914 + L2 LINE L2 2399 2647 -667 944 190 13 0 chr10 18485415 18485573 -127103715 - AluJb SINE Alu -26 286 127 1751 119 16 8 chr10 18485578 18485830 -127103458 + AluSg SINE Alu 42 295 -15 516 304 20 14 chr10 18485879 18486027 -127103261 + L2 LINE L2 3116 3264 -8 292 217 0 43 chr10 18486105 18486174 -127103114 + MER96B DNA MER1_type? 32 97 -320 595 133 0 0 chr10 18486177 18486267 -127103021 + MLT2B1 LTR ERVL 5 94 -421 701 150 18 9 chr10 18486274 18486387 -127102901 - AluJb SINE Alu -25 287 174 1748 185 76 47 chr10 18486400 18486806 -127102482 + MLT2B1 LTR ERVL 100 517 -3 277 154 0 0 chr10 18486806 18486854 -127102434 - MER96B DNA MER1_type? -101 316 269 941 148 6 60 chr10 18486854 18487036 -127102252 + AluJo SINE Alu 122 293 -19 923 133 4 124 chr10 18487043 18487208 -127102080 - MER96B DNA MER1_type? -164 253 123 1917 156 0 3 chr10 18487208 18487496 -127101792 + AluJb SINE Alu 1 287 -25 923 133 4 124 chr10 18487496 18487564 -127101724 - MER96B DNA MER1_type? -294 123 48 710 243 75 45 chr10 18487600 18487789 -127101499 + MER34B LTR ERV1 270 471 -94 1868 157 10 0 chr10 18487789 18488088 -127101200 - AluSg SINE Alu -8 302 1 710 243 75 45 chr10 18488088 18488166 -127101122 + MER34B LTR ERV1 471 545 -20 447 293 52 65 chr10 18488477 18488621 -127100667 - MIR SINE MIR -13 249 108 862 144 0 182 chr10 18488621 18488857 -127100431 + 7SK RNA RNA 1 193 0 447 293 52 65 chr10 18488857 18488941 -127100347 - MIR SINE MIR -154 108 24 471 196 149 0 chr10 18489124 18489231 -127100057 - L2 LINE L2 -1 3312 3190 2368 182 40 118 chr10 18489250 18490003 -127099285 + LTR8A LTR ERV1 34 727 0 219 188 43 29 chr10 18490015 18490084 -127099204 - L2 LINE L2 -122 3191 3122 1363 223 59 56 chr10 18490393 18490819 -127098469 - MER110A LTR ERV1 0 468 42 789 189 0 54 chr10 18492516 18492664 -127096624 - FLAM_C SINE Alu -2 141 2 459 265 86 86 chr10 18493229 18493542 -127095746 + HAL1 LINE L1 1322 1634 -873 426 311 72 17 chr10 18493581 18493761 -127095527 - MLT1J LTR MaLR -108 403 214 697 250 0 12 chr10 18493889 18494049 -127095239 - MLT1J LTR MaLR -325 186 29 640 289 155 34 chr10 18494099 18495009 -127094279 + L1ME3A LINE L1 4074 5093 -1053 234 0 0 0 chr10 18495203 18495229 -127094059 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 404 327 104 21 chr10 18495252 18495744 -127093544 + L1ME3A LINE L1 5347 5882 -288 2102 105 0 68 chr10 18495809 18496132 -127093156 + AluSx SINE Alu 1 301 -11 1167 170 66 0 chr10 18497407 18497619 -127091669 - THE1C LTR MaLR -1 374 149 927 170 0 7 chr10 18498663 18498810 -127090478 - FRAM SINE Alu -30 146 1 1790 150 46 29 chr10 18499136 18499443 -127089845 + AluSx SINE Alu 1 312 0 216 0 0 0 chr10 18499882 18499906 -127089382 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 697 250 78 96 chr10 18500187 18500467 -127088821 + MLT1H LTR MaLR 3 286 -263 1696 147 55 20 chr10 18500467 18500759 -127088529 + AluJo SINE Alu 10 311 -1 697 250 78 96 chr10 18500759 18500918 -127088370 + MLT1H LTR MaLR 286 446 -103 2159 146 48 31 chr10 18501090 18501446 -127087842 - THE1B LTR MaLR -2 362 1 2223 96 3 3 chr10 18501985 18502277 -127087011 + AluSg1 SINE Alu 1 292 -17 21 71 0 0 chr10 18502820 18502862 -127086426 + AT_rich Low_complexity Low_complexity 1 42 0 1700 166 15 0 chr10 18503788 18504059 -127085229 - AluJo SINE Alu -37 275 1 318 367 25 32 chr10 18504320 18504478 -127084810 - MIR3 SINE MIR -34 174 18 1914 155 10 0 chr10 18504873 18505177 -127084111 - AluJo SINE Alu -5 307 1 464 256 226 0 chr10 18505953 18506121 -127083167 - MIR SINE MIR -43 219 14 2078 120 0 40 chr10 18506446 18506770 -127082518 - AluSx SINE Alu -1 311 1 1750 184 29 41 chr10 18506802 18507119 -127082169 + Charlie4a DNA MER1_type 49 361 -1600 2187 116 0 3 chr10 18507119 18507422 -127081866 - AluSg SINE Alu -8 302 1 1750 184 29 41 chr10 18507422 18507517 -127081771 + Charlie4a DNA MER1_type 361 456 -52 748 263 80 9 chr10 18507988 18508201 -127081087 + MIR SINE MIR 15 242 -20 1496 166 3 55 chr10 18508390 18508679 -127080609 - MLT2D LTR ERVL 0 414 141 1298 190 38 90 chr10 18508681 18508900 -127080388 - MLT1A1 LTR MaLR -5 360 166 2140 141 0 0 chr10 18508900 18509206 -127080082 - AluSg SINE Alu -4 306 1 1298 190 38 90 chr10 18509206 18509354 -127079934 - MLT1A1 LTR MaLR -199 166 12 898 107 57 7 chr10 18509365 18509505 -127079783 - MLT2D LTR ERVL -267 147 1 910 264 100 73 chr10 18510138 18510374 -127078914 + LTR16B LTR ERVL 2 230 -234 1926 124 13 23 chr10 18510374 18510681 -127078607 + AluSx SINE Alu 1 304 -8 910 264 100 73 chr10 18510681 18510895 -127078393 + LTR16B LTR ERVL 230 464 0 287 341 39 0 chr10 18510971 18511100 -127078188 - MER94 DNA DNA 0 134 1 383 186 115 109 chr10 18511190 18511346 -127077942 - MER103 DNA DNA 0 166 10 937 225 42 80 chr10 18512240 18512686 -127076602 + MLT1A1 LTR MaLR 1 365 0 757 184 6 11 chr10 18512787 18512966 -127076322 + GA-rich Low_complexity Low_complexity 3 180 0 23 0 0 0 chr10 18513335 18513358 -127075930 + AT_rich Low_complexity Low_complexity 1 23 0 932 130 15 0 chr10 18513634 18513765 -127075523 + AluJo SINE Alu 3 135 -177 1179 95 0 0 chr10 18513918 18514065 -127075223 + AluSq SINE Alu 130 276 -37 820 36 27 0 chr10 18514070 18514181 -127075107 + (GAAA)n Simple_repeat Simple_repeat 2 115 0 1954 141 3 0 chr10 18515026 18515309 -127073979 - AluSx SINE Alu -13 299 16 7325 69 23 0 chr10 18515319 18516515 -127072773 - L1PA8 LINE L1 -1 6171 4967 1327 219 8 78 chr10 18516520 18516904 -127072384 + MLT2B1 LTR ERVL 8 364 -156 390 318 169 17 chr10 18516904 18517216 -127072072 + L2 LINE L2 2654 3010 -262 2136 101 3 48 chr10 18517499 18517815 -127071473 - AluSg SINE Alu -8 302 1 1824 115 0 0 chr10 18518626 18518870 -127070418 - AluSx SINE Alu -9 303 60 526 291 33 28 chr10 18519043 18519225 -127070063 - MER5A DNA MER1_type -6 183 1 2866 98 0 6 chr10 18519282 18519648 -127069640 + THE1B LTR MaLR 1 364 0 3531 74 7 2 chr10 18519875 18520323 -127068965 - L1PA13 LINE L1 -4 6159 5710 870 160 0 0 chr10 18520373 18520498 -127068790 + FLAM_A SINE Alu 1 125 -8 719 268 55 70 chr10 18521150 18521339 -127067949 + L2 LINE L2 7 190 -3124 2012 150 7 3 chr10 18521339 18521632 -127067656 + AluSx SINE Alu 1 294 -18 719 268 55 70 chr10 18521632 18521770 -127067518 + L2 LINE L2 190 329 -2985 1540 256 40 6 chr10 18522036 18522568 -127066720 + L1ME2 LINE L1 2797 3346 -2800 656 208 61 122 chr10 18522582 18522732 -127066556 + L1ME2 LINE L1 3510 3631 -2515 2246 113 0 0 chr10 18522732 18523025 -127066263 - AluSx SINE Alu -19 293 1 656 208 61 122 chr10 18523025 18523201 -127066087 + L1ME2 LINE L1 3631 3816 -2330 699 210 0 62 chr10 18523219 18523381 -127065907 + MSTD LTR MaLR 2 153 -243 781 114 35 0 chr10 18523419 18523533 -127065755 + MSTD LTR MaLR 279 396 0 257 264 23 11 chr10 18523533 18523620 -127065668 + L1ME2 LINE L1 3851 3938 -2208 846 165 0 119 chr10 18523627 18523821 -127065467 + AluSg/x SINE Alu 141 311 -1 362 228 0 0 chr10 18523836 18523920 -127065368 + L1MC/D LINE L1 5731 5814 -357 1572 254 103 15 chr10 18523923 18524506 -127064782 + L1ME2 LINE L1 3962 4595 -1551 2419 241 35 19 chr10 18524508 18525158 -127064130 + L1ME2 LINE L1 5493 6153 -11 632 241 67 27 chr10 18525189 18525413 -127063875 + L2 LINE L2 3080 3312 -1 2179 98 0 7 chr10 18525436 18525752 -127063536 - AluSq SINE Alu 0 314 1 736 240 35 66 chr10 18526028 18526316 -127062972 - MER97c DNA MER1_type? 0 1090 812 2195 104 0 7 chr10 18526401 18526698 -127062590 + AluSx SINE Alu 1 295 -17 2302 232 31 28 chr10 18526975 18527578 -127061710 - MER97b DNA MER1_type? -448 605 1 2227 107 10 0 chr10 18527636 18527927 -127061361 + AluSx SINE Alu 1 294 -18 614 173 8 0 chr10 18527930 18528063 -127061225 + (TA)n Simple_repeat Simple_repeat 1 134 0 2099 215 23 14 chr10 18528076 18528509 -127060779 - MER65C LTR ERV1 -24 437 1 2148 107 3 7 chr10 18528856 18529146 -127060142 + AluSx SINE Alu 2 290 -22 1425 180 77 15 chr10 18530142 18530414 -127058874 - AluJo SINE Alu -23 289 1 1509 221 179 2 chr10 18530440 18530869 -127058419 - MLT1D LTR MaLR 0 505 1 2188 110 10 0 chr10 18531004 18531295 -127057993 + AluSx SINE Alu 2 295 -17 4161 151 48 69 chr10 18531762 18531823 -127057465 - L1MB7 LINE L1 -8 6176 6115 2298 93 0 13 chr10 18531823 18532123 -127057165 + AluSx SINE Alu 1 296 -16 4161 151 48 69 chr10 18532123 18532727 -127056561 - L1MB7 LINE L1 -69 6115 5500 2343 142 72 5 chr10 18532727 18533128 -127056160 + MSTA LTR MaLR 1 428 0 4161 151 48 69 chr10 18533128 18533195 -127056093 - L1MB7 LINE L1 -684 5500 5433 2028 147 3 6 chr10 18533195 18533507 -127055781 - AluSq SINE Alu 0 313 3 4161 151 48 69 chr10 18533507 18533791 -127055497 - L1MB7 LINE L1 -751 5433 5186 1832 143 10 14 chr10 18534865 18535159 -127054129 - AluJb SINE Alu -19 293 1 1238 100 0 18 chr10 18535591 18535761 -127053527 + AluSx SINE Alu 1 167 -145 716 153 0 0 chr10 18535877 18535995 -127053293 + AluSp SINE Alu 1 118 -195 441 0 0 0 chr10 18536026 18536075 -127053213 + (TAAA)n Simple_repeat Simple_repeat 3 51 0 328 250 148 0 chr10 18536075 18536183 -127053105 + HsTC2 DNA Tc2 21 144 -1754 * 917 183 27 174 chr10 18536180 18536591 -127052697 + HsTC2 DNA Tc2 1281 1751 -147 210 71 0 0 chr10 18536591 18536619 -127052669 + (CA)n Simple_repeat Simple_repeat 1 28 0 1845 156 3 14 chr10 18536629 18536924 -127052364 - AluJb SINE Alu -20 292 1 917 183 27 174 chr10 18536924 18537017 -127052271 + HsTC2 DNA Tc2 1761 1890 -8 915 277 100 34 chr10 18537004 18537383 -127051905 - MLT1J LTR MaLR -14 497 94 * 727 249 38 33 chr10 18537387 18537600 -127051688 - MER58C DNA MER1_type -1 214 1 1975 113 85 3 chr10 18537638 18537921 -127051367 - AluSx SINE Alu -6 306 1 2087 123 0 13 chr10 18538094 18538396 -127050892 + AluSg SINE Alu 1 298 -12 3661 137 22 98 chr10 18538402 18538787 -127050501 + L1MB3 LINE L1 5440 5853 -330 2522 69 0 3 chr10 18538787 18539093 -127050195 + AluY SINE Alu 1 305 -6 3661 137 22 98 chr10 18539093 18539457 -127049831 + L1MB3 LINE L1 5853 6243 60 2132 87 0 7 chr10 18539457 18539746 -127049542 + L1PA7 LINE L1 5868 6154 0 2135 131 3 0 chr10 18539750 18540048 -127049240 + AluSp SINE Alu 1 299 -14 3661 137 22 98 chr10 18540048 18540097 -127049191 + L1MB3 LINE L1 6132 6183 0 2468 67 0 0 chr10 18540105 18540402 -127048886 + AluY SINE Alu 1 297 -14 1126 247 193 30 chr10 18540592 18540826 -127048462 + MER20B DNA MER1_type 1 195 -588 2612 178 74 17 chr10 18540826 18541086 -127048202 - MER41D LTR ERV1 0 557 313 2418 101 0 0 chr10 18541086 18541392 -127047896 + AluSq SINE Alu 1 306 -7 2612 178 74 17 chr10 18541392 18541658 -127047630 - MER41D LTR ERV1 -244 313 1 1126 247 193 30 chr10 18541658 18541962 -127047326 + MER20B DNA MER1_type 195 627 -156 2193 139 40 3 chr10 18542309 18542662 -127046626 - MLT2D LTR ERVL -48 366 1 2318 107 0 0 chr10 18543246 18543544 -127045744 - AluSg SINE Alu -12 298 1 509 332 71 5 chr10 18543644 18543855 -127045433 - MIR SINE MIR -15 247 23 2817 160 6 26 chr10 18543857 18544151 -127045137 - MER66B LTR ERV1 0 486 203 2215 117 7 0 chr10 18544151 18544458 -127044830 + AluSx SINE Alu 1 309 -3 2817 160 6 26 chr10 18544458 18544632 -127044656 - MER66B LTR ERV1 -283 203 27 1284 153 51 16 chr10 18544688 18544943 -127044345 + MER21A LTR ERV1 1 264 -667 2822 184 51 19 chr10 18544948 18545481 -127043807 + MER21A LTR ERV1 376 925 -6 1539 184 7 14 chr10 18546037 18546325 -127042963 + AluJb SINE Alu 1 286 -26 235 177 32 0 chr10 18546325 18546387 -127042901 + (TA)n Simple_repeat Simple_repeat 1 64 0 232 174 65 76 chr10 18546394 18546486 -127042802 - L1MC4 LINE L1 -1337 6705 6615 679 230 0 0 chr10 18547214 18547340 -127041948 + FLAM_C SINE Alu 2 127 -16 24 0 0 0 chr10 18547340 18547364 -127041924 + AT_rich Low_complexity Low_complexity 1 24 0 2955 77 25 10 chr10 18547938 18548330 -127040958 + MLT2A1 LTR ERVL 1 398 -46 309 73 41 77 chr10 18548331 18548586 -127040702 + (TA)n Simple_repeat Simple_repeat 1 245 0 221 145 29 43 chr10 18548589 18548658 -127040630 + (TATAA)n Simple_repeat Simple_repeat 2 69 0 185 0 0 39 chr10 18548772 18548798 -127040490 + (TA)n Simple_repeat Simple_repeat 1 25 0 257 0 0 29 chr10 18548821 18548855 -127040433 + (TA)n Simple_repeat Simple_repeat 1 33 0 240 82 49 33 chr10 18548875 18548936 -127040352 + (TA)n Simple_repeat Simple_repeat 2 63 0 315 309 33 26 chr10 18549034 18549186 -127040102 + L3 LINE CR1 977 1129 -448 1724 171 7 31 chr10 18549263 18549556 -127039732 + AluJo SINE Alu 3 288 -24 265 167 0 0 chr10 18549656 18549704 -127039584 + Alu SINE Alu 249 296 -5 291 266 42 56 chr10 18549704 18549847 -127039441 - L3 LINE CR1 -43 1534 1394 740 297 92 44 chr10 18549863 18550382 -127038906 - MLT1H LTR MaLR 0 549 6 2206 82 0 37 chr10 18550396 18550713 -127038575 + AluSx SINE Alu 1 306 0 779 185 15 0 chr10 18550803 18550938 -127038350 - MSTC LTR MaLR 0 428 292 1485 153 45 45 chr10 18550938 18551016 -127038272 - L1MA4 LINE L1 -5 6166 6090 4195 101 20 23 chr10 18551016 18551076 -127038212 - LTR43 LTR ERV1 -2 600 541 2235 109 13 0 chr10 18551076 18551380 -127037908 + AluSg SINE Alu 1 308 -2 4195 101 20 23 chr10 18551380 18551921 -127037367 - LTR43 LTR ERV1 -61 541 1 2138 123 0 0 chr10 18551927 18552220 -127037068 - AluSx SINE Alu -19 293 1 1485 153 45 45 chr10 18552220 18552508 -127036780 - L1MA4 LINE L1 -85 6086 5770 2097 118 6 13 chr10 18552508 18552822 -127036466 - AluSx SINE Alu 0 312 1 269 319 12 31 chr10 18552877 18553040 -127036248 + C-rich Low_complexity Low_complexity 6 165 0 1585 128 35 86 chr10 18553148 18553409 -127035879 - MSTC LTR MaLR -131 297 53 2265 117 0 0 chr10 18553409 18553708 -127035580 + AluSx SINE Alu 1 299 -13 1585 128 35 86 chr10 18553708 18553759 -127035529 - MSTC LTR MaLR -375 53 1 220 319 0 0 chr10 18553760 18553832 -127035456 - L3 LINE CR1 -262 1315 1244 424 243 19 9 chr10 18553924 18554031 -127035257 + MER5A DNA MER1_type 82 189 0 349 326 116 0 chr10 18554249 18554387 -127034901 + MLT1K LTR MaLR 60 213 -375 937 101 0 0 chr10 18554691 18554810 -127034478 - AluSg SINE Alu -191 119 1 1654 202 154 14 chr10 18556219 18556654 -127032634 + LTR54B LTR ERV1 1 496 -2 2103 109 0 0 chr10 18557278 18557584 -127031704 - AluSx SINE Alu 0 322 17 429 338 76 19 chr10 18557732 18557942 -127031346 + MLT1J2 LTR MaLR 99 320 -130 1677 163 10 42 chr10 18558054 18558360 -127030928 - AluSx SINE Alu -16 296 1 2000 122 0 0 chr10 18558793 18559080 -127030208 - AluSx SINE Alu 0 306 20 2406 82 0 7 chr10 18559082 18559387 -127029901 - AluSc SINE Alu -6 303 1 466 210 210 0 chr10 18559449 18559573 -127029715 - MLT1A1 LTR MaLR -215 150 1 598 257 155 54 chr10 18560243 18560262 -127029026 - L2 LINE L2 0 3313 3297 2016 108 22 0 chr10 18560262 18560530 -127028758 + AluSq SINE Alu 28 301 -12 598 257 155 54 chr10 18560530 18561061 -127028227 - L2 LINE L2 -16 3297 2711 1097 106 0 0 chr10 18561065 18561207 -127028081 - AluSg/x SINE Alu -17 293 152 414 317 48 59 chr10 18561231 18561390 -127027898 - L2 LINE L2 -626 2688 2532 2121 115 0 10 chr10 18561390 18561686 -127027602 - AluSx SINE Alu -9 303 11 414 317 48 59 chr10 18561686 18561816 -127027472 - L2 LINE L2 -782 2532 2402 186 296 14 0 chr10 18561963 18562034 -127027254 + L2 LINE L2 3200 3271 -1 757 211 54 11 chr10 18562392 18562577 -127026711 - MIR SINE MIR -48 214 22 516 305 45 0 chr10 18563103 18563280 -127026008 + MIR SINE MIR 78 262 0 1789 146 57 4 chr10 18563305 18563586 -127025702 - AluJb SINE Alu -16 296 1 2717 228 49 37 chr10 18564384 18565479 -127023809 + L1M4 LINE L1 2298 3405 -2741 899 137 0 39 chr10 18565486 18565639 -127023649 - AluSg/x SINE Alu -59 253 107 1696 114 5 106 chr10 18565801 18566169 -127023119 - L1MB8 LINE L1 -6 6172 5842 221 325 25 25 chr10 18566169 18566289 -127022999 + L2 LINE L2 3189 3308 -5 6510 188 15 8 chr10 18566974 18568099 -127021189 - L1M1 LINE L1 -6274 1291 159 1321 57 36 5 chr10 18568199 18568393 -127020895 - L1PA15-16 LINE L1 -3927 2922 2723 1231 191 0 0 chr10 18568411 18568621 -127020667 - MER2 DNA MER2_type -135 210 1 429 324 21 14 chr10 18568903 18569193 -127020095 - L1M4 LINE L1 -2166 3980 3689 573 275 141 36 chr10 18570140 18570275 -127019013 - MLT1K LTR MaLR -115 473 354 2736 115 36 7 chr10 18570275 18570691 -127018597 - MSTA LTR MaLR 0 428 1 573 275 141 36 chr10 18570691 18570831 -127018457 - MLT1K LTR MaLR -234 354 169 1176 151 5 19 chr10 18571578 18571784 -127017504 - MLT1A1 LTR MaLR -162 203 1 350 321 15 15 chr10 18571894 18572025 -127017263 - L2 LINE L2 0 3272 3142 394 287 106 21 chr10 18573497 18573712 -127015576 + MIR SINE MIR 31 262 0 2260 125 33 39 chr10 18573932 18574292 -127014996 - THE1B LTR MaLR -6 358 1 1948 178 19 26 chr10 18574991 18575368 -127013920 - MSTD LTR MaLR -22 374 1 1345 229 55 20 chr10 18575371 18575769 -127013519 + L1MC/D LINE L1 5267 5678 -2130 237 253 102 121 chr10 18576248 18576414 -127012874 + MIR SINE MIR 29 191 -71 1014 170 42 0 chr10 18577584 18577796 -127011492 - L1MB4 LINE L1 0 6180 5960 380 217 12 0 chr10 18577796 18577879 -127011409 - L1MB4 LINE L1 -614 5566 5483 182 37 37 0 chr10 18577883 18577910 -127011378 + (TTG)n Simple_repeat Simple_repeat 2 29 0 1440 137 0 109 chr10 18577913 18578242 -127011046 - AluJb SINE Alu -9 293 1 1164 175 5 10 chr10 18578264 18578464 -127010824 - AluJb SINE Alu -8 304 106 1112 291 79 19 chr10 18578703 18579173 -127010115 - L2 LINE L2 -432 2882 2385 574 199 51 80 chr10 18579335 18579611 -127009677 + L1ME1 LINE L1 3684 3951 -2195 27 29 0 0 chr10 18579819 18579853 -127009435 + AT_rich Low_complexity Low_complexity 1 34 0 1672 171 0 8 chr10 18579974 18580237 -127009051 - AluSx SINE Alu -43 269 9 8651 106 18 18 chr10 18580247 18581741 -127007547 - L1M1 LINE L1 -4219 3346 1778 5645 159 23 1 chr10 18581886 18583437 -127005851 - L1MA3 LINE L1 -326 5979 4381 225 94 0 0 chr10 18583437 18583469 -127005819 + (TG)n Simple_repeat Simple_repeat 2 33 0 5645 159 23 1 chr10 18583469 18583623 -127005665 - L1MA3 LINE L1 -1924 4381 4232 3432 194 54 32 chr10 18583779 18584745 -127004543 + L1ME1 LINE L1 5158 6158 -8 281 81 0 0 chr10 18585030 18585067 -127004221 + L1MA2 LINE L1 6154 6190 -114 234 295 60 116 chr10 18585794 18586147 -127003141 + L2 LINE L2 2896 3228 -44 332 218 252 14 chr10 18586213 18586360 -127002928 + LTR50 LTR ERVL 82 263 -532 304 217 43 26 chr10 18586392 18586507 -127002781 - L1M4 LINE L1 -2946 3698 3582 258 189 27 54 chr10 18586534 18586608 -127002680 + LTR50 LTR ERVL 498 569 -226 283 272 74 0 chr10 18586762 18586843 -127002445 + LTR33A LTR ERVL 437 523 0 815 121 25 32 chr10 18586961 18587118 -127002170 + L1MA5 LINE L1 6123 6278 -22 423 253 0 0 chr10 18587139 18587309 -127001979 + (TA)n Simple_repeat Simple_repeat 1 170 0 40 0 0 0 chr10 18587356 18587396 -127001892 + AT_rich Low_complexity Low_complexity 1 40 0 3257 236 82 19 chr10 18587448 18588607 -127000681 + L1MC4a LINE L1 2319 3550 -2596 192 354 46 0 chr10 18589141 18589206 -127000082 - MIR SINE MIR -155 107 40 1017 239 141 25 chr10 18589236 18589634 -126999654 + MER113 DNA MER1_type? 34 477 -44 594 270 61 74 chr10 18590063 18590389 -126998899 + L1MC4a LINE L1 5609 5930 -1878 42 0 0 0 chr10 18590590 18590632 -126998656 + AT_rich Low_complexity Low_complexity 1 42 0 365 214 0 45 chr10 18590640 18590752 -126998536 - L1ME4a LINE L1 -59 6062 5956 1045 168 5 37 chr10 18591087 18591277 -126998011 - AluJb SINE Alu -11 301 118 835 121 0 0 chr10 18591288 18591404 -126997884 - FLAM_C SINE Alu -5 138 23 4949 207 27 34 chr10 18591534 18592600 -126996688 - L1M4 LINE L1 -5483 1059 1 1243 187 137 20 chr10 18593198 18593541 -126995747 + MER31B LTR ERV1 40 422 -44 2314 89 3 13 chr10 18593545 18593859 -126995429 + AluSp SINE Alu 1 311 -2 21 0 0 0 chr10 18593974 18593995 -126995293 + AT_rich Low_complexity Low_complexity 1 21 0 397 181 131 20 chr10 18594412 18594521 -126994767 + L1M LINE L1 5260 5383 -805 2147 112 7 26 chr10 18594521 18594824 -126994464 + AluSx SINE Alu 1 297 -15 397 181 131 20 chr10 18594824 18594835 -126994453 + L1M LINE L1 5383 5391 -797 2057 149 10 0 chr10 18595183 18595492 -126993796 + AluJb SINE Alu 1 312 0 194 275 0 72 chr10 18595850 18595919 -126993369 - L2 LINE L2 -213 3059 2996 2265 92 10 0 chr10 18596001 18596293 -126992995 + AluY SINE Alu 1 295 -16 1072 143 65 0 chr10 18596293 18596461 -126992827 + AluSg/x SINE Alu 132 310 0 1311 173 41 0 chr10 18596462 18596705 -126992583 + L1ME LINE L1 5320 5572 -594 1570 113 10 63 chr10 18597027 18597328 -126991960 + AluY SINE Alu 1 285 -16 3535 143 31 5 chr10 18597789 18598362 -126990926 - L1MB5 LINE L1 -8 6166 5579 213 300 64 36 chr10 18598686 18598796 -126990492 - L2 LINE L2 -1 3312 3200 217 240 20 0 chr10 18599793 18599843 -126989445 - MIR3 SINE MIR -11 197 147 192 237 0 0 chr10 18599811 18599849 -126989439 - L3b LINE CR1 -26 1557 1520 * 2048 145 9 29 chr10 18599861 18600205 -126989083 - MER1B DNA MER1_type -2 337 1 232 265 88 0 chr10 18600206 18600274 -126989014 - MIR SINE MIR -70 138 65 277 214 54 0 chr10 18600932 18600988 -126988300 + MER4-int LTR ERV1 1112 1170 -5428 439 333 0 0 chr10 18600988 18601111 -126988177 + (TG)n Simple_repeat Simple_repeat 2 124 0 6163 114 30 3 chr10 18601517 18602611 -126986677 + L1PA16 LINE L1 5026 6156 -10 2392 97 0 3 chr10 18602611 18602921 -126986367 + AluSq SINE Alu 1 309 -4 6163 114 30 3 chr10 18602921 18602933 -126986355 + L1PA16 LINE L1 6156 6166 0 26 0 0 0 chr10 18603021 18603047 -126986241 + AT_rich Low_complexity Low_complexity 1 26 0 363 302 83 10 chr10 18603110 18603302 -126985986 + L1M4 LINE L1 4279 4484 -1662 321 284 125 57 chr10 18603729 18603905 -126985383 - MIR SINE MIR -67 195 8 209 258 0 16 chr10 18604482 18604544 -126984744 + G-rich Low_complexity Low_complexity 2 62 0 1784 37 14 5 chr10 18606354 18606571 -126982717 + L1PA5 LINE L1 5936 6154 0 636 277 83 14 chr10 18606671 18606960 -126982328 - HAL1 LINE L1 -848 1659 1351 483 207 0 0 chr10 18607117 18607204 -126982084 + MER58B DNA MER1_type 1 87 -254 791 149 137 19 chr10 18607210 18607371 -126981917 + MSTA LTR MaLR 200 379 -49 1265 158 51 8 chr10 18607381 18607615 -126981673 + MER58B DNA MER1_type 97 340 -1 1290 146 124 41 chr10 18607695 18607962 -126981326 - AluJb SINE Alu -13 289 1 255 268 0 0 chr10 18608074 18608145 -126981143 - L1ME3A LINE L1 -25 6145 6075 447 191 113 9 chr10 18608149 18608264 -126981024 - L1ME3A LINE L1 -282 5888 5762 4351 211 66 11 chr10 18608405 18609637 -126979651 - L1MEc LINE L1 -2857 3358 2110 1380 150 22 22 chr10 18609644 18609911 -126979377 - AluSx SINE Alu -6 306 40 267 342 42 0 chr10 18611052 18611172 -126978116 + L2 LINE L2 2934 3058 -214 1633 269 71 4 chr10 18611924 18612459 -126976829 + L1ME3A LINE L1 5597 6167 -3 245 204 112 82 chr10 18613984 18614082 -126975206 + MIR SINE MIR 70 170 -92 2537 184 28 2 chr10 18614272 18614740 -126974548 + L1MB2 LINE L1 5690 6169 -2 1550 196 7 14 chr10 18614749 18615040 -126974248 + AluJb SINE Alu 2 290 -22 278 275 61 61 chr10 18615101 18615232 -126974056 + HAL1 LINE L1 6 136 -2371 184 242 0 0 chr10 18616132 18616165 -126973123 + L2 LINE L2 3219 3251 -21 289 203 0 72 chr10 18616330 18616399 -126972889 - L2 LINE L2 -9 3304 3241 891 139 7 0 chr10 18616652 18616789 -126972499 + FLAM_C SINE Alu 1 138 -5 2229 145 25 30 chr10 18617049 18617415 -126971873 + THE1B LTR MaLR 1 364 0 381 228 123 57 chr10 18618181 18618392 -126970896 - MER102b DNA MER1_type 0 341 117 253 238 55 85 chr10 18618448 18618612 -126970676 + MIR3 SINE MIR 29 187 -21 411 108 0 181 chr10 18619035 18619323 -126969965 - L1P LINE L1 -804 5342 5107 35373 91 11 15 chr10 18619331 18623552 -126965736 + L1P LINE L1 2 4202 -1944 279 0 0 0 chr10 18623552 18623583 -126965705 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 35373 91 11 15 chr10 18623583 18624501 -126964787 + L1P LINE L1 4202 5122 -1024 280 241 60 12 chr10 18624717 18624800 -126964488 + L2 LINE L2 2605 2691 -623 2212 133 0 0 chr10 18624912 18625221 -126964067 - AluSx SINE Alu -3 309 1 1647 162 7 42 chr10 18625508 18625817 -126963471 + AluJo SINE Alu 1 298 -14 806 146 7 15 chr10 18625822 18625959 -126963329 + AluJo SINE Alu 1 136 -176 4142 84 9 0 chr10 18625960 18626485 -126962803 + L1PA10 LINE L1 5634 6163 -5 767 152 64 0 chr10 18627239 18627364 -126961924 + FLAM_C SINE Alu 1 133 0 306 231 125 29 chr10 18627450 18627554 -126961734 + L2 LINE L2 3134 3247 -25 453 217 200 0 chr10 18627785 18627900 -126961388 - MER91C DNA MER1_type -2 138 1 738 244 85 10 chr10 18628014 18628215 -126961073 - MLT1J LTR MaLR -295 216 1 208 333 48 0 chr10 18628319 18628403 -126960885 + L2 LINE L2 2584 2671 -643 1952 131 0 31 chr10 18628545 18628858 -126960430 - AluSx SINE Alu 0 304 1 659 206 38 60 chr10 18629120 18629304 -126959984 + MLT1E2 LTR MaLR 1 180 -446 1388 142 0 0 chr10 18629310 18629507 -126959781 - AluSg/x SINE Alu -14 296 100 1126 124 6 17 chr10 18629512 18629690 -126959598 + THE1C LTR MaLR 200 375 0 256 289 22 22 chr10 18629864 18629954 -126959334 + L1MC/D LINE L1 4886 4975 -1171 411 285 166 57 chr10 18630205 18630294 -126958994 + L1MC/D LINE L1 5278 5356 -795 7594 48 10 0 chr10 18630294 18631424 -126957864 + L1PA7 LINE L1 5014 6154 0 411 285 166 57 chr10 18631424 18631702 -126957586 + L1MC/D LINE L1 5356 5683 -468 2353 92 0 0 chr10 18633682 18633977 -126955311 + AluSg SINE Alu 1 295 -15 2606 36 0 3 chr10 18635454 18635756 -126953532 + AluY SINE Alu 1 301 -10 390 257 153 0 chr10 18636367 18636511 -126952777 - MIR SINE MIR 0 262 97 337 115 33 16 chr10 18637287 18637379 -126951909 - Alu SINE Alu 0 331 239 393 39 0 0 chr10 18637858 18637909 -126951379 + (TG)n Simple_repeat Simple_repeat 1 51 0 2057 149 10 0 chr10 18637974 18638283 -126951005 - AluJb SINE Alu 0 312 1 2214 96 13 26 chr10 18638642 18638944 -126950344 - AluSq SINE Alu -15 298 1 2236 91 0 14 chr10 18639568 18639902 -126949386 + AluSq SINE Alu 1 330 0 833 205 81 91 chr10 18640035 18640342 -126948946 + L1MC4 LINE L1 7457 7760 -282 2985 109 12 2 chr10 18640346 18640767 -126948521 + MER57B LTR ERV1 10 434 0 1071 201 66 18 chr10 18640767 18641040 -126948248 + L1MC4 LINE L1 7757 8042 0 205 261 0 0 chr10 18641653 18641699 -126947589 + L2 LINE L2 3255 3300 -13 1145 153 137 46 chr10 18642208 18642470 -126946818 + MER4B LTR ERV1 1 286 -324 1607 116 8 25 chr10 18642470 18642674 -126946614 - AluSg/x SINE Alu -5 307 106 2066 171 108 35 chr10 18642674 18643130 -126946158 + LTR2B LTR ERV1 1 489 -1 1607 116 8 25 chr10 18643130 18643166 -126946122 - AluSg/x SINE Alu -206 106 71 2401 97 6 17 chr10 18643166 18643516 -126945772 + MER4E LTR ERV1 434 779 0 282 106 0 0 chr10 18644602 18644649 -126944639 + (CAT)n Simple_repeat Simple_repeat 1 47 0 1905 159 0 24 chr10 18644652 18644948 -126944340 - AluJo SINE Alu -23 289 1 1600 287 139 47 chr10 18645920 18646018 -126943270 - MER115 DNA AcHobo -8 685 597 2123 143 0 9 chr10 18646018 18646333 -126942955 - AluSx SINE Alu 0 312 1 1600 287 139 47 chr10 18646333 18646854 -126942434 - MER115 DNA AcHobo -96 597 9 196 243 106 87 chr10 18647273 18647335 -126941953 + MIR3 SINE MIR 7 66 -187 2238 125 0 0 chr10 18647335 18647640 -126941648 - AluSx SINE Alu -7 305 1 196 243 106 87 chr10 18647640 18647714 -126941574 + MIR3 SINE MIR 66 160 -93 1600 134 115 7 chr10 18648279 18648548 -126940740 + AluSg1 SINE Alu 2 299 -10 2137 126 3 0 chr10 18648680 18648973 -126940315 - AluSq SINE Alu -19 294 1 1199 127 6 6 chr10 18650030 18650203 -126939085 - AluSc SINE Alu -11 298 126 2471 93 0 0 chr10 18650206 18650517 -126938771 - AluSx SINE Alu -1 311 1 1197 154 20 36 chr10 18651130 18651377 -126937911 + AluJo SINE Alu 67 309 -3 1956 110 46 7 chr10 18652514 18652796 -126936492 - AluSx SINE Alu -19 293 1 2302 115 0 0 chr10 18653336 18653648 -126935640 + AluJb SINE Alu 1 312 0 249 202 55 73 chr10 18653662 18653771 -126935517 + L1ME4a LINE L1 5997 6103 -18 270 195 6 0 chr10 18653774 18653830 -126935458 + Alu SINE Alu 1 39 -262 180 264 308 0 chr10 18653830 18653921 -126935367 + L2 LINE L2 3135 3253 -60 373 366 48 52 chr10 18655151 18655628 -126933660 + L2 LINE L2 2570 3044 -228 1937 115 52 0 chr10 18655676 18655984 -126933304 - AluSx SINE Alu 0 322 1 315 264 207 0 chr10 18656170 18656310 -126932978 + L2 LINE L2 3117 3285 -28 233 336 19 19 chr10 18656373 18656392 -126932896 + L2 LINE L2 3168 3186 -86 2434 90 0 0 chr10 18656392 18656692 -126932596 - AluSx SINE Alu -12 300 1 233 336 19 19 chr10 18656692 18656776 -126932512 + L2 LINE L2 3185 3271 -1 2144 114 0 3 chr10 18657431 18657729 -126931559 - AluSx SINE Alu -15 297 1 1595 106 66 4 chr10 18657897 18658153 -126931135 - L1MA8 LINE L1 -5 6286 6015 2301 95 0 0 chr10 18658251 18658546 -126930742 - AluSx SINE Alu -17 295 1 1171 164 16 62 chr10 18659455 18659562 -126929726 + L1MB3 LINE L1 5683 5793 -390 2475 50 17 3 chr10 18659562 18659863 -126929425 + AluY SINE Alu 1 305 -6 1171 164 16 62 chr10 18659863 18659999 -126929289 + L1MB3 LINE L1 5793 5915 -268 1842 151 0 3 chr10 18660080 18660365 -126928923 - AluJb SINE Alu -28 284 1 1277 139 13 21 chr10 18660365 18660602 -126928686 + L1MB3 LINE L1 5908 6142 -41 2264 117 0 0 chr10 18660602 18660902 -126928386 + AluSx SINE Alu 1 300 -12 2185 136 0 0 chr10 18661031 18661339 -126927949 + AluSx SINE Alu 1 308 -4 1092 186 36 5 chr10 18661339 18661559 -126927729 + AluJo SINE Alu 86 312 0 683 217 114 53 chr10 18661864 18662163 -126927125 + Charlie7 DNA MER1_type 323 639 -1973 471 211 62 16 chr10 18662183 18662311 -126926977 - MIR SINE MIR -20 242 109 299 188 0 0 chr10 18662369 18662417 -126926871 + Charlie7 DNA MER1_type 642 689 -1923 288 242 0 44 chr10 18662430 18662521 -126926767 + Charlie7 DNA MER1_type 2525 2611 -1 227 302 70 39 chr10 18662526 18662655 -126926633 - MIR3 SINE MIR -73 135 3 1532 171 3 58 chr10 18663378 18663687 -126925601 - AluJo SINE Alu -20 292 1 366 197 40 0 chr10 18663697 18663773 -126925515 - L1MC5 LINE L1 -723 7238 7160 268 358 17 17 chr10 18663825 18663865 -126925423 + Tigger8 DNA MER2_type 2 41 -625 1943 135 36 0 chr10 18663865 18664146 -126925142 - AluSx SINE Alu -21 291 1 268 358 17 17 chr10 18664146 18664225 -126925063 + Tigger8 DNA MER2_type 40 121 -545 2196 197 22 78 chr10 18664290 18664515 -126924773 + L1ME LINE L1 5119 5355 -811 2394 84 3 0 chr10 18664515 18664812 -126924476 - AluY SINE Alu -13 298 1 2196 197 22 78 chr10 18664812 18665095 -126924193 + L1ME LINE L1 5355 5590 -576 1777 137 4 11 chr10 18665095 18665373 -126923915 + AluSx SINE Alu 37 312 0 2196 197 22 78 chr10 18665373 18665587 -126923701 + L1ME LINE L1 5590 5814 -352 1823 139 57 0 chr10 18665727 18666007 -126923281 + AluJb SINE Alu 1 296 -16 563 305 45 0 chr10 18666032 18666209 -126923079 - MIR SINE MIR 0 262 78 2252 74 23 3 chr10 18666357 18666656 -126922632 - AluY SINE Alu -6 305 1 2516 57 0 3 chr10 18667044 18667340 -126921948 + AluY SINE Alu 1 295 -16 789 189 8 0 chr10 18667351 18667483 -126921805 + FLAM_A SINE Alu 1 133 0 423 282 68 48 chr10 18667791 18667997 -126921291 - L2 LINE L2 -101 3212 3003 2357 74 3 6 chr10 18667998 18668310 -126920978 + AluY SINE Alu 1 311 0 450 0 0 0 chr10 18668457 18668507 -126920781 + (TG)n Simple_repeat Simple_repeat 2 51 0 811 174 0 0 chr10 18668507 18668628 -126920660 - FLAM_A SINE Alu -9 124 4 666 165 128 0 chr10 18669521 18669630 -126919658 + FLAM_C SINE Alu 2 124 -19 238 336 92 0 chr10 18669954 18670073 -126919215 - L1ME LINE L1 -5610 460 331 1993 101 7 28 chr10 18670735 18671061 -126918227 - AluY SINE Alu 0 320 1 530 238 138 24 chr10 18671213 18671423 -126917865 + MIR SINE MIR 16 249 -13 656 138 0 60 chr10 18671573 18671689 -126917599 + FLAM_C SINE Alu 25 133 -10 2075 117 0 3 chr10 18671694 18671992 -126917296 + AluSx SINE Alu 1 297 -15 2357 69 10 3 chr10 18672000 18672305 -126916983 + AluY SINE Alu 5 311 0 180 0 0 0 chr10 18672654 18672674 -126916614 + (A)n Simple_repeat Simple_repeat 1 20 0 318 270 161 78 chr10 18672754 18673392 -126915896 + L1M2 LINE L1 543 1233 -5616 23 68 0 0 chr10 18673408 18673452 -126915836 + GC_rich Low_complexity Low_complexity 1 44 0 761 208 52 13 chr10 18673769 18673923 -126915365 - FRAM SINE Alu -6 160 1 210 150 0 0 chr10 18674042 18674082 -126915206 + (T)n Simple_repeat Simple_repeat 1 40 0 1950 86 8 4 chr10 18674083 18674340 -126914948 - AluSx SINE Alu -54 258 1 369 58 0 0 chr10 18674365 18674417 -126914871 + (TG)n Simple_repeat Simple_repeat 2 53 0 876 95 44 14 chr10 18674429 18674575 -126914713 + LTR7 LTR ERV1 1 199 -251 301 197 53 40 chr10 18674597 18674673 -126914615 + MIR SINE MIR 55 131 -131 553 113 12 0 chr10 18674695 18674775 -126914513 + AluS SINE Alu 222 302 -7 2248 115 3 0 chr10 18674779 18675084 -126914204 + AluSx SINE Alu 1 306 -6 2995 214 121 38 chr10 18675084 18676146 -126913142 + L1ME1 LINE L1 4180 5466 -700 2320 108 0 0 chr10 18676146 18676452 -126912836 + AluSq SINE Alu 1 306 -7 2995 214 121 38 chr10 18676452 18677151 -126912137 + L1ME1 LINE L1 5466 6105 -61 2068 114 21 0 chr10 18677156 18677446 -126911842 + AluSx SINE Alu 1 296 -16 21 36 0 0 chr10 18677488 18677516 -126911772 + AT_rich Low_complexity Low_complexity 1 28 0 469 260 143 0 chr10 18677961 18678115 -126911173 - MIR SINE MIR -66 196 21 201 365 138 0 chr10 18678193 18678352 -126910936 - L2 LINE L2 -202 3070 2890 2112 122 3 0 chr10 18678506 18678794 -126910494 + AluSx SINE Alu 1 289 -23 2054 69 77 0 chr10 18678993 18679289 -126909999 + AluY SINE Alu 1 311 0 2281 118 0 10 chr10 18679290 18679604 -126909684 - L1PB3 LINE L1 -14 6140 5830 1826 142 52 0 chr10 18679791 18680080 -126909208 - AluSx SINE Alu -8 304 1 1718 221 46 67 chr10 18680929 18681241 -126908047 - L1ME1 LINE L1 -5 6230 5913 685 203 10 99 chr10 18681241 18681312 -126907976 + MER45A DNA AcHobo 4 80 -1501 2169 120 0 0 chr10 18681312 18681613 -126907675 + AluY SINE Alu 1 301 -10 685 203 10 99 chr10 18681613 18681733 -126907555 + MER45A DNA AcHobo 80 178 0 1718 221 46 67 chr10 18681733 18681928 -126907360 - L1ME1 LINE L1 -322 5913 5736 756 185 8 0 chr10 18681928 18682058 -126907230 + FLAM_C SINE Alu 2 132 -1 1718 221 46 67 chr10 18682058 18682159 -126907129 - L1ME1 LINE L1 -499 5736 5634 2352 78 3 0 chr10 18682160 18682453 -126906835 - AluY SINE Alu -17 294 1 1202 140 95 0 chr10 18682775 18683019 -126906269 - L1ME1 LINE L1 -594 5641 5448 1457 146 43 94 chr10 18683019 18683347 -126905941 - AluJo SINE Alu -1 311 1 2072 108 0 11 chr10 18683349 18683635 -126905653 - AluSg SINE Alu -19 291 9 1202 140 95 0 chr10 18683635 18683771 -126905517 - L1ME1 LINE L1 -787 5448 5276 661 164 86 0 chr10 18683776 18683892 -126905396 - FLAM_C SINE Alu -5 138 13 1713 223 20 9 chr10 18683900 18684353 -126904935 - L1ME1 LINE L1 -951 5264 4807 6551 39 6 15 chr10 18684355 18685153 -126904135 - SVA Other Other 0 1386 596 212 175 0 53 chr10 18685229 18685286 -126904002 + T-rich Low_complexity Low_complexity 1 54 0 4353 69 53 63 chr10 18685585 18686314 -126902974 - SVA Other Other -520 866 145 12840 88 65 5 chr10 18686349 18688367 -126900921 - HERVH LTR ERV1 -5574 2139 1 688 86 0 19 chr10 18688369 18688474 -126900814 - LTR7 LTR ERV1 -2 448 346 2229 106 0 7 chr10 18688804 18689105 -126900183 + AluSx SINE Alu 1 299 -13 261 282 0 64 chr10 18689229 18689307 -126899981 - MIR3 SINE MIR -28 180 108 378 153 203 51 chr10 18690218 18690336 -126898952 - Charlie2 DNA MER1_type -2 2860 2725 2496 257 22 39 chr10 18690534 18690623 -126898665 - L1ME1 LINE L1 -2605 3610 3521 925 115 0 0 chr10 18690623 18690753 -126898535 + FLAM_C SINE Alu 1 130 -3 2496 257 22 39 chr10 18690753 18691792 -126897496 - L1ME1 LINE L1 -2694 3521 2501 3067 268 56 79 chr10 18691796 18692504 -126896784 - L1ME1 LINE L1 -4025 2371 1648 309 119 0 34 chr10 18692504 18692563 -126896725 + MER2 DNA MER2_type 23 79 -266 3067 268 56 79 chr10 18692563 18692905 -126896383 - L1ME1 LINE L1 -4748 1648 1300 2243 65 3 55 chr10 18692905 18693212 -126896076 - AluSp SINE Alu -22 291 1 3067 268 56 79 chr10 18693212 18693425 -126895863 - L1ME1 LINE L1 -5096 1300 1084 2453 59 0 19 chr10 18693425 18693732 -126895556 - AluY SINE Alu -10 301 1 3067 268 56 79 chr10 18693732 18694438 -126894850 - L1ME1 LINE L1 -5312 1084 403 2291 94 3 3 chr10 18694438 18694736 -126894552 - AluSq SINE Alu -15 298 1 3067 268 56 79 chr10 18694736 18695097 -126894191 - L1ME1 LINE L1 -5993 403 35 23 33 0 0 chr10 18695100 18695130 -126894158 + AT_rich Low_complexity Low_complexity 1 30 0 887 284 97 15 chr10 18695230 18695698 -126893590 + MLT1G1 LTR MaLR 1 557 -38 2403 83 3 0 chr10 18695716 18696016 -126893272 - AluSp SINE Alu -10 303 3 217 286 0 0 chr10 18696089 18696138 -126893150 - L2 LINE L2 -10 3303 3255 330 298 76 19 chr10 18696407 18696565 -126892723 + L2 LINE L2 3147 3313 0 261 362 52 33 chr10 18696559 18696672 -126892616 - L2 LINE L2 -547 2767 2647 * 1487 233 19 21 chr10 18696672 18697046 -126892242 - MLT1A2 LTR MaLR 0 374 2 261 362 52 33 chr10 18697046 18697142 -126892146 - L2 LINE L2 -667 2647 2554 2269 110 0 3 chr10 18697293 18697603 -126891685 - AluSx SINE Alu -3 309 1 38 22 0 0 chr10 18697870 18697915 -126891373 + AT_rich Low_complexity Low_complexity 1 45 0 344 212 82 41 chr10 18698424 18698570 -126890718 - L1ME4a LINE L1 -2 6119 5968 684 167 147 13 chr10 18698741 18698891 -126890397 - MIR SINE MIR -11 251 82 346 286 82 27 chr10 18698896 18699121 -126890167 - L1ME4a LINE L1 -433 5688 5503 1651 48 19 5 chr10 18699164 18699373 -126889915 - AluSx SINE Alu -100 212 1 183 42 0 0 chr10 18701433 18701457 -126887831 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 264 301 120 36 chr10 18701739 18701935 -126887353 + MIR SINE MIR 34 252 -10 873 231 23 14 chr10 18702497 18702713 -126886575 - MER20 DNA MER1_type -1 218 1 21 36 0 0 chr10 18703296 18703324 -126885964 + AT_rich Low_complexity Low_complexity 1 28 0 537 240 8 16 chr10 18703377 18703502 -126885786 + L2 LINE L2 3190 3313 0 542 268 174 13 chr10 18703578 18703813 -126885475 + L2 LINE L2 1888 2160 -1154 852 228 36 36 chr10 18703847 18704071 -126885217 + MIR SINE MIR 2 225 -37 1035 315 11 14 chr10 18704101 18704463 -126884825 + L2 LINE L2 2185 2545 -769 1661 143 25 7 chr10 18704468 18704748 -126884540 + LTR12 LTR ERV1 1 285 -429 350 200 11 0 chr10 18704749 18704839 -126884449 + LTR30 LTR ERV1 553 643 -79 567 139 0 0 chr10 18704840 18704926 -126884362 + LTR12 LTR ERV1 481 566 -148 752 311 118 35 chr10 18704926 18705435 -126883853 + L2 LINE L2 2540 3125 -188 1744 163 36 7 chr10 18705435 18705736 -126883552 + AluJo SINE Alu 1 310 -2 752 311 118 35 chr10 18705736 18705942 -126883346 + L2 LINE L2 3125 3313 0 774 154 0 8 chr10 18706104 18706227 -126883061 - AluSq/x SINE Alu -190 122 1 198 313 21 21 chr10 18706583 18706679 -126882609 + MIR SINE MIR 107 202 -60 388 346 110 53 chr10 18706700 18707097 -126882191 + L2 LINE L2 2318 2754 -560 2596 65 0 0 chr10 18707097 18707405 -126881883 + AluY SINE Alu 1 308 -3 388 346 110 53 chr10 18707405 18707536 -126881752 + L2 LINE L2 2754 2876 -438 310 239 91 11 chr10 18707607 18707695 -126881593 + MIR SINE MIR 162 256 -6 427 327 40 55 chr10 18709259 18709534 -126879754 + MER21B LTR ERV1 32 302 -561 * 761 206 0 0 chr10 18709533 18709693 -126879595 + ALR/Alpha Satellite centromeric 1 160 -12 469 267 58 58 chr10 18709833 18709853 -126879435 + MER21B LTR ERV1 471 490 -441 1422 193 48 12 chr10 18709853 18710185 -126879103 - MER2 DNA MER2_type 0 344 1 469 267 58 58 chr10 18710185 18710441 -126878847 + MER21B LTR ERV1 489 780 -151 2333 70 0 0 chr10 18710525 18710841 -126878447 - AluY SINE Alu 0 316 1 768 227 33 93 chr10 18712229 18712347 -126876941 - HAL1 LINE L1 -1534 973 849 2227 87 3 3 chr10 18712347 18712634 -126876654 + AluY SINE Alu 16 302 -9 768 227 33 93 chr10 18712634 18712881 -126876407 - HAL1 LINE L1 -1658 849 630 446 204 0 20 chr10 18712889 18712987 -126876301 - L1MEc LINE L1 -2309 4117 4022 2321 190 91 57 chr10 18712987 18713688 -126875600 - MER50 LTR ERV1 0 734 10 3616 222 46 18 chr10 18713689 18714828 -126874460 - L1MEc LINE L1 -2396 4030 2860 1563 147 124 8 chr10 18714841 18715106 -126874182 - AluJb SINE Alu -16 296 1 3368 166 25 40 chr10 18715106 18715783 -126873505 - L1MEc LINE L1 -3948 2478 1938 1733 167 27 10 chr10 18715783 18716082 -126873206 - AluJo SINE Alu -8 304 1 3368 166 25 40 chr10 18716082 18716298 -126872990 - L1MEc LINE L1 -4488 1938 1720 21 0 0 0 chr10 18716515 18716536 -126872752 + AT_rich Low_complexity Low_complexity 1 21 0 945 191 0 0 chr10 18716924 18717092 -126872196 + FAM SINE Alu 1 168 -7 214 331 194 21 chr10 18717683 18718018 -126871270 + L2 LINE L2 2076 2468 -846 793 256 40 18 chr10 18718915 18719138 -126870150 + MIR SINE MIR 6 233 -29 220 217 0 22 chr10 18719847 18719893 -126869395 + CT-rich Low_complexity Low_complexity 1 45 0 1152 159 53 4 chr10 18720220 18720465 -126868823 + ORSL DNA AcHobo 2 258 -17 672 174 162 0 chr10 18720594 18720761 -126868527 - L1MB3 LINE L1 -9 6174 5981 29 28 0 0 chr10 18720782 18720818 -126868470 + AT_rich Low_complexity Low_complexity 1 36 0 189 107 0 0 chr10 18721556 18721584 -126867704 + (CATATA)n Simple_repeat Simple_repeat 6 33 0 312 262 303 20 chr10 18721609 18721853 -126867435 - L1MC4a LINE L1 -1635 6173 5861 2455 74 0 10 chr10 18722707 18723016 -126866272 - AluY SINE Alu -5 306 1 278 333 91 8 chr10 18723253 18723385 -126865903 - MIR SINE MIR 0 262 120 2050 126 17 0 chr10 18723448 18723741 -126865547 - AluSq SINE Alu -15 298 1 392 301 57 53 chr10 18723853 18724062 -126865226 - L2 LINE L2 -20 3293 3084 1046 251 178 11 chr10 18724258 18724617 -126864671 - L2 LINE L2 -2414 900 482 2895 175 50 38 chr10 18724651 18725367 -126863921 - L1MC2 LINE L1 -55 6289 5565 368 311 105 20 chr10 18725372 18725983 -126863305 - L1MC2 LINE L1 -1115 5031 4369 1913 93 20 96 chr10 18726006 18726349 -126862939 - AluYb8 SINE Alu -1 317 1 391 309 0 25 chr10 18726349 18726511 -126862777 - L2 LINE L2 -1600 1714 1557 364 301 98 30 chr10 18726630 18726763 -126862525 - MIR3 SINE MIR -63 145 4 186 252 243 0 chr10 18727676 18727783 -126861505 - MIR SINE MIR -3 259 127 249 239 0 0 chr10 18730037 18730083 -126859205 + MIR SINE MIR 5 50 -212 188 367 0 0 chr10 18730085 18730145 -126859143 + MIR SINE MIR 201 260 -2 688 233 133 79 chr10 18730573 18731120 -126858168 - MLT1G1 LTR MaLR 0 567 4 2124 136 3 0 chr10 18731542 18731837 -126857451 + AluSx SINE Alu 1 296 -16 447 284 18 0 chr10 18731969 18732078 -126857210 + L2 LINE L2 3150 3260 -12 325 320 0 8 chr10 18732942 18733070 -126856218 - MER94 DNA DNA -4 130 4 26 30 0 0 chr10 18733201 18733234 -126856054 + AT_rich Low_complexity Low_complexity 1 33 0 212 231 0 0 chr10 18734019 18734058 -126855230 + L2 LINE L2 3263 3301 -12 1491 182 38 40 chr10 18734299 18734580 -126854708 - L1MB7 LINE L1 -25 6159 5878 2020 126 7 10 chr10 18734580 18734873 -126854415 - AluSx SINE Alu -20 292 1 1491 182 38 40 chr10 18734873 18734938 -126854350 - L1MB7 LINE L1 -306 5878 5814 * 3575 177 84 21 chr10 18734929 18735884 -126853404 - L1MB2 LINE L1 -4 6167 5148 1088 213 36 115 chr10 18735914 18736530 -126852758 - L1MB2 LINE L1 -2559 3587 3021 * 3429 138 98 44 chr10 18736515 18736736 -126852552 - L1MB3 LINE L1 -1 6182 5974 1626 186 59 3 chr10 18736736 18737026 -126852262 - AluJo SINE Alu -6 306 1 3429 138 98 44 chr10 18737026 18737507 -126851781 - L1MB3 LINE L1 -209 5974 5442 844 245 69 8 chr10 18737520 18737895 -126851393 - L1MB2 LINE L1 -3104 3042 2645 1114 224 162 13 chr10 18739188 18739640 -126849648 - L1ME2 LINE L1 -3 6232 5723 1402 264 44 6 chr10 18739690 18740190 -126849098 - L1ME2 LINE L1 -3265 2950 2432 1396 198 21 11 chr10 18740489 18740772 -126848516 - AluJb SINE Alu -22 290 5 567 266 149 17 chr10 18740833 18741236 -126848052 - L1ME2 LINE L1 -5215 1181 726 21 0 0 0 chr10 18741855 18741876 -126847412 + AT_rich Low_complexity Low_complexity 1 21 0 1370 122 18 62 chr10 18742692 18743117 -126846171 - LTR42 LTR ERVL -11 484 1 2076 117 3 10 chr10 18743693 18743991 -126845297 - AluSg SINE Alu -14 296 1 1936 116 12 61 chr10 18744507 18744834 -126844454 + AluSx SINE Alu 1 311 -1 1847 139 7 7 chr10 18745776 18746077 -126843211 - AluSx SINE Alu -11 301 1 531 258 174 7 chr10 18747068 18747223 -126842065 + MER5A DNA MER1_type 9 189 0 781 216 36 21 chr10 18747340 18747534 -126841754 - MIR3 SINE MIR -9 199 3 2356 55 0 0 chr10 18748551 18748826 -126840462 + AluY SINE Alu 1 275 -36 216 0 0 0 chr10 18748826 18748850 -126840438 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 292 264 9 5 chr10 18748935 18749044 -126840244 - L2 LINE L2 -1 3271 3115 216 184 20 0 chr10 18749055 18749104 -126840184 - MIR SINE MIR -15 247 198 246 283 157 26 chr10 18749132 18749323 -126839965 - L1MDa LINE L1 -4179 2361 2146 691 236 25 19 chr10 18749398 18749555 -126839733 - MIR SINE MIR -92 170 13 447 329 123 18 chr10 18750914 18751419 -126837869 - L1MC4a LINE L1 -1914 5894 5337 400 352 53 11 chr10 18751438 18751702 -126837586 - L1MC4a LINE L1 -861 5285 5011 1211 179 54 8 chr10 18753160 18753468 -126835820 - MLT1A1 LTR MaLR 0 365 8 2006 88 0 33 chr10 18754269 18754543 -126834745 - AluSq SINE Alu -48 265 1 25 0 0 0 chr10 18755083 18755108 -126834180 + AT_rich Low_complexity Low_complexity 1 25 0 26 30 0 0 chr10 18756027 18756060 -126833228 + AT_rich Low_complexity Low_complexity 1 33 0 23 33 0 0 chr10 18757690 18757720 -126831568 + AT_rich Low_complexity Low_complexity 1 30 0 426 326 132 10 chr10 18757792 18758096 -126831192 - L1ME LINE L1 -297 5824 5484 901 194 148 5 chr10 18758736 18758932 -126830356 + MER58A DNA MER1_type 1 224 0 741 275 18 18 chr10 18758932 18759153 -126830135 + Charlie2 DNA MER1_type 68 288 -2494 922 220 153 3 chr10 18759177 18759459 -126829829 + Charlie2 DNA MER1_type 1855 2178 -684 * 1092 231 176 12 chr10 18759457 18759947 -126829341 + Charlie2 DNA MER1_type 2287 2856 -6 2333 100 0 3 chr10 18760042 18760352 -126828936 + AluSg SINE Alu 1 309 -1 21 0 0 0 chr10 18760735 18760756 -126828532 + AT_rich Low_complexity Low_complexity 1 21 0 830 163 0 0 chr10 18761411 18761540 -126827748 - FRAM SINE Alu -16 160 32 1592 156 22 18 chr10 18763105 18763407 -126825881 + AluJb SINE Alu 6 308 0 269 235 90 57 chr10 18763585 18763686 -126825602 + MER5A DNA MER1_type 18 127 -51 1325 226 0 3 chr10 18763686 18763991 -126825297 - AluY SINE Alu -5 306 3 269 235 90 57 chr10 18763991 18764045 -126825243 + MER5A DNA MER1_type 127 178 0 2292 84 0 3 chr10 18764442 18764763 -126824525 + AluY SINE Alu 1 311 0 2130 78 29 46 chr10 18765193 18765500 -126823788 - AluY SINE Alu -8 303 2 23 33 0 0 chr10 18765799 18765829 -126823459 + AT_rich Low_complexity Low_complexity 1 30 0 2041 173 34 32 chr10 18766357 18766905 -126822383 + MLT2A2 LTR ERVL 1 554 0 48 88 0 0 chr10 18767386 18767511 -126821777 + AT_rich Low_complexity Low_complexity 1 125 0 1089 120 20 0 chr10 18767566 18767716 -126821572 - AluSg/x SINE Alu -16 294 142 317 24 0 0 chr10 18767716 18767757 -126821531 + MADE1 DNA Mariner 40 80 0 24 32 0 0 chr10 18767757 18767788 -126821500 + AT_rich Low_complexity Low_complexity 1 31 0 1743 126 59 0 chr10 18768216 18768486 -126820802 - AluSx SINE Alu -20 292 7 371 260 104 46 chr10 18768953 18769126 -126820162 - MIR SINE MIR -3 259 77 1877 168 3 0 chr10 18769257 18769555 -126819733 - AluJo SINE Alu -13 299 1 2333 87 3 0 chr10 18770219 18770517 -126818771 + AluSq SINE Alu 1 299 -14 1884 152 18 18 chr10 18770704 18771039 -126818249 - MER1B DNA MER1_type 0 337 3 1148 100 6 0 chr10 18772018 18772178 -126817110 - L1PA10 LINE L1 -5 6163 6003 531 261 133 18 chr10 18772322 18772548 -126816740 - MIR SINE MIR -1 261 10 206 32 32 0 chr10 18772753 18772784 -126816504 + (TTTG)n Simple_repeat Simple_repeat 4 35 0 1923 122 37 0 chr10 18772784 18773054 -126816234 - AluSx SINE Alu -32 280 1 243 61 0 0 chr10 18773244 18773277 -126816011 + (TG)n Simple_repeat Simple_repeat 2 34 0 24 0 0 0 chr10 18773601 18773625 -126815663 + AT_rich Low_complexity Low_complexity 1 24 0 564 193 13 2 chr10 18774008 18774028 -126815260 + MER58A DNA MER1_type 30 48 -2372 2492 52 0 23 chr10 18774028 18774337 -126814951 - AluY SINE Alu -8 303 2 564 193 13 2 chr10 18774337 18774475 -126814813 + MER58A DNA MER1_type 48 224 0 287 348 62 48 chr10 18776643 18776933 -126812355 + L2 LINE L2 2976 3269 -3 198 217 43 0 chr10 18777535 18777581 -126811707 - L2 LINE L2 -20 3252 3205 21 0 0 0 chr10 18777627 18777648 -126811640 + AT_rich Low_complexity Low_complexity 1 21 0 655 268 143 0 chr10 18778263 18778487 -126810801 - MIR SINE MIR 0 262 7 213 276 17 0 chr10 18778887 18778945 -126810343 - L2 LINE L2 -1484 1830 1772 210 273 151 29 chr10 18778961 18779133 -126810155 - L2 LINE L2 -1744 1570 1378 * 1269 279 116 74 chr10 18779128 18780447 -126808841 + L2 LINE L2 1847 3222 -91 209 286 0 0 chr10 18780542 18780591 -126808697 + L2 LINE L2 3220 3268 -4 222 118 0 0 chr10 18781537 18781571 -126807717 + (TA)n Simple_repeat Simple_repeat 2 35 0 751 268 47 37 chr10 18782479 18782778 -126806510 + AluSp SINE Alu 2 303 0 1416 174 10 84 chr10 18783364 18783675 -126805613 - AluJo SINE Alu -24 288 1 2249 113 0 7 chr10 18784711 18785012 -126804276 + AluSx SINE Alu 1 299 -13 2335 101 3 0 chr10 18785373 18785670 -126803618 + AluSx SINE Alu 3 300 -12 1961 152 0 10 chr10 18786300 18786603 -126802685 - AluJb SINE Alu -12 300 1 2288 98 3 19 chr10 18786966 18787144 -126802144 - AluSx SINE Alu 0 312 140 2141 110 3 35 chr10 18787144 18787461 -126801827 - AluSq SINE Alu -6 307 1 2288 98 3 19 chr10 18787461 18787599 -126801689 - AluSx SINE Alu -172 140 1 184 296 80 0 chr10 18787923 18788011 -126801277 + MIR3 SINE MIR 108 202 -6 2180 130 0 0 chr10 18788704 18789005 -126800283 - AluSx SINE Alu -11 301 1 242 29 29 0 chr10 18789054 18789089 -126800199 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 544 96 0 12 chr10 18789093 18789176 -126800112 - L1PA13 LINE L1 -19 6144 6063 1094 141 13 0 chr10 18789176 18789332 -126799956 - AluSx SINE Alu -154 158 1 4618 86 5 0 chr10 18789420 18790022 -126799266 - L1PA12 LINE L1 -44 6124 5520 1856 158 0 20 chr10 18790452 18790755 -126798533 - AluJb SINE Alu -5 307 11 2098 102 0 41 chr10 18791063 18791389 -126797899 - AluSq SINE Alu 0 314 1 1684 147 51 17 chr10 18792123 18792416 -126796872 + AluJo SINE Alu 1 303 -9 2118 125 3 0 chr10 18792439 18792734 -126796554 - AluSx SINE Alu -16 296 1 297 326 0 23 chr10 18792774 18792906 -126796382 - MIR SINE MIR -132 130 2 375 226 49 123 chr10 18793302 18793454 -126795834 - MIR SINE MIR -40 222 87 1805 171 3 7 chr10 18793454 18793753 -126795535 + AluJo SINE Alu 1 298 -14 375 226 49 123 chr10 18793753 18793804 -126795484 - MIR SINE MIR -175 87 34 2047 141 0 10 chr10 18793892 18794197 -126795091 - AluSx SINE Alu 0 312 11 457 356 24 10 chr10 18794568 18794776 -126794512 + MIR SINE MIR 41 251 -11 208 196 18 18 chr10 18795017 18795073 -126794215 + (TTATG)n Simple_repeat Simple_repeat 4 59 0 437 323 90 0 chr10 18795718 18795907 -126793381 - MIR SINE MIR 0 262 57 1909 39 0 13 chr10 18795917 18796150 -126793138 + AluY SINE Alu 81 310 -1 2795 88 3 0 chr10 18796784 18797147 -126792141 - THE1B LTR MaLR 0 364 1 2288 111 0 3 chr10 18797549 18797855 -126791433 + AluSx SINE Alu 1 305 -7 251 314 83 0 chr10 18798370 18798491 -126790797 - L3 LINE CR1 -342 1235 1105 185 266 127 13 chr10 18798624 18798703 -126790585 - L3 LINE CR1 -972 605 518 565 92 20 0 chr10 18798713 18798811 -126790477 + (TA)n Simple_repeat Simple_repeat 2 101 0 1629 171 55 0 chr10 18798816 18799091 -126790197 - AluJo SINE Alu -22 290 1 1055 167 142 54 chr10 18799346 18799586 -126789702 + AluJo SINE Alu 39 299 -13 504 261 72 43 chr10 18799928 18800135 -126789153 + MIR SINE MIR 2 214 -48 2081 168 28 91 chr10 18800649 18800969 -126788319 - MLT1C LTR MaLR 0 467 187 1995 124 38 7 chr10 18800969 18801259 -126788029 - AluSc SINE Alu -10 299 1 2081 168 28 91 chr10 18801259 18801433 -126787855 - MLT1C LTR MaLR -280 187 4 4833 198 67 76 chr10 18801437 18802818 -126786470 - MLT1C-int LTR MaLR -1 1370 2 2164 187 34 55 chr10 18802826 18803297 -126785991 - MLT1C LTR MaLR -6 461 1 2418 87 0 0 chr10 18803320 18803630 -126785658 + AluSg SINE Alu 1 310 0 1733 143 56 4 chr10 18805393 18805659 -126783629 - AluJo SINE Alu -32 280 1 315 325 32 0 chr10 18805689 18805815 -126783473 - L2 LINE L2 0 3272 3143 2154 132 3 3 chr10 18805892 18806188 -126783100 + AluSx SINE Alu 3 298 -14 4710 183 46 16 chr10 18806869 18808732 -126780556 - L1MB4 LINE L1 -10 6406 4487 537 107 49 0 chr10 18808734 18808856 -126780432 + (TG)n Simple_repeat Simple_repeat 2 129 0 738 214 6 13 chr10 18808856 18809015 -126780273 - L1MB4 LINE L1 -1893 4489 4332 361 271 156 44 chr10 18809022 18809247 -126780041 - L1MB4 LINE L1 -6022 362 113 1959 170 14 24 chr10 18809247 18809445 -126779843 + MER47A DNA MER2_type 1 195 -2128 3070 168 54 87 chr10 18809445 18810257 -126779031 - LTR1 LTR ERV1 0 785 1 1959 170 14 24 chr10 18810257 18810428 -126778860 + MER47A DNA MER2_type 195 366 0 307 317 0 10 chr10 18810429 18810530 -126778758 - L1MB4 LINE L1 -6271 113 14 2255 106 0 0 chr10 18810730 18811023 -126778265 + AluSx SINE Alu 1 293 -19 22 0 0 0 chr10 18811452 18811474 -126777814 + AT_rich Low_complexity Low_complexity 1 22 0 2147 141 0 3 chr10 18811726 18812039 -126777249 - AluSx SINE Alu 0 312 1 214 198 18 63 chr10 18812551 18812662 -126776626 + CT-rich Low_complexity Low_complexity 4 109 0 822 254 10 5 chr10 18813982 18814191 -126775097 + MIR SINE MIR 51 260 -2 836 226 62 25 chr10 18814225 18814250 -126775038 - MER33 DNA MER1_type -2333 252 229 2179 131 0 0 chr10 18814250 18814548 -126774740 - AluSx SINE Alu -14 298 1 836 226 62 25 chr10 18814548 18814765 -126774523 - MER33 DNA MER1_type -2356 229 1 1466 161 9 85 chr10 18815024 18815341 -126773947 - AluJb SINE Alu -19 293 1 669 185 22 99 chr10 18815842 18816023 -126773265 + MER63B DNA MER1_type 2 195 -1493 2204 105 0 10 chr10 18816023 18816328 -126772960 - AluSg SINE Alu -8 302 1 669 185 22 99 chr10 18816328 18816350 -126772938 + MER63B DNA MER1_type 195 1035 -27 266 316 31 0 chr10 18816489 18816587 -126772701 - MIR3 SINE MIR -6 202 102 338 159 14 0 chr10 18817088 18817157 -126772131 + (TA)n Simple_repeat Simple_repeat 1 70 0 2125 138 0 3 chr10 18817157 18817454 -126771834 - AluJb SINE Alu -15 297 2 598 158 271 0 chr10 18817459 18817592 -126771696 + MER58B DNA MER1_type 173 341 0 653 103 0 0 chr10 18818457 18818544 -126770744 + L1PA5 LINE L1 10 96 -6365 * 39454 68 3 3 chr10 18818529 18824386 -126764902 + L1PA5 LINE L1 612 6469 0 27 0 0 0 chr10 18824386 18824413 -126764875 + AT_rich Low_complexity Low_complexity 1 27 0 546 313 50 5 chr10 18825533 18825746 -126763542 - MIR SINE MIR -6 256 36 1983 108 73 3 chr10 18825824 18826112 -126763176 - AluSx SINE Alu -4 308 1 702 221 51 33 chr10 18826216 18826444 -126762844 - MIR SINE MIR 0 262 38 1888 110 11 0 chr10 18826965 18827229 -126762059 - AluSx SINE Alu -4 308 42 203 309 0 0 chr10 18827275 18827330 -126761958 + L2 LINE L2 3206 3260 -12 1093 288 91 32 chr10 18827399 18827861 -126761427 - LTR16C LTR ERVL -2 489 1 2345 103 6 6 chr10 18828112 18828423 -126760865 + AluSx SINE Alu 1 311 -1 253 292 82 55 chr10 18829430 18829649 -126759639 - L2 LINE L2 -1 3312 3088 1953 140 34 0 chr10 18829673 18829966 -126759322 + AluSx SINE Alu 1 303 -9 217 315 43 0 chr10 18829992 18830084 -126759204 - L2 LINE L2 -344 2970 2875 988 218 5 5 chr10 18830187 18830393 -126758895 - MER67C LTR ERV1 0 710 505 404 219 67 9 chr10 18830394 18830499 -126758789 - MER67C LTR ERV1 -374 336 226 348 24 0 0 chr10 18830596 18830637 -126758651 + (TG)n Simple_repeat Simple_repeat 2 42 0 1807 168 10 89 chr10 18830674 18830807 -126758481 - MLT2D LTR ERVL -48 366 224 1937 157 3 6 chr10 18830807 18831119 -126758169 + AluJo SINE Alu 1 311 -1 1807 168 10 89 chr10 18831119 18831377 -126757911 - MLT2D LTR ERVL -190 224 6 197 358 11 0 chr10 18831422 18831517 -126757771 - L2 LINE L2 -823 2491 2396 586 133 0 0 chr10 18832567 18832657 -126756631 + MLT2D LTR ERVL 6 95 -319 21 0 0 0 chr10 18832955 18832976 -126756312 + AT_rich Low_complexity Low_complexity 1 21 0 1832 169 10 7 chr10 18833489 18833784 -126755504 + AluJo SINE Alu 3 298 -14 31 0 0 0 chr10 18835932 18835963 -126753325 + AT_rich Low_complexity Low_complexity 1 31 0 416 299 33 65 chr10 18836032 18836216 -126753072 - MER5A DNA MER1_type -1 188 11 1513 199 29 0 chr10 18836607 18836888 -126752400 + AluJo SINE Alu 4 292 -20 199 194 81 0 chr10 18837247 18837309 -126751979 - MIR SINE MIR -3 259 193 2082 116 3 13 chr10 18837333 18837635 -126751653 - AluSx SINE Alu -1 311 13 215 322 76 25 chr10 18838052 18838170 -126751118 + L3 LINE CR1 1442 1565 -12 357 24 0 0 chr10 18838518 18838560 -126750728 + (A)n Simple_repeat Simple_repeat 1 42 0 2311 77 3 0 chr10 18839221 18839519 -126749769 - AluY SINE Alu -12 299 1 2121 121 0 0 chr10 18841264 18841574 -126747714 - AluSx SINE Alu 0 312 3 1887 131 0 58 chr10 18842220 18842533 -126746755 - AluJb SINE Alu -17 295 1 481 201 38 72 chr10 18842665 18842874 -126746414 + Charlie4 DNA MER1_type 1754 1955 -6 287 333 0 0 chr10 18842875 18842944 -126746344 - L2 LINE L2 -47 3225 3157 330 67 0 0 chr10 18843033 18843078 -126746210 + (TG)n Simple_repeat Simple_repeat 2 46 0 228 364 30 43 chr10 18843092 18843196 -126746092 - L2 LINE L2 -472 2842 2738 1058 181 5 11 chr10 18843196 18843384 -126745904 - L1MB3 LINE L1 0 6183 5997 228 364 30 43 chr10 18843384 18843510 -126745778 - L2 LINE L2 -576 2738 2615 744 273 74 25 chr10 18843512 18843879 -126745409 - L2 LINE L2 -839 2475 2091 2544 122 8 0 chr10 18844142 18844495 -126744793 - L1PA16 LINE L1 -9 6157 5802 24 32 0 0 chr10 18844664 18844695 -126744593 + AT_rich Low_complexity Low_complexity 1 31 0 2452 68 0 0 chr10 18844695 18844988 -126744300 - AluY SINE Alu -18 293 1 235 268 36 0 chr10 18846369 18846425 -126742863 - L2 LINE L2 -12 3301 3244 296 268 27 9 chr10 18846910 18847022 -126742266 - L1ME3A LINE L1 -3 6167 6054 32 0 0 0 chr10 18847062 18847094 -126742194 + AT_rich Low_complexity Low_complexity 1 32 0 1640 263 64 45 chr10 18847128 18847642 -126741646 - L1ME3A LINE L1 -153 6017 5487 2054 113 0 13 chr10 18847642 18847942 -126741346 - AluSx SINE Alu -15 297 2 1640 263 64 45 chr10 18847942 18848050 -126741238 - L1ME3A LINE L1 -683 5487 5383 728 280 138 58 chr10 18848051 18848335 -126740953 - L1ME3A LINE L1 -817 5329 5069 1831 176 0 0 chr10 18848335 18848650 -126740638 - AluSx SINE Alu 0 315 1 728 280 138 58 chr10 18848650 18849057 -126740231 - L1ME3A LINE L1 -1077 5069 4581 248 186 17 0 chr10 18849069 18849128 -126740160 + CT-rich Low_complexity Low_complexity 3 62 0 1877 135 7 11 chr10 18849132 18849406 -126739882 - AluSx SINE Alu -39 273 1 635 242 26 0 chr10 18849413 18849566 -126739722 - L1ME3A LINE L1 -1980 4166 4010 1711 184 7 3 chr10 18849574 18849879 -126739409 - AluJo SINE Alu -6 306 1 842 170 7 0 chr10 18850958 18851093 -126738195 + AluJo SINE Alu 1 136 -176 647 223 0 23 chr10 18851768 18851898 -126737390 - FLAM_A SINE Alu -6 127 1 2017 103 44 0 chr10 18852049 18852344 -126736944 - AluSx SINE Alu 0 307 1 213 39 0 0 chr10 18853776 18853802 -126735486 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 1399 129 0 0 chr10 18853819 18854012 -126735276 - AluSx SINE Alu -115 197 5 3743 145 14 47 chr10 18854981 18855614 -126733674 - LTR9 LTR ERV1 0 612 1 2234 113 0 25 chr10 18855761 18856081 -126733207 + AluSx SINE Alu 1 312 0 2085 121 13 0 chr10 18856750 18857056 -126732232 - AluSx SINE Alu -2 310 1 301 306 0 25 chr10 18857088 18857209 -126732079 - L1ME LINE L1 -305 5816 5699 373 333 44 39 chr10 18857891 18858071 -126731217 - L1ME LINE L1 -456 5665 5485 309 244 22 68 chr10 18858675 18858811 -126730477 + MER5B DNA MER1_type 29 164 -25 600 229 19 45 chr10 18858830 18858987 -126730301 + MER5B DNA MER1_type 1 153 -25 263 380 28 28 chr10 18859027 18859380 -126729908 - L2 LINE L2 -1879 1435 1083 201 267 143 19 chr10 18859576 18859681 -126729607 + MER5B DNA MER1_type 60 177 -1 820 225 6 0 chr10 18860663 18860832 -126728456 - AluJb SINE Alu -10 302 133 2789 72 3 53 chr10 18861050 18861424 -126727864 + THE1A LTR MaLR 1 355 0 317 271 33 66 chr10 18861930 18862052 -126727236 - L2 LINE L2 -5 3267 3150 36 0 0 0 chr10 18862363 18862399 -126726889 + AT_rich Low_complexity Low_complexity 1 36 0 36 97 0 0 chr10 18862447 18862560 -126726728 + AT_rich Low_complexity Low_complexity 1 113 0 1021 122 0 0 chr10 18862775 18862906 -126726382 + FLAM_C SINE Alu 1 131 -2 883 214 0 79 chr10 18863248 18863463 -126725825 + MER63A DNA MER1_type 2 199 -11 194 256 0 23 chr10 18863758 18863801 -126725487 - MIR SINE MIR -29 233 192 1492 166 9 116 chr10 18863906 18864047 -126725241 + AluJo SINE Alu 2 88 -214 2319 77 3 10 chr10 18864047 18864358 -126724930 + AluY SINE Alu 1 309 -2 1492 166 9 116 chr10 18864358 18864553 -126724735 + AluJo SINE Alu 88 302 0 195 341 47 54 chr10 18864600 18864729 -126724559 + L2 LINE L2 3186 3313 0 638 130 0 0 chr10 18864731 18864823 -126724465 + FRAM SINE Alu 16 107 -69 231 88 0 0 chr10 18864845 18864879 -126724409 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 198 327 0 0 chr10 18865274 18865329 -126723959 + L2 LINE L2 2762 2816 -498 630 223 37 78 chr10 18865356 18865470 -126723818 + MIR SINE MIR 38 139 -123 1613 174 3 43 chr10 18865470 18865769 -126723519 + AluJo SINE Alu 1 287 -25 630 223 37 78 chr10 18865769 18865873 -126723415 + MIR SINE MIR 139 246 -16 207 338 113 15 chr10 18865883 18866087 -126723201 + L2 LINE L2 2837 3060 -212 1827 160 3 3 chr10 18866409 18866691 -126722597 - AluSx SINE Alu -27 285 4 2046 113 13 7 chr10 18867788 18868089 -126721199 - AluSx SINE Alu -9 303 1 27 49 0 0 chr10 18868475 18868516 -126720772 + AT_rich Low_complexity Low_complexity 1 41 0 492 211 82 34 chr10 18868808 18868955 -126720333 + MER117 DNA MER1_type 1 154 -43 2131 106 0 3 chr10 18869186 18869522 -126719766 - AluSq SINE Alu 0 335 1 406 230 105 47 chr10 18870144 18870335 -126718953 - L2 LINE L2 0 3313 3112 394 362 49 21 chr10 18870560 18870748 -126718540 - MER5A DNA MER1_type 0 178 1 327 267 107 15 chr10 18870784 18870915 -126718373 + MIR SINE MIR 2 144 -118 2214 105 6 13 chr10 18871362 18871675 -126717613 + AluSq SINE Alu 3 313 0 252 0 0 0 chr10 18872285 18872313 -126716975 + (TTTTA)n Simple_repeat Simple_repeat 3 30 0 1620 134 111 4 chr10 18872323 18872585 -126716703 - AluJb SINE Alu -22 290 1 359 312 50 22 chr10 18872696 18872860 -126716428 - MIR SINE MIR -62 146 9 803 177 0 0 chr10 18873377 18873501 -126715787 + FLAM_C SINE Alu 2 125 -18 210 71 0 0 chr10 18873740 18873768 -126715520 + (TAA)n Simple_repeat Simple_repeat 3 30 0 256 301 86 11 chr10 18873769 18873862 -126715426 - MIR SINE MIR 0 262 163 22 35 0 0 chr10 18873990 18874019 -126715269 + AT_rich Low_complexity Low_complexity 1 29 0 764 218 0 8 chr10 18874210 18874343 -126714945 + FLAM_A SINE Alu 1 132 -1 2048 99 4 4 chr10 18875626 18875899 -126713389 + AluSx SINE Alu 1 273 -39 21 0 0 0 chr10 18875946 18875967 -126713321 + AT_rich Low_complexity Low_complexity 1 21 0 42588 39 0 3 chr10 18876423 18881523 -126707765 - L1PA3 LINE L1 -1062 5084 2 8092 24 0 0 chr10 18881525 18882563 -126706725 + L1PA3 LINE L1 5104 6141 -14 619 202 22 45 chr10 18883418 18883596 -126705692 - Charlie7 DNA MER1_type -1 2611 2438 288 324 20 0 chr10 18883587 18883689 -126705599 - Charlie7 DNA MER1_type -2507 105 2 * 326 272 48 16 chr10 18883798 18883923 -126705365 - L1MC4 LINE L1 -10 8032 7904 256 284 128 28 chr10 18884063 18884345 -126704943 - L1MC4 LINE L1 -227 7815 7506 259 319 140 41 chr10 18884411 18884703 -126704585 + MARNA DNA Mariner 12 332 -254 22 56 0 0 chr10 18886554 18886590 -126702698 + AT_rich Low_complexity Low_complexity 1 36 0 21 36 0 0 chr10 18889808 18889836 -126699452 + AT_rich Low_complexity Low_complexity 1 28 0 364 219 50 106 chr10 18890588 18890709 -126698579 + Charlie8 DNA MER1_type 34 146 -184 2282 57 7 0 chr10 18890709 18891016 -126698272 + AluY SINE Alu 1 309 0 364 219 50 106 chr10 18891016 18891053 -126698235 + Charlie8 DNA MER1_type 146 184 -146 2248 93 3 0 chr10 18891153 18891442 -126697846 - AluSp SINE Alu -23 290 1 1243 187 137 20 chr10 18891446 18891789 -126697499 - MER31B LTR ERV1 -44 422 40 779 158 141 5 chr10 18891890 18892074 -126697214 + Charlie5 DNA MER1_type 32 240 -2372 339 244 0 12 chr10 18892074 18892156 -126697132 + Charlie5 DNA MER1_type 2544 2624 0 756 235 6 6 chr10 18892200 18892366 -126696922 + MLT1E LTR MaLR 1 166 -427 1232 152 66 0 chr10 18892382 18892579 -126696709 + MLT1E LTR MaLR 377 586 -7 915 154 40 0 chr10 18892632 18892781 -126696507 + L1PA15 LINE L1 5992 6146 -19 2178 117 0 0 chr10 18892792 18893091 -126696197 + AluSx SINE Alu 1 299 -13 890 206 143 5 chr10 18893329 18893552 -126695736 + HERVL40 LTR ERVL 5277 5530 0 1486 249 83 9 chr10 18893553 18893999 -126695289 + LTR40a LTR ERVL 2 480 -39 249 187 80 27 chr10 18894261 18894306 -126694982 + MIR3 SINE MIR 105 157 -51 1953 130 3 54 chr10 18894306 18894656 -126694632 + AluSq SINE Alu 1 313 0 249 187 80 27 chr10 18894656 18894685 -126694603 + MIR3 SINE MIR 157 183 -25 190 339 0 0 chr10 18894720 18894782 -126694506 - L2 LINE L2 -1 3312 3251 * 620 236 191 0 chr10 18894750 18894949 -126694339 - MIR SINE MIR -25 237 1 183 310 95 26 chr10 18894960 18895076 -126694212 - L2 LINE L2 -6 3307 3184 338 221 74 0 chr10 18895779 18895874 -126693414 - LTR33 LTR ERVL -307 214 113 209 236 70 108 chr10 18896711 18896868 -126692420 + MER5A DNA MER1_type 39 189 0 2018 113 20 30 chr10 18897052 18897352 -126691936 - AluSx SINE Alu -15 297 1 196 221 44 59 chr10 18897628 18897696 -126691592 - L2 LINE L2 -3169 145 79 888 152 0 23 chr10 18897914 18898046 -126691242 - FLAM_A SINE Alu -4 129 1 3026 185 16 4 chr10 18898553 18899104 -126690184 + MER68 LTR ERV1 5 562 0 731 225 75 21 chr10 18899318 18899731 -126689557 + LTR54 LTR ERV1 1 495 -15 1407 170 9 0 chr10 18899731 18899960 -126689328 - AluJo SINE Alu -17 295 65 207 0 0 0 chr10 18900025 18900048 -126689240 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1483 161 25 49 chr10 18900052 18900337 -126688951 + AluJo SINE Alu 14 291 -21 2184 112 0 7 chr10 18900344 18900639 -126688649 + AluSq SINE Alu 3 295 -18 696 289 128 22 chr10 18900645 18901048 -126688240 - L2 LINE L2 -90 3223 2761 2158 115 3 0 chr10 18901229 18901517 -126687771 + AluSx SINE Alu 1 289 -23 913 163 62 0 chr10 18901630 18901790 -126687498 - AluSp SINE Alu -9 304 135 1545 166 4 4 chr10 18952189 18952436 -126636852 + AluSx SINE Alu 39 285 -27 207 338 113 15 chr10 18952758 18952962 -126636326 - L2 LINE L2 -212 3060 2837 278 227 93 0 chr10 18952972 18953047 -126636241 - MIR SINE MIR -16 246 165 1221 148 5 63 chr10 18953076 18953299 -126635989 - AluJo SINE Alu -25 287 78 1915 164 3 0 chr10 18953735 18954033 -126635255 + AluJo SINE Alu 1 299 -13 359 260 104 46 chr10 18954164 18954337 -126634951 + MIR SINE MIR 77 259 -3 214 155 52 0 chr10 18954699 18954757 -126634531 + GA-rich Low_complexity Low_complexity 5 65 0 1050 167 142 54 chr10 18955110 18955350 -126633938 + AluJo SINE Alu 39 299 -13 564 261 72 43 chr10 18955692 18955899 -126633389 + MIR SINE MIR 2 214 -48 283 314 83 0 chr10 18956622 18956743 -126632545 - L3 LINE CR1 -342 1235 1105 204 299 115 11 chr10 18956876 18956963 -126632325 - L3 LINE CR1 -972 605 510 532 87 22 0 chr10 18956965 18957057 -126632231 + (TA)n Simple_repeat Simple_repeat 2 95 0 1155 175 55 33 chr10 18957062 18957336 -126631952 - AluJo SINE Alu -22 290 11 2022 100 7 34 chr10 18958046 18958337 -126630951 - AluSg SINE Alu -24 286 4 278 328 25 25 chr10 18959163 18959285 -126630003 - MIR SINE MIR -121 141 20 2098 62 4 0 chr10 18959454 18959713 -126629575 + AluY SINE Alu 35 294 -17 2054 129 0 0 chr10 18961246 18961554 -126627734 - AluSx SINE Alu 0 312 5 1663 154 0 26 chr10 18961680 18961953 -126627335 - AluJb SINE Alu -36 276 11 2079 102 0 41 chr10 18962261 18962603 -126626685 - AluSq SINE Alu 0 330 1 1670 147 51 17 chr10 18963338 18963631 -126625657 + AluJo SINE Alu 1 303 -9 2120 122 3 0 chr10 18963654 18963949 -126625339 - AluSx SINE Alu -16 296 1 333 326 0 23 chr10 18963989 18964121 -126625167 - MIR SINE MIR -132 130 2 392 243 66 59 chr10 18964517 18964669 -126624619 - MIR SINE MIR -40 222 70 1306 168 15 27 chr10 18964669 18964931 -126624357 + AluJo SINE Alu 1 259 -53 1500 147 35 12 chr10 18965059 18965318 -126623970 - AluSx SINE Alu -37 275 11 513 359 24 9 chr10 18965689 18965901 -126623387 + MIR SINE MIR 41 255 -7 208 196 18 18 chr10 18966138 18966194 -126623094 + (TTATG)n Simple_repeat Simple_repeat 4 59 0 492 323 90 0 chr10 18966839 18967028 -126622260 - MIR SINE MIR 0 262 57 1894 39 0 13 chr10 18967038 18967271 -126622017 + AluY SINE Alu 81 310 -1 302 317 35 42 chr10 18967514 18967656 -126621632 - L1M LINE L1 -2412 5396 5256 2941 88 3 0 chr10 18967906 18968269 -126621019 - THE1B LTR MaLR 0 364 1 541 152 33 11 chr10 18968670 18968762 -126620526 + AluSx SINE Alu 2 95 -218 2046 113 13 7 chr10 18969199 18969500 -126619788 + AluSx SINE Alu 1 303 -9 2223 110 0 28 chr10 18970597 18970914 -126618374 + AluSx SINE Alu 4 311 -1 1609 90 42 0 chr10 18971067 18971279 -126618009 + AluSx SINE Alu 70 290 -20 24 32 0 0 chr10 18971709 18971740 -126617548 + AT_rich Low_complexity Low_complexity 1 31 0 326 24 0 0 chr10 18971740 18971781 -126617507 - MADE1 DNA Mariner 0 80 40 1091 120 20 0 chr10 18971781 18971931 -126617357 + AluSg/x SINE Alu 142 294 -16 48 88 0 0 chr10 18971986 18972111 -126617177 + AT_rich Low_complexity Low_complexity 1 125 0 2086 171 34 32 chr10 18972592 18973140 -126616148 - MLT2A2 LTR ERVL 0 554 1 31 0 0 0 chr10 18975392 18975423 -126613865 + AT_rich Low_complexity Low_complexity 1 31 0 416 299 33 65 chr10 18975492 18975676 -126613612 - MER5A DNA MER1_type -1 188 11 199 194 81 0 chr10 18976231 18976293 -126612995 - MIR SINE MIR -3 259 193 2065 114 3 13 chr10 18976317 18976615 -126612673 - AluSx SINE Alu -2 310 16 215 322 76 25 chr10 18977038 18977156 -126612132 + L3 LINE CR1 1442 1565 -12 204 111 0 0 chr10 18977491 18977527 -126611761 + (A)n Simple_repeat Simple_repeat 1 36 0 22 0 0 0 chr10 18978185 18978207 -126611081 + AT_rich Low_complexity Low_complexity 1 22 0 458 129 119 0 chr10 18978328 18978429 -126610859 - AluSp SINE Alu -200 113 1 758 200 131 0 chr10 18978430 18978605 -126610683 - L1PB4 LINE L1 -2 6154 5957 1726 198 0 0 chr10 18978781 18979116 -126610172 + AluJo SINE Alu 3 337 0 544 171 0 0 chr10 18979490 18979578 -126609710 - MLT2D LTR ERVL -321 93 6 228 364 10 0 chr10 18979623 18979722 -126609566 - L2 LINE L2 -823 2491 2392 205 377 58 0 chr10 18980624 18980762 -126608526 + L2 LINE L2 2392 2537 -777 587 133 0 0 chr10 18980768 18980858 -126608430 + MLT2D LTR ERVL 6 95 -319 21 0 0 0 chr10 18981155 18981176 -126608112 + AT_rich Low_complexity Low_complexity 1 21 0 1496 179 12 0 chr10 18981689 18981929 -126607359 + AluJo SINE Alu 3 245 -67 2085 121 13 0 chr10 18982603 18982909 -126606379 - AluSx SINE Alu -2 310 1 301 306 0 25 chr10 18982941 18983062 -126606226 - L1ME LINE L1 -305 5816 5699 373 333 44 39 chr10 18983744 18983924 -126605364 - L1ME LINE L1 -456 5665 5485 213 39 0 0 chr10 18985219 18985245 -126604043 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 1399 129 0 0 chr10 18985262 18985455 -126603833 - AluSx SINE Alu -115 197 5 3091 151 14 54 chr10 18986424 18987000 -126602288 - LTR9 LTR ERV1 0 612 60 1620 134 111 4 chr10 18987212 18987474 -126601814 + AluJb SINE Alu 1 290 -22 252 0 0 0 chr10 18987484 18987512 -126601776 + (TAAAA)n Simple_repeat Simple_repeat 3 30 0 2246 105 3 10 chr10 18988245 18988558 -126600730 - AluSq SINE Alu 0 313 3 362 265 103 7 chr10 18989002 18989138 -126600150 - MIR SINE MIR -112 150 2 416 353 48 27 chr10 18989174 18989362 -126599926 + MER5A DNA MER1_type 1 178 0 406 230 105 47 chr10 18989587 18989778 -126599510 + L2 LINE L2 3112 3313 0 2200 106 0 3 chr10 18990400 18990693 -126598595 + AluSq SINE Alu 1 292 -21 2069 166 30 91 chr10 18991044 18991363 -126597925 - MLT1C LTR MaLR 0 467 187 2058 118 38 3 chr10 18991363 18991652 -126597636 - AluSc SINE Alu -10 299 1 2069 166 30 91 chr10 18991652 18991826 -126597462 - MLT1C LTR MaLR -280 187 4 5129 198 67 77 chr10 18991830 18993212 -126596076 - MLT1C-int LTR MaLR -1 1370 2 2208 181 34 55 chr10 18993220 18993691 -126595597 - MLT1C LTR MaLR -6 461 1 2239 95 3 0 chr10 18993714 18993999 -126595289 + AluSg SINE Alu 1 286 -24 933 219 26 63 chr10 18994163 18994433 -126594855 + Charlie4 DNA MER1_type 35 294 -1667 1874 133 0 63 chr10 18994447 18994764 -126594524 - AluJb SINE Alu -15 297 1 467 203 30 79 chr10 18994896 18995098 -126594190 + Charlie4 DNA MER1_type 1754 1945 -16 517 88 0 12 chr10 18995354 18995434 -126593854 + Alu SINE Alu 233 311 0 22 0 0 0 chr10 18995686 18995708 -126593580 + AT_rich Low_complexity Low_complexity 1 22 0 2231 106 0 0 chr10 18996137 18996430 -126592858 - AluSx SINE Alu -19 293 1 299 317 0 10 chr10 18996630 18996731 -126592557 + L1MB4 LINE L1 14 113 -6271 1979 170 14 24 chr10 18996732 18996903 -126592385 - MER47A DNA MER2_type -1957 366 195 3313 171 54 84 chr10 18996903 18997712 -126591576 + LTR1 LTR ERV1 1 785 0 1979 170 14 24 chr10 18997712 18997910 -126591378 - MER47A DNA MER2_type -2128 195 1 355 267 156 44 chr10 18997910 18998135 -126591153 + L1MB4 LINE L1 113 362 -6022 4604 184 45 30 chr10 18998142 19000297 -126588991 + L1MB4 LINE L1 4332 6406 -10 2123 83 31 24 chr10 19001110 19001400 -126587888 - AluY SINE Alu -18 293 2 23 33 0 0 chr10 19001699 19001729 -126587559 + AT_rich Low_complexity Low_complexity 1 30 0 203 295 133 9 chr10 19002345 19002450 -126586838 + MER5B DNA MER1_type 60 177 -1 841 222 6 0 chr10 19003429 19003600 -126585688 - AluJb SINE Alu -8 304 133 2776 75 3 53 chr10 19003818 19004192 -126585096 + THE1A LTR MaLR 1 355 0 317 271 33 66 chr10 19004699 19004821 -126584467 - L2 LINE L2 -5 3267 3150 36 0 0 0 chr10 19005132 19005168 -126584120 + AT_rich Low_complexity Low_complexity 1 36 0 36 97 0 0 chr10 19005217 19005330 -126583958 + AT_rich Low_complexity Low_complexity 1 113 0 1021 122 0 0 chr10 19005545 19005676 -126583612 + FLAM_C SINE Alu 1 131 -2 883 214 0 79 chr10 19006018 19006233 -126583055 + MER63A DNA MER1_type 2 199 -11 194 256 0 23 chr10 19006528 19006571 -126582717 - MIR SINE MIR -29 233 192 1492 166 9 116 chr10 19006676 19006817 -126582471 + AluJo SINE Alu 2 88 -214 2302 80 3 13 chr10 19006817 19007129 -126582159 + AluY SINE Alu 1 309 -2 1492 166 9 116 chr10 19007129 19007324 -126581964 + AluJo SINE Alu 88 302 0 195 341 47 54 chr10 19007371 19007500 -126581788 + L2 LINE L2 3186 3313 0 638 130 0 0 chr10 19007502 19007594 -126581694 + FRAM SINE Alu 16 107 -69 231 88 0 0 chr10 19007616 19007650 -126581638 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 198 327 0 0 chr10 19008045 19008100 -126581188 + L2 LINE L2 2762 2816 -498 482 239 1 11 chr10 19008127 19008243 -126581045 + MIR SINE MIR 38 151 -62 281 174 0 82 chr10 19008243 19008341 -126580947 + AluJ/FLAM SINE Alu 1 90 -212 226 259 28 25 chr10 19008397 19008721 -126580567 + CT-rich Low_complexity Low_complexity 1 325 0 282 249 23 39 chr10 19008733 19008958 -126580330 + CT-rich Low_complexity Low_complexity 1 221 0 24 0 0 0 chr10 19009166 19009190 -126580098 + AT_rich Low_complexity Low_complexity 1 24 0 243 61 0 0 chr10 19009511 19009544 -126579744 + (CA)n Simple_repeat Simple_repeat 2 34 0 1892 122 37 4 chr10 19009734 19010005 -126579283 + AluSx SINE Alu 1 280 -32 206 32 32 0 chr10 19010005 19010036 -126579252 + (CAAA)n Simple_repeat Simple_repeat 4 35 0 509 261 133 18 chr10 19010241 19010467 -126578821 + MIR SINE MIR 10 261 -1 905 218 17 0 chr10 19010592 19010771 -126578517 + L1PA12 LINE L1 5983 6164 -4 2074 148 18 24 chr10 19011751 19012088 -126577200 + MER1B DNA MER1_type 3 337 0 1832 93 4 12 chr10 19012275 19012532 -126576756 - AluSq SINE Alu -14 299 45 218 368 33 41 chr10 19013087 19013202 -126576086 - L2 LINE L2 -460 2854 2740 1058 181 5 11 chr10 19013202 19013390 -126575898 - L1MB3 LINE L1 0 6183 5997 218 368 33 41 chr10 19013390 19013516 -126575772 - L2 LINE L2 -574 2740 2615 759 270 74 25 chr10 19013518 19013885 -126575403 - L2 LINE L2 -839 2475 2091 2501 128 8 0 chr10 19014148 19014501 -126574787 - L1PA16 LINE L1 -9 6157 5802 24 32 0 0 chr10 19014670 19014701 -126574587 + AT_rich Low_complexity Low_complexity 1 31 0 2391 75 0 3 chr10 19014701 19014995 -126574293 - AluY SINE Alu -18 293 1 235 268 36 0 chr10 19016378 19016434 -126572854 - L2 LINE L2 -12 3301 3244 296 268 27 9 chr10 19016919 19017031 -126572257 - L1ME3A LINE L1 -3 6167 6054 32 0 0 0 chr10 19017071 19017103 -126572185 + AT_rich Low_complexity Low_complexity 1 32 0 1643 263 64 45 chr10 19017137 19017651 -126571637 - L1ME3A LINE L1 -153 6017 5487 1993 116 0 17 chr10 19017651 19017952 -126571336 - AluSx SINE Alu -15 297 2 1643 263 64 45 chr10 19017952 19018060 -126571228 - L1ME3A LINE L1 -683 5487 5383 716 281 139 55 chr10 19018061 19018341 -126570947 - L1ME3A LINE L1 -817 5329 5074 1809 180 0 0 chr10 19018341 19018664 -126570624 - AluSx SINE Alu 0 323 1 716 281 139 55 chr10 19018664 19019073 -126570215 - L1ME3A LINE L1 -1072 5074 4581 263 161 18 0 chr10 19019094 19019150 -126570138 + CT-rich Low_complexity Low_complexity 1 57 0 1877 135 7 11 chr10 19019150 19019424 -126569864 - AluSx SINE Alu -39 273 1 635 242 26 0 chr10 19019431 19019584 -126569704 - L1ME3A LINE L1 -1980 4166 4010 1711 184 7 3 chr10 19019592 19019897 -126569391 - AluJo SINE Alu -6 306 1 842 170 7 0 chr10 19020976 19021111 -126568177 + AluJo SINE Alu 1 136 -176 1655 153 0 0 chr10 19021856 19022097 -126567191 - AluSx SINE Alu -71 241 1 214 198 18 63 chr10 19022609 19022720 -126566568 + CT-rich Low_complexity Low_complexity 4 109 0 191 86 57 0 chr10 19023562 19023597 -126565691 - L3 LINE CR1 -173 1404 1368 180 286 20 61 chr10 19023574 19023672 -126565616 - L3b LINE CR1 -193 1390 1297 * 923 252 5 5 chr10 19024040 19024250 -126565038 + MIR SINE MIR 51 260 -2 858 226 62 25 chr10 19024284 19024309 -126564979 - MER33 DNA MER1_type -2333 252 229 2160 131 0 0 chr10 19024309 19024607 -126564681 - AluSx SINE Alu -14 298 1 858 226 62 25 chr10 19024607 19024824 -126564464 - MER33 DNA MER1_type -2356 229 1 1403 164 13 88 chr10 19025083 19025400 -126563888 - AluJb SINE Alu -19 293 1 656 190 22 99 chr10 19025901 19026082 -126563206 + MER63B DNA MER1_type 2 195 -1493 2313 97 0 3 chr10 19026082 19026382 -126562906 - AluSg SINE Alu -11 299 1 656 190 22 99 chr10 19026382 19026404 -126562884 + MER63B DNA MER1_type 195 1035 -27 304 312 50 21 chr10 19026544 19026685 -126562603 - MIR3 SINE MIR -6 202 58 304 169 0 17 chr10 19027152 19027211 -126562077 - L1MC4 LINE L1 -1337 6705 6648 2072 145 0 3 chr10 19027212 19027508 -126561780 - AluJb SINE Alu -17 295 1 577 318 50 5 chr10 19027896 19028109 -126561179 - MIR SINE MIR -6 256 36 1951 103 72 7 chr10 19028187 19028477 -126560811 - AluSx SINE Alu -3 309 1 760 221 53 33 chr10 19028581 19028809 -126560479 - MIR SINE MIR 0 262 38 1819 118 11 0 chr10 19029330 19029593 -126559695 - AluSx SINE Alu -5 307 42 220 309 0 0 chr10 19029639 19029694 -126559594 + L2 LINE L2 3206 3260 -12 1127 288 91 32 chr10 19029763 19030225 -126559063 - LTR16C LTR ERVL -2 489 1 2317 103 7 7 chr10 19030476 19030786 -126558502 + AluSx SINE Alu 1 310 -2 201 363 71 0 chr10 19030979 19031092 -126558196 + L2 LINE L2 3193 3313 0 376 302 223 30 chr10 19031793 19032036 -126557252 - L2 LINE L2 -1 3312 3117 1907 132 35 3 chr10 19032036 19032324 -126556964 + AluSx SINE Alu 1 297 -15 376 302 223 30 chr10 19032324 19032448 -126556840 - L2 LINE L2 -196 3117 2874 1008 214 5 5 chr10 19032551 19032757 -126556531 - MER67C LTR ERV1 0 710 505 405 219 67 9 chr10 19032758 19032863 -126556425 - MER67C LTR ERV1 -374 336 226 240 35 0 0 chr10 19032960 19032989 -126556299 + (TG)n Simple_repeat Simple_repeat 2 30 0 1261 193 11 108 chr10 19033026 19033159 -126556129 - MLT2D LTR ERVL -48 366 222 1994 153 0 6 chr10 19033159 19033472 -126555816 + AluJo SINE Alu 1 311 -1 1261 193 11 108 chr10 19033472 19033700 -126555588 - MLT2D LTR ERVL -192 222 40 803 177 0 0 chr10 19034503 19034627 -126554661 + FLAM_C SINE Alu 2 125 -18 210 71 0 0 chr10 19034867 19034895 -126554393 + (TAA)n Simple_repeat Simple_repeat 3 30 0 256 301 86 11 chr10 19034896 19034989 -126554299 - MIR SINE MIR 0 262 163 22 35 0 0 chr10 19035117 19035146 -126554142 + AT_rich Low_complexity Low_complexity 1 29 0 764 218 0 8 chr10 19035314 19035447 -126553841 + FLAM_A SINE Alu 1 132 -1 2153 107 0 23 chr10 19035564 19035872 -126553416 + AluSx SINE Alu 1 301 -11 200 314 14 0 chr10 19036255 19036325 -126552963 + MIR SINE MIR 96 166 -96 265 279 0 0 chr10 19037545 19037613 -126551675 + MER117 DNA MER1_type 107 174 -23 1900 167 0 3 chr10 19037739 19038050 -126551238 - AluSx SINE Alu -1 311 2 2227 109 3 0 chr10 19039174 19039468 -126549820 + AluSg1 SINE Alu 1 295 -14 203 238 95 76 chr10 19039604 19039709 -126549579 - MIR SINE MIR -90 172 66 2218 105 3 7 chr10 19040004 19040308 -126548980 - AluSx SINE Alu -9 303 1 1978 143 8 37 chr10 19040347 19040724 -126548564 - L1PA16 LINE L1 0 6166 5801 202 268 187 24 chr10 19041451 19041574 -126547714 - MIR SINE MIR -78 184 42 2108 132 7 0 chr10 19041701 19041996 -126547292 - AluSx SINE Alu -15 297 1 512 288 99 44 chr10 19042419 19042784 -126546504 - L1MC4a LINE L1 -1841 5967 5583 182 279 49 0 chr10 19043058 19043119 -126546169 + MIR SINE MIR 84 147 -115 204 125 0 0 chr10 19043696 19043728 -126545560 + (T)n Simple_repeat Simple_repeat 1 32 0 204 250 39 0 chr10 19044164 19044216 -126545072 - L2 LINE L2 -29 3243 3190 189 206 122 10 chr10 19044497 19044580 -126544708 - MIR SINE MIR -99 109 14 979 189 0 17 chr10 19044943 19045123 -126544165 + AluJb SINE Alu 135 311 -1 25 83 0 0 chr10 19045287 19045347 -126543941 + AT_rich Low_complexity Low_complexity 1 60 0 803 138 0 15 chr10 19046114 19046244 -126543044 + FLAM_C SINE Alu 1 128 -5 221 167 48 0 chr10 19046465 19046507 -126542781 + L3b LINE CR1 1290 1333 -250 33 56 0 0 chr10 19047076 19047130 -126542158 + AT_rich Low_complexity Low_complexity 1 54 0 294 29 0 0 chr10 19049366 19049401 -126539887 + (TG)n Simple_repeat Simple_repeat 2 36 0 261 291 53 53 chr10 19049671 19049741 -126539547 + MIR SINE MIR 111 180 -82 1724 166 59 3 chr10 19049741 19050049 -126539239 - AluJb SINE Alu 0 312 1 261 291 53 53 chr10 19050049 19050129 -126539159 + MIR SINE MIR 179 261 -1 210 246 0 18 chr10 19050130 19050187 -126539101 + (TTG)n Simple_repeat Simple_repeat 3 58 0 2140 109 0 7 chr10 19050481 19050788 -126538500 - AluSq SINE Alu 0 305 1 230 305 69 38 chr10 19050824 19050955 -126538333 - L2 LINE L2 -1692 1622 1488 2592 52 0 3 chr10 19051087 19051396 -126537892 + AluY SINE Alu 1 308 -3 2312 96 0 3 chr10 19051685 19051988 -126537300 + AluSx SINE Alu 1 302 -10 274 358 128 0 chr10 19052958 19053106 -126536182 - MIR3 SINE MIR -7 201 35 253 238 0 0 chr10 19053380 19053443 -126535845 - MIR SINE MIR -108 154 92 501 293 30 79 chr10 19053486 19053752 -126535536 + L1MEd LINE L1 369 621 -5498 268 275 24 65 chr10 19053936 19054183 -126535105 - L1MEc LINE L1 -4735 1575 1339 2155 141 0 0 chr10 19054292 19054583 -126534705 - AluSg SINE Alu -18 292 2 439 292 24 76 chr10 19054638 19054926 -126534362 - L1MEc LINE L1 -4928 1191 919 1822 171 0 0 chr10 19055129 19055416 -126533872 - AluSx SINE Alu -25 287 1 395 294 74 74 chr10 19055583 19056067 -126533221 - L1MEc LINE L1 -5561 558 72 1825 162 3 23 chr10 19056067 19056376 -126532912 - AluJb SINE Alu -9 303 1 395 294 74 74 chr10 19056376 19056402 -126532886 - L1MEc LINE L1 -6046 73 48 30 21 0 21 chr10 19056805 19056826 -126532462 + AT_rich Low_complexity Low_complexity 1 21 -26 2137 111 0 10 chr10 19056826 19057115 -126532173 + AluSq SINE Alu 1 286 -27 30 21 0 21 chr10 19057115 19057141 -126532147 + AT_rich Low_complexity Low_complexity 21 47 0 217 233 0 0 chr10 19059608 19059651 -126529637 + CT-rich Low_complexity Low_complexity 2 44 0 2095 135 0 0 chr10 19059799 19060095 -126529193 - AluSx SINE Alu -10 302 7 207 286 50 79 chr10 19060242 19060345 -126528943 - MIR SINE MIR -29 233 134 2264 119 7 0 chr10 19060345 19060647 -126528641 + AluSp SINE Alu 1 304 -9 207 286 50 79 chr10 19060647 19060683 -126528605 - MIR SINE MIR -128 134 98 240 289 72 0 chr10 19061853 19061936 -126527352 - MIR SINE MIR -87 175 87 255 170 0 0 chr10 19062065 19062112 -126527176 + GA-rich Low_complexity Low_complexity 1 47 0 182 253 172 92 chr10 19062648 19062735 -126526553 - MER5B DNA MER1_type -50 128 35 512 211 11 22 chr10 19062861 19063041 -126526247 + CT-rich Low_complexity Low_complexity 1 178 0 846 126 6 33 chr10 19063056 19063238 -126526050 + (TTC)n Simple_repeat Simple_repeat 2 178 0 1411 207 25 22 chr10 19063247 19063522 -126525766 - AluJo SINE Alu -36 276 1 216 191 0 0 chr10 19063844 19063891 -126525397 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 1626 136 56 70 chr10 19063994 19064368 -126524920 - THE1C LTR MaLR 0 375 7 186 360 0 0 chr10 19069248 19069298 -126519990 - MIR SINE MIR -193 69 20 1977 205 42 36 chr10 19069883 19070381 -126518907 - MLT1D LTR MaLR 0 505 5 190 300 80 20 chr10 19070456 19070556 -126518732 - L3 LINE CR1 -146 1431 1326 5159 100 4 4 chr10 19071070 19071839 -126517449 - L1PB1 LINE L1 -1 6150 5382 2269 123 0 0 chr10 19072047 19072348 -126516940 - AluSx SINE Alu -11 301 1 21 0 0 0 chr10 19072497 19072518 -126516770 + AT_rich Low_complexity Low_complexity 1 21 0 187 120 20 20 chr10 19072867 19072917 -126516371 + (TA)n Simple_repeat Simple_repeat 1 50 0 379 160 77 13 chr10 19073024 19073180 -126516108 + (TA)n Simple_repeat Simple_repeat 2 167 0 367 140 0 35 chr10 19073180 19073261 -126516027 - FLAM_A SINE Alu -70 62 10 21 36 0 0 chr10 19073319 19073347 -126515941 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr10 19074077 19074099 -126515189 + AT_rich Low_complexity Low_complexity 1 22 0 1007 169 6 0 chr10 19074464 19074624 -126514664 - FRAM SINE Alu -12 164 4 253 247 0 67 chr10 19074685 19074774 -126514514 + MIR3 SINE MIR 125 207 -1 1957 123 3 30 chr10 19075161 19075463 -126513825 - AluSq SINE Alu -19 294 1 284 297 101 27 chr10 19075909 19076057 -126513231 + MIR SINE MIR 103 261 -1 24 53 0 0 chr10 19076244 19076282 -126513006 + AT_rich Low_complexity Low_complexity 1 38 0 316 253 117 93 chr10 19077146 19077308 -126511980 - MIR SINE MIR -60 202 37 1311 150 137 82 chr10 19077471 19077764 -126511524 - AluJo SINE Alu -3 309 1 297 326 257 17 chr10 19077924 19078332 -126510956 + L3 LINE CR1 1070 1575 -2 1812 180 0 3 chr10 19078934 19079218 -126510070 - AluJo SINE Alu -19 293 11 1611 190 0 7 chr10 19079783 19080067 -126509221 - AluJo SINE Alu -30 282 1 2160 130 38 19 chr10 19080224 19080592 -126508696 - THE1C LTR MaLR 0 375 1 268 318 109 18 chr10 19080702 19080812 -126508476 - MER91A DNA MER1_type 0 196 77 191 111 0 22 chr10 19081611 19081656 -126507632 + (CAT)n Simple_repeat Simple_repeat 2 45 0 182 289 0 0 chr10 19081657 19081702 -126507586 - MIR SINE MIR -6 256 212 525 104 0 0 chr10 19082078 19082155 -126507133 + (TTCC)n Simple_repeat Simple_repeat 4 80 0 201 226 0 0 chr10 19082147 19082200 -126507088 + C-rich Low_complexity Low_complexity 6 58 0 * 1992 111 4 0 chr10 19082233 19082495 -126506793 - AluSq SINE Alu -46 267 5 414 195 0 0 chr10 19082872 19082954 -126506334 + MER41B LTR ERV1 468 549 -86 1647 65 0 9 chr10 19082971 19083225 -126506063 + AluY SINE Alu 67 318 0 2143 118 3 10 chr10 19083596 19083900 -126505388 - AluSg SINE Alu -7 303 2 2141 248 20 11 chr10 19084347 19084981 -126504307 - L1MCa LINE L1 -3276 3150 2511 5019 217 92 75 chr10 19084987 19085225 -126504063 - L1MCa LINE L1 -3951 2475 2243 800 159 0 36 chr10 19085225 19085363 -126503925 - FLAM_C SINE Alu 0 133 1 5019 217 92 75 chr10 19085363 19086556 -126502732 - L1MCa LINE L1 -4183 2243 984 3580 128 2 24 chr10 19086556 19086929 -126502359 + MER1A DNA MER1_type 1 361 -2339 2288 64 0 0 chr10 19086929 19087261 -126502027 - AluY SINE Alu 0 334 3 3580 128 2 24 chr10 19087261 19087425 -126501863 + MER1A DNA MER1_type 361 527 0 5019 217 92 75 chr10 19087425 19088425 -126500863 - L1MCa LINE L1 -5442 984 2 2356 87 0 3 chr10 19088527 19088826 -126500462 + AluSc SINE Alu 1 298 -11 273 119 0 0 chr10 19088935 19088977 -126500311 + (TTCC)n Simple_repeat Simple_repeat 1 42 0 1846 158 0 4 chr10 19088977 19089256 -126500032 - AluJo SINE Alu -34 278 1 759 127 67 40 chr10 19090168 19090190 -126499098 - L1PA8 LINE L1 0 6172 6152 2354 110 3 0 chr10 19090190 19090500 -126498788 - AluSx SINE Alu -1 311 1 204 40 0 0 chr10 19090504 19090529 -126498759 + (TTTTA)n Simple_repeat Simple_repeat 1 25 0 759 127 67 40 chr10 19090529 19090651 -126498637 - L1PA8 LINE L1 -22 6150 6019 1486 167 3 123 chr10 19090692 19091057 -126498231 + AluJb SINE Alu 1 324 0 1606 124 295 3 chr10 19091523 19091869 -126497419 - MER66A LTR ERV1 -5 473 27 722 184 0 0 chr10 19092452 19092566 -126496722 + FLAM_C SINE Alu 3 116 -27 276 100 0 0 chr10 19092566 19092606 -126496682 + (TAAAA)n Simple_repeat Simple_repeat 1 40 0 1294 210 59 16 chr10 19092731 19093036 -126496252 - MER58B DNA MER1_type -22 319 2 194 279 15 59 chr10 19094142 19094210 -126495078 - L2 LINE L2 -20 3293 3229 2246 91 10 3 chr10 19095619 19095928 -126493360 + AluSq SINE Alu 1 311 -2 29 60 0 0 chr10 19096193 19096243 -126493045 + AT_rich Low_complexity Low_complexity 1 50 0 2293 95 0 0 chr10 19097210 19097506 -126491782 + AluSq SINE Alu 1 296 -17 21 36 0 0 chr10 19098023 19098051 -126491237 + AT_rich Low_complexity Low_complexity 1 28 0 516 61 0 0 chr10 19098606 19098672 -126490616 + U4 snRNA snRNA 1 66 -79 1518 217 18 39 chr10 19098676 19099188 -126490100 - L1M4c LINE L1 -3643 3001 2556 2195 141 0 0 chr10 19099188 19099500 -126489788 - AluSx SINE Alu 0 312 1 1518 217 18 39 chr10 19099500 19099577 -126489711 - L1M4c LINE L1 -4088 2556 2479 1262 127 0 0 chr10 19099607 19099773 -126489515 + AluSg/x SINE Alu 130 295 -17 825 281 103 20 chr10 19099817 19100386 -126488902 - L1M4c LINE L1 -4406 2419 1675 3183 246 15 36 chr10 19100401 19101264 -126488024 - L1M4c LINE L1 -5697 845 1 685 277 66 16 chr10 19101544 19101786 -126487502 + MIR SINE MIR 9 262 0 1528 108 0 19 chr10 19104077 19104291 -126484997 - AluSc SINE Alu -8 301 92 2225 113 3 0 chr10 19104363 19104674 -126484614 - AluSx SINE Alu 0 312 1 206 136 23 0 chr10 19104892 19104936 -126484352 + (TAGA)n Simple_repeat Simple_repeat 2 46 0 24 0 0 0 chr10 19105080 19105104 -126484184 + AT_rich Low_complexity Low_complexity 1 24 0 239 218 23 35 chr10 19105644 19105731 -126483557 + T-rich Low_complexity Low_complexity 1 86 0 2261 113 33 33 chr10 19107335 19107699 -126481589 - THE1B LTR MaLR 0 364 1 2413 97 0 0 chr10 19108005 19108316 -126480972 + AluSq SINE Alu 1 311 -2 207 0 0 0 chr10 19108519 19108542 -126480746 + (CTAG)n Simple_repeat Simple_repeat 2 24 0 273 274 87 58 chr10 19109150 19109358 -126479930 - L2 LINE L2 0 3313 3100 698 214 127 0 chr10 19109376 19109441 -126479847 - MER69 DNA AcHobo 0 2526 2471 1798 157 3 29 chr10 19109441 19109754 -126479534 + AluJo SINE Alu 1 305 -7 698 214 127 0 chr10 19109754 19109899 -126479389 - MER69 DNA AcHobo -55 2471 2288 451 127 0 0 chr10 19109899 19109970 -126479318 - MLT1B LTR MaLR -2 388 318 404 272 11 43 chr10 19110003 19110187 -126479101 + (TATG)n Simple_repeat Simple_repeat 3 180 0 322 273 16 49 chr10 19110213 19110396 -126478892 + (TATATG)n Simple_repeat Simple_repeat 2 178 0 268 208 13 52 chr10 19110431 19110585 -126478703 + (TATG)n Simple_repeat Simple_repeat 2 149 0 299 257 28 28 chr10 19110587 19110696 -126478592 + (TATATG)n Simple_repeat Simple_repeat 4 112 0 226 194 14 69 chr10 19110710 19110854 -126478434 + (TATG)n Simple_repeat Simple_repeat 2 137 0 1480 198 92 9 chr10 19110863 19111201 -126478087 - MLT2D LTR ERVL -48 366 1 1297 220 83 94 chr10 19111201 19111996 -126477292 - MER69 DNA AcHobo -283 2243 1458 479 299 11 75 chr10 19112130 19112173 -126477115 - MER69 DNA AcHobo -593 633 589 1731 89 8 8 chr10 19112173 19112409 -126476879 - AluSq SINE Alu -2 311 76 479 299 11 75 chr10 19112409 19112646 -126476642 - MER69 DNA AcHobo -637 589 371 437 253 67 41 chr10 19112662 19112715 -126476573 + MLT2C1 LTR ERVL 17 213 -182 597 194 7 29 chr10 19112715 19112854 -126476434 + MLT1E3 LTR MaLR 87 222 -402 204 40 0 0 chr10 19112933 19112958 -126476330 + (TCCCC)n Simple_repeat Simple_repeat 1 25 0 184 137 39 20 chr10 19112958 19113009 -126476279 + CT-rich Low_complexity Low_complexity 3 54 0 1725 203 0 3 chr10 19113015 19113325 -126475963 - AluJo SINE Alu -3 309 1 225 0 0 0 chr10 19113547 19113572 -126475716 + (TA)n Simple_repeat Simple_repeat 1 25 0 2342 84 0 3 chr10 19113572 19113868 -126475420 - AluSq SINE Alu -18 295 1 1139 165 57 70 chr10 19113888 19114204 -126475084 - MER69 DNA AcHobo -2206 320 9 2147 105 96 0 chr10 19114626 19114958 -126474330 + THE1B LTR MaLR 1 364 0 2938 172 25 73 chr10 19115324 19116050 -126473238 + LTR8 LTR ERV1 1 691 0 239 128 149 0 chr10 19116050 19116097 -126473191 + MER5B DNA MER1_type 79 132 -46 690 210 118 105 chr10 19116162 19116552 -126472736 + MSTD LTR MaLR 2 396 0 334 225 0 25 chr10 19116842 19116922 -126472366 + MSTC LTR MaLR 19 96 -332 21 0 0 0 chr10 19117034 19117055 -126472233 + AT_rich Low_complexity Low_complexity 1 21 0 500 290 16 32 chr10 19117609 19117795 -126471493 - MER5A DNA MER1_type 0 189 7 2761 143 33 22 chr10 19118276 19118767 -126470521 + MER41E LTR ERV1 17 512 0 225 0 0 0 chr10 19119371 19119396 -126469892 + (A)n Simple_repeat Simple_repeat 1 25 0 1135 296 183 22 chr10 19121731 19122664 -126466624 + L2 LINE L2 2207 3303 -10 325 264 72 83 chr10 19122745 19122938 -126466350 - L2 LINE L2 -1257 2057 1867 273 283 66 19 chr10 19123155 19123261 -126466027 + MER5B DNA MER1_type 68 178 0 3383 170 29 31 chr10 19123475 19123816 -126465472 - L1MB3 LINE L1 -6 6177 5837 2039 101 74 20 chr10 19123816 19124113 -126465175 - AluSp SINE Alu 0 313 1 3383 170 29 31 chr10 19124113 19124540 -126464748 - L1MB3 LINE L1 -346 5837 5411 2464 86 0 0 chr10 19124697 19124998 -126464290 + AluSc SINE Alu 1 301 -8 2706 149 65 19 chr10 19125118 19125165 -126464123 + LTR49 LTR ERV1 1 44 -551 569 100 0 0 chr10 19125165 19125245 -126464043 - MADE1 DNA Mariner 0 80 1 2706 149 65 19 chr10 19125245 19125715 -126463573 + LTR49 LTR ERV1 44 549 -46 207 0 0 0 chr10 19125715 19125738 -126463550 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2706 149 65 19 chr10 19125738 19125788 -126463500 + LTR49 LTR ERV1 549 595 0 383 302 129 5 chr10 19126004 19126206 -126463082 - MIR SINE MIR -30 232 6 1939 101 22 53 chr10 19126395 19126713 -126462575 - AluSg SINE Alu -2 308 1 1991 146 10 3 chr10 19126766 19127068 -126462220 - AluSx SINE Alu -8 304 1 1961 184 35 79 chr10 19127349 19127831 -126461457 + MLT2B1 LTR ERVL 1 458 -62 2033 148 0 0 chr10 19127831 19128134 -126461154 + AluSx SINE Alu 1 303 -9 1961 184 35 79 chr10 19128134 19128195 -126461093 + MLT2B1 LTR ERVL 458 520 0 279 269 157 19 chr10 19128855 19128963 -126460325 + L2 LINE L2 3100 3222 -50 601 233 89 35 chr10 19129035 19129079 -126460209 - MIR SINE MIR -19 243 203 2068 128 7 0 chr10 19129079 19129376 -126459912 - AluSx SINE Alu -13 299 1 601 233 89 35 chr10 19129376 19129533 -126459755 - MIR SINE MIR -59 203 31 333 274 26 13 chr10 19129997 19130150 -126459138 + (TA)n Simple_repeat Simple_repeat 2 156 0 1664 189 4 4 chr10 19130251 19130532 -126458756 - AluJo SINE Alu -31 281 1 2659 26 0 3 chr10 19130802 19131106 -126458182 + AluY SINE Alu 1 303 -8 357 208 239 31 chr10 19131109 19131268 -126458020 - HAL1 LINE L1 -296 2211 2020 997 231 224 12 chr10 19131398 19131884 -126457404 - HAL1 LINE L1 -928 1579 991 285 322 55 27 chr10 19132011 19132157 -126457131 - HAL1 LINE L1 -2011 496 347 281 237 237 35 chr10 19132158 19132272 -126457016 - MER63A DNA MER1_type -1 209 73 438 265 129 56 chr10 19132358 19132645 -126456643 - HAL1 LINE L1 -2152 355 48 381 266 171 19 chr10 19132831 19133014 -126456274 - MIR SINE MIR -16 246 40 1708 106 101 53 chr10 19133362 19133720 -126455568 - THE1C LTR MaLR 0 375 1 1252 191 15 53 chr10 19133811 19134267 -126455021 + MLT2B1 LTR ERVL 1 520 0 258 278 69 0 chr10 19134303 19134375 -126454913 - MER91C DNA MER1_type -30 110 34 437 314 19 19 chr10 19134826 19134985 -126454303 - L2 LINE L2 0 3313 3155 236 321 212 52 chr10 19136665 19137033 -126452255 - L2 LINE L2 -18 3254 2828 192 222 0 0 chr10 19137152 19137188 -126452100 - MIR SINE MIR -61 147 112 234 0 0 0 chr10 19137251 19137277 -126452011 + (A)n Simple_repeat Simple_repeat 1 26 0 1726 191 91 0 chr10 19137726 19138087 -126451201 + MSTD LTR MaLR 3 396 0 311 247 187 13 chr10 19138091 19138241 -126451047 - L1ME4a LINE L1 0 6121 5946 613 203 94 22 chr10 19138982 19139120 -126450168 + MLT1E LTR MaLR 22 169 -424 * 1198 206 26 9 chr10 19139117 19139345 -126449943 + MLT1E LTR MaLR 362 593 0 2266 120 0 3 chr10 19139727 19140036 -126449252 + AluSq SINE Alu 1 308 -5 22 0 0 0 chr10 19140239 19140261 -126449027 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr10 19140351 19140379 -126448909 + AT_rich Low_complexity Low_complexity 1 28 0 12094 99 9 3 chr10 19140469 19142182 -126447106 - L1P LINE L1 -1171 4975 3252 7039 108 19 1 chr10 19142180 19143221 -126446067 + L1P LINE L1 2196 3255 -2891 * 22 0 0 0 chr10 19143227 19143249 -126446039 + AT_rich Low_complexity Low_complexity 1 22 0 198 284 123 12 chr10 19143415 19143496 -126445792 + MIR3 SINE MIR 8 97 -111 5108 148 47 16 chr10 19143937 19144810 -126444478 + MER49 LTR ERV1 15 914 -9 1648 112 0 9 chr10 19144936 19145160 -126444128 + AluSp SINE Alu 79 300 -13 2138 110 0 23 chr10 19145455 19145755 -126443533 + AluSx SINE Alu 1 293 -19 5324 84 132 0 chr10 19145805 19146535 -126442753 - LTR12 LTR ERV1 0 826 1 755 185 44 54 chr10 19146710 19146915 -126442373 - pTR5 LTR ERV1 -1493 945 743 2341 106 0 3 chr10 19148287 19148598 -126440690 - AluSg SINE Alu 0 310 1 296 271 163 23 chr10 19149931 19150060 -126439228 - MER5B DNA MER1_type -1 177 31 2190 112 0 7 chr10 19150061 19150365 -126438923 - AluSg SINE Alu -8 302 1 28 0 0 0 chr10 19150734 19150762 -126438526 + AT_rich Low_complexity Low_complexity 1 28 0 200 265 60 12 chr10 19151809 19151892 -126437396 + MIR SINE MIR 117 203 -59 229 254 0 34 chr10 19152482 19152541 -126436747 - MER5B DNA MER1_type -121 57 1 232 246 46 0 chr10 19154438 19154503 -126434785 + MIR SINE MIR 64 131 -131 21 57 0 0 chr10 19154638 19154673 -126434615 + AT_rich Low_complexity Low_complexity 1 35 0 1800 220 17 98 chr10 19155669 19156259 -126433029 - MER34 LTR ERV1 0 542 1 457 287 138 35 chr10 19156314 19156514 -126432774 - L2 LINE L2 -6 3307 3068 1245 193 49 58 chr10 19156514 19156840 -126432448 + MER33 DNA MER1_type 2 324 0 457 287 138 35 chr10 19156840 19156921 -126432367 - L2 LINE L2 -245 3068 2997 1796 178 0 31 chr10 19158684 19159004 -126430284 + AluJo SINE Alu 1 310 -2 186 353 92 29 chr10 19159940 19160113 -126429175 + L2 LINE L2 458 641 -2673 265 139 70 0 chr10 19160311 19160354 -126428934 + L2 LINE L2 3213 3258 -14 2376 96 0 0 chr10 19160735 19161036 -126428252 + AluSq SINE Alu 1 301 -12 1664 197 3 3 chr10 19162115 19162419 -126426869 - AluJo SINE Alu -6 306 3 1176 213 145 61 chr10 19162445 19162498 -126426790 - L1MC5 LINE L1 -284 7677 7630 2241 97 0 13 chr10 19162498 19162796 -126426492 + AluSx SINE Alu 1 294 -18 1176 213 145 61 chr10 19162796 19163334 -126425954 - L1MC5 LINE L1 -331 7630 7036 2400 57 0 13 chr10 19163412 19163711 -126425577 + AluY SINE Alu 1 295 -16 31 0 0 0 chr10 19163711 19163742 -126425546 + AT_rich Low_complexity Low_complexity 1 31 0 371 323 45 18 chr10 19163940 19164160 -126425128 - L1M4 LINE L1 -1886 4260 4035 644 224 31 85 chr10 19164195 19164454 -126424834 - L1M4 LINE L1 -4576 2249 2005 19964 153 39 20 chr10 19164465 19166483 -126422805 - L1MA2 LINE L1 -4 7719 5741 369 0 0 0 chr10 19166483 19166524 -126422764 + (TG)n Simple_repeat Simple_repeat 2 42 0 19964 153 39 20 chr10 19166524 19172062 -126417226 - L1MA2 LINE L1 -1982 5741 16 1612 240 42 71 chr10 19172064 19172225 -126417063 - L1M4 LINE L1 -4779 1867 1703 1958 127 0 27 chr10 19172225 19172524 -126416764 - AluSx SINE Alu -15 297 7 1612 240 42 71 chr10 19172524 19173136 -126416152 - L1M4 LINE L1 -4943 1703 1107 198 355 37 37 chr10 19174140 19174247 -126415041 - L2 LINE L2 -8 3264 3158 726 224 19 6 chr10 19174698 19174854 -126414434 + MER5A DNA MER1_type 32 189 0 1324 186 17 0 chr10 19177359 19177590 -126411698 - MIR SINE MIR -25 237 3 1937 64 113 39 chr10 19178714 19178997 -126410291 + AluY SINE Alu 1 304 -7 1783 173 14 0 chr10 19179008 19179297 -126409991 + AluJo SINE Alu 1 293 -19 2240 99 0 0 chr10 19179301 19179603 -126409685 + AluSg SINE Alu 1 302 0 761 168 74 0 chr10 19180496 19180645 -126408643 - L1MB2 LINE L1 -18 6153 5994 2094 130 10 0 chr10 19180861 19181161 -126408127 + AluSx SINE Alu 1 303 -9 29 78 0 0 chr10 19181585 19181649 -126407639 + AT_rich Low_complexity Low_complexity 1 64 0 1623 155 125 39 chr10 19182127 19182463 -126406825 - MLT1A1 LTR MaLR 0 365 1 1609 215 7 0 chr10 19182523 19182825 -126406463 + AluJo SINE Alu 1 304 -8 1677 163 0 23 chr10 19182848 19183148 -126406140 + AluJo SINE Alu 5 297 -15 910 150 0 0 chr10 19183690 19183830 -126405458 + AluJb SINE Alu 1 140 -172 2032 122 0 0 chr10 19183843 19184113 -126405175 + AluSx SINE Alu 20 289 -23 1526 171 25 22 chr10 19184113 19184388 -126404900 + MSTB LTR MaLR 147 422 -4 585 285 140 12 chr10 19184397 19184804 -126404484 + LTR33 LTR ERVL 45 503 -18 2233 80 28 0 chr10 19185434 19185721 -126403567 + AluSx SINE Alu 1 295 -17 278 271 8 0 chr10 19186073 19186191 -126403097 + (TA)n Simple_repeat Simple_repeat 2 120 0 26 0 0 0 chr10 19186545 19186571 -126402717 + AT_rich Low_complexity Low_complexity 1 26 0 2438 93 0 0 chr10 19187605 19187917 -126401371 + AluSx SINE Alu 1 312 0 22 80 0 0 chr10 19188721 19188771 -126400517 + AT_rich Low_complexity Low_complexity 1 50 0 452 316 75 5 chr10 19192303 19192490 -126396798 - MIR SINE MIR -3 259 60 2403 42 0 78 chr10 19192516 19192850 -126396438 + AluY SINE Alu 4 311 0 243 154 39 0 chr10 19192893 19192945 -126396343 + (TTCA)n Simple_repeat Simple_repeat 1 54 0 205 233 0 0 chr10 19193107 19193150 -126396138 - MIR SINE MIR -37 225 183 865 125 0 0 chr10 19193804 19193924 -126395364 - AluSg/x SINE Alu -18 294 175 2112 116 13 7 chr10 19194814 19195115 -126394173 + AluSx SINE Alu 1 303 -9 1193 194 184 3 chr10 19195784 19196093 -126393195 - MLT1A1 LTR MaLR 0 365 1 2227 116 3 0 chr10 19197029 19197340 -126391948 + AluSx SINE Alu 1 312 0 2452 99 5 27 chr10 19197477 19197879 -126391409 - L1MA2 LINE L1 0 6304 5912 22 0 0 0 chr10 19200027 19200049 -126389239 + AT_rich Low_complexity Low_complexity 1 22 0 3492 97 57 0 chr10 19200510 19201017 -126388271 + L1PA10 LINE L1 5617 6152 -16 315 304 22 22 chr10 19202250 19202385 -126386903 - LTR16C LTR ERVL 0 491 357 3912 103 4 2 chr10 19203237 19203790 -126385498 - MER41A LTR ERV1 0 554 1 3301 98 16 18 chr10 19203928 19204418 -126384870 + MER1A DNA MER1_type 40 528 -1 30 69 0 0 chr10 19204812 19204870 -126384418 + AT_rich Low_complexity Low_complexity 1 58 0 1212 111 60 18 chr10 19206574 19206791 -126382497 + Tigger2a DNA MER2_type 1 226 -208 195 42 0 0 chr10 19206867 19206891 -126382397 + (TTCC)n Simple_repeat Simple_repeat 1 24 0 2035 139 3 0 chr10 19206891 19207179 -126382109 - AluSx SINE Alu -19 293 5 1337 134 45 0 chr10 19207180 19207404 -126381884 + Tigger2a DNA MER2_type 191 424 -10 2306 87 3 3 chr10 19208381 19208680 -126380608 + AluSc SINE Alu 1 299 -10 30 45 0 0 chr10 19208890 19208934 -126380354 + AT_rich Low_complexity Low_complexity 1 44 0 2755 211 35 13 chr10 19209049 19209141 -126380147 - L1 LINE L1 -1105 5041 4952 1672 186 3 14 chr10 19209141 19209465 -126379823 - AluJo SINE Alu 0 321 1 2755 211 35 13 chr10 19209465 19210124 -126379164 - L1 LINE L1 -1194 4952 4273 25 0 0 0 chr10 19211426 19211451 -126377837 + AT_rich Low_complexity Low_complexity 1 25 0 365 194 65 0 chr10 19211586 19211679 -126377609 + Charlie5 DNA MER1_type 1 99 -2513 5031 176 32 13 chr10 19211679 19212830 -126376458 - L1MC1 LINE L1 -11 7760 6589 571 114 23 0 chr10 19212830 19212918 -126376370 + LTR23 LTR ERV1 320 409 -28 7930 264 34 31 chr10 19212928 19213109 -126376179 - L1MC1 LINE L1 -985 6599 6420 2001 91 0 0 chr10 19213109 19213352 -126375936 - AluSg SINE Alu -18 292 50 7930 264 34 31 chr10 19213352 19215778 -126373510 - L1MC1 LINE L1 -1164 6420 4002 5060 150 8 0 chr10 19215778 19217115 -126372173 - L1PA15 LINE L1 0 6165 4799 7930 264 34 31 chr10 19217115 19220464 -126368824 - L1MC1 LINE L1 -3582 4002 7 6706 187 69 13 chr10 19220473 19221027 -126368261 - L1MCa LINE L1 -3572 2854 2333 4883 40 0 2 chr10 19221027 19221623 -126367665 - L1PA4 LINE L1 0 6155 5561 6706 187 69 13 chr10 19221623 19223597 -126365691 - L1MCa LINE L1 -4093 2333 58 2159 112 0 0 chr10 19224508 19224810 -126364478 - AluSx SINE Alu 0 306 5 1080 75 8 0 chr10 19224832 19224965 -126364323 - AluSc SINE Alu -175 134 1 24 53 0 0 chr10 19225585 19225623 -126363665 + AT_rich Low_complexity Low_complexity 1 38 0 2057 75 90 7 chr10 19226054 19226333 -126362955 - AluY SINE Alu -9 302 1 1239 13 0 20 chr10 19226391 19226583 -126362705 - L1PA2 LINE L1 0 6155 6008 917 161 16 31 chr10 19226717 19226909 -126362379 - MLT1D LTR MaLR 0 505 317 2313 116 0 6 chr10 19227044 19227355 -126361933 + AluSx SINE Alu 1 309 -3 2151 123 7 3 chr10 19227497 19227805 -126361483 + AluSc SINE Alu 1 309 0 1977 95 8 11 chr10 19228148 19228442 -126360846 + AluSq SINE Alu 24 316 0 192 77 0 0 chr10 19228972 19228998 -126360290 + (GGA)n Simple_repeat Simple_repeat 2 27 0 1762 201 7 0 chr10 19229202 19229496 -126359792 + AluJo SINE Alu 1 296 -16 2250 120 3 0 chr10 19230244 19230543 -126358745 + AluSq SINE Alu 1 300 -13 684 250 26 16 chr10 19230613 19230805 -126358483 + MER20 DNA MER1_type 2 195 -24 1519 133 0 5 chr10 19231054 19231264 -126358024 + AluSg/x SINE Alu 86 294 -18 213 39 0 0 chr10 19231267 19231293 -126357995 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 402 74 0 0 chr10 19231292 19231346 -126357942 + (CA)n Simple_repeat Simple_repeat 2 55 0 1011 161 0 0 chr10 19231360 19231540 -126357748 + (TA)n Simple_repeat Simple_repeat 1 180 0 321 315 0 0 chr10 19231550 19231639 -126357649 - L1MC4 LINE L1 -1340 6702 6614 * 329 311 0 0 chr10 19231591 19231681 -126357607 + L1MC4 LINE L1 6614 6703 -1339 1534 163 76 14 chr10 19231951 19232240 -126357048 + AluJo SINE Alu 1 307 -5 504 267 41 72 chr10 19233793 19233860 -126355428 - MER5A DNA MER1_type 0 189 121 1775 173 0 26 chr10 19233860 19234166 -126355122 + AluJo SINE Alu 1 298 -14 504 267 41 72 chr10 19234166 19234293 -126354995 - MER5A DNA MER1_type -68 121 1 574 302 104 5 chr10 19235839 19236061 -126353227 + MIR SINE MIR 13 256 -6 183 333 48 0 chr10 19236767 19236830 -126352458 - MIR3 SINE MIR -4 204 139 637 232 52 57 chr10 19236842 19237053 -126352235 - MIR SINE MIR -2 260 51 195 354 80 9 chr10 19237063 19237176 -126352112 - MIR SINE MIR -58 150 30 274 306 20 20 chr10 19237389 19237487 -126351801 + MIR3 SINE MIR 78 175 -33 1599 206 63 25 chr10 19237618 19238060 -126351228 + MLT1C LTR MaLR 6 464 -3 2274 110 10 0 chr10 19238065 19238374 -126350914 - AluSx SINE Alu 0 312 1 181 315 46 54 chr10 19238492 19238622 -126350666 + L3 LINE CR1 598 726 -851 302 286 94 36 chr10 19238984 19239208 -126350080 + L1ME4a LINE L1 5816 6052 -69 21 0 0 0 chr10 19239278 19239299 -126349989 + AT_rich Low_complexity Low_complexity 1 21 0 4538 218 113 61 chr10 19239399 19240394 -126348894 + L1MCa LINE L1 21 963 -5463 1714 186 0 0 chr10 19240394 19240668 -126348620 + AluJb SINE Alu 1 274 -38 255 203 0 0 chr10 19240668 19240737 -126348551 + GA-rich Low_complexity Low_complexity 2 70 0 200 119 0 24 chr10 19240737 19240779 -126348509 + (GGGA)n Simple_repeat Simple_repeat 4 44 0 4538 218 113 61 chr10 19240779 19242090 -126347198 + L1MCa LINE L1 962 2544 -3882 728 188 0 16 chr10 19242111 19242239 -126347049 + AluJ SINE Alu 1 126 -186 2412 172 69 6 chr10 19242278 19242785 -126346503 + L1MB3 LINE L1 5631 6169 -14 5762 234 60 27 chr10 19242793 19244731 -126344557 + L1MCa LINE L1 2553 4555 -1871 812 172 57 62 chr10 19244846 19245038 -126344250 + AluJ SINE Alu 120 310 -2 189 283 98 11 chr10 19245173 19245265 -126344023 - MIR SINE MIR -13 249 150 216 328 0 0 chr10 19246339 19246406 -126342882 - MIR SINE MIR -12 250 184 359 253 136 0 chr10 19246566 19246734 -126342554 + MIR SINE MIR 47 248 -14 309 208 52 62 chr10 19246838 19246934 -126342354 - MIR SINE MIR 0 262 168 942 205 35 0 chr10 19246979 19247177 -126342111 + MER7C DNA MER2_type 1 205 -397 1486 150 34 116 chr10 19247177 19247462 -126341826 - MER4A LTR ERV1 0 664 426 3306 66 0 0 chr10 19247462 19247887 -126341401 - L1PA5 LINE L1 0 6154 5730 1486 150 34 116 chr10 19247887 19248041 -126341247 - MER4A LTR ERV1 -238 426 261 608 121 0 10 chr10 19248041 19248140 -126341148 - MER4A LTR ERV1 -566 98 1 1906 144 5 95 chr10 19248141 19248300 -126340988 + MER7C DNA MER2_type 203 375 -2653 1715 103 21 0 chr10 19248300 19248534 -126340754 + AluSg SINE Alu 59 297 -13 1906 144 5 95 chr10 19248534 19248804 -126340484 + MER7C DNA MER2_type 375 593 -9 324 260 39 10 chr10 19248921 19249025 -126340263 - MIR SINE MIR -138 124 18 2298 99 0 3 chr10 19250276 19250580 -126338708 + AluSg SINE Alu 1 303 -7 1014 174 122 4 chr10 19250591 19250861 -126338427 + L1MA4 LINE L1 5991 6292 -8 24 32 0 0 chr10 19250862 19250893 -126338395 + AT_rich Low_complexity Low_complexity 1 31 0 2236 109 0 0 chr10 19251160 19251462 -126337826 + AluSx SINE Alu 1 302 -10 2313 206 42 34 chr10 19251780 19252426 -126336862 - L1MB4 LINE L1 -213 5967 5317 5498 189 11 34 chr10 19252432 19253420 -126335868 - L1MC1 LINE L1 -7 6606 5664 1217 176 30 21 chr10 19253420 19253653 -126335635 - MER46A DNA MER2_type 0 236 2 5498 189 11 34 chr10 19253653 19254247 -126335041 - L1MC1 LINE L1 -949 5664 5058 806 189 0 0 chr10 19254255 19254408 -126334880 + MER46A DNA MER2_type 26 178 -58 4969 242 50 28 chr10 19254409 19254560 -126334728 - L1MC1 LINE L1 -1828 4598 4452 186 43 0 0 chr10 19254560 19254583 -126334705 + (TTTTC)n Simple_repeat Simple_repeat 4 26 0 4969 242 50 28 chr10 19254583 19256210 -126333078 - L1MC1 LINE L1 -1974 4452 2781 2648 169 87 82 chr10 19256239 19256972 -126332316 - L1MC1 LINE L1 -5639 787 51 698 210 55 55 chr10 19256987 19257278 -126332010 - L1MB4 LINE L1 -810 5336 5046 289 287 147 21 chr10 19257312 19257455 -126331833 - MIR SINE MIR -50 212 52 1927 239 43 9 chr10 19257456 19257996 -126331292 + MER99 DNA DNA 2 559 -269 500 229 136 7 chr10 19257983 19258123 -126331165 + MER99 DNA DNA 668 825 -3 * 1070 197 9 21 chr10 19258289 19258522 -126330766 - MLT1D LTR MaLR 0 505 276 1013 198 18 123 chr10 19258538 19258938 -126330350 - MLT1A1 LTR MaLR -5 360 3 3662 179 89 4 chr10 19258938 19259699 -126329589 + LTR1B LTR ERV1 1 826 0 870 227 72 19 chr10 19259705 19259969 -126329319 - MLT1D LTR MaLR -225 280 3 1992 111 9 63 chr10 19260504 19260820 -126328468 + AluSq SINE Alu 1 299 -14 373 290 87 25 chr10 19261170 19261742 -126327546 - L1ME LINE L1 -508 5654 5043 247 349 23 14 chr10 19261748 19261963 -126327325 - L1ME LINE L1 -1134 5012 4796 635 242 8 0 chr10 19262068 19262196 -126327092 - FLAM_A SINE Alu -4 129 1 402 158 53 83 chr10 19262298 19262340 -126326948 - L1ME3A LINE L1 -18 6152 6110 2186 92 0 4 chr10 19262340 19262646 -126326642 + AluSg SINE Alu 1 305 0 402 158 53 83 chr10 19262646 19262735 -126326553 - L1ME3A LINE L1 -60 6110 6024 1833 181 0 0 chr10 19263283 19263582 -126325706 - AluJo SINE Alu -12 300 2 2616 62 0 0 chr10 19263813 19264118 -126325170 + AluY SINE Alu 1 305 -6 272 291 94 55 chr10 19264127 19264254 -126325034 + MIR3 SINE MIR 41 172 -36 220 233 108 50 chr10 19264262 19264317 -126324971 + MIR SINE MIR 132 182 -80 1842 158 44 116 chr10 19264317 19264861 -126324427 + MLT1D LTR MaLR 1 505 0 220 233 108 50 chr10 19264861 19264925 -126324363 + MIR SINE MIR 182 258 -4 234 0 0 0 chr10 19265165 19265191 -126324097 + (TATG)n Simple_repeat Simple_repeat 2 27 0 454 363 39 37 chr10 19265263 19265671 -126323617 + L2 LINE L2 2565 2973 -341 782 233 37 0 chr10 19265935 19266124 -126323164 - MER3 DNA MER1_type -13 196 1 2090 98 26 36 chr10 19266356 19266661 -126322627 - AluSc SINE Alu -7 302 1 295 194 16 0 chr10 19266718 19266780 -126322508 + LTR37A LTR ERV1 116 178 -248 608 231 62 8 chr10 19266809 19267051 -126322237 + LTR37B LTR ERV1 210 464 -4 2214 107 0 10 chr10 19267086 19267384 -126321904 + AluSg1 SINE Alu 1 295 -14 279 26 0 0 chr10 19267699 19267738 -126321550 + LTR37B LTR ERV1 426 464 -4 1648 164 0 74 chr10 19267739 19268063 -126321225 + AluJo SINE Alu 1 300 -12 28 48 0 0 chr10 19268490 19268532 -126320756 + AT_rich Low_complexity Low_complexity 1 42 0 740 258 104 73 chr10 19268548 19268785 -126320503 - MER34 LTR ERV1 -19 523 295 1440 109 45 9 chr10 19268785 19269006 -126320282 + MER30 DNA MER1_type 2 230 0 740 258 104 73 chr10 19269006 19269275 -126320013 - MER34 LTR ERV1 -247 295 1 307 325 167 0 chr10 19269352 19269472 -126319816 - L2 LINE L2 0 3272 3133 311 191 43 9 chr10 19269853 19269968 -126319320 + (TA)n Simple_repeat Simple_repeat 1 119 0 185 220 202 55 chr10 19270978 19271087 -126318201 - MIR3 SINE MIR -54 154 30 533 159 28 11 chr10 19272495 19272671 -126316617 + (TCTCTG)n Simple_repeat Simple_repeat 2 180 0 249 229 189 41 chr10 19273197 19273319 -126315969 - MIR SINE MIR -53 209 70 188 262 157 48 chr10 19273589 19273759 -126315529 + L2 LINE L2 687 886 -2428 197 0 0 67 chr10 19273759 19273789 -126315499 + (TCTCTG)n Simple_repeat Simple_repeat 3 30 0 188 262 157 48 chr10 19273789 19273828 -126315460 + L2 LINE L2 886 919 -2395 * 220 297 198 0 chr10 19273800 19273901 -126315387 + MIR SINE MIR 70 190 -72 184 347 48 16 chr10 19274278 19274402 -126314886 + L2 LINE L2 1290 1417 -1897 187 254 213 57 chr10 19274638 19274760 -126314528 + L2 LINE L2 3173 3313 0 182 185 108 77 chr10 19274763 19274828 -126314460 - MIR3 SINE MIR -50 158 92 243 0 0 0 chr10 19274874 19274901 -126314387 + (ATTG)n Simple_repeat Simple_repeat 1 27 0 1905 114 11 4 chr10 19274901 19275181 -126314107 - AluSx SINE Alu -30 282 1 493 301 193 1 chr10 19275377 19275693 -126313595 + L2 LINE L2 2665 3042 -271 1361 146 0 23 chr10 19276069 19276289 -126312999 + AluJo SINE Alu 85 299 -13 25 31 0 0 chr10 19276291 19276323 -126312965 + AT_rich Low_complexity Low_complexity 1 32 0 300 219 62 0 chr10 19277922 19277986 -126311302 + L2 LINE L2 3205 3272 0 3651 28 13 0 chr10 19277989 19278447 -126310841 - L1PA5 LINE L1 -436 5719 5256 3807 33 2 0 chr10 19278447 19278896 -126310392 + L1PA5 LINE L1 5700 6153 -1 3360 156 23 26 chr10 19279738 19280115 -126309173 - LTR36 LTR ERV1 -2 609 233 2328 94 7 0 chr10 19280115 19280422 -126308866 - AluSx SINE Alu -3 309 1 3360 156 23 26 chr10 19280422 19280655 -126308633 - LTR36 LTR ERV1 -378 233 1 208 307 35 44 chr10 19280978 19281092 -126308196 - L2 LINE L2 -23 3249 3137 305 284 142 22 chr10 19281592 19281726 -126307562 + MIR SINE MIR 34 183 -79 2282 87 3 3 chr10 19282560 19282858 -126306430 - AluSc SINE Alu -11 298 1 2311 97 0 3 chr10 19283496 19283806 -126305482 - AluY SINE Alu -2 309 1 490 216 151 8 chr10 19283810 19284069 -126305219 + LTR37A LTR ERV1 78 373 -53 384 207 43 9 chr10 19284074 19284190 -126305098 + LTR37A LTR ERV1 289 408 -18 1573 234 26 86 chr10 19284262 19284785 -126304503 + LTR9 LTR ERV1 1 479 -133 2213 103 6 10 chr10 19284785 19285096 -126304192 - AluSx SINE Alu -2 310 1 1573 234 26 86 chr10 19285096 19285223 -126304065 + LTR9 LTR ERV1 479 612 0 2151 105 20 3 chr10 19286042 19286346 -126302942 + AluY SINE Alu 1 309 -2 275 291 77 56 chr10 19286570 19286766 -126302522 + MIR SINE MIR 20 219 -43 1709 181 0 30 chr10 19287532 19287836 -126301452 - AluJb SINE Alu -13 299 5 289 216 0 0 chr10 19288223 19288274 -126301014 - MIR SINE MIR -79 129 79 27 29 0 0 chr10 19290712 19290746 -126298542 + AT_rich Low_complexity Low_complexity 1 34 0 504 272 103 5 chr10 19290746 19290930 -126298358 - MIR SINE MIR 0 262 61 280 271 0 0 chr10 19291305 19291364 -126297924 - MER113 DNA MER1_type? -5 516 458 25 31 0 0 chr10 19291472 19291504 -126297784 + AT_rich Low_complexity Low_complexity 1 32 0 705 318 28 16 chr10 19291636 19291888 -126297400 - MIR SINE MIR -1 261 7 244 220 9 28 chr10 19292212 19292321 -126296967 + (CATA)n Simple_repeat Simple_repeat 4 110 0 276 203 108 14 chr10 19294171 19294245 -126295043 - L2 LINE L2 -3 3310 3230 180 0 0 0 chr10 19295246 19295266 -126294022 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 208 296 126 44 chr10 19296144 19296303 -126292985 + MIR SINE MIR 19 190 -72 1918 114 3 48 chr10 19296328 19296652 -126292636 - AluSc SINE Alu 0 317 7 387 0 0 0 chr10 19296821 19296864 -126292424 + (TG)n Simple_repeat Simple_repeat 2 44 0 482 277 76 64 chr10 19297049 19297378 -126291910 + L2 LINE L2 2136 2468 -846 1718 145 72 3 chr10 19297521 19297811 -126291477 - AluSx SINE Alu -2 310 1 1007 75 0 0 chr10 19298272 19298392 -126290896 + AluSq/x SINE Alu 27 146 -167 463 162 0 0 chr10 19298393 19298467 -126290821 + Alu SINE Alu 237 310 -1 3825 150 60 15 chr10 19298723 19299457 -126289831 + LTR1B LTR ERV1 1 785 0 2493 260 195 23 chr10 19299536 19300546 -126288742 - L2 LINE L2 -632 2682 1499 2364 92 0 0 chr10 19300643 19300948 -126288340 - AluY SINE Alu -2 309 5 383 232 37 18 chr10 19301116 19301340 -126287948 + GA-rich Low_complexity Low_complexity 1 228 0 2213 119 0 6 chr10 19301341 19301652 -126287636 + AluSx SINE Alu 1 309 -3 458 86 0 0 chr10 19302183 19302241 -126287047 + AluYa8 SINE Alu 165 222 -88 28 0 0 0 chr10 19302249 19302277 -126287011 + AT_rich Low_complexity Low_complexity 1 28 0 477 290 11 49 chr10 19303150 19303333 -126285955 - MER69A DNA AcHobo -1 176 1 2047 115 21 7 chr10 19303827 19304114 -126285174 - AluSx SINE Alu -13 299 9 581 211 112 85 chr10 19304129 19304436 -126284852 - L1M4 LINE L1 -991 5155 4835 1465 228 60 20 chr10 19304436 19304787 -126284501 + MLT1A1 LTR MaLR 1 365 0 581 211 112 85 chr10 19304787 19304854 -126284434 - L1M4 LINE L1 -1311 4835 4771 * 1827 253 29 40 chr10 19304850 19305160 -126284128 + L1ME3A LINE L1 5149 5461 -709 1593 268 17 28 chr10 19305160 19305626 -126283662 + LTR40b LTR ERVL 2 462 0 1827 253 29 40 chr10 19305626 19306010 -126283278 + L1ME3A LINE L1 5461 5845 -325 272 348 18 0 chr10 19306127 19306239 -126283049 + L2 LINE L2 1552 1665 -1649 972 267 73 13 chr10 19306240 19306555 -126282733 + L1ME3A LINE L1 5837 6170 0 191 305 63 11 chr10 19306929 19307024 -126282264 - MIR SINE MIR -2 260 161 1941 131 10 20 chr10 19307809 19308107 -126281181 + AluJb SINE Alu 3 297 -15 964 114 34 13 chr10 19308212 19308361 -126280927 - MLT1A1 LTR MaLR -213 152 1 2800 87 19 5 chr10 19308646 19309014 -126280274 + THE1C LTR MaLR 1 373 -2 225 196 0 0 chr10 19309224 19309280 -126280008 + (TA)n Simple_repeat Simple_repeat 2 57 0 3296 43 0 0 chr10 19310009 19310377 -126278911 - L1PA4 LINE L1 -11 6144 5777 1771 148 4 14 chr10 19310467 19310744 -126278544 - AluJo SINE Alu -15 297 24 294 47 58 47 chr10 19310809 19310895 -126278393 + (TG)n Simple_repeat Simple_repeat 2 88 0 254 134 56 26 chr10 19310942 19311132 -126278156 + (TG)n Simple_repeat Simple_repeat 1 238 0 239 106 61 45 chr10 19311286 19311352 -126277936 + (TG)n Simple_repeat Simple_repeat 1 67 0 222 310 138 35 chr10 19311722 19311896 -126277392 - MIR SINE MIR -64 198 7 279 190 0 0 chr10 19312057 19312115 -126277173 + CT-rich Low_complexity Low_complexity 3 60 0 186 191 0 0 chr10 19312282 19312324 -126276964 + (CATATA)n Simple_repeat Simple_repeat 4 45 0 567 218 103 6 chr10 19312351 19312507 -126276781 + MIR SINE MIR 81 251 -11 1441 185 56 87 chr10 19312646 19313110 -126276178 + MER66A LTR ERV1 99 478 0 288 299 19 65 chr10 19313915 19314022 -126275266 - MIR3 SINE MIR -3 205 104 3077 224 30 5 chr10 19315654 19316398 -126272890 + L1M4 LINE L1 3963 4724 -1422 646 197 26 46 chr10 19316413 19316565 -126272723 + L1MB5 LINE L1 6026 6174 0 225 351 129 12 chr10 19317045 19317216 -126272072 + MIR SINE MIR 66 256 -6 220 315 195 0 chr10 19317384 19317533 -126271755 - L3b LINE CR1 -259 1324 1147 1940 115 7 28 chr10 19318111 19318398 -126270890 + AluSx SINE Alu 1 281 -31 405 0 0 0 chr10 19318398 19318443 -126270845 + (CA)n Simple_repeat Simple_repeat 1 45 0 937 191 94 83 chr10 19318506 19318902 -126270386 + L1M4 LINE L1 4752 5285 -861 2186 116 0 0 chr10 19318902 19319203 -126270085 + AluSc SINE Alu 1 301 -8 937 191 94 83 chr10 19319203 19319290 -126269998 + L1M4 LINE L1 5285 5369 -777 2203 169 5 10 chr10 19319290 19319680 -126269608 - L1M3 LINE L1 -381 5802 5415 42746 34 22 21 chr10 19319829 19325844 -126263444 - L1PA2 LINE L1 -135 6020 1 441 0 0 0 chr10 19325915 19325964 -126263324 + (TA)n Simple_repeat Simple_repeat 1 49 0 2010 141 7 0 chr10 19325964 19326255 -126263033 - AluSq SINE Alu -20 293 1 252 324 89 23 chr10 19326622 19326768 -126262520 + MIR3 SINE MIR 38 188 -54 746 186 6 14 chr10 19327280 19327323 -126261965 - L1M2 LINE L1 -696 5478 5436 2310 93 0 3 chr10 19327323 19327623 -126261665 - AluY SINE Alu -12 299 1 195 42 0 0 chr10 19327625 19327649 -126261639 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 746 186 6 14 chr10 19327649 19327798 -126261490 - L1M2 LINE L1 -739 5435 5330 1695 160 0 7 chr10 19327798 19328086 -126261202 - AluY SINE Alu -25 286 1 746 186 6 14 chr10 19328086 19328139 -126261149 - L1M2 LINE L1 -844 5330 5278 2432 73 0 7 chr10 19329690 19329991 -126259297 + AluY SINE Alu 1 299 -12 2292 108 0 3 chr10 19330366 19330671 -126258617 + AluSq SINE Alu 1 304 -9 2216 121 0 0 chr10 19330765 19331063 -126258225 + AluSx SINE Alu 1 298 -14 1658 152 0 0 chr10 19331338 19331582 -126257706 - AluJb SINE Alu -68 244 1 1763 157 19 28 chr10 19333897 19334221 -126255067 + L1MB5 LINE L1 5854 6174 0 239 293 30 40 chr10 19334479 19334578 -126254710 + MIR SINE MIR 40 137 -125 989 283 47 24 chr10 19334607 19334989 -126254299 - MER110 LTR ERV1 -20 471 81 292 276 89 24 chr10 19335352 19335475 -126253813 + MIR SINE MIR 16 146 -62 22 0 0 0 chr10 19335543 19335565 -126253723 + AT_rich Low_complexity Low_complexity 1 22 0 198 0 0 0 chr10 19335934 19335956 -126253332 + (TTTTTG)n Simple_repeat Simple_repeat 1 22 0 212 331 86 43 chr10 19336084 19336247 -126253041 + MIR3 SINE MIR 18 187 -21 2274 110 0 3 chr10 19336726 19337036 -126252252 - AluSx SINE Alu -3 309 1 1952 133 21 0 chr10 19337487 19337772 -126251516 + AluSx SINE Alu 1 291 -21 487 188 149 53 chr10 19338861 19339217 -126250071 + Zaphod DNA AcHobo 601 990 -3041 363 270 36 0 chr10 19339256 19339393 -126249895 + L1M4 LINE L1 3047 3188 -2958 833 246 116 69 chr10 19339417 19339926 -126249362 + L1MEc LINE L1 1389 1921 -4475 2248 66 4 7 chr10 19339967 19340241 -126249047 - L1PA8 LINE L1 -3 6169 5897 1592 61 0 0 chr10 19340244 19340441 -126248847 + L1PA8 LINE L1 5682 5878 -294 1355 244 66 15 chr10 19340436 19341100 -126248188 + L1MEc LINE L1 1961 2609 -3606 * 725 248 56 85 chr10 19342055 19342374 -126246914 + MLT1J1 LTR MaLR 12 321 -125 363 236 56 49 chr10 19343777 19343921 -126245367 - L2 LINE L2 0 3313 3169 561 68 0 0 chr10 19344219 19344293 -126244995 + (TTCC)n Simple_repeat Simple_repeat 2 75 0 5475 126 6 0 chr10 19344827 19345650 -126243638 - L1PB1 LINE L1 -1 6150 5323 1071 69 0 8 chr10 19345960 19346091 -126243197 + AluSg SINE Alu 5 134 -176 2307 99 0 7 chr10 19346091 19346395 -126242893 + AluSq SINE Alu 1 302 -11 2052 110 0 0 chr10 19346629 19346939 -126242349 + AluSx SINE Alu 1 310 0 328 249 118 81 chr10 19347556 19347777 -126241511 + L1M2 LINE L1 779 1007 -5842 205 298 0 0 chr10 19349067 19349124 -126240164 + (TA)n Simple_repeat Simple_repeat 2 58 0 184 302 0 0 chr10 19349913 19349956 -126239332 - L2 LINE L2 -83 3230 3188 2133 111 0 7 chr10 19351187 19351514 -126237774 - AluSx SINE Alu 0 325 1 1639 185 13 4 chr10 19351690 19352018 -126237270 + MER33 DNA MER1_type 1 323 -1 2038 140 0 16 chr10 19353441 19353611 -126235677 - AluSx SINE Alu -9 303 139 2092 117 0 26 chr10 19353611 19353920 -126235368 - AluSx SINE Alu -11 301 1 2038 140 0 16 chr10 19353920 19354057 -126235231 - AluSx SINE Alu -173 139 1 1841 159 7 39 chr10 19355847 19356156 -126233132 + AluJo SINE Alu 1 299 -13 22 35 0 0 chr10 19356306 19356335 -126232953 + AT_rich Low_complexity Low_complexity 1 29 0 395 285 38 44 chr10 19356974 19357132 -126232156 - MIR SINE MIR -18 244 88 2311 102 3 0 chr10 19357516 19357819 -126231469 + AluSp SINE Alu 1 304 -9 225 0 0 0 chr10 19357990 19358015 -126231273 + (T)n Simple_repeat Simple_repeat 1 25 0 249 57 0 0 chr10 19359844 19359879 -126229409 + (A)n Simple_repeat Simple_repeat 1 35 0 2116 120 0 0 chr10 19360693 19361015 -126228273 - AluSx SINE Alu 0 323 2 1178 201 135 66 chr10 19361465 19361592 -126227696 + MLT1B LTR MaLR 1 118 -272 2279 119 0 0 chr10 19361592 19361902 -126227386 - AluSx SINE Alu -2 310 1 1178 201 135 66 chr10 19361902 19362137 -126227151 + MLT1B LTR MaLR 118 388 -2 2220 251 46 42 chr10 19362184 19362941 -126226347 - L1ME3A LINE L1 -7 6163 5404 294 73 0 0 chr10 19362985 19363026 -126226262 + (GA)n Simple_repeat Simple_repeat 2 42 0 208 132 0 38 chr10 19363032 19363085 -126226203 + (TA)n Simple_repeat Simple_repeat 1 51 0 25 0 0 0 chr10 19363170 19363195 -126226093 + AT_rich Low_complexity Low_complexity 1 25 0 2060 87 0 99 chr10 19363881 19364213 -126225075 + AluSp SINE Alu 1 299 -14 650 298 101 0 chr10 19364392 19364620 -126224668 + MIR SINE MIR 12 262 0 432 290 51 7 chr10 19364729 19364867 -126224421 - MIR SINE MIR -116 146 3 218 316 0 0 chr10 19366144 19366201 -126223087 + CT-rich Low_complexity Low_complexity 2 58 0 1700 137 0 29 chr10 19368818 19369095 -126220193 + AluSx SINE Alu 43 311 -1 319 284 119 8 chr10 19370303 19370437 -126218851 - MIR SINE MIR -24 238 90 204 40 0 0 chr10 19372598 19372623 -126216665 + (TTCA)n Simple_repeat Simple_repeat 3 27 0 211 288 45 68 chr10 19372778 19372955 -126216333 - L2 LINE L2 -180 3092 2920 1082 177 6 0 chr10 19373117 19373298 -126215990 - AluSg/x SINE Alu -42 268 87 1672 131 123 0 chr10 19373940 19374200 -126215088 - AluSx SINE Alu -20 292 1 1644 68 0 5 chr10 19374376 19374582 -126214706 + L1PA4 LINE L1 5951 6155 0 1958 179 8 17 chr10 19374790 19375147 -126214141 + L1PA16 LINE L1 5813 6166 0 295 306 83 0 chr10 19375259 19375380 -126213908 + MIR SINE MIR 24 154 -108 866 145 101 0 chr10 19375814 19375952 -126213336 + FRAM SINE Alu 1 152 -24 264 30 0 0 chr10 19376172 19376205 -126213083 + (TG)n Simple_repeat Simple_repeat 2 34 0 29 18 0 55 chr10 19376841 19376896 -126212392 + AT_rich Low_complexity Low_complexity 1 52 0 805 282 241 10 chr10 19377478 19377893 -126211395 - MLT1K LTR MaLR -3 585 75 2117 125 20 0 chr10 19378549 19378852 -126210436 - AluSq SINE Alu -4 309 1 2134 119 0 20 chr10 19379744 19380046 -126209242 - AluSx SINE Alu -16 296 1 1161 188 86 139 chr10 19381324 19381486 -126207802 - MER4C LTR ERV1 -1 464 295 1232 151 192 41 chr10 19381486 19381757 -126207531 + AluJb SINE Alu 1 312 0 1161 188 86 139 chr10 19381757 19382084 -126207204 - MER4C LTR ERV1 -170 295 1 23 0 0 0 chr10 19382679 19382702 -126206586 + AT_rich Low_complexity Low_complexity 1 23 0 402 237 104 22 chr10 19384669 19384804 -126204484 + MIR SINE MIR 104 249 -13 2167 113 0 3 chr10 19384833 19385157 -126204131 + AluSg SINE Alu 1 310 0 1604 190 0 24 chr10 19385711 19386070 -126203218 - AluJo SINE Alu 0 352 1 747 230 26 7 chr10 19386330 19386482 -126202806 + FRAM SINE Alu 1 155 -11 332 207 45 117 chr10 19386593 19386688 -126202600 - L1ME4a LINE L1 -3 6118 6018 2187 109 3 3 chr10 19386688 19386990 -126202298 + AluSx SINE Alu 1 302 -10 332 207 45 117 chr10 19386990 19387160 -126202128 - L1ME4a LINE L1 -103 6018 5872 365 324 105 5 chr10 19387177 19387396 -126201892 + MIR SINE MIR 9 249 -13 21 36 0 0 chr10 19387475 19387503 -126201785 + AT_rich Low_complexity Low_complexity 1 28 0 2701 99 31 6 chr10 19387543 19387898 -126201390 - THE1B LTR MaLR 0 364 1 584 289 21 5 chr10 19388027 19388214 -126201074 + MIR SINE MIR 58 247 -15 1790 191 13 43 chr10 19388498 19388804 -126200484 - L1MC3 LINE L1 -13 7772 7458 870 143 0 71 chr10 19388804 19388838 -126200450 - L1PA11 LINE L1 0 6174 6139 237 108 0 0 chr10 19388838 19388875 -126200413 + (CAATT)n Simple_repeat Simple_repeat 4 40 0 870 143 0 71 chr10 19388875 19389008 -126200280 - L1PA11 LINE L1 -35 6139 6019 1663 158 8 8 chr10 19389008 19389274 -126200014 - AluJb SINE Alu -40 272 7 1790 191 13 43 chr10 19389274 19389358 -126199930 - L1MC3 LINE L1 -325 7460 7393 280 103 172 0 chr10 19389356 19389414 -126199874 - L1MB7 LINE L1 0 6184 6117 * 659 289 141 0 chr10 19389900 19390170 -126199118 - L2 LINE L2 0 3313 3006 3109 101 7 30 chr10 19390239 19390278 -126199010 - MSTA LTR MaLR -2 426 388 2343 102 3 0 chr10 19390278 19390583 -126198705 + AluSp SINE Alu 1 306 -7 3109 101 7 30 chr10 19390583 19390979 -126198309 - MSTA LTR MaLR -40 388 1 239 261 91 0 chr10 19391063 19391151 -126198137 + LTR11 LTR ERV 401 496 -188 265 253 13 0 chr10 19391201 19391276 -126198012 - L2 LINE L2 -183 3089 3014 21 36 0 0 chr10 19392243 19392271 -126197017 + AT_rich Low_complexity Low_complexity 1 28 0 516 189 0 0 chr10 19392330 19392473 -126196815 + CT-rich Low_complexity Low_complexity 1 143 0 1534 154 44 22 chr10 19392473 19392745 -126196543 - AluJo SINE Alu -34 278 1 247 247 0 14 chr10 19392766 19392839 -126196449 - L1ME4a LINE L1 -3 6118 6047 978 150 0 35 chr10 19393113 19393286 -126196002 - AluJo SINE Alu -25 287 121 614 304 124 34 chr10 19393533 19394056 -126195232 - L1ME4a LINE L1 -139 5982 5413 465 323 71 24 chr10 19394966 19395304 -126193984 - L2 LINE L2 -463 2851 2498 344 304 58 58 chr10 19395309 19395516 -126193772 - MIR SINE MIR -48 214 8 3719 124 4 0 chr10 19395589 19396122 -126193166 - L1PB1 LINE L1 -4 6147 5613 189 0 0 0 chr10 19396409 19396430 -126192858 + (TTCA)n Simple_repeat Simple_repeat 4 24 0 849 179 0 24 chr10 19396477 19396645 -126192643 - FRAM SINE Alu -5 171 8 3419 197 14 31 chr10 19396648 19397176 -126192112 - L1MB5 LINE L1 -37 6137 5622 1303 72 15 26 chr10 19397176 19397371 -126191917 - L1MA4 LINE L1 -1 6299 6107 3419 197 14 31 chr10 19397371 19397546 -126191742 - L1MB5 LINE L1 -552 5622 5446 600 302 44 44 chr10 19397904 19398219 -126191069 - L2 LINE L2 0 3313 2999 639 200 106 64 chr10 19400163 19400398 -126188890 - MIR SINE MIR -17 245 1 1833 127 3 77 chr10 19400434 19400757 -126188531 - AluJb SINE Alu -13 299 1 355 145 0 26 chr10 19401106 19401182 -126188106 + (TCTCC)n Simple_repeat Simple_repeat 2 75 0 320 295 45 27 chr10 19401287 19401399 -126187889 + L2 LINE L2 3159 3272 0 501 244 43 13 chr10 19401473 19401653 -126187635 - MLT1L LTR MaLR 0 615 397 315 279 38 0 chr10 19401735 19401814 -126187474 - MLT1L LTR MaLR -346 269 188 229 305 0 0 chr10 19401785 19401844 -126187444 - MLT1K LTR MaLR -357 231 173 * 35 24 0 0 chr10 19402025 19402067 -126187221 + AT_rich Low_complexity Low_complexity 1 42 0 247 203 39 55 chr10 19402089 19402271 -126187017 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 * 294 222 60 18 chr10 19402182 19402349 -126186939 + (TA)n Simple_repeat Simple_repeat 2 175 0 21 57 0 0 chr10 19402395 19402430 -126186858 + AT_rich Low_complexity Low_complexity 1 35 0 1118 294 109 29 chr10 19403327 19404081 -126185207 - L2 LINE L2 -13 3300 2484 390 21 0 0 chr10 19404081 19404128 -126185160 + (TG)n Simple_repeat Simple_repeat 2 48 0 1118 294 109 29 chr10 19404128 19404161 -126185127 - L2 LINE L2 -829 2484 2455 53 17 0 0 chr10 19404621 19404681 -126184607 + AT_rich Low_complexity Low_complexity 1 60 0 184 289 19 0 chr10 19405283 19405335 -126183953 - L2 LINE L2 -1 3271 3219 2130 122 0 0 chr10 19405415 19405702 -126183586 - AluSx SINE Alu -13 299 13 1395 177 25 11 chr10 19405718 19405995 -126183293 - L1MA5A LINE L1 -2 6295 6015 243 301 62 0 chr10 19406672 19406785 -126182503 + MIR SINE MIR 126 245 -17 204 256 51 51 chr10 19408701 19408779 -126180509 + MIR SINE MIR 35 112 -150 352 272 24 104 chr10 19408826 19408951 -126180337 + L2 LINE L2 3199 3313 0 638 284 120 9 chr10 19409316 19409541 -126179747 + MIR SINE MIR 13 262 0 2115 130 0 16 chr10 19410125 19410432 -126178856 - AluSx SINE Alu -10 302 1 1389 111 94 148 chr10 19411014 19411146 -126178142 + MER44D DNA MER2_type 1 139 -2352 2070 126 0 0 chr10 19411146 19411432 -126177856 - AluSx SINE Alu -10 302 17 1389 111 94 148 chr10 19411432 19411650 -126177638 + MER44D DNA MER2_type 139 602 -7 264 151 75 0 chr10 19411938 19411991 -126177297 + L1MA8 LINE L1 6232 6288 -3 815 158 0 0 chr10 19412324 19412444 -126176844 + FLAM_C SINE Alu 1 120 -23 1835 137 3 7 chr10 19412490 19412774 -126176514 + AluJo SINE Alu 23 305 -7 486 270 38 27 chr10 19414640 19414825 -126174463 + MIR SINE MIR 3 189 -73 552 358 29 8 chr10 19414994 19415240 -126174048 + MIR SINE MIR 12 262 0 217 242 0 45 chr10 19415298 19415364 -126173924 + GA-rich Low_complexity Low_complexity 5 67 0 21 0 0 0 chr10 19415710 19415731 -126173557 + AT_rich Low_complexity Low_complexity 1 21 0 409 304 45 56 chr10 19415810 19416096 -126173192 - L1ME3A LINE L1 -241 5929 5647 359 294 56 13 chr10 19416276 19416455 -126172833 - L1ME3A LINE L1 -479 5642 5458 344 283 86 0 chr10 19416485 19416683 -126172605 - L1ME3A LINE L1 -814 5332 5118 196 271 43 14 chr10 19417399 19417469 -126171819 + MIR3 SINE MIR 96 167 -41 2316 112 0 3 chr10 19418484 19418796 -126170492 + AluSx SINE Alu 1 311 -1 2033 138 0 3 chr10 19420154 19420443 -126168845 + AluSq SINE Alu 1 288 -25 185 286 186 0 chr10 19421169 19421239 -126168049 - L2 LINE L2 0 3272 3190 969 257 100 55 chr10 19421270 19421342 -126167946 - L2 LINE L2 -90 3223 3156 2146 136 0 0 chr10 19421342 19421651 -126167637 + AluSx SINE Alu 1 309 -3 969 257 100 55 chr10 19421651 19421979 -126167309 - L2 LINE L2 -157 3156 2805 193 328 15 15 chr10 19422556 19422623 -126166665 - MIR3 SINE MIR -31 177 111 1817 139 55 0 chr10 19422740 19423014 -126166274 + AluY SINE Alu 1 289 -22 1950 165 0 3 chr10 19423022 19423319 -126165969 + AluJb SINE Alu 1 296 -16 1907 139 14 3 chr10 19423912 19424206 -126165082 - AluSx SINE Alu -15 297 1 23 0 0 0 chr10 19424235 19424258 -126165030 + AT_rich Low_complexity Low_complexity 1 23 0 229 65 0 0 chr10 19424258 19424304 -126164984 - LTR66 LTR ERVL -171 439 394 252 213 0 0 chr10 19424304 19424365 -126164923 + L1MC4 LINE L1 6636 6696 -1346 522 0 0 0 chr10 19424366 19424424 -126164864 + (GA)n Simple_repeat Simple_repeat 2 59 0 824 139 49 0 chr10 19424536 19424658 -126164630 - AluSq/x SINE Alu -184 129 2 2248 154 0 23 chr10 19424688 19425032 -126164256 + MER1B DNA MER1_type 1 336 -1 1911 152 7 10 chr10 19425495 19425797 -126163491 + AluSx SINE Alu 3 303 -9 1280 237 78 72 chr10 19426015 19426490 -126162798 + L1MC5 LINE L1 7101 7583 -378 366 23 0 0 chr10 19426490 19426533 -126162755 + (CA)n Simple_repeat Simple_repeat 2 44 0 1280 237 78 72 chr10 19426533 19426728 -126162560 + L1MC5 LINE L1 7583 7775 -186 2177 124 0 0 chr10 19426755 19427053 -126162235 + AluSx SINE Alu 1 298 -14 240 207 207 50 chr10 19429468 19429589 -126159699 - MIR SINE MIR -82 180 41 404 167 22 0 chr10 19429639 19429729 -126159559 + CT-rich Low_complexity Low_complexity 1 92 0 1688 199 7 0 chr10 19429729 19430035 -126159253 - AluJb SINE Alu -4 308 1 1971 159 0 0 chr10 19430111 19430420 -126158868 - AluJb SINE Alu -1 311 3 201 207 17 52 chr10 19430612 19430670 -126158618 - MIR SINE MIR -112 96 41 1426 218 93 34 chr10 19431596 19432013 -126157275 - LTR47B LTR ERVL 0 443 2 180 143 0 0 chr10 19432223 19432236 -126157052 + (A)n Simple_repeat Simple_repeat 1 13 -22 2174 108 0 31 chr10 19432236 19432559 -126156729 + AluSq SINE Alu 1 313 0 180 143 0 0 chr10 19432559 19432580 -126156708 + (A)n Simple_repeat Simple_repeat 12 35 0 247 271 29 0 chr10 19432660 19432730 -126156558 + MIR SINE MIR 31 102 -160 2166 117 3 10 chr10 19432848 19433147 -126156141 - AluSq SINE Alu -16 297 1 2341 93 0 7 chr10 19435277 19435578 -126153710 - AluSx SINE Alu -8 304 6 415 243 0 107 chr10 19436326 19436495 -126152793 - MIR SINE MIR -52 210 60 1698 162 21 10 chr10 19436910 19437200 -126152088 + AluJb SINE Alu 1 293 -19 193 277 108 12 chr10 19437650 19437733 -126151555 + MIR SINE MIR 32 122 -86 188 333 48 48 chr10 19437821 19437926 -126151362 - L2 LINE L2 -10 3303 3199 2950 174 55 5 chr10 19438385 19438965 -126150323 + L1MB3 LINE L1 5532 6140 -43 2684 34 0 0 chr10 19438966 19439264 -126150024 + AluY SINE Alu 1 298 -13 1795 165 0 17 chr10 19439275 19439566 -126149722 + AluJo SINE Alu 1 286 -26 2245 128 141 11 chr10 19439894 19440270 -126149018 + MSTA LTR MaLR 2 426 -2 1917 245 17 21 chr10 19441283 19441752 -126147536 + MLT1C LTR MaLR 1 467 0 250 333 117 17 chr10 19442903 19443023 -126146265 + MIR3 SINE MIR 43 174 -34 3134 94 48 64 chr10 19443269 19443767 -126145521 - L1PB4 LINE L1 0 6156 5667 491 320 80 40 chr10 19444625 19445025 -126144263 + L2 LINE L2 2285 2700 -614 1409 138 111 16 chr10 19445112 19445401 -126143887 + MER4A LTR ERV1 264 638 -26 1553 77 5 0 chr10 19445504 19445698 -126143590 + L1PA7 LINE L1 5957 6151 -3 30 27 0 0 chr10 19445830 19445867 -126143421 + AT_rich Low_complexity Low_complexity 1 37 0 342 206 0 0 chr10 19446171 19446244 -126143044 + (TATG)n Simple_repeat Simple_repeat 3 75 0 23 33 0 0 chr10 19446307 19446337 -126142951 + AT_rich Low_complexity Low_complexity 1 30 0 2386 54 6 78 chr10 19446807 19447138 -126142150 + AluY SINE Alu 1 307 -4 2183 153 36 61 chr10 19447577 19448020 -126141268 + MSTB1 LTR MaLR 1 432 0 2786 191 12 18 chr10 19448815 19449319 -126139969 + MLT1D LTR MaLR 5 505 0 1575 186 0 39 chr10 19449424 19449735 -126139553 - AluJo SINE Alu -13 299 1 407 296 177 10 chr10 19450219 19450422 -126138866 + MIR SINE MIR 16 252 -10 22 0 0 0 chr10 19450429 19450451 -126138837 + AT_rich Low_complexity Low_complexity 1 22 0 1817 210 37 68 chr10 19450548 19450681 -126138607 + LTR55 LTR ERV 1 136 -412 1740 171 0 19 chr10 19450681 19450870 -126138418 - AluJo SINE Alu -8 304 122 194 0 39 0 chr10 19450870 19450896 -126138392 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1740 171 0 19 chr10 19450896 19451016 -126138272 - AluJo SINE Alu -190 122 1 1817 210 37 68 chr10 19451016 19451444 -126137844 + LTR55 LTR ERV 136 545 -3 614 200 70 1 chr10 19451719 19451859 -126137429 - MLT1A1 LTR MaLR 0 374 231 1111 153 99 10 chr10 19452016 19452218 -126137070 - MLT1A1 LTR MaLR -145 220 1 2462 303 195 26 chr10 19452832 19454603 -126134685 + L2 LINE L2 965 3046 -267 366 255 37 93 chr10 19455285 19455348 -126133940 + MIR SINE MIR 48 113 -149 2226 115 0 10 chr10 19455348 19455652 -126133636 - AluSx SINE Alu -11 301 1 366 255 37 93 chr10 19455652 19455688 -126133600 + MIR SINE MIR 113 149 -113 2096 149 131 11 chr10 19455688 19456070 -126133218 - MSTA LTR MaLR 0 428 1 366 255 37 93 chr10 19456070 19456130 -126133158 + MIR SINE MIR 149 199 -63 539 283 147 20 chr10 19457100 19457298 -126131990 + MIR SINE MIR 13 235 -27 419 297 173 40 chr10 19459050 19459739 -126129549 + L2 LINE L2 2535 3313 0 1769 161 0 17 chr10 19460762 19461084 -126128204 + AluJb SINE Alu 1 317 0 403 277 107 20 chr10 19461123 19461474 -126127814 - MLT1J LTR MaLR -63 448 6 285 237 0 17 chr10 19461479 19461538 -126127750 - L2 LINE L2 -31 3241 3184 448 357 77 21 chr10 19461657 19461859 -126127429 + L2 LINE L2 2925 3153 -119 2174 115 0 0 chr10 19461859 19462147 -126127141 - AluSx SINE Alu -24 288 1 448 357 77 21 chr10 19462147 19462269 -126127019 + L2 LINE L2 3153 3267 -5 2014 106 11 3 chr10 19462549 19462866 -126126422 + AluSq SINE Alu 1 319 0 1550 185 0 46 chr10 19463386 19463525 -126125763 + AluJo SINE Alu 1 120 -192 1972 127 0 78 chr10 19463525 19463856 -126125432 + AluSx SINE Alu 1 305 -7 1550 185 0 46 chr10 19463856 19464018 -126125270 + AluJo SINE Alu 120 288 -24 24 32 0 0 chr10 19466753 19466784 -126122504 + AT_rich Low_complexity Low_complexity 1 31 0 1457 76 0 0 chr10 19468282 19468467 -126120821 - L1MA2 LINE L1 0 6304 6120 2664 252 51 47 chr10 19468467 19469249 -126120039 - L1ME3A LINE L1 -14 6156 5368 1865 120 74 11 chr10 19469249 19469533 -126119755 - AluSg SINE Alu -8 302 1 2664 252 51 47 chr10 19469533 19469608 -126119680 - L1ME3A LINE L1 -802 5368 5295 457 329 46 20 chr10 19469678 19469931 -126119357 + MIR SINE MIR 3 261 -1 316 371 35 0 chr10 19470317 19470433 -126118855 - MIR SINE MIR -62 146 27 21 0 0 0 chr10 19470486 19470507 -126118781 + AT_rich Low_complexity Low_complexity 1 21 0 2064 116 3 3 chr10 19470709 19471003 -126118285 + AluSx SINE Alu 1 294 -18 323 192 14 0 chr10 19471071 19471144 -126118144 + (TATG)n Simple_repeat Simple_repeat 2 75 0 21 0 0 0 chr10 19471297 19471318 -126117970 + AT_rich Low_complexity Low_complexity 1 21 0 2294 121 0 0 chr10 19471426 19471733 -126117555 + AluSx SINE Alu 1 307 -5 459 245 105 7 chr10 19472002 19472145 -126117143 + MIR SINE MIR 95 251 -11 221 341 63 40 chr10 19472311 19472437 -126116851 - L2 LINE L2 -5 3267 3139 757 303 71 88 chr10 19473693 19474112 -126115176 + L2 LINE L2 2219 2621 -693 2119 176 24 11 chr10 19474112 19474482 -126114806 - THE1C LTR MaLR 0 375 1 757 303 71 88 chr10 19474482 19474812 -126114476 + L2 LINE L2 2621 2955 -359 213 346 0 25 chr10 19474919 19475000 -126114288 + L2 LINE L2 3231 3309 -4 203 88 29 0 chr10 19476109 19476143 -126113145 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 2660 116 17 8 chr10 19476607 19476968 -126112320 + THE1B LTR MaLR 1 364 0 359 323 21 53 chr10 19476970 19477159 -126112129 + MER5A DNA MER1_type 7 189 0 252 256 22 44 chr10 19477405 19477463 -126111825 - MLT1K LTR MaLR -486 102 45 233 29 0 29 chr10 19477463 19477498 -126111790 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 252 256 22 44 chr10 19477498 19477529 -126111759 - MLT1K LTR MaLR -543 45 15 1303 50 0 19 chr10 19479570 19479730 -126109558 + L1PA11 LINE L1 6017 6173 -1 21 36 0 0 chr10 19479731 19479759 -126109529 + AT_rich Low_complexity Low_complexity 1 28 0 259 212 0 91 chr10 19480617 19480683 -126108605 + AluJb SINE Alu 1 60 -242 2050 143 3 0 chr10 19480683 19480976 -126108312 - AluSx SINE Alu -18 294 1 1464 141 0 28 chr10 19480978 19481227 -126108061 + AluJb SINE Alu 52 293 -19 328 358 58 8 chr10 19481781 19481901 -126107387 - L2 LINE L2 0 3272 3147 851 151 0 0 chr10 19482294 19482413 -126106875 + FLAM_C SINE Alu 1 119 -24 21 0 0 0 chr10 19482808 19482829 -126106459 + AT_rich Low_complexity Low_complexity 1 21 0 1963 138 3 3 chr10 19482835 19483124 -126106164 + AluJb SINE Alu 5 293 -19 2042 130 3 0 chr10 19483894 19484178 -126105110 + AluSx SINE Alu 1 285 -27 560 248 177 20 chr10 19484343 19484541 -126104747 - MIR SINE MIR -5 257 29 416 322 57 11 chr10 19484572 19484749 -126104539 - MER91A DNA MER1_type -11 185 1 356 336 65 18 chr10 19484982 19485199 -126104089 - MIR SINE MIR -28 234 8 303 298 53 30 chr10 19485417 19485548 -126103740 - L2 LINE L2 -10 3303 3170 231 274 27 27 chr10 19485720 19485793 -126103495 - LTR16C LTR ERVL -14 477 405 1978 120 0 4 chr10 19485825 19486099 -126103189 + AluSx SINE Alu 33 305 -7 295 258 57 69 chr10 19486581 19486740 -126102548 + MIR SINE MIR 98 254 -8 475 141 0 0 chr10 19486839 19486910 -126102378 - THE1B LTR MaLR 0 375 305 7646 50 2 1 chr10 19486911 19487922 -126101366 + L1PA5 LINE L1 5132 6148 -6 27 0 0 0 chr10 19488156 19488183 -126101105 + AT_rich Low_complexity Low_complexity 1 27 0 2131 99 9 37 chr10 19488183 19488507 -126100781 - THE1B LTR MaLR -49 315 1 834 231 102 106 chr10 19489291 19489781 -126099507 + MLT1G1 LTR MaLR 108 595 0 745 249 95 4 chr10 19489993 19490234 -126099054 - Charlie4a DNA MER1_type -32 476 214 2549 58 0 6 chr10 19490332 19490644 -126098644 + AluY SINE Alu 2 311 0 836 225 48 5 chr10 19490810 19491019 -126098269 - Charlie4a DNA MER1_type -275 233 16 2107 134 0 0 chr10 19491143 19491435 -126097853 + AluSx SINE Alu 1 292 -20 1927 177 44 61 chr10 19491560 19491665 -126097623 - MLT1C LTR MaLR 0 467 362 2038 155 3 0 chr10 19491665 19491969 -126097319 + AluJo SINE Alu 1 305 -7 1927 177 44 61 chr10 19491969 19492338 -126096950 - MLT1C LTR MaLR -105 362 1 261 0 0 0 chr10 19492773 19492802 -126096486 + (CA)n Simple_repeat Simple_repeat 2 30 0 2074 149 0 0 chr10 19492860 19493168 -126096120 + AluSx SINE Alu 2 309 -3 2501 81 0 0 chr10 19493381 19493690 -126095598 - AluY SINE Alu -2 309 1 360 64 0 0 chr10 19494188 19494235 -126095053 + (T)n Simple_repeat Simple_repeat 1 47 0 1401 107 5 0 chr10 19494236 19494423 -126094865 - AluSx SINE Alu -124 188 1 2274 102 0 0 chr10 19496472 19496766 -126092522 + AluSg SINE Alu 1 294 -16 866 288 145 8 chr10 19498485 19498877 -126090411 - L2 LINE L2 -3 3310 2865 234 0 0 0 chr10 19500095 19500121 -126089167 + (T)n Simple_repeat Simple_repeat 1 26 0 471 290 130 10 chr10 19500915 19501122 -126088166 + MIR SINE MIR 1 232 -30 1752 156 3 45 chr10 19501359 19501667 -126087621 + AluJo SINE Alu 1 295 -17 2173 115 3 3 chr10 19502183 19502479 -126086809 + AluSq SINE Alu 1 296 -17 732 174 6 31 chr10 19503016 19503233 -126086055 + L1PA2 LINE L1 5999 6211 0 1031 165 0 0 chr10 19503616 19503774 -126085514 + AluJb SINE Alu 91 248 -64 3110 104 10 16 chr10 19504143 19504631 -126084657 + L1PB1 LINE L1 5666 6150 -1 1625 189 6 25 chr10 19504990 19505308 -126083980 + AluJo SINE Alu 1 312 0 1783 197 0 0 chr10 19505715 19506025 -126083263 - AluJo SINE Alu -2 310 1 313 302 60 20 chr10 19507406 19507555 -126081733 - Charlie8 DNA MER1_type -2260 157 3 882 122 0 0 chr10 19507628 19507751 -126081537 + FRAM SINE Alu 38 160 -16 184 301 56 28 chr10 19507870 19508013 -126081275 - L2 LINE L2 -1392 1922 1776 1979 141 3 0 chr10 19508952 19509242 -126080046 + AluSg SINE Alu 1 291 -19 351 206 206 53 chr10 19509257 19509427 -126079861 + L2 LINE L2 3117 3312 -1 2117 133 0 3 chr10 19509758 19510066 -126079222 - AluSx SINE Alu -1 311 5 945 167 10 16 chr10 19510097 19510289 -126078999 - L1PA15 LINE L1 -22 6143 5953 2261 89 7 3 chr10 19511229 19511533 -126077755 - AluSg SINE Alu -5 305 1 1500 393 3 0 chr10 19512100 19512408 -126076880 + AluSp SINE Alu 1 309 -4 1493 124 0 14 chr10 19512443 19512660 -126076628 - AluSx SINE Alu -96 216 3 238 234 74 84 chr10 19512741 19513040 -126076248 - HAL1 LINE L1 -1401 1106 811 2304 159 26 7 chr10 19513170 19513586 -126075702 - Tigger2a DNA MER2_type -8 426 3 23 0 0 0 chr10 19514131 19514154 -126075134 + AT_rich Low_complexity Low_complexity 1 23 0 189 352 74 0 chr10 19514758 19514866 -126074422 + MIR SINE MIR 147 262 0 844 219 38 9 chr10 19515043 19515253 -126074035 - MER20 DNA MER1_type 0 219 4 2055 121 0 7 chr10 19516829 19517111 -126072177 + AluSx SINE Alu 1 280 -32 266 0 0 29 chr10 19517112 19517147 -126072141 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1403 181 0 110 chr10 19517153 19517489 -126071799 + AluJo SINE Alu 1 299 -3 1326 197 138 26 chr10 19517502 19517893 -126071395 + MER63B DNA MER1_type 2 436 0 204 250 18 0 chr10 19517901 19517957 -126071331 + (TATATG)n Simple_repeat Simple_repeat 2 58 0 1607 218 6 19 chr10 19518224 19518540 -126070748 - AluJo SINE Alu 0 312 1 225 382 15 7 chr10 19518909 19519011 -126070277 + L2 LINE L2 1865 1970 -1344 2636 152 30 14 chr10 19519011 19519505 -126069783 - L1PA16 LINE L1 -1 6165 5664 225 382 15 7 chr10 19519505 19519538 -126069750 + L2 LINE L2 1970 2001 -1313 371 317 10 0 chr10 19519555 19519659 -126069629 - L2 LINE L2 0 3313 3209 6199 103 19 0 chr10 19519676 19521385 -126067903 + L1PA8 LINE L1 4412 6151 -21 38 0 0 0 chr10 19521385 19521423 -126067865 + AT_rich Low_complexity Low_complexity 1 38 0 578 274 98 8 chr10 19521515 19521770 -126067518 - L2 LINE L2 -225 3088 2811 202 156 44 0 chr10 19522088 19522133 -126067155 + (CTTTG)n Simple_repeat Simple_repeat 2 48 0 748 252 65 4 chr10 19522299 19522545 -126066743 + MIR SINE MIR 2 262 0 1670 104 0 0 chr10 19523217 19523458 -126065830 + L1MA1 LINE L1 6054 6294 -8 1871 157 0 10 chr10 19523649 19523949 -126065339 + AluJo SINE Alu 1 297 -15 25 0 0 0 chr10 19524643 19524668 -126064620 + AT_rich Low_complexity Low_complexity 1 25 0 1960 145 13 0 chr10 19524735 19525038 -126064250 - AluJo SINE Alu -5 307 1 230 327 27 36 chr10 19526067 19526177 -126063111 - L2 LINE L2 -211 3061 2953 1953 144 0 35 chr10 19526349 19526661 -126062627 + AluSx SINE Alu 1 301 -11 308 233 70 0 chr10 19526662 19526748 -126062540 - MIR SINE MIR -25 237 146 475 254 16 0 chr10 19526767 19526893 -126062395 + MER45A DNA AcHobo 46 173 -5 1776 167 0 20 chr10 19526972 19527272 -126062016 - AluJo SINE Alu -16 296 3 638 131 42 24 chr10 19527283 19527451 -126061837 + CT-rich Low_complexity Low_complexity 4 174 0 204 195 61 24 chr10 19527466 19527548 -126061740 + CT-rich Low_complexity Low_complexity 4 88 0 1484 182 38 4 chr10 19527550 19527814 -126061474 - AluJb SINE Alu -39 273 1 1981 136 0 7 chr10 19528516 19528802 -126060486 - AluJb SINE Alu -23 289 6 1986 142 3 16 chr10 19529191 19529507 -126059781 - AluSx SINE Alu 0 312 1 809 229 17 22 chr10 19529995 19530174 -126059114 + MER5B DNA MER1_type 1 178 0 272 200 171 0 chr10 19530718 19530788 -126058500 - Charlie1 DNA MER1_type -2678 83 2 204 40 0 0 chr10 19531275 19531300 -126057988 + (A)n Simple_repeat Simple_repeat 1 25 0 2120 123 0 16 chr10 19531601 19531918 -126057370 - AluSx SINE Alu 0 312 1 1572 199 36 0 chr10 19532146 19532423 -126056865 + AluJo SINE Alu 1 287 -25 2252 99 0 0 chr10 19532452 19532744 -126056544 - AluSg SINE Alu -18 292 1 2257 103 0 0 chr10 19532771 19533061 -126056227 - AluSc SINE Alu -19 290 1 897 200 0 18 chr10 19533085 19533250 -126056038 + FRAM SINE Alu 1 162 -4 215 314 121 32 chr10 19533458 19533582 -126055706 - MIR SINE MIR -58 150 16 593 321 88 25 chr10 19533663 19534270 -126055018 - L2 LINE L2 -257 3015 2264 1083 174 5 18 chr10 19536337 19536555 -126052733 - MER20 DNA MER1_type -4 215 1 207 283 221 0 chr10 19536570 19536683 -126052605 - MIR SINE MIR -6 256 119 1697 122 30 64 chr10 19537074 19537369 -126051919 + AluSx SINE Alu 5 289 -23 420 20 0 0 chr10 19537562 19537611 -126051677 + (CA)n Simple_repeat Simple_repeat 2 50 0 570 220 35 78 chr10 19537872 19538114 -126051174 - LTR37B LTR ERV1 -2 466 236 2100 136 7 3 chr10 19538114 19538415 -126050873 + AluSq SINE Alu 1 302 -11 570 220 35 78 chr10 19538415 19538454 -126050834 - LTR37B LTR ERV1 -232 236 197 365 262 35 48 chr10 19538662 19538807 -126050481 - L1ME4a LINE L1 -16 6105 5963 1484 183 98 7 chr10 19538856 19539177 -126050111 - AluJo SINE Alu 0 347 1 22 0 0 0 chr10 19539314 19539336 -126049952 + AT_rich Low_complexity Low_complexity 1 22 0 320 138 0 15 chr10 19539599 19539664 -126049624 - L1MA9 LINE L1 -34 6278 6215 * 1670 183 42 13 chr10 19539639 19540230 -126049058 + L1M2 LINE L1 4929 5535 -743 325 252 205 16 chr10 19540267 19540394 -126048894 - L1ME4a LINE L1 -287 5883 5733 448 171 18 9 chr10 19540395 19540506 -126048782 + CT-rich Low_complexity Low_complexity 1 112 0 1971 159 10 7 chr10 19540506 19540815 -126048473 - AluJo SINE Alu -2 310 1 281 289 61 18 chr10 19540900 19541014 -126048274 - L1ME4a LINE L1 -516 5654 5536 2064 128 0 0 chr10 19541014 19541304 -126047984 + AluSx SINE Alu 1 290 -22 1304 227 40 12 chr10 19541366 19541687 -126047601 - MER58B DNA MER1_type -10 331 2 238 288 96 44 chr10 19541687 19541937 -126047351 - L1M3 LINE L1 -667 5516 5254 739 163 8 0 chr10 19544119 19544242 -126045046 + FLAM_C SINE Alu 1 124 -19 215 137 0 39 chr10 19544594 19544645 -126044643 + (TATATG)n Simple_repeat Simple_repeat 4 52 0 473 295 42 6 chr10 19545130 19545296 -126043992 + MIR SINE MIR 14 185 -77 2063 109 3 11 chr10 19546144 19546427 -126042861 - AluSx SINE Alu -15 297 17 252 152 0 22 chr10 19546463 19546509 -126042779 + AluSp SINE Alu 116 160 -143 194 83 56 0 chr10 19546541 19546577 -126042711 + A-rich Low_complexity Low_complexity 2 39 0 319 285 101 76 chr10 19546677 19547045 -126042243 - L1ME4a LINE L1 -180 5941 5565 445 124 155 21 chr10 19547279 19547376 -126041912 + LTR9B LTR ERV1 449 558 -86 2283 91 0 0 chr10 19547913 19548209 -126041079 - AluSg SINE Alu -14 296 1 1928 143 0 0 chr10 19548389 19548668 -126040620 - AluJb SINE Alu -33 279 1 1675 117 38 62 chr10 19548933 19549248 -126040040 - AluSx SINE Alu 0 308 1 210 330 26 0 chr10 19549250 19549349 -126039939 + MIR SINE MIR 52 153 -61 363 213 0 0 chr10 19550203 19550283 -126039005 + (TGGA)n Simple_repeat Simple_repeat 2 81 0 1974 107 40 0 chr10 19550285 19550557 -126038731 - AluSx SINE Alu -27 285 3 1540 188 7 11 chr10 19550593 19550870 -126038418 + AluJo SINE Alu 1 276 -36 1620 174 31 43 chr10 19551300 19551627 -126037661 + L1MB3 LINE L1 5858 6180 -3 21 36 0 0 chr10 19551684 19551712 -126037576 + AT_rich Low_complexity Low_complexity 1 28 0 2356 82 0 3 chr10 19551719 19552010 -126037278 + AluSq SINE Alu 1 290 -23 183 42 0 0 chr10 19552019 19552043 -126037245 + (TAA)n Simple_repeat Simple_repeat 2 25 0 318 291 27 27 chr10 19552043 19552185 -126037103 - MIR SINE MIR -80 182 41 666 160 0 0 chr10 19552575 19552675 -126036613 - FRAM SINE Alu -22 154 55 189 107 0 0 chr10 19552899 19552927 -126036361 + (T)n Simple_repeat Simple_repeat 1 28 0 2263 102 0 0 chr10 19554887 19555180 -126034108 + AluSg SINE Alu 2 294 -16 195 289 0 60 chr10 19555819 19555902 -126033386 + MIR SINE MIR 76 153 -109 1706 125 33 4 chr10 19556636 19556950 -126032338 + Tigger4(Zombi) DNA MER2_type 1 2725 -6 2247 113 0 6 chr10 19557380 19557691 -126031597 - AluSg1 SINE Alu 0 309 1 180 111 0 0 chr10 19558167 19558194 -126031094 + (TTA)n Simple_repeat Simple_repeat 2 28 0 1849 175 10 0 chr10 19558382 19558685 -126030603 - AluJb SINE Alu -6 306 1 2689 26 3 0 chr10 19558694 19558998 -126030290 - AluY SINE Alu -6 305 1 434 226 105 50 chr10 19559033 19559214 -126030074 - MER20B DNA MER1_type -62 721 531 949 238 70 30 chr10 19559285 19559613 -126029675 - MER20B DNA MER1_type -381 402 62 182 347 105 32 chr10 19559693 19559788 -126029500 + L2 LINE L2 3170 3271 -1 1879 152 0 3 chr10 19559860 19560143 -126029145 - AluSx SINE Alu -30 282 1 309 300 0 0 chr10 19560144 19560224 -126029064 - L2 LINE L2 0 3313 3234 324 0 0 0 chr10 19560253 19560289 -126028999 + (TC)n Simple_repeat Simple_repeat 2 37 0 1889 154 0 7 chr10 19560973 19561291 -126027997 - AluSx SINE Alu 0 316 1 1432 95 0 5 chr10 19561320 19561509 -126027779 - L1PA7 LINE L1 0 6154 5967 246 239 70 0 chr10 19561874 19561945 -126027343 - MIR SINE MIR -85 177 102 1772 155 14 17 chr10 19561950 19562241 -126027047 - AluJo SINE Alu -22 290 1 348 287 70 0 chr10 19562255 19562370 -126026918 - MIR SINE MIR -38 224 102 1725 162 7 24 chr10 19562946 19563243 -126026045 + AluJb SINE Alu 20 311 -1 248 207 9 81 chr10 19563576 19563687 -126025601 - AluJb SINE Alu -169 133 31 1694 118 118 11 chr10 19564251 19564531 -126024757 + AluSg SINE Alu 1 310 0 276 305 62 45 chr10 19565249 19565421 -126023867 + MIR SINE MIR 3 174 -82 1884 136 13 27 chr10 19565542 19565843 -126023445 - AluSq SINE Alu -13 300 4 2160 127 3 0 chr10 19565893 19566192 -126023096 - AluSx SINE Alu -12 300 1 361 342 30 40 chr10 19566577 19566776 -126022512 - MIR3 SINE MIR -4 204 8 276 324 140 0 chr10 19566807 19566943 -126022345 + MIR3 SINE MIR 23 177 -31 2565 53 0 0 chr10 19567777 19568076 -126021212 + AluY SINE Alu 2 300 -11 1441 100 220 17 chr10 19568154 19568395 -126020893 + AluSg1 SINE Alu 1 290 -19 21 0 0 0 chr10 19568871 19568892 -126020396 + AT_rich Low_complexity Low_complexity 1 21 0 2208 123 0 0 chr10 19571215 19571515 -126017773 + AluSx SINE Alu 1 300 -12 770 153 178 13 chr10 19571629 19571786 -126017502 + MER3 DNA MER1_type 1 183 -26 315 247 27 0 chr10 19571807 19571880 -126017408 + MER5A DNA MER1_type 11 85 -104 1909 156 0 19 chr10 19571883 19572190 -126017098 - AluSx SINE Alu -11 301 1 268 296 0 0 chr10 19572425 19572513 -126016775 + (TA)n Simple_repeat Simple_repeat 2 89 0 310 241 118 59 chr10 19572518 19572688 -126016600 - L1ME LINE L1 -418 5703 5524 8071 20 0 4 chr10 19572800 19573999 -126015289 - L1PA4 LINE L1 -2 6153 4949 2090 141 3 0 chr10 19573999 19574296 -126014992 - AluSq SINE Alu -14 299 2 8071 20 0 4 chr10 19574296 19574326 -126014962 - L1PA4 LINE L1 -1206 4949 4920 291 288 247 7 chr10 19574338 19574484 -126014804 + MIR SINE MIR 82 262 0 1048 166 0 33 chr10 19574525 19574706 -126014582 - AluJo SINE Alu -137 175 1 200 274 20 0 chr10 19574829 19574880 -126014408 - L2 LINE L2 0 3313 3262 479 335 138 5 chr10 19574992 19575216 -126014072 - MIR SINE MIR -1 261 8 897 142 0 35 chr10 19576036 19576177 -126013111 + AluJo SINE Alu 1 136 -176 214 300 3 35 chr10 19576386 19576471 -126012817 - MIR3 SINE MIR -53 155 92 1287 133 36 0 chr10 19576618 19576814 -126012474 + AluJo SINE Alu 93 295 -17 4630 112 14 26 chr10 19577502 19578060 -126011228 + L1MA2 LINE L1 5561 6109 -195 2726 114 57 71 chr10 19578060 19578553 -126010735 - LTR19A LTR ERV1 0 486 1 4630 112 14 26 chr10 19578553 19578725 -126010563 + L1MA2 LINE L1 6109 6282 -22 1591 219 49 0 chr10 19578969 19579294 -126009994 - MER58B DNA MER1_type 0 341 1 1675 170 31 7 chr10 19580057 19580345 -126008943 + AluJo SINE Alu 1 295 -17 195 271 86 0 chr10 19580492 19580562 -126008726 - L2 LINE L2 -12 3301 3226 1575 142 8 132 chr10 19580732 19580793 -126008495 - L1MB3 LINE L1 -1 6182 6115 2060 132 6 6 chr10 19580793 19581104 -126008184 - AluSx SINE Alu -1 311 1 1575 142 8 132 chr10 19581104 19581296 -126007992 - L1MB3 LINE L1 -68 6115 5989 1794 174 0 4 chr10 19581296 19581577 -126007711 - AluJb SINE Alu -32 280 1 1575 142 8 132 chr10 19581577 19581702 -126007586 - L1MB3 LINE L1 -194 5989 5850 2296 114 0 0 chr10 19582038 19582346 -126006942 - AluSx SINE Alu -4 308 1 405 96 0 0 chr10 19582819 19582871 -126006417 + Alu SINE Alu 2 53 -258 379 191 191 22 chr10 19582885 19582974 -126006314 + L1ME LINE L1 5523 5626 -544 2227 94 3 3 chr10 19583000 19583298 -126005990 + AluSg SINE Alu 1 298 -12 4641 77 7 0 chr10 19583971 19584554 -126004734 - L1PA10 LINE L1 -3 6165 5579 450 277 98 36 chr10 19584835 19585059 -126004229 - L2 LINE L2 -526 2788 2551 463 256 91 35 chr10 19585099 19585298 -126003990 - L2 LINE L2 -29 3284 3075 2213 121 0 0 chr10 19585304 19585594 -126003694 - AluSx SINE Alu -22 290 1 1763 177 3 16 chr10 19586032 19586348 -126002940 + AluJb SINE Alu 1 312 0 466 227 43 64 chr10 19586524 19586587 -126002701 - MER5B DNA MER1_type -2 176 113 2113 111 17 10 chr10 19586587 19586884 -126002404 + AluSx SINE Alu 1 299 -13 466 227 43 64 chr10 19586884 19586961 -126002327 - MER5B DNA MER1_type -65 113 39 1204 95 0 85 chr10 19587062 19587251 -126002037 + AluSp SINE Alu 129 301 -12 627 277 99 52 chr10 19587329 19587903 -126001385 - L1MC4a LINE L1 -1923 5885 5261 2440 62 0 13 chr10 19587989 19588295 -126000993 - AluY SINE Alu -9 302 1 201 292 77 15 chr10 19588384 19588449 -126000839 + L2 LINE L2 3154 3222 -50 186 337 117 18 chr10 19588696 19588859 -126000429 + L2 LINE L2 2880 3058 -214 235 165 94 59 chr10 19589011 19589096 -126000192 - L2 LINE L2 -37 3276 3189 1145 208 0 0 chr10 19589338 19589554 -125999734 - AluJb SINE Alu -4 308 93 831 167 0 0 chr10 19589677 19589803 -125999485 - FLAM_C SINE Alu -17 126 1 1835 152 7 10 chr10 19590889 19591185 -125998103 - AluJo SINE Alu -17 295 1 268 217 101 39 chr10 19591599 19591728 -125997560 - L1M LINE L1 -2406 5402 5266 2188 103 0 3 chr10 19591966 19592258 -125997030 - AluSg SINE Alu -19 291 1 258 314 38 38 chr10 19592606 19592711 -125996577 - MIR SINE MIR -63 145 41 759 280 123 68 chr10 19593201 19593391 -125995897 - L2 LINE L2 0 3313 3135 2100 135 7 3 chr10 19593391 19593695 -125995593 + AluJb SINE Alu 1 305 -7 759 280 123 68 chr10 19593695 19593975 -125995313 - L2 LINE L2 -178 3135 2817 * 1389 261 55 17 chr10 19593955 19594414 -125994874 - L2 LINE L2 -1197 2117 1642 2102 116 39 0 chr10 19594673 19594958 -125994330 + AluSq SINE Alu 1 296 -17 1882 117 7 58 chr10 19595693 19596002 -125993286 - AluSg SINE Alu -17 293 1 369 245 252 7 chr10 19596367 19596514 -125992774 + MIR SINE MIR 80 262 0 206 105 26 0 chr10 19596840 19596878 -125992410 + GA-rich Low_complexity Low_complexity 2 40 0 439 315 113 70 chr10 19596925 19597325 -125991963 + L2 LINE L2 2876 3292 -21 2051 133 0 0 chr10 19597703 19597997 -125991291 - AluSx SINE Alu -12 300 7 2262 95 3 0 chr10 19598234 19598517 -125990771 - AluSx SINE Alu -28 284 1 1615 125 9 0 chr10 19598931 19599155 -125990133 + AluSx SINE Alu 1 226 -86 734 146 0 31 chr10 19599255 19599385 -125989903 - FRAM SINE Alu -21 155 30 804 127 475 12 chr10 19599387 19599646 -125989642 + LTR29 LTR ERV1 46 424 -198 784 181 58 6 chr10 19599640 19599811 -125989477 + LTR49 LTR ERV1 416 595 0 * 2583 143 46 22 chr10 19600070 19600093 -125989195 + MER4C LTR ERV1 1 22 -443 2043 127 10 0 chr10 19600093 19600392 -125988896 + AluSq SINE Alu 1 302 -11 2583 143 46 22 chr10 19600392 19600822 -125988466 + MER4C LTR ERV1 22 465 0 3814 136 20 36 chr10 19600862 19601114 -125988174 + MER41B LTR ERV1 1 255 -380 4123 116 14 31 chr10 19601114 19601291 -125987997 + MER51A LTR ERV1 1 179 -455 1970 152 0 23 chr10 19601291 19601594 -125987694 - AluSx SINE Alu -16 296 1 4123 116 14 31 chr10 19601594 19602061 -125987227 + MER51A LTR ERV1 179 634 0 3814 136 20 36 chr10 19602061 19602453 -125986835 + MER41B LTR ERV1 255 635 0 227 289 13 0 chr10 19602518 19602594 -125986694 + MIR SINE MIR 168 244 -18 2737 244 63 30 chr10 19602805 19603615 -125985673 + MER21B LTR ERV1 12 848 -15 414 144 5 0 chr10 19603907 19603980 -125985308 + MER4C LTR ERV1 389 452 -13 318 324 88 0 chr10 19604281 19604429 -125984859 - MIR3 SINE MIR -19 189 29 185 296 28 78 chr10 19605353 19605495 -125983793 + MER5B DNA MER1_type 1 135 -43 2465 96 0 0 chr10 19605788 19606100 -125983188 + AluSx SINE Alu 1 312 0 2332 98 0 3 chr10 19607000 19607305 -125981983 - AluSq SINE Alu -9 304 1 268 222 65 9 chr10 19607757 19607865 -125981423 + (TATAG)n Simple_repeat Simple_repeat 2 115 0 * 312 136 57 62 chr10 19607846 19608022 -125981266 + (TA)n Simple_repeat Simple_repeat 2 176 0 635 150 0 0 chr10 19608022 19608122 -125981166 - AluS SINE Alu -211 101 2 21 0 0 0 chr10 19608216 19608237 -125981051 + AT_rich Low_complexity Low_complexity 1 21 0 226 250 0 0 chr10 19608642 19608694 -125980594 + MIR3 SINE MIR 103 154 -54 1262 153 59 21 chr10 19609309 19609545 -125979743 - AluJo SINE Alu -11 301 57 26 0 0 0 chr10 19609545 19609571 -125979717 + AT_rich Low_complexity Low_complexity 1 26 0 2069 132 4 0 chr10 19609669 19609979 -125979309 + AluSp SINE Alu 1 311 0 1715 176 29 10 chr10 19610084 19610390 -125978898 - AluJb SINE Alu 0 312 1 2018 119 7 0 chr10 19611416 19611693 -125977595 - AluSx SINE Alu -33 279 1 1464 155 40 16 chr10 19612073 19612325 -125976963 + AluJo SINE Alu 39 296 -16 2103 132 3 0 chr10 19612586 19612890 -125976398 + AluSx SINE Alu 1 305 -7 258 300 105 32 chr10 19613099 19613221 -125976067 + L2 LINE L2 2149 2261 -1053 2203 128 0 0 chr10 19613221 19613519 -125975769 - AluSx SINE Alu -14 298 1 258 300 105 32 chr10 19613519 19613643 -125975645 + L2 LINE L2 2261 2413 -901 199 255 99 45 chr10 19613848 19614116 -125975172 - L2 LINE L2 -696 2618 2259 994 149 52 17 chr10 19614123 19614297 -125974991 - AluJ SINE Alu 0 312 133 514 309 105 41 chr10 19614424 19614836 -125974452 - L2 LINE L2 -1275 2039 1655 1386 179 12 86 chr10 19614836 19615160 -125974128 + AluJb SINE Alu 1 300 -12 514 309 105 41 chr10 19615160 19615194 -125974094 - L2 LINE L2 -1659 1655 1625 881 137 0 15 chr10 19615194 19615325 -125973963 - AluJ SINE Alu -173 129 1 514 309 105 41 chr10 19615325 19615505 -125973783 - L2 LINE L2 -1689 1625 1372 2362 110 0 0 chr10 19615510 19615820 -125973468 + AluSg SINE Alu 1 310 0 1909 147 3 7 chr10 19616012 19616297 -125972991 + AluJo SINE Alu 1 284 -28 198 0 0 0 chr10 19616780 19616802 -125972486 + (A)n Simple_repeat Simple_repeat 1 22 0 1252 119 45 15 chr10 19616868 19617070 -125972218 + MER1B DNA MER1_type 132 339 0 1941 123 55 0 chr10 19617353 19617646 -125971642 + AluSp SINE Alu 1 309 -4 1858 169 10 0 chr10 19617662 19617958 -125971330 - AluJb SINE Alu -13 299 1 210 256 0 0 chr10 19618450 19618493 -125970795 + (TATG)n Simple_repeat Simple_repeat 2 44 0 2067 124 31 0 chr10 19618551 19618842 -125970446 - AluSx SINE Alu -12 300 1 2307 103 3 0 chr10 19619502 19619803 -125969485 + AluSx SINE Alu 1 302 -10 266 313 62 18 chr10 19620052 19620164 -125969124 - L2 LINE L2 0 3313 3197 455 313 120 6 chr10 19620429 19620719 -125968569 + L2 LINE L2 2732 3053 -260 1254 186 115 0 chr10 19620727 19620980 -125968308 - AluJo SINE Alu -30 282 1 1483 214 33 52 chr10 19621037 19621401 -125967887 + MLT1A1 LTR MaLR 1 357 -8 263 299 104 7 chr10 19621404 19621558 -125967730 + L2 LINE L2 3115 3283 -30 250 336 100 0 chr10 19621588 19621698 -125967590 + L3 LINE CR1 430 550 -1027 658 266 76 55 chr10 19621839 19622366 -125966922 + MER34 LTR ERV1 1 538 -4 193 283 100 30 chr10 19622506 19622700 -125966588 + L3 LINE CR1 1151 1399 -178 2371 74 0 37 chr10 19623039 19623362 -125965926 + AluY SINE Alu 1 311 0 437 250 81 7 chr10 19623669 19623805 -125965483 + MLT1J2 LTR MaLR 1 146 -304 2359 104 3 0 chr10 19624297 19624605 -125964683 - AluSp SINE Alu -4 309 1 1517 198 14 4 chr10 19624824 19625102 -125964186 + AluJo SINE Alu 1 281 -31 332 203 0 0 chr10 19625125 19625184 -125964104 + L1MB3 LINE L1 5671 5729 -442 1735 151 14 7 chr10 19625268 19625560 -125963728 + L1MB3 LINE L1 5704 5997 -186 1116 106 65 0 chr10 19625564 19625734 -125963554 + MSTA LTR MaLR 1 181 -247 1929 141 28 3 chr10 19625734 19626025 -125963263 - AluSx SINE Alu -14 298 1 1608 153 21 24 chr10 19627158 19627446 -125961842 - AluJo SINE Alu -14 298 12 806 178 32 81 chr10 19627639 19627886 -125961402 + MER106A DNA MER1_type 2 236 0 215 350 40 0 chr10 19628137 19628237 -125961051 - L2 LINE L2 -1 3271 3168 1976 128 0 17 chr10 19628279 19628575 -125960713 + AluSx SINE Alu 1 291 -21 369 293 171 43 chr10 19628733 19629225 -125960063 - L2 LINE L2 -337 2977 2423 801 204 0 7 chr10 19629505 19629657 -125959631 + FRAM SINE Alu 1 151 -25 1390 218 3 17 chr10 19629783 19630072 -125959216 - AluJo SINE Alu -27 285 1 2113 107 12 47 chr10 19631277 19631596 -125957692 + AluSx SINE Alu 1 308 -4 340 264 182 0 chr10 19632519 19632640 -125956648 + MIR SINE MIR 41 183 -79 2511 50 10 3 chr10 19632809 19633109 -125956179 - AluY SINE Alu -7 304 3 674 242 6 0 chr10 19633514 19633671 -125955617 + MER5A DNA MER1_type 5 162 -27 2009 115 46 26 chr10 19633707 19634012 -125955276 - AluSq SINE Alu -2 311 1 878 194 6 18 chr10 19634059 19634224 -125955064 + FRAM SINE Alu 2 164 -2 891 200 0 18 chr10 19634548 19634713 -125954575 - FRAM SINE Alu -4 162 1 2094 129 0 23 chr10 19634737 19635046 -125954242 + AluSc SINE Alu 1 302 -7 1630 149 11 39 chr10 19635685 19635967 -125953321 + AluJo SINE Alu 1 274 -38 411 21 0 0 chr10 19635970 19636018 -125953270 + (CA)n Simple_repeat Simple_repeat 1 48 0 215 182 45 0 chr10 19636818 19636862 -125952426 + GA-rich Low_complexity Low_complexity 4 49 0 774 157 0 0 chr10 19636864 19636985 -125952303 - FLAM_C SINE Alu -22 121 1 1859 89 25 29 chr10 19641144 19641424 -125947864 + L1MA1 LINE L1 6017 6295 -7 28 48 0 0 chr10 19641424 19641466 -125947822 + AT_rich Low_complexity Low_complexity 1 42 0 1333 183 45 32 chr10 19642410 19642853 -125946435 - L1MB8 LINE L1 -6 6172 5597 1853 139 22 0 chr10 19642977 19643251 -125946037 + AluSx SINE Alu 1 280 -32 243 0 0 0 chr10 19643253 19643280 -125946008 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3251 132 33 4 chr10 19643640 19644119 -125945169 + MER1A DNA MER1_type 37 529 0 686 262 185 22 chr10 19644287 19644412 -125944876 - HAL1 LINE L1 -866 1641 1538 2126 135 3 0 chr10 19644412 19644723 -125944565 - AluSx SINE Alu 0 312 1 686 262 185 22 chr10 19644723 19645277 -125944011 - HAL1 LINE L1 -969 1538 851 2272 130 0 0 chr10 19645533 19645840 -125943448 - AluSx SINE Alu -5 307 1 1068 168 25 29 chr10 19646151 19646340 -125942948 - AluJo SINE Alu -10 302 113 1614 138 22 11 chr10 19646340 19646615 -125942673 + AluSq SINE Alu 24 301 -12 1068 168 25 29 chr10 19646615 19646663 -125942625 - AluJo SINE Alu -199 113 66 234 152 0 43 chr10 19646787 19646833 -125942455 - Alu SINE Alu -189 113 70 1755 194 3 13 chr10 19647298 19647613 -125941675 + AluJo SINE Alu 1 312 0 631 218 56 22 chr10 19647881 19648060 -125941228 - L1MB2 LINE L1 -36 6135 5951 451 206 21 0 chr10 19648057 19648154 -125941134 - L1MA4A LINE L1 -23 6280 6182 * 1306 158 65 1 chr10 19648162 19648525 -125940763 - L1MB1 LINE L1 -131 6052 5702 1808 140 19 0 chr10 19648527 19648792 -125940496 - AluSx SINE Alu -7 305 36 354 285 57 0 chr10 19648943 19649066 -125940222 - MIR SINE MIR -97 165 36 216 353 143 12 chr10 19649534 19649877 -125939411 + L2 LINE L2 1956 2343 -971 1818 168 20 3 chr10 19650047 19650350 -125938938 - AluJo SINE Alu -4 308 1 376 181 76 29 chr10 19650367 19650472 -125938816 - MER103 DNA DNA -2 164 55 2172 123 0 3 chr10 19651088 19651381 -125937907 - AluSx SINE Alu -20 292 1 533 289 26 68 chr10 19652448 19652714 -125936574 + MIR SINE MIR 3 257 -5 311 243 0 27 chr10 19652736 19652810 -125936478 - MIR SINE MIR -155 107 36 1109 159 10 5 chr10 19652839 19653046 -125936242 - MLT1A1 LTR MaLR -157 208 1 2177 138 0 0 chr10 19653118 19653416 -125935872 + AluSx SINE Alu 1 298 -14 936 84 0 0 chr10 19654092 19654223 -125935065 + (TA)n Simple_repeat Simple_repeat 1 131 0 2280 106 0 0 chr10 19654286 19654588 -125934700 - AluSc SINE Alu -7 302 1 2411 67 3 3 chr10 19654683 19654980 -125934308 + AluSq SINE Alu 1 297 -16 1716 169 54 10 chr10 19655212 19655508 -125933780 + AluJb SINE Alu 1 309 -3 2180 113 13 3 chr10 19656085 19656385 -125932903 + AluSg SINE Alu 1 303 -7 329 342 86 7 chr10 19657033 19657185 -125932103 - MIR SINE MIR -52 210 47 2149 135 0 3 chr10 19657597 19657900 -125931388 + AluSq SINE Alu 1 302 -11 180 334 122 29 chr10 19658087 19658473 -125930815 - L2 LINE L2 -1161 2153 1732 235 254 108 87 chr10 19658610 19658898 -125930390 + MLT1H LTR MaLR 114 407 -142 2256 106 3 0 chr10 19659061 19659362 -125929926 + AluSx SINE Alu 1 302 -10 2059 109 0 0 chr10 19659863 19660137 -125929151 - AluSx SINE Alu -4 308 35 1761 103 0 0 chr10 19660568 19660827 -125928461 - AluSc SINE Alu 0 308 50 2261 109 0 0 chr10 19660938 19661260 -125928028 + MER57B LTR ERV1 1 322 -112 923 262 91 80 chr10 19662110 19662648 -125926640 - MER41C LTR ERV1 -9 545 2 971 163 43 59 chr10 19662764 19662810 -125926478 - MLT2B1 LTR ERVL 0 520 475 204 40 0 0 chr10 19662810 19662835 -125926453 + (CA)n Simple_repeat Simple_repeat 2 26 0 189 0 0 0 chr10 19662834 19662855 -125926433 + (GA)n Simple_repeat Simple_repeat 2 22 0 * 971 163 43 59 chr10 19662835 19663248 -125926040 - MLT2B1 LTR ERVL -45 475 1 26 0 0 0 chr10 19663369 19663395 -125925893 + AT_rich Low_complexity Low_complexity 1 26 0 2256 121 0 6 chr10 19663788 19664103 -125925185 - AluSp SINE Alu 0 313 1 2019 125 7 20 chr10 19665206 19665501 -125923787 - AluSq SINE Alu -22 291 1 24 32 0 0 chr10 19666487 19666518 -125922770 + AT_rich Low_complexity Low_complexity 1 31 0 1701 204 64 9 chr10 19666638 19667074 -125922214 - MER66B LTR ERV1 0 486 27 552 279 126 10 chr10 19667189 19667587 -125921701 - L1ME3A LINE L1 -217 5936 5493 563 283 111 78 chr10 19667598 19667886 -125921402 - L1ME3A LINE L1 -748 5381 5104 1381 229 0 14 chr10 19667886 19668202 -125921086 + AluJo SINE Alu 1 312 0 563 283 111 78 chr10 19668202 19669059 -125920229 - L1ME3A LINE L1 -1025 5104 4277 701 210 0 0 chr10 19669059 19669183 -125920105 + FLAM_C SINE Alu 1 124 -9 563 283 111 78 chr10 19669183 19669457 -125919831 - L1ME3A LINE L1 -1852 4277 4013 1928 84 4 0 chr10 19669457 19669708 -125919580 - AluSp SINE Alu -13 300 49 563 283 111 78 chr10 19669708 19670323 -125918965 - L1ME3A LINE L1 -2116 4013 3278 308 255 36 31 chr10 19670489 19670681 -125918607 - L1ME3A LINE L1 -3139 2990 2798 2166 119 10 0 chr10 19670906 19671208 -125918080 + AluSx SINE Alu 1 305 -7 21 0 0 0 chr10 19671214 19671235 -125918053 + AT_rich Low_complexity Low_complexity 1 21 0 350 314 46 17 chr10 19671643 19671968 -125917320 - L1MEd LINE L1 -4762 1548 1173 927 126 0 15 chr10 19672046 19672181 -125917107 + FLAM_C SINE Alu 1 133 0 1613 158 10 38 chr10 19672208 19672499 -125916789 + AluJo SINE Alu 19 301 -11 1088 169 5 30 chr10 19672932 19673133 -125916155 + AluJb SINE Alu 89 284 -28 1609 177 10 30 chr10 19673483 19673782 -125915506 - AluJo SINE Alu -19 293 1 2208 133 0 0 chr10 19674264 19674564 -125914724 - AluSg SINE Alu -10 300 1 321 47 0 0 chr10 19674940 19674983 -125914305 + (TG)n Simple_repeat Simple_repeat 2 44 0 1641 167 11 11 chr10 19675052 19675368 -125913920 + AluJb SINE Alu 1 316 0 210 174 0 0 chr10 19675600 19675646 -125913642 + (TA)n Simple_repeat Simple_repeat 2 47 0 181 367 51 10 chr10 19675717 19675815 -125913473 - L2 LINE L2 -343 2971 2870 363 117 17 0 chr10 19676184 19676244 -125913044 - HY1 scRNA scRNA -5 107 47 369 0 0 0 chr10 19676375 19676416 -125912872 + (TTG)n Simple_repeat Simple_repeat 2 42 0 248 247 14 27 chr10 19676757 19676830 -125912458 - LTR33A LTR ERVL -8 515 444 257 192 0 0 chr10 19677005 19677057 -125912231 - Charlie1 DNA MER1_type -1 2760 2709 929 164 0 0 chr10 19677068 19677202 -125912086 - AluJo SINE Alu -178 134 1 308 247 0 0 chr10 19677206 19677283 -125912005 - Charlie1 DNA MER1_type -45 2716 2640 954 246 0 9 chr10 19677299 19677523 -125911765 - Charlie1 DNA MER1_type -2539 222 1 1952 149 0 3 chr10 19678011 19678300 -125910988 - AluJb SINE Alu -24 288 1 367 243 84 9 chr10 19679818 19679925 -125909363 - Tigger2 DNA MER2_type 0 2718 2604 331 221 0 0 chr10 19779927 19780004 -125809284 + AluSp/q SINE Alu 226 302 -1 1686 176 3 3 chr10 19780228 19780530 -125808758 + AluSx SINE Alu 1 302 -10 519 270 16 8 chr10 19780886 19781012 -125808276 - MER5A DNA MER1_type -4 185 59 3799 196 40 19 chr10 19781112 19782157 -125807131 - L1MB3 LINE L1 -67 6116 5046 1939 155 94 13 chr10 19782993 19783387 -125805901 + MSTA LTR MaLR 3 428 0 1148 221 10 31 chr10 19784170 19784459 -125804829 + AluSg SINE Alu 1 283 -17 718 164 0 31 chr10 19784876 19785004 -125804284 + FLAM_C SINE Alu 3 126 -7 21 57 0 0 chr10 19786270 19786305 -125802983 + AT_rich Low_complexity Low_complexity 1 35 0 1935 106 0 87 chr10 19786456 19786534 -125802754 + Tigger3(Golem) DNA MER2_type 2702 2785 -243 1747 146 71 10 chr10 19786534 19786828 -125802460 - AluSx SINE Alu 0 312 1 1935 106 0 87 chr10 19786828 19786842 -125802446 + Tigger3(Golem) DNA MER2_type 2785 2799 -229 2278 97 0 23 chr10 19786842 19787152 -125802136 - AluSg SINE Alu -7 303 1 1935 106 0 87 chr10 19787152 19787416 -125801872 + Tigger3(Golem) DNA MER2_type 2799 3028 0 741 263 30 26 chr10 19787450 19787682 -125801606 - MSTD LTR MaLR 0 396 164 1191 149 0 6 chr10 19787683 19787857 -125801431 + AluSx SINE Alu 2 174 -138 371 195 12 0 chr10 19787964 19788046 -125801242 + Tigger4(Zombi) DNA MER2_type 2608 2690 -41 1327 211 78 24 chr10 19788059 19788433 -125800855 - L1MB7 LINE L1 -291 5893 5500 26 0 0 0 chr10 19788436 19788462 -125800826 + AT_rich Low_complexity Low_complexity 1 26 0 1966 128 0 30 chr10 19788464 19788760 -125800528 + AluSx SINE Alu 1 287 -25 1987 119 42 0 chr10 19789123 19789409 -125799879 + AluSg SINE Alu 1 298 -12 27 29 0 0 chr10 19789582 19789616 -125799672 + AT_rich Low_complexity Low_complexity 1 34 0 1290 141 5 14 chr10 19790148 19790361 -125798927 - AluJb SINE Alu -16 296 86 305 346 98 8 chr10 19791367 19791500 -125797788 - MIR3 SINE MIR -36 172 28 2013 153 0 13 chr10 19791751 19792064 -125797224 + AluSx SINE Alu 1 309 -3 1055 257 22 4 chr10 19792834 19793060 -125796228 + MIR SINE MIR 23 252 -10 1242 109 0 6 chr10 19793145 19793320 -125795968 - AluSg/x SINE Alu -2 308 135 1341 150 85 65 chr10 19793925 19794218 -125795070 - AluJo SINE Alu -3 299 1 773 137 12 12 chr10 19794824 19794985 -125794303 + CT-rich Low_complexity Low_complexity 4 164 0 6931 41 3 0 chr10 19795091 19795943 -125793345 + L1PA4 LINE L1 5298 6152 -3 979 116 0 12 chr10 19795960 19796124 -125793164 + L1MA1 LINE L1 6141 6302 0 1041 233 105 102 chr10 19796141 19797132 -125792156 + MER31-int LTR ERV1 1377 2370 -2566 453 203 0 0 chr10 19797158 19797237 -125792051 - FRAM/FAM SINE Alu -98 78 1 1631 160 7 14 chr10 19797558 19797833 -125791455 - AluJb SINE Alu -13 299 27 1540 89 0 246 chr10 19797936 19798331 -125790957 - AluSq SINE Alu -15 298 1 2171 184 20 13 chr10 19798351 19798856 -125790432 - L1MC/D LINE L1 -633 5700 5185 1961 160 7 0 chr10 19798878 19799172 -125790116 - AluSx SINE Alu -16 296 1 694 201 0 30 chr10 19799203 19799337 -125789951 + FLAM_C SINE Alu 2 131 -12 300 91 0 0 chr10 19799403 19799447 -125789841 + (TG)n Simple_repeat Simple_repeat 1 44 0 2149 242 136 36 chr10 19799500 19800463 -125788825 - L1MC4a LINE L1 0 7808 6750 207 333 0 0 chr10 19800479 19800545 -125788743 + (TATATG)n Simple_repeat Simple_repeat 4 69 0 414 200 0 0 chr10 19800556 19800636 -125788652 - Tigger7 DNA MER2_type -7 2580 2501 378 222 0 48 chr10 19800653 19800842 -125788446 + (TA)n Simple_repeat Simple_repeat 1 180 0 323 201 14 42 chr10 19800895 19801039 -125788249 - Tigger7 DNA MER2_type -82 2505 2366 679 249 111 82 chr10 19801320 19801755 -125787533 + HAL1b LINE L1 352 806 -542 861 160 0 0 chr10 19801755 19801886 -125787402 + FLAM_C SINE Alu 1 131 -2 679 249 111 82 chr10 19801886 19801984 -125787304 + HAL1b LINE L1 806 900 -448 2183 110 10 7 chr10 19801988 19802288 -125787000 + AluSg SINE Alu 1 301 -9 264 198 0 62 chr10 19802454 19802477 -125786811 + CT-rich Low_complexity Low_complexity 3 26 -52 2101 119 0 0 chr10 19802477 19802755 -125786533 - AluSx SINE Alu -34 278 1 264 198 0 62 chr10 19802755 19802812 -125786476 + CT-rich Low_complexity Low_complexity 26 78 0 26 0 0 0 chr10 19803274 19803300 -125785988 + AT_rich Low_complexity Low_complexity 1 26 0 433 228 13 0 chr10 19804183 19804262 -125785026 + Tigger3b DNA MER2_type 1 80 -1151 1979 110 0 0 chr10 19804263 19804527 -125784761 + AluSq SINE Alu 1 264 -49 511 108 0 0 chr10 19804540 19804614 -125784674 + Alu SINE Alu 238 311 -1 3900 143 62 16 chr10 19804630 19805130 -125784158 + Tigger3b DNA MER2_type 65 610 -2418 1846 138 19 44 chr10 19805130 19805449 -125783839 + AluSx SINE Alu 1 311 -1 3900 143 62 16 chr10 19805449 19805680 -125783608 + Tigger3b DNA MER2_type 610 829 -402 502 260 130 0 chr10 19806292 19806492 -125782796 - MLT1J2 LTR MaLR -209 241 16 1180 259 65 24 chr10 19806493 19806829 -125782459 - L1ME1 LINE L1 -25 6141 5792 1879 219 43 36 chr10 19806829 19807196 -125782092 + L1ME LINE L1 5094 5454 -712 1772 102 4 20 chr10 19807196 19807450 -125781838 - AluSq SINE Alu -9 304 55 1879 219 43 36 chr10 19807450 19807772 -125781516 + L1ME LINE L1 5454 5772 -394 6237 119 28 6 chr10 19809941 19810913 -125778375 - L1PA15 LINE L1 0 6165 5162 231 36 0 0 chr10 19810913 19810941 -125778347 + (TTG)n Simple_repeat Simple_repeat 3 30 0 6237 119 28 6 chr10 19810941 19811000 -125778288 - L1PA15 LINE L1 -1003 5162 5106 653 176 0 19 chr10 19811745 19811853 -125777435 + AluJo/FLAM SINE Alu 16 121 -191 2084 139 3 0 chr10 19811853 19812147 -125777141 - AluSx SINE Alu -17 295 1 23 33 0 0 chr10 19812148 19812178 -125777110 + AT_rich Low_complexity Low_complexity 1 30 0 301 265 128 0 chr10 19813199 19813301 -125775987 + L1MC4 LINE L1 6591 6705 -1337 1705 185 0 20 chr10 19814450 19814753 -125774535 + AluJb SINE Alu 1 297 -15 2161 115 10 0 chr10 19815477 19815773 -125773515 + AluSq SINE Alu 1 299 -14 335 83 0 21 chr10 19815938 19815986 -125773302 + AluSp SINE Alu 1 47 -255 22 0 0 0 chr10 19816323 19816345 -125772943 + AT_rich Low_complexity Low_complexity 1 22 0 1967 116 30 30 chr10 19816513 19816814 -125772474 + AluSg SINE Alu 1 301 -9 353 85 0 0 chr10 19817441 19817488 -125771800 - MADE1 DNA Mariner 0 80 34 1863 100 35 4 chr10 19817488 19817747 -125771541 + AluSp SINE Alu 34 300 -13 1909 153 33 3 chr10 19817854 19818154 -125771134 + AluJb SINE Alu 1 309 -3 249 304 71 77 chr10 19818470 19818638 -125770650 + MIR SINE MIR 3 169 -93 23 33 0 0 chr10 19818820 19818850 -125770438 + AT_rich Low_complexity Low_complexity 1 30 0 1714 153 29 73 chr10 19819670 19819872 -125769416 - MER2 DNA MER2_type -16 329 147 2018 114 47 3 chr10 19819872 19820170 -125769118 + AluSq SINE Alu 1 311 -2 1714 153 29 73 chr10 19820170 19820308 -125768980 - MER2 DNA MER2_type -198 147 4 2098 136 3 3 chr10 19821127 19821428 -125767860 - AluSx SINE Alu -11 301 1 1022 236 124 4 chr10 19821431 19821706 -125767582 + MLT1B LTR MaLR 83 390 0 958 134 0 0 chr10 19821985 19822119 -125767169 + AluSg/x SINE Alu 155 288 -24 1269 142 13 36 chr10 19822129 19822462 -125766826 + LTR54 LTR ERV1 96 481 -29 2039 131 0 0 chr10 19822462 19822760 -125766528 + AluY SINE Alu 1 298 -13 1269 142 13 36 chr10 19822760 19822790 -125766498 + LTR54 LTR ERV1 481 510 0 963 258 38 30 chr10 19822804 19823071 -125766217 + MER31-int LTR ERV1 1916 2184 -4147 664 92 0 0 chr10 19823297 19823384 -125765904 + AluSg/x SINE Alu 214 300 -9 1982 125 46 0 chr10 19823636 19823917 -125765371 + AluSg SINE Alu 1 294 -16 286 297 0 27 chr10 19823929 19824003 -125765285 + MER31-int LTR ERV1 3124 3195 -4342 251 333 51 92 chr10 19824002 19824197 -125765091 + MER31-int LTR ERV1 2355 2541 -3790 * 656 222 5 69 chr10 19824298 19824514 -125764774 + MER31-int LTR ERV1 648 849 -6688 308 218 35 46 chr10 19824589 19824666 -125764622 + MER31-int LTR ERV1 2827 2904 -3359 2419 109 0 0 chr10 19824666 19824978 -125764310 + AluSx SINE Alu 1 312 0 418 104 59 32 chr10 19824980 19825073 -125764215 + MER31-int LTR ERV1 1290 1379 -3557 610 108 81 0 chr10 19825074 19825185 -125764103 + L1MA1 LINE L1 6009 6128 -174 * 5288 41 2 0 chr10 19825182 19825822 -125763466 + L1P LINE L1 4576 5216 -930 1105 123 0 22 chr10 19826079 19826258 -125763030 + AluSg/x SINE Alu 135 309 -1 1003 264 22 4 chr10 19826339 19826566 -125762722 - MIR SINE MIR -10 252 22 249 33 0 0 chr10 19827402 19827432 -125761856 + (CA)n Simple_repeat Simple_repeat 2 31 0 338 311 19 0 chr10 19828053 19828156 -125761132 + MIR SINE MIR 127 231 -31 2571 120 92 5 chr10 19828174 19828566 -125760722 - MSTA LTR MaLR 0 428 3 332 325 42 78 chr10 19829651 19830060 -125759228 + L2 LINE L2 2863 3256 -16 1949 158 191 8 chr10 19831238 19831600 -125757688 - MSTA LTR MaLR 0 428 1 2190 128 3 0 chr10 19832270 19832576 -125756712 - AluSx SINE Alu -5 307 1 2056 241 54 56 chr10 19832724 19833318 -125755970 - MLT1E LTR MaLR 0 593 1 2102 113 26 19 chr10 19833569 19833878 -125755410 + AluSx SINE Alu 1 311 -1 823 298 51 28 chr10 19834133 19834522 -125754766 - MLT1I LTR MaLR -8 401 4 2353 46 0 7 chr10 19834563 19834871 -125754417 + AluY SINE Alu 1 306 0 2270 100 3 25 chr10 19834969 19835288 -125754000 + AluSx SINE Alu 1 312 0 238 268 306 0 chr10 19835335 19835492 -125753796 + L2 LINE L2 3037 3241 -72 533 186 207 7 chr10 19836156 19836296 -125752992 + MSTD LTR MaLR 10 177 -219 667 154 9 0 chr10 19836310 19836420 -125752868 - Alu SINE Alu 0 310 200 22 0 0 0 chr10 19837166 19837188 -125752100 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr10 19838003 19838024 -125751264 + AT_rich Low_complexity Low_complexity 1 21 0 228 35 0 0 chr10 19838024 19838053 -125751235 + (CA)n Simple_repeat Simple_repeat 2 30 0 1627 133 117 0 chr10 19838055 19838311 -125750977 - AluSq SINE Alu -27 286 1 2130 114 3 3 chr10 19839080 19839378 -125749910 - AluSg SINE Alu -12 298 1 30 0 0 0 chr10 19839417 19839447 -125749841 + AT_rich Low_complexity Low_complexity 1 30 0 35 0 0 0 chr10 19839671 19839706 -125749582 + AT_rich Low_complexity Low_complexity 1 35 0 2195 95 0 13 chr10 19840020 19840325 -125748963 + AluY SINE Alu 1 301 -10 1953 125 10 20 chr10 19840639 19840942 -125748346 + AluSx SINE Alu 1 300 -12 1475 170 82 0 chr10 19841495 19841777 -125747511 - AluSx SINE Alu -2 310 6 186 103 0 0 chr10 19841946 19841975 -125747313 + (TCC)n Simple_repeat Simple_repeat 2 30 0 1191 193 83 15 chr10 19842001 19842266 -125747022 - AluJo SINE Alu -19 283 1 1359 130 5 14 chr10 19842914 19843129 -125746159 + AluJb SINE Alu 86 298 -14 190 154 77 0 chr10 19843582 19843621 -125745667 - MIR SINE MIR -4 258 217 252 271 151 60 chr10 19844091 19844257 -125745031 + MIR SINE MIR 69 249 -13 1974 125 42 0 chr10 19846055 19846344 -125742944 - AluSx SINE Alu -11 301 1 237 290 240 0 chr10 19846650 19846750 -125742538 + L2 LINE L2 3190 3313 0 2240 104 0 3 chr10 19846861 19847158 -125742130 - AluSx SINE Alu -16 296 1 467 214 73 90 chr10 19847350 19847584 -125741704 + MER106A DNA MER1_type 7 236 0 1127 92 0 0 chr10 19847605 19847747 -125741541 - AluSx SINE Alu -36 274 133 1979 126 30 7 chr10 19848086 19848387 -125740901 + AluSg SINE Alu 1 308 -2 431 333 154 0 chr10 19848760 19848961 -125740327 + MIR SINE MIR 31 262 0 855 131 25 0 chr10 19849845 19849967 -125739321 - AluSx SINE Alu -188 125 1 195 100 0 0 chr10 19850130 19850160 -125739128 + (TCC)n Simple_repeat Simple_repeat 2 31 0 1250 170 87 19 chr10 19850186 19850451 -125738837 - AluJo SINE Alu -29 283 1 2271 105 0 0 chr10 19851552 19851858 -125737430 - AluSg1 SINE Alu -3 306 1 287 249 173 94 chr10 19851859 19852085 -125737203 - L1ME3A LINE L1 -222 5948 5694 30 0 0 0 chr10 19852290 19852320 -125736968 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr10 19855203 19855224 -125734064 + AT_rich Low_complexity Low_complexity 1 21 0 23 78 0 0 chr10 19855854 19855905 -125733383 + AT_rich Low_complexity Low_complexity 1 51 0 1465 98 29 98 chr10 19856844 19856988 -125732300 - Tigger4(Zombi) DNA MER2_type -202 2529 2377 2313 114 0 0 chr10 19856988 19857296 -125731992 - AluSx SINE Alu -4 308 1 1465 98 29 98 chr10 19857296 19857309 -125731979 - Tigger4(Zombi) DNA MER2_type -354 2377 2365 2619 39 0 13 chr10 19857309 19857617 -125731671 - AluY SINE Alu -7 304 1 1465 98 29 98 chr10 19857617 19857774 -125731514 - Tigger4(Zombi) DNA MER2_type -366 2365 2236 659 164 100 0 chr10 19857780 19857920 -125731368 - Tigger4(Zombi) DNA MER2_type -2570 161 8 814 198 139 4 chr10 19857928 19858166 -125731122 + L1MB7 LINE L1 5914 6183 -1 654 196 125 22 chr10 19858920 19859104 -125730184 + MER63A DNA MER1_type 1 203 -7 1519 210 10 3 chr10 19860094 19860385 -125728903 - AluJo SINE Alu -19 293 1 1781 170 0 26 chr10 19860498 19860809 -125728479 + AluJb SINE Alu 1 303 -9 258 268 62 77 chr10 19860970 19861242 -125728046 + L1ME4a LINE L1 5750 6017 -104 727 205 92 20 chr10 19861413 19861608 -125727680 - L1ME2 LINE L1 -13 6151 5943 566 259 88 29 chr10 19861997 19862398 -125726890 - L1MC4a LINE L1 -630 5540 5480 2103 122 0 7 chr10 19862657 19862961 -125726327 - AluSg SINE Alu -8 302 1 778 171 14 7 chr10 19863036 19863060 -125726228 - AluJo SINE Alu -171 141 119 194 0 39 0 chr10 19863060 19863086 -125726202 + (TTTG)n Simple_repeat Simple_repeat 1 27 0 778 171 14 7 chr10 19863086 19863201 -125726087 - AluJo SINE Alu -193 119 1 207 0 0 0 chr10 19863203 19863226 -125726062 + (T)n Simple_repeat Simple_repeat 1 23 0 718 252 13 30 chr10 19863411 19863641 -125725647 - HAL1b LINE L1 -773 575 350 2133 120 7 3 chr10 19863704 19864013 -125725275 - AluSx SINE Alu -2 310 1 423 275 109 31 chr10 19864304 19864653 -125724635 - L1MC4a LINE L1 -1911 5897 5522 1639 127 0 0 chr10 19864911 19865147 -125724141 + AluSx SINE Alu 1 236 -76 1544 202 7 3 chr10 19865247 19865534 -125723754 - AluJb SINE Alu -19 293 6 26 30 0 0 chr10 19865714 19865747 -125723541 + AT_rich Low_complexity Low_complexity 1 33 0 2319 104 0 0 chr10 19866014 19866323 -125722965 - AluSc SINE Alu 0 309 1 636 142 18 0 chr10 19867133 19867246 -125722042 + FLAM_C SINE Alu 1 115 -18 207 167 0 0 chr10 19867288 19867330 -125721958 + (TGAA)n Simple_repeat Simple_repeat 3 44 0 2109 119 0 3 chr10 19869258 19869560 -125719728 - AluSx SINE Alu -10 302 2 268 312 54 57 chr10 19870155 19870439 -125718849 - L2 LINE L2 -264 3008 2737 334 204 175 39 chr10 19870569 19870672 -125718616 + MER5B DNA MER1_type 62 178 0 2324 101 3 22 chr10 19871097 19871415 -125717873 - AluSx SINE Alu 0 312 1 22 35 0 0 chr10 19871425 19871454 -125717834 + AT_rich Low_complexity Low_complexity 1 29 0 1707 146 27 0 chr10 19871454 19871714 -125717574 - AluSx SINE Alu -45 267 1 2434 70 0 3 chr10 19871959 19872261 -125717027 - AluY SINE Alu -10 301 1 1713 175 4 0 chr10 19872385 19872665 -125716623 - AluSg SINE Alu -29 281 1 657 252 0 0 chr10 19872673 19872800 -125716488 - FLAM_C SINE Alu -6 127 1 2382 94 0 3 chr10 19872843 19873151 -125716137 - AluY SINE Alu -4 307 1 989 142 47 0 chr10 19873605 19873753 -125715535 + AluJb SINE Alu 135 289 -23 865 211 76 87 chr10 19874841 19874949 -125714339 + MER39 LTR ERV1 228 336 -317 2206 135 0 0 chr10 19874949 19875253 -125714035 + AluSx SINE Alu 1 304 -8 865 211 76 87 chr10 19875253 19875617 -125713671 + MER39 LTR ERV1 336 653 0 1783 178 14 0 chr10 19875743 19876024 -125713264 + AluJo SINE Alu 1 285 -27 1065 139 18 0 chr10 19876025 19876191 -125713097 + AluSg/x SINE Alu 133 301 -11 615 332 61 40 chr10 19876191 19876690 -125712598 - L2 LINE L2 -18 3295 2778 2089 111 44 0 chr10 19876690 19876988 -125712300 - AluSq SINE Alu -2 311 1 615 332 61 40 chr10 19876988 19877132 -125712156 - L2 LINE L2 -535 2778 2638 1841 169 10 3 chr10 19877992 19878293 -125710995 - AluJo SINE Alu -9 303 1 1963 140 0 0 chr10 19879524 19879810 -125709478 - AluJb SINE Alu -26 286 1 192 315 19 0 chr10 19879831 19879885 -125709403 - L2 LINE L2 -558 2756 2702 21 36 0 0 chr10 19880525 19880553 -125708735 + AT_rich Low_complexity Low_complexity 1 28 0 292 250 12 24 chr10 19880980 19881064 -125708224 + Tigger7 DNA MER2_type 3 85 -254 276 100 0 0 chr10 19881107 19881147 -125708141 + (GGGAGA)n Simple_repeat Simple_repeat 4 43 0 1910 130 11 7 chr10 19881210 19881494 -125707794 + AluSx SINE Alu 3 287 -25 21 0 0 0 chr10 19881495 19881516 -125707772 + AT_rich Low_complexity Low_complexity 1 21 0 460 179 0 43 chr10 19882283 19882423 -125706865 + Tigger7 DNA MER2_type 2366 2499 -88 223 232 18 18 chr10 19882423 19882479 -125706809 + (TATATG)n Simple_repeat Simple_repeat 5 60 0 567 175 0 48 chr10 19882479 19882668 -125706620 + (TA)n Simple_repeat Simple_repeat 1 180 0 518 148 0 0 chr10 19882683 19882764 -125706524 + Tigger7 DNA MER2_type 2401 2481 -6 580 177 38 118 chr10 19882856 19883042 -125706246 + L1MD3 LINE L1 6800 6970 -1025 208 360 93 14 chr10 19883056 19883195 -125706093 - L2 LINE L2 -1452 1862 1713 22 0 0 0 chr10 19885151 19885173 -125704115 + AT_rich Low_complexity Low_complexity 1 22 0 436 241 38 0 chr10 19887555 19887586 -125701702 - L1MA10 LINE L1 -21 6313 6283 437 279 32 19 chr10 19887586 19887744 -125701544 - L1ME1 LINE L1 -45 6121 5962 885 229 188 17 chr10 19887780 19888073 -125701215 - MLT1D LTR MaLR -117 388 46 1400 164 13 8 chr10 19888144 19888382 -125700906 - AluJb SINE Alu -73 239 1 564 167 28 28 chr10 19888759 19888867 -125700421 - AluSx SINE Alu -85 227 120 580 40 0 0 chr10 19888874 19888948 -125700340 - AluSx SINE Alu -239 74 1 3307 125 105 66 chr10 19889718 19890383 -125698905 + LTR8 LTR ERV1 1 691 0 888 230 17 6 chr10 19890937 19891111 -125698177 + MER5A DNA MER1_type 14 189 0 2241 103 3 3 chr10 19891463 19891765 -125697523 - AluSx SINE Alu -10 302 1 2241 112 7 0 chr10 19891983 19892287 -125697001 - AluSq SINE Alu -5 308 3 2425 177 52 14 chr10 19892291 19892787 -125696501 - L1MC1 LINE L1 -5 6328 5814 277 214 14 0 chr10 19892831 19892901 -125696387 - L1ME3A LINE L1 -15 6155 6085 403 264 112 28 chr10 19893488 19893666 -125695622 + MLT1J2 LTR MaLR 254 446 -4 226 274 78 30 chr10 19893954 19894224 -125695064 - L1MEd LINE L1 -3653 2729 2447 1179 248 18 16 chr10 19894345 19894728 -125694560 + L1ME1 LINE L1 4769 5152 -994 2071 108 50 0 chr10 19894731 19895009 -125694279 - AluSp SINE Alu -21 292 1 1717 251 134 14 chr10 19895012 19895802 -125693486 + L1ME1 LINE L1 5277 6161 -5 292 328 56 7 chr10 19895869 19896153 -125693135 - L1MEd LINE L1 -4814 1570 1273 371 279 64 47 chr10 19896292 19896464 -125692824 - L1MEd LINE L1 -5934 438 264 26 0 0 0 chr10 19896517 19896543 -125692745 + AT_rich Low_complexity Low_complexity 1 26 0 32 26 0 0 chr10 19897295 19897334 -125691954 + AT_rich Low_complexity Low_complexity 1 39 0 326 41 0 41 chr10 19898589 19898638 -125690650 + (TCCCC)n Simple_repeat Simple_repeat 5 51 0 2080 121 0 0 chr10 19898640 19898920 -125690368 - AluSx SINE Alu -32 280 1 2021 148 0 7 chr10 19899043 19899340 -125689948 - AluSx SINE Alu -17 295 1 29 28 0 0 chr10 19899599 19899635 -125689653 + AT_rich Low_complexity Low_complexity 1 36 0 28 0 0 0 chr10 19900090 19900118 -125689170 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr10 19900415 19900445 -125688843 + AT_rich Low_complexity Low_complexity 1 30 0 1258 289 131 38 chr10 19900489 19900543 -125688745 + L2 LINE L2 1945 1993 -1321 2373 93 3 0 chr10 19900543 19900845 -125688443 - AluSp SINE Alu -10 303 1 1258 289 131 38 chr10 19900845 19901143 -125688145 + L2 LINE L2 1993 2262 -1052 2159 120 0 29 chr10 19901143 19901451 -125687837 - AluSx SINE Alu -13 299 1 1258 289 131 38 chr10 19901451 19901723 -125687565 + L2 LINE L2 2262 2628 -686 667 309 138 13 chr10 19901723 19902115 -125687173 - MLT1J2 LTR MaLR 0 450 10 1247 263 48 103 chr10 19902117 19902195 -125687093 + L2 LINE L2 2691 2772 -541 188 0 74 0 chr10 19902195 19902222 -125687066 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1247 263 48 103 chr10 19902222 19902348 -125686940 + L2 LINE L2 2772 2903 -410 3379 96 4 0 chr10 19902348 19902837 -125686451 - L1MA2 LINE L1 0 6304 5814 1247 263 48 103 chr10 19902837 19903064 -125686224 + L2 LINE L2 2903 3077 -236 2186 118 3 0 chr10 19903064 19903361 -125685927 - AluSq SINE Alu -15 298 1 1247 263 48 103 chr10 19903361 19903566 -125685722 + L2 LINE L2 3077 3292 -21 1947 164 90 81 chr10 19904208 19904739 -125684549 + LTR10A LTR ERV1 13 548 -61 478 68 0 68 chr10 19904819 19904861 -125684427 - THE1B LTR MaLR -295 69 33 2437 203 25 61 chr10 19904861 19905496 -125683792 + LTR9 LTR ERV1 1 612 0 478 68 0 68 chr10 19905496 19905527 -125683761 - THE1B LTR MaLR -331 33 1 309 284 344 5 chr10 19905623 19905841 -125683447 + MLT1H LTR MaLR 258 549 0 2054 158 0 0 chr10 19906923 19907233 -125682055 - AluSx SINE Alu -2 310 1 941 129 0 0 chr10 19907236 19907368 -125681920 - AluSq/x SINE Alu -180 132 1 2022 152 0 7 chr10 19908183 19908492 -125680796 - AluJb SINE Alu -5 307 1 279 188 125 62 chr10 19908798 19908878 -125680410 + L2 LINE L2 3227 3311 -2 289 254 0 0 chr10 19908900 19908959 -125680329 - L2 LINE L2 -17 3255 3197 2020 138 3 28 chr10 19909103 19909423 -125679865 - AluSq SINE Alu -1 312 1 909 336 65 18 chr10 19910093 19910551 -125678737 + L2 LINE L2 1713 2192 -1122 233 146 21 0 chr10 19910571 19910619 -125678669 + L1MB7 LINE L1 6132 6180 -4 2913 90 12 117 chr10 19910702 19911061 -125678227 - L1PB1 LINE L1 0 6151 5756 192 77 0 0 chr10 19911061 19911087 -125678201 + (TA)n Simple_repeat Simple_repeat 2 27 0 2913 90 12 117 chr10 19911087 19911254 -125678034 - L1PB1 LINE L1 -395 5756 5693 186 43 0 0 chr10 19911254 19911277 -125678011 + (TCTA)n Simple_repeat Simple_repeat 4 26 0 2913 90 12 117 chr10 19911277 19911347 -125677941 - L1PB1 LINE L1 -458 5693 5617 879 340 110 26 chr10 19911352 19911920 -125677368 + L2 LINE L2 2470 3140 -173 3334 132 13 17 chr10 19911920 19912449 -125676839 - MER1A DNA MER1_type 0 527 1 879 340 110 26 chr10 19912449 19912639 -125676649 + L2 LINE L2 3140 3313 0 24 0 0 0 chr10 19913370 19913394 -125675894 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr10 19913434 19913456 -125675832 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr10 19913578 19913602 -125675686 + AT_rich Low_complexity Low_complexity 1 24 0 32 43 0 0 chr10 19913811 19913857 -125675431 + AT_rich Low_complexity Low_complexity 1 46 0 2090 114 0 23 chr10 19914043 19914350 -125674938 - AluSg SINE Alu -10 300 1 1441 297 101 26 chr10 19915384 19916377 -125672911 - L2 LINE L2 0 3313 2238 1906 142 44 25 chr10 19916410 19916777 -125672511 + THE1C LTR MaLR 1 374 -1 495 277 173 12 chr10 19917168 19917417 -125671871 - L2 LINE L2 0 3313 3025 1701 182 3 10 chr10 19917971 19918273 -125671015 - AluJo SINE Alu -12 300 1 779 148 49 0 chr10 19918480 19918622 -125670666 - L1MA3 LINE L1 0 6305 6157 2124 99 44 10 chr10 19918651 19918945 -125670343 + AluSq SINE Alu 1 304 -9 386 285 87 50 chr10 19919115 19919357 -125669931 + MIR SINE MIR 4 254 -8 4589 188 50 16 chr10 19919834 19921461 -125667827 - L1MB3 LINE L1 -2 6181 4488 2463 112 22 0 chr10 19921461 19921817 -125667471 - THE1B LTR MaLR 0 364 1 4589 188 50 16 chr10 19921817 19921999 -125667289 - L1MB3 LINE L1 -1695 4488 4314 1970 155 0 7 chr10 19922290 19922586 -125666702 - AluSx SINE Alu -18 294 1 2182 97 0 3 chr10 19922650 19922940 -125666348 - AluSq SINE Alu -24 289 1 243 394 39 0 chr10 19922972 19923076 -125666212 + MIR SINE MIR 52 159 -103 2025 140 0 10 chr10 19924278 19924586 -125664702 + AluSx SINE Alu 1 305 -7 206 309 145 65 chr10 19925769 19926170 -125663118 - L2 LINE L2 -337 2977 2545 365 49 18 35 chr10 19926183 19926243 -125663045 + AluJb SINE Alu 87 139 -163 376 221 74 156 chr10 19926283 19926527 -125662761 - MIR SINE MIR -21 241 18 866 252 116 26 chr10 19928398 19928855 -125660433 - L1ME4a LINE L1 -5 6116 5619 4050 166 20 4 chr10 19928874 19929574 -125659714 + MER50 LTR ERV1 1 711 -23 620 183 14 114 chr10 19929631 19929850 -125659438 - L1MB7 LINE L1 -66 6118 5922 1727 243 50 38 chr10 19929949 19930447 -125658841 + MLT1F LTR MaLR 38 541 -1 1167 265 121 44 chr10 19930844 19931419 -125657869 + MLT1G LTR MaLR 1 590 0 225 101 89 30 chr10 19931655 19931824 -125657464 + (TA)n Simple_repeat Simple_repeat 2 180 0 24 0 0 0 chr10 19931916 19931940 -125657348 + AT_rich Low_complexity Low_complexity 1 24 0 2184 175 40 52 chr10 19931940 19932386 -125656902 - MLT2B2 LTR ERVL -74 441 1 410 315 112 39 chr10 19932489 19932775 -125656513 - L2 LINE L2 -2 3311 3005 5204 139 14 13 chr10 19934311 19936278 -125653010 - L1PA15 LINE L1 -4 6161 4111 21 36 0 0 chr10 19936457 19936485 -125652803 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr10 19937391 19937414 -125651874 + AT_rich Low_complexity Low_complexity 1 23 0 229 229 0 16 chr10 19938031 19938092 -125651196 - LTR66 LTR ERVL -157 453 394 337 282 92 43 chr10 19938831 19938994 -125650294 + MIR3 SINE MIR 21 191 -17 228 35 0 0 chr10 19939246 19939275 -125650013 + (TTCTC)n Simple_repeat Simple_repeat 4 32 0 2258 116 0 0 chr10 19939275 19939585 -125649703 - AluSx SINE Alu -2 310 1 334 287 148 0 chr10 19939657 19939779 -125649509 - MER5A DNA MER1_type -1 188 49 2432 76 0 10 chr10 19939911 19940214 -125649074 - AluY SINE Alu -11 300 1 2329 97 57 14 chr10 19941235 19941584 -125647704 + THE1B LTR MaLR 1 364 0 275 354 30 30 chr10 19941674 19941838 -125647450 + MER5A DNA MER1_type 24 187 -2 859 199 5 0 chr10 19942233 19942429 -125646859 - L1 LINE L1 -1648 4498 4302 4309 128 15 0 chr10 19942429 19943078 -125646210 + L1PA16 LINE L1 5497 6157 -9 329 258 188 23 chr10 19943091 19943219 -125646069 + MER5B DNA MER1_type 29 177 -1 1817 145 52 55 chr10 19943748 19944113 -125645175 - THE1B LTR MaLR 0 364 1 224 324 127 70 chr10 19944127 19944269 -125645019 - L2 LINE L2 0 3272 3123 278 327 25 25 chr10 19944414 19944576 -125644712 - L2 LINE L2 -182 3090 2929 2354 97 0 13 chr10 19944661 19944972 -125644316 - AluY SINE Alu -4 307 1 23 68 0 0 chr10 19946814 19946858 -125642430 + AT_rich Low_complexity Low_complexity 1 44 0 631 294 71 5 chr10 19947043 19947254 -125642034 + L1PA16 LINE L1 2 226 -6561 1151 261 60 23 chr10 19947547 19947945 -125641343 + L1PA16 LINE L1 1267 1679 -5108 14519 223 26 18 chr10 19947959 19949635 -125639653 + L1PA16 LINE L1 1996 3657 -3160 2411 65 0 10 chr10 19949635 19949927 -125639361 + AluY SINE Alu 3 291 -20 14519 223 26 18 chr10 19949927 19953040 -125636248 + L1PA16 LINE L1 3657 6817 0 3068 194 36 58 chr10 19953156 19953951 -125635337 - L1MB8 LINE L1 -5 6173 5396 23 68 0 0 chr10 19953976 19954020 -125635268 + AT_rich Low_complexity Low_complexity 1 44 0 808 146 0 31 chr10 19955280 19955410 -125633878 - FLAM_C SINE Alu -7 126 1 872 250 97 38 chr10 19955859 19955917 -125633371 + MER45C DNA AcHobo 1 54 -899 1670 186 30 19 chr10 19955917 19956288 -125633000 - THE1C LTR MaLR 0 375 1 872 250 97 38 chr10 19956288 19956517 -125632771 + MER45C DNA AcHobo 54 305 -648 458 143 161 143 chr10 19956563 19956582 -125632706 + MER45C DNA AcHobo 783 800 -781 216 0 0 0 chr10 19956582 19956606 -125632682 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 458 143 161 143 chr10 19956606 19956754 -125632534 + MER45C DNA AcHobo 800 953 0 23 0 0 0 chr10 19957001 19957024 -125632264 + AT_rich Low_complexity Low_complexity 1 23 0 1691 197 27 0 chr10 19958622 19958922 -125630366 - AluJb SINE Alu -4 308 1 208 176 59 0 chr10 19958967 19959018 -125630270 + (TCTA)n Simple_repeat Simple_repeat 4 57 0 180 0 0 0 chr10 19959140 19959160 -125630128 + (GAAAA)n Simple_repeat Simple_repeat 2 21 0 22 35 0 0 chr10 19959290 19959319 -125629969 + AT_rich Low_complexity Low_complexity 1 29 0 1650 177 33 10 chr10 19960549 19960854 -125628434 + AluJo SINE Alu 1 312 0 663 111 0 0 chr10 19962206 19962296 -125626992 + AluSg/x SINE Alu 208 297 -15 616 227 7 0 chr10 19962363 19962504 -125626784 - L1MA10 LINE L1 -13 6321 6180 359 169 8 34 chr10 19962525 19962643 -125626645 + CT-rich Low_complexity Low_complexity 3 117 0 1529 52 0 33 chr10 19962644 19962856 -125626432 + L1PA6 LINE L1 5950 6154 0 1708 197 72 69 chr10 19963552 19964329 -125624959 - L1MC/D LINE L1 -593 5751 4991 4185 55 21 69 chr10 19964331 19965444 -125623844 - MER11A LTR ERVK -2 1264 1 444 206 9 0 chr10 19965444 19965551 -125623737 - L1MC/D LINE L1 -1150 4996 4889 5653 237 57 19 chr10 19965653 19967519 -125621769 - L1MC/D LINE L1 -1262 4884 2949 342 80 0 0 chr10 19968677 19968727 -125620561 + (TC)n Simple_repeat Simple_repeat 2 51 0 1030 162 0 0 chr10 19968730 19968884 -125620404 - AluJb SINE Alu -23 289 136 598 233 91 28 chr10 19969519 19969695 -125619593 - MER5A DNA MER1_type -1 188 2 6592 51 6 3 chr10 19970121 19971759 -125617529 + L1PA4 LINE L1 4550 6152 -3 2305 108 3 0 chr10 19972277 19972574 -125616714 + AluSx SINE Alu 1 298 -14 414 300 90 60 chr10 19972721 19973021 -125616267 + MLT1H LTR MaLR 13 321 -228 899 261 0 0 chr10 19973067 19973243 -125616045 + MER58A DNA MER1_type 1 176 -48 412 173 205 47 chr10 19973289 19973416 -125615872 + MLT1H LTR MaLR 402 548 -1 191 345 133 0 chr10 19973530 19973643 -125615645 - MIR3 SINE MIR -4 204 77 21 36 0 0 chr10 19974017 19974045 -125615243 + AT_rich Low_complexity Low_complexity 1 28 0 491 323 117 22 chr10 19974890 19975293 -125613995 - L1M4 LINE L1 -2167 3979 3539 1083 158 42 9 chr10 19975309 19975524 -125613764 - L1PA14 LINE L1 -70 6091 5870 6429 80 7 1 chr10 19975681 19976553 -125612735 - L1PA7 LINE L1 -3 6151 5275 1109 82 0 0 chr10 19976554 19976701 -125612587 + L1PA7 LINE L1 5121 5267 -879 309 279 96 29 chr10 19976856 19977064 -125612224 - L1M4 LINE L1 -778 5368 5147 249 316 102 31 chr10 19977301 19977526 -125611762 - L1M4 LINE L1 -1343 4803 4563 352 313 147 11 chr10 19978173 19978528 -125610760 - L1MC4a LINE L1 -1878 5864 5462 28 0 0 0 chr10 19978684 19978712 -125610576 + AT_rich Low_complexity Low_complexity 1 28 0 516 275 106 88 chr10 19978839 19978905 -125610383 - L1MC4a LINE L1 -1089 4991 4928 1394 202 7 37 chr10 19978905 19979202 -125610086 - AluJo SINE Alu -23 289 2 516 275 106 88 chr10 19979202 19979814 -125609474 - L1MC4a LINE L1 -1152 4928 4301 1966 144 7 3 chr10 19980751 19981050 -125608238 - AluSx SINE Alu -12 300 1 4057 125 20 14 chr10 19982038 19982728 -125606560 + L1MA5A LINE L1 5600 6293 -4 309 277 75 75 chr10 19982776 19982964 -125606324 - L1MC4a LINE L1 -5881 189 2 30 0 0 0 chr10 19983288 19983318 -125605970 + AT_rich Low_complexity Low_complexity 1 30 0 325 291 29 39 chr10 19983515 19983618 -125605670 - MER5A DNA MER1_type -19 170 69 1671 187 0 23 chr10 19984196 19984501 -125604787 - AluJb SINE Alu -14 298 1 545 260 88 28 chr10 19985073 19985254 -125604034 + MIR SINE MIR 40 231 -31 339 339 17 0 chr10 19985303 19985418 -125603870 + MER5B DNA MER1_type 3 119 -59 269 219 110 14 chr10 19986432 19986505 -125602783 + MIR SINE MIR 90 169 -93 241 127 0 48 chr10 19986525 19986588 -125602700 + (TTTTA)n Simple_repeat Simple_repeat 1 60 0 198 174 22 22 chr10 19986592 19986638 -125602650 + MIR SINE MIR 212 257 -5 2224 120 47 33 chr10 19987180 19987539 -125601749 + THE1B LTR MaLR 1 364 0 269 246 223 31 chr10 19987625 19987755 -125601533 + LTR16C LTR ERVL 100 254 -237 381 242 45 8 chr10 19987798 19987930 -125601358 + LTR16C LTR ERVL 354 490 -1 1460 215 19 25 chr10 19988045 19988408 -125600880 + MLT1A1 LTR MaLR 1 361 -4 2050 132 0 16 chr10 19988490 19988793 -125600495 + AluSx SINE Alu 1 298 -14 432 308 98 62 chr10 19989302 19989688 -125599600 - MLT1J LTR MaLR 0 511 112 27 0 0 0 chr10 19991747 19991774 -125597514 + AT_rich Low_complexity Low_complexity 1 27 0 1792 135 48 10 chr10 19992005 19992294 -125596994 - AluSg SINE Alu -10 300 1 3705 124 0 8 chr10 19992761 19993292 -125595996 - MER1A DNA MER1_type 0 527 1 260 53 26 0 chr10 19993422 19993460 -125595828 + (TA)n Simple_repeat Simple_repeat 2 40 0 282 259 0 86 chr10 19994421 19994502 -125594786 - Tigger2 DNA MER2_type 0 2718 2645 1129 162 125 88 chr10 19994511 19994783 -125594505 - AluJb SINE Alu -30 282 1 181 351 120 37 chr10 19995272 19995514 -125593774 + L3b LINE CR1 1227 1488 -95 957 254 14 0 chr10 19995562 19995782 -125593506 - MER58A DNA MER1_type -1 223 1 2095 107 10 7 chr10 19995958 19996249 -125593039 - AluSq SINE Alu -21 292 1 223 329 24 12 chr10 19996321 19996403 -125592885 + L2 LINE L2 3226 3308 -5 1549 303 58 14 chr10 19997216 19997770 -125591518 + L1MEc LINE L1 70 647 -5749 604 288 87 17 chr10 19997803 19998147 -125591141 + L1MEc LINE L1 996 1363 -5033 * 4546 246 97 40 chr10 19998128 19999392 -125589896 + L1MEc LINE L1 1740 2930 -3285 1971 149 3 0 chr10 19999392 19999688 -125589600 + AluSq SINE Alu 3 299 -14 4546 246 97 40 chr10 19999688 20000966 -125588322 + L1MEc LINE L1 2930 4399 -1816 484 191 27 27 chr10 20000964 20001074 -125588214 + L1PB4 LINE L1 6045 6154 -2 * 543 261 16 49 chr10 20001086 20001270 -125588018 + L1ME2 LINE L1 5935 6112 -52 4673 231 37 100 chr10 20001305 20003892 -125585396 - L1 LINE L1 -1537 4609 2186 2121 119 3 0 chr10 20003894 20004188 -125585100 - AluSx SINE Alu -17 295 1 215 235 0 0 chr10 20006411 20006462 -125582826 + L2 LINE L2 3190 3240 -73 1951 146 3 10 chr10 20006902 20007203 -125582085 + AluJb SINE Alu 1 299 -13 288 300 18 27 chr10 20007222 20007332 -125581956 + MER5B DNA MER1_type 1 109 -69 613 144 39 0 chr10 20007668 20007772 -125581516 + L1PB1 LINE L1 75 182 -6681 * 6267 159 9 39 chr10 20007763 20009927 -125579361 + L1PB1 LINE L1 4780 6867 0 3252 260 60 6 chr10 20010864 20012044 -125577244 - L1M4 LINE L1 -1430 4716 3473 669 145 79 13 chr10 20012021 20012173 -125577115 - L1MC3 LINE L1 -2 7783 7622 * 1457 250 68 71 chr10 20012177 20012781 -125576507 - LTR9B LTR ERV1 -36 608 7 1885 183 93 0 chr10 20012785 20013183 -125576105 - L1MC3 LINE L1 -1206 6579 6145 778 228 38 82 chr10 20013152 20013494 -125575794 - L1MCa LINE L1 -5213 1213 887 * 291 152 0 0 chr10 20013491 20013537 -125575751 - L1MDa LINE L1 -3423 3117 3072 * 1290 68 6 11 chr10 20013537 20013713 -125575575 - LTR7 LTR ERV1 -2 448 274 944 253 30 37 chr10 20013834 20014237 -125575051 - L1MDa LINE L1 -3571 2969 2570 1231 190 24 16 chr10 20014287 20014534 -125574754 - L1MB1 LINE L1 -23 6145 5897 * 1769 242 59 41 chr10 20014532 20015222 -125574066 - L1MDa LINE L1 -3950 2590 1914 2251 102 0 16 chr10 20015222 20015525 -125573763 + AluY SINE Alu 1 298 -13 1769 242 59 41 chr10 20015525 20015541 -125573747 - L1MDa LINE L1 -4626 1914 1900 1582 171 0 90 chr10 20015541 20015896 -125573392 - AluJb SINE Alu 0 312 1 1769 242 59 41 chr10 20015896 20015970 -125573318 - L1MDa LINE L1 -4640 1900 1795 1291 124 10 0 chr10 20015971 20016165 -125573123 + L1PA16 LINE L1 5859 6054 -112 186 306 50 63 chr10 20018455 20018677 -125570611 + L2 LINE L2 701 919 -2395 180 135 0 0 chr10 20019057 20019094 -125570194 + (TC)n Simple_repeat Simple_repeat 2 38 0 22 0 0 0 chr10 20019171 20019193 -125570095 + AT_rich Low_complexity Low_complexity 1 22 0 1254 162 71 12 chr10 20019332 20019585 -125569703 + AluJb SINE Alu 26 293 -19 1485 223 135 24 chr10 20021053 20021476 -125567812 + MLT1D LTR MaLR 1 479 -26 2035 114 0 0 chr10 20021476 20021787 -125567501 + AluY SINE Alu 12 322 0 1485 223 135 24 chr10 20021787 20021815 -125567473 + MLT1D LTR MaLR 479 503 -2 962 244 30 33 chr10 20021865 20022136 -125567152 + LTR46-int LTR ERV1 675 944 -4642 577 303 47 73 chr10 20022162 20022779 -125566509 + LTR46-int LTR ERV1 4242 5371 -2347 228 35 0 0 chr10 20024776 20024805 -125564483 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 972 125 0 0 chr10 20024913 20025049 -125564239 + AluSg/x SINE Alu 161 296 -16 22 0 0 0 chr10 20025468 20025490 -125563798 + AT_rich Low_complexity Low_complexity 1 22 0 216 0 0 0 chr10 20025624 20025648 -125563640 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 263 300 107 29 chr10 20025977 20026117 -125563171 + MIR SINE MIR 69 219 -43 1024 298 135 27 chr10 20026916 20027757 -125561531 - L2 LINE L2 -12 3301 2379 915 197 2 14 chr10 20027810 20027826 -125561462 - L1PB3 LINE L1 0 6151 6136 372 43 0 0 chr10 20027826 20027872 -125561416 + (TCTA)n Simple_repeat Simple_repeat 1 46 0 915 197 2 14 chr10 20027872 20028046 -125561242 - L1PB3 LINE L1 -15 6136 5964 367 211 28 0 chr10 20028087 20028196 -125561092 + (CATA)n Simple_repeat Simple_repeat 3 114 0 317 244 37 24 chr10 20028383 20028465 -125560823 - MIR SINE MIR -171 91 9 218 325 137 8 chr10 20031429 20031546 -125557742 - L2 LINE L2 -260 3053 2922 1898 155 0 7 chr10 20032593 20032897 -125556391 - AluJo SINE Alu -10 302 1 1967 176 62 36 chr10 20033700 20034086 -125555202 - MSTD LTR MaLR 0 396 1 21 0 0 0 chr10 20034314 20034335 -125554953 + AT_rich Low_complexity Low_complexity 1 21 0 916 100 0 0 chr10 20034335 20034455 -125554833 - L1MA3 LINE L1 -5 6300 6181 836 204 34 17 chr10 20036281 20036457 -125552831 + MER5A DNA MER1_type 11 189 0 813 228 28 38 chr10 20036465 20036676 -125552612 + MER3 DNA MER1_type 1 209 0 423 189 126 45 chr10 20037659 20037770 -125551518 - MIR3 SINE MIR -6 202 83 215 211 0 0 chr10 20038920 20038958 -125550330 + polypurine Low_complexity Low_complexity 3 40 0 638 129 83 76 chr10 20039382 20039514 -125549774 - FLAM_C SINE Alu 0 133 1 532 116 32 42 chr10 20039615 20039710 -125549578 - L1P LINE L1 -1552 4594 4501 1178 143 261 29 chr10 20040399 20040644 -125548644 - AluJo SINE Alu 0 302 1 1728 138 12 0 chr10 20040871 20041124 -125548164 - AluSx SINE Alu -13 299 44 434 109 62 0 chr10 20041639 20041703 -125547585 - AluJo SINE Alu -178 134 67 1746 209 63 56 chr10 20041754 20042184 -125547104 - Tigger2a DNA MER2_type 0 434 2 2314 93 0 3 chr10 20042226 20042516 -125546772 + AluY SINE Alu 1 289 -22 21 0 0 0 chr10 20043327 20043348 -125545940 + AT_rich Low_complexity Low_complexity 1 21 0 2489 85 0 0 chr10 20044244 20044550 -125544738 + AluSg SINE Alu 1 306 -4 344 179 0 0 chr10 20044562 20044618 -125544670 + AluJ/FLAM SINE Alu 2 57 -245 336 248 43 60 chr10 20044863 20044980 -125544308 + L2 LINE L2 3158 3272 0 510 58 35 11 chr10 20045997 20046084 -125543204 + (GAAA)n Simple_repeat Simple_repeat 2 90 0 1993 154 21 21 chr10 20046946 20047283 -125542005 - MER44D DNA MER2_type -2 607 1 21 0 0 0 chr10 20047386 20047407 -125541881 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 20047462 20047483 -125541805 + AT_rich Low_complexity Low_complexity 1 21 0 3033 172 4 4 chr10 20047578 20048124 -125541164 - L1P LINE L1 -1101 5045 4500 1938 157 0 0 chr10 20048795 20049094 -125540194 - AluSg SINE Alu -10 300 2 331 170 0 0 chr10 20049094 20049147 -125540141 + MER58A DNA MER1_type 172 224 0 601 290 97 13 chr10 20049316 20049554 -125539734 + MLT1L LTR MaLR 113 370 -245 1745 139 44 17 chr10 20049581 20049875 -125539413 + AluSg SINE Alu 1 302 -8 1692 150 66 4 chr10 20050689 20050963 -125538325 - AluSx SINE Alu -19 293 3 317 75 19 0 chr10 20051303 20051356 -125537932 + (TG)n Simple_repeat Simple_repeat 2 55 0 1644 43 0 0 chr10 20051386 20051573 -125537715 - L1PA6 LINE L1 0 6154 5968 2227 122 3 0 chr10 20052404 20052716 -125536572 + AluSq SINE Alu 1 313 0 1761 169 0 17 chr10 20053119 20053409 -125535879 - AluSx SINE Alu -25 287 3 301 252 208 38 chr10 20053439 20053598 -125535690 + L2 LINE L2 3123 3308 -5 2205 120 0 13 chr10 20053743 20054051 -125535237 + AluSc SINE Alu 1 304 -5 1044 191 71 0 chr10 20054242 20054452 -125534836 - MSTA LTR MaLR 0 428 204 2966 94 3 0 chr10 20054978 20055341 -125533947 - THE1B LTR MaLR 0 364 1 1557 173 17 23 chr10 20056183 20056483 -125532805 - AluJo SINE Alu -10 302 5 305 297 120 56 chr10 20057124 20057481 -125531807 + L1MEd LINE L1 676 1055 -5064 289 335 54 14 chr10 20057527 20057748 -125531540 + HAL1 LINE L1 1231 1460 -1047 3848 207 59 9 chr10 20057901 20058714 -125530574 - MER21B LTR ERV1 -5 858 5 2897 195 68 17 chr10 20058716 20059373 -125529915 + MER44D DNA MER2_type 15 705 0 473 330 94 26 chr10 20059769 20060111 -125529177 + L2 LINE L2 2026 2390 -924 185 281 75 34 chr10 20060392 20060538 -125528750 - L2 LINE L2 -722 2592 2441 612 212 0 0 chr10 20060726 20060839 -125528449 - AluJb SINE Alu -14 298 186 414 216 0 0 chr10 20060882 20060970 -125528318 + AluJ/FLAM SINE Alu 12 99 -213 2704 148 2 0 chr10 20060989 20061423 -125527865 - MER1A DNA MER1_type -36 493 59 240 227 80 0 chr10 20061732 20061807 -125527481 - LTR41 LTR ERVL -5 768 688 1890 89 0 4 chr10 20061972 20062209 -125527079 + AluSq SINE Alu 1 236 -77 207 204 0 0 chr10 20064316 20064360 -125524928 + (CATATA)n Simple_repeat Simple_repeat 4 47 0 1592 109 0 0 chr10 20065747 20065949 -125523339 - AluSc SINE Alu -107 202 1 820 228 29 29 chr10 20065952 20066268 -125523020 - L1M1 LINE L1 -3954 3611 3296 337 174 12 12 chr10 20066303 20066389 -125522899 - L1MCa LINE L1 -4403 2023 1938 * 2085 215 89 19 chr10 20066386 20067014 -125522274 + L1ME1 LINE L1 5334 6005 -161 703 154 51 0 chr10 20067456 20067573 -125521715 + FLAM_A SINE Alu 1 123 -10 30 27 0 0 chr10 20068023 20068060 -125521228 + AT_rich Low_complexity Low_complexity 1 37 0 23 0 0 0 chr10 20068624 20068647 -125520641 + AT_rich Low_complexity Low_complexity 1 23 0 37 23 0 0 chr10 20068912 20068956 -125520332 + AT_rich Low_complexity Low_complexity 1 44 0 23 0 0 0 chr10 20069281 20069304 -125519984 + AT_rich Low_complexity Low_complexity 1 23 0 2106 120 10 3 chr10 20069725 20070024 -125519264 - AluSx SINE Alu -11 301 1 806 343 32 18 chr10 20070063 20070238 -125519050 + L2 LINE L2 925 1096 -2218 4848 60 0 2 chr10 20070238 20070826 -125518462 - LTR14C LTR ERVK 0 587 1 806 343 32 18 chr10 20070826 20070988 -125518300 + L2 LINE L2 1096 1267 -2047 240 375 91 12 chr10 20071051 20071304 -125517984 - L2 LINE L2 -810 2504 2232 1396 165 131 15 chr10 20071487 20071738 -125517550 + AluJo SINE Alu 1 286 -16 351 0 0 0 chr10 20071738 20071777 -125517511 + (CAAT)n Simple_repeat Simple_repeat 2 40 0 1396 165 131 15 chr10 20071777 20071792 -125517496 + AluJo SINE Alu 286 298 -4 301 293 93 34 chr10 20071938 20072143 -125517145 - L2 LINE L2 -1400 1914 1698 246 105 0 0 chr10 20072293 20072331 -125516957 + (GA)n Simple_repeat Simple_repeat 2 39 0 253 323 189 0 chr10 20072673 20072800 -125516488 - MIR SINE MIR 0 262 112 184 256 0 0 chr10 20072978 20073017 -125516271 - MIR SINE MIR -89 119 81 612 234 136 7 chr10 20073148 20073302 -125515986 - MIR SINE MIR -65 197 24 324 179 30 0 chr10 20075087 20075154 -125514134 - L1MA10 LINE L1 -13 6321 6253 1633 199 22 49 chr10 20075642 20076049 -125513239 - MLT2B3 LTR ERVL -158 396 1 807 274 91 87 chr10 20076360 20076877 -125512411 - L2 LINE L2 -1 3312 2799 1770 144 0 8 chr10 20076877 20077141 -125512147 - AluJo SINE Alu -14 298 37 807 274 91 87 chr10 20077141 20077234 -125512054 - L2 LINE L2 -514 2799 2708 1923 138 3 20 chr10 20077234 20077530 -125511758 - AluSx SINE Alu -21 291 1 807 274 91 87 chr10 20077530 20077754 -125511534 - L2 LINE L2 -605 2708 2472 1093 223 77 21 chr10 20077974 20078301 -125510987 - MLT1C LTR MaLR -120 347 3 918 234 33 29 chr10 20078394 20078667 -125510621 - LTR40b LTR ERVL -52 410 137 180 0 0 0 chr10 20078965 20078985 -125510303 + (A)n Simple_repeat Simple_repeat 1 20 0 2060 142 0 0 chr10 20079005 20079307 -125509981 + AluSx SINE Alu 1 302 -10 267 333 28 9 chr10 20079357 20079465 -125509823 - MIR SINE MIR -147 115 6 2395 128 16 3 chr10 20080191 20080559 -125508729 + THE1C LTR MaLR 1 373 -2 902 290 86 25 chr10 20081261 20081439 -125507849 - MLT1G1 LTR MaLR 0 595 429 819 164 0 0 chr10 20081439 20081567 -125507721 - FLAM_C SINE Alu -4 129 2 902 290 86 25 chr10 20081567 20081897 -125507391 - MLT1G1 LTR MaLR -166 429 10 1681 124 0 4 chr10 20081953 20082195 -125507093 - AluSx SINE Alu -25 287 47 21 0 0 0 chr10 20082484 20082505 -125506783 + AT_rich Low_complexity Low_complexity 1 21 0 1984 160 61 27 chr10 20083414 20083919 -125505369 + MLT2A2 LTR ERVL 8 554 0 1898 152 7 3 chr10 20084262 20084552 -125504736 - AluJb SINE Alu -21 291 1 3165 90 76 0 chr10 20084987 20085474 -125503814 - L1MA3 LINE L1 -8 6297 5774 298 206 31 41 chr10 20085496 20085593 -125503695 + LTR16C LTR ERVL 366 461 -30 375 228 88 15 chr10 20086782 20086918 -125502370 - MER104 DNA Tc2 -34 146 1 558 229 0 0 chr10 20087439 20087579 -125501709 - L1MD3 LINE L1 -10 7985 7846 2228 103 7 0 chr10 20087584 20087884 -125501404 + AluSx SINE Alu 5 306 -6 15748 198 36 16 chr10 20087932 20088853 -125500435 + ERVL-D LTR ERVL 176 1077 -4687 225 0 0 0 chr10 20088853 20088878 -125500410 + (TTGG)n Simple_repeat Simple_repeat 1 25 0 15748 198 36 16 chr10 20088878 20090935 -125498353 + ERVL-D LTR ERVL 1077 3314 -2450 1462 187 39 42 chr10 20090935 20091219 -125498069 - AluJb SINE Alu -29 283 1 15748 198 36 16 chr10 20091219 20091972 -125497316 + ERVL-D LTR ERVL 3314 4051 -1713 3636 169 67 11 chr10 20091976 20092709 -125496579 + ERVL-D LTR ERVL 4969 5742 -22 364 119 15 0 chr10 20092746 20092813 -125496475 + ERVL-D LTR ERVL 5681 5748 -16 1110 210 62 80 chr10 20092822 20093174 -125496114 + MLT2D LTR ERVL 1 296 -118 369 281 0 0 chr10 20093170 20093252 -125496036 + MLT2D LTR ERVL 240 321 -93 * 261 81 0 0 chr10 20093256 20093293 -125495995 + MLT2C2 LTR ERVL 428 464 0 3343 154 31 25 chr10 20093294 20093968 -125495320 - MER67C LTR ERV1 -32 678 1 281 265 76 23 chr10 20093968 20094100 -125495188 - L1ME LINE L1 -285 5862 5724 386 85 17 0 chr10 20094115 20094174 -125495114 + (TCC)n Simple_repeat Simple_repeat 2 61 0 479 157 0 74 chr10 20094222 20094343 -125494945 + AluSg/x SINE Alu 173 284 -25 1679 103 16 119 chr10 20094603 20094915 -125494373 - AluSx SINE Alu -32 280 1 335 301 91 13 chr10 20094927 20095312 -125493976 - L1ME LINE L1 -816 5313 4899 505 286 112 4 chr10 20095725 20096001 -125493287 - L1ME LINE L1 -4918 1201 896 43 81 0 0 chr10 20096136 20096235 -125493053 + AT_rich Low_complexity Low_complexity 1 99 0 307 197 39 39 chr10 20096238 20096416 -125492872 + (TAA)n Simple_repeat Simple_repeat 3 180 0 * 337 163 26 84 chr10 20096360 20096550 -125492738 + (TTATA)n Simple_repeat Simple_repeat 2 180 0 345 298 146 7 chr10 20096572 20096723 -125492565 - L1ME LINE L1 -5339 780 609 3882 48 0 0 chr10 20096987 20097470 -125491818 - L1PA4 LINE L1 0 6155 5673 346 324 32 74 chr10 20097514 20097826 -125491462 - L1ME LINE L1 -5818 301 3 1514 112 14 14 chr10 20099081 20099296 -125489992 + AluSg/x SINE Alu 91 305 -7 592 288 27 22 chr10 20099304 20099488 -125489800 - MIR SINE MIR -24 238 54 365 380 21 0 chr10 20099983 20100125 -125489163 - MIR3 SINE MIR -11 197 53 267 286 0 0 chr10 20101192 20101269 -125488019 - L1ME LINE L1 -426 5695 5619 2156 198 128 68 chr10 20101463 20102242 -125487046 + LTR1B LTR ERV1 1 826 0 265 278 72 0 chr10 20102247 20102344 -125486944 - MIR SINE MIR -54 208 105 392 338 122 5 chr10 20103134 20103347 -125485941 - MIR SINE MIR -13 249 12 2079 123 14 0 chr10 20103950 20104242 -125485046 + AluSx SINE Alu 1 296 -16 243 0 0 0 chr10 20104609 20104636 -125484652 + (T)n Simple_repeat Simple_repeat 1 27 0 2592 51 3 3 chr10 20104821 20105137 -125484151 + AluYb8 SINE Alu 1 316 -2 198 0 0 0 chr10 20105445 20105467 -125483821 + (TTTA)n Simple_repeat Simple_repeat 1 22 0 894 108 0 0 chr10 20105467 20105587 -125483701 - AluSc SINE Alu -32 277 158 465 315 94 8 chr10 20105976 20106230 -125483058 + LTR33A LTR ERVL 227 502 -21 2029 188 53 2 chr10 20106338 20106775 -125482513 + MLT1C LTR MaLR 6 464 -3 1908 146 23 3 chr10 20106976 20107278 -125482010 + AluSx SINE Alu 3 310 -2 816 231 108 10 chr10 20107444 20107647 -125481641 - MER58A DNA MER1_type -1 223 1 6502 88 13 2 chr10 20107808 20108756 -125480532 + L1PA10 LINE L1 5210 6164 -4 825 293 64 45 chr10 20108784 20109374 -125479914 - L1ME3A LINE L1 -295 5875 5258 21 57 0 0 chr10 20109681 20109716 -125479572 + AT_rich Low_complexity Low_complexity 1 35 0 214 233 23 12 chr10 20109718 20109804 -125479484 + (TATAA)n Simple_repeat Simple_repeat 4 90 0 1407 298 56 38 chr10 20110783 20111514 -125477774 - L1ME3A LINE L1 -36 6945 6202 330 284 66 65 chr10 20111545 20113100 -125476188 - L1M4b LINE L1 -3892 3065 1359 25 0 0 0 chr10 20114036 20114061 -125475227 + AT_rich Low_complexity Low_complexity 1 25 0 300 303 120 17 chr10 20114169 20114344 -125474944 - MLT1E LTR MaLR -9 558 366 1493 177 44 6 chr10 20114481 20114798 -125474490 - L1MA9 LINE L1 0 6312 5984 337 317 0 4 chr10 20114802 20114885 -125474403 - MLT1E LTR MaLR -203 392 240 292 311 22 73 chr10 20114987 20115189 -125474099 + MLT1H1 LTR MaLR 66 224 -306 262 283 98 11 chr10 20115530 20115622 -125473666 + L2 LINE L2 3163 3262 -10 2038 43 51 0 chr10 20116027 20116283 -125473005 + AluY SINE Alu 43 311 0 296 330 0 43 chr10 20116308 20116402 -125472886 - L2 LINE L2 -15 3298 3209 2777 7 0 0 chr10 20116682 20116982 -125472306 - AluYa5 SINE Alu -11 300 1 559 208 0 0 chr10 20117155 20117251 -125472037 - MLT1E LTR MaLR -458 135 40 617 205 49 58 chr10 20117273 20117484 -125471804 + L1MA10 LINE L1 5985 6332 -2 22 0 0 0 chr10 20117696 20117718 -125471570 + AT_rich Low_complexity Low_complexity 1 22 0 383 293 160 13 chr10 20118377 20118533 -125470755 + MIR SINE MIR 19 176 -68 234 150 25 0 chr10 20118539 20118579 -125470709 - MER75 DNA T2_type 0 504 464 298 225 0 50 chr10 20118618 20118698 -125470590 + MIR SINE MIR 187 262 0 1487 220 74 55 chr10 20118718 20118763 -125470525 - MLT2B1 LTR ERVL -7 513 470 7815 129 32 9 chr10 20118763 20120029 -125469259 + HSMAR2 DNA Mariner 5 1299 -3 1487 220 74 55 chr10 20120029 20120456 -125468832 - MLT2B1 LTR ERVL -50 470 32 306 317 25 0 chr10 20120908 20121028 -125468260 - MIR SINE MIR 0 262 140 1800 211 44 47 chr10 20121345 20121753 -125467535 - MER74A LTR ERVL -31 527 121 225 222 19 0 chr10 20121872 20121926 -125467362 - MER74B LTR ERVL -518 104 50 22 0 0 0 chr10 20123364 20123386 -125465902 + AT_rich Low_complexity Low_complexity 1 22 0 240 331 39 78 chr10 20123970 20124124 -125465164 + L2 LINE L2 2383 2530 -784 228 241 0 0 chr10 20125030 20125088 -125464200 + CT-rich Low_complexity Low_complexity 3 60 0 1255 213 37 43 chr10 20125194 20125476 -125463812 + MER58B DNA MER1_type 19 300 -2120 2379 89 0 0 chr10 20125476 20125768 -125463520 + AluSc SINE Alu 1 292 -17 1255 213 37 43 chr10 20125768 20125809 -125463479 + MER58B DNA MER1_type 300 340 -1 412 255 136 11 chr10 20125818 20126002 -125463286 + MER3 DNA MER1_type 1 207 -2 248 234 0 0 chr10 20126178 20126225 -125463063 + L2 LINE L2 3213 3259 -13 28 0 0 0 chr10 20126719 20126747 -125462541 + AT_rich Low_complexity Low_complexity 1 28 0 1044 218 116 57 chr10 20126921 20127274 -125462014 + MLT1A2 LTR MaLR 1 374 0 669 285 141 18 chr10 20128036 20128419 -125460869 - MLT1H LTR MaLR -16 533 104 326 231 145 0 chr10 20128507 20128624 -125460664 - L1MC/D LINE L1 -2001 5807 5674 2198 101 0 64 chr10 20128638 20128965 -125460323 - AluSg SINE Alu -4 306 1 239 289 24 12 chr10 20129462 20129545 -125459743 + L2 LINE L2 3227 3310 -3 1686 179 6 28 chr10 20130599 20130918 -125458370 + AluJo SINE Alu 1 312 0 22 56 0 0 chr10 20131442 20131478 -125457810 + GC_rich Low_complexity Low_complexity 1 36 0 462 79 0 0 chr10 20131802 20131865 -125457423 + (TTCC)n Simple_repeat Simple_repeat 3 65 0 2191 75 0 11 chr10 20131867 20132148 -125457140 - AluY SINE Alu -33 278 1 1730 148 11 7 chr10 20132370 20132648 -125456640 - AluJo SINE Alu -25 287 9 294 273 81 30 chr10 20132811 20132910 -125456378 - MER5A DNA MER1_type -77 112 9 478 319 34 43 chr10 20133443 20133650 -125455638 - MIR SINE MIR -44 218 14 320 299 63 32 chr10 20133953 20134174 -125455114 - L1MC4a LINE L1 -1903 5839 5612 1217 148 30 5 chr10 20134471 20134673 -125454615 - AluSg/x SINE Alu 0 312 106 432 127 0 0 chr10 20134673 20134736 -125454552 + AluS SINE Alu 18 80 -233 352 304 42 19 chr10 20135013 20135227 -125454061 - L1MC4a LINE L1 -1109 4971 4753 833 212 54 40 chr10 20135243 20135465 -125453823 - LTR40a LTR ERVL 0 519 295 833 231 57 24 chr10 20135465 20135763 -125453525 - L1MC4a LINE L1 -3161 2919 2612 435 233 78 0 chr10 20135884 20136000 -125453288 - L1MC4a LINE L1 -4633 1628 1504 1247 184 87 3 chr10 20136015 20136314 -125452974 - L1MB2 LINE L1 0 6171 5848 1010 279 50 52 chr10 20136346 20137481 -125451807 - L1ME LINE L1 -4624 1456 332 356 287 52 46 chr10 20137532 20137706 -125451582 - L1ME LINE L1 -5846 224 50 13209 137 20 2 chr10 20137727 20139817 -125449471 - Tigger1 DNA MER2_type -1 2417 291 543 226 0 0 chr10 20139819 20139925 -125449363 + AluJb SINE Alu 192 297 -15 251 226 65 0 chr10 20139925 20139987 -125449301 - Tigger1 DNA MER2_type -2127 291 226 632 162 123 84 chr10 20139990 20140144 -125449144 + AluJo SINE Alu 71 230 -82 209 30 61 0 chr10 20140179 20140212 -125449076 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1378 157 4 8 chr10 20140212 20140442 -125448846 - Tigger1 DNA MER2_type -2189 229 1 2040 111 6 47 chr10 20140816 20141157 -125448131 + L1PB1 LINE L1 5825 6151 0 256 318 0 0 chr10 20141765 20141831 -125447457 + L2 LINE L2 3236 3301 -12 2276 125 0 0 chr10 20143167 20143479 -125445809 - AluSx SINE Alu 0 312 1 40 67 0 0 chr10 20145418 20145493 -125443795 + AT_rich Low_complexity Low_complexity 1 75 0 22 88 0 0 chr10 20146856 20146913 -125442375 + AT_rich Low_complexity Low_complexity 1 57 0 827 326 34 17 chr10 20146979 20147335 -125441953 - MLT1K LTR MaLR -85 503 142 184 315 54 117 chr10 20147522 20147608 -125441680 - L2 LINE L2 -7 3265 3175 2625 156 30 6 chr10 20147608 20148076 -125441212 + L1PA16 LINE L1 5687 6165 -1 184 315 54 117 chr10 20148076 20148322 -125440966 - L2 LINE L2 -97 3175 2954 2050 93 4 0 chr10 20148930 20149198 -125440090 + AluSg SINE Alu 41 309 -1 470 320 74 22 chr10 20149865 20150134 -125439154 - ERVL LTR ERVL -3048 2716 2434 627 245 112 65 chr10 20150139 20150417 -125438871 + ERVL LTR ERVL 3285 3575 -2189 2973 112 13 7 chr10 20150700 20151154 -125438134 - L1PA10 LINE L1 -1 6167 5711 274 210 61 99 chr10 20151276 20151457 -125437831 - L1MEc LINE L1 -4839 1557 1384 225 226 23 45 chr10 20151497 20151674 -125437614 + (TTTA)n Simple_repeat Simple_repeat 1 173 0 * 329 199 38 15 chr10 20151551 20151682 -125437606 + (TA)n Simple_repeat Simple_repeat 2 135 0 2018 120 17 7 chr10 20151770 20152070 -125437218 - AluSq SINE Alu -10 303 1 239 281 68 55 chr10 20152076 20152531 -125436757 - L1MEc LINE L1 -5026 1179 719 2074 134 0 3 chr10 20153154 20153452 -125435836 - AluSx SINE Alu -15 297 1 272 198 30 10 chr10 20154000 20154101 -125435187 + CT-rich Low_complexity Low_complexity 3 105 0 260 192 0 154 chr10 20154365 20154469 -125434819 - L2 LINE L2 -1 3271 3184 527 260 35 40 chr10 20154639 20154839 -125434449 - L1MA9 LINE L1 -49 6263 6065 2022 106 7 0 chr10 20154839 20155113 -125434175 - AluSg SINE Alu -11 299 24 1574 220 27 11 chr10 20155133 20155501 -125433787 + L1MA9 LINE L1 5710 6083 -229 260 331 69 15 chr10 20155587 20155717 -125433571 - L2 LINE L2 -178 3094 2958 318 308 0 45 chr10 20156028 20156161 -125433127 - L2 LINE L2 -839 2475 2349 288 53 0 0 chr10 20156186 20156224 -125433064 + (TG)n Simple_repeat Simple_repeat 2 39 0 198 395 122 6 chr10 20156982 20157154 -125432134 + MIR3 SINE MIR 16 207 -1 2836 3 0 0 chr10 20158911 20159217 -125430071 - AluYa5 SINE Alu -5 306 1 2168 209 63 70 chr10 20161786 20162441 -125426847 - MER82 DNA MER2_type -1 652 3 2313 78 19 29 chr10 20162944 20163251 -125426037 - AluSx SINE Alu -8 304 1 327 214 192 66 chr10 20164095 20164277 -125425011 + MLT1K LTR MaLR 376 580 -8 1864 172 0 3 chr10 20164505 20164796 -125424492 - AluSx SINE Alu -20 292 3 32 0 0 0 chr10 20164809 20164841 -125424447 + AT_rich Low_complexity Low_complexity 1 32 0 212 238 48 48 chr10 20165902 20165986 -125423302 - MIR3 SINE MIR -4 204 121 2106 129 7 7 chr10 20166059 20166368 -125422920 - AluSx SINE Alu -3 309 1 295 210 10 70 chr10 20166373 20166473 -125422815 - HAL1 LINE L1 -1 2506 2413 620 280 106 0 chr10 20166764 20167028 -125422260 - HAL1 LINE L1 -651 1856 1565 1718 216 21 5 chr10 20167049 20167438 -125421850 - MER65C LTR ERV1 0 461 67 713 333 57 34 chr10 20167439 20167857 -125421431 - HAL1 LINE L1 -1376 1131 704 1031 243 15 53 chr10 20167857 20168198 -125421090 + MLT2C1 LTR ERVL 1 328 -69 396 290 57 105 chr10 20168373 20168707 -125420581 - HAL1 LINE L1 -2167 340 23 1947 112 65 7 chr10 20168748 20169046 -125420242 - AluSx SINE Alu 0 312 1 1553 281 31 19 chr10 20170326 20170898 -125418390 - MLT1H1 LTR MaLR 0 555 1 279 322 91 50 chr10 20170909 20171108 -125418180 + MIR SINE MIR 56 262 0 2187 112 12 0 chr10 20171122 20171444 -125417844 - THE1B LTR MaLR -6 358 33 8971 108 11 39 chr10 20171444 20172889 -125416399 - THE1B-int LTR MaLR -52 1528 124 3059 47 3 3 chr10 20172890 20173272 -125416016 - L1PA5 LINE L1 -3 6151 5770 819 77 0 0 chr10 20173272 20173376 -125415912 - AluY SINE Alu -8 303 200 1326 87 19 29 chr10 20173619 20173825 -125415463 - AluY SINE Alu -107 204 1 4120 47 3 2 chr10 20173825 20174484 -125414804 - L1P2 LINE L1 -368 5786 5127 * 4918 69 0 30 chr10 20174482 20175194 -125414094 + L1P2 LINE L1 4437 5127 -1019 843 114 0 0 chr10 20175191 20175322 -125413966 - THE1B-int LTR MaLR -1449 131 1 * 2583 110 6 6 chr10 20175322 20175686 -125413602 - THE1B LTR MaLR 0 364 1 775 274 90 0 chr10 20175948 20176182 -125413106 - MIR SINE MIR 0 262 8 1935 81 25 7 chr10 20176343 20176627 -125412661 + L1MA1 LINE L1 6014 6302 0 21 57 0 0 chr10 20176985 20177020 -125412268 + AT_rich Low_complexity Low_complexity 1 35 0 35528 38 25 2 chr10 20177149 20182600 -125406688 + L1PA3 LINE L1 567 6151 -4 25 0 0 0 chr10 20182600 20182625 -125406663 + AT_rich Low_complexity Low_complexity 1 25 0 288 279 29 0 chr10 20182859 20182963 -125406325 - L1ME LINE L1 -5961 109 3 647 192 47 131 chr10 20182984 20183204 -125406084 - L1MA10 LINE L1 -1 6333 6143 2240 118 6 6 chr10 20183204 20183517 -125405771 + AluSp SINE Alu 1 313 0 647 192 47 131 chr10 20183517 20183593 -125405695 - L1MA10 LINE L1 -191 6143 6062 752 163 20 0 chr10 20183710 20183857 -125405431 - L1MB1 LINE L1 -119 6049 5900 * 1203 183 28 16 chr10 20183854 20184136 -125405152 + L1MB1 LINE L1 5643 5933 -233 25 31 0 0 chr10 20184195 20184227 -125405061 + AT_rich Low_complexity Low_complexity 1 32 0 1584 206 0 0 chr10 20184228 20184515 -125404773 - AluJb SINE Alu -25 287 1 234 0 0 0 chr10 20184754 20184780 -125404508 + (TG)n Simple_repeat Simple_repeat 2 27 0 239 328 58 32 chr10 20185091 20185280 -125404008 - MLT1K LTR MaLR -18 570 377 404 140 11 0 chr10 20185910 20186003 -125403285 + (TCTA)n Simple_repeat Simple_repeat 1 94 0 596 204 0 0 chr10 20186021 20186129 -125403159 + FLAM_C SINE Alu 24 131 -12 430 270 6 0 chr10 20186134 20186312 -125402976 + (TA)n Simple_repeat Simple_repeat 2 180 0 200 211 0 53 chr10 20186422 20186479 -125402809 + (TCTA)n Simple_repeat Simple_repeat 1 54 0 21 36 0 0 chr10 20187311 20187339 -125401949 + AT_rich Low_complexity Low_complexity 1 28 0 225 375 27 43 chr10 20187762 20187870 -125401418 + MIR SINE MIR 45 150 -112 2194 120 0 0 chr10 20187870 20188161 -125401127 + AluSx SINE Alu 5 295 -17 225 375 27 43 chr10 20188161 20188261 -125401027 + MIR SINE MIR 150 250 -12 5435 40 0 0 chr10 20188441 20189124 -125400164 + L1PA5 LINE L1 5494 6176 0 405 226 274 0 chr10 20190340 20190486 -125398802 - MER5A DNA MER1_type -3 186 1 438 216 138 52 chr10 20190543 20190775 -125398513 - MLT1L LTR MaLR -40 575 324 222 118 0 0 chr10 20190980 20191014 -125398274 + (TTCC)n Simple_repeat Simple_repeat 1 34 0 1084 110 51 11 chr10 20191015 20191224 -125398064 - MLT2A2 LTR ERVL 0 453 292 959 299 108 47 chr10 20191742 20192327 -125396961 + L2 LINE L2 2372 3083 -230 2678 152 34 13 chr10 20192327 20192801 -125396487 + LTR45B LTR ERV1 3 486 -3 959 299 108 47 chr10 20192801 20193047 -125396241 + L2 LINE L2 3083 3313 0 758 191 24 175 chr10 20193225 20193383 -125395905 - L1ME2 LINE L1 0 6444 6264 4202 149 29 27 chr10 20193383 20194166 -125395122 - LTR1 LTR ERV1 0 785 1 758 191 24 175 chr10 20194166 20194444 -125394844 - L1ME2 LINE L1 -180 6264 6093 2487 54 0 0 chr10 20194444 20194738 -125394550 - AluY SINE Alu -17 294 1 758 191 24 175 chr10 20194738 20194808 -125394480 - L1ME2 LINE L1 -351 6093 6014 323 187 40 0 chr10 20194802 20194877 -125394411 - L1M4 LINE L1 -3400 2746 2669 * 632 231 65 15 chr10 20194863 20195835 -125393453 - L1ME2 LINE L1 -434 6010 4868 339 192 50 20 chr10 20195831 20195930 -125393358 - L1ME2 LINE L1 -3400 3026 2925 * 239 182 117 13 chr10 20195999 20196034 -125393254 - L1ME2 LINE L1 -5543 883 853 486 0 0 0 chr10 20196034 20196088 -125393200 + (TTTA)n Simple_repeat Simple_repeat 3 56 0 239 182 117 13 chr10 20196088 20196129 -125393159 - L1ME2 LINE L1 -5573 853 799 292 140 18 18 chr10 20196130 20196187 -125393101 + LTR45 LTR ERV1 469 525 0 1298 207 17 20 chr10 20196195 20196495 -125392793 - L1ME2 LINE L1 -5628 798 500 752 209 87 6 chr10 20196492 20196664 -125392624 - L1ME2 LINE L1 -6220 206 21 * 591 258 52 104 chr10 20196665 20197753 -125391535 - L1ME LINE L1 -4958 1122 102 3756 175 43 7 chr10 20197769 20198449 -125390839 + MER44D DNA MER2_type 1 704 -1 1004 215 54 90 chr10 20198462 20198830 -125390458 + MLT1C LTR MaLR 113 467 0 423 174 0 0 chr10 20198830 20198916 -125390372 + (CA)n Simple_repeat Simple_repeat 1 86 0 880 218 35 123 chr10 20199464 20199864 -125389424 + MLT1A1 LTR MaLR 1 365 0 192 333 35 0 chr10 20200148 20200235 -125389053 - L2 LINE L2 -234 3079 2990 229 313 40 10 chr10 20200341 20200440 -125388848 - L2 LINE L2 -517 2797 2696 719 123 0 8 chr10 20200440 20200570 -125388718 - L1P LINE L1 -1440 4706 4578 2819 77 0 0 chr10 20200570 20200928 -125388360 + L1PA7 LINE L1 5785 6147 -7 445 165 44 0 chr10 20200946 20201037 -125388251 - L1MA7 LINE L1 -370 5942 5848 1284 141 55 108 chr10 20201038 20201400 -125387888 + L1MA7 LINE L1 5939 6281 -10 1315 280 32 62 chr10 20201975 20202510 -125386778 - LTR40a LTR ERVL 0 519 1 504 317 115 16 chr10 20203496 20203862 -125385426 - L2 LINE L2 0 3313 2912 294 217 117 50 chr10 20203910 20204030 -125385258 - MIR SINE MIR -46 216 89 1496 203 35 17 chr10 20204180 20204525 -125384763 - MLT1A2 LTR MaLR -20 354 4 383 340 151 28 chr10 20204688 20204979 -125384309 + L2 LINE L2 2946 3272 0 294 206 32 0 chr10 20204978 20205041 -125384247 + MIR SINE MIR 86 150 -112 * 2457 40 3 3 chr10 20205748 20206044 -125383244 - AluYa5 SINE Alu -15 296 1 524 208 0 0 chr10 20206217 20206313 -125382975 - MLT1E LTR MaLR -458 135 40 574 187 55 55 chr10 20206362 20206546 -125382742 + L1MA10 LINE L1 5991 6332 -2 22 0 0 0 chr10 20206758 20206780 -125382508 + AT_rich Low_complexity Low_complexity 1 22 0 369 301 160 13 chr10 20207439 20207595 -125381693 + MIR SINE MIR 19 176 -68 914 255 89 30 chr10 20207802 20208360 -125380928 - HAL1b LINE L1 -424 2083 399 241 207 0 17 chr10 20208385 20208443 -125380845 + (TA)n Simple_repeat Simple_repeat 1 57 0 1000 180 86 66 chr10 20208446 20208840 -125380448 - L1MC4 LINE L1 0 8042 7641 818 219 59 83 chr10 20208929 20209454 -125379834 - HAL1 LINE L1 -1144 1363 850 603 303 98 94 chr10 20209440 20209951 -125379337 - LTR33 LTR ERVL -8 513 1 * 248 317 37 0 chr10 20209951 20210033 -125379255 - HAL1 LINE L1 -1635 872 788 1619 188 14 10 chr10 20210176 20210468 -125378820 - AluJo SINE Alu -14 298 6 320 269 23 85 chr10 20210573 20210703 -125378585 - HAL1 LINE L1 -2295 212 91 212 260 27 27 chr10 20213859 20213932 -125375356 + MIR SINE MIR 75 147 -61 29 47 0 0 chr10 20214777 20214820 -125374468 + AT_rich Low_complexity Low_complexity 1 43 0 26456 98 16 5 chr10 20214941 20219656 -125369632 - L1PA7 LINE L1 0 6154 1395 1879 214 5 22 chr10 20219645 20220056 -125369232 - L1MCb LINE L1 -5128 917 514 * 21 0 0 0 chr10 20220243 20220264 -125369024 + AT_rich Low_complexity Low_complexity 1 21 0 231 337 166 5 chr10 20220714 20220907 -125368381 + L2 LINE L2 2616 2839 -475 257 287 191 0 chr10 20221175 20221290 -125367998 + L2 LINE L2 3134 3270 -2 348 117 17 0 chr10 20221396 20221456 -125367832 - L1MB5 LINE L1 -7 6167 6107 1398 192 27 69 chr10 20221488 20221863 -125367425 - L1MB5 LINE L1 -33 6141 5783 402 143 33 0 chr10 20222450 20222541 -125366747 + (TA)n Simple_repeat Simple_repeat 2 95 0 317 148 45 40 chr10 20222600 20222776 -125366512 + (TA)n Simple_repeat Simple_repeat 1 177 0 456 308 0 0 chr10 20223102 20223222 -125366066 + MER58B DNA MER1_type 222 341 0 180 111 0 0 chr10 20225145 20225172 -125364116 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 261 0 0 0 chr10 20225922 20225951 -125363337 + (TA)n Simple_repeat Simple_repeat 2 30 0 315 0 0 0 chr10 20225951 20225986 -125363302 + (T)n Simple_repeat Simple_repeat 1 35 0 1657 156 0 53 chr10 20226086 20226368 -125362920 - AluJo SINE Alu -45 267 1 445 268 168 6 chr10 20226374 20226553 -125362735 + L2 LINE L2 2004 2211 -1103 24 32 0 0 chr10 20227519 20227550 -125361738 + AT_rich Low_complexity Low_complexity 1 31 0 756 263 84 5 chr10 20228107 20228373 -125360915 - MER110A LTR ERV1 0 468 213 1973 102 0 7 chr10 20228772 20229057 -125360231 - L1PA8 LINE L1 -3 6169 5887 1877 47 0 0 chr10 20229057 20229290 -125359998 + L1PA8 LINE L1 5653 5885 -287 492 328 110 60 chr10 20229342 20229749 -125359539 - L3 LINE CR1 -166 1411 971 2035 129 17 0 chr10 20229749 20230036 -125359252 + AluSx SINE Alu 6 297 -15 492 328 110 60 chr10 20230036 20230147 -125359141 - L3 LINE CR1 -606 971 867 447 313 95 29 chr10 20230154 20230397 -125358891 + MIR SINE MIR 3 261 -1 613 294 14 32 chr10 20230678 20230896 -125358392 - MER58C DNA MER1_type 0 215 2 2510 55 3 3 chr10 20231354 20231661 -125357627 + AluY SINE Alu 1 307 -4 23 54 0 0 chr10 20231712 20231749 -125357539 + AT_rich Low_complexity Low_complexity 1 37 0 1980 124 0 17 chr10 20232403 20232701 -125356587 + AluSc SINE Alu 1 293 -16 2389 43 43 16 chr10 20233879 20234182 -125355106 - AluY SINE Alu 0 311 1 387 77 0 0 chr10 20234370 20234422 -125354866 - Alu SINE Alu -9 293 242 589 280 16 54 chr10 20234461 20234647 -125354641 + MIR SINE MIR 18 196 -66 2196 83 4 0 chr10 20234698 20234976 -125354312 - AluY SINE Alu -16 295 17 5384 207 49 24 chr10 20235197 20237709 -125351579 - L1MC1 LINE L1 0 6613 4027 1545 210 64 69 chr10 20237731 20238102 -125351186 - L1MC1 LINE L1 -3915 2692 2320 372 59 0 0 chr10 20238102 20238153 -125351135 + (TA)n Simple_repeat Simple_repeat 2 52 0 1545 210 64 69 chr10 20238153 20238976 -125350312 - L1MC1 LINE L1 -4287 2320 1461 854 161 0 0 chr10 20239017 20239147 -125350141 - FLAM_C SINE Alu -3 130 1 2230 108 6 0 chr10 20239928 20240253 -125349035 - pTR5 LTR ERV1 -2046 392 66 313 245 31 20 chr10 20240253 20240351 -125348937 - LTR30 LTR ERV1 -80 642 544 2252 211 43 103 chr10 20240355 20241216 -125348072 - pTR5 LTR ERV1 -417 2021 743 212 367 41 10 chr10 20241531 20241629 -125347659 + L2 LINE L2 3171 3271 -1 30 0 0 0 chr10 20241844 20241874 -125347414 + AT_rich Low_complexity Low_complexity 1 30 0 1952 108 0 7 chr10 20241943 20242212 -125347076 - AluSc SINE Alu -8 301 35 188 263 0 0 chr10 20242318 20242356 -125346932 - L2 LINE L2 -11 3302 3265 21 0 0 0 chr10 20242417 20242438 -125346850 + AT_rich Low_complexity Low_complexity 1 21 0 1591 194 16 68 chr10 20243502 20243883 -125345405 + MLT1A2 LTR MaLR 1 361 -13 346 295 209 34 chr10 20243921 20244270 -125345018 + LTR16C LTR ERVL 73 482 -9 1658 233 7 55 chr10 20244498 20244757 -125344531 + MER57B LTR ERV1 1 230 -204 2180 132 0 0 chr10 20244757 20245068 -125344220 - AluSx SINE Alu -1 311 1 1658 233 7 55 chr10 20245068 20245264 -125344024 + MER57B LTR ERV1 230 434 0 454 335 25 25 chr10 20245268 20245465 -125343823 + MER57B-int LTR ERV1 3 199 -7338 201 292 0 83 chr10 20245551 20245647 -125343641 - MER5A DNA MER1_type -42 147 60 511 174 0 0 chr10 20246429 20246515 -125342773 + AluSc SINE Alu 210 295 -14 296 306 99 0 chr10 20248144 20248255 -125341033 + L2 LINE L2 3138 3259 -13 210 118 0 0 chr10 20249517 20249551 -125339737 + (T)n Simple_repeat Simple_repeat 1 34 0 1096 173 5 0 chr10 20249598 20249783 -125339505 - MER50 LTR ERV1 -23 711 526 2171 143 42 20 chr10 20250529 20250885 -125338403 - THE1B LTR MaLR 0 364 1 185 246 15 0 chr10 20251167 20251232 -125338056 + (CATA)n Simple_repeat Simple_repeat 3 68 0 987 99 35 0 chr10 20251814 20251955 -125337333 + L1PA11 LINE L1 6025 6170 -4 190 107 0 0 chr10 20252154 20252182 -125337106 - MIR SINE MIR -122 140 113 193 288 88 38 chr10 20252715 20252795 -125336493 + L2 LINE L2 3186 3269 -3 312 362 38 9 chr10 20253028 20253133 -125336155 - L2 LINE L2 0 3272 3165 406 288 135 22 chr10 20253254 20253483 -125335805 - MLT1K LTR MaLR -69 519 265 1294 302 57 28 chr10 20253868 20254836 -125334452 + L1M4 LINE L1 4077 5092 -1065 2187 116 0 13 chr10 20254836 20255137 -125334151 - AluSx SINE Alu -13 299 3 1294 302 57 28 chr10 20255137 20255414 -125333874 + L1M4 LINE L1 5092 5360 -797 401 242 193 53 chr10 20255423 20255744 -125333544 + L1M4 LINE L1 5465 5835 -339 3705 183 22 62 chr10 20256165 20257009 -125332279 + L1PA16 LINE L1 5341 6151 -15 2329 113 0 0 chr10 20257553 20257853 -125331435 - AluSx SINE Alu -10 302 3 239 313 111 46 chr10 20257935 20258242 -125331046 + L1MEd LINE L1 59 385 -5734 21355 65 5 7 chr10 20258276 20263268 -125326020 + L1PA5 LINE L1 1192 6154 0 1163 146 20 185 chr10 20263675 20264080 -125325208 + MER44D DNA MER2_type 1 608 -1 766 222 71 10 chr10 20264086 20264284 -125325004 + MER63A DNA MER1_type 1 210 0 1115 153 6 0 chr10 20314886 20315056 -125274232 + AluSg/x SINE Alu 134 304 -8 448 222 115 127 chr10 20315062 20315270 -125274018 - MER66A LTR ERV1 -77 401 295 2394 90 3 0 chr10 20315270 20315582 -125273706 + AluSp SINE Alu 1 313 0 448 222 115 127 chr10 20315582 20315779 -125273509 - MER66A LTR ERV1 -183 295 97 1223 178 89 22 chr10 20316305 20316575 -125272713 + MER2 DNA MER2_type 58 345 0 203 348 62 53 chr10 20316579 20316761 -125272527 - MIR SINE MIR -56 206 27 270 229 0 0 chr10 20317150 20317220 -125272068 + CT-rich Low_complexity Low_complexity 1 70 0 293 329 90 18 chr10 20317907 20318074 -125271214 + MIR SINE MIR 51 229 -33 402 205 259 9 chr10 20318697 20318809 -125270479 + MIR SINE MIR 31 170 -92 1230 278 109 54 chr10 20319644 20320433 -125268855 - L1ME LINE L1 -4485 1776 1032 1715 170 109 0 chr10 20320433 20320763 -125268525 - MER47A DNA MER2_type 0 366 1 1230 278 109 54 chr10 20320763 20321101 -125268187 - L1ME LINE L1 -5229 1032 714 2079 134 3 10 chr10 20321101 20321415 -125267873 - AluSx SINE Alu 0 312 1 1230 278 109 54 chr10 20321415 20321774 -125267514 - L1ME LINE L1 -5547 714 154 307 333 45 18 chr10 20322176 20322287 -125267001 - L2 LINE L2 -20 3252 3139 1009 261 46 15 chr10 20322484 20322813 -125266475 - MER58B DNA MER1_type 0 341 3 2031 136 0 10 chr10 20323184 20323479 -125265809 - AluSx SINE Alu -20 292 1 33 56 0 0 chr10 20323509 20323563 -125265725 + AT_rich Low_complexity Low_complexity 1 54 0 1901 141 60 20 chr10 20323672 20324019 -125265269 + MER46B DNA MER2_type 1 236 0 1891 220 43 77 chr10 20325477 20326122 -125263166 + MLT1E2 LTR MaLR 1 618 -8 363 73 44 0 chr10 20326511 20326579 -125262709 + (TCTA)n Simple_repeat Simple_repeat 4 74 0 2689 229 54 25 chr10 20326593 20327431 -125261857 - L1M4 LINE L1 -1006 5638 4777 255 338 21 55 chr10 20327996 20328141 -125261147 + MIR SINE MIR 17 156 -106 241 326 11 0 chr10 20328275 20328364 -125260924 + MIR SINE MIR 172 261 -1 25 31 0 0 chr10 20328371 20328403 -125260885 + AT_rich Low_complexity Low_complexity 1 32 0 493 137 0 49 chr10 20328410 20328512 -125260776 - L1PA11 LINE L1 -2 6172 6076 5049 243 59 15 chr10 20328520 20330024 -125259264 - L1M4 LINE L1 -2192 4452 2831 7198 159 12 1 chr10 20330024 20332056 -125257232 + L1PA11 LINE L1 4130 6174 0 5049 243 59 15 chr10 20332056 20332627 -125256661 - L1M4 LINE L1 -3813 2831 2287 3846 254 94 21 chr10 20332680 20333090 -125256198 - L1M4 LINE L1 -5237 1305 926 1724 184 45 28 chr10 20333090 20333449 -125255839 - MLT1A1 LTR MaLR 0 365 1 3846 254 94 21 chr10 20333449 20334253 -125255035 - L1M4 LINE L1 -5616 926 2 3190 119 92 0 chr10 20336930 20337461 -125251827 - LTR19B LTR ERV1 0 580 1 1769 106 8 0 chr10 20337821 20338085 -125251203 - L1MA2 LINE L1 0 6304 6039 415 198 104 10 chr10 20338532 20338628 -125250660 + MER81 DNA DNA 10 114 0 186 103 0 0 chr10 20338793 20338822 -125250466 + (T)n Simple_repeat Simple_repeat 1 29 0 22 0 0 0 chr10 20338828 20338850 -125250438 + AT_rich Low_complexity Low_complexity 1 22 0 42809 31 21 1 chr10 20338850 20344883 -125244405 - L1HS LINE L1 0 6155 1 403 324 28 16 chr10 20347320 20347502 -125241786 - MIR SINE MIR 0 262 79 3085 140 53 2 chr10 20347861 20348388 -125240900 + MER41C LTR ERV1 1 554 0 2067 191 35 116 chr10 20348941 20349607 -125239681 - LTR9 LTR ERV1 0 612 1 27 22 0 22 chr10 20350014 20350028 -125239260 + AT_rich Low_complexity Low_complexity 1 14 -30 1991 112 17 14 chr10 20350028 20350315 -125238973 - AluSx SINE Alu -14 298 11 27 22 0 22 chr10 20350315 20350345 -125238943 + AT_rich Low_complexity Low_complexity 14 44 0 566 277 114 20 chr10 20351309 20351511 -125237777 - MIR SINE MIR -10 252 32 184 135 68 0 chr10 20351511 20351585 -125237703 + (TA)n Simple_repeat Simple_repeat 1 79 0 29 28 0 0 chr10 20351604 20351640 -125237648 + AT_rich Low_complexity Low_complexity 1 36 0 235 129 45 52 chr10 20351671 20351826 -125237462 + (TATAA)n Simple_repeat Simple_repeat 5 158 0 422 133 66 12 chr10 20351869 20352035 -125237253 + (TA)n Simple_repeat Simple_repeat 2 176 0 24 0 0 0 chr10 20352069 20352093 -125237195 + AT_rich Low_complexity Low_complexity 1 24 0 342 208 60 6 chr10 20352112 20352311 -125236977 + (TA)n Simple_repeat Simple_repeat 1 209 0 272 135 27 36 chr10 20352314 20352425 -125236863 + (TATAA)n Simple_repeat Simple_repeat 1 110 0 1994 128 3 3 chr10 20353115 20353413 -125235875 - AluSx SINE Alu -14 298 1 2266 78 31 0 chr10 20353544 20353838 -125235450 + AluY SINE Alu 1 303 -8 216 0 0 0 chr10 20354209 20354233 -125235055 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 21 0 0 0 chr10 20354785 20354806 -125234482 + AT_rich Low_complexity Low_complexity 1 21 0 4770 175 50 29 chr10 20355151 20356300 -125232988 - L1MA6 LINE L1 0 7321 6153 359 36 55 0 chr10 20356339 20356394 -125232894 - L1MA4A LINE L1 -21 6282 6225 640 154 0 26 chr10 20356395 20356512 -125232776 - L1MA4A LINE L1 -275 6028 5915 * 5411 217 45 12 chr10 20356507 20358164 -125231124 - L1MA6 LINE L1 -2557 4610 2899 2520 234 37 49 chr10 20358191 20358660 -125230628 - L1MA6 LINE L1 -4521 2647 2174 2846 9 0 9 chr10 20358660 20358981 -125230307 - AluYb8 SINE Alu 0 318 1 2520 234 37 49 chr10 20358981 20359515 -125229773 - L1MA6 LINE L1 -4994 2174 1696 1736 340 8 10 chr10 20359892 20360490 -125228798 - L1MA6 LINE L1 -6569 599 3 337 385 117 15 chr10 20361604 20362066 -125227222 - L2 LINE L2 -2513 801 293 22 0 0 0 chr10 20362414 20362436 -125226852 + AT_rich Low_complexity Low_complexity 1 22 0 195 186 0 0 chr10 20363699 20363742 -125225546 + CT-rich Low_complexity Low_complexity 3 45 0 236 344 11 11 chr10 20363749 20363842 -125225446 + C-rich Low_complexity Low_complexity 2 94 0 233 253 0 12 chr10 20363842 20363925 -125225363 + CT-rich Low_complexity Low_complexity 2 83 0 465 34 0 0 chr10 20364057 20364116 -125225172 + (CA)n Simple_repeat Simple_repeat 2 60 0 1610 134 71 0 chr10 20364656 20364895 -125224393 + AluSx SINE Alu 38 293 -19 1011 235 4 28 chr10 20364924 20364974 -125224314 + MER74A LTR ERVL 194 244 -314 1776 207 24 3 chr10 20364974 20365356 -125223932 - MLT1B LTR MaLR 0 390 1 1011 235 4 28 chr10 20365356 20365552 -125223736 + MER74A LTR ERVL 244 434 -124 594 112 10 10 chr10 20365594 20365692 -125223596 + L1PA13 LINE L1 6053 6150 -13 1784 119 0 0 chr10 20365919 20366163 -125223125 + AluSg SINE Alu 60 303 -7 2351 95 0 19 chr10 20367071 20367386 -125221902 + AluSx SINE Alu 1 309 -3 606 295 48 51 chr10 20368133 20368469 -125220819 - L2 LINE L2 0 3313 2979 2879 141 50 28 chr10 20368475 20369066 -125220222 - MER4B LTR ERV1 0 779 9 2386 240 99 180 chr10 20369130 20369542 -125219746 - L2 LINE L2 -518 2796 2352 5181 84 13 0 chr10 20369542 20370223 -125219065 - LTR8 LTR ERV1 -1 690 1 2386 240 99 180 chr10 20370223 20370719 -125218569 - L2 LINE L2 -962 2352 1818 1489 153 57 82 chr10 20370719 20371008 -125218280 + L1MB5 LINE L1 5817 6112 -62 2174 120 3 0 chr10 20371008 20371308 -125217980 - AluSq SINE Alu -12 301 1 2202 101 14 0 chr10 20371308 20371604 -125217684 - AluSx SINE Alu -12 300 1 1489 153 57 82 chr10 20371604 20371680 -125217608 + L1MB5 LINE L1 6110 6174 0 2386 240 99 180 chr10 20371680 20372998 -125216290 - L2 LINE L2 -1496 1818 418 2095 106 0 33 chr10 20372998 20373300 -125215988 - AluSx SINE Alu -20 292 1 2386 240 99 180 chr10 20373300 20373360 -125215928 - L2 LINE L2 -2896 418 355 222 37 0 0 chr10 20373563 20373590 -125215698 + (TG)n Simple_repeat Simple_repeat 1 27 0 1663 177 3 43 chr10 20374190 20374489 -125214799 + AluJo SINE Alu 3 289 -23 2262 129 0 0 chr10 20375200 20375510 -125213778 - AluSx SINE Alu -2 310 1 1101 128 0 0 chr10 20375534 20375714 -125213574 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 219 263 0 0 chr10 20375762 20375819 -125213469 + T-rich Low_complexity Low_complexity 1 57 0 30 0 0 0 chr10 20376962 20376992 -125212296 + AT_rich Low_complexity Low_complexity 1 30 0 3239 75 20 2 chr10 20377027 20377469 -125211819 - L1PA10 LINE L1 -11 6157 5708 989 236 62 22 chr10 20377517 20377792 -125211496 - L1MCb LINE L1 -5047 998 713 2661 231 147 14 chr10 20379248 20379988 -125209300 - MER21B LTR ERV1 -19 844 6 259 220 29 18 chr10 20379992 20380281 -125209007 + (TA)n Simple_repeat Simple_repeat 1 292 0 291 162 30 0 chr10 20380925 20381024 -125208264 + (TATG)n Simple_repeat Simple_repeat 3 104 0 24 0 0 0 chr10 20382063 20382087 -125207201 + AT_rich Low_complexity Low_complexity 1 24 0 1418 118 0 14 chr10 20383194 20383405 -125205883 - AluSg/x SINE Alu -6 306 99 440 66 0 165 chr10 20384694 20384785 -125204503 + MADE1 DNA Mariner 1 76 -4 21 0 0 0 chr10 20385318 20385339 -125203949 + AT_rich Low_complexity Low_complexity 1 21 0 1911 154 7 3 chr10 20385425 20385718 -125203570 - AluSx SINE Alu -18 294 1 931 185 46 0 chr10 20385826 20386021 -125203267 + MER3 DNA MER1_type 2 205 -4 402 50 33 0 chr10 20386605 20386665 -125202623 - L1PA6 LINE L1 0 6154 6093 2200 109 0 13 chr10 20387517 20387829 -125201459 + AluSg SINE Alu 1 308 -2 2204 122 3 0 chr10 20388616 20388911 -125200377 - AluSx SINE Alu -14 298 3 479 238 182 0 chr10 20389937 20390080 -125199208 + MER5A DNA MER1_type 21 189 0 23 0 0 0 chr10 20390227 20390250 -125199038 + AT_rich Low_complexity Low_complexity 1 23 0 2938 169 44 11 chr10 20390627 20390720 -125198568 + L1MA9 LINE L1 5676 5765 -547 393 22 0 0 chr10 20390720 20390766 -125198522 + (TG)n Simple_repeat Simple_repeat 2 47 0 2938 169 44 11 chr10 20390766 20391289 -125197999 + L1MA9 LINE L1 5765 6312 0 1888 147 32 0 chr10 20391414 20391755 -125197533 + L1MB3 LINE L1 5828 6179 -4 2626 52 0 0 chr10 20392084 20392391 -125196897 + AluY SINE Alu 1 307 -4 323 292 25 42 chr10 20393697 20393817 -125195471 + MER94 DNA DNA 17 134 0 427 214 141 32 chr10 20394399 20394557 -125194731 + MER8 DNA MER2_type 50 345 0 358 326 144 5 chr10 20394890 20395077 -125194211 + MIR SINE MIR 22 234 -28 1959 146 0 32 chr10 20395555 20395871 -125193417 + AluSx SINE Alu 1 306 -6 215 345 35 0 chr10 20396902 20396989 -125192299 - L3b LINE CR1 -275 1308 1219 740 165 16 8 chr10 20397223 20397350 -125191938 - FLAM_C SINE Alu -14 129 2 367 295 93 0 chr10 20398539 20398668 -125190620 + MIR SINE MIR 115 255 -7 198 0 0 0 chr10 20398982 20399004 -125190284 + (TA)n Simple_repeat Simple_repeat 2 23 0 525 58 0 0 chr10 20399255 20399324 -125189964 + (TCTA)n Simple_repeat Simple_repeat 1 69 0 1262 140 0 39 chr10 20399326 20399533 -125189755 - AluSg/x SINE Alu -29 283 85 1732 239 27 23 chr10 20399871 20400389 -125188899 - L1ME1 LINE L1 -2 6164 5645 216 0 0 0 chr10 20400410 20400434 -125188854 + (TTTTTG)n Simple_repeat Simple_repeat 3 26 0 1011 294 21 50 chr10 20400434 20400853 -125188435 - L1MEc LINE L1 -5834 562 156 350 356 97 36 chr10 20400978 20401368 -125187920 - L1MC/D LINE L1 -1985 5823 5410 849 274 109 33 chr10 20401395 20402062 -125187226 - L1MC/D LINE L1 -1634 4512 3795 664 330 68 57 chr10 20402500 20403627 -125185661 - L1M4 LINE L1 -1461 4685 3540 1472 186 100 4 chr10 20403627 20403907 -125185381 + AluJo SINE Alu 1 307 -5 664 330 68 57 chr10 20403907 20404043 -125185245 - L1M4 LINE L1 -2606 3540 3407 269 291 146 0 chr10 20405819 20405929 -125183359 + MIR SINE MIR 8 133 -129 184 283 87 0 chr10 20406028 20406074 -125183214 + L2 LINE L2 3210 3259 -13 189 147 0 0 chr10 20406478 20406512 -125182776 + (TTTTC)n Simple_repeat Simple_repeat 1 34 0 2001 88 92 3 chr10 20407454 20407738 -125181550 - AluY SINE Alu 0 311 3 299 352 48 16 chr10 20408822 20408947 -125180341 - L2 LINE L2 -8 3264 3136 180 125 0 0 chr10 20409416 20409448 -125179840 + (TG)n Simple_repeat Simple_repeat 1 32 0 217 219 0 0 chr10 20409831 20409872 -125179416 + GA-rich Low_complexity Low_complexity 3 43 0 33 90 0 0 chr10 20410059 20410148 -125179140 + AT_rich Low_complexity Low_complexity 1 89 0 6661 27 0 0 chr10 20410371 20411174 -125178114 - L1P LINE L1 -2210 3936 3134 4785 9 0 0 chr10 20411170 20411709 -125177579 + L1HS LINE L1 5616 6154 -1 * 258 116 0 0 chr10 20411723 20411766 -125177522 + (A)n Simple_repeat Simple_repeat 1 43 0 604 207 58 46 chr10 20411836 20411941 -125177347 + MER3 DNA MER1_type 1 64 -98 2104 108 0 4 chr10 20411941 20412265 -125177023 + AluSc SINE Alu 1 323 0 604 207 58 46 chr10 20412265 20412332 -125176956 + MER3 DNA MER1_type 64 129 -33 200 167 21 0 chr10 20412466 20412514 -125176774 + CT-rich Low_complexity Low_complexity 2 50 0 4879 106 9 36 chr10 20412768 20413043 -125176245 + L1PA14 LINE L1 5403 5684 -477 1840 165 0 22 chr10 20413043 20413359 -125175929 + AluJb SINE Alu 1 309 -3 4879 106 9 36 chr10 20413359 20413863 -125175425 + L1PA14 LINE L1 5684 6161 0 21 36 0 0 chr10 20414613 20414641 -125174647 + AT_rich Low_complexity Low_complexity 1 28 0 267 259 0 0 chr10 20414871 20414929 -125174359 + L2 LINE L2 3213 3270 -2 216 0 0 0 chr10 20415436 20415460 -125173828 + (TA)n Simple_repeat Simple_repeat 2 25 0 1315 113 0 21 chr10 20415459 20415695 -125173593 - AluSp SINE Alu 0 335 104 489 67 0 0 chr10 20415695 20415755 -125173533 + AluS SINE Alu 19 78 -235 2424 138 23 9 chr10 20416479 20416914 -125172374 + L1MA4 LINE L1 5853 6293 -7 307 306 88 16 chr10 20417034 20417210 -125172078 + MIR SINE MIR 3 192 -70 191 296 197 38 chr10 20417210 20417271 -125172017 + MIR SINE MIR 1 51 -211 2101 126 0 0 chr10 20417271 20417572 -125171716 + AluY SINE Alu 1 301 -10 191 296 197 38 chr10 20417572 20417642 -125171646 + MIR SINE MIR 51 153 -109 276 225 28 14 chr10 20418106 20418177 -125171111 + MIR SINE MIR 159 230 -32 201 265 103 0 chr10 20418191 20418259 -125171029 + L2 LINE L2 3226 3300 -13 476 318 7 0 chr10 20419343 20419491 -125169797 + MER46C DNA MER2_type 190 338 0 196 329 0 76 chr10 20420100 20420179 -125169109 + L3b LINE CR1 1500 1572 -11 306 285 225 7 chr10 20420946 20421097 -125168191 + MIR SINE MIR 73 256 -6 23 33 0 0 chr10 20421605 20421635 -125167653 + AT_rich Low_complexity Low_complexity 1 30 0 231 235 47 24 chr10 20421635 20421720 -125167568 - L1MC4 LINE L1 -1339 6703 6617 225 262 71 0 chr10 20421651 20421735 -125167553 + L1MC4 LINE L1 6614 6703 -1339 * 279 293 0 0 chr10 20421740 20421863 -125167425 + (TA)n Simple_repeat Simple_repeat 1 123 0 234 176 78 0 chr10 20421863 20421914 -125167374 + L1MC4 LINE L1 6648 6702 -1340 362 115 11 35 chr10 20421916 20422003 -125167285 + (TA)n Simple_repeat Simple_repeat 1 85 0 330 193 108 0 chr10 20422013 20422096 -125167192 - L1MC4 LINE L1 -1339 6703 6612 537 98 9 70 chr10 20422100 20422337 -125166951 + (TA)n Simple_repeat Simple_repeat 1 222 0 226 207 49 0 chr10 20422338 20422420 -125166868 - L1MC4 LINE L1 -1341 6701 6616 235 333 42 31 chr10 20423550 20423742 -125165546 - L1MC/D LINE L1 -494 5748 5555 1636 216 63 24 chr10 20424079 20424504 -125164784 - MER39 LTR ERV1 0 707 266 240 297 14 14 chr10 20424516 20424590 -125164698 - MER34C LTR ERV1 -506 79 6 188 182 23 0 chr10 20424719 20424763 -125164525 + CT-rich Low_complexity Low_complexity 2 46 0 235 170 38 0 chr10 20424933 20424986 -125164302 + (TATG)n Simple_repeat Simple_repeat 3 57 0 180 0 0 0 chr10 20425657 20425677 -125163611 + (TA)n Simple_repeat Simple_repeat 2 21 0 34 24 0 0 chr10 20425767 20425808 -125163480 + AT_rich Low_complexity Low_complexity 1 41 0 2844 7 0 0 chr10 20426560 20426867 -125162421 - AluYb8 SINE Alu -11 307 1 645 199 0 0 chr10 20426971 20427122 -125162166 + (TG)n Simple_repeat Simple_repeat 1 151 0 2171 87 3 13 chr10 20427188 20427488 -125161800 + AluY SINE Alu 1 297 -14 1058 116 6 29 chr10 20427650 20427823 -125161465 - MER39 LTR ERV1 0 707 539 1470 198 7 10 chr10 20427882 20428170 -125161118 - MER39 LTR ERV1 -164 543 257 309 197 169 0 chr10 20428144 20428215 -125161073 - MER39 LTR ERV1 -574 133 51 * 1180 228 8 0 chr10 20429307 20429561 -125159727 + L1MB1 LINE L1 5884 6139 -29 1454 149 124 8 chr10 20429561 20429810 -125159478 + AluSg1 SINE Alu 1 278 -31 21 71 0 0 chr10 20429857 20429899 -125159389 + AT_rich Low_complexity Low_complexity 1 42 0 3803 219 30 22 chr10 20430585 20432046 -125157242 + L1MA9 LINE L1 4813 6274 -38 27 0 0 0 chr10 20432214 20432241 -125157047 + AT_rich Low_complexity Low_complexity 1 27 0 211 200 120 0 chr10 20432371 20432446 -125156842 - MIR SINE MIR -44 218 135 2347 56 20 20 chr10 20432518 20432823 -125156465 - AluY SINE Alu -6 305 1 1972 138 3 0 chr10 20434731 20435041 -125154247 - AluSx SINE Alu 0 311 1 194 0 39 0 chr10 20435697 20435723 -125153565 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 270 0 0 0 chr10 20436008 20436038 -125153250 + (TG)n Simple_repeat Simple_repeat 2 31 0 180 311 0 16 chr10 20437305 20437366 -125151922 - MIR SINE MIR -18 244 185 650 320 43 46 chr10 20437442 20437789 -125151499 - L2 LINE L2 -141 3172 2827 297 257 301 0 chr10 20437805 20437846 -125151442 + MER5B DNA MER1_type 1 28 -150 1751 142 50 3 chr10 20437846 20438163 -125151125 + L1PA16 LINE L1 5832 6163 -3 297 257 301 0 chr10 20438163 20438257 -125151031 + MER5B DNA MER1_type 28 177 -1 * 407 290 145 0 chr10 20438257 20438392 -125150896 - L2 LINE L2 -502 2812 2657 1683 250 57 38 chr10 20438416 20438964 -125150324 - MER90 LTR ERV1 -35 579 22 461 252 8 30 chr10 20438967 20439098 -125150190 - L2 LINE L2 -665 2649 2522 6820 218 28 54 chr10 20439119 20441909 -125147379 + L1MB3 LINE L1 3144 5870 -313 2151 108 3 14 chr10 20441909 20442197 -125147091 + AluSx SINE Alu 1 285 -27 6820 218 28 54 chr10 20442197 20442212 -125147076 + L1MB3 LINE L1 5870 5884 -299 21 0 0 0 chr10 20442215 20442236 -125147052 + AT_rich Low_complexity Low_complexity 1 21 0 1408 193 12 15 chr10 20442236 20442567 -125146721 + L1MB3 LINE L1 5854 6183 0 1414 242 29 27 chr10 20442588 20442964 -125146324 + MLT1E2 LTR MaLR 248 624 -2 452 283 79 14 chr10 20443015 20443305 -125145983 - L1MEc LINE L1 -4805 1591 1283 2109 133 7 0 chr10 20443466 20443768 -125145520 + AluJb SINE Alu 1 304 -8 195 129 0 0 chr10 20444034 20444065 -125145223 + (TA)n Simple_repeat Simple_repeat 1 31 0 643 283 242 11 chr10 20444709 20445073 -125144215 + L2 LINE L2 1501 1948 -1366 1165 167 133 21 chr10 20445081 20445321 -125143967 + Tigger7 DNA MER2_type 1 267 -2220 368 281 0 11 chr10 20445326 20445415 -125143873 + Tigger7 DNA MER2_type 2399 2486 -1 1253 257 126 16 chr10 20445418 20445870 -125143418 + L2 LINE L2 1961 2462 -852 2425 294 195 45 chr10 20445871 20447124 -125142164 + L2 LINE L2 1125 2188 -1125 1832 159 55 25 chr10 20447124 20447488 -125141800 - THE1C LTR MaLR 0 375 1 2425 294 195 45 chr10 20447488 20448129 -125141159 + L2 LINE L2 2188 3300 -13 185 0 40 0 chr10 20448130 20448155 -125141133 + (TGAA)n Simple_repeat Simple_repeat 2 27 0 554 64 51 0 chr10 20448222 20448300 -125140988 - AluSg/x SINE Alu -11 299 218 1885 268 19 29 chr10 20448331 20448854 -125140434 - LTR40a LTR ERVL -1 518 1 24 0 0 0 chr10 20449055 20449079 -125140209 + AT_rich Low_complexity Low_complexity 1 24 0 196 315 75 95 chr10 20449580 20449711 -125139577 + MIR SINE MIR 9 141 -121 2078 136 0 0 chr10 20449711 20450036 -125139252 + AluSx SINE Alu 1 325 0 1410 182 37 14 chr10 20450043 20450340 -125138948 + AluJb SINE Alu 1 304 -8 196 315 75 95 chr10 20450340 20450398 -125138890 + MIR SINE MIR 147 204 -58 234 0 0 0 chr10 20450838 20450864 -125138424 + (T)n Simple_repeat Simple_repeat 1 26 0 238 224 0 0 chr10 20451342 20451391 -125137897 + (TA)n Simple_repeat Simple_repeat 2 50 0 2213 101 0 3 chr10 20452018 20452306 -125136982 - AluSc SINE Alu -22 287 1 449 314 83 18 chr10 20453030 20453263 -125136025 + MIR SINE MIR 17 262 0 227 213 21 0 chr10 20453282 20453329 -125135959 + CT-rich Low_complexity Low_complexity 1 48 0 348 285 64 64 chr10 20455618 20455790 -125133498 - L2 LINE L2 -26 3287 3116 76 51 0 0 chr10 20456219 20456337 -125132951 + AT_rich Low_complexity Low_complexity 1 118 0 1734 167 25 48 chr10 20457567 20457686 -125131602 - MER44D DNA MER2_type -1884 603 483 2077 120 3 7 chr10 20457686 20457994 -125131294 - AluSx SINE Alu -5 307 1 1734 167 25 48 chr10 20457994 20458357 -125130931 - MER44D DNA MER2_type -2004 483 1 280 344 23 23 chr10 20458800 20458928 -125130360 + MER5A DNA MER1_type 34 161 -28 575 242 34 62 chr10 20458940 20459118 -125130170 + MER5B DNA MER1_type 6 178 0 22 0 0 0 chr10 20460241 20460263 -125129025 + AT_rich Low_complexity Low_complexity 1 22 0 219 329 71 41 chr10 20460423 20460629 -125128659 - MIR SINE MIR -30 232 27 1855 110 41 7 chr10 20461615 20461907 -125127381 + AluSx SINE Alu 11 312 0 2246 229 59 55 chr10 20462352 20463376 -125125912 - L1ME1 LINE L1 -92 6143 5125 1344 126 0 0 chr10 20463541 20463724 -125125564 - AluSg SINE Alu -127 183 1 2404 258 71 26 chr10 20463756 20464641 -125124647 - L1ME1 LINE L1 -5436 960 36 7329 139 7 2 chr10 20464775 20465938 -125123350 - HSMAR2 DNA Mariner -4 1298 70 219 124 105 19 chr10 20465940 20466045 -125123243 + (TATAA)n Simple_repeat Simple_repeat 2 115 0 469 135 52 21 chr10 20466048 20466144 -125123144 - HSMAR2 DNA Mariner -1202 100 2 256 315 23 23 chr10 20466278 20466300 -125122988 + CT-rich Low_complexity Low_complexity 2 23 -108 2170 134 3 0 chr10 20466300 20466607 -125122681 - AluSg SINE Alu -2 308 1 256 315 23 23 chr10 20466607 20466714 -125122574 + CT-rich Low_complexity Low_complexity 22 131 0 2545 64 0 3 chr10 20466856 20467167 -125122121 + AluY SINE Alu 1 310 -1 317 348 101 34 chr10 20467254 20467432 -125121856 + L2 LINE L2 2597 2786 -528 2180 98 24 0 chr10 20467725 20468012 -125121276 - AluSc SINE Alu -11 298 5 302 260 135 10 chr10 20468045 20468149 -125121139 + L2 LINE L2 3149 3265 -7 21 0 0 0 chr10 20468337 20468358 -125120930 + AT_rich Low_complexity Low_complexity 1 21 0 255 374 122 0 chr10 20468782 20468929 -125120359 - MIR3 SINE MIR -1 207 43 1602 183 44 3 chr10 20469621 20469916 -125119372 - AluJo SINE Alu -5 307 1 27 29 0 0 chr10 20571544 20571578 -125017710 + AT_rich Low_complexity Low_complexity 1 34 0 269 319 74 15 chr10 20571635 20571770 -125017518 - MIR SINE MIR -29 233 91 233 210 73 145 chr10 20571892 20572016 -125017272 - MER117 DNA MER1_type -1 196 82 2053 115 45 3 chr10 20572027 20572315 -125016973 + AluSx SINE Alu 1 300 -12 294 329 58 7 chr10 20573052 20573189 -125016099 + MIR SINE MIR 12 155 -107 25 0 0 0 chr10 20573262 20573287 -125016001 + AT_rich Low_complexity Low_complexity 1 25 0 275 270 56 0 chr10 20574051 20574140 -125015148 - MIR SINE MIR -16 246 153 761 309 49 10 chr10 20574359 20574666 -125014622 + MER46C DNA MER2_type 20 338 0 312 272 25 12 chr10 20574666 20574747 -125014541 - MIR SINE MIR -105 157 76 1885 142 22 0 chr10 20574794 20575093 -125014195 + AluSx SINE Alu 1 305 0 2262 93 10 16 chr10 20575618 20575928 -125013360 - AluY SINE Alu -3 308 1 1184 102 0 0 chr10 20576514 20576680 -125012608 - L1PA10 LINE L1 -4 6164 5999 428 331 141 0 chr10 20578018 20578281 -125011007 - L2 LINE L2 0 3313 3014 349 320 155 36 chr10 20578547 20578966 -125010322 - L2 LINE L2 -18 3295 2827 255 61 0 0 chr10 20579385 20579418 -125009870 + (CA)n Simple_repeat Simple_repeat 2 34 0 30 45 0 0 chr10 20579953 20579997 -125009291 + AT_rich Low_complexity Low_complexity 1 44 0 23 68 0 0 chr10 20580061 20580105 -125009183 + AT_rich Low_complexity Low_complexity 1 44 0 25 31 0 0 chr10 20580146 20580178 -125009110 + AT_rich Low_complexity Low_complexity 1 32 0 42 36 0 0 chr10 20580612 20580668 -125008620 + AT_rich Low_complexity Low_complexity 1 56 0 5990 187 100 70 chr10 20580728 20581286 -125008002 - L1MC3 LINE L1 -18 7767 7228 284 267 0 0 chr10 20581286 20581361 -125007927 - MLT1F1 LTR MaLR -458 109 35 5990 187 100 70 chr10 20581361 20582522 -125006766 - L1MC3 LINE L1 -557 7228 5919 248 234 39 0 chr10 20582742 20582819 -125006469 + T-rich Low_complexity Low_complexity 3 82 0 23 0 0 0 chr10 20583013 20583036 -125006252 + AT_rich Low_complexity Low_complexity 1 23 0 2498 179 37 76 chr10 20583568 20584238 -125005050 - L1MB3 LINE L1 -115 6068 5425 47 33 0 0 chr10 20584613 20584674 -125004614 + AT_rich Low_complexity Low_complexity 1 61 0 1444 189 7 30 chr10 20584759 20585056 -125004232 + AluJo SINE Alu 1 290 -22 38701 73 16 2 chr10 20585856 20591852 -124997436 - L1PA5 LINE L1 -2 6152 79 1127 156 7 0 chr10 20592598 20597818 -124991470 + ALR/Alpha Satellite centromeric 1 5252 -31 34 108 0 0 chr10 20598259 20598398 -124990890 + AT_rich Low_complexity Low_complexity 1 139 0 1823 107 0 0 chr10 20598722 20598965 -124990323 - AluSc SINE Alu -10 299 57 2351 151 32 53 chr10 20599113 20599255 -124990033 - MER65C LTR ERV1 0 461 317 815 147 7 0 chr10 20599255 20599391 -124989897 + L1PA15 LINE L1 6016 6152 -13 2351 151 32 53 chr10 20599391 20599719 -124989569 - MER65C LTR ERV1 -144 317 1 1966 155 5 47 chr10 20600210 20600590 -124988698 - MLT1A1 LTR MaLR 0 365 2 721 264 83 25 chr10 20602374 20602616 -124986672 + MIR SINE MIR 7 262 0 1046 214 39 18 chr10 20602802 20603083 -124986205 + L1MB8 LINE L1 5890 6176 -2 1199 144 0 83 chr10 20603093 20603141 -124986147 + AluJo SINE Alu 83 133 -179 1965 139 3 3 chr10 20603141 20603436 -124985852 + AluSx SINE Alu 1 295 -17 1199 144 0 83 chr10 20603436 20603616 -124985672 + AluJo SINE Alu 133 292 -20 376 84 14 14 chr10 20603952 20604023 -124985265 + (TA)n Simple_repeat Simple_repeat 2 72 0 310 186 17 0 chr10 20604032 20604091 -124985197 - Tigger5 DNA MER2_type 0 2323 2264 242 191 0 0 chr10 20604111 20604153 -124985135 - Tigger5 DNA MER2_type -2268 55 14 350 219 14 14 chr10 20604154 20604227 -124985061 - Tigger5 DNA MER2_type 0 2323 2251 290 273 0 0 chr10 20604196 20604251 -124985037 - Tigger5 DNA MER2_type -2268 55 1 * 354 45 0 0 chr10 20604253 20604297 -124984991 + (CA)n Simple_repeat Simple_repeat 1 44 0 632 320 17 22 chr10 20604954 20605185 -124984103 + MIR SINE MIR 17 246 -16 1158 107 0 0 chr10 20606297 20606486 -124982802 - AluSc SINE Alu 0 320 132 2345 191 63 2 chr10 20606834 20607279 -124982009 - MER70A LTR ERVL 0 472 1 21 36 0 0 chr10 20607411 20607439 -124981849 + AT_rich Low_complexity Low_complexity 1 28 0 242 311 27 0 chr10 20608198 20608272 -124981016 + MLT1I LTR MaLR 115 190 -219 204 125 0 0 chr10 20608439 20608471 -124980817 + (TA)n Simple_repeat Simple_repeat 1 32 0 47 53 0 0 chr10 20609299 20609374 -124979914 + AT_rich Low_complexity Low_complexity 1 75 0 1529 163 31 16 chr10 20611117 20611375 -124977913 + AluJb SINE Alu 6 267 -45 1872 237 59 7 chr10 20611710 20612149 -124977139 + MER74A LTR ERVL 97 558 0 29 0 0 0 chr10 20612691 20612720 -124976568 + AT_rich Low_complexity Low_complexity 1 29 0 6236 157 20 19 chr10 20612720 20613100 -124976188 - L1PB1 LINE L1 -1 6150 5772 342 0 0 0 chr10 20613100 20613138 -124976150 + (TG)n Simple_repeat Simple_repeat 2 39 0 6236 157 20 19 chr10 20613138 20614910 -124974378 - L1PB1 LINE L1 -379 5772 3999 1511 201 17 10 chr10 20615087 20615375 -124973913 - AluJb SINE Alu -22 290 1 372 279 85 78 chr10 20615494 20615988 -124973300 - L1M4 LINE L1 -653 5521 5015 1320 200 3 40 chr10 20615997 20616201 -124973087 - MLT1B LTR MaLR -4 386 195 1608 159 125 6 chr10 20616201 20616369 -124972919 - MER46B DNA MER2_type -2498 233 108 22 35 0 0 chr10 20616369 20616398 -124972890 + AT_rich Low_complexity Low_complexity 1 29 0 1608 159 125 6 chr10 20616398 20616521 -124972767 - MER46B DNA MER2_type -2623 108 1 1320 200 3 40 chr10 20616521 20616616 -124972672 - MLT1B LTR MaLR -195 195 98 2260 79 0 4 chr10 20616619 20616899 -124972389 + AluY SINE Alu 1 279 -32 459 45 0 0 chr10 20616899 20616965 -124972323 + AluY SINE Alu 241 306 -4 545 232 7 53 chr10 20617002 20617153 -124972135 - MLT1B LTR MaLR -246 144 1 38 0 0 0 chr10 20617320 20617358 -124971930 + AT_rich Low_complexity Low_complexity 1 38 0 2137 130 0 0 chr10 20617348 20617640 -124971648 - AluSx SINE Alu -20 292 1 29 0 0 0 chr10 20618481 20618510 -124970778 + AT_rich Low_complexity Low_complexity 1 29 0 525 259 35 24 chr10 20618535 20618705 -124970583 + MER5B DNA MER1_type 3 174 -4 471 243 78 66 chr10 20619069 20619312 -124969976 - Charlie2 DNA MER1_type -634 2228 1983 9212 192 43 19 chr10 20619322 20622465 -124966823 - L1MA10 LINE L1 -2 6332 3114 189 220 0 51 chr10 20622660 20622719 -124966569 + MIR SINE MIR 175 230 -32 188 289 0 0 chr10 20622686 20622738 -124966550 + L2 LINE L2 3202 3253 -19 * 4677 164 23 20 chr10 20622768 20623651 -124965637 - L1MB3 LINE L1 -7 6176 5292 22 88 0 0 chr10 20624080 20624137 -124965151 + AT_rich Low_complexity Low_complexity 1 57 0 368 330 64 12 chr10 20624369 20624542 -124964746 - MIR SINE MIR -15 247 66 2458 56 0 0 chr10 20624591 20624878 -124964410 + AluY SINE Alu 1 287 -24 557 366 98 0 chr10 20625835 20626081 -124963207 + MER115 DNA AcHobo 57 326 -367 281 26 0 26 chr10 20626915 20626954 -124962334 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 2425 199 20 66 chr10 20626973 20627576 -124961712 - LTR9 LTR ERV1 0 612 38 313 289 56 38 chr10 20628888 20629086 -124960202 + MIR SINE MIR 15 255 -7 576 244 154 56 chr10 20629126 20629450 -124959838 - MLT1J2 LTR MaLR -23 427 72 194 271 140 56 chr10 20629737 20629844 -124959444 - L2 LINE L2 -1030 2284 2169 197 189 151 19 chr10 20630665 20630718 -124958570 + MER5A DNA MER1_type 120 179 -10 5022 184 117 9 chr10 20631868 20632110 -124957178 + L1PA16 LINE L1 4124 4339 -1827 402 21 0 0 chr10 20632110 20632157 -124957131 + (CA)n Simple_repeat Simple_repeat 2 48 0 5022 184 117 9 chr10 20632157 20633742 -124955546 + L1PA16 LINE L1 4339 6157 -9 3981 146 3 13 chr10 20634125 20634798 -124954490 + L1PB3 LINE L1 5488 6153 -1 2451 54 0 7 chr10 20634819 20635117 -124954171 + AluY SINE Alu 1 296 -15 353 269 91 88 chr10 20635133 20635441 -124953847 + L1ME4a LINE L1 5546 5854 -267 26 30 0 0 chr10 20636966 20636999 -124952289 + AT_rich Low_complexity Low_complexity 1 33 0 203 275 165 0 chr10 20640769 20640860 -124948428 - L2 LINE L2 -778 2536 2431 21 71 0 0 chr10 20641621 20641663 -124947625 + AT_rich Low_complexity Low_complexity 1 42 0 539 307 119 59 chr10 20641777 20642266 -124947022 - MLT1H1 LTR MaLR 0 555 38 30 27 0 0 chr10 20642409 20642446 -124946842 + AT_rich Low_complexity Low_complexity 1 37 0 1474 188 9 32 chr10 20642448 20642789 -124946499 - L1MB3 LINE L1 -10 6173 5841 2168 95 7 20 chr10 20642985 20643290 -124945998 + AluSg SINE Alu 1 301 -9 6513 211 31 19 chr10 20643442 20644436 -124944852 + L1PA12 LINE L1 2117 3097 -4487 2025 158 0 0 chr10 20644436 20644734 -124944554 - AluSx SINE Alu -14 298 1 6513 211 31 19 chr10 20644734 20646086 -124943202 + L1PA12 LINE L1 3097 4497 -3087 1341 206 39 52 chr10 20648804 20649134 -124940154 + MLT2D LTR ERVL 89 414 0 23 0 0 0 chr10 20649248 20649271 -124940017 + AT_rich Low_complexity Low_complexity 1 23 0 1562 205 43 0 chr10 20649335 20649662 -124939626 - L1 LINE L1 -2261 3885 3545 351 286 53 21 chr10 20649769 20650017 -124939271 + L1 LINE L1 4806 5059 -1087 697 249 60 90 chr10 20650277 20650642 -124938646 - L2 LINE L2 -1 3312 2959 592 243 47 24 chr10 20650664 20650833 -124938455 - MER20 DNA MER1_type -1 218 46 1663 132 20 0 chr10 20651207 20651457 -124937831 + AluJb SINE Alu 1 255 -57 327 49 0 0 chr10 20651470 20651511 -124937777 + (GAAAA)n Simple_repeat Simple_repeat 3 43 0 28 99 0 0 chr10 20651642 20651733 -124937555 + AT_rich Low_complexity Low_complexity 1 91 0 24 91 0 0 chr10 20651922 20651988 -124937300 + AT_rich Low_complexity Low_complexity 1 66 0 214 296 0 0 chr10 20653300 20653354 -124935934 - L2 LINE L2 -5 3267 3214 244 265 140 29 chr10 20653611 20653747 -124935541 - MIR SINE MIR -92 170 20 216 224 0 0 chr10 20654026 20654093 -124935195 + (CA)n Simple_repeat Simple_repeat 2 68 0 2923 6 0 0 chr10 20654122 20654439 -124934849 - AluYb8 SINE Alu -1 317 1 237 266 0 0 chr10 20654501 20654595 -124934693 + GA-rich Low_complexity Low_complexity 3 96 0 1721 171 60 37 chr10 20654706 20655087 -124934201 + MLT1B LTR MaLR 1 390 0 866 226 6 6 chr10 20655363 20655540 -124933748 - MER5B DNA MER1_type -1 177 1 316 318 70 16 chr10 20655687 20655816 -124933472 + HAL1 LINE L1 818 953 -1554 259 259 12 0 chr10 20656041 20656122 -124933166 + (TA)n Simple_repeat Simple_repeat 2 83 0 559 246 47 47 chr10 20656184 20656314 -124932974 + L1MC5 LINE L1 7701 7833 -128 2044 180 56 15 chr10 20656314 20656725 -124932563 - MSTA LTR MaLR 0 428 1 559 246 47 47 chr10 20656725 20656826 -124932462 + L1MC5 LINE L1 7832 7932 -29 464 243 62 66 chr10 20657345 20657604 -124931684 - L2 LINE L2 0 3313 3056 183 354 10 21 chr10 20657760 20657856 -124931432 - MIR SINE MIR -8 254 160 1327 197 62 0 chr10 20657964 20658269 -124931019 + MER33 DNA MER1_type 1 324 0 504 304 108 27 chr10 20658592 20658964 -124930324 - MER93a LTR ERV1 0 402 1 1615 315 43 38 chr10 20658965 20659264 -124930024 - MER93a-int LTR ERV1 -395 7142 6846 6252 113 29 18 chr10 20659264 20660222 -124929066 - LTR5 LTR ERVK 0 969 1 1615 315 43 38 chr10 20660222 20660836 -124928452 - MER93a-int LTR ERV1 -691 6846 6225 1072 233 32 109 chr10 20661300 20661704 -124927584 - MER93a-int LTR ERV1 -1341 6196 5824 3209 229 50 77 chr10 20662031 20662544 -124926744 - MER93a-int LTR ERV1 -1497 3439 2913 1952 175 62 52 chr10 20662544 20662915 -124926373 + MSTB LTR MaLR 1 378 -48 2416 76 0 0 chr10 20662915 20663216 -124926072 + AluY SINE Alu 1 301 -10 1952 175 62 52 chr10 20663216 20663266 -124926022 + MSTB LTR MaLR 378 426 0 3209 229 50 77 chr10 20663266 20664838 -124924450 - MER93a-int LTR ERV1 -2023 2913 1916 275 186 0 0 chr10 20664901 20664944 -124924344 - MER34 LTR ERV1 0 542 500 394 179 49 81 chr10 20664952 20665003 -124924285 - MER34 LTR ERV1 -288 254 203 2322 84 0 34 chr10 20665003 20665325 -124923963 - AluY SINE Alu 0 311 1 394 179 49 81 chr10 20665325 20665396 -124923892 - MER34 LTR ERV1 -339 203 136 283 273 40 0 chr10 20665398 20665497 -124923791 - MER93a-int LTR ERV1 -2477 2394 2292 1097 226 65 42 chr10 20665519 20665952 -124923336 - MER93a-int LTR ERV1 -3470 1466 1024 519 196 5 38 chr10 20666072 20666256 -124923032 + CT-rich Low_complexity Low_complexity 3 180 0 394 291 0 28 chr10 20666333 20666474 -124922814 - MER34C LTR ERV1 -155 430 294 594 266 107 52 chr10 20667127 20667360 -124921928 - MER93a-int LTR ERV1 -7289 248 3 577 287 71 45 chr10 20667367 20667747 -124921541 - MER93a LTR ERV1 -12 390 1 1275 203 40 47 chr10 20668939 20669240 -124920048 + AluJb SINE Alu 3 301 -11 367 329 129 6 chr10 20669527 20669697 -124919591 - MIR SINE MIR -71 191 1 21 0 0 0 chr10 20670909 20670930 -124918358 + AT_rich Low_complexity Low_complexity 1 21 0 1133 201 7 26 chr10 20671748 20672021 -124917267 - L1MCb LINE L1 -5077 968 701 584 283 12 12 chr10 20672125 20672298 -124916990 - MIR SINE MIR -78 184 12 766 231 61 38 chr10 20672512 20672724 -124916564 - MIR SINE MIR -44 218 2 2066 99 35 3 chr10 20673652 20673936 -124915352 + AluSx SINE Alu 1 293 -19 2044 118 0 43 chr10 20674328 20674672 -124914616 - AluSp SINE Alu 0 313 1 22 35 0 0 chr10 20675814 20675843 -124913445 + AT_rich Low_complexity Low_complexity 1 29 0 1058 225 46 26 chr10 20676288 20676595 -124912693 + MER119 DNA MER1_type 157 469 -114 2240 105 0 0 chr10 20677770 20678075 -124911213 + AluSc SINE Alu 1 305 -4 2233 217 71 12 chr10 20678154 20678716 -124910572 + L1MCa LINE L1 1 595 -5831 254 260 41 0 chr10 20678720 20678793 -124910495 + L1MCa LINE L1 2088 2163 -4263 * 701 242 73 45 chr10 20678792 20679378 -124909910 + L1MCa LINE L1 2116 2719 -3707 680 193 80 0 chr10 20679364 20679551 -124909737 + L1M4 LINE L1 4487 4688 -1458 * 756 194 32 11 chr10 20679552 20679738 -124909550 + L1MC2 LINE L1 6149 6338 -6 410 94 60 0 chr10 20679779 20679896 -124909392 + (TA)n Simple_repeat Simple_repeat 1 124 0 395 281 76 12 chr10 20680561 20680732 -124908556 - MIR SINE MIR 0 262 81 2000 123 0 4 chr10 20680785 20681062 -124908226 - AluSg SINE Alu -30 280 5 21 0 0 0 chr10 20681351 20681372 -124907916 + AT_rich Low_complexity Low_complexity 1 21 0 2071 165 89 2 chr10 20681958 20682352 -124906936 - MSTA LTR MaLR 0 428 1 472 249 58 75 chr10 20682364 20682605 -124906683 + MLT1K LTR MaLR 194 430 -158 241 320 104 41 chr10 20683181 20683380 -124905908 + L1ME4a LINE L1 5478 5663 -458 2124 95 3 0 chr10 20683380 20683696 -124905592 - AluSg SINE Alu 0 317 1 241 320 104 41 chr10 20683696 20683860 -124905428 + L1ME4a LINE L1 5663 5865 -256 287 221 70 0 chr10 20683971 20684057 -124905231 - L1MC4 LINE L1 -1337 6705 6614 343 291 45 34 chr10 20684078 20684257 -124905031 + L1ME4a LINE L1 5935 6115 -6 684 307 87 63 chr10 20684593 20684863 -124904425 + LTR33A LTR ERVL 23 310 -213 469 46 0 0 chr10 20684863 20684928 -124904360 - L1PA6 LINE L1 0 6154 6090 684 307 87 63 chr10 20684928 20685103 -124904185 + LTR33A LTR ERVL 310 479 -44 181 0 69 0 chr10 20685240 20685269 -124904019 + (CATTA)n Simple_repeat Simple_repeat 5 35 0 330 357 91 32 chr10 20685409 20685800 -124903488 - L2 LINE L2 -230 3083 2640 836 191 169 0 chr10 20685822 20686011 -124903277 - MLT1A1 LTR MaLR 0 365 145 241 232 259 9 chr10 20686014 20686126 -124903162 + L2 LINE L2 2946 3085 -228 785 143 41 7 chr10 20686253 20686400 -124902888 - MLT1A1 LTR MaLR -213 152 1 571 309 77 9 chr10 20687647 20687867 -124901421 - MIR SINE MIR -26 236 2 1356 181 15 15 chr10 20688190 20688365 -124900923 - AluJb SINE Alu -3 309 132 396 103 0 0 chr10 20688365 20688423 -124900865 + (TG)n Simple_repeat Simple_repeat 1 58 0 1356 181 15 15 chr10 20688423 20688517 -124900771 - AluJb SINE Alu -179 133 40 819 148 0 16 chr10 20689348 20689476 -124899812 + FLAM_C SINE Alu 3 128 -15 40 59 0 0 chr10 20690899 20690967 -124898321 + AT_rich Low_complexity Low_complexity 1 68 0 273 360 12 0 chr10 20691318 20691479 -124897809 - L1M4 LINE L1 -3600 2546 2384 433 188 20 20 chr10 20691554 20691655 -124897633 + LTR56 LTR ERV1 1 101 -344 545 216 10 0 chr10 20691663 20691765 -124897523 - AluJb SINE Alu -77 235 133 1461 214 3 34 chr10 20691765 20692087 -124897201 - AluJb SINE Alu 0 312 1 2041 127 20 6 chr10 20692087 20692434 -124896854 + LTR56 LTR ERV1 94 445 0 1940 151 7 0 chr10 20692703 20693001 -124896287 - AluSq SINE Alu -13 300 1 1711 182 38 58 chr10 20693467 20693863 -124895425 - MLT1B LTR MaLR -2 388 1 399 249 35 81 chr10 20693950 20694147 -124895141 - HAL1 LINE L1 -899 1608 1421 336 316 158 27 chr10 20694352 20694681 -124894607 - HAL1 LINE L1 -1319 1188 817 225 0 0 0 chr10 20696300 20696325 -124892963 + (T)n Simple_repeat Simple_repeat 1 25 0 773 174 0 27 chr10 20696325 20696474 -124892814 + Tigger1 DNA MER2_type 55 199 -2219 2096 125 7 0 chr10 20696475 20696780 -124892508 - AluSq SINE Alu -6 307 1 4106 134 30 30 chr10 20697048 20697774 -124891514 + Tigger1 DNA MER2_type 192 917 -1501 2848 144 40 6 chr10 20697753 20698233 -124891055 + Tigger1 DNA MER2_type 1920 2415 -3 * 334 356 59 0 chr10 20698243 20698378 -124890910 - MIR3 SINE MIR -61 147 5 5122 99 45 6 chr10 20698816 20699725 -124889563 - L1PA13 LINE L1 -4 6159 5214 6584 181 32 4 chr10 20699734 20701036 -124888252 - L1PA13 LINE L1 -1645 4501 3163 22 56 0 0 chr10 20701174 20701210 -124888078 + AT_rich Low_complexity Low_complexity 1 36 0 287 196 0 20 chr10 20702339 20702390 -124886898 + L3 LINE CR1 1517 1566 -11 623 296 25 20 chr10 20702413 20702609 -124886679 - L2 LINE L2 -1 3312 3116 1182 166 30 21 chr10 20702609 20702844 -124886444 - MSTB LTR MaLR 0 426 190 5511 78 23 18 chr10 20702865 20703634 -124885654 - L1PA10 LINE L1 -4 6164 5392 1024 154 126 0 chr10 20703640 20703815 -124885473 - MSTB LTR MaLR -229 197 1 389 336 77 40 chr10 20703815 20704150 -124885138 - L2 LINE L2 -193 3120 2778 6149 226 81 40 chr10 20704578 20707380 -124881908 - L1MC2 LINE L1 -1 6623 3939 2045 125 4 0 chr10 20707380 20707692 -124881596 + AluSx SINE Alu 1 313 0 6149 226 81 40 chr10 20707692 20708055 -124881233 - L1MC2 LINE L1 -2685 3939 3592 6747 55 8 21 chr10 20708055 20708665 -124880623 + L1PA7 LINE L1 5078 5673 -481 2157 110 0 10 chr10 20708665 20708974 -124880314 + AluSc SINE Alu 1 306 -3 6747 55 8 21 chr10 20708974 20709444 -124879844 + L1PA7 LINE L1 5673 6148 -6 6149 226 81 40 chr10 20709444 20710029 -124879259 - L1MC2 LINE L1 -3032 3592 2708 240 246 33 0 chr10 20710052 20710113 -124879175 - MLT1A1 LTR MaLR -6 359 297 2272 223 11 113 chr10 20710124 20710495 -124878793 - L1MC2 LINE L1 -5716 710 303 2134 90 4 0 chr10 20710495 20710772 -124878516 + AluSg1 SINE Alu 1 278 -31 600 50 0 0 chr10 20710772 20710852 -124878436 + (TAGA)n Simple_repeat Simple_repeat 1 80 0 2272 223 11 113 chr10 20710852 20711133 -124878155 - L1MC2 LINE L1 -6122 304 146 1673 152 58 36 chr10 20711133 20711463 -124877825 + MER1B DNA MER1_type 1 337 0 2272 223 11 113 chr10 20711463 20711588 -124877700 - L1MC2 LINE L1 -6280 146 10 1458 155 174 35 chr10 20712265 20712639 -124876649 + MSTB LTR MaLR 1 426 0 21 57 0 0 chr10 20712772 20712807 -124876481 + AT_rich Low_complexity Low_complexity 1 35 0 1916 87 36 71 chr10 20714608 20714917 -124874371 - AluY SINE Alu -13 298 1 241 130 19 19 chr10 20715129 20715183 -124874105 + (TA)n Simple_repeat Simple_repeat 2 55 0 261 0 0 0 chr10 20716796 20716825 -124872463 + (TTG)n Simple_repeat Simple_repeat 2 30 0 188 283 192 17 chr10 20716996 20717116 -124872172 + L2 LINE L2 772 912 -2402 226 284 11 45 chr10 20717317 20717405 -124871883 - MIR SINE MIR -27 235 151 21 71 0 0 chr10 20718072 20718114 -124871174 + AT_rich Low_complexity Low_complexity 1 42 0 205 37 37 56 chr10 20718115 20718169 -124871119 + (TTA)n Simple_repeat Simple_repeat 1 53 0 278 226 48 0 chr10 20718195 20718319 -124870969 + (TA)n Simple_repeat Simple_repeat 2 131 0 1655 232 68 18 chr10 20721034 20721474 -124867814 + MLT1C LTR MaLR 6 467 0 341 283 20 10 chr10 20722699 20722798 -124866490 + L2 LINE L2 3208 3307 -6 473 291 91 17 chr10 20723032 20723207 -124866081 + MIR3 SINE MIR 19 206 -2 771 244 0 6 chr10 20723554 20723710 -124865578 - MER8 DNA MER2_type 0 239 85 559 258 0 0 chr10 20723711 20723831 -124865457 + MER63 DNA MER1_type 673 792 -270 318 26 0 0 chr10 20723937 20723976 -124865312 + (CA)n Simple_repeat Simple_repeat 1 39 0 312 220 40 40 chr10 20724447 20724547 -124864741 - LTR67 LTR ERVL -21 536 437 204 208 38 0 chr10 20726168 20726221 -124863067 + (TA)n Simple_repeat Simple_repeat 2 56 0 * 208 151 0 57 chr10 20726186 20726239 -124863049 + (TATAA)n Simple_repeat Simple_repeat 3 52 0 1913 143 0 0 chr10 20726865 20727130 -124862158 + AluSx SINE Alu 3 267 -45 22 0 0 0 chr10 20728599 20728621 -124860667 + AT_rich Low_complexity Low_complexity 1 22 0 42771 35 21 2 chr10 20729646 20735706 -124853582 - L1PA3 LINE L1 0 6155 2 1916 150 0 0 chr10 20737114 20737394 -124851894 - AluSx SINE Alu -30 282 3 374 57 19 0 chr10 20737630 20737683 -124851605 + (TAGA)n Simple_repeat Simple_repeat 2 55 0 593 121 61 0 chr10 20738702 20738867 -124850421 + (TA)n Simple_repeat Simple_repeat 2 176 0 216 67 0 0 chr10 20739155 20739185 -124850103 + (TG)n Simple_repeat Simple_repeat 1 30 0 2421 136 36 45 chr10 20739188 20739658 -124849630 - L1MC1 LINE L1 -11 6322 5857 1933 140 10 7 chr10 20739940 20740247 -124849041 - AluSq SINE Alu -1 312 5 947 269 87 39 chr10 20740594 20741007 -124848281 - LTR16A LTR ERVL 0 450 18 516 32 0 0 chr10 20741182 20741244 -124848044 + (CA)n Simple_repeat Simple_repeat 2 63 0 239 269 37 90 chr10 20742247 20742381 -124846907 + MIR3 SINE MIR 77 203 -5 4713 102 7 1 chr10 20742758 20743444 -124845844 + L1PB2 LINE L1 5460 6149 -2 364 262 101 40 chr10 20744424 20744573 -124844715 + MIR SINE MIR 49 206 -56 29 0 0 0 chr10 20744740 20744769 -124844519 + AT_rich Low_complexity Low_complexity 1 29 0 1767 166 3 32 chr10 20744901 20745215 -124844073 + AluJo SINE Alu 1 305 -7 649 196 0 12 chr10 20745216 20745379 -124843909 + GA-rich Low_complexity Low_complexity 2 162 0 191 300 69 46 chr10 20746036 20746166 -124843122 - L2 LINE L2 0 3313 3181 228 319 14 0 chr10 20746231 20746300 -124842988 + L1ME2 LINE L1 6008 6077 -87 994 217 14 14 chr10 20746700 20746917 -124842371 + U3 snRNA snRNA 1 217 0 600 346 101 23 chr10 20746927 20747583 -124841705 - L2 LINE L2 -834 2480 1774 221 179 0 0 chr10 20747890 20747929 -124841359 + A-rich Low_complexity Low_complexity 1 39 0 459 329 26 0 chr10 20748320 20748475 -124840813 - LTR33 LTR ERVL -360 161 3 196 307 69 30 chr10 20748742 20748843 -124840445 + MIR SINE MIR 114 218 -44 1466 219 23 13 chr10 20749329 20749635 -124839653 - AluJo SINE Alu -3 309 1 25 31 0 0 chr10 20749635 20749667 -124839621 + AT_rich Low_complexity Low_complexity 1 32 0 24 0 0 0 chr10 20749925 20749949 -124839339 + AT_rich Low_complexity Low_complexity 1 24 0 262 294 0 11 chr10 20750385 20750477 -124838811 + (TA)n Simple_repeat Simple_repeat 2 92 0 3676 144 31 69 chr10 20750494 20750650 -124838638 + Tigger1 DNA MER2_type 1 161 -2257 7342 43 4 0 chr10 20750650 20752150 -124837138 - L1PA5 LINE L1 -1 6153 4651 3676 144 31 69 chr10 20752150 20752701 -124836587 + Tigger1 DNA MER2_type 161 681 -1737 2092 142 12 6 chr10 20752838 20753182 -124836106 + Tigger1 DNA MER2_type 714 1059 -1359 847 208 0 6 chr10 20753213 20753381 -124835907 + Tigger1 DNA MER2_type 2252 2418 0 1849 133 13 41 chr10 20753603 20753919 -124835369 - AluSx SINE Alu -3 309 3 213 94 0 0 chr10 20753925 20753957 -124835331 + (T)n Simple_repeat Simple_repeat 1 32 0 25 0 0 0 chr10 20754091 20754116 -124835172 + AT_rich Low_complexity Low_complexity 1 25 0 1171 202 40 21 chr10 20755665 20755999 -124833289 - MLT1B LTR MaLR 0 390 4 210 118 0 0 chr10 20758394 20758428 -124830860 + (ATG)n Simple_repeat Simple_repeat 2 35 0 1737 175 31 8 chr10 20758535 20758890 -124830398 - L1MA6 LINE L1 0 6300 5938 643 292 59 9 chr10 20759175 20759394 -124829894 + MIR SINE MIR 26 255 -7 202 174 43 0 chr10 20759421 20759467 -124829821 + GA-rich Low_complexity Low_complexity 3 50 0 1973 148 107 18 chr10 20761017 20761408 -124827880 - MSTA LTR MaLR -2 426 1 352 330 140 61 chr10 20761692 20762164 -124827124 + L2 LINE L2 2235 2743 -571 469 266 203 10 chr10 20762549 20762756 -124826532 - MIR SINE MIR -9 253 7 258 180 0 0 chr10 20762928 20762978 -124826310 + L1MA5 LINE L1 6251 6300 0 1430 123 8 0 chr10 20763452 20763687 -124825601 + L1MA5A LINE L1 6059 6295 -2 1663 197 10 7 chr10 20763689 20763989 -124825299 + AluJo SINE Alu 1 301 -11 37 39 0 0 chr10 20764014 20764065 -124825223 + AT_rich Low_complexity Low_complexity 1 51 0 21 0 0 0 chr10 20764610 20764631 -124824657 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 20764774 20764795 -124824493 + AT_rich Low_complexity Low_complexity 1 21 0 295 98 48 17 chr10 20766364 20766428 -124822860 + L1PA13 LINE L1 6065 6129 -34 5493 121 8 4 chr10 20766466 20767302 -124821986 - L1PA13 LINE L1 -55 6108 5269 324 332 98 59 chr10 20767419 20767705 -124821583 + L2 LINE L2 2056 2352 -962 235 185 169 0 chr10 20767979 20768044 -124821244 + Charlie2 DNA MER1_type 2228 2303 -559 595 152 98 9 chr10 20768481 20768622 -124820666 + AluJb SINE Alu 161 311 0 624 260 121 26 chr10 20768633 20768756 -124820532 + Charlie2 DNA MER1_type 2442 2552 -310 1349 118 74 22 chr10 20768756 20768985 -124820303 - L1PA15 LINE L1 0 6165 5925 624 260 121 26 chr10 20768985 20769242 -124820046 + Charlie2 DNA MER1_type 2552 2858 -4 26 30 0 0 chr10 20769835 20769868 -124819420 + AT_rich Low_complexity Low_complexity 1 33 0 22 35 0 0 chr10 20769927 20769956 -124819332 + AT_rich Low_complexity Low_complexity 1 29 0 280 318 60 34 chr10 20770124 20770473 -124818815 + HAL1b LINE L1 67 424 -924 377 293 131 41 chr10 20770499 20771201 -124818087 + L1MC/D LINE L1 3893 4657 -1489 364 329 35 48 chr10 20771409 20771640 -124817648 + L1MC/D LINE L1 4807 5034 -1112 2422 177 22 84 chr10 20771994 20772541 -124816747 - MLT2B2 LTR ERVL -2 513 1 984 248 138 21 chr10 20772546 20772929 -124816359 + L1MC/D LINE L1 5373 5800 -2008 2148 123 6 22 chr10 20773201 20773517 -124815771 + AluSx SINE Alu 1 311 -1 704 227 71 0 chr10 20773538 20773679 -124815609 + FRAM SINE Alu 1 151 -15 233 372 41 8 chr10 20773686 20773807 -124815481 - MIR SINE MIR -128 134 10 229 360 12 12 chr10 20774155 20774241 -124815047 + MIR SINE MIR 29 114 -148 795 316 78 73 chr10 20774879 20776052 -124813236 + L1ME LINE L1 4046 5224 -922 1780 127 12 82 chr10 20776073 20776404 -124812884 + AluSx SINE Alu 1 308 -4 401 312 66 68 chr10 20776593 20777032 -124812256 + L1ME LINE L1 5321 5758 -363 5929 108 31 4 chr10 20779615 20780590 -124808698 - L1PA13 LINE L1 -11 6152 5167 518 333 93 35 chr10 20780608 20781059 -124808229 - LTR33 LTR ERVL -1 520 44 2095 136 3 0 chr10 20781567 20781861 -124807427 + AluSx SINE Alu 1 295 -17 593 156 0 90 chr10 20782299 20782421 -124806867 - 5S rRNA rRNA -1 120 10 2074 143 0 6 chr10 20782444 20782758 -124806530 - AluSx SINE Alu 0 312 1 180 0 0 0 chr10 20783435 20783455 -124805833 + (CAA)n Simple_repeat Simple_repeat 2 21 0 262 271 6 73 chr10 20784108 20784285 -124805003 + L1MEd LINE L1 977 1141 -4978 28 48 0 0 chr10 20784478 20784520 -124804768 + AT_rich Low_complexity Low_complexity 1 42 0 853 167 0 0 chr10 20784525 20784663 -124804625 - AluSg/x SINE Alu -19 291 154 2228 118 0 0 chr10 20785153 20785450 -124803838 + AluSx SINE Alu 1 297 -15 2446 90 0 0 chr10 20786355 20786665 -124802623 + AluSq SINE Alu 1 310 -3 2159 114 3 7 chr10 20788617 20788923 -124800365 - AluSq SINE Alu -6 307 3 22 35 0 0 chr10 20789027 20789056 -124800232 + AT_rich Low_complexity Low_complexity 1 29 0 2073 98 0 46 chr10 20791686 20791992 -124797296 + AluSq SINE Alu 1 292 -21 1083 282 144 2 chr10 20792304 20792726 -124796562 + LTR33 LTR ERVL 32 513 -8 196 382 0 0 chr10 20793405 20793460 -124795828 - MIR SINE MIR -167 95 41 6165 41 1 0 chr10 20793765 20794513 -124794775 + L1PA4 LINE L1 5406 6154 -1 29 28 0 0 chr10 20794529 20794565 -124794723 + AT_rich Low_complexity Low_complexity 1 36 0 2096 124 0 3 chr10 20794944 20795242 -124794046 + AluSx SINE Alu 1 297 -15 248 279 38 25 chr10 20795316 20795395 -124793893 + L2 LINE L2 3232 3311 -2 307 242 113 57 chr10 20796108 20796232 -124793056 + MER94 DNA DNA 1 131 -3 605 304 12 21 chr10 20796387 20796627 -124792661 + L1MEc LINE L1 779 1016 -6122 559 238 28 18 chr10 20797355 20797367 -124791921 + L1MEc LINE L1 1538 1548 -5470 6159 87 24 2 chr10 20797367 20798645 -124790643 - L1PA14 LINE L1 -2 6159 4856 559 238 28 18 chr10 20798645 20798890 -124790398 + L1MEc LINE L1 1548 1936 -5082 494 308 47 49 chr10 20798873 20799282 -124790006 + L1MEc LINE L1 2339 2746 -4392 * 185 214 24 0 chr10 20800186 20800228 -124789060 - MIR SINE MIR -3 259 217 596 240 26 52 chr10 20800430 20800622 -124788666 - LTR67 LTR ERVL -7 550 364 312 355 0 0 chr10 20800721 20800831 -124788457 - LTR67 LTR ERVL -346 211 102 216 387 13 13 chr10 20800989 20801139 -124788149 - L2 LINE L2 -414 2900 2751 228 205 0 0 chr10 20801259 20801298 -124787990 + AluJ/monomer SINE Alu 1 39 -263 529 266 29 7 chr10 20801382 20801521 -124787767 - MIR SINE MIR -112 150 9 21 0 0 0 chr10 20801807 20801828 -124787460 + AT_rich Low_complexity Low_complexity 1 21 0 1634 163 0 8 chr10 20801828 20802085 -124787203 - AluJo SINE Alu -21 291 37 229 26 53 0 chr10 20803784 20803822 -124785466 + (TTG)n Simple_repeat Simple_repeat 2 41 0 192 234 0 0 chr10 20804095 20804142 -124785146 + (TATATG)n Simple_repeat Simple_repeat 2 48 0 243 43 0 0 chr10 20804146 20804192 -124785096 + LTR66 LTR ERVL 394 439 -171 683 273 67 25 chr10 20804508 20804746 -124784542 + MIR SINE MIR 15 262 0 888 162 35 0 chr10 20806179 20806377 -124782911 - L1MA2 LINE L1 0 6304 6100 2339 108 0 0 chr10 20806488 20806794 -124782494 + AluSp SINE Alu 1 306 -7 235 314 9 57 chr10 20806894 20806999 -124782289 + MIR SINE MIR 107 206 -56 239 54 27 0 chr10 20807110 20807147 -124782141 + (CA)n Simple_repeat Simple_repeat 2 39 0 320 301 35 64 chr10 20807183 20807356 -124781932 + MIR3 SINE MIR 34 201 -7 480 286 56 6 chr10 20807862 20808023 -124781265 - MIR SINE MIR 0 262 94 26 0 0 0 chr10 20808129 20808155 -124781133 + AT_rich Low_complexity Low_complexity 1 26 0 23 78 0 0 chr10 20808325 20808376 -124780912 + AT_rich Low_complexity Low_complexity 1 51 0 7032 39 1 0 chr10 20809570 20810419 -124778869 + L1PA4 LINE L1 5305 6154 -1 189 378 51 11 chr10 20811198 20811315 -124777973 - MIR SINE MIR -76 132 5 3603 141 0 3 chr10 20811647 20812220 -124777068 - L1PB4 LINE L1 0 6156 5586 669 260 37 98 chr10 20812402 20812810 -124776478 - L1MDa LINE L1 -6123 417 35 180 0 0 0 chr10 20812829 20812849 -124776439 + (TAAAA)n Simple_repeat Simple_repeat 5 24 0 34 0 0 0 chr10 20813314 20813348 -124775940 + AT_rich Low_complexity Low_complexity 1 34 0 1140 203 101 85 chr10 20813634 20813871 -124775417 - MER34B LTR ERV1 0 565 333 207 0 0 0 chr10 20813871 20813894 -124775394 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1140 203 101 85 chr10 20813894 20814208 -124775080 - MER34B LTR ERV1 -232 333 5 1497 359 54 34 chr10 20814382 20815345 -124773943 + L2 LINE L2 206 1187 -2127 358 334 140 50 chr10 20815359 20815796 -124773492 + HAL1 LINE L1 14 489 -2018 776 163 7 22 chr10 20815797 20815932 -124773356 + FLAM_C SINE Alu 1 133 0 2055 173 8 19 chr10 20815991 20816030 -124773258 - MLT1A1 LTR MaLR 0 365 327 2141 156 68 24 chr10 20816030 20816217 -124773071 + MSTA LTR MaLR 1 178 -250 180 0 0 0 chr10 20816217 20816237 -124773051 + (TC)n Simple_repeat Simple_repeat 2 21 0 2141 156 68 24 chr10 20816237 20816459 -124772829 + MSTA LTR MaLR 178 428 0 2055 173 8 19 chr10 20816459 20816788 -124772500 - MLT1A1 LTR MaLR -38 327 1 755 248 129 118 chr10 20817023 20818417 -124770871 + HAL1 LINE L1 758 2166 -341 363 23 0 0 chr10 20818689 20818733 -124770555 + (CA)n Simple_repeat Simple_repeat 1 44 0 189 397 0 32 chr10 20818740 20818866 -124770422 + L2 LINE L2 1233 1354 -1960 319 302 23 16 chr10 20819152 20819281 -124770007 + L2 LINE L2 1698 1827 -1487 319 245 163 0 chr10 20819364 20819462 -124769826 + L2 LINE L2 3185 3298 -15 1729 53 0 49 chr10 20819502 20819727 -124769561 - AluY SINE Alu -13 298 85 1902 157 0 26 chr10 20819958 20820270 -124769018 + AluSx SINE Alu 1 304 -8 207 200 0 22 chr10 20820546 20820591 -124768697 + T-rich Low_complexity Low_complexity 4 47 0 21 0 0 0 chr10 20820897 20820918 -124768370 + AT_rich Low_complexity Low_complexity 1 21 0 2196 112 6 10 chr10 20821034 20821346 -124767942 - AluSx SINE Alu -1 311 1 2324 78 0 16 chr10 20821723 20822030 -124767258 + AluY SINE Alu 1 302 -9 249 264 38 0 chr10 20822445 20822551 -124766737 + (TA)n Simple_repeat Simple_repeat 2 111 0 319 368 52 52 chr10 20822581 20822831 -124766457 - L2 LINE L2 -170 3143 2894 182 327 0 0 chr10 20822892 20822947 -124766341 + L2 LINE L2 3245 3299 -14 267 206 88 0 chr10 20824003 20824071 -124765217 + MIR SINE MIR 109 182 -80 969 192 29 0 chr10 20824071 20824243 -124765045 + MER5A DNA MER1_type 1 177 -12 204 338 86 56 chr10 20824560 20824794 -124764494 - L2 LINE L2 -221 3051 2811 22603 147 14 12 chr10 20825299 20830479 -124758809 - L1PA10 LINE L1 -11 6157 961 741 158 178 0 chr10 20830481 20830627 -124758661 - AluSc SINE Alu -12 297 126 842 149 0 8 chr10 20831634 20831768 -124757520 + AluSq/x SINE Alu 1 133 -179 277 296 132 13 chr10 20832050 20832202 -124757086 - MIR SINE MIR -73 189 20 2799 67 0 21 chr10 20832385 20832761 -124756527 - L1PA8 LINE L1 -2 6170 5803 389 284 92 7 chr10 20832851 20832992 -124756296 + MIR SINE MIR 107 259 -3 1978 157 13 0 chr10 20833096 20833395 -124755893 + AluSx SINE Alu 1 303 -9 21 0 0 0 chr10 20833723 20833744 -124755544 + AT_rich Low_complexity Low_complexity 1 21 0 292 313 0 25 chr10 20833954 20834034 -124755254 + L2 LINE L2 3186 3263 -9 295 308 20 56 chr10 20834121 20834319 -124754969 - MLT1K LTR MaLR -24 564 374 3868 169 13 4 chr10 20834650 20835348 -124753940 - MER50 LTR ERV1 -30 704 1 354 205 0 0 chr10 20836337 20836415 -124752873 + MADE1 DNA Mariner 3 80 0 2059 118 0 20 chr10 20836512 20836537 -124752751 - AluSx SINE Alu 0 308 284 657 0 0 0 chr10 20836537 20836610 -124752678 + (TTATG)n Simple_repeat Simple_repeat 2 74 0 2059 118 0 20 chr10 20836610 20836898 -124752390 - AluSx SINE Alu -24 284 1 1555 193 33 0 chr10 20836914 20837188 -124752100 - AluJo SINE Alu -29 283 1 219 114 0 0 chr10 20837860 20837895 -124751393 + (TG)n Simple_repeat Simple_repeat 2 36 0 24 0 0 0 chr10 20839350 20839374 -124749914 + AT_rich Low_complexity Low_complexity 1 24 0 306 167 22 11 chr10 20839378 20839468 -124749820 + (TAGA)n Simple_repeat Simple_repeat 1 91 0 344 129 0 57 chr10 20841321 20841413 -124747875 + (TA)n Simple_repeat Simple_repeat 2 87 -31 12792 38 7 0 chr10 20841413 20843744 -124745544 + L1PA5 LINE L1 3805 6146 -8 344 129 0 57 chr10 20843744 20843775 -124745513 + (TA)n Simple_repeat Simple_repeat 87 118 0 2370 124 19 35 chr10 20843883 20844028 -124745260 - THE1B LTR MaLR 0 364 218 2255 115 0 19 chr10 20844028 20844341 -124744947 - AluSg SINE Alu -2 308 2 2370 124 19 35 chr10 20844341 20844565 -124744723 - THE1B LTR MaLR -146 218 1 1826 154 17 30 chr10 20845145 20845443 -124743845 + AluSx SINE Alu 3 296 -16 180 125 0 0 chr10 20845648 20845680 -124743608 + (GA)n Simple_repeat Simple_repeat 2 33 0 1903 195 56 0 chr10 20845680 20846074 -124743214 - MLT2C2 LTR ERVL -48 416 1 202 266 25 13 chr10 20846241 20846320 -124742968 + CT-rich Low_complexity Low_complexity 2 81 0 2866 53 6 3 chr10 20847362 20847747 -124741541 + L1PA8 LINE L1 5794 6179 0 257 242 61 0 chr10 20847794 20847860 -124741428 + GA-rich Low_complexity Low_complexity 1 70 0 2174 169 60 7 chr10 20848073 20848476 -124740812 - MSTA LTR MaLR 0 428 5 360 0 0 0 chr10 20848540 20848580 -124740708 + (CA)n Simple_repeat Simple_repeat 2 41 0 1706 158 40 4 chr10 20849395 20849667 -124739621 + AluJb SINE Alu 1 282 -30 284 226 58 51 chr10 20849867 20850004 -124739284 + Charlie2 DNA MER1_type 67 204 -2658 333 606 0 11 chr10 20850176 20850356 -124738932 + polypyrimidine Low_complexity Low_complexity 3 180 0 249 141 50 50 chr10 20850340 20850461 -124738827 + CT-rich Low_complexity Low_complexity 2 122 0 * 247 335 39 0 chr10 20850515 20850697 -124738591 + Charlie2a DNA MER1_type 1474 1662 -1200 369 277 9 0 chr10 20850720 20850832 -124738456 + Charlie2a DNA MER1_type 2749 2861 -1 2128 148 0 0 chr10 20852197 20852507 -124736781 + AluSx SINE Alu 1 310 -2 1306 218 76 17 chr10 20852812 20853156 -124736132 - MLT1A2 LTR MaLR -6 368 5 711 192 0 0 chr10 20853449 20853574 -124735714 + AluJb SINE Alu 1 125 -187 354 134 0 0 chr10 20854227 20854294 -124734994 + (TCC)n Simple_repeat Simple_repeat 3 69 0 1686 110 3 116 chr10 20854886 20855228 -124734060 - AluSq SINE Alu 0 315 9 328 252 62 86 chr10 20855270 20855480 -124733808 + LTR33 LTR ERVL 12 216 -305 757 155 4 23 chr10 20855555 20855821 -124733467 + CT-rich Low_complexity Low_complexity 1 261 0 429 268 71 11 chr10 20855822 20856005 -124733283 + LTR33 LTR ERVL 327 520 -1 1554 154 30 77 chr10 20856251 20856549 -124732739 + AluSx SINE Alu 1 284 -28 42 0 0 0 chr10 20856572 20856614 -124732674 + AT_rich Low_complexity Low_complexity 1 42 0 1513 225 0 25 chr10 20856910 20857230 -124732058 - AluJo SINE Alu 0 312 1 2319 104 0 3 chr10 20857237 20857546 -124731742 - AluSx SINE Alu -3 309 2 1601 146 30 86 chr10 20857708 20858009 -124731279 + AluSx SINE Alu 1 284 -28 191 159 23 23 chr10 20858129 20858173 -124731115 + MIR3 SINE MIR 156 199 -9 282 200 88 0 chr10 20858590 20858670 -124730618 + FRAM SINE Alu 55 141 -25 281 176 0 0 chr10 20859090 20859141 -124730147 + CT-rich Low_complexity Low_complexity 3 53 0 429 268 71 11 chr10 20859142 20859325 -124729963 + LTR33 LTR ERVL 327 520 -1 1625 148 30 74 chr10 20859571 20859868 -124729420 + AluSx SINE Alu 1 284 -28 191 159 23 23 chr10 20859988 20860032 -124729256 + MIR3 SINE MIR 156 199 -9 615 155 10 10 chr10 20860443 20860546 -124728742 + FRAM SINE Alu 46 148 -28 358 298 85 0 chr10 20861787 20861881 -124727407 - L2 LINE L2 -9 3304 3203 3017 121 76 0 chr10 20862150 20862612 -124726676 - LOR1a LTR ERV1 0 497 1 308 189 15 106 chr10 20863352 20863484 -124725804 - MER5C DNA MER1_type 0 324 205 730 92 0 25 chr10 20863489 20863609 -124725679 + LTR9B LTR ERV1 445 561 -83 712 227 74 0 chr10 20863612 20863815 -124725473 - MER5C DNA MER1_type -106 218 1 4009 149 37 36 chr10 20864316 20865100 -124724188 - LTR1 LTR ERV1 0 785 1 298 265 0 0 chr10 20865409 20865492 -124723796 - L1ME4a LINE L1 -93 6028 5946 697 194 15 15 chr10 20865617 20865818 -124723470 - Charlie1a DNA MER1_type -6 1449 1249 25 51 0 0 chr10 20865818 20865857 -124723431 + AT_rich Low_complexity Low_complexity 1 39 0 2188 144 24 92 chr10 20866051 20866508 -124722780 - MSTB LTR MaLR 0 426 1 328 238 59 0 chr10 20866548 20866649 -124722639 - Charlie1a DNA MER1_type -311 1144 1038 2302 125 59 7 chr10 20866649 20867056 -124722232 + MSTA LTR MaLR 1 428 0 * 2849 215 50 80 chr10 20867056 20868124 -124721164 - Charlie1a DNA MER1_type -417 1038 3 327 85 0 0 chr10 20868128 20868175 -124721113 - MSTB LTR MaLR 0 426 380 1740 169 0 0 chr10 20868175 20868429 -124720859 + AluSx SINE Alu 1 254 -58 255 31 0 0 chr10 20868441 20868473 -124720815 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 1102 99 6 11 chr10 20868476 20868657 -124720631 + (GAA)n Simple_repeat Simple_repeat 1 180 0 204 40 0 0 chr10 20868659 20868684 -124720604 + (CAG)n Simple_repeat Simple_repeat 2 26 0 2072 179 13 5 chr10 20868694 20869080 -124720208 - MSTB LTR MaLR -37 389 1 362 320 88 0 chr10 20869084 20869278 -124720010 - L1ME4a LINE L1 -270 5851 5641 1154 204 82 22 chr10 20869322 20869591 -124719697 + AluJo SINE Alu 1 285 -17 777 76 0 0 chr10 20869592 20869697 -124719591 + (TA)n Simple_repeat Simple_repeat 2 106 0 314 200 33 33 chr10 20870254 20870344 -124718944 - L1MC4 LINE L1 -1340 6702 6613 354 339 15 15 chr10 20873149 20873279 -124716009 - L2 LINE L2 -2 3270 3141 229 307 23 34 chr10 20873277 20873365 -124715923 + MIR3 SINE MIR 116 202 -6 * 1947 168 0 0 chr10 20873378 20873682 -124715606 + AluJo SINE Alu 2 305 -7 1784 170 0 26 chr10 20874514 20874825 -124714463 + AluJo SINE Alu 1 303 -9 1185 144 0 0 chr10 20874967 20875141 -124714147 + FRAM SINE Alu 1 167 -9 4436 197 35 19 chr10 20875802 20876222 -124713066 + L1MB4 LINE L1 4152 4564 -1616 2398 117 11 16 chr10 20876222 20876597 -124712691 + THE1C LTR MaLR 3 375 0 4436 197 35 19 chr10 20876597 20878165 -124711123 + L1MB4 LINE L1 4564 6162 -18 25 0 0 0 chr10 20878171 20878196 -124711092 + AT_rich Low_complexity Low_complexity 1 25 0 472 136 0 0 chr10 20878203 20878284 -124711004 + L1MB8 LINE L1 6097 6177 -1 249 303 0 13 chr10 20880569 20880645 -124708643 + (TG)n Simple_repeat Simple_repeat 2 76 0 198 0 0 0 chr10 20880656 20880678 -124708610 + (TG)n Simple_repeat Simple_repeat 2 23 0 2778 16 0 3 chr10 20880786 20881098 -124708190 - AluY SINE Alu 0 311 1 243 125 0 0 chr10 20881872 20881912 -124707376 + (CA)n Simple_repeat Simple_repeat 1 40 0 1148 154 127 0 chr10 20882427 20882554 -124706734 - L1MA9 LINE L1 -14 6298 6189 252 0 0 0 chr10 20882554 20882582 -124706706 + (TG)n Simple_repeat Simple_repeat 1 28 0 1148 154 127 0 chr10 20882582 20882713 -124706575 - L1MA9 LINE L1 -123 6189 6007 2304 104 0 0 chr10 20883327 20883624 -124705664 - AluSq SINE Alu -16 297 1 962 234 34 75 chr10 20884293 20884762 -124704526 - L1MC5 LINE L1 -90 7871 7422 37 0 0 0 chr10 20884763 20884800 -124704488 + AT_rich Low_complexity Low_complexity 1 37 0 306 299 112 52 chr10 20885838 20886400 -124702888 - MLT1L LTR MaLR -6 609 14 455 269 29 0 chr10 20887467 20887571 -124701717 + U6 snRNA snRNA 1 107 0 23 0 0 0 chr10 20887730 20887753 -124701535 + AT_rich Low_complexity Low_complexity 1 23 0 1833 169 3 3 chr10 20887791 20888098 -124701190 - AluJb SINE Alu -5 307 1 477 256 55 6 chr10 20888112 20888276 -124701012 + L1ME LINE L1 5643 5814 -307 1815 179 117 28 chr10 20888297 20888329 -124700959 - MLT1D LTR MaLR -7 498 470 1459 209 3 10 chr10 20888329 20888450 -124700838 + AluJo SINE Alu 1 121 -191 393 22 0 0 chr10 20888450 20888496 -124700792 + (TAA)n Simple_repeat Simple_repeat 3 48 0 1459 209 3 10 chr10 20888496 20888675 -124700613 + AluJo SINE Alu 121 299 -13 1815 179 117 28 chr10 20888675 20889071 -124700217 - MLT1D LTR MaLR -35 470 32 266 325 25 25 chr10 20890373 20890493 -124698795 + MIR SINE MIR 72 191 -71 393 321 129 5 chr10 20892147 20892340 -124696948 - MIR SINE MIR -1 261 45 811 321 71 42 chr10 20892683 20893299 -124695989 - Tigger8 DNA MER2_type -9 657 24 303 191 22 11 chr10 20893702 20893791 -124695497 + GA-rich Low_complexity Low_complexity 2 91 0 5656 171 20 31 chr10 20894226 20896224 -124693064 - L1PA13 LINE L1 -4 6159 4168 214 203 0 17 chr10 20896644 20896703 -124692585 + T-rich Low_complexity Low_complexity 3 60 0 1157 141 4 98 chr10 20897074 20897308 -124691980 + AluJb SINE Alu 85 296 -16 1894 123 18 21 chr10 20897310 20897623 -124691665 + AluSx SINE Alu 1 312 0 2161 100 0 4 chr10 20898366 20898672 -124690616 + AluSx SINE Alu 2 306 0 525 242 83 0 chr10 20898719 20898839 -124690449 + FLAM_A SINE Alu 1 130 -3 301 306 0 97 chr10 20898986 20899172 -124690116 + MER5A DNA MER1_type 3 170 -19 180 0 0 0 chr10 20899309 20899329 -124689959 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 2115 97 4 4 chr10 20899329 20899607 -124689681 - AluSq SINE Alu -33 280 3 1532 156 0 33 chr10 20899913 20900157 -124689131 + AluJb SINE Alu 1 236 -76 185 83 28 0 chr10 20900182 20900218 -124689070 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 236 196 0 0 chr10 20900222 20900273 -124689015 + LTR66 LTR ERVL 389 439 -171 856 213 6 0 chr10 20900281 20900445 -124688843 + FRAM SINE Alu 1 165 -11 2500 178 83 99 chr10 20900575 20901312 -124687976 + LTR8A LTR ERV1 1 725 -2 1953 146 0 27 chr10 20901399 20901694 -124687594 + AluJb SINE Alu 1 287 -25 1689 172 61 22 chr10 20902365 20902726 -124686562 - THE1C LTR MaLR 0 375 1 2260 156 9 36 chr10 20904735 20905092 -124684196 + L1MB3 LINE L1 5742 6086 -97 1965 155 0 0 chr10 20905092 20905383 -124683905 - AluSx SINE Alu -21 291 1 2260 156 9 36 chr10 20905383 20905475 -124683813 + L1MB3 LINE L1 6086 6179 -4 1425 153 118 38 chr10 20905903 20906190 -124683098 - AluJb SINE Alu -2 310 1 25 31 0 0 chr10 20906558 20906590 -124682698 + AT_rich Low_complexity Low_complexity 1 32 0 8587 248 45 49 chr10 20906635 20909062 -124680226 + L1MB7 LINE L1 2 2439 -4233 1792 159 10 13 chr10 20909062 20909370 -124679918 + AluSx SINE Alu 1 307 -5 8587 248 45 49 chr10 20909370 20911716 -124677572 + L1MB7 LINE L1 2439 4844 -1828 1480 218 70 24 chr10 20911716 20912087 -124677201 + MLT1B LTR MaLR 1 388 -2 8587 248 45 49 chr10 20912087 20913354 -124675934 + L1MB7 LINE L1 4844 6116 -556 2388 172 39 20 chr10 20913359 20913853 -124675435 + L1MB7 LINE L1 6164 6666 -16 2558 138 14 21 chr10 20916466 20916902 -124672386 - Tigger2a DNA MER2_type -1 433 1 516 278 117 24 chr10 20917433 20917638 -124671650 - MIR SINE MIR -27 235 12 186 189 0 0 chr10 20918521 20918558 -124670730 + T-rich Low_complexity Low_complexity 1 37 0 228 235 0 44 chr10 20920273 20920341 -124668947 + A-rich Low_complexity Low_complexity 1 65 0 414 0 0 0 chr10 20920384 20920430 -124668858 + (TG)n Simple_repeat Simple_repeat 2 47 0 335 23 23 0 chr10 20921188 20921232 -124668056 + (CA)n Simple_repeat Simple_repeat 2 46 0 212 294 119 24 chr10 20921716 20921842 -124667446 - L2 LINE L2 -791 2523 2386 296 296 39 58 chr10 20921848 20922054 -124667234 + MLT1J LTR MaLR 1 202 -309 753 268 29 35 chr10 20922085 20922557 -124666731 + L1ME3A LINE L1 5591 6093 -71 648 267 95 30 chr10 20923825 20923957 -124665331 + MIR SINE MIR 15 137 -125 6091 168 36 17 chr10 20923957 20925164 -124664124 - Tigger3b DNA MER2_type -1 1230 1 648 267 95 30 chr10 20925164 20925263 -124664025 + MIR SINE MIR 137 261 -1 1015 123 0 13 chr10 20925714 20925868 -124663420 - AluSg/x SINE Alu -1 309 158 466 225 0 0 chr10 20925868 20925957 -124663331 - MLT1A2 LTR MaLR -281 93 5 192 77 0 0 chr10 20925961 20925987 -124663301 + (TG)n Simple_repeat Simple_repeat 1 26 0 22 103 0 0 chr10 20927057 20927135 -124662153 + AT_rich Low_complexity Low_complexity 1 78 0 24 67 0 0 chr10 20927224 20927269 -124662019 + AT_rich Low_complexity Low_complexity 1 45 0 340 169 0 46 chr10 20927279 20927344 -124661944 - L2 LINE L2 -10 3262 3201 2212 157 53 22 chr10 20927863 20928051 -124661237 + MSTB LTR MaLR 1 182 -244 2278 84 0 0 chr10 20928051 20928360 -124660928 + AluSp SINE Alu 1 309 0 2212 157 53 22 chr10 20928360 20928583 -124660705 + MSTB LTR MaLR 182 426 0 1940 166 10 0 chr10 20929272 20929580 -124659708 + AluSx SINE Alu 1 311 -1 251 289 24 24 chr10 20930040 20930123 -124659165 - MIR SINE MIR -104 158 76 1912 202 6 3 chr10 20930268 20930630 -124658658 + MLT1A1 LTR MaLR 1 363 -2 183 398 43 0 chr10 20931220 20931313 -124657975 + L2 LINE L2 3150 3246 -26 2805 16 0 9 chr10 20931596 20931913 -124657375 - AluYb8 SINE Alu -4 314 1 892 196 108 5 chr10 20933487 20933701 -124655587 + MER46A DNA MER2_type 1 236 0 1275 181 4 4 chr10 20933776 20934030 -124655258 + L1MA6 LINE L1 6047 6300 0 2082 133 13 7 chr10 20934171 20934611 -124654677 + AluSx SINE Alu 1 442 0 574 114 23 8 chr10 20934479 20934792 -124654496 + GA-rich Low_complexity Low_complexity 1 315 0 361 339 101 31 chr10 20934849 20935206 -124654082 + L2 LINE L2 2268 2649 -665 215 381 79 7 chr10 20935467 20935606 -124653682 + L2 LINE L2 3122 3270 -2 1592 145 40 48 chr10 20935724 20936076 -124653212 - LTR23 LTR ERV1 0 437 89 1644 167 52 46 chr10 20936091 20936252 -124653036 + LTR35 LTR ERV1 251 410 -208 2748 191 5 45 chr10 20936252 20936791 -124652497 - MER41D LTR ERV1 0 557 41 1932 116 0 31 chr10 20936791 20937084 -124652204 + AluSc SINE Alu 9 292 -17 2748 191 5 45 chr10 20937084 20937124 -124652164 - MER41D LTR ERV1 -516 41 1 1644 167 52 46 chr10 20937124 20937168 -124652120 + LTR35 LTR ERV1 410 452 -166 2188 96 23 0 chr10 20937168 20937469 -124651819 - AluSg SINE Alu -2 308 1 1644 167 52 46 chr10 20937469 20937628 -124651660 + LTR35 LTR ERV1 452 618 0 1099 308 70 35 chr10 20937654 20938282 -124651006 + L1ME3A LINE L1 11 728 -6131 1887 112 32 18 chr10 20938282 20938560 -124650728 - AluSx SINE Alu -28 284 3 1099 308 70 35 chr10 20938560 20938643 -124650645 + L1ME3A LINE L1 728 807 -6052 2184 112 0 3 chr10 20938650 20938953 -124650335 + AluSx SINE Alu 1 302 -10 1351 194 48 35 chr10 20939030 20939319 -124649969 + AluJo SINE Alu 14 306 -6 1719 240 63 63 chr10 20939322 20940570 -124648718 + L1ME3A LINE L1 858 2099 -4833 1397 229 16 10 chr10 20940569 20940957 -124648331 + L1ME3A LINE L1 3540 3929 -3028 * 454 280 153 50 chr10 20941062 20941803 -124647485 + L1ME3A LINE L1 4967 5837 -1120 2100 167 17 0 chr10 20941803 20942163 -124647125 + MER47A DNA MER2_type 1 366 0 454 280 153 50 chr10 20942163 20942408 -124646880 + L1ME3A LINE L1 5837 6055 -902 1408 190 38 19 chr10 20942414 20942677 -124646611 - AluJb SINE Alu -44 268 1 396 192 39 128 chr10 20942724 20942927 -124646361 + L1ME3A LINE L1 6129 6313 -660 866 184 37 32 chr10 20942927 20943117 -124646171 + MLT1A2 LTR MaLR 1 191 -183 321 188 0 0 chr10 20943117 20943197 -124646091 + CT-rich Low_complexity Low_complexity 1 80 0 759 231 22 11 chr10 20943227 20943409 -124645879 + MLT1A2 LTR MaLR 191 374 0 251 246 264 0 chr10 20943450 20943560 -124645728 + L1ME3A LINE L1 6311 6449 -532 261 0 0 0 chr10 20943595 20943624 -124645664 + (TA)n Simple_repeat Simple_repeat 2 30 0 367 249 108 58 chr10 20943653 20943894 -124645394 + L1ME3A LINE L1 6467 6719 -262 3231 201 31 57 chr10 20946111 20946941 -124642347 - L1MB7 LINE L1 -51 6631 5842 4401 182 14 13 chr10 20946941 20947733 -124641555 - MER54B LTR ERVL 0 793 1 3231 201 31 57 chr10 20947733 20948040 -124641248 - L1MB7 LINE L1 -840 5842 5529 1151 218 40 30 chr10 20948039 20948443 -124640845 - L1MB7 LINE L1 -4896 1646 1239 * 22 35 0 0 chr10 20948794 20948823 -124640465 + AT_rich Low_complexity Low_complexity 1 29 0 2267 113 0 0 chr10 20949792 20950093 -124639195 + AluSx SINE Alu 1 301 -11 1310 208 27 67 chr10 20950591 20950799 -124638489 - MLT1A2 LTR MaLR -11 363 175 2136 126 7 0 chr10 20950799 20951101 -124638187 - AluSx SINE Alu -6 306 3 1310 208 27 67 chr10 20951101 20951267 -124638021 - MLT1A2 LTR MaLR -199 175 4 27 29 0 0 chr10 20951538 20951572 -124637716 + AT_rich Low_complexity Low_complexity 1 34 0 1560 211 10 7 chr10 20951574 20951873 -124637415 - AluJb SINE Alu -10 302 3 1911 179 47 28 chr10 20951905 20952454 -124636834 + MLT2A1 LTR ERVL 1 554 0 201 254 0 0 chr10 20953215 20953274 -124636014 + (TA)n Simple_repeat Simple_repeat 2 60 0 278 26 26 0 chr10 20953276 20953315 -124635973 + (GA)n Simple_repeat Simple_repeat 1 40 0 538 175 24 63 chr10 20955234 20955395 -124633893 - FLAM_A SINE Alu 0 133 1 1291 278 55 80 chr10 20955613 20956917 -124632371 - L1MEc LINE L1 -4310 2812 1541 279 79 0 0 chr10 20956922 20956960 -124632328 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 790 201 0 20 chr10 20956964 20957113 -124632175 - FRAM SINE Alu -30 146 1 935 288 53 12 chr10 20957114 20957454 -124631834 - L1MEc LINE L1 -5091 1332 979 1740 184 33 50 chr10 20957822 20958219 -124631069 + MLT1B LTR MaLR 1 390 0 4584 66 12 0 chr10 20958512 20959408 -124629880 + L1P3 LINE L1 4756 5657 -497 234 255 0 0 chr10 20959825 20959876 -124629412 - MIR SINE MIR -28 234 184 822 148 30 108 chr10 20959898 20959965 -124629323 - MER3 DNA MER1_type -13 196 125 5584 115 19 7 chr10 20959965 20960984 -124628304 - L1PA13 LINE L1 -5 6158 5131 822 148 30 108 chr10 20960984 20961119 -124628169 - MER3 DNA MER1_type -84 125 10 2466 81 0 3 chr10 20961171 20961481 -124627807 + AluY SINE Alu 1 309 -2 2017 122 0 20 chr10 20961918 20962222 -124627066 + AluSx SINE Alu 1 298 -14 183 269 167 28 chr10 20962633 20962741 -124626547 + L2 LINE L2 3190 3312 -1 817 195 39 5 chr10 20963090 20963271 -124626017 - L1MA9 LINE L1 -364 5948 5775 263 128 49 61 chr10 20963277 20963441 -124625847 + (TA)n Simple_repeat Simple_repeat 2 163 0 2510 167 4 17 chr10 20963482 20963954 -124625334 - L1MA9 LINE L1 -543 5769 5304 2181 64 0 4 chr10 20964045 20964311 -124624977 - AluY SINE Alu -19 292 28 201 147 0 0 chr10 20964348 20964382 -124624906 + (CATATA)n Simple_repeat Simple_repeat 2 35 0 1969 102 39 14 chr10 20964522 20964807 -124624481 + AluSc SINE Alu 1 292 -17 1686 154 34 27 chr10 20964837 20964955 -124624333 + AluJo SINE Alu 10 126 -186 216 0 0 0 chr10 20964955 20964979 -124624309 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1686 154 34 27 chr10 20964979 20965152 -124624136 + AluJo SINE Alu 126 303 -9 206 214 0 0 chr10 20965239 20965281 -124624007 + GA-rich Low_complexity Low_complexity 1 42 0 187 273 78 78 chr10 20965576 20965704 -124623584 - L3b LINE CR1 -336 1247 1120 475 202 87 60 chr10 20968359 20968577 -124620711 - L1M4 LINE L1 -1357 4789 4566 2353 107 7 0 chr10 20968672 20968982 -124620306 - AluSx SINE Alu 0 312 1 396 336 46 23 chr10 20969922 20970139 -124619149 + L2 LINE L2 2545 2766 -548 225 0 0 0 chr10 20970277 20970302 -124618986 + (T)n Simple_repeat Simple_repeat 1 25 0 1250 130 4 15 chr10 20970634 20970873 -124618415 + AluY SINE Alu 1 301 -10 311 274 75 9 chr10 20971622 20971728 -124617560 + MLT1K LTR MaLR 1 113 -475 374 218 0 163 chr10 20972063 20972210 -124617078 + L2 LINE L2 3182 3304 -9 3132 129 35 0 chr10 20972550 20973062 -124616226 - L1PA13 LINE L1 0 6163 5634 240 128 0 0 chr10 20973048 20973087 -124616201 + L1PA13 LINE L1 5617 5655 -506 191 208 21 42 chr10 20973336 20973384 -124615904 + L2 LINE L2 3261 3307 -6 380 255 52 46 chr10 20973969 20974122 -124615166 + MIR SINE MIR 12 165 -97 303 71 0 0 chr10 20975436 20975478 -124613810 + (GA)n Simple_repeat Simple_repeat 2 43 0 338 333 94 66 chr10 20975862 20976180 -124613108 - L2 LINE L2 0 3272 2946 241 171 0 0 chr10 20976310 20976351 -124612937 - Alu SINE Alu -259 43 3 1835 165 0 16 chr10 20977014 20977317 -124611971 + AluJo SINE Alu 3 300 -12 233 296 0 0 chr10 20978011 20978065 -124611223 + L2 LINE L2 3252 3305 -8 225 0 0 0 chr10 20978508 20978533 -124610755 + (GA)n Simple_repeat Simple_repeat 1 25 0 * 393 22 0 0 chr10 20978532 20978578 -124610710 + (TG)n Simple_repeat Simple_repeat 2 47 0 1319 154 158 12 chr10 20979109 20979384 -124609904 - AluJo SINE Alu 0 312 2 2068 142 0 0 chr10 20980026 20980328 -124608960 + AluSq SINE Alu 1 302 -11 1459 99 54 18 chr10 20980377 20980598 -124608690 - MER30 DNA MER1_type -1 229 1 356 317 69 7 chr10 20980614 20980759 -124608529 + MIR SINE MIR 25 178 -84 252 281 118 37 chr10 20981456 20981591 -124607697 - MIR3 SINE MIR -5 203 58 21 36 0 0 chr10 20981615 20981643 -124607645 + AT_rich Low_complexity Low_complexity 1 28 0 310 313 62 39 chr10 20982525 20982704 -124606584 - L1ME4a LINE L1 -1 6120 5938 624 258 66 1 chr10 20982713 20982905 -124606383 + MIR SINE MIR 61 262 0 989 207 0 11 chr10 20983116 20983304 -124605984 + AluJb SINE Alu 1 186 -126 21 0 0 0 chr10 20984113 20984134 -124605154 + AT_rich Low_complexity Low_complexity 1 21 0 2736 154 29 10 chr10 20984683 20985201 -124604087 + L1MA4A LINE L1 5774 6301 -2 189 0 0 0 chr10 20985693 20985714 -124603574 + (TTTTTA)n Simple_repeat Simple_repeat 2 22 0 1653 155 54 30 chr10 20985719 20986016 -124603272 - AluJo SINE Alu -8 304 1 188 302 0 0 chr10 20986244 20986297 -124602991 + MIR SINE MIR 94 146 -62 2108 202 29 27 chr10 20986639 20987124 -124602164 - MER66B LTR ERV1 0 486 1 2016 122 48 14 chr10 20987914 20988266 -124601022 - THE1B LTR MaLR 0 364 1 547 256 119 0 chr10 20988589 20988757 -124600531 + MER5A DNA MER1_type 1 188 -1 398 341 83 18 chr10 20988821 20989050 -124600238 - MIR SINE MIR -4 258 15 616 128 0 0 chr10 20989160 20989246 -124600042 + AluJ/FLAM SINE Alu 1 86 -226 21 36 0 0 chr10 20989253 20989281 -124600007 + AT_rich Low_complexity Low_complexity 1 28 0 2082 147 33 14 chr10 20990522 20990890 -124598398 + THE1C LTR MaLR 1 375 0 2070 144 0 7 chr10 20992663 20992969 -124596319 - AluSx SINE Alu -7 305 2 322 195 184 0 chr10 20993138 20993225 -124596063 + MER5A DNA MER1_type 10 112 -77 1883 132 3 66 chr10 20993245 20993578 -124595710 + AluJb SINE Alu 1 312 0 738 189 0 0 chr10 20994512 20994678 -124594610 - FLAM_C SINE Alu 0 166 1 908 185 49 0 chr10 20995498 20995682 -124593606 + MER20 DNA MER1_type 1 193 -26 21 0 0 0 chr10 20996065 20996086 -124593202 + AT_rich Low_complexity Low_complexity 1 21 0 350 231 135 19 chr10 20996161 20996265 -124593023 + L2 LINE L2 3190 3305 -8 180 0 0 0 chr10 20996349 20996369 -124592919 + (TTG)n Simple_repeat Simple_repeat 2 21 0 333 330 9 9 chr10 20996501 20996607 -124592681 + MIR SINE MIR 36 141 -67 1342 171 4 0 chr10 20996616 20996850 -124592438 - MER46A DNA MER2_type 0 236 2 2220 112 0 31 chr10 20996926 20997247 -124592041 + AluY SINE Alu 1 311 0 486 46 0 0 chr10 20997478 20997543 -124591745 + (CA)n Simple_repeat Simple_repeat 2 66 0 424 297 126 16 chr10 20998127 20998309 -124590979 - MIR SINE MIR 0 262 61 321 339 55 0 chr10 20999418 20999545 -124589743 + L2 LINE L2 3138 3271 -1 1909 181 79 10 chr10 20999942 21000142 -124589146 - MSTB1 LTR MaLR 0 432 247 315 49 0 0 chr10 21000142 21000183 -124589105 + (GA)n Simple_repeat Simple_repeat 1 41 0 1909 181 79 10 chr10 21000183 21000367 -124588921 - MSTB1 LTR MaLR -185 247 16 240 43 43 21 chr10 21000367 21000414 -124588874 + (CAAA)n Simple_repeat Simple_repeat 2 49 0 1909 181 79 10 chr10 21000414 21000432 -124588856 - MSTB1 LTR MaLR -416 16 1 181 319 0 0 chr10 21000759 21000806 -124588482 - L3b LINE CR1 -9 1574 1528 2033 140 7 0 chr10 21000859 21001152 -124588136 - AluSx SINE Alu -17 295 1 307 211 28 162 chr10 21001702 21001844 -124587444 + L2 LINE L2 3143 3265 -7 2259 103 0 31 chr10 21002135 21002456 -124586832 - AluSx SINE Alu 0 312 2 23 33 0 0 chr10 21003245 21003275 -124586013 + AT_rich Low_complexity Low_complexity 1 30 0 256 288 41 0 chr10 21003504 21003577 -124585711 - L2 LINE L2 -1 3312 3237 1347 191 61 22 chr10 21005148 21005426 -124583862 - AluJo SINE Alu -23 289 1 23 33 0 0 chr10 21005638 21005668 -124583620 + AT_rich Low_complexity Low_complexity 1 30 0 181 324 73 29 chr10 21005788 21005856 -124583432 - L2 LINE L2 -18 3295 3225 1255 192 71 47 chr10 21007320 21007684 -124581604 - MLT1D LTR MaLR -42 463 91 3272 193 13 44 chr10 21007707 21008187 -124581101 - LTR39 LTR ERV1 0 783 336 2058 140 10 0 chr10 21008187 21008487 -124580801 - AluSq SINE Alu -10 303 1 3272 193 13 44 chr10 21008487 21008795 -124580493 - LTR39 LTR ERV1 -447 336 20 234 234 47 0 chr10 21008784 21008848 -124580440 - MLT1D LTR MaLR -192 313 247 * 23 0 0 0 chr10 21009196 21009219 -124580069 + AT_rich Low_complexity Low_complexity 1 23 0 1328 145 4 4 chr10 21009239 21009466 -124579822 - L1PA15 LINE L1 -7 6158 5932 1680 153 0 81 chr10 21010243 21010576 -124578712 + AluJb SINE Alu 7 312 0 230 160 20 0 chr10 21010577 21010627 -124578661 + GA-rich Low_complexity Low_complexity 3 53 0 235 289 67 19 chr10 21010639 21010743 -124578545 + MIR SINE MIR 106 214 -48 33 85 0 0 chr10 21010743 21010825 -124578463 + AT_rich Low_complexity Low_complexity 1 82 0 21 36 0 0 chr10 21010894 21010922 -124578366 + AT_rich Low_complexity Low_complexity 1 28 0 215 211 0 19 chr10 21011533 21011549 -124577739 + (CTA)n Simple_repeat Simple_repeat 1 16 -35 2301 114 0 0 chr10 21011549 21011848 -124577440 - AluSx SINE Alu -13 299 1 215 211 0 19 chr10 21011848 21011883 -124577405 + (CTA)n Simple_repeat Simple_repeat 16 51 0 469 297 110 38 chr10 21011955 21012164 -124577124 - MIR SINE MIR -13 249 26 2008 84 18 25 chr10 21012745 21013031 -124576257 + AluSq SINE Alu 26 309 -4 429 303 21 28 chr10 21013037 21013179 -124576109 + L2 LINE L2 3172 3312 -1 857 189 0 51 chr10 21014531 21014706 -124574582 - FRAM SINE Alu 0 166 1 198 340 134 43 chr10 21015804 21016013 -124573275 - L2 LINE L2 -219 3053 2826 198 402 0 0 chr10 21016077 21016164 -124573124 + L3 LINE CR1 1469 1555 -22 1386 99 0 11 chr10 21017566 21017747 -124571541 + AluSg/x SINE Alu 127 305 -7 189 0 0 0 chr10 21017747 21017768 -124571520 + (GA)n Simple_repeat Simple_repeat 2 22 0 244 189 27 0 chr10 21018315 21018389 -124570899 + GA-rich Low_complexity Low_complexity 1 76 0 518 301 142 28 chr10 21018494 21018889 -124570399 + MLT1J LTR MaLR 23 462 -49 776 203 7 20 chr10 21019328 21019476 -124569812 - FRAM SINE Alu -19 157 12 199 255 0 0 chr10 21020430 21020477 -124568811 + L2 LINE L2 3216 3262 -10 188 300 0 0 chr10 21020603 21020643 -124568645 - MIR SINE MIR -18 244 205 1643 173 14 38 chr10 21021381 21021728 -124567560 - MER44D DNA MER2_type 0 609 1 2159 137 0 0 chr10 21022238 21022538 -124566750 - AluSx SINE Alu -12 300 1 183 323 32 43 chr10 21023564 21023657 -124565631 - MIR SINE MIR -142 120 29 395 328 101 21 chr10 21023716 21023954 -124565334 + L3 LINE CR1 764 1020 -557 180 77 0 0 chr10 21023999 21024025 -124565263 + (TTTTTG)n Simple_repeat Simple_repeat 2 27 0 2562 50 0 19 chr10 21024067 21024384 -124564904 - AluY SINE Alu 0 311 1 376 209 45 68 chr10 21024987 21025007 -124564281 - Charlie1b DNA MER1_type -2259 502 483 1849 135 26 32 chr10 21025007 21025319 -124563969 - AluJb SINE Alu -2 310 1 376 209 45 68 chr10 21025319 21025475 -124563813 - Charlie1b DNA MER1_type -2278 483 330 10312 28 2 0 chr10 21025479 21027473 -124561815 - L1PA3 LINE L1 0 6155 4155 3438 30 2 0 chr10 21027473 21027901 -124561387 + L1PA3 LINE L1 3715 4143 -2003 1055 237 73 19 chr10 21027901 21028218 -124561070 - Charlie1b DNA MER1_type -188 335 2 2281 119 0 3 chr10 21028361 21028671 -124560617 + AluSx SINE Alu 1 309 -3 29 0 0 0 chr10 21030325 21030354 -124558934 + AT_rich Low_complexity Low_complexity 1 29 0 422 266 111 29 chr10 21030947 21031154 -124558134 - MIR SINE MIR -19 243 20 25 0 0 0 chr10 21031338 21031363 -124557925 + AT_rich Low_complexity Low_complexity 1 25 0 1593 150 0 7 chr10 21031363 21031636 -124557652 - L1PA16 LINE L1 -3 6163 5893 1046 76 0 0 chr10 21031665 21031797 -124557491 - AluY SINE Alu -179 132 1 261 0 0 0 chr10 21031799 21031828 -124557460 + (T)n Simple_repeat Simple_repeat 1 29 0 23 0 0 0 chr10 21031879 21031902 -124557386 + AT_rich Low_complexity Low_complexity 1 23 0 760 244 77 27 chr10 21033313 21033534 -124555754 - MIR SINE MIR -28 234 3 200 57 0 29 chr10 21035351 21035386 -124553902 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 24 53 0 0 chr10 21035645 21035683 -124553605 + AT_rich Low_complexity Low_complexity 1 38 0 235 98 0 0 chr10 21035765 21035806 -124553482 - L1PA7 LINE L1 -3 6151 6111 * 3631 62 10 0 chr10 21035799 21036285 -124553003 + L1PA7 LINE L1 5389 5879 -275 832 212 24 91 chr10 21036467 21036807 -124552481 - MER33 DNA MER1_type -7 317 1 954 154 6 30 chr10 21036896 21037065 -124552223 + FRAM SINE Alu 1 165 -11 202 276 121 20 chr10 21037451 21037644 -124551644 + MIR SINE MIR 8 260 -2 649 317 55 39 chr10 21037877 21038189 -124551099 + L2 LINE L2 2961 3277 -36 2382 85 3 19 chr10 21038350 21038667 -124550621 - AluSp SINE Alu -1 312 1 300 314 12 0 chr10 21038826 21038912 -124550376 - MIR SINE MIR -67 141 55 24 32 0 0 chr10 21038979 21039010 -124550278 + AT_rich Low_complexity Low_complexity 1 31 0 26 64 0 0 chr10 21039168 21039215 -124550073 + AT_rich Low_complexity Low_complexity 1 47 0 613 146 0 0 chr10 21039312 21039415 -124549873 - L1PA16 LINE L1 0 6166 6064 11858 175 12 7 chr10 21041730 21042097 -124547191 - L1PB1 LINE L1 0 6867 6503 329 0 0 24 chr10 21042097 21042139 -124547149 + (TG)n Simple_repeat Simple_repeat 2 42 0 198 103 0 0 chr10 21042143 21042172 -124547116 + (TA)n Simple_repeat Simple_repeat 2 30 0 11858 175 12 7 chr10 21042172 21043534 -124545754 - L1PB1 LINE L1 -366 6501 5148 216 0 0 0 chr10 21043534 21043558 -124545730 + (TTTTA)n Simple_repeat Simple_repeat 4 27 0 11858 175 12 7 chr10 21043558 21045462 -124543826 - L1PB1 LINE L1 -1719 5148 3208 1007 123 17 102 chr10 21045472 21045708 -124543580 - L1PB1 LINE L1 -6014 849 634 1113 152 10 0 chr10 21045708 21045906 -124543382 - L1PB1 LINE L1 -6663 200 1 677 240 45 54 chr10 21047037 21047279 -124542009 - L2 LINE L2 -1 3312 3073 218 189 0 19 chr10 21047292 21047327 -124541961 + (TG)n Simple_repeat Simple_repeat 2 37 -16 2405 215 35 13 chr10 21047327 21047872 -124541416 - MER74A LTR ERVL 0 558 2 218 189 0 19 chr10 21047872 21047889 -124541399 + (TG)n Simple_repeat Simple_repeat 37 53 0 207 298 0 18 chr10 21047892 21047949 -124541339 - L2 LINE L2 -239 3074 3019 245 271 24 0 chr10 21048823 21048908 -124540380 - Charlie2 DNA MER1_type 0 2862 2776 239 284 112 9 chr10 21048975 21049091 -124540197 + L2 LINE L2 2481 2608 -706 418 266 26 53 chr10 21049261 21049603 -124539685 - Charlie2 DNA MER1_type -300 2562 2230 287 238 36 0 chr10 21049649 21049733 -124539555 - Charlie2 DNA MER1_type -2471 311 225 231 143 0 0 chr10 21050929 21050964 -124538324 - MIR SINE MIR -21 241 207 243 0 0 0 chr10 21051291 21051318 -124537970 + (TA)n Simple_repeat Simple_repeat 1 27 0 454 257 33 20 chr10 21051430 21051582 -124537706 - MIR SINE MIR 0 262 109 207 0 0 0 chr10 21051714 21051737 -124537551 + (T)n Simple_repeat Simple_repeat 1 23 0 2046 142 3 3 chr10 21051851 21052161 -124537127 + AluSg SINE Alu 1 310 0 436 275 104 28 chr10 21052689 21052871 -124536417 - MIR3 SINE MIR -3 205 10 1059 169 135 82 chr10 21054244 21054599 -124534689 + THE1C LTR MaLR 1 374 -1 198 156 0 0 chr10 21055038 21055083 -124534205 + (CA)n Simple_repeat Simple_repeat 2 46 0 608 188 0 14 chr10 21055147 21055291 -124533997 + GA-rich Low_complexity Low_complexity 3 144 0 258 314 32 51 chr10 21055743 21055899 -124533389 - MIR SINE MIR -47 215 63 1870 225 63 33 chr10 21055932 21056765 -124532523 - L1MDa LINE L1 -3700 2840 1984 468 306 11 6 chr10 21056778 21056958 -124532330 - L1MDa LINE L1 -6359 181 1 231 114 0 0 chr10 21056979 21057014 -124532274 + (GAA)n Simple_repeat Simple_repeat 2 36 0 1939 121 9 65 chr10 21057249 21057571 -124531717 - AluSx SINE Alu -8 304 1 217 286 231 39 chr10 21057661 21057843 -124531445 - MIR SINE MIR 0 262 46 217 305 99 33 chr10 21060951 21061102 -124528186 + L3 LINE CR1 1203 1363 -214 1341 137 85 102 chr10 21061357 21061759 -124527529 + LTR1 LTR ERV1 12 406 -379 411 202 0 12 chr10 21061759 21061843 -124527445 - 7SLRNA srpRNA srpRNA -236 84 2 704 211 0 0 chr10 21061847 21061980 -124527308 - FLAM_C SINE Alu 0 133 1 185 65 32 0 chr10 21062032 21062063 -124527225 + (TTTTA)n Simple_repeat Simple_repeat 2 33 0 1180 198 40 36 chr10 21062068 21062320 -124526968 - AluJo SINE Alu -30 282 30 307 264 33 74 chr10 21062836 21062957 -124526331 + MER91A DNA MER1_type 18 133 -63 2138 118 7 10 chr10 21062975 21063281 -124526007 - AluSx SINE Alu -7 305 1 184 29 29 29 chr10 21064410 21064444 -124524844 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 1467 174 34 4 chr10 21064913 21065178 -124524110 + AluJo SINE Alu 10 282 -30 185 333 0 0 chr10 21065874 21065931 -124523357 + MIR SINE MIR 91 147 -115 203 182 23 0 chr10 21068198 21068242 -124521046 + (TTCA)n Simple_repeat Simple_repeat 1 45 0 2315 80 3 16 chr10 21068542 21068855 -124520433 + AluSc SINE Alu 1 309 0 2047 112 13 0 chr10 21069013 21069325 -124519963 - L1PB3 LINE L1 -184 5970 5655 2253 129 0 0 chr10 21069780 21070083 -124519205 - AluSx SINE Alu -7 305 3 849 125 7 29 chr10 21070123 21070259 -124519029 + AluSq/x SINE Alu 1 133 -179 231 229 14 14 chr10 21071681 21071715 -124517573 + GA-rich Low_complexity Low_complexity 3 36 -36 1967 141 3 7 chr10 21071715 21072021 -124517267 + AluSx SINE Alu 6 310 -2 231 229 14 14 chr10 21072021 21072056 -124517232 + GA-rich Low_complexity Low_complexity 35 72 0 252 0 0 0 chr10 21072983 21073011 -124516277 + (TG)n Simple_repeat Simple_repeat 2 29 0 202 358 11 0 chr10 21074120 21074215 -124515073 + MIR SINE MIR 46 141 -121 258 170 0 0 chr10 21074380 21074394 -124514894 + (CA)n Simple_repeat Simple_repeat 2 15 -39 2121 120 0 0 chr10 21074394 21074693 -124514595 + AluSg1 SINE Alu 11 309 0 258 170 0 0 chr10 21074693 21074731 -124514557 + (CA)n Simple_repeat Simple_repeat 14 54 0 716 158 23 12 chr10 21074801 21074972 -124514316 + GA-rich Low_complexity Low_complexity 1 173 0 552 229 86 70 chr10 21077109 21077353 -124511935 - L1ME3A LINE L1 0 6170 5923 1108 229 5 0 chr10 21077353 21077576 -124511712 - MER58A DNA MER1_type 0 224 1 675 227 7 32 chr10 21077618 21077772 -124511516 - MER63A DNA MER1_type -3 207 58 218 226 38 0 chr10 21077826 21077879 -124511409 + MIR SINE MIR 94 148 -114 357 24 0 0 chr10 21078572 21078614 -124510674 + (TA)n Simple_repeat Simple_repeat 2 43 0 1954 174 100 3 chr10 21079333 21079723 -124509565 - MSTA LTR MaLR 0 428 1 22 0 0 0 chr10 21081316 21081338 -124507950 + AT_rich Low_complexity Low_complexity 1 22 0 352 303 139 56 chr10 21083091 21083358 -124505930 + L3b LINE CR1 1202 1490 -93 2001 140 3 16 chr10 21083511 21083826 -124505462 + AluSx SINE Alu 1 311 -1 2065 154 35 35 chr10 21085500 21085699 -124503589 - MER57A LTR ERV1 0 403 205 2268 86 0 3 chr10 21085699 21086013 -124503275 + AluSq SINE Alu 1 313 0 2065 154 35 35 chr10 21086013 21086216 -124503072 - MER57A LTR ERV1 -197 206 1 519 182 6 116 chr10 21087439 21087608 -124501680 + MLT1D LTR MaLR 18 166 -339 1906 147 23 14 chr10 21087608 21088043 -124501245 - MER1A DNA MER1_type 0 533 1 1094 211 92 57 chr10 21088043 21088370 -124500918 + MLT1D LTR MaLR 160 498 -7 335 322 50 8 chr10 21088382 21088503 -124500785 + MIR SINE MIR 8 133 -129 284 155 0 17 chr10 21088695 21088753 -124500535 + CT-rich Low_complexity Low_complexity 2 58 0 216 97 0 0 chr10 21089405 21089436 -124499852 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 220 336 40 27 chr10 21089647 21089796 -124499492 + MIR SINE MIR 28 178 -84 2024 111 62 0 chr10 21089893 21090181 -124499107 + AluSc SINE Alu 1 306 -3 5722 177 30 25 chr10 21091012 21093187 -124496101 + L1PA16 LINE L1 3956 6157 -9 21 36 0 0 chr10 21093187 21093215 -124496073 + AT_rich Low_complexity Low_complexity 1 28 0 200 206 0 0 chr10 21093240 21093274 -124496014 + polypyrimidine Low_complexity Low_complexity 3 36 0 22 0 0 0 chr10 21093915 21093937 -124495351 + AT_rich Low_complexity Low_complexity 1 22 0 1475 99 0 5 chr10 21093958 21094150 -124495138 - AluSx SINE Alu -75 237 47 203 314 172 6 chr10 21094254 21094423 -124494865 - L2 LINE L2 -627 2687 2491 24 32 0 0 chr10 21095624 21095655 -124493633 + AT_rich Low_complexity Low_complexity 1 31 0 379 88 0 0 chr10 21096110 21096167 -124493121 - AluJo SINE Alu 0 302 246 984 186 5 42 chr10 21096170 21096363 -124492925 - AluJo SINE Alu -126 186 1 290 305 55 23 chr10 21096579 21096707 -124492581 + MIR SINE MIR 117 248 -14 2154 114 10 0 chr10 21096828 21097118 -124492170 + AluSq SINE Alu 1 293 -20 648 197 87 6 chr10 21097337 21097520 -124491768 + Charlie5 DNA MER1_type 2388 2585 -27 243 325 0 48 chr10 21097690 21097773 -124491515 + L2 LINE L2 3192 3270 -43 476 274 97 37 chr10 21098527 21098848 -124490440 - L1MC4a LINE L1 -308 5813 5542 216 0 0 0 chr10 21099846 21099870 -124489418 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 203 321 36 0 chr10 21100142 21100198 -124489090 - MIR SINE MIR -64 144 87 1324 216 7 28 chr10 21101106 21101393 -124487895 + AluJo SINE Alu 1 281 -31 189 0 0 0 chr10 21101418 21101439 -124487849 + (TAAAA)n Simple_repeat Simple_repeat 4 24 0 230 281 0 0 chr10 21101548 21101605 -124487683 + CT-rich Low_complexity Low_complexity 3 59 0 186 43 0 0 chr10 21103363 21103386 -124485902 + (T)n Simple_repeat Simple_repeat 1 23 0 1980 112 7 3 chr10 21103415 21103719 -124485569 - AluY SINE Alu -6 305 1 2186 73 0 20 chr10 21103741 21104041 -124485247 + AluY SINE Alu 9 302 -9 811 21 0 0 chr10 21104412 21104506 -124484782 - L1PA4 LINE L1 -379 5776 5683 3051 43 3 0 chr10 21104506 21104877 -124484411 + L1PA4 LINE L1 5779 6153 -2 626 239 38 38 chr10 21105097 21105281 -124484007 + MER63A DNA MER1_type 1 184 -26 351 241 15 83 chr10 21105697 21105830 -124483458 + L2 LINE L2 3122 3245 -27 609 300 14 14 chr10 21105832 21106042 -124483246 + LTR16A LTR ERVL 211 420 -30 383 243 0 23 chr10 21107161 21107334 -124481954 + (TA)n Simple_repeat Simple_repeat 1 169 0 358 229 33 0 chr10 21107348 21107501 -124481787 + (TA)n Simple_repeat Simple_repeat 1 158 0 790 296 102 42 chr10 21108961 21109345 -124479943 + L3 LINE CR1 1143 1553 -24 1936 131 3 3 chr10 21109345 21109642 -124479646 - AluSx SINE Alu -15 297 1 790 296 102 42 chr10 21109642 21109659 -124479629 + L3 LINE CR1 1553 1568 -9 183 218 36 55 chr10 21112726 21112781 -124476507 - L2 LINE L2 0 3272 3219 2143 204 17 0 chr10 21113227 21113639 -124475649 + L1PA15 LINE L1 5746 6164 -1 435 174 0 0 chr10 21114252 21114338 -124474950 + (TA)n Simple_repeat Simple_repeat 1 86 0 241 119 0 0 chr10 21114343 21114385 -124474903 - LTR66 LTR ERVL -175 435 394 198 143 0 0 chr10 21114385 21114420 -124474868 + (TA)n Simple_repeat Simple_repeat 2 36 0 303 293 181 17 chr10 21115697 21115813 -124473475 + L2 LINE L2 3138 3272 0 503 226 51 69 chr10 21116066 21116202 -124473086 - HAL1 LINE L1 -109 2398 2265 2292 60 0 14 chr10 21116202 21116524 -124472764 + AluY SINE Alu 1 318 0 503 226 51 69 chr10 21116524 21116603 -124472685 - HAL1 LINE L1 -242 2265 2186 1918 259 78 57 chr10 21116666 21116795 -124472493 - HAL1 LINE L1 -707 1800 1675 1859 124 4 0 chr10 21116795 21117052 -124472236 + AluSx SINE Alu 45 302 -10 1918 259 78 57 chr10 21117052 21117233 -124472055 - HAL1 LINE L1 -832 1675 1499 2259 107 0 3 chr10 21117233 21117543 -124471745 - AluSg SINE Alu -1 309 1 1918 259 78 57 chr10 21117543 21118213 -124471075 - HAL1 LINE L1 -1008 1499 798 378 250 34 0 chr10 21118285 21118373 -124470915 + MER5A DNA MER1_type 9 99 -90 409 256 15 38 chr10 21118410 21118543 -124470745 - HAL1 LINE L1 -1839 668 539 1677 215 8 32 chr10 21118590 21118962 -124470326 - MLT1A2 LTR MaLR -11 363 1 315 167 106 15 chr10 21118970 21119036 -124470252 - HAL1 LINE L1 -2029 478 407 300 354 27 0 chr10 21119141 21119288 -124470000 - HAL1 LINE L1 -2355 152 2 186 274 118 0 chr10 21120286 21120337 -124468951 + L2 LINE L2 3242 3298 -15 1741 161 25 0 chr10 21120412 21120697 -124468591 - AluSx SINE Alu -15 297 6 854 198 16 21 chr10 21121406 21121593 -124467695 - MLT1A2 LTR MaLR 0 374 189 437 306 0 61 chr10 21121739 21121919 -124467369 - MLT1A2 LTR MaLR -205 169 1 249 53 79 0 chr10 21122372 21122410 -124466878 - MIR SINE MIR -67 141 101 278 279 10 29 chr10 21124749 21124853 -124464435 + MER5A DNA MER1_type 4 105 -84 194 266 0 24 chr10 21125754 21125882 -124463406 + MER5A DNA MER1_type 1 183 -6 214 135 0 0 chr10 21126054 21126091 -124463197 - L2 LINE L2 -1 3312 3276 625 291 43 19 chr10 21126772 21127030 -124462258 + L2 LINE L2 2664 2927 -387 222 37 0 0 chr10 21127114 21127141 -124462147 + (TGAA)n Simple_repeat Simple_repeat 3 29 0 261 119 0 0 chr10 21127568 21127610 -124461678 + (A)n Simple_repeat Simple_repeat 1 42 0 2253 79 0 22 chr10 21128583 21128898 -124460390 - AluY SINE Alu -3 308 1 2198 114 3 13 chr10 21129814 21130130 -124459158 - AluSq SINE Alu 0 313 1 45 69 0 0 chr10 21130666 21130753 -124458535 + AT_rich Low_complexity Low_complexity 1 87 0 2126 128 0 0 chr10 21130782 21131078 -124458210 - AluSg SINE Alu -14 296 1 2322 92 3 0 chr10 21131995 21132290 -124456998 + AluSp SINE Alu 1 296 -17 237 313 43 39 chr10 21133975 21134107 -124455181 + MIR SINE MIR 7 153 -63 2042 120 3 3 chr10 21134443 21134750 -124454538 - AluSx SINE Alu 0 307 1 24 0 0 0 chr10 21134805 21134829 -124454459 + AT_rich Low_complexity Low_complexity 1 24 0 207 0 0 0 chr10 21135284 21135307 -124453981 + (T)n Simple_repeat Simple_repeat 1 23 0 1539 171 6 84 chr10 21135343 21135676 -124453612 - AluJo SINE Alu -3 309 3 2182 97 3 3 chr10 21135774 21136072 -124453216 - AluSx SINE Alu -14 298 1 2850 191 27 16 chr10 21136184 21136740 -124452548 - MER68 LTR ERV1 0 562 1 214 377 84 31 chr10 21136742 21136933 -124452355 - L2 LINE L2 -111 3161 2961 861 134 22 8 chr10 21137188 21137322 -124451966 + AluJo SINE Alu 1 136 -176 1814 168 0 19 chr10 21137328 21137637 -124451651 + AluJo SINE Alu 1 303 -9 2234 106 48 31 chr10 21137689 21138047 -124451241 - THE1B LTR MaLR 0 364 1 218 323 55 31 chr10 21140903 21141030 -124448258 - MIR SINE MIR -98 164 35 183 42 0 0 chr10 21141300 21141324 -124447964 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 185 276 92 11 chr10 21141360 21141447 -124447841 + MIR3 SINE MIR 104 197 -11 2056 135 3 0 chr10 21143290 21143586 -124445702 - AluSq SINE Alu -14 299 3 372 281 18 26 chr10 21143890 21144004 -124445284 + MER81 DNA DNA 1 113 -1 1354 249 27 31 chr10 21144240 21144458 -124444830 - MER89 LTR ERV1 0 559 342 2118 114 4 0 chr10 21144458 21144760 -124444528 - AluSx SINE Alu 0 304 2 1354 249 27 31 chr10 21144760 21145002 -124444286 - MER89 LTR ERV1 -217 342 1 2460 144 41 5 chr10 21146486 21146897 -124442391 - MSTB LTR MaLR 0 426 1 1737 154 38 0 chr10 21146937 21147229 -124442059 + AluSx SINE Alu 1 303 -9 384 300 138 6 chr10 21148663 21148823 -124440465 - MER5A DNA MER1_type 0 189 9 2109 123 7 3 chr10 21149302 21149603 -124439685 + AluSx SINE Alu 1 302 -10 2169 147 40 8 chr10 21149696 21150049 -124439239 + THE1B LTR MaLR 1 364 0 1814 144 6 31 chr10 21153335 21153655 -124435633 - AluSx SINE Alu 0 312 1 270 116 0 0 chr10 21154198 21154241 -124435047 + (CCTA)n Simple_repeat Simple_repeat 4 46 0 24 32 0 0 chr10 21154328 21154359 -124434929 + AT_rich Low_complexity Low_complexity 1 31 0 1050 90 17 11 chr10 21155196 21155298 -124433990 + (TTCC)n Simple_repeat Simple_repeat 1 281 0 1050 90 17 11 chr10 21155298 21155476 -124433812 + (TTCC)n Simple_repeat Simple_repeat 1 179 0 258 206 0 0 chr10 21156367 21156435 -124432853 + (TG)n Simple_repeat Simple_repeat 1 68 0 198 150 0 0 chr10 21158104 21158144 -124431144 + (GA)n Simple_repeat Simple_repeat 1 40 0 277 269 59 24 chr10 21158928 21159078 -124430210 - Charlie8 DNA MER1_type -2132 285 136 731 154 0 31 chr10 21160026 21160156 -124429132 + FLAM_C SINE Alu 1 126 -7 1563 203 38 38 chr10 21160481 21160851 -124428437 + MLT1B LTR MaLR 1 370 -20 1272 172 60 34 chr10 21161044 21161312 -124427976 - AluJo SINE Alu -1 311 37 222 174 0 0 chr10 21161585 21161631 -124427657 + (TA)n Simple_repeat Simple_repeat 2 47 0 204 111 67 0 chr10 21162211 21162256 -124427032 + T-rich Low_complexity Low_complexity 2 49 0 1139 99 82 11 chr10 21162285 21162467 -124426821 - L1PA8 LINE L1 -2 6170 5976 2309 72 3 7 chr10 21162697 21163025 -124426263 - AluSg SINE Alu 0 310 1 306 275 166 46 chr10 21163242 21163526 -124425762 - L2 LINE L2 0 3313 2996 238 136 62 0 chr10 21164106 21164187 -124425101 + (TA)n Simple_repeat Simple_repeat 2 87 0 1834 156 117 14 chr10 21164391 21164750 -124424538 + MSTD LTR MaLR 1 396 0 198 71 0 0 chr10 21165589 21165617 -124423671 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 4832 136 40 36 chr10 21165627 21166297 -124422991 - L1PA16 LINE L1 -9 6157 5480 2143 113 14 0 chr10 21166297 21166590 -124422698 - AluSp SINE Alu -16 297 1 4832 136 40 36 chr10 21166590 21166819 -124422469 - L1PA16 LINE L1 -686 5480 5254 38 22 0 0 chr10 21166897 21166942 -124422346 + AT_rich Low_complexity Low_complexity 1 45 0 220 292 0 15 chr10 21167210 21167275 -124422013 + L2 LINE L2 3180 3243 -70 385 271 221 0 chr10 21167569 21167691 -124421597 + MER5B DNA MER1_type 28 176 -2 433 161 74 19 chr10 21167825 21167987 -124421301 + (TATAA)n Simple_repeat Simple_repeat 4 174 0 443 181 78 0 chr10 21168000 21168166 -124421122 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 1407 196 110 46 chr10 21168226 21168598 -124420690 + MSTD LTR MaLR 1 396 0 604 220 187 0 chr10 21169192 21169342 -124419946 - MER5B DNA MER1_type 0 178 1 30 0 0 0 chr10 21170606 21170636 -124418652 + AT_rich Low_complexity Low_complexity 1 30 0 520 268 49 41 chr10 21171283 21171479 -124417809 + MLT1H LTR MaLR 11 251 -298 1885 145 7 10 chr10 21171479 21171782 -124417506 - MER101 LTR ERV1 0 474 173 1550 176 112 0 chr10 21172284 21172596 -124416692 + MER7A DNA MER2_type 2 346 0 2082 134 3 0 chr10 21173007 21173306 -124415982 + AluSx SINE Alu 1 300 -12 1497 193 40 50 chr10 21173723 21174101 -124415187 + MLT1A2 LTR MaLR 1 374 0 1096 86 0 0 chr10 21174953 21175105 -124414183 - L1PA5 LINE L1 -1 6153 6002 2015 97 31 17 chr10 21175572 21175861 -124413427 + AluSg SINE Alu 18 310 0 232 241 165 13 chr10 21177324 21177403 -124411885 - HAL1b LINE L1 -15 1333 1243 2199 233 53 56 chr10 21177539 21178199 -124411089 + MER72 LTR ERV1 1 658 -64 399 56 19 0 chr10 21178324 21178378 -124410910 + MER72 LTR ERV1 668 722 0 330 306 20 20 chr10 21178554 21178701 -124410587 - HAL1b LINE L1 -538 810 664 1120 237 30 79 chr10 21179250 21179643 -124409645 - MLT1A2 LTR MaLR 0 374 1 207 0 0 0 chr10 21180182 21180205 -124409083 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 42 36 0 0 chr10 21181380 21181436 -124407852 + AT_rich Low_complexity Low_complexity 1 56 0 324 70 0 0 chr10 21181687 21181730 -124407558 + (TTCC)n Simple_repeat Simple_repeat 4 46 0 1210 77 0 16 chr10 21181740 21181922 -124407366 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 1904 131 4 0 chr10 21181927 21182202 -124407086 - AluSx SINE Alu -36 276 1 386 315 76 20 chr10 21182219 21182416 -124406872 - MLT1K LTR MaLR -190 398 191 1842 135 4 0 chr10 21182797 21183057 -124406231 - AluSx SINE Alu -45 267 7 22 35 0 0 chr10 21185086 21185115 -124404173 + AT_rich Low_complexity Low_complexity 1 29 0 227 336 39 55 chr10 21185123 21185251 -124404037 + MIR SINE MIR 40 165 -97 492 298 36 18 chr10 21185293 21185461 -124403827 - MIR SINE MIR -48 214 44 765 226 62 16 chr10 21186282 21186525 -124402763 - L1MCc LINE L1 -6133 290 37 8046 162 12 34 chr10 21186727 21188988 -124400300 + L1PA14 LINE L1 3913 6154 -7 432 0 0 0 chr10 21188988 21189036 -124400252 + (TA)n Simple_repeat Simple_repeat 2 49 0 631 240 56 34 chr10 21189056 21189289 -124399999 - Charlie7 DNA MER1_type -1939 673 436 521 232 10 0 chr10 21189297 21189396 -124399892 - MER5A DNA MER1_type -80 109 10 928 187 42 0 chr10 21189404 21189570 -124399718 - MER58B DNA MER1_type 0 341 169 291 114 0 0 chr10 21190315 21190359 -124398929 + (A)n Simple_repeat Simple_repeat 1 44 0 192 239 88 80 chr10 21191394 21191507 -124397781 + MIR SINE MIR 108 221 -41 740 235 157 16 chr10 21191590 21191909 -124397379 - MER31A LTR ERV1 -18 467 104 457 231 12 0 chr10 21191989 21192126 -124397162 + (TGGA)n Simple_repeat Simple_repeat 4 145 -20 2853 24 0 0 chr10 21192126 21192457 -124396831 + L1PA4 LINE L1 5823 6153 -2 457 231 12 0 chr10 21192457 21192479 -124396809 + (TGGA)n Simple_repeat Simple_repeat 145 165 0 228 304 188 9 chr10 21193581 21193693 -124395595 + MIR SINE MIR 6 137 -125 21 0 0 0 chr10 21195584 21195605 -124393683 + AT_rich Low_complexity Low_complexity 1 21 0 946 112 20 0 chr10 21195732 21195884 -124393404 - L1MA4A LINE L1 -4 6299 6145 767 302 34 11 chr10 21195890 21196125 -124393163 + MIR SINE MIR 1 230 -32 326 230 296 0 chr10 21196588 21196723 -124392565 + MER5A DNA MER1_type 9 183 -6 1786 141 41 3 chr10 21197623 21197914 -124391374 - AluJo SINE Alu -10 302 1 198 0 0 0 chr10 21198081 21198103 -124391185 + (A)n Simple_repeat Simple_repeat 1 22 0 192 374 12 24 chr10 21198482 21198565 -124390723 + MIR SINE MIR 11 92 -170 2494 245 23 15 chr10 21198591 21199256 -124390032 - L1MC4a LINE L1 -1 7807 7138 322 269 162 107 chr10 21199613 21199736 -124389552 - MIR SINE MIR -12 250 108 2156 104 0 10 chr10 21199736 21200052 -124389236 + AluSc SINE Alu 1 309 0 322 269 162 107 chr10 21200052 21200144 -124389144 - MIR SINE MIR -154 108 23 24 67 0 0 chr10 21200461 21200506 -124388782 + AT_rich Low_complexity Low_complexity 1 45 0 2244 83 0 0 chr10 21201808 21202086 -124387202 - AluY SINE Alu -7 304 27 184 324 20 74 chr10 21202247 21202395 -124386893 + L2 LINE L2 2375 2514 -800 631 303 29 61 chr10 21202413 21202461 -124386827 + LTR16C LTR ERVL 224 272 -219 190 56 56 0 chr10 21202461 21202497 -124386791 + T-rich Low_complexity Low_complexity 3 40 0 631 303 29 61 chr10 21202497 21202725 -124386563 + LTR16C LTR ERVL 272 491 0 246 350 89 32 chr10 21202763 21203009 -124386279 - L2 LINE L2 -337 2977 2718 3402 134 31 8 chr10 21203024 21203538 -124385750 - MER1A DNA MER1_type 0 529 4 377 21 0 0 chr10 21204582 21204629 -124384659 + MADE1 DNA Mariner 1 47 -33 28 0 0 0 chr10 21204725 21204753 -124384535 + AT_rich Low_complexity Low_complexity 1 28 0 2217 96 3 7 chr10 21204996 21205297 -124383991 + AluSq SINE Alu 1 300 -13 301 136 30 0 chr10 21206196 21206262 -124383026 + (TA)n Simple_repeat Simple_repeat 1 68 0 22 0 0 0 chr10 21206377 21206399 -124382889 + AT_rich Low_complexity Low_complexity 1 22 0 1575 165 38 10 chr10 21206976 21207267 -124382021 + AluJo SINE Alu 4 302 -10 1092 172 6 0 chr10 21207273 21207453 -124381835 + FRAM SINE Alu 1 176 0 2548 93 34 8 chr10 21208936 21209291 -124379997 + THE1B LTR MaLR 1 364 0 1757 130 6 71 chr10 21209658 21209981 -124379307 + AluSp SINE Alu 2 303 -10 1115 39 22 28 chr10 21209984 21210165 -124379123 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1913 163 0 7 chr10 21212782 21213082 -124376206 - AluJo SINE Alu -14 298 1 569 298 87 14 chr10 21213903 21214121 -124375167 + MIR SINE MIR 16 249 -13 246 139 0 0 chr10 21215402 21215445 -124373843 - L1MB3 LINE L1 -3 6180 6138 235 143 18 18 chr10 21215495 21215551 -124373737 + CT-rich Low_complexity Low_complexity 2 57 0 1187 198 0 22 chr10 21215767 21215994 -124373294 + AluJo SINE Alu 79 300 -12 28 71 0 0 chr10 21216616 21216672 -124372616 + AT_rich Low_complexity Low_complexity 1 56 0 5970 66 88 0 chr10 21216726 21217557 -124371731 + L1PA8 LINE L1 5269 6172 0 316 234 81 32 chr10 21217561 21217685 -124371603 + L1ME LINE L1 5204 5333 -813 481 276 35 7 chr10 21217698 21217843 -124371445 + L1MCa LINE L1 140 288 -6276 1846 171 42 35 chr10 21217844 21218372 -124370916 - MLT2A2 LTR ERVL 0 554 18 1208 263 75 25 chr10 21218376 21218814 -124370474 + L1MCa LINE L1 106 565 -5480 563 205 141 46 chr10 21218975 21219238 -124370050 + L1MCa LINE L1 1289 1576 -4988 1234 164 19 157 chr10 21219287 21219352 -124369936 + L1MC3 LINE L1 7413 7485 -300 2113 110 3 28 chr10 21219352 21219669 -124369619 + AluSc SINE Alu 1 309 0 1234 164 19 157 chr10 21219669 21220036 -124369252 + L1MC3 LINE L1 7485 7785 0 371 295 24 43 chr10 21220028 21220235 -124369053 + L1ME LINE L1 5346 5548 -2260 * 312 164 25 118 chr10 21220345 21220473 -124368815 + L1ME LINE L1 5720 5844 -277 236 51 0 51 chr10 21220527 21220566 -124368722 + (TATG)n Simple_repeat Simple_repeat 4 40 0 2515 47 0 7 chr10 21220787 21221088 -124368200 + AluY SINE Alu 1 299 -12 1641 175 14 7 chr10 21223771 21223917 -124365371 - AluJo SINE Alu -30 282 132 254 29 29 0 chr10 21223917 21223952 -124365336 + (TTTTA)n Simple_repeat Simple_repeat 2 37 0 1641 175 14 7 chr10 21223952 21224085 -124365203 - AluJo SINE Alu -180 132 1 506 316 138 0 chr10 21226230 21226448 -124362840 + MIR SINE MIR 15 262 0 414 0 0 0 chr10 21226763 21226809 -124362479 + (TG)n Simple_repeat Simple_repeat 2 47 0 230 332 102 34 chr10 21226878 21227113 -124362175 - L2 LINE L2 -217 3055 2805 230 222 0 0 chr10 21230008 21230053 -124359235 + L2 LINE L2 3262 3306 -7 1519 255 75 27 chr10 21230199 21230681 -124358607 + MLT1D LTR MaLR 1 505 0 1538 205 7 3 chr10 21231283 21231566 -124357722 - AluSx SINE Alu -28 284 1 214 174 43 0 chr10 21231931 21231977 -124357311 - MIR SINE MIR -139 123 76 192 152 0 0 chr10 21232289 21232322 -124356966 + CT-rich Low_complexity Low_complexity 5 37 0 181 107 0 0 chr10 21232486 21232514 -124356774 - L2 LINE L2 -1 3271 3244 875 175 88 58 chr10 21232591 21232899 -124356389 - MER33 DNA MER1_type -7 317 1 279 358 30 0 chr10 21233301 21233435 -124355853 - L2 LINE L2 -563 2751 2614 526 188 78 13 chr10 21233479 21233633 -124355655 + MER103 DNA DNA 3 166 0 212 338 15 15 chr10 21233939 21234075 -124355213 + GA-rich Low_complexity Low_complexity 5 140 0 22 0 0 0 chr10 21235420 21235442 -124353846 + AT_rich Low_complexity Low_complexity 1 22 0 191 150 50 20 chr10 21235477 21235577 -124353711 + (TTATA)n Simple_repeat Simple_repeat 3 105 0 1497 212 85 21 chr10 21235684 21235936 -124353352 - MLT1D LTR MaLR -17 488 195 366 80 0 0 chr10 21235936 21235986 -124353302 + (TG)n Simple_repeat Simple_repeat 2 51 0 1497 212 85 21 chr10 21235986 21236167 -124353121 - MLT1D LTR MaLR -310 195 27 28 29 0 0 chr10 21236667 21236702 -124352586 + AT_rich Low_complexity Low_complexity 1 35 0 364 241 54 0 chr10 21236777 21236889 -124352399 - L1ME4a LINE L1 -32 6089 5972 22 0 0 0 chr10 21238475 21238497 -124350791 + AT_rich Low_complexity Low_complexity 1 22 0 2033 119 3 20 chr10 21239389 21239692 -124349596 - AluSx SINE Alu -12 300 3 1611 295 71 12 chr10 21240118 21240707 -124348581 - L2 LINE L2 -767 2547 1924 611 201 103 58 chr10 21240707 21240931 -124348357 - ORSL DNA AcHobo 0 275 42 383 263 55 89 chr10 21240947 21241183 -124348105 - L2 LINE L2 -1384 1930 1703 198 0 0 0 chr10 21241185 21241207 -124348081 + (GA)n Simple_repeat Simple_repeat 1 22 0 2348 90 6 3 chr10 21241225 21241536 -124347752 - AluSx SINE Alu 0 312 1 513 338 26 22 chr10 21241578 21241809 -124347479 - L2 LINE L2 -1823 1491 1260 21 0 0 0 chr10 21241870 21241891 -124347397 + AT_rich Low_complexity Low_complexity 1 21 0 2236 104 3 0 chr10 21242364 21242662 -124346626 + AluSc SINE Alu 1 299 -10 192 317 109 0 chr10 21243392 21243493 -124345795 + MIR SINE MIR 36 147 -115 254 351 8 30 chr10 21244196 21244330 -124344958 + L2 LINE L2 2889 3019 -253 351 59 0 88 chr10 21244602 21244704 -124344584 + (TA)n Simple_repeat Simple_repeat 1 93 0 207 371 62 10 chr10 21244841 21244938 -124344350 + L2 LINE L2 3121 3222 -50 24 0 0 0 chr10 21245512 21245536 -124343752 + AT_rich Low_complexity Low_complexity 1 24 0 278 250 131 0 chr10 21245877 21245961 -124343327 - MER103 DNA DNA -10 156 62 229 341 87 16 chr10 21248658 21248784 -124340504 - L2 LINE L2 -10 3262 3128 1329 205 15 111 chr10 21249449 21249854 -124339434 + MLT1A2 LTR MaLR 9 374 0 264 303 87 46 chr10 21251002 21251220 -124338068 + L2 LINE L2 2479 2705 -609 1971 157 7 0 chr10 21251434 21251740 -124337548 + AluSx SINE Alu 1 308 -4 191 378 20 26 chr10 21251742 21251893 -124337395 + L2 LINE L2 2707 2856 -458 234 343 0 0 chr10 21251910 21251983 -124337305 + L2 LINE L2 3228 3300 -13 234 312 112 114 chr10 21252007 21252437 -124336851 - L2 LINE L2 -40 3232 2804 29 60 0 0 chr10 21253302 21253352 -124335936 + AT_rich Low_complexity Low_complexity 1 50 0 428 271 112 38 chr10 21254551 21254971 -124334317 + L1M4 LINE L1 4154 4604 -1542 203 256 0 0 chr10 21254986 21255029 -124334259 + (TG)n Simple_repeat Simple_repeat 2 44 0 268 261 0 0 chr10 21255627 21255692 -124333596 + (TA)n Simple_repeat Simple_repeat 2 66 0 327 25 0 0 chr10 21255696 21255736 -124333552 + (CA)n Simple_repeat Simple_repeat 2 41 0 364 333 92 31 chr10 21256309 21256504 -124332784 - MIR SINE MIR -10 252 46 2476 82 125 5 chr10 21256788 21257188 -124332100 - LTR7 LTR ERV1 -2 448 1 2323 98 50 13 chr10 21257188 21257566 -124331722 - HERVH LTR ERV1 0 7713 7322 1386 109 23 14 chr10 21257564 21257785 -124331503 - HERVH LTR ERV1 -1894 5819 5597 * 4404 138 1 1 chr10 21257782 21258443 -124330845 - HERVH LTR ERV1 -2564 5149 4489 3298 114 12 6 chr10 21258446 21258945 -124330343 - HERVH LTR ERV1 -3720 3993 3492 902 142 20 0 chr10 21258935 21259083 -124330205 - HERVH LTR ERV1 -4423 3290 3140 * 20103 93 11 28 chr10 21259077 21262115 -124327173 - HERVH LTR ERV1 -4726 2987 1 2424 92 125 5 chr10 21262117 21262517 -124326771 - LTR7 LTR ERV1 -2 448 1 246 336 52 0 chr10 21263334 21263450 -124325838 - MIR SINE MIR -68 194 73 35 24 0 0 chr10 21263516 21263558 -124325730 + AT_rich Low_complexity Low_complexity 1 42 0 183 217 12 24 chr10 21263563 21263646 -124325642 + (CATA)n Simple_repeat Simple_repeat 2 83 0 504 146 68 3 chr10 21263692 21263990 -124325298 + (TA)n Simple_repeat Simple_repeat 1 317 0 663 161 61 8 chr10 21264048 21264446 -124324842 + (TA)n Simple_repeat Simple_repeat 1 419 0 695 197 0 0 chr10 21265186 21265308 -124323980 + FLAM_A SINE Alu 4 125 -8 11850 218 50 38 chr10 21265827 21268879 -124320409 - L1MA9 LINE L1 0 7333 4573 2320 111 0 0 chr10 21268879 21269177 -124320111 - AluSq SINE Alu -15 298 1 11850 218 50 38 chr10 21269177 21272362 -124316926 - L1MA9 LINE L1 -2760 4573 1428 1325 206 43 20 chr10 21272362 21272664 -124316624 - L1MA9 LINE L1 -6726 365 2 460 237 72 29 chr10 21274732 21274871 -124314417 - MIR SINE MIR -46 216 72 3079 172 20 25 chr10 21275154 21275758 -124313530 + MER6A DNA MER2_type 2 602 -3 198 326 54 62 chr10 21275978 21276107 -124313181 + MIR SINE MIR 75 202 -60 2167 136 0 0 chr10 21276109 21276410 -124312878 + AluSx SINE Alu 1 301 -11 4081 55 0 0 chr10 21276984 21277495 -124311793 + L1PA7 LINE L1 5644 6154 0 2350 68 3 0 chr10 21277497 21277791 -124311497 + AluY SINE Alu 1 328 -63 207 161 0 0 chr10 21277791 21277822 -124311466 + (CAAA)n Simple_repeat Simple_repeat 4 34 0 2350 68 3 0 chr10 21277822 21277887 -124311401 + AluY SINE Alu 328 391 0 450 0 0 0 chr10 21277888 21277938 -124311350 + (TCTA)n Simple_repeat Simple_repeat 1 50 0 183 184 0 0 chr10 21278387 21278425 -124310863 + (TAG)n Simple_repeat Simple_repeat 3 40 0 21 57 0 0 chr10 21278504 21278539 -124310749 + AT_rich Low_complexity Low_complexity 1 35 0 235 304 65 70 chr10 21280804 21281034 -124308254 + MIR SINE MIR 7 235 -27 906 129 0 80 chr10 21281114 21281315 -124307973 - AluSq SINE Alu -32 281 97 21 0 0 0 chr10 21281782 21281803 -124307485 + AT_rich Low_complexity Low_complexity 1 21 0 198 306 20 0 chr10 21282404 21282453 -124306835 - L3 LINE CR1 -106 1471 1422 552 292 0 0 chr10 21282565 21282695 -124306593 + MER94 DNA DNA 1 130 -4 182 289 105 13 chr10 21283264 21283340 -124305948 - L2 LINE L2 -49 3264 3182 444 324 14 0 chr10 21283534 21283676 -124305612 + MIR SINE MIR 109 252 -10 7741 57 10 2 chr10 21284530 21285562 -124303726 - L1P LINE L1 -3531 2615 1576 354 191 8 76 chr10 21286030 21286161 -124303127 - L1 LINE L1 -1174 4972 4851 3607 100 0 24 chr10 21286168 21286717 -124302571 + L1PB1 LINE L1 5615 6150 -1 644 66 33 0 chr10 21286990 21287081 -124302207 + THE1A LTR MaLR 3 96 -259 226 301 41 57 chr10 21287279 21287402 -124301886 - L1MC/D LINE L1 -2154 5654 5534 336 359 36 48 chr10 21287435 21287683 -124301605 - MIR SINE MIR 0 262 18 228 331 169 0 chr10 21288402 21288556 -124300732 + MIR SINE MIR 11 190 -72 34 42 0 0 chr10 21288613 21288661 -124300627 + AT_rich Low_complexity Low_complexity 1 48 0 184 337 116 0 chr10 21288798 21288884 -124300404 + MIR SINE MIR 40 135 -73 379 113 0 70 chr10 21291114 21291185 -124298103 + HERVH LTR ERV1 7648 7713 0 1651 98 107 87 chr10 21291185 21291624 -124297664 + LTR7 LTR ERV1 1 448 -2 371 333 92 31 chr10 21291908 21292103 -124297185 + MIR SINE MIR 46 252 -10 381 22 0 0 chr10 21292676 21292722 -124296566 + (TG)n Simple_repeat Simple_repeat 2 47 0 268 261 0 0 chr10 21292726 21292791 -124296497 + (TA)n Simple_repeat Simple_repeat 1 65 0 1840 148 0 63 chr10 21293702 21294020 -124295268 - AluJb SINE Alu -14 298 1 835 237 48 19 chr10 21295064 21295271 -124294017 + MER58A DNA MER1_type 10 222 -2 4862 134 20 27 chr10 21295883 21296849 -124292439 + L1MA5A LINE L1 5117 6080 -217 206 179 75 15 chr10 21296854 21296921 -124292367 + (TATAA)n Simple_repeat Simple_repeat 5 75 0 1168 106 26 5 chr10 21296950 21297139 -124292149 + L1MA5A LINE L1 6099 6291 -6 2290 82 0 13 chr10 21299005 21299310 -124289978 - AluY SINE Alu -8 303 3 182 324 73 0 chr10 21299480 21299548 -124289740 - MIR SINE MIR -60 148 76 336 149 45 0 chr10 21299755 21299822 -124289466 + T-rich Low_complexity Low_complexity 1 70 0 778 144 35 6 chr10 21299822 21299996 -124289292 + CT-rich Low_complexity Low_complexity 1 179 0 239 178 44 0 chr10 21301766 21301811 -124287477 - MIR SINE MIR -59 149 103 336 154 69 25 chr10 21301811 21301903 -124287385 + L1MA7 LINE L1 6020 6115 -197 900 185 28 5 chr10 21301928 21302139 -124287149 + L1MA7 LINE L1 6064 6279 -12 263 356 11 0 chr10 21302169 21302259 -124287029 - MIR SINE MIR -157 105 15 307 284 142 26 chr10 21302610 21302765 -124286523 - MER5A DNA MER1_type -16 173 1 336 24 0 0 chr10 21302826 21302867 -124286421 + (CA)n Simple_repeat Simple_repeat 2 42 0 1964 149 39 33 chr10 21304145 21304507 -124284781 - THE1B LTR MaLR 0 364 1 3951 178 61 92 chr10 21304710 21306016 -124283272 - MER11A LTR ERVK 0 1266 1 1542 137 26 26 chr10 21306095 21306366 -124282922 - MER44D DNA MER2_type -32 577 37 2982 124 4 61 chr10 21308342 21308496 -124280792 - L1PA13 LINE L1 -1 6162 6001 2438 89 0 0 chr10 21308496 21308809 -124280479 - AluSp SINE Alu 0 313 1 2982 124 4 61 chr10 21308809 21309196 -124280092 - L1PA13 LINE L1 -162 6001 5652 1382 187 41 29 chr10 21309200 21309515 -124279773 - L1MC1 LINE L1 -6 6327 6009 307 96 0 0 chr10 21309518 21309570 -124279718 - L1PB1 LINE L1 -1 6150 6099 361 136 17 0 chr10 21309570 21309629 -124279659 - L1PA13 LINE L1 -498 5663 5604 * 738 147 0 0 chr10 21309625 21309741 -124279547 + L1PA13 LINE L1 5497 5612 -549 181 298 35 35 chr10 21310627 21310684 -124278604 + L2 LINE L2 3203 3259 -13 336 332 26 4 chr10 21310710 21310845 -124278443 - MIR SINE MIR -62 146 17 335 279 60 69 chr10 21311856 21312164 -124277124 - L1M4 LINE L1 -5188 1446 996 475 259 80 12 chr10 21312874 21313036 -124276252 - MIR SINE MIR -1 261 89 186 150 0 0 chr10 21313190 21313230 -124276058 + (CATAT)n Simple_repeat Simple_repeat 3 42 0 2251 98 3 0 chr10 21313553 21313849 -124275439 + AluSx SINE Alu 1 297 -15 27 29 0 0 chr10 21315222 21315256 -124274032 + AT_rich Low_complexity Low_complexity 1 34 0 1132 145 0 0 chr10 21315257 21315416 -124273872 - AluSg/x SINE Alu -25 287 129 867 156 0 0 chr10 21316286 21316427 -124272861 - FRAM SINE Alu -15 161 21 917 174 72 62 chr10 21317831 21318063 -124271225 + AluJb SINE Alu 86 319 0 256 295 95 9 chr10 21318534 21318639 -124270649 + MER91C DNA MER1_type 1 114 -26 997 329 99 24 chr10 21318657 21319509 -124269779 + L2 LINE L2 2419 3313 0 190 370 0 0 chr10 21319954 21320008 -124269280 - L3 LINE CR1 -124 1453 1400 1093 118 0 13 chr10 21320209 21320361 -124268927 + FRAM SINE Alu 2 151 -25 580 246 106 10 chr10 21320467 21320674 -124268614 - MLT1H LTR MaLR 0 549 323 27 0 0 0 chr10 21320681 21320708 -124268580 + AT_rich Low_complexity Low_complexity 1 27 0 1966 133 34 0 chr10 21321115 21321409 -124267879 + AluSp SINE Alu 1 304 -9 270 0 0 0 chr10 21321409 21321439 -124267849 + (GA)n Simple_repeat Simple_repeat 1 30 0 * 832 73 24 0 chr10 21321437 21321561 -124267727 + (GGAA)n Simple_repeat Simple_repeat 2 128 0 1731 108 88 57 chr10 21322147 21322443 -124266845 + AluSx SINE Alu 1 305 -7 201 74 0 0 chr10 21322765 21322792 -124266496 + (TATTG)n Simple_repeat Simple_repeat 3 29 0 1797 180 0 22 chr10 21324171 21324488 -124264800 - AluJb SINE Alu -2 310 1 2571 38 0 3 chr10 21324644 21324958 -124264330 - L1PA2 LINE L1 -2 6153 5841 219 336 103 20 chr10 21327616 21327762 -124261526 - L3b LINE CR1 -166 1417 1260 28 0 0 0 chr10 21328003 21328031 -124261257 + AT_rich Low_complexity Low_complexity 1 28 0 301 280 130 20 chr10 21329310 21329510 -124259778 - L1ME LINE L1 -475 5646 5425 2077 126 3 0 chr10 21330180 21330474 -124258814 - AluSx SINE Alu -16 296 2 747 258 30 0 chr10 21330612 21330810 -124258478 + MER3 DNA MER1_type 5 208 -1 302 226 0 0 chr10 21330768 21330830 -124258458 - MER3 DNA MER1_type -119 90 29 * 43 0 0 0 chr10 21330830 21330873 -124258415 + AT_rich Low_complexity Low_complexity 1 43 0 23 78 0 0 chr10 21330949 21331000 -124258288 + AT_rich Low_complexity Low_complexity 1 51 0 555 144 0 0 chr10 21331813 21331903 -124257385 + AluJ/FLAM SINE Alu 1 90 -222 1015 161 10 10 chr10 21331903 21332095 -124257193 + L1PB4 LINE L1 5965 6156 0 502 87 0 0 chr10 21332102 21332171 -124257117 - MER39B LTR ERV1 -584 69 1 183 80 0 0 chr10 21332210 21332235 -124257053 + (A)n Simple_repeat Simple_repeat 1 25 0 825 93 60 7 chr10 21332474 21332624 -124256664 - L1MA4A LINE L1 0 6303 6146 1594 45 0 0 chr10 21334591 21334789 -124254499 + L1PA5 LINE L1 5954 6151 -3 193 367 22 0 chr10 21334844 21334934 -124254354 - L3 LINE CR1 -78 1499 1408 796 286 33 4 chr10 21335149 21335390 -124253898 - MIR SINE MIR -5 257 10 841 172 0 28 chr10 21335392 21335537 -124253751 + AluJo SINE Alu 7 147 -165 1567 179 28 10 chr10 21335537 21335827 -124253461 + AluJo SINE Alu 5 299 -13 1070 168 79 5 chr10 21336237 21336377 -124252911 - L1MA9 LINE L1 -4 6308 6145 228 35 0 0 chr10 21336377 21336406 -124252882 + (TG)n Simple_repeat Simple_repeat 2 30 0 1070 168 79 5 chr10 21336406 21336479 -124252809 - L1MA9 LINE L1 -167 6145 6079 42 57 0 0 chr10 21337397 21337467 -124251821 + AT_rich Low_complexity Low_complexity 1 70 0 1229 178 124 29 chr10 21337472 21337747 -124251541 + AluJo SINE Alu 1 301 -1 361 245 39 29 chr10 21338355 21338457 -124250831 - L2 LINE L2 -18 3295 3193 310 324 48 9 chr10 21339260 21339365 -124249923 + L2 LINE L2 3166 3274 -39 413 223 11 21 chr10 21339430 21339524 -124249764 + MER81 DNA DNA 22 114 0 257 369 8 16 chr10 21339794 21339916 -124249372 - MIR SINE MIR -65 143 23 469 254 60 40 chr10 21340902 21341103 -124248185 - L2 LINE L2 -1 3312 3108 421 378 66 33 chr10 21341258 21341879 -124247409 - L2 LINE L2 0 3313 2657 198 71 0 0 chr10 21341879 21341907 -124247381 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 421 378 66 33 chr10 21341907 21342045 -124247243 - L2 LINE L2 -656 2657 2525 270 0 0 0 chr10 21342057 21342087 -124247201 + (TG)n Simple_repeat Simple_repeat 1 30 0 768 265 56 29 chr10 21342097 21342403 -124246885 - L1ME2 LINE L1 -9 6138 5825 2461 205 43 41 chr10 21342561 21343122 -124246166 - MER77 LTR ERV1 -43 562 1 206 61 0 30 chr10 21343153 21343186 -124246102 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 227 276 9 145 chr10 21343867 21344088 -124245200 - MIR SINE MIR -21 241 51 454 301 94 42 chr10 21344890 21345465 -124243823 - L1ME2 LINE L1 -914 5215 4611 309 309 67 24 chr10 21345538 21345748 -124243540 - L1ME2 LINE L1 -3283 2846 2628 441 299 52 48 chr10 21345777 21346218 -124243070 - L1ME2 LINE L1 -4969 1150 708 442 424 118 18 chr10 21346794 21347905 -124241383 - L2 LINE L2 -955 2359 1138 189 94 0 0 chr10 21347926 21347958 -124241330 + (A)n Simple_repeat Simple_repeat 1 32 0 252 0 0 0 chr10 21349424 21349452 -124239836 + (T)n Simple_repeat Simple_repeat 1 28 0 200 145 14 43 chr10 21352289 21352358 -124236930 + CT-rich Low_complexity Low_complexity 2 68 0 363 292 25 17 chr10 21352481 21352601 -124236687 - L2 LINE L2 0 3313 3193 2386 92 0 3 chr10 21352666 21352970 -124236318 - AluSq SINE Alu -10 303 1 305 282 26 8 chr10 21353776 21353893 -124235395 - L1MA9 LINE L1 -38 6274 6156 804 156 0 15 chr10 21354534 21354669 -124234619 + FLAM_A SINE Alu 1 133 0 217 225 12 12 chr10 21354803 21354883 -124234405 + GA-rich Low_complexity Low_complexity 2 81 0 686 300 81 9 chr10 21354893 21355116 -124234172 - MIR SINE MIR -17 245 7 2212 91 3 3 chr10 21355140 21355436 -124233852 - AluSx SINE Alu -12 300 5 2212 120 3 0 chr10 21355801 21356102 -124233186 - AluSx SINE Alu -10 302 1 21 0 0 0 chr10 21356655 21356676 -124232612 + AT_rich Low_complexity Low_complexity 1 21 0 190 211 0 0 chr10 21357489 21357527 -124231761 - MER5B DNA MER1_type -2 176 139 343 330 19 0 chr10 21357570 21357673 -124231615 + MER5B DNA MER1_type 51 155 -23 302 321 0 47 chr10 21357763 21357869 -124231419 - MER5A DNA MER1_type -85 104 4 752 89 0 0 chr10 21358137 21358238 -124231050 - MER30 DNA MER1_type -129 101 1 313 182 26 39 chr10 21358301 21358378 -124230910 + MER116 DNA Mariner 5 80 0 303 368 68 76 chr10 21358965 21359375 -124229913 - L2 LINE L2 -1 3271 2865 629 345 79 32 chr10 21359449 21360106 -124229182 - L2 LINE L2 -478 2836 2149 917 107 0 8 chr10 21360112 21360243 -124229045 + AluJb SINE Alu 6 135 -177 794 101 0 106 chr10 21360636 21360863 -124228425 - L1PA8 LINE L1 -77 6095 5893 1106 290 36 28 chr10 21360864 21361254 -124228034 - L2 LINE L2 -797 2517 2125 47 33 0 0 chr10 21362238 21362299 -124226989 + AT_rich Low_complexity Low_complexity 1 61 0 2559 73 0 0 chr10 21362740 21363083 -124226205 + L1PA8 LINE L1 5830 6172 0 21 36 0 0 chr10 21364083 21364111 -124225177 + AT_rich Low_complexity Low_complexity 1 28 0 3534 131 4 4 chr10 21364313 21364872 -124224416 - L1PA13 LINE L1 0 6163 5605 1095 136 24 15 chr10 21365251 21365457 -124223831 - L1MA5 LINE L1 -2 6298 6091 26 64 0 0 chr10 21366021 21366068 -124223220 + AT_rich Low_complexity Low_complexity 1 47 0 1188 162 24 0 chr10 21366090 21366300 -124222988 - L1MA5 LINE L1 -222 6078 5864 321 303 59 34 chr10 21366334 21366453 -124222835 - MER5A DNA MER1_type -45 144 23 246 226 0 0 chr10 21367370 21367432 -124221856 - L1MC4 LINE L1 -1328 6714 6653 234 222 0 0 chr10 21367432 21367486 -124221802 + (CATATA)n Simple_repeat Simple_repeat 1 54 0 1173 15 0 0 chr10 21368366 21368499 -124220789 + L1PA5 LINE L1 6007 6139 -15 192 40 0 0 chr10 21368499 21368524 -124220764 + (TA)n Simple_repeat Simple_repeat 1 25 0 345 54 0 5 chr10 21369501 21369559 -124219729 - L1PA4 LINE L1 -145 5986 5937 1451 18 0 0 chr10 21369559 21369724 -124219564 + L1PA4 LINE L1 5987 6155 0 407 298 18 89 chr10 21369824 21370049 -124219239 - MIR SINE MIR -1 261 53 349 178 14 27 chr10 21371101 21371174 -124218114 + MER58B DNA MER1_type 262 333 -8 351 0 0 0 chr10 21372095 21372134 -124217154 + (TG)n Simple_repeat Simple_repeat 2 40 0 21 0 0 0 chr10 21372531 21372552 -124216736 + AT_rich Low_complexity Low_complexity 1 21 0 1383 12 0 6 chr10 21372552 21372715 -124216573 - L1PA5 LINE L1 -12 6142 5981 271 276 107 86 chr10 21374336 21374579 -124214709 - MIR SINE MIR -3 259 12 194 0 39 0 chr10 21375256 21375282 -124214006 + (TTTG)n Simple_repeat Simple_repeat 1 27 0 2078 101 0 7 chr10 21375284 21375560 -124213728 - AluSc SINE Alu -35 274 1 969 127 0 0 chr10 21375560 21375702 -124213586 - AluSg/x SINE Alu -9 303 162 353 21 0 0 chr10 21376362 21376410 -124212878 - L1MA3 LINE L1 0 6305 6258 447 271 31 0 chr10 21376804 21376933 -124212355 - L1M4 LINE L1 -2022 4124 3992 270 288 133 26 chr10 21377084 21377386 -124211902 + L1ME2 LINE L1 3884 4217 -1929 180 0 0 0 chr10 21378707 21378727 -124210561 + (A)n Simple_repeat Simple_repeat 1 20 0 600 264 98 71 chr10 21379105 21379578 -124209710 + L1MEc LINE L1 2065 2523 -3692 1739 150 0 72 chr10 21379578 21379912 -124209376 + AluJb SINE Alu 2 311 -1 600 264 98 71 chr10 21379912 21380187 -124209101 + L1MEc LINE L1 2523 2789 -3426 945 155 37 5 chr10 21380187 21380374 -124208914 + L1MA9 LINE L1 6120 6312 0 600 264 98 71 chr10 21380374 21380729 -124208559 + L1MEc LINE L1 2789 3206 -3009 30 27 0 0 chr10 21380729 21380766 -124208522 + AT_rich Low_complexity Low_complexity 1 37 0 600 264 98 71 chr10 21380766 21380880 -124208408 + L1MEc LINE L1 3206 3315 -2900 2368 224 65 34 chr10 21380891 21380923 -124208365 + L1ME2 LINE L1 5127 5157 -1007 1529 165 49 14 chr10 21380923 21381208 -124208080 + AluJo SINE Alu 1 295 -17 2368 224 65 34 chr10 21381208 21381572 -124207716 + L1ME2 LINE L1 5157 5508 -656 252 59 0 0 chr10 21381572 21381606 -124207682 + (CA)n Simple_repeat Simple_repeat 1 34 0 2368 224 65 34 chr10 21381606 21382078 -124207210 + L1ME2 LINE L1 5508 6152 -12 937 160 0 6 chr10 21382433 21382589 -124206699 + AluJo SINE Alu 1 155 -157 740 270 15 27 chr10 21382622 21382881 -124206407 - MIR SINE MIR -5 257 2 1742 164 0 32 chr10 21383005 21383316 -124205972 - AluJo SINE Alu -11 301 1 213 121 0 0 chr10 21383845 21383878 -124205410 + (T)n Simple_repeat Simple_repeat 1 33 0 341 301 53 15 chr10 21384702 21384835 -124204453 - MIR SINE MIR -2 260 123 33 56 0 14 chr10 21385386 21385417 -124203871 + AT_rich Low_complexity Low_complexity 1 31 -40 2095 114 0 10 chr10 21385417 21385706 -124203582 + AluSx SINE Alu 1 286 -26 33 56 0 14 chr10 21385706 21385746 -124203542 + AT_rich Low_complexity Low_complexity 31 71 0 529 174 0 31 chr10 21385953 21386051 -124203237 - AluJb SINE Alu -8 304 210 279 122 0 0 chr10 21387399 21387448 -124201840 + (TA)n Simple_repeat Simple_repeat 2 50 0 253 213 13 53 chr10 21387452 21387527 -124201761 + CT-rich Low_complexity Low_complexity 1 72 0 1967 137 0 30 chr10 21387622 21387921 -124201367 + AluSx SINE Alu 1 290 -22 340 255 0 43 chr10 21387924 21388018 -124201270 - L1MC4 LINE L1 -1339 6703 6614 338 310 10 0 chr10 21387932 21388032 -124201256 + L1MC4 LINE L1 6614 6714 -1328 * 1968 131 58 17 chr10 21388583 21388943 -124200345 - THE1C LTR MaLR 0 375 1 3222 127 21 10 chr10 21389188 21389702 -124199586 - L1PA15 LINE L1 -7 6158 5639 180 0 0 0 chr10 21389969 21389989 -124199299 + (A)n Simple_repeat Simple_repeat 1 20 0 1832 168 30 0 chr10 21390763 21391061 -124198227 + AluJo SINE Alu 3 309 -3 357 62 0 0 chr10 21391180 21391228 -124198060 + (TGGA)n Simple_repeat Simple_repeat 1 48 0 226 306 14 0 chr10 21391231 21391303 -124197985 + GA-rich Low_complexity Low_complexity 4 76 0 646 253 6 12 chr10 21391602 21391768 -124197520 - MIR SINE MIR -1 261 97 2071 103 3 7 chr10 21391978 21392269 -124197019 - AluSx SINE Alu -22 290 1 609 304 25 0 chr10 21392423 21392584 -124196704 + MIR SINE MIR 13 177 -85 2222 110 0 22 chr10 21393034 21393352 -124195936 + AluSx SINE Alu 1 311 -1 2214 107 7 0 chr10 21394091 21394389 -124194899 + AluSq SINE Alu 1 300 -13 1933 153 13 0 chr10 21395606 21395907 -124193381 - AluSx SINE Alu -7 305 1 1487 195 3 58 chr10 21396436 21396744 -124192544 + AluJb SINE Alu 6 296 -16 470 284 0 31 chr10 21397590 21397717 -124191571 - MIR3 SINE MIR -4 204 82 251 303 25 33 chr10 21398185 21398307 -124190981 - L1ME4a LINE L1 -46 6075 5955 2221 180 102 7 chr10 21398567 21399028 -124190260 - MLT1D LTR MaLR 0 505 1 299 294 0 0 chr10 21399057 21399142 -124190146 - MER104 DNA Tc2 -77 103 19 2277 110 0 13 chr10 21399240 21399549 -124189739 + AluSx SINE Alu 1 305 -7 694 300 101 0 chr10 21399670 21399907 -124189381 - MIR SINE MIR 0 262 2 185 339 54 31 chr10 21401319 21401449 -124187839 - L2 LINE L2 -1698 1616 1484 995 213 80 3 chr10 21401453 21401754 -124187534 + MER33 DNA MER1_type 1 324 0 429 241 88 58 chr10 21401899 21402036 -124187252 - L2 LINE L2 0 3313 3173 29 28 0 0 chr10 21402274 21402310 -124186978 + AT_rich Low_complexity Low_complexity 1 36 0 2051 134 0 0 chr10 21402340 21402657 -124186631 + AluSx SINE Alu 1 317 0 435 119 0 0 chr10 21404409 21404476 -124184812 + (TAGA)n Simple_repeat Simple_repeat 4 70 0 2126 141 0 0 chr10 21405361 21405673 -124183615 - AluSx SINE Alu 0 312 1 27 29 0 0 chr10 21405805 21405839 -124183449 + AT_rich Low_complexity Low_complexity 1 34 0 457 349 60 13 chr10 21406306 21406538 -124182750 + L3 LINE CR1 1290 1532 -45 251 53 0 0 chr10 21407077 21407115 -124182173 - L1MA3 LINE L1 0 6305 6268 2134 123 0 3 chr10 21407247 21407555 -124181733 - AluSg SINE Alu 0 310 4 2514 61 0 3 chr10 21407983 21408294 -124180994 + AluY SINE Alu 1 310 -1 21 36 0 0 chr10 21408667 21408695 -124180593 + AT_rich Low_complexity Low_complexity 1 28 0 4515 205 20 18 chr10 21409327 21410652 -124178636 - L1MA9 LINE L1 -36 6276 4948 2175 99 3 0 chr10 21410830 21411114 -124178174 + AluSp SINE Alu 2 286 -27 2966 174 105 79 chr10 21411194 21412290 -124176998 + L1PA12 LINE L1 1 1801 -5780 5708 101 21 8 chr10 21412291 21413725 -124175563 + L1PA14 LINE L1 4672 6152 -9 22 35 0 0 chr10 21413872 21413901 -124175387 + AT_rich Low_complexity Low_complexity 1 29 0 365 330 93 31 chr10 21414038 21414490 -124174798 + HAL1b LINE L1 128 607 -741 319 348 80 0 chr10 21415181 21415319 -124173969 + MLT1J2 LTR MaLR 255 403 -47 22 35 0 0 chr10 21415715 21415744 -124173544 + AT_rich Low_complexity Low_complexity 1 29 0 221 225 247 22 chr10 21416050 21416139 -124173149 + L2 LINE L2 3202 3310 -3 202 342 18 36 chr10 21416543 21416654 -124172634 - MIR3 SINE MIR -40 168 60 194 0 0 37 chr10 21417012 21417039 -124172249 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 562 242 15 0 chr10 21418376 21418508 -124170780 - MER94 DNA DNA 0 134 1 2014 132 0 0 chr10 21418989 21419269 -124170019 + AluSx SINE Alu 1 280 -32 273 29 0 0 chr10 21419271 21419305 -124169983 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 217 333 29 54 chr10 21419685 21419790 -124169498 - L2 LINE L2 -788 2526 2427 1959 114 82 0 chr10 21419790 21420070 -124169218 - AluSq SINE Alu -10 303 1 217 333 29 54 chr10 21420070 21420168 -124169120 - L2 LINE L2 -887 2427 2328 372 59 0 0 chr10 21420375 21420426 -124168862 + (CA)n Simple_repeat Simple_repeat 2 52 0 27 29 0 0 chr10 21421655 21421689 -124167599 + AT_rich Low_complexity Low_complexity 1 34 0 2352 231 9 6 chr10 21421870 21422394 -124166894 + MER97b DNA MER1_type? 40 565 -488 562 233 28 75 chr10 21422464 21422717 -124166571 + MER97c DNA MER1_type? 850 1090 0 218 175 0 18 chr10 21422781 21422838 -124166450 + (TA)n Simple_repeat Simple_repeat 2 57 0 1580 180 24 21 chr10 21422990 21423108 -124166180 + AluJb SINE Alu 1 117 -195 195 42 0 0 chr10 21423108 21423132 -124166156 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 1580 180 24 21 chr10 21423132 21423302 -124165986 + AluJb SINE Alu 117 290 -22 322 171 13 13 chr10 21423305 21423381 -124165907 + GA-rich Low_complexity Low_complexity 1 76 0 343 211 168 12 chr10 21424082 21424243 -124165045 - MER53 DNA DNA -3 186 1 400 244 181 31 chr10 21424518 21424678 -124164610 + MER5A DNA MER1_type 4 187 -2 2155 118 0 0 chr10 21424886 21425174 -124164114 + AluSx SINE Alu 1 288 -24 24 0 0 0 chr10 21425177 21425201 -124164087 + AT_rich Low_complexity Low_complexity 1 24 0 2164 93 4 0 chr10 21426209 21426489 -124162799 + AluSg SINE Alu 24 304 -6 270 276 0 0 chr10 21426757 21426815 -124162473 - MIR SINE MIR -64 144 87 2414 106 26 13 chr10 21427011 21427399 -124161889 - L1MA2 LINE L1 -209 6095 5703 25 0 0 0 chr10 21428603 21428628 -124160660 + AT_rich Low_complexity Low_complexity 1 25 0 186 71 0 0 chr10 21429147 21429175 -124160113 + (CAAA)n Simple_repeat Simple_repeat 4 31 0 29 28 0 0 chr10 21430160 21430196 -124159092 + AT_rich Low_complexity Low_complexity 1 36 0 1036 55 78 0 chr10 21431850 21431978 -124157310 - MER85 DNA T2_type 0 139 2 1025 189 61 0 chr10 21432148 21432344 -124156944 - MER3 DNA MER1_type -1 208 1 245 276 0 48 chr10 21432493 21432615 -124156673 + MIR SINE MIR 78 190 -72 21 0 0 0 chr10 21433143 21433164 -124156124 + AT_rich Low_complexity Low_complexity 1 21 0 255 291 13 0 chr10 21433561 21433640 -124155648 + (CATATA)n Simple_repeat Simple_repeat 2 81 0 297 0 0 0 chr10 21433662 21433695 -124155593 + (TG)n Simple_repeat Simple_repeat 2 34 0 1065 184 0 0 chr10 21433697 21433860 -124155428 + FRAM SINE Alu 1 163 -3 368 247 0 0 chr10 21433865 21433946 -124155342 - MIR3 SINE MIR -41 167 87 252 212 15 45 chr10 21434565 21434631 -124154657 - L2 LINE L2 -15 3298 3235 1723 92 4 0 chr10 21435925 21436152 -124153136 - AluSp SINE Alu -85 228 1 21 36 0 0 chr10 21439490 21439518 -124149770 + AT_rich Low_complexity Low_complexity 1 28 0 1518 185 53 20 chr10 21439643 21439945 -124149343 - AluJb SINE Alu 0 312 1 268 277 20 40 chr10 21440063 21440164 -124149124 - L2 LINE L2 -188 3084 2986 43374 53 1 4 chr10 21440724 21446885 -124142403 - L1PA4 LINE L1 -8 6147 3 390 321 144 32 chr10 21446917 21447637 -124141651 - L2 LINE L2 -896 2418 1618 319 315 98 94 chr10 21447940 21448216 -124141072 + L2 LINE L2 2996 3272 0 891 248 102 98 chr10 21448724 21449224 -124140064 + MLT1L LTR MaLR 19 520 -95 10881 72 5 13 chr10 21449349 21450770 -124138518 - L1P LINE L1 -4736 1410 1 831 124 0 0 chr10 21450778 21450891 -124138397 - AluSp/q SINE Alu -15 298 186 2922 56 56 11 chr10 21452839 21453216 -124136072 - L1PA10 LINE L1 -4 6164 5771 2174 137 0 0 chr10 21453585 21453884 -124135404 + AluSx SINE Alu 1 299 -13 332 308 69 0 chr10 21453891 21454021 -124135267 + MIR SINE MIR 76 214 -48 23 0 0 0 chr10 21454353 21454376 -124134912 + AT_rich Low_complexity Low_complexity 1 23 0 2497 226 122 14 chr10 21454689 21455409 -124133879 - MER21B LTR ERV1 -52 811 14 1503 196 3 27 chr10 21455671 21455972 -124133316 + AluJb SINE Alu 3 296 -16 194 397 0 0 chr10 21456072 21456145 -124133143 - L2 LINE L2 0 3313 3241 642 301 78 0 chr10 21456170 21456389 -124132899 - MIR SINE MIR -26 236 1 627 270 218 31 chr10 21456419 21456912 -124132376 - L2 LINE L2 -78 3235 2624 3395 132 23 0 chr10 21456955 21457439 -124131849 + MER1A DNA MER1_type 33 527 -2 1852 213 40 9 chr10 21457441 21457869 -124131419 - MER74C LTR ERVL -2 458 18 424 202 29 0 chr10 21457911 21458015 -124131273 - L2 LINE L2 -742 2572 2466 387 231 31 136 chr10 21458183 21458477 -124130811 + L1ME4a LINE L1 5630 5892 -229 249 231 51 13 chr10 21458509 21458587 -124130701 - MIR SINE MIR -2 260 180 746 204 20 7 chr10 21458945 21459097 -124130191 - Tigger2 DNA MER2_type -1 2717 2564 * 1205 134 10 14 chr10 21459094 21459303 -124129985 - Tigger2 DNA MER2_type -2510 208 1 2024 121 10 7 chr10 21459865 21460162 -124129126 + AluSg SINE Alu 1 298 -12 715 227 102 32 chr10 21460312 21460528 -124128760 + MIR SINE MIR 32 262 0 1653 232 178 29 chr10 21460545 21460787 -124128501 - MLT1H LTR MaLR 0 549 344 2810 10 0 0 chr10 21460787 21461090 -124128198 - AluY SINE Alu -8 303 1 1653 232 178 29 chr10 21461090 21461325 -124127963 - MLT1H LTR MaLR -205 344 1 304 319 38 52 chr10 21461327 21461537 -124127751 - L2 LINE L2 -1036 2278 2072 222 344 122 43 chr10 21462258 21462537 -124126751 - L2 LINE L2 -2394 920 620 2214 141 133 13 chr10 21462598 21462995 -124126293 + MER65A LTR ERV1 1 445 0 869 183 0 0 chr10 21463061 21463192 -124126096 + FLAM_A SINE Alu 1 131 -2 261 312 37 9 chr10 21463270 21463379 -124125909 + L1ME LINE L1 5454 5565 -556 1987 154 128 21 chr10 21463535 21463918 -124125370 - MSTA LTR MaLR 0 428 5 5719 129 20 14 chr10 21463918 21464797 -124124491 - MSTA-int LTR MaLR -1 1579 695 1384 142 0 5 chr10 21464781 21464993 -124124295 - MSTA-int LTR MaLR -1367 213 3 * 1730 179 130 41 chr10 21464995 21465386 -124123902 - MSTA LTR MaLR 0 428 3 326 328 61 114 chr10 21465802 21466282 -124123006 - L2 LINE L2 -20 3252 2799 403 246 242 16 chr10 21466361 21466617 -124122671 + L2 LINE L2 3000 3313 0 830 285 73 7 chr10 21467017 21467291 -124121997 - LTR16C LTR ERVL -1 490 199 4449 194 51 6 chr10 21467330 21468154 -124121134 - MER21B LTR ERV1 -2 861 1 2610 207 18 2 chr10 21468399 21468854 -124120434 - MER70A LTR ERVL -10 462 1 1802 193 0 0 chr10 21468869 21469180 -124120108 - AluJb SINE Alu 0 312 2 1984 140 0 7 chr10 21469914 21470221 -124119067 + AluSx SINE Alu 1 305 -7 843 256 122 36 chr10 21470441 21470852 -124118436 + L2 LINE L2 2867 3312 -1 2676 206 19 71 chr10 21470910 21471556 -124117732 + LTR9 LTR ERV1 1 612 0 2153 169 0 55 chr10 21473765 21474184 -124115104 - MER57A LTR ERV1 -5 398 3 498 202 0 19 chr10 21474203 21474307 -124114981 - MER57A-int LTR ERV1 -29 7508 7407 684 218 113 56 chr10 21474307 21474591 -124114697 - LTR54 LTR ERV1 -210 300 1 2842 219 43 93 chr10 21474591 21475547 -124113741 - MER57A-int LTR ERV1 -490 7326 6419 322 154 0 0 chr10 21475548 21475600 -124113688 - MER57A-int LTR ERV1 -1346 6470 6419 * 2153 205 68 14 chr10 21475569 21476037 -124113251 - MER57A-int LTR ERV1 -1251 6286 5825 4833 191 63 77 chr10 21476340 21477899 -124111389 - MER57A-int LTR ERV1 -1720 5817 4281 38 68 0 0 chr10 21478106 21478179 -124111109 + AT_rich Low_complexity Low_complexity 1 73 0 21 36 0 0 chr10 21478262 21478290 -124110998 + AT_rich Low_complexity Low_complexity 1 28 0 514 224 0 0 chr10 21478486 21478584 -124110704 - MER57A-int LTR ERV1 -2886 3445 3348 1257 204 23 66 chr10 21478608 21478912 -124110376 - MER57A-int LTR ERV1 -2960 3371 3081 495 173 36 103 chr10 21478905 21479156 -124110132 - MER57A-int LTR ERV1 -3724 1982 1083 * 849 268 70 33 chr10 21479156 21479428 -124109860 - MER34C LTR ERV1 -155 430 149 386 303 35 14 chr10 21479428 21479570 -124109718 - MER57A-int LTR ERV1 -4138 985 841 3401 231 27 38 chr10 21479680 21480518 -124108770 - MER57A-int LTR ERV1 -6708 829 1 2322 179 0 34 chr10 21480518 21480931 -124108357 - MER57A LTR ERV1 0 403 5 425 232 283 15 chr10 21481028 21481226 -124108062 + MIR SINE MIR 7 257 -5 758 202 8 0 chr10 21481416 21481545 -124107743 - FLAM_C SINE Alu -2 131 2 368 296 75 38 chr10 21481739 21481925 -124107363 - MIR SINE MIR 0 262 70 980 238 66 24 chr10 21481926 21482264 -124107024 + MSTD LTR MaLR 1 396 0 4964 238 79 35 chr10 21482266 21483925 -124105363 + MSTD-int LTR MaLR 2 1730 -5 407 204 11 21 chr10 21483934 21484027 -124105261 + MSTD LTR MaLR 5 96 -332 909 166 24 6 chr10 21484044 21484213 -124105075 + MSTD LTR MaLR 225 396 0 1078 260 28 69 chr10 21484405 21484797 -124104491 + MER72 LTR ERV1 1 376 -346 2014 199 54 14 chr10 21484930 21485356 -124103932 + MER72 LTR ERV1 279 721 -1 207 0 0 0 chr10 21486014 21486037 -124103251 + (A)n Simple_repeat Simple_repeat 1 23 0 2829 189 14 0 chr10 21486543 21487056 -124102232 + MLT2B1 LTR ERVL 1 520 0 250 271 138 55 chr10 21487159 21487340 -124101948 - L2 LINE L2 0 3313 3118 473 267 77 72 chr10 21487800 21487995 -124101293 + MIR SINE MIR 53 248 -14 39 0 0 0 chr10 21488015 21488054 -124101234 + AT_rich Low_complexity Low_complexity 1 39 0 36552 47 1 3 chr10 21488059 21492814 -124096474 - L1P LINE L1 -1398 4748 4 1795 161 0 33 chr10 21493440 21493773 -124095515 + AluJb SINE Alu 1 323 0 1545 173 106 3 chr10 21495455 21495738 -124093550 + AluJo SINE Alu 1 312 0 1313 238 36 44 chr10 21496505 21496917 -124092371 + LTR9 LTR ERV1 191 599 -13 2225 92 0 7 chr10 21496964 21497256 -124092032 + AluSp SINE Alu 12 301 -12 636 256 82 101 chr10 21498061 21498648 -124090640 + HAL1 LINE L1 1385 1960 -547 460 279 102 37 chr10 21498656 21499005 -124090283 + L1ME1 LINE L1 3583 3956 -2190 471 229 65 0 chr10 21499006 21499201 -124090087 + L1ME1 LINE L1 5221 5444 -722 877 154 15 0 chr10 21499202 21499338 -124089950 - AluJb SINE Alu -17 295 158 702 186 84 99 chr10 21499352 21499448 -124089840 + L1ME1 LINE L1 5459 5555 -611 2011 120 0 41 chr10 21499448 21499785 -124089503 - AluSc SINE Alu 0 325 1 1192 148 40 0 chr10 21499795 21499997 -124089291 - L1PB4 LINE L1 -1 6155 5946 702 186 84 99 chr10 21499997 21500151 -124089137 + L1ME1 LINE L1 5564 5717 -449 1297 210 17 33 chr10 21500151 21500640 -124088648 + MER74B LTR ERVL 53 616 -6 349 227 81 8 chr10 21500656 21500803 -124088485 + L1ME1 LINE L1 5727 5899 -285 1134 198 93 43 chr10 21500835 21500958 -124088330 + AluJo SINE Alu 11 126 -186 450 0 0 0 chr10 21500958 21501008 -124088280 + (CA)n Simple_repeat Simple_repeat 1 50 0 1134 198 93 43 chr10 21501008 21501142 -124088146 + AluJo SINE Alu 126 281 -31 948 245 42 0 chr10 21501151 21501412 -124087876 + L1ME1 LINE L1 5876 6147 -19 824 193 44 17 chr10 21501412 21501593 -124087695 - MLT1D LTR MaLR 0 505 320 2189 111 0 0 chr10 21501716 21502005 -124087283 + AluSg SINE Alu 1 289 -21 265 236 28 0 chr10 21502020 21502092 -124087196 - MLT1D LTR MaLR -357 148 75 390 253 13 0 chr10 21502097 21502176 -124087112 - MER5A DNA MER1_type -103 86 7 1573 187 0 32 chr10 21502504 21502788 -124086500 - AluJo SINE Alu -26 286 12 259 103 0 0 chr10 21503101 21503140 -124086148 - MADE1 DNA Mariner -37 43 5 512 287 58 20 chr10 21504616 21504964 -124084324 + L1ME4a LINE L1 4358 4718 -1428 424 280 107 42 chr10 21505103 21505263 -124084025 + L1ME4a LINE L1 5409 5557 -564 2147 141 33 28 chr10 21505263 21505625 -124083663 - THE1B LTR MaLR 0 364 1 424 280 107 42 chr10 21505625 21505961 -124083327 + L1ME4a LINE L1 5557 5935 -186 2068 109 9 58 chr10 21506111 21506440 -124082848 + AluSq SINE Alu 1 313 0 205 360 56 24 chr10 21507545 21507670 -124081618 + MIR SINE MIR 20 148 -114 3045 68 2 5 chr10 21507950 21508359 -124080929 + L1PA13 LINE L1 5753 6160 -3 2215 113 0 3 chr10 21509559 21509861 -124079427 - AluSx SINE Alu -11 301 1 2267 136 11 3 chr10 21510479 21510831 -124078457 + THE1A LTR MaLR 1 355 0 2671 102 0 3 chr10 21512658 21513021 -124076267 - THE1B LTR MaLR -2 362 1 755 206 0 0 chr10 21513024 21513155 -124076133 + FRAM SINE Alu 28 158 -18 556 282 83 34 chr10 21513170 21513548 -124075740 + LTR16A LTR ERVL 18 418 -32 237 319 159 14 chr10 21513676 21513814 -124075474 + MIR SINE MIR 105 262 0 2014 196 24 9 chr10 21513976 21514395 -124074893 + MSTB1 LTR MaLR 8 432 0 23 0 0 0 chr10 21515288 21515311 -124073977 + AT_rich Low_complexity Low_complexity 1 23 0 562 307 133 16 chr10 21515710 21516199 -124073089 - L1ME LINE L1 -359 5803 5258 25 51 0 0 chr10 21516220 21516259 -124073029 + AT_rich Low_complexity Low_complexity 1 39 0 13133 188 35 22 chr10 21516470 21519487 -124069801 - L1PB1 LINE L1 0 6867 3890 180 0 0 0 chr10 21519487 21519507 -124069781 + (TTG)n Simple_repeat Simple_repeat 2 21 0 13133 188 35 22 chr10 21519507 21522863 -124066425 - L1PB1 LINE L1 -2977 3890 216 3367 69 5 7 chr10 21522863 21523312 -124065976 - LTR7 LTR ERV1 -2 448 1 13133 188 35 22 chr10 21523312 21523526 -124065762 - L1PB1 LINE L1 -6651 216 6 499 323 101 46 chr10 21523537 21524064 -124065224 - L1ME LINE L1 -1194 4952 4409 516 257 28 86 chr10 21524196 21524523 -124064765 - L1ME LINE L1 -1985 4161 3854 293 188 0 14 chr10 21524946 21525015 -124064273 - MER41B LTR ERV1 -310 325 258 2137 101 0 44 chr10 21525122 21525442 -124063846 - AluSp SINE Alu 0 307 1 494 331 61 27 chr10 21525821 21526196 -124063092 - L1ME LINE L1 -2320 3826 3439 243 284 134 25 chr10 21526237 21526505 -124062783 - L1ME LINE L1 -2751 3395 3069 1795 150 97 29 chr10 21526505 21526845 -124062443 - THE1B LTR MaLR -1 363 1 243 284 134 25 chr10 21526845 21526970 -124062318 - L1ME LINE L1 -3077 3069 2959 2031 238 73 18 chr10 21527059 21527996 -124061292 - L1ME1 LINE L1 -179 5987 5008 306 329 142 15 chr10 21528268 21528542 -124060746 - L1ME3 LINE L1 -211 5951 5643 664 252 28 8 chr10 21528585 21528835 -124060453 - L1ME3 LINE L1 -563 5607 5353 3648 139 11 26 chr10 21528849 21529310 -124059978 - Tigger1 DNA MER2_type -7 2411 1961 2398 73 0 3 chr10 21529310 21529610 -124059678 + AluY SINE Alu 1 299 -12 3648 139 11 26 chr10 21529610 21529790 -124059498 - Tigger1 DNA MER2_type -457 1961 1780 610 254 244 3 chr10 21529852 21530151 -124059137 - HsTC2 DNA Tc2 -1508 390 20 345 298 39 0 chr10 21530163 21530267 -124059021 + MER81 DNA DNA 1 108 -6 2774 13 0 3 chr10 21530334 21530643 -124058645 + AluYa5 SINE Alu 1 308 -3 306 324 76 36 chr10 21530921 21531171 -124058117 - L2 LINE L2 -58 3255 2996 2325 111 0 0 chr10 21531327 21531634 -124057654 - AluSx SINE Alu -5 307 1 460 88 71 80 chr10 21531641 21531754 -124057534 + L1MA9 LINE L1 6129 6240 -72 253 110 68 0 chr10 21531754 21531827 -124057461 + (TA)n Simple_repeat Simple_repeat 1 78 0 226 132 113 0 chr10 21531830 21531883 -124057405 - L1MA9 LINE L1 -9 6303 6245 240 122 102 0 chr10 21531894 21531943 -124057345 + L1MA9 LINE L1 6256 6309 -3 346 284 98 76 chr10 21532076 21532351 -124056937 - L1MEd LINE L1 -5555 564 284 345 293 65 16 chr10 21532505 21532628 -124056660 - L1MEd LINE L1 -5922 197 69 241 302 127 16 chr10 21533220 21533346 -124055942 + MIR SINE MIR 2 141 -121 286 367 51 0 chr10 21533575 21533673 -124055615 + L2 LINE L2 3116 3218 -54 276 30 0 0 chr10 21534061 21534094 -124055194 + (TG)n Simple_repeat Simple_repeat 2 34 0 2680 88 3 0 chr10 21534631 21534985 -124054303 - THE1A LTR MaLR 0 355 1 279 109 250 0 chr10 21535193 21535257 -124054031 + MADE1 DNA Mariner 1 80 0 1540 191 28 58 chr10 21535508 21535870 -124053418 + MLT2B3 LTR ERVL 204 554 0 3801 239 78 70 chr10 21535870 21537591 -124051697 + MLT1A1-int LTR MaLR 1 1735 0 1233 164 38 116 chr10 21537596 21537992 -124051296 + MLT1A1 LTR MaLR 1 365 0 3331 287 67 16 chr10 21538046 21539217 -124050071 - L2 LINE L2 -384 2930 1701 286 333 133 6 chr10 21539935 21540100 -124049188 - MIR SINE MIR -21 241 56 277 388 23 0 chr10 21541167 21541296 -124047992 - L2 LINE L2 -957 2357 2226 381 328 140 8 chr10 21541641 21541906 -124047382 - L1M4 LINE L1 -1550 4596 4297 226 185 65 65 chr10 21542022 21542114 -124047174 + L1M4 LINE L1 4725 4816 -1330 439 314 79 60 chr10 21542184 21542604 -124046684 + L1M4 LINE L1 4878 5305 -841 21 0 0 0 chr10 21542704 21542725 -124046563 + AT_rich Low_complexity Low_complexity 1 21 0 363 317 90 64 chr10 21543760 21544369 -124044919 + L1ME LINE L1 4676 5300 -846 274 381 17 0 chr10 21544517 21544698 -124044590 + L1ME LINE L1 5465 5648 -514 741 319 126 17 chr10 21544952 21545357 -124043931 - MLT1G1 LTR MaLR 0 595 147 283 246 71 56 chr10 21545485 21545611 -124043677 - MLT1G1-int LTR MaLR -30 1341 1214 406 269 0 9 chr10 21546470 21546578 -124042710 - MLT1G1-int LTR MaLR -826 545 439 634 308 147 8 chr10 21546978 21547345 -124041943 - L2 LINE L2 -908 2406 1989 1973 130 43 10 chr10 21547351 21547652 -124041636 + AluSx SINE Alu 1 311 -1 3715 133 14 67 chr10 21549655 21549813 -124039475 + L1MA8 LINE L1 5548 5713 -578 1358 222 21 21 chr10 21549813 21549967 -124039321 - AluJo SINE Alu -24 288 132 207 0 0 0 chr10 21549967 21549990 -124039298 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1358 222 21 21 chr10 21549990 21550123 -124039165 - AluJo SINE Alu -179 133 1 3715 133 14 67 chr10 21550123 21550476 -124038812 + L1MA8 LINE L1 5713 6008 -283 2497 64 0 0 chr10 21550476 21550787 -124038501 + AluY SINE Alu 1 311 0 3715 133 14 67 chr10 21550787 21551039 -124038249 + L1MA8 LINE L1 6008 6272 -19 308 268 57 8 chr10 21551052 21551175 -124038113 + L1ME4a LINE L1 5960 6088 -33 25 31 0 0 chr10 21551207 21551239 -124038049 + AT_rich Low_complexity Low_complexity 1 32 0 2160 129 3 3 chr10 21551451 21551753 -124037535 + AluSx SINE Alu 1 302 -10 638 282 60 30 chr10 21552272 21552506 -124036782 - MIR SINE MIR -20 242 2 2117 127 7 3 chr10 21553687 21553986 -124035302 + AluSx SINE Alu 1 300 -12 23 33 0 0 chr10 21554642 21554672 -124034616 + AT_rich Low_complexity Low_complexity 1 30 0 2223 124 0 0 chr10 21555188 21555495 -124033793 + AluSg SINE Alu 1 307 -3 240 35 0 0 chr10 21556414 21556443 -124032845 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 351 325 52 100 chr10 21556780 21556859 -124032429 + L2 LINE L2 2997 3078 -194 1218 205 46 60 chr10 21556859 21557229 -124032059 + MLT1A1 LTR MaLR 1 365 0 351 325 52 100 chr10 21557229 21557438 -124031850 + L2 LINE L2 3078 3271 -1 216 0 0 0 chr10 21557661 21557685 -124031603 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 566 63 13 0 chr10 21557873 21557952 -124031336 + (TTTCC)n Simple_repeat Simple_repeat 5 84 0 690 13 0 0 chr10 21558088 21558167 -124031121 + (TTTCC)n Simple_repeat Simple_repeat 3 81 0 22 35 0 0 chr10 21559989 21560018 -124029270 + AT_rich Low_complexity Low_complexity 1 29 0 323 231 26 0 chr10 21560105 21560183 -124029105 - L1MB8 LINE L1 -6 6172 6093 2254 153 19 2 chr10 21560215 21560632 -124028656 - L1MB4 LINE L1 -33 6147 5724 775 133 24 12 chr10 21562281 21562447 -124026841 + CT-rich Low_complexity Low_complexity 1 168 0 1003 180 84 63 chr10 21562447 21562686 -124026602 - AluJo SINE Alu -18 294 51 633 154 0 0 chr10 21564979 21565083 -124024205 - MER5A DNA MER1_type -83 106 3 2229 129 3 0 chr10 21565677 21565980 -124023308 - AluSp SINE Alu -9 304 1 28 48 0 0 chr10 21566047 21566089 -124023199 + AT_rich Low_complexity Low_complexity 1 42 0 5689 101 18 9 chr10 21566705 21567734 -124021554 + L1PA10 LINE L1 5135 6172 0 2215 96 13 7 chr10 21568116 21568419 -124020869 + AluSx SINE Alu 1 305 -7 1927 149 7 3 chr10 21569241 21569550 -124019738 - AluSq SINE Alu -3 310 1 1985 173 5 16 chr10 21569613 21569982 -124019306 + MLT1A1 LTR MaLR 1 365 0 320 328 72 8 chr10 21569995 21570120 -124019168 - L2 LINE L2 0 3272 3140 1684 162 23 42 chr10 21570293 21570602 -124018686 + AluJo SINE Alu 1 303 -9 321 26 0 0 chr10 21570632 21570670 -124018618 + (CA)n Simple_repeat Simple_repeat 1 38 0 1906 254 27 24 chr10 21571445 21572146 -124017142 + L1M4 LINE L1 4594 5296 -850 * 6603 42 1 8 chr10 21572144 21573014 -124016274 - L1PA5 LINE L1 -1048 5098 4235 7406 41 1 1 chr10 21573014 21574061 -124015227 + L1PA5 LINE L1 5106 6152 -2 7962 214 23 12 chr10 21574095 21576012 -124013276 - L1PA15 LINE L1 -2 6163 4217 2297 74 14 0 chr10 21576012 21576308 -124012980 - AluY SINE Alu -11 300 1 7962 214 23 12 chr10 21576308 21577211 -124012077 - L1PA15 LINE L1 -1948 4217 3326 216 0 0 0 chr10 21577315 21577339 -124011949 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 26 0 0 0 chr10 21577339 21577365 -124011923 + AT_rich Low_complexity Low_complexity 1 26 0 2345 82 0 22 chr10 21577635 21577953 -124011335 - AluY SINE Alu 0 311 1 1577 247 87 49 chr10 21578406 21578809 -124010479 + L1MEc LINE L1 425 811 -5585 291 28 0 0 chr10 21578809 21578845 -124010443 + (TA)n Simple_repeat Simple_repeat 1 36 0 1577 247 87 49 chr10 21578845 21580050 -124009238 + L1MEc LINE L1 811 2167 -4229 2227 116 0 0 chr10 21580050 21580344 -124008944 + AluSc SINE Alu 1 294 -15 1577 247 87 49 chr10 21580344 21580635 -124008653 + L1MEc LINE L1 2167 2445 -3951 263 278 11 0 chr10 21580806 21580896 -124008392 + L1MEc LINE L1 2567 2657 -3558 955 235 29 7 chr10 21580911 21581183 -124008105 + L1MEc LINE L1 3572 3849 -2366 1494 226 7 0 chr10 21581194 21581482 -124007806 + AluJo SINE Alu 3 292 -20 24 32 0 0 chr10 21581538 21581569 -124007719 + AT_rich Low_complexity Low_complexity 1 31 0 4031 116 14 5 chr10 21582180 21582799 -124006489 + L1PA13 LINE L1 5537 6161 -2 704 109 0 179 chr10 21583317 21583501 -124005787 + MLT2A1 LTR ERVL 294 444 0 227 284 74 0 chr10 21584451 21584546 -124004742 - L1ME4a LINE L1 -53 6068 5967 7015 201 115 30 chr10 21584585 21585105 -124004183 + Tigger1 DNA MER2_type 1 475 -1943 2618 95 33 0 chr10 21585105 21585495 -124003793 + MLT2A2 LTR ERVL 1 403 -50 7015 201 115 30 chr10 21585495 21586813 -124002475 + Tigger1 DNA MER2_type 475 2417 -1 418 273 78 55 chr10 21586829 21587262 -124002026 - L1ME4a LINE L1 -234 5887 5445 439 336 75 29 chr10 21587265 21587545 -124001743 + L1M4 LINE L1 4544 4836 -1310 697 330 94 15 chr10 21587726 21587948 -124001340 + L2 LINE L2 2874 3077 -236 2077 151 3 0 chr10 21587948 21588253 -124001035 - AluSq SINE Alu -7 306 1 697 330 94 15 chr10 21588253 21588436 -124000852 + L2 LINE L2 3077 3311 -2 22 0 0 0 chr10 21588984 21589006 -124000282 + AT_rich Low_complexity Low_complexity 1 22 0 2776 88 3 0 chr10 21589507 21589869 -123999419 + THE1B LTR MaLR 1 363 -1 408 297 91 67 chr10 21590136 21590309 -123998979 - MIR SINE MIR 0 262 71 780 109 86 0 chr10 21590309 21590437 -123998851 + MER85 DNA T2_type 1 139 0 408 297 91 67 chr10 21590437 21590510 -123998778 - MIR SINE MIR -191 71 1 1117 201 122 43 chr10 21590593 21590915 -123998373 - MLT1C LTR MaLR 0 405 101 1889 159 7 19 chr10 21590915 21591224 -123998064 - AluSx SINE Alu -5 307 3 1117 201 122 43 chr10 21591224 21591326 -123997962 - MLT1C LTR MaLR -304 101 8 1726 170 18 14 chr10 21591780 21592095 -123997193 + AluSx SINE Alu 1 316 0 1569 151 14 51 chr10 21593643 21593935 -123995353 + AluJo SINE Alu 26 306 -6 1236 275 22 24 chr10 21594462 21594873 -123994415 - LTR40a LTR ERVL -14 505 96 8428 153 12 5 chr10 21594926 21595027 -123994261 + Tigger3(Golem) DNA MER2_type 1 100 -2929 2434 133 68 2 chr10 21595027 21595456 -123993832 + MSTB2 LTR MaLR 1 457 0 8428 153 12 5 chr10 21595456 21596791 -123992497 + Tigger3(Golem) DNA MER2_type 100 1447 -1582 3164 135 13 26 chr10 21596795 21597401 -123991887 + Tigger3(Golem) DNA MER2_type 1558 2155 -874 1690 152 0 17 chr10 21597773 21598069 -123991219 - L1PB4 LINE L1 -7 6149 5859 270 244 111 44 chr10 21599414 21599504 -123989784 + MIR SINE MIR 39 134 -128 23833 46 6 0 chr10 21599621 21602810 -123986478 + L1P LINE L1 1239 4446 -1700 2248 153 12 75 chr10 21603132 21603740 -123985548 - L1MCb LINE L1 -4878 1167 709 923 224 32 8 chr10 21603731 21603981 -123985307 - L1MCb LINE L1 -6152 412 157 * 23 33 0 0 chr10 21604013 21604043 -123985245 + AT_rich Low_complexity Low_complexity 1 30 0 352 293 20 27 chr10 21604392 21604542 -123984746 - MIR SINE MIR -24 238 90 655 169 19 50 chr10 21604547 21604707 -123984581 - MER33 DNA MER1_type -169 155 1 567 282 115 4 chr10 21604795 21605029 -123984259 - MIR SINE MIR 0 262 3 313 358 74 18 chr10 21605883 21606112 -123983176 - MIR SINE MIR -1 261 20 353 294 111 7 chr10 21606136 21606284 -123983004 - MIR SINE MIR -73 135 9 22 0 0 0 chr10 21606995 21607017 -123982271 + AT_rich Low_complexity Low_complexity 1 22 0 278 290 40 30 chr10 21607158 21607358 -123981930 - L1ME2 LINE L1 -232 5932 5731 1329 202 95 26 chr10 21607436 21607783 -123981505 - MLT1B LTR MaLR -19 371 1 344 304 212 0 chr10 21607810 21607994 -123981294 + MIR SINE MIR 16 238 -24 1653 183 0 11 chr10 21608044 21608318 -123980970 + AluJo SINE Alu 11 281 -31 301 383 10 0 chr10 21608339 21608532 -123980756 - L1ME2 LINE L1 -2169 5639 5445 339 318 7 61 chr10 21608776 21608924 -123980364 - MER5A DNA MER1_type 0 189 50 183 316 41 31 chr10 21609094 21609192 -123980096 + MIR3 SINE MIR 105 203 -5 349 259 127 0 chr10 21609744 21609910 -123979378 + L1ME LINE L1 5476 5662 -459 2059 136 0 3 chr10 21610201 21610487 -123978801 + AluSx SINE Alu 1 285 -27 27 0 0 0 chr10 21610487 21610514 -123978774 + AT_rich Low_complexity Low_complexity 1 27 0 251 263 0 0 chr10 21611270 21611327 -123977961 + CT-rich Low_complexity Low_complexity 2 58 0 1436 100 50 5 chr10 21611380 21611600 -123977688 + MER30 DNA MER1_type 1 230 0 21 0 0 0 chr10 21612153 21612174 -123977114 + AT_rich Low_complexity Low_complexity 1 21 0 3203 187 30 3 chr10 21613146 21613789 -123975499 - LTR62 LTR ERVK -8 711 52 2311 64 0 3 chr10 21614992 21615295 -123973993 + AluY SINE Alu 2 303 0 12300 77 3 4 chr10 21615450 21617133 -123972155 + L1P LINE L1 1 1681 -4465 38561 51 2 2 chr10 21617325 21622390 -123966898 - L1P LINE L1 -1083 5063 1 1195 214 29 63 chr10 21622542 21622626 -123966662 + MLT1A1 LTR MaLR 1 86 -279 1798 184 0 0 chr10 21622626 21622939 -123966349 - AluSx SINE Alu 0 315 3 1195 214 29 63 chr10 21622939 21623006 -123966282 + MLT1A1 LTR MaLR 86 154 -211 1836 139 78 20 chr10 21623006 21623350 -123965938 + THE1B LTR MaLR 1 364 0 1195 214 29 63 chr10 21623350 21623574 -123965714 + MLT1A1 LTR MaLR 154 365 0 1597 189 7 23 chr10 21624349 21624650 -123964638 - AluJb SINE Alu -16 296 1 225 200 20 0 chr10 21624876 21624926 -123964362 + CT-rich Low_complexity Low_complexity 2 52 0 206 209 47 0 chr10 21625167 21625210 -123964078 + MER5A DNA MER1_type 144 188 -1 685 329 27 9 chr10 21627531 21627750 -123961538 + MIR SINE MIR 1 223 -39 2223 146 72 0 chr10 21627764 21628168 -123961120 - MER1A DNA MER1_type 0 529 97 251 75 25 0 chr10 21628286 21628326 -123960962 - LTR62 LTR ERVK -668 51 11 393 318 43 2 chr10 21628781 21628951 -123960337 - MIR3 SINE MIR -44 218 33 23 68 0 0 chr10 21630170 21630214 -123959074 + AT_rich Low_complexity Low_complexity 1 44 0 4154 173 48 46 chr10 21630276 21630770 -123958518 + L1MA10 LINE L1 4456 4948 -1386 180 0 0 0 chr10 21630770 21630790 -123958498 + (CA)n Simple_repeat Simple_repeat 1 20 0 4154 173 48 46 chr10 21630790 21631413 -123957875 + L1MA10 LINE L1 4948 5569 -765 1989 135 3 0 chr10 21631413 21631820 -123957468 + AluSx SINE Alu 1 408 0 4154 173 48 46 chr10 21631820 21632268 -123957020 + L1MA10 LINE L1 5569 6032 -302 1865 141 44 56 chr10 21632268 21632609 -123956679 + MER1B DNA MER1_type 1 337 0 4154 173 48 46 chr10 21632609 21632911 -123956377 + L1MA10 LINE L1 6032 6332 -2 1343 168 23 61 chr10 21634023 21634187 -123955101 - AluJo SINE Alu -31 281 129 378 0 0 0 chr10 21634187 21634229 -123955059 + (TA)n Simple_repeat Simple_repeat 2 43 0 1343 168 23 61 chr10 21634229 21634326 -123954962 - AluJo SINE Alu -183 129 30 181 303 28 55 chr10 21636603 21636712 -123952576 - MIR SINE MIR -104 158 53 31180 48 3 1 chr10 21637026 21641959 -123947329 - L1PA4 LINE L1 -3 6152 1210 11705 28 1 15 chr10 21642603 21644769 -123944519 + L1PA4 LINE L1 3998 6152 -3 536 277 27 0 chr10 21644947 21645131 -123944157 - MER5A DNA MER1_type 0 189 1 558 307 47 43 chr10 21645222 21645479 -123943809 + MIR SINE MIR 2 259 -3 2102 104 0 44 chr10 21645479 21645796 -123943492 + AluY SINE Alu 1 303 -8 1620 302 167 7 chr10 21645856 21646538 -123942750 + L2 LINE L2 520 1310 -2004 251 347 24 16 chr10 21646634 21646758 -123942530 + LTR16C LTR ERVL 65 189 -302 1587 205 36 31 chr10 21647781 21648230 -123941058 - MLT1C LTR MaLR -9 458 8 703 271 34 30 chr10 21648771 21649040 -123940248 + MLT1I LTR MaLR 1 270 -139 23 0 0 0 chr10 21649496 21649519 -123939769 + AT_rich Low_complexity Low_complexity 1 23 0 214 370 0 12 chr10 21651099 21651180 -123938108 - MIR3 SINE MIR -9 199 120 2192 125 0 13 chr10 21651879 21652191 -123937097 - AluSq SINE Alu -5 308 1 652 180 0 23 chr10 21652229 21652357 -123936931 - MER94 DNA DNA -2 132 8 1604 123 29 48 chr10 21652531 21652841 -123936447 + L1MA1 LINE L1 5997 6300 -2 2756 222 58 9 chr10 21652987 21653744 -123935544 + L1PB3 LINE L1 5358 6151 -3 1067 229 0 8 chr10 21654240 21654484 -123934804 - L1PB4 LINE L1 -3 6153 5912 265 282 14 0 chr10 21655492 21655563 -123933725 + MIR3 SINE MIR 122 193 -15 284 250 111 76 chr10 21656091 21656235 -123933053 + MIR3 SINE MIR 13 161 -47 330 182 0 0 chr10 21656588 21656654 -123932634 + (TA)n Simple_repeat Simple_repeat 1 66 0 1632 62 5 0 chr10 21656654 21656865 -123932423 - L1PA5 LINE L1 -15 6139 5928 1780 28 5 0 chr10 21656867 21657084 -123932204 + L1P2 LINE L1 5490 5707 -447 682 196 18 105 chr10 21657738 21657967 -123931321 + MER3 DNA MER1_type 1 209 0 229 182 0 91 chr10 21657978 21658033 -123931255 - MLT1J1 LTR MaLR -393 53 4 24 0 0 0 chr10 21658636 21658660 -123930628 + AT_rich Low_complexity Low_complexity 1 24 0 700 186 32 0 chr10 21659534 21659658 -123929630 + FLAM_C SINE Alu 2 129 -14 357 174 0 0 chr10 21659659 21659728 -123929560 + (CATA)n Simple_repeat Simple_repeat 2 70 0 21 0 0 0 chr10 21660139 21660160 -123929128 + AT_rich Low_complexity Low_complexity 1 21 0 643 270 30 100 chr10 21660160 21660263 -123929025 - MIR SINE MIR -3 259 150 2347 123 34 14 chr10 21660263 21660620 -123928668 - THE1B LTR MaLR 0 364 1 643 270 30 100 chr10 21660620 21660804 -123928484 - MIR SINE MIR -112 150 3 197 257 0 0 chr10 21660841 21660876 -123928412 + L2 LINE L2 3211 3245 -27 1687 192 69 5 chr10 21661135 21661510 -123927778 - MLT1D LTR MaLR -106 399 1 180 0 0 0 chr10 21662106 21662126 -123927162 + (A)n Simple_repeat Simple_repeat 1 20 0 442 296 155 24 chr10 21662126 21662332 -123926956 + MIR SINE MIR 20 252 -10 555 271 66 6 chr10 21662978 21663159 -123926129 - Charlie8 DNA MER1_type -2193 224 33 754 152 7 7 chr10 21663941 21664079 -123925209 - L1PB2 LINE L1 -2 6149 6012 5887 264 36 18 chr10 21664184 21667705 -123921583 - L1PA13 LINE L1 -2777 4020 1 1514 188 0 0 chr10 21667720 21667996 -123921292 + L1MC/D LINE L1 5311 5586 -758 396 200 30 0 chr10 21667996 21668091 -123921197 + L1MC2 LINE L1 6242 6344 0 21 0 0 0 chr10 21668142 21668163 -123921125 + AT_rich Low_complexity Low_complexity 1 21 0 244 252 39 19 chr10 21669366 21669469 -123919819 + L1ME LINE L1 5410 5514 -648 2096 219 99 10 chr10 21669665 21670475 -123918813 - L1ME1 LINE L1 -143 6023 5135 185 309 0 0 chr10 21670906 21670961 -123918327 - MIR SINE MIR -6 256 202 369 391 21 11 chr10 21671286 21671475 -123917813 - MIR SINE MIR -49 213 23 379 272 132 44 chr10 21672480 21672730 -123916558 + L2 LINE L2 2332 2603 -711 766 178 76 23 chr10 21672841 21673105 -123916183 - MER33 DNA MER1_type 0 324 47 2222 178 19 9 chr10 21674260 21674681 -123914607 + MSTB LTR MaLR 1 425 -1 240 300 9 9 chr10 21675935 21676045 -123913243 - L1MC4 LINE L1 0 8042 7933 521 246 60 32 chr10 21676093 21676341 -123912947 - L1MC4 LINE L1 -190 7852 7598 24 0 0 0 chr10 21676347 21676371 -123912917 + AT_rich Low_complexity Low_complexity 1 24 0 269 23 0 70 chr10 21676372 21676415 -123912873 + (TTTTA)n Simple_repeat Simple_repeat 2 41 0 8923 31 0 0 chr10 21676415 21678257 -123911031 - L1PA4 LINE L1 -4 6151 4305 27722 59 2 7 chr10 21678257 21682029 -123907259 - L1PA4 LINE L1 -2388 3758 7 23 0 0 0 chr10 21682184 21682207 -123907081 + AT_rich Low_complexity Low_complexity 1 23 0 2136 123 0 3 chr10 21683120 21683421 -123905867 + AluSc SINE Alu 1 300 -9 1345 221 17 25 chr10 21684050 21684407 -123904881 + MLT1A1 LTR MaLR 1 354 -11 265 338 100 23 chr10 21685359 21685565 -123903723 - MIR SINE MIR -36 226 2 1034 311 95 7 chr10 21685698 21686351 -123902937 - L2 LINE L2 -37 3276 2557 282 143 0 0 chr10 21687093 21687142 -123902146 + (A)n Simple_repeat Simple_repeat 1 49 0 415 189 7 115 chr10 21687855 21688003 -123901285 + MLT1E2 LTR MaLR 18 149 -477 1414 135 0 0 chr10 21688952 21689152 -123900136 + AluSx SINE Alu 12 211 -101 24 0 0 0 chr10 21689152 21689176 -123900112 + AT_rich Low_complexity Low_complexity 1 24 0 1390 224 78 20 chr10 21690001 21690399 -123898889 + L1MB8 LINE L1 5406 5826 -352 * 1580 171 55 64 chr10 21690393 21690531 -123898757 + L1MB8 LINE L1 5762 5900 -278 2175 140 0 0 chr10 21690531 21690839 -123898449 - AluSq SINE Alu -5 308 1 1580 171 55 64 chr10 21690839 21691121 -123898167 + L1MB8 LINE L1 5900 6178 0 231 213 0 0 chr10 21692022 21692069 -123897219 + L1MB8 LINE L1 6132 6178 0 423 133 76 38 chr10 21692142 21692247 -123897041 - L1MB8 LINE L1 -11 6167 6059 279 0 0 0 chr10 21693336 21693367 -123895921 + (T)n Simple_repeat Simple_repeat 1 31 0 421 260 102 0 chr10 21746580 21746757 -123842531 + L1ME4a LINE L1 5750 5944 -177 23 33 0 0 chr10 21746816 21746846 -123842442 + AT_rich Low_complexity Low_complexity 1 30 0 264 100 0 0 chr10 21747887 21747927 -123841361 + (ATG)n Simple_repeat Simple_repeat 3 42 0 1999 146 7 0 chr10 21748129 21748438 -123840850 - AluSx SINE Alu 0 312 2 23 0 0 0 chr10 21748449 21748472 -123840816 + AT_rich Low_complexity Low_complexity 1 23 0 201 245 38 9 chr10 21749118 21749224 -123840064 + (TA)n Simple_repeat Simple_repeat 1 109 0 384 298 38 0 chr10 21749290 21749448 -123839840 + LTR65 LTR ERV1 1 164 -505 240 125 100 0 chr10 21749986 21750026 -123839262 + LTR65 LTR ERV1 605 648 -21 351 0 0 0 chr10 21750040 21750079 -123839209 + (CA)n Simple_repeat Simple_repeat 2 40 0 219 170 0 0 chr10 21750649 21750696 -123838592 + (AACTG)n Simple_repeat Simple_repeat 4 50 0 411 293 61 57 chr10 21751115 21751327 -123837961 - MIR SINE MIR -14 248 36 2110 157 0 0 chr10 21751453 21751765 -123837523 + AluSx SINE Alu 1 312 0 21 0 0 0 chr10 21751943 21751964 -123837324 + AT_rich Low_complexity Low_complexity 1 21 0 729 275 168 42 chr10 21752777 21753497 -123835791 - HAL1 LINE L1 0 2507 1697 655 216 42 85 chr10 21753554 21753813 -123835475 - HAL1 LINE L1 -921 1586 1339 1099 213 37 54 chr10 21753925 21754221 -123835067 - MER21B LTR ERV1 -107 756 466 1084 243 13 59 chr10 21754334 21754604 -123834684 - MER21B LTR ERV1 -573 290 34 2688 108 6 0 chr10 21754604 21754966 -123834322 + THE1B LTR MaLR 1 364 0 1084 243 13 59 chr10 21754966 21754999 -123834289 - MER21B LTR ERV1 -829 34 1 242 189 21 53 chr10 21755007 21755102 -123834186 - HAL1 LINE L1 -1163 1344 1253 308 240 62 129 chr10 21755209 21755434 -123833854 - HAL1 LINE L1 -2275 232 23 2192 205 36 71 chr10 21755435 21756068 -123833220 + LTR9 LTR ERV1 2 612 0 259 360 72 0 chr10 21758178 21758289 -123830999 + L2 LINE L2 3147 3265 -7 2153 85 4 7 chr10 21759523 21759831 -123829457 - AluSc SINE Alu 0 307 1 2621 259 126 13 chr10 21760547 21761522 -123827766 + L2 LINE L2 1812 2896 -418 269 304 140 49 chr10 21761546 21761789 -123827499 + L2 LINE L2 3049 3313 0 1045 279 97 66 chr10 21761800 21762235 -123827053 + L2 LINE L2 2422 2842 -471 793 197 0 0 chr10 21762235 21762367 -123826921 - FLAM_C SINE Alu -1 132 1 1045 279 97 66 chr10 21762367 21762816 -123826472 + L2 LINE L2 2842 3312 -1 219 69 0 0 chr10 21764029 21764058 -123825230 + (T)n Simple_repeat Simple_repeat 1 29 0 27 62 0 0 chr10 21764898 21764946 -123824342 + AT_rich Low_complexity Low_complexity 1 48 0 21 57 0 0 chr10 21765088 21765123 -123824165 + AT_rich Low_complexity Low_complexity 1 35 0 210 208 0 0 chr10 21765663 21765716 -123823572 + (CA)n Simple_repeat Simple_repeat 2 54 0 22 35 0 0 chr10 21765761 21765790 -123823498 + AT_rich Low_complexity Low_complexity 1 29 0 1699 256 156 18 chr10 21765849 21765937 -123823351 - L1MC4a LINE L1 -1732 6076 6002 1800 165 14 22 chr10 21765937 21766295 -123822993 - THE1A LTR MaLR 0 355 1 1699 256 156 18 chr10 21766295 21766929 -123822359 - L1MC4a LINE L1 -1806 6002 5254 326 320 82 70 chr10 21767181 21767753 -123821535 - L1MC4a LINE L1 -1158 4988 4410 411 304 67 42 chr10 21767889 21768202 -123821086 - HAL1b LINE L1 -807 541 221 248 269 64 57 chr10 21768294 21768435 -123820853 - MIR SINE MIR -10 252 111 196 347 0 13 chr10 21768939 21769014 -123820274 - MIR3 SINE MIR -46 162 89 27 49 0 0 chr10 21770402 21770443 -123818845 + AT_rich Low_complexity Low_complexity 1 41 0 1760 183 10 3 chr10 21770840 21771140 -123818148 - AluJo SINE Alu -6 306 5 210 208 62 0 chr10 21772973 21773021 -123816267 - L2 LINE L2 0 3272 3222 201 147 0 0 chr10 21773143 21773177 -123816111 + (CATA)n Simple_repeat Simple_repeat 2 35 0 568 270 74 38 chr10 21774853 21775079 -123814209 + MIR SINE MIR 26 256 -6 348 312 15 50 chr10 21775542 21775744 -123813544 - L2 LINE L2 0 3313 3119 4699 288 112 22 chr10 21777080 21778448 -123810840 - L2 LINE L2 -6 3307 2064 1789 156 111 26 chr10 21778448 21778827 -123810461 - MLT2D LTR ERVL 0 414 4 4699 288 112 22 chr10 21778827 21778929 -123810359 - L2 LINE L2 -1249 2064 1973 2137 99 21 0 chr10 21778929 21779211 -123810077 + AluSx SINE Alu 2 289 -23 4699 288 112 22 chr10 21779211 21780188 -123809100 - L2 LINE L2 -1340 1973 634 729 313 30 13 chr10 21780188 21780418 -123808870 - L2 LINE L2 -539 2775 2542 941 255 132 78 chr10 21780419 21780621 -123808667 - L2 LINE L2 -2616 698 508 3590 162 82 1 chr10 21780621 21781289 -123807999 + MER72 LTR ERV1 1 722 0 941 255 132 78 chr10 21781289 21781678 -123807610 - L2 LINE L2 -2806 508 75 665 280 47 4 chr10 21782188 21782424 -123806864 - L2 LINE L2 -2197 1117 872 383 269 79 95 chr10 21783021 21783326 -123805962 - MER102b DNA MER1_type -4 337 38 772 251 35 0 chr10 21783622 21783825 -123805463 - LTR16A LTR ERVL -17 433 224 255 247 21 62 chr10 21783878 21783975 -123805313 - LTR16A1 LTR ERVL -364 93 1 2316 90 76 17 chr10 21784217 21784561 -123804727 - THE1B LTR MaLR 0 364 1 193 296 111 25 chr10 21786886 21786967 -123802321 - MIR3 SINE MIR -15 193 106 714 211 0 96 chr10 21789306 21789524 -123799764 - MER51C LTR ERV1 0 640 444 489 251 68 11 chr10 21790504 21790632 -123798656 - Charlie1 DNA MER1_type 0 2761 2617 2348 96 0 0 chr10 21790632 21790925 -123798363 - AluSq SINE Alu -20 293 1 489 251 68 11 chr10 21790925 21790987 -123798301 - Charlie1 DNA MER1_type -144 2617 2560 28 29 0 0 chr10 21790987 21791022 -123798266 + AT_rich Low_complexity Low_complexity 1 35 0 383 277 62 15 chr10 21791050 21791180 -123798108 - Charlie1 DNA MER1_type -2625 136 1 533 304 144 19 chr10 21792498 21792761 -123796527 + L2 LINE L2 222 517 -2797 281 294 18 0 chr10 21792868 21792977 -123796311 - L1ME LINE L1 -362 5759 5649 16014 96 6 2 chr10 21793153 21796253 -123793035 - L1PA7 LINE L1 -1 6153 3037 1758 68 4 0 chr10 21796553 21796801 -123792487 - L1PA7 LINE L1 -4046 2100 1852 561 207 136 20 chr10 21796891 21797089 -123792199 - L1ME2 LINE L1 -16 6148 5928 412 271 99 40 chr10 21797137 21797805 -123791483 - L1MCc LINE L1 -4853 2088 1228 2048 148 5 44 chr10 21798238 21798623 -123790665 - L1MC1 LINE L1 0 6333 5964 264 291 11 40 chr10 21799058 21799233 -123790055 - MER41B LTR ERV1 -208 427 258 670 224 7 7 chr10 21801356 21801508 -123787780 + MLT1A1 LTR MaLR 10 161 -204 907 188 29 14 chr10 21801547 21801754 -123787534 + MLT1A1 LTR MaLR 156 365 0 245 231 0 0 chr10 21801767 21801819 -123787469 + MER112 DNA MER1_type 209 260 0 227 175 18 0 chr10 21802287 21802344 -123786944 + GA-rich Low_complexity Low_complexity 2 59 0 1901 130 31 14 chr10 21803835 21804127 -123785161 - AluSq SINE Alu -3 310 14 2256 111 0 16 chr10 21804350 21804665 -123784623 - AluSx SINE Alu -2 310 1 2315 167 17 14 chr10 21805015 21805435 -123783853 + MSTB LTR MaLR 1 421 -5 1336 194 22 80 chr10 21805587 21805901 -123783387 + AluJb SINE Alu 1 296 -16 2140 98 14 11 chr10 21807239 21807526 -123781762 + AluSq SINE Alu 1 288 -25 200 175 25 0 chr10 21807954 21807994 -123781294 + L2 LINE L2 3273 3313 0 455 208 8 0 chr10 21808711 21808836 -123780452 + (TG)n Simple_repeat Simple_repeat 1 126 0 551 333 127 26 chr10 21808866 21809332 -123779956 - L2 LINE L2 -346 2968 2456 2022 128 122 31 chr10 21809569 21809961 -123779327 + MSTA LTR MaLR 1 428 0 2372 104 0 3 chr10 21810398 21810707 -123778581 + AluSq SINE Alu 1 308 -5 975 179 19 24 chr10 21811404 21811611 -123777677 + MLT1C LTR MaLR 2 207 -260 193 346 122 9 chr10 21813258 21813365 -123775923 - MIR3 SINE MIR -76 132 14 22 0 0 0 chr10 21813987 21814009 -123775279 + AT_rich Low_complexity Low_complexity 1 22 0 1803 24 0 0 chr10 21814690 21814902 -123774386 + L1PA4 LINE L1 5941 6152 -3 1200 249 83 8 chr10 21817105 21817491 -123771797 + L1ME1 LINE L1 5654 6068 -98 2160 171 5 7 chr10 21817771 21818175 -123771113 - MER57A LTR ERV1 0 403 1 1185 230 115 15 chr10 21818374 21818705 -123770583 - MLT1A1 LTR MaLR 0 365 2 29 28 0 0 chr10 21819300 21819336 -123769952 + AT_rich Low_complexity Low_complexity 1 36 0 1797 193 0 0 chr10 21819338 21819633 -123769655 + AluJb SINE Alu 4 298 -14 267 153 34 0 chr10 21820042 21820101 -123769187 - MLT1A1 LTR MaLR -15 350 290 988 47 0 0 chr10 21820101 21820230 -123769058 - L1P LINE L1 -1691 4455 4327 6207 53 1 0 chr10 21820230 21820998 -123768290 + L1PA5 LINE L1 5372 6141 -13 252 0 0 0 chr10 21821002 21821030 -123768258 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 1005 219 38 86 chr10 21821030 21821427 -123767861 - MLT1C LTR MaLR -56 411 34 1941 157 0 13 chr10 21821863 21822168 -123767120 - AluSx SINE Alu -11 301 1 376 254 78 56 chr10 21822201 21822343 -123766945 + MIR SINE MIR 110 254 -8 275 317 24 16 chr10 21822429 21822552 -123766736 - MIR3 SINE MIR 0 208 85 1932 123 6 63 chr10 21823029 21823347 -123765941 + AluSx SINE Alu 1 300 -12 1741 176 80 8 chr10 21823677 21824041 -123765247 + MLT1B LTR MaLR 1 390 0 2557 105 8 3 chr10 21824563 21824925 -123764363 + THE1B LTR MaLR 1 364 0 185 359 97 10 chr10 21824993 21825096 -123764192 - L2 LINE L2 -805 2509 2398 1332 182 13 33 chr10 21825180 21825482 -123763806 + L1MB7 LINE L1 5849 6144 -40 650 212 97 0 chr10 21826254 21826419 -123762869 + MER20 DNA MER1_type 39 219 0 24 32 0 0 chr10 21827508 21827539 -123761749 + AT_rich Low_complexity Low_complexity 1 31 0 287 389 25 13 chr10 21827976 21828133 -123761155 + L2 LINE L2 2735 2893 -421 2183 99 0 0 chr10 21828210 21828493 -123760795 + AluSx SINE Alu 14 296 -16 1672 172 7 21 chr10 21828518 21828803 -123760485 - AluJo SINE Alu -31 281 1 551 180 69 85 chr10 21831138 21831327 -123757961 - MER53 DNA DNA -2 187 2 2166 121 0 3 chr10 21833112 21833409 -123755879 + AluSc SINE Alu 1 296 -13 1309 237 45 28 chr10 21835990 21836153 -123753135 + L1ME1 LINE L1 5693 5852 -314 1718 123 0 0 chr10 21836153 21836389 -123752899 + AluSq SINE Alu 65 300 -13 1309 237 45 28 chr10 21836389 21836647 -123752641 + L1ME1 LINE L1 5852 6121 -45 953 244 137 14 chr10 21836664 21837088 -123752200 + L1ME1 LINE L1 5694 6184 0 253 322 122 0 chr10 21837158 21837273 -123752015 + L2 LINE L2 3136 3264 -8 410 229 16 49 chr10 21837316 21837438 -123751850 - MIR SINE MIR -30 232 115 1611 190 63 14 chr10 21838089 21838437 -123750851 - MLT1A1 LTR MaLR 0 365 1 359 331 78 13 chr10 21839092 21839246 -123750042 + MIR SINE MIR 13 176 -86 21 0 0 0 chr10 21839655 21839676 -123749612 + AT_rich Low_complexity Low_complexity 1 21 0 26 30 0 0 chr10 21839704 21839737 -123749551 + AT_rich Low_complexity Low_complexity 1 33 0 1832 211 67 4 chr10 21840722 21841262 -123748026 + MER114 LTR ERV 75 648 0 1135 234 56 36 chr10 21841267 21841900 -123747388 - L1MEc LINE L1 -3681 2534 1918 426 193 167 0 chr10 21841964 21842078 -123747210 - MER63 DNA MER1_type -302 760 2 470 302 68 0 chr10 21842174 21842439 -123746849 - L1MEc LINE L1 -5407 989 707 22 35 0 0 chr10 21843319 21843348 -123745940 + AT_rich Low_complexity Low_complexity 1 29 0 2185 137 0 0 chr10 21843375 21843682 -123745606 + AluSq SINE Alu 1 307 -6 3843 94 24 0 chr10 21845607 21846148 -123743140 - MER41A LTR ERV1 0 554 1 234 314 178 35 chr10 21846229 21846487 -123742801 + L3 LINE CR1 1257 1551 -26 2393 88 0 0 chr10 21847160 21847457 -123741831 + AluSg SINE Alu 3 299 -11 1980 133 41 49 chr10 21847852 21848219 -123741069 + THE1B LTR MaLR 1 364 0 323 256 15 12 chr10 21849681 21849763 -123739525 + MIR SINE MIR 40 123 -85 2101 128 3 0 chr10 21850516 21850813 -123738475 + AluSx SINE Alu 1 298 -14 28 0 0 0 chr10 21850818 21850846 -123738442 + AT_rich Low_complexity Low_complexity 1 28 0 1803 157 44 73 chr10 21851934 21852161 -123737127 - MER57A LTR ERV1 0 403 192 2136 121 0 25 chr10 21852161 21852476 -123736812 + AluSx SINE Alu 3 309 -3 1803 157 44 73 chr10 21852476 21852656 -123736632 - MER57A LTR ERV1 -211 192 8 997 159 18 36 chr10 21854999 21855219 -123734069 - MER4B LTR ERV1 -394 216 1 1402 206 0 65 chr10 21855856 21855989 -123733299 + AluJo SINE Alu 1 141 -171 239 0 32 0 chr10 21855989 21856020 -123733268 + (TTG)n Simple_repeat Simple_repeat 2 33 0 1983 138 3 3 chr10 21856022 21856304 -123732984 - AluSx SINE Alu -30 282 1 1402 206 0 65 chr10 21856304 21856488 -123732800 + AluJo SINE Alu 142 300 -12 1082 252 128 9 chr10 21856909 21857254 -123732034 - MLT1E LTR MaLR -2 591 206 360 0 0 0 chr10 21857696 21857736 -123731552 + (TAA)n Simple_repeat Simple_repeat 2 41 0 341 179 45 8 chr10 21857936 21858070 -123731218 + GA-rich Low_complexity Low_complexity 3 141 0 592 259 142 49 chr10 21858547 21859183 -123730105 - HAL1 LINE L1 -141 2366 1672 478 259 78 48 chr10 21859861 21859899 -123729389 + L1M4 LINE L1 2217 2252 -3894 2056 138 13 10 chr10 21859899 21860204 -123729084 + AluSx SINE Alu 1 306 -6 478 259 78 48 chr10 21860204 21860511 -123728777 + L1M4 LINE L1 2252 2590 -3556 1337 200 84 26 chr10 21860511 21860856 -123728432 - MLT1A1 LTR MaLR 0 365 1 478 259 78 48 chr10 21860856 21861097 -123728191 + L1M4 LINE L1 2590 2822 -3324 2162 135 0 0 chr10 21861726 21862029 -123727259 - AluSx SINE Alu -9 303 1 302 316 79 14 chr10 21862267 21862406 -123726882 - L1ME4a LINE L1 -27 6094 5947 25 51 0 0 chr10 21862592 21862631 -123726657 + AT_rich Low_complexity Low_complexity 1 39 0 1287 128 66 4 chr10 21862631 21862873 -123726415 - L1MA4 LINE L1 -2 6298 6042 204 97 0 0 chr10 21863747 21863778 -123725510 + (TCTCC)n Simple_repeat Simple_repeat 5 35 0 651 159 0 19 chr10 21863781 21863888 -123725400 - FLAM_A SINE Alu -34 108 4 296 206 14 0 chr10 21863937 21864010 -123725278 + L1MA10 LINE L1 6260 6333 -1 1888 208 44 13 chr10 21864012 21864540 -123724748 - L1M4c LINE L1 -3906 2478 1935 202 313 101 0 chr10 21865344 21865443 -123723845 + MIR SINE MIR 101 209 -53 251 182 15 76 chr10 21865680 21865746 -123723542 - MIR3 SINE MIR -8 200 139 1789 190 45 30 chr10 21866508 21866749 -123722539 + MLT2D LTR ERVL 1 252 -162 2052 110 0 44 chr10 21866749 21867066 -123722222 - AluSx SINE Alu -9 303 1 1789 190 45 30 chr10 21867066 21867224 -123722064 + MLT2D LTR ERVL 252 406 -8 389 286 9 9 chr10 21867972 21868077 -123721211 - MIR SINE MIR -67 141 37 23 33 0 0 chr10 21868219 21868249 -123721039 + AT_rich Low_complexity Low_complexity 1 30 0 2333 76 0 7 chr10 21868878 21869182 -123720106 + AluY SINE Alu 1 302 -9 5272 138 42 24 chr10 21869280 21870268 -123719020 - L1MA8 LINE L1 -2 6289 5285 2242 80 22 26 chr10 21871352 21871665 -123717623 - AluSx SINE Alu 0 312 1 22 35 0 0 chr10 21871906 21871935 -123717353 + AT_rich Low_complexity Low_complexity 1 29 0 1702 225 28 5 chr10 21873022 21873448 -123715840 + MER63B DNA MER1_type 1 436 0 612 269 107 5 chr10 21873456 21873653 -123715635 + MIR SINE MIR 46 262 0 2889 112 9 2 chr10 21873675 21874122 -123715166 + MER41B LTR ERV1 95 544 -91 1757 116 14 28 chr10 21874454 21874724 -123714564 + L1PA15 LINE L1 5886 6153 -12 1949 141 157 5 chr10 21874724 21875093 -123714195 - MSTA LTR MaLR 0 428 4 1757 116 14 28 chr10 21875093 21875106 -123714182 + L1PA15 LINE L1 6153 6165 0 2020 168 23 29 chr10 21875106 21875424 -123713864 + MSTB LTR MaLR 41 358 -68 1925 101 101 0 chr10 21875424 21875692 -123713596 - AluSc SINE Alu -12 297 3 2020 168 23 29 chr10 21875692 21875759 -123713529 + MSTB LTR MaLR 358 424 -2 561 270 66 21 chr10 21875905 21876146 -123713142 - MER112 DNA MER1_type -2 254 3 6940 66 0 14 chr10 21876248 21877576 -123711712 + L1PA8 LINE L1 4842 6162 -10 569 239 43 38 chr10 21878086 21878270 -123711018 - L1ME1 LINE L1 -20 6146 5962 28 0 0 0 chr10 21878276 21878304 -123710984 + AT_rich Low_complexity Low_complexity 1 28 0 1602 182 23 23 chr10 21879294 21879601 -123709687 - AluJo SINE Alu -5 307 1 1998 144 13 0 chr10 21879601 21879899 -123709389 - AluSx SINE Alu -10 302 1 206 143 29 0 chr10 21879937 21879972 -123709316 + (TATG)n Simple_repeat Simple_repeat 3 38 0 1920 141 4 0 chr10 21880482 21880758 -123708530 + AluSx SINE Alu 1 277 -35 422 0 0 36 chr10 21880790 21880845 -123708443 + (TAAA)n Simple_repeat Simple_repeat 2 54 0 1081 66 0 0 chr10 21880845 21880981 -123708307 + L1PA10 LINE L1 6032 6167 -1 296 252 78 0 chr10 21881294 21881397 -123707891 + MER117 DNA MER1_type 47 157 -40 1989 167 0 3 chr10 21881589 21881894 -123707394 - AluJb SINE Alu -6 306 3 1502 113 0 5 chr10 21882010 21882214 -123707074 - AluSc SINE Alu 0 309 107 21 0 0 0 chr10 21883191 21883212 -123706076 + AT_rich Low_complexity Low_complexity 1 21 0 350 275 98 79 chr10 21886867 21887285 -123702003 - L1MEc LINE L1 -4094 2302 1877 212 167 0 0 chr10 21887293 21887329 -123701959 + (TG)n Simple_repeat Simple_repeat 1 36 0 2246 115 0 34 chr10 21887517 21887840 -123701448 - AluSx SINE Alu 0 312 1 1958 154 0 13 chr10 21888150 21888461 -123700827 + AluJb SINE Alu 1 307 -5 1848 202 108 27 chr10 21888549 21889069 -123700219 - MER68 LTR ERV1 0 562 1 677 172 30 98 chr10 21889384 21889587 -123699701 - MER20 DNA MER1_type 0 219 31 240 299 27 61 chr10 21889681 21889828 -123699460 - MIR SINE MIR -54 208 67 636 295 98 9 chr10 21889872 21890096 -123699192 - MIR SINE MIR 0 262 19 2226 84 0 3 chr10 21892055 21892367 -123696921 - AluSx SINE Alu 0 311 1 415 294 32 105 chr10 21893902 21894273 -123695015 - L2 LINE L2 -14 3258 2915 2058 98 4 0 chr10 21896753 21897028 -123692260 - AluSg1 SINE Alu -33 276 1 2089 133 10 7 chr10 21897654 21897963 -123691325 + AluSx SINE Alu 1 310 -2 372 321 42 31 chr10 21898532 21898725 -123690563 - MIR SINE MIR -56 206 12 1547 162 29 42 chr10 21899964 21900273 -123689015 + AluJo SINE Alu 1 305 -7 6584 54 13 1 chr10 21900377 21901620 -123687668 - L1P2 LINE L1 -410 5744 4492 201 39 0 0 chr10 21901880 21901906 -123687382 + (TTG)n Simple_repeat Simple_repeat 2 27 0 796 168 0 0 chr10 21901920 21902051 -123687237 - FLAM_C SINE Alu 0 133 3 230 273 56 25 chr10 21902594 21902755 -123686533 + L1ME LINE L1 3681 3846 -2300 22 0 0 0 chr10 21902929 21902951 -123686337 + AT_rich Low_complexity Low_complexity 1 22 0 237 261 11 0 chr10 21902965 21903057 -123686231 + L1ME LINE L1 5337 5429 -2379 366 342 12 0 chr10 21903075 21903236 -123686052 + L1ME LINE L1 5582 5744 -426 1372 209 27 48 chr10 21903247 21903556 -123685732 + MLT1A1 LTR MaLR 1 302 -63 2121 148 0 3 chr10 21903556 21903866 -123685422 + AluJo SINE Alu 1 309 -3 1372 209 27 48 chr10 21903866 21903929 -123685359 + MLT1A1 LTR MaLR 302 365 0 1994 136 0 7 chr10 21904617 21904903 -123684385 + AluSx SINE Alu 1 284 -28 213 39 0 0 chr10 21904903 21904929 -123684359 + (CAAG)n Simple_repeat Simple_repeat 2 27 0 348 227 0 0 chr10 21905191 21905279 -123684009 + (TG)n Simple_repeat Simple_repeat 1 88 0 339 25 0 0 chr10 21906226 21906266 -123683022 + (TG)n Simple_repeat Simple_repeat 2 41 0 1280 231 105 43 chr10 21906268 21906688 -123682600 - MLT2B1 LTR ERVL -74 446 1 613 271 29 0 chr10 21906691 21906861 -123682427 + MER5B DNA MER1_type 4 178 0 350 360 29 29 chr10 21907333 21907472 -123681816 + L2 LINE L2 3134 3272 0 338 297 74 48 chr10 21907987 21908216 -123681072 + L2 LINE L2 3079 3313 0 4707 267 80 17 chr10 21908442 21910542 -123678746 + L1MEc LINE L1 175 2405 -3991 3426 222 44 38 chr10 21910535 21911526 -123677762 + L1M4 LINE L1 2 998 -5544 * 1024 203 0 16 chr10 21911538 21911725 -123677563 - AluJb SINE Alu -7 305 122 943 201 58 64 chr10 21911725 21912053 -123677235 + L1M4 LINE L1 1041 1366 -5176 761 284 150 18 chr10 21912070 21912457 -123676831 + MLT1G3 LTR MaLR 93 530 0 2289 108 0 0 chr10 21913804 21914101 -123675187 - AluSc SINE Alu -12 297 1 755 191 8 0 chr10 21915011 21915142 -123674146 + FLAM_A SINE Alu 1 132 -1 1694 144 3 75 chr10 21915249 21915568 -123673720 + AluSq SINE Alu 1 296 -17 771 321 116 11 chr10 21915687 21916135 -123673153 - LTR33 LTR ERVL -22 499 5 315 317 50 31 chr10 21917324 21917485 -123671803 + MIR3 SINE MIR 42 205 -3 1926 162 42 0 chr10 21917509 21917842 -123671446 + MER7A DNA MER2_type 1 345 -1 255 220 0 0 chr10 21918698 21918748 -123670540 + MIR SINE MIR 79 128 -134 1154 225 171 7 chr10 21918801 21919241 -123670047 - L1M4 LINE L1 -1253 4893 4382 3194 143 55 74 chr10 21919310 21920014 -123669274 - LTR8 LTR ERV1 0 691 1 204 365 32 32 chr10 21920191 21920317 -123668971 + L2 LINE L2 3168 3293 -20 229 345 23 11 chr10 21921252 21921339 -123667949 + MIR SINE MIR 41 128 -80 2294 114 22 13 chr10 21921707 21922078 -123667210 + THE1B LTR MaLR 1 364 0 195 381 39 35 chr10 21922393 21922624 -123666664 - L2 LINE L2 -213 3059 2828 2223 142 19 39 chr10 21922653 21922671 -123666617 - MER57A LTR ERV1 -1 402 385 2022 141 3 3 chr10 21922671 21922976 -123666312 + AluSx SINE Alu 1 305 -7 2223 142 19 39 chr10 21922976 21923367 -123665921 - MER57A LTR ERV1 -18 385 1 502 152 50 0 chr10 21925806 21925905 -123663383 + MER5A DNA MER1_type 9 112 -77 231 339 150 0 chr10 21926613 21926740 -123662548 - L3b LINE CR1 -270 1313 1168 211 237 105 26 chr10 21926741 21926817 -123662471 - MIR SINE MIR 0 262 181 2014 157 0 23 chr10 21926955 21927300 -123661988 + MER1B DNA MER1_type 1 337 0 574 319 47 14 chr10 21927989 21928202 -123661086 - MIR SINE MIR -38 224 5 368 278 35 77 chr10 21928887 21929056 -123660232 - MLT1J LTR MaLR -92 419 258 443 334 13 5 chr10 21929256 21929441 -123659847 - MIR3 SINE MIR -8 200 15 359 247 54 32 chr10 21930091 21930184 -123659104 - MIR SINE MIR -134 128 34 6367 163 38 12 chr10 21930427 21931462 -123657826 + L1MA8 LINE L1 3256 4335 -1811 1806 169 3 7 chr10 21931462 21931763 -123657525 + AluJb SINE Alu 1 300 -12 6367 163 38 12 chr10 21931763 21932065 -123657223 + L1MA8 LINE L1 4335 4628 -1518 249 109 0 0 chr10 21932094 21932140 -123657148 + (TTTA)n Simple_repeat Simple_repeat 1 46 0 40900 33 22 1 chr10 21932141 21938154 -123651134 - L1PA2 LINE L1 -13 6142 2 3783 163 75 27 chr10 21938202 21939781 -123649507 + L1MA8 LINE L1 4632 6279 -12 196 226 161 58 chr10 21939789 21939944 -123649344 - L2 LINE L2 -13 3300 3130 317 361 19 0 chr10 21941081 21941189 -123648099 - L3 LINE CR1 -371 1206 1097 716 306 65 25 chr10 21941478 21941834 -123647454 - MLT1J LTR MaLR -141 370 1 315 303 37 0 chr10 21941838 21941947 -123647341 - MIR SINE MIR -87 175 63 633 312 163 35 chr10 21942116 21942738 -123646550 + L2 LINE L2 2568 3261 -52 2155 117 0 3 chr10 21942791 21943098 -123646190 - AluSc SINE Alu -3 306 1 782 263 75 94 chr10 21943152 21943608 -123645680 - L2 LINE L2 0 3313 2867 217 337 61 10 chr10 21943606 21943704 -123645584 - L3 LINE CR1 -797 780 678 * 3359 233 78 28 chr10 21943799 21945868 -123643420 + L1MD1 LINE L1 3547 5887 -355 819 217 19 0 chr10 21945868 21946029 -123643259 + FRAM SINE Alu 1 164 -2 3359 233 78 28 chr10 21946029 21946404 -123642884 + L1MD1 LINE L1 5887 6242 0 405 261 78 9 chr10 21946766 21946996 -123642292 - L1M4 LINE L1 -1504 4642 4397 776 360 61 32 chr10 21947341 21947866 -123641422 - L3 LINE CR1 -1031 546 7 236 260 40 110 chr10 21949973 21950073 -123639215 - L2 LINE L2 -19 3294 3202 407 264 50 43 chr10 21951034 21951174 -123638114 + MIR3 SINE MIR 3 143 -65 1693 158 7 7 chr10 21951274 21951553 -123637735 - AluSx SINE Alu -5 307 29 2398 154 32 11 chr10 21951587 21952023 -123637265 + MER65A LTR ERV1 1 445 0 1770 155 47 6 chr10 21952024 21952341 -123636947 + MLT1B LTR MaLR 1 330 -60 2147 194 14 14 chr10 21952480 21952902 -123636386 + MSTB LTR MaLR 1 422 -4 569 264 0 0 chr10 21953034 21953163 -123636125 + L1ME LINE L1 5488 5616 -505 386 265 102 20 chr10 21953262 21953458 -123635830 + L1ME LINE L1 5500 5711 -410 1972 94 28 0 chr10 21953485 21953771 -123635517 - L1PB1 LINE L1 -2 6149 5856 1905 151 3 16 chr10 21954081 21954392 -123634896 + AluJo SINE Alu 1 307 -5 197 313 0 16 chr10 21957586 21957650 -123631638 + L2 LINE L2 3210 3272 0 1408 189 91 8 chr10 21958177 21958442 -123630846 + AluJo SINE Alu 1 287 -25 1916 128 34 52 chr10 21959634 21960016 -123629272 - THE1C LTR MaLR 0 375 1 206 406 28 0 chr10 21967112 21967218 -123622070 + L3 LINE CR1 1450 1558 -19 231 242 16 0 chr10 21969396 21969458 -123619830 + MIR SINE MIR 188 250 -12 21 0 0 0 chr10 21969745 21969766 -123619522 + AT_rich Low_complexity Low_complexity 1 21 0 1520 187 21 21 chr10 21970028 21970312 -123618976 + AluJo SINE Alu 2 285 -27 285 190 0 25 chr10 21970315 21970394 -123618894 - L1MC4 LINE L1 -1342 6700 6624 229 156 0 0 chr10 21970397 21970442 -123618846 - LTR66 LTR ERVL -172 438 394 2170 103 10 3 chr10 21970792 21971092 -123618196 + AluSx SINE Alu 11 312 0 1561 199 34 0 chr10 21971854 21972150 -123617138 - AluJo SINE Alu -1 311 6 224 294 98 29 chr10 21972346 21972448 -123616840 - MIR SINE MIR -44 218 110 273 119 0 0 chr10 21972585 21972627 -123616661 + (A)n Simple_repeat Simple_repeat 1 42 0 2138 119 7 10 chr10 21972981 21973284 -123616004 + AluSq SINE Alu 1 302 -11 1961 159 0 6 chr10 21974003 21974317 -123614971 - AluJb SINE Alu 0 312 1 376 172 75 0 chr10 21974961 21975054 -123614234 - L1MB4 LINE L1 -3 6177 6078 300 338 90 8 chr10 21975379 21975512 -123613776 - MIR SINE MIR -115 147 4 182 114 0 29 chr10 21976008 21976043 -123613245 + (TG)n Simple_repeat Simple_repeat 2 35 0 2164 102 16 16 chr10 21976543 21976856 -123612432 + AluSq SINE Alu 1 313 0 1432 184 10 30 chr10 21978284 21978588 -123610700 + AluJo SINE Alu 6 303 -9 1874 152 0 0 chr10 21979617 21979900 -123609388 - AluSx SINE Alu -12 300 18 3014 202 39 44 chr10 21980277 21980386 -123608902 - L1MA9 LINE L1 -30 6282 6174 225 0 0 0 chr10 21980386 21980411 -123608877 + (TG)n Simple_repeat Simple_repeat 1 25 0 3014 202 39 44 chr10 21980411 21981074 -123608214 - L1MA9 LINE L1 -138 6174 5514 1908 146 54 0 chr10 21981664 21981958 -123607330 - AluSx SINE Alu -2 310 1 243 368 140 0 chr10 21982029 21982143 -123607145 + L2 LINE L2 3178 3307 -6 192 343 48 19 chr10 21983399 21983504 -123605784 - MIR SINE MIR -71 137 30 1563 121 12 0 chr10 21983613 21983862 -123605426 + L1MA5A LINE L1 6040 6291 -6 234 0 0 0 chr10 21984274 21984300 -123604988 + (TA)n Simple_repeat Simple_repeat 2 27 0 34 24 0 0 chr10 21984419 21984460 -123604828 + AT_rich Low_complexity Low_complexity 1 41 0 569 290 159 12 chr10 21984498 21984750 -123604538 - L2 LINE L2 -1 3312 3024 1489 289 51 46 chr10 21985065 21985769 -123603519 - L2 LINE L2 -321 2992 2287 2164 128 0 0 chr10 21986032 21986328 -123602960 + AluSx SINE Alu 1 296 -16 410 294 25 103 chr10 21986883 21987243 -123602045 + L2 LINE L2 2941 3272 0 1780 154 11 3 chr10 21987505 21987791 -123601497 + AluSx SINE Alu 1 288 -24 23 0 0 0 chr10 21988520 21988543 -123600745 + AT_rich Low_complexity Low_complexity 1 23 0 693 189 172 18 chr10 21991285 21991454 -123597834 - MIR SINE MIR -5 257 63 191 254 0 36 chr10 21991797 21991852 -123597436 - L2 LINE L2 -505 2809 2757 1463 49 6 0 chr10 21992783 21992966 -123596322 - L1PA5 LINE L1 0 6154 5971 33 25 0 0 chr10 21993625 21993665 -123595623 + AT_rich Low_complexity Low_complexity 1 40 0 26 30 0 0 chr10 21993708 21993741 -123595547 + AT_rich Low_complexity Low_complexity 1 33 0 492 195 47 8 chr10 21993902 21994030 -123595258 + L1MB7 LINE L1 6052 6184 0 1300 201 42 50 chr10 21994778 21995061 -123594227 + AluJo SINE Alu 4 284 -18 327 49 0 0 chr10 21995061 21995102 -123594186 + (CA)n Simple_repeat Simple_repeat 2 42 0 1850 168 3 0 chr10 21996237 21996529 -123592759 - AluJb SINE Alu -19 293 1 1813 160 45 0 chr10 21997561 21997848 -123591440 + AluSx SINE Alu 3 302 -10 234 230 163 96 chr10 21998730 21998908 -123590380 + MIR SINE MIR 52 241 -21 293 375 50 0 chr10 21999121 21999241 -123590047 + L2 LINE L2 3146 3271 -1 1789 112 35 14 chr10 21999529 21999815 -123589473 - L1PA13 LINE L1 -13 6150 5859 180 0 0 0 chr10 22000176 22000196 -123589092 + (TTG)n Simple_repeat Simple_repeat 2 21 0 952 162 0 0 chr10 22000199 22000347 -123588941 - AluJb SINE Alu -25 287 140 24 0 0 0 chr10 22000525 22000549 -123588739 + AT_rich Low_complexity Low_complexity 1 24 0 2178 133 3 0 chr10 22001005 22001314 -123587974 + AluSx SINE Alu 1 310 -2 249 341 59 30 chr10 22001754 22001889 -123587399 - MIR3 SINE MIR -62 146 8 406 233 53 48 chr10 22001904 22002110 -123587178 + MER113 DNA MER1_type? 6 212 -309 226 225 141 14 chr10 22002527 22002598 -123586690 + MIR SINE MIR 182 261 -1 265 255 0 11 chr10 22002789 22002803 -123586485 + (TA)n Simple_repeat Simple_repeat 1 14 -79 192 97 0 0 chr10 22002803 22002834 -123586454 + (TCTA)n Simple_repeat Simple_repeat 4 34 0 265 255 0 11 chr10 22002834 22002913 -123586375 + (TA)n Simple_repeat Simple_repeat 14 93 0 353 182 13 57 chr10 22003024 22003183 -123586105 + (TA)n Simple_repeat Simple_repeat 1 152 0 1125 157 25 5 chr10 22003250 22003448 -123585840 - L1PB4 LINE L1 -1 6155 5954 2041 120 10 33 chr10 22005841 22006141 -123583147 + AluSx SINE Alu 6 298 -14 3349 73 4 0 chr10 22008098 22008552 -123580736 + L1PA13 LINE L1 5707 6162 -1 249 139 0 0 chr10 22009151 22009194 -123580094 + (GGGA)n Simple_repeat Simple_repeat 3 45 0 192 135 0 0 chr10 22009227 22009264 -123580024 + (GA)n Simple_repeat Simple_repeat 2 38 0 624 296 188 0 chr10 22009458 22009671 -123579617 - MIR SINE MIR -7 255 3 3380 18 0 0 chr10 22009673 22010058 -123579230 + L1PA3 LINE L1 5768 6152 -3 809 104 0 37 chr10 22011263 22011397 -123577891 + FRAM SINE Alu 46 174 -2 230 271 79 57 chr10 22012808 22012948 -123576340 + MLT1K LTR MaLR 441 583 -5 322 143 0 32 chr10 22013580 22013643 -123575645 - MLT1F1 LTR MaLR 0 567 507 265 220 0 0 chr10 22013702 22013752 -123575536 - MLT1I LTR MaLR -266 143 94 254 327 29 29 chr10 22014024 22014128 -123575160 - L2 LINE L2 -541 2773 2670 840 65 0 0 chr10 22014136 22014243 -123575045 + AluY SINE Alu 201 307 -4 272 271 336 11 chr10 22014251 22014513 -123574775 - L2 LINE L2 -652 2662 2316 245 163 0 0 chr10 22014916 22014959 -123574329 + MLT1L LTR MaLR 145 187 -428 313 206 137 0 chr10 22016425 22016498 -123572790 + MIR SINE MIR 71 153 -109 14911 127 28 11 chr10 22016499 22016692 -123572596 + Tigger1 DNA MER2_type 1 189 -2229 2191 103 7 0 chr10 22016692 22016984 -123572304 - AluSx SINE Alu -18 294 1 14911 127 28 11 chr10 22016984 22017009 -123572279 + Tigger1 DNA MER2_type 189 212 -2206 2212 143 6 3 chr10 22017009 22017351 -123571937 + MER61A LTR ERV1 1 343 0 14911 127 28 11 chr10 22017351 22019508 -123569780 + Tigger1 DNA MER2_type 212 2418 0 751 315 94 26 chr10 22020162 22020546 -123568742 + MLT1K LTR MaLR 167 576 -12 243 146 0 0 chr10 22020548 22020589 -123568699 + (CAT)n Simple_repeat Simple_repeat 1 41 0 249 108 0 0 chr10 22022072 22022109 -123567179 + (ATG)n Simple_repeat Simple_repeat 1 37 0 517 246 152 16 chr10 22022111 22022302 -123566986 - MLT1K LTR MaLR -12 576 360 210 370 9 9 chr10 22022700 22022808 -123566480 + MIR SINE MIR 37 144 -64 21 36 0 0 chr10 22023030 22023058 -123566230 + AT_rich Low_complexity Low_complexity 1 28 0 1914 169 54 3 chr10 22023069 22023460 -123565828 - L1MA7 LINE L1 -12 6279 5869 1537 245 33 6 chr10 22023467 22023830 -123565458 + MLT1A2 LTR MaLR 2 374 0 1737 148 62 3 chr10 22024150 22024474 -123564814 - L1MA5 LINE L1 0 6300 5958 224 165 68 29 chr10 22024786 22024889 -123564399 + (TA)n Simple_repeat Simple_repeat 2 108 0 21 0 0 0 chr10 22027624 22027645 -123561643 + AT_rich Low_complexity Low_complexity 1 21 0 1674 95 4 4 chr10 22028237 22028480 -123560808 + MER75B DNA T2_type 1 243 0 2026 144 6 54 chr10 22028914 22029268 -123560020 + MER1B DNA MER1_type 1 337 0 1824 175 25 28 chr10 22029834 22030229 -123559059 + MSTD LTR MaLR 3 396 0 358 330 0 0 chr10 22030351 22030451 -123558837 + MIR SINE MIR 157 256 -6 386 289 56 41 chr10 22030584 22030781 -123558507 - MIR3 SINE MIR -1 207 8 540 207 36 21 chr10 22031513 22031653 -123557635 + Charlie2a DNA MER1_type 913 1054 -1808 1153 242 114 31 chr10 22031687 22031955 -123557333 + Charlie2a DNA MER1_type 2235 2479 -383 2211 90 0 37 chr10 22031955 22032255 -123557033 + AluSg SINE Alu 1 289 -21 1153 242 114 31 chr10 22032255 22032540 -123556748 + Charlie2a DNA MER1_type 2479 2834 -28 180 217 0 0 chr10 22033497 22033543 -123555745 + A-rich Low_complexity Low_complexity 4 49 0 1529 75 0 0 chr10 22033861 22034062 -123555226 + L1MA3 LINE L1 5735 5935 -370 552 178 0 0 chr10 22034062 22034152 -123555136 + AluJo SINE Alu 96 185 -127 1833 176 11 11 chr10 22034152 22034504 -123554784 + L1MA3 LINE L1 5954 6305 0 22 0 0 0 chr10 22034508 22034530 -123554758 + AT_rich Low_complexity Low_complexity 1 22 0 1947 162 3 0 chr10 22035023 22035326 -123553962 - AluJo SINE Alu -8 304 1 2081 93 7 27 chr10 22035404 22035704 -123553584 + AluSc SINE Alu 1 294 -15 183 42 0 0 chr10 22035972 22035996 -123553292 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 40 0 0 0 chr10 22037256 22037296 -123551992 + AT_rich Low_complexity Low_complexity 1 40 0 1817 142 53 0 chr10 22037303 22037584 -123551704 - AluSq SINE Alu -17 296 1 187 323 46 0 chr10 22037851 22037916 -123551372 + L2 LINE L2 3186 3253 -19 728 260 113 17 chr10 22039245 22039476 -123549812 - MIR SINE MIR -2 260 8 190 226 179 24 chr10 22039783 22039867 -123549421 - MIR SINE MIR -14 248 152 23 33 0 0 chr10 22040000 22040030 -123549258 + AT_rich Low_complexity Low_complexity 1 30 0 213 39 0 0 chr10 22041023 22041049 -123548239 + (A)n Simple_repeat Simple_repeat 1 26 0 2129 87 0 7 chr10 22041663 22041940 -123547348 - AluY SINE Alu -36 275 1 1927 197 20 0 chr10 22042297 22042648 -123546640 - MER47A DNA MER2_type -7 359 2 22 0 0 0 chr10 22043324 22043346 -123545942 + AT_rich Low_complexity Low_complexity 1 22 0 638 87 0 48 chr10 22043346 22043449 -123545839 - L1MA2 LINE L1 0 6304 6207 215 327 183 27 chr10 22044162 22044425 -123544863 - L2 LINE L2 -69 3244 2941 1013 250 9 22 chr10 22045739 22045967 -123543321 - MIR SINE MIR -26 236 12 1047 175 0 5 chr10 22046673 22046867 -123542421 + L1MB3 LINE L1 5990 6182 -1 290 291 23 46 chr10 22047197 22047372 -123541916 - L1ME LINE L1 -696 5466 5296 21 0 0 0 chr10 22047476 22047497 -123541791 + AT_rich Low_complexity Low_complexity 1 21 0 672 323 30 31 chr10 22048079 22048682 -123540606 - L1ME LINE L1 -1089 5057 4456 279 0 0 0 chr10 22048772 22048803 -123540485 + (TG)n Simple_repeat Simple_repeat 2 32 0 2210 116 3 0 chr10 22050506 22050807 -123538481 + AluSx SINE Alu 1 302 -10 260 303 28 49 chr10 22051695 22051837 -123537451 - MER5A DNA MER1_type -28 161 23 3987 89 11 2 chr10 22052991 22053540 -123535748 + MER41A LTR ERV1 1 554 0 212 167 21 0 chr10 22053925 22053973 -123535315 + GA-rich Low_complexity Low_complexity 3 51 0 328 255 27 34 chr10 22054205 22054354 -123534934 - L1M4 LINE L1 -1501 4645 4498 721 294 112 42 chr10 22054709 22055181 -123534107 + MLT1K LTR MaLR 77 581 -7 2035 152 3 3 chr10 22055197 22055500 -123533788 - AluSx SINE Alu -9 303 1 425 299 16 16 chr10 22055832 22055959 -123533329 + MLT2E LTR ERVL 30 156 -472 297 0 0 0 chr10 22056180 22056213 -123533075 + (CAGC)n Simple_repeat Simple_repeat 2 34 0 22 35 0 0 chr10 22056544 22056573 -123532715 + AT_rich Low_complexity Low_complexity 1 29 0 580 293 47 16 chr10 22057643 22057834 -123531454 - MIR SINE MIR -38 224 28 2988 167 14 61 chr10 22057852 22058494 -123530794 + LTR9 LTR ERV1 1 612 0 310 266 203 16 chr10 22059689 22059817 -123529471 + MIR SINE MIR 110 261 -1 2145 120 0 0 chr10 22060542 22060841 -123528447 + AluSg1 SINE Alu 1 299 -10 185 309 49 25 chr10 22061007 22061088 -123528200 + L2 LINE L2 3174 3256 -16 326 218 128 0 chr10 22062151 22062229 -123527059 + L2 LINE L2 3185 3272 0 957 198 202 4 chr10 22062393 22062645 -123526643 + AluJo SINE Alu 1 302 0 499 207 35 12 chr10 22062649 22062818 -123526470 + GA-rich Low_complexity Low_complexity 2 174 0 26 0 0 0 chr10 22062898 22062924 -123526364 + AT_rich Low_complexity Low_complexity 1 26 0 331 279 125 0 chr10 22062942 22063046 -123526242 + L2 LINE L2 3156 3272 0 353 331 211 20 chr10 22063257 22063858 -123525430 - L3 LINE CR1 -102 1475 760 813 152 0 0 chr10 22064713 22064838 -123524450 - FLAM_C SINE Alu -8 125 1 297 278 104 26 chr10 22065227 22065342 -123523946 - L3 LINE CR1 -68 1509 1386 1003 50 14 50 chr10 22066510 22066651 -123522637 + L1PA10 LINE L1 6025 6160 -8 2114 112 0 20 chr10 22066706 22067001 -123522287 + AluSx SINE Alu 5 293 -19 829 233 60 23 chr10 22067063 22067278 -123522010 + MIR SINE MIR 3 225 -37 403 306 9 0 chr10 22067374 22067482 -123521806 - L2 LINE L2 -4 3309 3201 1797 180 7 0 chr10 22067873 22068178 -123521110 - AluJb SINE Alu -5 307 1 230 139 0 23 chr10 22071421 22071464 -123517824 - MER94 DNA DNA -92 42 1 372 209 110 68 chr10 22072844 22073035 -123516253 + MLT1J LTR MaLR 313 511 0 259 295 6 90 chr10 22074468 22074624 -123514664 + L3 LINE CR1 1029 1171 -406 1657 188 3 10 chr10 22074655 22075002 -123514286 + AluJo SINE Alu 7 351 0 2345 63 0 47 chr10 22075094 22075412 -123513876 + AluY SINE Alu 1 303 -8 354 283 15 4 chr10 22075858 22075985 -123513303 + MIR SINE MIR 43 170 -63 180 111 0 0 chr10 22076035 22076062 -123513226 + (TTG)n Simple_repeat Simple_repeat 3 29 0 369 261 292 5 chr10 22076299 22076494 -123512794 - MIR SINE MIR 0 262 12 327 49 0 0 chr10 22076938 22076979 -123512309 + (TA)n Simple_repeat Simple_repeat 1 41 0 323 298 101 38 chr10 22077204 22077362 -123511926 + MIR3 SINE MIR 30 197 -11 216 255 0 0 chr10 22077590 22077641 -123511647 + CT-rich Low_complexity Low_complexity 3 53 0 28 0 0 0 chr10 22077675 22077703 -123511585 + AT_rich Low_complexity Low_complexity 1 28 0 416 261 7 43 chr10 22079056 22079194 -123510094 - MER103 DNA DNA -11 155 23 207 114 0 0 chr10 22079211 22079246 -123510042 + (CTAAT)n Simple_repeat Simple_repeat 4 38 0 288 329 74 20 chr10 22080007 22080156 -123509132 - MIR3 SINE MIR -2 206 50 325 224 132 0 chr10 22080170 22080246 -123509042 - L2 LINE L2 -1 3271 3186 180 325 145 0 chr10 22080725 22080808 -123508480 + MIR SINE MIR 38 132 -130 2181 79 3 51 chr10 22080857 22081003 -123508285 + AluSg SINE Alu 1 126 -184 2016 110 3 67 chr10 22081003 22081331 -123507957 + AluSx SINE Alu 1 307 -5 2181 79 3 51 chr10 22081331 22081499 -123507789 + AluSg SINE Alu 126 300 -10 28 29 0 0 chr10 22081981 22082016 -123507272 + AT_rich Low_complexity Low_complexity 1 35 0 2421 60 0 13 chr10 22082583 22082881 -123506407 + AluY SINE Alu 1 294 -17 445 211 73 9 chr10 22083406 22083515 -123505773 + LTR37A LTR ERV1 52 167 -259 901 140 13 20 chr10 22083518 22083668 -123505620 - MER44D DNA MER2_type -1 604 456 4890 131 21 9 chr10 22083668 22084480 -123504808 + L1PB3 LINE L1 5331 6152 -2 827 153 131 11 chr10 22084495 22084671 -123504617 - MER44D DNA MER2_type -142 467 1 713 199 75 0 chr10 22084721 22084907 -123504381 + LTR37A LTR ERV1 225 424 -2 251 282 0 24 chr10 22086228 22086313 -123502975 + (CATA)n Simple_repeat Simple_repeat 1 83 0 207 263 42 111 chr10 22086519 22086709 -123502579 + MIR SINE MIR 20 196 -66 441 291 61 27 chr10 22086858 22087006 -123502282 - L3b LINE CR1 -16 1567 1415 1944 158 7 0 chr10 22087433 22087743 -123501545 - AluJb SINE Alu 0 312 1 2201 100 37 7 chr10 22087773 22088073 -123501215 + AluSc SINE Alu 1 309 0 627 226 226 0 chr10 22088484 22088661 -123500627 + MER20 DNA MER1_type 3 219 0 225 0 0 0 chr10 22088790 22088815 -123500473 + (A)n Simple_repeat Simple_repeat 1 25 0 232 290 134 46 chr10 22091391 22091629 -123497659 - L2 LINE L2 -741 2573 2315 22 35 0 0 chr10 22091653 22091682 -123497606 + AT_rich Low_complexity Low_complexity 1 29 0 390 256 72 8 chr10 22092073 22092198 -123497090 + MIR SINE MIR 4 136 -126 1138 167 167 26 chr10 22092286 22092628 -123496660 - Charlie5 DNA MER1_type 0 2623 2234 521 226 0 0 chr10 22092636 22092738 -123496550 - Charlie5 DNA MER1_type -2506 106 5 747 254 52 86 chr10 22092971 22093357 -123495931 + L2 LINE L2 1463 1835 -1479 1220 105 3 6 chr10 22093430 22093627 -123495661 + L1PB4 LINE L1 5581 5780 -376 183 42 0 0 chr10 22093631 22093655 -123495633 + (TA)n Simple_repeat Simple_repeat 2 25 0 2131 118 34 55 chr10 22093924 22094305 -123494983 + L1PB4 LINE L1 5782 6154 -2 1304 307 130 30 chr10 22094318 22095024 -123494264 + L2 LINE L2 2118 2894 -420 427 326 23 19 chr10 22096328 22096543 -123492745 + L2 LINE L2 2381 2596 -718 2926 63 0 11 chr10 22096587 22096967 -123492321 + L1PA8 LINE L1 5784 6159 -13 2193 119 0 13 chr10 22097828 22098131 -123491157 + AluSx SINE Alu 1 299 -13 725 306 65 32 chr10 22098753 22099184 -123490104 + MLT1J2 LTR MaLR 6 450 0 323 310 62 16 chr10 22099382 22099511 -123489777 - L2 LINE L2 -1 3271 3137 267 269 103 0 chr10 22100579 22100657 -123488631 - MIR SINE MIR -73 189 104 41242 46 2 1 chr10 22101830 22107978 -123481310 + L1PA4 LINE L1 1 6155 0 38 18 0 18 chr10 22108470 22108492 -123480796 + AT_rich Low_complexity Low_complexity 1 22 -33 2044 126 0 3 chr10 22108492 22108794 -123480494 + AluSq SINE Alu 1 301 -12 38 18 0 18 chr10 22108794 22108827 -123480461 + AT_rich Low_complexity Low_complexity 22 55 0 215 286 25 84 chr10 22109567 22109686 -123479602 + L2 LINE L2 2979 3090 -182 489 305 84 28 chr10 22110202 22110437 -123478851 + MIR SINE MIR 14 261 -1 1508 162 0 12 chr10 22110826 22111067 -123478221 - AluSg/x SINE Alu -1 311 74 324 0 0 0 chr10 22112057 22112093 -123477195 + (CA)n Simple_repeat Simple_repeat 1 36 0 802 125 307 6 chr10 22112298 22112474 -123476814 + MER30 DNA MER1_type 1 229 -1 512 55 0 0 chr10 22113476 22113549 -123475739 - L1P LINE L1 -1950 4196 4124 2242 82 0 7 chr10 22113549 22113850 -123475438 + L1PA8 LINE L1 5868 6168 -4 296 295 108 29 chr10 22114504 22114643 -123474645 + L2 LINE L2 3121 3270 -2 794 168 0 29 chr10 22115363 22115500 -123473788 + FLAM_C SINE Alu 1 133 0 2210 127 0 0 chr10 22116530 22116838 -123472450 + AluSx SINE Alu 1 308 -4 2241 136 0 0 chr10 22117002 22117343 -123471945 + AluSx SINE Alu 5 345 0 1343 171 65 85 chr10 22117476 22117874 -123471414 + MLT1B LTR MaLR 1 390 0 198 0 0 0 chr10 22117882 22117904 -123471384 + (T)n Simple_repeat Simple_repeat 1 22 0 275 363 10 0 chr10 22118222 22118324 -123470964 - L2 LINE L2 0 3272 3170 219 69 0 0 chr10 22118401 22118430 -123470858 + (A)n Simple_repeat Simple_repeat 1 29 0 180 284 86 12 chr10 22118723 22118804 -123470484 - L2 LINE L2 -45 3268 3182 1847 108 62 56 chr10 22118856 22119197 -123470091 - MER61A LTR ERV1 0 343 1 318 336 48 73 chr10 22119866 22120196 -123469092 - L2 LINE L2 -413 2901 2580 337 234 18 0 chr10 22125009 22125120 -123464168 + (TA)n Simple_repeat Simple_repeat 2 114 0 501 262 93 46 chr10 22126278 22126515 -123462773 + MIR SINE MIR 14 261 -1 396 0 0 0 chr10 22127379 22127423 -123461865 + (CA)n Simple_repeat Simple_repeat 2 45 0 748 167 0 36 chr10 22127935 22128073 -123461215 - FLAM_C SINE Alu 0 133 1 2045 137 105 3 chr10 22128682 22129062 -123460226 - MSTB1 LTR MaLR -13 419 1 405 294 69 0 chr10 22129121 22129281 -123460007 + MLT1K LTR MaLR 354 524 -64 1037 277 95 25 chr10 22129486 22130129 -123459159 - L2 LINE L2 -1 3312 2628 358 239 194 0 chr10 22131565 22131699 -123457589 + L1ME2 LINE L1 5725 5884 -280 2230 112 0 0 chr10 22131721 22132016 -123457272 + AluSx SINE Alu 1 295 -17 1652 184 0 20 chr10 22132598 22132891 -123456397 + AluJo SINE Alu 1 287 -25 30 59 0 0 chr10 22133649 22133700 -123455588 + AT_rich Low_complexity Low_complexity 1 51 0 24 32 0 0 chr10 22133843 22133874 -123455414 + AT_rich Low_complexity Low_complexity 1 31 0 2198 138 3 0 chr10 22133909 22134220 -123455068 - AluSx SINE Alu 0 312 1 724 279 90 9 chr10 22134284 22134506 -123454782 + MIR SINE MIR 3 242 -20 1934 135 10 43 chr10 22134732 22135036 -123454252 + AluJb SINE Alu 1 294 -18 24 32 0 0 chr10 22135758 22135789 -123453499 + AT_rich Low_complexity Low_complexity 1 31 0 1421 12 0 0 chr10 22135823 22135985 -123453303 - L1PA2 LINE L1 -2 6153 5992 2470 73 0 0 chr10 22135988 22136288 -123453000 - AluY SINE Alu -11 300 1 2349 93 0 19 chr10 22136838 22137150 -123452138 + AluSc SINE Alu 1 306 -3 269 333 27 9 chr10 22137518 22137617 -123451671 - MIR SINE MIR -13 249 146 1627 189 3 20 chr10 22137617 22137923 -123451365 - AluJo SINE Alu -9 303 3 269 333 27 9 chr10 22137923 22137934 -123451354 - MIR SINE MIR -116 146 137 333 267 22 74 chr10 22138438 22138573 -123450715 - MIR SINE MIR -130 132 5 1782 187 26 10 chr10 22138619 22138924 -123450364 - AluJb SINE Alu -2 310 1 23 33 0 0 chr10 22138932 22138962 -123450326 + AT_rich Low_complexity Low_complexity 1 30 0 2159 106 13 23 chr10 22140428 22140730 -123448558 + AluSx SINE Alu 1 299 -13 3485 142 10 3 chr10 22140730 22141315 -123447973 + L1PA16 LINE L1 5578 6166 0 180 0 0 0 chr10 22141938 22141958 -123447330 + (GGA)n Simple_repeat Simple_repeat 3 22 0 1787 167 14 7 chr10 22142851 22143145 -123446143 + AluJo SINE Alu 1 296 -16 784 143 0 0 chr10 22143514 22143633 -123445655 + FLAM_C SINE Alu 3 121 -22 1317 203 68 15 chr10 22144101 22144367 -123444921 - AluJo SINE Alu -30 282 3 735 169 0 0 chr10 22145348 22145466 -123443822 - FLAM_C SINE Alu -15 118 1 633 280 134 22 chr10 22145954 22146358 -123442930 + MLT1K LTR MaLR 140 588 0 210 397 0 13 chr10 22147534 22147612 -123441676 + MIR3 SINE MIR 124 200 -8 3502 135 9 8 chr10 22149094 22149619 -123439669 + MER1A DNA MER1_type 1 526 -1 24 32 0 0 chr10 22150043 22150074 -123439214 + AT_rich Low_complexity Low_complexity 1 31 0 406 307 270 10 chr10 22151604 22152015 -123437273 + L2 LINE L2 350 867 -2447 380 283 102 17 chr10 22152162 22152339 -123436949 + L2 LINE L2 864 1055 -2259 376 167 62 21 chr10 22152341 22152437 -123436851 + L1M4 LINE L1 4506 4605 -1541 2183 273 138 8 chr10 22152440 22153289 -123435999 + L2 LINE L2 1061 2019 -1295 370 214 12 24 chr10 22153273 22153357 -123435931 + L2 LINE L2 3229 3311 -2 * 367 261 114 44 chr10 22153738 22154098 -123435190 + L1M4 LINE L1 4479 4863 -1283 1250 226 148 2 chr10 22154216 22154641 -123434647 + Charlie4a DNA MER1_type 22 508 0 1773 169 35 12 chr10 22154669 22155013 -123434275 + MLT1A1 LTR MaLR 14 365 0 2357 149 50 38 chr10 22155984 22156479 -123432809 - L1PA16 LINE L1 0 6166 5666 810 302 56 57 chr10 22156593 22157133 -123432155 + LTR67 LTR ERVL 1 539 -18 2529 57 0 19 chr10 22157140 22157457 -123431831 - AluY SINE Alu 0 311 1 261 301 16 41 chr10 22157809 22157932 -123431356 - MLT1G1 LTR MaLR -16 579 460 2759 115 11 29 chr10 22158920 22159362 -123429926 - Tigger2a DNA MER2_type 0 434 1 490 274 108 32 chr10 22160802 22161034 -123428254 - MIR SINE MIR -13 249 1 189 0 0 0 chr10 22161555 22161576 -123427712 + (CTCA)n Simple_repeat Simple_repeat 1 21 0 396 0 0 0 chr10 22161846 22161890 -123427398 + (A)n Simple_repeat Simple_repeat 1 44 0 634 318 32 12 chr10 22162551 22162803 -123426485 + MIR SINE MIR 6 262 0 1987 154 0 19 chr10 22163691 22164003 -123425285 + AluJo SINE Alu 1 306 -6 218 371 0 0 chr10 22164534 22164623 -123424665 + G-rich Low_complexity Low_complexity 1 89 0 982 47 78 0 chr10 22166029 22166157 -123423131 - MER85 DNA T2_type 0 139 2 2124 126 134 11 chr10 22166879 22167260 -123422028 - MSTA LTR MaLR 0 428 1 180 0 0 0 chr10 22167378 22167398 -123421890 + (T)n Simple_repeat Simple_repeat 1 20 0 21 0 0 0 chr10 22168654 22168675 -123420613 + AT_rich Low_complexity Low_complexity 1 21 0 2426 60 0 13 chr10 22168814 22169112 -123420176 + AluY SINE Alu 1 294 -17 410 211 73 9 chr10 22169637 22169746 -123419542 + LTR37A LTR ERV1 52 167 -259 852 140 13 20 chr10 22169749 22169899 -123419389 - MER44D DNA MER2_type -1 604 456 4627 133 21 9 chr10 22169899 22170711 -123418577 + L1PB3 LINE L1 5331 6152 -2 777 152 85 12 chr10 22170737 22170902 -123418386 - MER44D DNA MER2_type -162 447 1 660 199 75 0 chr10 22170952 22171138 -123418150 + LTR37A LTR ERV1 225 424 -2 1984 114 82 17 chr10 22171967 22172319 -123416969 - THE1C LTR MaLR 0 375 1 25 65 0 0 chr10 22173164 22173210 -123416078 + AT_rich Low_complexity Low_complexity 1 46 0 203 310 69 23 chr10 22173462 22173549 -123415739 - L2 LINE L2 -13 3300 3210 691 188 27 27 chr10 22173618 22173767 -123415521 - MER33 DNA MER1_type -175 149 1 40 37 0 0 chr10 22173973 22174027 -123415261 + AT_rich Low_complexity Low_complexity 1 54 0 313 262 270 0 chr10 22174781 22174907 -123414381 - MIR SINE MIR -26 236 77 235 209 0 0 chr10 22175267 22175310 -123413978 + MER63A DNA MER1_type 1 43 -167 34 24 0 0 chr10 22175310 22175351 -123413937 + AT_rich Low_complexity Low_complexity 1 41 0 254 243 14 0 chr10 22175374 22175444 -123413844 + MER63A DNA MER1_type 140 210 0 2619 103 24 2 chr10 22175700 22176109 -123413179 - L1MA1 LINE L1 0 6302 5885 203 171 0 0 chr10 22177492 22177533 -123411755 + T-rich Low_complexity Low_complexity 1 41 0 1784 186 14 0 chr10 22177577 22177872 -123411416 + AluJo SINE Alu 1 299 -13 222 274 24 24 chr10 22177893 22177977 -123411311 - MIR SINE MIR -38 224 141 1075 157 28 6 chr10 22178984 22179162 -123410126 + AluJo SINE Alu 121 302 -10 276 102 0 0 chr10 22179573 22179622 -123409666 - Alu SINE Alu -1 301 253 761 176 0 0 chr10 22179628 22179753 -123409535 - FLAM_C SINE Alu -18 125 1 373 264 80 49 chr10 22180306 22180469 -123408819 - L1M4 LINE L1 -2195 3951 3784 1357 136 226 0 chr10 22181551 22181794 -123407494 - AluSx SINE Alu -14 298 1 5140 22 0 0 chr10 22181951 22182539 -123406749 - L1PA3 LINE L1 -5 6150 5563 30 0 0 0 chr10 22182995 22183025 -123406263 + AT_rich Low_complexity Low_complexity 1 30 0 1951 153 0 29 chr10 22183087 22183401 -123405887 - AluSx SINE Alu -7 305 1 23 0 0 0 chr10 22184599 22184622 -123404666 + AT_rich Low_complexity Low_complexity 1 23 0 484 291 54 35 chr10 22184712 22184768 -123404520 + MIR SINE MIR 8 61 -201 2218 113 3 0 chr10 22184768 22185060 -123404228 + AluSx SINE Alu 1 293 -19 484 291 54 35 chr10 22185060 22185248 -123404040 + MIR SINE MIR 61 250 -12 2035 85 7 14 chr10 22185259 22185577 -123403711 + AluY SINE Alu 1 316 0 296 279 84 84 chr10 22185938 22186117 -123403171 + MIR3 SINE MIR 28 206 -2 448 325 142 21 chr10 22186202 22186534 -123402754 + L1MC4a LINE L1 4790 5161 -985 1843 274 71 15 chr10 22186622 22187399 -123401889 + L1MC4a LINE L1 5254 6073 -1735 21 36 0 0 chr10 22187437 22187465 -123401823 + AT_rich Low_complexity Low_complexity 1 28 0 228 208 21 0 chr10 22187678 22187726 -123401562 + L1MC4a LINE L1 6611 6659 -1149 239 310 0 14 chr10 22189132 22189203 -123400085 - L2 LINE L2 -62 3251 3182 899 196 7 0 chr10 22189218 22189371 -123399917 + AluJo SINE Alu 124 277 -35 29 0 0 0 chr10 22189376 22189405 -123399883 + AT_rich Low_complexity Low_complexity 1 29 0 2259 102 3 0 chr10 22189629 22189922 -123399366 - AluSx SINE Alu -18 294 1 1675 164 3 50 chr10 22190845 22191163 -123398125 + AluJo SINE Alu 1 303 -9 273 286 247 19 chr10 22192257 22192411 -123396877 + MIR3 SINE MIR 14 202 -6 1907 156 3 31 chr10 22192964 22193285 -123396003 + AluJo SINE Alu 1 312 0 227 145 58 0 chr10 22194565 22194634 -123394654 + (TA)n Simple_repeat Simple_repeat 2 74 0 1001 142 12 6 chr10 22194651 22194820 -123394468 - MER44D DNA MER2_type 0 605 436 1603 53 61 0 chr10 22194820 22195048 -123394240 - L1P5 LINE L1 -597 5554 5313 292 151 0 0 chr10 22195037 22195090 -123394198 + L1PB1 LINE L1 6095 6147 -4 * 930 131 95 12 chr10 22195107 22195275 -123394013 - MER44D DNA MER2_type -157 452 1 352 264 31 8 chr10 22195275 22195404 -123393884 + (TA)n Simple_repeat Simple_repeat 1 132 0 537 325 30 22 chr10 22197140 22197483 -123391805 + L1MC4a LINE L1 5561 5818 -303 32 43 0 0 chr10 22197737 22197783 -123391505 + AT_rich Low_complexity Low_complexity 1 46 0 1735 157 25 7 chr10 22197784 22198065 -123391223 - AluJo SINE Alu -26 286 1 375 219 96 102 chr10 22198639 22198785 -123390503 + MER5A DNA MER1_type 1 147 -42 2381 75 3 0 chr10 22198785 22199079 -123390209 - AluY SINE Alu -16 295 1 375 219 96 102 chr10 22199079 22199119 -123390169 + MER5A DNA MER1_type 147 186 -3 21 0 0 0 chr10 22199217 22199238 -123390050 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr10 22200494 22200514 -123388774 + (A)n Simple_repeat Simple_repeat 1 20 0 2329 133 128 8 chr10 22200632 22201014 -123388274 + MSTA LTR MaLR 1 428 0 1056 47 78 0 chr10 22201737 22201865 -123387423 + MER85 DNA T2_type 2 139 0 2106 132 3 0 chr10 22253649 22253952 -123335336 + AluY SINE Alu 1 304 -7 551 284 51 33 chr10 22254021 22254301 -123334987 - LTR16A LTR ERVL -1 490 164 442 253 108 6 chr10 22254309 22254467 -123334821 - MER63A DNA MER1_type -36 174 1 22 0 0 0 chr10 22254903 22254925 -123334363 + AT_rich Low_complexity Low_complexity 1 22 0 1634 159 11 39 chr10 22254932 22255215 -123334073 + AluJo SINE Alu 5 279 -33 190 115 39 19 chr10 22255252 22255304 -123333984 + A-rich Low_complexity Low_complexity 3 55 0 3225 168 32 19 chr10 22256160 22256754 -123332534 - LTR26 LTR ERV1 -1 602 1 461 273 99 12 chr10 22256929 22257090 -123332198 + MER5B DNA MER1_type 1 175 -3 2211 113 0 0 chr10 22257618 22257955 -123331333 + AluSq SINE Alu 3 313 0 2200 108 0 0 chr10 22257959 22258247 -123331041 + AluSg SINE Alu 1 288 -22 288 227 0 0 chr10 22258959 22259047 -123330241 + (CA)n Simple_repeat Simple_repeat 2 89 0 1092 223 34 30 chr10 22259628 22259924 -123329364 + AluJo SINE Alu 2 298 -4 1699 128 4 55 chr10 22260382 22260508 -123328780 - AluSq SINE Alu -54 259 153 2613 52 7 0 chr10 22260508 22260815 -123328473 - AluY SINE Alu -2 309 1 1699 128 4 55 chr10 22260815 22260961 -123328327 - AluSq SINE Alu -160 153 1 347 271 187 23 chr10 22261317 22261531 -123327757 - MIR SINE MIR -1 261 13 899 209 0 0 chr10 22262118 22262281 -123327007 + FRAM SINE Alu 1 163 -13 191 323 30 20 chr10 22262367 22262466 -123326822 - MER5A DNA MER1_type -76 113 14 862 223 58 27 chr10 22262710 22262745 -123326543 - MIR SINE MIR -6 256 224 3579 92 4 6 chr10 22262745 22263232 -123326056 + LTR19A LTR ERV1 1 486 0 862 223 58 27 chr10 22263232 22263420 -123325868 - MIR SINE MIR -38 224 26 595 88 0 0 chr10 22263793 22263873 -123325415 - LTR26B LTR ERV1 -451 80 1 1364 168 66 31 chr10 22264019 22264327 -123324961 + L1MB7 LINE L1 5848 6184 0 1497 173 73 30 chr10 22264327 22264791 -123324497 + LTR54 LTR ERV1 1 496 -2 820 194 6 12 chr10 22264950 22265120 -123324168 - L1P3 LINE L1 -530 5624 5456 802 179 23 33 chr10 22265120 22265327 -123323961 + L1M4c LINE L1 1668 1901 -4481 569 198 0 20 chr10 22265339 22265440 -123323848 - FLAM_A SINE Alu -43 99 1 2262 189 27 50 chr10 22265440 22266328 -123322960 + L1M4c LINE L1 1894 2760 -3622 583 195 58 32 chr10 22266573 22266727 -123322561 + L1MA10 LINE L1 6177 6334 0 258 232 18 0 chr10 22266729 22266785 -123322503 + L2 LINE L2 2737 2793 -521 299 236 14 0 chr10 22266818 22266890 -123322398 + L2 LINE L2 3238 3310 -3 21 36 0 0 chr10 22266993 22267021 -123322267 + AT_rich Low_complexity Low_complexity 1 28 0 2453 172 79 16 chr10 22267035 22267541 -123321747 + L1MB8 LINE L1 5588 6125 -53 665 208 7 21 chr10 22267561 22267705 -123321583 - AluSq SINE Alu -20 293 152 1551 157 57 0 chr10 22267870 22268132 -123321156 + AluSg SINE Alu 8 284 -26 27 29 0 0 chr10 22268139 22268173 -123321115 + AT_rich Low_complexity Low_complexity 1 34 0 1111 117 6 53 chr10 22268173 22268344 -123320944 + AluSg/x SINE Alu 127 289 -21 413 213 16 63 chr10 22268434 22268561 -123320727 + MIR SINE MIR 92 212 -50 5353 90 18 42 chr10 22269438 22270315 -123318973 - L1P LINE L1 -2039 4107 3252 843 274 39 8 chr10 22270794 22271053 -123318235 - MER69 DNA AcHobo -2128 398 132 858 113 0 0 chr10 22271054 22271169 -123318119 + AluSg SINE Alu 1 115 -195 2001 144 0 0 chr10 22271171 22271456 -123317832 + AluSg SINE Alu 1 285 -25 889 142 0 68 chr10 22271494 22271699 -123317589 + AluSg SINE Alu 109 299 -13 299 281 76 76 chr10 22271904 22272167 -123317121 + LTR67 LTR ERVL 277 539 -18 2557 57 0 19 chr10 22272174 22272490 -123316798 - AluY SINE Alu -1 310 1 302 243 8 68 chr10 22272821 22272965 -123316323 - MLT1G1 LTR MaLR -2 579 460 2843 118 11 29 chr10 22273953 22274395 -123314893 - Tigger2a DNA MER2_type 0 434 1 415 260 113 35 chr10 22275854 22276067 -123313221 - MIR SINE MIR -33 229 1 189 0 0 0 chr10 22276588 22276609 -123312679 + (CTCA)n Simple_repeat Simple_repeat 1 21 0 387 0 0 0 chr10 22276879 22276922 -123312366 + (A)n Simple_repeat Simple_repeat 1 43 0 564 312 27 14 chr10 22277576 22277834 -123311454 + MIR SINE MIR 4 262 0 1981 154 0 19 chr10 22278722 22279034 -123310254 + AluJo SINE Alu 1 306 -6 218 371 0 0 chr10 22279565 22279654 -123309634 + G-rich Low_complexity Low_complexity 1 89 0 1010 47 78 0 chr10 22281060 22281188 -123308100 - MER85 DNA T2_type 0 139 2 2200 133 128 8 chr10 22281911 22282293 -123306995 - MSTA LTR MaLR 0 428 1 21 0 0 0 chr10 22283680 22283701 -123305587 + AT_rich Low_complexity Low_complexity 1 21 0 314 219 96 102 chr10 22283801 22283841 -123305447 - MER5A DNA MER1_type -3 186 147 2378 68 3 7 chr10 22283841 22284137 -123305151 + AluY SINE Alu 1 295 -16 314 219 96 102 chr10 22284137 22284283 -123305005 - MER5A DNA MER1_type -42 147 1 1727 160 25 7 chr10 22284857 22285138 -123304150 + AluJo SINE Alu 1 286 -26 32 43 0 0 chr10 22285139 22285185 -123304103 + AT_rich Low_complexity Low_complexity 1 46 0 527 324 30 22 chr10 22285439 22285782 -123303506 - L1MC4a LINE L1 -303 5818 5561 352 264 31 8 chr10 22287519 22287648 -123301640 + (TA)n Simple_repeat Simple_repeat 1 132 0 1007 131 95 12 chr10 22287648 22287816 -123301472 + MER44D DNA MER2_type 1 452 -157 309 151 0 0 chr10 22287833 22287886 -123301402 - L1PB1 LINE L1 -4 6147 6095 1612 56 65 0 chr10 22287886 22288101 -123301187 + L1P5 LINE L1 5324 5552 -599 1078 146 12 6 chr10 22288101 22288272 -123301016 + MER44D DNA MER2_type 434 605 0 227 145 58 0 chr10 22288289 22288358 -123300930 + (TA)n Simple_repeat Simple_repeat 2 74 0 1905 156 3 31 chr10 22289638 22289959 -123299329 - AluJo SINE Alu 0 312 1 225 286 247 19 chr10 22290512 22290666 -123298622 - MIR3 SINE MIR -6 202 14 1658 164 3 50 chr10 22291760 22292078 -123297210 - AluJo SINE Alu -9 303 1 2307 99 3 0 chr10 22293001 22293294 -123295994 + AluSx SINE Alu 1 294 -18 29 0 0 0 chr10 22293518 22293547 -123295741 + AT_rich Low_complexity Low_complexity 1 29 0 893 196 7 0 chr10 22293552 22293705 -123295583 - AluJo SINE Alu -35 277 124 224 310 0 14 chr10 22293720 22293791 -123295497 + L2 LINE L2 3182 3251 -62 1559 157 25 47 chr10 22294901 22295219 -123294069 - AluJo SINE Alu -1 311 1 304 321 42 31 chr10 22296458 22296651 -123292637 + MIR SINE MIR 12 206 -56 2002 130 20 3 chr10 22297220 22297521 -123291767 - AluSx SINE Alu -6 306 1 2100 98 4 0 chr10 22298148 22298423 -123290865 + AluSg1 SINE Alu 1 276 -33 439 293 32 104 chr10 22300904 22301279 -123288009 + L2 LINE L2 2915 3262 -10 2159 95 0 3 chr10 22302811 22303123 -123286165 + AluSx SINE Alu 1 311 0 631 287 105 5 chr10 22305081 22305290 -123283998 + MIR SINE MIR 19 248 -14 209 222 0 0 chr10 22305295 22305340 -123283948 + (TTA)n Simple_repeat Simple_repeat 3 47 0 226 299 27 61 chr10 22305349 22305496 -123283792 + MIR SINE MIR 67 208 -54 752 186 20 93 chr10 22305590 22305794 -123283494 + MER20 DNA MER1_type 31 219 0 2105 201 106 27 chr10 22306109 22306630 -123282658 + MER68 LTR ERV1 1 562 0 1938 154 0 13 chr10 22306718 22307029 -123282259 - AluJb SINE Alu -5 307 1 2237 115 0 28 chr10 22307339 22307660 -123281628 + AluSx SINE Alu 1 312 0 234 242 16 0 chr10 22307675 22307737 -123281551 + L1P LINE L1 1900 1962 -4184 212 167 0 0 chr10 22307851 22307887 -123281401 + (CA)n Simple_repeat Simple_repeat 1 36 0 332 275 98 79 chr10 22307895 22308313 -123280975 + L1MEc LINE L1 1877 2302 -4094 21 0 0 0 chr10 22311961 22311982 -123277306 + AT_rich Low_complexity Low_complexity 1 21 0 1461 112 0 15 chr10 22312942 22313148 -123276140 + AluSc SINE Alu 107 309 0 1935 171 0 3 chr10 22313264 22313568 -123275720 + AluJb SINE Alu 3 305 -7 354 243 78 0 chr10 22313761 22313864 -123275424 - MER117 DNA MER1_type -40 157 47 1157 66 0 0 chr10 22314177 22314313 -123274975 - L1PA10 LINE L1 -1 6167 6032 386 0 0 39 chr10 22314313 22314364 -123274924 + (TTTA)n Simple_repeat Simple_repeat 2 50 0 225 156 0 0 chr10 22314364 22314396 -123274892 - AluSx SINE Alu -18 284 253 1913 141 4 0 chr10 22314396 22314672 -123274616 - AluSx SINE Alu -35 277 1 206 143 29 0 chr10 22315182 22315217 -123274071 + (CATA)n Simple_repeat Simple_repeat 3 38 0 1951 151 13 0 chr10 22315255 22315553 -123273735 + AluSx SINE Alu 1 302 -10 1608 179 23 23 chr10 22315553 22315860 -123273428 + AluJo SINE Alu 1 307 -5 28 0 0 0 chr10 22316849 22316877 -123272411 + AT_rich Low_complexity Low_complexity 1 28 0 648 232 55 48 chr10 22316883 22317083 -123272205 + L1ME1 LINE L1 5962 6162 -20 230 245 255 46 chr10 22317314 22317510 -123271778 + HAL1 LINE L1 1347 1583 -924 7368 69 11 12 chr10 22317581 22318901 -123270387 - L1PA8 LINE L1 -10 6162 4842 610 306 50 12 chr10 22319008 22319250 -123270038 + MER112 DNA MER1_type 8 258 -2 2205 166 23 29 chr10 22319390 22319457 -123269831 - MSTB LTR MaLR -2 424 358 1861 109 101 0 chr10 22319457 22319724 -123269564 + AluSc SINE Alu 3 296 -13 2205 166 23 29 chr10 22319724 22320042 -123269246 - MSTB LTR MaLR -68 358 41 1896 116 14 28 chr10 22320042 22320055 -123269233 - L1PA15 LINE L1 0 6165 6153 2122 141 157 5 chr10 22320055 22320424 -123268864 + MSTA LTR MaLR 4 428 0 1896 116 14 28 chr10 22320424 22320694 -123268594 - L1PA15 LINE L1 -12 6153 5886 3116 112 9 2 chr10 22321026 22321473 -123267815 - MER41B LTR ERV1 -91 544 95 627 264 107 5 chr10 22321495 22321692 -123267596 - MIR SINE MIR 0 262 46 1889 228 28 5 chr10 22321700 22322126 -123267162 - MER63B DNA MER1_type 0 436 1 22 35 0 0 chr10 22323214 22323243 -123266045 + AT_rich Low_complexity Low_complexity 1 29 0 2248 80 22 26 chr10 22323484 22323797 -123265491 + AluSx SINE Alu 1 312 0 5778 143 44 9 chr10 22324882 22325377 -123263911 + L1MA8 LINE L1 5285 5761 -530 180 0 0 0 chr10 22325377 22325397 -123263891 + (CA)n Simple_repeat Simple_repeat 2 21 0 5778 143 44 9 chr10 22325397 22325872 -123263416 + L1MA8 LINE L1 5761 6289 -2 2357 76 0 7 chr10 22325970 22326274 -123263014 - AluY SINE Alu -9 302 1 24 32 0 0 chr10 22326903 22326934 -123262354 + AT_rich Low_complexity Low_complexity 1 31 0 384 286 9 9 chr10 22327076 22327181 -123262107 + MIR SINE MIR 37 141 -67 180 0 0 0 chr10 22327823 22327843 -123261445 + (A)n Simple_repeat Simple_repeat 1 20 0 1963 190 45 30 chr10 22327929 22328087 -123261201 - MLT2D LTR ERVL -8 406 252 2026 114 0 44 chr10 22328087 22328404 -123260884 + AluSx SINE Alu 1 303 -9 1963 190 45 30 chr10 22328404 22328645 -123260643 - MLT2D LTR ERVL -162 252 1 248 182 15 76 chr10 22329405 22329471 -123259817 + MIR3 SINE MIR 139 200 -8 189 313 101 0 chr10 22329708 22329807 -123259481 - MIR SINE MIR -53 209 101 2124 218 36 6 chr10 22330611 22331139 -123258149 + L1M4c LINE L1 1935 2478 -3906 328 206 14 0 chr10 22331141 22331214 -123258074 - L1MA10 LINE L1 -1 6333 6260 688 159 0 19 chr10 22331263 22331370 -123257918 + FLAM_A SINE Alu 4 108 -34 204 97 0 0 chr10 22331373 22331404 -123257884 + (GGAGA)n Simple_repeat Simple_repeat 5 35 0 1419 128 66 4 chr10 22332278 22332520 -123256768 + L1MA4 LINE L1 6042 6298 -2 25 51 0 0 chr10 22332520 22332559 -123256729 + AT_rich Low_complexity Low_complexity 1 39 0 232 266 75 11 chr10 22332792 22332886 -123256402 + HAL1b LINE L1 1232 1331 -17 2184 136 0 0 chr10 22333123 22333433 -123255855 + AluSx SINE Alu 1 310 -2 637 262 120 0 chr10 22334906 22335089 -123254199 + MIR SINE MIR 44 248 -14 286 288 64 36 chr10 22335834 22336005 -123253283 + L1ME1 LINE L1 5505 5677 -493 248 261 72 68 chr10 22336029 22336251 -123253037 + L1ME1 LINE L1 5777 5999 -167 1713 146 57 36 chr10 22336915 22337216 -123252072 - AluJb SINE Alu -5 307 1 378 111 0 0 chr10 22339782 22339836 -123249452 - MER5A DNA MER1_type -2 187 134 1326 271 69 15 chr10 22339854 22340333 -123248955 + L2 LINE L2 1559 2063 -1251 844 221 12 0 chr10 22340333 22340505 -123248783 + MLT1B LTR MaLR 1 174 -216 322 237 34 45 chr10 22340539 22340777 -123248511 + (ATATG)n Simple_repeat Simple_repeat 1 235 0 215 82 52 67 chr10 22340813 22340948 -123248340 + (TA)n Simple_repeat Simple_repeat 1 133 0 1877 135 0 80 chr10 22341759 22342086 -123247202 + AluJb SINE Alu 6 306 -6 1476 153 91 11 chr10 22342987 22343298 -123245990 + AluSx SINE Alu 1 312 0 940 174 0 0 chr10 22343298 22343453 -123245835 + AluJb SINE Alu 134 288 -24 190 172 0 0 chr10 22345034 22345063 -123244225 - L2 LINE L2 -18 3254 3226 2489 57 3 0 chr10 22346347 22346646 -123242642 - AluY SINE Alu -11 300 1 298 376 31 47 chr10 22346946 22347074 -123242214 + L3 LINE CR1 1281 1405 -172 1730 148 31 14 chr10 22347074 22347364 -123241924 + AluJb SINE Alu 1 295 -17 298 376 31 47 chr10 22347364 22347490 -123241798 + L3 LINE CR1 1405 1531 -46 764 240 203 31 chr10 22347788 22348109 -123241179 + MLT1K LTR MaLR 210 585 -3 1784 168 0 11 chr10 22348252 22348564 -123240724 - AluJo SINE Alu 0 309 1 1655 159 29 0 chr10 22350278 22350555 -123238733 + AluJo SINE Alu 9 293 -19 229 161 16 16 chr10 22350555 22350617 -123238671 + (TTA)n Simple_repeat Simple_repeat 1 62 0 459 252 160 0 chr10 22350889 22351020 -123238268 - MER5B DNA MER1_type -2 176 25 1165 233 55 70 chr10 22351052 22351184 -123238104 - MLT1C LTR MaLR -3 464 332 2052 140 13 3 chr10 22351184 22351492 -123237796 - AluSq SINE Alu -2 311 1 1165 233 55 70 chr10 22351492 22351783 -123237505 - MLT1C LTR MaLR -135 332 59 2028 149 0 0 chr10 22352083 22352378 -123236910 + AluSx SINE Alu 1 295 -17 874 166 6 19 chr10 22352553 22352710 -123236578 + FRAM SINE Alu 4 158 -18 2177 125 0 3 chr10 22352710 22353013 -123236275 + AluSx SINE Alu 1 302 -10 2293 79 0 3 chr10 22353168 22353458 -123235830 + AluY SINE Alu 1 289 -22 321 26 0 0 chr10 22353458 22353496 -123235792 + (TA)n Simple_repeat Simple_repeat 2 39 0 218 299 140 19 chr10 22354114 22354221 -123235067 + MIR SINE MIR 108 227 -35 185 260 40 0 chr10 22354191 22354241 -123235047 + L2 LINE L2 3201 3252 -20 * 1413 206 20 13 chr10 22354744 22355145 -123234143 + L1MB8 LINE L1 5512 5948 -230 2223 99 7 3 chr10 22355614 22355916 -123233372 - AluY SINE Alu -8 303 1 571 295 95 17 chr10 22355987 22356228 -123233060 + MIR SINE MIR 3 262 0 2223 99 7 3 chr10 22357519 22357821 -123231467 - AluY SINE Alu -8 303 1 1844 152 0 7 chr10 22357839 22358149 -123231139 - AluJo SINE Alu 0 308 1 3546 176 19 39 chr10 22358805 22359206 -123230082 + L1MB3 LINE L1 5219 5626 -548 2365 106 0 6 chr10 22359206 22359518 -123229770 + AluSx SINE Alu 3 312 0 3546 176 19 39 chr10 22359518 22360127 -123229161 + L1MB3 LINE L1 5626 6173 -1 2283 77 0 11 chr10 22360366 22360691 -123228597 + AluY SINE Alu 1 322 0 315 243 50 60 chr10 22362426 22362559 -123226729 - MIR SINE MIR -62 146 52 841 259 43 21 chr10 22363209 22363491 -123225797 - MARNA DNA Mariner -19 567 280 235 255 69 88 chr10 22363698 22363888 -123225400 - MARNA DNA Mariner -357 229 42 2169 126 7 3 chr10 22363888 22364198 -123225090 - AluSx SINE Alu -1 311 1 235 255 69 88 chr10 22364198 22364223 -123225065 - MARNA DNA Mariner -544 42 18 1954 218 24 27 chr10 22364430 22364989 -123224299 + L1MC4 LINE L1 6441 7089 -797 1693 248 116 8 chr10 22365024 22365524 -123223764 + L1MC4 LINE L1 7352 7905 -137 270 0 0 0 chr10 22365579 22365609 -123223679 + (A)n Simple_repeat Simple_repeat 1 30 0 2181 123 3 0 chr10 22365805 22366105 -123223183 - AluSx SINE Alu -11 301 1 231 159 116 87 chr10 22366112 22366181 -123223107 - MER21A LTR ERV1 -295 636 566 1650 124 0 0 chr10 22366647 22366873 -123222415 + AluJb SINE Alu 42 267 -45 1036 101 0 71 chr10 22367501 22367670 -123221618 + AluSg/x SINE Alu 154 310 0 1662 173 0 43 chr10 22368383 22368684 -123220604 + AluJo SINE Alu 1 288 -24 1994 152 3 0 chr10 22369539 22369841 -123219447 + AluJb SINE Alu 1 303 -9 745 239 146 58 chr10 22371031 22371263 -123218025 - MLT1I LTR MaLR 0 409 130 1447 189 60 7 chr10 22371263 22371544 -123217744 + AluJo SINE Alu 3 298 -14 745 239 146 58 chr10 22371544 22371687 -123217601 - MLT1I LTR MaLR -279 130 1 248 315 11 11 chr10 22371778 22371867 -123217421 - MER117 DNA MER1_type -107 90 2 285 278 26 17 chr10 22373015 22373130 -123216158 + L2 LINE L2 2217 2332 -982 1205 108 165 19 chr10 22373381 22373593 -123215695 - MER2 DNA MER2_type -97 248 6 244 381 127 11 chr10 22373843 22374213 -123215075 + L2 LINE L2 2222 2634 -680 1618 173 7 22 chr10 22374692 22374970 -123214318 - AluJo SINE Alu -34 278 5 216 0 0 0 chr10 22375269 22375293 -123213995 + (TTCA)n Simple_repeat Simple_repeat 3 26 0 387 0 0 0 chr10 22375629 22375672 -123213616 + (TAA)n Simple_repeat Simple_repeat 1 43 0 1650 130 4 65 chr10 22377117 22377263 -123212025 + AluSq SINE Alu 1 124 -189 2596 55 7 0 chr10 22377263 22377572 -123211716 + AluY SINE Alu 1 311 0 1650 130 4 65 chr10 22377572 22377701 -123211587 + AluSq SINE Alu 124 259 -54 323 266 79 96 chr10 22378075 22378252 -123211036 + MER5A DNA MER1_type 16 189 0 426 247 162 45 chr10 22378898 22379052 -123210236 + MIR3 SINE MIR 21 192 -16 360 0 0 0 chr10 22379531 22379571 -123209717 + (TG)n Simple_repeat Simple_repeat 2 41 0 1541 197 25 4 chr10 22379571 22379850 -123209438 - AluJo SINE Alu -27 285 1 23 0 0 0 chr10 22380154 22380177 -123209111 + AT_rich Low_complexity Low_complexity 1 23 0 2105 98 0 27 chr10 22380213 22380509 -123208779 + AluSg SINE Alu 1 288 -22 288 227 0 0 chr10 22381222 22381310 -123207978 + (CA)n Simple_repeat Simple_repeat 2 89 0 1435 193 13 27 chr10 22381891 22382192 -123207096 + AluJo SINE Alu 3 299 -13 23 0 0 0 chr10 22383006 22383029 -123206259 + AT_rich Low_complexity Low_complexity 1 23 0 598 279 97 21 chr10 22384362 22384717 -123204571 + MLT1J LTR MaLR 101 503 -8 197 315 14 41 chr10 22384956 22385029 -123204259 - L2 LINE L2 -19 3253 3183 5399 224 83 60 chr10 22385305 22385864 -123203424 - L1ME1 LINE L1 -5 6230 5685 1549 85 43 9 chr10 22385864 22386075 -123203213 - L1PA10 LINE L1 -1 6167 5950 5399 224 83 60 chr10 22386075 22386258 -123203030 - L1ME1 LINE L1 -550 5685 5508 2298 84 0 3 chr10 22386258 22386555 -123202733 - AluY SINE Alu -15 296 1 5399 224 83 60 chr10 22386555 22388226 -123201062 - L1ME1 LINE L1 -727 5508 3758 23073 74 11 2 chr10 22388228 22391951 -123197337 - L1PA6 LINE L1 -2 6152 2405 9014 89 2 5 chr10 22391951 22393185 -123196103 - L1P LINE L1 -1899 4247 3018 1022 251 130 22 chr10 22393188 22393634 -123195654 - L1ME1 LINE L1 -2453 3762 3269 8441 79 3 6 chr10 22393932 22395802 -123193486 + L1PA6 LINE L1 4278 6154 0 523 173 0 16 chr10 22396069 22396196 -123193092 + GA-rich Low_complexity Low_complexity 3 127 0 4222 225 63 35 chr10 22396898 22399220 -123190068 - L1ME1 LINE L1 -2936 3279 917 1506 226 11 58 chr10 22399224 22399605 -123189683 - MLT1A2 LTR MaLR -11 363 1 1962 243 90 55 chr10 22399605 22399714 -123189574 - L1ME1 LINE L1 -5472 924 820 1698 196 7 7 chr10 22399714 22400020 -123189268 - AluJo SINE Alu -6 306 1 1962 243 90 55 chr10 22400020 22400764 -123188524 - L1ME1 LINE L1 -5576 820 42 626 274 63 38 chr10 22400837 22401074 -123188214 + MIR SINE MIR 3 245 -17 426 209 64 0 chr10 22402311 22402421 -123186867 - L1MC4 LINE L1 0 8042 7926 233 254 35 21 chr10 22402421 22402563 -123186725 + (TA)n Simple_repeat Simple_repeat 2 145 0 * 251 153 38 61 chr10 22402465 22402596 -123186692 + (TATAA)n Simple_repeat Simple_repeat 1 128 0 1418 249 120 43 chr10 22402656 22403137 -123186151 - L1MC4 LINE L1 -150 7892 7449 1794 169 3 17 chr10 22403137 22403438 -123185850 + AluJo SINE Alu 1 297 -15 294 29 0 0 chr10 22403438 22403473 -123185815 + (TA)n Simple_repeat Simple_repeat 2 36 0 1418 249 120 43 chr10 22403473 22403708 -123185580 - L1MC4 LINE L1 -592 7450 7120 207 0 0 0 chr10 22403729 22403752 -123185536 + (A)n Simple_repeat Simple_repeat 1 23 0 265 386 58 0 chr10 22404648 22404819 -123184469 - L3 LINE CR1 -1 1576 1396 2143 123 0 0 chr10 22405053 22405376 -123183912 - AluSx SINE Alu 0 323 1 206 241 35 17 chr10 22406775 22406891 -123182397 + (TA)n Simple_repeat Simple_repeat 2 119 0 1644 189 3 26 chr10 22407721 22408033 -123181255 + AluJo SINE Alu 1 305 -7 357 125 0 0 chr10 22408245 22408301 -123180987 + (CA)n Simple_repeat Simple_repeat 1 56 0 195 261 92 0 chr10 22409613 22409678 -123179610 - MIR3 SINE MIR -25 183 113 267 156 45 97 chr10 22409700 22409742 -123179546 + L1MC5 LINE L1 6876 6919 -1090 2089 124 0 10 chr10 22409742 22410048 -123179240 + AluSg SINE Alu 1 303 -7 267 156 45 97 chr10 22410048 22410138 -123179150 + L1MC5 LINE L1 6919 7007 -1002 439 306 10 14 chr10 22410214 22410423 -123178865 + L1MC5 LINE L1 6984 7191 -770 574 244 35 103 chr10 22410575 22411087 -123178201 + L1MC5 LINE L1 7260 7736 -225 1200 134 13 38 chr10 22412076 22412315 -123176973 + L1MCa LINE L1 1701 1933 -4493 216 0 0 0 chr10 22412321 22412345 -123176943 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 576 198 0 20 chr10 22412360 22412461 -123176827 - FLAM_A SINE Alu -43 99 1 5103 217 24 24 chr10 22412461 22414474 -123174814 + L1MCa LINE L1 1938 3951 -2475 4480 179 30 9 chr10 22415027 22416226 -123173062 - L1MB7 LINE L1 -19 6165 4940 511 283 109 30 chr10 22416492 22416722 -123172566 + MIR SINE MIR 15 262 0 2137 126 3 13 chr10 22416989 22417291 -123171997 + AluSx SINE Alu 1 299 -13 247 293 75 35 chr10 22417884 22418058 -123171230 + MARNA DNA Mariner 104 284 -302 246 400 23 17 chr10 22419192 22419367 -123169921 + MER5A DNA MER1_type 13 188 -1 895 209 0 0 chr10 22419378 22419541 -123169747 - FRAM SINE Alu -13 163 1 424 271 187 23 chr10 22420129 22420343 -123168945 + MIR SINE MIR 13 261 -1 1468 179 69 35 chr10 22420699 22420989 -123168299 + AluJo SINE Alu 1 300 -12 275 67 44 0 chr10 22420989 22421034 -123168254 + GA-rich Low_complexity Low_complexity 1 47 0 431 311 196 9 chr10 22421643 22421862 -123167426 - MIR SINE MIR 0 262 3 22 0 0 0 chr10 22421866 22421888 -123167400 + AT_rich Low_complexity Low_complexity 1 22 0 1891 113 13 50 chr10 22422915 22423216 -123166072 + AluSx SINE Alu 1 290 -22 21 0 0 0 chr10 22423218 22423239 -123166049 + AT_rich Low_complexity Low_complexity 1 21 0 1791 73 0 0 chr10 22423784 22424017 -123165271 + L1PA8 LINE L1 5938 6170 -2 1774 215 73 18 chr10 22424034 22424583 -123164705 + L1MC4 LINE L1 7463 8041 -1 263 376 97 18 chr10 22425553 22425718 -123163570 + L3b LINE CR1 1368 1545 -38 1141 138 69 62 chr10 22425726 22425986 -123163302 + MER1B DNA MER1_type 78 339 0 197 83 28 0 chr10 22426034 22426070 -123163218 + (TG)n Simple_repeat Simple_repeat 1 37 0 2296 108 3 0 chr10 22426213 22426518 -123162770 + AluSq SINE Alu 1 306 -7 349 326 57 14 chr10 22426684 22426825 -123162463 + MIR3 SINE MIR 42 188 -20 2115 131 0 3 chr10 22427490 22427795 -123161493 + AluSx SINE Alu 1 304 -8 187 319 112 35 chr10 22427797 22427913 -123161375 + MIR SINE MIR 29 153 -55 371 345 125 8 chr10 22428115 22428492 -123160796 + L1MC4a LINE L1 5412 5832 -1976 315 224 0 0 chr10 22428526 22428584 -123160704 + L2 LINE L2 3256 3313 0 316 308 72 37 chr10 22428594 22428808 -123160480 - MIR SINE MIR -43 219 3 212 211 0 0 chr10 22429086 22429124 -123160164 - L2 LINE L2 -16 3256 3219 187 366 98 0 chr10 22430366 22430549 -123158739 + L2 LINE L2 1656 1856 -1458 295 301 228 52 chr10 22430926 22431251 -123158037 - L2 LINE L2 -1 3312 2931 290 197 14 26 chr10 22431286 22431369 -123157919 + MER21A LTR ERV1 1 83 -780 242 158 134 85 chr10 22431464 22431546 -123157742 + MER21A LTR ERV1 70 155 -776 2157 123 0 7 chr10 22431562 22431871 -123157417 - AluSc SINE Alu -2 307 1 2589 188 66 88 chr10 22431912 22432335 -123156953 + MER21A LTR ERV1 115 513 -418 2203 130 0 0 chr10 22432335 22432636 -123156652 - AluSx SINE Alu -11 301 1 2589 188 66 88 chr10 22432636 22433028 -123156260 + MER21A LTR ERV1 513 912 -19 28 29 0 0 chr10 22433200 22433235 -123156053 + AT_rich Low_complexity Low_complexity 1 35 0 730 258 60 95 chr10 22434517 22435105 -123154183 + L2 LINE L2 2652 3313 0 820 163 8 0 chr10 22435515 22435644 -123153644 + FRAM SINE Alu 39 168 -8 454 213 16 63 chr10 22436161 22436288 -123153000 - MIR SINE MIR -50 212 92 1112 128 0 52 chr10 22436378 22436550 -123152738 - AluSg/x SINE Alu -21 291 129 27 29 0 0 chr10 22436550 22436584 -123152704 + AT_rich Low_complexity Low_complexity 1 34 0 1921 118 48 0 chr10 22436591 22436862 -123152426 - AluSg SINE Alu -26 284 1 2288 121 0 0 chr10 22437226 22437524 -123151764 + AluSx SINE Alu 1 298 -14 2830 90 11 54 chr10 22437874 22437968 -123151320 - L1MA2 LINE L1 0 6304 6208 2218 96 0 0 chr10 22437968 22438261 -123151027 + AluSg SINE Alu 1 293 -17 2830 90 11 54 chr10 22438261 22438631 -123150657 - L1MA2 LINE L1 -96 6208 5860 2050 130 3 7 chr10 22440337 22440636 -123148652 + AluSx SINE Alu 1 298 -14 1710 128 13 99 chr10 22440794 22441176 -123148112 + MLT1B LTR MaLR 37 385 -5 298 381 95 6 chr10 22441206 22441374 -123147914 - L3 LINE CR1 -1282 295 113 403 173 90 147 chr10 22441383 22441539 -123147749 - MIR SINE MIR 0 262 116 247 207 69 0 chr10 22441541 22441599 -123147689 - MIR SINE MIR -115 147 86 840 158 0 0 chr10 22444231 22444385 -123144903 - FLAM_C SINE Alu 0 154 1 1178 272 71 67 chr10 22444877 22445565 -123143723 + MER21B LTR ERV1 24 714 -149 476 240 80 29 chr10 22445994 22446169 -123143119 - MIR SINE MIR -4 258 75 256 325 120 40 chr10 22446161 22446435 -123142853 - L2 LINE L2 -417 2897 2602 * 210 296 56 0 chr10 22448186 22448257 -123141031 - MIR SINE MIR -57 205 131 278 77 0 0 chr10 22448650 22448689 -123140599 + 5S rRNA rRNA 2 40 -81 2253 51 0 0 chr10 22449030 22449303 -123139985 + AluY SINE Alu 39 311 0 399 271 130 5 chr10 22449303 22449495 -123139793 + MER112 DNA MER1_type 35 250 -10 361 348 87 5 chr10 22449615 22449822 -123139466 - MIR SINE MIR -7 255 32 607 276 45 71 chr10 22451541 22451820 -123137468 + L1MC4 LINE L1 7630 7915 -127 2255 80 0 7 chr10 22451820 22452121 -123137167 + AluY SINE Alu 1 299 -12 360 0 0 0 chr10 22452121 22452161 -123137127 + (TA)n Simple_repeat Simple_repeat 2 41 0 607 276 45 71 chr10 22452161 22452304 -123136984 + L1MC4 LINE L1 7913 8042 0 2194 112 3 0 chr10 22454107 22454419 -123134869 + AluSp SINE Alu 1 313 0 666 250 7 20 chr10 22454613 22454765 -123134523 + MIR SINE MIR 108 257 -5 24 0 0 0 chr10 22456897 22456921 -123132367 + GC_rich Low_complexity Low_complexity 1 24 0 570 283 35 45 chr10 22458218 22458416 -123130872 + MIR SINE MIR 43 238 -24 1776 146 0 42 chr10 22459046 22459354 -123129934 - AluJo SINE Alu -15 297 3 701 220 56 84 chr10 22460156 22460489 -123128799 + MLT1I LTR MaLR 98 547 -2 2356 73 3 0 chr10 22460578 22460881 -123128407 - AluY SINE Alu -7 304 1 258 261 261 13 chr10 22461311 22461468 -123127820 - L2 LINE L2 -1 3312 3117 1830 165 124 81 chr10 22461969 22462150 -123127138 + MLT1D LTR MaLR 1 173 -332 3880 123 36 2 chr10 22462150 22462733 -123126555 + LTR26 LTR ERV1 1 603 0 1830 165 124 81 chr10 22462733 22462909 -123126379 + MLT1D LTR MaLR 173 387 -118 2003 144 3 0 chr10 22462909 22463215 -123126073 + AluSx SINE Alu 1 307 -5 1830 165 124 81 chr10 22463215 22463340 -123125948 + MLT1D LTR MaLR 387 505 0 25 0 0 0 chr10 22464002 22464027 -123125261 + AT_rich Low_complexity Low_complexity 1 25 0 1935 144 0 3 chr10 22464033 22464331 -123124957 + AluSp SINE Alu 1 297 -16 313 140 0 0 chr10 22464351 22464401 -123124887 + L1PA8 LINE L1 6122 6171 -1 1624 181 0 13 chr10 22465243 22465542 -123123746 + AluJo SINE Alu 1 295 -17 1340 158 60 54 chr10 22465724 22466040 -123123248 - MER33 DNA MER1_type -2 322 5 239 308 0 33 chr10 22466299 22466416 -123122872 + GA-rich Low_complexity Low_complexity 4 176 0 2398 118 19 16 chr10 22466798 22467161 -123122127 + THE1B LTR MaLR 1 364 0 359 247 205 8 chr10 22467772 22468011 -123121277 + L1ME4a LINE L1 5814 6099 -22 2256 82 7 7 chr10 22468541 22468847 -123120441 - AluSx SINE Alu -2 310 5 22 0 0 0 chr10 22469285 22469307 -123119981 + AT_rich Low_complexity Low_complexity 1 22 0 201 39 0 0 chr10 22469307 22469333 -123119955 + (CA)n Simple_repeat Simple_repeat 2 27 0 22 0 0 0 chr10 22469548 22469570 -123119718 + AT_rich Low_complexity Low_complexity 1 22 0 390 21 0 0 chr10 22469570 22469617 -123119671 + (CA)n Simple_repeat Simple_repeat 2 48 0 424 189 0 63 chr10 22469620 22469715 -123119573 + MLT1A1 LTR MaLR 24 112 -253 1748 158 41 35 chr10 22469729 22469866 -123119422 + MER2 DNA MER2_type 1 136 -209 1711 109 0 0 chr10 22469866 22470096 -123119192 - MER30 DNA MER1_type 0 230 1 1748 158 41 35 chr10 22470096 22470300 -123118988 + MER2 DNA MER2_type 136 344 -1 384 22 0 0 chr10 22470301 22470346 -123118942 + (TG)n Simple_repeat Simple_repeat 2 46 0 245 167 100 0 chr10 22470365 22470425 -123118863 - L1MCa LINE L1 -4495 1931 1866 204 125 0 0 chr10 22470437 22470469 -123118819 + (CATA)n Simple_repeat Simple_repeat 2 33 0 932 129 13 13 chr10 22470493 22470642 -123118646 + THE1C LTR MaLR 216 375 0 2558 195 29 65 chr10 22470646 22470794 -123118494 - L1MCa LINE L1 -5798 628 476 416 66 0 16 chr10 22470794 22470855 -123118433 + (TTA)n Simple_repeat Simple_repeat 1 60 0 1839 135 0 0 chr10 22470863 22471130 -123118158 - AluJb SINE Alu -45 267 1 2558 195 29 65 chr10 22471130 22471603 -123117685 - L1MCa LINE L1 -5957 469 21 1900 120 38 0 chr10 22471915 22472206 -123117082 - AluSq SINE Alu -11 302 1 1230 217 119 65 chr10 22472359 22472768 -123116520 + MLT1D LTR MaLR 1 441 -64 2221 76 0 16 chr10 22472768 22473083 -123116205 - AluY SINE Alu -1 310 1 1230 217 119 65 chr10 22473083 22473152 -123116136 + MLT1D LTR MaLR 441 505 0 252 352 88 8 chr10 22473365 22473490 -123115798 + L2 LINE L2 3137 3271 -1 1648 175 3 16 chr10 22473514 22473822 -123115466 + AluJo SINE Alu 1 304 -8 901 238 71 8 chr10 22474528 22474768 -123114520 - MIR SINE MIR -5 257 3 186 43 0 0 chr10 22475462 22475485 -123113803 + (TTCA)n Simple_repeat Simple_repeat 2 24 0 1411 171 38 7 chr10 22475505 22475792 -123113496 - AluSx SINE Alu -9 303 8 28 0 0 0 chr10 22475935 22475963 -123113325 + AT_rich Low_complexity Low_complexity 1 28 0 1326 173 0 0 chr10 22476147 22476367 -123112921 - AluSq SINE Alu -93 220 1 706 223 0 0 chr10 22476377 22476507 -123112781 - FLAM_C SINE Alu 0 133 4 215 181 21 32 chr10 22476605 22476699 -123112589 + CT-rich Low_complexity Low_complexity 2 94 0 274 204 9 37 chr10 22476754 22476862 -123112426 + CT-rich Low_complexity Low_complexity 2 106 0 1441 155 44 44 chr10 22477322 22477619 -123111669 - AluJo SINE Alu -11 301 5 788 158 30 8 chr10 22477621 22477754 -123111534 - AluJo SINE Alu -175 137 2 2143 117 0 0 chr10 22477930 22478237 -123111051 - AluSg SINE Alu -3 307 1 1092 139 28 0 chr10 22478470 22478685 -123110603 - AluSp SINE Alu -12 301 81 200 222 0 16 chr10 22478943 22479006 -123110282 + T-rich Low_complexity Low_complexity 1 62 0 1057 147 80 46 chr10 22480139 22480266 -123109022 + L1MA4A LINE L1 6056 6177 -126 2191 118 3 0 chr10 22480266 22480570 -123108718 + AluSx SINE Alu 1 305 -7 1057 147 80 46 chr10 22480570 22480680 -123108608 + L1MA4A LINE L1 6177 6301 -2 1380 141 3 141 chr10 22480952 22481124 -123108164 + AluJo SINE Alu 1 100 -212 1931 125 0 7 chr10 22481124 22481434 -123107854 + AluSx SINE Alu 1 308 0 1380 141 3 141 chr10 22481434 22481622 -123107666 + AluJo SINE Alu 100 312 0 1963 166 17 17 chr10 22481851 22482195 -123107093 + MER49 LTR ERV1 1 344 -579 2871 118 4 21 chr10 22482350 22482808 -123106480 - MER1A DNA MER1_type 0 529 1 895 333 32 3 chr10 22482814 22483096 -123106192 - L2 LINE L2 -571 2743 2454 1610 161 54 0 chr10 22483121 22483401 -123105887 - AluJb SINE Alu -17 295 1 203 204 0 19 chr10 22483532 22483586 -123105702 + (TA)n Simple_repeat Simple_repeat 2 54 0 233 234 21 43 chr10 22483587 22483681 -123105607 + L1MC4 LINE L1 6614 6705 -1337 294 159 0 0 chr10 22483694 22483763 -123105525 + (TA)n Simple_repeat Simple_repeat 2 70 0 332 247 47 12 chr10 22483765 22483850 -123105438 + L1MC4 LINE L1 6614 6701 -1341 324 247 21 62 chr10 22483793 22483890 -123105398 - L1MC4 LINE L1 -1336 6706 6614 * 350 241 46 11 chr10 22483882 22483969 -123105319 + L1MC4 LINE L1 6614 6703 -1339 342 242 55 0 chr10 22483890 22483981 -123105307 - L1MC4 LINE L1 -1335 6707 6612 * 369 0 0 0 chr10 22484062 22484103 -123105185 + (TAGA)n Simple_repeat Simple_repeat 2 42 0 252 0 0 0 chr10 22484144 22484172 -123105116 + (GACTG)n Simple_repeat Simple_repeat 4 31 0 2152 174 62 8 chr10 22484269 22484655 -123104633 + MSTB LTR MaLR 20 426 0 1487 177 0 93 chr10 22484865 22485028 -123104260 - MLT1D LTR MaLR -192 313 197 3880 123 36 2 chr10 22485028 22485611 -123103677 - LTR26 LTR ERV1 0 603 1 1487 177 0 93 chr10 22485611 22485792 -123103496 - MLT1D LTR MaLR -308 197 1 258 261 261 13 chr10 22486293 22486450 -123102838 + L2 LINE L2 3117 3312 -1 2216 64 3 0 chr10 22486880 22487223 -123102065 + AluY SINE Alu 1 344 0 642 200 7 37 chr10 22487429 22487564 -123101724 - FLAM_A SINE Alu 0 142 12 1824 116 11 14 chr10 22487626 22487911 -123101377 + AluSx SINE Alu 27 310 -2 484 171 0 0 chr10 22488068 22488144 -123101144 - AluJ/FRAM SINE Alu -20 292 217 225 94 0 0 chr10 22488171 22488203 -123101085 + (A)n Simple_repeat Simple_repeat 1 32 0 705 172 78 0 chr10 22488207 22488335 -123100953 + AluJo SINE Alu 6 143 -169 2807 85 3 0 chr10 22489158 22489562 -123099726 - L1PA2 LINE L1 0 6155 5770 1836 160 3 10 chr10 22489575 22489888 -123099400 - AluJb SINE Alu -1 311 1 2310 126 87 0 chr10 22490357 22490747 -123098541 - L1MA9 LINE L1 -354 5958 5535 2170 110 0 3 chr10 22490993 22491292 -123097996 + AluSx SINE Alu 1 298 -14 22 0 0 0 chr10 22492814 22492836 -123096452 + AT_rich Low_complexity Low_complexity 1 22 0 252 121 0 0 chr10 22492836 22492869 -123096419 + Alu SINE Alu 1 33 -269 223 242 17 75 chr10 22493206 22493326 -123095962 + C-rich Low_complexity Low_complexity 5 117 0 318 260 22 50 chr10 22493328 22493509 -123095779 + (CCCCG)n Simple_repeat Simple_repeat 3 178 0 230 256 30 45 chr10 22493596 22493729 -123095559 + C-rich Low_complexity Low_complexity 3 133 0 817 161 9 85 chr10 22493910 22494134 -123095154 - AluJo SINE Alu -105 207 1 1009 159 53 43 chr10 22494427 22494634 -123094654 + MER3 DNA MER1_type 1 209 0 1319 157 25 103 chr10 22494911 22495047 -123094241 + AluYb8 SINE Alu 3 148 -170 2148 114 0 3 chr10 22495047 22495353 -123093935 + AluSx SINE Alu 1 305 -7 1319 157 25 103 chr10 22495353 22495535 -123093753 + AluYb8 SINE Alu 148 296 -22 328 200 0 15 chr10 22495817 22495882 -123093406 - MER82 DNA MER2_type -580 73 10 1869 158 0 3 chr10 22495890 22496188 -123093100 + AluSx SINE Alu 9 305 -7 679 231 30 0 chr10 22496275 22496409 -123092879 + LTR16C LTR ERVL 146 283 -208 1090 202 20 0 chr10 22496410 22496613 -123092675 + MER58A DNA MER1_type 2 208 -16 683 198 198 0 chr10 22496626 22496808 -123092480 + LTR16C LTR ERVL 274 491 0 1659 181 8 77 chr10 22496946 22497105 -123092183 + MLT1A1 LTR MaLR 1 169 -196 1987 108 63 0 chr10 22497105 22497392 -123091896 + AluSx SINE Alu 6 310 -2 1659 181 8 77 chr10 22497392 22497597 -123091691 + MLT1A1 LTR MaLR 169 340 -25 261 0 0 0 chr10 22497597 22497626 -123091662 + (T)n Simple_repeat Simple_repeat 1 29 0 460 214 39 65 chr10 22498192 22498236 -123091052 + MIR SINE MIR 113 157 -105 2368 200 10 79 chr10 22498236 22498340 -123090948 + MER87 LTR ERV1 1 111 -430 2241 97 0 0 chr10 22498340 22498640 -123090648 - AluSq SINE Alu -13 300 1 2368 200 10 79 chr10 22498640 22499116 -123090172 + MER87 LTR ERV1 111 541 0 460 214 39 65 chr10 22499116 22499225 -123090063 + MIR SINE MIR 157 262 0 1624 172 47 0 chr10 22500648 22500944 -123088344 - AluJb SINE Alu -2 310 1 435 259 68 132 chr10 22502190 22502730 -123086558 - MLT1L LTR MaLR -37 577 46 1547 125 0 26 chr10 22503019 22503251 -123086037 + AluSg/x SINE Alu 85 310 -2 750 235 6 0 chr10 22503288 22503458 -123085830 + MIR SINE MIR 92 262 0 1864 126 0 30 chr10 22503464 22503596 -123085692 - AluSq SINE Alu -52 261 140 2298 109 0 0 chr10 22503596 22503900 -123085388 - AluSq SINE Alu -9 304 1 1864 126 0 30 chr10 22503900 22504036 -123085252 - AluSq SINE Alu -173 140 1 699 186 0 0 chr10 22504063 22504181 -123085107 - FRAM SINE Alu -58 118 1 402 233 75 55 chr10 22504195 22504341 -123084947 + LTR16C LTR ERVL 341 489 -2 2334 75 0 0 chr10 22504437 22504718 -123084570 - AluY SINE Alu -29 282 2 255 272 71 65 chr10 22504826 22504995 -123084293 - MIR SINE MIR -21 241 72 1744 195 65 24 chr10 22505215 22505480 -123083808 + MER63B DNA MER1_type 1 291 -771 1621 184 0 27 chr10 22505480 22505774 -123083514 - AluJo SINE Alu -26 286 1 1744 195 65 24 chr10 22505774 22505923 -123083365 + MER63B DNA MER1_type 291 432 -4 1925 151 7 0 chr10 22505955 22506240 -123083048 + AluSx SINE Alu 1 287 -25 2299 68 51 3 chr10 22506312 22506605 -123082683 - AluSg SINE Alu -3 307 1 744 214 107 41 chr10 22506685 22506881 -123082407 + MER3 DNA MER1_type 1 209 0 995 177 17 0 chr10 22507708 22507883 -123081405 + AluSg/x SINE Alu 131 308 -2 1636 169 59 0 chr10 22507897 22508169 -123081119 + AluJo SINE Alu 1 288 -24 2285 108 0 3 chr10 22508474 22508771 -123080517 + AluSq SINE Alu 1 296 -17 1835 112 93 0 chr10 22509104 22509373 -123079915 + AluSx SINE Alu 1 294 -18 417 39 0 0 chr10 22509638 22509689 -123079599 + (CA)n Simple_repeat Simple_repeat 2 52 0 387 0 0 0 chr10 22509988 22510031 -123079257 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 726 111 0 0 chr10 22510399 22510498 -123078790 - AluS SINE Alu -212 100 2 872 148 0 7 chr10 22510601 22510736 -123078552 + AluJb SINE Alu 85 218 -94 244 170 0 19 chr10 22510736 22510789 -123078499 + FAM SINE Alu 125 176 -3 1545 186 0 39 chr10 22510799 22511111 -123078177 + AluJo SINE Alu 1 300 -12 1160 117 0 6 chr10 22511457 22511639 -123077649 - AluSg/x SINE Alu 0 302 122 2111 102 25 0 chr10 22511650 22511924 -123077364 - AluY SINE Alu -30 281 1 224 280 204 0 chr10 22512062 22512155 -123077133 + L2 LINE L2 3149 3260 -12 1068 224 86 4 chr10 22512156 22512411 -123076877 + L1ME1 LINE L1 5487 5762 -404 577 151 0 0 chr10 22512431 22512517 -123076771 + AluJ/FLAM SINE Alu 2 87 -225 1428 140 91 30 chr10 22512517 22512782 -123076506 + AluJo SINE Alu 21 301 -11 1031 165 41 37 chr10 22512783 22512797 -123076491 + L1ME1 LINE L1 5776 5788 -378 2255 130 122 10 chr10 22512797 22513182 -123076106 + MSTA LTR MaLR 1 428 0 1031 165 41 37 chr10 22513182 22513385 -123075903 + L1ME1 LINE L1 5788 5994 -172 298 327 0 35 chr10 22513405 22513518 -123075770 - MLT1J LTR MaLR -99 412 304 727 182 0 8 chr10 22513523 22513655 -123075633 - L1MB4 LINE L1 -143 6037 5907 1299 147 0 15 chr10 22514022 22514219 -123075069 - AluJb SINE Alu -34 278 85 3663 151 10 16 chr10 22514330 22514941 -123074347 - L1MB4 LINE L1 -259 5924 5318 899 211 6 0 chr10 22514946 22515121 -123074167 - FRAM SINE Alu 0 176 1 1230 216 26 53 chr10 22515121 22515501 -123073787 - L1MB4 LINE L1 -820 5326 4957 239 103 13 51 chr10 22515510 22515588 -123073700 + (TTTTA)n Simple_repeat Simple_repeat 3 77 0 199 26 0 79 chr10 22515653 22515691 -123073597 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 2073 146 3 0 chr10 22515711 22516006 -123073282 + AluSx SINE Alu 1 296 -16 3223 88 20 24 chr10 22516027 22516482 -123072806 + MLT2A2 LTR ERVL 1 453 0 1964 92 81 15 chr10 22516558 22516829 -123072459 + AluSq SINE Alu 1 289 -24 348 209 198 0 chr10 22517390 22517476 -123071812 + MLT1C LTR MaLR 1 103 -364 1513 175 111 47 chr10 22517494 22517837 -123071451 + MLT1A1 LTR MaLR 1 365 0 2212 118 3 0 chr10 22518603 22518900 -123070388 + AluSp SINE Alu 1 298 -15 1011 125 0 7 chr10 22518909 22519053 -123070235 + AluSp SINE Alu 1 143 -170 1117 110 0 0 chr10 22520014 22520168 -123069120 - AluSq SINE Alu -159 154 1 857 129 62 33 chr10 22520168 22520308 -123068980 + L1MA9 LINE L1 6127 6268 -32 2139 87 20 47 chr10 22520308 22520606 -123068682 - AluY SINE Alu -20 291 2 857 129 62 33 chr10 22520606 22520639 -123068649 + L1MA9 LINE L1 6268 6299 -1 1638 158 15 29 chr10 22520656 22520929 -123068359 + AluJo SINE Alu 12 280 -32 185 361 108 8 chr10 22520962 22521092 -123068196 + MIR SINE MIR 50 192 -70 191 302 0 0 chr10 22521685 22521738 -123067550 + L3 LINE CR1 1339 1391 -186 731 245 224 14 chr10 22522275 22522565 -123066723 + MLT1E LTR MaLR 3 353 -240 1108 117 31 162 chr10 22522567 22522781 -123066507 - Tigger2a DNA MER2_type -2274 444 276 1983 146 0 0 chr10 22522781 22523068 -123066220 - AluSx SINE Alu -25 287 1 1108 117 31 162 chr10 22523068 22523143 -123066145 - Tigger2a DNA MER2_type -2442 276 193 48 0 0 0 chr10 22523147 22523195 -123066093 + AT_rich Low_complexity Low_complexity 1 48 0 1290 113 0 49 chr10 22523195 22523399 -123065889 - Tigger2a DNA MER2_type -240 194 1 894 208 4 85 chr10 22523399 22523622 -123065666 + MLT1E LTR MaLR 360 563 -30 433 279 171 8 chr10 22523699 22523957 -123065331 + LTR16C LTR ERVL 188 487 -4 2260 86 0 71 chr10 22523980 22524306 -123064982 - AluSp SINE Alu -10 303 1 1529 160 0 4 chr10 22524307 22524544 -123064744 - AluSg/x SINE Alu -6 306 71 2309 107 0 7 chr10 22524775 22525085 -123064203 - AluSx SINE Alu -4 308 1 280 281 12 0 chr10 22525089 22525171 -123064117 + MIR SINE MIR 102 184 -78 362 207 0 35 chr10 22525397 22525484 -123063804 - FLAM SINE Alu -1 132 49 1687 168 3 13 chr10 22525734 22526032 -123063256 + AluJo SINE Alu 1 295 -17 394 240 20 60 chr10 22526276 22526426 -123062862 - MIR3 SINE MIR -30 178 35 982 216 19 9 chr10 22526628 22526841 -123062447 - MER58B DNA MER1_type 0 341 127 811 153 42 58 chr10 22526851 22527040 -123062248 - AluJo SINE Alu 0 312 127 2046 116 42 0 chr10 22527060 22527344 -123061944 + AluSx SINE Alu 1 296 -16 1846 176 10 0 chr10 22528472 22528768 -123060520 - AluJo SINE Alu -13 299 1 314 250 0 0 chr10 22529065 22529129 -123060159 + MER91 DNA MER1_type 127 190 0 240 221 12 58 chr10 22529207 22529293 -123059995 + MLT1K LTR MaLR 486 567 -21 2411 93 0 0 chr10 22530497 22530798 -123058490 - AluSg SINE Alu -9 301 1 2211 113 0 0 chr10 22530802 22531139 -123058149 - AluSq SINE Alu 0 313 3 461 273 99 12 chr10 22531667 22531828 -123057460 - MER5B DNA MER1_type -3 175 1 3268 165 32 19 chr10 22532003 22532597 -123056691 + LTR26 LTR ERV1 1 602 -1 190 115 39 19 chr10 22533453 22533505 -123055783 + T-rich Low_complexity Low_complexity 3 55 0 1634 159 11 39 chr10 22533542 22533825 -123055463 - AluJo SINE Alu -33 279 5 22 0 0 0 chr10 22533832 22533854 -123055434 + AT_rich Low_complexity Low_complexity 1 22 0 442 253 108 6 chr10 22534290 22534448 -123054840 + MER63A DNA MER1_type 1 174 -36 551 284 51 33 chr10 22534456 22534736 -123054552 + LTR16A LTR ERVL 164 490 -1 2456 98 0 0 chr10 22534805 22535110 -123054178 - AluSx SINE Alu -7 305 1 1506 147 105 0 chr10 22535321 22535587 -123053701 + AluJo SINE Alu 1 294 -18 1857 146 121 34 chr10 22535960 22536433 -123052855 - MER69 DNA AcHobo 0 2526 2013 485 280 69 26 chr10 22536411 22536600 -123052688 - MER69 DNA AcHobo -641 585 389 * 2544 62 7 0 chr10 22536948 22537257 -123052031 - AluY SINE Alu 0 311 1 388 308 34 27 chr10 22538220 22538366 -123050922 + LTR67 LTR ERVL 4 150 -407 771 283 118 33 chr10 22538499 22538747 -123050541 - LTR16C LTR ERVL -12 479 189 1275 189 55 120 chr10 22538747 22539164 -123050124 + MLT1B LTR MaLR 1 390 0 771 283 118 33 chr10 22539164 22539279 -123050009 - LTR16C LTR ERVL -302 189 85 527 191 84 0 chr10 22539437 22539568 -123049720 + LTR67 LTR ERVL 411 552 -5 612 267 113 39 chr10 22539740 22540129 -123049159 + L1ME4a LINE L1 5582 5999 -122 3030 182 39 20 chr10 22541033 22541458 -123047830 - LTR26E LTR ERV1 0 622 180 2251 131 0 0 chr10 22541458 22541770 -123047518 - AluSx SINE Alu 0 312 1 3030 182 39 20 chr10 22541770 22541954 -123047334 - LTR26E LTR ERV1 -442 180 1 824 250 74 46 chr10 22542030 22542314 -123046974 + LTR33 LTR ERVL 38 329 -192 3926 138 25 0 chr10 22542454 22543042 -123046246 - LTR26 LTR ERV1 0 603 1 408 303 28 0 chr10 22543042 22543184 -123046104 - MLT1J2 LTR MaLR -52 398 253 629 224 25 25 chr10 22543217 22543378 -123045910 - MLT1J2 LTR MaLR -281 169 9 313 306 81 8 chr10 22543536 22543660 -123045628 - MLT1J LTR MaLR -146 365 233 610 66 11 44 chr10 22543784 22543875 -123045413 - MER53 DNA DNA 0 189 102 241 333 0 0 chr10 22543962 22544040 -123045248 - MLT1L LTR MaLR -537 78 1 421 348 29 22 chr10 22544050 22544323 -123044965 + MLT1L LTR MaLR 210 484 -131 2176 121 7 7 chr10 22544606 22544911 -123044377 + AluSq SINE Alu 1 305 -8 1777 164 33 7 chr10 22545693 22545997 -123043291 + AluJb SINE Alu 1 312 0 296 172 66 25 chr10 22546505 22546627 -123042661 + (TA)n Simple_repeat Simple_repeat 2 128 0 241 194 54 31 chr10 22546656 22546785 -123042503 + (TA)n Simple_repeat Simple_repeat 1 132 0 242 208 56 28 chr10 22547534 22547606 -123041682 - MIR SINE MIR -20 242 169 309 113 14 28 chr10 22548627 22548698 -123040590 + (TA)n Simple_repeat Simple_repeat 2 71 0 201 241 0 0 chr10 22548859 22548913 -123040375 + GA-rich Low_complexity Low_complexity 3 56 0 664 195 0 27 chr10 22548962 22549147 -123040141 + (CA)n Simple_repeat Simple_repeat 1 180 0 229 330 9 0 chr10 22549205 22549314 -123039974 - L1ME4a LINE L1 -21 6100 5991 985 162 7 0 chr10 22549651 22549805 -123039483 + FRAM SINE Alu 1 146 -30 593 228 43 5 chr10 22549945 22550129 -123039159 - MER69 DNA AcHobo -57 2469 2279 1763 174 0 34 chr10 22550139 22550467 -123038821 - AluJb SINE Alu 0 318 1 1160 286 70 15 chr10 22550470 22550869 -123038419 - MER69 DNA AcHobo -1974 552 132 858 113 0 0 chr10 22550870 22550985 -123038303 + AluSg SINE Alu 1 115 -195 2191 139 0 0 chr10 22550987 22551297 -123037991 + AluSg SINE Alu 1 310 0 1499 87 0 5 chr10 22551305 22551500 -123037788 + AluSg SINE Alu 102 295 -15 407 185 185 0 chr10 22551500 22551619 -123037669 - MER69 DNA AcHobo -1085 141 1 475 319 31 12 chr10 22552047 22552210 -123037078 + MIR SINE MIR 20 185 -77 721 264 81 65 chr10 22553071 22553605 -123035683 - MER34 LTR ERV1 0 542 1 25 65 0 0 chr10 22553724 22553770 -123035518 + AT_rich Low_complexity Low_complexity 1 46 0 2462 156 75 22 chr10 22553972 22554409 -123034879 - L1 LINE L1 -1357 4789 4320 2235 110 7 0 chr10 22554409 22554709 -123034579 - AluSq SINE Alu -10 303 2 2462 156 75 22 chr10 22554709 22554776 -123034512 - L1 LINE L1 -1826 4320 4258 * 3658 151 0 2 chr10 22554768 22555372 -123033916 + L1 LINE L1 4764 5366 -780 1731 156 11 3 chr10 22555375 22555657 -123033631 + AluJo SINE Alu 5 288 -24 832 108 58 7 chr10 22555664 22555803 -123033485 + L1MA9 LINE L1 6161 6306 -6 2051 131 7 0 chr10 22555996 22556286 -123033002 - AluSx SINE Alu -4 308 17 1227 137 0 0 chr10 22556683 22556858 -123032430 - AluSq SINE Alu -138 175 1 180 321 84 46 chr10 22556864 22556995 -123032293 + MER5B DNA MER1_type 41 176 -2 1526 145 83 18 chr10 22557893 22558169 -123031119 - AluJo SINE Alu -17 295 2 494 61 0 0 chr10 22558170 22558236 -123031052 - L1 LINE L1 -1823 4323 4258 * 3658 151 0 2 chr10 22558228 22558832 -123030456 + L1 LINE L1 4764 5366 -780 1731 156 11 3 chr10 22558835 22559117 -123030171 + AluJo SINE Alu 5 288 -24 832 108 58 7 chr10 22559124 22559263 -123030025 + L1MA9 LINE L1 6161 6306 -6 2051 131 7 0 chr10 22559456 22559746 -123029542 - AluSx SINE Alu -4 308 17 948 102 0 22 chr10 22560121 22560258 -123029030 + AluJo SINE Alu 1 134 -178 931 96 0 22 chr10 22560714 22560849 -123028439 + FLAM_C SINE Alu 1 132 -1 7371 125 28 6 chr10 22561146 22561314 -123027974 - L1MA3 LINE L1 0 7724 7561 2210 130 0 0 chr10 22561314 22561613 -123027675 - AluSq SINE Alu -14 299 1 7371 125 28 6 chr10 22561613 22563682 -123025606 - L1MA3 LINE L1 -163 7561 5438 * 11920 145 26 1 chr10 22563659 22565505 -123023783 - L1MA3 LINE L1 -5657 1908 15 1319 27 0 22 chr10 22566207 22566391 -123022897 + (TTC)n Simple_repeat Simple_repeat 1 180 0 1621 209 3 3 chr10 22566693 22567004 -123022284 - AluJo SINE Alu -1 311 1 339 255 112 81 chr10 22567504 22567665 -123021623 + MLT1I LTR MaLR 244 409 0 1758 186 0 0 chr10 22567689 22567979 -123021309 + AluJb SINE Alu 1 290 -22 201 247 216 10 chr10 22568268 22568365 -123020923 + MIR SINE MIR 35 151 -111 226 352 80 0 chr10 22568753 22568878 -123020410 + MIR SINE MIR 20 154 -108 2130 130 0 0 chr10 22569155 22569455 -123019833 - AluSx SINE Alu -12 300 1 359 279 70 8 chr10 22569652 22569781 -123019507 - L2 LINE L2 0 3272 3136 2456 90 3 0 chr10 22569808 22570119 -123019169 + AluSx SINE Alu 1 312 0 1966 166 17 17 chr10 22570348 22570692 -123018596 + MER49 LTR ERV1 1 344 -579 2867 117 5 7 chr10 22570847 22571256 -123018032 - MER1A DNA MER1_type 0 529 122 799 333 32 3 chr10 22571311 22571593 -123017695 - L2 LINE L2 -571 2743 2454 1746 157 54 0 chr10 22571618 22571898 -123017390 - AluJb SINE Alu -17 295 1 203 204 0 19 chr10 22572029 22572083 -123017205 + (TA)n Simple_repeat Simple_repeat 1 53 0 247 234 21 43 chr10 22572084 22572178 -123017110 + L1MC4 LINE L1 6614 6705 -1337 741 144 27 0 chr10 22572191 22572493 -123016795 + (TA)n Simple_repeat Simple_repeat 1 310 0 369 0 0 0 chr10 22572559 22572600 -123016688 + (TAGA)n Simple_repeat Simple_repeat 2 42 0 252 0 0 0 chr10 22572641 22572669 -123016619 + (GACTG)n Simple_repeat Simple_repeat 4 31 0 2139 174 62 8 chr10 22572766 22573152 -123016136 + MSTB LTR MaLR 20 426 0 1902 150 0 10 chr10 22573563 22573857 -123015431 + AluJo SINE Alu 1 291 -21 1708 138 87 0 chr10 22573889 22574165 -123015123 - AluSx SINE Alu -12 300 1 2283 115 0 10 chr10 22574887 22575199 -123014089 - AluSx SINE Alu -3 309 1 748 267 36 24 chr10 22575360 22575607 -123013681 - MIR SINE MIR 0 262 13 2231 110 0 0 chr10 22575724 22576055 -123013233 - AluSx SINE Alu 0 312 1 2092 130 0 0 chr10 22576164 22576449 -123012839 - AluSx SINE Alu -19 293 9 2306 84 9 37 chr10 22577048 22577370 -123011918 + AluSq SINE Alu 1 313 0 2448 71 3 0 chr10 22578366 22578660 -123010628 + AluY SINE Alu 1 295 -16 1835 112 93 0 chr10 22578992 22579261 -123010027 + AluSx SINE Alu 1 294 -18 417 39 0 0 chr10 22579526 22579577 -123009711 + (CA)n Simple_repeat Simple_repeat 2 52 0 387 0 0 0 chr10 22579876 22579919 -123009369 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 1979 159 0 10 chr10 22580550 22580864 -123008424 + AluJb SINE Alu 1 311 -1 2623 80 42 13 chr10 22580875 22581261 -123008027 + L1PA15 LINE L1 5768 6164 -1 1704 130 0 20 chr10 22581926 22582180 -123007108 - AluSx SINE Alu -6 306 58 300 135 38 38 chr10 22582505 22582652 -123006636 + GA-rich Low_complexity Low_complexity 1 147 0 28 48 0 0 chr10 22582673 22582715 -123006573 + AT_rich Low_complexity Low_complexity 1 42 0 1168 124 20 50 chr10 22582801 22583003 -123006285 - AluSg/x SINE Alu -15 295 100 902 159 0 0 chr10 22583128 22583266 -123006022 + AluJb SINE Alu 166 303 -9 2307 113 0 3 chr10 22583317 22583626 -123005662 - AluSx SINE Alu -4 308 1 280 281 12 0 chr10 22583630 22583712 -123005576 + MIR SINE MIR 102 184 -78 362 207 0 35 chr10 22583938 22584025 -123005263 - FLAM SINE Alu -1 132 49 1687 168 3 13 chr10 22584275 22584573 -123004715 + AluJo SINE Alu 1 295 -17 402 240 20 60 chr10 22584817 22584967 -123004321 - MIR3 SINE MIR -30 178 35 982 216 19 9 chr10 22585169 22585382 -123003906 - MER58B DNA MER1_type 0 341 127 811 153 42 58 chr10 22585392 22585581 -123003707 - AluJo SINE Alu 0 312 127 484 232 30 0 chr10 22585581 22585601 -123003687 - MER58B DNA MER1_type -239 102 84 1953 135 34 3 chr10 22585601 22585897 -123003391 + AluSx SINE Alu 1 305 -7 484 232 30 0 chr10 22585897 22585975 -123003313 - MER58B DNA MER1_type -257 84 1 2073 114 32 23 chr10 22586723 22587031 -123002257 - AluSx SINE Alu -1 311 1 697 195 0 0 chr10 22587454 22587577 -123001711 - FLAM_A SINE Alu -10 123 1 200 200 0 0 chr10 22587579 22587614 -123001674 + T-rich Low_complexity Low_complexity 2 36 0 1702 203 27 25 chr10 22587620 22588025 -123001263 - L1MC1 LINE L1 -6 6327 5922 4045 91 0 30 chr10 22588778 22588959 -123000329 + MER41A LTR ERV1 1 186 -368 2340 83 0 35 chr10 22588959 22589272 -123000016 + AluSx SINE Alu 1 302 -10 4045 91 0 30 chr10 22589272 22589660 -122999628 + MER41A LTR ERV1 186 553 -1 968 180 172 27 chr10 22589661 22589922 -122999366 - MER46C DNA MER2_type -28 310 12 1982 127 0 37 chr10 22590032 22590356 -122998932 + AluSx SINE Alu 1 312 0 859 200 19 0 chr10 22591037 22591192 -122998096 + FRAM SINE Alu 4 161 -15 610 133 10 10 chr10 22591344 22591442 -122997846 + MER4A LTR ERV1 1 98 -566 1657 146 25 55 chr10 22591443 22591798 -122997490 + MER4A LTR ERV1 262 664 0 2247 82 0 23 chr10 22592667 22592970 -122996318 + AluY SINE Alu 1 296 -15 1751 187 0 0 chr10 22593373 22593662 -122995626 + AluSx SINE Alu 3 291 -21 281 183 0 70 chr10 22593674 22593745 -122995543 + L1MC5 LINE L1 5381 5446 -2362 566 220 98 53 chr10 22593761 22594025 -122995263 + L1MC5 LINE L1 7317 7592 -369 454 263 89 17 chr10 22594071 22594250 -122995038 + MIR SINE MIR 70 261 -1 2128 129 0 0 chr10 22594305 22594599 -122994689 + AluSg SINE Alu 1 294 -16 2016 138 0 0 chr10 22594599 22594888 -122994400 + AluSg1 SINE Alu 1 290 -19 294 143 0 0 chr10 22594993 22595042 -122994246 + (TA)n Simple_repeat Simple_repeat 1 49 0 2215 106 0 3 chr10 22595046 22595338 -122993950 - AluSg1 SINE Alu -18 291 1 556 274 44 0 chr10 22596049 22596184 -122993104 + MER58B DNA MER1_type 200 340 -1 3735 142 87 22 chr10 22596460 22597199 -122992089 + LTR48 LTR ERV1 1 787 0 2302 120 0 0 chr10 22597415 22597723 -122991565 + AluSx SINE Alu 1 308 -4 2164 96 33 7 chr10 22597824 22598126 -122991162 + AluSg SINE Alu 1 310 0 315 113 0 0 chr10 22599686 22599739 -122989549 + (T)n Simple_repeat Simple_repeat 1 53 0 2152 102 0 0 chr10 22601270 22601544 -122987744 - AluSx SINE Alu -18 294 21 1595 134 5 0 chr10 22602221 22602444 -122986844 + AluSx SINE Alu 1 224 -88 884 141 0 0 chr10 22602444 22602565 -122986723 + AluSp SINE Alu 132 252 -61 1559 192 7 20 chr10 22602852 22603016 -122986272 - AluJo SINE Alu -14 298 138 1966 118 0 14 chr10 22603016 22603295 -122985993 - AluSx SINE Alu -15 297 23 1559 192 7 20 chr10 22603295 22603432 -122985856 - AluJo SINE Alu -174 138 1 22 0 0 0 chr10 22603789 22603811 -122985477 + AT_rich Low_complexity Low_complexity 1 22 0 561 177 11 33 chr10 22604144 22604325 -122984963 + GA-rich Low_complexity Low_complexity 2 178 0 258 269 68 19 chr10 22604331 22604490 -122984798 + MIR SINE MIR 95 262 0 232 228 123 0 chr10 22604940 22604997 -122984291 - MLT1K LTR MaLR -23 565 502 1892 145 28 3 chr10 22605155 22605444 -122983844 + AluJo SINE Alu 1 296 -16 237 261 216 11 chr10 22605833 22605921 -122983367 - L2 LINE L2 -19 3253 3148 255 61 0 0 chr10 22605953 22605986 -122983302 + (GGGGA)n Simple_repeat Simple_repeat 5 37 0 261 286 14 0 chr10 22606199 22606269 -122983019 - L2 LINE L2 -519 2795 2725 2235 84 11 0 chr10 22606295 22606580 -122982708 - AluSq SINE Alu -25 288 1 760 191 0 0 chr10 22607167 22607298 -122981990 - FLAM_A SINE Alu -2 131 1 2017 131 10 7 chr10 22607560 22607858 -122981430 - AluJb SINE Alu -13 299 1 2497 70 0 16 chr10 22608246 22608560 -122980728 + AluY SINE Alu 1 309 -2 1630 173 14 14 chr10 22608684 22608973 -122980315 + AluJo SINE Alu 1 289 -23 2445 79 3 3 chr10 22609125 22609428 -122979860 + AluSp SINE Alu 1 303 -10 2284 123 0 0 chr10 22609675 22609977 -122979311 + AluSx SINE Alu 3 304 -8 2311 102 0 0 chr10 22610143 22610438 -122978850 + AluSx SINE Alu 1 295 -17 730 179 0 8 chr10 22610981 22611115 -122978173 + FLAM_C SINE Alu 1 133 0 487 266 6 19 chr10 22611263 22611421 -122977867 + MIR SINE MIR 74 229 -33 2646 68 0 0 chr10 22611507 22611818 -122977470 - AluY SINE Alu 0 311 1 1083 36 42 12 chr10 22611818 22611986 -122977302 + (TTTC)n Simple_repeat Simple_repeat 2 174 0 886 185 0 0 chr10 22611990 22612125 -122977163 - AluJo SINE Alu -37 275 141 611 188 0 0 chr10 22612125 22612226 -122977062 - AluJo SINE Alu -207 105 5 223 265 0 29 chr10 22612390 22612458 -122976830 + (TATG)n Simple_repeat Simple_repeat 4 69 0 2019 132 7 0 chr10 22612612 22612908 -122976380 - AluJo SINE Alu -14 298 1 50 31 0 0 chr10 22613009 22613073 -122976215 + AT_rich Low_complexity Low_complexity 1 64 0 2417 96 0 0 chr10 22613206 22613507 -122975781 + AluSc SINE Alu 1 301 -8 2420 80 0 10 chr10 22613507 22613809 -122975479 + AluSq SINE Alu 1 299 -14 460 224 42 55 chr10 22613950 22614115 -122975173 - MER31B LTR ERV1 -287 179 17 1005 208 95 0 chr10 22614308 22614539 -122974749 + L1PB4 LINE L1 5892 6144 -12 1209 118 0 0 chr10 22614540 22614701 -122974587 - AluSp SINE Alu -16 297 137 189 0 0 0 chr10 22615073 22615094 -122974194 + (A)n Simple_repeat Simple_repeat 1 21 0 1421 218 119 13 chr10 22615564 22615949 -122973339 + MER31B LTR ERV1 1 426 -40 2143 117 7 7 chr10 22615950 22616250 -122973038 + AluSx SINE Alu 1 300 -12 2369 96 0 6 chr10 22616256 22616570 -122972718 + AluSx SINE Alu 1 312 0 406 255 38 0 chr10 22616617 22616723 -122972565 + MARNA DNA Mariner 266 375 -211 1178 111 29 0 chr10 22616764 22616936 -122972352 + AluSg/x SINE Alu 123 299 -13 235 253 192 20 chr10 22616963 22617062 -122972226 - MARNA DNA Mariner -396 190 75 1540 130 3 144 chr10 22617210 22617390 -122971898 - AluJo SINE Alu -8 304 100 207 0 0 0 chr10 22617390 22617413 -122971875 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2048 125 0 7 chr10 22617413 22617700 -122971588 - AluSx SINE Alu -27 285 1 1540 130 3 144 chr10 22617700 22617872 -122971416 - AluJo SINE Alu -210 102 1 902 139 74 55 chr10 22618144 22618254 -122971034 - L1MA4A LINE L1 -2 6301 6184 2365 118 0 0 chr10 22618254 22618559 -122970729 - AluSx SINE Alu -7 305 1 902 139 74 55 chr10 22618559 22618650 -122970638 - L1MA4A LINE L1 -119 6184 6096 398 156 26 0 chr10 22619132 22619209 -122970079 + AluSp/q SINE Alu 225 303 0 553 131 19 0 chr10 22619211 22619318 -122969970 - L1MA4A LINE L1 -231 6072 5964 2247 65 43 0 chr10 22619663 22619941 -122969347 - AluY SINE Alu -20 291 2 1040 147 147 0 chr10 22619965 22620142 -122969146 - AluJo SINE Alu -26 286 84 887 319 65 18 chr10 22620457 22620906 -122968382 + L3b LINE CR1 1111 1580 -3 283 268 124 0 chr10 22621818 22621915 -122967373 + L2 LINE L2 3189 3297 -16 1587 158 40 0 chr10 22621944 22622197 -122967091 - AluJo SINE Alu -49 263 1 2364 164 56 92 chr10 22622902 22623233 -122966055 - L1PB4 LINE L1 -17 6139 5837 2492 41 3 7 chr10 22623233 22623524 -122965764 - AluY SINE Alu -12 299 10 2364 164 56 92 chr10 22623524 22623782 -122965506 - L1PB4 LINE L1 -319 5837 5571 2214 100 10 7 chr10 22623792 22624092 -122965196 - AluSx SINE Alu -11 301 1 2260 115 0 0 chr10 22624092 22624396 -122964892 - AluSx SINE Alu -8 304 1 180 321 84 46 chr10 22624402 22624533 -122964755 + MER5B DNA MER1_type 41 176 -2 1505 146 84 18 chr10 22625431 22625705 -122963583 - AluJo SINE Alu -17 295 4 334 239 10 166 chr10 22626130 22626192 -122963096 - MER5B DNA MER1_type -5 173 103 2537 49 3 7 chr10 22626192 22626500 -122962788 + AluY SINE Alu 1 307 -4 334 239 10 166 chr10 22626500 22626583 -122962705 - MER5B DNA MER1_type -75 103 9 2311 115 3 0 chr10 22626583 22626888 -122962400 + AluSx SINE Alu 1 306 -6 334 239 10 166 chr10 22626888 22626899 -122962389 - MER5B DNA MER1_type -169 9 52 2236 104 7 0 chr10 22626899 22627196 -122962092 + AluSq SINE Alu 5 303 -10 334 239 10 166 chr10 22627196 22627242 -122962046 - MER5B DNA MER1_type -125 53 1 2156 105 3 0 chr10 22627285 22627570 -122961718 + AluSx SINE Alu 23 308 -4 1663 155 19 11 chr10 22627681 22627786 -122961502 + AluJb SINE Alu 30 133 -179 2197 126 3 0 chr10 22627786 22628088 -122961200 + AluSx SINE Alu 1 303 -9 1663 155 19 11 chr10 22628088 22628253 -122961035 + AluJb SINE Alu 133 302 -10 978 19 0 0 chr10 22628370 22628477 -122960811 + U6 snRNA snRNA 1 107 0 7992 12 0 0 chr10 22628479 22629687 -122959601 + L1PA2 LINE L1 4967 6155 0 702 172 78 0 chr10 22630506 22630634 -122958654 - AluJo SINE Alu -169 143 6 225 94 0 0 chr10 22630638 22630670 -122958618 + (T)n Simple_repeat Simple_repeat 1 32 0 483 171 0 0 chr10 22630697 22630773 -122958515 + AluJ/FRAM SINE Alu 217 292 -20 1931 116 11 14 chr10 22630930 22631215 -122958073 - AluSx SINE Alu -2 310 27 654 199 7 37 chr10 22631275 22631411 -122957877 + FLAM_A SINE Alu 11 142 0 2221 57 0 4 chr10 22631617 22631942 -122957346 - AluY SINE Alu 0 344 21 26 30 0 0 chr10 22631947 22631980 -122957308 + AT_rich Low_complexity Low_complexity 1 33 0 1858 175 3 0 chr10 22631987 22632279 -122957009 + AluJb SINE Alu 1 293 -19 533 117 65 5 chr10 22632312 22632932 -122956356 + (TA)n Simple_repeat Simple_repeat 1 657 0 385 126 55 12 chr10 22633251 22633512 -122955776 + (TA)n Simple_repeat Simple_repeat 1 272 0 267 139 72 0 chr10 22633524 22633690 -122955598 + (TA)n Simple_repeat Simple_repeat 2 179 0 1724 186 0 7 chr10 22633844 22634145 -122955143 + AluJo SINE Alu 1 299 -13 2320 101 13 0 chr10 22634944 22635124 -122954164 - AluSx SINE Alu -1 311 124 225 0 0 0 chr10 22635124 22635149 -122954139 + (TG)n Simple_repeat Simple_repeat 2 26 0 2320 101 13 0 chr10 22635149 22635275 -122954013 - AluSx SINE Alu -188 124 1 3757 143 19 36 chr10 22635336 22635616 -122953672 - L1MB3 LINE L1 -71 6112 5829 2315 98 13 0 chr10 22635616 22635923 -122953365 - AluSp SINE Alu -2 311 1 3757 143 19 36 chr10 22635923 22636332 -122952956 - L1MB3 LINE L1 -354 5829 5435 404 143 0 0 chr10 22636338 22636401 -122952887 - Alu SINE Alu -16 296 234 2313 87 7 0 chr10 22636442 22636728 -122952560 - AluSx SINE Alu -19 293 6 269 143 0 0 chr10 22636735 22636777 -122952511 - L1MB3 LINE L1 -744 5439 5398 1986 145 3 35 chr10 22637111 22637429 -122951859 + AluJo SINE Alu 1 308 -4 2280 116 0 0 chr10 22637885 22638187 -122951101 - AluSg SINE Alu -8 302 1 296 83 0 21 chr10 22638192 22638240 -122951048 + MADE1 DNA Mariner 34 80 0 1213 195 17 47 chr10 22638438 22638736 -122950552 - AluJo SINE Alu -13 289 1 220 276 51 31 chr10 22639159 22639257 -122950031 + MIR SINE MIR 27 126 -136 183 114 0 0 chr10 22639257 22639292 -122949996 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 2471 74 3 3 chr10 22639470 22639769 -122949519 + AluSp SINE Alu 1 299 -14 1654 257 124 17 chr10 22640188 22640243 -122949045 - L1MB3 LINE L1 -891 5255 5207 1977 147 23 0 chr10 22640243 22640542 -122948746 - AluJo SINE Alu -6 306 1 1654 257 124 17 chr10 22640542 22641140 -122948148 - L1MB3 LINE L1 -939 5207 4532 261 155 138 0 chr10 22641180 22641238 -122948050 - L1MB3 LINE L1 -1600 4546 4481 995 147 0 0 chr10 22641249 22641399 -122947889 - AluJb SINE Alu -3 309 160 2403 75 3 13 chr10 22641399 22641707 -122947581 - HERVL LTR ERVL -2165 3489 3185 2403 202 60 21 chr10 22641707 22641757 -122947531 - MLT1F1 LTR MaLR -12 555 508 1704 154 95 0 chr10 22641757 22642042 -122947246 - AluJb SINE Alu 0 312 1 2294 123 3 0 chr10 22642045 22642354 -122946934 - AluSq SINE Alu -3 310 1 2403 202 60 21 chr10 22642354 22642833 -122946455 - MLT1F1 LTR MaLR -60 507 1 21 36 0 0 chr10 22643071 22643099 -122946189 + AT_rich Low_complexity Low_complexity 1 28 0 1805 143 0 0 chr10 22643365 22643630 -122945658 - AluSx SINE Alu -15 297 33 2294 91 0 7 chr10 22644037 22644333 -122944955 - AluSg1 SINE Alu -15 294 1 195 306 0 0 chr10 22644334 22644419 -122944869 + T-rich Low_complexity Low_complexity 1 85 0 * 704 86 9 0 chr10 22644399 22644504 -122944784 + (TTCC)n Simple_repeat Simple_repeat 4 109 0 1764 192 13 0 chr10 22644520 22644828 -122944460 - AluJo SINE Alu 0 312 1 1258 123 0 0 chr10 22644840 22645019 -122944269 - AluY SINE Alu -14 297 119 1218 151 5 0 chr10 22645124 22645323 -122943965 + AluSg/x SINE Alu 110 309 -1 180 277 31 31 chr10 22645416 22645481 -122943807 - MIR3 SINE MIR -31 177 113 1021 231 58 0 chr10 22645756 22646033 -122943255 - MER5C DNA MER1_type -2 322 30 270 308 56 0 chr10 22646592 22646699 -122942589 + MIR SINE MIR 89 201 -61 494 339 41 14 chr10 22646848 22647066 -122942222 + MLT1K LTR MaLR 23 246 -342 1726 151 3 56 chr10 22647558 22647707 -122941581 + AluJb SINE Alu 1 127 -185 2181 127 3 0 chr10 22647707 22648006 -122941282 + AluSq SINE Alu 1 300 -13 1726 151 3 56 chr10 22648006 22648161 -122941127 + AluJb SINE Alu 127 289 -23 2307 103 3 3 chr10 22648453 22648755 -122940533 + AluSq SINE Alu 1 302 -11 455 189 26 120 chr10 22648777 22648968 -122940320 - L1MC5 LINE L1 -60 7901 7729 2208 99 14 0 chr10 22648969 22649287 -122940001 - AluSp SINE Alu 0 324 3 1677 199 3 3 chr10 22649287 22649589 -122939699 - AluJo SINE Alu -10 302 1 32 0 0 0 chr10 22649595 22649627 -122939661 + AT_rich Low_complexity Low_complexity 1 32 0 2414 69 0 0 chr10 22649627 22649916 -122939372 - AluY SINE Alu -22 289 1 2165 114 0 0 chr10 22649927 22650216 -122939072 - AluSq SINE Alu -24 289 1 1065 244 31 39 chr10 22650232 22650646 -122938642 - L1MC5 LINE L1 -240 7721 7311 293 287 69 0 chr10 22651918 22652019 -122937269 + L2 LINE L2 3149 3256 -16 921 206 57 0 chr10 22652316 22652510 -122936778 - MLT1D LTR MaLR 0 505 301 1906 162 3 3 chr10 22652580 22652883 -122936405 + AluSp SINE Alu 1 303 -10 1707 162 19 26 chr10 22652919 22653228 -122936060 + AluJo SINE Alu 1 307 -5 497 273 37 51 chr10 22653305 22653521 -122935767 + MLT1J LTR MaLR 64 276 -235 1144 120 0 0 chr10 22653670 22653851 -122935437 - AluJo/FRAM SINE Alu 0 314 134 2231 116 3 0 chr10 22653851 22654154 -122935134 - AluSq SINE Alu -9 304 1 2069 140 59 6 chr10 22654197 22654553 -122934735 + THE1C LTR MaLR 1 375 0 2023 149 3 0 chr10 22654700 22654996 -122934292 - AluSx SINE Alu -15 297 1 1067 143 0 7 chr10 22655375 22655702 -122933586 + AluSx SINE Alu 1 326 0 666 296 33 25 chr10 22656334 22656574 -122932714 - MIR SINE MIR -20 242 1 1032 126 23 11 chr10 22656599 22656773 -122932515 + AluSg/x SINE Alu 120 295 -17 2051 109 3 0 chr10 22656785 22657099 -122932189 + AluSg SINE Alu 1 310 0 803 156 54 0 chr10 22657111 22657278 -122932010 - L1MA8 LINE L1 -12 6279 6104 983 97 6 68 chr10 22657286 22657462 -122931826 + FAM SINE Alu 1 48 -1 295 68 23 0 chr10 22657467 22657522 -122931766 - L1MA8 LINE L1 -189 6102 6044 313 248 201 7 chr10 22657544 22657693 -122931595 - MER104 DNA Tc2 -1 179 2 1531 189 0 16 chr10 22658470 22658782 -122930506 - AluJo SINE Alu -5 307 1 1795 102 8 4 chr10 22658917 22659173 -122930115 - AluSc SINE Alu -12 297 41 396 133 2 0 chr10 22659173 22659244 -122930044 - AluJo/FLAM SINE Alu -169 133 71 456 350 13 27 chr10 22659278 22659578 -122929710 + L2 LINE L2 1985 2280 -1034 237 347 24 29 chr10 22659844 22660014 -122929274 + L2 LINE L2 2737 2905 -409 2135 120 3 0 chr10 22660018 22660350 -122928938 - AluSx SINE Alu 0 312 1 704 186 0 23 chr10 22660797 22660926 -122928362 - FLAM_A SINE Alu -7 126 1 1379 175 35 14 chr10 22661043 22661328 -122927960 + AluJo SINE Alu 1 291 -21 26 0 0 0 chr10 22661341 22661367 -122927921 + AT_rich Low_complexity Low_complexity 1 26 0 257 149 21 0 chr10 22661367 22661414 -122927874 - MLT1B LTR MaLR -342 48 1 1889 146 0 0 chr10 22661497 22661823 -122927465 - AluSx SINE Alu 0 328 3 186 162 0 54 chr10 22662285 22662322 -122926966 + MIR SINE MIR 220 254 -8 712 224 81 6 chr10 22662412 22662586 -122926702 + MIR SINE MIR 3 189 -73 2065 123 12 110 chr10 22662618 22662774 -122926514 + MLT1B LTR MaLR 1 171 -219 2027 119 10 10 chr10 22662774 22663086 -122926202 + AluSx SINE Alu 1 312 0 2065 123 12 110 chr10 22663086 22663358 -122925930 + MLT1B LTR MaLR 171 387 -3 4559 72 14 7 chr10 22663413 22664434 -122924854 - MER11A LTR ERVK 0 1266 1 2086 125 0 0 chr10 22664525 22664820 -122924468 - AluSg SINE Alu -15 295 1 24 32 0 0 chr10 22666019 22666050 -122923238 + AT_rich Low_complexity Low_complexity 1 31 0 1893 137 3 10 chr10 22666258 22666557 -122922731 - AluSx SINE Alu -15 297 1 2098 155 64 50 chr10 22666764 22667108 -122922180 + MSTB LTR MaLR 1 354 -72 2057 119 3 0 chr10 22667108 22667411 -122921877 + AluSx SINE Alu 1 304 -8 2098 155 64 50 chr10 22667411 22667486 -122921802 + MSTB LTR MaLR 354 426 0 567 280 88 53 chr10 22667520 22667964 -122921324 + MLT1J1 LTR MaLR 3 437 -9 935 180 0 116 chr10 22668347 22668580 -122920708 + AluJo SINE Alu 1 206 -106 270 0 0 0 chr10 22668758 22668788 -122920500 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 1968 118 0 4 chr10 22668788 22669068 -122920220 - AluSx SINE Alu -33 279 1 22 41 0 55 chr10 22669217 22669238 -122920050 + AT_rich Low_complexity Low_complexity 1 22 -47 1829 88 0 8 chr10 22669238 22669487 -122919801 - AluSg SINE Alu -26 284 38 22 41 0 55 chr10 22669487 22669504 -122919784 + AT_rich Low_complexity Low_complexity 22 38 -31 949 173 0 24 chr10 22669504 22669672 -122919616 - FAM SINE Alu -11 164 1 22 41 0 55 chr10 22669672 22669705 -122919583 + AT_rich Low_complexity Low_complexity 38 69 0 302 275 60 54 chr10 22669928 22670095 -122919193 - L1MC5 LINE L1 -425 7536 7369 2266 84 3 0 chr10 22670394 22670692 -122918596 - AluSp SINE Alu -14 299 1 776 136 0 8 chr10 22671443 22671561 -122917727 - FRAM SINE Alu -8 168 52 586 188 29 12 chr10 22671598 22671768 -122917520 + CT-rich Low_complexity Low_complexity 1 173 0 240 35 0 0 chr10 22671769 22671798 -122917490 + (TCCC)n Simple_repeat Simple_repeat 3 31 0 530 159 0 167 chr10 22671800 22672106 -122917182 - FLAM_C SINE Alu 0 284 2 1252 227 88 34 chr10 22672321 22672733 -122916555 + MLT1C LTR MaLR 17 451 -16 1625 138 96 0 chr10 22672832 22673092 -122916196 - AluSx SINE Alu -27 285 1 1814 163 0 3 chr10 22673094 22673400 -122915888 - AluJo SINE Alu -7 305 1 2291 78 0 0 chr10 22673413 22673708 -122915580 - AluY SINE Alu -16 295 1 2011 142 0 0 chr10 22673812 22674123 -122915165 - AluSq SINE Alu -2 311 1 1737 173 0 0 chr10 22674489 22674772 -122914516 + AluJo SINE Alu 7 289 -23 26 30 0 0 chr10 22674773 22674806 -122914482 + AT_rich Low_complexity Low_complexity 1 33 0 653 296 84 50 chr10 22674856 22675238 -122914050 + MLT1J2 LTR MaLR 45 439 -11 1833 168 7 3 chr10 22675923 22676232 -122913056 + AluJb SINE Alu 1 310 -2 496 288 19 19 chr10 22676408 22676551 -122912737 - MIR SINE MIR -3 259 114 2324 70 0 7 chr10 22676551 22676851 -122912437 + AluSq SINE Alu 1 298 -15 496 288 19 19 chr10 22676851 22676867 -122912421 - MIR SINE MIR -147 115 100 22 0 0 0 chr10 22676867 22676889 -122912399 + AT_rich Low_complexity Low_complexity 1 22 0 1482 180 63 0 chr10 22676902 22677186 -122912102 + AluJb SINE Alu 4 305 -7 304 271 0 0 chr10 22677216 22677286 -122912002 - MIR SINE MIR -141 121 52 1046 152 0 12 chr10 22677395 22677560 -122911728 + FRAM SINE Alu 4 166 0 472 286 76 12 chr10 22677661 22677832 -122911456 + MIR SINE MIR 80 261 -1 2855 102 7 5 chr10 22678219 22678632 -122910656 + L1PA13 LINE L1 5750 6163 0 1128 189 99 0 chr10 22679473 22679706 -122909582 + AluJb SINE Alu 49 304 -8 2008 120 0 16 chr10 22679708 22680016 -122909272 + AluSq SINE Alu 1 303 -10 279 0 0 0 chr10 22680110 22680141 -122909147 + (T)n Simple_repeat Simple_repeat 1 31 0 372 266 9 126 chr10 22680701 22680784 -122908504 + MER5A DNA MER1_type 1 92 -97 2281 84 3 0 chr10 22680784 22681082 -122908206 + AluSp SINE Alu 1 299 -14 372 266 9 126 chr10 22681082 22681212 -122908076 + MER5A DNA MER1_type 92 189 0 1083 168 0 24 chr10 22681370 22681578 -122907710 - AluSx SINE Alu -12 298 96 844 119 0 0 chr10 22681680 22681798 -122907490 - AluSx SINE Alu -195 118 1 1612 101 0 0 chr10 22681900 22682119 -122907169 + AluSg/x SINE Alu 83 301 -9 371 123 15 0 chr10 22682221 22682286 -122907002 - L1MA9 LINE L1 -3 6309 6244 1441 155 44 44 chr10 22682287 22682584 -122906704 - AluJo SINE Alu -11 301 5 788 158 30 8 chr10 22682586 22682719 -122906569 - AluJo SINE Alu -175 137 2 2143 117 0 0 chr10 22682894 22683201 -122906087 - AluSg SINE Alu -3 307 1 2169 92 0 7 chr10 22683434 22683737 -122905551 - AluSp SINE Alu -12 301 1 1932 129 3 19 chr10 22683880 22684189 -122905099 + AluSx SINE Alu 2 305 -7 2191 95 0 25 chr10 22684230 22684547 -122904741 - AluSx SINE Alu -3 309 1 413 230 105 63 chr10 22684864 22685055 -122904233 + MER34 LTR ERV1 344 542 0 973 172 10 5 chr10 22685177 22685369 -122903919 + AluJo SINE Alu 120 312 0 433 297 36 0 chr10 22685392 22685503 -122903785 + MIR SINE MIR 90 204 -58 2153 98 0 14 chr10 22685503 22685800 -122903488 + AluSx SINE Alu 1 293 -19 280 250 200 8 chr10 22685802 22685922 -122903366 + L2 LINE L2 3171 3313 0 1958 126 3 3 chr10 22686006 22686308 -122902980 - AluJb SINE Alu -10 302 1 1380 212 64 91 chr10 22687545 22688073 -122901215 - LTR9 LTR ERV1 -15 597 84 2069 119 0 7 chr10 22688073 22688368 -122900920 - AluSx SINE Alu -19 293 1 1476 108 0 14 chr10 22688396 22688610 -122900678 - MER4B LTR ERV1 -398 212 2 2876 130 21 9 chr10 22688610 22688943 -122900345 - MER39 LTR ERV1 -263 444 103 3138 191 43 16 chr10 22688943 22689549 -122899739 + LTR26E LTR ERV1 1 622 0 2876 130 21 9 chr10 22689549 22689652 -122899636 - MER39 LTR ERV1 -604 103 3 26 0 0 27 chr10 22690109 22690121 -122899167 + AT_rich Low_complexity Low_complexity 1 12 -24 2140 103 10 0 chr10 22690121 22690413 -122898875 - AluSx SINE Alu -17 295 1 26 0 0 27 chr10 22690413 22690437 -122898851 + AT_rich Low_complexity Low_complexity 12 36 0 858 153 15 0 chr10 22690464 22690595 -122898693 - FLAM_C SINE Alu 0 133 1 1597 151 8 11 chr10 22690652 22690917 -122898371 + AluSx SINE Alu 32 295 -17 1412 214 62 60 chr10 22690989 22691157 -122898131 - MER39 LTR ERV1 -1 706 540 2348 81 0 0 chr10 22691157 22691454 -122897834 - AluSg SINE Alu -13 297 1 1412 214 62 60 chr10 22691454 22691779 -122897509 - MER39 LTR ERV1 -167 540 1 2302 72 0 16 chr10 22692239 22692545 -122896743 + AluSp SINE Alu 1 301 -12 1764 114 53 0 chr10 22692735 22692998 -122896290 + AluSq SINE Alu 23 299 -14 2249 87 6 6 chr10 22693235 22693547 -122895741 + AluSp SINE Alu 1 312 -1 1381 198 39 58 chr10 22693760 22693847 -122895441 + MER4D LTR ERV1 548 635 -268 1824 153 0 6 chr10 22693847 22694160 -122895128 + AluJb SINE Alu 1 311 -1 1381 198 39 58 chr10 22694160 22694435 -122894853 + MER4D LTR ERV1 635 903 0 1156 162 83 42 chr10 22694457 22694485 -122894803 + LTR8 LTR ERV1 14 39 -652 2499 62 0 0 chr10 22694485 22694793 -122894495 + AluY SINE Alu 1 308 -3 1156 162 83 42 chr10 22694793 22695033 -122894255 + LTR8 LTR ERV1 39 276 -415 315 0 0 0 chr10 22696052 22696087 -122893201 + (A)n Simple_repeat Simple_repeat 1 35 0 1580 205 42 46 chr10 22696097 22696537 -122892751 + LTR8 LTR ERV1 293 727 0 2144 73 0 3 chr10 22696587 22696873 -122892415 - AluY SINE Alu -3 308 24 1653 138 29 11 chr10 22697042 22697180 -122892108 + AluSg SINE Alu 3 137 -173 2067 104 0 16 chr10 22697180 22697489 -122891799 + AluSg SINE Alu 1 304 -6 1653 138 29 11 chr10 22697489 22697626 -122891662 + AluSg SINE Alu 137 283 -27 965 211 146 39 chr10 22697698 22697978 -122891310 + HsTC2 DNA Tc2 1 310 -1588 712 215 43 5 chr10 22697984 22698170 -122891118 + HsTC2 DNA Tc2 1706 1898 0 387 292 88 15 chr10 22698603 22698740 -122890548 - L2 LINE L2 -1 3271 3125 1408 186 23 107 chr10 22698767 22699160 -122890128 - MLT1A1 LTR MaLR -5 360 1 576 208 21 21 chr10 22699235 22699379 -122889909 - LTR33 LTR ERVL -4 517 374 1604 189 0 19 chr10 22699532 22699849 -122889439 - AluJo SINE Alu 0 312 2 492 265 149 60 chr10 22699965 22700171 -122889117 + MLT1J LTR MaLR 8 251 -260 1548 186 25 3 chr10 22700171 22700456 -122888832 - AluJo SINE Alu -21 291 1 492 265 149 60 chr10 22700456 22700551 -122888737 + MLT1J LTR MaLR 251 336 -175 269 146 49 61 chr10 22700581 22700663 -122888625 + MLT1J1 LTR MaLR 366 446 0 457 128 186 0 chr10 22700829 22700931 -122888357 + FLAM_A SINE Alu 22 142 0 321 310 62 7 chr10 22701197 22701342 -122887946 + MIR SINE MIR 76 228 -34 2096 117 3 0 chr10 22701743 22702043 -122887245 + AluSp SINE Alu 1 301 -12 1648 171 0 10 chr10 22702104 22702396 -122886892 - AluJo SINE Alu -23 289 1 729 169 32 32 chr10 22702396 22702535 -122886753 + MER57A LTR ERV1 246 387 -16 1579 174 33 10 chr10 22702535 22702840 -122886448 - AluJb SINE Alu 0 312 1 729 169 32 32 chr10 22702840 22702854 -122886434 + MER57A LTR ERV1 386 399 -4 1431 235 91 52 chr10 22702892 22703377 -122885911 + MLT1H LTR MaLR 46 549 0 4751 144 66 4 chr10 22703462 22704240 -122885048 + LTR1B LTR ERV1 1 826 0 359 176 49 92 chr10 22705103 22705214 -122884074 - L1ME4a LINE L1 -38 6083 5978 1664 167 24 0 chr10 22705214 22705501 -122883787 - AluJo SINE Alu -18 294 1 359 176 49 92 chr10 22705501 22705531 -122883757 - L1ME4a LINE L1 -143 5978 5948 2180 99 38 0 chr10 22705816 22706108 -122883180 + AluSx SINE Alu 1 303 -9 32 67 0 0 chr10 22706765 22706825 -122882463 + AT_rich Low_complexity Low_complexity 1 60 0 765 167 8 8 chr10 22706955 22707087 -122882201 + FLAM_C SINE Alu 1 132 -1 445 286 40 107 chr10 22707317 22707434 -122881854 + MIR SINE MIR 10 133 -129 1035 103 0 27 chr10 22707434 22707619 -122881669 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 1356 158 150 4 chr10 22707619 22707866 -122881422 - AluJo SINE Alu -19 283 1 445 286 40 107 chr10 22707866 22707999 -122881289 + MIR SINE MIR 131 244 -18 241 95 0 0 chr10 22708033 22708075 -122881213 - Alu SINE Alu 0 300 259 690 79 30 0 chr10 22708075 22708176 -122881112 + AluSp/q SINE Alu 205 308 -5 215 288 0 0 chr10 22708462 22708521 -122880767 + MIR SINE MIR 74 132 -130 28 48 0 0 chr10 22708894 22708936 -122880352 + AT_rich Low_complexity Low_complexity 1 42 0 1886 155 7 7 chr10 22709637 22709940 -122879348 + AluJb SINE Alu 1 303 -9 874 291 83 32 chr10 22709949 22710323 -122878965 + MER34 LTR ERV1 1 393 -149 1061 146 0 11 chr10 22710323 22710501 -122878787 - AluSg/x SINE Alu 0 310 135 315 143 0 0 chr10 22710502 22710551 -122878737 + MER39 LTR ERV1 555 603 -104 1435 149 9 9 chr10 22710553 22710775 -122878513 + AluSc SINE Alu 2 223 -86 919 131 0 0 chr10 22710992 22711122 -122878166 - AluSg/x SINE Alu -26 286 157 508 133 95 139 chr10 22711143 22711194 -122878094 + MER39 LTR ERV1 555 607 -100 1995 132 0 4 chr10 22711194 22711500 -122877788 + AluY SINE Alu 2 306 0 508 133 95 139 chr10 22711500 22711603 -122877685 + MER39 LTR ERV1 607 705 -2 2005 166 0 0 chr10 22711659 22711961 -122877327 - AluJo SINE Alu -10 302 1 2190 112 3 0 chr10 22711986 22712281 -122877007 - AluY SINE Alu -15 296 1 1835 157 31 3 chr10 22712283 22712576 -122876712 - AluJo SINE Alu -11 301 1 209 33 33 0 chr10 22713334 22713364 -122875924 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1431 191 60 4 chr10 22713367 22713634 -122875654 - AluJb SINE Alu -30 282 1 2582 77 0 0 chr10 22714003 22714314 -122874974 + AluSx SINE Alu 1 311 -1 2396 94 0 0 chr10 22714487 22714794 -122874494 + AluSg SINE Alu 1 307 -3 2401 80 7 0 chr10 22714954 22715253 -122874035 - AluSq SINE Alu -12 301 1 1332 129 36 13 chr10 22715464 22715688 -122873600 + LTR39 LTR ERV1 1 229 -554 2162 123 3 0 chr10 22715688 22715990 -122873298 - AluSx SINE Alu -9 303 1 965 201 63 0 chr10 22715990 22716164 -122873124 + LTR39 LTR ERV1 599 783 0 2294 97 0 10 chr10 22716422 22716732 -122872556 + AluSx SINE Alu 1 307 -5 2122 139 0 3 chr10 22716800 22717101 -122872187 + AluSq SINE Alu 1 300 -13 32 26 0 0 chr10 22717116 22717155 -122872133 + AT_rich Low_complexity Low_complexity 1 39 0 2315 100 0 0 chr10 22718640 22718940 -122870348 + AluSc SINE Alu 1 300 -9 433 178 0 0 chr10 22719161 22719234 -122870054 - MLT1A1 LTR MaLR 0 365 293 2300 103 7 3 chr10 22719251 22719561 -122869727 - AluSx SINE Alu -1 311 1 1539 202 17 10 chr10 22719567 22719859 -122869429 - AluJb SINE Alu -18 294 1 1588 215 6 3 chr10 22719862 22720173 -122869115 - AluJo SINE Alu 0 312 1 1975 140 0 29 chr10 22720173 22720487 -122868801 - MLT1A1 LTR MaLR -60 305 1 1049 156 0 23 chr10 22720558 22720731 -122868557 + FRAM SINE Alu 1 168 -8 945 242 139 26 chr10 22720777 22721165 -122868123 - LTR16A LTR ERVL 0 450 19 208 303 90 41 chr10 22721639 22721761 -122867527 + L2 LINE L2 3133 3260 -12 1780 137 113 18 chr10 22721764 22722100 -122867188 + LTR29 LTR ERV1 1 303 -319 1615 246 43 66 chr10 22722100 22722725 -122866563 - LTR9 LTR ERV1 0 612 2 1780 137 113 18 chr10 22722725 22722927 -122866361 + LTR29 LTR ERV1 303 622 0 3778 134 8 31 chr10 22723037 22723353 -122865935 - MER4D LTR ERV1 -9 894 572 2144 87 50 4 chr10 22723353 22723630 -122865658 + AluSg SINE Alu 1 290 -20 3778 134 8 31 chr10 22723630 22723911 -122865377 - MER4D LTR ERV1 -331 572 309 2169 141 3 0 chr10 22723911 22724223 -122865065 + AluSq SINE Alu 1 313 0 3778 134 8 31 chr10 22724223 22724241 -122865047 - MER4D LTR ERV1 -594 309 292 496 265 123 12 chr10 22724248 22724410 -122864878 + LTR1 LTR ERV1 38 217 -568 598 189 32 41 chr10 22724468 22724651 -122864637 + LTR1B LTR ERV1 343 493 -333 268 213 27 153 chr10 22724660 22724810 -122864478 + LTR28 LTR ERV1 848 978 -42 2110 127 9 9 chr10 22724858 22725173 -122864115 - MER4D LTR ERV1 -557 315 1 1424 115 91 12 chr10 22725753 22726006 -122863282 + MER34C LTR ERV1 5 277 -308 1020 212 106 106 chr10 22726070 22726627 -122862661 - LTR1B LTR ERV1 -237 589 33 1671 151 45 10 chr10 22726700 22726992 -122862296 + MER34C LTR ERV1 252 553 -32 228 200 0 0 chr10 22726992 22727027 -122862261 + MER34C LTR ERV1 1 35 -550 * 656 177 130 95 chr10 22726996 22727265 -122862023 + MER39 LTR ERV1 5 263 -390 2370 95 13 0 chr10 22727265 22727569 -122861719 - AluSx SINE Alu -4 308 1 656 177 130 95 chr10 22727569 22727582 -122861706 + MER39 LTR ERV1 263 274 -379 2704 173 25 42 chr10 22727582 22727814 -122861474 + MER87 LTR ERV1 1 235 -306 2210 110 0 7 chr10 22727814 22728113 -122861175 + AluSp SINE Alu 1 297 -16 2704 173 25 42 chr10 22728113 22728287 -122861001 + MER87 LTR ERV1 235 398 -143 2156 128 3 0 chr10 22728287 22728584 -122860704 - AluSx SINE Alu -14 298 1 2704 173 25 42 chr10 22728584 22728726 -122860562 + MER87 LTR ERV1 398 541 0 656 177 130 95 chr10 22728726 22728742 -122860546 + MER39 LTR ERV1 274 461 -192 3759 169 49 24 chr10 22728742 22729489 -122859799 - LTR1B LTR ERV1 0 785 1 891 151 32 91 chr10 22729489 22729530 -122859758 + MER39 LTR ERV1 502 544 -163 1170 150 6 0 chr10 22729530 22729703 -122859585 + FAM SINE Alu 1 174 -1 891 151 32 91 chr10 22729703 22729771 -122859517 + MER39 LTR ERV1 544 614 -93 1868 118 89 4 chr10 22729771 22730042 -122859246 + AluSq SINE Alu 1 294 -19 891 151 32 91 chr10 22730042 22730150 -122859138 + MER39 LTR ERV1 614 707 0 2056 160 18 18 chr10 22730199 22730432 -122858856 - MER1B DNA MER1_type -2373 339 104 2097 122 34 71 chr10 22730432 22730810 -122858478 - THE1B LTR MaLR 0 364 1 2056 160 18 18 chr10 22730810 22730913 -122858375 - MER1B DNA MER1_type -2607 105 3 2118 138 0 19 chr10 22731480 22731798 -122857490 + AluSx SINE Alu 1 312 0 454 214 79 43 chr10 22732035 22732175 -122857113 - L1ME LINE L1 -616 5505 5361 924 142 25 19 chr10 22732618 22732780 -122856508 - Tigger7 DNA MER2_type 0 2487 2325 1923 95 3 79 chr10 22732798 22733103 -122856185 + AluSx SINE Alu 11 292 -20 5972 39 1 16 chr10 22733203 22733898 -122855390 + SVA Other Other 702 1386 0 508 212 93 8 chr10 22734092 22734210 -122855078 - FLAM_C SINE Alu -1 132 5 1581 150 43 8 chr10 22734218 22734544 -122854744 - AluJb SINE Alu 0 355 21 4366 103 36 6 chr10 22734567 22735205 -122854083 - MER4D LTR ERV1 -246 657 1 949 114 29 7 chr10 22735211 22735351 -122853937 - MER39 LTR ERV1 -269 438 296 867 250 22 14 chr10 22735784 22736018 -122853270 + LTR48 LTR ERV1 11 214 -430 973 121 0 7 chr10 22736042 22736183 -122853105 + FLAM_C SINE Alu 1 140 -3 1895 175 145 30 chr10 22736185 22736689 -122852599 + LTR48 LTR ERV1 226 787 0 2157 119 3 7 chr10 22737006 22737316 -122851972 + AluSx SINE Alu 1 309 -3 393 198 121 36 chr10 22737321 22737437 -122851851 + MIR SINE MIR 30 154 -62 1923 136 0 29 chr10 22738469 22738778 -122850510 + AluJo SINE Alu 1 300 -12 2942 146 14 93 chr10 22738800 22739425 -122849863 - MER6A DNA MER2_type -260 605 33 2123 127 0 7 chr10 22739425 22739725 -122849563 + AluSq SINE Alu 1 298 -15 2942 146 14 93 chr10 22739725 22739755 -122849533 - MER6A DNA MER2_type -832 33 2 1840 162 7 3 chr10 22740177 22740480 -122848808 - AluJo SINE Alu -8 304 1 225 31 62 0 chr10 22740602 22740634 -122848654 - AluY SINE Alu -267 34 1 1532 163 4 4 chr10 22740753 22740993 -122848295 + AluJo SINE Alu 40 279 -33 333 0 0 0 chr10 22740994 22741031 -122848257 + (TAAA)n Simple_repeat Simple_repeat 1 37 0 475 269 82 0 chr10 22741058 22741229 -122848059 + MIR SINE MIR 12 196 -66 1148 137 75 156 chr10 22741529 22741836 -122847452 - AluJo SINE Alu -18 284 3 1828 119 56 0 chr10 22741847 22742152 -122847136 - AluSx SINE Alu 0 321 2 2226 121 0 6 chr10 22742521 22742834 -122846454 - AluSq SINE Alu -2 311 1 422 186 153 0 chr10 22742869 22742993 -122846295 + L1ME4a LINE L1 5979 6121 0 1826 167 6 16 chr10 22743010 22743321 -122845967 + AluJb SINE Alu 5 312 0 792 204 0 0 chr10 22743346 22743478 -122845810 + FLAM_A SINE Alu 1 132 -1 2276 99 7 3 chr10 22743613 22743916 -122845372 - AluSq SINE Alu -7 306 3 439 239 78 14 chr10 22744391 22744419 -122844869 - MER5A DNA MER1_type 0 189 164 1768 162 3 31 chr10 22744419 22744740 -122844548 - AluJo SINE Alu 0 312 1 439 239 78 14 chr10 22744740 22744853 -122844435 - MER5A DNA MER1_type -25 164 39 806 171 0 0 chr10 22744881 22745004 -122844284 + FLAM_C SINE Alu 1 123 -20 1640 176 28 3 chr10 22745022 22745138 -122844150 + AluJb SINE Alu 1 113 -199 200 86 29 0 chr10 22745138 22745173 -122844115 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 1640 176 28 3 chr10 22745173 22745340 -122843948 + AluJb SINE Alu 113 291 -21 279 303 11 22 chr10 22745341 22745430 -122843858 - MER5B DNA MER1_type -30 148 61 1712 75 13 0 chr10 22745503 22745729 -122843559 - L1PA10 LINE L1 -1 6167 5939 1827 169 7 10 chr10 22745946 22746241 -122843047 + AluJo SINE Alu 6 299 -13 1758 180 0 27 chr10 22746241 22746380 -122842908 + AluSx SINE Alu 2 143 -169 2215 110 3 0 chr10 22746380 22746672 -122842616 + AluSp SINE Alu 1 293 -20 1758 180 0 27 chr10 22746672 22746826 -122842462 + AluSx SINE Alu 143 287 -25 23 78 0 0 chr10 22746828 22746879 -122842409 + AT_rich Low_complexity Low_complexity 1 51 0 825 140 0 0 chr10 22746922 22747036 -122842252 + FLAM_C SINE Alu 11 124 -19 2582 146 21 5 chr10 22747060 22747479 -122841809 + MSTA LTR MaLR 3 428 0 1245 181 0 0 chr10 22748489 22748688 -122840600 + AluJb SINE Alu 86 284 -28 2133 118 0 7 chr10 22748706 22749038 -122840250 - AluSx SINE Alu 0 330 1 257 259 62 0 chr10 22749182 22749263 -122840025 - L2 LINE L2 -1 3312 3227 540 280 50 61 chr10 22749291 22749424 -122839864 + Charlie8 DNA MER1_type 1 131 -210 2295 97 3 0 chr10 22749424 22749723 -122839565 + AluSg SINE Alu 2 301 -9 540 280 50 61 chr10 22749723 22749850 -122839438 + Charlie8 DNA MER1_type 131 258 -83 183 156 0 0 chr10 22751049 22751081 -122838207 + (TA)n Simple_repeat Simple_repeat 2 33 0 194 222 0 22 chr10 22751191 22751236 -122838052 + MIR SINE MIR 97 140 -68 2082 164 0 0 chr10 22751246 22751558 -122837730 + AluJb SINE Alu 1 312 0 2205 105 7 3 chr10 22751558 22751863 -122837425 + AluSc SINE Alu 1 306 -3 490 315 63 57 chr10 22752160 22752606 -122836682 + L1MEd LINE L1 323 774 -5345 2442 81 3 0 chr10 22752606 22752904 -122836384 + AluSp SINE Alu 2 300 -13 490 315 63 57 chr10 22752904 22753016 -122836272 + L1MEd LINE L1 774 884 -5235 492 239 60 0 chr10 22753041 22753158 -122836130 - L2 LINE L2 -19 3294 3171 24 67 0 0 chr10 22753261 22753306 -122835982 + AT_rich Low_complexity Low_complexity 1 45 0 2172 104 3 10 chr10 22753746 22754044 -122835244 - AluSc SINE Alu -13 296 1 2155 110 0 26 chr10 22754044 22754352 -122834936 - AluSx SINE Alu -12 300 1 849 79 0 9 chr10 22754352 22754466 -122834822 - MER41B LTR ERV1 -477 158 46 2179 121 0 0 chr10 22754713 22755020 -122834268 + AluSx SINE Alu 1 307 -5 2207 100 0 39 chr10 22755617 22755928 -122833360 - AluSg1 SINE Alu -8 301 3 22 0 0 0 chr10 22755934 22755956 -122833332 + AT_rich Low_complexity Low_complexity 1 22 0 247 226 48 0 chr10 22755989 22756051 -122833237 - L2 LINE L2 0 3272 3208 22 0 0 0 chr10 22756476 22756498 -122832790 + AT_rich Low_complexity Low_complexity 1 22 0 1882 153 11 3 chr10 22756531 22756818 -122832470 + AluSx SINE Alu 1 289 -23 1976 154 7 0 chr10 22758053 22758346 -122830942 - AluJb SINE Alu -17 295 1 1661 197 20 0 chr10 22759009 22759313 -122829975 - AluJo SINE Alu -2 310 1 291 218 23 11 chr10 22759381 22759468 -122829820 - LTR33 LTR ERVL -3 518 431 1088 196 3 107 chr10 22759468 22759759 -122829529 - MLT1B LTR MaLR 0 390 130 999 193 0 0 chr10 22759759 22759920 -122829368 - FRAM SINE Alu -15 161 1 787 156 0 21 chr10 22759921 22760062 -122829226 - MLT1B LTR MaLR -252 138 1 2133 125 7 0 chr10 22760062 22760365 -122828923 + AluSx SINE Alu 1 305 -7 336 295 9 0 chr10 22760366 22760471 -122828817 - LTR33 LTR ERVL -85 436 331 606 172 52 0 chr10 22760493 22760609 -122828679 + FRAM SINE Alu 55 176 0 2170 100 41 0 chr10 22760612 22760903 -122828385 + AluSg SINE Alu 1 303 -7 2337 122 3 0 chr10 22761734 22762045 -122827243 + AluSx SINE Alu 1 312 0 2346 77 0 3 chr10 22762157 22762442 -122826846 + AluSc SINE Alu 10 293 -16 847 157 0 8 chr10 22762630 22762764 -122826524 + FLAM_C SINE Alu 1 133 0 2345 81 0 3 chr10 22762826 22763123 -122826165 - AluY SINE Alu -10 301 6 282 29 0 0 chr10 22763139 22763174 -122826114 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2347 71 0 4 chr10 22763177 22763458 -122825830 - AluSq SINE Alu -33 280 1 2129 135 0 3 chr10 22763459 22763789 -122825499 - AluSx SINE Alu 0 312 1 268 197 0 0 chr10 22764126 22764187 -122825101 + L1MB4 LINE L1 6120 6180 0 2441 93 0 0 chr10 22764548 22764859 -122824429 + AluY SINE Alu 1 311 0 2487 90 0 0 chr10 22764877 22765176 -122824112 + AluSg SINE Alu 1 299 -11 1962 147 3 17 chr10 22765180 22765479 -122823809 + AluSx SINE Alu 1 295 -17 377 333 38 0 chr10 22765548 22765680 -122823608 - L2 LINE L2 -2 3270 3134 2314 84 0 23 chr10 22765824 22766133 -122823155 - AluSc SINE Alu -7 302 1 2137 136 0 16 chr10 22766692 22767001 -122822287 + AluSx SINE Alu 1 304 -8 1075 158 0 0 chr10 22767214 22767379 -122821909 + AluSg/x SINE Alu 135 299 -11 2066 113 0 63 chr10 22767624 22767943 -122821345 + AluSg SINE Alu 8 306 -4 1083 113 0 108 chr10 22767954 22768139 -122821149 + AluJb SINE Alu 136 300 -12 401 341 14 0 chr10 22768146 22768284 -122821004 + L1MC4a LINE L1 5538 5677 -2131 400 266 23 62 chr10 22768300 22768477 -122820811 + L1MC4a LINE L1 5764 5933 -1875 2173 130 0 0 chr10 22768573 22768874 -122820414 + AluSx SINE Alu 12 312 0 677 240 0 0 chr10 22769008 22769137 -122820151 + FLAM_A SINE Alu 1 129 -4 1646 97 0 0 chr10 22769174 22769381 -122819907 + AluSc SINE Alu 82 288 -21 2505 64 0 0 chr10 22769401 22769699 -122819589 + AluY SINE Alu 1 298 -13 604 146 0 0 chr10 22769744 22769833 -122819455 - AluSg/x SINE Alu -21 288 200 499 269 15 23 chr10 22770027 22770157 -122819131 + FLAM_A SINE Alu 1 129 -4 1646 97 0 0 chr10 22770197 22770404 -122818884 + AluSc SINE Alu 82 288 -21 2505 64 0 0 chr10 22770424 22770722 -122818566 + AluY SINE Alu 1 298 -13 2149 114 0 0 chr10 22770767 22771047 -122818241 - AluSx SINE Alu -21 291 12 1797 183 3 7 chr10 22771525 22771820 -122817468 + AluJo SINE Alu 1 294 -18 2064 142 0 26 chr10 22772191 22772501 -122816787 + AluSx SINE Alu 1 302 -10 1716 115 0 0 chr10 22772627 22772853 -122816435 - AluSg/x SINE Alu -4 305 80 1961 126 19 0 chr10 22772948 22773217 -122816071 + AluSx SINE Alu 23 296 -16 2379 162 25 32 chr10 22773464 22773855 -122815433 + MSTA LTR MaLR 1 390 -38 2135 123 26 0 chr10 22773855 22774157 -122815131 - AluSx SINE Alu -1 311 2 2379 162 25 32 chr10 22774157 22774196 -122815092 + MSTA LTR MaLR 390 428 0 2021 128 12 40 chr10 22774388 22774709 -122814579 - AluSx SINE Alu 0 312 1 180 111 0 0 chr10 22774718 22774745 -122814543 + (TA)n Simple_repeat Simple_repeat 1 27 0 1955 136 10 10 chr10 22774745 22775030 -122814258 - AluSx SINE Alu -24 288 1 2232 132 0 3 chr10 22775042 22775353 -122813935 - AluSg SINE Alu 0 310 1 1947 169 0 0 chr10 22775418 22775719 -122813569 - AluJb SINE Alu -11 301 1 4717 160 34 21 chr10 22775719 22776390 -122812898 + Charlie1 DNA MER1_type 1780 2469 -292 2574 77 3 0 chr10 22776390 22776701 -122812587 - AluSp SINE Alu -1 312 1 4717 160 34 21 chr10 22776701 22776998 -122812290 + Charlie1 DNA MER1_type 2469 2761 0 2389 94 3 0 chr10 22777668 22777966 -122811322 + AluSg SINE Alu 1 299 -11 868 159 0 0 chr10 22778126 22778258 -122811030 + FLAM_C SINE Alu 1 132 -1 30 0 0 0 chr10 22778406 22778436 -122810852 + AT_rich Low_complexity Low_complexity 1 30 0 1269 111 28 0 chr10 22778472 22778652 -122810636 - AluSx SINE Alu -1 311 127 911 123 46 0 chr10 22778755 22778885 -122810403 - AluSx SINE Alu -177 136 1 548 203 36 7 chr10 22778894 22779032 -122810256 - MLT1J2 LTR MaLR -308 142 1 2129 95 0 0 chr10 22779068 22779332 -122809956 + AluSx SINE Alu 1 264 -48 398 322 21 73 chr10 22779354 22779587 -122809701 - L2 LINE L2 -432 2882 2662 760 167 7 43 chr10 22779587 22779725 -122809563 + FLAM_C SINE Alu 1 133 0 2357 96 0 0 chr10 22779800 22780093 -122809195 - AluSg SINE Alu -17 293 1 192 340 124 10 chr10 22780111 22780305 -122808983 - L2 LINE L2 -952 2362 2147 416 283 9 0 chr10 22780380 22780486 -122808802 + MER63A DNA MER1_type 104 210 0 2364 72 7 10 chr10 22780540 22780845 -122808443 + AluY SINE Alu 1 304 -7 1253 111 0 28 chr10 22780845 22781026 -122808262 + AluSg/x SINE Alu 134 309 -3 242 352 11 80 chr10 22781093 22781155 -122808133 - L2 LINE L2 -1357 1957 1892 1761 144 10 40 chr10 22781155 22781453 -122807835 - AluJb SINE Alu -14 298 10 242 352 11 80 chr10 22781453 22781566 -122807722 - L2 LINE L2 -1422 1892 1794 353 169 56 0 chr10 22781566 22781655 -122807633 + AluJ/FLAM SINE Alu 2 95 -207 23 33 0 0 chr10 22781778 22781808 -122807480 + AT_rich Low_complexity Low_complexity 1 30 0 1043 172 0 6 chr10 22781843 22782012 -122807276 + AluSg/x SINE Alu 124 291 -19 292 234 0 0 chr10 22782012 22782076 -122807212 + U3 snRNA snRNA 3 66 -151 868 154 0 0 chr10 22782144 22782267 -122807021 - FLAM_A SINE Alu -10 123 1 1659 160 25 7 chr10 22782391 22782673 -122806615 + AluJb SINE Alu 18 304 -8 516 322 109 22 chr10 22782701 22782968 -122806320 + L2 LINE L2 3016 3305 -8 2240 123 7 0 chr10 22782982 22783291 -122805997 + AluSx SINE Alu 1 311 -1 2206 101 31 0 chr10 22783415 22783703 -122805585 - AluSq SINE Alu -15 298 2 1864 119 20 0 chr10 22783752 22784004 -122805284 - AluSx SINE Alu -55 257 1 857 216 267 26 chr10 22784044 22784460 -122804828 - MLT1H LTR MaLR -9 540 25 1357 215 9 87 chr10 22784576 22784911 -122804377 + AluJo SINE Alu 1 309 -3 1576 148 3 77 chr10 22785499 22785810 -122803478 - AluJb SINE Alu -14 298 11 23 0 0 0 chr10 22786237 22786260 -122803028 + AT_rich Low_complexity Low_complexity 1 23 0 914 192 0 13 chr10 22786316 22786472 -122802816 - FRAM SINE Alu -11 165 12 21 0 0 0 chr10 22787474 22787495 -122801793 + AT_rich Low_complexity Low_complexity 1 21 0 2327 101 0 7 chr10 22788309 22788607 -122800681 + AluSg SINE Alu 1 296 -14 22 35 0 0 chr10 22789353 22789382 -122799906 + AT_rich Low_complexity Low_complexity 1 29 0 2210 110 7 13 chr10 22790072 22790382 -122798906 + AluSg SINE Alu 1 308 -2 301 241 0 25 chr10 22798652 22798731 -122790557 + GA-rich Low_complexity Low_complexity 3 79 0 2399 83 3 10 chr10 22801678 22801992 -122787296 - AluSx SINE Alu 0 312 1 21 36 0 0 chr10 22802634 22802662 -122786626 + AT_rich Low_complexity Low_complexity 1 28 0 195 42 0 0 chr10 22803660 22803684 -122785604 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 185 228 140 18 chr10 22804386 22804443 -122784845 - L2 LINE L2 0 3272 3209 441 0 0 0 chr10 22805551 22805600 -122783688 + (TG)n Simple_repeat Simple_repeat 2 50 0 211 213 27 0 chr10 22805601 22805676 -122783612 + GA-rich Low_complexity Low_complexity 2 78 0 26 50 0 0 chr10 22806981 22807021 -122782267 + GC_rich Low_complexity Low_complexity 1 40 0 29 60 0 0 chr10 22807471 22807521 -122781767 + GC_rich Low_complexity Low_complexity 1 50 0 279 0 0 0 chr10 22807782 22807813 -122781475 + (T)n Simple_repeat Simple_repeat 1 31 0 24 0 0 0 chr10 22808193 22808217 -122781071 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr10 22808632 22808653 -122780635 + AT_rich Low_complexity Low_complexity 1 21 0 2471 78 7 0 chr10 22810963 22811269 -122778019 + AluSx SINE Alu 3 310 -2 390 91 0 0 chr10 22813563 22813618 -122775670 + (TCC)n Simple_repeat Simple_repeat 2 56 0 393 22 0 0 chr10 22813797 22813843 -122775445 + (TGG)n Simple_repeat Simple_repeat 2 47 0 22 0 0 0 chr10 22818754 22818776 -122770512 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr10 22821027 22821058 -122768230 + GC_rich Low_complexity Low_complexity 1 31 0 208 121 0 0 chr10 22821082 22821115 -122768173 + (GGGGA)n Simple_repeat Simple_repeat 2 34 0 37 0 0 0 chr10 22822136 22822173 -122767115 + GC_rich Low_complexity Low_complexity 1 37 0 252 189 19 0 chr10 22825407 22825460 -122763828 - L2 LINE L2 -7 3265 3212 315 0 0 0 chr10 22826762 22826797 -122762491 + (TA)n Simple_repeat Simple_repeat 2 36 0 323 296 12 0 chr10 22826820 22826901 -122762387 + L2 LINE L2 3230 3311 -2 24 0 0 0 chr10 22827630 22827654 -122761634 + AT_rich Low_complexity Low_complexity 1 24 0 1669 199 3 3 chr10 22827880 22828171 -122761117 - AluJb SINE Alu -21 291 1 22 0 0 0 chr10 22828298 22828320 -122760968 + AT_rich Low_complexity Low_complexity 1 22 0 637 173 73 0 chr10 22828324 22828434 -122760854 + FLAM_C SINE Alu 1 118 -15 2329 93 0 16 chr10 22828448 22828760 -122760528 + AluY SINE Alu 1 307 -4 813 164 0 23 chr10 22828760 22828888 -122760400 - AluJo/FLAM SINE Alu -177 125 1 1908 131 0 0 chr10 22829215 22829475 -122759813 + AluSq SINE Alu 1 260 -53 200 33 0 33 chr10 22829484 22829514 -122759774 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2125 126 14 0 chr10 22829565 22829859 -122759429 + AluSx SINE Alu 1 298 -14 3061 145 32 21 chr10 22829860 22830424 -122758864 + L1MB3 LINE L1 5604 6173 -10 2031 129 0 14 chr10 22830425 22830719 -122758569 - AluSx SINE Alu -22 290 1 32 43 0 0 chr10 22830777 22830823 -122758465 + AT_rich Low_complexity Low_complexity 1 46 0 2239 101 24 7 chr10 22830952 22831248 -122758040 - AluSq SINE Alu -12 301 1 792 270 69 13 chr10 22831339 22831572 -122757716 + MLT2E LTR ERVL 8 253 -375 624 272 13 64 chr10 22831613 22831758 -122757530 + MLT2E LTR ERVL 338 468 -160 1740 163 7 17 chr10 22831758 22832058 -122757230 - AluJo SINE Alu -13 299 3 624 272 13 64 chr10 22832058 22832147 -122757141 + MLT2E LTR ERVL 468 560 -68 819 189 6 24 chr10 22832162 22832331 -122756957 - AluJo SINE Alu -74 238 73 1612 173 69 7 chr10 22832960 22833249 -122756039 + AluJb SINE Alu 5 311 -1 2174 115 3 7 chr10 22833257 22833561 -122755727 + AluSg1 SINE Alu 1 303 -6 680 229 0 0 chr10 22833825 22833956 -122755332 + AluJo/FLAM SINE Alu 1 131 -171 2224 133 0 0 chr10 22833959 22834260 -122755028 + AluSq SINE Alu 2 302 -11 1761 162 7 14 chr10 22834284 22834568 -122754720 + AluJb SINE Alu 1 282 -30 759 91 0 0 chr10 22834594 22834693 -122754595 + HY3 scRNA scRNA 1 99 -2 2095 119 6 13 chr10 22835694 22836005 -122753283 - AluSx SINE Alu -3 309 1 1508 175 27 38 chr10 22836350 22836554 -122752734 - AluJb SINE Alu -23 289 87 2140 111 3 13 chr10 22836554 22836852 -122752436 - AluSp SINE Alu -18 295 1 1508 175 27 38 chr10 22836852 22836939 -122752349 - AluJb SINE Alu -225 87 1 1141 138 6 0 chr10 22837054 22837228 -122752060 - AluSg/x SINE Alu -4 308 134 2264 102 0 13 chr10 22837228 22837533 -122751755 - AluSq SINE Alu -12 301 1 1603 168 45 41 chr10 22837772 22837919 -122751369 - AluJb SINE Alu -19 293 148 2366 91 7 10 chr10 22837919 22838227 -122751061 - AluSp SINE Alu -6 307 1 1603 168 45 41 chr10 22838227 22838371 -122750917 - AluJb SINE Alu -164 148 1 180 0 0 0 chr10 22839177 22839197 -122750091 + (T)n Simple_repeat Simple_repeat 1 20 0 2103 122 17 0 chr10 22839257 22839552 -122749736 + AluSq SINE Alu 2 301 -12 1211 119 28 0 chr10 22839553 22839730 -122749558 + AluSg/x SINE Alu 126 307 -5 1570 135 82 50 chr10 22839737 22839873 -122749415 + AluJb SINE Alu 1 131 -181 1865 148 13 17 chr10 22839873 22840171 -122749117 + AluSx SINE Alu 1 297 -15 1570 135 82 50 chr10 22840171 22840315 -122748973 + AluJb SINE Alu 131 290 -22 26 50 0 0 chr10 22840444 22840484 -122748804 + AT_rich Low_complexity Low_complexity 1 40 0 1792 167 3 3 chr10 22840642 22840941 -122748347 + AluSx SINE Alu 1 299 -13 1554 168 21 10 chr10 22840991 22841153 -122748135 - AluJo SINE Alu -18 294 126 2163 107 7 7 chr10 22841153 22841451 -122747837 - AluSx SINE Alu -14 298 1 1554 168 21 10 chr10 22841451 22841579 -122747709 - AluJo SINE Alu -186 126 1 2107 118 7 3 chr10 22842052 22842341 -122746947 + AluSq SINE Alu 1 290 -23 1328 209 17 50 chr10 22842360 22842661 -122746627 + AluJo SINE Alu 2 292 -20 1214 93 43 0 chr10 22842721 22842883 -122746405 - AluSg/x SINE Alu -9 303 135 2284 116 0 0 chr10 22842884 22843186 -122746102 - AluSp SINE Alu -11 302 1 32 0 0 0 chr10 22843219 22843251 -122746037 + AT_rich Low_complexity Low_complexity 1 32 0 2132 120 0 3 chr10 22843252 22843544 -122745744 - AluSp SINE Alu -22 291 1 326 305 61 8 chr10 22843768 22843899 -122745389 - MIR SINE MIR -3 259 122 2352 88 3 0 chr10 22844629 22844923 -122744365 + AluSp SINE Alu 1 295 -18 1593 201 7 0 chr10 22845448 22845732 -122743556 - AluJo SINE Alu -26 286 1 26 0 0 0 chr10 22845829 22845855 -122743433 + AT_rich Low_complexity Low_complexity 1 26 0 1826 163 7 3 chr10 22845855 22846144 -122743144 - AluSx SINE Alu -22 290 1 1372 149 12 99 chr10 22846176 22846498 -122742790 - AluJb SINE Alu -18 294 1 2145 101 28 0 chr10 22846500 22846788 -122742500 - AluSp SINE Alu -17 296 1 1162 92 0 0 chr10 22846793 22846935 -122742353 - AluSq/x SINE Alu -171 142 1 707 150 9 0 chr10 22847164 22847277 -122742011 - FLAM_A SINE Alu -5 137 24 1957 121 6 58 chr10 22847285 22847598 -122741690 - AluSx SINE Alu -9 303 7 306 280 86 31 chr10 22847945 22848128 -122741160 - L1MEd LINE L1 -4862 1257 1055 2192 118 13 0 chr10 22848128 22848434 -122740854 - AluY SINE Alu -1 310 1 306 280 86 31 chr10 22848434 22848507 -122740781 - L1MEd LINE L1 -5064 1055 987 1969 104 45 7 chr10 22848888 22849175 -122740113 - AluSg SINE Alu -12 298 1 1950 100 86 4 chr10 22849425 22849704 -122739584 - AluSx SINE Alu -10 302 1 1904 158 3 3 chr10 22850300 22850597 -122738691 - AluSx SINE Alu -15 297 1 2264 86 22 32 chr10 22850677 22850990 -122738298 - AluSg SINE Alu 0 310 1 243 0 0 0 chr10 22851055 22851082 -122738206 + (T)n Simple_repeat Simple_repeat 1 27 0 21 0 0 0 chr10 22851520 22851541 -122737747 + AT_rich Low_complexity Low_complexity 1 21 0 1847 141 11 0 chr10 22851566 22851836 -122737452 - AluSx SINE Alu -18 294 22 908 172 7 0 chr10 22851838 22851989 -122737299 - AluJo SINE Alu -158 154 3 2376 99 0 3 chr10 22852154 22852457 -122736831 - AluSq SINE Alu -11 302 1 199 140 0 53 chr10 22852517 22852574 -122736714 + (TTTTC)n Simple_repeat Simple_repeat 3 56 0 285 261 34 34 chr10 22852578 22852697 -122736591 + CT-rich Low_complexity Low_complexity 3 121 0 1569 230 112 72 chr10 22852711 22853091 -122736197 - HAL1 LINE L1 -606 1901 1538 2071 140 3 3 chr10 22853091 22853391 -122735897 - AluSx SINE Alu -12 300 1 1569 230 112 72 chr10 22853391 22853405 -122735883 - HAL1 LINE L1 -969 1538 1526 2267 126 7 0 chr10 22853405 22853715 -122735573 - AluSx SINE Alu 0 312 1 1569 230 112 72 chr10 22853715 22854084 -122735204 - HAL1 LINE L1 -981 1526 1106 265 205 116 4 chr10 22854136 22854205 -122735083 - AluJ/FLAM SINE Alu -236 66 1 2163 95 3 33 chr10 22854219 22854524 -122734764 - AluSc SINE Alu -13 296 1 2234 107 7 0 chr10 22854574 22854884 -122734404 - AluSq SINE Alu -1 312 1 259 278 120 73 chr10 22854888 22854965 -122734323 - HAL1 LINE L1 -1429 1078 1006 209 56 0 28 chr10 22854965 22855001 -122734287 + (TTTAA)n Simple_repeat Simple_repeat 3 37 0 1993 133 3 0 chr10 22855001 22855286 -122734002 - AluSx SINE Alu -26 286 1 259 278 120 73 chr10 22855286 22855439 -122733849 - HAL1 LINE L1 -1501 1006 862 1945 108 36 46 chr10 22855439 22855744 -122733544 - AluSp SINE Alu -11 302 1 2125 92 46 0 chr10 22855745 22856026 -122733262 - AluSx SINE Alu -18 294 1 259 278 120 73 chr10 22856026 22856133 -122733155 - HAL1 LINE L1 -1644 863 721 265 258 96 110 chr10 22856261 22856626 -122732662 - HAL1 LINE L1 -1995 512 153 421 251 262 55 chr10 22857329 22857676 -122731612 - MLT1K LTR MaLR -167 421 3 2356 99 3 3 chr10 22857701 22858014 -122731274 - AluSq SINE Alu 0 313 1 502 141 10 61 chr10 22858143 22858242 -122731046 + FRAM SINE Alu 77 170 -6 769 128 0 66 chr10 22858296 22858448 -122730840 - FLAM_C SINE Alu 0 143 5 28 0 0 0 chr10 22858456 22858484 -122730804 + AT_rich Low_complexity Low_complexity 1 28 0 385 243 86 111 chr10 22858530 22858850 -122730438 - L1M4 LINE L1 -1273 4873 4563 2117 121 14 0 chr10 22858850 22859140 -122730148 - AluSg SINE Alu -15 295 2 385 243 86 111 chr10 22859140 22859214 -122730074 - L1M4 LINE L1 -1583 4563 4489 3757 184 42 65 chr10 22859218 22859774 -122729514 - L1MB4 LINE L1 -3 6177 5610 2183 80 28 3 chr10 22859774 22860062 -122729226 - AluSp SINE Alu -18 295 1 3757 184 42 65 chr10 22860062 22860193 -122729095 - L1MB4 LINE L1 -570 5610 5478 1296 236 51 20 chr10 22860193 22860348 -122728940 - AluJo SINE Alu 0 302 153 222 37 0 0 chr10 22860348 22860375 -122728913 + (CCA)n Simple_repeat Simple_repeat 2 28 0 1296 236 51 20 chr10 22860375 22860512 -122728776 - AluJo SINE Alu -149 153 1 3757 184 42 65 chr10 22860512 22861001 -122728287 - L1MB4 LINE L1 -702 5478 4979 2020 102 0 48 chr10 22861001 22861322 -122727966 - AluSg SINE Alu 0 307 1 3757 184 42 65 chr10 22861322 22861575 -122727713 - L1MB4 LINE L1 -1201 4979 4722 2264 109 0 0 chr10 22861575 22861868 -122727420 - AluSp SINE Alu -19 294 2 3757 184 42 65 chr10 22861868 22862089 -122727199 - L1MB4 LINE L1 -1458 4722 4583 2381 109 0 0 chr10 22862089 22862400 -122726888 - AluSq SINE Alu -1 312 2 3757 184 42 65 chr10 22862400 22862543 -122726745 - L1MB4 LINE L1 -1597 4583 4438 1940 81 12 0 chr10 22862573 22862820 -122726468 - AluSp SINE Alu -1 312 63 281 95 0 0 chr10 22862820 22862862 -122726426 - L1M4c LINE L1 -6326 58 17 * 1125 206 124 57 chr10 22862861 22863006 -122726282 - L1MD1 LINE L1 -197 6045 5911 2046 129 7 0 chr10 22863006 22863300 -122725988 + AluSx SINE Alu 1 296 -16 1125 206 124 57 chr10 22863300 22863553 -122725735 - L1MD1 LINE L1 -331 5911 5433 2296 78 0 0 chr10 22863555 22863875 -122725413 - AluY SINE Alu 0 320 1 1055 178 138 40 chr10 22863886 22864133 -122725155 - AluJo SINE Alu -21 291 21 426 156 3 46 chr10 22864146 22864237 -122725051 - L1MD1 LINE L1 -802 5440 5362 659 183 0 0 chr10 22864237 22864341 -122724947 - U6 snRNA snRNA -3 104 1 426 156 3 46 chr10 22864341 22864386 -122724902 - L1MD1 LINE L1 -880 5362 5317 1544 82 0 10 chr10 22864410 22864604 -122724684 + AluSp SINE Alu 108 299 -14 1144 212 79 80 chr10 22864605 22865064 -122724224 - L1MDa LINE L1 -3464 3076 2618 2055 137 0 3 chr10 22865064 22865370 -122723918 - AluSg SINE Alu -5 305 1 1793 181 0 0 chr10 22865370 22865669 -122723619 - AluJo SINE Alu -13 299 1 1144 212 79 80 chr10 22865669 22865709 -122723579 - L1MDa LINE L1 -3921 2619 2580 1914 146 10 16 chr10 22865709 22866018 -122723270 - AluSx SINE Alu -5 307 1 1144 212 79 80 chr10 22866018 22866100 -122723188 - L1MDa LINE L1 -3960 2580 2499 1940 147 14 0 chr10 22866100 22866386 -122722902 - AluSq SINE Alu -18 295 6 1144 212 79 80 chr10 22866386 22866463 -122722825 - L1MDa LINE L1 -4041 2499 2404 2378 86 3 0 chr10 22866575 22866876 -122722412 - AluSp SINE Alu -11 302 1 2608 268 52 38 chr10 22866884 22867579 -122721709 - L1MDa LINE L1 -5452 1088 288 2255 96 7 0 chr10 22867579 22867881 -122721407 - AluSx SINE Alu -8 304 1 2608 268 52 38 chr10 22867881 22868173 -122721115 - L1MDa LINE L1 -6252 288 2 1021 225 205 10 chr10 22868164 22868355 -122720933 - L1MEc LINE L1 -2958 3257 3105 * 1882 123 7 32 chr10 22868355 22868698 -122720590 - AluSg1 SINE Alu 0 309 1 1021 225 205 10 chr10 22868698 22869018 -122720270 - L1MEc LINE L1 -3110 3105 2634 818 175 12 31 chr10 22869029 22869189 -122720099 - AluJo/FRAM SINE Alu -22 290 134 2296 92 7 0 chr10 22869189 22869484 -122719804 - AluSx SINE Alu -15 297 1 1283 155 97 54 chr10 22869508 22869661 -122719627 - AluJb SINE Alu -22 290 145 2214 122 3 0 chr10 22869661 22869972 -122719316 - AluSp SINE Alu -1 312 1 306 73 0 0 chr10 22869976 22870017 -122719271 + (TG)n Simple_repeat Simple_repeat 2 42 0 1283 155 97 54 chr10 22870017 22870136 -122719152 - AluJb SINE Alu -169 143 1 2381 264 60 37 chr10 22870393 22871450 -122717838 - L1MEc LINE L1 -5308 1088 8 3190 222 131 98 chr10 22871460 22872380 -122716908 - L1MEc LINE L1 -743 5472 4584 1890 146 37 3 chr10 22872380 22872674 -122716614 - AluSx SINE Alu -8 304 1 3190 222 131 98 chr10 22872674 22873052 -122716236 - L1MEc LINE L1 -1631 4584 4220 690 223 7 14 chr10 22873052 22873191 -122716097 - MER74A LTR ERVL 0 558 421 3190 222 131 98 chr10 22873191 22873381 -122715907 - L1MEc LINE L1 -1995 4220 4038 1501 118 49 37 chr10 22873381 22873627 -122715661 - AluSx SINE Alu -63 249 1 3190 222 131 98 chr10 22873627 22874170 -122715118 - L1MEc LINE L1 -2177 4038 3514 4495 117 13 11 chr10 22874170 22874804 -122714484 - MER41B LTR ERV1 0 635 1 3190 222 131 98 chr10 22874804 22874942 -122714346 - L1MEc LINE L1 -2701 3514 3382 297 0 0 0 chr10 22874942 22874975 -122714313 + (TTTTA)n Simple_repeat Simple_repeat 1 33 0 1852 154 0 18 chr10 22874975 22875260 -122714028 - AluSx SINE Alu -32 280 1 3190 222 131 98 chr10 22875260 22875654 -122713634 - L1MEc LINE L1 -2832 3383 2445 1855 157 0 37 chr10 22875671 22875995 -122713293 - AluSx SINE Alu 0 312 1 2355 68 10 0 chr10 22876006 22876302 -122712986 - AluY SINE Alu -12 299 1 272 233 105 0 chr10 22876304 22876390 -122712898 - L1MEc LINE L1 -4004 2392 2298 2367 97 0 0 chr10 22876395 22876694 -122712594 - AluSp SINE Alu -14 299 1 3223 202 71 27 chr10 22876721 22877225 -122712063 - L1MB7 LINE L1 -106 6078 5597 2147 110 3 29 chr10 22877225 22877534 -122711754 - AluSx SINE Alu -11 301 1 3223 202 71 27 chr10 22877534 22877642 -122711646 - L1MB7 LINE L1 -587 5597 5495 2067 130 3 16 chr10 22877642 22877958 -122711330 - AluSx SINE Alu 0 312 1 3223 202 71 27 chr10 22877958 22878439 -122710849 - L1MB7 LINE L1 -689 5495 4936 1352 278 95 52 chr10 22878507 22879326 -122709962 - L1MEc LINE L1 -4382 2014 1145 2320 93 3 3 chr10 22879326 22879626 -122709662 - AluSp SINE Alu -13 300 1 1352 278 95 52 chr10 22879626 22879770 -122709518 - L1MEc LINE L1 -5251 1145 1009 906 186 11 11 chr10 22879770 22879947 -122709341 - FRAM SINE Alu 0 176 1 2351 83 0 7 chr10 22880153 22880453 -122708835 - AluY SINE Alu -13 298 1 1985 138 0 39 chr10 22880464 22880775 -122708513 - AluSg SINE Alu -11 299 1 2420 70 3 7 chr10 22880808 22881109 -122708179 - AluY SINE Alu -11 300 1 1895 113 39 53 chr10 22881120 22881289 -122707999 - MER7C DNA MER2_type -2665 363 200 1826 157 78 28 chr10 22881289 22881646 -122707642 + THE1C LTR MaLR 1 375 0 1895 113 39 53 chr10 22881646 22881813 -122707475 - MER7C DNA MER2_type -2828 200 32 1233 133 76 4 chr10 22881824 22881873 -122707415 + Tigger7 DNA MER2_type 2347 2391 -196 1904 126 19 35 chr10 22881873 22882183 -122707105 - AluSx SINE Alu -7 305 1 1233 133 76 4 chr10 22882183 22882358 -122706930 + Tigger7 DNA MER2_type 2391 2587 0 452 312 141 44 chr10 22882358 22882653 -122706635 - L2 LINE L2 -680 2634 2369 2004 141 10 3 chr10 22882653 22882951 -122706337 + AluSx SINE Alu 1 300 -12 452 312 141 44 chr10 22882951 22883222 -122706066 - L2 LINE L2 -945 2369 2013 1708 187 82 41 chr10 22883232 22883626 -122705662 - MSTB LTR MaLR -1 400 1 2543 48 3 0 chr10 22883636 22883931 -122705357 - AluY SINE Alu -15 296 1 2258 85 0 10 chr10 22883931 22884226 -122705062 - AluSc SINE Alu -17 292 1 804 173 0 0 chr10 22884250 22884377 -122704911 - FLAM_C SINE Alu -16 127 1 279 188 0 50 chr10 22884460 22884561 -122704727 + (TA)n Simple_repeat Simple_repeat 1 96 0 262 322 0 0 chr10 22884572 22884659 -122704629 - L1MC4 LINE L1 -1342 6700 6614 236 261 45 23 chr10 22884581 22884669 -122704619 + L1MC4 LINE L1 6614 6703 -1339 * 1906 145 3 19 chr10 22884676 22884987 -122704301 - AluJb SINE Alu -6 306 1 2168 107 3 3 chr10 22885525 22885825 -122703463 - AluSp SINE Alu -13 300 1 2049 124 10 0 chr10 22886369 22886660 -122702628 + AluSx SINE Alu 1 294 -18 1541 161 9 82 chr10 22886881 22887211 -122702077 + AluJb SINE Alu 1 306 -6 339 225 159 84 chr10 22887718 22887823 -122701465 - L1MC4 LINE L1 -1864 5944 5848 2088 124 16 10 chr10 22887823 22888129 -122701159 - AluSx SINE Alu -3 309 2 339 225 159 84 chr10 22888129 22888414 -122700874 - L1MC4 LINE L1 -1960 5848 5525 351 158 87 47 chr10 22888437 22888564 -122700724 - L1MC4 LINE L1 -2340 5468 5337 1354 156 176 4 chr10 22888584 22888840 -122700448 - AluSg1 SINE Alu -9 300 1 819 224 6 18 chr10 22889088 22889253 -122700035 - FRAM SINE Alu -12 164 2 180 219 0 0 chr10 22889646 22889687 -122699601 + C-rich Low_complexity Low_complexity 3 43 0 1547 168 24 40 chr10 22889707 22890004 -122699284 - AluJo SINE Alu -20 292 1 884 259 39 65 chr10 22890017 22890108 -122699180 - L1MEd LINE L1 -2708 3421 3329 2246 109 3 0 chr10 22890108 22890402 -122698886 - AluSx SINE Alu -17 295 1 884 259 39 65 chr10 22890402 22890800 -122698488 - L1MEd LINE L1 -2800 3329 2945 1511 134 4 35 chr10 22890802 22891063 -122698225 - AluJb SINE Alu 0 312 60 301 243 0 0 chr10 22891098 22891172 -122698116 - L1MEd LINE L1 -3176 2953 2880 24 0 0 0 chr10 22891330 22891354 -122697934 + AT_rich Low_complexity Low_complexity 1 24 0 2055 145 10 0 chr10 22891487 22891784 -122697504 - AluSx SINE Alu -12 300 1 2393 62 0 28 chr10 22892207 22892527 -122696761 - AluY SINE Alu 0 311 1 429 306 97 49 chr10 22892575 22892863 -122696425 - L1MEd LINE L1 -4874 1245 972 1581 183 38 3 chr10 22892863 22893152 -122696136 - AluJo SINE Alu -13 299 1 429 306 97 49 chr10 22893152 22893408 -122695880 - L1MEd LINE L1 -5147 972 661 2079 145 3 0 chr10 22893408 22893719 -122695569 + AluSx SINE Alu 1 312 0 429 306 97 49 chr10 22893719 22893846 -122695442 - L1MEd LINE L1 -5458 661 541 2092 107 13 19 chr10 22894032 22894340 -122694948 + AluSp SINE Alu 1 306 -7 1118 32 0 0 chr10 22894488 22894612 -122694676 + AluSp/q SINE Alu 174 297 -16 26 30 0 0 chr10 22895875 22895908 -122693380 + AT_rich Low_complexity Low_complexity 1 33 0 25 0 0 0 chr10 22896397 22896422 -122692866 + AT_rich Low_complexity Low_complexity 1 25 0 27 0 0 0 chr10 22896514 22896541 -122692747 + AT_rich Low_complexity Low_complexity 1 27 0 3604 230 115 22 chr10 22896831 22897125 -122692163 - L1MC4 LINE L1 0 8042 7777 1971 149 3 7 chr10 22897125 22897433 -122691855 - AluSx SINE Alu -3 309 3 3604 230 115 22 chr10 22897433 22898352 -122690936 - L1MC4 LINE L1 -265 7777 6636 1870 143 17 20 chr10 22898365 22898659 -122690629 + AluSx SINE Alu 1 293 -19 2240 98 3 3 chr10 22898661 22898956 -122690332 + AluSg SINE Alu 1 295 -15 1256 116 0 0 chr10 22898956 22899120 -122690168 + AluSg/x SINE Alu 134 297 -15 470 246 166 0 chr10 22899158 22899345 -122689943 - L1MC4 LINE L1 -1363 6679 6462 1576 174 4 29 chr10 22899354 22899635 -122689653 - AluJb SINE Alu -38 274 1 272 292 81 47 chr10 22899735 22899971 -122689317 - L1M4 LINE L1 -1159 4987 4744 315 0 0 0 chr10 22900132 22900167 -122689121 + (CA)n Simple_repeat Simple_repeat 2 36 0 1679 198 7 7 chr10 22900716 22901009 -122688279 - AluJb SINE Alu -19 293 1 1285 203 23 62 chr10 22901294 22901600 -122687688 - AluJo SINE Alu -8 294 1 207 0 0 0 chr10 22901610 22901633 -122687655 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 2471 47 0 13 chr10 22902497 22902795 -122686493 - AluY SINE Alu -17 294 1 1997 122 13 45 chr10 22902818 22903129 -122686159 - AluSq SINE Alu -12 301 1 230 232 10 61 chr10 22903278 22903377 -122685911 - L1MC5 LINE L1 -51 7910 7817 1860 195 49 42 chr10 22903394 22903845 -122685443 - MLT1C LTR MaLR -13 454 1 1018 238 49 121 chr10 22903846 22904090 -122685198 - MLT1C-int LTR MaLR -1 1734 1474 1742 127 45 4 chr10 22904090 22904358 -122684930 + AluSx SINE Alu 11 289 -23 1018 238 49 121 chr10 22904358 22904596 -122684692 - MLT1C-int LTR MaLR -261 1474 946 852 188 0 0 chr10 22904736 22904874 -122684414 + FAM SINE Alu 1 48 -1 1252 183 20 36 chr10 22904874 22905156 -122684132 - MER47B DNA MER2_type -84 334 2 1390 187 41 10 chr10 22905206 22905500 -122683788 - AluJb SINE Alu -9 303 1 1784 158 121 36 chr10 22905630 22906017 -122683271 + Tigger1 DNA MER2_type 2 421 -1997 4404 147 33 4 chr10 22906017 22906740 -122682548 + Tigger1 DNA MER2_type 1326 2069 -349 661 196 54 0 chr10 22906745 22906857 -122682431 + FLAM_C SINE Alu 2 119 -24 394 228 0 0 chr10 22906879 22906958 -122682330 + Tigger1 DNA MER2_type 2109 2187 -231 2214 100 13 3 chr10 22907082 22907381 -122681907 - AluSp SINE Alu -11 302 1 972 275 105 49 chr10 22907546 22907919 -122681369 - L1M4c LINE L1 -4502 2455 2105 1748 168 0 34 chr10 22907919 22908240 -122681048 - AluJo SINE Alu -2 310 1 972 275 105 49 chr10 22908240 22908573 -122680715 - L1M4c LINE L1 -4852 2105 1659 790 200 111 33 chr10 22908595 22908865 -122680423 - L1M4c LINE L1 -5361 1498 1208 355 220 46 55 chr10 22909298 22909491 -122679797 - L1M4c LINE L1 -5646 1213 798 279 190 0 0 chr10 22909581 22909639 -122679649 - L1MA7 LINE L1 -2 6289 6232 192 77 0 0 chr10 22909645 22909671 -122679617 + (CA)n Simple_repeat Simple_repeat 1 26 0 764 301 82 48 chr10 22909678 22910034 -122679254 - L1M4c LINE L1 -6046 813 446 1030 243 84 13 chr10 22910048 22910357 -122678931 - L1M4c LINE L1 -6489 370 40 32 26 0 0 chr10 22910382 22910421 -122678867 + AT_rich Low_complexity Low_complexity 1 39 0 2332 90 0 37 chr10 22910748 22911070 -122678218 - AluSq SINE Alu -1 312 3 332 261 72 14 chr10 22912435 22912573 -122676715 + MIR SINE MIR 110 255 -7 2264 118 3 0 chr10 22912676 22912982 -122676306 + AluSx SINE Alu 2 308 -4 1801 177 0 13 chr10 22913384 22913695 -122675593 + AluSx SINE Alu 2 308 -4 1854 133 29 42 chr10 22913703 22914011 -122675277 + AluJo SINE Alu 1 304 -8 2362 103 3 0 chr10 22914939 22915250 -122674038 + AluSp SINE Alu 1 312 -1 22 0 0 0 chr10 22915733 22915755 -122673533 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr10 22916341 22916369 -122672919 + AT_rich Low_complexity Low_complexity 1 28 0 198 103 0 0 chr10 22916834 22916863 -122672425 + (TA)n Simple_repeat Simple_repeat 1 29 0 785 154 60 20 chr10 22917636 22917785 -122671503 + AluJb SINE Alu 133 287 -25 1875 116 37 34 chr10 22917990 22918284 -122671004 + AluSg SINE Alu 1 295 -15 778 172 0 0 chr10 22918399 22918527 -122670761 - AluSg/x SINE Alu -14 298 171 1754 124 27 8 chr10 22918528 22918787 -122670501 - AluSg SINE Alu -44 266 3 375 23 0 0 chr10 22918789 22918833 -122670455 + (CA)n Simple_repeat Simple_repeat 2 45 0 2360 68 26 23 chr10 22919682 22919991 -122669297 - AluSg SINE Alu 0 310 1 321 243 27 0 chr10 22920107 22920181 -122669107 + Tigger5 DNA MER2_type 1 76 -2247 396 205 0 0 chr10 22920184 22920262 -122669026 - Tigger5 DNA MER2_type -4 2319 2242 24 53 0 0 chr10 22920414 22920452 -122668836 + AT_rich Low_complexity Low_complexity 1 38 0 1960 109 32 3 chr10 22920461 22920746 -122668542 - AluSq SINE Alu -20 293 1 1916 59 4 43 chr10 22920751 22921007 -122668281 - AluY SINE Alu -15 296 51 2444 58 0 3 chr10 22921014 22921308 -122667980 - AluY SINE Alu -18 293 1 21 36 0 0 chr10 22921367 22921395 -122667893 + GC_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr10 22921657 22921681 -122667607 + AT_rich Low_complexity Low_complexity 1 24 0 1748 145 16 35 chr10 22921910 22922227 -122667061 - AluJo SINE Alu -1 311 1 2299 242 70 27 chr10 22922457 22923209 -122666079 - MER21B LTR ERV1 -60 803 19 321 195 65 26 chr10 22923233 22923310 -122665978 - MER21B LTR ERV1 -776 87 8 185 152 0 30 chr10 22923587 22923620 -122665668 - MIR SINE MIR -145 117 86 572 184 54 78 chr10 22926163 22926408 -122662880 - MSTC LTR MaLR -151 245 3 997 207 51 113 chr10 22926826 22927339 -122661949 - L1MC4 LINE L1 -6 8036 7556 586 312 19 31 chr10 22927497 22927856 -122661432 - MLT1F-int LTR MaLR -770 601 247 1066 246 112 57 chr10 22928004 22928195 -122661093 - MLT1F LTR MaLR 0 542 363 2154 117 3 19 chr10 22928195 22928504 -122660784 - AluSx SINE Alu -8 304 1 1983 116 33 23 chr10 22928504 22928807 -122660481 - AluSx SINE Alu -6 306 1 1066 246 112 57 chr10 22928807 22929017 -122660271 - MLT1F LTR MaLR -178 364 118 184 125 0 42 chr10 22929035 22929083 -122660205 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 234 137 20 0 chr10 22929089 22929140 -122660148 - L1MB4 LINE L1 -2 6178 6127 233 214 236 0 chr10 22929164 22929253 -122660035 - MLT1F LTR MaLR -432 110 1 471 208 72 8 chr10 22929253 22929378 -122659910 - L1MC4 LINE L1 -763 7279 7147 787 178 13 32 chr10 22929592 22929749 -122659539 + FRAM SINE Alu 13 166 -10 806 210 75 50 chr10 22930194 22930582 -122658706 + LTR40b LTR ERVL 1 462 0 2504 58 0 13 chr10 22930793 22931104 -122658184 + AluY SINE Alu 2 308 -3 21 0 0 0 chr10 22931196 22931217 -122658071 + AT_rich Low_complexity Low_complexity 1 21 0 1650 146 158 47 chr10 22931241 22931626 -122657662 - MSTA LTR MaLR 0 428 1 26 30 0 0 chr10 22932183 22932216 -122657072 + AT_rich Low_complexity Low_complexity 1 33 0 187 349 0 15 chr10 22932290 22932356 -122656932 - L2 LINE L2 -8 3305 3241 468 253 57 0 chr10 22932576 22932734 -122656554 - MER104 DNA Tc2 -13 167 1 404 217 160 0 chr10 22932903 22933009 -122656279 + MIR SINE MIR 114 236 -26 1552 168 66 11 chr10 22933186 22933460 -122655828 + AluJo SINE Alu 1 289 -23 2467 238 75 35 chr10 22933472 22933746 -122655542 - L1MC4 LINE L1 -155 7887 7625 1769 127 35 0 chr10 22933746 22934005 -122655283 + AluSx SINE Alu 26 293 -19 2467 238 75 35 chr10 22934005 22934777 -122654511 - L1MC4 LINE L1 -417 7625 6799 1875 134 19 0 chr10 22935141 22935409 -122653879 - AluSx SINE Alu -19 293 21 953 126 0 0 chr10 22935483 22935626 -122653662 - AluSp/q SINE Alu -6 307 165 403 175 0 0 chr10 22935626 22935689 -122653599 - AluS SINE Alu -250 63 1 198 0 0 0 chr10 22935689 22935711 -122653577 + (T)n Simple_repeat Simple_repeat 1 22 0 1675 173 0 29 chr10 22935880 22936193 -122653095 - AluJo SINE Alu -8 304 1 1410 109 5 0 chr10 22936329 22936522 -122652766 - AluSq SINE Alu -4 309 116 3225 294 66 17 chr10 22936748 22937922 -122651366 - HERVL40 LTR ERVL -2769 2761 1530 503 202 0 0 chr10 22937924 22938013 -122651275 - MER58C DNA MER1_type 0 215 127 629 249 75 19 chr10 22938106 22938319 -122650969 - HERVL40 LTR ERVL -3995 1535 1311 545 174 0 0 chr10 22938323 22938409 -122650879 + AluJ/FLAM SINE Alu 1 86 -226 300 244 70 43 chr10 22938441 22938556 -122650732 - HERVL40 LTR ERVL -4218 1312 1195 1014 251 67 25 chr10 22938562 22938889 -122650399 - HERVL40 LTR ERVL -5188 342 2 1762 149 41 28 chr10 22938952 22939754 -122649534 - MER21B LTR ERV1 -49 814 70 286 136 17 17 chr10 22939867 22939926 -122649362 - MER21A LTR ERV1 -864 67 9 229 109 91 0 chr10 22939926 22939981 -122649307 + (TTATA)n Simple_repeat Simple_repeat 5 64 0 451 123 71 18 chr10 22939981 22940151 -122649137 + (TA)n Simple_repeat Simple_repeat 2 180 0 1155 254 70 14 chr10 22940202 22940560 -122648728 - LTR40b LTR ERVL -84 378 1 549 274 82 21 chr10 22940651 22940953 -122648335 - MLT1J1 LTR MaLR -129 321 1 372 283 105 47 chr10 22940975 22941233 -122648055 - HAL1b LINE L1 -14 1334 1062 918 163 11 45 chr10 22941233 22941411 -122647877 + AluJo SINE Alu 104 275 -37 284 256 0 0 chr10 22941429 22941511 -122647777 - HAL1b LINE L1 -331 1017 936 332 301 65 0 chr10 22941529 22941652 -122647636 - MLT1L LTR MaLR -6 609 479 2196 92 3 7 chr10 22941832 22942127 -122647161 + AluSq SINE Alu 1 294 -19 2398 94 0 0 chr10 22942138 22942447 -122646841 + AluSx SINE Alu 1 309 -3 2259 112 0 16 chr10 22942780 22943092 -122646196 - AluSx SINE Alu -1 311 5 826 224 125 13 chr10 22943140 22943453 -122645835 - HAL1b LINE L1 -579 769 422 364 321 77 24 chr10 22943539 22943707 -122645581 - HAL1b LINE L1 -1096 252 76 1579 176 36 13 chr10 22944393 22944694 -122644594 - AluJb SINE Alu -4 308 1 187 384 41 0 chr10 22945368 22945441 -122643847 - L3 LINE CR1 -1273 304 229 2071 140 3 3 chr10 22945686 22945993 -122643295 + AluSx SINE Alu 1 307 -5 2448 66 0 3 chr10 22946617 22946919 -122642369 - AluY SINE Alu -10 301 1 297 263 174 54 chr10 22946940 22947138 -122642150 - L1ME LINE L1 -324 5797 5559 651 209 0 16 chr10 22947138 22947267 -122642021 + FLAM_A SINE Alu 1 127 -6 297 263 174 54 chr10 22947267 22947327 -122641961 - L1ME LINE L1 -562 5559 5508 23 78 0 0 chr10 22947511 22947562 -122641726 + AT_rich Low_complexity Low_complexity 1 51 0 2491 118 6 3 chr10 22948445 22948808 -122640480 - THE1B LTR MaLR 0 364 1 1737 178 0 4 chr10 22948864 22949140 -122640148 - AluJb SINE Alu -37 275 1 444 252 110 62 chr10 22949261 22949680 -122639608 - MLT1H LTR MaLR -107 448 52 318 118 0 78 chr10 22949764 22949850 -122639438 + AluJo SINE Alu 80 139 -163 1136 188 109 33 chr10 22949853 22950129 -122639159 + AluJb SINE Alu 1 297 -15 21 0 0 0 chr10 22950516 22950537 -122638751 + AT_rich Low_complexity Low_complexity 1 21 0 2125 114 0 0 chr10 22950798 22951133 -122638155 - AluSg SINE Alu 0 335 1 2320 109 0 0 chr10 22951664 22951975 -122637313 - AluY SINE Alu 0 311 1 401 283 160 11 chr10 22952110 22952297 -122636991 + MIR SINE MIR 48 262 0 1912 256 71 31 chr10 22952335 22952834 -122636454 - L2 LINE L2 -434 2880 2349 2474 191 43 74 chr10 22952834 22953479 -122635809 - MLT1E2 LTR MaLR -1 625 1 1912 256 71 31 chr10 22953479 22953616 -122635672 - L2 LINE L2 -965 2349 2219 412 248 69 41 chr10 22954046 22954224 -122635064 - MIR SINE MIR -63 145 17 2203 113 0 7 chr10 22954799 22955109 -122634179 + AluSg SINE Alu 3 310 0 1327 101 0 0 chr10 22955674 22955842 -122633446 + AluSq SINE Alu 1 168 -145 950 142 0 17 chr10 22955862 22956038 -122633250 + (GGAGAA)n Simple_repeat Simple_repeat 3 175 0 438 232 0 0 chr10 22956051 22956163 -122633125 + GA-rich Low_complexity Low_complexity 49 160 0 2160 110 0 17 chr10 22956568 22956869 -122632419 - AluSx SINE Alu -16 296 1 2131 131 3 0 chr10 22958448 22958746 -122630542 + AluSx SINE Alu 1 299 -13 23 33 0 0 chr10 22959151 22959181 -122630107 + AT_rich Low_complexity Low_complexity 1 30 0 204 240 0 0 chr10 22959548 22959598 -122629690 + (TA)n Simple_repeat Simple_repeat 2 51 0 486 156 3 75 chr10 22959660 22959781 -122629507 - L1MD3 LINE L1 -13 7982 7655 1674 115 11 19 chr10 22962976 22963236 -122626052 + AluSq SINE Alu 1 258 -55 2128 245 199 92 chr10 22963554 22964597 -122624691 - L2 LINE L2 -1090 2224 885 715 162 0 0 chr10 22964597 22964708 -122624580 + FLAM_C SINE Alu 1 111 -32 2128 245 199 92 chr10 22964708 22964997 -122624291 - L2 LINE L2 -2429 885 628 1425 196 49 28 chr10 22965000 22965326 -122623962 - MER58B DNA MER1_type -1 340 8 1159 276 138 21 chr10 22965337 22965851 -122623437 - L2 LINE L2 -2736 578 5 493 84 0 0 chr10 22966021 22966092 -122623196 - L1MA4 LINE L1 -9 6291 6221 2274 111 0 3 chr10 22966817 22967123 -122622165 + AluSx SINE Alu 2 306 -6 1611 229 88 27 chr10 22967842 22968353 -122620935 - L1ME1 LINE L1 -21 6145 5604 2086 105 3 10 chr10 22968376 22968672 -122620616 - AluY SINE Alu -17 294 1 655 182 120 47 chr10 22968673 22968931 -122620357 - L1ME1 LINE L1 -752 5394 5118 2088 118 10 0 chr10 22969219 22969515 -122619773 - AluSq SINE Alu -14 299 1 300 230 0 0 chr10 22969618 22969692 -122619596 - L1MCa LINE L1 -1791 4635 4562 1495 157 57 21 chr10 22969694 22969974 -122619314 - AluJb SINE Alu -22 290 1 2098 235 81 35 chr10 22970139 22970183 -122619105 - L1MCa LINE L1 -3039 3387 3346 2173 113 3 0 chr10 22970183 22970485 -122618803 + AluSx SINE Alu 1 303 -9 1796 112 15 4 chr10 22970485 22970742 -122618546 + AluSq SINE Alu 44 305 -8 2098 235 81 35 chr10 22970742 22971487 -122617801 - L1MCa LINE L1 -3080 3346 2529 731 126 0 0 chr10 22971487 22971590 -122617698 - U6 snRNA snRNA -4 103 1 2098 235 81 35 chr10 22971590 22971865 -122617423 - L1MCa LINE L1 -3897 2529 2268 * 4906 212 74 24 chr10 22971856 22973205 -122616083 - L1MCa LINE L1 -4815 1611 195 1375 112 0 0 chr10 22973216 22973403 -122615885 - AluSp SINE Alu -4 309 123 2026 113 10 10 chr10 22973408 22973701 -122615587 - AluY SINE Alu -5 306 14 480 220 60 27 chr10 22973701 22973851 -122615437 - L1MCa LINE L1 -6252 174 20 902 184 126 95 chr10 22973852 22974155 -122615133 - L1MEc LINE L1 -3118 3097 2774 1756 85 89 26 chr10 22974155 22974426 -122614862 - AluSc SINE Alu -4 305 18 902 184 126 95 chr10 22974426 22974583 -122614705 - L1MEc LINE L1 -3441 2774 2623 992 220 55 124 chr10 22974637 22974782 -122614506 - L1MEc LINE L1 -3900 2496 2343 2280 125 0 0 chr10 22974782 22975094 -122614194 - AluSx SINE Alu 0 312 1 992 220 55 124 chr10 22975094 22975120 -122614168 - L1MEc LINE L1 -4053 2343 2317 1980 136 3 13 chr10 22975120 22975436 -122613852 - AluSp SINE Alu 0 313 1 992 220 55 124 chr10 22975436 22975593 -122613695 - L1MEc LINE L1 -4079 2317 2151 1402 157 114 0 chr10 22975593 22975848 -122613440 - AluSx SINE Alu -28 284 1 992 220 55 124 chr10 22975848 22976231 -122613057 - L1MEc LINE L1 -4245 2151 1833 2212 104 3 3 chr10 22976231 22976539 -122612749 + AluSc SINE Alu 1 308 -1 992 220 55 124 chr10 22976539 22976566 -122612722 - L1MEc LINE L1 -4563 1833 1806 610 203 112 21 chr10 22976587 22976730 -122612558 + Tigger7 DNA MER2_type 4 159 -2328 568 272 61 78 chr10 22976745 22977369 -122611919 - L1MEc LINE L1 -4581 1815 1203 23 0 0 0 chr10 22977485 22977508 -122611780 + AT_rich Low_complexity Low_complexity 1 23 0 259 214 38 145 chr10 22979364 22979495 -122609793 - L2 LINE L2 0 3313 3197 1957 120 32 0 chr10 22980880 22981163 -122608125 - AluSx SINE Alu -18 294 3 1380 161 42 110 chr10 22981222 22981356 -122607932 + AluJb SINE Alu 1 143 -169 1775 170 11 0 chr10 22981356 22981633 -122607655 + AluJb SINE Alu 3 282 -30 1380 161 42 110 chr10 22981633 22981833 -122607455 + AluJb SINE Alu 143 312 0 378 0 0 0 chr10 22982017 22982059 -122607229 + (TG)n Simple_repeat Simple_repeat 2 43 0 713 168 10 149 chr10 22982060 22982268 -122607020 - AluY SINE Alu -26 285 107 1391 98 0 5 chr10 22982269 22982453 -122606835 - AluSg SINE Alu -127 183 1 198 0 0 0 chr10 22983167 22983189 -122606099 + (T)n Simple_repeat Simple_repeat 1 22 0 198 103 0 0 chr10 22984812 22984841 -122604447 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 182 268 36 0 chr10 22984841 22984897 -122604391 - L2 LINE L2 -300 2972 2915 * 358 242 248 0 chr10 22984892 22985041 -122604247 - MIR SINE MIR 0 262 77 617 281 26 70 chr10 22985101 22985329 -122603959 - MER20 DNA MER1_type 0 219 2 2124 82 43 3 chr10 22985996 22986278 -122603010 + AluY SINE Alu 1 293 -18 2418 90 0 0 chr10 22986287 22986599 -122602689 + AluSx SINE Alu 1 312 0 232 255 0 0 chr10 22986827 22986878 -122602410 - MIR SINE MIR -19 243 193 1746 166 29 26 chr10 22987228 22987571 -122601717 + MER2 DNA MER2_type 1 344 0 410 264 41 8 chr10 22987707 22987828 -122601460 + L2 LINE L2 3148 3272 0 1989 131 0 3 chr10 22987944 22988251 -122601037 - AluSc SINE Alu 0 306 1 848 72 88 0 chr10 22989335 22989460 -122599828 + MER85 DNA T2_type 1 136 -3 997 151 42 26 chr10 22989534 22989726 -122599562 - MER46A DNA MER2_type 0 236 42 2081 117 33 0 chr10 22990050 22990349 -122598939 - AluSx SINE Alu -3 309 1 1992 113 58 0 chr10 22990544 22990818 -122598470 + AluSx SINE Alu 7 296 -16 212 264 138 11 chr10 22991208 22991295 -122597993 - MIR SINE MIR -161 101 4 820 163 65 0 chr10 22993596 22993749 -122595539 - AluSq SINE Alu -14 299 137 955 175 0 48 chr10 22993838 22994027 -122595261 - FRAM SINE Alu 0 176 1 238 281 55 85 chr10 22994097 22994332 -122594956 + L2 LINE L2 2149 2376 -938 2215 95 0 24 chr10 22995196 22995490 -122593798 - AluSx SINE Alu -25 287 1 24 67 0 0 chr10 22996241 22996286 -122593002 + AT_rich Low_complexity Low_complexity 1 45 0 1965 135 3 3 chr10 22996549 22996852 -122592436 + AluSx SINE Alu 1 303 0 553 155 9 9 chr10 22999395 22999511 -122589777 + (TA)n Simple_repeat Simple_repeat 2 117 0 228 391 71 18 chr10 22999565 22999790 -122589498 - L2 LINE L2 -527 2787 2551 26 64 0 0 chr10 23000222 23000269 -122589019 + AT_rich Low_complexity Low_complexity 1 47 0 184 326 0 0 chr10 23000692 23000741 -122588547 + L2 LINE L2 2581 2629 -685 1827 147 3 29 chr10 23001733 23002040 -122587248 + AluSx SINE Alu 3 301 -11 252 0 0 0 chr10 23002170 23002198 -122587090 + (TTA)n Simple_repeat Simple_repeat 2 29 0 687 161 0 0 chr10 23002206 23002318 -122586970 - FLAM_C SINE Alu -31 112 1 1662 170 13 27 chr10 23002335 23002635 -122586653 - AluJo SINE Alu -16 296 1 578 307 31 21 chr10 23003461 23003787 -122585501 - L1MEd LINE L1 -4869 1250 922 293 193 0 0 chr10 23003890 23003947 -122585341 - L1MC4 LINE L1 0 8042 7986 784 239 56 0 chr10 23003948 23004145 -122585143 - L1MC4 LINE L1 -140 7902 7695 364 259 9 9 chr10 23004265 23004373 -122584915 - L1MC4 LINE L1 -697 7345 7238 779 172 89 6 chr10 23004374 23004543 -122584745 - L1MC4 LINE L1 -970 7072 6890 828 181 39 44 chr10 23004552 23004734 -122584554 - MLT1E2 LTR MaLR -3 623 443 517 192 32 16 chr10 23004744 23004869 -122584419 - MLT1E2 LTR MaLR -293 333 207 1318 133 133 8 chr10 23004907 23005147 -122584141 - AluSx SINE Alu -2 310 41 352 267 188 34 chr10 23005152 23005328 -122583960 - MLT1E2 LTR MaLR -420 204 2 253 236 81 34 chr10 23005412 23005560 -122583728 - L1MEd LINE L1 -5284 835 681 653 259 125 102 chr10 23005565 23005997 -122583291 - L1MEd LINE L1 -5473 646 205 27 29 0 0 chr10 23006037 23006071 -122583217 + AT_rich Low_complexity Low_complexity 1 34 0 329 73 0 0 chr10 23006168 23006209 -122583079 - MER4E LTR ERV1 -73 693 653 279 292 0 0 chr10 23006210 23006282 -122583006 - L1MEd LINE L1 -6046 73 2 298 258 72 0 chr10 23006319 23006416 -122582872 + L2 LINE L2 1868 1971 -1343 713 312 36 24 chr10 23006631 23006878 -122582410 + L2 LINE L2 2598 2847 -467 225 254 0 30 chr10 23006891 23006958 -122582330 - LTR67 LTR ERVL -3 554 490 2213 110 3 0 chr10 23007033 23007334 -122581954 + AluSq SINE Alu 1 302 -11 10747 179 55 43 chr10 23007771 23008716 -122580572 - L1M2 LINE L1 -2 7003 6070 2245 114 0 0 chr10 23008716 23009022 -122580266 - AluSx SINE Alu -5 307 2 10747 179 55 43 chr10 23009022 23011448 -122577840 - L1M2 LINE L1 -935 6070 3674 1927 136 3 11 chr10 23011448 23011734 -122577554 - AluSx SINE Alu -26 286 3 252 77 0 0 chr10 23011744 23011783 -122577505 + (TCTCG)n Simple_repeat Simple_repeat 2 40 0 2175 118 0 0 chr10 23011785 23012072 -122577216 - AluSc SINE Alu -22 287 1 10747 179 55 43 chr10 23012072 23013398 -122575890 - L1M2 LINE L1 -3339 3666 2357 2322 96 0 3 chr10 23013398 23013691 -122575597 - AluSg SINE Alu -18 292 1 10747 179 55 43 chr10 23013691 23013857 -122575431 - L1M2 LINE L1 -4648 2357 2194 1763 167 43 0 chr10 23013857 23014156 -122575132 - AluSx SINE Alu 0 312 1 10747 179 55 43 chr10 23014156 23014177 -122575111 - L1M2 LINE L1 -4811 2194 2175 261 0 0 0 chr10 23014177 23014206 -122575082 + (TC)n Simple_repeat Simple_repeat 2 30 0 234 0 0 0 chr10 23014205 23014231 -122575057 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 10747 179 55 43 chr10 23014206 23014565 -122574723 - L1M2 LINE L1 -4830 2175 1592 923 185 0 123 chr10 23014669 23014945 -122574343 + AluJb SINE Alu 69 310 -2 509 271 73 18 chr10 23015806 23016024 -122573264 + MIR SINE MIR 3 232 -30 21 71 0 0 chr10 23016244 23016286 -122573002 + AT_rich Low_complexity Low_complexity 1 42 0 222 265 130 60 chr10 23020161 23020539 -122568749 - L2 LINE L2 -174 3139 2736 259 280 51 57 chr10 23020692 23020867 -122568421 - L2 LINE L2 -566 2748 2575 1142 134 12 0 chr10 23020912 23021084 -122568204 - AluSg/x SINE Alu -25 287 114 5756 243 89 16 chr10 23021217 23022678 -122566610 - L1M2 LINE L1 -5279 1570 3 277 260 0 0 chr10 23022764 23022814 -122566474 + L1M2 LINE L1 844 893 -5956 265 313 31 0 chr10 23022842 23022938 -122566350 - MIR SINE MIR -75 187 89 269 310 103 7 chr10 23023357 23023512 -122565776 + L2 LINE L2 1962 2131 -1183 407 328 112 40 chr10 23023552 23023669 -122565619 + L2 LINE L2 2383 2490 -824 2689 30 3 0 chr10 23023669 23023970 -122565318 - AluY SINE Alu -9 302 1 407 328 112 40 chr10 23023970 23024297 -122564991 + L2 LINE L2 2490 2859 -455 224 280 119 21 chr10 23024506 23024649 -122564639 + L2 LINE L2 3152 3308 -5 215 125 25 0 chr10 23024649 23024689 -122564599 + GA-rich Low_complexity Low_complexity 4 44 0 492 266 90 41 chr10 23025370 23025615 -122563673 - MIR SINE MIR -5 257 3 2256 103 23 0 chr10 23025709 23026009 -122563279 - AluSx SINE Alu -5 307 1 1649 145 52 45 chr10 23026211 23026521 -122562767 - AluJb SINE Alu 0 312 1 485 288 103 52 chr10 23026874 23027145 -122562143 - MER102a DNA MER1_type 0 330 46 189 321 88 15 chr10 23027189 23027326 -122561962 + L2 LINE L2 2221 2367 -947 280 314 102 0 chr10 23027360 23027478 -122561810 + MIR SINE MIR 49 178 -84 2211 113 3 0 chr10 23027766 23028057 -122561231 + AluSx SINE Alu 1 292 -20 1617 152 18 73 chr10 23028066 23028394 -122560894 + AluJo SINE Alu 1 310 -2 293 290 109 77 chr10 23028448 23028669 -122560619 + L2 LINE L2 3045 3272 0 186 43 0 0 chr10 23028826 23028849 -122560439 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1084 197 10 25 chr10 23028853 23029051 -122560237 - AluJo SINE Alu -31 281 87 1157 178 53 0 chr10 23029254 23029462 -122559826 - MER20 DNA MER1_type 0 219 1 377 183 49 24 chr10 23029838 23029920 -122559368 - AluS SINE Alu -218 84 1 585 296 246 14 chr10 23029923 23030419 -122558869 - L2 LINE L2 -778 2536 1926 514 183 0 0 chr10 23030419 23030512 -122558776 + AluJb SINE Alu 136 228 -84 272 286 118 35 chr10 23030567 23030822 -122558466 - L2 LINE L2 -1433 1881 1606 241 251 182 5 chr10 23030838 23031025 -122558263 - L2 LINE L2 -1811 1503 1284 2252 89 3 3 chr10 23031326 23031618 -122557670 + AluSg SINE Alu 1 292 -18 1465 211 145 15 chr10 23031967 23032435 -122556853 + L2 LINE L2 1900 2428 -886 242 270 71 86 chr10 23032554 23032936 -122556352 + L2 LINE L2 2854 3294 -19 22 0 0 0 chr10 23036737 23036759 -122552529 + AT_rich Low_complexity Low_complexity 1 22 0 294 219 67 46 chr10 23037384 23037510 -122551778 + MER5B DNA MER1_type 15 168 -21 981 137 0 0 chr10 23038173 23038319 -122550969 - FRAM SINE Alu -31 145 1 2289 90 13 0 chr10 23038940 23039240 -122550048 - AluSx SINE Alu -8 304 1 784 245 66 10 chr10 23039679 23039875 -122549413 + AluJo SINE Alu 86 292 -20 2214 105 18 0 chr10 23039894 23040179 -122549109 + AluSp SINE Alu 1 290 -23 241 324 37 0 chr10 23040561 23040669 -122548619 - MIR SINE MIR -32 230 119 713 177 51 19 chr10 23041962 23042120 -122547168 + AluJo SINE Alu 122 284 -28 252 213 33 0 chr10 23042136 23042197 -122547091 - MLT1A1 LTR MaLR -28 337 275 624 189 8 23 chr10 23042254 23042386 -122546902 - MLT1A1 LTR MaLR -235 130 1 1516 149 75 26 chr10 23042835 23043103 -122546185 - AluJo SINE Alu -31 281 1 261 0 0 0 chr10 23044305 23044334 -122544954 + (CAA)n Simple_repeat Simple_repeat 2 30 0 2723 54 148 8 chr10 23044712 23045104 -122544184 - LTR7 LTR ERV1 -3 447 1 186 71 0 0 chr10 23045219 23045247 -122544041 + (CGGGGG)n Simple_repeat Simple_repeat 4 31 0 184 265 60 36 chr10 23046051 23046134 -122543154 - MIR SINE MIR -61 147 63 413 250 36 42 chr10 23046506 23046674 -122542614 - MIR SINE MIR -35 227 61 332 288 18 9 chr10 23046861 23046972 -122542316 + MARNA DNA Mariner 317 428 -158 1273 152 9 18 chr10 23047157 23047381 -122541907 + AluJo SINE Alu 82 303 -9 1591 155 59 35 chr10 23048505 23048726 -122540562 + MER46B DNA MER2_type 1 109 -2622 2146 120 0 0 chr10 23048726 23049018 -122540270 + AluSx SINE Alu 19 310 -2 1591 155 59 35 chr10 23049018 23049137 -122540151 + MER46B DNA MER2_type 109 224 -12 26 0 0 0 chr10 23050128 23050154 -122539134 + AT_rich Low_complexity Low_complexity 1 26 0 268 294 34 50 chr10 23053277 23053396 -122535892 - MIR SINE MIR -37 225 109 987 181 0 0 chr10 23053708 23053863 -122535425 + FRAM SINE Alu 1 151 -25 358 339 11 0 chr10 23054025 23054163 -122535125 + L1MC4a LINE L1 5421 5562 -605 599 106 80 53 chr10 23054205 23054318 -122534970 + MER3 DNA MER1_type 94 209 0 338 143 0 0 chr10 23054275 23054324 -122534964 - MER3 DNA MER1_type -119 90 42 * 332 286 38 15 chr10 23054324 23054457 -122534831 + L1MC4a LINE L1 5560 5695 -426 1873 152 0 13 chr10 23054469 23054772 -122534516 + AluSx SINE Alu 1 299 -13 2211 86 31 3 chr10 23054852 23055143 -122534145 + AluSx SINE Alu 1 299 -13 24 0 0 0 chr10 23055148 23055172 -122534116 + AT_rich Low_complexity Low_complexity 1 24 0 1901 108 9 93 chr10 23055480 23055812 -122533476 - AluSx SINE Alu -8 304 1 554 277 185 20 chr10 23055889 23056192 -122533096 - Charlie7 DNA MER1_type -243 2369 2017 1061 136 0 7 chr10 23056195 23056349 -122532939 - FRAM SINE Alu -23 153 1 667 194 147 54 chr10 23056351 23056506 -122532782 - Charlie7 DNA MER1_type -603 2009 1870 2205 107 7 3 chr10 23056506 23056806 -122532482 - AluSx SINE Alu -11 301 1 667 194 147 54 chr10 23056806 23056908 -122532380 - Charlie7 DNA MER1_type -742 1870 1728 356 273 29 29 chr10 23057179 23057318 -122531970 - Charlie7 DNA MER1_type -972 1640 1502 582 301 91 46 chr10 23057340 23057669 -122531619 - Charlie7 DNA MER1_type -2266 346 3 410 181 17 36 chr10 23057678 23057816 -122531472 + L1MC4a LINE L1 5716 5819 -302 262 223 177 29 chr10 23057824 23057999 -122531289 + L1ME4a LINE L1 5894 6094 -27 787 132 15 37 chr10 23058804 23058940 -122530348 - FLAM_A SINE Alu 0 133 1 2144 110 3 0 chr10 23059140 23059432 -122529856 + AluSg SINE Alu 1 293 -17 295 357 32 0 chr10 23059982 23060139 -122529149 - MIR3 SINE MIR -11 197 36 325 43 43 0 chr10 23060186 23060233 -122529055 - L1PA6 LINE L1 0 6154 6106 2175 123 3 0 chr10 23060264 23060566 -122528722 + AluSx SINE Alu 1 303 -9 690 179 0 86 chr10 23061011 23061162 -122528126 - FLAM_A SINE Alu -4 138 1 812 191 23 74 chr10 23061166 23061289 -122527999 - L1ME2 LINE L1 0 6164 6055 2138 133 3 0 chr10 23061289 23061583 -122527705 + AluSx SINE Alu 1 295 -17 812 191 23 74 chr10 23061583 23061674 -122527614 - L1ME2 LINE L1 -109 6055 5961 298 328 118 9 chr10 23061921 23062150 -122527138 + MIR SINE MIR 8 261 -1 204 256 0 49 chr10 23062235 23062317 -122526971 + L2 LINE L2 1358 1435 -1879 236 320 126 26 chr10 23062574 23062843 -122526445 + L2 LINE L2 2009 2304 -1010 567 292 129 10 chr10 23062887 23063096 -122526192 - MIR SINE MIR -24 238 5 2240 85 3 3 chr10 23063254 23063561 -122525727 - AluSp SINE Alu 0 307 1 1408 180 0 78 chr10 23063818 23063961 -122525327 - L1M LINE L1 -743 5403 5250 2370 102 0 3 chr10 23063961 23064274 -122525014 - AluSx SINE Alu 0 312 1 1408 180 0 78 chr10 23064274 23064520 -122524768 - L1M LINE L1 -896 5250 5058 2350 213 57 6 chr10 23064542 23065080 -122524208 - L1M4 LINE L1 -1657 4489 3909 2120 116 3 0 chr10 23065080 23065373 -122523915 - AluSx SINE Alu -18 294 1 2350 213 57 6 chr10 23065373 23065502 -122523786 - L1M4 LINE L1 -2237 3909 3788 756 198 56 6 chr10 23065510 23065672 -122523616 - FRAM SINE Alu -7 169 1 2924 222 58 33 chr10 23065672 23066321 -122522967 - L1M4 LINE L1 -2352 3794 3163 2263 137 89 5 chr10 23066321 23066716 -122522572 - MSTA LTR MaLR 0 428 1 2924 222 58 33 chr10 23066716 23067392 -122521896 - L1M4 LINE L1 -2983 3163 2362 2801 0 0 0 chr10 23067435 23067735 -122521553 + AluYa5 SINE Alu 1 300 -11 2142 78 0 11 chr10 23068082 23068352 -122520936 - AluY SINE Alu -44 267 1 225 0 0 0 chr10 23068907 23068932 -122520356 + (T)n Simple_repeat Simple_repeat 1 25 0 358 274 32 0 chr10 23069776 23069871 -122519417 + L3 LINE CR1 1307 1404 -173 199 258 202 45 chr10 23071281 23071370 -122517918 + MIR SINE MIR 37 139 -69 230 278 116 46 chr10 23071443 23071481 -122517807 - MIR3 SINE MIR -63 145 111 2200 115 0 20 chr10 23071481 23071785 -122517503 + AluSx SINE Alu 1 298 -14 230 278 116 46 chr10 23071785 23071920 -122517368 - MIR3 SINE MIR -97 111 3 39762 60 4 4 chr10 23072185 23075016 -122514272 + L1PA5 LINE L1 2 2832 -3322 2580 43 7 0 chr10 23075016 23075318 -122513970 + AluY SINE Alu 2 305 -6 39762 60 4 4 chr10 23075318 23078639 -122510649 + L1PA5 LINE L1 2831 6154 0 218 338 0 13 chr10 23079334 23079411 -122509877 + GA-rich Low_complexity Low_complexity 4 79 0 333 0 0 0 chr10 23080003 23080040 -122509248 + (TA)n Simple_repeat Simple_repeat 1 37 0 * 351 0 0 0 chr10 23080039 23080078 -122509210 + (GA)n Simple_repeat Simple_repeat 2 40 0 1734 106 57 19 chr10 23080079 23080344 -122508944 - AluSx SINE Alu -35 277 3 2221 125 0 0 chr10 23080621 23080917 -122508371 + AluSx SINE Alu 1 296 -16 333 185 11 22 chr10 23080917 23081009 -122508279 + GA-rich Low_complexity Low_complexity 1 91 0 11054 207 97 37 chr10 23081029 23083303 -122505985 + L1MB8 LINE L1 5 2139 -5043 2198 136 0 0 chr10 23083303 23083613 -122505675 + AluSx SINE Alu 1 310 -2 11054 207 97 37 chr10 23083613 23086050 -122503238 + L1MB8 LINE L1 2139 4426 -2756 2145 119 0 7 chr10 23086050 23086353 -122502935 + AluSx SINE Alu 1 301 -11 11054 207 97 37 chr10 23086353 23086601 -122502687 + L1MB8 LINE L1 4426 4657 -2525 2024 126 11 0 chr10 23086601 23086879 -122502409 + AluSx SINE Alu 3 283 -29 11054 207 97 37 chr10 23086879 23087239 -122502049 + L1MB8 LINE L1 4657 4994 -2188 1669 174 0 24 chr10 23087239 23087526 -122501762 + AluJb SINE Alu 1 280 -32 192 97 0 0 chr10 23087529 23087560 -122501728 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 1761 178 31 3 chr10 23087568 23087861 -122501427 + AluJo SINE Alu 1 301 -11 11054 207 97 37 chr10 23087861 23088422 -122500866 + L1MB8 LINE L1 5001 5526 -1656 1328 187 0 0 chr10 23088422 23088657 -122500631 - MER46A DNA MER2_type 0 236 2 11054 207 97 37 chr10 23088657 23088781 -122500507 + L1MB8 LINE L1 5526 6418 -764 767 212 53 12 chr10 23088773 23089018 -122500270 + L1MB8 LINE L1 6715 6969 -230 * 430 208 148 38 chr10 23089046 23089282 -122500006 + L1MB8 LINE L1 6917 7178 -21 * 4571 170 18 18 chr10 23089226 23089546 -122499742 - L1MB1 LINE L1 -22 6146 5827 2474 84 0 0 chr10 23089546 23089845 -122499443 - AluSx SINE Alu -13 299 1 4571 170 18 18 chr10 23089845 23091057 -122498231 - L1MB1 LINE L1 -341 5827 4618 24 32 0 0 chr10 23091059 23091090 -122498198 + AT_rich Low_complexity Low_complexity 1 31 0 1918 180 35 33 chr10 23091098 23091493 -122497795 + MSTD LTR MaLR 1 396 0 1217 274 74 6 chr10 23091744 23092306 -122496982 + L2 LINE L2 2535 3143 -170 242 320 124 7 chr10 23092465 23092618 -122496670 - MLT1J LTR MaLR -323 188 18 1696 191 3 16 chr10 23092864 23093178 -122496110 - AluJb SINE Alu -2 310 1 363 287 227 0 chr10 23093295 23093595 -122495693 - HAL1 LINE L1 -735 1772 1405 416 279 84 67 chr10 23093837 23094242 -122495046 + L1ME4a LINE L1 5477 5888 -233 340 297 99 42 chr10 23094540 23094732 -122494556 + MIR SINE MIR 19 221 -41 5658 89 49 8 chr10 23094807 23095706 -122493582 + L1PA14 LINE L1 5207 6143 -18 462 36 0 0 chr10 23097165 23097221 -122492067 + (TG)n Simple_repeat Simple_repeat 1 56 0 206 118 0 0 chr10 23097439 23097473 -122491815 + (A)n Simple_repeat Simple_repeat 1 34 0 192 40 0 0 chr10 23098420 23098445 -122490843 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 317 171 129 0 chr10 23098454 23098524 -122490764 + Tigger4(Zombi) DNA MER2_type 1 79 -2652 237 200 0 100 chr10 23098852 23098912 -122490376 - L2 LINE L2 -9 3263 3210 333 0 0 0 chr10 23099015 23099052 -122490236 + (CA)n Simple_repeat Simple_repeat 2 38 0 21 0 0 0 chr10 23100229 23100250 -122489038 + AT_rich Low_complexity Low_complexity 1 21 0 203 191 0 24 chr10 23100708 23100750 -122488538 + GA-rich Low_complexity Low_complexity 4 44 0 22 0 0 0 chr10 23101957 23101979 -122487309 + AT_rich Low_complexity Low_complexity 1 22 0 27 0 0 0 chr10 23102051 23102078 -122487210 + AT_rich Low_complexity Low_complexity 1 27 0 21 0 0 0 chr10 23102822 23102843 -122486445 + AT_rich Low_complexity Low_complexity 1 21 0 27 0 0 0 chr10 23102948 23102975 -122486313 + AT_rich Low_complexity Low_complexity 1 27 0 233 154 122 0 chr10 23103085 23103208 -122486080 + (TA)n Simple_repeat Simple_repeat 2 139 0 778 188 45 122 chr10 23103448 23103735 -122485553 - MLT1B LTR MaLR -125 265 1 3949 202 65 10 chr10 23103807 23104722 -122484566 + HERVL74 LTR ERVL 1134 2098 -3587 881 222 19 5 chr10 23104866 23105078 -122484210 + HERVL74 LTR ERVL 2261 2475 -1081 329 258 33 8 chr10 23105129 23105249 -122484039 + L1M4 LINE L1 5140 5262 -884 * 1688 216 40 47 chr10 23105244 23105636 -122483652 - L1ME LINE L1 -381 5783 5399 2332 108 0 0 chr10 23105636 23105932 -122483356 - AluSg SINE Alu -14 296 1 1688 216 40 47 chr10 23105932 23106122 -122483166 - L1ME LINE L1 -765 5399 5209 732 175 100 38 chr10 23106130 23106290 -122482998 - FRAM SINE Alu -5 171 2 349 252 56 0 chr10 23106320 23106427 -122482861 - L1MD3 LINE L1 -14 7981 7869 748 244 0 0 chr10 23106434 23106590 -122482698 + MLT1F LTR MaLR 7 162 -380 312 27 0 0 chr10 23106592 23106629 -122482659 + (CA)n Simple_repeat Simple_repeat 2 38 0 319 179 0 0 chr10 23106634 23106690 -122482598 - L1MC4 LINE L1 -1339 6703 6648 618 14 0 0 chr10 23106726 23106797 -122482491 + (TC)n Simple_repeat Simple_repeat 2 72 0 228 67 0 0 chr10 23106796 23106826 -122482462 + (TA)n Simple_repeat Simple_repeat 1 30 0 * 406 198 0 22 chr10 23106826 23106917 -122482371 + MLT1F LTR MaLR 165 253 -289 2290 57 30 30 chr10 23106967 23107263 -122482025 - AluY SINE Alu -15 296 1 1398 198 52 27 chr10 23107295 23107623 -122481665 + LTR40b LTR ERVL 127 462 0 1441 263 50 64 chr10 23107624 23108202 -122481086 + HERVL40 LTR ERVL 1 570 -4960 597 237 19 121 chr10 23108253 23108510 -122480778 + HERVL40 LTR ERVL 597 827 -4703 186 158 84 116 chr10 23108510 23108605 -122480683 - MIR SINE MIR -121 141 50 520 255 106 34 chr10 23108610 23108818 -122480470 + HERVL40 LTR ERVL 937 1159 -4371 465 197 8 63 chr10 23108992 23109119 -122480169 + LTR40b LTR ERVL 289 408 -54 548 178 30 30 chr10 23109166 23109301 -122479987 - L1ME LINE L1 -942 5204 5070 2279 73 11 0 chr10 23109323 23109610 -122479678 - AluSq SINE Alu -14 299 10 2287 50 0 21 chr10 23109710 23109990 -122479298 + AluY SINE Alu 32 305 -6 7338 87 22 20 chr10 23110467 23111535 -122477753 + MER11C LTR ERVK 1 1071 0 2107 106 3 10 chr10 23111927 23112219 -122477069 + AluSc SINE Alu 1 290 -19 2303 114 0 0 chr10 23112454 23112760 -122476528 + AluSx SINE Alu 1 306 -6 2173 155 85 19 chr10 23112761 23113244 -122476044 - L1MB8 LINE L1 -24 6154 5640 3727 166 65 55 chr10 23113244 23114147 -122475141 - MER21A LTR ERV1 -6 925 14 214 356 148 15 chr10 23114181 23114316 -122474972 + L2 LINE L2 3116 3268 -4 262 352 14 35 chr10 23114949 23114971 -122474317 - MIR3 SINE MIR -18 190 169 1997 106 29 0 chr10 23114971 23115298 -122473990 + AluSx SINE Alu 1 335 0 262 352 14 35 chr10 23115298 23115416 -122473872 - MIR3 SINE MIR -39 169 52 1484 119 22 9 chr10 23116444 23116670 -122472618 + MER30 DNA MER1_type 1 229 -1 277 158 35 35 chr10 23116827 23116884 -122472404 + L2 LINE L2 3214 3270 -2 3435 197 69 53 chr10 23117518 23117568 -122471720 - L1MB4 LINE L1 0 6180 6132 2096 137 0 9 chr10 23117568 23117883 -122471405 - AluSq SINE Alu -1 312 1 3435 197 69 53 chr10 23117883 23118772 -122470516 - L1MB4 LINE L1 -48 6132 5259 2083 117 3 3 chr10 23118772 23119062 -122470226 + AluSq SINE Alu 12 301 -12 3435 197 69 53 chr10 23119062 23119135 -122470153 - L1MB4 LINE L1 -921 5259 5189 866 165 0 0 chr10 23119135 23119262 -122470026 - FLAM_C SINE Alu -6 127 1 3435 197 69 53 chr10 23119262 23119957 -122469331 - L1MB4 LINE L1 -991 5189 4451 239 287 0 69 chr10 23120092 23120193 -122469095 - L1ME LINE L1 -285 5885 5792 1633 208 112 7 chr10 23120193 23120611 -122468677 - MLT1C LTR MaLR 0 467 6 557 259 77 33 chr10 23120631 23120905 -122468383 - L1ME LINE L1 -342 5779 5494 264 298 21 0 chr10 23121071 23121165 -122468123 - MIR SINE MIR -98 164 69 584 199 23 23 chr10 23121356 23121527 -122467761 - L1MC5 LINE L1 -39 7922 7752 238 341 0 8 chr10 23121563 23121689 -122467599 - L1MB4 LINE L1 -2409 3737 3613 1935 130 7 20 chr10 23121842 23122004 -122467284 - AluSx SINE Alu -16 296 138 2344 79 3 25 chr10 23122004 23122321 -122466967 - AluY SINE Alu 0 311 2 1935 130 7 20 chr10 23122321 23122458 -122466830 - AluSx SINE Alu -174 138 1 315 289 58 8 chr10 23122458 23122689 -122466599 - L1MEc LINE L1 -3861 2354 2150 434 330 107 12 chr10 23123045 23123623 -122465665 - HAL1 LINE L1 -785 1722 1090 329 280 79 37 chr10 23123685 23123874 -122465414 - L1MEc LINE L1 -5193 1012 816 313 282 161 0 chr10 23124043 23124167 -122465121 - L1MEc LINE L1 -5734 471 328 2444 83 0 0 chr10 23124315 23124615 -122464673 + AluY SINE Alu 1 300 -11 392 340 104 24 chr10 23125130 23125551 -122463737 + L2 LINE L2 2201 2655 -659 2078 134 0 3 chr10 23125996 23126302 -122462986 + AluSg SINE Alu 1 305 -5 949 265 43 4 chr10 23126307 23126541 -122462747 + MIR SINE MIR 20 262 0 2437 79 0 0 chr10 23126789 23127094 -122462194 + AluY SINE Alu 1 305 -6 41902 39 2 6 chr10 23127142 23129691 -122459597 + L1PA4 LINE L1 2 2561 -3594 6100 65 14 46 chr10 23129691 23131449 -122457839 + SVA Other Other 3 1385 -1 41902 39 2 6 chr10 23131449 23135071 -122454217 + L1PA4 LINE L1 2561 6155 0 185 298 0 0 chr10 23135132 23135179 -122454109 - L2 LINE L2 -705 2609 2563 207 311 132 33 chr10 23135306 23135518 -122453770 - L2 LINE L2 -932 2382 2150 415 226 83 45 chr10 23135668 23135801 -122453487 + L2 LINE L2 3175 3312 -1 2243 110 3 0 chr10 23136199 23136498 -122452790 - AluY SINE Alu -11 300 1 1841 142 3 42 chr10 23136549 23136665 -122452623 - AluSx SINE Alu -15 297 178 2244 152 22 0 chr10 23136665 23137021 -122452267 + THE1B LTR MaLR 1 364 0 1841 142 3 42 chr10 23137021 23137213 -122452075 - AluSx SINE Alu -134 178 1 1458 168 24 38 chr10 23137559 23137851 -122451437 + AluJb SINE Alu 1 288 -24 2042 104 57 0 chr10 23138163 23138443 -122450845 - AluSg SINE Alu -14 296 1 269 253 6 133 chr10 23138912 23139078 -122450210 + MIR SINE MIR 118 262 0 252 165 237 62 chr10 23139520 23139617 -122449671 - MIR SINE MIR -28 234 121 5314 149 34 26 chr10 23140108 23141355 -122447933 - L1MA4 LINE L1 0 6300 5048 1888 222 73 19 chr10 23141356 23141814 -122447474 + L1MB5 LINE L1 2551 3061 -3085 2323 112 0 10 chr10 23141814 23142126 -122447162 + AluSx SINE Alu 1 309 -3 1888 222 73 19 chr10 23142126 23142361 -122446927 + L1MB5 LINE L1 3061 3282 -2864 5692 199 48 39 chr10 23142361 23144579 -122444709 + L1MB5 LINE L1 3578 5776 -398 2504 71 3 0 chr10 23144579 23144889 -122444399 + AluY SINE Alu 1 311 0 378 0 0 0 chr10 23144899 23144941 -122444347 + (CA)n Simple_repeat Simple_repeat 2 43 0 5692 199 48 39 chr10 23144941 23145303 -122443985 + L1MB5 LINE L1 5784 6174 0 519 225 35 31 chr10 23145307 23145502 -122443786 + L1ME LINE L1 5423 5615 -506 224 178 133 0 chr10 23145503 23145548 -122443740 + L2 LINE L2 3258 3308 -5 239 326 87 33 chr10 23145692 23145784 -122443504 + MIR SINE MIR 29 125 -137 1674 96 27 0 chr10 23146403 23146623 -122442665 + AluSg/x SINE Alu 86 311 -1 180 0 0 0 chr10 23147157 23147177 -122442111 + (A)n Simple_repeat Simple_repeat 1 20 0 21 36 0 0 chr10 23147663 23147691 -122441597 + AT_rich Low_complexity Low_complexity 1 28 0 1477 178 56 86 chr10 23148990 23149434 -122439854 - MER63B DNA MER1_type 0 436 6 2140 116 3 3 chr10 23149548 23149842 -122439446 - AluSx SINE Alu -18 294 1 1410 116 0 0 chr10 23150479 23150693 -122438595 + AluSc SINE Alu 98 311 0 236 241 17 0 chr10 23151376 23151434 -122437854 - 5S rRNA rRNA -29 92 34 22 70 0 0 chr10 23151596 23151639 -122437649 + AT_rich Low_complexity Low_complexity 1 43 0 310 242 121 0 chr10 23152154 23152245 -122437043 + MIR SINE MIR 128 229 -33 2325 96 3 0 chr10 23152596 23152889 -122436399 - AluSx SINE Alu -18 294 1 2073 104 0 11 chr10 23153221 23153544 -122435744 + AluSg SINE Alu 5 324 0 752 105 65 0 chr10 23153821 23153945 -122435343 - MLT1C LTR MaLR -335 132 1 346 238 101 70 chr10 23154034 23154261 -122435027 + L1ME1 LINE L1 2060 2293 -4103 4003 83 3 23 chr10 23154264 23154707 -122434581 + MER41A LTR ERV1 1 433 -121 2242 85 3 0 chr10 23154707 23155024 -122434264 - AluSp SINE Alu 0 318 1 4003 83 3 23 chr10 23155024 23155144 -122434144 + MER41A LTR ERV1 433 554 0 2220 123 0 0 chr10 23155234 23155535 -122433753 - AluSx SINE Alu -11 301 1 561 269 164 2 chr10 23155552 23155657 -122433631 + L1ME1 LINE L1 3052 3139 -3076 2353 94 3 0 chr10 23155657 23155966 -122433322 + AluSp SINE Alu 1 310 -3 561 269 164 2 chr10 23155966 23156262 -122433026 + L1ME1 LINE L1 3139 3518 -2697 1230 246 83 16 chr10 23156275 23156723 -122432565 + L1ME1 LINE L1 3678 4155 -2060 1502 161 3 71 chr10 23156726 23157050 -122432238 + AluJb SINE Alu 1 302 -10 2557 241 50 25 chr10 23157052 23157146 -122432142 + L1ME1 LINE L1 5017 5107 -1128 2070 107 0 4 chr10 23157146 23157452 -122431836 + AluY SINE Alu 1 305 0 2557 241 50 25 chr10 23157452 23158506 -122430782 + L1ME1 LINE L1 5107 6191 -44 398 274 0 25 chr10 23158403 23158560 -122430728 + L1MA10 LINE L1 6248 6400 -3 * 2293 122 0 0 chr10 23158659 23158962 -122430326 + AluSx SINE Alu 1 303 -9 1410 275 73 14 chr10 23159101 23160142 -122429146 + L1M4 LINE L1 2225 3326 -2820 429 237 30 46 chr10 23160144 23160275 -122429013 - MER3 DNA MER1_type -1 208 80 1340 119 19 5 chr10 23160386 23160596 -122428692 + MER41E LTR ERV1 1 213 -299 2470 80 0 13 chr10 23160596 23160908 -122428380 + AluSx SINE Alu 1 308 -4 723 184 75 128 chr10 23160908 23160932 -122428356 + L1MD2 LINE L1 5724 5748 -611 2335 88 7 0 chr10 23160932 23161229 -122428059 - AluSp SINE Alu -14 299 1 723 184 75 128 chr10 23161229 23161509 -122427779 + L1MD2 LINE L1 5748 6012 -347 4734 123 31 89 chr10 23161511 23161976 -122427312 + MER4D LTR ERV1 1 454 -449 412 119 0 0 chr10 23161976 23162043 -122427245 + Alu SINE Alu 237 303 -9 4734 123 31 89 chr10 23162043 23162469 -122426819 + MER4D LTR ERV1 454 903 0 267 298 26 18 chr10 23162469 23162583 -122426705 + L1MD2 LINE L1 6019 6133 -226 536 213 37 37 chr10 23162594 23162758 -122426530 + L1MD2 LINE L1 6196 6359 0 533 266 77 40 chr10 23162763 23163116 -122426172 + L1M4 LINE L1 3633 3998 -2148 3097 200 103 84 chr10 23163135 23163298 -122425990 + L1ME3A LINE L1 5 163 -6379 1875 167 3 6 chr10 23163298 23163610 -122425678 + AluJo SINE Alu 1 311 -1 3097 200 103 84 chr10 23163610 23164467 -122424821 + L1ME3A LINE L1 163 1002 -5540 1715 153 47 0 chr10 23164467 23164741 -122424547 - AluSx SINE Alu -25 287 1 3097 200 103 84 chr10 23164741 23164880 -122424408 + L1ME3A LINE L1 1002 1137 -5405 2141 105 17 3 chr10 23164880 23165176 -122424112 - AluSx SINE Alu -12 300 1 3097 200 103 84 chr10 23165176 23165647 -122423641 + L1ME3A LINE L1 1137 1675 -4867 1966 172 91 35 chr10 23165647 23166111 -122423177 + LTR2B LTR ERV1 1 490 0 1414 236 184 22 chr10 23166111 23166789 -122422499 + L1ME3A LINE L1 1672 2459 -4187 * 1748 213 41 61 chr10 23166771 23166940 -122422348 + L1MB7 LINE L1 5649 5820 -364 1536 172 6 57 chr10 23166940 23167254 -122422034 + AluJo SINE Alu 1 298 -14 1748 213 41 61 chr10 23167254 23167623 -122421665 + L1MB7 LINE L1 5820 6176 -8 2105 123 0 22 chr10 23167669 23167986 -122421302 - AluSx SINE Alu -1 311 2 1417 206 0 0 chr10 23168009 23168262 -122421026 - AluJo SINE Alu -59 253 1 1192 278 110 30 chr10 23168309 23168450 -122420838 + L1ME3A LINE L1 4550 4678 -1986 2039 141 3 0 chr10 23168450 23168747 -122420541 + AluSx SINE Alu 1 298 -14 1192 278 110 30 chr10 23168747 23168922 -122420366 + L1ME3A LINE L1 4678 4838 -1826 1990 135 7 3 chr10 23168922 23169218 -122420070 - AluSx SINE Alu -15 297 1 1192 278 110 30 chr10 23169218 23169802 -122419486 + L1ME3A LINE L1 4838 5374 -1290 1595 208 3 0 chr10 23169802 23170090 -122419198 + AluJb SINE Alu 4 292 -20 228 67 0 0 chr10 23170090 23170120 -122419168 + (TA)n Simple_repeat Simple_repeat 2 31 0 1192 278 110 30 chr10 23170120 23170564 -122418724 + L1ME3A LINE L1 5373 6082 -582 1079 169 94 0 chr10 23170565 23170778 -122418510 - Tigger2 DNA MER2_type 0 2718 2486 4172 160 23 12 chr10 23170835 23171571 -122417717 - Tigger2 DNA MER2_type -1974 744 1 860 277 146 17 chr10 23171617 23172028 -122417260 + L1ME3A LINE L1 6154 6617 -51 14274 137 29 29 chr10 23172029 23172148 -122417140 - Tigger1 DNA MER2_type 0 2418 2300 2152 118 0 0 chr10 23172148 23172437 -122416851 + AluSx SINE Alu 1 289 -23 14274 137 29 29 chr10 23172437 23174679 -122414609 - Tigger1 DNA MER2_type -118 2300 54 2330 92 0 0 chr10 23174679 23174973 -122414315 + AluY SINE Alu 1 294 -17 14274 137 29 29 chr10 23174973 23175012 -122414276 - Tigger1 DNA MER2_type -2363 55 17 1692 186 0 0 chr10 23175779 23176058 -122413230 + AluSx SINE Alu 6 284 -28 396 0 0 0 chr10 23176058 23176102 -122413186 + (CA)n Simple_repeat Simple_repeat 2 45 0 2016 201 81 3 chr10 23176311 23176695 -122412593 - MER47B DNA MER2_type -3 415 2 302 313 112 0 chr10 23176720 23176854 -122412434 + L1MC/D LINE L1 4903 5051 -1095 455 289 74 42 chr10 23177039 23177351 -122411937 + L1MC/D LINE L1 5308 5629 -2179 208 147 0 0 chr10 23177380 23177414 -122411874 + (TATG)n Simple_repeat Simple_repeat 1 34 0 15208 177 38 14 chr10 23177676 23181703 -122407585 + L1PA13 LINE L1 1981 6113 -50 2358 148 52 2 chr10 23181816 23182222 -122407066 - MSTA LTR MaLR 0 428 3 6772 209 163 35 chr10 23182347 23182941 -122406347 + L1MDa LINE L1 94 611 -5929 2131 113 0 26 chr10 23182941 23183251 -122406037 + AluSx SINE Alu 6 307 -5 6772 209 163 35 chr10 23183251 23183715 -122405573 + L1MDa LINE L1 611 1014 -5526 2264 112 3 0 chr10 23183715 23184018 -122405270 + AluSx SINE Alu 1 304 -8 6772 209 163 35 chr10 23184018 23185154 -122404134 + L1MDa LINE L1 1014 2569 -3971 234 0 0 0 chr10 23185163 23185189 -122404099 + (CA)n Simple_repeat Simple_repeat 2 27 0 4162 252 40 41 chr10 23185243 23186151 -122403137 + L1MDa LINE L1 2486 3393 -3147 1999 139 10 3 chr10 23186151 23186454 -122402834 + AluSx SINE Alu 1 305 -7 4162 252 40 41 chr10 23186454 23187095 -122402193 + L1MDa LINE L1 3393 4001 -2539 2071 140 0 7 chr10 23187095 23187395 -122401893 + AluSq SINE Alu 1 298 -15 4162 252 40 41 chr10 23187395 23187483 -122401805 + L1MDa LINE L1 4001 4088 -2452 1267 181 47 106 chr10 23187483 23187870 -122401418 + MLT1A1 LTR MaLR 2 365 0 7377 209 58 28 chr10 23187870 23189551 -122399737 + MLT1A1-int LTR MaLR 1 1731 -4 1137 185 41 123 chr10 23189563 23189953 -122399335 + MLT1A1 LTR MaLR 1 358 -7 1038 236 30 27 chr10 23189956 23190257 -122399031 + L1MDa LINE L1 4085 4386 -2154 724 147 147 12 chr10 23190269 23190536 -122398752 + MER1B DNA MER1_type 1 339 0 1880 233 29 14 chr10 23190543 23191105 -122398183 + L1MDa LINE L1 4398 4967 -1573 1269 165 169 0 chr10 23191110 23191358 -122397930 + Tigger3(Golem) DNA MER2_type 2 291 -2738 1331 126 0 74 chr10 23191358 23191589 -122397699 - AluSq SINE Alu -12 301 88 329 136 0 0 chr10 23191594 23191653 -122397635 + Tigger3(Golem) DNA MER2_type 282 340 -2689 3396 240 47 14 chr10 23191658 23192512 -122396776 + L1PA12 LINE L1 11 892 -6689 686 241 40 45 chr10 23192503 23192702 -122396586 - L1PA12 LINE L1 -6774 807 610 * 860 110 45 19 chr10 23192720 23192867 -122396421 - Tigger3(Golem) DNA MER2_type -325 2704 2551 2281 123 0 0 chr10 23192867 23193176 -122396112 + AluSx SINE Alu 1 309 -3 27 0 0 0 chr10 23194758 23194785 -122394503 + AT_rich Low_complexity Low_complexity 1 27 0 2039 105 50 0 chr10 23195134 23195411 -122393877 - AluSx SINE Alu -21 291 1 25 31 0 0 chr10 23195610 23195642 -122393646 + AT_rich Low_complexity Low_complexity 1 32 0 2186 95 30 0 chr10 23195730 23196025 -122393263 - AluSq SINE Alu -9 304 1 299 267 218 0 chr10 23196385 23196486 -122392802 - L2 LINE L2 0 3272 3150 252 233 17 0 chr10 23196499 23196559 -122392729 + MLT1A1 LTR MaLR 1 61 -444 483 187 22 65 chr10 23196560 23196699 -122392589 - L2 LINE L2 -69 3244 3112 22 0 0 0 chr10 23197273 23197295 -122391993 + AT_rich Low_complexity Low_complexity 1 22 0 243 250 89 0 chr10 23198493 23198549 -122390739 + L2 LINE L2 3204 3264 -8 1006 261 4 8 chr10 23199429 23199689 -122389599 + MIR SINE MIR 1 259 -3 317 332 153 37 chr10 23200232 23200500 -122388788 + L3 LINE CR1 1042 1340 -237 1979 133 0 3 chr10 23200501 23200787 -122388501 + AluSx SINE Alu 1 285 -27 587 62 83 3 chr10 23200795 23201086 -122388202 + (TA)n Simple_repeat Simple_repeat 1 314 0 267 299 0 0 chr10 23201086 23201153 -122388135 + L3 LINE CR1 1366 1432 -145 272 213 33 0 chr10 23201452 23201513 -122387775 + L2 LINE L2 3210 3272 0 2225 108 0 7 chr10 23201690 23201997 -122387291 - AluSx SINE Alu -7 305 1 322 198 151 38 chr10 23202293 23202399 -122386889 + L2 LINE L2 3192 3309 -4 327 304 60 29 chr10 23202440 23202620 -122386668 + MLT1J2 LTR MaLR 67 245 -164 2018 115 35 0 chr10 23202925 23203213 -122386075 - AluSx SINE Alu -12 300 3 1544 117 49 12 chr10 23203369 23203616 -122385672 + L1PA10 LINE L1 5891 6146 -22 619 148 23 0 chr10 23203618 23203632 -122385656 + GA-rich Low_complexity Low_complexity 1 13 -242 611 26 13 0 chr10 23203632 23203709 -122385579 + (GGAGA)n Simple_repeat Simple_repeat 2 79 0 619 148 23 0 chr10 23203709 23203868 -122385420 + GA-rich Low_complexity Low_complexity 13 255 0 365 123 0 0 chr10 23203868 23203925 -122385363 + (GGAA)n Simple_repeat Simple_repeat 2 58 0 242 250 161 27 chr10 23204433 23204506 -122384782 - L3 LINE CR1 -19 1558 1496 1812 159 19 30 chr10 23204506 23204876 -122384412 + MER47A DNA MER2_type 1 366 0 242 250 161 27 chr10 23204876 23204914 -122384374 - L3 LINE CR1 -81 1496 1432 246 143 16 32 chr10 23204964 23205027 -122384261 + T-rich Low_complexity Low_complexity 3 64 0 401 285 60 33 chr10 23205028 23205179 -122384109 + MIR3 SINE MIR 47 201 -7 552 240 138 30 chr10 23205974 23206307 -122382981 + L1MC5 LINE L1 7557 7925 -36 803 317 117 41 chr10 23206732 23207169 -122382119 + L1M4 LINE L1 2223 2625 -3521 2470 77 0 0 chr10 23207169 23207480 -122381808 + AluY SINE Alu 1 311 0 803 317 117 41 chr10 23207480 23208019 -122381269 + L1M4 LINE L1 2625 3273 -2873 185 135 243 0 chr10 23208033 23208070 -122381218 + MIR SINE MIR 98 143 -119 307 263 16 78 chr10 23208615 23208771 -122380517 - MLT2E LTR ERVL -361 162 19 402 48 81 0 chr10 23209356 23209418 -122379870 + L1MA9 LINE L1 6245 6311 -1 327 359 101 29 chr10 23209450 23209726 -122379562 - L2 LINE L2 -800 2514 2219 256 327 222 33 chr10 23209762 23210279 -122379009 - L2 LINE L2 -1265 2049 1435 1918 107 33 0 chr10 23210683 23210954 -122378334 - AluY SINE Alu 0 311 32 1416 218 9 88 chr10 23210991 23211446 -122377842 + L1ME LINE L1 5360 5778 -392 1037 209 142 29 chr10 23211452 23211763 -122377525 + MLT1A1 LTR MaLR 1 346 -19 284 152 0 0 chr10 23211909 23211955 -122377333 + Tigger2 DNA MER2_type 2 47 -2671 511 202 0 11 chr10 23212056 23212150 -122377138 + Tigger2 DNA MER2_type 2611 2703 -15 1286 104 0 0 chr10 23212544 23212707 -122376581 - AluSg/x SINE Alu -13 297 135 1350 143 196 14 chr10 23212960 23213240 -122376048 + MER44D DNA MER2_type 9 609 0 2273 106 3 6 chr10 23213858 23214169 -122375119 - AluSq SINE Alu -3 310 1 511 86 14 0 chr10 23214496 23214566 -122374722 - AluJ/FRAM SINE Alu -18 294 224 5621 144 9 1 chr10 23214573 23215453 -122373835 + Tigger1 DNA MER2_type 28 914 -1504 2055 85 4 0 chr10 23215526 23215785 -122373503 + AluSg SINE Alu 34 293 -17 1926 126 4 7 chr10 23216935 23217213 -122372075 + AluSx SINE Alu 4 280 -32 204 40 0 0 chr10 23217213 23217238 -122372050 + (CAAT)n Simple_repeat Simple_repeat 4 28 0 574 106 11 53 chr10 23217240 23217334 -122371954 - FLAM_A SINE Alu -25 117 28 23 54 0 0 chr10 23217578 23217615 -122371673 + AT_rich Low_complexity Low_complexity 1 37 0 26 30 0 0 chr10 23217994 23218027 -122371261 + AT_rich Low_complexity Low_complexity 1 33 0 276 100 0 0 chr10 23218278 23218318 -122370970 + (A)n Simple_repeat Simple_repeat 1 40 0 22 35 0 0 chr10 23219809 23219838 -122369450 + AT_rich Low_complexity Low_complexity 1 29 0 751 172 0 0 chr10 23221479 23221601 -122367687 + FLAM_A SINE Alu 1 122 -11 207 0 0 0 chr10 23221604 23221627 -122367661 + (TTAAA)n Simple_repeat Simple_repeat 3 25 0 2541 49 13 0 chr10 23221829 23222133 -122367155 + AluY SINE Alu 1 308 -3 23 54 0 0 chr10 23222614 23222651 -122366637 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr10 23223993 23224014 -122365274 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr10 23227632 23227655 -122361633 + AT_rich Low_complexity Low_complexity 1 23 0 24 100 0 0 chr10 23229507 23229587 -122359701 + AT_rich Low_complexity Low_complexity 1 80 0 1711 150 0 62 chr10 23230509 23230815 -122358473 - AluJo SINE Alu -25 287 1 248 296 0 0 chr10 23230817 23230871 -122358417 - Tigger3(Golem) DNA MER2_type -2975 54 1 2394 209 28 4 chr10 23230925 23231461 -122357827 + L1MB7 LINE L1 5627 6175 -9 1603 168 66 0 chr10 23231481 23231755 -122357533 - AluJb SINE Alu -20 292 1 515 212 49 108 chr10 23233029 23233232 -122356056 - MER112 DNA MER1_type -12 248 58 1986 122 11 0 chr10 23235492 23235778 -122353510 - AluSx SINE Alu -23 289 1 1792 152 10 21 chr10 23237558 23237848 -122351440 + AluJb SINE Alu 1 287 -25 458 237 59 30 chr10 23237910 23238079 -122351209 + L1M4 LINE L1 5 178 -6364 330 261 152 43 chr10 23238147 23238285 -122351003 + L1M4 LINE L1 330 482 -6060 667 102 213 0 chr10 23238295 23238403 -122350885 - AluJb SINE Alu -181 131 1 625 93 187 13 chr10 23238490 23238640 -122350648 + Tigger3(Golem) DNA MER2_type 2385 2560 -469 1049 76 0 182 chr10 23238647 23238883 -122350405 + 7SK RNA RNA 1 193 0 4149 221 56 43 chr10 23238883 23239185 -122350103 + L1M4 LINE L1 541 838 -5808 6358 120 88 22 chr10 23239185 23240337 -122348951 + Tigger3b DNA MER2_type 2 1230 -1 4149 221 56 43 chr10 23240337 23241538 -122347750 + L1M4 LINE L1 838 2081 -4565 1829 139 91 15 chr10 23241538 23241877 -122347411 + MLT1A1 LTR MaLR 1 365 0 4149 221 56 43 chr10 23241877 23242521 -122346767 + L1M4 LINE L1 2081 2715 -3931 701 215 56 0 chr10 23242524 23242668 -122346620 - MER6 DNA MER2_type 0 865 -7 2684 211 47 16 chr10 23242711 23243412 -122345876 + L1M4 LINE L1 2718 3440 -3204 331 214 65 78 chr10 23243741 23243895 -122345393 + L1M4 LINE L1 3418 3569 -3075 22 0 0 0 chr10 23243963 23243985 -122345303 + AT_rich Low_complexity Low_complexity 1 22 0 1166 195 28 0 chr10 23243986 23244201 -122345087 - MER58A DNA MER1_type 0 224 4 2165 94 0 3 chr10 23244377 23244692 -122344596 - AluSc SINE Alu 0 309 1 1733 137 63 19 chr10 23244912 23245278 -122344010 + Tigger3(Golem) DNA MER2_type 1 3028 -1 180 0 0 0 chr10 23245447 23245467 -122343821 + (A)n Simple_repeat Simple_repeat 1 20 0 21 0 0 0 chr10 23245641 23245662 -122343626 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr10 23245718 23245746 -122343542 + AT_rich Low_complexity Low_complexity 1 28 0 2422 47 0 56 chr10 23246473 23246795 -122342493 + AluY SINE Alu 1 304 -7 207 0 0 0 chr10 23248326 23248349 -122340939 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 233 247 129 41 chr10 23248790 23248960 -122340328 - L1MC/D LINE L1 -1961 5847 5663 292 254 254 0 chr10 23249038 23249160 -122340128 - MER112 DNA MER1_type -96 164 12 261 200 67 83 chr10 23249224 23249344 -122339944 - L1P3 LINE L1 -512 5660 5543 2194 107 7 0 chr10 23249535 23249844 -122339444 - AluSx SINE Alu -1 311 1 195 129 0 0 chr10 23249897 23249928 -122339360 + (T)n Simple_repeat Simple_repeat 1 31 0 294 330 160 15 chr10 23250261 23250467 -122338821 - L3 LINE CR1 -92 1485 1250 1133 192 64 0 chr10 23251340 23251574 -122337714 + MER5C DNA MER1_type 1 249 -75 676 181 0 45 chr10 23252603 23252758 -122336530 + L1MA9 LINE L1 6156 6303 -9 1628 231 132 14 chr10 23253921 23254422 -122334866 - HsTC2 DNA Tc2 -22 1876 1317 2188 120 0 7 chr10 23254422 23254723 -122334565 - AluSx SINE Alu -11 301 3 280 274 0 118 chr10 23254760 23254855 -122334433 - HsTC2 DNA Tc2 -1751 147 71 2410 75 0 10 chr10 23254855 23255160 -122334128 + AluY SINE Alu 1 302 -9 280 274 0 118 chr10 23255160 23255199 -122334089 - HsTC2 DNA Tc2 -1827 71 29 394 292 139 0 chr10 23255251 23255395 -122333893 + MIR SINE MIR 75 238 -24 252 283 62 26 chr10 23255720 23255833 -122333455 + MLT1J1 LTR MaLR 59 175 -271 454 226 29 29 chr10 23255934 23256071 -122333217 + MLT1J LTR MaLR 374 510 -1 483 170 19 38 chr10 23256163 23256269 -122333019 + L1MC4a LINE L1 6731 6834 -974 * 1294 223 94 12 chr10 23256267 23256608 -122332680 + L1ME1 LINE L1 5794 6162 -4 210 143 0 0 chr10 23256634 23256669 -122332619 + (A)n Simple_repeat Simple_repeat 1 35 0 2136 122 0 6 chr10 23256678 23256990 -122332298 + AluSq SINE Alu 1 310 -3 3098 219 121 15 chr10 23256998 23257725 -122331563 + L1MC4a LINE L1 6849 7684 -124 3203 126 76 2 chr10 23257725 23258241 -122331047 - MER41C LTR ERV1 0 554 1 3098 219 121 15 chr10 23258241 23258381 -122330907 + L1MC4a LINE L1 7684 7808 0 422 249 57 57 chr10 23258398 23258643 -122330645 + L1MEd LINE L1 960 1204 -4915 232 325 93 38 chr10 23258698 23258935 -122330353 + HAL1 LINE L1 1413 1662 -845 1831 149 17 7 chr10 23259156 23259458 -122329830 + AluJb SINE Alu 3 307 -5 300 232 58 32 chr10 23259866 23260021 -122329267 + L1MEd LINE L1 2114 2272 -3857 1848 129 7 7 chr10 23260129 23260424 -122328864 - MER41-int LTR ERV1 -2456 3490 3196 1326 136 0 76 chr10 23260955 23261205 -122328083 + AluJb SINE Alu 74 304 -8 1600 259 72 2 chr10 23261365 23261870 -122327418 - L2 LINE L2 0 3313 2776 4823 155 24 17 chr10 23261914 23262749 -122326539 - L1MB4 LINE L1 -12 6168 5323 562 67 0 44 chr10 23262749 23262839 -122326449 - L1PA8 LINE L1 -6 6166 6081 4823 155 24 17 chr10 23262839 23262960 -122326328 - L1MB4 LINE L1 -857 5323 5204 1094 201 96 12 chr10 23262966 23263215 -122326073 - AluJb SINE Alu -22 290 21 250 242 50 8 chr10 23263255 23263375 -122325913 - L1M4c LINE L1 -4041 2343 2219 288 200 15 0 chr10 23263396 23263461 -122325827 + L1M4c LINE L1 2135 2200 -4184 1132 217 104 41 chr10 23263462 23263780 -122325508 - L2 LINE L2 -534 2780 2443 2059 130 16 0 chr10 23263851 23264158 -122325130 - AluSx SINE Alu 0 312 1 2054 136 0 10 chr10 23264239 23264540 -122324748 + AluSx SINE Alu 1 298 -14 658 142 0 99 chr10 23264904 23264941 -122324347 + L1MB7 LINE L1 5915 5954 -230 2208 87 7 0 chr10 23264941 23265241 -122324047 + AluY SINE Alu 1 302 -9 658 142 0 99 chr10 23265241 23265253 -122324035 + L1MB7 LINE L1 5954 5966 -218 658 196 40 0 chr10 23265253 23265401 -122323887 + L1MB7 LINE L1 6022 6175 -9 2251 82 17 0 chr10 23266477 23266769 -122322519 + AluSg SINE Alu 1 297 -13 297 0 0 0 chr10 23266812 23266845 -122322443 + (TG)n Simple_repeat Simple_repeat 2 34 0 468 214 84 65 chr10 23266876 23267030 -122322258 - L2 LINE L2 -597 2717 2561 379 202 16 0 chr10 23267033 23267157 -122322131 + (TA)n Simple_repeat Simple_repeat 1 126 0 1813 198 32 11 chr10 23267274 23267648 -122321640 + MSTD LTR MaLR 4 385 -11 689 140 118 38 chr10 23267945 23268131 -122321157 + L1MA8 LINE L1 6088 6288 -3 1126 129 60 51 chr10 23268499 23268716 -122320572 + MER20 DNA MER1_type 1 219 0 779 216 100 29 chr10 23268719 23268960 -122320328 + MIR SINE MIR 5 262 0 285 98 0 0 chr10 23269802 23269843 -122319445 + (T)n Simple_repeat Simple_repeat 1 41 0 8686 94 4 3 chr10 23370049 23371236 -122218052 + L1PA7 LINE L1 365 1552 -4594 * 40646 55 46 2 chr10 23371217 23376710 -122212578 + L1P1 LINE L1 1 5740 -415 4835 91 6 1 chr10 23376819 23377470 -122211818 + L1PA2 LINE L1 5500 6153 -2 26967 69 47 1 chr10 23377490 23381664 -122207624 + L1PA7 LINE L1 1522 5892 -262 2099 91 3 18 chr10 23381818 23382103 -122207185 + L1PA7 LINE L1 5870 6150 -4 1884 155 7 3 chr10 23382319 23382616 -122206672 + AluJb SINE Alu 1 298 -14 240 220 0 20 chr10 23382792 23382842 -122206446 + L2 LINE L2 3244 3292 -21 215 289 26 13 chr10 23383624 23383700 -122205588 - L2 LINE L2 0 3272 3196 487 329 56 9 chr10 23383718 23383934 -122205354 + MLT1J LTR MaLR 286 511 0 1675 167 0 16 chr10 23384940 23385251 -122204037 - L1P LINE L1 -5840 306 1 430 261 49 20 chr10 23385342 23385545 -122203743 - L1ME4a LINE L1 -169 5952 5744 717 180 58 58 chr10 23385750 23385939 -122203349 - MER53 DNA DNA 0 189 1 369 216 155 26 chr10 23385967 23386083 -122203205 - L1ME4a LINE L1 -603 5518 5388 965 321 70 40 chr10 23386543 23387125 -122202163 + L2 LINE L2 2267 2866 -448 1747 168 0 7 chr10 23388378 23388670 -122200618 + AluJo SINE Alu 17 306 -6 1639 148 0 72 chr10 23388934 23389239 -122200049 + AluJo SINE Alu 2 284 -28 609 264 22 48 chr10 23389380 23389611 -122199677 + AluJo SINE Alu 2 226 -86 402 94 0 0 chr10 23390178 23390231 -122199057 - Alu SINE Alu -25 287 235 226 113 16 145 chr10 23390686 23390748 -122198540 - MER20B DNA MER1_type -653 130 77 816 152 0 43 chr10 23391116 23391254 -122198034 - FLAM_C SINE Alu -1 132 1 2043 143 0 6 chr10 23392294 23392608 -122196680 - AluSx SINE Alu 0 312 1 646 175 42 0 chr10 23392672 23392792 -122196496 - L1MA5A LINE L1 -1 6296 6172 1880 148 24 7 chr10 23392792 23393082 -122196206 - AluJb SINE Alu -7 305 11 1262 113 90 143 chr10 23393085 23393386 -122195902 + LTR12 LTR ERV1 1 285 -429 342 214 11 0 chr10 23393387 23393476 -122195812 + LTR30 LTR ERV1 553 642 -80 707 155 18 22 chr10 23393476 23393616 -122195672 + LTR12 LTR ERV1 300 584 -130 * 27632 112 13 16 chr10 23393598 23398426 -122190862 + HERV9 LTR ERV1 54 4953 -3446 4964 111 48 14 chr10 23398403 23399359 -122189929 + HERV9 LTR ERV1 709 1740 -5156 * 5294 119 11 4 chr10 23399369 23400134 -122189154 + HERV9 LTR ERV1 7630 8399 0 1042 132 7 19 chr10 23400324 23400514 -122188774 + LTR12 LTR ERV1 72 1984 -454 345 142 52 164 chr10 23400485 23400619 -122188669 + LTR12 LTR ERV1 159 277 -437 * 330 263 10 0 chr10 23400619 23400718 -122188570 + LTR30 LTR ERV1 544 643 -79 745 99 0 0 chr10 23400719 23400820 -122188468 + LTR12 LTR ERV1 481 581 -133 2756 108 69 77 chr10 23400828 23401336 -122187952 - L1MA5A LINE L1 -121 6176 5673 287 330 26 36 chr10 23401711 23401905 -122187383 + L2 LINE L2 2552 2743 -571 2370 96 0 0 chr10 23401911 23402214 -122187074 + AluY SINE Alu 1 303 -8 1102 285 38 12 chr10 23402290 23402690 -122186598 - L1M4 LINE L1 -1805 4405 3996 22 35 0 0 chr10 23402719 23402748 -122186540 + AT_rich Low_complexity Low_complexity 1 29 0 1412 204 20 30 chr10 23402886 23403185 -122186103 - AluJo SINE Alu -16 296 1 3540 165 47 45 chr10 23403186 23404379 -122184909 - L1MA9 LINE L1 -346 5966 4757 * 4549 142 29 31 chr10 23404373 23404481 -122184807 - L1MA9 LINE L1 -1622 4524 4417 1620 173 48 7 chr10 23404481 23404781 -122184507 + AluJo SINE Alu 1 311 0 4549 142 29 31 chr10 23404781 23405511 -122183777 - L1MA9 LINE L1 -1729 4417 3687 2407 244 82 28 chr10 23405510 23406194 -122183094 - L1M4 LINE L1 -5420 721 1 * 198 0 0 0 chr10 23406601 23406623 -122182665 + (ATG)n Simple_repeat Simple_repeat 3 24 0 6166 119 11 5 chr10 23407458 23408684 -122180604 + L1PA16 LINE L1 4901 6149 -17 2437 101 0 0 chr10 23409616 23409924 -122179364 + AluSx SINE Alu 3 310 -2 2290 145 17 9 chr10 23409941 23410285 -122179003 - MER7A DNA MER2_type 0 346 2 294 125 0 0 chr10 23410705 23410753 -122178535 + (CAT)n Simple_repeat Simple_repeat 3 50 0 282 333 9 9 chr10 23410771 23410879 -122178409 - MIR SINE MIR -14 248 141 461 145 0 0 chr10 23410879 23410941 -122178347 - Alu SINE Alu -17 295 234 192 324 108 22 chr10 23411075 23411214 -122178074 - L2 LINE L2 -1 3271 3121 1098 167 0 0 chr10 23411890 23412052 -122177236 + FRAM SINE Alu 1 162 -4 2229 181 67 31 chr10 23412131 23412651 -122176637 - LTR55 LTR ERV -9 539 1 249 276 133 0 chr10 23412925 23413023 -122176265 + MIR SINE MIR 96 206 -56 2094 189 48 17 chr10 23413456 23413869 -122175419 + MSTB LTR MaLR 1 426 0 297 309 21 0 chr10 23414201 23414295 -122174993 + L2 LINE L2 3218 3313 0 22 35 0 0 chr10 23414631 23414660 -122174628 + AT_rich Low_complexity Low_complexity 1 29 0 2542 176 44 0 chr10 23414712 23415120 -122174168 - MSTB LTR MaLR 0 426 1 4870 137 51 20 chr10 23415274 23415930 -122173358 - L1MA8 LINE L1 -4 6287 5598 2252 55 0 98 chr10 23415930 23416258 -122173030 - AluY SINE Alu -15 296 1 4870 137 51 20 chr10 23416258 23416441 -122172847 - L1MA8 LINE L1 -693 5598 5422 245 208 0 0 chr10 23416441 23416494 -122172794 - AluJ/monomer SINE Alu -9 293 241 1983 111 7 0 chr10 23416616 23416886 -122172402 - AluSx SINE Alu -40 272 1 3063 143 31 44 chr10 23416886 23417522 -122171766 - L1MA8 LINE L1 -728 5440 4803 21 0 0 0 chr10 23418002 23418023 -122171265 + AT_rich Low_complexity Low_complexity 1 21 0 349 269 39 0 chr10 23418264 23418368 -122170920 + LTR16A LTR ERVL 3 110 -340 472 294 12 12 chr10 23418420 23418580 -122170708 + LTR16A LTR ERVL 202 361 -89 417 128 13 39 chr10 23418975 23419053 -122170235 + L1PA16 LINE L1 6091 6166 0 21 0 0 0 chr10 23419593 23419614 -122169674 + AT_rich Low_complexity Low_complexity 1 21 0 431 196 18 62 chr10 23420679 23420791 -122168497 + MIR SINE MIR 109 215 -47 1759 172 0 21 chr10 23420791 23421076 -122168212 + AluJo SINE Alu 1 279 -33 2454 73 0 0 chr10 23421424 23421726 -122167562 - AluY SINE Alu -9 302 1 6158 79 0 4 chr10 23421795 23422188 -122167100 - L1PB1 LINE L1 -5 6146 5753 261 0 0 0 chr10 23422188 23422217 -122167071 + (CA)n Simple_repeat Simple_repeat 2 30 0 6158 79 0 4 chr10 23422217 23423095 -122166193 - L1PB1 LINE L1 -398 5753 4910 1832 166 3 16 chr10 23423681 23423988 -122165300 - AluJo SINE Alu -9 303 1 1735 184 20 0 chr10 23425528 23425827 -122163461 - AluJo SINE Alu -7 305 1 3834 196 78 27 chr10 23426575 23427300 -122161988 + L1MCb LINE L1 4 690 -5874 2396 96 0 0 chr10 23427300 23427603 -122161685 + AluSc SINE Alu 1 303 -6 3834 196 78 27 chr10 23427603 23428155 -122161133 + L1MCb LINE L1 690 1212 -5352 2626 99 6 3 chr10 23428155 23428518 -122160770 - THE1B LTR MaLR 0 364 1 3834 196 78 27 chr10 23428518 23428965 -122160323 + L1MCb LINE L1 1212 1802 -4762 2226 162 23 39 chr10 23429440 23429693 -122159595 - MSTB LTR MaLR 0 426 180 2111 119 0 7 chr10 23429693 23429999 -122159289 + AluSx SINE Alu 2 305 0 2226 162 23 39 chr10 23429999 23430177 -122159111 - MSTB LTR MaLR -246 180 1 204 40 0 0 chr10 23430598 23430623 -122158665 + (CAA)n Simple_repeat Simple_repeat 3 27 0 2140 136 3 7 chr10 23431607 23431917 -122157371 + AluJo SINE Alu 1 309 -3 464 174 9 43 chr10 23432028 23432143 -122157145 - MER74B LTR ERVL -511 111 1 728 226 132 23 chr10 23432606 23432863 -122156425 + MER87 LTR ERV1 257 541 0 1394 228 58 17 chr10 23432870 23433283 -122156005 + MER74B LTR ERVL 183 612 -10 222 246 0 15 chr10 23434210 23434275 -122155013 + (TATAA)n Simple_repeat Simple_repeat 2 65 0 25 51 0 0 chr10 23434339 23434378 -122154910 + AT_rich Low_complexity Low_complexity 1 39 0 802 294 63 44 chr10 23434882 23435249 -122154039 - L2 LINE L2 -8 3305 2932 4012 232 50 23 chr10 23435317 23435650 -122153638 + L1 LINE L1 2639 2962 -3184 2260 104 0 0 chr10 23435650 23435948 -122153340 + AluY SINE Alu 1 298 -13 4012 232 50 23 chr10 23435948 23436083 -122153205 + L1 LINE L1 2962 3092 -3054 2212 126 10 0 chr10 23436083 23436393 -122152895 + AluSq SINE Alu 1 313 0 4012 232 50 23 chr10 23436393 23437256 -122152032 + L1 LINE L1 3092 4007 -2139 1062 227 60 25 chr10 23437255 23437608 -122151680 - L1M4 LINE L1 -3114 3032 2668 * 340 315 56 5 chr10 23437648 23437864 -122151424 - L1M4 LINE L1 -2205 3941 3715 475 297 115 70 chr10 23438177 23438534 -122150754 - L2 LINE L2 -10 3262 2890 219 150 25 0 chr10 23439310 23439350 -122149938 - L2 LINE L2 -5 3308 3268 201 317 37 49 chr10 23439506 23439670 -122149618 - L2 LINE L2 -410 2904 2743 1569 180 3 27 chr10 23439684 23439978 -122149310 - AluJo SINE Alu -25 287 1 26 0 0 0 chr10 23440003 23440029 -122149259 + AT_rich Low_complexity Low_complexity 1 26 0 29198 120 13 58 chr10 23440029 23446465 -122142823 - L1PA7 LINE L1 -11 6143 12 563 238 46 65 chr10 23446474 23446893 -122142395 - L1MC5 LINE L1 -908 6900 6499 1850 165 7 4 chr10 23447047 23447326 -122141962 + AluJo SINE Alu 6 285 -27 21 0 0 0 chr10 23448506 23448527 -122140761 + AT_rich Low_complexity Low_complexity 1 21 0 343 301 71 0 chr10 23448772 23448885 -122140403 - MIR SINE MIR -19 243 123 9201 154 131 54 chr10 23448974 23450667 -122138621 + L1MCa LINE L1 19 1582 -4844 1500 160 9 0 chr10 23450667 23450898 -122138390 + AluJb SINE Alu 73 305 -7 9201 154 131 54 chr10 23450898 23451067 -122138221 + L1MCa LINE L1 1582 1737 -4689 2143 144 21 0 chr10 23451067 23451406 -122137882 + MER7A DNA MER2_type 2 345 -1 9201 154 131 54 chr10 23451406 23451425 -122137863 + L1MCa LINE L1 1737 1753 -4673 2454 65 0 10 chr10 23451425 23451734 -122137554 - AluY SINE Alu -5 306 1 9201 154 131 54 chr10 23451734 23451999 -122137289 + L1MCa LINE L1 1753 1996 -4430 1483 142 146 8 chr10 23451999 23452253 -122137035 + AluJb SINE Alu 13 301 -11 9201 154 131 54 chr10 23452253 23452596 -122136692 + L1MCa LINE L1 1996 2311 -4115 2172 112 7 0 chr10 23452596 23452891 -122136397 - AluSq SINE Alu -16 297 1 9201 154 131 54 chr10 23452891 23453222 -122136066 + L1MCa LINE L1 2311 3051 -3375 811 155 0 0 chr10 23453737 23453853 -122135435 + FLAM_A SINE Alu 2 117 -16 27 49 0 0 chr10 23454062 23454103 -122135185 + AT_rich Low_complexity Low_complexity 1 41 0 30 0 0 0 chr10 23454143 23454173 -122135115 + AT_rich Low_complexity Low_complexity 1 30 0 519 175 77 108 chr10 23454603 23454715 -122134573 - MER5A DNA MER1_type 0 189 84 1937 130 65 3 chr10 23454715 23455008 -122134280 - AluJb SINE Alu -1 311 1 519 175 77 108 chr10 23455008 23455089 -122134199 - MER5A DNA MER1_type -105 84 2 1369 182 0 45 chr10 23456799 23457068 -122132220 + AluJo SINE Alu 37 293 -19 26 64 0 0 chr10 23457314 23457361 -122131927 + AT_rich Low_complexity Low_complexity 1 47 0 1669 224 28 71 chr10 23457458 23458024 -122131264 + MER34 LTR ERV1 1 542 0 563 83 28 9 chr10 23458713 23458822 -122130466 + (TG)n Simple_repeat Simple_repeat 1 111 0 29 47 0 0 chr10 23459827 23459870 -122129418 + AT_rich Low_complexity Low_complexity 1 43 0 655 198 43 0 chr10 23459870 23459986 -122129302 - FLAM_A SINE Alu -12 121 1 190 273 23 0 chr10 23460672 23460716 -122128572 + MIR SINE MIR 33 77 -131 2284 59 40 16 chr10 23460902 23461205 -122128083 - AluY SINE Alu -1 310 1 2108 120 30 0 chr10 23461604 23461904 -122127384 - AluSx SINE Alu -3 309 1 221 227 0 0 chr10 23462253 23462297 -122126991 - L2 LINE L2 -2 3311 3268 2030 173 45 47 chr10 23462370 23462840 -122126448 - MER74A LTR ERVL -73 485 15 1633 190 7 0 chr10 23462840 23463129 -122126159 + AluJo SINE Alu 3 293 -19 2030 173 45 47 chr10 23463129 23463144 -122126144 - MER74A LTR ERVL -543 15 1 366 307 23 47 chr10 23464343 23464558 -122124730 - MER63A DNA MER1_type 0 210 1 1944 139 3 7 chr10 23465126 23465421 -122123867 + AluJo SINE Alu 1 294 -18 1673 141 86 7 chr10 23466016 23466285 -122123003 + AluJo SINE Alu 1 290 -22 579 346 82 16 chr10 23466347 23466782 -122122506 - L2 LINE L2 -266 3006 2537 245 222 16 16 chr10 23467087 23467150 -122122138 + GA-rich Low_complexity Low_complexity 2 64 0 559 373 150 4 chr10 23467169 23467721 -122121567 - L2 LINE L2 -2417 897 265 201 272 12 99 chr10 23467686 23467767 -122121521 + L2 LINE L2 3229 3302 -11 * 4796 221 74 41 chr10 23468530 23469858 -122119430 - L1ME1 LINE L1 -5 6230 4947 2339 129 73 22 chr10 23469858 23470269 -122119019 - MSTB1 LTR MaLR 0 432 1 4796 221 74 41 chr10 23470269 23471562 -122117726 - L1ME1 LINE L1 -1288 4947 3473 2528 74 3 0 chr10 23471562 23471871 -122117417 - AluY SINE Alu -1 310 1 4796 221 74 41 chr10 23471871 23472486 -122116802 - L1ME1 LINE L1 -2762 3473 2880 1664 201 19 50 chr10 23472478 23472900 -122116388 - L1MB8 LINE L1 -1 6177 5769 * 1494 255 51 34 chr10 23472893 23473543 -122115745 - L1ME1 LINE L1 -3324 2891 2231 * 1050 166 4 22 chr10 23473546 23473775 -122115513 + MER1B DNA MER1_type 1 278 -61 1076 212 77 91 chr10 23473775 23474322 -122114966 - L1ME1 LINE L1 -4124 2272 1734 732 172 127 19 chr10 23474323 23474480 -122114808 + MER6B DNA MER2_type 32 205 -5 719 278 61 16 chr10 23474483 23474925 -122114363 - L1ME1 LINE L1 -4923 1473 1012 996 211 57 0 chr10 23475166 23475450 -122113838 - MER33 DNA MER1_type -32 292 1 2258 88 7 0 chr10 23475579 23475876 -122113412 - AluSc SINE Alu -10 299 1 1197 294 51 11 chr10 23475923 23476277 -122113011 + LTR16C LTR ERVL 101 468 -23 958 245 130 81 chr10 23476447 23476753 -122112535 + HAL1b LINE L1 73 363 -985 1747 184 0 0 chr10 23476753 23477041 -122112247 - AluJo SINE Alu -24 288 1 958 245 130 81 chr10 23477041 23477429 -122111859 + HAL1b LINE L1 363 813 -535 2436 111 0 0 chr10 23477429 23477781 -122111507 + L1PA13 LINE L1 5811 6162 -1 958 245 130 81 chr10 23477781 23477884 -122111404 + HAL1b LINE L1 813 910 -438 324 279 93 19 chr10 23478321 23478482 -122110806 + L1 LINE L1 3514 3686 -2460 433 278 226 39 chr10 23478627 23478933 -122110355 - L2 LINE L2 -994 2320 1958 1871 121 197 0 chr10 23479163 23479519 -122109769 - MSTA LTR MaLR -2 426 1 300 260 239 28 chr10 23479519 23479804 -122109484 - L2 LINE L2 -1389 1925 1581 209 33 33 0 chr10 23479913 23479943 -122109345 + (TTA)n Simple_repeat Simple_repeat 3 33 0 384 288 159 41 chr10 23479991 23480331 -122108957 - HAL1 LINE L1 -813 1694 1315 2275 101 7 0 chr10 23480509 23480807 -122108481 + AluSx SINE Alu 3 302 -10 27 0 0 0 chr10 23483582 23483609 -122105679 + AT_rich Low_complexity Low_complexity 1 27 0 21 36 0 0 chr10 23483692 23483720 -122105568 + AT_rich Low_complexity Low_complexity 1 28 0 1942 140 17 0 chr10 23483820 23484113 -122105175 - AluSq SINE Alu -15 298 1 536 242 92 38 chr10 23484122 23484412 -122104876 - L1ME3 LINE L1 -2 6160 5844 37066 89 7 13 chr10 23484412 23490622 -122098666 + L1PA6 LINE L1 11 6181 0 705 194 124 0 chr10 23490636 23490822 -122098466 - L1ME3 LINE L1 -324 5838 5630 1516 280 79 34 chr10 23490830 23491712 -122097576 - L1ME3 LINE L1 -1032 5114 4193 1037 252 47 38 chr10 23491712 23492030 -122097258 - LTR40b LTR ERVL 0 462 142 39 50 0 0 chr10 23492350 23492410 -122096878 + AT_rich Low_complexity Low_complexity 1 60 0 1664 174 39 7 chr10 23492429 23492711 -122096577 + AluJb SINE Alu 1 291 -21 3786 197 1 1 chr10 23492730 23493501 -122095787 - L1 LINE L1 -2026 4120 3350 3279 213 13 0 chr10 23493495 23494205 -122095083 + L1 LINE L1 4116 4834 -1312 * 2423 84 3 0 chr10 23495455 23495764 -122093524 + AluSx SINE Alu 1 310 -2 252 100 0 0 chr10 23496020 23496060 -122093228 + (TTCC)n Simple_repeat Simple_repeat 4 43 0 1703 163 25 4 chr10 23496094 23496370 -122092918 - AluJo SINE Alu -30 282 1 273 269 137 6 chr10 23496409 23496584 -122092704 - HAL1 LINE L1 -220 2287 2090 898 264 109 48 chr10 23496644 23497084 -122092204 - HAL1 LINE L1 -2040 467 1 315 190 21 120 chr10 23499239 23499381 -122089907 + MIR SINE MIR 81 208 -54 268 253 13 13 chr10 23500368 23500443 -122088845 - MER20B DNA MER1_type 0 783 709 989 229 78 72 chr10 23500539 23500897 -122088391 - MLT1G1 LTR MaLR -173 393 43 943 130 269 10 chr10 23500913 23501121 -122088167 + AluSg SINE Alu 4 265 -45 279 226 19 0 chr10 23501131 23501184 -122088104 - MLT1G1 LTR MaLR -541 54 1 645 251 59 0 chr10 23501184 23501371 -122087917 - MER20B DNA MER1_type -69 714 517 26 30 0 0 chr10 23503073 23503106 -122086182 + AT_rich Low_complexity Low_complexity 1 33 0 493 228 22 60 chr10 23503273 23503457 -122085831 - MER96B DNA MER1_type? 0 417 241 252 323 44 25 chr10 23503689 23503847 -122085441 - MER20B DNA MER1_type -606 177 17 1506 144 6 113 chr10 23504516 23504843 -122084445 - AluJb SINE Alu -10 292 1 1642 169 3 60 chr10 23505682 23506001 -122083287 + AluJo SINE Alu 1 301 -11 762 206 0 7 chr10 23506481 23506622 -122082666 + MER69A DNA AcHobo 36 175 -2 646 302 67 76 chr10 23506684 23507253 -122082035 + L1MB8 LINE L1 4489 5052 -1094 1060 171 0 11 chr10 23507302 23507483 -122081805 - AluJb SINE Alu 0 312 134 2913 191 7 17 chr10 23507737 23508328 -122080960 + L1MB8 LINE L1 5574 6158 -20 855 310 59 26 chr10 23508436 23508975 -122080313 + L1ME4a LINE L1 5355 5911 -210 234 0 0 0 chr10 23509280 23509306 -122079982 + (CAAAAA)n Simple_repeat Simple_repeat 3 28 0 192 125 0 0 chr10 23510118 23510150 -122079138 + (TATATG)n Simple_repeat Simple_repeat 3 34 0 1475 113 0 0 chr10 23510150 23510345 -122078943 - AluSg/x SINE Alu -18 292 98 1780 118 63 41 chr10 23510851 23511214 -122078074 - THE1C LTR MaLR 0 375 5 205 306 0 0 chr10 23511305 23511390 -122077898 + A-rich Low_complexity Low_complexity 1 85 0 935 286 84 35 chr10 23511432 23511838 -122077450 + LTR16A LTR ERVL 25 450 0 1054 311 44 19 chr10 23511838 23512314 -122076974 + HERV16 LTR ERVL 1 488 -4508 1211 274 59 13 chr10 23512663 23513134 -122076154 + HERV16 LTR ERVL 933 1425 -3571 1287 189 51 31 chr10 23513293 23513547 -122075741 + AluJo SINE Alu 1 259 -53 198 0 0 0 chr10 23513548 23513570 -122075718 + (GAAAA)n Simple_repeat Simple_repeat 3 24 0 269 264 140 67 chr10 23513723 23513916 -122075372 + HERV16 LTR ERVL 1833 2039 -2957 1343 181 4 0 chr10 23513917 23514149 -122075139 + AluJo SINE Alu 68 300 -12 349 210 0 25 chr10 23514163 23514244 -122075044 + MLT1H1 LTR MaLR 469 547 -8 243 298 21 21 chr10 23514478 23514572 -122074716 + MLT1-int LTR MaLR 398 491 -880 1644 144 100 10 chr10 23514683 23514982 -122074306 - L1MC3 LINE L1 -354 7431 7106 807 112 30 37 chr10 23515017 23515151 -122074137 - FLAM_C SINE Alu 0 133 1 281 222 12 25 chr10 23515172 23515253 -122074035 - L1M4 LINE L1 -1305 4841 4762 4749 174 22 39 chr10 23515294 23516689 -122072599 - L1MB3 LINE L1 -2 6181 4810 925 227 118 5 chr10 23516703 23517033 -122072255 + MLT2B1 LTR ERVL 1 520 0 360 266 62 79 chr10 23517190 23517543 -122071745 - L1ME4a LINE L1 -125 5996 5650 1233 209 12 91 chr10 23518175 23518581 -122070707 + MLT1A2 LTR MaLR 1 374 0 186 43 0 0 chr10 23519091 23519114 -122070174 + (A)n Simple_repeat Simple_repeat 1 23 0 285 272 200 8 chr10 23519166 23519291 -122069997 + L1ME3A LINE L1 5999 6147 -23 427 129 0 0 chr10 23520365 23520427 -122068861 - AluJo SINE Alu -16 296 235 815 167 7 0 chr10 23520427 23520565 -122068723 - AluJo SINE Alu -163 149 11 373 278 112 16 chr10 23521296 23521483 -122067805 + MIR SINE MIR 20 224 -38 708 0 0 0 chr10 23522526 23522601 -122066687 - tRNA-Asn-AAC tRNA tRNA -2 75 1 21 0 0 0 chr10 23525067 23525088 -122064200 + AT_rich Low_complexity Low_complexity 1 21 0 2236 100 7 3 chr10 23525088 23525388 -122063900 + AluSq SINE Alu 1 301 -12 1879 160 0 25 chr10 23525712 23526031 -122063257 + AluJo SINE Alu 1 311 -1 21 57 0 0 chr10 23526048 23526083 -122063205 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr10 23526210 23526233 -122063055 + AT_rich Low_complexity Low_complexity 1 23 0 1585 189 35 0 chr10 23527090 23527210 -122062078 + AluJo SINE Alu 1 115 -197 207 0 0 0 chr10 23527210 23527233 -122062055 + (TAA)n Simple_repeat Simple_repeat 2 24 0 1585 189 35 0 chr10 23527233 23527397 -122061891 + AluJo SINE Alu 115 295 -17 1444 151 0 9 chr10 23527608 23527840 -122061448 + AluSg/x SINE Alu 79 308 -2 240 305 128 21 chr10 23528537 23528678 -122060610 - MIR SINE MIR -1 261 106 2461 93 0 0 chr10 23529116 23529428 -122059860 + AluSx SINE Alu 1 312 0 878 220 83 17 chr10 23529696 23529937 -122059351 - MIR SINE MIR -5 257 1 386 198 188 9 chr10 23530026 23530164 -122059124 - L1MD3 LINE L1 -1 8040 7890 5662 163 18 98 chr10 23530171 23530384 -122058904 - L1 LINE L1 -2362 3784 3555 2294 97 13 3 chr10 23530384 23530692 -122058596 - AluSq SINE Alu -1 312 2 5662 163 18 98 chr10 23530692 23531910 -122057378 - L1 LINE L1 -2591 3555 2469 1495 167 65 114 chr10 23531885 23532028 -122057260 - L1MC4 LINE L1 -124 7918 7770 * 1719 142 68 25 chr10 23532028 23532309 -122056979 - AluSx SINE Alu -19 293 1 1495 167 65 114 chr10 23532309 23532638 -122056650 - L1MC4 LINE L1 -272 7770 7469 31 0 0 0 chr10 23532842 23532873 -122056415 + AT_rich Low_complexity Low_complexity 1 31 0 23 54 0 0 chr10 23533722 23533759 -122055529 + AT_rich Low_complexity Low_complexity 1 37 0 3755 186 64 28 chr10 23534133 23535481 -122053807 + L1MB7 LINE L1 4769 6167 -17 1773 166 0 46 chr10 23535688 23535832 -122053456 + AluJo SINE Alu 1 150 -162 1810 174 0 7 chr10 23535832 23536131 -122053157 + AluJb SINE Alu 1 297 -15 1773 166 0 46 chr10 23536131 23536311 -122052977 + AluJo SINE Alu 150 310 -2 210 256 23 0 chr10 23536441 23536484 -122052804 - L2 LINE L2 -10 3262 3219 209 270 79 22 chr10 23536861 23536950 -122052338 + L2 LINE L2 1891 1984 -1330 877 122 24 0 chr10 23537421 23537544 -122051744 + AluJo SINE Alu 11 136 -176 301 314 194 27 chr10 23537574 23538017 -122051271 + L2 LINE L2 2154 2670 -644 441 290 53 30 chr10 23538091 23538222 -122051066 + MER119 DNA MER1_type 1 134 -449 559 244 16 0 chr10 23538223 23538350 -122050938 + MER119 DNA MER1_type 455 583 0 1639 160 68 4 chr10 23539001 23539282 -122050006 + AluJo SINE Alu 1 299 -13 2217 92 7 7 chr10 23539298 23539593 -122049695 - AluSq SINE Alu -18 295 1 288 369 49 16 chr10 23539650 23539772 -122049516 + L2 LINE L2 3138 3263 -9 1378 78 6 11 chr10 23540076 23540256 -122049032 - AluSq SINE Alu -134 179 1 353 344 46 15 chr10 23540313 23540444 -122048844 + L2 LINE L2 3138 3272 0 322 305 57 40 chr10 23540583 23540900 -122048388 + MLT1L LTR MaLR 1 389 -226 2157 104 10 3 chr10 23542197 23542495 -122046793 + AluSq SINE Alu 1 300 -13 301 283 92 38 chr10 23542703 23542838 -122046450 - L1M4 LINE L1 -861 5285 5159 1717 164 122 3 chr10 23542838 23543149 -122046139 - MER7A DNA MER2_type 0 346 1 301 283 92 38 chr10 23543149 23543241 -122046047 - L1M4 LINE L1 -987 5159 5073 2208 101 0 29 chr10 23543241 23543547 -122045741 - AluSc SINE Alu -12 297 1 301 283 92 38 chr10 23543547 23543664 -122045624 - L1M4 LINE L1 -1073 5073 4921 207 0 0 0 chr10 23544508 23544531 -122044757 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 456 67 0 0 chr10 23544732 23544792 -122044496 + (TTTA)n Simple_repeat Simple_repeat 1 60 0 1143 108 37 70 chr10 23549113 23549327 -122039961 - AluSq SINE Alu -104 209 3 194 400 0 0 chr10 23549431 23549516 -122039772 - MIR SINE MIR -130 132 48 2191 104 0 42 chr10 23549544 23549851 -122039437 - AluSg SINE Alu -14 296 3 1871 114 0 29 chr10 23550110 23550391 -122038897 - AluSg SINE Alu -9 301 29 2354 79 0 3 chr10 23551100 23551403 -122037885 + AluY SINE Alu 1 302 -9 1380 115 103 33 chr10 23551404 23551647 -122037641 - MER51B LTR ERV1 -117 260 1 2282 263 83 34 chr10 23552538 23553684 -122035604 + L2 LINE L2 2111 3313 0 965 191 5 16 chr10 23553787 23553976 -122035312 - AluJo SINE Alu -7 305 119 219 293 17 0 chr10 23553977 23554035 -122035253 + L2 LINE L2 3247 3305 -8 628 212 80 80 chr10 23554043 23554269 -122035019 + MIR SINE MIR 11 236 -26 2386 97 7 0 chr10 23554494 23554803 -122034485 + AluSx SINE Alu 1 311 -1 1988 107 0 21 chr10 23554842 23555123 -122034165 + L1PA15 LINE L1 5888 6162 -3 1819 129 0 74 chr10 23557847 23558172 -122031116 - AluJo SINE Alu -10 302 2 570 311 138 73 chr10 23559046 23559675 -122029613 + L2 LINE L2 1893 2569 -745 2069 141 3 0 chr10 23559675 23559974 -122029314 - AluJo SINE Alu -12 300 1 570 311 138 73 chr10 23559974 23560012 -122029276 + L2 LINE L2 2569 2603 -711 827 230 49 49 chr10 23560085 23560350 -122028938 - L1ME3A LINE L1 0 6170 5906 391 282 53 121 chr10 23560353 23560549 -122028739 + L2 LINE L2 2708 2872 -441 1951 108 22 7 chr10 23560549 23560826 -122028462 - AluSx SINE Alu -13 299 19 391 282 53 121 chr10 23560826 23561035 -122028253 + L2 LINE L2 2872 3093 -220 1753 150 0 36 chr10 23561200 23561507 -122027781 + AluSx SINE Alu 1 296 -16 1636 186 4 0 chr10 23561709 23561988 -122027300 + AluJb SINE Alu 1 280 -32 713 69 0 10 chr10 23561988 23562089 -122027199 + (GGAA)n Simple_repeat Simple_repeat 2 101 0 1271 212 4 4 chr10 23562610 23562869 -122026419 - AluJo SINE Alu -53 259 1 322 54 54 0 chr10 23563282 23563338 -122025950 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 1456 172 13 50 chr10 23563340 23563642 -122025646 + AluJo SINE Alu 1 291 -21 464 291 9 62 chr10 23564057 23564267 -122025021 + L2 LINE L2 2393 2591 -723 707 276 121 46 chr10 23564290 23564703 -122024585 - MLT1L LTR MaLR -8 607 164 2596 112 5 32 chr10 23564711 23565085 -122024203 + THE1B LTR MaLR 1 364 0 275 139 0 0 chr10 23565153 23565196 -122024092 + LTR67 LTR ERVL 97 139 -418 1792 142 3 70 chr10 23566247 23566389 -122022899 + AluJb SINE Alu 1 151 -161 1577 94 0 10 chr10 23566389 23566592 -122022696 + AluSg/x SINE Alu 98 298 -14 2223 111 0 0 chr10 23566593 23566881 -122022407 + AluSx SINE Alu 3 290 -22 225 0 0 0 chr10 23566888 23566913 -122022375 + (CA)n Simple_repeat Simple_repeat 2 26 0 1792 142 3 70 chr10 23566913 23567076 -122022212 + AluJb SINE Alu 157 295 -17 375 284 53 64 chr10 23567838 23568102 -122021186 + MARNA DNA Mariner 214 474 -112 1879 100 35 52 chr10 23568170 23568460 -122020828 + AluSg SINE Alu 1 285 -25 630 326 98 29 chr10 23568470 23568945 -122020343 + L2 LINE L2 2766 3271 -1 2275 114 0 0 chr10 23569271 23569570 -122019718 + AluSx SINE Alu 1 299 -13 428 312 144 0 chr10 23569693 23569895 -122019393 - MIR SINE MIR -1 261 31 1994 123 0 42 chr10 23569957 23570265 -122019023 + AluJo SINE Alu 6 300 -12 959 227 82 118 chr10 23570407 23570986 -122018302 - MLT1F1 LTR MaLR 0 567 1 891 165 0 25 chr10 23570993 23571151 -122018137 - FRAM SINE Alu -22 154 1 1857 117 75 0 chr10 23571268 23571549 -122017739 + AluSx SINE Alu 1 302 -10 282 29 0 0 chr10 23571713 23571748 -122017540 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 776 176 8 0 chr10 23571749 23571868 -122017420 - FLAM_C SINE Alu -23 120 2 1912 105 4 0 chr10 23572497 23572754 -122016534 - AluSc SINE Alu -51 258 1 22 0 0 0 chr10 23573084 23573106 -122016182 + AT_rich Low_complexity Low_complexity 1 22 0 1471 123 33 0 chr10 23573364 23573576 -122015712 - AluSg/x SINE Alu -8 304 86 1713 143 7 38 chr10 23573671 23573985 -122015303 + AluJb SINE Alu 1 305 0 2056 133 3 0 chr10 23574453 23574762 -122014526 + AluSx SINE Alu 1 310 -2 197 318 16 16 chr10 23574924 23574987 -122014301 - L2 LINE L2 0 3272 3210 2172 113 0 0 chr10 23575696 23576005 -122013283 + AluSx SINE Alu 1 309 0 234 174 0 0 chr10 23576010 23576056 -122013232 - L1 LINE L1 -1826 4320 4275 3035 212 17 11 chr10 23576123 23576830 -122012458 - L1 LINE L1 -1888 4258 3548 454 158 50 0 chr10 23576832 23576933 -122012355 - L1ME LINE L1 -725 5439 5334 1595 136 13 0 chr10 23576933 23577169 -122012119 + AluSx SINE Alu 1 239 -73 25 0 0 0 chr10 23577275 23577300 -122011988 + GC_rich Low_complexity Low_complexity 1 25 0 2137 105 3 3 chr10 23580893 23581187 -122008101 - AluSg SINE Alu -16 294 1 1085 253 59 96 chr10 23581190 23581599 -122007689 - L1ME LINE L1 -924 5222 4799 2387 76 0 0 chr10 23581599 23581901 -122007387 - AluY SINE Alu -9 302 1 1085 253 59 96 chr10 23581901 23581975 -122007313 - L1ME LINE L1 -1347 4799 4724 1888 107 0 46 chr10 23581975 23582255 -122007033 - AluSg1 SINE Alu -11 298 32 1085 253 59 96 chr10 23582255 23582434 -122006854 - L1ME LINE L1 -1422 4724 4584 351 0 0 0 chr10 23582458 23582497 -122006791 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 233 281 53 79 chr10 23582534 23582648 -122006640 - L2 LINE L2 -4 3268 3158 743 244 74 48 chr10 23582861 23583091 -122006197 - MIR SINE MIR -15 247 12 231 88 0 0 chr10 23583296 23583330 -122005958 + (TGG)n Simple_repeat Simple_repeat 2 35 0 329 261 70 35 chr10 23583417 23583532 -122005756 + ERVL LTR ERVL 1886 2004 -3760 785 288 24 71 chr10 23583583 23583778 -122005510 + L2 LINE L2 2992 3166 -147 2038 141 28 0 chr10 23583778 23584069 -122005219 - AluSx SINE Alu -13 299 1 785 288 24 71 chr10 23584069 23584210 -122005078 + L2 LINE L2 3166 3312 -1 1552 160 30 15 chr10 23584271 23584534 -122004754 - AluJo SINE Alu -41 271 5 314 255 83 78 chr10 23584587 23584791 -122004497 + ERVL LTR ERVL 2137 2341 -3423 1199 315 67 20 chr10 23585055 23585393 -122003895 + ERVL LTR ERVL 4757 5133 -631 1888 171 0 7 chr10 23585393 23585692 -122003596 - AluSx SINE Alu -14 298 2 1199 315 67 20 chr10 23585692 23585906 -122003382 + ERVL LTR ERVL 5133 5335 -429 473 158 89 10 chr10 23585949 23586050 -122003238 + FLAM_C SINE Alu 1 109 -34 216 0 0 0 chr10 23586055 23586079 -122003209 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 210 300 29 0 chr10 23586412 23586482 -122002806 + CT-rich Low_complexity Low_complexity 3 74 0 1886 189 93 56 chr10 23586972 23587377 -122001911 - MER63 DNA MER1_type 0 1061 632 2008 118 14 0 chr10 23587377 23587657 -122001631 + AluSx SINE Alu 1 284 -28 1886 189 93 56 chr10 23587657 23587755 -122001533 - MER63 DNA MER1_type -429 632 539 297 206 103 10 chr10 23587796 23587893 -122001395 + LTR67 LTR ERVL 452 557 0 1863 146 0 30 chr10 23588206 23588507 -122000781 - AluJo SINE Alu -20 292 1 251 237 0 51 chr10 23588507 23588566 -122000722 - L2 LINE L2 -12 3301 3246 21 0 0 0 chr10 23588785 23588806 -122000482 + AT_rich Low_complexity Low_complexity 1 21 0 609 211 0 17 chr10 23588806 23589172 -122000116 + (CATATA)n Simple_repeat Simple_repeat 1 359 0 308 303 11 0 chr10 23589213 23589302 -121999986 - L1MC4 LINE L1 -1339 6703 6614 * 348 264 11 0 chr10 23589232 23589319 -121999969 + L1MC4 LINE L1 6615 6702 -1340 1536 158 47 18 chr10 23589319 23589598 -121999690 - AluJo SINE Alu -25 287 1 656 258 156 54 chr10 23589712 23590316 -121998972 - MLT2F LTR ERVL -2 626 1 278 214 57 0 chr10 23590346 23590416 -121998872 + MIR SINE MIR 111 184 -78 1678 200 0 3 chr10 23590575 23590865 -121998423 + AluJo SINE Alu 1 289 -23 642 222 32 11 chr10 23591197 23591382 -121997906 + MER53 DNA DNA 1 189 0 289 196 0 0 chr10 23591889 23591945 -121997343 + L1M4 LINE L1 5157 5212 -934 1054 228 82 7 chr10 23591949 23592252 -121997036 + L1ME1 LINE L1 3434 3759 -2387 858 124 0 8 chr10 23592252 23592373 -121996915 + AluJb SINE Alu 1 120 -192 5714 202 44 23 chr10 23592411 23593285 -121996003 + L1ME1 LINE L1 3760 4613 -1553 1608 141 96 4 chr10 23593285 23593555 -121995733 + AluSx SINE Alu 1 295 -17 5714 202 44 23 chr10 23593555 23594753 -121994535 + L1ME1 LINE L1 4613 5888 -278 2238 95 3 0 chr10 23594753 23595061 -121994227 + AluSp SINE Alu 1 309 0 5714 202 44 23 chr10 23595061 23595292 -121993996 + L1ME1 LINE L1 5888 6112 -54 377 296 23 30 chr10 23596034 23596188 -121993100 - MIR SINE MIR -65 143 36 238 204 20 0 chr10 23596203 23596252 -121993036 - L2 LINE L2 -1 3312 3263 213 121 0 0 chr10 23597938 23597971 -121991317 + (A)n Simple_repeat Simple_repeat 1 33 0 2243 90 7 0 chr10 23598580 23598869 -121990419 - AluSc SINE Alu -18 291 1 205 225 0 28 chr10 23599641 23599712 -121989576 + CT-rich Low_complexity Low_complexity 3 71 0 1730 145 27 0 chr10 23600728 23600990 -121988298 + AluSx SINE Alu 44 312 0 23 33 0 0 chr10 23601083 23601113 -121988175 + AT_rich Low_complexity Low_complexity 1 30 0 927 82 0 8 chr10 23601176 23601298 -121987990 + AluSq/x SINE Alu 1 121 -191 218 31 0 31 chr10 23601298 23601330 -121987958 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 25 31 0 0 chr10 23603204 23603236 -121986052 + AT_rich Low_complexity Low_complexity 1 32 0 23 33 0 0 chr10 23605940 23605970 -121983318 + AT_rich Low_complexity Low_complexity 1 30 0 200 86 29 0 chr10 23606550 23606585 -121982703 + (TTTC)n Simple_repeat Simple_repeat 1 36 0 476 302 79 69 chr10 23608445 23609074 -121980214 - L2 LINE L2 0 3313 2597 2095 86 61 0 chr10 23609552 23609832 -121979456 + AluSx SINE Alu 1 297 -15 428 271 0 0 chr10 23610055 23610162 -121979126 + MIR SINE MIR 151 257 -5 21 0 0 0 chr10 23610678 23610699 -121978589 + AT_rich Low_complexity Low_complexity 1 21 0 502 205 98 0 chr10 23611103 23611215 -121978073 - MER91C DNA MER1_type -17 123 1 322 376 17 12 chr10 23611273 23611446 -121977842 + L2 LINE L2 2736 2909 -405 481 352 98 19 chr10 23611519 23611939 -121977349 + L2 LINE L2 2521 2973 -341 7585 27 8 0 chr10 23612407 23613638 -121975650 - L1PA3 LINE L1 0 6155 4921 628 257 137 13 chr10 23613667 23613893 -121975395 - MIR SINE MIR -7 255 2 864 182 0 25 chr10 23614222 23614381 -121974907 - AluSg/x SINE Alu -21 289 135 1033 95 19 0 chr10 23614381 23614539 -121974749 + L1MB4 LINE L1 6020 6180 0 335 118 106 24 chr10 23614630 23614715 -121974573 - L1PA16 LINE L1 0 6166 6075 21 0 0 0 chr10 23615100 23615121 -121974167 + AT_rich Low_complexity Low_complexity 1 21 0 527 157 222 0 chr10 23615197 23615305 -121973983 + FLAM_C SINE Alu 1 132 -1 216 0 0 0 chr10 23615712 23615736 -121973552 + (TTCC)n Simple_repeat Simple_repeat 1 24 0 1862 149 35 14 chr10 23616237 23616526 -121972762 + AluSx SINE Alu 1 295 -17 22 70 0 0 chr10 23616570 23616613 -121972675 + AT_rich Low_complexity Low_complexity 1 43 0 450 158 28 20 chr10 23616805 23617060 -121972228 + (TA)n Simple_repeat Simple_repeat 1 257 0 1575 173 50 20 chr10 23617282 23617582 -121971706 + AluJb SINE Alu 1 309 -3 1366 195 25 7 chr10 23617630 23617907 -121971381 + L1MB4 LINE L1 5310 5591 -589 547 174 15 8 chr10 23617907 23618018 -121971270 + L1MB4 LINE L1 6048 6180 0 235 61 30 0 chr10 23618498 23618531 -121970757 + U2 snRNA snRNA 1 34 -154 730 252 83 15 chr10 23618946 23619147 -121970141 + MIR SINE MIR 50 262 0 4707 155 21 15 chr10 23620542 23621406 -121967882 + L1MB5 LINE L1 5293 6161 -13 389 60 194 0 chr10 23623809 23623876 -121965412 - MADE1 DNA Mariner 0 80 1 838 245 45 25 chr10 23624353 23624598 -121964690 + MIR SINE MIR 2 251 -11 236 327 36 36 chr10 23625217 23625327 -121963961 - MIR SINE MIR -149 113 4 22 35 0 0 chr10 23625515 23625544 -121963744 + AT_rich Low_complexity Low_complexity 1 29 0 2331 89 3 0 chr10 23626082 23626374 -121962914 - AluSg SINE Alu -17 293 1 525 132 9 0 chr10 23626965 23627071 -121962217 + Tigger7 DNA MER2_type 2262 2368 -119 307 83 21 0 chr10 23627076 23627124 -121962164 - L1PB4 LINE L1 -8 6148 6100 231 282 56 0 chr10 23627703 23627774 -121961514 - MIR SINE MIR -71 137 63 235 91 200 0 chr10 23628277 23628332 -121960956 - L1MA8 LINE L1 -113 6178 6113 1824 170 0 27 chr10 23629311 23629611 -121959677 + AluJb SINE Alu 3 294 -18 2093 112 30 0 chr10 23630404 23630700 -121958588 - AluSq SINE Alu -8 305 1 442 211 0 9 chr10 23630811 23630925 -121958363 + Charlie5 DNA MER1_type 11 123 -2489 1545 154 67 16 chr10 23630925 23631296 -121957992 + Charlie5 DNA MER1_type 2233 2622 0 183 220 0 0 chr10 23631390 23631440 -121957848 + (CATA)n Simple_repeat Simple_repeat 2 51 0 201 244 0 0 chr10 23631440 23631481 -121957807 + (TG)n Simple_repeat Simple_repeat 1 41 0 1643 208 108 49 chr10 23631484 23631626 -121957662 + MLT1F LTR MaLR 1 133 -409 1601 158 79 0 chr10 23631626 23631904 -121957384 + AluJo SINE Alu 1 300 -12 1643 208 108 49 chr10 23631904 23632271 -121957017 + MLT1F LTR MaLR 133 540 -2 274 249 43 11 chr10 23632286 23632318 -121956970 + L1MC/D LINE L1 5691 5721 -400 198 0 0 0 chr10 23632318 23632340 -121956948 + (CAAAC)n Simple_repeat Simple_repeat 3 24 0 274 249 43 11 chr10 23632340 23632426 -121956862 + L1MC/D LINE L1 5721 5820 -301 197 196 98 0 chr10 23632646 23632697 -121956591 + L2 LINE L2 3167 3222 -91 38 22 0 0 chr10 23632785 23632830 -121956458 + AT_rich Low_complexity Low_complexity 1 45 0 2311 122 0 0 chr10 23632875 23633187 -121956101 - AluSx SINE Alu 0 312 1 305 125 0 0 chr10 23633190 23633238 -121956050 - L1PB4 LINE L1 -31 6125 6078 1175 200 200 69 chr10 23634111 23634587 -121954701 + MLT1F LTR MaLR 1 538 -4 1804 159 7 0 chr10 23634628 23634917 -121954371 - AluJo SINE Alu -21 291 1 1569 180 21 32 chr10 23635117 23635428 -121953860 - AluSx SINE Alu 0 310 3 440 195 90 132 chr10 23636065 23636288 -121953000 + Charlie8 DNA MER1_type 5 228 -2189 21 0 0 0 chr10 23637407 23637428 -121951860 + AT_rich Low_complexity Low_complexity 1 21 0 2341 97 0 3 chr10 23638183 23638483 -121950805 + AluSg1 SINE Alu 3 301 -8 203 171 0 24 chr10 23638487 23638528 -121950760 + GA-rich Low_complexity Low_complexity 2 41 0 270 308 64 0 chr10 23638662 23638740 -121950548 + L2 LINE L2 3229 3311 -2 741 289 93 14 chr10 23638792 23639148 -121950140 - MLT1L LTR MaLR -10 605 222 25 65 0 0 chr10 23639970 23640016 -121949272 + AT_rich Low_complexity Low_complexity 1 46 0 195 288 14 27 chr10 23640344 23640417 -121948871 + L2 LINE L2 3242 3313 0 1087 183 27 27 chr10 23642931 23643150 -121946138 - MER20 DNA MER1_type 0 219 1 21 36 0 0 chr10 23643832 23643860 -121945428 + AT_rich Low_complexity Low_complexity 1 28 0 293 233 29 68 chr10 23644669 23644772 -121944516 + L2 LINE L2 3174 3272 0 28 48 0 0 chr10 23647347 23647389 -121941899 + AT_rich Low_complexity Low_complexity 1 42 0 25 31 0 0 chr10 23647497 23647529 -121941759 + AT_rich Low_complexity Low_complexity 1 32 0 205 179 26 0 chr10 23648059 23648098 -121941190 + CT-rich Low_complexity Low_complexity 3 42 0 760 196 12 0 chr10 23648858 23649031 -121940257 - L1M4 LINE L1 -783 5363 5189 4340 172 43 7 chr10 23649269 23649548 -121939740 - L1MB8 LINE L1 0 6178 5911 1643 185 17 14 chr10 23649548 23649835 -121939453 - AluJo SINE Alu -24 288 1 4340 172 43 7 chr10 23649835 23650644 -121938644 - L1MB8 LINE L1 -267 5911 5041 1207 137 114 24 chr10 23650748 23650991 -121938297 - MSTA LTR MaLR 0 428 160 2199 124 11 8 chr10 23650991 23651345 -121937943 + THE1A LTR MaLR 1 355 0 1207 137 114 24 chr10 23651345 23651356 -121937932 - MSTA LTR MaLR -268 160 151 3198 187 66 52 chr10 23651988 23652025 -121937263 + L1M4 LINE L1 4215 4250 -1896 270 56 0 0 chr10 23652025 23652061 -121937227 + (CA)n Simple_repeat Simple_repeat 1 36 0 3198 187 66 52 chr10 23652061 23652129 -121937159 + L1M4 LINE L1 4250 4316 -1830 1927 118 0 69 chr10 23652129 23652435 -121936853 - AluSx SINE Alu -19 293 9 3198 187 66 52 chr10 23652435 23653274 -121936014 + L1M4 LINE L1 4316 5177 -969 1665 194 7 10 chr10 23653274 23653567 -121935721 + AluJo SINE Alu 3 294 -18 3198 187 66 52 chr10 23653567 23653625 -121935663 + L1M4 LINE L1 5177 5233 -913 2239 109 0 0 chr10 23653652 23653945 -121935343 - AluSx SINE Alu -19 293 1 1977 166 3 29 chr10 23653956 23654341 -121934947 - L1MB8 LINE L1 -1 6177 5803 746 273 77 9 chr10 23656817 23657037 -121932251 + MIR SINE MIR 10 244 -18 3109 59 5 2 chr10 23657964 23658370 -121930918 - L1PA3 LINE L1 -4 6151 5745 24 32 0 0 chr10 23661002 23661033 -121928255 + AT_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr10 23667604 23667632 -121921656 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr10 23669211 23669233 -121920055 + GC_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr10 23673558 23673579 -121915709 + GC_rich Low_complexity Low_complexity 1 21 0 209 244 13 39 chr10 23673715 23673793 -121915495 + C-rich Low_complexity Low_complexity 5 80 0 210 143 0 0 chr10 23679033 23679068 -121910220 + (GGGAGA)n Simple_repeat Simple_repeat 3 37 0 920 23 8 23 chr10 23679108 23679238 -121910050 + (TTC)n Simple_repeat Simple_repeat 2 129 0 1730 166 92 3 chr10 23679535 23679914 -121909374 - L1MD2 LINE L1 -17 6342 5930 2130 100 0 0 chr10 23680671 23680942 -121908346 - AluSc SINE Alu -14 295 25 1952 137 27 3 chr10 23681508 23681678 -121907610 - AluSx SINE Alu -10 302 121 216 0 0 0 chr10 23681678 23681702 -121907586 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1952 137 27 3 chr10 23681702 23681824 -121907464 - AluSx SINE Alu -191 121 3 303 389 78 18 chr10 23683273 23683440 -121905848 + L2 LINE L2 2924 3100 -172 236 293 13 27 chr10 23683613 23683688 -121905600 - MIR SINE MIR -119 89 16 1984 100 43 4 chr10 23684568 23684849 -121904439 + AluY SINE Alu 1 292 -19 255 61 0 0 chr10 23684871 23684904 -121904384 + (TG)n Simple_repeat Simple_repeat 2 34 0 2169 96 31 0 chr10 23685193 23685485 -121903803 - AluSq SINE Alu -11 302 2 483 302 79 69 chr10 23686299 23686928 -121902360 - L2 LINE L2 0 3313 2597 2106 86 61 0 chr10 23687406 23687686 -121901602 + AluSx SINE Alu 1 297 -15 427 271 0 0 chr10 23687909 23688016 -121901272 + MIR SINE MIR 151 257 -5 21 0 0 0 chr10 23688532 23688553 -121900735 + AT_rich Low_complexity Low_complexity 1 21 0 510 205 98 0 chr10 23688957 23689069 -121900219 - MER91C DNA MER1_type -17 123 1 323 376 17 12 chr10 23689127 23689300 -121899988 + L2 LINE L2 2736 2909 -405 484 324 77 79 chr10 23689373 23690044 -121899244 + L2 LINE L2 2521 3186 -86 40581 34 24 2 chr10 23690261 23696280 -121893008 - L1PA3 LINE L1 0 6155 1 332 274 96 38 chr10 23696533 23696690 -121892598 - L2 LINE L2 -15 3298 3133 436 267 35 161 chr10 23697340 23697800 -121891488 - L2 LINE L2 0 3272 2871 2448 58 0 16 chr10 23698968 23699280 -121890008 - AluY SINE Alu -4 307 1 2066 86 0 7 chr10 23699729 23699998 -121889290 - AluSc SINE Alu -42 267 1 204 40 0 0 chr10 23700194 23700219 -121889069 + (A)n Simple_repeat Simple_repeat 1 25 0 2053 93 43 7 chr10 23700650 23700928 -121888360 + AluSx SINE Alu 1 288 -24 229 340 93 0 chr10 23701029 23701126 -121888162 - L2 LINE L2 -11 3261 3156 1330 188 45 51 chr10 23701148 23701440 -121887848 + AluJo SINE Alu 1 290 -22 399 210 76 8 chr10 23701619 23701738 -121887550 - MLT1J LTR MaLR -384 127 1 1922 98 106 53 chr10 23701881 23701994 -121887294 - MER51B LTR ERV1 0 377 271 2356 59 0 3 chr10 23701994 23702297 -121886991 + AluY SINE Alu 1 302 -9 1922 98 106 53 chr10 23702297 23702541 -121886747 - MER51B LTR ERV1 -106 271 1 2254 269 85 31 chr10 23703371 23704579 -121884709 + L2 LINE L2 2048 3313 0 1091 174 5 15 chr10 23704677 23704873 -121884415 - AluJo SINE Alu 0 312 119 227 293 17 0 chr10 23704874 23704932 -121884356 + L2 LINE L2 3247 3305 -8 647 212 80 80 chr10 23704940 23705166 -121884122 + MIR SINE MIR 11 236 -26 2385 97 7 0 chr10 23705391 23705700 -121883588 + AluSx SINE Alu 1 311 -1 1847 107 0 21 chr10 23705739 23706020 -121883268 + L1PA15 LINE L1 5888 6162 -3 1961 90 26 48 chr10 23706130 23706440 -121882848 - AluSx SINE Alu -9 303 1 206 377 19 19 chr10 23706527 23706633 -121882655 - MIR SINE MIR -62 146 41 2173 104 0 42 chr10 23706654 23706961 -121882327 - AluSg SINE Alu -14 296 3 1879 114 0 29 chr10 23707220 23707501 -121881787 - AluSg SINE Alu -9 301 29 2483 73 0 0 chr10 23708210 23708510 -121880778 + AluY SINE Alu 1 300 -11 1877 166 13 0 chr10 23708625 23708927 -121880361 - AluSx SINE Alu -6 306 1 22 35 0 0 chr10 23709773 23709802 -121879486 + AT_rich Low_complexity Low_complexity 1 29 0 207 182 45 30 chr10 23709935 23710001 -121879287 + (TTATA)n Simple_repeat Simple_repeat 4 70 0 328 290 32 0 chr10 23710009 23710102 -121879186 + MIR3 SINE MIR 106 201 -7 25 0 0 0 chr10 23710335 23710360 -121878928 + AT_rich Low_complexity Low_complexity 1 25 0 925 127 0 0 chr10 23710446 23710572 -121878716 + AluJ SINE Alu 1 126 -186 1102 114 6 11 chr10 23710583 23710759 -121878529 + LTR9 LTR ERV1 438 612 0 2364 152 21 44 chr10 23710761 23711138 -121878150 + HUERS-P3 LTR ERV1 2 367 -8552 2569 50 0 0 chr10 23711138 23711436 -121877852 - AluY SINE Alu -13 298 1 2364 152 21 44 chr10 23711436 23711533 -121877755 + HUERS-P3 LTR ERV1 367 465 -8454 446 82 0 27 chr10 23711542 23711615 -121877673 + LTR9 LTR ERV1 457 527 -85 1233 138 0 16 chr10 23711624 23711812 -121877476 + AluJ SINE Alu 127 311 -1 1838 216 137 13 chr10 23711814 23712346 -121876942 - L1ME3A LINE L1 -121 6049 5452 6043 193 24 56 chr10 23712383 23713011 -121876277 - L1MB5 LINE L1 -8 6166 5520 1774 147 61 3 chr10 23713011 23713304 -121875984 + AluSx SINE Alu 1 310 -2 6043 193 24 56 chr10 23713304 23714562 -121874726 - L1MB5 LINE L1 -654 5520 4398 2221 106 0 0 chr10 23714562 23714871 -121874417 + AluSx SINE Alu 1 309 0 6043 193 24 56 chr10 23714871 23715696 -121873592 - L1MB5 LINE L1 -1776 4398 3548 480 189 70 59 chr10 23715698 23715799 -121873489 - L1ME3A LINE L1 -725 5439 5341 1971 148 10 0 chr10 23715799 23716089 -121873199 + AluSx SINE Alu 1 293 -19 480 189 70 59 chr10 23716089 23716226 -121873062 - L1ME3A LINE L1 -823 5341 5188 183 80 0 0 chr10 23716376 23716401 -121872887 + (CA)n Simple_repeat Simple_repeat 1 25 0 1712 144 7 25 chr10 23716463 23716740 -121872548 - AluJb SINE Alu -36 276 5 655 203 0 8 chr10 23717211 23717334 -121871954 - AluJb SINE Alu -190 122 1 1222 127 6 11 chr10 23718037 23718218 -121871070 - AluJo SINE Alu -66 246 67 348 345 21 7 chr10 23718677 23718819 -121870469 - MIR SINE MIR 0 262 119 1755 173 0 27 chr10 23719059 23719360 -121869928 - AluJb SINE Alu -19 293 1 1599 164 58 0 chr10 23719679 23719954 -121869334 - AluJo SINE Alu -17 295 5 208 143 0 0 chr10 23720351 23720386 -121868902 + (A)n Simple_repeat Simple_repeat 1 35 0 2424 68 0 0 chr10 23720551 23720846 -121868442 + AluY SINE Alu 1 295 -16 180 0 0 0 chr10 23720988 23721008 -121868280 + (TA)n Simple_repeat Simple_repeat 2 21 0 430 259 63 52 chr10 23721692 23721866 -121867422 + MIR SINE MIR 17 192 -70 321 176 0 27 chr10 23721884 23721958 -121867330 + Charlie5 DNA MER1_type 28 99 -2513 369 90 333 0 chr10 23721969 23722047 -121867241 + Charlie5 DNA MER1_type 2234 2337 -275 2161 107 3 0 chr10 23722076 23722365 -121866923 - AluSp SINE Alu -23 290 1 67 65 0 0 chr10 23722511 23722634 -121866654 + AT_rich Low_complexity Low_complexity 1 123 0 21 0 0 0 chr10 23723388 23723409 -121865879 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr10 23725798 23725820 -121863468 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr10 23727124 23727145 -121862143 + AT_rich Low_complexity Low_complexity 1 21 0 2470 60 0 3 chr10 23727632 23727931 -121861357 - AluY SINE Alu -13 298 1 200 217 109 65 chr10 23728250 23728342 -121860946 + MIR SINE MIR 30 125 -83 340 233 89 11 chr10 23728475 23728565 -121860723 - MER91B DNA MER1_type -4 186 90 570 148 0 111 chr10 23728582 23728717 -121860571 - MER91B DNA MER1_type -60 130 11 28 29 0 0 chr10 23729097 23729132 -121860156 + AT_rich Low_complexity Low_complexity 1 35 0 1002 212 146 25 chr10 23729344 23729618 -121859670 + HERV16 LTR ERVL 953 1259 -3737 932 333 36 0 chr10 23729824 23730127 -121859161 + HERV16 LTR ERVL 1263 1576 -3420 641 303 17 0 chr10 23730142 23730320 -121858968 + HERV16 LTR ERVL 1681 1861 -3135 1541 302 42 58 chr10 23730355 23730567 -121858721 + HERV16 LTR ERVL 3126 3340 -2424 1842 181 7 0 chr10 23730567 23730871 -121858417 + AluJo SINE Alu 1 306 -6 1541 302 42 58 chr10 23730871 23731485 -121857803 + HERV16 LTR ERVL 3340 3939 -1825 1086 312 66 42 chr10 23731590 23732739 -121856549 + HERV16 LTR ERVL 4071 5346 -418 374 295 36 36 chr10 23733727 23733839 -121855449 + L2 LINE L2 3161 3272 0 366 107 0 0 chr10 23734164 23734220 -121855068 + (TG)n Simple_repeat Simple_repeat 1 56 0 219 234 19 84 chr10 23737097 23737204 -121852084 + MIR SINE MIR 134 233 -29 600 252 8 78 chr10 23737218 23737460 -121851828 + MIR SINE MIR 31 255 -7 317 194 56 0 chr10 23737778 23737850 -121851438 + MIR SINE MIR 116 191 -71 242 286 168 29 chr10 23738330 23738842 -121850446 - L1 LINE L1 -1098 5048 4476 240 290 117 19 chr10 23738978 23739192 -121850096 - L1 LINE L1 -1857 4289 4055 403 327 126 6 chr10 23739289 23739607 -121849681 + L1MC4a LINE L1 5527 5882 -1926 1503 82 0 0 chr10 23739616 23739798 -121849490 + AluSx SINE Alu 1 182 -130 22 35 0 0 chr10 23739844 23739873 -121849415 + AT_rich Low_complexity Low_complexity 1 29 0 305 293 73 58 chr10 23739954 23740145 -121849143 - L1 LINE L1 -2228 3918 3725 1429 191 75 14 chr10 23740182 23740464 -121848824 - AluJb SINE Alu -12 300 2 1875 87 8 4 chr10 23740757 23740998 -121848290 + AluY SINE Alu 55 296 -15 203 189 0 0 chr10 23741021 23741058 -121848230 + T-rich Low_complexity Low_complexity 1 37 0 597 237 124 27 chr10 23741281 23741467 -121847821 + MARNA DNA Mariner 299 502 -84 549 319 58 16 chr10 23743442 23743755 -121845533 - L1ME1 LINE L1 -15 6151 5826 763 175 15 0 chr10 23745310 23745447 -121843841 - L1PB4 LINE L1 -3 6153 6015 191 0 103 0 chr10 23745500 23745529 -121843759 + A-rich Low_complexity Low_complexity 1 32 0 429 262 117 44 chr10 23745605 23745811 -121843477 + L2 LINE L2 3092 3312 -1 540 180 9 63 chr10 23746602 23746713 -121842575 - L2 LINE L2 -2 3311 3207 21 36 0 0 chr10 23747177 23747205 -121842083 + AT_rich Low_complexity Low_complexity 1 28 0 594 264 29 11 chr10 23747610 23747784 -121841504 + MER5B DNA MER1_type 2 178 0 1117 193 11 0 chr10 23747813 23748000 -121841288 - MER5A DNA MER1_type 0 189 1 207 0 0 0 chr10 23748362 23748385 -121840903 + (CA)n Simple_repeat Simple_repeat 2 24 0 203 152 0 0 chr10 23748386 23748419 -121840869 + GA-rich Low_complexity Low_complexity 2 34 0 790 227 197 65 chr10 23749061 23749493 -121839795 - MLT1H LTR MaLR -8 541 53 1169 179 104 21 chr10 23749496 23749775 -121839513 + L1ME1 LINE L1 5864 6165 -1 542 254 87 6 chr10 23749835 23750008 -121839280 - MIR3 SINE MIR -13 195 9 2635 187 55 4 chr10 23751613 23752106 -121837182 - LTR53 LTR ERVL -1 518 1 195 309 84 104 chr10 23752240 23752538 -121836750 - L2 LINE L2 -12 3260 2969 436 260 127 100 chr10 23753189 23753520 -121835768 + L2 LINE L2 2932 3271 -1 1737 228 44 52 chr10 23753531 23754172 -121835116 + L1MC5 LINE L1 7296 7931 -30 543 240 65 54 chr10 23755068 23755302 -121833986 - MIR SINE MIR -2 260 20 1639 180 0 18 chr10 23755358 23755642 -121833646 - AluJo SINE Alu -20 292 14 230 277 85 11 chr10 23756313 23756407 -121832881 - MIR SINE MIR 0 262 162 2487 191 94 49 chr10 23757297 23757968 -121831320 + L1ME3A LINE L1 5461 6161 -9 1910 149 0 14 chr10 23758039 23758356 -121830932 + AluJb SINE Alu 1 313 0 1713 207 36 17 chr10 23758710 23759068 -121830220 - MLT1A1 LTR MaLR 0 365 1 831 149 0 30 chr10 23759373 23759507 -121829781 + AluJo SINE Alu 5 134 -178 710 278 5 43 chr10 23759798 23760007 -121829281 - MIR SINE MIR -1 261 61 338 203 203 117 chr10 23760017 23760048 -121829240 - MER5B DNA MER1_type -1 177 150 1776 139 16 36 chr10 23760048 23760227 -121829061 - AluJo SINE Alu -15 297 125 2516 64 0 0 chr10 23760227 23760538 -121828750 + AluY SINE Alu 1 311 0 1776 139 16 36 chr10 23760538 23760661 -121828627 - AluJo SINE Alu -187 125 1 338 203 203 117 chr10 23760661 23760792 -121828496 - MER5B DNA MER1_type -28 150 1 331 220 229 28 chr10 23760962 23761071 -121828217 + MIR3 SINE MIR 75 205 -3 1006 184 0 0 chr10 23762404 23762572 -121826716 - FRAM SINE Alu 0 176 9 257 281 41 48 chr10 23763634 23763780 -121825508 + L1ME LINE L1 5634 5778 -343 1954 134 0 13 chr10 23764129 23764427 -121824861 - AluJo SINE Alu -16 296 3 1993 115 45 3 chr10 23765701 23765989 -121823299 + AluJo SINE Alu 1 300 -12 34 0 0 0 chr10 23765991 23766025 -121823263 + AT_rich Low_complexity Low_complexity 1 34 0 1772 142 9 64 chr10 23766549 23766879 -121822409 + AluJo SINE Alu 1 312 0 352 248 119 55 chr10 23767094 23767296 -121821992 + LTR45 LTR ERV1 372 586 -17 243 0 0 0 chr10 23768050 23768077 -121821211 + (CA)n Simple_repeat Simple_repeat 1 27 0 191 175 25 0 chr10 23768174 23768214 -121821074 - L2 LINE L2 -22 3250 3210 697 264 63 38 chr10 23768361 23768600 -121820688 - MIR SINE MIR 0 262 18 1029 164 0 0 chr10 23768731 23768890 -121820398 - FRAM SINE Alu -22 154 1 2044 120 7 0 chr10 23768903 23769186 -121820102 - AluSx SINE Alu -25 287 3 1952 141 3 3 chr10 23769842 23770139 -121819149 - AluJo SINE Alu -15 297 1 261 0 0 0 chr10 23770688 23770717 -121818571 + (GA)n Simple_repeat Simple_repeat 2 30 0 191 61 30 0 chr10 23770784 23770817 -121818471 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 263 203 14 0 chr10 23771424 23771493 -121817795 + GA-rich Low_complexity Low_complexity 2 71 0 240 269 48 62 chr10 23771583 23771676 -121817612 - MIR SINE MIR -40 222 130 1709 141 17 47 chr10 23771676 23771975 -121817313 - AluJo SINE Alu -22 290 1 240 269 48 62 chr10 23771975 23772026 -121817262 - MIR SINE MIR -132 130 80 184 272 210 25 chr10 23772168 23772249 -121817039 + L3b LINE CR1 1485 1580 -3 727 230 0 73 chr10 23772890 23773138 -121816150 - L1MC5 LINE L1 -36 7925 7696 1719 180 3 16 chr10 23773261 23773567 -121815721 + AluJo SINE Alu 2 303 -9 517 194 142 0 chr10 23773617 23773751 -121815537 - MIR SINE MIR -28 234 82 2168 142 0 0 chr10 23774561 23774872 -121814416 - AluSx SINE Alu -1 311 1 851 129 8 23 chr10 23775328 23775460 -121813828 - FLAM_C SINE Alu -3 130 1 1702 180 50 0 chr10 23776644 23776986 -121812302 + AluJb SINE Alu 1 312 0 614 271 45 40 chr10 23777537 23777593 -121811695 - MIR SINE MIR -13 249 195 1742 188 109 0 chr10 23777593 23777922 -121811366 - MLT1A1 LTR MaLR 0 365 1 614 271 45 40 chr10 23777922 23778112 -121811176 - MIR SINE MIR -67 195 2 1816 158 0 58 chr10 23778637 23778967 -121810321 - AluJo SINE Alu -1 311 1 251 314 124 0 chr10 23779469 23779590 -121809698 + L2 LINE L2 3136 3271 -1 1590 152 20 12 chr10 23779800 23780079 -121809209 - AluJb SINE Alu 0 312 32 508 328 48 32 chr10 23780260 23780510 -121808778 - MIR SINE MIR 0 262 9 304 198 37 0 chr10 23782081 23782162 -121807126 + L1ME2 LINE L1 6080 6163 -1 1355 162 142 10 chr10 23782171 23782480 -121806808 + L1MC3 LINE L1 7436 7785 0 189 0 0 0 chr10 23786576 23786597 -121802691 + (TC)n Simple_repeat Simple_repeat 1 21 0 290 225 14 0 chr10 23787051 23787122 -121802166 - MIR SINE MIR -110 152 81 198 0 0 0 chr10 23787170 23787192 -121802096 + (CACCAT)n Simple_repeat Simple_repeat 3 24 0 1792 140 52 78 chr10 23787340 23787725 -121801563 + THE1C LTR MaLR 1 375 0 648 215 134 11 chr10 23788457 23788643 -121800645 - MIR SINE MIR 0 262 54 1468 155 8 8 chr10 23788764 23789003 -121800285 - AluJb SINE Alu -69 243 5 992 205 31 35 chr10 23789977 23790066 -121799222 + MER96B DNA MER1_type? 1 89 -328 1576 142 19 91 chr10 23790066 23790384 -121798904 - AluJb SINE Alu -17 295 1 992 205 31 35 chr10 23790384 23790552 -121798736 + MER96B DNA MER1_type? 89 257 -160 267 309 64 0 chr10 23791008 23791118 -121798170 - MIR SINE MIR -33 229 113 333 374 52 22 chr10 23791486 23791810 -121797478 - L1ME LINE L1 -532 5589 5256 475 273 57 19 chr10 23842379 23842588 -121746700 - L2 LINE L2 -727 2587 2371 312 278 103 67 chr10 23842657 23842880 -121746408 - L2 LINE L2 -843 2471 2241 564 139 10 20 chr10 23842914 23843015 -121746273 + FRAM SINE Alu 72 171 -5 1711 183 0 16 chr10 23843036 23843347 -121745941 + AluJo SINE Alu 1 306 -6 2528 59 0 3 chr10 23843350 23843654 -121745634 + AluY SINE Alu 1 303 -8 1454 165 24 24 chr10 23844232 23844486 -121744802 + AluJo SINE Alu 1 254 -58 199 75 0 50 chr10 23844513 23844553 -121744735 + (GAGAA)n Simple_repeat Simple_repeat 5 42 0 498 118 227 18 chr10 23844564 23844674 -121744614 + L1MB2 LINE L1 5692 5824 -356 1116 174 20 28 chr10 23844808 23845061 -121744227 + L1MB2 LINE L1 5910 6160 -11 1088 258 139 49 chr10 23845189 23845674 -121743614 - MLT1F1 LTR MaLR -18 549 23 236 224 15 15 chr10 23845685 23845752 -121743536 + HAL1b LINE L1 317 383 -965 353 306 38 19 chr10 23845768 23845928 -121743360 + HAL1b LINE L1 450 612 -736 794 225 48 5 chr10 23845944 23846131 -121743157 + MER58A DNA MER1_type 30 224 0 283 269 59 25 chr10 23846142 23846261 -121743027 + HAL1b LINE L1 639 761 -587 349 288 83 46 chr10 23846688 23847292 -121741996 + L1 LINE L1 2197 2822 -3324 22 0 0 0 chr10 23847317 23847339 -121741949 + AT_rich Low_complexity Low_complexity 1 22 0 2171 148 22 8 chr10 23847378 23847735 -121741553 + Tigger1 DNA MER2_type 1 362 -2056 5518 73 11 3 chr10 23847735 23848633 -121740655 - L1PA8 LINE L1 -208 5964 5061 15419 134 29 12 chr10 23848733 23849836 -121739452 - L1P3 LINE L1 -2674 3787 2705 201 39 0 0 chr10 23849836 23849862 -121739426 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 15419 134 29 12 chr10 23849862 23851697 -121737591 - L1P3 LINE L1 -3756 2705 779 503 242 51 32 chr10 23851750 23851907 -121737381 + MLT1D LTR MaLR 210 369 -136 870 225 64 0 chr10 23851907 23852094 -121737194 - L1M4 LINE L1 -527 6155 5957 3145 212 76 10 chr10 23852106 23852921 -121736367 - L1M4 LINE L1 -1092 5552 4684 623 207 57 7 chr10 23852923 23853063 -121736225 + MLT1A2 LTR MaLR 228 374 0 814 244 61 0 chr10 23853064 23853277 -121736011 - L1M4 LINE L1 -2028 4616 4391 784 201 29 42 chr10 23853297 23853536 -121735752 - L1M4 LINE L1 -3097 3547 3312 * 1700 205 37 42 chr10 23853513 23853875 -121735413 - L1M4 LINE L1 -4945 1597 1236 1761 148 31 17 chr10 23853875 23854165 -121735123 - AluSx SINE Alu -18 294 1 1700 205 37 42 chr10 23854165 23854284 -121735004 - L1M4 LINE L1 -5306 1236 1118 1772 90 32 111 chr10 23854576 23854919 -121734369 - L1P3 LINE L1 -3640 2821 2506 * 9775 130 28 3 chr10 23854916 23856405 -121732883 - L1P3 LINE L1 -4935 1526 1 653 241 151 25 chr10 23856553 23856752 -121732536 - MER58A DNA MER1_type 0 224 1 213 214 0 0 chr10 23856804 23856846 -121732442 + GA-rich Low_complexity Low_complexity 4 45 0 1275 157 0 14 chr10 23856850 23857066 -121732222 + AluJo SINE Alu 100 312 0 191 379 63 0 chr10 23857121 23857216 -121732072 - MER5A DNA MER1_type 0 189 89 450 235 10 0 chr10 23857411 23857509 -121731779 + MIR SINE MIR 44 142 -66 2305 110 0 3 chr10 23857781 23858090 -121731198 - AluSx SINE Alu -4 308 1 27 0 0 0 chr10 23858313 23858340 -121730948 + AT_rich Low_complexity Low_complexity 1 27 0 1291 136 4 75 chr10 23858347 23858575 -121730713 - AluJo SINE Alu -49 263 52 2261 103 15 29 chr10 23859663 23860003 -121729285 - MER1B DNA MER1_type -2 335 1 192 182 0 0 chr10 23862121 23862165 -121727123 + (CAT)n Simple_repeat Simple_repeat 2 45 0 216 0 0 0 chr10 23862195 23862219 -121727069 + (A)n Simple_repeat Simple_repeat 1 24 0 243 88 0 0 chr10 23862298 23862332 -121726956 + (CTCA)n Simple_repeat Simple_repeat 2 35 0 185 182 18 0 chr10 23862418 23862473 -121726815 + (CA)n Simple_repeat Simple_repeat 1 56 0 385 241 31 98 chr10 23864636 23864857 -121724431 + MIR SINE MIR 11 217 -45 477 50 0 0 chr10 23865367 23865427 -121723861 + (GA)n Simple_repeat Simple_repeat 1 60 0 2207 110 10 0 chr10 23866219 23866511 -121722777 - AluSp SINE Alu -18 295 1 278 272 39 10 chr10 23867113 23867216 -121722072 + (TATG)n Simple_repeat Simple_repeat 2 107 0 1737 146 4 15 chr10 23871580 23871854 -121717434 - AluJo SINE Alu -16 296 26 2046 138 3 0 chr10 23872294 23872584 -121716704 - AluJo SINE Alu -21 291 1 200 303 15 0 chr10 23873270 23873336 -121715952 + MIR SINE MIR 81 147 -61 1668 67 9 0 chr10 23874074 23874284 -121715004 + AluY SINE Alu 100 311 0 241 289 35 35 chr10 23877765 23877907 -121711381 + MIR SINE MIR 10 151 -111 266 281 164 20 chr10 23877955 23878101 -121711187 - MIR SINE MIR -56 206 40 216 0 0 0 chr10 23878259 23878283 -121711005 + (T)n Simple_repeat Simple_repeat 1 24 0 1848 167 0 16 chr10 23878323 23878629 -121710659 + AluJb SINE Alu 1 301 -11 610 223 94 5 chr10 23879669 23879871 -121709417 + MIR SINE MIR 15 234 -28 471 227 100 27 chr10 23880007 23880157 -121709131 + MIR SINE MIR 76 236 -26 1454 88 60 9 chr10 23880269 23880484 -121708804 + MER30 DNA MER1_type 4 229 -1 594 298 44 24 chr10 23886349 23886601 -121702687 + MIR SINE MIR 2 258 -4 237 268 105 42 chr10 23887462 23887652 -121701636 + L2 LINE L2 1804 2005 -1309 211 356 10 29 chr10 23887652 23887756 -121701532 + L2 LINE L2 3149 3250 -22 257 270 96 89 chr10 23887786 23887985 -121701303 + L2 LINE L2 2109 2305 -967 8723 56 9 4 chr10 23887985 23889050 -121700238 + MER11C LTR ERVK 1 1071 0 257 270 96 89 chr10 23889050 23889600 -121699688 + L2 LINE L2 2305 3154 -118 254 350 70 14 chr10 23890080 23890223 -121699065 - MIR3 SINE MIR -25 183 33 214 286 71 41 chr10 23891188 23891286 -121698002 - L2 LINE L2 -4 3268 3168 300 83 0 0 chr10 23892342 23892390 -121696898 + (TG)n Simple_repeat Simple_repeat 2 49 0 25 51 0 0 chr10 23892500 23892539 -121696749 + AT_rich Low_complexity Low_complexity 1 39 0 462 267 48 12 chr10 23892853 23893018 -121696270 - MIR SINE MIR -6 256 86 846 257 52 0 chr10 23893322 23893532 -121695756 + Charlie1a DNA MER1_type 2 222 -1233 4459 190 64 38 chr10 23893716 23894838 -121694450 + Charlie1a DNA MER1_type 301 1451 -4 784 250 9 47 chr10 23894851 23895031 -121694257 - MER58A DNA MER1_type -2196 224 53 1745 167 43 7 chr10 23895031 23895331 -121693957 + AluJb SINE Alu 1 311 -1 784 250 9 47 chr10 23895331 23895382 -121693906 - MER58A DNA MER1_type -2367 53 2 186 175 35 53 chr10 23895414 23895471 -121693817 + L2 LINE L2 2706 2761 -553 670 258 194 25 chr10 23895485 23895799 -121693489 + L2 LINE L2 2932 3298 -15 372 328 51 15 chr10 23897669 23897864 -121691424 + MIR SINE MIR 21 222 -40 2339 108 0 0 chr10 23898356 23898662 -121690626 + AluSg SINE Alu 2 307 -3 436 226 219 7 chr10 23899254 23899400 -121689888 + MIR SINE MIR 61 237 -25 2162 101 10 17 chr10 23899500 23899797 -121689491 + AluSx SINE Alu 10 304 -8 215 331 31 54 chr10 23899807 23899937 -121689351 - L2 LINE L2 -4 3309 3183 1151 168 66 1 chr10 23899986 23900352 -121688936 + MSTB1 LTR MaLR 1 432 0 216 275 64 28 chr10 23900425 23900534 -121688754 + L2 LINE L2 1597 1709 -1605 331 267 223 5 chr10 23900639 23900841 -121688447 + L1MC5 LINE L1 7620 7865 -96 240 362 107 26 chr10 23900887 23901431 -121687857 + L2 LINE L2 1698 2285 -1029 2100 137 0 9 chr10 23902321 23902636 -121686652 + AluSx SINE Alu 1 312 0 772 209 0 0 chr10 23903066 23903205 -121686083 + FLAM_C SINE Alu 2 140 -3 783 123 0 0 chr10 23904175 23904289 -121684999 + FLAM_A SINE Alu 29 142 0 1913 118 55 14 chr10 23904529 23904818 -121684470 + AluJo SINE Alu 1 301 -11 330 132 0 0 chr10 23905383 23905436 -121683852 + (GGGAA)n Simple_repeat Simple_repeat 4 56 0 189 0 0 0 chr10 23905589 23905610 -121683678 + (A)n Simple_repeat Simple_repeat 1 21 0 1832 150 49 3 chr10 23906653 23906939 -121682349 - AluSx SINE Alu -13 299 1 2416 97 0 0 chr10 23907575 23907874 -121681414 - AluSx SINE Alu -13 299 1 610 294 57 4 chr10 23907875 23908103 -121681185 - MIR SINE MIR -17 245 6 219 114 0 0 chr10 23909662 23909697 -121679591 + (TGAA)n Simple_repeat Simple_repeat 2 36 0 23 0 0 0 chr10 23909787 23909810 -121679478 + AT_rich Low_complexity Low_complexity 1 23 0 264 159 63 48 chr10 23910843 23910906 -121678382 - MARNA DNA Mariner -182 404 341 1444 172 89 61 chr10 23910943 23911304 -121677984 + MLT1A2 LTR MaLR 1 371 -3 586 315 35 13 chr10 23911479 23911623 -121677665 - MIR SINE MIR -7 255 103 1794 167 3 20 chr10 23911623 23911917 -121677371 + AluJo SINE Alu 1 289 -23 586 315 35 13 chr10 23911917 23912004 -121677284 - MIR SINE MIR -159 103 19 669 300 16 24 chr10 23913178 23913425 -121675863 - MIR SINE MIR -11 251 7 298 229 292 0 chr10 23915049 23915193 -121674095 - MER5A DNA MER1_type 0 189 4 1968 155 0 13 chr10 23915436 23915740 -121673548 - AluSx SINE Alu -11 301 2 237 310 9 60 chr10 23916219 23916335 -121672953 - MIR SINE MIR -65 197 88 1775 145 4 4 chr10 23916523 23916785 -121672503 + AluSx SINE Alu 7 268 -44 181 269 0 19 chr10 23916843 23916895 -121672393 + MIR SINE MIR 102 152 -110 2458 73 3 0 chr10 23916966 23917268 -121672020 + AluSp SINE Alu 1 303 -10 400 200 60 0 chr10 23917746 23917846 -121671442 - MIR3 SINE MIR -11 197 92 1744 190 7 0 chr10 23919118 23919423 -121669865 + AluJo SINE Alu 1 307 -5 14012 113 12 27 chr10 23920194 23922403 -121666885 - L1P LINE L1 -3393 2753 578 360 304 8 33 chr10 23922527 23922803 -121666485 + GA-rich Low_complexity Low_complexity 1 269 0 210 191 0 0 chr10 23922816 23922858 -121666430 + GA-rich Low_complexity Low_complexity 2 43 0 207 296 0 56 chr10 23922874 23922999 -121666289 + GA-rich Low_complexity Low_complexity 2 119 0 1227 200 29 18 chr10 23923719 23923999 -121665289 - L1MB8 LINE L1 -11 6167 5885 372 273 49 7 chr10 23924981 23925124 -121664164 - MIR3 SINE MIR -25 183 35 216 271 0 17 chr10 23925368 23925427 -121663861 - L2 LINE L2 -10 3303 3246 341 20 40 0 chr10 23925669 23925719 -121663569 + AluSx SINE Alu 249 300 0 2019 153 0 3 chr10 23926679 23927023 -121662265 + AluJo SINE Alu 5 347 0 745 173 8 0 chr10 23927272 23927405 -121661883 - FLAM_A SINE Alu 0 142 9 273 268 52 10 chr10 23927414 23927511 -121661777 - L2 LINE L2 -14 3299 3199 24 0 0 0 chr10 23927689 23927713 -121661575 + AT_rich Low_complexity Low_complexity 1 24 0 229 247 49 37 chr10 23928326 23928407 -121660881 + L2 LINE L2 3230 3311 -2 294 95 0 0 chr10 23928699 23928741 -121660547 + (CA)n Simple_repeat Simple_repeat 1 42 0 1691 119 0 24 chr10 23930780 23931031 -121658257 + AluJo SINE Alu 54 298 -14 1868 136 108 0 chr10 23931514 23931837 -121657451 - MER46B DNA MER2_type -3 233 1 1740 162 0 40 chr10 23933287 23933590 -121655698 + AluJo SINE Alu 1 291 -21 362 386 78 0 chr10 23933706 23933859 -121655429 + L2 LINE L2 3087 3251 -21 498 233 35 0 chr10 23935516 23935632 -121653656 + L1MEd LINE L1 829 948 -5424 293 265 58 73 chr10 23935720 23935815 -121653473 + L1MEd LINE L1 1307 1402 -5161 1690 146 19 62 chr10 23935815 23936137 -121653151 + AluJo SINE Alu 5 312 0 293 265 58 73 chr10 23936137 23936304 -121652984 + L1MEd LINE L1 1402 1691 -4872 225 317 203 32 chr10 23937469 23938575 -121650713 - L2 LINE L2 -952 2362 1068 307 260 14 14 chr10 23938973 23939046 -121650242 - MIR3 SINE MIR -4 204 132 1327 181 113 15 chr10 23939825 23940091 -121649197 - AluJo SINE Alu -20 292 1 477 306 78 17 chr10 23941026 23941206 -121648082 - MIR SINE MIR -31 231 41 2375 110 0 0 chr10 23944129 23944439 -121644849 - AluSx SINE Alu -2 310 1 197 359 23 23 chr10 23945090 23945218 -121644070 + MIR SINE MIR 18 145 -63 597 250 165 5 chr10 23945237 23945437 -121643851 + Charlie8 DNA MER1_type 34 265 -2152 281 318 70 23 chr10 23945853 23945982 -121643306 + MLT1K LTR MaLR 436 570 -18 254 267 20 96 chr10 23946699 23946845 -121642443 + HAL1 LINE L1 10 144 -2363 283 289 44 0 chr10 23947391 23947481 -121641807 + HAL1 LINE L1 808 901 -1606 255 300 120 15 chr10 23947567 23947767 -121641521 + HAL1 LINE L1 2132 2352 -155 232 296 37 65 chr10 23947778 23947886 -121641402 + L1MC1 LINE L1 5831 5935 -1873 2925 239 50 45 chr10 23948271 23949227 -121640061 + Charlie7 DNA MER1_type 213 1173 -1439 2360 217 84 52 chr10 23949255 23950061 -121639227 + Charlie7 DNA MER1_type 1575 2406 -206 360 0 0 0 chr10 23952294 23952334 -121636954 + (A)n Simple_repeat Simple_repeat 1 40 0 3294 140 32 10 chr10 23953159 23953755 -121635533 - MER4B LTR ERV1 -1 778 1 895 227 16 11 chr10 23954759 23954944 -121634344 + AluJo SINE Alu 2 187 -125 2836 222 107 23 chr10 23955890 23955917 -121633371 + L1MC4a LINE L1 6918 6941 -994 1390 251 8 51 chr10 23955917 23956308 -121632980 + MLT1A2 LTR MaLR 1 374 0 2836 222 107 23 chr10 23956308 23957111 -121632177 + L1MC4a LINE L1 6941 7935 0 428 307 74 35 chr10 23957688 23957919 -121631369 - MIR SINE MIR -8 254 15 182 211 197 13 chr10 23958654 23958730 -121630558 + L2 LINE L2 3173 3262 -10 1538 190 17 40 chr10 23959786 23960138 -121629150 + L1MC1 LINE L1 5989 6332 -1 199 311 198 34 chr10 23960509 23960747 -121628541 - L2 LINE L2 -842 2472 2196 1483 167 36 75 chr10 23960952 23961257 -121628031 - AluJb SINE Alu -9 303 11 394 190 170 13 chr10 23961617 23961742 -121627546 + MLT1H LTR MaLR 382 503 -46 21 36 0 0 chr10 23962901 23962929 -121626359 + AT_rich Low_complexity Low_complexity 1 28 0 252 0 0 0 chr10 23964718 23964746 -121624542 + (T)n Simple_repeat Simple_repeat 1 28 0 396 243 0 0 chr10 23965854 23965928 -121623360 - MIR3 SINE MIR -21 187 114 1586 171 10 36 chr10 23966139 23966443 -121622845 - AluJo SINE Alu -6 306 11 246 100 125 0 chr10 23966933 23966973 -121622315 + MLT1K LTR MaLR 523 567 -21 307 267 75 41 chr10 23967541 23967687 -121621601 - L3b LINE CR1 -154 1429 1279 887 214 52 19 chr10 23967930 23968140 -121621148 + MER58A DNA MER1_type 7 223 -1 668 316 147 22 chr10 23968142 23968639 -121620649 + L2 LINE L2 78 636 -2678 786 224 79 92 chr10 23968658 23969114 -121620174 + L2 LINE L2 2212 2661 -653 498 243 144 58 chr10 23969253 23969545 -121619743 + L2 LINE L2 2996 3312 -1 1771 184 3 16 chr10 23969967 23970283 -121619005 + AluJo SINE Alu 1 312 0 1505 149 0 108 chr10 23970390 23970725 -121618563 - AluJo SINE Alu -13 299 1 380 36 54 0 chr10 23971619 23971675 -121617613 + (CAAAA)n Simple_repeat Simple_repeat 1 59 0 312 137 0 0 chr10 23972012 23972063 -121617225 + (TG)n Simple_repeat Simple_repeat 2 52 0 220 292 0 0 chr10 23974689 23974737 -121614551 + L2 LINE L2 3137 3184 -88 1183 163 44 10 chr10 23974962 23975165 -121614123 - AluJb SINE Alu -17 295 86 437 268 13 51 chr10 23975665 23975822 -121613466 + L2 LINE L2 2202 2352 -962 202 275 104 75 chr10 23975917 23976263 -121613025 + L2 LINE L2 2622 2977 -337 2041 114 13 24 chr10 23976826 23977124 -121612164 - AluSx SINE Alu -17 295 1 1476 195 32 3 chr10 23977522 23977804 -121611484 + AluJo SINE Alu 8 297 -15 1627 96 167 0 chr10 23978338 23978601 -121610687 + AluSx SINE Alu 4 306 0 767 163 24 0 chr10 23979666 23979789 -121609499 + FLAM_C SINE Alu 3 128 -5 448 317 40 22 chr10 23980995 23981222 -121608066 + MLT1K LTR MaLR 134 364 -224 2191 101 34 0 chr10 23981233 23981531 -121607757 + AluSq SINE Alu 6 313 0 454 339 12 6 chr10 23983409 23983577 -121605711 - MIR SINE MIR -10 252 84 296 279 106 37 chr10 23983712 23983873 -121605415 + MIR3 SINE MIR 32 203 -5 1164 97 58 0 chr10 23984016 23984171 -121605117 + AluSq SINE Alu 1 164 -149 1008 114 7 0 chr10 23984365 23984505 -121604783 + AluSg/x SINE Alu 137 277 -35 259 329 34 68 chr10 23984746 23984892 -121604396 + L2 LINE L2 3122 3262 -10 2222 109 3 3 chr10 23984892 23985196 -121604092 + AluSx SINE Alu 1 304 -8 1148 209 35 14 chr10 23985534 23985816 -121603472 + L1MC1 LINE L1 6046 6333 0 1881 142 3 30 chr10 23986053 23986355 -121602933 - AluJo SINE Alu -7 305 12 233 219 229 31 chr10 23986393 23986489 -121602799 + L2 LINE L2 3199 3313 0 257 263 66 103 chr10 23987836 23988049 -121601239 + MIR SINE MIR 48 252 -10 278 73 0 0 chr10 23988164 23988205 -121601083 - L1ME4a LINE L1 -2 6119 6079 273 247 82 10 chr10 23988293 23988390 -121600898 - L1ME4a LINE L1 -56 6065 5962 253 304 71 40 chr10 23988488 23988712 -121600576 - L1ME4a LINE L1 -296 5825 5595 1284 89 0 0 chr10 23988727 23988907 -121600381 + (TA)n Simple_repeat Simple_repeat 1 180 0 303 173 0 0 chr10 23988912 23988964 -121600324 - L1MC4 LINE L1 -1339 6703 6652 324 247 136 6 chr10 23989635 23989797 -121599491 - L1ME4a LINE L1 0 6121 5939 1797 144 0 40 chr10 23990159 23990457 -121598831 - AluJo SINE Alu -26 286 1 336 200 0 0 chr10 23990492 23990572 -121598716 + (TA)n Simple_repeat Simple_repeat 1 80 0 248 294 59 0 chr10 23990601 23990703 -121598585 - L1ME4a LINE L1 -459 5662 5555 459 0 0 0 chr10 23992569 23992620 -121596668 + (TG)n Simple_repeat Simple_repeat 2 52 0 255 93 0 0 chr10 23992638 23992681 -121596607 + (CAGA)n Simple_repeat Simple_repeat 2 44 0 2028 116 0 0 chr10 23992681 23992949 -121596339 - AluSg SINE Alu -38 272 5 309 206 0 14 chr10 23993959 23994032 -121595256 + Tigger3(Golem) DNA MER2_type 2 73 -2956 * 719 184 0 0 chr10 23994030 23994155 -121595133 + Tigger3(Golem) DNA MER2_type 2903 3027 -2 1926 139 4 0 chr10 23994802 23995076 -121594212 + AluJb SINE Alu 1 275 -37 189 196 0 0 chr10 23995851 23995897 -121593391 + (TA)n Simple_repeat Simple_repeat 2 47 0 202 368 9 9 chr10 23996076 23996182 -121593106 - MIR SINE MIR 0 262 157 270 0 0 0 chr10 23996451 23996481 -121592807 + (CA)n Simple_repeat Simple_repeat 2 31 0 28 29 0 0 chr10 23996612 23996647 -121592641 + AT_rich Low_complexity Low_complexity 1 35 0 210 323 31 8 chr10 23997017 23997147 -121592141 + C-rich Low_complexity Low_complexity 2 134 0 268 324 84 78 chr10 23998730 23999026 -121590262 + L2 LINE L2 2926 3223 -49 199 316 38 13 chr10 23999050 23999129 -121590159 - MIR SINE MIR -105 103 23 31 0 0 0 chr10 23999303 23999334 -121589954 + AT_rich Low_complexity Low_complexity 1 31 0 213 39 0 0 chr10 24000083 24000109 -121589179 + (A)n Simple_repeat Simple_repeat 1 26 0 285 241 0 0 chr10 24000162 24000216 -121589072 - L2 LINE L2 -7 3306 3253 1547 179 34 30 chr10 24000327 24000450 -121588838 + AluJo SINE Alu 1 122 -190 279 0 0 0 chr10 24000450 24000481 -121588807 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 1547 179 34 30 chr10 24000481 24000654 -121588634 + AluJo SINE Alu 122 298 -14 2333 92 0 13 chr10 24000973 24001277 -121588011 + AluSg SINE Alu 1 300 -10 232 206 14 41 chr10 24001705 24001778 -121587510 + T-rich Low_complexity Low_complexity 3 73 0 478 290 81 11 chr10 24002364 24002550 -121586738 - L2 LINE L2 -20 3293 3095 375 198 164 0 chr10 24002670 24002786 -121586502 + MER20B DNA MER1_type 590 724 -59 233 232 137 21 chr10 24003222 24003317 -121585971 + L1MC5 LINE L1 7809 7914 -47 207 0 0 0 chr10 24004179 24004202 -121585086 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 416 271 70 25 chr10 24004386 24004585 -121584703 + L1MC4a LINE L1 5635 5842 -1966 3627 168 82 50 chr10 24004674 24005763 -121583525 + L1MB7 LINE L1 5057 6184 0 24 53 0 0 chr10 24005936 24005974 -121583314 + AT_rich Low_complexity Low_complexity 1 38 0 346 254 25 8 chr10 24005985 24006107 -121583181 + L1ME4a LINE L1 5995 6118 -3 368 246 36 0 chr10 24006256 24006366 -121582922 - MLT1H1 LTR MaLR -2 553 440 409 278 66 103 chr10 24006448 24007009 -121582279 + MER34 LTR ERV1 3 542 0 1773 195 0 3 chr10 24007059 24007366 -121581922 + AluJb SINE Alu 1 306 -6 24 0 0 0 chr10 24007366 24007390 -121581898 + AT_rich Low_complexity Low_complexity 1 24 0 1300 196 81 22 chr10 24007446 24007768 -121581520 - MER58B DNA MER1_type 0 341 1 246 32 0 0 chr10 24008730 24008761 -121580527 + (CAA)n Simple_repeat Simple_repeat 2 32 0 258 271 131 8 chr10 24009052 24009174 -121580114 + MIR SINE MIR 16 152 -110 360 0 0 0 chr10 24009503 24009543 -121579745 + (CA)n Simple_repeat Simple_repeat 1 40 0 1486 181 18 78 chr10 24011080 24011411 -121577877 + AluJo SINE Alu 1 311 -1 297 362 8 16 chr10 24011831 24011958 -121577330 - L3 LINE CR1 -118 1459 1334 1438 188 39 39 chr10 24012128 24012437 -121576851 - AluJo SINE Alu -3 309 1 938 237 69 74 chr10 24012871 24013212 -121576076 + L1MA9 LINE L1 5824 6165 -147 270 116 0 0 chr10 24013212 24013255 -121576033 + (CA)n Simple_repeat Simple_repeat 2 44 0 938 237 69 74 chr10 24013255 24013267 -121576021 + L1MA9 LINE L1 6165 6176 -136 1021 254 111 3 chr10 24013267 24013574 -121575714 + MER2 DNA MER2_type 4 343 -1 938 237 69 74 chr10 24013574 24013666 -121575622 + L1MA9 LINE L1 6176 6268 -44 1932 151 0 0 chr10 24014136 24014420 -121574868 - AluJo SINE Alu -28 284 1 1444 149 23 15 chr10 24015085 24015347 -121573941 - MER2 DNA MER2_type -81 264 1 771 175 67 129 chr10 24015791 24016031 -121573257 - MIR SINE MIR -35 227 3 301 285 234 0 chr10 24016340 24016498 -121572790 - MIR SINE MIR -66 196 2 3533 116 9 17 chr10 24017593 24018119 -121571169 - MER1A DNA MER1_type -1 526 5 621 274 6 6 chr10 24019641 24019820 -121569468 - MER8 DNA MER2_type -60 179 1 305 235 169 30 chr10 24019833 24019999 -121569289 + Charlie7 DNA MER1_type 13 201 -2411 1328 200 38 9 chr10 24020097 24020417 -121568871 + Charlie7 DNA MER1_type 1506 1834 -778 794 244 161 40 chr10 24020454 24021049 -121568239 + Charlie7 DNA MER1_type 1942 2608 -4 1165 186 140 19 chr10 24021284 24021591 -121567697 + MER2 DNA MER2_type 1 344 0 1652 185 0 34 chr10 24023101 24023399 -121565889 + AluJo SINE Alu 1 288 -24 288 53 0 0 chr10 24023415 24023453 -121565835 + (CA)n Simple_repeat Simple_repeat 2 39 0 714 230 43 25 chr10 24023985 24024220 -121565068 + L1ME LINE L1 5501 5739 -382 593 75 0 0 chr10 24024250 24024330 -121564958 - MADE1 DNA Mariner 0 80 1 228 253 28 118 chr10 24026178 24026356 -121562932 - MER91A DNA MER1_type 0 196 35 431 322 45 31 chr10 24027666 24027958 -121561330 + L1MEd LINE L1 509 804 -5315 1540 295 120 33 chr10 24028480 24028791 -121560497 - L2 LINE L2 0 3313 3031 2033 142 0 10 chr10 24028791 24029100 -121560188 + AluJo SINE Alu 1 306 -6 1540 295 120 33 chr10 24029100 24029961 -121559327 - L2 LINE L2 -282 3031 2035 222 313 0 0 chr10 24030006 24030089 -121559199 - L2 LINE L2 -1417 1897 1815 790 194 31 6 chr10 24030179 24030350 -121558938 + FRAM SINE Alu 1 41 0 738 199 161 0 chr10 24030468 24030629 -121558659 + MER3 DNA MER1_type 23 209 0 296 302 116 63 chr10 24030675 24030943 -121558345 - L2 LINE L2 -1856 1458 1177 324 0 0 0 chr10 24031094 24031130 -121558158 + (A)n Simple_repeat Simple_repeat 1 36 0 265 270 238 0 chr10 24031283 24031409 -121557879 - MER5A DNA MER1_type -2 187 32 2443 103 38 22 chr10 24031494 24031863 -121557425 - THE1C LTR MaLR 0 375 1 641 306 9 0 chr10 24031961 24032177 -121557111 + L2 LINE L2 2807 3024 -289 745 177 0 0 chr10 24032673 24032786 -121556502 + FLAM_C SINE Alu 6 118 -25 633 256 98 0 chr10 24032803 24033002 -121556286 - MIR SINE MIR 0 262 40 436 223 32 0 chr10 24033549 24033643 -121555645 + Charlie4 DNA MER1_type 1851 1947 -14 352 250 21 42 chr10 24034346 24034442 -121554846 + MER5A DNA MER1_type 16 109 -80 1373 189 4 15 chr10 24034484 24034744 -121554544 - AluJo SINE Alu -45 267 11 520 324 88 0 chr10 24034891 24035095 -121554193 - MIR SINE MIR -9 253 32 23 0 0 0 chr10 24035731 24035754 -121553534 + AT_rich Low_complexity Low_complexity 1 23 0 242 257 133 9 chr10 24037177 24037282 -121552006 - MIR3 SINE MIR -13 195 78 229 184 41 0 chr10 24037682 24037731 -121551557 + L2 LINE L2 3261 3311 -2 327 25 0 0 chr10 24038581 24038621 -121550667 + (TG)n Simple_repeat Simple_repeat 2 41 0 22 80 0 0 chr10 24039025 24039075 -121550213 + GC_rich Low_complexity Low_complexity 1 50 0 21 0 0 0 chr10 24039417 24039438 -121549850 + GC_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr10 24039551 24039579 -121549709 + GC_rich Low_complexity Low_complexity 1 28 0 267 133 0 0 chr10 24039780 24039825 -121549463 + (GGA)n Simple_repeat Simple_repeat 1 45 0 35 41 0 0 chr10 24040081 24040130 -121549158 + GC_rich Low_complexity Low_complexity 1 49 0 4015 181 40 32 chr10 24041357 24041548 -121547740 - MER6 DNA MER2_type -27 838 650 1812 168 0 13 chr10 24041548 24041858 -121547430 - AluJb SINE Alu -6 306 1 4015 181 40 32 chr10 24041858 24042254 -121547034 - MER6 DNA MER2_type -215 650 259 437 0 19 0 chr10 24042254 24042307 -121546981 + (CA)n Simple_repeat Simple_repeat 2 55 0 4015 181 40 32 chr10 24042307 24042341 -121546947 - MER6 DNA MER2_type -606 259 227 1901 164 0 10 chr10 24042341 24042651 -121546637 + AluJo SINE Alu 5 311 -1 4015 181 40 32 chr10 24042651 24042868 -121546420 - MER6 DNA MER2_type -638 227 -9 216 196 232 0 chr10 24043194 24043250 -121546038 + MIR SINE MIR 64 133 -75 1597 158 51 41 chr10 24043527 24043819 -121545469 + AluJo SINE Alu 3 297 -15 22 35 0 0 chr10 24044147 24044176 -121545112 + AT_rich Low_complexity Low_complexity 1 29 0 701 120 10 0 chr10 24044478 24044612 -121544676 - FRAM SINE Alu 0 181 47 915 179 12 0 chr10 24044704 24044866 -121544422 + FRAM SINE Alu 12 175 -1 1813 144 7 11 chr10 24045637 24045965 -121543323 - AluJb SINE Alu 0 327 1 364 210 50 8 chr10 24046966 24047085 -121542203 + L1ME4a LINE L1 5797 5920 -201 707 188 34 0 chr10 24047129 24047246 -121542042 + AluJo SINE Alu 16 136 -176 371 208 149 32 chr10 24047273 24047427 -121541861 + L1ME4a LINE L1 5939 6110 -11 24 32 0 0 chr10 24047808 24047839 -121541449 + AT_rich Low_complexity Low_complexity 1 31 0 1701 172 30 10 chr10 24047945 24048242 -121541046 + AluJo SINE Alu 1 303 -9 301 100 0 0 chr10 24048524 24048564 -121540724 - U2 snRNA snRNA -147 41 2 582 208 0 9 chr10 24048718 24048824 -121540464 - FRAM SINE Alu -80 96 1 1008 106 0 0 chr10 24049576 24049717 -121539571 - AluSg/x SINE Alu 0 310 170 227 336 182 14 chr10 24050268 24050411 -121538877 - L2 LINE L2 -2 3270 3104 1777 160 3 29 chr10 24050483 24050789 -121538499 + AluJo SINE Alu 6 303 -9 1123 144 77 0 chr10 24051002 24051197 -121538091 - AluJo SINE Alu -102 210 1 235 322 0 23 chr10 24051209 24051296 -121537992 - L1ME LINE L1 -233 5912 5828 433 198 75 0 chr10 24052175 24052281 -121537007 + MIR SINE MIR 139 252 -10 936 241 235 3 chr10 24052290 24052609 -121536679 - L2 LINE L2 0 3313 2921 1375 156 46 83 chr10 24052658 24052960 -121536328 + AluJo SINE Alu 11 301 -11 1022 201 51 33 chr10 24053052 24053266 -121536022 + MER58A DNA MER1_type 6 223 -1 467 297 104 69 chr10 24053322 24053814 -121535474 - MLT1K LTR MaLR -13 575 67 418 284 30 22 chr10 24053970 24054104 -121535184 - L1ME LINE L1 -543 5561 5427 2325 94 0 0 chr10 24054135 24054432 -121534856 - AluSg SINE Alu -13 297 1 1106 273 93 3 chr10 24054460 24054826 -121534462 - LTR16A LTR ERVL 0 450 52 2105 101 7 14 chr10 24055314 24055602 -121533686 - AluSx SINE Alu -26 286 1 334 279 78 27 chr10 24055752 24055971 -121533317 - L1ME LINE L1 -1548 4581 4352 2516 251 73 18 chr10 24056350 24057112 -121532176 - L1ME LINE L1 -1891 4238 3435 741 250 31 0 chr10 24057124 24057352 -121531936 - L1ME LINE L1 -3758 2371 2137 * 5825 181 27 30 chr10 24057333 24058251 -121531037 - L1MCa LINE L1 -1768 4796 3877 2390 81 3 0 chr10 24058251 24058547 -121530741 - AluY SINE Alu -14 297 1 5825 181 27 30 chr10 24058547 24059003 -121530285 - L1MCa LINE L1 -2687 3877 5 784 289 186 14 chr10 24059076 24059516 -121529772 + L2 LINE L2 2214 2729 -585 534 312 35 6 chr10 24059506 24059676 -121529612 + L2 LINE L2 2893 3067 -246 * 423 293 8 8 chr10 24059722 24059855 -121529433 - L1ME LINE L1 -5373 746 614 233 307 107 54 chr10 24059859 24060064 -121529224 - L1ME LINE L1 -5573 546 331 230 256 121 68 chr10 24060134 24060341 -121528947 - L1ME LINE L1 -5899 220 3 1374 193 3 49 chr10 24060429 24060537 -121528751 + AluJo SINE Alu 20 131 -181 2131 58 4 0 chr10 24060537 24060794 -121528494 - AluY SINE Alu -18 293 36 1374 193 3 49 chr10 24060794 24060990 -121528298 + AluJo SINE Alu 131 310 -2 1437 202 21 21 chr10 24061171 24061458 -121527830 - AluJo SINE Alu -25 287 1 570 222 108 121 chr10 24061474 24061849 -121527439 + L1ME1 LINE L1 5439 5825 -341 23 33 0 0 chr10 24061917 24061947 -121527341 + AT_rich Low_complexity Low_complexity 1 30 0 865 233 47 116 chr10 24061949 24062432 -121526856 + MER34B LTR ERV1 1 539 -3 1613 166 48 7 chr10 24062472 24062761 -121526527 + AluJo SINE Alu 1 301 -11 245 264 195 8 chr10 24063215 24063461 -121525827 - L1M4 LINE L1 -3650 2496 2205 738 240 90 36 chr10 24063495 24063774 -121525514 - MLT1H LTR MaLR -3 546 253 2263 103 7 0 chr10 24063817 24064117 -121525171 + AluSx SINE Alu 1 302 -10 2016 129 0 0 chr10 24064131 24064452 -121524836 + AluSx SINE Alu 5 325 0 23 0 0 0 chr10 24065519 24065542 -121523746 + AT_rich Low_complexity Low_complexity 1 23 0 2356 104 0 0 chr10 24065550 24065836 -121523452 + AluY SINE Alu 1 289 -22 225 0 0 0 chr10 24065836 24065861 -121523427 + (CA)n Simple_repeat Simple_repeat 2 26 0 2356 104 0 0 chr10 24065861 24065883 -121523405 + AluY SINE Alu 288 309 -2 1150 256 168 34 chr10 24066030 24066507 -121522781 - MLT1H LTR MaLR 0 549 9 2257 109 0 0 chr10 24066531 24066825 -121522463 + AluSx SINE Alu 2 295 -17 257 325 86 7 chr10 24067187 24067338 -121521950 + MIR3 SINE MIR 20 182 -26 21 36 0 0 chr10 24067436 24067464 -121521824 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr10 24067536 24067557 -121521731 + AT_rich Low_complexity Low_complexity 1 21 0 2077 124 0 7 chr10 24067670 24067998 -121521290 + AluSx SINE Alu 1 326 0 2543 140 40 5 chr10 24068941 24069342 -121519946 + MSTA LTR MaLR 3 417 -11 197 192 19 58 chr10 24069765 24069817 -121519471 - L2 LINE L2 -2 3311 3262 744 251 97 20 chr10 24070063 24070258 -121519030 + MLT1H LTR MaLR 1 210 -339 32286 35 1 2 chr10 24070272 24074917 -121514371 + L1PA4 LINE L1 1536 6174 0 1622 152 24 3 chr10 24075404 24075693 -121513595 - L1MA5A LINE L1 0 6297 6003 51 31 0 0 chr10 24075851 24075916 -121513372 + AT_rich Low_complexity Low_complexity 1 65 0 611 320 68 8 chr10 24076027 24076393 -121512895 + L1ME4a LINE L1 5509 5896 -225 486 0 0 0 chr10 24076728 24076782 -121512506 + (TATAA)n Simple_repeat Simple_repeat 4 57 0 489 244 115 13 chr10 24076999 24077155 -121512133 - MIR SINE MIR -56 206 35 458 261 94 20 chr10 24077508 24077673 -121511615 - MIR SINE MIR -64 144 3 239 206 0 128 chr10 24078524 24078626 -121510662 + L1MC4 LINE L1 6615 6703 -1339 601 202 9 0 chr10 24080699 24080813 -121508475 + FLAM_A SINE Alu 6 120 -22 21 0 0 0 chr10 24080821 24080842 -121508446 + AT_rich Low_complexity Low_complexity 1 21 0 1652 169 0 29 chr10 24080932 24081210 -121508078 - AluJo SINE Alu -20 292 23 225 241 0 17 chr10 24081346 24081404 -121507884 + Charlie4 DNA MER1_type 1901 1957 -4 362 267 52 26 chr10 24081709 24081825 -121507463 + MIR SINE MIR 95 213 -49 2154 117 10 0 chr10 24081874 24082172 -121507116 - AluSx SINE Alu -11 301 1 2130 67 0 0 chr10 24083560 24083813 -121505475 + AluY SINE Alu 45 297 -14 1734 162 0 88 chr10 24084144 24084520 -121504768 - MER2 DNA MER2_type -1 343 1 334 263 86 19 chr10 24084532 24084741 -121504547 - L1MC5 LINE L1 -102 7859 7637 225 0 0 0 chr10 24085022 24085047 -121504241 + (T)n Simple_repeat Simple_repeat 1 25 0 2306 103 3 3 chr10 24085082 24085394 -121503894 + AluSp SINE Alu 1 312 -1 1827 178 0 7 chr10 24085573 24085871 -121503417 + AluJb SINE Alu 1 296 -16 419 294 106 6 chr10 24085980 24086140 -121503148 + MIR SINE MIR 87 262 0 2343 97 3 3 chr10 24086547 24086857 -121502431 + AluY SINE Alu 1 310 -1 779 267 72 13 chr10 24086900 24087136 -121502152 - MIR SINE MIR 0 262 13 1831 175 0 7 chr10 24087270 24087567 -121501721 - AluJb SINE Alu -17 295 1 1830 141 0 61 chr10 24088376 24088517 -121500771 + AluJo SINE Alu 1 116 -196 2327 73 0 3 chr10 24088517 24088827 -121500461 + AluSc SINE Alu 1 309 0 1830 141 0 61 chr10 24088827 24088995 -121500293 + AluJo SINE Alu 116 293 -19 991 118 26 26 chr10 24089248 24089443 -121499845 + L1MA4 LINE L1 5997 6191 -109 498 99 129 0 chr10 24089547 24089648 -121499640 + L1MA4 LINE L1 6181 6294 -6 2216 131 0 0 chr10 24089674 24089986 -121499302 + AluSx SINE Alu 1 312 0 2296 114 0 0 chr10 24091296 24091604 -121497684 + AluSx SINE Alu 1 308 -4 721 284 64 8 chr10 24093323 24093559 -121495729 + MIR SINE MIR 14 262 0 243 0 0 0 chr10 24094273 24094300 -121494988 + (TG)n Simple_repeat Simple_repeat 2 28 0 1166 161 100 34 chr10 24094876 24095245 -121494043 - MSTC LTR MaLR 0 428 3 702 182 8 0 chr10 24095501 24095622 -121493666 - FLAM_A SINE Alu -10 132 11 318 325 149 5 chr10 24095667 24095855 -121493433 + MIR SINE MIR 5 219 -43 206 320 0 0 chr10 24095919 24095969 -121493319 - L2 LINE L2 -77 3236 3187 233 167 0 0 chr10 24096337 24096373 -121492915 - L2 LINE L2 -15 3298 3263 298 319 138 54 chr10 24096414 24096840 -121492448 - L2 LINE L2 -995 2319 1858 3977 74 10 21 chr10 24096861 24096938 -121492350 + L1PA10 LINE L1 5256 5332 -836 2608 30 7 3 chr10 24096938 24097241 -121492047 + AluY SINE Alu 1 304 -7 3977 74 10 21 chr10 24097241 24097860 -121491428 + L1PA10 LINE L1 5332 6008 -160 2566 105 3 3 chr10 24097979 24098352 -121490936 + L1PA10 LINE L1 5794 6166 -2 4964 136 20 20 chr10 24098352 24098573 -121490715 - L1PA16 LINE L1 -22 6144 5925 1378 197 55 24 chr10 24098573 24098862 -121490426 - AluJo SINE Alu -14 298 1 4964 136 20 20 chr10 24098862 24099566 -121489722 - L1PA16 LINE L1 -241 5925 5219 189 337 0 0 chr10 24099572 24099664 -121489624 - L2 LINE L2 -1434 1880 1789 737 246 140 5 chr10 24099768 24099975 -121489313 + MIR SINE MIR 28 262 0 891 248 53 0 chr10 24100881 24101107 -121488181 + MIR SINE MIR 12 249 -13 1703 148 8 0 chr10 24102491 24102741 -121486547 - AluSx SINE Alu -60 252 1 1828 113 126 92 chr10 24103012 24103426 -121485862 - MSTA LTR MaLR 0 428 1 21 95 0 0 chr10 24103560 24103623 -121485665 + AT_rich Low_complexity Low_complexity 1 63 0 2380 100 7 0 chr10 24104459 24104769 -121484519 + AluSx SINE Alu 1 312 0 263 250 12 25 chr10 24105290 24105370 -121483918 + L2 LINE L2 3161 3239 -74 823 167 0 0 chr10 24105393 24105519 -121483769 - FLAM_A SINE Alu -7 126 1 536 296 45 0 chr10 24105888 24106067 -121483221 + MIR SINE MIR 8 194 -68 396 0 0 0 chr10 24106293 24106337 -121482951 + (CA)n Simple_repeat Simple_repeat 2 45 0 255 61 0 0 chr10 24107232 24107265 -121482023 + (CA)n Simple_repeat Simple_repeat 2 34 0 2088 103 14 0 chr10 24107297 24107587 -121481701 - AluSx SINE Alu -18 294 1 387 297 69 0 chr10 24107709 24107810 -121481478 - L2 LINE L2 -11 3261 3154 1936 225 91 22 chr10 24107874 24108496 -121480792 - L1ME1 LINE L1 -323 5912 5242 759 99 8 30 chr10 24108499 24108630 -121480658 - L1MA6 LINE L1 -305 5995 5868 2038 115 7 11 chr10 24108640 24108946 -121480342 + AluSx SINE Alu 1 305 0 792 259 74 70 chr10 24108956 24109182 -121480106 - L1ME1 LINE L1 -972 5243 5019 1571 157 95 0 chr10 24109182 24109456 -121479832 + AluJb SINE Alu 5 304 -8 792 259 74 70 chr10 24109456 24109754 -121479534 - L1ME1 LINE L1 -1196 5019 4717 1586 125 42 0 chr10 24109754 24109994 -121479294 - AluSx SINE Alu -10 302 53 861 126 152 5 chr10 24110120 24110311 -121478977 - MER44D DNA MER2_type -97 512 24 4966 226 104 46 chr10 24110342 24111726 -121477562 - L1ME1 LINE L1 -1710 4505 3203 2382 103 0 0 chr10 24111726 24112028 -121477260 + AluSx SINE Alu 1 302 -10 4966 226 104 46 chr10 24112028 24113358 -121475930 - L1ME1 LINE L1 -3012 3203 1627 711 140 0 0 chr10 24113416 24113523 -121475765 + U6 snRNA snRNA 1 107 0 340 110 137 0 chr10 24113523 24113596 -121475692 + L1MB4 LINE L1 6098 6180 0 251 205 13 26 chr10 24113795 24113873 -121475415 + (TA)n Simple_repeat Simple_repeat 1 77 0 239 159 79 0 chr10 24113889 24113952 -121475336 - L1MC4 LINE L1 -196 7846 7779 2289 98 23 0 chr10 24113976 24114281 -121475007 - AluSp SINE Alu -1 312 1 5497 147 36 14 chr10 24114286 24115153 -121474135 - L1MA8 LINE L1 0 6291 5445 2034 83 72 4 chr10 24115153 24115430 -121473858 - AluSx SINE Alu -16 296 1 5497 147 36 14 chr10 24115430 24116339 -121472949 - L1MA8 LINE L1 -846 5445 4466 1046 156 39 9 chr10 24116337 24116568 -121472720 - L1MA8 LINE L1 -2527 3619 3382 * 897 221 96 63 chr10 24116573 24116967 -121472321 - L1MC4 LINE L1 -264 7778 7372 28 79 0 0 chr10 24116985 24117048 -121472240 + AT_rich Low_complexity Low_complexity 1 63 0 1203 100 12 0 chr10 24117381 24117541 -121471747 - AluSg/x SINE Alu -18 294 133 784 248 78 70 chr10 24117663 24118134 -121471154 - L1ME3A LINE L1 -5 6165 5692 941 265 30 3 chr10 24118285 24118617 -121470671 - L1ME3A LINE L1 -569 5601 5261 342 290 149 25 chr10 24119009 24119364 -121469924 - L1MC4a LINE L1 -1519 6289 5891 2397 212 36 18 chr10 24119373 24119778 -121469510 - L1ME1 LINE L1 -5 6161 5740 2301 143 20 79 chr10 24119778 24120233 -121469055 + MSTA LTR MaLR 1 428 0 2397 212 36 18 chr10 24120233 24120439 -121468849 - L1ME1 LINE L1 -426 5740 5539 1603 167 16 0 chr10 24120936 24121194 -121468094 - AluJo SINE Alu -15 297 36 180 111 0 0 chr10 24121698 24121725 -121467563 + (TATATG)n Simple_repeat Simple_repeat 3 29 0 227 257 0 14 chr10 24121732 24121806 -121467482 + L1MC4 LINE L1 6614 6686 -1356 2378 85 0 3 chr10 24121908 24122202 -121467086 + AluSg SINE Alu 1 293 -17 1845 182 7 0 chr10 24122341 24122637 -121466651 + AluJb SINE Alu 1 298 -14 500 120 0 11 chr10 24122711 24122803 -121466485 + (TCTA)n Simple_repeat Simple_repeat 4 94 0 271 146 0 36 chr10 24123206 24123261 -121466027 + MLT1H LTR MaLR 123 175 -374 240 204 37 0 chr10 24123412 24123466 -121465822 + MER63 DNA MER1_type 3 684 -378 1144 147 0 0 chr10 24123486 24123656 -121465632 + AluJo SINE Alu 126 295 -17 1410 206 43 45 chr10 24123676 24123943 -121465345 + MER63 DNA MER1_type 682 948 -113 1888 176 3 6 chr10 24123943 24124256 -121465032 - AluSx SINE Alu 0 312 1 1410 206 43 45 chr10 24124256 24124325 -121464963 + MER63 DNA MER1_type 948 1019 -42 2088 121 8 51 chr10 24124325 24124696 -121464592 + THE1A LTR MaLR 1 355 0 1410 206 43 45 chr10 24124696 24124732 -121464556 + MER63 DNA MER1_type 1019 1054 -7 709 243 7 0 chr10 24125458 24125602 -121463686 - FRAM SINE Alu -30 146 2 1855 184 7 3 chr10 24125652 24125962 -121463326 - AluJb SINE Alu -1 311 1 1906 123 0 42 chr10 24126813 24127144 -121462144 - AluSq SINE Alu 0 313 1 1534 191 0 25 chr10 24129059 24129341 -121459947 - AluJo SINE Alu -13 299 25 198 103 0 0 chr10 24131637 24131666 -121457622 + (CA)n Simple_repeat Simple_repeat 2 30 0 2787 218 34 57 chr10 24131784 24132773 -121456515 - L1ME1 LINE L1 0 6166 5215 1809 134 0 46 chr10 24132773 24133057 -121456231 - AluSx SINE Alu -7 305 35 2787 218 34 57 chr10 24133057 24133258 -121456030 - L1ME1 LINE L1 -951 5215 5011 437 195 58 0 chr10 24133267 24133354 -121455934 - MIR SINE MIR -13 249 158 6003 116 3 17 chr10 24133414 24133889 -121455399 - L1PB1 LINE L1 0 6151 5671 2149 132 0 13 chr10 24133889 24134200 -121455088 - AluSx SINE Alu -4 308 2 6003 116 3 17 chr10 24134200 24134774 -121454514 - L1PB1 LINE L1 -480 5671 5116 1705 172 67 65 chr10 24135067 24135498 -121453790 - MSTB1 LTR MaLR 0 432 1 2201 118 7 0 chr10 24136208 24136514 -121452774 + AluSx SINE Alu 4 311 -1 1842 154 0 20 chr10 24137273 24137572 -121451716 - AluJo SINE Alu -19 293 1 290 323 232 11 chr10 24138072 24138335 -121450953 - L2 LINE L2 -556 2758 2438 992 131 0 0 chr10 24138443 24138573 -121450715 + FLAM_C SINE Alu 1 130 -3 978 130 0 0 chr10 24140464 24140595 -121448693 - FLAM_C SINE Alu -2 131 1 589 272 62 36 chr10 24140980 24141175 -121448113 + MLT1I LTR MaLR 7 206 -203 2392 99 0 0 chr10 24141187 24141491 -121447797 - AluSx SINE Alu -8 304 1 293 186 68 0 chr10 24141559 24141618 -121447670 + MLT1I LTR MaLR 347 409 0 904 205 12 1 chr10 24141737 24141924 -121447364 - MLT1B LTR MaLR -14 374 173 804 159 0 16 chr10 24141942 24142068 -121447220 - FLAM_A SINE Alu -8 134 11 361 210 97 32 chr10 24142081 24142205 -121447083 - MLT1B LTR MaLR -213 177 46 2274 105 0 0 chr10 24142255 24142550 -121446738 - AluSc SINE Alu -14 295 1 1709 153 45 11 chr10 24142553 24142840 -121446448 - AluJb SINE Alu -15 297 1 23 68 0 0 chr10 24143322 24143366 -121445922 + AT_rich Low_complexity Low_complexity 1 44 0 225 0 0 0 chr10 24143523 24143548 -121445740 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 208 68 23 45 chr10 24144159 24144203 -121445085 + (CATTA)n Simple_repeat Simple_repeat 3 45 0 212 315 0 0 chr10 24145301 24145355 -121443933 + L2 LINE L2 3137 3190 -82 957 189 6 6 chr10 24145546 24145705 -121443583 - FRAM SINE Alu -4 162 4 387 0 0 0 chr10 24146667 24146710 -121442578 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 2183 101 0 0 chr10 24146713 24146990 -121442298 - AluSx SINE Alu -31 281 5 2112 176 89 5 chr10 24147309 24147701 -121441587 + MSTB1 LTR MaLR 8 432 0 289 224 82 35 chr10 24148136 24148221 -121441067 + MLT1I LTR MaLR 278 366 -43 310 194 25 6 chr10 24148221 24148306 -121440982 - L1M4c LINE L1 -4907 1373 1292 1224 201 37 15 chr10 24148425 24148698 -121440590 - MLT1C LTR MaLR 0 467 189 984 167 35 48 chr10 24148725 24148952 -121440336 - MLT1C LTR MaLR -243 224 1 6104 83 11 11 chr10 24149488 24149852 -121439436 - L1PB1 LINE L1 0 6151 5788 450 0 0 0 chr10 24149852 24149902 -121439386 + (TA)n Simple_repeat Simple_repeat 1 50 0 6104 83 11 11 chr10 24149902 24150381 -121438907 - L1PB1 LINE L1 -362 5789 5308 2393 181 135 34 chr10 24150475 24151134 -121438154 + LTR48 LTR ERV1 8 766 -21 1680 285 73 48 chr10 24151148 24151814 -121437474 + L1MEc LINE L1 289 996 -5400 2130 138 0 0 chr10 24151814 24152112 -121437176 + AluSg SINE Alu 1 298 -12 1680 285 73 48 chr10 24152112 24152562 -121436726 + L1MEc LINE L1 996 1433 -4963 3863 277 39 42 chr10 24152580 24153731 -121435557 + L1PBa LINE L1 3 1148 -5715 2114 122 66 12 chr10 24153731 24154051 -121435237 + MER1B DNA MER1_type 1 337 0 3863 277 39 42 chr10 24154051 24154547 -121434741 + L1PBa LINE L1 1148 1644 -5219 449 318 108 49 chr10 24154937 24155160 -121434128 - MIR SINE MIR -25 237 2 2184 60 0 4 chr10 24155837 24156106 -121433182 + AluY SINE Alu 43 310 -1 24 53 0 0 chr10 24156529 24156567 -121432721 + AT_rich Low_complexity Low_complexity 1 38 0 260 301 68 23 chr10 24157521 24157654 -121431634 - MIR SINE MIR -6 256 118 1926 137 57 36 chr10 24157662 24157998 -121431290 - MER61A LTR ERV1 0 343 1 22601 79 33 28 chr10 24157998 24161629 -121427659 - MER61A-int LTR ERV1 0 5217 1475 1253 81 29 48 chr10 24161629 24161814 -121427474 - AluY SINE Alu -4 307 125 261 0 0 0 chr10 24161814 24161843 -121427445 + (TG)n Simple_repeat Simple_repeat 2 30 0 1253 81 29 48 chr10 24161843 24161867 -121427421 - AluY SINE Alu -186 125 102 8353 83 8 48 chr10 24162285 24164188 -121425100 + L1PA6 LINE L1 4291 6154 0 29134 70 6 2 chr10 24164196 24167923 -121421365 + L1PA4 LINE L1 7 3745 -2401 8203 45 9 2 chr10 24167923 24169640 -121419648 + L1PA4 LINE L1 4428 6151 -4 3350 216 6 11 chr10 24169640 24170562 -121418726 - L1 LINE L1 -3393 2753 1838 15399 39 1 4 chr10 24170706 24172561 -121416727 - L1P LINE L1 -811 5335 3487 14048 138 8 23 chr10 24172558 24174834 -121414454 - L1P LINE L1 -3892 2254 13 * 11577 189 26 11 chr10 24174841 24177850 -121411438 + L1PB3 LINE L1 2743 5806 -348 1991 188 88 32 chr10 24177850 24178314 -121410974 + LTR2B LTR ERV1 1 490 0 11577 189 26 11 chr10 24178314 24178668 -121410620 + L1PB3 LINE L1 5806 6153 -1 28 0 0 0 chr10 24178668 24178696 -121410592 + AT_rich Low_complexity Low_complexity 1 28 0 443 269 13 45 chr10 24179620 24179776 -121409512 + MER77 LTR ERV1 55 205 -400 958 274 40 105 chr10 24179821 24180393 -121408895 + MER21B LTR ERV1 134 668 -195 270 86 0 0 chr10 24180385 24180420 -121408868 + MER39 LTR ERV1 627 661 -46 * 2384 153 206 6 chr10 24180419 24180890 -121408398 - MER39 LTR ERV1 -15 692 128 651 214 0 126 chr10 24180896 24181111 -121408177 - MER51C LTR ERV1 0 640 453 537 154 144 0 chr10 24181443 24181547 -121407741 - MER39 LTR ERV1 -588 119 1 331 307 92 23 chr10 24181698 24181916 -121407372 - L2 LINE L2 -340 2974 2742 2058 113 137 32 chr10 24182163 24182711 -121406577 + MER4A LTR ERV1 1 664 0 537 320 31 9 chr10 24182713 24182938 -121406350 - L2 LINE L2 -904 2410 2181 2464 116 82 64 chr10 24182973 24183411 -121405877 - MER4E LTR ERV1 0 779 334 1085 83 0 7 chr10 24183412 24183556 -121405732 - MER4E LTR ERV1 -622 144 2 2605 175 40 61 chr10 24183557 24184163 -121405125 - LTR26E LTR ERV1 -29 593 1 600 161 12 125 chr10 24184326 24184451 -121404837 + Ricksha DNA DNA 2 73 -1108 1668 156 21 7 chr10 24184451 24184734 -121404554 + AluJb SINE Alu 3 289 -23 600 161 12 125 chr10 24184734 24184776 -121404512 + Ricksha DNA DNA 73 118 -1063 1579 144 12 75 chr10 24184796 24184876 -121404412 + Ricksha DNA DNA 2174 2257 -989 2408 78 14 0 chr10 24184876 24185172 -121404116 + AluY SINE Alu 1 300 -11 1579 144 12 75 chr10 24185172 24185410 -121403878 + Ricksha DNA DNA 2257 2472 -774 2070 165 41 33 chr10 24185653 24186197 -121403091 - MLT2A2 LTR ERVL 0 554 1 2112 109 20 3 chr10 24186617 24186911 -121402377 - AluSq SINE Alu -14 299 1 229 280 37 19 chr10 24187599 24187706 -121401582 + L1M4 LINE L1 5188 5296 -850 842 158 9 59 chr10 24188259 24188480 -121400808 + AluJb SINE Alu 1 210 -102 4072 119 20 31 chr10 24188852 24189213 -121400075 - L1PB1 LINE L1 -4 6147 5796 420 71 0 0 chr10 24189213 24189269 -121400019 + (CA)n Simple_repeat Simple_repeat 2 57 0 4072 119 20 31 chr10 24189269 24189607 -121399681 - L1PB1 LINE L1 -355 5796 5456 1422 235 31 52 chr10 24189966 24190055 -121399233 - L1MC/D LINE L1 -569 5790 5701 2318 179 19 27 chr10 24190055 24190468 -121398820 + MLT2D LTR ERVL 5 414 0 1422 235 31 52 chr10 24190468 24190854 -121398434 - L1MC/D LINE L1 -658 5701 5325 1813 166 80 19 chr10 24191223 24191596 -121397692 + LTR2B LTR ERV1 95 490 0 322 275 0 0 chr10 24191606 24191686 -121397602 - L1MD2 LINE L1 -260 6099 6020 787 172 48 126 chr10 24191686 24192058 -121397230 + LTR9B LTR ERV1 1 343 -301 23 86 0 0 chr10 24192235 24192293 -121396995 + GC_rich Low_complexity Low_complexity 1 58 0 5279 92 0 9 chr10 24192474 24193166 -121396122 - L1PA6 LINE L1 0 6154 5469 910 232 29 51 chr10 24193504 24193575 -121395713 - L1MC/D LINE L1 -1373 4773 4702 2169 125 0 0 chr10 24193575 24193871 -121395417 - AluSx SINE Alu -16 296 1 910 232 29 51 chr10 24193871 24194114 -121395174 - L1MC/D LINE L1 -1444 4702 4466 388 264 39 16 chr10 24194116 24194245 -121395043 + MER20B DNA MER1_type 648 779 -4 614 288 107 55 chr10 24194266 24194631 -121394657 - L2 LINE L2 -1159 2155 1772 333 248 51 8 chr10 24194780 24194897 -121394391 + L1MA10 LINE L1 6212 6333 -1 3813 144 17 8 chr10 24196062 24197049 -121392239 - L1 LINE L1 -3503 4062 3066 26 0 0 0 chr10 24198660 24198686 -121390602 + AT_rich Low_complexity Low_complexity 1 26 0 1996 132 0 0 chr10 24198727 24199007 -121390281 + AluSx SINE Alu 1 280 -32 256 286 97 65 chr10 24199209 24199671 -121389617 - L1MC/D LINE L1 -1756 4390 3914 1632 191 24 3 chr10 24201213 24201507 -121387781 + AluJo SINE Alu 1 300 -12 726 309 100 28 chr10 24202205 24202594 -121386694 + LTR33 LTR ERVL 105 521 0 251 373 60 15 chr10 24202673 24202807 -121386481 - L2 LINE L2 -7 3265 3126 192 131 16 131 chr10 24203003 24203064 -121386224 - L2 LINE L2 -188 3084 3031 618 219 39 67 chr10 24203987 24204344 -121384944 - L1MC5 LINE L1 -32 7929 7583 * 4281 69 23 0 chr10 24204342 24204904 -121384384 + L1P LINE L1 3917 4491 -1655 310 221 295 0 chr10 24205066 24205188 -121384100 + MIR SINE MIR 76 233 -29 241 340 43 0 chr10 24207306 24207400 -121381888 - L2 LINE L2 -5 3308 3211 8385 105 3 1 chr10 24208183 24209248 -121380040 - THE1-int LTR MaLR -10 1570 501 195 69 0 0 chr10 24209248 24209277 -121380011 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 8385 105 3 1 chr10 24209277 24209337 -121379951 - THE1-int LTR MaLR -1079 501 443 338 264 169 14 chr10 24210972 24211120 -121378168 + MLT1H LTR MaLR 379 549 0 289 255 41 10 chr10 24211120 24211218 -121378070 + MLT1H-int LTR MaLR 1 101 -1634 1219 187 84 8 chr10 24211869 24212131 -121377157 + AluJo SINE Alu 1 282 -30 1570 108 31 4 chr10 24212502 24212762 -121376526 - L1PBa LINE L1 -4246 2617 2351 * 2117 199 20 11 chr10 24212753 24213302 -121375986 - L1PBa LINE L1 -5073 1790 1093 512 161 0 73 chr10 24213830 24213954 -121375334 - Tigger1 DNA MER2_type 0 2418 2304 4256 178 35 70 chr10 24213955 24215033 -121374255 + L1M1 LINE L1 11 1050 -6515 238 289 12 24 chr10 24216574 24216657 -121372631 + MLT1H LTR MaLR 210 291 -258 874 158 0 46 chr10 24218078 24218230 -121371058 - AluSq/x SINE Alu -167 145 1 1613 156 22 0 chr10 24218230 24218505 -121370783 - L1M4 LINE L1 -374 5810 5530 1579 217 27 12 chr10 24218505 24219056 -121370232 - L1MCa LINE L1 -4320 2287 1538 2539 134 70 20 chr10 24219804 24220245 -121369043 + LTR32 LTR ERVL 9 471 0 198 302 72 22 chr10 24220249 24220388 -121368900 + MIR SINE MIR 105 250 -12 482 198 12 0 chr10 24220574 24220655 -121368633 - MER44D DNA MER2_type -623 82 1 * 3470 90 26 80 chr10 24220653 24221113 -121368175 + MER41A LTR ERV1 1 425 -129 1719 133 0 16 chr10 24221113 24221361 -121367927 - AluSx SINE Alu -63 249 6 3470 90 26 80 chr10 24221361 24221477 -121367811 + MER41A LTR ERV1 425 546 -8 355 271 129 14 chr10 24221791 24221931 -121367357 - MIR SINE MIR -59 203 48 940 103 7 44 chr10 24221966 24222102 -121367186 + FRAM SINE Alu 16 146 -30 2846 181 42 9 chr10 24222202 24222756 -121366532 + LTR49 LTR ERV1 1 572 -23 477 0 0 0 chr10 24223229 24223282 -121366006 + (T)n Simple_repeat Simple_repeat 1 53 0 890 117 86 12 chr10 24223295 24223458 -121365830 + LTR49 LTR ERV1 421 595 0 385 205 51 0 chr10 24223459 24223537 -121365751 + MER92B LTR ERV1 62 143 -493 1463 150 59 4 chr10 24223538 24223791 -121365497 + LTR24C LTR ERV1 1 267 -368 492 148 0 83 chr10 24224312 24224420 -121364868 - L1PA11 LINE L1 0 6174 6076 1756 128 103 36 chr10 24224423 24224781 -121364507 + LTR24C LTR ERV1 251 632 -3 584 178 9 89 chr10 24224798 24225011 -121364277 + MER92B LTR ERV1 152 347 -289 387 281 25 8 chr10 24225417 24225538 -121363750 + L2 LINE L2 3159 3281 -32 320 214 25 31 chr10 24226051 24226210 -121363078 + (TA)n Simple_repeat Simple_repeat 1 158 0 476 268 52 30 chr10 24226406 24226675 -121362613 - L1M4 LINE L1 -935 5211 4937 416 201 48 54 chr10 24226682 24226857 -121362431 - MLT1I LTR MaLR 0 409 284 512 284 113 37 chr10 24227093 24227666 -121361622 - L1M4 LINE L1 -1214 4932 4316 1549 168 9 65 chr10 24228109 24228430 -121360858 + AluJo SINE Alu 1 303 -9 262 290 170 0 chr10 24229006 24229106 -121360182 + L2 LINE L2 3138 3254 -18 306 290 65 71 chr10 24230109 24230278 -121359010 + MER5B DNA MER1_type 4 171 -7 1822 197 57 20 chr10 24230797 24231147 -121358141 + MLT1A1 LTR MaLR 1 363 -2 1619 218 11 84 chr10 24231976 24232227 -121357061 + MLT1C LTR MaLR 25 226 -241 2549 93 41 11 chr10 24232227 24232591 -121356697 - THE1C LTR MaLR 0 375 1 1619 218 11 84 chr10 24232591 24232817 -121356471 + MLT1C LTR MaLR 226 467 0 380 144 89 67 chr10 24233333 24233423 -121355865 - L1MC/D LINE L1 -428 5814 5723 1252 171 28 116 chr10 24233425 24233582 -121355706 - MER63B DNA MER1_type -731 331 222 1869 179 127 24 chr10 24233582 24234040 -121355248 + LTR22 LTR ERVK 1 505 -4 1252 171 28 116 chr10 24234040 24234245 -121355043 - MER63B DNA MER1_type -840 222 1 2202 123 40 40 chr10 24234326 24234701 -121354587 + THE1C LTR MaLR 1 375 0 239 180 0 20 chr10 24235228 24235278 -121354010 - MLT1I LTR MaLR -61 329 281 691 253 119 16 chr10 24235559 24235753 -121353535 + MIR SINE MIR 49 262 0 237 65 0 0 chr10 24236016 24236047 -121353241 + (GGA)n Simple_repeat Simple_repeat 1 31 0 1142 180 83 80 chr10 24236352 24236713 -121352575 - MLT1A2 LTR MaLR 0 374 13 207 69 0 0 chr10 24237617 24237646 -121351642 + (TTTTA)n Simple_repeat Simple_repeat 1 29 0 1172 53 0 0 chr10 24237651 24237803 -121351485 - L1PA5 LINE L1 -40 6114 5963 2372 232 41 5 chr10 24237905 24238543 -121350745 - L1ME1 LINE L1 -43 6123 5463 2069 138 0 10 chr10 24238705 24239003 -121350285 + AluSx SINE Alu 1 295 -17 1355 122 105 8 chr10 24239947 24240194 -121349094 - MSTA LTR MaLR 0 428 158 2148 188 62 9 chr10 24240332 24240885 -121348403 - L1PBa LINE L1 -4584 1620 1039 4996 163 25 13 chr10 24240929 24241840 -121347448 - L1PBa LINE L1 -5281 923 2 277 214 143 32 chr10 24242007 24242133 -121347155 - L2 LINE L2 -774 2540 2401 633 265 41 103 chr10 24242619 24243223 -121346065 + L1MEc LINE L1 310 876 -5520 * 1132 237 49 20 chr10 24243215 24243700 -121345588 + L1MEc LINE L1 2096 2562 -3653 489 201 0 29 chr10 24243708 24243847 -121345441 + L1M4 LINE L1 4388 4522 -1624 251 133 22 0 chr10 24243855 24243900 -121345388 + L1ME LINE L1 5530 5575 -587 1960 120 10 10 chr10 24243920 24244211 -121345077 - AluJb SINE Alu -21 291 1 2832 117 28 9 chr10 24244214 24244675 -121344613 + Tigger1 DNA MER2_type 1799 2268 -150 802 223 7 0 chr10 24244677 24244825 -121344463 + AluJo SINE Alu 3 151 -161 509 146 10 0 chr10 24245010 24245106 -121344182 + L1M4 LINE L1 4615 4711 -1435 1577 175 0 15 chr10 24245107 24245370 -121343918 + AluJo SINE Alu 1 259 -53 277 345 82 0 chr10 24245505 24245615 -121343673 - MER91C DNA MER1_type -13 127 9 2197 202 42 49 chr10 24245997 24246612 -121342676 + L1MC4a LINE L1 7006 7616 -192 1695 208 0 16 chr10 24247720 24248028 -121341260 + AluJb SINE Alu 1 303 -9 250 396 135 5 chr10 24248956 24249163 -121340125 + L2 LINE L2 2815 3048 -224 2701 88 3 8 chr10 24249390 24249754 -121339534 - THE1B LTR MaLR 0 364 3 1909 159 10 7 chr10 24250710 24251005 -121338283 - AluSx SINE Alu -16 296 1 350 181 72 0 chr10 24251790 24251873 -121337415 + FLAM_A SINE Alu 40 128 -5 2542 111 3 19 chr10 24252017 24252387 -121336901 - THE1B LTR MaLR 0 364 1 11148 98 12 25 chr10 24252387 24253987 -121335301 - THE1B-int LTR MaLR 0 1580 1 2451 126 0 21 chr10 24253987 24254359 -121334929 - THE1B LTR MaLR 0 364 1 21 57 0 0 chr10 24254983 24255018 -121334270 + AT_rich Low_complexity Low_complexity 1 35 0 2538 99 35 17 chr10 24255248 24255651 -121333637 - MSTA LTR MaLR 0 428 19 1669 175 68 11 chr10 24257446 24257800 -121331488 - MLT1A2 LTR MaLR 0 374 1 674 124 0 0 chr10 24258597 24258694 -121330594 - FRAM SINE Alu -55 121 25 327 113 0 13 chr10 24258734 24258806 -121330482 + Alu SINE Alu 247 301 -1 213 65 0 0 chr10 24258847 24258878 -121330410 + (TG)n Simple_repeat Simple_repeat 2 32 0 2401 84 0 3 chr10 24260771 24261079 -121328209 + AluSc SINE Alu 1 307 -2 1166 158 36 10 chr10 24261372 24261568 -121327720 - AluJo SINE Alu -23 289 89 1369 206 55 98 chr10 24261859 24262093 -121327195 + L1MC5 LINE L1 6640 6882 -1079 1426 205 74 37 chr10 24262093 24262391 -121326897 + AluJo SINE Alu 1 309 -3 1369 206 55 98 chr10 24262391 24262769 -121326519 + L1MC5 LINE L1 6882 7226 -735 234 291 78 28 chr10 24262806 24262947 -121326341 + L1MC4 LINE L1 7328 7475 -567 956 192 8 79 chr10 24263129 24263494 -121325794 - L1MC3 LINE L1 0 7785 7324 1831 172 3 0 chr10 24263494 24263784 -121325504 - AluJo SINE Alu -21 291 1 956 192 8 79 chr10 24263784 24263895 -121325393 - L1MC3 LINE L1 -461 7324 7207 282 240 0 90 chr10 24263912 24264012 -121325276 - MLT1F1 LTR MaLR -442 125 35 4364 235 63 24 chr10 24264012 24265397 -121323891 - L1MC3 LINE L1 -688 7097 5659 6307 43 4 1 chr10 24265401 24266205 -121323083 - L1PA6 LINE L1 -5 6149 5344 5492 249 54 24 chr10 24266217 24268306 -121320982 + L1ME LINE L1 3272 5418 -758 338 272 53 105 chr10 24268417 24268645 -121320643 + MIR SINE MIR 11 226 -36 277 332 14 120 chr10 24268636 24268853 -121320435 - L2 LINE L2 -114 3158 2965 * 543 351 137 25 chr10 24268943 24269576 -121319712 - L2 LINE L2 -498 2816 2113 564 149 0 0 chr10 24269618 24269705 -121319583 + FLAM_A SINE Alu 26 112 -30 437 337 116 42 chr10 24269741 24270147 -121319141 - L2 LINE L2 -1258 2056 1621 225 294 0 35 chr10 24270394 24270479 -121318809 - LTR33A LTR ERVL -144 379 298 199 245 19 0 chr10 24270582 24270635 -121318653 + L2 LINE L2 3259 3312 -1 192 173 0 77 chr10 24271811 24271863 -121317425 - MIR SINE MIR -60 148 101 327 309 46 13 chr10 24272106 24272258 -121317030 + L1ME LINE L1 5617 5773 -348 2187 118 13 0 chr10 24272459 24272763 -121316525 + AluSx SINE Alu 1 308 -4 423 132 0 0 chr10 24272767 24272835 -121316453 + (GA)n Simple_repeat Simple_repeat 2 69 0 278 59 0 0 chr10 24272835 24272869 -121316419 + (GGAAA)n Simple_repeat Simple_repeat 2 35 0 246 178 110 0 chr10 24273079 24273152 -121316136 + L1ME4a LINE L1 6029 6109 -12 2053 109 0 11 chr10 24273263 24273548 -121315740 - AluSx SINE Alu -30 282 1 28 29 0 0 chr10 24274026 24274061 -121315227 + AT_rich Low_complexity Low_complexity 1 35 0 2269 82 10 3 chr10 24274629 24274923 -121314365 - AluSg SINE Alu -14 296 1 395 271 19 19 chr10 24275233 24275340 -121313948 - L2 LINE L2 -22 3291 3185 354 316 46 40 chr10 24276536 24276710 -121312578 + MIR SINE MIR 61 235 -27 1991 81 0 0 chr10 24277339 24277616 -121311672 + AluY SINE Alu 39 315 0 517 276 99 70 chr10 24278272 24278515 -121310773 + MIR SINE MIR 13 262 0 21 0 0 0 chr10 24279057 24279078 -121310210 + AT_rich Low_complexity Low_complexity 1 21 0 315 219 55 0 chr10 24279078 24279151 -121310137 - MER3 DNA MER1_type -131 78 2 24 67 0 0 chr10 24279371 24279416 -121309872 + AT_rich Low_complexity Low_complexity 1 45 0 676 172 18 123 chr10 24279793 24279872 -121309416 - MER3 DNA MER1_type -5 204 118 749 153 0 0 chr10 24279872 24279990 -121309298 + FLAM_C SINE Alu 1 118 -15 676 172 18 123 chr10 24279990 24280137 -121309151 - MER3 DNA MER1_type -91 118 2 1996 142 3 0 chr10 24280605 24280900 -121308388 - AluJb SINE Alu -16 296 1 25 0 0 0 chr10 24280900 24280925 -121308363 + AT_rich Low_complexity Low_complexity 1 25 0 936 314 118 24 chr10 24281591 24282418 -121306870 - L2 LINE L2 0 3313 2401 695 272 44 92 chr10 24282904 24283500 -121305788 + L1ME2 LINE L1 310 876 -5520 * 1132 237 49 20 chr10 24283492 24283977 -121305311 + L1ME2 LINE L1 2096 2562 -3653 489 201 0 29 chr10 24283985 24284124 -121305164 + L1ME2 LINE L1 4457 4591 -1624 1799 210 39 58 chr10 24284132 24284187 -121305101 + L1ME2 LINE L1 5599 5653 -578 2033 147 3 0 chr10 24284187 24284479 -121304809 - AluJo SINE Alu -15 297 5 1799 210 39 58 chr10 24284479 24285075 -121304213 + L1ME2 LINE L1 5653 6214 -17 275 216 0 0 chr10 24285238 24285289 -121303999 + L2 LINE L2 3263 3313 0 478 369 66 26 chr10 24285362 24285939 -121303349 - L2 LINE L2 -1824 1490 891 1953 228 84 20 chr10 24286255 24286813 -121302475 + L1ME3 LINE L1 5462 6055 -107 320 271 134 53 chr10 24286885 24287147 -121302141 - L1MDa LINE L1 -3934 2281 2040 23 68 0 0 chr10 24287154 24287198 -121302090 + AT_rich Low_complexity Low_complexity 1 44 0 2259 100 0 3 chr10 24287348 24287647 -121301641 + AluSx SINE Alu 1 298 -14 223 229 157 0 chr10 24288249 24288319 -121300969 - MIR3 SINE MIR -3 205 125 323 295 22 79 chr10 24289412 24289551 -121299737 - MIR SINE MIR -12 250 120 993 147 84 0 chr10 24290216 24290406 -121298882 + L1MC3 LINE L1 6892 7097 -688 246 326 0 11 chr10 24290406 24290498 -121298790 + MLT1F1 LTR MaLR 35 125 -442 408 149 68 0 chr10 24290498 24290572 -121298716 + L1MC3 LINE L1 7190 7268 -517 822 154 0 23 chr10 24290577 24290707 -121298581 + AluJb SINE Alu 3 129 -183 1788 174 0 31 chr10 24290721 24291042 -121298246 + AluJb SINE Alu 1 311 -1 2107 182 88 15 chr10 24291047 24291524 -121297764 + L1MC3 LINE L1 7264 7775 -10 6354 246 59 25 chr10 24292249 24294636 -121294652 + L1MEc LINE L1 74 2380 -3835 2499 67 0 0 chr10 24294636 24294934 -121294354 - AluY SINE Alu -13 298 1 6354 246 59 25 chr10 24294934 24295546 -121293742 + L1MEc LINE L1 2380 2970 -3245 2024 132 16 3 chr10 24295546 24295849 -121293439 + AluSc SINE Alu 1 307 -2 6354 246 59 25 chr10 24295849 24296598 -121292690 + L1MEc LINE L1 2970 3941 -2274 1592 218 68 60 chr10 24296598 24297099 -121292189 + MLT1D LTR MaLR 1 505 0 6354 246 59 25 chr10 24297099 24297416 -121291872 + L1MEc LINE L1 3941 4246 -1969 326 168 253 0 chr10 24297496 24297591 -121291697 - L1ME2 LINE L1 -274 5890 5772 1580 200 53 43 chr10 24297592 24298018 -121291270 - L1ME2 LINE L1 -543 5623 5197 294 215 66 33 chr10 24298014 24298074 -121291214 - L1MC2 LINE L1 -1 6343 6286 * 1960 142 0 40 chr10 24298074 24298398 -121290890 + AluJb SINE Alu 1 311 -1 294 215 66 33 chr10 24298398 24298458 -121290830 - L1MC2 LINE L1 -58 6286 6219 2773 171 37 4 chr10 24298474 24298965 -121290323 - MLT2B2 LTR ERVL 0 515 9 480 312 139 14 chr10 24299034 24299329 -121289959 - L2 LINE L2 -15 3298 2967 1838 106 8 0 chr10 24300064 24300309 -121288979 + AluSx SINE Alu 47 293 -19 274 200 22 60 chr10 24300377 24300562 -121288726 + (TATAA)n Simple_repeat Simple_repeat 1 178 0 726 216 12 6 chr10 24301250 24301412 -121287876 - MIR SINE MIR 0 262 100 1055 151 0 35 chr10 24301597 24301769 -121287519 + AluJb SINE Alu 127 292 -20 356 170 17 2 chr10 24302337 24302406 -121286882 + MIR SINE MIR 112 181 -27 2135 115 0 7 chr10 24302417 24302721 -121286567 - AluSx SINE Alu 0 302 1 213 39 0 0 chr10 24303841 24303867 -121285421 + (CA)n Simple_repeat Simple_repeat 2 27 0 1651 169 142 17 chr10 24304388 24304803 -121284485 - MLT1C LTR MaLR 0 467 1 296 280 93 0 chr10 24306655 24306762 -121282526 - MIR SINE MIR -77 185 69 284 277 39 54 chr10 24306935 24307065 -121282223 - MIR SINE MIR -63 199 72 1155 244 29 59 chr10 24307179 24307308 -121281980 + L1M4 LINE L1 4062 4193 -1953 2420 88 0 0 chr10 24307308 24307586 -121281702 + AluSc SINE Alu 1 281 -28 288 0 0 0 chr10 24307586 24307618 -121281670 + (CA)n Simple_repeat Simple_repeat 1 32 0 2420 88 0 0 chr10 24307618 24307645 -121281643 + AluSc SINE Alu 280 306 -3 1155 244 29 59 chr10 24307645 24307957 -121281331 + L1M4 LINE L1 4193 4490 -1656 1430 271 137 51 chr10 24308037 24308135 -121281153 - L1ME LINE L1 -4141 2120 2032 2144 117 3 7 chr10 24308135 24308435 -121280853 - AluSx SINE Alu -13 299 1 1430 271 137 51 chr10 24308435 24309899 -121279389 - L1ME LINE L1 -4229 2032 428 439 223 11 0 chr10 24310121 24310215 -121279073 - L1ME LINE L1 -5606 464 370 250 204 0 0 chr10 24310227 24310271 -121279017 - MLT2D LTR ERVL -8 445 402 1845 124 55 66 chr10 24310295 24310674 -121278614 - THE1C LTR MaLR 0 375 1 1722 191 29 3 chr10 24310710 24311024 -121278264 - MLT2D LTR ERVL -62 352 31 800 214 73 0 chr10 24311033 24311211 -121278077 - ERVL-D LTR ERVL 0 5764 5574 * 1689 108 60 4 chr10 24311208 24311459 -121277829 - ERVL-D LTR ERVL -975 4789 4525 1738 156 45 7 chr10 24312194 24312483 -121276805 - AluJb SINE Alu -12 300 1 501 341 72 43 chr10 24313956 24314542 -121274746 - L2 LINE L2 -337 2977 2375 4715 178 35 11 chr10 24314573 24315129 -121274159 - L1MB3 LINE L1 -1 6182 5641 2203 119 7 0 chr10 24315129 24315432 -121273856 - AluSx SINE Alu -4 308 4 4715 178 35 11 chr10 24315432 24316125 -121273163 - L1MB3 LINE L1 -542 5641 4903 202 343 14 14 chr10 24316130 24316203 -121273085 + MIR3 SINE MIR 130 202 -6 1707 160 0 18 chr10 24316706 24316988 -121272300 + AluJo SINE Alu 1 277 -35 378 0 0 0 chr10 24316988 24317030 -121272258 + (TAA)n Simple_repeat Simple_repeat 1 42 0 2375 94 0 0 chr10 24317444 24317752 -121271536 - AluY SINE Alu -3 308 1 462 291 39 22 chr10 24317878 24318060 -121271228 - LTR33 LTR ERVL -2 519 335 2030 131 3 0 chr10 24318323 24318637 -121270651 - AluSx SINE Alu 0 315 1 419 347 107 44 chr10 24318667 24318974 -121270314 - HAL1b LINE L1 -577 771 485 2061 117 0 32 chr10 24318974 24319283 -121270005 + AluSq SINE Alu 4 302 -11 419 347 107 44 chr10 24319283 24319592 -121269696 - HAL1b LINE L1 -863 485 116 336 349 102 29 chr10 24319892 24320443 -121268845 + L2 LINE L2 1706 2296 -1018 2027 147 44 6 chr10 24321880 24322241 -121267047 - THE1C LTR MaLR 0 375 1 22 0 0 0 chr10 24323147 24323169 -121266119 + AT_rich Low_complexity Low_complexity 1 22 0 31 0 0 0 chr10 24324432 24324463 -121264825 + AT_rich Low_complexity Low_complexity 1 31 0 191 315 81 36 chr10 24324624 24324735 -121264553 + L3 LINE CR1 1060 1175 -402 1921 114 0 11 chr10 24325800 24326072 -121263216 + AluSx SINE Alu 10 278 -34 189 0 0 0 chr10 24326075 24326096 -121263192 + (CAAA)n Simple_repeat Simple_repeat 1 21 0 2404 88 0 0 chr10 24326753 24327060 -121262228 - AluY SINE Alu -4 307 1 442 297 39 22 chr10 24327186 24327368 -121261920 - LTR33 LTR ERVL -2 519 335 2030 131 3 0 chr10 24327631 24327945 -121261343 - AluSx SINE Alu 0 315 1 419 347 107 44 chr10 24327975 24328282 -121261006 - HAL1b LINE L1 -577 771 485 1992 119 0 35 chr10 24328282 24328592 -121260696 + AluSq SINE Alu 4 302 -11 419 347 107 44 chr10 24328592 24328901 -121260387 - HAL1b LINE L1 -863 485 116 336 349 102 29 chr10 24329201 24329752 -121259536 + L2 LINE L2 1706 2296 -1018 2027 147 44 6 chr10 24331189 24331550 -121257738 - THE1C LTR MaLR 0 375 1 22 0 0 0 chr10 24332457 24332479 -121256809 + AT_rich Low_complexity Low_complexity 1 22 0 31 0 0 0 chr10 24333743 24333774 -121255514 + AT_rich Low_complexity Low_complexity 1 31 0 191 315 81 36 chr10 24333935 24334046 -121255242 + L3 LINE CR1 1060 1175 -402 1882 114 0 15 chr10 24335111 24335384 -121253904 + AluSx SINE Alu 10 278 -34 189 0 0 0 chr10 24335387 24335408 -121253880 + (CAAA)n Simple_repeat Simple_repeat 1 21 0 329 308 8 17 chr10 24335529 24335646 -121253642 - MIR SINE MIR -127 135 20 27 87 0 0 chr10 24337468 24337537 -121251751 + AT_rich Low_complexity Low_complexity 1 69 0 1727 156 0 63 chr10 24337890 24338192 -121251096 - AluJo SINE Alu -21 291 9 388 275 34 143 chr10 24338829 24339243 -121250045 + L2 LINE L2 2921 3289 -24 2099 128 0 13 chr10 24339281 24339641 -121249647 + AluSx SINE Alu 1 312 0 414 261 79 36 chr10 24343518 24343683 -121245605 - MIR SINE MIR -15 247 76 184 200 31 0 chr10 24343975 24344040 -121245248 + CT-rich Low_complexity Low_complexity 2 68 0 197 87 0 65 chr10 24344445 24344491 -121244797 + (T)n Simple_repeat Simple_repeat 1 43 0 301 318 94 60 chr10 24344507 24344774 -121244514 - L2 LINE L2 -21 3292 3017 228 326 14 56 chr10 24346717 24346861 -121242427 - L2 LINE L2 -208 3064 2927 202 288 65 39 chr10 24347151 24347423 -121241865 - L2 LINE L2 -212 3060 2776 863 154 0 15 chr10 24347428 24347564 -121241724 + AluJo SINE Alu 1 134 -178 447 309 134 4 chr10 24347596 24347842 -121241446 - L2 LINE L2 -541 2773 2496 21 57 0 0 chr10 24349134 24349169 -121240119 + AT_rich Low_complexity Low_complexity 1 35 0 433 113 0 0 chr10 24350293 24350364 -121238924 + 5S rRNA rRNA 42 112 -9 23 0 0 0 chr10 24350827 24350850 -121238438 + AT_rich Low_complexity Low_complexity 1 23 0 666 252 102 39 chr10 24351590 24351923 -121237365 + L1ME3A LINE L1 5609 5962 -208 762 144 0 8 chr10 24352278 24352403 -121236885 + FLAM_C SINE Alu 1 124 -19 661 197 167 31 chr10 24352546 24352791 -121236497 - MIR SINE MIR 0 262 3 224 391 76 0 chr10 24352901 24352993 -121236295 - L2 LINE L2 -19 3253 3155 437 356 98 32 chr10 24353278 24353593 -121235695 + L2 LINE L2 2937 3272 0 1034 194 246 6 chr10 24354203 24354544 -121234744 - MLT1D LTR MaLR 0 505 83 353 22 22 0 chr10 24355552 24355598 -121233690 + (TTTC)n Simple_repeat Simple_repeat 2 48 0 1786 151 95 0 chr10 24355601 24355886 -121233402 - AluSx SINE Alu 0 312 1 928 170 23 47 chr10 24356694 24356865 -121232423 + FAM SINE Alu 4 170 -5 1525 147 12 16 chr10 24356892 24357137 -121232151 + AluJo SINE Alu 15 258 -54 2488 50 13 0 chr10 24357947 24358246 -121231042 + AluY SINE Alu 1 303 -8 584 265 59 116 chr10 24358423 24358595 -121230693 - L2 LINE L2 -4 3309 3129 2275 111 3 0 chr10 24358595 24358901 -121230387 + AluSx SINE Alu 1 307 -5 584 265 59 116 chr10 24358901 24359370 -121229918 - L2 LINE L2 -184 3129 2685 211 264 0 57 chr10 24359429 24359482 -121229806 - L3b LINE CR1 -21 1562 1513 2257 65 34 14 chr10 24360438 24360730 -121228558 + AluSc SINE Alu 1 298 -11 2084 142 0 0 chr10 24360842 24361137 -121228151 + AluJb SINE Alu 9 303 -9 24 32 0 0 chr10 24361243 24361274 -121228014 + AT_rich Low_complexity Low_complexity 1 31 0 2118 101 0 24 chr10 24362499 24362809 -121226479 - AluSg SINE Alu 0 303 1 767 153 6 17 chr10 24363140 24363317 -121225971 + CT-rich Low_complexity Low_complexity 3 177 0 758 196 0 6 chr10 24363361 24363529 -121225759 + CT-rich Low_complexity Low_complexity 1 167 0 798 217 0 10 chr10 24363568 24364070 -121225218 + CT-rich Low_complexity Low_complexity 1 496 0 252 279 36 72 chr10 24364125 24364236 -121225052 + L2 LINE L2 3182 3288 -25 736 292 5 0 chr10 24364299 24364484 -121224804 + MIR SINE MIR 71 256 -6 278 312 78 81 chr10 24365451 24365904 -121223384 + L2 LINE L2 2246 2698 -616 2030 133 3 32 chr10 24365904 24366213 -121223075 - AluSx SINE Alu -12 300 1 278 312 78 81 chr10 24366213 24366314 -121222974 + L2 LINE L2 2698 2798 -516 1150 146 34 75 chr10 24366472 24366767 -121222521 - L1MA9 LINE L1 0 6312 6030 341 333 37 30 chr10 24366812 24366947 -121222341 + L2 LINE L2 3127 3262 -10 23 33 0 0 chr10 24366947 24366977 -121222311 + AT_rich Low_complexity Low_complexity 1 30 0 235 309 98 16 chr10 24367210 24367333 -121221955 + MIR SINE MIR 113 245 -17 3260 63 4 35 chr10 24367538 24367998 -121221290 + L1PA13 LINE L1 5716 6161 -2 750 158 72 0 chr10 24368871 24369010 -121220278 - L2 LINE L2 0 3313 3165 21 0 0 0 chr10 24370083 24370104 -121219184 + AT_rich Low_complexity Low_complexity 1 21 0 2081 130 0 3 chr10 24370497 24370808 -121218480 + AluSx SINE Alu 1 310 0 2419 86 0 0 chr10 24371529 24371831 -121217457 - AluY SINE Alu -9 302 1 3018 199 76 17 chr10 24372413 24372545 -121216743 - L1ME1 LINE L1 -50 6116 5993 1643 150 49 59 chr10 24372545 24372852 -121216436 - AluJb SINE Alu 0 312 9 3018 199 76 17 chr10 24372852 24373130 -121216158 - L1ME1 LINE L1 -173 5993 5733 2011 110 7 28 chr10 24373130 24373450 -121215838 - AluSx SINE Alu 0 314 1 3018 199 76 17 chr10 24373450 24373812 -121215476 - L1ME1 LINE L1 -433 5733 5296 * 5518 120 7 23 chr10 24373808 24374836 -121214452 - L1PA16 LINE L1 0 6166 5157 818 250 18 0 chr10 24374829 24375057 -121214231 - L1ME1 LINE L1 -836 5310 5079 * 790 239 17 4 chr10 24375127 24375357 -121213931 - L1ME1 LINE L1 -1066 5080 4848 4820 236 42 40 chr10 24375372 24377409 -121211879 + L1MDb LINE L1 23 2054 -4352 366 23 0 0 chr10 24377409 24377452 -121211836 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 4820 236 42 40 chr10 24377452 24379687 -121209601 + L1MDb LINE L1 2054 4318 -2088 644 198 120 0 chr10 24379685 24379852 -121209436 - L1MD2 LINE L1 -130 6229 6043 * 2170 227 26 41 chr10 24379855 24380587 -121208701 - L1M4 LINE L1 -1216 4930 4210 1265 199 99 95 chr10 24380586 24380874 -121208414 - L1MDb LINE L1 -4820 1260 975 * 1719 171 3 10 chr10 24380874 24381172 -121208116 + AluJo SINE Alu 3 298 -14 1265 199 99 95 chr10 24381172 24381719 -121207569 - L1MDb LINE L1 -5105 975 456 319 289 142 64 chr10 24381752 24381970 -121207318 - L1MDb LINE L1 -5564 506 272 284 288 32 32 chr10 24382353 24382478 -121206810 - L1MDb LINE L1 -5935 135 11 808 193 57 124 chr10 24382480 24382916 -121206372 - LTR37B LTR ERV1 -57 396 6 256 200 0 55 chr10 24383016 24383071 -121206217 - L2 LINE L2 -8 3305 3254 840 249 6 6 chr10 24383226 24383403 -121205885 + MER8 DNA MER2_type 1 177 -62 238 172 121 17 chr10 24383381 24383439 -121205849 + MER2 DNA MER2_type 282 345 0 * 410 165 0 25 chr10 24383439 24383511 -121205777 - Tigger2 DNA MER2_type -2648 70 1 210 264 19 0 chr10 24383606 24383659 -121205629 + GA-rich Low_complexity Low_complexity 2 55 0 700 186 0 8 chr10 24384983 24385101 -121204187 + FLAM_C SINE Alu 1 117 -16 22 35 0 0 chr10 24385102 24385131 -121204157 + AT_rich Low_complexity Low_complexity 1 29 0 35 24 0 0 chr10 24385359 24385401 -121203887 + AT_rich Low_complexity Low_complexity 1 42 0 225 261 0 0 chr10 24386153 24386241 -121203047 + (TA)n Simple_repeat Simple_repeat 1 88 0 246 311 100 54 chr10 24386275 24386800 -121202488 - L2 LINE L2 -4 3268 2612 192 275 53 61 chr10 24386830 24386961 -121202327 - L2 LINE L2 -822 2492 2363 184 254 0 55 chr10 24386978 24387033 -121202255 + L2 LINE L2 3221 3272 0 270 278 124 10 chr10 24387455 24387552 -121201736 - MIR SINE MIR -61 147 40 371 334 43 34 chr10 24387763 24387995 -121201293 + L2 LINE L2 2092 2329 -985 2088 141 7 82 chr10 24387995 24388399 -121200889 - MLT1A2 LTR MaLR 0 374 1 371 334 43 34 chr10 24388399 24388431 -121200857 + L2 LINE L2 2329 2359 -955 209 338 0 0 chr10 24388892 24388960 -121200328 + L2 LINE L2 1371 1438 -1876 377 264 139 21 chr10 24388990 24389134 -121200154 + MIR SINE MIR 18 178 -84 22 0 0 0 chr10 24389183 24389205 -121200083 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr10 24389379 24389400 -121199888 + AT_rich Low_complexity Low_complexity 1 21 0 445 320 64 25 chr10 24389482 24389685 -121199603 - MIR SINE MIR -41 221 11 27 62 0 0 chr10 24391189 24391237 -121198051 + AT_rich Low_complexity Low_complexity 1 48 0 21 95 0 0 chr10 24391472 24391535 -121197753 + AT_rich Low_complexity Low_complexity 1 63 0 501 265 124 50 chr10 24392302 24392844 -121196444 + L1M4 LINE L1 4352 4927 -1219 351 252 78 13 chr10 24393112 24393237 -121196051 - MLT1J1 LTR MaLR -39 370 232 680 152 19 9 chr10 24393819 24393924 -121195364 - AluJb SINE Alu -24 288 183 268 81 0 0 chr10 24393925 24393962 -121195326 + MADE1 DNA Mariner 15 51 -29 2369 101 0 0 chr10 24394099 24394407 -121194881 - AluSx SINE Alu -4 308 1 422 267 37 7 chr10 24394944 24395079 -121194209 + MIR SINE MIR 19 157 -105 * 775 259 103 13 chr10 24395069 24395301 -121193987 - MIR SINE MIR 0 262 10 199 294 0 0 chr10 24395295 24395346 -121193942 + MIR SINE MIR 156 206 -56 * 345 82 0 0 chr10 24395373 24395422 -121193866 + (TG)n Simple_repeat Simple_repeat 2 50 0 637 217 82 9 chr10 24395520 24395700 -121193588 - MER58B DNA MER1_type -19 322 1 2101 185 89 9 chr10 24395958 24396244 -121193044 - LTR40b LTR ERVL 0 462 129 2286 99 10 0 chr10 24396244 24396537 -121192751 + AluSp SINE Alu 1 296 -17 2101 185 89 9 chr10 24396537 24396678 -121192610 - LTR40b LTR ERVL -333 129 1 209 218 51 0 chr10 24396774 24396852 -121192436 + (TA)n Simple_repeat Simple_repeat 1 82 0 572 248 130 39 chr10 24397166 24397363 -121191925 + MIR SINE MIR 11 233 -29 1951 184 82 10 chr10 24397363 24397764 -121191524 - MER95 LTR ERV -1 430 1 572 248 130 39 chr10 24397764 24397796 -121191492 + MIR SINE MIR 233 261 -1 2102 124 3 3 chr10 24398078 24398376 -121190912 - AluSx SINE Alu -13 299 2 2134 130 0 0 chr10 24398617 24398917 -121190371 - AluSx SINE Alu -12 300 1 320 209 204 57 chr10 24400603 24400831 -121188457 - MER34C LTR ERV1 -21 739 385 259 216 20 0 chr10 24400999 24401050 -121188238 - MER34 LTR ERV1 -467 75 24 402 21 0 0 chr10 24401187 24401234 -121188054 + (TA)n Simple_repeat Simple_repeat 2 48 0 1496 183 10 29 chr10 24401241 24401547 -121187741 + AluJo SINE Alu 1 300 -12 2240 113 3 3 chr10 24401582 24401892 -121187396 + AluSq SINE Alu 1 310 -3 587 307 58 0 chr10 24402437 24402626 -121186662 + MIR SINE MIR 52 251 -11 732 223 84 37 chr10 24402860 24403192 -121186096 + LTR35 LTR ERV1 350 618 0 1075 206 30 11 chr10 24403222 24403489 -121185799 + L1MA4 LINE L1 6029 6300 0 4592 143 45 35 chr10 24403615 24403898 -121185390 + LTR39 LTR ERV1 1 280 -503 2051 96 0 53 chr10 24403898 24404226 -121185062 + AluSx SINE Alu 1 312 0 4592 143 45 35 chr10 24404226 24404716 -121184572 + LTR39 LTR ERV1 280 783 0 909 247 58 55 chr10 24404801 24404951 -121184337 + MER39 LTR ERV1 1 149 -393 4137 156 11 0 chr10 24404951 24405579 -121183709 + MER41B LTR ERV1 1 635 0 909 247 58 55 chr10 24405579 24405933 -121183355 + MER39 LTR ERV1 149 539 -3 327 174 101 64 chr10 24407462 24407571 -121181717 - L1ME4a LINE L1 -19 6102 5990 4621 81 0 0 chr10 24407623 24408177 -121181111 - MER41A LTR ERV1 0 554 1 246 32 0 0 chr10 24408867 24408898 -121180390 + (T)n Simple_repeat Simple_repeat 1 31 0 974 210 49 38 chr10 24409439 24409706 -121179582 - MER39 LTR ERV1 0 707 438 1519 121 58 4 chr10 24409708 24409948 -121179340 - LTR45 LTR ERV1 0 525 273 2099 166 44 30 chr10 24409948 24410494 -121178794 - MLT2A2 LTR ERVL 0 554 1 1415 121 86 93 chr10 24410494 24410773 -121178515 - LTR45 LTR ERV1 -248 277 1 260 279 133 62 chr10 24410773 24410985 -121178303 - MER34 LTR ERV1 -268 439 2 22 80 0 0 chr10 24411734 24411784 -121177504 + AT_rich Low_complexity Low_complexity 1 50 0 475 254 52 46 chr10 24412587 24412760 -121176528 - MIR3 SINE MIR -1 207 34 2929 201 16 67 chr10 24412827 24413081 -121176207 + LTR8 LTR ERV1 16 282 -409 2689 139 55 0 chr10 24413081 24413485 -121175803 - MSTB LTR MaLR 0 426 1 2929 201 16 67 chr10 24413485 24413927 -121175361 + LTR8 LTR ERV1 282 676 -15 217 288 80 56 chr10 24414126 24414251 -121175037 + MIR3 SINE MIR 31 158 -50 201 323 63 47 chr10 24414288 24414415 -121174873 - MIR3 SINE MIR -76 132 4 1094 215 81 63 chr10 24414586 24415052 -121174236 - MER39 LTR ERV1 0 707 42 2284 109 3 3 chr10 24415052 24415364 -121173924 + AluSx SINE Alu 1 312 0 257 246 0 0 chr10 24415377 24415434 -121173854 - MER34 LTR ERV1 -485 57 1 1461 168 0 93 chr10 24415486 24415659 -121173629 - AluJo SINE Alu -21 291 160 2225 115 0 31 chr10 24415659 24415981 -121173307 - AluSx SINE Alu 0 312 1 1461 168 0 93 chr10 24415981 24416128 -121173160 - AluJo SINE Alu -152 160 1 225 256 0 0 chr10 24416974 24417017 -121172271 + L2 LINE L2 3255 3297 -16 1860 113 6 77 chr10 24417898 24418209 -121171079 - AluSx SINE Alu -23 289 1 234 231 111 19 chr10 24419336 24419444 -121169844 + L1ME4a LINE L1 5984 6101 -20 2318 99 0 0 chr10 24419498 24419802 -121169486 - AluSg SINE Alu -6 304 1 785 182 56 10 chr10 24419809 24420007 -121169281 + Charlie1 DNA MER1_type 2550 2756 -5 216 274 0 20 chr10 24420028 24420079 -121169209 + MIR SINE MIR 30 79 -129 440 313 171 9 chr10 24420102 24420313 -121168975 + MIR SINE MIR 18 262 0 1864 153 0 19 chr10 24420398 24420705 -121168583 - AluJb SINE Alu -11 301 1 235 247 21 46 chr10 24421082 24421209 -121168079 + CT-rich Low_complexity Low_complexity 1 123 0 1693 159 0 48 chr10 24421808 24422103 -121167185 + AluJo SINE Alu 11 291 -21 809 92 0 0 chr10 24423108 24423206 -121166082 - AluSg/x SINE Alu -21 291 194 976 166 6 0 chr10 24423232 24423389 -121165899 + AluSx SINE Alu 1 158 -154 1318 129 15 5 chr10 24423490 24423716 -121165572 + AluY SINE Alu 80 307 0 1653 179 32 0 chr10 24423776 24424084 -121165204 + MER33 DNA MER1_type 3 320 -4 1744 172 69 0 chr10 24424370 24424661 -121164627 + AluJo SINE Alu 1 311 -1 1410 163 61 30 chr10 24425440 24425704 -121163584 - AluJo SINE Alu -5 307 36 2073 231 4 41 chr10 24426352 24426842 -121162446 + MLT2B1 LTR ERVL 7 478 -42 208 135 0 0 chr10 24427888 24427925 -121161363 + (A)n Simple_repeat Simple_repeat 1 37 0 565 308 97 0 chr10 24428066 24428303 -121160985 + MIR SINE MIR 3 262 0 677 295 48 22 chr10 24428498 24428725 -121160563 + MIR SINE MIR 23 255 -7 26932 36 1 1 chr10 24429761 24433774 -121155514 - L1PA4 LINE L1 0 7574 3555 2036 156 0 0 chr10 24433906 24434214 -121155074 - AluSx SINE Alu -4 308 1 1361 203 13 41 chr10 24434217 24434532 -121154756 - AluJo SINE Alu -2 310 5 1585 208 10 14 chr10 24434898 24435192 -121154096 + AluJo SINE Alu 4 296 -6 1966 135 42 0 chr10 24435403 24435692 -121153596 - AluSx SINE Alu -11 301 1 292 335 85 13 chr10 24436200 24436395 -121152893 + L3b LINE CR1 1033 1243 -340 234 128 0 0 chr10 24436419 24436458 -121152830 + (TATG)n Simple_repeat Simple_repeat 4 42 0 4213 165 23 1 chr10 24436757 24437440 -121151848 + MER44D DNA MER2_type 6 703 -2 779 316 98 67 chr10 24437519 24438412 -121150876 + L2 LINE L2 290 1224 -2090 2236 109 0 10 chr10 24438412 24438714 -121150574 + AluSx SINE Alu 1 299 -13 779 316 98 67 chr10 24438714 24438924 -121150364 + L2 LINE L2 1224 1426 -1888 759 325 59 28 chr10 24439117 24439662 -121149626 + L2 LINE L2 2226 2787 -527 3020 118 41 51 chr10 24439806 24440116 -121149172 - LTR45B LTR ERV1 0 489 184 1830 104 112 0 chr10 24440116 24440376 -121148912 - AluSg SINE Alu -19 291 3 3020 118 41 51 chr10 24440376 24440555 -121148733 - LTR45B LTR ERV1 -305 184 5 381 333 13 31 chr10 24440612 24440771 -121148517 + L2 LINE L2 3117 3272 0 2082 112 14 10 chr10 24440886 24441180 -121148108 + AluSx SINE Alu 1 295 -17 197 33 33 0 chr10 24443269 24443299 -121145989 + (TA)n Simple_repeat Simple_repeat 1 31 0 2169 118 0 0 chr10 24443299 24443586 -121145702 - AluSx SINE Alu -25 287 1 2139 108 105 31 chr10 24443656 24444007 -121145281 + MER51B LTR ERV1 1 377 0 1830 148 25 3 chr10 24444365 24444649 -121144639 + AluJo SINE Alu 5 294 -18 180 0 0 0 chr10 24444733 24444753 -121144535 + (T)n Simple_repeat Simple_repeat 1 20 0 231 133 0 0 chr10 24445333 24445378 -121143910 + (TTCA)n Simple_repeat Simple_repeat 4 48 0 189 0 0 0 chr10 24445777 24445798 -121143490 + (TTCA)n Simple_repeat Simple_repeat 1 21 0 733 264 102 86 chr10 24446270 24446690 -121142598 + LTR16A LTR ERVL 24 450 0 21 0 0 0 chr10 24446755 24446776 -121142512 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 24446958 24446979 -121142309 + AT_rich Low_complexity Low_complexity 1 21 0 452 258 126 26 chr10 24447370 24447641 -121141647 + L1ME4a LINE L1 5711 6008 -113 22 0 0 0 chr10 24447687 24447709 -121141579 + AT_rich Low_complexity Low_complexity 1 22 0 1107 141 0 0 chr10 24447763 24447926 -121141362 - AluSg/x SINE Alu -7 303 141 312 162 0 0 chr10 24447926 24447976 -121141312 - AluSp SINE Alu -129 174 133 2221 95 3 7 chr10 24448255 24448549 -121140739 + AluSg SINE Alu 1 293 -17 25 75 0 0 chr10 24448734 24448787 -121140501 + AT_rich Low_complexity Low_complexity 1 53 0 464 328 33 0 chr10 24449286 24449466 -121139822 + MER5A DNA MER1_type 4 189 0 1584 122 48 71 chr10 24449943 24450238 -121139050 + AluJb SINE Alu 4 291 -21 326 296 80 59 chr10 24450608 24450895 -121138393 + L2 LINE L2 2991 3283 -30 2272 114 0 19 chr10 24450907 24451223 -121138065 - AluSx SINE Alu -2 310 1 297 265 15 0 chr10 24452032 24452100 -121137188 - L2 LINE L2 0 3313 3245 1803 146 36 4 chr10 24452631 24452905 -121136383 + AluSx SINE Alu 4 286 -26 2293 45 69 3 chr10 24453103 24453393 -121135895 - AluY SINE Alu -2 309 1 271 221 73 0 chr10 24453988 24454056 -121135232 - L2 LINE L2 0 3272 3200 2176 111 6 16 chr10 24454218 24454533 -121134755 - AluSx SINE Alu 0 312 1 202 233 100 33 chr10 24455454 24455514 -121133774 + L2 LINE L2 3201 3264 -8 2390 81 10 0 chr10 24455759 24456055 -121133233 + AluY SINE Alu 1 299 -12 270 0 0 0 chr10 24456058 24456088 -121133200 + (TA)n Simple_repeat Simple_repeat 1 30 0 * 369 0 0 0 chr10 24456087 24456128 -121133160 + (GA)n Simple_repeat Simple_repeat 2 42 0 841 176 0 0 chr10 24456208 24456339 -121132949 - FLAM_C SINE Alu -2 131 1 186 103 0 0 chr10 24457124 24457153 -121132135 + (A)n Simple_repeat Simple_repeat 1 29 0 945 121 8 0 chr10 24458269 24458401 -121130887 + AluSq/x SINE Alu 1 133 -179 28 0 0 0 chr10 24458401 24458429 -121130859 + AT_rich Low_complexity Low_complexity 1 28 0 1938 134 3 74 chr10 24458934 24459270 -121130018 + AluSx SINE Alu 1 312 0 230 250 0 18 chr10 24459918 24459974 -121129314 + L2 LINE L2 3251 3305 -8 242 327 37 28 chr10 24460319 24460426 -121128862 + MIR SINE MIR 2 109 -153 365 146 0 0 chr10 24460437 24460492 -121128796 + MER61A LTR ERV1 7 61 -282 1612 182 32 47 chr10 24460502 24460904 -121128384 + MER61-int LTR ERV1 1 396 -4821 2490 70 0 10 chr10 24460904 24461218 -121128070 + AluY SINE Alu 1 311 0 363 162 56 100 chr10 24461285 24461465 -121127823 - MER61-int LTR ERV1 -4517 700 448 2227 92 23 0 chr10 24461469 24461772 -121127516 + AluSx SINE Alu 1 310 -2 406 81 32 0 chr10 24461916 24461978 -121127310 + Alu SINE Alu 240 303 -8 738 210 74 6 chr10 24462571 24462747 -121126541 - MER5A DNA MER1_type 0 189 2 2140 132 0 16 chr10 24462792 24463096 -121126192 - AluJo SINE Alu -13 299 1 2771 10 0 10 chr10 24463266 24463574 -121125714 - AluYb8 SINE Alu -13 305 1 2344 108 0 0 chr10 24463888 24464195 -121125093 + AluSq SINE Alu 1 307 -6 1598 175 7 0 chr10 24464570 24464855 -121124433 + AluJo SINE Alu 12 298 -14 1939 162 0 13 chr10 24465354 24465668 -121123620 + AluJb SINE Alu 3 312 0 2049 123 3 3 chr10 24465810 24466102 -121123186 - AluJo SINE Alu 0 312 21 339 370 50 6 chr10 24466971 24467152 -121122136 + MIR3 SINE MIR 4 192 -16 2228 94 0 0 chr10 24467589 24467876 -121121412 + AluSx SINE Alu 1 287 -25 2988 260 85 63 chr10 24468214 24470020 -121119268 + L1ME2 LINE L1 36 1880 -4516 897 118 0 22 chr10 24470031 24470166 -121119122 + FLAM_C SINE Alu 11 142 -1 704 199 114 57 chr10 24470166 24470261 -121119027 + L1ME2 LINE L1 1868 1956 -4440 1649 181 87 16 chr10 24470261 24470582 -121118706 + MER2 DNA MER2_type 1 344 0 704 199 114 57 chr10 24470582 24470818 -121118470 + L1ME2 LINE L1 1956 2218 -4178 368 309 0 34 chr10 24471328 24471477 -121117811 - L2 LINE L2 -2657 657 514 230 285 77 69 chr10 24471866 24471996 -121117292 + MIR SINE MIR 41 171 -91 23 78 0 0 chr10 24472127 24472178 -121117110 + AT_rich Low_complexity Low_complexity 1 51 0 1717 173 4 4 chr10 24473624 24473902 -121115386 + AluJo SINE Alu 1 278 -34 23 33 0 0 chr10 24474490 24474520 -121114768 + AT_rich Low_complexity Low_complexity 1 30 0 252 0 0 0 chr10 24474604 24474632 -121114656 + (CA)n Simple_repeat Simple_repeat 2 29 0 1565 272 118 57 chr10 24474704 24475338 -121113950 + L1ME2 LINE L1 3732 4326 -1889 2340 151 0 6 chr10 24475338 24475688 -121113600 + MER7A DNA MER2_type 1 346 0 1565 272 118 57 chr10 24475688 24476130 -121113158 + L1ME2 LINE L1 4326 4906 -1309 3741 138 41 35 chr10 24476130 24476791 -121112497 + L1MA7 LINE L1 5619 6283 -8 1565 272 118 57 chr10 24476791 24477032 -121112256 + L1ME2 LINE L1 4906 5131 -1084 1003 318 79 14 chr10 24477230 24477814 -121111474 + L1ME2 LINE L1 5196 5838 -395 2064 134 178 8 chr10 24477814 24478180 -121111108 - MSTA LTR MaLR 0 428 1 1003 318 79 14 chr10 24478180 24478364 -121110924 + L1ME2 LINE L1 5838 6009 -224 2197 135 3 0 chr10 24478683 24478994 -121110294 + AluJb SINE Alu 1 312 0 258 284 86 37 chr10 24479052 24479214 -121110074 - MLT1K LTR MaLR -21 567 398 240 315 79 79 chr10 24479326 24479497 -121109791 - MLT1K LTR MaLR -285 303 130 1232 122 16 126 chr10 24479497 24479743 -121109545 + MER20 DNA MER1_type 1 219 0 240 315 79 79 chr10 24479743 24479838 -121109450 - MLT1K LTR MaLR -457 131 37 543 296 119 44 chr10 24480123 24480670 -121108618 - L1ME4a LINE L1 -214 5907 5320 261 57 0 0 chr10 24480968 24481003 -121108285 + (TG)n Simple_repeat Simple_repeat 1 35 0 2592 184 114 73 chr10 24481020 24481747 -121107541 - LTR48 LTR ERV1 -30 757 1 224 310 64 89 chr10 24482228 24482431 -121106857 - MIR3 SINE MIR -3 205 8 886 316 43 39 chr10 24482845 24483333 -121105955 - MLT1J LTR MaLR -20 491 2 296 323 175 31 chr10 24483667 24483896 -121105392 - MIR SINE MIR 0 262 1 275 281 0 0 chr10 24484000 24484064 -121105224 + MIR SINE MIR 64 127 -81 6173 217 71 20 chr10 24484071 24485284 -121104004 + L1ME1 LINE L1 3648 4798 -1368 2169 94 14 0 chr10 24485284 24485560 -121103728 + AluSx SINE Alu 1 280 -32 225 0 0 0 chr10 24485560 24485585 -121103703 + (CAAT)n Simple_repeat Simple_repeat 4 28 0 6173 217 71 20 chr10 24485585 24485622 -121103666 + L1ME1 LINE L1 4798 4832 -1334 191 0 0 94 chr10 24485622 24485654 -121103634 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 6173 217 71 20 chr10 24485654 24486665 -121102623 + L1ME1 LINE L1 4832 6025 -141 329 204 0 31 chr10 24486720 24486818 -121102470 + G-rich Low_complexity Low_complexity 5 99 0 199 157 39 0 chr10 24486871 24486922 -121102366 + GA-rich Low_complexity Low_complexity 1 53 0 25 31 0 0 chr10 24487140 24487172 -121102116 + GC_rich Low_complexity Low_complexity 1 32 0 192 149 0 0 chr10 24487786 24487833 -121101455 + (TG)n Simple_repeat Simple_repeat 2 48 0 260 230 81 27 chr10 24488233 24488307 -121100981 - L2 LINE L2 -17 3255 3178 347 270 76 38 chr10 24488490 24488675 -121100613 + L1ME LINE L1 5632 5823 -298 1218 204 124 13 chr10 24488760 24489059 -121100229 - MLT1A2 LTR MaLR -7 367 36 286 271 100 59 chr10 24489108 24489278 -121100010 + MIR SINE MIR 86 262 0 1881 178 54 47 chr10 24490275 24490662 -121098626 - MLT1B LTR MaLR 0 390 1 1018 204 0 0 chr10 24491036 24491198 -121098090 + FAM SINE Alu 5 166 -9 2390 108 136 36 chr10 24491879 24492268 -121097020 - MSTA LTR MaLR 0 428 1 252 0 0 0 chr10 24492447 24492475 -121096813 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 4632 73 10 13 chr10 24492476 24493079 -121096209 - L1PB1 LINE L1 -7 6144 5544 817 184 20 14 chr10 24493273 24493566 -121095722 - L1MD3 LINE L1 0 7995 7529 1331 238 269 20 chr10 24493648 24494283 -121095005 - L1MC4 LINE L1 -132 7910 7118 266 267 95 9 chr10 24494763 24494868 -121094420 + MIR3 SINE MIR 86 199 -9 575 291 147 17 chr10 24495946 24496293 -121092995 + L2 LINE L2 2566 2957 -357 239 195 24 85 chr10 24496444 24496526 -121092762 + L2 LINE L2 3235 3311 -2 318 26 0 0 chr10 24496664 24496703 -121092585 + (TG)n Simple_repeat Simple_repeat 2 40 0 832 193 9 57 chr10 24496704 24497022 -121092266 - L1MA4A LINE L1 -29 6274 5911 977 274 82 16 chr10 24497987 24498366 -121090922 + LTR33 LTR ERVL 102 505 -16 266 343 75 49 chr10 24498387 24498839 -121090449 + L2 LINE L2 2412 2875 -439 234 313 68 41 chr10 24499092 24499239 -121090049 + L2 LINE L2 3080 3230 -42 2340 87 13 3 chr10 24499418 24499717 -121089571 - AluSq SINE Alu -11 302 1 2337 103 0 0 chr10 24499935 24500235 -121089053 - AluSx SINE Alu -12 300 1 2157 111 31 0 chr10 24500727 24501016 -121088272 + AluSx SINE Alu 1 298 -14 721 217 70 0 chr10 24503118 24503275 -121086013 + MER3 DNA MER1_type 2 122 -87 335 100 0 73 chr10 24503275 24503385 -121085903 + (TTTAA)n Simple_repeat Simple_repeat 3 104 0 381 177 0 25 chr10 24503392 24503471 -121085817 + MER3 DNA MER1_type 131 207 -2 837 165 71 39 chr10 24503816 24503998 -121085290 + MIR SINE MIR 41 228 -34 2287 80 20 3 chr10 24504041 24504341 -121084947 - AluSx SINE Alu -5 307 3 1653 191 154 12 chr10 24505018 24505426 -121083862 + MLT1C LTR MaLR 1 466 -1 2179 139 0 0 chr10 24505527 24505828 -121083460 + AluSx SINE Alu 1 301 -11 581 223 129 20 chr10 24505872 24506074 -121083214 - MIR SINE MIR -9 253 30 500 328 80 10 chr10 24506118 24506319 -121082969 - MIR SINE MIR -33 229 15 21 0 0 0 chr10 24507309 24507330 -121081958 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr10 24507554 24507583 -121081705 + AT_rich Low_complexity Low_complexity 1 29 0 327 273 197 25 chr10 24507597 24507661 -121081627 - MIR SINE MIR -27 235 183 6417 130 16 7 chr10 24507661 24508575 -121080713 - MER49 LTR ERV1 0 923 1 327 273 197 25 chr10 24508575 24508708 -121080580 - MIR SINE MIR -79 183 4 1423 199 40 59 chr10 24508770 24509017 -121080271 + Charlie1 DNA MER1_type 2349 2586 -175 1159 137 106 70 chr10 24509017 24509075 -121080213 + MER46A DNA MER2_type 1 55 -2676 1758 137 74 0 chr10 24509075 24509345 -121079943 - AluSx SINE Alu -17 295 6 1159 137 106 70 chr10 24509345 24509513 -121079775 + MER46A DNA MER2_type 55 235 -1 1423 199 40 59 chr10 24509513 24509686 -121079602 + Charlie1 DNA MER1_type 2586 2761 0 201 39 0 0 chr10 24509790 24509816 -121079472 + (T)n Simple_repeat Simple_repeat 1 26 0 511 241 148 42 chr10 24510090 24510306 -121078982 - MIR SINE MIR -1 261 23 1944 119 40 0 chr10 24511038 24511354 -121077934 - AluSx SINE Alu 0 312 1 447 219 93 20 chr10 24511860 24512011 -121077277 - MIR SINE MIR -9 253 92 330 111 0 83 chr10 24512491 24512563 -121076725 - MSTA LTR MaLR 0 426 361 2328 147 55 0 chr10 24512595 24512975 -121076313 - MSTA LTR MaLR -27 401 1 2422 93 3 0 chr10 24513525 24513836 -121075452 + AluSp SINE Alu 1 312 -1 224 200 30 44 chr10 24514260 24514395 -121074893 + (TATAA)n Simple_repeat Simple_repeat 2 134 0 480 254 14 60 chr10 24514420 24514526 -121074762 - L1M1 LINE L1 -4576 3170 3061 2272 109 0 6 chr10 24514526 24514838 -121074450 - AluSg SINE Alu 0 310 1 480 254 14 60 chr10 24514838 24514991 -121074297 - L1M1 LINE L1 -4685 3061 2851 * 4859 220 50 66 chr10 24514981 24516543 -121072745 - L1M4 LINE L1 -1197 4949 3413 2533 55 0 7 chr10 24516543 24516851 -121072437 + AluY SINE Alu 1 306 -5 4859 220 50 66 chr10 24516851 24516977 -121072311 - L1M4 LINE L1 -2733 3413 3287 475 254 52 46 chr10 24517690 24517863 -121071425 - MIR3 SINE MIR -1 207 34 2929 201 16 67 chr10 24517930 24518184 -121071104 + LTR8 LTR ERV1 16 282 -409 2689 139 55 0 chr10 24518184 24518588 -121070700 - MSTB LTR MaLR 0 426 1 2929 201 16 67 chr10 24518588 24519030 -121070258 + LTR8 LTR ERV1 282 676 -15 217 288 80 56 chr10 24519229 24519354 -121069934 + MIR3 SINE MIR 31 158 -50 201 323 63 47 chr10 24519391 24519518 -121069770 - MIR3 SINE MIR -76 132 4 1094 215 81 63 chr10 24519689 24520155 -121069133 - MER39 LTR ERV1 0 707 42 2220 104 3 3 chr10 24520155 24520453 -121068835 + AluSx SINE Alu 1 298 -14 224 200 30 44 chr10 24520890 24521025 -121068263 + (TATAA)n Simple_repeat Simple_repeat 2 134 0 480 254 14 60 chr10 24521050 24521156 -121068132 - L1M1 LINE L1 -4576 3170 3061 2261 112 0 6 chr10 24521156 24521468 -121067820 - AluSg SINE Alu 0 310 1 480 254 14 60 chr10 24521468 24521621 -121067667 - L1M1 LINE L1 -4685 3061 2851 * 7174 224 52 95 chr10 24521611 24523173 -121066115 - L1MCa LINE L1 -1197 5229 3602 2517 58 0 7 chr10 24523173 24523481 -121065807 + AluY SINE Alu 1 306 -5 7174 224 52 95 chr10 24523481 24523714 -121065574 - L1MCa LINE L1 -2824 3602 3361 943 53 0 0 chr10 24523714 24523827 -121065461 - AluY SINE Alu -6 305 193 7174 224 52 95 chr10 24523827 24525112 -121064176 - L1MCa LINE L1 -3065 3361 2023 284 0 28 0 chr10 24525112 24525148 -121064140 + (CA)n Simple_repeat Simple_repeat 2 38 0 7174 224 52 95 chr10 24525148 24525531 -121063757 - L1MCa LINE L1 -4403 2023 1639 1794 175 0 7 chr10 24525531 24525823 -121063465 - AluJo SINE Alu -22 290 1 7174 224 52 95 chr10 24525823 24526004 -121063284 - L1MCa LINE L1 -4787 1639 1452 755 185 9 37 chr10 24526004 24526193 -121063095 - MLT1A1 LTR MaLR 0 443 209 664 274 44 68 chr10 24526193 24526533 -121062755 - L1MCa LINE L1 -5689 727 396 446 311 64 17 chr10 24526649 24526884 -121062404 + HERV16 LTR ERVL 2060 2305 -2691 743 167 40 16 chr10 24527036 24527162 -121062126 + FLAM_A SINE Alu 1 129 -4 1646 170 7 14 chr10 24528402 24528684 -121060604 - AluJb SINE Alu -19 293 14 5054 118 8 5 chr10 24528874 24529609 -121059679 + L1PA13 LINE L1 5427 6163 0 801 123 0 72 chr10 24529646 24529784 -121059504 - FLAM_A SINE Alu 0 142 15 1638 158 25 11 chr10 24530221 24530505 -121058783 + AluJo SINE Alu 11 298 -14 1788 249 18 20 chr10 24530620 24531058 -121058230 + L1MC5 LINE L1 5389 5825 -1983 2424 218 142 88 chr10 24531078 24531783 -121057505 + L1MC5 LINE L1 6082 6747 -1214 1212 178 66 56 chr10 24531783 24532070 -121057218 + AluJo SINE Alu 1 290 -22 2424 218 142 88 chr10 24532070 24532291 -121056997 + L1MC5 LINE L1 6747 6955 -1006 1529 189 0 34 chr10 24532291 24532582 -121056706 + AluJb SINE Alu 1 281 -31 819 56 32 8 chr10 24532585 24532710 -121056578 + (GAAA)n Simple_repeat Simple_repeat 2 129 0 2424 218 142 88 chr10 24532710 24533464 -121055824 + L1MC5 LINE L1 6956 7881 -80 358 319 113 61 chr10 24533470 24533699 -121055589 + L1MEc LINE L1 175 415 -5981 2338 90 3 10 chr10 24533928 24534240 -121055048 + AluY SINE Alu 1 310 -1 597 247 23 6 chr10 24534512 24534686 -121054602 + MER104 DNA Tc2 4 180 0 279 331 78 21 chr10 24534724 24534866 -121054422 - L2 LINE L2 -467 2847 2698 410 119 0 0 chr10 24534872 24534931 -121054357 + MSTB1 LTR MaLR 1 59 -373 818 159 28 88 chr10 24536460 24536745 -121052543 + MER31-int LTR ERV1 1270 1686 -3250 247 260 240 0 chr10 24537610 24537710 -121051578 + L2 LINE L2 3174 3297 -16 219 225 0 0 chr10 24537676 24537716 -121051572 + MIR SINE MIR 219 258 -4 * 2061 179 35 5 chr10 24537881 24538256 -121051032 + MSTB LTR MaLR 41 426 0 1166 322 45 27 chr10 24538275 24539011 -121050277 - L2 LINE L2 -650 2664 1916 382 250 88 36 chr10 24539083 24539275 -121050013 + L1P5 LINE L1 5270 5471 -683 * 5417 163 22 3 chr10 24539256 24540942 -121048346 + L1PA16 LINE L1 4379 6099 -67 462 302 116 35 chr10 24541043 24541536 -121047752 + L1ME4a LINE L1 5578 6110 -11 1753 159 17 0 chr10 24542432 24542734 -121046554 - AluJb SINE Alu -5 307 1 577 281 101 60 chr10 24542906 24543088 -121046200 - MIR SINE MIR -12 250 56 1693 163 13 10 chr10 24543088 24543389 -121045899 - AluJo SINE Alu -10 302 1 577 281 101 60 chr10 24543389 24543423 -121045865 - MIR SINE MIR -206 56 25 1267 84 0 0 chr10 24543460 24543626 -121045662 - AluSg/x SINE Alu -22 290 125 345 186 53 0 chr10 24543626 24543739 -121045549 + (TA)n Simple_repeat Simple_repeat 2 120 0 876 147 0 0 chr10 24543740 24543883 -121045405 - FLAM_C SINE Alu 0 143 1 180 0 0 0 chr10 24544747 24544767 -121044521 + (CA)n Simple_repeat Simple_repeat 2 21 0 392 355 113 0 chr10 24544809 24544995 -121044293 + L2 LINE L2 2871 3077 -195 359 317 31 25 chr10 24545253 24545414 -121043874 + L2 LINE L2 3111 3272 0 771 201 0 0 chr10 24546407 24546581 -121042707 + (TG)n Simple_repeat Simple_repeat 1 174 0 1942 136 0 3 chr10 24546669 24546970 -121042318 - AluSx SINE Alu -12 300 1 466 290 78 61 chr10 24546972 24547327 -121041961 - L1ME3A LINE L1 -281 5889 5523 2194 101 0 0 chr10 24547327 24547623 -121041665 + AluSc SINE Alu 1 296 -13 466 290 78 61 chr10 24547623 24547739 -121041549 - L1ME3A LINE L1 -647 5523 5410 2169 104 0 25 chr10 24547833 24548150 -121041138 - AluSx SINE Alu -3 309 1 220 356 0 39 chr10 24548258 24548362 -121040926 + MIR SINE MIR 6 105 -157 727 264 43 39 chr10 24548407 24548638 -121040650 + MIR SINE MIR 5 236 -26 280 274 34 12 chr10 24548709 24548818 -121040470 - MIR SINE MIR -49 159 47 2046 136 0 10 chr10 24549869 24550179 -121039109 + AluSx SINE Alu 1 307 -5 251 133 79 0 chr10 24550228 24550393 -121038895 + (ATATG)n Simple_repeat Simple_repeat 3 180 0 293 152 48 8 chr10 24550401 24550526 -121038762 + (TATAA)n Simple_repeat Simple_repeat 5 134 0 298 113 49 28 chr10 24550648 24550790 -121038498 + (TA)n Simple_repeat Simple_repeat 2 146 0 10108 24 0 6 chr10 24550797 24552741 -121036547 + L1PA3 LINE L1 4214 6153 -2 376 34 68 62 chr10 24552755 24552932 -121036356 + (TA)n Simple_repeat Simple_repeat 1 178 0 1794 160 0 10 chr10 24553515 24553822 -121035466 + AluJo SINE Alu 1 304 -8 2043 257 36 15 chr10 24553897 24554423 -121034865 + MLT1H1 LTR MaLR 19 555 0 437 290 26 19 chr10 24554431 24554586 -121034702 + L1MB8 LINE L1 5590 5745 -425 669 185 23 7 chr10 24554874 24555145 -121034143 + GA-rich Low_complexity Low_complexity 1 275 0 310 298 24 0 chr10 24555158 24555242 -121034046 + GA-rich Low_complexity Low_complexity 3 88 0 246 287 85 54 chr10 24555379 24555508 -121033780 + L2 LINE L2 3180 3312 -1 2155 51 0 98 chr10 24557164 24557526 -121031762 - AluY SINE Alu 0 311 1 1993 90 53 30 chr10 24557744 24558043 -121031245 + AluSg SINE Alu 1 306 -4 241 341 63 0 chr10 24558170 24558296 -121030992 + L2 LINE L2 3137 3270 -2 585 289 26 56 chr10 24558325 24558591 -121030697 - MIR SINE MIR 0 262 5 185 357 122 0 chr10 24558609 24558707 -121030581 + L3 LINE CR1 502 611 -966 544 221 161 93 chr10 24558722 24559089 -121030199 - MLT1J2 LTR MaLR 0 450 59 1793 186 13 23 chr10 24559091 24559478 -121029810 + L1MB8 LINE L1 5795 6177 -1 259 311 81 43 chr10 24559488 24559649 -121029639 + L3 LINE CR1 770 936 -641 2141 115 0 0 chr10 24559887 24560182 -121029106 - AluSx SINE Alu -13 299 5 1322 148 4 37 chr10 24561016 24561260 -121028028 + AluJo SINE Alu 75 310 -2 303 140 0 0 chr10 24561268 24561318 -121027970 + (GGGA)n Simple_repeat Simple_repeat 3 52 0 2057 117 3 3 chr10 24561940 24562238 -121027050 + AluSx SINE Alu 1 298 -14 213 255 151 47 chr10 24562359 24562465 -121026823 + MIR SINE MIR 124 240 -22 1285 204 55 67 chr10 24562914 24563335 -121025953 + MLT1D LTR MaLR 1 416 -89 756 152 7 29 chr10 24563341 24563357 -121025931 - AluJb SINE Alu -176 136 121 189 74 0 0 chr10 24563357 24563384 -121025904 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 756 152 7 29 chr10 24563384 24563505 -121025783 - AluJb SINE Alu -191 121 2 1871 145 7 0 chr10 24563558 24563848 -121025440 + AluSx SINE Alu 14 305 -7 319 171 143 0 chr10 24563849 24563919 -121025369 + MLT1D LTR MaLR 426 505 0 625 150 0 47 chr10 24564157 24564284 -121025004 + FLAM_A SINE Alu 22 142 0 1064 232 90 12 chr10 24565241 24565564 -121023724 + L1ME3A LINE L1 5602 5949 -221 227 263 166 51 chr10 24565628 24565803 -121023485 + L1ME3A LINE L1 5962 6156 -14 415 295 96 26 chr10 24565877 24566378 -121022910 - L1ME4a LINE L1 0 6121 5586 319 320 41 8 chr10 24566685 24566807 -121022481 + MIR SINE MIR 117 242 -20 1203 286 35 33 chr10 24567159 24567585 -121021703 - MLT1J2 LTR MaLR 0 450 24 246 273 0 0 chr10 24567634 24567689 -121021599 + (TA)n Simple_repeat Simple_repeat 2 56 0 305 265 72 12 chr10 24567690 24567773 -121021515 - L1MC4 LINE L1 -1340 6702 6615 1696 164 29 0 chr10 24568596 24568876 -121020412 + AluJb SINE Alu 4 291 -21 413 233 25 36 chr10 24570154 24570291 -121018997 - MIR SINE MIR -63 145 43 23 0 0 0 chr10 24572726 24572749 -121016539 + GC_rich Low_complexity Low_complexity 1 23 0 501 352 86 12 chr10 24574396 24574723 -121014565 + L2 LINE L2 2422 2772 -542 24 0 0 0 chr10 24574998 24575022 -121014266 + AT_rich Low_complexity Low_complexity 1 24 0 249 276 0 0 chr10 24575186 24575244 -121014044 + L2 LINE L2 3214 3271 -1 1378 285 29 27 chr10 24575457 24575902 -121013386 - MLT1J LTR MaLR -65 446 1 922 256 75 47 chr10 24576113 24576473 -121012815 - MLT1I LTR MaLR -1 408 39 241 176 59 82 chr10 24577550 24577635 -121011653 - AluSc SINE Alu 0 299 217 1707 141 19 0 chr10 24577761 24578030 -121011258 - AluSg SINE Alu -36 274 1 214 347 61 20 chr10 24578159 24578257 -121011031 + L2 LINE L2 3170 3271 -1 1517 153 117 0 chr10 24578360 24578634 -121010654 + AluJb SINE Alu 1 306 -6 230 206 48 0 chr10 24578683 24578746 -121010542 + Charlie7 DNA MER1_type 44 109 -2503 * 372 173 45 60 chr10 24578724 24578857 -121010431 + Charlie7 DNA MER1_type 2437 2567 -45 879 282 66 63 chr10 24578915 24578958 -121010330 + MLT1J LTR MaLR 36 77 -434 4428 29 0 2 chr10 24578958 24579464 -121009824 + L1PA5 LINE L1 5636 6142 -12 198 0 0 0 chr10 24579464 24579486 -121009802 + (TA)n Simple_repeat Simple_repeat 1 22 0 879 282 66 63 chr10 24579492 24579859 -121009429 + MLT1J LTR MaLR 77 447 -64 321 327 128 49 chr10 24580127 24580353 -121008935 - MIR SINE MIR -6 256 13 244 315 0 0 chr10 24580538 24580611 -121008677 + (TA)n Simple_repeat Simple_repeat 1 73 0 248 188 25 25 chr10 24580774 24580854 -121008434 + (TTAA)n Simple_repeat Simple_repeat 2 81 0 1753 174 26 0 chr10 24581876 24582180 -121007108 - AluJb SINE Alu 0 312 1 573 232 33 20 chr10 24582482 24582633 -121006655 - MIR SINE MIR -2 260 108 1265 145 5 10 chr10 24583683 24583890 -121005398 + L1PB3 LINE L1 5946 6151 -3 1071 133 0 16 chr10 24584130 24584318 -121004970 + L1MA4 LINE L1 6115 6299 -1 26 0 0 0 chr10 24584319 24584345 -121004943 + AT_rich Low_complexity Low_complexity 1 26 0 1283 146 163 12 chr10 24584476 24584743 -121004545 - AluSx SINE Alu 0 304 1 521 210 116 55 chr10 24584794 24584975 -121004313 - L1MC4a LINE L1 -1874 5934 5743 1006 151 0 0 chr10 24585609 24585775 -121003513 + FRAM SINE Alu 4 169 -7 587 163 0 0 chr10 24585896 24585988 -121003300 + AluJ/FLAM SINE Alu 6 97 -215 677 176 0 0 chr10 24586114 24586222 -121003066 + FLAM_C SINE Alu 11 118 -25 296 193 0 0 chr10 24586251 24586308 -121002980 + MIR SINE MIR 68 124 -84 189 107 0 0 chr10 24586920 24586948 -121002340 + (GA)n Simple_repeat Simple_repeat 2 29 0 823 192 0 0 chr10 24586974 24587125 -121002163 + FRAM SINE Alu 5 155 -21 378 42 0 0 chr10 24587460 24587508 -121001780 + (TC)n Simple_repeat Simple_repeat 2 49 0 288 0 0 0 chr10 24587792 24587824 -121001464 + (TG)n Simple_repeat Simple_repeat 1 32 0 2018 106 0 0 chr10 24588218 24588493 -121000795 + AluSx SINE Alu 1 275 -37 360 0 0 0 chr10 24588868 24588908 -121000380 + (CA)n Simple_repeat Simple_repeat 2 41 0 23 78 0 0 chr10 24590477 24590528 -120998760 + GC_rich Low_complexity Low_complexity 1 51 0 23 33 0 0 chr10 24590694 24590724 -120998564 + GC_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr10 24591048 24591071 -120998217 + GC_rich Low_complexity Low_complexity 1 23 0 246 195 32 41 chr10 24591237 24591360 -120997928 + (CGG)n Simple_repeat Simple_repeat 1 122 0 228 220 0 0 chr10 24591513 24591572 -120997716 + G-rich Low_complexity Low_complexity 5 63 0 23 0 0 0 chr10 24591768 24591791 -120997497 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr10 24592485 24592509 -120996779 + AT_rich Low_complexity Low_complexity 1 24 0 327 257 0 67 chr10 24592886 24592991 -120996297 - MIR SINE MIR -80 182 85 212 143 0 0 chr10 24595937 24595972 -120993316 + (CCCCCT)n Simple_repeat Simple_repeat 6 40 0 201 213 0 0 chr10 24604833 24604880 -120984408 + (TA)n Simple_repeat Simple_repeat 2 48 0 26 50 0 0 chr10 24605280 24605320 -120983968 + AT_rich Low_complexity Low_complexity 1 40 0 193 214 129 29 chr10 24607004 24607074 -120982214 + L2 LINE L2 3196 3272 0 455 253 65 65 chr10 24607150 24607336 -120981952 + MLT1H LTR MaLR 106 291 -258 183 318 53 58 chr10 24607598 24607787 -120981501 - L2 LINE L2 -1104 2210 2023 839 190 69 75 chr10 24607787 24608111 -120981177 + L1MA9 LINE L1 5990 6305 -7 2056 151 0 0 chr10 24608130 24608435 -120980853 + AluJb SINE Alu 1 305 -7 2002 156 0 10 chr10 24608834 24609135 -120980153 - AluSx SINE Alu -14 298 1 1722 191 66 66 chr10 24609436 24609869 -120979419 - MLT1C LTR MaLR 0 467 32 207 0 0 0 chr10 24609869 24609892 -120979396 + (TG)n Simple_repeat Simple_repeat 1 23 0 1722 191 66 66 chr10 24609892 24609925 -120979363 - MLT1C LTR MaLR -434 33 1 2106 186 103 5 chr10 24610355 24610780 -120978508 + MLT1C LTR MaLR 1 467 0 414 0 0 0 chr10 24611191 24611237 -120978051 + (GA)n Simple_repeat Simple_repeat 1 46 0 464 241 200 38 chr10 24611486 24611776 -120977512 + L1ME3A LINE L1 895 1231 -4888 303 245 64 21 chr10 24611821 24612012 -120977276 + L1ME3A LINE L1 1266 1619 -871 242 318 112 17 chr10 24612254 24612657 -120976631 + L1ME3A LINE L1 2105 2545 -3584 383 281 161 35 chr10 24612786 24613152 -120976136 + L1ME3A LINE L1 2847 3166 -2963 2102 132 0 3 chr10 24613152 24613448 -120975840 + AluSx SINE Alu 1 295 -17 383 281 161 35 chr10 24613448 24613672 -120975616 + L1ME3A LINE L1 3166 3511 -2618 2075 96 0 0 chr10 24614329 24614589 -120974699 - AluSg SINE Alu -16 294 35 601 281 143 25 chr10 24614617 24615148 -120974140 + L1ME3A LINE L1 3553 4146 -1983 902 273 121 35 chr10 24615178 24615735 -120973553 + L1ME3A LINE L1 5241 5851 -294 1556 172 20 26 chr10 24617176 24617478 -120971810 - AluJb SINE Alu -12 300 1 21 36 0 0 chr10 24618785 24618813 -120970475 + AT_rich Low_complexity Low_complexity 1 28 0 1652 197 0 17 chr10 24618915 24619215 -120970073 + AluJo SINE Alu 1 295 -17 295 239 51 77 chr10 24619361 24619478 -120969810 - MIR SINE MIR -48 214 101 628 264 63 10 chr10 24619611 24619817 -120969471 + MIR SINE MIR 6 218 -44 1776 135 212 33 chr10 24620076 24620439 -120968849 - MSTA LTR MaLR 0 428 1 444 182 0 0 chr10 24620610 24620676 -120968612 - U4 snRNA snRNA -79 66 1 1523 179 59 0 chr10 24621418 24621691 -120967597 + L1PA16 LINE L1 5873 6161 -5 479 171 0 146 chr10 24621768 24621891 -120967397 + AluJb SINE Alu 86 190 -122 497 121 205 0 chr10 24621891 24621974 -120967314 - AluJ/FLAM SINE Alu -210 102 3 1624 157 33 47 chr10 24622107 24622407 -120966881 - AluJb SINE Alu -15 297 2 13689 65 6 0 chr10 24623159 24624907 -120964381 + L1PA5 LINE L1 741 2498 -3648 385 22 0 0 chr10 24625031 24625076 -120964212 + L1PA5 LINE L1 2521 2565 -3581 24456 44 7 0 chr10 24625076 24628724 -120960564 + L1PA5 LINE L1 2497 6154 0 407 210 30 0 chr10 24628730 24628830 -120960458 + L1ME3A LINE L1 2395 2497 -3649 1111 285 88 39 chr10 24628867 24629076 -120960212 + L1ME3A LINE L1 4386 4583 -1581 236 77 26 0 chr10 24629076 24629115 -120960173 + (TTTTG)n Simple_repeat Simple_repeat 5 44 0 1111 285 88 39 chr10 24629115 24630047 -120959241 + L1ME3A LINE L1 4583 5585 -579 1173 164 84 19 chr10 24630104 24630318 -120958970 - AluJb SINE Alu -22 290 63 457 299 86 73 chr10 24630318 24630703 -120958585 + MLT1J LTR MaLR 78 467 -44 701 286 46 46 chr10 24630739 24631089 -120958199 + L1ME3A LINE L1 5600 5949 -221 1914 177 0 0 chr10 24632007 24632301 -120956987 + AluJo SINE Alu 5 298 -14 277 217 0 0 chr10 24633167 24633235 -120956053 + L1PA13 LINE L1 5508 5575 -576 3603 93 2 14 chr10 24633367 24633853 -120955435 + L1PA13 LINE L1 5676 6155 -8 2268 103 10 10 chr10 24633897 24634209 -120955079 + AluSq SINE Alu 1 312 -1 645 217 28 7 chr10 24634221 24634364 -120954924 + L1ME2 LINE L1 4713 4858 -1288 267 284 68 11 chr10 24634386 24634474 -120954814 - MLT1G1 LTR MaLR -502 93 1 2407 187 66 81 chr10 24634474 24634668 -120954620 + L1ME2 LINE L1 5125 5320 -844 800 170 28 44 chr10 24634668 24634850 -120954438 + L1MB2 LINE L1 5991 6169 -2 2407 187 66 81 chr10 24634850 24635003 -120954285 + L1ME2 LINE L1 5320 5474 -690 2017 91 11 11 chr10 24635003 24635131 -120954157 + AluSg SINE Alu 5 132 -187 2613 47 0 19 chr10 24635131 24635448 -120953840 + AluY SINE Alu 1 311 0 2017 91 11 11 chr10 24635448 24635634 -120953654 + AluSg SINE Alu 131 319 0 2407 187 66 81 chr10 24635634 24635760 -120953528 + L1ME2 LINE L1 5474 5600 -564 2273 111 3 0 chr10 24635760 24636058 -120953230 + AluSx SINE Alu 1 299 -13 3640 82 21 4 chr10 24636059 24636532 -120952756 - L1PA15 LINE L1 -13 6152 5672 2407 187 66 81 chr10 24636532 24636929 -120952359 + L1ME2 LINE L1 5599 5981 -183 460 247 110 13 chr10 24637124 24637278 -120952010 + L1ME2 LINE L1 5987 6155 -9 357 331 22 29 chr10 24637429 24637565 -120951723 + L2 LINE L2 3136 3270 -2 281 305 110 61 chr10 24638786 24638950 -120950338 + L2 LINE L2 3058 3229 -43 30 45 0 0 chr10 24639246 24639290 -120949998 + AT_rich Low_complexity Low_complexity 1 44 0 1294 148 0 28 chr10 24639331 24639547 -120949741 + AluJb SINE Alu 88 297 -15 779 298 99 3 chr10 24639577 24639859 -120949429 + L1MC4a LINE L1 6612 6920 -888 274 157 9 222 chr10 24639900 24640008 -120949280 + MLT1D-int LTR MaLR 568 652 -719 2195 210 39 124 chr10 24640063 24640843 -120948445 + MLT1D-int LTR MaLR 659 1371 0 986 210 19 19 chr10 24640843 24641057 -120948231 + MLT1D LTR MaLR 1 214 -291 902 289 132 32 chr10 24641057 24641305 -120947983 + L1MEc LINE L1 1276 1498 -4717 2213 112 3 7 chr10 24641305 24641610 -120947678 - AluSg SINE Alu -6 304 1 902 289 132 32 chr10 24641610 24642732 -120946556 + L1MEc LINE L1 1498 2749 -3466 1038 110 18 25 chr10 24642743 24642906 -120946382 + AluSp SINE Alu 1 162 -151 1452 72 5 10 chr10 24643019 24643212 -120946076 + AluSp SINE Alu 109 300 -13 1052 206 67 58 chr10 24643214 24643405 -120945883 + L1MEc LINE L1 2753 2941 -3274 1868 171 3 0 chr10 24643405 24643697 -120945591 - AluJb SINE Alu -19 293 1 1052 206 67 58 chr10 24643697 24643971 -120945317 + L1MEc LINE L1 2941 3222 -2993 5144 166 20 9 chr10 24643972 24645879 -120943409 + L1PA15 LINE L1 4247 6165 0 433 207 62 78 chr10 24645891 24646084 -120943204 + L1MEc LINE L1 3206 3395 -2820 704 140 9 0 chr10 24646086 24646193 -120943095 + Tigger3(Golem) DNA MER2_type 1 108 -2921 746 111 21 21 chr10 24646193 24646337 -120942951 + Tigger3(Golem) DNA MER2_type 2284 2427 -602 949 132 7 14 chr10 24646346 24646490 -120942798 - AluJb SINE Alu -27 285 143 3740 112 33 10 chr10 24646491 24647090 -120942198 + Tigger3(Golem) DNA MER2_type 2416 3028 -1 342 229 62 56 chr10 24647102 24647281 -120942007 + L1MEc LINE L1 3406 3585 -2630 1527 90 0 24 chr10 24648454 24648666 -120940622 + AluSq SINE Alu 105 311 -2 1936 163 3 0 chr10 24650322 24650610 -120938678 + AluJo SINE Alu 1 289 -23 229 321 69 23 chr10 24651549 24651767 -120937521 - L1MEd LINE L1 -4945 1174 947 24 53 0 0 chr10 24651877 24651915 -120937373 + AT_rich Low_complexity Low_complexity 1 38 0 337 305 11 21 chr10 24651969 24652064 -120937224 - L2 LINE L2 -1 3312 3219 281 357 54 67 chr10 24652120 24652230 -120937058 - L2 LINE L2 -838 2476 2366 212 0 36 0 chr10 24652230 24652258 -120937030 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 281 357 54 67 chr10 24652258 24652337 -120936951 - L2 LINE L2 -948 2366 2288 2255 104 51 25 chr10 24652337 24652692 -120936596 + THE1B LTR MaLR 1 364 0 281 357 54 67 chr10 24652692 24652815 -120936473 - L2 LINE L2 -1026 2288 2167 2234 102 0 7 chr10 24653718 24654011 -120935277 - AluSq SINE Alu -22 291 1 27 0 0 0 chr10 24654014 24654041 -120935247 + AT_rich Low_complexity Low_complexity 1 27 0 1689 188 10 7 chr10 24655561 24655853 -120933435 - AluJo SINE Alu -19 293 1 1036 268 68 37 chr10 24655879 24656424 -120932864 + L1MCa LINE L1 65 582 -5841 1023 290 103 69 chr10 24656436 24657071 -120932217 + L1MCa LINE L1 464 1129 -5294 1685 196 0 4 chr10 24657071 24657352 -120931936 + AluJb SINE Alu 2 281 -31 1023 290 103 69 chr10 24657352 24657441 -120931847 + L1MCa LINE L1 1129 1213 -5210 201 262 0 0 chr10 24657473 24657515 -120931773 + (TATG)n Simple_repeat Simple_repeat 2 43 0 295 206 41 0 chr10 24657535 24657608 -120931680 + L1MCa LINE L1 1251 1326 -5097 1029 189 37 0 chr10 24758452 24758643 -120830645 - MER45B DNA AcHobo -1 1039 842 526 178 0 11 chr10 24758655 24758745 -120830543 - FLAM_C SINE Alu -26 117 29 1519 207 0 17 chr10 24758893 24759192 -120830096 - AluSx SINE Alu -18 294 1 976 219 0 0 chr10 24759534 24759717 -120829571 + AluJo SINE Alu 118 300 -12 3088 152 77 54 chr10 24759720 24760275 -120829013 + L1MB7 LINE L1 5480 6021 -163 1820 172 3 0 chr10 24760275 24760572 -120828716 + AluJb SINE Alu 14 311 -1 3088 152 77 54 chr10 24760572 24760585 -120828703 + L1MB7 LINE L1 6021 6032 -152 1435 184 43 29 chr10 24760585 24760706 -120828582 + AluJo SINE Alu 1 119 -192 225 0 0 0 chr10 24760706 24760731 -120828557 + (TAA)n Simple_repeat Simple_repeat 1 25 0 1435 184 43 29 chr10 24760731 24760916 -120828372 + AluJo SINE Alu 119 311 0 3088 152 77 54 chr10 24760916 24761007 -120828281 + L1MB7 LINE L1 6032 6158 -26 207 0 0 0 chr10 24761111 24761134 -120828154 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 230 236 73 0 chr10 24761614 24761669 -120827619 - L2 LINE L2 -4 3268 3210 1963 136 0 17 chr10 24761831 24762133 -120827155 - AluSx SINE Alu -15 297 1 302 311 60 24 chr10 24762190 24762357 -120826931 + MIR SINE MIR 82 254 -8 671 254 75 25 chr10 24762506 24762707 -120826581 + MER57B LTR ERV1 1 211 -223 702 232 14 0 chr10 24762948 24763090 -120826198 - L1ME3A LINE L1 -5 6165 6022 525 169 0 119 chr10 24763877 24763944 -120825344 + U13 snRNA snRNA 1 50 -54 1751 179 10 0 chr10 24763944 24764245 -120825043 + AluJo SINE Alu 4 307 -5 525 169 0 119 chr10 24764245 24764295 -120824993 + U13 snRNA snRNA 50 104 0 396 228 25 0 chr10 24764487 24764566 -120824722 + MER21B LTR ERV1 5 85 -778 1534 174 3 63 chr10 24764732 24764907 -120824381 - AluJo SINE Alu -14 298 114 198 0 0 0 chr10 24764907 24764929 -120824359 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 1996 108 41 0 chr10 24764930 24765198 -120824090 - AluSc SINE Alu -30 279 1 1534 174 3 63 chr10 24765198 24765336 -120823952 - AluJo SINE Alu -197 115 2 1459 94 14 9 chr10 24765513 24765725 -120823563 - L1MA2 LINE L1 0 6304 6092 1728 230 113 62 chr10 24765740 24766254 -120823034 + MLT1F LTR MaLR 1 540 -2 342 194 0 0 chr10 24766288 24766350 -120822938 - MSTA LTR MaLR -1 427 366 885 129 8 0 chr10 24766743 24766867 -120822421 - FLAM_C SINE Alu -18 125 1 26 50 0 0 chr10 24766867 24766907 -120822381 + AT_rich Low_complexity Low_complexity 1 40 0 2190 149 136 18 chr10 24767272 24767655 -120821633 + MSTA LTR MaLR 1 428 0 279 343 61 0 chr10 24767667 24767766 -120821522 - L2 LINE L2 0 3272 3168 929 148 0 0 chr10 24767975 24768103 -120821185 + FLAM_C SINE Alu 1 128 -5 351 0 0 0 chr10 24768509 24768548 -120820740 + (TG)n Simple_repeat Simple_repeat 2 40 0 1719 174 31 3 chr10 24768548 24768835 -120820453 - AluJb SINE Alu -17 295 1 22 35 0 0 chr10 24769502 24769531 -120819757 + AT_rich Low_complexity Low_complexity 1 29 0 804 178 0 0 chr10 24769572 24769701 -120819587 - AluJb SINE Alu -183 129 1 1032 112 0 0 chr10 24769734 24769877 -120819411 + L1PB1 LINE L1 6008 6150 -1 189 0 0 0 chr10 24770084 24770105 -120819183 + (CA)n Simple_repeat Simple_repeat 1 21 0 2594 134 7 19 chr10 24770220 24770637 -120818651 - MER50 LTR ERV1 -321 413 2 345 289 67 0 chr10 24770638 24770742 -120818546 + MER34B LTR ERV1 452 562 -3 303 311 25 19 chr10 24770769 24770930 -120818358 - LTR23 LTR ERV1 0 437 276 1753 152 0 62 chr10 24770933 24771255 -120818033 + AluJo SINE Alu 1 302 -10 1355 145 18 26 chr10 24771282 24771510 -120817778 - L1PA16 LINE L1 0 6166 5941 1080 151 73 5 chr10 24771613 24771819 -120817469 + MSTB1 LTR MaLR 213 432 0 895 192 5 96 chr10 24771991 24772122 -120817166 - MER5A DNA MER1_type 0 189 82 1770 169 36 0 chr10 24772122 24772423 -120816865 - AluSx SINE Alu 0 312 1 895 192 5 96 chr10 24772423 24772499 -120816789 - MER5A DNA MER1_type -107 82 1 744 266 107 60 chr10 24772575 24773090 -120816198 - MER34 LTR ERV1 -3 539 1 319 246 109 18 chr10 24773123 24773233 -120816055 - MIR SINE MIR -51 211 92 1822 122 0 8 chr10 24773497 24773752 -120815536 - AluSq SINE Alu -60 253 1 570 180 0 36 chr10 24773908 24774019 -120815269 + FLAM_C SINE Alu 37 143 0 25 51 0 0 chr10 24774649 24774688 -120814600 + AT_rich Low_complexity Low_complexity 1 39 0 1465 163 0 4 chr10 24774711 24774950 -120814338 + AluJo SINE Alu 75 312 0 495 33 0 0 chr10 24775580 24775641 -120813647 + (TTCC)n Simple_repeat Simple_repeat 4 64 0 1827 160 33 0 chr10 24775666 24775843 -120813445 - AluSx SINE Alu -2 310 117 207 114 0 0 chr10 24775843 24775878 -120813410 + (TG)n Simple_repeat Simple_repeat 2 36 0 1827 160 33 0 chr10 24775878 24776000 -120813288 - AluSx SINE Alu -195 117 1 222 37 0 0 chr10 24776524 24776551 -120812737 + (CA)n Simple_repeat Simple_repeat 2 28 0 854 195 19 0 chr10 24776579 24776733 -120812555 - AluJb SINE Alu -24 288 132 1815 133 3 67 chr10 24776736 24777051 -120812237 - AluSx SINE Alu -17 295 1 3484 178 11 40 chr10 24777368 24778086 -120811202 - Tigger5 DNA MER2_type -647 1676 980 1184 211 0 5 chr10 24778093 24778306 -120810982 - AluJo SINE Alu -100 212 1 475 202 22 0 chr10 24778318 24778407 -120810881 - Tigger5 DNA MER2_type -2232 91 1 2154 134 3 10 chr10 24778636 24778943 -120810345 + AluSx SINE Alu 1 305 -7 238 340 54 27 chr10 24779240 24779425 -120809863 + LTR67 LTR ERVL 64 253 -304 248 273 121 10 chr10 24779528 24779627 -120809661 + LTR67 LTR ERVL 445 554 -3 715 206 0 8 chr10 24780140 24780271 -120809017 + FLAM_C SINE Alu 2 131 -12 828 121 171 0 chr10 24781124 24781264 -120808024 + MSTA LTR MaLR 1 164 -264 853 166 6 6 chr10 24781370 24781527 -120807761 + FRAM SINE Alu 20 176 0 1681 186 7 13 chr10 24781769 24782075 -120807213 - AluJo SINE Alu -7 305 2 4002 113 51 10 chr10 24782204 24782790 -120806498 + MER4B LTR ERV1 1 610 0 22 56 0 0 chr10 24782830 24782866 -120806422 + AT_rich Low_complexity Low_complexity 1 36 0 270 0 0 0 chr10 24783443 24783473 -120805815 + (A)n Simple_repeat Simple_repeat 1 30 0 1141 157 0 16 chr10 24783473 24783664 -120805624 + AluSp SINE Alu 121 308 -5 200 122 24 0 chr10 24784376 24784417 -120804871 + (TG)n Simple_repeat Simple_repeat 1 42 0 2233 119 28 14 chr10 24784829 24785181 -120804107 - MER21A LTR ERV1 0 931 575 21 0 0 0 chr10 24785529 24785550 -120803738 + AT_rich Low_complexity Low_complexity 1 21 0 205 146 0 42 chr10 24786144 24786187 -120803101 + (TA)n Simple_repeat Simple_repeat 1 42 0 2192 117 0 10 chr10 24786187 24786486 -120802802 - AluSq SINE Alu -17 296 1 992 199 0 25 chr10 24786507 24786708 -120802580 - AluJ SINE Alu -1 311 116 327 197 15 15 chr10 24787603 24787669 -120801619 + AluJ/FLAM SINE Alu 1 66 -236 551 111 0 0 chr10 24787769 24787850 -120801438 + AluY SINE Alu 201 281 -30 3685 145 9 14 chr10 24787864 24788445 -120800843 - MER50 LTR ERV1 -156 578 1 875 165 0 15 chr10 24788471 24788604 -120800684 - AluJ SINE Alu -171 131 1 391 300 8 8 chr10 24788767 24788897 -120800391 - L3b LINE CR1 -352 1231 1102 402 162 0 29 chr10 24789104 24789172 -120800116 + AluJ/FLAM SINE Alu 3 68 -244 975 169 5 50 chr10 24789280 24789330 -120799958 - Charlie1 DNA MER1_type -199 2562 2511 1888 142 3 39 chr10 24789330 24789639 -120799649 + AluJb SINE Alu 1 298 -14 975 169 5 50 chr10 24789639 24789789 -120799499 - Charlie1 DNA MER1_type -250 2511 2371 286 314 0 0 chr10 24789794 24789864 -120799424 - Charlie1 DNA MER1_type -2690 71 2 270 280 92 46 chr10 24789889 24790107 -120799181 - L2 LINE L2 -1155 2159 1932 188 33 0 33 chr10 24790289 24790319 -120798969 + (TTG)n Simple_repeat Simple_repeat 2 30 0 817 141 31 0 chr10 24790319 24790442 -120798846 - FRAM SINE Alu -26 150 24 1297 228 92 42 chr10 24790455 24790881 -120798407 + MLT1J LTR MaLR 65 511 0 1717 162 13 36 chr10 24791034 24791342 -120797946 + AluJb SINE Alu 1 301 -11 381 282 67 41 chr10 24791393 24791588 -120797700 + LTR33 LTR ERVL 1 200 -321 383 190 0 153 chr10 24791703 24791764 -120797524 + LTR33 LTR ERVL 405 435 -86 892 140 0 22 chr10 24791764 24791900 -120797388 - FLAM_C SINE Alu 0 133 1 383 190 0 153 chr10 24791900 24791975 -120797313 + LTR33 LTR ERVL 435 520 -1 194 328 90 33 chr10 24791976 24792098 -120797190 - L2 LINE L2 -2065 1249 1121 950 210 46 25 chr10 24792281 24792519 -120796769 - MER90 LTR ERV1 -8 606 364 948 171 0 0 chr10 24792543 24792701 -120796587 - FRAM SINE Alu -1 175 18 607 304 33 8 chr10 24792708 24792951 -120796337 - MER90 LTR ERV1 -316 259 11 1979 165 0 0 chr10 24792984 24793287 -120796001 - AluJb SINE Alu -9 303 1 1010 172 5 30 chr10 24793355 24793579 -120795709 + AluJb SINE Alu 118 312 0 863 195 0 58 chr10 24794229 24794403 -120794885 + AluJo SINE Alu 22 185 -127 2556 151 38 31 chr10 24794537 24794962 -120794326 - MSTC LTR MaLR 0 428 1 2999 193 35 7 chr10 24795151 24795696 -120793592 - MER68 LTR ERV1 0 562 3 708 172 31 8 chr10 24795865 24795993 -120793295 + AluJ SINE Alu 1 131 -171 21 71 0 0 chr10 24796436 24796478 -120792810 + AT_rich Low_complexity Low_complexity 1 42 0 200 179 51 0 chr10 24796605 24796644 -120792644 + L2 LINE L2 3010 3050 -222 209 341 71 0 chr10 24797283 24797368 -120791920 + MIR SINE MIR 23 113 -95 387 303 67 0 chr10 24797368 24797487 -120791801 - L2 LINE L2 0 3313 3187 825 170 80 37 chr10 24797974 24798162 -120791126 + AluJ SINE Alu 117 312 0 1263 177 57 21 chr10 24798181 24798292 -120790996 + AluJb SINE Alu 9 115 -197 222 37 0 0 chr10 24798292 24798319 -120790969 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 1263 177 57 21 chr10 24798319 24798489 -120790799 + AluJb SINE Alu 115 300 -12 29 47 0 0 chr10 24798778 24798821 -120790467 + GC_rich Low_complexity Low_complexity 1 43 0 216 196 0 0 chr10 24800591 24800637 -120788651 + T-rich Low_complexity Low_complexity 1 46 0 204 125 0 0 chr10 24801227 24801259 -120788029 + (TTA)n Simple_repeat Simple_repeat 3 34 0 771 139 7 44 chr10 24801313 24801450 -120787838 - FRAM SINE Alu -44 132 1 282 313 111 35 chr10 24801576 24801720 -120787568 + L2 LINE L2 2895 3049 -223 513 169 0 11 chr10 24802155 24802244 -120787044 + MER4A LTR ERV1 1 88 -576 1360 142 23 28 chr10 24802254 24802557 -120786731 + MER4A LTR ERV1 261 620 -44 2031 157 0 0 chr10 24802557 24802869 -120786419 - AluSx SINE Alu 0 312 1 3874 147 43 6 chr10 24802870 24803491 -120785797 - MER4D LTR ERV1 -259 644 1 183 100 0 0 chr10 24803612 24803642 -120785646 + (TTATA)n Simple_repeat Simple_repeat 2 31 0 1612 185 3 3 chr10 24803645 24803932 -120785356 - AluJo SINE Alu -25 287 1 21 0 0 0 chr10 24803934 24803955 -120785333 + AT_rich Low_complexity Low_complexity 1 21 0 25 51 0 0 chr10 24804017 24804056 -120785232 + AT_rich Low_complexity Low_complexity 1 39 0 2284 86 0 7 chr10 24804258 24804587 -120784701 - AluY SINE Alu 0 311 1 231 114 0 0 chr10 24804870 24804905 -120784383 + (TC)n Simple_repeat Simple_repeat 1 35 0 389 295 94 13 chr10 24805214 24805363 -120783925 - MIR3 SINE MIR -11 197 37 425 285 108 0 chr10 24805753 24805911 -120783377 - MER112 DNA MER1_type -6 254 80 516 32 0 0 chr10 24806084 24806146 -120783142 + (TG)n Simple_repeat Simple_repeat 2 63 0 914 199 11 6 chr10 24806148 24806324 -120782964 - MER20 DNA MER1_type 0 219 43 1667 165 7 13 chr10 24806391 24806694 -120782594 - AluJo SINE Alu -11 301 1 1784 172 0 10 chr10 24806703 24807000 -120782288 - AluJo SINE Alu -13 299 6 2039 212 77 18 chr10 24807220 24807659 -120781629 - MER21B LTR ERV1 -11 852 388 583 183 66 36 chr10 24807705 24807842 -120781446 - MER21B LTR ERV1 -636 227 87 1527 180 0 4 chr10 24807843 24808098 -120781190 + AluJo SINE Alu 21 274 -38 254 234 0 0 chr10 24808202 24808249 -120781039 - AluJ SINE Alu -118 184 138 321 218 173 23 chr10 24808340 24808473 -120780815 + MIR3 SINE MIR 33 185 -23 372 212 182 30 chr10 24808582 24808714 -120780574 + MIR SINE MIR 47 198 -64 341 247 41 21 chr10 24808715 24808812 -120780476 + MIR SINE MIR 153 251 -11 896 150 0 0 chr10 24808963 24809096 -120780192 - AluJ SINE Alu -169 133 1 2489 87 0 0 chr10 24809590 24809900 -120779388 + AluSg SINE Alu 1 310 0 1386 167 19 68 chr10 24809919 24810230 -120779058 + AluJo SINE Alu 5 300 -12 832 200 31 19 chr10 24810289 24810449 -120778839 + AluJo SINE Alu 121 282 -30 204 67 0 0 chr10 24810624 24810654 -120778634 + (TTTTA)n Simple_repeat Simple_repeat 2 31 0 593 167 10 0 chr10 24810664 24810760 -120778528 - AluJo SINE Alu -37 275 179 * 680 189 9 0 chr10 24810759 24810870 -120778418 - AluJo SINE Alu -180 132 21 409 307 9 0 chr10 24810957 24811071 -120778217 + L2 LINE L2 3155 3269 -3 366 257 81 15 chr10 24811189 24811325 -120777963 - L1ME LINE L1 -476 5645 5501 1982 98 11 3 chr10 24812169 24812474 -120776814 - AluSx SINE Alu 0 307 1 22 56 0 0 chr10 24812854 24812890 -120776398 + AT_rich Low_complexity Low_complexity 1 36 0 282 300 0 0 chr10 24813427 24813517 -120775771 + MIR SINE MIR 63 152 -110 2175 133 0 0 chr10 24813674 24813976 -120775312 + AluSx SINE Alu 1 302 -10 1724 154 23 39 chr10 24815195 24815500 -120773788 - AluJo SINE Alu -12 300 1 246 272 22 54 chr10 24815723 24815815 -120773473 + LTR67 LTR ERVL 454 542 -15 2114 231 104 113 chr10 24815828 24816249 -120773039 - HAL1 LINE L1 -906 1601 1178 2130 127 27 0 chr10 24816249 24816548 -120772740 - AluSx SINE Alu -5 307 1 2114 231 104 113 chr10 24816548 24817603 -120771685 - HAL1 LINE L1 -1329 1178 139 234 0 0 0 chr10 24817710 24817736 -120771552 + (CAA)n Simple_repeat Simple_repeat 1 26 0 1993 137 7 10 chr10 24817755 24818062 -120771226 - AluSx SINE Alu -6 306 1 1553 182 0 52 chr10 24818299 24818413 -120770875 - AluJo SINE Alu -20 292 174 2914 77 8 0 chr10 24818413 24818765 -120770523 + THE1A LTR MaLR 1 355 0 1553 182 0 52 chr10 24818765 24818958 -120770330 - AluJo SINE Alu -138 174 1 525 340 44 6 chr10 24820052 24820281 -120769007 + MIR SINE MIR 4 237 -25 349 369 83 30 chr10 24820306 24820737 -120768551 + L2 LINE L2 2009 2462 -852 1192 186 68 79 chr10 24821378 24821744 -120767544 + MLT1A1 LTR MaLR 1 362 -3 1682 168 3 47 chr10 24822219 24822541 -120766747 - AluJb SINE Alu -4 308 1 1574 176 10 36 chr10 24822565 24822872 -120766416 - AluJo SINE Alu -13 299 1 209 250 36 83 chr10 24823268 24823331 -120765957 + L2 LINE L2 3193 3253 -19 1919 149 7 10 chr10 24823331 24823499 -120765789 - AluSx SINE Alu -11 301 133 2060 112 3 17 chr10 24823499 24823823 -120765465 - AluSc SINE Alu 0 309 1 1919 149 7 10 chr10 24823823 24823956 -120765332 - AluSx SINE Alu -179 133 1 209 250 36 83 chr10 24823956 24823976 -120765312 + L2 LINE L2 3253 3272 0 2093 89 17 3 chr10 24824697 24824988 -120764300 + AluSq SINE Alu 1 295 -18 273 312 25 64 chr10 24825227 24825384 -120763904 + MIR SINE MIR 112 262 0 719 210 12 42 chr10 24825500 24825667 -120763621 + FRAM SINE Alu 1 156 -20 1864 160 23 7 chr10 24825986 24826292 -120762996 + AluJo SINE Alu 1 311 -1 3028 171 23 37 chr10 24826579 24827000 -120762288 - Tigger5 DNA MER2_type 0 2323 1911 1649 122 191 7 chr10 24827000 24827304 -120761984 - MER46B DNA MER2_type -1 235 1 3028 171 23 37 chr10 24827304 24827483 -120761805 - Tigger5 DNA MER2_type -412 1911 1731 3147 130 16 36 chr10 24827493 24827537 -120761751 - L1PA16 LINE L1 0 6166 6123 1856 131 45 17 chr10 24827537 24827827 -120761461 + AluSx SINE Alu 1 298 -14 3147 130 16 36 chr10 24827827 24828283 -120761005 - L1PA16 LINE L1 -43 6123 5676 973 206 65 67 chr10 24828386 24828802 -120760486 - MER21A LTR ERV1 -422 441 1 1804 187 132 127 chr10 24828802 24829036 -120760252 + LTR8A LTR ERV1 42 273 -454 2083 117 0 4 chr10 24829036 24829337 -120759951 - AluSx SINE Alu 0 310 11 1804 187 132 127 chr10 24829337 24829784 -120759504 + LTR8A LTR ERV1 273 727 0 189 356 200 0 chr10 24829789 24829879 -120759409 - L2 LINE L2 -31 3241 3134 2090 152 18 3 chr10 24829908 24830243 -120759045 - LTR26B LTR ERV1 0 531 192 936 111 19 0 chr10 24830247 24830409 -120758879 + (TTTC)n Simple_repeat Simple_repeat 4 168 0 786 168 16 8 chr10 24830409 24830534 -120758754 - AluJb SINE Alu -52 260 135 1383 47 37 88 chr10 24830534 24830749 -120758539 - LTR26B LTR ERV1 -327 204 1 1975 137 6 51 chr10 24830801 24831115 -120758173 + AluSx SINE Alu 1 300 -12 3060 128 14 0 chr10 24831254 24831675 -120757613 + MSTA LTR MaLR 1 427 -1 1088 199 94 26 chr10 24831828 24832094 -120757194 - L1MB7 LINE L1 -19 6165 5882 783 207 0 21 chr10 24832738 24832878 -120756410 + AluJo SINE Alu 3 139 -173 1825 146 0 11 chr10 24832880 24833160 -120756128 + AluJo SINE Alu 11 287 -25 580 188 21 0 chr10 24833186 24833282 -120756006 + AluJ/FLAM SINE Alu 2 99 -213 886 161 0 19 chr10 24833282 24833437 -120755851 + AluJo/FRAM SINE Alu 161 312 0 1450 147 77 63 chr10 24833961 24834260 -120755028 + AluJb SINE Alu 1 303 -9 2296 90 0 3 chr10 24834355 24834654 -120754634 - AluSg SINE Alu -12 298 1 5652 72 15 0 chr10 24834826 24835507 -120753781 - LTR8 LTR ERV1 0 691 1 468 165 0 13 chr10 24835507 24835586 -120753702 - MSTB LTR MaLR -348 78 1 252 241 0 0 chr10 24835711 24835765 -120753523 + MLT1K LTR MaLR 532 585 -3 3508 150 45 20 chr10 24836031 24836617 -120752671 + LTR26E LTR ERV1 1 604 -18 1599 152 117 72 chr10 24836617 24837046 -120752242 + LTR7 LTR ERV1 1 448 -2 3508 150 45 20 chr10 24837046 24837064 -120752224 + LTR26E LTR ERV1 604 620 -2 225 296 28 0 chr10 24837232 24837303 -120751985 + MER5B DNA MER1_type 7 79 -99 180 0 0 0 chr10 24837331 24837351 -120751937 + (CG)n Simple_repeat Simple_repeat 2 21 0 * 345 24 0 0 chr10 24837350 24837392 -120751896 + (CA)n Simple_repeat Simple_repeat 1 42 0 1993 142 72 70 chr10 24837542 24837876 -120751412 + MER34C LTR ERV1 37 369 -216 2334 171 25 2 chr10 24837876 24838269 -120751019 - MER57A LTR ERV1 0 403 2 1993 142 72 70 chr10 24838269 24838290 -120750998 + MER34C LTR ERV1 369 388 -197 2172 124 0 3 chr10 24838290 24838597 -120750691 - AluSc SINE Alu -3 306 1 1993 142 72 70 chr10 24838597 24838683 -120750605 + MER34C LTR ERV1 388 480 -105 1409 187 41 41 chr10 24838679 24838973 -120750315 - MER50 LTR ERV1 -23 711 418 * 297 161 65 0 chr10 24839073 24839135 -120750153 + L1MB8 LINE L1 5225 5290 -856 839 196 8 0 chr10 24839146 24839279 -120750009 + AluJo SINE Alu 2 135 -177 1510 207 3 10 chr10 24839279 24839593 -120749695 + AluJb SINE Alu 1 312 0 1061 232 0 67 chr10 24839595 24839786 -120749502 + L1MB8 LINE L1 5300 5504 -674 1061 120 78 51 chr10 24839786 24840003 -120749285 + L1MB8 LINE L1 5945 6167 -11 1061 232 0 67 chr10 24840003 24840160 -120749128 + L1MB8 LINE L1 5504 5672 -506 2266 113 0 3 chr10 24840160 24840461 -120748827 - AluSx SINE Alu -12 300 1 1061 232 0 67 chr10 24840461 24840993 -120748295 + L1MB8 LINE L1 5672 6143 -35 2404 74 0 7 chr10 24840993 24841292 -120747996 - AluSq SINE Alu -16 297 1 1061 232 0 67 chr10 24841292 24841326 -120747962 + L1MB8 LINE L1 6143 6178 0 817 119 24 0 chr10 24841565 24841691 -120747597 - L1MA5A LINE L1 -4 6293 6165 1819 113 106 3 chr10 24841709 24841992 -120747296 - AluSx SINE Alu 0 312 1 2043 124 0 3 chr10 24842771 24843098 -120746190 - AluSx SINE Alu 0 326 1 2044 132 0 10 chr10 24843106 24843442 -120745846 - AluSx SINE Alu 0 333 1 809 257 126 5 chr10 24843485 24843699 -120745589 - MIR SINE MIR -1 261 22 1720 173 30 7 chr10 24843699 24843994 -120745294 - AluJo SINE Alu -6 306 5 2465 69 0 0 chr10 24844010 24844314 -120744974 - AluY SINE Alu -7 304 1 253 222 14 28 chr10 24845349 24845421 -120743867 + GA-rich Low_complexity Low_complexity 6 76 0 1648 156 3 63 chr10 24845836 24846151 -120743137 + AluJo SINE Alu 15 310 -2 2246 199 74 31 chr10 24846422 24846757 -120742531 - MER97a DNA MER1_type? -11 883 511 1841 116 48 24 chr10 24846757 24847050 -120742238 + AluSq SINE Alu 1 300 -13 2246 199 74 31 chr10 24847050 24847296 -120741992 - MER97a DNA MER1_type? -383 511 277 921 176 176 70 chr10 24847305 24847577 -120741711 + AluJo SINE Alu 8 308 -4 2184 109 0 32 chr10 24847595 24847906 -120741382 + AluSq SINE Alu 1 301 -12 558 259 119 13 chr10 24847906 24848142 -120741146 - MER97c DNA MER1_type? -809 281 21 1854 163 10 7 chr10 24848269 24848564 -120740724 - AluJo SINE Alu -11 301 6 1380 189 21 60 chr10 24848610 24848759 -120740529 + AluJo SINE Alu 1 135 -177 2239 115 3 0 chr10 24848759 24849055 -120740233 + AluSq SINE Alu 1 297 -16 1380 189 21 60 chr10 24849055 24849190 -120740098 + AluJo SINE Alu 135 274 -38 335 152 0 15 chr10 24849203 24849269 -120740019 + GA-rich Low_complexity Low_complexity 4 68 0 1431 157 0 0 chr10 24849281 24849498 -120739790 + AluJb SINE Alu 87 303 -9 2810 134 4 47 chr10 24849610 24850079 -120739209 + MER41B LTR ERV1 1 449 -186 1861 139 31 7 chr10 24850080 24850367 -120738921 + AluSx SINE Alu 1 294 -18 547 147 0 0 chr10 24850372 24850467 -120738821 + (GGGAA)n Simple_repeat Simple_repeat 3 97 0 204 289 0 26 chr10 24850577 24850653 -120738635 + MER5A DNA MER1_type 65 138 -51 2201 117 10 0 chr10 24850744 24851042 -120738246 + AluSg SINE Alu 1 301 -9 220 295 47 87 chr10 24851262 24851411 -120737877 + MER5A DNA MER1_type 47 189 0 367 284 55 24 chr10 24851420 24851547 -120737741 - MIR SINE MIR 0 262 132 1830 175 7 10 chr10 24851776 24852229 -120737059 + AluJo SINE Alu 1 452 0 300 283 42 58 chr10 24852946 24853066 -120736222 - MIR SINE MIR -142 120 3 2115 136 7 0 chr10 24853139 24853447 -120735841 + AluSg SINE Alu 1 310 0 1735 96 0 40 chr10 24854042 24854292 -120734996 + L1MA4A LINE L1 6045 6284 -19 520 358 118 0 chr10 24854431 24854727 -120734561 + L2 LINE L2 2520 2850 -464 2576 125 17 6 chr10 24854754 24855114 -120734174 - THE1B LTR MaLR 0 364 1 243 29 0 29 chr10 24855442 24855477 -120733811 + L1MA6 LINE L1 6114 6147 -153 1640 165 18 21 chr10 24855674 24855959 -120733329 + AluJo SINE Alu 1 284 -28 180 0 0 0 chr10 24856408 24856428 -120732860 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 1863 171 3 7 chr10 24856741 24857039 -120732249 - AluJo SINE Alu -15 297 1 261 119 0 0 chr10 24857328 24857370 -120731918 + (A)n Simple_repeat Simple_repeat 1 42 0 1878 123 98 0 chr10 24857455 24857716 -120731572 + AluSg SINE Alu 1 292 -18 240 35 0 0 chr10 24857716 24857745 -120731543 + (CA)n Simple_repeat Simple_repeat 2 30 0 1878 123 98 0 chr10 24857745 24857760 -120731528 + AluSg SINE Alu 292 304 -6 385 336 89 21 chr10 24857991 24858226 -120731062 + L2 LINE L2 2252 2502 -812 315 312 42 38 chr10 24858242 24858456 -120730832 + L2 LINE L2 2775 2986 -286 906 200 29 54 chr10 24858609 24858814 -120730474 - MLT1B LTR MaLR 0 390 191 441 138 0 0 chr10 24858821 24858901 -120730387 + (GA)n Simple_repeat Simple_repeat 1 80 0 1796 128 54 27 chr10 24858939 24859236 -120730052 - AluJo SINE Alu -7 305 1 682 136 79 102 chr10 24859239 24859306 -120729982 - MLT1B LTR MaLR -217 173 106 2399 89 3 0 chr10 24859306 24859608 -120729680 - AluSq SINE Alu -10 303 1 682 136 79 102 chr10 24859608 24859717 -120729571 - MLT1B LTR MaLR -284 106 1 330 256 184 8 chr10 24859718 24859843 -120729445 + L2 LINE L2 3167 3313 0 701 222 46 75 chr10 24859888 24860127 -120729161 - MIR SINE MIR -22 240 9 27 0 0 0 chr10 24860165 24860192 -120729096 + AT_rich Low_complexity Low_complexity 1 27 0 503 278 95 27 chr10 24860199 24860462 -120728826 - L2 LINE L2 -2 3311 3031 2255 79 0 30 chr10 24862172 24862475 -120726813 + AluSp SINE Alu 1 294 -19 2109 186 180 36 chr10 24862475 24863093 -120726195 - MER39 LTR ERV1 0 707 1 2566 162 34 134 chr10 24863093 24863239 -120726049 + L1MB7 LINE L1 5189 5348 -836 1410 196 85 0 chr10 24863239 24863520 -120725768 + AluJb SINE Alu 4 308 -4 2566 162 34 134 chr10 24863520 24863879 -120725409 + L1MB7 LINE L1 5348 5586 -598 1927 152 0 34 chr10 24863879 24864202 -120725086 - AluSx SINE Alu 0 312 1 2566 162 34 134 chr10 24864202 24864507 -120724781 + L1MB7 LINE L1 5586 5920 -264 2182 114 6 16 chr10 24864609 24864925 -120724363 + AluSq SINE Alu 1 313 0 442 92 0 103 chr10 24865023 24865047 -120724241 + MLT1A1 LTR MaLR 1 26 -339 1801 136 51 90 chr10 24865047 24865437 -120723851 + THE1C LTR MaLR 1 375 0 442 92 0 103 chr10 24865437 24865499 -120723789 + MLT1A1 LTR MaLR 26 78 -287 267 176 0 20 chr10 24865498 24865549 -120723739 + MSTA LTR MaLR 379 428 0 * 711 158 0 25 chr10 24865549 24865669 -120723619 + MLT1A1 LTR MaLR 20 136 -229 2263 218 98 73 chr10 24865676 24865957 -120723331 + MER21B LTR ERV1 1 273 -590 1685 180 21 0 chr10 24865957 24866240 -120723048 - AluJo SINE Alu -23 289 1 2263 218 98 73 chr10 24866240 24866415 -120722873 + MER21B LTR ERV1 273 442 -421 4673 66 2 0 chr10 24866415 24866973 -120722315 + L1PA5 LINE L1 5595 6153 -1 2263 218 98 73 chr10 24866973 24867327 -120721961 + MER21B LTR ERV1 442 833 -30 2172 122 23 0 chr10 24867328 24867655 -120721633 - AluSx SINE Alu 0 334 1 1182 185 69 0 chr10 24867668 24867884 -120721404 + MLT1A1 LTR MaLR 132 362 -3 180 0 0 0 chr10 24868169 24868189 -120721099 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1685 137 48 11 chr10 24868191 24868461 -120720827 - AluJo SINE Alu -21 291 12 180 0 0 0 chr10 24868474 24868494 -120720794 + (TTG)n Simple_repeat Simple_repeat 2 21 0 854 94 8 24 chr10 24868502 24868629 -120720659 - FRAM SINE Alu -30 146 22 430 289 78 32 chr10 24868839 24869209 -120720079 + L1MC4 LINE L1 7444 7830 -212 967 220 0 0 chr10 24869264 24869423 -120719865 + FAM SINE Alu 1 159 -16 811 143 9 0 chr10 24869527 24869639 -120719649 - AluJb SINE Alu -194 118 6 2410 143 11 3 chr10 24870759 24871122 -120718166 + MER47A DNA MER2_type 1 366 0 1722 171 0 24 chr10 24871493 24871791 -120717497 - AluJo SINE Alu -21 291 1 734 81 0 0 chr10 24872205 24872291 -120716997 + AluSp/q SINE Alu 199 284 -29 249 169 56 70 chr10 24872310 24872381 -120716907 + MER41A LTR ERV1 364 433 -121 22 56 0 0 chr10 24872381 24872417 -120716871 + AT_rich Low_complexity Low_complexity 1 36 0 3332 211 78 21 chr10 24872527 24872880 -120716408 - MER45B DNA AcHobo -240 800 469 2700 197 50 4 chr10 24872880 24873398 -120715890 - MER34 LTR ERV1 0 542 1 3332 211 78 21 chr10 24873398 24873798 -120715490 - MER45B DNA AcHobo -571 469 4 404 207 134 177 chr10 24874224 24874456 -120714832 + MIR SINE MIR 20 241 -21 180 0 0 0 chr10 24874607 24874627 -120714661 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 774 169 0 0 chr10 24874630 24874748 -120714540 - FLAM_C SINE Alu -15 118 1 944 150 0 0 chr10 24874988 24875121 -120714167 + AluSq/x SINE Alu 1 133 -179 246 32 0 0 chr10 24875121 24875152 -120714136 + (A)n Simple_repeat Simple_repeat 1 31 0 423 94 0 0 chr10 24875306 24875359 -120713929 - Alu SINE Alu -259 53 1 1089 286 26 52 chr10 24875406 24875871 -120713417 - HAL1 LINE L1 -1509 998 546 26 30 0 0 chr10 24875894 24875927 -120713361 + AT_rich Low_complexity Low_complexity 1 33 0 814 191 0 0 chr10 24875955 24876102 -120713186 - FRAM SINE Alu -32 144 1 1451 228 53 36 chr10 24876103 24876515 -120712773 - HAL1 LINE L1 -1952 555 137 783 206 0 0 chr10 24876532 24876658 -120712630 - FLAM_A SINE Alu -6 127 2 2323 119 0 0 chr10 24876816 24877128 -120712160 - AluSx SINE Alu 0 312 1 226 367 43 0 chr10 24877157 24877296 -120711992 + L2 LINE L2 2552 2696 -618 402 369 25 25 chr10 24877377 24877575 -120711713 + L2 LINE L2 2875 3072 -200 29 0 0 0 chr10 24877925 24877954 -120711334 + AT_rich Low_complexity Low_complexity 1 29 0 1808 161 0 27 chr10 24877973 24878272 -120711016 + AluJo SINE Alu 6 296 -16 1812 151 39 3 chr10 24878397 24878707 -120710581 - AluSx SINE Alu 0 320 1 38 0 0 0 chr10 24879666 24879704 -120709584 + AT_rich Low_complexity Low_complexity 1 38 0 1949 158 3 3 chr10 24880149 24880460 -120708828 - AluJo SINE Alu 0 312 2 1927 164 0 0 chr10 24881158 24881456 -120707832 + AluJo SINE Alu 1 298 -14 200 247 72 113 chr10 24881613 24881710 -120707578 + MIR SINE MIR 82 174 -88 260 135 0 19 chr10 24881772 24881824 -120707464 + (CAT)n Simple_repeat Simple_repeat 2 52 0 593 247 54 12 chr10 24882126 24882292 -120706996 + MLT1I LTR MaLR 237 409 0 887 208 110 114 chr10 24882383 24882691 -120706597 - AluJo SINE Alu -4 308 2 781 192 0 8 chr10 24883141 24883266 -120706022 - FLAM_C SINE Alu -9 124 1 291 114 0 0 chr10 24883340 24883384 -120705904 + (GGA)n Simple_repeat Simple_repeat 3 46 0 1391 50 0 6 chr10 24883386 24883567 -120705721 + (GAA)n Simple_repeat Simple_repeat 1 180 0 555 269 21 14 chr10 24883958 24884099 -120705189 + MIR SINE MIR 9 150 -112 1754 177 3 13 chr10 24884177 24884477 -120704811 - AluJo SINE Alu -15 297 1 2179 97 0 53 chr10 24885343 24885663 -120703625 - AluY SINE Alu -8 303 1 604 148 26 35 chr10 24885668 24885783 -120703505 - FRAM SINE Alu 0 40 1 342 289 103 13 chr10 24885795 24885951 -120703337 - L1ME4a LINE L1 -6 6115 5946 1725 194 0 0 chr10 24886402 24886696 -120702592 - AluJo SINE Alu -18 294 1 2060 140 3 0 chr10 24886885 24887185 -120702103 + AluSx SINE Alu 1 301 -11 723 220 119 0 chr10 24887798 24887966 -120701322 - MER5A DNA MER1_type 0 189 2 2253 123 0 0 chr10 24887972 24888280 -120701008 - AluSx SINE Alu -2 310 3 360 264 43 61 chr10 24888687 24888850 -120700438 - MIR SINE MIR -71 191 32 205 283 0 17 chr10 24888899 24888959 -120700329 - L2 LINE L2 -1339 1975 1917 1311 158 19 142 chr10 24889073 24889396 -120699892 + AluJb SINE Alu 1 283 -19 334 94 31 0 chr10 24890441 24890505 -120698783 + (TA)n Simple_repeat Simple_repeat 2 67 0 189 0 0 0 chr10 24890505 24890526 -120698762 + (GA)n Simple_repeat Simple_repeat 2 22 0 1526 192 0 11 chr10 24890526 24890807 -120698481 - AluJo SINE Alu -34 278 1 373 159 43 0 chr10 24891113 24891182 -120698106 + MIR SINE MIR 105 176 -86 816 155 9 0 chr10 24891207 24891323 -120697965 - FLAM_C SINE Alu -25 118 2 304 224 30 0 chr10 24891324 24891391 -120697897 + MIR SINE MIR 167 235 -27 2209 117 13 0 chr10 24891783 24892081 -120697207 - AluSx SINE Alu -10 302 1 232 293 47 28 chr10 24892442 24892548 -120696740 + MIR3 SINE MIR 92 199 -9 2563 63 0 0 chr10 24893144 24893444 -120695844 - AluY SINE Alu -11 300 1 2324 119 15 0 chr10 24894088 24894424 -120694864 - L1PA13 LINE L1 -14 6149 5809 2074 122 3 20 chr10 24894861 24895157 -120694131 - AluSg SINE Alu -19 291 1 26 0 0 0 chr10 24895167 24895193 -120694095 + AT_rich Low_complexity Low_complexity 1 26 0 243 0 0 0 chr10 24895193 24895220 -120694068 + (CA)n Simple_repeat Simple_repeat 2 28 0 2051 141 0 0 chr10 24895443 24895742 -120693546 - AluSx SINE Alu -13 299 1 2175 80 0 17 chr10 24895844 24896180 -120693108 - AluY SINE Alu 0 331 1 745 257 148 43 chr10 24896186 24896817 -120692471 - L1ME3 LINE L1 -295 5850 5158 1359 149 0 14 chr10 24896818 24897032 -120692256 + AluJb SINE Alu 1 211 -101 1584 17 0 0 chr10 24897072 24897249 -120692039 + AluY SINE Alu 127 303 -8 310 305 18 24 chr10 24897325 24897492 -120691796 - L1ME3 LINE L1 -1078 5051 4886 705 234 80 48 chr10 24897531 24897882 -120691406 - L1ME3 LINE L1 -4863 1256 895 954 124 29 0 chr10 24898300 24898437 -120690851 - AluJb SINE Alu -171 141 1 286 358 55 22 chr10 24898439 24898713 -120690575 - L1ME3 LINE L1 -5710 409 127 6491 32 0 1 chr10 24899290 24900006 -120689282 - L1PA3 LINE L1 0 6155 5441 37131 40 113 2 chr10 24900106 24905101 -120684187 - L1P1 LINE L1 -579 5576 12 228 167 21 0 chr10 24905240 24905288 -120684000 + (CATATA)n Simple_repeat Simple_repeat 2 50 0 2555 177 133 4 chr10 24905448 24905935 -120683353 + MER44D DNA MER2_type 1 605 0 5944 80 47 3 chr10 24906054 24906801 -120682487 - LTR17 LTR ERV1 0 780 1 2035 116 0 27 chr10 24906912 24907205 -120682083 + AluSg1 SINE Alu 5 289 -20 212 357 123 56 chr10 24907564 24907816 -120681472 - L2 LINE L2 -4 3268 3000 672 160 5 43 chr10 24907964 24908151 -120681137 + CT-rich Low_complexity Low_complexity 1 180 0 2020 143 0 3 chr10 24908154 24908461 -120680827 - AluJb SINE Alu -6 306 1 1196 211 23 0 chr10 24910202 24910420 -120678868 + MER58A DNA MER1_type 2 224 0 916 268 121 16 chr10 24910431 24910745 -120678543 - MLT1I LTR MaLR 0 409 63 2421 159 32 25 chr10 24910761 24911169 -120678119 + LTR57 LTR ERVL 1 411 0 357 213 13 27 chr10 24911224 24911299 -120677989 - Tigger2a DNA MER2_type 0 434 361 691 169 52 70 chr10 24911299 24911449 -120677839 - L1PA16 LINE L1 -4 6162 6014 975 135 0 0 chr10 24911449 24911619 -120677669 + (TTCC)n Simple_repeat Simple_repeat 4 173 0 691 169 52 70 chr10 24911619 24911640 -120677648 - L1PA16 LINE L1 -152 6014 5994 1799 172 3 17 chr10 24911640 24911936 -120677352 - AluJb SINE Alu -20 292 1 4718 146 55 12 chr10 24911937 24912902 -120676386 - L1PA16 LINE L1 -125 6041 5018 2397 123 11 24 chr10 24912902 24913283 -120676005 - Tigger2a DNA MER2_type -58 376 1 707 219 273 44 chr10 24913594 24913909 -120675379 - LTR16A LTR ERVL -1 449 63 * 3182 143 9 28 chr10 24913907 24914447 -120674841 - MER34B LTR ERV1 -33 532 3 1133 289 51 28 chr10 24914461 24914894 -120674394 - L2 LINE L2 -2313 1001 559 244 366 12 0 chr10 24914964 24915046 -120674242 + MIR3 SINE MIR 117 199 -9 218 298 97 8 chr10 24915493 24915617 -120673671 + L2 LINE L2 3162 3296 -17 1757 159 17 21 chr10 24915618 24915907 -120673381 - AluJo SINE Alu -24 288 1 357 250 80 18 chr10 24916644 24916756 -120672532 + MIR3 SINE MIR 74 192 -16 2692 124 16 56 chr10 24917045 24917490 -120671798 - MSTA LTR MaLR -1 427 1 1113 237 85 75 chr10 24917641 24917837 -120671451 - MER34 LTR ERV1 0 542 349 672 240 0 0 chr10 24917837 24917962 -120671326 - FLAM_C SINE Alu -8 125 1 1113 237 85 75 chr10 24917962 24918297 -120670991 - MER34 LTR ERV1 -193 349 6 243 88 0 0 chr10 24918363 24918397 -120670891 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 294 50 0 0 chr10 24919007 24919047 -120670241 + (CA)n Simple_repeat Simple_repeat 1 40 0 4445 115 63 72 chr10 24919086 24919685 -120669603 - L1MC1 LINE L1 -86 6247 5657 1492 148 155 30 chr10 24919685 24919949 -120669339 + AluJb SINE Alu 1 297 -5 4445 115 63 72 chr10 24919949 24920178 -120669110 - L1MC1 LINE L1 -676 5657 5427 2324 97 0 0 chr10 24920261 24920551 -120668737 + AluSg SINE Alu 1 290 -20 399 259 0 0 chr10 24920932 24921017 -120668271 - MIR SINE MIR -148 114 30 367 280 112 85 chr10 24921120 24921569 -120667719 + MLT1L LTR MaLR 75 560 -55 920 166 0 13 chr10 24922143 24922300 -120666988 + FRAM SINE Alu 1 155 -21 21 0 0 0 chr10 24922997 24923018 -120666270 + AT_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr10 24923506 24923534 -120665754 + AT_rich Low_complexity Low_complexity 1 28 0 506 169 0 0 chr10 24924750 24924833 -120664455 + MLT1K LTR MaLR 506 588 0 272 264 41 66 chr10 24925569 24925690 -120663598 + L2 LINE L2 2141 2258 -1056 1267 208 4 12 chr10 24925692 24925947 -120663341 - AluJb SINE Alu -5 307 55 523 92 69 0 chr10 24925947 24926034 -120663254 + L1MA1 LINE L1 6106 6198 -104 825 168 7 13 chr10 24926139 24926294 -120662994 + L1MA1 LINE L1 6149 6302 0 366 127 63 16 chr10 24926310 24926373 -120662915 - AluJb SINE Alu -236 66 1 321 350 148 27 chr10 24926373 24926832 -120662456 + L2 LINE L2 2253 2824 -448 1776 156 0 49 chr10 24926832 24926971 -120662317 + AluJo SINE Alu 1 145 -167 2228 100 0 0 chr10 24926971 24927306 -120661982 + AluY SINE Alu 1 311 0 1776 156 0 49 chr10 24927306 24927494 -120661794 + AluJo SINE Alu 145 312 0 321 350 148 27 chr10 24927494 24927749 -120661539 + L2 LINE L2 2824 3047 -225 800 134 14 42 chr10 24928486 24928628 -120660660 - FLAM_C SINE Alu -1 142 5 781 259 102 13 chr10 24929839 24930075 -120659213 - MIR SINE MIR 0 262 6 228 360 54 37 chr10 24930605 24930902 -120658386 + L2 LINE L2 2065 2366 -948 23 54 0 0 chr10 24930991 24931028 -120658260 + AT_rich Low_complexity Low_complexity 1 37 0 415 255 111 74 chr10 24931055 24931271 -120658017 - MIR SINE MIR -36 226 3 330 262 108 100 chr10 24931444 24931723 -120657565 - LTR33 LTR ERVL -97 424 144 284 247 59 24 chr10 24935288 24935373 -120653915 + MIR SINE MIR 35 122 -86 1603 143 87 11 chr10 24935861 24936126 -120653162 - AluJb SINE Alu -27 285 1 23 54 0 0 chr10 24936129 24936166 -120653122 + AT_rich Low_complexity Low_complexity 1 37 0 1099 266 106 56 chr10 24936168 24936774 -120652514 - HAL1 LINE L1 -13 2494 1859 28 0 0 0 chr10 24936839 24936867 -120652421 + AT_rich Low_complexity Low_complexity 1 28 0 263 257 69 62 chr10 24937026 24937170 -120652118 - HAL1 LINE L1 -651 1856 1712 2459 105 63 0 chr10 24937176 24937510 -120651778 + THE1A LTR MaLR 1 355 0 9267 135 19 113 chr10 24937510 24939254 -120650034 + THE1A-int LTR MaLR 1 1580 0 2709 81 32 3 chr10 24939254 24939599 -120649689 + THE1A LTR MaLR 1 355 0 2492 244 96 42 chr10 24939605 24940144 -120649144 - HAL1 LINE L1 -805 1702 1193 2442 93 0 0 chr10 24940144 24940455 -120648833 - AluY SINE Alu 0 311 1 2492 244 96 42 chr10 24940455 24940883 -120648405 - HAL1 LINE L1 -1314 1193 683 1626 191 0 27 chr10 24941000 24941298 -120647990 - AluJb SINE Alu -22 290 1 471 297 91 32 chr10 24942356 24942412 -120646876 + MIR SINE MIR 25 76 -186 2217 118 8 87 chr10 24942412 24942778 -120646510 + MER1B DNA MER1_type 1 337 0 471 297 91 32 chr10 24942778 24942940 -120646348 + MIR SINE MIR 76 256 -6 31 44 0 0 chr10 24942971 24943016 -120646272 + AT_rich Low_complexity Low_complexity 1 45 0 2218 113 0 22 chr10 24943626 24943944 -120645344 - AluSq SINE Alu -2 311 1 1229 62 0 6 chr10 24944353 24944513 -120644775 + AluY SINE Alu 139 297 -14 455 94 0 0 chr10 24944546 24944610 -120644678 + L1MA9 LINE L1 6087 6150 -162 345 109 0 0 chr10 24944764 24944819 -120644469 + (TG)n Simple_repeat Simple_repeat 2 56 0 247 317 195 6 chr10 24945122 24945286 -120644002 + MIR SINE MIR 3 197 -65 27 87 0 0 chr10 24945286 24945355 -120643933 + AT_rich Low_complexity Low_complexity 1 69 0 2099 162 58 31 chr10 24945474 24946002 -120643286 + MLT2A2 LTR ERVL 1 554 0 22 56 0 0 chr10 24946101 24946137 -120643151 + AT_rich Low_complexity Low_complexity 1 36 0 456 305 63 47 chr10 24946547 24946959 -120642329 - L1MC4a LINE L1 -395 5726 5416 1827 170 0 0 chr10 24946959 24947276 -120642012 - AluJo SINE Alu 0 317 1 456 305 63 47 chr10 24947276 24947312 -120641976 - L1MC4a LINE L1 -705 5416 5382 1528 195 9 46 chr10 24947641 24947989 -120641299 - L1MB8 LINE L1 -3 6175 5841 342 251 82 86 chr10 24947964 24948207 -120641081 - L1MB8 LINE L1 -1095 5051 4810 * 867 181 0 0 chr10 24948256 24948400 -120640888 - FRAM SINE Alu -32 144 1 444 291 26 62 chr10 24948401 24948573 -120640715 - L1MB8 LINE L1 -1396 4750 4585 2102 133 0 0 chr10 24948573 24948886 -120640402 - AluSx SINE Alu 0 313 1 444 291 26 62 chr10 24948886 24948939 -120640349 - L1MB8 LINE L1 -1561 4585 4532 1882 155 14 0 chr10 24949475 24949753 -120639535 - AluJo SINE Alu -30 282 1 629 272 87 5 chr10 24951481 24951665 -120637623 + MIR SINE MIR 32 230 -32 1562 176 0 65 chr10 24952521 24952827 -120636461 - AluJo SINE Alu -6 306 21 210 244 0 0 chr10 24952959 24953000 -120636288 + L2 LINE L2 3226 3266 -6 1807 162 81 8 chr10 24953658 24954053 -120635235 - L1MD1 LINE L1 0 6636 6213 932 167 7 0 chr10 24954053 24954203 -120635085 + FRAM SINE Alu 1 149 -27 7789 225 47 27 chr10 24954237 24955665 -120633623 - L1MD1 LINE L1 -458 6178 4780 1704 184 0 7 chr10 24955665 24955947 -120633341 - AluSx SINE Alu -32 280 1 7789 225 47 27 chr10 24955947 24956401 -120632887 - L1MD1 LINE L1 -1856 4780 4336 2139 134 3 0 chr10 24956401 24956700 -120632588 + AluSx SINE Alu 1 300 -12 7789 225 47 27 chr10 24956700 24958159 -120631129 - L1MD1 LINE L1 -2300 4336 2769 1776 148 64 15 chr10 24958173 24958579 -120630709 - L1MD1 LINE L1 -3890 2650 2225 2641 221 63 3 chr10 24958581 24959196 -120630092 + MER82 DNA MER2_type 1 652 -1 4195 208 75 24 chr10 24959205 24959715 -120629573 - L1MD1 LINE L1 -4477 2063 1580 252 0 0 0 chr10 24959715 24959743 -120629545 + (TA)n Simple_repeat Simple_repeat 2 29 0 4195 208 75 24 chr10 24959743 24960503 -120628785 - L1MD1 LINE L1 -4960 1580 656 201 162 0 0 chr10 24962777 24962814 -120626474 + A-rich Low_complexity Low_complexity 1 37 0 1565 185 0 73 chr10 24962865 24963179 -120626109 - AluJo SINE Alu -21 291 1 2373 74 0 26 chr10 24963765 24964077 -120625211 + AluY SINE Alu 1 304 -7 1866 199 8 8 chr10 24964379 24964755 -120624533 + L1M3e LINE L1 466 841 -6648 2493 259 19 34 chr10 24964953 24965874 -120623414 + L1M3e LINE L1 1885 2791 -4774 302 277 66 36 chr10 24965904 24966041 -120623247 + L1ME4a LINE L1 5366 5506 -615 712 312 23 0 chr10 24966053 24966271 -120623017 + MIR SINE MIR 33 255 -7 578 271 74 11 chr10 24966308 24966592 -120622696 + L1ME4a LINE L1 5527 5828 -293 924 42 0 0 chr10 24966613 24966731 -120622557 - L1PA4 LINE L1 -3 6152 6035 22 0 0 0 chr10 24966823 24966845 -120622443 + AT_rich Low_complexity Low_complexity 1 22 0 238 171 0 0 chr10 24967041 24967082 -120622206 - MLT1B LTR MaLR 0 390 350 829 190 13 25 chr10 24967108 24967266 -120622022 - FRAM SINE Alu -10 156 1 1530 168 21 4 chr10 24967789 24968069 -120621219 + MLT1B LTR MaLR 1 285 -105 1059 328 133 24 chr10 24968766 24969752 -120619536 - L2 LINE L2 -2 3270 2182 725 71 0 0 chr10 24969921 24970019 -120619269 - L1PB3 LINE L1 -1 6153 6056 759 240 76 26 chr10 24970381 24970897 -120618391 - MLT2F LTR ERVL -4 659 80 385 253 34 68 chr10 24972523 24972669 -120616619 - MLT1K LTR MaLR -1 587 447 297 0 0 0 chr10 24972848 24972881 -120616407 + (CA)n Simple_repeat Simple_repeat 1 33 0 846 263 60 101 chr10 24973107 24973709 -120615579 + MER77 LTR ERV1 24 601 -4 183 216 27 0 chr10 24974242 24974279 -120615009 + L2 LINE L2 3191 3228 -85 1801 233 69 67 chr10 24974281 24974934 -120614354 - MER76 LTR ERV -34 654 1 273 273 13 26 chr10 24974934 24975011 -120614277 + L2 LINE L2 3181 3256 -16 15401 63 17 1 chr10 24977825 24980662 -120608626 - L1PA6 LINE L1 0 6154 3288 32120 41 1 2 chr10 24980683 24985658 -120603630 - L1PA4 LINE L1 0 6155 1218 13125 132 10 19 chr10 24985785 24988036 -120601252 - L1PA6 LINE L1 -3905 2241 13 1769 149 14 0 chr10 24988293 24988582 -120600706 + L1PB4 LINE L1 5861 6153 -3 516 278 72 61 chr10 24989315 24989721 -120599567 - L1MC5 LINE L1 -37 7924 7507 2323 107 3 0 chr10 24989721 24990031 -120599257 - AluSp SINE Alu -2 311 1 516 278 72 61 chr10 24990031 24990231 -120599057 - L1MC5 LINE L1 -454 7507 7311 2683 36 0 0 chr10 24990235 24990542 -120598746 - AluY SINE Alu -4 307 1 216 310 0 0 chr10 24991629 24991687 -120597601 - MIR SINE MIR -139 123 66 2026 149 3 13 chr10 24991861 24992176 -120597112 - AluSx SINE Alu 0 312 1 1840 166 3 28 chr10 24992346 24992666 -120596622 + AluJb SINE Alu 1 312 0 890 137 0 30 chr10 24993358 24993489 -120595799 - FLAM_C SINE Alu -16 127 1 240 264 25 41 chr10 24994710 24994831 -120594457 + LTR67 LTR ERVL 428 546 -11 1769 160 19 41 chr10 24996322 24996640 -120592648 - AluJo SINE Alu -1 311 1 1891 158 3 13 chr10 24996949 24997247 -120592041 + AluJo SINE Alu 6 300 -12 476 263 56 25 chr10 24997433 24997593 -120591695 - MIR SINE MIR -1 261 97 865 165 0 0 chr10 24998258 24998391 -120590897 - FLAM_C SINE Alu 0 133 1 272 322 68 0 chr10 24998494 24998640 -120590648 - MER103 DNA DNA -8 158 3 2070 130 0 13 chr10 24999134 24999441 -120589847 - AluSx SINE Alu -9 303 1 1563 220 54 2 chr10 25000758 25001163 -120588125 - LTR16A LTR ERVL -1 449 24 1480 194 7 44 chr10 25001702 25001995 -120587293 - AluJo SINE Alu -30 282 1 770 228 72 5 chr10 25002054 25002247 -120587041 + MIR SINE MIR 47 252 -10 419 324 118 15 chr10 25002341 25002545 -120586743 - MIR SINE MIR -15 247 23 1471 67 5 0 chr10 25002593 25002787 -120586501 - L1PA7 LINE L1 0 6154 5960 3572 118 5 5 chr10 25004244 25004796 -120584492 - L1PA14 LINE L1 -1 6160 5609 223 133 17 17 chr10 25005907 25005967 -120583321 + (TA)n Simple_repeat Simple_repeat 1 60 0 332 291 82 72 chr10 25006331 25006650 -120582638 + L1ME3A LINE L1 5849 6170 0 2220 114 3 0 chr10 25006717 25007016 -120582272 - AluSx SINE Alu -12 300 1 358 256 0 0 chr10 25007147 25007225 -120582063 - MIR SINE MIR -17 245 168 1772 167 21 15 chr10 25007237 25007573 -120581715 - MER2 DNA MER2_type 0 345 8 272 270 183 22 chr10 25007818 25007955 -120581333 - L2 LINE L2 0 3272 3114 200 385 28 0 chr10 25008410 25008519 -120580769 + L2 LINE L2 3160 3271 -42 2094 135 0 0 chr10 25009506 25009803 -120579485 + AluSx SINE Alu 1 297 -15 292 189 0 40 chr10 25010144 25010218 -120579070 - Charlie7 DNA MER1_type -2507 105 35 1671 170 3 10 chr10 25010746 25011034 -120578254 - AluJo SINE Alu -26 286 1 697 221 25 65 chr10 25011409 25011555 -120577733 + MIR SINE MIR 16 153 -109 818 176 0 15 chr10 25011555 25011686 -120577602 + FLAM_C SINE Alu 1 129 -4 697 221 25 65 chr10 25011686 25011738 -120577550 + MIR SINE MIR 153 206 -56 216 274 16 16 chr10 25011885 25011947 -120577341 + L2 LINE L2 3155 3216 -56 * 539 208 39 15 chr10 25011943 25012073 -120577215 - MIR SINE MIR -91 171 39 439 251 86 23 chr10 25012264 25012439 -120576849 - MIR SINE MIR -57 205 20 27 0 0 0 chr10 25012754 25012781 -120576507 + AT_rich Low_complexity Low_complexity 1 27 0 2335 72 13 0 chr10 25013835 25014141 -120575147 + AluY SINE Alu 1 310 -1 284 231 0 0 chr10 25014207 25014259 -120575029 - MER5B DNA MER1_type -124 54 3 1904 142 61 17 chr10 25014637 25014996 -120574292 + THE1C LTR MaLR 1 375 0 2070 145 0 3 chr10 25015102 25015406 -120573882 + AluSx SINE Alu 1 303 -9 286 291 126 28 chr10 25016254 25016612 -120572676 + L1ME LINE L1 3493 3885 -2261 2088 120 10 0 chr10 25016993 25017285 -120572003 + AluSx SINE Alu 1 295 -17 334 351 18 7 chr10 25017345 25017630 -120571658 + L1ME LINE L1 4522 4809 -1337 38 0 0 0 chr10 25017991 25018029 -120571259 + AT_rich Low_complexity Low_complexity 1 38 0 695 228 14 7 chr10 25018079 25018224 -120571064 - FRAM SINE Alu -30 146 1 379 295 110 28 chr10 25018269 25018669 -120570619 + L1ME LINE L1 5319 5751 -370 329 181 0 110 chr10 25018951 25019078 -120570210 + L1M4 LINE L1 5195 5307 -839 4905 244 58 54 chr10 25019107 25020937 -120568351 + L1M4 LINE L1 17 1838 -4806 2189 129 0 0 chr10 25020937 25021232 -120568056 + AluSg SINE Alu 1 295 -15 4905 244 58 54 chr10 25021232 25021570 -120567718 + L1M4 LINE L1 1838 2173 -4471 1996 161 0 0 chr10 25021570 25021869 -120567419 - AluSx SINE Alu -13 299 1 4905 244 58 54 chr10 25021869 25022100 -120567188 + L1M4 LINE L1 2173 2402 -4242 4563 138 8 25 chr10 25022100 25022904 -120566384 - L1MA6 LINE L1 0 6300 5511 4905 244 58 54 chr10 25022904 25023793 -120565495 + L1M4 LINE L1 2402 3331 -3313 855 75 8 0 chr10 25023867 25023987 -120565301 + L1PB2 LINE L1 6028 6148 -3 281 135 19 0 chr10 25024063 25024115 -120565173 + C-rich Low_complexity Low_complexity 3 55 0 2060 120 0 0 chr10 25024120 25024395 -120564893 - AluSx SINE Alu -37 275 1 712 296 104 27 chr10 25024396 25024846 -120564442 - L1MEc LINE L1 -3200 3340 2856 336 267 10 0 chr10 25024989 25025090 -120564198 - L1MC4 LINE L1 -13 8029 7928 240 295 0 0 chr10 25025123 25025184 -120564104 + A-rich Low_complexity Low_complexity 3 63 0 239 226 113 67 chr10 25025260 25025455 -120563833 - L1MEc LINE L1 -3906 2642 2431 2091 121 20 3 chr10 25025537 25025834 -120563454 + AluSx SINE Alu 1 302 -10 304 305 43 51 chr10 25025930 25026186 -120563102 - L1MEc LINE L1 -5597 933 680 237 175 0 0 chr10 25026947 25026987 -120562301 + MIR SINE MIR 77 116 -146 871 245 14 92 chr10 25027241 25027534 -120561754 - MER102b DNA MER1_type -1091 337 75 2036 147 0 6 chr10 25027534 25027846 -120561442 + AluSx SINE Alu 1 310 -2 871 245 14 92 chr10 25027846 25027911 -120561377 - MER102b DNA MER1_type -1353 75 7 1429 215 57 16 chr10 25028862 25029248 -120560040 - MLT1C LTR MaLR -1 466 65 1020 175 0 27 chr10 25029254 25029437 -120559851 + Tigger4(Zombi) DNA MER2_type 1 178 -2553 12460 122 35 15 chr10 25029442 25031528 -120557760 + Tigger4(Zombi) DNA MER2_type 568 2694 -37 240 123 88 35 chr10 25031529 25031586 -120557702 - MLT1C LTR MaLR -407 60 1 256 200 33 78 chr10 25031757 25031847 -120557441 - MIR3 SINE MIR -4 204 119 24 67 0 0 chr10 25031959 25032004 -120557284 + AT_rich Low_complexity Low_complexity 1 45 0 1328 253 58 20 chr10 25032577 25032817 -120556471 + L1MC4 LINE L1 7437 7666 -376 2048 134 0 0 chr10 25032817 25033109 -120556179 - AluJb SINE Alu -19 293 2 1328 253 58 20 chr10 25033109 25033314 -120555974 + L1MC4 LINE L1 7666 7899 -143 307 309 133 39 chr10 25033444 25033700 -120555588 - L1M4 LINE L1 -1571 4575 4296 423 296 79 54 chr10 25033775 25033895 -120555393 - L1M4 LINE L1 -1921 4225 4109 467 110 44 11 chr10 25033895 25033986 -120555302 - L1MA5A LINE L1 -5 6292 6199 423 296 79 54 chr10 25033986 25034460 -120554828 - L1M4 LINE L1 -2037 4109 3616 1786 133 4 0 chr10 25034938 25035194 -120554094 + AluSg SINE Alu 38 294 -16 27 62 0 0 chr10 25035257 25035305 -120553983 + AT_rich Low_complexity Low_complexity 1 48 0 287 301 75 23 chr10 25035604 25035777 -120553511 - L1MC/D LINE L1 -1933 5875 5694 243 288 0 14 chr10 25035800 25035873 -120553415 - LTR33A LTR ERVL 0 523 452 1433 320 17 10 chr10 25036673 25037266 -120552022 - ERVL LTR ERVL -382 5382 4786 482 286 57 21 chr10 25037397 25037589 -120551699 - ERVL LTR ERVL -1161 4603 4405 1718 173 36 19 chr10 25038247 25038606 -120550682 - MLT1A1 LTR MaLR 0 365 1 207 186 0 0 chr10 25039047 25039090 -120550198 + (CATATA)n Simple_repeat Simple_repeat 1 43 0 31 0 0 0 chr10 25039148 25039179 -120550109 + AT_rich Low_complexity Low_complexity 1 31 0 1827 78 0 12 chr10 25040474 25040717 -120548571 + AluY SINE Alu 72 311 0 275 291 127 37 chr10 25040781 25040915 -120548373 - MIR3 SINE MIR -38 170 25 351 235 20 20 chr10 25041823 25041921 -120547367 + MER3 DNA MER1_type 5 102 -107 1658 199 3 16 chr10 25041933 25042240 -120547048 + AluJb SINE Alu 1 303 -9 2687 129 65 17 chr10 25042244 25042334 -120546954 + L1MA3 LINE L1 5760 5844 -461 1813 148 75 31 chr10 25042334 25042693 -120546595 + THE1C LTR MaLR 1 375 0 2687 129 65 17 chr10 25042693 25043123 -120546165 + L1MA3 LINE L1 5844 6305 0 390 134 85 0 chr10 25043143 25043225 -120546063 + MER3 DNA MER1_type 104 192 -17 293 327 200 32 chr10 25043898 25044424 -120544864 - L2 LINE L2 -2441 873 260 219 316 163 0 chr10 25046710 25046808 -120542480 + L2 LINE L2 3155 3268 -4 3190 144 61 15 chr10 25047507 25048096 -120541192 + Ricksha DNA DNA 9 624 -1422 802 119 0 30 chr10 25048101 25048235 -120541053 + Ricksha DNA DNA 1056 1185 -861 1787 144 0 0 chr10 25048355 25048612 -120540676 + AluSq SINE Alu 1 257 -56 314 258 197 1 chr10 25048833 25049141 -120540147 + LTR16A LTR ERVL 52 450 0 2077 153 7 0 chr10 25049526 25049834 -120539454 - AluSx SINE Alu 0 312 3 388 333 81 52 chr10 25050225 25050317 -120538971 + L1MEd LINE L1 601 689 -1801 200 125 25 0 chr10 25050317 25050357 -120538931 + A-rich Low_complexity Low_complexity 3 43 0 388 333 81 52 chr10 25050357 25050947 -120538341 + L1MEd LINE L1 689 1551 -939 1770 142 68 4 chr10 25050974 25051255 -120538033 + AluSx SINE Alu 13 311 -1 392 267 184 26 chr10 25051825 25052517 -120536771 + L1ME3 LINE L1 2872 3672 -2457 365 204 23 11 chr10 25052639 25052727 -120536561 - MER74A LTR ERVL 0 558 470 723 137 8 0 chr10 25052751 25052868 -120536420 - MER74A LTR ERVL -440 118 1 336 268 109 22 chr10 25052874 25053012 -120536276 + HsTC2a DNA Tc2 66 215 -529 341 280 156 32 chr10 25053076 25053294 -120535994 + L1ME3 LINE L1 4999 5243 -886 429 238 82 105 chr10 25053321 25053469 -120535819 + L1ME3 LINE L1 5315 5465 -680 1788 150 7 31 chr10 25053469 25053762 -120535526 - AluJo SINE Alu -22 290 5 429 238 82 105 chr10 25053762 25053928 -120535360 + L1ME3 LINE L1 5465 5622 -523 969 244 90 18 chr10 25053999 25054331 -120534957 - LTR16B LTR ERVL -2 462 107 314 311 61 0 chr10 25054438 25054570 -120534718 + L1ME3 LINE L1 5725 5864 -281 40725 52 4 3 chr10 25054646 25060792 -120528496 - L1PA4 LINE L1 0 6155 1 24 85 0 0 chr10 25061365 25061424 -120527864 + AT_rich Low_complexity Low_complexity 1 59 0 28 0 0 0 chr10 25062260 25062288 -120527000 + AT_rich Low_complexity Low_complexity 1 28 0 1205 269 99 54 chr10 25062377 25063299 -120525989 - HAL1 LINE L1 -112 2395 1433 23 0 0 0 chr10 25063299 25063322 -120525966 + AT_rich Low_complexity Low_complexity 1 23 0 573 286 83 67 chr10 25063665 25064113 -120525175 - HAL1 LINE L1 -1504 1003 549 1946 251 64 16 chr10 25064126 25064764 -120524524 - L1ME1 LINE L1 -18 6217 5549 359 210 59 8 chr10 25064774 25064893 -120524395 - L1ME1 LINE L1 -1433 4782 4658 5391 265 109 44 chr10 25065042 25066391 -120522897 + L1MEc LINE L1 35 1295 -4920 2337 80 0 7 chr10 25066391 25066690 -120522598 + AluY SINE Alu 1 297 -14 5391 265 109 44 chr10 25066690 25066902 -120522386 + L1MEc LINE L1 1295 1492 -4723 1529 184 9 57 chr10 25066902 25067218 -120522070 + AluJo SINE Alu 12 312 0 5391 265 109 44 chr10 25067218 25067819 -120521469 + L1MEc LINE L1 1492 2053 -4162 2358 121 49 0 chr10 25067819 25068184 -120521104 - L1PA16 LINE L1 -9 6157 5775 5391 265 109 44 chr10 25068184 25068359 -120520929 + L1MEc LINE L1 2053 2215 -4000 7329 29 17 1 chr10 25068359 25069667 -120519621 + L1PA3 LINE L1 4830 6152 -3 5391 265 109 44 chr10 25069667 25071596 -120517692 + L1MEc LINE L1 2215 4584 -1631 338 44 0 0 chr10 25071714 25071759 -120517529 + L1PA16 LINE L1 6112 6156 -10 725 273 74 0 chr10 25071775 25072086 -120517202 - L1ME1 LINE L1 -4041 2355 2022 285 75 0 0 chr10 25073087 25073127 -120516161 + (CA)n Simple_repeat Simple_repeat 1 40 0 2049 147 46 0 chr10 25073133 25073481 -120515807 - MER47A DNA MER2_type 0 366 3 1678 177 49 57 chr10 25073558 25073926 -120515362 - MLT1A1 LTR MaLR 0 365 1 1116 205 77 48 chr10 25073944 25073985 -120515303 + MER76 LTR ERV 1 39 -649 2242 82 0 7 chr10 25073985 25074277 -120515011 - AluY SINE Alu -21 290 1 1116 205 77 48 chr10 25074277 25074797 -120514491 + MER76 LTR ERV 39 667 -21 2336 71 0 14 chr10 25075559 25075854 -120513434 + AluY SINE Alu 10 300 -11 252 231 0 0 chr10 25079296 25079374 -120509914 + (TA)n Simple_repeat Simple_repeat 1 78 0 480 35 0 0 chr10 25079775 25079833 -120509455 + (TG)n Simple_repeat Simple_repeat 1 58 0 234 245 20 0 chr10 25080281 25080330 -120508958 + polypyrimidine Low_complexity Low_complexity 1 50 0 230 244 0 26 chr10 25080344 25080422 -120508866 + (TATATG)n Simple_repeat Simple_repeat 2 77 0 465 300 93 20 chr10 25080502 25080652 -120508636 - L2 LINE L2 -4 3268 3108 229 333 43 26 chr10 25084624 25084741 -120504547 - L2 LINE L2 -1 3271 3153 308 273 91 0 chr10 25084867 25084977 -120504311 + L2 LINE L2 3153 3272 0 1855 155 7 30 chr10 25085682 25085985 -120503303 + AluJb SINE Alu 1 296 -16 291 212 106 47 chr10 25086693 25086778 -120502510 - MIR3 SINE MIR -35 173 84 1015 187 4 3 chr10 25086881 25087118 -120502170 - AluJb SINE Alu -14 298 2 316 233 110 7 chr10 25087400 25087513 -120501775 - MIR3 SINE MIR -2 206 78 253 327 19 28 chr10 25087608 25087715 -120501573 + MIR SINE MIR 22 127 -135 940 199 0 0 chr10 25087716 25087882 -120501406 - FRAM SINE Alu 0 166 1 407 288 18 68 chr10 25087906 25088069 -120501219 + L2 LINE L2 3159 3313 0 1443 314 70 10 chr10 25088211 25089110 -120500178 + L2 LINE L2 2360 3313 0 418 293 16 0 chr10 25089106 25089229 -120500059 + MIR SINE MIR 138 262 0 * 387 0 0 0 chr10 25090760 25090803 -120498485 + (CA)n Simple_repeat Simple_repeat 2 44 0 23 54 0 0 chr10 25090899 25090936 -120498352 + AT_rich Low_complexity Low_complexity 1 37 0 1198 60 7 0 chr10 25090938 25091087 -120498201 - AluY SINE Alu -129 182 33 434 262 105 47 chr10 25091588 25091760 -120497528 + MER63A DNA MER1_type 29 210 0 206 214 24 0 chr10 25091800 25091842 -120497446 + CT-rich Low_complexity Low_complexity 3 45 0 502 237 68 96 chr10 25091876 25092095 -120497193 - MER58C DNA MER1_type -2 213 1 487 223 18 12 chr10 25092140 25092306 -120496982 + (TA)n Simple_repeat Simple_repeat 1 167 0 5828 195 49 25 chr10 25092368 25094853 -120494435 - L1MB7 LINE L1 0 6184 3641 1579 149 67 0 chr10 25095550 25095832 -120493456 + L1PB4 LINE L1 5854 6154 -2 1998 146 44 39 chr10 25096064 25096426 -120492862 - THE1B LTR MaLR 0 364 1 317 325 32 32 chr10 25096474 25096631 -120492657 - MIR3 SINE MIR -49 159 3 208 304 215 18 chr10 25096663 25096968 -120492320 - L2 LINE L2 -338 2975 2615 1744 180 0 16 chr10 25097339 25097650 -120491638 + AluJo SINE Alu 5 310 -2 234 286 39 26 chr10 25097849 25097926 -120491362 - MIR SINE MIR -108 154 77 240 244 24 12 chr10 25098141 25098223 -120491065 + (TGAA)n Simple_repeat Simple_repeat 1 83 0 1016 174 42 46 chr10 25099272 25099513 -120489775 + MLT1D LTR MaLR 6 245 -260 478 179 120 0 chr10 25099578 25099695 -120489593 + MLT1D LTR MaLR 370 500 -5 408 333 94 44 chr10 25101944 25102349 -120486939 + L2 LINE L2 2209 2633 -681 456 238 21 28 chr10 25102355 25102498 -120486790 - LTR16A1 LTR ERVL 0 457 316 210 224 105 79 chr10 25102608 25102684 -120486604 + L2 LINE L2 2898 2975 -338 1935 166 15 100 chr10 25102791 25103272 -120486016 - LTR47B LTR ERVL 0 443 4 23 0 0 0 chr10 25103800 25103823 -120485465 + AT_rich Low_complexity Low_complexity 1 23 0 342 282 19 0 chr10 25105421 25105524 -120483764 - MIR SINE MIR 0 262 158 495 108 0 36 chr10 25106191 25106274 -120483014 - MADE1 DNA Mariner 0 80 1 328 130 29 0 chr10 25106915 25106984 -120482304 + GA-rich Low_complexity Low_complexity 1 71 0 2720 147 18 74 chr10 25107074 25107394 -120481894 + L1MB5 LINE L1 5578 5914 -260 1886 162 0 3 chr10 25107394 25107716 -120481572 + AluJo SINE Alu 3 312 0 2720 147 18 74 chr10 25107716 25107746 -120481542 + L1MB5 LINE L1 5914 5944 -230 2046 95 15 4 chr10 25107746 25108019 -120481269 + AluSc SINE Alu 17 292 -17 2720 147 18 74 chr10 25108019 25108291 -120480997 + L1MB5 LINE L1 5944 6166 -8 21 36 0 0 chr10 25108427 25108455 -120480833 + AT_rich Low_complexity Low_complexity 1 28 0 2103 132 26 59 chr10 25110025 25110481 -120478807 + L1MB3 LINE L1 5736 6176 -7 268 286 167 0 chr10 25110793 25110877 -120478411 - MIR SINE MIR -122 140 43 255 241 46 11 chr10 25111103 25111190 -120478098 - MLT1L LTR MaLR -353 262 173 23 0 0 0 chr10 25111524 25111547 -120477741 + AT_rich Low_complexity Low_complexity 1 23 0 2426 151 31 24 chr10 25111912 25112337 -120476951 - MSTA LTR MaLR 0 428 1 30 0 0 0 chr10 25114451 25114481 -120474807 + AT_rich Low_complexity Low_complexity 1 30 0 2940 33 10 0 chr10 25114499 25114888 -120474400 + L1P LINE L1 4994 5386 -760 1753 117 0 22 chr10 25115073 25115347 -120473941 - AluY SINE Alu -4 307 40 2259 108 3 10 chr10 25115376 25115673 -120473615 + AluSx SINE Alu 3 297 -15 21 36 0 0 chr10 25115696 25115724 -120473564 + AT_rich Low_complexity Low_complexity 1 28 0 6751 62 19 0 chr10 25115747 25116779 -120472509 - L1PA7 LINE L1 -6 6148 5131 440 51 0 0 chr10 25116780 25116839 -120472449 + L1PA7 LINE L1 5061 5119 -1027 4638 187 69 18 chr10 25116839 25118003 -120471285 - L1MC1 LINE L1 -5 6328 5225 2312 82 7 0 chr10 25118003 25118296 -120470992 - AluY SINE Alu -16 295 1 4638 187 69 18 chr10 25118296 25119158 -120470130 - L1MC1 LINE L1 -1108 5225 4078 2305 175 7 12 chr10 25119180 25119757 -120469531 - MER72 LTR ERV1 -28 694 82 2102 221 45 22 chr10 25119758 25120361 -120468927 - L1MC1 LINE L1 -2057 4089 3473 541 248 57 52 chr10 25120377 25120607 -120468681 - MER2 DNA MER2_type -1 344 114 864 242 49 0 chr10 25120608 25120914 -120468374 - L1MC1 LINE L1 -2860 3286 2966 2018 130 3 0 chr10 25121110 25121395 -120467893 - AluSx SINE Alu -14 298 13 25 31 0 0 chr10 25121423 25121455 -120467833 + AT_rich Low_complexity Low_complexity 1 32 0 1050 221 105 3 chr10 25121490 25121784 -120467504 + MER2 DNA MER2_type 11 334 -11 24 32 0 0 chr10 25122153 25122184 -120467104 + AT_rich Low_complexity Low_complexity 1 31 0 2132 125 0 16 chr10 25122380 25122683 -120466605 - AluSx SINE Alu -14 298 1 291 257 64 105 chr10 25122744 25122900 -120466388 - L1ME3A LINE L1 -232 5938 5777 1189 109 15 25 chr10 25122900 25123101 -120466187 - L1PA13 LINE L1 -5 6158 5960 291 257 64 105 chr10 25123101 25123286 -120466002 - L1ME3A LINE L1 -393 5777 5611 932 104 0 0 chr10 25123322 25123470 -120465818 - AluSg/x SINE Alu 0 303 156 574 274 19 14 chr10 25123470 25123858 -120465430 - L1ME3A LINE L1 -603 5567 5177 410 228 32 51 chr10 25123859 25124017 -120465271 - L1MA10 LINE L1 -4 6330 6176 * 690 211 22 28 chr10 25123994 25124174 -120465114 - L1ME LINE L1 -471 5695 5517 616 270 68 73 chr10 25124169 25124629 -120464659 - L1ME3A LINE L1 -953 5193 4737 * 1758 176 0 10 chr10 25124629 25124919 -120464369 - AluJo SINE Alu -25 287 1 616 270 68 73 chr10 25124919 25125251 -120464037 - L1ME3A LINE L1 -1409 4737 4405 2146 95 18 3 chr10 25125303 25125587 -120463701 - AluSc SINE Alu -21 288 1 2106 273 70 38 chr10 25126833 25127106 -120462182 - L2 LINE L2 0 3313 3050 2026 158 52 3 chr10 25127106 25127474 -120461814 + L1PB4 LINE L1 5757 6142 -14 2106 273 70 38 chr10 25127474 25128319 -120460969 - L2 LINE L2 -263 3050 2157 1703 189 11 3 chr10 25128468 25128753 -120460535 - AluJo SINE Alu -25 287 1 1056 115 0 0 chr10 25128887 25129026 -120460262 + AluSg/x SINE Alu 149 287 -25 211 229 16 33 chr10 25129429 25129490 -120459798 + CT-rich Low_complexity Low_complexity 4 63 0 483 316 143 23 chr10 25130018 25130369 -120458919 - L2 LINE L2 -553 2761 2369 360 280 49 35 chr10 25130372 25130446 -120458842 - L2 LINE L2 -1251 2063 1992 2645 147 7 16 chr10 25130446 25130876 -120458412 - MSTB LTR MaLR 0 426 1 360 280 49 35 chr10 25130876 25130944 -120458344 - L2 LINE L2 -1322 1992 1919 216 365 51 26 chr10 25132011 25132167 -120457121 - L2 LINE L2 -181 3091 2932 1497 231 12 34 chr10 25132776 25133192 -120456096 - MLT2D LTR ERVL -7 407 1 359 236 0 0 chr10 25133302 25133374 -120455914 + L2 LINE L2 3242 3313 0 2303 147 24 22 chr10 25134125 25134504 -120454784 + MSTB1 LTR MaLR 15 397 -35 2463 81 0 0 chr10 25134504 25134812 -120454476 - AluY SINE Alu -2 309 2 2303 147 24 22 chr10 25134812 25134847 -120454441 + MSTB1 LTR MaLR 397 430 -2 186 369 50 30 chr10 25136225 25136423 -120452865 + L2 LINE L2 200 401 -2913 378 330 17 8 chr10 25136424 25136542 -120452746 + L2 LINE L2 3153 3271 -1 496 211 12 23 chr10 25136542 25136713 -120452575 + GA-rich Low_complexity Low_complexity 1 169 0 319 371 88 17 chr10 25136757 25137110 -120452178 + L2 LINE L2 444 821 -2493 737 345 124 16 chr10 25137182 25137506 -120451782 + L2 LINE L2 1782 2070 -1244 2133 111 17 0 chr10 25137506 25137795 -120451493 - AluSc SINE Alu -14 295 2 737 345 124 16 chr10 25137795 25138454 -120450834 + L2 LINE L2 2070 2871 -443 193 274 179 34 chr10 25138684 25138801 -120450487 + L2 LINE L2 3180 3313 0 494 70 14 0 chr10 25139025 25139096 -120450192 + (TTCCC)n Simple_repeat Simple_repeat 4 75 0 1882 166 0 6 chr10 25139105 25139418 -120449870 - AluSx SINE Alu 0 312 2 445 275 75 44 chr10 25140951 25141111 -120448177 - MIR SINE MIR -40 222 58 261 340 107 55 chr10 25141984 25142275 -120447013 + L2 LINE L2 2958 3263 -9 241 344 22 11 chr10 25143438 25143528 -120445760 + MIR SINE MIR 35 125 -83 1741 171 0 43 chr10 25144033 25144355 -120444933 - AluJo SINE Alu -4 308 1 23 20 8 0 chr10 25144748 25144818 -120444470 + AT_rich Low_complexity Low_complexity 1 30 0 3875 198 50 26 chr10 25144840 25145598 -120443690 - L1MB3 LINE L1 -8 6175 5437 2275 122 0 0 chr10 25145598 25145910 -120443378 - AluSx SINE Alu 0 312 1 3875 198 50 26 chr10 25145910 25146659 -120442629 - L1MB3 LINE L1 -746 5437 4635 303 214 0 0 chr10 25146698 25146768 -120442520 + CT-rich Low_complexity Low_complexity 1 70 0 1716 158 0 0 chr10 25146768 25147028 -120442260 - AluSq SINE Alu -1 312 53 2893 180 30 2 chr10 25147028 25147672 -120441616 - L1MB3 LINE L1 -1504 4642 3981 276 305 78 16 chr10 25147785 25147913 -120441375 + MIR SINE MIR 6 141 -121 961 127 0 0 chr10 25148752 25148878 -120440410 + FLAM_C SINE Alu 1 126 -17 1093 180 9 73 chr10 25149062 25149295 -120439993 + AluJo SINE Alu 1 218 -94 3081 142 9 4 chr10 25149359 25149910 -120439378 - L1P LINE L1 -3004 3142 2589 11371 112 24 6 chr10 25149910 25150214 -120439074 + L1PA8A LINE L1 3199 3496 -2650 195 42 0 0 chr10 25150214 25150238 -120439050 + (CAA)n Simple_repeat Simple_repeat 1 24 0 11371 112 24 6 chr10 25150238 25151796 -120437492 + L1PA8A LINE L1 3496 5094 -1052 454 141 0 0 chr10 25151870 25151948 -120437340 - MSTB1 LTR MaLR 0 432 355 5956 74 16 0 chr10 25152007 25152991 -120436297 + L1PA8A LINE L1 5098 6095 -36 440 111 0 37 chr10 25153023 25153104 -120436184 - MSTB1 LTR MaLR 0 432 355 2371 38 72 0 chr10 25153276 25153566 -120435722 - AluY SINE Alu 0 311 1 1705 148 71 41 chr10 25153613 25153977 -120435311 + THE1C LTR MaLR 1 375 0 2115 143 0 9 chr10 25154637 25154985 -120434303 - AluSx SINE Alu 0 345 1 836 135 0 57 chr10 25155547 25155688 -120433600 + FLAM_C SINE Alu 1 133 -10 442 281 0 25 chr10 25156472 25156593 -120432695 + L2 LINE L2 3188 3305 -8 4102 132 6 60 chr10 25157071 25157800 -120431488 - LTR8 LTR ERV1 0 691 3 300 272 126 0 chr10 25159661 25159764 -120429524 - MLT1J2 LTR MaLR -61 389 274 410 257 184 11 chr10 25159795 25159974 -120429314 - MLT1J2 LTR MaLR -240 210 1 311 26 0 0 chr10 25160948 25160986 -120428302 + U2 snRNA snRNA 1 38 -150 7599 25 4 0 chr10 25161308 25162244 -120427044 - L1P LINE L1 -1245 4901 3962 1119 318 64 7 chr10 25162440 25163065 -120426223 + MER115 DNA AcHobo 1 692 -1 254 239 65 154 chr10 25163287 25163580 -120425708 - L2 LINE L2 -739 2575 2309 180 0 0 0 chr10 25164433 25164453 -120424835 + (TA)n Simple_repeat Simple_repeat 2 21 0 39 68 0 0 chr10 25164640 25164714 -120424574 + AT_rich Low_complexity Low_complexity 1 74 0 2175 118 0 10 chr10 25164773 25165077 -120424211 - AluSx SINE Alu -11 301 1 3391 129 63 3 chr10 25165159 25165757 -120423531 - LTR24C LTR ERV1 -1 634 1 2178 118 7 3 chr10 25166027 25166332 -120422956 - AluSg SINE Alu -3 307 2 1986 184 36 2 chr10 25166570 25166983 -120422305 - MER89 LTR ERV1 -131 428 2 394 281 48 0 chr10 25166986 25167132 -120422156 - L1ME3A LINE L1 -329 5841 5689 1780 178 40 0 chr10 25167866 25168187 -120421101 + MER7A DNA MER2_type 12 343 -3 7954 197 49 47 chr10 25168245 25168794 -120420494 - L1MA10 LINE L1 -43 6527 5981 2167 97 0 0 chr10 25168794 25169072 -120420216 - AluSq SINE Alu -33 280 3 7954 197 49 47 chr10 25169072 25170530 -120418758 - L1MA10 LINE L1 -589 5981 4527 1690 146 0 4 chr10 25170530 25170791 -120418497 - AluSx SINE Alu -17 295 36 7954 197 49 47 chr10 25170791 25171182 -120418106 - L1MA10 LINE L1 -2043 4527 4138 1489 126 31 0 chr10 25171182 25171405 -120417883 + MER30 DNA MER1_type 1 230 0 7954 197 49 47 chr10 25171405 25172131 -120417157 - L1MA10 LINE L1 -2432 4138 3393 1219 239 35 37 chr10 25172128 25172891 -120416397 - L1MA10 LINE L1 -3588 2794 2030 * 449 351 76 54 chr10 25172994 25173593 -120415695 + L2 LINE L2 2589 3198 -74 202 225 0 0 chr10 25173634 25173674 -120415614 + (CATA)n Simple_repeat Simple_repeat 3 42 0 196 287 181 11 chr10 25173677 25173771 -120415517 + MIR3 SINE MIR 47 156 -52 210 302 23 47 chr10 25175382 25175468 -120413820 - L2 LINE L2 0 3272 3189 1710 203 3 13 chr10 25176006 25176317 -120412971 + AluJo SINE Alu 1 308 -4 322 315 101 39 chr10 25176387 25176565 -120412723 - MIR3 SINE MIR -7 201 13 444 372 13 13 chr10 25177489 25177720 -120411568 + MIR SINE MIR 22 252 -10 327 311 0 0 chr10 25177998 25178088 -120411200 - L1MC4 LINE L1 -1339 6703 6614 686 119 53 35 chr10 25178113 25178383 -120410905 + (CATATA)n Simple_repeat Simple_repeat 1 274 0 307 318 0 0 chr10 25178386 25178474 -120410814 - L1MC4 LINE L1 -1341 6701 6614 * 361 197 46 0 chr10 25178458 25178567 -120410721 - L1MCa LINE L1 -1339 6983 1995 344 273 23 0 chr10 25178492 25178580 -120410708 + L1MC4 LINE L1 6614 6703 -1339 * 313 244 47 23 chr10 25178586 25178672 -120410616 - L1MC4 LINE L1 -1339 6703 6616 251 231 0 22 chr10 25178673 25178764 -120410524 - L1MC4 LINE L1 -1340 6702 6614 251 157 20 0 chr10 25178765 25178816 -120410472 + (TA)n Simple_repeat Simple_repeat 2 53 0 198 0 0 0 chr10 25178817 25178839 -120410449 + (TATG)n Simple_repeat Simple_repeat 3 24 0 1625 176 3 7 chr10 25178844 25179128 -120410160 - AluJb SINE Alu -29 283 1 844 207 17 81 chr10 25179340 25179698 -120409590 - L1MC5 LINE L1 -48 7913 7579 2323 87 0 34 chr10 25180573 25180895 -120408393 - AluY SINE Alu 0 311 1 3294 177 81 30 chr10 25183425 25184170 -120405118 - LTR39 LTR ERV1 0 783 1 416 252 52 26 chr10 25184293 25184408 -120404880 + MIR SINE MIR 37 154 -108 306 0 0 0 chr10 25184434 25184468 -120404820 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 2121 127 3 0 chr10 25184473 25184756 -120404532 - AluSx SINE Alu -28 284 1 1450 182 4 16 chr10 25184960 25185213 -120404075 - AluJo SINE Alu -26 286 37 380 288 94 24 chr10 25185395 25185551 -120403737 - MIR SINE MIR -74 188 18 2107 130 140 8 chr10 25185551 25185929 -120403359 - MSTA LTR MaLR 0 428 1 380 288 94 24 chr10 25185929 25185942 -120403346 - MIR SINE MIR -244 18 7 2142 153 67 21 chr10 25186975 25187407 -120401881 - MLT1C LTR MaLR -15 452 1 6050 64 0 4 chr10 25188802 25189581 -120399707 + L1PA7 LINE L1 5376 6151 -3 524 272 131 15 chr10 25189709 25189915 -120399373 - MIR SINE MIR 0 262 33 469 234 32 24 chr10 25191006 25191130 -120398158 - MIR SINE MIR -24 238 114 795 285 98 30 chr10 25191328 25191756 -120397532 + LTR16A LTR ERVL 1 457 0 195 42 0 0 chr10 25191969 25191993 -120397295 + (CA)n Simple_repeat Simple_repeat 1 24 0 4656 105 10 31 chr10 25193004 25193778 -120395510 + L1PA13 LINE L1 5400 6157 -6 2033 96 68 7 chr10 25193825 25194118 -120395170 + AluSq SINE Alu 1 311 -2 651 336 111 38 chr10 25195764 25196288 -120393000 + L1MEd LINE L1 458 1019 -5511 333 242 91 28 chr10 25196632 25196884 -120392404 + L1MEd LINE L1 1345 1612 -4918 469 330 57 9 chr10 25196924 25197151 -120392137 + HAL1 LINE L1 1361 1598 -909 379 286 93 6 chr10 25197534 25197716 -120391572 + L1MEd LINE L1 2384 2581 -3959 243 223 69 34 chr10 25197719 25197894 -120391394 + L1M4 LINE L1 4249 4429 -1717 2178 135 8 3 chr10 25197933 25198288 -120391000 + MER47A DNA MER2_type 1 357 -9 275 237 11 0 chr10 25198289 25198382 -120390906 + (TCTA)n Simple_repeat Simple_repeat 4 97 0 * 282 149 18 54 chr10 25198369 25198537 -120390751 + (TA)n Simple_repeat Simple_repeat 1 162 0 225 97 65 32 chr10 25198549 25198611 -120390677 + (CTATA)n Simple_repeat Simple_repeat 2 65 0 2767 180 160 31 chr10 25199110 25199959 -120389329 - L1MB7 LINE L1 -2 6182 5227 604 277 88 36 chr10 25200076 25200495 -120388793 - L1ME4a LINE L1 -202 5919 5479 247 287 35 27 chr10 25200937 25201086 -120388202 + MIR SINE MIR 18 259 -3 193 286 0 71 chr10 25201801 25201885 -120387403 - MIR3 SINE MIR -6 202 125 26 0 0 27 chr10 25201957 25201974 -120387314 + AT_rich Low_complexity Low_complexity 1 17 -19 2536 65 0 0 chr10 25201974 25202281 -120387007 + AluY SINE Alu 1 307 -4 26 0 0 27 chr10 25202281 25202300 -120386988 + AT_rich Low_complexity Low_complexity 17 36 0 1638 112 4 4 chr10 25202882 25202901 -120386387 - AluSg/x SINE Alu 0 312 294 208 0 0 0 chr10 25202901 25202924 -120386364 + (TTTG)n Simple_repeat Simple_repeat 1 180 0 1638 112 4 4 chr10 25202924 25203136 -120386152 - AluSg/x SINE Alu -17 295 69 532 107 13 0 chr10 25203136 25203211 -120386077 + AluS SINE Alu 5 80 -232 331 315 9 18 chr10 25204030 25204141 -120385147 - MIR3 SINE MIR -2 206 97 911 194 0 13 chr10 25204419 25204574 -120384714 + AluJo SINE Alu 1 153 -159 375 278 0 0 chr10 25204590 25204680 -120384608 - L1MC4 LINE L1 -1339 6703 6614 347 300 0 0 chr10 25204606 25204696 -120384592 + L1MC4 LINE L1 6614 6703 -1339 * 225 178 0 0 chr10 25204702 25204747 -120384541 + (CA)n Simple_repeat Simple_repeat 2 46 0 484 85 71 7 chr10 25204843 25204984 -120384304 + (TA)n Simple_repeat Simple_repeat 1 150 0 865 301 48 0 chr10 25205730 25206019 -120383269 + MLT1J LTR MaLR 1 303 -208 280 333 131 18 chr10 25206411 25206579 -120382709 + MIR3 SINE MIR 20 206 -2 375 23 0 0 chr10 25207705 25207749 -120381539 + (TG)n Simple_repeat Simple_repeat 1 44 0 2153 188 25 58 chr10 25209729 25210260 -120379028 - MLT1E2 LTR MaLR -111 515 3 220 272 19 38 chr10 25210492 25210599 -120378689 + GA-rich Low_complexity Low_complexity 1 105 0 1753 172 0 13 chr10 25210603 25210911 -120378377 + AluJb SINE Alu 3 306 -6 2426 87 6 0 chr10 25210959 25211270 -120378018 + AluSq SINE Alu 1 313 0 269 50 0 25 chr10 25211270 25211310 -120377978 + (TA)n Simple_repeat Simple_repeat 2 40 0 399 310 16 0 chr10 25211420 25211549 -120377739 - MER94 DNA DNA -2 132 2 453 313 58 50 chr10 25212363 25212622 -120376666 + MIR SINE MIR 1 261 -1 488 128 21 64 chr10 25213009 25213103 -120376185 + AluJo SINE Alu 128 217 -95 240 297 74 74 chr10 25213523 25213671 -120375617 - L2 LINE L2 0 3272 3125 697 213 40 23 chr10 25213729 25213903 -120375385 + MER5B DNA MER1_type 2 178 0 354 250 0 0 chr10 25214130 25214198 -120375090 - L2 LINE L2 -11 3302 3235 331 330 80 17 chr10 25214227 25214403 -120374885 + MER5A DNA MER1_type 3 189 0 185 281 46 78 chr10 25214469 25214622 -120374666 - L2 LINE L2 -219 3053 2906 205 191 0 21 chr10 25217200 25217247 -120372041 + GA-rich Low_complexity Low_complexity 1 46 0 510 114 0 0 chr10 25217278 25217357 -120371931 + (TAGG)n Simple_repeat Simple_repeat 1 79 0 270 95 0 0 chr10 25217433 25217475 -120371813 + (CA)n Simple_repeat Simple_repeat 2 43 0 885 186 166 77 chr10 25217726 25218133 -120371155 + L1 LINE L1 4950 5391 -775 337 225 0 25 chr10 25218390 25218470 -120370818 - HAL1b LINE L1 -437 911 834 3369 213 70 22 chr10 25218528 25219341 -120369947 - MER21B LTR ERV1 -11 852 1 2076 110 120 3 chr10 25219357 25219683 -120369605 - THE1B LTR MaLR 0 364 1 532 254 15 0 chr10 25219743 25219873 -120369415 + MIR SINE MIR 131 262 0 1044 106 14 0 chr10 25219967 25220108 -120369180 + AluSg/x SINE Alu 156 298 -14 306 305 99 46 chr10 25220327 25220478 -120368810 - L1MEd LINE L1 -4905 1214 1056 635 262 57 9 chr10 25220996 25221206 -120368082 - L2 LINE L2 0 3313 3094 1043 241 147 105 chr10 25221284 25221978 -120367310 - L2 LINE L2 -728 2586 1864 719 82 49 8 chr10 25222525 25222647 -120366641 + MLT1B LTR MaLR 1 127 -263 1034 143 11 0 chr10 25222944 25223126 -120366162 + MLT1B LTR MaLR 131 314 -76 1174 185 0 151 chr10 25223137 25223254 -120366034 - L1PB4 LINE L1 0 6156 6023 1749 137 29 22 chr10 25223254 25223531 -120365757 + AluJb SINE Alu 1 279 -33 1174 185 0 151 chr10 25223531 25223797 -120365491 - L1PB4 LINE L1 -133 6023 5831 475 157 34 12 chr10 25223799 25223904 -120365384 + MLT1B LTR MaLR 300 388 -2 1752 192 0 23 chr10 25224150 25224452 -120364836 - AluJb SINE Alu -17 295 1 373 312 148 8 chr10 25224702 25224939 -120364349 - L1ME LINE L1 -333 5788 5519 2066 141 10 0 chr10 25225067 25225372 -120363916 - AluSx SINE Alu -4 308 1 2283 114 3 0 chr10 25226769 25227066 -120362222 - AluSq SINE Alu -15 298 1 744 344 20 4 chr10 25227508 25227761 -120361527 + MIR SINE MIR 6 262 0 447 273 43 22 chr10 25227839 25227978 -120361310 - L2 LINE L2 -297 3016 2875 2050 132 0 0 chr10 25228439 25228778 -120360510 - AluSx SINE Alu 0 340 2 1164 288 58 27 chr10 25230300 25230993 -120358295 - HAL1 LINE L1 -1734 773 10 557 325 150 15 chr10 25230996 25231351 -120357937 + L2 LINE L2 1813 2119 -1195 19888 94 23 3 chr10 25231351 25235066 -120354222 - L1PA7 LINE L1 0 6154 2377 557 325 150 15 chr10 25235066 25235365 -120353923 + L2 LINE L2 2119 2555 -759 400 292 92 0 chr10 25235564 25235684 -120353604 + L2 LINE L2 3142 3272 0 738 94 0 0 chr10 25236191 25236297 -120352991 + L1PA5 LINE L1 6048 6153 -1 275 330 93 25 chr10 25237098 25237216 -120352072 + L2 LINE L2 3141 3266 -6 1827 124 148 9 chr10 25237286 25237625 -120351663 - MSTA LTR MaLR 0 428 43 41645 41 2 1 chr10 25237625 25243766 -120345522 - L1PA3 LINE L1 -1 6154 10 313 185 0 0 chr10 25243775 25243829 -120345459 - MSTA LTR MaLR -374 54 1 331 280 120 63 chr10 25244136 25244311 -120344977 - MER5A DNA MER1_type -4 185 1 209 191 0 0 chr10 25244414 25244456 -120344832 + (TATG)n Simple_repeat Simple_repeat 2 43 0 197 294 0 0 chr10 25244791 25244842 -120344446 + MIR SINE MIR 103 153 -55 260 208 0 14 chr10 25245033 25245105 -120344183 + (TA)n Simple_repeat Simple_repeat 1 71 0 264 154 0 0 chr10 25245726 25245778 -120343510 + (TATATG)n Simple_repeat Simple_repeat 3 54 0 238 286 0 0 chr10 25245853 25245909 -120343379 + MIR3 SINE MIR 151 206 -2 1944 184 3 0 chr10 25247441 25247824 -120341464 - AluJb SINE Alu 0 384 1 2793 213 38 7 chr10 25247994 25248601 -120340687 + MLT1E2 LTR MaLR 1 626 0 464 317 30 18 chr10 25249275 25249442 -120339846 - L2 LINE L2 -436 2878 2710 436 268 23 5 chr10 25249683 25249820 -120339468 + MIR SINE MIR 56 192 -58 898 202 93 75 chr10 25249925 25250311 -120338977 + MSTD LTR MaLR 1 393 -3 531 293 130 19 chr10 25250603 25250684 -120338604 - MIR SINE MIR -24 238 167 288 0 0 0 chr10 25250684 25250716 -120338572 + (TTA)n Simple_repeat Simple_repeat 2 33 0 531 293 130 19 chr10 25250716 25250842 -120338446 - MIR SINE MIR -95 167 8 21 0 0 0 chr10 25251026 25251047 -120338241 + AT_rich Low_complexity Low_complexity 1 21 0 285 51 0 0 chr10 25251125 25251164 -120338124 + (CA)n Simple_repeat Simple_repeat 2 40 0 2199 161 19 38 chr10 25251297 25251719 -120337569 - MLT2D LTR ERVL 0 414 1 265 310 34 56 chr10 25251801 25252069 -120337219 - L1MC/D LINE L1 -2264 5544 5283 7675 24 4 2 chr10 25253460 25254701 -120334587 - L1PA3 LINE L1 0 6155 4915 379 42 0 0 chr10 25254702 25254750 -120334538 + 5S rRNA rRNA 1 48 -73 270 0 0 0 chr10 25255736 25255766 -120333522 + (T)n Simple_repeat Simple_repeat 1 30 0 300 329 19 52 chr10 25255974 25256129 -120333159 + MIR3 SINE MIR 20 169 -39 705 282 75 9 chr10 25257186 25257399 -120331889 - MIR SINE MIR -15 247 21 314 291 28 85 chr10 25257464 25257605 -120331683 - MIR SINE MIR -83 179 47 228 111 0 0 chr10 25257605 25257641 -120331647 + (T)n Simple_repeat Simple_repeat 1 36 0 195 352 62 31 chr10 25258595 25258757 -120330531 - MIR3 SINE MIR -26 182 16 2213 152 10 2 chr10 25259175 25259570 -120329718 - L1PA16 LINE L1 0 6166 5769 4369 66 0 2 chr10 25259570 25260130 -120329158 - L1PA6 LINE L1 0 6154 5593 2280 165 28 28 chr10 25260439 25260864 -120328424 + MSTB LTR MaLR 1 425 -1 410 256 188 23 chr10 25260939 25261072 -120328216 - MER5B DNA MER1_type -1 177 23 272 243 83 19 chr10 25261138 25261282 -120328006 - MIR SINE MIR 0 208 56 520 246 0 74 chr10 25261792 25261967 -120327321 - L2 LINE L2 -2 3311 3150 * 588 225 130 12 chr10 25261958 25262127 -120327161 - MIR SINE MIR -57 205 17 337 323 127 13 chr10 25262144 25262431 -120326857 - L2 LINE L2 -212 3101 2782 23 0 0 0 chr10 25262440 25262463 -120326825 + AT_rich Low_complexity Low_complexity 1 23 0 3854 125 36 5 chr10 25262619 25263252 -120326036 - L1PA16 LINE L1 0 6166 5514 1720 157 0 9 chr10 25263252 25263576 -120325712 - L1P4 LINE L1 -573 5593 5273 681 348 13 16 chr10 25264770 25265033 -120324255 - MIR SINE MIR 0 262 3 187 286 143 48 chr10 25265110 25265236 -120324052 + L2 LINE L2 3100 3237 -35 1017 274 134 25 chr10 25265416 25265886 -120323402 - LTR33 LTR ERVL 0 521 1 204 229 0 0 chr10 25265974 25266022 -120323266 - L2 LINE L2 -1 3312 3265 4963 165 28 7 chr10 25268211 25269140 -120320148 - L1MC1 LINE L1 0 6333 5385 1371 151 12 4 chr10 25269571 25269816 -120319472 - MLT2D LTR ERVL -167 247 1 265 310 34 56 chr10 25269898 25270166 -120319122 - L1MC/D LINE L1 -2264 5544 5283 18292 34 0 0 chr10 25271558 25274546 -120314742 - L1PA3 LINE L1 0 6155 3166 851 183 7 108 chr10 25274788 25275067 -120314221 + MLT1A1 LTR MaLR 115 365 0 183 281 56 11 chr10 25275380 25275469 -120313819 + MIR SINE MIR 47 139 -123 252 143 0 0 chr10 25275831 25275873 -120313415 + (A)n Simple_repeat Simple_repeat 1 42 0 370 298 78 27 chr10 25275940 25276131 -120313157 + MIR SINE MIR 9 213 -49 892 246 106 47 chr10 25276131 25276517 -120312771 + MLT1I LTR MaLR 1 409 0 370 298 78 27 chr10 25276517 25276567 -120312721 + MIR SINE MIR 213 259 -3 1751 230 37 7 chr10 25277151 25277612 -120311676 + MER39 LTR ERV1 233 707 0 1256 108 0 0 chr10 25278563 25278749 -120310539 - L1PA12 LINE L1 -191 5977 5792 820 239 86 17 chr10 25279703 25280541 -120308747 - L1ME3A LINE L1 -70 6100 5216 267 264 34 34 chr10 25280763 25280911 -120308377 - L1ME3A LINE L1 -1812 4334 4187 * 504 266 54 20 chr10 25280900 25281103 -120308185 - L1ME3A LINE L1 -2462 3684 3475 261 222 32 0 chr10 25281437 25281500 -120307788 - MER20B DNA MER1_type -718 65 1 2089 139 3 10 chr10 25281554 25281863 -120307425 + AluSx SINE Alu 1 307 -5 321 253 0 0 chr10 25281863 25281951 -120307337 + GA-rich Low_complexity Low_complexity 6 96 0 246 218 0 0 chr10 25281993 25282048 -120307240 - MER112 DNA MER1_type -111 149 95 991 233 66 66 chr10 25282419 25282887 -120306401 + L1ME3 LINE L1 5379 5846 -316 1707 133 52 3 chr10 25282929 25283253 -120306035 + L1MB2 LINE L1 5804 6143 -28 214 189 19 0 chr10 25283503 25283532 -120305756 + (TA)n Simple_repeat Simple_repeat 1 33 -21 207 0 0 0 chr10 25283532 25283555 -120305733 + (TG)n Simple_repeat Simple_repeat 2 24 0 214 189 19 0 chr10 25283555 25283578 -120305710 + (TA)n Simple_repeat Simple_repeat 33 54 0 24 0 0 0 chr10 25283917 25283941 -120305347 + AT_rich Low_complexity Low_complexity 1 24 0 1177 48 0 0 chr10 25285708 25285853 -120303435 - L1PA3 LINE L1 -3 6152 6008 261 0 0 0 chr10 25286015 25286044 -120303244 + (CTTG)n Simple_repeat Simple_repeat 4 32 0 1515 167 8 12 chr10 25286044 25286294 -120302994 - AluJb SINE Alu -55 257 7 322 264 28 0 chr10 25286294 25286366 -120302922 + MIR3 SINE MIR 85 158 -50 * 324 354 113 70 chr10 25286361 25286731 -120302557 + L2 LINE L2 2881 3266 -6 662 240 27 38 chr10 25286742 25286925 -120302363 - L2 LINE L2 0 3313 3133 481 341 44 36 chr10 25287530 25287782 -120301506 + MIR SINE MIR 8 261 -1 186 43 0 0 chr10 25289590 25289613 -120299675 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 227 434 7 0 chr10 25290286 25290422 -120298866 - L2 LINE L2 -189 3083 2947 1837 158 4 4 chr10 25290544 25290823 -120298465 - AluJo SINE Alu -23 289 11 241 185 31 0 chr10 25291274 25291339 -120297949 + GA-rich Low_complexity Low_complexity 3 69 0 890 197 8 38 chr10 25291667 25291906 -120297382 + L1MD3 LINE L1 7763 7994 -1 2034 145 7 0 chr10 25292910 25293207 -120296081 + AluSc SINE Alu 1 299 -10 185 132 26 0 chr10 25293231 25293269 -120296019 + CT-rich Low_complexity Low_complexity 3 41 0 1568 276 18 12 chr10 25294005 25294515 -120294773 - L1MEc LINE L1 -5847 549 37 1870 146 24 0 chr10 25295042 25295330 -120293958 + AluSq SINE Alu 1 295 -18 1547 207 32 45 chr10 25295393 25295833 -120293455 - MLT1C LTR MaLR 0 467 34 390 227 25 8 chr10 25295880 25295999 -120293289 + LTR33 LTR ERVL 1 121 -400 384 134 12 37 chr10 25296620 25296702 -120292586 + MER116 DNA Mariner 1 80 0 6777 66 75 0 chr10 25296722 25297473 -120291815 - L1PA7 LINE L1 -16 6138 5347 2244 119 0 31 chr10 25297473 25297792 -120291496 - AluSc SINE Alu 0 309 1 6777 66 75 0 chr10 25297792 25298140 -120291148 - L1PA7 LINE L1 -807 5347 5026 2106 88 28 3 chr10 25298162 25298445 -120290843 - AluSc SINE Alu -19 290 1 255 186 0 0 chr10 25298451 25298494 -120290794 - tRNA-Leu-CTT tRNA tRNA -42 43 1 711 209 27 0 chr10 25299654 25299802 -120289486 + MER45A DNA AcHobo 1 152 -26 23 54 0 0 chr10 25300617 25300654 -120288634 + AT_rich Low_complexity Low_complexity 1 37 0 292 230 58 11 chr10 25301176 25301263 -120288025 + L1M4 LINE L1 5495 5585 -599 357 24 0 0 chr10 25301490 25301532 -120287756 + (TG)n Simple_repeat Simple_repeat 1 42 0 765 48 0 29 chr10 25301543 25301647 -120287641 - L1PA8 LINE L1 -7 6165 6065 255 210 0 32 chr10 25301729 25301791 -120287497 + (TATATG)n Simple_repeat Simple_repeat 5 64 0 4123 189 28 19 chr10 25302054 25302620 -120286668 - L1MB8 LINE L1 -1 6177 5618 2179 117 3 3 chr10 25302620 25302927 -120286361 - AluSq SINE Alu -6 307 1 4123 189 28 19 chr10 25302927 25303390 -120285898 - L1MB8 LINE L1 -560 5618 5134 1999 129 81 35 chr10 25303390 25303738 -120285550 - THE1B LTR MaLR 0 364 1 4123 189 28 19 chr10 25303738 25303880 -120285408 - L1MB8 LINE L1 -1044 5134 4995 1913 174 10 22 chr10 25303878 25304281 -120285007 + L1MA7 LINE L1 5791 6188 -103 * 773 149 0 0 chr10 25304283 25304417 -120284871 + MER4B LTR ERV1 1 134 -476 3706 155 38 6 chr10 25304419 25305108 -120284180 - MER50 LTR ERV1 -23 711 1 3478 144 123 3 chr10 25305110 25305769 -120283519 + MER4D LTR ERV1 132 869 -34 2669 74 0 0 chr10 25305771 25306136 -120283152 + L1PA8A LINE L1 5559 5923 -208 22 56 0 0 chr10 25306137 25306173 -120283115 + AT_rich Low_complexity Low_complexity 1 36 0 3053 69 16 0 chr10 25306234 25306665 -120282623 + L1PA8A LINE L1 5677 6169 -3 474 299 8 8 chr10 25306949 25307066 -120282222 - MIR SINE MIR -118 144 28 206 356 66 7 chr10 25307755 25307889 -120281399 + MIR SINE MIR 11 154 -62 315 285 111 21 chr10 25307946 25308090 -120281198 + MIR SINE MIR 48 204 -58 620 127 6 158 chr10 25308106 25308264 -120281024 + AluJb SINE Alu 1 134 -178 349 372 42 37 chr10 25309708 25309899 -120279389 - MIR3 SINE MIR -7 201 10 480 269 45 8 chr10 25310919 25311087 -120278201 - MIR SINE MIR -21 187 6 22 35 0 0 chr10 25312223 25312252 -120277036 + AT_rich Low_complexity Low_complexity 1 29 0 210 298 66 58 chr10 25312842 25312963 -120276325 - MIR SINE MIR -64 144 23 490 297 126 36 chr10 25313445 25314058 -120275230 - HAL1 LINE L1 -1304 1203 536 252 250 83 0 chr10 25315610 25315694 -120273594 + L3 LINE CR1 1392 1482 -95 283 286 82 73 chr10 25315732 25315952 -120273336 - MIR SINE MIR -33 229 8 414 0 0 0 chr10 25316121 25316167 -120273121 + (TC)n Simple_repeat Simple_repeat 1 46 0 2108 123 0 0 chr10 25316167 25316449 -120272839 - AluSq SINE Alu -28 285 1 348 253 133 52 chr10 25316513 25316837 -120272451 - MLT1H LTR MaLR -142 407 58 2340 139 50 38 chr10 25316866 25317289 -120271999 - MSTA LTR MaLR 0 428 1 239 250 23 23 chr10 25317337 25317425 -120271863 - MLT1H-int LTR MaLR -35 1336 1249 431 35 0 0 chr10 25317976 25318033 -120271255 - L1PA8 LINE L1 -505 5667 5611 * 3692 69 9 9 chr10 25317991 25318524 -120270764 + L1PA8 LINE L1 5639 6171 -1 180 212 141 35 chr10 25319756 25319841 -120269447 + L3 LINE CR1 1483 1576 -1 1559 180 64 15 chr10 25319917 25320244 -120269044 + MER2 DNA MER2_type 1 343 -1 247 309 0 0 chr10 25320415 25320483 -120268805 - L2 LINE L2 -1 3271 3204 343 280 64 0 chr10 25320492 25320617 -120268671 + Charlie1 DNA MER1_type 1 133 -2628 380 212 48 42 chr10 25320626 25320681 -120268607 + Charlie1 DNA MER1_type 2445 2498 -263 2424 74 0 0 chr10 25320681 25320978 -120268310 + AluY SINE Alu 1 297 -14 380 212 48 42 chr10 25320978 25321087 -120268201 + Charlie1 DNA MER1_type 2498 2610 -151 1113 159 82 4 chr10 25321088 25321189 -120268099 - L1MA8 LINE L1 -21 6270 6178 315 71 0 0 chr10 25321189 25321231 -120268057 + (TG)n Simple_repeat Simple_repeat 1 42 0 1113 159 82 4 chr10 25321231 25321386 -120267902 - L1MA8 LINE L1 -113 6178 5994 558 187 13 13 chr10 25321476 25321626 -120267662 - Charlie1 DNA MER1_type -2 2759 2610 232 297 79 20 chr10 25321734 25321835 -120267453 + MLT2E LTR ERVL 35 141 -487 1234 194 72 31 chr10 25322787 25323256 -120266032 - MER39 LTR ERV1 -3 704 5 259 360 65 0 chr10 25323442 25323595 -120265693 + MIR SINE MIR 85 247 -15 341 300 0 36 chr10 25324456 25324566 -120264722 - MIR3 SINE MIR -3 205 100 240 209 12 81 chr10 25326409 25326495 -120262793 - 7SK RNA RNA -69 124 45 2421 93 0 0 chr10 25326615 25326917 -120262371 - AluSx SINE Alu -10 302 1 2095 120 0 74 chr10 25327139 25327465 -120261823 - AluSx SINE Alu -10 302 1 231 316 168 11 chr10 25328703 25328798 -120260490 - L2 LINE L2 -20 3252 3143 341 22 22 0 chr10 25329036 25329082 -120260206 + (TG)n Simple_repeat Simple_repeat 2 48 0 250 279 107 21 chr10 25329421 25329582 -120259706 + MIR SINE MIR 10 183 -65 436 327 67 7 chr10 25329988 25330138 -120259150 + L2 LINE L2 3111 3269 -3 30 0 0 0 chr10 25330289 25330319 -120258969 + AT_rich Low_complexity Low_complexity 1 30 0 1625 160 4 26 chr10 25333385 25333654 -120255634 + AluJo SINE Alu 25 287 -25 2655 99 5 5 chr10 25333778 25334152 -120255136 + THE1C LTR MaLR 2 375 0 243 0 0 0 chr10 25334653 25334680 -120254608 + (CA)n Simple_repeat Simple_repeat 2 28 0 200 289 19 0 chr10 25334852 25334904 -120254384 + L2 LINE L2 3218 3270 -2 254 401 46 0 chr10 25334913 25335065 -120254223 - L2 LINE L2 -34 3279 3121 324 227 52 84 chr10 25335072 25335226 -120254062 - MIR SINE MIR -10 252 104 4884 122 5 13 chr10 25336242 25337069 -120252219 - L1PB2 LINE L1 -3 6148 5329 22 0 0 0 chr10 25337426 25337448 -120251840 + AT_rich Low_complexity Low_complexity 1 22 0 207 0 0 0 chr10 25337547 25337570 -120251718 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 2167 106 3 0 chr10 25337576 25337860 -120251428 - AluSg SINE Alu -25 285 1 532 286 78 19 chr10 25338660 25338866 -120250422 + MIR SINE MIR 21 238 -24 296 235 15 15 chr10 25339082 25339150 -120250138 + MIR SINE MIR 13 80 -182 441 0 0 0 chr10 25341742 25341791 -120247497 + (TAGA)n Simple_repeat Simple_repeat 1 49 0 21 36 0 0 chr10 25342714 25342742 -120246546 + AT_rich Low_complexity Low_complexity 1 28 0 468 320 69 10 chr10 25343111 25343314 -120245974 - MIR SINE MIR 0 262 48 260 311 66 16 chr10 25344566 25344688 -120244600 - MIR SINE MIR -70 192 65 1912 166 0 10 chr10 25344787 25345088 -120244200 + AluJo SINE Alu 1 298 -14 1921 188 127 103 chr10 25346512 25347150 -120242138 - MER82 DNA MER2_type 0 653 1 32 43 0 0 chr10 25348534 25348580 -120240708 + AT_rich Low_complexity Low_complexity 1 46 0 247 208 0 0 chr10 25348845 25348898 -120240390 - MLT1I LTR MaLR -28 381 329 2072 150 3 0 chr10 25349057 25349385 -120239903 + AluSx SINE Alu 1 329 0 302 257 33 59 chr10 25349999 25350151 -120239137 + L1M4 LINE L1 1066 1213 -5329 192 158 0 0 chr10 25350169 25350207 -120239081 + (TATAG)n Simple_repeat Simple_repeat 2 39 0 731 281 18 18 chr10 25350207 25350424 -120238864 + MIR SINE MIR 1 217 -45 1968 151 3 28 chr10 25350624 25350943 -120238345 - AluJo SINE Alu -1 311 1 262 216 63 27 chr10 25351185 25351296 -120237992 + L1MEc LINE L1 40 154 -5965 396 277 188 33 chr10 25351620 25352013 -120237275 + L1MEc LINE L1 561 1014 -5105 1006 38 15 8 chr10 25352019 25352180 -120237108 + L1PA4 LINE L1 6020 6155 0 3883 145 29 14 chr10 25352203 25352926 -120236362 + L1MA8 LINE L1 5556 6289 -2 39 0 0 0 chr10 25352980 25353019 -120236269 + AT_rich Low_complexity Low_complexity 1 39 0 648 276 56 14 chr10 25353122 25353336 -120235952 - MER58A DNA MER1_type 0 224 2 285 273 70 38 chr10 25353432 25353618 -120235670 + L1MEc LINE L1 1214 1428 -1062 358 312 65 20 chr10 25353624 25353823 -120235465 + L1ME3A LINE L1 34 241 -6301 249 283 69 14 chr10 25354141 25354286 -120235002 + L1ME3A LINE L1 722 874 -5668 243 0 0 0 chr10 25354421 25354448 -120234840 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 447 288 34 34 chr10 25354456 25354751 -120234537 + L1ME3A LINE L1 1007 1301 -5245 3602 198 26 30 chr10 25354764 25356403 -120232885 + L1MC2 LINE L1 4222 5858 -486 728 264 60 41 chr10 25356402 25356717 -120232571 + L1ME3A LINE L1 4389 4709 -1935 * 1628 260 72 29 chr10 25356813 25356978 -120232310 + L1ME3 LINE L1 5985 6141 -519 1178 206 4 59 chr10 25356978 25357231 -120232057 - MER8 DNA MER2_type 0 239 1 1628 260 72 29 chr10 25357231 25357650 -120231638 + L1ME3 LINE L1 6141 6594 -66 4330 244 77 7 chr10 25357716 25359680 -120229608 - L1ME1 LINE L1 -5 6230 4130 2570 245 60 42 chr10 25359661 25360717 -120228571 - L1ME1 LINE L1 -2303 3912 2838 * 1127 275 17 3 chr10 25360753 25361044 -120228244 - L1ME1 LINE L1 -6066 330 36 448 195 107 33 chr10 25361055 25361270 -120228018 + L1ME3A LINE L1 4815 5045 -1599 503 306 184 10 chr10 25361449 25361645 -120227643 + MIR SINE MIR 9 238 -24 225 224 85 85 chr10 25361856 25362079 -120227209 + L1ME3A LINE L1 6227 6449 -219 3932 178 12 40 chr10 25363715 25363806 -120225482 - L1MB3 LINE L1 -8 6175 6083 1743 166 58 22 chr10 25363806 25364168 -120225120 + THE1C LTR MaLR 1 375 0 3932 178 12 40 chr10 25364168 25364892 -120224396 - L1MB3 LINE L1 -100 6083 5383 1720 178 4 0 chr10 25364908 25365183 -120224105 - AluJb SINE Alu -36 276 1 1451 188 87 7 chr10 25365833 25366120 -120223168 - AluJb SINE Alu -2 310 1 937 252 44 0 chr10 25367329 25367535 -120221753 + MER58A DNA MER1_type 1 215 -9 1998 145 0 13 chr10 25367860 25368164 -120221124 + AluJb SINE Alu 1 300 -12 858 272 85 0 chr10 25368662 25368886 -120220402 + MIR SINE MIR 20 262 0 205 286 60 24 chr10 25369274 25369358 -120219930 + L3b LINE CR1 1294 1380 -203 2161 152 55 31 chr10 25370054 25370469 -120218819 - MSTB LTR MaLR -1 425 1 1955 122 0 73 chr10 25370769 25371096 -120218192 + AluSx SINE Alu 3 305 -7 289 250 25 145 chr10 25372284 25372331 -120216957 - MER5B DNA MER1_type 0 189 138 2113 122 27 0 chr10 25372331 25372627 -120216661 - AluSx SINE Alu -8 304 1 289 250 25 145 chr10 25372627 25372779 -120216509 - MER5B DNA MER1_type -51 138 3 2178 202 7 0 chr10 25372875 25373290 -120215998 + MER47B DNA MER2_type 1 418 0 231 223 8 15 chr10 25373290 25373414 -120215874 + (TA)n Simple_repeat Simple_repeat 1 123 0 319 133 0 50 chr10 25373416 25373476 -120215812 + MLT2B1 LTR ERVL 464 520 0 262 291 176 20 chr10 25374424 25374623 -120214665 - MIR SINE MIR -13 249 20 198 148 16 33 chr10 25375100 25375161 -120214127 + (CA)n Simple_repeat Simple_repeat 1 60 0 1677 245 50 39 chr10 25378553 25379226 -120210062 - HAL1 LINE L1 -770 1737 1057 258 32 0 0 chr10 25379669 25379700 -120209588 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 237 65 0 0 chr10 25379806 25379837 -120209451 + (ATG)n Simple_repeat Simple_repeat 2 32 0 752 305 12 31 chr10 25379839 25379982 -120209306 - MIR SINE MIR -8 254 117 1684 138 202 17 chr10 25379982 25380343 -120208945 - MSTA LTR MaLR 0 428 1 752 305 12 31 chr10 25380343 25380455 -120208833 - MIR SINE MIR -145 117 4 198 143 0 0 chr10 25380790 25380825 -120208463 + (CA)n Simple_repeat Simple_repeat 2 36 0 250 267 62 62 chr10 25380917 25381063 -120208225 + MIR SINE MIR 66 211 -51 2066 135 3 0 chr10 25382032 25382328 -120206960 + AluSx SINE Alu 1 297 -15 2480 76 0 0 chr10 25382334 25382638 -120206650 + AluSg SINE Alu 1 304 -6 933 94 0 0 chr10 25382992 25383120 -120206168 - L1PA7 LINE L1 -1 6153 6026 5347 58 6 0 chr10 25383127 25384311 -120204977 - L1PA7 LINE L1 -236 5918 4730 5522 96 9 0 chr10 25384511 25385615 -120203673 - L1PB2 LINE L1 0 6151 5074 276 325 65 32 chr10 25387199 25387213 -120202075 - L2 LINE L2 -7 3265 3253 207 0 0 0 chr10 25387213 25387236 -120202052 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 276 325 65 32 chr10 25387236 25387344 -120201944 - L2 LINE L2 -19 3253 3139 679 261 37 29 chr10 25387761 25388006 -120201282 - L2 LINE L2 -924 2390 2144 2063 157 30 3 chr10 25388204 25388542 -120200746 - MER7A DNA MER2_type 0 346 2 1743 199 0 0 chr10 25388569 25388871 -120200417 + AluJb SINE Alu 2 303 -9 22 0 0 0 chr10 25389534 25389556 -120199732 + AT_rich Low_complexity Low_complexity 1 22 0 808 188 0 0 chr10 25389787 25389936 -120199352 + FRAM SINE Alu 23 171 -5 553 304 75 25 chr10 25390143 25390581 -120198707 + L1MEd LINE L1 569 1028 -5091 1356 158 165 11 chr10 25390588 25390848 -120198440 + AluJo SINE Alu 1 300 -2 1811 170 21 0 chr10 25390855 25391184 -120198104 - L1MB1 LINE L1 -4 6400 6065 10813 192 44 19 chr10 25391184 25393155 -120196133 - L1MB1 LINE L1 -721 5683 3627 2039 85 48 0 chr10 25393155 25393448 -120195840 - AluYa5 SINE Alu 0 306 1 10813 192 44 19 chr10 25393448 25394070 -120195218 - L1MB1 LINE L1 -2777 3627 3022 1133 219 29 33 chr10 25394096 25394338 -120194950 + AluJo SINE Alu 1 241 -71 579 220 69 17 chr10 25394433 25394606 -120194682 - L1MB1 LINE L1 -3402 2980 2799 * 1844 280 37 13 chr10 25394596 25395597 -120193691 - L1MB1 LINE L1 -4024 2358 1257 518 179 36 18 chr10 25395611 25395723 -120193565 - L1M3d LINE L1 -4722 1169 1056 * 43958 42 1 1 chr10 25395721 25401875 -120187413 - L1PA4 LINE L1 0 6155 1 2214 284 58 40 chr10 25401875 25403386 -120185902 - L1M3d LINE L1 -4819 1072 1 1669 162 0 8 chr10 25403419 25403684 -120185604 - AluJo SINE Alu -10 302 40 434 280 10 31 chr10 25403686 25403879 -120185409 + L1MEd LINE L1 1025 1213 -4906 29 70 0 0 chr10 25405449 25405506 -120183782 + AT_rich Low_complexity Low_complexity 1 57 0 1664 194 0 10 chr10 25405619 25405908 -120183380 - AluJo SINE Alu -22 290 5 193 319 50 34 chr10 25406288 25406407 -120182881 - L2 LINE L2 -557 2757 2637 1367 167 4 4 chr10 25406445 25406672 -120182616 + AluJb SINE Alu 86 312 0 392 267 95 50 chr10 25406828 25407090 -120182198 - L2 LINE L2 -822 2492 2219 204 333 155 14 chr10 25407250 25407547 -120181741 + L3 LINE CR1 1233 1571 -6 2082 117 0 30 chr10 25407645 25407974 -120181314 + AluSx SINE Alu 1 312 0 1692 199 16 0 chr10 25408245 25408582 -120180706 - AluJb SINE Alu 0 342 1 414 0 0 0 chr10 25408703 25408749 -120180539 + (CA)n Simple_repeat Simple_repeat 2 47 0 281 130 65 0 chr10 25408926 25408972 -120180316 - AluJ/FRAM SINE Alu -26 276 228 2333 105 0 0 chr10 25409183 25409487 -120179801 - AluSx SINE Alu -8 304 1 284 289 62 39 chr10 25410168 25410296 -120178992 - MIR3 SINE MIR -68 140 10 2107 150 0 10 chr10 25410446 25410760 -120178528 - AluSx SINE Alu -1 311 1 6276 116 20 5 chr10 25410762 25411727 -120177561 - L1PA11 LINE L1 -8 6166 5198 242 318 204 0 chr10 25412127 25412259 -120177029 + MIR3 SINE MIR 47 205 -3 1520 121 70 0 chr10 25415196 25415411 -120173877 + MER30 DNA MER1_type 1 230 0 6230 89 11 8 chr10 25415813 25416682 -120172606 - L1PA10 LINE L1 0 6168 5297 181 379 0 0 chr10 25416935 25417001 -120172287 + MIR SINE MIR 52 117 -145 24 32 0 0 chr10 25417286 25417317 -120171971 + AT_rich Low_complexity Low_complexity 1 31 0 314 358 94 20 chr10 25417325 25417579 -120171709 - L2 LINE L2 -800 2514 2242 905 273 38 73 chr10 25417595 25417991 -120171297 + L2 LINE L2 2932 3313 0 233 172 86 0 chr10 25417990 25418048 -120171240 - MIR SINE MIR -19 243 181 * 504 308 40 12 chr10 25418064 25418311 -120170977 - L2 LINE L2 -1093 2221 1968 2569 33 3 3 chr10 25418489 25418791 -120170497 - AluY SINE Alu -9 302 1 1880 170 0 0 chr10 25419274 25419562 -120169726 + AluJb SINE Alu 6 293 -19 381 117 0 0 chr10 25421829 25421889 -120167399 + (TA)n Simple_repeat Simple_repeat 2 61 0 7961 35 0 0 chr10 25421889 25423310 -120165978 - L1PA5 LINE L1 -12 6142 4718 2419 72 3 0 chr10 25423310 25423616 -120165672 + L1PA5 LINE L1 4430 4736 -1410 1795 166 0 40 chr10 25423733 25424058 -120165230 - AluJo SINE Alu 0 312 1 248 325 98 44 chr10 25425556 25425944 -120163344 + L2 LINE L2 1496 1904 -1410 264 268 107 13 chr10 25425944 25426469 -120162819 + L1MD3 LINE L1 5589 6092 -74 445 31 16 16 chr10 25426469 25426533 -120162755 + (TG)n Simple_repeat Simple_repeat 1 64 0 264 268 107 13 chr10 25426533 25426583 -120162705 + L1MD3 LINE L1 6092 6136 -30 1659 179 14 21 chr10 25426583 25426740 -120162548 - AluJb SINE Alu -23 289 132 207 0 0 0 chr10 25426740 25426763 -120162525 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2095 118 0 3 chr10 25426763 25427050 -120162238 - AluSq SINE Alu -27 286 1 1659 179 14 21 chr10 25427050 25427181 -120162107 - AluJb SINE Alu -178 134 2 6265 21 0 0 chr10 25427231 25427903 -120161385 - L1PA3 LINE L1 -3 6152 5481 8487 54 0 8 chr10 25427903 25428961 -120160327 - L1P LINE L1 -5090 1056 7 1110 326 106 41 chr10 25429024 25429404 -120159884 + L2 LINE L2 1965 2319 -953 1616 188 10 17 chr10 25429404 25429696 -120159592 + AluJo SINE Alu 3 292 -20 1110 326 106 41 chr10 25429696 25430537 -120158751 + L2 LINE L2 2319 3263 -9 1491 200 46 14 chr10 25430848 25431133 -120158155 + AluJo SINE Alu 1 294 -18 324 0 0 0 chr10 25432303 25432339 -120156949 + (TG)n Simple_repeat Simple_repeat 2 37 0 1019 152 24 30 chr10 25432383 25432548 -120156740 + AluJo SINE Alu 105 268 -44 210 37 0 0 chr10 25432724 25432751 -120156537 + (TTTTTA)n Simple_repeat Simple_repeat 2 28 0 3127 68 5 0 chr10 25432766 25433148 -120156140 - L1PA6 LINE L1 -1 6153 5770 230 0 33 0 chr10 25433148 25433178 -120156110 + (TA)n Simple_repeat Simple_repeat 1 31 0 2403 22 0 7 chr10 25433177 25433440 -120155848 - L1PA5 LINE L1 -3 6151 5884 248 0 0 30 chr10 25434626 25434659 -120154629 + (CAAAA)n Simple_repeat Simple_repeat 4 35 0 296 256 13 0 chr10 25435237 25435315 -120153973 + MER116 DNA Mariner 1 79 -1 856 209 41 0 chr10 25435464 25435636 -120153652 + L1MB7 LINE L1 5987 6165 -19 4415 211 33 16 chr10 25435639 25436374 -120152914 + L1MC/D LINE L1 4157 4924 -1340 2729 118 3 0 chr10 25436374 25436737 -120152551 + THE1B LTR MaLR 1 364 0 4415 211 33 16 chr10 25436737 25437344 -120151944 + L1MC/D LINE L1 4924 5519 -745 642 221 59 45 chr10 25437328 25437550 -120151738 + L1MC1 LINE L1 4664 4888 -1258 * 561 68 14 0 chr10 25437550 25437623 -120151665 + THE1C LTR MaLR 1 74 -301 4685 154 29 18 chr10 25437626 25438423 -120150865 + L1MC1 LINE L1 5528 6333 0 315 0 0 0 chr10 25438637 25438672 -120150616 + (ATG)n Simple_repeat Simple_repeat 3 37 0 452 233 39 39 chr10 25439262 25439391 -120149897 - L2 LINE L2 0 3313 3185 1173 220 86 78 chr10 25439729 25440216 -120149072 + MLT1J LTR MaLR 2 492 -19 210 37 0 0 chr10 25440429 25440456 -120148832 + (TTGG)n Simple_repeat Simple_repeat 2 28 0 5953 102 7 0 chr10 25440459 25441271 -120148017 - L1PA15 LINE L1 -1 6164 5347 205 350 21 10 chr10 25442148 25442245 -120147043 + L3 LINE CR1 349 446 -1131 1979 128 4 0 chr10 25442405 25442709 -120146579 - AluSx SINE Alu 0 305 1 897 188 12 0 chr10 25443445 25443610 -120145678 - AluJb SINE Alu -13 299 133 1671 151 6 111 chr10 25445343 25445675 -120143613 - AluJo SINE Alu -1 301 5 1435 177 157 48 chr10 25446002 25446153 -120143135 + MLT1C LTR MaLR 1 134 -492 2242 71 0 7 chr10 25446153 25446464 -120142824 - AluY SINE Alu 0 309 1 1435 177 157 48 chr10 25446464 25446726 -120142562 + MLT1C LTR MaLR 134 619 -7 901 187 35 6 chr10 25447418 25447589 -120141699 - MER45A DNA AcHobo 0 178 3 795 86 9 0 chr10 25447819 25447924 -120141364 + L1PA4 LINE L1 6042 6147 -8 268 308 13 0 chr10 25448102 25448180 -120141108 - L2 LINE L2 -25 3247 3169 515 317 135 20 chr10 25448237 25448824 -120140464 + L2 LINE L2 2645 3303 -10 338 271 21 21 chr10 25449334 25449430 -120139858 + MER81 DNA DNA 1 96 -18 725 207 1 2 chr10 25449912 25450057 -120139231 - MER58B DNA MER1_type -1 340 197 449 152 0 0 chr10 25450038 25450104 -120139184 + MER58B DNA MER1_type 264 329 -12 * 537 165 0 0 chr10 25450115 25450194 -120139094 - MER58A DNA MER1_type -28 79 1 2071 79 4 32 chr10 25450614 25450893 -120138395 - AluSp SINE Alu -20 293 23 1807 145 34 24 chr10 25450936 25451232 -120138056 + AluJb SINE Alu 1 299 -13 942 143 30 6 chr10 25451575 25451743 -120137545 + L1PA15 LINE L1 5994 6165 0 3153 115 31 4 chr10 25455579 25456032 -120133256 - L1PA16 LINE L1 -3 6163 5699 336 381 69 6 chr10 25456192 25456352 -120132936 - MIR3 SINE MIR -25 183 14 21 36 0 0 chr10 25456380 25456408 -120132880 + AT_rich Low_complexity Low_complexity 1 28 0 210 122 61 20 chr10 25456459 25456508 -120132780 + (TATAA)n Simple_repeat Simple_repeat 2 52 0 291 28 0 0 chr10 25456705 25456741 -120132547 + (TG)n Simple_repeat Simple_repeat 1 36 0 543 300 95 24 chr10 25456777 25457176 -120132112 - L1ME3A LINE L1 -206 6196 5755 772 241 35 11 chr10 25457176 25457350 -120131938 + MER5B DNA MER1_type 1 178 0 543 300 95 24 chr10 25457350 25457431 -120131857 - L1ME3A LINE L1 -647 5755 5681 496 324 61 39 chr10 25457539 25457869 -120131419 - L1ME3A LINE L1 -904 5478 5142 23 54 0 0 chr10 25457921 25457958 -120131330 + AT_rich Low_complexity Low_complexity 1 37 0 696 286 78 20 chr10 25457958 25458510 -120130778 - L1ME3A LINE L1 -1890 4488 3839 2209 116 7 0 chr10 25458570 25458862 -120130426 + AluSg SINE Alu 1 294 -16 378 0 0 0 chr10 25458901 25458943 -120130345 + (TG)n Simple_repeat Simple_repeat 1 42 0 324 313 86 25 chr10 25458946 25459144 -120130144 - L1ME3A LINE L1 -2643 3739 3530 410 312 28 28 chr10 25459382 25459629 -120129659 - L1ME3A LINE L1 -4749 1635 1389 474 304 108 27 chr10 25459648 25460287 -120129001 - L1ME3A LINE L1 -4910 1462 772 287 289 66 79 chr10 25460422 25460650 -120128638 - L1ME3A LINE L1 -5864 508 284 586 143 0 0 chr10 25463760 25463844 -120125444 - FRAM SINE Alu -26 150 67 1059 273 78 18 chr10 25465499 25465894 -120123394 - MLT1J2 LTR MaLR -31 419 1 2058 151 3 0 chr10 25466869 25467167 -120122121 + AluSx SINE Alu 1 299 -13 1899 166 0 10 chr10 25468159 25468455 -120120833 - AluJo SINE Alu -19 293 1 314 282 0 0 chr10 25468654 25468725 -120120563 + MIR SINE MIR 84 154 -108 369 285 127 36 chr10 25470423 25470676 -120118612 + MARNA DNA Mariner 269 544 -42 27 29 0 0 chr10 25471540 25471574 -120117714 + AT_rich Low_complexity Low_complexity 1 34 0 1595 191 27 3 chr10 25471726 25472025 -120117263 - AluJo SINE Alu -6 306 1 341 381 62 14 chr10 25472072 25472361 -120116927 - L1ME4a LINE L1 -236 5885 5583 398 308 65 32 chr10 25472886 25473119 -120116169 - L1ME4a LINE L1 -1219 4927 4681 507 339 18 41 chr10 25473133 25473320 -120115968 + MIR SINE MIR 15 198 -64 2673 179 89 54 chr10 25473320 25473656 -120115632 - MER44D DNA MER2_type -1882 605 357 2036 117 10 3 chr10 25473656 25473956 -120115332 + AluY SINE Alu 1 302 -9 2673 179 89 54 chr10 25473956 25474327 -120114961 - MER44D DNA MER2_type -2130 357 1 507 339 18 41 chr10 25474327 25474360 -120114928 + MIR SINE MIR 198 230 -32 317 291 211 36 chr10 25474527 25474774 -120114514 + L1MDa LINE L1 40 329 -6211 245 225 0 108 chr10 25475256 25475367 -120113921 + L1MDa LINE L1 909 1007 -5536 492 77 0 0 chr10 25475381 25475446 -120113842 + MLT1A1 LTR MaLR 247 311 -54 476 126 6 6 chr10 25475488 25475582 -120113706 + MLT1A1 LTR MaLR 296 365 0 1349 129 26 33 chr10 25475582 25475854 -120113434 - Charlie5 DNA MER1_type -110 2502 2233 765 133 0 16 chr10 25476064 25476192 -120113096 + L1PB4 LINE L1 6031 6156 0 2241 96 14 7 chr10 25476845 25477138 -120112150 - AluSx SINE Alu -17 295 1 1897 161 45 34 chr10 25479084 25479629 -120109659 - MLT2A2 LTR ERVL -1 553 2 1315 167 14 0 chr10 25480063 25480285 -120109003 + AluJb SINE Alu 85 309 -3 225 0 0 0 chr10 25480582 25480607 -120108681 + (A)n Simple_repeat Simple_repeat 1 25 0 189 149 0 164 chr10 25480612 25480679 -120108609 - MER5A DNA MER1_type -75 114 59 2230 113 33 0 chr10 25481136 25481438 -120107850 + AluSx SINE Alu 1 312 0 2526 140 16 21 chr10 25481962 25482390 -120106898 + MSTB LTR MaLR 1 426 0 1989 140 3 16 chr10 25482751 25483059 -120106229 - AluSx SINE Alu -8 304 1 29 47 0 0 chr10 25483151 25483194 -120106094 + AT_rich Low_complexity Low_complexity 1 43 0 1252 145 69 28 chr10 25483194 25483483 -120105805 + L1MA4 LINE L1 6000 6300 0 2145 130 10 0 chr10 25483583 25483890 -120105398 - AluSq SINE Alu -3 310 1 205 270 96 35 chr10 25484849 25484964 -120104324 - MIR SINE MIR -56 206 85 642 254 62 31 chr10 25485327 25485520 -120103768 - MIR3 SINE MIR -7 201 3 183 129 0 0 chr10 25485624 25485655 -120103633 + (TCCC)n Simple_repeat Simple_repeat 4 34 0 1821 134 3 59 chr10 25487420 25487534 -120101754 + AluJo SINE Alu 14 133 -179 2722 10 0 0 chr10 25487534 25487832 -120101456 - AluYa5 SINE Alu -13 298 1 1821 134 3 59 chr10 25487832 25488022 -120101266 + AluJo SINE Alu 133 301 -11 227 217 101 0 chr10 25488026 25488095 -120101193 + MIR SINE MIR 139 214 -48 315 206 0 0 chr10 25488098 25488161 -120101127 + L1MB3 LINE L1 5906 5968 -203 1295 134 0 6 chr10 25488168 25488347 -120100941 + AluSx SINE Alu 1 178 -134 844 120 0 0 chr10 25488402 25488519 -120100769 + AluSx SINE Alu 181 297 -13 1011 172 14 9 chr10 25488520 25488735 -120100553 + L1MB3 LINE L1 5960 6175 -8 559 293 0 58 chr10 25488925 25489099 -120100189 - MIR3 SINE MIR -22 186 23 2076 127 3 7 chr10 25489114 25489413 -120099875 + AluSx SINE Alu 1 298 -14 403 208 13 67 chr10 25489542 25489594 -120099694 - L1MA10 LINE L1 0 6334 6283 1130 272 59 2 chr10 25489594 25490032 -120099256 - L1ME2 LINE L1 -34 6130 5668 1941 223 58 23 chr10 25490038 25490554 -120098734 + MER74A LTR ERVL 1 534 -24 1380 229 47 3 chr10 25490582 25491175 -120098113 - L1ME2 LINE L1 -507 5659 5039 653 243 76 5 chr10 25491186 25491396 -120097892 + L1ME LINE L1 5330 5554 -612 507 153 126 0 chr10 25492927 25493038 -120096250 + L1ME LINE L1 5542 5666 -500 2167 88 0 14 chr10 25493073 25493369 -120095919 + AluY SINE Alu 1 292 -19 1759 209 50 53 chr10 25493428 25494090 -120095198 - L1ME2 LINE L1 -1131 5015 4356 1835 215 80 48 chr10 25496177 25496702 -120092586 - MLT1F LTR MaLR 0 542 1 374 327 18 18 chr10 25496807 25496972 -120092316 + MIR3 SINE MIR 31 195 -13 663 164 0 49 chr10 25497454 25497576 -120091712 + FLAM_A SINE Alu 5 120 -13 25 31 0 0 chr10 25497576 25497608 -120091680 + AT_rich Low_complexity Low_complexity 1 32 0 718 299 85 15 chr10 25497789 25498141 -120091147 + L2 LINE L2 2899 3313 0 1024 174 58 47 chr10 25499918 25500029 -120089259 + L1MA4 LINE L1 6022 6130 -170 1725 153 49 17 chr10 25500029 25500316 -120088972 + AluSx SINE Alu 1 296 -16 1024 174 58 47 chr10 25500316 25500479 -120088809 + L1MA4 LINE L1 6130 6299 -1 354 45 0 0 chr10 25500846 25500890 -120088398 + (TG)n Simple_repeat Simple_repeat 2 45 0 1296 185 182 3 chr10 25501318 25501631 -120087657 - MSTD LTR MaLR 0 396 28 358 274 154 10 chr10 25501787 25501988 -120087300 - MIR SINE MIR 0 262 33 206 284 59 39 chr10 25502839 25502941 -120086347 + L2 LINE L2 2793 2896 -418 256 261 270 0 chr10 25502997 25503108 -120086180 + L2 LINE L2 3105 3245 -68 1818 105 67 8 chr10 25505096 25505414 -120083874 + AluSp SINE Alu 1 334 0 605 318 14 14 chr10 25505464 25505675 -120083613 - MIR SINE MIR -15 247 37 867 313 19 0 chr10 25505985 25506241 -120083047 + MIR SINE MIR 2 262 0 3467 114 4 52 chr10 25506549 25507103 -120082185 + MER1A DNA MER1_type 1 527 0 184 286 0 0 chr10 25507298 25507340 -120081948 + MIR SINE MIR 205 246 -16 792 224 33 17 chr10 25508056 25508264 -120081024 + MLT1C LTR MaLR 272 464 -3 2279 87 2 107 chr10 25508298 25508426 -120080862 - L1PB1 LINE L1 0 6151 6011 201 39 0 0 chr10 25508426 25508452 -120080836 + (TTG)n Simple_repeat Simple_repeat 1 26 0 1956 126 3 18 chr10 25508452 25508738 -120080550 - AluSx SINE Alu -30 282 1 2279 87 2 107 chr10 25508738 25509009 -120080279 - L1PB1 LINE L1 -138 6013 5793 222 118 0 0 chr10 25509009 25509043 -120080245 + (TG)n Simple_repeat Simple_repeat 2 35 0 644 130 46 0 chr10 25509048 25509156 -120080132 - L1PB1 LINE L1 -251 5900 5788 8690 159 56 44 chr10 25509156 25510830 -120078458 - pTR5 LTR ERV1 -3 2435 743 360 0 0 0 chr10 25510835 25510875 -120078413 + (TA)n Simple_repeat Simple_repeat 2 41 0 1269 140 26 50 chr10 25510907 25511166 -120078122 - L1MC2 LINE L1 -328 5793 5583 223 304 14 0 chr10 25511888 25511957 -120077331 - MIR SINE MIR -72 190 121 903 212 113 92 chr10 25512551 25512797 -120076491 - MER34 LTR ERV1 0 542 303 2284 118 98 28 chr10 25512797 25513156 -120076132 + MSTA LTR MaLR 1 392 -36 1977 140 7 3 chr10 25513156 25513464 -120075824 - AluSx SINE Alu -3 309 1 2284 118 98 28 chr10 25513464 25513504 -120075784 + MSTA LTR MaLR 392 428 0 903 212 113 92 chr10 25513504 25513798 -120075490 - MER34 LTR ERV1 -239 303 1 1518 124 0 0 chr10 25513854 25514071 -120075217 - AluSg/x SINE Alu -3 309 93 767 314 125 39 chr10 25514619 25515512 -120073776 - L2 LINE L2 0 3272 2301 1840 126 0 21 chr10 25515731 25516016 -120073272 + AluSx SINE Alu 1 279 -33 306 0 0 0 chr10 25516016 25516050 -120073238 + (CA)n Simple_repeat Simple_repeat 1 34 0 2432 188 58 0 chr10 25516454 25516885 -120072403 + MSTB2 LTR MaLR 2 457 0 210 233 14 27 chr10 25516951 25517024 -120072264 + CT-rich Low_complexity Low_complexity 1 72 0 838 309 61 31 chr10 25517191 25517550 -120071738 - L3 LINE CR1 -62 1515 1146 1971 139 0 0 chr10 25519090 25519384 -120069904 + AluSq SINE Alu 1 294 -19 983 163 6 0 chr10 25519387 25519553 -120069735 + AluSg/x SINE Alu 126 292 -18 510 283 134 10 chr10 25519683 25519973 -120069315 - HAL1b LINE L1 -586 762 437 314 280 47 89 chr10 25520023 25520185 -120069103 - HAL1 LINE L1 -1167 1340 1190 1894 146 3 0 chr10 25520185 25520486 -120068802 + AluSx SINE Alu 1 302 -10 314 280 47 89 chr10 25520486 25520559 -120068729 - HAL1 LINE L1 -1317 1190 1115 2166 103 3 0 chr10 25521185 25521485 -120067803 + AluSp SINE Alu 1 301 -12 1860 125 48 0 chr10 25521492 25521781 -120067507 + AluSx SINE Alu 1 303 -9 2415 74 0 3 chr10 25522400 25522711 -120066577 + AluY SINE Alu 1 310 -1 406 262 24 16 chr10 25522711 25522837 -120066451 + MIR SINE MIR 117 243 -19 21 36 0 0 chr10 25523005 25523033 -120066255 + AT_rich Low_complexity Low_complexity 1 28 0 2313 178 29 43 chr10 25523082 25523309 -120065979 - MER39 LTR ERV1 0 707 478 1713 158 0 29 chr10 25523309 25523620 -120065668 + AluJo SINE Alu 1 302 -10 2313 178 29 43 chr10 25523620 25523899 -120065389 - MER39 LTR ERV1 -229 478 5 1551 174 52 0 chr10 25524488 25524775 -120064513 + AluJb SINE Alu 1 302 -10 1153 96 128 41 chr10 25524956 25525175 -120064113 + L1MA1 LINE L1 6065 6302 0 739 249 70 91 chr10 25525294 25525336 -120063952 - MER39 LTR ERV1 -65 584 543 1882 130 35 0 chr10 25525336 25525620 -120063668 - AluSx SINE Alu -18 294 1 739 249 70 91 chr10 25525620 25526054 -120063234 - MER39 LTR ERV1 -106 543 1 1548 199 3 13 chr10 25526354 25526656 -120062632 - AluJo SINE Alu -11 301 3 828 137 0 46 chr10 25526670 25526801 -120062487 - FLAM_C SINE Alu -8 125 1 405 0 0 0 chr10 25527378 25527423 -120061865 + (CA)n Simple_repeat Simple_repeat 2 46 0 2062 127 3 0 chr10 25527482 25527782 -120061506 + AluSx SINE Alu 1 301 -11 983 163 6 0 chr10 25527987 25528153 -120061135 - AluSg/x SINE Alu -18 292 126 1971 139 0 0 chr10 25528156 25528450 -120060838 - AluSq SINE Alu -19 294 1 838 309 61 31 chr10 25529990 25530349 -120058939 + L3 LINE CR1 1146 1515 -62 210 233 14 27 chr10 25530516 25530589 -120058699 + GA-rich Low_complexity Low_complexity 1 72 0 2432 188 58 0 chr10 25530655 25531086 -120058202 - MSTB2 LTR MaLR 0 457 2 306 0 0 0 chr10 25531490 25531524 -120057764 + (TG)n Simple_repeat Simple_repeat 1 34 0 1038 130 35 30 chr10 25531524 25531724 -120057564 - AluSg/x SINE Alu -33 277 77 180 77 0 0 chr10 25531837 25531863 -120057425 + (TTCC)n Simple_repeat Simple_repeat 1 26 0 509 229 0 0 chr10 25531864 25531969 -120057319 - FLAM_A SINE Alu -37 105 1 1292 161 6 114 chr10 25532050 25532391 -120056897 - AluJb SINE Alu -8 304 1 375 257 133 40 chr10 25532584 25532810 -120056478 + LTR33 LTR ERVL 271 517 -4 1665 148 7 24 chr10 25533330 25533620 -120055668 + AluJo SINE Alu 1 285 -27 324 0 0 0 chr10 25533620 25533656 -120055632 + (CA)n Simple_repeat Simple_repeat 2 37 0 326 192 90 0 chr10 25533669 25533747 -120055541 + MER53 DNA DNA 105 189 0 401 217 0 0 chr10 25534414 25534483 -120054805 - L2 LINE L2 0 3313 3245 762 171 0 0 chr10 25536022 25536145 -120053143 + AluJ SINE Alu 11 133 -179 331 314 11 59 chr10 25536226 25536497 -120052791 + MLT1J LTR MaLR 3 260 -251 1393 139 0 0 chr10 25537151 25537360 -120051928 + AluSg/x SINE Alu 92 300 -10 751 185 6 67 chr10 25537385 25537563 -120051725 + AluJ SINE Alu 118 284 -28 771 267 19 77 chr10 25538439 25538486 -120050802 - MLT1A1 LTR MaLR -2 363 315 2121 110 7 0 chr10 25538486 25538794 -120050494 - AluSx SINE Alu -2 310 1 771 267 19 77 chr10 25538794 25539109 -120050179 - MLT1A1 LTR MaLR -50 315 22 1775 121 0 27 chr10 25539909 25540207 -120049081 - AluSx SINE Alu -22 290 1 265 284 8 30 chr10 25540519 25540653 -120048635 + CT-rich Low_complexity Low_complexity 4 134 0 382 214 12 0 chr10 25541070 25541154 -120048134 + L1MB1 LINE L1 6060 6144 -24 225 0 0 0 chr10 25541154 25541179 -120048109 + (TG)n Simple_repeat Simple_repeat 2 26 0 787 223 29 6 chr10 25541365 25541540 -120047748 - MIR SINE MIR -61 201 23 26 64 0 0 chr10 25542407 25542454 -120046834 + AT_rich Low_complexity Low_complexity 1 47 0 1525 274 29 35 chr10 25542578 25543089 -120046199 + MLT1E3 LTR MaLR 26 533 -91 249 258 117 62 chr10 25543704 25543832 -120045456 + L1MC/D LINE L1 5620 5754 -2054 1315 216 3 30 chr10 25544195 25544496 -120044792 + AluJo SINE Alu 1 293 -19 1404 126 0 23 chr10 25545041 25545256 -120044032 - AluSx SINE Alu -102 210 1 277 219 16 16 chr10 25545508 25545572 -120043716 - MER20B DNA MER1_type -696 87 24 188 325 136 26 chr10 25548741 25548895 -120040393 - L2 LINE L2 -993 2321 2151 680 264 72 48 chr10 25549140 25549182 -120040106 + MIR SINE MIR 1 41 -221 809 208 141 14 chr10 25549182 25549466 -120039822 + MER33 DNA MER1_type 5 324 0 680 264 72 48 chr10 25549466 25549673 -120039615 + MIR SINE MIR 41 256 -6 2398 78 0 0 chr10 25549674 25549981 -120039307 - AluSx SINE Alu -1 311 5 856 166 43 11 chr10 25552784 25552971 -120036317 + MER63 DNA MER1_type 12 204 -857 1548 199 3 13 chr10 25553704 25554006 -120035282 - AluJo SINE Alu -11 301 3 828 137 0 46 chr10 25554020 25554151 -120035137 - FLAM_C SINE Alu -8 125 1 966 84 15 0 chr10 25554572 25554703 -120034585 - AluSq/x SINE Alu -180 133 1 354 98 0 0 chr10 25556051 25556102 -120033186 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 1917 121 4 0 chr10 25556107 25556380 -120032908 - AluSg SINE Alu -36 274 1 408 127 25 14 chr10 25556955 25557041 -120032247 + AluS SINE Alu 1 60 -243 431 187 36 92 chr10 25557333 25557584 -120031704 + AluSg1 SINE Alu 5 241 -68 233 384 53 8 chr10 25557608 25557741 -120031547 - L2 LINE L2 -12 3260 3122 1592 176 0 40 chr10 25557949 25558272 -120031016 + AluJo SINE Alu 1 310 -2 670 128 0 20 chr10 25558431 25558533 -120030755 - MSTC LTR MaLR -327 101 2 698 209 0 53 chr10 25559264 25559451 -120029837 + FRAM SINE Alu 1 176 0 372 290 97 39 chr10 25559520 25559727 -120029561 + Charlie8 DNA MER1_type 103 321 -2096 2096 128 3 19 chr10 25560054 25560367 -120028921 + AluSx SINE Alu 1 308 -4 833 195 30 61 chr10 25560376 25560607 -120028681 + AluJb SINE Alu 85 308 -4 312 27 0 0 chr10 25561793 25561830 -120027458 + (TG)n Simple_repeat Simple_repeat 1 37 0 1875 85 25 2 chr10 25563553 25563829 -120025459 - L1PA8 LINE L1 -183 5989 5709 1683 160 16 26 chr10 25565155 25565462 -120023826 + AluJo SINE Alu 1 304 -8 321 330 0 0 chr10 25565468 25565571 -120023717 - MER5A DNA MER1_type -83 106 4 1313 169 8 16 chr10 25567787 25568029 -120021259 + THE1A LTR MaLR 1 240 -115 214 234 0 31 chr10 25568562 25568626 -120020662 + (TATG)n Simple_repeat Simple_repeat 2 63 0 2346 117 0 3 chr10 25568750 25569059 -120020229 + AluSx SINE Alu 2 309 -3 1439 133 0 0 chr10 25569910 25570120 -120019168 - MSTC LTR MaLR -218 210 1 1507 123 8 41 chr10 25570748 25570992 -120018296 + MER46A DNA MER2_type 1 236 0 1617 108 23 0 chr10 25571031 25571245 -120018043 + AluSx SINE Alu 1 219 -93 352 170 0 0 chr10 25571346 25571399 -120017889 - AluS SINE Alu -233 68 16 242 279 15 0 chr10 25571486 25571554 -120017734 - MIR SINE MIR -176 86 18 799 208 0 40 chr10 25571767 25571940 -120017348 + FRAM SINE Alu 8 173 -3 1924 139 17 7 chr10 25572399 25572693 -120016595 - AluSx SINE Alu -15 297 1 540 279 77 37 chr10 25574977 25575274 -120014014 - L2 LINE L2 0 3313 3005 187 244 35 116 chr10 25576930 25577016 -120012272 + L3 LINE CR1 1363 1441 -136 543 260 60 97 chr10 25577025 25577227 -120012061 - L2 LINE L2 0 3313 3105 925 138 26 62 chr10 25577227 25577422 -120011866 + MER53 DNA DNA 2 189 0 543 260 60 97 chr10 25577422 25577709 -120011579 - L2 LINE L2 -208 3105 2739 1219 138 94 0 chr10 25577717 25577888 -120011400 - AluJo SINE Alu -2 310 116 582 28 0 0 chr10 25577888 25577960 -120011328 + (TATTG)n Simple_repeat Simple_repeat 2 73 0 1219 138 94 0 chr10 25577960 25577991 -120011297 - AluJo SINE Alu -196 116 89 444 313 24 14 chr10 25578004 25578212 -120011076 - L2 LINE L2 -601 2713 2504 287 164 91 0 chr10 25578215 25578270 -120011018 + AluJo SINE Alu 90 149 -153 991 127 58 5 chr10 25578547 25578752 -120010536 - AluY SINE Alu -95 216 1 1739 177 10 10 chr10 25578752 25579057 -120010231 - AluJo SINE Alu -6 306 2 1276 164 5 14 chr10 25579752 25579959 -120009329 + AluJo SINE Alu 3 207 -105 672 76 54 0 chr10 25580385 25580477 -120008811 - MER41B LTR ERV1 -4 631 535 1034 129 5 86 chr10 25580479 25580665 -120008623 - AluSg/x SINE Alu 0 312 142 2294 117 0 0 chr10 25580867 25581174 -120008114 - AluY SINE Alu -3 308 2 2033 96 0 74 chr10 25581175 25581498 -120007790 - AluSq SINE Alu -14 299 1 517 195 65 0 chr10 25581946 25582069 -120007219 + MER94 DNA DNA 1 131 -3 22 56 0 0 chr10 25582181 25582217 -120007071 + AT_rich Low_complexity Low_complexity 1 36 0 2451 63 0 7 chr10 25583740 25584041 -120005247 - AluY SINE Alu -12 299 1 1902 133 10 20 chr10 25584363 25584664 -120004624 - AluJo SINE Alu -10 302 5 195 69 0 0 chr10 25585566 25585595 -120003693 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 1962 107 0 49 chr10 25587049 25587376 -120001912 + AluY SINE Alu 1 311 0 423 160 0 0 chr10 25587923 25587998 -120001290 + (TG)n Simple_repeat Simple_repeat 2 76 0 698 202 0 0 chr10 25588309 25588428 -120000860 - FLAM_A SINE Alu -10 123 5 296 240 156 10 chr10 25588523 25588619 -120000669 - MER81 DNA DNA 0 114 5 2051 145 0 0 chr10 25588973 25589269 -120000019 + AluSx SINE Alu 1 296 -16 698 157 0 0 chr10 25590897 25591005 -119998283 + FLAM_C SINE Alu 2 109 -34 3391 65 11 11 chr10 25592106 25592552 -119996736 - MER41A LTR ERV1 -108 446 1 856 156 0 120 chr10 25592997 25593189 -119996099 - AluJb SINE Alu -8 304 136 1737 119 95 41 chr10 25593614 25593909 -119995379 - AluSx SINE Alu -1 311 1 1970 161 0 0 chr10 25594282 25594586 -119994702 - AluJo SINE Alu -8 304 1 186 43 0 0 chr10 25596244 25596267 -119993021 + (CA)n Simple_repeat Simple_repeat 1 23 0 372 22 0 0 chr10 25597308 25597353 -119991935 + (TG)n Simple_repeat Simple_repeat 2 46 0 347 299 82 8 chr10 25598194 25598328 -119990960 + MIR SINE MIR 48 191 -71 1801 127 38 31 chr10 25598490 25598781 -119990507 - AluJb SINE Alu -19 293 1 224 175 0 0 chr10 25598794 25598834 -119990454 - MIR SINE MIR -114 148 109 24 0 0 0 chr10 25599002 25599026 -119990262 + AT_rich Low_complexity Low_complexity 1 24 0 5369 116 51 4 chr10 25599755 25600753 -119988535 - L1PA16 LINE L1 -1 6165 5111 1924 169 19 16 chr10 25600902 25601274 -119988014 - L1PB4 LINE L1 -3 6153 5781 238 271 13 0 chr10 25601278 25601429 -119987859 + (TA)n Simple_repeat Simple_repeat 1 153 0 2059 148 3 0 chr10 25602188 25602499 -119986789 - AluSx SINE Alu 0 312 1 1521 214 3 23 chr10 25603273 25603572 -119985716 - AluJb SINE Alu -19 293 1 245 258 117 62 chr10 25603935 25604063 -119985225 - L1MC/D LINE L1 -2054 5754 5620 1793 167 17 0 chr10 25604371 25604658 -119984630 + AluSx SINE Alu 2 293 -19 183 80 0 0 chr10 25604749 25604774 -119984514 + (TTTTC)n Simple_repeat Simple_repeat 1 25 0 842 64 0 0 chr10 25604797 25604907 -119984381 - L1PA13 LINE L1 -3 6160 6051 813 121 0 57 chr10 25604924 25605064 -119984224 - FLAM_C SINE Alu -11 132 1 2304 84 0 17 chr10 25605149 25605447 -119983841 + AluY SINE Alu 1 293 -18 2587 68 3 0 chr10 25606023 25606332 -119982956 + AluSq SINE Alu 1 310 -3 372 96 5 35 chr10 25608074 25608140 -119981148 - Alu SINE Alu -9 293 240 24 32 0 0 chr10 25608545 25608576 -119980712 + AT_rich Low_complexity Low_complexity 1 31 0 1015 179 0 22 chr10 25609076 25609260 -119980028 + AluJb SINE Alu 133 312 0 340 254 40 48 chr10 25609599 25609725 -119979563 - MIR3 SINE MIR -52 156 32 2264 107 0 3 chr10 25610168 25610466 -119978822 - AluSx SINE Alu -15 297 1 207 0 0 0 chr10 25611358 25611381 -119977907 + (A)n Simple_repeat Simple_repeat 1 23 0 254 338 106 7 chr10 25612910 25613061 -119976227 - MIR3 SINE MIR -3 205 40 944 201 0 0 chr10 25613343 25613492 -119975796 + AluJb SINE Alu 134 282 -30 224 211 0 0 chr10 25613604 25613656 -119975632 + (CA)n Simple_repeat Simple_repeat 1 52 0 2693 36 0 3 chr10 25613895 25614204 -119975084 - AluY SINE Alu -3 308 1 1405 224 0 14 chr10 25614651 25614937 -119974351 + AluJo SINE Alu 12 293 -19 1684 170 31 14 chr10 25615778 25616072 -119973216 + AluJo SINE Alu 1 299 -13 2080 137 7 0 chr10 25616526 25616825 -119972463 + AluSx SINE Alu 1 301 -11 2367 83 7 0 chr10 25617656 25617956 -119971332 + AluY SINE Alu 1 302 -9 1262 168 9 23 chr10 25618061 25618281 -119971007 + AluSg/x SINE Alu 89 305 -7 2245 100 0 7 chr10 25619169 25619469 -119969819 - AluSx SINE Alu -14 298 1 201 182 0 0 chr10 25619794 25619827 -119969461 + A-rich Low_complexity Low_complexity 1 33 0 687 112 0 0 chr10 25620082 25620189 -119969099 + (TC)n Simple_repeat Simple_repeat 2 108 0 1520 154 3 68 chr10 25620190 25620483 -119968805 - AluJo SINE Alu -38 274 1 216 353 60 17 chr10 25621004 25621120 -119968168 - L2 LINE L2 -32 3281 3161 2366 104 0 0 chr10 25621420 25621718 -119967570 - AluSx SINE Alu -14 298 1 252 231 0 0 chr10 25621800 25621852 -119967436 + LTR30 LTR ERV1 1 52 -670 1001 191 40 56 chr10 25621852 25622156 -119967132 + LTR12 LTR ERV1 53 2032 -406 364 149 15 0 chr10 25622156 25622223 -119967065 + LTR30 LTR ERV1 551 618 -104 590 129 58 79 chr10 25622223 25622362 -119966926 + LTR12 LTR ERV1 352 487 -227 717 171 0 16 chr10 25622837 25622960 -119966328 - FLAM_C SINE Alu -21 122 2 7490 21 0 0 chr10 25623714 25624560 -119964728 + L1PA2 LINE L1 5297 6142 -13 1651 183 3 7 chr10 25624590 25624885 -119964403 + AluJo SINE Alu 1 294 -18 1196 201 3 81 chr10 25625415 25625524 -119963764 + AluJo SINE Alu 29 145 -167 2147 111 3 3 chr10 25625524 25625813 -119963475 + AluSx SINE Alu 1 289 -23 1196 201 3 81 chr10 25625813 25626011 -119963277 + AluJo SINE Alu 145 312 0 372 290 97 39 chr10 25626080 25626287 -119963001 + Charlie8 DNA MER1_type 103 321 -2096 249 301 68 110 chr10 25626344 25626563 -119962725 + MIR SINE MIR 34 243 -19 1560 191 7 7 chr10 25626881 25627169 -119962119 + AluJo SINE Alu 6 293 -19 183 80 0 0 chr10 25627234 25627259 -119962029 + (TTCA)n Simple_repeat Simple_repeat 2 26 0 230 358 0 18 chr10 25627283 25627392 -119961896 - L2 LINE L2 -43 3229 3123 832 107 0 107 chr10 25627440 25627589 -119961699 + FLAM_C SINE Alu 1 133 0 444 147 0 0 chr10 25628225 25628300 -119960988 + (TG)n Simple_repeat Simple_repeat 2 76 0 555 129 73 8 chr10 25628460 25628584 -119960704 + L1MC3 LINE L1 5267 5398 -2387 * 5392 188 59 75 chr10 25628574 25630510 -119958778 + L1PA16 LINE L1 4212 6177 11 2135 137 0 10 chr10 25630510 25630823 -119958465 + AluSg SINE Alu 1 310 0 5392 188 59 75 chr10 25630823 25631024 -119958264 + L1PA16 LINE L1 6177 6380 214 1909 162 7 7 chr10 25631024 25631332 -119957956 - AluSx SINE Alu -4 308 1 5392 188 59 75 chr10 25631332 25631585 -119957703 + L1PA16 LINE L1 6380 6636 470 2397 99 3 0 chr10 25631585 25631897 -119957391 + AluSp SINE Alu 1 313 0 5392 188 59 75 chr10 25631897 25632511 -119956777 + L1PA16 LINE L1 6636 7258 1092 760 167 17 0 chr10 25632511 25632631 -119956657 - FLAM_C SINE Alu -20 123 2 5392 188 59 75 chr10 25632631 25632645 -119956643 + L1PA16 LINE L1 7258 5936 -230 2299 88 10 0 chr10 25632645 25632939 -119956349 - AluY SINE Alu -14 297 1 5392 188 59 75 chr10 25632939 25633167 -119956121 + L1PA16 LINE L1 5935 6165 -1 1044 194 4 66 chr10 25633176 25633418 -119955870 + L1MC3 LINE L1 6201 6427 -1358 1000 169 39 10 chr10 25633431 25633638 -119955650 + L1MC3 LINE L1 7570 7782 -3 2423 82 3 0 chr10 25633884 25634188 -119955100 - AluY SINE Alu -6 305 1 2165 122 0 3 chr10 25634533 25634829 -119954459 + AluSq SINE Alu 1 295 -18 1958 118 0 83 chr10 25636319 25636657 -119952631 - AluSx SINE Alu -2 310 1 2378 69 16 0 chr10 25637198 25637504 -119951784 + AluY SINE Alu 1 311 0 321 330 0 0 chr10 25639277 25639380 -119949908 + MER5A DNA MER1_type 4 106 -83 1730 159 13 26 chr10 25639386 25639694 -119949594 - AluJo SINE Alu -8 304 1 1864 132 34 20 chr10 25640863 25641158 -119948130 - AluSq SINE Alu -14 299 1 1940 148 0 7 chr10 25641785 25642076 -119947212 + AluJb SINE Alu 6 294 -18 192 337 27 60 chr10 25642571 25642755 -119946533 + MIR3 SINE MIR 16 193 -15 4048 196 42 50 chr10 25643426 25643979 -119945309 - L1MD2 LINE L1 -197 6145 5589 2311 114 0 0 chr10 25643979 25644286 -119945002 - AluSg SINE Alu -3 307 1 4048 196 42 50 chr10 25644286 25644317 -119944971 - L1MD2 LINE L1 -753 5589 5559 1725 162 7 16 chr10 25644317 25644620 -119944668 + AluJb SINE Alu 5 304 -8 4048 196 42 50 chr10 25644620 25645034 -119944254 - L1MD2 LINE L1 -783 5559 5153 2205 116 0 0 chr10 25645034 25645326 -119943962 + AluSq SINE Alu 1 292 -21 4048 196 42 50 chr10 25645326 25645621 -119943667 - L1MD2 LINE L1 -1189 5153 4857 706 99 40 0 chr10 25645621 25645722 -119943566 - AluSq/x SINE Alu -205 107 3 534 161 21 0 chr10 25645736 25645829 -119943459 + L1M4 LINE L1 5189 5283 -863 3561 230 67 29 chr10 25645832 25646034 -119943254 - L1MD2 LINE L1 -1280 4849 4656 2516 70 0 10 chr10 25646034 25646348 -119942940 - AluY SINE Alu 0 311 1 3561 230 67 29 chr10 25646348 25647243 -119942045 - L1MD2 LINE L1 -1473 4656 3711 479 281 87 32 chr10 25647237 25647368 -119941920 - L1MD2 LINE L1 -853 1637 1515 * 180 0 0 0 chr10 25647368 25647388 -119941900 + (TA)n Simple_repeat Simple_repeat 2 21 0 479 281 87 32 chr10 25647388 25647573 -119941715 - L1MD2 LINE L1 -975 1515 1342 348 24 0 0 chr10 25647573 25647614 -119941674 + (TG)n Simple_repeat Simple_repeat 2 42 0 479 281 87 32 chr10 25647614 25647874 -119941414 - L1MD2 LINE L1 -1148 1342 984 811 227 91 12 chr10 25648045 25648287 -119941001 + MLT1I LTR MaLR 149 409 0 26 30 0 0 chr10 25648695 25648728 -119940560 + AT_rich Low_complexity Low_complexity 1 33 0 200 302 0 0 chr10 25649374 25649437 -119939851 - MIR SINE MIR -13 249 187 2528 152 25 23 chr10 25649452 25649501 -119939787 + Tigger2a DNA MER2_type 1 48 -2660 3375 202 79 4 chr10 25649501 25650184 -119939104 + MER50 LTR ERV1 1 734 0 2528 152 25 23 chr10 25650184 25650567 -119938721 + Tigger2a DNA MER2_type 48 434 0 190 216 307 0 chr10 25650568 25650656 -119938632 - MIR SINE MIR -90 172 58 224 309 0 15 chr10 25651013 25651081 -119938207 + MIR SINE MIR 4 70 -192 186 300 20 0 chr10 25651092 25651142 -119938146 + MIR SINE MIR 211 261 -1 2021 104 82 4 chr10 25651185 25651464 -119937824 + AluSg SINE Alu 1 301 -9 1097 246 104 26 chr10 25651536 25652176 -119937112 + L2 LINE L2 2527 3231 -82 2083 103 0 0 chr10 25652326 25652599 -119936689 - AluSx SINE Alu -39 273 1 1306 178 38 48 chr10 25652680 25652972 -119936316 + AluJo SINE Alu 1 289 -23 725 181 116 0 chr10 25653605 25653760 -119935528 + MER5A DNA MER1_type 17 189 0 1787 179 81 27 chr10 25654753 25655122 -119934166 - MLT1B LTR MaLR -1 389 1 21 0 0 0 chr10 25655698 25655719 -119933569 + AT_rich Low_complexity Low_complexity 1 21 0 2293 125 3 0 chr10 25657009 25657320 -119931968 + AluSq SINE Alu 1 312 -1 217 274 0 0 chr10 25658053 25658104 -119931184 + CT-rich Low_complexity Low_complexity 2 52 0 594 75 0 0 chr10 25658122 25658202 -119931086 + (TTCC)n Simple_repeat Simple_repeat 1 80 0 198 71 0 0 chr10 25658814 25658842 -119930446 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 1344 64 0 6 chr10 25659091 25659264 -119930024 - L1PA5 LINE L1 -1 6153 5982 13930 52 6 2 chr10 25659364 25661711 -119927577 - L1PA5 LINE L1 -143 6011 3658 1703 167 7 24 chr10 25661906 25662221 -119927067 + AluJo SINE Alu 1 310 0 205 287 30 20 chr10 25662479 25662580 -119926708 - L3b LINE CR1 -175 1408 1307 204 371 0 0 chr10 25663017 25663087 -119926201 + L3b LINE CR1 1296 1365 -218 525 248 8 0 chr10 25663833 25663950 -119925338 - MER96B DNA MER1_type? -2 415 298 2015 82 4 11 chr10 25663953 25664222 -119925066 + AluY SINE Alu 5 271 -40 313 139 7 7 chr10 25664375 25664463 -119924825 - L1ME LINE L1 -366 5785 5695 204 289 122 0 chr10 25664465 25664555 -119924733 - MIR SINE MIR -92 116 16 201 133 0 0 chr10 25665675 25665705 -119923583 + (TG)n Simple_repeat Simple_repeat 2 31 0 2304 289 137 25 chr10 25666404 25667275 -119922013 + L2 LINE L2 1715 2487 -826 2086 102 51 0 chr10 25667275 25667550 -119921738 - AluSx SINE Alu -23 289 1 2304 289 137 25 chr10 25667550 25668111 -119921177 + L2 LINE L2 2487 3312 -1 2281 122 0 0 chr10 25669189 25669493 -119919795 - AluSq SINE Alu -9 304 1 1214 276 18 38 chr10 25670571 25670966 -119918322 - MER115 DNA AcHobo -25 668 282 1481 164 19 58 chr10 25672026 25672338 -119916950 - AluJo SINE Alu -12 300 1 2189 102 26 10 chr10 25672974 25673278 -119916010 + AluSx SINE Alu 2 310 -2 588 220 75 31 chr10 25673556 25673715 -119915573 + MIR SINE MIR 92 257 -5 471 296 11 21 chr10 25673881 25674070 -119915218 - L1ME3A LINE L1 -206 5964 5778 666 290 101 38 chr10 25674207 25675045 -119914243 - L1ME3A LINE L1 -597 5573 4685 243 0 0 0 chr10 25675067 25675094 -119914194 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1925 157 0 3 chr10 25675096 25675383 -119913905 - AluSx SINE Alu -26 286 1 492 328 153 16 chr10 25675450 25675966 -119913322 - L1ME3A LINE L1 -1830 4316 3730 2908 90 6 11 chr10 25675997 25676363 -119912925 - THE1B LTR MaLR 0 364 1 296 68 0 0 chr10 25676981 25677025 -119912263 - AluY SINE Alu 0 302 259 1786 109 0 49 chr10 25677125 25677392 -119911896 - AluY SINE Alu -57 254 1 1864 157 28 0 chr10 25677465 25677627 -119911661 - AluSx SINE Alu -17 295 120 1954 100 0 4 chr10 25677627 25677887 -119911401 - AluSc SINE Alu -4 305 47 1864 157 28 0 chr10 25677887 25678011 -119911277 - AluSx SINE Alu -192 120 1 21 0 0 0 chr10 25678243 25678264 -119911024 + AT_rich Low_complexity Low_complexity 1 21 0 257 290 75 47 chr10 25678591 25678698 -119910590 + L2 LINE L2 3162 3271 -1 2385 88 3 0 chr10 25678771 25679076 -119910212 - AluSc SINE Alu -3 306 1 570 190 17 31 chr10 25679482 25679645 -119909643 + MER69 DNA AcHobo 9 2526 0 471 333 125 27 chr10 25679689 25680137 -119909151 - L1ME4a LINE L1 -223 5898 5407 2020 129 3 10 chr10 25680516 25680810 -119908478 + AluSx SINE Alu 1 292 -20 941 242 62 0 chr10 25681234 25681461 -119907827 + MIR SINE MIR 14 254 -8 989 283 114 37 chr10 25681525 25682235 -119907053 + L2 LINE L2 2522 3313 0 1232 216 42 19 chr10 25682488 25682798 -119906490 + L1ME1 LINE L1 5818 6134 -32 2476 113 21 16 chr10 25682804 25683183 -119906105 - L1PB1 LINE L1 -1 6150 5770 1742 147 3 11 chr10 25683220 25683505 -119905783 - AluSx SINE Alu -29 283 1 2183 117 0 3 chr10 25684314 25684612 -119904676 + AluSx SINE Alu 1 297 -15 442 139 236 0 chr10 25684969 25685041 -119904247 + AluS SINE Alu 2 90 -222 544 218 20 0 chr10 25685042 25685143 -119904145 - AluJo SINE Alu -125 187 85 1251 223 108 47 chr10 25685303 25685644 -119903644 + MER82 DNA MER2_type 1 362 -291 1174 134 5 37 chr10 25685707 25685894 -119903394 - AluJo SINE Alu -36 276 96 614 131 50 30 chr10 25685928 25686027 -119903261 - AluJo SINE Alu -211 101 1 1134 271 11 4 chr10 25686091 25686364 -119902924 + MER82 DNA MER2_type 379 653 0 500 136 0 12 chr10 25686441 25686522 -119902766 - MADE1 DNA Mariner 0 80 1 1418 181 3 59 chr10 25687202 25687354 -119901934 - AluJo SINE Alu -25 287 159 2249 124 0 0 chr10 25687354 25687653 -119901635 - AluSg SINE Alu -11 299 1 1418 181 3 59 chr10 25687653 25687804 -119901484 - AluJo SINE Alu -153 159 1 2865 93 8 16 chr10 25688204 25688582 -119900706 + THE1C LTR MaLR 1 375 0 349 303 30 8 chr10 25688969 25689101 -119900187 + L3 LINE CR1 1248 1382 -195 288 328 146 5 chr10 25689089 25689281 -119900007 + MIR SINE MIR 23 241 -21 * 209 307 45 34 chr10 25689313 25689401 -119899887 - L2 LINE L2 0 3313 3225 1986 119 59 0 chr10 25689600 25689886 -119899402 - AluSx SINE Alu -9 303 1 200 226 12 36 chr10 25689952 25690036 -119899252 + T-rich Low_complexity Low_complexity 2 83 0 305 263 0 0 chr10 25690888 25690968 -119898320 - MER116 DNA Mariner 0 80 1 2401 85 3 0 chr10 25691276 25691581 -119897707 + AluY SINE Alu 1 306 -5 1021 169 39 10 chr10 25691827 25692034 -119897254 - L1MC3 LINE L1 -3 7782 7570 1055 194 4 66 chr10 25692047 25692289 -119896999 - L1MC3 LINE L1 -1358 6427 6201 5444 188 58 76 chr10 25692298 25692526 -119896762 - L1PA16 LINE L1 -1 6165 5935 2304 85 10 0 chr10 25692526 25692820 -119896468 + AluY SINE Alu 1 297 -14 5444 188 58 76 chr10 25692820 25692834 -119896454 - L1PA16 LINE L1 -231 5935 5922 808 167 17 0 chr10 25692834 25692954 -119896334 + FLAM_C SINE Alu 2 123 -20 5444 188 58 76 chr10 25692954 25693569 -119895719 - L1PA16 LINE L1 -244 5922 5298 2417 96 3 0 chr10 25693569 25693881 -119895407 - AluSp SINE Alu 0 313 1 5444 188 58 76 chr10 25693881 25694134 -119895154 - L1PA16 LINE L1 -868 5298 5042 1906 162 7 7 chr10 25694134 25694442 -119894846 + AluSx SINE Alu 1 308 -4 5444 188 58 76 chr10 25694442 25694643 -119894645 - L1PA16 LINE L1 -1124 5042 4839 2165 131 0 10 chr10 25694643 25694956 -119894332 - AluSg SINE Alu 0 310 1 5444 188 58 76 chr10 25694956 25696898 -119892390 - L1PA16 LINE L1 -1327 4839 4212 567 129 73 8 chr10 25696888 25697012 -119892276 - L1MC3 LINE L1 -2387 5398 5267 * 423 160 0 0 chr10 25697172 25697247 -119892041 + (CA)n Simple_repeat Simple_repeat 2 76 0 2171 92 3 7 chr10 25697791 25698099 -119891189 - AluSx SINE Alu 0 307 1 230 339 80 37 chr10 25699417 25699661 -119889627 - L2 LINE L2 -253 3019 2701 31 44 0 0 chr10 25699845 25699890 -119889398 + AT_rich Low_complexity Low_complexity 1 45 0 194 307 119 11 chr10 25699899 25700075 -119889213 - L2 LINE L2 -1365 1949 1755 180 152 0 0 chr10 25700174 25700207 -119889081 + GA-rich Low_complexity Low_complexity 3 35 0 189 0 0 0 chr10 25700270 25700291 -119888997 + (GGA)n Simple_repeat Simple_repeat 1 21 0 2251 95 7 0 chr10 25701356 25701650 -119887638 - AluSx SINE Alu -16 296 1 2145 122 0 3 chr10 25701995 25702291 -119886997 + AluSq SINE Alu 1 295 -18 1962 115 0 83 chr10 25703781 25704119 -119885169 - AluSx SINE Alu -2 310 1 2439 49 16 0 chr10 25704659 25704963 -119884325 + AluY SINE Alu 1 309 -2 432 296 82 13 chr10 25706740 25706849 -119882439 + MER5A DNA MER1_type 4 129 -60 1715 159 13 26 chr10 25706849 25707157 -119882131 - AluJo SINE Alu -8 304 1 432 296 82 13 chr10 25707157 25707206 -119882082 + MER5A DNA MER1_type 129 173 -16 294 203 16 16 chr10 25707902 25707966 -119881322 + MER20B DNA MER1_type 24 87 -696 2139 121 0 34 chr10 25708218 25708540 -119880748 + AluSx SINE Alu 1 311 -1 860 226 196 1 chr10 25708656 25709172 -119880116 + MER20B DNA MER1_type 109 783 0 2179 141 0 0 chr10 25709265 25709577 -119879711 + AluSx SINE Alu 1 312 0 1625 169 50 7 chr10 25710161 25710440 -119878848 - AluJo SINE Alu -12 300 10 1720 133 4 4 chr10 25711317 25711565 -119877723 - AluSx SINE Alu -12 300 53 2113 121 0 3 chr10 25711565 25711862 -119877426 - AluSx SINE Alu -16 296 1 2276 102 0 0 chr10 25712512 25712807 -119876481 + AluSx SINE Alu 1 295 -17 2294 137 63 18 chr10 25712807 25713187 -119876101 - LTR32 LTR ERVL -63 408 12 793 261 176 60 chr10 25713271 25713767 -119875521 - L2 LINE L2 -2 3311 2874 1957 151 0 7 chr10 25713767 25714065 -119875223 - AluJo SINE Alu -16 296 1 793 261 176 60 chr10 25714065 25714462 -119874826 - L2 LINE L2 -439 2874 2311 34 42 0 0 chr10 25715078 25715126 -119874162 + AT_rich Low_complexity Low_complexity 1 48 0 1315 202 109 8 chr10 25715126 25715383 -119873905 - AluJo SINE Alu -19 283 1 297 311 203 12 chr10 25715500 25715825 -119873463 - L2 LINE L2 -338 2976 2590 1444 215 63 6 chr10 25715947 25716416 -119872872 - MER87 LTR ERV1 0 541 21 282 304 146 23 chr10 25716448 25716708 -119872580 - L2 LINE L2 -882 2432 2141 1810 171 3 31 chr10 25718243 25718564 -119870724 + AluJb SINE Alu 1 312 0 2087 131 7 0 chr10 25719590 25719887 -119869401 + AluSx SINE Alu 1 299 -13 348 127 0 0 chr10 25719887 25719942 -119869346 + (GGGA)n Simple_repeat Simple_repeat 1 55 0 282 116 0 0 chr10 25720086 25720129 -119869159 + (CA)n Simple_repeat Simple_repeat 1 43 0 434 261 29 14 chr10 25720147 25720285 -119869003 - MER103 DNA DNA -25 141 2 383 262 104 12 chr10 25720364 25720528 -119868760 + MIR SINE MIR 27 205 -57 636 257 57 11 chr10 25720967 25721142 -119868146 - MIR SINE MIR -7 255 73 1874 152 0 3 chr10 25721464 25721770 -119867518 + AluJb SINE Alu 1 305 0 22 0 0 0 chr10 25723055 25723077 -119866211 + AT_rich Low_complexity Low_complexity 1 22 0 2196 109 3 10 chr10 25723083 25723385 -119865903 + AluSx SINE Alu 1 300 -12 1702 176 7 3 chr10 25723388 25723677 -119865611 + AluJb SINE Alu 5 294 -18 1726 92 26 0 chr10 25724593 25724820 -119864468 - AluSg/x SINE Alu -10 300 68 2303 78 7 10 chr10 25725409 25725715 -119863573 + AluY SINE Alu 1 305 -6 921 176 0 34 chr10 25726349 25726525 -119862763 + AluJb SINE Alu 137 306 -6 491 222 20 0 chr10 25727068 25727167 -119862121 + MER81 DNA DNA 13 113 -1 778 204 0 0 chr10 25728031 25728163 -119861125 - FLAM_A SINE Alu -1 132 1 817 149 25 19 chr10 25728482 25728643 -119860645 - MER119 DNA MER1_type -54 529 368 626 195 0 16 chr10 25728644 25728772 -119860516 + MLT2D LTR ERVL 2 127 -287 821 145 8 0 chr10 25728772 25728889 -119860399 + FLAM_C SINE Alu 3 120 -13 731 126 20 13 chr10 25728893 25729044 -119860244 + (TAGA)n Simple_repeat Simple_repeat 1 152 0 1355 163 8 54 chr10 25729045 25729303 -119859985 + MLT2D LTR ERVL 121 366 -48 1655 195 62 21 chr10 25729382 25729720 -119859568 - MER119 DNA MER1_type -231 352 1 2427 91 7 0 chr10 25729841 25730149 -119859139 + AluSx SINE Alu 1 310 -2 2468 72 0 13 chr10 25731505 25731809 -119857479 + AluY SINE Alu 1 300 -11 2079 152 61 13 chr10 25731819 25731995 -119857293 + L1MB3 LINE L1 5552 5718 -465 1917 135 20 24 chr10 25731995 25732291 -119856997 + AluSx SINE Alu 1 295 -17 2079 152 61 13 chr10 25732291 25732679 -119856609 + L1MB3 LINE L1 5718 6169 -14 1946 135 0 17 chr10 25732683 25732997 -119856291 - AluSx SINE Alu 0 309 1 189 250 12 95 chr10 25733008 25733092 -119856196 - MER5B DNA MER1_type -45 133 57 262 77 0 0 chr10 25733338 25733377 -119855911 + L1MA3 LINE L1 6267 6305 0 1173 194 17 69 chr10 25733672 25733960 -119855328 - AluJo SINE Alu 0 312 40 360 0 0 0 chr10 25734532 25734572 -119854716 + (TG)n Simple_repeat Simple_repeat 2 41 0 1753 148 11 15 chr10 25734742 25735013 -119854275 + AluJo SINE Alu 19 288 -24 2057 131 0 0 chr10 25735024 25735334 -119853954 + AluSx SINE Alu 1 310 0 562 250 83 31 chr10 25738173 25738228 -119851060 - MIR SINE MIR -45 217 166 1913 126 47 0 chr10 25738228 25738506 -119850782 - AluJo SINE Alu -10 302 12 562 250 83 31 chr10 25738506 25738642 -119850646 - MIR SINE MIR -96 166 16 3212 131 10 12 chr10 25738809 25739298 -119849990 - LOR1a LTR ERV1 -7 490 3 296 158 0 73 chr10 25739721 25740032 -119849256 + (TA)n Simple_repeat Simple_repeat 1 288 0 304 311 49 37 chr10 25740340 25740504 -119848784 + MIR SINE MIR 97 262 0 2389 99 0 0 chr10 25740757 25741060 -119848228 + AluSq SINE Alu 1 303 -10 1829 168 7 0 chr10 25741361 25741653 -119847635 - AluJb SINE Alu -18 294 1 1918 163 3 0 chr10 25741681 25741982 -119847306 - AluJo SINE Alu -10 302 1 2194 105 0 3 chr10 25742539 25742834 -119846454 - AluSq SINE Alu -13 300 7 195 292 100 50 chr10 25743241 25743361 -119845927 + L3 LINE CR1 317 442 -1135 2067 117 0 11 chr10 25743773 25744056 -119845232 - AluSx SINE Alu -24 288 9 684 139 28 0 chr10 25744172 25744280 -119845008 - L1PA16 LINE L1 -9 6157 6047 341 297 132 62 chr10 25744490 25744830 -119844458 + L3b LINE CR1 1102 1465 -118 772 199 8 8 chr10 25744998 25745129 -119844159 + FLAM_A SINE Alu 1 131 -2 602 85 11 0 chr10 25745132 25745226 -119844062 + (GGAA)n Simple_repeat Simple_repeat 2 96 0 243 253 162 40 chr10 25745401 25745500 -119843788 + L2 LINE L2 3160 3270 -2 1551 194 95 14 chr10 25745686 25746032 -119843256 + L1MB8 LINE L1 5657 6030 -148 1229 108 0 6 chr10 25746034 25746200 -119843088 - AluSg/x SINE Alu -15 297 133 432 245 38 0 chr10 25746200 25746324 -119842964 + L1MB7 LINE L1 6021 6149 -25 1620 167 14 21 chr10 25746324 25746657 -119842631 - AluJo SINE Alu 0 333 3 2065 102 3 7 chr10 25746706 25746990 -119842298 + AluSq SINE Alu 1 283 -30 2337 202 26 22 chr10 25747515 25748123 -119841165 + L1M3 LINE L1 4848 5457 -723 252 214 0 0 chr10 25748122 25748164 -119841124 - L1M4 LINE L1 -711 5467 5426 * 2261 110 3 3 chr10 25748345 25748655 -119840633 - AluSg SINE Alu 0 310 1 241 302 54 31 chr10 25749723 25749852 -119839436 + MIR SINE MIR 119 250 -12 348 348 81 5 chr10 25750270 25750491 -119838797 - MIR SINE MIR -14 248 11 2246 125 44 36 chr10 25750910 25751271 -119838017 + THE1B LTR MaLR 1 364 0 420 321 79 42 chr10 25752388 25752578 -119836710 + MIR3 SINE MIR 5 201 -7 25 51 0 0 chr10 25753046 25753085 -119836203 + AT_rich Low_complexity Low_complexity 1 39 0 317 336 64 39 chr10 25753151 25753365 -119835923 - L1MC4a LINE L1 -1766 6042 5818 2360 89 7 0 chr10 25753365 25753668 -119835620 - AluSx SINE Alu -7 305 1 317 336 64 39 chr10 25753668 25753736 -119835552 - L1MC4a LINE L1 -1990 5818 5753 269 266 149 39 chr10 25753814 25754183 -119835105 - L1MC4a LINE L1 -725 5441 5296 282 323 52 47 chr10 25754280 25754704 -119834584 - L1MC4a LINE L1 -979 5167 4742 22 70 0 0 chr10 25754885 25754928 -119834360 + AT_rich Low_complexity Low_complexity 1 43 0 2539 114 22 75 chr10 25756509 25756893 -119832395 - L1MB2 LINE L1 0 6171 5813 2229 64 0 30 chr10 25756893 25757189 -119832099 + AluY SINE Alu 1 287 -24 2539 114 22 75 chr10 25757189 25757259 -119832029 - L1MB2 LINE L1 -358 5813 5741 2106 123 7 3 chr10 25757280 25757582 -119831706 - AluSx SINE Alu -9 303 1 21 0 0 0 chr10 25758293 25758314 -119830974 + AT_rich Low_complexity Low_complexity 1 21 0 898 143 7 0 chr10 25758488 25758635 -119830653 - L1MA9 LINE L1 -5 6307 6160 1872 122 68 0 chr10 25758786 25759064 -119830224 + AluSx SINE Alu 1 297 -15 1404 174 80 31 chr10 25759576 25759863 -119829425 + AluJb SINE Alu 1 301 -11 245 239 204 44 chr10 25760115 25760228 -119829060 - MIR SINE MIR -13 249 119 2058 132 3 7 chr10 25761656 25761959 -119827329 - AluSx SINE Alu -10 302 1 195 42 0 0 chr10 25764131 25764155 -119825133 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 3873 154 141 12 chr10 25764949 25765681 -119823607 - LTR1B LTR ERV1 0 826 1 1581 203 56 17 chr10 25765999 25766359 -119822929 - MLT1A2 LTR MaLR 0 374 1 2439 91 0 0 chr10 25766448 25766756 -119822532 - AluSg SINE Alu 0 310 3 208 250 0 0 chr10 25766929 25766981 -119822307 - MIR SINE MIR -93 169 118 1926 156 71 24 chr10 25767220 25767598 -119821690 + MSTD LTR MaLR 1 396 0 314 226 137 24 chr10 25767647 25767771 -119821517 - MIR3 SINE MIR -49 159 22 247 210 14 168 chr10 25769488 25769631 -119819657 + MARNA DNA Mariner 440 560 -26 204 125 0 0 chr10 25769753 25769785 -119819503 + (TTTTC)n Simple_repeat Simple_repeat 3 34 0 2118 143 0 9 chr10 25769787 25770102 -119819186 - AluSx SINE Alu 0 312 1 343 335 71 27 chr10 25770155 25770379 -119818909 - MIR SINE MIR -26 236 3 2168 100 0 4 chr10 25770750 25771030 -119818258 - AluSx SINE Alu -6 306 28 281 253 103 34 chr10 25771693 25771839 -119817449 - L1ME4a LINE L1 -11 6110 5955 1863 167 0 16 chr10 25771879 25772196 -119817092 - AluJb SINE Alu 0 312 1 2413 66 0 25 chr10 25772402 25772721 -119816567 + AluY SINE Alu 1 311 0 272 329 60 7 chr10 25772828 25772977 -119816311 - MIR SINE MIR -8 254 98 574 110 8 31 chr10 25773422 25773668 -119815620 + AluSx SINE Alu 1 310 0 1817 178 0 22 chr10 25774261 25774575 -119814713 - AluJo SINE Alu -5 307 1 2415 90 0 0 chr10 25774684 25774983 -119814305 - AluSq SINE Alu -14 299 1 215 222 0 19 chr10 25775444 25775479 -119813809 + CT-rich Low_complexity Low_complexity 3 38 -17 1521 169 0 55 chr10 25775479 25775805 -119813483 - AluJo SINE Alu 0 312 5 215 222 0 19 chr10 25775805 25775823 -119813465 + CT-rich Low_complexity Low_complexity 38 55 0 183 42 0 0 chr10 25776400 25776424 -119812864 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 2158 136 0 0 chr10 25776866 25777176 -119812112 + AluSx SINE Alu 1 310 -2 204 237 0 51 chr10 25777754 25777813 -119811475 + T-rich Low_complexity Low_complexity 4 59 0 942 145 62 0 chr10 25778422 25778601 -119810687 - MIR SINE MIR -3 259 70 351 0 0 0 chr10 25779883 25779922 -119809366 + (TG)n Simple_repeat Simple_repeat 2 40 0 2619 53 0 0 chr10 25780687 25780989 -119808299 + AluY SINE Alu 1 302 -9 878 172 53 24 chr10 25781301 25781470 -119807818 - AluJb SINE Alu -138 174 1 1690 116 31 41 chr10 25782518 25782696 -119806592 + L1PA16 LINE L1 5867 6042 -124 2120 174 73 16 chr10 25782696 25783132 -119806156 - LOR1b LTR ERV1 0 461 1 1690 116 31 41 chr10 25783132 25783247 -119806041 + L1PA16 LINE L1 6042 6157 -9 1715 173 7 7 chr10 25785371 25785678 -119803610 - AluJo SINE Alu -5 307 1 276 318 117 7 chr10 25786904 25787058 -119802230 - MIR3 SINE MIR -6 202 32 1817 149 22 4 chr10 25787073 25787348 -119801940 + AluJo SINE Alu 1 280 -32 210 37 0 0 chr10 25787348 25787375 -119801913 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 2084 146 0 3 chr10 25790361 25790669 -119798619 + AluSq SINE Alu 1 307 -6 1528 148 0 59 chr10 25790936 25791207 -119798081 + AluSx SINE Alu 1 255 -57 360 0 0 0 chr10 25791207 25791247 -119798041 + (TAAA)n Simple_repeat Simple_repeat 3 42 0 2054 156 24 15 chr10 25791947 25792281 -119797007 + MER1B DNA MER1_type 1 337 0 22 70 0 0 chr10 25793042 25793085 -119796203 + AT_rich Low_complexity Low_complexity 1 43 0 1225 156 14 14 chr10 25793428 25793639 -119795649 - AluJb SINE Alu 0 312 102 1316 188 7 33 chr10 25843644 25843916 -119745372 - AluJo SINE Alu -36 276 12 898 169 0 0 chr10 25844475 25844611 -119744677 + MER2 DNA MER2_type 1 136 -209 532 227 74 51 chr10 25844652 25844868 -119744420 + MER2 DNA MER2_type 125 345 0 2141 111 3 0 chr10 25845097 25845386 -119743902 - AluSx SINE Alu -13 299 10 1705 167 10 7 chr10 25845918 25846211 -119743077 + AluJo SINE Alu 6 299 -13 1553 169 52 14 chr10 25846211 25846331 -119742957 + AluJb SINE Alu 1 115 -197 186 43 0 0 chr10 25846331 25846354 -119742934 + (GAAAA)n Simple_repeat Simple_repeat 2 24 0 1553 169 52 14 chr10 25846354 25846523 -119742765 + AluJb SINE Alu 115 301 -11 454 223 127 6 chr10 25846799 25846956 -119742332 - MIR SINE MIR 0 262 87 2563 108 11 6 chr10 25847765 25848127 -119741161 - THE1B LTR MaLR 0 364 1 22 0 0 0 chr10 25848152 25848174 -119741114 + AT_rich Low_complexity Low_complexity 1 22 0 2421 101 0 3 chr10 25849900 25850206 -119739082 + AluSq SINE Alu 1 305 -8 2012 125 0 7 chr10 25850797 25851110 -119738178 + AluSx SINE Alu 3 313 0 300 216 152 117 chr10 25851110 25851281 -119738007 - MER5B DNA MER1_type -1 177 1 2444 85 0 3 chr10 25852596 25852902 -119736386 + AluSq SINE Alu 1 305 -8 379 160 4 4 chr10 25853325 25853400 -119735888 - Alu SINE Alu -246 53 1 643 296 149 13 chr10 25853420 25853941 -119735347 + L2 LINE L2 2716 3312 -1 2294 122 0 0 chr10 25855019 25855323 -119733965 - AluSq SINE Alu -9 304 1 1223 276 18 38 chr10 25856401 25856796 -119732492 - MER115 DNA AcHobo -25 668 282 1494 164 19 58 chr10 25857856 25858168 -119731120 - AluJo SINE Alu -12 300 1 2186 103 26 10 chr10 25858804 25859106 -119730182 + AluSx SINE Alu 2 308 -4 574 208 75 31 chr10 25859380 25859539 -119729749 + MIR SINE MIR 92 257 -5 448 291 16 26 chr10 25859706 25859895 -119729393 - L1ME3A LINE L1 -206 5964 5778 664 288 101 38 chr10 25860032 25860870 -119728418 - L1ME3A LINE L1 -597 5573 4685 243 0 0 0 chr10 25860892 25860919 -119728369 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1951 157 0 3 chr10 25860921 25861208 -119728080 - AluSx SINE Alu -26 286 1 439 328 153 16 chr10 25861275 25861791 -119727497 - L1ME3A LINE L1 -1830 4316 3730 2795 90 6 8 chr10 25861822 25862187 -119727101 - THE1B LTR MaLR 0 364 1 2217 102 0 41 chr10 25862804 25863119 -119726169 - AluY SINE Alu -9 302 1 1880 157 28 0 chr10 25863192 25863354 -119725934 - AluSx SINE Alu -17 295 120 1965 100 0 4 chr10 25863354 25863614 -119725674 - AluSc SINE Alu -4 305 47 1880 157 28 0 chr10 25863614 25863738 -119725550 - AluSx SINE Alu -192 120 1 21 0 0 0 chr10 25863970 25863991 -119725297 + AT_rich Low_complexity Low_complexity 1 21 0 221 290 75 47 chr10 25864318 25864425 -119724863 + L2 LINE L2 3162 3271 -1 2405 88 3 0 chr10 25864498 25864803 -119724485 - AluSc SINE Alu -3 306 1 570 190 17 31 chr10 25865209 25865372 -119723916 + MER69 DNA AcHobo 9 2526 0 471 333 125 27 chr10 25865416 25865864 -119723424 - L1ME4a LINE L1 -223 5898 5407 2020 129 3 10 chr10 25866243 25866537 -119722751 + AluSx SINE Alu 1 292 -20 413 297 95 23 chr10 25867338 25867554 -119721734 + MIR SINE MIR 19 250 -12 415 211 0 11 chr10 25868534 25868624 -119720664 - L2 LINE L2 -1 3312 3224 839 117 102 22 chr10 25868640 25868777 -119720511 + FRAM SINE Alu 21 168 -8 259 324 33 56 chr10 25868777 25868990 -119720298 - L2 LINE L2 -94 3219 3012 1062 236 114 64 chr10 25868990 25869540 -119719748 - HAL1 LINE L1 -898 1609 1032 347 304 63 87 chr10 25869548 25869761 -119719527 - HAL1 LINE L1 -1575 932 728 1553 196 0 11 chr10 25869761 25870036 -119719252 + AluJb SINE Alu 1 272 -40 347 304 63 87 chr10 25870036 25870154 -119719134 - HAL1 LINE L1 -1779 728 609 3849 132 2 8 chr10 25870297 25870827 -119718461 - MER1A DNA MER1_type 0 527 1 334 264 100 36 chr10 25870986 25871126 -119718162 - HAL1 LINE L1 -2358 149 1 650 210 107 24 chr10 25871242 25871432 -119717856 - MLT1G1 LTR MaLR 0 595 332 254 183 0 33 chr10 25871608 25871668 -119717620 - MLT1G1 LTR MaLR -374 175 118 2347 100 20 0 chr10 25872019 25872318 -119716970 - AluSx SINE Alu -7 305 1 1762 186 3 0 chr10 25872365 25872655 -119716633 - AluJo SINE Alu -21 291 1 186 128 0 0 chr10 25873205 25873244 -119716044 + (T)n Simple_repeat Simple_repeat 1 39 0 368 306 52 52 chr10 25873440 25873613 -119715675 - MIR3 SINE MIR -16 192 20 240 35 0 0 chr10 25873898 25873927 -119715361 + (TC)n Simple_repeat Simple_repeat 2 30 0 2258 106 6 6 chr10 25873927 25874239 -119715049 - AluSx SINE Alu 0 312 1 1668 177 7 3 chr10 25874248 25874536 -119714752 - AluJo SINE Alu -23 289 1 266 326 11 11 chr10 25874699 25874794 -119714494 - MIR3 SINE MIR -50 158 64 2250 112 0 0 chr10 25875761 25876056 -119713232 - AluSx SINE Alu -17 295 1 2478 75 0 0 chr10 25876372 25876680 -119712608 + AluY SINE Alu 1 308 -3 255 61 0 0 chr10 25877802 25877835 -119711453 + (A)n Simple_repeat Simple_repeat 1 33 0 1724 215 66 35 chr10 25879375 25879863 -119709425 - MLT1D LTR MaLR -2 503 1 201 213 0 0 chr10 25882539 25882586 -119706702 + (TG)n Simple_repeat Simple_repeat 1 47 0 533 282 82 20 chr10 25882762 25882807 -119706481 - MIR SINE MIR -1 261 220 2044 132 31 0 chr10 25882807 25883095 -119706193 - AluSx SINE Alu -13 299 3 533 282 82 20 chr10 25883095 25883294 -119705994 - MIR SINE MIR -42 220 2 580 254 92 40 chr10 25883562 25883889 -119705399 + L1MC5 LINE L1 7581 7924 -37 2026 119 3 3 chr10 25883893 25884207 -119705081 - AluSx SINE Alu 0 314 1 201 444 41 0 chr10 25884237 25884406 -119704882 + L2 LINE L2 2999 3174 -98 408 276 122 13 chr10 25884982 25885138 -119704150 - MIR SINE MIR -38 224 52 8182 20 0 0 chr10 25885278 25886201 -119703087 - L1PA4 LINE L1 -3 6152 5230 222 37 0 0 chr10 25886294 25886321 -119702967 + (GAAAA)n Simple_repeat Simple_repeat 4 30 0 710 304 9 17 chr10 25886569 25886799 -119702489 - MIR SINE MIR -3 259 32 2047 50 35 15 chr10 25887102 25887397 -119701891 - L1PA5 LINE L1 0 6154 5890 2329 96 0 0 chr10 25887745 25888036 -119701252 + AluSc SINE Alu 1 291 -18 1752 173 6 6 chr10 25888270 25888582 -119700706 - AluJb SINE Alu 0 312 1 23 0 0 0 chr10 25890158 25890181 -119699107 + AT_rich Low_complexity Low_complexity 1 23 0 633 243 101 0 chr10 25890572 25890741 -119698547 - MIR SINE MIR -59 203 18 21 0 0 0 chr10 25890813 25890834 -119698454 + AT_rich Low_complexity Low_complexity 1 21 0 1683 97 10 59 chr10 25892241 25892287 -119697001 + L1MA2 LINE L1 6029 6076 -228 2418 58 7 29 chr10 25892287 25892595 -119696693 + AluY SINE Alu 1 301 -10 1683 97 10 59 chr10 25892595 25892838 -119696450 + L1MA2 LINE L1 6076 6304 0 310 317 30 64 chr10 25892871 25893073 -119696215 - MIR3 SINE MIR -6 202 8 26 0 0 0 chr10 25895208 25895234 -119694054 + AT_rich Low_complexity Low_complexity 1 26 0 1864 149 10 3 chr10 25895786 25896081 -119693207 - AluJb SINE Alu -15 297 1 2278 98 3 0 chr10 25896601 25896897 -119692391 - AluSx SINE Alu -15 297 1 22 0 0 0 chr10 25896907 25896929 -119692359 + AT_rich Low_complexity Low_complexity 1 22 0 288 169 0 133 chr10 25897223 25897240 -119692048 - AluJo SINE Alu 0 302 284 252 59 0 0 chr10 25897240 25897274 -119692014 + (TG)n Simple_repeat Simple_repeat 1 34 0 288 169 0 133 chr10 25897274 25897339 -119691949 - AluJo SINE Alu -18 284 231 1492 151 12 27 chr10 25897339 25897598 -119691690 - AluJo SINE Alu -57 255 1 433 262 48 0 chr10 25898496 25898622 -119690666 + MIR SINE MIR 80 211 -51 1031 173 16 26 chr10 25898827 25899018 -119690270 + MER5A DNA MER1_type 1 189 0 215 426 15 15 chr10 25899317 25899453 -119689835 + L2 LINE L2 3123 3258 -14 213 333 13 0 chr10 25899450 25899528 -119689760 - MIR3 SINE MIR -5 203 125 * 1607 202 0 34 chr10 25899536 25899858 -119689430 + AluJo SINE Alu 1 311 -1 235 0 0 54 chr10 25901224 25901261 -119688027 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 2016 131 0 3 chr10 25901269 25901552 -119687736 - AluSx SINE Alu -30 282 1 311 264 30 12 chr10 25901947 25902114 -119687174 + (TA)n Simple_repeat Simple_repeat 1 170 0 180 0 0 0 chr10 25903330 25903350 -119685938 + (TCTG)n Simple_repeat Simple_repeat 2 21 0 1723 160 4 7 chr10 25904390 25904671 -119684617 - AluJb SINE Alu -21 291 12 402 74 0 0 chr10 25907683 25907737 -119681551 + (TG)n Simple_repeat Simple_repeat 2 55 0 24 77 0 0 chr10 25908923 25908975 -119680313 + AT_rich Low_complexity Low_complexity 1 52 0 1769 148 7 11 chr10 25909004 25909317 -119679971 - AluSx SINE Alu 0 317 6 189 0 0 0 chr10 25909508 25909529 -119679759 + (ATTG)n Simple_repeat Simple_repeat 4 24 0 2184 101 0 0 chr10 25909529 25909807 -119679481 - AluSx SINE Alu -32 280 3 315 164 0 49 chr10 25911423 25911484 -119677804 - Tigger2a DNA MER2_type 0 434 377 2366 97 0 13 chr10 25911499 25911809 -119677479 + AluSx SINE Alu 1 306 -6 909 164 6 40 chr10 25911919 25912096 -119677192 - Tigger2a DNA MER2_type -263 171 1 1866 189 59 66 chr10 25912461 25912949 -119676339 - MLT1D LTR MaLR 0 505 21 2258 120 0 0 chr10 25914740 25915040 -119674248 + AluSq SINE Alu 1 300 -13 333 159 19 9 chr10 25916606 25916713 -119672575 + (CA)n Simple_repeat Simple_repeat 1 108 0 922 241 27 27 chr10 25917017 25917278 -119672010 - MIR SINE MIR 0 262 2 952 157 26 92 chr10 25919319 25919401 -119669887 - MER20 DNA MER1_type 0 219 133 2871 143 13 4 chr10 25919401 25919854 -119669434 - MSTB2 LTR MaLR 0 457 1 952 157 26 92 chr10 25919854 25920000 -119669288 - MER20 DNA MER1_type -86 133 6 636 250 0 7 chr10 25920239 25920387 -119668901 + MIR SINE MIR 26 172 -90 1925 154 13 13 chr10 25922542 25922841 -119666447 + AluJo SINE Alu 3 301 -11 469 298 19 0 chr10 25923056 25923264 -119666024 + L2 LINE L2 2545 2756 -558 189 0 0 0 chr10 25923906 25923927 -119665361 + (TTTTTA)n Simple_repeat Simple_repeat 5 25 0 * 600 153 0 0 chr10 25923926 25924044 -119665244 + (TA)n Simple_repeat Simple_repeat 1 118 0 2333 79 16 16 chr10 25924044 25924349 -119664939 - AluSx SINE Alu -7 305 1 895 157 13 26 chr10 25924375 25924528 -119664760 - FRAM SINE Alu -15 151 1 21 0 0 0 chr10 25924892 25924913 -119664375 + AT_rich Low_complexity Low_complexity 1 21 0 402 278 87 10 chr10 25925180 25925468 -119663820 + L2 LINE L2 2911 3313 0 189 275 25 38 chr10 25925576 25925656 -119663632 - MIR SINE MIR -87 175 97 908 283 102 20 chr10 25925672 25926132 -119663156 + L2 LINE L2 2304 2801 -513 330 284 0 71 chr10 25926147 25926274 -119663014 - MER94 DNA DNA -15 119 2 1169 266 64 39 chr10 25926292 25926776 -119662512 + L2 LINE L2 2815 3310 -3 304 232 14 0 chr10 25928738 25928807 -119660481 + L2 LINE L2 3238 3307 -6 543 122 12 12 chr10 25928974 25929056 -119660232 + AluJ/FRAM SINE Alu 214 295 -17 1919 141 37 7 chr10 25929390 25929688 -119659600 + AluJb SINE Alu 1 307 -5 2515 93 0 0 chr10 25931226 25931538 -119657750 - AluSx SINE Alu 0 312 1 2269 96 7 0 chr10 25932801 25933094 -119656194 - AluSx SINE Alu -17 295 1 338 200 0 0 chr10 25933717 25933787 -119655501 - AluS SINE Alu -3 299 230 1044 66 0 0 chr10 25933787 25933908 -119655380 - AluSq/x SINE Alu -192 121 1 186 133 0 0 chr10 25935343 25935373 -119653915 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 313 294 17 17 chr10 25936528 25936647 -119652641 - MIR SINE MIR -30 232 114 193 273 0 61 chr10 25937101 25937167 -119652121 - MIR SINE MIR -111 151 90 400 240 47 16 chr10 25937267 25937396 -119651892 - MIR SINE MIR -63 199 67 1778 175 45 0 chr10 25937399 25937685 -119651603 + AluJb SINE Alu 1 299 -13 1240 99 6 11 chr10 25937750 25937931 -119651357 + L1PB3 LINE L1 5968 6147 -7 1554 160 53 11 chr10 25938489 25938771 -119650517 + AluJb SINE Alu 1 294 -18 364 279 121 46 chr10 25939097 25939377 -119649911 - MARNA DNA Mariner -13 573 273 2301 109 3 6 chr10 25939399 25939712 -119649576 + AluSx SINE Alu 1 312 0 306 0 0 0 chr10 25940133 25940167 -119649121 + (TG)n Simple_repeat Simple_repeat 2 35 0 195 42 0 0 chr10 25940206 25940230 -119649058 + (TG)n Simple_repeat Simple_repeat 2 25 0 186 133 0 0 chr10 25940269 25940299 -119648989 + (TG)n Simple_repeat Simple_repeat 2 31 0 267 31 0 0 chr10 25940338 25940370 -119648918 + (TG)n Simple_repeat Simple_repeat 2 33 0 794 147 8 0 chr10 25940749 25940878 -119648410 + FLAM_C SINE Alu 1 130 -3 180 163 0 0 chr10 25941012 25941055 -119648233 + A-rich Low_complexity Low_complexity 1 43 0 2691 39 0 3 chr10 25941685 25941997 -119647291 - AluY SINE Alu 0 311 1 225 65 0 0 chr10 25942189 25942220 -119647068 + (T)n Simple_repeat Simple_repeat 1 31 0 203 263 0 92 chr10 25942565 25942641 -119646647 - L2 LINE L2 -53 3219 3151 1767 168 17 0 chr10 25942659 25942951 -119646337 + AluSg SINE Alu 1 297 -13 458 345 26 9 chr10 25943486 25943718 -119645570 - Charlie8 DNA MER1_type -2172 245 10 353 321 36 21 chr10 25944907 25945047 -119644241 - MER5B DNA MER1_type -1 177 36 2369 298 104 25 chr10 25946503 25947931 -119641357 + L1MEc LINE L1 45 1586 -4810 2278 240 78 6 chr10 25947929 25948613 -119640675 + L1M4 LINE L1 3589 4321 -1825 * 294 169 26 52 chr10 25948617 25948694 -119640594 + L1ME LINE L1 5770 5844 -322 252 235 153 31 chr10 25949226 25949246 -119640042 - L2 LINE L2 0 3313 3297 2592 108 19 100 chr10 25949246 25949718 -119639570 - Tigger2a DNA MER2_type 0 434 1 252 235 153 31 chr10 25949718 25949795 -119639493 - L2 LINE L2 -16 3297 3204 312 250 20 20 chr10 25949830 25949930 -119639358 + MIR SINE MIR 36 135 -73 429 259 18 0 chr10 25950134 25950246 -119639042 + MER5B DNA MER1_type 10 123 -55 192 258 97 21 chr10 25950652 25950745 -119638543 - L2 LINE L2 -294 3019 2920 689 87 0 0 chr10 25950748 25950840 -119638448 + AluSg/x SINE Alu 209 300 -9 1329 143 14 21 chr10 25951120 25951356 -119637932 + L1M3 LINE L1 5441 5664 -519 1943 105 0 25 chr10 25951387 25951663 -119637625 + AluY SINE Alu 37 305 -6 517 286 102 0 chr10 25951880 25952076 -119637212 - MIR SINE MIR -45 217 2 291 318 0 23 chr10 25952815 25952944 -119636344 - MIR SINE MIR -116 146 21 922 143 0 0 chr10 25953661 25953794 -119635494 + FLAM_A SINE Alu 1 133 0 2544 70 3 3 chr10 25954699 25955012 -119634276 + AluSp SINE Alu 1 313 0 32 86 0 0 chr10 25955594 25955675 -119633613 + AT_rich Low_complexity Low_complexity 1 81 0 2234 107 0 3 chr10 25955675 25955965 -119633323 - AluSx SINE Alu -23 289 1 1832 188 3 0 chr10 25956387 25956695 -119632593 + AluJo SINE Alu 1 309 -3 327 270 104 26 chr10 25957042 25957157 -119632131 + MER5A DNA MER1_type 66 189 0 1582 145 35 75 chr10 25957475 25957793 -119631495 + AluJb SINE Alu 1 305 -7 734 192 45 0 chr10 25957921 25958077 -119631211 + L1MA4 LINE L1 6127 6289 -11 201 121 0 0 chr10 25958170 25958203 -119631085 + (TTC)n Simple_repeat Simple_repeat 1 33 0 2132 128 7 0 chr10 25958310 25958607 -119630681 + AluSx SINE Alu 1 299 -13 854 171 40 92 chr10 25960064 25960292 -119628996 + MER20 DNA MER1_type 1 216 -3 276 100 0 0 chr10 25960339 25960379 -119628909 + (TC)n Simple_repeat Simple_repeat 1 40 0 427 276 8 16 chr10 25960926 25961053 -119628235 - L2 LINE L2 0 3313 3188 605 92 0 31 chr10 25961151 25961249 -119628039 + FLAM_C SINE Alu 48 142 -1 225 0 0 0 chr10 25961249 25961274 -119628014 + (TA)n Simple_repeat Simple_repeat 2 26 0 1062 162 15 41 chr10 25961281 25961478 -119627810 + AluJb SINE Alu 118 309 -3 24 0 0 0 chr10 25961478 25961502 -119627786 + AT_rich Low_complexity Low_complexity 1 24 0 1700 125 0 106 chr10 25961509 25961661 -119627627 + AluJo SINE Alu 3 107 -205 2007 120 57 0 chr10 25961661 25961944 -119627344 + AluSx SINE Alu 1 299 -13 1700 125 0 106 chr10 25961944 25962102 -119627186 + AluJo SINE Alu 107 280 -32 714 152 0 32 chr10 25962807 25962932 -119626356 + FRAM SINE Alu 33 153 -23 1504 138 89 0 chr10 25963312 25963559 -119625729 + AluSx SINE Alu 1 269 -43 1435 154 6 115 chr10 25963605 25963935 -119625353 + AluJo SINE Alu 3 296 -6 212 167 0 0 chr10 25964220 25964256 -119625032 + (CAT)n Simple_repeat Simple_repeat 3 38 0 715 180 21 142 chr10 25965621 25965860 -119623428 + MER63A DNA MER1_type 1 210 0 1780 152 7 14 chr10 25966304 25966593 -119622695 + AluJb SINE Alu 1 287 -25 855 289 88 41 chr10 25966761 25967339 -119621949 + L2 LINE L2 2682 3313 0 1214 221 45 26 chr10 25967592 25967908 -119621380 + L1ME1 LINE L1 5818 6139 -45 2580 91 16 67 chr10 25967908 25968294 -119620994 - L1PB1 LINE L1 -1 6150 5787 2457 97 3 0 chr10 25968294 25968605 -119620683 - AluSx SINE Alu 0 312 1 2580 91 16 67 chr10 25968605 25968648 -119620640 - L1PB1 LINE L1 -364 5787 5743 1214 221 45 26 chr10 25968648 25968695 -119620593 + L1ME1 LINE L1 6139 6184 0 201 133 0 0 chr10 25969905 25969935 -119619353 + (TG)n Simple_repeat Simple_repeat 2 31 0 1558 275 124 24 chr10 25970634 25971456 -119617832 + L2 LINE L2 1715 2618 -696 1460 195 0 45 chr10 25971973 25972260 -119617028 + AluJo SINE Alu 1 274 -38 345 140 0 0 chr10 25972265 25972322 -119616966 + (CA)n Simple_repeat Simple_repeat 1 57 0 283 256 0 35 chr10 25972464 25972550 -119616738 - MIR SINE MIR -66 142 60 300 27 0 0 chr10 25973159 25973196 -119616092 + (TG)n Simple_repeat Simple_repeat 1 37 0 238 282 53 30 chr10 25973728 25973859 -119615429 + MIR SINE MIR 16 149 -113 4413 206 48 46 chr10 25974265 25974986 -119614302 - L1MD2 LINE L1 -16 6326 5608 2311 114 0 0 chr10 25974986 25975293 -119613995 - AluSg SINE Alu -3 307 1 4413 206 48 46 chr10 25975293 25975324 -119613964 - L1MD2 LINE L1 -734 5608 5579 1725 162 7 16 chr10 25975324 25975627 -119613661 + AluJb SINE Alu 5 304 -8 4413 206 48 46 chr10 25975627 25976041 -119613247 - L1MD2 LINE L1 -763 5579 5150 2205 116 0 0 chr10 25976041 25976333 -119612955 + AluSq SINE Alu 1 292 -21 4413 206 48 46 chr10 25976333 25976628 -119612660 - L1MD2 LINE L1 -1192 5150 4857 706 99 40 0 chr10 25976628 25976729 -119612559 - AluSq/x SINE Alu -206 107 3 534 161 21 0 chr10 25976743 25976836 -119612452 + L1M4 LINE L1 5189 5283 -863 3561 230 67 29 chr10 25976839 25977041 -119612247 - L1MD2 LINE L1 -1280 4849 4656 2516 70 0 10 chr10 25977041 25977355 -119611933 - AluY SINE Alu 0 311 1 3561 230 67 29 chr10 25977355 25978250 -119611038 - L1MD2 LINE L1 -1473 4656 3711 479 281 87 32 chr10 25978244 25978375 -119610913 - L1MD2 LINE L1 -853 1637 1515 * 180 0 0 0 chr10 25978375 25978395 -119610893 + (TA)n Simple_repeat Simple_repeat 2 21 0 479 281 87 32 chr10 25978395 25978580 -119610708 - L1MD2 LINE L1 -975 1515 1342 348 24 0 0 chr10 25978580 25978621 -119610667 + (TG)n Simple_repeat Simple_repeat 2 42 0 479 281 87 32 chr10 25978621 25978881 -119610407 - L1MD2 LINE L1 -1148 1342 984 811 227 91 12 chr10 25979052 25979294 -119609994 + MLT1I LTR MaLR 149 409 0 26 30 0 0 chr10 25979702 25979735 -119609553 + AT_rich Low_complexity Low_complexity 1 33 0 200 302 0 0 chr10 25980381 25980444 -119608844 - MIR SINE MIR -13 249 187 2528 152 25 23 chr10 25980459 25980508 -119608780 + Tigger2a DNA MER2_type 1 48 -2660 3375 202 79 4 chr10 25980508 25981191 -119608097 + MER50 LTR ERV1 1 734 0 2528 152 25 23 chr10 25981191 25981574 -119607714 + Tigger2a DNA MER2_type 48 434 0 190 216 307 0 chr10 25981575 25981663 -119607625 - MIR SINE MIR -90 172 58 186 300 20 0 chr10 25982127 25982177 -119607111 + MIR SINE MIR 211 261 -1 2038 100 82 4 chr10 25982220 25982499 -119606789 + AluSg SINE Alu 1 301 -9 1158 241 103 28 chr10 25982571 25983216 -119606072 + L2 LINE L2 2527 3235 -78 2364 101 0 0 chr10 25983245 25983553 -119605735 - AluSx SINE Alu -4 308 1 1306 178 38 48 chr10 25983634 25983926 -119605362 + AluJo SINE Alu 1 289 -23 725 181 116 0 chr10 25984559 25984714 -119604574 + MER5A DNA MER1_type 17 189 0 1787 179 81 27 chr10 25985707 25986076 -119603212 - MLT1B LTR MaLR -1 389 1 21 0 0 0 chr10 25986652 25986673 -119602615 + AT_rich Low_complexity Low_complexity 1 21 0 2247 127 3 6 chr10 25987963 25988277 -119601011 + AluSq SINE Alu 1 313 0 217 274 0 0 chr10 25989007 25989058 -119600230 + CT-rich Low_complexity Low_complexity 2 52 0 594 75 0 0 chr10 25989076 25989156 -119600132 + (TTCC)n Simple_repeat Simple_repeat 1 80 0 219 36 0 0 chr10 25989768 25989796 -119599492 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 13796 52 3 3 chr10 25990045 25992523 -119596765 - L1PA5 LINE L1 -1 6153 3670 1720 167 7 24 chr10 25992729 25993044 -119596244 + AluJo SINE Alu 1 310 0 183 349 0 0 chr10 25993838 25993901 -119595387 + L3b LINE CR1 1296 1358 -225 594 193 25 144 chr10 25994654 25994774 -119594514 + MER96B DNA MER1_type? 3 136 -281 2041 82 4 11 chr10 25994774 25995043 -119594245 + AluY SINE Alu 5 271 -40 594 193 25 144 chr10 25995043 25995071 -119594217 + MER96B DNA MER1_type? 136 124 -293 1376 179 0 12 chr10 25995071 25995311 -119593977 + L1MC1 LINE L1 6086 6322 -11 594 193 25 144 chr10 25995311 25995363 -119593925 + MER96B DNA MER1_type? 123 180 -237 451 206 0 0 chr10 25996460 25996533 -119592755 + AluJ/FLAM SINE Alu 2 74 -238 761 132 0 0 chr10 25997088 25997194 -119592094 + FLAM_C SINE Alu 2 107 -36 545 161 31 0 chr10 25997216 25997346 -119591942 + GA-rich Low_complexity Low_complexity 1 134 0 2328 105 0 0 chr10 25997417 25997723 -119591565 - AluSg1 SINE Alu -3 306 1 216 0 0 0 chr10 25997909 25997933 -119591355 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 2076 100 4 7 chr10 25997936 25998215 -119591073 - AluSx SINE Alu -28 284 7 2328 104 0 0 chr10 25998922 25999219 -119590069 - AluSg SINE Alu -13 297 1 1931 156 0 10 chr10 25999467 25999756 -119589532 - AluSx SINE Alu -26 286 1 716 139 0 16 chr10 25999758 25999880 -119589408 - FLAM_A SINE Alu -2 140 21 411 309 44 12 chr10 26000870 26001037 -119588251 - MIR3 SINE MIR -24 184 13 214 238 0 0 chr10 26002385 26002427 -119586861 + GA-rich Low_complexity Low_complexity 1 42 0 204 170 19 38 chr10 26004841 26004894 -119584394 + CT-rich Low_complexity Low_complexity 2 53 0 255 170 0 0 chr10 26005720 26005767 -119583521 + T-rich Low_complexity Low_complexity 1 47 0 2055 130 0 35 chr10 26006631 26006946 -119582342 + AluJb SINE Alu 1 304 -8 2890 175 29 43 chr10 26007632 26007693 -119581595 - MER73 LTR ERVL 0 644 584 2347 80 0 0 chr10 26007693 26007980 -119581308 - AluY SINE Alu -24 287 1 2890 175 29 43 chr10 26007980 26008571 -119580717 - MER73 LTR ERVL -60 584 1 913 183 0 24 chr10 26008692 26008856 -119580432 - FRAM SINE Alu -17 159 1 332 311 172 0 chr10 26009019 26009170 -119580118 + MIR SINE MIR 68 244 -18 2144 119 3 3 chr10 26009181 26009476 -119579812 + AluSx SINE Alu 1 295 -17 256 213 93 73 chr10 26010569 26010719 -119578569 - MIR SINE MIR -3 259 107 1150 258 109 39 chr10 26011631 26012062 -119577226 - MER20B DNA MER1_type -322 461 1 2003 149 0 7 chr10 26012317 26012619 -119576669 + AluSx SINE Alu 1 300 -12 553 249 18 12 chr10 26012916 26013085 -119576203 - MER5B DNA MER1_type -6 172 3 2299 129 91 10 chr10 26014547 26014942 -119574346 - MSTA LTR MaLR 0 428 2 651 155 28 79 chr10 26016093 26016127 -119573161 + L1MA5A LINE L1 6112 6146 -154 2274 99 0 0 chr10 26016127 26016419 -119572869 - AluSg SINE Alu -18 292 1 651 155 28 79 chr10 26016419 26016567 -119572721 + L1MA5A LINE L1 6146 6284 -16 318 145 43 14 chr10 26016650 26016719 -119572569 + L1MA5A LINE L1 6221 6291 -6 1508 154 47 8 chr10 26017179 26017432 -119571856 + AluJo SINE Alu 33 295 -17 463 327 54 43 chr10 26017549 26017827 -119571461 - L3 LINE CR1 -525 1052 772 1729 161 50 20 chr10 26018024 26018322 -119570966 - AluJo SINE Alu -5 307 1 617 236 71 57 chr10 26018566 26018778 -119570510 + MER20 DNA MER1_type 5 219 0 216 245 19 19 chr10 26019034 26019087 -119570201 + CT-rich Low_complexity Low_complexity 2 54 0 23 0 0 0 chr10 26019853 26019876 -119569412 + AT_rich Low_complexity Low_complexity 1 23 0 1702 150 44 49 chr10 26020002 26020369 -119568919 + MLT1A1 LTR MaLR 1 365 0 1040 258 97 27 chr10 26020461 26021124 -119568164 - L1ME3A LINE L1 -8 6162 5406 805 233 110 27 chr10 26021138 26021442 -119567846 - MLT1E LTR MaLR -3 590 316 2303 235 48 32 chr10 26021612 26022530 -119566758 - L1ME1 LINE L1 -9 6155 5253 2167 139 0 0 chr10 26022530 26022833 -119566455 - AluSx SINE Alu -8 304 2 2303 235 48 32 chr10 26022833 26023630 -119565658 - L1ME1 LINE L1 -911 5253 4470 2362 86 3 0 chr10 26023630 26023933 -119565355 + AluSx SINE Alu 1 304 -8 2303 235 48 32 chr10 26023933 26024840 -119564448 - L1ME1 LINE L1 -1694 4470 3433 2136 137 0 0 chr10 26024840 26025147 -119564141 - AluSx SINE Alu -5 307 1 2303 235 48 32 chr10 26025147 26025330 -119563958 - L1ME1 LINE L1 -2731 3433 3254 710 225 57 16 chr10 26025440 26025684 -119563604 - L1M4 LINE L1 -2237 3909 3656 441 213 0 57 chr10 26025806 26025947 -119563341 - L1 LINE L1 -2168 3978 3846 587 254 71 8 chr10 26025985 26026225 -119563063 + MIR SINE MIR 5 259 -3 271 282 100 9 chr10 26026271 26026381 -119562907 + MER115 DNA AcHobo 2 121 -572 430 315 45 6 chr10 26026486 26026664 -119562624 + MER115 DNA AcHobo 162 346 -347 513 248 0 0 chr10 26026690 26026811 -119562477 + MER115 DNA AcHobo 563 683 -10 1847 113 146 7 chr10 26027199 26027474 -119561814 + AluSq SINE Alu 1 313 0 2386 47 7 23 chr10 26027650 26027949 -119561339 + AluY SINE Alu 1 294 -17 889 219 14 35 chr10 26027997 26028376 -119560912 - MER54B LTR ERVL 0 793 453 1601 143 17 123 chr10 26029811 26030160 -119559128 + AluJo SINE Alu 1 312 0 2178 121 0 3 chr10 26031858 26032156 -119557132 + AluSx SINE Alu 1 297 -15 335 250 18 53 chr10 26032501 26032644 -119556644 + MIR SINE MIR 25 156 -52 424 204 53 26 chr10 26032646 26032759 -119556529 - MLT1J LTR MaLR 0 511 396 298 173 0 0 chr10 26032934 26032986 -119556302 - MLT1J LTR MaLR -361 150 99 331 291 23 0 chr10 26033041 26033127 -119556161 + MIR SINE MIR 174 261 -1 304 217 248 12 chr10 26033399 26033560 -119555728 - MER102b DNA MER1_type -27 314 116 301 293 75 9 chr10 26034913 26035019 -119554269 + L1ME LINE L1 712 824 -5295 468 331 55 7 chr10 26035026 26035171 -119554117 - MIR SINE MIR -83 179 28 774 285 79 29 chr10 26035259 26036007 -119553281 + L1ME LINE L1 895 1717 -4593 402 206 115 99 chr10 26036546 26036789 -119552499 + L1ME LINE L1 2264 2510 -3619 279 256 93 17 chr10 26036977 26037149 -119552139 + L1ME LINE L1 2729 2913 -3216 342 299 136 0 chr10 26037420 26037604 -119551684 + L1ME LINE L1 4784 4992 -1137 435 219 70 31 chr10 26037701 26037829 -119551459 - L2 LINE L2 -5 3308 3176 211 274 41 55 chr10 26037902 26037975 -119551313 - MIR SINE MIR -186 76 5 560 184 37 29 chr10 26038048 26038184 -119551104 + MER105 DNA DNA 47 183 -21 439 191 11 0 chr10 26038184 26038273 -119551015 + AluJ/FRAM SINE Alu 217 306 -6 310 263 137 99 chr10 26039239 26039288 -119550000 + L1ME LINE L1 5287 5333 -816 2213 111 3 16 chr10 26039288 26039604 -119549684 + AluSx SINE Alu 1 312 0 310 263 137 99 chr10 26039604 26039847 -119549441 + L1ME LINE L1 5333 5523 -626 851 150 0 8 chr10 26039853 26039986 -119549302 + AluJb SINE Alu 6 137 -175 872 243 188 25 chr10 26040156 26040886 -119548402 + L1M4 LINE L1 2113 2961 -3185 1216 131 180 71 chr10 26040983 26041250 -119548038 + AluJb SINE Alu 1 296 -6 832 228 159 31 chr10 26041286 26041769 -119547519 + MER20B DNA MER1_type 239 783 0 185 326 0 0 chr10 26041769 26041818 -119547470 + MIR3 SINE MIR 153 201 -7 387 262 134 27 chr10 26041863 26042049 -119547239 - MIR SINE MIR -27 235 14 189 94 0 0 chr10 26043080 26043112 -119546176 + (TA)n Simple_repeat Simple_repeat 2 33 0 1569 168 34 4 chr10 26045636 26045904 -119543384 + AluJb SINE Alu 1 276 -36 713 172 25 8 chr10 26046031 26046153 -119543135 - AluJb SINE Alu -186 126 3 199 316 152 38 chr10 26046519 26046677 -119542611 + MIR3 SINE MIR 31 206 -2 942 252 102 22 chr10 26046913 26047326 -119541962 + L1MC4 LINE L1 7597 8042 0 820 175 109 53 chr10 26047374 26047659 -119541629 + Zaphod DNA AcHobo 3377 3677 -354 416 244 71 24 chr10 26047700 26047868 -119541420 + L1MC5 LINE L1 7726 7901 -60 198 71 0 0 chr10 26049811 26049839 -119539449 + (A)n Simple_repeat Simple_repeat 1 28 0 584 128 21 0 chr10 26051027 26051121 -119538167 - AluJ/FRAM SINE Alu -3 309 214 330 210 0 0 chr10 26051123 26051185 -119538103 - AluJo/FLAM SINE Alu -192 110 49 963 163 326 0 chr10 26051413 26051634 -119537654 + AluJb SINE Alu 18 310 -2 309 191 0 0 chr10 26053054 26053117 -119536171 + L1MC5 LINE L1 7156 7218 -743 785 118 44 59 chr10 26053234 26053369 -119535919 + FLAM_C SINE Alu 1 133 0 631 186 322 0 chr10 26056486 26056663 -119532625 + Tigger7 DNA MER2_type 1 234 -2253 568 165 10 0 chr10 26056664 26056761 -119532527 + Tigger7 DNA MER2_type 2482 2579 -8 201 276 66 40 chr10 26057079 26057155 -119532133 + L2 LINE L2 3228 3305 -8 776 248 96 22 chr10 26057679 26057909 -119531379 + MIR SINE MIR 10 256 -6 290 241 115 11 chr10 26057971 26058058 -119531230 - MIR SINE MIR -2 260 165 185 270 0 0 chr10 26058101 26058138 -119531150 + L2 LINE L2 3249 3285 -28 2341 84 0 0 chr10 26058722 26059021 -119530267 + AluY SINE Alu 1 299 -12 22 0 0 0 chr10 26059414 26059436 -119529852 + AT_rich Low_complexity Low_complexity 1 22 0 29 60 0 0 chr10 26060393 26060443 -119528845 + AT_rich Low_complexity Low_complexity 1 50 0 222 327 71 9 chr10 26061314 26061427 -119527861 - L2 LINE L2 -249 3064 2945 1327 281 239 35 chr10 26061495 26062586 -119526702 - L2 LINE L2 -497 2817 1448 1750 73 14 5 chr10 26062586 26062806 -119526482 + AluSq SINE Alu 1 222 -91 1327 281 239 35 chr10 26062806 26062938 -119526350 - L2 LINE L2 -1866 1448 1344 24 32 0 0 chr10 26063077 26063108 -119526180 + AT_rich Low_complexity Low_complexity 1 31 0 583 329 111 19 chr10 26064543 26064972 -119524316 + L1MC4a LINE L1 4533 5005 -1141 590 285 129 16 chr10 26065222 26065477 -119523811 + L1MC4a LINE L1 5313 5538 -2270 1698 99 53 19 chr10 26065477 26065739 -119523549 + AluSq SINE Alu 40 310 -3 590 285 129 16 chr10 26065739 26065978 -119523310 + L1MC4a LINE L1 5538 5863 -1945 21 0 0 0 chr10 26068769 26068790 -119520498 + AT_rich Low_complexity Low_complexity 1 21 0 2222 92 17 0 chr10 26068964 26069258 -119520030 + AluSx SINE Alu 1 299 -13 376 314 39 69 chr10 26069998 26070290 -119518998 + MLT1K LTR MaLR 138 412 -176 2257 118 0 10 chr10 26070290 26070603 -119518685 + AluSx SINE Alu 1 310 -2 376 314 39 69 chr10 26070603 26070775 -119518513 + MLT1K LTR MaLR 412 588 0 2330 74 0 3 chr10 26071441 26071753 -119517535 + AluY SINE Alu 1 311 0 267 329 0 24 chr10 26073057 26073139 -119516149 + MIR3 SINE MIR 77 156 -52 2289 84 28 0 chr10 26073383 26073667 -119515621 + AluSg SINE Alu 5 296 -14 2301 105 0 10 chr10 26073773 26074077 -119515211 + AluSq SINE Alu 1 301 -12 252 241 213 35 chr10 26074441 26074582 -119514706 + MIR SINE MIR 20 185 -77 1917 129 10 26 chr10 26074635 26074944 -119514344 - AluSx SINE Alu -6 306 3 22 0 0 0 chr10 26074946 26074968 -119514320 + AT_rich Low_complexity Low_complexity 1 22 0 510 179 0 0 chr10 26075855 26075950 -119513338 + Charlie3 DNA MER1_type 1 95 -2615 217 211 84 42 chr10 26076801 26076872 -119512416 - MER91C DNA MER1_type -30 110 37 * 401 313 13 40 chr10 26076863 26077013 -119512275 + MIR SINE MIR 22 167 -95 819 272 57 73 chr10 26077111 26077796 -119511492 - L2 LINE L2 -3 3310 2635 25 0 0 0 chr10 26080887 26080912 -119508376 + AT_rich Low_complexity Low_complexity 1 25 0 477 0 0 0 chr10 26081302 26081355 -119507933 + (TA)n Simple_repeat Simple_repeat 2 54 0 2328 107 0 0 chr10 26083206 26083506 -119505782 - AluSx SINE Alu -10 302 3 207 267 0 0 chr10 26083919 26083964 -119505324 + GA-rich Low_complexity Low_complexity 1 45 0 216 0 0 0 chr10 26084168 26084192 -119505096 + (A)n Simple_repeat Simple_repeat 1 24 0 24 32 0 0 chr10 26084434 26084465 -119504823 + AT_rich Low_complexity Low_complexity 1 31 0 225 320 0 52 chr10 26084696 26084793 -119504495 + MIR3 SINE MIR 15 106 -102 259 350 25 33 chr10 26084817 26084937 -119504351 + MIR SINE MIR 2 120 -142 2070 156 22 14 chr10 26085155 26085515 -119503773 + MLT1A1 LTR MaLR 1 363 -2 294 143 0 0 chr10 26087641 26087690 -119501598 + (TA)n Simple_repeat Simple_repeat 2 50 0 368 250 23 0 chr10 26087695 26087783 -119501505 - L1MC4 LINE L1 -1339 6703 6614 336 284 23 0 chr10 26087719 26087807 -119501481 + L1MC4 LINE L1 6614 6703 -1339 * 279 0 0 0 chr10 26087821 26087852 -119501436 + (TA)n Simple_repeat Simple_repeat 1 31 0 2346 88 0 28 chr10 26087852 26088169 -119501119 - AluSg SINE Alu 0 310 3 1932 151 0 3 chr10 26089369 26089661 -119499627 - AluSx SINE Alu -21 291 1 1958 104 0 0 chr10 26089993 26090266 -119499022 + AluSq SINE Alu 44 316 0 1792 147 26 36 chr10 26090583 26090889 -119498399 - AluJb SINE Alu -9 303 1 23 78 0 0 chr10 26091928 26091979 -119497309 + AT_rich Low_complexity Low_complexity 1 51 0 22 0 0 0 chr10 26092449 26092471 -119496817 + AT_rich Low_complexity Low_complexity 1 22 0 928 74 0 8 chr10 26092752 26092873 -119496415 - AluSg/x SINE Alu -3 306 187 488 272 118 48 chr10 26094197 26094394 -119494894 - MIR SINE MIR -12 250 33 2196 96 3 3 chr10 26094394 26094713 -119494575 - AluSg SINE Alu 0 310 1 488 272 118 48 chr10 26094713 26094743 -119494545 - MIR SINE MIR -229 33 7 284 316 116 11 chr10 26094732 26094827 -119494461 - L2 LINE L2 -46 3226 3122 * 217 341 12 12 chr10 26094974 26095056 -119494232 - MER5B DNA MER1_type -95 83 2 810 140 260 0 chr10 26095159 26095309 -119493979 + MER5A DNA MER1_type 1 189 0 265 261 201 38 chr10 26095692 26095876 -119493412 + L2 LINE L2 3100 3313 0 233 241 234 55 chr10 26095875 26096020 -119493268 - MIR SINE MIR -58 204 34 * 2332 84 0 7 chr10 26096735 26097033 -119492255 - AluSg SINE Alu -14 296 1 21 0 0 0 chr10 26097883 26097904 -119491384 + AT_rich Low_complexity Low_complexity 1 21 0 233 377 0 0 chr10 26097965 26098042 -119491246 + MIR SINE MIR 2 78 -184 373 178 44 0 chr10 26098068 26098158 -119491130 + MER53 DNA DNA 96 189 0 543 257 46 29 chr10 26098167 26098342 -119490946 + MIR SINE MIR 85 262 0 202 244 0 0 chr10 26098402 26098447 -119490841 + L2 LINE L2 3219 3263 -9 28 79 0 0 chr10 26098734 26098797 -119490491 + AT_rich Low_complexity Low_complexity 1 63 0 819 157 0 0 chr10 26099034 26099155 -119490133 + 5S rRNA rRNA 1 121 0 23 0 0 0 chr10 26099155 26099178 -119490110 + AT_rich Low_complexity Low_complexity 1 23 0 2208 107 0 10 chr10 26100582 26100882 -119488406 + AluSg1 SINE Alu 1 297 -12 395 239 152 49 chr10 26100905 26101089 -119488199 - L1MC5 LINE L1 -60 7901 7699 2681 20 0 0 chr10 26101115 26101412 -119487876 + AluY SINE Alu 14 310 -1 332 234 0 0 chr10 26101720 26101784 -119487504 + L2 LINE L2 3245 3308 -5 300 137 0 20 chr10 26102014 26102065 -119487223 - L2 LINE L2 -2 3311 3262 274 83 0 0 chr10 26102395 26102431 -119486857 + U6 snRNA snRNA 2 37 -70 786 149 22 30 chr10 26102748 26102882 -119486406 - FLAM_C SINE Alu 0 133 1 409 294 123 72 chr10 26103336 26104049 -119485239 + L2 LINE L2 1799 2548 -766 185 309 85 21 chr10 26104045 26104139 -119485149 + L2 LINE L2 2953 3052 -220 * 1960 162 0 10 chr10 26104167 26104470 -119484818 + AluSx SINE Alu 1 300 -12 670 256 144 18 chr10 26104578 26104863 -119484425 - L2 LINE L2 -8 3305 2985 1265 171 167 0 chr10 26105238 26105477 -119483811 + AluJb SINE Alu 1 279 -33 794 186 0 0 chr10 26105496 26105620 -119483668 + FLAM_C SINE Alu 1 124 -9 402 158 85 0 chr10 26105650 26105732 -119483556 + L1MA6 LINE L1 6208 6296 -4 321 248 119 20 chr10 26106521 26106622 -119482666 - L2 LINE L2 -3 3310 3200 2065 117 10 7 chr10 26106707 26107007 -119482281 - AluSx SINE Alu -11 301 1 261 301 29 10 chr10 26107233 26107336 -119481952 - L3 LINE CR1 -284 1293 1189 2227 97 7 3 chr10 26107366 26107666 -119481622 + AluSq SINE Alu 1 301 -12 242 283 0 0 chr10 26107878 26107938 -119481350 + (TATG)n Simple_repeat Simple_repeat 3 62 0 327 240 64 72 chr10 26108836 26108961 -119480327 + L1ME LINE L1 1071 1194 -5011 263 200 35 12 chr10 26108989 26109074 -119480214 + L1ME LINE L1 1599 1685 -4711 650 160 0 113 chr10 26109093 26109243 -119480045 + FLAM_A SINE Alu 1 133 0 832 269 21 8 chr10 26110024 26110356 -119478932 + LTR16B LTR ERVL 54 442 -22 609 265 73 5 chr10 26110423 26110642 -119478646 + L1ME LINE L1 3785 4018 -2197 226 187 119 75 chr10 26110642 26110776 -119478512 + L1ME LINE L1 4575 4714 -1501 272 250 71 0 chr10 26110786 26110870 -119478418 + L1ME LINE L1 4793 4882 -1333 803 191 111 0 chr10 26110870 26111032 -119478256 - MER58C DNA MER1_type 0 215 36 743 300 78 13 chr10 26111037 26111513 -119477775 + L1ME LINE L1 4873 5379 -836 1455 233 24 5 chr10 26111528 26111905 -119477383 + L1ME LINE L1 5455 5838 -401 666 251 0 0 chr10 26111936 26112099 -119477189 - L1ME1 LINE L1 -5 6161 5999 2495 49 10 13 chr10 26112161 26112465 -119476823 + AluY SINE Alu 1 303 -8 534 210 0 67 chr10 26112465 26112584 -119476704 - FLAM_A SINE Alu -27 115 5 385 169 101 0 chr10 26112600 26112689 -119476599 - L1ME1 LINE L1 -209 5955 5858 * 11533 66 11 9 chr10 26112686 26114400 -119474888 + L1PA5 LINE L1 3853 5402 -744 2683 85 30 82 chr10 26114446 26115120 -119474168 + SVA Other Other 393 868 -603 1291 84 0 28 chr10 26115225 26115474 -119473814 + SVA Other Other 625 866 -520 6477 65 13 51 chr10 26115491 26116483 -119472805 + SVA Other Other 433 1386 0 5856 58 13 7 chr10 26116483 26117237 -119472051 + L1PA5 LINE L1 5392 6150 -4 2124 178 19 2 chr10 26117239 26117667 -119471621 + L1ME2 LINE L1 5280 5714 -460 2327 85 7 0 chr10 26117731 26118024 -119471264 - AluSp SINE Alu -18 295 1 737 183 8 0 chr10 26118082 26118213 -119471075 - FLAM_C SINE Alu -1 132 1 620 214 143 0 chr10 26118255 26118409 -119470879 + MIR SINE MIR 41 216 -46 231 188 0 0 chr10 26118438 26118486 -119470802 + (CAT)n Simple_repeat Simple_repeat 1 48 0 1074 117 6 25 chr10 26118657 26118820 -119470468 + FRAM SINE Alu 11 170 -6 206 150 25 25 chr10 26119506 26119586 -119469702 + (TTATA)n Simple_repeat Simple_repeat 4 83 0 23 0 0 0 chr10 26120670 26120693 -119468595 + AT_rich Low_complexity Low_complexity 1 23 0 592 260 95 21 chr10 26120735 26120954 -119468334 + MIR SINE MIR 15 245 -17 626 276 106 5 chr10 26121329 26121546 -119467742 - MER8 DNA MER2_type 0 239 1 2189 115 0 0 chr10 26121952 26122238 -119467050 - AluSx SINE Alu -26 286 1 644 207 50 45 chr10 26122238 26122417 -119466871 - MER20 DNA MER1_type -38 181 2 2203 100 0 3 chr10 26122684 26123005 -119466283 + AluSc SINE Alu 1 320 0 985 195 104 45 chr10 26123785 26124139 -119465149 + L1ME2 LINE L1 5742 6116 -48 1276 181 159 50 chr10 26124152 26124432 -119464856 + L1MD3 LINE L1 7547 7885 -110 2256 74 0 3 chr10 26124432 26124739 -119464549 - AluY SINE Alu 0 306 1 1276 181 159 50 chr10 26124739 26124854 -119464434 + L1MD3 LINE L1 7885 7986 -9 615 211 19 26 chr10 26125638 26125794 -119463494 - L2 LINE L2 -880 2434 2280 554 270 201 5 chr10 26126418 26126622 -119462666 - MIR SINE MIR -2 260 17 2322 186 113 32 chr10 26126629 26127188 -119462100 + MER6A DNA MER2_type 2 605 0 22 0 0 0 chr10 26127574 26127596 -119461692 + AT_rich Low_complexity Low_complexity 1 22 0 271 296 96 35 chr10 26127738 26127853 -119461435 - MIR3 SINE MIR -6 202 81 340 333 45 32 chr10 26127929 26128085 -119461203 + MIR SINE MIR 88 245 -17 21 0 0 0 chr10 26128481 26128502 -119460786 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr10 26128956 26128979 -119460309 + AT_rich Low_complexity Low_complexity 1 23 0 439 293 99 33 chr10 26129016 26129258 -119460030 + HAL1 LINE L1 1017 1274 -1233 4319 226 166 16 chr10 26129277 26130133 -119459155 + L2 LINE L2 684 1410 -1904 1677 167 16 39 chr10 26130133 26130439 -119458849 - AluJo SINE Alu -13 299 1 4319 226 166 16 chr10 26130439 26130981 -119458307 + L2 LINE L2 1410 2292 -1022 349 211 13 0 chr10 26131187 26131263 -119458025 + MLT1J1 LTR MaLR 68 144 -302 1822 213 60 70 chr10 26131292 26131989 -119457299 + L1ME1 LINE L1 4314 5003 -1143 2243 113 3 10 chr10 26131989 26132291 -119456997 + AluSx SINE Alu 1 300 -12 1822 213 60 70 chr10 26132291 26132395 -119456893 + L1ME1 LINE L1 5003 5107 -1039 289 125 36 0 chr10 26132462 26132518 -119456770 + L1ME1 LINE L1 5127 5184 -962 1822 139 14 37 chr10 26132522 26132661 -119456627 + AluJo SINE Alu 1 142 -170 2125 102 46 0 chr10 26132661 26132946 -119456342 + AluSx SINE Alu 1 298 -14 1822 139 14 37 chr10 26132946 26133101 -119456187 + AluJo SINE Alu 142 288 -24 192 152 0 0 chr10 26133124 26133157 -119456131 + (CA)n Simple_repeat Simple_repeat 2 34 0 2380 188 68 39 chr10 26133158 26133999 -119455289 + L1ME1 LINE L1 5180 6161 -5 1994 131 7 7 chr10 26134278 26134576 -119454712 + AluSx SINE Alu 4 301 -11 329 198 0 79 chr10 26134691 26134792 -119454496 - L1PA16 LINE L1 -4 6162 6070 1537 106 38 0 chr10 26134861 26135096 -119454192 + L1PB4 LINE L1 5908 6151 -5 490 296 116 5 chr10 26135125 26135324 -119453964 + MIR SINE MIR 32 252 -10 1933 119 0 58 chr10 26135331 26135641 -119453647 + AluSg SINE Alu 1 292 -18 265 283 22 43 chr10 26136214 26136306 -119452982 - L2 LINE L2 -1 3312 3223 1569 181 21 91 chr10 26136321 26136390 -119452898 - L1MD2 LINE L1 -1 6358 6286 850 135 0 8 chr10 26136390 26136523 -119452765 + FLAM_C SINE Alu 2 133 0 1569 181 21 91 chr10 26136523 26136884 -119452404 - L1MD2 LINE L1 -73 6286 5958 1047 168 13 109 chr10 26136902 26137205 -119452083 - AluSq SINE Alu -2 311 38 3416 152 3 8 chr10 26137206 26137564 -119451724 - L1MD2 LINE L1 -389 5970 5615 1736 161 60 14 chr10 26137564 26137911 -119451377 - MLT1A1 LTR MaLR -2 363 1 3416 152 3 8 chr10 26137911 26138159 -119451129 - L1MD2 LINE L1 -744 5615 5367 1865 23 0 0 chr10 26138208 26138422 -119450866 - L1PA4 LINE L1 -16 6139 5926 188 407 23 0 chr10 26138501 26138587 -119450701 - MIR SINE MIR -85 123 36 281 305 8 8 chr10 26139593 26139721 -119449567 + L1MB8 LINE L1 6046 6173 -5 630 253 131 15 chr10 26140312 26140510 -119448778 + MIR SINE MIR 20 240 -22 2161 79 7 4 chr10 26141245 26141525 -119447763 + AluY SINE Alu 21 301 -10 840 132 0 0 chr10 26141902 26142023 -119447265 - AluJb SINE Alu -13 299 179 1912 165 0 0 chr10 26142414 26142711 -119446577 + AluSx SINE Alu 1 297 -15 2251 105 0 7 chr10 26143042 26143348 -119445940 - AluSx SINE Alu -8 304 1 2054 104 0 0 chr10 26144008 26144267 -119445021 + AluSq SINE Alu 6 264 -49 1722 169 11 0 chr10 26144558 26144876 -119444412 + AluJb SINE Alu 1 321 0 254 268 12 0 chr10 26144930 26145012 -119444276 + L1ME LINE L1 5800 5882 -239 1063 145 25 133 chr10 26145312 26145553 -119443735 + AluJb SINE Alu 1 215 -97 185 319 210 42 chr10 26145648 26145767 -119443521 + L2 LINE L2 3116 3254 -18 282 246 0 142 chr10 26146464 26146518 -119442770 - MIR SINE MIR -11 197 171 2110 108 0 7 chr10 26146518 26146813 -119442475 + AluSx SINE Alu 1 293 -19 282 246 0 142 chr10 26146813 26146892 -119442396 - MIR SINE MIR -37 171 82 441 313 54 27 chr10 26147463 26147610 -119441678 - MIR3 SINE MIR -27 181 31 409 255 82 96 chr10 26147684 26147867 -119441421 - L1ME4a LINE L1 0 6121 5937 1894 148 0 14 chr10 26147867 26148158 -119441130 + AluJb SINE Alu 1 287 -25 1031 138 0 11 chr10 26148168 26148349 -119440939 + (TATATG)n Simple_repeat Simple_repeat 2 180 0 409 255 82 96 chr10 26148349 26148902 -119440386 - L1ME4a LINE L1 -193 5928 5385 2160 115 3 0 chr10 26148960 26149248 -119440040 + AluSx SINE Alu 5 293 -19 297 151 0 0 chr10 26149263 26149316 -119439972 + (CA)n Simple_repeat Simple_repeat 2 54 0 472 311 110 16 chr10 26150531 26150785 -119438503 - L2 LINE L2 -894 2420 2143 33 43 0 0 chr10 26150795 26150842 -119438446 + AT_rich Low_complexity Low_complexity 1 47 0 1102 243 60 44 chr10 26150905 26150959 -119438329 + L1ME3A LINE L1 5716 5768 -402 2140 125 13 6 chr10 26150959 26151270 -119438018 + AluSq SINE Alu 1 313 0 1102 243 60 44 chr10 26151270 26151647 -119437641 + L1ME3A LINE L1 5768 6154 -16 249 312 113 32 chr10 26151669 26151748 -119437540 + L2 LINE L2 2703 2774 -540 2260 70 0 54 chr10 26151748 26152062 -119437226 - AluSq SINE Alu -16 297 1 249 312 113 32 chr10 26152062 26152203 -119437085 + L2 LINE L2 2774 2941 -373 229 303 76 62 chr10 26152286 26152431 -119436857 + L2 LINE L2 3150 3296 -17 2389 199 60 0 chr10 26152677 26153180 -119436108 + MER68 LTR ERV1 1 533 -29 2221 123 13 0 chr10 26153182 26153525 -119435763 + AluSx SINE Alu 1 347 0 1583 230 45 68 chr10 26153592 26153700 -119435588 + MLT1E LTR MaLR 28 137 -456 2110 129 7 0 chr10 26153700 26153994 -119435294 + AluSx SINE Alu 5 300 -12 1583 230 45 68 chr10 26153994 26154458 -119434830 + MLT1E LTR MaLR 137 587 -6 653 228 127 47 chr10 26154468 26154931 -119434357 + L1MEc LINE L1 79 622 -5774 723 314 61 19 chr10 26155012 26155423 -119433865 + HERV16 LTR ERVL 1002 1429 -3567 230 174 0 22 chr10 26155748 26155794 -119433494 + GA-rich Low_complexity Low_complexity 4 48 0 2376 89 0 9 chr10 26155984 26156300 -119432988 + AluSq SINE Alu 1 313 0 237 287 139 41 chr10 26156682 26156804 -119432484 - MIR3 SINE MIR -19 189 56 2234 87 3 0 chr10 26157727 26158034 -119431254 - AluSx SINE Alu 0 308 1 473 275 188 5 chr10 26158101 26158308 -119430980 + MIR SINE MIR 18 262 0 437 247 160 33 chr10 26159233 26159383 -119429905 - MER5A DNA MER1_type -12 177 9 524 277 171 27 chr10 26159873 26160244 -119429044 - L2 LINE L2 -237 3076 2660 2572 59 0 3 chr10 26160534 26160840 -119428448 - AluY SINE Alu -6 305 1 1272 170 31 18 chr10 26160981 26161204 -119428084 - AluJb SINE Alu -1 311 86 391 252 46 0 chr10 26161235 26161366 -119427922 + L1ME LINE L1 5616 5752 -369 22 0 0 0 chr10 26161655 26161677 -119427611 + AT_rich Low_complexity Low_complexity 1 22 0 350 313 146 26 chr10 26161752 26161985 -119427303 - MIR SINE MIR 0 262 2 646 257 69 10 chr10 26162290 26162492 -119426796 + Charlie8 DNA MER1_type 2 215 -2202 1866 134 42 23 chr10 26162688 26162867 -119426421 - AluJb SINE Alu 0 312 123 2167 120 3 13 chr10 26162867 26163176 -119426112 - AluSx SINE Alu -4 308 3 1866 134 42 23 chr10 26163176 26163302 -119425986 - AluJb SINE Alu -189 123 1 253 283 151 46 chr10 26165623 26165775 -119423513 + MIR SINE MIR 79 246 -16 652 306 133 28 chr10 26165807 26166373 -119422915 + L2 LINE L2 2130 2754 -560 208 336 164 0 chr10 26166617 26166739 -119422549 + L2 LINE L2 2085 2226 -1088 2936 160 34 24 chr10 26166844 26167432 -119421856 - L1PB4 LINE L1 -5 6151 5558 2114 180 9 32 chr10 26167435 26167865 -119421423 + L1 LINE L1 3256 3694 -2452 1735 187 3 7 chr10 26167865 26168164 -119421124 + AluJo SINE Alu 1 298 -14 2114 180 9 32 chr10 26168164 26168180 -119421108 + L1 LINE L1 3694 3709 -2437 225 0 0 0 chr10 26168180 26168205 -119421083 + (CAA)n Simple_repeat Simple_repeat 3 27 0 2114 180 9 32 chr10 26168205 26168285 -119421003 + L1 LINE L1 3709 3771 -2375 487 288 87 93 chr10 26168735 26169058 -119420230 + L2 LINE L2 2944 3264 -8 2178 118 0 0 chr10 26169228 26169525 -119419763 + AluSg SINE Alu 6 302 -8 303 234 0 0 chr10 26169526 26169603 -119419685 + GA-rich Low_complexity Low_complexity 1 77 0 373 185 111 85 chr10 26170239 26170331 -119418957 + MLT1D LTR MaLR 12 100 -367 2059 126 7 7 chr10 26170331 26170625 -119418663 - AluSx SINE Alu -18 294 1 373 185 111 85 chr10 26170625 26170757 -119418531 + MLT1D LTR MaLR 100 256 -211 1901 153 46 6 chr10 26170774 26171101 -119418187 + MER2 DNA MER2_type 1 340 -4 24 32 0 0 chr10 26171839 26171870 -119417418 + AT_rich Low_complexity Low_complexity 1 31 0 832 142 0 8 chr10 26172048 26172182 -119417106 - FLAM_C SINE Alu 0 133 1 2377 88 13 0 chr10 26173162 26173469 -119415819 + AluY SINE Alu 1 311 0 343 267 0 0 chr10 26175543 26175618 -119413670 - MIR SINE MIR -185 77 3 1723 120 39 25 chr10 26175619 26175931 -119413357 + AluJo SINE Alu 1 316 0 1488 167 26 34 chr10 26176284 26176553 -119412735 + AluJo SINE Alu 1 267 -45 1148 119 0 0 chr10 26176600 26176751 -119412537 + AluSq/x SINE Alu 1 151 -162 1455 161 66 49 chr10 26177004 26177309 -119411979 - AluJb SINE Alu -2 310 1 2287 105 0 3 chr10 26178255 26178551 -119410737 - AluSx SINE Alu -15 297 3 207 0 0 0 chr10 26178943 26178966 -119410322 + (TTTG)n Simple_repeat Simple_repeat 3 25 0 1598 126 114 11 chr10 26179406 26179677 -119409611 + AluSg SINE Alu 1 299 -11 27 29 0 0 chr10 26180528 26180562 -119408726 + AT_rich Low_complexity Low_complexity 1 34 0 829 138 29 36 chr10 26181087 26181225 -119408063 + FLAM_C SINE Alu 1 137 -6 347 282 74 20 chr10 26181273 26181422 -119407866 + HAL1b LINE L1 58 214 -1134 393 253 99 50 chr10 26181483 26181665 -119407623 + MLT1J LTR MaLR 71 261 -250 468 176 0 0 chr10 26181669 26181754 -119407534 + MER53 DNA DNA 1 85 -104 295 202 10 71 chr10 26181685 26181784 -119407504 - MER53 DNA DNA -7 182 90 * 183 80 0 0 chr10 26181785 26181810 -119407478 + (A)n Simple_repeat Simple_repeat 1 25 0 825 178 14 7 chr10 26181869 26182015 -119407273 + AluJo SINE Alu 5 151 -161 519 213 0 0 chr10 26182024 26182118 -119407170 - AluJ/FLAM SINE Alu -217 95 2 996 231 42 5 chr10 26182250 26182466 -119406822 - MER58A DNA MER1_type 0 224 1 2182 114 3 7 chr10 26182499 26182798 -119406490 - AluSq SINE Alu -15 298 1 25 0 0 0 chr10 26182873 26182898 -119406390 + AT_rich Low_complexity Low_complexity 1 25 0 804 176 0 0 chr10 26182900 26183025 -119406263 - FLAM_C SINE Alu -18 125 1 225 282 77 0 chr10 26183134 26183212 -119406076 - MLT1J LTR MaLR -52 459 376 322 133 0 167 chr10 26183275 26183317 -119405971 - MER53 DNA DNA 0 189 167 1946 112 0 76 chr10 26183317 26183643 -119405645 - AluSg SINE Alu 0 303 1 322 133 0 167 chr10 26183643 26183689 -119405599 - MER53 DNA DNA -22 167 115 1292 152 0 27 chr10 26183690 26183914 -119405374 - AluJo SINE Alu -11 301 84 216 0 0 0 chr10 26184032 26184056 -119405232 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 2264 68 0 7 chr10 26184058 26184337 -119404951 - AluSg1 SINE Alu -32 277 1 302 261 42 2 chr10 26184367 26184500 -119404788 + L1P5 LINE L1 5306 5442 -712 1773 92 0 9 chr10 26184715 26184944 -119404344 + AluSg/x SINE Alu 65 291 -21 1123 273 64 8 chr10 26185042 26185430 -119403858 + L2 LINE L2 2389 2798 -516 650 219 89 113 chr10 26185525 26185895 -119403393 + L2 LINE L2 2936 3296 -17 681 266 0 0 chr10 26185909 26186067 -119403221 + FRAM SINE Alu 4 161 -5 328 123 15 15 chr10 26186071 26186136 -119403152 + A-rich Low_complexity Low_complexity 4 68 0 227 180 0 80 chr10 26186269 26186319 -119402969 + Alu SINE Alu 123 168 -135 460 139 0 14 chr10 26186319 26186391 -119402897 + AluJ/FLAM SINE Alu 15 85 -227 1764 144 118 9 chr10 26186715 26187063 -119402225 + LOR1b LTR ERV1 1 386 -75 2280 93 7 0 chr10 26187076 26187365 -119401923 + AluSc SINE Alu 1 291 -18 24 32 0 0 chr10 26187426 26187457 -119401831 + AT_rich Low_complexity Low_complexity 1 31 0 24 32 0 0 chr10 26187463 26187494 -119401794 + AT_rich Low_complexity Low_complexity 1 31 0 28 0 0 0 chr10 26187505 26187533 -119401755 + AT_rich Low_complexity Low_complexity 1 28 0 232 259 23 23 chr10 26187543 26187674 -119401614 + (TTTA)n Simple_repeat Simple_repeat 3 133 0 2235 119 0 0 chr10 26187897 26188199 -119401089 - AluSq SINE Alu -11 302 1 234 0 0 0 chr10 26189311 26189337 -119399951 + (A)n Simple_repeat Simple_repeat 1 26 0 2190 99 3 3 chr10 26189625 26189919 -119399369 + AluSx SINE Alu 1 294 -18 2032 123 35 0 chr10 26190869 26191154 -119398134 - AluSx SINE Alu -17 295 1 1180 218 45 42 chr10 26191380 26191442 -119397846 + Charlie2 DNA MER1_type 2426 2486 -376 1585 185 3 54 chr10 26191442 26191755 -119397533 + AluJo SINE Alu 1 297 -15 1477 181 34 31 chr10 26191760 26192052 -119397236 + AluJo SINE Alu 3 295 -17 1180 218 45 42 chr10 26192052 26192160 -119397128 + Charlie2 DNA MER1_type 2489 2595 -267 2079 128 3 13 chr10 26192160 26192473 -119396815 - AluSx SINE Alu -2 310 1 1180 218 45 42 chr10 26192473 26192695 -119396593 + Charlie2 DNA MER1_type 2595 2826 -36 2594 67 0 3 chr10 26193191 26193527 -119395761 - AluY SINE Alu 0 335 1 297 0 0 0 chr10 26193659 26193692 -119395596 + (TG)n Simple_repeat Simple_repeat 2 34 0 1822 172 0 0 chr10 26193693 26193978 -119395310 - AluSx SINE Alu -27 285 1 1459 155 4 4 chr10 26194091 26194317 -119394971 + AluSx SINE Alu 61 286 -26 1900 134 14 7 chr10 26194927 26195210 -119394078 + AluSx SINE Alu 1 285 -27 29 0 0 0 chr10 26195210 26195239 -119394049 + AT_rich Low_complexity Low_complexity 1 29 0 471 288 78 29 chr10 26195778 26195983 -119393305 - MIR SINE MIR -42 220 6 2145 107 11 0 chr10 26196061 26196364 -119392924 + AluSx SINE Alu 1 306 0 225 128 0 0 chr10 26196365 26196404 -119392884 + L1MDa LINE L1 83 121 -6419 * 4292 135 67 52 chr10 26196403 26197092 -119392196 + L1MD1 LINE L1 5378 6083 -159 2393 79 0 25 chr10 26197092 26197410 -119391878 - AluSq SINE Alu -3 310 1 4292 135 67 52 chr10 26197410 26197562 -119391726 + L1MD1 LINE L1 6083 6231 -11 2113 135 0 10 chr10 26197707 26198018 -119391270 + AluSx SINE Alu 1 308 -4 263 158 0 0 chr10 26198270 26198327 -119390961 - L1MB3 LINE L1 0 6183 6127 678 152 22 36 chr10 26198354 26198462 -119390826 - L1MB3 LINE L1 -245 5938 5831 1603 191 10 10 chr10 26198462 26198760 -119390528 - AluJo SINE Alu -14 298 1 678 152 22 36 chr10 26198760 26198789 -119390499 - L1MB3 LINE L1 -352 5831 5803 2235 83 3 38 chr10 26198789 26199103 -119390185 + AluSx SINE Alu 1 303 -9 1866 133 4 4 chr10 26199180 26199451 -119389837 + AluJb SINE Alu 18 288 -24 1822 161 10 73 chr10 26199465 26199876 -119389412 - L1MB3 LINE L1 -377 5806 5422 809 21 21 0 chr10 26200187 26200284 -119389004 - AluY SINE Alu -3 308 210 817 165 8 8 chr10 26200306 26200439 -119388849 - FLAM_C SINE Alu 0 133 1 1275 111 6 11 chr10 26200555 26200736 -119388552 - AluSx SINE Alu -131 181 2 26 0 0 0 chr10 26200736 26200762 -119388526 + AT_rich Low_complexity Low_complexity 1 26 0 191 250 27 88 chr10 26200891 26201039 -119388249 + L2 LINE L2 2948 3086 -186 795 196 0 0 chr10 26201149 26201282 -119388006 + FLAM_C SINE Alu 1 133 0 1978 117 185 27 chr10 26201296 26201663 -119387625 - MSTA LTR MaLR -3 425 1 246 296 148 0 chr10 26202483 26202571 -119386717 + L3 LINE CR1 1449 1549 -28 231 215 15 15 chr10 26203729 26203794 -119385494 + L1MC4 LINE L1 6639 6703 -1339 216 111 0 0 chr10 26203794 26203830 -119385458 + (TA)n Simple_repeat Simple_repeat 2 37 0 2049 125 7 20 chr10 26203913 26204210 -119385078 - AluSx SINE Alu -19 293 1 2140 128 0 10 chr10 26204225 26204537 -119384751 - AluSx SINE Alu -3 309 1 4827 129 52 45 chr10 26204919 26204999 -119384289 + Tigger3b DNA MER2_type 1 79 -2949 2033 123 0 14 chr10 26204999 26205321 -119383967 + AluSx SINE Alu 1 312 0 4827 129 52 45 chr10 26205321 26205866 -119383422 + Tigger3b DNA MER2_type 79 638 -2390 2022 144 0 0 chr10 26205866 26206164 -119383124 + AluSx SINE Alu 1 298 -14 4827 129 52 45 chr10 26206164 26206458 -119382830 + Tigger3b DNA MER2_type 638 928 -303 704 160 0 69 chr10 26206581 26206712 -119382576 + FLAM_C SINE Alu 2 123 -10 23 0 0 0 chr10 26206712 26206735 -119382553 + AT_rich Low_complexity Low_complexity 1 23 0 387 41 0 0 chr10 26208032 26208081 -119381207 + (TC)n Simple_repeat Simple_repeat 1 49 0 242 346 71 30 chr10 26208083 26208378 -119380910 + L2 LINE L2 2183 2489 -825 485 91 13 0 chr10 26208494 26208571 -119380717 + L1MA9 LINE L1 6234 6311 -1 209 30 61 0 chr10 26208712 26208745 -119380543 + (TTTA)n Simple_repeat Simple_repeat 4 38 0 904 176 0 20 chr10 26208749 26208902 -119380386 - AluJb SINE Alu -23 289 140 1849 140 43 10 chr10 26209002 26209302 -119379986 - AluSx SINE Alu -2 310 1 23 54 0 0 chr10 26209304 26209341 -119379947 + AT_rich Low_complexity Low_complexity 1 37 0 315 151 174 0 chr10 26209848 26209934 -119379354 + L1M4 LINE L1 4296 4396 -1750 * 495 460 21 61 chr10 26209907 26209937 -119379351 + L1MEc LINE L1 5 35 -6361 180 0 0 0 chr10 26209937 26209957 -119379331 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 495 460 21 61 chr10 26209957 26210304 -119378984 + L1MEc LINE L1 35 367 -6029 1755 177 20 3 chr10 26210335 26210670 -119378618 + AluJo SINE Alu 8 347 0 465 184 16 16 chr10 26210672 26210797 -119378491 + GA-rich Low_complexity Low_complexity 3 127 0 3142 245 60 12 chr10 26210804 26211721 -119377567 + L1MEc LINE L1 393 1353 -5043 249 292 0 10 chr10 26211755 26211851 -119377437 + L1MEc LINE L1 2518 2612 -3603 * 1096 204 43 26 chr10 26211822 26212167 -119377121 + L1MEc LINE L1 3740 4138 -2077 1341 121 35 65 chr10 26212171 26212196 -119377092 + AluSg/x SINE Alu 86 110 -236 2779 82 3 0 chr10 26212196 26212550 -119376738 + THE1A LTR MaLR 1 355 0 1341 121 35 65 chr10 26212550 26212792 -119376496 + AluSg/x SINE Alu 110 346 0 384 240 164 34 chr10 26213396 26213542 -119375746 + MER5A DNA MER1_type 13 177 -12 411 275 188 5 chr10 26214466 26214673 -119374615 - MIR SINE MIR 0 262 18 2092 112 18 0 chr10 26214740 26215042 -119374246 + AluSx SINE Alu 1 307 0 222 231 31 0 chr10 26215047 26215112 -119374176 - MIR SINE MIR -150 112 46 1379 197 4 0 chr10 26216944 26217193 -119372095 - L1PB4 LINE L1 0 6156 5907 1318 128 4 100 chr10 26217245 26217526 -119371762 - L1PA16 LINE L1 -230 5936 5683 1370 148 0 43 chr10 26217934 26218164 -119371124 + AluJb SINE Alu 93 312 0 2282 127 15 66 chr10 26218910 26219033 -119370255 - MLT1B LTR MaLR 0 390 262 2164 114 33 0 chr10 26219033 26219332 -119369956 - AluSx SINE Alu -3 309 1 2282 127 15 66 chr10 26219332 26219506 -119369782 - MLT1B LTR MaLR -128 262 117 1779 187 42 22 chr10 26219506 26219864 -119369424 + MLT1A1 LTR MaLR 1 365 0 2282 127 15 66 chr10 26219864 26219976 -119369312 - MLT1B LTR MaLR -273 117 1 1888 178 0 3 chr10 26220232 26220536 -119368752 + AluJo SINE Alu 1 303 -9 1655 183 7 13 chr10 26220846 26221146 -119368142 + AluJo SINE Alu 5 302 -10 930 120 0 0 chr10 26221160 26221293 -119367995 + FLAM_C SINE Alu 1 133 0 2118 137 0 0 chr10 26221919 26222212 -119367076 - AluSx SINE Alu -19 293 1 257 300 50 78 chr10 26222310 26222490 -119366798 + L2 LINE L2 3138 3312 -1 782 279 70 30 chr10 26222735 26223036 -119366252 + L3 LINE CR1 1133 1445 -132 1785 124 0 4 chr10 26223108 26223357 -119365931 - AluSx SINE Alu -47 265 18 1879 153 0 38 chr10 26223409 26223723 -119365565 + AluJo SINE Alu 1 302 -10 380 74 19 0 chr10 26223723 26223777 -119365511 - HAL1 LINE L1 -1482 1025 971 2205 131 0 0 chr10 26224771 26225083 -119364205 + AluSx SINE Alu 1 312 0 790 263 114 105 chr10 26225147 26225839 -119363449 - HAL1 LINE L1 -140 2367 1662 2196 120 0 10 chr10 26225839 26226140 -119363148 - AluSx SINE Alu -14 298 1 790 263 114 105 chr10 26226140 26226425 -119362863 - HAL1 LINE L1 -845 1662 1381 1612 182 6 42 chr10 26226758 26227071 -119362217 + AluJo SINE Alu 1 302 -10 560 262 37 0 chr10 26227252 26227416 -119361872 + MER112 DNA MER1_type 80 249 -11 462 303 105 110 chr10 26227419 26227685 -119361603 + L3 LINE CR1 580 846 -731 1470 193 44 4 chr10 26227685 26227982 -119361306 - AluJo SINE Alu 0 308 1 462 303 105 110 chr10 26227982 26228113 -119361175 + L3 LINE CR1 846 976 -601 1822 153 0 14 chr10 26228188 26228483 -119360805 - AluSx SINE Alu -21 291 1 186 43 0 0 chr10 26228540 26228563 -119360725 + (T)n Simple_repeat Simple_repeat 1 23 0 1012 166 0 6 chr10 26228682 26228851 -119360437 + AluJb SINE Alu 136 303 -9 294 189 0 19 chr10 26228863 26228916 -119360372 - Alu SINE Alu -248 54 3 57 16 0 0 chr10 26228928 26228992 -119360296 + AT_rich Low_complexity Low_complexity 1 64 0 2431 95 0 0 chr10 26229492 26229797 -119359491 + AluSg SINE Alu 1 305 -5 263 176 54 68 chr10 26230011 26230085 -119359203 + AluSp SINE Alu 97 169 -134 2161 133 0 0 chr10 26230779 26231081 -119358207 - AluSq SINE Alu -11 302 1 1627 165 7 24 chr10 26231086 26231247 -119358041 - AluJo SINE Alu -18 294 139 1962 160 10 3 chr10 26231247 26231553 -119357735 - AluJb SINE Alu -4 308 1 1627 165 7 24 chr10 26231553 26231688 -119357600 - AluJo SINE Alu -173 139 3 609 151 12 0 chr10 26231868 26231954 -119357334 + AluS SINE Alu 2 88 -225 1161 125 6 6 chr10 26232056 26232224 -119357064 - AluSx SINE Alu -144 168 1 2202 182 78 25 chr10 26232229 26232679 -119356609 + MLT2B1 LTR ERVL 5 485 -35 2635 113 83 10 chr10 26232679 26233078 -119356210 + MSTA LTR MaLR 1 428 0 2202 182 78 25 chr10 26233078 26233117 -119356171 + MLT2B1 LTR ERVL 485 520 0 758 179 0 8 chr10 26233414 26233537 -119355751 + FLAM_C SINE Alu 1 122 -11 351 316 9 26 chr10 26233776 26233890 -119355398 + L2 LINE L2 3178 3289 -24 206 326 67 0 chr10 26234203 26234292 -119354996 + MIR SINE MIR 84 146 -62 1938 127 33 0 chr10 26234363 26234669 -119354619 - AluSx SINE Alu 0 315 1 201 143 125 89 chr10 26235278 26235334 -119353954 - L2 LINE L2 -56 3257 3200 1232 263 178 61 chr10 26235765 26236907 -119352381 - L2 LINE L2 -37 3276 2009 472 325 146 36 chr10 26236942 26237305 -119351983 - L2 LINE L2 0 3272 2870 1338 130 10 0 chr10 26237411 26237611 -119351677 - AluSx SINE Alu -57 255 54 227 322 168 37 chr10 26237617 26238207 -119351081 - L2 LINE L2 -616 2698 2032 288 0 0 0 chr10 26238735 26238767 -119350521 + (CA)n Simple_repeat Simple_repeat 2 33 0 1706 141 36 7 chr10 26240492 26240769 -119348519 - AluJo SINE Alu -7 305 21 1859 159 27 3 chr10 26241053 26241348 -119347940 - AluJb SINE Alu -9 303 2 2263 122 3 0 chr10 26241721 26242032 -119347256 - AluSx SINE Alu 0 312 1 754 185 7 30 chr10 26242044 26242179 -119347109 - FLAM_C SINE Alu -1 132 1 23 0 0 29 chr10 26243254 26243270 -119346018 + AT_rich Low_complexity Low_complexity 1 16 -17 2291 86 7 3 chr10 26243270 26243561 -119345727 + AluSx SINE Alu 1 292 -20 23 0 0 29 chr10 26243561 26243578 -119345710 + AT_rich Low_complexity Low_complexity 16 33 0 593 178 178 7 chr10 26243602 26243754 -119345534 - MIR SINE MIR -1 261 84 642 200 0 0 chr10 26243786 26243891 -119345397 + AluSq/x SINE Alu 3 107 -205 202 192 19 19 chr10 26243911 26243963 -119345325 + (TAA)n Simple_repeat Simple_repeat 2 53 0 879 211 6 6 chr10 26243988 26244154 -119345134 - AluJo SINE Alu -146 166 1 304 346 29 0 chr10 26244157 26244261 -119345027 - MIR SINE MIR -60 148 42 2828 160 20 71 chr10 26244607 26244828 -119344460 + LTR64 LTR ERVK 1 232 -326 1979 114 34 20 chr10 26244828 26245125 -119344163 - AluSx SINE Alu -11 301 1 2828 160 20 71 chr10 26245125 26245491 -119343797 + LTR64 LTR ERVK 232 558 0 558 105 58 0 chr10 26245647 26245733 -119343555 + AluY SINE Alu 204 294 -17 1788 165 3 10 chr10 26245784 26246075 -119343213 + AluJo SINE Alu 1 289 -23 2200 104 4 0 chr10 26246086 26246366 -119342922 + AluSx SINE Alu 6 286 -26 252 269 65 11 chr10 26246532 26246625 -119342663 - L2 LINE L2 -6 3266 3169 1231 167 4 44 chr10 26246974 26247201 -119342087 - AluJo SINE Alu -9 303 86 358 232 29 29 chr10 26247249 26247391 -119341897 + MIR SINE MIR 11 151 -62 525 292 129 10 chr10 26247392 26247601 -119341687 + MIR SINE MIR 21 254 -8 211 363 44 0 chr10 26247613 26247704 -119341584 + MIR SINE MIR 167 261 -1 1508 192 18 59 chr10 26247794 26248132 -119341156 - MLT1D LTR MaLR -1 504 181 1241 87 0 6 chr10 26248141 26248302 -119340986 - AluSp SINE Alu -16 297 138 918 153 41 29 chr10 26248305 26248475 -119340813 - MLT1D LTR MaLR -316 189 18 1811 132 3 53 chr10 26248717 26249020 -119340268 - AluJo SINE Alu -22 290 3 1568 193 33 20 chr10 26249550 26249856 -119339432 + AluJo SINE Alu 1 310 -2 195 42 0 0 chr10 26249876 26249900 -119339388 + (TTTTC)n Simple_repeat Simple_repeat 3 26 0 641 165 83 0 chr10 26249903 26250012 -119339276 - FLAM_C SINE Alu -24 119 2 419 236 154 0 chr10 26250388 26250511 -119338777 - MIR SINE MIR -49 213 72 758 154 15 22 chr10 26250513 26250649 -119338639 + AluJb SINE Alu 85 219 -93 407 188 0 0 chr10 26250651 26250720 -119338568 + AluSp/q SINE Alu 190 258 -45 987 123 6 11 chr10 26250744 26250923 -119338365 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 892 129 79 7 chr10 26251857 26251996 -119337292 + FAM SINE Alu 18 166 -19 182 229 83 0 chr10 26252112 26252160 -119337128 + L2 LINE L2 3262 3313 0 1669 155 38 17 chr10 26252190 26252481 -119336807 + AluJo SINE Alu 1 297 -15 2816 196 22 17 chr10 26252490 26253032 -119336256 - MER44D DNA MER2_type 0 605 6 1548 152 168 0 chr10 26253495 26253804 -119335484 + MER46B DNA MER2_type 1 236 0 2113 137 0 0 chr10 26254024 26254324 -119334964 + AluSx SINE Alu 1 300 -12 22 0 0 0 chr10 26254503 26254525 -119334763 + AT_rich Low_complexity Low_complexity 1 22 0 3025 115 31 31 chr10 26254530 26254669 -119334619 - L1MB2 LINE L1 -7 6164 6026 1327 106 125 19 chr10 26254669 26254877 -119334411 + MER30 DNA MER1_type 1 230 0 3025 115 31 31 chr10 26254877 26255214 -119334074 - L1MB2 LINE L1 -144 6027 5688 1784 87 4 0 chr10 26255868 26256099 -119333189 - L1PA8 LINE L1 0 6172 5941 2437 45 0 7 chr10 26257243 26257535 -119331753 - AluY SINE Alu -20 291 2 2037 120 30 7 chr10 26257699 26257999 -119331289 - AluSq SINE Alu -6 307 1 1985 96 11 28 chr10 26258327 26258609 -119330679 - AluSq SINE Alu -5 308 32 304 263 38 0 chr10 26258649 26258729 -119330559 - L2 LINE L2 -5 3267 3185 676 270 58 39 chr10 26258753 26259012 -119330276 + Charlie7 DNA MER1_type 1 264 -2348 1933 112 9 71 chr10 26259037 26259360 -119329928 - AluSx SINE Alu -7 305 3 2558 217 35 68 chr10 26259402 26259887 -119329401 - L1MB8 LINE L1 0 6178 5678 955 32 24 0 chr10 26259887 26260013 -119329275 + (TTTC)n Simple_repeat Simple_repeat 2 130 0 1603 171 16 0 chr10 26260017 26260274 -119329014 - AluSx SINE Alu -51 261 1 2558 217 35 68 chr10 26260274 26260987 -119328301 - L1MB8 LINE L1 -503 5675 5024 1182 106 12 0 chr10 26261035 26261196 -119328092 - AluSg/x SINE Alu -17 295 133 342 253 0 10 chr10 26261196 26261295 -119327993 - L1MB8 LINE L1 -1143 5003 4906 * 3896 236 30 35 chr10 26261288 26262358 -119326930 - L1MB8 LINE L1 -1572 4574 3509 1389 146 172 4 chr10 26262358 26262625 -119326663 - AluJb SINE Alu 0 312 1 3896 236 30 35 chr10 26262625 26262735 -119326553 - L1MB8 LINE L1 -2637 3509 3400 499 106 15 0 chr10 26262740 26262806 -119326482 + AluJ/FLAM SINE Alu 2 68 -244 5965 53 0 7 chr10 26262896 26262907 -119326381 + L1P LINE L1 3042 3052 -3094 5242 69 0 0 chr10 26262907 26263527 -119325761 - L1PA5 LINE L1 -5 6149 5530 5965 53 0 7 chr10 26263527 26264283 -119325005 + L1P LINE L1 3052 3804 -2342 694 244 62 31 chr10 26264280 26264337 -119324951 - L1MB8 LINE L1 -2740 3406 3352 * 786 125 62 47 chr10 26264337 26264465 -119324823 - FLAM_C SINE Alu -3 130 1 694 244 62 31 chr10 26264465 26264731 -119324557 - L1MB8 LINE L1 -2794 3352 3073 5654 193 24 20 chr10 26264766 26266538 -119322750 + L1PBa LINE L1 1 985 -5219 1012 117 7 0 chr10 26266538 26266675 -119322613 + AluSq/x SINE Alu 1 138 -174 10329 187 26 6 chr10 26266677 26268779 -119320509 + L1 LINE L1 2230 4373 -1773 579 85 0 12 chr10 26268782 26268864 -119320424 + L1P5 LINE L1 5447 5527 -624 1876 158 3 3 chr10 26268864 26269155 -119320133 - AluJb SINE Alu -20 292 2 936 156 0 15 chr10 26269176 26269311 -119319977 - FLAM_C SINE Alu 0 133 1 1596 197 44 38 chr10 26269311 26269776 -119319512 - L1MB8 LINE L1 -3061 3085 2615 374 234 219 0 chr10 26269892 26270020 -119319268 - L1MEc LINE L1 -4699 1697 1542 751 236 117 37 chr10 26270044 26270396 -119318892 - L1MEc LINE L1 -5020 1376 997 1962 140 13 0 chr10 26270477 26270777 -119318511 - AluSx SINE Alu -8 304 1 399 256 30 57 chr10 26270893 26270972 -119318316 + L1MEc LINE L1 1515 1544 -963 2453 125 120 5 chr10 26270972 26271356 -119317932 + MSTA LTR MaLR 1 428 0 399 256 30 57 chr10 26271356 26271479 -119317809 + L1MEc LINE L1 1544 1669 -838 1698 176 63 9 chr10 26271485 26271804 -119317484 + MER7A DNA MER2_type 1 334 -12 387 290 105 15 chr10 26272124 26272270 -119317018 + MER5A DNA MER1_type 26 183 -6 1027 212 46 92 chr10 26272314 26272630 -119316658 - MER21B LTR ERV1 -107 809 497 796 230 91 34 chr10 26272629 26272938 -119316350 - MER21B LTR ERV1 -486 377 1 * 2102 140 109 18 chr10 26273001 26273387 -119315901 - MSTA LTR MaLR -2 426 6 417 281 67 28 chr10 26273411 26273589 -119315699 + MIR SINE MIR 14 198 -64 1733 162 3 26 chr10 26273597 26273899 -119315389 + AluJo SINE Alu 1 295 -17 21 0 0 0 chr10 26274267 26274288 -119315000 + AT_rich Low_complexity Low_complexity 1 21 0 223 68 85 0 chr10 26274328 26274387 -119314901 + (TA)n Simple_repeat Simple_repeat 1 64 0 2015 129 28 3 chr10 26274603 26274890 -119314398 - AluSx SINE Alu -18 294 1 606 180 0 0 chr10 26275089 26275189 -119314099 + FLAM_C SINE Alu 32 131 -12 21 0 0 0 chr10 26275189 26275210 -119314078 + AT_rich Low_complexity Low_complexity 1 21 0 1484 252 96 67 chr10 26275238 26275609 -119313679 + MLT1G1 LTR MaLR 2 361 -234 771 198 86 30 chr10 26275609 26275806 -119313482 + MER3 DNA MER1_type 2 209 0 1484 252 96 67 chr10 26275806 26275909 -119313379 + MLT1G1 LTR MaLR 361 460 -135 2239 107 3 0 chr10 26275909 26276208 -119313080 - AluSg SINE Alu -10 300 1 1484 252 96 67 chr10 26276208 26276296 -119312992 + MLT1G1 LTR MaLR 460 581 -14 1661 144 44 44 chr10 26276304 26276602 -119312686 - AluJo SINE Alu -4 308 11 376 256 0 0 chr10 26277020 26277098 -119312190 - MER91A DNA MER1_type -38 158 81 558 108 0 0 chr10 26278174 26278257 -119311031 + (CA)n Simple_repeat Simple_repeat 2 84 0 1730 163 0 18 chr10 26280907 26281190 -119308098 + AluJo SINE Alu 5 282 -30 195 308 55 22 chr10 26281760 26281851 -119307437 + MIR SINE MIR 156 249 -13 444 323 111 0 chr10 26282495 26282684 -119306604 + L3b LINE CR1 1150 1359 -224 1710 133 0 0 chr10 26282765 26283005 -119306283 - AluSx SINE Alu -72 240 1 820 166 83 7 chr10 26283006 26283151 -119306137 - AluJb SINE Alu -24 288 133 794 168 0 0 chr10 26283763 26283882 -119305406 + FLAM_A SINE Alu 13 131 -11 2076 93 41 0 chr10 26283887 26284156 -119305132 + AluSx SINE Alu 6 285 -27 889 238 32 20 chr10 26284440 26284688 -119304600 + MIR SINE MIR 12 262 0 207 0 0 0 chr10 26285829 26285852 -119303436 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1884 156 7 7 chr10 26286065 26286372 -119302916 + AluJo SINE Alu 1 307 -5 2035 144 30 0 chr10 26286393 26286692 -119302596 + AluSx SINE Alu 1 308 -4 1003 103 0 58 chr10 26286699 26286854 -119302434 + FRAM SINE Alu 27 172 -4 2180 120 0 19 chr10 26286855 26287171 -119302117 + AluSx SINE Alu 1 310 -2 2450 107 79 60 chr10 26289567 26289816 -119299472 + MSTA LTR MaLR 1 263 -165 1805 152 50 0 chr10 26289816 26290093 -119299195 - AluSx SINE Alu -21 291 1 2450 107 79 60 chr10 26290093 26290263 -119299025 + MSTA LTR MaLR 263 428 0 514 311 40 0 chr10 26290274 26290425 -119298863 + L2 LINE L2 3111 3267 -5 2288 106 0 3 chr10 26290645 26290946 -119298342 + AluSx SINE Alu 1 300 -12 510 169 38 141 chr10 26291729 26291766 -119297522 - HAL1 LINE L1 -10 2497 2458 1822 145 7 3 chr10 26291766 26292092 -119297196 + AluSx SINE Alu 1 327 0 510 169 38 141 chr10 26292092 26292266 -119297022 - HAL1 LINE L1 -49 2458 2307 760 182 15 8 chr10 26292354 26292486 -119296802 - FLAM_C SINE Alu 0 133 1 24 32 0 0 chr10 26292566 26292597 -119296691 + AT_rich Low_complexity Low_complexity 1 31 0 231 238 286 0 chr10 26292789 26292894 -119296394 - L1MC4 LINE L1 -312 7730 7596 1107 149 52 85 chr10 26292904 26292916 -119296372 + Tigger1 DNA MER2_type 2 13 -2405 1924 119 0 11 chr10 26292916 26293185 -119296103 - AluSx SINE Alu -9 303 38 1107 149 52 85 chr10 26293185 26293420 -119295868 + Tigger1 DNA MER2_type 13 241 -2177 2139 99 7 16 chr10 26293420 26293724 -119295564 - AluSx SINE Alu -7 305 5 3809 106 38 34 chr10 26293727 26294340 -119294948 + Tigger1 DNA MER2_type 1076 1690 -728 636 167 25 7 chr10 26294342 26294580 -119294708 + AluJ SINE Alu 2 301 -11 5103 111 23 8 chr10 26294580 26295310 -119293978 + Tigger1 DNA MER2_type 1678 2418 0 2075 135 0 0 chr10 26295381 26295684 -119293604 + AluSx SINE Alu 1 303 0 203 304 0 0 chr10 26295698 26295754 -119293534 + L2 LINE L2 3257 3312 -1 225 196 0 0 chr10 26296174 26296220 -119293068 + GA-rich Low_complexity Low_complexity 2 47 0 2267 128 0 0 chr10 26296626 26296938 -119292350 + AluSx SINE Alu 1 312 0 448 198 18 30 chr10 26297325 26297492 -119291796 + GA-rich Low_complexity Low_complexity 1 165 0 266 203 0 14 chr10 26297537 26297606 -119291682 + GA-rich Low_complexity Low_complexity 2 69 0 1981 132 42 3 chr10 26298351 26298640 -119290648 - AluSx SINE Alu -12 300 1 864 195 11 74 chr10 26299064 26299254 -119290034 - AluJo SINE Alu -84 228 51 1354 166 40 8 chr10 26299444 26299691 -119289597 - L1MA4A LINE L1 0 6303 6049 1814 159 7 7 chr10 26300665 26300954 -119288334 - AluJo SINE Alu -23 289 1 2021 104 4 0 chr10 26301370 26301638 -119287650 + AluSx SINE Alu 35 303 -9 228 297 11 11 chr10 26303254 26303345 -119285943 + L1MC4 LINE L1 6613 6703 -1339 1695 166 6 56 chr10 26303354 26303673 -119285615 - AluJo SINE Alu -9 303 1 292 187 75 84 chr10 26304185 26304292 -119284996 + MLT1K LTR MaLR 461 566 -22 1135 143 0 11 chr10 26304447 26304622 -119284666 - FRAM SINE Alu -6 170 1 2447 159 39 14 chr10 26305286 26305319 -119283969 - L1MA6 LINE L1 -4 6296 6265 2688 121 3 18 chr10 26305319 26305700 -119283588 + THE1C LTR MaLR 1 375 0 2447 159 39 14 chr10 26305700 26306107 -119283181 - L1MA6 LINE L1 -35 6265 5845 984 182 0 12 chr10 26306394 26306564 -119282724 - FRAM SINE Alu -7 169 2 746 150 0 17 chr10 26306643 26306763 -119282525 + FLAM_C SINE Alu 2 119 -24 180 0 0 0 chr10 26306763 26306783 -119282505 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 383 284 21 0 chr10 26306833 26306928 -119282360 + MIR SINE MIR 158 254 -8 2229 110 0 0 chr10 26306959 26307249 -119282039 + AluSg SINE Alu 1 290 -20 612 175 0 0 chr10 26307259 26307356 -119281932 - FLAM_C SINE Alu -8 135 39 274 242 125 47 chr10 26307502 26307630 -119281658 - HAL1 LINE L1 -2112 395 258 819 204 25 13 chr10 26307721 26307878 -119281410 - AluJo SINE Alu -152 160 2 2055 148 0 0 chr10 26308169 26308466 -119280822 - AluSx SINE Alu -15 297 1 307 222 14 0 chr10 26308470 26308542 -119280746 - MIR SINE MIR -101 161 89 681 103 93 0 chr10 26308544 26308641 -119280647 + AluSq/x SINE Alu 1 106 -207 2260 93 0 13 chr10 26309854 26310155 -119279133 - AluSq SINE Alu -16 297 1 485 139 25 13 chr10 26310230 26310309 -119278979 + MADE1 DNA Mariner 1 80 0 809 265 31 27 chr10 26310488 26310711 -119278577 + MIR SINE MIR 25 248 -14 1391 109 27 50 chr10 26310748 26310969 -119278319 - AluSg/x SINE Alu 0 310 95 1021 86 17 11 chr10 26311321 26311495 -119277793 + (TTTC)n Simple_repeat Simple_repeat 4 178 0 1489 178 19 11 chr10 26311504 26311841 -119277447 - AluJo SINE Alu 0 375 37 248 275 18 128 chr10 26312375 26312433 -119276855 + L2 LINE L2 2963 3005 -267 2271 107 7 0 chr10 26312433 26312742 -119276546 + AluSx SINE Alu 2 312 0 248 275 18 128 chr10 26312742 26312792 -119276496 + L2 LINE L2 3005 3059 -213 971 131 0 0 chr10 26313179 26313309 -119275979 - FLAM_A SINE Alu 0 133 4 335 181 44 0 chr10 26313503 26313663 -119275625 + (TA)n Simple_repeat Simple_repeat 2 168 0 21 36 0 0 chr10 26315502 26315530 -119273758 + AT_rich Low_complexity Low_complexity 1 28 0 1651 147 11 26 chr10 26316201 26316467 -119272821 + AluJo SINE Alu 24 285 -27 2158 119 0 28 chr10 26317650 26317968 -119271320 + AluSq SINE Alu 1 309 -4 505 202 23 31 chr10 26318078 26318207 -119271081 + L1ME3A LINE L1 6038 6165 -5 252 254 62 54 chr10 26318256 26318386 -119270902 - MIR3 SINE MIR -37 171 41 1256 169 153 8 chr10 26318439 26318577 -119270711 - AluJo SINE Alu -13 299 182 216 0 0 0 chr10 26318577 26318601 -119270687 + (TTA)n Simple_repeat Simple_repeat 1 24 0 1256 169 153 8 chr10 26318601 26318723 -119270565 - AluJo SINE Alu -130 182 1 297 0 0 0 chr10 26318996 26319029 -119270259 + (CA)n Simple_repeat Simple_repeat 2 34 0 212 360 51 23 chr10 26319575 26319750 -119269538 + L2 LINE L2 2173 2352 -962 1593 194 0 20 chr10 26319759 26320052 -119269236 + AluJb SINE Alu 1 287 -25 2073 119 30 0 chr10 26320052 26320347 -119268941 - AluSc SINE Alu -5 304 1 1646 102 16 0 chr10 26320569 26320815 -119268473 - L1MA3 LINE L1 -232 6073 5824 872 209 0 6 chr10 26321783 26321955 -119267333 + AluJo SINE Alu 123 293 -19 2234 115 0 3 chr10 26322045 26322341 -119266947 + AluSx SINE Alu 1 295 -17 931 132 0 183 chr10 26323309 26323544 -119265744 - 7SK RNA RNA -1 192 1 265 293 40 0 chr10 26323670 26323745 -119265543 + MIR SINE MIR 89 166 -96 1375 209 54 7 chr10 26323745 26324022 -119265266 + AluJo SINE Alu 1 290 -22 315 384 20 20 chr10 26324150 26324296 -119264992 + L2 LINE L2 3127 3272 0 2041 129 0 32 chr10 26324601 26324910 -119264378 + AluSx SINE Alu 1 299 -13 180 320 142 41 chr10 26325046 26325243 -119264045 + MIR SINE MIR 37 253 -9 191 260 20 0 chr10 26325577 26325627 -119263661 - MIR SINE MIR -115 147 97 305 217 0 0 chr10 26325639 26325699 -119263589 - AluJb SINE Alu -78 224 165 378 224 112 43 chr10 26325803 26325825 -119263463 - L1MA10 LINE L1 -1 6333 6312 3028 236 32 47 chr10 26325825 26326317 -119262971 - L1ME1 LINE L1 -9 6157 5659 2259 125 0 0 chr10 26326317 26326628 -119262660 + AluY SINE Alu 1 311 0 3028 236 32 47 chr10 26326628 26326719 -119262569 - L1ME1 LINE L1 -507 5659 5568 2250 132 0 0 chr10 26326719 26327030 -119262258 + AluSx SINE Alu 2 312 0 3028 236 32 47 chr10 26327030 26327415 -119261873 - L1ME1 LINE L1 -598 5568 5209 1013 202 149 10 chr10 26327420 26327722 -119261566 + L2 LINE L2 2447 2790 -524 292 320 64 74 chr10 26329622 26329685 -119259603 - MIR SINE MIR -39 223 161 1092 123 0 0 chr10 26329685 26329840 -119259448 + L1PA16 LINE L1 6010 6164 -2 292 320 64 74 chr10 26329840 26329979 -119259309 - MIR SINE MIR -101 161 23 2973 259 118 20 chr10 26330338 26331542 -119257746 + L2 LINE L2 1881 3206 -107 459 274 85 57 chr10 26331722 26331970 -119257318 - MLT1L LTR MaLR -134 481 227 472 300 106 82 chr10 26332110 26332796 -119256492 - HAL1 LINE L1 -1425 1082 380 247 48 24 24 chr10 26333056 26333098 -119256190 + (CATAT)n Simple_repeat Simple_repeat 2 43 0 1609 191 14 0 chr10 26333140 26333445 -119255843 - AluJo SINE Alu 0 309 1 341 280 9 0 chr10 26333485 26333592 -119255696 - MIR3 SINE MIR -10 198 91 490 227 67 0 chr10 26333709 26333859 -119255429 + MIR SINE MIR 103 262 0 4187 106 18 3 chr10 26333953 26335004 -119254284 + L1PA10 LINE L1 4731 5789 -379 189 229 0 0 chr10 26335004 26335052 -119254236 + (TATATG)n Simple_repeat Simple_repeat 3 50 0 2809 108 11 0 chr10 26335052 26335424 -119253864 + L1PA10 LINE L1 5782 6157 -11 2136 120 20 7 chr10 26337098 26337399 -119251889 + THE1B LTR MaLR 1 305 -59 9888 147 27 25 chr10 26337408 26339124 -119250164 + L1P LINE L1 11 1730 -4416 7334 45 9 7 chr10 26339226 26340096 -119249192 + L1PA6 LINE L1 5282 6153 -1 554 82 0 0 chr10 26340096 26340169 -119249119 + THE1B LTR MaLR 292 364 0 510 278 151 28 chr10 26340706 26340918 -119248370 + MIR SINE MIR 25 262 0 1691 123 112 0 chr10 26341001 26341261 -119248027 - AluSx SINE Alu -23 289 1 2265 107 0 7 chr10 26342194 26342493 -119246795 - AluSc SINE Alu -11 298 2 641 200 91 30 chr10 26342606 26342771 -119246517 + MER104 DNA Tc2 6 180 0 215 274 0 27 chr10 26342792 26342865 -119246423 + T-rich Low_complexity Low_complexity 4 74 0 343 158 0 0 chr10 26343054 26343111 -119246177 - Alu SINE Alu 0 302 246 2204 60 0 14 chr10 26343234 26343518 -119245770 + AluY SINE Alu 32 311 0 783 184 0 8 chr10 26344376 26344501 -119244787 + FRAM SINE Alu 23 146 -30 255 103 0 0 chr10 26344504 26344543 -119244745 + (CA)n Simple_repeat Simple_repeat 2 40 0 377 335 33 7 chr10 26345067 26345219 -119244069 + MIR SINE MIR 13 168 -94 7291 233 80 23 chr10 26345433 26348141 -119241147 + L1ME1 LINE L1 2715 5602 -564 2229 124 3 0 chr10 26348141 26348440 -119240848 - AluSx SINE Alu -12 300 1 7291 233 80 23 chr10 26348440 26348655 -119240633 + L1ME1 LINE L1 5602 5803 -363 566 60 0 12 chr10 26348662 26348746 -119240542 + (GAA)n Simple_repeat Simple_repeat 2 84 0 3414 123 35 10 chr10 26348753 26349351 -119239937 + MER4B LTR ERV1 1 779 0 1024 231 86 25 chr10 26349351 26349677 -119239611 + L1ME1 LINE L1 5834 6334 0 1316 221 132 72 chr10 26349978 26350550 -119238738 + MLT1E1 LTR MaLR 1 654 0 1557 180 14 24 chr10 26350737 26351031 -119238257 - AluJo SINE Alu -19 293 3 1246 100 0 0 chr10 26352003 26352163 -119237125 - AluSg/x SINE Alu -10 300 141 1380 192 139 9 chr10 26352769 26353092 -119236196 - MLT1A1 LTR MaLR 0 365 1 357 322 63 21 chr10 26353133 26353276 -119236012 + MLT1K LTR MaLR 190 338 -250 1908 137 3 45 chr10 26353406 26353719 -119235569 - AluJb SINE Alu -12 300 1 266 318 0 0 chr10 26353740 26353803 -119235485 + MLT1K LTR MaLR 518 580 -8 537 311 69 49 chr10 26353834 26354242 -119235046 - L1ME4a LINE L1 -295 5826 5411 1626 201 14 0 chr10 26354663 26354957 -119234331 - AluJo SINE Alu -11 301 4 815 137 0 0 chr10 26354959 26355076 -119234212 - AluJo SINE Alu -176 136 20 2201 140 6 26 chr10 26355442 26355785 -119233503 - MER1B DNA MER1_type -1 336 1 267 118 0 0 chr10 26356157 26356208 -119233080 - LTR66 LTR ERVL -169 441 391 2242 110 10 0 chr10 26356337 26356638 -119232650 + AluSp SINE Alu 1 304 -9 391 282 51 8 chr10 26357031 26357148 -119232140 - MIR SINE MIR -140 122 1 2183 104 7 3 chr10 26357528 26357837 -119231451 - AluSg SINE Alu 0 310 1 348 261 97 37 chr10 26358036 26358170 -119231118 + MIR SINE MIR 3 144 -118 1399 202 52 0 chr10 26358280 26358394 -119230894 + AluJo SINE Alu 1 108 -204 191 30 0 61 chr10 26358394 26358427 -119230861 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 1399 202 52 0 chr10 26358427 26358599 -119230689 + AluJo SINE Alu 108 302 -10 267 31 0 0 chr10 26358599 26358631 -119230657 + (GA)n Simple_repeat Simple_repeat 1 32 0 232 171 0 0 chr10 26359310 26359351 -119229937 - L1 LINE L1 -1503 4643 4603 * 2668 132 76 40 chr10 26359349 26359601 -119229687 + L1MA6 LINE L1 5362 5603 -697 900 172 0 0 chr10 26359601 26359729 -119229559 + FLAM_C SINE Alu 1 128 -5 2668 132 76 40 chr10 26359729 26359975 -119229313 + L1MA6 LINE L1 5603 5878 -422 928 234 19 10 chr10 26359972 26360102 -119229186 - L1MEc LINE L1 -6150 246 112 * 1430 156 116 7 chr10 26360102 26360377 -119228911 - AluJo SINE Alu -7 305 1 928 234 19 10 chr10 26360377 26360455 -119228833 - L1MEc LINE L1 -6284 112 36 1733 121 42 170 chr10 26362462 26362891 -119226397 - MLT1A2 LTR MaLR 0 374 1 185 355 86 0 chr10 26362891 26362984 -119226304 - MIR SINE MIR -99 163 63 300 274 47 9 chr10 26363463 26363569 -119225719 - MIR SINE MIR -50 212 103 1207 192 220 0 chr10 26363715 26363960 -119225328 + AluJo SINE Alu 1 299 -3 2442 98 37 40 chr10 26364228 26364604 -119224684 - THE1C LTR MaLR 0 375 1 2940 9 0 0 chr10 26364618 26364934 -119224354 + AluYb8 SINE Alu 1 316 -2 304 185 0 15 chr10 26365035 26365100 -119224188 + MER5A DNA MER1_type 4 67 -122 1057 142 0 0 chr10 26365104 26365252 -119224036 + FRAM SINE Alu 1 140 -36 212 180 40 0 chr10 26365277 26365327 -119223961 + MER5A DNA MER1_type 61 112 -77 312 143 148 174 chr10 26365472 26365579 -119223709 + MIR SINE MIR 60 161 -101 3914 153 45 17 chr10 26365579 26366183 -119223105 - L1MC1 LINE L1 -1 6332 5705 2105 128 3 0 chr10 26366183 26366472 -119222816 + AluSx SINE Alu 1 290 -22 3914 153 45 17 chr10 26366472 26366561 -119222727 - L1MC1 LINE L1 -628 5705 5620 312 143 148 174 chr10 26366561 26366649 -119222639 + MIR SINE MIR 161 250 -12 385 231 13 0 chr10 26366660 26366738 -119222550 - MER115 DNA AcHobo 0 693 615 606 218 35 2 chr10 26367788 26367950 -119221338 + L1MB8 LINE L1 5625 5792 -378 482 224 87 43 chr10 26367991 26368152 -119221136 + L1MB8 LINE L1 5992 6159 -19 264 30 0 0 chr10 26368152 26368185 -119221103 + (TG)n Simple_repeat Simple_repeat 2 34 0 1793 161 3 7 chr10 26368185 26368470 -119220818 - AluJb SINE Alu -28 284 1 485 246 15 52 chr10 26368488 26368622 -119220666 - FLAM_C SINE Alu -3 130 2 332 362 9 0 chr10 26368645 26368750 -119220538 + MER5A DNA MER1_type 63 168 -21 22 0 0 0 chr10 26368808 26368830 -119220458 + AT_rich Low_complexity Low_complexity 1 22 0 254 208 7 174 chr10 26368974 26369123 -119220165 + MER103 DNA DNA 42 165 -1 2015 147 0 16 chr10 26369755 26370062 -119219226 - AluSx SINE Alu -10 302 1 47 19 0 0 chr10 26370153 26370207 -119219081 + AT_rich Low_complexity Low_complexity 1 54 0 1702 176 3 19 chr10 26370656 26370969 -119218319 - AluJb SINE Alu -4 308 1 836 265 88 42 chr10 26371273 26371619 -119217669 + L2 LINE L2 2358 2686 -627 1881 160 3 10 chr10 26371619 26371925 -119217363 + AluJo SINE Alu 1 304 -8 836 265 88 42 chr10 26371925 26372247 -119217041 + L2 LINE L2 2686 3056 -257 1700 171 3 17 chr10 26372582 26372874 -119216414 - AluJo SINE Alu -24 288 1 365 331 95 6 chr10 26373319 26373488 -119215800 + MIR SINE MIR 52 235 -27 548 251 157 18 chr10 26373633 26373856 -119215432 + MIR SINE MIR 6 259 -3 1840 172 7 13 chr10 26373971 26374273 -119215015 + AluJb SINE Alu 1 300 -12 617 195 16 0 chr10 26376055 26376178 -119213110 + MIR SINE MIR 51 175 -87 1843 142 25 0 chr10 26376218 26376499 -119212789 - AluJb SINE Alu -24 288 1 1697 172 21 0 chr10 26376824 26377150 -119212138 - AluSq SINE Alu 0 332 1 234 253 156 13 chr10 26377245 26377359 -119211929 - L1MC/D LINE L1 -1901 5907 5764 1758 112 0 25 chr10 26377359 26377601 -119211687 - MER46A DNA MER2_type 0 236 1 234 253 156 13 chr10 26377601 26377640 -119211648 - L1MC/D LINE L1 -2044 5764 5732 408 337 97 48 chr10 26377654 26378096 -119211192 + L2 LINE L2 1896 2359 -955 638 232 173 42 chr10 26378214 26378550 -119210738 + L2 LINE L2 2934 3313 0 237 178 0 0 chr10 26379770 26379815 -119209473 + G-rich Low_complexity Low_complexity 2 46 0 27 0 0 0 chr10 26379816 26379843 -119209445 + GC_rich Low_complexity Low_complexity 1 27 0 201 206 0 48 chr10 26379973 26380036 -119209252 + (CCG)n Simple_repeat Simple_repeat 2 61 0 221 267 9 0 chr10 26380274 26380390 -119208898 + (CACCT)n Simple_repeat Simple_repeat 1 117 0 204 241 35 17 chr10 26381311 26381369 -119207919 - MER5A DNA MER1_type -9 180 122 2522 101 122 10 chr10 26382074 26382459 -119206829 - MSTA LTR MaLR 0 428 1 1619 188 0 7 chr10 26382776 26383058 -119206230 + AluJo SINE Alu 1 280 -32 180 0 0 0 chr10 26383068 26383088 -119206200 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1284 135 16 0 chr10 26383246 26383431 -119205857 - L1PA15 LINE L1 0 6165 5978 213 218 0 0 chr10 26383570 26383625 -119205663 + T-rich Low_complexity Low_complexity 1 55 0 2988 130 4 30 chr10 26383627 26383857 -119205431 - L1MA6 LINE L1 0 6300 6066 2085 153 24 12 chr10 26383857 26384190 -119205098 + MER1B DNA MER1_type 1 337 0 2988 130 4 30 chr10 26384190 26384458 -119204830 - L1MA6 LINE L1 -234 6066 5815 931 201 0 34 chr10 26384459 26384578 -119204710 - L1 LINE L1 -1039 5107 4995 2107 117 0 0 chr10 26384578 26384886 -119204402 - AluSx SINE Alu 0 308 1 931 201 0 34 chr10 26384886 26384969 -119204319 - L1 LINE L1 -1151 4995 4911 428 282 0 67 chr10 26386641 26386790 -119202498 + MER103 DNA DNA 16 154 -12 1940 117 3 77 chr10 26387531 26387855 -119201433 - AluSx SINE Alu -12 300 1 982 110 0 22 chr10 26387857 26387993 -119201295 - AluJo/FLAM SINE Alu -169 133 1 514 266 142 19 chr10 26388352 26388619 -119200669 - L1ME4a LINE L1 -248 5873 5574 603 286 28 11 chr10 26388926 26389104 -119200184 + MIR SINE MIR 37 217 -45 751 229 57 17 chr10 26391102 26391277 -119198011 - MER20 DNA MER1_type 0 219 38 1730 179 10 3 chr10 26391884 26392181 -119197107 + AluJb SINE Alu 1 299 -13 286 245 107 68 chr10 26392238 26392386 -119196902 + MIR SINE MIR 36 186 -63 233 342 13 0 chr10 26392733 26392812 -119196476 - L3 LINE CR1 -120 1457 1378 636 254 68 0 chr10 26393845 26394022 -119195266 + MIR SINE MIR 74 262 0 336 175 0 0 chr10 26394264 26394327 -119194961 + (TG)n Simple_repeat Simple_repeat 1 63 0 474 193 0 48 chr10 26394741 26394928 -119194360 + (TG)n Simple_repeat Simple_repeat 1 178 0 787 124 5 38 chr10 26394948 26395133 -119194155 + (TG)n Simple_repeat Simple_repeat 2 180 0 2108 136 0 0 chr10 26395984 26396292 -119192996 - AluSx SINE Alu -4 308 1 1896 146 3 23 chr10 26397530 26397831 -119191457 + AluJo SINE Alu 5 299 -13 2235 100 0 10 chr10 26397839 26398140 -119191148 + AluSx SINE Alu 1 298 -14 384 264 65 68 chr10 26398151 26398433 -119190855 + L1MB8 LINE L1 637 1122 -6341 273 304 39 20 chr10 26398783 26398885 -119190403 + L1MB8 LINE L1 1704 1807 -5656 2078 232 60 30 chr10 26398909 26398962 -119190326 + L1MB8 LINE L1 3407 3457 -4128 1870 122 0 0 chr10 26398962 26399216 -119190072 + AluSq SINE Alu 49 302 -11 2078 232 60 30 chr10 26399216 26399418 -119189870 + L1MB8 LINE L1 3457 3652 -3933 2222 114 0 3 chr10 26399418 26399717 -119189571 + AluSx SINE Alu 13 310 -2 2078 232 60 30 chr10 26399717 26400706 -119188582 + L1MB8 LINE L1 3652 7186 -399 482 235 116 39 chr10 26400711 26400932 -119188356 + L1MB8 LINE L1 7324 7578 -18 246 32 0 0 chr10 26400932 26400963 -119188325 + (TG)n Simple_repeat Simple_repeat 2 32 0 827 156 16 8 chr10 26400963 26401091 -119188197 - AluJb SINE Alu -28 284 156 24 0 0 0 chr10 26401440 26401464 -119187824 + AT_rich Low_complexity Low_complexity 1 24 0 441 0 0 0 chr10 26401966 26402015 -119187273 + (TG)n Simple_repeat Simple_repeat 2 50 0 496 259 26 0 chr10 26403142 26403258 -119186030 + MER45A DNA AcHobo 58 176 -2 1159 173 5 36 chr10 26403408 26403628 -119185660 + AluJo SINE Alu 81 293 -19 295 176 0 27 chr10 26403628 26403702 -119185586 + GA-rich Low_complexity Low_complexity 3 74 0 192 77 0 0 chr10 26403715 26403741 -119185547 + (GAAAA)n Simple_repeat Simple_repeat 5 30 0 21 0 0 0 chr10 26405122 26405143 -119184145 + AT_rich Low_complexity Low_complexity 1 21 0 379 235 0 31 chr10 26405150 26405248 -119184040 + L1MA10 LINE L1 6240 6334 0 1268 199 8 4 chr10 26405335 26405571 -119183717 + AluJb SINE Alu 49 285 -27 297 211 79 13 chr10 26405728 26405804 -119183484 + MIR SINE MIR 103 183 -79 2278 68 0 0 chr10 26406281 26406599 -119182689 - AluY SINE Alu 0 318 1 224 95 48 16 chr10 26406833 26406896 -119182392 + (TA)n Simple_repeat Simple_repeat 2 66 0 5525 34 8 0 chr10 26407514 26408131 -119181157 + L1PA4 LINE L1 5531 6152 -3 242 317 250 0 chr10 26408296 26408460 -119180828 + L3 LINE CR1 400 604 -973 2689 118 17 0 chr10 26408481 26408837 -119180451 + THE1B LTR MaLR 1 362 -2 3280 95 0 0 chr10 26408839 26409269 -119180019 + THE1B-int LTR MaLR 1 430 -1150 6493 20 0 0 chr10 26409309 26410005 -119179283 - L1PA3 LINE L1 0 6155 5460 271 295 225 0 chr10 26410105 26410234 -119179054 + MIR SINE MIR 49 206 -56 2242 113 7 0 chr10 26410249 26410551 -119178737 + AluSx SINE Alu 1 304 -8 241 286 34 122 chr10 26411013 26411339 -119177949 - L3 LINE CR1 -37 1540 1192 255 329 0 0 chr10 26411437 26411519 -119177769 + (CA)n Simple_repeat Simple_repeat 2 83 0 1953 120 16 35 chr10 26412630 26412946 -119176342 - AluSx SINE Alu -2 310 1 236 233 14 0 chr10 26414565 26414638 -119174650 + GA-rich Low_complexity Low_complexity 3 76 0 229 292 0 5 chr10 26415404 26415534 -119173754 + MIR SINE MIR 53 236 -26 847 152 0 0 chr10 26415707 26415832 -119173456 - FLAM_C SINE Alu -18 125 1 1191 274 87 19 chr10 26416078 26416457 -119172831 - MLT1I LTR MaLR -4 405 1 501 267 124 40 chr10 26416460 26416685 -119172603 + L2 LINE L2 3020 3263 -50 3083 135 45 97 chr10 26416802 26417462 -119171826 - LTR1 LTR ERV1 0 785 160 1935 125 11 21 chr10 26417743 26418030 -119171258 - AluSx SINE Alu -26 286 3 351 242 21 21 chr10 26419454 26419549 -119169739 + L2 LINE L2 3167 3261 -11 205 162 0 0 chr10 26419555 26419592 -119169696 + (CAGG)n Simple_repeat Simple_repeat 2 38 0 591 15 0 0 chr10 26420116 26420184 -119169104 + (TA)n Simple_repeat Simple_repeat 2 69 0 33 73 0 0 chr10 26420361 26420429 -119168859 + AT_rich Low_complexity Low_complexity 1 68 0 1032 133 0 0 chr10 26420429 26420609 -119168679 + (TA)n Simple_repeat Simple_repeat 1 180 0 2017 143 0 10 chr10 26420611 26420905 -119168383 - AluSx SINE Alu -21 291 1 241 277 213 0 chr10 26420935 26421029 -119168259 - L2 LINE L2 -1 3312 3199 230 158 0 0 chr10 26421170 26421208 -119168080 - LTR33 LTR ERVL -4 517 480 523 140 21 11 chr10 26421227 26421320 -119167968 - AluJ/FRAM SINE Alu 0 312 219 842 130 0 15 chr10 26421344 26421475 -119167813 - FLAM_C SINE Alu 0 143 15 591 246 34 29 chr10 26421482 26421657 -119167631 - LTR33 LTR ERVL -51 470 295 868 20 20 0 chr10 26422080 26422182 -119167106 - L1P LINE L1 -899 5247 5144 2338 39 0 0 chr10 26422182 26422463 -119166825 + L1P LINE L1 4862 5142 -1004 8101 114 15 3 chr10 26422472 26423613 -119165675 + THE1B-int LTR MaLR 427 1580 0 2772 101 8 16 chr10 26423613 26423980 -119165308 + THE1B LTR MaLR 1 364 0 540 276 291 21 chr10 26423986 26424323 -119164965 + L3 LINE CR1 652 1079 -498 2119 121 3 7 chr10 26424389 26424696 -119164592 + AluSq SINE Alu 1 306 -7 198 351 0 0 chr10 26425169 26425226 -119164062 + L2 LINE L2 3215 3271 -1 237 301 68 0 chr10 26425606 26425679 -119163609 - MIR3 SINE MIR -7 201 124 181 384 0 47 chr10 26426025 26426111 -119163177 - MIR3 SINE MIR -14 194 113 23 33 0 0 chr10 26426481 26426511 -119162777 + AT_rich Low_complexity Low_complexity 1 30 0 822 229 18 70 chr10 26429099 26429326 -119159962 - MER58A DNA MER1_type 0 224 10 180 0 0 0 chr10 26429389 26429409 -119159879 + (T)n Simple_repeat Simple_repeat 1 20 0 1774 147 0 4 chr10 26429726 26429998 -119159290 + AluJb SINE Alu 27 297 -15 852 154 28 0 chr10 26430046 26430189 -119159099 - MER2 DNA MER2_type -144 201 55 292 339 141 17 chr10 26430209 26430507 -119158781 - L3 LINE CR1 -872 705 371 216 130 0 0 chr10 26430747 26430793 -119158495 + (TA)n Simple_repeat Simple_repeat 2 47 0 1684 141 99 0 chr10 26431004 26431266 -119158022 + AluJb SINE Alu 11 298 -14 1719 144 0 0 chr10 26436445 26436688 -119152600 - AluSx SINE Alu -69 243 1 23 54 0 0 chr10 26437334 26437371 -119151917 + AT_rich Low_complexity Low_complexity 1 37 0 2048 119 0 10 chr10 26437587 26437897 -119151391 + AluSx SINE Alu 6 312 0 1223 102 0 6 chr10 26437898 26438064 -119151224 + AluSp SINE Alu 135 299 -14 1602 121 158 4 chr10 26438116 26438381 -119150907 + AluSx SINE Alu 1 306 -6 235 326 21 57 chr10 26438543 26438684 -119150604 - L2 LINE L2 -212 3060 2925 456 348 103 32 chr10 26438711 26439217 -119150071 + L2 LINE L2 1291 1832 -1482 455 291 85 0 chr10 26439397 26439596 -119149692 - L1ME3A LINE L1 -213 5957 5742 1575 242 48 88 chr10 26440538 26441310 -119147978 - HAL1 LINE L1 -567 1940 1200 2065 130 7 0 chr10 26441346 26441638 -119147650 + AluSx SINE Alu 1 294 -18 574 275 40 7 chr10 26441690 26441839 -119147449 + MLT1H LTR MaLR 75 228 -321 441 229 136 0 chr10 26441973 26442091 -119147197 + MLT1H LTR MaLR 422 555 0 1104 283 104 82 chr10 26442092 26442351 -119146937 - HAL1 LINE L1 -1305 1202 950 740 206 0 0 chr10 26442351 26442482 -119146806 - FLAM_C SINE Alu -1 132 2 1104 283 104 82 chr10 26442482 26443338 -119145950 - HAL1 LINE L1 -1557 950 62 466 292 41 23 chr10 26443349 26443520 -119145768 + LTR67 LTR ERVL 384 557 0 1635 161 62 0 chr10 26443647 26443938 -119145350 + AluJo SINE Alu 1 309 -3 315 255 117 7 chr10 26443938 26444083 -119145205 - MER103 DNA DNA -3 163 3 207 100 0 0 chr10 26444306 26444336 -119144952 + (TATG)n Simple_repeat Simple_repeat 4 33 0 * 409 62 31 0 chr10 26444335 26444400 -119144888 + (TCTA)n Simple_repeat Simple_repeat 2 68 0 536 224 109 0 chr10 26444522 26444687 -119144601 - MER63 DNA MER1_type -767 294 112 2234 118 0 0 chr10 26445410 26445707 -119143581 + AluSp SINE Alu 4 300 -13 2121 128 45 31 chr10 26446243 26446602 -119142686 + THE1B LTR MaLR 1 364 0 313 301 201 24 chr10 26447299 26447548 -119141740 - L2 LINE L2 -546 2768 2476 1877 141 3 7 chr10 26449432 26449722 -119139566 + AluJb SINE Alu 1 289 -23 1045 275 75 33 chr10 26449817 26449995 -119139293 - MLT1H LTR MaLR 0 595 426 655 11 122 0 chr10 26449995 26450085 -119139203 + L1PA5 LINE L1 6054 6154 0 1045 275 75 33 chr10 26450085 26450490 -119138798 - MLT1H LTR MaLR -169 426 1 2320 54 13 10 chr10 26450506 26450804 -119138484 - AluY SINE Alu -12 299 1 478 311 80 0 chr10 26451035 26451321 -119137967 - L1ME4a LINE L1 -224 5897 5589 1496 242 34 49 chr10 26451346 26451933 -119137355 - L1MDa LINE L1 -4704 1836 1259 * 1736 219 63 34 chr10 26451931 26452438 -119136850 + L1MC4 LINE L1 7521 8042 0 2029 96 0 22 chr10 26452458 26452729 -119136559 - AluSq SINE Alu -48 265 1 760 182 44 19 chr10 26452842 26453001 -119136287 + FRAM SINE Alu 1 163 -13 588 291 76 0 chr10 26453020 26453230 -119136058 + L1MC4 LINE L1 7639 7864 -178 22 0 0 0 chr10 26453512 26453534 -119135754 + AT_rich Low_complexity Low_complexity 1 22 0 1091 301 54 32 chr10 26453607 26454425 -119134863 - L1MEc LINE L1 -4901 1360 525 1907 158 0 0 chr10 26454521 26454827 -119134461 - AluJo SINE Alu 0 310 5 917 316 18 34 chr10 26454937 26455380 -119133908 - L1MEc LINE L1 -5625 445 10 571 257 57 23 chr10 26456629 26456804 -119132484 + MIR SINE MIR 31 211 -51 655 268 110 13 chr10 26459130 26459358 -119129930 + MIR SINE MIR 5 254 -8 317 282 0 0 chr10 26459390 26459468 -119129820 - L2 LINE L2 -14 3299 3222 2283 105 14 0 chr10 26459640 26459936 -119129352 + AluSx SINE Alu 1 300 -12 22 0 0 0 chr10 26459945 26459967 -119129321 + AT_rich Low_complexity Low_complexity 1 22 0 2457 127 61 20 chr10 26459994 26460403 -119128885 - MSTB LTR MaLR 0 426 1 2554 101 20 0 chr10 26460423 26460780 -119128508 - THE1B LTR MaLR 0 364 1 2662 128 31 0 chr10 26461475 26461888 -119127400 - MSTA LTR MaLR -2 426 1 23 0 0 0 chr10 26462510 26462533 -119126755 + AT_rich Low_complexity Low_complexity 1 23 0 1552 141 51 33 chr10 26462630 26462906 -119126382 + AluJo SINE Alu 1 281 -31 2138 112 31 0 chr10 26462906 26463199 -119126089 - AluSq SINE Alu -6 307 5 2120 151 25 3 chr10 26463293 26463685 -119125603 - L1MA7 LINE L1 0 6291 5891 370 300 0 8 chr10 26463803 26463933 -119125355 - L1ME LINE L1 -336 5785 5657 23 0 0 0 chr10 26463972 26463995 -119125293 + AT_rich Low_complexity Low_complexity 1 23 0 239 196 0 0 chr10 26464195 26464241 -119125047 - L1ME4a LINE L1 -3 6118 6073 2256 107 0 3 chr10 26464273 26464572 -119124716 + AluSq SINE Alu 1 298 -15 1007 64 6 19 chr10 26464582 26464738 -119124550 + (TTTC)n Simple_repeat Simple_repeat 2 155 0 353 325 22 51 chr10 26464777 26464818 -119124470 - MIR SINE MIR -62 146 105 1751 168 28 0 chr10 26464818 26465109 -119124179 - AluJo SINE Alu -13 299 1 353 325 22 51 chr10 26465109 26465264 -119124024 - MIR SINE MIR -103 105 4 198 0 0 0 chr10 26465680 26465702 -119123586 + (A)n Simple_repeat Simple_repeat 1 22 0 233 214 0 0 chr10 26466120 26466162 -119123126 + (CAT)n Simple_repeat Simple_repeat 1 42 0 571 259 30 8 chr10 26466216 26466347 -119122941 - MIR SINE MIR -108 154 21 7884 13 0 0 chr10 26466980 26468255 -119121033 + L1PA2 LINE L1 4879 6155 0 2265 110 0 3 chr10 26473848 26474158 -119115130 + AluSx SINE Alu 1 309 -3 771 107 42 0 chr10 26474158 26474375 -119114913 + GA-rich Low_complexity Low_complexity 1 226 0 474 18 0 0 chr10 26474377 26474432 -119114856 + (GAAA)n Simple_repeat Simple_repeat 2 56 0 1999 113 36 0 chr10 26475056 26475331 -119113957 - AluSx SINE Alu -27 285 1 189 390 25 25 chr10 26475543 26475661 -119113627 + L2 LINE L2 3137 3254 -18 1959 135 0 23 chr10 26475935 26476239 -119113049 - AluSx SINE Alu -15 297 1 197 181 29 67 chr10 26477468 26477573 -119111715 + A-rich Low_complexity Low_complexity 2 102 0 189 147 0 0 chr10 26477605 26477639 -119111649 + (GGGA)n Simple_repeat Simple_repeat 1 34 0 306 256 70 0 chr10 26478537 26478623 -119110665 + MIR SINE MIR 98 189 -73 254 331 71 52 chr10 26478863 26479017 -119110271 - L2 LINE L2 -254 3018 2862 2433 77 0 10 chr10 26479023 26479334 -119109954 - AluY SINE Alu -3 308 1 439 246 70 35 chr10 26479360 26479502 -119109786 - L2 LINE L2 -13 3300 3154 2360 96 0 0 chr10 26479562 26479864 -119109424 + AluY SINE Alu 1 302 -9 187 260 100 0 chr10 26479899 26479949 -119109339 - MIR SINE MIR -112 150 96 351 194 43 115 chr10 26480081 26480220 -119109068 + L1MA9 LINE L1 6122 6250 -62 2441 174 42 10 chr10 26481420 26481920 -119107368 - Charlie1b DNA MER1_type -7 516 1 246 368 120 0 chr10 26482293 26482410 -119106878 + L3b LINE CR1 1398 1528 -55 1089 329 94 50 chr10 26484701 26485614 -119103674 - L3 LINE CR1 -80 1497 545 454 294 165 7 chr10 26485880 26486082 -119103206 + MIR SINE MIR 10 241 -21 2252 96 0 13 chr10 26486506 26486808 -119102480 - AluY SINE Alu -13 298 1 270 302 94 20 chr10 26487011 26487213 -119102075 - L1ME LINE L1 -230 5891 5675 26 30 0 0 chr10 26487214 26487247 -119102041 + AT_rich Low_complexity Low_complexity 1 33 0 1369 150 0 10 chr10 26487273 26487480 -119101808 - AluJo SINE Alu -21 291 87 256 191 0 0 chr10 26487864 26487906 -119101382 + L2 LINE L2 3184 3225 -47 240 241 0 0 chr10 26488622 26488676 -119100612 + L3 LINE CR1 1215 1268 -309 600 219 60 13 chr10 26489250 26489401 -119099887 + MER3 DNA MER1_type 48 205 -4 647 279 55 45 chr10 26489917 26490225 -119099063 + Charlie7 DNA MER1_type 54 364 -2248 * 2278 226 139 34 chr10 26490220 26491241 -119098047 + Charlie7 DNA MER1_type 1474 2601 -11 25 51 0 0 chr10 26491307 26491346 -119097942 + AT_rich Low_complexity Low_complexity 1 39 0 325 163 272 0 chr10 26494685 26494777 -119094511 + L2 LINE L2 3196 3312 -1 21 0 0 0 chr10 26495622 26495643 -119093645 + AT_rich Low_complexity Low_complexity 1 21 0 544 297 64 39 chr10 26496515 26496798 -119092490 - L2 LINE L2 -1 3312 3023 326 189 95 0 chr10 26498027 26498101 -119091187 - MER69 DNA AcHobo -7 2519 2439 * 1087 291 123 5 chr10 26498098 26498497 -119090791 - MER69 DNA AcHobo -2055 471 26 245 272 170 14 chr10 26499490 26499637 -119089651 + MLT1-int LTR MaLR 290 459 -912 2125 106 14 0 chr10 26499714 26499997 -119089291 - AluSx SINE Alu -25 287 1 2548 152 8 15 chr10 26500007 26500480 -119088808 - L1MB2 LINE L1 -2 6169 5700 973 216 67 24 chr10 26500554 26500586 -119088702 + L1MD3 LINE L1 7713 7742 -253 2277 139 32 5 chr10 26500586 26500966 -119088322 - MLT1B LTR MaLR 0 390 1 973 216 67 24 chr10 26500966 26501188 -119088100 + L1MD3 LINE L1 7742 7978 -17 2408 69 0 0 chr10 26501256 26501547 -119087741 + AluY SINE Alu 1 291 -20 256 250 144 28 chr10 26501754 26501934 -119087354 + L1ME4a LINE L1 3438 3638 -2508 864 279 143 48 chr10 26502136 26502623 -119086665 + L1ME4a LINE L1 3870 4309 -1917 2242 100 10 0 chr10 26502623 26502922 -119086366 + AluSq SINE Alu 4 305 -8 864 279 143 48 chr10 26502922 26503031 -119086257 + L1ME4a LINE L1 4309 4406 -1820 2247 140 109 0 chr10 26503031 26503417 -119085871 + MSTA LTR MaLR 1 428 0 864 279 143 48 chr10 26503417 26503879 -119085409 + L1ME4a LINE L1 4406 4823 -1403 1428 162 57 153 chr10 26503879 26504317 -119084971 + MSTD LTR MaLR 1 396 0 864 279 143 48 chr10 26504317 26504396 -119084892 + L1ME4a LINE L1 4823 4893 -1333 2289 99 0 0 chr10 26504396 26504698 -119084590 - AluSc SINE Alu -7 302 1 864 279 143 48 chr10 26504698 26505233 -119084055 + L1ME4a LINE L1 4893 5707 -519 21 0 0 0 chr10 26505890 26505911 -119083377 + AT_rich Low_complexity Low_complexity 1 21 0 2311 96 3 22 chr10 26506397 26506711 -119082577 + AluSg SINE Alu 1 308 -2 423 0 0 0 chr10 26506944 26506991 -119082297 + (CA)n Simple_repeat Simple_repeat 2 48 0 2173 147 0 12 chr10 26507826 26508166 -119081122 + MER1B DNA MER1_type 1 336 -1 1356 210 83 35 chr10 26508275 26508698 -119080590 + LTR40c LTR ERVL 1 443 -22 242 222 104 52 chr10 26508962 26509097 -119080191 + L1ME4a LINE L1 5978 6119 -2 2528 47 3 7 chr10 26509263 26509561 -119079727 + AluY SINE Alu 1 297 -14 2196 214 16 87 chr10 26509581 26510317 -119078971 + L1PA15 LINE L1 2612 3282 -2864 2225 123 33 36 chr10 26510317 26510682 -119078606 - THE1B LTR MaLR 0 364 1 2196 214 16 87 chr10 26510682 26510781 -119078507 + L1PA15 LINE L1 3282 3387 -2759 13486 52 2 3 chr10 26510796 26513291 -119075997 + L1PA5 LINE L1 3652 6147 -7 8920 174 18 38 chr10 26513283 26515690 -119073598 + L1PA15 LINE L1 3387 5786 -379 * 1644 136 86 44 chr10 26515690 26516050 -119073238 - THE1C LTR MaLR 0 375 1 8920 174 18 38 chr10 26516050 26516423 -119072865 + L1PA15 LINE L1 5786 6165 0 382 300 55 61 chr10 26519010 26519303 -119069985 + HAL1 LINE L1 811 1101 -1406 978 279 142 22 chr10 26519326 26519995 -119069293 + HAL1 LINE L1 1169 1917 -590 2157 126 3 3 chr10 26520044 26520354 -119068934 + AluSx SINE Alu 1 310 -2 2109 125 0 0 chr10 26521005 26521293 -119067995 - AluSx SINE Alu -24 288 1 943 276 54 43 chr10 26522001 26522446 -119066842 + L2 LINE L2 2827 3276 -37 1507 134 127 14 chr10 26522454 26522730 -119066558 - MER47A DNA MER2_type 0 366 60 256 28 0 0 chr10 26522777 26522813 -119066475 - L1PA2 LINE L1 -5 6150 6115 240 250 0 0 chr10 26522813 26522865 -119066423 - MER47A DNA MER2_type -308 58 7 542 309 81 13 chr10 26522875 26523111 -119066177 - MIR SINE MIR -10 252 1 1998 156 16 24 chr10 26523146 26523524 -119065764 - THE1C LTR MaLR 0 375 1 247 389 54 6 chr10 26523981 26524148 -119065140 + MER5A DNA MER1_type 8 182 -7 313 234 85 11 chr10 26524258 26524352 -119064936 + MIR3 SINE MIR 100 200 -8 1856 161 7 0 chr10 26524919 26525223 -119064065 + AluJb SINE Alu 1 306 0 399 41 0 0 chr10 26525666 26525715 -119063573 + (CA)n Simple_repeat Simple_repeat 2 50 0 17961 43 1 29 chr10 26525752 26528285 -119061003 - L1PA5 LINE L1 -1 6153 3754 2469 72 0 3 chr10 26528285 26528589 -119060699 + AluY SINE Alu 1 303 -8 17961 43 1 29 chr10 26528589 26529696 -119059592 - L1PA5 LINE L1 -2400 3754 2617 263 30 0 0 chr10 26529695 26529728 -119059560 + L1PA5 LINE L1 2578 2610 -3536 * 2251 64 50 0 chr10 26529728 26530008 -119059280 - AluY SINE Alu -17 294 1 232 312 11 11 chr10 26530244 26530337 -119058951 + (CATATA)n Simple_repeat Simple_repeat 4 96 0 1271 194 9 0 chr10 26530407 26530624 -119058664 + MER20 DNA MER1_type 1 219 0 918 178 32 42 chr10 26531105 26531360 -119057928 + AluJo SINE Alu 2 304 -8 758 205 35 6 chr10 26531492 26531663 -119057625 - MER104 DNA MER2_type -1 179 4 1837 174 0 0 chr10 26533532 26533830 -119055458 + AluJb SINE Alu 1 298 -14 223 287 191 7 chr10 26534271 26534407 -119054881 - L3 LINE CR1 -107 1470 1310 349 257 182 7 chr10 26534508 26534656 -119054632 - L2 LINE L2 0 3313 3140 1413 148 27 0 chr10 26534851 26535074 -119054214 - AluJo SINE Alu -83 229 1 2029 134 3 10 chr10 26536575 26536865 -119052423 - AluSx SINE Alu -22 290 3 3127 181 36 34 chr10 26537052 26537342 -119051946 - LTR39 LTR ERV1 0 783 495 2152 109 10 0 chr10 26537342 26537636 -119051652 - AluSq SINE Alu -16 297 1 3127 181 36 34 chr10 26537636 26537985 -119051303 - LTR39 LTR ERV1 -288 495 143 304 107 107 0 chr10 26538038 26538094 -119051194 - L1PA10 LINE L1 -1 6167 6106 889 123 7 45 chr10 26538102 26538256 -119051032 - LTR39 LTR ERV1 -633 150 3 346 323 31 8 chr10 26538258 26538388 -119050900 + L3 LINE CR1 1438 1570 -7 2717 126 41 7 chr10 26538720 26539134 -119050154 - MSTA LTR MaLR 0 428 1 1969 131 34 0 chr10 26539210 26539508 -119049780 + AluSx SINE Alu 1 308 -4 846 125 8 16 chr10 26539863 26539991 -119049297 + FLAM_C SINE Alu 5 131 -2 242 336 89 53 chr10 26540606 26540926 -119048362 - L2 LINE L2 -16 3256 2949 1710 171 17 14 chr10 26540926 26541219 -119048069 + AluJo SINE Alu 1 294 -18 2153 111 3 7 chr10 26541219 26541525 -119047763 + AluSc SINE Alu 1 305 -4 242 336 89 53 chr10 26541525 26541619 -119047669 - L2 LINE L2 -322 2950 2826 275 319 0 0 chr10 26542428 26542500 -119046788 - L2 LINE L2 -8 3305 3234 1944 152 0 20 chr10 26543362 26543664 -119045624 + AluJo SINE Alu 1 296 -16 882 204 11 34 chr10 26544525 26544701 -119044587 - FRAM SINE Alu -4 172 1 251 307 0 40 chr10 26544763 26544838 -119044450 - L2 LINE L2 -39 3274 3203 1915 102 4 0 chr10 26544944 26545198 -119044090 + AluSq SINE Alu 1 255 -58 184 352 116 36 chr10 26545554 26545855 -119043433 + L3b LINE CR1 1109 1433 -150 189 0 0 0 chr10 26546130 26546151 -119043137 + (T)n Simple_repeat Simple_repeat 1 21 0 200 199 0 4 chr10 26546620 26546664 -119042624 + MIR SINE MIR 114 157 -51 1142 120 0 24 chr10 26546780 26546947 -119042341 - AluSg/x SINE Alu -11 301 139 398 241 52 108 chr10 26547006 26547218 -119042070 - MIR SINE MIR 0 262 63 2508 138 96 5 chr10 26547410 26547836 -119041452 + MER4C LTR ERV1 1 465 0 483 215 176 71 chr10 26547930 26548188 -119041100 + LTR16A1 LTR ERVL 82 386 -71 2081 137 3 0 chr10 26548188 26548487 -119040801 - AluSx SINE Alu -12 300 1 483 215 176 71 chr10 26548487 26548568 -119040720 + LTR16A1 LTR ERVL 386 457 0 1898 152 118 0 chr10 26548855 26549178 -119040110 - MER46B DNA MER2_type 0 236 1 264 30 0 0 chr10 26549594 26549627 -119039661 + (CAAA)n Simple_repeat Simple_repeat 1 33 0 23 33 0 0 chr10 26550351 26550381 -119038907 + AT_rich Low_complexity Low_complexity 1 30 0 525 246 89 13 chr10 26550486 26550710 -119038578 - L1ME4a LINE L1 -190 5931 5691 1748 194 0 0 chr10 26550729 26551028 -119038260 - AluJb SINE Alu -13 299 1 541 184 20 116 chr10 26551087 26551234 -119038054 + FLAM_A SINE Alu 1 133 0 1674 148 151 42 chr10 26552203 26552560 -119036728 - MSTD LTR MaLR 0 396 1 292 340 0 10 chr10 26552799 26552899 -119036389 + MIR3 SINE MIR 89 187 -21 359 273 144 15 chr10 26554515 26554647 -119034641 + MER115 DNA AcHobo 18 166 -527 799 239 17 6 chr10 26554647 26554827 -119034461 + MER5A DNA MER1_type 3 184 -5 392 245 21 11 chr10 26554836 26554930 -119034358 + MER115 DNA AcHobo 159 253 -440 688 213 65 7 chr10 26555037 26555192 -119034096 + MER115 DNA AcHobo 530 693 0 282 116 0 0 chr10 26555207 26555250 -119034038 + (TTCA)n Simple_repeat Simple_repeat 3 45 0 1386 171 92 39 chr10 26555250 26555607 -119033681 - L1M4b LINE L1 -5246 1613 1238 860 230 138 0 chr10 26555629 26555846 -119033442 - L1M4b LINE L1 -6602 257 11 21 0 0 0 chr10 26555855 26555876 -119033412 + AT_rich Low_complexity Low_complexity 1 21 0 2100 121 7 0 chr10 26555882 26556196 -119033092 + AluSx SINE Alu 1 316 0 429 273 0 0 chr10 26556199 26556276 -119033012 - L2 LINE L2 -22 3250 3174 1905 135 16 29 chr10 26557034 26557346 -119031942 + AluSx SINE Alu 1 308 -4 21 0 0 0 chr10 26557789 26557810 -119031478 + AT_rich Low_complexity Low_complexity 1 21 0 688 301 19 120 chr10 26557922 26558001 -119031287 - L2 LINE L2 -1 3271 3186 2146 118 0 7 chr10 26558001 26558298 -119030990 + AluSx SINE Alu 1 295 -17 688 301 19 120 chr10 26558298 26558643 -119030645 - L2 LINE L2 -86 3186 2890 1042 163 0 0 chr10 26559022 26559169 -119030119 + FRAM SINE Alu 1 147 -19 21698 151 31 15 chr10 26559221 26559770 -119029518 - L1MA2 LINE L1 0 7723 7184 2297 91 3 3 chr10 26559770 26560077 -119029211 - AluSg SINE Alu -3 307 1 21698 151 31 15 chr10 26560077 26562043 -119027245 - L1MA2 LINE L1 -539 7184 5251 1985 149 0 0 chr10 26562043 26562325 -119026963 - AluJb SINE Alu -30 282 1 21698 151 31 15 chr10 26562325 26563697 -119025591 - L1MA2 LINE L1 -2472 5251 3903 1790 205 0 0 chr10 26563697 26564009 -119025279 - AluJb SINE Alu 0 312 1 21698 151 31 15 chr10 26564009 26567710 -119021578 - L1MA2 LINE L1 -3820 3903 12 230 294 0 0 chr10 26568279 26568330 -119020958 + polypurine Low_complexity Low_complexity 1 51 0 1940 158 6 13 chr10 26568586 26568897 -119020391 + AluJo SINE Alu 1 309 -3 281 255 75 0 chr10 26569120 26569226 -119020062 - MER97b DNA MER1_type? -194 859 746 963 73 32 0 chr10 26569227 26569382 -119019906 + AluSc SINE Alu 156 314 0 367 141 52 104 chr10 26569382 26569517 -119019771 - MER97b DNA MER1_type? -328 725 598 5899 118 21 14 chr10 26569517 26570428 -119018860 - L1MA4A LINE L1 -1 6302 5254 1480 176 0 11 chr10 26570475 26570742 -119018546 + AluJo SINE Alu 17 280 -32 194 79 0 26 chr10 26570747 26570785 -119018503 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 2406 225 54 14 chr10 26570790 26571346 -119017942 - MER97a DNA MER1_type? -316 578 1 300 286 67 17 chr10 26572703 26572822 -119016466 + MIR3 SINE MIR 69 193 -15 1323 66 6 12 chr10 26573376 26573543 -119015745 + L1PA10 LINE L1 5994 6159 -9 1628 170 64 7 chr10 26574104 26574386 -119014902 - LTR32 LTR ERVL 0 471 174 2125 128 3 10 chr10 26574524 26574836 -119014452 + AluSx SINE Alu 1 310 -2 2154 142 0 0 chr10 26577500 26577842 -119011446 - AluSx SINE Alu 0 342 1 274 342 70 9 chr10 26578072 26578186 -119011102 - MIR SINE MIR -113 149 29 315 213 176 9 chr10 26578324 26578432 -119010856 + MER5B DNA MER1_type 46 171 -7 4801 175 52 13 chr10 26578868 26579737 -119009551 + MER4D LTR ERV1 1 903 0 1793 139 0 77 chr10 26579946 26580051 -119009237 + AluJb SINE Alu 1 112 -200 4437 115 24 6 chr10 26580051 26580675 -119008613 - MER41B LTR ERV1 0 635 1 1793 139 0 77 chr10 26580675 26580721 -119008567 + AluJb SINE Alu 112 160 -152 2157 111 3 7 chr10 26580721 26581027 -119008261 + AluSg SINE Alu 1 305 -5 1793 139 0 77 chr10 26581027 26581212 -119008076 + AluJb SINE Alu 160 312 0 1878 164 3 3 chr10 26581338 26581649 -119007639 - AluSx SINE Alu -1 311 1 1959 144 3 7 chr10 26581796 26582095 -119007193 + AluSx SINE Alu 1 298 -14 1665 166 26 29 chr10 26582307 26582614 -119006674 - AluJo SINE Alu -6 306 1 326 224 0 0 chr10 26582933 26583000 -119006288 + MIR SINE MIR 89 155 -107 985 267 32 4 chr10 26583098 26583349 -119005939 - MIR SINE MIR -2 260 3 988 217 75 5 chr10 26584675 26584887 -119004401 - MIR SINE MIR 0 262 36 2192 122 3 0 chr10 26585154 26585458 -119003830 - AluSx SINE Alu -7 305 1 187 203 31 16 chr10 26585686 26585750 -119003538 + CT-rich Low_complexity Low_complexity 3 67 0 353 115 0 0 chr10 26585873 26585925 -119003363 + Alu SINE Alu 250 301 -1 346 356 22 0 chr10 26585975 26586110 -119003178 - MIR3 SINE MIR -41 167 30 223 286 200 9 chr10 26586929 26587034 -119002254 - MIR3 SINE MIR -40 168 44 291 319 265 15 chr10 26587200 26587404 -119001884 + MIR SINE MIR 2 256 -6 * 331 326 30 30 chr10 26587399 26587534 -119001754 + MIR3 SINE MIR 50 184 -24 22 80 0 0 chr10 26588143 26588193 -119001095 + AT_rich Low_complexity Low_complexity 1 50 0 239 366 79 10 chr10 26588733 26588834 -119000454 + MIR SINE MIR 33 116 -92 845 270 5 5 chr10 26589375 26589575 -118999713 + MIR SINE MIR 49 248 -14 561 245 41 20 chr10 26589933 26590080 -118999208 - MIR3 SINE MIR -25 183 34 22 0 0 0 chr10 26590147 26590169 -118999119 + AT_rich Low_complexity Low_complexity 1 22 0 28 0 0 0 chr10 26593037 26593065 -118996223 + GC_rich Low_complexity Low_complexity 1 28 0 574 240 0 8 chr10 26594046 26594171 -118995117 + L2 LINE L2 3190 3313 0 238 346 10 50 chr10 26594695 26594796 -118994492 + MIR SINE MIR 28 124 -84 1475 148 25 44 chr10 26595010 26595327 -118993961 - MER33 DNA MER1_type 0 324 14 186 71 0 0 chr10 26595547 26595575 -118993713 + (CA)n Simple_repeat Simple_repeat 2 29 0 693 252 78 71 chr10 26595621 26595930 -118993358 - L2 LINE L2 0 3313 3003 285 333 56 40 chr10 26596645 26596771 -118992517 + MIR SINE MIR 20 147 -61 290 234 186 10 chr10 26597153 26597257 -118992031 - MER5A DNA MER1_type -72 106 1 180 0 0 0 chr10 26597318 26597338 -118991950 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 471 278 86 6 chr10 26597416 26597578 -118991710 - MIR SINE MIR -11 251 77 892 215 32 16 chr10 26597608 26597794 -118991494 - MER5A DNA MER1_type 0 189 1 4159 119 35 30 chr10 26598802 26599439 -118989849 - MER51C LTR ERV1 0 640 1 2650 121 35 42 chr10 26599550 26599906 -118989382 + L1MA8 LINE L1 5838 6192 -99 1906 159 0 3 chr10 26599906 26600195 -118989093 + AluSx SINE Alu 9 296 -16 2650 121 35 42 chr10 26600195 26600292 -118988996 + L1MA8 LINE L1 6192 6288 -3 796 207 0 0 chr10 26600446 26600586 -118988702 - FLAM_C SINE Alu -2 141 2 402 147 0 0 chr10 26600913 26600981 -118988307 + (TCC)n Simple_repeat Simple_repeat 3 70 0 752 233 0 0 chr10 26601628 26601761 -118987527 + FLAM_A SINE Alu 1 133 0 234 0 0 0 chr10 26602153 26602179 -118987109 + (T)n Simple_repeat Simple_repeat 1 26 0 2455 224 17 82 chr10 26602371 26603012 -118986276 + L1ME1 LINE L1 5334 6015 -151 2444 67 3 16 chr10 26603012 26603327 -118985961 + AluY SINE Alu 1 311 0 2455 224 17 82 chr10 26603327 26603343 -118985945 + L1ME1 LINE L1 6015 6030 -136 2430 97 0 0 chr10 26603343 26603652 -118985636 + AluSg SINE Alu 1 309 -1 2455 224 17 82 chr10 26603652 26603785 -118985503 + L1ME1 LINE L1 6030 6089 -77 4277 66 193 2 chr10 26603785 26604361 -118984927 + LTR12 LTR ERV1 3 688 0 2455 224 17 82 chr10 26604361 26604429 -118984859 + L1ME1 LINE L1 6089 6160 -6 2153 134 3 0 chr10 26604449 26604755 -118984533 - AluSx SINE Alu -5 307 1 249 281 0 0 chr10 26604974 26605031 -118984257 - L2 LINE L2 -1 3312 3256 627 270 169 41 chr10 26605071 26605676 -118983612 - L2 LINE L2 -48 3265 2545 3131 157 19 6 chr10 26605704 26606240 -118983048 + L1MA3 LINE L1 5762 6304 -1 1037 270 41 47 chr10 26606444 26606995 -118982293 + L1MB4 LINE L1 5279 5836 -344 22 0 0 0 chr10 26607127 26607149 -118982139 + AT_rich Low_complexity Low_complexity 1 22 0 182 174 22 0 chr10 26607224 26607270 -118982018 + GA-rich Low_complexity Low_complexity 4 50 0 195 42 0 0 chr10 26609567 26609591 -118979697 + (A)n Simple_repeat Simple_repeat 1 24 0 2174 126 0 10 chr10 26609995 26610296 -118978992 - AluSx SINE Alu -11 301 4 248 0 0 30 chr10 26610393 26610426 -118978862 + (TTTTTG)n Simple_repeat Simple_repeat 3 34 0 565 121 85 99 chr10 26610797 26610938 -118978350 + MER53 DNA DNA 1 139 -50 790 175 42 0 chr10 26610939 26611059 -118978229 + FLAM_C SINE Alu 2 126 -17 2037 109 21 14 chr10 26611154 26611439 -118977849 + AluSc SINE Alu 1 287 -22 268 261 0 0 chr10 26611446 26611511 -118977777 + MER53 DNA DNA 125 189 0 1666 197 7 14 chr10 26611617 26611911 -118977377 - AluJo SINE Alu -20 292 1 291 104 0 0 chr10 26612149 26612197 -118977091 + (TC)n Simple_repeat Simple_repeat 1 48 0 346 281 78 7 chr10 26612576 26612729 -118976559 + L1MC/D LINE L1 5620 5783 -2025 1270 297 70 30 chr10 26612758 26613053 -118976235 + L1ME LINE L1 4106 4388 -1758 2045 133 6 16 chr10 26613053 26613368 -118975920 + AluSx SINE Alu 1 312 0 1270 297 70 30 chr10 26613368 26613866 -118975422 + L1ME LINE L1 4388 4931 -1215 985 301 35 56 chr10 26613871 26614303 -118974985 + LTR16A LTR ERVL 28 450 0 955 250 117 25 chr10 26614310 26614926 -118974362 + L1ME LINE L1 4943 5630 -540 2217 176 3 16 chr10 26614926 26615296 -118973992 + MLT1A1 LTR MaLR 1 365 0 955 250 117 25 chr10 26615296 26615377 -118973911 + L1ME LINE L1 5630 5702 -468 572 224 85 76 chr10 26615395 26615443 -118973845 + L1M3 LINE L1 5614 5660 -520 2128 81 0 0 chr10 26615443 26615703 -118973585 - AluY SINE Alu -9 302 43 572 224 85 76 chr10 26615703 26615867 -118973421 + L1M3 LINE L1 5660 5828 -352 2052 135 3 14 chr10 26616059 26616355 -118972933 + AluSx SINE Alu 1 293 -19 1663 116 43 0 chr10 26616504 26616762 -118972526 + L1MA4 LINE L1 6018 6286 -14 1772 179 0 10 chr10 26616867 26617168 -118972120 + AluJo SINE Alu 1 298 -14 192 40 0 0 chr10 26617168 26617193 -118972095 + (GA)n Simple_repeat Simple_repeat 2 26 0 2202 176 53 10 chr10 26617426 26617771 -118971517 + MLT2D LTR ERVL 1 330 -84 323 22 0 22 chr10 26617771 26617816 -118971472 + (TC)n Simple_repeat Simple_repeat 1 44 0 * 342 0 0 0 chr10 26617815 26617853 -118971435 + (CA)n Simple_repeat Simple_repeat 1 38 0 2202 176 53 10 chr10 26617816 26617904 -118971384 + MLT2D LTR ERVL 330 414 0 651 206 116 0 chr10 26618511 26618657 -118970631 - MER5A DNA MER1_type -26 163 1 1772 162 7 10 chr10 26618728 26619018 -118970270 - AluJo SINE Alu -23 289 1 196 391 16 0 chr10 26619192 26619256 -118970032 - L2 LINE L2 -92 3180 3116 451 241 98 8 chr10 26619560 26619693 -118969595 - MLT1B LTR MaLR -245 145 1 2188 109 3 7 chr10 26619747 26620051 -118969237 + AluSx SINE Alu 1 303 -9 2195 162 34 29 chr10 26620110 26620658 -118968630 + MLT2A2 LTR ERVL 3 554 0 799 198 12 6 chr10 26620686 26620848 -118968440 + MER3 DNA MER1_type 7 122 -87 2333 98 16 0 chr10 26621303 26621610 -118967678 + AluSx SINE Alu 1 312 0 234 324 36 54 chr10 26621725 26621836 -118967452 + MIR SINE MIR 13 121 -87 3164 128 20 0 chr10 26621840 26622380 -118966908 + L1MA5A LINE L1 5669 6292 -5 205 89 44 22 chr10 26622489 26622534 -118966754 + CT-rich Low_complexity Low_complexity 2 47 0 813 188 0 40 chr10 26622537 26622686 -118966602 - FLAM_C SINE Alu 0 143 1 306 408 40 26 chr10 26622727 26623183 -118966105 + L2 LINE L2 2372 2833 -481 2294 99 3 0 chr10 26623374 26623668 -118965620 + AluSx SINE Alu 1 295 -17 2128 122 7 0 chr10 26623801 26624095 -118965193 - AluSx SINE Alu -16 296 1 1486 256 36 17 chr10 26624097 26624518 -118964770 + LTR47B LTR ERVL 15 443 0 260 250 0 33 chr10 26624518 26624574 -118964714 - MER94 DNA DNA -77 57 4 258 258 200 17 chr10 26625560 26625710 -118963578 + L1ME LINE L1 5475 5596 -525 1657 150 13 80 chr10 26625710 26626023 -118963265 + AluSx SINE Alu 1 292 -20 258 258 200 17 chr10 26626023 26626167 -118963121 + L1ME LINE L1 5596 5823 -298 23 33 0 0 chr10 26626193 26626223 -118963065 + AT_rich Low_complexity Low_complexity 1 30 0 1766 144 17 34 chr10 26626290 26626588 -118962700 + AluJo SINE Alu 3 295 -17 608 101 72 15 chr10 26626622 26626630 -118962658 + (TA)n Simple_repeat Simple_repeat 1 7 -300 216 0 0 0 chr10 26626630 26626654 -118962634 + (TG)n Simple_repeat Simple_repeat 2 25 0 608 101 72 15 chr10 26626654 26626913 -118962375 + (TA)n Simple_repeat Simple_repeat 7 307 0 567 255 15 152 chr10 26627005 26627082 -118962206 + L2 LINE L2 2927 3013 -259 2973 94 3 0 chr10 26627082 26627445 -118961843 - THE1B LTR MaLR 0 364 1 567 255 15 152 chr10 26627445 26627763 -118961525 + L2 LINE L2 3013 3268 -4 582 227 170 35 chr10 26627978 26628207 -118961081 + MIR SINE MIR 3 262 0 496 122 178 0 chr10 26628325 26628415 -118960873 + MLT2B1 LTR ERVL 1 106 -409 1223 184 14 78 chr10 26628421 26628513 -118960775 + AluJb SINE Alu 26 122 -190 5560 36 12 8 chr10 26628513 26629151 -118960137 + L1PA5 LINE L1 5514 6154 0 237 65 0 0 chr10 26629151 26629182 -118960106 + (TA)n Simple_repeat Simple_repeat 2 32 0 1223 184 14 78 chr10 26629182 26629381 -118959907 + AluJb SINE Alu 120 299 -13 1275 238 55 28 chr10 26629381 26629742 -118959546 + MLT2B1 LTR ERVL 110 480 -40 319 269 13 0 chr10 26629742 26629767 -118959521 + L1MC4 LINE L1 6620 6696 -1344 459 0 0 0 chr10 26629767 26629818 -118959470 + (TA)n Simple_repeat Simple_repeat 1 51 0 528 149 0 23 chr10 26629918 26630005 -118959283 + AluJ/FRAM SINE Alu 214 298 -14 463 303 147 53 chr10 26631034 26631470 -118957818 - L2 LINE L2 -2 3311 2835 4452 166 24 21 chr10 26631519 26632677 -118956611 + L1MB3 LINE L1 4969 6128 -55 726 187 0 8 chr10 26632677 26632800 -118956488 + FLAM_A SINE Alu 1 122 -11 4452 166 24 21 chr10 26632800 26632855 -118956433 + L1MB3 LINE L1 6128 6181 -2 472 301 104 66 chr10 26632858 26633209 -118956079 - L2 LINE L2 -556 2758 2391 2130 114 3 10 chr10 26633209 26633515 -118955773 + AluSg SINE Alu 6 309 -1 472 301 104 66 chr10 26633515 26633529 -118955759 - L2 LINE L2 -923 2391 2379 345 276 103 94 chr10 26633525 26633594 -118955694 + L2 LINE L2 2912 2979 -334 * 1927 138 7 3 chr10 26633594 26633883 -118955405 - AluSx SINE Alu -22 290 1 345 276 103 94 chr10 26633883 26634154 -118955134 + L2 LINE L2 2979 3255 -58 1441 168 45 16 chr10 26634313 26634622 -118954666 - L1MA7 LINE L1 -10 6281 5964 202 282 199 46 chr10 26634654 26634785 -118954503 - L2 LINE L2 -1975 1339 1189 * 306 171 207 0 chr10 26634761 26634843 -118954445 - L2 LINE L2 -4 3268 3170 2485 74 0 3 chr10 26635384 26635694 -118953594 + AluY SINE Alu 1 309 -2 248 237 97 44 chr10 26636950 26637064 -118952224 + MIR SINE MIR 23 142 -66 908 297 34 31 chr10 26637178 26637595 -118951693 - LTR16A LTR ERVL -8 442 25 1887 154 94 30 chr10 26639257 26639659 -118949629 - MSTB1 LTR MaLR -4 428 1 1301 109 24 148 chr10 26639798 26639920 -118949368 + L1MA5A LINE L1 6004 6139 -158 2163 118 3 0 chr10 26639920 26640207 -118949081 + AluSx SINE Alu 1 288 -24 1301 109 24 148 chr10 26640207 26640415 -118948873 + L1MA5A LINE L1 6139 6293 -4 2105 148 0 0 chr10 26640418 26640716 -118948572 + AluSx SINE Alu 1 298 -14 402 311 48 6 chr10 26640817 26640984 -118948304 - MIR SINE MIR 0 262 89 565 244 58 6 chr10 26641247 26641403 -118947885 + FRAM SINE Alu 1 164 -2 1889 130 53 0 chr10 26642624 26642800 -118946488 - AluJo SINE Alu -3 309 111 282 56 0 0 chr10 26642800 26642836 -118946452 + (TTTA)n Simple_repeat Simple_repeat 4 39 0 1889 130 53 0 chr10 26642836 26642943 -118946345 - AluJo SINE Alu -201 111 11 814 199 0 7 chr10 26643114 26643254 -118946034 - L1PB4 LINE L1 -14 6142 6002 3892 97 32 0 chr10 26643254 26643791 -118945497 - MER41A LTR ERV1 0 554 1 12265 92 24 8 chr10 26643801 26645283 -118944005 - MER41A-int LTR ERV1 -12 5934 3610 2122 138 3 0 chr10 26645283 26645580 -118943708 + AluSx SINE Alu 1 298 -14 12265 92 24 8 chr10 26645580 26646095 -118943193 - MER41A-int LTR ERV1 -2336 3610 3105 3342 145 55 10 chr10 26646112 26646727 -118942561 - L1PB4 LINE L1 -153 6003 5361 584 274 52 52 chr10 26647266 26647518 -118941770 - MIR SINE MIR 0 262 11 447 125 0 0 chr10 26648217 26648289 -118940999 + (CA)n Simple_repeat Simple_repeat 2 73 0 724 265 58 29 chr10 26648298 26648645 -118940643 + L1ME4a LINE L1 5603 5959 -162 859 208 0 0 chr10 26648858 26649007 -118940281 + AluJo SINE Alu 126 274 -38 305 162 29 0 chr10 26649316 26649384 -118939904 + L1MA4 LINE L1 6224 6293 -7 32 0 0 0 chr10 26649386 26649418 -118939870 + AT_rich Low_complexity Low_complexity 1 32 0 201 194 0 56 chr10 26649981 26650053 -118939235 + T-rich Low_complexity Low_complexity 2 69 0 2045 125 0 0 chr10 26650062 26650350 -118938938 + AluSx SINE Alu 1 288 -24 564 203 42 28 chr10 26651689 26651832 -118937456 + FRAM SINE Alu 31 175 -1 426 127 0 0 chr10 26652149 26652220 -118937068 + (GGGA)n Simple_repeat Simple_repeat 4 74 0 393 203 80 0 chr10 26652646 26652784 -118936504 - MER3 DNA MER1_type 0 2585 2437 383 104 149 0 chr10 26652789 26652856 -118936432 - MER3 DNA MER1_type -92 117 41 4076 113 17 1 chr10 26653564 26654683 -118934605 + L1PA13 LINE L1 4716 5853 -310 2008 95 7 7 chr10 26654784 26655078 -118934210 + L1PA13 LINE L1 5856 6149 -14 1894 143 0 0 chr10 26655254 26655519 -118933769 + AluSx SINE Alu 1 265 -47 249 109 0 0 chr10 26655556 26655602 -118933686 + (TTAA)n Simple_repeat Simple_repeat 3 48 0 3088 247 78 31 chr10 26656127 26657865 -118931423 + L1MEc LINE L1 73 2056 -4340 1971 236 56 5 chr10 26658058 26658913 -118930375 + L1MEc LINE L1 2319 3338 -2877 1549 153 0 8 chr10 26659767 26660016 -118929272 - AluJo SINE Alu -15 297 51 280 268 78 13 chr10 26662357 26662510 -118926778 - MLT1J1 LTR MaLR -5 441 279 445 271 66 13 chr10 26662612 26662763 -118926525 - MLT1J2 LTR MaLR -21 429 271 336 325 124 62 chr10 26663525 26663848 -118925440 + L2 LINE L2 2925 3267 -5 384 343 99 21 chr10 26663998 26664240 -118925048 + MIR SINE MIR 2 262 0 2052 116 3 14 chr10 26664832 26665145 -118924143 + AluSx SINE Alu 1 310 0 717 308 166 56 chr10 26665226 26666345 -118922943 - L2 LINE L2 -2 3270 2037 478 113 47 0 chr10 26667150 26667256 -118922032 + GA-rich Low_complexity Low_complexity 2 112 0 240 236 56 0 chr10 26667878 26667950 -118921338 + (CATATA)n Simple_repeat Simple_repeat 3 78 0 466 270 69 16 chr10 26667994 26668183 -118921105 - L1MC4a LINE L1 -1922 5886 5688 2378 98 0 13 chr10 26668871 26669188 -118920100 + AluSq SINE Alu 1 313 0 1946 131 51 51 chr10 26669846 26670221 -118919067 - THE1C LTR MaLR 0 375 1 22 35 0 0 chr10 26670912 26670941 -118918347 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr10 26671450 26671478 -118917810 + AT_rich Low_complexity Low_complexity 1 28 0 578 244 103 62 chr10 26671589 26671631 -118917657 - HsTC2 DNA Tc2 2 1900 1861 2102 98 0 0 chr10 26671631 26671905 -118917383 + AluSx SINE Alu 21 294 -18 578 244 103 62 chr10 26671905 26672097 -118917191 - HsTC2 DNA Tc2 -37 1861 1678 2969 173 66 41 chr10 26672097 26672812 -118916476 + MER44D DNA MER2_type 1 605 0 578 244 103 62 chr10 26672812 26673011 -118916277 - HsTC2 DNA Tc2 -220 1678 1272 * 742 223 101 92 chr10 26673003 26673140 -118916148 - HsTC2 DNA Tc2 -1526 372 238 2333 100 0 0 chr10 26673140 26673439 -118915849 - AluSx SINE Alu -13 299 1 742 223 101 92 chr10 26673439 26673460 -118915828 - HsTC2 DNA Tc2 -1660 238 219 2335 95 0 3 chr10 26673460 26673756 -118915532 - AluSx SINE Alu -17 295 1 742 223 101 92 chr10 26673756 26673964 -118915324 - HsTC2 DNA Tc2 -1679 219 2 897 199 0 36 chr10 26674260 26674426 -118914862 + AluJo SINE Alu 1 160 -152 850 308 113 9 chr10 26675244 26675700 -118913588 - L2 LINE L2 -63 3250 2745 601 278 139 21 chr10 26677008 26677289 -118911999 + L2 LINE L2 2995 3308 -5 180 270 0 0 chr10 26678044 26678081 -118911207 - L2 LINE L2 -18 3254 3218 1156 216 28 28 chr10 26678822 26679076 -118910212 + AluJo SINE Alu 7 260 -52 2107 148 0 0 chr10 26679615 26679912 -118909376 - AluSx SINE Alu -15 297 1 255 244 103 13 chr10 26679927 26680005 -118909283 + L2 LINE L2 3229 3313 0 534 225 92 21 chr10 26680637 26680779 -118908509 + MIR SINE MIR 17 168 -94 639 217 23 0 chr10 26680879 26681008 -118908280 + MIR SINE MIR 131 262 0 323 370 16 8 chr10 26681331 26681458 -118907830 + L2 LINE L2 2632 2759 -555 407 383 105 20 chr10 26681521 26681913 -118907375 + L2 LINE L2 2832 3256 -16 674 267 61 51 chr10 26682822 26683165 -118906123 - MLT1I LTR MaLR -18 391 1 28 29 0 0 chr10 26683986 26684021 -118905267 + AT_rich Low_complexity Low_complexity 1 35 0 1559 262 48 32 chr10 26684083 26684769 -118904519 - LTR51 LTR ERV1 -70 738 1 1025 178 13 49 chr10 26684870 26685095 -118904193 - MER20 DNA MER1_type 0 219 3 1017 255 134 86 chr10 26685178 26685569 -118903719 - MLT1G LTR MaLR 0 590 167 2112 124 10 0 chr10 26685569 26685868 -118903420 - AluSx SINE Alu -10 302 1 1017 255 134 86 chr10 26685868 26686044 -118903244 - MLT1G LTR MaLR -423 167 1 198 0 0 0 chr10 26686389 26686411 -118902877 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 6153 137 16 1 chr10 26686414 26687963 -118901325 - L1PB1 LINE L1 -3 6148 4579 62 36 0 0 chr10 26689466 26689549 -118899739 + AT_rich Low_complexity Low_complexity 1 83 0 183 80 0 0 chr10 26689962 26689987 -118899301 + (A)n Simple_repeat Simple_repeat 1 25 0 2146 144 46 8 chr10 26690093 26690461 -118898827 + MSTB1 LTR MaLR 51 432 0 229 240 60 20 chr10 26690462 26690562 -118898726 + L1M4 LINE L1 5693 5796 -382 294 309 56 16 chr10 26690854 26690980 -118898308 - MLT1I LTR MaLR -2 407 277 240 135 54 108 chr10 26691084 26691158 -118898130 - MLT1J2 LTR MaLR -313 137 68 292 291 40 0 chr10 26691721 26691851 -118897437 - L1ME LINE L1 -708 5462 5328 368 294 56 0 chr10 26691950 26692110 -118897178 - L1ME LINE L1 -1072 5074 4906 602 271 39 6 chr10 26693464 26693645 -118895643 + MLT1J LTR MaLR 1 187 -324 21 0 0 0 chr10 26693896 26693917 -118895371 + AT_rich Low_complexity Low_complexity 1 21 0 502 256 196 0 chr10 26694195 26694363 -118894925 - MIR SINE MIR -56 206 6 270 265 129 41 chr10 26694363 26694533 -118894755 - Charlie8 DNA MER1_type -2158 259 75 26 30 0 0 chr10 26695888 26695921 -118893367 + AT_rich Low_complexity Low_complexity 1 33 0 240 385 0 10 chr10 26696057 26696153 -118893135 - MIR SINE MIR -162 100 6 2606 216 45 35 chr10 26696517 26696805 -118892483 - L1ME2 LINE L1 0 6164 5880 2457 62 0 19 chr10 26696805 26697114 -118892174 - AluY SINE Alu -8 303 1 2606 216 45 35 chr10 26697114 26697561 -118891727 - L1ME2 LINE L1 -284 5880 5422 24 32 0 0 chr10 26697689 26697720 -118891568 + AT_rich Low_complexity Low_complexity 1 31 0 349 309 34 20 chr10 26697749 26697953 -118891335 - L1ME4a LINE L1 -275 6240 6034 303 298 166 33 chr10 26697975 26698156 -118891132 - L1ME4a LINE L1 -1959 4581 4377 1502 129 99 1 chr10 26698252 26698573 -118890715 + L1MA8 LINE L1 5917 6277 -23 180 179 0 0 chr10 26699085 26699124 -118890164 + T-rich Low_complexity Low_complexity 1 39 0 560 313 51 59 chr10 26699729 26700202 -118889086 - L1MC/D LINE L1 -2007 5801 5333 293 208 150 92 chr10 26700400 26700520 -118888768 + MIR SINE MIR 104 230 -32 240 59 0 0 chr10 26700732 26700766 -118888522 + (GTTTG)n Simple_repeat Simple_repeat 1 34 0 1316 205 0 30 chr10 26700868 26701136 -118888152 - AluJb SINE Alu -52 260 1 4452 148 19 23 chr10 26701483 26702344 -118886944 - L1MA9 LINE L1 -14 6298 5345 3716 144 25 6 chr10 26702394 26703061 -118886227 - L1MA9 LINE L1 -1168 4978 4299 234 151 0 57 chr10 26703534 26703587 -118885701 + CT-rich Low_complexity Low_complexity 5 54 0 211 264 0 0 chr10 26703689 26703758 -118885530 + (TTCA)n Simple_repeat Simple_repeat 1 69 0 476 282 92 20 chr10 26703894 26704089 -118885199 - L2 LINE L2 -901 2413 2205 1749 104 3 74 chr10 26705786 26706084 -118883204 - AluSx SINE Alu -35 277 1 2318 265 39 16 chr10 26707282 26708497 -118880791 - L1MEc LINE L1 -3230 3310 2091 243 88 0 0 chr10 26708497 26708531 -118880757 + (TG)n Simple_repeat Simple_repeat 1 34 0 2318 265 39 16 chr10 26708531 26708586 -118880702 - L1MEc LINE L1 -4449 2091 2039 303 185 0 0 chr10 26708609 26708663 -118880625 - MLT2B3 LTR ERVL 0 520 467 220 194 0 0 chr10 26708663 26708699 -118880589 + polypyrimidine Low_complexity Low_complexity 2 37 0 189 0 0 0 chr10 26708722 26708743 -118880545 + (TATG)n Simple_repeat Simple_repeat 4 24 0 2095 214 85 19 chr10 26708766 26709239 -118880049 - MLT2B3 LTR ERVL -46 508 5 508 211 30 23 chr10 26709243 26709376 -118879912 - L1MEc LINE L1 -4561 1979 1846 490 239 181 32 chr10 26709561 26709749 -118879539 - MIR SINE MIR 0 262 47 342 340 77 13 chr10 26709815 26709971 -118879317 - MIR3 SINE MIR -34 174 9 266 353 42 8 chr10 26710500 26710619 -118878669 + MIR SINE MIR 16 138 -70 351 274 12 0 chr10 26710639 26710723 -118878565 - L2 LINE L2 0 3272 3188 2148 80 42 0 chr10 26710932 26711220 -118878068 - AluY SINE Alu -11 300 1 31 76 0 0 chr10 26712404 26712470 -118876818 + AT_rich Low_complexity Low_complexity 1 66 0 2147 117 3 3 chr10 26715249 26715547 -118873741 - AluSg SINE Alu -12 298 1 21 57 0 0 chr10 26715847 26715882 -118873406 + AT_rich Low_complexity Low_complexity 1 35 0 580 325 105 18 chr10 26716561 26716903 -118872385 + L2 LINE L2 2369 2740 -574 2522 53 0 0 chr10 26716917 26717216 -118872072 - AluY SINE Alu -12 299 1 327 318 162 0 chr10 26717271 26717425 -118871863 + L2 LINE L2 2881 3059 -213 1157 260 46 48 chr10 26717439 26717896 -118871392 - LTR16A1 LTR ERVL -1 456 1 216 161 65 16 chr10 26717941 26718003 -118871285 + (TCTA)n Simple_repeat Simple_repeat 2 66 0 221 0 35 0 chr10 26718003 26718032 -118871256 + (ATTG)n Simple_repeat Simple_repeat 3 32 0 973 256 14 5 chr10 26718138 26718353 -118870935 - MIR SINE MIR 0 262 46 337 359 57 13 chr10 26718670 26718829 -118870459 + MIR3 SINE MIR 32 197 -11 483 207 25 25 chr10 26719405 26719526 -118869762 + MIR SINE MIR 24 144 -118 21 0 0 0 chr10 26720230 26720251 -118869037 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr10 26720551 26720575 -118868713 + AT_rich Low_complexity Low_complexity 1 24 0 2458 209 38 12 chr10 26720636 26721214 -118868074 - L1MA9 LINE L1 -39 6273 5681 1058 178 0 0 chr10 26721324 26721498 -118867790 - AluSx SINE Alu -4 308 135 445 123 0 0 chr10 26721498 26721563 -118867725 - AluSx SINE Alu -248 65 1 1933 169 43 62 chr10 26721564 26722079 -118867209 - MLT1D LTR MaLR 0 505 1 234 302 0 0 chr10 26722301 26722364 -118866924 + GA-rich Low_complexity Low_complexity 2 64 0 208 299 0 52 chr10 26722754 26722831 -118866457 + MIR3 SINE MIR 120 192 -16 207 341 110 0 chr10 26722846 26722928 -118866360 - MER5B DNA MER1_type -5 173 83 1214 234 54 28 chr10 26723247 26723564 -118865724 - L1ME2 LINE L1 -10 6154 5826 2352 71 0 34 chr10 26723564 26723886 -118865402 - AluY SINE Alu 0 311 1 1214 234 54 28 chr10 26723886 26723922 -118865366 - L1ME2 LINE L1 -338 5826 5792 686 211 83 39 chr10 26724058 26724238 -118865050 - MER58C DNA MER1_type 0 215 28 463 161 92 0 chr10 26724254 26724341 -118864947 + MER3 DNA MER1_type 1 95 -114 336 361 147 12 chr10 26724341 26724593 -118864695 + L3 LINE CR1 252 537 -1040 960 177 59 30 chr10 26724658 26724861 -118864427 - MER3 DNA MER1_type 0 209 1 545 277 6 60 chr10 26724861 26725027 -118864261 + L3 LINE CR1 584 740 -837 354 234 0 32 chr10 26725164 26725258 -118864030 - MER103 DNA DNA -45 121 31 391 318 28 28 chr10 26725263 26725439 -118863849 + L3 LINE CR1 780 955 -622 215 143 61 0 chr10 26725604 26725653 -118863635 + (TTTG)n Simple_repeat Simple_repeat 2 53 0 629 294 70 0 chr10 26725892 26726079 -118863209 + MIR SINE MIR 5 204 -58 254 214 129 14 chr10 26726170 26726240 -118863048 - MIR SINE MIR -112 150 73 328 311 68 40 chr10 26726806 26726954 -118862334 - L2 LINE L2 -5 3267 3116 229 289 0 0 chr10 26728041 26728093 -118861195 + (CATA)n Simple_repeat Simple_repeat 2 53 0 243 88 0 0 chr10 26728482 26728516 -118860772 + (CA)n Simple_repeat Simple_repeat 1 34 0 299 85 21 0 chr10 26728516 26728563 -118860725 + (GA)n Simple_repeat Simple_repeat 1 48 0 1742 164 31 0 chr10 26728873 26729160 -118860128 - AluJo SINE Alu -13 299 4 1102 258 87 49 chr10 26729173 26729648 -118859640 - L1MC4a LINE L1 -1929 5879 5379 1905 73 55 0 chr10 26729648 26729920 -118859368 - L1PA10 LINE L1 -11 6157 5871 1102 258 87 49 chr10 26729920 26729999 -118859289 - L1MC4a LINE L1 -2429 5379 5304 4539 195 37 18 chr10 26730023 26731081 -118858207 - L1MB3 LINE L1 0 6183 5073 2493 116 6 6 chr10 26731081 26731443 -118857845 + THE1B LTR MaLR 1 362 -2 4539 195 37 18 chr10 26731443 26732080 -118857208 - L1MB3 LINE L1 -1110 5073 4450 500 288 98 80 chr10 26732086 26733126 -118856162 - L1MC4a LINE L1 -855 5291 4270 4774 216 52 25 chr10 26733126 26734541 -118854747 - Charlie1a DNA MER1_type 0 1455 3 500 288 98 80 chr10 26734541 26734722 -118854566 - L1MC4a LINE L1 -1876 4270 4094 1466 29 0 0 chr10 26734722 26734895 -118854393 + L1PA4 LINE L1 5977 6149 -6 500 288 98 80 chr10 26734895 26735584 -118853704 - L1MC4a LINE L1 -2052 4094 3332 2216 90 0 0 chr10 26735584 26735886 -118853402 - AluSc SINE Alu 0 304 3 500 288 98 80 chr10 26735886 26736228 -118853060 - L1MC4a LINE L1 -2814 3332 2997 21 36 0 0 chr10 26736248 26736276 -118853012 + AT_rich Low_complexity Low_complexity 1 28 0 235 155 0 35 chr10 26736318 26736376 -118852912 + (TA)n Simple_repeat Simple_repeat 2 57 0 258 32 0 0 chr10 26736389 26736420 -118852868 + (CA)n Simple_repeat Simple_repeat 2 32 0 279 285 113 40 chr10 26736448 26736928 -118852360 - L1MC4a LINE L1 -3321 2825 2311 991 295 8 11 chr10 26737389 26737759 -118851529 - HAL1b LINE L1 -735 613 245 1804 240 86 31 chr10 26737761 26738310 -118850978 - MER119 DNA MER1_type 0 583 5 384 209 0 0 chr10 26738348 26738439 -118850849 + (TATG)n Simple_repeat Simple_repeat 3 93 0 2113 108 14 14 chr10 26738541 26738837 -118850451 - AluSx SINE Alu -16 296 1 1959 119 22 0 chr10 26739204 26739512 -118849776 - AluSx SINE Alu 0 314 1 198 324 14 14 chr10 26740240 26740314 -118848974 + L2 LINE L2 2694 2767 -547 305 330 74 80 chr10 26740595 26740946 -118848342 + L2 LINE L2 2915 3263 -9 411 301 18 9 chr10 26742540 26742653 -118846635 + MIR3 SINE MIR 54 167 -41 267 31 0 0 chr10 26743135 26743167 -118846121 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 2504 59 3 0 chr10 26743589 26743896 -118845392 + AluY SINE Alu 1 308 -3 10321 120 16 28 chr10 26743996 26744331 -118844957 - Tigger1 DNA MER2_type -788 1630 1293 2318 80 3 0 chr10 26744331 26744633 -118844655 - AluY SINE Alu -8 303 1 10321 120 16 28 chr10 26744633 26745017 -118844271 - Tigger1 DNA MER2_type -1125 1293 906 1390 194 45 21 chr10 26745017 26745306 -118843982 - AluJo SINE Alu -16 296 1 10321 120 16 28 chr10 26745306 26746233 -118843055 - Tigger1 DNA MER2_type -1512 906 2 1872 164 0 34 chr10 26746309 26746632 -118842656 - AluJo SINE Alu 0 312 1 3449 118 13 85 chr10 26746778 26746957 -118842331 - L1MA6 LINE L1 -388 5912 5722 198 0 0 0 chr10 26746957 26746979 -118842309 + (CA)n Simple_repeat Simple_repeat 2 23 0 3449 118 13 85 chr10 26746979 26747431 -118841857 - L1MA6 LINE L1 -578 5722 5343 2636 104 46 22 chr10 26747431 26747846 -118841442 - L1PA11 LINE L1 0 6174 5750 3449 118 13 85 chr10 26747846 26748012 -118841276 - L1MA6 LINE L1 -957 5343 5167 1759 177 54 3 chr10 26748009 26748342 -118840946 + L1MA7 LINE L1 5909 6258 -33 * 395 208 52 0 chr10 26748342 26748419 -118840869 + Tigger5 DNA MER2_type 1 81 -2242 298 270 79 22 chr10 26748419 26748508 -118840780 - Tigger5 DNA MER2_type -6 2317 2224 * 394 268 0 0 chr10 26748487 26748569 -118840719 + Tigger5 DNA MER2_type 2242 2323 0 275 167 0 0 chr10 26748569 26748617 -118840671 + L1MA9 LINE L1 6265 6312 0 291 85 0 0 chr10 26748734 26748781 -118840507 + (CA)n Simple_repeat Simple_repeat 2 48 0 25 0 0 0 chr10 26749348 26749373 -118839915 + AT_rich Low_complexity Low_complexity 1 25 0 2177 123 0 0 chr10 26750134 26750436 -118838852 + AluSq SINE Alu 1 302 -11 2435 50 0 13 chr10 26750639 26750940 -118838348 + AluY SINE Alu 1 297 -14 987 73 46 20 chr10 26751499 26751650 -118837638 - L1PA2 LINE L1 0 6155 6001 1454 178 22 38 chr10 26752409 26752724 -118836564 - AluJo SINE Alu 0 312 3 274 234 218 0 chr10 26753303 26753427 -118835861 + L1MC5 LINE L1 7757 7907 -54 254 222 222 32 chr10 26753588 26753714 -118835574 - MER5B DNA MER1_type -28 150 1 251 287 35 11 chr10 26753902 26753989 -118835299 - MIR3 SINE MIR -7 201 113 204 297 0 68 chr10 26754015 26754089 -118835199 - L2 LINE L2 -9 3263 3195 301 226 97 73 chr10 26756140 26756264 -118833024 + MIR SINE MIR 80 206 -56 21 0 0 0 chr10 26756482 26756503 -118832785 + AT_rich Low_complexity Low_complexity 1 21 0 505 279 49 22 chr10 26757349 26757532 -118831756 + MIR SINE MIR 75 262 0 1109 279 122 28 chr10 26757882 26758416 -118830872 + MLT1L LTR MaLR 15 598 -17 2646 254 72 13 chr10 26758634 26759816 -118829472 - L1ME3A LINE L1 0 6170 4917 334 134 96 4 chr10 26759872 26760111 -118829177 + (TA)n Simple_repeat Simple_repeat 1 260 0 842 230 70 33 chr10 26760179 26760479 -118828809 - L1ME3A LINE L1 -1424 4722 4412 430 202 50 0 chr10 26760495 26760594 -118828694 - FLAM_A SINE Alu -2 140 37 10649 193 44 18 chr10 26760729 26763394 -118825894 - L1PBa LINE L1 -1510 5352 2607 793 288 77 9 chr10 26763496 26763965 -118825323 - L1M LINE L1 -743 5403 4917 325 126 96 18 chr10 26764020 26764290 -118824998 + (TA)n Simple_repeat Simple_repeat 1 291 0 2087 230 94 62 chr10 26764357 26764678 -118824610 - L1M4 LINE L1 -1424 4722 4413 1420 146 146 22 chr10 26764678 26764946 -118824342 - AluJo SINE Alu 0 302 2 2087 230 94 62 chr10 26764946 26765566 -118823722 - L1M4 LINE L1 -1733 4413 3750 249 198 17 112 chr10 26765831 26765947 -118823341 - L1ME LINE L1 -5926 144 40 697 316 90 32 chr10 26766123 26766956 -118822332 + L1MEc LINE L1 940 1820 -4576 210 37 0 0 chr10 26767496 26767523 -118821765 + (CAAAAA)n Simple_repeat Simple_repeat 2 28 0 327 213 66 16 chr10 26768154 26768276 -118821012 - L1ME4a LINE L1 -16 6105 5978 364 348 79 17 chr10 26769243 26769421 -118819867 - MER5A DNA MER1_type 0 189 1 1237 103 82 30 chr10 26769933 26770166 -118819122 - L1MA8 LINE L1 -4 6287 6043 1998 169 35 3 chr10 26770423 26770766 -118818522 - MLT1A1 LTR MaLR -11 354 1 25 0 0 0 chr10 26772112 26772137 -118817151 + AT_rich Low_complexity Low_complexity 1 25 0 585 318 23 18 chr10 26772522 26772739 -118816549 + MIR SINE MIR 8 225 -37 1605 237 53 12 chr10 26772750 26773167 -118816121 - MLT1D LTR MaLR -66 439 6 360 0 0 0 chr10 26774057 26774097 -118815191 + (CA)n Simple_repeat Simple_repeat 2 41 0 2478 175 55 17 chr10 26774656 26775053 -118814235 - MLT1D LTR MaLR -8 497 78 1789 158 158 13 chr10 26775053 26775427 -118813861 + MSTA LTR MaLR 1 428 0 2478 175 55 17 chr10 26775427 26775504 -118813784 - MLT1D LTR MaLR -427 78 5 24 53 0 0 chr10 26775910 26775948 -118813340 + AT_rich Low_complexity Low_complexity 1 38 0 183 80 0 0 chr10 26777360 26777385 -118811903 + (T)n Simple_repeat Simple_repeat 1 25 0 1801 92 4 0 chr10 26777391 26777652 -118811636 - L1PA11 LINE L1 0 6174 5913 532 15 0 0 chr10 26779087 26779152 -118810136 + L1PA3 LINE L1 6091 6155 0 1077 195 90 67 chr10 26779347 26779737 -118809551 - L1 LINE L1 -3826 2502 2098 1991 135 3 3 chr10 26779737 26780033 -118809255 + AluSq SINE Alu 3 298 -15 1077 195 90 67 chr10 26780033 26780168 -118809120 - L1 LINE L1 -4230 2098 1968 1895 172 47 7 chr10 26780279 26781907 -118807381 - L1 LINE L1 -4083 1245 3 2079 148 19 23 chr10 26781955 26782318 -118806970 + THE1B LTR MaLR 1 426 -2 11262 106 6 1 chr10 26782320 26783893 -118805395 + THE1B-int LTR MaLR 1 1580 0 2310 115 19 22 chr10 26783893 26784258 -118805030 + THE1B LTR MaLR 1 364 0 1276 238 36 30 chr10 26784258 26784725 -118804563 - L1M4 LINE L1 -3270 2876 2407 4650 200 33 26 chr10 26784748 26784796 -118804492 - L1MB2 LINE L1 -9 6162 6116 6695 81 12 11 chr10 26784796 26786514 -118802774 - L1PA7 LINE L1 -14 6140 4425 4650 200 33 26 chr10 26786514 26788352 -118800936 - L1MB2 LINE L1 -55 6116 4261 411 243 145 25 chr10 26788343 26788578 -118800710 - L1M4 LINE L1 -3717 2429 2167 * 256 233 0 41 chr10 26788632 26788705 -118800583 - L3 LINE CR1 -557 1020 951 721 212 31 62 chr10 26788915 26788951 -118800337 + MIR SINE MIR 65 101 -161 2917 142 27 8 chr10 26788951 26789429 -118799859 - LTR45B LTR ERV1 0 489 3 721 212 31 62 chr10 26789429 26789585 -118799703 + MIR SINE MIR 101 251 -11 560 333 42 17 chr10 26789526 26789763 -118799525 - MIR SINE MIR -6 256 14 * 281 312 178 32 chr10 26789759 26790102 -118799186 - L3 LINE CR1 -878 699 307 * 24 0 0 0 chr10 26790578 26790602 -118798686 + AT_rich Low_complexity Low_complexity 1 24 0 1061 272 137 41 chr10 26791298 26791953 -118797335 - L1ME3A LINE L1 -42 6128 5537 1857 139 11 41 chr10 26791953 26792321 -118796967 - L1MA8 LINE L1 -4 6287 5931 1061 272 137 41 chr10 26792321 26793173 -118796115 - L1ME3A LINE L1 -633 5537 4468 420 309 55 14 chr10 26793179 26793396 -118795892 - L1ME3A LINE L1 -3623 2523 2298 672 292 46 29 chr10 26793565 26793805 -118795483 + LTR16C LTR ERVL 248 491 0 2200 133 37 0 chr10 26793815 26794222 -118795066 + L1PA13 LINE L1 5189 5607 -556 * 22112 30 3 0 chr10 26794220 26796902 -118792386 - L1P LINE L1 -1517 4629 1941 7503 29 7 1 chr10 26796902 26798386 -118790902 + L1PA3 LINE L1 4664 6152 -3 3024 140 29 4 chr10 26798424 26798916 -118790372 + L1PA13 LINE L1 5593 6096 -67 1034 282 65 23 chr10 26798995 26799697 -118789591 - L1MEc LINE L1 -3035 3180 2449 3925 234 60 30 chr10 26799775 26801097 -118788191 - L1MD2 LINE L1 -18 6410 5012 183 42 0 0 chr10 26801097 26801121 -118788167 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 3925 234 60 30 chr10 26801121 26801772 -118787516 - L1MD2 LINE L1 -1416 5012 4382 657 291 31 88 chr10 26802082 26802696 -118786592 - L1MD2 LINE L1 -4586 1810 1232 3869 161 37 1 chr10 26802886 26803615 -118785673 - L1MB7 LINE L1 0 6184 5430 453 211 109 51 chr10 26803669 26803844 -118785444 - L1ME3A LINE L1 -76 6094 5910 502 259 118 84 chr10 26804006 26804307 -118784981 - L1MEc LINE L1 -4169 2227 1903 1683 195 13 10 chr10 26804307 26804614 -118784674 - AluJo SINE Alu -4 308 1 502 259 118 84 chr10 26804614 26804786 -118784502 - L1MEc LINE L1 -4493 1903 1738 413 224 12 0 chr10 26805610 26805695 -118783593 - L2 LINE L2 -1 3312 3227 413 264 88 50 chr10 26805873 26806055 -118783233 - L1ME3A LINE L1 -221 5949 5761 226 333 12 0 chr10 26806070 26806154 -118783134 - L1ME3A LINE L1 -516 5648 5564 308 396 55 0 chr10 26806249 26806431 -118782857 - L2 LINE L2 -616 2698 2507 840 296 137 48 chr10 26806544 26807231 -118782057 - L2 LINE L2 -1159 2155 1408 2095 118 0 16 chr10 26808343 26808658 -118780630 - AluSg SINE Alu 0 310 1 740 219 168 0 chr10 26809393 26809589 -118779699 + MIR SINE MIR 31 259 -3 7229 197 34 28 chr10 26810483 26813035 -118776253 - L1MB2 LINE L1 -4 6167 3612 2312 92 0 3 chr10 26813035 26813328 -118775960 - AluSc SINE Alu -15 294 3 7229 197 34 28 chr10 26813328 26813552 -118775736 - L1MB2 LINE L1 -2559 3612 3391 7039 183 91 45 chr10 26814167 26815367 -118773921 + MER52A LTR ERV1 50 1194 -561 2241 152 25 0 chr10 26815367 26815722 -118773566 + THE1B LTR MaLR 1 364 0 10565 112 8 31 chr10 26815722 26817339 -118771949 + THE1B-int LTR MaLR 1 1580 0 2500 129 3 0 chr10 26817339 26817702 -118771586 + THE1B LTR MaLR 1 364 0 7039 183 91 45 chr10 26817702 26818036 -118771252 + MER52A LTR ERV1 1193 1755 0 22 35 0 0 chr10 26818043 26818072 -118771216 + AT_rich Low_complexity Low_complexity 1 29 0 255 314 49 10 chr10 26819028 26819130 -118770158 + L2 LINE L2 2052 2157 -1157 374 219 0 0 chr10 26819130 26819203 -118770085 - 7SK RNA RNA 0 193 121 709 198 0 16 chr10 26819239 26819365 -118769923 - 7SK RNA RNA -68 125 2 1272 261 41 26 chr10 26819367 26819758 -118769530 + L2 LINE L2 2143 2539 -775 295 359 35 28 chr10 26819774 26819916 -118769372 - MIR SINE MIR -113 149 7 27 0 0 0 chr10 26820385 26820412 -118768876 + AT_rich Low_complexity Low_complexity 1 27 0 203 203 0 51 chr10 26820860 26820919 -118768369 + T-rich Low_complexity Low_complexity 3 58 0 270 81 0 0 chr10 26821014 26821051 -118768237 + (CCTA)n Simple_repeat Simple_repeat 2 38 0 584 286 0 0 chr10 26821890 26822037 -118767251 - MLT1E LTR MaLR -9 645 499 770 164 0 0 chr10 26822038 26822154 -118767134 + FLAM_C SINE Alu 1 116 -17 905 275 57 45 chr10 26822329 26822727 -118766561 - MLT1E LTR MaLR -146 447 45 237 135 0 0 chr10 26823236 26823273 -118766015 + MLT1E3 LTR MaLR 1 37 -587 1473 235 27 46 chr10 26823367 26823813 -118765475 + MLT1E3 LTR MaLR 130 624 0 2231 136 3 45 chr10 26824414 26824505 -118764783 + MER1B DNA MER1_type 1 94 -2618 1881 163 70 14 chr10 26824505 26824860 -118764428 - THE1C LTR MaLR 0 375 1 2231 136 3 45 chr10 26824860 26825122 -118764166 + MER1B DNA MER1_type 94 339 0 242 236 55 0 chr10 26825504 26825559 -118763729 + L2 LINE L2 3256 3313 0 2938 221 31 36 chr10 26827469 26828268 -118761020 + L1MC4 LINE L1 7239 8033 -9 32 0 0 0 chr10 26828429 26828461 -118760827 + AT_rich Low_complexity Low_complexity 1 32 0 263 288 12 0 chr10 26828614 26828694 -118760594 - L1ME LINE L1 -280 5841 5761 21 36 0 0 chr10 26830788 26830816 -118758472 + AT_rich Low_complexity Low_complexity 1 28 0 273 57 0 0 chr10 26831017 26831052 -118758236 + (T)n Simple_repeat Simple_repeat 1 35 0 585 287 61 81 chr10 26831677 26831985 -118757303 + LTR16C LTR ERVL 97 397 -94 3543 120 43 26 chr10 26831985 26832608 -118756680 - LTR24C LTR ERV1 -1 634 1 585 287 61 81 chr10 26832608 26832693 -118756595 + LTR16C LTR ERVL 397 482 -9 1582 308 70 0 chr10 26832894 26833439 -118755849 + L2 LINE L2 2155 2737 -577 195 42 0 0 chr10 26833439 26833463 -118755825 + (CCCTAA)n Simple_repeat Simple_repeat 5 28 0 198 365 107 6 chr10 26835173 26835332 -118753956 + L2 LINE L2 1535 1709 -1605 2076 125 0 0 chr10 26835861 26836163 -118753125 + AluSg SINE Alu 3 304 0 268 284 0 45 chr10 26836165 26836253 -118753035 - MIR3 SINE MIR -46 162 79 2540 62 3 0 chr10 26837177 26837486 -118751802 + AluY SINE Alu 1 310 -1 1640 158 3 53 chr10 26838556 26838859 -118750429 + AluJo SINE Alu 3 290 -22 478 295 8 0 chr10 26840384 26840513 -118748775 + MIR SINE MIR 14 143 -119 1800 190 58 15 chr10 26840519 26841221 -118748067 + L1MB7 LINE L1 4968 5704 -480 1691 166 36 15 chr10 26841222 26841553 -118747735 + L1MB7 LINE L1 5845 6182 -2 193 328 0 0 chr10 26841562 26841629 -118747659 + MIR SINE MIR 146 212 -50 273 243 57 0 chr10 26842225 26842295 -118746993 - MIR SINE MIR -57 151 78 27 62 0 0 chr10 26844069 26844117 -118745171 + AT_rich Low_complexity Low_complexity 1 48 0 9731 62 96 5 chr10 26844290 26845639 -118743649 - L1P LINE L1 -4674 1472 1 3417 182 45 8 chr10 26845971 26846538 -118742750 - L1MB4 LINE L1 -109 6071 5470 230 0 33 0 chr10 26846538 26846568 -118742720 + (TTG)n Simple_repeat Simple_repeat 2 32 0 3417 182 45 8 chr10 26846568 26846726 -118742562 - L1MB4 LINE L1 -710 5470 5319 760 161 8 0 chr10 26846735 26846865 -118742423 - L1MC1 LINE L1 -195 6138 6008 * 3746 211 19 31 chr10 26846862 26847048 -118742240 - L1MB4 LINE L1 -814 5332 5145 1605 192 3 14 chr10 26847048 26847335 -118741953 - AluJo SINE Alu -28 284 1 3746 211 19 31 chr10 26847335 26848083 -118741205 - L1MB4 LINE L1 -1001 5145 4409 1613 128 57 60 chr10 26849147 26849429 -118739859 + MER1B DNA MER1_type 59 339 0 2368 99 14 3 chr10 26849604 26849948 -118739340 - L1PB1 LINE L1 -15 6136 5789 202 182 0 0 chr10 26849948 26849981 -118739307 + (TG)n Simple_repeat Simple_repeat 1 33 0 269 168 0 84 chr10 26849981 26850076 -118739212 + L1MC4 LINE L1 6617 6703 -1339 3146 106 18 4 chr10 26850086 26850279 -118739009 - L1PB1 LINE L1 -369 5782 5593 8524 46 11 5 chr10 26850279 26852132 -118737156 - L1PA6 LINE L1 -8 6146 4281 3146 106 18 4 chr10 26852132 26852393 -118736895 - L1PB1 LINE L1 -558 5593 5322 755 245 39 0 chr10 26852400 26852604 -118736684 + L1PB1 LINE L1 5104 5315 -831 242 285 16 114 chr10 26852909 26853032 -118736256 + MIR SINE MIR 35 145 -117 4668 151 30 0 chr10 26853032 26853793 -118735495 - Tigger1 DNA MER2_type -1631 787 4 24 0 0 0 chr10 26855632 26855656 -118733632 + AT_rich Low_complexity Low_complexity 1 24 0 14175 23 12 0 chr10 26856471 26858896 -118730392 + L1PA3 LINE L1 3717 6152 -3 284 307 122 34 chr10 26859182 26859420 -118729868 + L1MC/D LINE L1 5491 5749 -2059 293 339 38 60 chr10 26859651 26859834 -118729454 - L2 LINE L2 0 3313 3135 386 316 98 35 chr10 26859912 26860086 -118729202 - MIR SINE MIR -77 185 1 427 107 27 0 chr10 26860414 26860489 -118728799 + (TG)n Simple_repeat Simple_repeat 1 77 0 667 175 0 36 chr10 26860570 26860735 -118728553 - FLAM_C SINE Alu 0 161 2 2208 75 3 11 chr10 26860780 26861086 -118728202 + AluY SINE Alu 1 304 0 422 275 118 34 chr10 26861586 26861764 -118727524 + MIR SINE MIR 1 193 -69 798 326 73 78 chr10 26862017 26862997 -118726291 - L2 LINE L2 -2 3311 2346 984 188 0 0 chr10 26863008 26863189 -118726099 + MER53 DNA DNA 9 189 0 589 336 97 17 chr10 26863201 26863612 -118725676 - L2 LINE L2 -985 2329 1886 1948 154 0 0 chr10 26864135 26864428 -118724860 - AluJb SINE Alu -17 295 3 242 287 35 0 chr10 26864460 26864547 -118724741 + L1M4 LINE L1 4910 4999 -1147 341 364 90 42 chr10 26864578 26865169 -118724119 - L2 LINE L2 -1407 1907 1289 1249 198 4 0 chr10 26865777 26866009 -118723279 + MER58B DNA MER1_type 98 330 -11 2070 132 41 41 chr10 26866009 26866373 -118722915 - THE1B LTR MaLR 0 364 1 209 388 9 26 chr10 26868492 26868608 -118720680 + MER5A DNA MER1_type 76 189 0 583 303 89 88 chr10 26869368 26869995 -118719293 + L2 LINE L2 2231 2861 -453 1297 203 0 76 chr10 26869995 26870177 -118719111 - AluJo SINE Alu -20 292 143 2138 130 0 0 chr10 26870177 26870477 -118718811 + AluSx SINE Alu 1 300 -12 1297 203 0 76 chr10 26870477 26870610 -118718678 - AluJo SINE Alu -169 143 1 583 303 89 88 chr10 26870610 26870711 -118718577 + L2 LINE L2 2861 2960 -354 744 215 141 16 chr10 26870864 26871055 -118718233 - MER20 DNA MER1_type -2 217 3 296 245 21 0 chr10 26871139 26871233 -118718055 + (TG)n Simple_repeat Simple_repeat 2 97 0 219 278 119 56 chr10 26871993 26872119 -118717169 + MIR3 SINE MIR 5 138 -70 480 277 165 11 chr10 26872134 26872322 -118716966 - MIR SINE MIR -3 259 43 2077 134 23 0 chr10 26873751 26874056 -118715232 - AluSx SINE Alu 0 312 1 23 33 0 0 chr10 26874096 26874126 -118715162 + AT_rich Low_complexity Low_complexity 1 30 0 15385 121 28 5 chr10 26874286 26875291 -118713997 + Tigger1 DNA MER2_type 1 982 -1436 2267 87 3 29 chr10 26875291 26875601 -118713687 - AluY SINE Alu -9 302 1 15385 121 28 5 chr10 26875601 26876957 -118712331 + Tigger1 DNA MER2_type 982 2416 -2 405 86 0 0 chr10 26876957 26877015 -118712273 + (TGGA)n Simple_repeat Simple_repeat 1 58 0 197 349 159 20 chr10 26878051 26878246 -118711042 - MIR SINE MIR -25 237 16 748 223 26 56 chr10 26879652 26879885 -118709403 + LTR12 LTR ERV1 238 463 -251 216 0 0 0 chr10 26880347 26880371 -118708917 + (CA)n Simple_repeat Simple_repeat 2 25 0 228 244 82 44 chr10 26880376 26880478 -118708810 - MER51D LTR ERV1 0 657 547 4745 127 34 8 chr10 26880478 26881237 -118708051 - MER4E LTR ERV1 0 779 1 228 244 82 44 chr10 26881237 26881269 -118708019 - MER51D LTR ERV1 -110 547 518 2797 149 54 31 chr10 26881309 26881881 -118707407 - LTR60 LTR ERV1 0 586 2 342 323 87 0 chr10 26881899 26882026 -118707262 + MIR SINE MIR 53 190 -72 304 311 119 90 chr10 26882418 26882662 -118706626 - L2 LINE L2 -49 3223 2973 2254 281 81 19 chr10 26882665 26883140 -118706148 + L2 LINE L2 2016 2563 -751 2446 85 3 0 chr10 26883140 26883447 -118705841 + AluY SINE Alu 1 308 -3 2254 281 81 19 chr10 26883447 26883773 -118705515 + L2 LINE L2 2563 2867 -447 996 195 147 51 chr10 26883859 26884192 -118705096 + MLT1A1 LTR MaLR 1 365 0 213 247 86 49 chr10 26884505 26884586 -118704702 + L2 LINE L2 2649 2732 -582 16586 37 5 0 chr10 26884594 26887394 -118701894 - L1PA5 LINE L1 0 6154 3350 1534 217 56 13 chr10 26887501 26887874 -118701414 + MLT1D LTR MaLR 3 391 -114 457 319 7 7 chr10 26888254 26888392 -118700896 + L2 LINE L2 3134 3271 -1 287 337 36 98 chr10 26890154 26890347 -118698941 - MIR3 SINE MIR -7 201 21 304 183 56 0 chr10 26890574 26890645 -118698643 + MER116 DNA Mariner 6 80 0 1226 203 8 4 chr10 26890923 26891160 -118698128 - L1MC4 LINE L1 -1013 7029 6792 279 54 0 0 chr10 26892122 26892159 -118697129 + (TG)n Simple_repeat Simple_repeat 2 38 0 4020 46 0 4 chr10 26892280 26892777 -118696511 - L1PA5 LINE L1 -4 6150 5656 544 215 54 34 chr10 26892779 26892984 -118696304 - HAL1b LINE L1 -311 1037 829 248 280 0 13 chr10 26893013 26893088 -118696200 - HAL1b LINE L1 -931 417 344 1890 106 8 0 chr10 26893090 26893346 -118695942 - AluSq SINE Alu -55 258 1 21 36 0 0 chr10 26893428 26893456 -118695832 + AT_rich Low_complexity Low_complexity 1 28 0 200 294 0 55 chr10 26893641 26893750 -118695538 + T-rich Low_complexity Low_complexity 3 105 0 2357 172 24 2 chr10 26893948 26894413 -118694875 - L1MB4 LINE L1 0 6180 5706 3355 214 69 12 chr10 26894438 26895203 -118694085 + MER54A LTR ERVL 93 901 0 1695 156 13 15 chr10 26895203 26895536 -118693752 - L1P2 LINE L1 -445 5709 5374 1581 211 3 7 chr10 26895820 26896114 -118693174 - AluJo SINE Alu -19 293 1 1402 255 59 15 chr10 26896232 26896624 -118692664 + L2 LINE L2 2135 2543 -771 464 260 80 47 chr10 26896773 26896923 -118692365 + L2 LINE L2 3158 3312 -1 597 330 25 13 chr10 26897302 26897538 -118691750 + L2 LINE L2 2804 3042 -271 1183 249 61 9 chr10 26899029 26899359 -118689929 + MLT1A1 LTR MaLR 1 347 -18 1320 249 27 22 chr10 26899571 26899977 -118689311 + L1ME1 LINE L1 5741 6148 -18 272 254 138 35 chr10 26900130 26900363 -118688925 - L1MEd LINE L1 -2944 3185 2911 1827 150 0 48 chr10 26900363 26900676 -118688612 - AluJb SINE Alu -14 298 1 272 254 138 35 chr10 26900676 26900753 -118688535 - L1MEd LINE L1 -3218 2911 2843 2011 154 3 0 chr10 26900805 26901104 -118688184 - AluSq SINE Alu -13 300 1 330 132 0 0 chr10 26901195 26901248 -118688040 + (CATA)n Simple_repeat Simple_repeat 2 54 0 927 296 88 11 chr10 26901248 26901795 -118687493 - L1MEd LINE L1 -3384 2745 2157 21 57 0 0 chr10 26901964 26901999 -118687289 + AT_rich Low_complexity Low_complexity 1 35 0 253 293 35 0 chr10 26902051 26902109 -118687179 + MIR SINE MIR 4 63 -199 3275 104 21 4 chr10 26902112 26902591 -118686697 + LTR15 LTR ERV1 1 487 -6 373 295 31 8 chr10 26902622 26902751 -118686537 + MIR SINE MIR 120 251 -11 297 169 0 0 chr10 26902756 26902815 -118686473 + (CAG)n Simple_repeat Simple_repeat 2 60 0 203 111 37 37 chr10 26903181 26903235 -118686053 + (TTAA)n Simple_repeat Simple_repeat 1 54 0 1082 304 96 40 chr10 26903284 26904246 -118685042 - L1MEd LINE L1 -4902 1217 332 219 36 0 0 chr10 26904459 26904487 -118684801 + (TC)n Simple_repeat Simple_repeat 2 29 0 1629 191 0 20 chr10 26904706 26905010 -118684278 + AluJo SINE Alu 1 298 -14 504 333 14 0 chr10 26906067 26906214 -118683074 + MIR3 SINE MIR 33 181 -27 350 236 210 19 chr10 26906590 26906747 -118682541 - MER5A DNA MER1_type 0 189 3 23 0 0 0 chr10 26907802 26907825 -118681463 + AT_rich Low_complexity Low_complexity 1 23 0 2062 131 10 3 chr10 26907980 26908285 -118681003 + AluJb SINE Alu 1 307 -5 284 263 71 50 chr10 26908882 26908981 -118680307 + MIR SINE MIR 31 131 -77 242 256 26 13 chr10 26909466 26909544 -118679744 + GA-rich Low_complexity Low_complexity 1 79 0 1664 139 87 4 chr10 26910018 26910284 -118679004 + AluSq SINE Alu 1 288 -25 209 362 111 39 chr10 26910532 26910839 -118678449 - L2 LINE L2 -24 3289 2961 367 326 43 0 chr10 26911935 26912073 -118677215 + MIR SINE MIR 111 254 -8 218 309 149 0 chr10 26912091 26912185 -118677103 - MIR SINE MIR -76 132 25 27 49 0 0 chr10 26913821 26913862 -118675426 + AT_rich Low_complexity Low_complexity 1 41 0 2173 123 40 40 chr10 26914157 26914532 -118674756 + THE1C LTR MaLR 1 375 0 240 295 134 13 chr10 26915219 26915368 -118673920 - L2 LINE L2 -29 3284 3118 272 347 0 0 chr10 26915629 26915724 -118673564 - L2 LINE L2 -556 2758 2664 330 336 31 87 chr10 26916043 26916468 -118672820 - MLT1I LTR MaLR -8 401 1 840 268 51 104 chr10 26916908 26917479 -118671809 - MLT1H1 LTR MaLR 0 555 1 2071 128 7 0 chr10 26917636 26917924 -118671364 - AluSx SINE Alu -22 290 1 2361 221 58 2 chr10 26918104 26918709 -118670579 + L1MC1 LINE L1 4696 5334 -812 1398 199 33 13 chr10 26918710 26919016 -118670272 + L1MC1 LINE L1 6016 6327 -6 31 26 0 0 chr10 26919061 26919099 -118670189 + AT_rich Low_complexity Low_complexity 1 38 0 26 0 0 0 chr10 26919581 26919607 -118669681 + AT_rich Low_complexity Low_complexity 1 26 0 786 171 89 13 chr10 26920359 26920517 -118668771 - MER5B DNA MER1_type 0 178 9 542 320 75 72 chr10 26920895 26921510 -118667778 + L1MEd LINE L1 90 706 -5413 625 270 146 28 chr10 26921692 26922471 -118666817 + L1M4 LINE L1 4068 4938 -1208 1070 232 13 18 chr10 26922473 26922614 -118666674 + MER58A DNA MER1_type 2 143 -2277 2055 142 39 94 chr10 26922614 26923072 -118666216 + Tigger2a DNA MER2_type 1 433 -1 1070 232 13 18 chr10 26923072 26923154 -118666134 + MER58A DNA MER1_type 143 224 0 426 242 70 53 chr10 26923166 26923451 -118665837 + L1M4 LINE L1 4942 5231 -915 287 83 0 0 chr10 26924257 26924293 -118664995 + U2 snRNA snRNA 1 36 -152 615 275 18 92 chr10 26924334 26924432 -118664856 - L3 LINE CR1 -600 977 873 1562 224 75 14 chr10 26924432 26924803 -118664485 + MSTD LTR MaLR 3 396 0 615 275 18 92 chr10 26924803 26925039 -118664249 - L3 LINE CR1 -704 873 668 216 0 0 0 chr10 26925091 26925115 -118664173 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1343 170 6 112 chr10 26925126 26925438 -118663850 - AluJb SINE Alu -33 279 1 26 64 0 0 chr10 26925538 26925585 -118663703 + AT_rich Low_complexity Low_complexity 1 47 0 2133 225 90 54 chr10 26925824 26926183 -118663105 + MLT1E1 LTR MaLR 1 394 -260 180 0 0 0 chr10 26926183 26926203 -118663085 + (CAAAA)n Simple_repeat Simple_repeat 5 24 0 2133 225 90 54 chr10 26926203 26926474 -118662814 + MLT1E1 LTR MaLR 394 654 0 21185 46 49 3 chr10 26928467 26931186 -118658102 + L1P LINE L1 1 2845 -3301 748 293 12 30 chr10 26931322 26931653 -118657635 + L1ME1 LINE L1 5824 6148 -18 526 263 158 56 chr10 26931795 26932040 -118657248 - L1MDa LINE L1 -2931 3609 3322 1448 196 3 48 chr10 26932040 26932352 -118656936 - AluJb SINE Alu -14 298 1 526 263 158 56 chr10 26932352 26932429 -118656859 - L1MDa LINE L1 -3218 3322 3254 2106 137 3 0 chr10 26932480 26932780 -118656508 - AluSq SINE Alu -12 301 1 312 137 0 0 chr10 26932871 26932922 -118656366 + (CATA)n Simple_repeat Simple_repeat 2 52 0 884 263 41 26 chr10 26933111 26933560 -118655728 - L1MDa LINE L1 -3616 2924 2471 195 222 0 22 chr10 26983714 26983759 -118605529 + MIR SINE MIR 216 259 -3 609 277 62 36 chr10 26984660 26984884 -118604404 - MLT1I LTR MaLR -18 391 162 28 29 0 0 chr10 26985824 26985859 -118603429 + AT_rich Low_complexity Low_complexity 1 35 0 1465 213 7 0 chr10 26986039 26986326 -118602962 - LTR51 LTR ERV1 -155 516 228 424 237 35 9 chr10 26986493 26986607 -118602681 - MER101B LTR ERV1 -453 117 1 1045 178 13 49 chr10 26986708 26986933 -118602355 - MER20 DNA MER1_type 0 219 3 868 233 139 88 chr10 26987016 26987407 -118601881 - MLT1G LTR MaLR 0 590 167 2167 124 10 0 chr10 26987407 26987706 -118601582 - AluSx SINE Alu -10 302 1 868 233 139 88 chr10 26987706 26987882 -118601406 - MLT1G LTR MaLR -423 167 1 198 0 0 0 chr10 26988227 26988249 -118601039 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 13090 182 42 13 chr10 26988252 26993062 -118596226 - L1PB1 LINE L1 -3 6864 1905 3514 10 2 0 chr10 26993062 26993464 -118595824 - L1PA2 LINE L1 -1 6154 5752 231 211 0 0 chr10 26995910 26996005 -118593283 + (TA)n Simple_repeat Simple_repeat 1 95 0 667 200 0 0 chr10 26996029 26996154 -118593134 - FAM SINE Alu -26 159 35 370 259 85 55 chr10 26996378 26996579 -118592709 + L2 LINE L2 3092 3298 -15 2211 165 57 23 chr10 26996591 26997063 -118592225 - L1MB7 LINE L1 -16 6168 5681 21 57 0 0 chr10 26997694 26997729 -118591559 + AT_rich Low_complexity Low_complexity 1 35 0 208 354 105 79 chr10 27005156 27005272 -118584016 + L2 LINE L2 2897 3009 -263 384 212 44 66 chr10 27005272 27005344 -118583944 + MER94 DNA DNA 1 70 -64 1809 164 3 23 chr10 27005344 27005643 -118583645 + AluJo SINE Alu 1 293 -19 384 212 44 66 chr10 27005643 27005707 -118583581 + MER94 DNA DNA 70 134 0 208 354 105 79 chr10 27005707 27005943 -118583345 + L2 LINE L2 3009 3258 -14 2153 113 0 7 chr10 27007236 27007527 -118581761 + AluSq SINE Alu 1 289 -24 2019 157 0 3 chr10 27007685 27007991 -118581297 + AluJo SINE Alu 1 305 -7 270 369 89 0 chr10 27008013 27008170 -118581118 + MIR3 SINE MIR 36 206 -2 273 57 0 0 chr10 27008170 27008205 -118581083 + (TG)n Simple_repeat Simple_repeat 2 36 0 25 0 0 0 chr10 27009442 27009467 -118579821 + AT_rich Low_complexity Low_complexity 1 25 0 1473 82 0 0 chr10 27009467 27009661 -118579627 - L1PA7 LINE L1 -4 6150 5957 2465 73 26 2 chr10 27009661 27010232 -118579056 + L1P3 LINE L1 5023 5603 -551 505 98 49 0 chr10 27010262 27010344 -118578944 - L1MA1 LINE L1 -6 7715 7630 13966 167 38 34 chr10 27010452 27017365 -118571923 - L1MA1 LINE L1 -405 7319 14 2020 153 7 0 chr10 27017376 27017677 -118571611 - AluSq SINE Alu -10 303 1 815 266 111 74 chr10 27018221 27018706 -118570582 + MLT1J LTR MaLR 3 505 -6 576 245 86 68 chr10 27018972 27019250 -118570038 - LTR26 LTR ERV1 0 727 348 970 183 58 144 chr10 27019726 27020038 -118569250 - LTR8 LTR ERV1 -436 255 1 28322 115 25 69 chr10 27020386 27026588 -118562700 + L1PA7 LINE L1 12 5923 -231 5216 54 9 1 chr10 27026588 27027239 -118562049 + L1PA7 LINE L1 5490 6147 -7 3385 140 25 27 chr10 27027784 27028414 -118560874 + L1PB4 LINE L1 5520 6148 -8 448 259 26 99 chr10 27028924 27029156 -118560132 + MLT1I LTR MaLR 194 408 -1 1901 162 17 28 chr10 27029371 27029397 -118559891 - L1PA15 LINE L1 -17 6148 6123 1917 161 0 3 chr10 27029397 27029688 -118559600 - AluJb SINE Alu -22 290 1 1901 162 17 28 chr10 27029688 27030020 -118559268 - L1PA15 LINE L1 -42 6123 5794 2244 88 115 6 chr10 27031347 27031687 -118557601 + MER51B LTR ERV1 1 377 0 817 121 0 0 chr10 27031983 27032099 -118557189 - AluJb SINE Alu -14 298 183 256 156 0 0 chr10 27032118 27032163 -118557125 + AluJb SINE Alu 67 111 -191 * 356 231 0 0 chr10 27032160 27032238 -118557050 - AluJ/FLAM SINE Alu -233 69 1 2016 153 0 0 chr10 27033179 27033467 -118555821 - AluSx SINE Alu -24 288 1 1834 167 0 0 chr10 27034440 27034727 -118554561 - AluJb SINE Alu -25 287 1 4169 54 5 0 chr10 27034928 27035500 -118553788 - L1P LINE L1 -5571 575 1 1785 116 20 3 chr10 27035506 27035807 -118553481 - L1PBa LINE L1 -4950 1913 1608 428 88 0 0 chr10 27035808 27035865 -118553423 - U6 snRNA snRNA -1 106 50 406 352 62 6 chr10 27036163 27036325 -118552963 + MIR3 SINE MIR 21 191 -17 2287 180 165 10 chr10 27037086 27037679 -118551609 - MER76 LTR ERV -2 686 2 437 243 118 0 chr10 27037718 27037854 -118551434 + L1MB8 LINE L1 2510 2661 -3485 * 4630 183 61 34 chr10 27037852 27039917 -118549371 + L1MB8 LINE L1 4062 6172 -6 2228 117 10 3 chr10 27039934 27040241 -118549047 + AluSx SINE Alu 1 309 -3 549 311 52 16 chr10 27040287 27040596 -118548692 + L1ME3 LINE L1 47 366 -5704 485 254 105 28 chr10 27040608 27040856 -118548432 - LTR41 LTR ERVL -7 766 500 1421 236 149 13 chr10 27040984 27041695 -118547593 + L1ME3 LINE L1 2117 2924 -3156 1642 255 55 7 chr10 27042185 27042770 -118546518 + L1ME3 LINE L1 4262 4874 -1206 2157 91 14 0 chr10 27042813 27043100 -118546188 + AluY SINE Alu 1 291 -20 229 316 0 0 chr10 27044036 27044112 -118545176 + L1ME3 LINE L1 5825 5900 -196 198 243 71 29 chr10 27044931 27045001 -118544287 + MIR SINE MIR 50 122 -140 236 240 110 20 chr10 27045502 27045602 -118543686 - MIR SINE MIR -90 172 64 455 285 65 34 chr10 27046587 27046878 -118542410 - L1MC4a LINE L1 -1884 5924 5625 226 403 47 20 chr10 27047005 27047154 -118542134 + MER5B DNA MER1_type 23 175 -3 892 241 53 4 chr10 27047503 27047748 -118541540 + MIR SINE MIR 4 260 -2 901 126 24 0 chr10 27048064 27048191 -118541097 + AluSq/x SINE Alu 1 130 -182 261 0 0 0 chr10 27048191 27048220 -118541068 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1416 143 0 108 chr10 27048221 27048480 -118540808 + AluSx SINE Alu 57 287 -25 192 77 0 0 chr10 27048483 27048509 -118540779 + (CAGA)n Simple_repeat Simple_repeat 2 27 0 1502 246 140 19 chr10 27048875 27049404 -118539884 + MLT1E LTR MaLR 1 593 0 409 336 14 7 chr10 27049685 27049831 -118539457 - MIR SINE MIR -114 148 2 31 99 0 0 chr10 27049911 27050012 -118539276 + AT_rich Low_complexity Low_complexity 1 101 0 334 314 83 0 chr10 27050892 27051013 -118538275 - MER91B DNA MER1_type -58 132 2 26 30 0 0 chr10 27051398 27051431 -118537857 + AT_rich Low_complexity Low_complexity 1 33 0 2234 112 147 5 chr10 27051483 27051858 -118537430 + MSTA LTR MaLR 1 428 0 192 77 0 0 chr10 27052050 27052076 -118537212 + (TTG)n Simple_repeat Simple_repeat 2 27 0 388 230 42 108 chr10 27052288 27052322 -118536966 - L1ME4a LINE L1 -153 5968 5933 788 214 0 88 chr10 27052322 27052514 -118536774 - FAM SINE Alu 0 175 1 388 230 42 108 chr10 27052514 27052692 -118536596 - L1ME4a LINE L1 -188 5933 5770 21 0 0 0 chr10 27053356 27053377 -118535911 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr10 27053468 27053490 -118535798 + AT_rich Low_complexity Low_complexity 1 22 0 7513 30 6 0 chr10 27053803 27054785 -118534503 + L1PA5 LINE L1 5159 6145 -9 297 0 0 0 chr10 27054785 27054818 -118534470 + (TA)n Simple_repeat Simple_repeat 2 34 0 287 288 17 0 chr10 27054885 27055028 -118534260 - L1ME4a LINE L1 -581 5581 5434 227 294 49 10 chr10 27055106 27055208 -118534080 - L1ME4a LINE L1 -837 5309 5204 232 139 76 13 chr10 27055663 27055742 -118533546 + (TTATA)n Simple_repeat Simple_repeat 1 84 0 2413 83 3 3 chr10 27056289 27056591 -118532697 + AluSq SINE Alu 1 302 -11 2148 125 0 0 chr10 27056881 27057169 -118532119 - AluSx SINE Alu -24 288 1 1461 234 23 0 chr10 27057233 27057587 -118531701 - L1PB4 LINE L1 -8 6148 5787 264 282 14 0 chr10 27058133 27058204 -118531084 + MIR SINE MIR 86 157 -105 23 54 0 0 chr10 27058427 27058464 -118530824 + AT_rich Low_complexity Low_complexity 1 37 0 6318 64 2 0 chr10 27058464 27059308 -118529980 - L1PA7 LINE L1 -7 6147 5302 201 178 0 0 chr10 27059492 27059537 -118529751 + CT-rich Low_complexity Low_complexity 3 47 0 266 290 80 20 chr10 27059545 27059645 -118529643 - L2 LINE L2 -2 3270 3165 778 228 37 5 chr10 27061297 27061488 -118527800 + L1P LINE L1 4821 5021 -1125 2375 78 0 0 chr10 27061488 27061782 -118527506 + AluY SINE Alu 1 294 -17 778 228 37 5 chr10 27061782 27061805 -118527483 + L1P LINE L1 5021 5042 -1104 244 180 20 0 chr10 27062367 27062417 -118526871 + Alu SINE Alu 2 52 -256 236 96 115 0 chr10 27062417 27062494 -118526794 + Alu SINE Alu 245 327 0 214 314 26 85 chr10 27062494 27062647 -118526641 + MIR SINE MIR 20 163 -99 402 219 36 122 chr10 27063111 27063240 -118526048 - LTR41 LTR ERVL -10 763 669 1873 157 20 16 chr10 27063240 27063546 -118525742 + AluSx SINE Alu 1 307 -5 402 219 36 122 chr10 27063546 27063694 -118525594 - LTR41 LTR ERVL -104 669 510 306 190 117 61 chr10 27063959 27064122 -118525166 - LTR41 LTR ERVL -601 172 1 237 139 0 0 chr10 27064324 27064367 -118524921 + (TTTC)n Simple_repeat Simple_repeat 2 44 0 23791 37 0 0 chr10 27064475 27067513 -118521775 - L1P LINE L1 -1034 5112 2075 552 213 73 0 chr10 27068659 27068795 -118520493 + MER103 DNA DNA 3 148 -18 265 169 48 24 chr10 27068824 27068907 -118520381 + L1ME4a LINE L1 5984 6068 -53 196 222 79 32 chr10 27069651 27069714 -118519574 + L2 LINE L2 2102 2167 -1147 864 272 19 38 chr10 27071580 27071845 -118517443 + MIR SINE MIR 3 262 0 3525 106 6 0 chr10 27072596 27073089 -118516199 + LOR1a LTR ERV1 2 497 0 2043 118 3 37 chr10 27073237 27073558 -118515730 + AluSg SINE Alu 1 310 0 1844 181 0 0 chr10 27073949 27074253 -118515035 - AluSx SINE Alu -8 304 1 236 258 55 86 chr10 27074540 27074668 -118514620 + L2 LINE L2 3145 3268 -4 596 285 42 72 chr10 27074803 27075164 -118514124 + MER93a LTR ERV1 53 402 0 200 362 0 0 chr10 27076880 27076938 -118512350 - MIR SINE MIR -130 78 21 2088 110 55 58 chr10 27077750 27078115 -118511173 + THE1B LTR MaLR 1 364 0 1381 148 48 65 chr10 27078590 27078723 -118510565 + AluJo SINE Alu 1 135 -167 2570 17 0 14 chr10 27078723 27079054 -118510234 + AluYb8 SINE Alu 2 328 0 1381 148 48 65 chr10 27079054 27079209 -118510079 + AluJo SINE Alu 135 285 -17 567 100 0 11 chr10 27080913 27081003 -118508285 - AluSg/x SINE Alu -3 306 218 435 307 139 36 chr10 27081484 27081927 -118507361 - L2 LINE L2 -5 3267 2716 883 255 56 4 chr10 27082546 27082777 -118506511 + MIR SINE MIR 10 252 -10 641 330 16 33 chr10 27083304 27083570 -118505718 - MIR SINE MIR 0 262 3 349 175 63 0 chr10 27085129 27085192 -118504096 + L2 LINE L2 3242 3308 -5 1198 41 0 0 chr10 27085470 27085617 -118503671 - L1PA4 LINE L1 -4 6151 6005 245 301 231 32 chr10 27086992 27087148 -118502140 + MIR3 SINE MIR 9 195 -13 269 281 0 49 chr10 27087460 27087542 -118501746 + L2 LINE L2 3236 3313 0 1183 239 82 31 chr10 27087639 27088128 -118501160 - MER113 DNA MER1_type? -3 518 5 624 193 40 62 chr10 27089655 27089831 -118499457 - MER97a DNA MER1_type? -722 172 1 343 141 71 10 chr10 27089872 27089971 -118499317 + GA-rich Low_complexity Low_complexity 4 108 0 6311 30 6 0 chr10 27089979 27090774 -118498514 - L1P LINE L1 -1385 4761 3962 21 0 0 0 chr10 27093157 27093178 -118496110 + AT_rich Low_complexity Low_complexity 1 21 0 2265 199 97 8 chr10 27093803 27094452 -118494836 - L1M4 LINE L1 -3189 3455 2749 363 296 126 0 chr10 27094463 27094662 -118494626 + L1ME4a LINE L1 5507 5730 -391 304 274 105 0 chr10 27094675 27094799 -118494489 + L1ME4a LINE L1 5798 5934 -187 2524 72 0 0 chr10 27095366 27095673 -118493615 - AluY SINE Alu 0 311 5 2919 258 70 8 chr10 27097217 27098382 -118490906 - L1M4 LINE L1 -2789 3357 2121 805 258 97 12 chr10 27098388 27098818 -118490470 - L1M4 LINE L1 -3828 2816 2357 2374 252 128 41 chr10 27098947 27100006 -118489282 - L1M4 LINE L1 -5380 1162 12 352 329 77 18 chr10 27100668 27100838 -118488450 + MIR3 SINE MIR 9 188 -20 5015 80 30 1 chr10 27100841 27101541 -118487747 - LTR30 LTR ERV1 -2 720 1 804 251 18 0 chr10 27102429 27102592 -118486696 - MER5A DNA MER1_type 0 189 24 561 324 119 60 chr10 27102765 27103698 -118485590 - L2 LINE L2 -452 2862 1875 248 286 0 0 chr10 27104974 27105030 -118484258 + L2 LINE L2 3205 3260 -12 2231 87 0 27 chr10 27105724 27106023 -118483265 + AluSx SINE Alu 5 295 -17 24 0 0 0 chr10 27106054 27106078 -118483210 + AT_rich Low_complexity Low_complexity 1 24 0 1071 158 6 0 chr10 27107437 27107608 -118481680 + FAM SINE Alu 1 172 -3 234 0 0 0 chr10 27109236 27109262 -118480026 + (A)n Simple_repeat Simple_repeat 1 26 0 2318 113 0 0 chr10 27109696 27109997 -118479291 + AluSg SINE Alu 3 303 -7 1094 161 0 0 chr10 27110010 27110171 -118479117 + AluSg/x SINE Alu 137 297 -15 858 202 16 16 chr10 27110501 27110689 -118478599 + MER5A DNA MER1_type 2 189 0 335 151 14 0 chr10 27111145 27111218 -118478070 - L1PB3 LINE L1 0 6154 6081 1835 114 23 8 chr10 27111319 27111581 -118477707 - AluSq SINE Alu -47 266 1 21 0 0 0 chr10 27111778 27111799 -118477489 + AT_rich Low_complexity Low_complexity 1 21 0 2236 120 0 0 chr10 27112228 27112536 -118476752 - AluSc SINE Alu 0 309 2 5017 84 3 0 chr10 27112796 27113454 -118475834 + PABL_A LTR ERV1 1 660 0 217 341 100 4 chr10 27113506 27113646 -118475642 + MIR SINE MIR 47 208 -54 762 186 0 0 chr10 27114302 27114431 -118474857 + FLAM_C SINE Alu 4 132 -1 357 305 11 46 chr10 27114656 27114812 -118474476 - MIR3 SINE MIR -14 194 44 420 283 110 7 chr10 27114902 27115047 -118474241 - MIR3 SINE MIR -8 200 41 688 197 54 27 chr10 27115091 27115238 -118474050 + L3 LINE CR1 244 394 -1183 278 211 253 21 chr10 27116078 27116173 -118473115 + L3 LINE CR1 558 674 -903 316 372 41 25 chr10 27116219 27116415 -118472873 + L3 LINE CR1 1377 1575 -2 586 329 104 37 chr10 27117254 27117775 -118471513 - L2 LINE L2 -223 3049 2491 1709 163 62 3 chr10 27118213 27118501 -118470787 - AluJo SINE Alu -7 305 1 29 0 0 0 chr10 27119306 27119335 -118469953 + AT_rich Low_complexity Low_complexity 1 29 0 411 304 33 24 chr10 27120352 27120687 -118468601 + L1ME4a LINE L1 5531 5868 -253 2472 126 40 26 chr10 27120829 27121251 -118468037 + MSTA LTR MaLR 1 428 0 660 266 28 20 chr10 27121303 27121555 -118467733 - MLT2F LTR ERVL -15 648 395 235 167 0 21 chr10 27121557 27121605 -118467683 + MLT1K LTR MaLR 540 586 -2 1641 198 7 3 chr10 27122256 27122559 -118466729 + AluJo SINE Alu 2 305 -7 749 58 0 10 chr10 27123063 27123167 -118466121 + (GAAA)n Simple_repeat Simple_repeat 2 104 0 264 167 0 0 chr10 27123167 27123215 -118466073 + GA-rich Low_complexity Low_complexity 2 49 0 1049 114 12 0 chr10 27123224 27123391 -118465897 + (GAAA)n Simple_repeat Simple_repeat 1 169 0 381 252 36 0 chr10 27124216 27124355 -118464933 - L1MA10 LINE L1 -9 6325 6182 229 294 18 18 chr10 27124800 27124909 -118464379 + GA-rich Low_complexity Low_complexity 3 111 0 2574 222 118 36 chr10 27125648 27126388 -118462900 - L1ME1 LINE L1 -55 6111 5433 2755 152 35 106 chr10 27126388 27127132 -118462156 - LTR8 LTR ERV1 0 691 1 2574 222 118 36 chr10 27127132 27127187 -118462101 - L1ME1 LINE L1 -733 5433 5384 921 212 0 0 chr10 27127187 27127352 -118461936 - FRAM SINE Alu 0 166 2 2574 222 118 36 chr10 27127352 27127761 -118461527 - L1ME1 LINE L1 -782 5384 5010 2366 109 64 12 chr10 27127761 27128165 -118461123 - MSTA LTR MaLR -3 425 1 2574 222 118 36 chr10 27128165 27128749 -118460539 - L1ME1 LINE L1 -1156 5010 4161 6412 146 9 7 chr10 27128768 27130862 -118458426 - L1MA2 LINE L1 -1 7722 5620 4163 188 58 21 chr10 27130868 27132158 -118457130 - L1MA2 LINE L1 -2807 4758 3415 * 8118 118 82 5 chr10 27132150 27132892 -118456396 - L1MA2 LINE L1 -5029 2536 1853 198 0 0 0 chr10 27132892 27132914 -118456374 + (TC)n Simple_repeat Simple_repeat 2 23 0 8118 118 82 5 chr10 27132914 27133507 -118455781 - L1MA2 LINE L1 -5712 1853 1097 405 105 18 0 chr10 27133681 27133738 -118455550 - AluSp SINE Alu -122 191 134 1126 128 0 21 chr10 27133738 27133926 -118455362 - AluSg/x SINE Alu -8 304 121 216 129 16 32 chr10 27134078 27134140 -118455148 + CT-rich Low_complexity Low_complexity 2 62 0 216 355 16 13 chr10 27134166 27134362 -118454926 + CT-rich Low_complexity Low_complexity 1 196 0 242 254 17 34 chr10 27134537 27134655 -118454633 + CT-rich Low_complexity Low_complexity 5 120 0 870 180 47 55 chr10 27134776 27135032 -118454256 + pTR5 LTR ERV1 1774 2027 -411 321 202 32 21 chr10 27135034 27135128 -118454160 + LTR30 LTR ERV1 548 642 -80 1649 99 152 4 chr10 27135129 27135451 -118453837 + LTR12 LTR ERV1 375 714 0 2002 112 3 17 chr10 27135455 27135762 -118453526 + AluSx SINE Alu 1 303 0 223 321 12 12 chr10 27135878 27135962 -118453326 + MIR SINE MIR 8 91 -171 352 80 0 0 chr10 27135977 27136027 -118453261 + MADE1 DNA Mariner 25 74 -6 304 269 28 28 chr10 27136035 27136143 -118453145 + MIR SINE MIR 117 224 -38 519 173 144 0 chr10 27136783 27136887 -118452401 + Tigger1 DNA MER2_type 2299 2417 -1 2142 248 61 40 chr10 27136896 27137016 -118452272 + L1M4 LINE L1 356 472 -6070 2265 77 3 7 chr10 27137016 27137303 -118451985 + AluSc SINE Alu 1 286 -23 2142 248 61 40 chr10 27137303 27137925 -118451363 + L1M4 LINE L1 472 1113 -5429 488 226 99 28 chr10 27137933 27138145 -118451143 + L1M4 LINE L1 1536 1762 -4884 276 128 0 0 chr10 27138274 27138321 -118450967 - HERVH LTR ERV1 -2067 5646 5600 7845 112 2 1 chr10 27138322 27139506 -118449782 - HERVH LTR ERV1 -2287 4242 3962 3556 173 41 2 chr10 27139799 27140435 -118448853 - L1M1 LINE L1 -6889 676 16 4180 254 64 14 chr10 27140458 27142586 -118446702 - L1MEc LINE L1 -1998 4217 2010 2427 302 87 25 chr10 27142587 27143378 -118445910 - L1MEc LINE L1 -4432 1964 1224 1929 130 3 50 chr10 27143378 27143712 -118445576 - AluSc SINE Alu 0 309 1 2427 302 87 25 chr10 27143712 27144717 -118444571 - L1MEc LINE L1 -5172 1224 55 967 244 46 34 chr10 27145399 27146081 -118443207 + L1M4 LINE L1 1797 2578 -4068 257 46 132 34 chr10 27146088 27146149 -118443139 - MLT2A1 LTR ERVL 0 453 388 202 108 77 0 chr10 27146241 27146306 -118442982 + (TATAA)n Simple_repeat Simple_repeat 5 74 0 2822 69 23 5 chr10 27146332 27146725 -118442563 - MLT2A1 LTR ERVL -44 400 1 3945 243 29 30 chr10 27146725 27148299 -118440989 + L1M4 LINE L1 2580 4152 -2492 1665 164 82 37 chr10 27148304 27148531 -118440757 + L1MC3 LINE L1 7358 7612 -173 2565 66 0 0 chr10 27148531 27148835 -118440453 + AluY SINE Alu 1 304 -7 1665 164 82 37 chr10 27148835 27149010 -118440278 + L1MC3 LINE L1 7612 7778 -7 1394 188 68 34 chr10 27149319 27149447 -118439841 + AluJo SINE Alu 3 125 -187 414 0 0 0 chr10 27149447 27149493 -118439795 + (TAA)n Simple_repeat Simple_repeat 2 47 0 1394 188 68 34 chr10 27149493 27149657 -118439631 + AluJo SINE Alu 125 305 -7 716 61 0 10 chr10 27149674 27149773 -118439515 + (GGAA)n Simple_repeat Simple_repeat 3 100 0 22 35 0 0 chr10 27150865 27150894 -118438394 + AT_rich Low_complexity Low_complexity 1 29 0 31 44 0 0 chr10 27152718 27152763 -118436525 + AT_rich Low_complexity Low_complexity 1 45 0 2039 128 62 0 chr10 27153120 27153408 -118435880 - AluSx SINE Alu -6 306 1 917 184 168 76 chr10 27153709 27154104 -118435184 - MLT2B1 LTR ERVL -53 501 1 2293 108 0 3 chr10 27154704 27155030 -118434258 - AluSq SINE Alu 0 313 1 466 245 63 106 chr10 27155043 27155374 -118433914 - L2 LINE L2 -64 3249 2933 3408 305 128 30 chr10 27155418 27155539 -118433749 - L2 LINE L2 0 3313 3205 2209 106 41 52 chr10 27155539 27155907 -118433381 + THE1B LTR MaLR 1 364 0 3408 305 128 30 chr10 27155907 27157553 -118431735 - L2 LINE L2 -108 3205 1279 2103 155 19 14 chr10 27157553 27157915 -118431373 + THE1B LTR MaLR 1 364 0 3408 305 128 30 chr10 27157915 27158290 -118430998 - L2 LINE L2 -2034 1279 942 2032 159 3 0 chr10 27158299 27158607 -118430681 + AluSx SINE Alu 1 309 -3 236 360 7 4 chr10 27159007 27159170 -118430118 + C-rich Low_complexity Low_complexity 2 276 0 183 158 12 37 chr10 27159181 27159263 -118430025 + (CAG)n Simple_repeat Simple_repeat 1 80 0 754 39 0 19 chr10 27159274 27159378 -118429910 + (GAA)n Simple_repeat Simple_repeat 1 102 0 209 306 0 0 chr10 27159481 27159530 -118429758 + polypyrimidine Low_complexity Low_complexity 3 51 0 873 108 0 14 chr10 27160506 27160645 -118428643 + LTR7 LTR ERV1 312 448 -2 1320 252 72 20 chr10 27160645 27161244 -118428044 + L1M4 LINE L1 4233 4862 -1284 402 213 110 8 chr10 27161711 27161838 -118427450 + MER39B LTR ERV1 5 144 -509 834 173 7 7 chr10 27161838 27161988 -118427300 + AluSq/x SINE Alu 1 150 -162 372 157 12 12 chr10 27162018 27162101 -118427187 + GA-rich Low_complexity Low_complexity 3 85 0 1019 88 18 12 chr10 27162101 27162272 -118427016 + (GGAA)n Simple_repeat Simple_repeat 4 175 0 365 224 31 0 chr10 27162346 27162444 -118426844 + MER39B LTR ERV1 137 237 -416 24 32 0 0 chr10 27162444 27162475 -118426813 + AT_rich Low_complexity Low_complexity 1 31 0 792 133 0 0 chr10 27162475 27162588 -118426700 - FLAM_C SINE Alu -16 117 5 2427 129 9 14 chr10 27162600 27163019 -118426269 + MER39B LTR ERV1 232 648 -5 2201 103 3 0 chr10 27163198 27163521 -118425767 - AluSx SINE Alu 0 324 1 494 228 12 18 chr10 27164116 27164287 -118425001 + CT-rich Low_complexity Low_complexity 4 173 0 2586 116 6 0 chr10 27164298 27164660 -118424628 + THE1B LTR MaLR 1 364 0 229 218 26 0 chr10 27164672 27164750 -118424538 + CT-rich Low_complexity Low_complexity 2 81 0 2826 167 78 15 chr10 27164827 27165433 -118423855 - LTR48B LTR ERV1 0 644 1 1792 102 110 0 chr10 27165540 27165832 -118423456 - AluSx SINE Alu 0 320 1 482 248 117 7 chr10 27166051 27166196 -118423092 + MIR SINE MIR 95 255 -7 1892 169 3 0 chr10 27166314 27166610 -118422678 - AluJo SINE Alu -15 297 1 1344 141 4 4 chr10 27166684 27166911 -118422377 + L1MA4A LINE L1 6066 6292 -11 2764 82 20 5 chr10 27167391 27167783 -118421505 + L1PA10 LINE L1 5767 6164 -4 192 200 0 0 chr10 27168274 27168334 -118420954 + A-rich Low_complexity Low_complexity 1 60 0 1911 199 28 114 chr10 27168399 27169068 -118420220 - LTR9 LTR ERV1 0 612 1 309 264 0 11 chr10 27169197 27169288 -118420000 - L1ME2 LINE L1 -180 5984 5895 581 197 78 0 chr10 27169384 27169526 -118419762 + L1M4 LINE L1 4699 4851 -1295 4474 175 18 28 chr10 27169530 27170818 -118418470 - L1MB4 LINE L1 0 6180 4907 438 190 30 30 chr10 27170822 27170922 -118418366 + L1M4 LINE L1 4844 4943 -1203 1172 129 21 5 chr10 27170954 27171147 -118418141 + THE1C LTR MaLR 121 316 -59 928 98 0 8 chr10 27171147 27171270 -118418018 + AluSq/x SINE Alu 1 122 -191 222 37 0 0 chr10 27171270 27171297 -118417991 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 509 61 0 0 chr10 27171297 27171363 -118417925 + THE1C LTR MaLR 308 373 -2 2406 112 0 0 chr10 27171419 27171731 -118417557 + AluSx SINE Alu 1 312 0 4016 215 45 15 chr10 27171752 27173495 -118415793 + L1MB5 LINE L1 4364 6165 -9 450 276 16 0 chr10 27173479 27173671 -118415617 + L1M4 LINE L1 5135 5329 -817 * 992 234 23 69 chr10 27173678 27174028 -118415260 + L1M4 LINE L1 16 349 -6193 13914 121 34 1 chr10 27174028 27176265 -118413023 + Tigger1 DNA MER2_type 1 2309 -109 1835 163 3 3 chr10 27176265 27176554 -118412734 - AluJo SINE Alu -13 299 11 15937 100 18 26 chr10 27176809 27179429 -118409859 - HERVH LTR ERV1 -5112 2601 1 2675 95 92 5 chr10 27179431 27179843 -118409445 - LTR7 LTR ERV1 -2 448 1 3263 231 96 34 chr10 27179843 27181316 -118407972 - L1MB4 LINE L1 -1907 4239 2675 295 133 100 0 chr10 27181322 27181382 -118407906 - MLT1B LTR MaLR 0 390 325 2221 118 10 0 chr10 27181382 27181688 -118407600 + AluSx SINE Alu 1 309 -3 445 169 52 0 chr10 27182072 27182149 -118407139 + MER2 DNA MER2_type 1 81 -264 1176 138 57 29 chr10 27182243 27182489 -118406799 + MER2 DNA MER2_type 93 345 0 2083 121 3 0 chr10 27182511 27182851 -118406437 + AluSq SINE Alu 1 341 0 2099 97 3 17 chr10 27183104 27183423 -118405865 - AluSq SINE Alu 0 315 1 1751 134 8 85 chr10 27184016 27184382 -118404906 - MER44D DNA MER2_type -1 608 1 2724 128 16 5 chr10 27184430 27184853 -118404435 + MSTA LTR MaLR 1 428 0 1436 131 29 48 chr10 27184903 27185310 -118403978 + MLT1C LTR MaLR 1 390 0 234 229 66 0 chr10 27185539 27185600 -118403688 - MIR3 SINE MIR -36 172 108 2314 114 48 11 chr10 27185763 27186114 -118403174 + THE1B LTR MaLR 1 364 0 2106 138 0 3 chr10 27186292 27186597 -118402691 + AluSc SINE Alu 1 304 -5 1583 208 54 3 chr10 27186736 27187107 -118402181 + MLT1B LTR MaLR 1 390 0 456 19 0 0 chr10 27187286 27187339 -118401949 + (CA)n Simple_repeat Simple_repeat 2 54 0 1277 183 28 20 chr10 27187812 27188277 -118401011 + MLT1D LTR MaLR 1 505 0 1458 135 15 132 chr10 27189320 27189661 -118399627 - AluJo SINE Alu -1 301 1 423 304 31 6 chr10 27190509 27190670 -118398618 + MIR SINE MIR 12 176 -86 330 73 0 0 chr10 27190796 27190837 -118398451 - MSTA LTR MaLR 0 426 386 2305 99 3 13 chr10 27190837 27191149 -118398139 + AluSc SINE Alu 1 309 0 1978 150 94 19 chr10 27191169 27191542 -118397746 - MSTA LTR MaLR -27 401 1 432 241 80 55 chr10 27192127 27192203 -118397085 - MIR SINE MIR -3 259 186 2001 115 45 3 chr10 27192203 27192489 -118396799 - AluSx SINE Alu -6 306 9 432 241 80 55 chr10 27192489 27192611 -118396677 - MIR SINE MIR -76 186 56 985 230 231 17 chr10 27192693 27192750 -118396538 - MLT1F1 LTR MaLR -8 559 516 2265 98 0 3 chr10 27192750 27193047 -118396241 + AluSc SINE Alu 4 299 -10 985 230 231 17 chr10 27193047 27193446 -118395842 - MLT1F1 LTR MaLR -51 516 1 531 128 47 0 chr10 27193618 27193704 -118395584 + FLAM_A SINE Alu 36 125 -17 1209 136 121 0 chr10 27193866 27194065 -118395223 - AluSg/x SINE Alu -5 305 83 2076 109 13 7 chr10 27194798 27195102 -118394186 + AluSx SINE Alu 1 306 -6 2280 110 0 0 chr10 27195755 27196055 -118393233 + AluSq SINE Alu 1 300 -13 1817 266 67 19 chr10 27196061 27196684 -118392604 - MER115 DNA AcHobo -40 653 1 252 219 0 41 chr10 27197033 27197106 -118392182 + L2 LINE L2 2794 2863 -451 218 122 14 54 chr10 27197286 27197360 -118391928 + (CCCCCG)n Simple_repeat Simple_repeat 5 75 0 5873 83 17 1 chr10 27197791 27198575 -118390713 - L1PA10 LINE L1 0 6168 5373 407 244 148 0 chr10 27198678 27198813 -118390475 - MLT1J LTR MaLR -349 162 8 23 0 0 0 chr10 27198950 27198973 -118390315 + AT_rich Low_complexity Low_complexity 1 23 0 517 286 84 10 chr10 27199187 27199390 -118389898 + MIR SINE MIR 32 249 -13 207 0 0 0 chr10 27199400 27199423 -118389865 + (CA)n Simple_repeat Simple_repeat 1 23 0 228 67 0 0 chr10 27199647 27199677 -118389611 + (T)n Simple_repeat Simple_repeat 1 30 0 190 240 20 20 chr10 27199768 27199818 -118389470 + MIR SINE MIR 71 120 -88 21 0 0 0 chr10 27199871 27199892 -118389396 + AT_rich Low_complexity Low_complexity 1 21 0 222 282 12 12 chr10 27200770 27200855 -118388433 - MIR SINE MIR -26 236 152 201 74 0 0 chr10 27201906 27201933 -118387355 + (CCTA)n Simple_repeat Simple_repeat 1 27 0 1715 164 4 7 chr10 27202060 27202334 -118386954 + AluJo SINE Alu 16 288 -24 1537 202 50 23 chr10 27202987 27203329 -118385959 + LTR53 LTR ERVL 3 353 -166 892 174 30 42 chr10 27203558 27203633 -118385655 - FRAM SINE Alu -149 163 89 8440 71 4 6 chr10 27203633 27204706 -118384582 + MER11C LTR ERVK 1 1071 0 892 174 30 42 chr10 27204706 27204797 -118384491 - FRAM SINE Alu -223 89 1 1043 111 0 0 chr10 27204876 27205011 -118384277 + AluSq/x SINE Alu 1 135 -178 2185 132 3 0 chr10 27205011 27205321 -118383967 + AluSx SINE Alu 1 311 -1 250 262 191 14 chr10 27205377 27205518 -118383770 + MER5A DNA MER1_type 1 166 -23 281 33 33 49 chr10 27206179 27206240 -118383048 + (TTTTA)n Simple_repeat Simple_repeat 2 61 0 1779 165 11 0 chr10 27206243 27206522 -118382766 - AluSx SINE Alu -30 282 1 208 239 0 0 chr10 27206561 27206607 -118382681 + MER5B DNA MER1_type 1 46 -132 238 219 0 0 chr10 27206643 27206684 -118382604 - MLT2B1 LTR ERVL 0 515 475 427 113 0 0 chr10 27206730 27206792 -118382496 + MADE1 DNA Mariner 1 62 -18 1484 236 92 7 chr10 27206799 27207232 -118382056 - MLT2B1 LTR ERVL -50 470 1 614 218 30 69 chr10 27207232 27207364 -118381924 + MIR SINE MIR 69 192 -70 1734 162 34 27 chr10 27207364 27207660 -118381628 + AluJb SINE Alu 1 298 -14 614 218 30 69 chr10 27207660 27207729 -118381559 + MIR SINE MIR 192 262 0 201 341 11 34 chr10 27207780 27207868 -118381420 - MER5A DNA MER1_type -98 91 6 804 321 84 26 chr10 27207906 27208479 -118380809 + Charlie7 DNA MER1_type 71 676 -1936 1525 156 4 42 chr10 27208520 27208783 -118380505 + AluJo SINE Alu 6 258 -54 315 0 0 0 chr10 27208787 27208822 -118380466 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 250 180 33 16 chr10 27209718 27209779 -118379509 - MER116 DNA Mariner 0 80 19 460 329 66 0 chr10 27210107 27210320 -118378968 + MARNA DNA Mariner 18 244 -342 1616 179 10 35 chr10 27211076 27211389 -118377899 - AluJo SINE Alu -7 305 1 674 209 8 8 chr10 27213913 27214047 -118375241 + AluSg/x SINE Alu 164 297 -15 1307 185 0 13 chr10 27214047 27214274 -118375014 + AluSx SINE Alu 1 224 -88 967 251 110 28 chr10 27214390 27214716 -118374572 - MLT1A1 LTR MaLR -12 353 1 739 288 88 23 chr10 27215258 27215644 -118373644 - LTR16C LTR ERVL -9 482 72 387 0 0 0 chr10 27216802 27216845 -118372443 + (A)n Simple_repeat Simple_repeat 1 43 0 392 254 45 30 chr10 27217568 27217702 -118371586 + MIR SINE MIR 109 244 -18 191 323 73 16 chr10 27218393 27218517 -118370771 + MER5A DNA MER1_type 40 170 -19 252 45 27 100 chr10 27218861 27218971 -118370317 + (TA)n Simple_repeat Simple_repeat 1 102 0 212 130 57 24 chr10 27219035 27219158 -118370130 + (TATAG)n Simple_repeat Simple_repeat 4 130 0 214 172 69 23 chr10 27219158 27219245 -118370043 + (CTATA)n Simple_repeat Simple_repeat 1 91 0 222 116 43 67 chr10 27219245 27219409 -118369879 + (TA)n Simple_repeat Simple_repeat 1 160 0 603 284 74 9 chr10 27219538 27219977 -118369311 - L2 LINE L2 -161 3152 2678 303 244 24 0 chr10 27220412 27220494 -118368794 + CT-rich Low_complexity Low_complexity 2 85 0 2094 194 35 30 chr10 27220656 27221119 -118368169 - MLT1D LTR MaLR -38 467 3 207 0 0 0 chr10 27221460 27221483 -118367805 + (A)n Simple_repeat Simple_repeat 1 23 0 321 278 19 28 chr10 27221618 27221726 -118367562 + MLT1G1 LTR MaLR 258 364 -231 2573 132 18 34 chr10 27223775 27223909 -118365379 - L1PA16 LINE L1 -13 6153 6018 2061 138 0 3 chr10 27223909 27224220 -118365068 - AluSq SINE Alu -3 310 1 2573 132 18 34 chr10 27224220 27224523 -118364765 - L1PA16 LINE L1 -148 6018 5723 899 296 157 14 chr10 27225069 27225854 -118363434 + L2 LINE L2 36 932 -2382 278 347 95 12 chr10 27226225 27226467 -118362821 - L2 LINE L2 -18 3254 2993 216 0 0 0 chr10 27227067 27227091 -118362197 + (TC)n Simple_repeat Simple_repeat 1 24 0 * 333 62 0 0 chr10 27227090 27227138 -118362150 + (CA)n Simple_repeat Simple_repeat 1 48 0 244 205 26 39 chr10 27227345 27227423 -118361865 + (CATATA)n Simple_repeat Simple_repeat 4 80 0 2369 149 41 12 chr10 27228598 27229014 -118360274 + MSTA LTR MaLR 1 428 0 1486 196 22 10 chr10 27229024 27229336 -118359952 + MLT1B LTR MaLR 1 316 -74 202 375 164 0 chr10 27230649 27230777 -118358511 - L2 LINE L2 -1 3271 3123 192 287 189 7 chr10 27230853 27230996 -118358292 - MIR3 SINE MIR -13 195 27 2499 84 55 3 chr10 27231027 27231371 -118357917 + THE1B LTR MaLR 3 364 0 864 238 14 19 chr10 27231827 27232037 -118357251 + MER63A DNA MER1_type 2 210 0 3665 100 22 0 chr10 27232241 27232742 -118356546 + MER75 DNA T2_type 1 512 -2 1314 207 78 15 chr10 27233085 27233141 -118356147 + MLT1A1 LTR MaLR 11 62 -303 4281 80 2 18 chr10 27233141 27233704 -118355584 - MER41A LTR ERV1 0 554 1 1314 207 78 15 chr10 27233704 27233981 -118355307 + MLT1A1 LTR MaLR 62 365 0 3021 120 87 4 chr10 27234156 27234616 -118354672 - MER41E LTR ERV1 0 512 15 2782 174 29 57 chr10 27235352 27235968 -118353320 + LTR9 LTR ERV1 14 612 0 183 156 0 0 chr10 27236347 27236379 -118352909 + (TG)n Simple_repeat Simple_repeat 2 33 0 186 311 155 0 chr10 27239094 27239197 -118350091 + MIR3 SINE MIR 84 202 -6 287 316 76 13 chr10 27239746 27239904 -118349384 - MIR SINE MIR -47 215 48 1578 153 96 3 chr10 27240006 27240288 -118349000 + AluSq SINE Alu 1 308 -5 1146 60 0 78 chr10 27240346 27240512 -118348776 + AluY SINE Alu 1 153 -158 2685 66 0 6 chr10 27240514 27240863 -118348425 - LTR7 LTR ERV1 -2 448 102 1792 94 64 0 chr10 27240865 27241131 -118348157 - HERVH LTR ERV1 -109 7604 7322 1349 117 42 9 chr10 27241129 27241342 -118347946 - HERVH LTR ERV1 -1894 5819 5600 * 3923 145 14 3 chr10 27241343 27241998 -118347290 - HERVH LTR ERV1 -2564 5149 4488 3198 117 0 6 chr10 27242000 27242505 -118346783 - HERVH LTR ERV1 -3720 3993 3492 867 140 7 0 chr10 27242495 27242645 -118346643 - HERVH LTR ERV1 -4423 3290 3140 * 9408 100 10 8 chr10 27242639 27244085 -118345203 - HERVH LTR ERV1 -4726 2987 1540 8102 169 60 21 chr10 27244101 27245992 -118343296 - HERVH LTR ERV1 -4819 1835 1 3188 62 0 70 chr10 27245994 27246476 -118342812 - LTR7 LTR ERV1 -2 448 1 919 117 14 0 chr10 27246499 27246644 -118342644 + AluY SINE Alu 157 303 -8 197 276 31 61 chr10 27246693 27246791 -118342497 + L2 LINE L2 3125 3219 -94 241 195 0 0 chr10 27246792 27246833 -118342455 + MER63 DNA MER1_type 1 41 -395 264 222 222 0 chr10 27246958 27247039 -118342249 + L2 LINE L2 3212 3310 -3 4297 152 19 24 chr10 27247086 27247236 -118342052 + LTR39 LTR ERV1 1 150 -633 1629 227 44 75 chr10 27247236 27247867 -118341421 - LTR9 LTR ERV1 0 612 1 4297 152 19 24 chr10 27247867 27248495 -118340793 + LTR39 LTR ERV1 150 775 -8 187 347 0 20 chr10 27249009 27249058 -118340230 + L2 LINE L2 3136 3183 -89 685 273 108 0 chr10 27249388 27249564 -118339724 + MIR SINE MIR 17 211 -51 1744 171 0 54 chr10 27249570 27249886 -118339402 + AluJb SINE Alu 1 299 -13 392 352 51 15 chr10 27250342 27250538 -118338750 + MIR3 SINE MIR 1 203 -5 1591 208 0 16 chr10 27250603 27250906 -118338382 - AluJo SINE Alu -14 298 1 2433 136 62 5 chr10 27251424 27251829 -118337459 - MSTA LTR MaLR 0 428 1 351 271 41 41 chr10 27251965 27252135 -118337153 - L1ME4a LINE L1 -1 6120 5951 1649 154 3 28 chr10 27252159 27252472 -118336816 - AluJo SINE Alu 0 310 5 2336 110 0 0 chr10 27252510 27252820 -118336468 - AluSx SINE Alu -2 310 1 3971 157 27 10 chr10 27252969 27253663 -118335625 - MER39 LTR ERV1 -1 706 1 637 261 10 24 chr10 27253663 27253861 -118335427 - L1ME4a LINE L1 -312 5809 5613 2251 115 3 10 chr10 27255933 27256247 -118333041 - AluSx SINE Alu 0 312 1 2275 91 7 0 chr10 27257283 27257580 -118331708 - AluY SINE Alu -12 299 1 1886 128 14 27 chr10 27258279 27258575 -118330713 + AluSq SINE Alu 13 304 -9 711 129 39 7 chr10 27258589 27258744 -118330544 + GA-rich Low_complexity Low_complexity 1 160 0 372 321 68 0 chr10 27259406 27259568 -118329720 - MER5A DNA MER1_type -14 175 3 421 268 71 0 chr10 27260006 27260133 -118329155 - MIR SINE MIR -98 164 29 2266 128 3 0 chr10 27260244 27260556 -118328732 - AluSq SINE Alu 0 313 1 1651 174 24 27 chr10 27262129 27262457 -118326831 - AluJo SINE Alu 0 332 6 342 266 21 11 chr10 27262866 27262960 -118326328 + GA-rich Low_complexity Low_complexity 2 96 0 2100 166 41 37 chr10 27263026 27263109 -118326179 - L1MA4 LINE L1 -10 6290 6209 1710 153 7 24 chr10 27263109 27263397 -118325891 + AluJo SINE Alu 14 296 -16 2100 166 41 37 chr10 27263397 27263777 -118325511 - L1MA4 LINE L1 -91 6209 5825 222 227 0 0 chr10 27264436 27264480 -118324808 + (CATATA)n Simple_repeat Simple_repeat 2 45 0 194 253 95 53 chr10 27264484 27264579 -118324709 - L2 LINE L2 -5 3267 3169 233 217 0 0 chr10 27264787 27264833 -118324455 + (TGAA)n Simple_repeat Simple_repeat 3 48 0 2287 102 0 0 chr10 27264988 27265282 -118324006 + AluSx SINE Alu 1 294 -18 1144 203 72 51 chr10 27265406 27265834 -118323454 - LTR56 LTR ERV1 0 445 9 1984 155 49 45 chr10 27266851 27267296 -118321992 - MER67A LTR ERV1 0 543 97 2925 74 14 61 chr10 27267316 27267761 -118321527 + L1PA10 LINE L1 5730 6153 -15 721 125 0 0 chr10 27267795 27267907 -118321381 - MER67A LTR ERV1 -431 112 1 685 353 12 4 chr10 27267927 27268185 -118321103 + MIR SINE MIR 3 262 0 214 127 0 36 chr10 27268565 27268620 -118320668 + (CAAAG)n Simple_repeat Simple_repeat 2 54 0 987 305 27 14 chr10 27268628 27268999 -118320289 - MLT1I LTR MaLR -8 401 26 5128 124 17 20 chr10 27269018 27269899 -118319389 - L1PA15 LINE L1 0 6165 5288 318 26 0 0 chr10 27270103 27270142 -118319146 + (CA)n Simple_repeat Simple_repeat 2 40 0 307 286 138 42 chr10 27270232 27270515 -118318773 + HAL1b LINE L1 505 814 -534 206 291 0 0 chr10 27270558 27270613 -118318675 - MIR SINE MIR -16 246 192 30 97 0 0 chr10 27270720 27270813 -118318475 + AT_rich Low_complexity Low_complexity 1 93 0 1624 193 3 32 chr10 27270815 27271131 -118318157 - AluJo SINE Alu -5 307 1 1233 194 41 116 chr10 27271153 27271833 -118317455 + Zaphod DNA AcHobo 816 1444 -2587 272 258 15 0 chr10 27271831 27271897 -118317391 + Zaphod DNA AcHobo 3964 4030 -1 * 1453 28 4 173 chr10 27272036 27272290 -118316998 + L1PA5 LINE L1 5935 6145 -9 21 0 0 0 chr10 27272665 27272686 -118316602 + AT_rich Low_complexity Low_complexity 1 21 0 181 198 22 0 chr10 27272898 27272989 -118316299 + A-rich Low_complexity Low_complexity 1 93 0 454 281 57 46 chr10 27273279 27273542 -118315746 + L1MC4a LINE L1 3243 3508 -2638 227 123 41 14 chr10 27273692 27273765 -118315523 + (TA)n Simple_repeat Simple_repeat 2 76 0 454 282 93 46 chr10 27273846 27274343 -118314945 + L1MC4a LINE L1 3731 4250 -1896 307 185 46 15 chr10 27274521 27274586 -118314702 - MER20 DNA MER1_type -152 67 1 390 286 71 0 chr10 27274586 27274740 -118314548 + L1MC4a LINE L1 5737 5901 -1907 21 36 0 0 chr10 27275823 27275851 -118313437 + AT_rich Low_complexity Low_complexity 1 28 0 1817 108 46 26 chr10 27276584 27276680 -118312608 + Tigger2a DNA MER2_type 1 94 -2614 204 40 0 0 chr10 27276680 27276705 -118312583 + (TCC)n Simple_repeat Simple_repeat 2 26 0 1817 108 46 26 chr10 27276705 27276914 -118312374 + Tigger2a DNA MER2_type 94 312 -122 3168 131 43 8 chr10 27276914 27277045 -118312243 - MER41C LTR ERV1 0 554 429 2086 134 47 33 chr10 27277045 27277404 -118311884 + THE1B LTR MaLR 1 364 0 3168 131 43 8 chr10 27277404 27277807 -118311481 - MER41C LTR ERV1 -125 429 1 248 146 0 0 chr10 27277807 27277846 -118311442 + Tigger2a DNA MER2_type 309 347 -87 2195 84 3 0 chr10 27277846 27278131 -118311157 - AluSx SINE Alu -26 286 1 248 252 117 9 chr10 27278270 27278484 -118310804 - L1M4 LINE L1 -2949 3197 2961 427 321 17 7 chr10 27278848 27279144 -118310144 - L1M4 LINE L1 -3584 2562 2264 24 32 0 0 chr10 27279236 27279267 -118310021 + AT_rich Low_complexity Low_complexity 1 31 0 884 234 24 19 chr10 27279435 27279644 -118309644 - MIR SINE MIR 0 262 53 513 319 42 25 chr10 27279648 27279933 -118309355 + L1M4 LINE L1 5023 5312 -834 2470 53 0 3 chr10 27280859 27281158 -118308130 + AluY SINE Alu 1 298 -13 1712 158 3 7 chr10 27281376 27281684 -118307604 - AluSq SINE Alu 0 307 1 237 307 13 0 chr10 27283150 27283225 -118306063 - L3 LINE CR1 -1 1576 1501 233 222 16 16 chr10 27283249 27283312 -118305976 + CT-rich Low_complexity Low_complexity 2 64 0 270 0 0 0 chr10 27283312 27283342 -118305946 + (CA)n Simple_repeat Simple_repeat 1 30 0 227 332 173 29 chr10 27283346 27283554 -118305734 - L3 LINE CR1 -222 1355 1118 551 136 117 0 chr10 27284179 27284282 -118305006 - 5S rRNA rRNA -6 115 1 321 294 137 33 chr10 27284423 27284576 -118304712 - L2 LINE L2 -2 3270 3102 193 323 187 59 chr10 27284952 27285011 -118304277 - L2 LINE L2 -638 2676 2626 1965 153 7 17 chr10 27285011 27285311 -118303977 + AluJo SINE Alu 1 297 -15 193 323 187 59 chr10 27285311 27285626 -118303662 - L2 LINE L2 -688 2626 2254 307 346 43 14 chr10 27287764 27287972 -118301316 + MIR SINE MIR 8 221 -41 186 282 0 0 chr10 27288732 27288771 -118300517 + MER5B DNA MER1_type 11 49 -129 370 328 8 8 chr10 27288802 27288927 -118300361 + MER5B DNA MER1_type 52 176 -2 794 286 54 41 chr10 27289142 27289684 -118299604 + L2 LINE L2 2733 3276 -37 425 125 0 0 chr10 27289727 27289791 -118299497 - U6 snRNA snRNA -43 64 1 23 0 0 0 chr10 27290013 27290036 -118299252 + AT_rich Low_complexity Low_complexity 1 23 0 2155 114 0 3 chr10 27290036 27290352 -118298936 - L1PB1 LINE L1 -1 6150 5836 489 76 0 0 chr10 27291893 27291959 -118297329 + (TG)n Simple_repeat Simple_repeat 2 67 0 2172 87 18 0 chr10 27291962 27292239 -118297049 - AluSq SINE Alu -31 282 1 1089 140 95 20 chr10 27292462 27292662 -118296626 - AluJo SINE Alu -12 300 86 259 348 62 18 chr10 27292983 27293095 -118296193 - MIR SINE MIR -73 135 19 2177 128 0 0 chr10 27293149 27293453 -118295835 - AluSx SINE Alu -8 304 1 244 255 0 0 chr10 27293903 27293950 -118295338 - MER91 DNA MER1_type -76 64 18 859 135 0 0 chr10 27293990 27294116 -118295172 - FLAM_C SINE Alu -6 127 2 335 275 13 0 chr10 27294176 27294262 -118295026 + MIR SINE MIR 57 143 -65 2006 161 105 10 chr10 27294349 27294740 -118294548 - MSTA LTR MaLR 0 428 1 761 187 13 20 chr10 27295578 27295728 -118293560 + MIR SINE MIR 41 189 -73 1981 143 3 13 chr10 27296497 27296811 -118292477 + AluY SINE Alu 1 311 0 9647 179 31 21 chr10 27296855 27298812 -118290476 - ERVL LTR ERVL -338 5426 3451 2881 206 43 22 chr10 27298957 27299559 -118289729 - ERVL LTR ERVL -4274 1490 902 3531 195 26 83 chr10 27299559 27300586 -118288702 + LTR5 LTR ERVK 1 969 0 1972 126 55 30 chr10 27300586 27300952 -118288336 - THE1C LTR MaLR 0 375 1 2881 206 43 22 chr10 27300952 27301018 -118288270 - ERVL LTR ERVL -4861 903 807 726 247 38 4 chr10 27301050 27301285 -118288003 + L1ME3A LINE L1 5758 6000 -170 493 120 27 0 chr10 27301815 27301890 -118287398 + AluSg/x SINE Alu 206 282 -30 180 0 0 0 chr10 27301898 27301918 -118287370 + (TAAA)n Simple_repeat Simple_repeat 3 22 0 1791 126 66 3 chr10 27302134 27302420 -118286868 + AluSx SINE Alu 1 304 -8 3290 149 8 13 chr10 27303060 27303590 -118285698 - MER1A DNA MER1_type 0 527 1 838 205 13 0 chr10 27303674 27303830 -118285458 - FRAM SINE Alu -17 159 2 202 241 74 0 chr10 27304500 27304554 -118284734 - MIR SINE MIR -88 174 117 2381 53 0 0 chr10 27304588 27304927 -118284361 - AluY SINE Alu 0 339 1 278 267 12 12 chr10 27306280 27306366 -118282922 - MLT1I LTR MaLR 0 409 324 380 324 116 0 chr10 27306400 27306616 -118282672 - MLT1I LTR MaLR -152 257 17 395 128 0 13 chr10 27307072 27307150 -118282138 + (TTCCC)n Simple_repeat Simple_repeat 1 77 0 1636 85 5 0 chr10 27307697 27307909 -118281379 - AluSc SINE Alu -96 213 1 25 0 0 0 chr10 27308333 27308358 -118280930 + AT_rich Low_complexity Low_complexity 1 25 0 447 35 0 0 chr10 27310921 27310978 -118278310 + (CA)n Simple_repeat Simple_repeat 2 58 0 200 238 0 0 chr10 27311408 27311450 -118277838 + (TAAA)n Simple_repeat Simple_repeat 1 42 0 506 302 81 48 chr10 27311897 27312583 -118276705 + L1ME4a LINE L1 5317 6030 -91 375 233 175 0 chr10 27312583 27312686 -118276602 - FLAM_A SINE Alu -12 121 1 506 302 81 48 chr10 27312686 27312743 -118276545 + L1ME4a LINE L1 6030 6084 -37 1958 171 12 30 chr10 27312783 27313186 -118276102 + L1MA4A LINE L1 5902 6297 -6 23 54 0 0 chr10 27314566 27314603 -118274685 + AT_rich Low_complexity Low_complexity 1 37 0 617 144 126 27 chr10 27318273 27318384 -118270904 + FLAM_C SINE Alu 1 122 -21 1162 178 0 11 chr10 27318453 27318644 -118270644 + AluJo SINE Alu 95 283 -29 421 328 125 32 chr10 27319156 27319851 -118269437 + L1M4 LINE L1 2860 3619 -2527 271 146 0 0 chr10 27319944 27319985 -118269303 + Alu SINE Alu 1 41 -259 1629 133 4 0 chr10 27319985 27320218 -118269070 + AluSg/x SINE Alu 72 305 -5 428 295 125 57 chr10 27320291 27320732 -118268556 + L1M4 LINE L1 3807 4277 -1869 303 313 24 0 chr10 27322101 27322184 -118267104 + polypurine Low_complexity Low_complexity 1 85 0 393 129 0 0 chr10 27322234 27322304 -118266984 + (TTCCC)n Simple_repeat Simple_repeat 5 74 0 1365 156 107 42 chr10 27322310 27322599 -118266689 - AluJo SINE Alu -2 310 3 37 62 0 0 chr10 27322993 27323058 -118266230 + AT_rich Low_complexity Low_complexity 1 65 0 580 276 112 30 chr10 27323116 27323348 -118265940 - MIR SINE MIR 0 262 12 210 105 0 0 chr10 27323561 27323599 -118265689 + (T)n Simple_repeat Simple_repeat 1 38 0 207 0 0 0 chr10 27323642 27323665 -118265623 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 595 90 0 22 chr10 27323665 27323749 -118265539 - L1PA11 LINE L1 -11 6163 6081 1558 179 3 27 chr10 27323749 27324046 -118265242 - AluJo SINE Alu -22 290 1 21 0 0 0 chr10 27324599 27324620 -118264668 + AT_rich Low_complexity Low_complexity 1 21 0 900 197 0 13 chr10 27324896 27325048 -118264240 + FRAM SINE Alu 1 150 -16 330 250 95 60 chr10 27325087 27325228 -118264060 + L1MC4 LINE L1 7836 7987 -55 2150 122 42 31 chr10 27325228 27325588 -118263700 - THE1B LTR MaLR 0 364 1 330 250 95 60 chr10 27325588 27325646 -118263642 + L1MC4 LINE L1 7987 8042 0 198 0 0 0 chr10 27325748 27325770 -118263518 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 2050 133 3 0 chr10 27325773 27326058 -118263230 - AluSx SINE Alu -26 286 1 2469 67 0 3 chr10 27326301 27326613 -118262675 - AluY SINE Alu 0 311 1 529 200 50 0 chr10 27327864 27327984 -118261304 + MLT1D LTR MaLR 31 156 -349 228 93 23 0 chr10 27327987 27328030 -118261258 - MLT2A1 LTR ERVL -400 44 1 209 216 20 0 chr10 27328176 27328227 -118261061 + A-rich Low_complexity Low_complexity 5 56 0 1172 190 28 14 chr10 27328289 27328505 -118260783 - AluJb SINE Alu -35 277 59 608 151 0 0 chr10 27328507 27328600 -118260688 - AluJ/FLAM SINE Alu -219 93 1 661 224 174 20 chr10 27329320 27329516 -118259772 + MIR SINE MIR 13 238 -24 1740 212 94 113 chr10 27329773 27329861 -118259427 + MER97a DNA MER1_type? 9 97 -797 2354 91 0 3 chr10 27329861 27330157 -118259131 + AluY SINE Alu 1 295 -16 1740 212 94 113 chr10 27330157 27330238 -118259050 + MER97a DNA MER1_type? 97 178 -716 652 188 31 23 chr10 27330238 27330366 -118258922 + FLAM_A SINE Alu 5 133 0 1740 212 94 113 chr10 27330366 27331081 -118258207 + MER97a DNA MER1_type? 178 877 -17 2787 85 0 11 chr10 27331685 27332051 -118257237 + THE1B LTR MaLR 3 364 0 2078 154 0 0 chr10 27332542 27332848 -118256440 - AluSx SINE Alu -5 307 2 371 265 112 70 chr10 27332895 27333110 -118256178 - HAL1 LINE L1 -3 2504 2281 307 164 16 0 chr10 27333190 27333251 -118256037 - HAL1 LINE L1 -1166 1341 1280 2001 145 7 0 chr10 27333253 27333550 -118255738 - AluSq SINE Alu -13 300 2 24 32 0 0 chr10 27333557 27333588 -118255700 + AT_rich Low_complexity Low_complexity 1 31 0 888 92 33 0 chr10 27333662 27333782 -118255506 - AluSq/x SINE Alu -188 124 1 475 261 139 12 chr10 27333782 27333947 -118255341 - HAL1 LINE L1 -1220 1287 1102 257 260 0 0 chr10 27334729 27334802 -118254486 - HAL1 LINE L1 -826 1681 1609 308 270 81 45 chr10 27335002 27335113 -118254175 - HAL1 LINE L1 -1146 1361 1247 22 70 0 0 chr10 27335114 27335157 -118254131 + AT_rich Low_complexity Low_complexity 1 43 0 358 309 138 4 chr10 27335157 27335403 -118253885 + L1M4 LINE L1 4316 4594 -1552 261 191 29 0 chr10 27335592 27335660 -118253628 - L1M4 LINE L1 -994 5152 5083 411 32 81 0 chr10 27335663 27335725 -118253563 + MER41A LTR ERV1 400 466 -88 5624 213 35 62 chr10 27335761 27336376 -118252912 - L1M4 LINE L1 -1053 5093 4463 507 230 0 0 chr10 27336376 27336463 -118252825 - AluJ/FLAM SINE Alu -225 87 1 5624 213 35 62 chr10 27336463 27337525 -118251763 - L1M4 LINE L1 -1683 4463 3378 240 308 39 39 chr10 27338056 27338134 -118251154 - L2 LINE L2 0 3272 3195 2219 123 0 7 chr10 27338595 27338904 -118250384 - AluSg SINE Alu -3 307 1 403 278 26 92 chr10 27338905 27339202 -118250086 - L1MEc LINE L1 -975 1601 1411 5056 56 0 0 chr10 27339400 27340030 -118249258 + L1PA5 LINE L1 5525 6154 0 21 0 0 0 chr10 27340071 27340092 -118249196 + AT_rich Low_complexity Low_complexity 1 21 0 834 204 0 0 chr10 27340116 27340263 -118249025 + AluJb SINE Alu 137 283 -29 1951 131 3 13 chr10 27340356 27340662 -118248626 - AluSx SINE Alu -9 303 1 490 242 70 112 chr10 27342067 27342467 -118246821 - L1MC4 LINE L1 -21 8021 7640 1420 169 118 14 chr10 27342467 27342746 -118246542 - AluSg1 SINE Alu -1 308 1 490 242 70 112 chr10 27342746 27342791 -118246497 - L1MC4 LINE L1 -402 7640 7595 2053 135 0 0 chr10 27343339 27343635 -118245653 + AluY SINE Alu 2 297 -14 300 302 35 17 chr10 27343789 27343905 -118245383 - MIR SINE MIR -137 125 8 1375 191 64 0 chr10 27344496 27344747 -118244541 + Tigger7 DNA MER2_type 1 267 -466 562 124 31 21 chr10 27344774 27344871 -118244417 + MER4A LTR ERV1 1 98 -566 1756 119 182 27 chr10 27344871 27345206 -118244082 + MER4A LTR ERV1 261 647 -17 1038 176 32 68 chr10 27345814 27346035 -118243253 - MER20 DNA MER1_type 0 219 7 2517 126 22 0 chr10 27347777 27348133 -118241155 + THE1B LTR MaLR 1 364 0 545 193 7 0 chr10 27348133 27348268 -118241020 + CT-rich Low_complexity Low_complexity 3 138 0 583 317 16 20 chr10 27348274 27348577 -118240711 + MER39 LTR ERV1 237 538 -169 721 55 0 28 chr10 27350181 27350290 -118238998 + (TTCC)n Simple_repeat Simple_repeat 1 106 0 364 271 52 0 chr10 27350302 27350398 -118238890 - L2 LINE L2 -24 3289 3189 340 187 0 40 chr10 27350825 27350881 -118238407 + MADE1 DNA Mariner 1 55 -25 2252 103 10 0 chr10 27350881 27351181 -118238107 + AluSx SINE Alu 3 305 -7 340 187 0 40 chr10 27351181 27351199 -118238089 + MADE1 DNA Mariner 55 72 -8 228 200 11 21 chr10 27352283 27352378 -118236910 - MER5C DNA MER1_type -59 265 172 827 209 0 0 chr10 27352399 27352538 -118236750 + AluJb SINE Alu 135 273 -39 1574 222 60 21 chr10 27352569 27353042 -118236246 - MER39 LTR ERV1 0 707 11 248 182 169 0 chr10 27353051 27353128 -118236160 - MER5C DNA MER1_type -205 119 30 2960 117 30 26 chr10 27353276 27353606 -118235682 - MER4C LTR ERV1 0 465 131 1943 141 32 0 chr10 27353606 27353889 -118235399 - AluJb SINE Alu -20 292 1 2960 117 30 26 chr10 27353889 27354020 -118235268 - MER4C LTR ERV1 -334 131 2 255 339 14 26 chr10 27355076 27355228 -118234060 + MIR3 SINE MIR 1 149 -72 1990 150 3 3 chr10 27355241 27355541 -118233747 + AluJb SINE Alu 1 300 -12 1001 35 17 0 chr10 27356587 27356702 -118232586 - L1PA6 LINE L1 -7 6147 6031 258 35 0 0 chr10 27356706 27356735 -118232553 + L1P LINE L1 3557 3585 -2561 7536 44 33 0 chr10 27357172 27358102 -118231186 - L1PA7 LINE L1 -7 6147 5215 198 0 0 0 chr10 27358580 27358602 -118230686 + (TAAAA)n Simple_repeat Simple_repeat 5 26 0 250 305 37 0 chr10 27358678 27358760 -118230528 + MIR SINE MIR 161 245 -17 625 200 8 8 chr10 27359176 27359344 -118229944 - AluSc SINE Alu 0 349 182 1313 156 39 68 chr10 27359777 27360085 -118229203 + ERVL-D LTR ERVL 5459 5757 -7 1582 202 78 36 chr10 27360085 27360472 -118228816 + MLT2D LTR ERVL 1 403 -11 600 330 117 22 chr10 27360796 27361445 -118227843 - L1MEc LINE L1 -3306 2909 2199 1832 161 3 10 chr10 27362540 27362844 -118226444 + AluJb SINE Alu 1 302 -10 713 118 0 0 chr10 27364173 27364266 -118225022 + AluY SINE Alu 193 285 -26 821 270 54 0 chr10 27364270 27364492 -118224796 - MIR SINE MIR 0 262 29 618 156 0 0 chr10 27364571 27364661 -118224627 + AluJ/FLAM SINE Alu 2 91 -221 400 304 60 61 chr10 27364672 27365009 -118224279 - MLT1J LTR MaLR -82 533 115 2132 133 3 7 chr10 27365026 27365335 -118223953 + AluSg SINE Alu 1 308 -2 263 319 76 0 chr10 27365395 27365514 -118223774 - L1MEc LINE L1 -5724 672 545 326 398 14 0 chr10 27365589 27365800 -118223488 - L1MEc LINE L1 -6012 384 171 1652 199 67 105 chr10 27366161 27366816 -118222472 - LTR1B LTR ERV1 0 826 197 * 1762 183 3 6 chr10 27366811 27367133 -118222155 - LTR1B LTR ERV1 -505 321 1 23 54 0 0 chr10 27367144 27367181 -118222107 + AT_rich Low_complexity Low_complexity 1 37 0 216 67 0 0 chr10 27367238 27367268 -118222020 + (TTTTTG)n Simple_repeat Simple_repeat 3 32 0 673 255 109 5 chr10 27368386 27368570 -118220718 - MIR SINE MIR -6 256 54 328 390 17 0 chr10 27368720 27368838 -118220450 - L2 LINE L2 -10 3262 3143 628 248 0 0 chr10 27369025 27369146 -118220142 + FLAM_A SINE Alu 15 135 -7 274 300 20 67 chr10 27369612 27369762 -118219526 - MIR SINE MIR -74 188 46 2004 141 3 0 chr10 27369855 27370138 -118219150 + AluSx SINE Alu 1 284 -28 350 317 43 24 chr10 27370581 27370745 -118218543 + MIR SINE MIR 85 251 -11 1366 180 77 23 chr10 27372360 27372660 -118216628 + L1MC4 LINE L1 6782 7097 -945 2193 161 5 72 chr10 27372674 27373121 -118216167 + LTR9 LTR ERV1 1 417 -195 485 92 0 0 chr10 27373181 27373246 -118216042 - Alu SINE Alu -8 302 238 410 170 57 85 chr10 27373246 27373352 -118215936 + LTR9 LTR ERV1 515 779 0 2176 253 40 21 chr10 27373360 27373393 -118215895 + L1MC4 LINE L1 7266 7297 -745 4359 155 66 32 chr10 27373393 27374149 -118215139 - LTR39 LTR ERV1 -1 782 1 2176 253 40 21 chr10 27374149 27374786 -118214502 + L1MC4 LINE L1 7297 8042 0 345 314 175 11 chr10 27374924 27375198 -118214090 + L1ME4a LINE L1 5738 6056 -65 1334 233 149 20 chr10 27375428 27375918 -118213370 + LTR48B LTR ERV1 92 644 0 3000 83 92 2 chr10 27376980 27377391 -118211897 - LTR7 LTR ERV1 -2 448 1 366 284 117 12 chr10 27377411 27377573 -118211715 + MIR SINE MIR 84 262 0 856 300 163 33 chr10 27377722 27378581 -118210707 + L2 LINE L2 2358 3308 -5 668 251 70 70 chr10 27379145 27379444 -118209844 + LTR16A LTR ERVL 123 421 -29 2172 122 58 50 chr10 27379461 27379822 -118209466 + THE1B LTR MaLR 1 364 0 1823 160 39 15 chr10 27380144 27380475 -118208813 + MER44D DNA MER2_type 1 609 0 2396 125 36 23 chr10 27380490 27380875 -118208413 + MLT1B LTR MaLR 1 390 0 477 0 0 0 chr10 27381565 27381618 -118207670 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 34 24 0 0 chr10 27381618 27381659 -118207629 + AT_rich Low_complexity Low_complexity 1 41 0 5444 135 34 23 chr10 27382472 27383334 -118205954 - MER4D LTR ERV1 0 872 2 2754 117 0 14 chr10 27383668 27384037 -118205251 + THE1B LTR MaLR 1 364 0 10679 114 40 34 chr10 27384037 27385608 -118203680 + THE1B-int LTR MaLR 1 1580 0 2683 117 17 6 chr10 27385608 27385968 -118203320 + THE1B LTR MaLR 1 364 0 801 164 43 0 chr10 27386788 27386928 -118202360 - FRAM SINE Alu -30 146 1 2171 137 0 0 chr10 27386968 27387267 -118202021 - AluSx SINE Alu -13 299 1 188 268 0 0 chr10 27388098 27388139 -118201149 + MIR SINE MIR 196 236 -26 693 152 0 0 chr10 27388290 27388382 -118200906 + AluJ/FLAM SINE Alu 4 95 -217 403 241 12 0 chr10 27388382 27388544 -118200744 + (TA)n Simple_repeat Simple_repeat 1 164 0 2293 177 26 0 chr10 27388710 27389099 -118200189 - Tigger1 DNA MER2_type -2019 399 1 1046 155 0 0 chr10 27390420 27390581 -118198707 + FRAM SINE Alu 14 174 -2 3738 88 15 0 chr10 27390762 27391241 -118198047 + LTR19A LTR ERV1 1 486 0 2149 121 0 7 chr10 27392816 27393122 -118196166 - AluSx SINE Alu -8 304 1 236 314 0 0 chr10 27393240 27393326 -118195962 - L1MC4 LINE L1 -1342 6700 6615 * 294 269 0 0 chr10 27393254 27393332 -118195956 + (TA)n Simple_repeat Simple_repeat 1 78 0 207 0 0 0 chr10 27393380 27393403 -118195885 + (TATG)n Simple_repeat Simple_repeat 4 26 0 289 0 0 0 chr10 27393776 27393808 -118195480 + (TTTA)n Simple_repeat Simple_repeat 2 156 0 522 73 29 0 chr10 27393808 27393876 -118195412 - AluSg/x SINE Alu -29 283 214 1035 105 0 0 chr10 27393902 27394035 -118195253 - AluSq/x SINE Alu -180 133 1 606 178 10 0 chr10 27394647 27394748 -118194540 - U4 snRNA snRNA -1 144 43 477 128 0 96 chr10 27394795 27394889 -118194399 - FRAM SINE Alu -19 157 73 348 183 110 0 chr10 27395038 27395120 -118194168 + MIR SINE MIR 117 207 -55 2172 107 7 0 chr10 27395300 27395599 -118193689 + AluY SINE Alu 1 301 -10 3911 138 12 49 chr10 27395603 27396361 -118192927 + L1MB3 LINE L1 5444 6173 -10 352 284 0 0 chr10 27396551 27396639 -118192649 + MIR SINE MIR 60 147 -115 2256 87 0 3 chr10 27396691 27396991 -118192297 + AluY SINE Alu 1 299 -12 1587 158 3 76 chr10 27396988 27397291 -118191997 - AluJo SINE Alu -31 281 1 * 224 287 46 11 chr10 27397296 27397383 -118191905 + MIR SINE MIR 167 256 -6 324 65 0 0 chr10 27399372 27399418 -118189870 + MADE1 DNA Mariner 1 46 -34 552 333 10 10 chr10 27399599 27399803 -118189485 - MIR SINE MIR 0 262 59 2769 159 62 18 chr10 27399882 27400380 -118188908 + MLT2B1 LTR ERVL 1 520 0 397 286 28 136 chr10 27401351 27401520 -118187768 + L2 LINE L2 2998 3111 -202 2248 94 0 20 chr10 27401520 27401817 -118187471 + AluSx SINE Alu 2 292 -20 397 286 28 136 chr10 27401817 27402000 -118187288 + L2 LINE L2 3111 3312 -1 289 317 96 36 chr10 27402247 27402414 -118186874 + MIR3 SINE MIR 4 180 -28 616 163 0 68 chr10 27402622 27402769 -118186519 - FLAM_C SINE Alu 0 143 7 2484 74 0 0 chr10 27402782 27403078 -118186210 - AluSg SINE Alu -14 296 1 1779 154 27 10 chr10 27403104 27403403 -118185885 - AluJb SINE Alu -8 304 1 185 328 45 0 chr10 27404296 27404363 -118184925 - MIR SINE MIR -144 118 49 * 226 213 66 16 chr10 27404361 27404422 -118184866 + L2 LINE L2 3250 3313 0 206 253 181 12 chr10 27404787 27404870 -118184418 + MIR SINE MIR 74 170 -92 656 140 221 15 chr10 27405401 27405537 -118183751 - AluSg/x SINE Alu -12 300 137 602 148 98 25 chr10 27405609 27405731 -118183557 + FLAM_A SINE Alu 11 141 -1 1812 176 83 13 chr10 27405734 27406235 -118183053 + LTR65 LTR ERV1 53 669 0 2287 89 3 13 chr10 27406326 27406628 -118182660 + AluSc SINE Alu 1 299 -10 1801 169 128 58 chr10 27406628 27407112 -118182176 - Charlie1b DNA MER1_type -5 518 1 2443 52 0 19 chr10 27407614 27407921 -118181367 - AluY SINE Alu -10 301 1 23 54 0 0 chr10 27410517 27410554 -118178734 + AT_rich Low_complexity Low_complexity 1 37 0 339 329 7 27 chr10 27411343 27411489 -118177799 + MIR SINE MIR 106 248 -14 629 289 42 71 chr10 27411632 27411940 -118177348 + MER102b DNA MER1_type 37 335 -6 203 238 12 75 chr10 27412068 27412148 -118177140 - MIR SINE MIR -68 194 120 346 289 233 8 chr10 27412844 27413097 -118176191 - L2 LINE L2 -339 2975 2666 492 268 187 29 chr10 27413951 27414857 -118174431 - L1MEd LINE L1 -3044 3496 2440 561 279 97 22 chr10 27415181 27415624 -118173664 - L1MEd LINE L1 -794 2107 1533 471 316 76 26 chr10 27415626 27416090 -118173198 - LTR33A LTR ERVL 0 523 9 306 296 0 23 chr10 27416094 27416182 -118173106 - L1MEd LINE L1 -5007 1523 1438 10180 203 63 40 chr10 27416189 27416587 -118172701 - L1MB3 LINE L1 -10 6984 6597 2035 157 0 0 chr10 27416587 27416893 -118172395 - AluSx SINE Alu -6 306 1 10180 203 63 40 chr10 27416893 27418360 -118170928 - L1MB3 LINE L1 -397 6597 5166 324 0 0 0 chr10 27418360 27418396 -118170892 + (TG)n Simple_repeat Simple_repeat 1 36 0 10180 203 63 40 chr10 27418396 27421301 -118167987 - L1MB3 LINE L1 -1828 5166 1972 2436 81 3 0 chr10 27421301 27421611 -118167677 + AluY SINE Alu 1 311 0 10180 203 63 40 chr10 27421611 27421991 -118167297 - L1MB3 LINE L1 -5022 1972 1602 2473 84 3 0 chr10 27422084 27422395 -118166893 - AluSp SINE Alu 0 313 2 1175 259 39 55 chr10 27422494 27422931 -118166357 - L2 LINE L2 -8 3305 2876 201 387 63 0 chr10 27423410 27423521 -118165767 + MIR SINE MIR 20 137 -71 251 296 16 80 chr10 27424515 27424640 -118164648 - L2 LINE L2 0 3313 3197 568 256 40 0 chr10 27424654 27424779 -118164509 - L2 LINE L2 0 3313 3184 813 320 56 70 chr10 27424946 27425514 -118163774 - L2 LINE L2 -1840 1474 915 189 240 0 20 chr10 27426410 27426460 -118162828 + MIR3 SINE MIR 132 180 -28 187 327 220 13 chr10 27428723 27428882 -118160406 + MIR3 SINE MIR 15 206 -2 1417 171 13 112 chr10 27430581 27430966 -118158322 - MLT1A1 LTR MaLR 0 365 19 1697 131 11 58 chr10 27431039 27431314 -118157974 - AluSx SINE Alu -17 295 34 5547 114 12 6 chr10 27431433 27431845 -118157443 - L1PA13 LINE L1 0 6163 5755 2155 125 54 23 chr10 27431845 27432198 -118157090 + THE1B LTR MaLR 1 364 0 5547 114 12 6 chr10 27432198 27433566 -118155722 - L1PA13 LINE L1 -408 5755 4379 1892 168 6 0 chr10 27433580 27433920 -118155368 - L1PA13 LINE L1 -1702 4444 4103 291 28 0 0 chr10 27434506 27434542 -118154746 + (TG)n Simple_repeat Simple_repeat 2 37 0 487 261 39 64 chr10 27434747 27434950 -118154338 - HAL1 LINE L1 -2299 208 11 2448 124 3 8 chr10 27435108 27435479 -118153809 - Tigger2a DNA MER2_type -25 419 51 668 165 0 9 chr10 27435458 27435573 -118153715 - Tigger2a DNA MER2_type -320 114 1 * 423 252 55 0 chr10 27438834 27438961 -118150327 + L1ME1 LINE L1 6029 6162 -4 23 33 0 0 chr10 27439053 27439083 -118150205 + AT_rich Low_complexity Low_complexity 1 30 0 5554 77 17 16 chr10 27439138 27439966 -118149322 - L1M1 LINE L1 -4251 3314 2486 4058 204 21 23 chr10 27439971 27440663 -118148625 - L1M1 LINE L1 -6681 884 193 189 0 0 0 chr10 27440663 27440684 -118148604 + (TC)n Simple_repeat Simple_repeat 2 22 0 4058 204 21 23 chr10 27440684 27440864 -118148424 - L1M1 LINE L1 -7372 193 14 463 322 95 14 chr10 27440991 27441274 -118148014 - L2 LINE L2 0 3313 3008 1337 287 93 58 chr10 27441507 27442760 -118146528 + L1ME LINE L1 36 1331 -5065 2041 266 82 25 chr10 27442801 27443340 -118145948 + L1ME LINE L1 1390 1897 -4318 3003 171 26 16 chr10 27443340 27443661 -118145627 + MER44D DNA MER2_type 2 387 -2100 2142 84 21 14 chr10 27443661 27443947 -118145341 + AluY SINE Alu 1 288 -23 3003 171 26 16 chr10 27443947 27444169 -118145119 + MER44D DNA MER2_type 387 605 0 2041 266 82 25 chr10 27444169 27445693 -118143595 + L1ME LINE L1 1897 3631 -2584 980 318 22 5 chr10 27446129 27446532 -118142756 - L1M4c LINE L1 -4571 2388 1979 1020 140 0 0 chr10 27446534 27446691 -118142597 - AluSg/x SINE Alu 0 312 156 3451 208 66 31 chr10 27446692 27447692 -118141596 - L1M4c LINE L1 -4983 1976 903 4559 128 6 0 chr10 27447704 27448406 -118140882 - L1P LINE L1 -1512 4634 3929 3650 107 0 0 chr10 27448405 27448947 -118140341 + L1P LINE L1 4752 5293 -853 * 413 58 0 0 chr10 27448947 27448993 -118140295 + L1PA10 LINE L1 6100 6151 -17 1398 229 61 20 chr10 27449026 27449541 -118139747 - L1M4c LINE L1 -5963 896 2 596 246 99 78 chr10 27449578 27449604 -118139684 + L1ME LINE L1 3699 3723 -2492 2632 213 78 30 chr10 27449604 27450293 -118138995 - MER72 LTR ERV1 0 722 1 596 246 99 78 chr10 27450293 27450640 -118138648 + L1ME LINE L1 3723 4080 -2135 1113 272 45 0 chr10 27450695 27451008 -118138280 + L1ME LINE L1 5456 5782 -451 1992 133 65 31 chr10 27452949 27453301 -118135987 - THE1B LTR MaLR 0 364 1 795 219 91 0 chr10 27454442 27454629 -118134659 - MER20 DNA MER1_type -2 217 14 2461 66 0 3 chr10 27454658 27454963 -118134325 + AluY SINE Alu 1 304 -7 235 250 19 0 chr10 27455099 27455151 -118134137 + L2 LINE L2 3251 3303 -10 2363 137 119 7 chr10 27455412 27455876 -118133412 - L1MC2 LINE L1 0 6344 5831 1334 206 85 19 chr10 27455977 27456455 -118132833 + L1ME1 LINE L1 4960 5466 -700 950 157 63 26 chr10 27456466 27456657 -118132631 + L1PB1 LINE L1 3 200 -6663 13075 101 114 16 chr10 27456657 27457959 -118131329 + L1PB1 LINE L1 634 2226 -4637 2448 66 0 7 chr10 27457959 27458260 -118131028 - AluY SINE Alu -12 299 1 13075 101 114 16 chr10 27458260 27459087 -118130201 + L1PB1 LINE L1 2226 2971 -3892 1574 199 82 3 chr10 27459095 27459411 -118129877 + LTR9B LTR ERV1 304 644 0 10875 179 20 13 chr10 27459412 27459659 -118129629 + L1PB1 LINE L1 3510 3754 -3113 2002 152 0 0 chr10 27459659 27459962 -118129326 + AluSx SINE Alu 1 303 -9 10875 179 20 13 chr10 27459962 27460092 -118129196 + L1PB1 LINE L1 3754 3882 -2985 207 0 0 0 chr10 27460092 27460115 -118129173 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 10875 179 20 13 chr10 27460115 27463076 -118126212 + L1PB1 LINE L1 3882 6867 0 26 0 0 0 chr10 27463076 27463102 -118126186 + AT_rich Low_complexity Low_complexity 1 26 0 1260 236 60 23 chr10 27463102 27463512 -118125776 + L1ME1 LINE L1 5457 5892 -278 1612 141 56 30 chr10 27463644 27463948 -118125340 - AluJo SINE Alu 0 312 1 517 230 72 0 chr10 27464242 27464381 -118124907 + MIR SINE MIR 114 262 0 39052 51 3 1 chr10 27465221 27470921 -118118367 - L1PA5 LINE L1 -7 6147 435 880 293 69 18 chr10 27472232 27472624 -118116664 + MLT1L LTR MaLR 142 553 -62 2307 74 0 3 chr10 27473593 27473901 -118115387 - AluY SINE Alu 0 307 1 738 314 69 31 chr10 27474394 27474814 -118114474 + L2 LINE L2 2311 2746 -568 365 118 0 0 chr10 27475381 27475432 -118113856 - Alu SINE Alu -8 293 243 1860 135 168 11 chr10 27475482 27475852 -118113436 - MSTA LTR MaLR 0 428 1 1743 173 0 18 chr10 27476406 27476689 -118112599 + AluJo SINE Alu 4 281 -31 1804 174 142 74 chr10 27476956 27477526 -118111762 - LTR10A LTR ERV1 0 609 1 184 356 41 0 chr10 27477654 27477727 -118111561 + L2 LINE L2 3179 3254 -18 222 337 54 36 chr10 27477747 27477913 -118111375 + MIR SINE MIR 68 236 -26 286 250 16 0 chr10 27477959 27478023 -118111265 + L2 LINE L2 3248 3312 -1 4734 207 78 23 chr10 27479013 27480339 -118108949 + L1MC4 LINE L1 6473 7904 -138 201 147 0 0 chr10 27480379 27480413 -118108875 + (TATATG)n Simple_repeat Simple_repeat 3 36 0 20614 30 8 7 chr10 27480832 27484096 -118105192 + L1PA3 LINE L1 2886 6152 -3 195 230 69 69 chr10 27484450 27484537 -118104751 + MIR3 SINE MIR 108 194 -14 196 318 152 0 chr10 27484993 27485059 -118104229 - L3 LINE CR1 -3 1574 1499 2331 101 10 0 chr10 27485157 27485464 -118103824 - AluSg SINE Alu 0 310 1 292 270 0 45 chr10 27485498 27485587 -118103701 - MIR3 SINE MIR -40 168 84 544 158 0 21 chr10 27485720 27485815 -118103473 - AluSg/x SINE Alu -19 290 198 1698 177 0 32 chr10 27485849 27486160 -118103128 + AluJb SINE Alu 1 301 -11 9084 175 21 17 chr10 27486202 27488987 -118100301 + L1PB3 LINE L1 3369 6154 0 277 194 0 28 chr10 27489185 27489257 -118100031 - MLT2D LTR ERVL -295 119 50 271 98 0 0 chr10 27489340 27489381 -118099907 - MLT2D LTR ERVL -373 41 1 264 326 31 0 chr10 27490225 27490323 -118098965 + MIR3 SINE MIR 87 187 -21 25 65 0 0 chr10 27492274 27492320 -118096968 + AT_rich Low_complexity Low_complexity 1 46 0 42 36 0 0 chr10 27492678 27492734 -118096554 + AT_rich Low_complexity Low_complexity 1 56 0 579 242 0 0 chr10 27493365 27493493 -118095795 + MER94 DNA DNA 4 131 -3 883 229 46 29 chr10 27493674 27493914 -118095374 - L1MB8 LINE L1 -1 6177 5934 482 0 0 17 chr10 27493914 27493973 -118095315 + (TTTA)n Simple_repeat Simple_repeat 2 59 0 1513 61 0 0 chr10 27493973 27494154 -118095134 - AluY SINE Alu -24 287 107 1293 104 0 0 chr10 27494155 27494318 -118094970 - AluY SINE Alu -148 163 1 1268 183 21 7 chr10 27494318 27494586 -118094702 - L1MB8 LINE L1 -241 5913 5662 209 238 0 0 chr10 27494747 27494789 -118094499 + (TA)n Simple_repeat Simple_repeat 1 42 0 34 24 0 0 chr10 27496750 27496791 -118092497 + AT_rich Low_complexity Low_complexity 1 41 0 1622 215 24 1 chr10 27499025 27499431 -118089857 - L1PA15-16 LINE L1 -3845 3004 2591 360 319 29 91 chr10 27499491 27499732 -118089556 + L2 LINE L2 3031 3256 -16 784 331 128 20 chr10 27500089 27500494 -118088794 - L3 LINE CR1 -12 1565 1117 2159 87 4 0 chr10 27501409 27501686 -118087602 - AluY SINE Alu -17 294 17 1897 172 0 0 chr10 27502050 27502347 -118086941 - AluJb SINE Alu -15 297 1 387 270 116 21 chr10 27502363 27502596 -118086692 - L1ME4a LINE L1 -188 5933 5679 23 33 0 0 chr10 27502643 27502673 -118086615 + AT_rich Low_complexity Low_complexity 1 30 0 619 305 62 13 chr10 27502796 27503022 -118086266 - MIR SINE MIR -12 250 14 1921 237 69 14 chr10 27503328 27503818 -118085470 - LTR40a LTR ERVL 0 519 3 483 298 50 32 chr10 27503953 27504232 -118085056 - L1MEd LINE L1 -4862 1257 974 22 80 0 0 chr10 27505018 27505068 -118084220 + AT_rich Low_complexity Low_complexity 1 50 0 21 0 0 0 chr10 27505434 27505455 -118083833 + AT_rich Low_complexity Low_complexity 1 21 0 598 202 18 0 chr10 27506361 27506495 -118082793 - FLAM_A SINE Alu 0 140 5 2389 78 0 3 chr10 27507037 27507343 -118081945 + AluSg SINE Alu 1 305 -5 339 355 69 16 chr10 27507683 27507765 -118081523 + L2 LINE L2 2304 2380 -934 2060 107 0 24 chr10 27507765 27508081 -118081207 - AluSg SINE Alu 0 309 1 339 355 69 16 chr10 27508081 27508186 -118081102 + L2 LINE L2 2380 2502 -812 32 26 0 0 chr10 27509524 27509563 -118079725 + AT_rich Low_complexity Low_complexity 1 39 0 305 267 119 0 chr10 27510269 27510370 -118078918 - MIR3 SINE MIR -1 207 95 2278 77 0 20 chr10 27510643 27510941 -118078347 - AluY SINE Alu -19 292 1 407 302 9 93 chr10 27511673 27511888 -118077400 + MIR SINE MIR 32 228 -34 256 296 0 0 chr10 27511944 27511998 -118077290 + L2 LINE L2 3241 3294 -19 8987 171 80 14 chr10 27512207 27512326 -118076962 - L1 LINE L1 -1161 6404 6294 1366 131 123 78 chr10 27512326 27512685 -118076603 - THE1C LTR MaLR 0 375 1 8987 171 80 14 chr10 27512685 27513724 -118075564 - L1 LINE L1 -1271 6294 5325 2031 68 0 68 chr10 27513724 27514039 -118075249 - AluSp SINE Alu 0 319 24 8987 171 80 14 chr10 27514039 27514881 -118074407 - L1 LINE L1 -2240 5325 4269 3362 122 0 4 chr10 27514887 27515377 -118073911 - MER75 DNA T2_type -24 490 3 19368 157 40 6 chr10 27515379 27516037 -118073251 - L1 LINE L1 -3280 4285 3651 216 67 0 0 chr10 27516037 27516067 -118073221 + (TTG)n Simple_repeat Simple_repeat 2 31 0 19368 157 40 6 chr10 27516067 27517852 -118071436 - L1 LINE L1 -3914 3651 1657 333 0 0 0 chr10 27517852 27517889 -118071399 + (TC)n Simple_repeat Simple_repeat 2 38 0 19368 157 40 6 chr10 27517889 27519260 -118070028 - L1 LINE L1 -5908 1657 334 450 0 0 0 chr10 27520069 27520119 -118069169 + (TAGA)n Simple_repeat Simple_repeat 1 50 0 255 114 0 0 chr10 27520156 27520191 -118069097 + MER21A LTR ERV1 34 68 -863 2486 170 133 113 chr10 27520301 27521119 -118068169 + MER21A LTR ERV1 70 904 -27 202 200 50 0 chr10 27521146 27521186 -118068102 + MER91B DNA MER1_type 36 77 -113 2496 58 0 13 chr10 27522194 27522504 -118066784 + AluY SINE Alu 1 306 -5 206 269 19 0 chr10 27523236 27523288 -118066000 + (TATATG)n Simple_repeat Simple_repeat 2 54 0 1345 278 75 8 chr10 27523381 27523871 -118065417 - L2 LINE L2 -933 2381 1859 275 292 77 15 chr10 27523872 27524002 -118065286 + L1MC4a LINE L1 7315 7452 -356 709 293 171 10 chr10 27524024 27524369 -118064919 - L2 LINE L2 -1469 1845 1422 2306 104 13 0 chr10 27524369 27524676 -118064612 - AluY SINE Alu 0 311 1 709 293 171 10 chr10 27524676 27524740 -118064548 - L2 LINE L2 -1892 1422 1370 266 193 0 0 chr10 27524777 27524834 -118064454 + L1ME4a LINE L1 6063 6119 -2 384 98 0 7 chr10 27524920 27524984 -118064304 - Alu SINE Alu -251 49 1 186 97 75 21 chr10 27526239 27526332 -118062956 + (TA)n Simple_repeat Simple_repeat 2 99 0 967 265 15 0 chr10 27526425 27526629 -118062659 + MER58A DNA MER1_type 5 211 -13 229 246 16 0 chr10 27527881 27527942 -118061346 + (TA)n Simple_repeat Simple_repeat 2 63 0 527 281 145 42 chr10 27528043 27528246 -118061042 - L2 LINE L2 -4 3309 3128 2137 129 0 3 chr10 27528246 27528555 -118060733 + AluSg SINE Alu 1 308 -2 527 281 145 42 chr10 27528555 27528971 -118060317 - L2 LINE L2 -185 3128 2625 278 263 20 81 chr10 27529170 27529201 -118060087 + LTR33 LTR ERVL 5 36 -485 1867 195 87 19 chr10 27529201 27529672 -118059616 + MLT1D LTR MaLR 3 505 0 278 263 20 81 chr10 27529672 27529739 -118059549 + LTR33 LTR ERVL 36 97 -424 586 266 86 27 chr10 27529748 27529970 -118059318 + LTR33 LTR ERVL 221 455 -66 2339 195 66 2 chr10 27529973 27530430 -118058858 + L1MCa LINE L1 28 513 -5913 3490 181 49 32 chr10 27530431 27531230 -118058058 + L1MCa LINE L1 613 1424 -5002 4308 171 26 4 chr10 27532519 27533321 -118055967 - L1MC1 LINE L1 -5 6328 5509 3310 232 33 2 chr10 27533323 27534197 -118055091 - L1MC1 LINE L1 -1405 4741 3841 224 306 67 15 chr10 27534404 27534538 -118054750 + L2 LINE L2 3165 3305 -8 1871 100 0 16 chr10 27534576 27534678 -118054610 + AluSx SINE Alu 35 137 -168 2189 106 0 13 chr10 27534678 27535021 -118054267 + AluSp SINE Alu 1 313 0 1871 100 0 16 chr10 27535021 27535193 -118054095 + AluSx SINE Alu 137 305 0 2532 70 0 3 chr10 27535619 27535931 -118053357 - AluY SINE Alu 0 311 1 249 376 36 21 chr10 27536082 27536405 -118052883 - L2 LINE L2 -211 3061 2702 224 325 48 16 chr10 27536764 27536890 -118052398 - L2 LINE L2 0 3313 3184 2154 95 7 0 chr10 27536962 27537236 -118052052 + AluSc SINE Alu 22 297 -12 356 131 33 0 chr10 27537309 27537370 -118051918 - L1M4 LINE L1 -898 5248 5186 228 190 52 35 chr10 27537891 27537949 -118051339 - LTR33 LTR ERVL -6 515 457 1089 236 7 7 chr10 27537983 27538271 -118051017 - L1M4 LINE L1 -974 5172 4885 3105 274 133 37 chr10 27538618 27540005 -118049283 - L2 LINE L2 -2 3311 2058 2227 107 3 7 chr10 27540005 27540315 -118048973 + AluSx SINE Alu 2 310 -2 3105 274 133 37 chr10 27540315 27540537 -118048751 - L2 LINE L2 -1255 2058 1859 2601 26 3 19 chr10 27540537 27540846 -118048442 + AluY SINE Alu 1 304 -7 3105 274 133 37 chr10 27540846 27540888 -118048400 - L2 LINE L2 -1454 1859 1507 384 117 0 78 chr10 27544359 27544417 -118044871 + L1ME1 LINE L1 5775 5827 -337 1469 158 21 4 chr10 27544417 27544651 -118044637 + AluJo SINE Alu 65 302 -10 384 117 0 78 chr10 27544651 27544669 -118044619 + L1ME1 LINE L1 5827 5845 -319 1886 90 7 80 chr10 27544697 27544998 -118044290 + AluY SINE Alu 1 279 -32 291 98 0 0 chr10 27544998 27545065 -118044223 + Alu SINE Alu 241 307 0 23 0 0 0 chr10 27545065 27545088 -118044200 + AT_rich Low_complexity Low_complexity 1 23 0 1279 209 36 10 chr10 27545088 27545394 -118043894 + L1ME1 LINE L1 5845 6158 -8 417 325 36 16 chr10 27545713 27545965 -118043323 - L1M4 LINE L1 -1146 5000 4744 244 87 101 0 chr10 27545983 27546052 -118043236 + (TA)n Simple_repeat Simple_repeat 1 76 0 2573 224 15 5 chr10 27546059 27546671 -118042617 - L1 LINE L1 -904 6263 5646 1771 136 3 10 chr10 27546685 27546979 -118042309 - L1PB1 LINE L1 0 6867 6576 425 109 0 70 chr10 27546981 27547248 -118042040 + (TA)n Simple_repeat Simple_repeat 1 248 0 13840 197 60 17 chr10 27547268 27553496 -118035792 - L1PB1 LINE L1 -360 6507 6 1829 154 51 2 chr10 27553521 27553931 -118035357 - L1 LINE L1 -1510 5657 5228 1082 135 81 9 chr10 27553933 27554155 -118035133 - Tigger7 DNA MER2_type 0 2491 2254 246 62 0 0 chr10 27554155 27554187 -118035101 + (TC)n Simple_repeat Simple_repeat 1 32 0 3454 162 71 3 chr10 27554189 27554836 -118034452 - Tigger7 DNA MER2_type -1755 732 42 1316 209 0 3 chr10 27554846 27555138 -118034150 - L1 LINE L1 -1941 5226 4936 3974 209 23 14 chr10 27555555 27555896 -118033392 - L1 LINE L1 -2201 4966 4630 1818 180 0 16 chr10 27555896 27556213 -118033075 - AluJo SINE Alu 0 312 1 3974 209 23 14 chr10 27556213 27556983 -118032305 - L1 LINE L1 -2537 4630 3845 1326 213 27 45 chr10 27557103 27557460 -118031828 - L1 LINE L1 -6769 399 48 1777 156 46 22 chr10 27557460 27557826 -118031462 - THE1C LTR MaLR 0 375 1 1326 213 27 45 chr10 27557826 27557872 -118031416 - L1 LINE L1 -7120 48 3 26 50 0 0 chr10 27559561 27559601 -118029687 + AT_rich Low_complexity Low_complexity 1 40 0 185 222 0 0 chr10 27559888 27559933 -118029355 - L2 LINE L2 -6 3307 3263 2228 82 10 0 chr10 27560726 27561017 -118028271 + AluY SINE Alu 1 294 -17 464 330 108 0 chr10 27561115 27561300 -118027988 + MIR SINE MIR 56 260 -2 220 205 0 0 chr10 27561340 27561379 -118027909 + L2 LINE L2 3216 3254 -18 652 279 25 5 chr10 27562375 27562576 -118026712 - LTR33 LTR ERVL -296 225 21 180 366 40 30 chr10 27562916 27563017 -118026271 - L2 LINE L2 -9 3263 3162 541 286 81 24 chr10 27563029 27563239 -118026049 - MIR SINE MIR -13 249 28 292 200 0 0 chr10 27563262 27563312 -118025976 - L2 LINE L2 0 3313 3264 223 198 55 66 chr10 27563387 27563478 -118025810 - L2 LINE L2 -1891 1423 1334 2457 65 3 0 chr10 27563588 27563881 -118025407 + AluY SINE Alu 1 294 -17 191 86 35 52 chr10 27565073 27565131 -118024157 + G-rich Low_complexity Low_complexity 4 60 0 27 29 0 0 chr10 27565288 27565322 -118023966 + AT_rich Low_complexity Low_complexity 1 34 0 233 274 177 52 chr10 27565817 27566218 -118023070 + L2 LINE L2 1980 2430 -884 2534 62 0 0 chr10 27566722 27567028 -118022260 - AluY SINE Alu -4 307 2 200 247 286 0 chr10 27568049 27568126 -118021162 - MIR3 SINE MIR 0 208 110 402 333 118 0 chr10 27568126 27568330 -118020958 + MIR SINE MIR 1 228 -34 * 579 218 109 12 chr10 27568309 27568474 -118020814 + L2 LINE L2 3127 3307 -6 223 308 192 0 chr10 27569050 27569170 -118020118 - MIR SINE MIR -10 252 110 228 281 12 0 chr10 27569207 27569289 -118019999 + (CATATA)n Simple_repeat Simple_repeat 5 87 0 1315 169 72 63 chr10 27569312 27569674 -118019614 - L1MB8 LINE L1 -1 6177 5813 38004 72 10 7 chr10 27569696 27575819 -118013469 - L1PA5 LINE L1 -3 6151 11 2865 191 27 17 chr10 27575821 27577019 -118012269 - L1MB8 LINE L1 -345 5833 4622 270 0 0 0 chr10 27577174 27577204 -118012084 + (CA)n Simple_repeat Simple_repeat 2 31 0 865 316 55 25 chr10 27577268 27577905 -118011383 - L1MC4a LINE L1 -1898 5910 5255 23 68 0 0 chr10 27578124 27578168 -118011120 + AT_rich Low_complexity Low_complexity 1 44 0 336 300 50 27 chr10 27578256 27578556 -118010732 - L1MC4a LINE L1 -1314 4832 4526 22 0 0 0 chr10 27578661 27578683 -118010605 + AT_rich Low_complexity Low_complexity 1 22 0 465 282 95 25 chr10 27578728 27579253 -118010035 - L1MC4a LINE L1 -1904 4242 3681 202 253 67 27 chr10 27579381 27579456 -118009832 + MER5A DNA MER1_type 87 164 -25 2260 103 0 3 chr10 27579508 27579809 -118009479 + AluY SINE Alu 1 300 -11 397 278 99 81 chr10 27579897 27580343 -118008945 - L1MC4a LINE L1 -2703 3443 2990 1141 221 72 0 chr10 27581586 27581835 -118007453 + Tigger7 DNA MER2_type 1 267 -466 515 168 0 40 chr10 27581834 27581935 -118007353 + Tigger7 DNA MER2_type 2490 2586 -1 * 1604 193 23 20 chr10 27583164 27583470 -118005818 - AluJo SINE Alu -3 309 3 227 175 0 0 chr10 27584903 27584943 -118004345 + CT-rich Low_complexity Low_complexity 1 40 0 2112 123 10 3 chr10 27585493 27585802 -118003486 + AluSx SINE Alu 1 311 -1 341 320 64 6 chr10 27586019 27586175 -118003113 + MIR3 SINE MIR 35 199 -9 403 348 85 0 chr10 27587020 27587138 -118002150 - L2 LINE L2 -9 3263 3136 360 403 28 17 chr10 27587290 27587578 -118001710 - L2 LINE L2 -400 2914 2624 2220 183 24 21 chr10 27588408 27588873 -118000415 - MLT1C LTR MaLR -1 466 1 1050 163 36 50 chr10 27589024 27589245 -118000043 - MER20 DNA MER1_type 0 219 2 6048 66 5 23 chr10 27589631 27590500 -117998788 - L1PA13 LINE L1 -11 6152 5300 689 275 122 59 chr10 27590660 27590935 -117998353 + L2 LINE L2 2489 2745 -568 2239 100 0 7 chr10 27590935 27591235 -117998053 - AluSx SINE Alu -14 298 1 689 275 122 59 chr10 27591235 27591732 -117997556 + L2 LINE L2 2745 3294 -19 1553 173 20 39 chr10 27592177 27592483 -117996805 + AluJo SINE Alu 1 300 -12 199 278 11 100 chr10 27592739 27592829 -117996459 - L2 LINE L2 -7 3306 3225 2168 92 0 4 chr10 27593785 27594058 -117995230 + AluSx SINE Alu 15 286 -26 344 372 28 0 chr10 27594789 27594934 -117994354 + L2 LINE L2 2531 2679 -635 225 154 0 0 chr10 27595003 27595042 -117994246 + CT-rich Low_complexity Low_complexity 3 41 0 241 268 141 0 chr10 27595130 27595201 -117994087 + L2 LINE L2 3191 3271 -1 439 330 125 47 chr10 27595208 27595763 -117993525 + L1M4 LINE L1 4778 5403 -743 2338 93 0 0 chr10 27595948 27596259 -117993029 + AluY SINE Alu 1 311 0 1489 158 0 20 chr10 27596268 27596514 -117992774 + AluJo SINE Alu 64 304 -8 346 300 0 0 chr10 27599292 27599382 -117989906 + MIR3 SINE MIR 65 154 -54 208 291 0 0 chr10 27599567 27599622 -117989666 + MIR3 SINE MIR 151 205 -3 42 71 0 0 chr10 27600060 27600144 -117989144 + AT_rich Low_complexity Low_complexity 1 84 0 1794 157 0 20 chr10 27602415 27602715 -117986573 - AluJb SINE Alu -18 294 1 949 213 0 0 chr10 27605901 27606070 -117983218 - FRAM SINE Alu -15 161 1 593 188 13 34 chr10 27606822 27606971 -117982317 + L1MC4 LINE L1 7897 8042 0 224 293 85 37 chr10 27607408 27607490 -117981798 - MIR SINE MIR -104 104 19 32 43 0 0 chr10 27607649 27607695 -117981593 + AT_rich Low_complexity Low_complexity 1 46 0 2117 104 33 3 chr10 27607999 27608298 -117980990 + AluSq SINE Alu 3 310 -3 2004 132 7 7 chr10 27609040 27609344 -117979944 + AluSx SINE Alu 1 304 -8 21 0 0 0 chr10 27609399 27609420 -117979868 + AT_rich Low_complexity Low_complexity 1 21 0 3515 120 92 21 chr10 27609589 27610645 -117978643 + MER11A LTR ERVK 1 1236 0 23 39 0 39 chr10 27611528 27611552 -117977736 + AT_rich Low_complexity Low_complexity 1 24 -26 1882 102 8 16 chr10 27611552 27611807 -117977481 - AluSp SINE Alu -24 289 37 23 39 0 39 chr10 27611807 27611834 -117977454 + AT_rich Low_complexity Low_complexity 24 50 0 1591 137 67 39 chr10 27611914 27612198 -117977090 + AluSx SINE Alu 1 292 -20 194 172 276 0 chr10 27612369 27612427 -117976861 - L2 LINE L2 -251 3062 2989 2395 97 0 3 chr10 27612706 27613016 -117976272 + AluSx SINE Alu 1 309 -3 1080 115 0 33 chr10 27613250 27613432 -117975856 + AluY SINE Alu 129 304 -7 282 286 16 0 chr10 27616904 27616967 -117972321 + MIR SINE MIR 40 103 -105 329 217 69 79 chr10 27617986 27618189 -117971099 + L1M4 LINE L1 4290 4490 -1656 212 0 36 0 chr10 27618514 27618542 -117970746 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 2119 105 0 0 chr10 27618544 27618821 -117970467 - AluY SINE Alu -29 282 6 342 264 76 36 chr10 27620170 27620334 -117968954 - MIR SINE MIR -61 147 4 2334 87 0 0 chr10 27620648 27620937 -117968351 + AluSx SINE Alu 1 289 -23 201 245 20 0 chr10 27621447 27621496 -117967792 - L3b LINE CR1 -5 1578 1529 992 161 21 32 chr10 27622347 27622493 -117966795 + MER5A DNA MER1_type 1 146 -43 2355 88 0 10 chr10 27622493 27622798 -117966490 + AluSq SINE Alu 1 302 -11 992 161 21 32 chr10 27622798 27622837 -117966451 + MER5A DNA MER1_type 146 184 -5 1330 177 56 76 chr10 27623967 27624363 -117964925 - MLT1B LTR MaLR -2 388 1 860 133 0 0 chr10 27624430 27624550 -117964738 + FLAM_C SINE Alu 1 120 -13 245 250 0 0 chr10 27624947 27625011 -117964277 + (ATG)n Simple_repeat Simple_repeat 2 65 0 567 229 14 7 chr10 27625646 27625657 -117963631 - L1MA10 LINE L1 -2 6332 6322 421 282 41 18 chr10 27625657 27625827 -117963461 - L1ME1 LINE L1 -4 6162 5989 3118 203 43 75 chr10 27625835 27626825 -117962463 - L1MDa LINE L1 -1222 5318 4362 2258 123 0 0 chr10 27626825 27627134 -117962154 - AluSx SINE Alu -3 309 1 3118 203 43 75 chr10 27627134 27627200 -117962088 - L1MDa LINE L1 -2178 4362 4295 1901 137 232 29 chr10 27627224 27627629 -117961659 - L1MA8 LINE L1 -2 6289 5767 252 0 0 0 chr10 27627629 27627657 -117961631 + (TG)n Simple_repeat Simple_repeat 2 29 0 1901 137 232 29 chr10 27627657 27627739 -117961549 - L1MA8 LINE L1 -524 5767 5703 4158 235 124 12 chr10 27627739 27629334 -117959954 - L1MDa LINE L1 -2273 4267 2475 877 225 38 21 chr10 27629345 27629585 -117959703 - L1MDa LINE L1 -6117 604 361 436 257 164 33 chr10 27629847 27630030 -117959258 - MIR SINE MIR 0 262 56 414 286 106 25 chr10 27630738 27630937 -117958351 - MIR SINE MIR -28 234 20 2147 123 7 3 chr10 27631769 27632079 -117957209 - AluSx SINE Alu -1 311 1 1240 115 5 0 chr10 27634289 27634480 -117954808 - L1PA13 LINE L1 -3 6160 5969 246 290 111 44 chr10 27635320 27635420 -117953868 + MIR SINE MIR 3 95 -167 1275 122 0 80 chr10 27635420 27635658 -117953630 + MER20 DNA MER1_type 1 219 0 246 290 111 44 chr10 27635658 27635742 -117953546 + MIR SINE MIR 95 195 -67 2353 87 0 10 chr10 27635844 27636154 -117953134 - AluY SINE Alu -4 307 1 22 0 0 0 chr10 27636259 27636281 -117953007 + AT_rich Low_complexity Low_complexity 1 22 0 2128 79 61 0 chr10 27636609 27636889 -117952399 - AluY SINE Alu -14 297 1 2407 61 0 61 chr10 27636948 27637278 -117952010 - AluY SINE Alu -1 310 1 1498 171 19 26 chr10 27638005 27638274 -117951014 + AluJo SINE Alu 46 312 0 607 265 14 62 chr10 27639104 27639315 -117949973 + MIR SINE MIR 3 203 -59 25 0 0 0 chr10 27639357 27639382 -117949906 + AT_rich Low_complexity Low_complexity 1 25 0 182 263 0 35 chr10 27639498 27639555 -117949733 - L2 LINE L2 -2 3270 3216 296 232 37 49 chr10 27639719 27639801 -117949487 + L2 LINE L2 3232 3312 -1 208 342 171 34 chr10 27640908 27642477 -117946811 - L2 LINE L2 -557 2757 975 199 327 139 0 chr10 27642714 27642815 -117946473 - MIR3 SINE MIR -36 172 58 756 218 42 0 chr10 27643981 27644146 -117945142 + AluJo SINE Alu 120 291 -21 242 211 211 0 chr10 27645784 27645860 -117943428 + L2 LINE L2 3160 3251 -21 532 278 14 0 chr10 27647088 27647232 -117942056 + MER112 DNA MER1_type 111 256 -4 747 216 125 26 chr10 27647385 27647649 -117941639 + MER46C DNA MER2_type 10 299 -39 191 337 12 12 chr10 27652933 27653019 -117936269 + MIR3 SINE MIR 87 172 -36 2583 44 0 0 chr10 27653613 27653909 -117935379 + AluY SINE Alu 1 296 -15 1822 116 0 4 chr10 27655931 27656182 -117933106 + AluSx SINE Alu 62 311 -1 2012 86 52 0 chr10 27656391 27656687 -117932601 - AluY SINE Alu 0 310 1 2300 109 0 13 chr10 27656690 27657003 -117932285 - AluSq SINE Alu -4 309 1 1111 131 171 0 chr10 27657003 27657202 -117932086 + MER6 DNA MER2_type 633 865 0 2254 94 0 3 chr10 27657447 27657735 -117931553 - AluSx SINE Alu -25 287 1 272 290 66 66 chr10 27657790 27658197 -117931091 + L1ME LINE L1 3814 4220 -1926 381 305 106 39 chr10 27658949 27659483 -117929805 + L1ME LINE L1 5122 5691 -430 306 205 48 0 chr10 27659501 27659584 -117929704 + L1ME LINE L1 5751 5837 -284 22 0 0 0 chr10 27660249 27660271 -117929017 + AT_rich Low_complexity Low_complexity 1 22 0 2602 55 3 0 chr10 27660843 27661151 -117928137 + AluY SINE Alu 1 309 -2 683 189 24 0 chr10 27661543 27661670 -117927618 + FLAM_A SINE Alu 4 133 0 2360 116 0 0 chr10 27662930 27663240 -117926048 - AluSx SINE Alu -2 310 1 633 294 101 32 chr10 27663469 27663864 -117925424 - L1MC4a LINE L1 -298 5823 5459 2480 80 0 0 chr10 27663864 27664166 -117925122 - AluY SINE Alu -9 302 1 633 294 101 32 chr10 27664166 27664384 -117924904 - L1MC4a LINE L1 -662 5459 5257 1238 140 72 0 chr10 27664895 27665088 -117924200 - MLT1B LTR MaLR 0 390 184 7822 30 7 1 chr10 27665091 27666668 -117922620 - L1PA4 LINE L1 0 6155 4574 1067 24 0 0 chr10 27666668 27666791 -117922497 + L1PA4 LINE L1 4464 4586 -1560 1316 116 26 0 chr10 27666791 27666981 -117922307 - MLT1B LTR MaLR -195 195 1 2189 123 10 0 chr10 27667384 27667693 -117921595 + AluSx SINE Alu 1 312 0 194 352 64 59 chr10 27667725 27667961 -117921327 - L2 LINE L2 -668 2646 2410 238 330 66 19 chr10 27668180 27668286 -117921002 - L2 LINE L2 -24 3289 3179 319 115 0 0 chr10 27668383 27668435 -117920853 + MADE1 DNA Mariner 29 80 0 22 35 0 0 chr10 27669403 27669432 -117919856 + AT_rich Low_complexity Low_complexity 1 29 0 192 77 0 0 chr10 27670221 27670247 -117919041 + (TCCC)n Simple_repeat Simple_repeat 1 26 0 2270 117 3 7 chr10 27670247 27670555 -117918733 - AluSq SINE Alu -6 307 1 230 347 129 35 chr10 27671541 27672077 -117917211 + L2 LINE L2 2384 2969 -345 262 254 28 0 chr10 27672459 27672530 -117916758 + (CATA)n Simple_repeat Simple_repeat 3 75 0 313 185 204 9 chr10 27672544 27672652 -117916636 - L1MB8 LINE L1 -7 6171 6043 201 260 0 0 chr10 27672931 27672981 -117916307 + CT-rich Low_complexity Low_complexity 2 51 0 21 0 0 0 chr10 27676939 27676960 -117912328 + GC_rich Low_complexity Low_complexity 1 21 0 333 0 0 0 chr10 27677599 27677636 -117911652 + (CA)n Simple_repeat Simple_repeat 1 37 0 22 35 0 0 chr10 27678366 27678395 -117910893 + AT_rich Low_complexity Low_complexity 1 29 0 315 71 0 0 chr10 27682734 27682776 -117906512 + (TG)n Simple_repeat Simple_repeat 2 43 0 2031 117 0 0 chr10 27686039 27686305 -117902983 - AluSx SINE Alu -11 301 36 849 198 75 16 chr10 27686611 27686798 -117902490 + MER20 DNA MER1_type 7 204 -15 1997 129 0 72 chr10 27687571 27687934 -117901354 + MER1B DNA MER1_type 1 337 0 2321 99 0 13 chr10 27687955 27688258 -117901030 + AluSx SINE Alu 1 299 -13 1083 190 57 14 chr10 27689024 27689235 -117900053 + AluJb SINE Alu 83 302 -10 187 98 0 49 chr10 27689288 27689329 -117899959 + (GGGAA)n Simple_repeat Simple_repeat 4 42 0 1596 178 7 22 chr10 27689473 27689772 -117899516 - AluJo SINE Alu 0 305 11 2089 118 3 10 chr10 27689855 27690152 -117899136 + AluSq SINE Alu 3 297 -16 244 200 0 0 chr10 27690393 27690443 -117898845 + (TG)n Simple_repeat Simple_repeat 2 51 0 1726 185 150 70 chr10 27690657 27691117 -117898171 - MLT1D LTR MaLR -4 501 5 2039 100 0 85 chr10 27691517 27691848 -117897440 - AluSx SINE Alu -7 305 3 300 264 81 47 chr10 27692079 27692227 -117897061 - MIR SINE MIR -27 235 83 2434 80 6 10 chr10 27693089 27693402 -117895886 + AluSq SINE Alu 1 312 -1 338 286 10 0 chr10 27693404 27693502 -117895786 - MIR SINE MIR -59 149 51 618 319 5 14 chr10 27693603 27693813 -117895475 + MIR SINE MIR 23 230 -32 2309 101 0 3 chr10 27693925 27694221 -117895067 - AluSx SINE Alu -17 295 1 327 224 40 0 chr10 27694653 27694729 -117894559 - L3 LINE CR1 -3 1574 1496 944 168 7 0 chr10 27695162 27695317 -117893971 - FRAM SINE Alu -13 163 8 2412 105 0 0 chr10 27695335 27695648 -117893640 - AluSq SINE Alu 0 313 1 257 295 41 16 chr10 27696421 27696543 -117892745 + MIR SINE MIR 126 250 -12 2026 114 22 0 chr10 27696773 27697046 -117892242 + AluSx SINE Alu 1 279 -33 417 20 0 0 chr10 27697046 27697096 -117892192 + (CA)n Simple_repeat Simple_repeat 1 50 0 478 149 0 10 chr10 27698224 27698311 -117890977 - L1MB8 LINE L1 -220 5958 5876 256 200 0 0 chr10 27699010 27699055 -117890233 + L2 LINE L2 3267 3311 -2 1038 168 25 0 chr10 27699887 27700084 -117889204 - L1MA4 LINE L1 0 6300 6099 2075 176 124 0 chr10 27700123 27700533 -117888755 - LOR1b LTR ERV1 0 461 1 2064 104 3 7 chr10 27700666 27700954 -117888334 - AluSq SINE Alu -26 287 1 244 306 66 50 chr10 27700975 27701096 -117888192 + L2 LINE L2 3158 3280 -33 1577 173 0 53 chr10 27702359 27702682 -117886606 + AluJb SINE Alu 1 306 -6 29 70 0 0 chr10 27704166 27704223 -117885065 + AT_rich Low_complexity Low_complexity 1 57 0 2388 39 0 32 chr10 27704487 27704795 -117884493 + AluY SINE Alu 1 298 -13 317 311 0 30 chr10 27706362 27706497 -117882791 - MER94 DNA DNA 0 134 4 471 314 78 12 chr10 27706907 27707152 -117882136 + MIR SINE MIR 1 261 -1 480 258 107 31 chr10 27707257 27707416 -117881872 - MIR3 SINE MIR -34 174 4 641 263 161 10 chr10 27707591 27707796 -117881492 - MIR SINE MIR -15 247 12 5395 130 26 70 chr10 27708215 27708693 -117880595 - L1MA8 LINE L1 -3 6288 5791 2444 67 0 10 chr10 27708693 27709007 -117880281 - AluY SINE Alu 0 311 1 5395 130 26 70 chr10 27709007 27709154 -117880134 - L1MA8 LINE L1 -500 5791 5639 2099 112 7 0 chr10 27709154 27709449 -117879839 - AluSx SINE Alu -15 297 1 5395 130 26 70 chr10 27709449 27709510 -117879778 - L1MA8 LINE L1 -652 5639 5577 2133 99 0 0 chr10 27709510 27709837 -117879451 - AluSx SINE Alu 0 327 1 5395 130 26 70 chr10 27709837 27711165 -117878123 - L1MA8 LINE L1 -714 5577 4342 286 307 223 18 chr10 27711501 27711667 -117877621 + MIR SINE MIR 47 246 -16 3197 251 133 54 chr10 27711918 27712901 -117876387 + L2 LINE L2 1036 1940 -1373 1548 160 0 32 chr10 27712901 27713183 -117876105 + AluJb SINE Alu 1 273 -39 3197 251 133 54 chr10 27713183 27714062 -117875226 + L2 LINE L2 1940 3147 -166 210 71 0 0 chr10 27714062 27714090 -117875198 + (CA)n Simple_repeat Simple_repeat 2 29 0 3197 251 133 54 chr10 27714090 27714272 -117875016 + L2 LINE L2 3147 3313 0 206 220 17 85 chr10 27716338 27716397 -117872891 - MIR3 SINE MIR -23 185 131 21 0 0 0 chr10 27720979 27721000 -117868288 + GC_rich Low_complexity Low_complexity 1 21 0 423 0 0 0 chr10 27721639 27721686 -117867602 + (CA)n Simple_repeat Simple_repeat 1 47 0 22 35 0 0 chr10 27722416 27722445 -117866843 + AT_rich Low_complexity Low_complexity 1 29 0 315 71 0 0 chr10 27726784 27726826 -117862462 + (TG)n Simple_repeat Simple_repeat 2 43 0 1919 117 0 0 chr10 27730089 27730355 -117858933 - AluSx SINE Alu -11 301 36 858 198 75 16 chr10 27730661 27730848 -117858440 + MER20 DNA MER1_type 7 204 -15 2019 129 0 72 chr10 27731621 27731984 -117857304 + MER1B DNA MER1_type 1 337 0 2195 99 0 13 chr10 27732005 27732308 -117856980 + AluSx SINE Alu 1 299 -13 1008 190 57 14 chr10 27733074 27733285 -117856003 + AluJb SINE Alu 83 302 -10 187 98 0 49 chr10 27733338 27733379 -117855909 + (GGGAA)n Simple_repeat Simple_repeat 4 42 0 216 0 0 0 chr10 27733523 27733547 -117855741 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1485 178 0 22 chr10 27733553 27733822 -117855466 - AluJo SINE Alu -39 273 11 1964 118 3 10 chr10 27733905 27734202 -117855086 + AluSq SINE Alu 3 297 -16 244 200 0 0 chr10 27734443 27734493 -117854795 + (TG)n Simple_repeat Simple_repeat 2 51 0 1734 185 150 70 chr10 27734707 27735167 -117854121 - MLT1D LTR MaLR -4 501 5 1913 100 0 85 chr10 27735567 27735898 -117853390 - AluSx SINE Alu -7 305 3 364 264 81 47 chr10 27736129 27736277 -117853011 - MIR SINE MIR -27 235 83 2306 80 6 10 chr10 27737139 27737452 -117851836 + AluSq SINE Alu 1 312 -1 378 279 23 45 chr10 27737454 27737586 -117851702 - MIR SINE MIR -59 149 20 707 319 5 14 chr10 27737653 27737863 -117851425 + MIR SINE MIR 23 230 -32 2179 101 0 3 chr10 27737975 27738271 -117851017 - AluSx SINE Alu -17 295 1 356 224 40 0 chr10 27738703 27738779 -117850509 - L3 LINE CR1 -3 1574 1496 886 168 7 0 chr10 27739212 27739367 -117849921 - FRAM SINE Alu -13 163 8 2291 105 0 0 chr10 27739385 27739698 -117849590 - AluSq SINE Alu 0 313 1 213 312 11 11 chr10 27740184 27740277 -117849011 - L2 LINE L2 -39 3274 3182 314 295 41 16 chr10 27740471 27740593 -117848695 + MIR SINE MIR 126 250 -12 1907 114 22 0 chr10 27740823 27741096 -117848192 + AluSx SINE Alu 1 279 -33 417 20 0 0 chr10 27741096 27741146 -117848142 + (CA)n Simple_repeat Simple_repeat 1 50 0 200 238 0 79 chr10 27742671 27742734 -117846554 - L2 LINE L2 -87 3226 3169 641 354 23 4 chr10 27742760 27743020 -117846268 - L2 LINE L2 -223 3090 2826 31 26 0 0 chr10 27743449 27743487 -117845801 + AT_rich Low_complexity Low_complexity 1 38 0 1673 147 0 0 chr10 27743585 27743844 -117845444 + AluSx SINE Alu 39 297 -15 2254 62 0 36 chr10 27743851 27744156 -117845132 + AluY SINE Alu 5 298 -13 305 309 98 0 chr10 27744349 27744472 -117844816 - L3 LINE CR1 -140 1437 1303 2259 52 0 21 chr10 27745067 27745383 -117843905 - AluY SINE Alu 0 310 1 310 293 7 71 chr10 27745437 27745577 -117843711 - L3 LINE CR1 -404 1173 1043 4695 144 20 45 chr10 27747111 27747967 -117841321 + L1MB3 LINE L1 5287 6163 -20 2312 102 0 3 chr10 27747967 27748281 -117841007 + AluSq SINE Alu 1 313 0 1537 39 10 34 chr10 27748284 27748490 -117840798 + L1PA10 LINE L1 5968 6168 0 4695 144 20 45 chr10 27748490 27748540 -117840748 + L1MB3 LINE L1 6165 6174 -9 2166 87 7 20 chr10 27748540 27748839 -117840449 - AluSq SINE Alu -18 295 1 195 321 56 51 chr10 27749894 27750066 -117839222 - L2 LINE L2 -162 3110 2935 4103 77 71 6 chr10 27750066 27750586 -117838702 - MER41A LTR ERV1 0 554 1 195 321 56 51 chr10 27750586 27750609 -117838679 - L2 LINE L2 -337 2935 2914 2431 99 0 0 chr10 27750711 27751023 -117838265 + AluSx SINE Alu 1 312 0 4579 149 65 11 chr10 27751061 27751804 -117837484 - LTR39 LTR ERV1 0 783 1 1908 96 4 0 chr10 27752181 27752432 -117836856 - AluSx SINE Alu -32 280 29 1296 187 79 18 chr10 27753127 27753405 -117835883 - AluJo SINE Alu -17 295 1 2217 88 6 64 chr10 27753966 27754296 -117834992 - AluY SINE Alu 0 311 1 676 278 110 0 chr10 27754440 27754613 -117834675 + MIR SINE MIR 29 220 -42 313 260 58 10 chr10 27754759 27754863 -117834425 - L1ME LINE L1 -492 5629 5521 2301 105 0 26 chr10 27755436 27755749 -117833539 - AluSx SINE Alu -7 305 1 2165 111 3 10 chr10 27755758 27756056 -117833232 - AluSp SINE Alu -17 296 1 24 32 0 0 chr10 27756202 27756233 -117833055 + AT_rich Low_complexity Low_complexity 1 31 0 1766 96 15 165 chr10 27756969 27757141 -117832147 - MER1B DNA MER1_type -2377 335 253 1857 109 4 0 chr10 27757141 27757398 -117831890 - AluSx SINE Alu -17 295 38 1766 96 15 165 chr10 27757398 27757619 -117831669 - MER1B DNA MER1_type -2459 253 1 913 284 210 23 chr10 27757699 27758750 -117830538 - L2 LINE L2 -502 2812 1565 411 83 0 0 chr10 27758759 27758819 -117830469 + (GGAA)n Simple_repeat Simple_repeat 1 60 0 182 291 0 0 chr10 27759075 27759130 -117830158 - L3b LINE CR1 0 1583 1529 3476 189 52 87 chr10 27759142 27760167 -117829121 - L1MC4 LINE L1 -1 8041 7053 2160 119 3 0 chr10 27760194 27760489 -117828799 + AluSx SINE Alu 1 296 -16 292 204 0 91 chr10 27761171 27761259 -117828029 - MIR SINE MIR 0 262 183 193 306 20 0 chr10 27761371 27761420 -117827868 - MIR SINE MIR -165 97 48 4435 164 39 42 chr10 27761459 27761911 -117827377 - L1MB3 LINE L1 -2 6181 5729 2286 115 0 13 chr10 27761911 27762216 -117827072 - AluSx SINE Alu -11 301 1 4435 164 39 42 chr10 27762216 27762980 -117826308 - L1MB3 LINE L1 -454 5729 4976 497 296 96 58 chr10 27763162 27763446 -117825842 - L1ME4a LINE L1 -178 5943 5632 2213 101 7 0 chr10 27763446 27763742 -117825546 + AluSx SINE Alu 1 298 -14 497 296 96 58 chr10 27763742 27763933 -117825355 - L1ME4a LINE L1 -489 5632 5450 962 83 8 30 chr10 27763994 27764127 -117825161 - L1MA1 LINE L1 -1 6301 6172 896 230 9 14 chr10 27764498 27764711 -117824577 - L1MB3 LINE L1 -2500 3646 3435 247 352 55 0 chr10 27764715 27764843 -117824445 - L1ME4a LINE L1 -2061 4085 3951 266 250 0 16 chr10 27764846 27764910 -117824378 + CT-rich Low_complexity Low_complexity 2 64 0 450 291 124 37 chr10 27764911 27765892 -117823396 - L1ME4a LINE L1 -2201 3945 2879 241 323 75 11 chr10 27767050 27767143 -117822145 + MIR SINE MIR 9 107 -155 314 322 120 19 chr10 27767203 27767411 -117821877 - MIR SINE MIR -10 252 24 2281 67 13 10 chr10 27767411 27767709 -117821579 - AluY SINE Alu -12 299 1 191 333 56 0 chr10 27767740 27767812 -117821476 + MIR SINE MIR 108 183 -79 2280 101 0 3 chr10 27768304 27768601 -117820687 - AluSc SINE Alu -13 296 1 248 311 0 0 chr10 27769140 27769214 -117820074 + MER5A DNA MER1_type 7 80 -109 507 250 66 40 chr10 27769216 27769368 -117819920 + L2 LINE L2 3158 3313 0 356 269 83 9 chr10 27769366 27769474 -117819814 + MER5A DNA MER1_type 71 186 -3 * 208 250 0 0 chr10 27769616 27769664 -117819624 - L2 LINE L2 -4 3309 3262 326 190 70 73 chr10 27770023 27770132 -117819156 + MIR3 SINE MIR 74 183 -25 606 254 111 29 chr10 27770793 27771073 -117818215 - MER20B DNA MER1_type 0 783 481 236 180 0 40 chr10 27771114 27771164 -117818124 - MER20B DNA MER1_type -669 114 67 2624 47 0 0 chr10 27771285 27771584 -117817704 + AluY SINE Alu 1 299 -12 229 232 87 14 chr10 27774526 27774595 -117814693 + MER5C DNA MER1_type 2 75 -249 2240 114 0 0 chr10 27774860 27775158 -117814130 - AluSx SINE Alu -14 298 1 183 167 0 0 chr10 27775308 27775338 -117813950 - MIR SINE MIR -59 149 120 2409 99 0 0 chr10 27775680 27775984 -117813304 + AluSq SINE Alu 1 304 -9 21 0 0 0 chr10 27777193 27777214 -117812074 + AT_rich Low_complexity Low_complexity 1 21 0 1480 145 58 58 chr10 27778978 27779288 -117810000 + AluJo SINE Alu 1 310 -2 2234 108 3 19 chr10 27779469 27779785 -117809503 - AluSx SINE Alu -1 311 1 269 352 85 77 chr10 27779975 27780353 -117808935 - L2 LINE L2 -21 3251 2871 21 0 0 0 chr10 27781088 27781109 -117808179 + AT_rich Low_complexity Low_complexity 1 21 0 734 226 198 19 chr10 27781458 27781670 -117807618 - MIR SINE MIR -3 259 10 24 0 0 0 chr10 27782734 27782758 -117806530 + AT_rich Low_complexity Low_complexity 1 24 0 1807 151 169 20 chr10 27783325 27783675 -117805613 - MER4A LTR ERV1 0 664 263 611 103 21 10 chr10 27783675 27783772 -117805516 - MER4A LTR ERV1 -566 98 1 1001 149 0 0 chr10 27783814 27783962 -117805326 + L1PB4 LINE L1 5996 6143 -13 29 0 0 0 chr10 27783962 27783991 -117805297 + AT_rich Low_complexity Low_complexity 1 29 0 866 271 72 11 chr10 27784261 27784538 -117804750 - HAL1 LINE L1 -1796 711 418 189 333 92 46 chr10 27784848 27785043 -117804245 - L3 LINE CR1 -641 936 733 2054 148 0 0 chr10 27785044 27785341 -117803947 - AluSx SINE Alu -15 297 1 695 256 136 55 chr10 27785376 27785869 -117803419 - L1ME4a LINE L1 -1 6120 5588 352 277 192 11 chr10 27785877 27786054 -117803234 - L3 LINE CR1 -872 705 497 1079 320 97 82 chr10 27786114 27787243 -117802045 + L3 LINE CR1 429 1574 -3 305 305 40 20 chr10 27787330 27787481 -117801807 + MER103 DNA DNA 11 164 -2 2345 86 7 7 chr10 27787663 27787967 -117801321 - AluY SINE Alu -7 304 1 3086 118 7 16 chr10 27790452 27790901 -117798387 - MER65A LTR ERV1 0 445 1 890 97 0 0 chr10 27792892 27793005 -117796283 - AluSg/x SINE Alu -13 299 187 21 0 0 0 chr10 27793257 27793278 -117796010 + AT_rich Low_complexity Low_complexity 1 21 0 195 300 118 27 chr10 27793628 27793738 -117795550 - L2 LINE L2 -672 2642 2523 2426 96 0 0 chr10 27796264 27796576 -117792712 - AluSx SINE Alu 0 312 1 298 325 91 20 chr10 27796875 27797072 -117792216 - MIR SINE MIR 0 262 52 452 322 41 6 chr10 27797540 27797711 -117791577 + MER5B DNA MER1_type 2 178 0 366 80 0 0 chr10 27798597 27798647 -117790641 + (CA)n Simple_repeat Simple_repeat 1 50 0 1005 186 35 30 chr10 27798680 27798879 -117790409 - MER3 DNA MER1_type 0 209 10 1856 172 82 18 chr10 27799063 27799406 -117789882 - MLT1A1 LTR MaLR 0 365 1 2109 114 0 39 chr10 27800019 27800325 -117788963 - AluSx SINE Alu -18 294 1 3650 150 105 0 chr10 27800774 27801381 -117787907 - LTR51 LTR ERV1 0 671 1 180 310 37 132 chr10 27802666 27803021 -117786267 - L2 LINE L2 -11 3261 2941 21 82 0 0 chr10 27804534 27804583 -117784705 + AT_rich Low_complexity Low_complexity 1 49 0 545 103 0 11 chr10 27806535 27806622 -117782666 + (GGGA)n Simple_repeat Simple_repeat 4 89 0 407 218 62 38 chr10 27807871 27808040 -117781248 - L1MD3 LINE L1 0 7995 7772 1158 147 0 0 chr10 27808068 27808238 -117781050 - AluSg/x SINE Alu -9 303 134 2245 105 0 7 chr10 27808238 27808544 -117780744 - AluSx SINE Alu -8 304 1 263 195 0 49 chr10 27808570 27808652 -117780636 - L1MC5 LINE L1 -279 7682 7605 555 308 81 9 chr10 27809238 27809362 -117779926 + MIR SINE MIR 17 131 -131 4000 94 59 0 chr10 27809362 27809885 -117779403 + MER41A LTR ERV1 1 554 0 555 308 81 9 chr10 27809885 27809981 -117779307 + MIR SINE MIR 131 253 -9 188 184 20 0 chr10 27810396 27810445 -117778843 + (TA)n Simple_repeat Simple_repeat 1 50 0 3176 102 13 55 chr10 27810898 27811564 -117777724 + LTR8A LTR ERV1 1 727 0 3082 126 53 25 chr10 27812063 27812660 -117776628 - MER4B LTR ERV1 0 779 1 2015 136 13 7 chr10 27814292 27814593 -117774695 + AluJb SINE Alu 1 303 -9 851 236 15 15 chr10 27814738 27814937 -117774351 + MIR SINE MIR 33 231 -31 1455 178 36 77 chr10 27815430 27815709 -117773579 + MLT1A1 LTR MaLR 16 278 -87 1519 199 28 7 chr10 27815709 27815995 -117773293 + AluJo SINE Alu 1 292 -20 1455 178 36 77 chr10 27815995 27816080 -117773208 + MLT1A1 LTR MaLR 278 365 0 510 17 0 0 chr10 27816147 27816206 -117773082 + (CA)n Simple_repeat Simple_repeat 2 60 0 324 0 0 0 chr10 27816868 27816904 -117772384 + (TG)n Simple_repeat Simple_repeat 1 36 0 1726 141 64 7 chr10 27818033 27818316 -117770972 - AluSx SINE Alu -13 299 1 2178 112 0 3 chr10 27818682 27818994 -117770294 + AluSx SINE Alu 1 311 -1 1585 178 24 21 chr10 27819468 27819755 -117769533 - AluJb SINE Alu -22 290 3 2468 76 3 0 chr10 27820701 27821003 -117768285 - AluSp SINE Alu -10 303 1 256 277 146 36 chr10 27821267 27821404 -117767884 - L2 LINE L2 0 3313 3162 1165 149 0 5 chr10 27821419 27821614 -117767674 + L1MA6 LINE L1 6107 6300 0 553 164 17 0 chr10 27821616 27821732 -117767556 + GA-rich Low_complexity Low_complexity 3 120 0 294 262 33 49 chr10 27822276 27822398 -117766890 - L2 LINE L2 -634 2680 2561 248 203 142 35 chr10 27823501 27823698 -117765590 + HAL1 LINE L1 1066 1283 -1224 898 148 49 0 chr10 27823700 27823842 -117765446 + L1PB3 LINE L1 5998 6146 -8 21 57 0 0 chr10 27823842 27823877 -117765411 + AT_rich Low_complexity Low_complexity 1 35 0 588 182 27 9 chr10 27823886 27823996 -117765292 + FLAM_A SINE Alu 11 122 -20 2384 96 0 3 chr10 27824004 27824307 -117764981 + AluSp SINE Alu 1 302 -11 280 300 108 42 chr10 27824407 27824740 -117764548 + L1MEd LINE L1 11 365 -5754 1546 264 90 26 chr10 27824742 27825328 -117763960 - L2 LINE L2 -2595 719 96 3631 95 2 12 chr10 27825613 27825971 -117763317 - L1PB1 LINE L1 -1 6150 5797 450 0 0 0 chr10 27825971 27826021 -117763267 + (TG)n Simple_repeat Simple_repeat 1 50 0 3631 95 2 12 chr10 27826021 27826155 -117763133 - L1PB1 LINE L1 -354 5797 5663 2115 145 3 0 chr10 27826669 27826980 -117762308 + AluSx SINE Alu 1 312 0 180 0 0 0 chr10 27827904 27827924 -117761364 + (TA)n Simple_repeat Simple_repeat 2 21 0 416 315 19 56 chr10 27828013 27828114 -117761174 - L1ME LINE L1 -389 5732 5642 2004 147 0 16 chr10 27828114 27828289 -117760999 - AluJb SINE Alu -3 309 140 1908 113 28 14 chr10 27828289 27828580 -117760708 - AluSq SINE Alu -18 295 1 2004 147 0 16 chr10 27828580 27828718 -117760570 - AluJb SINE Alu -172 140 1 416 315 19 56 chr10 27828718 27828829 -117760459 - L1ME LINE L1 -479 5642 5528 335 174 12 0 chr10 27829540 27829626 -117759662 + (TA)n Simple_repeat Simple_repeat 2 88 0 2636 155 8 0 chr10 27830002 27830402 -117758886 - MER57A LTR ERV1 0 403 1 298 312 85 21 chr10 27830880 27831021 -117758267 - MIR3 SINE MIR -31 177 28 387 263 39 90 chr10 27831858 27832113 -117757175 - L1M4 LINE L1 -3095 3233 2992 6360 92 14 52 chr10 27832139 27833293 -117755995 + L1PA10 LINE L1 5049 6166 -2 221 194 0 32 chr10 27833425 27833487 -117755801 + (TATATG)n Simple_repeat Simple_repeat 5 64 0 453 273 16 16 chr10 27833607 27833728 -117755560 + L2 LINE L2 3190 3310 -3 354 247 72 0 chr10 27833961 27834058 -117755230 + MER91C DNA MER1_type 36 139 -1 294 29 0 0 chr10 27834219 27834254 -117755034 + (TC)n Simple_repeat Simple_repeat 1 35 0 4562 80 102 2 chr10 27835214 27835814 -117753474 + PABL_A LTR ERV1 1 660 0 5132 104 10 18 chr10 27835815 27836546 -117752742 + PABL_A-int LTR ERV1 2 726 -4289 576 52 0 0 chr10 27836547 27836624 -117752664 - Alu SINE Alu -3 306 230 1487 43 0 16 chr10 27836624 27836810 -117752478 + PABL_A-int LTR ERV1 717 899 -4116 * 3826 63 2 4 chr10 27836802 27837306 -117751982 + PABL_A-int LTR ERV1 1151 1653 -3362 907 156 271 0 chr10 27837306 27837505 -117751783 - LTR8 LTR ERV1 -438 253 1 1356 42 47 5 chr10 27837505 27837696 -117751592 + PABL_A-int LTR ERV1 1862 2060 -2955 5257 229 29 12 chr10 27837696 27839014 -117750274 - L1M4 LINE L1 -4066 1262 14 676 127 59 34 chr10 27839590 27839708 -117749580 + FLAM_C SINE Alu 13 133 -10 1741 111 88 50 chr10 27839714 27840011 -117749277 - AluSx SINE Alu -4 308 1 347 252 137 8 chr10 27840372 27840503 -117748785 + L2 LINE L2 3158 3305 -8 2981 181 22 67 chr10 27840790 27841431 -117747857 - LTR9 LTR ERV1 0 612 1 6198 120 3 1 chr10 27841615 27842559 -117746729 + L1PA13 LINE L1 5215 6163 0 1457 158 10 86 chr10 27843088 27843352 -117745936 + MSTA LTR MaLR 148 388 -40 1927 150 7 0 chr10 27843352 27843645 -117745643 - AluSx SINE Alu -17 295 1 1457 158 10 86 chr10 27843645 27843684 -117745604 + MSTA LTR MaLR 388 428 0 710 265 31 6 chr10 27844587 27844922 -117744366 + FRAM SINE Alu 1 203 0 678 153 0 48 chr10 27844892 27845081 -117744207 + GA-rich Low_complexity Low_complexity 1 180 0 841 161 0 17 chr10 27845121 27845301 -117743987 + GA-rich Low_complexity Low_complexity 4 180 0 315 164 0 0 chr10 27846356 27846417 -117742871 + (CA)n Simple_repeat Simple_repeat 2 62 0 1079 116 46 0 chr10 27847304 27847477 -117741811 + L1MA4 LINE L1 6115 6295 -5 23 0 0 0 chr10 27847575 27847598 -117741690 + AT_rich Low_complexity Low_complexity 1 23 0 222 292 0 0 chr10 27847604 27847652 -117741636 - MIR SINE MIR -4 258 211 2256 76 20 17 chr10 27847960 27847983 -117741305 - AluSc SINE Alu -6 303 282 531 0 0 0 chr10 27847983 27848042 -117741246 + (TATG)n Simple_repeat Simple_repeat 2 60 0 2256 76 20 17 chr10 27848042 27848320 -117740968 - AluSc SINE Alu -27 282 1 383 314 39 76 chr10 27848320 27848804 -117740484 - L1M4 LINE L1 -939 5207 4742 439 316 46 0 chr10 27848841 27848993 -117740295 - MIR SINE MIR -102 160 2 882 70 0 31 chr10 27848999 27849128 -117740160 + AluY SINE Alu 187 311 0 21 36 0 0 chr10 27849199 27849227 -117740061 + AT_rich Low_complexity Low_complexity 1 28 0 1835 141 48 0 chr10 27849306 27849596 -117739692 + AluSx SINE Alu 1 304 -8 754 300 50 27 chr10 27849800 27850240 -117739048 - L1M4 LINE L1 -2027 4119 3670 198 278 19 0 chr10 27851475 27851529 -117737759 - L2 LINE L2 -575 2739 2685 3932 94 53 22 chr10 27851530 27852598 -117736690 + MER11A LTR ERVK 1 1266 0 222 361 98 15 chr10 27853127 27853332 -117735956 + L2 LINE L2 2643 2864 -450 2183 103 4 0 chr10 27853561 27853871 -117735417 - AluY SINE Alu 0 311 1 2232 112 0 0 chr10 27853873 27854167 -117735121 - AluSg SINE Alu -16 294 1 225 271 33 90 chr10 27854184 27854306 -117734982 - MLT1K LTR MaLR -286 302 188 684 174 16 16 chr10 27854498 27854619 -117734669 + MER2 DNA MER2_type 1 121 -224 189 0 0 0 chr10 27854619 27854640 -117734648 + (TA)n Simple_repeat Simple_repeat 2 22 0 686 132 70 18 chr10 27854640 27854754 -117734534 - FLAM_C SINE Alu -13 130 11 526 143 0 0 chr10 27854763 27854854 -117734434 + MER2 DNA MER2_type 120 210 -135 2747 113 60 21 chr10 27855528 27855961 -117733327 + LTR7 LTR ERV1 1 450 0 411 21 0 0 chr10 27856644 27856692 -117732596 + (GA)n Simple_repeat Simple_repeat 1 48 0 1383 202 67 5 chr10 27858338 27858764 -117730524 + MLT1D LTR MaLR 1 491 -14 990 204 58 119 chr10 27858774 27859151 -117730137 - MLT1A1 LTR MaLR -11 354 1 571 164 82 9 chr10 27859160 27859270 -117730018 + MLT1D-int LTR MaLR 2 119 -1252 1231 251 130 14 chr10 27859641 27860063 -117729225 + MER20B DNA MER1_type 124 594 -189 434 123 86 12 chr10 27860061 27860142 -117729146 - LTR52 LTR ERVL -29 392 306 * 5242 132 19 12 chr10 27860143 27860949 -117728339 + L1MC2 LINE L1 5532 6342 -2 434 300 130 22 chr10 27861013 27861290 -117727998 + L1MC/D LINE L1 5283 5589 -2219 551 240 8 8 chr10 27861290 27861411 -117727877 - MLT1E LTR MaLR 0 593 473 1667 228 39 3 chr10 27861423 27861969 -117727319 + Charlie1 DNA MER1_type 1817 2454 -307 206 130 19 37 chr10 27863608 27863662 -117725626 + (TTTG)n Simple_repeat Simple_repeat 3 55 0 597 190 0 17 chr10 27865417 27865533 -117723755 - AluSg/x SINE Alu -2 310 197 3086 118 7 16 chr10 27868092 27868541 -117720747 - MER65A LTR ERV1 0 445 1 890 97 0 0 chr10 27870532 27870645 -117718643 - AluSg/x SINE Alu -13 299 187 21 0 0 0 chr10 27870897 27870918 -117718370 + AT_rich Low_complexity Low_complexity 1 21 0 195 300 118 27 chr10 27871268 27871378 -117717910 - L2 LINE L2 -672 2642 2523 2426 96 0 0 chr10 27873904 27874216 -117715072 - AluSx SINE Alu 0 312 1 298 325 91 20 chr10 27874515 27874712 -117714576 - MIR SINE MIR 0 262 52 440 328 41 6 chr10 27875180 27875351 -117713937 + MER5B DNA MER1_type 2 178 0 366 80 0 0 chr10 27876237 27876287 -117713001 + (CA)n Simple_repeat Simple_repeat 1 50 0 1005 186 35 30 chr10 27876320 27876519 -117712769 - MER3 DNA MER1_type 0 209 10 1540 184 87 19 chr10 27876703 27877024 -117712264 - MLT1A1 LTR MaLR 0 365 23 963 280 224 19 chr10 27877031 27877966 -117711322 + L2 LINE L2 1687 2812 -502 1766 96 15 165 chr10 27878046 27878267 -117711021 + MER1B DNA MER1_type 1 139 -2573 1857 109 4 0 chr10 27878267 27878524 -117710764 + AluSx SINE Alu 38 295 -17 1766 96 15 165 chr10 27878524 27878696 -117710592 + MER1B DNA MER1_type 139 335 -4 24 32 0 0 chr10 27879432 27879463 -117709825 + AT_rich Low_complexity Low_complexity 1 31 0 2165 111 3 10 chr10 27879609 27879907 -117709381 + AluSp SINE Alu 1 296 -17 2301 105 0 26 chr10 27879916 27880229 -117709059 + AluSx SINE Alu 1 305 -7 313 260 58 10 chr10 27880802 27880906 -117708382 + L1ME LINE L1 5521 5629 -492 676 278 110 0 chr10 27881052 27881225 -117708063 - MIR SINE MIR -42 220 29 2190 91 6 64 chr10 27881369 27881699 -117707589 + AluY SINE Alu 1 311 0 1296 187 79 18 chr10 27882260 27882538 -117706750 + AluJo SINE Alu 1 295 -17 1908 96 4 0 chr10 27883233 27883484 -117705804 + AluSx SINE Alu 29 280 -32 2241 170 104 18 chr10 27883861 27884314 -117704974 + LTR39 LTR ERV1 1 492 -291 777 172 16 0 chr10 27885066 27885194 -117704094 - FLAM_C SINE Alu -3 130 1 1766 180 0 0 chr10 27885862 27886140 -117703148 + AluSx SINE Alu 3 280 -32 325 151 14 14 chr10 27886142 27886215 -117703073 + GA-rich Low_complexity Low_complexity 3 75 0 6169 33 30 3 chr10 27886693 27887417 -117701871 - L1PA3 LINE L1 0 6155 5412 2684 66 22 19 chr10 27888240 27888602 -117700686 + L1PA11 LINE L1 5686 6048 -126 397 87 0 29 chr10 27888904 27888973 -117700315 + (GGAA)n Simple_repeat Simple_repeat 2 68 0 494 330 110 42 chr10 27888977 27889694 -117699594 - L1 LINE L1 -1098 5048 4283 723 243 119 5 chr10 27889782 27889967 -117699321 + MER58A DNA MER1_type 19 224 0 648 332 55 7 chr10 27890017 27890464 -117698824 - L1 LINE L1 -2013 4133 3666 1666 183 0 30 chr10 27890909 27891210 -117698078 + AluJo SINE Alu 1 292 -20 2019 66 8 0 chr10 27891495 27891739 -117697549 - L1PA8 LINE L1 -15 6157 5912 412 274 65 38 chr10 27892095 27892152 -117697136 - MIR SINE MIR -29 233 179 1726 182 0 26 chr10 27892152 27892460 -117696828 - AluJo SINE Alu -10 302 3 412 274 65 38 chr10 27892460 27892588 -117696700 - MIR SINE MIR -83 179 43 369 217 76 131 chr10 27893129 27893191 -117696097 + LTR41 LTR ERVL 1 65 -708 3727 183 13 37 chr10 27893191 27893956 -117695332 - L1MB8 LINE L1 0 6178 5432 369 217 76 131 chr10 27893956 27894091 -117695197 + LTR41 LTR ERVL 65 187 -586 314 228 84 109 chr10 27894350 27894473 -117694815 + LTR41 LTR ERVL 586 690 -105 1032 147 70 0 chr10 27894473 27894630 -117694658 - FAM SINE Alu -7 168 1 314 228 84 109 chr10 27894630 27894734 -117694554 + LTR41 LTR ERVL 690 795 0 30 0 0 0 chr10 27895797 27895827 -117693461 + AT_rich Low_complexity Low_complexity 1 30 0 270 304 140 14 chr10 27896004 27896218 -117693070 + MIR SINE MIR 20 260 -2 1107 197 38 94 chr10 27896488 27896837 -117692451 + MLT1B LTR MaLR 1 321 -69 5783 145 25 16 chr10 27897581 27898541 -117690747 - LTR5 LTR ERVK 0 969 1 497 267 62 14 chr10 27901975 27902121 -117687167 - L2 LINE L2 -1 3312 3160 270 287 23 0 chr10 27902259 27902346 -117686942 - MER117 DNA MER1_type -64 133 45 1700 218 0 15 chr10 27902408 27902738 -117686550 + MLT1A1 LTR MaLR 1 325 -40 968 133 144 6 chr10 27902738 27902919 -117686369 + MSTA LTR MaLR 1 206 -222 2316 149 56 30 chr10 27902920 27903438 -117685850 - MLT2A2 LTR ERVL 0 554 1 1002 153 139 20 chr10 27903438 27903640 -117685648 + MSTA LTR MaLR 203 428 0 377 67 0 0 chr10 27903640 27903685 -117685603 + MLT1A1 LTR MaLR 321 365 0 2374 95 0 0 chr10 27904189 27904495 -117684793 - AluSg SINE Alu -4 306 1 1999 113 42 0 chr10 27905800 27906084 -117683204 + AluSx SINE Alu 1 296 -16 36 0 0 0 chr10 27906146 27906182 -117683106 + AT_rich Low_complexity Low_complexity 1 36 0 988 114 11 86 chr10 27906352 27906554 -117682734 - AluSg/x SINE Alu 0 310 132 1584 161 0 8 chr10 27906554 27906809 -117682479 - AluSx SINE Alu -22 290 38 1924 146 13 3 chr10 27908104 27908413 -117680875 + AluJb SINE Alu 1 312 0 2554 42 0 10 chr10 27908548 27908855 -117680433 + AluY SINE Alu 1 304 -7 186 43 0 0 chr10 27909232 27909255 -117680033 + (TG)n Simple_repeat Simple_repeat 2 24 0 774 150 45 0 chr10 27910100 27910233 -117679055 - MER2 DNA MER2_type -25 320 182 4523 99 55 68 chr10 27910289 27910726 -117678562 + L1MA4A LINE L1 5362 5785 -518 2196 125 3 0 chr10 27910726 27911031 -117678257 + AluSg SINE Alu 1 306 -4 4523 99 55 68 chr10 27911031 27911381 -117677907 + L1MA4A LINE L1 5785 6138 -165 2097 101 0 0 chr10 27911481 27911748 -117677540 - AluSg SINE Alu -43 267 1 2083 113 0 30 chr10 27912269 27912570 -117676718 + AluSx SINE Alu 1 292 -20 1839 181 7 0 chr10 27912750 27913059 -117676229 - AluJb SINE Alu -1 311 1 458 129 0 0 chr10 27913365 27913435 -117675853 - Alu SINE Alu -1 309 240 * 615 222 0 22 chr10 27913430 27913565 -117675723 + AluY SINE Alu 98 229 -82 1674 91 0 0 chr10 27914059 27914269 -117675019 + AluSg/x SINE Alu 80 289 -21 342 188 139 30 chr10 27914274 27914375 -117674913 + L1MC5 LINE L1 7646 7757 -204 1582 183 0 14 chr10 27914542 27914831 -117674457 - AluJo SINE Alu -14 298 14 25 31 0 0 chr10 27914870 27914902 -117674386 + AT_rich Low_complexity Low_complexity 1 32 0 3640 109 103 26 chr10 27915913 27916959 -117672329 + MER11A LTR ERVK 1 1232 -4 208 231 77 0 chr10 27917509 27917574 -117671714 + L2 LINE L2 3244 3313 0 916 179 109 10 chr10 27917757 27917958 -117671330 + AluJo SINE Alu 85 305 -7 233 88 0 0 chr10 27918306 27918340 -117670948 - L1P LINE L1 -879 5287 5254 * 6629 206 9 10 chr10 27918311 27919706 -117669582 - L1 LINE L1 -864 5282 3889 1756 143 3 40 chr10 27919834 27920134 -117669154 + AluJo SINE Alu 1 289 -23 325 91 0 254 chr10 27920462 27920572 -117668716 - L1MA10 LINE L1 -2 6332 6251 21 0 0 0 chr10 27921094 27921115 -117668173 + GC_rich Low_complexity Low_complexity 1 21 0 1362 180 112 25 chr10 27921753 27922031 -117667257 - AluJo SINE Alu 0 302 1 1284 148 5 0 chr10 27922244 27922440 -117666848 - AluSg/x SINE Alu -16 296 100 282 29 0 0 chr10 27922907 27922942 -117666346 + (CA)n Simple_repeat Simple_repeat 2 36 0 1624 166 34 88 chr10 27923047 27923146 -117666142 + MLT1A1 LTR MaLR 1 104 -261 2306 132 24 32 chr10 27923146 27923524 -117665764 - THE1C LTR MaLR 0 375 1 1624 166 34 88 chr10 27923524 27923703 -117665585 + MLT1A1 LTR MaLR 104 255 -110 2627 190 34 58 chr10 27923703 27924329 -117664959 + LTR9 LTR ERV1 2 612 0 1624 166 34 88 chr10 27924329 27924435 -117664853 + MLT1A1 LTR MaLR 255 365 0 243 0 0 0 chr10 27924584 27924611 -117664677 + (TG)n Simple_repeat Simple_repeat 2 28 0 2043 86 27 38 chr10 27924611 27924903 -117664385 - AluY SINE Alu -22 289 1 382 259 107 56 chr10 27924903 27925119 -117664169 - MIR SINE MIR -13 249 23 5806 65 0 0 chr10 27925605 27926301 -117662987 + L1PA5 LINE L1 5453 6148 -6 2227 123 0 0 chr10 27926463 27926771 -117662517 - AluSx SINE Alu 0 312 5 2287 65 0 0 chr10 27927258 27927533 -117661755 - L1PA5 LINE L1 -1 6153 5879 810 42 0 0 chr10 27927534 27927630 -117661658 + L1PA5 LINE L1 5794 5889 -265 457 277 90 86 chr10 27927918 27927945 -117661343 + L2 LINE L2 1727 1752 -1562 1463 209 11 4 chr10 27927945 27928223 -117661065 - AluJo SINE Alu -32 280 1 457 277 90 86 chr10 27928223 27928718 -117660570 + L2 LINE L2 1752 2251 -1063 656 305 71 20 chr10 27928865 27929160 -117660128 - HERV16 LTR ERVL -4685 311 2 1435 249 26 13 chr10 27929162 27929548 -117659740 - LTR16A LTR ERVL -1 449 59 341 222 170 46 chr10 27929585 27929738 -117659550 + MIR SINE MIR 91 262 0 25 0 0 0 chr10 27929760 27929785 -117659503 + AT_rich Low_complexity Low_complexity 1 25 0 2397 93 0 0 chr10 27929844 27930154 -117659134 - AluY SINE Alu -1 310 1 181 250 76 76 chr10 27930176 27930268 -117659020 + L2 LINE L2 3124 3215 -98 495 289 31 31 chr10 27930377 27930605 -117658683 + L2 LINE L2 567 794 -2520 292 200 24 40 chr10 27931565 27931690 -117657598 + (TA)n Simple_repeat Simple_repeat 1 123 0 3591 75 10 20 chr10 27931873 27932382 -117656906 + L1PA8 LINE L1 5594 6097 -75 332 293 71 87 chr10 27932526 27932862 -117656426 - L1MC/D LINE L1 -2054 5754 5427 5201 81 6 0 chr10 27932862 27933520 -117655768 + L1PA8 LINE L1 5511 6172 0 332 293 71 87 chr10 27933520 27933691 -117655597 - L1MC/D LINE L1 -2381 5427 5255 32 43 0 0 chr10 27933985 27934031 -117655257 + AT_rich Low_complexity Low_complexity 1 46 0 230 81 27 0 chr10 27934041 27934078 -117655210 + (TCTA)n Simple_repeat Simple_repeat 1 38 0 1013 233 173 67 chr10 27934105 27934435 -117654853 - MSTD LTR MaLR 0 396 1 25 0 0 0 chr10 27935065 27935090 -117654198 + AT_rich Low_complexity Low_complexity 1 25 0 469 332 48 34 chr10 27935101 27935577 -117653711 - L1MC/D LINE L1 -2006 4140 3658 972 166 0 0 chr10 27936006 27936157 -117653131 + FAM SINE Alu 20 170 -15 24 0 0 0 chr10 27936212 27936236 -117653052 + AT_rich Low_complexity Low_complexity 1 24 0 318 233 217 0 chr10 27937053 27937182 -117652106 + L1MCc LINE L1 1378 1534 -4889 243 294 99 41 chr10 27937419 27937640 -117651648 + L1MCc LINE L1 1773 2006 -4925 1856 159 0 0 chr10 27937640 27937917 -117651371 + AluSx SINE Alu 1 277 -35 369 0 0 0 chr10 27937921 27937962 -117651326 + (TAAA)n Simple_repeat Simple_repeat 1 41 0 226 214 0 36 chr10 27937974 27938030 -117651258 + L1MCc LINE L1 2026 2079 -5043 571 217 37 56 chr10 27938195 27938356 -117650932 - MER5B DNA MER1_type -4 174 17 1904 152 0 34 chr10 27938655 27938978 -117650310 + AluSx SINE Alu 1 312 0 364 200 211 0 chr10 27939434 27939529 -117649759 + L1MA8 LINE L1 5989 6103 -188 1085 141 6 0 chr10 27939529 27939692 -117649596 + FRAM SINE Alu 1 158 -18 996 148 38 11 chr10 27939695 27939878 -117649410 + L1MA8 LINE L1 6099 6286 -5 180 0 0 0 chr10 27939879 27939899 -117649389 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1746 125 3 81 chr10 27939903 27940200 -117649088 - AluSx SINE Alu -38 274 1 1666 185 0 30 chr10 27940708 27941010 -117648278 + AluJb SINE Alu 1 293 -19 1010 283 83 26 chr10 27941731 27942081 -117647207 - MLT1J LTR MaLR -30 481 112 286 214 0 29 chr10 27943133 27943203 -117646085 + GA-rich Low_complexity Low_complexity 1 68 0 2088 135 3 0 chr10 27943286 27943583 -117645705 + AluSx SINE Alu 1 298 -14 840 185 0 0 chr10 27943594 27943729 -117645559 + FLAM_C SINE Alu 2 136 -7 1662 201 7 3 chr10 27943739 27944042 -117645246 + AluJo SINE Alu 3 306 -6 756 190 14 7 chr10 27944733 27944875 -117644413 + FRAM SINE Alu 2 144 -32 276 309 94 42 chr10 27944894 27945085 -117644203 - L2 LINE L2 -411 2903 2703 405 369 45 11 chr10 27945100 27945279 -117644009 + MIR SINE MIR 11 195 -67 780 165 8 0 chr10 27945282 27945403 -117643885 + FLAM_C SINE Alu 2 123 -20 631 333 183 0 chr10 27945425 27945785 -117643503 - L2 LINE L2 -605 2709 2284 883 256 70 32 chr10 27945967 27946283 -117643005 + LTR37A LTR ERV1 99 426 0 962 208 15 34 chr10 27946689 27946954 -117642334 + L1M4 LINE L1 4904 5163 -983 2063 137 0 0 chr10 27947226 27947549 -117641739 - AluSx SINE Alu 0 323 1 7966 31 2 0 chr10 27947651 27948924 -117640364 - L1PA4 LINE L1 -6 6149 4875 539 175 0 53 chr10 27949098 27949212 -117640076 + FLAM_A SINE Alu 35 142 0 1682 171 4 7 chr10 27949828 27950108 -117639180 + AluJo SINE Alu 9 287 -25 1555 160 23 4 chr10 27950180 27950436 -117638852 - L1PA16 LINE L1 0 6166 5906 2355 229 38 72 chr10 27950576 27951277 -117638011 - L1ME1 LINE L1 -4 6162 5488 735 157 0 82 chr10 27951277 27951411 -117637877 - FLAM_A SINE Alu -10 123 1 2355 229 38 72 chr10 27951411 27951477 -117637811 - L1ME1 LINE L1 -678 5488 5421 1336 180 85 39 chr10 27951518 27951801 -117637487 + AluJo SINE Alu 1 296 -16 323 302 0 12 chr10 27951808 27951894 -117637394 - MER5B DNA MER1_type -91 87 3 2760 137 66 15 chr10 27952150 27952484 -117636804 + L1MC3 LINE L1 5262 5628 -2157 4089 94 73 25 chr10 27952484 27953088 -117636200 + LTR10E LTR ERV1 1 633 0 2760 137 66 15 chr10 27953088 27953221 -117636067 + L1MC3 LINE L1 5628 5753 -2032 381 73 59 29 chr10 27953221 27953252 -117636036 + MER41D LTR ERV1 1 30 -527 2164 105 34 7 chr10 27953252 27953546 -117635742 - AluSg SINE Alu -8 302 1 381 73 59 29 chr10 27953546 27953582 -117635706 + MER41D LTR ERV1 30 70 -487 2986 171 44 4 chr10 27953582 27954086 -117635202 + MER41D LTR ERV1 29 552 -5 1249 174 0 0 chr10 27954092 27954305 -117634983 + L1MC3 LINE L1 5755 5967 -1818 1921 141 7 0 chr10 27954380 27954664 -117634624 + AluSx SINE Alu 24 309 -3 451 316 46 0 chr10 27955326 27955478 -117633810 + LTR16A LTR ERVL 258 416 -34 252 212 45 0 chr10 27955721 27955787 -117633501 + MLT1K LTR MaLR 509 577 -11 1117 101 0 126 chr10 27955880 27955946 -117633342 + Tigger2a DNA MER2_type 1 74 -2634 2446 80 3 3 chr10 27955946 27956257 -117633031 - AluY SINE Alu 0 311 1 1117 101 0 126 chr10 27956257 27956397 -117632891 + Tigger2a DNA MER2_type 74 181 -253 1668 129 16 4 chr10 27956555 27956810 -117632478 + Tigger2a DNA MER2_type 187 444 0 21 57 0 0 chr10 27957282 27957317 -117631971 + AT_rich Low_complexity Low_complexity 1 35 0 934 162 0 0 chr10 27957487 27957623 -117631665 + MER1A DNA MER1_type 1 136 -391 2654 101 6 8 chr10 27957623 27957988 -117631300 - THE1B LTR MaLR 0 364 1 * 3049 92 8 0 chr10 27957988 27958364 -117630924 + MER1A DNA MER1_type 132 510 -19 351 243 157 0 chr10 27958390 27958530 -117630758 - MLT1F1 LTR MaLR -40 527 366 274 257 103 18 chr10 27958663 27958791 -117630497 - MLT1F1 LTR MaLR -371 178 1 2195 108 0 0 chr10 27959194 27959480 -117629808 - AluSx SINE Alu -18 294 9 407 330 179 18 chr10 27959542 27959821 -117629467 + L2 LINE L2 176 499 -2815 212 200 0 20 chr10 27960021 27960071 -117629217 + T-rich Low_complexity Low_complexity 32 80 0 204 159 23 0 chr10 27960062 27960106 -117629182 + (TTTA)n Simple_repeat Simple_repeat 4 48 0 * 1713 145 58 0 chr10 27960114 27960390 -117628898 - AluJo SINE Alu -20 292 1 286 120 0 40 chr10 27960431 27960481 -117628807 - MER94 DNA DNA -86 48 1 206 319 25 0 chr10 27960549 27960668 -117628620 + L2 LINE L2 774 895 -2419 666 333 58 21 chr10 27960719 27961185 -117628103 + L2 LINE L2 1177 1659 -1655 871 171 12 18 chr10 27961203 27961413 -117627875 + AluJo SINE Alu 120 328 0 1305 316 91 23 chr10 27961413 27961473 -117627815 + L2 LINE L2 1712 1767 -1547 2380 136 31 0 chr10 27961473 27961826 -117627462 + THE1B LTR MaLR 1 364 0 1305 316 91 23 chr10 27961826 27962594 -117626694 + L2 LINE L2 1767 2596 -718 2371 128 35 56 chr10 27962595 27962789 -117626499 + Tigger2a DNA MER2_type 1 198 -2510 1658 169 20 23 chr10 27962789 27963091 -117626197 + AluJo SINE Alu 1 301 -11 2371 128 35 56 chr10 27963091 27963327 -117625961 + Tigger2a DNA MER2_type 198 422 -12 4573 123 22 3 chr10 27963327 27964016 -117625272 + MER50 LTR ERV1 1 702 -32 370 367 107 11 chr10 27964109 27964379 -117624909 + L2 LINE L2 2635 2930 -384 195 255 0 0 chr10 27964381 27964428 -117624860 + L2 LINE L2 2482 2528 -786 1660 169 11 22 chr10 27964460 27964732 -117624556 - AluJo SINE Alu -38 274 6 1009 301 62 24 chr10 27964737 27965204 -117624084 + L2 LINE L2 2516 3001 -312 704 287 58 12 chr10 27965299 27965602 -117623686 + L2 LINE L2 2728 3043 -270 344 60 20 0 chr10 27965606 27965656 -117623632 - MER50 LTR ERV1 -544 190 140 196 30 61 0 chr10 27965674 27965707 -117623581 + (TAAA)n Simple_repeat Simple_repeat 4 38 0 763 81 65 0 chr10 27965708 27965832 -117623456 + Tigger2a DNA MER2_type 195 326 -118 729 104 0 9 chr10 27965834 27965940 -117623348 - MER50 LTR ERV1 -629 105 1 1441 134 28 28 chr10 27965940 27966194 -117623094 - Tigger2 DNA MER2_type -12 2706 2453 323 253 66 36 chr10 27966206 27966372 -117622916 + L2 LINE L2 3057 3227 -86 624 266 60 52 chr10 27966668 27966920 -117622368 - L1MC/D LINE L1 -2077 5731 5478 270 0 0 0 chr10 27967324 27967354 -117621934 + (TAAAA)n Simple_repeat Simple_repeat 1 30 0 273 299 24 39 chr10 27969182 27969309 -117619979 + MIR3 SINE MIR 43 167 -41 23 0 0 0 chr10 27969945 27969968 -117619320 + AT_rich Low_complexity Low_complexity 1 23 0 199 271 157 0 chr10 27970977 27971047 -117618241 - MIR SINE MIR -142 120 40 229 230 115 106 chr10 27971742 27971855 -117617433 - L1ME3 LINE L1 -81 6081 5968 1399 110 0 11 chr10 27972162 27972353 -117616935 + AluSx SINE Alu 1 189 -123 1441 165 31 39 chr10 27972827 27973087 -117616201 - AluJb SINE Alu -54 258 1 1549 230 228 29 chr10 27973134 27973895 -117615393 - L2 LINE L2 -40 3273 2346 337 243 39 29 chr10 27973960 27974063 -117615225 - MIR SINE MIR -89 173 70 2182 96 0 4 chr10 27974073 27974345 -117614943 + AluSc SINE Alu 7 277 -32 746 50 0 10 chr10 27974346 27974446 -117614842 + (GAAA)n Simple_repeat Simple_repeat 2 100 0 814 126 7 63 chr10 27974661 27974804 -117614484 - FLAM_C SINE Alu -7 136 2 780 160 112 0 chr10 27975978 27976103 -117613185 + FRAM SINE Alu 1 139 -37 293 42 0 42 chr10 27976105 27976153 -117613135 + (TAGA)n Simple_repeat Simple_repeat 1 46 0 316 305 0 24 chr10 27976155 27976237 -117613051 - L2 LINE L2 -93 3179 3100 2187 82 10 16 chr10 27976345 27976650 -117612638 + AluY SINE Alu 5 307 -4 407 218 0 0 chr10 27976884 27976971 -117612317 - MER33 DNA MER1_type 0 324 238 456 169 14 0 chr10 27976975 27977046 -117612242 - AluJ/FRAM SINE Alu -17 295 224 850 143 24 0 chr10 27977055 27977181 -117612107 - FLAM_C SINE Alu -10 133 5 38 51 0 0 chr10 27977368 27977427 -117611861 + AT_rich Low_complexity Low_complexity 1 59 0 801 145 0 8 chr10 27977457 27977574 -117611714 - AluJb SINE Alu -178 134 19 906 138 31 0 chr10 27977583 27977742 -117611546 - MER33 DNA MER1_type -160 164 1 207 146 0 0 chr10 27978534 27978575 -117610713 + (TG)n Simple_repeat Simple_repeat 1 41 0 286 273 162 0 chr10 27978675 27978774 -117610514 - MIR SINE MIR 0 262 148 1729 171 14 0 chr10 27978979 27979265 -117610023 + AluJo SINE Alu 3 292 -20 361 182 15 0 chr10 27979462 27979528 -117609760 + MIR SINE MIR 183 249 -13 2160 117 0 19 chr10 27979937 27980245 -117609043 - AluSx SINE Alu -10 302 1 30 27 0 0 chr10 27980385 27980422 -117608866 + AT_rich Low_complexity Low_complexity 1 37 0 812 152 0 8 chr10 27980513 27980638 -117608650 - FLAM_C SINE Alu -19 124 1 251 342 8 17 chr10 27980919 27981036 -117608252 + MIR3 SINE MIR 89 204 -4 338 189 78 22 chr10 27981476 27981566 -117607722 - MIR SINE MIR -96 166 72 350 264 168 0 chr10 27981778 27981903 -117607385 + MIR SINE MIR 101 246 -16 1483 153 71 0 chr10 27981923 27982178 -117607110 - L1PB4 LINE L1 0 6156 5884 839 298 52 87 chr10 27982921 27983038 -117606250 + L1MB8 LINE L1 5328 5420 -758 4849 93 61 12 chr10 27983038 27983408 -117605880 + L1MA2 LINE L1 5552 5902 -402 1798 112 0 135 chr10 27983408 27983764 -117605524 + AluSg1 SINE Alu 1 308 -1 4849 93 61 12 chr10 27983764 27984098 -117605190 + L1MA2 LINE L1 5902 6304 0 839 298 52 87 chr10 27984098 27984198 -117605090 + L1MB8 LINE L1 5420 5522 -656 2065 81 50 11 chr10 27984496 27984779 -117604509 + AluSg SINE Alu 1 294 -16 1570 169 49 20 chr10 27984972 27985479 -117603809 + L1MB8 LINE L1 5565 6139 -39 209 354 33 74 chr10 27985578 27985821 -117603467 - L2 LINE L2 -400 2914 2682 1018 154 0 0 chr10 27985852 27986008 -117603280 + AluJb SINE Alu 147 302 -10 323 341 116 0 chr10 27986816 27986989 -117602299 + MIR SINE MIR 68 260 -2 1348 245 142 18 chr10 27986997 27987504 -117601784 - MLT1G LTR MaLR 0 590 21 821 178 0 0 chr10 27987621 27987756 -117601532 + AluJo SINE Alu 1 135 -177 1681 205 0 0 chr10 27987756 27988049 -117601239 + AluJo SINE Alu 1 293 -19 971 94 0 16 chr10 27988181 27988308 -117600980 - AluSq/x SINE Alu -188 125 1 539 181 21 0 chr10 27988489 27988583 -117600705 - MER5A DNA MER1_type 0 189 94 1137 200 0 19 chr10 27988588 27988798 -117600490 + AluJo SINE Alu 77 282 -30 368 167 119 36 chr10 27988811 27988895 -117600393 - MER5A DNA MER1_type -98 91 1 403 299 157 10 chr10 27989057 27989261 -117600027 - MIR SINE MIR -7 255 22 620 88 0 0 chr10 27989707 27989787 -117599501 - MADE1 DNA Mariner 0 80 1 578 113 127 0 chr10 27990204 27990346 -117598942 - Tigger3(Golem) DNA MER2_type -504 2525 2366 2061 120 36 3 chr10 27990351 27990652 -117598636 - AluSx SINE Alu -1 311 1 1846 137 7 42 chr10 27990696 27991003 -117598285 - L1PA16 LINE L1 -1 6165 5870 2088 156 11 22 chr10 27991177 27991357 -117597931 + MER47A DNA MER2_type 4 180 -2143 2174 118 0 7 chr10 27991357 27991661 -117597627 + AluSx SINE Alu 1 302 -10 2088 156 11 22 chr10 27991661 27991845 -117597443 + MER47A DNA MER2_type 180 364 -2 774 261 14 24 chr10 27992070 27992288 -117597000 - MIR SINE MIR -9 253 37 2175 101 3 3 chr10 27992787 27993085 -117596203 - AluSc SINE Alu -11 298 1 303 28 0 0 chr10 27993672 27993708 -117595580 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 2121 124 7 7 chr10 27993759 27994066 -117595222 + AluSx SINE Alu 1 307 -5 605 311 95 10 chr10 27994222 27994528 -117594760 - HsTC2 DNA Tc2 -1068 830 499 348 279 47 100 chr10 27994550 27994834 -117594454 - HsTC2 DNA Tc2 -1609 289 28 2177 125 7 0 chr10 27994834 27995137 -117594151 + AluSx SINE Alu 1 305 -7 348 279 47 100 chr10 27995137 27995163 -117594125 - HsTC2 DNA Tc2 -1870 28 2 613 213 45 0 chr10 27995596 27995751 -117593537 + L1MA8 LINE L1 6130 6291 0 2181 126 7 0 chr10 27996224 27996534 -117592754 - AluSx SINE Alu 0 312 1 374 297 64 8 chr10 27996668 27996851 -117592437 + MIR SINE MIR 15 201 -61 1968 134 26 23 chr10 27997065 27997176 -117592112 + AluJo SINE Alu 7 116 -196 1578 110 9 0 chr10 27997176 27997395 -117591893 - AluSg/x SINE Alu -16 296 76 1968 134 26 23 chr10 27997395 27997588 -117591700 + AluJo SINE Alu 116 312 0 325 259 35 17 chr10 27997612 27997728 -117591560 - L1MC4 LINE L1 -6 8036 7919 2370 110 0 0 chr10 27997907 27998217 -117591071 - AluSx SINE Alu -2 310 1 679 226 126 50 chr10 27998230 27998469 -117590819 - L1MC4 LINE L1 -491 7551 7295 189 368 15 0 chr10 27998767 27998835 -117590453 - L2 LINE L2 -44 3228 3160 1126 176 45 10 chr10 27998859 27999058 -117590230 - AluJo SINE Alu -23 289 84 531 299 227 20 chr10 27999072 27999473 -117589815 - L2 LINE L2 0 3313 2830 546 147 0 0 chr10 27999521 27999596 -117589692 + AluS SINE Alu 2 76 -236 1170 107 6 0 chr10 27999596 27999755 -117589533 + AluSc SINE Alu 145 304 -5 447 180 279 6 chr10 27999763 27999924 -117589364 - L2 LINE L2 -1059 2255 2051 532 167 0 211 chr10 27999926 28000153 -117589135 - MER69 DNA AcHobo -1 2525 2347 35 24 0 0 chr10 28000172 28000214 -117589074 + AT_rich Low_complexity Low_complexity 1 42 0 585 213 82 16 chr10 28000497 28000680 -117588608 - MER69 DNA AcHobo -246 2280 2086 260 234 26 39 chr10 28001159 28001236 -117588052 - MER69 DNA AcHobo -1150 76 1 624 223 95 0 chr10 28001238 28001386 -117587902 - L2 LINE L2 -1262 2052 1891 914 118 0 15 chr10 28001431 28001566 -117587722 - FLAM_C SINE Alu 0 143 11 306 331 63 21 chr10 28001575 28001717 -117587571 - L2 LINE L2 -1408 1906 1759 1702 161 25 38 chr10 28002280 28002596 -117586692 - AluJo SINE Alu 0 312 1 387 0 0 0 chr10 28002637 28002680 -117586608 + (TG)n Simple_repeat Simple_repeat 2 44 0 23 0 0 0 chr10 28003487 28003510 -117585778 + AT_rich Low_complexity Low_complexity 1 23 0 2004 107 3 17 chr10 28003636 28003925 -117585363 + AluSq SINE Alu 22 306 -7 498 261 53 37 chr10 28004107 28004295 -117584993 + MIR SINE MIR 72 262 0 1206 181 0 0 chr10 28004517 28004721 -117584567 - AluJo SINE Alu -8 304 101 217 0 0 0 chr10 28005104 28005128 -117584160 + (TTTTG)n Simple_repeat Simple_repeat 1 170 0 2091 96 11 7 chr10 28005128 28005408 -117583880 - AluSx SINE Alu -1 304 1 229 247 169 11 chr10 28006172 28006261 -117583027 + MIR SINE MIR 20 122 -86 387 262 135 14 chr10 28006398 28006539 -117582749 - MIR SINE MIR -48 214 57 938 118 0 22 chr10 28006750 28006885 -117582403 + FLAM_C SINE Alu 1 132 -1 31 0 0 0 chr10 28006890 28006921 -117582367 + AT_rich Low_complexity Low_complexity 1 31 0 180 0 0 0 chr10 28008014 28008034 -117581254 + (TC)n Simple_repeat Simple_repeat 2 21 0 1848 141 17 0 chr10 28009044 28009335 -117579953 - AluJo SINE Alu -16 296 1 2079 130 0 0 chr10 28010545 28010854 -117578434 + AluSx SINE Alu 1 309 0 394 206 152 78 chr10 28011104 28011145 -117578143 + L1MC5 LINE L1 7671 7708 -253 2182 123 0 0 chr10 28011145 28011446 -117577842 + AluSq SINE Alu 1 301 -12 394 206 152 78 chr10 28011446 28011647 -117577641 + L1MC5 LINE L1 7708 7931 -30 2204 125 3 0 chr10 28011799 28012110 -117577178 + AluSx SINE Alu 1 312 0 225 256 209 39 chr10 28012113 28012242 -117577046 - MIR3 SINE MIR -23 185 35 2302 93 0 0 chr10 28012562 28012852 -117576436 - AluSx SINE Alu -10 302 13 5887 148 35 43 chr10 28013299 28014379 -117574909 - MER11C LTR ERVK 0 1071 1 1398 149 0 5 chr10 28014648 28014856 -117574432 - AluJb SINE Alu -21 291 85 2188 128 3 0 chr10 28015348 28015652 -117573636 + AluSg SINE Alu 1 305 -5 2265 108 0 0 chr10 28015799 28016096 -117573192 - AluSc SINE Alu 0 309 13 884 115 0 65 chr10 28016290 28016429 -117572859 + FLAM_C SINE Alu 2 131 -2 460 69 69 0 chr10 28016690 28016806 -117572482 + (TA)n Simple_repeat Simple_repeat 1 124 0 46 33 0 0 chr10 28017584 28017644 -117571644 + AT_rich Low_complexity Low_complexity 1 60 0 1759 156 60 23 chr10 28017708 28018009 -117571279 + AluJo SINE Alu 1 312 0 1707 104 0 0 chr10 28018072 28018294 -117570994 + AluY SINE Alu 1 222 -89 1296 149 0 5 chr10 28018312 28018513 -117570775 - AluSq SINE Alu -113 200 1 1954 113 0 0 chr10 28018805 28019062 -117570226 - AluSx SINE Alu -55 257 1 1997 139 7 0 chr10 28019262 28019557 -117569731 + AluSx SINE Alu 1 297 -15 1713 134 4 12 chr10 28020033 28020287 -117569001 + AluJo SINE Alu 17 268 -44 606 143 0 0 chr10 28020287 28020371 -117568917 + AluSg/x SINE Alu 216 299 -10 2088 164 0 0 chr10 28020964 28021276 -117568012 + AluJb SINE Alu 1 312 0 2300 94 0 3 chr10 28023395 28023693 -117565595 + AluY SINE Alu 1 297 -14 392 151 55 0 chr10 28024013 28024086 -117565202 + L1MA3 LINE L1 6173 6249 -56 2384 94 0 0 chr10 28024389 28024698 -117564590 + AluY SINE Alu 1 309 -2 2263 114 0 7 chr10 28025463 28025769 -117563519 + AluSx SINE Alu 1 304 -8 1597 159 58 7 chr10 28025814 28026091 -117563197 - AluJo SINE Alu -21 291 1 197 211 410 0 chr10 28026408 28026503 -117562785 + L2 LINE L2 1023 1156 -2158 905 126 0 8 chr10 28026553 28026680 -117562608 - FLAM_C SINE Alu -7 126 1 659 305 11 21 chr10 28026680 28026867 -117562421 + L2 LINE L2 1374 1558 -1756 735 267 61 16 chr10 28026882 28027276 -117562012 + L2 LINE L2 2720 3143 -170 1679 157 4 4 chr10 28027305 28027566 -117561722 - AluJo SINE Alu -34 278 18 328 143 0 0 chr10 28027614 28027663 -117561625 + AluJ/FLAM SINE Alu 18 66 -236 228 230 14 54 chr10 28027736 28027810 -117561478 + L2 LINE L2 3214 3284 -29 440 243 209 51 chr10 28028015 28028246 -117561042 - L2 LINE L2 -337 2977 2689 1712 154 13 27 chr10 28028246 28028545 -117560743 + AluJo SINE Alu 1 295 -17 440 243 209 51 chr10 28028545 28028605 -117560683 - L2 LINE L2 -625 2689 2640 25 51 0 0 chr10 28029517 28029556 -117559732 + AT_rich Low_complexity Low_complexity 1 39 0 520 204 54 0 chr10 28030629 28030722 -117558566 + 5S rRNA rRNA 6 103 -18 2219 123 0 0 chr10 28030993 28031303 -117557985 - AluSg SINE Alu 0 310 1 1700 176 0 11 chr10 28031486 28031770 -117557518 + AluJo SINE Alu 1 281 -31 378 0 0 0 chr10 28031770 28031812 -117557476 + (CA)n Simple_repeat Simple_repeat 1 42 0 1943 145 0 10 chr10 28032094 28032383 -117556905 + AluSx SINE Alu 1 286 -26 211 172 0 250 chr10 28032512 28032640 -117556648 + L2 LINE L2 3137 3232 -40 829 136 0 0 chr10 28033046 28033164 -117556124 - FLAM_C SINE Alu -15 118 1 921 157 0 0 chr10 28033657 28033797 -117555491 - AluJb SINE Alu -28 284 145 751 177 197 14 chr10 28034171 28034318 -117554970 + FAM SINE Alu 2 175 0 2021 92 33 11 chr10 28034796 28035069 -117554219 - AluSc SINE Alu -30 279 1 2134 109 3 38 chr10 28035896 28036216 -117553072 - AluSc SINE Alu 0 309 1 312 218 38 45 chr10 28036236 28036369 -117552919 - MLT1J2 LTR MaLR 0 466 351 596 250 14 14 chr10 28036458 28036602 -117552686 - MLT1J LTR MaLR -312 199 56 628 268 59 117 chr10 28036894 28037133 -117552155 - MER34 LTR ERV1 -18 524 273 2956 104 21 52 chr10 28037133 28037309 -117551979 - MER4C LTR ERV1 0 465 285 1931 124 40 7 chr10 28037309 28037608 -117551680 + AluSx SINE Alu 2 310 -2 2956 104 21 52 chr10 28037608 28037910 -117551378 - MER4C LTR ERV1 -180 285 2 628 268 59 117 chr10 28037910 28038226 -117551062 - MER34 LTR ERV1 -269 273 1 620 198 62 62 chr10 28038263 28038490 -117550798 - L1ME3A LINE L1 -39 6131 5905 1056 173 14 36 chr10 28038491 28038711 -117550577 - AluJb SINE Alu -18 294 80 1882 234 22 44 chr10 28038735 28038992 -117550296 - L1ME3A LINE L1 -316 5854 5593 2057 143 7 0 chr10 28038992 28039299 -117549989 - AluSx SINE Alu -3 309 1 1522 109 24 0 chr10 28039301 28039511 -117549777 - AluSg/x SINE Alu -14 298 84 1882 234 22 44 chr10 28039511 28039792 -117549496 - L1ME3A LINE L1 -578 5592 5325 2214 128 103 35 chr10 28040004 28040076 -117549212 - MSTA LTR MaLR 0 428 362 1921 96 0 57 chr10 28040076 28040356 -117548932 + AluSq SINE Alu 38 301 -12 2214 128 103 35 chr10 28040356 28040680 -117548608 - MSTA LTR MaLR -66 362 5 434 153 0 214 chr10 28041048 28041179 -117548109 + AluJb SINE Alu 1 103 -209 984 251 0 18 chr10 28041179 28041406 -117547882 + MSTD LTR MaLR 174 396 0 2438 180 136 103 chr10 28042678 28042809 -117546479 - Charlie2 DNA MER1_type -1 2861 2736 2256 115 0 0 chr10 28042809 28043097 -117546191 - AluSx SINE Alu -24 288 1 2438 180 136 103 chr10 28043097 28043250 -117546038 - Charlie2 DNA MER1_type -126 2736 2589 1276 179 27 0 chr10 28043250 28043473 -117545815 - L1MC1 LINE L1 0 6333 6105 2438 180 136 103 chr10 28043473 28043781 -117545507 - Charlie2 DNA MER1_type -273 2589 2293 2097 87 55 45 chr10 28043781 28044091 -117545197 + AluSq SINE Alu 1 313 0 2438 180 136 103 chr10 28044091 28044439 -117544849 - Charlie2 DNA MER1_type -569 2293 1888 483 273 212 0 chr10 28044452 28044650 -117544638 - Charlie2 DNA MER1_type -2532 330 91 767 176 15 15 chr10 28044733 28044864 -117544424 + FLAM_C SINE Alu 1 131 -2 640 224 203 10 chr10 28045048 28045403 -117543885 + MER39 LTR ERV1 9 469 -238 1755 187 17 28 chr10 28045447 28045800 -117543488 - MER4D LTR ERV1 -8 895 547 683 182 6 12 chr10 28045799 28045947 -117543341 - MER4E LTR ERV1 -589 283 28 * 291 157 0 0 chr10 28045964 28046015 -117543273 + CT-rich Low_complexity Low_complexity 2 52 0 1862 155 28 0 chr10 28046047 28046338 -117542950 + AluJb SINE Alu 1 299 -13 896 179 27 11 chr10 28046358 28046542 -117542746 + MER39 LTR ERV1 521 707 0 1177 228 131 60 chr10 28046669 28047164 -117542124 - MER39 LTR ERV1 0 707 1 350 232 36 72 chr10 28047451 28047479 -117541809 - L1ME4a LINE L1 0 6121 6094 2207 92 0 3 chr10 28047479 28047783 -117541505 + AluSc SINE Alu 1 303 0 350 232 36 72 chr10 28047783 28047891 -117541397 - L1ME4a LINE L1 -27 6094 5989 1950 139 23 7 chr10 28048306 28048607 -117540681 + AluJo SINE Alu 1 306 -6 2354 98 3 0 chr10 28048726 28049032 -117540256 - AluSq SINE Alu -6 307 1 443 258 15 22 chr10 28049117 28049305 -117539983 - MLT1H LTR MaLR -221 192 36 240 357 110 34 chr10 28049341 28049604 -117539684 + L2 LINE L2 2870 3152 -120 1805 165 0 0 chr10 28049695 28049968 -117539320 + AluJo SINE Alu 1 273 -39 2148 138 0 6 chr10 28050668 28050979 -117538309 - AluSx SINE Alu -1 311 3 619 152 0 0 chr10 28051128 28051227 -117538061 - L1MB4 LINE L1 0 6180 6082 844 173 0 8 chr10 28051269 28051402 -117537886 - FLAM_A SINE Alu -1 132 1 2468 71 0 0 chr10 28051450 28051744 -117537544 + AluSg SINE Alu 1 294 -16 533 248 118 7 chr10 28051761 28051914 -117537374 + MIR SINE MIR 64 233 -29 1886 128 57 4 chr10 28052112 28052393 -117536895 + AluSg SINE Alu 1 296 -14 2504 54 0 0 chr10 28052427 28052721 -117536567 + AluY SINE Alu 1 294 -17 966 157 13 7 chr10 28052843 28052996 -117536292 + FRAM SINE Alu 2 155 -21 479 252 224 0 chr10 28053013 28053160 -117536128 - MER5A DNA MER1_type -8 181 2 1930 147 0 26 chr10 28053513 28053820 -117535468 - AluJo SINE Alu -2 310 12 251 248 74 33 chr10 28053996 28054117 -117535171 + Charlie8 DNA MER1_type 116 241 -2176 861 165 0 0 chr10 28055221 28055354 -117533934 + FLAM_A SINE Alu 1 133 0 300 192 10 101 chr10 28055504 28055603 -117533685 + Charlie8 DNA MER1_type 123 212 -2205 28 71 0 0 chr10 28056134 28056190 -117533098 + AT_rich Low_complexity Low_complexity 1 56 0 24 32 0 0 chr10 28056318 28056349 -117532939 + AT_rich Low_complexity Low_complexity 1 31 0 1897 101 14 0 chr10 28056358 28056634 -117532654 - L1MA1 LINE L1 0 6302 6023 313 276 191 13 chr10 28056796 28056948 -117532340 - MIR SINE MIR -81 181 3 1792 144 6 58 chr10 28057626 28057952 -117531336 - AluJb SINE Alu -3 309 1 387 295 105 57 chr10 28058620 28058692 -117530596 + L1ME4a LINE L1 3997 4064 -2082 2025 148 0 3 chr10 28058692 28058995 -117530293 + AluSx SINE Alu 1 302 -10 387 295 105 57 chr10 28058995 28059402 -117529886 + L1ME4a LINE L1 4064 4515 -1631 2480 67 0 3 chr10 28059402 28059699 -117529589 + AluSg SINE Alu 1 296 -14 387 295 105 57 chr10 28059699 28059809 -117529479 + L1ME4a LINE L1 4515 4618 -1528 365 248 81 6 chr10 28060007 28060168 -117529120 + L1ME4a LINE L1 4882 5054 -1092 1701 174 16 7 chr10 28060170 28060474 -117528814 + AluJo SINE Alu 1 307 -5 431 111 0 14 chr10 28060484 28060556 -117528732 + (GGAA)n Simple_repeat Simple_repeat 2 72 0 365 278 125 44 chr10 28060557 28061335 -117527953 + L1ME4a LINE L1 5040 5885 -236 636 155 0 0 chr10 28061335 28061432 -117527856 + AluJ/FLAM SINE Alu 2 98 -214 33 0 0 0 chr10 28061533 28061566 -117527722 + AT_rich Low_complexity Low_complexity 1 33 0 1193 89 0 0 chr10 28062219 28062377 -117526911 - L1MA5A LINE L1 0 6297 6140 1789 174 3 0 chr10 28063209 28063497 -117525791 - AluJb SINE Alu -23 289 1 21 57 0 0 chr10 28063835 28063870 -117525418 + AT_rich Low_complexity Low_complexity 1 35 0 963 177 62 29 chr10 28063904 28064113 -117525175 + MER20 DNA MER1_type 1 216 -3 2161 119 3 3 chr10 28064226 28064538 -117524750 + AluSx SINE Alu 1 312 0 209 227 0 106 chr10 28064563 28064629 -117524659 + L2 LINE L2 3208 3266 -47 * 688 272 141 12 chr10 28064626 28064946 -117524342 - L2 LINE L2 -58 3255 2895 266 234 16 0 chr10 28065082 28065146 -117524142 - MIR SINE MIR -179 83 19 295 306 111 0 chr10 28065353 28065461 -117523827 + MER5A DNA MER1_type 7 126 -63 2183 96 0 51 chr10 28066384 28066520 -117522768 + AluSx SINE Alu 1 142 -170 2797 19 0 0 chr10 28066520 28066831 -117522457 + AluY SINE Alu 1 311 0 2183 96 0 51 chr10 28066831 28067008 -117522280 + AluSx SINE Alu 142 298 -14 296 325 152 10 chr10 28067097 28067294 -117521994 + MIR SINE MIR 38 262 0 674 178 76 0 chr10 28067327 28067445 -117521843 - MER5A DNA MER1_type 0 189 63 6380 209 84 76 chr10 28067469 28068447 -117520841 - L1MA6 LINE L1 -1 7259 6290 2237 99 0 16 chr10 28068447 28068786 -117520502 - AluSq SINE Alu 0 313 1 6380 209 84 76 chr10 28068786 28069228 -117520060 - L1MA6 LINE L1 -970 6290 5853 1194 163 0 0 chr10 28069228 28069430 -117519858 - L1PA4 LINE L1 -1 6154 5953 6380 209 84 76 chr10 28069430 28071105 -117518183 - L1MA6 LINE L1 -1407 5853 3996 3127 254 82 26 chr10 28071097 28072655 -117516633 - L1MA6 LINE L1 -4095 2011 68 * 653 248 22 63 chr10 28072801 28073023 -117516265 + L2 LINE L2 3084 3296 -17 537 110 0 0 chr10 28073025 28073107 -117516181 + (TGGA)n Simple_repeat Simple_repeat 3 84 0 1813 162 7 7 chr10 28073156 28073446 -117515842 + AluJo SINE Alu 1 290 -22 1740 187 3 3 chr10 28073455 28073802 -117515486 + AluJo SINE Alu 1 347 0 2491 71 0 0 chr10 28074162 28074459 -117514829 - AluSg SINE Alu -13 297 1 283 271 38 90 chr10 28074482 28074509 -117514779 - L2 LINE L2 0 3313 3286 1684 170 0 21 chr10 28074509 28074797 -117514491 + AluJo SINE Alu 1 282 -30 283 271 38 90 chr10 28074797 28074902 -117514386 - L2 LINE L2 -27 3286 3188 181 302 38 0 chr10 28074899 28074952 -117514336 + L2 LINE L2 1849 1903 -1411 * 903 226 26 107 chr10 28075342 28075687 -117513601 - MLT1C LTR MaLR -2 465 149 2003 145 3 3 chr10 28075726 28076022 -117513266 - AluJo SINE Alu -16 296 1 698 173 49 37 chr10 28076023 28076185 -117513103 - MLT1C LTR MaLR -303 164 1 1673 189 13 0 chr10 28076732 28077038 -117512250 - AluJo SINE Alu -2 310 1 216 296 153 10 chr10 28077134 28077232 -117512056 + MIR3 SINE MIR 87 198 -10 250 231 0 0 chr10 28077533 28077585 -117511703 - L3b LINE CR1 -1 1582 1531 210 114 29 0 chr10 28078786 28078821 -117510467 + MIR SINE MIR 105 140 -122 209 253 200 0 chr10 28078788 28078863 -117510425 + MIR3 SINE MIR 108 197 -11 * 336 24 0 0 chr10 28079264 28079305 -117509983 + (CA)n Simple_repeat Simple_repeat 1 41 0 401 310 43 49 chr10 28079498 28079637 -117509651 - L2 LINE L2 -17 3255 3116 1520 199 14 0 chr10 28079637 28079928 -117509360 + AluJo SINE Alu 3 297 -15 401 310 43 49 chr10 28079928 28079972 -117509316 - L2 LINE L2 -156 3116 3073 1463 148 19 53 chr10 28080428 28080691 -117508597 + AluJo SINE Alu 11 264 -48 1798 105 10 85 chr10 28080747 28081042 -117508246 - AluSx SINE Alu -1 311 39 2369 88 7 0 chr10 28082165 28082503 -117506785 - AluY SINE Alu 0 340 1 348 151 4 0 chr10 28082524 28082599 -117506689 - Alu SINE Alu 0 302 249 186 278 37 0 chr10 28082600 28082654 -117506634 + L3 LINE CR1 437 492 -1085 187 277 21 0 chr10 28082778 28082825 -117506463 + L3 LINE CR1 1064 1111 -466 1677 175 11 0 chr10 28083655 28083964 -117505324 + AluJo SINE Alu 1 312 0 1101 159 0 0 chr10 28084344 28084514 -117504774 + FRAM SINE Alu 1 170 -6 1893 164 0 0 chr10 28085660 28085970 -117503318 + AluSx SINE Alu 3 312 0 1057 212 47 74 chr10 28086753 28087092 -117502196 - MER87 LTR ERV1 -1 540 211 742 155 17 0 chr10 28087280 28087396 -117501892 + FLAM_A SINE Alu 4 121 -12 1641 199 4 0 chr10 28087410 28087691 -117501597 - AluSx SINE Alu -30 282 1 29 47 0 0 chr10 28087691 28087734 -117501554 + AT_rich Low_complexity Low_complexity 1 43 0 828 88 9 0 chr10 28087911 28088024 -117501264 + AluJb SINE Alu 169 282 -30 34 42 0 0 chr10 28088025 28088073 -117501215 + AT_rich Low_complexity Low_complexity 1 48 0 377 317 131 42 chr10 28088163 28088286 -117501002 + L1M2 LINE L1 899 1010 -5839 195 42 0 0 chr10 28088286 28088310 -117500978 + (CCG)n Simple_repeat Simple_repeat 2 25 0 377 317 131 42 chr10 28088310 28088498 -117500790 + L1M2 LINE L1 1010 1238 -5611 21 0 0 0 chr10 28089320 28089341 -117499947 + AT_rich Low_complexity Low_complexity 1 21 0 966 155 72 43 chr10 28090895 28090968 -117498320 - MER30 DNA MER1_type -17 213 144 1654 198 0 3 chr10 28090968 28091256 -117498032 + AluSx SINE Alu 1 287 -25 966 155 72 43 chr10 28091256 28091389 -117497899 - MER30 DNA MER1_type -86 144 1 546 151 0 21 chr10 28091693 28091786 -117497502 + MER65B LTR ERV1 1 91 -440 376 308 139 31 chr10 28092433 28092858 -117496430 - L1MEc LINE L1 -3526 2689 2219 1884 164 0 16 chr10 28092858 28093175 -117496113 - AluJo SINE Alu 0 312 1 243 79 0 0 chr10 28093455 28093493 -117495795 + (CA)n Simple_repeat Simple_repeat 1 38 0 525 298 127 27 chr10 28093526 28094077 -117495211 - L1MEc LINE L1 -4734 1662 1057 2592 159 21 7 chr10 28094082 28094516 -117494772 - L1MC1 LINE L1 0 6333 5894 3369 239 46 37 chr10 28094517 28095609 -117493679 - L1M4 LINE L1 -793 5353 4252 344 259 26 79 chr10 28095942 28096131 -117493157 + L1M4 LINE L1 3878 4056 -2090 1104 273 58 17 chr10 28096158 28096506 -117492782 - MER74A LTR ERVL -17 541 180 850 224 18 0 chr10 28096574 28096744 -117492544 - MER74A LTR ERVL -385 173 1 2189 163 44 21 chr10 28097144 28097573 -117491715 + Tigger6a DNA MER2_type 38 476 -607 241 215 190 0 chr10 28097604 28097683 -117491605 + L1MC5 LINE L1 7287 7380 -581 2356 142 61 17 chr10 28097684 28098058 -117491230 - MSTB LTR MaLR 0 426 31 1832 152 72 36 chr10 28098058 28098420 -117490868 - THE1C LTR MaLR 0 375 1 2356 142 61 17 chr10 28098420 28098453 -117490835 - MSTB LTR MaLR -395 31 1 258 169 52 26 chr10 28098462 28098539 -117490749 + L1MC5 LINE L1 7382 7460 -501 2107 121 0 0 chr10 28098694 28099002 -117490286 + AluSg1 SINE Alu 1 308 0 326 188 70 86 chr10 28099040 28099226 -117490062 + L1MC5 LINE L1 7603 7785 -176 366 203 47 68 chr10 28099267 28099415 -117489873 + L1MC5 LINE L1 7787 7931 -30 2077 118 0 20 chr10 28099528 28099825 -117489463 - AluSq SINE Alu -22 291 1 1506 162 12 0 chr10 28100350 28100597 -117488691 + AluSx SINE Alu 36 285 -27 218 103 0 26 chr10 28101496 28101535 -117487753 + (TA)n Simple_repeat Simple_repeat 2 39 0 650 226 8 0 chr10 28102841 28102965 -117486323 - AluSq/x SINE Alu -186 126 2 261 304 99 32 chr10 28103400 28103565 -117485723 + MIR SINE MIR 36 225 -37 189 167 56 37 chr10 28105325 28105379 -117483909 + MIR3 SINE MIR 118 172 -36 193 147 29 0 chr10 28107200 28107234 -117482054 + MIR SINE MIR 118 152 -56 193 147 29 0 chr10 28109039 28109073 -117480215 + MIR SINE MIR 118 152 -56 1520 162 0 0 chr10 28109202 28109430 -117479858 - AluSx SINE Alu -84 228 1 280 344 115 13 chr10 28109663 28109820 -117479468 + MIR SINE MIR 24 196 -66 184 277 36 24 chr10 28109854 28109937 -117479351 + MIR SINE MIR 166 249 -13 898 193 6 6 chr10 28111860 28112026 -117477262 - L1PB1 LINE L1 -2 6149 5984 1666 179 0 10 chr10 28112030 28112326 -117476962 - AluSx SINE Alu -19 293 1 183 42 0 0 chr10 28112760 28112784 -117476504 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2087 142 0 0 chr10 28112888 28113197 -117476091 - AluSc SINE Alu 0 309 1 25 0 0 0 chr10 28113543 28113568 -117475720 + AT_rich Low_complexity Low_complexity 1 25 0 1770 199 0 0 chr10 28113906 28114213 -117475075 + AluJo SINE Alu 1 307 -5 1831 149 14 3 chr10 28115370 28115665 -117473623 + AluJb SINE Alu 12 309 -3 2119 109 0 3 chr10 28115665 28115986 -117473302 + AluSg SINE Alu 1 320 0 669 126 107 0 chr10 28116147 28116250 -117473038 + AluJb SINE Alu 169 282 -30 32 43 0 0 chr10 28116252 28116298 -117472990 + AT_rich Low_complexity Low_complexity 1 46 0 234 65 0 0 chr10 28116792 28116823 -117472465 - MER30 DNA MER1_type -199 31 1 1622 98 13 27 chr10 28117050 28117274 -117472014 - L1PA10 LINE L1 0 6168 5948 593 118 0 21 chr10 28117361 28117454 -117471834 + MER65A LTR ERV1 1 91 -354 537 295 126 30 chr10 28118060 28118535 -117470753 - L1M4 LINE L1 -3478 2668 2148 1850 164 6 10 chr10 28118544 28118856 -117470432 - AluJo SINE Alu -1 311 1 1772 179 0 7 chr10 28118947 28119243 -117470045 - AluSx SINE Alu -18 294 1 2151 111 0 3 chr10 28119254 28119551 -117469737 - AluSx SINE Alu -16 296 1 2205 93 3 56 chr10 28119704 28120028 -117469260 - AluSc SINE Alu -2 307 1 2017 130 13 3 chr10 28120230 28120529 -117468759 + AluSg SINE Alu 1 302 -8 810 200 30 65 chr10 28120649 28120879 -117468409 + L2 LINE L2 3091 3312 -1 23 0 0 0 chr10 28120990 28121013 -117468275 + AT_rich Low_complexity Low_complexity 1 23 0 234 308 42 25 chr10 28121587 28121707 -117467581 + HAL1 LINE L1 1605 1726 -781 263 299 77 29 chr10 28122191 28122398 -117466890 + L1MEc LINE L1 2240 2456 -3940 2066 105 0 20 chr10 28122618 28122912 -117466376 + AluSx SINE Alu 23 310 -2 1664 178 0 11 chr10 28123542 28123871 -117465417 - AluJb SINE Alu 0 326 1 308 244 100 0 chr10 28124150 28124240 -117465048 - MIR SINE MIR -111 151 53 838 204 0 0 chr10 28124317 28124474 -117464814 - FRAM SINE Alu -18 158 2 24 0 0 0 chr10 28125364 28125388 -117463900 + AT_rich Low_complexity Low_complexity 1 24 0 2941 170 33 27 chr10 28125506 28126053 -117463235 - MER44D DNA MER2_type 0 605 1 218 307 251 7 chr10 28126319 28126606 -117462682 + L3b LINE CR1 1112 1468 -115 1757 136 58 0 chr10 28127001 28127295 -117461993 + L1PA16 LINE L1 5523 5833 -333 * 1884 43 0 9 chr10 28127290 28127523 -117461765 - L1PA4 LINE L1 -79 6076 5846 664 43 0 33 chr10 28127523 28127605 -117461683 + L1PA4 LINE L1 6067 6155 0 2163 115 68 0 chr10 28127613 28127935 -117461353 + L1PA16 LINE L1 5814 6157 -9 26 30 0 0 chr10 28127935 28127968 -117461320 + AT_rich Low_complexity Low_complexity 1 33 0 286 301 51 64 chr10 28128269 28128425 -117460863 - L2 LINE L2 -1 3271 3118 180 308 94 8 chr10 28128843 28128960 -117460328 - L2 LINE L2 -1276 2038 1912 576 56 0 0 chr10 28129046 28129118 -117460170 + L1PA3 LINE L1 6081 6152 -3 21 57 0 0 chr10 28130045 28130080 -117459208 + AT_rich Low_complexity Low_complexity 1 35 0 3017 137 35 4 chr10 28130163 28130654 -117458634 + L1MA9 LINE L1 5802 6307 -5 1914 104 6 130 chr10 28130874 28131219 -117458069 + AluSq SINE Alu 1 302 -1 38 0 0 0 chr10 28131220 28131258 -117458030 + AT_rich Low_complexity Low_complexity 1 38 0 832 172 8 0 chr10 28131907 28132029 -117457259 + FLAM_C SINE Alu 2 124 -19 340 261 60 45 chr10 28132297 28132340 -117456948 - MIR3 SINE MIR -17 191 150 1755 137 9 70 chr10 28132340 28132668 -117456620 - AluJo SINE Alu -4 308 1 340 261 60 45 chr10 28132668 28132758 -117456530 - MIR3 SINE MIR -58 150 56 819 216 0 0 chr10 28133217 28133370 -117455918 + MLT1A1 LTR MaLR 1 153 -212 2498 65 7 0 chr10 28133764 28134071 -117455217 + AluY SINE Alu 1 309 -2 1342 203 29 14 chr10 28134253 28134534 -117454754 - AluJo SINE Alu -12 300 16 391 367 77 0 chr10 28134622 28134818 -117454470 + MIR SINE MIR 52 262 0 236 368 30 77 chr10 28134845 28134935 -117454353 + L2 LINE L2 2989 3082 -190 3042 91 66 5 chr10 28134935 28135362 -117453926 + MLT2A2 LTR ERVL 1 453 0 236 368 30 77 chr10 28135362 28135505 -117453783 + L2 LINE L2 3082 3211 -61 2130 123 0 3 chr10 28135980 28136290 -117452998 + AluSx SINE Alu 1 309 -3 1812 109 0 116 chr10 28136290 28136641 -117452647 + AluSx SINE Alu 1 315 0 197 105 0 26 chr10 28137608 28137646 -117451642 + (TA)n Simple_repeat Simple_repeat 2 38 0 695 208 0 0 chr10 28138871 28138996 -117450292 - FLAM_C SINE Alu -17 126 2 276 336 47 16 chr10 28139437 28139565 -117449723 + MIR SINE MIR 48 179 -83 691 208 0 0 chr10 28141738 28141863 -117447425 - AluJb SINE Alu -186 126 2 403 296 153 6 chr10 28142276 28142452 -117446836 + MIR SINE MIR 24 225 -37 693 224 0 0 chr10 28144304 28144429 -117444859 - FLAM_C SINE Alu -17 126 2 263 304 43 26 chr10 28144864 28144979 -117444309 + MIR SINE MIR 36 152 -56 181 196 54 36 chr10 28146749 28146805 -117442483 + MIR3 SINE MIR 116 172 -36 814 201 18 6 chr10 28148985 28149149 -117440139 - L1PB1 LINE L1 -2 6149 5984 1558 192 0 10 chr10 28149153 28149450 -117439838 - AluSx SINE Alu -18 294 1 2083 112 0 0 chr10 28149976 28150304 -117438984 - AluSc SINE Alu 0 328 1 1354 209 0 0 chr10 28150947 28151200 -117438088 + AluJo SINE Alu 53 305 -7 1859 155 3 0 chr10 28152340 28152630 -117436658 + AluJb SINE Alu 3 293 -19 2057 100 4 4 chr10 28152630 28152963 -117436325 + AluSg SINE Alu 1 333 0 655 123 75 0 chr10 28153127 28153233 -117436055 + AluJb SINE Alu 169 282 -30 28 61 0 0 chr10 28153235 28153284 -117436004 + AT_rich Low_complexity Low_complexity 1 49 0 2613 51 0 6 chr10 28153932 28154243 -117435045 - AluY SINE Alu -2 309 1 730 160 216 44 chr10 28154577 28154654 -117434634 - MER30 DNA MER1_type -17 213 151 1897 147 3 3 chr10 28154654 28154939 -117434349 + AluSx SINE Alu 5 289 -23 730 160 216 44 chr10 28154939 28155042 -117434246 - MER30 DNA MER1_type -79 151 2 1552 116 14 0 chr10 28155289 28155496 -117433792 - L1PA10 LINE L1 -11 6157 5948 576 129 0 21 chr10 28155583 28155676 -117433612 + MER65B LTR ERV1 1 91 -440 386 296 148 30 chr10 28156281 28156747 -117432541 - L1MEc LINE L1 -3478 2737 2217 1746 175 10 3 chr10 28156764 28157072 -117432216 - AluJo SINE Alu -2 310 1 204 40 0 0 chr10 28157362 28157387 -117431901 + (CA)n Simple_repeat Simple_repeat 2 26 0 369 0 0 0 chr10 28157549 28157590 -117431698 + (CA)n Simple_repeat Simple_repeat 2 42 0 502 281 123 38 chr10 28157595 28158178 -117431110 - L1MEc LINE L1 -4708 1688 1056 2739 167 27 2 chr10 28158182 28158661 -117430627 - L1MC1 LINE L1 0 6333 5843 1102 219 190 11 chr10 28158661 28159040 -117430248 - MSTB2 LTR MaLR -10 447 1 418 152 0 51 chr10 28159071 28159150 -117430138 - AluS SINE Alu -10 299 225 3917 202 29 37 chr10 28159150 28160743 -117428545 - L1MC1 LINE L1 -519 5825 4252 291 264 54 72 chr10 28161073 28161240 -117428048 + L1P LINE L1 3878 4041 -2105 1509 223 19 22 chr10 28161282 28161650 -117427638 - MER74A LTR ERVL -13 545 179 902 199 36 0 chr10 28161700 28161866 -117427422 - MER74A LTR ERVL -386 172 1 2071 181 67 0 chr10 28162238 28162642 -117426646 + Tigger6a DNA MER2_type 38 468 -615 229 180 140 20 chr10 28162633 28162683 -117426605 + Tigger6a DNA MER2_type 707 762 -321 * 2186 156 68 29 chr10 28162760 28163136 -117426152 - MSTB LTR MaLR 0 426 31 1832 140 76 36 chr10 28163136 28163493 -117425795 - THE1C LTR MaLR -4 371 1 2186 156 68 29 chr10 28163493 28163526 -117425762 - MSTB LTR MaLR -395 31 1 518 206 31 140 chr10 28163526 28163948 -117425340 + L1MC5 LINE L1 7377 7752 -209 317 255 14 55 chr10 28164019 28164164 -117425124 + L1MC5 LINE L1 7790 7928 -33 1803 129 0 14 chr10 28164761 28165041 -117424247 + AluSx SINE Alu 36 311 -1 375 327 18 6 chr10 28166612 28166780 -117422508 + MER117 DNA MER1_type 2 171 -26 289 251 0 135 chr10 28166971 28167064 -117422224 - L1ME3A LINE L1 -223 5947 5884 1655 158 32 7 chr10 28167064 28167343 -117421945 + AluJo SINE Alu 1 286 -26 289 251 0 135 chr10 28167343 28167412 -117421876 - L1ME3A LINE L1 -286 5884 5807 312 250 107 36 chr10 28167419 28167559 -117421729 + L1MEd LINE L1 561 710 -5409 24 32 0 0 chr10 28167768 28167799 -117421489 + AT_rich Low_complexity Low_complexity 1 31 0 1661 83 0 0 chr10 28168902 28169118 -117420170 + AluSq SINE Alu 5 220 -93 408 179 0 0 chr10 28169491 28169558 -117419730 - AluSq/x SINE Alu -191 122 56 1715 164 30 20 chr10 28169592 28169956 -117419332 + AluJo SINE Alu 1 367 0 2291 102 10 0 chr10 28170151 28170456 -117418832 + AluSx SINE Alu 1 308 -4 1940 152 0 7 chr10 28170943 28171233 -117418055 - AluSx SINE Alu -22 290 3 2041 120 7 7 chr10 28171245 28171544 -117417744 - AluSx SINE Alu -13 299 1 1389 101 0 0 chr10 28171886 28172065 -117417223 + AluSg SINE Alu 1 179 -131 264 243 15 36 chr10 28172241 28172348 -117416940 + Alu SINE Alu 233 280 -20 1170 118 6 0 chr10 28172517 28172678 -117416610 - AluSq SINE Alu -18 295 134 2553 45 0 19 chr10 28172678 28172992 -117416296 - AluYb8 SINE Alu -10 308 1 256 167 13 13 chr10 28173278 28173356 -117415932 + (TA)n Simple_repeat Simple_repeat 2 79 0 232 274 131 24 chr10 28173437 28173484 -117415804 - MIR SINE MIR -1 261 220 2322 89 0 0 chr10 28173484 28173775 -117415513 - AluSg SINE Alu -7 303 13 232 274 131 24 chr10 28173775 28173811 -117415477 - MIR SINE MIR -42 220 169 392 184 149 0 chr10 28173870 28173984 -117415304 + L1MB7 LINE L1 6045 6175 -9 1783 163 3 3 chr10 28174950 28175268 -117414020 - AluJo SINE Alu 0 312 1 1590 203 16 16 chr10 28175325 28175635 -117413653 + AluJb SINE Alu 1 310 -2 2216 100 0 0 chr10 28175809 28176099 -117413189 + AluSq SINE Alu 1 290 -23 345 243 103 44 chr10 28176128 28176264 -117413024 - MIR SINE MIR -115 147 4 1117 103 0 0 chr10 28176427 28176583 -117412705 + AluY SINE Alu 136 291 -20 1032 90 0 0 chr10 28176596 28176741 -117412547 + (GGAA)n Simple_repeat Simple_repeat 4 148 0 1699 156 42 10 chr10 28177144 28177433 -117411855 + AluJb SINE Alu 1 298 -14 846 172 12 25 chr10 28177437 28177600 -117411688 + AluJo SINE Alu 1 161 -151 604 226 34 72 chr10 28177600 28177808 -117411480 + L2 LINE L2 3113 3312 -1 196 308 64 13 chr10 28178139 28178217 -117411071 - L2 LINE L2 -59 3254 3173 331 299 97 37 chr10 28179105 28179537 -117409751 + L1MEc LINE L1 2110 2567 -3579 2008 116 0 7 chr10 28179549 28179825 -117409463 + AluSx SINE Alu 24 297 -15 1662 182 0 11 chr10 28180532 28180850 -117408438 - AluJb SINE Alu 0 315 1 317 267 88 18 chr10 28181126 28181245 -117408043 - MIR SINE MIR -61 147 21 880 204 0 0 chr10 28181294 28181451 -117407837 - FRAM SINE Alu -19 157 1 24 0 0 0 chr10 28182343 28182367 -117406921 + AT_rich Low_complexity Low_complexity 1 24 0 2941 167 37 28 chr10 28182485 28183030 -117406258 - MER44D DNA MER2_type 0 605 1 214 318 269 7 chr10 28183297 28183583 -117405705 + L3b LINE CR1 1112 1472 -111 3863 128 55 0 chr10 28183977 28184576 -117404712 + L1PA16 LINE L1 5523 6154 -12 204 97 0 0 chr10 28184581 28184612 -117404676 + (TAAA)n Simple_repeat Simple_repeat 4 34 0 258 320 51 64 chr10 28184919 28185075 -117404213 - L2 LINE L2 -1 3271 3118 181 274 120 34 chr10 28185493 28185610 -117403678 - L2 LINE L2 -1276 2038 1912 3003 144 41 4 chr10 28186689 28187182 -117402106 + L1MA9 LINE L1 5802 6312 0 1955 114 0 57 chr10 28187395 28187748 -117401540 + AluY SINE Alu 1 311 0 1865 127 6 73 chr10 28187756 28188070 -117401218 + AluSq SINE Alu 1 293 -20 32 0 0 0 chr10 28188125 28188157 -117401131 + AT_rich Low_complexity Low_complexity 1 32 0 800 169 8 0 chr10 28188809 28188927 -117400361 + FLAM_C SINE Alu 2 120 -23 359 301 45 57 chr10 28189196 28189238 -117400050 - MIR3 SINE MIR -17 191 150 1696 158 3 47 chr10 28189238 28189595 -117399693 - AluJo SINE Alu 0 344 1 359 301 45 57 chr10 28189595 28189727 -117399561 - MIR3 SINE MIR -58 150 18 2148 184 17 0 chr10 28190145 28190504 -117398784 + MLT1A1 LTR MaLR 1 365 0 2307 96 51 61 chr10 28190577 28190832 -117398456 + L1PA11 LINE L1 5802 6058 -116 792 173 0 43 chr10 28190832 28190971 -117398317 + FLAM_C SINE Alu 1 133 0 1314 171 171 0 chr10 28190977 28191248 -117398040 + AluSx SINE Alu 3 314 0 2307 96 51 61 chr10 28191248 28191359 -117397929 + L1PA11 LINE L1 6063 6172 -2 249 122 20 0 chr10 28191515 28191564 -117397724 - MIR SINE MIR -49 213 164 1551 175 43 0 chr10 28191929 28192209 -117397079 - AluJb SINE Alu -20 292 1 832 191 0 19 chr10 28192720 28192877 -117396411 - AluJb SINE Alu -2 310 157 23 0 0 0 chr10 28192956 28192979 -117396309 + AT_rich Low_complexity Low_complexity 1 23 0 22 70 0 0 chr10 28193358 28193401 -117395887 + AT_rich Low_complexity Low_complexity 1 43 0 423 0 0 0 chr10 28193840 28193887 -117395401 + (TA)n Simple_repeat Simple_repeat 2 48 0 2137 112 3 0 chr10 28193889 28194176 -117395112 - AluSq SINE Alu -25 288 1 372 280 212 15 chr10 28194684 28194948 -117394340 + L1M4 LINE L1 4519 4834 -1312 1516 184 10 33 chr10 28195887 28196192 -117393096 - AluJo SINE Alu -14 298 1 2142 123 7 3 chr10 28196652 28196952 -117392336 - AluSx SINE Alu -7 305 5 315 276 128 100 chr10 28198279 28198757 -117390531 - L1M2 LINE L1 -5701 1148 658 1797 158 0 35 chr10 28199636 28199947 -117389341 + AluJo SINE Alu 1 300 -12 2257 109 0 6 chr10 28200180 28200492 -117388796 - AluSx SINE Alu -2 310 1 499 141 40 20 chr10 28200960 28201059 -117388229 - FLAM_C SINE Alu -3 140 40 805 126 0 0 chr10 28201118 28201229 -117388059 + FLAM_C SINE Alu 1 111 -32 1853 123 33 74 chr10 28201230 28201621 -117387667 + THE1C LTR MaLR 1 375 0 9663 112 66 8 chr10 28201624 28203115 -117386173 + THE1C-int LTR MaLR 4 1580 0 1899 143 66 39 chr10 28203116 28203480 -117385808 + THE1C LTR MaLR 2 375 0 884 153 0 0 chr10 28203490 28203621 -117385667 + FRAM SINE Alu 1 123 -53 283 295 21 0 chr10 28203834 28203929 -117385359 - MIR SINE MIR -16 246 150 183 283 57 19 chr10 28203955 28204008 -117385280 - MIR SINE MIR -197 65 11 398 185 0 0 chr10 28204156 28204221 -117385067 + AluJ/FLAM SINE Alu 1 65 -237 2615 48 0 3 chr10 28204577 28204888 -117384400 + AluY SINE Alu 2 311 0 376 245 43 29 chr10 28204909 28205048 -117384240 - L1ME4a LINE L1 -17 6104 5964 29 21 0 21 chr10 28205579 28205606 -117383682 + AT_rich Low_complexity Low_complexity 1 28 -18 701 153 48 16 chr10 28205606 28205730 -117383558 - FLAM_C SINE Alu -5 128 1 29 21 0 21 chr10 28205730 28205749 -117383539 + AT_rich Low_complexity Low_complexity 28 46 0 30 27 0 0 chr10 28206244 28206281 -117383007 + AT_rich Low_complexity Low_complexity 1 37 0 1930 132 0 0 chr10 28206284 28206549 -117382739 - AluSx SINE Alu -24 288 24 834 189 0 38 chr10 28206924 28207083 -117382205 + FRAM SINE Alu 4 156 -20 322 152 0 0 chr10 28207085 28207131 -117382157 + Alu SINE Alu 1 46 -254 4063 142 29 4 chr10 28207599 28208295 -117380993 - MER50 LTR ERV1 -20 714 2 342 252 139 9 chr10 28208902 28209017 -117380271 + L2 LINE L2 3141 3270 -2 652 134 0 45 chr10 28209538 28209650 -117379638 + FRAM SINE Alu 69 175 -1 2337 94 0 3 chr10 28210074 28210373 -117378915 + AluSq SINE Alu 1 298 -15 2250 105 3 10 chr10 28210667 28210973 -117378315 + AluSg SINE Alu 1 304 -6 837 235 199 35 chr10 28211424 28211790 -117377498 + LTR16A LTR ERVL 25 450 0 2173 110 27 3 chr10 28211850 28212151 -117377137 + AluSx SINE Alu 1 308 -4 2194 104 28 0 chr10 28213064 28213352 -117375936 - AluSx SINE Alu -14 298 3 21 0 0 56 chr10 28214051 28214071 -117375217 + AT_rich Low_complexity Low_complexity 1 20 -14 1979 135 17 0 chr10 28214071 28214360 -117374928 + AluSx SINE Alu 1 294 -18 21 0 0 56 chr10 28214360 28214375 -117374913 + AT_rich Low_complexity Low_complexity 20 34 0 2158 123 0 3 chr10 28214878 28215188 -117374100 - AluSx SINE Alu -2 310 2 2004 128 17 0 chr10 28215699 28215987 -117373301 - AluSx SINE Alu -6 306 14 2362 109 0 0 chr10 28216136 28216439 -117372849 + AluSq SINE Alu 1 303 -10 2061 121 17 3 chr10 28217148 28217437 -117371851 + AluSx SINE Alu 2 294 -18 21 0 0 0 chr10 28218183 28218204 -117371084 + AT_rich Low_complexity Low_complexity 1 21 0 2097 110 31 7 chr10 28218683 28218973 -117370315 + AluSx SINE Alu 1 297 -15 366 23 0 0 chr10 28219084 28219127 -117370161 + (CA)n Simple_repeat Simple_repeat 2 44 0 2058 138 3 0 chr10 28220095 28220393 -117368895 + AluSx SINE Alu 1 299 -13 317 305 105 24 chr10 28220845 28221055 -117368233 - L2 LINE L2 -189 3083 2857 216 349 12 0 chr10 28221052 28221138 -117368150 + MIR3 SINE MIR 98 184 -24 * 1943 161 0 16 chr10 28222233 28222550 -117366738 - AluSx SINE Alu 0 312 1 804 164 0 16 chr10 28223467 28223595 -117365693 + FLAM_C SINE Alu 2 127 -16 2212 103 7 0 chr10 28224452 28224743 -117364545 + AluSx SINE Alu 1 293 -19 220 309 24 12 chr10 28224887 28224971 -117364317 - MIR SINE MIR -79 129 45 1260 96 0 12 chr10 28225156 28225323 -117363965 - AluSg/x SINE Alu -4 308 144 1486 208 68 25 chr10 28225349 28225743 -117363545 - L1MC4 LINE L1 -283 7759 7349 1079 98 0 0 chr10 28225744 28225877 -117363411 + AluSq/x SINE Alu 1 133 -180 2193 107 7 0 chr10 28225880 28226171 -117363117 + AluSq SINE Alu 1 293 -20 311 169 208 0 chr10 28226176 28226253 -117363035 - L1MC4 LINE L1 -690 7352 7260 270 224 142 13 chr10 28226247 28226361 -117362927 - L1MC4 LINE L1 -692 7190 6993 * 1853 197 154 105 chr10 28226667 28226735 -117362553 - L1MC4 LINE L1 -848 6960 6897 2108 124 3 7 chr10 28226735 28227042 -117362246 - AluSx SINE Alu -6 306 1 1853 197 154 105 chr10 28227042 28227725 -117361563 - L1MC4 LINE L1 -911 6897 6249 916 71 94 0 chr10 28227725 28227852 -117361436 - MER85 DNA T2_type 0 139 1 1853 197 154 105 chr10 28227852 28227867 -117361421 - L1MC4 LINE L1 -1559 6249 6236 2640 46 0 0 chr10 28227867 28228171 -117361117 - AluY SINE Alu -7 304 1 1853 197 154 105 chr10 28228171 28228287 -117361001 - L1MC4 LINE L1 -1572 6236 6127 2047 139 7 3 chr10 28228287 28228597 -117360691 + AluJb SINE Alu 1 311 -1 1853 197 154 105 chr10 28228597 28228884 -117360404 - L1MC4 LINE L1 -1681 6127 5816 980 53 0 0 chr10 28228906 28229019 -117360269 + AluSg SINE Alu 21 133 -177 2090 122 3 0 chr10 28229019 28229307 -117359981 + AluSx SINE Alu 1 289 -23 24 0 0 0 chr10 28229307 28229331 -117359957 + AT_rich Low_complexity Low_complexity 1 24 0 1373 265 89 18 chr10 28229331 28229769 -117359519 - L1MC4 LINE L1 -1991 5817 5349 1149 78 0 0 chr10 28229773 28229915 -117359373 - AluSg/x SINE Alu -34 276 135 325 291 78 8 chr10 28230486 28230675 -117358613 + MIR SINE MIR 13 261 -1 1870 73 135 0 chr10 28230798 28231057 -117358231 + AluSx SINE Alu 1 294 -18 1864 146 11 7 chr10 28231652 28231939 -117357349 + AluJo SINE Alu 1 288 -24 493 269 126 9 chr10 28231944 28232167 -117357121 - MIR SINE MIR 0 262 14 295 263 60 45 chr10 28233658 28233791 -117355497 + MIR SINE MIR 58 192 -70 2296 75 31 3 chr10 28235418 28235711 -117353577 + AluSg SINE Alu 9 309 -1 326 298 163 0 chr10 28236204 28236382 -117352906 - MIR SINE MIR -55 207 1 1709 135 53 18 chr10 28237679 28237814 -117351474 + AluJo SINE Alu 1 130 -182 2218 89 10 35 chr10 28237814 28238127 -117351161 + AluY SINE Alu 1 305 -6 1709 135 53 18 chr10 28238127 28238272 -117351016 + AluJo SINE Alu 130 291 -21 609 232 11 89 chr10 28239019 28239162 -117350126 + MER5B DNA MER1_type 4 130 -48 2052 117 6 31 chr10 28239162 28239479 -117349809 + AluSx SINE Alu 1 309 -3 609 232 11 89 chr10 28239479 28239525 -117349763 + MER5B DNA MER1_type 130 178 0 425 229 153 59 chr10 28239661 28239831 -117349457 + MER5A DNA MER1_type 1 186 -3 2295 93 3 7 chr10 28239836 28240136 -117349152 - AluSx SINE Alu -13 299 1 279 333 0 10 chr10 28240738 28240834 -117348454 - MER5B DNA MER1_type -83 95 1 263 233 120 38 chr10 28241746 28241879 -117347409 + HAL1 LINE L1 784 927 -1580 409 309 169 12 chr10 28241886 28242135 -117347153 + HAL1 LINE L1 982 1269 -1238 234 248 130 91 chr10 28242174 28242320 -117346968 + HAL1 LINE L1 1510 1649 -858 268 22 44 22 chr10 28242320 28242365 -117346923 + (TTTTA)n Simple_repeat Simple_repeat 2 47 0 2162 72 7 4 chr10 28242369 28242646 -117346642 - AluSc SINE Alu -31 278 1 234 248 130 91 chr10 28242646 28242724 -117346564 + HAL1 LINE L1 1651 1748 -759 1662 182 0 11 chr10 28242882 28243208 -117346080 - AluJb SINE Alu 0 323 1 317 267 88 18 chr10 28243484 28243603 -117345685 - MIR SINE MIR -61 147 21 880 204 0 0 chr10 28243652 28243809 -117345479 - FRAM SINE Alu -19 157 1 24 0 0 0 chr10 28244701 28244725 -117344563 + AT_rich Low_complexity Low_complexity 1 24 0 2941 167 37 28 chr10 28244842 28245387 -117343901 - MER44D DNA MER2_type 0 605 1 214 318 269 7 chr10 28245654 28245940 -117343348 + L3b LINE CR1 1112 1472 -111 3863 128 55 0 chr10 28246334 28246933 -117342355 + L1PA16 LINE L1 5523 6154 -12 204 97 0 0 chr10 28246938 28246969 -117342319 + (TAAA)n Simple_repeat Simple_repeat 4 34 0 258 320 51 64 chr10 28247276 28247432 -117341856 - L2 LINE L2 -1 3271 3118 181 274 120 34 chr10 28247850 28247967 -117341321 - L2 LINE L2 -1276 2038 1912 3003 144 41 4 chr10 28249046 28249539 -117339749 + L1MA9 LINE L1 5802 6312 0 2197 83 0 62 chr10 28249752 28250077 -117339211 + AluY SINE Alu 1 305 -6 282 204 86 54 chr10 28250351 28250444 -117338844 + HAL1 LINE L1 2218 2313 -194 2375 104 3 0 chr10 28250451 28250759 -117338529 + AluSx SINE Alu 1 309 -3 2054 132 58 23 chr10 28254211 28254559 -117334729 - MER46B DNA MER2_type 0 236 2 1044 224 15 5 chr10 28254616 28254821 -117334467 + MER58A DNA MER1_type 17 223 -1 2153 109 7 0 chr10 28255110 28255404 -117333884 + AluSx SINE Alu 14 309 -3 453 153 0 59 chr10 28255879 28255964 -117333324 - Tigger5 DNA MER2_type -2 2321 2242 332 269 13 0 chr10 28255954 28256032 -117333256 + Tigger5 DNA MER2_type 2242 2320 -3 * 471 179 0 13 chr10 28256032 28256109 -117333179 - Tigger5 DNA MER2_type -2245 78 3 183 344 0 0 chr10 28258665 28258729 -117330559 - MIR SINE MIR -125 137 74 208 245 0 19 chr10 28259013 28259066 -117330222 + (TCTA)n Simple_repeat Simple_repeat 2 53 0 1028 169 17 6 chr10 28259071 28259248 -117330040 - AluJo SINE Alu -50 262 84 203 57 86 0 chr10 28260744 28260779 -117328509 + A-rich Low_complexity Low_complexity 3 40 0 24 85 0 0 chr10 28261080 28261139 -117328149 + AT_rich Low_complexity Low_complexity 1 59 0 189 0 0 0 chr10 28262088 28262109 -117327179 + (CTA)n Simple_repeat Simple_repeat 3 23 0 2299 93 0 3 chr10 28262678 28262978 -117326310 + AluSq SINE Alu 10 308 -5 23 0 0 0 chr10 28264963 28264986 -117324302 + AT_rich Low_complexity Low_complexity 1 23 0 2276 110 3 0 chr10 28265492 28265801 -117323487 + AluSx SINE Alu 1 310 -2 1787 145 23 10 chr10 28265818 28266122 -117323166 - AluJo SINE Alu -4 308 1 23 0 0 0 chr10 28266359 28266382 -117322906 + AT_rich Low_complexity Low_complexity 1 23 0 438 108 0 0 chr10 28266502 28266567 -117322721 + (TA)n Simple_repeat Simple_repeat 1 65 0 421 263 112 13 chr10 28266588 28266820 -117322468 - L1ME3A LINE L1 -223 5947 5693 534 174 47 160 chr10 28266847 28266899 -117322389 - MER5A DNA MER1_type 0 189 133 1886 148 3 7 chr10 28266899 28267190 -117322098 - AluJo SINE Alu -22 290 1 534 174 47 160 chr10 28267190 28267350 -117321938 - MER5A DNA MER1_type -56 133 1 539 203 117 0 chr10 28267358 28267486 -117321802 - Charlie1 DNA MER1_type 0 2761 2619 * 909 252 78 0 chr10 28267479 28267685 -117321603 - Charlie1 DNA MER1_type -2534 227 6 675 289 30 26 chr10 28267690 28267960 -117321328 - L1ME3A LINE L1 -508 5656 5386 21 0 0 0 chr10 28268185 28268206 -117321082 + AT_rich Low_complexity Low_complexity 1 21 0 2164 132 9 12 chr10 28269488 28269830 -117319458 - MER2 DNA MER2_type 0 344 4 807 264 0 6 chr10 28270302 28270469 -117318819 + MER8 DNA MER2_type 2 167 -72 458 138 0 11 chr10 28270499 28270586 -117318702 + (GGGA)n Simple_repeat Simple_repeat 3 88 0 1840 159 33 12 chr10 28271600 28271933 -117317355 + MER58B DNA MER1_type 2 341 0 613 201 87 14 chr10 28272415 28272579 -117316709 + L1ME3A LINE L1 5983 6152 -18 25 21 0 43 chr10 28272626 28272647 -117316641 + AT_rich Low_complexity Low_complexity 1 21 -24 2175 104 3 0 chr10 28272647 28272934 -117316354 + AluSx SINE Alu 1 288 -24 25 21 0 43 chr10 28272934 28272959 -117316329 + AT_rich Low_complexity Low_complexity 21 45 0 2169 95 27 0 chr10 28273146 28273440 -117315848 + AluSp SINE Alu 1 302 -11 21 0 0 0 chr10 28274853 28274874 -117314414 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr10 28277596 28277619 -117311669 + AT_rich Low_complexity Low_complexity 1 23 0 1474 152 91 23 chr10 28277672 28277936 -117311352 + AluJb SINE Alu 1 282 -30 1987 118 38 0 chr10 28278095 28278382 -117310906 - AluSx SINE Alu -14 298 1 27 0 0 0 chr10 28278427 28278454 -117310834 + AT_rich Low_complexity Low_complexity 1 27 0 764 168 172 13 chr10 28278527 28278808 -117310480 + MER93b LTR ERV1 20 371 -2 1249 187 74 21 chr10 28278888 28279214 -117310074 + MER2 DNA MER2_type 1 343 -1 335 252 115 81 chr10 28279571 28279893 -117309395 + L1M4 LINE L1 5002 5334 -812 525 116 63 0 chr10 28280269 28280364 -117308924 + L1MB3 LINE L1 6082 6182 -1 268 284 27 0 chr10 28280730 28280804 -117308484 + (TATG)n Simple_repeat Simple_repeat 2 77 0 1818 155 21 0 chr10 28282380 28282664 -117306624 + AluJb SINE Alu 1 290 -22 21 0 0 0 chr10 28283097 28283118 -117306170 + AT_rich Low_complexity Low_complexity 1 21 0 344 298 66 16 chr10 28283228 28283349 -117305939 - L2 LINE L2 -587 2727 2601 1623 254 95 4 chr10 28283537 28284002 -117305286 + LTR40a LTR ERVL 8 514 -5 1428 244 48 96 chr10 28284008 28285116 -117304172 + HERVL40 LTR ERVL 1 1023 -4507 1352 160 0 30 chr10 28285127 28285358 -117303930 - AluJo SINE Alu -29 283 60 1622 289 52 12 chr10 28285361 28285935 -117303353 + HERVL40 LTR ERVL 1018 1614 -3916 4920 239 60 5 chr10 28285935 28287238 -117302050 + HERVL40 LTR ERVL 2526 3978 -1552 3912 145 103 27 chr10 28287240 28287326 -117301962 + L1MB2 LINE L1 5287 5365 -806 2323 92 0 0 chr10 28287326 28287621 -117301667 + AluSc SINE Alu 1 295 -14 3912 145 103 27 chr10 28287621 28288356 -117300932 + L1MB2 LINE L1 5365 6171 0 2243 221 147 38 chr10 28288361 28288989 -117300299 + HERVL40 LTR ERVL 3965 4660 -870 297 232 50 88 chr10 28289235 28289416 -117299872 + HERVL40 LTR ERVL 2456 2629 -408 489 335 38 9 chr10 28289591 28289907 -117299381 + MER89-int LTR ERV1 6179 6503 -298 * 1246 231 53 12 chr10 28289777 28290120 -117299168 + HERVL40 LTR ERVL 2780 5529 -1 1431 221 52 93 chr10 28290121 28290323 -117298965 + LTR40a LTR ERVL 1 210 -309 2113 123 0 10 chr10 28290323 28290624 -117298664 + AluSx SINE Alu 1 298 -14 1431 221 52 93 chr10 28290624 28290960 -117298328 + LTR40a LTR ERVL 210 517 -2 2008 110 7 20 chr10 28291104 28291403 -117297885 - AluSx SINE Alu -17 295 1 589 327 201 5 chr10 28291667 28292110 -117297178 + L2 LINE L2 2176 2705 -609 2351 118 6 8 chr10 28292868 28293224 -117296064 + THE1A LTR MaLR 1 355 0 2627 46 0 3 chr10 28293515 28293821 -117295467 + AluY SINE Alu 1 305 -6 6548 64 26 16 chr10 28294508 28295413 -117293875 - L1PA12 LINE L1 0 6168 5254 784 112 0 0 chr10 28295424 28295531 -117293757 - U6 snRNA snRNA 0 107 1 1894 167 7 7 chr10 28295671 28295976 -117293312 + AluJb SINE Alu 1 305 -7 522 278 127 20 chr10 28296332 28296735 -117292553 + L1ME3A LINE L1 4551 4996 -1150 438 233 26 78 chr10 28296752 28296945 -117292343 + L1ME3A LINE L1 5769 5951 -219 955 153 45 116 chr10 28298777 28298845 -117290443 + AluJb SINE Alu 85 156 -156 1951 133 40 3 chr10 28298845 28299147 -117290141 + AluSq SINE Alu 1 313 0 955 153 45 116 chr10 28299147 28299320 -117289968 + AluJb SINE Alu 156 309 -3 641 272 11 69 chr10 28299339 28299615 -117289673 + MIR SINE MIR 3 262 0 2238 106 7 0 chr10 28299746 28300048 -117289240 + AluSx SINE Alu 1 304 -8 541 229 29 29 chr10 28300050 28300225 -117289063 + HAL1 LINE L1 1383 1557 -950 2878 154 27 19 chr10 28300249 28300832 -117288456 + L1 LINE L1 4107 4694 -1452 318 120 0 0 chr10 28300834 28300884 -117288404 + AluSc SINE Alu 246 295 -4 582 177 0 0 chr10 28300893 28300989 -117288299 + AluJb SINE Alu 203 298 -14 976 232 46 57 chr10 28300993 28301155 -117288133 + L1MA9 LINE L1 5943 6105 -207 2015 136 31 43 chr10 28301155 28301507 -117287781 + MER7A DNA MER2_type 1 346 0 976 232 46 57 chr10 28301507 28301639 -117287649 + L1MA9 LINE L1 6105 6235 -77 1960 145 49 9 chr10 28301639 28301963 -117287325 - MER1B DNA MER1_type 0 337 1 976 232 46 57 chr10 28301963 28302016 -117287272 + L1MA9 LINE L1 6235 6287 -25 674 220 65 18 chr10 28302052 28302220 -117287068 + MIR SINE MIR 1 176 -86 695 288 33 33 chr10 28302828 28303127 -117286161 + L1MEd LINE L1 103 401 -5804 1915 188 45 19 chr10 28303127 28303547 -117285741 + MLT1D LTR MaLR 71 501 -4 284 242 78 16 chr10 28303719 28303847 -117285441 + L1MEd LINE L1 738 873 -5332 * 298 201 79 50 chr10 28303845 28303984 -117285304 + L1MEd LINE L1 2146 2288 -4108 23 33 0 0 chr10 28304139 28304169 -117285119 + AT_rich Low_complexity Low_complexity 1 30 0 189 0 0 0 chr10 28304889 28304910 -117284378 + (A)n Simple_repeat Simple_repeat 1 21 0 2191 104 0 3 chr10 28304986 28305285 -117284003 + AluSx SINE Alu 1 298 -14 434 206 0 0 chr10 28305287 28305379 -117283909 + L1MC4a LINE L1 7402 7493 -315 766 170 7 0 chr10 28305379 28305514 -117283774 + FLAM_C SINE Alu 1 136 -7 574 214 0 0 chr10 28305514 28305626 -117283662 + AluJb SINE Alu 183 294 -18 1914 90 93 0 chr10 28305632 28305900 -117283388 + AluSp SINE Alu 1 293 -20 943 228 100 53 chr10 28305903 28306149 -117283139 + L1MC4 LINE L1 7567 7833 -209 1959 157 3 0 chr10 28306149 28306454 -117282834 + AluJb SINE Alu 1 306 -6 943 228 100 53 chr10 28306454 28306527 -117282761 + L1MC4 LINE L1 7833 7901 -141 414 303 148 48 chr10 28307536 28307873 -117281415 - LTR33 LTR ERVL -143 378 8 245 326 135 35 chr10 28307924 28308154 -117281134 - L2 LINE L2 -211 3061 2809 371 304 0 51 chr10 28308669 28308807 -117280481 - L2 LINE L2 -24 3289 3159 23 33 0 0 chr10 28308879 28308909 -117280379 + AT_rich Low_complexity Low_complexity 1 30 0 2122 141 0 0 chr10 28308984 28309282 -117280006 + AluSx SINE Alu 1 298 -14 270 299 201 7 chr10 28309530 28309684 -117279604 - MIR SINE MIR -49 213 30 25 0 0 0 chr10 28310295 28310320 -117278968 + AT_rich Low_complexity Low_complexity 1 25 0 358 263 119 31 chr10 28311840 28312000 -117277288 - L1ME LINE L1 -5341 729 556 1888 139 0 30 chr10 28312075 28312376 -117276912 + AluJb SINE Alu 1 292 -20 895 249 120 59 chr10 28312386 28312693 -117276595 - L1ME LINE L1 -5540 530 180 2167 109 14 0 chr10 28312693 28312987 -117276301 + AluSx SINE Alu 1 298 -14 895 249 120 59 chr10 28312987 28313169 -117276119 - L1ME LINE L1 -5890 180 11 2015 106 0 4 chr10 28313351 28313624 -117275664 + AluSx SINE Alu 29 300 -12 2469 64 3 0 chr10 28313871 28314168 -117275120 + AluSx SINE Alu 1 298 -14 1570 193 3 3 chr10 28314183 28314468 -117274820 + AluJo SINE Alu 25 309 -3 955 234 79 69 chr10 28314642 28315098 -117274190 + MER21B LTR ERV1 295 739 -6 1023 221 9 18 chr10 28315386 28315612 -117273676 - MER58A DNA MER1_type 0 224 1 21 0 0 0 chr10 28315696 28315717 -117273571 + AT_rich Low_complexity Low_complexity 1 21 0 346 266 43 0 chr10 28315769 28315863 -117273425 + GA-rich Low_complexity Low_complexity 3 100 0 21 89 0 0 chr10 28315904 28315960 -117273328 + AT_rich Low_complexity Low_complexity 1 56 0 1059 218 123 35 chr10 28316747 28317147 -117272141 - MLT1D LTR MaLR -59 446 12 964 162 26 24 chr10 28317455 28317806 -117271482 - MLT1B LTR MaLR 0 390 3 2139 123 0 20 chr10 28317850 28318151 -117271137 + AluSx SINE Alu 1 295 -17 1359 171 81 8 chr10 28318484 28318869 -117270419 + Charlie1 DNA MER1_type 2343 2755 -6 438 333 36 31 chr10 28319094 28319289 -117269999 + MIR3 SINE MIR 3 198 -10 4217 197 46 34 chr10 28320412 28320512 -117268776 + Tigger6a DNA MER2_type 2 99 -1498 1682 187 3 14 chr10 28320512 28320801 -117268487 + AluJo SINE Alu 4 289 -23 4217 197 46 34 chr10 28320801 28321768 -117267520 + Tigger6a DNA MER2_type 99 1082 -1 306 0 0 0 chr10 28321870 28321904 -117267384 + (TG)n Simple_repeat Simple_repeat 1 34 0 1967 121 22 0 chr10 28321904 28322177 -117267111 - AluSx SINE Alu -33 279 1 260 245 0 0 chr10 28322360 28322413 -117266875 + AluSp SINE Alu 123 175 -128 907 157 30 45 chr10 28322414 28322612 -117266676 + L1MB3 LINE L1 5981 6175 -8 2074 111 0 10 chr10 28322757 28323045 -117266243 + AluSx SINE Alu 1 285 -27 377 263 32 70 chr10 28323127 28323218 -117266070 + L1MEc LINE L1 1787 1880 -4516 1947 115 29 70 chr10 28323218 28323531 -117265757 + AluSx SINE Alu 1 300 -12 377 263 32 70 chr10 28323531 28323584 -117265704 + L1MEc LINE L1 1880 1933 -4463 2102 110 0 36 chr10 28323584 28323892 -117265396 + AluSg1 SINE Alu 1 297 -12 377 263 32 70 chr10 28323892 28324062 -117265226 + L1MEc LINE L1 1933 2090 -4306 1703 232 29 64 chr10 28324148 28324600 -117264688 + L1MEc LINE L1 2384 2804 -3411 3315 124 19 55 chr10 28324600 28325223 -117264065 + L1MA9 LINE L1 5706 6306 -6 1703 232 29 64 chr10 28325223 28325469 -117263819 + L1MEc LINE L1 2804 3057 -3158 2275 84 10 14 chr10 28325470 28325767 -117263521 - AluSg1 SINE Alu -13 296 1 23 0 0 0 chr10 28326213 28326236 -117263052 + AT_rich Low_complexity Low_complexity 1 23 0 2318 90 3 32 chr10 28326410 28326721 -117262567 - AluSp SINE Alu -11 302 1 1930 184 3 7 chr10 28326836 28327146 -117262142 - AluJb SINE Alu -3 309 1 1847 151 3 10 chr10 28327203 28327523 -117261765 + AluJb SINE Alu 1 312 0 342 220 110 0 chr10 28328484 28328602 -117260686 - L1MB7 LINE L1 -9 6175 6045 212 319 163 28 chr10 28328603 28328697 -117260591 + MIR SINE MIR 102 223 -39 2167 104 0 0 chr10 28328697 28328984 -117260304 + AluSg SINE Alu 13 299 -11 212 319 163 28 chr10 28328984 28329030 -117260258 + MIR SINE MIR 223 261 -1 196 135 19 19 chr10 28329122 28329174 -117260114 + (TA)n Simple_repeat Simple_repeat 1 52 0 2228 96 3 0 chr10 28329211 28329514 -117259774 - AluY SINE Alu -7 304 1 2525 69 0 0 chr10 28329787 28330093 -117259195 + AluSq SINE Alu 1 306 -7 2073 140 0 3 chr10 28330217 28330524 -117258764 - AluSg SINE Alu 0 310 5 2124 129 0 0 chr10 28330878 28331173 -117258115 + AluSx SINE Alu 5 299 -13 1863 168 0 10 chr10 28331183 28331474 -117257814 + AluSx SINE Alu 1 288 -24 21 0 0 0 chr10 28331474 28331495 -117257793 + AT_rich Low_complexity Low_complexity 1 21 0 745 138 16 0 chr10 28331719 28331842 -117257446 + FLAM_C SINE Alu 1 125 -8 1662 196 66 0 chr10 28331842 28332235 -117257053 - Tigger6a DNA MER2_type -625 458 40 886 176 74 0 chr10 28332620 28332796 -117256492 + MER74A LTR ERVL 1 189 -369 1217 236 20 10 chr10 28332835 28333208 -117256080 + MER74A LTR ERVL 179 611 -11 378 274 59 87 chr10 28333225 28333444 -117255844 - L1M4 LINE L1 -2090 4056 3844 3671 210 38 10 chr10 28333811 28335315 -117253973 + L1MC1 LINE L1 4284 5825 -519 419 157 0 36 chr10 28335315 28335398 -117253890 + AluS SINE Alu 227 306 -5 335 171 0 61 chr10 28335429 28335511 -117253777 + MSTB2 LTR MaLR 1 77 -351 828 220 34 34 chr10 28335531 28335795 -117253493 + MSTB2 LTR MaLR 184 447 -10 2253 180 31 4 chr10 28335795 28336273 -117253015 + L1MC1 LINE L1 5843 6333 0 405 294 107 18 chr10 28336276 28336836 -117252452 + L1MEc LINE L1 955 1582 -4728 369 0 0 0 chr10 28336865 28336906 -117252382 + (TG)n Simple_repeat Simple_repeat 2 42 0 1937 146 10 10 chr10 28337196 28337505 -117251783 + AluJo SINE Alu 1 309 -3 657 310 139 24 chr10 28337505 28337973 -117251315 + L1MEc LINE L1 2135 2656 -3473 589 97 0 21 chr10 28338572 28338665 -117250623 - MER65B LTR ERV1 -440 91 1 1377 126 18 22 chr10 28338752 28338974 -117250314 + L1PA10 LINE L1 5948 6168 0 626 166 221 44 chr10 28339199 28339302 -117249986 + MER30 DNA MER1_type 1 84 -146 1911 147 3 3 chr10 28339302 28339587 -117249701 - AluSx SINE Alu -23 289 5 626 166 221 44 chr10 28339587 28339664 -117249624 + MER30 DNA MER1_type 84 213 -17 26 64 0 0 chr10 28340633 28340680 -117248608 + AT_rich Low_complexity Low_complexity 1 47 0 770 106 9 0 chr10 28340681 28340794 -117248494 - AluJb SINE Alu -30 282 169 2208 93 0 0 chr10 28340958 28341267 -117248021 - AluSg SINE Alu 0 309 1 1654 166 35 0 chr10 28341267 28341555 -117247733 - AluJb SINE Alu -11 301 3 229 185 123 25 chr10 28342635 28342716 -117246572 + L1MC4 LINE L1 6959 7047 -995 1981 138 3 7 chr10 28342717 28343022 -117246266 + AluSx SINE Alu 1 304 -8 257 183 122 0 chr10 28343160 28343291 -117245997 + L1MC4 LINE L1 7137 7352 -690 2046 131 7 0 chr10 28343296 28343587 -117245701 - AluSq SINE Alu -20 293 1 1102 98 0 0 chr10 28343587 28343720 -117245568 - AluSg1 SINE Alu -176 133 1 257 213 17 148 chr10 28343722 28343952 -117245336 - L1MC5 LINE L1 -380 7581 7382 853 126 132 33 chr10 28343961 28343994 -117245294 + MSTB LTR MaLR 1 29 -397 1725 145 66 38 chr10 28343994 28344359 -117244929 + THE1C LTR MaLR 1 375 0 853 126 132 33 chr10 28344359 28344507 -117244781 + MSTB LTR MaLR 29 200 -226 5616 42 1 0 chr10 28344507 28345671 -117243617 - L1PA5 LINE L1 -202 5952 4788 1424 72 0 0 chr10 28345671 28345851 -117243437 + L1PA5 LINE L1 5966 6146 -8 533 15 15 0 chr10 28345851 28345917 -117243371 + (TA)n Simple_repeat Simple_repeat 1 67 0 1766 171 0 3 chr10 28346953 28347245 -117242043 + AluJb SINE Alu 1 291 -21 213 366 143 17 chr10 28347538 28347713 -117241575 - L2 LINE L2 -4 3268 3072 * 217 306 53 77 chr10 28347681 28348004 -117241284 - L2 LINE L2 -1428 1886 1572 499 174 33 16 chr10 28348269 28348390 -117240898 + MSTA LTR MaLR 185 307 -121 3262 208 46 28 chr10 28348553 28350097 -117239191 + L1MC2 LINE L1 4252 5824 -520 1588 206 10 0 chr10 28350097 28350393 -117238895 + AluSx SINE Alu 1 299 -13 3262 208 46 28 chr10 28350393 28350418 -117238870 + L1MC2 LINE L1 5824 5847 -497 497 151 157 60 chr10 28350429 28350595 -117238693 + MSTC LTR MaLR 1 182 -246 228 143 20 0 chr10 28351299 28351348 -117237940 + MIR SINE MIR 164 213 -49 215 172 125 62 chr10 28351479 28351504 -117237784 + MIR SINE MIR 85 107 -101 5659 107 8 3 chr10 28351504 28351615 -117237673 - L1PA11 LINE L1 -2 6172 6063 215 77 0 26 chr10 28351615 28351654 -117237634 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 1899 126 0 34 chr10 28351654 28351947 -117237341 - AluSx SINE Alu -29 283 1 5659 107 8 3 chr10 28351947 28352961 -117236327 - L1PA11 LINE L1 -110 6064 5037 215 172 125 62 chr10 28352961 28352999 -117236289 + MIR SINE MIR 107 152 -56 236 333 105 43 chr10 28353135 28353345 -117235943 + L2 LINE L2 2811 3033 -239 1834 166 3 10 chr10 28353771 28354073 -117235215 + AluJb SINE Alu 1 300 -12 253 246 0 0 chr10 28354317 28354382 -117234906 + AluJ/FLAM SINE Alu 1 65 -237 1749 144 7 18 chr10 28354382 28354660 -117234628 + AluJo SINE Alu 36 310 -2 24 0 0 0 chr10 28354781 28354805 -117234483 + AT_rich Low_complexity Low_complexity 1 24 0 2494 86 0 0 chr10 28355037 28355340 -117233948 - AluSx SINE Alu -9 303 1 3806 193 37 19 chr10 28355511 28356808 -117232480 + Charlie1a DNA MER1_type 14 1389 -66 2371 113 0 0 chr10 28356809 28357119 -117232169 + AluSg SINE Alu 1 310 0 555 324 221 25 chr10 28357149 28357628 -117231660 - L2 LINE L2 -923 2391 2007 1634 146 54 37 chr10 28357628 28357922 -117231366 - AluJo SINE Alu -13 299 1 555 324 221 25 chr10 28357922 28358443 -117230845 - L2 LINE L2 -1307 2007 1195 544 157 17 17 chr10 28358463 28358578 -117230710 + FLAM_A SINE Alu 20 134 -8 2287 107 3 0 chr10 28358629 28358928 -117230360 + AluSp SINE Alu 1 300 -13 1955 154 0 7 chr10 28359333 28359632 -117229656 + AluSx SINE Alu 1 297 -15 379 245 52 43 chr10 28359636 28359888 -117229400 + L1 LINE L1 3084 3332 -2814 2184 112 0 7 chr10 28359888 28360191 -117229097 + AluSx SINE Alu 1 301 -11 379 245 52 43 chr10 28360191 28360648 -117228640 + L1 LINE L1 3332 3975 -2171 * 1753 218 65 28 chr10 28360647 28361183 -117228105 + L1ME1 LINE L1 5549 6104 -62 700 115 26 0 chr10 28361239 28361352 -117227936 + L1MB4 LINE L1 6065 6180 0 222 323 111 20 chr10 28362359 28362458 -117226830 + MIR3 SINE MIR 78 185 -23 1273 255 81 26 chr10 28362468 28363055 -117226233 + L1MC4a LINE L1 5317 5821 -341 2249 126 19 19 chr10 28363242 28363614 -117225674 - Tigger1 DNA MER2_type -97 2321 1950 745 203 0 23 chr10 28363616 28363744 -117225544 + FLAM_A SINE Alu 2 126 -16 2237 118 0 0 chr10 28363752 28364057 -117225231 + AluSq SINE Alu 1 305 -8 12253 117 41 20 chr10 28364064 28365284 -117224004 - Tigger1 DNA MER2_type -462 1956 763 2318 99 0 3 chr10 28365284 28365586 -117223702 - AluSg SINE Alu -9 301 1 2173 117 0 7 chr10 28365596 28365896 -117223392 - AluY SINE Alu -13 298 1 12253 117 41 20 chr10 28365896 28365956 -117223332 - Tigger1 DNA MER2_type -1663 755 698 2185 120 0 7 chr10 28365956 28366265 -117223023 - AluSg SINE Alu -3 307 1 12253 117 41 20 chr10 28366265 28366888 -117222400 - Tigger1 DNA MER2_type -1720 698 1 29 0 0 0 chr10 28366902 28366931 -117222357 + AT_rich Low_complexity Low_complexity 1 29 0 279 264 25 63 chr10 28367266 28367317 -117221971 + L1MC4a LINE L1 6531 6582 -1226 2575 47 0 0 chr10 28367317 28367613 -117221675 + AluY SINE Alu 1 296 -15 279 264 25 63 chr10 28367613 28367720 -117221568 + L1MC4a LINE L1 6582 6683 -1125 1187 117 58 0 chr10 28367773 28367979 -117221309 + L1MA8 LINE L1 6072 6289 -2 2954 191 146 31 chr10 28368231 28368716 -117220572 - L1ME1 LINE L1 -22 6144 5543 1781 165 7 16 chr10 28368716 28369019 -117220269 + AluJb SINE Alu 5 304 -8 2954 191 146 31 chr10 28369019 28369273 -117220015 - L1ME1 LINE L1 -623 5543 5320 818 148 0 15 chr10 28369273 28369408 -117219880 - FRAM SINE Alu -18 158 26 2126 125 0 0 chr10 28369633 28369929 -117219359 + AluSx SINE Alu 1 296 -16 464 274 31 75 chr10 28369960 28370215 -117219073 - L1MC4 LINE L1 -366 7676 7433 1142 265 26 20 chr10 28370278 28370621 -117218667 - HsTC2b DNA Tc2 -570 345 1 2258 84 0 7 chr10 28370673 28370981 -117218307 + AluY SINE Alu 1 306 0 1039 134 0 7 chr10 28371611 28371760 -117217528 + AluJb SINE Alu 1 148 -164 923 46 0 0 chr10 28371973 28372081 -117217207 + AluY SINE Alu 194 301 -10 21 0 0 0 chr10 28372127 28372148 -117217140 + AT_rich Low_complexity Low_complexity 1 21 0 2277 77 3 39 chr10 28372356 28372668 -117216620 - AluY SINE Alu -10 301 1 264 122 0 0 chr10 28373272 28373313 -117215975 + (GAAAA)n Simple_repeat Simple_repeat 3 43 0 1255 149 107 9 chr10 28373784 28373999 -117215289 + MER46A DNA MER2_type 1 236 0 428 296 142 21 chr10 28374205 28374438 -117214850 + MIR SINE MIR 1 261 -1 2477 92 0 0 chr10 28374515 28374821 -117214467 + AluSx SINE Alu 1 306 -6 1897 140 49 0 chr10 28374831 28375117 -117214171 + AluSx SINE Alu 1 300 -12 236 391 0 9 chr10 28375145 28375255 -117214033 + MIR SINE MIR 28 136 -126 261 0 0 0 chr10 28375260 28375289 -117213999 + (A)n Simple_repeat Simple_repeat 1 29 0 23 0 0 0 chr10 28375543 28375566 -117213722 + AT_rich Low_complexity Low_complexity 1 23 0 2381 102 0 3 chr10 28375864 28376177 -117213111 + AluSx SINE Alu 1 312 0 1834 164 0 10 chr10 28376185 28376489 -117212799 + AluJb SINE Alu 1 301 -11 980 136 13 13 chr10 28376549 28376704 -117212584 + AluJb SINE Alu 157 311 -1 285 29 0 0 chr10 28377356 28377390 -117211898 + (A)n Simple_repeat Simple_repeat 1 34 0 180 0 0 0 chr10 28378992 28379012 -117210276 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 216 143 0 0 chr10 28379426 28379468 -117209820 + (TTGGGG)n Simple_repeat Simple_repeat 3 44 0 350 270 63 27 chr10 28380342 28380453 -117208835 - L2 LINE L2 0 3272 3158 1413 189 14 11 chr10 28380590 28380870 -117208418 - AluJo SINE Alu -27 285 5 282 269 10 58 chr10 28381618 28381722 -117207566 - MIR SINE MIR -79 183 85 2111 159 40 38 chr10 28381755 28381952 -117207336 + MSTA LTR MaLR 1 196 -232 1552 166 0 111 chr10 28381952 28382284 -117207004 + AluJb SINE Alu 2 296 -6 2111 159 40 38 chr10 28382284 28382513 -117206775 + MSTA LTR MaLR 196 428 0 696 189 6 11 chr10 28382612 28382792 -117206496 + GA-rich Low_complexity Low_complexity 2 180 0 478 156 25 54 chr10 28382796 28382945 -117206343 + L1ME1 LINE L1 5188 5332 -840 737 143 71 0 chr10 28382945 28383057 -117206231 + AluJb SINE Alu 2 121 -191 1018 225 21 55 chr10 28383073 28383088 -117206200 + L1ME1 LINE L1 5877 5891 -275 1699 146 78 20 chr10 28383088 28383383 -117205905 + AluSx SINE Alu 1 312 0 2208 113 3 7 chr10 28383384 28383693 -117205595 + AluSp SINE Alu 6 313 0 1018 225 21 55 chr10 28383693 28383930 -117205358 + L1ME1 LINE L1 5891 6122 -44 2264 108 0 0 chr10 28383930 28384227 -117205061 + AluSx SINE Alu 2 298 -14 1018 225 21 55 chr10 28384227 28384260 -117205028 + L1ME1 LINE L1 6122 6155 -11 671 206 63 0 chr10 28384281 28384407 -117204881 + FRAM SINE Alu 29 162 -14 2463 87 3 0 chr10 28384569 28384879 -117204409 + AluSq SINE Alu 1 311 -2 1813 169 140 3 chr10 28385612 28385955 -117203333 - MLT1B LTR MaLR 0 390 1 2222 125 0 3 chr10 28386016 28386329 -117202959 - AluSx SINE Alu 0 312 1 2239 119 0 3 chr10 28386336 28386647 -117202641 - AluSg SINE Alu 0 310 1 274 203 17 17 chr10 28386899 28386958 -117202330 + LTR33A LTR ERVL 457 515 -8 535 174 41 0 chr10 28386991 28387089 -117202199 + U13 snRNA snRNA 1 102 -2 802 184 14 0 chr10 28387113 28387254 -117202034 + FAM SINE Alu 23 165 -20 23 0 0 0 chr10 28387351 28387374 -117201914 + AT_rich Low_complexity Low_complexity 1 23 0 2152 115 3 0 chr10 28387674 28387978 -117201310 - AluSg SINE Alu -4 306 2 392 167 0 0 chr10 28387995 28388067 -117201221 + CT-rich Low_complexity Low_complexity 3 74 0 216 0 0 0 chr10 28388869 28388893 -117200395 + (CA)n Simple_repeat Simple_repeat 2 25 0 256 313 31 31 chr10 28388893 28389047 -117200241 + L1ME4a LINE L1 5631 5787 -334 2329 92 3 3 chr10 28389047 28389352 -117199936 + AluSx SINE Alu 1 305 -7 256 313 31 31 chr10 28389352 28389389 -117199899 + L1ME4a LINE L1 5786 5822 -299 1332 157 22 54 chr10 28389391 28389648 -117199640 + L1M1 LINE L1 5101 5354 -828 423 0 0 0 chr10 28389648 28389695 -117199593 + (CA)n Simple_repeat Simple_repeat 2 48 0 1332 157 22 54 chr10 28389695 28389779 -117199509 + L1M1 LINE L1 5354 5439 -743 1153 73 0 0 chr10 28389784 28389920 -117199368 + AluSq/x SINE Alu 1 136 -177 2018 125 48 0 chr10 28389920 28390215 -117199073 + AluSx SINE Alu 1 309 -3 1083 144 0 6 chr10 28390216 28390390 -117198898 + L1M1 LINE L1 5432 5604 -696 1833 183 0 3 chr10 28390392 28390693 -117198595 + AluJo SINE Alu 1 300 -12 189 0 0 0 chr10 28390716 28390737 -117198551 + (CA)n Simple_repeat Simple_repeat 2 22 0 248 193 72 24 chr10 28390743 28390826 -117198462 + L1ME4a LINE L1 5974 6060 -61 1722 134 94 11 chr10 28390878 28391153 -117198135 - AluJo SINE Alu -14 298 1 2367 106 0 0 chr10 28391202 28391513 -117197775 - AluSx SINE Alu -1 311 1 545 212 94 41 chr10 28391800 28391970 -117197318 + MLT1L LTR MaLR 433 611 -4 1450 221 27 22 chr10 28392228 28392599 -117196689 - MLT1B LTR MaLR -6 384 12 1903 164 3 13 chr10 28392704 28393016 -117196272 - AluSx SINE Alu -3 309 1 2188 113 3 0 chr10 28393130 28393422 -117195866 - AluSg SINE Alu -17 293 1 364 357 33 19 chr10 28393611 28393821 -117195467 - L2 LINE L2 -489 2825 2613 296 259 170 0 chr10 28393888 28394000 -117195288 - MIR SINE MIR -130 132 2 1962 160 3 0 chr10 28394315 28394621 -117194667 + AluJb SINE Alu 1 307 -5 1391 185 0 115 chr10 28394770 28395110 -117194178 + AluJo SINE Alu 2 302 0 2153 165 131 0 chr10 28395184 28395566 -117193722 + MSTB1 LTR MaLR 1 432 0 28 0 0 0 chr10 28395855 28395883 -117193405 + AT_rich Low_complexity Low_complexity 1 28 0 992 221 46 14 chr10 28396068 28396285 -117193003 + MER58A DNA MER1_type 1 224 0 256 224 0 0 chr10 28396294 28396343 -117192945 + MER5B DNA MER1_type 2 50 -128 4663 184 26 38 chr10 28396381 28397590 -117191698 - L1MA9 LINE L1 -30 6282 5089 300 229 0 144 chr10 28397593 28397711 -117191577 - MER5B DNA MER1_type -11 167 67 1543 96 10 0 chr10 28397865 28398064 -117191224 + AluSc SINE Alu 1 201 -108 1762 110 8 8 chr10 28398170 28398424 -117190864 + AluSx SINE Alu 56 309 -3 207 0 0 0 chr10 28398436 28398459 -117190829 + (TA)n Simple_repeat Simple_repeat 2 24 0 2183 118 0 0 chr10 28400304 28400592 -117188696 + AluSq SINE Alu 1 288 -25 1122 136 0 11 chr10 28400804 28400980 -117188308 + AluSq SINE Alu 1 174 -139 668 224 8 8 chr10 28401291 28401425 -117187863 - FLAM_A SINE Alu -1 141 8 1137 166 42 0 chr10 28401445 28401666 -117187622 - AluJo SINE Alu 0 309 81 1547 253 85 40 chr10 28401666 28402184 -117187104 - L1M4 LINE L1 -5988 554 14 1765 187 0 0 chr10 28402208 28402507 -117186781 - AluJo SINE Alu -8 304 6 180 330 27 71 chr10 28402523 28402635 -117186653 + MIR SINE MIR 53 159 -103 2064 109 3 0 chr10 28402663 28403000 -117186288 + AluSx SINE Alu 1 338 0 867 164 8 0 chr10 28403024 28403152 -117186136 + FLAM_C SINE Alu 1 129 -4 1634 106 0 5 chr10 28403193 28403410 -117185878 - AluSg/x SINE Alu -23 287 72 1568 200 0 7 chr10 28403573 28403868 -117185420 - AluJo SINE Alu -16 296 4 207 0 0 0 chr10 28403890 28403913 -117185375 + (TC)n Simple_repeat Simple_repeat 2 24 0 2025 79 41 38 chr10 28403913 28404203 -117185085 - AluY SINE Alu -13 298 8 24 0 0 0 chr10 28404542 28404566 -117184722 + AT_rich Low_complexity Low_complexity 1 24 0 1926 126 4 0 chr10 28404912 28405226 -117184062 + AluSc SINE Alu 1 315 0 1613 179 0 10 chr10 28405718 28406014 -117183274 + AluSx SINE Alu 1 293 -19 835 198 32 0 chr10 28406022 28406179 -117183109 + L1PB1 LINE L1 5988 6149 -2 1105 152 0 0 chr10 28406658 28406823 -117182465 + AluJb SINE Alu 144 308 -4 3710 202 34 37 chr10 28406823 28407764 -117181524 + L1M4 LINE L1 4325 5262 -884 937 154 0 19 chr10 28407764 28407778 -117181510 + AluSg/x SINE Alu 120 133 -177 2077 128 3 3 chr10 28407778 28408083 -117181205 + AluSx SINE Alu 1 305 -7 937 154 0 19 chr10 28408083 28408224 -117181064 + AluSg/x SINE Alu 133 272 -38 1086 182 28 0 chr10 28408369 28408387 -117180901 + L1M4 LINE L1 5278 5294 -890 2281 106 0 0 chr10 28408387 28408698 -117180590 + AluY SINE Alu 1 311 0 1086 182 28 0 chr10 28408698 28408918 -117180370 + L1M4 LINE L1 5294 5517 -667 526 215 42 103 chr10 28408937 28409108 -117180180 + MER3 DNA MER1_type 4 161 -48 2276 107 13 0 chr10 28409108 28409416 -117179872 + AluSx SINE Alu 1 312 0 526 215 42 103 chr10 28409416 28409458 -117179830 + MER3 DNA MER1_type 161 204 -5 1951 137 0 51 chr10 28409833 28409960 -117179328 + AluJo SINE Alu 1 133 -179 2282 112 0 0 chr10 28409960 28410256 -117179032 - AluSx SINE Alu -16 296 1 1951 137 0 51 chr10 28410256 28410442 -117178846 + AluJo SINE Alu 133 298 -14 2093 120 30 0 chr10 28410995 28411296 -117177992 - AluSx SINE Alu -2 310 1 180 77 0 0 chr10 28411627 28411653 -117177635 + (A)n Simple_repeat Simple_repeat 1 26 0 473 331 102 0 chr10 28411736 28411893 -117177395 - MER91A DNA MER1_type -23 173 1 1430 185 56 14 chr10 28412094 28412381 -117176907 + AluJo SINE Alu 1 299 -13 308 89 0 0 chr10 28412381 28412426 -117176862 + (GGA)n Simple_repeat Simple_repeat 1 45 0 345 157 13 50 chr10 28412486 28412645 -117176643 + T-rich Low_complexity Low_complexity 6 158 0 24 91 0 0 chr10 28412656 28412722 -117176566 + AT_rich Low_complexity Low_complexity 1 66 0 34 98 0 0 chr10 28412745 28412837 -117176451 + AT_rich Low_complexity Low_complexity 1 92 0 1120 198 39 4 chr10 28413130 28413387 -117175901 + L1MC3 LINE L1 7513 7778 -7 21 0 0 0 chr10 28413398 28413419 -117175869 + AT_rich Low_complexity Low_complexity 1 21 0 216 162 0 0 chr10 28414064 28414101 -117175187 + GA-rich Low_complexity Low_complexity 2 38 0 2556 53 3 0 chr10 28414904 28415208 -117174080 - AluY SINE Alu -6 305 1 1606 175 54 0 chr10 28415994 28416274 -117173014 + AluJo SINE Alu 1 295 -17 1118 302 40 30 chr10 28417198 28417695 -117171593 - MLT1J LTR MaLR -9 502 1 2412 88 0 3 chr10 28417899 28418207 -117171081 + AluSq SINE Alu 1 307 -6 209 213 0 0 chr10 28418515 28418562 -117170726 + (TA)n Simple_repeat Simple_repeat 1 47 0 212 264 34 20 chr10 28418690 28418838 -117170450 + (TA)n Simple_repeat Simple_repeat 1 150 0 389 190 13 0 chr10 28418965 28419044 -117170244 + LTR24C LTR ERV1 556 635 0 24 0 0 0 chr10 28419099 28419123 -117170165 + AT_rich Low_complexity Low_complexity 1 24 0 2095 96 13 35 chr10 28419140 28419454 -117169834 + AluSc SINE Alu 3 309 0 2378 57 7 17 chr10 28421267 28421568 -117167720 + AluY SINE Alu 1 298 -13 2219 109 10 10 chr10 28421638 28421950 -117167338 + AluSx SINE Alu 1 312 0 203 191 15 0 chr10 28422077 28422145 -117167143 + (TA)n Simple_repeat Simple_repeat 1 69 0 2550 188 81 14 chr10 28422176 28422730 -117166558 - LTR49 LTR ERV1 0 595 5 360 0 0 0 chr10 28422730 28422770 -117166518 + (TG)n Simple_repeat Simple_repeat 2 41 0 195 162 0 0 chr10 28423653 28423690 -117165598 + (TG)n Simple_repeat Simple_repeat 2 38 0 282 148 0 0 chr10 28423725 28423779 -117165509 + (TG)n Simple_repeat Simple_repeat 1 54 0 22 0 0 0 chr10 28423858 28423880 -117165408 + AT_rich Low_complexity Low_complexity 1 22 0 2883 62 0 0 chr10 28424139 28424480 -117164808 + L1PA7 LINE L1 5801 6141 -13 1487 205 72 11 chr10 28424926 28425287 -117164001 + LTR49 LTR ERV1 211 593 -2 1874 180 43 7 chr10 28425291 28425701 -117163587 + LTR49-int LTR ERV1 1 1327 -4619 2657 180 15 27 chr10 28425736 28426002 -117163286 + LTR49-int LTR ERV1 361 629 -5317 8305 53 2 0 chr10 28426002 28426966 -117162322 + LTR5 LTR ERVK 1 966 -3 2657 180 15 27 chr10 28426966 28427227 -117162061 + LTR49-int LTR ERV1 629 1476 -4470 2664 190 35 8 chr10 28427267 28427777 -117161511 + LTR49-int LTR ERV1 840 1363 -4968 1032 175 62 5 chr10 28427779 28427973 -117161315 - L1PA16 LINE L1 -3 6163 5959 1180 153 37 23 chr10 28428112 28428309 -117160979 + LTR49-int LTR ERV1 1372 1574 -4757 5654 108 26 2 chr10 28428309 28429116 -117160172 + L1MA1 LINE L1 5477 6302 0 1180 153 37 23 chr10 28429116 28429134 -117160154 + LTR49-int LTR ERV1 1574 1590 -4741 2021 128 3 3 chr10 28429420 28429710 -117159578 - AluSg SINE Alu -20 290 1 323 26 0 0 chr10 28431270 28431308 -117157980 - L1PA12 LINE L1 -351 5817 5780 2492 99 0 14 chr10 28431308 28431645 -117157643 + L1PA12 LINE L1 5830 6168 0 2011 71 26 11 chr10 28431797 28432066 -117157222 + AluY SINE Alu 39 311 0 989 224 49 109 chr10 28432378 28432775 -117156513 - MLT1A2 LTR MaLR -3 372 1 349 270 45 9 chr10 28432776 28432887 -117156401 + L1M4 LINE L1 3540 3654 -2492 446 271 32 72 chr10 28432940 28433191 -117156097 + L1M4 LINE L1 4644 4884 -1262 585 292 67 33 chr10 28433257 28433549 -117155739 - L2 LINE L2 -268 3045 2748 1568 104 0 42 chr10 28433749 28433923 -117155365 - L1P LINE L1 -959 5187 5025 1846 93 93 0 chr10 28433923 28434213 -117155075 - AluSg SINE Alu 0 314 1 1568 104 0 42 chr10 28434213 28434297 -117154991 - L1P LINE L1 -1121 5025 4939 6739 84 12 22 chr10 28434297 28434897 -117154391 + L1PA8 LINE L1 5184 5773 -399 2356 91 0 10 chr10 28434897 28435204 -117154084 + AluY SINE Alu 1 304 -7 6739 84 12 22 chr10 28435204 28435592 -117153696 + L1PA8 LINE L1 5773 6163 -9 32 26 0 0 chr10 28435599 28435638 -117153650 + AT_rich Low_complexity Low_complexity 1 39 0 1287 177 55 25 chr10 28436919 28437235 -117152053 + MER33 DNA MER1_type 1 318 -6 1276 149 0 0 chr10 28437717 28437905 -117151383 - AluSx SINE Alu -94 218 31 6339 135 94 23 chr10 28437905 28439649 -117149639 + pTR5 LTR ERV1 743 2295 -143 237 134 6 0 chr10 28439660 28439708 -117149580 - Alu SINE Alu -267 35 1 2273 126 0 0 chr10 28440253 28440563 -117148725 + AluSg SINE Alu 1 310 0 237 250 231 9 chr10 28440933 28441041 -117148247 - MIR SINE MIR -117 145 14 22 35 0 0 chr10 28442091 28442120 -117147168 + AT_rich Low_complexity Low_complexity 1 29 0 2488 75 0 3 chr10 28443124 28443431 -117145857 - AluY SINE Alu -5 306 1 330 161 145 65 chr10 28443614 28443738 -117145550 + MIR SINE MIR 95 228 -34 1193 226 73 35 chr10 28443744 28444058 -117145230 + MER31-int LTR ERV1 638 963 -3973 229 156 44 0 chr10 28444121 28444166 -117145122 + (CATATA)n Simple_repeat Simple_repeat 2 48 0 324 221 160 55 chr10 28444197 28444378 -117144910 + MER31-int LTR ERV1 1141 1340 -3596 1574 159 51 14 chr10 28444379 28444675 -117144613 + MER67A LTR ERV1 156 462 -81 182 266 202 9 chr10 28444772 28444881 -117144407 - L2 LINE L2 -1371 1943 1814 22 35 0 0 chr10 28445494 28445523 -117143765 + AT_rich Low_complexity Low_complexity 1 29 0 1668 97 0 0 chr10 28445935 28446151 -117143137 + AluSc SINE Alu 74 289 -20 2436 58 0 16 chr10 28446151 28446460 -117142828 + AluY SINE Alu 1 304 -7 2365 77 3 7 chr10 28446616 28446916 -117142372 - AluY SINE Alu -11 300 2 2133 114 0 7 chr10 28447150 28447458 -117141830 + AluSx SINE Alu 1 306 -6 22 35 0 0 chr10 28447979 28448008 -117141280 + AT_rich Low_complexity Low_complexity 1 29 0 2200 89 0 67 chr10 28448133 28448460 -117140828 + AluY SINE Alu 1 305 -6 2310 97 3 13 chr10 28448604 28448913 -117140375 - AluSc SINE Alu -3 306 1 2271 91 0 7 chr10 28448916 28449214 -117140074 - AluSg1 SINE Alu -13 296 1 23 0 0 0 chr10 28449699 28449722 -117139566 + AT_rich Low_complexity Low_complexity 1 23 0 2242 93 7 32 chr10 28449897 28450207 -117139081 - AluSp SINE Alu -11 302 1 1889 184 3 7 chr10 28450322 28450632 -117138656 - AluJb SINE Alu -3 309 1 215 368 61 0 chr10 28451997 28452111 -117137177 + MIR SINE MIR 80 200 -62 183 120 0 0 chr10 28452278 28452303 -117136985 - MIR SINE MIR -68 140 116 209 356 35 17 chr10 28454095 28454210 -117135078 - MIR SINE MIR -122 140 24 744 200 0 0 chr10 28454634 28454759 -117134529 + AluJb SINE Alu 2 126 -186 204 300 17 42 chr10 28456460 28456580 -117132708 - MIR SINE MIR -12 250 134 * 394 284 165 17 chr10 28456555 28456731 -117132557 - MIR SINE MIR -37 225 24 336 24 0 0 chr10 28457012 28457053 -117132235 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 1349 188 12 0 chr10 28459217 28459462 -117129826 - AluSx SINE Alu -29 283 36 2193 89 0 24 chr10 28459968 28460259 -117129029 + AluSq SINE Alu 7 290 -23 6829 68 2 5 chr10 28460446 28461325 -117127963 + L1PA8A LINE L1 5254 6130 -1 753 264 77 110 chr10 28462109 28462826 -117126462 + L2 LINE L2 2109 2801 -513 259 313 17 73 chr10 28462963 28463142 -117126146 + L2 LINE L2 2948 3116 -156 2040 93 42 39 chr10 28464514 28464824 -117124464 - AluSx SINE Alu -1 311 1 2307 127 41 120 chr10 28464905 28465370 -117123918 + MSTA LTR MaLR 1 428 0 1925 143 14 0 chr10 28465806 28466092 -117123196 + AluSq SINE Alu 1 290 -23 2343 105 0 3 chr10 28466095 28466401 -117122887 + AluSx SINE Alu 1 305 -7 223 154 15 31 chr10 28466611 28466676 -117122612 + (CAAA)n Simple_repeat Simple_repeat 1 64 0 859 134 10 139 chr10 28466725 28466926 -117122362 - MER2 DNA MER2_type -170 175 1 237 239 60 0 chr10 28467024 28467091 -117122197 + MER5A DNA MER1_type 31 101 -88 766 245 5 22 chr10 28467416 28467600 -117121688 + MIR SINE MIR 58 238 -24 249 333 30 85 chr10 28467681 28467754 -117121534 + L2 LINE L2 2842 2918 -354 1740 142 0 111 chr10 28467754 28467949 -117121339 - AluJo SINE Alu -6 306 164 2141 92 18 0 chr10 28467949 28468230 -117121058 - AluSq SINE Alu -27 286 1 1740 142 0 111 chr10 28468230 28468378 -117120910 - AluJo SINE Alu -148 164 1 249 333 30 85 chr10 28468378 28468574 -117120714 + L2 LINE L2 2918 3096 -176 409 111 0 0 chr10 28468717 28468771 -117120517 - Alu SINE Alu -254 55 2 180 0 26 79 chr10 28468984 28469022 -117120266 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 240 240 67 0 chr10 28469923 28469998 -117119290 - LTR40b LTR ERVL 0 462 383 345 305 49 59 chr10 28470002 28470205 -117119083 + LTR40a LTR ERVL 209 409 -110 283 310 0 0 chr10 28470203 28470261 -117119027 - LTR40a LTR ERVL -222 297 240 * 345 234 143 0 chr10 28470341 28470418 -117118870 - LTR40b LTR ERVL -293 169 82 2403 91 0 0 chr10 28470426 28470724 -117118564 + AluSx SINE Alu 1 298 -14 1855 165 0 10 chr10 28470734 28471025 -117118263 + AluSx SINE Alu 1 288 -24 21 0 0 0 chr10 28471025 28471046 -117118242 + AT_rich Low_complexity Low_complexity 1 21 0 975 67 8 0 chr10 28471279 28471398 -117117890 + AluY SINE Alu 9 128 -183 1766 199 67 3 chr10 28471398 28471789 -117117499 - Tigger6a DNA MER2_type -630 453 38 934 188 74 0 chr10 28472172 28472348 -117116940 + MER74A LTR ERVL 1 189 -369 1388 226 13 7 chr10 28472387 28472688 -117116600 + MER74A LTR ERVL 179 481 -77 287 318 45 23 chr10 28472955 28473087 -117116201 - MIR SINE MIR -114 148 14 2105 119 3 3 chr10 28473427 28473720 -117115568 + AluSg SINE Alu 1 293 -17 2186 107 0 20 chr10 28474522 28474822 -117114466 + AluSx SINE Alu 1 294 -18 2374 105 20 80 chr10 28475611 28476010 -117113278 + THE1C LTR MaLR 1 375 0 679 247 101 31 chr10 28476124 28476351 -117112937 + MIR SINE MIR 20 262 0 1912 158 7 3 chr10 28476441 28476738 -117112550 + AluJo SINE Alu 1 298 -14 494 222 0 9 chr10 28476752 28476860 -117112428 + MER104 DNA Tc2 3 109 -71 3603 241 48 34 chr10 28477086 28477106 -117112182 - L1 LINE L1 -2917 3229 3211 2427 98 0 6 chr10 28477106 28477421 -117111867 + AluSq SINE Alu 1 313 0 3603 241 48 34 chr10 28477421 28478824 -117110464 - L1 LINE L1 -2935 3211 1750 5137 160 62 30 chr10 28478852 28478977 -117110311 - L1PBb LINE L1 -4759 1445 1325 1937 125 24 20 chr10 28478977 28479272 -117110016 - AluSx SINE Alu -16 296 1 5137 160 62 30 chr10 28479272 28480548 -117108740 - L1PBb LINE L1 -4879 1325 1 2754 298 47 36 chr10 28480529 28482132 -117107156 - L1PBa LINE L1 -5240 1623 3 * 769 210 14 0 chr10 28482324 28482467 -117106821 - AluSq/x SINE Alu -167 145 1 341 217 0 0 chr10 28482590 28482650 -117106638 + MLT1H1 LTR MaLR 1 60 -495 878 204 66 15 chr10 28482653 28482849 -117106439 + AluJo SINE Alu 89 294 -18 1371 246 102 44 chr10 28482850 28483330 -117105958 + MLT1H1 LTR MaLR 48 555 0 2263 105 0 0 chr10 28483625 28483919 -117105369 + AluSc SINE Alu 1 294 -15 23 54 0 0 chr10 28484008 28484045 -117105243 + AT_rich Low_complexity Low_complexity 1 37 0 433 272 14 48 chr10 28484099 28484246 -117105042 + MIR SINE MIR 5 146 -116 836 182 8 0 chr10 28484252 28484384 -117104904 + AluJo SINE Alu 2 134 -178 393 254 51 8 chr10 28484389 28484507 -117104781 + MIR SINE MIR 136 258 -4 202 298 0 0 chr10 28484529 28484576 -117104712 + MIR SINE MIR 13 59 -203 345 278 41 0 chr10 28484780 28484877 -117104411 + L3 LINE CR1 1460 1560 -17 1291 132 0 0 chr10 28485280 28485462 -117103826 - AluJ SINE Alu -2 310 129 1685 179 0 13 chr10 28485470 28485771 -117103517 - AluJo SINE Alu -15 297 1 775 169 0 8 chr10 28485820 28485938 -117103350 - AluJ SINE Alu -192 120 4 1590 215 129 22 chr10 28486526 28487014 -117102274 - L1ME3A LINE L1 0 6170 5631 319 200 56 11 chr10 28487882 28487972 -117101316 - L1MC4 LINE L1 -6 8036 7943 1429 175 57 0 chr10 28487987 28488233 -117101055 - AluJb SINE Alu -52 260 1 403 196 125 107 chr10 28488251 28488419 -117100869 - L1MC4 LINE L1 -105 7937 7767 650 151 0 0 chr10 28488419 28488512 -117100776 + AluSx SINE Alu 3 95 -218 1638 99 14 5 chr10 28488529 28488752 -117100536 + AluSx SINE Alu 74 298 -14 632 187 33 169 chr10 28488753 28489084 -117100204 - L1MC4 LINE L1 -267 7775 7490 * 676 216 75 37 chr10 28489083 28489324 -117099964 - L1ME4a LINE L1 -295 5826 5577 427 250 35 81 chr10 28489424 28489596 -117099692 + L1MC4a LINE L1 7294 7457 -351 621 280 94 37 chr10 28489987 28490390 -117098898 - L1MC4 LINE L1 -4 8038 7613 27 29 0 0 chr10 28490598 28490632 -117098656 + AT_rich Low_complexity Low_complexity 1 34 0 859 153 0 0 chr10 28492223 28492354 -117096934 + AluJo SINE Alu 1 131 -181 1965 137 39 0 chr10 28492360 28492645 -117096643 + AluSx SINE Alu 3 298 -14 907 220 23 0 chr10 28492690 28492867 -117096421 + AluJo SINE Alu 118 298 -14 1428 162 165 13 chr10 28493032 28493335 -117095953 + L1MB7 LINE L1 5823 6171 -13 2223 118 0 3 chr10 28494560 28494865 -117094423 - AluSq SINE Alu -7 306 3 1608 179 24 30 chr10 28495804 28496101 -117093187 + AluJo SINE Alu 1 295 -17 569 230 0 0 chr10 28496119 28496219 -117093069 + FRAM SINE Alu 1 100 -76 1134 194 158 26 chr10 28496278 28496582 -117092706 + MER2 DNA MER2_type 1 344 0 2121 106 0 0 chr10 28496834 28497108 -117092180 - AluSx SINE Alu -38 274 1 870 157 0 15 chr10 28497514 28497648 -117091640 - FLAM_C SINE Alu -1 132 1 216 196 0 0 chr10 28497650 28497696 -117091592 + T-rich Low_complexity Low_complexity 2 47 0 2140 126 10 0 chr10 28497698 28498007 -117091281 - AluSp SINE Alu -1 312 1 1798 148 38 14 chr10 28498779 28499070 -117090218 + AluJb SINE Alu 1 298 -14 1223 112 0 0 chr10 28499120 28499290 -117089998 - AluSg/x SINE Alu -9 303 134 2142 119 3 0 chr10 28499346 28499648 -117089640 - AluSx SINE Alu -9 303 1 893 102 14 54 chr10 28500157 28500304 -117088984 + L1PB3 LINE L1 6011 6151 -3 24 32 0 0 chr10 28500306 28500337 -117088951 + AT_rich Low_complexity Low_complexity 1 31 0 570 113 38 0 chr10 28500426 28500506 -117088782 - AluSg/x SINE Alu -13 297 215 684 175 114 0 chr10 28500558 28500672 -117088616 - FLAM_A SINE Alu -6 127 1 2454 93 0 3 chr10 28500692 28501005 -117088283 - AluSq SINE Alu -1 312 1 2096 145 7 0 chr10 28501144 28501454 -117087834 - AluJb SINE Alu 0 312 1 1140 161 55 5 chr10 28501477 28501676 -117087612 + AluJb SINE Alu 83 291 -21 442 318 112 40 chr10 28501684 28502058 -117087230 - L2 LINE L2 -2659 655 255 1969 116 3 27 chr10 28502905 28503037 -117086251 + AluSx SINE Alu 6 140 -172 2144 116 0 28 chr10 28503037 28503357 -117085931 + AluSx SINE Alu 1 311 -1 1969 116 3 27 chr10 28503357 28503517 -117085771 + AluSx SINE Alu 140 291 -21 417 239 28 0 chr10 28504034 28504143 -117085145 - L1MC4 LINE L1 -5 8037 7926 490 152 168 0 chr10 28504237 28504362 -117084926 - L1ME1 LINE L1 -5 6161 6016 1225 184 88 33 chr10 28504373 28504704 -117084584 - L1ME1 LINE L1 -582 5602 5254 2400 56 10 13 chr10 28504722 28505025 -117084263 - AluY SINE Alu -9 302 1 2431 70 0 16 chr10 28505035 28505349 -117083939 - AluY SINE Alu -2 309 1 438 221 49 8 chr10 28505349 28505530 -117083758 - L1M4 LINE L1 -3931 2755 2525 1788 171 7 0 chr10 28505539 28505868 -117083420 + AluSx SINE Alu 1 331 0 1089 228 134 55 chr10 28505909 28506691 -117082597 - L1M4 LINE L1 -4706 1940 1107 2080 134 3 7 chr10 28507043 28507350 -117081938 - AluSx SINE Alu -6 306 1 607 149 30 0 chr10 28507467 28507635 -117081653 + (TA)n Simple_repeat Simple_repeat 1 173 0 1530 130 130 16 chr10 28508307 28508560 -117080728 - AluSg SINE Alu -15 295 14 306 250 176 27 chr10 28508728 28508957 -117080331 - LTR41 LTR ERVL 0 795 510 2377 88 3 0 chr10 28509560 28509854 -117079434 - AluSg SINE Alu -15 295 1 857 174 12 124 chr10 28509885 28509972 -117079316 - AluJo SINE Alu -92 220 125 2235 118 0 7 chr10 28509972 28510276 -117079012 - AluSx SINE Alu -8 304 3 2195 92 6 47 chr10 28510286 28510603 -117078685 - AluSx SINE Alu -7 305 2 857 174 12 124 chr10 28510603 28510746 -117078542 - AluJo SINE Alu -197 115 6 326 156 32 50 chr10 28510757 28510837 -117078451 + LTR41 LTR ERVL 440 771 0 21 0 0 0 chr10 28510918 28510939 -117078349 + AT_rich Low_complexity Low_complexity 1 21 0 886 149 0 0 chr10 28510941 28511062 -117078226 - FLAM_C SINE Alu -12 121 1 181 299 0 30 chr10 28511219 28511286 -117078002 + L2 LINE L2 3201 3265 -7 2430 56 3 17 chr10 28511554 28511856 -117077432 + AluY SINE Alu 1 298 -13 1595 118 77 37 chr10 28512357 28512629 -117076659 - AluSx SINE Alu -1 311 29 2046 126 7 13 chr10 28512974 28513283 -117076005 + AluJb SINE Alu 1 307 -5 1343 140 212 8 chr10 28514714 28514964 -117074324 + AluJo SINE Alu 2 302 0 2351 110 0 0 chr10 28515103 28515411 -117073877 + AluSq SINE Alu 1 308 -5 2513 37 0 3 chr10 28515545 28515841 -117073447 + AluY SINE Alu 1 295 -16 885 111 8 8 chr10 28516083 28516209 -117073079 + FLAM_C SINE Alu 1 126 -17 200 217 0 0 chr10 28516241 28516287 -117073001 + A-rich Low_complexity Low_complexity 1 46 0 1761 163 3 14 chr10 28516441 28516757 -117072531 + AluSx SINE Alu 1 313 0 1799 102 81 35 chr10 28516916 28517200 -117072088 - AluY SINE Alu -14 297 1 2106 126 0 0 chr10 28517200 28517486 -117071802 - AluSx SINE Alu -18 294 9 2204 123 0 7 chr10 28517602 28517912 -117071376 - AluSx SINE Alu -4 308 1 1967 155 3 3 chr10 28518711 28519008 -117070280 - AluSx SINE Alu -15 297 1 445 222 0 9 chr10 28519255 28519363 -117069925 - MER104 DNA Tc2 -71 109 3 1949 155 7 3 chr10 28519377 28519674 -117069614 - AluJo SINE Alu -14 298 1 692 247 101 31 chr10 28519764 28519991 -117069297 - MIR SINE MIR 0 262 20 2281 95 20 80 chr10 28520105 28520504 -117068784 - THE1C LTR MaLR 0 375 1 2186 107 0 20 chr10 28521293 28521593 -117067695 - AluSx SINE Alu -18 294 1 2203 109 3 3 chr10 28522395 28522688 -117066600 - AluSg SINE Alu -17 293 1 376 306 106 15 chr10 28523028 28523227 -117066061 + MIR SINE MIR 14 230 -32 1763 174 7 0 chr10 28523265 28523580 -117065708 - AluJb SINE Alu 0 317 1 706 120 19 0 chr10 28523976 28524084 -117065204 - AluSx SINE Alu -5 304 195 1100 113 0 0 chr10 28524089 28524230 -117065058 - AluSx SINE Alu -171 141 1 1796 190 7 3 chr10 28524579 28524884 -117064404 - AluJo SINE Alu -6 306 1 739 132 0 0 chr10 28525966 28526072 -117063216 + U6 snRNA snRNA 1 106 -1 1794 157 10 17 chr10 28526308 28526601 -117062687 + AluJo SINE Alu 1 291 -21 289 336 74 7 chr10 28527040 28527189 -117062099 - MIR SINE MIR -47 215 57 2384 107 0 7 chr10 28527322 28527632 -117061656 + AluSg SINE Alu 1 308 -2 21 0 0 0 chr10 28528209 28528230 -117061058 + AT_rich Low_complexity Low_complexity 1 21 0 2170 157 33 28 chr10 28528260 28528688 -117060600 - Tigger2a DNA MER2_type 0 434 5 2536 69 0 0 chr10 28528995 28529298 -117059990 + AluSg SINE Alu 1 303 -7 204 280 0 0 chr10 28529357 28529407 -117059881 - MER91 DNA MER1_type -62 128 79 2197 118 0 13 chr10 28529503 28529808 -117059480 - AluSq SINE Alu -12 301 1 2205 105 6 16 chr10 28530147 28530461 -117058827 - AluSp SINE Alu -2 311 1 651 275 7 0 chr10 28530480 28530629 -117058659 - MER58A DNA MER1_type 0 151 2 821 144 0 8 chr10 28530802 28530952 -117058336 - FLAM_C SINE Alu 0 149 1 197 240 82 111 chr10 28531213 28531384 -117057904 - L2 LINE L2 -787 2527 2362 21 0 0 0 chr10 28531605 28531626 -117057662 + AT_rich Low_complexity Low_complexity 1 21 0 348 321 124 19 chr10 28531646 28531855 -117057433 - MIR SINE MIR -16 246 16 307 116 13 247 chr10 28532254 28532358 -117056930 - L1P5 LINE L1 -279 5875 5819 2257 89 3 0 chr10 28532358 28532649 -117056639 + AluY SINE Alu 1 292 -19 307 116 13 247 chr10 28532649 28532702 -117056586 - L1P5 LINE L1 -335 5819 5755 1917 157 0 4 chr10 28534205 28534518 -117054770 - AluSg SINE Alu 0 312 1 2096 130 3 0 chr10 28534520 28534819 -117054469 - AluSx SINE Alu -9 303 4 6385 216 55 24 chr10 28537121 28537831 -117051457 - L1 LINE L1 -2234 3912 3226 2424 96 0 6 chr10 28537831 28538144 -117051144 + AluSq SINE Alu 3 313 0 6385 216 55 24 chr10 28538144 28539547 -117049741 - L1 LINE L1 -2920 3226 1750 4767 161 60 30 chr10 28539575 28539700 -117049588 - L1PBb LINE L1 -4759 1445 1325 1926 153 24 0 chr10 28539700 28539995 -117049293 - AluSx SINE Alu -10 302 1 4767 161 60 30 chr10 28539995 28541272 -117048016 - L1PBb LINE L1 -4879 1325 1 2297 311 37 27 chr10 28541253 28542857 -117046431 - L1PBa LINE L1 -5240 1623 3 * 2552 41 0 29 chr10 28542920 28543234 -117046054 + AluY SINE Alu 1 305 -6 2283 108 0 3 chr10 28543429 28543724 -117045564 + AluSg SINE Alu 1 294 -16 1980 152 17 0 chr10 28543974 28544271 -117045017 - AluSx SINE Alu -10 302 1 1549 194 60 0 chr10 28544271 28544554 -117044734 - AluJo SINE Alu -8 304 5 754 173 0 0 chr10 28544785 28544912 -117044376 + FLAM_C SINE Alu 1 127 -6 2147 125 0 10 chr10 28545171 28545476 -117043812 - AluSg SINE Alu -2 308 7 1870 131 60 35 chr10 28545927 28546293 -117042995 - THE1C LTR MaLR 0 375 1 2159 146 33 5 chr10 28546570 28546961 -117042327 + MSTA LTR MaLR 1 402 -26 263 125 0 0 chr10 28546994 28547034 -117042254 + MSTA LTR MaLR 389 428 0 2266 95 3 0 chr10 28547298 28547583 -117041705 + AluSx SINE Alu 12 297 -15 23 33 0 0 chr10 28547619 28547649 -117041639 + AT_rich Low_complexity Low_complexity 1 30 0 2255 98 13 3 chr10 28548233 28548538 -117040750 + AluSc SINE Alu 1 308 -1 186 71 0 0 chr10 28548640 28548668 -117040620 + (T)n Simple_repeat Simple_repeat 1 28 0 395 263 169 78 chr10 28549041 28549361 -117039927 - L2 LINE L2 -18 3295 2947 228 167 24 0 chr10 28549917 28549959 -117039329 - MER57A LTR ERV1 -66 337 295 2358 103 3 6 chr10 28550774 28551086 -117038202 + AluSx SINE Alu 1 311 -1 2277 107 33 0 chr10 28551336 28551635 -117037653 + AluSx SINE Alu 1 309 -3 486 198 72 54 chr10 28551868 28552011 -117037277 - MER5A DNA MER1_type -40 149 4 1660 137 27 34 chr10 28552542 28552834 -117036454 + AluJb SINE Alu 11 300 -12 2232 101 0 17 chr10 28554178 28554476 -117034812 - AluSx SINE Alu -19 293 1 2038 111 56 0 chr10 28554476 28554763 -117034525 - AluSx SINE Alu -6 306 3 238 268 0 0 chr10 28554810 28554866 -117034422 - Charlie1 DNA MER1_type 0 2761 2706 359 286 103 33 chr10 28554955 28555161 -117034127 - L1ME3A LINE L1 -207 5963 5744 2125 110 0 7 chr10 28555180 28555510 -117033778 + AluY SINE Alu 1 311 0 2166 96 3 7 chr10 28555518 28555811 -117033477 + AluSc SINE Alu 1 292 -17 227 196 0 0 chr10 28555871 28555927 -117033361 - Charlie1 DNA MER1_type -76 2685 2630 376 266 144 6 chr10 28555980 28556153 -117033135 - Charlie1 DNA MER1_type -2562 199 3 2424 94 0 0 chr10 28556428 28556737 -117032551 - AluSc SINE Alu 0 309 1 192 40 0 0 chr10 28556883 28556908 -117032380 + (CA)n Simple_repeat Simple_repeat 2 26 0 2111 139 10 0 chr10 28557593 28557896 -117031392 - AluSq SINE Alu -7 306 1 2272 102 0 0 chr10 28557928 28558221 -117031067 + AluSx SINE Alu 13 305 -7 200 254 42 56 chr10 28558365 28558436 -117030852 - L2 LINE L2 -1056 2258 2189 256 379 52 26 chr10 28559331 28559484 -117029804 + L2 LINE L2 2573 2729 -585 250 282 122 30 chr10 28559663 28559794 -117029494 + L2 LINE L2 2912 3054 -218 1855 131 50 0 chr10 28559807 28560089 -117029199 - AluSx SINE Alu -14 298 3 207 277 0 0 chr10 28560112 28560159 -117029129 + L2 LINE L2 3221 3267 -5 436 171 0 34 chr10 28560803 28560891 -117028397 + AluJ/FRAM SINE Alu 217 301 -11 28 0 0 0 chr10 28560899 28560927 -117028361 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr10 28561075 28561097 -117028191 + AT_rich Low_complexity Low_complexity 1 22 0 225 0 0 0 chr10 28561263 28561288 -117028000 + (TTTTTG)n Simple_repeat Simple_repeat 5 29 0 2454 85 3 0 chr10 28564146 28564453 -117024835 - AluSg SINE Alu -2 308 1 231 133 0 0 chr10 28565472 28565517 -117023771 + (ATG)n Simple_repeat Simple_repeat 1 45 0 701 250 75 48 chr10 28565691 28566023 -117023265 + L1ME LINE L1 5379 5659 -462 2002 111 7 0 chr10 28566352 28566654 -117022634 + AluSx SINE Alu 1 304 0 207 0 0 0 chr10 28566669 28566692 -117022596 + (TAG)n Simple_repeat Simple_repeat 1 23 0 2133 116 7 7 chr10 28566752 28567055 -117022233 - AluSq SINE Alu -10 303 1 25 0 0 0 chr10 28567709 28567734 -117021554 + AT_rich Low_complexity Low_complexity 1 25 0 200 302 0 0 chr10 28567774 28567837 -117021451 + T-rich Low_complexity Low_complexity 1 63 0 421 268 179 37 chr10 28568170 28568416 -117020872 - L2 LINE L2 -1407 1907 1627 2236 126 0 0 chr10 28568951 28569252 -117020036 - AluSx SINE Alu -11 301 1 808 256 18 27 chr10 28569527 28569746 -117019542 + MIR SINE MIR 32 248 -14 27 62 0 0 chr10 28570243 28570291 -117018997 + AT_rich Low_complexity Low_complexity 1 48 0 1879 161 3 10 chr10 28570300 28570605 -117018683 + AluJo SINE Alu 1 303 -9 1682 164 16 131 chr10 28571104 28571424 -117017864 - L1M4 LINE L1 -864 5282 5050 1684 114 40 120 chr10 28571424 28571611 -117017677 - AluSx SINE Alu -13 299 147 2305 97 0 0 chr10 28571611 28571922 -117017366 - AluY SINE Alu 0 311 1 1684 114 40 120 chr10 28571922 28572059 -117017229 - AluSx SINE Alu -165 147 1 1682 164 16 131 chr10 28572059 28572288 -117017000 - L1M4 LINE L1 -1096 5050 4796 714 190 7 0 chr10 28572322 28572459 -117016829 - L1MEc LINE L1 -4274 2122 1985 376 255 69 22 chr10 28572530 28572806 -117016482 - L1MEc LINE L1 -4904 1357 1000 1670 272 83 37 chr10 28572816 28573333 -117015955 - L1MEc LINE L1 -5651 745 190 2311 105 0 3 chr10 28573333 28573646 -117015642 - AluSx SINE Alu 0 312 1 1670 272 83 37 chr10 28573646 28573779 -117015509 - L1MEc LINE L1 -6206 190 65 459 318 62 88 chr10 28573794 28574146 -117015142 + L2 LINE L2 2930 3272 0 501 307 84 13 chr10 28574608 28574917 -117014371 - L1ME4a LINE L1 -283 5838 5508 2335 87 0 7 chr10 28574924 28575222 -117014066 - AluSg SINE Alu -14 296 1 2204 107 0 7 chr10 28575728 28576027 -117013261 - AluSx SINE Alu -15 297 1 29 47 0 0 chr10 28576524 28576567 -117012721 + AT_rich Low_complexity Low_complexity 1 43 0 197 277 0 0 chr10 28576678 28576725 -117012563 + L2 LINE L2 3226 3272 0 219 192 39 64 chr10 28578065 28578143 -117011145 + MIR SINE MIR 176 251 -11 428 279 84 6 chr10 28580442 28580621 -117008667 - L2 LINE L2 -410 2904 2712 26 64 0 0 chr10 28580932 28580979 -117008309 + AT_rich Low_complexity Low_complexity 1 47 0 1639 84 0 50 chr10 28581287 28581525 -117007763 - AluY SINE Alu -6 305 80 2127 124 0 13 chr10 28581554 28581728 -117007560 - AluSx SINE Alu -5 307 137 2300 105 0 3 chr10 28581728 28582041 -117007247 - AluSx SINE Alu 0 312 1 2127 124 0 13 chr10 28582041 28582173 -117007115 - AluSx SINE Alu -175 137 5 21 0 0 0 chr10 28582564 28582585 -117006703 + AT_rich Low_complexity Low_complexity 1 21 0 2561 162 44 25 chr10 28582664 28583182 -117006106 - L1MB8 LINE L1 0 6178 5651 25 31 0 0 chr10 28583604 28583636 -117005652 + AT_rich Low_complexity Low_complexity 1 32 0 21 36 0 0 chr10 28583666 28583694 -117005594 + AT_rich Low_complexity Low_complexity 1 28 0 693 267 24 34 chr10 28584320 28584526 -117004762 - MIR SINE MIR -24 238 35 758 224 22 22 chr10 28584802 28584985 -117004303 - MER58A DNA MER1_type -4 220 38 2116 124 6 39 chr10 28585600 28585787 -117003501 - MER46B DNA MER2_type -2495 236 190 2427 45 38 3 chr10 28585787 28586079 -117003209 - AluY SINE Alu -9 302 1 2116 124 6 39 chr10 28586079 28586242 -117003046 - MER46B DNA MER2_type -2541 190 23 1449 179 97 24 chr10 28586242 28586571 -117002717 - MER47A DNA MER2_type 0 366 14 335 246 0 0 chr10 28586582 28586651 -117002637 - MER47A DNA MER2_type -297 69 1 584 180 45 0 chr10 28586849 28586960 -117002328 - L1M3 LINE L1 -404 5779 5664 1869 128 75 0 chr10 28587317 28587598 -117001690 + AluSx SINE Alu 2 303 -9 1648 182 7 4 chr10 28588928 28589203 -117000085 + AluJo SINE Alu 5 280 -32 204 40 0 0 chr10 28589203 28589228 -117000060 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 261 0 0 0 chr10 28590385 28590414 -116998874 + (TG)n Simple_repeat Simple_repeat 2 30 0 499 81 0 14 chr10 28590434 28590508 -116998780 + MER34C LTR ERV1 424 496 -89 1903 125 26 42 chr10 28591034 28591346 -116997942 - AluSx SINE Alu -5 307 1 1928 119 16 3 chr10 28591965 28592268 -116997020 - L1PA13 LINE L1 -3 6160 5854 1759 102 27 5 chr10 28592269 28592690 -116996598 + L1P4 LINE L1 5067 5496 -665 * 3081 139 28 11 chr10 28592677 28593245 -116996043 + L1M2 LINE L1 5219 5797 -503 480 282 176 0 chr10 28593217 28593405 -116995883 + L1PA16 LINE L1 5936 6156 -10 * 1991 135 3 10 chr10 28593433 28593730 -116995558 + AluSq SINE Alu 1 295 -18 2067 149 95 46 chr10 28593731 28594227 -116995061 + L1MA5 LINE L1 5776 6295 -5 398 259 202 6 chr10 28594257 28594436 -116994852 + MLT1G1 LTR MaLR 78 251 -279 * 559 234 69 7 chr10 28594433 28594578 -116994710 + MLT1G1 LTR MaLR 429 582 -13 256 305 10 0 chr10 28594878 28594976 -116994312 - MLT1G3 LTR MaLR -180 415 228 1754 143 16 147 chr10 28594980 28595136 -116994152 - L1 LINE L1 -908 5238 5063 2091 68 0 15 chr10 28595136 28595399 -116993889 - AluY SINE Alu -52 259 1 1754 143 16 147 chr10 28595399 28595738 -116993550 - L1 LINE L1 -1083 5063 4808 2268 86 24 0 chr10 28595960 28596252 -116993036 + AluY SINE Alu 1 299 -12 30 27 0 0 chr10 28597215 28597252 -116992036 + AT_rich Low_complexity Low_complexity 1 37 0 1117 165 5 31 chr10 28597294 28597488 -116991800 - AluJo SINE Alu -123 189 1 420 216 222 6 chr10 28597606 28597768 -116991520 - L1ME1 LINE L1 -4 6162 5966 1730 119 84 21 chr10 28597817 28598102 -116991186 + AluSg SINE Alu 1 303 -7 1775 157 3 20 chr10 28598105 28598405 -116990883 + AluJo SINE Alu 1 295 -17 200 191 0 0 chr10 28598437 28598479 -116990809 + (TG)n Simple_repeat Simple_repeat 1 42 0 379 337 86 6 chr10 28598863 28599026 -116990262 - MIR3 SINE MIR -3 205 30 23 0 0 0 chr10 28600084 28600107 -116989181 + AT_rich Low_complexity Low_complexity 1 23 0 437 189 75 9 chr10 28600820 28600926 -116988362 - L1MA9 LINE L1 -37 6275 6163 1776 183 10 0 chr10 28601560 28601861 -116987427 - AluSx SINE Alu -8 304 1 927 224 0 0 chr10 28602962 28603127 -116986161 + FAM SINE Alu 1 165 -10 1963 138 0 47 chr10 28603586 28603906 -116985382 + AluJo SINE Alu 1 305 -7 2262 101 0 3 chr10 28605255 28605553 -116983735 + AluSg SINE Alu 1 297 -13 26 50 0 0 chr10 28606342 28606382 -116982906 + AT_rich Low_complexity Low_complexity 1 40 0 2037 130 3 10 chr10 28606719 28607018 -116982270 - AluSx SINE Alu -11 301 5 245 298 126 95 chr10 28607950 28608303 -116980985 + L2 LINE L2 2745 3108 -164 561 229 43 0 chr10 28609388 28609528 -116979760 - L1MC4 LINE L1 -141 7901 7756 1586 208 83 19 chr10 28609543 28610066 -116979222 - L1MC4 LINE L1 -332 7710 7005 2971 214 40 64 chr10 28610081 28611026 -116978262 - L1MD3 LINE L1 -1 8038 7133 451 175 21 21 chr10 28611077 28611174 -116978114 - L1MC4 LINE L1 -1041 7001 6905 324 138 50 75 chr10 28611186 28611242 -116978046 - L1MC4 LINE L1 -1507 6535 6480 3792 162 57 48 chr10 28611242 28612096 -116977192 - MER6 DNA MER2_type -3 862 1 324 138 50 75 chr10 28612096 28612119 -116977169 - L1MC4 LINE L1 -1562 6480 6458 2071 182 46 116 chr10 28612447 28613105 -116976183 + LTR9 LTR ERV1 1 612 0 495 214 251 35 chr10 28613242 28613361 -116975927 - L1M4 LINE L1 -1489 4657 4565 2151 83 3 21 chr10 28613361 28613672 -116975616 - AluY SINE Alu 0 306 1 495 214 251 35 chr10 28613672 28614066 -116975222 - L1M4 LINE L1 -1581 4565 4032 801 187 22 0 chr10 28614109 28614248 -116975040 - MLT1E1 LTR MaLR 0 654 513 712 206 36 24 chr10 28614255 28614620 -116974668 + LTR9-int LTR ERV1 196 684 -5914 299 159 14 29 chr10 28614979 28615048 -116974240 + LTR9-int LTR ERV1 743 810 -5788 1901 78 19 183 chr10 28616376 28616787 -116972501 - LTR14A LTR ERVK 0 344 1 2134 118 0 0 chr10 28617827 28618114 -116971174 - AluSc SINE Alu -22 287 1 592 214 19 0 chr10 28618122 28618225 -116971063 - FLAM_C SINE Alu -36 107 3 347 328 6 70 chr10 28618393 28618564 -116970724 + MER4A-int LTR ERV1 2549 2708 -4093 264 270 43 60 chr10 28619326 28619511 -116969777 + MER4A-int LTR ERV1 4561 4742 -3014 1207 316 57 44 chr10 28620501 28621527 -116967761 + MER4A-int LTR ERV1 5633 6671 -451 399 41 0 0 chr10 28621885 28621934 -116967354 + (TG)n Simple_repeat Simple_repeat 2 50 0 480 272 72 31 chr10 28621937 28622132 -116967156 + MER4A-int LTR ERV1 6395 6597 -1 2173 123 0 38 chr10 28622138 28622479 -116966809 + MER4A LTR ERV1 1 328 -336 475 72 0 29 chr10 28622570 28622639 -116966649 + MER4A LTR ERV1 356 422 -242 2160 87 7 21 chr10 28622665 28622954 -116966334 + AluSp SINE Alu 13 297 -16 528 175 196 35 chr10 28622975 28623118 -116966170 + MER4C LTR ERV1 300 465 0 770 178 109 83 chr10 28623120 28623396 -116965892 + MER4-int LTR ERV1 1 283 -6315 462 201 120 27 chr10 28623463 28623647 -116965641 + MER4-int LTR ERV1 473 673 -5925 890 168 0 0 chr10 28625498 28625629 -116963659 - FLAM_C SINE Alu -1 132 2 262 196 0 0 chr10 28625753 28625804 -116963484 + MER4A-int LTR ERV1 3104 3154 -1800 8201 20 0 0 chr10 28626966 28628540 -116960748 - L1PA4 LINE L1 -16 6139 4566 568 339 42 58 chr10 28629265 28629932 -116959356 + MER4A-int LTR ERV1 2139 2794 -1853 1359 324 51 37 chr10 28630367 28631384 -116957904 + MER4A-int LTR ERV1 5633 6663 -459 768 196 22 80 chr10 28631751 28631975 -116957313 + MER4A-int LTR ERV1 6385 6595 -3 1999 143 9 59 chr10 28631984 28632380 -116956908 + MER4A LTR ERV1 1 224 -241 298 218 0 0 chr10 28632637 28632692 -116956596 + MER4-int LTR ERV1 750 804 -5794 2732 159 16 26 chr10 28632792 28633245 -116956043 + MER83 LTR ERV1 1 448 0 2401 63 10 0 chr10 28635150 28635453 -116953835 - AluY SINE Alu -5 306 1 1955 121 0 17 chr10 28635910 28636225 -116953063 - AluSx SINE Alu 0 310 1 180 0 26 79 chr10 28636437 28636475 -116952813 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 240 240 67 0 chr10 28637376 28637451 -116951837 - LTR40a LTR ERVL 0 519 440 345 305 49 59 chr10 28637455 28637658 -116951630 + LTR40a LTR ERVL 209 409 -110 297 293 0 0 chr10 28637656 28637714 -116951574 - LTR40a LTR ERVL -222 297 240 * 356 216 196 61 chr10 28637795 28637879 -116951409 - LTR40a LTR ERVL -351 168 97 2422 90 0 0 chr10 28637879 28638179 -116951109 + AluSx SINE Alu 1 300 -12 356 216 196 61 chr10 28638179 28638242 -116951046 - LTR40a LTR ERVL -422 97 1 334 0 43 0 chr10 28638505 28638551 -116950737 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 1832 136 4 4 chr10 28638562 28638834 -116950454 - AluSx SINE Alu -40 272 1 1541 176 46 40 chr10 28638867 28639169 -116950119 + AluJo SINE Alu 1 304 -8 377 282 86 21 chr10 28639364 28639598 -116949690 + L1MEc LINE L1 1390 1604 -4780 310 281 45 0 chr10 28640304 28640393 -116948895 + L1 LINE L1 4739 4831 -1315 1677 157 10 33 chr10 28641319 28641624 -116947664 - AluJo SINE Alu -14 298 1 414 185 0 0 chr10 28642110 28642191 -116947097 - AluS SINE Alu -4 306 226 274 180 101 34 chr10 28642231 28642320 -116946968 + L1P LINE L1 3878 3972 -2174 1669 225 33 110 chr10 28642386 28642985 -116946303 - MER74A LTR ERVL -5 553 1 1891 158 66 64 chr10 28643391 28643829 -116945459 + Tigger6a DNA MER2_type 38 476 -607 2391 147 59 17 chr10 28643940 28644315 -116944973 - MSTB LTR MaLR 0 426 31 1865 141 75 36 chr10 28644315 28644676 -116944612 - THE1C LTR MaLR 0 375 1 2391 147 59 17 chr10 28644676 28644709 -116944579 - MSTB LTR MaLR -395 31 1 354 199 17 152 chr10 28644718 28644949 -116944339 + L1MC5 LINE L1 7382 7581 -380 2034 111 0 0 chr10 28644951 28645222 -116944066 + AluSg1 SINE Alu 1 271 -38 198 91 0 0 chr10 28645231 28645264 -116944024 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 989 149 0 0 chr10 28695376 28695524 -116893764 + AluJb SINE Alu 149 296 -16 229 184 0 0 chr10 28695524 28695562 -116893726 + Tigger4(Zombi) DNA MER2_type 41 78 -2653 1877 107 16 0 chr10 28695563 28695816 -116893472 + AluSx SINE Alu 30 286 -26 1441 164 59 12 chr10 28696110 28696366 -116892922 + AluJb SINE Alu 11 278 -34 2179 84 32 3 chr10 28698144 28698428 -116890860 + AluSq SINE Alu 1 292 -21 2102 120 7 23 chr10 28698890 28699191 -116890097 + AluSx SINE Alu 1 296 -16 1920 125 14 4 chr10 28701020 28701342 -116887946 - AluSq SINE Alu 0 325 1 2534 79 0 0 chr10 28701431 28701735 -116887553 - AluSc SINE Alu -4 305 2 2150 82 43 0 chr10 28701994 28702275 -116887013 + AluSp SINE Alu 2 294 -19 2297 113 6 0 chr10 28703182 28703493 -116885795 - AluSq SINE Alu 0 313 1 216 97 0 0 chr10 28703744 28703775 -116885513 + (TCCC)n Simple_repeat Simple_repeat 4 34 0 449 17 0 17 chr10 28703786 28703845 -116885443 + (TG)n Simple_repeat Simple_repeat 2 59 0 1563 117 13 9 chr10 28703891 28704121 -116885167 + AluSg/x SINE Alu 73 303 -7 393 96 0 0 chr10 28704121 28704173 -116885115 - U2 snRNA snRNA -136 52 1 542 295 46 72 chr10 28704192 28704582 -116884706 + MLT1J LTR MaLR 132 511 0 2332 86 3 10 chr10 28704641 28704945 -116884343 + AluSp SINE Alu 1 302 -11 2058 120 0 3 chr10 28705001 28705323 -116883965 + AluSx SINE Alu 1 321 0 2422 72 0 0 chr10 28705388 28705681 -116883607 + AluSc SINE Alu 1 293 -16 2244 97 10 0 chr10 28706593 28706883 -116882405 + AluSp SINE Alu 1 293 -20 236 240 132 66 chr10 28707098 28707219 -116882069 - MIR SINE MIR -77 185 57 29 47 0 0 chr10 28707688 28707731 -116881557 + AT_rich Low_complexity Low_complexity 1 43 0 1774 147 56 3 chr10 28708318 28708603 -116880685 - AluSx SINE Alu -12 300 1 21 0 0 0 chr10 28708614 28708635 -116880653 + AT_rich Low_complexity Low_complexity 1 21 0 367 301 30 38 chr10 28708798 28708931 -116880357 - L2 LINE L2 -4 3268 3137 2166 110 7 0 chr10 28709502 28709811 -116879477 + AluY SINE Alu 1 311 0 1117 121 0 12 chr10 28709861 28710027 -116879261 - AluSg/x SINE Alu -12 298 135 1373 128 92 12 chr10 28710430 28710681 -116878607 + AluY SINE Alu 33 303 -8 4020 75 69 4 chr10 28710712 28711109 -116878179 + MER41A LTR ERV1 1 441 -113 2256 99 0 43 chr10 28711109 28711431 -116877857 - AluSx SINE Alu -4 308 1 4020 75 69 4 chr10 28711431 28711553 -116877735 + MER41A LTR ERV1 441 554 0 1472 193 37 3 chr10 28711564 28711859 -116877429 + AluJo SINE Alu 1 305 -7 1913 119 0 0 chr10 28712198 28712451 -116876837 + AluSx SINE Alu 5 257 -55 325 159 0 63 chr10 28712606 28712669 -116876619 - L2 LINE L2 0 3313 3255 1761 143 16 48 chr10 28713643 28713958 -116875330 - AluJo SINE Alu -6 306 2 2319 107 0 7 chr10 28714134 28714442 -116874846 + AluSq SINE Alu 5 310 -3 798 132 0 9 chr10 28714492 28714606 -116874682 - FLAM_C SINE Alu -25 118 6 994 174 17 6 chr10 28714656 28714828 -116874460 + FAM SINE Alu 2 175 0 2586 62 0 0 chr10 28715519 28715828 -116873460 + AluY SINE Alu 1 309 -2 835 171 185 38 chr10 28716292 28716503 -116872785 - AluSx SINE Alu -70 242 1 1341 176 77 15 chr10 28716601 28716874 -116872414 - AluJo SINE Alu -22 290 1 22 56 0 0 chr10 28716964 28717000 -116872288 + AT_rich Low_complexity Low_complexity 1 36 0 1323 167 13 9 chr10 28717013 28717241 -116872047 + AluJb SINE Alu 3 231 -81 1700 124 8 4 chr10 28717381 28717640 -116871648 - AluY SINE Alu -51 260 1 500 17 0 0 chr10 28717660 28717718 -116871570 - MER41A LTR ERV1 -97 457 400 2184 91 17 3 chr10 28717781 28718078 -116871210 + AluSx SINE Alu 1 301 -11 310 283 53 44 chr10 28718080 28718193 -116871095 + MIR3 SINE MIR 41 154 -54 280 350 29 19 chr10 28718526 28718629 -116870659 + MIR SINE MIR 2 105 -157 180 226 0 0 chr10 28718651 28718682 -116870606 + L2 LINE L2 3264 3294 -19 733 325 77 31 chr10 28718792 28719183 -116870105 - L2 LINE L2 -1 3312 2904 2080 233 113 30 chr10 28719185 28719310 -116869978 - L2 LINE L2 -781 2533 2420 2140 99 27 3 chr10 28719310 28719603 -116869685 - AluSq SINE Alu -13 300 1 2080 233 113 30 chr10 28719603 28720203 -116869085 - L2 LINE L2 -894 2420 1748 242 270 230 11 chr10 28720271 28720445 -116868843 - L2 LINE L2 -1921 1393 1182 345 278 41 0 chr10 28720567 28720664 -116868624 + L3 LINE CR1 1460 1560 -17 1277 133 0 0 chr10 28721067 28721247 -116868041 - AluJ SINE Alu -4 308 129 1671 183 0 13 chr10 28721255 28721556 -116867732 - AluJo SINE Alu -15 297 1 775 169 0 8 chr10 28721605 28721723 -116867565 - AluJ SINE Alu -192 120 4 1590 215 129 22 chr10 28722311 28722799 -116866489 - L1ME3A LINE L1 0 6170 5631 319 200 56 11 chr10 28723667 28723757 -116865531 - L1MC4 LINE L1 -6 8036 7943 1429 175 57 0 chr10 28723772 28724018 -116865270 - AluJb SINE Alu -52 260 1 403 196 125 107 chr10 28724036 28724204 -116865084 - L1MC4 LINE L1 -105 7937 7767 650 151 0 0 chr10 28724204 28724297 -116864991 + AluSx SINE Alu 3 95 -218 1638 99 14 5 chr10 28724314 28724537 -116864751 + AluSx SINE Alu 72 296 -14 626 187 33 172 chr10 28724538 28724870 -116864418 - L1MC4 LINE L1 -267 7775 7490 * 676 216 75 37 chr10 28724869 28725110 -116864178 - L1ME4a LINE L1 -295 5826 5577 427 250 35 81 chr10 28725210 28725382 -116863906 + L1MC4a LINE L1 7294 7457 -351 470 292 100 39 chr10 28725772 28726162 -116863126 - L1MC4 LINE L1 -4 8038 7625 27 29 0 0 chr10 28726379 28726413 -116862875 + AT_rich Low_complexity Low_complexity 1 34 0 859 153 0 0 chr10 28728004 28728135 -116861153 + AluJo SINE Alu 1 131 -181 1950 140 39 0 chr10 28728141 28728426 -116860862 + AluSx SINE Alu 3 298 -14 907 220 23 0 chr10 28728471 28728648 -116860640 + AluJo SINE Alu 118 298 -14 1428 162 165 13 chr10 28728813 28729116 -116860172 + L1MB7 LINE L1 5823 6171 -13 2223 118 0 3 chr10 28730341 28730646 -116858642 - AluSq SINE Alu -7 306 3 1608 179 24 30 chr10 28731585 28731882 -116857406 + AluJo SINE Alu 1 295 -17 569 230 0 0 chr10 28731900 28732000 -116857288 + FRAM SINE Alu 1 100 -76 1134 194 158 26 chr10 28732059 28732363 -116856925 + MER2 DNA MER2_type 1 344 0 2121 106 0 0 chr10 28732615 28732889 -116856399 - AluSx SINE Alu -38 274 1 896 149 0 15 chr10 28733295 28733429 -116855859 - FLAM_C SINE Alu -1 132 1 258 200 12 47 chr10 28733431 28733479 -116855809 + T-rich Low_complexity Low_complexity 1 46 -36 2060 151 3 0 chr10 28733479 28733790 -116855498 - AluSp SINE Alu -1 312 1 258 200 12 47 chr10 28733790 28733826 -116855462 + T-rich Low_complexity Low_complexity 46 82 0 2366 94 0 0 chr10 28734311 28734610 -116854678 + AluSx SINE Alu 1 299 -13 423 195 110 8 chr10 28734704 28734822 -116854466 + Charlie7 DNA MER1_type 2452 2581 -31 791 163 0 37 chr10 28734847 28734982 -116854306 - FLAM_C SINE Alu -3 130 1 2027 110 46 0 chr10 28735096 28735378 -116853910 - AluSx SINE Alu -17 295 1 811 301 106 3 chr10 28735439 28735798 -116853490 - L1ME4a LINE L1 -114 6007 5612 339 188 0 43 chr10 28736165 28736234 -116853054 + AluJo SINE Alu 78 143 -159 2282 73 11 7 chr10 28736234 28736520 -116852768 + AluSx SINE Alu 1 287 -25 2174 109 0 3 chr10 28737073 28737375 -116851913 - AluSc SINE Alu -8 301 1 360 151 15 9 chr10 28737466 28737547 -116851741 - MER41B LTR ERV1 -88 547 388 227 332 161 16 chr10 28737631 28737824 -116851464 - L2 LINE L2 -225 3047 2827 1548 170 4 4 chr10 28737824 28738077 -116851211 + AluSx SINE Alu 1 253 -59 1634 155 0 4 chr10 28738222 28738467 -116850821 + AluSx SINE Alu 11 254 -58 1431 160 115 4 chr10 28738726 28738995 -116850293 - AluJb SINE Alu -13 299 1 1462 105 12 17 chr10 28739269 28739622 -116849666 + L1MA3 LINE L1 5254 5607 -698 2321 88 3 0 chr10 28739622 28739918 -116849370 + AluSp SINE Alu 1 297 -16 1462 105 12 17 chr10 28739918 28740518 -116848770 + L1MA3 LINE L1 5607 6287 -18 626 156 73 9 chr10 28740544 28740653 -116848635 - FLAM_C SINE Alu -17 116 1 37 0 0 0 chr10 28740683 28740720 -116848568 + AT_rich Low_complexity Low_complexity 1 37 0 739 197 0 0 chr10 28740910 28741027 -116848261 + AluJo/FLAM SINE Alu 2 118 -194 2225 133 0 0 chr10 28741027 28741335 -116847953 + AluSx SINE Alu 1 308 -4 22 56 0 0 chr10 28741429 28741465 -116847823 + AT_rich Low_complexity Low_complexity 1 36 0 2195 110 0 13 chr10 28741844 28742012 -116847276 - AluSx SINE Alu -11 301 132 1919 127 4 0 chr10 28742012 28742288 -116847000 - AluSp SINE Alu -5 308 32 2234 101 3 3 chr10 28742288 28742586 -116846702 - AluSx SINE Alu -14 298 1 2195 110 0 13 chr10 28742586 28742716 -116846572 - AluSx SINE Alu -178 134 6 442 318 112 40 chr10 28743563 28743937 -116845351 + L2 LINE L2 255 655 -2659 1105 160 55 10 chr10 28743945 28744145 -116845143 - AluJb SINE Alu -21 291 83 2096 145 7 0 chr10 28744168 28744478 -116844810 + AluJb SINE Alu 1 312 0 2454 93 0 3 chr10 28744611 28744924 -116844364 + AluSq SINE Alu 1 312 -1 684 175 114 0 chr10 28744944 28745058 -116844230 + FLAM_A SINE Alu 1 127 -6 564 114 38 0 chr10 28745110 28745189 -116844099 + AluSg/x SINE Alu 217 298 -14 24 32 0 0 chr10 28745278 28745309 -116843979 + AT_rich Low_complexity Low_complexity 1 31 0 893 102 14 54 chr10 28745311 28745458 -116843830 - L1PB3 LINE L1 -3 6151 6011 1107 143 6 0 chr10 28745967 28746135 -116843153 + AluSx SINE Alu 1 169 -143 2063 139 0 0 chr10 28746299 28746594 -116842694 + AluSx SINE Alu 1 295 -17 1878 179 68 46 chr10 28746681 28747138 -116842150 - MLT1C LTR MaLR 0 467 1 2273 82 3 0 chr10 28747393 28747706 -116841582 - AluSp SINE Alu 0 314 1 243 235 59 0 chr10 28747708 28747776 -116841512 + L2 LINE L2 1872 1943 -1371 233 312 197 45 chr10 28747824 28748039 -116841249 + L2 LINE L2 2138 2319 -995 2412 96 0 0 chr10 28748039 28748341 -116840947 + AluSx SINE Alu 1 302 -10 233 312 197 45 chr10 28748341 28748683 -116840605 + L2 LINE L2 2319 2780 -534 2099 125 6 13 chr10 28749059 28749370 -116839918 - AluSg1 SINE Alu 0 309 1 193 362 142 16 chr10 28749834 28749961 -116839327 + L2 LINE L2 3112 3254 -18 2201 113 0 13 chr10 28750333 28750635 -116838653 + AluSx SINE Alu 1 298 -14 2352 97 0 10 chr10 28751496 28751807 -116837481 + AluY SINE Alu 1 308 -3 2646 163 27 29 chr10 28752342 28752599 -116836689 - MER83 LTR ERV1 0 448 190 2150 110 0 0 chr10 28752599 28752910 -116836378 - AluSx SINE Alu 0 311 1 2646 163 27 29 chr10 28752910 28753100 -116836188 - MER83 LTR ERV1 -258 190 1 2278 95 0 20 chr10 28753321 28753625 -116835663 + AluSq SINE Alu 1 298 -15 2123 91 14 17 chr10 28753877 28754011 -116835277 + AluSg SINE Alu 1 134 -176 2299 101 0 3 chr10 28754011 28754318 -116834970 + AluY SINE Alu 1 306 -5 2123 91 14 17 chr10 28754318 28754479 -116834809 + AluSg SINE Alu 134 295 -15 1666 177 14 0 chr10 28754686 28754968 -116834320 + AluJb SINE Alu 5 290 -22 832 156 8 8 chr10 28755036 28755164 -116834124 - FLAM_C SINE Alu -5 128 1 2011 74 0 19 chr10 28755486 28755773 -116833515 - AluSc SINE Alu 0 308 27 1926 149 19 13 chr10 28755920 28756228 -116833060 - AluJb SINE Alu -2 310 1 989 250 59 34 chr10 28756238 28756562 -116832726 - L2 LINE L2 0 3313 2982 2383 88 0 0 chr10 28756771 28757065 -116832223 - AluSx SINE Alu -6 306 13 2179 92 49 0 chr10 28757572 28757856 -116831432 + AluSx SINE Alu 5 302 -10 999 174 6 0 chr10 28757856 28758017 -116831271 + AluSg/x SINE Alu 134 295 -17 2309 83 3 0 chr10 28758026 28758315 -116830973 + AluSx SINE Alu 2 291 -21 2132 110 0 0 chr10 28759237 28759528 -116829760 + AluSg SINE Alu 1 291 -19 2107 142 0 0 chr10 28759687 28759983 -116829305 + AluSx SINE Alu 1 296 -16 595 221 18 90 chr10 28761126 28761447 -116827841 + MER34B LTR ERV1 5 360 -205 733 83 10 0 chr10 28761447 28761543 -116827745 - AluSg SINE Alu -213 97 1 762 179 0 0 chr10 28761577 28761694 -116827594 + FLAM_C SINE Alu 2 118 -25 26 0 0 27 chr10 28761696 28761708 -116827580 + AT_rich Low_complexity Low_complexity 1 12 -24 2548 21 21 0 chr10 28761708 28761988 -116827300 + L1PA5 LINE L1 5861 6146 -8 26 0 0 27 chr10 28761988 28762012 -116827276 + AT_rich Low_complexity Low_complexity 12 36 0 24 24 0 24 chr10 28762191 28762220 -116827068 + AT_rich Low_complexity Low_complexity 1 30 -11 2190 121 0 0 chr10 28762220 28762510 -116826778 + AluSx SINE Alu 1 290 -22 24 24 0 24 chr10 28762510 28762522 -116826766 + AT_rich Low_complexity Low_complexity 30 41 0 542 323 113 5 chr10 28762919 28763241 -116826047 - L2 LINE L2 -617 2697 2284 241 143 24 0 chr10 28763258 28763300 -116825988 + MLT1F1 LTR MaLR 17 59 -508 2547 156 96 19 chr10 28763300 28763819 -116825469 + L1MC1 LINE L1 5768 6326 -7 1970 132 0 14 chr10 28763819 28764115 -116825173 + AluSq SINE Alu 1 292 -21 1084 174 126 30 chr10 28764132 28764465 -116824823 + L1 LINE L1 3049 3413 -2733 24 32 0 0 chr10 28764501 28764532 -116824756 + AT_rich Low_complexity Low_complexity 1 31 0 310 216 150 65 chr10 28764568 28764721 -116824567 - MLT1K LTR MaLR -302 286 121 2209 89 3 10 chr10 28764907 28765198 -116824090 + AluSg SINE Alu 1 289 -21 417 239 28 0 chr10 28765715 28765824 -116823464 - L1MC4 LINE L1 -5 8037 7926 490 152 168 0 chr10 28765918 28766043 -116823245 - L1ME1 LINE L1 -5 6161 6016 1239 187 85 30 chr10 28766054 28766385 -116822903 - L1ME1 LINE L1 -582 5602 5254 2448 56 3 16 chr10 28766404 28766708 -116822580 - AluY SINE Alu -11 300 1 181 299 0 30 chr10 28766976 28767043 -116822245 - L2 LINE L2 -7 3265 3201 886 149 0 0 chr10 28767200 28767321 -116821967 + FLAM_C SINE Alu 1 121 -12 21 0 0 0 chr10 28767323 28767344 -116821944 + AT_rich Low_complexity Low_complexity 1 21 0 326 156 32 50 chr10 28767425 28767505 -116821783 - LTR41 LTR ERVL 0 523 440 857 174 12 124 chr10 28767516 28767659 -116821629 + AluJo SINE Alu 6 163 -149 2178 92 6 48 chr10 28767659 28767974 -116821314 + AluSx SINE Alu 2 303 -9 2217 119 0 7 chr10 28767984 28768286 -116821002 + AluSx SINE Alu 3 302 -10 857 174 12 124 chr10 28768286 28768373 -116820915 + AluJo SINE Alu 173 220 -92 2391 85 3 0 chr10 28768404 28768698 -116820590 + AluSg SINE Alu 1 295 -15 306 250 176 27 chr10 28769301 28769530 -116819758 + LTR41 LTR ERVL 510 795 0 1547 127 130 16 chr10 28769698 28769951 -116819337 + AluSg SINE Alu 14 295 -15 527 144 29 0 chr10 28770617 28770756 -116818532 + (TA)n Simple_repeat Simple_repeat 2 144 0 2080 134 3 7 chr10 28770873 28771180 -116818108 + AluSx SINE Alu 1 306 -6 1089 228 134 55 chr10 28771532 28772314 -116816974 + L1ME LINE L1 1107 1940 -4706 1787 171 7 0 chr10 28772355 28772681 -116816607 - AluSx SINE Alu 0 328 1 419 208 54 13 chr10 28772690 28772871 -116816417 + L1ME LINE L1 2525 2755 -3931 2431 70 0 16 chr10 28772871 28773185 -116816103 + AluY SINE Alu 1 309 -2 2301 72 10 13 chr10 28773195 28773501 -116815787 + AluY SINE Alu 1 305 -6 25 0 0 0 chr10 28774124 28774149 -116815139 + AT_rich Low_complexity Low_complexity 1 25 0 423 0 0 0 chr10 28774562 28774609 -116814679 + (TG)n Simple_repeat Simple_repeat 2 48 0 1726 104 100 4 chr10 28774815 28775097 -116814191 - AluSq SINE Alu 0 307 1 2398 86 3 0 chr10 28775434 28775737 -116813551 + AluSg SINE Alu 1 304 -6 1972 122 27 20 chr10 28775906 28776201 -116813087 + AluSx SINE Alu 1 297 -15 1283 217 112 0 chr10 28776743 28777001 -116812287 + AluJo SINE Alu 1 287 -15 195 167 0 0 chr10 28777003 28777045 -116812243 + (TATG)n Simple_repeat Simple_repeat 3 44 0 314 333 175 4 chr10 28777091 28777314 -116811974 + L1ME LINE L1 4226 4480 -2164 386 297 126 50 chr10 28777377 28777892 -116811396 + L1ME LINE L1 4603 5156 -1488 674 292 120 47 chr10 28778420 28778886 -116810402 + L1ME LINE L1 5816 6315 -304 795 111 21 175 chr10 28779275 28779511 -116809777 + AluSp SINE Alu 124 330 0 749 130 19 0 chr10 28779571 28779679 -116809609 + FLAM_C SINE Alu 16 125 -18 456 358 121 9 chr10 28780130 28780460 -116808828 + L2 LINE L2 2365 2731 -583 182 417 12 0 chr10 28780824 28780908 -116808380 + L2 LINE L2 3186 3270 -2 1723 205 30 0 chr10 28781606 28781909 -116807379 - AluJb SINE Alu 0 312 1 22 0 0 0 chr10 28782347 28782369 -116806919 + AT_rich Low_complexity Low_complexity 1 22 0 28 0 0 0 chr10 28782390 28782418 -116806870 + AT_rich Low_complexity Low_complexity 1 28 0 226 296 40 19 chr10 28783119 28783262 -116806026 + MER5A DNA MER1_type 1 183 -6 21 0 0 31 chr10 28783351 28783362 -116805926 + AT_rich Low_complexity Low_complexity 1 11 -20 2135 116 7 3 chr10 28783362 28783672 -116805616 - AluY SINE Alu 0 311 1 21 0 0 31 chr10 28783672 28783692 -116805596 + AT_rich Low_complexity Low_complexity 11 31 0 500 17 0 0 chr10 28783693 28783751 -116805537 - MER41A LTR ERV1 -97 457 400 1307 90 6 0 chr10 28783855 28784041 -116805247 + AluSp SINE Alu 118 304 0 2305 70 7 10 chr10 28784068 28784367 -116804921 + AluY SINE Alu 1 298 -13 993 107 75 164 chr10 28785373 28785516 -116803772 + L1MD3 LINE L1 7730 7837 -158 2392 67 0 0 chr10 28785516 28785801 -116803487 + AluY SINE Alu 7 291 -20 993 107 75 164 chr10 28785801 28785938 -116803350 + L1MD3 LINE L1 7837 7985 -10 25 0 0 0 chr10 28786356 28786381 -116802907 + AT_rich Low_complexity Low_complexity 1 25 0 1214 200 55 4 chr10 28787145 28787380 -116801908 + AluJo SINE Alu 46 292 -20 820 179 0 8 chr10 28787862 28787996 -116801292 + AluJo SINE Alu 2 134 -178 1776 236 167 24 chr10 28788180 28788772 -116800516 + LTR41 LTR ERVL 1 677 -96 1535 142 9 9 chr10 28788845 28789097 -116800191 - AluSx SINE Alu 0 312 58 2182 149 43 19 chr10 28789101 28789529 -116799759 + Tigger2 DNA MER2_type 13 2718 0 452 302 54 34 chr10 28789837 28790096 -116799192 + L1ME LINE L1 5519 5786 -335 2024 153 3 10 chr10 28790096 28790409 -116798879 + AluSx SINE Alu 1 311 -1 452 302 54 34 chr10 28790409 28790444 -116798844 + L1ME LINE L1 5786 5819 -302 2101 115 3 28 chr10 28790461 28790782 -116798506 + AluSq SINE Alu 1 313 0 622 155 31 0 chr10 28790782 28790879 -116798409 + AluJo/FRAM SINE Alu 197 296 -16 262 284 43 17 chr10 28790912 28791028 -116798260 - MIR SINE MIR -11 251 133 3783 119 38 35 chr10 28791031 28791589 -116797699 + MER41B LTR ERV1 1 563 -72 2257 97 10 0 chr10 28791589 28791889 -116797399 - AluY SINE Alu -7 304 2 3783 119 38 35 chr10 28791889 28791961 -116797327 + MER41B LTR ERV1 563 633 -2 516 179 1 120 chr10 28791968 28792118 -116797170 + MSTD LTR MaLR 13 145 -251 2601 42 0 7 chr10 28792272 28792579 -116796709 + AluY SINE Alu 5 309 -2 549 324 96 10 chr10 28793513 28793849 -116795439 + L2 LINE L2 2644 3008 -264 1350 73 6 0 chr10 28795231 28795408 -116793880 - AluSq SINE Alu -5 308 131 21 0 0 0 chr10 28795963 28795984 -116793304 + GC_rich Low_complexity Low_complexity 1 21 0 254 297 59 10 chr10 28796550 28796651 -116792637 - MIR SINE MIR -72 136 31 2235 66 0 62 chr10 28796671 28796991 -116792297 - AluY SINE Alu -10 301 2 1841 107 7 65 chr10 28797179 28797488 -116791800 - AluSx SINE Alu -21 291 1 1986 77 110 4 chr10 28797498 28797771 -116791517 - AluSq SINE Alu -11 302 1 31 26 0 0 chr10 28798294 28798332 -116790956 + AT_rich Low_complexity Low_complexity 1 38 0 1372 191 58 7 chr10 28798906 28799183 -116790105 + AluJo SINE Alu 1 291 -21 304 163 0 0 chr10 28799493 28799542 -116789746 - MLT2C2 LTR ERVL 0 464 416 810 193 0 37 chr10 28799585 28799746 -116789542 + AluJo SINE Alu 1 155 -157 1655 130 20 80 chr10 28799790 28800091 -116789197 - AluSx SINE Alu -29 283 1 1429 178 36 46 chr10 28800658 28800961 -116788327 - AluJb SINE Alu -8 304 5 2414 106 0 0 chr10 28801137 28801449 -116787839 + AluSq SINE Alu 1 312 -1 2200 102 3 3 chr10 28801894 28802189 -116787099 + AluSq SINE Alu 1 295 -18 30 0 0 0 chr10 28802196 28802226 -116787062 + AT_rich Low_complexity Low_complexity 1 30 0 430 342 78 22 chr10 28802569 28803016 -116786272 + L1MC/D LINE L1 5301 5772 -2036 2174 113 0 20 chr10 28803049 28803351 -116785937 + AluSx SINE Alu 1 296 -16 351 245 74 64 chr10 28803468 28803581 -116785707 + MER46C DNA MER2_type 1 111 -227 2281 99 3 3 chr10 28803581 28803885 -116785403 - AluSq SINE Alu -9 304 1 351 245 74 64 chr10 28803885 28804014 -116785274 + MER46C DNA MER2_type 111 293 -45 2319 97 0 26 chr10 28804287 28804598 -116784690 - AluY SINE Alu -8 303 1 1037 145 0 41 chr10 28804608 28804780 -116784508 - AluSg/x SINE Alu -18 294 130 1709 170 21 7 chr10 28804816 28805105 -116784183 - AluJo SINE Alu -17 295 3 2166 108 0 0 chr10 28805319 28805606 -116783682 - AluSx SINE Alu -25 287 1 319 193 20 29 chr10 28806213 28806286 -116783002 + AluJ/FLAM SINE Alu 1 57 -245 600 86 0 37 chr10 28806286 28806367 -116782921 - AluSg/x SINE Alu -17 295 218 37 0 0 0 chr10 28806495 28806532 -116782756 + AT_rich Low_complexity Low_complexity 1 37 0 739 197 0 0 chr10 28806722 28806839 -116782449 + AluJo/FLAM SINE Alu 2 118 -194 2241 130 0 0 chr10 28806839 28807147 -116782141 + AluSx SINE Alu 1 308 -4 22 56 0 0 chr10 28807241 28807277 -116782011 + AT_rich Low_complexity Low_complexity 1 36 0 2247 105 0 13 chr10 28807656 28807824 -116781464 - AluSx SINE Alu -11 301 132 1919 127 4 0 chr10 28807824 28808100 -116781188 - AluSp SINE Alu -5 308 32 2236 104 3 3 chr10 28808100 28808398 -116780890 - AluSx SINE Alu -14 298 1 2247 105 0 13 chr10 28808398 28808533 -116780755 - AluSx SINE Alu -178 134 1 2481 57 3 3 chr10 28808822 28809123 -116780165 + AluY SINE Alu 1 301 -10 2419 96 0 0 chr10 28809133 28809445 -116779843 + AluSx SINE Alu 1 312 0 1603 159 36 0 chr10 28809503 28809755 -116779533 + AluJo SINE Alu 13 273 -39 2318 98 0 3 chr10 28810547 28810844 -116778444 - AluSx SINE Alu -16 296 1 1952 147 0 16 chr10 28811101 28811408 -116777880 + AluSx SINE Alu 1 302 -10 35 71 0 0 chr10 28812009 28812079 -116777209 + AT_rich Low_complexity Low_complexity 1 70 0 333 308 173 0 chr10 28812504 28812660 -116776628 - MER5A DNA MER1_type 0 189 7 1084 175 28 5 chr10 28812660 28812877 -116776411 + L1MC/D LINE L1 4523 4744 -1402 577 250 78 0 chr10 28813000 28813192 -116776096 + L1MC/D LINE L1 5574 5780 -2028 965 249 19 83 chr10 28813193 28813554 -116775734 - MER46C DNA MER2_type 0 338 1 1796 185 0 13 chr10 28813713 28814027 -116775261 + AluSx SINE Alu 1 310 -2 2115 137 0 3 chr10 28814637 28814950 -116774338 - AluSx SINE Alu 0 312 1 1747 160 3 32 chr10 28815699 28816012 -116773276 + AluJb SINE Alu 1 304 -8 1843 144 0 47 chr10 28816165 28816485 -116772803 + AluJo SINE Alu 7 311 -1 257 311 9 9 chr10 28816694 28816800 -116772488 + L1MC/D LINE L1 5739 5844 -1964 2278 103 0 0 chr10 28816826 28817118 -116772170 + AluSx SINE Alu 1 292 -20 694 164 0 25 chr10 28817151 28817273 -116772015 - AluSg/x SINE Alu -10 299 181 468 154 0 0 chr10 28817294 28817359 -116771929 - AluS SINE Alu -247 66 2 22 0 0 0 chr10 28817706 28817728 -116771560 + AT_rich Low_complexity Low_complexity 1 22 0 944 158 19 0 chr10 28818227 28818385 -116770903 - L1PA16 LINE L1 -2 6164 6004 336 64 0 0 chr10 28818527 28818574 -116770714 + (CA)n Simple_repeat Simple_repeat 2 48 0 1421 100 28 104 chr10 28818630 28818711 -116770577 - MER30 DNA MER1_type 0 230 144 1981 121 0 57 chr10 28818711 28819042 -116770246 - AluSx SINE Alu 0 312 1 1421 100 28 104 chr10 28819042 28819209 -116770079 - MER30 DNA MER1_type -86 144 1 207 0 0 0 chr10 28819781 28819804 -116769484 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2050 113 3 3 chr10 28819806 28820089 -116769199 - AluSx SINE Alu -29 283 1 400 220 9 46 chr10 28820144 28820253 -116769035 - MER5B DNA MER1_type -68 110 6 2124 112 0 10 chr10 28820371 28820667 -116768621 + AluSg SINE Alu 1 293 -17 351 0 0 0 chr10 28820869 28820908 -116768380 + (TA)n Simple_repeat Simple_repeat 2 40 0 2354 88 0 10 chr10 28820908 28821214 -116768074 - AluSx SINE Alu -8 304 2 375 110 0 18 chr10 28821399 28821654 -116767634 + AluSx SINE Alu 1 298 -4 2238 117 0 0 chr10 28822609 28822907 -116766381 + AluSx SINE Alu 2 299 -13 2138 139 0 0 chr10 28823328 28823630 -116765658 + AluSx SINE Alu 1 302 -10 240 86 29 0 chr10 28824248 28824283 -116765005 + U2 snRNA snRNA 1 36 -152 453 69 17 0 chr10 28824351 28824409 -116764879 - U7 snRNA snRNA -3 60 2 2228 116 7 0 chr10 28824419 28824720 -116764568 - AluSx SINE Alu -9 303 1 27 73 0 0 chr10 28825016 28825071 -116764217 + AT_rich Low_complexity Low_complexity 1 55 0 2344 100 3 0 chr10 28825238 28825539 -116763749 + AluSx SINE Alu 1 302 -10 1478 171 47 7 chr10 28825546 28825821 -116763467 + AluJb SINE Alu 6 291 -21 2361 81 3 13 chr10 28825852 28826160 -116763128 + AluSp SINE Alu 1 305 -8 21 0 0 0 chr10 28826583 28826604 -116762684 + AT_rich Low_complexity Low_complexity 1 21 0 2284 108 0 0 chr10 28826743 28827050 -116762238 + AluSx SINE Alu 1 307 -5 1936 133 7 10 chr10 28827924 28828225 -116761063 + AluJb SINE Alu 1 300 -12 256 269 86 47 chr10 28828254 28828488 -116760800 + L1ME4a LINE L1 5704 5946 -175 2193 110 13 0 chr10 28828699 28828999 -116760289 + AluSx SINE Alu 1 304 -8 2189 113 20 0 chr10 28829715 28830008 -116759280 - AluSq SINE Alu -14 299 1 2063 50 25 109 chr10 28830020 28830370 -116758918 - AluY SINE Alu 0 311 1 2167 105 3 0 chr10 28831009 28831303 -116757985 + AluSp SINE Alu 1 295 -18 427 249 144 22 chr10 28831387 28831631 -116757657 + L1MDa LINE L1 1552 1867 -4730 22 0 0 0 chr10 28831685 28831707 -116757581 + AT_rich Low_complexity Low_complexity 1 22 0 2213 85 0 3 chr10 28831831 28832141 -116757147 - AluSx SINE Alu 0 309 1 297 230 48 26 chr10 28833319 28833407 -116755881 + MIR SINE MIR 30 117 -91 807 142 7 47 chr10 28833680 28833828 -116755460 + FLAM_C SINE Alu 2 143 0 23 0 0 0 chr10 28834805 28834828 -116754460 + AT_rich Low_complexity Low_complexity 1 23 0 282 56 0 0 chr10 28835186 28835222 -116754066 + (CA)n Simple_repeat Simple_repeat 1 36 0 362 297 109 11 chr10 28835648 28835823 -116753465 + MIR SINE MIR 16 207 -55 841 204 0 25 chr10 28837194 28837356 -116751932 + FRAM SINE Alu 1 158 -18 784 118 0 0 chr10 28844297 28844399 -116744889 + AluSp/q SINE Alu 157 258 -55 27 29 0 0 chr10 28844656 28844690 -116744598 + GC_rich Low_complexity Low_complexity 1 34 0 2261 80 35 0 chr10 28845172 28845459 -116743829 + AluSc SINE Alu 1 297 -12 234 91 0 0 chr10 28845932 28845965 -116743323 + (CA)n Simple_repeat Simple_repeat 1 33 0 2032 83 0 0 chr10 28846008 28846261 -116743027 - AluSc SINE Alu -56 253 1 1783 105 0 4 chr10 28846375 28846614 -116742674 - L1PA7 LINE L1 0 6154 5917 5890 64 18 0 chr10 28846615 28847377 -116741911 + L1P LINE L1 3984 4759 -1387 21 89 0 0 chr10 28847575 28847631 -116741657 + AT_rich Low_complexity Low_complexity 1 56 0 23 33 0 0 chr10 28847773 28847803 -116741485 + AT_rich Low_complexity Low_complexity 1 30 0 243 133 0 0 chr10 28847902 28847947 -116741341 - Alu SINE Alu -6 297 253 1849 128 0 54 chr10 28848085 28848381 -116740907 + AluSx SINE Alu 1 280 -32 4491 237 60 91 chr10 28848402 28850125 -116739163 + pTR5 LTR ERV1 769 2438 0 2312 73 7 7 chr10 28852364 28852666 -116736622 - AluSg SINE Alu -8 302 1 1562 249 148 24 chr10 28853242 28853940 -116735348 - MER20B DNA MER1_type 0 784 1 183 172 0 0 chr10 28855480 28855509 -116733779 + MIR SINE MIR 94 122 -86 24 67 0 0 chr10 28855598 28855643 -116733645 + AT_rich Low_complexity Low_complexity 1 45 0 273 163 0 0 chr10 28855732 28855781 -116733507 + (TATATG)n Simple_repeat Simple_repeat 5 53 0 704 165 119 0 chr10 28855782 28855891 -116733397 - FLAM_C SINE Alu -11 122 1 240 167 21 21 chr10 28856072 28856120 -116733168 + L3 LINE CR1 1354 1401 -176 203 161 0 0 chr10 28856313 28856344 -116732944 + (TATATG)n Simple_repeat Simple_repeat 4 34 0 1991 125 7 3 chr10 28856659 28856955 -116732333 - AluSq SINE Alu -16 297 1 243 133 0 0 chr10 28857093 28857138 -116732150 + Alu SINE Alu 253 297 -6 23 33 0 0 chr10 28857236 28857266 -116732022 + AT_rich Low_complexity Low_complexity 1 30 0 1773 105 0 12 chr10 28858056 28858304 -116730984 + AluSg SINE Alu 31 275 -35 351 44 0 0 chr10 28858305 28858350 -116730938 + (TC)n Simple_repeat Simple_repeat 2 46 0 213 216 0 0 chr10 28858350 28858387 -116730901 + (TATG)n Simple_repeat Simple_repeat 3 39 0 1451 208 7 11 chr10 28858613 28858930 -116730358 - AluJo SINE Alu 0 316 1 297 271 37 19 chr10 28860566 28860673 -116728615 + MIR3 SINE MIR 97 205 -3 1697 151 47 7 chr10 28860857 28860977 -116728311 + AluJo SINE Alu 1 115 -197 219 114 0 0 chr10 28860977 28861012 -116728276 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1697 151 47 7 chr10 28861012 28861169 -116728119 + AluJo SINE Alu 115 289 -23 1030 160 0 43 chr10 28861436 28861623 -116727665 - AluSx SINE Alu 0 310 132 264 290 14 0 chr10 28861961 28862030 -116727258 - L2 LINE L2 0 3272 3203 1987 192 58 7 chr10 28862089 28862505 -116726783 - MLT1D LTR MaLR -12 493 57 4919 214 30 22 chr10 28862506 28864322 -116724966 - L1MB4 LINE L1 -91 6089 4289 186 103 0 0 chr10 28864322 28864351 -116724937 + (TG)n Simple_repeat Simple_repeat 2 30 0 4919 214 30 22 chr10 28864351 28864531 -116724757 - L1MB4 LINE L1 -1891 4289 4112 2001 134 0 32 chr10 28864531 28864845 -116724443 - AluSx SINE Alu -8 304 1 4919 214 30 22 chr10 28864845 28864958 -116724330 - L1MB4 LINE L1 -2068 4112 3969 2138 134 0 0 chr10 28864958 28865263 -116724025 - AluSx SINE Alu -7 305 1 6840 230 56 27 chr10 28865547 28868200 -116721088 - L1ME1 LINE L1 -303 6257 3523 5511 161 23 20 chr10 28868323 28870179 -116719109 + L1PA13 LINE L1 4248 6148 -15 604 171 0 0 chr10 28870182 28870270 -116719018 - AluSx SINE Alu -183 130 43 2657 273 44 21 chr10 28870282 28871903 -116717385 - L1ME1 LINE L1 -3114 3426 1517 2059 122 0 42 chr10 28872446 28872758 -116716530 - AluSx SINE Alu -13 299 1 1967 136 11 0 chr10 28873292 28873592 -116715696 - AluSx SINE Alu 0 303 1 182 369 45 18 chr10 28874746 28874857 -116714431 + MIR SINE MIR 21 134 -74 2562 257 47 17 chr10 28875022 28875511 -116713777 - L1ME1 LINE L1 -5016 1524 1051 2106 132 3 0 chr10 28875511 28875807 -116713481 - AluSx SINE Alu -15 297 1 2562 257 47 17 chr10 28875807 28876619 -116712669 - L1ME1 LINE L1 -5489 1051 22 22 0 0 0 chr10 28877340 28877362 -116711926 + AT_rich Low_complexity Low_complexity 1 22 0 246 296 93 81 chr10 28877545 28877792 -116711496 - L3 LINE CR1 -263 1314 1065 277 260 208 13 chr10 28878511 28878665 -116710623 - L2 LINE L2 0 3313 3130 383 246 276 0 chr10 28878960 28879094 -116710194 - MIR SINE MIR -5 257 87 213 250 108 75 chr10 28879145 28879188 -116710100 + MIR SINE MIR 69 109 -153 1957 150 0 4 chr10 28879188 28879468 -116709820 - AluSx SINE Alu -33 279 1 213 250 108 75 chr10 28879468 28879544 -116709744 + MIR SINE MIR 109 192 -70 839 249 68 31 chr10 28879553 28879874 -116709414 - MER46C DNA MER2_type -5 333 1 390 278 87 8 chr10 28879997 28880102 -116709186 + MIR SINE MIR 103 221 -41 2269 95 0 0 chr10 28880102 28880397 -116708891 + AluSg SINE Alu 1 295 -15 390 278 87 8 chr10 28880397 28880417 -116708871 + MIR SINE MIR 221 238 -24 21 0 0 0 chr10 28880448 28880469 -116708819 + AT_rich Low_complexity Low_complexity 1 21 0 813 196 9 85 chr10 28880984 28881208 -116708080 + MER3 DNA MER1_type 3 209 0 1699 158 14 45 chr10 28881327 28881643 -116707645 - AluJo SINE Alu 0 307 1 321 369 89 13 chr10 28882212 28882448 -116706840 + MIR SINE MIR 3 256 -6 500 120 22 0 chr10 28882740 28882832 -116706456 + L1MA7 LINE L1 6196 6289 -2 2386 88 0 7 chr10 28882842 28883147 -116706141 + AluSq SINE Alu 1 303 -10 21 0 0 0 chr10 28883368 28883389 -116705899 + AT_rich Low_complexity Low_complexity 1 21 0 453 204 41 0 chr10 28883727 28883825 -116705463 - MER99 DNA DNA -725 103 2 471 113 0 0 chr10 28884165 28884236 -116705052 + (TCTCC)n Simple_repeat Simple_repeat 3 73 0 536 183 11 0 chr10 28884247 28884340 -116704948 - AluJ/FLAM SINE Alu -215 97 4 619 266 73 66 chr10 28884474 28884733 -116704555 + MIR SINE MIR 2 262 0 1762 107 19 8 chr10 28886656 28886945 -116702343 + AluSc SINE Alu 24 309 0 405 86 0 0 chr10 28887961 28888019 -116701269 + (CA)n Simple_repeat Simple_repeat 2 59 0 10199 33 11 128 chr10 28888668 28890195 -116699093 - SVA Other Other 0 1386 38 279 0 0 0 chr10 28890200 28890231 -116699057 + (GGGAGA)n Simple_repeat Simple_repeat 1 31 0 186 184 40 92 chr10 28890784 28890860 -116698428 - L2 LINE L2 0 3313 3242 207 0 0 0 chr10 28891560 28891583 -116697705 + (CATATA)n Simple_repeat Simple_repeat 2 24 0 680 256 92 22 chr10 28891592 28891909 -116697379 - L1MC4a LINE L1 -1883 5925 5587 41968 40 4 0 chr10 28891962 28898094 -116691194 + L1PA4 LINE L1 7 6162 0 632 189 20 117 chr10 28898103 28898299 -116690989 - MER31-int LTR ERV1 -4122 814 638 285 178 139 40 chr10 28898308 28898409 -116690879 - MIR SINE MIR -34 228 118 22 35 0 0 chr10 28898448 28898477 -116690811 + AT_rich Low_complexity Low_complexity 1 29 0 2483 72 3 0 chr10 28899197 28899501 -116689787 + AluY SINE Alu 1 305 -6 216 0 0 0 chr10 28899927 28899951 -116689337 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 221 224 252 19 chr10 28901028 28901135 -116688153 + MIR SINE MIR 14 145 -117 1908 101 8 0 chr10 28901502 28901760 -116687528 - AluSg SINE Alu -16 294 35 2131 82 4 4 chr10 28901856 28902137 -116687151 - AluY SINE Alu -30 281 1 1864 176 0 0 chr10 28902456 28902758 -116686530 + AluSx SINE Alu 1 302 -10 1062 205 60 3 chr10 28903195 28903497 -116685791 - MER33 DNA MER1_type 0 324 6 2367 67 27 0 chr10 28904318 28904615 -116684673 + AluY SINE Alu 1 305 -6 192 200 0 0 chr10 28904758 28904798 -116684490 + (TA)n Simple_repeat Simple_repeat 1 40 0 776 185 0 0 chr10 28905474 28905609 -116683679 + AluJo SINE Alu 1 135 -177 25 51 0 0 chr10 28905729 28905768 -116683520 + AT_rich Low_complexity Low_complexity 1 39 0 569 202 0 0 chr10 28906219 28906323 -116682965 - U6 snRNA snRNA -2 105 2 2144 96 0 4 chr10 28908022 28908303 -116680985 - AluSc SINE Alu -18 291 12 400 87 54 0 chr10 28908310 28908402 -116680886 + (TA)n Simple_repeat Simple_repeat 2 98 0 508 81 64 23 chr10 28908418 28908591 -116680697 + (TA)n Simple_repeat Simple_repeat 1 180 0 1847 135 38 7 chr10 28908846 28909134 -116680154 + AluSq SINE Alu 7 303 -10 261 335 88 26 chr10 28909168 28909362 -116679926 + MIR SINE MIR 26 231 -31 569 202 0 0 chr10 28911175 28911279 -116678009 + U6 snRNA snRNA 2 105 -2 25 51 0 0 chr10 28911734 28911773 -116677515 + AT_rich Low_complexity Low_complexity 1 39 0 776 185 0 0 chr10 28911893 28912028 -116677260 - AluJo SINE Alu -177 135 1 192 200 0 0 chr10 28912704 28912744 -116676544 + (TA)n Simple_repeat Simple_repeat 1 40 0 2192 84 3 7 chr10 28912886 28913172 -116676116 - AluSx SINE Alu -5 307 23 467 331 76 18 chr10 28913277 28913606 -116675682 - L1M4 LINE L1 -3679 2467 2120 520 183 30 179 chr10 28914888 28915123 -116674165 - L2 LINE L2 -1 3312 3113 836 195 6 24 chr10 28915123 28915287 -116674001 - AluJo SINE Alu -151 161 1 1705 158 39 11 chr10 28915297 28915582 -116673706 - AluJb SINE Alu -19 293 1 204 209 31 194 chr10 28917061 28917190 -116672098 - MIR SINE MIR -87 175 68 2037 146 0 19 chr10 28917275 28917584 -116671704 + AluSx SINE Alu 1 303 -9 1665 143 18 35 chr10 28918044 28918330 -116670958 + AluJo SINE Alu 1 281 -31 317 296 131 30 chr10 28919233 28919528 -116669760 - L1 LINE L1 -1315 4831 4502 25 31 0 0 chr10 28920002 28920034 -116669254 + AT_rich Low_complexity Low_complexity 1 32 0 2152 104 0 16 chr10 28920965 28921274 -116668014 - AluY SINE Alu -7 304 1 803 219 0 24 chr10 28921291 28921499 -116667789 + FRAM SINE Alu 1 196 0 1740 185 30 0 chr10 28922017 28922319 -116666969 + AluJb SINE Alu 1 311 -1 27 62 0 0 chr10 28922326 28922374 -116666914 + AT_rich Low_complexity Low_complexity 1 48 0 196 192 137 0 chr10 28922660 28922733 -116666555 + MIR SINE MIR 131 213 -49 5614 112 16 11 chr10 28922890 28922994 -116666294 - L1PA11 LINE L1 -2 6172 6070 414 0 0 0 chr10 28922994 28923040 -116666248 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 1940 132 0 24 chr10 28923040 28923327 -116665961 - AluSx SINE Alu -28 284 5 5614 112 16 11 chr10 28923327 28924342 -116664946 - L1PA11 LINE L1 -103 6071 5037 213 327 0 0 chr10 28924342 28924394 -116664894 + MIR3 SINE MIR 115 166 -42 250 354 72 11 chr10 28925153 28925334 -116663954 + L2 LINE L2 2181 2372 -942 23 0 0 0 chr10 28925542 28925565 -116663723 + AT_rich Low_complexity Low_complexity 1 23 0 2257 86 3 3 chr10 28925859 28926151 -116663137 - AluY SINE Alu -14 297 6 727 251 76 28 chr10 28926205 28926416 -116662872 + MER58A DNA MER1_type 4 224 0 237 313 25 0 chr10 28926495 28926575 -116662713 + MLT1L LTR MaLR 1 82 -533 454 294 95 19 chr10 28926606 28926817 -116662471 + MLT1L LTR MaLR 144 370 -245 1982 122 41 3 chr10 28926843 28927137 -116662151 + AluSg SINE Alu 1 305 -5 1775 138 18 4 chr10 28927748 28928057 -116661231 - AluSx SINE Alu 0 315 3 22 56 0 0 chr10 28928185 28928221 -116661067 + AT_rich Low_complexity Low_complexity 1 36 0 21 36 0 0 chr10 28928598 28928626 -116660662 + AT_rich Low_complexity Low_complexity 1 28 0 1920 168 43 47 chr10 28929052 28929492 -116659796 + Tigger2 DNA MER2_type 1 2718 0 401 109 0 0 chr10 28929543 28929598 -116659690 + FLAM SINE Alu 67 121 -12 357 43 0 0 chr10 28929602 28929649 -116659639 + (CATA)n Simple_repeat Simple_repeat 2 48 0 41 21 0 0 chr10 28929764 28929812 -116659476 + AT_rich Low_complexity Low_complexity 1 48 0 220 244 0 0 chr10 28930081 28930126 -116659162 + (TA)n Simple_repeat Simple_repeat 1 45 0 189 328 109 0 chr10 28930602 28930721 -116658567 + MIR SINE MIR 90 221 -41 820 176 0 0 chr10 28930795 28930931 -116658357 + AluJo SINE Alu 1 136 -176 25 75 0 0 chr10 28931067 28931120 -116658168 + AT_rich Low_complexity Low_complexity 1 53 0 578 200 0 0 chr10 28931558 28931663 -116657625 - U6 snRNA snRNA -2 105 1 754 226 10 29 chr10 28933500 28933708 -116655580 + MSTB2 LTR MaLR 248 451 -6 2626 162 23 2 chr10 28933708 28934190 -116655098 + L1MC1 LINE L1 5842 6333 0 660 265 103 36 chr10 28934193 28934746 -116654542 + L1MEd LINE L1 947 1579 -4731 231 61 0 0 chr10 28934778 28934811 -116654477 + (TG)n Simple_repeat Simple_repeat 2 34 0 662 208 0 8 chr10 28935099 28935224 -116654064 + FLAM_C SINE Alu 1 124 -19 868 38 19 0 chr10 28935491 28935596 -116653692 - AluY SINE Alu -11 300 194 617 350 85 27 chr10 28935600 28935801 -116653487 - L1M4 LINE L1 -3353 2793 2605 2065 94 10 7 chr10 28935801 28936089 -116653199 - AluSx SINE Alu -1 311 23 617 350 85 27 chr10 28936089 28936524 -116652764 - L1M4 LINE L1 -3541 2605 2120 319 318 29 69 chr10 28936931 28937104 -116652184 - HAL1 LINE L1 -737 1770 1605 460 177 28 222 chr10 28937807 28938055 -116651233 - L2 LINE L2 -1 3312 3113 844 189 6 24 chr10 28938055 28938219 -116651069 - AluJo SINE Alu -151 161 1 1693 158 39 11 chr10 28938229 28938514 -116650774 - AluJb SINE Alu -19 293 1 207 209 31 194 chr10 28939993 28940122 -116649166 - MIR SINE MIR -87 175 68 2008 146 0 19 chr10 28940207 28940516 -116648772 + AluSx SINE Alu 1 303 -9 1659 143 18 35 chr10 28940976 28941262 -116648026 + AluJo SINE Alu 1 281 -31 307 314 171 43 chr10 28942165 28942445 -116646843 - L1 LINE L1 -1315 4831 4516 25 31 0 0 chr10 28942933 28942965 -116646323 + AT_rich Low_complexity Low_complexity 1 32 0 2146 104 0 16 chr10 28943896 28944205 -116645083 - AluY SINE Alu -7 304 1 801 219 0 24 chr10 28944222 28944433 -116644855 + FRAM SINE Alu 1 199 0 1730 178 31 0 chr10 28944951 28945243 -116644045 + AluJb SINE Alu 1 301 -11 27 62 0 0 chr10 28945260 28945308 -116643980 + AT_rich Low_complexity Low_complexity 1 48 0 196 192 137 0 chr10 28945594 28945667 -116643621 + MIR SINE MIR 131 213 -49 5645 111 16 11 chr10 28945824 28945928 -116643360 - L1PA11 LINE L1 -2 6172 6070 486 0 0 0 chr10 28945928 28945982 -116643306 + (TTTA)n Simple_repeat Simple_repeat 2 55 0 1952 129 0 24 chr10 28945982 28946269 -116643019 - AluSx SINE Alu -28 284 5 5645 111 16 11 chr10 28946269 28947284 -116642004 - L1PA11 LINE L1 -103 6071 5037 204 346 0 0 chr10 28947284 28947336 -116641952 + MIR3 SINE MIR 115 166 -42 250 354 72 11 chr10 28948096 28948277 -116641011 + L2 LINE L2 2181 2372 -942 23 0 0 0 chr10 28948485 28948508 -116640780 + AT_rich Low_complexity Low_complexity 1 23 0 2242 89 3 3 chr10 28948800 28949092 -116640196 - AluY SINE Alu -14 297 6 727 251 76 28 chr10 28949146 28949357 -116639931 + MER58A DNA MER1_type 4 224 0 237 313 25 0 chr10 28949436 28949516 -116639772 + MLT1L LTR MaLR 1 82 -533 439 299 95 19 chr10 28949547 28949758 -116639530 + MLT1L LTR MaLR 144 370 -245 1982 122 41 3 chr10 28949784 28950078 -116639210 + AluSg SINE Alu 1 305 -5 1775 138 18 4 chr10 28950689 28950998 -116638290 - AluSx SINE Alu 0 315 3 22 56 0 0 chr10 28951126 28951162 -116638126 + AT_rich Low_complexity Low_complexity 1 36 0 21 36 0 0 chr10 28951539 28951567 -116637721 + AT_rich Low_complexity Low_complexity 1 28 0 1920 168 43 47 chr10 28951993 28952433 -116636855 + Tigger2 DNA MER2_type 1 2718 0 401 109 0 0 chr10 28952484 28952539 -116636749 + FLAM SINE Alu 67 121 -12 360 59 0 0 chr10 28952543 28952594 -116636694 + (CATA)n Simple_repeat Simple_repeat 2 52 0 41 21 0 0 chr10 28952709 28952757 -116636531 + AT_rich Low_complexity Low_complexity 1 48 0 220 244 0 0 chr10 28953026 28953071 -116636217 + (TA)n Simple_repeat Simple_repeat 1 45 0 189 328 109 0 chr10 28953547 28953666 -116635622 + MIR SINE MIR 90 221 -41 820 176 0 0 chr10 28953740 28953876 -116635412 + AluJo SINE Alu 1 136 -176 25 75 0 0 chr10 28954012 28954065 -116635223 + AT_rich Low_complexity Low_complexity 1 53 0 578 200 0 0 chr10 28954503 28954608 -116634680 - U6 snRNA snRNA -2 105 1 2231 114 0 3 chr10 28956630 28956937 -116632351 - AluSq SINE Alu -7 306 1 2161 136 0 0 chr10 28957189 28957490 -116631798 - AluSx SINE Alu -10 302 2 207 244 93 35 chr10 28958176 28958262 -116631026 + L2 LINE L2 3175 3265 -48 22 70 0 0 chr10 28959174 28959217 -116630071 + AT_rich Low_complexity Low_complexity 1 43 0 284 321 19 0 chr10 28959272 28959378 -116629910 - MER102b DNA MER1_type -1 340 233 684 251 101 64 chr10 28960430 28960686 -116628602 + MIR SINE MIR 2 261 -1 457 272 11 33 chr10 28960778 28960962 -116628326 + MER104 DNA MER2_type 1 180 0 23 68 0 0 chr10 28961766 28961810 -116627478 + AT_rich Low_complexity Low_complexity 1 44 0 302 337 79 28 chr10 28962212 28962390 -116626898 - L1ME LINE L1 -444 5677 5491 1774 251 62 21 chr10 28962825 28963530 -116625758 - L1ME LINE L1 -941 5205 4472 1226 146 32 4 chr10 28963921 28964156 -116625132 - L1M4 LINE L1 -441 5733 5490 2289 91 6 15 chr10 28965097 28965438 -116623850 - L1PA12 LINE L1 -1 6167 5830 27 29 0 0 chr10 28965600 28965634 -116623654 + AT_rich Low_complexity Low_complexity 1 34 0 1035 93 35 0 chr10 28966201 28966373 -116622915 + CT-rich Low_complexity Low_complexity 3 180 0 2220 118 0 0 chr10 28967138 28967615 -116621673 - AluSx SINE Alu 0 477 1 256 298 10 10 chr10 28967731 28967835 -116621453 - MER113 DNA MER1_type? -313 208 105 1130 145 22 57 chr10 28970679 28970697 -116618591 - LTR49-int LTR ERV1 -4741 1590 1573 5225 110 18 5 chr10 28970697 28971512 -116617776 - L1MA1 LINE L1 0 6302 5477 1130 145 22 57 chr10 28971512 28971549 -116617739 - LTR49-int LTR ERV1 -4758 1573 1536 2007 136 3 3 chr10 28971549 28971844 -116617444 - AluSg SINE Alu -15 295 1 1130 145 22 57 chr10 28971844 28972014 -116617274 - LTR49-int LTR ERV1 -4795 1536 1372 5093 176 39 27 chr10 28972109 28972138 -116617150 - LTR49-int LTR ERV1 -4933 1398 1371 1032 187 10 5 chr10 28972138 28972341 -116616947 + L1PA16 LINE L1 5959 6162 -4 5093 176 39 27 chr10 28972341 28973426 -116615862 - LTR49-int LTR ERV1 -4960 1371 361 1885 177 42 10 chr10 28973427 28973843 -116615445 - LTR49-int LTR ERV1 -4615 1331 1 1460 208 72 11 chr10 28973847 28974208 -116615080 - LTR49 LTR ERV1 -2 593 211 2883 62 0 0 chr10 28974658 28974999 -116614289 - L1PA7 LINE L1 -13 6141 5801 28 29 0 0 chr10 28975240 28975275 -116614013 + AT_rich Low_complexity Low_complexity 1 35 0 317 196 0 28 chr10 28975354 28975461 -116613827 + (CA)n Simple_repeat Simple_repeat 1 104 0 252 184 0 0 chr10 28975496 28975545 -116613743 + (CA)n Simple_repeat Simple_repeat 2 50 0 282 143 0 0 chr10 28976807 28976849 -116612439 - MER41-int LTR ERV1 -4679 1267 1226 253 252 29 0 chr10 28977015 28977118 -116612170 + (TA)n Simple_repeat Simple_repeat 1 106 0 226 246 0 0 chr10 28977887 28977944 -116611344 + (TA)n Simple_repeat Simple_repeat 2 58 0 441 66 0 0 chr10 28978008 28978069 -116611219 + (TCTA)n Simple_repeat Simple_repeat 3 63 0 308 311 8 0 chr10 28978070 28978202 -116611086 + (TA)n Simple_repeat Simple_repeat 2 134 0 1791 109 4 15 chr10 28978805 28979071 -116610217 + AluSx SINE Alu 41 303 -9 237 230 0 0 chr10 28979881 28979955 -116609333 + (TA)n Simple_repeat Simple_repeat 1 74 0 195 42 0 0 chr10 28979980 28980004 -116609284 + (CA)n Simple_repeat Simple_repeat 1 24 0 189 74 0 0 chr10 28980192 28980219 -116609069 + (TATG)n Simple_repeat Simple_repeat 4 30 0 198 156 0 0 chr10 28980466 28980511 -116608777 + (TA)n Simple_repeat Simple_repeat 1 45 0 1067 283 46 38 chr10 28981017 28981515 -116607773 + MLT1J LTR MaLR 1 502 -9 1215 209 35 4 chr10 28982478 28982732 -116606556 - MER31B LTR ERV1 -203 263 2 624 160 10 0 chr10 28982835 28982935 -116606353 - MLT1E1 LTR MaLR -31 623 523 25 0 0 0 chr10 28983339 28983364 -116605924 + AT_rich Low_complexity Low_complexity 1 25 0 2300 169 23 21 chr10 28984420 28984851 -116604437 - L1MB7 LINE L1 -67 6117 5686 1237 207 114 4 chr10 28986848 28987119 -116602169 - AluJb SINE Alu 0 302 2 1837 124 58 7 chr10 28987133 28987407 -116601881 - AluSg1 SINE Alu -21 288 1 223 354 0 0 chr10 28987479 28987558 -116601730 + CT-rich Low_complexity Low_complexity 3 81 0 26 30 0 0 chr10 28987703 28987736 -116601552 + AT_rich Low_complexity Low_complexity 1 33 0 25 31 0 0 chr10 28987897 28987929 -116601359 + AT_rich Low_complexity Low_complexity 1 32 0 2178 121 3 6 chr10 28987929 28988242 -116601046 - AluSx SINE Alu 0 312 1 192 77 0 0 chr10 28988586 28988612 -116600676 + (TTTTC)n Simple_repeat Simple_repeat 4 29 0 808 187 0 0 chr10 28988886 28989009 -116600279 + FLAM_C SINE Alu 2 124 -19 1530 180 10 20 chr10 28989024 28989318 -116599970 + AluJo SINE Alu 1 291 -21 387 291 34 29 chr10 28990159 28990334 -116598954 - MLT1K LTR MaLR -23 565 390 251 342 52 19 chr10 28990526 28990681 -116598607 - MLT1K LTR MaLR -382 206 47 2167 125 50 36 chr10 28990759 28991118 -116598170 + THE1B LTR MaLR 1 364 0 2433 76 0 0 chr10 28992299 28992589 -116596699 - AluSc SINE Alu -19 290 1 931 67 0 8 chr10 28992589 28992709 -116596579 - AluSx SINE Alu 0 310 192 839 85 0 0 chr10 28992713 28992819 -116596469 - AluSx SINE Alu -174 138 33 1738 156 17 10 chr10 28993090 28993378 -116595910 + AluJb SINE Alu 5 294 -18 1976 129 50 0 chr10 28993652 28993932 -116595356 - AluSx SINE Alu -18 294 1 1172 216 6 3 chr10 28994197 28994229 -116595059 + L1MB1 LINE L1 5921 5951 -238 2090 121 0 0 chr10 28994229 28994538 -116594750 + AluSx SINE Alu 1 309 0 1172 216 6 3 chr10 28994538 28994749 -116594539 + L1MB1 LINE L1 5951 6155 -34 998 164 0 62 chr10 28995754 28995931 -116593357 - FRAM SINE Alu 0 166 1 2133 109 3 7 chr10 28996997 28997291 -116591997 - AluSc SINE Alu -14 295 3 802 161 0 86 chr10 28997732 28997906 -116591382 + L1MA10 LINE L1 6137 6295 -39 2184 114 7 0 chr10 28997924 28998223 -116591065 - AluSx SINE Alu -11 301 1 5588 118 30 11 chr10 28998229 28999090 -116590198 - L1PA15 LINE L1 0 6165 5288 2541 126 19 0 chr10 28999090 28999462 -116589826 - L1PA16 LINE L1 -8 6158 5780 233 188 0 0 chr10 28999462 28999505 -116589783 + L1MA10 LINE L1 6282 6324 -10 225 0 0 0 chr10 28999547 28999572 -116589716 + (A)n Simple_repeat Simple_repeat 1 25 0 263 250 15 0 chr10 29001488 29001556 -116587732 + (TG)n Simple_repeat Simple_repeat 2 70 0 1595 111 4 8 chr10 29002105 29002391 -116586897 - AluSq SINE Alu 0 313 77 477 248 14 86 chr10 29003250 29003460 -116585828 + L2 LINE L2 3119 3313 0 2352 122 73 20 chr10 29004075 29004419 -116584869 + THE1B LTR MaLR 1 362 -2 1062 280 49 107 chr10 29005037 29005126 -116584162 + L1MEc LINE L1 20 113 -6283 1867 129 96 0 chr10 29005126 29005406 -116583882 + AluJb SINE Alu 1 307 -5 1062 280 49 107 chr10 29005406 29006231 -116583057 + L1MEc LINE L1 113 881 -5515 1568 238 70 12 chr10 29006235 29006634 -116582654 + MLT1F LTR MaLR 7 428 -114 1257 90 7 0 chr10 29006638 29006793 -116582495 + AluSx SINE Alu 1 156 -156 2108 89 0 38 chr10 29006794 29007085 -116582203 + AluSx SINE Alu 21 300 -12 623 166 182 53 chr10 29007326 29007573 -116581715 + L1MC5 LINE L1 7319 7597 -364 4207 149 23 17 chr10 29007584 29008288 -116581000 - L1MC1 LINE L1 0 6333 5626 823 363 20 25 chr10 29008552 29008995 -116580293 - L1M3a LINE L1 -5503 452 12 3486 152 90 4 chr10 29009001 29010093 -116579195 - L1MCa LINE L1 -4166 2478 1193 2347 174 4 123 chr10 29010095 29010631 -116578657 - MER70A LTR ERVL 0 472 1 15761 150 26 40 chr10 29010654 29011946 -116577342 - MER70A-int LTR ERVL -10 5013 3705 2603 101 28 17 chr10 29011946 29012303 -116576985 + THE1B LTR MaLR 1 361 -3 15761 150 26 40 chr10 29012303 29013809 -116575479 - MER70A-int LTR ERVL -1318 3705 2252 619 168 10 0 chr10 29013801 29013902 -116575386 - MER70-int LTR ERVL -1678 3345 3244 * 665 280 86 106 chr10 29013936 29014055 -116575233 - L1MCa LINE L1 -5813 729 609 1808 119 8 0 chr10 29014055 29014306 -116574982 + AluSx SINE Alu 57 309 -3 665 280 86 106 chr10 29014306 29014662 -116574626 - L1MCa LINE L1 -5933 609 272 2219 79 7 20 chr10 29014662 29014965 -116574323 - AluSx SINE Alu -13 299 1 665 280 86 106 chr10 29014965 29015232 -116574056 - L1MCa LINE L1 -6270 272 1 1848 140 13 23 chr10 29015588 29015896 -116573392 + AluJo SINE Alu 6 310 -2 1143 244 88 34 chr10 29015933 29016433 -116572855 + L1ME4a LINE L1 4696 5222 -924 31 68 0 0 chr10 29016630 29016689 -116572599 + AT_rich Low_complexity Low_complexity 1 59 0 1812 116 8 4 chr10 29016736 29016994 -116572294 - AluSx SINE Alu -14 298 40 195 42 0 0 chr10 29018605 29018629 -116570659 + (A)n Simple_repeat Simple_repeat 1 24 0 729 191 0 107 chr10 29019462 29019630 -116569658 - Tigger3(Golem) DNA MER2_type -2876 153 4 377 287 135 33 chr10 29019641 29020003 -116569285 + L1ME4a LINE L1 5384 5782 -339 356 243 39 88 chr10 29020069 29020250 -116569038 + L1ME4a LINE L1 5923 6094 -27 400 157 0 60 chr10 29020488 29020571 -116568717 - Tigger3b DNA MER2_type -380 852 775 203 55 109 55 chr10 29020575 29020630 -116568658 + (TTAAA)n Simple_repeat Simple_repeat 3 60 0 1038 78 30 104 chr10 29020634 29020852 -116568436 - Tigger3b DNA MER2_type -2241 788 592 2361 68 0 10 chr10 29020852 29021179 -116568109 + AluY SINE Alu 1 311 0 1038 78 30 104 chr10 29021179 29021229 -116568059 - Tigger3b DNA MER2_type -2437 592 540 1185 128 11 16 chr10 29021229 29021416 -116567872 + AluSg/x SINE Alu 122 307 -5 2039 119 92 0 chr10 29021417 29021753 -116567535 - Tigger3b DNA MER2_type -703 528 162 * 3796 135 25 8 chr10 29021751 29022364 -116566924 + Tigger3b DNA MER2_type 609 1231 0 244 0 0 0 chr10 29023852 29023879 -116565409 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2098 95 29 41 chr10 29023879 29024194 -116565094 - AluSx SINE Alu 0 338 1 371 233 12 12 chr10 29024420 29024506 -116564782 + Tigger7 DNA MER2_type 2401 2486 -1 2386 85 0 0 chr10 29024820 29025115 -116564173 + AluSx SINE Alu 1 295 -17 385 324 70 14 chr10 29026053 29026195 -116563093 - MER5B DNA MER1_type -5 173 24 385 289 51 51 chr10 29026661 29026817 -116562471 + L1MB4 LINE L1 5 160 -6382 1385 77 0 0 chr10 29027024 29027194 -116562094 + AluY SINE Alu 129 298 -13 1841 166 3 17 chr10 29027241 29027543 -116561745 + AluJo SINE Alu 11 308 -4 7624 231 49 15 chr10 29027546 29028004 -116561284 + L1MB4 LINE L1 2551 2992 -3652 2151 167 0 0 chr10 29028004 29028316 -116560972 + AluSx SINE Alu 1 312 0 7624 231 49 15 chr10 29028316 29028863 -116560425 + L1MB4 LINE L1 2992 3519 -3125 1502 226 80 0 chr10 29028863 29029199 -116560089 - MLT1A1 LTR MaLR 0 365 3 7624 231 49 15 chr10 29029199 29030772 -116558516 + L1MB4 LINE L1 3519 5218 -1426 1382 189 37 40 chr10 29030773 29031153 -116558135 + L1MB4 LINE L1 6297 6675 -3 1404 174 0 0 chr10 29031624 29031843 -116557445 - AluJb SINE Alu -93 219 1 716 303 65 3 chr10 29034385 29034722 -116554566 - L1MC4a LINE L1 -1961 5847 5490 1187 175 68 115 chr10 29035051 29035434 -116553854 + MLT1A1 LTR MaLR 1 365 0 23 0 0 0 chr10 29035446 29035469 -116553819 + AT_rich Low_complexity Low_complexity 1 23 0 460 314 135 16 chr10 29035604 29035923 -116553365 + MLT1J2 LTR MaLR 65 421 -29 2187 124 0 3 chr10 29036473 29036772 -116552516 + AluSx SINE Alu 1 298 -14 976 238 75 14 chr10 29036946 29037181 -116552107 - MER114 LTR ERV -5 643 424 1832 156 11 0 chr10 29037181 29037463 -116551825 + AluSq SINE Alu 1 285 -28 976 238 75 14 chr10 29037463 29037656 -116551632 - MER114 LTR ERV -224 424 189 41235 47 5 1 chr10 29037665 29043785 -116545503 + L1PA4 LINE L1 11 6155 0 1417 207 12 61 chr10 29043798 29044208 -116545080 + MLT2C1 LTR ERVL 1 390 -7 249 57 0 0 chr10 29044209 29044244 -116545044 + (TA)n Simple_repeat Simple_repeat 2 36 0 5687 246 50 20 chr10 29044265 29046398 -116542890 + ERVL-C1-C1 LTR ERVL 25 2292 -3472 12893 186 66 24 chr10 29046400 29046754 -116542534 + ERVL-C1-C1 LTR ERVL 2465 2803 -2961 774 164 0 16 chr10 29046754 29046882 -116542406 + AluJo/FLAM SINE Alu 1 126 -176 1974 125 7 10 chr10 29046885 29047182 -116542106 + AluSx SINE Alu 1 296 -16 12893 186 66 24 chr10 29047182 29047380 -116541908 + ERVL-C1-C1 LTR ERVL 2804 2992 -2772 273 29 0 0 chr10 29047380 29047414 -116541874 + (TTG)n Simple_repeat Simple_repeat 1 34 0 2098 113 7 0 chr10 29047418 29047700 -116541588 - AluSp SINE Alu -29 284 1 12893 186 66 24 chr10 29047700 29049767 -116539521 + ERVL-C1-C1 LTR ERVL 2994 5222 -542 1232 86 48 32 chr10 29049767 29049954 -116539334 + MER30B DNA MER1_type 1 190 0 12893 186 66 24 chr10 29049954 29050137 -116539151 + ERVL-C1-C1 LTR ERVL 5222 5396 -368 550 239 58 0 chr10 29050176 29050331 -116538957 + ERVL-C1-C1 LTR ERVL 5522 5685 -79 9274 29 8 1 chr10 29050337 29051533 -116537755 + L1P LINE L1 2575 3778 -2368 415 110 0 14 chr10 29051546 29051619 -116537669 + ERVL-C1-C1 LTR ERVL 5686 5757 -7 1468 149 13 112 chr10 29051629 29052012 -116537276 + MLT2C1 LTR ERVL 5 349 -48 186 133 0 0 chr10 29052013 29052043 -116537245 + (TCCC)n Simple_repeat Simple_repeat 3 32 0 372 22 0 0 chr10 29052047 29052092 -116537196 + (TG)n Simple_repeat Simple_repeat 2 46 0 376 246 62 15 chr10 29052151 29052346 -116536942 - MER114 LTR ERV -444 204 1 499 228 36 55 chr10 29052426 29052844 -116536444 + L1ME LINE L1 1260 1668 -4716 2995 261 50 16 chr10 29052854 29054087 -116535201 + L1ME LINE L1 3126 4399 -1983 2347 264 63 22 chr10 29054088 29055044 -116534244 + L1ME LINE L1 4455 5457 -925 2140 73 4 0 chr10 29055044 29055303 -116533985 - AluY SINE Alu -17 294 35 2347 264 63 22 chr10 29055303 29055365 -116533923 + L1ME LINE L1 5457 5515 -867 1265 134 40 102 chr10 29055388 29055663 -116533625 + AluJo SINE Alu 39 296 -16 600 206 111 10 chr10 29055666 29055865 -116533423 + L1ME LINE L1 5538 5756 -642 4840 200 62 26 chr10 29055896 29056381 -116532907 + MER45R DNA AcHobo 52 518 -1063 2288 94 7 0 chr10 29056381 29056679 -116532609 + AluSx SINE Alu 1 300 -12 4840 200 62 26 chr10 29056679 29057439 -116531849 + MER45R DNA AcHobo 518 1341 -240 779 193 75 53 chr10 29057604 29057721 -116531567 + L1M4 LINE L1 4143 4256 -1890 195 42 0 0 chr10 29057721 29057745 -116531543 + (CA)n Simple_repeat Simple_repeat 1 24 0 779 193 75 53 chr10 29057745 29057855 -116531433 + L1M4 LINE L1 4256 4375 -1771 227 266 19 39 chr10 29057854 29058008 -116531280 + L1M4 LINE L1 2282 2432 -3714 * 277 232 43 0 chr10 29059067 29059136 -116530152 + L2 LINE L2 3242 3313 0 612 233 16 21 chr10 29059272 29059465 -116529823 - HAL1b LINE L1 -551 797 606 365 238 48 60 chr10 29059547 29059715 -116529573 - HAL1b LINE L1 -872 476 311 315 313 26 26 chr10 29059840 29059955 -116529333 - HAL1b LINE L1 -1163 185 71 1296 157 18 44 chr10 29060289 29060518 -116528770 + AluJo SINE Alu 21 243 -69 537 281 76 25 chr10 29060556 29060794 -116528494 + HAL1 LINE L1 273 522 -1985 211 247 26 0 chr10 29060842 29060919 -116528369 + (TTA)n Simple_repeat Simple_repeat 1 79 0 684 133 0 0 chr10 29060933 29061031 -116528257 - AluJ/FLAM SINE Alu -214 98 1 209 56 0 28 chr10 29061244 29061280 -116528008 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 1475 182 6 20 chr10 29061286 29061392 -116527896 + L1MA4 LINE L1 5963 6069 -231 1240 152 190 8 chr10 29061392 29061655 -116527633 + AluYa5 SINE Alu 1 311 0 1475 182 6 20 chr10 29061655 29061889 -116527399 + L1MA4 LINE L1 6069 6298 -2 332 329 13 58 chr10 29062031 29062186 -116527102 - HAL1 LINE L1 -891 1616 1469 303 242 0 55 chr10 29062178 29062269 -116527019 - L1MC4 LINE L1 -1343 6699 6614 * 702 98 17 75 chr10 29062279 29062453 -116526835 + (TATATG)n Simple_repeat Simple_repeat 5 168 0 311 239 57 34 chr10 29062457 29062545 -116526743 + L1MC4 LINE L1 6614 6703 -1339 291 170 18 74 chr10 29062558 29063043 -116526245 + (CATA)n Simple_repeat Simple_repeat 1 457 0 383 231 61 0 chr10 29063047 29063194 -116526094 + (TA)n Simple_repeat Simple_repeat 2 157 0 701 139 98 0 chr10 29063225 29063347 -116525941 - AluSq/x SINE Alu -178 134 1 2263 94 40 0 chr10 29063391 29063690 -116525598 + AluSq SINE Alu 1 311 -2 894 177 26 151 chr10 29063933 29063992 -116525296 - MLT2B3 LTR ERVL -8 546 481 2068 116 36 13 chr10 29063992 29064294 -116524994 + AluSx SINE Alu 1 309 -3 894 177 26 151 chr10 29064294 29064545 -116524743 - MLT2B3 LTR ERVL -73 481 275 363 44 0 0 chr10 29065747 29065792 -116523496 + (TTCC)n Simple_repeat Simple_repeat 2 46 0 582 163 12 25 chr10 29065870 29066030 -116523258 + CT-rich Low_complexity Low_complexity 4 161 0 912 174 12 8 chr10 29066136 29066384 -116522904 + CT-rich Low_complexity Low_complexity 1 249 0 1457 204 19 41 chr10 29066390 29066709 -116522579 - AluJo SINE Alu 0 312 1 192 313 75 62 chr10 29067631 29067711 -116521577 + L2 LINE L2 3138 3218 -54 852 152 0 41 chr10 29067871 29068016 -116521272 + FLAM_C SINE Alu 1 139 -4 537 350 62 0 chr10 29069131 29069374 -116519914 + MIR SINE MIR 5 262 0 239 289 141 4 chr10 29069466 29069708 -116519580 - L1 LINE L1 -2191 3955 3681 447 246 164 30 chr10 29069906 29070466 -116518822 - L1 LINE L1 -2638 3508 2874 1615 159 3 53 chr10 29070526 29070828 -116518460 - AluJo SINE Alu -25 287 1 357 366 54 9 chr10 29071170 29071394 -116517894 - HAL1 LINE L1 -761 1746 1513 2074 117 14 10 chr10 29071467 29071757 -116517531 - AluSx SINE Alu -21 291 1 6308 128 20 27 chr10 29071769 29072613 -116516675 - L1MA3 LINE L1 0 6305 5456 2074 153 0 13 chr10 29072613 29072926 -116516362 - AluSx SINE Alu -3 309 1 6308 128 20 27 chr10 29072926 29074053 -116515235 - L1MA3 LINE L1 -849 5456 4354 571 101 25 0 chr10 29074061 29074140 -116515148 + AluSg/x SINE Alu 209 289 -23 26 30 0 0 chr10 29074758 29074791 -116514497 + AT_rich Low_complexity Low_complexity 1 33 0 1558 154 47 25 chr10 29075044 29075323 -116513965 + AluJo SINE Alu 5 289 -23 315 49 0 0 chr10 29075324 29075365 -116513923 + (CA)n Simple_repeat Simple_repeat 2 42 0 1513 239 5 46 chr10 29075670 29076084 -116513204 + MLT2C1 LTR ERVL 1 397 0 254 253 214 32 chr10 29076149 29076303 -116512985 - L1MC4a LINE L1 -1894 5914 5733 525 236 89 130 chr10 29076320 29077121 -116512167 - HAL1 LINE L1 -924 1583 816 2624 164 45 24 chr10 29077432 29077939 -116511349 - L1MB3 LINE L1 -12 6171 5654 262 250 20 60 chr10 29078240 29078340 -116510948 + MIR SINE MIR 7 102 -160 252 86 0 0 chr10 29079263 29079298 -116509990 + (TG)n Simple_repeat Simple_repeat 2 36 0 196 312 54 43 chr10 29079755 29079848 -116509440 - MIR3 SINE MIR -6 202 109 4308 139 12 145 chr10 29080064 29081105 -116508183 - MER4D LTR ERV1 0 903 1 2094 76 0 4 chr10 29081274 29081560 -116507728 + AluY SINE Alu 40 324 0 1957 133 66 36 chr10 29081562 29081924 -116507364 - THE1C LTR MaLR -2 373 1 210 71 0 0 chr10 29082046 29082074 -116507214 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 364 218 38 16 chr10 29082325 29082455 -116506833 + MIR SINE MIR 41 176 -63 2236 174 31 7 chr10 29082519 29082924 -116506364 - MSTA LTR MaLR 0 428 21 1603 198 47 0 chr10 29083270 29083589 -116505699 + MER58B DNA MER1_type 6 339 -2 805 265 57 5 chr10 29083636 29083847 -116505441 - MIR SINE MIR -10 252 31 3599 64 2 9 chr10 29084694 29085145 -116504143 + LTR7 LTR ERV1 1 448 -2 2995 112 4 32 chr10 29085147 29085619 -116503669 + HERVH LTR ERV1 1 459 -7254 3977 222 19 52 chr10 29085677 29087392 -116501896 + HERVH LTR ERV1 800 2265 -4389 * 18687 70 9 8 chr10 29087389 29089871 -116499417 + HERVH LTR ERV1 5229 7713 0 3641 58 2 9 chr10 29089871 29090322 -116498966 + LTR7 LTR ERV1 1 448 -2 197 339 0 0 chr10 29090931 29090987 -116498301 - L2 LINE L2 -43 3270 3215 1539 284 52 36 chr10 29091440 29091523 -116497765 - L2 LINE L2 -133 3180 3100 568 270 40 23 chr10 29091523 29091697 -116497591 - MER5B DNA MER1_type 0 178 2 1539 284 52 36 chr10 29091697 29092445 -116496843 - L2 LINE L2 -213 3100 2328 2195 114 0 10 chr10 29093892 29094191 -116495097 - AluSx SINE Alu -16 296 1 515 237 25 0 chr10 29094406 29094524 -116494764 - MIR SINE MIR -72 190 70 1995 116 0 69 chr10 29095866 29096184 -116493104 + AluSx SINE Alu 1 296 -16 1172 199 0 0 chr10 29096597 29096808 -116492480 - L1MB1 LINE L1 -34 6155 5945 2066 124 0 0 chr10 29096808 29097117 -116492171 - AluSx SINE Alu 0 309 1 25 0 0 0 chr10 29097413 29097438 -116491850 + AT_rich Low_complexity Low_complexity 1 25 0 2309 103 3 0 chr10 29097635 29097935 -116491353 + AluSx SINE Alu 1 301 -11 1386 175 49 8 chr10 29097942 29098205 -116491083 + AluJb SINE Alu 6 279 -33 1323 80 6 0 chr10 29098261 29098424 -116490864 + AluSp SINE Alu 11 174 -139 2088 131 0 16 chr10 29098544 29098850 -116490438 - AluJb SINE Alu 0 312 12 28 0 0 0 chr10 29099122 29099150 -116490138 + AT_rich Low_complexity Low_complexity 1 28 0 225 222 30 61 chr10 29099259 29099358 -116489930 + L1MC4 LINE L1 7947 8042 0 760 96 0 0 chr10 29099823 29099917 -116489371 + AluS SINE Alu 3 96 -216 674 270 42 20 chr10 29099931 29100260 -116489028 - L1MCc LINE L1 -4891 1532 1341 595 231 84 35 chr10 29100266 29100551 -116488737 + L1ME3A LINE L1 5153 5452 -710 314 164 60 0 chr10 29100576 29100643 -116488645 + MER115 DNA AcHobo 583 653 -40 258 125 0 42 chr10 29100676 29100724 -116488564 - L1MC4 LINE L1 -5 8037 7992 1041 278 118 25 chr10 29100742 29101120 -116488168 + L1ME3A LINE L1 5464 5914 -256 2288 102 0 0 chr10 29101120 29101413 -116487875 + AluSc SINE Alu 1 293 -16 1041 278 118 25 chr10 29101413 29101602 -116487686 + L1ME3A LINE L1 5914 6084 -86 1217 76 0 0 chr10 29101795 29101939 -116487349 - AluSc SINE Alu -143 166 23 1056 100 0 0 chr10 29101939 29102079 -116487209 + AluSg/x SINE Alu 171 310 0 22 56 0 0 chr10 29102571 29102607 -116486681 + AT_rich Low_complexity Low_complexity 1 36 0 24 0 0 0 chr10 29102639 29102663 -116486625 + AT_rich Low_complexity Low_complexity 1 24 0 2210 232 45 57 chr10 29103327 29103888 -116485400 - MLT2B3 LTR ERVL 0 554 1 1442 165 61 61 chr10 29103909 29104206 -116485082 - AluJo SINE Alu -15 297 1 256 289 0 78 chr10 29104206 29104348 -116484940 + MIR SINE MIR 65 195 -67 2110 118 6 13 chr10 29104355 29104668 -116484620 + AluSx SINE Alu 1 311 -1 1172 214 24 0 chr10 29105492 29105702 -116483586 - MER20 DNA MER1_type -4 215 1 265 299 104 28 chr10 29105908 29106052 -116483236 - MIR SINE MIR -10 252 98 916 119 8 0 chr10 29106052 29106178 -116483110 + AluSq/x SINE Alu 1 127 -185 1921 162 0 6 chr10 29106189 29106503 -116482785 + AluSx SINE Alu 1 312 0 700 149 85 14 chr10 29107127 29107268 -116482020 - L1ME3A LINE L1 -12 6158 6008 437 277 96 30 chr10 29107750 29107916 -116481372 + MER5B DNA MER1_type 2 178 0 378 322 106 24 chr10 29108413 29108621 -116480667 - MIR SINE MIR -1 261 37 2247 104 7 0 chr10 29108799 29109086 -116480202 + AluSg SINE Alu 9 297 -13 266 225 25 25 chr10 29109335 29109415 -116479873 - MLT1K LTR MaLR 0 588 509 825 272 126 60 chr10 29109429 29109959 -116479329 - MER34B LTR ERV1 0 565 1 35 0 0 0 chr10 29110021 29110056 -116479232 + AT_rich Low_complexity Low_complexity 1 35 0 4905 109 16 3 chr10 29110056 29110735 -116478553 - L1PB1 LINE L1 0 6151 5464 25 31 0 0 chr10 29110842 29110874 -116478414 + AT_rich Low_complexity Low_complexity 1 32 0 2692 88 38 0 chr10 29110962 29111304 -116477984 - THE1A LTR MaLR 0 355 1 719 359 83 16 chr10 29111512 29112003 -116477285 - MLT1K LTR MaLR -62 526 3 2395 185 54 22 chr10 29112989 29113540 -116475748 - LTR27 LTR ERV1 -141 685 3 462 269 110 0 chr10 29113774 29113919 -116475369 + L1MDa LINE L1 1001 1161 -5379 1348 185 31 10 chr10 29113919 29114209 -116475079 - LTR54 LTR ERV1 0 510 239 4488 140 11 3 chr10 29114215 29114915 -116474373 - L1MA4A LINE L1 -4 6299 5594 5065 138 25 89 chr10 29114915 29115067 -116474221 + L1M1 LINE L1 4250 4410 -1893 195 42 0 0 chr10 29115067 29115091 -116474197 + (TAAAA)n Simple_repeat Simple_repeat 4 27 0 5065 138 25 89 chr10 29115091 29116236 -116473052 + L1M1 LINE L1 4410 5438 -865 189 0 0 0 chr10 29116236 29116257 -116473031 + (CA)n Simple_repeat Simple_repeat 2 22 0 5065 138 25 89 chr10 29116257 29116390 -116472898 + L1M1 LINE L1 5438 5578 -725 899 213 72 5 chr10 29116442 29116663 -116472625 - LTR54 LTR ERV1 -274 236 1 825 180 0 0 chr10 29116681 29116803 -116472485 + FAM SINE Alu 10 131 -54 1979 214 48 67 chr10 29116805 29117465 -116471823 + L1MDa LINE L1 1300 1947 -4593 304 258 97 32 chr10 29117513 29117590 -116471698 + L1MDa LINE L1 2085 2156 -4384 5196 103 7 16 chr10 29117590 29118287 -116471001 + LTR8 LTR ERV1 1 691 0 304 258 97 32 chr10 29118287 29118364 -116470924 + L1MDa LINE L1 2156 2249 -4291 * 1578 249 100 16 chr10 29118349 29118988 -116470300 + L1MDa LINE L1 3306 3998 -2542 680 212 38 52 chr10 29118981 29119193 -116470095 + L1MDa LINE L1 3868 4076 -2464 * 2346 68 0 42 chr10 29119200 29119509 -116469779 + AluY SINE Alu 1 296 -15 5642 174 28 20 chr10 29119513 29120868 -116468420 - L1MC1 LINE L1 -122 6211 4837 995 184 12 0 chr10 29120974 29121137 -116468151 + FAM SINE Alu 1 165 -10 2377 75 7 0 chr10 29121145 29121438 -116467850 + AluY SINE Alu 1 295 -16 436 322 72 10 chr10 29121566 29121774 -116467514 - LTR33 LTR ERVL -4 517 297 683 298 44 29 chr10 29121836 29122111 -116467177 - ERVL LTR ERVL -984 4780 4502 727 209 0 0 chr10 29122417 29122555 -116466733 + FLAM_A SINE Alu 2 139 0 269 297 40 0 chr10 29123582 29123656 -116465632 - L2 LINE L2 -999 2315 2239 988 155 44 33 chr10 29123656 29123837 -116465451 + AluJo SINE Alu 38 220 -92 283 173 0 0 chr10 29123837 29123889 -116465399 + FAM SINE Alu 127 178 -1 1839 194 66 50 chr10 29124052 29124552 -116464736 - Charlie1b DNA MER1_type 0 523 16 932 262 142 16 chr10 29124725 29125042 -116464246 - L2 LINE L2 0 3313 2957 301 224 0 0 chr10 29125160 29125209 -116464079 - L2 LINE L2 -20 3252 3204 222 281 126 60 chr10 29125491 29125658 -116463630 - MIR SINE MIR -65 197 20 357 226 73 48 chr10 29126827 29126951 -116462337 - MIR SINE MIR -86 176 50 19602 32 3 0 chr10 29127222 29130352 -116458936 + L1PA4 LINE L1 3013 6147 -8 405 0 0 0 chr10 29130427 29130472 -116458816 + (CA)n Simple_repeat Simple_repeat 1 45 0 1165 119 17 0 chr10 29131087 29131263 -116458025 + L1P LINE L1 461 639 -5507 9186 25 6 1 chr10 29131271 29133137 -116456151 + L1PA4 LINE L1 4281 6154 -1 2499 190 47 6 chr10 29133180 29133674 -116455614 + L1MCa LINE L1 27 540 -5886 701 126 8 8 chr10 29133672 29133799 -116455489 + L1MCa LINE L1 1880 2006 -4420 * 2282 62 0 0 chr10 29135019 29135317 -116453971 - AluSc SINE Alu 0 308 11 270 240 67 0 chr10 29135608 29135683 -116453605 - MER116 DNA Mariner 0 80 1 1818 163 7 7 chr10 29135802 29136091 -116453197 - AluJo SINE Alu -23 289 1 549 250 8 0 chr10 29136103 29136227 -116453061 - FLAM_C SINE Alu -8 125 1 331 331 104 0 chr10 29136731 29136885 -116452403 + MIR3 SINE MIR 5 174 -34 1439 165 97 25 chr10 29137227 29137506 -116451782 + AluJo SINE Alu 2 300 -12 256 388 24 24 chr10 29139433 29139683 -116449605 + L2 LINE L2 2909 3158 -114 343 304 20 20 chr10 29139702 29139804 -116449484 - L2 LINE L2 -16 3256 3155 188 294 183 32 chr10 29140058 29140184 -116449104 + MIR3 SINE MIR 7 151 -57 1461 192 175 83 chr10 29140313 29140683 -116448605 - L1MC4 LINE L1 -1 8041 7706 1919 137 7 14 chr10 29140683 29140976 -116448312 - AluSx SINE Alu -21 291 1 1461 192 175 83 chr10 29140976 29141425 -116447863 - L1MC4 LINE L1 -336 7706 7071 794 172 0 8 chr10 29141425 29141559 -116447729 - FLAM_A SINE Alu 0 133 1 1461 192 175 83 chr10 29141559 29141610 -116447678 - L1MC4 LINE L1 -971 7071 7026 28 0 0 0 chr10 29141750 29141778 -116447510 + AT_rich Low_complexity Low_complexity 1 28 0 1860 153 7 3 chr10 29141778 29142072 -116447216 - AluSx SINE Alu -13 299 5 2204 113 0 10 chr10 29142503 29142805 -116446483 - AluSx SINE Alu -13 299 1 320 270 83 83 chr10 29143974 29144204 -116445084 + HAL1b LINE L1 15 244 -1104 1747 154 29 10 chr10 29144229 29144535 -116444753 - AluJo SINE Alu 0 312 1 983 185 6 0 chr10 29145058 29145215 -116444073 + AluJb SINE Alu 137 294 -18 353 263 142 76 chr10 29145439 29145728 -116443560 - L1 LINE L1 -2945 3201 2894 2208 119 0 6 chr10 29145744 29146055 -116443233 + AluSx SINE Alu 1 309 -3 2288 104 0 0 chr10 29146550 29146849 -116442439 + AluSx SINE Alu 1 299 -13 2176 212 40 90 chr10 29147166 29148534 -116440754 - L1ME1 LINE L1 -25 6141 4848 2034 234 177 12 chr10 29148577 29149352 -116439936 + L1M4 LINE L1 3797 4699 -1447 1008 206 32 12 chr10 29149359 29149612 -116439676 - L1MEc LINE L1 -2096 4286 4029 * 2035 247 58 33 chr10 29149610 29150105 -116439183 - L1 LINE L1 -2649 3733 3207 2230 125 0 0 chr10 29150105 29150416 -116438872 + AluSx SINE Alu 2 312 0 2035 247 58 33 chr10 29150416 29150746 -116438542 - L1 LINE L1 -3175 3207 2887 3356 85 17 4 chr10 29150852 29151324 -116437964 + L1PB1 LINE L1 5674 6151 0 250 224 52 95 chr10 29151381 29151497 -116437791 + MER21B LTR ERV1 356 466 -397 189 0 0 0 chr10 29151616 29151637 -116437651 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 1145 234 81 11 chr10 29151658 29152686 -116436602 - L1MEc LINE L1 -2667 3715 2190 949 258 48 0 chr10 29152736 29153070 -116436218 - L1MEc LINE L1 -4999 1564 1215 613 157 0 91 chr10 29153073 29153271 -116436017 - AluJ SINE Alu -3 309 130 1146 108 0 0 chr10 29153287 29153445 -116435843 + AluY SINE Alu 2 159 -152 2116 75 0 4 chr10 29153588 29153856 -116435432 + AluY SINE Alu 37 303 -8 778 180 0 0 chr10 29153856 29153984 -116435304 - AluJ SINE Alu -174 128 1 343 231 19 10 chr10 29154037 29154141 -116435147 - L1MEc LINE L1 -5461 1102 998 255 217 60 12 chr10 29154198 29154281 -116435007 - Charlie7 DNA MER1_type -2221 391 305 561 231 71 38 chr10 29154282 29154494 -116434794 + Charlie7 DNA MER1_type 381 599 -2013 22 35 0 0 chr10 29156650 29156679 -116432609 + AT_rich Low_complexity Low_complexity 1 29 0 235 294 41 0 chr10 29157241 29157427 -116431861 + (TCTA)n Simple_repeat Simple_repeat 1 193 0 341 312 229 11 chr10 29158363 29158805 -116430483 - L1ME LINE L1 -358 5804 5267 26 0 0 0 chr10 29160848 29160874 -116428414 + AT_rich Low_complexity Low_complexity 1 26 0 250 222 14 28 chr10 29161296 29161356 -116427932 - MER58A DNA MER1_type 0 224 166 434 156 13 13 chr10 29161356 29161433 -116427855 - MER58A DNA MER1_type 0 112 36 227 336 67 0 chr10 29161558 29161662 -116427626 - L2 LINE L2 -10 3303 3193 375 298 120 13 chr10 29161833 29161991 -116427297 + MER5B DNA MER1_type 1 175 -3 515 247 178 20 chr10 29164030 29164176 -116425112 + MER5A DNA MER1_type 18 186 -3 1026 178 104 0 chr10 29164184 29164386 -116424902 + MER58A DNA MER1_type 1 223 -1 209 289 0 0 chr10 29164458 29164510 -116424778 - MER5B DNA MER1_type -124 54 3 874 277 165 39 chr10 29164697 29164911 -116424377 - L2 LINE L2 -59 3254 3068 1368 100 91 0 chr10 29164911 29165121 -116424167 - MER30 DNA MER1_type 0 230 2 874 277 165 39 chr10 29165121 29165558 -116423730 - L2 LINE L2 -245 3068 2687 2462 49 10 0 chr10 29165558 29165846 -116423442 + AluY SINE Alu 4 294 -17 874 277 165 39 chr10 29165846 29166052 -116423236 - L2 LINE L2 -626 2687 2264 1093 166 78 5 chr10 29166108 29166313 -116422975 + AluJb SINE Alu 87 306 -6 2371 288 112 11 chr10 29166319 29167245 -116422043 - L2 LINE L2 -1171 2143 1124 810 293 38 0 chr10 29169910 29170149 -116419139 - MIR SINE MIR 0 262 15 21 0 0 0 chr10 29171097 29171118 -116418170 + AT_rich Low_complexity Low_complexity 1 21 0 506 310 137 51 chr10 29171573 29172025 -116417263 + MLT1K LTR MaLR 80 570 -18 303 294 46 18 chr10 29172112 29172221 -116417067 - HAL1b LINE L1 -54 1294 1183 372 279 90 75 chr10 29172382 29172474 -116416814 - L1MC4a LINE L1 -158 6027 5938 1769 164 13 13 chr10 29172474 29172785 -116416503 - AluJo SINE Alu -1 311 1 372 279 90 75 chr10 29172785 29173158 -116416130 - L1MC4a LINE L1 -247 5938 5555 622 138 28 0 chr10 29173202 29173311 -116415977 - L1PA16 LINE L1 -4 6162 6051 2327 99 0 0 chr10 29173324 29173616 -116415672 - AluSx SINE Alu -20 292 1 323 302 116 13 chr10 29173667 29173841 -116415447 - L1MC4a LINE L1 -780 5430 5239 21 36 0 0 chr10 29173923 29173951 -116415337 + AT_rich Low_complexity Low_complexity 1 28 0 425 220 93 0 chr10 29174162 29174280 -116415008 + Charlie4 DNA MER1_type 1821 1949 -12 243 242 128 71 chr10 29174672 29174883 -116414405 - L1 LINE L1 -1619 4591 4369 270 246 0 0 chr10 29175049 29175106 -116414182 - L1ME1 LINE L1 -53 6113 6057 1427 179 21 39 chr10 29175106 29175391 -116413897 + AluJo SINE Alu 1 280 -32 255 270 81 45 chr10 29175409 29175520 -116413768 - L1ME1 LINE L1 -96 6070 5956 1248 193 34 0 chr10 29175674 29175913 -116413375 - AluJo SINE Alu -21 291 45 1613 143 29 0 chr10 29175938 29176176 -116413112 + AluSq SINE Alu 3 247 -66 2232 57 0 11 chr10 29176286 29176568 -116412720 - AluY SINE Alu 0 311 33 834 129 22 22 chr10 29176687 29176826 -116412462 - AluJb SINE Alu -173 139 1 310 307 96 60 chr10 29176881 29177132 -116412156 - L1MC4a LINE L1 -1008 5202 4943 797 252 145 29 chr10 29177149 29177679 -116411609 - L2 LINE L2 -1 3312 2720 5474 121 50 8 chr10 29177679 29178648 -116410640 + L1MA4A LINE L1 5290 6298 -5 309 136 51 0 chr10 29178644 29178703 -116410585 + L1MA7 LINE L1 6140 6201 -90 * 679 274 129 70 chr10 29178723 29179110 -116410178 - MLT1J LTR MaLR 0 511 102 1634 259 110 60 chr10 29179191 29179579 -116409709 - L2 LINE L2 -582 2732 2365 189 0 0 0 chr10 29179579 29179600 -116409688 + (TTTTG)n Simple_repeat Simple_repeat 5 25 0 2342 74 3 29 chr10 29179605 29179914 -116409374 - AluSp SINE Alu -12 301 1 1634 259 110 60 chr10 29179914 29180238 -116409050 - L2 LINE L2 -952 2362 1978 700 262 81 28 chr10 29180242 29180490 -116408798 - MIR SINE MIR 0 262 2 348 266 53 41 chr10 29180490 29180654 -116408634 - L2 LINE L2 -1352 1962 1797 184 226 19 0 chr10 29180670 29180723 -116408565 - L2 LINE L2 -1618 1696 1643 1935 201 92 0 chr10 29180726 29181140 -116408148 + MER66A LTR ERV1 27 478 0 1605 318 92 21 chr10 29181140 29181911 -116407377 - L2 LINE L2 -1655 1659 834 2345 38 14 0 chr10 29181975 29182267 -116407021 - L1PA4 LINE L1 0 6155 5860 189 0 0 0 chr10 29182402 29182423 -116406865 + (T)n Simple_repeat Simple_repeat 1 21 0 338 290 63 18 chr10 29182457 29182877 -116406411 - L1MC4a LINE L1 -1523 4687 4248 252 300 59 27 chr10 29183018 29183238 -116406050 - L1MC4a LINE L1 -2201 4009 3783 370 306 44 29 chr10 29183449 29183655 -116405633 - L1MC4a LINE L1 -2747 3463 3255 31 26 0 0 chr10 29183661 29183699 -116405589 + AT_rich Low_complexity Low_complexity 1 38 0 1931 221 130 39 chr10 29183704 29184099 -116405189 - L1MD2 LINE L1 0 6359 5883 1705 166 46 3 chr10 29184099 29184383 -116404905 - AluJo SINE Alu -16 296 1 1931 221 130 39 chr10 29184383 29184624 -116404664 - L1MD2 LINE L1 -476 5883 5665 1835 174 13 0 chr10 29184841 29185139 -116404149 - AluJb SINE Alu -8 304 3 232 256 41 66 chr10 29185232 29185353 -116403935 - L1MC4a LINE L1 -3313 2897 2780 461 322 49 6 chr10 29185652 29185835 -116403453 - MIR SINE MIR -15 247 57 2390 82 0 10 chr10 29185844 29186150 -116403138 - AluSx SINE Alu -9 303 1 21 36 0 0 chr10 29186520 29186548 -116402740 + AT_rich Low_complexity Low_complexity 1 28 0 183 42 0 0 chr10 29186623 29186647 -116402641 + (TG)n Simple_repeat Simple_repeat 1 24 0 548 127 0 13 chr10 29187274 29187353 -116401935 - AluJ SINE Alu -28 284 207 687 227 0 0 chr10 29187369 29187501 -116401787 - AluJ SINE Alu -169 133 2 2259 85 7 0 chr10 29187569 29187874 -116401414 + AluSx SINE Alu 1 307 -5 407 186 39 10 chr10 29188362 29188464 -116400824 - L1M4 LINE L1 -1198 4948 4844 24 0 0 0 chr10 29188989 29189013 -116400275 + AT_rich Low_complexity Low_complexity 1 24 0 2354 77 3 0 chr10 29189398 29189698 -116399590 - AluSc SINE Alu -8 301 1 1705 157 26 0 chr10 29189832 29190137 -116399151 - L1MC1 LINE L1 -5 6328 6016 1973 101 4 4 chr10 29190137 29190405 -116398883 + AluSq SINE Alu 1 268 -45 1547 141 8 8 chr10 29190508 29190749 -116398539 + AluSp SINE Alu 71 311 -2 187 267 33 33 chr10 29191169 29191229 -116398059 + MER5A DNA MER1_type 44 103 -86 340 343 0 0 chr10 29191331 29191477 -116397811 + MERVL LTR ERVL 881 1026 -4459 270 254 0 15 chr10 29191479 29191546 -116397742 + MLT2F LTR ERVL 1 66 -597 7033 110 6 0 chr10 29191647 29192758 -116396530 + L1P LINE L1 2450 3567 -2579 2688 230 80 60 chr10 29192877 29194633 -116394655 - L1MC4a LINE L1 -4516 1625 1 2048 123 41 3 chr10 29194638 29194930 -116394358 - AluSx SINE Alu -9 303 1 353 310 60 73 chr10 29195005 29195237 -116394051 - L1ME LINE L1 -546 5575 5347 640 208 56 22 chr10 29195870 29196048 -116393240 + MER53 DNA DNA 1 184 -5 2088 127 3 0 chr10 29197215 29197506 -116391782 - AluSx SINE Alu -20 292 1 22 35 0 0 chr10 29197572 29197601 -116391687 + AT_rich Low_complexity Low_complexity 1 29 0 283 311 0 0 chr10 29197738 29197844 -116391444 + L1P LINE L1 3589 3694 -2452 930 231 65 15 chr10 29197847 29198107 -116391181 + MER82 DNA MER2_type 2 274 -379 582 262 14 0 chr10 29198228 29198369 -116390919 + MER82 DNA MER2_type 511 653 0 380 238 167 52 chr10 29198521 29198731 -116390557 + L1MC/D LINE L1 4586 4819 -1327 592 248 84 97 chr10 29199109 29199318 -116389970 + L1MC/D LINE L1 5325 5535 -635 2037 122 0 0 chr10 29199318 29199597 -116389691 + AluSg1 SINE Alu 21 299 -10 592 248 84 97 chr10 29199597 29199900 -116389388 + L1MC/D LINE L1 5535 5824 -346 27 29 0 0 chr10 29200252 29200286 -116389002 + AT_rich Low_complexity Low_complexity 1 34 0 427 253 115 35 chr10 29200977 29201151 -116388137 + MER5A DNA MER1_type 1 188 -1 24 0 0 0 chr10 29201885 29201909 -116387379 + AT_rich Low_complexity Low_complexity 1 24 0 225 256 41 83 chr10 29202106 29202227 -116387061 - MLT1H LTR MaLR 0 549 434 383 231 8 16 chr10 29202378 29202499 -116386789 - MLT1H LTR MaLR -383 166 47 450 0 0 0 chr10 29203084 29203134 -116386154 + (TA)n Simple_repeat Simple_repeat 2 51 0 1206 219 43 78 chr10 29203367 29203822 -116385466 + MLT1H LTR MaLR 3 517 -32 326 208 0 94 chr10 29204371 29204477 -116384811 - MLT1H LTR MaLR 0 549 454 243 133 0 0 chr10 29205142 29205187 -116384101 + (TTTTC)n Simple_repeat Simple_repeat 5 49 0 * 452 121 10 30 chr10 29205183 29205282 -116384006 + (TCC)n Simple_repeat Simple_repeat 3 99 0 1346 174 5 0 chr10 29205307 29205526 -116383762 + AluSg/x SINE Alu 85 304 -6 1393 193 40 33 chr10 29205532 29205807 -116383481 - AluJo SINE Alu -35 277 1 2338 94 48 23 chr10 29207455 29207806 -116381482 + THE1B LTR MaLR 1 360 -4 62 58 0 0 chr10 29208239 29208343 -116380945 + AT_rich Low_complexity Low_complexity 1 104 0 1923 164 7 3 chr10 29208400 29208704 -116380584 + AluJo SINE Alu 6 310 -2 258 324 83 85 chr10 29209283 29209898 -116379390 + L2 LINE L2 2699 3313 0 227 256 87 120 chr10 29209909 29210151 -116379137 - L2 LINE L2 -33 3239 3006 1624 174 10 24 chr10 29210341 29210635 -116378653 + AluJb SINE Alu 3 292 -20 1490 174 58 34 chr10 29210765 29211059 -116378229 + AluJo SINE Alu 2 302 -10 413 279 111 20 chr10 29211064 29211269 -116378019 - L2 LINE L2 -260 3012 2790 572 308 82 29 chr10 29211320 29211475 -116377813 - LTR33 LTR ERVL 0 521 376 1896 106 91 0 chr10 29211475 29211750 -116377538 + AluSg SINE Alu 1 300 -10 572 308 82 29 chr10 29211750 29212048 -116377240 - LTR33 LTR ERVL -145 376 44 1792 129 18 3 chr10 29212120 29212406 -116376882 - L1PB4 LINE L1 -13 6143 5854 218 56 28 0 chr10 29212412 29212448 -116376840 + (TTGTG)n Simple_repeat Simple_repeat 1 37 0 2200 108 3 3 chr10 29212448 29212744 -116376544 - AluSc SINE Alu -13 296 1 2232 118 18 33 chr10 29212746 29213080 -116376208 - L1PB4 LINE L1 -290 5866 5537 2295 112 0 0 chr10 29213080 29213376 -116375912 + AluSx SINE Alu 1 296 -16 2232 118 18 33 chr10 29213376 29213440 -116375848 - L1PB4 LINE L1 -619 5537 5474 748 299 29 17 chr10 29213974 29214215 -116375073 + MIR SINE MIR 1 244 -18 203 239 0 0 chr10 29214397 29214443 -116374845 - L2 LINE L2 -5 3308 3263 461 180 20 10 chr10 29215434 29215534 -116373754 - MER63C DNA MER1_type -5 925 825 221 156 0 47 chr10 29215534 29215598 -116373690 + A-rich Low_complexity Low_complexity 1 61 0 210 37 0 0 chr10 29215804 29215831 -116373457 + (CAAAAA)n Simple_repeat Simple_repeat 1 27 0 907 196 52 83 chr10 29215834 29215902 -116373386 - MER63C DNA MER1_type -226 835 766 1708 180 0 17 chr10 29215902 29216196 -116373092 + AluJo SINE Alu 22 310 -2 907 196 52 83 chr10 29216196 29216424 -116372864 - MER63C DNA MER1_type -295 766 547 182 33 67 0 chr10 29216424 29216454 -116372834 + T-rich Low_complexity Low_complexity 2 33 0 907 196 52 83 chr10 29216454 29216482 -116372806 - MER63C DNA MER1_type -514 547 520 934 253 109 0 chr10 29216484 29216777 -116372511 + MER58B DNA MER1_type 2 326 -15 885 203 52 44 chr10 29216776 29217047 -116372241 - MER63C DNA MER1_type -390 540 268 * 226 158 0 0 chr10 29217044 29217082 -116372206 + MER63 DNA MER1_type 489 526 -534 * 6627 195 60 30 chr10 29217143 29219614 -116369674 + L1M4c LINE L1 9 2634 -3748 279 238 89 0 chr10 29219715 29219816 -116369472 + L1M4c LINE L1 2632 2741 -3641 3951 264 202 23 chr10 29219816 29221364 -116367924 + L2 LINE L2 1078 2902 -412 292 250 53 0 chr10 29221390 29221466 -116367822 + L2 LINE L2 3186 3265 -48 2084 131 35 44 chr10 29221535 29221902 -116367386 + THE1B LTR MaLR 1 364 0 195 42 0 0 chr10 29223447 29223471 -116365817 + (T)n Simple_repeat Simple_repeat 1 24 0 341 64 0 0 chr10 29223655 29223702 -116365586 - MADE1 DNA Mariner 0 80 34 1994 238 53 46 chr10 29223719 29224421 -116364867 + L1ME3 LINE L1 5449 6155 -7 204 213 213 0 chr10 29224715 29224776 -116364512 - MER5B DNA MER1_type -101 77 4 499 316 32 0 chr10 29224885 29225043 -116364245 - HAL1 LINE L1 -1824 683 521 1428 202 93 0 chr10 29225043 29225375 -116363913 - MSTB LTR MaLR 0 426 64 2474 124 18 0 chr10 29225375 29225755 -116363533 - MSTB-int LTR MaLR -17 1634 1248 295 355 88 15 chr10 29225801 29226074 -116363214 - HAL1 LINE L1 -2070 437 145 505 237 40 0 chr10 29226164 29226309 -116362979 - L1ME3 LINE L1 0 6170 6019 963 284 30 47 chr10 29226320 29226721 -116362567 - LTR16A LTR ERVL 0 450 57 942 267 20 0 chr10 29226749 29227045 -116362243 - L1ME3 LINE L1 -151 6011 5710 1462 246 101 21 chr10 29227047 29227445 -116361843 - L1ME3 LINE L1 -2978 3168 2803 2236 116 0 0 chr10 29227445 29227737 -116361551 + AluY SINE Alu 1 292 -19 1462 246 101 21 chr10 29227737 29228186 -116361102 - L1ME3 LINE L1 -3343 2803 2223 1314 219 57 7 chr10 29228487 29228665 -116360623 - AluJo SINE Alu 0 312 112 209 33 33 0 chr10 29228665 29228695 -116360593 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1314 219 57 7 chr10 29228695 29228813 -116360475 - AluJo SINE Alu -200 112 1 1647 164 13 59 chr10 29229268 29229573 -116359715 - AluJo SINE Alu -21 291 1 2029 153 0 3 chr10 29230545 29230846 -116358442 - AluSx SINE Alu -12 300 1 359 352 83 32 chr10 29232640 29232856 -116356432 + L2 LINE L2 2560 2786 -528 919 191 0 6 chr10 29232907 29233064 -116356224 - FRAM SINE Alu -23 153 1 1656 137 8 0 chr10 29233400 29233648 -116355640 - AluSg SINE Alu 0 310 61 342 0 0 0 chr10 29234157 29234195 -116355093 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 249 327 28 9 chr10 29234215 29234322 -116354966 + L1ME3A LINE L1 5989 6097 -73 228 35 0 0 chr10 29235577 29235606 -116353682 + (GA)n Simple_repeat Simple_repeat 2 30 0 354 319 70 5 chr10 29236620 29236805 -116352483 + L2 LINE L2 3045 3241 -31 186 43 0 0 chr10 29236821 29236844 -116352444 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 894 176 29 12 chr10 29236929 29237099 -116352189 + FRAM SINE Alu 1 173 -3 1856 159 3 0 chr10 29237538 29237828 -116351460 + AluJo SINE Alu 1 291 -21 367 380 28 0 chr10 29237910 29238089 -116351199 + L3 LINE CR1 323 506 -1071 197 211 19 0 chr10 29238162 29238214 -116351074 + L3 LINE CR1 639 691 -886 1294 222 73 22 chr10 29238223 29238538 -116350750 + MER2 DNA MER2_type 15 345 0 403 391 9 5 chr10 29238547 29238759 -116350529 + L3 LINE CR1 695 907 -670 508 289 139 27 chr10 29238775 29239069 -116350219 + L3 LINE CR1 1117 1443 -134 2160 133 128 16 chr10 29240806 29241189 -116348099 + MSTA LTR MaLR 1 426 -2 2404 98 0 3 chr10 29243581 29243887 -116345401 + AluY SINE Alu 2 306 -5 2273 122 0 0 chr10 29244748 29245059 -116344229 - AluSx SINE Alu 0 312 2 213 260 87 120 chr10 29245247 29245489 -116343799 + L2 LINE L2 3006 3239 -33 258 328 78 80 chr10 29245500 29246115 -116343173 - L2 LINE L2 0 3313 2699 1931 165 7 0 chr10 29246694 29246997 -116342291 - AluJo SINE Alu -2 310 6 62 58 0 0 chr10 29247054 29247158 -116342130 + AT_rich Low_complexity Low_complexity 1 104 0 2509 94 48 23 chr10 29247591 29247942 -116341346 - THE1B LTR MaLR -4 360 1 5988 213 64 43 chr10 29249658 29251893 -116337395 + L1MB2 LINE L1 2648 5154 -2411 1346 142 47 39 chr10 29251893 29252126 -116337162 + MER46A DNA MER2_type 1 235 -1 5988 213 64 43 chr10 29252126 29253084 -116336204 + L1MB2 LINE L1 5154 6090 -1475 1361 220 37 3 chr10 29253368 29253549 -116335739 - AluJb SINE Alu -2 310 114 189 0 0 0 chr10 29253549 29253570 -116335718 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 1361 220 37 3 chr10 29253570 29253683 -116335605 - AluJb SINE Alu -198 114 6 32284 108 14 56 chr10 29254115 29254130 -116335158 - L1PA7 LINE L1 0 6154 6140 2660 129 21 0 chr10 29254130 29254511 -116334777 - L1PA16 LINE L1 -9 6157 5769 32284 108 14 56 chr10 29254511 29260915 -116328373 - L1PA7 LINE L1 -14 6140 13 1472 100 91 0 chr10 29260915 29261135 -116328153 - L1PA16 LINE L1 -381 5785 5546 213 39 0 0 chr10 29261388 29261414 -116327874 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 273 308 98 42 chr10 29262045 29262188 -116327100 - L2 LINE L2 -5 3308 3158 1679 192 14 83 chr10 29262197 29262529 -116326759 - MLT2D LTR ERVL -2 412 117 1988 153 0 7 chr10 29262529 29262837 -116326451 + AluSx SINE Alu 1 306 -6 1679 192 14 83 chr10 29262837 29262947 -116326341 - MLT2D LTR ERVL -297 117 1 1797 198 177 62 chr10 29263901 29264461 -116324827 - MLT1E3 LTR MaLR 0 624 1 1353 203 25 60 chr10 29264498 29264979 -116324309 + L1MB2 LINE L1 6438 6897 -688 * 1389 230 55 28 chr10 29264974 29265374 -116323914 + L1ME1 LINE L1 5751 6161 -5 23 0 0 0 chr10 29265622 29265645 -116323643 + AT_rich Low_complexity Low_complexity 1 23 0 623 219 4 8 chr10 29265828 29265979 -116323309 + L1MB2 LINE L1 7088 7241 -349 827 118 79 8 chr10 29265982 29266109 -116323179 + AluJo SINE Alu 1 136 -176 1123 199 103 10 chr10 29266112 29266404 -116322884 + L1MB2 LINE L1 7232 7550 -40 226 173 0 115 chr10 29266713 29266765 -116322523 + Alu SINE Alu 2 47 -253 553 237 94 57 chr10 29266799 29267183 -116322105 - L1MEd LINE L1 -4867 1252 855 356 204 0 3 chr10 29267203 29267272 -116322016 + MSTB LTR MaLR 1 67 -361 28 29 0 0 chr10 29267295 29267330 -116321958 + AT_rich Low_complexity Low_complexity 1 35 0 409 255 10 10 chr10 29267627 29267725 -116321563 + MER5B DNA MER1_type 21 118 -60 1711 200 100 13 chr10 29268677 29269057 -116320231 + MSTB LTR MaLR 14 426 0 1037 232 42 32 chr10 29269163 29269647 -116319641 - MLT1E LTR MaLR -9 584 1 576 277 83 32 chr10 29269846 29270099 -116319189 - MLT1J LTR MaLR -8 503 238 186 43 0 0 chr10 29270321 29270344 -116318944 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 781 116 27 0 chr10 29270361 29270473 -116318815 - AluJb SINE Alu -189 123 9 2021 146 7 0 chr10 29270494 29270796 -116318492 - AluSq SINE Alu -9 304 1 37 0 0 0 chr10 29270944 29270981 -116318307 + AT_rich Low_complexity Low_complexity 1 37 0 1857 228 68 20 chr10 29271540 29271997 -116317291 + MLT1D LTR MaLR 1 479 -26 27 62 0 0 chr10 29272154 29272202 -116317086 + AT_rich Low_complexity Low_complexity 1 48 0 1724 194 3 0 chr10 29272596 29272900 -116316388 + AluJo SINE Alu 1 305 -7 38 68 0 0 chr10 29273627 29273700 -116315588 + AT_rich Low_complexity Low_complexity 1 73 0 25 51 0 0 chr10 29273993 29274032 -116315256 + AT_rich Low_complexity Low_complexity 1 39 0 336 176 0 0 chr10 29274289 29274361 -116314927 - L1MA4A LINE L1 -230 6073 5998 446 272 27 82 chr10 29274393 29274650 -116314638 - L2 LINE L2 -837 2477 2235 393 198 55 11 chr10 29274789 29274880 -116314408 + MER94 DNA DNA 6 100 -34 1574 179 24 31 chr10 29275178 29275319 -116313969 + AluJo SINE Alu 1 141 -171 2418 73 0 19 chr10 29275319 29275633 -116313655 + AluY SINE Alu 1 308 -3 1574 179 24 31 chr10 29275633 29275782 -116313506 + AluJo SINE Alu 141 289 -23 610 315 12 12 chr10 29275916 29276167 -116313121 + L1ME2 LINE L1 5698 5948 -216 1099 154 0 0 chr10 29276179 29276348 -116312940 - AluSg/x SINE Alu -9 301 133 1639 61 0 5 chr10 29276350 29276546 -116312742 - AluSq SINE Alu -118 195 1 1723 192 0 0 chr10 29276903 29277241 -116312047 - AluJb SINE Alu 0 346 9 1014 109 15 0 chr10 29277244 29277381 -116311907 - AluJo SINE Alu -173 139 1 492 208 69 0 chr10 29278352 29278448 -116310840 + MLT1D LTR MaLR 10 112 -393 2007 106 60 42 chr10 29278448 29278779 -116310509 + THE1B LTR MaLR 2 338 -26 403 86 103 0 chr10 29278805 29278863 -116310425 + THE1B LTR MaLR 301 364 0 * 1980 175 56 41 chr10 29278863 29279256 -116310032 + MLT1D LTR MaLR 107 505 0 437 262 198 5 chr10 29279697 29279884 -116309404 + HAL1 LINE L1 816 1038 -1469 1750 101 27 0 chr10 29280184 29280441 -116308847 + L1PA10 LINE L1 5905 6168 0 507 273 7 0 chr10 29280448 29280598 -116308690 - L1ME LINE L1 -3312 2903 2753 1382 152 14 0 chr10 29280598 29280808 -116308480 + AluJo SINE Alu 91 303 -9 436 246 85 73 chr10 29280930 29281272 -116308016 - L1ME LINE L1 -4519 1877 1532 525 272 113 9 chr10 29281328 29281648 -116307640 - L1ME LINE L1 -5070 1135 783 1863 172 27 64 chr10 29281688 29281867 -116307421 + MSTD LTR MaLR 1 185 -211 2386 104 0 0 chr10 29281867 29282174 -116307114 - AluSx SINE Alu 0 312 6 1863 172 27 64 chr10 29282174 29282402 -116306886 + MSTD LTR MaLR 185 393 -3 1964 142 48 62 chr10 29282596 29283064 -116306224 + L1MB1 LINE L1 5703 6163 -5 2217 134 280 78 chr10 29283070 29283398 -116305890 + L1MCa LINE L1 1033 1293 -5133 243 61 0 0 chr10 29283398 29283431 -116305857 + (CA)n Simple_repeat Simple_repeat 1 33 0 2217 134 280 78 chr10 29283431 29283898 -116305390 + L1MCa LINE L1 1293 1989 -4437 1716 172 25 0 chr10 29283899 29284178 -116305110 + AluJb SINE Alu 1 286 -26 865 203 34 0 chr10 29284195 29284343 -116304945 + FRAM SINE Alu 4 156 -20 286 171 110 0 chr10 29284344 29284426 -116304862 + L1MCa LINE L1 1979 2069 -4357 5022 215 109 27 chr10 29284448 29285363 -116303925 + L1MB8 LINE L1 3403 4241 -1937 225 62 0 0 chr10 29285363 29285395 -116303893 + tRNA-Gly-GGA tRNA tRNA 7 38 -37 5022 215 109 27 chr10 29285395 29286789 -116302499 + L1MB8 LINE L1 4241 5955 -223 300 125 18 47 chr10 29286794 29286864 -116302424 + AluSp SINE Alu 120 181 -122 2346 108 68 5 chr10 29287016 29287386 -116301902 + MSTA LTR MaLR 36 428 0 1773 146 75 87 chr10 29288036 29288179 -116301109 - Tigger2a DNA MER2_type -2275 433 290 2103 133 7 3 chr10 29288179 29288487 -116300801 + AluSx SINE Alu 1 309 -3 1773 146 75 87 chr10 29288487 29288781 -116300507 - Tigger2a DNA MER2_type -2418 290 1 615 298 94 69 chr10 29288945 29289831 -116299457 + L2 LINE L2 2315 3230 -42 863 189 123 16 chr10 29290476 29290720 -116298568 - LOR1a LTR ERV1 0 497 228 2153 87 55 29 chr10 29290766 29291113 -116298175 - THE1B LTR MaLR -8 356 1 395 200 35 9 chr10 29291603 29291718 -116297570 + LTR33A LTR ERVL 405 522 -1 21 0 0 0 chr10 29291911 29291932 -116297356 + AT_rich Low_complexity Low_complexity 1 21 0 2343 89 0 3 chr10 29292015 29292319 -116296969 + AluY SINE Alu 1 303 -8 1204 121 0 28 chr10 29292319 29292501 -116296787 + AluSg/x SINE Alu 134 310 -2 372 346 62 6 chr10 29292760 29292810 -116296478 - MER5A DNA MER1_type 0 189 143 216 0 0 0 chr10 29292810 29292834 -116296454 + (CAAA)n Simple_repeat Simple_repeat 3 26 0 372 346 62 6 chr10 29292834 29292962 -116296326 - MER5A DNA MER1_type -46 143 1 531 0 0 0 chr10 29293022 29293081 -116296207 + (TG)n Simple_repeat Simple_repeat 1 59 0 257 0 30 0 chr10 29293080 29293113 -116296175 + (GA)n Simple_repeat Simple_repeat 1 34 0 * 383 148 0 0 chr10 29293319 29293380 -116295908 - L1PB1 LINE L1 -252 5899 5839 418 122 0 0 chr10 29293380 29293453 -116295835 + L1PB1 LINE L1 6076 6149 -2 2117 135 0 3 chr10 29294828 29295132 -116294156 - AluSx SINE Alu -9 303 1 2107 129 0 0 chr10 29295599 29295893 -116293395 - AluSx SINE Alu -4 308 15 1896 160 0 10 chr10 29296359 29296659 -116292629 + AluJb SINE Alu 3 299 -13 1772 174 14 0 chr10 29296971 29297321 -116291967 - L1MB4 LINE L1 -29 6151 5797 2182 132 0 0 chr10 29297335 29297639 -116291649 - AluSx SINE Alu -8 304 1 234 209 58 93 chr10 29299666 29299752 -116289536 + L2 LINE L2 3226 3308 -5 711 253 114 62 chr10 29299898 29300451 -116288837 + HAL1b LINE L1 310 891 -457 198 0 0 0 chr10 29301240 29301262 -116288026 + (TC)n Simple_repeat Simple_repeat 1 22 0 * 270 0 0 0 chr10 29301261 29301291 -116287997 + (CA)n Simple_repeat Simple_repeat 1 30 0 253 188 0 14 chr10 29301291 29301360 -116287928 + L1ME3A LINE L1 5242 5309 -837 5257 144 33 19 chr10 29301436 29302464 -116286824 + L1MA6 LINE L1 5258 6299 -1 1306 177 113 11 chr10 29302469 29302735 -116286553 + AluJb SINE Alu 1 293 -19 1052 244 61 43 chr10 29302844 29303287 -116286001 + L1ME3A LINE L1 5437 5887 -283 396 21 0 0 chr10 29303284 29303332 -116285956 + L1P LINE L1 5233 5280 -866 * 230 79 0 26 chr10 29303823 29303861 -116285427 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 1377 216 107 5 chr10 29303876 29304261 -116285027 - Zaphod DNA AcHobo 0 4031 3608 359 284 37 0 chr10 29304694 29304856 -116284432 + (TA)n Simple_repeat Simple_repeat 1 168 0 267 118 29 49 chr10 29304863 29304965 -116284323 + (TATAA)n Simple_repeat Simple_repeat 5 104 0 47 19 0 0 chr10 29304965 29305019 -116284269 + AT_rich Low_complexity Low_complexity 1 54 0 369 216 54 0 chr10 29305019 29305186 -116284102 + (TA)n Simple_repeat Simple_repeat 1 176 0 195 42 0 0 chr10 29305212 29305236 -116284052 + (TA)n Simple_repeat Simple_repeat 1 24 0 278 50 0 0 chr10 29305631 29305671 -116283617 + L1MA1 LINE L1 6263 6302 0 210 377 14 0 chr10 29305813 29305882 -116283406 + L2 LINE L2 3157 3226 -46 563 106 73 8 chr10 29307326 29307449 -116281839 + GA-rich Low_complexity Low_complexity 5 135 0 700 254 45 69 chr10 29307781 29307909 -116281379 + MER58B DNA MER1_type 5 135 -2285 2755 75 5 24 chr10 29307909 29308280 -116281008 - THE1B LTR MaLR 0 364 1 700 254 45 69 chr10 29308280 29308485 -116280803 + MER58B DNA MER1_type 135 330 -11 503 150 106 9 chr10 29308614 29308727 -116280561 + MLT1B LTR MaLR 1 124 -266 1959 122 0 0 chr10 29308743 29309006 -116280282 + AluSx SINE Alu 35 297 -15 273 119 0 0 chr10 29309084 29309126 -116280162 + (TC)n Simple_repeat Simple_repeat 2 43 0 520 224 34 7 chr10 29309144 29309291 -116279997 + MLT1B LTR MaLR 192 342 -48 352 318 46 29 chr10 29310580 29310753 -116278535 - MIR SINE MIR -40 222 47 424 315 39 39 chr10 29311974 29312155 -116277133 - MIR3 SINE MIR -21 187 41 22 0 0 0 chr10 29313166 29313188 -116276100 + AT_rich Low_complexity Low_complexity 1 22 0 204 325 0 0 chr10 29314565 29314605 -116274683 + MIR SINE MIR 31 70 -138 21 82 0 0 chr10 29315435 29315484 -116273804 + AT_rich Low_complexity Low_complexity 1 49 0 316 265 105 25 chr10 29315619 29315819 -116273469 - L1ME LINE L1 -340 5781 5566 312 294 63 56 chr10 29315955 29316207 -116273081 - L1ME LINE L1 -810 5336 5083 444 270 158 21 chr10 29317599 29317808 -116271480 + MIR SINE MIR 20 250 -12 319 305 16 53 chr10 29318396 29318586 -116270702 + MIR SINE MIR 47 229 -33 2176 106 26 3 chr10 29318767 29319069 -116270219 - AluSx SINE Alu -3 309 1 21 36 0 0 chr10 29319434 29319462 -116269826 + AT_rich Low_complexity Low_complexity 1 28 0 276 287 0 11 chr10 29319569 29319656 -116269632 - L1MC/D LINE L1 -2021 5787 5702 1064 129 0 47 chr10 29319816 29319986 -116269302 + AluSx SINE Alu 1 162 -150 23 68 0 0 chr10 29320436 29320480 -116268808 + AT_rich Low_complexity Low_complexity 1 44 0 22 80 0 0 chr10 29321823 29321873 -116267415 + AT_rich Low_complexity Low_complexity 1 50 0 260 289 46 98 chr10 29322655 29322789 -116266499 + MIR3 SINE MIR 21 144 -64 1835 157 3 20 chr10 29322789 29323095 -116266193 + AluJo SINE Alu 1 301 -11 260 289 46 98 chr10 29323095 29323154 -116266134 + MIR3 SINE MIR 144 204 -4 25 51 0 0 chr10 29323662 29323701 -116265587 + AT_rich Low_complexity Low_complexity 1 39 0 1667 105 24 4 chr10 29323802 29324079 -116265209 + AluSg SINE Alu 30 311 0 803 247 0 0 chr10 29324188 29324358 -116264930 + MIR SINE MIR 72 241 -21 1940 156 53 8 chr10 29324485 29324844 -116264444 + THE1C LTR MaLR 1 375 0 222 280 137 17 chr10 29324885 29325031 -116264257 - MER5A DNA MER1_type -27 151 4 21 0 0 0 chr10 29325134 29325155 -116264133 + AT_rich Low_complexity Low_complexity 1 21 0 3307 148 9 12 chr10 29325218 29325787 -116263501 - L1PA16 LINE L1 0 6166 5600 227 244 0 33 chr10 29326530 29326620 -116262668 + (CGGGG)n Simple_repeat Simple_repeat 5 91 0 204 190 35 0 chr10 29327577 29327635 -116261653 + T-rich Low_complexity Low_complexity 6 65 0 299 281 0 0 chr10 29328175 29328257 -116261031 - MIR3 SINE MIR -14 194 113 308 310 99 41 chr10 29328656 29328756 -116260532 + L1MC/D LINE L1 2843 2936 -3210 1632 157 27 34 chr10 29328756 29329049 -116260239 + AluJb SINE Alu 1 291 -21 308 310 99 41 chr10 29329049 29329341 -116259947 + L1MC/D LINE L1 2936 3258 -2888 29 28 0 0 chr10 29329857 29329893 -116259395 + AT_rich Low_complexity Low_complexity 1 36 0 2422 93 0 0 chr10 29330642 29330953 -116258335 - AluY SINE Alu 0 311 1 293 290 137 27 chr10 29331142 29331325 -116257963 - MIR SINE MIR -59 203 1 1409 202 41 3 chr10 29331856 29332148 -116257140 - AluJo SINE Alu -7 305 3 1520 163 42 49 chr10 29332946 29333253 -116256035 + AluJo SINE Alu 8 312 0 1071 99 17 0 chr10 29333260 29333432 -116255856 + (GAAA)n Simple_repeat Simple_repeat 2 176 0 21 36 0 0 chr10 29333518 29333546 -116255742 + AT_rich Low_complexity Low_complexity 1 28 0 1989 146 3 16 chr10 29333857 29334173 -116255115 + AluSx SINE Alu 1 312 0 6905 25 4 9 chr10 29334594 29335368 -116253920 + L1PA4 LINE L1 5386 6155 0 346 281 266 0 chr10 29335388 29335591 -116253697 + L1ME3A LINE L1 5906 6162 -8 * 418 289 59 40 chr10 29335587 29335891 -116253397 + L1MC/D LINE L1 3914 4223 -1923 1031 263 13 0 chr10 29336573 29336809 -116252479 - MIR SINE MIR -22 240 2 686 273 118 49 chr10 29336969 29337394 -116251894 + L1MC/D LINE L1 5260 5713 -2095 2432 97 0 0 chr10 29337398 29337708 -116251580 - AluSg SINE Alu 0 310 1 186 43 0 0 chr10 29338165 29338188 -116251100 + (CAT)n Simple_repeat Simple_repeat 3 25 0 353 264 0 0 chr10 29339074 29339146 -116250142 + L2 LINE L2 3201 3272 0 291 372 9 0 chr10 29339202 29339315 -116249973 + MIR SINE MIR 34 147 -115 339 283 14 67 chr10 29340524 29340670 -116248618 - MIR SINE MIR -66 142 20 2396 51 3 51 chr10 29342097 29342410 -116246878 - AluY SINE Alu -13 298 1 2392 124 36 30 chr10 29342631 29342993 -116246295 - THE1B LTR MaLR 0 364 1 1261 156 113 40 chr10 29344289 29344590 -116244698 + MER33 DNA MER1_type 2 324 0 1238 133 0 57 chr10 29344927 29345137 -116244151 + MER2 DNA MER2_type 1 198 -147 2268 121 0 0 chr10 29345202 29345508 -116243780 - AluSx SINE Alu -6 306 1 267 194 81 16 chr10 29345528 29345590 -116243698 + MER2 DNA MER2_type 264 329 -16 2111 110 7 3 chr10 29345654 29345945 -116243343 - AluSc SINE Alu -17 292 1 201 208 21 0 chr10 29345967 29346015 -116243273 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 852 198 148 16 chr10 29346955 29347198 -116242090 - ORSL DNA AcHobo 0 275 1 5334 147 20 3 chr10 29347622 29347814 -116241474 + L1MB3 LINE L1 5284 5471 -712 315 0 0 0 chr10 29347814 29347849 -116241439 + (CA)n Simple_repeat Simple_repeat 2 36 0 5334 147 20 3 chr10 29347849 29348534 -116240754 + L1MB3 LINE L1 5471 6176 -7 356 239 45 65 chr10 29348704 29348740 -116240548 - L1MC4a LINE L1 -1865 5943 5908 1843 183 0 0 chr10 29348740 29349046 -116240242 + AluJo SINE Alu 1 306 -6 356 239 45 65 chr10 29349046 29349164 -116240124 - L1MC4a LINE L1 -1900 5908 5792 228 294 78 20 chr10 29349201 29349303 -116239985 - L1MC4a LINE L1 -2258 5550 5443 21 36 0 0 chr10 29349491 29349519 -116239769 + AT_rich Low_complexity Low_complexity 1 28 0 505 300 65 60 chr10 29349630 29350443 -116238845 - L1MC4a LINE L1 -1097 5049 4233 2139 117 0 3 chr10 29350487 29350778 -116238510 - AluSx SINE Alu -22 290 1 232 200 55 0 chr10 29350809 29350864 -116238424 - L1P LINE L1 -1907 4239 4182 275 238 32 0 chr10 29351388 29351451 -116237837 - MIR SINE MIR -13 249 185 1524 65 0 0 chr10 29352445 29352631 -116236657 + L1PA6 LINE L1 5969 6154 0 234 91 0 0 chr10 29353699 29353732 -116235556 + (A)n Simple_repeat Simple_repeat 1 33 0 23 0 0 0 chr10 29354017 29354040 -116235248 + AT_rich Low_complexity Low_complexity 1 23 0 6937 119 58 38 chr10 29354339 29354512 -116234776 + Tigger3b DNA MER2_type 1 169 -2859 2020 113 3 7 chr10 29354512 29354821 -116234467 + AluSx SINE Alu 1 308 0 6937 119 58 38 chr10 29354821 29354986 -116234302 + Tigger3b DNA MER2_type 169 329 -2699 2277 100 3 7 chr10 29354986 29355285 -116234003 + AluSx SINE Alu 1 298 -14 6937 119 58 38 chr10 29355285 29355788 -116233500 + Tigger3b DNA MER2_type 329 821 -2207 230 81 27 0 chr10 29355788 29355825 -116233463 + (CTCA)n Simple_repeat Simple_repeat 1 38 0 6937 119 58 38 chr10 29355825 29355899 -116233389 + Tigger3b DNA MER2_type 821 892 -2136 1575 137 53 114 chr10 29355899 29356046 -116233242 - MER1B DNA MER1_type -2374 336 182 2274 105 0 16 chr10 29356046 29356359 -116232929 + AluSg SINE Alu 1 308 -2 1575 137 53 114 chr10 29356359 29356569 -116232719 - MER1B DNA MER1_type -2528 182 1 6937 119 58 38 chr10 29356569 29356855 -116232433 + Tigger3b DNA MER2_type 892 1230 -1 1839 182 0 3 chr10 29357379 29357676 -116231612 + AluJo SINE Alu 1 296 -16 211 219 0 0 chr10 29357677 29357718 -116231570 + (CATATA)n Simple_repeat Simple_repeat 2 42 0 238 258 217 0 chr10 29357728 29357848 -116231440 - L1ME4a LINE L1 -1 6120 5975 1169 131 66 22 chr10 29358109 29358292 -116230996 - MER1B DNA MER1_type -23 316 126 434 339 87 0 chr10 29358292 29358510 -116230778 - MIR SINE MIR -13 249 13 2567 49 0 7 chr10 29358791 29359097 -116230191 - AluY SINE Alu -7 304 1 627 78 0 52 chr10 29359687 29359802 -116229486 + (GGAA)n Simple_repeat Simple_repeat 2 110 0 213 39 0 0 chr10 29359803 29359829 -116229459 + (GAGAA)n Simple_repeat Simple_repeat 3 28 0 2242 109 7 0 chr10 29359831 29360124 -116229164 - AluSx SINE Alu -17 295 1 1047 95 12 30 chr10 29360357 29360525 -116228763 - AluSg/x SINE Alu -17 295 131 686 286 31 22 chr10 29362529 29362756 -116226532 - MIR SINE MIR -30 232 4 2206 98 3 7 chr10 29363386 29363682 -116225606 + AluSg SINE Alu 1 295 -15 313 142 3 42 chr10 29363682 29363759 -116225529 - L1M1 LINE L1 -621 5535 5459 743 299 29 17 chr10 29364281 29364522 -116224766 + MIR SINE MIR 1 244 -18 198 239 0 0 chr10 29364704 29364750 -116224538 - L2 LINE L2 -5 3308 3263 551 160 20 10 chr10 29365741 29365841 -116223447 - MER63C DNA MER1_type -5 925 825 191 35 0 35 chr10 29365843 29365872 -116223416 + (GAAA)n Simple_repeat Simple_repeat 2 29 0 21 0 0 0 chr10 29365883 29365904 -116223384 + AT_rich Low_complexity Low_complexity 1 21 0 183 42 0 0 chr10 29366109 29366133 -116223155 + (CAAAAA)n Simple_repeat Simple_repeat 1 24 0 1056 196 52 83 chr10 29366140 29366208 -116223080 - MER63C DNA MER1_type -226 834 765 1674 180 0 17 chr10 29366208 29366502 -116222786 + AluJo SINE Alu 22 310 -2 1056 196 52 83 chr10 29366502 29366730 -116222558 - MER63C DNA MER1_type -295 765 546 182 33 67 0 chr10 29366730 29366760 -116222528 + T-rich Low_complexity Low_complexity 2 33 0 1056 196 52 83 chr10 29366760 29366788 -116222500 - MER63C DNA MER1_type -514 546 519 1053 244 107 7 chr10 29366790 29367089 -116222199 + MER58B DNA MER1_type 2 330 -11 1016 203 52 44 chr10 29367082 29367353 -116221935 - MER63C DNA MER1_type -390 540 268 * 250 157 137 0 chr10 29367345 29367396 -116221892 + MER63 DNA MER1_type 480 537 -523 * 7425 195 60 30 chr10 29367449 29369919 -116219369 + L1M4c LINE L1 9 2634 -3748 330 198 99 10 chr10 29370020 29370121 -116219167 + L1M4c LINE L1 2632 2741 -3641 1343 307 109 19 chr10 29370121 29370662 -116218626 + L2 LINE L2 1078 1667 -1647 323 252 101 22 chr10 29370662 29370801 -116218487 + L2 LINE L2 1842 1991 -1323 21 0 0 0 chr10 29371500 29371521 -116217767 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr10 29372884 29372907 -116216381 + AT_rich Low_complexity Low_complexity 1 23 0 840 176 62 23 chr10 29373046 29373222 -116216066 + MER5A DNA MER1_type 3 185 -4 346 319 117 52 chr10 29374387 29374882 -116214406 + L1M2 LINE L1 387 913 -5936 342 115 0 0 chr10 29376816 29376868 -116212420 + (CA)n Simple_repeat Simple_repeat 2 53 0 21 0 0 0 chr10 29377977 29377998 -116211290 + GC_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr10 29378103 29378127 -116211161 + GC_rich Low_complexity Low_complexity 1 24 0 339 65 0 0 chr10 29379088 29379134 -116210154 + (TG)n Simple_repeat Simple_repeat 2 47 0 318 197 16 0 chr10 29380405 29380466 -116208822 - MSTD LTR MaLR -334 62 1 209 384 0 0 chr10 29380748 29380834 -116208454 + MER5A DNA MER1_type 45 130 -59 796 151 52 135 chr10 29380887 29381212 -116208076 - Charlie7 DNA MER1_type 0 2612 2315 2253 100 25 0 chr10 29381214 29381680 -116207608 - L1P4 LINE L1 -569 5594 5121 652 248 62 16 chr10 29381696 29381954 -116207334 - L1M1 LINE L1 -4289 3276 3007 992 239 183 10 chr10 29381988 29382403 -116206885 - Charlie7 DNA MER1_type -406 2206 1720 247 303 98 8 chr10 29382741 29382873 -116206415 - MIR SINE MIR 0 262 119 25 31 0 0 chr10 29383284 29383316 -116205972 + AT_rich Low_complexity Low_complexity 1 32 0 274 346 41 8 chr10 29383706 29383949 -116205339 - L1MC4a LINE L1 -399 7409 7159 391 274 65 60 chr10 29383987 29384202 -116205086 - L1MC5 LINE L1 -743 7218 7003 310 232 14 0 chr10 29384887 29385025 -116204263 + (CA)n Simple_repeat Simple_repeat 2 141 0 272 288 25 0 chr10 29385060 29385140 -116204148 - MER81 DNA DNA -32 82 1 423 193 255 0 chr10 29386393 29386532 -116202756 - MER5A DNA MER1_type -6 183 4 1925 216 6 33 chr10 29386542 29387052 -116202236 + L1MA9 LINE L1 5778 6273 -39 1436 171 51 20 chr10 29387339 29387631 -116201657 - AluJo SINE Alu -11 301 1 1127 229 109 68 chr10 29387966 29388419 -116200869 - MLT1J LTR MaLR -3 508 32 938 247 18 18 chr10 29388419 29388642 -116200646 + MER58A DNA MER1_type 2 224 0 1127 229 109 68 chr10 29388642 29388676 -116200612 - MLT1J LTR MaLR -479 32 1 2222 141 0 0 chr10 29388677 29388990 -116200298 - AluSq SINE Alu 0 313 1 2811 164 57 0 chr10 29389401 29389931 -116199357 - LTR31 LTR ERV1 -9 610 51 1684 204 10 16 chr10 29390520 29390833 -116198455 - AluJo SINE Alu -1 311 1 1987 81 153 16 chr10 29391695 29392015 -116197273 + THE1B LTR MaLR 1 364 0 25 0 0 0 chr10 29392164 29392189 -116197099 + AT_rich Low_complexity Low_complexity 1 25 0 33 43 0 0 chr10 29392382 29392429 -116196859 + AT_rich Low_complexity Low_complexity 1 47 0 337 273 0 34 chr10 29392861 29392949 -116196339 + L2 LINE L2 3005 3089 -224 213 39 0 0 chr10 29392960 29392986 -116196302 + (TTCC)n Simple_repeat Simple_repeat 1 26 0 629 202 17 6 chr10 29393010 29393188 -116196100 + CT-rich Low_complexity Low_complexity 1 180 0 1660 190 16 16 chr10 29393381 29393691 -116195597 - AluJo SINE Alu -2 310 1 330 286 136 13 chr10 29393710 29393864 -116195424 + L2 LINE L2 3119 3291 -22 2474 224 57 27 chr10 29393871 29394684 -116194604 - L1MCa LINE L1 -5279 891 49 374 216 0 0 chr10 29394962 29395050 -116194238 - L1PA16 LINE L1 0 6166 6079 3864 148 19 10 chr10 29395069 29395930 -116193358 - L1PB4 LINE L1 -176 5980 5116 569 253 87 39 chr10 29395952 29396371 -116192917 - MLT1J LTR MaLR 0 511 33 278 67 22 0 chr10 29396659 29396704 -116192584 + (TG)n Simple_repeat Simple_repeat 2 47 0 1295 166 92 87 chr10 29396781 29397172 -116192116 - MSTD LTR MaLR -3 393 1 284 247 71 12 chr10 29397884 29397969 -116191319 - MIR SINE MIR -6 256 167 3916 158 24 3 chr10 29398637 29399333 -116189955 - MER50 LTR ERV1 -23 711 1 1382 185 5 68 chr10 29400037 29400404 -116188884 - MER2 DNA MER2_type 0 344 1 2051 112 35 3 chr10 29400853 29401140 -116188148 - AluSx SINE Alu -16 296 1 233 210 16 48 chr10 29401802 29401864 -116187424 - MIR SINE MIR -113 149 90 208 259 0 0 chr10 29402015 29402069 -116187219 + A-rich Low_complexity Low_complexity 1 54 0 352 310 80 21 chr10 29404110 29404349 -116184939 - MLT1L LTR MaLR -10 605 353 330 78 0 169 chr10 29404522 29404565 -116184723 + L1MA8 LINE L1 6039 6065 -226 1640 145 4 0 chr10 29404565 29404806 -116184482 - AluSx SINE Alu -42 270 29 330 78 0 169 chr10 29404806 29404839 -116184449 + L1MA8 LINE L1 6065 6102 -189 1349 124 0 0 chr10 29404956 29405142 -116184146 + AluSg/x SINE Alu 111 296 -14 1926 127 3 45 chr10 29405995 29406309 -116182979 + AluSx SINE Alu 1 301 -11 206 355 36 9 chr10 29408601 29408711 -116180577 + L2 LINE L2 3160 3272 0 324 0 0 0 chr10 29410809 29410845 -116178443 + (TG)n Simple_repeat Simple_repeat 2 37 0 523 332 21 5 chr10 29412987 29413180 -116176108 + MIR3 SINE MIR 9 204 -4 225 298 51 72 chr10 29413530 29413812 -116175476 - L1M4 LINE L1 -1101 5045 4780 3152 96 7 0 chr10 29413812 29414258 -116175030 - L1PA10 LINE L1 -10 6158 5710 225 298 51 72 chr10 29414258 29414546 -116174742 - L1M4 LINE L1 -1366 4780 4487 512 315 16 63 chr10 29414892 29415460 -116173828 - L1M4 LINE L1 -2098 4048 3508 1695 160 34 17 chr10 29415603 29415897 -116173391 - AluJo SINE Alu -13 299 1 26 34 0 51 chr10 29416817 29416876 -116172412 + AT_rich Low_complexity Low_complexity 1 56 0 213 39 0 0 chr10 29417368 29417394 -116171894 + (TTC)n Simple_repeat Simple_repeat 2 27 0 1721 220 127 17 chr10 29418244 29418763 -116170525 - MLT1E2 LTR MaLR 0 626 51 962 141 0 0 chr10 29419149 29419291 -116169997 - AluJb SINE Alu -2 310 169 536 283 73 20 chr10 29419359 29419606 -116169682 - MIR SINE MIR 0 262 3 466 187 22 0 chr10 29419915 29420006 -116169282 - MIR SINE MIR -32 230 138 180 0 0 0 chr10 29421570 29421590 -116167698 + (T)n Simple_repeat Simple_repeat 1 20 0 1079 129 9 58 chr10 29422049 29422217 -116167071 + L1MA8 LINE L1 6077 6252 -39 1772 174 3 3 chr10 29422217 29422499 -116166789 + AluSx SINE Alu 1 282 -30 443 18 0 18 chr10 29422502 29422559 -116166729 + (TAAAA)n Simple_repeat Simple_repeat 2 57 0 1079 129 9 58 chr10 29422559 29422610 -116166678 + L1MA8 LINE L1 6254 6289 -2 1308 217 3 32 chr10 29422658 29422967 -116166321 - MLT1F1 LTR MaLR 0 567 268 246 210 0 0 chr10 29422961 29423023 -116166265 - MLT1F1 LTR MaLR -232 335 274 * 322 165 25 16 chr10 29423134 29423236 -116166052 - MLT1F1 LTR MaLR -222 371 274 263 140 0 0 chr10 29423306 29423356 -116165932 - MLT1F1 LTR MaLR -244 323 274 * 334 156 0 20 chr10 29423325 29423424 -116165864 - MLT1F1 LTR MaLR -232 335 264 263 185 0 15 chr10 29423391 29423456 -116165832 - MLT1F1 LTR MaLR -236 331 268 * 283 169 0 0 chr10 29423482 29423541 -116165747 - MLT1F1 LTR MaLR -232 335 277 246 155 17 0 chr10 29423544 29423602 -116165686 - MLT1F1 LTR MaLR -232 335 277 * 574 249 79 0 chr10 29423574 29423739 -116165549 - MLT1F1 LTR MaLR -232 335 158 372 164 0 0 chr10 29423793 29423854 -116165434 - 7SK RNA RNA 0 193 133 294 190 17 0 chr10 29423903 29423961 -116165327 - MLT1F1 LTR MaLR -508 59 1 446 294 128 41 chr10 29424049 29424393 -116164895 - L1M4 LINE L1 -2166 3980 3607 22 35 0 0 chr10 29425112 29425141 -116164147 + AT_rich Low_complexity Low_complexity 1 29 0 303 240 0 13 chr10 29425143 29425218 -116164070 - L1ME4a LINE L1 -6 6115 6042 618 237 0 0 chr10 29425246 29425410 -116163878 - FLAM_A SINE Alu 0 164 1 2200 148 16 82 chr10 29426182 29426326 -116162962 - L1MB7 LINE L1 0 6184 6032 1976 136 18 0 chr10 29426326 29426606 -116162682 - AluSx SINE Alu -27 285 1 2200 148 16 82 chr10 29426606 29426975 -116162313 - L1MB7 LINE L1 -152 6032 5705 1335 196 82 7 chr10 29426988 29427268 -116162020 - AluJo SINE Alu -11 301 1 1175 140 9 88 chr10 29427696 29427924 -116161364 + AluJo SINE Alu 87 296 -16 1557 36 5 0 chr10 29428143 29428335 -116160953 - L1PA5 LINE L1 0 6154 5962 458 258 33 82 chr10 29428411 29428717 -116160571 - L1ME LINE L1 -298 5823 5533 363 228 18 90 chr10 29429026 29429087 -116160201 - L1MA10 LINE L1 0 6334 6274 734 231 30 41 chr10 29429087 29429693 -116159595 - L1ME1 LINE L1 -44 6122 5423 248 275 56 70 chr10 29429751 29429893 -116159395 + MIR SINE MIR 73 212 -50 274 271 52 42 chr10 29429943 29430039 -116159249 + MIR3 SINE MIR 81 177 -31 231 204 0 0 chr10 29430090 29430139 -116159149 + (TA)n Simple_repeat Simple_repeat 2 50 0 21 0 0 0 chr10 29430336 29430357 -116158931 + AT_rich Low_complexity Low_complexity 1 21 0 422 275 162 27 chr10 29431178 29431549 -116157739 + MLT1H LTR MaLR 22 442 -107 636 271 6 18 chr10 29431986 29432156 -116157132 + MER5B DNA MER1_type 1 168 -10 279 93 0 0 chr10 29432581 29432624 -116156664 + MADE1 DNA Mariner 2 44 -36 342 304 36 7 chr10 29432637 29432775 -116156513 + MIR SINE MIR 120 261 -1 210 360 96 22 chr10 29432804 29432982 -116156306 - L3 LINE CR1 -155 1422 1232 1863 171 45 11 chr10 29433073 29433448 -116155840 - MLT1B LTR MaLR -2 388 1 262 208 0 99 chr10 29433616 29433717 -116155571 + LTR67 LTR ERVL 459 549 -8 2404 116 33 8 chr10 29434009 29434372 -116154916 + THE1C LTR MaLR 1 372 -3 632 183 50 0 chr10 29434567 29434714 -116154574 + MLT1J LTR MaLR 3 118 -328 316 249 183 6 chr10 29434805 29434974 -116154314 + MLT1J LTR MaLR 313 511 0 229 26 26 26 chr10 29435301 29435340 -116153948 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 189 271 29 71 chr10 29435541 29435611 -116153677 - L2 LINE L2 -2819 495 429 225 200 0 20 chr10 29435915 29435965 -116153323 + CT-rich Low_complexity Low_complexity 2 50 0 826 137 0 0 chr10 29435972 29436089 -116153199 - FLAM_C SINE Alu -16 117 1 329 239 37 0 chr10 29437951 29438060 -116151228 - L1M4 LINE L1 -3180 2966 2854 26 0 0 0 chr10 29438369 29438395 -116150893 + AT_rich Low_complexity Low_complexity 1 26 0 1925 115 79 0 chr10 29438398 29438677 -116150611 + AluSx SINE Alu 1 301 -11 207 0 0 0 chr10 29438677 29438700 -116150588 + (TA)n Simple_repeat Simple_repeat 2 24 0 248 189 27 14 chr10 29438719 29438793 -116150495 - L1M4 LINE L1 -3653 2493 2419 352 290 197 25 chr10 29439011 29439290 -116149998 + MLT1L LTR MaLR 141 467 -148 350 272 169 26 chr10 29439620 29439815 -116149473 + L1ME4a LINE L1 5694 5916 -205 212 256 122 0 chr10 29440417 29440499 -116148789 + MIR SINE MIR 100 191 -71 528 244 83 71 chr10 29441467 29441680 -116147608 + MLT1K LTR MaLR 315 533 -55 2431 88 0 3 chr10 29441680 29441985 -116147303 + AluSx SINE Alu 1 304 -8 528 244 83 71 chr10 29441985 29442025 -116147263 + MLT1K LTR MaLR 533 571 -17 1002 224 153 25 chr10 29443212 29443604 -116145684 + MLT1H LTR MaLR 71 549 0 1464 166 59 4 chr10 29445989 29446242 -116143046 + AluJo SINE Alu 40 306 -6 758 206 17 11 chr10 29447180 29447355 -116141933 + MLT1B LTR MaLR 215 390 0 27759 63 1 12 chr10 29448003 29452458 -116136830 - L1PA5 LINE L1 -157 5997 1591 609 299 69 18 chr10 29452744 29452961 -116136327 - MIR SINE MIR -24 238 11 1719 169 18 0 chr10 29453266 29453545 -116135743 - AluJo SINE Alu -14 298 15 2100 138 3 7 chr10 29453689 29453993 -116135295 - AluSx SINE Alu -9 303 1 576 250 7 0 chr10 29454518 29454666 -116134622 - L1ME LINE L1 -448 5722 5574 321 312 164 12 chr10 29455252 29455502 -116133786 - L2 LINE L2 -125 3188 2901 1336 178 0 9 chr10 29455502 29455727 -116133561 + AluJb SINE Alu 83 305 -7 2335 89 16 0 chr10 29455783 29456087 -116133201 + AluSx SINE Alu 2 310 -2 276 280 172 13 chr10 29456442 29456599 -116132689 - MIR SINE MIR 0 262 81 27 29 0 0 chr10 29457381 29457415 -116131873 + AT_rich Low_complexity Low_complexity 1 34 0 22 35 0 0 chr10 29457475 29457504 -116131784 + AT_rich Low_complexity Low_complexity 1 29 0 241 203 0 51 chr10 29459115 29459194 -116130094 + (TTAA)n Simple_repeat Simple_repeat 1 75 0 275 316 137 0 chr10 29459584 29459723 -116129565 + MIR SINE MIR 32 189 -73 200 295 16 0 chr10 29459730 29459791 -116129497 + (TATATG)n Simple_repeat Simple_repeat 3 64 0 2253 155 7 59 chr10 29459791 29460003 -116129285 + Tigger2a DNA MER2_type 1 178 -2530 1479 122 5 5 chr10 29460003 29460225 -116129063 - AluSq SINE Alu -6 307 86 2253 155 7 59 chr10 29460225 29460470 -116128818 + Tigger2a DNA MER2_type 178 434 0 279 236 205 37 chr10 29461377 29461538 -116127750 + MLT1J LTR MaLR 2 189 -322 249 309 100 0 chr10 29461862 29461972 -116127316 - MER91A DNA MER1_type -71 125 5 * 340 365 103 28 chr10 29461971 29462292 -116126996 + L2 LINE L2 2923 3267 -5 23 0 0 0 chr10 29463012 29463035 -116126253 + AT_rich Low_complexity Low_complexity 1 23 0 255 31 0 0 chr10 29463398 29463430 -116125858 + (TG)n Simple_repeat Simple_repeat 1 32 0 863 254 71 29 chr10 29464303 29464543 -116124745 + MIR SINE MIR 9 258 -4 286 388 47 8 chr10 29467733 29467991 -116121297 + L2 LINE L2 1830 2097 -1217 433 286 187 14 chr10 29469224 29469507 -116119781 - L1ME4a LINE L1 -16 6105 5774 248 252 28 37 chr10 29469563 29469670 -116119618 - L1ME4a LINE L1 -503 5618 5513 22 35 0 0 chr10 29470102 29470131 -116119157 + AT_rich Low_complexity Low_complexity 1 29 0 206 341 85 23 chr10 29473301 29473477 -116115811 + L2 LINE L2 2872 3058 -214 276 347 78 33 chr10 29473762 29474004 -116115284 - L2 LINE L2 -423 2891 2639 318 267 39 16 chr10 29474085 29474200 -116115088 + L1 LINE L1 4887 5005 -1141 2078 153 15 6 chr10 29474200 29474540 -116114748 - MER61A LTR ERV1 0 343 1 318 267 39 16 chr10 29474540 29474602 -116114686 + L1 LINE L1 5005 5064 -1082 1743 337 114 24 chr10 29474628 29476346 -116112942 + L2 LINE L2 720 2591 -723 269 258 136 77 chr10 29476671 29476892 -116112396 - L2 LINE L2 -2295 1019 786 2155 112 3 3 chr10 29476918 29477221 -116112067 - AluSx SINE Alu -9 303 1 3098 141 29 4 chr10 29477533 29478050 -116111238 - L1PB4 LINE L1 -13 6143 5614 255 356 175 6 chr10 29479064 29479224 -116110064 + MIR SINE MIR 15 201 -61 1124 152 15 108 chr10 29479634 29479903 -116109385 + AluJo SINE Alu 4 247 -65 180 111 0 0 chr10 29480005 29480032 -116109256 + (A)n Simple_repeat Simple_repeat 1 27 0 232 281 16 0 chr10 29480121 29480185 -116109103 + MIR SINE MIR 188 252 -10 2127 126 17 0 chr10 29480949 29481251 -116108037 - AluSq SINE Alu -6 307 1 600 275 60 30 chr10 29483562 29483762 -116105526 + MIR SINE MIR 8 213 -49 2700 16 7 3 chr10 29484030 29484339 -116104949 + AluY SINE Alu 1 310 -1 1378 194 114 19 chr10 29484412 29484773 -116104515 + MSTD LTR MaLR 1 395 -1 1426 195 84 22 chr10 29485067 29485436 -116103852 + L2 LINE L2 2222 2613 -701 2103 105 0 4 chr10 29485810 29486115 -116103173 + AluSc SINE Alu 4 307 0 501 252 24 39 chr10 29486119 29486325 -116102963 + L1ME1 LINE L1 2320 2522 -3874 2803 213 83 35 chr10 29486382 29487194 -116102094 + L1ME1 LINE L1 4951 5723 -512 1902 150 0 0 chr10 29487194 29487474 -116101814 + AluSx SINE Alu 1 280 -32 201 39 0 0 chr10 29487474 29487500 -116101788 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 2803 213 83 35 chr10 29487500 29487900 -116101388 + L1ME1 LINE L1 5722 6226 -9 703 206 82 11 chr10 29489337 29489448 -116099840 + MER33 DNA MER1_type 2 133 -2452 1931 99 0 0 chr10 29489448 29489701 -116099587 + AluSq SINE Alu 44 296 -17 703 206 82 11 chr10 29489701 29489773 -116099515 + MER33 DNA MER1_type 133 198 -126 2461 134 50 24 chr10 29489781 29490198 -116099090 + Tigger2a DNA MER2_type 7 434 0 623 136 48 24 chr10 29490198 29490323 -116098965 + MER33 DNA MER1_type 236 363 0 224 239 0 28 chr10 29491261 29491332 -116097956 + CT-rich Low_complexity Low_complexity 4 72 0 1240 86 0 0 chr10 29491524 29491676 -116097612 - AluSg/x SINE Alu -12 298 147 225 0 0 0 chr10 29492557 29492582 -116096706 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 1947 155 0 3 chr10 29492890 29493187 -116096101 + AluJo SINE Alu 1 296 -16 2161 118 0 0 chr10 29493725 29494012 -116095276 - AluSx SINE Alu -25 287 1 496 289 22 33 chr10 29494535 29494715 -116094573 - L3 LINE CR1 -9 1568 1391 204 389 26 9 chr10 29494993 29495106 -116094182 - MIR SINE MIR -87 121 6 267 233 12 23 chr10 29495467 29495553 -116093735 + (TATATG)n Simple_repeat Simple_repeat 3 87 0 261 305 39 39 chr10 29495565 29495646 -116093642 - L2 LINE L2 -4 3309 3226 3195 209 32 2 chr10 29495646 29496279 -116093009 + MER82 DNA MER2_type 1 652 -1 261 305 39 39 chr10 29496279 29496325 -116092963 - L2 LINE L2 -86 3227 3182 183 80 0 0 chr10 29496998 29497023 -116092265 + (GTTTG)n Simple_repeat Simple_repeat 2 26 0 413 357 6 6 chr10 29497204 29497375 -116091913 + G-rich Low_complexity Low_complexity 2 172 0 404 335 46 0 chr10 29497513 29497665 -116091623 - MIR SINE MIR 0 262 104 259 268 12 49 chr10 29497960 29498042 -116091246 - MER5A DNA MER1_type -63 126 48 578 350 27 48 chr10 29498141 29498435 -116090853 + L2 LINE L2 2977 3264 -8 348 247 66 96 chr10 29498899 29499065 -116090223 - MIR SINE MIR -74 188 28 2263 132 52 45 chr10 29499214 29499637 -116089651 - MSTB1 LTR MaLR -2 430 5 2221 117 3 0 chr10 29500388 29500686 -116088602 + AluSx SINE Alu 1 299 -13 5825 97 12 4 chr10 29500738 29501595 -116087693 + L1PA10 LINE L1 5328 6191 0 17587 56 2 0 chr10 29502042 29504322 -116084966 - L1P LINE L1 -2921 3225 942 6815 105 1 0 chr10 29504329 29505271 -116084017 + L1P LINE L1 11 953 -5193 226 320 33 33 chr10 29505701 29505823 -116083465 + L2 LINE L2 3143 3264 -8 223 247 41 0 chr10 29508138 29508235 -116081053 + (TA)n Simple_repeat Simple_repeat 1 101 0 798 308 159 10 chr10 29508567 29508957 -116080331 - L3 LINE CR1 -287 1290 843 462 226 37 92 chr10 29509172 29509240 -116080048 + MER5B DNA MER1_type 1 71 -107 1917 184 11 35 chr10 29509240 29509614 -116079674 + MLT1A1 LTR MaLR 1 365 0 462 226 37 92 chr10 29509614 29509709 -116079579 + MER5B DNA MER1_type 71 155 -23 522 301 104 6 chr10 29509761 29509924 -116079364 + MIR SINE MIR 58 236 -26 1653 155 65 25 chr10 29510123 29510401 -116078887 + AluJo SINE Alu 1 289 -23 398 280 0 93 chr10 29510579 29510648 -116078640 + MER5B DNA MER1_type 2 76 -102 1541 186 22 11 chr10 29510648 29510923 -116078365 + AluJb SINE Alu 3 280 -32 582 15 0 0 chr10 29510927 29510994 -116078294 + (GAAA)n Simple_repeat Simple_repeat 2 68 0 398 280 0 93 chr10 29510994 29511112 -116078176 + MER5B DNA MER1_type 79 176 -2 5521 227 52 45 chr10 29511221 29512995 -116076293 + L1M4 LINE L1 15 1817 -4829 241 333 32 59 chr10 29513190 29513376 -116075912 + L1M3d LINE L1 204 384 -5507 798 277 105 48 chr10 29513511 29513982 -116075306 + L1M4 LINE L1 552 1288 -5358 2247 115 0 3 chr10 29513986 29514291 -116074997 + AluSc SINE Alu 1 304 -5 258 138 0 0 chr10 29514295 29514353 -116074935 + (TA)n Simple_repeat Simple_repeat 1 58 0 1124 199 138 20 chr10 29514462 29514820 -116074468 + L1ME2 LINE L1 5236 5642 -522 367 279 165 0 chr10 29514817 29514975 -116074313 + L1ME2 LINE L1 5935 6118 -46 * 728 171 0 0 chr10 29516248 29516371 -116072917 + FRAM SINE Alu 1 40 0 275 297 93 22 chr10 29516699 29516881 -116072407 + HAL1b LINE L1 272 466 -882 1863 148 44 0 chr10 29516931 29517271 -116072017 + AluJb SINE Alu 1 353 0 295 213 38 12 chr10 29517317 29517397 -116071891 + HAL1b LINE L1 559 640 -708 2220 132 0 0 chr10 29517670 29517980 -116071308 + AluSx SINE Alu 1 310 -2 22 0 0 0 chr10 29518159 29518181 -116071107 + AT_rich Low_complexity Low_complexity 1 22 0 662 298 61 71 chr10 29518215 29518715 -116070573 + L1M4 LINE L1 2645 3148 -3496 1588 191 18 4 chr10 29518715 29518988 -116070300 + AluJo SINE Alu 5 281 -31 1018 15 31 0 chr10 29518991 29519121 -116070167 + (GAAA)n Simple_repeat Simple_repeat 1 134 0 662 298 61 71 chr10 29519121 29520417 -116068871 + L1M4 LINE L1 3150 4444 -2200 1626 196 11 0 chr10 29520417 29520693 -116068595 - AluJo SINE Alu -25 287 9 662 298 61 71 chr10 29520693 29520933 -116068355 + L1M4 LINE L1 4444 4685 -1959 880 138 0 0 chr10 29520938 29521068 -116068220 + AluSg/x SINE Alu 170 299 -11 882 239 62 19 chr10 29521092 29521301 -116067987 - MER58A DNA MER1_type 0 224 7 330 300 43 61 chr10 29521307 29521584 -116067704 + L1M4 LINE L1 4737 5008 -1636 517 177 30 103 chr10 29521590 29521743 -116067545 + L1MD3 LINE L1 6193 7981 0 510 309 63 61 chr10 29522652 29523114 -116066174 + L2 LINE L2 1898 2360 -954 331 339 17 34 chr10 29523117 29523235 -116066053 - L2 LINE L2 0 3272 3157 536 289 87 16 chr10 29523847 29524089 -116065199 - MIR SINE MIR 0 262 4 462 211 53 23 chr10 29524171 29524304 -116064984 - HAL1b LINE L1 -43 1305 1169 860 305 66 31 chr10 29524363 29524878 -116064410 - HAL1b LINE L1 -441 907 375 433 299 170 44 chr10 29524885 29525233 -116064055 - HAL1b LINE L1 -1009 1410 12 1234 167 144 30 chr10 29525315 29525578 -116063710 + AluJo SINE Alu 3 295 -17 948 64 40 0 chr10 29525579 29525704 -116063584 + AluY SINE Alu 178 307 -4 231 36 0 0 chr10 29526172 29526200 -116063088 + (GAAA)n Simple_repeat Simple_repeat 2 29 0 922 135 21 0 chr10 29526917 29527058 -116062230 - MER47A DNA MER2_type 0 366 223 1367 170 5 9 chr10 29527058 29527282 -116062006 - AluJo SINE Alu -84 228 6 1259 133 28 0 chr10 29527282 29527493 -116061795 - MER47A DNA MER2_type -149 217 1 525 275 149 58 chr10 29527635 29528017 -116061271 + L2 LINE L2 2897 3313 0 1515 193 33 13 chr10 29528025 29528326 -116060962 + AluJo SINE Alu 1 307 -5 245 370 31 52 chr10 29528360 29528649 -116060639 - L2 LINE L2 -465 2849 2567 2281 97 60 20 chr10 29528974 29529323 -116059965 + THE1B LTR MaLR 1 363 -1 287 214 8 0 chr10 29529482 29529613 -116059675 + (TA)n Simple_repeat Simple_repeat 2 133 0 324 226 294 7 chr10 29530433 29530579 -116058709 - MIR SINE MIR -71 191 4 27 29 0 0 chr10 29530695 29530729 -116058559 + AT_rich Low_complexity Low_complexity 1 34 0 227 154 77 0 chr10 29530912 29530964 -116058324 - L1MC4 LINE L1 -1339 6703 6648 231 88 0 0 chr10 29530968 29531002 -116058286 + (CA)n Simple_repeat Simple_repeat 2 35 0 769 134 0 0 chr10 29532440 29532559 -116056729 - AluSg/x SINE Alu 0 309 191 1715 178 72 35 chr10 29533013 29533057 -116056231 + MLT1B LTR MaLR 1 42 -348 1906 108 35 14 chr10 29533057 29533343 -116055945 - AluSq SINE Alu -11 302 11 1715 178 72 35 chr10 29533343 29533674 -116055614 + MLT1B LTR MaLR 42 390 0 1998 130 14 0 chr10 29533709 29533993 -116055295 - AluSx SINE Alu -3 309 22 1692 154 0 80 chr10 29534548 29534886 -116054402 + AluJo SINE Alu 1 311 -1 290 156 0 101 chr10 29535310 29535509 -116053779 + (TA)n Simple_repeat Simple_repeat 2 180 0 1812 178 7 10 chr10 29536320 29536629 -116052659 + AluJo SINE Alu 3 310 -2 180 0 0 0 chr10 29536713 29536733 -116052555 + (T)n Simple_repeat Simple_repeat 1 20 0 2440 177 9 2 chr10 29537201 29537647 -116051641 + MER6 DNA MER2_type 417 865 0 243 218 45 100 chr10 29537823 29537933 -116051355 - L1MC4 LINE L1 -15 8027 7924 247 296 12 37 chr10 29538096 29538177 -116051111 - L2 LINE L2 -4 3309 3231 2293 112 0 25 chr10 29538623 29538944 -116050344 + AluSq SINE Alu 1 313 0 301 219 51 0 chr10 29540530 29540667 -116048621 + (TA)n Simple_repeat Simple_repeat 1 144 0 1367 170 14 11 chr10 29540795 29541078 -116048210 - L1MA4 LINE L1 -11 6289 6006 984 173 0 0 chr10 29541719 29541869 -116047419 + FRAM SINE Alu 2 151 -25 216 0 0 0 chr10 29543179 29543203 -116046085 + (T)n Simple_repeat Simple_repeat 1 24 0 550 299 128 79 chr10 29543573 29544229 -116045059 - L2 LINE L2 -5 3267 2575 1015 167 0 6 chr10 29544988 29545150 -116044138 - AluSc SINE Alu -14 295 135 315 287 87 58 chr10 29545302 29546050 -116043238 + L1 LINE L1 4268 5037 -1109 1955 142 21 15 chr10 29546152 29546695 -116042593 - L1MA4 LINE L1 -640 5660 5119 270 136 17 0 chr10 29546698 29546757 -116042531 + L1PB4 LINE L1 6096 6155 -1 869 168 30 50 chr10 29546767 29546969 -116042319 + L1 LINE L1 4854 5051 -1095 499 336 36 81 chr10 29547789 29547993 -116041295 - L2 LINE L2 -2067 1247 1066 363 68 68 0 chr10 29547993 29548052 -116041236 + L1PB4 LINE L1 6093 6155 -1 499 336 36 81 chr10 29548052 29548231 -116041057 - L2 LINE L2 -2248 1066 881 27 0 0 0 chr10 29548753 29548780 -116040508 + AT_rich Low_complexity Low_complexity 1 27 0 24 32 0 0 chr10 29549839 29549870 -116039418 + AT_rich Low_complexity Low_complexity 1 31 0 2218 113 0 31 chr10 29550861 29551219 -116038069 + AluSx SINE Alu 1 348 0 1315 206 32 0 chr10 29551862 29552181 -116037107 + AluJo SINE Alu 1 328 0 273 265 60 0 chr10 29552384 29552467 -116036821 - HsTC2 DNA Tc2 -11 1887 1800 1352 209 43 0 chr10 29552581 29552859 -116036429 - AluJb SINE Alu -22 290 1 300 245 31 71 chr10 29552882 29552980 -116036308 + L1ME4a LINE L1 5735 5828 -1980 311 264 110 0 chr10 29553060 29553151 -116036137 + L1ME4a LINE L1 5997 6097 -24 677 221 61 17 chr10 29553251 29553290 -116035998 - MER3 DNA MER1_type -9 200 164 1729 167 44 3 chr10 29553290 29553583 -116035705 - AluSx SINE Alu -7 305 1 677 221 61 17 chr10 29553583 29553724 -116035564 - MER3 DNA MER1_type -45 164 12 351 206 92 8 chr10 29554049 29554180 -116035108 - Charlie2a DNA MER1_type -5 2857 2716 521 201 35 30 chr10 29554182 29554351 -116034937 - Charlie2a DNA MER1_type -1220 1642 1473 190 132 38 0 chr10 29554432 29554485 -116034803 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 371 254 0 26 chr10 29554490 29554604 -116034684 - Charlie2b DNA MER1_type -2116 666 556 240 289 21 31 chr10 29554605 29554702 -116034586 - Charlie2b DNA MER1_type -2553 309 214 231 281 0 0 chr10 29554740 29554804 -116034484 + (CATATA)n Simple_repeat Simple_repeat 4 67 0 332 333 213 21 chr10 29554860 29555611 -116033677 + L2 LINE L2 1755 2649 -665 22 0 0 0 chr10 29556390 29556412 -116032876 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr10 29556917 29556939 -116032349 + AT_rich Low_complexity Low_complexity 1 22 0 23617 120 12 77 chr10 29557009 29561725 -116027563 + L1P LINE L1 9 4421 -1725 931 137 0 0 chr10 29562358 29562497 -116026791 + AluSg/x SINE Alu 169 307 -3 568 308 52 15 chr10 29562523 29562851 -116026437 - L1M4 LINE L1 -1264 4882 4543 7103 52 7 2 chr10 29563277 29565018 -116024270 + L1PA7 LINE L1 4407 6153 -1 222 324 59 39 chr10 29565144 29565246 -116024042 - MIR3 SINE MIR -23 185 82 2241 130 0 0 chr10 29567562 29567869 -116021419 + AluSx SINE Alu 1 307 -5 1782 153 11 14 chr10 29568500 29568819 -116020469 + AluJo SINE Alu 1 318 0 2507 253 9 9 chr10 29568823 29569476 -116019812 + MER82 DNA MER2_type 1 653 0 239 263 74 21 chr10 29569814 29569909 -116019379 + L2 LINE L2 3164 3263 -50 2259 106 12 0 chr10 29571158 29571478 -116017810 - L1PA15 LINE L1 -6 6159 5836 3676 122 16 2 chr10 29571478 29572193 -116017095 + L1PA15 LINE L1 5109 5830 -335 554 286 41 27 chr10 29572246 29572642 -116016646 - L1MC4 LINE L1 -624 7418 7018 284 225 0 11 chr10 29572687 29572776 -116016512 + (TA)n Simple_repeat Simple_repeat 1 88 0 894 255 34 45 chr10 29572781 29573247 -116016041 + L1MCa LINE L1 1038 1498 -4928 1786 190 9 3 chr10 29573255 29573597 -116015691 - MLT1A1 LTR MaLR -1 364 21 542 247 13 13 chr10 29573603 29573761 -116015527 + L1MCa LINE L1 1684 1841 -4766 248 274 128 10 chr10 29574420 29574495 -116014793 + L1MD3 LINE L1 6439 6530 -1465 2663 123 33 26 chr10 29574495 29574925 -116014363 + Tigger2a DNA MER2_type 1 433 -1 248 274 128 10 chr10 29574925 29574951 -116014337 + L1MD3 LINE L1 6530 6552 -1443 * 1529 260 43 11 chr10 29574943 29575662 -116013626 + L1MCa LINE L1 2793 3534 -2892 324 290 51 0 chr10 29576517 29576693 -116012595 - LTR33A LTR ERVL -2 521 337 279 150 0 50 chr10 29576755 29576815 -116012473 - LTR33A LTR ERVL -327 196 140 26 30 0 0 chr10 29578459 29578492 -116010796 + AT_rich Low_complexity Low_complexity 1 33 0 276 306 298 8 chr10 29579190 29579311 -116009977 + MER91A DNA MER1_type 19 174 -22 693 181 36 22 chr10 29579682 29579820 -116009468 - AluJo SINE Alu -60 252 113 416 269 254 21 chr10 29579922 29580115 -116009173 - HAL1 LINE L1 -1778 729 492 313 284 55 0 chr10 29580416 29580525 -116008763 + L1ME LINE L1 5529 5643 -478 343 271 181 30 chr10 29580786 29580952 -116008336 - HAL1 LINE L1 -2265 242 52 31 0 0 0 chr10 29581390 29581421 -116007867 + AT_rich Low_complexity Low_complexity 1 31 0 630 306 56 46 chr10 29582506 29583023 -116006265 - ERVL LTR ERVL -450 5314 4793 4913 233 70 20 chr10 29583438 29584062 -116005226 - L1ME1 LINE L1 -306 6254 5662 2186 113 0 22 chr10 29584062 29584380 -116004908 - AluY SINE Alu 0 311 1 4913 233 70 20 chr10 29584380 29586401 -116002887 - L1ME1 LINE L1 -898 5662 3468 4999 182 69 15 chr10 29586512 29588322 -116000966 + L1PA8 LINE L1 4248 6160 -12 470 188 0 0 chr10 29588322 29588407 -116000881 - AluSq/x SINE Alu -182 130 46 396 0 0 0 chr10 29588407 29588451 -116000837 + (TATG)n Simple_repeat Simple_repeat 2 45 0 2498 255 51 20 chr10 29588540 29590050 -115999238 - L1ME1 LINE L1 -3285 3255 1732 2132 121 0 26 chr10 29590626 29590982 -115998306 - AluSx SINE Alu 0 312 1 23 54 0 0 chr10 29590987 29591024 -115998264 + AT_rich Low_complexity Low_complexity 1 37 0 1995 122 25 0 chr10 29591514 29591840 -115997448 - AluSx SINE Alu 0 333 1 2374 259 54 20 chr10 29593270 29593755 -115995533 - L1ME1 LINE L1 -5016 1524 1057 2140 128 3 0 chr10 29593755 29594051 -115995237 - AluSx SINE Alu -15 297 1 2374 259 54 20 chr10 29594051 29594863 -115994425 - L1ME1 LINE L1 -5483 1057 22 22 0 0 0 chr10 29595581 29595603 -115993685 + AT_rich Low_complexity Low_complexity 1 22 0 189 287 78 52 chr10 29595786 29595901 -115993387 - L3 LINE CR1 -263 1314 1197 338 248 248 13 chr10 29596761 29596910 -115992378 - L2 LINE L2 0 3313 3130 1799 209 62 66 chr10 29597912 29598491 -115990797 + L1ME3A LINE L1 5509 6085 -85 355 241 48 0 chr10 29598576 29598721 -115990567 + L1MD3 LINE L1 7842 7993 -2 835 165 0 0 chr10 29598896 29599017 -115990271 - FLAM_C SINE Alu -22 121 1 2261 229 76 40 chr10 29600485 29601258 -115988030 - L1ME2 LINE L1 0 6164 5359 1828 134 64 40 chr10 29601258 29601587 -115987701 - MER1B DNA MER1_type 0 337 1 2261 229 76 40 chr10 29601587 29601620 -115987668 - L1ME2 LINE L1 -805 5359 5329 477 163 23 0 chr10 29601624 29601710 -115987578 - AluSg/x SINE Alu -14 295 208 653 290 48 17 chr10 29602418 29602649 -115986639 + MIR SINE MIR 9 246 -16 2268 114 0 0 chr10 29603629 29603926 -115985362 - AluSx SINE Alu -15 297 1 204 125 0 0 chr10 29603972 29604004 -115985284 + (TG)n Simple_repeat Simple_repeat 1 32 0 498 371 36 46 chr10 29604622 29605010 -115984278 - L2 LINE L2 -60 3212 2829 186 103 0 0 chr10 29605508 29605537 -115983751 + (CAG)n Simple_repeat Simple_repeat 1 29 0 484 265 136 54 chr10 29605993 29606325 -115982963 - MLT1J LTR MaLR 0 511 153 981 167 172 0 chr10 29606380 29606566 -115982722 - AluJo SINE Alu -8 304 87 626 261 29 0 chr10 29606580 29606818 -115982470 - L1MEc LINE L1 -3686 2529 2285 347 291 99 45 chr10 29606850 29607073 -115982215 - L1MEc LINE L1 -4135 2261 2027 525 206 69 28 chr10 29607274 29607453 -115981835 - L1MA10 LINE L1 0 6334 5988 262 246 0 0 chr10 29607478 29607539 -115981749 - L1MEc LINE L1 -6300 96 36 837 270 57 63 chr10 29607613 29608633 -115980655 - L1MEd LINE L1 -4688 1622 561 572 288 106 19 chr10 29608668 29609213 -115980075 - L1MC4a LINE L1 -722 5432 5284 258 111 16 159 chr10 29609895 29609958 -115979330 - MER2 DNA MER2_type -12 333 280 1396 220 10 30 chr10 29609989 29610289 -115978999 + AluJo SINE Alu 1 294 -18 1949 130 36 20 chr10 29611247 29611368 -115977920 + AluSx SINE Alu 1 119 -193 186 71 0 0 chr10 29611368 29611396 -115977892 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 1949 130 36 20 chr10 29611396 29611575 -115977713 + AluSx SINE Alu 119 306 -6 396 288 36 39 chr10 29611732 29612013 -115977275 + L1ME LINE L1 5533 5812 -309 2186 105 3 7 chr10 29612013 29612309 -115976979 - AluSc SINE Alu -14 295 1 606 255 68 29 chr10 29612313 29612614 -115976674 - L1M4c LINE L1 -4870 1443 777 25 37 0 0 chr10 29612806 29612833 -115976455 + GC_rich Low_complexity Low_complexity 1 27 0 515 234 14 95 chr10 29612958 29613180 -115976108 + MER3 DNA MER1_type 6 209 0 1753 168 3 32 chr10 29613298 29613607 -115975681 - AluJo SINE Alu -12 300 1 356 375 85 9 chr10 29614109 29614333 -115974955 + MIR SINE MIR 3 243 -19 604 74 0 0 chr10 29614640 29614735 -115974553 + L1MA7 LINE L1 6196 6290 -1 2214 94 0 10 chr10 29614744 29615087 -115974201 + AluSq SINE Alu 1 340 0 22 0 0 0 chr10 29615318 29615340 -115973948 + AT_rich Low_complexity Low_complexity 1 22 0 493 184 41 0 chr10 29615673 29615771 -115973517 - MER99 DNA DNA -725 103 2 203 231 77 88 chr10 29615776 29615867 -115973421 - MER91A DNA MER1_type -104 92 3 250 152 0 45 chr10 29616093 29616159 -115973129 + CT-rich Low_complexity Low_complexity 4 66 0 561 265 84 50 chr10 29618990 29619228 -115970060 - MIR SINE MIR -15 247 2 592 170 0 0 chr10 29619361 29619455 -115969833 + AluJ/FLAM SINE Alu 4 97 -215 273 98 0 0 chr10 29619467 29619508 -115969780 + (GGGGA)n Simple_repeat Simple_repeat 4 44 0 1443 231 64 32 chr10 29619638 29620438 -115968850 - L1MDa LINE L1 -3562 2978 2153 3933 223 73 23 chr10 29621077 29622649 -115966639 - L1MDa LINE L1 -4379 2161 251 252 0 0 0 chr10 29622649 29622677 -115966611 + (TTG)n Simple_repeat Simple_repeat 3 30 0 3933 223 73 23 chr10 29622677 29622942 -115966346 - L1MDa LINE L1 -6289 251 1 2019 256 79 22 chr10 29622934 29623875 -115965413 - L1M4c LINE L1 -4489 1895 902 * 376 178 0 0 chr10 29623886 29623959 -115965329 - MSTC LTR MaLR -355 73 1 765 325 116 37 chr10 29623959 29625112 -115964176 + L2 LINE L2 1575 3123 -190 350 252 274 0 chr10 29625676 29625811 -115963477 - MIR SINE MIR -10 252 81 1960 154 0 0 chr10 29625908 29626187 -115963101 - AluSx SINE Alu -33 279 1 211 197 115 16 chr10 29626202 29626263 -115963025 + MIR SINE MIR 126 192 -70 812 256 75 34 chr10 29626272 29626592 -115962696 - MER46C DNA MER2_type -5 333 1 325 269 115 0 chr10 29626715 29626819 -115962469 + MIR SINE MIR 103 218 -44 2219 102 0 3 chr10 29626819 29627114 -115962174 + AluSg SINE Alu 1 294 -16 21 0 0 0 chr10 29627155 29627176 -115962112 + AT_rich Low_complexity Low_complexity 1 21 0 894 234 92 107 chr10 29628335 29628998 -115960290 + LTR50 LTR ERVL 20 672 -123 39 22 0 0 chr10 29630328 29630374 -115958914 + AT_rich Low_complexity Low_complexity 1 46 0 450 152 0 0 chr10 29630381 29630447 -115958841 - AluS SINE Alu -26 285 220 906 118 77 72 chr10 29630554 29630749 -115958539 - L1PA16 LINE L1 -247 5919 5724 1251 169 78 13 chr10 29630842 29631073 -115958215 - AluJo SINE Alu -13 299 54 606 263 105 19 chr10 29631089 29631355 -115957933 - HERVL LTR ERVL -1230 4424 4136 211 227 59 118 chr10 29631358 29631477 -115957811 - L3 LINE CR1 -77 1500 1389 1254 111 53 0 chr10 29631747 29631954 -115957334 - L1MB3 LINE L1 -3 6180 5963 441 265 57 62 chr10 29633196 29633471 -115955817 + LTR16A LTR ERVL 147 438 -12 429 353 56 15 chr10 29633482 29633751 -115955537 + L2 LINE L2 2623 2902 -412 240 220 20 0 chr10 29633826 29633876 -115955412 + L2 LINE L2 3263 3313 0 1615 166 24 104 chr10 29634369 29634545 -115954743 + MLT1B LTR MaLR 1 190 -200 1700 147 45 49 chr10 29634545 29634831 -115954457 + AluJb SINE Alu 1 285 -27 1615 166 24 104 chr10 29634831 29635075 -115954213 + MLT1B LTR MaLR 190 387 -3 2468 124 0 8 chr10 29635165 29635545 -115953743 - MER1A DNA MER1_type 0 529 153 352 333 0 16 chr10 29635885 29636011 -115953277 - L2 LINE L2 -23 3290 3167 868 179 0 73 chr10 29636022 29636201 -115953087 + FRAM SINE Alu 1 166 0 1826 115 0 95 chr10 29636861 29637165 -115952123 + AluSx SINE Alu 1 275 -37 2093 183 52 7 chr10 29637353 29637796 -115951492 + MLT1D LTR MaLR 31 493 -12 245 304 14 0 chr10 29637855 29637924 -115951364 + L2 LINE L2 3203 3272 0 1006 151 5 48 chr10 29638263 29638449 -115950839 + AluSg/x SINE Alu 132 309 -1 1740 124 0 93 chr10 29638717 29639039 -115950249 - AluJo SINE Alu -20 292 1 266 333 0 10 chr10 29639219 29639318 -115949970 - MIR3 SINE MIR -3 205 108 1559 208 3 3 chr10 29640970 29641259 -115948029 + AluJo SINE Alu 1 289 -23 385 321 42 9 chr10 29641558 29641891 -115947397 - L1M4c LINE L1 -4022 2362 2019 400 186 12 12 chr10 29641934 29642020 -115947268 - L1MD1 LINE L1 -16 6226 6141 2820 221 16 10 chr10 29642070 29642749 -115946539 - L1MD1 LINE L1 -72 6170 5488 974 180 45 36 chr10 29642775 29642997 -115946291 - MLT1A2 LTR MaLR -133 241 18 1545 199 151 5 chr10 29643015 29643432 -115945856 - MLT1A2-int LTR MaLR 0 1735 1258 2303 153 49 14 chr10 29643501 29643793 -115945495 - L1MC1 LINE L1 -177 6156 5841 1677 211 25 25 chr10 29643793 29644118 -115945170 + MLT1A1 LTR MaLR 1 328 -37 2066 112 44 0 chr10 29644118 29644414 -115944874 - AluSc SINE Alu 0 309 1 1677 211 25 25 chr10 29644414 29644453 -115944835 + MLT1A1 LTR MaLR 327 365 0 2303 153 49 14 chr10 29644453 29644605 -115944683 - L1MC1 LINE L1 -492 5841 5696 790 229 16 28 chr10 29644606 29644859 -115944429 - L1MD1 LINE L1 -2092 4054 3805 1645 244 46 28 chr10 29644905 29645619 -115943669 - L1MD1 LINE L1 -2475 3671 2945 2617 146 6 2 chr10 29645638 29646119 -115943169 + L1 LINE L1 4478 4960 -1186 2910 128 17 50 chr10 29646140 29646657 -115942631 + L1PA16 LINE L1 5660 6159 -7 323 306 211 33 chr10 29647140 29647476 -115941812 + L2 LINE L2 2221 2616 -698 196 255 39 59 chr10 29647660 29647762 -115941526 + L2 LINE L2 2977 3076 -196 342 0 0 0 chr10 29648568 29648606 -115940682 + (TG)n Simple_repeat Simple_repeat 2 39 0 2529 92 14 0 chr10 29648993 29649351 -115939937 - L1PB1 LINE L1 0 6151 5789 862 330 104 29 chr10 29649398 29650119 -115939169 + L2 LINE L2 1840 2614 -700 311 333 10 0 chr10 29650251 29650353 -115938935 + MER5A DNA MER1_type 1 103 -86 1436 178 37 40 chr10 29650499 29650797 -115938491 - AluJb SINE Alu -15 297 1 320 359 94 6 chr10 29651114 29651284 -115938004 + L2 LINE L2 3087 3271 -1 3673 34 2 0 chr10 29651329 29651767 -115937521 + L1PA4 LINE L1 5716 6154 -1 187 325 0 12 chr10 29651927 29652010 -115937278 - L2 LINE L2 -688 2626 2545 2880 190 23 29 chr10 29652061 29652681 -115936607 - MLT1E3 LTR MaLR 0 624 9 2181 103 3 0 chr10 29653152 29653444 -115935844 + AluSx SINE Alu 1 293 -19 24 0 0 0 chr10 29654061 29654085 -115935203 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr10 29654232 29654254 -115935034 + AT_rich Low_complexity Low_complexity 1 22 0 816 152 0 0 chr10 29654290 29654415 -115934873 - FRAM SINE Alu -10 166 42 312 161 18 0 chr10 29654415 29654471 -115934817 + MSTB1 LTR MaLR 271 327 -105 372 184 58 29 chr10 29654594 29654768 -115934520 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 561 320 71 0 chr10 29655092 29655289 -115933999 - MIR SINE MIR 0 262 52 359 331 143 15 chr10 29655354 29655620 -115933668 - HAL1 LINE L1 -756 1751 1452 2072 112 42 68 chr10 29655680 29656065 -115933223 - THE1C LTR MaLR 0 375 1 979 249 138 13 chr10 29656653 29657051 -115932237 - MER20B DNA MER1_type -29 754 307 1185 162 13 40 chr10 29658037 29658265 -115931023 - AluJb SINE Alu -8 304 83 188 179 0 26 chr10 29658535 29658574 -115930714 + L2 LINE L2 3217 3254 -18 457 292 72 26 chr10 29659760 29659955 -115929333 + MIR SINE MIR 3 206 -56 2517 71 0 0 chr10 29660291 29660599 -115928689 + AluY SINE Alu 1 308 -3 837 271 31 9 chr10 29660740 29660969 -115928319 - MIR SINE MIR -11 251 18 997 98 0 0 chr10 29662109 29662241 -115927047 + FLAM_C SINE Alu 1 132 -1 2118 123 0 7 chr10 29665273 29665575 -115923713 - AluSx SINE Alu -12 300 1 560 179 0 0 chr10 29666690 29666785 -115922503 - AluJb SINE Alu -28 284 190 1597 186 0 4 chr10 29666788 29667057 -115922231 - AluJb SINE Alu -44 268 1 235 233 95 17 chr10 29668939 29669055 -115920233 + L1ME LINE L1 28 152 -5918 274 331 38 6 chr10 29669218 29669378 -115919910 + L1ME LINE L1 320 484 -5586 1825 265 114 26 chr10 29669544 29669672 -115919616 + L1ME LINE L1 526 641 -5439 242 29 29 0 chr10 29669672 29669707 -115919581 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 1825 265 114 26 chr10 29669707 29670013 -115919275 + L1ME LINE L1 641 919 -5161 180 0 0 0 chr10 29670013 29670033 -115919255 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1825 265 114 26 chr10 29670033 29671044 -115918244 + L1ME LINE L1 919 2075 -4005 450 0 0 0 chr10 29671049 29671099 -115918189 + (CA)n Simple_repeat Simple_repeat 2 51 0 389 221 81 23 chr10 29671101 29671273 -115918015 + L1 LINE L1 3821 4002 -2144 1308 181 26 20 chr10 29671354 29671696 -115917592 + L1M4 LINE L1 4981 5324 -822 1941 154 7 7 chr10 29671696 29672001 -115917287 + AluSx SINE Alu 1 305 -7 1340 188 60 94 chr10 29672005 29672114 -115917174 + L1 LINE L1 3973 4084 -2062 1927 130 0 68 chr10 29672114 29672437 -115916851 + AluSx SINE Alu 1 301 -11 1340 188 60 94 chr10 29672437 29672616 -115916672 + L1 LINE L1 4084 4268 -1878 333 47 0 0 chr10 29672616 29672659 -115916629 + (CA)n Simple_repeat Simple_repeat 2 44 0 1340 188 60 94 chr10 29672659 29672870 -115916418 + L1 LINE L1 4268 4456 -1690 187 303 15 45 chr10 29673000 29673066 -115916222 - MER5B DNA MER1_type -83 95 32 1467 93 44 4 chr10 29673080 29673305 -115915983 + L1PA8 LINE L1 5938 6171 -1 241 253 157 10 chr10 29673318 29673529 -115915759 - L1MC/D LINE L1 -705 5817 5576 1995 147 3 0 chr10 29673602 29673901 -115915387 - AluSx SINE Alu -12 300 1 228 346 87 51 chr10 29673901 29674271 -115915017 - L2 LINE L2 -521 2793 2411 424 355 101 14 chr10 29674480 29674826 -115914462 - L2 LINE L2 -2315 999 624 264 216 23 23 chr10 29674832 29674920 -115914368 + MER20B DNA MER1_type 2 89 -694 2328 109 0 0 chr10 29675093 29675397 -115913891 - AluSx SINE Alu -8 304 1 750 180 71 42 chr10 29675642 29675881 -115913407 + MER20B DNA MER1_type 515 760 -23 2304 70 11 7 chr10 29676986 29677273 -115912015 - AluY SINE Alu -23 288 1 42 0 0 0 chr10 29677659 29677701 -115911587 + AT_rich Low_complexity Low_complexity 1 42 0 1579 79 34 38 chr10 29677712 29677758 -115911530 - L1MA1 LINE L1 -4 6298 6253 192 40 0 0 chr10 29677758 29677783 -115911505 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2194 106 0 3 chr10 29677783 29678066 -115911222 - AluSc SINE Alu -27 282 1 1579 79 34 38 chr10 29678066 29678284 -115911004 - L1MA1 LINE L1 -47 6255 6034 506 287 102 0 chr10 29678299 29678466 -115910822 - MIR SINE MIR -13 249 66 6443 206 53 107 chr10 29678762 29678911 -115910377 - L1MCa LINE L1 -912 5514 5359 2394 80 3 0 chr10 29678911 29679213 -115910075 + AluY SINE Alu 1 303 -8 6443 206 53 107 chr10 29679213 29680321 -115908967 - L1MCa LINE L1 -1067 5359 4193 227 191 0 0 chr10 29680321 29680363 -115908925 - AluSx SINE Alu -6 296 255 1634 134 0 0 chr10 29680363 29680579 -115908709 - AluSx SINE Alu -96 216 1 6443 206 53 107 chr10 29680579 29680720 -115908568 - L1MCa LINE L1 -2232 4194 4047 302 211 39 39 chr10 29680720 29680824 -115908464 - MER46A DNA MER2_type -2 234 131 6443 206 53 107 chr10 29680824 29682810 -115906478 - L1MCa LINE L1 -2379 4047 2180 1933 157 0 25 chr10 29682810 29683129 -115906159 - AluJb SINE Alu -1 311 1 461 297 18 0 chr10 29683261 29683426 -115905862 + L1ME3A LINE L1 4458 4625 -1521 377 210 25 95 chr10 29683498 29683698 -115905590 + L1ME3A LINE L1 5377 5562 -600 1866 184 70 25 chr10 29683713 29684115 -115905173 + MSTB1 LTR MaLR 1 420 -12 750 276 68 13 chr10 29684185 29684496 -115904792 + L1ME3A LINE L1 5613 5940 -230 2026 156 13 0 chr10 29684497 29684799 -115904489 + AluSx SINE Alu 1 306 -6 327 301 104 38 chr10 29684943 29685289 -115903999 + HAL1b LINE L1 230 598 -750 2345 84 0 7 chr10 29686520 29686829 -115902459 + AluY SINE Alu 1 307 -4 389 321 146 49 chr10 29687111 29687641 -115901647 + L2 LINE L2 2720 3289 -24 4454 213 92 27 chr10 29688845 29690210 -115899078 - Charlie1a DNA MER1_type 0 1455 3 2900 170 34 80 chr10 29690389 29691161 -115898127 + L1MB8 LINE L1 5437 6172 -6 382 211 11 0 chr10 29691233 29691328 -115897960 + MER53 DNA DNA 94 189 0 2136 118 3 0 chr10 29691393 29691690 -115897598 + AluSx SINE Alu 1 298 -14 252 338 35 98 chr10 29692060 29692375 -115896913 + L2 LINE L2 2697 2956 -316 2383 107 0 0 chr10 29692375 29692675 -115896613 - AluSx SINE Alu -12 300 1 252 338 35 98 chr10 29692675 29692956 -115896332 + L2 LINE L2 2956 3253 -19 782 119 16 0 chr10 29692989 29693115 -115896173 + L1MA3 LINE L1 6178 6305 0 2081 131 10 10 chr10 29693487 29693800 -115895488 + AluSq SINE Alu 1 313 0 1754 154 33 27 chr10 29694146 29694476 -115894812 - THE1B LTR MaLR -32 332 1 859 118 0 0 chr10 29694663 29694782 -115894506 - AluSq/x SINE Alu -194 119 1 25 0 0 0 chr10 29695415 29695440 -115893848 + AT_rich Low_complexity Low_complexity 1 25 0 1734 174 3 3 chr10 29695543 29695830 -115893458 - AluJo SINE Alu -25 287 1 26 88 0 0 chr10 29695885 29695953 -115893335 + AT_rich Low_complexity Low_complexity 1 68 0 1885 155 7 19 chr10 29696430 29696739 -115892549 + AluSx SINE Alu 1 305 -7 186 150 0 0 chr10 29699436 29699476 -115889812 + (TG)n Simple_repeat Simple_repeat 2 41 0 277 200 42 25 chr10 29699695 29699815 -115889473 + (TTATA)n Simple_repeat Simple_repeat 1 122 0 668 132 0 0 chr10 29699832 29699923 -115889365 + AluS SINE Alu 1 91 -221 31 68 0 0 chr10 29699923 29699982 -115889306 + AT_rich Low_complexity Low_complexity 1 59 0 224 130 22 0 chr10 29699988 29700034 -115889254 + (TATAA)n Simple_repeat Simple_repeat 5 51 0 2241 118 3 0 chr10 29700851 29701156 -115888132 + AluSx SINE Alu 1 306 -6 25 31 0 0 chr10 29701210 29701242 -115888046 + AT_rich Low_complexity Low_complexity 1 32 0 884 166 33 13 chr10 29703708 29703859 -115885429 - FRAM SINE Alu -11 155 2 1553 250 150 31 chr10 29704106 29704685 -115884603 + L2 LINE L2 2304 2951 -363 182 143 0 29 chr10 29704751 29704786 -115884502 + L2 LINE L2 2917 2950 -364 963 260 110 31 chr10 29704948 29705302 -115883986 + L2 LINE L2 2916 3297 -16 351 217 74 69 chr10 29705307 29705482 -115883806 + HAL1 LINE L1 2300 2475 -32 253 231 13 26 chr10 29705488 29705566 -115883722 + MER116 DNA Mariner 1 77 -3 384 256 107 48 chr10 29705573 29705862 -115883426 + L1M4 LINE L1 5028 5333 -813 1213 73 0 0 chr10 29706582 29706732 -115882556 + AluSc SINE Alu 156 305 -4 379 310 108 6 chr10 29707129 29707287 -115882001 + MIR SINE MIR 14 187 -75 35 0 0 0 chr10 29708176 29708211 -115881077 + AT_rich Low_complexity Low_complexity 1 35 0 1778 145 48 7 chr10 29710499 29710788 -115878500 - AluSx SINE Alu -11 301 1 533 123 9 26 chr10 29711101 29711215 -115878073 + (TCC)n Simple_repeat Simple_repeat 3 114 0 1121 240 47 8 chr10 29711221 29711357 -115877931 - AluJo SINE Alu -44 268 139 183 80 0 0 chr10 29711357 29711382 -115877906 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 1121 240 47 8 chr10 29711382 29711503 -115877785 - AluJo SINE Alu -173 139 1 700 200 32 0 chr10 29711505 29711630 -115877658 - FLAM_A SINE Alu -4 129 1 526 313 42 17 chr10 29711642 29711882 -115877406 - MIR SINE MIR -15 247 2 2432 96 0 0 chr10 29712258 29712571 -115876717 - AluSq SINE Alu 0 313 1 554 207 179 0 chr10 29713161 29713301 -115875987 + MER5A DNA MER1_type 25 189 0 656 254 53 16 chr10 29713907 29714096 -115875192 + MIR SINE MIR 19 214 -48 433 282 7 35 chr10 29714513 29714703 -115874585 + MLT1E LTR MaLR 1 188 -379 249 83 0 0 chr10 29714730 29714766 -115874522 + (TC)n Simple_repeat Simple_repeat 1 36 0 932 193 29 19 chr10 29714766 29714973 -115874315 - MLT1D LTR MaLR -260 245 37 661 306 177 8 chr10 29715020 29715471 -115873817 + L2 LINE L2 2787 3313 0 1840 78 142 15 chr10 29715548 29715816 -115873472 + AluSx SINE Alu 1 302 -10 251 309 96 51 chr10 29715837 29716170 -115873118 - L2 LINE L2 -879 2435 2088 1107 134 36 62 chr10 29716438 29716475 -115872813 + L1PB4 LINE L1 5937 5973 -183 1142 99 204 0 chr10 29716475 29716666 -115872622 - MER30 DNA MER1_type 0 230 1 1107 134 36 62 chr10 29716666 29716852 -115872436 + L1PB4 LINE L1 5973 6154 -2 530 168 25 17 chr10 29717009 29717128 -115872160 + MLT1D LTR MaLR 1 120 -385 1537 212 13 13 chr10 29717130 29717437 -115871851 + AluJo SINE Alu 5 311 -1 2402 92 3 0 chr10 29717624 29717929 -115871359 + AluSx SINE Alu 1 306 -6 2377 95 3 0 chr10 29718284 29718590 -115870698 - AluSp SINE Alu -6 307 1 278 221 29 48 chr10 29718719 29718823 -115870465 + L1ME1 LINE L1 926 1027 -5092 38 51 0 0 chr10 29718836 29718895 -115870393 + AT_rich Low_complexity Low_complexity 1 59 0 871 172 0 14 chr10 29719006 29719151 -115870137 + FLAM_C SINE Alu 1 143 0 181 143 54 0 chr10 29719254 29719310 -115869978 + (CATATA)n Simple_repeat Simple_repeat 6 64 0 706 305 92 23 chr10 29719406 29719928 -115869360 + L1ME1 LINE L1 3985 4542 -1587 1058 199 13 101 chr10 29719947 29720264 -115869024 - AluJo SINE Alu -12 290 2 278 284 168 39 chr10 29721296 29721581 -115867707 + MLT1D LTR MaLR 124 445 -104 263 325 42 8 chr10 29721878 29721998 -115867290 + MIR SINE MIR 50 173 -89 1867 150 0 7 chr10 29722131 29722467 -115866821 + AluJb SINE Alu 1 334 0 2115 114 0 0 chr10 29722764 29723069 -115866219 + AluSx SINE Alu 1 305 0 29 70 0 0 chr10 29723211 29723268 -115866020 + AT_rich Low_complexity Low_complexity 1 57 0 252 0 0 0 chr10 29723607 29723635 -115865653 + (A)n Simple_repeat Simple_repeat 1 28 0 2202 157 24 19 chr10 29723814 29724234 -115865054 + MSTB2 LTR MaLR 34 455 -2 533 291 80 22 chr10 29724268 29724632 -115864656 + L1ME1 LINE L1 4865 5249 -880 1279 284 67 26 chr10 29724632 29725128 -115864160 - MLT1E2 LTR MaLR 0 626 111 1938 254 51 59 chr10 29725146 29725185 -115864103 + L1ME1 LINE L1 5245 5283 -866 2159 79 10 3 chr10 29725185 29725476 -115863812 - AluY SINE Alu -18 293 1 1938 254 51 59 chr10 29725476 29726338 -115862950 + L1ME1 LINE L1 5283 6139 -10 2347 57 3 20 chr10 29726338 29726634 -115862654 + AluY SINE Alu 13 303 -8 510 289 68 44 chr10 29726673 29726967 -115862321 - L1MEc LINE L1 -4358 2038 1738 23 33 0 0 chr10 29727230 29727260 -115862028 + AT_rich Low_complexity Low_complexity 1 30 0 2354 103 0 0 chr10 29728060 29728360 -115860928 - AluSq SINE Alu -13 300 1 1590 140 76 73 chr10 29728445 29728787 -115860501 - MER2 DNA MER2_type -1 343 1 1722 168 0 26 chr10 29729350 29729653 -115859635 - AluJb SINE Alu -17 295 1 2327 111 0 6 chr10 29730205 29730520 -115858768 - AluSq SINE Alu 0 313 1 212 245 41 20 chr10 29730852 29730901 -115858387 - L3 LINE CR1 -11 1566 1517 436 259 75 14 chr10 29731164 29731311 -115857977 + MIR SINE MIR 102 257 -5 1101 163 0 11 chr10 29731566 29731744 -115857544 + AluSg/x SINE Alu 123 298 -14 350 224 0 9 chr10 29731925 29732032 -115857256 + (TA)n Simple_repeat Simple_repeat 2 107 0 2624 110 36 0 chr10 29732295 29732712 -115856576 - LTR3b LTR ERVK -68 432 1 225 108 0 0 chr10 29732769 29732806 -115856482 + (CA)n Simple_repeat Simple_repeat 2 38 0 389 272 41 14 chr10 29732841 29732988 -115856300 + MIR SINE MIR 110 260 -2 21 0 0 0 chr10 29733073 29733094 -115856194 + AT_rich Low_complexity Low_complexity 1 21 0 2076 130 3 3 chr10 29733485 29733786 -115855502 + AluSx SINE Alu 1 301 -11 1322 151 72 34 chr10 29734710 29735001 -115854287 - THE1C LTR MaLR -73 302 1 2271 65 14 0 chr10 29735660 29735976 -115853312 - AluY SINE Alu 0 320 1 530 364 65 32 chr10 29736244 29736708 -115852580 + L2 LINE L2 340 818 -2496 596 211 65 16 chr10 29736729 29736852 -115852436 + FLAM_C SINE Alu 3 131 -12 330 365 34 24 chr10 29736913 29737121 -115852167 + L2 LINE L2 912 1121 -2193 23 0 0 0 chr10 29738646 29738669 -115850619 + AT_rich Low_complexity Low_complexity 1 23 0 1429 36 0 0 chr10 29738707 29738873 -115850415 + AluY SINE Alu 146 311 0 28 29 0 0 chr10 29739405 29739440 -115849848 + AT_rich Low_complexity Low_complexity 1 35 0 1677 84 0 5 chr10 29740049 29740263 -115849025 + AluSg SINE Alu 1 213 -97 3763 133 46 27 chr10 29741860 29742044 -115847244 + Tigger3b DNA MER2_type 21 200 -2828 1726 121 3 25 chr10 29742044 29742147 -115847141 + AluSg SINE Alu 32 136 -174 2392 31 41 10 chr10 29742147 29742439 -115846849 + AluY SINE Alu 1 301 -10 1726 121 3 25 chr10 29742439 29742617 -115846671 + AluSg SINE Alu 136 307 -3 3763 133 46 27 chr10 29742617 29743109 -115846179 + Tigger3b DNA MER2_type 200 710 -521 1915 155 0 3 chr10 29744045 29744341 -115844947 + AluJo SINE Alu 1 295 -17 226 0 29 29 chr10 29744988 29745023 -115844265 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2143 103 7 7 chr10 29745026 29745318 -115843970 - AluSq SINE Alu -21 292 1 21 0 0 0 chr10 29746071 29746092 -115843196 + AT_rich Low_complexity Low_complexity 1 21 0 1194 284 99 15 chr10 29746925 29747893 -115841395 + L1ME3A LINE L1 5100 6165 -5 209 321 110 28 chr10 29747899 29748117 -115841171 - L2 LINE L2 -81 3232 2997 * 522 288 119 43 chr10 29748102 29748380 -115840908 - L2 LINE L2 -447 2867 2569 597 200 0 9 chr10 29748400 29748510 -115840778 - MER58A DNA MER1_type 0 152 44 2173 114 0 3 chr10 29748557 29748854 -115840434 + AluSg1 SINE Alu 6 301 -8 834 205 6 0 chr10 29748854 29749010 -115840278 + AluJo/FRAM SINE Alu 135 291 -21 27 73 0 0 chr10 29749684 29749739 -115839549 + AT_rich Low_complexity Low_complexity 1 55 0 32 0 0 0 chr10 29751272 29751304 -115837984 + AT_rich Low_complexity Low_complexity 1 32 0 2442 76 0 25 chr10 29752115 29752432 -115836856 + AluY SINE Alu 1 309 -2 23 33 0 0 chr10 29752491 29752521 -115836767 + AT_rich Low_complexity Low_complexity 1 30 0 521 265 27 7 chr10 29752977 29753124 -115836164 + MIR SINE MIR 63 212 -50 2239 115 3 13 chr10 29753127 29753439 -115835849 + AluSx SINE Alu 1 309 -3 407 371 105 3 chr10 29753742 29754055 -115835233 + L1MB8 LINE L1 4821 5165 -981 2074 222 60 22 chr10 29804083 29804663 -115784625 - L1MCa LINE L1 -3655 2771 2215 2018 139 0 25 chr10 29804663 29804979 -115784309 - AluJb SINE Alu -4 308 1 2074 222 60 22 chr10 29804979 29805568 -115783720 - L1MCa LINE L1 -4211 2215 1466 8470 215 55 37 chr10 29806312 29806427 -115782861 + L1MC2 LINE L1 2065 2176 -4448 1510 199 0 25 chr10 29806427 29806744 -115782544 + AluJb SINE Alu 1 309 -3 8470 215 55 37 chr10 29806744 29808585 -115780703 + L1MC2 LINE L1 2176 3982 -2642 1057 153 8 111 chr10 29808585 29808846 -115780442 + MER46A DNA MER2_type 1 234 -2 8470 215 55 37 chr10 29808846 29808987 -115780301 + L1MC2 LINE L1 3982 4119 -2505 1634 134 0 0 chr10 29808987 29809203 -115780085 + AluSx SINE Alu 1 216 -96 245 167 0 0 chr10 29809203 29809245 -115780043 + AluSx SINE Alu 255 296 -6 8470 215 55 37 chr10 29809245 29810354 -115778934 + L1MC2 LINE L1 4119 5206 -1418 2364 83 3 0 chr10 29810354 29810656 -115778632 - AluY SINE Alu -8 303 1 8470 215 55 37 chr10 29810656 29811142 -115778146 + L1MC2 LINE L1 5206 5682 -942 2264 112 0 16 chr10 29811142 29811456 -115777832 - AluSg SINE Alu -1 309 1 8470 215 55 37 chr10 29811456 29812189 -115777099 + L1MC2 LINE L1 5682 6615 -9 3761 169 19 72 chr10 29812191 29813109 -115776179 + L1MB8 LINE L1 5304 6172 -6 382 211 11 0 chr10 29813181 29813276 -115776012 + MER53 DNA DNA 94 189 0 2146 117 3 0 chr10 29813341 29813639 -115775649 + AluSx SINE Alu 1 299 -13 252 338 35 98 chr10 29814009 29814324 -115774964 + L2 LINE L2 2697 2956 -316 2393 106 0 0 chr10 29814324 29814625 -115774663 - AluSx SINE Alu -11 301 1 252 338 35 98 chr10 29814625 29814906 -115774382 + L2 LINE L2 2956 3253 -19 782 119 16 0 chr10 29814939 29815065 -115774223 + L1MA3 LINE L1 6178 6305 0 2065 132 10 10 chr10 29815437 29815748 -115773540 + AluSq SINE Alu 1 311 -2 1697 164 33 27 chr10 29816097 29816427 -115772861 - THE1B LTR MaLR -32 332 1 1168 196 157 16 chr10 29816760 29817015 -115772273 - AluJb SINE Alu -11 291 1 234 0 0 0 chr10 29817022 29817048 -115772240 + (CA)n Simple_repeat Simple_repeat 2 27 0 223 274 55 14 chr10 29817875 29817948 -115771340 - MIR SINE MIR -71 191 116 180 0 0 0 chr10 29820639 29820659 -115768629 + (A)n Simple_repeat Simple_repeat 1 20 0 318 214 119 12 chr10 29821005 29821089 -115768199 + MIR SINE MIR 157 249 -13 735 180 102 90 chr10 29821272 29821303 -115767985 + L1MD2 LINE L1 6101 6130 -229 2282 123 0 0 chr10 29821303 29821604 -115767684 + AluSx SINE Alu 1 301 -11 735 180 102 90 chr10 29821604 29821828 -115767460 + L1MD2 LINE L1 6130 6359 0 199 324 0 14 chr10 29821842 29821916 -115767372 + MIR SINE MIR 170 242 -20 28 29 0 0 chr10 29822106 29822141 -115767147 + AT_rich Low_complexity Low_complexity 1 35 0 263 331 81 69 chr10 29822676 29822936 -115766352 - L2 LINE L2 0 3272 3010 1715 166 134 6 chr10 29822936 29823286 -115766002 + MSTD LTR MaLR 1 395 -1 234 376 68 8 chr10 29823311 29823428 -115765860 - L2 LINE L2 -12 3260 3137 24 67 0 0 chr10 29823750 29823795 -115765493 + AT_rich Low_complexity Low_complexity 1 45 0 1739 157 42 26 chr10 29824557 29824863 -115764425 + AluJo SINE Alu 1 311 -1 464 224 66 28 chr10 29825079 29825293 -115763995 - LTR41 LTR ERVL 0 795 556 895 170 5 27 chr10 29825748 29825936 -115763352 - LTR41 LTR ERVL -589 184 1 2063 153 97 8 chr10 29825974 29826367 -115762921 + MSTA LTR MaLR 1 428 0 354 198 12 0 chr10 29826367 29826453 -115762835 + AluJo SINE Alu 43 129 -173 1056 164 0 12 chr10 29826463 29826628 -115762660 + AluJo SINE Alu 137 299 -3 2418 164 8 53 chr10 29826908 29827406 -115761882 + MLT2B2 LTR ERVL 1 379 -35 412 116 101 0 chr10 29827414 29827483 -115761805 + MADE1 DNA Mariner 5 80 0 1022 170 0 0 chr10 29828245 29828404 -115760884 - FRAM SINE Alu -6 160 2 621 260 65 25 chr10 29828910 29829110 -115760178 - L2 LINE L2 -418 2896 2689 972 158 18 6 chr10 29829110 29829274 -115760014 + AluJ SINE Alu 136 301 -11 1743 290 174 12 chr10 29829282 29830082 -115759206 - L2 LINE L2 -612 2702 1774 1366 199 8 8 chr10 29830090 29830346 -115758942 - AluJo SINE Alu -20 292 37 598 247 145 49 chr10 29830349 29830653 -115758635 - L2 LINE L2 -1659 1655 1323 2160 111 14 10 chr10 29830655 29830952 -115758336 + AluSg SINE Alu 1 298 -12 189 0 0 0 chr10 29830952 29830973 -115758315 + (GA)n Simple_repeat Simple_repeat 2 22 0 3251 153 20 79 chr10 29831737 29832471 -115756817 + LTR8 LTR ERV1 1 691 0 283 293 105 23 chr10 29832643 29832776 -115756512 - L2 LINE L2 -259 3054 2911 501 292 146 0 chr10 29832789 29832967 -115756321 + MIR SINE MIR 24 227 -35 723 164 0 45 chr10 29833232 29833366 -115755922 + AluJo SINE Alu 1 128 -174 601 143 10 0 chr10 29833366 29833464 -115755824 + AluJo SINE Alu 190 288 -24 2160 130 7 0 chr10 29834391 29834699 -115754589 + AluSx SINE Alu 3 312 0 21 0 0 0 chr10 29835919 29835940 -115753348 + AT_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr10 29836927 29836955 -115752333 + AT_rich Low_complexity Low_complexity 1 28 0 1752 143 50 17 chr10 29839358 29839658 -115749630 + AluJb SINE Alu 1 310 -2 2354 68 10 0 chr10 29839716 29840008 -115749280 + AluY SINE Alu 1 295 -16 1610 82 0 5 chr10 29840079 29840287 -115749001 + AluSg/x SINE Alu 87 293 -19 2186 103 38 0 chr10 29841056 29841347 -115747941 + AluSx SINE Alu 1 302 -10 37 23 0 0 chr10 29842001 29842045 -115747243 + AT_rich Low_complexity Low_complexity 1 44 0 1819 209 32 4 chr10 29842232 29842962 -115746326 + L1MB4 LINE L1 4907 5649 -531 2360 188 4 31 chr10 29843027 29843400 -115745888 + L1MB4 LINE L1 5643 5998 -182 2113 108 24 0 chr10 29843400 29843688 -115745600 - AluSx SINE Alu -17 295 1 2360 188 4 31 chr10 29843688 29843867 -115745421 + L1MB4 LINE L1 5998 6180 0 5297 90 0 6 chr10 29844450 29845162 -115744126 - L1PA10 LINE L1 -5 6163 5456 2373 98 16 0 chr10 29845626 29845933 -115743355 + AluSx SINE Alu 1 312 0 406 277 59 63 chr10 29845952 29846644 -115742644 + L1MC/D LINE L1 921 1654 -4656 2620 55 0 0 chr10 29846750 29847058 -115742230 + AluY SINE Alu 1 308 -3 647 300 112 47 chr10 29847111 29847618 -115741670 + L1MC/D LINE L1 1832 2371 -3939 2092 102 3 11 chr10 29847674 29847986 -115741302 + AluSx SINE Alu 1 310 0 1417 289 128 20 chr10 29847986 29849209 -115740079 + L1MC/D LINE L1 2475 3829 -2300 1700 151 32 21 chr10 29849215 29849494 -115739794 + AluJo SINE Alu 1 282 -30 297 0 0 0 chr10 29849499 29849532 -115739756 + (CA)n Simple_repeat Simple_repeat 2 34 0 576 232 141 9 chr10 29849554 29849774 -115739514 + MER69 DNA AcHobo 2178 2426 -100 1496 151 94 39 chr10 29850235 29850566 -115738722 + L1MC3 LINE L1 6343 6691 -1094 2403 63 0 35 chr10 29850566 29850884 -115738404 + AluY SINE Alu 1 307 -4 847 152 7 21 chr10 29850895 29851040 -115738248 + FLAM_C SINE Alu 1 143 0 212 216 34 11 chr10 29851040 29851128 -115738160 + GA-rich Low_complexity Low_complexity 2 91 0 192 125 0 0 chr10 29851122 29851154 -115738134 + (CGAAA)n Simple_repeat Simple_repeat 2 33 0 * 4623 180 38 31 chr10 29851154 29851928 -115737360 + L1MC3 LINE L1 6675 7460 -325 1750 156 11 4 chr10 29851928 29852246 -115737042 - AluJb SINE Alu 0 323 4 4623 180 38 31 chr10 29852246 29852553 -115736735 + L1MC3 LINE L1 7460 7764 -21 311 284 137 66 chr10 29852580 29852851 -115736437 + L1MC/D LINE L1 4769 5058 -1071 356 301 126 15 chr10 29853057 29853326 -115735962 + L1MC/D LINE L1 5267 5565 -2226 2154 118 0 6 chr10 29856273 29856587 -115732701 - AluSx SINE Alu 0 312 1 506 327 161 0 chr10 29856868 29857091 -115732197 + MIR SINE MIR 2 260 -2 182 203 0 17 chr10 29858055 29858114 -115731174 + (TATG)n Simple_repeat Simple_repeat 3 60 0 4116 182 93 93 chr10 29859694 29861148 -115728140 + Charlie1a DNA MER1_type 1 1454 -1 445 205 40 3 chr10 29861158 29861308 -115727980 - MER58B DNA MER1_type 0 341 30 295 333 29 9 chr10 29862613 29862718 -115726570 + MIR SINE MIR 1 107 -155 596 90 0 0 chr10 29862802 29862880 -115726408 - AluSp/q SINE Alu -19 294 217 2620 232 72 8 chr10 29862880 29863708 -115725580 + L1M4c LINE L1 974 1854 -4530 933 188 38 61 chr10 29863749 29864010 -115725278 - THE1B LTR MaLR -109 255 1 427 248 198 13 chr10 29864036 29864193 -115725095 + MLT1I LTR MaLR 224 409 0 1654 181 49 0 chr10 29865774 29866100 -115723188 + MER7A DNA MER2_type 6 345 -1 419 198 28 38 chr10 29866114 29866220 -115723068 + L2 LINE L2 3209 3313 0 35 0 0 0 chr10 29866268 29866303 -115722985 + AT_rich Low_complexity Low_complexity 1 35 0 2055 109 14 0 chr10 29866447 29866722 -115722566 + AluSx SINE Alu 1 279 -33 352 309 70 5 chr10 29867320 29867521 -115721767 + L1MC4 LINE L1 7814 8027 -15 2062 122 11 0 chr10 29868323 29868635 -115720653 + AluSx SINE Alu 1 315 0 703 175 0 17 chr10 29868916 29869036 -115720252 + FLAM_A SINE Alu 1 118 -15 2051 120 0 27 chr10 29870045 29870346 -115718942 - AluSg SINE Alu -17 293 1 2208 128 0 0 chr10 29870854 29871166 -115718122 + AluSx SINE Alu 1 312 0 1970 95 19 4 chr10 29872287 29872550 -115716738 - AluSx SINE Alu -45 267 1 2057 120 34 0 chr10 29872554 29872845 -115716443 - AluSg SINE Alu -9 301 1 332 284 34 40 chr10 29873550 29873698 -115715590 + L1MC/D LINE L1 5620 5766 -2042 201 325 231 26 chr10 29873960 29874077 -115715211 + L2 LINE L2 3132 3272 0 2947 17 0 6 chr10 29874552 29874899 -115714389 + L1PA2 LINE L1 5811 6155 0 216 0 0 0 chr10 29875523 29875547 -115713741 + (TA)n Simple_repeat Simple_repeat 1 24 0 2210 120 0 0 chr10 29875549 29875840 -115713448 - AluSx SINE Alu -21 291 1 28 0 0 0 chr10 29875840 29875868 -115713420 + AT_rich Low_complexity Low_complexity 1 28 0 213 348 241 0 chr10 29875909 29876021 -115713267 - L2 LINE L2 -8 3264 3126 1860 144 7 26 chr10 29876437 29876742 -115712546 + AluSx SINE Alu 1 299 -13 1767 158 0 14 chr10 29876837 29877121 -115712167 + AluJb SINE Alu 1 280 -32 2185 125 13 0 chr10 29877632 29877935 -115711353 + AluSx SINE Alu 1 307 -5 772 140 0 9 chr10 29878904 29879018 -115710270 + AluJo/FLAM SINE Alu 1 113 -199 2239 88 3 3 chr10 29879020 29879326 -115709962 + AluSx SINE Alu 13 318 0 825 40 0 0 chr10 29879326 29879427 -115709861 + (TA)n Simple_repeat Simple_repeat 1 101 0 804 87 0 0 chr10 29879440 29879544 -115709744 - AluSc SINE Alu -205 104 1 2209 120 0 0 chr10 29879922 29880231 -115709057 + AluSx SINE Alu 1 309 -3 1700 156 29 7 chr10 29881163 29881439 -115707849 + AluJo SINE Alu 1 282 -30 29 0 0 0 chr10 29881722 29881751 -115707537 + AT_rich Low_complexity Low_complexity 1 29 0 250 238 71 24 chr10 29882017 29882101 -115707187 - L2 LINE L2 -1288 2026 1939 1822 174 0 0 chr10 29882426 29882707 -115706581 + AluJb SINE Alu 2 282 -30 1974 109 29 0 chr10 29883109 29883408 -115705880 - AluSx SINE Alu 0 307 1 213 282 155 0 chr10 29883428 29883499 -115705789 - MIR SINE MIR -150 112 31 859 120 0 8 chr10 29883618 29883743 -115705545 + FRAM SINE Alu 47 170 -6 236 341 90 78 chr10 29883802 29884057 -115705231 + L2 LINE L2 3004 3261 -11 845 249 61 9 chr10 29884207 29884420 -115704868 + MER58A DNA MER1_type 1 224 0 514 270 66 135 chr10 29884434 29884617 -115704671 - L2 LINE L2 0 3313 3119 1258 128 66 26 chr10 29884617 29884844 -115704444 + MER46A DNA MER2_type 1 236 0 514 270 66 135 chr10 29884844 29884903 -115704385 - L2 LINE L2 -194 3119 3058 1611 186 3 10 chr10 29884903 29885193 -115704095 + AluJb SINE Alu 1 288 -24 207 0 0 0 chr10 29885196 29885219 -115704069 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 514 270 66 135 chr10 29885219 29885562 -115703726 - L2 LINE L2 -257 3056 2769 2190 117 0 10 chr10 29885599 29885899 -115703389 + AluSx SINE Alu 1 297 -15 1319 93 0 0 chr10 29885920 29886092 -115703196 + AluY SINE Alu 134 305 -6 1770 138 4 14 chr10 29886663 29886939 -115702349 - AluJo SINE Alu -1 311 39 204 192 0 58 chr10 29887537 29887555 -115701733 + G-rich Low_complexity Low_complexity 6 23 -31 728 181 8 0 chr10 29887555 29887682 -115701606 + FLAM_A SINE Alu 1 128 -5 204 192 0 58 chr10 29887682 29887715 -115701573 + G-rich Low_complexity Low_complexity 23 54 0 2242 103 0 7 chr10 29888843 29889143 -115700145 + AluSc SINE Alu 1 298 -11 399 187 44 0 chr10 29889451 29889542 -115699746 + L1ME3A LINE L1 6064 6158 -12 2302 106 3 3 chr10 29890055 29890367 -115698921 - AluSx SINE Alu 0 312 1 848 264 24 0 chr10 29891000 29891212 -115698076 + AluJo SINE Alu 4 220 -92 2547 59 10 0 chr10 29891243 29891548 -115697740 - AluY SINE Alu -3 308 1 21 36 0 0 chr10 29891548 29891576 -115697712 + AT_rich Low_complexity Low_complexity 1 28 0 629 316 65 37 chr10 29892264 29892556 -115696732 + L2 LINE L2 2227 2534 -780 2234 117 0 0 chr10 29892556 29892856 -115696432 - AluSx SINE Alu -12 300 1 629 316 65 37 chr10 29892856 29892965 -115696323 + L2 LINE L2 2534 2639 -675 2548 70 0 0 chr10 29893180 29893480 -115695808 - AluSx SINE Alu -12 300 1 218 212 59 119 chr10 29894009 29894060 -115695228 - MIR SINE MIR -32 230 178 1630 167 36 14 chr10 29894060 29894336 -115694952 + AluJb SINE Alu 1 282 -30 180 0 0 0 chr10 29894338 29894358 -115694930 + (CAAT)n Simple_repeat Simple_repeat 2 21 0 218 212 59 119 chr10 29894358 29894421 -115694867 - MIR SINE MIR -85 177 120 1405 87 12 127 chr10 29894421 29894673 -115694615 + MER30 DNA MER1_type 8 230 0 21 36 0 0 chr10 29895196 29895224 -115694064 + AT_rich Low_complexity Low_complexity 1 28 0 1932 109 87 0 chr10 29896596 29896872 -115692416 + AluSx SINE Alu 1 300 -12 1872 173 56 0 chr10 29897373 29897697 -115691591 + MER2 DNA MER2_type 1 342 -2 2161 128 0 28 chr10 29898218 29898538 -115690750 - AluSx SINE Alu -1 311 1 804 302 20 8 chr10 29898774 29899022 -115690266 - MIR SINE MIR 0 262 12 447 304 99 31 chr10 29900421 29900612 -115688676 + MIR SINE MIR 47 250 -12 1214 105 0 0 chr10 29900669 29900831 -115688457 - AluSg/x SINE Alu -17 295 134 1155 100 0 0 chr10 29900831 29900981 -115688307 - Ricksha DNA DNA -1203 2043 1894 1648 142 0 0 chr10 29900981 29901221 -115688067 - AluSx SINE Alu -13 299 60 706 167 167 37 chr10 29901258 29901474 -115687814 - LTR65 LTR ERV1 -244 425 182 1264 139 0 0 chr10 29901605 29901785 -115687503 - FRAM SINE Alu -1 175 1 401 89 59 15 chr10 29903635 29903770 -115685518 + (TCTA)n Simple_repeat Simple_repeat 1 141 0 1583 196 11 0 chr10 29903770 29904045 -115685243 - AluJo SINE Alu -25 287 10 284 337 106 39 chr10 29905102 29905545 -115683743 + L2 LINE L2 2771 3240 -32 1857 89 12 0 chr10 29907558 29907804 -115681484 - AluY SINE Alu -62 249 1 21 36 0 0 chr10 29907804 29907832 -115681456 + AT_rich Low_complexity Low_complexity 1 28 0 629 316 65 37 chr10 29908520 29908812 -115680476 + L2 LINE L2 2227 2534 -780 2234 117 0 0 chr10 29908812 29909112 -115680176 - AluSx SINE Alu -12 300 1 629 316 65 37 chr10 29909112 29909221 -115680067 + L2 LINE L2 2534 2639 -675 2548 70 0 0 chr10 29909436 29909736 -115679552 - AluSx SINE Alu -12 300 1 218 212 59 119 chr10 29910265 29910316 -115678972 - MIR SINE MIR -32 230 178 1630 167 36 14 chr10 29910316 29910592 -115678696 + AluJb SINE Alu 1 282 -30 180 0 0 0 chr10 29910594 29910614 -115678674 + (CAAT)n Simple_repeat Simple_repeat 2 21 0 218 212 59 119 chr10 29910614 29910677 -115678611 - MIR SINE MIR -85 177 120 1405 87 12 127 chr10 29910677 29910929 -115678359 + MER30 DNA MER1_type 8 230 0 21 36 0 0 chr10 29911452 29911480 -115677808 + AT_rich Low_complexity Low_complexity 1 28 0 1932 109 87 0 chr10 29912852 29913128 -115676160 + AluSx SINE Alu 1 300 -12 1872 173 56 0 chr10 29913629 29913953 -115675335 + MER2 DNA MER2_type 1 342 -2 2161 128 0 28 chr10 29914474 29914794 -115674494 - AluSx SINE Alu -1 311 1 804 302 20 8 chr10 29915030 29915278 -115674010 - MIR SINE MIR 0 262 12 447 304 99 31 chr10 29916677 29916868 -115672420 + MIR SINE MIR 47 250 -12 2278 102 0 0 chr10 29916925 29917220 -115672068 - AluSx SINE Alu -17 295 1 1107 193 72 77 chr10 29918512 29918595 -115670693 + L1MC5 LINE L1 6984 7066 -895 2251 102 3 3 chr10 29918595 29918890 -115670398 - AluSp SINE Alu -18 295 1 1107 193 72 77 chr10 29918890 29919210 -115670078 + L1MC5 LINE L1 7066 7385 -576 21 0 0 0 chr10 29919251 29919272 -115670016 + AT_rich Low_complexity Low_complexity 1 21 0 2347 99 0 6 chr10 29919469 29919781 -115669507 + AluY SINE Alu 2 311 0 2672 221 38 32 chr10 29919977 29920669 -115668619 + Charlie1a DNA MER1_type 1 696 -759 783 113 20 67 chr10 29920677 29920827 -115668461 + L1MA10 LINE L1 6090 6232 -102 535 183 250 12 chr10 29920837 29921001 -115668287 - Charlie1 DNA MER1_type -497 2264 2062 587 133 0 0 chr10 29921007 29921097 -115668191 + L1MA10 LINE L1 6235 6324 -10 3075 170 92 27 chr10 29921106 29921649 -115667639 + Charlie1 DNA MER1_type 2007 2608 -153 2018 148 0 3 chr10 29921649 29921946 -115667342 - AluJb SINE Alu -16 296 1 3075 170 92 27 chr10 29921946 29922109 -115667179 + Charlie1 DNA MER1_type 2608 2759 -2 2306 101 0 3 chr10 29922423 29922720 -115666568 + AluSx SINE Alu 1 296 -16 319 278 189 39 chr10 29923012 29923192 -115666096 - L2 LINE L2 -516 2798 2592 1909 173 0 0 chr10 29923223 29923524 -115665764 - AluSx SINE Alu -11 301 1 281 247 86 74 chr10 29923700 29923862 -115665426 - L1MC5 LINE L1 -30 7931 7768 2170 123 0 3 chr10 29923877 29924178 -115665110 - AluSq SINE Alu -13 300 1 1928 117 3 27 chr10 29924729 29925029 -115664259 + AluSx SINE Alu 1 293 -19 3845 123 116 9 chr10 29925036 29925720 -115663568 + Tigger3(Golem) DNA MER2_type 2273 3029 0 475 263 53 29 chr10 29925909 29926080 -115663208 - MER5B DNA MER1_type -1 177 3 230 258 19 126 chr10 29926696 29926855 -115662433 + L1ME LINE L1 5378 5519 -643 367 301 123 21 chr10 29927111 29927347 -115661941 - L2 LINE L2 -5 3308 3049 1876 80 52 52 chr10 29927431 29927720 -115661568 + AluY SINE Alu 1 289 -22 593 230 182 10 chr10 29928156 29928365 -115660923 - MIR SINE MIR -10 252 8 673 261 11 27 chr10 29928375 29928559 -115660729 + MER5A DNA MER1_type 9 189 0 14895 125 41 6 chr10 29930485 29930822 -115658466 - Tigger1 DNA MER2_type -1 2417 2093 2178 114 3 3 chr10 29930822 29931120 -115658168 + AluSx SINE Alu 1 298 -14 14895 125 41 6 chr10 29931120 29933084 -115656204 - Tigger1 DNA MER2_type -325 2093 34 2489 57 0 7 chr10 29933172 29933472 -115655816 - AluY SINE Alu -13 298 1 2001 105 41 27 chr10 29934075 29934370 -115654918 + AluSx SINE Alu 1 299 -13 23 0 0 0 chr10 29935976 29935999 -115653289 + GC_rich Low_complexity Low_complexity 1 23 0 379 255 116 107 chr10 29936071 29936503 -115652785 + L1M2 LINE L1 478 1226 -5623 284 337 106 39 chr10 29938283 29938726 -115650562 - L2 LINE L2 -32 3240 2771 1583 196 11 0 chr10 29939783 29940058 -115649230 + AluJo SINE Alu 10 287 -25 401 89 59 15 chr10 29940058 29940193 -115649095 + (TAGA)n Simple_repeat Simple_repeat 1 141 0 1264 139 0 0 chr10 29942043 29942223 -115647065 + FRAM SINE Alu 1 175 -1 1099 194 144 92 chr10 29942354 29942607 -115646681 + LTR65 LTR ERV1 182 420 -249 1868 97 0 0 chr10 29942607 29942845 -115646443 + AluSx SINE Alu 60 297 -15 1099 194 144 92 chr10 29942845 29943049 -115646239 + LTR65 LTR ERV1 420 663 -6 2169 169 61 17 chr10 29943064 29943407 -115645881 + MSTB LTR MaLR 1 366 -60 2388 96 0 0 chr10 29943407 29943709 -115645579 - AluSx SINE Alu -10 302 1 2169 169 61 17 chr10 29943709 29943773 -115645515 + MSTB LTR MaLR 366 426 0 557 90 0 13 chr10 29944265 29944343 -115644945 - MADE1 DNA Mariner -3 77 1 275 320 100 0 chr10 29944394 29944494 -115644794 + L2 LINE L2 3154 3263 -9 845 170 7 0 chr10 29945008 29945143 -115644145 + AluJo SINE Alu 1 136 -176 273 29 0 0 chr10 29945167 29945201 -115644087 + (CA)n Simple_repeat Simple_repeat 2 35 0 413 161 138 11 chr10 29945387 29945474 -115643814 - LTR12 LTR ERV1 0 714 617 287 218 69 0 chr10 29945474 29945561 -115643727 - LTR30 LTR ERV1 -70 652 560 333 193 72 12 chr10 29945562 29945645 -115643643 - LTR12 LTR ERV1 -422 292 205 1268 126 42 59 chr10 29945684 29945922 -115643366 - LTR12 LTR ERV1 -480 234 1 2197 127 0 9 chr10 29946633 29946948 -115642340 + AluSx SINE Alu 1 312 0 1767 154 3 40 chr10 29947108 29947407 -115641881 - AluJb SINE Alu -23 289 2 502 186 24 89 chr10 29947567 29947691 -115641597 - L2 LINE L2 -2 3270 3155 303 175 35 0 chr10 29948169 29948226 -115641062 + MER102a DNA MER1_type 53 111 -219 1682 190 13 10 chr10 29948268 29948579 -115640709 + AluJo SINE Alu 1 312 0 848 141 5 32 chr10 29948593 29948778 -115640510 + GA-rich Low_complexity Low_complexity 1 180 0 290 265 43 43 chr10 29948799 29948961 -115640327 + MER102a DNA MER1_type 169 330 0 332 98 39 0 chr10 29949049 29949100 -115640188 + L1MC3 LINE L1 7045 7097 -688 275 259 24 0 chr10 29949101 29949186 -115640102 + MLT1F1 LTR MaLR 36 122 -445 2701 161 89 47 chr10 29949188 29949557 -115639731 + L1MC3 LINE L1 7187 7590 -195 2276 113 7 0 chr10 29949557 29949866 -115639422 + AluSx SINE Alu 1 311 -1 2701 161 89 47 chr10 29949866 29950068 -115639220 + L1MC3 LINE L1 7590 7782 -3 1727 177 0 23 chr10 29950639 29950944 -115638344 + AluJo SINE Alu 1 298 -14 326 243 14 0 chr10 29951200 29951270 -115638018 - MER91B DNA MER1_type -26 164 94 524 180 72 18 chr10 29951291 29951402 -115637886 - MER91B DNA MER1_type -60 130 14 396 286 21 7 chr10 29951600 29951740 -115637548 + MIR SINE MIR 121 262 0 2027 148 3 3 chr10 29951797 29952100 -115637188 + AluSx SINE Alu 1 303 -9 2527 108 129 5 chr10 29952379 29952760 -115636528 - MSTA LTR MaLR 0 428 1 1067 123 0 7 chr10 29952793 29952939 -115636349 + AluJo SINE Alu 6 150 -162 1616 156 76 4 chr10 29953087 29953363 -115635925 + AluSx SINE Alu 1 296 -16 30 0 0 0 chr10 29953880 29953910 -115635378 + AT_rich Low_complexity Low_complexity 1 30 0 514 316 47 26 chr10 29954757 29954947 -115634341 - MIR SINE MIR -62 200 7 2180 107 3 3 chr10 29954980 29955269 -115634019 - AluSx SINE Alu -11 301 13 378 0 0 0 chr10 29955344 29955386 -115633902 + (TG)n Simple_repeat Simple_repeat 2 43 0 188 33 0 33 chr10 29955772 29955802 -115633486 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 1567 190 7 10 chr10 29956288 29956400 -115632888 + AluJo SINE Alu 22 133 -179 2418 74 3 0 chr10 29956400 29956699 -115632589 + AluY SINE Alu 1 300 -11 1567 190 7 10 chr10 29956699 29956875 -115632413 + AluJo SINE Alu 133 309 -3 748 209 0 0 chr10 29956958 29957087 -115632201 + FLAM_C SINE Alu 1 129 -4 457 264 40 0 chr10 29957274 29957399 -115631889 - L2 LINE L2 -7 3306 3177 1917 178 26 6 chr10 29957461 29957804 -115631484 + MLT1A1 LTR MaLR 16 365 0 189 195 0 49 chr10 29957826 29957867 -115631421 - MIR SINE MIR -26 236 198 803 274 83 0 chr10 29957874 29958126 -115631162 - Charlie4a DNA MER1_type 0 508 236 603 211 89 83 chr10 29958197 29958349 -115630939 - MIR SINE MIR -73 189 34 1491 173 0 4 chr10 29958349 29958580 -115630708 - AluJb SINE Alu -77 235 6 603 211 89 83 chr10 29958580 29958607 -115630681 - MIR SINE MIR -228 34 9 1818 150 0 56 chr10 29958760 29958877 -115630411 + AluJo SINE Alu 1 123 -189 2258 123 0 0 chr10 29958877 29959185 -115630103 - AluSx SINE Alu -4 308 1 1818 150 0 56 chr10 29959185 29959387 -115629901 + AluJo SINE Alu 123 302 -10 21 0 0 0 chr10 29960961 29960982 -115628306 + AT_rich Low_complexity Low_complexity 1 21 0 2336 60 0 11 chr10 29962745 29963030 -115626258 + AluY SINE Alu 18 299 -12 312 255 81 36 chr10 29963503 29963629 -115625659 + L1ME LINE L1 1 131 -5939 484 200 24 0 chr10 29963630 29963715 -115625573 + FAM SINE Alu 1 78 -98 366 247 11 34 chr10 29963747 29963836 -115625452 + FAM SINE Alu 81 167 -8 1643 203 0 19 chr10 29964022 29964338 -115624950 - AluJo SINE Alu -2 310 1 540 283 112 0 chr10 29964366 29964553 -115624735 + L2 LINE L2 3105 3312 -1 1960 149 7 0 chr10 29964947 29965252 -115624036 - AluSx SINE Alu 0 307 1 381 43 0 0 chr10 29965617 29965664 -115623624 + (TG)n Simple_repeat Simple_repeat 2 48 0 244 236 211 62 chr10 29965951 29966059 -115623229 - MIR SINE MIR -1 261 170 1943 159 0 3 chr10 29966059 29966348 -115622940 - AluJo SINE Alu -24 288 1 244 236 211 62 chr10 29966348 29966447 -115622841 - MIR SINE MIR -92 170 23 2241 98 7 10 chr10 29966523 29966830 -115622458 - AluSq SINE Alu -7 306 1 2185 114 0 26 chr10 29967296 29967603 -115621685 + AluSx SINE Alu 1 299 -13 1369 236 54 22 chr10 29968243 29968611 -115620677 - MLT1F LTR MaLR 0 542 163 837 29 0 29 chr10 29968613 29968716 -115620572 - AluY SINE Alu -15 296 197 535 243 181 7 chr10 29968716 29968860 -115620428 - MLT1F LTR MaLR -371 171 3 325 306 52 17 chr10 29968932 29969105 -115620183 + L1ME LINE L1 2843 3021 -3059 987 187 6 12 chr10 29969114 29969280 -115620008 + FRAM SINE Alu 1 165 -1 1848 87 0 90 chr10 29969281 29969569 -115619719 - AluY SINE Alu -49 262 1 253 242 11 33 chr10 29969623 29969714 -115619574 + L1ME LINE L1 3136 3224 -2856 1051 163 0 11 chr10 29969748 29969926 -115619362 + FRAM SINE Alu 1 176 0 1192 110 0 0 chr10 29970008 29970171 -115619117 + AluSg/x SINE Alu 144 306 -6 432 0 0 0 chr10 29970209 29970257 -115619031 + (CA)n Simple_repeat Simple_repeat 1 48 0 370 222 118 52 chr10 29970322 29970457 -115618831 - L2 LINE L2 0 3313 3170 1985 88 22 18 chr10 29970468 29970740 -115618548 - AluSc SINE Alu -10 299 27 209 145 87 0 chr10 29970796 29970865 -115618423 + GA-rich Low_complexity Low_complexity 2 76 0 2109 120 3 13 chr10 29971507 29971815 -115617473 + AluSx SINE Alu 1 305 -7 1259 221 0 41 chr10 29972446 29972740 -115616548 - AluJo SINE Alu 0 312 31 2075 120 0 23 chr10 29973293 29973592 -115615696 + AluSx SINE Alu 1 292 -20 24 0 0 0 chr10 29973592 29973616 -115615672 + AT_rich Low_complexity Low_complexity 1 24 0 446 295 52 80 chr10 29974445 29974696 -115614592 + L1ME LINE L1 3637 3880 -2200 10151 163 24 1 chr10 29974923 29977416 -115611872 - L1PA13 LINE L1 -11 6152 3607 617 253 84 69 chr10 29977477 29977679 -115611609 + MLT1G1 LTR MaLR 150 392 -176 231 223 75 53 chr10 29977704 29977798 -115611490 + MLT1H LTR MaLR 456 595 0 901 221 22 40 chr10 29977918 29978144 -115611144 - MER58A DNA MER1_type -1 223 2 1022 281 113 73 chr10 29978196 29978556 -115610732 - L2 LINE L2 -821 2493 2149 2646 157 19 32 chr10 29978556 29978988 -115610300 + MSTB LTR MaLR 1 426 0 1022 281 113 73 chr10 29978988 29979315 -115609973 - L2 LINE L2 -1165 2149 1778 282 304 94 12 chr10 29979532 29979703 -115609585 + L1ME LINE L1 3940 4124 -1956 919 187 8 92 chr10 29979766 29980017 -115609271 + MER63C DNA MER1_type 255 484 -446 407 159 14 0 chr10 29980018 29980087 -115609201 - MSTB2 LTR MaLR 0 457 388 1668 162 0 18 chr10 29980087 29980359 -115608929 + AluJb SINE Alu 1 267 -45 904 104 35 12 chr10 29980361 29980534 -115608754 + GA-rich Low_complexity Low_complexity 4 180 0 182 171 24 0 chr10 29980559 29980600 -115608688 + A-rich Low_complexity Low_complexity 3 44 0 2158 144 83 19 chr10 29980604 29980978 -115608310 - MSTB2 LTR MaLR -57 400 3 1934 167 8 25 chr10 29980979 29981344 -115607944 + MER63C DNA MER1_type 480 838 -92 612 209 31 31 chr10 29981346 29981509 -115607779 + MER63C DNA MER1_type 768 930 0 27 0 0 0 chr10 29981709 29981736 -115607552 + AT_rich Low_complexity Low_complexity 1 27 0 622 205 42 18 chr10 29981749 29981915 -115607373 + L1ME LINE L1 4424 4593 -1487 2136 93 0 0 chr10 29982403 29982671 -115606617 - AluSc SINE Alu -41 268 1 372 251 104 27 chr10 29982681 29982868 -115606420 + L1ME LINE L1 5080 5251 -847 997 209 104 14 chr10 29982868 29983165 -115606123 - MER33 DNA MER1_type 0 324 1 372 251 104 27 chr10 29983165 29983296 -115605992 + L1ME LINE L1 5251 5423 -675 1180 210 0 5 chr10 29983360 29983579 -115605709 + AluJb SINE Alu 87 304 -8 200 239 22 0 chr10 29983583 29983629 -115605659 + GA-rich Low_complexity Low_complexity 2 48 0 2327 83 0 32 chr10 29984151 29984463 -115604825 - AluY SINE Alu -9 302 1 1013 268 40 43 chr10 29984840 29985213 -115604075 - MER110 LTR ERV1 -15 476 105 2033 140 0 10 chr10 29985503 29985811 -115603477 + AluSx SINE Alu 5 309 -3 229 270 110 0 chr10 29985839 29985939 -115603349 + MLT1L LTR MaLR 487 597 -18 397 336 55 23 chr10 29986021 29986241 -115603047 - L2 LINE L2 -480 2834 2608 404 283 20 0 chr10 29986295 29986394 -115602894 - L2 LINE L2 0 3313 3213 199 200 0 44 chr10 29986494 29986539 -115602749 - MIR SINE MIR -103 159 117 839 182 0 0 chr10 29986555 29986687 -115602601 + FLAM_A SINE Alu 1 132 -1 1884 146 9 19 chr10 29986889 29987204 -115602084 - AluJo SINE Alu 0 312 1 2839 98 3 11 chr10 29987425 29987792 -115601496 - THE1B LTR MaLR 0 364 1 763 306 41 18 chr10 29987854 29988194 -115601094 + L2 LINE L2 2862 3209 -104 1867 167 0 10 chr10 29988510 29988810 -115600478 - AluSx SINE Alu -15 297 1 228 83 62 0 chr10 29989129 29989177 -115600111 + (TA)n Simple_repeat Simple_repeat 2 52 0 195 214 45 79 chr10 29989186 29989275 -115600013 + L2 LINE L2 2211 2296 -1018 355 329 7 0 chr10 29989564 29989701 -115599587 + LTR67 LTR ERVL 418 555 -2 1717 161 68 7 chr10 29989754 29990046 -115599242 + AluJo SINE Alu 1 310 -2 2462 35 6 41 chr10 29990158 29990472 -115598816 - AluY SINE Alu -8 303 1 1860 156 13 3 chr10 29990769 29991077 -115598211 - AluJb SINE Alu 0 312 2 2592 53 0 0 chr10 29991190 29991494 -115597794 - AluY SINE Alu -7 304 1 2302 109 3 0 chr10 29991937 29992248 -115597040 + AluSx SINE Alu 1 312 0 181 191 0 85 chr10 29992262 29992309 -115596979 + MER5A DNA MER1_type 43 85 -104 1461 181 0 15 chr10 29992714 29992979 -115596309 + AluJo SINE Alu 44 304 -8 567 0 0 0 chr10 29992980 29993043 -115596245 + (GGAAA)n Simple_repeat Simple_repeat 1 63 0 2126 123 0 0 chr10 29993092 29993430 -115595858 - AluSx SINE Alu 0 338 1 1308 195 13 42 chr10 29994614 29994779 -115594509 + L1ME1 LINE L1 5276 5444 -722 1930 101 7 61 chr10 29994779 29994925 -115594363 + AluSg SINE Alu 1 153 -159 2833 3 0 0 chr10 29994925 29995223 -115594065 + AluYa5 SINE Alu 1 298 -13 1930 101 7 61 chr10 29995223 29995404 -115593884 + AluSg SINE Alu 153 312 0 2438 56 3 37 chr10 29995407 29995729 -115593559 + AluY SINE Alu 1 311 0 1308 195 13 42 chr10 29995729 29995866 -115593422 + L1ME1 LINE L1 5446 5574 -592 1158 219 40 92 chr10 29995869 29996348 -115592940 + L1ME1 LINE L1 5685 6301 -33 1568 176 16 38 chr10 29996374 29996693 -115592595 - AluJo SINE Alu 0 312 1 1459 90 30 5 chr10 29997463 29997663 -115591625 + AluSc SINE Alu 96 300 -9 186 43 0 0 chr10 29997666 29997689 -115591599 + (GGA)n Simple_repeat Simple_repeat 3 25 0 1503 170 28 60 chr10 29997765 29998082 -115591206 + AluJo SINE Alu 1 307 -5 28 0 0 0 chr10 29998360 29998388 -115590900 + AT_rich Low_complexity Low_complexity 1 28 0 2174 122 0 0 chr10 29998394 29998682 -115590606 - AluSx SINE Alu -24 288 1 263 320 7 34 chr10 29998922 29999069 -115590219 + GA-rich Low_complexity Low_complexity 6 148 0 3919 147 6 14 chr10 29999121 29999768 -115589520 - LTR48B LTR ERV1 -2 642 1 539 205 34 0 chr10 29999867 29999984 -115589304 + L1PB4 LINE L1 6033 6153 -3 1981 169 0 0 chr10 29999992 30000294 -115588994 + AluJb SINE Alu 1 302 -10 1547 166 63 0 chr10 30000937 30001221 -115588067 - AluJo SINE Alu -9 303 2 2323 119 0 0 chr10 30001954 30002265 -115587023 - AluSx SINE Alu -1 311 1 2406 77 7 7 chr10 30002423 30002723 -115586565 - AluSc SINE Alu -9 300 1 1138 132 9 71 chr10 30003009 30003221 -115586067 + AluJo SINE Alu 1 199 -113 1458 120 0 0 chr10 30003232 30003424 -115585864 + AluSg/x SINE Alu 112 303 -9 901 188 38 0 chr10 30003424 30003584 -115585704 + AluJo/FRAM SINE Alu 134 299 -13 455 173 19 0 chr10 30003589 30003693 -115585595 + GA-rich Low_complexity Low_complexity 4 109 0 352 223 64 0 chr10 30003703 30003797 -115585491 - L2 LINE L2 -354 2960 2861 616 321 11 5 chr10 30003957 30004147 -115585141 - MER91A DNA MER1_type -2 194 4 1822 190 76 66 chr10 30004372 30004642 -115584646 - MLT1D LTR MaLR 0 505 226 354 23 0 0 chr10 30004642 30004685 -115584603 + (CA)n Simple_repeat Simple_repeat 1 43 0 1822 190 76 66 chr10 30004685 30004914 -115584374 - MLT1D LTR MaLR -279 226 1 3183 97 41 0 chr10 30005042 30005505 -115583783 + L1PA16 LINE L1 5676 6157 -9 22 0 0 0 chr10 30005505 30005527 -115583761 + AT_rich Low_complexity Low_complexity 1 22 0 1397 211 30 30 chr10 30005860 30006164 -115583124 + AluJo SINE Alu 1 304 -8 504 328 20 10 chr10 30006230 30006425 -115582863 - MIR SINE MIR -55 207 11 2176 133 0 0 chr10 30006442 30006743 -115582545 + AluSx SINE Alu 1 301 -11 242 192 77 0 chr10 30006743 30006821 -115582467 - L1MC4 LINE L1 -1346 6696 6613 233 179 18 36 chr10 30007835 30007891 -115581397 - L2 LINE L2 -75 3238 3184 211 198 70 0 chr10 30007912 30007998 -115581290 + (TA)n Simple_repeat Simple_repeat 2 93 0 1737 114 107 4 chr10 30008121 30008393 -115580895 - AluSx SINE Alu -12 300 1 566 253 15 64 chr10 30009051 30009253 -115580035 - MIR SINE MIR -58 204 13 2021 146 3 3 chr10 30009561 30009856 -115579432 + AluJb SINE Alu 1 295 -17 797 203 122 10 chr10 30010743 30010940 -115578348 - MIR SINE MIR -26 236 18 2208 107 0 0 chr10 30010956 30011276 -115578012 - AluY SINE Alu 0 320 1 309 257 78 49 chr10 30011314 30011559 -115577729 + L1ME4a LINE L1 5869 6120 -1 2197 123 10 0 chr10 30011762 30012063 -115577225 - AluSx SINE Alu -8 304 1 1714 160 35 7 chr10 30013058 30013340 -115575948 - AluJb SINE Alu -22 290 1 1645 105 9 105 chr10 30013351 30013408 -115575880 - L1MB4 LINE L1 0 6180 6119 1751 143 16 50 chr10 30013408 30013730 -115575558 + AluJo SINE Alu 1 311 -1 1645 105 9 105 chr10 30013730 30013909 -115575379 - L1MB4 LINE L1 -61 6119 5983 1943 161 3 0 chr10 30013909 30014208 -115575080 - AluJb SINE Alu -12 300 1 1645 105 9 105 chr10 30014208 30014304 -115574984 - L1MB4 LINE L1 -197 5983 5879 1006 180 43 36 chr10 30014304 30014526 -115574762 - MLT2B1 LTR ERVL -10 510 283 2164 97 3 3 chr10 30015619 30015907 -115573381 - AluSx SINE Alu -16 296 9 1405 170 51 16 chr10 30016248 30016486 -115572802 + MER33 DNA MER1_type 1 243 -2342 1678 160 7 14 chr10 30016486 30016780 -115572508 - AluJb SINE Alu -20 292 1 1405 170 51 16 chr10 30016780 30016860 -115572428 + MER33 DNA MER1_type 243 319 -5 434 316 30 86 chr10 30016877 30017146 -115572142 - MIR SINE MIR 0 262 9 1143 133 0 0 chr10 30017983 30018291 -115570997 + (TCCA)n Simple_repeat Simple_repeat 1 308 0 185 358 32 0 chr10 30018292 30018387 -115570901 - L2 LINE L2 -49 3264 3167 1811 168 6 16 chr10 30018405 30018721 -115570567 - MER4D LTR ERV1 -11 892 580 479 131 0 91 chr10 30018772 30018903 -115570385 - MER4E LTR ERV1 -589 283 62 * 1603 142 77 4 chr10 30018889 30019163 -115570125 - MER49 LTR ERV1 -629 294 1 372 314 48 72 chr10 30019300 30019328 -115569960 - L2 LINE L2 -345 2969 2942 3766 141 51 2 chr10 30019328 30019931 -115569357 + MER41B LTR ERV1 2 634 -1 372 314 48 72 chr10 30019931 30020236 -115569052 - L2 LINE L2 -372 2942 2644 514 239 131 11 chr10 30020968 30021144 -115568144 + LTR33 LTR ERVL 5 201 -320 1590 154 22 11 chr10 30021148 30021420 -115567868 + AluJo SINE Alu 5 279 -33 318 216 0 0 chr10 30021462 30021536 -115567752 + G-rich Low_complexity Low_complexity 2 75 0 276 188 0 0 chr10 30021554 30021623 -115567665 + A-rich Low_complexity Low_complexity 1 69 0 312 294 103 0 chr10 30021634 30021760 -115567528 + L1MCa LINE L1 1162 1300 -5126 3977 194 44 19 chr10 30022038 30023015 -115566273 + L1PA11 LINE L1 3161 4161 -1985 832 144 104 146 chr10 30023421 30023449 -115565839 + L1MB2 LINE L1 5469 5497 -778 6263 118 4 0 chr10 30023449 30024567 -115564721 + L1PA11 LINE L1 5043 6174 0 832 144 104 146 chr10 30024567 30024859 -115564429 + L1MB2 LINE L1 5497 5775 -500 1900 157 9 15 chr10 30024966 30025298 -115563990 + L1MB2 LINE L1 5835 6164 -7 939 259 91 3 chr10 30025305 30025602 -115563686 - L2 LINE L2 -609 2705 2383 1220 271 49 13 chr10 30025603 30026100 -115563188 + ERVL LTR ERVL 4285 4829 -825 1379 122 0 69 chr10 30026180 30026316 -115562972 - L1M2 LINE L1 -559 5741 5597 2482 60 0 3 chr10 30026316 30026616 -115562672 - AluY SINE Alu -12 299 1 2330 102 3 0 chr10 30026616 30026921 -115562367 - AluSg SINE Alu -4 306 1 1379 122 0 69 chr10 30026921 30027028 -115562260 - L1M2 LINE L1 -701 5599 5514 2334 97 0 10 chr10 30027029 30027328 -115561960 + AluSx SINE Alu 2 297 -15 738 143 0 0 chr10 30027359 30027471 -115561817 - AluJb SINE Alu -9 303 192 1749 144 0 0 chr10 30027861 30028118 -115561170 + Tigger3(Golem) DNA MER2_type 2769 3025 -4 1053 236 91 15 chr10 30028445 30028843 -115560445 - L1M4 LINE L1 -1432 4714 4287 233 239 0 15 chr10 30028840 30028907 -115560381 - L1MC/D LINE L1 -707 5535 5470 * 328 144 83 23 chr10 30029099 30029145 -115560143 + (TATAG)n Simple_repeat Simple_repeat 1 43 -97 410 76 197 0 chr10 30029145 30029211 -115560077 + MADE1 DNA Mariner 2 80 0 328 144 83 23 chr10 30029211 30029296 -115559992 + (TATAG)n Simple_repeat Simple_repeat 43 140 0 4568 164 32 66 chr10 30029297 30029803 -115559485 - L1MB1 LINE L1 -65 6103 5581 2477 82 0 0 chr10 30029803 30030109 -115559179 - AluY SINE Alu -5 306 1 4568 164 32 66 chr10 30030109 30030289 -115558999 - L1MB1 LINE L1 -587 5581 5396 264 30 0 0 chr10 30030289 30030322 -115558966 + (TG)n Simple_repeat Simple_repeat 2 34 0 4568 164 32 66 chr10 30030322 30031453 -115557835 - L1MB1 LINE L1 -772 5396 4358 1203 292 63 60 chr10 30031579 30031876 -115557412 - L1M3d LINE L1 -5230 661 366 2296 51 27 0 chr10 30031876 30032172 -115557116 - AluY SINE Alu -7 304 1 1203 292 63 60 chr10 30032172 30032525 -115556763 - L1M3d LINE L1 -5525 366 9 189 0 0 0 chr10 30032533 30032554 -115556734 + (TC)n Simple_repeat Simple_repeat 2 22 0 * 333 0 0 0 chr10 30032553 30032590 -115556698 + (TG)n Simple_repeat Simple_repeat 2 38 0 1822 157 34 7 chr10 30032592 30032885 -115556403 - AluSx SINE Alu -11 301 1 1543 169 13 91 chr10 30032888 30033178 -115556110 - L1MC/D LINE L1 -743 5403 5203 2155 145 24 0 chr10 30033178 30033516 -115555772 - MER7A DNA MER2_type 0 346 3 1543 169 13 91 chr10 30033516 30033819 -115555469 - L1MC/D LINE L1 -943 5203 4878 280 267 0 0 chr10 30033965 30034051 -115555237 - MIR SINE MIR -2 260 175 2272 89 20 0 chr10 30034196 30034489 -115554799 + AluSp SINE Alu 1 299 -14 580 216 86 86 chr10 30034511 30034849 -115554439 - L1MC5 LINE L1 -60 7901 7564 554 154 0 0 chr10 30034945 30035036 -115554252 + L1MB3 LINE L1 5764 5854 -329 2510 168 13 49 chr10 30035193 30035210 -115554078 + L1MA6 LINE L1 5763 5779 -521 2053 143 3 10 chr10 30035210 30035517 -115553771 + AluSx SINE Alu 1 305 -7 2510 168 13 49 chr10 30035517 30035529 -115553759 + L1MA6 LINE L1 5779 5790 -510 270 81 0 0 chr10 30035529 30035566 -115553722 + (CA)n Simple_repeat Simple_repeat 2 38 0 2510 168 13 49 chr10 30035566 30035726 -115553562 + L1MA6 LINE L1 5790 5954 -346 2158 74 0 45 chr10 30035726 30036036 -115553252 + AluY SINE Alu 1 296 -15 2510 168 13 49 chr10 30036036 30036183 -115553105 + L1MA6 LINE L1 5954 6105 -195 2399 124 14 8 chr10 30036183 30036545 -115552743 - THE1B LTR MaLR 0 364 1 2510 168 13 49 chr10 30036545 30036754 -115552534 + L1MA6 LINE L1 6105 6291 -9 865 118 22 7 chr10 30037461 30037596 -115551692 + FLAM_C SINE Alu 7 143 0 29 28 0 0 chr10 30037713 30037749 -115551539 + AT_rich Low_complexity Low_complexity 1 36 0 1464 167 0 20 chr10 30038835 30039086 -115550202 - AluJb SINE Alu -2 310 65 1375 230 92 72 chr10 30039605 30039994 -115549294 + L1M3d LINE L1 684 1064 -4827 2032 147 0 10 chr10 30039994 30040293 -115548995 + AluJo SINE Alu 1 296 -16 1375 230 92 72 chr10 30040293 30040401 -115548887 + L1M3d LINE L1 1064 1168 -4723 1906 144 18 4 chr10 30040401 30040727 -115548561 + AluSx SINE Alu 1 330 0 1375 230 92 72 chr10 30040727 30040827 -115548461 + L1M3d LINE L1 1168 1295 -4596 1839 207 70 27 chr10 30040831 30041271 -115548017 + LTR2B LTR ERV1 32 490 0 3310 262 37 26 chr10 30041272 30042059 -115547229 + L1M1 LINE L1 2542 3319 -4246 2113 129 7 0 chr10 30042059 30042378 -115546910 - AluSx SINE Alu 0 321 1 3310 262 37 26 chr10 30042378 30042699 -115546589 + L1M1 LINE L1 3319 3635 -3930 2262 109 0 3 chr10 30042699 30043002 -115546286 - AluSx SINE Alu -10 302 1 3310 262 37 26 chr10 30043002 30043926 -115545362 + L1M1 LINE L1 3635 4593 -2972 913 159 0 6 chr10 30043930 30044100 -115545188 + L1M1 LINE L1 5634 5802 -1763 2233 89 18 0 chr10 30044101 30044381 -115544907 + AluSg SINE Alu 1 285 -25 609 144 0 0 chr10 30044694 30044791 -115544497 - FRAM SINE Alu -11 165 69 738 129 11 140 chr10 30044793 30044971 -115544317 - MER20 DNA MER1_type -64 155 1 1747 199 3 3 chr10 30045061 30045363 -115543925 - AluJb SINE Alu -8 304 3 2369 98 0 0 chr10 30045446 30045753 -115543535 - AluY SINE Alu -4 307 1 1073 154 36 64 chr10 30045755 30045975 -115543313 - AluJo SINE Alu -17 295 82 1477 157 68 6 chr10 30045975 30046288 -115543000 - L1PA16 LINE L1 0 6154 5801 2094 140 0 7 chr10 30046329 30046629 -115542659 + AluSx SINE Alu 1 298 -14 2911 160 39 30 chr10 30047138 30047681 -115541607 - MLT2B3 LTR ERVL -6 548 1 1693 129 0 24 chr10 30047681 30047936 -115541352 + AluSx SINE Alu 48 296 -16 863 132 0 0 chr10 30047938 30048052 -115541236 + AluSq/x SINE Alu 1 114 -198 288 158 0 0 chr10 30048053 30048110 -115541178 + A-rich Low_complexity Low_complexity 1 57 0 189 0 0 0 chr10 30048183 30048204 -115541084 + (T)n Simple_repeat Simple_repeat 1 21 0 2488 21 45 3 chr10 30048628 30048916 -115540372 - AluY SINE Alu -11 300 1 2364 86 0 7 chr10 30049568 30049870 -115539418 + AluY SINE Alu 1 300 -11 1546 97 21 8 chr10 30049877 30050114 -115539174 + LTR7 LTR ERV1 211 450 0 451 300 56 50 chr10 30050301 30050709 -115538579 - L1ME4a LINE L1 -153 5968 5562 2361 85 3 0 chr10 30050718 30051012 -115538276 - AluSp SINE Alu -18 295 1 2230 91 0 17 chr10 30051064 30051360 -115537928 - AluSx SINE Alu -9 303 13 484 254 7 36 chr10 30052118 30052256 -115537032 - MER94 DNA DNA 0 134 1 502 191 197 0 chr10 30053087 30053234 -115536054 - MIR SINE MIR -1 261 86 1979 107 70 4 chr10 30053478 30053750 -115535538 - AluSg SINE Alu -20 290 1 405 200 0 0 chr10 30053779 30053849 -115535439 + AluJ/FLAM SINE Alu 3 72 -230 1654 286 17 11 chr10 30053868 30054402 -115534886 - LTR48B LTR ERV1 -2 642 106 1284 129 0 0 chr10 30054759 30054930 -115534358 - AluSx SINE Alu -141 171 1 1271 163 0 5 chr10 30054930 30055133 -115534155 + AluJo SINE Alu 102 303 -9 225 0 0 0 chr10 30056368 30056393 -115532895 + (A)n Simple_repeat Simple_repeat 1 25 0 21 0 0 0 chr10 30056715 30056736 -115532552 + AT_rich Low_complexity Low_complexity 1 21 0 2400 55 0 10 chr10 30058500 30058789 -115530499 + AluY SINE Alu 18 303 -8 307 255 81 36 chr10 30059261 30059387 -115529901 + L1ME LINE L1 1 131 -5939 452 200 24 0 chr10 30059388 30059473 -115529815 + FAM SINE Alu 1 78 -98 410 237 11 32 chr10 30059505 30059598 -115529690 + FAM SINE Alu 81 171 -4 1674 199 0 19 chr10 30059781 30060097 -115529191 - AluJo SINE Alu -2 310 1 497 261 82 0 chr10 30060178 30060312 -115528976 + L2 LINE L2 3168 3312 -1 1975 149 7 0 chr10 30060706 30061011 -115528277 - AluSx SINE Alu 0 307 1 309 51 0 0 chr10 30061376 30061415 -115527873 + (TG)n Simple_repeat Simple_repeat 2 40 0 187 248 143 0 chr10 30061702 30061807 -115527481 - MIR SINE MIR -1 261 142 1958 159 0 3 chr10 30061810 30062099 -115527189 - AluJo SINE Alu -24 288 1 2259 98 7 10 chr10 30062274 30062581 -115526707 - AluSq SINE Alu -7 306 1 2172 117 0 26 chr10 30063047 30063354 -115525934 + AluSx SINE Alu 1 299 -13 1406 234 54 22 chr10 30063994 30064362 -115524926 - MLT1F LTR MaLR 0 542 163 832 29 0 39 chr10 30064364 30064467 -115524821 - AluY SINE Alu -16 295 197 536 243 181 7 chr10 30064467 30064611 -115524677 - MLT1F LTR MaLR -371 171 3 307 306 52 17 chr10 30064683 30064856 -115524432 + L1M4 LINE L1 2909 3087 -3059 915 192 6 12 chr10 30064865 30065032 -115524256 + FRAM SINE Alu 1 166 0 1845 90 0 90 chr10 30065033 30065321 -115523967 - AluY SINE Alu -49 262 1 244 242 11 33 chr10 30065375 30065466 -115523822 + L1M4 LINE L1 3202 3290 -2856 1060 163 0 11 chr10 30065500 30065678 -115523610 + FRAM SINE Alu 1 176 0 1201 110 0 0 chr10 30065760 30065923 -115523365 + AluSg/x SINE Alu 144 306 -6 432 0 0 0 chr10 30065962 30066010 -115523278 + (CA)n Simple_repeat Simple_repeat 1 48 0 329 222 137 43 chr10 30066075 30066192 -115523096 - L2 LINE L2 0 3313 3186 2170 106 7 13 chr10 30066221 30066523 -115522765 - AluSx SINE Alu -12 300 1 2617 53 0 0 chr10 30066966 30067270 -115522018 + AluY SINE Alu 1 304 -7 1905 153 13 3 chr10 30067383 30067691 -115521597 + AluJb SINE Alu 2 312 0 2503 32 6 41 chr10 30067990 30068304 -115520984 + AluY SINE Alu 1 303 -8 1683 168 68 7 chr10 30068416 30068708 -115520580 - AluJo SINE Alu -2 310 1 349 329 7 0 chr10 30068761 30068898 -115520390 - LTR67 LTR ERVL -2 555 418 228 83 62 0 chr10 30069285 30069333 -115519955 + (TA)n Simple_repeat Simple_repeat 1 51 0 1901 163 0 10 chr10 30069652 30069952 -115519336 + AluSx SINE Alu 1 297 -15 675 306 41 18 chr10 30070268 30070608 -115518680 - L2 LINE L2 -104 3209 2862 2697 98 3 11 chr10 30070670 30071037 -115518251 + THE1B LTR MaLR 1 364 0 1898 146 9 19 chr10 30071258 30071573 -115517715 + AluJo SINE Alu 1 312 0 188 282 155 0 chr10 30072377 30072448 -115516840 - MIR SINE MIR -150 112 31 887 121 0 0 chr10 30072567 30072691 -115516597 + FRAM SINE Alu 47 170 -6 225 368 88 7 chr10 30072869 30073005 -115516283 + L2 LINE L2 3115 3261 -11 870 249 61 9 chr10 30073155 30073368 -115515920 + MER58A DNA MER1_type 1 224 0 388 304 30 15 chr10 30073382 30073517 -115515771 - L2 LINE L2 0 3272 3136 1296 110 75 35 chr10 30073565 30073792 -115515496 + MER46A DNA MER2_type 1 236 0 1619 186 3 10 chr10 30073851 30074141 -115515147 + AluJb SINE Alu 1 288 -24 207 0 0 0 chr10 30074144 30074167 -115515121 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 22 0 0 0 chr10 30074173 30074195 -115515093 + AT_rich Low_complexity Low_complexity 1 22 0 235 365 109 21 chr10 30074318 30074510 -115514778 - L2 LINE L2 -337 2977 2769 2198 117 0 10 chr10 30074547 30074847 -115514441 + AluSx SINE Alu 1 297 -15 1299 102 0 0 chr10 30074868 30075034 -115514254 + AluSg/x SINE Alu 133 298 -12 406 333 61 21 chr10 30075047 30075326 -115513962 - L2 LINE L2 -798 2516 2227 21 36 0 0 chr10 30076014 30076042 -115513246 + AT_rich Low_complexity Low_complexity 1 28 0 2573 59 10 0 chr10 30076042 30076347 -115512941 + AluY SINE Alu 1 308 -3 868 264 24 0 chr10 30076378 30076590 -115512698 - AluJo SINE Alu -92 220 4 2315 106 3 3 chr10 30077223 30077535 -115511753 + AluSx SINE Alu 1 312 0 434 187 44 0 chr10 30078048 30078139 -115511149 - L1ME3A LINE L1 -12 6158 6064 2264 103 0 7 chr10 30078447 30078747 -115510541 - AluSc SINE Alu -11 298 1 723 181 8 0 chr10 30079908 30080035 -115509253 - FLAM_A SINE Alu -5 128 1 1760 138 4 14 chr10 30080651 30080927 -115508361 + AluJo SINE Alu 39 311 -1 1187 120 0 0 chr10 30081503 30081670 -115507618 - AluY SINE Alu -11 300 134 2398 78 0 0 chr10 30082139 30082435 -115506853 - AluY SINE Alu -15 296 1 401 167 0 26 chr10 30082632 30082710 -115506578 + LTR33 LTR ERVL 446 521 0 2204 100 3 0 chr10 30083086 30083413 -115505875 + AluSp SINE Alu 2 329 0 1064 261 4 11 chr10 30083413 30083662 -115505626 - MIR SINE MIR -8 254 5 2105 122 0 0 chr10 30083864 30084152 -115505136 + AluSx SINE Alu 23 310 -2 243 253 47 93 chr10 30084327 30084432 -115504856 - MER5A DNA MER1_type -1 188 91 1682 166 155 59 chr10 30084432 30084547 -115504741 + MLT1D LTR MaLR 3 106 -399 2076 113 74 0 chr10 30084547 30084831 -115504457 + AluSq SINE Alu 1 305 -8 1682 166 155 59 chr10 30084831 30085172 -115504116 + MLT1D LTR MaLR 106 503 -2 243 253 47 93 chr10 30085172 30085216 -115504072 - MER5A DNA MER1_type -98 91 46 3464 155 4 6 chr10 30085216 30085740 -115503548 + MER1A DNA MER1_type 1 523 -4 192 217 101 43 chr10 30086054 30086072 -115503216 + MIR SINE MIR 79 95 -167 1717 225 14 100 chr10 30086072 30086455 -115502833 - LTR26B LTR ERV1 -3 528 113 1691 172 0 27 chr10 30086455 30086752 -115502536 + AluJo SINE Alu 1 289 -23 189 0 0 0 chr10 30086755 30086776 -115502512 + (TAAA)n Simple_repeat Simple_repeat 4 24 0 1717 225 14 100 chr10 30086776 30086966 -115502322 - LTR26B LTR ERV1 -420 111 1 192 217 101 43 chr10 30086966 30087016 -115502272 + MIR SINE MIR 95 151 -111 309 285 85 8 chr10 30087069 30087199 -115502089 + L1M4 LINE L1 3850 3989 -2157 2074 136 0 10 chr10 30087354 30087649 -115501639 - AluSx SINE Alu -20 292 1 25 31 0 0 chr10 30088362 30088394 -115500894 + AT_rich Low_complexity Low_complexity 1 32 0 842 139 0 16 chr10 30088603 30088732 -115500556 + FLAM_C SINE Alu 1 127 -16 2112 131 20 0 chr10 30088849 30089147 -115500141 - AluSx SINE Alu -6 306 3 233 216 0 27 chr10 30089381 30089455 -115499833 + CT-rich Low_complexity Low_complexity 2 73 0 2134 125 0 3 chr10 30089795 30090092 -115499196 - AluSx SINE Alu -16 296 1 2233 104 0 0 chr10 30090667 30090954 -115498334 + AluY SINE Alu 1 287 -24 5600 132 15 26 chr10 30090956 30091803 -115497485 - L1PA16 LINE L1 -4 6162 5325 1610 195 21 7 chr10 30091803 30092090 -115497198 - AluJo SINE Alu -21 291 1 5600 132 15 26 chr10 30092090 30092215 -115497073 - L1PA16 LINE L1 -841 5325 5200 2871 102 9 47 chr10 30092264 30092312 -115496976 + MER57B LTR ERV1 1 49 -385 2143 89 34 3 chr10 30092312 30092604 -115496684 - AluSq SINE Alu -12 301 1 2871 102 9 47 chr10 30092604 30093006 -115496282 + MER57B LTR ERV1 49 434 0 237 307 87 31 chr10 30094299 30094368 -115494920 - L2 LINE L2 -5 3308 3244 2504 75 0 3 chr10 30094368 30094673 -115494615 + AluSp SINE Alu 1 304 -9 237 307 87 31 chr10 30094673 30094730 -115494558 - L2 LINE L2 -69 3244 3175 2154 159 75 31 chr10 30094825 30095303 -115493985 - MLT1D LTR MaLR 0 505 7 204 368 78 19 chr10 30095610 30095868 -115493420 - L2 LINE L2 -710 2604 2332 895 218 6 6 chr10 30095882 30096047 -115493241 + MER45A DNA AcHobo 1 165 -13 2581 82 62 3 chr10 30096576 30096930 -115492358 - THE1C LTR MaLR 0 375 1 482 252 0 0 chr10 30097084 30097195 -115492093 + FRAM SINE Alu 1 111 -65 246 211 18 0 chr10 30097283 30097340 -115491948 + AluJ/monomer SINE Alu 244 301 -1 2205 117 0 0 chr10 30097417 30097715 -115491573 + AluSx SINE Alu 1 298 -14 24 0 0 0 chr10 30097715 30097739 -115491549 + AT_rich Low_complexity Low_complexity 1 24 0 1976 144 23 0 chr10 30098173 30098478 -115490810 + AluSx SINE Alu 1 312 0 1731 167 17 20 chr10 30098496 30098795 -115490493 + AluJo SINE Alu 3 300 -12 918 98 17 23 chr10 30098821 30098995 -115490293 + (GAAA)n Simple_repeat Simple_repeat 4 176 0 655 264 73 41 chr10 30099156 30099541 -115489747 + MLT1J2 LTR MaLR 22 409 0 1163 220 0 0 chr10 30099629 30099856 -115489432 - AluJo SINE Alu -7 305 79 2629 45 0 6 chr10 30100156 30100467 -115488821 - AluY SINE Alu -2 309 1 1909 130 46 0 chr10 30100467 30100751 -115488537 - AluSx SINE Alu -14 298 2 643 278 144 17 chr10 30100766 30101183 -115488105 - L1MC/D LINE L1 -2081 5727 5258 1936 139 39 32 chr10 30101350 30101660 -115487628 - AluSx SINE Alu 0 312 1 821 103 0 0 chr10 30101665 30101772 -115487516 - AluSq/x SINE Alu -205 107 1 674 271 33 19 chr10 30101917 30102131 -115487157 - U3 snRNA snRNA 0 217 1 818 162 6 0 chr10 30102210 30102389 -115486899 + CT-rich Low_complexity Low_complexity 1 180 0 695 170 9 6 chr10 30102409 30102770 -115486518 + CT-rich Low_complexity Low_complexity 1 362 0 255 125 0 0 chr10 30103337 30103377 -115485911 + (TGAA)n Simple_repeat Simple_repeat 2 41 0 2044 134 0 26 chr10 30103480 30103793 -115485495 + AluSx SINE Alu 6 310 -2 1695 189 10 3 chr10 30103966 30104268 -115485020 - AluJo SINE Alu -8 304 1 205 340 53 0 chr10 30104543 30104637 -115484651 + L2 LINE L2 3196 3294 -19 2005 135 0 4 chr10 30105174 30105455 -115483833 + AluSx SINE Alu 5 284 -28 976 204 0 57 chr10 30105474 30105704 -115483584 + MER20 DNA MER1_type 3 219 0 755 187 0 0 chr10 30106192 30106315 -115482973 + FLAM_A SINE Alu 1 123 -10 979 238 63 3 chr10 30106320 30106623 -115482665 - L1MC/D LINE L1 -970 5176 4856 2297 92 6 25 chr10 30106633 30106949 -115482339 + AluSp SINE Alu 1 310 -3 449 180 31 11 chr10 30106995 30107143 -115482145 + L1MC/D LINE L1 5183 5333 -838 724 199 8 0 chr10 30107143 30107274 -115482014 + FLAM_A SINE Alu 1 132 -1 1923 104 18 0 chr10 30107313 30107592 -115481696 + L1MC/D LINE L1 5315 5598 -735 280 114 0 0 chr10 30107592 30107636 -115481652 + Alu SINE Alu 254 297 -3 2296 120 0 0 chr10 30107746 30108055 -115481233 + AluSg SINE Alu 1 309 -1 2180 114 7 0 chr10 30108392 30108698 -115480590 - AluSx SINE Alu -2 310 3 2964 155 27 12 chr10 30108881 30109392 -115479896 + Tigger1 DNA MER2_type 1 519 -1899 4900 151 42 23 chr10 30109393 30109982 -115479306 - L1PB4 LINE L1 -76 6080 5503 1432 171 77 21 chr10 30109982 30110268 -115479020 - AluJo SINE Alu -10 302 1 4900 151 42 23 chr10 30110268 30110279 -115479009 - L1PB4 LINE L1 -653 5503 5494 2334 73 0 36 chr10 30110279 30110581 -115478707 - AluY SINE Alu -18 293 3 4900 151 42 23 chr10 30110581 30111039 -115478249 - L1PB4 LINE L1 -662 5494 4988 1561 125 27 0 chr10 30111039 30111263 -115478025 + MER30 DNA MER1_type 1 230 0 4900 151 42 23 chr10 30111263 30111544 -115477744 - L1PB4 LINE L1 -1168 4988 4714 3135 112 24 4 chr10 30111544 30111999 -115477289 + Tigger1 DNA MER2_type 1950 2413 -5 1211 255 105 20 chr10 30112060 30112452 -115476836 + MLT1J1 LTR MaLR 17 441 -5 2101 111 31 3 chr10 30112474 30112763 -115476525 - AluSx SINE Alu -15 297 1 492 318 130 12 chr10 30112769 30113099 -115476189 - L1MC4a LINE L1 -1930 5878 5510 504 218 79 71 chr10 30113403 30113832 -115475456 - MLT1H LTR MaLR 0 530 60 535 271 20 39 chr10 30113852 30114055 -115475233 - HERV16 LTR ERVL -1340 3656 3458 887 180 0 0 chr10 30114060 30114210 -115475078 - FRAM SINE Alu -3 173 24 1949 132 48 0 chr10 30114551 30114840 -115474448 + AluSx SINE Alu 1 303 -9 565 311 85 9 chr10 30114969 30115443 -115473845 - HERV16 LTR ERVL -2440 3214 2675 2286 122 3 0 chr10 30115449 30115753 -115473535 - AluSx SINE Alu -7 305 1 280 250 87 17 chr10 30115982 30116154 -115473134 - L1M1 LINE L1 -835 5468 5285 21 95 0 0 chr10 30116172 30116235 -115473053 + AT_rich Low_complexity Low_complexity 1 63 0 22 70 0 0 chr10 30116245 30116288 -115473000 + AT_rich Low_complexity Low_complexity 1 43 0 37 110 0 0 chr10 30116354 30116517 -115472771 + AT_rich Low_complexity Low_complexity 1 163 0 589 333 79 33 chr10 30116602 30116690 -115472598 + L2 LINE L2 1834 1916 -1398 2197 128 0 0 chr10 30116690 30116987 -115472301 + AluSx SINE Alu 1 297 -15 589 333 79 33 chr10 30116987 30117417 -115471871 + L2 LINE L2 1916 2376 -938 485 266 39 7 chr10 30117417 30117571 -115471717 + L2 LINE L2 1768 1926 -1388 1241 190 33 94 chr10 30117584 30117915 -115471373 - AluJo SINE Alu -1 311 1 263 318 48 21 chr10 30117920 30118109 -115471179 + L2 LINE L2 2842 3035 -237 1634 178 46 4 chr10 30119166 30119447 -115469841 + AluJo SINE Alu 1 293 -19 1347 307 30 22 chr10 30120011 30120690 -115468598 + ERVL LTR ERVL 2154 2852 -2633 1822 166 7 7 chr10 30120708 30120997 -115468291 + AluJo SINE Alu 1 289 -23 409 270 20 59 chr10 30121016 30121168 -115468120 + ERVL LTR ERVL 2949 3094 -2560 1262 288 30 30 chr10 30121198 30121664 -115467624 + ERVL LTR ERVL 3280 3745 -2019 2631 186 20 5 chr10 30121734 30122181 -115467107 - MER82 DNA MER2_type -1 652 199 332 102 0 0 chr10 30122268 30122317 -115466971 - MLT2B3 LTR ERVL -8 512 464 434 108 17 42 chr10 30122317 30122437 -115466851 + (TA)n Simple_repeat Simple_repeat 2 118 0 936 227 86 39 chr10 30122519 30122775 -115466513 - MLT2B3 LTR ERVL -286 268 1 608 266 0 0 chr10 30123044 30123183 -115466105 - MER82 DNA MER2_type -514 139 1 3028 92 34 75 chr10 30123507 30124239 -115465049 - MER51A LTR ERV1 0 634 1 1062 307 60 41 chr10 30124241 30124952 -115464336 + L2 LINE L2 1846 2570 -744 2111 102 20 36 chr10 30125388 30125692 -115463596 + AluSx SINE Alu 1 299 -13 1813 136 7 52 chr10 30126508 30126634 -115462654 + AluJo SINE Alu 5 135 -177 186 43 0 0 chr10 30126634 30126657 -115462631 + (TA)n Simple_repeat Simple_repeat 1 23 0 1813 136 7 52 chr10 30126657 30126838 -115462450 + AluJo SINE Alu 135 298 -14 312 27 0 0 chr10 30126847 30126884 -115462404 + (CA)n Simple_repeat Simple_repeat 2 38 0 365 358 81 11 chr10 30127258 30127529 -115461759 + L1MC/D LINE L1 5454 5743 -2065 235 254 15 15 chr10 30127559 30127626 -115461662 - MIR SINE MIR -24 238 172 338 261 0 9 chr10 30127638 30127659 -115461629 - L1MA4A LINE L1 -2 6301 5969 2217 106 0 29 chr10 30127659 30127971 -115461317 - AluSx SINE Alu -9 303 1 4956 127 20 1 chr10 30127971 30128728 -115460560 - L1PB4 LINE L1 -6 6150 5380 294 280 30 30 chr10 30128753 30128853 -115460435 - MIR SINE MIR -120 142 43 2368 84 0 47 chr10 30128861 30129183 -115460105 - AluSq SINE Alu -6 307 1 2209 128 0 0 chr10 30129349 30129647 -115459641 + AluSx SINE Alu 1 298 -14 1851 143 49 0 chr10 30129725 30130011 -115459277 + AluSq SINE Alu 1 300 -13 258 33 0 0 chr10 30130106 30130136 -115459152 - LTR6A LTR ERV1 -462 102 73 1116 137 0 19 chr10 30131209 30131370 -115457918 - FRAM SINE Alu -24 152 1 2106 134 0 0 chr10 30131389 30131680 -115457608 + AluSx SINE Alu 1 291 -21 475 350 30 18 chr10 30131748 30131998 -115457290 - MIR SINE MIR -9 253 3 718 179 32 0 chr10 30132456 30132579 -115456709 + AluJo/FLAM SINE Alu 1 127 -175 1433 175 52 4 chr10 30132581 30132850 -115456438 + AluJo SINE Alu 1 282 -30 1683 193 17 0 chr10 30133075 30133370 -115455918 - AluJb SINE Alu -12 300 1 210 105 0 0 chr10 30133381 30133419 -115455869 + (TTTC)n Simple_repeat Simple_repeat 3 40 0 1835 142 0 62 chr10 30133421 30133730 -115455558 - AluJb SINE Alu -22 290 1 2397 48 45 0 chr10 30133803 30134092 -115455196 + AluY SINE Alu 1 302 -9 2379 98 0 13 chr10 30134712 30135028 -115454260 - AluSx SINE Alu 0 312 1 258 188 232 0 chr10 30135209 30135278 -115454010 - MLT1J2 LTR MaLR 0 450 366 577 245 177 10 chr10 30135349 30135541 -115453747 - MLT1J2 LTR MaLR -207 243 20 2139 179 6 0 chr10 30135589 30135953 -115453335 + MER47A DNA MER2_type 1 366 0 243 240 23 154 chr10 30136575 30136796 -115452492 - 7SK RNA RNA -1 192 1 1753 159 13 40 chr10 30136898 30137199 -115452089 + AluJo SINE Alu 7 299 -13 1639 168 50 18 chr10 30137571 30137730 -115451558 - AluJo SINE Alu -23 289 116 270 0 0 0 chr10 30137730 30137760 -115451528 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1639 168 50 18 chr10 30137760 30137880 -115451408 - AluJo SINE Alu -196 116 1 612 250 28 6 chr10 30138320 30138496 -115450792 + MIR SINE MIR 13 192 -70 1938 100 32 11 chr10 30138501 30138780 -115450508 + AluSq SINE Alu 5 289 -24 188 316 0 26 chr10 30138802 30138878 -115450410 + MIR SINE MIR 185 258 -4 2402 85 0 0 chr10 30138958 30139252 -115450036 + AluSp SINE Alu 1 294 -19 185 342 177 13 chr10 30139403 30139561 -115449727 + L2 LINE L2 2573 2756 -558 226 189 176 14 chr10 30139776 30139850 -115449438 + MER5A DNA MER1_type 24 109 -80 1603 160 0 107 chr10 30139892 30140061 -115449227 - AluSx SINE Alu 0 302 185 2032 123 0 33 chr10 30140061 30140361 -115448927 - AluSx SINE Alu -22 290 1 1603 160 0 107 chr10 30140361 30140529 -115448759 - AluSx SINE Alu -117 185 1 1905 172 7 0 chr10 30140884 30141214 -115448074 + AluSx SINE Alu 1 312 0 25 0 0 0 chr10 30141371 30141396 -115447892 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr10 30141457 30141480 -115447808 + AT_rich Low_complexity Low_complexity 1 23 0 2041 120 10 36 chr10 30141503 30141811 -115447477 - AluSx SINE Alu -12 300 1 227 284 25 0 chr10 30142079 30142160 -115447128 + L1ME LINE L1 5533 5615 -506 1700 173 4 0 chr10 30142186 30142458 -115446830 + AluJo SINE Alu 28 300 -12 2172 106 0 0 chr10 30142666 30142950 -115446338 + AluSx SINE Alu 3 286 -26 337 294 40 8 chr10 30143214 30143340 -115445948 - MIR SINE MIR -72 190 61 2146 118 0 7 chr10 30144492 30144789 -115444499 + AluSx SINE Alu 1 295 -17 2107 156 72 33 chr10 30145008 30145463 -115443825 - MLT1D LTR MaLR -26 479 7 204 368 78 19 chr10 30145770 30146028 -115443260 - L2 LINE L2 -710 2604 2332 895 218 6 6 chr10 30146042 30146207 -115443081 + MER45A DNA AcHobo 1 165 -13 2581 82 62 3 chr10 30146736 30147090 -115442198 - THE1C LTR MaLR 0 375 1 482 252 0 0 chr10 30147244 30147355 -115441933 + FRAM SINE Alu 1 111 -65 246 211 18 0 chr10 30147443 30147500 -115441788 + AluJ/monomer SINE Alu 244 301 -1 2327 98 0 3 chr10 30147577 30147874 -115441414 + AluSx SINE Alu 1 296 -16 273 278 189 39 chr10 30148166 30148346 -115440942 - L2 LINE L2 -516 2798 2592 1893 176 0 0 chr10 30148377 30148678 -115440610 - AluSx SINE Alu -11 301 1 270 247 86 74 chr10 30148854 30149016 -115440272 - L1MC5 LINE L1 -30 7931 7768 2161 126 0 3 chr10 30149031 30149332 -115439956 - AluSq SINE Alu -13 300 1 1951 117 3 27 chr10 30149883 30150183 -115439105 + AluSx SINE Alu 1 293 -19 3815 124 116 9 chr10 30150190 30150874 -115438414 + MER7A DNA MER2_type 2272 336 0 419 263 53 29 chr10 30151063 30151234 -115438054 - MER5B DNA MER1_type -1 177 3 308 301 123 21 chr10 30152265 30152501 -115436787 - L2 LINE L2 -5 3308 3049 1899 80 52 52 chr10 30152585 30152874 -115436414 + AluY SINE Alu 1 289 -22 530 230 182 10 chr10 30153310 30153519 -115435769 - MIR SINE MIR -10 252 8 618 261 11 27 chr10 30153529 30153713 -115435575 + MER5A DNA MER1_type 9 189 0 14588 124 42 6 chr10 30155639 30155976 -115433312 - Tigger1 DNA MER2_type -1 2417 2093 2197 114 3 3 chr10 30155976 30156274 -115433014 + AluSx SINE Alu 1 298 -14 14588 124 42 6 chr10 30156274 30158203 -115431085 - Tigger1 DNA MER2_type -325 2093 70 2166 122 0 0 chr10 30158663 30158951 -115430337 + AluSx SINE Alu 1 288 -24 28 0 0 0 chr10 30158957 30158985 -115430303 + AT_rich Low_complexity Low_complexity 1 28 0 1503 170 28 60 chr10 30159263 30159580 -115429708 - AluJo SINE Alu -5 307 1 213 39 0 0 chr10 30159656 30159682 -115429606 + (TCC)n Simple_repeat Simple_repeat 3 28 0 2307 90 7 13 chr10 30159685 30159850 -115429438 - AluSc SINE Alu -11 298 134 2892 16 0 0 chr10 30159850 30160163 -115429125 - AluYb8 SINE Alu -5 313 1 2307 90 7 13 chr10 30160163 30160297 -115428991 - AluSc SINE Alu -175 134 1 2315 64 7 7 chr10 30160307 30160605 -115428683 - AluYa5 SINE Alu -13 298 1 900 75 14 96 chr10 30160605 30160751 -115428537 - AluSg SINE Alu -176 134 1 789 191 0 6 chr10 30160754 30160916 -115428372 - L1ME LINE L1 -730 5436 5276 2115 123 0 0 chr10 30162100 30162443 -115426845 + AluSx SINE Alu 1 343 0 675 94 0 0 chr10 30162492 30162588 -115426700 + (TTTCC)n Simple_repeat Simple_repeat 3 98 0 1389 173 0 16 chr10 30162588 30162831 -115426457 - AluJo SINE Alu -30 282 44 2302 109 3 0 chr10 30163297 30163608 -115425680 - AluSx SINE Alu 0 312 1 2617 53 0 0 chr10 30164051 30164355 -115424933 + AluY SINE Alu 1 304 -7 1883 154 13 3 chr10 30164468 30164773 -115424515 + AluJb SINE Alu 2 309 -3 2503 32 6 41 chr10 30165075 30165389 -115423899 + AluY SINE Alu 1 303 -8 1675 168 69 7 chr10 30165501 30165792 -115423496 - AluJo SINE Alu -3 309 1 349 329 7 0 chr10 30165845 30165982 -115423306 - LTR67 LTR ERVL -2 555 418 195 104 62 0 chr10 30166369 30166417 -115422871 + (TA)n Simple_repeat Simple_repeat 1 51 0 1901 163 0 10 chr10 30166736 30167036 -115422252 + AluSx SINE Alu 1 297 -15 656 300 44 21 chr10 30167352 30167692 -115421596 - L2 LINE L2 -104 3209 2862 2487 114 5 14 chr10 30167754 30168121 -115421167 + THE1B LTR MaLR 1 364 0 1962 142 3 19 chr10 30168342 30168659 -115420629 + AluJo SINE Alu 1 312 0 791 182 0 0 chr10 30168868 30169000 -115420288 - FLAM_A SINE Alu -1 132 1 192 200 0 44 chr10 30169016 30169061 -115420227 + MIR SINE MIR 117 159 -103 375 283 20 0 chr10 30169161 30169260 -115420028 + L2 LINE L2 3213 3313 0 335 336 55 23 chr10 30169314 30169534 -115419754 + L2 LINE L2 2608 2834 -480 2042 140 0 10 chr10 30169743 30170051 -115419237 - AluSx SINE Alu -3 309 5 990 260 48 51 chr10 30170343 30170716 -115418572 + MER110 LTR ERV1 105 476 -15 2444 78 0 31 chr10 30171093 30171414 -115417874 + AluY SINE Alu 1 311 0 6257 156 17 56 chr10 30221432 30222415 -115366873 - L1 LINE L1 -881 5265 4344 2446 81 0 7 chr10 30222415 30222723 -115366565 + AluY SINE Alu 2 307 -4 6257 156 17 56 chr10 30222723 30223037 -115366251 - L1 LINE L1 -1802 4344 4019 668 228 28 11 chr10 30223043 30223223 -115366065 - L1 LINE L1 -3734 2412 2230 2450 77 0 0 chr10 30223237 30223548 -115365740 + AluY SINE Alu 1 311 0 541 133 0 0 chr10 30223707 30223782 -115365506 - AluS SINE Alu -237 76 2 1349 191 53 38 chr10 30224815 30224843 -115364445 - L1M4 LINE L1 -3149 2997 2971 1610 182 0 45 chr10 30224843 30224999 -115364289 - AluJo SINE Alu -13 299 162 2293 65 0 68 chr10 30224999 30225322 -115363966 - AluY SINE Alu -10 301 1 1610 182 0 45 chr10 30225322 30225478 -115363810 - AluJo SINE Alu -150 162 1 1349 191 53 38 chr10 30225478 30225560 -115363728 - L1M4 LINE L1 -3175 2971 2892 218 56 28 0 chr10 30225560 30225596 -115363692 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 2254 102 10 0 chr10 30225598 30225893 -115363395 - AluSp SINE Alu -15 298 1 1349 191 53 38 chr10 30225893 30226119 -115363169 - L1M4 LINE L1 -3254 2892 2652 566 156 128 18 chr10 30226159 30226268 -115363020 - FLAM_C SINE Alu -16 127 7 382 236 146 14 chr10 30226283 30226427 -115362861 - L1M4 LINE L1 -3536 2610 2448 6339 116 11 23 chr10 30226496 30227496 -115361792 - L1MA5A LINE L1 0 6297 5310 2178 110 7 0 chr10 30227496 30227788 -115361500 - AluSx SINE Alu -18 294 1 1687 116 56 8 chr10 30228336 30228615 -115360673 + AluSx SINE Alu 21 311 0 816 164 0 8 chr10 30228652 30228780 -115360508 - FLAM_C SINE Alu -16 127 1 605 214 24 0 chr10 30228912 30229038 -115360250 + MER5A DNA MER1_type 61 189 0 2125 181 65 117 chr10 30229483 30229565 -115359723 - LTR8A LTR ERV1 -3 724 639 2054 124 0 0 chr10 30229565 30229838 -115359450 + AluSx SINE Alu 1 273 -39 2125 181 65 117 chr10 30229838 30230518 -115358770 - LTR8A LTR ERV1 -88 639 1 244 237 85 0 chr10 30231089 30231148 -115358140 + MIR SINE MIR 84 147 -61 2246 102 3 3 chr10 30231160 30231454 -115357834 - AluSx SINE Alu -18 294 1 1877 178 0 0 chr10 30231479 30231777 -115357511 - AluJb SINE Alu -14 298 1 1523 79 0 88 chr10 30232106 30232357 -115356931 + AluSq SINE Alu 78 308 0 23 0 0 0 chr10 30233086 30233109 -115356179 + AT_rich Low_complexity Low_complexity 1 23 0 1599 188 14 0 chr10 30233109 30233391 -115355897 - AluJo SINE Alu -26 286 1 2161 114 0 23 chr10 30233463 30233769 -115355519 + AluSg SINE Alu 1 299 -11 2476 72 0 0 chr10 30234110 30234402 -115354886 - AluSq SINE Alu -21 292 1 2393 87 7 0 chr10 30234641 30234941 -115354347 + AluSq SINE Alu 1 302 -11 265 342 40 7 chr10 30235433 30235585 -115353703 - L3 LINE CR1 -159 1418 1262 336 269 50 25 chr10 30235953 30236072 -115353216 - MIR3 SINE MIR -22 186 65 321 121 52 0 chr10 30236205 30236263 -115353025 + L1ME4a LINE L1 6060 6120 -1 1909 142 14 3 chr10 30236280 30236576 -115352712 + AluSx SINE Alu 11 309 -3 738 167 0 15 chr10 30236586 30236718 -115352570 + FLAM_C SINE Alu 1 130 -3 864 75 0 0 chr10 30236718 30236825 -115352463 + U6 snRNA snRNA 1 107 0 24 0 0 0 chr10 30237628 30237652 -115351636 + GC_rich Low_complexity Low_complexity 1 24 0 1860 155 18 0 chr10 30239237 30239549 -115349739 + AluSx SINE Alu 3 319 0 806 163 0 0 chr10 30239552 30239675 -115349613 + AluJo SINE Alu 84 206 -106 2402 85 0 0 chr10 30239885 30240179 -115349109 + AluSp SINE Alu 1 294 -19 181 340 183 13 chr10 30240335 30240488 -115348800 + L2 LINE L2 2578 2756 -558 226 189 176 14 chr10 30240703 30240777 -115348511 + MER5A DNA MER1_type 24 109 -80 1603 160 0 107 chr10 30240819 30240988 -115348300 - AluSx SINE Alu 0 302 185 2032 123 0 33 chr10 30240988 30241288 -115348000 - AluSx SINE Alu -22 290 1 1603 160 0 107 chr10 30241288 30241456 -115347832 - AluSx SINE Alu -117 185 1 1905 172 7 0 chr10 30241811 30242141 -115347147 + AluSx SINE Alu 1 312 0 25 0 0 0 chr10 30242297 30242322 -115346966 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr10 30242383 30242406 -115346882 + AT_rich Low_complexity Low_complexity 1 23 0 2041 120 10 36 chr10 30242429 30242737 -115346551 - AluSx SINE Alu -12 300 1 227 284 25 0 chr10 30243005 30243086 -115346202 + L1ME LINE L1 5533 5615 -506 1700 173 4 0 chr10 30243112 30243384 -115345904 + AluJo SINE Alu 28 300 -12 2071 114 0 7 chr10 30243588 30243877 -115345411 + AluSx SINE Alu 3 289 -23 337 294 40 8 chr10 30244138 30244264 -115345024 - MIR SINE MIR -72 190 61 2164 115 0 7 chr10 30245416 30245712 -115343576 + AluSx SINE Alu 1 294 -18 1920 147 29 3 chr10 30245718 30246030 -115343258 + MER7A DNA MER2_type 1 318 -28 438 169 14 0 chr10 30246131 30246202 -115343086 + MER7A DNA MER2_type 262 333 -3 1053 236 91 15 chr10 30246529 30246927 -115342361 - L1M4 LINE L1 -1432 4714 4287 233 239 0 15 chr10 30246924 30246991 -115342297 - L1MC/D LINE L1 -707 5535 5470 * 328 144 83 23 chr10 30247183 30247229 -115342059 + (TATAG)n Simple_repeat Simple_repeat 1 43 -97 410 76 197 0 chr10 30247229 30247295 -115341993 + MADE1 DNA Mariner 2 80 0 328 144 83 23 chr10 30247295 30247380 -115341908 + (TATAG)n Simple_repeat Simple_repeat 43 140 0 5327 163 29 67 chr10 30247381 30247887 -115341401 - L1MB1 LINE L1 -65 7522 6998 2477 82 0 0 chr10 30247887 30248193 -115341095 - AluY SINE Alu -5 306 1 5327 163 29 67 chr10 30248193 30248373 -115340915 - L1MB1 LINE L1 -589 6998 6813 264 30 0 0 chr10 30248373 30248406 -115340882 + (TG)n Simple_repeat Simple_repeat 2 34 0 5327 163 29 67 chr10 30248406 30249521 -115339767 - L1MB1 LINE L1 -774 6813 5810 2185 91 18 0 chr10 30249521 30249862 -115339426 - AluSg SINE Alu 0 346 1 5327 163 29 67 chr10 30249862 30250033 -115339255 - L1MB1 LINE L1 -1777 5810 5634 1918 269 45 49 chr10 30250037 30251031 -115338257 - L1MB1 LINE L1 -2972 4593 3596 2262 109 0 3 chr10 30251031 30251334 -115337954 + AluSx SINE Alu 1 302 -10 1918 269 45 49 chr10 30251334 30251655 -115337633 - L1MB1 LINE L1 -3969 3596 3275 2114 129 7 0 chr10 30251655 30251974 -115337314 + AluSx SINE Alu 1 321 0 1918 269 45 49 chr10 30251974 30252761 -115336527 - L1MB1 LINE L1 -4290 3275 2542 1839 207 70 27 chr10 30252762 30253202 -115336086 - LTR2B LTR ERV1 0 490 32 1455 227 91 71 chr10 30253206 30253306 -115335982 - L1M3d LINE L1 -4596 1295 1198 1905 144 18 4 chr10 30253306 30253632 -115335656 - AluSx SINE Alu 0 330 1 1455 227 91 71 chr10 30253632 30253740 -115335548 - L1M3d LINE L1 -4693 1198 1094 2018 151 0 10 chr10 30253740 30254039 -115335249 - AluJo SINE Alu -16 296 1 1455 227 91 71 chr10 30254039 30254436 -115334852 - L1M3d LINE L1 -4797 1094 676 1153 284 76 62 chr10 30254591 30255119 -115334169 - L1M3d LINE L1 -5235 656 351 2659 43 0 0 chr10 30255119 30255423 -115333865 - AluY SINE Alu -7 304 1 1153 284 76 62 chr10 30255423 30255772 -115333516 - L1M3d LINE L1 -5540 351 9 189 0 0 0 chr10 30255780 30255801 -115333487 + (TC)n Simple_repeat Simple_repeat 2 22 0 * 333 0 0 0 chr10 30255800 30255837 -115333451 + (TG)n Simple_repeat Simple_repeat 2 38 0 1822 157 34 7 chr10 30255839 30256132 -115333156 - AluSx SINE Alu -11 301 1 1543 169 13 91 chr10 30256135 30256425 -115332863 - L1MC/D LINE L1 -743 5403 5203 2155 145 24 0 chr10 30256425 30256763 -115332525 - MER7A DNA MER2_type 0 346 3 1543 169 13 91 chr10 30256763 30257066 -115332222 - L1MC/D LINE L1 -943 5203 4878 280 267 0 0 chr10 30257212 30257298 -115331990 - MIR SINE MIR -2 260 175 2272 89 20 0 chr10 30257443 30257736 -115331552 + AluSp SINE Alu 1 299 -14 580 216 86 86 chr10 30257758 30258096 -115331192 - L1MC5 LINE L1 -60 7901 7564 2321 164 8 10 chr10 30258192 30258594 -115330694 + L1MB2 LINE L1 5764 6164 -7 450 175 217 0 chr10 30258601 30258721 -115330567 - L2 LINE L2 -609 2705 2560 649 313 32 4 chr10 30258831 30259077 -115330211 + ERVL LTR ERVL 4441 4693 -1071 1497 116 19 107 chr10 30259289 30259425 -115329863 - L1M2 LINE L1 -559 5741 5595 2482 60 0 3 chr10 30259425 30259725 -115329563 - AluY SINE Alu -12 299 1 2330 102 3 0 chr10 30259725 30260030 -115329258 - AluSg SINE Alu -4 306 1 1497 116 19 107 chr10 30260030 30260137 -115329151 - L1M2 LINE L1 -704 5596 5481 2334 97 0 10 chr10 30260137 30260436 -115328852 + AluSx SINE Alu 2 297 -15 1497 116 19 107 chr10 30260436 30260467 -115328821 - L1M2 LINE L1 -819 5481 5491 1967 178 0 0 chr10 30260467 30260770 -115328518 - AluJo SINE Alu -9 303 1 1497 116 19 107 chr10 30260770 30260802 -115328486 - L1M2 LINE L1 -808 5492 5459 342 221 47 35 chr10 30260831 30260917 -115328371 + AluY SINE Alu 1 87 -221 1748 150 7 18 chr10 30261041 30261327 -115327961 + AluSx SINE Alu 21 303 -9 270 81 0 0 chr10 30261339 30261376 -115327912 + (CA)n Simple_repeat Simple_repeat 2 38 0 2503 162 13 49 chr10 30261376 30261536 -115327752 + L1MA6 LINE L1 5792 5956 -344 2158 74 0 45 chr10 30261536 30261846 -115327442 + AluY SINE Alu 1 296 -15 2503 162 13 49 chr10 30261846 30261992 -115327296 + L1MA6 LINE L1 5956 6106 -194 2399 124 14 8 chr10 30261992 30262354 -115326934 - THE1B LTR MaLR 0 364 1 2503 162 13 49 chr10 30262354 30262563 -115326725 + L1MA6 LINE L1 6106 6291 -9 865 118 22 7 chr10 30263270 30263405 -115325883 + FLAM_C SINE Alu 7 143 0 29 28 0 0 chr10 30263522 30263558 -115325730 + AT_rich Low_complexity Low_complexity 1 36 0 1932 153 0 16 chr10 30264644 30264957 -115324331 - AluJb SINE Alu -2 310 3 1992 103 70 4 chr10 30264986 30265258 -115324030 + AluSg SINE Alu 1 290 -20 502 191 197 0 chr10 30265502 30265649 -115323639 + MIR SINE MIR 86 261 -1 484 254 7 36 chr10 30266480 30266618 -115322670 + MER94 DNA DNA 1 134 0 2230 91 0 17 chr10 30267376 30267672 -115321616 + AluSx SINE Alu 13 303 -9 1041 102 32 13 chr10 30267724 30267881 -115321407 + AluSp SINE Alu 1 160 -153 1441 88 6 0 chr10 30268006 30268188 -115321100 + AluSp SINE Alu 113 295 -18 437 301 56 50 chr10 30268197 30268601 -115320687 + L1ME4a LINE L1 5562 5964 -157 1516 97 21 13 chr10 30268792 30269030 -115320258 - LTR7 LTR ERV1 0 450 211 2364 86 0 7 chr10 30269037 30269339 -115319949 - AluY SINE Alu -11 300 1 2506 21 45 3 chr10 30269991 30270281 -115319007 + AluY SINE Alu 1 302 -9 288 158 0 0 chr10 30270354 30270411 -115318877 + T-rich Low_complexity Low_complexity 1 57 0 848 140 0 0 chr10 30270412 30270526 -115318762 - AluSq/x SINE Alu -199 114 1 1693 129 0 24 chr10 30270528 30270783 -115318505 - AluSx SINE Alu -16 296 48 2911 160 39 30 chr10 30270783 30271326 -115317962 + MLT2B3 LTR ERVL 1 548 -6 2094 140 0 7 chr10 30271835 30272135 -115317153 - AluSx SINE Alu -14 298 1 1590 139 64 6 chr10 30272176 30272490 -115316798 + L1PA16 LINE L1 5801 6163 0 1073 154 36 64 chr10 30272490 30272710 -115316578 + AluJo SINE Alu 82 295 -17 2359 101 0 0 chr10 30272712 30273019 -115316269 + AluY SINE Alu 1 307 -4 1747 199 3 3 chr10 30273102 30273404 -115315884 + AluJb SINE Alu 3 304 -8 738 129 11 140 chr10 30273494 30273672 -115315616 + MER20 DNA MER1_type 1 155 -64 609 144 0 0 chr10 30273674 30273771 -115315517 + FRAM SINE Alu 69 165 -11 1872 135 50 4 chr10 30274297 30274578 -115314710 - AluSx SINE Alu -18 294 1 1612 182 18 0 chr10 30275307 30275624 -115313664 - AluJo SINE Alu 0 312 13 500 294 31 0 chr10 30275631 30275794 -115313494 - L1ME LINE L1 -303 5818 5651 266 325 11 0 chr10 30276328 30276420 -115312868 + MER5A DNA MER1_type 25 127 -62 892 192 12 12 chr10 30276477 30276649 -115312639 - AluJo SINE Alu -16 296 125 1984 153 3 3 chr10 30276700 30276995 -115312293 - AluSx SINE Alu -17 295 1 260 248 124 66 chr10 30277323 30277444 -115311844 + MLT1I LTR MaLR 279 406 -3 1989 142 34 0 chr10 30277624 30277919 -115311369 + AluSx SINE Alu 1 305 -7 1997 140 3 3 chr10 30278440 30278733 -115310555 + AluSx SINE Alu 1 293 -19 315 0 0 0 chr10 30278738 30278773 -115310515 + (TG)n Simple_repeat Simple_repeat 2 36 0 911 219 45 0 chr10 30278814 30278992 -115310296 - AluJo SINE Alu -92 220 35 243 61 0 0 chr10 30278995 30279028 -115310260 + (TTG)n Simple_repeat Simple_repeat 1 33 0 428 264 25 0 chr10 30279245 30279366 -115309922 - MER113 DNA MER1_type? -64 457 334 2375 111 40 3 chr10 30279455 30279806 -115309482 - THE1B LTR MaLR 0 364 1 2297 113 8 23 chr10 30279806 30280160 -115309128 - Tigger2 DNA MER2_type -29 2689 2341 629 208 8 0 chr10 30280261 30280522 -115308766 + FRAM SINE Alu 56 417 -142 686 71 0 10 chr10 30280522 30280620 -115308668 + (GGAA)n Simple_repeat Simple_repeat 4 100 0 2334 91 3 7 chr10 30280920 30281218 -115308070 - AluSp SINE Alu -12 301 5 1318 158 8 73 chr10 30281222 30281503 -115307785 - AluJb SINE Alu 0 303 40 2325 95 0 0 chr10 30282034 30282328 -115306960 - AluSx SINE Alu -14 298 5 244 269 39 13 chr10 30282654 30282732 -115306556 + MIR3 SINE MIR 78 157 -51 5209 68 43 1 chr10 30282816 30283509 -115305779 - LTR30 LTR ERV1 0 722 1 2390 83 0 10 chr10 30283573 30283875 -115305413 + AluSc SINE Alu 1 299 -10 1219 98 0 11 chr10 30284121 30284295 -115304993 - AluY SINE Alu -12 299 128 1510 213 174 8 chr10 30284414 30284892 -115304396 - L1M4c LINE L1 -2900 3482 2926 1071 192 19 161 chr10 30284916 30285016 -115304272 + MLT1A1 LTR MaLR 1 114 -251 2362 64 0 38 chr10 30285016 30285329 -115303959 - AluY SINE Alu -10 301 1 1071 192 19 161 chr10 30285329 30285650 -115303638 + MLT1A1 LTR MaLR 114 362 -3 2402 72 13 3 chr10 30285655 30285959 -115303329 + AluSp SINE Alu 1 307 -6 1949 212 105 49 chr10 30285968 30286866 -115302422 - L1M4c LINE L1 -4002 2561 1405 2289 101 3 3 chr10 30287290 30287587 -115301701 - AluSp SINE Alu -16 297 1 1695 157 17 20 chr10 30288288 30288587 -115300701 + AluSx SINE Alu 1 298 -14 2441 254 108 25 chr10 30288962 30289133 -115300155 - L2 LINE L2 -287 3026 2871 2281 98 7 3 chr10 30289133 30289440 -115299848 + AluSc SINE Alu 1 308 -1 2441 254 108 25 chr10 30289440 30290367 -115298921 - L2 LINE L2 -442 2871 1826 1912 152 7 3 chr10 30290421 30290711 -115298577 - AluSx SINE Alu -21 291 1 985 170 0 6 chr10 30290718 30290877 -115298411 - FRAM SINE Alu -25 151 1 1766 137 10 17 chr10 30291746 30292039 -115297249 + AluJo SINE Alu 1 291 -21 237 108 0 0 chr10 30293001 30293108 -115296180 + (CGG)n Simple_repeat Simple_repeat 1 107 0 1162 100 18 118 chr10 30293301 30293413 -115295875 + LOR1a LTR ERV1 300 382 -115 2336 78 0 0 chr10 30293413 30293724 -115295564 + AluY SINE Alu 1 311 0 1162 100 18 118 chr10 30293724 30293830 -115295458 + LOR1a LTR ERV1 382 497 0 663 186 7 57 chr10 30294322 30294462 -115294826 + FLAM_A SINE Alu 1 133 0 2227 98 0 0 chr10 30294468 30294745 -115294543 + AluSg1 SINE Alu 1 277 -32 1236 51 17 11 chr10 30294746 30294923 -115294365 + (GAAA)n Simple_repeat Simple_repeat 1 178 0 978 244 96 94 chr10 30295281 30295632 -115293656 + LTR16A LTR ERVL 18 372 -78 5280 83 4 24 chr10 30295632 30295797 -115293491 - L1MA2 LINE L1 -7 6297 6130 2443 51 0 41 chr10 30295797 30296112 -115293176 - AluY SINE Alu -9 302 1 5280 83 4 24 chr10 30296112 30296697 -115292591 - L1MA2 LINE L1 -174 6130 5562 978 244 96 94 chr10 30296697 30296771 -115292517 + LTR16A LTR ERVL 372 444 -6 224 205 0 0 chr10 30297384 30297423 -115291865 + polypurine Low_complexity Low_complexity 3 41 0 2312 122 0 0 chr10 30297453 30297765 -115291523 + AluSx SINE Alu 1 312 0 2285 74 7 17 chr10 30297831 30298129 -115291159 + AluY SINE Alu 1 295 -16 21 0 0 0 chr10 30298268 30298289 -115290999 + AT_rich Low_complexity Low_complexity 1 21 0 1886 150 0 10 chr10 30298819 30299113 -115290175 + AluJo SINE Alu 1 291 -21 2085 129 13 10 chr10 30299464 30299775 -115289513 + AluSx SINE Alu 1 312 0 375 226 0 12 chr10 30299920 30300004 -115289284 + MLT1F1 LTR MaLR 1 83 -484 1892 163 0 10 chr10 30300017 30300323 -115288965 + AluJb SINE Alu 3 305 -7 185 282 181 79 chr10 30300339 30300616 -115288672 + L2 LINE L2 2942 3246 -26 270 0 0 0 chr10 30300929 30300959 -115288329 + (TTTTTG)n Simple_repeat Simple_repeat 2 31 0 557 199 24 12 chr10 30301226 30301392 -115287896 + GA-rich Low_complexity Low_complexity 2 169 0 948 261 79 3 chr10 30301392 30301683 -115287605 - LTR16B LTR ERVL -151 313 1 209 0 97 0 chr10 30302005 30302036 -115287252 + A-rich Low_complexity Low_complexity 2 35 0 772 164 0 0 chr10 30302368 30302496 -115286792 - FLAM_C SINE Alu -4 139 12 245 283 0 0 chr10 30303253 30303306 -115285982 + AluS SINE Alu 5 57 -246 3703 184 68 15 chr10 30303453 30304703 -115284585 + L1MB5 LINE L1 4851 6166 -8 1595 169 108 19 chr10 30304739 30304799 -115284489 - MSTD LTR MaLR -2 394 341 2212 91 3 14 chr10 30304799 30305095 -115284193 + AluSg SINE Alu 1 293 -17 1595 169 108 19 chr10 30305095 30305396 -115283892 - MSTD LTR MaLR -55 341 1 360 331 33 65 chr10 30305397 30305672 -115283616 + L2 LINE L2 2158 2423 -891 508 257 151 18 chr10 30305672 30305890 -115283398 - MIR SINE MIR -12 250 4 403 342 89 0 chr10 30305890 30306091 -115283197 + L2 LINE L2 2423 2641 -673 28 0 0 0 chr10 30306110 30306138 -115283150 + AT_rich Low_complexity Low_complexity 1 28 0 1911 232 164 12 chr10 30306317 30306907 -115282381 + L2 LINE L2 615 1294 -2020 1640 209 8 16 chr10 30306909 30307272 -115282016 - MLT1A1 LTR MaLR -5 360 1 1248 242 60 56 chr10 30307314 30307540 -115281748 + L2 LINE L2 1332 1555 -1759 698 221 118 31 chr10 30307540 30307617 -115281671 + MER58C DNA MER1_type 4 73 -2347 2323 100 7 3 chr10 30307617 30307926 -115281362 - AluSg SINE Alu 0 310 1 698 221 118 31 chr10 30307926 30308043 -115281245 + MER58C DNA MER1_type 73 215 0 1248 242 60 56 chr10 30308043 30308263 -115281025 + L2 LINE L2 1555 1780 -1534 27 0 0 0 chr10 30308265 30308292 -115280996 + AT_rich Low_complexity Low_complexity 1 27 0 399 315 73 12 chr10 30308300 30308465 -115280823 + L2 LINE L2 3138 3312 -1 410 203 0 0 chr10 30308780 30308849 -115280439 + MER5A DNA MER1_type 5 73 -116 826 267 70 18 chr10 30309697 30309899 -115279389 + MLT1J LTR MaLR 22 243 -268 2606 45 0 0 chr10 30309899 30310208 -115279080 - AluY SINE Alu -2 309 1 826 267 70 18 chr10 30310208 30310278 -115279010 + MLT1J LTR MaLR 243 308 -203 2519 44 0 13 chr10 30310527 30310825 -115278463 + AluY SINE Alu 1 294 -17 403 30 0 30 chr10 30310868 30310935 -115278353 + L1PA15 LINE L1 6101 6165 0 21 57 0 19 chr10 30311004 30311025 -115278263 + AT_rich Low_complexity Low_complexity 1 21 -31 2385 67 0 3 chr10 30311025 30311324 -115277964 + AluY SINE Alu 1 298 -13 21 57 0 19 chr10 30311324 30311355 -115277933 + AT_rich Low_complexity Low_complexity 21 52 0 2202 99 10 0 chr10 30311980 30312272 -115277016 - AluSc SINE Alu -14 295 1 356 313 112 33 chr10 30312392 30312606 -115276682 + MIR SINE MIR 2 232 -30 212 222 14 83 chr10 30312941 30313013 -115276275 + MER5B DNA MER1_type 109 175 -3 281 314 73 36 chr10 30313034 30313171 -115276117 + L2 LINE L2 1102 1243 -2071 * 1081 263 116 23 chr10 30313161 30313650 -115275638 - L2 LINE L2 -148 3165 2616 406 249 11 115 chr10 30314018 30314237 -115275051 + MER20B DNA MER1_type 1 202 -17 470 332 56 12 chr10 30314258 30314508 -115274780 + L2 LINE L2 1887 2147 -1167 638 254 12 0 chr10 30314508 30314673 -115274615 + L1M4 LINE L1 1 167 -6375 268 171 46 9 chr10 30314673 30314827 -115274461 + AluSq SINE Alu 1 197 -106 1962 139 10 3 chr10 30314853 30315147 -115274141 + AluSx SINE Alu 2 297 -15 1959 113 13 23 chr10 30316946 30317246 -115272042 + AluSx SINE Alu 1 297 -15 185 154 128 26 chr10 30318598 30318637 -115270651 - L2 LINE L2 -2 3270 3228 2212 112 7 0 chr10 30319288 30319591 -115269697 + AluSx SINE Alu 1 305 -7 1006 197 143 65 chr10 30319595 30319874 -115269414 + AluJo SINE Alu 2 302 0 1927 151 34 3 chr10 30320548 30320846 -115268442 - AluSx SINE Alu -5 307 1 612 100 27 55 chr10 30322404 30322514 -115266774 - AluSg/x SINE Alu 0 312 206 181 296 34 34 chr10 30322598 30322686 -115266602 - MIR SINE MIR -46 216 129 774 324 172 16 chr10 30322743 30323265 -115266023 + L2 LINE L2 2508 3110 -203 241 275 78 56 chr10 30323863 30324005 -115265283 + L2 LINE L2 3150 3294 -19 302 233 27 14 chr10 30324103 30324176 -115265112 - MER5A DNA MER1_type -75 114 41 1012 184 93 48 chr10 30324208 30324518 -115264770 - MER33 DNA MER1_type 0 324 1 1720 149 29 7 chr10 30324890 30325165 -115264123 - AluSx SINE Alu -27 285 5 218 281 247 27 chr10 30325363 30325509 -115263779 + MIR SINE MIR 49 226 -36 2049 93 86 4 chr10 30325768 30326047 -115263241 + AluSx SINE Alu 1 302 -10 276 305 39 39 chr10 30326067 30326195 -115263093 + MER5B DNA MER1_type 2 129 -49 2014 108 42 0 chr10 30326196 30326484 -115262804 + AluSp SINE Alu 1 300 -13 2271 98 0 0 chr10 30328239 30328536 -115260752 + AluSq SINE Alu 1 297 -16 23 33 0 0 chr10 30328859 30328889 -115260399 + AT_rich Low_complexity Low_complexity 1 30 0 2312 99 0 10 chr10 30328896 30329210 -115260078 - AluSq SINE Alu -2 311 1 548 214 56 0 chr10 30329738 30329864 -115259424 + MER3 DNA MER1_type 1 133 -76 1753 191 0 25 chr10 30329869 30330183 -115259105 - AluJb SINE Alu -4 308 3 1903 128 7 20 chr10 30330869 30331167 -115258121 + AluSg SINE Alu 1 294 -16 229 317 147 5 chr10 30332500 30332724 -115256564 + MARNA DNA Mariner 185 440 -146 315 0 0 0 chr10 30332771 30332806 -115256482 + (TG)n Simple_repeat Simple_repeat 2 36 0 2040 108 47 17 chr10 30332806 30333102 -115256186 - AluSx SINE Alu -7 305 1 207 0 0 0 chr10 30333832 30333855 -115255433 + (T)n Simple_repeat Simple_repeat 1 23 0 208 279 0 0 chr10 30333867 30333910 -115255378 + MIR3 SINE MIR 139 181 -27 1540 172 66 30 chr10 30334673 30334858 -115254430 - MER2 DNA MER2_type 0 344 140 1913 148 7 7 chr10 30334858 30335155 -115254133 - AluSx SINE Alu -15 297 1 1540 172 66 30 chr10 30335155 30335301 -115253987 - MER2 DNA MER2_type -204 140 1 236 324 141 25 chr10 30335599 30335949 -115253339 + L2 LINE L2 2647 3070 -202 347 273 27 18 chr10 30335999 30336109 -115253179 + L2 LINE L2 2344 2454 -860 347 244 248 54 chr10 30336114 30336372 -115252916 + L2 LINE L2 2624 2931 -383 1114 151 25 29 chr10 30336374 30336619 -115252669 - MER31A LTR ERV1 -2 483 240 526 190 39 84 chr10 30336619 30336944 -115252344 + MSTD LTR MaLR 1 389 -7 563 160 0 0 chr10 30336944 30337038 -115252250 - MER31A LTR ERV1 -240 245 152 2559 195 58 25 chr10 30337039 30338093 -115251195 - L1M2 LINE L1 -628 5684 4595 1616 191 10 14 chr10 30338400 30338694 -115250594 + AluJb SINE Alu 1 293 -19 2223 121 0 0 chr10 30338779 30339076 -115250212 + AluY SINE Alu 1 297 -14 967 187 87 4 chr10 30339242 30339483 -115249805 - MER93a LTR ERV1 -24 378 118 22 35 0 0 chr10 30339543 30339572 -115249716 + AT_rich Low_complexity Low_complexity 1 29 0 186 342 13 63 chr10 30340040 30340119 -115249169 - L2 LINE L2 -37 3235 3161 261 0 0 0 chr10 30340123 30340152 -115249136 + (TG)n Simple_repeat Simple_repeat 2 30 0 490 261 167 74 chr10 30340176 30340468 -115248820 - L2 LINE L2 -159 3154 2806 1086 211 121 44 chr10 30340468 30340880 -115248408 - LTR56 LTR ERV1 -1 444 1 490 261 167 74 chr10 30340880 30341020 -115248268 - L2 LINE L2 -507 2806 2680 1398 161 23 87 chr10 30341046 30341345 -115247943 + AluJb SINE Alu 1 280 -32 558 228 108 56 chr10 30341370 30341620 -115247668 - L2 LINE L2 -860 2454 2192 386 229 56 49 chr10 30341659 30341803 -115247485 - MER58B DNA MER1_type 0 341 197 622 244 87 87 chr10 30341848 30342159 -115247129 - L2 LINE L2 -1145 2169 1859 1533 148 11 23 chr10 30342635 30342899 -115246389 + MER1B DNA MER1_type 3 263 -76 2086 123 7 7 chr10 30343050 30343342 -115245946 - AluSx SINE Alu -20 292 1 973 115 0 0 chr10 30344061 30344191 -115245097 - AluSq/x SINE Alu -183 130 1 1981 106 3 70 chr10 30344556 30344885 -115244403 - AluSc SINE Alu -2 307 1 1477 157 96 4 chr10 30344981 30345266 -115244022 + AluJb SINE Alu 1 309 0 2319 200 98 35 chr10 30345656 30346341 -115242947 - L1MD2 LINE L1 -20 6339 5612 1146 120 0 18 chr10 30346357 30346524 -115242764 - FRAM SINE Alu -13 163 1 180 257 158 69 chr10 30347135 30347236 -115242052 + L2 LINE L2 3200 3309 -4 844 231 69 71 chr10 30347562 30348125 -115241163 - HAL1b LINE L1 -786 562 1 1677 159 61 14 chr10 30348729 30349024 -115240264 - AluJo SINE Alu -3 309 1 1913 142 0 16 chr10 30349361 30349534 -115239754 - AluSg SINE Alu -6 304 137 1424 58 16 0 chr10 30349534 30349723 -115239565 - L1PA5 LINE L1 -1 6153 5962 1913 142 0 16 chr10 30349723 30349858 -115239430 - AluSg SINE Alu -173 137 1 249 268 125 48 chr10 30351554 30351722 -115237566 - L2 LINE L2 -1 3312 3132 1927 99 99 3 chr10 30351933 30352216 -115237072 - AluSx SINE Alu -2 310 1 22 35 0 0 chr10 30352884 30352913 -115236375 + AT_rich Low_complexity Low_complexity 1 29 0 2266 101 0 0 chr10 30353045 30353341 -115235947 + AluSg SINE Alu 3 298 -12 314 186 105 35 chr10 30353348 30353434 -115235854 - L2 LINE L2 -208 3105 3014 2124 120 3 0 chr10 30353516 30353815 -115235473 + AluSq SINE Alu 1 300 -13 261 155 2 56 chr10 30354135 30354195 -115235093 - FLAM SINE Alu -12 121 72 885 204 40 22 chr10 30354230 30354455 -115234833 - L1MB8 LINE L1 -125 6053 5825 1914 202 65 61 chr10 30354691 30355137 -115234151 - L1MB8 LINE L1 -9 6169 5726 1820 125 50 7 chr10 30355137 30355434 -115233854 - AluSg SINE Alu 0 310 1 1964 139 0 3 chr10 30355442 30355730 -115233558 - AluSx SINE Alu -25 287 1 1914 202 65 61 chr10 30355730 30355829 -115233459 - L1MB8 LINE L1 -458 5720 5613 192 40 0 0 chr10 30355927 30355952 -115233336 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 1321 119 9 22 chr10 30356086 30356313 -115232975 - L1PA16 LINE L1 -7 6159 5936 1503 191 61 16 chr10 30356361 30356778 -115232510 - L1MB8 LINE L1 -570 5608 5172 1838 161 56 3 chr10 30356833 30357155 -115232133 + MER7A DNA MER2_type 10 346 0 236 242 32 16 chr10 30357448 30357510 -115231778 - MER20B DNA MER1_type -352 431 369 268 188 333 21 chr10 30357575 30357671 -115231617 - MER20B DNA MER1_type -435 348 223 936 205 151 0 chr10 30357774 30358033 -115231255 - MER33 DNA MER1_type -25 299 2 185 319 0 42 chr10 30358787 30358859 -115230429 + MER5A DNA MER1_type 4 72 -117 1595 179 21 14 chr10 30358863 30359162 -115230126 + AluSx SINE Alu 1 301 0 2268 203 49 79 chr10 30361821 30362240 -115227048 - MER68 LTR ERV1 -8 554 155 714 178 31 0 chr10 30362240 30362369 -115226919 - FLAM_A SINE Alu 0 133 1 2268 203 49 79 chr10 30362369 30362520 -115226768 - MER68 LTR ERV1 -407 155 1 1873 88 4 31 chr10 30362529 30362816 -115226472 - AluSx SINE Alu 0 312 33 186 291 128 23 chr10 30363263 30363349 -115225939 + L2 LINE L2 2229 2323 -991 192 409 54 21 chr10 30363422 30363608 -115225680 + L2 LINE L2 2552 2743 -571 194 273 91 0 chr10 30364860 30364915 -115224373 - L2 LINE L2 -17 3296 3237 237 381 126 14 chr10 30365030 30365563 -115223725 - L2 LINE L2 -5 3267 2668 1819 114 96 0 chr10 30365796 30366068 -115223220 + AluSx SINE Alu 1 298 -14 325 245 293 0 chr10 30366075 30366287 -115223001 - LTR50 LTR ERVL -43 752 479 409 202 73 18 chr10 30366359 30366468 -115222820 - LTR50 LTR ERVL -666 129 15 186 133 0 0 chr10 30366515 30366545 -115222743 + (T)n Simple_repeat Simple_repeat 1 30 0 1624 158 9 53 chr10 30367384 30367706 -115221582 + AluJo SINE Alu 5 312 0 666 183 0 0 chr10 30367967 30368082 -115221206 + FLAM_A SINE Alu 1 115 -18 1198 169 164 50 chr10 30368119 30368503 -115220785 - Charlie1b DNA MER1_type -94 429 2 230 327 35 26 chr10 30369460 30369573 -115219715 + MIR SINE MIR 34 147 -61 703 109 138 52 chr10 30369723 30369897 -115219391 - L1MA5A LINE L1 -2 6295 6107 1870 162 30 0 chr10 30371025 30371322 -115217966 + AluJb SINE Alu 1 306 -6 21 57 0 0 chr10 30371670 30371705 -115217583 + AT_rich Low_complexity Low_complexity 1 35 0 1491 153 99 11 chr10 30372565 30372847 -115216441 + AluJo SINE Alu 3 309 -3 2118 127 3 3 chr10 30373328 30373628 -115215660 + AluSc SINE Alu 1 300 -9 314 264 81 34 chr10 30373743 30373891 -115215397 - L1ME4a LINE L1 -123 5998 5844 248 286 48 24 chr10 30373919 30374003 -115215285 - L1ME4a LINE L1 -2015 5793 5708 1717 99 144 4 chr10 30374472 30374735 -115214553 + AluSx SINE Alu 1 300 -12 679 197 40 26 chr10 30374884 30375036 -115214252 - MER20B DNA MER1_type -1 218 65 23 54 0 0 chr10 30376357 30376394 -115212894 + AT_rich Low_complexity Low_complexity 1 37 0 605 200 0 0 chr10 30378949 30379054 -115210234 - FLAM_C SINE Alu -38 105 1 320 250 143 0 chr10 30380316 30380400 -115208888 + L2 LINE L2 3207 3302 -11 450 254 113 14 chr10 30381690 30381903 -115207385 + L1M4 LINE L1 5127 5360 -786 3678 198 72 18 chr10 30381910 30383055 -115206233 + L1MB4 LINE L1 4970 6179 -1 1252 123 128 0 chr10 30384127 30384330 -115204958 + MER30 DNA MER1_type 2 230 0 2331 72 0 7 chr10 30384637 30384929 -115204359 + AluY SINE Alu 1 290 -21 474 65 0 0 chr10 30384929 30384991 -115204297 + (TA)n Simple_repeat Simple_repeat 2 63 0 22 70 0 0 chr10 30385065 30385108 -115204180 + AT_rich Low_complexity Low_complexity 1 43 0 1783 146 46 4 chr10 30385436 30385717 -115203571 + AluSx SINE Alu 1 293 -19 201 333 0 0 chr10 30386217 30386265 -115203023 - L3 LINE CR1 -15 1562 1515 217 250 143 93 chr10 30386282 30386422 -115202866 + MER5B DNA MER1_type 29 175 -3 182 265 103 15 chr10 30386454 30386522 -115202766 - MIR SINE MIR -119 143 70 1512 166 63 11 chr10 30387034 30387318 -115201970 - AluJb SINE Alu -9 303 5 193 293 64 71 chr10 30387484 30387624 -115201664 - L3 LINE CR1 -985 592 454 909 271 80 23 chr10 30387676 30388164 -115201124 - L1ME LINE L1 -419 5743 5230 208 275 87 14 chr10 30388915 30388984 -115200304 + MIR SINE MIR 72 145 -117 1739 136 0 4 chr10 30390109 30390367 -115198921 + AluSx SINE Alu 44 300 -12 1297 170 70 4 chr10 30390593 30390822 -115198466 + AluJb SINE Alu 1 244 -68 2184 97 27 7 chr10 30390913 30391211 -115198077 - AluSq SINE Alu -9 304 1 521 151 170 0 chr10 30393987 30394093 -115195195 + FLAM_C SINE Alu 1 124 -9 1424 153 13 4 chr10 30394112 30394348 -115194940 + AluSx SINE Alu 41 278 -34 579 222 90 21 chr10 30394360 30394504 -115194784 + AluJb SINE Alu 140 293 -19 2371 28 43 0 chr10 30395097 30395379 -115193909 - AluY SINE Alu -17 294 1 1446 205 18 7 chr10 30396299 30396582 -115192706 - MARNA DNA Mariner -39 547 262 2012 138 0 16 chr10 30397782 30398086 -115191202 + AluSx SINE Alu 1 299 -13 2275 105 0 3 chr10 30399983 30400288 -115189000 + AluSx SINE Alu 1 304 -8 22 35 0 0 chr10 30400377 30400406 -115188882 + AT_rich Low_complexity Low_complexity 1 29 0 29 0 0 0 chr10 30400431 30400460 -115188828 + AT_rich Low_complexity Low_complexity 1 29 0 27 0 0 0 chr10 30400941 30400968 -115188320 + AT_rich Low_complexity Low_complexity 1 27 0 192 77 0 0 chr10 30402150 30402176 -115187112 + (TTC)n Simple_repeat Simple_repeat 2 27 0 180 0 0 0 chr10 30402202 30402222 -115187066 + (T)n Simple_repeat Simple_repeat 1 20 0 2300 78 3 0 chr10 30402867 30403163 -115186125 - AluSp SINE Alu -16 297 1 195 100 0 0 chr10 30403401 30403431 -115185857 + (C)n Simple_repeat Simple_repeat 1 30 0 491 298 231 18 chr10 30404248 30404755 -115184533 + L2 LINE L2 2184 2798 -516 528 167 115 0 chr10 30404899 30404995 -115184293 + FLAM_C SINE Alu 2 108 -35 255 312 43 11 chr10 30405912 30406005 -115183283 + L2 LINE L2 3208 3303 -10 1012 141 107 5 chr10 30406211 30406417 -115182871 + L1MA5A LINE L1 5382 5608 -689 970 167 0 0 chr10 30406418 30406580 -115182708 + AluSg/x SINE Alu 135 296 -14 2166 138 126 20 chr10 30406580 30407031 -115182257 + L1MA5A LINE L1 5600 6098 -199 1864 94 11 120 chr10 30407036 30407386 -115181902 - AluSx SINE Alu 0 312 1 644 282 40 20 chr10 30408459 30408707 -115180581 - L1MC4 LINE L1 0 8042 7790 2066 119 7 0 chr10 30408707 30409002 -115180286 + AluSx SINE Alu 1 297 -15 605 263 57 99 chr10 30410386 30410521 -115178767 + L2 LINE L2 2945 3084 -229 2223 110 0 0 chr10 30410521 30410829 -115178459 - AluSx SINE Alu -4 308 1 605 263 57 99 chr10 30410829 30411046 -115178242 + L2 LINE L2 3084 3282 -31 1295 180 94 8 chr10 30411046 30411313 -115177975 + AluJo SINE Alu 2 291 -21 605 263 57 99 chr10 30411313 30411343 -115177945 + L2 LINE L2 3282 3312 -1 1703 149 11 4 chr10 30411975 30412283 -115177005 - AluJo SINE Alu 0 310 1 1199 126 23 96 chr10 30412700 30412961 -115176327 + AluJo SINE Alu 71 312 0 293 286 49 94 chr10 30412986 30413101 -115176187 + MIR SINE MIR 47 149 -113 1521 193 20 13 chr10 30413101 30413401 -115175887 - AluJb SINE Alu -10 302 1 293 286 49 94 chr10 30413401 30413509 -115175779 + MIR SINE MIR 149 260 -2 246 128 0 0 chr10 30413972 30414011 -115175277 + (TG)n Simple_repeat Simple_repeat 2 40 0 2196 103 3 0 chr10 30414064 30414376 -115174912 + AluSp SINE Alu 1 313 0 2669 127 16 35 chr10 30414445 30414879 -115174409 - MSTB LTR MaLR 0 426 1 1798 138 32 0 chr10 30415526 30415808 -115173480 - AluSx SINE Alu -21 291 1 1441 243 63 69 chr10 30415808 30416175 -115173113 - L2 LINE L2 -3 3310 2942 1580 151 35 28 chr10 30416175 30416460 -115172828 + AluJo SINE Alu 6 292 -20 1441 243 63 69 chr10 30416460 30416991 -115172297 - L2 LINE L2 -371 2942 2400 2065 135 3 0 chr10 30417236 30417547 -115171741 + AluSx SINE Alu 1 312 0 282 243 29 107 chr10 30418000 30418104 -115171184 - MER94 DNA DNA -1 133 41 2246 99 3 0 chr10 30418104 30418406 -115170882 + AluSx SINE Alu 5 307 -5 282 243 29 107 chr10 30418406 30418441 -115170847 - MER94 DNA DNA -93 41 5 21 0 0 0 chr10 30418965 30418986 -115170302 + AT_rich Low_complexity Low_complexity 1 21 0 1706 148 24 3 chr10 30418986 30419277 -115170011 + AluJo SINE Alu 1 297 -15 210 171 0 0 chr10 30419355 30419390 -115169898 + (TA)n Simple_repeat Simple_repeat 2 36 0 459 253 55 108 chr10 30419433 30419968 -115169320 - L1MC4a LINE L1 -449 5672 5441 3948 161 20 56 chr10 30420169 30420219 -115169069 - L1MB1 LINE L1 -1 6167 6117 2180 99 3 3 chr10 30420219 30420522 -115168766 - AluSq SINE Alu -10 303 1 3948 161 20 56 chr10 30420522 30420831 -115168457 - L1MB1 LINE L1 -51 6117 5798 1886 147 7 0 chr10 30420831 30421130 -115168158 - AluSx SINE Alu -11 301 1 3948 161 20 56 chr10 30421130 30421575 -115167713 - L1MB1 LINE L1 -370 5798 5391 1320 181 50 32 chr10 30421575 30421852 -115167436 + MSTB1 LTR MaLR 1 282 -150 449 289 67 36 chr10 30421864 30422058 -115167230 + MIR SINE MIR 20 219 -43 2031 114 0 26 chr10 30422333 30422639 -115166649 - AluSx SINE Alu -10 302 5 2182 114 10 0 chr10 30423095 30423401 -115165887 + AluSq SINE Alu 1 309 -4 1484 165 71 8 chr10 30423716 30423983 -115165305 + AluJo SINE Alu 1 284 -28 1700 161 0 20 chr10 30424979 30425278 -115164010 + AluJb SINE Alu 1 293 -19 184 337 87 66 chr10 30425278 30425349 -115163939 + L3b LINE CR1 1257 1325 -258 2000 106 17 7 chr10 30425349 30425641 -115163647 - AluSx SINE Alu -16 296 2 184 337 87 66 chr10 30425641 30425765 -115163523 + L3b LINE CR1 1325 1456 -127 1331 195 52 37 chr10 30426674 30426702 -115162586 - L1M4 LINE L1 -3149 2997 2971 1494 182 0 45 chr10 30426702 30426858 -115162430 - AluJo SINE Alu -13 299 162 2160 65 0 68 chr10 30426858 30427181 -115162107 - AluY SINE Alu -10 301 1 1494 182 0 45 chr10 30427181 30427337 -115161951 - AluJo SINE Alu -150 162 1 1331 195 52 37 chr10 30427337 30427419 -115161869 - L1M4 LINE L1 -3175 2971 2892 218 56 28 0 chr10 30427419 30427455 -115161833 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 2127 102 10 0 chr10 30427457 30427752 -115161536 - AluSp SINE Alu -15 298 1 1331 195 52 37 chr10 30427752 30427985 -115161303 - L1M4 LINE L1 -3254 2892 2645 568 156 128 18 chr10 30428018 30428127 -115161161 - FLAM_C SINE Alu -16 127 7 367 236 146 14 chr10 30428142 30428286 -115161002 - L1M4 LINE L1 -3536 2610 2448 6662 134 13 36 chr10 30428355 30429356 -115159932 - L1MA5A LINE L1 0 6297 5367 1925 130 7 0 chr10 30429356 30429648 -115159640 - AluSx SINE Alu -18 294 1 6662 134 13 36 chr10 30429648 30430675 -115158613 - L1MA5A LINE L1 -930 5367 4318 2352 71 0 0 chr10 30430675 30430985 -115158303 + AluY SINE Alu 2 311 0 1903 116 3 27 chr10 30431005 30431298 -115157990 + AluSx SINE Alu 9 294 -18 2150 105 0 0 chr10 30431298 30431603 -115157685 + AluY SINE Alu 1 305 -6 308 239 15 0 chr10 30431606 30431673 -115157615 - MER106A DNA MER1_type -168 68 1 799 265 106 50 chr10 30431683 30432023 -115157265 + L2 LINE L2 2915 3279 -34 2229 102 0 10 chr10 30432023 30432328 -115156960 - AluSp SINE Alu -11 302 1 799 265 106 50 chr10 30432328 30432365 -115156923 + L2 LINE L2 3279 3313 0 2157 103 7 0 chr10 30432504 30432804 -115156484 + AluSq SINE Alu 1 302 -11 2162 88 7 3 chr10 30434217 30434512 -115154776 - AluSx SINE Alu -14 298 3 23 33 0 0 chr10 30434523 30434553 -115154735 + AT_rich Low_complexity Low_complexity 1 30 0 1552 175 3 34 chr10 30434553 30434850 -115154438 - AluJo SINE Alu -24 288 1 2102 93 0 10 chr10 30435122 30435411 -115153877 + AluSx SINE Alu 13 298 -14 1773 77 3 181 chr10 30435966 30436099 -115153189 + AluSx SINE Alu 1 156 -157 4520 42 4 14 chr10 30436099 30436652 -115152636 + SVA Other Other 835 1381 -5 1773 77 3 181 chr10 30436652 30436894 -115152394 + AluSx SINE Alu 156 313 0 228 35 0 0 chr10 30436998 30437027 -115152261 + (TG)n Simple_repeat Simple_repeat 2 30 0 896 159 0 0 chr10 30437334 30437466 -115151822 + AluJo/FLAM SINE Alu 2 133 -169 1968 110 4 0 chr10 30437466 30437747 -115151541 + AluSp SINE Alu 21 302 -11 2443 80 0 0 chr10 30438091 30438402 -115150886 + AluSq SINE Alu 1 311 -2 371 85 34 0 chr10 30438406 30438465 -115150823 + A-rich Low_complexity Low_complexity 4 64 0 2080 112 3 7 chr10 30438477 30438782 -115150506 + AluSx SINE Alu 3 306 -6 237 292 75 74 chr10 30438820 30439076 -115150212 + MIR3 SINE MIR 4 262 0 385 174 14 0 chr10 30439248 30439317 -115149971 + MER5A DNA MER1_type 1 70 -119 2110 128 3 0 chr10 30439364 30439669 -115149619 - AluSx SINE Alu -5 307 2 2342 81 0 0 chr10 30439671 30439969 -115149319 - AluSx SINE Alu -14 298 1 1566 119 56 8 chr10 30440517 30440796 -115148492 + AluSx SINE Alu 21 311 0 810 172 0 8 chr10 30440821 30440955 -115148333 - AluJo SINE Alu -174 138 6 659 214 24 0 chr10 30441093 30441219 -115148069 + MER5A DNA MER1_type 61 189 0 227 340 80 43 chr10 30441334 30441496 -115147792 - MIR3 SINE MIR -23 185 18 2127 181 65 117 chr10 30441664 30441746 -115147542 - LTR8A LTR ERV1 -3 724 639 1946 121 0 0 chr10 30441746 30442019 -115147269 + AluSx SINE Alu 1 273 -39 2127 181 65 117 chr10 30442019 30442699 -115146589 - LTR8A LTR ERV1 -88 639 1 268 237 85 0 chr10 30443270 30443329 -115145959 + MIR SINE MIR 84 147 -61 2118 102 3 3 chr10 30443341 30443635 -115145653 - AluSx SINE Alu -18 294 1 23 0 0 0 chr10 30443637 30443660 -115145628 + AT_rich Low_complexity Low_complexity 1 23 0 1773 174 0 0 chr10 30443660 30443958 -115145330 - AluJb SINE Alu -14 298 1 1396 88 0 88 chr10 30444287 30444538 -115144750 + AluSq SINE Alu 78 308 0 23 0 0 0 chr10 30445266 30445289 -115143999 + AT_rich Low_complexity Low_complexity 1 23 0 1491 188 14 0 chr10 30445289 30445571 -115143717 - AluJo SINE Alu -26 286 1 2051 111 0 23 chr10 30445643 30445949 -115143339 + AluSg SINE Alu 1 299 -11 2342 72 0 0 chr10 30446290 30446582 -115142706 - AluSq SINE Alu -21 292 1 2304 90 6 0 chr10 30446821 30447132 -115142156 + AluSq SINE Alu 1 313 0 336 338 46 7 chr10 30447620 30447771 -115141517 - L3 LINE CR1 -159 1418 1262 383 257 42 69 chr10 30448139 30448283 -115141005 - MIR3 SINE MIR -22 186 47 315 121 52 0 chr10 30448391 30448449 -115140839 + L1ME4a LINE L1 6060 6120 -1 1796 142 14 3 chr10 30448466 30448762 -115140526 + AluSx SINE Alu 11 309 -3 753 165 0 15 chr10 30448772 30448905 -115140383 + FLAM_C SINE Alu 1 131 -2 864 75 0 0 chr10 30448905 30449012 -115140276 + U6 snRNA snRNA 1 107 0 24 0 0 0 chr10 30449815 30449839 -115139449 + GC_rich Low_complexity Low_complexity 1 24 0 200 351 18 0 chr10 30451348 30451405 -115137883 - MIR SINE MIR -113 149 92 453 149 0 0 chr10 30451424 30451736 -115137552 + AluSx SINE Alu 3 314 0 1176 171 9 0 chr10 30451739 30451955 -115137333 + AluJb SINE Alu 84 301 -11 1687 149 0 0 chr10 30452020 30452282 -115137006 - AluSx SINE Alu -40 272 11 1994 125 24 0 chr10 30452819 30453108 -115136180 - AluSx SINE Alu -16 296 1 234 100 0 0 chr10 30453137 30453167 -115136121 + U2 snRNA snRNA 1 30 -158 817 182 14 0 chr10 30453185 30453333 -115135955 - FRAM SINE Alu -17 159 10 600 148 0 0 chr10 30453339 30453427 -115135861 - AluJ/FLAM SINE Alu -223 89 2 207 0 0 0 chr10 30454028 30454051 -115135237 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1165 199 96 4 chr10 30454458 30454719 -115134569 + AluJo SINE Alu 15 299 -13 950 119 6 25 chr10 30454827 30454986 -115134302 + AluJo SINE Alu 7 162 -150 2238 63 7 7 chr10 30456616 30456919 -115132369 + AluSg SINE Alu 3 305 -5 180 125 0 0 chr10 30458430 30458462 -115130826 + (CGGGG)n Simple_repeat Simple_repeat 3 34 0 24 32 0 0 chr10 30458850 30458881 -115130407 + GC_rich Low_complexity Low_complexity 1 31 0 251 341 0 0 chr10 30459516 30459683 -115129605 + (TG)n Simple_repeat Simple_repeat 2 168 0 2216 87 10 0 chr10 30464697 30464986 -115124302 + AluSg SINE Alu 1 292 -18 349 167 15 0 chr10 30465288 30465354 -115123934 - AluSg/x SINE Alu -26 274 208 1422 115 5 5 chr10 30465405 30465613 -115123675 - AluSq SINE Alu -105 208 1 280 259 36 98 chr10 30466983 30467095 -115122193 + MIR SINE MIR 79 183 -79 249 33 0 0 chr10 30468511 30468541 -115120747 + (TG)n Simple_repeat Simple_repeat 1 30 0 192 229 0 0 chr10 30469010 30469045 -115120243 + L2 LINE L2 3149 3183 -89 2144 102 3 0 chr10 30469804 30470099 -115119189 - AluSp SINE Alu -4 309 14 1286 155 68 8 chr10 30470176 30470427 -115118861 - AluJo SINE Alu -46 266 1 473 194 0 11 chr10 30470441 30470534 -115118754 - FLAM_C SINE Alu -18 125 34 27 62 0 0 chr10 30470656 30470704 -115118584 + AT_rich Low_complexity Low_complexity 1 48 0 1179 228 3 14 chr10 30470773 30471062 -115118226 - L1MA4 LINE L1 -11 6289 6004 1741 166 0 13 chr10 30471994 30472296 -115116992 - AluJb SINE Alu -14 298 1 1103 141 131 5 chr10 30472330 30472529 -115116759 + MSTA LTR MaLR 1 224 -204 240 163 0 0 chr10 30472533 30472576 -115116712 + C-rich Low_complexity Low_complexity 4 46 0 609 133 33 20 chr10 30472595 30472745 -115116543 + CT-rich Low_complexity Low_complexity 3 154 0 957 158 133 20 chr10 30472762 30472965 -115116323 + MSTA LTR MaLR 203 428 0 443 217 157 0 chr10 30472989 30473104 -115116184 + MIR SINE MIR 27 159 -103 958 142 6 24 chr10 30473109 30473278 -115116010 - FRAM SINE Alu 0 40 1 314 127 18 0 chr10 30473302 30473357 -115115931 + MIR SINE MIR 169 224 -38 2355 79 7 0 chr10 30473504 30473807 -115115481 + AluSx SINE Alu 1 305 -7 1716 161 0 3 chr10 30474268 30474554 -115114734 + AluJb SINE Alu 1 285 -27 2255 111 0 0 chr10 30474648 30474955 -115114333 + AluSx SINE Alu 1 307 -5 1830 149 13 20 chr10 30475049 30475351 -115113937 + AluJo SINE Alu 1 300 -12 2043 132 3 0 chr10 30475789 30476093 -115113195 - AluSx SINE Alu -3 309 5 1055 128 13 0 chr10 30476130 30476286 -115113002 - AluJb SINE Alu -25 287 130 21 36 0 0 chr10 30476532 30476560 -115112728 + AT_rich Low_complexity Low_complexity 1 28 0 1800 157 3 10 chr10 30477125 30477430 -115111858 + AluJo SINE Alu 9 311 -1 660 191 7 29 chr10 30477473 30477609 -115111679 - AluSq/x SINE Alu -178 134 2 2105 110 7 3 chr10 30477946 30478254 -115111034 - AluSp SINE Alu -4 309 1 2117 107 7 0 chr10 30478451 30478740 -115110548 - AluSx SINE Alu -18 294 4 1825 146 3 19 chr10 30479735 30480043 -115109245 - AluJo SINE Alu -9 303 1 926 127 0 0 chr10 30480104 30480238 -115109050 - AluSg/x SINE Alu -45 265 132 2080 121 7 0 chr10 30480238 30480535 -115108753 - AluSx SINE Alu -13 299 1 188 286 14 29 chr10 30480692 30480762 -115108526 + L3 LINE CR1 1404 1472 -105 1989 64 0 0 chr10 30480897 30481146 -115108142 - AluY SINE Alu -6 305 57 256 360 0 0 chr10 30481217 30481292 -115107996 + MER5C DNA MER1_type 9 83 -241 488 138 0 0 chr10 30481298 30481378 -115107910 - MADE1 DNA Mariner 0 80 1 1891 117 60 0 chr10 30481381 30481663 -115107625 - AluSx SINE Alu -13 299 1 386 82 0 0 chr10 30481663 30481712 -115107576 - MSTB LTR MaLR -372 54 6 1592 170 7 24 chr10 30482525 30482819 -115106469 - AluJo SINE Alu -18 294 6 2097 124 0 13 chr10 30482901 30483216 -115106072 - AluSx SINE Alu -1 311 1 2212 92 7 0 chr10 30483492 30483785 -115105503 - AluSc SINE Alu -14 295 1 1712 179 0 19 chr10 30484110 30484422 -115104866 - AluJo SINE Alu -6 306 1 1977 128 3 0 chr10 30484525 30484823 -115104465 + AluSq SINE Alu 1 299 -14 1646 171 0 7 chr10 30485002 30485301 -115103987 + AluJb SINE Alu 14 310 -2 279 343 97 6 chr10 30486015 30486190 -115103098 - MIR3 SINE MIR -6 202 12 * 908 223 66 0 chr10 30486163 30486360 -115102928 + MIR SINE MIR 53 262 0 2137 90 0 10 chr10 30486736 30487035 -115102253 - AluSx SINE Alu -16 296 1 944 180 0 27 chr10 30487234 30487417 -115101871 - FRAM SINE Alu -3 173 1 719 174 0 36 chr10 30487423 30487600 -115101688 - FLAM_C SINE Alu 0 172 1 2208 101 0 0 chr10 30487812 30488108 -115101180 - AluSx SINE Alu -16 296 1 33 56 0 0 chr10 30488108 30488162 -115101126 + AT_rich Low_complexity Low_complexity 1 54 0 1965 113 0 4 chr10 30488176 30488442 -115100846 - AluSg SINE Alu -45 265 1 39 0 0 20 chr10 30488442 30488478 -115100810 + AT_rich Low_complexity Low_complexity 1 37 -12 1810 155 0 7 chr10 30488478 30488769 -115100519 - AluJo SINE Alu -23 289 1 39 0 0 20 chr10 30488769 30488782 -115100506 + AT_rich Low_complexity Low_complexity 37 49 0 216 256 39 13 chr10 30488986 30489064 -115100224 + (TTGGGG)n Simple_repeat Simple_repeat 1 80 0 224 313 229 21 chr10 30489286 30489364 -115099924 + MIR SINE MIR 89 149 -113 2316 71 7 7 chr10 30489364 30489673 -115099615 + AluSx SINE Alu 1 309 -3 224 313 229 21 chr10 30489673 30489738 -115099550 + MIR SINE MIR 149 262 0 207 0 0 0 chr10 30490829 30490852 -115098436 + (TTAA)n Simple_repeat Simple_repeat 4 26 0 1892 121 25 0 chr10 30490852 30491133 -115098155 - AluSq SINE Alu -25 288 1 375 304 74 7 chr10 30491261 30491409 -115097879 - MIR3 SINE MIR -49 159 2 2089 100 0 0 chr10 30492481 30492760 -115096528 + AluSx SINE Alu 27 305 -7 401 177 13 0 chr10 30492836 30492915 -115096373 - AluJo SINE Alu -3 309 230 948 185 45 6 chr10 30492916 30493094 -115096194 - AluJo SINE Alu -127 185 1 246 261 28 61 chr10 30493177 30493357 -115095931 - L1ME4a LINE L1 -21 6100 5927 244 97 0 0 chr10 30493370 30493401 -115095887 + MLT1A1 LTR MaLR 1 31 -334 685 174 0 72 chr10 30493401 30493539 -115095749 - FLAM_A SINE Alu -5 128 1 724 162 0 0 chr10 30493539 30493650 -115095638 - AluJo/FLAM SINE Alu -188 124 14 1786 173 21 27 chr10 30493658 30493993 -115095295 + MLT1A1 LTR MaLR 33 365 0 1629 176 3 20 chr10 30494003 30494305 -115094983 - AluJo SINE Alu -15 297 1 185 368 0 0 chr10 30494410 30494486 -115094802 + MIR SINE MIR 20 95 -167 1054 116 0 0 chr10 30494532 30494678 -115094610 + AluSg SINE Alu 1 146 -164 181 267 13 40 chr10 30494810 30494885 -115094403 + L3 LINE CR1 617 689 -888 1257 153 14 0 chr10 30495087 30495302 -115093986 - AluJb SINE Alu -8 304 87 1442 196 0 7 chr10 30496879 30497149 -115092139 - AluJb SINE Alu -20 292 25 1651 198 96 8 chr10 30497691 30498055 -115091233 + MSTD LTR MaLR 1 396 0 822 152 0 41 chr10 30498128 30498273 -115091015 - FLAM_C SINE Alu 0 143 5 282 206 194 45 chr10 30498530 30498685 -115090603 + MIR SINE MIR 35 212 -50 461 327 47 68 chr10 30498707 30498964 -115090324 + L2 LINE L2 2937 3198 -74 982 200 21 109 chr10 30498964 30498978 -115090310 - AluJo SINE Alu -1 301 287 927 109 0 0 chr10 30498978 30499116 -115090172 + (TTCC)n Simple_repeat Simple_repeat 3 140 0 982 200 21 109 chr10 30499116 30499431 -115089857 - AluJo SINE Alu -15 287 1 269 26 0 26 chr10 30499431 30499470 -115089818 + (TTTTA)n Simple_repeat Simple_repeat 5 42 0 1946 121 0 4 chr10 30499470 30499751 -115089537 - AluSx SINE Alu -32 280 1 461 327 47 68 chr10 30499751 30499830 -115089458 + L2 LINE L2 3195 3268 -4 1640 202 0 0 chr10 30500068 30500360 -115088928 + AluJb SINE Alu 6 297 -15 183 42 0 0 chr10 30500388 30500412 -115088876 + (TTG)n Simple_repeat Simple_repeat 1 24 0 595 273 82 6 chr10 30500912 30501095 -115088193 + MIR SINE MIR 15 211 -51 1274 133 10 0 chr10 30501128 30501324 -115087964 - AluJo SINE Alu -11 301 104 1859 105 0 14 chr10 30501324 30501601 -115087687 + AluSx SINE Alu 37 309 -3 288 264 28 0 chr10 30501649 30501721 -115087567 - MIR SINE MIR -2 260 187 2283 112 0 3 chr10 30504341 30504644 -115084644 + AluSg SINE Alu 1 302 -8 22 35 0 0 chr10 30504733 30504762 -115084526 + AT_rich Low_complexity Low_complexity 1 29 0 29 0 0 0 chr10 30504787 30504816 -115084472 + AT_rich Low_complexity Low_complexity 1 29 0 27 0 0 0 chr10 30505297 30505324 -115083964 + AT_rich Low_complexity Low_complexity 1 27 0 517 129 0 59 chr10 30506050 30506151 -115083137 + AluSg/x SINE Alu 218 312 0 195 183 26 174 chr10 30506193 30506263 -115083025 - MIR SINE MIR -2 260 212 1905 164 7 0 chr10 30506263 30506568 -115082720 - AluJb SINE Alu -5 307 1 195 183 26 174 chr10 30506568 30506612 -115082676 - MIR SINE MIR -50 212 163 22 0 0 0 chr10 30507517 30507539 -115081749 + AT_rich Low_complexity Low_complexity 1 22 0 2287 84 3 3 chr10 30509016 30509329 -115079959 - AluSp SINE Alu 0 313 1 1801 174 3 19 chr10 30509349 30509666 -115079622 - AluJb SINE Alu 0 312 1 732 74 0 11 chr10 30510536 30510631 -115078657 - AluY SINE Alu -179 132 39 2236 128 0 0 chr10 30510653 30510951 -115078337 - AluSx SINE Alu -14 298 1 1663 177 30 7 chr10 30510978 30511277 -115078011 + AluJo SINE Alu 1 306 -6 2261 123 0 0 chr10 30512373 30512674 -115076614 - AluSx SINE Alu -11 301 1 1977 117 75 34 chr10 30512894 30513252 -115076036 + THE1C LTR MaLR 1 373 -2 210 269 268 0 chr10 30514217 30514311 -115074977 - MIR SINE MIR -75 133 47 1676 186 3 31 chr10 30514316 30514634 -115074654 + AluJo SINE Alu 1 309 -3 2238 106 27 0 chr10 30514643 30514944 -115074344 + AluSg SINE Alu 1 309 -1 2241 87 32 23 chr10 30515220 30515530 -115073758 + AluSq SINE Alu 1 313 0 187 0 88 29 chr10 30516221 30516255 -115073033 + CT-rich Low_complexity Low_complexity 5 40 0 2209 100 17 0 chr10 30516269 30516559 -115072729 - AluSx SINE Alu -17 295 1 257 0 30 0 chr10 30516574 30516607 -115072681 + (TTTTC)n Simple_repeat Simple_repeat 1 34 0 1057 122 6 6 chr10 30516622 30516802 -115072486 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2027 160 0 0 chr10 30516824 30517131 -115072157 - AluSx SINE Alu -5 307 1 1719 169 3 10 chr10 30517214 30517510 -115071778 - AluJb SINE Alu -18 294 1 1131 257 78 50 chr10 30517544 30518296 -115070992 - L2 LINE L2 0 3313 2535 2387 95 0 3 chr10 30518296 30518600 -115070688 - AluSx SINE Alu -9 303 1 1131 257 78 50 chr10 30518600 30518677 -115070611 - L2 LINE L2 -778 2535 2462 992 28 14 14 chr10 30518864 30519006 -115070282 + (TCTA)n Simple_repeat Simple_repeat 3 144 0 229 152 13 101 chr10 30519272 30519351 -115069937 - L1P LINE L1 -3098 3048 2977 354 323 83 6 chr10 30519801 30519986 -115069302 - MIR SINE MIR -54 154 1 2257 103 17 0 chr10 30520000 30520301 -115068987 - AluSq SINE Alu -7 306 1 509 222 28 0 chr10 30520565 30520673 -115068615 - MIR SINE MIR -146 116 6 1763 146 0 32 chr10 30520925 30521229 -115068059 + AluJo SINE Alu 12 306 0 971 142 26 7 chr10 30521624 30521779 -115067509 - LTR26E LTR ERV1 0 622 465 211 150 33 0 chr10 30521809 30521869 -115067419 + (TA)n Simple_repeat Simple_repeat 1 62 0 682 144 9 9 chr10 30521916 30522027 -115067261 - AluJo SINE Alu -117 195 85 2285 129 10 50 chr10 30522027 30522429 -115066859 - LTR26B LTR ERV1 -145 386 1 2993 132 16 0 chr10 30522565 30523006 -115066282 + MER83 LTR ERV1 1 448 0 981 193 0 0 chr10 30523159 30523335 -115065953 + FRAM SINE Alu 1 174 -2 858 278 93 10 chr10 30523630 30523932 -115065356 + LTR33A LTR ERVL 1 327 -196 492 206 0 0 chr10 30523970 30524062 -115065226 + LTR33A LTR ERVL 419 510 -13 180 305 211 33 chr10 30524253 30524830 -115064458 - L2 LINE L2 -674 2640 1961 2961 112 7 2 chr10 30524831 30525261 -115064027 + MER57B LTR ERV1 3 434 0 796 151 7 7 chr10 30525698 30525850 -115063438 + CT-rich Low_complexity Low_complexity 3 154 0 2267 100 7 0 chr10 30525852 30526152 -115063136 - AluSx SINE Alu -2 310 9 310 208 25 138 chr10 30526739 30526898 -115062390 - MER5B DNA MER1_type -4 174 34 5180 151 49 36 chr10 30526957 30527581 -115061707 + L1MA9 LINE L1 5160 5774 -538 2111 126 3 0 chr10 30527581 30527890 -115061398 - AluSx SINE Alu 0 310 1 5180 151 49 36 chr10 30527890 30528242 -115061046 + L1MA9 LINE L1 5774 6120 -192 387 0 0 0 chr10 30528242 30528285 -115061003 + (CA)n Simple_repeat Simple_repeat 1 43 0 5180 151 49 36 chr10 30528285 30528405 -115060883 + L1MA9 LINE L1 6120 6270 -42 1510 210 28 3 chr10 30528405 30528691 -115060597 - AluJo SINE Alu -11 301 9 5180 151 49 36 chr10 30528691 30528721 -115060567 + L1MA9 LINE L1 6270 6298 -14 749 112 28 98 chr10 30528795 30528938 -115060350 - FLAM_C SINE Alu 0 133 1 334 259 62 0 chr10 30529794 30529875 -115059413 - L2 LINE L2 -2 3311 3226 2574 170 70 20 chr10 30529918 30530472 -115058816 + MER34C LTR ERV1 1 582 -3 423 275 46 51 chr10 30530575 30530780 -115058508 - L2 LINE L2 -234 3079 2875 2839 143 53 42 chr10 30530780 30531305 -115057983 - LTR26B LTR ERV1 0 531 1 423 275 46 51 chr10 30531305 30531384 -115057904 - L2 LINE L2 -438 2875 2797 1991 229 45 46 chr10 30531405 30531975 -115057313 + MER77 LTR ERV1 54 601 -4 318 245 11 43 chr10 30532012 30532106 -115057182 - L2 LINE L2 -513 2801 2711 199 54 54 0 chr10 30532106 30532143 -115057145 + (TA)n Simple_repeat Simple_repeat 2 40 0 30498 92 7 21 chr10 30532143 30532615 -115056673 - L1PA7 LINE L1 -6 6463 5986 2335 88 0 3 chr10 30532615 30532910 -115056378 - AluSc SINE Alu -13 296 3 30498 92 7 21 chr10 30532910 30536440 -115052848 - L1PA7 LINE L1 -483 5986 2557 2369 95 0 0 chr10 30536440 30536734 -115052554 - AluSq SINE Alu -19 294 1 30498 92 7 21 chr10 30536734 30538111 -115051177 - L1PA7 LINE L1 -3912 2557 1162 659 124 0 0 chr10 30538109 30538198 -115051090 - L1PA7 LINE L1 -6365 96 8 * 1888 142 7 33 chr10 30538209 30538511 -115050777 - AluJo SINE Alu -18 294 1 638 287 102 20 chr10 30538511 30538863 -115050425 - L2 LINE L2 -600 2714 2334 828 167 8 0 chr10 30538892 30539024 -115050264 - FLAM_C SINE Alu 0 133 1 257 94 0 0 chr10 30539126 30539179 -115050109 - LTR66 LTR ERVL -163 447 395 1193 157 4 68 chr10 30539668 30539903 -115049385 - AluJb SINE Alu -8 304 85 809 176 0 0 chr10 30539982 30540107 -115049181 - FLAM_A SINE Alu -8 125 1 63 44 0 0 chr10 30541233 30541324 -115047964 + AT_rich Low_complexity Low_complexity 1 91 0 228 163 31 62 chr10 30541332 30541461 -115047827 + (TTATA)n Simple_repeat Simple_repeat 2 126 0 2126 114 0 0 chr10 30541912 30542192 -115047096 - AluSg SINE Alu -30 280 1 2121 122 3 3 chr10 30543293 30543588 -115045700 - AluSx SINE Alu -17 295 1 23 0 0 0 chr10 30543904 30543927 -115045361 + AT_rich Low_complexity Low_complexity 1 23 0 254 226 73 48 chr10 30543928 30544052 -115045236 - L1MC5 LINE L1 -36 7925 7799 784 260 91 21 chr10 30544164 30544449 -115044839 + L1ME LINE L1 5260 5564 -600 1817 179 3 3 chr10 30544449 30544750 -115044538 + AluJb SINE Alu 1 301 -11 2256 121 0 0 chr10 30544830 30545135 -115044153 + AluSq SINE Alu 1 305 -8 2051 130 3 0 chr10 30545225 30545518 -115043770 + AluSx SINE Alu 16 309 -3 1830 209 61 2 chr10 30545848 30546241 -115043047 - MER90 LTR ERV1 -20 594 179 742 98 49 0 chr10 30546239 30546341 -115042947 - U6 snRNA snRNA 0 107 1 * 1045 210 5 10 chr10 30546339 30546544 -115042744 - MER90 LTR ERV1 -410 204 1 904 268 74 43 chr10 30546587 30546938 -115042350 - MLT1J LTR MaLR -7 504 143 256 311 33 25 chr10 30549849 30549971 -115039317 - MIR3 SINE MIR -32 176 54 25 31 0 0 chr10 30550038 30550070 -115039218 + AT_rich Low_complexity Low_complexity 1 32 0 2157 135 3 0 chr10 30550070 30550373 -115038915 + AluSx SINE Alu 1 304 -8 1169 178 5 0 chr10 30550498 30550689 -115038599 + AluJb SINE Alu 89 280 -32 1688 180 34 17 chr10 30551727 30552083 -115037205 - MLT1A1 LTR MaLR -3 362 1 2213 122 0 0 chr10 30552174 30552469 -115036819 - AluY SINE Alu -16 295 1 2043 83 0 24 chr10 30555326 30555652 -115033636 - AluY SINE Alu 0 319 1 1564 185 17 3 chr10 30555655 30555947 -115033341 - AluJo SINE Alu -16 296 1 2384 86 0 9 chr10 30556117 30556432 -115032856 - AluSq SINE Alu -1 312 1 189 0 0 0 chr10 30556643 30556664 -115032624 + (TCTCCC)n Simple_repeat Simple_repeat 5 25 0 9183 60 10 110 chr10 30556681 30558219 -115031069 + SVA Other Other 2 1385 -1 22 0 0 0 chr10 30558219 30558241 -115031047 + AT_rich Low_complexity Low_complexity 1 22 0 804 160 0 8 chr10 30558688 30558813 -115030475 + FLAM_C SINE Alu 1 124 -9 2679 96 14 14 chr10 30558832 30559196 -115030092 + THE1B LTR MaLR 1 364 0 890 173 23 12 chr10 30559196 30559369 -115029919 + FRAM SINE Alu 2 176 0 1903 141 138 23 chr10 30560305 30560689 -115028599 + MSTA LTR MaLR 1 428 0 469 253 81 81 chr10 30560728 30560949 -115028339 + HAL1 LINE L1 863 1083 -1424 635 107 0 0 chr10 30560951 30561035 -115028253 - AluJ SINE Alu -21 291 208 821 132 0 96 chr10 30561036 30561084 -115028204 - AluJ SINE Alu -161 151 100 2304 150 68 5 chr10 30561084 30561483 -115027805 - MSTA LTR MaLR 0 428 5 821 132 0 96 chr10 30561483 30561601 -115027687 - AluJ SINE Alu -212 100 1 874 178 0 0 chr10 30561602 30561752 -115027536 - MER5A DNA MER1_type -36 153 4 645 332 0 23 chr10 30561768 30561985 -115027303 + MIR SINE MIR 51 262 0 1416 148 65 7 chr10 30562166 30562443 -115026845 + AluJb SINE Alu 3 295 -17 1610 179 10 14 chr10 30562985 30563282 -115026006 + AluJb SINE Alu 1 296 -16 1054 159 0 0 chr10 30563797 30563967 -115025321 - FRAM SINE Alu -5 171 2 261 83 0 0 chr10 30565035 30565071 -115024217 + (CA)n Simple_repeat Simple_repeat 2 37 0 235 216 21 72 chr10 30565091 30565188 -115024100 - L1MC4 LINE L1 -1337 6705 6614 2324 168 0 57 chr10 30565197 30565267 -115024021 - Tigger2a DNA MER2_type -2274 434 362 1905 126 0 23 chr10 30565267 30565568 -115023720 - AluSx SINE Alu -18 294 1 2217 91 0 0 chr10 30565578 30565874 -115023414 - AluSq SINE Alu -16 297 2 2324 168 0 57 chr10 30565874 30566251 -115023037 - Tigger2a DNA MER2_type -2355 353 2 2037 92 4 0 chr10 30566425 30566686 -115022602 - MLT2A2 LTR ERVL -191 262 1 1445 196 112 16 chr10 30566686 30566997 -115022291 - MLT1D LTR MaLR -163 342 2 451 51 17 0 chr10 30567034 30567093 -115022195 + MADE1 DNA Mariner 3 62 -18 365 113 0 0 chr10 30567091 30567144 -115022144 + MADE1 DNA Mariner 28 80 0 * 1597 158 3 34 chr10 30567276 30567587 -115021701 + AluJo SINE Alu 1 302 0 1578 187 0 16 chr10 30567665 30567970 -115021318 - AluJo SINE Alu -12 300 1 208 333 71 0 chr10 30568388 30568472 -115020816 - MIR3 SINE MIR -11 197 108 362 158 53 26 chr10 30569110 30569186 -115020102 - MER58B DNA MER1_type -1 340 263 1692 158 3 7 chr10 30569202 30569493 -115019795 - AluJo SINE Alu -22 290 1 1431 41 0 0 chr10 30569520 30569690 -115019598 - AluY SINE Alu -18 293 124 394 141 295 0 chr10 30569702 30569780 -115019508 - MER58B DNA MER1_type -235 106 6 511 238 9 103 chr10 30569790 30570004 -115019284 - L2 LINE L2 -555 2759 2566 531 297 83 21 chr10 30571498 30571690 -115017598 - MIR SINE MIR -5 257 54 482 218 59 0 chr10 30571968 30572069 -115017219 - ORSL DNA AcHobo 0 275 169 403 335 18 36 chr10 30572379 30572546 -115016742 - MIR3 SINE MIR -24 184 21 29 47 0 0 chr10 30572898 30572941 -115016347 + AT_rich Low_complexity Low_complexity 1 43 0 3128 157 34 12 chr10 30572962 30573244 -115016044 - L1PA16 LINE L1 -9 6157 5883 1656 151 11 4 chr10 30573244 30573543 -115015745 + AluJb SINE Alu 3 303 0 3128 157 34 12 chr10 30573543 30573819 -115015469 - L1PA16 LINE L1 -283 5883 5586 553 229 8 0 chr10 30575427 30575545 -115013743 + MER94 DNA DNA 15 133 -1 24 0 0 0 chr10 30578429 30578453 -115010835 + AT_rich Low_complexity Low_complexity 1 24 0 423 265 124 80 chr10 30578531 30578958 -115010330 - L1ME4a LINE L1 -77 6044 5599 2157 188 8 48 chr10 30579097 30579540 -115009748 + MLT2B3 LTR ERVL 1 374 -146 1208 181 20 138 chr10 30579569 30579730 -115009558 + AluYb8 SINE Alu 1 101 -207 2096 114 3 0 chr10 30579730 30580020 -115009268 - AluSx SINE Alu -21 291 1 1208 181 20 138 chr10 30580020 30580206 -115009082 + AluYb8 SINE Alu 101 307 -1 181 365 144 19 chr10 30580324 30580532 -115008756 + L2 LINE L2 2381 2614 -700 894 123 0 36 chr10 30580799 30580937 -115008351 + FLAM_C SINE Alu 1 133 0 1142 176 22 36 chr10 30580974 30581196 -115008092 - MER20 DNA MER1_type 0 219 1 185 296 123 0 chr10 30581202 30581283 -115008005 + L2 LINE L2 2767 2857 -457 700 256 59 29 chr10 30581503 30581776 -115007512 - MLT1J1 LTR MaLR -165 281 1 22 0 0 0 chr10 30582011 30582033 -115007255 + AT_rich Low_complexity Low_complexity 1 22 0 2283 93 7 0 chr10 30582376 30582686 -115006602 + AluSx SINE Alu 1 312 0 323 270 0 0 chr10 30582802 30582876 -115006412 + AluJ/FLAM SINE Alu 1 74 -228 617 165 0 0 chr10 30582878 30582975 -115006313 + AluJb SINE Alu 190 286 -26 279 0 0 0 chr10 30582978 30583009 -115006279 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 1475 192 0 35 chr10 30583116 30583429 -115005859 + AluJo SINE Alu 1 302 -10 1491 153 102 4 chr10 30584578 30584852 -115004436 + AluJo SINE Alu 3 303 -9 2226 86 0 0 chr10 30584873 30585163 -115004125 + AluSx SINE Alu 1 290 -22 292 197 13 40 chr10 30586626 30586702 -115002586 + (CATATA)n Simple_repeat Simple_repeat 3 76 0 1639 163 14 17 chr10 30586733 30587027 -115002261 - AluJo SINE Alu -19 293 1 362 238 0 0 chr10 30587059 30587139 -115002149 + MIR3 SINE MIR 82 161 -47 195 388 0 0 chr10 30587491 30587576 -115001712 + L3 LINE CR1 400 484 -1093 1567 147 4 47 chr10 30587992 30588271 -115001017 + AluJo SINE Alu 1 267 -45 1680 204 70 103 chr10 30588587 30589220 -115000068 + LTR9 LTR ERV1 1 612 0 28 29 0 0 chr10 30589492 30589527 -114999761 + AT_rich Low_complexity Low_complexity 1 35 0 2297 62 0 3 chr10 30589680 30589971 -114999317 - AluY SINE Alu -1 310 21 1866 140 7 0 chr10 30590000 30590300 -114998988 + AluSx SINE Alu 3 304 -8 1684 139 76 0 chr10 30590939 30591227 -114998061 - L1MA2 LINE L1 -4 6300 5991 876 133 0 15 chr10 30591227 30591362 -114997926 - AluJo/FRAM SINE Alu -46 266 134 1543 148 6 88 chr10 30591363 30591694 -114997594 - AluSg SINE Alu -6 304 1 423 0 0 0 chr10 30592066 30592113 -114997175 + (CA)n Simple_repeat Simple_repeat 2 48 0 274 83 0 0 chr10 30594181 30594217 -114995071 - L2 LINE L2 -6 3307 3272 423 304 7 0 chr10 30594988 30595136 -114994152 + L1ME4a LINE L1 5971 6119 -2 1996 122 0 3 chr10 30597042 30597338 -114991950 - AluSx SINE Alu -17 295 1 4128 139 19 2 chr10 30597357 30597981 -114991307 + MER41B LTR ERV1 1 635 0 202 298 43 0 chr10 30597987 30598034 -114991254 + L2 LINE L2 3262 3310 -3 754 196 74 12 chr10 30598102 30598265 -114991023 + FRAM SINE Alu 4 176 0 421 154 22 0 chr10 30598303 30598394 -114990894 + GA-rich Low_complexity Low_complexity 3 95 0 249 274 14 60 chr10 30599067 30599200 -114990088 + L1MC4a LINE L1 4489 4610 -1536 2150 179 18 18 chr10 30599200 30599596 -114989692 - MSTD LTR MaLR 0 396 1 249 274 14 60 chr10 30599596 30599677 -114989611 + L1MC4a LINE L1 4610 4693 -1453 1560 171 20 43 chr10 30599678 30599982 -114989306 - AluJo SINE Alu -15 297 1 2026 120 3 0 chr10 30600041 30600332 -114988956 + AluSg SINE Alu 1 292 -18 305 294 28 28 chr10 30600378 30600487 -114988801 + L1MC4a LINE L1 5217 5325 -821 2299 109 3 0 chr10 30600566 30600888 -114988400 - pTR5 LTR ERV1 -2041 397 75 297 198 55 63 chr10 30600888 30601021 -114988267 - LTR30 LTR ERV1 -94 606 375 3258 165 61 32 chr10 30601021 30601782 -114987506 - pTR5 LTR ERV1 -439 1999 6 515 261 79 62 chr10 30601847 30602138 -114987150 + L1MC4a LINE L1 5530 5825 -1983 1929 112 54 3 chr10 30602143 30602438 -114986850 + AluSx SINE Alu 1 310 -2 1359 116 98 5 chr10 30602510 30602734 -114986554 + AluSx SINE Alu 60 304 -8 214 162 0 0 chr10 30602862 30602899 -114986389 + (TG)n Simple_repeat Simple_repeat 1 37 0 233 233 17 0 chr10 30603223 30603283 -114986005 + L1 LINE L1 5221 5281 -865 2439 54 40 0 chr10 30603511 30603808 -114985480 - AluY SINE Alu -2 309 1 2618 96 53 50 chr10 30604805 30604957 -114984331 - LTR56 LTR ERV1 0 445 295 2313 83 21 3 chr10 30604957 30605247 -114984041 + AluSc SINE Alu 1 295 -14 2618 96 53 50 chr10 30605247 30605531 -114983757 - LTR56 LTR ERV1 -150 295 8 30 59 0 0 chr10 30605997 30606048 -114983240 + AT_rich Low_complexity Low_complexity 1 51 0 22 35 0 0 chr10 30606060 30606089 -114983199 + AT_rich Low_complexity Low_complexity 1 29 0 1518 166 0 4 chr10 30606171 30606418 -114982870 - AluJo SINE Alu -9 303 58 1112 166 19 9 chr10 30606451 30606662 -114982626 - L1PA16 LINE L1 -12 6154 5942 1862 159 0 30 chr10 30607089 30607385 -114981903 + AluJo SINE Alu 1 287 -25 408 20 0 0 chr10 30607385 30607434 -114981854 + (CATA)n Simple_repeat Simple_repeat 2 50 0 255 191 0 0 chr10 30608815 30608878 -114980410 + CT-rich Low_complexity Low_complexity 2 64 0 229 253 242 22 chr10 30609633 30609815 -114979473 + L1ME3A LINE L1 2400 2621 -3525 183 222 0 0 chr10 30609841 30609886 -114979402 + (TATG)n Simple_repeat Simple_repeat 3 47 0 315 299 13 0 chr10 30609955 30610032 -114979256 - MER2 DNA MER2_type 0 345 268 204 170 21 21 chr10 30610041 30610088 -114979200 + A-rich Low_complexity Low_complexity 4 50 0 1247 129 5 15 chr10 30610107 30610308 -114978980 - MER2 DNA MER2_type -134 211 13 958 295 144 18 chr10 30610356 30610441 -114978847 + L1ME3A LINE L1 2797 2870 -3276 2579 68 0 0 chr10 30610441 30610749 -114978539 + AluSq SINE Alu 1 308 -5 958 295 144 18 chr10 30610749 30611919 -114977369 + L1ME3A LINE L1 2870 4256 -1890 459 247 151 89 chr10 30611946 30612238 -114977050 - LTR33 LTR ERVL 0 521 248 396 0 0 0 chr10 30612238 30612282 -114977006 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 1856 131 0 7 chr10 30612291 30612566 -114976722 - AluSx SINE Alu -39 273 1 2292 117 0 0 chr10 30612572 30612879 -114976409 - AluSx SINE Alu -5 307 1 459 247 151 89 chr10 30612879 30613054 -114976234 - LTR33 LTR ERVL -284 237 7 960 249 56 108 chr10 30613130 30613285 -114976003 + L1ME3A LINE L1 4495 4657 -1489 2055 111 50 0 chr10 30613285 30613565 -114975723 - AluSx SINE Alu -10 302 9 960 249 56 108 chr10 30613565 30614233 -114975055 + L1ME3A LINE L1 4657 5275 -871 995 274 53 12 chr10 30614309 30614648 -114974640 + L1ME3A LINE L1 5276 5628 -534 340 135 0 0 chr10 30614648 30614700 -114974588 + MER116 DNA Mariner 29 80 0 363 265 89 56 chr10 30614701 30615023 -114974265 + L1ME3A LINE L1 5641 5975 -195 2046 128 3 26 chr10 30615312 30615618 -114973670 + AluSx SINE Alu 1 299 -13 199 133 133 83 chr10 30615801 30615861 -114973427 + L2 LINE L2 3246 3308 -5 234 284 59 10 chr10 30615870 30615972 -114973316 + L1ME LINE L1 5373 5479 -2329 263 247 0 52 chr10 30616189 30616266 -114973022 + L1ME LINE L1 5746 5818 -303 2373 81 0 13 chr10 30616333 30616640 -114972648 - AluY SINE Alu -8 303 1 2084 130 0 7 chr10 30617361 30617660 -114971628 - AluSx SINE Alu -15 297 1 1776 130 0 11 chr10 30618245 30618507 -114970781 + AluJb SINE Alu 40 298 -14 1687 100 0 9 chr10 30618664 30618893 -114970395 - AluSc SINE Alu 0 309 83 40 0 0 0 chr10 30619671 30619711 -114969577 + AT_rich Low_complexity Low_complexity 1 40 0 1810 159 40 10 chr10 30620309 30620487 -114968801 - AluJo SINE Alu -1 311 119 195 42 0 0 chr10 30620487 30620511 -114968777 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1810 159 40 10 chr10 30620511 30620634 -114968654 - AluJo SINE Alu -193 119 1 536 198 0 37 chr10 30621736 30622108 -114967180 + CT-rich Low_complexity Low_complexity 1 180 0 295 229 0 0 chr10 30622108 30622169 -114967119 - AluJo SINE Alu 0 673 241 1426 154 13 21 chr10 30622282 30622515 -114966773 - AluJo SINE Alu -81 231 1 1683 188 4 0 chr10 30622947 30623224 -114966064 + AluJb SINE Alu 3 280 -32 741 162 31 12 chr10 30623224 30623466 -114965822 + GA-rich Low_complexity Low_complexity 1 246 0 1515 133 34 19 chr10 30623988 30624251 -114965037 + L1MA6 LINE L1 6034 6300 0 1627 185 7 7 chr10 30624367 30624643 -114964645 - AluJo SINE Alu -36 276 1 279 0 0 0 chr10 30625164 30625195 -114964093 + (A)n Simple_repeat Simple_repeat 1 31 0 1573 132 64 39 chr10 30625896 30626176 -114963112 - AluJo SINE Alu -15 297 11 1517 200 22 0 chr10 30627416 30627691 -114961597 + AluJb SINE Alu 1 281 -31 359 250 23 0 chr10 30628404 30628492 -114960796 + L1MC4 LINE L1 6614 6703 -1339 222 118 0 0 chr10 30628495 30628529 -114960759 + (TA)n Simple_repeat Simple_repeat 1 34 0 2199 112 0 3 chr10 30628529 30628823 -114960465 - AluSx SINE Alu -19 293 1 259 274 113 116 chr10 30629446 30629826 -114959462 - L2 LINE L2 -131 3182 2804 1673 253 37 16 chr10 30629933 30630443 -114958845 - L2 LINE L2 -685 2629 2109 758 295 114 47 chr10 30630447 30630698 -114958590 - L2 LINE L2 -2477 837 604 3668 153 25 2 chr10 30630698 30631287 -114958001 - LTR26 LTR ERV1 0 603 1 758 295 114 47 chr10 30631287 30631432 -114957856 - L2 LINE L2 -2710 604 470 2407 94 0 0 chr10 30631432 30631730 -114957558 + AluSc SINE Alu 1 298 -11 758 295 114 47 chr10 30631730 30631970 -114957318 - L2 LINE L2 -2844 470 157 868 187 28 16 chr10 30632662 30632844 -114956444 - AluJo SINE Alu -11 301 118 259 128 0 0 chr10 30632858 30632897 -114956391 - MER65B LTR ERV1 -492 39 1 369 200 36 27 chr10 30633000 30633110 -114956178 + L2 LINE L2 2435 2545 -769 1000 136 0 0 chr10 30633116 30633256 -114956032 + FRAM SINE Alu 1 140 -36 545 167 0 0 chr10 30633256 30633346 -114955942 - AluJ/FLAM SINE Alu -221 91 2 1023 329 96 7 chr10 30633347 30633901 -114955387 + HERV16 LTR ERVL 151 753 -4243 519 277 99 0 chr10 30634040 30634181 -114955107 + HERV16 LTR ERVL 910 1064 -3932 433 257 71 0 chr10 30634230 30634343 -114954945 + HERV16 LTR ERVL 1150 1270 -3726 2114 142 3 0 chr10 30634496 30634791 -114954497 + AluSx SINE Alu 1 296 -16 854 279 66 4 chr10 30634805 30635049 -114954239 + HERV16 LTR ERVL 1686 1944 -3052 713 309 115 26 chr10 30635074 30635543 -114953745 + LTR16B LTR ERVL 8 462 -2 1928 141 7 3 chr10 30636852 30637135 -114952153 + AluJb SINE Alu 18 301 -11 2123 107 7 7 chr10 30637202 30637500 -114951788 - AluSc SINE Alu -7 302 5 226 252 101 25 chr10 30638646 30638761 -114950527 + MLT1L LTR MaLR 135 258 -357 1030 244 115 65 chr10 30638761 30639257 -114950031 + LTR33 LTR ERVL 1 521 0 514 310 83 20 chr10 30639257 30639557 -114949731 + MLT1L LTR MaLR 252 570 -45 1573 174 28 25 chr10 30639601 30639883 -114949405 - AluJo SINE Alu -25 287 5 180 77 0 0 chr10 30640196 30640222 -114949066 + (TG)n Simple_repeat Simple_repeat 2 27 0 22 80 0 0 chr10 30640688 30640738 -114948550 + AT_rich Low_complexity Low_complexity 1 50 0 1800 175 0 7 chr10 30640901 30641192 -114948096 - AluJo SINE Alu -23 289 1 1881 156 0 31 chr10 30641793 30642113 -114947175 + AluJb SINE Alu 1 310 -2 266 260 16 57 chr10 30642161 30642284 -114947004 + MIR SINE MIR 74 191 -71 183 331 58 16 chr10 30642700 30642942 -114946346 + L2 LINE L2 2510 2761 -553 1285 290 133 37 chr10 30643160 30643204 -114946084 + L2 LINE L2 1423 1461 -1853 2092 125 0 23 chr10 30643204 30643507 -114945781 - AluSx SINE Alu -16 296 1 1285 290 133 37 chr10 30643507 30643958 -114945330 + L2 LINE L2 1461 1867 -1447 2077 136 10 0 chr10 30643958 30644267 -114945021 - AluSx SINE Alu 0 312 1 1285 290 133 37 chr10 30644267 30644843 -114944445 + L2 LINE L2 1867 2598 -716 204 125 0 0 chr10 30644845 30644877 -114944411 + (TTC)n Simple_repeat Simple_repeat 2 33 0 454 239 26 17 chr10 30645006 30645123 -114944165 + MIR3 SINE MIR 83 200 -8 2305 74 0 0 chr10 30645353 30645676 -114943612 - AluY SINE Alu 0 323 1 442 260 49 16 chr10 30645950 30646073 -114943215 - L2 LINE L2 0 3313 3187 1024 182 51 14 chr10 30646215 30646429 -114942859 - L1MA9 LINE L1 -153 6159 5938 470 118 40 0 chr10 30646429 30646504 -114942784 + L1MA9 LINE L1 6234 6312 0 2462 74 3 0 chr10 30646657 30646955 -114942333 + AluY SINE Alu 1 299 -12 2083 112 21 0 chr10 30647865 30648151 -114941137 - AluSx SINE Alu -8 304 13 769 214 14 0 chr10 30648366 30648511 -114940777 - Tigger3(Golem) DNA MER2_type -2 3027 2881 2211 93 3 7 chr10 30648545 30648847 -114940441 - AluY SINE Alu -7 304 4 236 279 156 39 chr10 30648992 30649146 -114940142 + MER3 DNA MER1_type 2 126 -83 247 204 0 19 chr10 30649359 30649413 -114939875 + (CA)n Simple_repeat Simple_repeat 1 53 0 2931 7 0 0 chr10 30650140 30650450 -114938838 - AluY SINE Alu -1 310 1 318 220 0 0 chr10 30650488 30650588 -114938700 + (TG)n Simple_repeat Simple_repeat 1 100 0 823 121 0 0 chr10 30651334 30651450 -114937838 + FLAM_C SINE Alu 20 135 -8 21 57 0 0 chr10 30651457 30651492 -114937796 + AT_rich Low_complexity Low_complexity 1 35 0 2211 100 28 0 chr10 30651504 30651793 -114937495 + AluSg SINE Alu 3 299 -11 364 217 7 28 chr10 30652038 30652181 -114937107 + T-rich Low_complexity Low_complexity 3 142 0 22 35 0 0 chr10 30652345 30652374 -114936914 + AT_rich Low_complexity Low_complexity 1 29 0 202 122 73 0 chr10 30652470 30652511 -114936777 + (TATG)n Simple_repeat Simple_repeat 1 44 0 1018 178 0 6 chr10 30653527 30653696 -114935592 + FRAM SINE Alu 1 161 -15 1373 102 5 5 chr10 30654809 30655005 -114934283 - AluSg/x SINE Alu 0 312 117 677 233 133 89 chr10 30655053 30655396 -114933892 - MER34 LTR ERV1 0 542 167 1939 137 0 7 chr10 30655396 30655695 -114933593 + AluSx SINE Alu 1 297 -15 677 233 133 89 chr10 30655695 30655870 -114933418 - MER34 LTR ERV1 -375 167 1 1353 151 5 0 chr10 30656082 30656294 -114932994 + AluSx SINE Alu 1 213 -99 691 286 44 18 chr10 30657319 30657546 -114931742 + MIR SINE MIR 28 260 -2 4491 51 7 0 chr10 30657603 30658154 -114931134 - L1PA7 LINE L1 -4 6150 5596 1431 159 11 30 chr10 30658798 30659062 -114930226 + AluJo SINE Alu 18 276 -36 180 0 0 0 chr10 30659067 30659087 -114930201 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 234 276 66 0 chr10 30659099 30659175 -114930113 + MER5A DNA MER1_type 52 132 -57 2106 109 10 3 chr10 30659221 30659523 -114929765 - AluSc SINE Alu -5 304 1 1650 136 110 4 chr10 30661698 30661970 -114927318 + AluSx SINE Alu 1 301 -11 5053 185 140 104 chr10 30662413 30664107 -114925181 - MER52A LTR ERV1 0 1755 1 367 340 79 46 chr10 30664785 30665088 -114924200 + L1MC4a LINE L1 4369 4681 -1465 355 287 92 8 chr10 30665100 30665351 -114923937 + L1MC4a LINE L1 4742 5013 -1133 2061 133 0 0 chr10 30665364 30665665 -114923623 + AluSx SINE Alu 1 301 -11 476 283 23 40 chr10 30665719 30666072 -114923216 + L1MC5 LINE L1 7581 7927 -34 764 179 0 0 chr10 30666075 30666198 -114923090 + FLAM_C SINE Alu 2 124 -19 1994 123 7 0 chr10 30666210 30666510 -114922778 + AluSx SINE Alu 1 302 -10 315 259 60 43 chr10 30666510 30666617 -114922671 + L1MC4a LINE L1 5028 5139 -1007 204 138 46 0 chr10 30666649 30666714 -114922574 + (TA)n Simple_repeat Simple_repeat 2 69 0 555 244 249 41 chr10 30666846 30667301 -114921987 + L1MC4a LINE L1 5297 5403 -743 1214 125 87 168 chr10 30667403 30667549 -114921739 - MER44D DNA MER2_type -1882 609 453 1494 194 0 14 chr10 30667549 30667833 -114921455 + AluJo SINE Alu 1 280 -32 1214 125 87 168 chr10 30667833 30667895 -114921393 - MER44D DNA MER2_type -2038 453 388 1855 116 0 72 chr10 30667895 30668215 -114921073 + AluSx SINE Alu 1 297 -15 1214 125 87 168 chr10 30668215 30668374 -114920914 - MER44D DNA MER2_type -2103 388 1 2229 95 0 0 chr10 30669421 30669715 -114919573 - AluSq SINE Alu -19 294 1 22 0 0 0 chr10 30669725 30669747 -114919541 + AT_rich Low_complexity Low_complexity 1 22 0 278 310 100 0 chr10 30670690 30670790 -114918498 - MIR SINE MIR -150 112 3 484 245 37 31 chr10 30671926 30672089 -114917199 - MER5B DNA MER1_type -13 165 2 865 215 6 0 chr10 30672214 30672386 -114916902 + FRAM SINE Alu 1 172 -4 2080 110 0 19 chr10 30672702 30673010 -114916278 + AluSx SINE Alu 1 302 -10 2331 157 96 26 chr10 30674015 30674513 -114914775 - L1MB3 LINE L1 0 6183 5651 1379 218 200 43 chr10 30674571 30674719 -114914569 - MER50 LTR ERV1 -19 715 592 1898 93 72 0 chr10 30674719 30674997 -114914291 + AluSx SINE Alu 1 298 -14 1379 218 200 43 chr10 30674997 30675458 -114913830 - MER50 LTR ERV1 -142 592 10 1832 149 0 7 chr10 30675931 30676226 -114913062 - AluJo SINE Alu -15 297 5 2147 135 28 38 chr10 30677524 30677562 -114911726 - L1MC1 LINE L1 -15 6318 6281 1855 173 0 0 chr10 30677562 30677868 -114911420 + AluJb SINE Alu 1 306 -6 2147 135 28 38 chr10 30677868 30678086 -114911202 - L1MC1 LINE L1 -52 6281 6065 1584 165 71 9 chr10 30678086 30678426 -114910862 - MER46B DNA MER2_type 0 236 1 2147 135 28 38 chr10 30678426 30678560 -114910728 - L1MC1 LINE L1 -268 6065 5931 2014 138 0 3 chr10 30680145 30680450 -114908838 - AluSx SINE Alu -8 304 1 443 195 195 0 chr10 30681286 30681409 -114907879 + L2 LINE L2 3167 3313 0 2385 71 3 3 chr10 30682223 30682532 -114906756 - AluSg1 SINE Alu 0 309 1 1014 191 92 97 chr10 30683168 30683634 -114905654 - MER4C LTR ERV1 0 465 2 2604 96 14 3 chr10 30685206 30685570 -114903718 - L1PA13 LINE L1 -2 6161 5794 471 114 0 0 chr10 30685888 30685967 -114903321 + L1MA5A LINE L1 6214 6292 -5 1349 184 25 22 chr10 30686776 30686900 -114902388 + AluJb SINE Alu 4 126 -186 1506 186 72 0 chr10 30686900 30687191 -114902097 + AluJb SINE Alu 1 312 0 1349 184 25 22 chr10 30687191 30687343 -114901945 + AluJb SINE Alu 126 281 -31 2253 174 22 26 chr10 30687555 30688014 -114901274 - LTR32 LTR ERVL 0 471 15 1948 131 0 7 chr10 30688662 30688959 -114900329 + AluJb SINE Alu 1 295 -17 1587 160 29 11 chr10 30689488 30689805 -114899483 - AluJo SINE Alu 0 324 3 542 176 9 19 chr10 30690021 30690129 -114899159 - L1MB3 LINE L1 -8 6175 6069 202 235 118 35 chr10 30690229 30690314 -114898974 + L3 LINE CR1 1365 1456 -121 1103 113 40 17 chr10 30690319 30690496 -114898792 + MER4D LTR ERV1 1 181 -722 5365 123 12 10 chr10 30690496 30691302 -114897986 + L1PA15 LINE L1 5350 6157 -8 3360 141 65 73 chr10 30691302 30691998 -114897290 + MER4D LTR ERV1 183 872 0 3145 122 8 112 chr10 30692613 30693254 -114896034 + MER4B LTR ERV1 1 574 -36 536 237 0 52 chr10 30693692 30693827 -114895461 + L2 LINE L2 3180 3307 -6 192 307 0 67 chr10 30693832 30693907 -114895381 + L2 LINE L2 3133 3202 -70 200 182 0 0 chr10 30694734 30694767 -114894521 + CT-rich Low_complexity Low_complexity 2 34 0 354 45 0 0 chr10 30694770 30694814 -114894474 + (CA)n Simple_repeat Simple_repeat 2 45 0 2237 112 0 0 chr10 30695280 30695584 -114893704 - AluSx SINE Alu -8 304 1 218 296 57 23 chr10 30695823 30695911 -114893377 + L2 LINE L2 2954 3044 -228 1537 185 14 20 chr10 30696023 30696320 -114892968 - AluJo SINE Alu -17 295 1 393 169 60 0 chr10 30696325 30696408 -114892880 - L1PA16 LINE L1 0 6166 6079 988 160 0 11 chr10 30696498 30696679 -114892609 + AluJb SINE Alu 134 312 0 206 31 0 31 chr10 30696986 30697018 -114892270 + (TTTG)n Simple_repeat Simple_repeat 4 34 0 1971 115 4 0 chr10 30697018 30697297 -114891991 - AluSx SINE Alu -32 280 1 3729 111 23 6 chr10 30697642 30698157 -114891131 + MER1A DNA MER1_type 4 527 0 1488 152 17 52 chr10 30698501 30698790 -114890498 + AluJo SINE Alu 2 280 -32 3474 101 8 10 chr10 30699912 30700406 -114888882 - LOR1a LTR ERV1 0 497 5 1353 228 37 34 chr10 30700704 30701002 -114888286 - AluJo SINE Alu -2 300 2 2011 191 50 46 chr10 30701097 30701600 -114887688 + MLT1D LTR MaLR 1 505 0 242 238 262 0 chr10 30701754 30701838 -114887450 + L2 LINE L2 3208 3313 0 1618 170 17 17 chr10 30701883 30702172 -114887116 - AluJb SINE Alu -23 289 1 1789 121 83 78 chr10 30702415 30702614 -114886674 + THE1C LTR MaLR 1 204 -171 225 0 0 0 chr10 30702614 30702639 -114886649 + (TC)n Simple_repeat Simple_repeat 1 25 0 1789 121 83 78 chr10 30702639 30702812 -114886476 + THE1C LTR MaLR 204 375 0 1956 128 0 0 chr10 30703006 30703319 -114885969 + AluSx SINE Alu 1 313 0 316 360 84 27 chr10 30703321 30703582 -114885706 - L2 LINE L2 -20 3252 2977 226 280 20 0 chr10 30703582 30703632 -114885656 - L2 LINE L2 -12 3260 3210 22 0 0 0 chr10 30703640 30703662 -114885626 + AT_rich Low_complexity Low_complexity 1 22 0 745 168 0 0 chr10 30703717 30703836 -114885452 - AluJb SINE Alu -1 311 193 1035 245 32 0 chr10 30703891 30704107 -114885181 - MER58A DNA MER1_type -1 223 1 1834 178 3 3 chr10 30706082 30706386 -114882902 - AluJo SINE Alu -7 305 2 734 282 61 69 chr10 30706531 30707273 -114882015 + L2 LINE L2 2539 3283 -30 2277 115 0 0 chr10 30707446 30707741 -114881547 + AluSx SINE Alu 1 295 -17 380 127 0 0 chr10 30707965 30708020 -114881268 - Alu SINE Alu -6 296 242 2088 221 74 46 chr10 30708293 30708349 -114880939 - L1ME1 LINE L1 -5 6161 6108 1709 183 7 17 chr10 30708349 30708650 -114880638 - AluJo SINE Alu -14 298 1 2088 221 74 46 chr10 30708650 30709244 -114880044 - L1ME1 LINE L1 -58 6108 5493 662 62 0 0 chr10 30709246 30709327 -114879961 - THE1B LTR MaLR 0 364 284 474 54 0 0 chr10 30709327 30709383 -114879905 - THE1B LTR MaLR -308 56 1 1249 165 0 19 chr10 30710000 30710206 -114879082 + AluJb SINE Alu 1 202 -110 2291 85 3 0 chr10 30710393 30710706 -114878582 - AluY SINE Alu 0 314 1 1703 139 68 25 chr10 30710968 30711249 -114878039 - AluJo SINE Alu -6 306 14 243 229 0 0 chr10 30711482 30711543 -114877745 + (TATG)n Simple_repeat Simple_repeat 3 63 0 1805 98 124 0 chr10 30712568 30712833 -114876455 + AluSx SINE Alu 5 302 0 1875 151 0 7 chr10 30713107 30713391 -114875897 - AluJo SINE Alu -30 282 1 198 0 0 0 chr10 30713419 30713441 -114875847 + (TG)n Simple_repeat Simple_repeat 2 23 0 191 303 0 15 chr10 30713980 30714046 -114875242 - L2 LINE L2 -214 3058 2994 804 172 0 8 chr10 30714299 30714433 -114874855 + FLAM_C SINE Alu 1 133 0 2343 94 0 0 chr10 30715078 30715376 -114873912 - AluSc SINE Alu -11 298 1 1707 168 18 4 chr10 30715659 30715933 -114873355 - AluJb SINE Alu -34 278 1 1626 178 34 20 chr10 30715933 30716226 -114873062 - AluJo SINE Alu -15 297 1 1673 186 10 10 chr10 30717481 30717788 -114871500 - AluJb SINE Alu -5 307 1 183 143 29 0 chr10 30718739 30718774 -114870514 + MER5A DNA MER1_type 1 36 -153 215 269 104 0 chr10 30718974 30719041 -114870247 - L2 LINE L2 -1 3312 3239 521 278 44 28 chr10 30719119 30719299 -114869989 + MIR SINE MIR 6 188 -74 2401 156 44 29 chr10 30719379 30719833 -114869455 - LOR1b LTR ERV1 0 461 1 898 180 4 146 chr10 30720024 30720094 -114869194 + L1MB8 LINE L1 3909 3987 -2159 2057 112 41 0 chr10 30720094 30720388 -114868900 + AluSc SINE Alu 1 306 -3 898 180 4 146 chr10 30720388 30720563 -114868725 + L1MB8 LINE L1 3987 4119 -2027 2815 178 34 38 chr10 30720563 30720586 -114868702 + MLT2B3 LTR ERVL 1 23 -531 2270 180 36 79 chr10 30720586 30721165 -114868123 + MLT2B3 LTR ERVL 1 554 0 2815 178 34 38 chr10 30721165 30721697 -114867591 + MLT2B3 LTR ERVL 23 554 0 4540 189 56 37 chr10 30721699 30722753 -114866535 + L1MB8 LINE L1 4117 5149 -1029 2193 134 132 5 chr10 30722753 30723133 -114866155 - MSTA LTR MaLR 0 428 1 761 163 23 0 chr10 30723133 30723262 -114866026 + FLAM_C SINE Alu 1 132 -1 4540 189 56 37 chr10 30723262 30724219 -114865069 + L1MB8 LINE L1 5148 6165 -13 255 31 0 0 chr10 30724224 30724256 -114865032 + (TG)n Simple_repeat Simple_repeat 2 33 0 553 284 209 48 chr10 30724282 30724613 -114864675 - L2 LINE L2 -799 2515 2239 279 0 0 0 chr10 30724613 30724644 -114864644 + (GA)n Simple_repeat Simple_repeat 2 32 0 553 284 209 48 chr10 30724644 30724957 -114864331 - L2 LINE L2 -1075 2239 1767 1085 195 108 16 chr10 30725331 30725582 -114863706 - AluJo SINE Alu -25 287 14 2180 172 34 3 chr10 30726116 30726500 -114862788 - MSTD LTR MaLR 0 396 1 1550 172 0 69 chr10 30727088 30727407 -114861881 - AluJo SINE Alu -15 297 1 216 0 0 0 chr10 30728268 30728292 -114860996 + (T)n Simple_repeat Simple_repeat 1 24 0 237 33 0 0 chr10 30728609 30728639 -114860649 + (CA)n Simple_repeat Simple_repeat 2 31 0 228 163 0 0 chr10 30728917 30728960 -114860328 + A-rich Low_complexity Low_complexity 1 43 0 414 217 104 26 chr10 30730131 30730246 -114859042 - L2 LINE L2 -2 3311 3188 2146 125 0 0 chr10 30730680 30730976 -114858312 - AluSx SINE Alu -16 296 1 686 175 0 0 chr10 30731563 30731683 -114857605 - AluSg/x SINE Alu 0 312 193 2143 123 0 7 chr10 30733278 30733571 -114855717 + AluSx SINE Alu 1 291 -21 2036 125 25 0 chr10 30733795 30734147 -114855141 - AluSx SINE Alu 0 359 1 2012 114 11 0 chr10 30734658 30734975 -114854313 - AluSq SINE Alu 0 320 1 795 131 31 15 chr10 30735008 30735138 -114854150 - FLAM_C SINE Alu -1 132 1 24 32 0 0 chr10 30735201 30735232 -114854056 + AT_rich Low_complexity Low_complexity 1 31 0 2248 111 10 0 chr10 30736497 30736794 -114852494 + AluSq SINE Alu 1 300 -13 2235 119 3 0 chr10 30736795 30737098 -114852190 + AluSc SINE Alu 1 304 -5 646 233 0 0 chr10 30737175 30737308 -114851980 + FLAM_A SINE Alu 6 138 -4 2235 100 0 13 chr10 30737784 30738084 -114851204 - AluSq SINE Alu -17 296 1 2056 192 54 18 chr10 30738084 30738524 -114850764 - L1MD1 LINE L1 -7 6235 5777 1016 241 98 50 chr10 30738533 30738757 -114850531 - L1MD1 LINE L1 -1185 4961 4749 2223 96 0 26 chr10 30738757 30739059 -114850229 - AluSx SINE Alu -16 296 3 1016 241 98 50 chr10 30739059 30739155 -114850133 - L1MD1 LINE L1 -1397 4749 4659 1565 186 7 24 chr10 30739155 30739474 -114849814 + AluJb SINE Alu 1 314 0 1016 241 98 50 chr10 30739474 30739571 -114849717 - L1MD1 LINE L1 -1487 4659 4522 206 121 0 0 chr10 30741883 30741916 -114847372 + (TTTTTG)n Simple_repeat Simple_repeat 4 36 0 313 282 77 51 chr10 30742819 30742975 -114846313 + MER20B DNA MER1_type 5 164 -619 2304 98 0 16 chr10 30743114 30743420 -114845868 - AluSg SINE Alu -8 302 2 207 0 0 0 chr10 30743509 30743532 -114845756 + (TG)n Simple_repeat Simple_repeat 2 24 0 2298 119 0 3 chr10 30743853 30744164 -114845124 - AluSx SINE Alu -1 311 2 2290 106 0 0 chr10 30744577 30744878 -114844410 - AluSg SINE Alu -9 301 1 1107 83 0 0 chr10 30744878 30745011 -114844277 - AluSg SINE Alu -177 133 1 340 289 66 90 chr10 30746303 30746383 -114842905 - MIR SINE MIR 0 262 182 1615 154 41 41 chr10 30746383 30746675 -114842613 - AluJo SINE Alu -18 294 3 340 289 66 90 chr10 30746675 30746850 -114842438 - MIR SINE MIR -80 182 13 276 218 115 0 chr10 30746910 30746997 -114842291 - MER5A DNA MER1_type -84 105 9 1623 178 10 17 chr10 30750376 30750668 -114838620 - AluJo SINE Alu -22 290 1 2108 116 3 3 chr10 30750938 30751231 -114838057 - AluSq SINE Alu -20 293 1 2559 56 0 31 chr10 30751246 30751567 -114837721 - AluY SINE Alu 0 311 1 203 235 20 0 chr10 30752223 30752274 -114837014 - MIR3 SINE MIR -32 176 125 22 0 0 0 chr10 30752578 30752600 -114836688 + AT_rich Low_complexity Low_complexity 1 22 0 954 160 89 0 chr10 30752754 30752967 -114836321 - L1 LINE L1 -1593 4553 4322 4083 90 3 7 chr10 30752969 30753536 -114835752 + L1PB2 LINE L1 5586 6150 -1 2278 108 0 0 chr10 30753544 30753839 -114835449 + AluSc SINE Alu 1 295 -14 1608 183 0 4 chr10 30753877 30754145 -114835143 + AluJo SINE Alu 1 267 -45 24 0 0 0 chr10 30754161 30754185 -114835103 + AT_rich Low_complexity Low_complexity 1 24 0 236 170 0 94 chr10 30756309 30756415 -114832873 + (ACATG)n Simple_repeat Simple_repeat 4 99 0 2236 77 32 3 chr10 30756727 30757012 -114832276 + AluSx SINE Alu 1 293 -19 186 133 0 0 chr10 30757123 30757153 -114832135 + (TAA)n Simple_repeat Simple_repeat 2 31 0 26 30 0 0 chr10 30757170 30757203 -114832085 + AT_rich Low_complexity Low_complexity 1 33 0 924 128 19 6 chr10 30757512 30757668 -114831620 + L1PA16 LINE L1 6005 6162 -4 2149 146 3 0 chr10 30757929 30758238 -114831050 - AluJb SINE Alu 0 312 3 256 267 89 11 chr10 30758699 30758789 -114830499 - L2 LINE L2 -6 3266 3170 189 107 0 0 chr10 30761139 30761167 -114828121 + (TTA)n Simple_repeat Simple_repeat 2 29 0 183 184 0 0 chr10 30761820 30761858 -114827430 + CT-rich Low_complexity Low_complexity 4 41 0 243 61 0 0 chr10 30761868 30761901 -114827387 + (CA)n Simple_repeat Simple_repeat 2 34 0 417 39 0 0 chr10 30761901 30761952 -114827336 + (TCCA)n Simple_repeat Simple_repeat 4 54 0 2635 55 0 3 chr10 30762677 30762988 -114826300 - AluY SINE Alu -1 310 1 205 191 0 32 chr10 30764546 30764609 -114824679 + GA-rich Low_complexity Low_complexity 2 62 0 30 0 0 0 chr10 30764780 30764810 -114824478 + AT_rich Low_complexity Low_complexity 1 30 0 1707 148 0 22 chr10 30764821 30765091 -114824197 - AluJo SINE Alu -23 289 26 230 326 133 0 chr10 30766409 30766507 -114822781 + MIR SINE MIR 49 159 -103 429 196 84 9 chr10 30766531 30766638 -114822650 - MER63 DNA MER1_type -273 789 675 249 281 21 30 chr10 30767007 30767173 -114822115 - MIR SINE MIR -17 191 30 2420 83 3 3 chr10 30767931 30768243 -114821045 - AluSx SINE Alu 0 312 1 477 297 70 16 chr10 30768685 30768941 -114820347 + L3 LINE CR1 1109 1378 -199 22 70 0 0 chr10 30769458 30769501 -114819787 + AT_rich Low_complexity Low_complexity 1 43 0 2132 87 61 0 chr10 30769601 30769878 -114819410 + AluY SINE Alu 1 294 -17 23 33 0 0 chr10 30770244 30770274 -114819014 + AT_rich Low_complexity Low_complexity 1 30 0 546 235 53 21 chr10 30770309 30770496 -114818792 - L1MB8 LINE L1 0 6178 5986 512 148 30 20 chr10 30771263 30771364 -114817924 + L1MC4 LINE L1 7813 7914 -128 273 138 72 58 chr10 30771697 30771790 -114817498 + (TATAA)n Simple_repeat Simple_repeat 5 102 -42 1947 157 0 3 chr10 30771790 30772077 -114817211 - AluSx SINE Alu -26 286 1 273 138 72 58 chr10 30772077 30772121 -114817167 + (TATAA)n Simple_repeat Simple_repeat 102 144 0 346 268 138 8 chr10 30772651 30772774 -114816514 + MER20B DNA MER1_type 1 139 -644 26 0 0 0 chr10 30773144 30773170 -114816118 + AT_rich Low_complexity Low_complexity 1 26 0 1925 157 0 7 chr10 30773324 30773617 -114815671 + AluJb SINE Alu 1 291 -21 204 97 0 0 chr10 30773641 30773672 -114815616 + (GGGGA)n Simple_repeat Simple_repeat 5 35 0 213 121 0 0 chr10 30774257 30774290 -114814998 + (TG)n Simple_repeat Simple_repeat 2 34 0 25 83 0 0 chr10 30775204 30775264 -114814024 + AT_rich Low_complexity Low_complexity 1 60 0 285 75 0 0 chr10 30775368 30775408 -114813880 + (TG)n Simple_repeat Simple_repeat 2 41 0 213 266 0 47 chr10 30775434 30775498 -114813790 + L2 LINE L2 3180 3240 -73 1587 174 10 40 chr10 30776060 30776358 -114812930 - AluJo SINE Alu -23 289 1 1097 159 11 0 chr10 30776383 30776559 -114812729 - AluJb SINE Alu 0 312 135 204 262 167 0 chr10 30776681 30776765 -114812523 + L2 LINE L2 3132 3229 -43 191 61 30 0 chr10 30777105 30777138 -114812150 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 2177 98 0 7 chr10 30777140 30777425 -114811863 - AluSq SINE Alu -30 283 1 678 194 0 8 chr10 30777603 30777727 -114811561 + FLAM_C SINE Alu 1 123 -10 2241 82 0 53 chr10 30778139 30778443 -114810845 - AluSg SINE Alu -10 300 13 23 86 0 0 chr10 30778471 30778529 -114810759 + AT_rich Low_complexity Low_complexity 1 58 0 1864 164 0 22 chr10 30778581 30778893 -114810395 - AluJo SINE Alu -7 305 1 1894 150 3 20 chr10 30780260 30780566 -114808722 - AluJo SINE Alu -11 301 1 222 235 0 0 chr10 30780625 30780676 -114808612 + T-rich Low_complexity Low_complexity 1 51 0 7870 19 0 15 chr10 30780686 30781781 -114807507 - L1PA3 LINE L1 0 6155 5066 2522 87 0 0 chr10 30784838 30785147 -114804141 - AluSc SINE Alu 0 309 1 1955 129 16 19 chr10 30785939 30786248 -114803040 - AluJb SINE Alu -3 309 2 242 268 28 0 chr10 30787012 30787083 -114802205 + GA-rich Low_complexity Low_complexity 4 76 0 934 235 176 12 chr10 30787115 30787434 -114801854 + L3 LINE CR1 771 1141 -436 972 62 78 0 chr10 30787511 30787640 -114801648 + MER85 DNA T2_type 1 139 0 1655 112 42 0 chr10 30787930 30788189 -114801099 + L1MA2 LINE L1 6035 6304 0 582 181 211 0 chr10 30789264 30789397 -114799891 - L1ME2 LINE L1 0 6164 6004 304 246 94 58 chr10 30790162 30790300 -114798988 + MIR SINE MIR 44 186 -76 1523 256 93 9 chr10 30790433 30790971 -114798317 - L2 LINE L2 -434 2880 2298 1811 143 3 18 chr10 30791514 30791843 -114797445 - AluJo SINE Alu 0 325 1 1660 241 21 26 chr10 30791880 30792299 -114796989 - MER47B DNA MER2_type 0 418 2 186 71 0 0 chr10 30793583 30793611 -114795677 + (TTTTA)n Simple_repeat Simple_repeat 1 28 0 2306 108 0 3 chr10 30793787 30794094 -114795194 - AluSq SINE Alu -7 306 1 1427 151 20 0 chr10 30794301 30794546 -114794742 - L1PA15 LINE L1 -2 6163 5914 334 321 127 27 chr10 30795862 30796083 -114793205 - MIR SINE MIR 0 262 20 1740 190 3 3 chr10 30796191 30796501 -114792787 - AluJo SINE Alu -2 310 1 303 122 0 0 chr10 30797631 30797680 -114791608 + (GAA)n Simple_repeat Simple_repeat 2 50 0 674 131 0 9 chr10 30800160 30800267 -114789021 + FLAM_C SINE Alu 25 130 -13 1905 157 0 16 chr10 30800520 30800833 -114788455 - AluJo SINE Alu -4 308 1 404 317 6 19 chr10 30801324 30801485 -114787803 - L1MC5 LINE L1 -109 7852 7694 2297 82 7 0 chr10 30801519 30801801 -114787487 - AluSx SINE Alu -3 309 26 1851 165 7 0 chr10 30801974 30802265 -114787023 - AluJb SINE Alu -19 293 1 2374 76 7 10 chr10 30802693 30802997 -114786291 + AluSx SINE Alu 1 303 -9 2366 102 0 0 chr10 30802997 30803301 -114785987 + AluSc SINE Alu 1 304 -5 2369 110 0 3 chr10 30804119 30804429 -114784859 + AluSc SINE Alu 1 309 0 180 125 0 0 chr10 30805080 30805112 -114784176 + (TTTA)n Simple_repeat Simple_repeat 3 34 0 1585 156 107 0 chr10 30805114 30805377 -114783911 - AluJb SINE Alu -21 291 1 441 154 71 13 chr10 30809051 30809205 -114780083 + L1MA4A LINE L1 6055 6278 -25 2196 113 0 0 chr10 30809470 30809781 -114779507 - AluY SINE Alu 0 311 1 1741 156 0 29 chr10 30809783 30810097 -114779191 - AluJo SINE Alu -7 305 1 2099 118 0 0 chr10 30811843 30812149 -114777139 - AluSx SINE Alu -6 306 1 219 88 0 0 chr10 30812297 30812331 -114776957 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 1853 134 3 3 chr10 30812333 30812616 -114776672 - AluSx SINE Alu -29 283 1 1837 122 3 52 chr10 30813265 30813593 -114775695 - AluJo SINE Alu 0 312 1 228 280 38 61 chr10 30814685 30814817 -114774471 + MIR SINE MIR 65 193 -69 197 187 27 107 chr10 30815917 30815992 -114773296 - MIR3 SINE MIR -30 178 110 778 136 40 0 chr10 30816047 30816172 -114773116 + AluJo SINE Alu 6 135 -177 1361 213 3 20 chr10 30816181 30816477 -114772811 + AluJo SINE Alu 1 291 -21 25 108 0 0 chr10 30816477 30816579 -114772709 + AT_rich Low_complexity Low_complexity 1 102 0 1779 96 122 4 chr10 30817163 30817434 -114771854 - AluSg1 SINE Alu -6 303 1 325 216 0 14 chr10 30820322 30820396 -114768892 - Charlie5 DNA MER1_type -27 2585 2513 1628 170 42 0 chr10 30820532 30820820 -114768468 + AluJb SINE Alu 1 300 -12 2255 99 0 3 chr10 30820852 30821156 -114768132 - AluSp SINE Alu -10 303 1 657 119 0 0 chr10 30821342 30821443 -114767845 + (TC)n Simple_repeat Simple_repeat 2 102 0 324 243 0 0 chr10 30823100 30823248 -114766040 + (TG)n Simple_repeat Simple_repeat 2 149 0 1299 186 107 25 chr10 30824548 30824865 -114764423 - MER2 DNA MER2_type 0 344 2 5796 191 23 18 chr10 30824872 30825354 -114763934 - L1MC1 LINE L1 0 6333 5855 2032 94 3 20 chr10 30825354 30825674 -114763614 - AluSq SINE Alu 0 313 9 5796 191 23 18 chr10 30825674 30827022 -114762266 - L1MC1 LINE L1 -478 5855 4491 270 164 0 0 chr10 30828014 30828069 -114761219 + (CA)n Simple_repeat Simple_repeat 2 56 0 224 284 34 11 chr10 30829228 30829316 -114759972 + CT-rich Low_complexity Low_complexity 1 90 0 889 266 46 4 chr10 30829317 30829576 -114759712 - L1MC4 LINE L1 -152 7890 7621 1513 185 10 10 chr10 30831732 30832024 -114757264 - AluJo SINE Alu -20 292 1 1988 116 3 3 chr10 30832294 30832587 -114756701 - AluSq SINE Alu -20 293 1 2275 83 0 22 chr10 30832605 30832918 -114756370 - AluSx SINE Alu -1 311 6 183 362 0 0 chr10 30833799 30833846 -114755442 - MIR SINE MIR -139 69 23 23 0 0 0 chr10 30834538 30834561 -114754727 + AT_rich Low_complexity Low_complexity 1 23 0 925 183 26 65 chr10 30836484 30836529 -114752759 + MER58A DNA MER1_type 4 49 -2371 1814 143 30 7 chr10 30836529 30836830 -114752458 - AluJo SINE Alu -4 308 1 925 183 26 65 chr10 30836830 30837013 -114752275 + MER58A DNA MER1_type 49 223 -1 256 185 15 146 chr10 30838077 30838207 -114751081 - MLT1K LTR MaLR -8 580 468 676 294 37 15 chr10 30838295 30838649 -114750639 - MLT1K LTR MaLR -174 414 21 184 339 189 16 chr10 30839242 30839564 -114749724 + L3 LINE CR1 1199 1576 -1 837 149 0 22 chr10 30840121 30840255 -114749033 - FLAM_C SINE Alu 0 133 3 1818 159 0 0 chr10 30840875 30841176 -114748112 + AluJb SINE Alu 1 301 -11 310 272 33 11 chr10 30842333 30842425 -114746863 - MIR SINE MIR -150 112 19 231 330 75 9 chr10 30843856 30843962 -114745326 + MER5B DNA MER1_type 66 178 0 23 0 0 0 chr10 30844932 30844955 -114744333 + AT_rich Low_complexity Low_complexity 1 23 0 433 264 55 31 chr10 30847174 30847337 -114741951 - MER5B DNA MER1_type 0 178 12 1805 147 0 16 chr10 30848400 30848706 -114740582 + AluJo SINE Alu 12 312 0 1197 183 39 0 chr10 30849203 30849433 -114739855 - L1MA6 LINE L1 -75 6225 5987 21 36 0 0 chr10 30849501 30849529 -114739759 + AT_rich Low_complexity Low_complexity 1 28 0 387 56 0 0 chr10 30849535 30849589 -114739699 + (CA)n Simple_repeat Simple_repeat 2 55 0 193 219 16 94 chr10 30851058 30851122 -114738166 - L2 LINE L2 0 3272 3214 376 315 27 40 chr10 30851333 30851482 -114737806 - MIR SINE MIR -107 155 9 1683 143 0 14 chr10 30851769 30852048 -114737240 - AluJb SINE Alu -1 311 37 571 219 128 16 chr10 30852139 30852326 -114736962 + MIR SINE MIR 20 227 -35 2031 102 3 10 chr10 30853560 30853853 -114735435 + AluSg SINE Alu 1 291 -19 1346 188 41 11 chr10 30854031 30854302 -114734986 + AluJo SINE Alu 14 292 -20 413 255 223 48 chr10 30854954 30855330 -114733958 + L2 LINE L2 2871 3312 -1 1697 140 0 19 chr10 30855412 30855676 -114733612 + AluJb SINE Alu 21 279 -33 459 0 0 0 chr10 30856077 30856128 -114733160 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 1525 152 57 8 chr10 30856133 30856397 -114732891 - AluJo SINE Alu -35 277 1 1032 150 0 6 chr10 30858586 30858753 -114730535 - AluJb SINE Alu -3 309 144 237 200 0 0 chr10 30861599 30861644 -114727644 - L2 LINE L2 -4 3268 3224 296 309 53 0 chr10 30861741 30861835 -114727453 - L2 LINE L2 -53 3219 3121 285 98 0 0 chr10 30862057 30862098 -114727190 + (TA)n Simple_repeat Simple_repeat 2 42 0 3110 167 124 3 chr10 30862114 30862760 -114726528 + L1MB7 LINE L1 5452 6176 -8 783 212 59 6 chr10 30863011 30863181 -114726107 - AluJb SINE Alu -12 300 122 402 262 161 0 chr10 30863611 30863760 -114725528 - MIR SINE MIR -10 252 80 24 32 0 0 chr10 30863935 30863966 -114725322 + AT_rich Low_complexity Low_complexity 1 31 0 261 285 94 60 chr10 30863998 30864233 -114725055 - L1ME LINE L1 -255 5866 5624 338 201 40 7 chr10 30864410 30864559 -114724729 + (TA)n Simple_repeat Simple_repeat 1 154 0 393 291 147 26 chr10 30864562 30864943 -114724345 - L1ME LINE L1 -751 5395 4969 207 296 43 43 chr10 30865204 30865390 -114723898 - MIR SINE MIR -13 249 64 618 185 23 118 chr10 30865431 30865672 -114723616 - MLT1J LTR MaLR -206 409 110 181 180 20 40 chr10 30865751 30865801 -114723487 - MIR SINE MIR -137 71 23 1828 177 0 7 chr10 30866256 30866566 -114722722 - AluJo SINE Alu -2 310 3 2642 140 74 21 chr10 30869498 30869801 -114719487 - LOR1a LTR ERV1 -1 496 158 1713 171 24 11 chr10 30869801 30870088 -114719200 - AluJo SINE Alu -13 299 9 2642 140 74 21 chr10 30870088 30870255 -114719033 - LOR1a LTR ERV1 -339 158 1 613 309 39 0 chr10 30870392 30870599 -114718689 - MIR SINE MIR -3 259 45 1512 228 0 3 chr10 30870620 30870914 -114718374 - AluJo SINE Alu -19 293 1 25 0 0 0 chr10 30871213 30871238 -114718050 + AT_rich Low_complexity Low_complexity 1 25 0 957 172 10 44 chr10 30871404 30871608 -114717680 + AluJo SINE Alu 101 297 -15 1624 141 62 72 chr10 30871613 30871904 -114717384 + AluJo SINE Alu 1 288 -24 39 0 0 0 chr10 30871908 30871947 -114717341 + AT_rich Low_complexity Low_complexity 1 39 0 25 0 0 0 chr10 30872844 30872869 -114716419 + AT_rich Low_complexity Low_complexity 1 25 0 2071 120 14 3 chr10 30873676 30873968 -114715320 + AluSx SINE Alu 1 295 -17 2362 109 0 0 chr10 30874793 30875097 -114714191 + AluSx SINE Alu 3 306 -6 1537 228 35 83 chr10 30875806 30876260 -114713028 + L1MB7 LINE L1 5668 6096 -88 1679 181 14 0 chr10 30876260 30876553 -114712735 + AluJo SINE Alu 1 297 -15 1537 228 35 83 chr10 30876553 30876615 -114712673 + L1MB7 LINE L1 6096 6159 -25 965 175 0 0 chr10 30876864 30877018 -114712270 + AluJb SINE Alu 148 301 -11 1408 211 24 10 chr10 30877334 30877632 -114711656 + AluJo SINE Alu 1 302 -10 1848 173 7 0 chr10 30878382 30878677 -114710611 + AluJb SINE Alu 1 297 -15 1887 157 7 3 chr10 30879322 30879609 -114709679 + AluJo SINE Alu 1 288 -24 1929 150 45 25 chr10 30879684 30880043 -114709245 + MLT1B LTR MaLR 22 387 -3 194 188 29 43 chr10 30880084 30880153 -114709135 - L2 LINE L2 -213 3059 2992 675 299 44 6 chr10 30882825 30883146 -114706142 - LTR16B LTR ERVL -1 463 131 1995 147 0 13 chr10 30883173 30883479 -114705809 - MER1B DNA MER1_type 0 339 38 736 270 57 5 chr10 30884238 30884449 -114704839 + MIR SINE MIR 31 252 -10 1645 186 40 15 chr10 30884494 30884822 -114704466 - MER58B DNA MER1_type 0 341 6 1335 167 22 13 chr10 30885176 30885404 -114703884 + MSTA LTR MaLR 1 230 -198 1254 204 26 0 chr10 30885420 30885650 -114703638 + MSTA LTR MaLR 191 426 0 411 250 26 0 chr10 30885711 30885827 -114703461 - MIR SINE MIR -62 200 82 3536 55 23 5 chr10 30885849 30886285 -114703003 + MLT2A1 LTR ERVL 1 444 0 2310 98 101 24 chr10 30886285 30886663 -114702625 + MER61C LTR ERV1 28 434 0 4683 158 11 66 chr10 30887228 30888184 -114701104 + MER4D LTR ERV1 1 903 0 636 83 31 10 chr10 30888860 30888956 -114700332 + MER4A LTR ERV1 1 98 -566 1839 146 6 19 chr10 30888956 30889306 -114699982 + MER4A LTR ERV1 261 664 0 274 290 0 0 chr10 30889322 30889391 -114699897 + (TA)n Simple_repeat Simple_repeat 1 69 0 2599 138 62 15 chr10 30889767 30890238 -114699050 + L1MB3 LINE L1 5684 6176 -7 234 0 0 0 chr10 30890389 30890415 -114698873 + (TA)n Simple_repeat Simple_repeat 2 27 0 1406 239 7 47 chr10 30890417 30890823 -114698465 - MLT2C1 LTR ERVL -7 390 1 225 0 0 0 chr10 30890826 30890851 -114698437 + (TA)n Simple_repeat Simple_repeat 2 26 0 339 96 0 0 chr10 30890866 30890918 -114698370 + (TG)n Simple_repeat Simple_repeat 1 52 0 591 184 208 0 chr10 30891144 30891269 -114698019 - FRAM SINE Alu -20 156 6 2008 165 72 78 chr10 30891322 30891861 -114697427 + LTR10A LTR ERV1 13 548 -61 973 201 73 29 chr10 30891870 30892143 -114697145 + LTR10A-int LTR ERV1 1 285 -6364 252 272 65 22 chr10 30892405 30892497 -114696791 + LTR10A-int LTR ERV1 975 1070 -5579 5760 85 9 47 chr10 30892505 30893653 -114695635 + HERV17 LTR ERV1 704 1719 -5177 388 202 167 0 chr10 30893656 30893740 -114695548 - LTR8 LTR ERV1 -438 253 156 1649 95 42 4 chr10 30893740 30894003 -114695285 + Harlequin LTR ERV1 1807 2079 -4817 647 149 28 0 chr10 30894003 30894110 -114695178 + MSTD LTR MaLR 287 396 0 1394 262 128 31 chr10 30894122 30894722 -114694566 - MER21B LTR ERV1 -144 787 38 611 151 0 28 chr10 30894735 30894841 -114694447 - FRAM SINE Alu -10 166 64 6963 131 22 18 chr10 30894939 30897124 -114692164 + L1MA3 LINE L1 4113 6305 0 246 327 40 25 chr10 30897197 30897399 -114691889 + HAL1 LINE L1 1513 1717 -790 28 0 0 0 chr10 30897580 30897608 -114691680 + AT_rich Low_complexity Low_complexity 1 28 0 1412 222 29 0 chr10 30897842 30898121 -114691167 + AluJo SINE Alu 1 287 -25 226 264 236 24 chr10 30898187 30898741 -114690547 + L1M4 LINE L1 2220 2891 -3255 1407 196 14 39 chr10 30899186 30899472 -114689816 + AluJo SINE Alu 1 279 -33 927 172 0 9 chr10 30899472 30899703 -114689585 + GA-rich Low_complexity Low_complexity 1 228 0 1083 91 11 11 chr10 30899795 30899971 -114689317 + (GAAA)n Simple_repeat Simple_repeat 1 176 0 192 259 0 0 chr10 30900048 30900102 -114689186 + GA-rich Low_complexity Low_complexity 4 57 0 880 132 0 13 chr10 30900122 30900281 -114689007 + (GGAA)n Simple_repeat Simple_repeat 4 160 0 2401 53 11 0 chr10 30900591 30900876 -114688412 - AluY SINE Alu -23 288 1 1905 176 76 83 chr10 30901960 30902476 -114686812 + MLT2B3 LTR ERVL 35 546 -8 414 130 13 52 chr10 30902702 30902779 -114686509 - FLAM SINE Alu -12 131 58 3426 197 24 83 chr10 30902982 30904012 -114685276 - LTR5 LTR ERVK 0 969 1 238 294 73 9 chr10 30904401 30904412 -114684876 - MIR SINE MIR -95 167 158 1859 167 52 0 chr10 30904412 30904741 -114684547 - MER7A DNA MER2_type -1 345 2 238 294 73 9 chr10 30904741 30904838 -114684450 - MIR SINE MIR -104 158 52 553 250 42 24 chr10 30905320 30905488 -114683800 - MER5B DNA MER1_type -4 174 4 807 209 11 11 chr10 30905500 30905677 -114683611 - MER5B DNA MER1_type -1 177 1 1935 263 39 26 chr10 30906025 30906610 -114682678 + MLT1E LTR MaLR 1 593 0 201 405 8 16 chr10 30906635 30906761 -114682527 - MIR SINE MIR -64 144 20 242 0 0 0 chr10 30906928 30906955 -114682333 - L1P LINE L1 -2054 4092 4066 * 4628 10 0 0 chr10 30906954 30907466 -114681822 + L1HS LINE L1 5644 6155 0 252 0 0 0 chr10 30907471 30907499 -114681789 + (A)n Simple_repeat Simple_repeat 1 28 0 190 283 38 0 chr10 30908081 30908134 -114681154 - MIR SINE MIR -78 130 76 304 266 28 0 chr10 30909875 30909984 -114679304 - L1M2 LINE L1 -443 5857 5746 * 461 237 9 9 chr10 30909982 30910096 -114679192 - L1MA5 LINE L1 -441 5859 5746 431 246 8 23 chr10 30910094 30910224 -114679064 - L1MA6 LINE L1 -441 5859 5732 * 434 286 68 13 chr10 30910391 30910625 -114678663 + L1MEd LINE L1 811 1057 -5062 21 57 0 0 chr10 30910878 30910913 -114678375 + AT_rich Low_complexity Low_complexity 1 35 0 2283 108 16 0 chr10 30910914 30911219 -114678069 - AluSx SINE Alu -2 310 1 1063 172 0 0 chr10 30911270 30911433 -114677855 + AluJb SINE Alu 1 163 -149 478 200 0 0 chr10 30911435 30911520 -114677768 - FLAM_A SINE Alu -35 107 23 1921 223 21 13 chr10 30911527 30911997 -114677291 + L1MB4 LINE L1 4246 4719 -1427 1859 184 24 3 chr10 30911997 30912371 -114676917 + L1MB4 LINE L1 5797 6178 -2 1967 151 0 20 chr10 30912830 30913135 -114676153 + AluSx SINE Alu 1 299 -13 2182 217 93 74 chr10 30913136 30913669 -114675619 + L1MC4 LINE L1 7104 7662 -380 2208 97 0 72 chr10 30913669 30913989 -114675299 + AluSx SINE Alu 1 297 -15 2182 217 93 74 chr10 30913989 30914360 -114674928 + L1MC4 LINE L1 7662 8025 -17 24 32 0 0 chr10 30914468 30914499 -114674789 + AT_rich Low_complexity Low_complexity 1 31 0 385 271 28 9 chr10 30914902 30915009 -114674279 + L2 LINE L2 3197 3305 -8 207 300 0 0 chr10 30915985 30916045 -114673243 - L2 LINE L2 -559 2755 2696 261 98 0 0 chr10 30916872 30916913 -114672375 + (TAA)n Simple_repeat Simple_repeat 1 41 0 1499 154 96 32 chr10 30917265 30917545 -114671743 - AluJo SINE Alu -12 300 3 259 326 121 0 chr10 30917884 30918016 -114671272 - MIR3 SINE MIR -27 181 34 740 197 0 0 chr10 30918557 30918694 -114670594 + AluJo SINE Alu 1 137 -175 1518 185 27 20 chr10 30918694 30918986 -114670302 + AluJb SINE Alu 1 294 -18 275 230 68 0 chr10 30919130 30919204 -114670084 + MER116 DNA Mariner 1 79 -1 416 35 0 17 chr10 30919593 30919651 -114669637 - L1PA7 LINE L1 -3 6151 6095 2505 71 3 0 chr10 30919755 30920064 -114669224 + AluSx SINE Alu 1 310 -2 257 154 0 0 chr10 30921848 30921887 -114667401 + L2 LINE L2 3214 3252 -20 1988 142 3 16 chr10 30921976 30922279 -114667009 + AluSx SINE Alu 1 299 -13 467 258 38 15 chr10 30922310 30922442 -114666846 + L2 LINE L2 2956 3090 -223 2638 127 52 40 chr10 30922447 30922982 -114666306 + MER57B-int LTR ERV1 1018 3648 -4168 1659 136 11 0 chr10 30922967 30923246 -114666042 - MER41-int LTR ERV1 -3342 4195 3914 * 1661 130 0 8 chr10 30923244 30923506 -114665782 - MER41-int LTR ERV1 -2435 2580 2321 753 54 0 0 chr10 30923506 30923599 -114665689 - AluYa5/8 SINE Alu -16 294 202 1697 89 4 4 chr10 30923599 30923847 -114665441 - MER41-int LTR ERV1 -2868 3078 2831 568 92 51 31 chr10 30923831 30923929 -114665359 + MER57B-int LTR ERV1 4905 5004 -2533 * 12096 117 54 9 chr10 30923928 30924792 -114664496 + MER57B-int LTR ERV1 5249 6073 -1464 2322 105 3 0 chr10 30924792 30925097 -114664191 - AluSp SINE Alu -7 306 1 12096 117 54 9 chr10 30925097 30926052 -114663236 + MER57B-int LTR ERV1 6073 7150 -387 673 141 23 31 chr10 30926052 30926180 -114663108 + LTR54B LTR ERV1 5 131 -367 1643 78 122 0 chr10 30926181 30926411 -114662877 + MER57B-int LTR ERV1 7280 7537 0 2849 128 7 2 chr10 30926411 30926840 -114662448 + MER57B LTR ERV1 1 431 -3 1580 153 4 8 chr10 30926842 30927091 -114662197 + AluJo SINE Alu 50 297 -15 24 0 0 0 chr10 30927091 30927115 -114662173 + AT_rich Low_complexity Low_complexity 1 24 0 5548 202 20 21 chr10 30927164 30928229 -114661059 - L1MC1 LINE L1 -2 6331 5267 1720 186 3 3 chr10 30928229 30928520 -114660768 - AluJb SINE Alu -20 292 2 5548 202 20 21 chr10 30928520 30929720 -114659568 - L1MC1 LINE L1 -1066 5267 4071 429 200 22 0 chr10 30929718 30929808 -114659480 - L1M4 LINE L1 -1762 4384 4293 * 1889 182 3 6 chr10 30929841 30930154 -114659134 - AluJb SINE Alu 0 312 1 1500 297 84 45 chr10 30930881 30931548 -114657740 + HERV16 LTR ERVL 1585 2277 -2719 1054 144 0 0 chr10 30931616 30931776 -114657512 + FRAM SINE Alu 5 164 -2 2264 87 0 3 chr10 30931785 30932073 -114657215 + AluY SINE Alu 18 304 -7 198 281 0 16 chr10 30932243 30932307 -114656981 - L2 LINE L2 -4 3268 3206 916 179 0 31 chr10 30932665 30932827 -114656461 - FRAM SINE Alu -19 157 1 422 228 19 95 chr10 30933845 30933952 -114655336 + MIR SINE MIR 90 183 -79 1640 182 7 13 chr10 30933952 30934254 -114655034 + AluJo SINE Alu 1 300 -12 422 228 19 95 chr10 30934254 30934304 -114654984 + MIR SINE MIR 183 235 -27 7214 188 151 19 chr10 30934852 30936403 -114652885 - MER52A LTR ERV1 0 1755 1 1833 160 0 3 chr10 30936752 30937064 -114652224 + AluJb SINE Alu 1 311 0 744 187 27 13 chr10 30937681 30937831 -114651457 + FRAM SINE Alu 4 155 -21 1189 193 166 14 chr10 30937831 30938193 -114651095 - L1MC4 LINE L1 -738 7304 6888 349 232 128 16 chr10 30938557 30938682 -114650606 - L2 LINE L2 -4 3309 3171 2713 140 20 27 chr10 30939180 30939425 -114649863 + L1PB4 LINE L1 5708 5950 -206 1854 158 32 0 chr10 30939425 30939704 -114649584 + AluJb SINE Alu 3 290 -22 2713 140 20 27 chr10 30939704 30939907 -114649381 + L1PB4 LINE L1 5950 6153 -3 24 0 0 0 chr10 30940297 30940321 -114648967 + AT_rich Low_complexity Low_complexity 1 24 0 186 71 0 0 chr10 30940372 30940400 -114648888 + (TTTA)n Simple_repeat Simple_repeat 4 31 0 258 263 25 0 chr10 30940999 30941079 -114648209 - MIR3 SINE MIR -33 175 94 548 233 47 31 chr10 30941506 30941635 -114647653 - MER20 DNA MER1_type -36 183 53 333 47 0 0 chr10 30941691 30941734 -114647554 + (CA)n Simple_repeat Simple_repeat 2 44 0 2103 111 0 80 chr10 30941734 30941922 -114647366 - AluSx SINE Alu -13 299 146 2333 97 0 3 chr10 30941922 30942222 -114647066 - AluSx SINE Alu -13 299 1 2103 111 0 80 chr10 30942222 30942358 -114646930 - AluSx SINE Alu -166 146 1 292 342 44 13 chr10 30942372 30942530 -114646758 - MIR SINE MIR -71 191 29 217 352 9 29 chr10 30942647 30942752 -114646536 + L3b LINE CR1 1479 1581 -2 2226 114 3 0 chr10 30943521 30943818 -114645470 + AluSx SINE Alu 1 298 -14 1921 145 0 40 chr10 30944739 30945063 -114644225 - AluJb SINE Alu -1 311 1 863 141 0 0 chr10 30945065 30945193 -114644095 - AluJo/FLAM SINE Alu -179 133 6 29 84 0 0 chr10 30945390 30945461 -114643827 + AT_rich Low_complexity Low_complexity 1 71 0 201 279 31 112 chr10 30945549 30945623 -114643665 - MIR3 SINE MIR -55 153 97 2790 119 47 9 chr10 30945623 30946053 -114643235 + MER83 LTR ERV1 3 448 0 201 279 31 112 chr10 30946053 30946139 -114643149 - MIR3 SINE MIR -111 97 6 1684 283 85 16 chr10 30946478 30946711 -114642577 + L2 LINE L2 1892 2107 -1207 1199 179 92 118 chr10 30946711 30947107 -114642181 + MER4C LTR ERV1 2 386 -79 351 0 0 0 chr10 30947107 30947146 -114642142 + (TG)n Simple_repeat Simple_repeat 2 40 0 1199 179 92 118 chr10 30947146 30947225 -114642063 + MER4C LTR ERV1 386 465 0 1684 283 85 16 chr10 30947225 30947828 -114641460 + L2 LINE L2 2107 2786 -528 532 258 14 83 chr10 30948205 30948422 -114640866 + L2 LINE L2 3112 3313 0 1452 249 75 22 chr10 30948627 30949081 -114640207 + MLT1F LTR MaLR 60 537 -5 270 260 60 30 chr10 30949109 30949209 -114640079 - MIR SINE MIR -108 154 52 192 97 0 0 chr10 30950463 30950494 -114638794 + (GA)n Simple_repeat Simple_repeat 2 32 0 187 360 8 32 chr10 30951594 30951719 -114637569 - MIR3 SINE MIR -21 187 66 272 359 0 0 chr10 30952312 30952418 -114636870 + L2 LINE L2 2266 2371 -943 191 261 0 0 chr10 30952449 30952495 -114636793 + L2 LINE L2 3221 3266 -6 2781 121 91 0 chr10 30952610 30953063 -114636225 + L1PB3 LINE L1 5660 6153 -1 2120 132 0 3 chr10 30953205 30953516 -114635772 - AluSx SINE Alu -2 310 1 1892 157 0 22 chr10 30953516 30953828 -114635460 - AluJb SINE Alu -6 306 1 318 218 129 10 chr10 30953903 30954004 -114635284 - MIR SINE MIR -56 206 94 944 101 0 0 chr10 30954195 30954314 -114634974 + FLAM_C SINE Alu 1 119 -24 465 103 28 28 chr10 30954314 30954421 -114634867 + (TA)n Simple_repeat Simple_repeat 2 108 0 24 53 0 0 chr10 30954439 30954477 -114634811 + AT_rich Low_complexity Low_complexity 1 38 0 304 236 297 0 chr10 30954627 30954775 -114634513 - MIR SINE MIR -54 208 17 1224 205 95 3 chr10 30955052 30955307 -114633981 + AluJo SINE Alu 1 286 -26 360 0 0 0 chr10 30955307 30955347 -114633941 + (CA)n Simple_repeat Simple_repeat 1 40 0 1224 205 95 3 chr10 30955347 30955374 -114633914 + AluJo SINE Alu 286 309 -3 225 0 0 0 chr10 30956115 30956140 -114633148 + (TA)n Simple_repeat Simple_repeat 1 25 0 2118 130 7 0 chr10 30956491 30956784 -114632504 + AluSx SINE Alu 1 295 -17 21 36 0 0 chr10 30956858 30956886 -114632402 + AT_rich Low_complexity Low_complexity 1 28 0 289 186 18 26 chr10 30956971 30957084 -114632204 + (TA)n Simple_repeat Simple_repeat 1 112 0 1814 161 3 0 chr10 30957084 30957370 -114631918 - AluJo SINE Alu -25 287 1 1700 208 25 11 chr10 30957413 30957778 -114631510 + MLT1A2 LTR MaLR 1 370 -4 2699 23 7 3 chr10 30957917 30958225 -114631063 - AluY SINE Alu -2 309 1 202 326 11 22 chr10 30958392 30958481 -114630807 + L2 LINE L2 3185 3272 0 340 323 46 32 chr10 30958501 30958679 -114630609 + MIR SINE MIR 5 184 -77 183 328 123 0 chr10 30960734 30960856 -114628432 - MIR SINE MIR -57 205 69 557 254 40 23 chr10 30961057 30961230 -114628058 - MIR SINE MIR -1 261 86 2298 107 0 7 chr10 30961774 30962084 -114627204 + AluSx SINE Alu 5 312 0 854 231 0 27 chr10 30962870 30963056 -114626232 + MER41D LTR ERV1 1 181 -376 6953 123 128 108 chr10 30963056 30964709 -114624579 - pTR5 LTR ERV1 -7 2431 745 1718 192 51 16 chr10 30964709 30965079 -114624209 + MER41D LTR ERV1 166 548 -9 1176 165 55 42 chr10 30965090 30965182 -114624106 - Tigger3(Golem) DNA MER2_type -2 3027 2938 2410 60 0 0 chr10 30965182 30965500 -114623788 + AluY SINE Alu 1 318 0 1176 165 55 42 chr10 30965500 30965642 -114623646 - Tigger3(Golem) DNA MER2_type -91 2938 2789 4256 53 23 5 chr10 30965653 30966256 -114623032 + Harlequin LTR ERV1 1961 2574 -4322 * 24575 110 11 16 chr10 30966255 30969816 -114619472 + Harlequin LTR ERV1 3352 6896 0 3940 42 38 0 chr10 30969816 30970288 -114619000 + LTR2B LTR ERV1 1 490 0 478 95 0 0 chr10 30970288 30970362 -114618926 + AluSc SINE Alu 236 309 0 672 219 44 15 chr10 30970362 30970499 -114618789 - Tigger3(Golem) DNA MER2_type -2888 141 1 1425 182 0 55 chr10 30970777 30970922 -114618366 + AluJo SINE Alu 1 122 -190 2115 115 21 0 chr10 30970922 30971209 -114618079 + AluSx SINE Alu 1 293 -19 1425 182 0 55 chr10 30971209 30971370 -114617918 + AluJo SINE Alu 122 290 -22 5043 154 26 20 chr10 30972105 30973019 -114616269 - MER49 LTR ERV1 -1 922 3 281 169 17 0 chr10 30973042 30973101 -114616187 + CT-rich Low_complexity Low_complexity 1 60 0 2029 137 7 3 chr10 30973101 30973400 -114615888 - AluSx SINE Alu -4 308 9 646 238 48 12 chr10 30973497 30973665 -114615623 - MER5A DNA MER1_type 0 189 16 823 259 50 27 chr10 30973670 30973967 -114615321 + LTR16A LTR ERVL 119 422 -28 3710 151 3 9 chr10 30974400 30974593 -114614695 - LTR39 LTR ERV1 0 783 591 1954 137 35 0 chr10 30974593 30974877 -114614411 + AluSx SINE Alu 2 295 -17 3710 151 3 9 chr10 30974877 30975265 -114614023 - LTR39 LTR ERV1 -192 591 205 926 70 160 26 chr10 30975266 30975422 -114613866 + L1PA8 LINE L1 5995 6171 -1 * 1803 229 47 16 chr10 30975421 30975930 -114613358 + L1ME3A LINE L1 5634 6162 -8 1569 193 58 20 chr10 30976154 30976502 -114612786 - MLT1A1 LTR MaLR -2 363 3 219 36 0 0 chr10 30976738 30976766 -114612522 + (CAGAGA)n Simple_repeat Simple_repeat 3 30 0 508 255 43 43 chr10 30977212 30977396 -114611892 + MIR3 SINE MIR 4 187 -21 1469 98 229 0 chr10 30977550 30977795 -114611493 + AluSx SINE Alu 1 301 -1 1162 206 31 103 chr10 30977862 30978091 -114611197 - MLT1B LTR MaLR -3 387 200 333 0 0 0 chr10 30978091 30978128 -114611160 + (TG)n Simple_repeat Simple_repeat 2 38 0 1162 206 31 103 chr10 30978128 30978315 -114610973 - MLT1B LTR MaLR -190 200 1 1931 150 0 34 chr10 30978867 30979187 -114610101 + AluJb SINE Alu 1 309 -3 2641 241 88 20 chr10 30979596 30979915 -114609373 - L1ME3A LINE L1 -6 6164 5868 1400 135 8 45 chr10 30979915 30980159 -114609129 + MER46A DNA MER2_type 2 236 0 2641 241 88 20 chr10 30980159 30980653 -114608635 - L1ME3A LINE L1 -302 5868 5295 3267 87 93 10 chr10 30980698 30981190 -114608098 - L1PA11 LINE L1 0 6174 5642 853 150 7 21 chr10 30981216 30981356 -114607932 + AluJo SINE Alu 1 138 -174 1733 113 0 0 chr10 30981376 30981597 -114607691 - AluSg/x SINE Alu -20 292 72 308 215 0 25 chr10 30982163 30982242 -114607046 + L2 LINE L2 3163 3239 -74 300 227 31 10 chr10 30982976 30983073 -114606215 + (TA)n Simple_repeat Simple_repeat 2 100 0 261 0 0 0 chr10 30983075 30983104 -114606184 + (TG)n Simple_repeat Simple_repeat 2 30 0 2028 140 0 25 chr10 30983191 30983506 -114605782 - AluSx SINE Alu -3 309 3 207 0 0 0 chr10 30985423 30985446 -114603842 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 222 37 0 0 chr10 30987009 30987036 -114602252 + (CA)n Simple_repeat Simple_repeat 2 28 0 3652 155 38 41 chr10 30987732 30988461 -114600827 - LTR8A LTR ERV1 0 727 1 2040 173 12 46 chr10 30988811 30989221 -114600067 - MSTD LTR MaLR 0 396 1 413 296 64 54 chr10 30989573 30989776 -114599512 + MIR SINE MIR 34 238 -24 213 174 43 0 chr10 30990097 30990143 -114599145 + (TTAG)n Simple_repeat Simple_repeat 2 49 0 416 203 83 124 chr10 30990997 30991238 -114598050 - L2 LINE L2 -1 3312 3082 23 0 0 0 chr10 30991705 30991728 -114597560 + AT_rich Low_complexity Low_complexity 1 23 0 815 157 0 8 chr10 30991728 30991862 -114597426 - FLAM_C SINE Alu 0 133 1 21 0 0 0 chr10 30992369 30992390 -114596898 + AT_rich Low_complexity Low_complexity 1 21 0 1175 149 0 0 chr10 30992488 30992656 -114596632 - AluSx SINE Alu -11 299 132 13445 54 6 0 chr10 30992656 30995087 -114594201 - L1PA6 LINE L1 -2 6152 3718 5388 157 37 30 chr10 30995088 30996061 -114593227 - L1P LINE L1 -5153 993 14 753 167 71 0 chr10 30996061 30996187 -114593101 - AluSx SINE Alu -177 136 2 365 162 0 14 chr10 30996196 30996270 -114593018 + (TG)n Simple_repeat Simple_repeat 2 74 0 306 179 0 0 chr10 30996270 30996326 -114592962 + L1MC4 LINE L1 6648 6703 -1339 422 91 13 0 chr10 30996462 30996539 -114592749 + (TCTA)n Simple_repeat Simple_repeat 4 81 0 334 347 59 6 chr10 30996636 30996806 -114592482 - MIR3 SINE MIR -5 203 25 2060 145 0 16 chr10 30997149 30997466 -114591822 + AluJb SINE Alu 1 312 0 186 319 83 0 chr10 30998954 30999026 -114590262 - L2 LINE L2 -44 3228 3151 763 132 0 0 chr10 30999161 30999275 -114590013 - L1MB3 LINE L1 -242 5941 5828 1262 202 19 0 chr10 30999292 30999549 -114589739 + L1MD3 LINE L1 7577 7838 -157 313 304 97 23 chr10 31000232 31000467 -114588821 - MIR SINE MIR -10 252 2 375 23 0 0 chr10 31001007 31001051 -114588237 + (CA)n Simple_repeat Simple_repeat 1 44 0 2123 134 3 0 chr10 31001784 31002083 -114587205 - AluSx SINE Alu -12 300 1 675 174 0 33 chr10 31002100 31002221 -114587067 - FLAM_C SINE Alu -17 126 10 183 372 16 33 chr10 31002359 31002480 -114586808 + MIR SINE MIR 26 144 -118 375 262 85 6 chr10 31004639 31004803 -114584485 + MIR SINE MIR 86 262 0 1645 132 12 103 chr10 31005550 31005869 -114583419 - AluJb SINE Alu -22 290 1 206 216 273 0 chr10 31006110 31006198 -114583090 - MIR SINE MIR 0 262 151 376 291 29 34 chr10 31006598 31006660 -114582628 + MER5B DNA MER1_type 1 62 -116 1696 164 51 7 chr10 31006660 31006953 -114582335 + AluJo SINE Alu 1 306 -6 376 291 29 34 chr10 31006953 31007065 -114582223 + MER5B DNA MER1_type 62 174 -4 401 222 8 34 chr10 31007538 31007655 -114581633 - MER5B DNA MER1_type -61 117 4 574 202 0 20 chr10 31007806 31008005 -114581283 + CT-rich Low_complexity Low_complexity 1 194 0 1378 176 42 93 chr10 31008061 31008217 -114581071 - MER96B DNA MER1_type? -5 412 250 1958 142 3 56 chr10 31008217 31008540 -114580748 + AluSq SINE Alu 1 306 -7 1378 176 42 93 chr10 31008540 31008791 -114580497 - MER96B DNA MER1_type? -167 250 26 1933 142 0 0 chr10 31009770 31010045 -114579243 + AluJo SINE Alu 1 275 -37 902 210 125 67 chr10 31010066 31010457 -114578831 + LTR37B LTR ERV1 51 464 -4 1563 145 105 14 chr10 31010630 31010906 -114578382 - AluJo SINE Alu -11 301 1 543 251 41 12 chr10 31011153 31011324 -114577964 - MER5B DNA MER1_type 0 178 3 23 0 0 0 chr10 31011684 31011707 -114577581 + AT_rich Low_complexity Low_complexity 1 23 0 231 173 0 0 chr10 31011808 31011860 -114577428 + C-rich Low_complexity Low_complexity 1 52 0 956 174 0 18 chr10 31012761 31012928 -114576360 - FRAM SINE Alu -15 161 1 362 333 104 9 chr10 31012930 31013161 -114576127 - MIR SINE MIR -2 260 8 385 293 79 45 chr10 31013504 31013705 -114575583 + L1ME4a LINE L1 5736 5950 -171 1771 174 3 19 chr10 31013705 31014021 -114575267 + AluJo SINE Alu 1 311 -1 385 293 79 45 chr10 31014021 31014085 -114575203 + L1ME4a LINE L1 5950 6010 -111 1945 138 17 3 chr10 31014859 31015149 -114574139 - AluJo SINE Alu -15 297 4 2088 103 3 23 chr10 31015160 31015495 -114573793 - AluSx SINE Alu 0 312 1 204 346 68 0 chr10 31015858 31015991 -114573297 + MIR SINE MIR 65 206 -56 1566 138 57 8 chr10 31016100 31016347 -114572941 - AluJo SINE Alu -23 289 31 285 269 67 42 chr10 31016351 31016470 -114572818 - L2 LINE L2 -11 3302 3181 1594 91 59 18 chr10 31018224 31018445 -114570843 + MER30 DNA MER1_type 1 230 0 799 185 0 0 chr10 31018585 31018704 -114570584 - FLAM_C SINE Alu -23 120 2 1886 108 73 0 chr10 31018766 31019025 -114570263 - AluSx SINE Alu -32 280 3 1881 160 3 0 chr10 31020927 31021220 -114568068 + AluJo SINE Alu 1 294 -18 2244 128 0 0 chr10 31021364 31021676 -114567612 - AluSx SINE Alu 0 312 1 1762 158 17 20 chr10 31021744 31022041 -114567247 - AluJb SINE Alu -16 296 1 258 216 0 0 chr10 31022108 31022159 -114567129 - MER117 DNA MER1_type -78 119 69 590 285 144 30 chr10 31022207 31022611 -114566677 - LTR16A LTR ERVL 0 450 1 230 0 0 32 chr10 31022677 31022708 -114566580 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 989 299 29 8 chr10 31022738 31023113 -114566175 + L1ME4a LINE L1 5495 5877 -244 273 170 0 0 chr10 31023158 31023205 -114566083 - MER3 DNA MER1_type -9 200 154 2384 176 54 45 chr10 31023211 31023569 -114565719 + L1MA9 LINE L1 5752 6105 -207 1891 149 4 0 chr10 31023569 31023844 -114565444 + AluSx SINE Alu 1 276 -36 2384 176 54 45 chr10 31023844 31023892 -114565396 + L1MA9 LINE L1 6105 6151 -161 321 26 0 0 chr10 31023892 31023930 -114565358 + (CA)n Simple_repeat Simple_repeat 1 38 0 2384 176 54 45 chr10 31023930 31024078 -114565210 + L1MA9 LINE L1 6151 6312 0 700 211 0 78 chr10 31024091 31024143 -114565145 - MER3 DNA MER1_type 4 166 112 2865 10 0 0 chr10 31024143 31024454 -114564834 - AluYa5 SINE Alu 0 311 1 700 211 0 78 chr10 31024454 31024581 -114564707 - MER3 DNA MER1_type -50 112 1 209 276 48 9 chr10 31025160 31025265 -114564023 - MIR SINE MIR -14 248 140 26 50 0 0 chr10 31025393 31025433 -114563855 + AT_rich Low_complexity Low_complexity 1 40 0 251 209 30 15 chr10 31026490 31026557 -114562731 + (TATG)n Simple_repeat Simple_repeat 3 70 0 974 111 0 22 chr10 31026662 31026797 -114562491 + FLAM_C SINE Alu 1 132 -1 2072 294 110 24 chr10 31027227 31027914 -114561374 + L1MEc LINE L1 49 676 -5720 4185 130 7 0 chr10 31027914 31028512 -114560776 + LTR43 LTR ERV1 1 602 0 2072 294 110 24 chr10 31028512 31029224 -114560064 + L1MEc LINE L1 676 1568 -4828 1786 146 24 28 chr10 31029232 31029337 -114559951 + AluJb SINE Alu 1 105 -207 2587 122 5 19 chr10 31029337 31029706 -114559582 - THE1B LTR MaLR 0 364 1 1786 146 24 28 chr10 31029706 31029887 -114559401 + AluJb SINE Alu 105 286 -26 2202 215 44 47 chr10 31029902 31030601 -114558687 + L1MEc LINE L1 1577 2273 -4123 907 207 23 0 chr10 31030634 31030808 -114558480 + MER58A DNA MER1_type 43 220 -4 1820 258 60 26 chr10 31030809 31031406 -114557882 + L1MEc LINE L1 2225 2847 -3368 3923 121 4 9 chr10 31031406 31031936 -114557352 + MER1A DNA MER1_type 1 527 0 1820 258 60 26 chr10 31031936 31031992 -114557296 + L1MEc LINE L1 2847 2900 -3315 1592 257 20 20 chr10 31031993 31032157 -114557131 - HAL1 LINE L1 -674 1833 1670 1007 332 45 22 chr10 31032157 31032666 -114556622 + LTR33 LTR ERVL 1 521 0 1592 257 20 20 chr10 31032666 31032957 -114556331 - HAL1 LINE L1 -836 1671 1378 543 195 0 0 chr10 31032966 31033053 -114556235 - Tigger7 DNA MER2_type -11 2480 2394 1464 230 0 4 chr10 31033059 31033320 -114555968 - Tigger7 DNA MER2_type -2227 260 1 2667 261 95 51 chr10 31033338 31034356 -114554932 - HAL1 LINE L1 -1165 1342 370 189 0 0 0 chr10 31034356 31034377 -114554911 + (TTG)n Simple_repeat Simple_repeat 1 21 0 2667 261 95 51 chr10 31034377 31034597 -114554691 - HAL1 LINE L1 -2137 370 44 2203 230 68 30 chr10 31034597 31035197 -114554091 - MLT1E2 LTR MaLR -1 625 3 2667 261 95 51 chr10 31035197 31035241 -114554047 - HAL1 LINE L1 -2463 44 3 534 325 45 29 chr10 31035273 31035581 -114553707 + L3 LINE CR1 1136 1448 -129 1508 180 71 19 chr10 31035664 31035986 -114553302 + MER44D DNA MER2_type 1 609 0 644 198 33 0 chr10 31036087 31036208 -114553080 - L2 LINE L2 -1 3312 3188 201 376 58 31 chr10 31036495 31036721 -114552567 + L2 LINE L2 2822 3053 -219 2314 113 0 3 chr10 31036721 31037032 -114552256 - AluSx SINE Alu -2 310 1 1387 153 57 66 chr10 31037299 31037646 -114551642 + AluJo SINE Alu 13 356 0 2849 138 5 25 chr10 31039239 31039680 -114549608 + Tigger2a DNA MER2_type 3 434 0 2124 132 0 0 chr10 31039861 31040164 -114549124 - AluSg SINE Alu -7 303 1 855 237 47 0 chr10 31040750 31040940 -114548348 + MER58A DNA MER1_type 23 221 -3 1914 166 0 6 chr10 31041004 31041317 -114547971 + AluJo SINE Alu 1 311 -1 1145 243 122 8 chr10 31041908 31042377 -114546911 - Charlie7 DNA MER1_type -5 2607 2086 729 269 228 8 chr10 31042377 31042771 -114546517 - L1MC/D LINE L1 -1990 5818 5338 7436 214 94 57 chr10 31042890 31045625 -114543663 + L1MC3 LINE L1 4283 7240 -545 408 229 36 0 chr10 31045625 31045708 -114543580 + MLT1F1 LTR MaLR 45 130 -437 7436 214 94 57 chr10 31045708 31046257 -114543031 + L1MC3 LINE L1 7240 7767 -18 784 246 87 4 chr10 31046258 31046510 -114542778 - Charlie7 DNA MER1_type -898 1714 1442 1068 190 41 37 chr10 31046876 31047145 -114542143 - L1MB5 LINE L1 -1 6173 5904 507 263 62 39 chr10 31047151 31047330 -114541958 + MER5A DNA MER1_type 1 183 -6 1186 203 60 56 chr10 31048533 31048799 -114540489 + AluJo SINE Alu 1 267 -45 21 36 0 0 chr10 31048820 31048848 -114540440 + AT_rich Low_complexity Low_complexity 1 28 0 233 259 17 0 chr10 31049010 31049068 -114540220 + MIR SINE MIR 203 261 -1 225 180 0 0 chr10 31049743 31049793 -114539495 + (TG)n Simple_repeat Simple_repeat 1 50 0 201 224 20 41 chr10 31050583 31050632 -114538656 - MIR3 SINE MIR -51 157 110 2508 149 45 12 chr10 31051005 31051231 -114538057 - Tigger2 DNA MER2_type 0 2718 2501 1942 156 13 3 chr10 31051231 31051538 -114537750 + AluJb SINE Alu 1 310 -2 2508 149 45 12 chr10 31051538 31051734 -114537554 - Tigger2 DNA MER2_type -217 2501 2282 359 209 0 0 chr10 31051736 31051803 -114537485 - Tigger2 DNA MER2_type -2651 67 1 4124 98 11 21 chr10 31054244 31054429 -114534859 + MER41A LTR ERV1 1 186 -368 2383 96 0 3 chr10 31054429 31054742 -114534546 + AluSx SINE Alu 1 312 0 4124 98 11 21 chr10 31054742 31055116 -114534172 + MER41A LTR ERV1 186 554 0 260 363 14 14 chr10 31055257 31055403 -114533885 + MER5A DNA MER1_type 7 152 -37 2269 65 0 21 chr10 31055530 31055847 -114533441 - AluY SINE Alu 0 311 1 2094 132 3 0 chr10 31056012 31056307 -114532981 + AluSx SINE Alu 1 296 -16 28 0 0 0 chr10 31056408 31056436 -114532852 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr10 31056676 31056699 -114532589 + AT_rich Low_complexity Low_complexity 1 23 0 1136 197 94 23 chr10 31056885 31057351 -114531937 + MLT1E LTR MaLR 1 593 0 450 275 60 71 chr10 31057373 31057819 -114531469 - L1MEd LINE L1 -1032 1458 924 213 39 0 0 chr10 31057960 31057986 -114531302 + (TG)n Simple_repeat Simple_repeat 1 26 0 1931 173 76 6 chr10 31058619 31058960 -114530328 - MLT1A1 LTR MaLR 0 365 1 490 339 39 26 chr10 31059278 31059508 -114529780 + MIR SINE MIR 30 262 0 1679 245 60 23 chr10 31059609 31060090 -114529198 + MLT2B1 LTR ERVL 3 501 -19 300 50 25 0 chr10 31060112 31060152 -114529136 + MLT2B1 LTR ERVL 469 509 -6 2388 80 0 3 chr10 31061933 31062235 -114527053 - AluSg SINE Alu -9 301 1 1889 163 3 0 chr10 31062322 31062616 -114526672 + AluJo SINE Alu 1 295 -17 210 91 0 0 chr10 31063752 31063785 -114525503 + (CA)n Simple_repeat Simple_repeat 2 34 0 2227 92 3 3 chr10 31064418 31064701 -114524587 - AluSp SINE Alu -30 283 1 2250 108 0 0 chr10 31064701 31064997 -114524291 - AluSg1 SINE Alu -13 296 1 2684 55 3 0 chr10 31065539 31065869 -114523419 - L1PA13 LINE L1 -18 6145 5815 1274 109 0 0 chr10 31065874 31066039 -114523249 - AluSg/x SINE Alu -21 291 127 2300 112 0 0 chr10 31066041 31066353 -114522935 - AluSx SINE Alu 0 312 1 2242 83 13 0 chr10 31066355 31066656 -114522632 - L1PA12 LINE L1 -340 5828 5524 203 336 71 9 chr10 31066893 31067006 -114522282 + L2 LINE L2 3148 3267 -5 547 146 22 29 chr10 31067337 31067474 -114521814 + CT-rich Low_complexity Low_complexity 4 139 0 1029 104 0 33 chr10 31067560 31067743 -114521545 + (TTTC)n Simple_repeat Simple_repeat 1 177 0 1708 162 59 4 chr10 31068761 31069033 -114520255 + AluJo SINE Alu 1 287 -25 1765 146 79 0 chr10 31069637 31069904 -114519384 - AluJo SINE Alu -24 288 1 2332 103 0 0 chr10 31069921 31070223 -114519065 + AluSg SINE Alu 1 302 -8 256 343 0 0 chr10 31070229 31070302 -114518986 - L2 LINE L2 -32 3240 3168 597 237 51 32 chr10 31070321 31070574 -114518714 - L1ME4a LINE L1 -210 5911 5654 319 252 59 115 chr10 31071503 31071635 -114517653 - L1ME4a LINE L1 -568 5553 5415 1613 190 3 14 chr10 31071635 31071919 -114517369 - AluJo SINE Alu -30 282 2 319 252 59 115 chr10 31071919 31072035 -114517253 - L1ME4a LINE L1 -706 5415 5294 230 0 33 0 chr10 31072035 31072065 -114517223 + (TC)n Simple_repeat Simple_repeat 2 32 0 * 396 0 0 0 chr10 31072064 31072108 -114517180 + (TG)n Simple_repeat Simple_repeat 1 44 0 319 252 59 115 chr10 31072065 31072128 -114517160 - L1ME4a LINE L1 -826 5295 5299 349 318 105 14 chr10 31072225 31072521 -114516767 - L1ME4a LINE L1 -1083 5063 4741 182 37 37 0 chr10 31074160 31074187 -114515101 + (CAAAAA)n Simple_repeat Simple_repeat 1 28 0 718 154 39 23 chr10 31075564 31075694 -114513594 - FLAM_C SINE Alu -10 133 2 212 196 0 22 chr10 31076260 31076306 -114512982 + CT-rich Low_complexity Low_complexity 3 47 0 751 161 9 34 chr10 31076360 31076590 -114512698 + CT-rich Low_complexity Low_complexity 1 224 0 1675 209 0 0 chr10 31078081 31078363 -114510925 - AluJo SINE Alu -30 282 1 196 229 29 29 chr10 31079101 31079171 -114510117 - L3 LINE CR1 -3 1574 1505 2425 140 56 12 chr10 31080654 31081062 -114508226 - MSTB LTR MaLR 0 426 1 21 0 0 0 chr10 31081758 31081779 -114507509 + AT_rich Low_complexity Low_complexity 1 21 0 2284 100 0 0 chr10 31081853 31082144 -114507144 - AluSx SINE Alu -21 291 1 1475 107 0 15 chr10 31082726 31082932 -114506356 - AluSg/x SINE Alu -11 299 97 790 245 169 8 chr10 31083616 31083925 -114505363 + L1ME2 LINE L1 5681 6052 -112 289 97 0 0 chr10 31083929 31083980 -114505308 + FLAM_A SINE Alu 84 119 -14 245 178 46 11 chr10 31083982 31084156 -114505132 + (TA)n Simple_repeat Simple_repeat 1 180 0 1489 234 3 3 chr10 31084176 31084462 -114504826 - AluJo SINE Alu -26 286 1 232 231 205 0 chr10 31084462 31084540 -114504748 + L1ME3 LINE L1 6039 6132 -30 282 238 42 7 chr10 31084544 31084716 -114504572 + (TA)n Simple_repeat Simple_repeat 1 178 0 190 286 0 0 chr10 31084749 31084798 -114504490 - MIR SINE MIR -7 255 207 180 0 0 0 chr10 31087133 31087153 -114502135 + (T)n Simple_repeat Simple_repeat 1 20 0 1035 159 13 94 chr10 31087618 31087851 -114501437 - MER20 DNA MER1_type -2 217 4 213 200 0 0 chr10 31088346 31088391 -114500897 + G-rich Low_complexity Low_complexity 1 45 0 251 91 0 0 chr10 31088740 31088773 -114500515 + (TTCCC)n Simple_repeat Simple_repeat 4 36 0 485 167 56 19 chr10 31088773 31088935 -114500353 + CT-rich Low_complexity Low_complexity 1 168 0 479 189 0 21 chr10 31088935 31089030 -114500258 - AluJ/FRAM SINE Alu -3 309 217 683 171 8 0 chr10 31089059 31089176 -114500112 - FLAM_C SINE Alu -15 118 1 323 227 21 31 chr10 31090894 31090991 -114498297 + MIR SINE MIR 6 101 -161 1026 165 24 0 chr10 31091005 31091169 -114498119 - FRAM SINE Alu -16 160 1 188 340 106 0 chr10 31091181 31091275 -114498013 + MIR SINE MIR 144 247 -15 564 148 0 137 chr10 31092160 31092343 -114496945 - Charlie5 DNA MER1_type -84 2528 2371 2331 98 0 9 chr10 31093652 31093967 -114495321 + AluSq SINE Alu 1 312 -1 27 0 0 0 chr10 31094073 31094100 -114495188 + AT_rich Low_complexity Low_complexity 1 27 0 327 298 10 10 chr10 31094504 31094625 -114494663 + MIR SINE MIR 32 153 -55 320 348 130 0 chr10 31094625 31094855 -114494433 + MIR SINE MIR 3 262 0 2118 122 10 26 chr10 31094870 31095182 -114494106 - AluSx SINE Alu -5 307 1 236 75 0 25 chr10 31095566 31095606 -114493682 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 2216 118 7 0 chr10 31095949 31096246 -114493042 - AluSg SINE Alu -11 299 1 2206 124 0 9 chr10 31096451 31096766 -114492522 - AluSx SINE Alu 0 312 1 378 236 231 36 chr10 31097252 31097447 -114491841 - L1MC/D LINE L1 -497 5624 5521 1639 175 0 22 chr10 31097964 31098278 -114491010 - AluJo SINE Alu 0 312 6 497 213 0 0 chr10 31098312 31098392 -114490896 - AluJ/FLAM SINE Alu -230 82 3 262 271 0 0 chr10 31099346 31099405 -114489883 - L2 LINE L2 -9 3263 3205 288 335 150 21 chr10 31099947 31100281 -114489007 - L2 LINE L2 -1001 2313 1937 180 0 0 0 chr10 31100498 31100518 -114488770 + (TTTTTA)n Simple_repeat Simple_repeat 2 21 0 940 114 0 66 chr10 31102671 31102838 -114486450 + AluJb SINE Alu 154 309 -3 180 0 0 0 chr10 31102959 31102979 -114486309 + (TAAAAA)n Simple_repeat Simple_repeat 2 21 0 2050 141 79 50 chr10 31103141 31103560 -114485728 + MSTB1 LTR MaLR 2 432 0 319 308 22 75 chr10 31105461 31105688 -114483600 - MIR SINE MIR -25 237 23 1748 199 0 6 chr10 31107468 31107780 -114481508 - AluJb SINE Alu -2 310 1 206 310 26 9 chr10 31108261 31108377 -114480911 - L2 LINE L2 -638 2676 2559 677 219 71 120 chr10 31108662 31108987 -114480301 + L1MD2 LINE L1 5869 6177 -182 1206 164 220 12 chr10 31108999 31109249 -114480039 - AluJb SINE Alu 0 302 1 1298 169 12 0 chr10 31109609 31109851 -114479437 + L1MB4 LINE L1 5935 6179 -1 2352 135 112 0 chr10 31110418 31110803 -114478485 - MSTA LTR MaLR 0 428 1 648 253 66 48 chr10 31111393 31111666 -114477622 - L1ME4a LINE L1 -242 5879 5602 210 255 184 31 chr10 31112902 31113000 -114476288 + L2 LINE L2 3190 3302 -11 838 288 9 4 chr10 31113055 31113288 -114476000 - MIR SINE MIR 0 262 29 21 0 0 0 chr10 31113533 31113554 -114475734 + AT_rich Low_complexity Low_complexity 1 21 0 201 318 0 0 chr10 31113578 31113641 -114475647 + (CATATA)n Simple_repeat Simple_repeat 1 63 0 1295 271 61 76 chr10 31113641 31113949 -114475339 - L1MC4 LINE L1 -128 7914 7603 1536 101 128 130 chr10 31113949 31114325 -114474963 - THE1C LTR MaLR 0 375 1 1295 271 61 76 chr10 31114325 31114754 -114474534 - L1MC4 LINE L1 -439 7603 7188 948 133 95 0 chr10 31115377 31115535 -114473753 + FRAM SINE Alu 1 172 -4 2284 86 0 7 chr10 31116725 31117026 -114472262 - AluY SINE Alu -12 299 1 227 277 102 106 chr10 31117296 31117531 -114471757 - L2 LINE L2 -36 3236 3003 1595 179 69 135 chr10 31117545 31118080 -114471208 - MLT2B1 LTR ERVL 0 520 21 186 143 0 0 chr10 31118172 31118207 -114471081 + (CA)n Simple_repeat Simple_repeat 2 36 0 674 280 75 10 chr10 31118855 31119055 -114470233 - MIR SINE MIR -4 258 46 408 156 0 0 chr10 31119063 31119127 -114470161 + AluS SINE Alu 229 292 -18 1395 232 14 0 chr10 31119151 31119440 -114469848 + AluJb SINE Alu 1 293 -19 242 279 59 0 chr10 31119473 31119541 -114469747 + MIR SINE MIR 34 105 -157 24 0 0 0 chr10 31119927 31119951 -114469337 + AT_rich Low_complexity Low_complexity 1 24 0 360 289 12 52 chr10 31120479 31120568 -114468720 - MIR SINE MIR -17 245 165 2459 231 72 4 chr10 31120568 31121082 -114468206 - MLT1H LTR MaLR 0 549 1 360 289 12 52 chr10 31121082 31121165 -114468123 - MIR SINE MIR -97 165 80 338 165 113 30 chr10 31121854 31121987 -114467301 + L1ME4a LINE L1 5976 6119 -2 185 259 74 0 chr10 31122501 31122555 -114466733 - L3 LINE CR1 -138 1439 1382 327 349 41 30 chr10 31122669 31122838 -114466450 + L2 LINE L2 3102 3272 0 213 39 0 0 chr10 31123386 31123412 -114465876 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 1835 148 21 0 chr10 31123416 31123699 -114465589 - AluJo SINE Alu -23 289 1 655 305 162 11 chr10 31124138 31124509 -114464779 - L3 LINE CR1 -72 1505 1079 1409 195 3 78 chr10 31125127 31125461 -114463827 + AluJo SINE Alu 1 309 -3 217 331 73 53 chr10 31126750 31126901 -114462387 + MIR3 SINE MIR 32 185 -23 379 169 0 0 chr10 31127017 31127076 -114462212 + polypyrimidine Low_complexity Low_complexity 2 60 0 666 209 6 16 chr10 31127077 31127259 -114462029 + CT-rich Low_complexity Low_complexity 1 180 0 1437 213 30 16 chr10 31127262 31127567 -114461721 - AluJo SINE Alu -3 309 1 228 205 31 58 chr10 31128647 31128729 -114460559 - MIR SINE MIR -66 142 61 679 134 0 9 chr10 31129491 31129603 -114459685 + FLAM_C SINE Alu 32 142 -1 236 134 60 90 chr10 31129653 31129720 -114459568 + L1MC4 LINE L1 7923 7987 -55 449 202 64 0 chr10 31129728 31129822 -114459466 - MLT1B LTR MaLR 0 390 291 823 181 7 40 chr10 31129966 31130115 -114459173 + FRAM SINE Alu 1 144 -32 1933 162 27 15 chr10 31131395 31131728 -114457560 - MER44D DNA MER2_type -1 608 2 1225 236 18 60 chr10 31131735 31131857 -114457431 - MLT1A2 LTR MaLR -2 372 246 1881 141 0 72 chr10 31131857 31132191 -114457097 - AluJo SINE Alu -2 310 1 1225 236 18 60 chr10 31132191 31132453 -114456835 - MLT1A2 LTR MaLR -128 246 4 234 186 47 81 chr10 31133315 31133401 -114455887 - MIR SINE MIR -52 210 128 423 346 6 19 chr10 31134338 31134494 -114454794 + MIR3 SINE MIR 52 205 -3 2007 221 10 25 chr10 31135266 31135668 -114453620 - MSTD LTR MaLR 0 396 1 182 300 0 62 chr10 31135779 31135859 -114453429 + MIR SINE MIR 80 154 -108 801 180 4 132 chr10 31136018 31136246 -114453042 + MER20 DNA MER1_type 2 200 -19 2399 84 0 13 chr10 31136335 31136644 -114452644 - AluSg SINE Alu -5 305 1 1415 158 57 4 chr10 31136659 31136905 -114452383 - AluJo SINE Alu -30 282 24 904 231 160 12 chr10 31137082 31137573 -114451715 + LTR50 LTR ERVL 52 731 -64 1590 205 3 3 chr10 31137573 31137861 -114451427 - AluJo SINE Alu -24 288 1 904 231 160 12 chr10 31137861 31137938 -114451350 + LTR50 LTR ERVL 731 795 0 228 167 0 0 chr10 31138392 31138440 -114450848 + (TG)n Simple_repeat Simple_repeat 1 48 0 27 29 0 0 chr10 31138622 31138656 -114450632 + AT_rich Low_complexity Low_complexity 1 34 0 219 170 0 0 chr10 31139652 31139699 -114449589 + (TG)n Simple_repeat Simple_repeat 1 47 0 578 174 35 0 chr10 31139798 31139913 -114449375 + L1M4 LINE L1 4145 4263 -1883 1072 208 51 55 chr10 31140404 31140623 -114448665 + MLT1A1 LTR MaLR 1 219 -146 1482 188 0 8 chr10 31140623 31140878 -114448410 + AluJo SINE Alu 35 287 -25 215 31 31 0 chr10 31140883 31140915 -114448373 + (TAAAA)n Simple_repeat Simple_repeat 3 35 0 1072 208 51 55 chr10 31140915 31141122 -114448166 + MLT1A1 LTR MaLR 223 365 0 22 35 0 0 chr10 31141739 31141768 -114447520 + AT_rich Low_complexity Low_complexity 1 29 0 2334 153 9 3 chr10 31141799 31142145 -114447143 - MER7A DNA MER2_type 0 346 1 193 343 157 10 chr10 31142166 31142268 -114447020 - MIR SINE MIR -76 132 16 667 254 30 12 chr10 31142755 31142924 -114446364 - MER5B DNA MER1_type -4 174 3 900 210 11 6 chr10 31142938 31143114 -114446174 - MER5B DNA MER1_type -1 177 1 307 299 287 0 chr10 31143442 31143609 -114445679 - MIR SINE MIR 0 262 48 360 58 29 43 chr10 31145044 31145113 -114444175 + (TTTC)n Simple_repeat Simple_repeat 2 69 0 2899 130 7 31 chr10 31145225 31145670 -114443618 + MER57B LTR ERV1 1 434 0 384 40 0 0 chr10 31146423 31146473 -114442815 + (CA)n Simple_repeat Simple_repeat 2 51 0 34 42 0 0 chr10 31146661 31146709 -114442579 + AT_rich Low_complexity Low_complexity 1 48 0 713 272 58 73 chr10 31146809 31147273 -114442015 + LTR16A LTR ERVL 1 450 0 3861 153 14 16 chr10 31147450 31148085 -114441203 + L1PA16 LINE L1 5520 6153 -13 32 0 0 0 chr10 31148672 31148704 -114440584 + AT_rich Low_complexity Low_complexity 1 32 0 1743 177 3 25 chr10 31149326 31149642 -114439646 + AluJo SINE Alu 1 309 -3 224 254 51 0 chr10 31150051 31150110 -114439178 + L2 LINE L2 3211 3272 0 562 167 0 67 chr10 31150138 31150258 -114439030 + FLAM_C SINE Alu 2 113 -30 3844 125 12 4 chr10 31151265 31151827 -114437461 - L1PB3 LINE L1 -3 6151 5585 455 340 34 10 chr10 31151832 31152038 -114437250 - MIR SINE MIR -50 212 2 439 322 20 7 chr10 31153497 31153643 -114435645 - MIR SINE MIR -97 165 18 26 50 0 0 chr10 31153668 31153708 -114435580 + AT_rich Low_complexity Low_complexity 1 40 0 3918 88 27 8 chr10 31153724 31154250 -114435038 - L1PA10 LINE L1 -1 6167 5632 277 299 35 0 chr10 31154509 31154596 -114434692 + MIR SINE MIR 67 156 -106 320 125 4 2 chr10 31154596 31154852 -114434436 + AluSx SINE Alu 1 299 -2 205 364 45 0 chr10 31155382 31155470 -114433818 + MIR SINE MIR 81 172 -90 2264 103 3 0 chr10 31155526 31155826 -114433462 + AluSx SINE Alu 1 301 -11 248 267 221 0 chr10 31155879 31155965 -114433323 + L2 LINE L2 3166 3270 -2 1854 121 452 11 chr10 31156085 31156525 -114432763 + MER51A LTR ERV1 1 634 0 596 135 31 0 chr10 31156666 31156762 -114432526 - L1MD1 LINE L1 0 6242 6144 1718 196 3 3 chr10 31156764 31157086 -114432202 - L1MD1 LINE L1 -267 5975 5654 267 217 116 14 chr10 31157086 31157155 -114432133 + MLT1J1 LTR MaLR 347 422 -24 539 153 73 56 chr10 31157287 31157439 -114431849 - MIR SINE MIR -2 260 103 1695 151 15 11 chr10 31157476 31157747 -114431541 + THE1B LTR MaLR 93 364 0 300 194 21 21 chr10 31157747 31157840 -114431448 - L1MCc LINE L1 -5058 2064 1972 6607 131 70 37 chr10 31157846 31158565 -114430723 + Tigger3b DNA MER2_type 2 777 -2251 4498 112 41 2 chr10 31158565 31159181 -114430107 + LTR9B LTR ERV1 5 644 0 6607 131 70 37 chr10 31159181 31159651 -114429637 + Tigger3b DNA MER2_type 777 1230 -1 2477 75 0 7 chr10 31159672 31159980 -114429308 + AluY SINE Alu 1 306 -5 273 266 0 0 chr10 31160018 31160082 -114429206 + CT-rich Low_complexity Low_complexity 1 64 0 758 261 70 40 chr10 31160088 31160360 -114428928 - L1M4 LINE L1 -2076 4070 3791 2049 263 97 13 chr10 31160360 31160907 -114428381 + MLT1E LTR MaLR 1 593 0 1135 272 262 15 chr10 31160914 31161392 -114427896 + MLT1E-int LTR MaLR 9 627 -744 643 283 21 16 chr10 31161594 31161785 -114427503 + MLT1E-int LTR MaLR 692 883 -488 935 235 77 98 chr10 31161896 31162313 -114426975 + MLT1E-int LTR MaLR 964 1371 0 1041 278 35 82 chr10 31162321 31162530 -114426758 + MLT1E LTR MaLR 37 219 -374 2271 136 0 0 chr10 31162530 31162840 -114426448 + AluSx SINE Alu 1 310 -2 1041 278 35 82 chr10 31162840 31163033 -114426255 + MLT1E LTR MaLR 219 420 -173 821 201 23 23 chr10 31163043 31163217 -114426071 + MLT1E LTR MaLR 1 174 -331 3183 271 73 24 chr10 31163220 31164635 -114424653 - L1MEc LINE L1 -4317 2079 562 1536 204 73 14 chr10 31164635 31165003 -114424285 + MLT1B LTR MaLR 1 390 0 3183 271 73 24 chr10 31165003 31165555 -114423733 - L1MEc LINE L1 -5834 562 39 711 271 83 22 chr10 31165557 31165964 -114423324 - L1MCc LINE L1 -4887 1536 1129 371 344 13 7 chr10 31166368 31166519 -114422769 - L1MCc LINE L1 -6009 414 263 200 203 0 54 chr10 31167174 31167248 -114422040 + T-rich Low_complexity Low_complexity 2 71 0 853 134 0 15 chr10 31167406 31167540 -114421748 + AluSg/x SINE Alu 178 309 -1 281 330 106 37 chr10 31167584 31167802 -114421486 - MIR SINE MIR -7 255 23 3907 102 86 3 chr10 31168040 31168635 -114420653 + LTR9B LTR ERV1 1 644 0 655 207 67 16 chr10 31168739 31168932 -114420356 + L1ME2 LINE L1 5953 6155 -9 246 81 0 0 chr10 31168936 31168973 -114420315 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 1495 196 7 18 chr10 31168976 31169252 -114420036 - AluJo SINE Alu -30 282 10 387 0 0 0 chr10 31169272 31169315 -114419973 + (CA)n Simple_repeat Simple_repeat 2 44 0 2244 105 0 0 chr10 31169323 31169609 -114419679 - AluSc SINE Alu -23 286 1 445 159 30 50 chr10 31170830 31170968 -114418320 + MER51A LTR ERV1 1 136 -241 286 105 0 53 chr10 31170982 31171039 -114418249 + MER51B LTR ERV1 109 162 -215 * 1723 121 40 62 chr10 31171031 31171129 -114418159 + MER51B LTR ERV1 63 162 -215 2103 121 7 0 chr10 31171129 31171426 -114417862 + AluSx SINE Alu 1 299 -13 1723 121 40 62 chr10 31171426 31171649 -114417639 + MER51B LTR ERV1 162 377 0 261 83 0 0 chr10 31171897 31171933 -114417355 + (T)n Simple_repeat Simple_repeat 1 36 0 1892 137 0 34 chr10 31174176 31174469 -114414819 + AluSq SINE Alu 1 283 -30 2150 98 3 0 chr10 31175663 31175950 -114413338 + AluSq SINE Alu 23 310 -3 493 256 83 24 chr10 31176069 31176237 -114413051 + MIR SINE MIR 11 188 -74 374 240 10 30 chr10 31176661 31176761 -114412527 + MER5A DNA MER1_type 9 106 -83 1527 198 35 35 chr10 31176794 31177162 -114412126 + MLT1A2 LTR MaLR 7 374 0 387 74 0 0 chr10 31177192 31177246 -114412042 - MADE1 DNA Mariner -26 54 1 383 186 93 0 chr10 31178724 31178821 -114410467 + MER5A DNA MER1_type 4 109 -80 455 117 0 0 chr10 31178848 31178908 -114410380 + AluJ/FRAM SINE Alu 226 285 -27 272 305 54 121 chr10 31179871 31180094 -114409194 + MIR SINE MIR 30 237 -25 2151 130 0 0 chr10 31181208 31181508 -114407780 + AluSx SINE Alu 1 300 -12 520 319 51 54 chr10 31182222 31182382 -114406906 + L3 LINE CR1 431 591 -986 2184 119 0 7 chr10 31182382 31182677 -114406611 - AluSq SINE Alu -18 295 3 520 319 51 54 chr10 31182677 31182830 -114406458 + L3 LINE CR1 591 743 -834 688 236 31 12 chr10 31183458 31183619 -114405669 + FRAM SINE Alu 3 166 0 247 243 54 0 chr10 31183727 31183801 -114405487 + L2 LINE L2 2897 2974 -298 1498 184 4 23 chr10 31184168 31184429 -114404859 + AluJo SINE Alu 1 256 -56 213 319 59 50 chr10 31184735 31184854 -114404434 + MIR3 SINE MIR 58 177 -31 2453 80 18 108 chr10 31185026 31185426 -114403862 - THE1B LTR MaLR 0 364 1 2467 67 0 3 chr10 31185694 31185992 -114403296 + AluY SINE Alu 1 297 -14 431 280 37 37 chr10 31186397 31186595 -114402693 + MIR SINE MIR 32 231 -31 328 257 124 45 chr10 31186752 31187130 -114402158 - LTR33 LTR ERVL -19 502 24 3511 127 79 99 chr10 31187355 31188156 -114401132 - LTR1 LTR ERV1 0 785 1 1947 129 0 4 chr10 31189673 31189944 -114399344 + AluSx SINE Alu 12 281 -31 22 0 0 0 chr10 31191399 31191421 -114397867 + AT_rich Low_complexity Low_complexity 1 22 0 1754 184 0 0 chr10 31191606 31191914 -114397374 + AluJo SINE Alu 1 308 0 23 33 0 0 chr10 31193034 31193064 -114396224 + AT_rich Low_complexity Low_complexity 1 30 0 217 259 138 16 chr10 31193129 31193223 -114396065 + MIR SINE MIR 98 200 -62 1028 224 105 119 chr10 31193483 31193904 -114395384 + MLT1G LTR MaLR 12 424 -166 1859 132 0 3 chr10 31193904 31194200 -114395088 + L1MA6 LINE L1 6006 6300 0 1028 224 105 119 chr10 31194200 31194357 -114394931 + MLT1G LTR MaLR 424 582 -8 261 282 0 0 chr10 31194813 31194884 -114394404 + MIR SINE MIR 172 242 -20 1868 149 7 19 chr10 31195674 31195982 -114393306 - AluJo SINE Alu -8 304 1 388 250 0 0 chr10 31196409 31196501 -114392787 + MIR SINE MIR 166 257 -5 193 318 36 45 chr10 31196507 31196617 -114392671 - MIR SINE MIR -95 167 59 2043 130 0 3 chr10 31196758 31197071 -114392217 + AluSx SINE Alu 1 312 0 240 163 0 0 chr10 31197320 31197363 -114391925 + A-rich Low_complexity Low_complexity 1 43 0 2188 130 0 0 chr10 31199488 31199787 -114389501 + AluSx SINE Alu 1 299 -13 1491 103 121 52 chr10 31200528 31200800 -114388488 + AluSx SINE Alu 1 291 -21 1471 196 33 33 chr10 31201262 31201563 -114387725 + AluJo SINE Alu 1 301 -1 1712 139 161 60 chr10 31202087 31202142 -114387146 - MER4A LTR ERV1 0 664 616 2436 106 0 0 chr10 31202142 31202454 -114386834 + AluSx SINE Alu 1 312 0 1712 139 161 60 chr10 31202454 31202764 -114386524 - MER4A LTR ERV1 -48 616 262 564 96 32 21 chr10 31202767 31202861 -114386427 - MER4A LTR ERV1 -569 95 1 322 194 9 9 chr10 31203726 31203834 -114385454 + GA-rich Low_complexity Low_complexity 1 108 0 307 283 158 26 chr10 31204015 31204167 -114385121 - MER5A DNA MER1_type 0 189 18 2391 86 6 13 chr10 31204315 31204629 -114384659 - AluSx SINE Alu 0 312 1 1518 178 48 7 chr10 31204655 31205026 -114384262 + AluJo SINE Alu 2 383 0 2486 63 7 0 chr10 31205112 31205414 -114383874 + AluY SINE Alu 1 304 -7 183 258 24 97 chr10 31205758 31205882 -114383406 - MIR SINE MIR -64 144 30 1717 168 40 23 chr10 31206202 31206506 -114382782 - AluJo SINE Alu -3 309 1 439 259 0 30 chr10 31206506 31206637 -114382651 - MIR SINE MIR -38 224 98 1379 277 138 31 chr10 31206648 31206704 -114382584 - MLT1G1 LTR MaLR -5 590 541 2448 72 0 3 chr10 31206704 31206997 -114382291 + AluSc SINE Alu 1 292 -17 1379 277 138 31 chr10 31206997 31207460 -114381828 - MLT1G1 LTR MaLR -54 541 15 202 294 88 0 chr10 31207484 31207552 -114381736 - MIR SINE MIR -175 87 14 662 142 126 24 chr10 31207765 31207892 -114381396 + FLAM_C SINE Alu 3 142 -1 260 343 20 10 chr10 31207904 31208003 -114381285 - MER5A DNA MER1_type -5 184 85 1813 155 17 31 chr10 31208009 31208300 -114380988 + AluJo SINE Alu 1 287 -25 184 341 22 22 chr10 31208315 31208406 -114380882 - MER5A DNA MER1_type -92 97 7 782 285 141 52 chr10 31208414 31208909 -114380379 + LTR67 LTR ERVL 5 543 -14 1571 157 80 0 chr10 31209068 31209342 -114379946 - AluJo SINE Alu -16 296 1 2563 40 7 0 chr10 31209403 31209699 -114379589 - AluY SINE Alu -13 298 1 615 223 0 8 chr10 31209917 31210038 -114379250 + FLAM_A SINE Alu 2 121 -12 2385 104 0 0 chr10 31210550 31210881 -114378407 - AluSx SINE Alu 0 312 1 1399 220 300 3 chr10 31211013 31211626 -114377662 + LTR50 LTR ERVL 1 795 0 662 213 0 16 chr10 31211780 31211907 -114377381 + FLAM_C SINE Alu 2 126 -17 462 275 8 22 chr10 31212552 31212788 -114376500 + L1MDa LINE L1 1259 1499 -5031 908 231 17 54 chr10 31212891 31213189 -114376099 + L1MA9 LINE L1 5996 6282 -30 2282 122 0 0 chr10 31213279 31213591 -114375697 - AluSx SINE Alu 0 312 1 363 286 51 34 chr10 31213838 31214013 -114375275 - MIR SINE MIR -15 247 70 1638 164 47 89 chr10 31214613 31215064 -114374224 - MSTB1 LTR MaLR 0 432 1 461 320 144 19 chr10 31215428 31215740 -114373548 + L2 LINE L2 2959 3309 -4 282 95 0 0 chr10 31217458 31217500 -114371788 + (CA)n Simple_repeat Simple_repeat 1 42 0 198 0 0 0 chr10 31217499 31217521 -114371767 + (GA)n Simple_repeat Simple_repeat 2 23 0 * 187 318 45 11 chr10 31217823 31217911 -114371377 + L2 LINE L2 3182 3272 -41 300 281 45 0 chr10 31218074 31218163 -114371125 - L1MC4 LINE L1 -1337 6705 6613 267 152 0 0 chr10 31218163 31218209 -114371079 + (TA)n Simple_repeat Simple_repeat 1 46 0 186 103 0 0 chr10 31218208 31218237 -114371051 + (GA)n Simple_repeat Simple_repeat 2 30 0 * 1607 187 3 7 chr10 31218239 31218522 -114370766 - AluJo SINE Alu -30 282 1 440 303 77 0 chr10 31218685 31218840 -114370448 + MIR SINE MIR 81 247 -15 204 227 23 0 chr10 31219548 31219592 -114369696 - L2 LINE L2 -14 3258 3214 198 267 44 22 chr10 31219601 31219691 -114369597 - L2 LINE L2 -1254 2060 1969 218 254 28 0 chr10 31221789 31221860 -114367428 + L2 LINE L2 3201 3273 -40 739 253 178 18 chr10 31222054 31222442 -114366846 + MLT1J2 LTR MaLR 1 450 0 253 253 53 0 chr10 31222819 31222894 -114366394 + A-rich Low_complexity Low_complexity 4 82 0 2347 88 14 0 chr10 31223612 31223909 -114365379 - AluSc SINE Alu -7 302 2 428 274 76 32 chr10 31225104 31225261 -114364027 - L2 LINE L2 0 3313 3150 573 215 5 126 chr10 31226959 31227150 -114362138 + MLT1A1 LTR MaLR 198 365 0 1556 165 11 37 chr10 31227285 31227558 -114361730 - MLT1A1 LTR MaLR 0 365 100 2491 70 0 0 chr10 31228872 31229171 -114360117 - AluY SINE Alu -12 299 1 268 170 64 32 chr10 31229774 31229868 -114359420 - MER113 DNA MER1_type? -405 116 20 1650 151 33 15 chr10 31230531 31230826 -114358462 + AluJo SINE Alu 7 306 0 252 0 0 0 chr10 31231556 31231584 -114357704 + (CA)n Simple_repeat Simple_repeat 1 28 0 5123 132 30 6 chr10 31231617 31232421 -114356867 + L1PA16 LINE L1 5344 6166 0 225 71 0 0 chr10 31232428 31232456 -114356832 + AluSp SINE Alu 7 34 -266 1885 77 6 144 chr10 31232456 31232782 -114356506 + AluSp SINE Alu 18 298 -15 405 58 0 0 chr10 31232864 31232916 -114356372 + (TG)n Simple_repeat Simple_repeat 1 52 0 626 308 21 17 chr10 31233450 31233684 -114355604 - MIR SINE MIR 0 262 28 5076 131 8 24 chr10 31234050 31234846 -114354442 + LTR39 LTR ERV1 1 783 0 2335 109 0 0 chr10 31235013 31235317 -114353971 + AluSg SINE Alu 1 304 -6 2400 169 17 21 chr10 31235876 31236076 -114353212 + MSTB LTR MaLR 1 200 -226 2259 113 3 0 chr10 31236076 31236385 -114352903 + AluSx SINE Alu 1 310 -2 2400 169 17 21 chr10 31236385 31236604 -114352684 + MSTB LTR MaLR 200 418 -8 1183 214 105 27 chr10 31237165 31237616 -114351672 + MLT1E LTR MaLR 3 557 -31 1739 108 0 9 chr10 31237646 31237877 -114351411 - AluSx SINE Alu -83 229 1 320 225 11 0 chr10 31240014 31240103 -114349185 + GA-rich Low_complexity Low_complexity 1 90 0 637 174 35 99 chr10 31240126 31240197 -114349091 - MLT1A2 LTR MaLR -213 161 87 2555 66 7 0 chr10 31240197 31240500 -114348788 + AluY SINE Alu 1 305 -6 637 174 35 99 chr10 31240500 31240600 -114348688 - MLT1A2 LTR MaLR -287 87 1 1618 293 13 14 chr10 31240603 31241225 -114348063 - L2 LINE L2 -2004 1310 690 1830 200 36 34 chr10 31241226 31241660 -114347628 + LTR37B LTR ERV1 7 444 -24 2122 123 19 16 chr10 31241660 31241970 -114347318 - AluSx SINE Alu -1 311 1 1129 279 57 36 chr10 31242004 31242095 -114347193 - L2 LINE L2 -2618 696 608 2353 96 3 0 chr10 31242095 31242397 -114346891 + AluSx SINE Alu 1 303 -9 1129 279 57 36 chr10 31242397 31242725 -114346563 - L2 LINE L2 -2706 608 268 552 128 10 78 chr10 31242817 31242916 -114346372 + MLT1B LTR MaLR 1 92 -298 1285 189 60 91 chr10 31242916 31243291 -114345997 - MLT1A1 LTR MaLR -2 426 1 1020 184 148 41 chr10 31243292 31243352 -114345936 + MLT1B LTR MaLR 91 143 -247 2304 99 0 0 chr10 31243352 31243645 -114345643 - AluSq SINE Alu -20 293 1 1020 184 148 41 chr10 31243645 31243855 -114345433 + MLT1B LTR MaLR 143 390 0 288 29 0 0 chr10 31244150 31244185 -114345103 + MADE1 DNA Mariner 2 36 -44 2268 111 0 3 chr10 31244925 31245232 -114344056 + AluSx SINE Alu 1 306 -6 2360 114 48 69 chr10 31245752 31245974 -114343314 - MSTC LTR MaLR 0 428 203 2214 128 0 3 chr10 31245974 31246286 -114343002 - AluSx SINE Alu -1 311 1 2360 114 48 69 chr10 31246286 31246399 -114342889 - MSTC LTR MaLR -225 203 102 2338 114 3 0 chr10 31246399 31246707 -114342581 - AluSx SINE Alu -3 309 1 2360 114 48 69 chr10 31246707 31246807 -114342481 - MSTC LTR MaLR -326 102 1 213 265 0 0 chr10 31248052 31248101 -114341187 + (GGCTG)n Simple_repeat Simple_repeat 5 53 0 26 30 0 0 chr10 31249746 31249779 -114339509 + AT_rich Low_complexity Low_complexity 1 33 0 1781 175 0 16 chr10 31249782 31250085 -114339203 - AluJo SINE Alu -14 298 1 2313 108 36 28 chr10 31250497 31250858 -114338430 + THE1B LTR MaLR 1 364 0 2198 116 0 0 chr10 31252534 31252819 -114336469 + AluSg SINE Alu 9 293 -17 22 56 0 0 chr10 31253177 31253213 -114336075 + AT_rich Low_complexity Low_complexity 1 36 0 456 296 74 40 chr10 31253352 31253649 -114335639 - L2 LINE L2 -2 3311 3005 213 121 0 0 chr10 31253747 31253780 -114335508 + (CA)n Simple_repeat Simple_repeat 2 34 0 916 130 0 0 chr10 31254111 31254234 -114335054 + FRAM SINE Alu 30 152 -24 1315 81 0 0 chr10 31254514 31254688 -114334600 - L1MA1 LINE L1 0 6302 6129 1980 107 0 86 chr10 31255645 31255971 -114333317 + AluSq SINE Alu 1 298 -15 2358 100 3 0 chr10 31256293 31256603 -114332685 - AluSx SINE Alu -1 311 1 313 235 10 10 chr10 31256628 31256730 -114332558 + CT-rich Low_complexity Low_complexity 3 104 0 264 372 19 29 chr10 31256868 31257059 -114332229 - MIR SINE MIR -55 207 19 202 353 49 38 chr10 31257143 31257327 -114331961 - MER5A DNA MER1_type -1 188 3 758 219 44 11 chr10 31257928 31258111 -114331177 - MER5A DNA MER1_type 0 189 1 2307 100 10 0 chr10 31258269 31258570 -114330718 + AluSx SINE Alu 1 304 -8 2077 138 33 30 chr10 31259270 31259632 -114329656 + THE1B LTR MaLR 2 364 0 2273 86 0 26 chr10 31260101 31260404 -114328884 - AluSp SINE Alu -16 297 3 305 280 21 29 chr10 31260709 31260823 -114328465 + MIR3 SINE MIR 67 180 -28 1728 281 156 7 chr10 31261289 31261764 -114327524 + HAL1 LINE L1 2 405 -2102 1739 128 55 14 chr10 31261764 31262053 -114327235 + AluJo SINE Alu 5 305 -7 1728 281 156 7 chr10 31262053 31262328 -114326960 + HAL1 LINE L1 405 864 -1643 198 0 0 0 chr10 31262346 31262368 -114326920 + (TA)n Simple_repeat Simple_repeat 2 23 0 657 285 51 5 chr10 31262763 31262977 -114326311 - MIR SINE MIR -13 249 26 25 0 0 0 chr10 31263074 31263099 -114326189 + AT_rich Low_complexity Low_complexity 1 25 0 644 303 82 22 chr10 31263117 31263484 -114325804 - L1ME LINE L1 -342 5779 5391 1700 174 23 48 chr10 31264035 31264345 -114324943 - AluJo SINE Alu -10 302 1 471 78 0 0 chr10 31265073 31265137 -114324151 + (CATTT)n Simple_repeat Simple_repeat 2 65 0 1886 133 0 14 chr10 31265138 31265424 -114323864 - AluJb SINE Alu -30 282 1 1282 62 0 19 chr10 31265463 31265653 -114323635 + AluSp SINE Alu 129 315 0 318 290 19 37 chr10 31266652 31266814 -114322474 + MLT1L LTR MaLR 22 180 -435 2228 116 7 0 chr10 31266837 31267147 -114322141 - AluSx SINE Alu 0 312 1 270 267 99 30 chr10 31267246 31267347 -114321941 + MLT1L LTR MaLR 371 478 -137 2324 105 0 0 chr10 31267680 31267976 -114321312 + AluSq SINE Alu 1 296 -17 232 121 0 0 chr10 31267993 31268026 -114321262 - LTR54 LTR ERV1 -71 439 407 1326 105 6 11 chr10 31268066 31268247 -114321041 - L1PB1 LINE L1 0 6151 5972 373 231 0 0 chr10 31268483 31268561 -114320727 - MER116 DNA Mariner -1 79 2 1598 150 31 69 chr10 31268993 31269313 -114319975 + AluJb SINE Alu 1 308 -4 373 229 108 90 chr10 31269327 31269400 -114319888 + L1ME4a LINE L1 5600 5670 -451 308 64 21 0 chr10 31269400 31269447 -114319841 + (TAGA)n Simple_repeat Simple_repeat 1 48 0 2072 109 22 0 chr10 31269454 31269729 -114319559 + AluSx SINE Alu 10 290 -22 373 229 108 90 chr10 31269729 31269750 -114319538 + L1ME4a LINE L1 5675 5694 -427 399 41 0 0 chr10 31269750 31269799 -114319489 + (TAGA)n Simple_repeat Simple_repeat 4 52 0 373 229 108 90 chr10 31269799 31269918 -114319370 + L1ME4a LINE L1 5694 5826 -295 378 241 34 87 chr10 31269976 31270183 -114319105 + L2 LINE L2 3107 3302 -11 2026 142 0 3 chr10 31270640 31270951 -114318337 + AluJo SINE Alu 1 310 -2 1404 157 35 4 chr10 31271521 31271751 -114317537 - AluJo SINE Alu -5 307 71 589 285 23 50 chr10 31271822 31272043 -114317245 - MIR SINE MIR -11 251 37 393 22 0 0 chr10 31273117 31273163 -114316125 + (TG)n Simple_repeat Simple_repeat 1 46 0 2217 105 34 0 chr10 31273302 31273598 -114315690 + AluSx SINE Alu 1 306 -6 347 354 88 32 chr10 31273628 31273802 -114315486 + L2 LINE L2 1734 1897 -1417 528 160 118 25 chr10 31273802 31273921 -114315367 - MER94 DNA DNA -4 130 1 347 354 88 32 chr10 31273921 31274314 -114314974 + L2 LINE L2 1897 2341 -973 2119 113 10 0 chr10 31274314 31274605 -114314683 + AluSx SINE Alu 1 294 -18 347 354 88 32 chr10 31274605 31274658 -114314630 + L2 LINE L2 2341 2390 -924 313 249 46 19 chr10 31274724 31274848 -114314440 + MLT1H LTR MaLR 437 555 0 388 280 102 47 chr10 31275737 31275973 -114313315 + MLT1H LTR MaLR 4 252 -297 357 198 47 93 chr10 31276047 31276216 -114313072 + MLT1H LTR MaLR 387 552 -3 697 113 9 9 chr10 31276472 31276587 -114312701 + HSMAR2 DNA Mariner 1186 1300 -2 3761 156 61 119 chr10 31276653 31277575 -114311713 + MER21A LTR ERV1 36 903 -28 763 255 42 42 chr10 31277880 31278119 -114311169 - MLT1C LTR MaLR -22 445 207 840 163 0 15 chr10 31278120 31278255 -114311033 - FLAM_C SINE Alu 0 133 1 1701 168 3 34 chr10 31278451 31278742 -114310546 - AluJo SINE Alu -30 282 1 660 262 2 3 chr10 31278746 31278899 -114310389 - MLT1C LTR MaLR -215 175 22 223 257 19 67 chr10 31278944 31279049 -114310239 + L2 LINE L2 2773 2872 -442 1313 112 0 11 chr10 31279499 31279678 -114309610 + AluSg/x SINE Alu 84 260 -52 946 176 106 10 chr10 31279982 31280181 -114309107 + L1PB4 LINE L1 5895 6112 -44 1257 265 75 43 chr10 31280334 31280802 -114308486 - LTR33 LTR ERVL -38 483 1 485 284 32 42 chr10 31280890 31281080 -114308208 - MIR3 SINE MIR -7 201 14 222 37 0 0 chr10 31281863 31281890 -114307398 + (GTTTG)n Simple_repeat Simple_repeat 2 28 0 300 320 96 0 chr10 31282194 31282319 -114306969 - L2 LINE L2 0 3272 3136 542 245 41 54 chr10 31282516 31282663 -114306625 + MIR SINE MIR 10 154 -108 2153 101 24 0 chr10 31282965 31283252 -114306036 + AluSp SINE Alu 1 294 -19 786 156 16 0 chr10 31283281 31283403 -114305885 + FLAM_C SINE Alu 1 124 -19 1688 135 43 46 chr10 31283608 31283911 -114305377 + AluSx SINE Alu 1 302 -10 1858 153 0 27 chr10 31284763 31285064 -114304224 + AluSx SINE Alu 1 293 -19 1440 156 36 57 chr10 31285899 31286200 -114303088 - AluJo SINE Alu -16 296 2 261 83 0 0 chr10 31286200 31286236 -114303052 + (A)n Simple_repeat Simple_repeat 1 36 0 403 231 146 75 chr10 31286273 31286594 -114302694 - L1MC5 LINE L1 -66 7895 7552 990 200 25 10 chr10 31286608 31286808 -114302480 + AluJb SINE Alu 86 288 -24 418 285 106 22 chr10 31286835 31287156 -114302132 - L1MC5 LINE L1 -415 7393 7261 1152 249 63 92 chr10 31287194 31287786 -114301502 - L1MC4 LINE L1 -733 7228 6668 979 276 47 17 chr10 31287878 31288284 -114301004 - L1 LINE L1 -1710 4436 4019 243 0 0 0 chr10 31288291 31288318 -114300970 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 561 131 0 0 chr10 31288320 31288404 -114300884 - AluY SINE Alu -10 301 218 403 209 89 73 chr10 31288438 31288629 -114300659 - L1 LINE L1 -2157 3989 3796 380 304 0 0 chr10 31289718 31289843 -114299445 + (CCA)n Simple_repeat Simple_repeat 2 126 0 307 320 0 0 chr10 31290098 31290201 -114299087 + (CCA)n Simple_repeat Simple_repeat 2 104 0 332 226 47 28 chr10 31290460 31290566 -114298722 - L3b LINE CR1 -188 1395 1288 604 266 54 33 chr10 31291769 31291953 -114297335 + MIR SINE MIR 64 251 -11 1947 119 11 0 chr10 31292420 31292698 -114296590 + AluSx SINE Alu 1 281 -31 276 53 0 0 chr10 31292701 31292739 -114296549 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 209 185 37 0 chr10 31292811 31292865 -114296423 + L2 LINE L2 2572 2627 -687 754 141 92 43 chr10 31292865 31293028 -114296260 + MER49 LTR ERV1 1 171 -752 * 3015 126 61 18 chr10 31293009 31293502 -114295786 + MER49 LTR ERV1 410 923 0 473 297 102 95 chr10 31293502 31293756 -114295532 + L2 LINE L2 2624 2875 -397 2174 109 3 3 chr10 31293756 31294050 -114295238 - AluSx SINE Alu -18 294 1 473 297 102 95 chr10 31294050 31294133 -114295155 + L2 LINE L2 2875 2956 -316 1722 172 43 20 chr10 31294133 31294435 -114294853 - AluJb SINE Alu -1 311 3 473 297 102 95 chr10 31294435 31294717 -114294571 + L2 LINE L2 2956 3266 -6 1929 135 80 0 chr10 31295075 31295364 -114293924 - AluSx SINE Alu 0 312 1 1502 229 3 0 chr10 31295797 31296107 -114293181 - L1PB4 LINE L1 0 6156 5846 1068 158 0 18 chr10 31296120 31296291 -114292997 - FRAM SINE Alu -16 160 1 2278 140 0 3 chr10 31296291 31296641 -114292647 - L1PB4 LINE L1 -338 5818 5470 1069 173 42 5 chr10 31296650 31296841 -114292447 + AluJo SINE Alu 85 282 -30 1272 274 102 19 chr10 31298345 31298808 -114290480 - MLT1H1 LTR MaLR -54 501 1 841 156 0 0 chr10 31298975 31299110 -114290178 + FRAM SINE Alu 38 172 -4 381 22 0 0 chr10 31300166 31300212 -114289076 + (TG)n Simple_repeat Simple_repeat 2 47 0 445 273 79 0 chr10 31300644 31300783 -114288505 - MIR SINE MIR -47 215 66 562 266 0 8 chr10 31300783 31300911 -114288377 + MLT1F LTR MaLR 1 127 -415 * 820 220 46 28 chr10 31300909 31301164 -114288124 + MLT1F LTR MaLR 244 505 0 1964 155 135 26 chr10 31301613 31301999 -114287289 + MSTA LTR MaLR 1 428 0 403 248 115 32 chr10 31302206 31302363 -114286925 + MIR SINE MIR 14 183 -79 338 258 11 11 chr10 31302366 31302455 -114286833 - L2 LINE L2 -1 3312 3224 2236 90 0 17 chr10 31302457 31302757 -114286531 + AluSx SINE Alu 1 295 -17 316 183 0 108 chr10 31302784 31302877 -114286411 + MIR SINE MIR 180 262 0 576 191 0 25 chr10 31303607 31303764 -114285524 + CT-rich Low_complexity Low_complexity 3 155 0 372 333 97 6 chr10 31304458 31304671 -114284617 - MIR SINE MIR -28 234 3 185 204 0 56 chr10 31304767 31304821 -114284467 - MIR SINE MIR -84 178 128 1650 179 3 17 chr10 31304826 31305122 -114284166 + AluJo SINE Alu 2 293 -19 313 200 0 113 chr10 31305465 31305545 -114283743 - AluSx SINE Alu -25 277 219 927 135 30 0 chr10 31305545 31305678 -114283610 - AluSx SINE Alu -176 137 1 2065 139 0 3 chr10 31305726 31306035 -114283253 - AluJb SINE Alu -4 308 1 504 184 73 18 chr10 31306087 31306196 -114283092 + LTR67 LTR ERVL 435 549 -8 23 33 0 0 chr10 31306207 31306237 -114283051 + AT_rich Low_complexity Low_complexity 1 30 0 828 258 163 79 chr10 31306670 31307162 -114282126 - MLT1H LTR MaLR -16 533 1 956 139 0 0 chr10 31307183 31307312 -114281976 + FLAM_C SINE Alu 2 130 -3 29 78 0 0 chr10 31307312 31307376 -114281912 + AT_rich Low_complexity Low_complexity 1 64 0 216 0 0 0 chr10 31308247 31308271 -114281017 + (A)n Simple_repeat Simple_repeat 1 24 0 2236 66 30 30 chr10 31309382 31309683 -114279605 - AluY SINE Alu -10 301 1 1073 125 19 0 chr10 31310025 31310185 -114279103 - AluY SINE Alu -18 293 131 229 65 0 0 chr10 31310197 31310243 -114279045 - LTR66 LTR ERVL -171 439 394 1019 53 38 8 chr10 31310276 31310407 -114278881 - AluY SINE Alu -176 135 1 1391 163 40 0 chr10 31311071 31311298 -114277990 - MER46A DNA MER2_type 0 236 1 6421 129 18 42 chr10 31311303 31312300 -114276988 - L1MA6 LINE L1 -1 6299 5335 2171 119 3 0 chr10 31312300 31312594 -114276694 - AluSp SINE Alu -15 298 4 6421 129 18 42 chr10 31312594 31313526 -114275762 - L1MA6 LINE L1 -965 5335 4382 257 0 30 0 chr10 31314776 31314809 -114274479 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 5102 192 22 23 chr10 31315389 31316700 -114272588 + L1MD1 LINE L1 3974 5286 -956 2019 77 29 93 chr10 31316700 31317011 -114272277 + AluY SINE Alu 1 291 -20 5102 192 22 23 chr10 31317011 31317537 -114271751 + L1MD1 LINE L1 5286 5821 -421 2319 115 0 3 chr10 31317537 31317850 -114271438 + AluSx SINE Alu 1 312 0 5102 192 22 23 chr10 31317850 31318020 -114271268 + L1MD1 LINE L1 5821 5990 -252 522 122 22 0 chr10 31318020 31318101 -114271187 + L1MD2 LINE L1 6267 6358 -1 243 0 0 0 chr10 31318315 31318342 -114270946 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1803 158 20 3 chr10 31318345 31318637 -114270651 - AluJb SINE Alu -15 297 1 29 56 0 28 chr10 31319314 31319341 -114269947 + AT_rich Low_complexity Low_complexity 1 27 -43 2654 148 53 93 chr10 31319341 31319610 -114269678 - MER7C DNA MER2_type -2430 598 320 2297 88 3 31 chr10 31319610 31319928 -114269360 + AluSp SINE Alu 1 309 -4 2654 148 53 93 chr10 31319928 31320281 -114269007 - MER7C DNA MER2_type -2708 320 1 29 56 0 28 chr10 31320281 31320325 -114268963 + AT_rich Low_complexity Low_complexity 27 70 0 545 255 43 64 chr10 31320430 31320618 -114268670 + MER5A DNA MER1_type 3 186 -3 1265 227 89 11 chr10 31320656 31320829 -114268459 + MLT1B LTR MaLR 2 160 -230 207 0 0 0 chr10 31320829 31320852 -114268436 + (TC)n Simple_repeat Simple_repeat 2 24 0 1265 227 89 11 chr10 31320852 31321039 -114268249 + MLT1B LTR MaLR 160 390 0 2247 112 3 0 chr10 31321081 31321386 -114267902 + AluSc SINE Alu 1 306 -3 367 293 75 55 chr10 31321510 31321977 -114267311 + L2 LINE L2 2749 3237 -76 839 226 20 20 chr10 31322563 31322758 -114266530 - MER63A DNA MER1_type -15 195 1 1187 188 52 111 chr10 31322982 31323315 -114265973 - MLT1A1 LTR MaLR 0 365 57 1989 152 0 16 chr10 31323315 31323631 -114265657 - AluJo SINE Alu -1 311 1 1187 188 52 111 chr10 31323631 31323685 -114265603 - MLT1A1 LTR MaLR -308 57 1 1033 154 0 0 chr10 31324160 31324322 -114264966 - AluJb SINE Alu -3 309 148 2354 84 0 0 chr10 31324556 31324853 -114264435 + AluY SINE Alu 1 297 -14 367 113 0 0 chr10 31324908 31324961 -114264327 - Alu SINE Alu -7 295 243 4315 21 0 0 chr10 31325075 31325561 -114263727 + L1PA3 LINE L1 5666 6151 -4 297 269 8 30 chr10 31325815 31325949 -114263339 + L1ME LINE L1 5727 5857 -264 25 23 0 23 chr10 31326000 31326021 -114263267 + AT_rich Low_complexity Low_complexity 1 21 -21 2269 91 0 7 chr10 31326021 31326308 -114262980 + AluSq SINE Alu 1 285 -28 25 23 0 23 chr10 31326308 31326329 -114262959 + AT_rich Low_complexity Low_complexity 21 42 0 383 225 28 0 chr10 31326342 31326413 -114262875 - Tigger3(Golem) DNA MER2_type 0 3029 2957 1466 164 8 131 chr10 31326510 31326907 -114262381 - MER7A DNA MER2_type 0 346 1 2223 85 3 3 chr10 31327019 31327487 -114261801 + AluSg SINE Alu 7 474 0 1216 22 11 27 chr10 31327304 31327566 -114261722 + (TAAAA)n Simple_repeat Simple_repeat 1 259 0 1221 168 9 40 chr10 31328788 31329014 -114260274 + AluJo SINE Alu 44 262 -50 180 0 0 0 chr10 31329032 31329052 -114260236 + (TAAAA)n Simple_repeat Simple_repeat 3 22 0 517 289 52 28 chr10 31329052 31329301 -114259987 - L3 LINE CR1 -16 1561 1307 4409 134 65 7 chr10 31329524 31330250 -114259038 + L1PA16 LINE L1 5397 6164 -2 3533 70 16 0 chr10 31330820 31331266 -114258022 + MLT2A2 LTR ERVL 1 453 0 228 292 14 0 chr10 31331675 31331747 -114257541 + L2 LINE L2 3241 3313 0 2198 112 7 0 chr10 31333706 31334001 -114255287 + AluSx SINE Alu 1 297 -15 657 202 61 10 chr10 31335261 31335449 -114253839 + L1M4 LINE L1 5625 5822 -299 2204 110 0 19 chr10 31335649 31335958 -114253330 + AluSx SINE Alu 1 303 -9 1093 226 137 30 chr10 31336436 31336827 -114252461 - MER69 DNA AcHobo -8 2518 2074 2422 94 0 0 chr10 31336827 31337124 -114252164 + AluSq SINE Alu 1 297 -16 1093 226 137 30 chr10 31337124 31337169 -114252119 - MER69 DNA AcHobo -452 2074 2035 1770 271 41 36 chr10 31337175 31337473 -114251815 - MER69 DNA AcHobo -620 606 311 2417 86 3 0 chr10 31337473 31337797 -114251491 + AluSp SINE Alu 1 325 0 1770 271 41 36 chr10 31337797 31337999 -114251289 - MER69 DNA AcHobo -915 311 112 1886 153 7 0 chr10 31337999 31338286 -114251002 + AluJo SINE Alu 1 289 -23 405 0 0 0 chr10 31338288 31338333 -114250955 + (TG)n Simple_repeat Simple_repeat 2 46 0 1770 271 41 36 chr10 31338333 31338411 -114250877 - MER69 DNA AcHobo -1114 112 18 466 260 78 13 chr10 31338484 31338638 -114250650 + L2 LINE L2 3150 3313 0 272 260 19 67 chr10 31339335 31339439 -114249849 - MIR SINE MIR -46 162 64 1759 164 24 7 chr10 31339633 31339920 -114249368 + AluJb SINE Alu 3 294 -18 357 202 227 0 chr10 31340440 31340559 -114248729 + MIR SINE MIR 51 196 -66 1817 166 36 0 chr10 31340667 31340968 -114248320 - AluJb SINE Alu 0 312 1 1349 225 70 51 chr10 31341322 31341400 -114247888 + MER63 DNA MER1_type 682 757 -304 1728 177 3 20 chr10 31341400 31341699 -114247589 + AluJo SINE Alu 1 294 -18 1349 225 70 51 chr10 31341699 31341993 -114247295 + MER63 DNA MER1_type 757 1061 0 385 189 20 133 chr10 31342000 31342083 -114247205 - L2 LINE L2 -695 2619 2528 342 0 0 0 chr10 31342083 31342121 -114247167 + (TG)n Simple_repeat Simple_repeat 1 38 0 2246 110 0 0 chr10 31342130 31342422 -114246866 - AluSx SINE Alu -20 292 1 385 189 20 133 chr10 31342422 31342524 -114246764 - L2 LINE L2 -794 2520 2446 298 246 9 9 chr10 31342805 31342915 -114246373 + GA-rich Low_complexity Low_complexity 2 111 0 2200 107 0 22 chr10 31343089 31343408 -114245880 + AluSx SINE Alu 1 312 0 802 167 8 0 chr10 31343695 31343827 -114245461 + FLAM_A SINE Alu 1 133 0 290 284 153 59 chr10 31345401 31345521 -114243767 - MIR SINE MIR -16 246 139 2229 92 3 0 chr10 31345521 31345840 -114243448 + AluSp SINE Alu 1 320 0 290 284 153 59 chr10 31345840 31345940 -114243348 - MIR SINE MIR -123 139 4 323 262 48 19 chr10 31346219 31346322 -114242966 - L2 LINE L2 0 3313 3208 603 228 62 12 chr10 31346881 31347043 -114242245 + MLT1D LTR MaLR 7 176 -329 2107 112 4 0 chr10 31347046 31347323 -114241965 + AluSp SINE Alu 1 278 -35 641 221 15 25 chr10 31347404 31347592 -114241696 + MLT1D LTR MaLR 224 505 0 662 233 0 0 chr10 31347809 31347938 -114241350 - FLAM_A SINE Alu -1 132 4 2244 117 0 0 chr10 31351449 31351740 -114237548 + AluSx SINE Alu 1 291 -21 294 271 78 42 chr10 31351940 31352132 -114237156 + L1MEd LINE L1 1062 1260 -4945 276 345 35 9 chr10 31352359 31352475 -114236813 + L1MEd LINE L1 1540 1658 -4738 3983 99 9 7 chr10 31352588 31353164 -114236124 - L1PA13 LINE L1 0 6163 5587 215 265 0 0 chr10 31353314 31353363 -114235925 + A-rich Low_complexity Low_complexity 1 49 0 4043 146 12 17 chr10 31355558 31355831 -114233457 + L1PA15 LINE L1 5513 5786 -379 2381 81 0 10 chr10 31355831 31356129 -114233159 + AluY SINE Alu 1 295 -16 4043 146 12 17 chr10 31356129 31356511 -114232777 + L1PA15 LINE L1 5786 6165 0 1833 167 3 10 chr10 31357080 31357391 -114231897 + AluJo SINE Alu 1 309 -3 240 279 97 11 chr10 31358846 31358950 -114230338 + MIR SINE MIR 37 136 -72 186 43 0 0 chr10 31358961 31358984 -114230304 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 396 269 141 6 chr10 31359314 31359470 -114229818 - MIR3 SINE MIR -13 195 19 240 220 0 0 chr10 31360288 31360338 -114228950 - MLT1K LTR MaLR -15 573 524 2202 120 0 0 chr10 31360698 31360989 -114228299 + AluSc SINE Alu 1 291 -18 549 310 0 0 chr10 31361543 31361717 -114227571 + MER5B DNA MER1_type 1 174 -4 2065 118 66 41 chr10 31361717 31362083 -114227205 + THE1C LTR MaLR 1 375 0 211 230 34 142 chr10 31362105 31362253 -114227035 + MER5B DNA MER1_type 17 148 -30 195 274 55 50 chr10 31362242 31362330 -114226958 - MER5A DNA MER1_type -54 135 39 * 260 244 0 56 chr10 31362409 31362499 -114226789 + MER5A DNA MER1_type 25 109 -80 375 267 22 37 chr10 31362533 31362646 -114226642 - MER5B DNA MER1_type -2 176 64 2283 106 0 13 chr10 31362646 31362948 -114226340 - AluSx SINE Alu -14 298 1 375 267 22 37 chr10 31362948 31362969 -114226319 - MER5B DNA MER1_type -114 64 44 192 263 0 0 chr10 31363532 31363570 -114225718 + L2 LINE L2 3217 3254 -18 1648 167 3 21 chr10 31363738 31363883 -114225405 - AluJo SINE Alu -30 282 136 207 0 0 0 chr10 31363883 31363906 -114225382 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 1938 137 4 7 chr10 31363908 31364185 -114225103 - AluSx SINE Alu -36 276 1 1648 167 3 21 chr10 31364185 31364323 -114224965 - AluJo SINE Alu -177 135 1 201 39 0 0 chr10 31365240 31365266 -114224022 + (A)n Simple_repeat Simple_repeat 1 26 0 21 36 0 0 chr10 31365476 31365504 -114223784 + AT_rich Low_complexity Low_complexity 1 28 0 1910 125 3 34 chr10 31365723 31366019 -114223269 + AluJb SINE Alu 22 308 -4 2624 171 42 9 chr10 31366367 31366817 -114222471 - MER70A LTR ERVL -7 465 1 2278 150 5 19 chr10 31367515 31367882 -114221406 - THE1B LTR MaLR 0 364 3 1934 204 25 6 chr10 31368399 31368757 -114220531 - MLT1A1 LTR MaLR 0 365 1 534 295 61 13 chr10 31368905 31369212 -114220076 - L1ME LINE L1 -419 5751 5419 523 287 46 71 chr10 31369256 31369622 -114219666 - L1ME LINE L1 -813 5333 4977 180 0 0 0 chr10 31369643 31369663 -114219625 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 265 253 27 93 chr10 31369697 31369905 -114219383 - L1ME LINE L1 -1537 4609 4420 1951 148 13 20 chr10 31369905 31370208 -114219080 - AluJb SINE Alu -11 301 1 265 253 27 93 chr10 31370208 31370256 -114219032 - L1ME LINE L1 -1726 4420 4370 1980 185 21 3 chr10 31370444 31370774 -114218514 + MER1B DNA MER1_type 2 337 0 312 384 9 22 chr10 31370817 31370844 -114218444 - L1ME LINE L1 -1975 4171 4145 218 32 32 0 chr10 31370844 31370875 -114218413 + (TG)n Simple_repeat Simple_repeat 1 32 0 312 384 9 22 chr10 31370875 31371071 -114218217 - L1ME LINE L1 -2001 4145 3951 2397 75 0 13 chr10 31371139 31371447 -114217841 + AluSx SINE Alu 1 304 -8 6684 133 37 8 chr10 31371495 31373032 -114216256 - L1MA6 LINE L1 -5 6295 4706 4933 98 9 2 chr10 31373169 31373814 -114215474 - L1PA11 LINE L1 -2 6172 5523 21 0 0 0 chr10 31373879 31373900 -114215388 + AT_rich Low_complexity Low_complexity 1 21 0 2305 85 10 13 chr10 31374059 31374364 -114214924 - AluY SINE Alu -7 304 1 337 304 102 54 chr10 31374364 31375118 -114214170 - L1ME LINE L1 -2838 3308 2519 210 91 0 0 chr10 31376244 31376277 -114213011 + (CA)n Simple_repeat Simple_repeat 2 34 0 2107 99 3 7 chr10 31376912 31377194 -114212094 - AluSp SINE Alu -32 281 1 2233 108 0 0 chr10 31377194 31377490 -114211798 - AluSg1 SINE Alu -13 296 1 2790 50 3 0 chr10 31378032 31378355 -114210933 - L1PA13 LINE L1 -18 6145 5822 1728 121 0 0 chr10 31378356 31378587 -114210701 - AluSg/x SINE Alu -10 300 70 331 215 0 25 chr10 31379153 31379232 -114210056 + L2 LINE L2 3163 3239 -74 344 327 71 15 chr10 31379930 31380196 -114209092 + LTR33 LTR ERVL 241 521 0 966 261 24 10 chr10 31380196 31380487 -114208801 - HAL1 LINE L1 -835 1672 1378 412 247 0 0 chr10 31380496 31380569 -114208719 - Tigger7 DNA MER2_type -11 2476 2404 1414 232 0 4 chr10 31380595 31380849 -114208439 - Tigger7 DNA MER2_type -2234 253 1 2673 261 95 51 chr10 31380867 31381885 -114207403 - HAL1 LINE L1 -1165 1342 370 189 0 0 0 chr10 31381885 31381906 -114207382 + (TTG)n Simple_repeat Simple_repeat 1 21 0 2673 261 95 51 chr10 31381906 31382126 -114207162 - HAL1 LINE L1 -2137 370 44 2203 230 68 30 chr10 31382126 31382726 -114206562 - MLT1E2 LTR MaLR -1 625 3 2673 261 95 51 chr10 31382726 31382770 -114206518 - HAL1 LINE L1 -2463 44 3 529 325 45 29 chr10 31382802 31383110 -114206178 + L3 LINE CR1 1136 1448 -129 1508 180 71 19 chr10 31383193 31383515 -114205773 + MER44D DNA MER2_type 1 609 0 644 198 33 0 chr10 31383616 31383737 -114205551 - L2 LINE L2 -1 3312 3188 2280 118 0 0 chr10 31384250 31384556 -114204732 - AluSx SINE Alu -2 310 5 603 254 40 23 chr10 31385102 31385275 -114204013 + MIR SINE MIR 86 261 -1 213 328 123 0 chr10 31385476 31385598 -114203690 + MIR SINE MIR 69 205 -57 4456 203 94 46 chr10 31386799 31388063 -114201225 - L1M4 LINE L1 -1218 4928 3604 233 139 26 43 chr10 31388217 31388293 -114200995 + CT-rich Low_complexity Low_complexity 1 74 0 22 35 0 0 chr10 31388980 31389009 -114200279 + AT_rich Low_complexity Low_complexity 1 29 0 527 284 105 36 chr10 31389233 31389680 -114199608 - HAL1 LINE L1 -947 1560 1083 597 282 167 8 chr10 31389688 31389940 -114199348 - L2 LINE L2 -7 3306 3015 4155 88 2 33 chr10 31390579 31391149 -114198139 + L1PB1 LINE L1 5597 6148 -3 691 285 120 37 chr10 31391420 31391795 -114197493 - MLT1J2 LTR MaLR -44 406 1 383 300 106 12 chr10 31392771 31392941 -114196347 + MIR SINE MIR 67 252 -10 205 377 23 31 chr10 31393692 31393822 -114195466 + MIR3 SINE MIR 3 131 -77 239 158 0 0 chr10 31394037 31394075 -114195213 + L1P2 LINE L1 5713 5750 -404 1546 191 0 4 chr10 31394109 31394365 -114194923 - AluJo SINE Alu -56 256 2 651 283 75 42 chr10 31395174 31395482 -114193806 + L1MD2 LINE L1 22 339 -6201 2046 225 96 67 chr10 31395612 31396581 -114192707 + L1MD2 LINE L1 876 1870 -4670 * 7478 234 46 33 chr10 31396569 31398838 -114190450 + L1MD2 LINE L1 3292 5529 -1224 1905 92 56 39 chr10 31398838 31399143 -114190145 + AluY SINE Alu 1 310 -1 7478 234 46 33 chr10 31399143 31400075 -114189213 + L1MD2 LINE L1 5529 6538 -215 237 65 0 0 chr10 31400075 31400106 -114189182 + (CA)n Simple_repeat Simple_repeat 2 32 0 7478 234 46 33 chr10 31400106 31400315 -114188973 + L1MD2 LINE L1 6538 6743 -10 1502 189 4 0 chr10 31400335 31400600 -114188688 + AluJo SINE Alu 36 301 -11 317 313 134 30 chr10 31403037 31403171 -114186117 + MER5B DNA MER1_type 30 177 -1 312 275 11 33 chr10 31403504 31403595 -114185693 - MIR SINE MIR -3 259 171 2220 102 65 26 chr10 31403608 31404143 -114185145 - MER51A LTR ERV1 0 634 1 554 288 41 0 chr10 31404143 31404313 -114184975 - MIR SINE MIR -84 178 2 2174 107 3 13 chr10 31404977 31405276 -114184012 + AluSx SINE Alu 1 296 -16 307 158 0 0 chr10 31406932 31406989 -114182299 - L1MB2 LINE L1 0 6171 6115 1195 86 0 0 chr10 31406989 31407140 -114182148 - AluSg/x SINE Alu -39 273 123 1781 36 0 2 chr10 31407144 31407558 -114181730 - SVA Other Other -893 1386 268 2312 98 7 0 chr10 31407701 31407997 -114181291 - AluSx SINE Alu -14 298 1 241 317 211 12 chr10 31408183 31408344 -114180944 + MIR3 SINE MIR 16 208 0 496 258 163 38 chr10 31408378 31408618 -114180670 - L2 LINE L2 -2 3311 3042 210 280 93 51 chr10 31409287 31409320 -114179968 - L2 LINE L2 -3 3310 3280 2464 58 3 19 chr10 31409320 31409633 -114179655 + AluY SINE Alu 1 308 -3 210 280 93 51 chr10 31409633 31409717 -114179571 - L2 LINE L2 -33 3280 3188 1013 268 43 85 chr10 31409781 31409820 -114179468 - MLT1I LTR MaLR 0 409 370 2186 130 0 0 chr10 31409820 31410120 -114179168 - AluSx SINE Alu -12 300 1 1013 268 43 85 chr10 31410120 31410502 -114178786 - MLT1I LTR MaLR -39 370 6 8907 112 14 18 chr10 31411387 31411850 -114177438 + HSMAR2 DNA Mariner 3 467 -835 239 79 26 0 chr10 31411850 31411888 -114177400 + (CTAA)n Simple_repeat Simple_repeat 3 41 0 8907 112 14 18 chr10 31411888 31412730 -114176558 + HSMAR2 DNA Mariner 467 1302 0 442 267 46 0 chr10 31413193 31413324 -114175964 + MIR SINE MIR 123 259 -3 1526 174 56 7 chr10 31413345 31413615 -114175673 + AluJo SINE Alu 12 294 -18 212 319 39 77 chr10 31413775 31413982 -114175306 + L2 LINE L2 2557 2755 -559 2194 137 0 32 chr10 31414127 31414471 -114174817 + MER1B DNA MER1_type 7 339 0 658 262 15 50 chr10 31414535 31414764 -114174524 - MLT1L LTR MaLR -2 609 295 646 250 23 23 chr10 31414809 31414981 -114174307 - MIR SINE MIR -88 174 3 252 307 13 0 chr10 31415245 31415320 -114173968 + (TATG)n Simple_repeat Simple_repeat 1 76 0 2207 95 3 46 chr10 31415685 31416011 -114173277 - AluSx SINE Alu 0 312 1 284 130 0 37 chr10 31416021 31416075 -114173213 - LTR29 LTR ERV1 -67 555 471 1827 122 91 0 chr10 31417532 31417818 -114171470 + AluSx SINE Alu 1 312 0 421 278 19 0 chr10 31417855 31417963 -114171325 + MER117 DNA MER1_type 11 120 -77 856 158 0 15 chr10 31418008 31418141 -114171147 - FLAM_C SINE Alu 0 133 3 413 250 0 11 chr10 31418242 31418330 -114170958 + MIR SINE MIR 36 122 -140 2203 237 140 9 chr10 31418954 31419645 -114169643 + LTR50 LTR ERVL 5 786 -9 2394 79 7 0 chr10 31419865 31420169 -114169119 + AluSp SINE Alu 1 306 -7 1046 97 0 0 chr10 31420762 31420896 -114168392 + AluSq/x SINE Alu 1 134 -179 484 256 29 74 chr10 31421398 31421597 -114167691 - MIR SINE MIR -28 234 46 3475 126 23 2 chr10 31421597 31422113 -114167175 + MER1A DNA MER1_type 1 527 0 484 256 29 74 chr10 31422113 31422155 -114167133 - MIR SINE MIR -216 46 4 406 200 120 10 chr10 31422500 31422600 -114166688 - L2 LINE L2 -3 3310 3200 269 277 48 54 chr10 31422981 31423147 -114166141 + L1ME LINE L1 5588 5752 -369 662 277 63 26 chr10 31423243 31423590 -114165698 + L1ME3A LINE L1 4907 5266 -880 591 259 155 20 chr10 31423599 31423896 -114165392 + L1ME3A LINE L1 5290 5626 -538 1324 244 94 30 chr10 31423973 31424407 -114164881 + MLT1C LTR MaLR 6 467 0 504 273 7 0 chr10 31424413 31424556 -114164732 + L1ME3A LINE L1 5711 5854 -316 2010 110 29 18 chr10 31424654 31424975 -114164313 - AluSx SINE Alu 0 324 1 1601 180 10 35 chr10 31426213 31426502 -114162786 + AluJo SINE Alu 1 282 -30 27 87 0 0 chr10 31426508 31426577 -114162711 + AT_rich Low_complexity Low_complexity 1 69 0 192 303 115 8 chr10 31426862 31426984 -114162304 + MIR SINE MIR 57 191 -71 401 190 0 13 chr10 31427522 31427601 -114161687 + MER116 DNA Mariner 1 78 -2 195 69 0 0 chr10 31428292 31428321 -114160967 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 1771 160 11 0 chr10 31428324 31428592 -114160696 - AluJo SINE Alu -31 281 11 1693 148 10 40 chr10 31428946 31429249 -114160039 - AluJo SINE Alu -18 294 1 2101 115 0 11 chr10 31430018 31430374 -114158914 - AluSq SINE Alu 0 355 3 216 158 0 0 chr10 31430537 31430575 -114158713 + (CA)n Simple_repeat Simple_repeat 2 39 0 864 274 35 25 chr10 31430902 31431216 -114158072 - MARNA DNA Mariner -129 457 141 1368 214 10 17 chr10 31433170 31433459 -114155829 + AluJo SINE Alu 1 287 -25 2185 138 16 24 chr10 31433550 31433927 -114155361 - THE1C LTR MaLR -1 374 1 1835 157 0 38 chr10 31434294 31434607 -114154681 + AluJb SINE Alu 1 301 -11 1921 162 0 10 chr10 31434904 31435218 -114154070 + AluJb SINE Alu 1 311 -1 180 0 0 0 chr10 31438155 31438175 -114151113 + (TG)n Simple_repeat Simple_repeat 1 20 0 24 53 0 0 chr10 31438940 31438978 -114150310 + AT_rich Low_complexity Low_complexity 1 38 0 803 159 0 0 chr10 31439547 31439673 -114149615 - FLAM_C SINE Alu -6 127 2 711 162 3 0 chr10 31439734 31440075 -114149213 + (TA)n Simple_repeat Simple_repeat 1 342 0 927 99 0 0 chr10 31440108 31440249 -114149039 + (TA)n Simple_repeat Simple_repeat 2 142 0 1629 265 140 8 chr10 31440432 31440945 -114148343 - MLT1G LTR MaLR 0 590 10 1164 246 79 3 chr10 31441182 31441512 -114147776 - MLT2B1 LTR ERVL -165 355 1 263 258 45 0 chr10 31441554 31441643 -114147645 - L2 LINE L2 -1 3312 3220 2374 82 0 3 chr10 31442080 31442373 -114146915 - AluY SINE Alu -19 292 1 6822 119 155 87 chr10 31444677 31446268 -114143020 + pTR5 LTR ERV1 741 2438 0 1699 116 4 0 chr10 31446335 31446568 -114142720 + AluSq SINE Alu 34 267 -46 398 210 12 12 chr10 31446666 31446747 -114142541 + MLT1J2 LTR MaLR 22 102 -348 1397 146 203 8 chr10 31447168 31447429 -114141859 + AluJb SINE Alu 1 312 0 921 175 0 85 chr10 31448020 31448130 -114141158 + MER3 DNA MER1_type 16 134 -75 225 0 0 0 chr10 31448130 31448155 -114141133 + (TG)n Simple_repeat Simple_repeat 2 26 0 224 30 30 0 chr10 31448154 31448187 -114141101 + (TA)n Simple_repeat Simple_repeat 1 34 0 * 921 175 0 85 chr10 31448155 31448196 -114141092 + MER3 DNA MER1_type 134 113 -96 1945 113 4 4 chr10 31448196 31448461 -114140827 - AluSq SINE Alu -48 265 1 921 175 0 85 chr10 31448461 31448551 -114140737 + MER3 DNA MER1_type 112 208 -1 789 224 0 42 chr10 31448561 31448753 -114140535 - MER58B DNA MER1_type -1 340 157 1859 172 0 10 chr10 31449792 31450095 -114139193 + AluJo SINE Alu 1 300 -12 2134 99 0 14 chr10 31450117 31450399 -114138889 + AluSx SINE Alu 26 303 -9 1968 143 55 25 chr10 31451782 31452146 -114137142 + THE1C LTR MaLR 1 375 0 1283 201 4 35 chr10 31452806 31452947 -114136341 + AluJo SINE Alu 1 132 -180 213 39 0 0 chr10 31452947 31452973 -114136315 + (TA)n Simple_repeat Simple_repeat 2 27 0 1283 201 4 35 chr10 31452973 31453090 -114136198 + AluJo SINE Alu 132 251 -61 25 31 0 0 chr10 31453104 31453136 -114136152 + AT_rich Low_complexity Low_complexity 1 32 0 268 214 11 0 chr10 31453136 31453314 -114135974 + (TA)n Simple_repeat Simple_repeat 1 180 0 292 286 6 11 chr10 31453402 31453577 -114135711 + (TA)n Simple_repeat Simple_repeat 1 174 0 432 0 0 0 chr10 31453601 31453649 -114135639 + (TG)n Simple_repeat Simple_repeat 2 49 0 2121 120 0 3 chr10 31453964 31454270 -114135018 - AluY SINE Alu 0 305 1 271 276 17 17 chr10 31454391 31454507 -114134781 + L1ME3 LINE L1 5757 5872 -1936 531 308 60 0 chr10 31454758 31454943 -114134345 + MIR SINE MIR 5 200 -62 2322 100 0 13 chr10 31454992 31455303 -114133985 + AluSg SINE Alu 4 310 0 1019 170 6 22 chr10 31455712 31455894 -114133394 - FRAM SINE Alu 0 176 1 2106 90 32 7 chr10 31456419 31456726 -114132562 - AluSx SINE Alu 0 314 1 1974 133 7 14 chr10 31456809 31457103 -114132185 + AluJo SINE Alu 1 292 -20 289 321 110 23 chr10 31458356 31458574 -114130714 - MIR SINE MIR -6 256 20 1049 125 0 0 chr10 31459492 31459628 -114129660 - AluSg/x SINE Alu -65 247 112 884 282 74 57 chr10 31460018 31460863 -114128425 - L1M4 LINE L1 -2279 3867 3003 1522 114 50 5 chr10 31460863 31461083 -114128205 + MER30 DNA MER1_type 1 230 0 884 282 74 57 chr10 31461083 31461188 -114128100 - L1M4 LINE L1 -3143 3003 2901 201 163 0 23 chr10 31463499 31463542 -114125746 + L2 LINE L2 3230 3271 -1 2366 97 7 0 chr10 31464325 31464633 -114124655 - AluSq SINE Alu -3 310 1 292 272 10 10 chr10 31464838 31464941 -114124347 + L1ME3 LINE L1 6056 6158 -4 23 54 0 0 chr10 31465713 31465750 -114123538 + AT_rich Low_complexity Low_complexity 1 37 0 275 0 29 0 chr10 31466589 31466624 -114122664 + (TTTTG)n Simple_repeat Simple_repeat 1 36 0 2066 113 0 0 chr10 31466624 31466898 -114122390 - AluSx SINE Alu -33 279 6 207 0 0 0 chr10 31466963 31466986 -114122302 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 718 141 0 0 chr10 31467530 31467629 -114121659 + 5S rRNA rRNA 22 120 -1 403 177 0 149 chr10 31467630 31467645 -114121643 + FLAM_A SINE Alu 1 17 -285 2533 128 3 8 chr10 31467645 31468011 -114121277 + THE1B LTR MaLR 1 364 0 403 177 0 149 chr10 31468011 31468136 -114121152 + FLAM_A SINE Alu 17 120 -182 186 189 0 0 chr10 31468616 31468653 -114120635 + (TATATG)n Simple_repeat Simple_repeat 2 38 0 1647 181 31 10 chr10 31469323 31469616 -114119672 - AluJo SINE Alu -13 299 1 249 207 6 6 chr10 31469577 31469638 -114119650 - AluJ/monomer SINE Alu -262 38 1 462 248 207 15 chr10 31470736 31470934 -114118354 - MER102a DNA MER1_type -31 299 64 2298 79 34 0 chr10 31470934 31471226 -114118062 + AluSq SINE Alu 1 302 -11 690 219 133 91 chr10 31472071 31472524 -114116764 - MLT1L LTR MaLR -1 614 143 1584 192 10 19 chr10 31472586 31472899 -114116389 + AluJo SINE Alu 1 310 -2 332 325 31 0 chr10 31472910 31473073 -114116215 + L2 LINE L2 1684 1851 -1463 824 211 0 12 chr10 31473073 31473239 -114116049 + FRAM SINE Alu 1 164 -12 457 311 57 0 chr10 31473244 31473421 -114115867 + L2 LINE L2 1841 2027 -1287 185 260 280 20 chr10 31473489 31473639 -114115649 + L2 LINE L2 2137 2325 -989 1675 157 6 44 chr10 31473909 31474227 -114115061 + AluJo SINE Alu 1 306 -6 2437 93 3 0 chr10 31474317 31474627 -114114661 - AluY SINE Alu 0 311 1 1701 185 3 7 chr10 31476759 31477051 -114112237 + AluJb SINE Alu 6 296 -16 1973 141 0 4 chr10 31477439 31477715 -114111573 + AluSx SINE Alu 1 275 -37 378 0 0 0 chr10 31477717 31477759 -114111529 + (TA)n Simple_repeat Simple_repeat 2 43 0 242 300 0 0 chr10 31477899 31477959 -114111329 - MER81 DNA DNA -50 64 5 227 114 23 0 chr10 31478192 31478236 -114111052 + GA-rich Low_complexity Low_complexity 3 47 0 527 173 9 0 chr10 31478370 31478480 -114110808 + (CA)n Simple_repeat Simple_repeat 2 112 0 266 115 0 39 chr10 31478481 31478533 -114110755 - MER4-int LTR ERV1 -5436 1162 1113 192 158 0 0 chr10 31478534 31478572 -114110716 + (CA)n Simple_repeat Simple_repeat 1 38 0 303 226 0 24 chr10 31478573 31478632 -114110656 - L1MC4 LINE L1 -1339 6703 6645 1705 169 3 34 chr10 31478632 31478928 -114110360 + AluJb SINE Alu 1 287 -25 303 226 0 24 chr10 31478928 31478952 -114110336 - L1MC4 LINE L1 -1397 6645 6622 420 257 18 0 chr10 31479105 31479214 -114110074 + MER81 DNA DNA 4 114 0 2258 172 12 34 chr10 31479814 31480232 -114109056 + Tigger2a DNA MER2_type 26 434 0 210 118 0 0 chr10 31481620 31481654 -114107634 + (TG)n Simple_repeat Simple_repeat 2 35 0 1465 202 0 24 chr10 31482387 31482674 -114106614 + AluJo SINE Alu 1 280 -32 351 119 0 0 chr10 31533220 31533287 -114056001 + (TATG)n Simple_repeat Simple_repeat 2 68 0 710 246 87 5 chr10 31533926 31534133 -114055155 + MIR SINE MIR 5 228 -34 929 70 86 0 chr10 31534137 31534265 -114055023 + MER85 DNA T2_type 1 139 0 764 183 0 30 chr10 31534417 31534548 -114054740 + FLAM_C SINE Alu 3 129 -14 200 169 0 17 chr10 31534552 31534611 -114054677 + (TA)n Simple_repeat Simple_repeat 1 58 0 294 258 149 46 chr10 31534659 31534853 -114054435 - MIR SINE MIR 0 262 49 2613 47 0 0 chr10 31535697 31535996 -114053292 + AluY SINE Alu 1 299 -12 2083 112 21 0 chr10 31536906 31537192 -114052096 - AluSx SINE Alu -8 304 13 769 214 14 0 chr10 31537410 31537555 -114051733 - Tigger3(Golem) DNA MER2_type -2 3027 2881 2211 93 3 7 chr10 31537589 31537891 -114051397 - AluY SINE Alu -7 304 4 236 279 156 39 chr10 31538036 31538190 -114051098 + MER3 DNA MER1_type 2 126 -83 247 204 0 19 chr10 31538403 31538457 -114050831 + (CA)n Simple_repeat Simple_repeat 1 53 0 206 121 0 0 chr10 31541067 31541100 -114048188 + (TTTTTG)n Simple_repeat Simple_repeat 4 36 0 323 282 77 51 chr10 31541893 31542049 -114047239 + MER20B DNA MER1_type 5 164 -619 2312 95 0 16 chr10 31542188 31542493 -114046795 - AluSg SINE Alu -9 301 2 2280 122 0 3 chr10 31542922 31543233 -114046055 - AluSx SINE Alu -1 311 2 2290 106 0 0 chr10 31543646 31543947 -114045341 - AluSg SINE Alu -9 301 1 1107 83 0 0 chr10 31543947 31544080 -114045208 - AluSg SINE Alu -177 133 1 188 240 20 40 chr10 31545399 31545449 -114043839 - MIR SINE MIR -201 61 13 276 218 115 0 chr10 31545509 31545596 -114043692 - MER5A DNA MER1_type -84 105 9 1671 183 0 7 chr10 31547019 31547314 -114041974 + AluJo SINE Alu 5 297 -15 1337 218 200 43 chr10 31547787 31548248 -114041040 + MER50 LTR ERV1 10 592 -142 2019 93 72 0 chr10 31548248 31548526 -114040762 - AluSx SINE Alu -14 298 1 1337 218 200 43 chr10 31548526 31548674 -114040614 + MER50 LTR ERV1 592 715 -19 2329 155 96 26 chr10 31548732 31549230 -114040058 + L1MB3 LINE L1 5651 6183 0 2206 110 0 19 chr10 31550235 31550543 -114038745 - AluSx SINE Alu -10 302 1 920 204 6 12 chr10 31550859 31551031 -114038257 - FRAM SINE Alu -6 170 1 407 245 37 31 chr10 31551156 31551319 -114037969 + MER5B DNA MER1_type 2 165 -13 238 310 100 0 chr10 31552455 31552555 -114036733 + MIR SINE MIR 3 112 -150 22 0 0 0 chr10 31553498 31553520 -114035768 + AT_rich Low_complexity Low_complexity 1 22 0 2359 95 0 0 chr10 31553530 31553824 -114035464 + AluSq SINE Alu 1 294 -19 344 207 299 0 chr10 31554870 31554957 -114034331 + MER44D DNA MER2_type 1 383 -226 1763 140 0 73 chr10 31555036 31555350 -114033938 - AluSx SINE Alu -21 291 1 186 133 0 0 chr10 31555374 31555404 -114033884 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 1601 194 0 14 chr10 31555412 31555696 -114033592 - AluJo SINE Alu -32 280 1 764 116 20 62 chr10 31555696 31555842 -114033446 + MER44D DNA MER2_type 470 609 0 470 282 81 6 chr10 31555944 31556118 -114033170 - L1MC4a LINE L1 -1934 5874 5688 513 224 139 54 chr10 31556160 31556383 -114032905 - L1MC4a LINE L1 -2249 5559 5318 204 138 46 0 chr10 31556532 31556597 -114032691 + (TA)n Simple_repeat Simple_repeat 2 69 0 2115 123 7 0 chr10 31556736 31557036 -114032252 - AluSx SINE Alu -10 302 1 756 179 0 0 chr10 31557048 31557171 -114032117 - FLAM_C SINE Alu -19 124 2 506 283 23 40 chr10 31557174 31557527 -114031761 - L1MC5 LINE L1 -34 7927 7581 2182 133 0 0 chr10 31557581 31557882 -114031406 - AluSx SINE Alu -11 301 1 353 291 92 8 chr10 31557895 31558146 -114031142 - L1MC4a LINE L1 -1133 5013 4742 4869 185 139 103 chr10 31559140 31560834 -114028454 + MER52A LTR ERV1 1 1755 0 1732 138 112 4 chr10 31561277 31561545 -114027743 - AluSx SINE Alu -15 297 1 2230 109 10 3 chr10 31563720 31564022 -114025266 + AluSc SINE Alu 1 304 -5 206 276 66 0 chr10 31564068 31564144 -114025144 - MER5A DNA MER1_type -57 132 52 180 0 0 0 chr10 31564156 31564176 -114025112 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 1524 161 36 29 chr10 31564181 31564455 -114024833 - AluJo SINE Alu -36 276 1 471 357 23 23 chr10 31564755 31565021 -114024267 - HAL1 LINE L1 -1260 1247 982 2288 82 36 13 chr10 31565206 31565511 -114023777 - AluSq SINE Alu -1 312 1 2175 78 3 7 chr10 31565591 31565874 -114023414 - AluY SINE Alu -29 282 1 592 266 111 24 chr10 31565916 31566123 -114023165 + MIR SINE MIR 38 262 0 7144 90 18 2 chr10 31566350 31567792 -114021496 + L1PA8A LINE L1 4293 5756 -375 3754 90 2 10 chr10 31567845 31568366 -114020922 + L1PA10 LINE L1 5642 6158 -10 985 178 37 5 chr10 31568399 31568590 -114020698 - MLT1D LTR MaLR -308 197 1 639 147 0 0 chr10 31569318 31569413 -114019875 + FLAM_C SINE Alu 31 125 -18 1657 155 11 11 chr10 31569747 31570025 -114019263 + AluJo SINE Alu 1 278 -34 2451 82 0 3 chr10 31571651 31571957 -114017331 - AluSx SINE Alu -7 305 1 327 176 47 47 chr10 31572399 31572484 -114016804 - MLT1K LTR MaLR -39 549 465 2484 74 0 10 chr10 31573076 31573385 -114015903 + AluY SINE Alu 1 306 -5 2179 117 10 7 chr10 31574245 31574554 -114014734 + AluSx SINE Alu 1 310 -2 1072 146 6 0 chr10 31574559 31574717 -114014571 + FRAM SINE Alu 4 162 -14 208 0 62 0 chr10 31575168 31575200 -114014088 + (TTTTTA)n Simple_repeat Simple_repeat 2 35 0 6461 72 25 55 chr10 31576039 31577018 -114012270 - SVA Other Other -4 1382 433 5747 82 20 53 chr10 31577033 31577927 -114011361 - SVA Other Other -520 866 2 190 111 0 37 chr10 31577928 31577982 -114011306 + (GGGAGA)n Simple_repeat Simple_repeat 1 52 0 2269 106 7 0 chr10 31578124 31578425 -114010863 - AluSx SINE Alu -7 305 3 900 102 6 113 chr10 31578438 31578615 -114010673 - L1PB3 LINE L1 -1 6153 5996 1859 153 46 0 chr10 31579144 31579425 -114009863 + AluSx SINE Alu 1 294 -18 1283 142 52 78 chr10 31579478 31579746 -114009542 - AluJo SINE Alu -19 293 33 351 119 0 0 chr10 31579903 31579970 -114009318 + (TATG)n Simple_repeat Simple_repeat 2 68 0 710 246 87 5 chr10 31580609 31580816 -114008472 + MIR SINE MIR 5 228 -34 929 70 86 0 chr10 31580820 31580948 -114008340 + MER85 DNA T2_type 1 139 0 764 183 0 30 chr10 31581100 31581231 -114008057 + FLAM_C SINE Alu 3 129 -14 200 169 0 17 chr10 31581235 31581294 -114007994 + (TA)n Simple_repeat Simple_repeat 1 58 0 294 258 149 46 chr10 31581342 31581536 -114007752 - MIR SINE MIR 0 262 49 2651 40 0 0 chr10 31582380 31582678 -114006610 + AluY SINE Alu 1 298 -13 38 22 0 0 chr10 31583257 31583302 -114005986 + AT_rich Low_complexity Low_complexity 1 45 0 2324 98 0 3 chr10 31584307 31584612 -114004676 + AluSg SINE Alu 1 304 -6 437 259 136 7 chr10 31584621 31584768 -114004520 + MIR3 SINE MIR 37 202 -6 3666 115 72 36 chr10 31585982 31586197 -114003091 - LTR34 LTR ERV1 0 699 493 1675 151 70 7 chr10 31586197 31586481 -114002807 - AluSx SINE Alu -10 302 1 3666 115 72 36 chr10 31586481 31586927 -114002361 - LTR34 LTR ERV1 -206 493 14 370 256 78 23 chr10 31587855 31587984 -114001304 + L3 LINE CR1 1321 1456 -121 1102 113 40 17 chr10 31587989 31588166 -114001122 + MER4D LTR ERV1 1 181 -722 5352 124 12 10 chr10 31588166 31588972 -114000316 + L1PA15 LINE L1 5350 6157 -8 3355 142 65 73 chr10 31588972 31589668 -113999620 + MER4D LTR ERV1 183 872 0 3151 120 8 112 chr10 31590283 31590924 -113998364 + MER4B LTR ERV1 1 574 -36 479 237 0 52 chr10 31591362 31591497 -113997791 + L2 LINE L2 3180 3307 -6 200 182 0 0 chr10 31592404 31592437 -113996851 + CT-rich Low_complexity Low_complexity 2 34 0 393 22 0 0 chr10 31592440 31592486 -113996802 + (CA)n Simple_repeat Simple_repeat 2 47 0 2367 112 0 0 chr10 31592952 31593256 -113996032 - AluSx SINE Alu -8 304 1 181 296 57 23 chr10 31593495 31593583 -113995705 + L2 LINE L2 2954 3044 -228 1637 179 14 21 chr10 31593707 31593992 -113995296 - AluJo SINE Alu -29 283 1 391 169 48 0 chr10 31593997 31594080 -113995208 - L1PA16 LINE L1 -1 6165 6079 1052 156 0 11 chr10 31594170 31594349 -113994939 + AluJb SINE Alu 134 310 -2 206 31 0 31 chr10 31594661 31594693 -113994595 + (TTTG)n Simple_repeat Simple_repeat 4 34 0 2111 111 4 0 chr10 31594693 31594972 -113994316 - AluSx SINE Alu -32 280 1 3724 111 23 6 chr10 31595317 31595832 -113993456 + MER1A DNA MER1_type 4 527 0 1604 152 17 52 chr10 31596176 31596465 -113992823 + AluJo SINE Alu 2 280 -32 3422 105 8 10 chr10 31597587 31598081 -113991207 - LOR1a LTR ERV1 0 497 5 1375 225 37 34 chr10 31598379 31598677 -113990611 - AluJo SINE Alu -2 300 2 2043 185 50 46 chr10 31598772 31599275 -113990013 + MLT1D LTR MaLR 1 505 0 206 266 78 0 chr10 31599429 31599493 -113989795 + L2 LINE L2 3208 3276 -37 1733 170 17 17 chr10 31599558 31599847 -113989441 - AluJb SINE Alu -23 289 1 1785 121 83 78 chr10 31600091 31600290 -113988998 + THE1C LTR MaLR 1 204 -171 225 0 0 0 chr10 31600290 31600315 -113988973 + (TC)n Simple_repeat Simple_repeat 1 25 0 1785 121 83 78 chr10 31600315 31600488 -113988800 + THE1C LTR MaLR 204 375 0 2079 128 0 0 chr10 31600682 31600995 -113988293 + AluSx SINE Alu 1 313 0 244 360 84 27 chr10 31600997 31601258 -113988030 - L2 LINE L2 -20 3252 2977 209 280 20 0 chr10 31601258 31601308 -113987980 - L2 LINE L2 -12 3260 3210 22 0 0 0 chr10 31601316 31601338 -113987950 + AT_rich Low_complexity Low_complexity 1 22 0 694 169 8 0 chr10 31601393 31601511 -113987777 - AluJb SINE Alu -1 311 193 1042 245 32 0 chr10 31601566 31601782 -113987506 - MER58A DNA MER1_type -1 223 1 1834 178 3 3 chr10 31603755 31604059 -113985229 - AluJo SINE Alu -7 305 2 734 282 61 69 chr10 31604204 31604946 -113984342 + L2 LINE L2 2539 3283 -30 2277 115 0 0 chr10 31605119 31605414 -113983874 + AluSx SINE Alu 1 295 -17 380 127 0 0 chr10 31605638 31605693 -113983595 - Alu SINE Alu -6 296 242 2088 221 74 46 chr10 31605966 31606022 -113983266 - L1ME1 LINE L1 -5 6161 6108 1709 183 7 17 chr10 31606022 31606323 -113982965 - AluJo SINE Alu -14 298 1 2088 221 74 46 chr10 31606323 31606917 -113982371 - L1ME1 LINE L1 -58 6108 5493 662 62 0 0 chr10 31606919 31607000 -113982288 - THE1B LTR MaLR 0 364 284 474 54 0 0 chr10 31607000 31607056 -113982232 - THE1B LTR MaLR -308 56 1 1249 165 0 19 chr10 31607673 31607879 -113981409 + AluJb SINE Alu 1 202 -110 2291 85 3 0 chr10 31608066 31608379 -113980909 - AluY SINE Alu 0 314 1 1703 139 68 25 chr10 31608641 31608922 -113980366 - AluJo SINE Alu -6 306 14 243 229 0 0 chr10 31609155 31609216 -113980072 + (TATG)n Simple_repeat Simple_repeat 3 63 0 1791 102 124 0 chr10 31610241 31610506 -113978782 + AluSx SINE Alu 5 302 0 1935 144 0 7 chr10 31610780 31611064 -113978224 - AluJo SINE Alu -30 282 1 216 0 0 0 chr10 31611092 31611116 -113978172 + (TG)n Simple_repeat Simple_repeat 2 25 0 191 303 0 15 chr10 31611612 31611678 -113977610 - L2 LINE L2 -214 3058 2994 804 172 0 8 chr10 31611931 31612065 -113977223 + FLAM_C SINE Alu 1 133 0 2367 94 0 0 chr10 31612710 31613008 -113976280 - AluSc SINE Alu -11 298 1 1707 168 18 4 chr10 31613291 31613565 -113975723 - AluJb SINE Alu -34 278 1 1626 178 34 20 chr10 31613565 31613858 -113975430 - AluJo SINE Alu -15 297 1 1673 186 10 10 chr10 31615113 31615420 -113973868 - AluJb SINE Alu -5 307 1 183 143 29 0 chr10 31616371 31616406 -113972882 + MER5A DNA MER1_type 1 36 -153 215 269 104 0 chr10 31616606 31616673 -113972615 - L2 LINE L2 -1 3312 3239 521 278 44 28 chr10 31616751 31616931 -113972357 + MIR SINE MIR 6 188 -74 2401 156 44 29 chr10 31617011 31617465 -113971823 - LOR1b LTR ERV1 0 461 1 898 180 4 146 chr10 31617656 31617726 -113971562 + L1MB8 LINE L1 3909 3987 -2159 2025 114 40 3 chr10 31617726 31618024 -113971264 + AluSc SINE Alu 1 309 0 898 180 4 146 chr10 31618024 31618199 -113971089 + L1MB8 LINE L1 3987 4119 -2027 2815 178 34 38 chr10 31618199 31618222 -113971066 + MLT2B3 LTR ERVL 1 23 -531 2270 180 36 79 chr10 31618222 31618801 -113970487 + MLT2B3 LTR ERVL 1 554 0 2815 178 34 38 chr10 31618801 31619333 -113969955 + MLT2B3 LTR ERVL 23 554 0 4566 192 56 37 chr10 31619335 31620389 -113968899 + L1MB8 LINE L1 4117 5149 -1029 2193 134 132 5 chr10 31620389 31620769 -113968519 - MSTA LTR MaLR 0 428 1 786 139 23 8 chr10 31620769 31620898 -113968390 + FLAM_C SINE Alu 1 131 -2 4566 192 56 37 chr10 31620898 31621855 -113967433 + L1MB8 LINE L1 5148 6165 -13 255 31 0 0 chr10 31621860 31621892 -113967396 + (TG)n Simple_repeat Simple_repeat 2 33 0 568 284 209 48 chr10 31621918 31622249 -113967039 - L2 LINE L2 -799 2515 2239 315 0 0 0 chr10 31622249 31622284 -113967004 + (GA)n Simple_repeat Simple_repeat 2 36 0 568 284 209 48 chr10 31622284 31622597 -113966691 - L2 LINE L2 -1075 2239 1767 1085 195 108 16 chr10 31622968 31623222 -113966066 - AluJo SINE Alu -25 287 14 2172 172 34 3 chr10 31623754 31624138 -113965150 - MSTD LTR MaLR 0 396 1 1453 169 0 69 chr10 31624726 31625045 -113964243 - AluJo SINE Alu -15 297 1 183 42 0 0 chr10 31625760 31625784 -113963504 + (T)n Simple_repeat Simple_repeat 1 24 0 237 33 0 0 chr10 31626101 31626131 -113963157 + (CA)n Simple_repeat Simple_repeat 2 31 0 228 163 0 0 chr10 31626409 31626452 -113962836 + A-rich Low_complexity Low_complexity 1 43 0 466 217 104 26 chr10 31627623 31627738 -113961550 - L2 LINE L2 -2 3311 3188 2019 138 0 0 chr10 31628157 31628468 -113960820 - AluSx SINE Alu -1 311 1 694 175 0 0 chr10 31629054 31629174 -113960114 - AluSg/x SINE Alu 0 312 193 2014 135 0 7 chr10 31630769 31631073 -113958215 + AluSx SINE Alu 1 302 -10 1915 125 25 0 chr10 31631212 31631568 -113957720 - AluSx SINE Alu 0 363 1 1893 114 11 0 chr10 31632079 31632396 -113956892 - AluSq SINE Alu 0 320 1 777 138 31 15 chr10 31632429 31632559 -113956729 - FLAM_C SINE Alu -1 132 1 24 32 0 0 chr10 31632622 31632653 -113956635 + AT_rich Low_complexity Low_complexity 1 31 0 2121 111 10 0 chr10 31633918 31634215 -113955073 + AluSq SINE Alu 1 300 -13 2108 119 3 0 chr10 31634216 31634519 -113954769 + AluSc SINE Alu 1 304 -5 647 233 0 0 chr10 31634596 31634729 -113954559 + FLAM_A SINE Alu 6 138 -4 2108 100 0 13 chr10 31635205 31635505 -113953783 - AluSq SINE Alu -17 296 1 1388 204 74 9 chr10 31635505 31635821 -113953467 - L1MD1 LINE L1 -7 6235 5896 2147 135 28 38 chr10 31636194 31636232 -113953056 - L1MC1 LINE L1 -15 6318 6281 1855 173 0 0 chr10 31636232 31636538 -113952750 + AluJb SINE Alu 1 306 -6 2147 135 28 38 chr10 31636538 31636756 -113952532 - L1MC1 LINE L1 -52 6281 6065 1584 165 71 9 chr10 31636756 31637096 -113952192 - MER46B DNA MER2_type 0 236 1 2147 135 28 38 chr10 31637096 31637230 -113952058 - L1MC1 LINE L1 -268 6065 5931 2014 138 0 3 chr10 31638815 31639120 -113950168 - AluSx SINE Alu -8 304 1 443 195 195 0 chr10 31639956 31640079 -113949209 + L2 LINE L2 3167 3313 0 2185 80 3 3 chr10 31640912 31641201 -113948087 - AluSg1 SINE Alu -20 289 1 1022 188 92 98 chr10 31641993 31642460 -113946828 - MER4C LTR ERV1 0 465 2 2604 96 14 3 chr10 31644032 31644396 -113944892 - L1PA13 LINE L1 -2 6161 5794 471 114 0 0 chr10 31644714 31644793 -113944495 + L1MA5A LINE L1 6214 6292 -5 1349 184 25 22 chr10 31645602 31645726 -113943562 + AluJb SINE Alu 4 126 -186 1506 186 72 0 chr10 31645726 31646017 -113943271 + AluJb SINE Alu 1 312 0 1349 184 25 22 chr10 31646017 31646169 -113943119 + AluJb SINE Alu 126 281 -31 2253 174 22 26 chr10 31646381 31646840 -113942448 - LTR32 LTR ERVL 0 471 15 1948 131 0 7 chr10 31647488 31647785 -113941503 + AluJb SINE Alu 1 295 -17 1587 160 29 11 chr10 31648314 31648634 -113940654 - AluJo SINE Alu 0 327 3 2219 138 25 30 chr10 31648839 31649238 -113940050 - L1MB4 LINE L1 -2 6178 5782 1539 129 75 0 chr10 31650152 31650407 -113938881 + AluJb SINE Alu 11 284 -28 201 39 0 0 chr10 31650407 31650433 -113938855 + (CATA)n Simple_repeat Simple_repeat 2 27 0 1459 155 3 73 chr10 31650732 31651035 -113938253 - AluJo SINE Alu -22 290 9 2186 71 0 4 chr10 31651609 31651934 -113937354 - AluY SINE Alu 0 324 1 192 310 0 0 chr10 31652314 31652372 -113936916 - L2 LINE L2 0 3272 3215 497 213 86 75 chr10 31652612 31652786 -113936502 - MLT1C LTR MaLR -285 182 7 1954 128 3 0 chr10 31652842 31653132 -113936156 - AluSx SINE Alu -21 291 1 1488 172 8 11 chr10 31653447 31653709 -113935579 + AluJo SINE Alu 13 273 -39 1095 74 0 29 chr10 31653714 31653889 -113935399 + (GAAA)n Simple_repeat Simple_repeat 3 172 0 535 241 47 47 chr10 31653924 31654094 -113935194 - MIR SINE MIR 0 262 93 1926 39 9 0 chr10 31654645 31654875 -113934413 + AluY SINE Alu 66 297 -14 1383 195 18 18 chr10 31654889 31655205 -113934083 + AluJo SINE Alu 1 316 0 243 88 0 0 chr10 31655653 31655687 -113933601 + (GAAAA)n Simple_repeat Simple_repeat 2 35 0 2112 136 0 0 chr10 31655749 31656059 -113933229 - AluSx SINE Alu -2 310 1 1551 260 63 5 chr10 31656335 31656750 -113932538 + LTR16C LTR ERVL 53 491 0 519 45 0 0 chr10 31657127 31657193 -113932095 + (TC)n Simple_repeat Simple_repeat 1 66 0 1569 160 167 14 chr10 31657621 31657915 -113931373 + MER1B DNA MER1_type 1 339 0 2040 115 0 10 chr10 31658125 31658429 -113930859 - AluSc SINE Alu -8 301 1 1576 178 3 23 chr10 31659104 31659407 -113929881 + AluJo SINE Alu 6 302 -10 1939 132 0 11 chr10 31659428 31659782 -113929506 - AluSx SINE Alu 0 351 1 7629 36 1 0 chr10 31660115 31661032 -113928256 + L1PA5 LINE L1 5232 6149 -5 2739 112 13 74 chr10 31661348 31661502 -113927786 - MER65A LTR ERV1 0 445 283 2027 108 0 3 chr10 31661502 31661789 -113927499 - AluSg SINE Alu -3 307 22 2739 112 13 74 chr10 31661789 31662108 -113927180 - MER65A LTR ERV1 -162 283 1 301 203 76 25 chr10 31662381 31662460 -113926828 - L1MC4 LINE L1 0 8042 7960 549 288 63 66 chr10 31662493 31663028 -113926260 - L1MC4 LINE L1 -69 7973 7334 600 275 122 13 chr10 31663776 31664005 -113925283 - MIR SINE MIR -8 254 1 370 270 70 50 chr10 31664908 31664938 -113924350 + L1MC4a LINE L1 5407 5435 -686 2100 132 0 0 chr10 31664938 31665249 -113924039 + AluSq SINE Alu 1 311 -2 370 270 70 50 chr10 31665249 31665377 -113923911 + L1MC4a LINE L1 5435 5559 -562 1658 170 3 3 chr10 31665377 31665665 -113923623 + AluJb SINE Alu 1 288 -24 370 270 70 50 chr10 31665665 31665856 -113923432 + L1MC4a LINE L1 5559 5745 -376 1945 119 6 10 chr10 31665856 31666167 -113923121 + AluSx SINE Alu 1 310 -2 370 270 70 50 chr10 31666167 31666444 -113922844 + L1MC4a LINE L1 5745 6110 -11 2126 96 20 0 chr10 31667128 31667421 -113921867 + AluSq SINE Alu 1 299 -14 1967 120 30 13 chr10 31667503 31667802 -113921486 - AluSg SINE Alu -6 304 1 2642 144 76 11 chr10 31667882 31668340 -113920948 + LTR45B LTR ERV1 2 489 0 204 97 0 0 chr10 31668348 31668379 -113920909 + (TATG)n Simple_repeat Simple_repeat 2 32 0 1732 160 0 3 chr10 31668381 31668669 -113920619 - AluSx SINE Alu -25 287 1 2025 112 3 0 chr10 31668934 31669221 -113920067 + AluSx SINE Alu 1 288 -24 1023 133 0 0 chr10 31669222 31669395 -113919893 + AluSq SINE Alu 133 305 0 1577 133 16 67 chr10 31669972 31670287 -113919001 - AluSx SINE Alu -13 299 1 369 264 104 8 chr10 31670356 31670481 -113918807 + MIR SINE MIR 66 202 -60 1048 236 77 60 chr10 31670486 31670875 -113918413 + MLT1C LTR MaLR 6 387 -239 1416 176 64 0 chr10 31670875 31671027 -113918261 - AluJo SINE Alu -28 284 143 389 36 0 18 chr10 31671027 31671083 -113918205 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 2166 64 0 0 chr10 31671086 31671351 -113917937 - AluSc SINE Alu -32 277 13 1416 176 64 0 chr10 31671351 31671461 -113917827 - AluJo SINE Alu -170 142 1 1048 236 77 60 chr10 31671461 31671573 -113917715 + MLT1C LTR MaLR 387 626 0 208 358 38 67 chr10 31671892 31672238 -113917050 - L2 LINE L2 -12 3260 2925 1209 164 91 46 chr10 31673061 31673324 -113915964 + AluJo SINE Alu 19 293 -19 2527 193 71 47 chr10 31673324 31673968 -113915320 - L1ME1 LINE L1 -51 6115 5488 5120 117 23 12 chr10 31673968 31674738 -113914550 - MER4E LTR ERV1 0 779 1 2527 193 71 47 chr10 31674738 31674862 -113914426 - L1ME1 LINE L1 -678 5488 5368 2353 80 17 3 chr10 31674862 31675163 -113914125 - AluSg SINE Alu -5 305 1 2527 193 71 47 chr10 31675163 31675261 -113914027 - L1ME1 LINE L1 -798 5368 5225 1048 212 28 25 chr10 31675273 31675629 -113913659 - L1ME1 LINE L1 -1227 4919 4362 319 41 41 0 chr10 31675961 31676010 -113913278 + (GAAA)n Simple_repeat Simple_repeat 1 51 0 725 179 8 0 chr10 31676869 31676986 -113912302 + FLAM_C SINE Alu 7 124 -19 272 83 21 0 chr10 31676986 31677034 -113912254 + (TTTTG)n Simple_repeat Simple_repeat 3 51 0 750 163 77 61 chr10 31677034 31677280 -113912008 + LTR56 LTR ERV1 76 325 -120 698 162 68 16 chr10 31677435 31677626 -113911662 - L1ME1 LINE L1 -2130 4016 3816 387 173 67 0 chr10 31677688 31677763 -113911525 + LTR23 LTR ERV1 358 437 0 187 315 0 0 chr10 31677769 31677823 -113911465 + L2 LINE L2 2992 3045 -227 446 360 67 27 chr10 31677981 31678575 -113910713 + L2 LINE L2 2238 2855 -459 3382 197 94 22 chr10 31678621 31679475 -113909813 - L1MC4a LINE L1 -3 7805 6891 233 279 11 142 chr10 31679518 31679708 -113909580 + L2 LINE L2 2931 3095 -177 1613 187 64 124 chr10 31680817 31681367 -113907921 - LTR40a LTR ERVL 0 519 3 183 256 0 0 chr10 31681687 31681726 -113907562 + MIR SINE MIR 220 258 -4 797 239 201 26 chr10 31681726 31682074 -113907214 - MLT1I LTR MaLR 0 409 1 1651 187 0 21 chr10 31682107 31682396 -113906892 + AluJb SINE Alu 14 296 -16 258 32 0 0 chr10 31682396 31682427 -113906861 + (TA)n Simple_repeat Simple_repeat 1 31 0 378 0 0 0 chr10 31682732 31682774 -113906514 + (CA)n Simple_repeat Simple_repeat 1 42 0 2343 82 3 35 chr10 31682840 31683155 -113906133 + AluSq SINE Alu 1 305 -8 2867 16 0 0 chr10 31684145 31684456 -113904832 - AluYa5 SINE Alu 0 311 1 223 303 34 34 chr10 31684565 31684684 -113904604 + L3b LINE CR1 1249 1367 -216 2323 113 0 0 chr10 31685017 31685328 -113903960 - AluSx SINE Alu -1 311 1 2357 113 0 0 chr10 31685559 31685870 -113903418 + AluSx SINE Alu 1 311 -1 274 297 187 0 chr10 31686282 31686437 -113902851 - MIR SINE MIR 0 262 79 1847 153 39 0 chr10 31686583 31686864 -113902424 + AluJo SINE Alu 1 292 -20 2352 121 0 0 chr10 31687350 31687663 -113901625 + AluSq SINE Alu 1 313 0 1702 161 61 84 chr10 31687685 31688127 -113901161 - MSTB1 LTR MaLR 0 432 1 22 0 0 0 chr10 31688498 31688520 -113900768 + AT_rich Low_complexity Low_complexity 1 22 0 25 0 0 0 chr10 31688551 31688576 -113900712 + AT_rich Low_complexity Low_complexity 1 25 0 472 191 0 187 chr10 31689438 31689567 -113899721 + MER112 DNA MER1_type 17 78 -182 552 186 124 0 chr10 31689567 31689680 -113899608 - FLAM_A SINE Alu -5 128 2 472 191 0 187 chr10 31689680 31689801 -113899487 + MER112 DNA MER1_type 78 220 -40 607 206 8 0 chr10 31690944 31691075 -113898213 + FLAM_C SINE Alu 2 133 0 2621 58 0 0 chr10 31691678 31691989 -113897299 - AluY SINE Alu 0 311 1 1343 105 89 189 chr10 31692037 31692454 -113896834 + MLT1B LTR MaLR 2 384 -12 188 235 29 44 chr10 31692636 31692704 -113896584 - MER5A DNA MER1_type -7 182 116 * 491 198 43 56 chr10 31692648 31692810 -113896478 + MER5A DNA MER1_type 30 189 0 268 174 0 0 chr10 31695631 31695677 -113893611 - MIR SINE MIR -113 149 104 491 247 64 89 chr10 31696424 31696537 -113892751 + MIR SINE MIR 32 137 -125 1663 149 71 4 chr10 31696537 31696818 -113892470 + AluJo SINE Alu 1 300 -12 491 247 64 89 chr10 31696818 31696939 -113892349 + MIR SINE MIR 137 260 -2 188 235 39 0 chr10 31699656 31699707 -113889581 - MIR SINE MIR -116 146 94 1728 141 67 30 chr10 31699938 31700235 -113889053 - AluJo SINE Alu -4 308 1 2454 98 0 0 chr10 31700281 31700588 -113888700 - AluSg SINE Alu -3 307 1 485 32 16 0 chr10 31700628 31700691 -113888597 + (CA)n Simple_repeat Simple_repeat 2 65 0 732 179 8 0 chr10 31702710 31702833 -113886455 + FRAM SINE Alu 1 119 -57 204 137 98 59 chr10 31703169 31703220 -113886068 - L2 LINE L2 -96 3217 3165 2235 106 0 0 chr10 31703385 31703677 -113885611 - AluSx SINE Alu -20 292 1 1913 164 0 0 chr10 31703920 31704207 -113885081 + AluJo SINE Alu 1 287 -25 23 0 0 0 chr10 31704207 31704230 -113885058 + AT_rich Low_complexity Low_complexity 1 23 0 2284 108 0 22 chr10 31705088 31705402 -113883886 - AluSx SINE Alu -5 307 1 294 29 0 0 chr10 31705736 31705771 -113883517 + (TG)n Simple_repeat Simple_repeat 2 36 0 27 0 0 0 chr10 31706563 31706590 -113882698 + AT_rich Low_complexity Low_complexity 1 27 0 1296 170 59 95 chr10 31706744 31707050 -113882238 - AluJo SINE Alu -12 300 6 504 292 54 13 chr10 31707060 31707293 -113881995 - MIR SINE MIR -10 252 10 2119 114 50 3 chr10 31707890 31708188 -113881100 - AluSx SINE Alu 0 312 1 2568 213 64 86 chr10 31708385 31708876 -113880412 - L1MEc LINE L1 -3616 2599 2099 207 69 0 0 chr10 31708876 31708905 -113880383 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 2568 213 64 86 chr10 31708905 31708997 -113880291 - L1MEc LINE L1 -4116 2099 2007 1922 155 3 3 chr10 31708997 31709287 -113880001 + AluSx SINE Alu 3 292 -20 2568 213 64 86 chr10 31709287 31709922 -113879366 - L1MEc LINE L1 -4208 2007 1454 926 183 29 17 chr10 31709925 31710100 -113879188 - AluJo SINE Alu -18 294 118 1162 220 65 21 chr10 31710100 31710528 -113878760 - L1MEc LINE L1 -4954 1442 996 1625 228 132 32 chr10 31710547 31710832 -113878456 - L1MEc LINE L1 -5471 925 670 852 100 77 8 chr10 31710832 31710962 -113878326 - MER85 DNA T2_type 0 139 1 1625 228 132 32 chr10 31710962 31711006 -113878282 - L1MEc LINE L1 -5726 670 632 2129 142 7 0 chr10 31711006 31711315 -113877973 - AluSx SINE Alu -1 311 1 1625 228 132 32 chr10 31711315 31711551 -113877737 - L1MEc LINE L1 -5764 632 302 304 270 70 10 chr10 31711606 31711706 -113877582 - MER5A DNA MER1_type -80 109 4 4735 167 36 39 chr10 31711717 31711804 -113877484 - Charlie5 DNA MER1_type -6 2618 2532 2387 78 0 3 chr10 31711804 31712098 -113877190 - AluSc SINE Alu -16 293 1 4735 167 36 39 chr10 31712098 31712884 -113876404 - Charlie5 DNA MER1_type -92 2532 1747 2289 109 10 19 chr10 31712884 31713197 -113876091 - AluY SINE Alu -1 310 1 4735 167 36 39 chr10 31713197 31713390 -113875898 - Charlie5 DNA MER1_type -877 1747 1555 3172 194 63 57 chr10 31713393 31714294 -113874994 - Charlie5 DNA MER1_type -1705 907 1 1831 141 57 10 chr10 31715172 31715470 -113873818 - AluJb SINE Alu 0 312 1 374 277 27 9 chr10 31715985 31716097 -113873191 + MIR3 SINE MIR 49 162 -46 456 239 58 19 chr10 31716171 31716326 -113872962 - MER103 DNA DNA -3 163 3 1012 195 41 32 chr10 31716406 31716627 -113872661 + MER58A DNA MER1_type 1 223 -1 264 59 0 0 chr10 31716850 31716884 -113872404 + (CA)n Simple_repeat Simple_repeat 1 34 0 2284 105 10 7 chr10 31716946 31717252 -113872036 - AluSx SINE Alu -5 307 1 257 277 14 78 chr10 31717331 31717472 -113871816 - HAL1b LINE L1 -474 874 743 2129 141 47 81 chr10 31717509 31717956 -113871332 - MSTB1 LTR MaLR 0 432 1 42 0 0 0 chr10 31718096 31718138 -113871150 + AT_rich Low_complexity Low_complexity 1 42 0 582 119 0 69 chr10 31718138 31718239 -113871049 - U6 snRNA snRNA 0 107 14 440 127 0 0 chr10 31718239 31718302 -113870986 - AluS SINE Alu -255 63 1 2140 109 3 7 chr10 31718368 31718653 -113870635 - AluSx SINE Alu -13 299 16 2030 133 0 0 chr10 31718732 31719018 -113870270 - AluSx SINE Alu -16 296 11 24 0 0 0 chr10 31719302 31719326 -113869962 + AT_rich Low_complexity Low_complexity 1 24 0 761 233 112 109 chr10 31719681 31719789 -113869499 - LTR41 LTR ERVL -25 748 642 1911 140 27 10 chr10 31719789 31720081 -113869207 + AluJo SINE Alu 1 297 -15 761 233 112 109 chr10 31720081 31720716 -113868572 - LTR41 LTR ERVL -131 642 3 306 280 37 63 chr10 31720736 31720767 -113868521 - HAL1 LINE L1 -1185 1322 1292 1401 154 30 21 chr10 31720767 31721001 -113868287 + MER46A DNA MER2_type 1 236 0 306 280 37 63 chr10 31721001 31721319 -113867969 - HAL1 LINE L1 -1215 1292 982 1764 148 36 13 chr10 31721504 31721809 -113867479 - AluSq SINE Alu -1 312 1 2814 20 0 0 chr10 31721867 31722171 -113867117 - AluY SINE Alu -7 304 1 318 220 0 0 chr10 31722209 31722309 -113866979 + (TG)n Simple_repeat Simple_repeat 1 100 0 823 121 0 0 chr10 31723055 31723171 -113866117 + FLAM_C SINE Alu 20 135 -8 21 57 0 0 chr10 31723178 31723213 -113866075 + AT_rich Low_complexity Low_complexity 1 35 0 1343 279 22 106 chr10 31723225 31723547 -113865741 + AluSc SINE Alu 3 297 -12 311 205 17 17 chr10 31723818 31723935 -113865353 + T-rich Low_complexity Low_complexity 3 119 0 22 35 0 0 chr10 31724099 31724128 -113865160 + AT_rich Low_complexity Low_complexity 1 29 0 1009 179 0 6 chr10 31725283 31725451 -113863837 + FRAM SINE Alu 1 160 -16 1351 107 5 5 chr10 31726564 31726760 -113862528 - AluSg/x SINE Alu 0 312 117 320 184 37 118 chr10 31726814 31726950 -113862338 - LTR48 LTR ERV1 -9 778 654 1069 156 0 33 chr10 31727078 31727289 -113861999 + AluSc SINE Alu 91 294 -15 371 206 127 26 chr10 31727297 31727464 -113861824 - MER34 LTR ERV1 -348 237 1 1413 156 5 0 chr10 31727676 31727888 -113861400 + AluSx SINE Alu 1 213 -99 602 322 31 4 chr10 31728913 31729140 -113860148 + MIR SINE MIR 28 260 -2 4518 49 7 0 chr10 31729197 31729748 -113859540 - L1PA7 LINE L1 -4 6150 5596 180 0 0 0 chr10 31729980 31730000 -113859288 + (CAT)n Simple_repeat Simple_repeat 2 21 0 395 294 14 46 chr10 31730104 31730322 -113858966 + L1MC5 LINE L1 7010 7220 -741 511 298 57 20 chr10 31730456 31730805 -113858483 + L1MC5 LINE L1 7272 7633 -328 420 147 0 0 chr10 31730844 31730912 -113858376 - MIR SINE MIR -174 88 21 233 188 62 31 chr10 31730930 31730994 -113858294 + MIR SINE MIR 124 189 -73 229 315 34 0 chr10 31731657 31731746 -113857542 + L1MC4 LINE L1 7781 7872 -170 1572 193 7 10 chr10 31731833 31732129 -113857159 + AluJo SINE Alu 13 307 -5 349 326 49 21 chr10 31732564 31732708 -113856580 + MLT1I LTR MaLR 9 156 -253 679 150 32 0 chr10 31732792 31733052 -113856236 + CT-rich Low_complexity Low_complexity 1 268 0 267 122 41 0 chr10 31733055 31733104 -113856184 + MLT1I LTR MaLR 345 395 -14 614 279 14 19 chr10 31733243 31733451 -113855837 - MIR SINE MIR -55 207 1 447 308 27 0 chr10 31733975 31734121 -113855167 - MIR SINE MIR -75 187 38 1698 159 16 29 chr10 31734659 31734887 -113854401 + AluJo SINE Alu 1 230 -82 2375 115 62 3 chr10 31734887 31735243 -113854045 - MER51B LTR ERV1 0 377 1 1698 159 16 29 chr10 31735243 31735312 -113853976 + AluJo SINE Alu 230 296 -16 2684 48 0 0 chr10 31735312 31735621 -113853667 + AluY SINE Alu 1 309 -2 1698 159 16 29 chr10 31735621 31735637 -113853651 + AluJo SINE Alu 296 311 -1 23 0 0 0 chr10 31736230 31736253 -113853035 + AT_rich Low_complexity Low_complexity 1 23 0 358 277 28 68 chr10 31736255 31736432 -113852856 - L1MC5 LINE L1 -48 7913 7744 2077 95 81 0 chr10 31737255 31737539 -113851749 + AluSq SINE Alu 1 307 -6 8803 200 58 36 chr10 31738155 31738427 -113850861 + L1MDa LINE L1 25 289 -6251 857 122 0 30 chr10 31738427 31738558 -113850730 + FLAM_C SINE Alu 5 131 -2 8803 200 58 36 chr10 31738558 31740286 -113849002 + L1MDa LINE L1 289 2253 -4287 1536 200 3 32 chr10 31740286 31740601 -113848687 + AluJo SINE Alu 2 307 -5 8803 200 58 36 chr10 31740601 31741326 -113847962 + L1MDa LINE L1 2253 2960 -3580 436 272 16 0 chr10 31741331 31741456 -113847832 - L1M4 LINE L1 -3070 3076 2950 2477 182 8 45 chr10 31741473 31741989 -113847299 + L1MD1 LINE L1 5746 6242 0 940 143 7 0 chr10 31741997 31742137 -113847151 + FAM SINE Alu 18 158 -27 28 29 0 0 chr10 31742141 31742176 -113847112 + AT_rich Low_complexity Low_complexity 1 35 0 227 268 52 41 chr10 31742722 31742819 -113846469 + L2 LINE L2 2986 3083 -189 186 255 20 39 chr10 31742917 31742934 -113846354 + L2 LINE L2 3197 3213 -59 575 201 214 0 chr10 31742934 31743088 -113846200 + MER5A DNA MER1_type 3 189 0 186 255 20 39 chr10 31743088 31743121 -113846167 + L2 LINE L2 3213 3246 -26 2055 128 30 3 chr10 31743510 31743814 -113845474 + AluSx SINE Alu 1 312 0 1964 141 0 3 chr10 31743837 31744121 -113845167 + AluJb SINE Alu 1 283 -29 279 0 0 0 chr10 31744124 31744155 -113845133 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 1730 180 10 10 chr10 31744843 31745138 -113844150 - AluJo SINE Alu -13 299 5 2288 103 3 0 chr10 31745757 31746058 -113843230 + AluSg SINE Alu 1 302 -8 257 51 26 0 chr10 31746149 31746188 -113843100 + (GA)n Simple_repeat Simple_repeat 2 41 0 349 341 22 0 chr10 31747376 31747511 -113841777 + MIR3 SINE MIR 64 201 -7 472 302 112 6 chr10 31747836 31748015 -113841273 - MIR SINE MIR -10 252 55 182 241 56 0 chr10 31748098 31748152 -113841136 + L2 LINE L2 2728 2784 -530 1313 200 7 122 chr10 31748287 31748697 -113840591 + MLT1A1 LTR MaLR 3 365 0 226 184 0 20 chr10 31748890 31748939 -113840349 + L2 LINE L2 3262 3309 -4 2295 97 0 0 chr10 31749291 31749580 -113839708 - AluSg1 SINE Alu -18 291 3 373 140 0 0 chr10 31749780 31749837 -113839451 + FLAM SINE Alu 76 132 -1 209 300 153 7 chr10 31750451 31750601 -113838687 - MIR3 SINE MIR -7 201 30 23 0 0 0 chr10 31750825 31750848 -113838440 + AT_rich Low_complexity Low_complexity 1 23 0 1881 128 0 75 chr10 31750851 31751171 -113838117 + AluSx SINE Alu 1 296 -16 603 249 37 16 chr10 31751670 31751859 -113837429 + L1MC/D LINE L1 5569 5761 -2047 * 1733 130 0 4 chr10 31751856 31752118 -113837170 - MSTA-int LTR MaLR -1390 261 1 2098 148 65 32 chr10 31752120 31752477 -113836811 - MSTA LTR MaLR -2 426 52 1810 189 3 0 chr10 31752477 31752778 -113836510 - AluJo SINE Alu -10 302 1 2098 148 65 32 chr10 31752778 31752832 -113836456 - MSTA LTR MaLR -376 52 1 1319 280 48 46 chr10 31752832 31753415 -113835873 - L2 LINE L2 -445 2869 2286 545 265 69 111 chr10 31753454 31753468 -113835820 - MLT1J LTR MaLR -8 503 490 2505 104 11 8 chr10 31753468 31753822 -113835466 + THE1A LTR MaLR 1 355 0 545 265 69 111 chr10 31753822 31754140 -113835148 - MLT1J LTR MaLR -21 490 190 1967 147 0 3 chr10 31754140 31754433 -113834855 - AluJo SINE Alu -5 307 16 545 265 69 111 chr10 31754433 31754521 -113834767 - MLT1J LTR MaLR -321 190 100 211 270 27 14 chr10 31754941 31755015 -113834273 + GA-rich Low_complexity Low_complexity 1 75 0 1806 161 13 56 chr10 31756078 31756470 -113832818 + THE1C LTR MaLR 1 375 0 606 312 28 0 chr10 31756473 31756723 -113832565 - L1MC4 LINE L1 -981 7061 6805 2111 113 0 64 chr10 31758548 31758875 -113830413 - AluSq SINE Alu -7 306 1 2283 102 0 0 chr10 31759397 31759728 -113829560 + AluSx SINE Alu 1 331 0 370 289 168 26 chr10 31760246 31760324 -113828964 - L2 LINE L2 -188 3125 3059 2310 93 7 7 chr10 31760324 31760625 -113828663 - AluSx SINE Alu -11 301 1 370 289 168 26 chr10 31760625 31760926 -113828362 - L2 LINE L2 -254 3059 2802 1709 162 10 26 chr10 31760926 31761228 -113828060 + AluJo SINE Alu 4 300 -12 1939 123 87 0 chr10 31761228 31761504 -113827784 + AluSx SINE Alu 1 300 -12 370 289 168 26 chr10 31761504 31761613 -113827675 - L2 LINE L2 -510 2803 2554 267 157 50 0 chr10 31761694 31761805 -113827483 + CT-rich Low_complexity Low_complexity 1 116 0 496 278 5 97 chr10 31761882 31762098 -113827190 - MER91A DNA MER1_type 0 196 1 691 279 142 43 chr10 31762098 31762264 -113827024 - L2 LINE L2 -961 2353 2205 2315 103 0 13 chr10 31762264 31762576 -113826712 - AluSc SINE Alu 0 309 2 691 279 142 43 chr10 31762576 31763087 -113826201 - L2 LINE L2 -1109 2205 1609 195 69 0 0 chr10 31763456 31763485 -113825803 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 261 285 70 12 chr10 31763886 31764058 -113825230 + L1ME4a LINE L1 5269 5450 -714 1109 99 0 52 chr10 31764131 31764303 -113824985 - AluSg/x SINE Alu -16 294 132 435 271 150 31 chr10 31764303 31764551 -113824737 + L1ME4a LINE L1 5549 5766 -355 1467 196 32 54 chr10 31764551 31764924 -113824364 + MLT1A1 LTR MaLR 1 365 0 435 271 150 31 chr10 31764924 31765187 -113824101 + L1ME4a LINE L1 5766 6121 0 1250 171 5 0 chr10 31765212 31765405 -113823883 - AluJo SINE Alu -118 194 1 197 200 100 57 chr10 31765670 31765740 -113823548 + L2 LINE L2 3200 3272 0 224 309 0 0 chr10 31765832 31765900 -113823388 + MER5A DNA MER1_type 10 77 -112 2276 119 0 0 chr10 31766032 31766326 -113822962 - AluSx SINE Alu -18 294 1 224 39 0 0 chr10 31766498 31766524 -113822764 + (T)n Simple_repeat Simple_repeat 1 26 0 352 203 27 0 chr10 31767409 31767483 -113821805 - MER34 LTR ERV1 -22 520 445 225 192 77 0 chr10 31767495 31767547 -113821741 - LTR48 LTR ERV1 -118 669 614 332 258 39 45 chr10 31767587 31767742 -113821546 - LTR48B LTR ERV1 -350 294 141 * 404 261 8 25 chr10 31767721 31767840 -113821448 - MER34 LTR ERV1 -423 119 3 308 83 21 0 chr10 31767979 31768027 -113821261 + (TC)n Simple_repeat Simple_repeat 1 49 0 2010 134 40 0 chr10 31768027 31768326 -113820962 - AluSx SINE Alu -1 311 1 301 345 42 12 chr10 31768659 31768824 -113820464 + MIR SINE MIR 8 177 -85 2156 105 0 20 chr10 31768956 31769252 -113820036 - AluSx SINE Alu -22 290 1 1838 155 10 13 chr10 31770041 31770345 -113818943 + AluJo SINE Alu 1 303 -9 2215 125 0 0 chr10 31770638 31770950 -113818338 + AluSx SINE Alu 1 312 0 623 278 44 31 chr10 31772974 31773201 -113816087 + MLT1H LTR MaLR 2 231 -318 342 277 57 34 chr10 31773319 31773496 -113815792 - MLT1G LTR MaLR 0 590 410 324 265 34 26 chr10 31773682 31773799 -113815489 - MLT1G LTR MaLR -462 128 11 2083 138 0 3 chr10 31773955 31774285 -113815003 + AluSx SINE Alu 1 329 0 2239 165 41 13 chr10 31774771 31775232 -113814056 - MER101 LTR ERV1 0 474 1 477 217 0 57 chr10 31775249 31775355 -113813933 - L1M3 LINE L1 -400 5783 5684 776 285 88 40 chr10 31775674 31776247 -113813041 + MLT1G LTR MaLR 17 590 0 1361 263 25 28 chr10 31776486 31776843 -113812445 - MER115 DNA AcHobo 0 693 338 565 227 35 67 chr10 31777015 31777240 -113812048 - MER77 LTR ERV1 -4 601 414 33 0 0 0 chr10 31777390 31777423 -113811865 + AT_rich Low_complexity Low_complexity 1 33 0 2047 107 0 0 chr10 31778046 31778318 -113810970 + AluSq SINE Alu 31 302 -11 1789 153 4 14 chr10 31778484 31778765 -113810523 - AluJb SINE Alu -34 278 1 308 300 8 39 chr10 31778766 31778896 -113810392 - MIR SINE MIR -9 253 128 278 170 0 0 chr10 31778970 31779023 -113810265 - L2 LINE L2 0 3313 3261 273 278 154 25 chr10 31779492 31779654 -113809634 - L3 LINE CR1 -111 1466 1284 188 298 170 7 chr10 31779668 31779809 -113809479 - L3 LINE CR1 -270 1307 1144 1112 168 0 0 chr10 31780160 31780327 -113808961 - AluJb SINE Alu -18 294 128 2298 104 10 0 chr10 31780467 31780764 -113808524 - AluSx SINE Alu -12 300 1 605 274 58 53 chr10 31780861 31781087 -113808201 + MER115 DNA AcHobo 338 564 -129 2033 117 9 27 chr10 31781134 31781468 -113807820 - L1PA14 LINE L1 0 6161 5834 768 200 0 0 chr10 31781494 31781648 -113807640 - FLAM_C SINE Alu 0 157 4 21 0 0 0 chr10 31781849 31781870 -113807418 + AT_rich Low_complexity Low_complexity 1 21 0 2338 83 7 0 chr10 31781967 31782267 -113807021 + AluY SINE Alu 1 302 -9 241 231 30 127 chr10 31782609 31782743 -113806545 - MIR SINE MIR -79 183 63 484 106 39 7 chr10 31783578 31783796 -113805492 + (TCCA)n Simple_repeat Simple_repeat 1 293 0 579 144 50 9 chr10 31783832 31784058 -113805230 + (TCCA)n Simple_repeat Simple_repeat 1 235 0 673 133 38 14 chr10 31784080 31784377 -113804911 + (TCCA)n Simple_repeat Simple_repeat 1 304 0 1030 206 161 0 chr10 31785361 31785604 -113803684 + AluSx SINE Alu 1 282 -30 347 0 0 23 chr10 31785608 31785652 -113803636 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 610 189 18 0 chr10 31785707 31785818 -113803470 - MER81 DNA DNA 0 114 2 314 253 156 13 chr10 31787389 31787500 -113801788 - MIR SINE MIR -1 261 121 1650 192 4 4 chr10 31787500 31787781 -113801507 - AluJb SINE Alu -19 293 13 314 253 156 13 chr10 31787781 31787823 -113801465 - MIR SINE MIR -141 121 86 224 284 43 17 chr10 31787857 31787973 -113801315 - L3b LINE CR1 -152 1431 1313 26 30 0 0 chr10 31788642 31788675 -113800613 + AT_rich Low_complexity Low_complexity 1 33 0 182 289 31 31 chr10 31788983 31789080 -113800208 + L2 LINE L2 1812 1908 -1406 263 394 0 8 chr10 31789578 31789710 -113799578 + L2 LINE L2 3142 3272 0 676 257 87 9 chr10 31789813 31790031 -113799257 + MIR SINE MIR 22 256 -6 356 0 0 22 chr10 31792178 31792223 -113797065 + (TAA)n Simple_repeat Simple_repeat 2 45 0 257 245 0 0 chr10 31792843 31792896 -113796392 - L1MC5 LINE L1 -1188 6773 6721 254 290 0 0 chr10 31793626 31793695 -113795593 + MIR SINE MIR 187 255 -7 1817 184 13 0 chr10 31793911 31794216 -113795072 + AluJo SINE Alu 1 309 -3 563 228 60 48 chr10 31795814 31795981 -113793307 - MER69A DNA AcHobo -8 169 1 784 140 15 37 chr10 31796599 31796735 -113792553 - FLAM_C SINE Alu 0 133 1 360 264 47 0 chr10 31797191 31797297 -113791991 - MER103 DNA DNA -1 165 55 2189 118 6 10 chr10 31797304 31797617 -113791671 + AluSx SINE Alu 1 312 0 252 327 99 19 chr10 31798207 31798245 -113791043 - MIR SINE MIR -70 192 158 3566 60 4 2 chr10 31798245 31798696 -113790592 - L1PA13 LINE L1 -3 6160 5709 252 327 99 19 chr10 31798696 31798821 -113790467 - MIR SINE MIR -104 158 19 468 252 77 19 chr10 31800423 31800578 -113788710 + LTR37B LTR ERV1 6 169 -299 967 134 47 6 chr10 31800580 31800751 -113788537 + L1MA5 LINE L1 6059 6236 -64 887 160 13 0 chr10 31800751 31800901 -113788387 + MSTB1 LTR MaLR 1 152 -274 1603 137 72 12 chr10 31801008 31801308 -113787980 + MSTB1 LTR MaLR 130 432 0 408 94 31 0 chr10 31801308 31801372 -113787916 + L1MA5 LINE L1 6230 6295 -5 590 223 93 40 chr10 31801447 31801694 -113787594 + LTR37B LTR ERV1 198 457 -11 624 235 65 0 chr10 31802677 31802847 -113786441 + L1PB4 LINE L1 5976 6156 0 1914 167 7 0 chr10 31802938 31803238 -113786050 + AluSx SINE Alu 1 302 -10 21 57 0 0 chr10 31803796 31803831 -113785457 + AT_rich Low_complexity Low_complexity 1 35 0 393 194 15 0 chr10 31803832 31803899 -113785389 + MER45 DNA AcHobo 1513 1580 -1 2222 114 3 19 chr10 31804926 31805243 -113784045 - AluSx SINE Alu 0 312 1 373 294 56 20 chr10 31805322 31805519 -113783769 + MER31-int LTR ERV1 3855 4058 -878 1767 176 58 6 chr10 31805864 31806194 -113783094 + MLT1A1 LTR MaLR 19 365 0 823 205 72 85 chr10 31806194 31806525 -113782763 + LTR37B LTR ERV1 92 418 -50 1912 161 0 7 chr10 31806527 31806825 -113782463 - AluJo SINE Alu -16 296 1 5855 184 37 6 chr10 31807081 31808334 -113780954 - L1 LINE L1 -1715 4431 3140 2140 81 36 32 chr10 31808457 31808766 -113780522 - AluSg SINE Alu 0 310 1 1080 239 11 11 chr10 31809856 31810116 -113779172 - MIR SINE MIR 0 262 3 210 345 0 0 chr10 31810140 31810195 -113779093 + L2 LINE L2 3251 3305 -8 951 233 43 0 chr10 31811025 31811235 -113778053 + MER58A DNA MER1_type 2 220 -4 259 126 0 0 chr10 31812981 31813020 -113776268 + AluSp SINE Alu 137 170 -133 1608 167 24 20 chr10 31813025 31813318 -113775970 + AluJo SINE Alu 15 308 -4 379 315 95 45 chr10 31814365 31814724 -113774564 - L2 LINE L2 -571 2743 2367 1079 141 18 12 chr10 31814977 31815147 -113774141 + AluJb SINE Alu 126 296 -16 265 302 63 50 chr10 31815488 31815647 -113773641 + MLT1K LTR MaLR 198 358 -230 3802 177 43 55 chr10 31815835 31816133 -113773155 - L1MB7 LINE L1 -15 6169 5869 2239 193 39 55 chr10 31816133 31816174 -113773114 - MLT2B3 LTR ERVL 0 554 514 351 0 0 0 chr10 31816174 31816213 -113773075 + (TA)n Simple_repeat Simple_repeat 2 40 0 2239 193 39 55 chr10 31816213 31816732 -113772556 - MLT2B3 LTR ERVL -40 514 3 3802 177 43 55 chr10 31816732 31817638 -113771650 - L1MB7 LINE L1 -315 5869 4973 411 254 16 8 chr10 31817764 31817886 -113771402 - MER103 DNA DNA -10 156 34 1204 304 68 2 chr10 31817931 31818243 -113771045 + LTR16A LTR ERVL 25 370 -80 573 15 0 0 chr10 31818243 31818309 -113770979 + (TTCCC)n Simple_repeat Simple_repeat 1 66 0 1204 304 68 2 chr10 31818309 31818391 -113770897 + LTR16A LTR ERVL 370 445 -5 465 269 0 0 chr10 31818685 31818793 -113770495 + L2 LINE L2 3201 3308 -5 1006 105 7 20 chr10 31819039 31819192 -113770096 - AluSg/x SINE Alu -13 297 147 316 208 26 52 chr10 31819295 31819372 -113769916 - MER20 DNA MER1_type -142 77 3 921 222 124 50 chr10 31819455 31819837 -113769451 - MLT1G LTR MaLR 0 530 129 2086 137 10 0 chr10 31819846 31820145 -113769143 - AluSx SINE Alu -10 302 1 1970 92 81 18 chr10 31820771 31821044 -113768244 - AluSx SINE Alu -22 290 1 2064 128 0 41 chr10 31821172 31821491 -113767797 - AluSx SINE Alu -6 306 1 814 173 27 129 chr10 31821893 31822188 -113767100 + MER33 DNA MER1_type 6 270 -54 333 174 14 0 chr10 31822228 31822297 -113766991 + MER33 DNA MER1_type 272 341 -22 204 260 0 0 chr10 31822655 31822705 -113766583 - L2 LINE L2 -1 3312 3263 554 233 171 29 chr10 31823712 31824021 -113765267 - L1MC4 LINE L1 0 8042 7690 216 0 0 0 chr10 31824076 31824100 -113765188 + (T)n Simple_repeat Simple_repeat 1 24 0 739 225 7 0 chr10 31824148 31824299 -113764989 + MER34 LTR ERV1 1 152 -390 2169 141 0 0 chr10 31824299 31824598 -113764690 + AluSq SINE Alu 1 299 -14 1151 108 0 0 chr10 31824600 31824775 -113764513 + AluSq SINE Alu 139 313 0 490 121 52 69 chr10 31824787 31824903 -113764385 - L1ME1 LINE L1 -146 6020 5907 254 240 20 0 chr10 31825829 31825879 -113763409 + MER5A DNA MER1_type 1 51 -138 1187 232 111 24 chr10 31825881 31826379 -113762909 - MLT1F LTR MaLR -2 540 9 655 177 24 0 chr10 31826395 31826519 -113762769 + MER5A DNA MER1_type 61 187 -2 1044 191 61 14 chr10 31826671 31827086 -113762202 + MLT1D LTR MaLR 5 505 0 2182 129 39 3 chr10 31827366 31827699 -113761589 - MSTA LTR MaLR -83 345 1 1006 214 68 93 chr10 31827724 31828046 -113761242 - MER77 LTR ERV1 -240 365 52 1661 136 0 66 chr10 31828364 31828665 -113760623 - AluJb SINE Alu -31 281 1 541 282 182 42 chr10 31828859 31829179 -113760109 + L3 LINE CR1 391 773 -804 1760 148 0 23 chr10 31829179 31829483 -113759805 + AluJo SINE Alu 1 297 -15 541 282 182 42 chr10 31829483 31829541 -113759747 + L3 LINE CR1 773 822 -755 807 108 0 0 chr10 31829551 31829671 -113759617 + (TA)n Simple_repeat Simple_repeat 1 120 0 1243 290 148 21 chr10 31829829 31830350 -113758938 + L3 LINE CR1 872 1458 -119 517 270 17 63 chr10 31831994 31832168 -113757120 + MER5B DNA MER1_type 13 178 0 250 211 70 18 chr10 31832523 31832580 -113756708 + MIR3 SINE MIR 97 156 -52 2561 110 16 14 chr10 31832995 31833358 -113755930 + THE1B LTR MaLR 1 364 0 376 232 150 63 chr10 31834121 31834328 -113754960 - L2 LINE L2 -5 3308 3084 204 229 0 21 chr10 31834705 31834753 -113754535 + GA-rich Low_complexity Low_complexity 3 49 0 29 132 0 0 chr10 31835095 31835148 -113754140 + GC_rich Low_complexity Low_complexity 1 53 0 383 270 9 47 chr10 31835374 31835631 -113753657 + GA-rich Low_complexity Low_complexity 1 247 0 189 292 21 0 chr10 31835816 31835864 -113753424 - L2 LINE L2 -87 3185 3137 389 248 36 22 chr10 31836645 31836782 -113752506 + MIR3 SINE MIR 21 159 -49 1608 158 17 20 chr10 31837872 31838164 -113751124 - AluJb SINE Alu -21 291 1 353 299 19 0 chr10 31838164 31838271 -113751017 - L2 LINE L2 -12 3301 3193 277 308 83 13 chr10 31838421 31838577 -113750711 + MIR SINE MIR 89 255 -7 426 250 42 17 chr10 31838957 31839077 -113750211 + MIR SINE MIR 62 184 -78 2299 161 3 6 chr10 31839201 31839567 -113749721 - MLT1A1 LTR MaLR 0 365 1 1408 189 10 16 chr10 31839940 31840247 -113749041 + AluJo SINE Alu 1 305 -7 2284 131 103 5 chr10 31840254 31840644 -113748644 - MSTA LTR MaLR 0 428 1 787 218 73 109 chr10 31841523 31841973 -113747315 + MLT1H LTR MaLR 117 391 -18 734 222 46 42 chr10 31842032 31842261 -113747027 - MLT2D LTR ERVL 0 414 227 1007 126 116 37 chr10 31842305 31842520 -113746768 - AluJo SINE Alu -6 306 75 787 231 46 5 chr10 31842526 31842721 -113746567 - MLT2D LTR ERVL -211 203 1 303 242 121 20 chr10 31842784 31842883 -113746405 + MIR SINE MIR 19 127 -81 1710 137 161 75 chr10 31843189 31843561 -113745727 - MER4A LTR ERV1 0 664 261 580 120 22 0 chr10 31843563 31843655 -113745633 - MER4A LTR ERV1 -570 94 1 390 303 86 41 chr10 31843822 31844112 -113745176 + MLT1K LTR MaLR 124 426 -162 1316 174 8 0 chr10 31844208 31844449 -113744839 - AluJo SINE Alu -30 282 40 1386 186 6 35 chr10 31845158 31845476 -113743812 - AluJo SINE Alu -1 311 3 201 171 24 0 chr10 31845952 31845993 -113743295 + (CA)n Simple_repeat Simple_repeat 2 43 0 232 195 13 39 chr10 31846291 31846368 -113742920 + (TTA)n Simple_repeat Simple_repeat 3 77 0 200 236 27 146 chr10 31846539 31846649 -113742639 + MIR3 SINE MIR 109 205 -3 971 284 77 0 chr10 31846842 31847141 -113742147 + MER69 DNA AcHobo 2 323 -903 340 298 107 51 chr10 31847351 31847529 -113741759 + MIR SINE MIR 17 204 -58 272 276 46 11 chr10 31847692 31847779 -113741509 - MIR SINE MIR -81 127 38 578 292 19 48 chr10 31847917 31848126 -113741162 - MIR SINE MIR -58 204 2 636 225 103 9 chr10 31848479 31848639 -113740649 + MER5B DNA MER1_type 3 183 -6 1907 136 0 17 chr10 31848728 31849029 -113740259 - AluSx SINE Alu -14 298 3 1125 120 6 17 chr10 31849031 31849206 -113740082 - AluJb SINE Alu -6 306 134 2076 123 0 3 chr10 31849206 31849506 -113739782 - AluSx SINE Alu -13 299 1 345 352 48 52 chr10 31849576 31849786 -113739502 + L1MC/D LINE L1 5538 5746 -2062 2099 96 24 0 chr10 31849966 31850258 -113739030 + AluSc SINE Alu 1 299 -10 927 136 116 0 chr10 31850405 31850552 -113738736 + AluSg SINE Alu 1 164 -146 845 138 0 0 chr10 31850952 31851075 -113738213 + FLAM_C SINE Alu 3 125 -8 1594 142 3 88 chr10 31852052 31852391 -113736897 - AluJo SINE Alu -2 310 1 222 306 0 16 chr10 31852461 31852523 -113736765 + MIR SINE MIR 5 65 -197 610 199 48 12 chr10 31852596 31852762 -113736526 - MER96B DNA MER1_type? -238 179 8 408 229 98 33 chr10 31852793 31852946 -113736342 + MIR SINE MIR 86 248 -14 1852 217 48 30 chr10 31853867 31854304 -113734984 + MLT1D LTR MaLR 1 445 -60 1378 131 131 0 chr10 31854305 31854550 -113734738 - AluSx SINE Alu -8 304 28 1834 131 28 3 chr10 31854696 31854979 -113734309 + AluSx SINE Alu 1 290 -22 222 118 0 0 chr10 31855112 31855146 -113734142 + (GGA)n Simple_repeat Simple_repeat 3 36 0 2352 90 0 0 chr10 31855908 31856218 -113733070 + AluSx SINE Alu 1 310 -2 706 298 38 23 chr10 31856927 31857189 -113732099 + MLT1I LTR MaLR 144 409 0 2222 112 0 3 chr10 31857416 31857730 -113731558 + AluSq SINE Alu 1 313 0 209 326 42 32 chr10 31857949 31858044 -113731244 + L2 LINE L2 3184 3279 -34 902 265 56 20 chr10 31858215 31858521 -113730767 + L1ME3A LINE L1 5559 5875 -295 330 230 6 36 chr10 31859070 31859235 -113730053 + CT-rich Low_complexity Low_complexity 3 162 0 2136 114 0 0 chr10 31859313 31859728 -113729560 - AluSx SINE Alu 0 415 1 559 195 24 12 chr10 31859746 31859915 -113729373 + CT-rich Low_complexity Low_complexity 3 173 0 249 210 16 16 chr10 31859949 31860011 -113729277 + CT-rich Low_complexity Low_complexity 1 62 0 546 302 40 18 chr10 31861155 31861380 -113727908 + MIR SINE MIR 8 237 -25 2853 149 50 27 chr10 31861382 31861777 -113727511 + MER1A DNA MER1_type 1 412 -2288 2113 112 0 19 chr10 31861777 31862076 -113727212 + AluSx SINE Alu 1 295 -17 876 108 0 0 chr10 31862076 31862206 -113727082 + (GGAA)n Simple_repeat Simple_repeat 3 132 0 2113 112 0 19 chr10 31862206 31862219 -113727069 + AluSx SINE Alu 295 307 -5 2853 149 50 27 chr10 31862219 31862338 -113726950 + MER1A DNA MER1_type 412 527 0 29 28 0 0 chr10 31862631 31862667 -113726621 + AT_rich Low_complexity Low_complexity 1 36 0 193 148 93 0 chr10 31864036 31864090 -113725198 + (TCTCTG)n Simple_repeat Simple_repeat 2 60 0 1414 186 16 47 chr10 31864492 31864814 -113724474 + AluJo SINE Alu 1 312 0 404 62 49 25 chr10 31864819 31864900 -113724388 + GA-rich Low_complexity Low_complexity 2 84 0 1729 209 98 15 chr10 31865228 31865625 -113723663 + MLT2B1 LTR ERVL 1 430 -90 518 212 10 0 chr10 31865626 31865725 -113723563 - MLT2B1 LTR ERVL -48 472 373 1923 169 30 82 chr10 31865748 31865922 -113723366 - MSTB1 LTR MaLR -12 420 238 2149 130 119 8 chr10 31865922 31866307 -113722981 - MSTA LTR MaLR 0 428 1 1923 169 30 82 chr10 31866307 31866571 -113722717 - MSTB1 LTR MaLR -194 238 5 285 30 0 0 chr10 31866576 31866609 -113722679 + MLT2C1 LTR ERVL 365 397 0 721 282 74 12 chr10 31866922 31867299 -113721989 + L2 LINE L2 2734 3134 -179 594 163 3 24 chr10 31867301 31867436 -113721852 - L1PA16 LINE L1 -118 6038 5913 361 268 27 27 chr10 31867443 31867555 -113721733 + MLT1J2 LTR MaLR 67 178 -272 230 130 93 19 chr10 31867588 31867642 -113721646 + MLT1J1 LTR MaLR 266 323 -123 1882 131 14 14 chr10 31867910 31868200 -113721088 + AluSx SINE Alu 1 290 -22 723 24 0 0 chr10 31868200 31868285 -113721003 + (GGAA)n Simple_repeat Simple_repeat 2 86 0 1161 158 29 29 chr10 31868403 31868643 -113720645 - THE1C LTR MaLR -7 368 129 309 135 0 0 chr10 31868687 31868739 -113720549 + (GGAA)n Simple_repeat Simple_repeat 3 54 0 2501 111 30 52 chr10 31869183 31869590 -113719698 - MER48 LTR ERV1 0 398 1 325 306 138 64 chr10 31869602 31869929 -113719359 + L2 LINE L2 2863 3213 -100 1641 206 25 15 chr10 31869941 31870266 -113719022 - LTR40a LTR ERVL -13 506 179 2205 168 38 33 chr10 31870277 31870827 -113718461 - MLT2A2 LTR ERVL 0 554 1 513 210 169 0 chr10 31870829 31870953 -113718335 - LTR40a LTR ERVL -350 169 25 1403 178 165 3 chr10 31871211 31871526 -113717762 - MER47A DNA MER2_type 0 366 1 350 284 101 41 chr10 31871528 31872043 -113717245 - L1MC4a LINE L1 -355 5807 5554 395 251 164 69 chr10 31872453 31872691 -113716597 + MLT1H LTR MaLR 225 521 -34 1966 107 0 0 chr10 31872691 31872972 -113716316 - AluSg SINE Alu 0 299 19 395 251 164 69 chr10 31872972 31873011 -113716277 + MLT1H LTR MaLR 521 555 0 2589 102 3 24 chr10 31873069 31873441 -113715847 - THE1B LTR MaLR 0 364 1 2212 142 31 0 chr10 31873779 31874132 -113715156 - THE1B LTR MaLR 0 364 1 207 203 0 0 chr10 31874802 31874861 -113714427 + CT-rich Low_complexity Low_complexity 2 60 0 309 366 84 14 chr10 31874862 31875075 -113714213 + L3b LINE CR1 1268 1495 -88 2076 115 0 0 chr10 31875300 31875586 -113713702 - AluSx SINE Alu -26 286 1 324 141 0 127 chr10 31875736 31875807 -113713481 + MLT1E1 LTR MaLR 1 62 -592 2233 93 0 13 chr10 31876433 31876744 -113712544 + AluSx SINE Alu 5 311 -1 1884 125 4 0 chr10 31877122 31877435 -113711853 - AluSx SINE Alu 0 314 1 274 229 66 119 chr10 31877471 31877698 -113711590 - L1MC4 LINE L1 -1 8041 7827 832 263 98 40 chr10 31877754 31878150 -113711138 - L1ME2 LINE L1 -33 6131 5713 2028 138 10 7 chr10 31878332 31878629 -113710659 - AluSx SINE Alu -14 298 1 242 296 45 11 chr10 31879034 31879122 -113710166 + MIR3 SINE MIR 91 181 -27 251 200 0 40 chr10 31879163 31879238 -113710050 + (TATG)n Simple_repeat Simple_repeat 1 72 0 1708 168 29 83 chr10 31880080 31880214 -113709074 + MLT1A1 LTR MaLR 1 141 -224 1730 108 0 21 chr10 31880214 31880455 -113708833 + AluSx SINE Alu 64 299 -13 1708 168 29 83 chr10 31880455 31880651 -113708637 + MLT1A1 LTR MaLR 141 310 -55 1974 180 22 32 chr10 31880651 31881051 -113708237 + MSTD LTR MaLR 1 396 0 1708 168 29 83 chr10 31881051 31881105 -113708183 + MLT1A1 LTR MaLR 310 365 0 1687 279 124 58 chr10 31881114 31882006 -113707282 - MER45C DNA AcHobo 0 953 3 1119 215 42 0 chr10 31882434 31882699 -113706589 + MER69 DNA AcHobo 82 357 -2169 1909 223 62 23 chr10 31883051 31883701 -113705587 + MER69 DNA AcHobo 1845 2519 -7 701 167 0 9 chr10 31883985 31884116 -113705172 + AluSg/x SINE Alu 177 308 -308 2041 126 0 0 chr10 31884116 31884401 -113704887 + AluSx SINE Alu 1 285 -27 701 167 0 9 chr10 31884401 31884426 -113704862 + AluSg/x SINE Alu 308 616 0 310 344 117 23 chr10 31885913 31886221 -113703067 + L2 LINE L2 2481 2817 -497 1990 109 18 21 chr10 31886242 31886555 -113702733 - AluSx SINE Alu 0 312 1 457 270 0 0 chr10 31887919 31888019 -113701269 - MER81 DNA DNA 0 114 15 1444 168 47 34 chr10 31888182 31888479 -113700809 - AluJo SINE Alu -11 301 1 671 149 37 0 chr10 31888493 31888600 -113700688 - FLAM_C SINE Alu -19 124 14 2212 114 0 3 chr10 31890179 31890478 -113698810 - AluSx SINE Alu -14 298 1 284 88 123 0 chr10 31891114 31891171 -113698117 - L1MA4A LINE L1 0 6303 6240 1123 70 0 0 chr10 31891255 31891397 -113697891 + L1MA1 LINE L1 6161 6302 0 955 139 48 12 chr10 31892331 31892496 -113696792 + FAM SINE Alu 5 175 0 2521 143 11 28 chr10 31892703 31893033 -113696255 - MSTA LTR MaLR 0 428 105 2340 96 0 7 chr10 31893033 31893336 -113695952 + AluSx SINE Alu 1 301 -11 2521 143 11 28 chr10 31893336 31893440 -113695848 - MSTA LTR MaLR -323 105 1 1058 124 0 68 chr10 31893627 31893804 -113695484 - AluSg/x SINE Alu -19 293 129 1210 245 65 7 chr10 31893884 31894300 -113694988 - Charlie2 DNA MER1_type -5 2857 2418 1128 133 0 0 chr10 31894417 31894575 -113694713 + FRAM SINE Alu 1 151 -25 433 247 123 12 chr10 31895950 31896120 -113693168 + MLT1J LTR MaLR 273 461 -50 2400 113 30 25 chr10 31896127 31896489 -113692799 + THE1B LTR MaLR 1 364 0 422 282 8 8 chr10 31896650 31896767 -113692521 - L2 LINE L2 0 3313 3197 2142 107 10 7 chr10 31896938 31897238 -113692050 + AluSx SINE Alu 1 301 -11 23 33 0 0 chr10 31897516 31897546 -113691742 + AT_rich Low_complexity Low_complexity 1 30 0 2178 139 108 8 chr10 31897585 31897972 -113691316 - MSTA LTR MaLR 0 428 3 1707 265 81 11 chr10 31898007 31898561 -113690727 - L1ME3A LINE L1 -19 6151 5559 200 323 43 32 chr10 31898733 31898826 -113690462 - L2 LINE L2 -36 3236 3143 2261 116 0 3 chr10 31899045 31899346 -113689942 - AluSq SINE Alu -13 300 1 719 294 38 23 chr10 31899573 31899835 -113689453 - MLT1I LTR MaLR 0 409 144 1683 154 29 29 chr10 31900596 31900907 -113688381 + AluSx SINE Alu 1 311 -1 255 188 94 58 chr10 31900910 31900972 -113688316 - Charlie2 DNA MER1_type -489 2373 2315 1814 168 0 30 chr10 31900972 31901276 -113688012 + AluJb SINE Alu 1 295 -17 255 188 94 58 chr10 31901276 31901351 -113687937 - Charlie2 DNA MER1_type -547 2315 2231 1774 223 73 62 chr10 31901428 31901554 -113687734 + MLT1E LTR MaLR 2 125 -468 1546 146 4 0 chr10 31901554 31901845 -113687443 + L1MA4 LINE L1 6031 6322 0 1774 223 73 62 chr10 31901845 31902264 -113687024 + MLT1E LTR MaLR 125 554 -39 524 265 59 55 chr10 31902303 31902463 -113686825 - Charlie2 DNA MER1_type -2523 259 96 2138 109 0 3 chr10 31902463 31902756 -113686532 + AluSg SINE Alu 2 293 -17 524 265 59 55 chr10 31902756 31902848 -113686440 - Charlie2 DNA MER1_type -2686 96 6 1659 158 4 18 chr10 31903320 31903598 -113685690 - AluJo SINE Alu -20 292 19 299 236 16 94 chr10 31903686 31903813 -113685475 - L1ME4a LINE L1 -27 6094 5978 214 205 0 0 chr10 31905003 31905042 -113684246 - L2 LINE L2 -13 3300 3262 2018 169 22 17 chr10 31905455 31905817 -113683471 + MLT1A1 LTR MaLR 1 364 -1 1828 147 3 18 chr10 31908084 31908393 -113680895 + AluSx SINE Alu 2 306 0 366 302 23 0 chr10 31909407 31909536 -113679752 - MIR SINE MIR -15 247 116 1939 136 35 43 chr10 31909545 31909975 -113679313 + THE1C LTR MaLR 1 363 -12 231 343 10 30 chr10 31909978 31910077 -113679211 - MIR SINE MIR -150 112 16 366 271 10 0 chr10 31910676 31910772 -113678516 - L2 LINE L2 -15 3257 3161 871 166 7 0 chr10 31910979 31911118 -113678170 + AluJb SINE Alu 160 299 -13 510 261 119 30 chr10 31911118 31911421 -113677867 - L2 LINE L2 -425 2889 2560 452 198 0 55 chr10 31911615 31911706 -113677582 + MER58A DNA MER1_type 9 94 -13 2069 113 32 0 chr10 31911777 31912059 -113677229 - AluSx SINE Alu -11 301 11 661 274 68 23 chr10 31912779 31912998 -113676290 + MLT1J2 LTR MaLR 37 265 -185 841 184 12 24 chr10 31913172 31913340 -113675948 - FAM SINE Alu -9 166 1 401 331 13 19 chr10 31913387 31913544 -113675744 + MIR SINE MIR 17 172 -90 273 259 24 12 chr10 31913548 31913633 -113675655 - L2 LINE L2 -3 3310 3225 416 180 36 54 chr10 31913812 31913901 -113675387 - MER96B DNA MER1_type? 0 417 329 1624 191 0 13 chr10 31913901 31914205 -113675083 + AluJo SINE Alu 1 300 -12 416 180 36 54 chr10 31914205 31914226 -113675062 - MER96B DNA MER1_type? -88 329 309 1236 144 156 64 chr10 31914234 31914561 -113674727 - THE1B LTR MaLR -7 357 1 592 138 69 31 chr10 31914561 31914685 -113674603 + MER96B DNA MER1_type? 100 228 -189 317 265 0 4 chr10 31915307 31915552 -113673736 + (TG)n Simple_repeat Simple_repeat 1 243 0 285 260 0 0 chr10 31915569 31915738 -113673550 + (TG)n Simple_repeat Simple_repeat 2 170 0 793 76 168 0 chr10 31916319 31916412 -113672876 - MER85 DNA T2_type 0 139 20 267 31 0 0 chr10 31916412 31916444 -113672844 + (CA)n Simple_repeat Simple_repeat 1 32 0 793 76 168 0 chr10 31916444 31916469 -113672819 - MER85 DNA T2_type -119 20 1 263 219 126 93 chr10 31916622 31916655 -113672633 + MIR SINE MIR 63 93 -169 1080 143 22 0 chr10 31916655 31916837 -113672451 + MER5A DNA MER1_type 1 186 -3 263 219 126 93 chr10 31916837 31916954 -113672334 + MIR SINE MIR 93 218 -44 1941 81 4 4 chr10 31917479 31917737 -113671551 + L1PA7 LINE L1 5891 6148 -6 2093 173 63 19 chr10 31917771 31918181 -113671107 - MSTA LTR MaLR 0 428 1 2511 116 27 36 chr10 31918276 31918343 -113670945 - L1MB3 LINE L1 -2 6181 6115 2250 105 0 0 chr10 31918343 31918628 -113670660 - AluSx SINE Alu -27 285 1 2511 116 27 36 chr10 31918628 31919000 -113670288 - L1MB3 LINE L1 -68 6115 5746 2029 104 22 0 chr10 31919064 31919342 -113669946 + AluSx SINE Alu 21 304 -8 2354 106 3 6 chr10 31919529 31919841 -113669447 + AluSx SINE Alu 1 311 -1 271 101 0 0 chr10 31920260 31920304 -113668984 + Alu SINE Alu 224 259 -43 446 278 23 17 chr10 31921037 31921210 -113668078 + L1MC4 LINE L1 7396 7569 -473 934 202 27 77 chr10 31921248 31921545 -113667743 - MER34 LTR ERV1 0 542 261 926 218 42 54 chr10 31921585 31921694 -113667594 - MER34 LTR ERV1 -284 258 149 2215 129 0 0 chr10 31921694 31921989 -113667299 - AluSx SINE Alu -17 295 1 926 218 42 54 chr10 31921989 31922140 -113667148 - MER34 LTR ERV1 -393 149 1 216 0 0 0 chr10 31922188 31922212 -113667076 + (A)n Simple_repeat Simple_repeat 1 24 0 388 207 82 22 chr10 31922267 31922402 -113666886 + L1MC4 LINE L1 7690 7832 -210 343 204 106 0 chr10 31922463 31922576 -113666712 + L1MC4 LINE L1 7918 8042 0 204 260 0 0 chr10 31923583 31923633 -113665655 + L2 LINE L2 3263 3312 -1 333 174 14 0 chr10 31923991 31924060 -113665228 - MER33 DNA MER1_type -22 302 233 814 173 27 129 chr10 31924100 31924395 -113664893 - MER33 DNA MER1_type -54 270 6 2064 128 0 41 chr10 31924797 31925116 -113664172 + AluSx SINE Alu 1 306 -6 1970 92 81 18 chr10 31925244 31925517 -113663771 + AluSx SINE Alu 1 290 -22 2217 111 3 0 chr10 31926144 31926442 -113662846 + AluSx SINE Alu 1 299 -13 2901 182 26 35 chr10 31926530 31927139 -113662149 + MER6A DNA MER2_type 2 605 0 2141 148 0 0 chr10 31927438 31927743 -113661545 + AluSx SINE Alu 1 305 -7 382 138 100 50 chr10 31927892 31927972 -113661316 + AluS SINE Alu 1 84 -219 1818 166 7 7 chr10 31928008 31928315 -113660973 + AluJo SINE Alu 1 307 -5 202 250 0 42 chr10 31928317 31928365 -113660923 - L2 LINE L2 -250 3022 2977 874 152 14 7 chr10 31929259 31929404 -113659884 - MER5A DNA MER1_type -43 146 1 660 217 12 4 chr10 31929417 31929661 -113659627 + GA-rich Low_complexity Low_complexity 1 246 0 3413 141 58 2 chr10 31929662 31930231 -113659057 - LTR26 LTR ERV1 0 603 3 1100 106 0 11 chr10 31930232 31930412 -113658876 + (GGAA)n Simple_repeat Simple_repeat 1 178 0 180 77 0 0 chr10 31930412 31930438 -113658850 + (GGGA)n Simple_repeat Simple_repeat 3 28 0 434 255 0 0 chr10 31930754 31930848 -113658440 - MER5A DNA MER1_type -87 102 9 254 295 11 32 chr10 31931295 31931390 -113657898 - MER5B DNA MER1_type 0 178 86 783 155 0 0 chr10 31931439 31931555 -113657733 + FLAM_C SINE Alu 12 127 -16 3236 172 45 35 chr10 31931763 31932425 -113656863 - L1MC2 LINE L1 -162 6182 5514 2138 105 16 0 chr10 31932460 31932764 -113656524 - AluSx SINE Alu -3 309 1 1824 137 7 3 chr10 31932860 31933183 -113656105 + AluJo SINE Alu 1 324 0 3508 51 19 19 chr10 31933430 31933897 -113655391 - L1PB1 LINE L1 -1 6150 5684 1712 167 6 26 chr10 31935397 31935708 -113653580 - AluJo SINE Alu -7 305 1 976 229 36 16 chr10 31935757 31936010 -113653278 - MIR SINE MIR -2 260 3 505 150 0 0 chr10 31936147 31936256 -113653032 - AluSg/x SINE Alu 0 310 202 329 26 0 0 chr10 31936256 31936294 -113652994 - AluSp SINE Alu -132 171 134 2225 94 0 0 chr10 31936296 31936593 -113652695 - AluSg SINE Alu -13 297 1 292 283 186 59 chr10 31936598 31936835 -113652453 - L1ME LINE L1 -346 5775 5509 1558 238 145 29 chr10 31937121 31937672 -113651616 - L1ME3A LINE L1 -15 6155 5541 531 239 26 7 chr10 31937682 31937837 -113651451 + L1M4 LINE L1 5188 5345 -801 1967 183 133 38 chr10 31937873 31938348 -113650940 - MLT2B1 LTR ERVL 0 520 1 2190 86 0 19 chr10 31938443 31938758 -113650530 - AluSc SINE Alu 0 309 1 712 237 50 7 chr10 31938758 31939029 -113650259 - L1M3 LINE L1 -740 5440 5161 1981 89 41 17 chr10 31939053 31939345 -113649943 - LTR9B LTR ERV1 -345 299 1 404 211 53 0 chr10 31939346 31939422 -113649866 + Tigger3(Golem) DNA MER2_type 2950 3029 0 294 243 29 58 chr10 31939441 31939544 -113649744 + L2 LINE L2 3171 3270 -43 233 235 0 0 chr10 31939914 31939965 -113649323 + L3 LINE CR1 1088 1138 -439 1116 174 38 9 chr10 31940516 31940728 -113648560 - MER20 DNA MER1_type -1 218 1 883 124 0 0 chr10 31940949 31941078 -113648210 - FLAM_C SINE Alu 0 133 5 352 253 81 90 chr10 31941363 31941761 -113647527 - MLT1J LTR MaLR -16 495 36 1785 167 14 0 chr10 31942245 31942539 -113646749 + AluSx SINE Alu 1 298 -14 1633 143 8 4 chr10 31942540 31942798 -113646490 + AluSx SINE Alu 38 296 -16 242 333 20 20 chr10 31943441 31943543 -113645745 - MER5B DNA MER1_type -41 137 36 216 259 56 0 chr10 31943608 31943662 -113645626 - MIR SINE MIR -65 143 87 240 221 58 19 chr10 31944448 31944552 -113644736 + (CA)n Simple_repeat Simple_repeat 1 108 0 351 237 40 35 chr10 31944727 31944900 -113644388 + (CA)n Simple_repeat Simple_repeat 2 175 0 317 263 71 0 chr10 31945068 31945167 -113644121 - L2 LINE L2 0 3313 3208 933 237 46 62 chr10 31945351 31945505 -113643783 - MER33 DNA MER1_type -2261 324 169 1891 97 0 81 chr10 31945505 31945839 -113643449 + AluSx SINE Alu 1 309 0 933 237 46 62 chr10 31945839 31946008 -113643280 - MER33 DNA MER1_type -2416 169 5 360 0 0 0 chr10 31946240 31946280 -113643008 + (CA)n Simple_repeat Simple_repeat 1 40 0 709 176 0 8 chr10 31946284 31946409 -113642879 + AluSg/x SINE Alu 177 300 -12 183 42 0 0 chr10 31947044 31947068 -113642220 + (A)n Simple_repeat Simple_repeat 1 24 0 327 260 67 19 chr10 31947190 31947294 -113641994 + MIR SINE MIR 75 183 -79 1773 200 67 49 chr10 31947319 31947828 -113641460 - LTR40a LTR ERVL 0 519 2 298 306 64 43 chr10 31947835 31948070 -113641218 - MIR SINE MIR -16 246 7 350 232 0 53 chr10 31948677 31948772 -113640516 - MIR SINE MIR -5 257 168 1780 159 6 16 chr10 31950333 31950648 -113638640 - AluSx SINE Alu 0 312 1 1388 246 82 32 chr10 31950651 31951053 -113638235 - MLT1F LTR MaLR -40 502 81 7246 105 15 8 chr10 31951083 31951209 -113638079 - L1MA3 LINE L1 0 6305 6181 1855 128 20 23 chr10 31951209 31951513 -113637775 - AluSx SINE Alu -9 303 1 7246 105 15 8 chr10 31951513 31952596 -113636692 - L1MA3 LINE L1 -124 6181 5088 228 217 22 0 chr10 31952617 31952663 -113636625 - L1ME4a LINE L1 -88 6033 5987 326 295 71 92 chr10 31952801 31953096 -113636192 - L2 LINE L2 -12 3260 2972 355 288 170 7 chr10 31953192 31953345 -113635943 + MER5A DNA MER1_type 9 186 -3 405 204 14 84 chr10 31953507 31953649 -113635639 + MER104 DNA Tc2 1 132 -48 794 181 20 7 chr10 31954633 31954782 -113634506 - FRAM SINE Alu -16 160 10 1313 261 46 67 chr10 31954962 31955125 -113634163 + MLT1J LTR MaLR 1 166 -345 999 228 119 13 chr10 31955125 31955436 -113633852 + MER2 DNA MER2_type 1 344 0 1313 261 46 67 chr10 31955436 31955794 -113633494 + MLT1J LTR MaLR 166 511 0 320 320 73 8 chr10 31955873 31956018 -113633270 + MIR SINE MIR 12 163 -45 1010 122 32 79 chr10 31956131 31956257 -113633031 - Tigger4(Zombi) DNA MER2_type -3 2728 2612 2104 114 0 3 chr10 31956257 31956554 -113632734 - AluSx SINE Alu -16 296 1 1010 122 32 79 chr10 31956554 31956616 -113632672 - Tigger4(Zombi) DNA MER2_type -119 2612 2549 218 222 0 0 chr10 31956874 31956919 -113632369 + (TA)n Simple_repeat Simple_repeat 2 46 0 936 223 112 66 chr10 31956989 31957425 -113631863 - MLT1C LTR MaLR 0 467 1 2338 72 0 3 chr10 31957625 31957929 -113631359 - AluY SINE Alu -8 303 1 944 154 17 23 chr10 31959105 31959280 -113630008 + FRAM SINE Alu 1 169 -7 384 298 0 19 chr10 31959280 31959384 -113629904 + MER5A DNA MER1_type 60 161 -28 526 217 21 122 chr10 31959423 31959612 -113629676 - MER5B DNA MER1_type -6 172 3 786 178 81 35 chr10 31959621 31959795 -113629493 + MER5A DNA MER1_type 4 185 -4 184 128 26 77 chr10 31959879 31959918 -113629370 - MER5A DNA MER1_type -151 38 2 1626 175 17 0 chr10 31959949 31960241 -113629047 - AluJo SINE Alu -15 297 1 294 29 0 0 chr10 31962796 31962831 -113626457 + (CAG)n Simple_repeat Simple_repeat 2 36 0 1303 159 8 21 chr10 31964500 31964739 -113624549 - AluJb SINE Alu -18 294 59 366 23 0 0 chr10 31964828 31964871 -113624417 + (TCCCC)n Simple_repeat Simple_repeat 1 43 0 2129 92 7 0 chr10 31964872 31965165 -113624123 - AluSx SINE Alu -17 295 1 2686 13 0 0 chr10 31965174 31965477 -113623811 - AluYa5 SINE Alu -8 303 1 229 207 69 17 chr10 31965479 31965537 -113623751 + MER5A DNA MER1_type 129 189 0 539 301 54 6 chr10 31965635 31965801 -113623487 - MER5B DNA MER1_type -2 176 3 365 223 91 66 chr10 31966003 31966124 -113623164 - L1ME4a LINE L1 -4 6117 5994 569 277 20 7 chr10 31966251 31966399 -113622889 - MIR SINE MIR -22 240 91 555 280 127 34 chr10 31966396 31966632 -113622656 - MIR SINE MIR -2 260 3 * 344 311 197 12 chr10 31966705 31967030 -113622258 - L1ME4a LINE L1 -345 5776 5392 1945 123 3 0 chr10 31967365 31967649 -113621639 + AluSx SINE Alu 1 285 -27 273 57 0 0 chr10 31967653 31967688 -113621600 + (TAA)n Simple_repeat Simple_repeat 3 37 0 2129 103 0 19 chr10 31969585 31969896 -113619392 + AluSq SINE Alu 1 305 -8 189 0 0 0 chr10 31971358 31971379 -113617909 + (A)n Simple_repeat Simple_repeat 1 21 0 234 169 34 34 chr10 31971814 31971830 -113617458 + GA-rich Low_complexity Low_complexity 2 17 -43 1743 137 19 19 chr10 31971830 31972137 -113617151 + AluJo SINE Alu 6 312 0 234 169 34 34 chr10 31972137 31972179 -113617109 + GA-rich Low_complexity Low_complexity 16 60 0 220 297 55 11 chr10 31972841 31972932 -113616356 + MIR SINE MIR 117 211 -51 383 321 44 28 chr10 31973165 31973414 -113615874 + MIR SINE MIR 8 260 -2 200 238 48 0 chr10 31973960 31974002 -113615286 - L2 LINE L2 0 3272 3229 228 35 0 0 chr10 31975396 31975425 -113613863 + (TG)n Simple_repeat Simple_repeat 2 30 0 1245 208 202 18 chr10 31977331 31977658 -113611630 + MSTD LTR MaLR 2 388 -8 24 0 0 0 chr10 31978101 31978125 -113611163 + AT_rich Low_complexity Low_complexity 1 24 0 235 204 19 37 chr10 31980147 31980201 -113609087 - L2 LINE L2 -18 3295 3243 1835 158 18 0 chr10 31980233 31980517 -113608771 + AluJo SINE Alu 1 289 -23 2301 93 26 0 chr10 31980520 31980822 -113608466 + AluSg SINE Alu 1 310 0 2197 105 0 7 chr10 31981995 31982291 -113606997 - AluSq SINE Alu -19 294 1 293 200 188 0 chr10 31983226 31983311 -113605977 + L2 LINE L2 3210 3310 -3 1998 159 3 0 chr10 31983457 31983766 -113605522 + AluSx SINE Alu 1 310 -2 295 268 178 38 chr10 31984268 31984481 -113604807 - MIR SINE MIR -2 260 18 404 82 16 0 chr10 31984671 31984732 -113604556 + (CA)n Simple_repeat Simple_repeat 1 62 0 296 190 38 76 chr10 31985712 31985791 -113603497 + MIR3 SINE MIR 110 185 -23 988 258 65 90 chr10 31986405 31986702 -113602586 + L1ME4a LINE L1 5315 5618 -503 1825 160 7 3 chr10 31986702 31987016 -113602272 + AluSx SINE Alu 1 315 0 988 258 65 90 chr10 31987016 31987204 -113602084 + L1ME4a LINE L1 5618 5809 -312 1873 149 21 10 chr10 31987204 31987492 -113601796 + AluSx SINE Alu 1 291 -21 988 258 65 90 chr10 31987492 31987728 -113601560 + L1ME4a LINE L1 5809 6018 -103 436 119 15 0 chr10 31987789 31987856 -113601432 - MER116 DNA Mariner 0 80 13 21 0 0 0 chr10 31987929 31987950 -113601338 + AT_rich Low_complexity Low_complexity 1 21 0 2574 24 7 3 chr10 31988099 31988392 -113600896 - AluY SINE Alu -17 294 1 208 311 0 0 chr10 31991751 31991825 -113597463 + G-rich Low_complexity Low_complexity 3 76 0 270 116 23 0 chr10 31992300 31992343 -113596945 - Alu SINE Alu -258 44 1 2588 65 0 0 chr10 31992584 31992890 -113596398 + AluY SINE Alu 1 306 -5 1611 153 4 8 chr10 31993394 31993649 -113595639 - AluJo SINE Alu -10 302 49 3543 128 40 27 chr10 31993987 31994241 -113595047 - MER7C DNA MER2_type -2426 602 353 2233 129 0 0 chr10 31994241 31994543 -113594745 + AluSq SINE Alu 1 302 -11 3543 128 40 27 chr10 31994543 31994880 -113594408 - MER7C DNA MER2_type -2675 353 3 1635 153 38 29 chr10 31995810 31996087 -113593201 + MER33 DNA MER1_type 1 283 -2302 1735 145 43 18 chr10 31996087 31996369 -113592919 + AluJo SINE Alu 1 289 -23 1635 153 38 29 chr10 31996369 31996405 -113592883 + MER33 DNA MER1_type 283 317 -7 2215 129 7 0 chr10 31997221 31997531 -113591757 - AluSx SINE Alu 0 312 1 3719 138 18 68 chr10 31997645 31998192 -113591096 - L1MA9 LINE L1 0 6312 5816 2493 80 0 3 chr10 31998192 31998504 -113590784 - AluSp SINE Alu -2 311 1 3719 138 18 68 chr10 31998504 31998752 -113590536 - L1MA9 LINE L1 -496 5816 5557 203 88 29 0 chr10 31999270 31999304 -113589984 + (GAA)n Simple_repeat Simple_repeat 2 36 0 303 222 0 0 chr10 32001156 32001237 -113588051 + CT-rich Low_complexity Low_complexity 3 83 0 207 291 0 0 chr10 32001240 32001295 -113587993 + T-rich Low_complexity Low_complexity 2 56 0 248 333 0 0 chr10 32001752 32001827 -113587461 + (TA)n Simple_repeat Simple_repeat 2 76 0 993 166 0 0 chr10 32004267 32004418 -113584870 - AluJ SINE Alu -28 284 134 253 323 136 19 chr10 32005627 32005782 -113583506 + MIR3 SINE MIR 27 199 -9 824 138 8 15 chr10 32006479 32006609 -113582679 - AluJ SINE Alu -173 129 1 2089 120 11 0 chr10 32006659 32006943 -113582345 - AluSp SINE Alu -26 287 1 431 142 123 38 chr10 32007013 32007055 -113582233 + Tigger4(Zombi) DNA MER2_type 1 38 -323 2304 86 0 23 chr10 32007055 32007359 -113581929 - AluY SINE Alu -14 297 1 431 142 123 38 chr10 32007359 32007422 -113581866 + Tigger4(Zombi) DNA MER2_type 38 115 -246 223 263 0 11 chr10 32007777 32007952 -113581336 + (CA)n Simple_repeat Simple_repeat 2 174 0 230 95 24 0 chr10 32008010 32008052 -113581236 + (CA)n Simple_repeat Simple_repeat 2 44 0 259 221 229 0 chr10 32008577 32008699 -113580589 - MIR SINE MIR -3 259 110 363 292 93 25 chr10 32008953 32009114 -113580174 + MIR SINE MIR 28 199 -63 2285 109 3 0 chr10 32009160 32009471 -113579817 + AluSx SINE Alu 1 312 0 2512 120 17 3 chr10 32010432 32010791 -113578497 - THE1B LTR MaLR 0 364 1 1719 102 22 25 chr10 32011525 32011632 -113577656 - L1MA6 LINE L1 -6 6294 6188 2488 105 21 103 chr10 32011632 32011713 -113577575 + MSTC LTR MaLR 1 87 -341 1942 151 3 0 chr10 32011713 32012004 -113577284 - AluSg SINE Alu -18 292 1 2488 105 21 103 chr10 32012004 32012387 -113576901 + MSTC LTR MaLR 87 427 -1 1719 102 22 25 chr10 32012387 32012553 -113576735 - L1MA6 LINE L1 -112 6188 6022 2478 92 0 0 chr10 32012565 32012869 -113576419 - AluSg SINE Alu -6 304 1 1334 218 66 3 chr10 32012960 32013295 -113575993 + L1MA4 LINE L1 5945 6300 0 1779 178 3 0 chr10 32013407 32013700 -113575588 - AluJo SINE Alu -18 294 1 309 303 15 77 chr10 32013734 32013929 -113575359 + MER5A DNA MER1_type 4 186 -3 1493 165 129 0 chr10 32014649 32014921 -113574367 + AluSx SINE Alu 1 307 -5 1044 196 0 0 chr10 32014923 32015086 -113574202 + AluJo/FRAM SINE Alu 137 299 -13 521 130 13 0 chr10 32015223 32015300 -113573988 - AluS SINE Alu -234 79 2 1901 162 55 0 chr10 32015419 32015747 -113573541 - MER7A DNA MER2_type 0 346 3 2327 100 3 7 chr10 32015780 32016089 -113573199 + AluSq SINE Alu 1 308 -5 1245 239 51 20 chr10 32016379 32016769 -113572519 + MER74B LTR ERVL 211 612 -10 1286 144 116 72 chr10 32016989 32017266 -113572022 + AluJo SINE Alu 1 289 -23 1097 130 0 0 chr10 32017357 32017511 -113571777 + AluJb SINE Alu 142 295 -17 192 40 0 0 chr10 32018558 32018583 -113570705 + (TTG)n Simple_repeat Simple_repeat 2 26 0 2196 118 3 0 chr10 32018585 32018874 -113570414 - AluSx SINE Alu -18 294 5 1862 106 99 0 chr10 32019196 32019469 -113569819 + AluSx SINE Alu 1 300 -12 276 81 23 69 chr10 32019780 32019867 -113569421 + (GGGAA)n Simple_repeat Simple_repeat 2 84 0 231 274 68 14 chr10 32020298 32020328 -113568960 + MER5A DNA MER1_type 110 137 -52 1993 120 46 0 chr10 32020328 32020611 -113568677 - AluSg SINE Alu -14 296 1 231 274 68 14 chr10 32020611 32020653 -113568635 + MER5A DNA MER1_type 137 186 -3 350 291 126 22 chr10 32020844 32021026 -113568262 + MIR SINE MIR 23 223 -39 824 68 0 8 chr10 32021321 32021438 -113567850 + (TTCC)n Simple_repeat Simple_repeat 4 119 0 1726 161 10 17 chr10 32022464 32022763 -113566525 - AluJo SINE Alu -15 297 1 2343 91 0 10 chr10 32023703 32024000 -113565288 - AluSx SINE Alu -18 294 1 1143 161 11 0 chr10 32024948 32025128 -113564160 - AluSg/x SINE Alu -10 300 119 3721 174 45 4 chr10 32025129 32025824 -113563464 - L1MB4 LINE L1 -42 6138 5416 200 61 61 0 chr10 32026068 32026101 -113563187 + CT-rich Low_complexity Low_complexity 2 36 0 1977 66 55 0 chr10 32026788 32027045 -113562243 + AluY SINE Alu 35 305 -6 234 259 0 17 chr10 32028945 32029003 -113560285 - MLT1K LTR MaLR 0 588 532 2200 116 7 0 chr10 32029106 32029407 -113559881 - AluSx SINE Alu -9 303 1 21 36 0 0 chr10 32030030 32030058 -113559230 + AT_rich Low_complexity Low_complexity 1 28 0 2128 125 3 16 chr10 32030112 32030245 -113559043 + AluSc SINE Alu 1 134 -175 2384 105 3 6 chr10 32030245 32030559 -113558729 + AluSp SINE Alu 1 313 0 2128 125 3 16 chr10 32030559 32030736 -113558552 + AluSc SINE Alu 134 307 -2 269 233 8 125 chr10 32030872 32030992 -113558296 - MIR SINE MIR -61 147 42 1504 184 53 3 chr10 32031421 32031704 -113557584 + AluJo SINE Alu 1 297 -15 621 206 5 14 chr10 32031704 32031914 -113557374 + GA-rich Low_complexity Low_complexity 1 207 0 1346 222 104 64 chr10 32032009 32032457 -113556831 + MLT2B1 LTR ERVL 1 472 -48 666 85 0 0 chr10 32032457 32032551 -113556737 + (TCTA)n Simple_repeat Simple_repeat 1 94 0 1346 222 104 64 chr10 32032551 32032601 -113556687 + MLT2B1 LTR ERVL 472 519 -1 57 28 0 0 chr10 32033754 32033825 -113555463 + AT_rich Low_complexity Low_complexity 1 71 0 2131 116 14 0 chr10 32034836 32035130 -113554158 + AluSx SINE Alu 1 298 -14 189 365 153 0 chr10 32036279 32036416 -113552872 + L2 LINE L2 3099 3256 -16 310 230 53 0 chr10 32036968 32037069 -113552219 + MIR SINE MIR 103 211 -51 387 200 207 29 chr10 32037808 32037948 -113551340 - MER3 DNA MER1_type 0 209 45 1964 126 9 49 chr10 32038132 32038457 -113550831 + AluSx SINE Alu 1 312 0 408 261 67 39 chr10 32040142 32040322 -113548966 - L2 LINE L2 -9 3304 3120 1973 201 88 36 chr10 32040377 32040898 -113548390 + LTR10A LTR ERV1 1 548 -61 277 45 91 0 chr10 32040954 32040998 -113548290 - MER4B LTR ERV1 0 779 732 2104 87 7 14 chr10 32041007 32041349 -113547939 - AluSx SINE Alu 0 340 1 2962 119 34 12 chr10 32041398 32041792 -113547496 - MER4B LTR ERV1 -31 748 172 2144 108 3 7 chr10 32041792 32042080 -113547208 + AluSg SINE Alu 1 287 -23 2962 119 34 12 chr10 32042080 32042182 -113547106 - MER4B LTR ERV1 -607 172 74 25 0 0 0 chr10 32042182 32042207 -113547081 + AT_rich Low_complexity Low_complexity 1 25 0 968 104 0 0 chr10 32042207 32042332 -113546956 - AluSq/x SINE Alu -187 125 1 597 107 0 0 chr10 32042332 32042416 -113546872 - MER4B LTR ERV1 -526 84 1 2924 150 25 47 chr10 32042782 32042837 -113546451 - L1MB1 LINE L1 -17 6172 6117 2117 128 3 10 chr10 32042837 32043135 -113546153 - AluSx SINE Alu -16 296 1 2924 150 25 47 chr10 32043135 32043379 -113545909 - L1MB1 LINE L1 -72 6117 5888 2810 97 0 0 chr10 32043379 32043741 -113545547 - THE1B LTR MaLR 0 364 3 2924 150 25 47 chr10 32043741 32043999 -113545289 - L1MB1 LINE L1 -301 5888 5626 392 117 17 0 chr10 32044002 32044062 -113545226 + L1MB1 LINE L1 5572 5632 -551 231 61 0 0 chr10 32044278 32044311 -113544977 + (CA)n Simple_repeat Simple_repeat 2 34 0 1341 93 11 6 chr10 32044392 32044574 -113544714 - AluSp SINE Alu -7 306 124 2845 103 23 16 chr10 32044976 32045403 -113543885 + L1PA16 LINE L1 5728 6157 -9 243 0 0 0 chr10 32045447 32045474 -113543814 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 422 264 25 0 chr10 32045608 32045729 -113543559 - MIR SINE MIR -44 218 95 1802 111 115 7 chr10 32046007 32046277 -113543011 - AluSg SINE Alu 0 310 12 1860 138 24 34 chr10 32046805 32047103 -113542185 + AluJo SINE Alu 1 295 -17 2130 108 0 0 chr10 32047196 32047465 -113541823 - AluSx SINE Alu -43 269 1 4213 138 6 2 chr10 32047785 32048417 -113540871 + MER41B LTR ERV1 1 635 0 2276 108 3 0 chr10 32048695 32048991 -113540297 + AluSq SINE Alu 1 297 -16 530 91 0 26 chr10 32051962 32052039 -113537249 - FLAM_A SINE Alu -18 124 50 292 247 70 119 chr10 32052103 32052330 -113536958 - L2 LINE L2 -1 3312 3097 3979 186 18 35 chr10 32052347 32052856 -113536432 + L1MB5 LINE L1 5364 5880 -294 1707 163 0 52 chr10 32052856 32053181 -113536107 + AluJo SINE Alu 1 308 -4 3979 186 18 35 chr10 32053181 32053254 -113536034 + L1MB5 LINE L1 5880 5953 -221 2313 113 0 0 chr10 32053254 32053555 -113535733 + AluSx SINE Alu 1 301 -11 3979 186 18 35 chr10 32053555 32053790 -113535498 + L1MB5 LINE L1 5953 6168 -6 215 283 0 0 chr10 32053826 32053886 -113535402 - L2 LINE L2 -245 3068 3009 2438 84 7 0 chr10 32053933 32054242 -113535046 + AluSx SINE Alu 1 311 -1 2343 91 0 10 chr10 32055211 32055508 -113533780 - AluSx SINE Alu -18 294 1 1143 161 11 0 chr10 32056456 32056636 -113532652 - AluSg/x SINE Alu -10 300 119 3713 177 43 4 chr10 32056637 32057333 -113531955 - L1MB4 LINE L1 -42 6138 5416 200 61 61 0 chr10 32057577 32057610 -113531678 + CT-rich Low_complexity Low_complexity 2 36 0 1977 66 55 0 chr10 32058296 32058553 -113530735 + AluY SINE Alu 35 305 -6 234 259 0 17 chr10 32060452 32060510 -113528778 - MLT1K LTR MaLR 0 588 532 2200 116 7 0 chr10 32060613 32060914 -113528374 - AluSx SINE Alu -9 303 1 21 36 0 0 chr10 32061537 32061565 -113527723 + AT_rich Low_complexity Low_complexity 1 28 0 2116 125 3 22 chr10 32061619 32061752 -113527536 + AluSc SINE Alu 1 135 -174 2399 109 3 0 chr10 32061752 32062064 -113527224 + AluSp SINE Alu 1 313 0 2116 125 3 22 chr10 32062064 32062243 -113527045 + AluSc SINE Alu 135 307 -2 269 233 8 125 chr10 32062379 32062499 -113526789 - MIR SINE MIR -61 147 42 1504 184 53 3 chr10 32062928 32063211 -113526077 + AluJo SINE Alu 1 297 -15 621 206 5 14 chr10 32063211 32063421 -113525867 + GA-rich Low_complexity Low_complexity 1 207 0 1346 222 104 64 chr10 32063516 32063964 -113525324 + MLT2B1 LTR ERVL 1 472 -48 666 85 0 0 chr10 32063964 32064058 -113525230 + (TCTA)n Simple_repeat Simple_repeat 1 94 0 1346 222 104 64 chr10 32064058 32064108 -113525180 + MLT2B1 LTR ERVL 472 519 -1 57 28 0 0 chr10 32065261 32065332 -113523956 + AT_rich Low_complexity Low_complexity 1 71 0 2207 117 13 0 chr10 32066343 32066651 -113522637 + AluSx SINE Alu 1 312 0 180 0 0 0 chr10 32067025 32067045 -113522243 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 2152 109 0 0 chr10 32067046 32067321 -113521967 - AluSc SINE Alu -34 275 1 2056 111 0 33 chr10 32067868 32068174 -113521114 + AluSx SINE Alu 1 296 -16 342 0 0 0 chr10 32068696 32068734 -113520554 + (TG)n Simple_repeat Simple_repeat 2 39 0 2118 131 3 0 chr10 32069442 32069739 -113519549 + AluSx SINE Alu 1 298 -14 273 57 0 0 chr10 32069739 32069774 -113519514 + (GGGGA)n Simple_repeat Simple_repeat 1 35 0 521 184 31 0 chr10 32070607 32070705 -113518583 - FLAM_A SINE Alu 0 142 42 234 0 0 0 chr10 32070897 32070923 -113518365 + (T)n Simple_repeat Simple_repeat 1 26 0 2323 96 0 34 chr10 32070924 32071247 -113518041 + AluSx SINE Alu 1 312 0 356 81 0 16 chr10 32071247 32071309 -113517979 + (TA)n Simple_repeat Simple_repeat 2 62 0 1959 136 3 40 chr10 32073342 32073665 -113515623 + AluSx SINE Alu 1 311 -1 189 365 153 0 chr10 32074797 32074934 -113514354 + L2 LINE L2 3099 3256 -16 310 230 53 0 chr10 32075486 32075587 -113513701 + MIR SINE MIR 103 211 -51 387 200 207 29 chr10 32076326 32076466 -113512822 - MER3 DNA MER1_type 0 209 45 1964 126 9 49 chr10 32076650 32076975 -113512313 + AluSx SINE Alu 1 312 0 408 261 67 39 chr10 32078660 32078840 -113510448 - L2 LINE L2 -9 3304 3120 1973 201 88 36 chr10 32078895 32079416 -113509872 + LTR10A LTR ERV1 1 548 -61 277 45 91 0 chr10 32079472 32079516 -113509772 - MER4B LTR ERV1 0 766 719 2104 87 7 14 chr10 32079525 32079867 -113509421 - AluSx SINE Alu 0 340 1 2962 119 34 12 chr10 32079916 32080310 -113508978 - MER4B LTR ERV1 -31 748 172 2144 108 3 7 chr10 32080310 32080598 -113508690 + AluSg SINE Alu 1 287 -23 2962 119 34 12 chr10 32080598 32080700 -113508588 - MER4B LTR ERV1 -607 172 74 25 0 0 0 chr10 32080700 32080725 -113508563 + AT_rich Low_complexity Low_complexity 1 25 0 968 104 0 0 chr10 32080725 32080850 -113508438 - AluSq/x SINE Alu -188 125 1 597 107 0 0 chr10 32080850 32080934 -113508354 - MER4B LTR ERV1 -526 84 1 1554 124 27 60 chr10 32081303 32081355 -113507933 - L1MB1 LINE L1 -1 6167 6115 2117 128 3 10 chr10 32081355 32081653 -113507635 - AluSx SINE Alu -16 296 1 1554 124 27 60 chr10 32081653 32081897 -113507391 - L1MB1 LINE L1 -53 6115 5881 2810 97 0 0 chr10 32081897 32082259 -113507029 - THE1B LTR MaLR 0 364 3 2924 150 25 47 chr10 32082259 32082517 -113506771 - L1MB1 LINE L1 -382 5807 5626 392 117 17 0 chr10 32082520 32082580 -113506708 + L1MB1 LINE L1 5572 5632 -551 231 61 0 0 chr10 32082796 32082829 -113506459 + (CA)n Simple_repeat Simple_repeat 2 34 0 1341 93 11 6 chr10 32082910 32083092 -113506196 - AluSp SINE Alu -7 306 124 2845 103 23 16 chr10 32083494 32083921 -113505367 + L1PA16 LINE L1 5728 6157 -9 243 0 0 0 chr10 32083965 32083992 -113505296 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 422 264 25 0 chr10 32084126 32084247 -113505041 - MIR SINE MIR -44 218 95 1802 111 115 7 chr10 32084525 32084795 -113504493 - AluSg SINE Alu 0 310 12 1860 138 24 34 chr10 32085323 32085621 -113503667 + AluJo SINE Alu 1 295 -17 2130 108 0 0 chr10 32085714 32085983 -113503305 - AluSx SINE Alu -43 269 1 4213 138 6 2 chr10 32086303 32086935 -113502353 + MER41B LTR ERV1 1 635 0 2276 108 3 0 chr10 32087213 32087509 -113501779 + AluSq SINE Alu 1 297 -16 530 91 0 26 chr10 32090480 32090557 -113498731 - FLAM SINE Alu -18 125 51 292 247 70 119 chr10 32090621 32090848 -113498440 - L2 LINE L2 -1 3312 3097 3979 186 18 35 chr10 32090865 32091374 -113497914 + L1MB5 LINE L1 5364 5880 -294 1707 163 0 52 chr10 32091374 32091699 -113497589 + AluJo SINE Alu 1 308 -4 3979 186 18 35 chr10 32091699 32091772 -113497516 + L1MB5 LINE L1 5880 5953 -221 2313 113 0 0 chr10 32091772 32092073 -113497215 + AluSx SINE Alu 1 301 -11 3979 186 18 35 chr10 32092073 32092308 -113496980 + L1MB5 LINE L1 5953 6168 -6 215 283 0 0 chr10 32092344 32092404 -113496884 - L2 LINE L2 -245 3068 3009 2438 84 7 0 chr10 32092451 32092760 -113496528 + AluSx SINE Alu 1 311 -1 474 205 18 27 chr10 32093466 32093578 -113495710 - FLAM_C SINE Alu -18 125 15 193 342 25 0 chr10 32093584 32093663 -113495625 + MIR SINE MIR 67 147 -61 198 0 0 0 chr10 32094159 32094181 -113495107 + (A)n Simple_repeat Simple_repeat 1 22 0 423 66 40 0 chr10 32094407 32094483 -113494805 + (TAGA)n Simple_repeat Simple_repeat 4 82 0 198 0 0 0 chr10 32095587 32095609 -113493679 + (TG)n Simple_repeat Simple_repeat 1 22 0 2249 102 7 7 chr10 32096318 32096622 -113492666 + AluSq SINE Alu 1 304 -9 894 264 10 5 chr10 32096622 32096830 -113492458 + MER58A DNA MER1_type 4 212 -12 221 400 40 0 chr10 32097288 32097388 -113491900 + L2 LINE L2 3121 3224 -48 337 311 80 50 chr10 32098050 32098288 -113491000 + LTR67 LTR ERVL 23 267 -290 319 301 77 14 chr10 32098381 32098524 -113490764 + LTR67 LTR ERVL 392 543 -14 853 238 159 56 chr10 32098781 32099110 -113490178 + LTR33A LTR ERVL 88 467 -56 2148 116 0 0 chr10 32099110 32099421 -113489867 - AluSx SINE Alu 0 311 1 853 238 159 56 chr10 32099421 32099485 -113489803 + LTR33A LTR ERVL 467 523 0 225 0 0 0 chr10 32099747 32099772 -113489516 + (A)n Simple_repeat Simple_repeat 1 25 0 2118 136 0 0 chr10 32099772 32100066 -113489222 + AluSx SINE Alu 1 294 -18 1124 123 12 6 chr10 32100605 32100775 -113488513 - AluSc SINE Alu -16 293 123 207 170 0 64 chr10 32100799 32100815 -113488473 + CT-rich Low_complexity Low_complexity 5 20 -28 2217 122 36 31 chr10 32100815 32101175 -113488113 + THE1B LTR MaLR 1 362 -2 207 170 0 64 chr10 32101175 32101205 -113488083 + CT-rich Low_complexity Low_complexity 20 48 0 2180 120 108 57 chr10 32101432 32101839 -113487449 - MSTA LTR MaLR 0 428 1 340 268 12 0 chr10 32101928 32102010 -113487278 - MIR SINE MIR -72 136 54 2346 47 0 7 chr10 32102370 32102648 -113486640 + AluY SINE Alu 31 306 -5 181 283 38 47 chr10 32102654 32102760 -113486528 + MIR SINE MIR 133 237 -25 2562 70 0 6 chr10 32102945 32103258 -113486030 - AluY SINE Alu 0 311 1 2241 100 0 39 chr10 32103318 32103627 -113485661 - AluSx SINE Alu -15 297 1 201 83 56 0 chr10 32104029 32104065 -113485223 + (TG)n Simple_repeat Simple_repeat 1 38 0 612 113 10 10 chr10 32104118 32104215 -113485073 + MER4A LTR ERV1 1 97 -567 * 1810 138 156 77 chr10 32104212 32104590 -113484698 + MER4A LTR ERV1 257 664 0 245 320 40 32 chr10 32104812 32104937 -113484351 + L2 LINE L2 3137 3262 -10 292 262 10 48 chr10 32105740 32105843 -113483445 - MER5A DNA MER1_type -2 187 89 24 0 0 0 chr10 32105843 32105867 -113483421 + AT_rich Low_complexity Low_complexity 1 24 0 2184 100 4 0 chr10 32105880 32106159 -113483129 + AluSq SINE Alu 1 280 -33 1495 206 0 34 chr10 32106206 32106498 -113482790 - AluJo SINE Alu -30 282 1 2464 70 0 0 chr10 32107497 32107797 -113481491 + AluSg SINE Alu 1 300 -10 263 306 123 55 chr10 32108163 32108545 -113480743 + L3b LINE CR1 1167 1574 -9 644 285 52 27 chr10 32108568 32108788 -113480500 - MIR SINE MIR 0 262 38 2186 169 49 24 chr10 32108893 32109018 -113480270 - L1MA9 LINE L1 0 6312 6192 2111 142 0 0 chr10 32109018 32109327 -113479961 - AluSx SINE Alu -3 309 1 2186 169 49 24 chr10 32109327 32109667 -113479621 - L1MA9 LINE L1 -120 6192 5835 2546 55 0 3 chr10 32110227 32110539 -113478749 + AluY SINE Alu 1 311 0 2329 109 0 13 chr10 32110898 32111211 -113478077 - AluSc SINE Alu 0 309 1 1262 198 60 14 chr10 32111850 32112133 -113477155 + AluJo SINE Alu 3 298 -14 1896 159 16 13 chr10 32112628 32113040 -113476248 + AluSq SINE Alu 3 415 0 243 88 0 0 chr10 32114557 32114591 -113474697 + (CA)n Simple_repeat Simple_repeat 1 34 0 210 206 27 27 chr10 32114607 32114680 -113474608 + (CA)n Simple_repeat Simple_repeat 1 73 0 23 33 0 0 chr10 32114681 32114711 -113474577 + AT_rich Low_complexity Low_complexity 1 30 0 2298 87 3 0 chr10 32114713 32115001 -113474287 - AluSx SINE Alu -22 290 2 348 314 25 13 chr10 32115033 32115192 -113474096 - MIR SINE MIR -13 249 89 1968 150 0 3 chr10 32115705 32116005 -113473283 + AluJo SINE Alu 5 303 -9 2250 101 0 22 chr10 32116360 32116677 -113472611 - AluSx SINE Alu -2 310 1 1832 140 19 48 chr10 32116678 32116993 -113472295 - AluJo SINE Alu -4 308 3 270 309 0 12 chr10 32117527 32117611 -113471677 - L2 LINE L2 0 3272 3190 2218 123 0 3 chr10 32117867 32118176 -113471112 - AluSx SINE Alu -4 308 1 821 147 8 0 chr10 32119078 32119207 -113470081 - FLAM_C SINE Alu -3 130 1 1925 176 3 0 chr10 32119301 32119603 -113469685 + AluSx SINE Alu 1 303 -9 1034 250 89 0 chr10 32119643 32119891 -113469397 + Charlie1a DNA MER1_type 6 275 -1180 1028 154 12 0 chr10 32119903 32120065 -113469223 + FRAM SINE Alu 4 167 -9 233 132 19 19 chr10 32120070 32120123 -113469165 + Charlie1a DNA MER1_type 279 331 -1124 * 2189 152 140 64 chr10 32120120 32120248 -113469040 + Charlie1a DNA MER1_type 847 964 -1797 1722 123 0 76 chr10 32120248 32120581 -113468707 - AluSx SINE Alu 0 315 6 2189 152 140 64 chr10 32120581 32121017 -113468271 + Charlie1a DNA MER1_type 964 1455 0 776 189 16 53 chr10 32121646 32121777 -113467511 + MER5A DNA MER1_type 6 129 -60 2290 109 0 7 chr10 32121777 32122080 -113467208 - AluSx SINE Alu -11 301 1 776 189 16 53 chr10 32122080 32122138 -113467150 + MER5A DNA MER1_type 129 188 -1 1816 176 3 10 chr10 32123150 32123446 -113465842 + AluJo SINE Alu 1 294 -18 649 242 0 0 chr10 32123683 32123815 -113465473 + FLAM_A SINE Alu 1 132 -1 1157 206 64 103 chr10 32124181 32124371 -113464917 + MLT1B LTR MaLR 14 183 -207 315 0 0 0 chr10 32124371 32124406 -113464882 + (CA)n Simple_repeat Simple_repeat 1 35 0 1157 206 64 103 chr10 32124406 32124603 -113464685 + MLT1B LTR MaLR 183 386 -4 377 236 114 29 chr10 32124630 32124770 -113464518 - LTR67 LTR ERVL 0 557 406 609 241 97 5 chr10 32125675 32125870 -113463418 - HsTC2 DNA Tc2 -12 1886 1674 14880 175 52 21 chr10 32125922 32128901 -113460387 - L1PB1 LINE L1 0 6867 3981 210 37 0 0 chr10 32128901 32128928 -113460360 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 14880 175 52 21 chr10 32128928 32131994 -113457294 - L1PB1 LINE L1 -2886 3981 634 1237 127 5 0 chr10 32131994 32132191 -113457097 - L1PB1 LINE L1 -6663 200 3 1049 254 39 58 chr10 32132193 32132289 -113456999 - HsTC2 DNA Tc2 -277 1621 1525 2387 79 13 0 chr10 32132289 32132594 -113456694 - AluY SINE Alu -2 309 1 1049 254 39 58 chr10 32132594 32132856 -113456432 - HsTC2 DNA Tc2 -373 1525 1270 331 293 41 24 chr10 32132874 32132997 -113456291 - HsTC2 DNA Tc2 -1764 134 10 4364 109 11 11 chr10 32133124 32133736 -113455552 - LTR9 LTR ERV1 0 612 1 2578 138 18 35 chr10 32134180 32134615 -113454673 - MSTA LTR MaLR 0 428 1 819 225 48 66 chr10 32135891 32136110 -113453178 + MLT1E3 LTR MaLR 131 405 -219 2240 124 0 6 chr10 32136110 32136424 -113452864 + AluSx SINE Alu 1 312 0 819 225 48 66 chr10 32136424 32136501 -113452787 + MLT1E3 LTR MaLR 405 482 -142 1735 189 3 6 chr10 32136551 32136864 -113452424 - AluJo SINE Alu 0 312 1 472 264 28 38 chr10 32137045 32137490 -113451798 - L1M LINE L1 -743 5403 4982 734 306 125 72 chr10 32137495 32137610 -113451678 + L2 LINE L2 1824 1931 -1383 605 194 0 62 chr10 32137610 32137739 -113451549 + FLAM_C SINE Alu 2 122 -11 734 306 125 72 chr10 32137739 32137877 -113451411 + L2 LINE L2 1931 2060 -1254 2005 131 46 25 chr10 32137877 32138244 -113451044 + THE1C LTR MaLR 1 375 0 734 306 125 72 chr10 32138244 32138979 -113450309 + L2 LINE L2 2060 2866 -448 616 190 2 9 chr10 32139031 32139151 -113450137 - MLT1C LTR MaLR 0 467 245 3906 107 14 12 chr10 32139181 32139762 -113449526 + L1PA13 LINE L1 5582 6163 0 198 0 0 0 chr10 32140671 32140693 -113448595 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 1016 174 92 128 chr10 32140698 32141002 -113448286 - MER51A LTR ERV1 -82 552 3 180 0 0 0 chr10 32141395 32141415 -113447873 + (T)n Simple_repeat Simple_repeat 1 20 0 2334 103 0 0 chr10 32141726 32142018 -113447270 - AluSx SINE Alu -20 292 1 4536 102 110 107 chr10 32142247 32143640 -113445648 + pTR5 LTR ERV1 79 2438 0 1302 174 97 17 chr10 32143976 32144264 -113445024 - AluJo SINE Alu -1 311 1 2088 110 11 0 chr10 32144418 32144721 -113444567 - AluSq SINE Alu 0 306 1 1577 196 0 18 chr10 32145602 32145882 -113443406 - AluJo SINE Alu -17 295 21 1777 133 36 33 chr10 32145890 32146191 -113443097 - AluJb SINE Alu -10 302 1 5599 202 55 77 chr10 32146193 32146697 -113442591 - L1MC3 LINE L1 -216 7569 7056 288 0 0 0 chr10 32146697 32146729 -113442559 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 2183 108 0 0 chr10 32146734 32147011 -113442277 - AluSg SINE Alu -33 277 1 5599 202 55 77 chr10 32147011 32147576 -113441712 - L1MC3 LINE L1 -733 7052 6476 751 187 0 15 chr10 32147576 32147710 -113441578 - FLAM_C SINE Alu -1 132 1 5599 202 55 77 chr10 32147710 32147899 -113441389 - L1MC3 LINE L1 -1309 6476 6284 2391 65 41 0 chr10 32147899 32148191 -113441097 + AluY SINE Alu 1 304 -7 5599 202 55 77 chr10 32148191 32148531 -113440757 - L1MC3 LINE L1 -1501 6284 5998 28 61 0 0 chr10 32148632 32148681 -113440607 + AT_rich Low_complexity Low_complexity 1 49 0 249 196 0 0 chr10 32149323 32149374 -113439914 + (CA)n Simple_repeat Simple_repeat 1 51 0 2484 80 3 3 chr10 32149395 32149707 -113439581 + AluSx SINE Alu 1 312 0 304 326 23 8 chr10 32149853 32149985 -113439303 + GA-rich Low_complexity Low_complexity 4 137 0 245 121 0 0 chr10 32150071 32150104 -113439184 - tRNA-Gly-GGC tRNA tRNA -41 33 1 2212 102 3 10 chr10 32150205 32150499 -113438789 + AluSq SINE Alu 5 296 -17 945 186 150 5 chr10 32150674 32150894 -113438394 + ORSL DNA AcHobo 24 275 0 23 0 0 0 chr10 32151096 32151119 -113438169 + AT_rich Low_complexity Low_complexity 1 23 0 851 153 0 0 chr10 32151119 32151237 -113438051 - FLAM_C SINE Alu -25 118 1 529 263 109 53 chr10 32151845 32152165 -113437123 + L2 LINE L2 2936 3273 -40 186 71 0 0 chr10 32152174 32152202 -113437086 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 235 239 73 55 chr10 32152276 32152385 -113436903 - MIR3 SINE MIR -8 200 90 314 304 26 0 chr10 32152757 32152872 -113436416 - MIR SINE MIR -111 151 34 378 74 0 0 chr10 32153084 32153138 -113436150 + (TG)n Simple_repeat Simple_repeat 2 55 0 1386 175 91 82 chr10 32153162 32153203 -113436085 - L1MC5 LINE L1 -48 7913 7874 1593 180 4 11 chr10 32153203 32153506 -113435782 + AluJb SINE Alu 7 307 0 1386 175 91 82 chr10 32153506 32153960 -113435328 - L1MC5 LINE L1 -87 7874 7413 277 224 0 0 chr10 32153958 32154016 -113435272 - L1MC4a LINE L1 -1884 5924 5867 * 1732 121 8 88 chr10 32154101 32154363 -113434925 - L1MA4 LINE L1 -3 6297 6070 1495 195 17 28 chr10 32154363 32154650 -113434638 - AluJo SINE Alu -15 297 14 1732 121 8 88 chr10 32154650 32154750 -113434538 - L1MA4 LINE L1 -230 6070 5964 623 254 90 92 chr10 32154811 32155147 -113434141 - L1MC4a LINE L1 -2058 5750 5414 840 130 0 8 chr10 32155147 32155270 -113434018 - FLAM_C SINE Alu -11 122 1 623 254 90 92 chr10 32155270 32155389 -113433899 - L1MC4a LINE L1 -2394 5414 5296 2211 105 0 30 chr10 32155547 32155851 -113433437 + AluSx SINE Alu 1 295 -17 352 342 80 13 chr10 32155946 32156171 -113433117 - MLT1I LTR MaLR -7 402 163 293 256 28 3 chr10 32156168 32156268 -113433020 - MLT1I LTR MaLR -270 139 38 * 751 160 0 8 chr10 32157163 32157288 -113432000 + AluJo SINE Alu 11 134 -178 2344 103 0 0 chr10 32157594 32157894 -113431394 + AluSx SINE Alu 1 300 -12 513 326 6 6 chr10 32158233 32158408 -113430880 + MLT1I LTR MaLR 232 406 -3 1117 234 191 37 chr10 32158809 32159129 -113430159 + HAL1 LINE L1 454 870 -1637 2127 103 3 23 chr10 32159129 32159430 -113429858 - AluSx SINE Alu -17 295 1 1117 234 191 37 chr10 32159430 32159574 -113429714 + HAL1 LINE L1 870 990 -1517 32 75 0 0 chr10 32159584 32159651 -113429637 + AT_rich Low_complexity Low_complexity 1 67 0 228 200 0 0 chr10 32160412 32160467 -113428821 + (CA)n Simple_repeat Simple_repeat 2 56 0 380 223 195 8 chr10 32160658 32160821 -113428467 + L1ME LINE L1 5470 5659 -511 2491 58 0 39 chr10 32160829 32161138 -113428150 + AluY SINE Alu 1 297 -14 846 177 19 13 chr10 32161141 32161299 -113427989 + AluJo/FRAM SINE Alu 138 296 -16 198 0 0 0 chr10 32161367 32161389 -113427899 + (A)n Simple_repeat Simple_repeat 1 22 0 279 79 0 0 chr10 32163097 32163135 -113426153 + (TG)n Simple_repeat Simple_repeat 2 39 0 726 184 0 22 chr10 32163770 32163906 -113425382 + FLAM_A SINE Alu 1 133 0 239 93 23 0 chr10 32163907 32163950 -113425338 + (GGAA)n Simple_repeat Simple_repeat 4 47 0 1708 133 0 16 chr10 32164634 32164890 -113424398 + AluSx SINE Alu 1 252 -60 183 42 0 0 chr10 32164906 32164930 -113424358 + (CAA)n Simple_repeat Simple_repeat 1 24 0 1107 161 0 11 chr10 32165303 32165483 -113423805 - FRAM SINE Alu -5 171 1 738 230 48 0 chr10 32165769 32165989 -113423299 - MIR SINE MIR -3 259 31 448 308 11 38 chr10 32166694 32166879 -113422409 + MIR SINE MIR 11 190 -72 308 308 5 43 chr10 32168153 32168364 -113420924 - MER63 DNA MER1_type -7 1681 1 423 144 62 12 chr10 32169413 32169573 -113419715 + (TAGA)n Simple_repeat Simple_repeat 2 169 0 2994 97 0 19 chr10 32169576 32169959 -113419329 - MER57B LTR ERV1 -27 407 31 5070 148 44 35 chr10 32169959 32170904 -113418384 + LTR13 LTR ERVK 1 954 0 2994 97 0 19 chr10 32170904 32170934 -113418354 - MER57B LTR ERV1 -403 31 2 635 46 11 0 chr10 32170934 32171021 -113418267 + (TAGA)n Simple_repeat Simple_repeat 2 89 0 859 271 173 46 chr10 32171083 32171265 -113418023 + MLT1L LTR MaLR 5 162 -453 1976 115 56 7 chr10 32171265 32171553 -113417735 - AluSx SINE Alu -10 302 1 859 271 173 46 chr10 32171553 32171872 -113417416 + MLT1L LTR MaLR 162 570 -45 964 194 106 13 chr10 32171883 32172110 -113417178 - L1MB8 LINE L1 -5 6173 5926 1992 149 10 0 chr10 32172110 32172406 -113416882 - AluSx SINE Alu -13 299 1 779 163 0 0 chr10 32172408 32172543 -113416745 - L1MB8 LINE L1 -352 5822 5688 14773 127 20 15 chr10 32172543 32174734 -113414554 + Tigger1 DNA MER2_type 1 2179 -239 1904 145 10 0 chr10 32174734 32175023 -113414265 - AluSx SINE Alu -18 294 3 14773 127 20 15 chr10 32175023 32175040 -113414248 + Tigger1 DNA MER2_type 2179 2194 -224 1637 88 0 4 chr10 32175040 32175266 -113414022 - L1PB1 LINE L1 0 6151 5927 14773 127 20 15 chr10 32175266 32175359 -113413929 + Tigger1 DNA MER2_type 2194 2315 -103 572 247 54 11 chr10 32175360 32175546 -113413742 - L1MB8 LINE L1 -692 5492 5299 * 6094 114 8 3 chr10 32175522 32176419 -113412869 - L1PA15 LINE L1 -1 6164 5264 1148 158 5 0 chr10 32176408 32176610 -113412678 + L1PA15 LINE L1 5080 5282 -864 * 642 131 56 9 chr10 32176610 32176717 -113412571 + Tigger1 DNA MER2_type 2307 2418 0 305 240 0 1 chr10 32176717 32176798 -113412490 - L1M4 LINE L1 -485 5689 5610 341 293 149 24 chr10 32177006 32177255 -113412033 - LTR50 LTR ERVL -112 683 404 278 278 49 52 chr10 32177600 32177761 -113411527 - LTR50 LTR ERVL -308 215 59 382 287 41 33 chr10 32177779 32177980 -113411308 + MIR SINE MIR 12 212 -50 1520 183 38 14 chr10 32178603 32178892 -113410396 + AluJo SINE Alu 1 296 -16 260 333 58 17 chr10 32179806 32179926 -113409362 + HAL1 LINE L1 8 132 -2375 626 311 56 16 chr10 32180193 32180515 -113408773 - L1MC4a LINE L1 -1881 5927 5593 587 251 51 53 chr10 32180509 32181042 -113408246 - L1MC4 LINE L1 -109 7933 7292 * 343 302 95 42 chr10 32181088 32181353 -113407935 - L1MC4a LINE L1 -515 5606 5336 420 280 85 0 chr10 32181406 32181524 -113407764 - MLT1J2 LTR MaLR -72 378 251 27 0 0 0 chr10 32181874 32181901 -113407387 + AT_rich Low_complexity Low_complexity 1 27 0 195 222 0 0 chr10 32181985 32182030 -113407258 + (CATATA)n Simple_repeat Simple_repeat 2 46 0 410 354 58 23 chr10 32182050 32182395 -113406893 - L1MC4a LINE L1 -1007 5139 4783 2461 74 0 0 chr10 32182625 32182921 -113406367 - AluY SINE Alu -15 296 1 800 273 27 33 chr10 32183345 32183675 -113405613 + L1MEc LINE L1 1552 1879 -4517 1668 156 0 76 chr10 32183678 32183816 -113405472 + AluJo SINE Alu 9 111 -201 1970 147 0 22 chr10 32183816 32184129 -113405159 + AluSx SINE Alu 1 306 -6 1668 156 0 76 chr10 32184129 32184304 -113404984 + AluJo SINE Alu 111 298 -14 781 156 0 43 chr10 32184313 32184434 -113404854 + AluJo SINE Alu 2 118 -194 270 0 0 0 chr10 32184434 32184464 -113404824 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 781 156 0 43 chr10 32184464 32184483 -113404805 + AluJo SINE Alu 118 136 -176 314 368 39 15 chr10 32184484 32184688 -113404600 + L1MEc LINE L1 1883 2091 -4305 326 306 90 37 chr10 32184741 32185057 -113404231 + MLT1I LTR MaLR 80 386 -23 349 273 0 23 chr10 32185165 32185253 -113404035 + L2 LINE L2 3146 3231 -41 3004 177 26 3 chr10 32185253 32185818 -113403470 + L1PA16 LINE L1 5588 6165 -1 417 39 0 0 chr10 32186478 32186529 -113402759 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 325 158 0 0 chr10 32187852 32187909 -113401379 - MIR SINE MIR -21 241 185 204 143 0 0 chr10 32187924 32187966 -113401322 + MIR SINE MIR 170 211 -51 326 281 22 82 chr10 32188183 32188318 -113400970 - MER5B DNA MER1_type 0 178 52 192 111 0 0 chr10 32188321 32188357 -113400931 + (TC)n Simple_repeat Simple_repeat 1 36 0 228 67 0 0 chr10 32188370 32188400 -113400888 + (TG)n Simple_repeat Simple_repeat 2 31 0 2212 126 3 3 chr10 32189269 32189578 -113399710 + AluSx SINE Alu 1 309 -3 1109 301 83 23 chr10 32189858 32190082 -113399206 + LTR67 LTR ERVL 40 249 -308 3167 189 12 67 chr10 32190082 32190813 -113398475 - LTR8 LTR ERV1 0 691 1 1109 301 83 23 chr10 32190813 32191069 -113398219 + LTR67 LTR ERVL 249 549 -8 263 288 119 69 chr10 32191233 32191393 -113397895 + MLT1K LTR MaLR 53 220 -368 434 304 119 22 chr10 32191443 32191670 -113397618 + MLT1K LTR MaLR 332 580 -8 2055 141 0 0 chr10 32191804 32192103 -113397185 + AluSx SINE Alu 4 302 -10 201 336 62 9 chr10 32192116 32192229 -113397059 - L2 LINE L2 -8 3305 3187 2642 171 2 2 chr10 32192348 32192776 -113396512 - MSTA LTR MaLR 0 428 1 1850 147 7 0 chr10 32193991 32194264 -113395024 + AluSx SINE Alu 5 279 -33 234 0 0 0 chr10 32194264 32194290 -113394998 + (CA)n Simple_repeat Simple_repeat 1 26 0 466 244 56 111 chr10 32194312 32194546 -113394742 + MLT1F1 LTR MaLR 1 221 -372 921 217 102 86 chr10 32194617 32194999 -113394289 + MLT1F1 LTR MaLR 180 567 0 446 215 132 57 chr10 32196083 32196311 -113392977 + L1MC4a LINE L1 6058 6302 -1506 789 188 0 0 chr10 32196378 32196511 -113392777 - FLAM_C SINE Alu 0 133 1 1144 235 132 41 chr10 32196622 32197060 -113392228 + MLT2B1 LTR ERVL 3 480 -40 314 162 38 0 chr10 32197071 32197144 -113392144 + (TA)n Simple_repeat Simple_repeat 1 81 -28 1819 159 0 0 chr10 32197144 32197420 -113391868 - AluSx SINE Alu -18 294 19 314 162 38 0 chr10 32197420 32197451 -113391837 + (TA)n Simple_repeat Simple_repeat 81 109 0 293 116 0 0 chr10 32197459 32197509 -113391779 + MLT2C1 LTR ERVL 350 390 -7 858 229 102 32 chr10 32197514 32197697 -113391591 + L1MC4a LINE L1 6411 6580 -1341 2298 103 0 0 chr10 32197697 32197998 -113391290 + AluSg SINE Alu 1 301 -9 858 229 102 32 chr10 32197998 32198212 -113391076 + L1MC4a LINE L1 6580 6928 -993 297 0 0 0 chr10 32198212 32198245 -113391043 + (GA)n Simple_repeat Simple_repeat 1 33 0 907 294 36 29 chr10 32198245 32198656 -113390632 + L1MC4 LINE L1 7082 7495 -547 495 288 115 56 chr10 32198640 32198951 -113390337 + L1MC4 LINE L1 7311 7602 -440 * 2183 128 0 3 chr10 32198951 32199256 -113390032 - AluSx SINE Alu -8 304 1 495 288 115 56 chr10 32199256 32199434 -113389854 + L1MC4 LINE L1 7602 7935 -107 330 98 0 0 chr10 32199454 32199505 -113389783 + (GA)n Simple_repeat Simple_repeat 1 51 0 243 209 173 36 chr10 32199528 32199638 -113389650 + L1MC4 LINE L1 7918 8042 0 826 120 0 0 chr10 32201066 32201191 -113388097 - AluSc SINE Alu -6 303 179 293 299 58 29 chr10 32201666 32201840 -113387448 - MIR SINE MIR -37 225 47 1559 169 47 30 chr10 32201844 32201954 -113387334 + AluJo SINE Alu 1 108 -204 234 0 0 0 chr10 32201954 32201980 -113387308 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 1559 169 47 30 chr10 32201980 32202170 -113387118 + AluJo SINE Alu 108 306 -6 2024 93 82 0 chr10 32202185 32202464 -113386824 + AluSp SINE Alu 5 306 -7 336 290 57 91 chr10 32203175 32203345 -113385943 + L2 LINE L2 2817 2991 -281 2438 119 50 45 chr10 32203345 32203396 -113385892 + MSTB LTR MaLR 5 54 -372 2418 100 0 3 chr10 32203396 32203707 -113385581 + AluSx SINE Alu 1 310 -2 2438 119 50 45 chr10 32203707 32204075 -113385213 + MSTB LTR MaLR 54 426 0 336 290 57 91 chr10 32204075 32204376 -113384912 + L2 LINE L2 2991 3272 0 2058 102 7 4 chr10 32204482 32204756 -113384532 + AluSq SINE Alu 29 303 -10 26 0 0 0 chr10 32205472 32205498 -113383790 + AT_rich Low_complexity Low_complexity 1 26 0 2156 115 0 3 chr10 32205498 32205785 -113383503 - AluSx SINE Alu -26 286 1 1747 171 4 11 chr10 32206046 32206360 -113382928 + AluJo SINE Alu 5 316 0 2344 103 3 0 chr10 32206463 32206765 -113382523 + AluSx SINE Alu 1 303 -9 365 175 165 10 chr10 32207575 32207672 -113381616 + MLT1L LTR MaLR 491 602 -13 1863 135 17 7 chr10 32207871 32208159 -113381129 - AluJo SINE Alu -16 296 6 442 246 116 113 chr10 32209857 32210118 -113379170 - MLT1J1 LTR MaLR 0 446 182 2351 99 0 0 chr10 32210118 32210421 -113378867 - AluSc SINE Alu -6 303 1 442 246 116 113 chr10 32210421 32210521 -113378767 - MLT1J1 LTR MaLR -264 182 84 2808 173 27 60 chr10 32210521 32211153 -113378135 + LTR36 LTR ERV1 1 611 0 2055 116 0 4 chr10 32211678 32211955 -113377333 - AluSx SINE Alu -36 276 1 1044 172 23 0 chr10 32212175 32212349 -113376939 + MSTB LTR MaLR 2 179 -247 671 169 25 0 chr10 32212338 32212456 -113376832 + MSTB LTR MaLR 312 432 0 * 1929 268 117 50 chr10 32213049 32213761 -113375527 + L1MEd LINE L1 157 820 -5490 1256 210 15 96 chr10 32213761 32213990 -113375298 + AluJo SINE Alu 1 196 -116 1821 159 0 46 chr10 32213990 32214317 -113374971 + AluJb SINE Alu 1 312 0 1256 210 15 96 chr10 32214317 32214421 -113374867 + AluJo SINE Alu 196 307 -5 1929 268 117 50 chr10 32214421 32214554 -113374734 + L1MEd LINE L1 820 943 -5367 1135 177 39 9 chr10 32214554 32214786 -113374502 + L1MB5 LINE L1 5928 6166 -8 1929 268 117 50 chr10 32214786 32215210 -113374078 + L1MEd LINE L1 943 1570 -4740 2360 106 3 0 chr10 32215210 32215511 -113373777 + AluSx SINE Alu 1 302 -10 2187 110 3 7 chr10 32215878 32216179 -113373109 + AluSx SINE Alu 10 309 -3 21 36 0 0 chr10 32216463 32216491 -113372797 + AT_rich Low_complexity Low_complexity 1 28 0 406 253 180 16 chr10 32216690 32216884 -113372404 + L1ME4a LINE L1 5547 5772 -349 473 228 39 8 chr10 32216931 32217058 -113372230 - MIR SINE MIR -10 252 122 210 319 9 71 chr10 32217104 32217217 -113372071 - MIR SINE MIR -128 134 29 231 227 176 25 chr10 32217406 32217525 -113371763 + L1ME4a LINE L1 5984 6120 -1 1252 157 32 101 chr10 32217620 32217806 -113371482 + L1MA9 LINE L1 5998 6152 -160 1954 162 0 0 chr10 32217806 32218109 -113371179 + AluJb SINE Alu 2 304 -8 1252 157 32 101 chr10 32218109 32218260 -113371028 + L1MA9 LINE L1 6152 6312 0 21 26 0 26 chr10 32218260 32218272 -113371016 + AT_rich Low_complexity Low_complexity 1 12 -26 1867 145 3 26 chr10 32218272 32218583 -113370705 - AluJb SINE Alu -8 304 1 21 26 0 26 chr10 32218583 32218609 -113370679 + AT_rich Low_complexity Low_complexity 12 38 0 221 250 0 18 chr10 32218917 32218973 -113370315 - L2 LINE L2 -1 3271 3217 692 127 71 16 chr10 32219721 32219847 -113369441 + FLAM_C SINE Alu 1 133 0 904 211 6 6 chr10 32219989 32220164 -113369124 - AluSg/x SINE Alu -17 295 121 835 128 0 48 chr10 32220169 32220178 -113369110 + (GAAA)n Simple_repeat Simple_repeat 2 10 -170 2251 139 0 0 chr10 32220178 32220488 -113368800 + AluSx SINE Alu 1 310 -2 835 128 0 48 chr10 32220488 32220666 -113368622 + (GAAA)n Simple_repeat Simple_repeat 10 180 0 227 270 48 0 chr10 32221490 32221553 -113367735 + MIR3 SINE MIR 122 187 -21 403 235 61 0 chr10 32221650 32221748 -113367540 + MIR SINE MIR 38 141 -67 2263 102 3 0 chr10 32221761 32222056 -113367232 + AluSx SINE Alu 1 296 -16 281 169 0 70 chr10 32222086 32222157 -113367131 + FLAM SINE Alu 68 133 0 595 269 75 11 chr10 32222173 32222455 -113366833 + L1MC4a LINE L1 4360 4659 -1487 1327 148 51 5 chr10 32222470 32222686 -113366602 + AluSg/x SINE Alu 84 309 -3 257 298 26 0 chr10 32222874 32222988 -113366300 + L1P LINE L1 4885 5001 -1145 1856 140 32 4 chr10 32223001 32223280 -113366008 - AluSx SINE Alu -25 287 1 38 22 0 0 chr10 32223402 32223447 -113365841 + AT_rich Low_complexity Low_complexity 1 45 0 926 242 108 71 chr10 32223517 32223754 -113365534 + L1MC4a LINE L1 5254 5481 -2327 2017 130 6 32 chr10 32223754 32224070 -113365218 + AluSx SINE Alu 1 308 -4 926 242 108 71 chr10 32224070 32224435 -113364853 + L1MC4a LINE L1 5481 5878 -1930 1038 153 0 19 chr10 32224652 32224841 -113364447 + AluSg/x SINE Alu 128 313 0 1582 164 20 27 chr10 32225168 32225461 -113363827 + AluJb SINE Alu 1 291 -21 518 236 154 50 chr10 32225819 32225941 -113363347 + MER5C DNA MER1_type 39 147 -177 2137 112 0 7 chr10 32225941 32226249 -113363039 - AluSx SINE Alu 0 306 1 518 236 154 50 chr10 32226249 32226384 -113362904 + MER5C DNA MER1_type 147 324 0 1421 135 42 75 chr10 32226431 32226645 -113362643 + MER33 DNA MER1_type 1 202 -2383 832 161 0 7 chr10 32226645 32226794 -113362494 + L1MB3 LINE L1 6033 6180 -3 1421 135 42 75 chr10 32226794 32226912 -113362376 + MER33 DNA MER1_type 202 322 -2 230 81 27 0 chr10 32227100 32227137 -113362151 + (TG)n Simple_repeat Simple_repeat 1 38 0 2011 142 137 11 chr10 32227435 32227815 -113361473 + MSTA LTR MaLR 1 428 0 669 128 10 0 chr10 32228037 32228139 -113361149 + AluJb SINE Alu 5 107 -205 201 74 0 0 chr10 32228139 32228166 -113361122 + (GA)n Simple_repeat Simple_repeat 2 28 0 249 62 0 0 chr10 32228170 32228202 -113361086 + (GGGAA)n Simple_repeat Simple_repeat 3 34 0 528 124 35 18 chr10 32228202 32228315 -113360973 + GA-rich Low_complexity Low_complexity 3 117 0 215 267 126 44 chr10 32228329 32228464 -113360824 - L2 LINE L2 -191 3081 2936 291 209 45 27 chr10 32228477 32228587 -113360701 + L1MEd LINE L1 14 125 -5994 2003 129 17 0 chr10 32228722 32229009 -113360279 - AluSx SINE Alu -13 299 8 1340 225 40 67 chr10 32229009 32229413 -113359875 + MLT2C2 LTR ERVL 3 394 -70 411 21 0 0 chr10 32229413 32229461 -113359827 + (CA)n Simple_repeat Simple_repeat 2 49 0 1340 225 40 67 chr10 32229461 32229531 -113359757 + MLT2C2 LTR ERVL 394 464 0 311 290 97 0 chr10 32229699 32229792 -113359496 + L1MEd LINE L1 433 534 -5585 24 32 0 0 chr10 32229805 32229836 -113359452 + AT_rich Low_complexity Low_complexity 1 31 0 1346 243 34 42 chr10 32229841 32229976 -113359312 - L1ME1 LINE L1 -19 6942 6807 1838 176 7 10 chr10 32229976 32230278 -113359010 - AluJb SINE Alu -11 301 1 1346 243 34 42 chr10 32230278 32230590 -113358698 - L1ME1 LINE L1 -154 6807 6499 5440 219 100 36 chr10 32230591 32232355 -113356933 - L1ME1 LINE L1 -894 6047 4171 467 160 14 1 chr10 32232382 32232464 -113356824 + MLT1A1 LTR MaLR 241 463 -42 2292 124 0 0 chr10 32232495 32232801 -113356487 - AluSx SINE Alu -6 306 1 269 228 79 10 chr10 32232802 32232903 -113356385 - L1ME1 LINE L1 -2845 4096 3989 1882 241 94 29 chr10 32232938 32233453 -113355835 - L1ME1 LINE L1 -4821 2120 1640 2058 147 3 0 chr10 32233453 32233759 -113355529 - AluSx SINE Alu -5 307 1 1882 241 94 29 chr10 32233759 32234186 -113355102 - L1ME1 LINE L1 -5301 1640 1242 2074 138 3 0 chr10 32234186 32234477 -113354811 + AluSx SINE Alu 1 292 -20 1882 241 94 29 chr10 32234477 32234739 -113354549 - L1ME1 LINE L1 -5699 1242 844 427 252 93 81 chr10 32234945 32235191 -113354097 - L1ME1 LINE L1 -5900 523 275 1518 211 0 16 chr10 32235191 32235499 -113353789 - AluJo SINE Alu -9 303 1 456 99 0 0 chr10 32235509 32235580 -113353708 + (TA)n Simple_repeat Simple_repeat 2 72 0 294 94 0 57 chr10 32235585 32235638 -113353650 - FLAM SINE Alu -1 132 83 317 309 34 28 chr10 32235699 32235877 -113353411 - L1ME1 LINE L1 -6221 202 24 * 810 209 34 28 chr10 32235865 32236042 -113353246 - L1ME LINE L1 -522 5642 5465 * 4285 198 46 53 chr10 32236039 32238321 -113350967 - L1MB4 LINE L1 -192 5988 3730 384 272 45 24 chr10 32238426 32238627 -113350661 + L1MEd LINE L1 1074 1311 -4862 2255 119 3 0 chr10 32238645 32238948 -113350340 + AluSx SINE Alu 1 304 -8 226 327 53 20 chr10 32239098 32239248 -113350040 + L1MEd LINE L1 1470 1624 -4686 459 0 0 0 chr10 32239254 32239305 -113349983 + (TA)n Simple_repeat Simple_repeat 2 52 0 412 73 0 0 chr10 32239305 32239360 -113349928 - Alu SINE Alu -9 303 249 1893 164 22 16 chr10 32239475 32239841 -113349447 + L1 LINE L1 3958 4325 -1821 2237 81 7 17 chr10 32239845 32240180 -113349108 - AluSx SINE Alu 0 312 1 2318 94 16 0 chr10 32240285 32240592 -113348696 - AluSx SINE Alu 0 312 1 229 135 0 0 chr10 32240664 32240701 -113348587 + L1P LINE L1 5214 5250 -896 2087 127 0 0 chr10 32241324 32241607 -113347681 - AluSx SINE Alu -29 283 1 4316 103 111 107 chr10 32241837 32243229 -113346059 + pTR5 LTR ERV1 79 2438 0 1291 174 97 17 chr10 32243565 32243853 -113345435 - AluJo SINE Alu -1 311 1 2068 110 11 0 chr10 32244007 32244310 -113344978 - AluSq SINE Alu 0 306 1 1566 196 0 18 chr10 32245191 32245471 -113343817 - AluJo SINE Alu -17 295 21 1769 133 36 33 chr10 32245479 32245781 -113343507 - AluJb SINE Alu -9 303 1 5726 201 53 78 chr10 32245783 32246287 -113343001 - L1MC3 LINE L1 -216 7569 7054 288 0 0 0 chr10 32246287 32246319 -113342969 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 2161 108 0 0 chr10 32246324 32246601 -113342687 - AluSg SINE Alu -33 277 1 5726 201 53 78 chr10 32246601 32247170 -113342118 - L1MC3 LINE L1 -735 7050 6469 803 182 0 15 chr10 32247170 32247302 -113341986 - FLAM_C SINE Alu -3 130 1 5726 201 53 78 chr10 32247302 32247491 -113341797 - L1MC3 LINE L1 -1316 6469 6277 2350 61 41 3 chr10 32247491 32247784 -113341504 + AluY SINE Alu 1 304 -7 5726 201 53 78 chr10 32247784 32248124 -113341164 - L1MC3 LINE L1 -1508 6277 5998 28 61 0 0 chr10 32248225 32248274 -113341014 + AT_rich Low_complexity Low_complexity 1 49 0 249 196 0 0 chr10 32248916 32248967 -113340321 + (CA)n Simple_repeat Simple_repeat 1 51 0 2462 80 3 3 chr10 32248988 32249300 -113339988 + AluSx SINE Alu 1 312 0 304 326 23 8 chr10 32249446 32249578 -113339710 + GA-rich Low_complexity Low_complexity 4 137 0 244 121 0 0 chr10 32249664 32249697 -113339591 - tRNA-Gly-GGC tRNA tRNA -41 33 1 2199 102 3 10 chr10 32249798 32250092 -113339196 + AluSq SINE Alu 5 296 -17 958 186 150 5 chr10 32250267 32250487 -113338801 + ORSL DNA AcHobo 24 275 0 23 0 0 0 chr10 32250689 32250712 -113338576 + AT_rich Low_complexity Low_complexity 1 23 0 840 153 0 0 chr10 32250712 32250830 -113338458 - FLAM_C SINE Alu -25 118 1 624 263 109 53 chr10 32251438 32251758 -113337530 + L2 LINE L2 2936 3273 -40 186 71 0 0 chr10 32251767 32251795 -113337493 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 268 239 73 55 chr10 32251869 32251978 -113337310 - MIR3 SINE MIR -8 200 90 357 339 26 2 chr10 32252292 32252489 -113336799 - MIR SINE MIR -13 249 8 378 74 0 0 chr10 32252677 32252731 -113336557 + (TG)n Simple_repeat Simple_repeat 2 55 0 1355 179 93 83 chr10 32252755 32252796 -113336492 - L1MC5 LINE L1 -48 7913 7874 1589 176 4 11 chr10 32252796 32253099 -113336189 + AluJb SINE Alu 7 307 0 1355 179 93 83 chr10 32253099 32253552 -113335736 - L1MC5 LINE L1 -87 7874 7413 282 224 0 0 chr10 32253550 32253608 -113335680 - L1MC5 LINE L1 -1884 5924 5867 * 1824 116 14 94 chr10 32253693 32253955 -113335333 - L1MA4 LINE L1 -3 6297 6070 1491 195 17 28 chr10 32253955 32254242 -113335046 - AluJo SINE Alu -15 297 14 1824 116 14 94 chr10 32254242 32254342 -113334946 - L1MA4 LINE L1 -230 6070 5964 655 254 90 92 chr10 32254403 32254739 -113334549 - L1MC5 LINE L1 -2058 5750 5414 896 130 0 8 chr10 32254739 32254862 -113334426 - FLAM_C SINE Alu -11 122 1 655 254 90 92 chr10 32254862 32254981 -113334307 - L1MC5 LINE L1 -2394 5414 5296 2196 105 0 30 chr10 32255139 32255443 -113333845 + AluSx SINE Alu 1 295 -17 347 342 80 13 chr10 32255538 32255763 -113333525 - MLT1I LTR MaLR -7 402 163 290 256 28 3 chr10 32255760 32255860 -113333428 - MLT1I LTR MaLR -270 139 38 * 198 0 0 0 chr10 32257152 32257174 -113332114 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 1010 173 128 53 chr10 32257179 32257483 -113331805 - MER51A LTR ERV1 -82 552 3 189 0 0 0 chr10 32257875 32257896 -113331392 + (T)n Simple_repeat Simple_repeat 1 21 0 189 0 0 0 chr10 32258189 32258210 -113331078 + (TA)n Simple_repeat Simple_repeat 2 22 0 2039 117 7 3 chr10 32258210 32258500 -113330788 - AluSx SINE Alu -21 291 1 2001 127 30 3 chr10 32258517 32258817 -113330471 - AluSx SINE Alu -4 308 1 180 0 0 0 chr10 32259238 32259258 -113330030 + (T)n Simple_repeat Simple_repeat 1 20 0 551 147 9 18 chr10 32259560 32259669 -113329619 + L1MA7 LINE L1 4660 4767 -1379 714 130 32 8 chr10 32259676 32259799 -113329489 + L1MA7 LINE L1 5814 5939 -352 392 283 75 0 chr10 32259854 32259960 -113329328 + L1ME LINE L1 5597 5710 -411 28 86 0 0 chr10 32260049 32260119 -113329169 + AT_rich Low_complexity Low_complexity 1 70 0 266 143 63 16 chr10 32260134 32260260 -113329028 + (TA)n Simple_repeat Simple_repeat 1 132 0 274 212 47 0 chr10 32260283 32260368 -113328920 + (TA)n Simple_repeat Simple_repeat 2 90 0 597 218 45 6 chr10 32260368 32260524 -113328764 - FAM SINE Alu -23 162 1 284 299 0 0 chr10 32260911 32261018 -113328270 + C-rich Low_complexity Low_complexity 4 110 0 1650 165 0 0 chr10 32261039 32261299 -113327989 - AluSx SINE Alu -52 260 1 484 289 142 25 chr10 32261381 32261620 -113327668 + L1ME LINE L1 5469 5735 -427 1811 183 87 9 chr10 32261679 32262106 -113327182 - L1 LINE L1 -1329 4817 4358 342 67 0 0 chr10 32262207 32262252 -113327036 + (TA)n Simple_repeat Simple_repeat 1 45 0 2212 129 0 0 chr10 32262255 32262557 -113326731 - AluSx SINE Alu -9 303 2 835 278 113 61 chr10 32262852 32263378 -113325910 + L1MEc LINE L1 2144 2641 -3574 1963 147 0 0 chr10 32263378 32263703 -113325585 + AluSx SINE Alu 1 325 0 835 278 113 61 chr10 32263703 32264513 -113324775 + L1MEc LINE L1 2641 3505 -2710 714 190 9 0 chr10 32264513 32264629 -113324659 + FLAM_C SINE Alu 1 117 -26 297 0 0 0 chr10 32264633 32264666 -113324622 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 317 268 118 8 chr10 32264668 32264795 -113324493 + L1MEc LINE L1 3495 3635 -2580 892 144 31 19 chr10 32264964 32265124 -113324164 - MSTD LTR MaLR -234 162 1 351 0 0 0 chr10 32265167 32265195 -113324093 + (TG)n Simple_repeat Simple_repeat 1 67 0 351 0 0 0 chr10 32265195 32265234 -113324054 + (TG)n Simple_repeat Simple_repeat 2 40 0 712 183 7 28 chr10 32265259 32265401 -113323887 + MLT1B LTR MaLR 192 330 -60 2106 85 11 0 chr10 32265402 32265684 -113323604 + THE1B-int LTR MaLR 1296 1580 0 1991 142 49 26 chr10 32265684 32266028 -113323260 + THE1B LTR MaLR 1 352 -12 12370 148 24 13 chr10 32266033 32269280 -113320008 + L1MA3 LINE L1 3020 6305 0 8657 180 25 21 chr10 32269268 32269292 -113319996 + L1 LINE L1 2901 2923 -3223 * 2130 79 28 3 chr10 32269292 32269582 -113319706 + AluY SINE Alu 1 297 -14 8657 180 25 21 chr10 32269582 32271417 -113317871 + L1 LINE L1 2923 4767 -1379 714 130 32 8 chr10 32271424 32271547 -113317741 + L1MA7 LINE L1 5814 5939 -352 407 274 75 0 chr10 32271602 32271708 -113317580 + L1ME LINE L1 5597 5710 -411 28 86 0 0 chr10 32271797 32271867 -113317421 + AT_rich Low_complexity Low_complexity 1 70 0 266 143 63 16 chr10 32271882 32272008 -113317280 + (TA)n Simple_repeat Simple_repeat 1 132 0 274 212 47 0 chr10 32272031 32272116 -113317172 + (TA)n Simple_repeat Simple_repeat 2 90 0 822 199 12 6 chr10 32272116 32272277 -113317011 - FAM SINE Alu -23 162 1 366 268 10 0 chr10 32272286 32272383 -113316905 - MIR SINE MIR -11 251 154 307 225 40 92 chr10 32272383 32272556 -113316732 - MER104 DNA Tc2 -13 167 4 312 229 60 24 chr10 32272558 32272641 -113316647 - MIR SINE MIR -107 155 70 1847 132 0 129 chr10 32272688 32273028 -113316260 + AluJo SINE Alu 1 296 -6 1661 132 44 0 chr10 32273710 32273961 -113315327 + AluSg SINE Alu 39 300 -10 251 132 38 38 chr10 32274304 32274357 -113314931 + MADE1 DNA Mariner 1 53 -27 22 0 0 0 chr10 32274443 32274465 -113314823 + AT_rich Low_complexity Low_complexity 1 22 0 30815 117 14 62 chr10 32274497 32280908 -113308380 + L1PA8 LINE L1 12 6105 -67 311 147 44 0 chr10 32280909 32280977 -113308311 + L1P LINE L1 4641 4711 -1435 * 407 94 0 0 chr10 32280962 32281026 -113308262 + L1PA8 LINE L1 6107 6170 -2 3192 135 0 17 chr10 32281040 32281522 -113307766 + LTR8 LTR ERV1 154 627 -64 2086 129 34 74 chr10 32281524 32281707 -113307581 + THE1B LTR MaLR 1 164 -200 2302 50 14 0 chr10 32281707 32282041 -113307247 + AluY SINE Alu 1 338 0 2086 129 34 74 chr10 32282041 32282235 -113307053 + THE1B LTR MaLR 164 364 0 3317 91 0 0 chr10 32282235 32282663 -113306625 + THE1B-int LTR MaLR 1 428 -1152 199 279 73 15 chr10 32282713 32282781 -113306507 - MIR3 SINE MIR -18 190 119 5212 146 13 68 chr10 32283012 32283159 -113306129 - MER4D LTR ERV1 0 903 749 2139 124 20 0 chr10 32283159 32283458 -113305830 - AluSx SINE Alu -7 305 1 5212 146 13 68 chr10 32283458 32284266 -113305022 - MER4D LTR ERV1 -154 749 1 22 0 0 0 chr10 32284393 32284415 -113304873 + AT_rich Low_complexity Low_complexity 1 22 0 2302 95 0 3 chr10 32284437 32284733 -113304555 + AluSc SINE Alu 1 295 -14 419 206 31 49 chr10 32285134 32285272 -113304016 + MIR SINE MIR 63 200 -62 245 154 0 0 chr10 32285325 32285364 -113303924 - MSTA LTR MaLR 0 426 388 1553 132 0 4 chr10 32285364 32285591 -113303697 + AluSg/x SINE Alu 87 312 0 189 107 0 0 chr10 32285596 32285624 -113303664 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 2475 138 17 27 chr10 32285624 32286029 -113303259 - MSTA LTR MaLR -27 401 1 1436 191 83 13 chr10 32286392 32286464 -113302824 + MER58B DNA MER1_type 6 72 -2348 219 36 0 0 chr10 32286464 32286492 -113302796 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 1436 191 83 13 chr10 32286492 32286733 -113302555 + MER58B DNA MER1_type 72 341 0 753 299 52 0 chr10 32286778 32286989 -113302299 - MIR SINE MIR -10 252 31 414 0 0 0 chr10 32287241 32287287 -113302001 + (TG)n Simple_repeat Simple_repeat 1 46 0 1060 266 80 71 chr10 32288289 32288841 -113300447 + LTR1B LTR ERV1 33 589 -237 269 349 0 0 chr10 32289090 32289176 -113300112 - L2 LINE L2 -26 3287 3202 2528 208 183 82 chr10 32289258 32290184 -113299104 - LTR28 LTR ERV1 0 1020 2 549 288 36 4 chr10 32290649 32290818 -113298470 - MER5B DNA MER1_type 0 178 17 302 214 71 51 chr10 32290844 32290942 -113298346 - MLT1I LTR MaLR -270 139 40 2663 203 114 40 chr10 32291799 32291986 -113297302 + HAL1 LINE L1 959 1131 -1376 2089 120 17 3 chr10 32291986 32292287 -113297001 + AluSq SINE Alu 1 305 -8 2663 203 114 40 chr10 32292287 32292955 -113296333 + HAL1 LINE L1 1131 1878 -629 1862 133 29 16 chr10 32293750 32294058 -113295230 + AluSq SINE Alu 1 312 -1 307 189 54 14 chr10 32294087 32294161 -113295127 + L1MC4a LINE L1 5812 5888 -1920 2324 114 0 0 chr10 32294354 32294661 -113294627 - AluSx SINE Alu -5 307 1 546 276 142 25 chr10 32294743 32294982 -113294306 + L1ME LINE L1 5469 5735 -427 7536 164 36 29 chr10 32295041 32295504 -113293784 - L1 LINE L1 -1329 4817 4359 2177 86 7 17 chr10 32295504 32295835 -113293453 + AluSx SINE Alu 5 312 0 7536 164 36 29 chr10 32295835 32296211 -113293077 - L1 LINE L1 -1787 4359 3987 2056 118 3 3 chr10 32296211 32296524 -113292764 - AluSx SINE Alu 0 313 1 7536 164 36 29 chr10 32296524 32296591 -113292697 - L1 LINE L1 -2159 3987 3922 3044 110 36 0 chr10 32296591 32297010 -113292278 + MER57B LTR ERV1 1 434 0 7536 164 36 29 chr10 32297010 32297638 -113291650 - L1 LINE L1 -2224 3922 3269 1650 171 25 165 chr10 32297642 32298158 -113291130 - MER70B LTR ERVL -134 444 1 957 208 60 18 chr10 32298161 32298374 -113290914 - L1 LINE L1 -2882 3264 3035 1826 100 112 4 chr10 32298374 32298643 -113290645 - AluSg SINE Alu -12 298 1 957 208 60 18 chr10 32298643 32298713 -113290575 - L1 LINE L1 -3111 3035 2969 1316 229 48 0 chr10 32298714 32299046 -113290242 + L1ME1 LINE L1 4950 5297 -849 6311 146 38 12 chr10 32299050 32300760 -113288528 - L1PB2 LINE L1 0 6151 4372 258 56 0 0 chr10 32300760 32300796 -113288492 + (TTTTA)n Simple_repeat Simple_repeat 2 37 0 6311 146 38 12 chr10 32300796 32301191 -113288097 - L1PB2 LINE L1 -1779 4372 3988 617 230 0 0 chr10 32301206 32301341 -113287947 + L1ME1 LINE L1 5326 5460 -704 961 215 45 21 chr10 32301341 32301583 -113287705 + LTR52 LTR ERVL 1 248 -173 1199 144 0 26 chr10 32301583 32301778 -113287510 - AluJb SINE Alu -7 305 116 582 135 58 0 chr10 32301778 32301882 -113287406 + FLAM_C SINE Alu 2 111 -32 582 171 40 194 chr10 32302048 32302088 -113287200 + LTR52 LTR ERVL 209 254 -167 1841 146 0 56 chr10 32302088 32302282 -113287006 - AluJb SINE Alu -7 305 135 1853 151 0 35 chr10 32302282 32302594 -113286694 + AluJo SINE Alu 1 301 -11 1841 146 0 56 chr10 32302594 32302722 -113286566 - AluJb SINE Alu -177 135 1 582 171 40 194 chr10 32302722 32302749 -113286539 + LTR52 LTR ERVL 254 284 -137 752 106 19 0 chr10 32302749 32302853 -113286435 - U6 snRNA snRNA -1 106 1 582 171 40 194 chr10 32302853 32303036 -113286252 + LTR52 LTR ERVL 284 421 0 1312 213 96 147 chr10 32303039 32303360 -113285928 + L1ME1 LINE L1 5460 5796 -370 511 91 0 65 chr10 32303360 32303437 -113285851 + AluJ/FRAM SINE Alu 226 297 -15 1312 213 96 147 chr10 32303437 32303782 -113285506 + L1ME1 LINE L1 5796 6164 -2 199 238 24 0 chr10 32303871 32303913 -113285375 - L2 LINE L2 -1152 2162 2120 1417 226 163 88 chr10 32303933 32304816 -113284472 - HAL1 LINE L1 -709 1798 850 694 149 203 0 chr10 32304818 32304966 -113284322 - MLT1E LTR MaLR -5 500 323 818 128 45 0 chr10 32305263 32305396 -113283892 + MER85 DNA T2_type 1 139 0 817 269 51 62 chr10 32305464 32305820 -113283468 - MLT1E LTR MaLR -237 356 6 220 310 81 21 chr10 32305966 32306134 -113283154 - L2 LINE L2 -16 3256 3113 22 0 0 0 chr10 32306644 32306666 -113282622 + AT_rich Low_complexity Low_complexity 1 22 0 1137 133 0 6 chr10 32307547 32307705 -113281583 + AluSx SINE Alu 1 157 -155 204 182 0 0 chr10 32307756 32307800 -113281488 + GA-rich Low_complexity Low_complexity 1 44 0 233 146 21 0 chr10 32307859 32307907 -113281381 + GA-rich Low_complexity Low_complexity 3 51 0 308 254 109 55 chr10 32308517 32308615 -113280673 + L1MEd LINE L1 922 1013 -5106 2349 107 0 0 chr10 32308615 32308924 -113280364 + AluSx SINE Alu 1 309 -3 308 254 109 55 chr10 32308924 32309100 -113280188 + L1MEd LINE L1 1013 1211 -4908 1179 227 65 57 chr10 32309172 32309678 -113279610 + L1MC5 LINE L1 7404 7913 -48 2134 126 7 0 chr10 32310046 32310339 -113278949 - AluSx SINE Alu -17 295 1 2318 94 16 0 chr10 32310444 32310751 -113278537 - AluSx SINE Alu 0 312 1 229 135 0 0 chr10 32310823 32310860 -113278428 + L1P LINE L1 5214 5250 -896 2257 96 0 0 chr10 32311483 32311764 -113277524 - AluSg SINE Alu -29 281 1 1096 108 38 181 chr10 32311888 32312231 -113277057 - L1PBa LINE L1 -4763 2100 1807 1042 158 5 35 chr10 32312238 32312440 -113276848 + AluJb SINE Alu 108 303 -9 2170 127 0 0 chr10 32312526 32312826 -113276462 + AluSx SINE Alu 1 300 -12 21 0 0 0 chr10 32313694 32313715 -113275573 + AT_rich Low_complexity Low_complexity 1 21 0 2131 102 20 7 chr10 32313812 32314107 -113275181 + AluSx SINE Alu 1 299 -13 2168 111 3 23 chr10 32314118 32314424 -113274864 + AluSx SINE Alu 1 300 -12 286 254 149 45 chr10 32315000 32315134 -113274154 - MIR SINE MIR -21 241 94 827 189 26 0 chr10 32315182 32315335 -113273953 - AluSg/x SINE Alu -18 294 138 2174 101 44 0 chr10 32315373 32315670 -113273618 + AluSq SINE Alu 1 310 -3 1095 219 20 65 chr10 32315712 32315806 -113273482 - MER8 DNA MER2_type 0 239 142 2274 77 40 7 chr10 32315806 32316104 -113273184 + AluY SINE Alu 1 308 -3 1095 219 20 65 chr10 32316104 32316256 -113273032 - MER8 DNA MER2_type -97 142 4 822 189 0 0 chr10 32316763 32316890 -113272398 - FLAM_A SINE Alu -3 130 4 23 0 0 0 chr10 32317938 32317961 -113271327 + AT_rich Low_complexity Low_complexity 1 23 0 2160 107 3 0 chr10 32318112 32318401 -113270887 + AluSx SINE Alu 23 312 0 240 59 0 0 chr10 32319005 32319039 -113270249 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 200 286 0 36 chr10 32319292 32319348 -113269940 + MIR SINE MIR 87 140 -68 2137 136 0 0 chr10 32319740 32320042 -113269246 - AluSx SINE Alu -10 302 1 2244 106 17 0 chr10 32320107 32320408 -113268880 + AluSx SINE Alu 1 306 -6 2169 112 0 14 chr10 32321356 32321652 -113267636 - AluSx SINE Alu -20 292 1 1264 162 21 30 chr10 32323498 32323732 -113265556 + AluJb SINE Alu 27 258 -54 1703 176 20 0 chr10 32323743 32324039 -113265249 + AluJb SINE Alu 5 306 -6 182 333 117 18 chr10 32324075 32324186 -113265102 - L2 LINE L2 -556 2758 2637 217 322 223 0 chr10 32324485 32324606 -113264682 + L2 LINE L2 3123 3270 -2 291 54 0 0 chr10 32324732 32324769 -113264519 + (TTTTA)n Simple_repeat Simple_repeat 3 39 0 667 38 0 0 chr10 32324773 32324853 -113264435 - HY3 scRNA scRNA -2 99 20 249 163 0 23 chr10 32325332 32325375 -113263913 + Alu SINE Alu 171 212 -87 2125 112 30 3 chr10 32326348 32326652 -113262636 + AluSx SINE Alu 1 312 0 1549 139 19 15 chr10 32326664 32326923 -113262365 + AluSx SINE Alu 1 260 -52 2315 82 0 3 chr10 32327131 32327424 -113261864 - AluY SINE Alu -19 292 1 1544 203 0 3 chr10 32327513 32327799 -113261489 + AluJo SINE Alu 1 285 -27 1669 139 24 133 chr10 32327850 32328182 -113261106 + AluJo SINE Alu 1 296 -6 25 0 0 0 chr10 32328185 32328210 -113261078 + AT_rich Low_complexity Low_complexity 1 25 0 1814 118 61 17 chr10 32328336 32328633 -113260655 + AluSx SINE Alu 1 310 -2 2026 134 3 13 chr10 32329079 32329386 -113259902 + AluSx SINE Alu 1 304 -8 24 0 0 0 chr10 32329912 32329936 -113259352 + AT_rich Low_complexity Low_complexity 1 24 0 2078 116 0 38 chr10 32330821 32331158 -113258130 + AluSx SINE Alu 2 327 0 2248 118 0 0 chr10 32331180 32331476 -113257812 + AluSx SINE Alu 3 298 -14 270 306 129 14 chr10 32331764 32331973 -113257315 + L1ME LINE L1 5318 5550 -571 1925 102 0 16 chr10 32332598 32332853 -113256435 + AluSx SINE Alu 23 273 -39 243 289 24 0 chr10 32332956 32333039 -113256249 - L1ME LINE L1 -506 5615 5531 29 0 0 0 chr10 32334057 32334086 -113255202 + AT_rich Low_complexity Low_complexity 1 29 0 1684 171 63 0 chr10 32334891 32335178 -113254110 + AluJo SINE Alu 1 305 -7 5836 82 152 8 chr10 32335866 32336782 -113252506 - L1P LINE L1 -5098 1048 1 1927 116 20 3 chr10 32336788 32337089 -113252199 - L1PBa LINE L1 -4950 1913 1608 456 88 0 0 chr10 32337090 32337147 -113252141 - U6 snRNA snRNA -1 106 50 346 352 62 6 chr10 32337445 32337607 -113251681 + MIR3 SINE MIR 21 191 -17 1678 183 3 24 chr10 32341550 32341845 -113247443 - AluJo SINE Alu -23 289 1 268 180 82 0 chr10 32341856 32341917 -113247371 - MER94 DNA DNA -68 66 1 482 123 25 12 chr10 32344662 32344743 -113244545 + AluY SINE Alu 219 300 -11 777 91 0 68 chr10 32344861 32344993 -113244295 + AluSg/x SINE Alu 187 309 0 998 121 0 0 chr10 32345012 32345144 -113244144 + AluSg SINE Alu 2 133 -177 2207 105 20 3 chr10 32345144 32345448 -113243840 + AluSx SINE Alu 1 309 -3 628 285 58 23 chr10 32345494 32345803 -113243485 + L1ME LINE L1 47 366 -5704 574 254 105 28 chr10 32345815 32346063 -113243225 - LTR41 LTR ERVL -7 766 500 966 234 121 16 chr10 32346191 32346555 -113242733 + L1ME LINE L1 2117 2518 -3562 1426 220 118 8 chr10 32346600 32347119 -113242169 + L1ME LINE L1 2609 3184 -2896 11190 157 26 11 chr10 32347235 32350400 -113238888 + L1MA3 LINE L1 3091 6304 -1 2486 83 27 5 chr10 32350424 32350996 -113238292 - L1P3 LINE L1 -551 5603 5024 292 200 84 21 chr10 32351183 32351278 -113238010 - LTR41 LTR ERVL -672 101 1 2241 108 20 0 chr10 32351497 32351803 -113237485 - AluSx SINE Alu 0 312 1 21 0 0 0 chr10 32352000 32352021 -113237267 + AT_rich Low_complexity Low_complexity 1 21 0 2218 127 0 0 chr10 32352450 32352758 -113236530 - AluSc SINE Alu 0 309 2 5117 84 3 0 chr10 32353018 32353676 -113235612 + PABL_A LTR ERV1 1 660 0 200 328 0 0 chr10 32353728 32353786 -113235502 + MIR SINE MIR 48 105 -103 1574 175 111 143 chr10 32354244 32354974 -113234314 - LTR8A LTR ERV1 -20 707 1 8257 104 2 25 chr10 32355317 32356510 -113232778 + L1P3 LINE L1 5 1170 -5291 292 247 27 0 chr10 32357218 32357291 -113231997 - MLT1K LTR MaLR -6 582 508 414 174 7 0 chr10 32357343 32357443 -113231845 - AluJ/FLAM SINE Alu -235 67 1 420 207 0 34 chr10 32357669 32357794 -113231494 + L1MC/D LINE L1 5724 5837 -305 1072 277 37 35 chr10 32358531 32358935 -113230353 + MLT1I LTR MaLR 1 405 -4 2195 87 28 3 chr10 32359472 32359761 -113229527 - AluSx SINE Alu -16 296 1 27 29 0 0 chr10 32360034 32360068 -113229220 + AT_rich Low_complexity Low_complexity 1 34 0 2160 100 0 4 chr10 32360207 32360488 -113228800 - AluSx SINE Alu -32 280 1 736 174 23 0 chr10 32360598 32360730 -113228558 + AluJb SINE Alu 2 136 -176 2523 58 0 0 chr10 32360734 32361028 -113228260 + AluY SINE Alu 1 294 -17 30 0 0 0 chr10 32361028 32361058 -113228230 + AT_rich Low_complexity Low_complexity 1 30 0 779 272 53 24 chr10 32361152 32361398 -113227890 - MIR SINE MIR -9 253 1 1515 170 46 32 chr10 32361518 32361800 -113227488 + AluSx SINE Alu 1 286 -26 29 0 0 0 chr10 32361803 32361832 -113227456 + AT_rich Low_complexity Low_complexity 1 29 0 2154 126 0 0 chr10 32362273 32362574 -113226714 + AluSx SINE Alu 1 301 -11 1987 145 7 10 chr10 32363099 32363409 -113225879 + AluSx SINE Alu 1 309 -3 2117 112 3 3 chr10 32363633 32363929 -113225359 + AluSx SINE Alu 12 307 -5 237 262 135 64 chr10 32364050 32364612 -113224676 + L1M4 LINE L1 2223 2824 -3322 2305 89 3 0 chr10 32365037 32365328 -113223960 + AluSp SINE Alu 1 292 -21 693 175 35 0 chr10 32365351 32365465 -113223823 + FLAM_C SINE Alu 1 118 -15 35 0 0 0 chr10 32365476 32365511 -113223777 + AT_rich Low_complexity Low_complexity 1 35 0 1589 160 46 25 chr10 32365878 32366159 -113223129 + AluJo SINE Alu 1 287 -25 497 24 48 24 chr10 32366159 32366242 -113223046 + (CATAA)n Simple_repeat Simple_repeat 2 86 0 2244 107 0 3 chr10 32366286 32366594 -113222694 + AluSq SINE Alu 1 307 -6 2476 84 0 0 chr10 32366736 32367047 -113222241 + AluY SINE Alu 1 311 0 2094 122 20 0 chr10 32367099 32367394 -113221894 + AluSx SINE Alu 1 301 -11 381 214 0 11 chr10 32367947 32368036 -113221252 - L1MB3 LINE L1 -86 6097 6010 2249 115 0 0 chr10 32368531 32368826 -113220462 + AluSx SINE Alu 1 295 -17 888 178 43 0 chr10 32368966 32369129 -113220159 + FAM SINE Alu 1 170 -5 1855 145 11 64 chr10 32369685 32369851 -113219437 - MER44D DNA MER2_type -1882 609 436 2159 112 11 0 chr10 32369851 32370138 -113219150 + AluSx SINE Alu 1 290 -22 1855 145 11 64 chr10 32370138 32370329 -113218959 - MER44D DNA MER2_type -2055 436 1 1541 118 169 0 chr10 32371061 32371316 -113217972 + AluSx SINE Alu 1 298 -4 2038 135 0 13 chr10 32371459 32371763 -113217525 - AluSx SINE Alu -12 300 1 183 350 29 58 chr10 32371831 32372105 -113217183 + L2 LINE L2 2596 2861 -453 216 330 119 9 chr10 32372174 32372283 -113217005 + L2 LINE L2 2948 3068 -204 2162 117 3 0 chr10 32372600 32372898 -113216390 - AluSx SINE Alu -13 299 1 338 247 113 27 chr10 32373068 32373358 -113215930 - L1ME4a LINE L1 -202 5919 5599 181 326 109 80 chr10 32373528 32373659 -113215629 + L3 LINE CR1 683 809 -768 2052 118 30 3 chr10 32373659 32373955 -113215333 + AluSx SINE Alu 1 304 -8 181 326 109 80 chr10 32373955 32374384 -113214904 + L3 LINE CR1 809 1259 -318 354 200 14 0 chr10 32374958 32375028 -113214260 + MLT1K LTR MaLR 518 588 0 270 296 244 24 chr10 32375088 32375301 -113213987 + L3 LINE CR1 1316 1575 -2 2356 93 3 0 chr10 32375504 32375804 -113213484 + AluSx SINE Alu 1 301 -11 201 231 41 124 chr10 32375821 32375942 -113213346 + MIR SINE MIR 66 176 -86 268 228 81 15 chr10 32376252 32376383 -113212905 + MIR SINE MIR 73 212 -50 198 0 0 0 chr10 32377174 32377196 -113212092 + (A)n Simple_repeat Simple_repeat 1 22 0 2160 113 7 10 chr10 32377467 32377769 -113211519 + AluSx SINE Alu 3 303 -9 185 308 44 0 chr10 32377962 32378053 -113211235 - MIR3 SINE MIR -30 178 84 329 273 106 0 chr10 32378301 32378433 -113210855 - MIR SINE MIR -29 233 88 2241 103 3 0 chr10 32378458 32378748 -113210540 + AluSx SINE Alu 1 291 -21 2062 143 3 0 chr10 32379031 32379331 -113209957 - AluSx SINE Alu -9 303 3 2463 134 55 0 chr10 32379462 32379866 -113209422 + MSTB LTR MaLR 1 426 0 310 241 226 0 chr10 32380154 32380287 -113209001 - L1ME LINE L1 -459 5662 5500 2546 130 21 3 chr10 32380322 32380707 -113208581 + MSTA LTR MaLR 16 407 -21 342 294 12 28 chr10 32380730 32380904 -113208384 - L1ME LINE L1 -735 5427 5257 455 132 105 26 chr10 32381659 32381773 -113207515 + MER53 DNA DNA 3 125 -64 2202 113 0 3 chr10 32382280 32382572 -113206716 - AluSx SINE Alu -21 291 1 325 306 228 14 chr10 32382645 32383165 -113206123 - L2 LINE L2 -28 3285 2643 440 254 18 0 chr10 32383868 32383982 -113205306 + MER5B DNA MER1_type 2 117 -61 1671 160 3 20 chr10 32384469 32384762 -113204526 + AluJo SINE Alu 1 288 -24 246 161 89 0 chr10 32384830 32384886 -113204402 + MIR SINE MIR 85 145 -63 2332 104 3 0 chr10 32386879 32387187 -113202101 + AluSg SINE Alu 1 309 -1 360 0 0 0 chr10 32387239 32387279 -113202009 + (CA)n Simple_repeat Simple_repeat 2 41 0 22 35 0 0 chr10 32389432 32389461 -113199827 + AT_rich Low_complexity Low_complexity 1 29 0 348 302 151 44 chr10 32390502 32390727 -113198561 + L3 LINE CR1 1011 1259 -318 349 200 14 0 chr10 32391300 32391370 -113197918 + MLT1K LTR MaLR 518 588 0 314 285 248 33 chr10 32391430 32391644 -113197644 + L3 LINE CR1 1316 1575 -2 247 256 43 119 chr10 32391790 32391846 -113197442 + MIR SINE MIR 2 61 -177 2249 90 3 0 chr10 32391846 32392146 -113197142 + AluSx SINE Alu 1 301 -11 247 256 43 119 chr10 32392146 32392284 -113197004 + MIR SINE MIR 61 176 -62 310 252 99 23 chr10 32392594 32392725 -113196563 + MIR SINE MIR 72 212 -50 198 0 0 0 chr10 32393516 32393538 -113195750 + (A)n Simple_repeat Simple_repeat 1 22 0 2033 113 7 10 chr10 32393809 32394111 -113195177 + AluSx SINE Alu 3 303 -9 227 309 66 29 chr10 32394254 32394438 -113194850 - MIR3 SINE MIR -30 178 37 390 273 106 0 chr10 32394644 32394776 -113194512 - MIR SINE MIR -29 233 88 2033 121 3 0 chr10 32394801 32395099 -113194189 + AluSx SINE Alu 1 299 -13 219 340 130 0 chr10 32395425 32395525 -113193763 - L2 LINE L2 -212 3060 2948 268 350 29 58 chr10 32395594 32395868 -113193420 - L2 LINE L2 -453 2861 2596 1919 135 0 13 chr10 32395936 32396240 -113193048 + AluSx SINE Alu 1 300 -12 1579 114 169 0 chr10 32396381 32396636 -113192652 - AluSx SINE Alu -4 298 1 207 88 29 0 chr10 32400226 32400260 -113189028 + (CCCCCA)n Simple_repeat Simple_repeat 6 40 0 899 169 7 0 chr10 32401407 32401561 -113187727 - 7SLRNA srpRNA srpRNA -71 249 95 328 293 165 0 chr10 32402299 32402432 -113186856 - MIR SINE MIR -6 256 102 209 32 0 32 chr10 32402490 32402521 -113186767 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 1644 159 30 0 chr10 32402522 32402668 -113186620 - AluSx SINE Alu -32 280 121 513 0 0 0 chr10 32402668 32402725 -113186563 + (TG)n Simple_repeat Simple_repeat 1 57 0 1644 159 30 0 chr10 32402725 32402849 -113186439 - AluSx SINE Alu -191 121 2 238 342 7 0 chr10 32403623 32403775 -113185513 + CT-rich Low_complexity Low_complexity 1 153 0 225 0 0 0 chr10 32404004 32404029 -113185259 + (CAAAA)n Simple_repeat Simple_repeat 4 28 0 199 231 231 0 chr10 32404567 32404619 -113184669 - MIR SINE MIR -111 151 88 404 160 155 105 chr10 32405201 32405435 -113183853 - MIR SINE MIR -10 252 16 1618 168 27 7 chr10 32406499 32406791 -113182497 + AluSx SINE Alu 1 298 -14 1841 162 0 0 chr10 32407895 32408197 -113181091 + AluSx SINE Alu 1 302 -10 345 279 41 41 chr10 32408927 32409049 -113180239 - MIR3 SINE MIR -25 183 62 223 237 132 26 chr10 32409278 32409354 -113179934 - MIR SINE MIR -70 192 109 210 180 0 60 chr10 32410049 32410099 -113179189 + (TATATG)n Simple_repeat Simple_repeat 6 52 0 2025 133 3 0 chr10 32410413 32410721 -113178567 + AluSx SINE Alu 1 309 -3 869 192 6 13 chr10 32411046 32411202 -113178086 + MER5A DNA MER1_type 2 156 -33 2273 100 3 0 chr10 32411552 32411861 -113177427 + AluSp SINE Alu 1 310 -3 1623 167 4 4 chr10 32412263 32412538 -113176750 + AluJo SINE Alu 1 275 -37 574 262 141 22 chr10 32412646 32412990 -113176298 + L1ME LINE L1 5317 5701 -458 23 33 0 0 chr10 32413345 32413375 -113175913 + AT_rich Low_complexity Low_complexity 1 30 0 774 195 39 19 chr10 32413429 32413645 -113175643 - L1MB7 LINE L1 -221 5963 5771 1477 157 86 4 chr10 32414886 32415166 -113174122 - AluJb SINE Alu -9 303 1 820 170 25 25 chr10 32415313 32415472 -113173816 + AluJo SINE Alu 5 163 -149 876 142 0 14 chr10 32416438 32416579 -113172709 + AluJb SINE Alu 118 256 -56 2039 110 0 13 chr10 32417112 32417412 -113171876 + AluJb SINE Alu 9 304 -8 272 298 26 33 chr10 32417441 32417592 -113171696 - L1ME4a LINE L1 -201 5920 5771 206 311 14 14 chr10 32418186 32418260 -113171028 - L2 LINE L2 -3 3310 3237 1638 157 47 30 chr10 32419302 32419601 -113169687 + AluJb SINE Alu 1 304 -8 1825 149 3 20 chr10 32419725 32419913 -113169375 - AluSx SINE Alu -15 297 114 3596 119 39 47 chr10 32419913 32420532 -113168756 - LTR18B LTR ERVL 0 614 1 1825 149 3 20 chr10 32420532 32420645 -113168643 - AluSx SINE Alu -198 114 1 269 161 0 54 chr10 32420738 32420794 -113168494 - L1ME4a LINE L1 -360 5761 5709 * 284 197 43 51 chr10 32420790 32420907 -113168381 + L1ME LINE L1 5711 5826 -295 238 245 158 62 chr10 32421033 32421166 -113168122 + MIR3 SINE MIR 18 163 -45 1001 98 0 0 chr10 32421170 32421302 -113167986 + AluY SINE Alu 1 132 -179 2247 58 0 27 chr10 32421306 32421601 -113167687 + AluY SINE Alu 1 287 -24 484 313 33 62 chr10 32422688 32423056 -113166232 - MLT1K LTR MaLR -6 582 226 1564 189 38 58 chr10 32423126 32423522 -113165766 - MLT1B LTR MaLR 0 390 3 480 18 0 0 chr10 32423617 32423674 -113165614 + (CA)n Simple_repeat Simple_repeat 2 58 0 3015 251 76 38 chr10 32424083 32425208 -113164080 + HAL1 LINE L1 1304 2471 -36 1047 116 104 93 chr10 32425309 32425402 -113163886 + L1MA9 LINE L1 6051 6141 -171 1746 120 42 39 chr10 32425402 32425646 -113163642 - L1MA5 LINE L1 -2 6298 6051 1705 185 0 3 chr10 32425646 32425944 -113163344 - AluJb SINE Alu -15 297 1 1746 120 42 39 chr10 32425944 32426032 -113163256 - L1MA5 LINE L1 -249 6051 5965 1047 116 104 93 chr10 32426032 32426061 -113163227 + L1MA9 LINE L1 6141 6168 -144 180 0 0 0 chr10 32426061 32426081 -113163207 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1047 116 104 93 chr10 32426081 32426216 -113163072 + L1MA9 LINE L1 6168 6312 0 1781 97 93 0 chr10 32426252 32426509 -113162779 + AluSx SINE Alu 1 281 -31 351 0 0 0 chr10 32426511 32426550 -113162738 + (CA)n Simple_repeat Simple_repeat 2 40 0 462 278 15 44 chr10 32426569 32426722 -113162566 - MIR3 SINE MIR -15 193 41 181 250 21 42 chr10 32427437 32427485 -113161803 + MIR SINE MIR 20 66 -196 192 133 33 0 chr10 32427737 32427767 -113161521 + MIR SINE MIR 115 145 -63 570 202 39 8 chr10 32428191 32428320 -113160968 + MER94 DNA DNA 2 134 0 215 214 0 0 chr10 32428335 32428377 -113160911 + CT-rich Low_complexity Low_complexity 2 43 0 2355 69 0 3 chr10 32428433 32428736 -113160552 + AluSg1 SINE Alu 1 302 -7 1435 208 68 17 chr10 32429550 32429569 -113159719 - L1ME3 LINE L1 0 6162 6145 952 182 80 144 chr10 32429569 32429652 -113159636 + MSTD LTR MaLR 1 88 -308 1914 85 22 15 chr10 32429652 32429924 -113159364 - AluSc SINE Alu -14 295 22 952 182 80 144 chr10 32429924 32430263 -113159025 + MSTD LTR MaLR 88 396 0 1435 208 68 17 chr10 32430263 32430594 -113158694 - L1ME3 LINE L1 -17 6145 5794 2137 98 37 0 chr10 32430610 32430905 -113158383 - AluSg SINE Alu -4 306 1 688 296 116 5 chr10 32431241 32431457 -113157831 - MIR SINE MIR -21 241 2 261 133 0 0 chr10 32432133 32432178 -113157110 - AluJ/FLAM SINE Alu -218 84 40 287 259 0 7 chr10 32432227 32432362 -113156926 + (CA)n Simple_repeat Simple_repeat 2 135 0 27 0 0 0 chr10 32432571 32432598 -113156690 + AT_rich Low_complexity Low_complexity 1 27 0 1349 239 65 75 chr10 32432601 32433111 -113156177 + MER77 LTR ERV1 54 558 -47 613 208 32 8 chr10 32433894 32434019 -113155269 + MLT1A2 LTR MaLR 1 128 -246 19279 138 17 14 chr10 32434019 32436989 -113152299 + L1M1 LINE L1 27 3004 -4561 971 204 71 31 chr10 32436989 32437214 -113152074 - MER77 LTR ERV1 -196 409 176 1923 119 10 7 chr10 32437229 32437524 -113151764 + AluSx SINE Alu 1 296 -16 655 192 0 32 chr10 32437527 32437652 -113151636 - MER77 LTR ERV1 -484 121 1 372 225 25 0 chr10 32437659 32437739 -113151549 + MER5B DNA MER1_type 24 105 -73 1934 142 14 96 chr10 32437950 32438304 -113150984 - L1MB8 LINE L1 -55 6123 5808 796 146 23 0 chr10 32438304 32438434 -113150854 - FLAM_C SINE Alu 0 133 1 1934 142 14 96 chr10 32438434 32438508 -113150780 - L1MB8 LINE L1 -370 5808 5730 612 249 5 29 chr10 32439141 32439350 -113149938 - L1M4 LINE L1 -1721 4425 4222 2400 60 0 11 chr10 32439356 32439672 -113149616 + AluY SINE Alu 1 313 0 1222 137 0 11 chr10 32439672 32439854 -113149434 + AluSg/x SINE Alu 127 306 -4 2092 131 51 26 chr10 32439869 32440221 -113149067 + THE1B LTR MaLR 1 361 -3 1944 208 59 2 chr10 32440221 32440674 -113148614 - L1M4 LINE L1 -1923 4223 3742 284 327 137 0 chr10 32440674 32440827 -113148461 + L2 LINE L2 2616 2789 -525 1429 149 0 0 chr10 32440839 32441047 -113148241 - AluJo SINE Alu -18 294 87 705 313 68 26 chr10 32441059 32441428 -113147860 + L2 LINE L2 2793 3145 -168 189 0 0 0 chr10 32441428 32441449 -113147839 + (TTA)n Simple_repeat Simple_repeat 3 23 0 7651 26 0 0 chr10 32441449 32442435 -113146853 - L1PA4 LINE L1 -18 6137 5152 705 313 68 26 chr10 32442435 32442460 -113146828 + L2 LINE L2 3144 3203 -110 1569 196 0 11 chr10 32442515 32442796 -113146492 + AluJb SINE Alu 7 284 -28 459 239 13 45 chr10 32442821 32442976 -113146312 - L2 LINE L2 -45 3268 3119 904 222 56 65 chr10 32442992 32443048 -113146240 + L1MA9 LINE L1 5981 6036 -276 2115 107 16 16 chr10 32443048 32443357 -113145931 + AluSx SINE Alu 1 309 -3 904 222 56 65 chr10 32443357 32443606 -113145682 + L1MA9 LINE L1 6036 6283 -29 927 97 8 0 chr10 32443660 32443784 -113145504 - AluJb SINE Alu -186 126 2 1332 96 0 27 chr10 32443810 32443998 -113145290 - LTR8 LTR ERV1 -100 591 409 578 286 197 13 chr10 32443998 32444313 -113144975 - L2 LINE L2 -1415 1899 1527 2233 90 41 0 chr10 32444583 32444873 -113144415 - AluSx SINE Alu -10 302 1 1158 122 12 0 chr10 32444934 32445098 -113144190 - AluSg/x SINE Alu -12 298 133 1785 163 3 3 chr10 32445102 32445390 -113143898 - AluJb SINE Alu -24 288 1 639 217 32 26 chr10 32445402 32445578 -113143710 + L1P4 LINE L1 5593 5771 -403 2073 146 0 0 chr10 32445754 32446055 -113143233 + AluSx SINE Alu 1 301 -11 2054 163 0 0 chr10 32446070 32446376 -113142912 + AluSx SINE Alu 1 306 -6 1043 177 0 11 chr10 32446405 32446580 -113142708 + AluJo SINE Alu 1 173 -139 1987 125 66 0 chr10 32446862 32447151 -113142137 - AluSq SINE Alu -5 308 1 541 186 88 0 chr10 32447206 32447319 -113141969 - MER65C LTR ERV1 0 461 339 * 779 190 35 7 chr10 32447315 32447457 -113141831 - MER65C LTR ERV1 -313 148 3 192 231 0 0 chr10 32447817 32447856 -113141432 + MIR SINE MIR 35 73 -135 1974 160 3 3 chr10 32447912 32448224 -113141064 - AluSx SINE Alu 0 312 1 2324 107 3 0 chr10 32448707 32449007 -113140281 + AluSx SINE Alu 1 301 -11 2281 118 3 0 chr10 32449071 32449376 -113139912 + AluSp SINE Alu 1 306 -7 263 248 220 0 chr10 32449648 32449757 -113139531 - MIR SINE MIR -82 180 48 429 284 116 16 chr10 32449797 32449987 -113139301 + L1ME LINE L1 5597 5805 -316 306 158 58 12 chr10 32449992 32450163 -113139125 + (TA)n Simple_repeat Simple_repeat 1 179 0 400 218 47 18 chr10 32450183 32450353 -113138935 + (TA)n Simple_repeat Simple_repeat 2 176 0 588 121 0 0 chr10 32450355 32450446 -113138842 + (CA)n Simple_repeat Simple_repeat 2 92 0 841 214 19 0 chr10 32450452 32450611 -113138677 - FAM SINE Alu -13 162 1 307 243 9 56 chr10 32450620 32450727 -113138561 - MIR SINE MIR -11 251 150 2204 118 0 13 chr10 32450779 32451083 -113138205 + AluSx SINE Alu 1 300 -12 308 281 41 97 chr10 32451303 32451499 -113137789 + MER5A DNA MER1_type 4 188 -1 1582 188 53 0 chr10 32451564 32451846 -113137442 - AluJo SINE Alu -10 302 6 236 54 54 0 chr10 32451889 32451926 -113137362 + T-rich Low_complexity Low_complexity 2 40 0 746 162 0 0 chr10 32451928 32452045 -113137243 - FLAM_C SINE Alu -15 118 2 1295 146 130 24 chr10 32452329 32452483 -113136805 - AluJo SINE Alu 0 301 165 207 0 0 0 chr10 32452483 32452506 -113136782 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1295 146 130 24 chr10 32452506 32452625 -113136663 - AluJo SINE Alu -136 165 1 2114 139 0 0 chr10 32453156 32453457 -113135831 + AluSx SINE Alu 1 301 -11 1164 74 23 0 chr10 32453479 32453655 -113135633 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 2083 136 3 3 chr10 32453660 32453970 -113135318 + AluSx SINE Alu 2 311 -1 189 245 38 0 chr10 32454437 32454490 -113134798 - MIR SINE MIR -133 129 75 482 127 0 0 chr10 32454672 32454743 -113134545 - Alu SINE Alu -9 301 231 519 255 79 47 chr10 32454863 32455141 -113134147 + L2 LINE L2 3027 3313 0 262 325 61 31 chr10 32455912 32456075 -113133213 + MIR SINE MIR 30 197 -65 344 314 8 8 chr10 32456201 32456319 -113132969 - MIR SINE MIR -102 160 43 1764 103 0 56 chr10 32456744 32456881 -113132407 + AluSq SINE Alu 1 120 -193 2223 92 0 21 chr10 32456881 32457207 -113132081 + AluSg SINE Alu 3 322 0 1764 103 0 56 chr10 32457207 32457320 -113131968 + AluSq SINE Alu 120 238 -75 1289 171 30 34 chr10 32457352 32457616 -113131672 + AluJo SINE Alu 35 297 -15 1483 217 40 42 chr10 32457673 32457989 -113131299 + MER63B DNA MER1_type 1 317 -745 1790 153 0 0 chr10 32457989 32458257 -113131031 - AluJb SINE Alu -11 301 34 1483 217 40 42 chr10 32458257 32458341 -113130947 + MER63B DNA MER1_type 317 400 -36 365 248 72 20 chr10 32459045 32459198 -113130090 + MIR SINE MIR 102 262 0 2147 138 0 0 chr10 32459214 32459518 -113129770 - AluSq SINE Alu -7 306 3 700 181 8 15 chr10 32459620 32459753 -113129535 + FLAM_C SINE Alu 2 133 -10 1125 200 77 82 chr10 32459893 32459946 -113129342 + MLT1A1 LTR MaLR 1 53 -312 3843 111 57 23 chr10 32459946 32460066 -113129222 - MER41B LTR ERV1 0 635 521 2250 102 20 0 chr10 32460066 32460359 -113128929 + AluSx SINE Alu 1 299 -13 3843 111 57 23 chr10 32460359 32460852 -113128436 - MER41B LTR ERV1 -114 521 1 1125 200 77 82 chr10 32460852 32461163 -113128125 + MLT1A1 LTR MaLR 53 363 -2 2118 138 13 0 chr10 32461328 32461633 -113127655 - AluSx SINE Alu -3 309 1 1521 178 34 14 chr10 32461640 32461933 -113127355 - AluJb SINE Alu -13 299 1 21 0 0 0 chr10 32461984 32462005 -113127283 + AT_rich Low_complexity Low_complexity 1 21 0 2298 105 0 10 chr10 32462296 32462600 -113126688 + AluSx SINE Alu 1 301 -11 702 146 0 0 chr10 32463784 32463887 -113125401 - FRAM SINE Alu -11 165 63 3744 78 58 37 chr10 32463887 32464461 -113124827 - LTR61 LTR ERV1 -9 586 1 1073 132 15 71 chr10 32464462 32464659 -113124629 - AluJb SINE Alu -126 186 1 2183 133 0 0 chr10 32464684 32464992 -113124296 + AluSx SINE Alu 2 309 -3 2191 121 3 3 chr10 32465021 32465327 -113123961 - AluSp SINE Alu -7 306 1 1900 126 0 21 chr10 32466243 32466528 -113122760 + AluJb SINE Alu 6 284 -28 428 0 19 0 chr10 32466528 32466580 -113122708 + (CATA)n Simple_repeat Simple_repeat 2 54 0 26 0 0 0 chr10 32467546 32467572 -113121716 + AT_rich Low_complexity Low_complexity 1 26 0 2363 70 3 0 chr10 32467572 32467859 -113121429 + AluSp SINE Alu 1 288 -25 1989 113 13 10 chr10 32467859 32468161 -113121127 - AluJo SINE Alu -3 309 7 279 0 0 0 chr10 32468296 32468327 -113120961 + (GA)n Simple_repeat Simple_repeat 1 31 0 26 23 0 23 chr10 32470854 32470879 -113118409 + AT_rich Low_complexity Low_complexity 1 26 -17 2297 67 32 0 chr10 32470879 32471161 -113118127 - AluSq SINE Alu -22 291 1 26 23 0 23 chr10 32471161 32471179 -113118109 + AT_rich Low_complexity Low_complexity 26 43 0 249 237 17 0 chr10 32471905 32471964 -113117324 + U7 snRNA snRNA 3 62 -1 771 233 0 59 chr10 32472650 32472869 -113116419 - MIR SINE MIR -26 236 31 297 208 69 0 chr10 32474001 32474073 -113115215 + MIR3 SINE MIR 110 186 -22 2045 134 3 0 chr10 32474845 32475144 -113114144 + AluSx SINE Alu 1 300 -12 2374 100 0 0 chr10 32476942 32477241 -113112047 - AluSx SINE Alu -13 299 1 376 263 60 24 chr10 32478073 32478235 -113111053 - L2 LINE L2 -213 3059 2893 536 326 4 34 chr10 32478616 32478852 -113110436 - L3 LINE CR1 -1 1576 1348 546 294 87 5 chr10 32478909 32479127 -113110161 + MIR SINE MIR 13 248 -14 183 328 0 0 chr10 32479541 32479608 -113109680 + L3 LINE CR1 622 688 -889 1999 136 7 7 chr10 32479693 32479988 -113109300 + AluJb SINE Alu 2 296 -16 1649 83 5 0 chr10 32480042 32480246 -113109042 + AluSp SINE Alu 77 281 -32 207 88 0 0 chr10 32480248 32480282 -113109006 + (TAAAA)n Simple_repeat Simple_repeat 4 37 0 190 255 0 0 chr10 32480454 32480501 -113108787 + L3b LINE CR1 1186 1232 -351 504 232 144 10 chr10 32480642 32480836 -113108452 + MIR SINE MIR 31 250 -12 2238 96 0 43 chr10 32480898 32481222 -113108066 + AluSx SINE Alu 1 310 -2 204 267 59 50 chr10 32481482 32481583 -113107705 + L2 LINE L2 3169 3270 -2 761 168 0 0 chr10 32481860 32481973 -113107315 - FLAM_C SINE Alu -25 118 6 2200 125 3 0 chr10 32482038 32482341 -113106947 + AluSx SINE Alu 1 304 -8 23 33 0 0 chr10 32482494 32482524 -113106764 + AT_rich Low_complexity Low_complexity 1 30 0 446 243 0 0 chr10 32482540 32482655 -113106633 - L1ME2 LINE L1 0 6164 6053 24 0 0 0 chr10 32482671 32482695 -113106593 + AT_rich Low_complexity Low_complexity 1 24 0 741 189 0 0 chr10 32482699 32482831 -113106457 - FLAM_C SINE Alu 0 133 2 223 329 24 0 chr10 32482903 32482988 -113106300 + L2 LINE L2 3209 3295 -18 2089 112 7 3 chr10 32484195 32484528 -113104760 - AluSx SINE Alu 0 312 1 1448 245 87 32 chr10 32484560 32485022 -113104266 + L1ME3A LINE L1 5556 6042 -128 1190 123 0 0 chr10 32485034 32485205 -113104083 - AluSg/x SINE Alu -5 305 135 327 257 44 0 chr10 32485221 32485334 -113103954 + L1ME3A LINE L1 6053 6170 0 1178 132 11 6 chr10 32485430 32485604 -113103684 - AluSx SINE Alu -137 175 1 2121 116 0 35 chr10 32486595 32486906 -113102382 + AluSq SINE Alu 1 300 -13 23 33 0 0 chr10 32487390 32487420 -113101868 + AT_rich Low_complexity Low_complexity 1 30 0 202 283 0 0 chr10 32487675 32487721 -113101567 - L2 LINE L2 -17 3255 3210 1678 159 45 24 chr10 32487847 32487983 -113101305 + AluJo SINE Alu 1 133 -179 2371 84 3 0 chr10 32487983 32488279 -113101009 + AluSp SINE Alu 1 297 -16 1678 159 45 24 chr10 32488279 32488431 -113100857 + AluJo SINE Alu 133 295 -17 1757 165 23 13 chr10 32488464 32488773 -113100515 - AluSx SINE Alu 0 312 1 473 278 78 58 chr10 32488828 32489019 -113100269 - MIR SINE MIR -51 211 17 28 48 0 0 chr10 32489019 32489061 -113100227 + AT_rich Low_complexity Low_complexity 1 42 0 605 182 0 70 chr10 32489539 32489682 -113099606 + FLAM_C SINE Alu 1 133 0 554 114 44 9 chr10 32489682 32489796 -113099492 + GA-rich Low_complexity Low_complexity 3 120 0 1120 152 13 100 chr10 32490134 32490365 -113098923 + AluJo SINE Alu 85 295 -17 637 121 2 4 chr10 32491961 32492092 -113097196 - L1MB1 LINE L1 -1 6167 6053 623 167 0 0 chr10 32492501 32492597 -113096691 - FLAM_C SINE Alu -21 122 27 2288 84 0 0 chr10 32492597 32492883 -113096405 + AluSg SINE Alu 10 295 -15 27 29 0 0 chr10 32492979 32493013 -113096275 + AT_rich Low_complexity Low_complexity 1 34 0 240 147 0 0 chr10 32493662 32493696 -113095592 + Alu SINE Alu 247 280 -21 186 43 0 0 chr10 32493696 32493719 -113095569 + (T)n Simple_repeat Simple_repeat 1 23 0 605 104 52 0 chr10 32494501 32494597 -113094691 - AluSg/x SINE Alu -6 306 206 1198 130 0 0 chr10 32494620 32494789 -113094499 - AluSc SINE Alu -20 289 121 1117 72 0 0 chr10 32494937 32495075 -113094213 - AluSq/x SINE Alu -174 138 1 2425 84 0 0 chr10 32495147 32495455 -113093833 - AluSg SINE Alu -2 308 1 204 362 35 21 chr10 32495694 32495835 -113093453 + MIR3 SINE MIR 2 144 -64 207 273 18 0 chr10 32495844 32495899 -113093389 - MIR3 SINE MIR -28 180 125 555 156 55 46 chr10 32496021 32496130 -113093158 + AluJo/FLAM SINE Alu 1 110 -202 2542 50 0 0 chr10 32496130 32496427 -113092861 - AluSg SINE Alu -13 297 1 231 281 61 12 chr10 32496461 32496543 -113092745 + MLT1K LTR MaLR 313 398 -190 494 254 35 18 chr10 32496857 32497026 -113092262 - MLT1K LTR MaLR -18 570 399 989 189 92 32 chr10 32497435 32497716 -113091572 - L1MC4 LINE L1 -2 8040 7743 225 264 66 0 chr10 32497789 32497880 -113091408 - L1MC4 LINE L1 -312 7730 7634 221 386 6 43 chr10 32498123 32498286 -113091002 - L2 LINE L2 -34 3238 3082 514 274 44 9 chr10 32498847 32499065 -113090223 + L1ME1 LINE L1 5931 6161 -5 587 168 63 0 chr10 32499097 32499240 -113090048 + L1MB5 LINE L1 5179 5330 -816 2098 166 77 0 chr10 32499249 32499664 -113089624 + L1MB5 LINE L1 5587 6033 -141 792 301 93 5 chr10 32500335 32500754 -113088534 - LTR16B LTR ERVL -4 460 5 2396 68 3 7 chr10 32502494 32502801 -113086487 + AluSp SINE Alu 1 306 -7 22 35 0 0 chr10 32506083 32506112 -113083176 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr10 32506813 32506834 -113082454 + AT_rich Low_complexity Low_complexity 1 21 0 1942 139 22 27 chr10 32506937 32507273 -113082015 - L1MC/D LINE L1 -703 5630 5295 2277 100 7 0 chr10 32507273 32507582 -113081706 - AluSq SINE Alu -2 311 1 1942 139 22 27 chr10 32507582 32507612 -113081676 - L1MC/D LINE L1 -1038 5295 5266 1501 161 7 4 chr10 32507636 32507915 -113081373 - L1MA7 LINE L1 -11 6280 6001 1652 101 65 0 chr10 32507915 32508191 -113081097 - L1PA13 LINE L1 -8 6155 5860 822 287 127 19 chr10 32508628 32508997 -113080291 + MLT1I LTR MaLR 1 409 0 847 190 83 5 chr10 32509212 32509417 -113079871 - L1MD2 LINE L1 -396 5963 5743 471 167 0 0 chr10 32509561 32509651 -113079637 + T-rich Low_complexity Low_complexity 1 90 0 275 279 58 0 chr10 32510934 32511020 -113078268 + L2 LINE L2 3161 3251 -21 4562 145 55 21 chr10 32521475 32522346 -113066942 + L1MA4 LINE L1 5395 6295 -5 2331 177 24 9 chr10 32522368 32522821 -113066467 + MER4D LTR ERV1 421 880 -23 29 70 0 0 chr10 32536860 32536917 -113052371 + AT_rich Low_complexity Low_complexity 1 57 0 282 290 7 76 chr10 32538829 32538974 -113050314 + MIR SINE MIR 10 144 -118 259 317 69 0 chr10 32540429 32540530 -113048758 + MIR SINE MIR 85 192 -70 668 267 19 6 chr10 32540656 32540817 -113048471 - MIR SINE MIR -75 187 25 335 218 103 0 chr10 32541145 32541232 -113048056 - L2 LINE L2 -2 3270 3175 299 53 0 0 chr10 32545423 32545461 -113043827 + (TA)n Simple_repeat Simple_repeat 2 39 0 2161 110 0 32 chr10 32545461 32545770 -113043518 - AluSg SINE Alu -11 299 1 1866 177 0 3 chr10 32545781 32546069 -113043219 - AluJo SINE Alu -25 287 1 278 358 8 30 chr10 32546076 32546210 -113043078 - MIR3 SINE MIR -67 141 11 2300 317 61 37 chr10 32550307 32551643 -113037645 + HERVL LTR ERVL 2832 4199 -1455 1614 54 19 0 chr10 32551649 32551854 -113037434 - MER11A LTR ERVK 0 1266 1058 1733 131 0 16 chr10 32553528 32553780 -113035508 - AluJb SINE Alu -64 248 1 23 22 0 44 chr10 32553783 32553802 -113035486 + AT_rich Low_complexity Low_complexity 1 19 -24 2113 141 0 0 chr10 32553802 32554108 -113035180 + AluSx SINE Alu 1 306 -6 23 22 0 44 chr10 32554108 32554133 -113035155 + AT_rich Low_complexity Low_complexity 19 43 0 350 229 124 26 chr10 32554172 32554325 -113034963 - L1 LINE L1 -2208 3938 3771 21 57 0 0 chr10 32554442 32554477 -113034811 + AT_rich Low_complexity Low_complexity 1 35 0 361 309 104 44 chr10 32554566 32554883 -113034405 - L1 LINE L1 -2701 3445 3110 3214 17 0 0 chr10 32558184 32558732 -113030556 + L1P1 LINE L1 5014 5561 -594 332 277 54 9 chr10 32562249 32562361 -113026927 - MIR SINE MIR -113 149 33 218 256 33 56 chr10 32562443 32562483 -113026805 + MIR SINE MIR 105 144 -118 2920 147 9 9 chr10 32562483 32562911 -113026377 - MSTC LTR MaLR 0 428 1 218 256 33 56 chr10 32562911 32562960 -113026328 + MIR SINE MIR 144 192 -70 1349 76 4 44 chr10 32572327 32572552 -113016736 + HERVK9 LTR ERVK 3725 3940 -1976 2030 132 3 12 chr10 32572553 32572879 -113016409 + HERVK9 LTR ERVK 4583 4905 -1011 252 54 54 0 chr10 32572875 32572912 -113016376 - HERVK9 LTR ERVK -115 5801 5763 * 2516 69 0 3 chr10 32572913 32573216 -113016072 + AluY SINE Alu 1 302 -9 2367 92 0 16 chr10 32573370 32573686 -113015602 + AluSq SINE Alu 1 311 -2 863 130 30 0 chr10 32573690 32573821 -113015467 + AluJo SINE Alu 1 135 -177 22 0 0 0 chr10 32573821 32573843 -113015445 + AT_rich Low_complexity Low_complexity 1 22 0 3023 142 17 4 chr10 32577676 32578154 -113011134 - MER41B LTR ERV1 0 635 152 1695 105 0 13 chr10 32578154 32578393 -113010895 - AluSq SINE Alu -7 306 71 343 182 18 0 chr10 32581334 32581389 -113007899 + AluJ/FLAM SINE Alu 10 65 -237 1645 109 102 82 chr10 32585617 32585920 -113003368 - AluSx SINE Alu -3 309 1 9508 64 9 0 chr10 32588478 32589688 -112999600 - L1P LINE L1 -1145 5001 3781 2185 111 3 0 chr10 32593243 32593540 -112995748 + AluSx SINE Alu 4 301 -11 27 0 0 0 chr10 32595384 32595411 -112993877 + AT_rich Low_complexity Low_complexity 1 27 0 21 36 0 0 chr10 32599203 32599231 -112990057 + AT_rich Low_complexity Low_complexity 1 28 0 311 218 0 13 chr10 32599270 32599348 -112989940 - HAL1 LINE L1 -302 2205 2129 3517 19 0 0 chr10 32599408 32599786 -112989502 - L1PA2 LINE L1 -4 6151 5774 2244 101 3 3 chr10 32599860 32600157 -112989131 - AluSq SINE Alu -16 297 1 333 191 0 0 chr10 32600362 32600409 -112988879 + T-rich Low_complexity Low_complexity 1 47 0 601 333 67 28 chr10 32600509 32600836 -112988452 - L2 LINE L2 -941 2373 2034 2081 119 20 0 chr10 32604993 32605286 -112984002 + AluSx SINE Alu 1 299 -13 211 313 9 120 chr10 32605292 32605509 -112983779 - L2 LINE L2 -2760 554 362 1393 243 181 24 chr10 32607980 32608482 -112980806 - MER20B DNA MER1_type -182 601 21 735 270 35 11 chr10 32608526 32608700 -112980588 + MER45A DNA AcHobo 1 178 0 456 88 44 0 chr10 32613848 32613916 -112975372 - BC200 scRNA scRNA -128 72 2 261 305 80 7 chr10 32613951 32614102 -112975186 - Charlie7 DNA MER1_type -16 2596 2435 2068 160 22 8 chr10 32614553 32614909 -112974379 + L1MB8 LINE L1 5818 6178 0 341 315 151 20 chr10 32616867 32617013 -112972275 + MER5A DNA MER1_type 19 183 -6 717 214 60 45 chr10 32618490 32618691 -112970597 + MER3 DNA MER1_type 6 209 0 447 277 60 42 chr10 32618762 32618928 -112970360 - MIR SINE MIR -92 170 2 225 326 146 0 chr10 32623095 32623184 -112966104 + MIR SINE MIR 29 130 -78 236 526 0 0 chr10 32624678 32624754 -112964534 + T-rich Low_complexity Low_complexity 1 76 0 291 293 123 0 chr10 32625203 32625309 -112963979 - L2 LINE L2 -1 3271 3153 23 0 0 0 chr10 32625553 32625576 -112963712 + AT_rich Low_complexity Low_complexity 1 23 0 2873 66 11 0 chr10 32625585 32625964 -112963324 + L1PA6 LINE L1 5801 6154 0 183 233 116 0 chr10 32629994 32630037 -112959251 - L2 LINE L2 -2095 1219 1172 445 282 209 45 chr10 32632795 32633345 -112955943 - L1M2 LINE L1 -5769 1080 441 842 76 0 23 chr10 32639545 32639677 -112949611 - Harlequin LTR ERV1 -4961 1935 1807 258 263 200 0 chr10 32639683 32639763 -112949525 + LTR8 LTR ERV1 158 253 -438 2417 54 6 13 chr10 32639765 32640080 -112949208 - Harlequin LTR ERV1 -5176 1720 1408 2387 67 60 0 chr10 32640060 32640391 -112948897 - Harlequin LTR ERV1 -6283 613 263 * 2570 88 34 26 chr10 32640384 32640768 -112948520 - Harlequin LTR ERV1 -6509 387 1 1944 180 120 31 chr10 32640768 32641218 -112948070 - LTR2B LTR ERV1 0 490 1 1952 134 7 0 chr10 32641218 32641495 -112947793 - AluSx SINE Alu -33 279 1 838 107 21 0 chr10 32641538 32641678 -112947610 + (TTCC)n Simple_repeat Simple_repeat 3 145 0 280 83 0 0 chr10 32641682 32641718 -112947570 + (TC)n Simple_repeat Simple_repeat 1 36 0 2067 134 10 0 chr10 32641718 32642016 -112947272 - AluSx SINE Alu -5 307 7 180 0 0 0 chr10 32642103 32642123 -112947165 + (CA)n Simple_repeat Simple_repeat 1 20 0 1208 208 148 48 chr10 32642134 32642595 -112946693 - MER97b DNA MER1_type? -269 784 278 794 203 27 0 chr10 32642595 32642743 -112946545 + FRAM SINE Alu 2 153 -23 239 179 75 0 chr10 32642751 32642818 -112946470 - MER97c DNA MER1_type? -794 296 225 2193 106 0 0 chr10 32642818 32643133 -112946155 + AluSx SINE Alu 1 315 0 227 280 68 15 chr10 32643334 32643466 -112945822 + L2 LINE L2 2895 3033 -239 388 328 54 24 chr10 32643515 32643659 -112945629 + LTR33 LTR ERVL 20 158 -363 1937 148 7 10 chr10 32643659 32643962 -112945326 - AluJb SINE Alu -5 307 6 388 328 54 24 chr10 32643962 32644263 -112945025 + LTR33 LTR ERVL 158 512 -9 189 0 0 0 chr10 32645032 32645053 -112944235 + (TTTAA)n Simple_repeat Simple_repeat 4 24 0 1619 182 27 30 chr10 32645066 32645363 -112943925 + AluJo SINE Alu 2 297 -15 2325 97 10 0 chr10 32645391 32645689 -112943599 + AluSq SINE Alu 6 306 -7 2153 130 3 0 chr10 32645697 32645989 -112943299 + AluSg SINE Alu 1 293 -17 2288 99 0 3 chr10 32645997 32646299 -112942989 + AluY SINE Alu 1 301 -10 32298 60 2 18 chr10 32646715 32650826 -112938462 + Harlequin LTR ERV1 1913 5961 -935 640 100 36 45 chr10 32650824 32650934 -112938354 + Harlequin LTR ERV1 6788 6896 0 * 2171 162 89 33 chr10 32650935 32651393 -112937895 + LTR2B LTR ERV1 7 490 0 529 118 0 0 chr10 32651501 32651577 -112937711 + LTR2B LTR ERV1 415 490 0 1806 159 48 0 chr10 32651698 32651993 -112937295 - AluSx SINE Alu -1 311 3 3582 128 2 13 chr10 32652501 32653034 -112936254 + MER1A DNA MER1_type 1 527 0 2152 113 0 0 chr10 32653261 32653543 -112935745 - AluSx SINE Alu -17 295 14 229 26 26 26 chr10 32653778 32653817 -112935471 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 472 135 10 58 chr10 32653837 32653941 -112935347 + AluJb SINE Alu 213 311 -1 2039 124 16 19 chr10 32654154 32654461 -112934827 - AluSq SINE Alu -7 306 1 21 0 0 0 chr10 32654752 32654773 -112934515 + AT_rich Low_complexity Low_complexity 1 21 0 32 26 0 0 chr10 32654983 32655022 -112934266 + AT_rich Low_complexity Low_complexity 1 39 0 759 167 0 8 chr10 32655022 32655142 -112934146 - FLAM_C SINE Alu -13 120 2 208 247 12 12 chr10 32655195 32655276 -112934012 + (TA)n Simple_repeat Simple_repeat 1 81 0 2193 116 31 0 chr10 32655314 32655607 -112933681 + AluSx SINE Alu 1 302 -10 761 209 35 54 chr10 32655612 32655871 -112933417 + MER97c DNA MER1_type? 837 1090 0 2399 101 3 0 chr10 32656067 32656373 -112932915 - AluSp SINE Alu -6 307 1 1968 156 0 0 chr10 32656375 32656733 -112932555 - AluSx SINE Alu 0 312 1 659 183 38 23 chr10 32656733 32656864 -112932424 - AluJo/FLAM SINE Alu -169 133 1 1851 172 10 0 chr10 32657891 32658188 -112931100 + AluJb SINE Alu 1 300 -12 266 261 52 35 chr10 32658527 32658642 -112930646 + L2 LINE L2 2937 3053 -219 806 181 0 0 chr10 32658834 32658961 -112930327 + FLAM_C SINE Alu 1 127 -16 21 36 0 0 chr10 32659107 32659135 -112930153 + AT_rich Low_complexity Low_complexity 1 28 0 722 148 99 77 chr10 32659137 32659319 -112929969 - AluJo SINE Alu -5 307 122 2039 119 7 0 chr10 32659780 32660066 -112929222 + AluSx SINE Alu 14 301 -11 252 77 0 0 chr10 32661251 32661290 -112927998 + (CA)n Simple_repeat Simple_repeat 2 40 0 1156 182 5 14 chr10 32661500 32661714 -112927574 + AluJo SINE Alu 87 298 -14 2160 111 0 19 chr10 32661736 32662043 -112927245 + AluSg SINE Alu 1 301 -9 596 195 55 8 chr10 32662808 32662936 -112926352 - MER94 DNA DNA 0 134 1 185 355 124 0 chr10 32663476 32663597 -112925691 + L2 LINE L2 3137 3272 0 994 184 12 0 chr10 32663960 32664123 -112925165 + FRAM SINE Alu 1 165 -11 1457 121 0 0 chr10 32664137 32664335 -112924953 + AluSg SINE Alu 1 198 -112 605 136 0 0 chr10 32664335 32664423 -112924865 - AluS SINE Alu -224 89 2 2026 100 50 4 chr10 32665001 32665281 -112924007 - AluSg SINE Alu -17 293 1 1126 153 1 28 chr10 32665817 32666126 -112923162 + MLT1A1 LTR MaLR 1 365 0 2232 116 3 0 chr10 32666402 32666703 -112922585 + AluSx SINE Alu 1 302 -10 788 188 0 0 chr10 32667368 32667501 -112921787 - FLAM_C SINE Alu 0 133 1 196 284 248 9 chr10 32667927 32668036 -112921252 + MIR SINE MIR 20 154 -108 2430 92 0 0 chr10 32668044 32668369 -112920919 + L1PB2 LINE L1 5542 5866 -285 262 91 0 0 chr10 32668369 32668431 -112920857 - Alu SINE Alu 0 314 253 234 0 0 0 chr10 32668493 32668519 -112920769 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 655 188 7 29 chr10 32668720 32669038 -112920250 + GA-rich Low_complexity Low_complexity 1 310 0 598 134 6 52 chr10 32669043 32669215 -112920073 + (GGAA)n Simple_repeat Simple_repeat 1 164 0 324 260 19 29 chr10 32669450 32669554 -112919734 - MER112 DNA MER1_type -6 254 152 338 212 71 18 chr10 32669564 32669677 -112919611 + MER91C DNA MER1_type 1 119 -21 243 167 20 187 chr10 32669700 32669850 -112919438 - MER112 DNA MER1_type -134 126 2 338 253 11 11 chr10 32670279 32670366 -112918922 + LTR67 LTR ERVL 464 550 -7 770 131 8 8 chr10 32670643 32670765 -112918523 - AluJ SINE Alu -9 303 182 804 160 15 0 chr10 32670765 32670896 -112918392 - AluJ SINE Alu -179 133 1 692 244 42 67 chr10 32672182 32672281 -112917007 - L1PB4 LINE L1 0 6156 6056 2495 72 0 0 chr10 32672281 32672574 -112916714 - AluSg SINE Alu -17 293 1 692 244 42 67 chr10 32672574 32672712 -112916576 - L1PB4 LINE L1 -100 6056 5925 217 279 93 81 chr10 32672888 32673135 -112916153 + L2 LINE L2 2641 2890 -424 737 243 49 52 chr10 32673203 32673491 -112915797 - HAL1 LINE L1 -36 2471 2185 2038 135 0 22 chr10 32673533 32673851 -112915437 + AluJo SINE Alu 1 311 -1 304 252 126 0 chr10 32673862 32673965 -112915323 - HAL1 LINE L1 -321 2186 2071 661 144 0 0 chr10 32673986 32674083 -112915205 + FLAM_A SINE Alu 30 126 -16 2308 110 0 0 chr10 32674085 32674377 -112914911 + AluSx SINE Alu 1 292 -20 182 348 54 0 chr10 32674859 32674971 -112914317 + MIR SINE MIR 128 245 -17 735 255 30 5 chr10 32675001 32675201 -112914087 + MIR SINE MIR 23 227 -35 1643 174 54 3 chr10 32675221 32675515 -112913773 + AluJb SINE Alu 2 310 -2 207 0 0 0 chr10 32675931 32675954 -112913334 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2092 103 59 0 chr10 32676406 32676696 -112912592 - AluSx SINE Alu -5 307 1 1841 157 7 3 chr10 32676712 32677029 -112912259 - AluJo SINE Alu 0 318 1 1145 114 0 40 chr10 32677180 32677355 -112911933 + AluSg/x SINE Alu 135 302 -8 2285 103 0 0 chr10 32677869 32678161 -112911127 - AluSx SINE Alu -20 292 1 261 284 0 0 chr10 32678755 32678822 -112910466 + MIR SINE MIR 36 102 -160 2055 121 9 35 chr10 32678929 32679244 -112910044 + AluSx SINE Alu 3 309 -3 525 244 28 50 chr10 32679251 32679431 -112909857 + L1MC5 LINE L1 7733 7908 -53 212 167 0 0 chr10 32679543 32679585 -112909703 + T-rich Low_complexity Low_complexity 1 42 0 281 353 0 8 chr10 32680170 32680303 -112908985 - MER117 DNA MER1_type -65 132 1 182 184 0 0 chr10 32680315 32680353 -112908935 - MIR SINE MIR -122 140 103 718 222 0 0 chr10 32680669 32680795 -112908493 - FLAM_C SINE Alu -16 127 2 2189 144 0 3 chr10 32680830 32681143 -112908145 - AluSx SINE Alu 0 312 1 180 176 0 0 chr10 32681204 32681238 -112908050 + CT-rich Low_complexity Low_complexity 2 35 0 1904 139 43 0 chr10 32681255 32681536 -112907752 + AluJb SINE Alu 1 293 -19 276 231 144 70 chr10 32681679 32681908 -112907380 + L2 LINE L2 2917 3162 -110 2282 86 0 0 chr10 32681928 32682206 -112907082 + AluSx SINE Alu 22 299 -13 1657 192 14 11 chr10 32682272 32682419 -112906869 - AluJo SINE Alu -24 288 138 1491 117 0 45 chr10 32682419 32682641 -112906647 - AluSq SINE Alu -101 212 1 1657 192 14 11 chr10 32682641 32682780 -112906508 - AluJo SINE Alu -174 138 1 402 307 43 50 chr10 32682816 32683003 -112906285 - L1M4 LINE L1 -1672 4474 4288 2038 135 20 0 chr10 32683003 32683299 -112905989 + AluJb SINE Alu 1 302 -10 402 307 43 50 chr10 32683299 32683411 -112905877 - L1M4 LINE L1 -1858 4288 4177 34 42 0 0 chr10 32683413 32683461 -112905827 + AT_rich Low_complexity Low_complexity 1 48 0 1610 161 4 8 chr10 32683468 32683728 -112905560 - AluJb SINE Alu -49 263 5 254 352 48 14 chr10 32683735 32683880 -112905408 - L1M4 LINE L1 -1963 4183 4034 537 299 112 20 chr10 32684211 32684515 -112904773 + ERVL LTR ERVL 1051 1382 -3614 289 307 111 26 chr10 32684635 32684788 -112904500 + ERVL LTR ERVL 1585 1750 -3246 22 0 0 0 chr10 32684796 32684818 -112904470 + AT_rich Low_complexity Low_complexity 1 22 0 675 191 0 0 chr10 32684818 32684933 -112904355 - FLAM_A SINE Alu -18 115 1 291 350 85 17 chr10 32684942 32685119 -112904169 + ERVL LTR ERVL 1769 1957 -3697 336 293 46 71 chr10 32685193 32685278 -112904010 + ERVL LTR ERVL 3895 3981 -1673 2197 116 3 7 chr10 32685278 32685580 -112903708 - AluSx SINE Alu -11 301 1 336 293 46 71 chr10 32685580 32685758 -112903530 + ERVL LTR ERVL 3981 4161 -1493 607 316 18 0 chr10 32685770 32685941 -112903347 + ERVL LTR ERVL 2096 2269 -3495 678 329 17 8 chr10 32685970 32686207 -112903081 + ERVL LTR ERVL 2345 2583 -3181 255 355 0 7 chr10 32686774 32686926 -112902362 + (CCA)n Simple_repeat Simple_repeat 2 152 0 2007 158 0 3 chr10 32687038 32687336 -112901952 - AluSx SINE Alu -15 297 1 1358 196 4 8 chr10 32688011 32688276 -112901012 + L1MB3 LINE L1 4700 4963 -1183 3102 131 327 32 chr10 32688278 32688996 -112900292 - MER21A LTR ERV1 -1 930 1 376 157 56 74 chr10 32688996 32689041 -112900247 + L1MB3 LINE L1 4960 5004 -1142 2164 121 0 7 chr10 32689041 32689346 -112899942 + AluSq SINE Alu 1 303 -10 376 157 56 74 chr10 32689346 32689408 -112899880 + L1MB3 LINE L1 5004 5065 -1081 4760 143 13 36 chr10 32689425 32689891 -112899397 + L1MB3 LINE L1 5304 5742 -441 2151 126 0 16 chr10 32689891 32690065 -112899223 - AluSg SINE Alu -5 305 137 2192 82 7 7 chr10 32690065 32690358 -112898930 - AluY SINE Alu -18 293 1 2151 126 0 16 chr10 32690358 32690493 -112898795 - AluSg SINE Alu -173 137 1 4760 143 13 36 chr10 32690493 32690877 -112898411 + L1MB3 LINE L1 5742 6134 -49 644 140 0 0 chr10 32690877 32690970 -112898318 - FRAM SINE Alu -28 148 56 6155 107 164 16 chr10 32691109 32692173 -112897115 + MER11B LTR ERVK 1 1222 -14 2264 112 0 0 chr10 32692178 32692474 -112896814 - AluSx SINE Alu -16 296 1 535 139 0 0 chr10 32692655 32692734 -112896554 - AluSx SINE Alu -12 300 222 1263 85 0 0 chr10 32692751 32692904 -112896384 - AluSx SINE Alu -159 153 1 2162 106 0 3 chr10 32692960 32693242 -112896046 + AluSc SINE Alu 1 281 -28 309 43 22 0 chr10 32693242 32693288 -112896000 + (TAAA)n Simple_repeat Simple_repeat 2 80 0 494 222 24 16 chr10 32693608 32693734 -112895554 + AluSq/x SINE Alu 19 145 -167 598 202 0 8 chr10 32693736 32693860 -112895428 + AluY SINE Alu 189 311 0 1009 141 0 33 chr10 32693860 32694044 -112895244 + AluSx SINE Alu 121 298 -14 208 143 0 0 chr10 32694252 32694287 -112895001 + (T)n Simple_repeat Simple_repeat 1 35 0 303 323 133 31 chr10 32694485 32694680 -112894608 - MIR SINE MIR 0 262 48 2101 105 0 3 chr10 32695017 32695312 -112893976 + AluSx SINE Alu 1 294 -18 256 230 95 40 chr10 32695439 32695513 -112893775 + MER45C DNA AcHobo 1 78 -875 850 207 21 21 chr10 32695581 32695774 -112893514 - AluJb SINE Alu -3 309 117 328 274 177 18 chr10 32695774 32695887 -112893401 + MER45C DNA AcHobo 141 271 -682 2063 134 0 0 chr10 32695971 32696292 -112892996 + AluSx SINE Alu 1 312 0 427 212 121 10 chr10 32696389 32696488 -112892800 + L2 LINE L2 3204 3313 0 2179 125 0 0 chr10 32696669 32696972 -112892316 - AluSx SINE Alu -9 303 1 2339 97 3 0 chr10 32696973 32697293 -112891995 - L1PA13 LINE L1 -467 5696 5376 3553 73 11 0 chr10 32697293 32697750 -112891538 + L1PA13 LINE L1 5692 6163 0 255 305 35 64 chr10 32698428 32698569 -112890719 + L3b LINE CR1 1230 1366 -217 26 0 0 0 chr10 32698580 32698606 -112890682 + AT_rich Low_complexity Low_complexity 1 26 0 1224 176 38 109 chr10 32698621 32698934 -112890354 - AluJo SINE Alu -21 291 1 224 312 43 11 chr10 32699036 32699129 -112890159 - L2 LINE L2 -4 3309 3214 236 277 67 25 chr10 32699249 32699368 -112889920 + L1MEd LINE L1 3 126 -5993 207 0 0 0 chr10 32699697 32699720 -112889568 + (CA)n Simple_repeat Simple_repeat 2 24 0 1341 128 5 0 chr10 32699790 32699993 -112889295 + AluSq SINE Alu 103 306 -7 312 254 89 83 chr10 32700107 32700276 -112889012 + L1MEd LINE L1 523 692 -5427 2134 104 0 3 chr10 32700276 32700573 -112888715 + AluSc SINE Alu 1 296 -13 386 245 96 59 chr10 32700596 32700918 -112888370 + L1MEd LINE L1 873 1206 -4913 1605 175 28 0 chr10 32700920 32701206 -112888082 + AluJb SINE Alu 1 294 -18 1346 157 0 0 chr10 32701206 32701422 -112887866 + AluSp SINE Alu 2 217 -96 2037 112 7 3 chr10 32701495 32701791 -112887497 + AluSq SINE Alu 1 297 -16 260 305 8 39 chr10 32701809 32701937 -112887351 + HAL1 LINE L1 1449 1572 -935 2107 89 0 26 chr10 32702169 32702471 -112886817 - AluSq SINE Alu -19 294 1 2140 112 0 0 chr10 32702472 32702766 -112886522 - AluSx SINE Alu -18 294 1 372 225 25 0 chr10 32703746 32703826 -112885462 - MER5B DNA MER1_type -73 105 24 655 192 0 32 chr10 32703833 32703958 -112885330 + MER77 LTR ERV1 1 121 -484 2031 112 3 0 chr10 32703961 32704256 -112885032 - AluSx SINE Alu -16 296 1 21 0 0 0 chr10 32704353 32704374 -112884914 + AT_rich Low_complexity Low_complexity 1 21 0 1971 136 0 3 chr10 32705242 32705543 -112883745 - AluSx SINE Alu -12 300 1 763 193 0 36 chr10 32705629 32705795 -112883493 - AluJb SINE Alu -9 303 144 1564 118 169 0 chr10 32706267 32706522 -112882766 + AluSx SINE Alu 1 298 -4 1904 138 0 13 chr10 32706665 32706969 -112882319 - AluSx SINE Alu -12 300 1 284 355 28 57 chr10 32707037 32707319 -112881969 + L2 LINE L2 2596 2869 -445 227 339 119 9 chr10 32707380 32707489 -112881799 + L2 LINE L2 2948 3068 -204 1831 53 4 4 chr10 32707806 32708034 -112881254 - AluSg/x SINE Alu -13 297 70 1894 132 7 7 chr10 32708084 32708379 -112880909 - AluJb SINE Alu -16 296 2 208 328 0 0 chr10 32708464 32708531 -112880757 - L3 LINE CR1 -889 688 622 * 233 362 102 39 chr10 32708522 32708903 -112880385 + L3 LINE CR1 880 1284 -293 2284 77 3 3 chr10 32709438 32709737 -112879551 + AluSx SINE Alu 1 299 -13 23 33 0 0 chr10 32710221 32710251 -112879037 + AT_rich Low_complexity Low_complexity 1 30 0 218 283 0 0 chr10 32710506 32710552 -112878736 - L2 LINE L2 -17 3255 3210 825 164 0 0 chr10 32710678 32710806 -112878482 + FLAM_C SINE Alu 1 128 -5 2072 116 0 3 chr10 32710814 32711107 -112878181 + AluSx SINE Alu 1 292 -20 920 156 13 118 chr10 32712088 32712325 -112876963 + AluJo SINE Alu 85 296 -16 685 122 2 4 chr10 32713921 32714054 -112875234 - L1MB1 LINE L1 -1 6167 6051 635 154 0 132 chr10 32714462 32714558 -112874730 - FLAM_C SINE Alu -190 122 48 2168 91 0 0 chr10 32714558 32714843 -112874445 + AluSg SINE Alu 10 294 -16 635 154 0 132 chr10 32714843 32714882 -112874406 - FLAM_C SINE Alu -264 48 5 887 172 197 5 chr10 32715448 32715651 -112873637 - AluSq SINE Alu -71 242 1 1750 173 0 10 chr10 32716538 32716844 -112872444 + AluJo SINE Alu 1 303 -9 2192 106 0 0 chr10 32717587 32717888 -112871400 - AluSx SINE Alu -11 301 1 1545 173 0 22 chr10 32719801 32720079 -112869209 + AluJb SINE Alu 21 292 -20 424 274 31 88 chr10 32720279 32720505 -112868783 - MIR SINE MIR -29 233 21 606 143 76 0 chr10 32720584 32720689 -112868599 + MER69A DNA AcHobo 1 113 -64 1009 176 98 25 chr10 32720689 32720835 -112868453 - L1PB3 LINE L1 -7 6147 5980 2102 112 0 20 chr10 32720835 32721140 -112868148 - AluSx SINE Alu -13 299 1 1009 176 98 25 chr10 32721140 32721197 -112868091 - L1PB3 LINE L1 -174 5980 5929 1648 105 0 0 chr10 32721357 32721585 -112867703 - AluSg/x SINE Alu 0 310 83 1203 178 23 0 chr10 32721931 32722150 -112867138 + AluJo SINE Alu 86 309 -3 192 151 170 38 chr10 32722897 32722950 -112866338 - L3 LINE CR1 -144 1433 1374 2060 103 0 13 chr10 32723128 32723429 -112865859 + AluSq SINE Alu 2 298 -15 3143 166 23 27 chr10 32723542 32724199 -112865089 - L1 LINE L1 -1280 4866 4213 1678 161 13 13 chr10 32725185 32725490 -112863798 + AluJo SINE Alu 1 305 -7 1704 110 100 4 chr10 32726132 32726413 -112862875 - AluSq SINE Alu -5 308 1 2186 113 0 0 chr10 32726493 32726794 -112862494 - AluSx SINE Alu -11 301 1 1534 168 20 37 chr10 32726797 32726984 -112862304 - AluJo SINE Alu -20 292 110 2142 121 0 0 chr10 32726984 32727281 -112862007 + AluSg SINE Alu 1 297 -13 1534 168 20 37 chr10 32727281 32727390 -112861898 - AluJo SINE Alu -202 110 1 205 274 14 41 chr10 32727512 32727585 -112861703 + MIR3 SINE MIR 125 195 -13 198 362 35 21 chr10 32727576 32727717 -112861571 - MIR3 SINE MIR -64 144 2 * 2265 91 3 0 chr10 32727956 32728263 -112861025 + AluSg SINE Alu 1 308 -2 1908 129 0 0 chr10 32728418 32728690 -112860598 + AluSx SINE Alu 1 272 -40 1436 197 41 55 chr10 32728791 32729157 -112860131 + MLT1B LTR MaLR 30 390 0 484 313 33 62 chr10 32729227 32729595 -112859693 + MLT1K LTR MaLR 226 582 -6 2140 74 0 21 chr10 32730682 32730965 -112858323 - AluSg SINE Alu -24 286 10 628 167 0 0 chr10 32730965 32731061 -112858227 + FLAM_C SINE Alu 27 122 -21 2131 120 0 7 chr10 32732565 32732873 -112856415 - AluSx SINE Alu -6 306 1 1723 85 162 4 chr10 32733073 32733332 -112855956 + AluSg SINE Alu 1 300 0 445 266 5 43 chr10 32733342 32733526 -112855762 + AluSg/x SINE Alu 121 297 -15 1442 153 9 123 chr10 32734368 32734708 -112854580 + AluJo SINE Alu 2 302 0 2174 105 3 3 chr10 32734882 32735188 -112854100 - AluSx SINE Alu -6 306 1 262 86 0 0 chr10 32735601 32735636 -112853652 - U2 snRNA snRNA -153 35 1 492 170 75 21 chr10 32735713 32735807 -112853481 + MER50 LTR ERV1 1 99 -635 930 93 0 0 chr10 32735807 32735957 -112853331 - AluSg/x SINE Alu 0 301 152 2147 85 3 31 chr10 32735975 32736293 -112852995 - AluSp SINE Alu -4 309 1 3799 131 45 3 chr10 32736295 32736890 -112852398 + MER50 LTR ERV1 92 711 -23 281 218 0 0 chr10 32736956 32737011 -112852277 - L1MC5 LINE L1 -90 7871 7817 499 263 56 33 chr10 32737019 32737232 -112852056 - L1ME3A LINE L1 -5 6165 5948 51 42 0 0 chr10 32737336 32737408 -112851880 + AT_rich Low_complexity Low_complexity 1 72 0 1346 145 0 9 chr10 32737415 32737636 -112851652 + AluJo SINE Alu 71 289 -23 318 222 101 95 chr10 32737641 32737830 -112851458 - L1MC5 LINE L1 -263 7698 7509 245 258 0 0 chr10 32738160 32738222 -112851066 + L2 LINE L2 2990 3051 -221 2059 112 0 0 chr10 32738327 32738613 -112850675 - AluSx SINE Alu -26 286 1 228 333 0 0 chr10 32738668 32738737 -112850551 + L2 LINE L2 3242 3310 -3 2041 125 3 28 chr10 32738823 32739143 -112850145 - AluSx SINE Alu 0 312 1 24 32 0 0 chr10 32739338 32739369 -112849919 + AT_rich Low_complexity Low_complexity 1 31 0 1967 131 20 0 chr10 32739457 32739817 -112849471 + AluSx SINE Alu 1 312 0 350 240 162 48 chr10 32740203 32740393 -112848895 - MLT1H LTR MaLR 0 549 345 1286 148 8 30 chr10 32740397 32740462 -112848826 + AluSg/x SINE Alu 70 135 -175 2016 116 3 0 chr10 32740462 32740772 -112848516 + AluSq SINE Alu 2 312 0 1286 148 8 30 chr10 32740772 32740942 -112848346 + AluSg/x SINE Alu 135 301 -9 239 182 0 0 chr10 32740942 32740986 -112848302 + L1MC3 LINE L1 7144 7187 -598 1773 202 9 12 chr10 32741033 32741375 -112847913 + L1MC3 LINE L1 7175 7515 -270 578 126 42 11 chr10 32741378 32741473 -112847815 + AluJ/FLAM SINE Alu 2 99 -213 1310 178 119 7 chr10 32741540 32741809 -112847479 + AluJo SINE Alu 1 299 -13 965 174 6 0 chr10 32741810 32741977 -112847311 + L1MC3 LINE L1 7510 7677 -108 1753 149 7 3 chr10 32742226 32742508 -112846780 - AluJb SINE Alu -29 283 1 925 127 35 12 chr10 32742658 32742831 -112846457 - Charlie3 DNA MER1_type -18 2692 2516 209 213 49 0 chr10 32742883 32742944 -112846344 + (TA)n Simple_repeat Simple_repeat 1 64 0 2603 128 50 26 chr10 32742953 32743070 -112846218 - MER1A DNA MER1_type -2269 433 320 2896 149 68 52 chr10 32743070 32743543 -112845745 + LTR9 LTR ERV1 1 488 -124 2343 108 0 0 chr10 32743543 32743849 -112845439 - AluSx SINE Alu -6 306 1 2896 149 68 52 chr10 32743849 32743977 -112845311 + LTR9 LTR ERV1 488 612 0 2603 128 50 26 chr10 32743977 32744282 -112845006 - MER1A DNA MER1_type -2382 320 1 1312 158 83 142 chr10 32744396 32744890 -112844398 + MER4C LTR ERV1 1 465 0 24 0 0 0 chr10 32745762 32745786 -112843502 + AT_rich Low_complexity Low_complexity 1 24 0 195 42 0 0 chr10 32745795 32745819 -112843469 + (TTA)n Simple_repeat Simple_repeat 1 24 0 826 138 0 46 chr10 32745819 32745949 -112843339 - FLAM_C SINE Alu -19 124 1 2085 130 3 0 chr10 32745953 32746245 -112843043 - AluSq SINE Alu -20 293 1 226 229 48 57 chr10 32746346 32746451 -112842837 - HAL1b LINE L1 -12 1336 1233 1917 163 0 13 chr10 32746531 32746837 -112842451 - 7SLRNA srpRNA srpRNA -14 306 5 346 176 0 0 chr10 32746837 32746888 -112842400 - FRAM/FAM SINE Alu -117 49 1 2199 117 10 0 chr10 32747408 32747698 -112841590 - AluSx SINE Alu -19 293 1 758 181 0 0 chr10 32747856 32747983 -112841305 + FLAM_A SINE Alu 1 127 -6 367 285 8 16 chr10 32748088 32748234 -112841054 + FRAM SINE Alu 25 153 -13 2136 106 51 0 chr10 32748406 32748698 -112840590 - AluSx SINE Alu -5 307 1 213 141 16 47 chr10 32748749 32748813 -112840475 + CT-rich Low_complexity Low_complexity 4 65 0 1505 239 42 13 chr10 32748823 32749275 -112840013 - L1MC5 LINE L1 -493 7468 7004 2153 106 7 3 chr10 32749573 32749865 -112839423 - AluSc SINE Alu -16 293 1 234 286 54 18 chr10 32749866 32749978 -112839310 - MIR SINE MIR -115 147 32 284 314 0 20 chr10 32750123 32750225 -112839063 + L2 LINE L2 2595 2694 -620 2156 309 67 77 chr10 32750277 32752833 -112836455 + HERVI LTR ERV1 5128 7656 -129 4199 197 51 18 chr10 32753806 32754629 -112834659 - L1MB8 LINE L1 -5 6173 5379 1663 167 4 18 chr10 32754629 32754904 -112834384 - AluJb SINE Alu -12 300 30 4199 197 51 18 chr10 32754904 32755255 -112834033 - L1MB8 LINE L1 -799 5379 5041 1720 167 3 39 chr10 32755255 32755425 -112833863 - AluJb SINE Alu -16 296 140 2329 122 0 0 chr10 32755425 32755737 -112833551 - AluSx SINE Alu 0 312 1 1720 167 3 39 chr10 32755737 32755871 -112833417 - AluJb SINE Alu -172 140 3 4199 197 51 18 chr10 32755871 32756392 -112832896 - L1MB8 LINE L1 -1137 5041 4425 924 154 0 0 chr10 32756392 32756535 -112832753 - FRAM SINE Alu -6 170 28 1790 178 3 3 chr10 32756571 32756863 -112832425 + AluJb SINE Alu 1 292 -20 23 33 0 0 chr10 32756863 32756893 -112832395 + AT_rich Low_complexity Low_complexity 1 30 0 2248 123 0 0 chr10 32756946 32757255 -112832033 - AluSx SINE Alu -3 309 1 1688 208 46 3 chr10 32757256 32757607 -112831681 - L1MC1 LINE L1 -9 6324 5959 4292 240 14 6 chr10 32757623 32758679 -112830609 - L1MC1 LINE L1 -1011 5135 4071 277 258 22 11 chr10 32758677 32758766 -112830522 - L1MB8 LINE L1 -1762 4384 4295 * 2004 146 3 13 chr10 32759015 32759330 -112829958 - AluSx SINE Alu 0 312 1 1938 156 32 51 chr10 32759548 32759606 -112829682 + MLT1A1 LTR MaLR 1 59 -306 2342 99 0 0 chr10 32759606 32759899 -112829389 + AluSc SINE Alu 1 293 -16 1938 156 32 51 chr10 32759899 32760212 -112829076 + MLT1A1 LTR MaLR 59 365 0 1168 118 72 5 chr10 32760495 32760690 -112828598 + MER83C LTR ERV1 2 209 -164 281 205 36 12 chr10 32760812 32760895 -112828393 - MER53 DNA DNA -82 107 23 * 319 195 37 0 chr10 32760825 32760907 -112828381 + MER53 DNA DNA 105 189 0 293 241 25 0 chr10 32761269 32761348 -112827940 - MIR3 SINE MIR -34 174 94 911 177 23 23 chr10 32761404 32761579 -112827709 + LTR9 LTR ERV1 438 612 0 1288 72 0 6 chr10 32761590 32761756 -112827532 + MER41-int LTR ERV1 4838 5002 -944 607 178 10 0 chr10 32761758 32761859 -112827429 + MSTD LTR MaLR 246 347 -49 601 203 45 38 chr10 32762269 32762402 -112826886 - MER20 DNA MER1_type -36 183 50 717 128 4 0 chr10 32762402 32762519 -112826769 + L1PB4 LINE L1 5685 5789 -367 25 65 0 0 chr10 32762525 32762571 -112826717 + AT_rich Low_complexity Low_complexity 1 46 0 278 126 50 44 chr10 32762578 32762737 -112826551 + (TATAA)n Simple_repeat Simple_repeat 5 164 0 30 69 0 20 chr10 32762744 32762808 -112826480 + AT_rich Low_complexity Low_complexity 1 65 -34 2318 146 13 5 chr10 32762808 32763185 -112826103 + L1PB4 LINE L1 5776 6155 -1 1884 157 0 10 chr10 32763193 32763486 -112825802 + AluSx SINE Alu 1 290 -22 30 69 0 20 chr10 32763486 32763513 -112825775 + AT_rich Low_complexity Low_complexity 72 99 0 639 157 0 0 chr10 32763520 32763622 -112825666 + FRAM SINE Alu 1 101 -75 21 0 0 0 chr10 32763629 32763650 -112825638 + AT_rich Low_complexity Low_complexity 1 21 0 1986 139 41 0 chr10 32764779 32765074 -112824214 + AluSg SINE Alu 1 307 -3 22 0 0 0 chr10 32765085 32765107 -112824181 + AT_rich Low_complexity Low_complexity 1 22 0 1182 141 77 56 chr10 32765507 32765706 -112823582 - L1PB4 LINE L1 -1 6155 5949 1698 163 71 0 chr10 32765706 32765988 -112823300 - AluJb SINE Alu -10 302 1 1182 141 77 56 chr10 32765988 32766022 -112823266 - L1PB4 LINE L1 -207 5949 5917 838 207 224 46 chr10 32766319 32766592 -112822696 + L1MC4 LINE L1 6888 7238 -804 2395 78 3 3 chr10 32766592 32766888 -112822400 + AluSc SINE Alu 1 296 -13 838 207 224 46 chr10 32766888 32766962 -112822326 + L1MC4 LINE L1 7238 7297 -745 722 229 6 22 chr10 32766962 32767145 -112822143 - AluJb SINE Alu -3 309 130 280 176 163 0 chr10 32767544 32767633 -112821655 - MIR SINE MIR -58 150 46 202 266 0 31 chr10 32768826 32768890 -112820398 + (CATA)n Simple_repeat Simple_repeat 2 63 0 1138 140 0 0 chr10 32769109 32769273 -112820015 + FRAM SINE Alu 1 164 -12 207 281 0 16 chr10 32769636 32769700 -112819588 + L2 LINE L2 3206 3268 -4 1079 151 6 0 chr10 32769870 32770036 -112819252 - FRAM SINE Alu -9 167 1 263 216 20 0 chr10 32770051 32770102 -112819186 - MERVL LTR ERVL -2713 2772 2721 * 688 264 110 35 chr10 32770100 32770327 -112818961 - MERVL LTR ERVL -3445 2319 2076 3031 88 20 5 chr10 32770334 32770732 -112818556 + MLT2A1 LTR ERVL 1 404 -40 288 186 0 0 chr10 32770742 32770801 -112818487 + (CA)n Simple_repeat Simple_repeat 2 60 0 433 55 0 0 chr10 32770805 32770860 -112818428 + MLT2A1 LTR ERVL 399 453 0 976 316 29 33 chr10 32770922 32771458 -112817830 - MERVL LTR ERVL -3052 1944 1346 274 289 13 0 chr10 32771792 32771868 -112817420 - MER116 DNA Mariner 0 80 4 899 130 0 15 chr10 32772003 32772134 -112817154 + FLAM_C SINE Alu 5 133 0 2276 113 0 10 chr10 32772649 32772951 -112816337 + AluSx SINE Alu 1 299 -13 227 257 46 55 chr10 32773202 32773311 -112815977 + L2 LINE L2 2867 2974 -339 325 277 22 51 chr10 32773410 32773547 -112815741 + MIR SINE MIR 93 225 -37 317 248 152 29 chr10 32773572 32773677 -112815611 - MIR3 SINE MIR -15 193 76 2532 67 0 3 chr10 32774712 32775012 -112814276 + AluSp SINE Alu 3 301 -12 506 284 22 11 chr10 32775093 32775276 -112814012 + MIR SINE MIR 8 192 -70 1289 172 13 0 chr10 32775284 32775511 -112813777 - MER83C LTR ERV1 0 373 144 847 169 14 0 chr10 32775611 32775759 -112813529 - AluJb SINE Alu -10 302 153 2036 76 0 4 chr10 32776045 32776340 -112812948 + AluSq SINE Alu 35 328 0 326 307 114 0 chr10 32777317 32777457 -112811831 + MIR SINE MIR 60 215 -47 1900 150 10 19 chr10 32777595 32777902 -112811386 - AluJo SINE Alu -8 304 1 367 265 38 30 chr10 32778470 32778602 -112810686 - MIR SINE MIR -113 149 17 373 282 35 33 chr10 32778763 32778926 -112810362 - MIR SINE MIR -62 146 16 2007 139 4 0 chr10 32779545 32779864 -112809424 - AluSx SINE Alu 0 320 1 2254 223 42 8 chr10 32780401 32780899 -112808389 + LTR40a LTR ERVL 4 518 -1 2130 125 0 0 chr10 32781347 32781651 -112807637 - AluSg SINE Alu 0 304 1 518 209 22 50 chr10 32781655 32781794 -112807494 + Charlie1b DNA MER1_type 86 220 -303 405 278 160 7 chr10 32782098 32782242 -112807046 + MIR SINE MIR 20 185 -77 473 265 116 43 chr10 32782342 32782644 -112806644 - L3 LINE CR1 -84 1493 1170 2236 108 0 0 chr10 32783781 32784078 -112805210 - AluSx SINE Alu -15 297 1 369 43 0 0 chr10 32784549 32784596 -112804692 + (TC)n Simple_repeat Simple_repeat 2 48 0 1921 103 48 15 chr10 32784598 32784899 -112804389 - AluSx SINE Alu 0 310 1 32 81 0 0 chr10 32785059 32785133 -112804155 + AT_rich Low_complexity Low_complexity 1 74 0 827 210 0 22 chr10 32785227 32785408 -112803880 + FRAM SINE Alu 1 176 0 2572 77 0 0 chr10 32785413 32785724 -112803564 + AluY SINE Alu 1 311 0 1826 127 10 41 chr10 32785810 32786102 -112803186 + AluSx SINE Alu 5 287 -25 626 195 26 77 chr10 32786216 32786411 -112802877 + L1MC5 LINE L1 6730 6914 -1047 2227 113 0 7 chr10 32786420 32786720 -112802568 + AluSx SINE Alu 1 298 -14 412 202 135 0 chr10 32786760 32786864 -112802424 + MIR SINE MIR 144 261 -1 1123 45 0 8 chr10 32787248 32787380 -112801908 + AluSq/x SINE Alu 1 131 -181 829 166 0 7 chr10 32788314 32788453 -112800835 + FLAM_C SINE Alu 5 142 -1 373 354 0 0 chr10 32788480 32788607 -112800681 - MER20B DNA MER1_type -528 255 129 327 310 51 19 chr10 32788773 32788931 -112800357 - MIR SINE MIR -71 191 29 6496 91 37 1 chr10 32789908 32790857 -112798431 + L1PA11 LINE L1 5191 6172 -2 22 0 0 0 chr10 32791526 32791548 -112797740 + AT_rich Low_complexity Low_complexity 1 22 0 1854 151 6 31 chr10 32791843 32792162 -112797126 - AluJb SINE Alu -1 311 1 203 282 45 90 chr10 32792501 32792588 -112796700 - MIR3 SINE MIR -42 166 88 2831 111 46 14 chr10 32792588 32793020 -112796268 + MER83 LTR ERV1 3 448 0 203 282 45 90 chr10 32793020 32793088 -112796200 - MIR3 SINE MIR -120 88 18 1466 291 98 20 chr10 32793434 32793666 -112795622 + L2 LINE L2 1892 2105 -1209 1218 165 102 133 chr10 32793666 32794146 -112795142 + MER4C LTR ERV1 1 465 0 1466 291 98 20 chr10 32794146 32794744 -112794544 + L2 LINE L2 2105 2786 -528 419 278 71 66 chr10 32795129 32795327 -112793961 + L2 LINE L2 3112 3310 -3 2279 121 0 0 chr10 32795342 32795647 -112793641 - AluSx SINE Alu 0 312 1 1348 259 74 22 chr10 32795846 32796305 -112792983 + MLT1F LTR MaLR 60 542 0 237 277 42 42 chr10 32796316 32796435 -112792853 - MIR SINE MIR -105 157 39 274 362 0 0 chr10 32799427 32799532 -112789756 + L2 LINE L2 2260 2364 -950 218 235 198 0 chr10 32799535 32799616 -112789672 + L2 LINE L2 3170 3266 -6 2422 158 44 17 chr10 32799731 32800207 -112789081 + L1PB3 LINE L1 5660 6148 -6 979 196 108 49 chr10 32800345 32800631 -112788657 - AluSp SINE Alu 0 303 1 1226 88 35 0 chr10 32800631 32800801 -112788487 - LTR39 LTR ERV1 -607 176 1 2115 110 7 0 chr10 32801179 32801469 -112787819 + AluSg SINE Alu 11 302 -8 2078 98 0 62 chr10 32801778 32802083 -112787205 - AluSx SINE Alu -24 288 3 1097 201 87 84 chr10 32802406 32802424 -112786864 + LTR37B LTR ERV1 3 19 -449 1664 133 65 34 chr10 32802424 32802718 -112786570 + AluJo SINE Alu 3 305 -7 1097 201 87 84 chr10 32802718 32803161 -112786127 + LTR37B LTR ERV1 19 465 -3 1718 169 7 33 chr10 32803324 32803631 -112785657 - AluJo SINE Alu -13 299 1 2386 120 31 11 chr10 32803806 32804163 -112785125 - THE1B LTR MaLR 0 364 1 275 311 22 0 chr10 32804238 32804328 -112784960 - MER5B DNA MER1_type -4 174 83 1209 112 19 0 chr10 32804354 32804515 -112784773 - AluSg/x SINE Alu -15 297 134 2053 91 66 3 chr10 32804515 32804801 -112784487 - AluY SINE Alu -7 304 1 218 279 0 0 chr10 32804802 32804863 -112784425 + MER5B DNA MER1_type 116 176 -2 261 222 0 0 chr10 32805325 32805379 -112783909 + C-rich Low_complexity Low_complexity 4 57 0 974 163 6 12 chr10 32806214 32806386 -112782902 - FRAM SINE Alu -10 166 1 210 254 113 0 chr10 32806471 32806542 -112782746 - MIR SINE MIR -108 154 76 2375 77 10 10 chr10 32806775 32807074 -112782214 - AluSq SINE Alu -14 299 1 1548 202 0 14 chr10 32807828 32808105 -112781183 - AluJb SINE Alu -39 273 1 209 336 67 0 chr10 32808480 32808599 -112780689 + MIR SINE MIR 80 206 -56 1921 152 3 7 chr10 32808711 32809001 -112780287 - AluJo SINE Alu -23 289 1 215 261 70 52 chr10 32809008 32809123 -112780165 - L2 LINE L2 -16 3297 3181 1391 89 26 0 chr10 32809882 32810072 -112779216 + MER30 DNA MER1_type 1 195 -35 1926 75 0 4 chr10 32810218 32810470 -112778818 + L1PA8 LINE L1 5805 6055 -117 771 164 0 0 chr10 32810474 32810590 -112778698 - FLAM_C SINE Alu -22 121 6 1640 138 99 11 chr10 32811106 32811526 -112777762 + AluSx SINE Alu 5 449 0 1691 201 0 3 chr10 32812066 32812364 -112776924 - AluJb SINE Alu -15 297 1 834 219 51 20 chr10 32812425 32812621 -112776667 - MER58A DNA MER1_type 0 224 23 2463 58 0 3 chr10 32813304 32813597 -112775691 - AluY SINE Alu -19 292 1 2267 101 10 125 chr10 32813680 32814175 -112775113 - Tigger2 DNA MER2_type 0 2718 3 1020 154 63 91 chr10 32815766 32816019 -112773269 - AluJo SINE Alu -6 306 61 615 226 8 0 chr10 32816038 32816171 -112773117 + MLT1E2 LTR MaLR 65 198 -428 1525 243 78 23 chr10 32816213 32816646 -112772642 - MLT1E2 LTR MaLR -3 623 167 374 189 83 136 chr10 32816681 32816813 -112772475 + AluJb SINE Alu 49 173 -129 697 354 32 17 chr10 32817004 32817349 -112771939 - LTR33 LTR ERVL -171 350 1 601 272 19 0 chr10 32817350 32817512 -112771776 + HAL1 LINE L1 1669 1833 -674 * 1190 259 51 38 chr10 32817507 32817569 -112771719 - L1MEc LINE L1 -3309 2906 2846 3384 134 35 2 chr10 32817569 32818077 -112771211 - MER1A DNA MER1_type 0 527 3 1190 259 51 38 chr10 32818077 32818643 -112770645 - L1MEc LINE L1 -3369 2846 2230 1005 194 22 0 chr10 32818649 32818829 -112770459 - MER58A DNA MER1_type -4 220 37 2704 235 92 59 chr10 32818846 32818895 -112770393 - L1MEc LINE L1 -4123 2273 2227 2223 118 0 10 chr10 32818895 32819209 -112770079 - AluY SINE Alu 0 311 1 2704 235 92 59 chr10 32819209 32819881 -112769407 - L1MEc LINE L1 -4169 2227 1579 1629 146 30 61 chr10 32819881 32820176 -112769112 - AluJo SINE Alu -26 286 1 2704 235 92 59 chr10 32820176 32820880 -112768408 - L1MEc LINE L1 -4817 1579 800 2608 130 5 5 chr10 32820894 32821294 -112767994 - LTR43 LTR ERV1 0 602 203 327 167 197 0 chr10 32821300 32821366 -112767922 - MER58A DNA MER1_type -28 79 1 493 259 80 42 chr10 32821368 32821636 -112767652 + MER69 DNA AcHobo 2168 2449 -77 11514 33 0 0 chr10 32821636 32823743 -112765545 - L1PA4 LINE L1 -3 6152 4046 493 259 80 42 chr10 32823743 32823763 -112765525 + MER69 DNA AcHobo 2449 2467 -59 2484 90 3 0 chr10 32823770 32824081 -112765207 - AluSx SINE Alu 0 312 1 241 217 78 52 chr10 32824720 32824835 -112764453 + MIR SINE MIR 140 257 -5 685 89 105 16 chr10 32824911 32825035 -112764253 - AluYa5 SINE Alu -176 135 1 710 247 19 0 chr10 32825557 32825719 -112763569 + MER3 DNA MER1_type 1 165 -44 2539 173 61 19 chr10 32825726 32825889 -112763399 - L1MA9 LINE L1 0 6312 6157 219 36 0 0 chr10 32825889 32825917 -112763371 + (GA)n Simple_repeat Simple_repeat 1 28 0 2539 173 61 19 chr10 32825917 32826291 -112762997 - L1MA9 LINE L1 -155 6157 5752 242 191 0 0 chr10 32826297 32826344 -112762944 + MER3 DNA MER1_type 154 200 -9 1017 289 35 8 chr10 32826389 32826763 -112762525 - L1ME4a LINE L1 -244 5877 5494 369 316 132 20 chr10 32826862 32827264 -112762024 + LTR16A LTR ERVL 1 447 -3 1751 174 30 10 chr10 32827429 32827728 -112761560 + AluJo SINE Alu 1 305 -7 1776 185 7 3 chr10 32827925 32828223 -112761065 - AluJo SINE Alu -13 299 1 493 84 0 56 chr10 32829665 32829772 -112759516 + (TTTC)n Simple_repeat Simple_repeat 4 104 0 222 271 17 0 chr10 32829779 32829838 -112759450 + C-rich Low_complexity Low_complexity 1 60 0 2181 188 161 128 chr10 32830031 32830146 -112759142 + L1MC3 LINE L1 6672 6782 -1003 2234 101 0 7 chr10 32830146 32830442 -112758846 + AluSc SINE Alu 1 294 -15 2181 188 161 128 chr10 32830442 32830764 -112758524 + L1MC3 LINE L1 6782 7092 -693 457 262 19 0 chr10 32830764 32830867 -112758421 + MLT1F1 LTR MaLR 45 149 -418 2181 188 161 128 chr10 32830867 32831330 -112757958 + L1MC3 LINE L1 7092 7709 -76 2050 160 0 0 chr10 32831778 32832090 -112757198 - AluJo SINE Alu 0 312 1 649 255 112 61 chr10 32833013 32833523 -112755765 - Charlie7 DNA MER1_type 0 2612 2077 925 283 145 2 chr10 32833531 32833930 -112755358 - L1MC/D LINE L1 -2002 5806 5351 617 200 0 31 chr10 32834069 32834199 -112755089 + AluJb SINE Alu 153 278 -34 21 0 0 0 chr10 32834200 32834221 -112755067 + AT_rich Low_complexity Low_complexity 1 21 0 2162 111 4 0 chr10 32834221 32834527 -112754761 + AluSg SINE Alu 1 307 0 408 398 0 0 chr10 32834691 32834862 -112754426 + MIR SINE MIR 67 237 -25 2345 101 3 0 chr10 32834909 32835216 -112754072 - AluSp SINE Alu -4 309 2 269 167 4 40 chr10 32835380 32835455 -112753833 + L1P1 LINE L1 5704 5776 -379 2222 85 0 7 chr10 32835950 32836273 -112753015 + AluSc SINE Alu 1 321 0 781 158 0 15 chr10 32836472 32836605 -112752683 + FLAM_C SINE Alu 3 133 0 1794 141 0 4 chr10 32837072 32837342 -112751946 + AluSx SINE Alu 42 310 -2 1686 160 38 21 chr10 32837364 32837652 -112751636 + AluJo SINE Alu 1 293 -19 247 235 0 44 chr10 32837743 32837811 -112751477 + MIR SINE MIR 83 147 -61 515 145 0 24 chr10 32838578 32838661 -112750627 + AluJ/FLAM SINE Alu 2 82 -230 834 109 9 0 chr10 32838764 32838874 -112750414 - FLAM_C SINE Alu -32 111 1 1913 86 35 0 chr10 32839134 32839390 -112749898 + AluY SINE Alu 46 310 -1 27 0 0 0 chr10 32839433 32839460 -112749828 + AT_rich Low_complexity Low_complexity 1 27 0 1011 158 54 49 chr10 32839626 32839806 -112749482 + AluJo SINE Alu 101 279 -33 180 0 0 0 chr10 32839806 32839826 -112749462 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 611 217 31 0 chr10 32839828 32839957 -112749331 + FLAM_C SINE Alu 1 133 0 1011 158 54 49 chr10 32839957 32839976 -112749312 + AluJo SINE Alu 279 304 -8 1267 71 0 11 chr10 32839980 32840162 -112749126 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 468 163 10 10 chr10 32840190 32840288 -112749000 + GA-rich Low_complexity Low_complexity 4 101 0 3573 220 27 23 chr10 32841897 32843545 -112745743 - L1MD3 LINE L1 -743 5403 4282 1379 160 0 5 chr10 32843690 32843903 -112745385 + AluSx SINE Alu 1 212 -100 284 245 0 4 chr10 32845110 32845351 -112743937 + (CA)n Simple_repeat Simple_repeat 1 239 0 661 316 103 43 chr10 32846013 32846939 -112742349 - L2 LINE L2 0 3313 2289 983 162 29 0 chr10 32847180 32847353 -112741935 + MER2 DNA MER2_type 2 179 -166 801 217 0 0 chr10 32847453 32847610 -112741678 - AluJb SINE Alu -142 170 14 1138 122 0 12 chr10 32847829 32848001 -112741287 + AluSg/x SINE Alu 122 291 -18 2189 82 4 0 chr10 32848004 32848353 -112740935 + AluY SINE Alu 1 350 0 314 287 20 0 chr10 32848949 32849050 -112740238 + L1M4 LINE L1 3081 3183 -2963 1585 181 7 10 chr10 32849196 32849495 -112739793 - AluJo SINE Alu -14 298 1 2173 94 0 3 chr10 32851986 32852284 -112737004 + AluSq SINE Alu 1 297 -16 1722 163 3 3 chr10 32852294 32852588 -112736700 + AluJb SINE Alu 1 294 -18 792 139 134 70 chr10 32852920 32853092 -112736196 + AluJo SINE Alu 15 197 -115 597 248 8 0 chr10 32853092 32853217 -112736071 + MER21B LTR ERV1 133 258 -605 1989 115 0 16 chr10 32853223 32853527 -112735761 + AluSc SINE Alu 2 300 -9 661 165 0 0 chr10 32853528 32853631 -112735657 + AluJo/FRAM SINE Alu 136 238 -74 2189 100 3 3 chr10 32854081 32854391 -112734897 - AluSq SINE Alu -3 310 1 22 0 0 0 chr10 32855959 32855981 -112733307 + AT_rich Low_complexity Low_complexity 1 22 0 1677 211 34 50 chr10 32855987 32856423 -112732865 + L1MB7 LINE L1 5668 6096 -88 1664 155 10 17 chr10 32856437 32856727 -112732561 + AluJo SINE Alu 2 289 -23 759 83 0 0 chr10 32856827 32856935 -112732353 + (GGAA)n Simple_repeat Simple_repeat 4 111 0 967 134 27 0 chr10 32856935 32857084 -112732204 + FRAM SINE Alu 1 150 -26 35 24 0 0 chr10 32857085 32857127 -112732161 + AT_rich Low_complexity Low_complexity 1 42 0 1811 54 0 0 chr10 32857261 32857483 -112731805 + L1PA5 LINE L1 5931 6152 -2 27 0 0 0 chr10 32857483 32857510 -112731778 + AT_rich Low_complexity Low_complexity 1 27 0 186 291 58 68 chr10 32859348 32859451 -112729837 - MIR SINE MIR -42 220 119 1689 167 0 25 chr10 32860165 32860483 -112728805 - AluJo SINE Alu -2 310 1 1288 179 21 0 chr10 32861958 32862192 -112727096 - L1MA6 LINE L1 -75 6225 5987 231 36 0 0 chr10 32862289 32862317 -112726971 + (CA)n Simple_repeat Simple_repeat 2 29 0 289 318 33 40 chr10 32864080 32864231 -112725057 - MIR SINE MIR -104 158 9 271 109 0 36 chr10 32864499 32864554 -112724734 + (TTCCC)n Simple_repeat Simple_repeat 2 54 0 338 192 0 13 chr10 32864584 32864662 -112724626 + CT-rich Low_complexity Low_complexity 1 77 0 2011 122 35 0 chr10 32864891 32865179 -112724109 - AluSx SINE Alu -14 298 1 456 271 131 37 chr10 32865802 32866016 -112723272 + MIR SINE MIR 20 253 -9 1546 153 0 77 chr10 32866395 32866531 -112722757 + AluJb SINE Alu 1 146 -166 2095 89 4 0 chr10 32866531 32866811 -112722477 + AluSp SINE Alu 1 281 -32 699 47 47 0 chr10 32866811 32866917 -112722371 + (GAAA)n Simple_repeat Simple_repeat 2 112 0 1546 153 0 77 chr10 32866917 32867092 -112722196 + AluJb SINE Alu 144 289 -23 1379 234 50 34 chr10 32867096 32867348 -112721940 + MER21B LTR ERV1 14 260 -603 2298 85 3 0 chr10 32867348 32867643 -112721645 + AluSc SINE Alu 1 296 -13 1379 234 50 34 chr10 32867643 32867981 -112721307 + MER21B LTR ERV1 260 718 -145 2034 100 4 0 chr10 32867990 32868269 -112721019 - L1PA12 LINE L1 -15 6153 5874 846 58 0 0 chr10 32868269 32868373 -112720915 + L1P4 LINE L1 5684 5787 -381 794 221 74 22 chr10 32868473 32868704 -112720584 + L1MD3 LINE L1 7737 7979 -16 745 266 70 4 chr10 32868705 32868961 -112720327 - Charlie7 DNA MER1_type -898 1714 1442 1092 189 37 37 chr10 32869331 32869601 -112719687 - L1MB5 LINE L1 -1 6173 5904 586 259 38 49 chr10 32869607 32869792 -112719496 + MER5A DNA MER1_type 1 183 -6 779 219 102 20 chr10 32870452 32870648 -112718640 - AluJb SINE Alu -100 212 1 296 272 62 0 chr10 32870779 32870860 -112718428 + L2 LINE L2 2230 2315 -999 656 173 0 0 chr10 32871890 32872037 -112717251 - FLAM_A SINE Alu 0 164 18 1978 129 26 3 chr10 32872453 32872756 -112716532 + AluSg SINE Alu 1 310 0 463 213 128 35 chr10 32872784 32872925 -112716363 + L2 LINE L2 3160 3313 0 3040 99 25 2 chr10 32873001 32873435 -112715853 + L1PB1 LINE L1 5708 6151 0 214 280 38 61 chr10 32874588 32874720 -112714568 + MIR SINE MIR 65 193 -69 361 313 123 5 chr10 32874828 32875023 -112714265 - MARNA DNA Mariner -135 451 234 231 291 78 29 chr10 32875054 32875157 -112714131 + MARNA DNA Mariner 448 555 -31 263 243 215 0 chr10 32875816 32875923 -112713365 - MIR3 SINE MIR -26 182 53 1649 180 0 26 chr10 32875952 32876263 -112713025 + AluJo SINE Alu 3 305 -7 335 203 0 14 chr10 32879754 32879828 -112709460 - Charlie5 DNA MER1_type -27 2585 2513 1215 119 0 10 chr10 32879929 32880130 -112709158 - AluSc SINE Alu 0 309 111 1269 171 13 0 chr10 32880230 32880464 -112708824 - L1MC1 LINE L1 -247 6086 5850 2116 103 10 0 chr10 32880465 32880885 -112708403 + AluSg SINE Alu 1 423 0 3484 192 20 18 chr10 32880885 32882250 -112707038 - L1MC1 LINE L1 -474 5859 4491 243 146 0 0 chr10 32883255 32883296 -112705992 + (CA)n Simple_repeat Simple_repeat 2 42 0 224 284 34 11 chr10 32884458 32884546 -112704742 + CT-rich Low_complexity Low_complexity 1 90 0 897 263 46 4 chr10 32884547 32884806 -112704482 - L1MC4 LINE L1 -152 7890 7621 841 188 26 86 chr10 32888857 32888907 -112700381 + MER58A DNA MER1_type 4 55 -2365 1679 169 0 25 chr10 32888907 32889221 -112700067 - AluJo SINE Alu -6 306 1 841 188 26 86 chr10 32889221 32889404 -112699884 + MER58A DNA MER1_type 55 223 -1 702 274 153 17 chr10 32890682 32891029 -112698259 - MLT1K LTR MaLR -174 414 21 229 335 147 13 chr10 32891646 32891870 -112697418 + L3 LINE CR1 1199 1452 -125 1121 74 0 14 chr10 32892098 32892246 -112697042 + LOR1b LTR ERV1 13 158 -303 1334 170 98 0 chr10 32892284 32892549 -112696739 + AluJb SINE Alu 21 311 -1 1028 129 6 0 chr10 32892565 32892728 -112696560 + LOR1a LTR ERV1 204 367 -130 27 29 0 0 chr10 32894256 32894290 -112694998 + AT_rich Low_complexity Low_complexity 1 34 0 1652 158 18 7 chr10 32895341 32895620 -112693668 + AluJo SINE Alu 1 282 -30 212 57 0 29 chr10 32895623 32895658 -112693630 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 197 224 75 30 chr10 32896096 32896163 -112693125 + MIR3 SINE MIR 5 74 -134 654 181 25 125 chr10 32896239 32896481 -112692807 + MLT1J LTR MaLR 110 409 -206 2193 76 4 0 chr10 32897059 32897335 -112691953 + AluSg SINE Alu 1 277 -33 312 70 0 0 chr10 32897339 32897382 -112691906 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 1775 164 26 0 chr10 32898150 32898454 -112690834 - AluJo SINE Alu 0 312 1 2144 114 0 0 chr10 32898885 32899175 -112690113 + AluSq SINE Alu 1 290 -23 25 0 0 0 chr10 32899179 32899204 -112690084 + AT_rich Low_complexity Low_complexity 1 25 0 347 228 76 58 chr10 32899848 32900019 -112689269 + MER5B DNA MER1_type 5 178 0 21 0 0 0 chr10 32902143 32902164 -112687124 + AT_rich Low_complexity Low_complexity 1 21 0 2189 119 0 0 chr10 32902421 32902724 -112686564 + AluSc SINE Alu 1 303 -6 200 349 75 9 chr10 32903477 32903583 -112685705 - MER5B DNA MER1_type 0 178 66 317 261 33 11 chr10 32905011 32905103 -112684185 + MIR SINE MIR 19 112 -150 850 161 40 7 chr10 32906260 32906409 -112682879 - AluJb SINE Alu -22 290 137 1972 133 3 0 chr10 32907049 32907351 -112681937 + AluSx SINE Alu 1 303 -9 454 200 24 0 chr10 32907472 32907557 -112681731 - MER4C LTR ERV1 0 465 379 947 158 58 12 chr10 32907559 32907730 -112681558 - THE1C LTR MaLR -196 179 1 276 288 0 0 chr10 32907733 32907799 -112681489 - LTR59 LTR ERV1 -177 420 355 * 718 210 160 13 chr10 32907771 32908009 -112681279 - MER4C LTR ERV1 -192 273 1 2135 82 17 0 chr10 32908045 32908336 -112680952 - AluSx SINE Alu -16 296 1 2622 51 57 3 chr10 32909895 32910245 -112679043 - L1PA13 LINE L1 -1 6162 5794 406 120 53 0 chr10 32910565 32910640 -112678648 + L1MA5A LINE L1 6214 6292 -5 345 47 0 0 chr10 32911263 32911306 -112677982 + (TG)n Simple_repeat Simple_repeat 2 44 0 1478 163 16 0 chr10 32911459 32911710 -112677578 + AluJb SINE Alu 1 255 -57 913 178 0 6 chr10 32911723 32911886 -112677402 + AluJo SINE Alu 120 281 -31 2377 163 20 26 chr10 32912096 32912556 -112676732 - LTR32 LTR ERVL 0 471 15 2031 151 0 0 chr10 32913211 32913523 -112675765 + AluJb SINE Alu 1 312 0 1688 174 0 4 chr10 32914043 32914369 -112674919 - AluJo SINE Alu 0 327 3 2164 151 20 13 chr10 32914585 32914975 -112674313 - L1MB3 LINE L1 -8 6175 5783 734 168 0 0 chr10 32915878 32915991 -112673297 + FLAM_C SINE Alu 1 113 -30 195 125 0 0 chr10 32915996 32916036 -112673252 + (T)n Simple_repeat Simple_repeat 1 40 0 680 213 0 0 chr10 32916143 32916301 -112672987 + AluJb SINE Alu 161 318 0 21 0 0 0 chr10 32916530 32916551 -112672737 + AT_rich Low_complexity Low_complexity 1 21 0 195 318 0 16 chr10 32917382 32917445 -112671843 + MIR SINE MIR 36 97 -165 23 33 0 0 chr10 32918204 32918234 -112671054 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr10 32918523 32918544 -112670744 + AT_rich Low_complexity Low_complexity 1 21 0 940 176 6 6 chr10 32918544 32918714 -112670574 + L1PA16 LINE L1 5997 6166 0 285 75 0 0 chr10 32918959 32918999 -112670289 + (TC)n Simple_repeat Simple_repeat 1 40 0 1935 133 3 0 chr10 32918999 32919292 -112669996 - AluJb SINE Alu -16 296 3 317 222 111 33 chr10 32919754 32919844 -112669444 - L2 LINE L2 -6 3266 3170 2244 87 0 7 chr10 32920167 32920467 -112668821 + AluSq SINE Alu 1 298 -15 270 176 0 0 chr10 32923141 32923192 -112666096 + CT-rich Low_complexity Low_complexity 4 54 0 624 62 0 0 chr10 32923195 32923276 -112666012 + (TCCA)n Simple_repeat Simple_repeat 4 84 0 2323 75 3 0 chr10 32924526 32924818 -112664470 - AluSc SINE Alu -16 293 1 21 0 0 0 chr10 32925456 32925477 -112663811 + AT_rich Low_complexity Low_complexity 1 21 0 2021 116 7 23 chr10 32925493 32925803 -112663485 + AluSc SINE Alu 1 305 -4 220 167 0 33 chr10 32926160 32926220 -112663068 + GA-rich Low_complexity Low_complexity 2 59 0 40 21 0 0 chr10 32926380 32926427 -112662861 + AT_rich Low_complexity Low_complexity 1 47 0 1416 162 0 78 chr10 32926427 32926723 -112662565 - AluJo SINE Alu -22 290 18 289 307 137 1 chr10 32928014 32928124 -112661164 + MIR SINE MIR 36 159 -50 361 207 81 45 chr10 32928148 32928259 -112661029 - MER63 DNA MER1_type -273 789 675 205 330 30 0 chr10 32928549 32928659 -112660629 - MIR SINE MIR -17 191 78 514 314 66 19 chr10 32929891 32930162 -112659126 + L3 LINE CR1 1095 1378 -199 2362 67 7 0 chr10 32930167 32930466 -112658822 + AluY SINE Alu 1 301 -10 2045 119 0 31 chr10 32930469 32930788 -112658500 + AluSg1 SINE Alu 1 309 0 2132 117 3 0 chr10 32931064 32931373 -112657915 - AluSx SINE Alu -2 310 1 588 275 38 33 chr10 32931914 32932125 -112657163 - L1ME LINE L1 -380 5741 5530 827 165 104 12 chr10 32932157 32932321 -112656967 + FRAM SINE Alu 1 173 -3 265 283 61 0 chr10 32932373 32932472 -112656816 + L1ME4a LINE L1 5804 5908 -213 181 274 78 0 chr10 32932648 32932699 -112656589 - MIR SINE MIR -2 260 206 261 280 160 76 chr10 32933532 32933748 -112655540 + L2 LINE L2 2463 2660 -654 408 290 15 0 chr10 32933748 32933879 -112655409 + MER94 DNA DNA 2 134 0 261 280 160 76 chr10 32933879 32934094 -112655194 + L2 LINE L2 2660 2930 -384 4349 219 33 29 chr10 32934248 32935752 -112653536 + L1MCb LINE L1 3 1517 -4851 206 369 54 13 chr10 32935780 32935929 -112653359 + L2 LINE L2 2640 2794 -520 1545 157 30 50 chr10 32936077 32936211 -112653077 + AluJo SINE Alu 6 141 -171 1360 166 17 83 chr10 32936211 32936549 -112652739 + AluJb SINE Alu 1 318 0 1545 157 30 50 chr10 32936549 32936713 -112652575 + AluJo SINE Alu 141 299 -13 468 246 105 12 chr10 32936842 32937013 -112652275 + LTR37B LTR ERV1 12 198 -270 393 239 18 9 chr10 32937058 32937171 -112652117 + LTR37B LTR ERV1 197 310 -158 245 288 132 47 chr10 32937353 32937418 -112651870 + LTR16B LTR ERVL 34 92 -372 2085 141 15 24 chr10 32937418 32937758 -112651530 + MER1B DNA MER1_type 1 337 0 245 288 132 47 chr10 32937758 32937949 -112651339 + LTR16B LTR ERVL 92 312 -152 24 0 0 0 chr10 32938380 32938404 -112650884 + AT_rich Low_complexity Low_complexity 1 24 0 184 217 29 43 chr10 32940102 32940171 -112649117 + L2 LINE L2 2992 3059 -213 2038 131 45 25 chr10 32940212 32940571 -112648717 - MLT1B LTR MaLR -3 387 22 1748 157 7 3 chr10 32940643 32940930 -112648358 - AluJo SINE Alu -24 288 1 1975 149 0 0 chr10 32941579 32941887 -112647401 - AluJo SINE Alu -4 308 1 1702 159 3 10 chr10 32942677 32942966 -112646322 - AluJb SINE Alu -23 289 3 3362 152 0 36 chr10 32943209 32943757 -112645531 + MER1A DNA MER1_type 1 528 -1 1975 115 0 10 chr10 32943893 32944217 -112645071 - AluY SINE Alu 0 311 1 948 168 0 12 chr10 32944221 32944394 -112644894 - AluJo SINE Alu -18 294 124 823 226 0 0 chr10 32944613 32944768 -112644520 + AluJb SINE Alu 14 168 -144 1782 137 21 3 chr10 32944868 32944981 -112644307 + AluJb SINE Alu 15 125 -187 183 42 0 0 chr10 32944981 32945005 -112644283 + (CA)n Simple_repeat Simple_repeat 2 25 0 1782 137 21 3 chr10 32945005 32945176 -112644112 + AluJb SINE Alu 125 304 -8 1595 172 11 4 chr10 32946715 32946994 -112642294 - AluJo SINE Alu -31 281 1 806 211 92 11 chr10 32947562 32947747 -112641541 - MER20 DNA MER1_type -19 200 1 1546 182 3 26 chr10 32953747 32954054 -112635234 - AluJb SINE Alu -1 311 12 292 127 91 18 chr10 32954054 32954495 -112634793 + MIR3 SINE MIR 121 179 -29 185 222 0 185 chr10 32954064 32954104 -112635184 + L3b LINE CR1 1515 1534 -49 * 2249 119 21 52 chr10 32954104 32954491 -112634797 - THE1C LTR MaLR 0 375 1 185 222 0 185 chr10 32954491 32954531 -112634757 + L3b LINE CR1 1534 1580 -3 1886 144 37 0 chr10 32955187 32955485 -112633803 + AluSx SINE Alu 2 310 -2 1979 146 0 16 chr10 32955508 32955823 -112633465 + AluSx SINE Alu 1 310 -2 405 328 15 30 chr10 32955935 32956069 -112633219 - L2 LINE L2 -2 3311 3180 1819 116 0 57 chr10 32956409 32956710 -112632578 - AluSq SINE Alu -29 284 1 337 314 14 7 chr10 32956918 32957058 -112632230 + LTR67 LTR ERVL 417 557 0 2004 143 3 3 chr10 32957396 32957703 -112631585 - Tigger1 DNA MER2_type -194 2224 1918 475 144 11 0 chr10 32957715 32957805 -112631483 - L1PB2 LINE L1 -3 6148 6058 1947 135 0 19 chr10 32957810 32958128 -112631160 - AluSx SINE Alu 0 312 1 632 203 57 0 chr10 32958435 32958558 -112630730 + MLT1A1 LTR MaLR 3 132 -233 2090 171 79 3 chr10 32958577 32958622 -112630666 - MSTB LTR MaLR -16 410 370 1718 114 0 0 chr10 32958622 32958867 -112630421 + AluSx SINE Alu 55 299 -13 2090 171 79 3 chr10 32958867 32959202 -112630086 - MSTB LTR MaLR -56 370 1 930 214 64 56 chr10 32959202 32959364 -112629924 + MLT1A1 LTR MaLR 134 293 -72 297 0 0 0 chr10 32959364 32959397 -112629891 + (TG)n Simple_repeat Simple_repeat 2 34 0 1826 155 0 3 chr10 32959397 32959688 -112629600 - AluSx SINE Alu -16 296 7 930 214 64 56 chr10 32959688 32959754 -112629534 + MLT1A1 LTR MaLR 292 365 0 1757 168 0 13 chr10 32960402 32960717 -112628571 - AluJb SINE Alu -1 311 1 2068 123 3 0 chr10 32960725 32961026 -112628262 - AluSx SINE Alu -10 302 1 189 107 0 0 chr10 32962100 32962128 -112627160 + (TG)n Simple_repeat Simple_repeat 2 29 0 21 0 0 0 chr10 32962216 32962237 -112627051 + AT_rich Low_complexity Low_complexity 1 21 0 1602 143 10 43 chr10 32964954 32965255 -112624033 + AluJo SINE Alu 1 291 -21 5486 139 103 131 chr10 32965900 32967509 -112621779 - pTR5 LTR ERV1 0 2438 743 801 269 75 5 chr10 32968170 32968382 -112620906 - MLT1H1 LTR MaLR -328 227 1 437 221 28 56 chr10 32968388 32968496 -112620792 + MLT1J LTR MaLR 228 418 -197 275 261 75 30 chr10 32969010 32969144 -112620144 - MLT1A1-int LTR MaLR -833 538 399 1740 158 0 29 chr10 32969268 32969578 -112619710 + AluSx SINE Alu 1 301 -11 271 284 14 0 chr10 32969598 32969672 -112619616 - MLT1A1-int LTR MaLR -1283 88 14 1515 155 12 16 chr10 32970838 32971096 -112618192 - AluSq SINE Alu -56 257 1 1469 189 3 34 chr10 32971854 32972176 -112617112 + AluJo SINE Alu 1 312 0 286 278 35 70 chr10 32972454 32972532 -112616756 - MIR SINE MIR -58 150 76 2029 191 6 3 chr10 32972532 32972893 -112616395 - MLT1A1 LTR MaLR 0 365 4 286 278 35 70 chr10 32972893 32972929 -112616359 - MIR SINE MIR -132 76 40 1721 161 140 42 chr10 32973111 32973497 -112615791 + MSTC LTR MaLR 1 424 -4 463 215 0 21 chr10 32973819 32973963 -112615325 + GA-rich Low_complexity Low_complexity 2 142 0 1289 138 67 4 chr10 32974177 32974445 -112614843 + AluSq SINE Alu 10 294 -19 24 0 0 0 chr10 32974654 32974678 -112614610 + AT_rich Low_complexity Low_complexity 1 24 0 4142 197 103 71 chr10 32974911 32975652 -112613636 - Charlie1a DNA MER1_type -1306 1455 739 2416 69 0 0 chr10 32975652 32975958 -112613330 - AluY SINE Alu -5 306 1 4142 197 103 71 chr10 32975958 32976625 -112612663 - Charlie1a DNA MER1_type -2022 739 2 240 253 13 76 chr10 32976626 32976705 -112612583 - MIR3 SINE MIR -48 160 87 24 0 0 0 chr10 32977013 32977037 -112612251 + AT_rich Low_complexity Low_complexity 1 24 0 185 326 0 0 chr10 32977379 32977425 -112611863 - L2 LINE L2 -105 3167 3122 229 239 184 16 chr10 32977451 32977581 -112611707 + MIR SINE MIR 5 154 -89 454 297 153 36 chr10 32977874 32978123 -112611165 - L2 LINE L2 -1 3312 3035 1667 183 3 13 chr10 32979906 32980218 -112609070 + AluJo SINE Alu 1 309 -3 1691 181 35 44 chr10 32981099 32981437 -112607851 - MER2 DNA MER2_type -10 335 1 3166 146 99 15 chr10 32981988 32982584 -112606704 - MER39B LTR ERV1 -2 651 6 522 278 106 24 chr10 32982759 32982990 -112606298 - MIR SINE MIR -6 256 16 188 309 49 37 chr10 32983028 32983109 -112606179 + MIR SINE MIR 1 82 -180 1671 156 14 3 chr10 32983133 32983421 -112605867 + AluJb SINE Alu 1 291 -21 242 301 48 0 chr10 32983426 32983509 -112605779 + MIR SINE MIR 146 232 -30 218 300 0 0 chr10 32983939 32983999 -112605289 + L2 LINE L2 3244 3303 -10 2145 113 7 0 chr10 32984956 32985256 -112604032 + AluSx SINE Alu 1 302 -10 21 36 0 0 chr10 32985285 32985313 -112603975 + AT_rich Low_complexity Low_complexity 1 28 0 332 318 119 13 chr10 32985428 32985579 -112603709 + MIR SINE MIR 80 246 -16 302 194 15 15 chr10 32986499 32986566 -112602722 - L2 LINE L2 -1 3271 3205 271 267 107 23 chr10 32986747 32986878 -112602410 - L1MC/D LINE L1 -1945 5863 5722 714 281 102 57 chr10 32988054 32988182 -112601106 - L2 LINE L2 -8 3305 3184 2206 62 21 3 chr10 32988182 32988470 -112600818 - AluY SINE Alu -18 293 1 714 281 102 57 chr10 32988470 32988482 -112600806 - L2 LINE L2 -129 3184 3174 195 100 0 0 chr10 32988482 32988512 -112600776 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 1970 125 7 0 chr10 32988513 32988793 -112600495 - AluSx SINE Alu -30 282 1 714 281 102 57 chr10 32988793 32989209 -112600079 - L2 LINE L2 -138 3175 2714 2125 82 33 23 chr10 32990000 32990304 -112598984 + AluSp SINE Alu 1 307 -6 1611 145 7 25 chr10 32990438 32990720 -112598568 - AluSq SINE Alu -36 277 1 1113 247 57 13 chr10 32990793 32991109 -112598179 + MER46C DNA MER2_type 9 338 0 199 318 36 82 chr10 32991733 32991843 -112597445 - L2 LINE L2 -65 3207 3103 1361 211 7 10 chr10 32992588 32992896 -112596392 + AluY SINE Alu 5 311 0 257 310 190 43 chr10 32993669 32994063 -112595225 + L2 LINE L2 2819 3270 -2 758 220 183 53 chr10 32994598 32994818 -112594470 - L2 LINE L2 -2 3311 3121 2510 58 0 3 chr10 32994818 32995129 -112594159 + AluY SINE Alu 1 310 -1 758 220 183 53 chr10 32995129 32995486 -112593802 - L2 LINE L2 -192 3121 2653 742 321 0 20 chr10 32996318 32996623 -112592665 - AluJo SINE Alu 0 312 14 2243 102 0 3 chr10 32997170 32997475 -112591813 - AluSx SINE Alu -8 304 1 1065 158 0 0 chr10 32997620 32997778 -112591510 + FAM SINE Alu 1 158 -17 37 39 0 0 chr10 32997778 32997829 -112591459 + AT_rich Low_complexity Low_complexity 1 51 0 599 39 0 0 chr10 32997829 32997907 -112591381 - L1HS LINE L1 0 6155 6078 380 235 0 59 chr10 32998050 32998152 -112591136 + L2 LINE L2 3174 3269 -3 22 0 0 0 chr10 32998258 32998280 -112591008 + AT_rich Low_complexity Low_complexity 1 22 0 2634 224 40 16 chr10 32998360 32999265 -112590023 + L1ME1 LINE L1 4691 5617 -549 1252 228 56 44 chr10 32999265 32999322 -112589966 - MLT2D LTR ERVL -5 409 354 2407 50 0 33 chr10 32999322 32999623 -112589665 - AluY SINE Alu -20 291 1 1252 228 56 44 chr10 32999623 32999955 -112589333 - MLT2D LTR ERVL -60 354 15 1813 220 34 62 chr10 32999970 33000534 -112588754 + L1ME1 LINE L1 5611 6158 -8 678 85 57 0 chr10 33000981 33001087 -112588201 + L1 LINE L1 4640 4751 -1395 676 251 55 0 chr10 33001140 33001323 -112587965 + L1M2 LINE L1 3413 3605 -2541 * 2865 151 47 23 chr10 33001302 33002292 -112586996 + L1M2 LINE L1 4731 5754 -546 2532 55 6 10 chr10 33002730 33003042 -112586246 - AluY SINE Alu 0 311 1 1335 278 108 11 chr10 33003225 33003783 -112585505 - MLT1L LTR MaLR 0 615 4 233 338 41 28 chr10 33003901 33004046 -112585242 + L2 LINE L2 1776 1922 -1392 3057 228 83 33 chr10 33004071 33005542 -112583746 - L1MEc LINE L1 -2975 3982 2460 1801 260 27 22 chr10 33005636 33006225 -112583063 - L1MEc LINE L1 -4481 2478 1887 1716 193 0 13 chr10 33006246 33006552 -112582736 - AluJb SINE Alu -10 302 1 1568 185 53 45 chr10 33006603 33006959 -112582329 - MSTC LTR MaLR 0 428 70 6228 240 35 45 chr10 33007059 33008542 -112580746 - MSTC-int LTR MaLR -77 1658 192 2146 124 7 0 chr10 33008542 33008841 -112580447 + AluSx SINE Alu 1 301 -11 6228 240 35 45 chr10 33008841 33009031 -112580257 - MSTC-int LTR MaLR -1543 192 2 469 167 217 8 chr10 33009033 33009153 -112580135 - MSTC LTR MaLR 0 428 284 2348 273 29 65 chr10 33009593 33010360 -112578928 - L1MEc LINE L1 -6110 749 11 644 272 19 14 chr10 33010440 33010653 -112578635 - L1MC5 LINE L1 -453 7508 7295 678 266 0 30 chr10 33010675 33010844 -112578444 - MER5A DNA MER1_type -12 177 14 1090 195 48 78 chr10 33010865 33011260 -112578028 - L1MC5 LINE L1 -722 7239 6857 291 244 0 87 chr10 33011297 33011412 -112577876 - L1MC4a LINE L1 -1145 6663 6559 242 293 104 19 chr10 33011663 33011769 -112577519 - L2 LINE L2 -5 3267 3153 1998 200 49 11 chr10 33011982 33012427 -112576861 - MLT2C2 LTR ERVL -2 462 1 235 35 0 0 chr10 33012743 33012772 -112576516 + MLT2C2 LTR ERVL 434 462 -2 917 197 85 64 chr10 33012934 33013324 -112575964 + MER114 LTR ERV 1 398 -250 1461 156 53 113 chr10 33013347 33013744 -112575544 - MLT1A2 LTR MaLR 0 374 2 914 216 0 0 chr10 33013919 33014081 -112575207 - AluJb SINE Alu -14 298 137 2350 214 76 44 chr10 33014366 33014419 -112574869 - MER82 DNA MER2_type -1 652 602 1071 151 40 104 chr10 33014419 33014670 -112574618 + MER46A DNA MER2_type 1 235 -1 2350 214 76 44 chr10 33014670 33015040 -112574248 - MER82 DNA MER2_type -51 602 200 1721 176 64 9 chr10 33015040 33015369 -112573919 - MER7A DNA MER2_type 0 346 2 2350 214 76 44 chr10 33015369 33015574 -112573714 - MER82 DNA MER2_type -453 200 3 1098 195 30 26 chr10 33017185 33017452 -112571836 + L1MD3 LINE L1 7726 7993 -2 25 0 0 0 chr10 33017514 33017539 -112571749 + AT_rich Low_complexity Low_complexity 1 25 0 2180 142 132 5 chr10 33017640 33018020 -112571268 + MSTA LTR MaLR 1 428 0 2442 87 0 0 chr10 33018922 33019233 -112570055 + AluY SINE Alu 1 311 0 371 187 201 45 chr10 33019406 33019430 -112569858 - MIR SINE MIR 0 262 243 2227 94 3 10 chr10 33019430 33019727 -112569561 - AluSg SINE Alu -15 295 1 371 187 201 45 chr10 33019727 33019836 -112569452 - MIR SINE MIR -19 243 108 1623 285 158 26 chr10 33020507 33021248 -112568040 + L2 LINE L2 2075 2913 -401 290 264 94 19 chr10 33021437 33021543 -112567745 + L3 LINE CR1 1258 1371 -206 959 61 46 0 chr10 33021544 33021675 -112567613 + L1P LINE L1 2496 2632 -3514 2527 106 0 0 chr10 33021680 33022037 -112567251 - L1P LINE L1 -1276 4870 4514 1915 136 20 0 chr10 33022037 33022331 -112566957 - Tigger1 DNA MER2_type -967 1451 1152 1221 104 35 0 chr10 33022345 33022518 -112566770 + Tigger1 DNA MER2_type 975 1153 -1265 1020 221 17 81 chr10 33022519 33022882 -112566406 + L1ME2 LINE L1 5833 6334 0 2139 116 3 0 chr10 33023326 33023620 -112565668 - AluSg SINE Alu -15 295 1 559 294 166 27 chr10 33023630 33023998 -112565290 + MLT1J LTR MaLR 44 462 -49 1497 171 50 34 chr10 33024565 33024863 -112564425 - AluJo SINE Alu -9 303 1 214 268 27 18 chr10 33025156 33025268 -112564020 + T-rich Low_complexity Low_complexity 1 113 0 29 28 0 0 chr10 33025302 33025338 -112563950 + AT_rich Low_complexity Low_complexity 1 36 0 25 0 0 0 chr10 33025466 33025491 -112563797 + AT_rich Low_complexity Low_complexity 1 25 0 21 71 0 0 chr10 33025631 33025673 -112563615 + AT_rich Low_complexity Low_complexity 1 42 0 384 332 98 30 chr10 33026435 33026610 -112562678 + MIR3 SINE MIR 3 196 -12 1585 199 31 0 chr10 33026894 33027180 -112562108 - AluJo SINE Alu -17 295 1 185 200 110 50 chr10 33027859 33027959 -112561329 - L2 LINE L2 -8 3305 3200 220 320 144 16 chr10 33027998 33028123 -112561165 - L2 LINE L2 -5 3308 3168 273 29 0 0 chr10 33028391 33028425 -112560863 + (ATG)n Simple_repeat Simple_repeat 2 35 0 2401 84 0 0 chr10 33029109 33029408 -112559880 + AluY SINE Alu 1 299 -12 21 0 0 0 chr10 33029791 33029812 -112559476 + AT_rich Low_complexity Low_complexity 1 21 0 267 327 40 20 chr10 33030089 33030190 -112559098 - MIR SINE MIR 0 262 160 241 236 231 21 chr10 33030851 33031014 -112558274 + MIR SINE MIR 51 262 0 453 36 0 0 chr10 33031217 33031272 -112558016 + (TG)n Simple_repeat Simple_repeat 2 56 0 2436 78 7 0 chr10 33032636 33032943 -112556345 + AluSp SINE Alu 1 309 -4 216 286 0 0 chr10 33034631 33034680 -112554608 + L2 LINE L2 3193 3241 -31 2317 113 0 0 chr10 33034680 33034989 -112554299 - AluY SINE Alu -2 309 1 1676 158 11 0 chr10 33035032 33035298 -112553990 - AluJo SINE Alu -14 298 30 5584 103 55 0 chr10 33035448 33036546 -112552742 - L1PA16 LINE L1 -9 6157 5018 1939 106 31 31 chr10 33037493 33037786 -112551502 - AluSg SINE Alu -17 293 1 2303 99 16 0 chr10 33037960 33038263 -112551025 - AluSq SINE Alu -5 308 1 23 0 0 0 chr10 33038542 33038565 -112550723 + AT_rich Low_complexity Low_complexity 1 23 0 261 330 137 52 chr10 33038977 33039210 -112550078 + L2 LINE L2 2181 2433 -881 412 263 263 7 chr10 33039254 33039391 -112549897 + MER5A DNA MER1_type 18 189 0 203 333 0 0 chr10 33039776 33039836 -112549452 + L2 LINE L2 2695 2754 -560 270 239 277 8 chr10 33042012 33042142 -112547146 + MER20B DNA MER1_type 25 189 -594 767 276 86 0 chr10 33042584 33042794 -112546494 + L2 LINE L2 2550 2777 -537 524 278 199 50 chr10 33042839 33042994 -112546294 - L2 LINE L2 -905 2409 2278 1113 196 5 14 chr10 33042994 33043214 -112546074 + MER20 DNA MER1_type 2 219 0 524 278 199 50 chr10 33043214 33043461 -112545827 - L2 LINE L2 -1036 2278 1947 232 345 97 0 chr10 33043634 33043779 -112545509 - L2 LINE L2 -2222 1092 934 2968 179 54 82 chr10 33043876 33044709 -112544579 + L1MA9 LINE L1 5465 6274 -38 402 209 23 12 chr10 33044838 33044924 -112544364 + MIR SINE MIR 48 134 -128 1357 196 56 116 chr10 33044935 33045016 -112544272 + MLT1D LTR MaLR 1 85 -420 4018 181 79 11 chr10 33045016 33045823 -112543465 + MER21B LTR ERV1 1 862 -1 1357 196 56 116 chr10 33045823 33046213 -112543075 + MLT1D LTR MaLR 85 439 -66 2360 86 0 13 chr10 33046213 33046527 -112542761 - AluSg SINE Alu 0 310 1 1357 196 56 116 chr10 33046527 33046591 -112542697 + MLT1D LTR MaLR 439 505 0 272 301 24 24 chr10 33046608 33046691 -112542597 + MIR SINE MIR 162 244 -18 481 305 21 14 chr10 33046775 33046916 -112542372 + MIR3 SINE MIR 61 202 -6 4560 154 56 11 chr10 33047224 33048150 -112541138 - L1MB7 LINE L1 -9 6175 5209 2310 98 0 10 chr10 33048787 33049092 -112540196 - AluSg SINE Alu -6 304 3 1194 218 4 30 chr10 33049552 33049814 -112539474 + AluJo SINE Alu 1 255 -57 1002 157 46 30 chr10 33049918 33050115 -112539173 + THE1C LTR MaLR 176 375 0 210 376 92 0 chr10 33050615 33050724 -112538564 - L2 LINE L2 -38 3234 3116 329 206 164 34 chr10 33050736 33050882 -112538406 - MER104 DNA Tc2 -13 167 3 1221 168 78 84 chr10 33051028 33051266 -112538022 - MLT1B LTR MaLR -47 343 106 1283 190 40 90 chr10 33051266 33051645 -112537643 - MLT1A1 LTR MaLR -3 362 3 1221 168 78 84 chr10 33051645 33051751 -112537537 - MLT1B LTR MaLR -284 106 1 375 269 69 28 chr10 33051762 33051907 -112537381 + MIR SINE MIR 111 261 -1 1877 152 35 3 chr10 33052095 33052385 -112536903 - AluJo SINE Alu -13 299 1 1593 189 39 0 chr10 33052772 33053052 -112536236 + AluJo SINE Alu 1 291 -21 194 245 0 41 chr10 33053397 33053446 -112535842 - L2 LINE L2 -95 3218 3172 435 205 83 90 chr10 33053978 33054134 -112535154 + MER112 DNA MER1_type 2 156 -104 365 274 244 0 chr10 33054379 33054580 -112534708 + MIR SINE MIR 12 261 -1 2279 90 3 3 chr10 33056071 33056370 -112532918 + AluSc SINE Alu 1 299 -10 33 66 0 0 chr10 33057179 33057240 -112532048 + GC_rich Low_complexity Low_complexity 1 61 0 236 325 81 16 chr10 33058482 33058605 -112530683 + MIR SINE MIR 17 147 -61 262 298 200 12 chr10 33058742 33058997 -112530291 - L2 LINE L2 -61 3252 2950 658 236 128 0 chr10 33059028 33059223 -112530065 - MIR SINE MIR -21 241 22 603 314 182 13 chr10 33059261 33059784 -112529504 - L2 LINE L2 -388 2926 2316 908 256 0 21 chr10 33059815 33060057 -112529231 - MIR SINE MIR -15 247 11 260 219 55 0 chr10 33060061 33060134 -112529154 - L2 LINE L2 -995 2319 2243 250 337 70 0 chr10 33060285 33060371 -112528917 + L2 LINE L2 3154 3245 -27 30 0 0 0 chr10 33061261 33061291 -112527997 + AT_rich Low_complexity Low_complexity 1 30 0 22 35 0 0 chr10 33061859 33061888 -112527400 + AT_rich Low_complexity Low_complexity 1 29 0 7367 49 0 2 chr10 33061888 33063175 -112526113 - L1PA5 LINE L1 -3 6151 4869 24 0 0 0 chr10 33063285 33063309 -112525979 + AT_rich Low_complexity Low_complexity 1 24 0 893 208 0 42 chr10 33063724 33063916 -112525372 + MER20 DNA MER1_type 36 219 0 244 308 0 0 chr10 33063921 33063986 -112525302 + CT-rich Low_complexity Low_complexity 3 67 0 2415 68 0 7 chr10 33064501 33064797 -112524491 - AluY SINE Alu -17 294 1 316 336 50 0 chr10 33064829 33064948 -112524340 - MIR SINE MIR -64 198 74 8651 99 25 31 chr10 33066086 33066581 -112522707 - HSMAR1 DNA Mariner 0 1287 791 2374 110 3 0 chr10 33066581 33066889 -112522399 + AluSx SINE Alu 1 309 -3 8651 99 25 31 chr10 33066889 33067687 -112521601 - HSMAR1 DNA Mariner -496 791 1 22 0 0 0 chr10 33067810 33067832 -112521456 + AT_rich Low_complexity Low_complexity 1 22 0 607 115 0 0 chr10 33068000 33068087 -112521201 + AluJ/FRAM SINE Alu 216 302 -10 33 43 0 0 chr10 33068324 33068371 -112520917 + AT_rich Low_complexity Low_complexity 1 47 0 1195 195 75 95 chr10 33068482 33068928 -112520360 + LTR56 LTR ERV1 2 436 -1 260 235 61 41 chr10 33069163 33069261 -112520027 - L1MC/D LINE L1 -2329 5479 5380 775 175 34 17 chr10 33069288 33069465 -112519823 + MER53 DNA DNA 7 186 -3 337 317 97 20 chr10 33069477 33069827 -112519461 - L1MC/D LINE L1 -789 5357 4981 738 263 30 0 chr10 33069829 33070027 -112519261 - L2 LINE L2 -455 2859 2656 617 308 43 49 chr10 33070027 33070332 -112518956 + MLT1J LTR MaLR 1 303 -208 235 224 29 80 chr10 33070338 33070512 -112518776 + MLT1J1 LTR MaLR 280 396 -13 731 274 137 4 chr10 33071124 33071379 -112517909 - MLT1I LTR MaLR -49 360 72 717 290 70 48 chr10 33072301 33072723 -112516565 + MLT1J LTR MaLR 72 448 -2 23 0 0 0 chr10 33072947 33072970 -112516318 + AT_rich Low_complexity Low_complexity 1 23 0 1201 223 47 36 chr10 33073087 33073388 -112515900 + MLT1A2 LTR MaLR 3 306 -68 2364 103 0 0 chr10 33073480 33073780 -112515508 - AluSx SINE Alu -12 300 1 188 243 0 14 chr10 33073866 33073936 -112515352 + (TAA)n Simple_repeat Simple_repeat 1 69 0 1385 187 55 52 chr10 33073974 33074263 -112515025 + AluJo SINE Alu 1 290 -22 222 37 0 0 chr10 33074263 33074280 -112515008 + (CA)n Simple_repeat Simple_repeat 1 44 0 222 37 0 0 chr10 33074280 33074307 -112514981 + (CA)n Simple_repeat Simple_repeat 2 28 0 587 278 84 0 chr10 33074328 33074519 -112514769 - MIR SINE MIR 0 262 56 1706 186 30 24 chr10 33074546 33074918 -112514370 + MLT1A2 LTR MaLR 1 374 0 248 303 131 51 chr10 33074991 33075463 -112513825 - L2 LINE L2 -1227 2087 1578 2646 20 0 0 chr10 33075811 33076104 -112513184 - AluYa5 SINE Alu -18 293 1 4162 173 94 18 chr10 33078245 33079756 -112509532 - MER52A LTR ERV1 0 1755 66 23 0 0 0 chr10 33081980 33082003 -112507285 + AT_rich Low_complexity Low_complexity 1 23 0 2140 53 43 66 chr10 33083344 33083648 -112505640 - AluY SINE Alu -14 297 1 303 321 100 0 chr10 33084008 33084148 -112505140 + MIR SINE MIR 64 217 -45 2166 114 0 25 chr10 33084329 33084645 -112504643 - AluSg SINE Alu -2 308 1 21 0 0 0 chr10 33084654 33084675 -112504613 + AT_rich Low_complexity Low_complexity 1 21 0 352 284 52 37 chr10 33084894 33085028 -112504260 + L2 LINE L2 3128 3263 -9 21 71 0 0 chr10 33086212 33086254 -112503034 + AT_rich Low_complexity Low_complexity 1 42 0 920 278 85 20 chr10 33086850 33087250 -112502038 + L1MC4a LINE L1 5567 5992 -1816 2024 112 31 3 chr10 33087464 33087758 -112501530 - AluSx SINE Alu -10 302 1 222 343 10 20 chr10 33087775 33087877 -112501411 + MIR SINE MIR 5 105 -157 5060 89 27 0 chr10 33087879 33089142 -112500146 - L1PA13 LINE L1 -3 6160 4834 307 242 75 68 chr10 33089365 33089526 -112499762 + MER112 DNA MER1_type 66 227 -33 2316 94 0 25 chr10 33089942 33090260 -112499028 - AluSx SINE Alu -2 310 1 277 291 56 11 chr10 33097220 33097343 -112491945 + MIR SINE MIR 33 158 -50 208 337 59 10 chr10 33097456 33097557 -112491731 + L2 LINE L2 3147 3252 -20 1657 156 26 4 chr10 33098611 33098902 -112490386 + AluJo SINE Alu 13 309 0 553 213 12 71 chr10 33098973 33099142 -112490146 - MIR SINE MIR -21 241 83 2279 100 0 0 chr10 33099749 33100039 -112489249 - AluSq SINE Alu -17 296 7 305 335 60 32 chr10 33100825 33101043 -112488245 - MLT1K LTR MaLR -113 475 252 2849 122 16 0 chr10 33101485 33101926 -112487362 + L1PB3 LINE L1 5703 6150 -4 412 268 108 0 chr10 33102031 33102188 -112487100 - MER5B DNA MER1_type -4 174 1 181 281 22 45 chr10 33102382 33102471 -112486817 - L2 LINE L2 -181 3091 3005 747 203 0 13 chr10 33102645 33102859 -112486429 - FRAM SINE Alu 0 176 20 255 147 73 0 chr10 33102866 33102934 -112486354 + T-rich Low_complexity Low_complexity 5 77 0 281 285 138 0 chr10 33103006 33103129 -112486159 - MER5B DNA MER1_type -4 174 35 249 337 0 10 chr10 33104254 33104352 -112484936 + C-rich Low_complexity Low_complexity 2 98 0 242 241 13 25 chr10 33104399 33104478 -112484810 + MIR3 SINE MIR 107 184 -24 1887 175 0 13 chr10 33105075 33105389 -112483899 + AluJo SINE Alu 1 310 -2 195 273 80 0 chr10 33107834 33107922 -112481366 - L2 LINE L2 -1004 2310 2216 2247 112 0 10 chr10 33108658 33108962 -112480326 - AluSg1 SINE Alu -8 301 1 280 0 24 24 chr10 33109039 33109080 -112480208 + (TTTTG)n Simple_repeat Simple_repeat 2 42 0 595 221 198 16 chr10 33109141 33109329 -112479959 + MIR SINE MIR 37 262 0 2073 164 43 33 chr10 33109837 33110143 -112479145 + MSTB LTR MaLR 1 314 -112 1866 136 57 14 chr10 33110143 33110423 -112478865 - AluSx SINE Alu -20 292 1 2073 164 43 33 chr10 33110423 33110538 -112478750 + MSTB LTR MaLR 314 426 0 253 167 0 0 chr10 33111363 33111405 -112477883 + 5S rRNA rRNA 1 42 -79 410 285 83 0 chr10 33111505 33111649 -112477639 - MER103 DNA DNA -10 156 1 234 62 0 0 chr10 33111923 33111955 -112477333 + (GA)n Simple_repeat Simple_repeat 1 32 0 374 239 176 0 chr10 33112340 33112492 -112476796 + MER5A DNA MER1_type 4 186 -3 345 197 0 0 chr10 33112863 33112939 -112476349 + (ATG)n Simple_repeat Simple_repeat 1 76 0 251 172 125 16 chr10 33114976 33115040 -112474248 + MIR SINE MIR 92 162 -100 354 335 43 16 chr10 33115160 33115345 -112473943 - MIR SINE MIR -39 223 34 1674 163 14 24 chr10 33116425 33116719 -112472569 - AluJo SINE Alu -21 291 1 2136 148 0 0 chr10 33116956 33117267 -112472021 + AluSx SINE Alu 1 311 -1 1120 164 23 90 chr10 33118525 33118607 -112470681 + L1MA10 LINE L1 6052 6138 -196 1947 141 17 3 chr10 33118607 33118905 -112470383 + AluSx SINE Alu 1 302 -10 1120 164 23 90 chr10 33118905 33119121 -112470167 + L1MA10 LINE L1 6138 6330 -4 380 282 155 0 chr10 33119121 33119295 -112469993 + MER113 DNA MER1_type? 211 411 -110 1867 163 0 27 chr10 33120603 33120904 -112468384 - AluJo SINE Alu -19 293 1 2289 159 35 46 chr10 33122738 33123198 -112466090 - MLT1C LTR MaLR 0 467 13 2542 61 0 0 chr10 33123339 33123633 -112465655 - AluY SINE Alu -17 294 1 1932 141 3 0 chr10 33124016 33124323 -112464965 + AluJb SINE Alu 1 308 0 370 346 63 0 chr10 33124482 33124687 -112464601 - L1ME LINE L1 -385 5736 5519 315 245 20 59 chr10 33124692 33124794 -112464494 - L1ME LINE L1 -825 5321 5224 723 102 0 17 chr10 33124929 33125047 -112464241 + AluSg/x SINE Alu 176 291 -19 2060 199 19 17 chr10 33125047 33125524 -112463764 - L1MB8 LINE L1 -6 6172 5695 406 95 135 0 chr10 33125952 33126026 -112463262 + L1MA3 LINE L1 6178 6261 -44 2302 119 0 0 chr10 33126028 33126331 -112462957 + AluSx SINE Alu 3 305 -7 244 261 72 63 chr10 33126521 33126632 -112462656 + MIR SINE MIR 2 113 -149 1607 166 0 23 chr10 33127771 33128036 -112461252 + AluJo SINE Alu 1 259 -53 368 343 0 4 chr10 33128972 33129114 -112460174 - MERVL LTR ERVL -2226 3259 3144 769 351 20 46 chr10 33129144 33129534 -112459754 - MERVL LTR ERVL -1973 3023 2644 582 300 115 12 chr10 33129571 33129814 -112459474 - MERVL LTR ERVL -3171 2593 2326 903 315 64 30 chr10 33129866 33130304 -112458984 - MERVL LTR ERVL -3478 2176 1724 2214 114 117 16 chr10 33130498 33130874 -112458414 + MSTA LTR MaLR 1 414 -14 2000 135 11 3 chr10 33130874 33131203 -112458085 + AluSq SINE Alu 1 331 0 365 402 4 4 chr10 33131242 33131476 -112457812 - MERVL LTR ERVL -3707 1289 1056 1700 179 0 42 chr10 33131478 33131604 -112457684 + AluJo SINE Alu 1 131 -181 2044 103 21 28 chr10 33131604 33131895 -112457393 - AluSx SINE Alu -21 291 3 1700 179 0 42 chr10 33131895 33132132 -112457156 + AluJo SINE Alu 131 312 0 353 323 70 7 chr10 33132533 33132764 -112456524 - MERVL LTR ERVL -4379 619 410 1745 168 27 3 chr10 33132790 33133126 -112456162 + MER7A DNA MER2_type 1 345 -1 240 362 31 16 chr10 33133443 33133570 -112455718 - LTR16C LTR ERVL -263 228 100 824 270 138 6 chr10 33133936 33134255 -112455033 - L2 LINE L2 0 3313 2953 192 316 23 30 chr10 33134303 33134436 -112454852 - L2 LINE L2 -457 2857 2726 329 24 0 0 chr10 33134457 33134498 -112454790 - MADE1 DNA Mariner 0 80 40 226 75 25 0 chr10 33134511 33134551 -112454737 + HSMAR1 DNA Mariner 1 41 -1246 348 206 0 0 chr10 33135459 33135527 -112453761 - MSTD LTR MaLR 0 396 329 1832 147 36 19 chr10 33135528 33135835 -112453453 + AluJo SINE Alu 1 312 0 2300 99 0 37 chr10 33135922 33136245 -112453043 + AluSq SINE Alu 3 313 0 317 208 0 123 chr10 33136471 33136577 -112452711 + L2 LINE L2 3183 3275 -38 397 256 227 19 chr10 33136612 33136881 -112452407 + L1ME4a LINE L1 5793 6117 -4 631 345 76 26 chr10 33137615 33137997 -112451291 + L3 LINE CR1 1174 1574 -3 477 277 47 107 chr10 33138173 33138602 -112450686 + LTR67 LTR ERVL 67 469 -88 745 275 201 26 chr10 33138617 33138995 -112450293 + MLT1J2 LTR MaLR 7 450 0 1674 203 3 7 chr10 33139421 33139726 -112449562 + AluJo SINE Alu 1 304 -8 990 158 55 0 chr10 33139726 33139891 -112449397 + AluJo/FRAM SINE Alu 135 308 -4 205 289 58 41 chr10 33140702 33140823 -112448465 - MIR3 SINE MIR -42 166 44 25 65 0 0 chr10 33141167 33141213 -112448075 + GC_rich Low_complexity Low_complexity 1 46 0 195 42 0 0 chr10 33141676 33141700 -112447588 + (A)n Simple_repeat Simple_repeat 1 24 0 287 213 62 0 chr10 33144206 33144286 -112445002 + HERVFH21 LTR ERV1 18 102 -6427 680 214 0 53 chr10 33145710 33145897 -112443391 - AluJo SINE Alu -18 294 118 627 198 0 8 chr10 33146038 33146159 -112443129 - FLAM_A SINE Alu -10 123 4 499 274 76 36 chr10 33146461 33146738 -112442550 + L2 LINE L2 2317 2604 -710 596 310 13 8 chr10 33146815 33147054 -112442234 - LTR16B LTR ERVL -2 462 223 194 322 161 21 chr10 33147356 33147499 -112441789 + L2 LINE L2 2898 3060 -212 1723 139 64 39 chr10 33147673 33147811 -112441477 + MSTA LTR MaLR 60 193 -235 1939 143 3 3 chr10 33147811 33148105 -112441183 + AluY SINE Alu 1 294 -17 1723 139 64 39 chr10 33148105 33148325 -112440963 + MSTA LTR MaLR 193 427 -1 1416 115 67 52 chr10 33148326 33148596 -112440692 - Tigger2a DNA MER2_type -160 274 1 2087 135 0 0 chr10 33148660 33148981 -112440307 - AluSx SINE Alu 0 321 1 1871 148 23 0 chr10 33149301 33149605 -112439683 + AluSq SINE Alu 3 313 0 874 122 8 15 chr10 33149849 33149980 -112439308 + FLAM_C SINE Alu 14 143 0 2781 169 9 18 chr10 33150097 33150775 -112438513 + L1MA4A LINE L1 5570 6302 -1 387 254 64 0 chr10 33150777 33150887 -112438401 + MIR SINE MIR 136 252 -10 1980 112 0 31 chr10 33151477 33151764 -112437524 + AluSq SINE Alu 25 302 -11 2196 120 3 0 chr10 33153473 33153765 -112435523 - AluSp SINE Alu -20 293 1 687 150 0 53 chr10 33153772 33153905 -112435383 - L1PB4 LINE L1 -12 6144 6019 1288 119 9 55 chr10 33155732 33155951 -112433337 - MSTB1 LTR MaLR -1 431 223 1151 53 0 0 chr10 33155952 33156084 -112433204 + AluY SINE Alu 1 132 -179 1725 185 7 3 chr10 33156087 33156384 -112432904 + AluJb SINE Alu 1 298 -14 331 233 10 107 chr10 33156384 33156409 -112432879 - MER7A DNA MER2_type -2946 92 66 2156 122 0 7 chr10 33156409 33156704 -112432584 + AluSq SINE Alu 1 293 -20 331 233 10 107 chr10 33156704 33156781 -112432507 - MER7A DNA MER2_type -2972 66 2 199 306 47 112 chr10 33158371 33158541 -112430747 + L2 LINE L2 2600 2758 -556 1166 182 21 0 chr10 33158567 33158754 -112430534 + MER58A DNA MER1_type 34 224 0 1716 88 13 108 chr10 33158791 33159098 -112430190 - AluSx SINE Alu 0 312 35 189 257 150 62 chr10 33159317 33159430 -112429858 + L2 LINE L2 3177 3299 -14 2062 211 82 19 chr10 33159909 33160557 -112428731 + L1M4 LINE L1 2412 3100 -3046 228 331 48 35 chr10 33160653 33160798 -112428490 - L2 LINE L2 -1392 1922 1776 1461 280 109 12 chr10 33160916 33161474 -112427814 + MLT1L LTR MaLR 4 615 0 2242 99 6 10 chr10 33161657 33161969 -112427319 + AluY SINE Alu 1 311 0 1511 201 0 26 chr10 33162227 33162530 -112426758 + AluJo SINE Alu 1 295 -17 369 316 68 63 chr10 33163485 33163675 -112425613 + L2 LINE L2 2924 3114 -158 2623 45 0 7 chr10 33163987 33164295 -112424993 - AluSp SINE Alu -7 306 1 433 236 136 78 chr10 33164356 33164547 -112424741 - Charlie8 DNA MER1_type -2136 281 80 997 198 6 6 chr10 33164548 33164720 -112424568 - Tigger2 DNA MER2_type -11 2707 2536 1158 113 25 39 chr10 33164721 33164925 -112424363 + MSTA LTR MaLR 1 201 -227 1393 163 12 40 chr10 33165033 33165285 -112424003 - AluJo SINE Alu -57 255 11 1586 166 21 25 chr10 33165806 33166160 -112423128 + AluJo SINE Alu 1 353 0 351 314 0 0 chr10 33166193 33166279 -112423009 - L2 LINE L2 -51 3221 3136 2294 104 0 10 chr10 33166292 33166599 -112422689 + AluSx SINE Alu 1 304 -8 464 277 77 8 chr10 33166607 33166737 -112422551 - MER91C DNA MER1_type 0 140 2 219 349 101 0 chr10 33166810 33166919 -112422369 - L2 LINE L2 -198 3074 2955 182 244 22 0 chr10 33167295 33167340 -112421948 + L2 LINE L2 2703 2748 -566 387 0 0 0 chr10 33167496 33167539 -112421749 + (TGGA)n Simple_repeat Simple_repeat 4 46 0 372 335 12 6 chr10 33167789 33167959 -112421329 + L1ME LINE L1 5647 5817 -304 1474 238 99 16 chr10 33167999 33168024 -112421264 - HsTC2 DNA Tc2 -7 1891 1869 1778 142 42 0 chr10 33168024 33168312 -112420976 - AluSx SINE Alu -10 302 3 1474 238 99 16 chr10 33168312 33168850 -112420438 - HsTC2 DNA Tc2 -29 1869 1281 682 128 30 105 chr10 33169148 33169228 -112420060 + AluJo/FLAM SINE Alu 1 69 -243 2265 98 3 3 chr10 33169228 33169525 -112419763 - AluSx SINE Alu -13 299 3 682 128 30 105 chr10 33169525 33169577 -112419711 + AluJo/FLAM SINE Alu 69 123 -189 279 0 0 0 chr10 33169583 33169614 -112419674 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 334 330 110 47 chr10 33170029 33170274 -112419014 + L2 LINE L2 2995 3264 -49 1295 285 58 25 chr10 33170274 33170723 -112418565 - LTR16B LTR ERVL 0 464 1 334 330 110 47 chr10 33170723 33170777 -112418511 + L2 LINE L2 3264 3313 0 1635 171 10 32 chr10 33171272 33171582 -112417706 - AluJo SINE Alu -9 303 1 229 316 25 0 chr10 33172556 33172635 -112416653 + L2 LINE L2 3192 3272 0 219 338 181 31 chr10 33172654 33172947 -112416341 - L3 LINE CR1 -1171 406 70 27 73 0 0 chr10 33173283 33173338 -112415950 + AT_rich Low_complexity Low_complexity 1 55 0 334 325 61 15 chr10 33173376 33173573 -112415715 - LTR50 LTR ERVL -133 662 457 578 240 151 0 chr10 33173677 33173869 -112415419 - LTR50 LTR ERVL -571 224 4 1737 144 0 25 chr10 33173935 33174219 -112415069 - AluJo SINE Alu -32 280 4 430 331 41 14 chr10 33174232 33174522 -112414766 - L1ME LINE L1 -301 5820 5523 2285 90 7 0 chr10 33174554 33174853 -112414435 + AluSg SINE Alu 1 301 -9 50 0 0 0 chr10 33175414 33175464 -112413824 + AT_rich Low_complexity Low_complexity 1 50 0 306 87 20 101 chr10 33175464 33175613 -112413675 + (TTTTTA)n Simple_repeat Simple_repeat 1 137 0 36 0 0 0 chr10 33175613 33175649 -112413639 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr10 33175837 33175858 -112413430 + AT_rich Low_complexity Low_complexity 1 21 0 1517 195 61 10 chr10 33176688 33176985 -112412303 + AluJo SINE Alu 1 312 0 1680 177 4 0 chr10 33177579 33177845 -112411443 - AluSx SINE Alu -45 267 1 585 213 30 41 chr10 33178232 33178401 -112410887 + MIR SINE MIR 79 245 -17 594 209 37 37 chr10 33179623 33179757 -112409531 - MIR SINE MIR -122 140 7 326 225 28 0 chr10 33180832 33180903 -112408385 - MER117 DNA MER1_type -37 160 88 289 257 19 38 chr10 33181169 33181274 -112408014 + MER72 LTR ERV1 377 479 -243 377 162 27 203 chr10 33181319 33181534 -112407754 + LTR45B LTR ERV1 324 514 -11 1722 138 174 22 chr10 33182348 33182390 -112406898 + LTR47A LTR ERVL 37 71 -381 1708 204 0 7 chr10 33182390 33182694 -112406594 - AluJo SINE Alu -10 302 1 1722 138 174 22 chr10 33182694 33183012 -112406276 + LTR47A LTR ERVL 71 452 0 571 135 0 0 chr10 33183236 33183325 -112405963 - L1PB3 LINE L1 0 6154 6066 411 73 0 0 chr10 33183921 33183976 -112405312 + (CA)n Simple_repeat Simple_repeat 2 56 0 282 342 108 0 chr10 33186324 33186435 -112402853 + MIR3 SINE MIR 34 156 -52 295 382 15 8 chr10 33187151 33187282 -112402006 - MER5A DNA MER1_type -37 152 21 617 254 63 26 chr10 33188857 33189046 -112400242 + MIR SINE MIR 27 222 -40 4648 63 2 2 chr10 33189476 33190028 -112399260 - L1PA8 LINE L1 -14 6158 5607 323 96 19 0 chr10 33190702 33190754 -112398534 + (TTCC)n Simple_repeat Simple_repeat 2 54 0 953 147 0 13 chr10 33190804 33190954 -112398334 + FRAM SINE Alu 6 153 -23 2371 106 0 0 chr10 33191268 33191580 -112397708 + AluSx SINE Alu 1 312 0 577 110 0 24 chr10 33191594 33191676 -112397612 - MADE1 DNA Mariner 0 80 1 186 313 0 0 chr10 33191742 33191790 -112397498 - MIR SINE MIR -2 260 213 1557 289 92 4 chr10 33192097 33192598 -112396690 - MLT1H1 LTR MaLR -10 545 1 303 300 71 103 chr10 33192783 33193190 -112396098 - MLT1H1-int LTR MaLR -233 1138 745 246 271 146 10 chr10 33193616 33193712 -112395576 - MLT1H1-int LTR MaLR -830 541 433 2083 119 7 3 chr10 33193733 33194027 -112395261 - AluSg SINE Alu -15 295 1 542 42 0 0 chr10 33194239 33194311 -112394977 - L1PA2 LINE L1 0 6155 6084 516 235 13 13 chr10 33194311 33194460 -112394828 - L1M4 LINE L1 -3726 2420 2272 37760 34 24 2 chr10 33194470 33199852 -112389436 - L1PA2 LINE L1 0 6155 654 5073 49 21 0 chr10 33199851 33200479 -112388809 + L1PA2 LINE L1 4 644 -5502 * 1021 307 18 18 chr10 33200520 33200846 -112388442 - MLT1H1 LTR MaLR 0 555 230 1402 231 60 27 chr10 33200846 33201297 -112387991 + L1MEc LINE L1 1925 2390 -4006 3452 35 0 0 chr10 33201299 33201723 -112387565 - L1PA2 LINE L1 -760 5386 4963 7032 17 9 3 chr10 33201723 33202482 -112386806 + L1PA2 LINE L1 5386 6155 0 1126 225 22 44 chr10 33202497 33202861 -112386427 + L1MEc LINE L1 2341 2696 -3519 567 192 90 4 chr10 33202858 33203092 -112386196 + L1MEc LINE L1 3230 3483 -2732 * 241 287 40 0 chr10 33203177 33203278 -112386010 + L1MEc LINE L1 3474 3578 -2637 315 0 0 0 chr10 33203994 33204029 -112385259 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 239 298 0 0 chr10 33204477 33204534 -112384754 + CT-rich Low_complexity Low_complexity 1 57 0 2015 131 0 0 chr10 33206517 33206829 -112382459 + AluSx SINE Alu 1 312 0 273 338 97 43 chr10 33207312 33207703 -112381585 + L2 LINE L2 2866 3277 -36 198 284 37 73 chr10 33208685 33208794 -112380494 - L2 LINE L2 0 3272 3168 2173 103 0 4 chr10 33208795 33209111 -112380177 + AluSc SINE Alu 1 315 0 2359 88 7 0 chr10 33209313 33209607 -112379681 + AluSq SINE Alu 1 296 -17 377 306 24 18 chr10 33209756 33209926 -112379362 + MER5B DNA MER1_type 4 174 -4 2210 103 3 0 chr10 33211207 33211497 -112377791 - AluSx SINE Alu -21 291 1 240 264 359 0 chr10 33211615 33211774 -112377514 - MIR SINE MIR -10 252 37 1973 132 93 39 chr10 33211881 33211906 -112377382 + MSTB1 LTR MaLR 3 25 -407 2269 136 27 8 chr10 33211906 33212274 -112377014 + THE1C LTR MaLR 1 375 0 1973 132 93 39 chr10 33212274 33212656 -112376632 + MSTB1 LTR MaLR 25 432 0 432 228 89 24 chr10 33212658 33212781 -112376507 + MIR SINE MIR 65 195 -67 2614 64 0 0 chr10 33213713 33214024 -112375264 - AluY SINE Alu 0 311 1 28 0 0 0 chr10 33214243 33214271 -112375017 + AT_rich Low_complexity Low_complexity 1 28 0 863 210 13 0 chr10 33214272 33214429 -112374859 - AluJo SINE Alu -31 281 123 429 276 184 39 chr10 33214506 33214777 -112374511 + Charlie8 DNA MER1_type 118 348 -2069 1944 194 59 11 chr10 33214777 33215221 -112374067 - MLT1C LTR MaLR -1 466 2 429 276 184 39 chr10 33215221 33215242 -112374046 + Charlie8 DNA MER1_type 348 365 -2052 684 236 66 62 chr10 33215242 33215501 -112373787 + MIR SINE MIR 3 262 0 429 276 184 39 chr10 33215501 33215668 -112373620 + Charlie8 DNA MER1_type 365 645 -1772 243 180 20 0 chr10 33215694 33215744 -112373544 + Charlie8 DNA MER1_type 1353 1403 -1014 770 241 101 31 chr10 33216445 33216731 -112372557 - MLT1K LTR MaLR 0 588 283 1546 108 8 38 chr10 33217053 33217293 -112371995 - AluSc SINE Alu 0 309 77 1804 176 98 54 chr10 33217293 33217867 -112371421 + pTR5 LTR ERV1 746 1344 -1094 4684 117 62 47 chr10 33217883 33218693 -112370595 + LTR12 LTR ERV1 5 826 0 533 169 0 0 chr10 33218693 33218776 -112370512 - AluY SINE Alu -228 83 1 284 300 80 20 chr10 33218979 33219179 -112370109 + HAL1 LINE L1 307 518 -1989 22 0 0 0 chr10 33219387 33219409 -112369879 + AT_rich Low_complexity Low_complexity 1 22 0 363 305 68 17 chr10 33220070 33220188 -112369100 - MIR SINE MIR -64 144 21 277 346 0 0 chr10 33220749 33220853 -112368435 - MER94 DNA DNA -30 104 1 2110 116 38 0 chr10 33221208 33221501 -112367787 - AluSg SINE Alu -6 304 1 743 202 55 37 chr10 33221591 33221809 -112367479 - L1ME2 LINE L1 0 6164 5943 469 299 25 70 chr10 33222609 33222923 -112366365 + L1MC/D LINE L1 4078 4377 -1769 1636 196 153 12 chr10 33222939 33223274 -112366014 - L1MD3 LINE L1 -104 7891 7484 2474 152 50 7 chr10 33223274 33223716 -112365572 + LOR1b LTR ERV1 1 461 0 1636 196 153 12 chr10 33223716 33223798 -112365490 - L1MD3 LINE L1 -511 7484 7415 368 241 64 97 chr10 33224165 33224476 -112364812 + L1M4 LINE L1 4744 5044 -1102 324 169 0 0 chr10 33224618 33224683 -112364605 + Charlie2 DNA MER1_type 2667 2731 -131 1873 214 83 13 chr10 33224710 33225028 -112364260 - Charlie2a DNA MER1_type -826 2036 1665 2256 113 0 3 chr10 33225028 33225337 -112363951 - AluSq SINE Alu -5 308 1 1873 214 83 13 chr10 33225337 33225547 -112363741 - Charlie2a DNA MER1_type -1197 1665 1471 1066 254 233 16 chr10 33225605 33226164 -112363124 - Charlie2b DNA MER1_type -2099 683 4 233 235 176 42 chr10 33226325 33226444 -112362844 + HAL1b LINE L1 318 452 -896 27 29 0 0 chr10 33226542 33226576 -112362712 + AT_rich Low_complexity Low_complexity 1 34 0 1224 168 0 0 chr10 33228077 33228279 -112361009 + AluSg/x SINE Alu 109 310 0 2117 219 99 53 chr10 33229389 33230731 -112358557 + L1MC/D LINE L1 4406 5831 -361 440 191 124 67 chr10 33230719 33230897 -112358391 + L1ME2 LINE L1 5967 6154 -10 * 244 152 51 51 chr10 33231118 33231197 -112358091 + L1ME LINE L1 5715 5793 -369 21 36 0 0 chr10 33233041 33233069 -112356219 + AT_rich Low_complexity Low_complexity 1 28 0 1715 189 91 67 chr10 33233256 33233807 -112355481 - L1MD2 LINE L1 -2 6357 5794 620 353 76 32 chr10 33234309 33235094 -112354194 - L2 LINE L2 -154 3118 2295 522 278 40 7 chr10 33235127 33235278 -112354010 - MIR SINE MIR -105 157 2 635 323 137 43 chr10 33235304 33236209 -112353079 - L2 LINE L2 -1027 2287 1298 9343 193 58 37 chr10 33239492 33240616 -112348672 + L1M4 LINE L1 2616 3715 -2463 2043 147 0 0 chr10 33240616 33240915 -112348373 + AluSq SINE Alu 2 300 -13 9343 193 58 37 chr10 33240915 33242740 -112346548 + L1M4 LINE L1 3715 5627 -551 594 346 97 30 chr10 33242826 33243604 -112345684 - L2 LINE L2 -27 3245 2420 7397 110 80 51 chr10 33244536 33246447 -112342841 + pTR5 LTR ERV1 17 2438 0 896 59 0 0 chr10 33246452 33246571 -112342717 + pTR5 LTR ERV1 274 392 -2046 807 289 23 5 chr10 33247175 33247393 -112341895 + MIR SINE MIR 35 256 -6 205 220 102 17 chr10 33247519 33247578 -112341710 - MIR SINE MIR -169 93 30 1066 236 46 0 chr10 33247600 33247884 -112341404 + MER58B DNA MER1_type 45 341 0 221 378 67 0 chr10 33248702 33248792 -112340496 - L2 LINE L2 -44 3228 3133 280 263 30 0 chr10 33249287 33249386 -112339902 + (TA)n Simple_repeat Simple_repeat 1 102 0 23 54 0 0 chr10 33249877 33249914 -112339374 + AT_rich Low_complexity Low_complexity 1 37 0 509 271 30 20 chr10 33250840 33251039 -112338249 - Tigger8 DNA MER2_type -188 478 278 4458 152 26 43 chr10 33251039 33251567 -112337721 - L1MB2 LINE L1 -11 6160 5660 2230 92 20 3 chr10 33251567 33251870 -112337418 - AluY SINE Alu -3 308 1 4458 152 26 43 chr10 33251870 33252424 -112336864 - L1MB2 LINE L1 -511 5660 5098 534 268 89 5 chr10 33252468 33252658 -112336630 - Tigger8 DNA MER2_type -393 273 68 715 291 143 9 chr10 33254750 33255100 -112334188 + L1MC4a LINE L1 5517 5913 -1895 1391 116 116 101 chr10 33255405 33255733 -112333555 + MER44D DNA MER2_type 1 603 -6 22 70 0 0 chr10 33256322 33256365 -112332923 + AT_rich Low_complexity Low_complexity 1 43 0 817 283 122 25 chr10 33256525 33256928 -112332360 + HAL1 LINE L1 1113 1554 -953 658 236 0 12 chr10 33256979 33257144 -112332144 + HAL1 LINE L1 2237 2399 -108 242 297 144 9 chr10 33257229 33257340 -112331948 - L2 LINE L2 -615 2699 2574 264 59 0 0 chr10 33257773 33257807 -112331481 + (T)n Simple_repeat Simple_repeat 1 34 0 291 274 62 62 chr10 33257906 33258052 -112331236 - MIR SINE MIR -50 212 67 1886 126 19 0 chr10 33258186 33258456 -112330832 + AluSx SINE Alu 2 276 -36 201 128 0 51 chr10 33258456 33258495 -112330793 + (GGAGA)n Simple_repeat Simple_repeat 5 41 0 4433 108 9 14 chr10 33258854 33259519 -112329769 + L1PA13 LINE L1 5494 6155 -8 210 37 0 0 chr10 33259519 33259546 -112329742 + (TG)n Simple_repeat Simple_repeat 2 28 0 1291 243 146 30 chr10 33259650 33260123 -112329165 + L1ME1 LINE L1 5543 6070 -96 2286 204 63 25 chr10 33260123 33260203 -112329085 - MER74B LTR ERVL 0 622 546 2153 72 0 56 chr10 33260203 33260509 -112328779 + AluSg SINE Alu 1 289 -21 2286 204 63 25 chr10 33260509 33260987 -112328301 - MER74B LTR ERVL -76 546 43 276 145 174 29 chr10 33260990 33261059 -112328229 + L1ME1 LINE L1 6082 6160 -6 2250 136 14 8 chr10 33261106 33261467 -112327821 + MER47A DNA MER2_type 4 366 0 749 293 48 26 chr10 33261822 33262095 -112327193 - L3 LINE CR1 -163 1414 1136 281 239 252 32 chr10 33262274 33262429 -112326859 + MIR SINE MIR 47 235 -27 23 78 0 0 chr10 33263596 33263647 -112325641 + AT_rich Low_complexity Low_complexity 1 51 0 1271 166 32 108 chr10 33263987 33264301 -112324987 - AluJb SINE Alu -11 291 2 23 48 0 48 chr10 33264338 33264401 -112324887 + AT_rich Low_complexity Low_complexity 1 60 0 422 293 121 39 chr10 33264495 33264826 -112324462 - L1ME LINE L1 -446 5675 5318 1431 260 62 45 chr10 33265018 33265571 -112323717 - L1ME1 LINE L1 -7 6159 5598 * 3897 251 62 29 chr10 33265569 33267358 -112321930 - L1P LINE L1 -743 5403 3519 2398 102 0 0 chr10 33267429 33267742 -112321546 - AluSp SINE Alu 0 313 1 2877 251 91 16 chr10 33267763 33268859 -112320429 - L1MEc LINE L1 -4869 1527 349 759 202 6 23 chr10 33268910 33268966 -112320322 - L1MEc LINE L1 -6191 205 150 2727 180 223 56 chr10 33268966 33269839 -112319449 - LTR28 LTR ERV1 0 1020 2 759 202 6 23 chr10 33269839 33269955 -112319333 - L1MEc LINE L1 -6246 150 36 27 29 0 0 chr10 33269985 33270019 -112319269 + AT_rich Low_complexity Low_complexity 1 34 0 227 250 103 52 chr10 33270162 33270278 -112319010 - L1ME4a LINE L1 -32 6089 5968 29 0 0 0 chr10 33270995 33271024 -112318264 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr10 33271395 33271423 -112317865 + AT_rich Low_complexity Low_complexity 1 28 0 497 302 88 44 chr10 33271754 33271959 -112317329 + MIR SINE MIR 30 243 -19 442 293 102 18 chr10 33272389 33272556 -112316732 + MIR3 SINE MIR 7 187 -21 253 270 16 16 chr10 33272953 33273016 -112316272 - MIR SINE MIR -152 110 48 52 82 0 0 chr10 33273023 33273145 -112316143 + AT_rich Low_complexity Low_complexity 1 122 0 186 103 0 0 chr10 33273316 33273345 -112315943 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 21 0 0 0 chr10 33273366 33273387 -112315901 + AT_rich Low_complexity Low_complexity 1 21 0 1866 163 0 3 chr10 33273441 33273724 -112315564 + AluJo SINE Alu 1 282 -30 441 0 0 0 chr10 33273727 33273776 -112315512 + (TA)n Simple_repeat Simple_repeat 1 49 0 2401 83 0 0 chr10 33275120 33275422 -112313866 - AluY SINE Alu -9 302 1 2008 114 3 88 chr10 33275435 33275777 -112313511 - AluSq SINE Alu 0 313 1 247 248 144 32 chr10 33276897 33277022 -112312266 + MIR SINE MIR 15 153 -109 2862 220 14 24 chr10 33277056 33277714 -112311574 + MER82 DNA MER2_type 3 653 0 2353 99 0 3 chr10 33278486 33278800 -112310488 - AluSq SINE Alu 0 313 1 2305 98 0 3 chr10 33279520 33279817 -112309471 + AluSq SINE Alu 1 296 -17 24 0 0 0 chr10 33280034 33280058 -112309230 + AT_rich Low_complexity Low_complexity 1 24 0 567 167 10 0 chr10 33280291 33280387 -112308901 - Charlie1 DNA MER1_type 0 2761 2665 1259 83 0 0 chr10 33280517 33280686 -112308602 - L1PB1 LINE L1 -202 5949 5781 324 301 111 7 chr10 33280696 33280849 -112308439 - MIR SINE MIR -67 195 27 366 282 55 55 chr10 33280887 33281050 -112308238 - MIR SINE MIR -91 171 9 710 231 119 61 chr10 33282031 33282298 -112306990 + LTR16A1 LTR ERVL 127 416 -41 2284 123 0 0 chr10 33282298 33282608 -112306680 + AluSx SINE Alu 1 310 -2 710 231 119 61 chr10 33282608 33282652 -112306636 + LTR16A1 LTR ERVL 416 456 -1 254 169 31 31 chr10 33282793 33282858 -112306430 - L1ME LINE L1 -575 5587 5523 2270 102 3 0 chr10 33283519 33283824 -112305464 - AluSq SINE Alu -5 308 3 1969 136 4 0 chr10 33284145 33284461 -112304827 + AluSx SINE Alu 1 317 0 1421 122 67 52 chr10 33284525 33284795 -112304493 + Tigger2a DNA MER2_type 1 274 -160 1104 146 96 9 chr10 33284796 33285016 -112304272 - MSTA LTR MaLR -1 427 189 2394 72 0 3 chr10 33285016 33285307 -112303981 - AluSc SINE Alu -16 293 4 602 254 53 74 chr10 33285313 33285415 -112303873 - MIR SINE MIR -11 251 148 2206 125 0 0 chr10 33285415 33285712 -112303576 - AluSg SINE Alu -13 297 1 602 254 53 74 chr10 33285712 33285853 -112303435 - MIR SINE MIR -114 148 13 264 311 10 0 chr10 33285879 33285982 -112303306 - L1MC/D LINE L1 -2036 5772 5669 1670 177 0 27 chr10 33288134 33288428 -112300860 + AluJo SINE Alu 3 288 -24 366 320 16 24 chr10 33288988 33289113 -112300175 - L2 LINE L2 -9 3304 3181 1395 209 39 26 chr10 33289171 33289478 -112299810 - MLT2C1 LTR ERVL -53 344 34 2780 230 30 5 chr10 33289483 33290109 -112299179 + L1MEc LINE L1 263 904 -5492 231 250 125 58 chr10 33290256 33290376 -112298912 - MLT1J LTR MaLR -55 456 329 1601 131 0 0 chr10 33290580 33290802 -112298486 + AluSx SINE Alu 1 222 -90 226 188 125 0 chr10 33290877 33290925 -112298363 - MER5A DNA MER1_type -135 54 1 675 213 0 0 chr10 33290930 33291052 -112298236 + FLAM_C SINE Alu 3 124 -9 249 33 0 0 chr10 33291069 33291099 -112298189 + Alu SINE Alu 260 289 -13 236 77 26 0 chr10 33292042 33292081 -112297207 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 2592 53 0 0 chr10 33293127 33293429 -112295859 - AluY SINE Alu -9 302 1 2363 84 0 3 chr10 33293609 33293905 -112295383 - AluSc SINE Alu -14 295 1 21 0 0 0 chr10 33293979 33294000 -112295288 + AT_rich Low_complexity Low_complexity 1 21 0 10874 139 13 25 chr10 33294957 33296535 -112292753 - L1MA4A LINE L1 -5 6298 4702 2158 132 3 6 chr10 33296535 33296846 -112292442 + AluSq SINE Alu 1 310 -3 10874 139 13 25 chr10 33296846 33297983 -112291305 - L1MA4A LINE L1 -1601 4702 3552 2077 96 0 11 chr10 33297983 33298255 -112291033 - AluSc SINE Alu -40 269 1 10874 139 13 25 chr10 33298255 33298537 -112290751 - L1MA4A LINE L1 -2751 3552 3340 1866 94 3 118 chr10 33298537 33298877 -112290411 - AluSg SINE Alu -9 301 1 10874 139 13 25 chr10 33298877 33298964 -112290324 - L1MA4A LINE L1 -2963 3340 3253 4897 133 16 33 chr10 33299290 33300203 -112289085 - pTR5 LTR ERV1 -797 1641 744 1414 161 18 37 chr10 33300204 33300477 -112288811 + THE1B LTR MaLR 97 364 0 462 138 12 0 chr10 33300970 33301050 -112288238 + L1PA16 LINE L1 6070 6150 -16 1535 167 29 40 chr10 33301067 33301412 -112287876 + AluJo SINE Alu 13 354 0 1854 131 4 0 chr10 33301468 33301736 -112287552 - AluSx SINE Alu -9 303 35 23 0 0 0 chr10 33302210 33302233 -112287055 + AT_rich Low_complexity Low_complexity 1 23 0 609 240 86 27 chr10 33302379 33302627 -112286661 + MLT1I LTR MaLR 72 299 -110 1120 286 70 25 chr10 33302677 33303117 -112286171 - LTR40c LTR ERVL -5 460 1 284 219 114 29 chr10 33303117 33303192 -112286096 + MLT1J2 LTR MaLR 334 417 -33 240 273 86 0 chr10 33303233 33303361 -112285927 - L1 LINE L1 -1828 4318 4180 925 262 81 20 chr10 33303457 33303755 -112285533 + LTR50 LTR ERVL 1 316 -479 1013 208 123 7 chr10 33303799 33304068 -112285220 + LTR50 LTR ERVL 496 795 0 282 259 68 14 chr10 33304148 33304295 -112284993 - L1 LINE L1 -2188 3958 3804 222 287 7 28 chr10 33304344 33304487 -112284801 + (TA)n Simple_repeat Simple_repeat 1 140 0 187 274 20 0 chr10 33304687 33304738 -112284550 + L2 LINE L2 3261 3312 -1 180 0 0 0 chr10 33306222 33306242 -112283046 + (TG)n Simple_repeat Simple_repeat 2 21 0 2346 78 7 26 chr10 33306284 33306593 -112282695 - AluSx SINE Alu -9 303 1 394 241 173 0 chr10 33307489 33307622 -112281666 - MER117 DNA MER1_type -40 157 2 2327 110 0 0 chr10 33308062 33308363 -112280925 + AluSx SINE Alu 1 301 -11 25 0 0 50 chr10 33309526 33309548 -112279740 + AT_rich Low_complexity Low_complexity 1 22 -16 1939 78 0 4 chr10 33309548 33309804 -112279484 + L1PB1 LINE L1 5892 6146 -5 25 0 0 50 chr10 33309804 33309821 -112279467 + AT_rich Low_complexity Low_complexity 22 38 0 194 310 56 14 chr10 33309860 33309931 -112279357 + MER5B DNA MER1_type 103 176 -2 2446 63 23 0 chr10 33311342 33311770 -112277518 - L1P3 LINE L1 -681 5491 5057 584 73 0 0 chr10 33311770 33311850 -112277438 + L1PA8 LINE L1 6091 6172 0 221 205 0 77 chr10 33313795 33313873 -112275415 + MIR SINE MIR 141 212 -50 2183 92 17 20 chr10 33314434 33314726 -112274562 - AluSx SINE Alu -21 291 1 975 214 6 0 chr10 33314770 33314943 -112274345 + MER45A DNA AcHobo 1 174 -4 440 286 126 34 chr10 33315444 33315656 -112273632 - L2 LINE L2 -51 3262 3071 1674 124 75 14 chr10 33315656 33315938 -112273350 + AluJo SINE Alu 1 299 -13 440 286 126 34 chr10 33315938 33316341 -112272947 - L2 LINE L2 -242 3071 2599 1759 170 3 32 chr10 33316622 33316934 -112272354 + AluJo SINE Alu 1 303 -9 1533 186 17 33 chr10 33317503 33317804 -112271484 + AluJo SINE Alu 1 296 -16 2291 89 6 16 chr10 33317938 33318251 -112271037 + AluSg SINE Alu 1 310 0 21 36 0 0 chr10 33319101 33319129 -112270159 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr10 33319161 33319183 -112270105 + AT_rich Low_complexity Low_complexity 1 22 0 41043 33 1 1 chr10 33319183 33324805 -112264483 - L1PA3 LINE L1 -3 6152 533 2222 146 22 36 chr10 33324909 33325372 -112263916 - MSTA LTR MaLR 0 426 6 190 233 0 82 chr10 33325390 33325463 -112263825 - MIR SINE MIR -12 250 184 696 257 23 6 chr10 33325791 33325966 -112263322 - MIR SINE MIR -49 213 36 22 0 0 0 chr10 33326222 33326244 -112263044 + AT_rich Low_complexity Low_complexity 1 22 0 442 275 18 18 chr10 33327846 33328017 -112261271 - L1MEd LINE L1 -5054 1065 895 379 325 45 45 chr10 33328341 33328630 -112260658 - L1MEd LINE L1 -5577 542 254 1492 155 20 82 chr10 33328754 33329057 -112260231 + AluJo SINE Alu 1 284 -28 1814 174 0 13 chr10 33329718 33330028 -112259260 + AluJo SINE Alu 1 306 -6 258 336 27 9 chr10 33330346 33330456 -112258832 + MIR3 SINE MIR 49 160 -48 959 168 24 67 chr10 33330463 33330628 -112258660 + MER58A DNA MER1_type 26 182 -2238 2306 106 0 3 chr10 33330628 33330930 -112258358 + AluSx SINE Alu 1 301 -11 959 168 24 67 chr10 33330930 33330972 -112258316 + MER58A DNA MER1_type 182 224 0 1405 171 86 21 chr10 33332519 33332799 -112256489 - AluJo SINE Alu -14 298 1 1938 158 7 0 chr10 33335668 33335965 -112253323 + AluSx SINE Alu 1 299 -13 220 322 78 9 chr10 33337244 33337359 -112251929 - L2 LINE L2 0 3272 3150 231 244 71 71 chr10 33338953 33339080 -112250208 + Charlie5 DNA MER1_type 2256 2382 -230 1247 259 51 22 chr10 33339321 33339676 -112249612 - LTR16A LTR ERVL -58 392 28 251 356 17 8 chr10 33339804 33339922 -112249366 - HERV16 LTR ERVL -91 4905 4787 * 1889 335 43 39 chr10 33339891 33341080 -112248208 - ERVL LTR ERVL -441 5323 4130 768 256 137 59 chr10 33341127 33341552 -112247736 - ERVL LTR ERVL -1277 3719 3262 602 310 31 0 chr10 33341557 33341815 -112247473 - ERVL LTR ERVL -2211 3553 3288 2380 95 0 0 chr10 33342428 33342722 -112246566 + AluSg SINE Alu 1 294 -16 365 286 41 29 chr10 33342733 33342904 -112246384 - LTR16C LTR ERVL -3 488 316 1649 153 0 4 chr10 33343825 33344080 -112245208 + AluJo SINE Alu 42 295 -17 23 78 0 0 chr10 33344453 33344504 -112244784 + AT_rich Low_complexity Low_complexity 1 51 0 404 267 52 0 chr10 33344537 33344672 -112244616 - MIR SINE MIR -74 188 47 1679 147 0 29 chr10 33344721 33344993 -112244295 - AluSx SINE Alu -16 296 33 295 224 0 0 chr10 33345231 33345289 -112243999 - MER103 DNA DNA -61 105 48 207 162 0 0 chr10 33346056 33346093 -112243195 + GA-rich Low_complexity Low_complexity 4 40 0 27 0 0 0 chr10 33347775 33347802 -112241486 + AT_rich Low_complexity Low_complexity 1 27 0 1722 160 3 33 chr10 33348290 33348497 -112240791 - AluJo SINE Alu -19 293 81 225 0 0 0 chr10 33348497 33348522 -112240766 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1878 129 41 0 chr10 33348522 33348793 -112240495 - AluSg SINE Alu -28 282 1 1722 160 3 33 chr10 33348793 33348884 -112240404 - AluJo SINE Alu -229 83 3 453 255 82 36 chr10 33348941 33349137 -112240151 - L3 LINE CR1 -263 1314 1110 272 272 165 0 chr10 33349384 33349487 -112239801 - MIR SINE MIR -78 184 65 190 171 24 0 chr10 33350555 33350596 -112238692 + L2 LINE L2 3272 3313 0 490 128 0 12 chr10 33350656 33350742 -112238546 + L1MB3 LINE L1 5937 6021 -162 1645 150 66 22 chr10 33350772 33351046 -112238242 - AluJo SINE Alu -26 286 1 856 128 21 21 chr10 33351046 33351187 -112238101 + L1MB3 LINE L1 6005 6145 -38 328 75 0 0 chr10 33351343 33351396 -112237892 + L1MB4 LINE L1 6127 6179 -1 282 292 81 42 chr10 33351397 33351596 -112237692 - L1ME LINE L1 -470 5651 5461 198 71 0 0 chr10 33351596 33351624 -112237664 + (CA)n Simple_repeat Simple_repeat 2 29 0 282 292 81 42 chr10 33351624 33351847 -112237441 - L1ME LINE L1 -660 5461 5213 361 225 210 7 chr10 33352581 33352719 -112236569 + MIR SINE MIR 56 221 -41 193 359 26 13 chr10 33354005 33354083 -112235205 - L2 LINE L2 -20 3252 3174 1937 164 0 6 chr10 33354085 33354397 -112234891 - AluJb SINE Alu -2 310 1 274 273 0 0 chr10 33355424 33355490 -112233798 - L2 LINE L2 0 3313 3248 1785 158 3 18 chr10 33355607 33355892 -112233396 + AluJo SINE Alu 1 281 -31 186 43 0 0 chr10 33355895 33355918 -112233370 + (TAA)n Simple_repeat Simple_repeat 2 24 0 221 313 0 0 chr10 33355950 33356014 -112233274 - MER5B DNA MER1_type -69 109 46 2330 159 36 12 chr10 33356262 33356678 -112232610 + MSTB LTR MaLR 1 426 0 2445 217 86 5 chr10 33357519 33358127 -112231161 - L1MA3 LINE L1 -275 6030 5374 309 109 0 0 chr10 33359547 33359593 -112229695 + (CA)n Simple_repeat Simple_repeat 2 47 0 1809 181 10 3 chr10 33360616 33360915 -112228373 + AluJb SINE Alu 1 301 -11 955 112 0 15 chr10 33360931 33361065 -112228223 + FLAM_C SINE Alu 12 143 0 2968 158 12 21 chr10 33361183 33361858 -112227430 + L1MA4A LINE L1 5570 6299 -4 346 254 64 0 chr10 33361863 33361973 -112227315 + MIR SINE MIR 136 252 -10 2022 101 0 31 chr10 33362563 33362850 -112226438 + AluSq SINE Alu 25 302 -11 2211 120 3 0 chr10 33364559 33364851 -112224437 - AluSp SINE Alu -20 293 1 644 150 0 53 chr10 33364858 33364991 -112224297 - L1PB4 LINE L1 -12 6144 6019 2278 159 28 44 chr10 33366819 33367038 -112222250 - MSTB1 LTR MaLR -2 430 220 2467 71 0 3 chr10 33367038 33367335 -112221953 + AluY SINE Alu 1 296 -15 2278 159 28 44 chr10 33367335 33367549 -112221739 - MSTB1 LTR MaLR -212 220 4 759 197 0 0 chr10 33367960 33368087 -112221201 - MER7A DNA MER2_type -39 297 171 308 297 0 0 chr10 33368270 33368361 -112220927 + LTR58 LTR ERV1 360 450 -229 687 192 56 111 chr10 33368593 33368687 -112220601 - MER7A DNA MER2_type -2852 186 88 1885 174 3 0 chr10 33368687 33368985 -112220303 + AluJb SINE Alu 1 299 -13 687 192 56 111 chr10 33368985 33369010 -112220278 - MER7A DNA MER2_type -2950 88 63 2175 122 0 7 chr10 33369010 33369305 -112219983 + AluSq SINE Alu 1 293 -20 687 192 56 111 chr10 33369305 33369382 -112219906 - MER7A DNA MER2_type -2975 63 2 1163 182 21 0 chr10 33371169 33371356 -112217932 + MER58A DNA MER1_type 34 224 0 1947 76 3 99 chr10 33371396 33371700 -112217588 - AluY SINE Alu -2 309 35 1574 168 22 6 chr10 33372354 33372657 -112216631 - L1MA9 LINE L1 -12 7698 7398 10636 208 52 29 chr10 33372668 33372733 -112216555 - L1MA9 LINE L1 -439 7271 7209 234 0 0 0 chr10 33372733 33372759 -112216529 + (TG)n Simple_repeat Simple_repeat 2 27 0 10636 208 52 29 chr10 33372759 33372774 -112216514 - L1MA9 LINE L1 -501 7209 7196 553 100 10 10 chr10 33372774 33372874 -112216414 + (TCTA)n Simple_repeat Simple_repeat 2 101 0 10636 208 52 29 chr10 33372874 33375915 -112213373 - L1MA9 LINE L1 -514 7196 3163 2074 95 25 77 chr10 33375915 33376242 -112213046 - AluSg SINE Alu 0 310 1 10636 208 52 29 chr10 33376242 33376489 -112212799 - L1MA9 LINE L1 -4547 3163 2923 380 53 0 35 chr10 33376489 33376546 -112212742 - MLT2A1 LTR ERVL 0 453 399 262 87 72 29 chr10 33376561 33376699 -112212589 + (TA)n Simple_repeat Simple_repeat 2 145 0 2902 69 44 5 chr10 33376699 33377088 -112212200 - MLT2A1 LTR ERVL -40 404 1 2366 200 96 29 chr10 33377088 33377929 -112211359 - L1M2 LINE L1 -4312 2856 2006 372 22 0 0 chr10 33377929 33377974 -112211314 + (TG)n Simple_repeat Simple_repeat 2 46 0 2366 200 96 29 chr10 33377974 33378069 -112211219 - L1M2 LINE L1 -5162 2006 1919 470 316 61 77 chr10 33378501 33378944 -112210344 - L1M2 LINE L1 -6727 441 6 1312 210 50 55 chr10 33378944 33379287 -112210001 + MLT1A1 LTR MaLR 25 365 0 364 167 17 0 chr10 33379291 33379351 -112209937 - MLT1E2 LTR MaLR -565 61 1 299 261 56 14 chr10 33379588 33379730 -112209558 - MER69 DNA AcHobo -4 2522 2375 1171 174 5 40 chr10 33379735 33379959 -112209329 + AluJb SINE Alu 88 303 -9 1197 209 52 41 chr10 33379959 33380322 -112208966 - MER69 DNA AcHobo -143 2383 2017 992 245 37 4 chr10 33380375 33380620 -112208668 - MER69 DNA AcHobo -465 761 509 1419 224 87 61 chr10 33380649 33381073 -112208215 - MER69 DNA AcHobo -791 435 1 2141 117 0 37 chr10 33381273 33381598 -112207690 + AluSq SINE Alu 1 313 0 3157 183 8 16 chr10 33381600 33382228 -112207060 + L1MB4 LINE L1 5551 6173 -7 718 179 0 24 chr10 33382360 33382483 -112206805 + FLAM_A SINE Alu 5 124 -9 2362 102 3 13 chr10 33382600 33382915 -112206373 + AluSp SINE Alu 1 312 -1 1479 63 5 44 chr10 33383395 33383432 -112205856 + MER107 DNA MER1_type 1 38 -159 2032 143 47 14 chr10 33383432 33383795 -112205493 - THE1C LTR MaLR 0 375 1 1479 63 5 44 chr10 33383795 33383962 -112205326 + MER107 DNA MER1_type 38 197 0 1164 232 47 56 chr10 33383986 33384368 -112204920 - MLT1J2 LTR MaLR -6 440 53 1039 241 196 6 chr10 33385761 33386093 -112203195 - MLT1L LTR MaLR -73 542 148 536 249 164 24 chr10 33386094 33386259 -112203029 - MER5A DNA MER1_type -1 188 1 22 0 0 0 chr10 33386419 33386441 -112202847 + AT_rich Low_complexity Low_complexity 1 22 0 2987 230 54 68 chr10 33386998 33388182 -112201106 - L1M4 LINE L1 -1022 5124 3957 3549 236 42 28 chr10 33388187 33389165 -112200123 - L1MEc LINE L1 -5142 1254 263 1425 209 39 26 chr10 33389170 33389477 -112199811 + MLT2C1 LTR ERVL 34 344 -53 325 320 16 24 chr10 33389535 33389660 -112199628 + L2 LINE L2 3181 3304 -9 1677 179 0 27 chr10 33390220 33390516 -112198772 - AluJo SINE Alu -24 288 1 283 311 10 0 chr10 33392666 33392769 -112196519 + L1MC/D LINE L1 5669 5772 -2036 538 254 53 74 chr10 33392795 33392936 -112196352 + MIR SINE MIR 13 148 -114 2245 122 0 0 chr10 33392936 33393232 -112196056 + AluSg SINE Alu 1 296 -14 538 254 53 74 chr10 33393232 33393334 -112195954 + MIR SINE MIR 148 251 -11 2290 90 0 0 chr10 33393340 33393646 -112195642 + AluSc SINE Alu 4 309 0 273 57 0 0 chr10 33393902 33393937 -112195351 + (CA)n Simple_repeat Simple_repeat 2 36 0 1398 251 78 10 chr10 33394031 33394414 -112194874 - LTR16A LTR ERVL -13 437 29 2268 120 3 0 chr10 33394484 33394793 -112194495 - AluSx SINE Alu -1 311 2 247 183 108 97 chr10 33395341 33395434 -112193854 + Charlie7 DNA MER1_type 107 200 -2412 1772 167 10 3 chr10 33395590 33395883 -112193405 - AluSx SINE Alu -17 295 1 2112 108 0 17 chr10 33395888 33396185 -112193103 - AluSc SINE Alu -17 292 1 1372 177 16 0 chr10 33396235 33396483 -112192805 + L1MD3 LINE L1 7739 7990 -5 3475 243 109 58 chr10 33396484 33397155 -112192133 + Charlie7 DNA MER1_type 592 1228 -1384 2611 57 0 0 chr10 33397155 33397456 -112191832 + AluY SINE Alu 1 301 -10 3475 243 109 58 chr10 33397456 33398329 -112190959 + Charlie7 DNA MER1_type 1228 2230 -382 1593 148 72 34 chr10 33398329 33398620 -112190668 + AluJb SINE Alu 1 302 -10 3475 243 109 58 chr10 33398620 33398755 -112190533 + Charlie7 DNA MER1_type 2230 2357 -255 21 57 0 0 chr10 33398776 33398811 -112190477 + AT_rich Low_complexity Low_complexity 1 35 0 234 220 0 0 chr10 33398871 33398921 -112190367 + Charlie7 DNA MER1_type 2532 2581 -31 254 294 24 12 chr10 33399135 33399220 -112190068 - MER5A DNA MER1_type -47 142 57 296 323 0 20 chr10 33399232 33399331 -112189957 - MIR SINE MIR -60 148 52 207 0 0 0 chr10 33401628 33401651 -112187637 + (GA)n Simple_repeat Simple_repeat 2 24 0 2776 85 21 94 chr10 33403000 33403481 -112185807 - L1PA11 LINE L1 0 6174 5729 403 203 9 53 chr10 33403819 33403950 -112185338 - L1PA11 LINE L1 -337 5837 5732 530 115 13 0 chr10 33404599 33404677 -112184611 - AluJb SINE Alu -55 257 179 208 180 0 98 chr10 33405831 33405892 -112183396 - L2 LINE L2 -226 3046 2992 482 154 0 0 chr10 33405903 33405981 -112183307 - MSTC LTR MaLR 0 428 351 315 71 0 0 chr10 33405981 33406023 -112183265 + (TTCC)n Simple_repeat Simple_repeat 1 42 0 1810 186 3 3 chr10 33406023 33406319 -112182969 - AluJo SINE Alu -14 298 3 850 117 131 0 chr10 33406321 33406466 -112182822 - MSTC LTR MaLR -63 365 202 336 132 0 0 chr10 33406467 33406520 -112182768 - MSTC LTR MaLR -375 53 1 368 239 263 32 chr10 33407026 33407277 -112182011 + L2 LINE L2 3002 3310 -3 1598 161 15 11 chr10 33407282 33407555 -112181733 + AluJo SINE Alu 25 298 -14 362 262 57 16 chr10 33407678 33407800 -112181488 - MIR SINE MIR -2 260 134 378 297 110 77 chr10 33407976 33408313 -112180975 - L1MC4a LINE L1 -1861 5947 5600 1154 226 133 11 chr10 33408418 33408772 -112180516 + LTR16C LTR ERVL 93 489 -2 2263 68 0 4 chr10 33409035 33409313 -112179975 + AluSc SINE Alu 1 277 -32 309 26 0 0 chr10 33409314 33409352 -112179936 + (CAA)n Simple_repeat Simple_repeat 1 38 0 688 274 102 21 chr10 33409459 33409929 -112179359 - L1MC/D LINE L1 -2034 5774 5267 304 313 116 44 chr10 33409934 33410209 -112179079 - L1MC/D LINE L1 -883 5263 4969 735 152 4 13 chr10 33410280 33410536 -112178752 + AluJo SINE Alu 10 297 -15 968 231 146 0 chr10 33410646 33411020 -112178268 - MER63B DNA MER1_type 0 434 1 2735 133 0 22 chr10 33412227 33412671 -112176617 + Tigger2a DNA MER2_type 1 434 0 3132 277 106 26 chr10 33413309 33413553 -112175735 + L2 LINE L2 593 816 -2498 1744 188 50 72 chr10 33413553 33414069 -112175219 + MLT1D LTR MaLR 1 505 0 3132 277 106 26 chr10 33414069 33415104 -112174184 + L2 LINE L2 816 1975 -1339 938 263 67 43 chr10 33415104 33415662 -112173626 + L2 LINE L2 2597 3164 -149 383 235 49 12 chr10 33415666 33415692 -112173596 + (TA)n Simple_repeat Simple_repeat 1 25 -143 1782 195 14 3 chr10 33415692 33416036 -112173252 + MER7A DNA MER2_type 1 346 0 383 235 49 12 chr10 33416036 33416171 -112173117 + (TA)n Simple_repeat Simple_repeat 25 168 0 424 246 103 32 chr10 33416171 33416297 -112172991 + L2 LINE L2 3178 3312 -1 369 250 174 14 chr10 33417897 33418041 -112171247 + MIR SINE MIR 60 226 -36 2330 123 88 20 chr10 33418109 33418506 -112170782 - MSTB LTR MaLR 0 426 3 2790 130 2 65 chr10 33418794 33419318 -112169970 + L1PB1 LINE L1 5658 6148 -3 180 0 0 0 chr10 33419674 33419694 -112169594 + (A)n Simple_repeat Simple_repeat 1 20 0 1853 180 0 7 chr10 33419732 33420032 -112169256 - AluJo SINE Alu -12 300 3 245 286 31 41 chr10 33420264 33420362 -112168926 + MIR SINE MIR 133 229 -33 364 325 55 6 chr10 33420532 33420695 -112168593 + MIR SINE MIR 69 239 -23 1645 141 0 0 chr10 33420881 33421158 -112168130 + L1PB4 LINE L1 5303 5579 -577 24 32 0 0 chr10 33421218 33421249 -112168039 + AT_rich Low_complexity Low_complexity 1 31 0 2565 186 9 28 chr10 33421280 33421487 -112167801 + L1PB4 LINE L1 5624 5833 -323 2223 109 23 0 chr10 33421487 33421789 -112167499 + AluSc SINE Alu 1 309 0 2565 186 9 28 chr10 33421789 33422120 -112167168 + L1PB4 LINE L1 5833 6152 -4 407 250 89 5 chr10 33424042 33424266 -112165022 + LTR16C LTR ERVL 249 491 0 271 143 191 48 chr10 33424724 33424787 -112164501 - L2 LINE L2 0 3313 3242 2137 173 26 24 chr10 33424964 33425456 -112163832 - L1MA9 LINE L1 -31 6281 5789 1785 98 11 0 chr10 33425487 33425752 -112163536 + L1M2 LINE L1 5479 5746 -566 924 294 150 0 chr10 33425752 33426261 -112163027 - L2 LINE L2 -239 3074 2485 2225 204 51 40 chr10 33426262 33426865 -112162423 - L1MC4 LINE L1 -662 7380 6771 225 296 101 51 chr10 33427440 33427631 -112161657 - MIR SINE MIR -64 144 1 262 238 0 0 chr10 33428802 33428865 -112160423 + Charlie8 DNA MER1_type 2355 2417 0 308 244 47 23 chr10 33431083 33431169 -112158119 + L3 LINE CR1 1434 1521 -56 1927 139 0 20 chr10 33431180 33431481 -112157807 - AluJo SINE Alu -17 295 1 294 206 68 0 chr10 33431517 33431590 -112157698 + MIR SINE MIR 103 180 -82 563 320 87 72 chr10 33433090 33433630 -112155658 + L1MEd LINE L1 2 549 -5570 767 150 8 0 chr10 33433633 33433760 -112155528 + FLAM_C SINE Alu 14 141 -2 400 256 110 42 chr10 33433760 33434191 -112155097 + L1MEd LINE L1 561 1128 -4991 2372 90 0 3 chr10 33434191 33434491 -112154797 + AluSq SINE Alu 1 299 -14 400 256 110 42 chr10 33434491 33434622 -112154666 + L1MEd LINE L1 1128 1249 -4870 282 278 26 26 chr10 33434610 33434761 -112154527 + HAL1 LINE L1 1376 1526 -981 * 887 235 15 15 chr10 33434776 33435036 -112154252 - L1ME3 LINE L1 -192 5970 5711 1935 105 8 0 chr10 33435137 33435403 -112153885 + AluSp SINE Alu 41 308 -5 243 223 155 19 chr10 33436890 33436993 -112152295 - MIR SINE MIR -6 256 140 323 237 111 7 chr10 33436995 33437130 -112152158 - L1ME4a LINE L1 -4 6117 5969 282 242 129 30 chr10 33437168 33437300 -112151988 + L2 LINE L2 3169 3313 0 340 328 39 10 chr10 33437369 33437573 -112151715 - L1ME3 LINE L1 -436 5685 5476 23 0 0 0 chr10 33437608 33437631 -112151657 + AT_rich Low_complexity Low_complexity 1 23 0 324 257 144 81 chr10 33438093 33438315 -112150973 - HAL1 LINE L1 -6 2501 2266 443 276 104 18 chr10 33438864 33439025 -112150263 - L1ME3 LINE L1 -2584 3562 3416 2185 86 0 0 chr10 33439025 33439294 -112149994 - AluSx SINE Alu -16 296 28 443 276 104 18 chr10 33439294 33439458 -112149830 - L1ME3 LINE L1 -2730 3416 3209 2820 260 83 22 chr10 33439466 33439785 -112149503 - L1ME LINE L1 -697 5448 5150 186 103 0 0 chr10 33439785 33439814 -112149474 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 2820 260 83 22 chr10 33439814 33441073 -112148215 - L1ME LINE L1 -995 5150 3780 393 336 152 11 chr10 33441131 33441491 -112147797 - L1ME LINE L1 -4862 1257 821 2238 105 0 0 chr10 33441491 33441787 -112147501 - AluSq SINE Alu -17 296 1 393 336 152 11 chr10 33441787 33441873 -112147415 - L1ME LINE L1 -5298 821 748 215 200 17 17 chr10 33441874 33441934 -112147354 + T-rich Low_complexity Low_complexity 3 62 0 9114 110 2 0 chr10 33441936 33444029 -112145259 - L1PA8A LINE L1 -18 6113 4051 6692 132 18 0 chr10 33444029 33445173 -112144115 + L1PA8A LINE L1 2915 4078 -2068 666 109 10 0 chr10 33445343 33445444 -112143844 - L1MA6 LINE L1 -10 6290 6189 1081 118 6 0 chr10 33445444 33445614 -112143674 + L1MA6 LINE L1 5814 5984 -316 13078 202 65 18 chr10 33445866 33450600 -112138688 + L1MA5 LINE L1 74 5221 -1781 2375 97 0 0 chr10 33450600 33450900 -112138388 + AluSc SINE Alu 1 300 -9 13078 202 65 18 chr10 33450900 33452763 -112136525 + L1MA5 LINE L1 5221 6995 -7 206 206 98 76 chr10 33454185 33454277 -112135011 - MIR SINE MIR -45 217 124 183 211 96 0 chr10 33454335 33454387 -112134901 + MIR SINE MIR 84 140 -122 225 0 0 0 chr10 33455237 33455262 -112134026 + (TC)n Simple_repeat Simple_repeat 1 25 0 * 432 0 0 0 chr10 33455261 33455309 -112133979 + (CA)n Simple_repeat Simple_repeat 1 48 0 617 181 0 0 chr10 33455987 33456114 -112133174 - MER69B DNA AcHobo -2 1224 1098 771 176 0 0 chr10 33456118 33456243 -112133045 + FRAM SINE Alu 22 146 -30 261 0 0 0 chr10 33456245 33456274 -112133014 + (CAA)n Simple_repeat Simple_repeat 2 30 0 1454 204 74 54 chr10 33456274 33456817 -112132471 - MER69B DNA AcHobo -128 1098 478 1131 239 111 17 chr10 33456845 33457142 -112132146 - MER69B DNA AcHobo -901 325 1 2375 83 0 3 chr10 33457983 33458295 -112130993 + AluY SINE Alu 1 311 0 687 181 25 38 chr10 33458307 33458467 -112130821 - L1MB3 LINE L1 -8 6175 6018 3226 146 24 22 chr10 33458478 33459541 -112129747 - L1PA16 LINE L1 -9 6157 4953 2000 189 0 13 chr10 33459540 33459921 -112129367 - L1MB3 LINE L1 -147 6036 5661 * 6001 100 6 1 chr10 33459917 33460766 -112128522 - L1PA13 LINE L1 -1 6162 5310 4128 203 30 10 chr10 33460763 33460959 -112128329 - L1MB3 LINE L1 -509 5674 5484 * 723 100 0 0 chr10 33460959 33461059 -112128229 - L1PA13 LINE L1 -19 6144 6045 4128 203 30 10 chr10 33461059 33462150 -112127138 - L1MB3 LINE L1 -699 5484 4364 * 9421 200 79 27 chr10 33462135 33463011 -112126277 - L1PA4 LINE L1 -663 5492 4663 5233 40 2 0 chr10 33463011 33463636 -112125652 + L1PA4 LINE L1 5519 6150 -5 9421 200 79 27 chr10 33463636 33465577 -112123711 - L1P2 LINE L1 -1492 4663 2526 261 225 85 116 chr10 33465659 33465788 -112123500 + L2 LINE L2 3188 3312 -1 995 301 50 29 chr10 33466135 33467084 -112122204 - L1ME3 LINE L1 -279 5883 4909 1464 290 111 28 chr10 33467145 33468491 -112120797 - L1ME3 LINE L1 -1321 4825 3369 545 228 90 27 chr10 33468532 33468804 -112120484 + L1MA9 LINE L1 5966 6266 -25 327 218 106 94 chr10 33468905 33469095 -112120193 - L1ME3 LINE L1 -2922 3224 3027 2028 97 11 7 chr10 33469095 33469374 -112119914 - AluSg SINE Alu -30 280 1 327 218 106 94 chr10 33469374 33469523 -112119765 - L1ME3 LINE L1 -3119 3027 2881 2361 126 23 0 chr10 33469547 33470011 -112119277 - L1P5 LINE L1 -523 5628 5156 379 262 136 31 chr10 33470081 33470471 -112118817 - L1MEd LINE L1 -865 1625 1096 201 175 0 0 chr10 33470887 33470927 -112118361 + (TA)n Simple_repeat Simple_repeat 1 40 0 563 237 59 0 chr10 33471051 33471186 -112118102 + L2 LINE L2 3168 3310 -3 459 222 0 0 chr10 33471548 33471638 -112117650 + 5S rRNA rRNA 1 90 -31 345 327 56 72 chr10 33471681 33472145 -112117143 + L2 LINE L2 2777 3217 -55 2216 88 13 57 chr10 33472145 33472463 -112116825 - AluSq SINE Alu -9 304 1 345 327 56 72 chr10 33472463 33472515 -112116773 + L2 LINE L2 3217 3268 -4 780 104 16 24 chr10 33472925 33473050 -112116238 - FLAM_C SINE Alu -9 134 11 811 153 16 68 chr10 33476487 33476677 -112112611 + L1MC1 LINE L1 6152 6331 -2 495 300 21 26 chr10 33476808 33476998 -112112290 - MIR SINE MIR -22 240 52 911 221 93 78 chr10 33477023 33477431 -112111857 + MLT1J2 LTR MaLR 14 427 -23 590 216 178 14 chr10 33477634 33477842 -112111446 - L1ME1 LINE L1 -34 6132 5891 411 206 33 0 chr10 33478145 33478237 -112111051 - L1ME1 LINE L1 -271 5895 5801 439 257 136 14 chr10 33478238 33478378 -112110910 + MLT1J LTR MaLR 43 199 -312 488 56 113 0 chr10 33478442 33478513 -112110775 - MADE1 DNA Mariner 0 80 2 201 333 53 35 chr10 33478566 33478680 -112110608 + L2 LINE L2 3194 3309 -4 1695 164 0 17 chr10 33479548 33479835 -112109453 - AluJo SINE Alu -30 282 1 2367 92 0 0 chr10 33481276 33481580 -112107708 - AluSx SINE Alu -8 304 1 1624 176 3 21 chr10 33482042 33482331 -112106957 + AluJo SINE Alu 1 284 -28 311 237 21 32 chr10 33482371 33482464 -112106824 - L1MC4 LINE L1 -1339 6703 6612 319 292 10 0 chr10 33482476 33482572 -112106716 + (CATATA)n Simple_repeat Simple_repeat 2 98 0 2095 121 53 31 chr10 33483630 33483986 -112105302 - THE1B LTR MaLR 0 364 1 622 267 25 8 chr10 33483992 33484220 -112105068 + MIR3 SINE MIR 1 227 -35 448 250 106 8 chr10 33484178 33484310 -112104978 - MIR SINE MIR -5 257 113 * 2032 248 103 57 chr10 33484521 33485627 -112103661 + HAL1 LINE L1 1327 2483 -24 1924 135 3 24 chr10 33485627 33485956 -112103332 + AluSx SINE Alu 1 323 0 1551 176 25 22 chr10 33486915 33487193 -112102095 - AluJo SINE Alu -30 282 4 284 241 155 35 chr10 33487547 33487663 -112101625 - L2 LINE L2 -4 3309 3180 1002 162 50 0 chr10 33488547 33488726 -112100562 - MER5A DNA MER1_type 0 189 2 397 203 152 7 chr10 33488773 33488960 -112100328 + MLT1E1 LTR MaLR 2 263 -391 213 349 83 38 chr10 33489056 33489188 -112100100 - L2 LINE L2 -14 3258 3121 302 352 7 14 chr10 33489394 33489536 -112099752 - L2 LINE L2 -309 2963 2823 2098 148 0 0 chr10 33489733 33490043 -112099245 - AluSx SINE Alu -2 310 1 2287 97 3 0 chr10 33490098 33490396 -112098892 + AluSp SINE Alu 3 301 -12 299 171 0 14 chr10 33491905 33491975 -112097313 + L1ME LINE L1 852 920 -5285 657 284 60 41 chr10 33491996 33492725 -112096563 + L1ME LINE L1 891 1783 -4613 24 32 0 0 chr10 33492725 33492756 -112096532 + AT_rich Low_complexity Low_complexity 1 31 0 768 262 123 53 chr10 33492987 33493503 -112095785 + L1ME LINE L1 2087 2634 -3581 2395 75 0 3 chr10 33493503 33493797 -112095491 - AluY SINE Alu -18 293 1 768 262 123 53 chr10 33493797 33494003 -112095285 + L1ME LINE L1 2634 2824 -3391 556 206 0 78 chr10 33494271 33494412 -112094876 - MER119 DNA MER1_type 0 583 454 472 322 58 0 chr10 33494412 33494533 -112094755 - MER119 DNA MER1_type -449 134 7 347 191 44 0 chr10 33495588 33495656 -112093632 - LTR50 LTR ERVL -4 791 721 1876 184 11 6 chr10 33495662 33496009 -112093279 + MLT1A1 LTR MaLR 1 349 -16 576 138 156 50 chr10 33496007 33496167 -112093121 - LTR50 LTR ERVL -618 177 1 * 24534 30 0 0 chr10 33496259 33499997 -112089291 + L1PA3 LINE L1 2419 6152 -3 557 66 13 0 chr10 33500384 33500460 -112088828 - MADE1 DNA Mariner 0 80 4 506 337 92 26 chr10 33500477 33500892 -112088396 - L2 LINE L2 -743 2571 2130 935 171 27 21 chr10 33501077 33501264 -112088024 + MER5A DNA MER1_type 2 189 0 256 330 28 46 chr10 33501304 33501413 -112087875 - MER5B DNA MER1_type -69 109 3 1729 203 46 3 chr10 33501508 33501857 -112087431 + MLT1A1 LTR MaLR 1 364 -1 2853 226 60 80 chr10 33501900 33502896 -112086392 + L1MCb LINE L1 3 978 -5067 759 280 60 0 chr10 33503081 33503313 -112085975 + MIR SINE MIR 17 262 0 320 275 95 33 chr10 33504117 33504328 -112084960 + L1ME LINE L1 5599 5822 -299 37 62 0 0 chr10 33504328 33504393 -112084895 + AT_rich Low_complexity Low_complexity 1 65 0 7581 26 6 1 chr10 33504676 33505862 -112083426 + L1PA3 LINE L1 4966 6155 0 773 255 16 47 chr10 33506336 33506591 -112082697 - L1ME3A LINE L1 -12 6158 5912 1164 260 50 34 chr10 33506653 33507456 -112081832 - L1ME3A LINE L1 -460 5710 4899 1365 246 117 63 chr10 33507587 33508434 -112080854 - L1ME3A LINE L1 -1444 4702 3810 180 152 0 0 chr10 33508521 33508554 -112080734 + CT-rich Low_complexity Low_complexity 2 34 0 293 314 7 36 chr10 33508554 33508706 -112080582 + (TATATG)n Simple_repeat Simple_repeat 1 147 0 188 200 111 0 chr10 33508695 33508740 -112080548 + L2 LINE L2 3180 3229 -43 * 2732 277 62 29 chr10 33509105 33510099 -112079189 - L2 LINE L2 -379 2935 1909 255 327 58 0 chr10 33510118 33510222 -112079066 - L2 LINE L2 -1669 1645 1536 309 189 35 112 chr10 33510927 33511070 -112078218 - L2 LINE L2 -79 3234 3103 217 242 208 25 chr10 33511473 33511593 -112077695 + MIR SINE MIR 76 217 -45 620 272 13 65 chr10 33512403 33512635 -112076653 + L2 LINE L2 3094 3313 0 5468 140 50 11 chr10 33512975 33514291 -112074997 - L1MA8 LINE L1 -2 6289 4914 354 123 0 0 chr10 33514645 33514702 -112074586 + (TCCC)n Simple_repeat Simple_repeat 1 57 0 255 315 0 0 chr10 33517928 33518001 -112071287 + L1ME LINE L1 5517 5589 -2219 6373 26 0 0 chr10 33518016 33518759 -112070529 - L1PA3 LINE L1 0 6155 5413 6256 31 0 0 chr10 33518759 33519565 -112069723 + L1PA3 LINE L1 4639 5444 -711 257 316 53 16 chr10 33519684 33519874 -112069414 + L1ME LINE L1 5710 5906 -215 1957 145 14 0 chr10 33520362 33520651 -112068637 - AluJb SINE Alu -15 297 5 653 207 7 0 chr10 33520758 33520908 -112068380 - L1MA4 LINE L1 -5 6295 6145 1831 34 9 9 chr10 33521027 33521260 -112068028 - L1PA5 LINE L1 -7 6147 5915 2467 74 6 0 chr10 33521687 33521998 -112067290 + AluSq SINE Alu 1 313 0 2051 128 0 3 chr10 33522535 33522825 -112066463 + AluJb SINE Alu 11 299 -13 1124 160 186 8 chr10 33522932 33523169 -112066119 + L1PA16 LINE L1 5879 6157 -9 349 362 190 29 chr10 33523355 33523719 -112065569 + L2 LINE L2 2826 3256 -16 2094 108 0 4 chr10 33523719 33523997 -112065291 + AluSx SINE Alu 24 300 -12 349 362 190 29 chr10 33523997 33524016 -112065272 + L2 LINE L2 3256 3271 -1 1946 185 28 94 chr10 33524161 33524634 -112064654 + MLT1D LTR MaLR 1 435 -70 1836 154 21 0 chr10 33524634 33524920 -112064368 - AluJb SINE Alu -20 292 1 1946 185 28 94 chr10 33524920 33524987 -112064301 + MLT1D LTR MaLR 435 505 0 779 267 109 26 chr10 33525003 33525351 -112063937 - MLT1J LTR MaLR -10 501 125 1602 201 7 0 chr10 33525373 33525667 -112063621 - AluJo SINE Alu -16 296 1 1409 250 134 16 chr10 33526045 33526493 -112062795 - LTR33 LTR ERVL -2 519 19 318 283 54 11 chr10 33528874 33528966 -112060322 - L2 LINE L2 -4 3309 3214 235 155 96 0 chr10 33529763 33529811 -112059477 - L2 LINE L2 -12 3294 3209 240 213 0 0 chr10 33531090 33531151 -112058137 + G-rich Low_complexity Low_complexity 1 61 0 207 308 25 17 chr10 33531248 33531368 -112057920 + (CGGGG)n Simple_repeat Simple_repeat 2 122 0 39 95 0 0 chr10 33531760 33531876 -112057412 + GC_rich Low_complexity Low_complexity 1 116 0 27 0 0 0 chr10 33532115 33532142 -112057146 + GC_rich Low_complexity Low_complexity 1 27 0 22 0 0 0 chr10 33533220 33533242 -112056046 + AT_rich Low_complexity Low_complexity 1 22 0 202 262 0 16 chr10 33534652 33534713 -112054575 + CT-rich Low_complexity Low_complexity 3 62 0 288 0 0 0 chr10 33535914 33535946 -112053342 + (TG)n Simple_repeat Simple_repeat 2 33 0 21 71 0 0 chr10 33537649 33537691 -112051597 + AT_rich Low_complexity Low_complexity 1 42 0 280 348 128 6 chr10 33538457 33538621 -112050667 - MIR3 SINE MIR -17 191 8 2199 129 0 19 chr10 33539041 33539359 -112049929 - AluSq SINE Alu 0 313 2 491 317 45 45 chr10 33539369 33539969 -112049319 - L1ME1 LINE L1 -284 5882 5285 262 273 8 16 chr10 33540055 33540176 -112049112 - L1ME1 LINE L1 -1052 5094 4975 325 340 156 10 chr10 33540188 33540391 -112048897 + MIR SINE MIR 19 256 -6 23 33 0 0 chr10 33540391 33540421 -112048867 + AT_rich Low_complexity Low_complexity 1 30 0 204 40 0 0 chr10 33540944 33540969 -112048319 + (TG)n Simple_repeat Simple_repeat 1 25 0 3168 189 58 59 chr10 33540975 33542147 -112047141 - L1ME1 LINE L1 -8 6158 4979 2382 84 10 0 chr10 33543027 33543335 -112045953 - AluY SINE Alu 0 311 1 273 374 9 0 chr10 33543343 33543450 -112045838 + MIR3 SINE MIR 50 157 -51 367 364 68 30 chr10 33543596 33543923 -112045365 - L2 LINE L2 -276 3037 2705 24 32 0 0 chr10 33544502 33544533 -112044755 + AT_rich Low_complexity Low_complexity 1 31 0 791 292 153 22 chr10 33545519 33546695 -112042593 + L1MEc LINE L1 2095 3385 -2830 624 150 68 12 chr10 33547051 33547253 -112042035 + Tigger7 DNA MER2_type 3 264 -2223 613 173 0 10 chr10 33547254 33547358 -112041930 + Tigger7 DNA MER2_type 2385 2487 0 1248 270 141 32 chr10 33547366 33548174 -112041114 + L1MEc LINE L1 3832 4727 -1488 276 258 111 93 chr10 33548237 33548516 -112040772 + L1MEc LINE L1 4951 5234 -981 1028 284 76 9 chr10 33548552 33549184 -112040104 + L1MB5 LINE L1 5257 5947 -227 2112 98 13 3 chr10 33549627 33549932 -112039356 - AluSg SINE Alu -2 308 1 838 219 95 19 chr10 33550224 33550434 -112038854 - MIR SINE MIR -32 230 5 2111 98 24 14 chr10 33551437 33551732 -112037556 + AluSg SINE Alu 1 298 -12 1080 322 59 66 chr10 33552518 33553725 -112035563 - L2 LINE L2 -13 3259 2065 218 203 153 0 chr10 33553976 33554035 -112035253 - MIR SINE MIR -28 234 167 376 240 164 0 chr10 33554051 33554155 -112035133 + L2 LINE L2 3191 3311 -2 409 193 92 67 chr10 33554160 33554279 -112035009 - MIR SINE MIR -94 168 47 27 0 0 0 chr10 33555416 33555443 -112033845 + AT_rich Low_complexity Low_complexity 1 27 0 370 286 50 29 chr10 33557875 33558015 -112031273 - MIR3 SINE MIR -8 200 58 728 176 8 0 chr10 33559338 33559457 -112029831 - FLAM_A SINE Alu -12 121 2 262 253 95 86 chr10 33559633 33559654 -112029634 - L1ME LINE L1 -360 5761 5742 24 32 0 0 chr10 33559654 33559685 -112029603 + AT_rich Low_complexity Low_complexity 1 31 0 262 253 95 86 chr10 33559685 33559854 -112029434 - L1ME LINE L1 -379 5742 5539 264 319 26 18 chr10 33559901 33560014 -112029274 + MIR SINE MIR 21 134 -74 2281 114 0 0 chr10 33560231 33560539 -112028749 + AluSx SINE Alu 1 308 -4 5731 156 27 3 chr10 33560762 33562187 -112027101 - L1MA8 LINE L1 -2 6289 4834 21 57 0 0 chr10 33562193 33562228 -112027060 + AT_rich Low_complexity Low_complexity 1 35 0 1502 273 113 9 chr10 33564383 33564922 -112024366 - MLT1G1 LTR MaLR 0 595 1 243 273 125 0 chr10 33565024 33565112 -112024176 + MIR SINE MIR 99 197 -65 570 235 96 32 chr10 33566491 33566678 -112022610 - HsTC2 DNA Tc2 -1076 822 624 333 189 40 0 chr10 33566739 33566813 -112022475 - HsTC2 DNA Tc2 -1599 299 223 194 278 56 56 chr10 33567165 33567237 -112022051 - MIR SINE MIR -112 96 25 441 294 108 94 chr10 33567295 33567966 -112021322 - L2 LINE L2 0 3272 2543 367 312 97 7 chr10 33568770 33568924 -112020364 - Charlie8 DNA MER1_type -2196 221 54 406 297 127 62 chr10 33569688 33570217 -112019071 - MLT1L LTR MaLR -52 563 1 190 354 13 0 chr10 33572198 33572277 -112017011 + MIR SINE MIR 22 101 -161 1623 88 0 0 chr10 33573163 33573368 -112015920 - AluSc SINE Alu -32 277 73 1518 180 47 42 chr10 33573475 33574683 -112014605 - SVA Other Other -518 868 434 548 88 12 0 chr10 33574693 33574773 -112014515 - AluSc SINE Alu -225 84 4 189 297 14 0 chr10 33576661 33576735 -112012553 - MIR SINE MIR -167 95 21 341 250 0 0 chr10 33577332 33577412 -112011876 - L1M1 LINE L1 -3947 3618 3539 22 0 0 0 chr10 33577833 33577855 -112011433 + AT_rich Low_complexity Low_complexity 1 22 0 744 164 0 22 chr10 33578270 33578404 -112010884 - FLAM_C SINE Alu -2 131 1 195 372 122 11 chr10 33578578 33578758 -112010530 + L2 LINE L2 2892 3091 -181 226 284 0 54 chr10 33579272 33579346 -112009942 + MER5A DNA MER1_type 94 163 -26 234 244 0 0 chr10 33579347 33579392 -112009896 + (ATGGTG)n Simple_repeat Simple_repeat 2 46 0 535 259 38 25 chr10 33579405 33579563 -112009725 - MIR SINE MIR -18 244 85 268 214 0 60 chr10 33579903 33579987 -112009301 - L1MC4 LINE L1 -1340 6702 6624 804 149 99 99 chr10 33579989 33580100 -112009188 + MER2 DNA MER2_type 2 116 -229 1787 157 0 7 chr10 33580100 33580402 -112008886 - AluJb SINE Alu 0 304 5 804 149 99 99 chr10 33580402 33580490 -112008798 + MER2 DNA MER2_type 115 202 -143 22 80 0 0 chr10 33580490 33580540 -112008748 + AT_rich Low_complexity Low_complexity 1 50 0 22 35 0 0 chr10 33580660 33580689 -112008599 + AT_rich Low_complexity Low_complexity 1 29 0 5419 167 28 11 chr10 33581039 33582096 -112007192 - L1MA7 LINE L1 -3 6288 5214 602 85 0 0 chr10 33582278 33582360 -112006928 + AluY SINE Alu 1 82 -229 300 274 19 66 chr10 33582699 33582805 -112006483 + MIR SINE MIR 42 142 -66 640 169 8 8 chr10 33582844 33582968 -112006320 - FLAM_C SINE Alu -19 124 1 225 0 0 0 chr10 33585143 33585168 -112004120 + (TG)n Simple_repeat Simple_repeat 2 26 0 21 0 0 0 chr10 33585262 33585283 -112004005 + AT_rich Low_complexity Low_complexity 1 21 0 266 295 53 42 chr10 33586395 33586490 -112002798 - L2 LINE L2 -30 3242 3147 465 19 0 0 chr10 33586993 33587047 -112002241 + (CA)n Simple_repeat Simple_repeat 1 54 0 219 232 196 0 chr10 33587770 33587826 -112001462 + L3 LINE CR1 1356 1422 -155 191 367 0 0 chr10 33588066 33588126 -112001162 - L2 LINE L2 0 3272 3213 780 304 55 0 chr10 33588530 33588747 -112000541 + MIR SINE MIR 12 240 -22 277 136 55 18 chr10 33589960 33590070 -111999218 + (TA)n Simple_repeat Simple_repeat 2 115 0 30 0 0 0 chr10 33590500 33590530 -111998758 + AT_rich Low_complexity Low_complexity 1 30 0 182 79 0 53 chr10 33591362 33591400 -111997888 + (TCTCTG)n Simple_repeat Simple_repeat 6 41 0 216 97 0 0 chr10 33591405 33591436 -111997852 + (TA)n Simple_repeat Simple_repeat 2 32 0 22 35 0 0 chr10 33591473 33591502 -111997786 + AT_rich Low_complexity Low_complexity 1 29 0 546 236 94 112 chr10 33591691 33592318 -111996970 - L1MC5 LINE L1 -49 7912 7297 225 308 120 30 chr10 33592337 33592470 -111996818 - L1MC4 LINE L1 -574 7468 7324 327 307 12 48 chr10 33592500 33592666 -111996622 - L1MC5 LINE L1 -743 7218 7059 320 208 32 80 chr10 33593139 33593264 -111996024 + L1M4 LINE L1 4184 4302 -1844 2145 118 13 0 chr10 33593684 33593990 -111995298 + AluSx SINE Alu 1 310 -2 24 32 0 0 chr10 33595035 33595066 -111994222 + AT_rich Low_complexity Low_complexity 1 31 0 921 205 45 0 chr10 33595142 33595342 -111993946 + MER3 DNA MER1_type 1 209 0 835 249 30 0 chr10 33595559 33595760 -111993528 - MER3 DNA MER1_type -2 207 1 1939 155 0 7 chr10 33595921 33596224 -111993064 - AluSx SINE Alu -5 307 7 225 298 105 18 chr10 33596235 33596349 -111992939 + MER5C DNA MER1_type 1 124 -200 193 255 21 0 chr10 33596483 33596530 -111992758 + MER5C DNA MER1_type 277 324 0 2315 109 0 3 chr10 33597469 33597780 -111991508 - AluSg SINE Alu 0 310 1 25 0 0 0 chr10 33598146 33598171 -111991117 + AT_rich Low_complexity Low_complexity 1 25 0 27 73 0 0 chr10 33598301 33598356 -111990932 + AT_rich Low_complexity Low_complexity 1 55 0 367 246 9 61 chr10 33598454 33598568 -111990720 - L2 LINE L2 -19 3294 3187 21 0 0 0 chr10 33598591 33598612 -111990676 + AT_rich Low_complexity Low_complexity 1 21 0 1241 168 102 0 chr10 33601638 33601912 -111987376 - MER33 DNA MER1_type -22 302 1 710 183 30 71 chr10 33601994 33602191 -111987097 + MER53 DNA DNA 1 189 0 414 0 0 0 chr10 33603186 33603232 -111986056 + (TG)n Simple_repeat Simple_repeat 1 46 0 245 181 24 24 chr10 33604723 33604792 -111984496 + (TA)n Simple_repeat Simple_repeat 2 73 -11 1817 156 0 13 chr10 33604792 33605093 -111984195 - AluJb SINE Alu -15 297 1 245 181 24 24 chr10 33605093 33605106 -111984182 + (TA)n Simple_repeat Simple_repeat 72 84 0 200 209 93 0 chr10 33605950 33605993 -111983295 - L2 LINE L2 -62 3210 3164 919 250 98 40 chr10 33606337 33606713 -111982575 - L1ME3A LINE L1 0 6170 5773 286 323 129 8 chr10 33606746 33606994 -111982294 - L2 LINE L2 -660 2654 2377 1006 92 14 0 chr10 33608958 33609100 -111980188 - AluSg/x SINE Alu 0 309 166 227 108 0 27 chr10 33609110 33609189 -111980099 - L1PA8 LINE L1 0 6172 6123 738 182 29 115 chr10 33609562 33609771 -111979517 + MER58C DNA MER1_type 1 191 -24 23 0 0 0 chr10 33610275 33610298 -111978990 + AT_rich Low_complexity Low_complexity 1 23 0 2625 255 148 42 chr10 33610390 33610946 -111978342 + L2 LINE L2 1602 2098 -1215 2080 122 0 13 chr10 33610946 33611249 -111978039 - AluSx SINE Alu -13 299 1 2625 255 148 42 chr10 33611249 33612238 -111977050 + L2 LINE L2 2098 3313 0 231 152 22 0 chr10 33612601 33612647 -111976641 - L1MD3 LINE L1 -22 7973 7927 22 0 0 0 chr10 33612755 33612777 -111976511 + AT_rich Low_complexity Low_complexity 1 22 0 278 301 38 21 chr10 33612912 33613098 -111976190 - L1ME LINE L1 -302 5819 5631 21 0 0 0 chr10 33613822 33613843 -111975445 + AT_rich Low_complexity Low_complexity 1 21 0 402 21 0 0 chr10 33614046 33614093 -111975195 + (TTG)n Simple_repeat Simple_repeat 2 48 0 394 301 35 18 chr10 33614468 33614581 -111974707 + MIR3 SINE MIR 73 187 -21 437 320 50 58 chr10 33615011 33615247 -111974041 + MIR SINE MIR 7 236 -26 724 219 129 0 chr10 33616866 33617021 -111972267 + MER45A DNA AcHobo 4 178 0 6819 50 8 11 chr10 33617664 33619019 -111970269 - L1PA7 LINE L1 -1 6153 4784 189 0 0 0 chr10 33619038 33619059 -111970229 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 4613 19 0 0 chr10 33619059 33619588 -111969700 - L1PA3 LINE L1 -10 6145 5617 12967 21 0 0 chr10 33619588 33621321 -111967967 + L1PA3 LINE L1 3880 5612 -543 12090 91 14 1 chr10 33621320 33623039 -111966249 - L1PA7 LINE L1 -1344 4802 3062 * 2144 100 11 48 chr10 33623039 33623318 -111965970 + L1P LINE L1 2706 2969 -3177 2672 14 0 3 chr10 33623318 33623612 -111965676 + AluYb8 SINE Alu 15 307 -11 2144 100 11 48 chr10 33623612 33623703 -111965585 + L1P LINE L1 2969 3062 -3084 3199 57 2 0 chr10 33624219 33624621 -111964667 - L1PA5 LINE L1 -3 6151 5749 434 296 78 0 chr10 33626041 33626183 -111963105 + MIR SINE MIR 83 235 -27 231 250 0 0 chr10 33627264 33627312 -111961976 + (CTG)n Simple_repeat Simple_repeat 2 49 0 30 0 0 0 chr10 33627470 33627500 -111961788 + AT_rich Low_complexity Low_complexity 1 30 0 371 370 95 38 chr10 33629745 33630007 -111959281 - L2 LINE L2 -1 3271 2995 1189 139 102 5 chr10 33630757 33630972 -111958316 + MER46A DNA MER2_type 1 236 0 264 232 0 0 chr10 33630998 33631054 -111958234 - L2 LINE L2 -76 3237 3182 348 316 51 63 chr10 33631251 33631488 -111957800 - L2 LINE L2 -462 2852 2619 330 276 126 24 chr10 33631720 33631847 -111957441 - L2 LINE L2 0 3272 3133 2166 189 138 22 chr10 33632149 33632735 -111956553 - MLT1E1 LTR MaLR 0 654 1 301 348 163 0 chr10 33633723 33633858 -111955430 + L2 LINE L2 3116 3272 0 2182 163 11 3 chr10 33634629 33634998 -111954290 - L1PA16 LINE L1 -11 6155 5784 246 105 0 0 chr10 33634998 33635036 -111954252 + (TA)n Simple_repeat Simple_repeat 1 38 0 181 98 49 0 chr10 33635954 33635995 -111953293 + T-rich Low_complexity Low_complexity 4 46 0 244 316 69 46 chr10 33637946 33638120 -111951168 + MIR SINE MIR 7 184 -78 272 315 14 0 chr10 33639143 33639216 -111950072 + MIR SINE MIR 5 78 -184 2448 50 0 23 chr10 33639526 33639828 -111949460 + AluY SINE Alu 1 295 -16 7417 183 28 13 chr10 33639837 33641366 -111947922 - L1PBa LINE L1 -2799 4063 2451 1835 88 78 3 chr10 33641366 33641650 -111947638 + L1PA13 LINE L1 5859 6163 0 7417 183 28 13 chr10 33641650 33641683 -111947605 - L1PBa LINE L1 -4411 2451 2420 2437 84 10 0 chr10 33641689 33641997 -111947291 - AluSq SINE Alu -2 311 1 224 247 111 0 chr10 33642275 33642356 -111946932 - MIR SINE MIR -49 213 124 281 29 0 200 chr10 33643268 33643338 -111945950 - U2 snRNA snRNA -132 56 1 23 33 0 0 chr10 33643475 33643505 -111945783 + AT_rich Low_complexity Low_complexity 1 30 0 646 164 75 25 chr10 33644104 33644263 -111945025 + MER3 DNA MER1_type 1 167 -42 1836 160 0 7 chr10 33644268 33644549 -111944739 + AluJb SINE Alu 6 284 -28 5563 189 99 9 chr10 33644610 33645888 -111943400 - Charlie1a DNA MER1_type -3 1452 61 298 250 54 22 chr10 33646192 33646284 -111943004 - MIR SINE MIR -16 246 152 242 326 92 0 chr10 33646294 33646392 -111942896 + MIR3 SINE MIR 49 155 -53 671 318 181 12 chr10 33646792 33646914 -111942374 - L2 LINE L2 -1 3312 3212 1818 206 101 15 chr10 33646914 33647379 -111941909 + MLT1D LTR MaLR 1 505 0 671 318 181 12 chr10 33647379 33647903 -111941385 - L2 LINE L2 -101 3212 2551 588 276 71 20 chr10 33648416 33648612 -111940676 + MIR SINE MIR 6 211 -51 1500 184 7 31 chr10 33650511 33650805 -111938483 + AluJo SINE Alu 1 287 -25 270 164 0 0 chr10 33650806 33650861 -111938427 + (CATA)n Simple_repeat Simple_repeat 2 56 0 34 55 0 0 chr10 33650957 33651012 -111938276 + AT_rich Low_complexity Low_complexity 1 55 0 587 289 114 0 chr10 33651466 33651694 -111937594 - L2 LINE L2 -43 3270 3017 2188 238 243 23 chr10 33651727 33652247 -111937041 - L2 LINE L2 -417 2897 2493 12196 44 4 10 chr10 33652247 33654532 -111934756 + L1PA5 LINE L1 3874 6154 0 2188 238 243 23 chr10 33654532 33654966 -111934322 - L2 LINE L2 -821 2493 1733 225 258 45 34 chr10 33654966 33655055 -111934233 - L2 LINE L2 -2185 1129 1040 326 254 164 5 chr10 33655090 33655279 -111934009 - L1M4 LINE L1 -743 5403 5185 42689 34 22 1 chr10 33655369 33661394 -111927894 - L1PA2 LINE L1 -1 6154 3 381 288 207 26 chr10 33661396 33661667 -111927621 - L1M4 LINE L1 -1092 5054 4735 730 290 47 20 chr10 33661764 33662019 -111927269 - MIR SINE MIR 0 262 1 382 277 76 63 chr10 33662060 33662587 -111926701 - L1M4 LINE L1 -1533 4613 4080 22 0 0 0 chr10 33662777 33662799 -111926489 + AT_rich Low_complexity Low_complexity 1 22 0 318 132 0 0 chr10 33662830 33662883 -111926405 + (TG)n Simple_repeat Simple_repeat 1 53 0 22 35 0 0 chr10 33664036 33664065 -111925223 + AT_rich Low_complexity Low_complexity 1 29 0 23 54 0 0 chr10 33664190 33664227 -111925061 + AT_rich Low_complexity Low_complexity 1 37 0 183 276 52 17 chr10 33664586 33664644 -111924644 - L2 LINE L2 -4 3309 3250 414 0 0 0 chr10 33664658 33664704 -111924584 + (TG)n Simple_repeat Simple_repeat 1 46 0 306 0 0 0 chr10 33664703 33664737 -111924551 + (GA)n Simple_repeat Simple_repeat 1 34 0 * 14275 86 15 1 chr10 33665594 33668369 -111920919 + L1PA7 LINE L1 3366 6149 -5 459 293 103 17 chr10 33668574 33668748 -111920540 + MIR SINE MIR 10 198 -64 344 265 10 0 chr10 33668760 33668858 -111920430 - MIR SINE MIR -10 252 154 417 20 0 0 chr10 33670273 33670323 -111918965 + (TG)n Simple_repeat Simple_repeat 2 51 0 260 337 133 16 chr10 33670587 33670842 -111918446 + L1MC/D LINE L1 5555 5839 -1969 1569 155 155 25 chr10 33670845 33671168 -111918120 - MER47A DNA MER2_type -1 365 1 432 0 0 0 chr10 33671788 33671836 -111917452 + (TG)n Simple_repeat Simple_repeat 2 49 0 659 224 72 91 chr10 33672539 33672803 -111916485 + MIR SINE MIR 4 262 0 228 264 264 19 chr10 33673674 33673833 -111915455 + MIR3 SINE MIR 5 202 -6 215 209 23 0 chr10 33674213 33674256 -111915032 - MIR3 SINE MIR -31 177 134 21 0 0 0 chr10 33674702 33674723 -111914565 + AT_rich Low_complexity Low_complexity 1 21 0 226 250 94 16 chr10 33674938 33675002 -111914286 - MIR SINE MIR -80 128 60 529 311 137 25 chr10 33675620 33676174 -111913114 + L1MEd LINE L1 461 1076 -5043 1197 84 0 0 chr10 33676174 33676328 -111912960 + AluY SINE Alu 150 303 -8 1582 248 82 52 chr10 33676329 33677560 -111911728 + L1MEd LINE L1 1067 2166 -3965 868 234 5 49 chr10 33677586 33677791 -111911497 - AluJo SINE Alu -30 282 87 4164 217 44 5 chr10 33677806 33678864 -111910424 + L1MEd LINE L1 2188 3287 -2842 726 321 229 19 chr10 33678862 33679652 -111909636 + L1M2 LINE L1 1 956 -5893 * 503 286 70 109 chr10 33679954 33680384 -111908904 + L1PB4 LINE L1 722 1134 -5715 1790 235 91 23 chr10 33680384 33681168 -111908120 + L1PB4 LINE L1 1335 2128 -4720 * 42518 34 22 1 chr10 33681164 33687177 -111902111 + L1PA3 LINE L1 13 6155 0 3570 220 29 4 chr10 33687185 33688052 -111901236 + L1PB4 LINE L1 2110 2995 -3853 * 8617 194 49 17 chr10 33688037 33690991 -111898297 + L1PB4 LINE L1 3811 6858 0 2096 231 31 36 chr10 33691002 33691582 -111897706 + L1 LINE L1 3997 4573 -2275 21 0 0 0 chr10 33691789 33691810 -111897478 + AT_rich Low_complexity Low_complexity 1 21 0 196 338 0 14 chr10 33692443 33692514 -111896774 + MIR3 SINE MIR 101 170 -38 809 201 143 52 chr10 33692697 33693005 -111896283 - L1MC4a LINE L1 -1417 6391 6056 3200 214 45 99 chr10 33693006 33693459 -111895829 + L1MC4a LINE L1 6344 6820 -988 276 190 121 0 chr10 33693459 33693517 -111895771 + AluYb8 SINE Alu 118 182 -126 698 121 0 0 chr10 33693518 33693617 -111895671 + FLAM_A SINE Alu 23 121 -21 3200 214 45 99 chr10 33693617 33694631 -111894657 + L1MC4a LINE L1 6819 7801 -7 586 290 70 9 chr10 33695157 33695371 -111893917 - MIR SINE MIR -16 246 20 1236 193 67 130 chr10 33695721 33696260 -111893028 - MLT1D LTR MaLR 0 505 1 549 304 83 21 chr10 33696303 33696543 -111892745 - MIR SINE MIR -2 260 6 211 332 97 40 chr10 33697176 33697402 -111891886 - MIR SINE MIR -11 251 13 2873 228 102 37 chr10 33697749 33698532 -111890756 - L1MD2 LINE L1 -245 6374 5643 553 65 0 0 chr10 33698532 33698609 -111890679 - L1PA5 LINE L1 0 6154 6078 2873 228 102 37 chr10 33698609 33701734 -111887554 - L1MD2 LINE L1 -976 5643 2083 2241 249 78 34 chr10 33701758 33702919 -111886369 - L1MD2 LINE L1 -4473 1933 775 312 291 86 26 chr10 33703539 33703656 -111885632 - L1MD2 LINE L1 -5879 517 394 224 367 30 35 chr10 33704006 33704127 -111885161 - L2 LINE L2 -219 3053 2932 1788 188 40 3 chr10 33704127 33704478 -111884810 + MER47A DNA MER2_type 2 365 -1 224 367 30 35 chr10 33704478 33704525 -111884763 - L2 LINE L2 -340 2932 2886 2013 164 100 0 chr10 33704868 33705277 -111884011 - L1MD1 LINE L1 0 6242 5793 226 207 73 37 chr10 33706202 33706284 -111883004 - MER41A LTR ERV1 -263 291 207 455 290 210 11 chr10 33707028 33707214 -111882074 + MIR SINE MIR 14 236 -26 917 130 0 25 chr10 33707540 33707702 -111881586 - L1MA4 LINE L1 0 6300 6143 528 45 0 0 chr10 33709867 33709934 -111879354 + (TAGA)n Simple_repeat Simple_repeat 3 69 0 379 229 46 28 chr10 33710431 33710540 -111878748 - MIR SINE MIR -3 259 149 544 247 186 0 chr10 33710558 33710821 -111878467 - Charlie2a DNA MER1_type -48 2814 2503 1686 207 156 38 chr10 33710861 33711528 -111877760 - Charlie2a DNA MER1_type -669 2193 1448 1322 112 0 0 chr10 33711563 33711741 -111877547 + AluSp SINE Alu 122 299 -14 230 178 55 41 chr10 33711775 33711848 -111877440 - Charlie2a DNA MER1_type -1437 1425 1352 1278 247 136 26 chr10 33711960 33712849 -111876439 - Charlie2a DNA MER1_type -1801 1061 1 1408 162 74 29 chr10 33713585 33713894 -111875394 - MER44D DNA MER2_type -7 602 10 206 147 29 0 chr10 33714686 33714720 -111874568 + MIR SINE MIR 197 231 -31 15142 164 58 31 chr10 33715369 33721527 -111867761 - L1MA4A LINE L1 -477 6528 3 416 192 2 110 chr10 33721982 33722136 -111867152 - MLT1J1 LTR MaLR -258 192 54 522 302 98 38 chr10 33722352 33722588 -111866700 + MIR SINE MIR 10 258 -4 21 0 0 0 chr10 33723580 33723601 -111865687 + AT_rich Low_complexity Low_complexity 1 21 0 1840 272 172 13 chr10 33724546 33725506 -111863782 - L2 LINE L2 0 3313 2197 196 346 60 55 chr10 33725828 33726010 -111863278 - L2 LINE L2 -524 2790 2608 192 269 0 45 chr10 33727749 33727816 -111861472 + L3 LINE CR1 595 658 -919 186 296 74 0 chr10 33727984 33728038 -111861250 + L3 LINE CR1 665 722 -855 313 259 223 0 chr10 33728129 33728241 -111861047 + L3 LINE CR1 916 1052 -525 270 0 0 0 chr10 33728502 33728532 -111860756 + (A)n Simple_repeat Simple_repeat 1 30 0 509 218 27 0 chr10 33728842 33728952 -111860336 + MER5C DNA MER1_type 5 117 -207 405 144 10 87 chr10 33728964 33729068 -111860220 + MER5C DNA MER1_type 228 323 -1 929 253 24 20 chr10 33729717 33729966 -111859322 - MIR SINE MIR 0 262 13 790 297 39 4 chr10 33730147 33730403 -111858885 + L3 LINE CR1 1063 1327 -250 298 274 237 7 chr10 33730502 33730637 -111858651 - MIR SINE MIR -48 214 49 405 346 65 7 chr10 33730680 33730833 -111858455 + L3 LINE CR1 1413 1574 -3 318 304 61 17 chr10 33731038 33731153 -111858135 - L2 LINE L2 0 3272 3153 1765 148 32 29 chr10 33736152 33736462 -111852826 - AluJb SINE Alu -1 311 1 188 194 0 0 chr10 33736642 33736678 -111852610 + L3 LINE CR1 974 1009 -568 217 301 0 72 chr10 33736706 33736789 -111852499 + L3 LINE CR1 1325 1401 -176 284 196 54 0 chr10 33736830 33736886 -111852402 + L3 LINE CR1 1516 1574 -3 1191 192 68 59 chr10 33736915 33737253 -111852035 + MER58B DNA MER1_type 1 341 0 704 203 84 45 chr10 33737273 33737475 -111851813 + MER63A DNA MER1_type 1 210 0 626 219 19 109 chr10 33738015 33738271 -111851017 + MER106A DNA MER1_type 1 233 -3 255 291 0 0 chr10 33738951 33739102 -111850186 + GA-rich Low_complexity Low_complexity 1 151 0 369 0 0 0 chr10 33739366 33739407 -111849881 + (CA)n Simple_repeat Simple_repeat 2 42 0 284 314 29 19 chr10 33741496 33741601 -111847687 + L2 LINE L2 3203 3308 -5 220 320 13 13 chr10 33742306 33742384 -111846904 - MIR SINE MIR -161 101 24 1513 188 45 10 chr10 33742384 33742551 -111846737 - AluJo SINE Alu -10 302 119 225 0 0 0 chr10 33742551 33742576 -111846712 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1513 188 45 10 chr10 33742576 33742700 -111846588 - AluJo SINE Alu -193 119 1 7393 215 70 61 chr10 33743013 33744131 -111845157 + L1ME1 LINE L1 2656 3763 -2403 1742 163 40 121 chr10 33744131 33744586 -111844702 - MER47B DNA MER2_type 0 418 1 7393 215 70 61 chr10 33744586 33745991 -111843297 + L1ME1 LINE L1 3763 5155 -1011 2650 151 38 13 chr10 33745991 33746514 -111842774 + L1MB8 LINE L1 5642 6177 -1 7393 215 70 61 chr10 33746514 33746717 -111842571 + L1ME1 LINE L1 5155 5355 -811 2266 101 3 0 chr10 33746717 33747015 -111842273 + AluSg SINE Alu 3 301 -9 7393 215 70 61 chr10 33747015 33747596 -111841692 + L1ME1 LINE L1 5355 6159 -7 1405 169 100 95 chr10 33749831 33750252 -111839036 - L1MB4 LINE L1 0 6180 5758 1028 166 102 15 chr10 33750252 33750457 -111838831 - AluJo SINE Alu -79 233 11 2607 172 37 16 chr10 33750471 33751343 -111837945 - L1MB4 LINE L1 -428 5752 4855 321 184 0 0 chr10 33751350 33751399 -111837889 + 5S rRNA rRNA 2 50 -71 2274 92 27 0 chr10 33751435 33751730 -111837558 - AluSq SINE Alu -10 303 1 300 53 0 0 chr10 33751910 33751948 -111837340 + (TTTTA)n Simple_repeat Simple_repeat 1 38 0 958 57 24 0 chr10 33751948 33752071 -111837217 - L1PA10 LINE L1 -21 6147 6022 476 210 159 46 chr10 33752660 33752855 -111836433 + L2 LINE L2 2231 2447 -867 533 251 153 18 chr10 33753100 33753323 -111835965 + MIR SINE MIR 10 262 0 207 290 210 0 chr10 33753618 33753718 -111835570 + MIR SINE MIR 129 249 -13 3108 107 23 90 chr10 33753876 33754532 -111834756 + MER4B LTR ERV1 1 779 0 468 226 20 0 chr10 33754532 33754634 -111834654 - MIR SINE MIR -4 258 155 3894 162 47 52 chr10 33754706 33755458 -111833830 - MER21B LTR ERV1 -115 748 1 896 206 3 128 chr10 33755478 33755784 -111833504 + MER21B LTR ERV1 41 308 -555 2298 150 60 0 chr10 33756190 33756589 -111832699 + MSTA LTR MaLR 6 428 0 3436 159 43 0 chr10 33756589 33757191 -111832097 + MSTA-int LTR MaLR 1 628 -1023 2154 130 45 17 chr10 33757191 33757545 -111831743 - THE1B LTR MaLR 0 364 1 11523 89 13 4 chr10 33757545 33759111 -111830177 - THE1B-int LTR MaLR 0 1580 1 722 156 57 0 chr10 33759111 33759233 -111830055 - THE1B LTR MaLR 0 364 236 1132 119 40 0 chr10 33759233 33759409 -111829879 - MST-int LTR MaLR -39 1612 1430 1396 112 23 28 chr10 33759410 33759625 -111829663 - THE1B LTR MaLR -150 214 1 5729 163 12 45 chr10 33759627 33760671 -111828617 + MSTA-int LTR MaLR 626 1635 -16 2319 155 41 5 chr10 33760681 33761093 -111828195 + MSTA LTR MaLR 1 427 -1 319 214 14 14 chr10 33761116 33761186 -111828102 + LTR16B LTR ERVL 395 464 0 184 219 24 0 chr10 33761361 33761402 -111827886 + L2 LINE L2 3272 3313 0 412 254 17 8 chr10 33761511 33761629 -111827659 + MER103 DNA DNA 1 119 -47 2183 103 24 0 chr10 33762242 33762534 -111826754 - AluSx SINE Alu -13 299 1 31 0 0 0 chr10 33762918 33762949 -111826339 + AT_rich Low_complexity Low_complexity 1 31 0 2466 148 58 22 chr10 33763145 33763517 -111825771 + MSTB LTR MaLR 1 391 -35 2303 137 73 14 chr10 33763517 33763861 -111825427 - THE1B LTR MaLR 0 364 1 2466 148 58 22 chr10 33763861 33763899 -111825389 + MSTB LTR MaLR 391 426 0 2197 84 7 37 chr10 33764629 33764927 -111824361 - AluY SINE Alu -22 289 1 2074 136 0 13 chr10 33764955 33765265 -111824023 + AluSx SINE Alu 1 306 -6 306 328 77 16 chr10 33765473 33765656 -111823632 + L1M4 LINE L1 3377 3570 -2576 585 295 63 59 chr10 33765688 33766193 -111823095 + L1M4 LINE L1 3732 4238 -1908 * 9153 165 95 15 chr10 33766186 33766996 -111822292 + L1MCa LINE L1 3 747 -5679 2083 114 11 0 chr10 33766996 33767276 -111822012 + AluSx SINE Alu 6 288 -24 228 35 0 0 chr10 33767279 33767308 -111821980 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 9153 165 95 15 chr10 33767308 33768337 -111820951 + L1MCa LINE L1 748 1994 -4432 3135 264 12 21 chr10 33768338 33769092 -111820196 + L1M3b LINE L1 11 757 -5524 4678 229 34 44 chr10 33769142 33771045 -111818243 + L1M3b LINE L1 647 2160 -4190 1976 113 88 0 chr10 33771045 33771328 -111817960 + AluSx SINE Alu 1 308 -4 4678 229 34 44 chr10 33771328 33772612 -111816676 + L1M3b LINE L1 2160 3455 -2895 285 136 0 0 chr10 33772603 33772647 -111816641 + L1MA7 LINE L1 5555 5598 -693 * 292 276 76 19 chr10 33772663 33772768 -111816520 - L2 LINE L2 -1262 2052 1942 270 259 0 0 chr10 33772768 33772822 -111816466 - L2 LINE L2 -7 3265 3212 3018 184 64 14 chr10 33772852 33773495 -111815793 + L1MA7 LINE L1 5617 6291 0 404 265 59 54 chr10 33773490 33773863 -111815425 + L1MC1 LINE L1 1129 1503 -4913 * 1761 149 32 36 chr10 33773878 33774186 -111815102 + AluJo SINE Alu 1 307 -5 276 358 88 10 chr10 33774193 33774397 -111814891 - L2 LINE L2 -1153 2161 1942 279 323 200 8 chr10 33774397 33774527 -111814761 - L2 LINE L2 -7 3265 3111 31003 94 8 28 chr10 33774746 33780410 -111808878 - L1PA7 LINE L1 -4 6465 902 11497 205 42 26 chr10 33780757 33781410 -111807878 + L1MC1 LINE L1 1985 2626 -3987 2071 108 0 7 chr10 33781410 33781696 -111807592 + AluSg SINE Alu 1 284 -26 11497 205 42 26 chr10 33781696 33782156 -111807132 + L1MC1 LINE L1 2626 3077 -3536 1505 196 7 21 chr10 33782156 33782442 -111806846 + AluJo SINE Alu 1 282 -30 11497 205 42 26 chr10 33782442 33785828 -111803460 + L1MC1 LINE L1 3077 6588 -25 419 285 96 16 chr10 33785882 33786205 -111803083 + L1M4 LINE L1 4259 4607 -1539 1734 177 87 9 chr10 33786350 33786714 -111802574 - MER82 DNA MER2_type -28 625 203 6136 142 49 3 chr10 33787260 33788231 -111801057 + Tigger1 DNA MER2_type 2 1017 -1401 327 155 309 0 chr10 33788244 33788341 -111800947 + L1ME1 LINE L1 5838 5964 -202 203 156 0 0 chr10 33788341 33788373 -111800915 + (CA)n Simple_repeat Simple_repeat 1 32 0 738 34 0 0 chr10 33788596 33788685 -111800603 + (GAAA)n Simple_repeat Simple_repeat 2 90 0 243 0 0 0 chr10 33788685 33788712 -111800576 + (GGGA)n Simple_repeat Simple_repeat 1 27 0 985 99 12 12 chr10 33788712 33788873 -111800415 + (GAAA)n Simple_repeat Simple_repeat 4 164 0 1747 175 72 52 chr10 33789096 33789484 -111799804 + MSTD LTR MaLR 1 396 0 180 371 0 0 chr10 33791494 33791564 -111797724 + MIR3 SINE MIR 85 154 -54 2380 106 53 34 chr10 33792289 33792646 -111796642 + THE1B LTR MaLR 1 364 0 1343 153 6 128 chr10 33792934 33793261 -111796027 - AluJo SINE Alu -25 287 1 2495 64 0 3 chr10 33793270 33793566 -111795722 - AluSp SINE Alu -18 295 1 1574 181 23 0 chr10 33793589 33793848 -111795440 - AluJo SINE Alu -37 275 11 316 304 54 9 chr10 33795078 33795190 -111794098 - L2 LINE L2 -3 3269 3153 2244 101 14 3 chr10 33797608 33797905 -111791383 - AluSp SINE Alu -13 300 1 652 292 130 24 chr10 33798159 33798529 -111790759 + MLT1J LTR MaLR 103 511 0 5873 90 11 60 chr10 33798900 33799768 -111789520 - LTR12 LTR ERV1 0 826 1 2209 105 0 0 chr10 33800595 33800880 -111788408 - AluSc SINE Alu -21 288 4 2078 120 0 29 chr10 33801279 33801588 -111787700 + AluSx SINE Alu 1 300 -12 2371 164 31 14 chr10 33801872 33802292 -111786996 - L1MB3 LINE L1 -298 6383 5957 1971 218 62 28 chr10 33802290 33802825 -111786463 - L1MB3 LINE L1 -2586 4058 3494 * 2187 141 0 0 chr10 33802825 33803123 -111786165 + AluSx SINE Alu 1 298 -14 1971 218 62 28 chr10 33803123 33803260 -111786028 - L1MB3 LINE L1 -3150 3494 3363 293 279 68 20 chr10 33803264 33803411 -111785877 + L1MA9 LINE L1 6083 6236 -76 2984 205 18 28 chr10 33803412 33804152 -111785136 - L1MB3 LINE L1 -4951 1695 964 240 163 0 0 chr10 33804224 33804267 -111785021 + CT-rich Low_complexity Low_complexity 1 43 0 391 267 37 7 chr10 33804314 33804449 -111784839 - L1MB3 LINE L1 -5587 955 817 264 257 14 14 chr10 33804497 33804567 -111784721 - L1M3d LINE L1 -5117 1448 1379 * 371 324 14 7 chr10 33804564 33804706 -111784582 - L1M3d LINE L1 -5700 946 804 243 263 58 100 chr10 33805008 33805267 -111784021 - L1M3d LINE L1 -6293 249 2 283 263 0 0 chr10 33805359 33805416 -111783872 - L2 LINE L2 -8 3305 3249 215 250 0 0 chr10 33805464 33805516 -111783772 - L2 LINE L2 0 3313 3262 576 322 116 27 chr10 33805815 33806414 -111782874 - L2 LINE L2 -208 3064 2403 1075 243 59 50 chr10 33806483 33806824 -111782464 + LTR16A1 LTR ERVL 114 457 0 1313 200 71 32 chr10 33807015 33807284 -111782004 + AluJo SINE Alu 2 284 -18 723 104 0 0 chr10 33807284 33807390 -111781898 + (GGGGA)n Simple_repeat Simple_repeat 3 108 0 1462 317 112 16 chr10 33807566 33808891 -111780397 + HERV16 LTR ERVL 579 2120 -3017 1392 216 5 81 chr10 33808914 33809307 -111779981 - MLT2B1 LTR ERVL -157 363 1 208 191 43 21 chr10 33809307 33809354 -111779934 - MIR SINE MIR -173 89 42 * 307 333 144 35 chr10 33809350 33809869 -111779419 - L2 LINE L2 -1018 2296 1721 182 289 0 0 chr10 33810121 33810166 -111779122 - L2 LINE L2 -844 2470 2426 1713 125 0 142 chr10 33810324 33810661 -111778627 + AluJo SINE Alu 1 289 -13 2274 168 58 5 chr10 33810824 33811222 -111778066 + MSTB LTR MaLR 8 426 0 318 258 180 16 chr10 33811228 33811356 -111777932 - MIR SINE MIR -112 150 2 362 309 30 12 chr10 33811392 33811557 -111777731 - L2 LINE L2 -1232 2082 1915 183 382 0 10 chr10 33812007 33812109 -111777179 - L2 LINE L2 -1177 2137 2037 828 233 33 0 chr10 33812195 33812345 -111776943 - FRAM SINE Alu -11 155 1 1880 97 0 8 chr10 33812398 33812645 -111776643 - AluSx SINE Alu -15 297 53 249 271 227 30 chr10 33813608 33813811 -111775477 + L1ME LINE L1 5582 5824 -297 2345 81 40 0 chr10 33813816 33814114 -111775174 + AluSp SINE Alu 1 310 -3 366 195 53 80 chr10 33814156 33814306 -111774982 + HAL1b LINE L1 1193 1308 -40 184 360 47 12 chr10 33816676 33816762 -111772526 - L2 LINE L2 -15 3257 3169 272 48 24 0 chr10 33818466 33818508 -111770780 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 195 292 105 48 chr10 33818781 33818990 -111770298 + L2 LINE L2 1796 2016 -1298 2280 96 0 7 chr10 33819745 33820038 -111769250 - AluSg SINE Alu -19 291 1 237 108 0 0 chr10 33820210 33820247 -111769041 + (GA)n Simple_repeat Simple_repeat 2 38 0 22 35 0 0 chr10 33820349 33820378 -111768910 + AT_rich Low_complexity Low_complexity 1 29 0 6719 101 31 18 chr10 33820463 33821642 -111767646 - L1MA4A LINE L1 -3 6300 5105 221 278 0 0 chr10 33822311 33822365 -111766923 + L3 LINE CR1 1509 1562 -15 206 373 36 0 chr10 33822466 33822576 -111766712 - L3b LINE CR1 -140 1443 1330 1521 151 0 0 chr10 33822632 33822871 -111766417 - Tigger5 DNA MER2_type 0 2323 2085 1255 169 14 24 chr10 33822861 33823074 -111766214 - Tigger5 DNA MER2_type -2085 238 28 * 221 116 0 23 chr10 33823849 33823892 -111765396 + (GGAA)n Simple_repeat Simple_repeat 1 42 0 194 287 183 9 chr10 33825094 33825209 -111764079 - MIR SINE MIR -19 243 109 228 67 0 0 chr10 33825259 33825289 -111763999 + (CTG)n Simple_repeat Simple_repeat 1 30 0 192 179 0 0 chr10 33825493 33825532 -111763756 + CT-rich Low_complexity Low_complexity 1 39 0 219 174 43 0 chr10 33825610 33825656 -111763632 - L2 LINE L2 -88 3184 3137 810 178 70 76 chr10 33825823 33826008 -111763280 + MER20 DNA MER1_type 36 219 0 278 316 26 0 chr10 33826219 33826333 -111762955 + MIR SINE MIR 30 146 -62 280 153 77 135 chr10 33826463 33826633 -111762655 - L1ME4a LINE L1 -11 6110 5951 3330 143 151 22 chr10 33826930 33827614 -111761674 - LTR48 LTR ERV1 0 787 16 744 149 65 39 chr10 33827683 33827837 -111761451 - LTR48 LTR ERV1 -31 756 599 633 241 76 2 chr10 33827922 33828082 -111761206 + L1PA16 LINE L1 5997 6163 -2 211 253 12 36 chr10 33828999 33829082 -111760206 + GA-rich Low_complexity Low_complexity 3 83 0 324 0 0 0 chr10 33829655 33829691 -111759597 + (TG)n Simple_repeat Simple_repeat 2 37 0 879 235 15 0 chr10 33831929 33832133 -111757155 - MIR SINE MIR -41 221 15 186 304 7 51 chr10 33832764 33832902 -111756386 + L2 LINE L2 2673 2804 -510 2140 156 51 13 chr10 33833677 33834109 -111755179 + MER61C LTR ERV1 1 433 -1 235 246 27 48 chr10 33834267 33834317 -111754971 + MIR SINE MIR 114 164 -98 1941 119 0 0 chr10 33834317 33834586 -111754702 + AluSx SINE Alu 38 306 -6 235 246 27 48 chr10 33834586 33834651 -111754637 + MIR SINE MIR 164 225 -37 283 265 113 13 chr10 33834805 33834956 -111754332 + L1ME4a LINE L1 5909 6074 -47 280 265 0 15 chr10 33836025 33836093 -111753195 - MLT1L LTR MaLR -221 394 328 * 404 287 77 20 chr10 33836079 33836274 -111753014 - MLT1L LTR MaLR -394 221 16 584 287 113 27 chr10 33836315 33836643 -111752645 + HAL1 LINE L1 1515 1870 -637 286 295 30 42 chr10 33837094 33837260 -111752028 + HAL1b LINE L1 743 906 -442 2345 220 72 78 chr10 33837351 33837866 -111751422 + L1MC5 LINE L1 6693 7201 -760 2544 167 6 41 chr10 33837866 33838358 -111750930 - L1PB4 LINE L1 -2 6154 5680 2345 220 72 78 chr10 33838358 33838846 -111750442 + L1MC5 LINE L1 7201 7690 -271 2381 87 0 3 chr10 33838897 33839197 -111750091 - AluSp SINE Alu -14 299 1 804 220 37 18 chr10 33840514 33840732 -111748556 + L1MC5 LINE L1 7705 7926 -35 2140 126 36 8 chr10 33841071 33841429 -111747859 - L1MB4 LINE L1 0 6180 5813 5422 175 9 9 chr10 33841430 33842644 -111746644 - L1MB3 LINE L1 -8 6158 4941 262 293 204 7 chr10 33843478 33843625 -111745663 - MIR SINE MIR -71 191 16 2090 124 58 28 chr10 33843948 33844312 -111744976 - THE1C LTR MaLR 0 375 1 1261 171 82 4 chr10 33844314 33844559 -111744729 - MER74A LTR ERVL -294 264 1 319 277 61 40 chr10 33844591 33844739 -111744549 - MIR SINE MIR -71 191 41 15330 130 24 7 chr10 33845415 33847791 -111741497 + Tigger1 DNA MER2_type 1 2417 -1 210 351 0 21 chr10 33848129 33848223 -111741065 - MIR3 SINE MIR -27 181 90 252 188 0 0 chr10 33848269 33848333 -111740955 + (CA)n Simple_repeat Simple_repeat 1 64 0 1078 189 98 80 chr10 33848390 33848676 -111740612 - MLT2B1 LTR ERVL 0 520 230 418 279 130 43 chr10 33848802 33849171 -111740117 - L1MB3 LINE L1 -1603 4526 4126 238 252 52 43 chr10 33849225 33849340 -111739948 - L1MB3 LINE L1 -3700 2429 2314 3791 249 61 30 chr10 33849560 33851132 -111738156 + L1MEc LINE L1 1658 3280 -2935 2471 83 0 0 chr10 33851132 33851432 -111737856 + AluSg SINE Alu 1 300 -10 3791 249 61 30 chr10 33851432 33851828 -111737460 + L1MEc LINE L1 3280 3662 -2553 550 246 18 13 chr10 33851824 33852005 -111737283 + L1MEc LINE L1 4051 4233 -1982 * 1580 277 114 59 chr10 33852314 33853666 -111735622 - L1MB3 LINE L1 -4816 1315 2 975 312 171 26 chr10 33854132 33855423 -111733865 - L2 LINE L2 0 3313 1836 355 200 14 136 chr10 33857084 33857224 -111732064 + L1ME4a LINE L1 5935 6057 -64 2214 110 20 0 chr10 33857253 33857554 -111731734 - AluSx SINE Alu -5 307 1 1733 134 0 4 chr10 33858098 33858352 -111730936 - AluSg SINE Alu -7 303 51 448 243 88 33 chr10 33858465 33858646 -111730642 - MIR SINE MIR -54 208 18 270 0 0 0 chr10 33858842 33858872 -111730416 + (CA)n Simple_repeat Simple_repeat 2 31 0 674 227 68 68 chr10 33860140 33860338 -111728950 + L1ME1 LINE L1 5891 6091 -75 2115 108 49 0 chr10 33860338 33860626 -111728662 + AluSx SINE Alu 3 304 -8 674 227 68 68 chr10 33860626 33860678 -111728610 + L1ME1 LINE L1 6090 6141 -25 1997 128 3 19 chr10 33861829 33862180 -111727108 - MER4A LTR ERV1 0 664 261 646 103 21 10 chr10 33862180 33862277 -111727011 - MER4A LTR ERV1 -566 98 1 193 179 26 0 chr10 33862315 33862354 -111726934 - L3 LINE CR1 -2 1575 1536 465 253 59 102 chr10 33862972 33863105 -111726183 - MER102a DNA MER1_type -1089 328 191 2242 161 43 5 chr10 33863105 33863521 -111725767 + MSTB1 LTR MaLR 1 432 0 465 253 59 102 chr10 33863521 33863657 -111725631 - MER102a DNA MER1_type -1226 191 71 2195 141 0 0 chr10 33863657 33863969 -111725319 - AluSx SINE Alu 0 312 1 465 253 59 102 chr10 33863969 33864003 -111725285 - MER102a DNA MER1_type -1346 71 37 384 308 158 21 chr10 33864048 33864383 -111724905 - L3 LINE CR1 -106 1471 1091 1080 199 41 8 chr10 33864393 33864701 -111724587 - MLT1A1 LTR MaLR 0 365 8 436 294 100 89 chr10 33864713 33865073 -111724215 - L3 LINE CR1 -514 1063 700 423 282 24 0 chr10 33865499 33865623 -111723665 + L1ME LINE L1 7 133 -5937 853 262 119 107 chr10 33865763 33866175 -111723113 - LTR16A LTR ERVL -33 417 1 222 214 11 34 chr10 33866248 33866337 -111722951 + (TA)n Simple_repeat Simple_repeat 2 88 0 1190 186 5 0 chr10 33866379 33866572 -111722716 - MSTA LTR MaLR -234 194 1 252 0 0 0 chr10 33866605 33866633 -111722655 + (CA)n Simple_repeat Simple_repeat 2 29 0 2788 96 73 0 chr10 33866678 33867075 -111722213 + MSTA LTR MaLR 1 426 -2 2236 183 38 62 chr10 33867294 33867793 -111721495 - MLT2B1 LTR ERVL -25 464 1 1734 173 3 10 chr10 33867881 33868182 -111721106 + AluJb SINE Alu 1 299 -13 331 284 89 64 chr10 33868349 33868913 -111720375 + L1ME LINE L1 560 1156 -4914 240 254 107 107 chr10 33869027 33869232 -111720056 - MIR SINE MIR -50 212 8 231 239 262 0 chr10 33870509 33870593 -111718695 + MIR SINE MIR 44 149 -62 1572 171 68 54 chr10 33870716 33871085 -111718203 - MLT1A2 LTR MaLR 0 374 1 353 214 69 92 chr10 33871491 33871622 -111717666 + MIR SINE MIR 126 253 -9 1280 257 29 11 chr10 33871935 33872363 -111716925 - MLT1H1 LTR MaLR -61 481 1 260 356 68 6 chr10 33872478 33872641 -111716647 + L2 LINE L2 3141 3313 0 313 374 61 0 chr10 33872680 33872795 -111716493 + L2 LINE L2 3142 3263 -9 249 108 0 0 chr10 33873184 33873221 -111716067 + (CA)n Simple_repeat Simple_repeat 2 38 0 332 103 0 29 chr10 33875674 33875742 -111713546 + (CAGAGA)n Simple_repeat Simple_repeat 2 67 0 389 150 14 186 chr10 33875927 33876067 -111713221 - MIR SINE MIR -24 238 123 3197 159 43 19 chr10 33876556 33877240 -111712048 + Tigger7 DNA MER2_type 1 2487 0 5970 226 94 17 chr10 33878269 33880419 -111708869 + L1M4 LINE L1 2 2448 -4377 639 203 69 57 chr10 33880711 33880957 -111708331 - MER112 DNA MER1_type -6 254 6 1156 271 121 27 chr10 33881141 33881891 -111707397 + L2 LINE L2 2489 3311 -2 306 341 32 23 chr10 33882282 33882499 -111706789 - MARNA DNA Mariner -151 435 217 267 257 14 14 chr10 33883135 33883205 -111706083 + L1MDa LINE L1 35 104 -6436 317 252 44 46 chr10 33883219 33883332 -111705956 - L1MC4 LINE L1 -1337 6705 6613 1390 198 52 22 chr10 33883439 33883763 -111705525 - Ricksha DNA DNA -1528 518 185 * 3664 139 16 23 chr10 33883614 33884231 -111705057 - HERV16 LTR ERVL -7 5757 5145 10060 50 3 0 chr10 33884246 33886248 -111703040 - L1PA5 LINE L1 0 6154 4148 1165 75 6 0 chr10 33886255 33886414 -111702874 - L1PA5 LINE L1 -3304 2842 2683 * 18660 56 1 3 chr10 33886413 33888770 -111700518 - L1P LINE L1 -1999 4147 1796 1460 180 123 45 chr10 33888770 33889130 -111700158 - MER4E LTR ERV1 -409 494 1 349 392 46 11 chr10 33889224 33889487 -111699801 - HERV16 LTR ERVL -3419 1577 1306 762 325 38 30 chr10 33889517 33890022 -111699266 - HERV16 LTR ERVL -3779 1217 709 253 200 0 0 chr10 33890622 33890667 -111698621 - LTR16C LTR ERVL -12 479 435 2296 86 3 0 chr10 33890668 33890971 -111698317 + AluSp SINE Alu 1 304 -9 595 253 114 15 chr10 33891027 33891229 -111698059 - LTR16C LTR ERVL -59 432 211 396 151 41 0 chr10 33891283 33891356 -111697932 - AluSc SINE Alu -5 294 219 1631 180 14 7 chr10 33892469 33892763 -111696525 - AluJb SINE Alu -16 296 1 696 171 158 7 chr10 33892857 33893009 -111696279 - MER45A DNA AcHobo 0 178 4 350 295 23 8 chr10 33893026 33893155 -111696133 + MIR3 SINE MIR 11 141 -67 508 258 44 22 chr10 33893480 33893662 -111695626 + MARNA DNA Mariner 167 352 -234 404 321 38 19 chr10 33893782 33893991 -111695297 + MARNA DNA Mariner 358 570 -16 2118 109 3 0 chr10 33894033 33894326 -111694962 + AluSp SINE Alu 1 294 -19 2083 118 0 3 chr10 33896395 33896700 -111692588 + AluSx SINE Alu 1 304 -8 398 199 67 0 chr10 33896936 33897042 -111692246 - L1MB4 LINE L1 -279 5889 5759 828 152 132 39 chr10 33897042 33897246 -111692042 - AluJo SINE Alu -79 233 11 2638 177 36 16 chr10 33897248 33898132 -111691156 - L1MB4 LINE L1 -419 5764 4855 326 211 0 0 chr10 33898139 33898191 -111691097 + 5S rRNA rRNA 2 53 -68 2380 86 0 0 chr10 33898224 33898526 -111690762 - AluSx SINE Alu -10 302 1 4645 242 36 37 chr10 33898526 33900429 -111688859 - L1M1 LINE L1 -4137 2213 647 3115 271 12 19 chr10 33900487 33901233 -111688055 - L1M1 LINE L1 -5530 751 11 8869 165 96 18 chr10 33901234 33902269 -111687019 - L1MCa LINE L1 -4432 1994 1042 1979 117 11 0 chr10 33902269 33902575 -111686713 - AluSx SINE Alu 0 314 6 8869 165 96 18 chr10 33902575 33903385 -111685903 - L1MCa LINE L1 -5384 1042 3 24 0 0 0 chr10 33904199 33904223 -111685065 + AT_rich Low_complexity Low_complexity 1 24 0 770 165 8 0 chr10 33904223 33904350 -111684938 - FLAM_A SINE Alu -4 129 2 1061 65 7 0 chr10 33904647 33904785 -111684503 - L1MA3 LINE L1 -3 6302 6164 553 250 79 18 chr10 33906145 33906348 -111682940 - MIR SINE MIR -48 214 1 181 281 35 0 chr10 33906403 33906460 -111682828 - MIR SINE MIR -150 112 54 344 319 106 6 chr10 33906631 33906791 -111682497 + L2 LINE L2 2494 2669 -645 697 308 112 39 chr10 33906831 33906998 -111682290 + L2 LINE L2 2815 2968 -345 550 141 11 0 chr10 33906998 33907090 -111682198 + HY4 scRNA scRNA 1 93 0 697 308 112 39 chr10 33907090 33907387 -111681901 + L2 LINE L2 2968 3313 0 260 264 222 21 chr10 33908058 33908202 -111681086 + MIR SINE MIR 28 200 -62 414 306 65 48 chr10 33908307 33908493 -111680795 + MIR3 SINE MIR 20 208 0 1705 97 0 0 chr10 33908564 33908790 -111680498 + AluSg/x SINE Alu 82 307 -5 255 250 50 86 chr10 33908913 33909028 -111680260 + MER5B DNA MER1_type 1 124 -65 1521 179 17 10 chr10 33909028 33909325 -111679963 - AluJo SINE Alu -13 299 1 255 250 50 86 chr10 33909325 33909359 -111679929 + MER5B DNA MER1_type 124 158 -31 1915 168 18 0 chr10 33909669 33909996 -111679292 - MLT1B LTR MaLR -57 333 1 303 28 0 0 chr10 33911059 33911095 -111678193 + (TG)n Simple_repeat Simple_repeat 1 36 0 1577 157 9 63 chr10 33911927 33912246 -111677042 - AluJo SINE Alu -7 305 4 2312 83 0 3 chr10 33914193 33914495 -111674793 - AluSq SINE Alu -12 301 1 237 310 34 96 chr10 33914758 33914824 -111674464 - L3 LINE CR1 -418 1159 1090 2134 89 38 0 chr10 33914824 33915116 -111674172 + AluSp SINE Alu 1 303 -10 237 310 34 96 chr10 33915116 33915372 -111673916 - L3 LINE CR1 -487 1090 857 869 265 17 21 chr10 33915405 33915696 -111673592 - L1ME3A LINE L1 -5 6165 5876 342 0 0 0 chr10 33915967 33916005 -111673283 + (TG)n Simple_repeat Simple_repeat 2 39 0 226 161 71 0 chr10 33916341 33916453 -111672835 + (TA)n Simple_repeat Simple_repeat 1 120 0 1829 148 0 7 chr10 33917530 33917821 -111671467 - AluJo SINE Alu -23 289 1 1110 275 99 23 chr10 33917822 33918215 -111671073 - LTR33 LTR ERVL -55 466 44 1765 151 0 35 chr10 33918881 33919192 -111670096 + AluJb SINE Alu 6 305 -7 598 284 77 42 chr10 33919197 33919439 -111669849 - ERVL LTR ERVL -1206 4558 4303 2442 169 20 2 chr10 33919439 33919847 -111669441 + MER47B DNA MER2_type 1 415 -3 598 284 77 42 chr10 33919847 33919889 -111669399 - ERVL LTR ERVL -1461 4303 4264 950 269 18 4 chr10 33919981 33920256 -111669032 - ERVL LTR ERVL -1719 4045 3767 1722 206 48 25 chr10 33920453 33920846 -111668442 - MLT2D LTR ERVL -12 402 1 436 328 103 48 chr10 33920870 33921096 -111668192 - ERVL LTR ERVL -2307 3457 3204 2021 150 127 18 chr10 33921096 33921482 -111667806 - MSTA LTR MaLR 0 428 1 436 328 103 48 chr10 33921482 33921606 -111667682 - ERVL LTR ERVL -2560 3204 3088 1790 298 56 36 chr10 33921728 33922669 -111666619 - ERVL LTR ERVL -2111 2885 1906 1095 344 99 29 chr10 33922667 33923677 -111665611 - ERVL LTR ERVL -3823 1941 861 * 1296 131 10 10 chr10 33923738 33923937 -111665351 + MER4B LTR ERV1 1 199 -411 1982 122 3 52 chr10 33923984 33924313 -111664975 + MER4E LTR ERV1 466 778 -1 1118 284 108 33 chr10 33924792 33925275 -111664013 - LTR33 LTR ERVL -2 519 1 2082 147 75 15 chr10 33925527 33925860 -111663428 + THE1B LTR MaLR 1 353 -11 11830 84 5 0 chr10 33925864 33927354 -111661934 + THE1B-int LTR MaLR 84 1580 0 2303 116 73 14 chr10 33927354 33927698 -111661590 + THE1B LTR MaLR 1 364 0 4212 89 11 101 chr10 33928766 33929496 -111659792 - MER4A LTR ERV1 0 664 1 861 321 42 75 chr10 33929988 33930489 -111658799 - L2 LINE L2 -448 2866 2395 2609 139 25 28 chr10 33930489 33930675 -111658613 + MSTB1 LTR MaLR 2 187 -245 225 0 0 0 chr10 33930675 33930700 -111658588 + (CA)n Simple_repeat Simple_repeat 2 26 0 2609 139 25 28 chr10 33930700 33930945 -111658343 + MSTB1 LTR MaLR 187 432 0 861 321 42 75 chr10 33930945 33931176 -111658112 - L2 LINE L2 -919 2395 2158 203 356 97 33 chr10 33931176 33931536 -111657752 + L2 LINE L2 2844 3226 -46 180 277 62 0 chr10 33931527 33931592 -111657696 + L2 LINE L2 2914 2982 -290 * 246 287 30 20 chr10 33931651 33931752 -111657536 - L2 LINE L2 -494 2820 2719 217 243 14 57 chr10 33931943 33932013 -111657275 - L2 LINE L2 -825 2489 2423 331 273 114 36 chr10 33932375 33932708 -111656580 + L1MC4 LINE L1 7682 8040 -2 348 346 13 26 chr10 33932810 33932963 -111656325 + MER5A DNA MER1_type 7 157 -32 319 227 9 91 chr10 33933026 33933136 -111656152 + MIR SINE MIR 66 166 -96 1054 150 0 99 chr10 33933163 33933396 -111655892 - AluJo SINE Alu -13 299 90 212 278 183 0 chr10 33933524 33933639 -111655649 - MIR SINE MIR -3 259 124 256 132 0 0 chr10 33933658 33933696 -111655592 - MLT1D LTR MaLR 0 505 468 3721 125 36 0 chr10 33933696 33934281 -111655007 - LTR24C LTR ERV1 0 635 30 1824 155 50 83 chr10 33934263 33934461 -111654827 - MLT1D LTR MaLR -119 386 183 * 2103 187 72 119 chr10 33934461 33935224 -111654064 - LTR8A LTR ERV1 0 727 1 1824 155 50 83 chr10 33935224 33935259 -111654029 - MLT1D LTR MaLR -322 183 148 2007 142 0 0 chr10 33935259 33935554 -111653734 + AluSx SINE Alu 1 295 -17 1824 155 50 83 chr10 33935554 33935718 -111653570 - MLT1D LTR MaLR -357 148 1 632 205 38 102 chr10 33936371 33936664 -111652624 - L1ME4a LINE L1 -176 5945 5672 1397 191 70 0 chr10 33936739 33937012 -111652276 - AluJo SINE Alu -20 292 1 21 36 0 0 chr10 33937012 33937040 -111652248 + AT_rich Low_complexity Low_complexity 1 28 0 216 274 0 16 chr10 33937207 33937269 -111652019 + CT-rich Low_complexity Low_complexity 5 65 0 2265 82 7 0 chr10 33937915 33938218 -111651070 - AluSp SINE Alu -8 305 1 455 312 93 11 chr10 33938420 33938620 -111650668 - MIR SINE MIR -40 222 4 217 376 112 0 chr10 33938723 33938848 -111650440 + L2 LINE L2 3117 3255 -17 458 282 151 62 chr10 33939587 33939837 -111649451 - MLT1L LTR MaLR 0 615 389 1549 160 43 43 chr10 33939837 33940137 -111649151 - AluJo SINE Alu -12 300 1 458 282 151 62 chr10 33940137 33940449 -111648839 - MLT1L LTR MaLR -226 389 3 1865 151 6 22 chr10 33940742 33941089 -111648199 - AluSx SINE Alu 0 342 1 551 279 35 35 chr10 33942301 33942473 -111646815 - MLT1J LTR MaLR -156 355 184 243 271 140 0 chr10 33942483 33942590 -111646698 - L1MCc LINE L1 -4431 2691 2570 1962 135 3 0 chr10 33942608 33942897 -111646391 - AluSx SINE Alu -14 298 9 518 213 49 129 chr10 33942912 33942956 -111646332 - L1M2 LINE L1 -4246 1970 1924 240 111 0 0 chr10 33942956 33943001 -111646287 + (CA)n Simple_repeat Simple_repeat 2 46 0 518 213 49 129 chr10 33943001 33943320 -111645968 - L1M2 LINE L1 -4292 1924 1564 * 43044 56 5 1 chr10 33943319 33949441 -111639847 + L1PA5 LINE L1 11 6154 0 1671 82 24 4 chr10 33949441 33949684 -111639604 + L1MA2 LINE L1 6045 6304 0 1737 168 0 0 chr10 33949761 33950047 -111639241 - AluJb SINE Alu -7 305 20 947 263 103 41 chr10 33950047 33950739 -111638549 - L1MCc LINE L1 -4893 1530 1262 547 313 46 51 chr10 33951245 33951679 -111637609 - L1MCc LINE L1 -5985 438 7 207 69 0 0 chr10 33952156 33952185 -111637103 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1884 130 7 21 chr10 33952188 33952473 -111636815 - AluSx SINE Alu -31 281 1 769 187 0 0 chr10 33953814 33953948 -111635340 - MER94 DNA DNA 0 134 1 338 303 40 40 chr10 33956246 33956421 -111632867 - L2 LINE L2 -219 3053 2879 282 160 0 0 chr10 33956498 33956548 -111632740 + (TG)n Simple_repeat Simple_repeat 2 51 0 368 270 36 36 chr10 33957803 33957914 -111631374 + L2 LINE L2 3203 3313 0 1084 233 24 12 chr10 33958171 33958424 -111630864 - MLT-int LTR MaLR -1093 642 387 1538 109 101 16 chr10 33958424 33958671 -111630617 - MSTA LTR MaLR 0 428 161 743 158 211 7 chr10 33958906 33959058 -111630230 - MSTA LTR MaLR -245 183 1 9816 129 7 54 chr10 33959059 33960714 -111628574 - MSTA-int LTR MaLR -1 1579 3 1721 152 156 9 chr10 33960716 33961031 -111628257 - MSTA LTR MaLR 0 428 68 880 200 43 0 chr10 33961031 33961221 -111628067 - MLT-int LTR MaLR -1477 103 32 247 257 138 18 chr10 33963823 33963932 -111625356 + L2 LINE L2 2924 3045 -227 248 292 97 18 chr10 33964759 33964872 -111624416 + MIR SINE MIR 20 141 -67 201 245 20 0 chr10 33965051 33965100 -111624188 + MIR3 SINE MIR 151 200 -8 321 219 0 117 chr10 33965929 33966057 -111623231 - L1ME4a LINE L1 0 6121 6009 216 0 0 0 chr10 33966080 33966104 -111623184 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 243 319 26 9 chr10 33966104 33966211 -111623077 - L1ME4a LINE L1 -198 5923 5815 2119 109 6 3 chr10 33966214 33966525 -111622763 - AluSx SINE Alu 0 312 1 446 310 108 25 chr10 33966754 33966957 -111622331 + MIR SINE MIR 1 220 -42 2225 116 7 3 chr10 33966994 33967304 -111621984 + AluSq SINE Alu 1 311 -2 1934 172 20 20 chr10 33967331 33967721 -111621567 + MLT1B LTR MaLR 1 390 0 409 240 10 0 chr10 33969224 33969320 -111619968 - MIR SINE MIR -111 151 55 401 214 42 10 chr10 33969989 33970094 -111619194 - L1ME4a LINE L1 -430 5736 5641 2672 173 20 9 chr10 33970096 33970554 -111618734 + Tigger1 DNA MER2_type 2 464 -1954 1996 166 119 8 chr10 33970554 33970939 -111618349 - MSTA LTR MaLR 0 428 1 2619 100 23 18 chr10 33970939 33971330 -111617958 - MSTA-int LTR MaLR 0 1580 1188 11167 116 19 15 chr10 33971330 33971841 -111617447 + Tigger1 DNA MER2_type 456 963 -1455 2391 92 0 0 chr10 33971841 33972136 -111617152 - AluY SINE Alu -16 295 1 1781 192 7 0 chr10 33972139 33972441 -111616847 - AluSx SINE Alu -8 304 1 11167 116 19 15 chr10 33972441 33973634 -111615654 + Tigger1 DNA MER2_type 964 2171 -247 4244 215 210 40 chr10 33973637 33974312 -111614976 - L1MDa LINE L1 -4658 1882 1323 2556 66 0 3 chr10 33974312 33974613 -111614675 + AluY SINE Alu 1 300 -11 4244 215 210 40 chr10 33974613 33974644 -111614644 - L1MDa LINE L1 -5217 1323 1299 207 0 0 0 chr10 33974644 33974667 -111614621 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4244 215 210 40 chr10 33974667 33975477 -111613811 - L1MDa LINE L1 -5241 1299 107 600 127 0 48 chr10 33975492 33975681 -111613607 + (TA)n Simple_repeat Simple_repeat 1 180 0 214 241 30 0 chr10 33975717 33975883 -111613405 + (TA)n Simple_repeat Simple_repeat 2 172 0 525 286 71 43 chr10 33976005 33976355 -111612933 + L2 LINE L2 2859 3218 -95 2055 116 3 23 chr10 33976358 33976660 -111612628 - AluSx SINE Alu -16 296 1 306 294 151 8 chr10 33977277 33977403 -111611885 - MIR3 SINE MIR -22 186 43 876 102 17 0 chr10 33977555 33977673 -111611615 - FLAM_C SINE Alu -17 126 7 376 161 0 5 chr10 33977995 33978089 -111611199 - FLAM_C SINE Alu 0 147 64 346 303 109 11 chr10 33978356 33978531 -111610757 + MIR SINE MIR 47 238 -24 1956 143 3 0 chr10 33978700 33978986 -111610302 - AluSx SINE Alu -11 301 15 2070 175 16 71 chr10 33979039 33979473 -111609815 + MLT1C LTR MaLR 36 446 -21 1696 169 172 5 chr10 33979473 33979840 -111609448 - MSTA LTR MaLR 0 428 1 2070 175 16 71 chr10 33979840 33979856 -111609432 + MLT1C LTR MaLR 446 461 -6 1532 213 78 23 chr10 33979873 33980268 -111609020 + MER63B DNA MER1_type 1 417 -19 313 302 69 38 chr10 33981234 33981393 -111607895 + MIR SINE MIR 62 225 -37 216 97 0 0 chr10 33981427 33981458 -111607830 + (GGA)n Simple_repeat Simple_repeat 3 33 0 5285 201 24 9 chr10 33981887 33983070 -111606218 + L1 LINE L1 4075 5274 -872 738 209 92 34 chr10 33983784 33983990 -111605298 + MER20 DNA MER1_type 2 219 0 2158 123 7 0 chr10 33984325 33984626 -111604662 - AluSg1 SINE Alu -6 303 1 2152 112 0 11 chr10 33984642 33984929 -111604359 - AluSx SINE Alu -28 284 1 2264 95 3 3 chr10 33985018 33985322 -111603966 - AluSx SINE Alu -8 304 1 1355 161 24 0 chr10 33985330 33985541 -111603747 - Tigger3(Golem) DNA MER2_type -2813 216 1 202 225 39 39 chr10 33985739 33985868 -111603420 + G-rich Low_complexity Low_complexity 2 130 0 335 262 99 0 chr10 33987070 33987211 -111602077 - MIR3 SINE MIR -5 203 49 1712 177 0 3 chr10 33987644 33987926 -111601362 + AluJo SINE Alu 1 281 -31 566 82 12 0 chr10 33987929 33988014 -111601274 + (GGAA)n Simple_repeat Simple_repeat 4 89 0 267 70 0 70 chr10 33988477 33988520 -111600768 + AluJ/FLAM SINE Alu 21 60 -242 425 215 11 11 chr10 33988520 33988613 -111600675 - AluJo SINE Alu -133 179 87 2579 80 0 43 chr10 33988801 33989174 -111600114 - MER4A LTR ERV1 -307 357 1 2079 153 0 7 chr10 33989356 33989657 -111599631 + AluSx SINE Alu 1 299 -13 183 42 0 0 chr10 33989661 33989685 -111599603 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 245 341 0 0 chr10 33989869 33989957 -111599331 + (TGAA)n Simple_repeat Simple_repeat 1 88 0 2329 181 12 5 chr10 33989974 33990161 -111599127 + MSTB LTR MaLR 14 198 -228 5235 46 16 0 chr10 33990161 33990788 -111598500 + L1PA8 LINE L1 5532 6168 -4 2329 181 12 5 chr10 33990788 33991010 -111598278 + MSTB LTR MaLR 198 426 0 457 268 38 65 chr10 33992385 33992646 -111596642 + L1ME4a LINE L1 5509 5762 -359 879 243 201 25 chr10 33992677 33993244 -111596044 - Charlie7 DNA MER1_type -23 2589 1923 2554 88 0 0 chr10 33993269 33993600 -111595688 - L1PA13 LINE L1 -8 6155 5825 283 0 23 45 chr10 33993602 33993646 -111595642 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 2049 117 7 3 chr10 33993646 33993928 -111595360 - AluSx SINE Alu -29 283 1 411 263 59 7 chr10 33993931 33994083 -111595205 + Charlie7 DNA MER1_type 1396 1555 -1057 1401 122 0 0 chr10 33994104 33994312 -111594976 + AluSq SINE Alu 95 302 0 1046 250 16 0 chr10 33994360 33994612 -111594676 - MIR SINE MIR -2 260 5 2445 225 187 51 chr10 33994642 33994957 -111594331 - Charlie7 DNA MER1_type -1296 1316 1045 2264 100 0 16 chr10 33994957 33995266 -111594022 - AluSq SINE Alu -7 306 3 1928 154 3 0 chr10 33995276 33995562 -111593726 - AluJb SINE Alu -25 287 1 2445 225 187 51 chr10 33995562 33996046 -111593242 - Charlie7 DNA MER1_type -1574 1038 621 1041 127 0 58 chr10 33996046 33996084 -111593204 - L1PB4 LINE L1 -1 6155 6116 1882 136 4 0 chr10 33996084 33996349 -111592939 - AluSx SINE Alu -12 300 35 1041 127 0 58 chr10 33996349 33996499 -111592789 - L1PB4 LINE L1 -40 6116 5978 2445 225 187 51 chr10 33996499 33996811 -111592477 - Charlie7 DNA MER1_type -1991 621 40 276 278 43 9 chr10 33996830 33996945 -111592343 + L1ME4a LINE L1 5791 5909 -212 1669 172 111 18 chr10 33997113 33997508 -111591780 + MSTB1 LTR MaLR 1 432 0 1111 97 0 7 chr10 33997941 33998086 -111591202 + FRAM SINE Alu 1 140 -36 2154 127 0 0 chr10 33998546 33998838 -111590450 - AluSx SINE Alu -12 300 9 1039 115 0 0 chr10 33998840 33998979 -111590309 - AluSq/x SINE Alu -174 139 1 1525 180 20 39 chr10 33999044 33999349 -111589939 + AluJo SINE Alu 1 299 -13 533 252 19 48 chr10 33999424 33999634 -111589654 - MIR SINE MIR -57 205 2 228 296 0 0 chr10 34000078 34000203 -111589085 + (TG)n Simple_repeat Simple_repeat 2 126 0 457 125 102 0 chr10 34001924 34002012 -111587276 + L1MB3 LINE L1 6080 6176 -7 1700 181 6 22 chr10 34002015 34002330 -111586958 - AluJo SINE Alu 0 312 3 2094 105 87 19 chr10 34002330 34002653 -111586635 + THE1B LTR MaLR 1 345 -19 1674 83 5 14 chr10 34003055 34003271 -111586017 + AluSq SINE Alu 1 214 -99 1473 163 4 0 chr10 34003278 34003505 -111585783 - AluJb SINE Alu -82 230 3 729 138 50 50 chr10 34003507 34003666 -111585622 + L1MB4 LINE L1 6020 6178 -2 207 88 0 0 chr10 34003795 34003829 -111585459 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 207 0 0 0 chr10 34003828 34003851 -111585437 + (TC)n Simple_repeat Simple_repeat 2 24 0 740 130 16 32 chr10 34003851 34003974 -111585314 - AluSx SINE Alu -10 299 179 285 44 267 0 chr10 34003975 34004020 -111585268 + AluSg/x SINE Alu 138 194 -106 1345 106 0 32 chr10 34004021 34004209 -111585079 - AluSx SINE Alu -130 182 1 212 280 121 51 chr10 34005262 34005419 -111583869 + MIR SINE MIR 24 191 -71 2025 137 7 10 chr10 34005424 34005716 -111583572 + AluSx SINE Alu 1 291 -21 471 269 32 19 chr10 34005800 34005956 -111583332 - MIR SINE MIR -10 252 95 1943 162 0 7 chr10 34005980 34006288 -111583000 + AluJo SINE Alu 1 306 -6 787 157 0 0 chr10 34006309 34006424 -111582864 + FLAM_C SINE Alu 4 118 -15 1505 174 89 0 chr10 34007926 34008208 -111581080 - AluJo SINE Alu -3 309 3 1020 135 22 17 chr10 34008696 34008874 -111580414 + L1PA16 LINE L1 5979 6157 -9 21 82 0 0 chr10 34009608 34009657 -111579631 + AT_rich Low_complexity Low_complexity 1 49 0 4206 192 120 35 chr10 34009732 34010691 -111578597 - Charlie1 DNA MER1_type 0 2761 1885 2020 144 0 0 chr10 34010691 34010982 -111578306 + AluJb SINE Alu 1 291 -21 4206 192 120 35 chr10 34010982 34011030 -111578258 - Charlie1 DNA MER1_type -876 1885 1842 2360 108 0 13 chr10 34011030 34011344 -111577944 + AluSg SINE Alu 1 310 0 4206 192 120 35 chr10 34011344 34011512 -111577776 - Charlie1 DNA MER1_type -919 1842 1485 1162 200 225 48 chr10 34011512 34012091 -111577197 + L1MC4 LINE L1 7373 7785 0 242 182 68 68 chr10 34012167 34012255 -111577033 + L1MC4a LINE L1 6052 6139 -1669 1235 186 127 22 chr10 34012268 34012543 -111576745 - AluJo SINE Alu -8 304 1 1896 139 0 4 chr10 34012574 34012854 -111576434 - AluJo SINE Alu -23 289 11 423 296 117 41 chr10 34013140 34013436 -111575852 - L1M4 LINE L1 -2916 3230 2958 1915 163 3 6 chr10 34013436 34013749 -111575539 - AluJo SINE Alu 0 312 1 423 296 117 41 chr10 34013749 34013963 -111575325 - L1M4 LINE L1 -3188 2958 2681 852 107 0 8 chr10 34014182 34014303 -111574985 - AluSg/x SINE Alu -17 295 176 283 244 65 24 chr10 34014313 34014436 -111574852 - HAL1b LINE L1 -539 809 682 328 244 156 19 chr10 34014488 34014648 -111574640 - L1ME3A LINE L1 -182 6057 5876 5176 255 116 28 chr10 34014678 34014768 -111574520 - L1MEc LINE L1 -1303 4912 4831 1477 110 13 31 chr10 34014768 34014996 -111574292 + MER30 DNA MER1_type 4 227 -3 5176 255 116 28 chr10 34014996 34015153 -111574135 - L1MEc LINE L1 -1384 4831 4689 2465 66 10 0 chr10 34015153 34015458 -111573830 - AluY SINE Alu -3 308 1 5176 255 116 28 chr10 34015458 34017538 -111571750 - L1MEc LINE L1 -1526 4689 2376 2069 125 4 0 chr10 34017538 34017820 -111571468 + AluSx SINE Alu 1 313 0 198 33 33 0 chr10 34017820 34017850 -111571438 + (CAAA)n Simple_repeat Simple_repeat 2 176 0 5176 255 116 28 chr10 34017850 34018057 -111571231 - L1MEc LINE L1 -3839 2376 2189 265 65 109 0 chr10 34018223 34018269 -111571019 - L1PA15 LINE L1 0 6165 6115 2783 90 29 0 chr10 34018225 34018635 -111570653 - L1PA13 LINE L1 0 6163 5742 225 0 0 0 chr10 34018748 34018773 -111570515 + (CA)n Simple_repeat Simple_repeat 2 26 0 507 282 148 37 chr10 34018943 34019333 -111569955 - L1MEc LINE L1 -4677 1540 1195 180 0 0 0 chr10 34019333 34019353 -111569935 + (TTA)n Simple_repeat Simple_repeat 2 21 0 507 282 148 37 chr10 34019353 34019761 -111569527 - L1MEc LINE L1 -5022 1195 791 441 204 88 18 chr10 34019836 34019949 -111569339 - L1ME2 LINE L1 -8 6156 6036 481 237 53 0 chr10 34019984 34020136 -111569152 + L1ME1 LINE L1 5733 5892 -274 1914 108 22 4 chr10 34020148 34020464 -111568824 + AluSx SINE Alu 1 321 0 479 327 149 18 chr10 34020537 34020873 -111568415 - L3 LINE CR1 -805 772 393 1966 130 0 0 chr10 34021127 34021453 -111567835 + AluSx SINE Alu 1 326 0 921 155 113 36 chr10 34021729 34021923 -111567365 + MER2 DNA MER2_type 1 209 -136 232 233 100 0 chr10 34021969 34022029 -111567259 + MER2 DNA MER2_type 280 345 0 242 61 0 0 chr10 34022998 34023031 -111566257 + MER63C DNA MER1_type 1 33 -897 2665 181 91 16 chr10 34023079 34023697 -111565591 + MER63C DNA MER1_type 131 794 -136 1928 232 95 54 chr10 34023735 34024085 -111565203 - L1MC5 LINE L1 -455 7506 7172 2474 53 0 3 chr10 34024085 34024389 -111564899 - AluY SINE Alu -8 303 1 1928 232 95 54 chr10 34024389 34024992 -111564296 - L1MC5 LINE L1 -789 7172 6518 22 35 0 0 chr10 34026957 34026986 -111562302 + AT_rich Low_complexity Low_complexity 1 29 0 255 317 0 12 chr10 34027095 34027177 -111562111 + Charlie5 DNA MER1_type 2 82 -2530 1985 61 0 27 chr10 34027177 34027438 -111561850 - AluY SINE Alu -21 290 37 2192 153 77 34 chr10 34027477 34028067 -111561221 - L1MB3 LINE L1 -519 5664 5068 * 2370 140 110 7 chr10 34028060 34028523 -111560765 + L1MB3 LINE L1 5666 6176 -7 256 152 0 22 chr10 34028524 34028570 -111560718 + Charlie5 DNA MER1_type 163 207 -2405 * 264 176 0 20 chr10 34028532 34028583 -111560705 - MER3 DNA MER1_type -123 86 37 359 229 110 28 chr10 34028984 34029093 -111560195 + MIR3 SINE MIR 68 185 -23 1694 164 67 12 chr10 34029151 34029481 -111559807 + MER7A DNA MER2_type 1 346 0 23 0 0 0 chr10 34029949 34029972 -111559316 + GC_rich Low_complexity Low_complexity 1 23 0 2192 88 14 7 chr10 34030832 34031129 -111558159 - AluSq SINE Alu -14 299 1 333 0 0 0 chr10 34031807 34031844 -111557444 + (CA)n Simple_repeat Simple_repeat 1 37 0 416 286 134 52 chr10 34034547 34034778 -111554510 - MIR SINE MIR -9 253 4 483 317 145 38 chr10 34037105 34037449 -111551839 + L2 LINE L2 2918 3298 -15 21 36 0 0 chr10 34037701 34037729 -111551559 + AT_rich Low_complexity Low_complexity 1 28 0 1588 168 58 3 chr10 34037822 34038113 -111551175 - AluJo SINE Alu -5 307 1 2175 107 0 22 chr10 34040991 34041310 -111547978 + AluSx SINE Alu 1 312 0 1387 279 85 9 chr10 34041402 34041965 -111547323 - L1M3 LINE L1 -1125 5021 4416 2022 126 7 7 chr10 34042026 34042327 -111546961 + AluSx SINE Alu 1 301 -11 378 0 0 0 chr10 34042328 34042370 -111546918 + (TG)n Simple_repeat Simple_repeat 2 43 0 939 145 33 0 chr10 34043225 34043377 -111545911 + FRAM SINE Alu 1 157 -9 571 245 14 0 chr10 34044888 34045031 -111544257 + MER103 DNA DNA 21 165 -1 41 0 0 0 chr10 34045280 34045321 -111543967 + AT_rich Low_complexity Low_complexity 1 41 0 898 279 84 43 chr10 34045580 34046067 -111543221 + MLT1H LTR MaLR 43 549 0 541 181 16 8 chr10 34046112 34046239 -111543049 - L1MC2 LINE L1 -2 6342 6215 234 0 0 0 chr10 34046872 34046898 -111542390 + (TA)n Simple_repeat Simple_repeat 1 26 0 529 292 92 24 chr10 34046898 34047148 -111542140 + L1MC/D LINE L1 5426 5692 -2116 647 164 185 14 chr10 34048971 34049117 -111540171 + MER20 DNA MER1_type 19 189 -30 301 269 160 17 chr10 34049263 34049382 -111539906 + L2 LINE L2 3126 3261 -11 186 71 0 0 chr10 34049382 34049410 -111539878 + (CAAA)n Simple_repeat Simple_repeat 3 30 0 21 0 0 0 chr10 34050747 34050768 -111538520 + AT_rich Low_complexity Low_complexity 1 21 0 516 257 73 90 chr10 34051640 34051885 -111537403 + MIR SINE MIR 21 261 -1 193 399 74 25 chr10 34053363 34053526 -111535762 + L2 LINE L2 3087 3257 -15 2521 58 0 6 chr10 34053669 34053980 -111535308 + AluY SINE Alu 1 309 -2 294 228 74 34 chr10 34054380 34054529 -111534759 - L1MEd LINE L1 -3866 2263 2109 826 204 65 48 chr10 34054794 34055024 -111534264 + Charlie1 DNA MER1_type 1708 1941 -820 2199 96 0 0 chr10 34055029 34055340 -111533948 + AluSx SINE Alu 1 311 0 1467 179 65 10 chr10 34055346 34055654 -111533634 + L1MB2 LINE L1 5843 6167 -4 2859 201 102 21 chr10 34055654 34056427 -111532861 + Charlie1 DNA MER1_type 1925 2760 -1 528 254 119 79 chr10 34056886 34057442 -111531846 + L1MC4a LINE L1 5296 5873 -1935 385 311 92 0 chr10 34060136 34060300 -111528988 + MIR SINE MIR 83 261 -1 705 313 30 27 chr10 34060417 34060823 -111528465 - L1M4 LINE L1 -867 5279 4873 1003 206 0 5 chr10 34060871 34061065 -111528223 - AluJo SINE Alu -20 292 100 504 285 167 39 chr10 34061175 34061799 -111527489 - L1M4 LINE L1 -1445 4701 3998 1951 166 0 0 chr10 34061833 34062135 -111527153 + AluSx SINE Alu 3 304 -8 5093 203 102 33 chr10 34062136 34063786 -111525502 - L1MDb LINE L1 -3899 2507 749 496 287 36 37 chr10 34064600 34064910 -111524378 - L1MEd LINE L1 -1033 1457 1048 2086 99 49 0 chr10 34065119 34065403 -111523885 + AluSg SINE Alu 1 298 -12 25 51 0 0 chr10 34066540 34066579 -111522709 + AT_rich Low_complexity Low_complexity 1 39 0 24 0 0 0 chr10 34067432 34067456 -111521832 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr10 34068946 34068969 -111520319 + AT_rich Low_complexity Low_complexity 1 23 0 2076 76 60 33 chr10 34069055 34069356 -111519932 - AluSp SINE Alu -4 309 1 805 147 0 0 chr10 34071175 34071291 -111517997 + FLAM_C SINE Alu 1 116 -17 365 70 18 0 chr10 34071314 34071371 -111517917 + (GGA)n Simple_repeat Simple_repeat 3 60 0 22 0 0 0 chr10 34072702 34072724 -111516564 + AT_rich Low_complexity Low_complexity 1 22 0 252 354 121 39 chr10 34072746 34073385 -111515903 + L1MEd LINE L1 134 824 -5295 405 238 78 122 chr10 34073389 34073822 -111515466 + L1MC4 LINE L1 7625 8038 -4 427 276 91 41 chr10 34073944 34074423 -111514865 + L1MEd LINE L1 1065 1608 -4702 1751 166 3 7 chr10 34074454 34074737 -111514551 + AluJo SINE Alu 1 282 -30 602 197 0 57 chr10 34074969 34075091 -111514197 + FLAM_A SINE Alu 1 115 -18 541 173 55 9 chr10 34075092 34075202 -111514086 - MER20 DNA MER1_type -88 131 17 740 276 180 43 chr10 34075273 34075872 -111513416 + HAL1 LINE L1 44 724 -1783 830 184 24 12 chr10 34075906 34076074 -111513214 + HAL1 LINE L1 1544 1713 -794 2006 101 83 0 chr10 34076326 34076604 -111512684 - AluSx SINE Alu -11 301 1 1293 174 114 23 chr10 34077331 34077595 -111511693 + AluJo SINE Alu 1 288 -24 632 282 41 12 chr10 34078432 34078602 -111510686 + MIR3 SINE MIR 28 202 -6 22 0 0 0 chr10 34078909 34078931 -111510357 + AT_rich Low_complexity Low_complexity 1 22 0 851 209 47 28 chr10 34079099 34079229 -111510059 - MER20 DNA MER1_type 0 219 82 462 18 0 0 chr10 34079229 34079284 -111510004 + (CA)n Simple_repeat Simple_repeat 1 55 0 851 209 47 28 chr10 34079284 34079368 -111509920 - MER20 DNA MER1_type -137 82 1 342 283 138 13 chr10 34080074 34080233 -111509055 + L1M4 LINE L1 3599 3777 -2369 328 257 20 0 chr10 34080307 34080408 -111508880 + L1M4 LINE L1 3890 3992 -2154 223 295 33 0 chr10 34081055 34081116 -111508172 + L2 LINE L2 3250 3312 -1 226 325 148 48 chr10 34081702 34082126 -111507162 - L2 LINE L2 -557 2757 2231 2328 74 0 10 chr10 34082126 34082425 -111506863 + AluY SINE Alu 1 296 -15 226 325 148 48 chr10 34082425 34082514 -111506774 - L2 LINE L2 -1083 2231 2152 427 310 101 12 chr10 34082826 34083084 -111506204 + L1MEc LINE L1 34 314 -6082 2156 84 3 20 chr10 34083153 34083449 -111505839 - AluSp SINE Alu -20 293 3 674 135 0 0 chr10 34083637 34083741 -111505547 - AluSg/x SINE Alu -2 307 204 551 271 152 20 chr10 34084113 34084412 -111504876 + L1ME LINE L1 5489 5780 -341 2083 103 17 10 chr10 34084450 34084741 -111504547 + AluSx SINE Alu 1 293 -19 239 138 138 35 chr10 34085075 34085133 -111504155 - MER5A DNA MER1_type -24 165 102 1660 152 67 0 chr10 34085186 34085456 -111503832 + AluJo SINE Alu 1 288 -24 1981 144 0 0 chr10 34085787 34086093 -111503195 + AluSx SINE Alu 1 306 0 2177 105 7 3 chr10 34086755 34087061 -111502227 - AluSp SINE Alu -6 307 1 24 0 0 0 chr10 34087061 34087085 -111502203 + AT_rich Low_complexity Low_complexity 1 24 0 215 352 59 73 chr10 34087446 34087733 -111501555 - L2 LINE L2 -44 3228 2946 305 355 65 0 chr10 34088575 34088699 -111500589 + L2 LINE L2 3136 3267 -5 188 328 139 34 chr10 34088740 34089366 -111499922 + L2 LINE L2 2167 2858 -456 1589 182 75 0 chr10 34089589 34089947 -111499341 - Charlie5 DNA MER1_type 0 2618 2234 534 172 40 8 chr10 34089941 34090079 -111499209 - Charlie5 DNA MER1_type -2496 116 1 * 221 366 24 24 chr10 34090092 34090174 -111499114 + L2 LINE L2 3137 3218 -54 2363 97 0 0 chr10 34091226 34091535 -111497753 + AluSx SINE Alu 3 311 -1 2687 128 103 8 chr10 34092200 34092694 -111496594 - L1MB3 LINE L1 -6 6177 5637 1881 139 33 3 chr10 34092768 34093071 -111496217 + AluSx SINE Alu 1 312 0 1421 183 103 0 chr10 34094342 34094615 -111494673 + AluJb SINE Alu 1 301 -11 493 290 112 23 chr10 34094861 34095075 -111494213 + Tigger8 DNA MER2_type 25 257 -409 1081 209 32 18 chr10 34095139 34095359 -111493929 + MER58A DNA MER1_type 2 224 0 1515 154 108 4 chr10 34095661 34095920 -111493368 + AluJb SINE Alu 1 286 -26 28 48 0 0 chr10 34096004 34096046 -111493242 + AT_rich Low_complexity Low_complexity 1 42 0 265 366 0 0 chr10 34096589 34096671 -111492617 + L2 LINE L2 3191 3272 0 761 188 8 0 chr10 34096861 34096989 -111492299 + FLAM_C SINE Alu 3 131 -12 1267 172 35 18 chr10 34097317 34097544 -111491744 + AluJb SINE Alu 1 231 -81 325 200 0 0 chr10 34097594 34097649 -111491639 - AluJb SINE Alu -89 213 159 201 74 0 0 chr10 34097681 34097708 -111491580 + (A)n Simple_repeat Simple_repeat 1 27 0 207 286 14 71 chr10 34098193 34098263 -111491025 - MIR SINE MIR -196 66 1 2461 11 0 0 chr10 34098448 34098716 -111490572 - AluYa5 SINE Alu -13 298 31 2193 125 0 6 chr10 34099065 34099376 -111489912 + AluSg SINE Alu 1 309 -1 2375 88 3 0 chr10 34099546 34099841 -111489447 + AluSp SINE Alu 1 296 -17 1843 169 0 10 chr10 34100246 34100547 -111488741 - AluJb SINE Alu -14 298 1 23 33 0 0 chr10 34100626 34100656 -111488632 + AT_rich Low_complexity Low_complexity 1 30 0 2870 154 113 92 chr10 34100705 34101488 -111487800 - Charlie1 DNA MER1_type -63 2698 1892 800 124 8 0 chr10 34101488 34101609 -111487679 - L1MA1 LINE L1 0 6302 6181 2870 154 113 92 chr10 34101609 34101715 -111487573 - Charlie1 DNA MER1_type -869 1892 1790 2175 121 0 0 chr10 34102069 34102366 -111486922 + AluSx SINE Alu 1 297 -15 1774 170 13 113 chr10 34103518 34103978 -111485310 - MLT2D LTR ERVL 0 414 1 185 259 103 35 chr10 34104090 34104148 -111485140 - L2 LINE L2 -87 3185 3124 2512 72 0 0 chr10 34104183 34104489 -111484799 - AluY SINE Alu -5 306 1 349 260 66 77 chr10 34105049 34105245 -111484043 + MLT1K LTR MaLR 395 588 0 2240 101 0 7 chr10 34105448 34105744 -111483544 - AluSx SINE Alu -18 294 1 1618 136 163 0 chr10 34106152 34106416 -111482872 - AluSx SINE Alu -5 307 1 277 245 68 30 chr10 34106644 34106754 -111482534 - MIR SINE MIR -62 146 46 5623 86 5 0 chr10 34107823 34108595 -111480693 - L1PA5 LINE L1 -4202 1944 1169 * 27488 40 8 0 chr10 34108593 34112776 -111476512 + L1PA5 LINE L1 1938 6146 -8 26 0 0 0 chr10 34112776 34112802 -111476486 + AT_rich Low_complexity Low_complexity 1 26 0 2716 244 59 61 chr10 34113296 34114376 -111474912 + L1MCb LINE L1 2 1079 -4966 1802 163 7 0 chr10 34114376 34114658 -111474630 + AluJb SINE Alu 1 284 -28 1396 187 37 0 chr10 34114677 34114995 -111474293 + L1MB8 LINE L1 5216 5543 -641 634 81 11 0 chr10 34114995 34115082 -111474206 - AluSc SINE Alu -221 88 1 1795 138 48 0 chr10 34115100 34115390 -111473898 + MER7A DNA MER2_type 1 302 -44 1286 199 65 24 chr10 34115401 34115737 -111473551 + L1MB8 LINE L1 5679 6028 -150 804 226 14 5 chr10 34115736 34115948 -111473340 + L1M4 LINE L1 4456 4669 -1477 * 299 293 155 56 chr10 34116152 34116384 -111472904 - L2 LINE L2 -190 3082 2828 257 365 88 19 chr10 34116382 34116541 -111472747 - L2 LINE L2 -640 2674 2505 * 344 318 143 16 chr10 34116602 34116698 -111472590 + L2 LINE L2 3014 3096 -217 2005 174 43 0 chr10 34116698 34117048 -111472240 + MLT1A1 LTR MaLR 1 365 0 344 318 143 16 chr10 34117048 34117209 -111472079 + L2 LINE L2 3096 3304 -9 2329 104 0 0 chr10 34117385 34117692 -111471596 + AluSg1 SINE Alu 1 307 -2 1075 165 36 64 chr10 34118240 34118489 -111470799 + L1MB5 LINE L1 5925 6166 -8 637 329 55 88 chr10 34120325 34120866 -111468422 - L2 LINE L2 0 3272 2758 1468 153 0 118 chr10 34120866 34121014 -111468274 + AluJo SINE Alu 1 88 -224 2262 118 0 3 chr10 34121014 34121318 -111467970 + AluSx SINE Alu 1 303 -9 1468 153 0 118 chr10 34121318 34121509 -111467779 + AluJo SINE Alu 88 300 -12 637 329 55 88 chr10 34121509 34121528 -111467760 - L2 LINE L2 -514 2758 2740 25 31 0 0 chr10 34121831 34121863 -111467425 + AT_rich Low_complexity Low_complexity 1 32 0 224 254 15 0 chr10 34123622 34123689 -111465599 + (TA)n Simple_repeat Simple_repeat 1 68 0 1886 165 19 80 chr10 34123829 34124254 -111465034 + MER47B DNA MER2_type 20 418 0 326 336 9 0 chr10 34126270 34126383 -111462905 + MIR SINE MIR 83 196 -66 2216 99 0 13 chr10 34126585 34126889 -111462399 - AluSg SINE Alu -10 300 1 333 0 0 0 chr10 34127313 34127350 -111461938 + (TA)n Simple_repeat Simple_repeat 1 37 0 742 148 9 0 chr10 34127350 34127465 -111461823 - FLAM_C SINE Alu -17 116 1 2105 174 47 20 chr10 34127897 34127971 -111461317 - MER65C LTR ERV1 0 461 390 306 0 0 0 chr10 34127971 34128005 -111461283 + (TA)n Simple_repeat Simple_repeat 2 35 0 2105 174 47 20 chr10 34128005 34128379 -111460909 - MER65C LTR ERV1 -71 390 1 2083 135 0 3 chr10 34128399 34128688 -111460600 - AluSx SINE Alu -24 288 1 1751 170 0 24 chr10 34129309 34129629 -111459659 - AluJo SINE Alu 0 313 1 780 250 79 29 chr10 34129887 34130203 -111459085 - L1MC4a LINE L1 -1905 5903 5572 21 57 0 0 chr10 34130239 34130274 -111459014 + AT_rich Low_complexity Low_complexity 1 35 0 399 281 25 33 chr10 34130355 34130476 -111458812 - L2 LINE L2 -4 3309 3190 340 306 96 94 chr10 34131791 34132438 -111456850 + L1M2 LINE L1 458 1105 -5744 308 314 81 78 chr10 34132395 34132656 -111456632 - L1M2 LINE L1 -5596 1253 989 * 189 0 0 0 chr10 34132656 34132677 -111456611 + (CGG)n Simple_repeat Simple_repeat 3 23 0 308 314 81 78 chr10 34132677 34132762 -111456526 - L1M2 LINE L1 -5860 989 906 21 0 0 0 chr10 34132857 34132878 -111456410 + GC_rich Low_complexity Low_complexity 1 21 0 289 251 14 0 chr10 34132888 34133038 -111456250 + (TG)n Simple_repeat Simple_repeat 1 152 0 247 158 0 0 chr10 34135065 34135103 -111454185 - MER5A DNA MER1_type -1 188 151 716 193 77 42 chr10 34135159 34135418 -111453870 - MER33 DNA MER1_type -4 320 53 341 321 102 7 chr10 34135469 34135606 -111453682 + MER5A DNA MER1_type 1 150 -39 1247 171 41 4 chr10 34135607 34135876 -111453412 + L1MC3 LINE L1 7507 7785 0 668 264 72 10 chr10 34136019 34136212 -111453076 - MIR SINE MIR 0 262 58 303 298 53 21 chr10 34136381 34136475 -111452813 - MIR SINE MIR -146 116 20 21 0 0 0 chr10 34136563 34136584 -111452704 + AT_rich Low_complexity Low_complexity 1 21 0 535 194 54 0 chr10 34136604 34136733 -111452555 + L1ME1 LINE L1 5778 5913 -253 1322 191 110 3 chr10 34136886 34137222 -111452066 - L1ME LINE L1 -379 5787 5416 636 168 24 60 chr10 34137239 34137260 -111452028 - L1MA10 LINE L1 0 6334 6314 2277 226 82 34 chr10 34137260 34138058 -111451230 - L1ME1 LINE L1 -9 6157 5322 1629 205 3 16 chr10 34138060 34138367 -111450921 - AluJo SINE Alu -9 303 1 753 188 128 15 chr10 34138375 34138641 -111450647 - L1ME1 LINE L1 -2451 3695 3400 1189 113 0 18 chr10 34138642 34138810 -111450478 + FRAM SINE Alu 1 162 -14 293 270 51 0 chr10 34138810 34138947 -111450341 - L1ME1 LINE L1 -2744 3402 3259 4167 196 52 36 chr10 34139074 34140520 -111448768 + L1MC3 LINE L1 4744 6166 20 1981 139 13 7 chr10 34140520 34140830 -111448458 + AluSx SINE Alu 1 312 0 1894 152 7 16 chr10 34140836 34141145 -111448143 + AluSx SINE Alu 1 306 -6 4167 196 52 36 chr10 34141145 34141331 -111447957 + L1MC3 LINE L1 5221 5403 -743 1100 192 105 19 chr10 34141333 34141656 -111447632 - MLT1D LTR MaLR -154 351 1 1154 218 26 54 chr10 34141656 34141980 -111447308 + L1M4 LINE L1 4675 4988 -1158 1644 209 17 0 chr10 34141980 34142272 -111447016 + AluJo SINE Alu 1 297 -15 1154 218 26 54 chr10 34142272 34142337 -111446951 + L1M4 LINE L1 4988 5053 -1093 1382 201 25 22 chr10 34142357 34142671 -111446617 + MLT2D LTR ERVL 1 315 -99 1799 165 55 0 chr10 34142671 34142998 -111446290 - MER7A DNA MER2_type -3 343 1 232 253 13 0 chr10 34143060 34143135 -111446153 + L1M4 LINE L1 5086 5161 -985 4851 161 24 30 chr10 34143139 34144227 -111445061 + L1MD1 LINE L1 5089 6175 -67 1940 153 0 3 chr10 34144227 34144514 -111444774 - AluJb SINE Alu -26 286 1 4851 161 24 30 chr10 34144514 34144582 -111444706 + L1MD1 LINE L1 6175 6242 0 243 189 19 0 chr10 34144678 34144731 -111444557 + L1ME3 LINE L1 6067 6120 -42 21 0 0 0 chr10 34144760 34144781 -111444507 + AT_rich Low_complexity Low_complexity 1 21 0 769 169 0 0 chr10 34144846 34144970 -111444318 - FLAM_A SINE Alu -7 135 12 354 348 57 16 chr10 34144994 34145241 -111444047 - L2 LINE L2 -1396 1918 1662 641 248 139 12 chr10 34145488 34145932 -111443356 + MLT1F LTR MaLR 1 542 0 371 232 136 32 chr10 34145958 34146083 -111443205 - MIR SINE MIR -117 145 8 267 319 62 57 chr10 34146099 34146309 -111442979 - L2 LINE L2 -1883 1431 1221 1760 171 10 29 chr10 34146926 34147235 -111442053 + AluJb SINE Alu 1 303 -9 1813 168 25 68 chr10 34149015 34149198 -111440090 + MLT1C LTR MaLR 1 190 -277 1903 182 0 0 chr10 34149198 34149494 -111439794 + AluJb SINE Alu 5 300 -12 1813 168 25 68 chr10 34149494 34149798 -111439490 + MLT1C LTR MaLR 190 467 0 2101 110 14 0 chr10 34150591 34150904 -111438384 - AluSx SINE Alu 0 317 1 1588 186 21 0 chr10 34150910 34151190 -111438098 - AluJb SINE Alu -26 286 1 751 254 92 25 chr10 34151190 34151517 -111437771 + L1MC4 LINE L1 7295 7643 -399 364 262 14 90 chr10 34151517 34151662 -111437626 + L2 LINE L2 2308 2441 -873 691 189 0 0 chr10 34152496 34152623 -111436665 - L1 LINE L1 -886 5260 5134 294 241 0 23 chr10 34153247 34153334 -111435954 + GA-rich Low_complexity Low_complexity 2 86 0 887 197 23 14 chr10 34153756 34153974 -111435314 - L1 LINE L1 -1000 5146 4927 4772 164 21 16 chr10 34153987 34154685 -111434603 + L1MA8 LINE L1 5255 5961 -330 2403 84 3 0 chr10 34154685 34154984 -111434304 + AluSp SINE Alu 1 300 -13 4772 164 21 16 chr10 34154984 34155282 -111434006 + L1MA8 LINE L1 5961 6256 -35 2188 100 0 0 chr10 34156206 34156495 -111432793 - AluSg SINE Alu -21 289 1 2117 123 7 3 chr10 34156708 34157009 -111432279 + AluSc SINE Alu 1 302 -7 257 75 25 0 chr10 34157418 34157458 -111431830 + L1P LINE L1 5322 5362 -794 290 218 0 0 chr10 34157458 34157513 -111431775 + Tigger5 DNA MER2_type 1 55 -2268 1379 144 9 19 chr10 34157535 34157750 -111431538 - AluJo SINE Alu -13 299 87 425 226 0 0 chr10 34157753 34157837 -111431451 + Tigger5 DNA MER2_type 2240 2323 0 297 0 0 0 chr10 34157966 34157999 -111431289 + (CA)n Simple_repeat Simple_repeat 1 33 0 3938 147 21 31 chr10 34157999 34158059 -111431229 + L1MB3 LINE L1 5435 5494 -689 1676 193 3 14 chr10 34158059 34158355 -111430933 + AluJo SINE Alu 1 293 -19 3938 147 21 31 chr10 34158355 34159038 -111430250 + L1MB3 LINE L1 5494 6171 -12 2307 83 6 13 chr10 34159148 34159461 -111429827 + AluY SINE Alu 1 311 0 2150 81 39 0 chr10 34159474 34159757 -111429531 + AluSg SINE Alu 1 294 -16 2362 88 3 0 chr10 34159808 34160114 -111429174 + AluSg SINE Alu 1 307 -3 207 0 0 0 chr10 34160303 34160326 -111428962 + (TTTTTG)n Simple_repeat Simple_repeat 3 25 0 301 260 135 0 chr10 34160332 34160436 -111428852 + L1MC/D LINE L1 5485 5602 -757 1351 220 52 67 chr10 34160443 34160632 -111428656 + L1M4 LINE L1 2720 2910 -3236 1555 157 37 33 chr10 34160632 34160931 -111428357 + AluJb SINE Alu 1 300 -12 1351 220 52 67 chr10 34160931 34161121 -111428167 + L1M4 LINE L1 2910 3101 -3045 2393 94 0 0 chr10 34161121 34161428 -111427860 + AluSg SINE Alu 1 307 -3 1351 220 52 67 chr10 34161428 34161547 -111427741 + L1M4 LINE L1 3101 3211 -2935 1743 159 40 13 chr10 34161547 34161849 -111427439 + AluJb SINE Alu 3 312 0 1351 220 52 67 chr10 34161849 34161957 -111427331 + L1M4 LINE L1 3211 3319 -2827 1115 85 0 14 chr10 34162070 34162211 -111427077 - AluSq/x SINE Alu -174 139 1 1594 158 10 59 chr10 34162919 34163223 -111426065 + AluJo SINE Alu 1 289 -23 229 242 185 70 chr10 34163243 34163311 -111425977 - MER5A DNA MER1_type -6 183 124 2043 226 66 35 chr10 34163311 34163887 -111425401 - MLT1G1 LTR MaLR 0 595 2 229 242 185 70 chr10 34163887 34163975 -111425313 - MER5A DNA MER1_type -65 124 9 2029 152 19 0 chr10 34164201 34164510 -111424778 - 7SLRNA srpRNA srpRNA -5 315 1 258 276 68 98 chr10 34164870 34165033 -111424255 - L2 LINE L2 -1 3312 3155 330 230 14 14 chr10 34165036 34165110 -111424178 + Charlie1 DNA MER1_type 7 80 -2681 * 1968 188 67 4 chr10 34165100 34165621 -111423667 + Charlie1 DNA MER1_type 2144 2697 -64 1767 52 0 4 chr10 34165673 34165904 -111423384 + LTR9 LTR ERV1 1 230 -382 419 95 0 54 chr10 34165904 34165978 -111423310 + FLAM_A SINE Alu 68 137 -5 605 226 0 16 chr10 34166636 34166760 -111422528 + L2 LINE L2 3185 3306 -7 592 288 63 54 chr10 34166778 34167125 -111422163 - L2 LINE L2 -249 3064 2710 3624 162 28 35 chr10 34167125 34167818 -111421470 + L1MB3 LINE L1 5444 6133 -50 2400 89 0 0 chr10 34167818 34168121 -111421167 + AluSx SINE Alu 7 309 -3 3624 162 28 35 chr10 34168121 34168169 -111421119 + L1MB3 LINE L1 6133 6180 -3 592 288 63 54 chr10 34168169 34168234 -111421054 - L2 LINE L2 -603 2710 2647 2021 151 3 0 chr10 34168431 34168730 -111420558 + AluJb SINE Alu 1 300 -12 1008 194 131 33 chr10 34168791 34169029 -111420259 + Charlie1 DNA MER1_type 2350 2630 -131 2246 121 0 3 chr10 34169029 34169336 -111419952 - AluSg SINE Alu -4 306 1 1008 194 131 33 chr10 34169336 34169426 -111419862 + Charlie1 DNA MER1_type 2630 2710 -51 754 149 91 26 chr10 34169432 34169586 -111419702 - FRAM SINE Alu -21 155 1 441 206 19 0 chr10 34169636 34169743 -111419545 + MLT1L LTR MaLR 165 273 -342 374 249 17 83 chr10 34169903 34170023 -111419265 - L1ME LINE L1 -417 5704 5598 2369 92 0 0 chr10 34170023 34170317 -111418971 + AluSp SINE Alu 1 294 -19 374 249 17 83 chr10 34170317 34170377 -111418911 - L1ME LINE L1 -523 5598 5536 232 206 0 73 chr10 34170384 34170452 -111418836 - MIR SINE MIR -5 257 195 434 295 176 4 chr10 34170453 34170697 -111418591 - L1ME LINE L1 -2269 5539 5254 562 265 133 27 chr10 34170732 34171026 -111418262 + MER46C DNA MER2_type 8 332 -6 473 256 6 44 chr10 34171058 34171218 -111418070 - L2 LINE L2 -956 2358 2205 2167 119 7 0 chr10 34172599 34172909 -111416379 + AluSx SINE Alu 1 312 0 273 128 0 0 chr10 34172909 34172948 -111416340 + MER50-int LTR ERV1 4315 4353 -3184 1379 110 0 6 chr10 34172949 34173131 -111416157 + AluSc SINE Alu 40 220 -89 670 97 97 0 chr10 34173173 34173276 -111416012 + AluSg/x SINE Alu 197 309 -3 2190 104 0 13 chr10 34173276 34173575 -111415713 + AluSg SINE Alu 1 295 -15 3734 129 32 32 chr10 34173575 34173746 -111415542 + MER50-int LTR ERV1 4612 4782 -1481 2349 119 0 0 chr10 34173746 34174056 -111415232 + AluSq SINE Alu 1 310 -3 3734 129 32 32 chr10 34174056 34174510 -111414778 + MER50-int LTR ERV1 4782 5192 -1071 1813 177 138 26 chr10 34174510 34174895 -111414393 - MSTA LTR MaLR 0 428 1 1339 152 18 13 chr10 34174937 34175161 -111414127 + AluSg/x SINE Alu 78 302 -10 9650 126 12 37 chr10 34175161 34176731 -111412557 - MSTA-int LTR MaLR -47 1533 3 1644 151 176 22 chr10 34176737 34177101 -111412187 - MSTA LTR MaLR -8 420 1 6153 121 9 30 chr10 34177102 34178085 -111411203 + MER50-int LTR ERV1 5243 6205 -1000 2652 85 17 3 chr10 34178079 34178432 -111410856 + MER50-int LTR ERV1 6840 7197 -8 * 3931 145 87 5 chr10 34178432 34179089 -111410199 + MER50 LTR ERV1 1 711 -23 1049 276 138 33 chr10 34179116 34179878 -111409410 - L1MEc LINE L1 -4718 1678 837 1043 209 43 8 chr10 34179873 34180107 -111409181 - L1MEc LINE L1 -6133 263 22 * 633 242 138 41 chr10 34180299 34180455 -111408833 - L1MC4 LINE L1 0 8042 7903 2264 92 0 7 chr10 34180455 34180750 -111408538 + AluSp SINE Alu 1 293 -20 633 242 138 41 chr10 34180750 34180950 -111408338 - L1MC4 LINE L1 -139 7903 7642 2432 59 0 16 chr10 34180950 34181257 -111408031 + AluY SINE Alu 1 302 -9 633 242 138 41 chr10 34181257 34181291 -111407997 - L1MC4 LINE L1 -400 7642 7613 654 222 5 7 chr10 34181311 34181516 -111407772 + MLT1A1 LTR MaLR 5 259 -106 886 157 0 63 chr10 34181538 34181697 -111407591 - FRAM SINE Alu -18 158 10 748 148 0 0 chr10 34181708 34181823 -111407465 + MLT1A1 LTR MaLR 245 359 -6 2338 100 0 13 chr10 34181838 34182148 -111407140 - AluSx SINE Alu -6 306 1 234 245 0 0 chr10 34182154 34182207 -111407081 - L1MC4 LINE L1 -444 7598 7546 28 48 0 0 chr10 34182216 34182258 -111407030 + AT_rich Low_complexity Low_complexity 1 42 0 809 200 0 0 chr10 34182258 34182383 -111406905 - FLAM_C SINE Alu -17 126 2 1809 150 37 10 chr10 34182712 34183006 -111406282 + AluJb SINE Alu 1 302 -10 1589 139 6 104 chr10 34184076 34184421 -111404867 + AluJb SINE Alu 1 311 -1 1643 98 5 0 chr10 34184422 34184636 -111404652 + AluSp SINE Alu 96 310 -3 2328 93 0 7 chr10 34185026 34185328 -111403960 + AluSp SINE Alu 1 300 -13 892 278 92 44 chr10 34185425 34185998 -111403290 - L1ME4a LINE L1 -220 5901 5301 916 133 0 22 chr10 34186537 34186672 -111402616 + FLAM_C SINE Alu 1 132 -1 644 184 64 0 chr10 34186811 34186936 -111402352 + FLAM_C SINE Alu 1 133 0 256 211 113 0 chr10 34186972 34187043 -111402245 + MIR SINE MIR 90 168 -94 406 269 20 67 chr10 34187189 34187338 -111401950 - MIR3 SINE MIR -7 201 60 965 88 0 22 chr10 34187556 34187692 -111401596 + AluSg/x SINE Alu 170 302 -10 1812 156 11 11 chr10 34187726 34188008 -111401280 - AluSx SINE Alu -21 291 10 544 287 32 6 chr10 34188046 34188203 -111401085 + MER34 LTR ERV1 97 257 -285 1721 129 129 4 chr10 34188203 34188328 -111400960 + AluSx SINE Alu 2 110 -202 216 0 0 0 chr10 34188328 34188352 -111400936 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1721 129 129 4 chr10 34188352 34188498 -111400790 + AluSx SINE Alu 110 307 -5 921 134 0 107 chr10 34188498 34188685 -111400603 + AluJb SINE Alu 137 303 -9 608 225 66 11 chr10 34188774 34188835 -111400453 + MER31-int LTR ERV1 1561 1617 -3254 1673 162 17 30 chr10 34188835 34189132 -111400156 + AluJb SINE Alu 1 293 -19 608 225 66 11 chr10 34189132 34189252 -111400036 + MER31-int LTR ERV1 1617 1752 -3119 1078 164 61 23 chr10 34189255 34189469 -111399819 + AluJo SINE Alu 85 306 -6 963 180 28 92 chr10 34189479 34189951 -111399337 + MER31-int LTR ERV1 1117 2104 -2767 470 207 39 101 chr10 34190016 34190224 -111399064 + MER31-int LTR ERV1 3548 3742 -2856 578 179 20 139 chr10 34190278 34190411 -111398877 + MER31-int LTR ERV1 3731 3822 -2776 1881 130 49 36 chr10 34190411 34190450 -111398838 - AluSx SINE Alu 0 312 275 213 39 0 0 chr10 34190450 34190476 -111398812 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 1881 130 49 36 chr10 34190476 34190744 -111398544 - AluSx SINE Alu -37 275 1 578 179 20 139 chr10 34190744 34190861 -111398427 + MER31-int LTR ERV1 3822 3951 -2647 2364 73 13 19 chr10 34190943 34191256 -111398032 - AluY SINE Alu 0 311 1 2290 99 17 0 chr10 34191258 34191550 -111397738 - AluSx SINE Alu -15 297 1 1782 179 3 3 chr10 34191552 34191848 -111397440 - AluJb SINE Alu -16 296 1 488 262 33 22 chr10 34191848 34192031 -111397257 + MER31-int LTR ERV1 2637 2821 -2115 421 209 96 17 chr10 34192034 34192149 -111397139 + MER65C LTR ERV1 338 461 0 431 248 22 44 chr10 34192473 34192610 -111396678 + L1ME4a LINE L1 4007 4140 -2006 387 197 102 22 chr10 34192928 34193065 -111396223 + LTR33 LTR ERVL 374 521 0 2106 120 3 3 chr10 34194686 34194986 -111394302 + AluSp SINE Alu 14 313 0 1844 164 13 0 chr10 34195008 34195306 -111393982 + AluSx SINE Alu 1 302 -10 862 139 0 36 chr10 34195633 34195770 -111393518 + FLAM_C SINE Alu 2 133 0 2208 93 0 14 chr10 34196346 34196636 -111392652 - AluSq SINE Alu -15 298 13 406 269 20 67 chr10 34196786 34196935 -111392353 + MIR3 SINE MIR 60 201 -7 256 211 113 0 chr10 34197081 34197152 -111392136 - MIR SINE MIR -94 168 90 644 184 64 0 chr10 34197188 34197313 -111391975 - FLAM_C SINE Alu 0 133 1 916 133 0 22 chr10 34197452 34197587 -111391701 - FLAM_C SINE Alu -1 132 1 892 278 92 44 chr10 34198126 34198699 -111390589 + L1ME4a LINE L1 5301 5901 -220 2315 96 0 7 chr10 34198796 34199098 -111390190 - AluSp SINE Alu -13 300 1 1654 98 5 0 chr10 34199485 34199700 -111389588 - AluSp SINE Alu -3 310 95 1603 136 6 104 chr10 34199700 34200045 -111389243 - AluJb SINE Alu -1 311 1 1809 150 37 10 chr10 34201115 34201409 -111387879 - AluJb SINE Alu -10 302 1 809 200 0 0 chr10 34201738 34201863 -111387425 + FLAM_C SINE Alu 2 126 -17 28 48 0 0 chr10 34201863 34201905 -111387383 + AT_rich Low_complexity Low_complexity 1 42 0 234 245 0 0 chr10 34201914 34201967 -111387321 + L1MC4 LINE L1 7546 7598 -444 2234 106 0 13 chr10 34201973 34202274 -111387014 + AluSx SINE Alu 1 297 -15 654 191 0 0 chr10 34202289 34202404 -111386884 - MLT1A1 LTR MaLR -6 359 245 876 163 0 62 chr10 34202414 34202574 -111386714 + FRAM SINE Alu 9 158 -18 654 222 5 7 chr10 34202596 34202801 -111386487 - MLT1A1 LTR MaLR -106 259 5 633 242 138 41 chr10 34202821 34202855 -111386433 + L1MC4 LINE L1 7613 7642 -400 2432 59 0 16 chr10 34202855 34203162 -111386126 - AluY SINE Alu -9 302 1 633 242 138 41 chr10 34203162 34203362 -111385926 + L1MC4 LINE L1 7642 7821 -221 2249 95 0 7 chr10 34203362 34203657 -111385631 - AluSp SINE Alu -20 293 1 633 242 138 41 chr10 34203657 34203813 -111385475 + L1MC4 LINE L1 7821 8042 0 1043 209 43 8 chr10 34204005 34204239 -111385049 + L1MEc LINE L1 22 263 -6133 * 1049 276 138 33 chr10 34204234 34204996 -111384292 + L1MEc LINE L1 837 1678 -4718 3942 143 87 5 chr10 34205023 34205680 -111383608 - MER50 LTR ERV1 -23 711 1 2652 85 17 3 chr10 34205680 34206033 -111383255 - MER50-int LTR ERV1 -8 7197 6840 * 6168 120 9 30 chr10 34206027 34207010 -111382278 - MER50-int LTR ERV1 -1000 6205 5243 1665 148 176 22 chr10 34207011 34207375 -111381913 + MSTA LTR MaLR 1 420 -8 9585 128 12 37 chr10 34207381 34208951 -111380337 + MSTA-int LTR MaLR 3 1533 -47 1339 152 18 13 chr10 34208951 34209175 -111380113 - AluSg/x SINE Alu -10 300 76 1813 177 138 26 chr10 34209217 34209602 -111379686 + MSTA LTR MaLR 1 428 0 3698 132 32 32 chr10 34209602 34210056 -111379232 - MER50-int LTR ERV1 -1071 5223 4782 2349 119 0 0 chr10 34210056 34210366 -111378922 - AluSq SINE Alu -3 310 1 3698 132 32 32 chr10 34210366 34210537 -111378751 - MER50-int LTR ERV1 -1512 4782 4612 2190 104 0 13 chr10 34210537 34210836 -111378452 - AluSg SINE Alu -15 295 1 670 97 97 0 chr10 34210836 34210939 -111378349 - AluSg/x SINE Alu -3 309 197 1411 104 0 6 chr10 34210981 34211163 -111378125 - AluSc SINE Alu -89 220 40 1604 156 19 13 chr10 34211164 34211216 -111378072 - MER50-int LTR ERV1 -1642 3656 3606 2108 136 0 0 chr10 34211216 34211511 -111377777 - AluSx SINE Alu -12 300 6 1604 156 19 13 chr10 34211511 34211761 -111377527 - MER50-int LTR ERV1 -1692 3606 2921 1038 98 8 0 chr10 34211761 34211893 -111377395 - AluSq/x SINE Alu -180 133 1 3413 129 18 20 chr10 34211893 34212539 -111376749 - MER50-int LTR ERV1 -804 4076 3391 2838 138 62 4 chr10 34212539 34212990 -111376298 - MER50-int LTR ERV1 -3399 1481 1005 6363 142 41 11 chr10 34213088 34213835 -111375453 - MER50-int LTR ERV1 -5355 1850 1126 2266 93 0 0 chr10 34213835 34214143 -111375145 - AluSg SINE Alu 0 308 1 6363 142 41 11 chr10 34214143 34215072 -111374216 - MER50-int LTR ERV1 -6079 1126 1 4372 133 21 29 chr10 34215155 34215226 -111374062 - MER50 LTR ERV1 -23 711 641 2350 112 0 0 chr10 34215226 34215531 -111373757 - AluSx SINE Alu -7 305 1 4372 133 21 29 chr10 34215531 34216176 -111373112 - MER50 LTR ERV1 -93 641 1 8101 161 35 1 chr10 34216185 34217492 -111371796 + L1M1 LINE L1 967 2318 -5247 1849 135 4 0 chr10 34217492 34217759 -111371529 + AluSx SINE Alu 1 268 -44 934 215 99 0 chr10 34217977 34218200 -111371088 + MIR SINE MIR 18 262 0 1674 181 10 24 chr10 34218330 34218622 -111370666 + AluJo SINE Alu 1 288 -24 2482 55 3 0 chr10 34218663 34218953 -111370335 + AluY SINE Alu 3 293 -18 746 142 67 8 chr10 34219190 34219310 -111369978 + FLAM_A SINE Alu 1 127 -6 660 286 16 5 chr10 34219321 34219513 -111369775 - MIR SINE MIR -10 252 59 1894 158 17 0 chr10 34219835 34220127 -111369161 - AluJb SINE Alu -15 297 1 378 0 0 0 chr10 34220247 34220289 -111368999 + (TG)n Simple_repeat Simple_repeat 2 43 0 354 180 0 155 chr10 34220291 34220358 -111368930 + MER20 DNA MER1_type 7 83 -136 1879 152 0 17 chr10 34220358 34220654 -111368634 - AluJb SINE Alu -21 291 1 354 180 0 155 chr10 34220654 34220754 -111368534 + MER20 DNA MER1_type 83 219 0 317 222 189 22 chr10 34220926 34221016 -111368272 - L2 LINE L2 -10 3303 3199 1850 137 7 31 chr10 34221063 34221355 -111367933 + AluSx SINE Alu 1 285 -27 414 0 0 0 chr10 34221361 34221407 -111367881 + (TAGA)n Simple_repeat Simple_repeat 1 46 0 239 104 83 0 chr10 34221415 34221463 -111367825 - LTR66 LTR ERVL -172 438 387 180 0 0 0 chr10 34222282 34222302 -111366986 + (CA)n Simple_repeat Simple_repeat 1 20 0 443 107 0 0 chr10 34222508 34222564 -111366724 + AluJ/FLAM SINE Alu 2 57 -255 2850 125 46 16 chr10 34222719 34223151 -111366137 - MER83 LTR ERV1 0 448 4 1684 157 7 11 chr10 34223151 34223431 -111365857 - AluJo SINE Alu -33 279 1 1154 146 0 0 chr10 34223521 34223685 -111365603 - AluSg/x SINE Alu -14 298 135 1050 189 0 0 chr10 34224082 34224246 -111365042 - FRAM SINE Alu -2 164 1 724 137 21 132 chr10 34224367 34224419 -111364869 + L1MA5A LINE L1 6126 6182 -115 2084 107 7 3 chr10 34224419 34224709 -111364579 + AluSq SINE Alu 1 291 -22 1615 151 75 0 chr10 34224713 34224826 -111364462 + AluJo SINE Alu 1 104 -208 378 42 0 0 chr10 34224826 34224874 -111364414 + (CA)n Simple_repeat Simple_repeat 1 48 0 1615 151 75 0 chr10 34224874 34225038 -111364250 + AluJo SINE Alu 104 299 -13 724 137 21 132 chr10 34225038 34225170 -111364118 + L1MA5A LINE L1 6185 6294 -3 2478 222 140 25 chr10 34225437 34226338 -111362950 + L1MEc LINE L1 36 1102 -5294 1697 179 0 3 chr10 34226338 34226628 -111362660 + AluJo SINE Alu 23 311 -1 2478 222 140 25 chr10 34226628 34226805 -111362483 + L1MEc LINE L1 1102 1257 -5139 2077 141 7 0 chr10 34227021 34227327 -111361961 + AluSx SINE Alu 1 308 -4 381 361 115 0 chr10 34227488 34227837 -111361451 - L2 LINE L2 -962 2352 1964 1736 174 4 4 chr10 34228672 34228953 -111360335 + AluJb SINE Alu 1 281 -31 5212 78 32 7 chr10 34228970 34229687 -111359601 - SVA Other Other -2 1384 650 450 136 0 0 chr10 34229694 34229760 -111359528 + Alu SINE Alu 235 300 -12 233 204 93 0 chr10 34230045 34230099 -111359189 - MLT1K LTR MaLR 0 588 530 1299 184 0 84 chr10 34230101 34230400 -111358888 + AluJb SINE Alu 1 274 -38 731 69 15 31 chr10 34230401 34230531 -111358757 + (TAGA)n Simple_repeat Simple_repeat 3 130 0 1224 228 73 93 chr10 34230569 34230644 -111358644 + MLT1F LTR MaLR 1 76 -466 3680 100 31 4 chr10 34230644 34231166 -111358122 - L1PA14 LINE L1 -2 6159 5624 1224 228 73 93 chr10 34231166 34231582 -111357706 + MLT1F LTR MaLR 76 482 -60 1890 144 0 7 chr10 34231592 34231876 -111357412 - AluJo SINE Alu -30 282 1 2505 68 0 0 chr10 34232068 34232364 -111356924 + AluY SINE Alu 2 297 -14 2645 43 0 0 chr10 34232919 34233220 -111356068 + AluY SINE Alu 1 301 -10 1736 153 14 14 chr10 34234265 34234581 -111354707 + AluJb SINE Alu 1 316 0 2302 100 0 0 chr10 34234877 34235168 -111354120 - AluY SINE Alu -20 291 1 771 146 9 0 chr10 34235364 34235474 -111353814 + FLAM_C SINE Alu 23 133 -10 591 238 0 8 chr10 34235706 34235828 -111353460 - L2 LINE L2 0 3313 3193 482 246 129 69 chr10 34235891 34235986 -111353302 + L1ME LINE L1 5420 5508 -613 1872 153 7 13 chr10 34235986 34236293 -111352995 - AluJb SINE Alu -5 307 3 482 246 129 69 chr10 34236293 34236429 -111352859 + L1ME LINE L1 5508 5665 -456 218 276 11 69 chr10 34236474 34236561 -111352727 + MIR SINE MIR 21 102 -160 605 273 24 18 chr10 34236573 34236738 -111352550 + MIR SINE MIR 81 246 -16 1526 163 37 41 chr10 34236945 34237239 -111352049 + AluJb SINE Alu 3 295 -17 6934 70 29 11 chr10 34237277 34238961 -111350327 + L1PA10 LINE L1 4429 6168 0 2371 103 0 0 chr10 34238967 34239277 -111350011 + AluSx SINE Alu 1 310 -2 343 282 32 8 chr10 34239702 34239826 -111349462 + LTR67 LTR ERVL 429 555 -2 2241 112 0 7 chr10 34240092 34240397 -111348891 - AluSx SINE Alu -9 303 1 1575 158 10 59 chr10 34241105 34241409 -111347879 + AluJo SINE Alu 1 289 -23 233 242 185 70 chr10 34241429 34241497 -111347791 - MER5A DNA MER1_type -6 183 124 2292 224 66 35 chr10 34241497 34242073 -111347215 - MLT1G1 LTR MaLR 0 595 2 233 242 185 70 chr10 34242073 34242161 -111347127 - MER5A DNA MER1_type -65 124 9 2016 154 19 0 chr10 34242387 34242699 -111346589 - 7SLRNA srpRNA srpRNA -2 318 1 250 276 68 98 chr10 34243058 34243221 -111346067 - L2 LINE L2 -1 3312 3155 356 230 14 14 chr10 34243224 34243298 -111345990 + Charlie1 DNA MER1_type 7 80 -2681 * 2210 189 74 4 chr10 34243280 34243809 -111345479 + Charlie1 DNA MER1_type 2132 2697 -64 1877 56 0 4 chr10 34243861 34244092 -111345196 + LTR9 LTR ERV1 1 230 -382 464 92 0 53 chr10 34244092 34244168 -111345120 + FLAM_A SINE Alu 68 139 -3 606 226 0 16 chr10 34244827 34244951 -111344337 + L2 LINE L2 3185 3306 -7 590 287 69 53 chr10 34244985 34245316 -111343972 - L2 LINE L2 -253 3060 2709 4002 160 28 35 chr10 34245316 34246009 -111343279 + L1MB3 LINE L1 5444 6133 -50 2408 89 0 0 chr10 34246009 34246312 -111342976 + AluSx SINE Alu 7 309 -3 4002 160 28 35 chr10 34246312 34246360 -111342928 + L1MB3 LINE L1 6133 6180 -3 590 287 69 53 chr10 34246360 34246425 -111342863 - L2 LINE L2 -604 2709 2647 2011 151 3 0 chr10 34246622 34246921 -111342367 + AluJb SINE Alu 1 300 -12 1189 192 129 33 chr10 34246978 34247220 -111342068 + Charlie1 DNA MER1_type 2346 2630 -131 2242 121 0 3 chr10 34247220 34247527 -111341761 - AluSg SINE Alu -4 306 1 1189 192 129 33 chr10 34247527 34247617 -111341671 + Charlie1 DNA MER1_type 2630 2710 -51 817 149 91 26 chr10 34247623 34247777 -111341511 - FRAM SINE Alu -21 155 1 485 206 19 0 chr10 34247827 34247934 -111341354 + MLT1L LTR MaLR 165 273 -342 442 259 38 71 chr10 34248063 34248214 -111341074 - L1ME LINE L1 -381 5740 5596 2379 92 0 0 chr10 34248214 34248509 -111340779 + AluSp SINE Alu 1 295 -18 442 259 38 71 chr10 34248509 34248569 -111340719 - L1ME LINE L1 -525 5596 5536 224 206 0 73 chr10 34248576 34248644 -111340644 - MIR SINE MIR -5 257 195 434 268 100 28 chr10 34248645 34248910 -111340378 - L1ME LINE L1 -770 5376 5236 549 269 133 27 chr10 34248924 34249218 -111340070 + MER46C DNA MER2_type 8 332 -6 473 256 6 44 chr10 34249250 34249410 -111339878 - L2 LINE L2 -956 2358 2205 341 76 0 136 chr10 34250757 34250791 -111338497 + L1MB2 LINE L1 6093 6115 -56 2124 103 21 0 chr10 34250791 34251081 -111338207 + AluSx SINE Alu 1 296 -16 341 76 0 136 chr10 34251081 34251112 -111338176 + L1MB2 LINE L1 6115 6149 -22 920 191 0 0 chr10 34251112 34251259 -111338029 - AluJb SINE Alu -29 283 137 465 117 13 52 chr10 34251260 34251337 -111337951 + MER2 DNA MER2_type 272 345 0 1122 236 220 24 chr10 34251379 34251929 -111337359 - HAL1 LINE L1 -36 2471 1814 314 213 120 13 chr10 34251945 34252020 -111337268 - HAL1 LINE L1 -766 1741 1659 1757 124 4 4 chr10 34252023 34252272 -111337016 + AluSx SINE Alu 1 249 -63 485 243 167 36 chr10 34252371 34252593 -111336695 - HAL1 LINE L1 -925 1582 1332 1489 230 201 15 chr10 34252602 34253189 -111336099 - HAL1 LINE L1 -1232 1275 580 1611 101 0 9 chr10 34253209 34253427 -111335861 + AluSx SINE Alu 1 216 -96 701 136 136 71 chr10 34253428 34253568 -111335720 + AluSc SINE Alu 150 298 -11 609 251 291 22 chr10 34253568 34253939 -111335349 - HAL1 LINE L1 -839 1668 1198 1334 149 5 0 chr10 34253982 34254197 -111335091 + AluSq SINE Alu 85 300 -13 245 264 153 18 chr10 34254762 34254925 -111334363 - LTR41 LTR ERVL -542 231 47 958 173 162 108 chr10 34254925 34255203 -111334085 - MLT1C LTR MaLR 0 467 98 665 281 64 42 chr10 34255211 34255661 -111333627 + MERVL LTR ERVL 1787 2256 -2740 253 283 50 0 chr10 34255669 34255768 -111333520 + MERVL LTR ERVL 3957 4060 -1425 374 172 0 0 chr10 34256103 34256161 -111333127 + AluJ/FRAM SINE Alu 233 290 -12 1500 174 39 7 chr10 34256164 34256445 -111332843 + AluJb SINE Alu 1 290 -22 2243 90 10 3 chr10 34256459 34256760 -111332528 + AluSp SINE Alu 1 303 -10 1796 158 6 64 chr10 34256768 34257096 -111332192 + AluSx SINE Alu 1 309 -3 810 206 121 106 chr10 34257390 34257901 -111331387 + L1MC5 LINE L1 6961 7479 -482 713 201 79 98 chr10 34257970 34258080 -111331208 + L1MC5 LINE L1 7625 7736 -225 2403 57 3 35 chr10 34258080 34258394 -111330894 + AluY SINE Alu 7 310 -1 713 201 79 98 chr10 34258394 34258601 -111330687 + L1MC5 LINE L1 7736 7936 -25 2269 124 0 0 chr10 34258800 34259107 -111330181 + AluSx SINE Alu 1 307 -5 41 21 0 0 chr10 34260229 34260277 -111329011 + AT_rich Low_complexity Low_complexity 1 48 0 1854 98 0 12 chr10 34262485 34262741 -111326547 + AluSq SINE Alu 2 254 -59 2325 84 7 0 chr10 34263193 34263492 -111325796 - AluSp SINE Alu -12 301 1 276 258 167 28 chr10 34263748 34264000 -111325288 + L1MC4 LINE L1 7536 7822 -220 1138 113 12 0 chr10 34264524 34264684 -111324604 + AluSp SINE Alu 122 283 -30 204 40 0 0 chr10 34264838 34264863 -111324425 + (GA)n Simple_repeat Simple_repeat 2 26 0 471 194 83 0 chr10 34264991 34265099 -111324189 + L1ME LINE L1 5548 5664 -457 2289 98 10 7 chr10 34265133 34265440 -111323848 + AluSq SINE Alu 1 308 -5 1688 184 3 7 chr10 34266152 34266467 -111322821 + AluJb SINE Alu 1 314 0 2322 94 10 0 chr10 34266469 34266778 -111322510 + AluSp SINE Alu 1 312 -1 1862 102 24 54 chr10 34266811 34267128 -111322160 - AluSx SINE Alu 0 308 1 24 0 0 0 chr10 34269014 34269038 -111320250 + AT_rich Low_complexity Low_complexity 1 24 0 1185 180 27 9 chr10 34269060 34269282 -111320006 - AluJb SINE Alu -78 234 9 22 0 0 0 chr10 34269408 34269430 -111319858 + AT_rich Low_complexity Low_complexity 1 22 0 1508 163 39 25 chr10 34270738 34271020 -111318268 - AluJo SINE Alu -26 286 1 1899 145 0 3 chr10 34271990 34272287 -111317001 + AluY SINE Alu 4 299 -12 22 35 0 0 chr10 34273400 34273429 -111315859 + AT_rich Low_complexity Low_complexity 1 29 0 1674 225 77 31 chr10 34273824 34274437 -111314851 + L1MC3 LINE L1 4629 5274 -872 2820 10 0 0 chr10 34274437 34274742 -111314546 - AluYa5 SINE Alu -6 305 1 1674 225 77 31 chr10 34274742 34274767 -111314521 + L1MC3 LINE L1 5274 5296 -850 2213 109 0 3 chr10 34274770 34275072 -111314216 + AluSx SINE Alu 1 301 -11 2184 130 0 13 chr10 34275083 34275398 -111313890 + AluSx SINE Alu 1 311 -1 2550 178 77 48 chr10 34275401 34275673 -111313615 + L1MC3 LINE L1 5417 5680 -2105 1981 158 0 0 chr10 34275673 34275964 -111313324 - AluSx SINE Alu -21 291 1 2550 178 77 48 chr10 34275964 34276382 -111312906 + L1MC3 LINE L1 5680 6127 -1658 2371 90 0 13 chr10 34276441 34276753 -111312535 + AluY SINE Alu 1 308 -3 181 195 98 0 chr10 34276906 34276947 -111312341 + MIR SINE MIR 33 77 -131 225 156 94 0 chr10 34277755 34277819 -111311469 + L1MC5 LINE L1 7868 7937 -24 1580 167 73 31 chr10 34277907 34278195 -111311093 - AluJb SINE Alu -12 300 1 1326 147 44 0 chr10 34278268 34278472 -111310816 - AluJb SINE Alu -15 297 85 192 202 128 32 chr10 34278550 34278644 -111310644 + MIR SINE MIR 110 212 -50 765 169 52 0 chr10 34279521 34279657 -111309631 + MER46A DNA MER2_type 34 176 -60 2381 74 7 0 chr10 34280527 34280825 -111308463 + AluSq SINE Alu 2 301 -12 221 257 14 95 chr10 34280830 34280904 -111308384 - L2 LINE L2 -19 3294 3227 22 0 0 0 chr10 34281097 34281119 -111308169 + AT_rich Low_complexity Low_complexity 1 22 0 282 341 109 31 chr10 34281694 34281923 -111307365 - L2 LINE L2 0 3272 3026 2339 73 7 7 chr10 34282009 34282309 -111306979 + AluSq SINE Alu 1 300 -13 2355 87 0 0 chr10 34282373 34282672 -111306616 + AluSq SINE Alu 1 299 -14 372 236 101 0 chr10 34282773 34282907 -111306381 + MER20 DNA MER1_type 46 202 -17 1779 155 56 9 chr10 34283928 34284250 -111305038 + MER1B DNA MER1_type 1 337 0 488 173 119 38 chr10 34284752 34284768 -111304520 - L1M3f LINE L1 -4097 1527 1514 2155 120 0 3 chr10 34284768 34285068 -111304220 - AluSx SINE Alu -13 299 1 488 173 119 38 chr10 34285068 34285290 -111303998 - L1M3f LINE L1 -4110 1514 1018 195 42 0 0 chr10 34286439 34286463 -111302825 + (TC)n Simple_repeat Simple_repeat 1 24 0 22 35 0 0 chr10 34287041 34287070 -111302218 + AT_rich Low_complexity Low_complexity 1 29 0 1124 126 0 0 chr10 34287083 34287242 -111302046 - AluSg/x SINE Alu -19 291 133 1397 115 5 0 chr10 34288293 34288484 -111300804 + AluSg/x SINE Alu 88 279 -33 2414 67 0 0 chr10 34288497 34288780 -111300508 + AluSg SINE Alu 13 295 -15 365 258 44 88 chr10 34289063 34289222 -111300066 - MIR3 SINE MIR -34 174 23 198 220 286 0 chr10 34289538 34289629 -111299659 - L2 LINE L2 -22 3291 3175 360 0 0 0 chr10 34291282 34291322 -111297966 + (CA)n Simple_repeat Simple_repeat 2 41 0 2206 96 17 3 chr10 34291377 34291670 -111297618 + AluSg SINE Alu 1 297 -13 1021 138 0 0 chr10 34291683 34291828 -111297460 + AluSg/x SINE Alu 156 300 -12 1301 167 38 52 chr10 34292307 34292594 -111296694 - AluJo SINE Alu -29 283 1 218 231 58 0 chr10 34293234 34293286 -111296002 + L2 LINE L2 3210 3264 -8 943 208 47 63 chr10 34293562 34293658 -111295630 - MIR SINE MIR -7 255 159 2213 84 3 52 chr10 34293658 34293967 -111295321 - AluSx SINE Alu -18 294 1 943 208 47 63 chr10 34293967 34294125 -111295163 - MIR SINE MIR -103 159 5 2242 88 0 23 chr10 34295052 34295359 -111293929 + AluSp SINE Alu 2 301 -12 577 231 15 15 chr10 34295420 34295550 -111293738 - MIR SINE MIR -118 144 15 414 347 164 45 chr10 34296334 34297000 -111292288 + L3 LINE CR1 325 1069 -508 601 259 33 61 chr10 34297024 34297236 -111292052 + L2 LINE L2 556 761 -2553 853 127 14 42 chr10 34297237 34297379 -111291909 - FLAM_C SINE Alu -5 138 1 1179 259 267 16 chr10 34297393 34297476 -111291812 + L2 LINE L2 772 833 -2481 2132 146 14 27 chr10 34297476 34297846 -111291442 - MER47A DNA MER2_type -1 365 1 1179 259 267 16 chr10 34297846 34298406 -111290882 + L2 LINE L2 833 1577 -1737 308 343 35 21 chr10 34298404 34298547 -111290741 + L3 LINE CR1 1327 1471 -106 * 234 258 106 0 chr10 34299379 34299445 -111289843 + L2 LINE L2 3187 3259 -54 1473 144 156 4 chr10 34299534 34299790 -111289498 - AluJb SINE Alu -7 295 1 182 310 224 0 chr10 34299808 34299924 -111289364 - L2 LINE L2 0 3313 3172 323 237 175 0 chr10 34300246 34300360 -111288928 - Charlie1a DNA MER1_type -1320 135 2 290 235 126 34 chr10 34300365 34300484 -111288804 - L2 LINE L2 -1235 2079 1950 316 219 288 19 chr10 34301123 34301328 -111287960 + MLT1L LTR MaLR 354 613 -2 1378 117 0 0 chr10 34301839 34302019 -111287269 - AluSx SINE Alu -132 180 1 2288 83 3 29 chr10 34304102 34304416 -111284872 + AluSq SINE Alu 1 306 -7 198 71 0 0 chr10 34306180 34306208 -111283080 + (CA)n Simple_repeat Simple_repeat 1 28 0 189 0 0 0 chr10 34306860 34306881 -111282407 + (CGG)n Simple_repeat Simple_repeat 2 22 0 472 141 87 0 chr10 34307405 34307497 -111281791 + HY3 scRNA scRNA 1 100 -1 188 290 43 65 chr10 34308097 34308168 -111281120 + MIR3 SINE MIR 103 173 -35 2734 198 54 14 chr10 34308168 34308660 -111280628 - LTR65 LTR ERV1 0 669 143 1887 141 36 20 chr10 34308660 34308965 -111280323 + AluJo SINE Alu 1 310 -2 2734 198 54 14 chr10 34308965 34309115 -111280173 - LTR65 LTR ERV1 -526 143 1 188 290 43 65 chr10 34309115 34309136 -111280152 + MIR3 SINE MIR 173 193 -15 2623 188 28 17 chr10 34309414 34309951 -111279337 - MER67A LTR ERV1 0 543 1 614 308 84 15 chr10 34309969 34310242 -111279046 - MER102b DNA MER1_type -49 292 1 197 329 118 40 chr10 34310324 34310628 -111278660 + L2 LINE L2 2243 2570 -744 1930 165 0 3 chr10 34310898 34311207 -111278081 + AluSx SINE Alu 1 308 -4 2417 93 0 0 chr10 34311626 34311928 -111277360 + AluSq SINE Alu 1 302 -11 1993 222 43 17 chr10 34311989 34312457 -111276831 + MLT1H1 LTR MaLR 66 545 -10 21 0 0 0 chr10 34312552 34312573 -111276715 + AT_rich Low_complexity Low_complexity 1 21 0 291 309 21 11 chr10 34312871 34312965 -111276323 - L2 LINE L2 -7 3306 3212 216 0 0 0 chr10 34313385 34313409 -111275879 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 2215 110 3 0 chr10 34313413 34313705 -111275583 - AluSx SINE Alu -19 293 1 770 188 0 16 chr10 34313708 34313836 -111275452 - FLAM_A SINE Alu -7 126 1 1114 216 120 22 chr10 34313872 34314380 -111274908 - HAL1 LINE L1 -6 2501 1944 249 124 361 10 chr10 34314372 34314469 -111274819 - HAL1 LINE L1 -950 1557 1427 * 265 182 11 23 chr10 34314482 34314570 -111274718 - HAL1 LINE L1 -1320 1187 1101 315 0 0 0 chr10 34314574 34314609 -111274679 + (TG)n Simple_repeat Simple_repeat 2 36 0 1800 183 0 10 chr10 34314636 34314936 -111274352 + AluJb SINE Alu 1 297 -15 360 0 0 0 chr10 34314969 34315009 -111274279 + (TG)n Simple_repeat Simple_repeat 2 41 0 2149 112 3 0 chr10 34315109 34315396 -111273892 - AluSp SINE Alu -24 289 2 317 323 39 35 chr10 34315396 34315628 -111273660 - HAL1 LINE L1 -1569 938 706 2205 132 0 3 chr10 34315628 34315939 -111273349 - AluSx SINE Alu -2 310 1 3424 135 20 26 chr10 34315940 34316583 -111272705 - L1 LINE L1 -954 5192 4554 883 330 66 17 chr10 34316602 34317171 -111272117 - HAL1 LINE L1 -1817 690 84 1849 152 3 37 chr10 34317171 34317493 -111271795 - AluSx SINE Alu -1 311 1 883 330 66 17 chr10 34317493 34317572 -111271716 - HAL1 LINE L1 -2423 84 10 221 292 133 26 chr10 34317600 34317713 -111271575 + L2 LINE L2 3170 3294 -19 1947 174 0 0 chr10 34318044 34318349 -111270939 - AluJo SINE Alu -6 306 2 1065 117 0 0 chr10 34318576 34318721 -111270567 - AluSx SINE Alu 0 310 166 546 136 0 0 chr10 34318721 34318802 -111270486 - AluSx SINE Alu -232 81 1 1799 109 68 4 chr10 34318946 34319256 -111270032 - AluSg SINE Alu 0 327 1 315 227 134 17 chr10 34319378 34319497 -111269791 - LTR16A LTR ERVL -110 340 208 2256 99 16 0 chr10 34319708 34320011 -111269277 - AluSq SINE Alu -5 308 1 2450 76 3 0 chr10 34320237 34320540 -111268748 - AluSp SINE Alu -9 304 1 1777 168 7 20 chr10 34320541 34320709 -111268579 - AluJo SINE Alu -19 293 129 2373 87 3 0 chr10 34320709 34321007 -111268281 - AluSx SINE Alu -13 299 1 1777 168 7 20 chr10 34321007 34321135 -111268153 - AluJo SINE Alu -183 129 1 202 149 54 14 chr10 34324186 34324260 -111265028 + (TA)n Simple_repeat Simple_repeat 2 78 0 303 287 108 31 chr10 34324656 34324785 -111264503 - L2 LINE L2 -1 3312 3174 2229 94 0 17 chr10 34325866 34326165 -111263123 + AluSg SINE Alu 1 294 -16 234 200 0 0 chr10 34326169 34326214 -111263074 + MIR SINE MIR 218 262 0 661 186 39 16 chr10 34326322 34326451 -111262837 + FLAM_C SINE Alu 2 133 -10 1582 122 26 86 chr10 34326736 34327063 -111262225 - AluJo SINE Alu 0 309 1 2320 214 78 24 chr10 34327092 34327556 -111261732 + MER21B LTR ERV1 151 650 -213 1748 94 124 15 chr10 34327556 34327821 -111261467 + AluSg1 SINE Alu 5 298 -11 2320 214 78 24 chr10 34327821 34327897 -111261391 + MER21B LTR ERV1 650 720 -143 2201 117 0 0 chr10 34327904 34328194 -111261094 + AluSx SINE Alu 11 300 -12 428 165 0 0 chr10 34328212 34328291 -111260997 - Alu SINE Alu 0 312 234 856 118 0 8 chr10 34328293 34328412 -111260876 + FLAM_C SINE Alu 14 131 -12 2340 120 0 0 chr10 34329049 34329358 -111259930 + AluSc SINE Alu 1 309 0 1919 168 0 7 chr10 34329562 34329871 -111259417 + AluJo SINE Alu 1 307 -5 4638 183 57 37 chr10 34330343 34330395 -111258893 - Tigger6a DNA MER2_type -514 1083 1034 1982 125 14 0 chr10 34330395 34330699 -111258589 + AluSx SINE Alu 1 308 0 4638 183 57 37 chr10 34330699 34330999 -111258289 - Tigger6a DNA MER2_type -563 1034 741 2170 114 31 0 chr10 34330999 34331288 -111258000 - AluSx SINE Alu -14 298 1 4638 183 57 37 chr10 34331288 34331518 -111257770 - Tigger6a DNA MER2_type -856 741 517 2010 154 0 3 chr10 34331518 34331817 -111257471 - AluSx SINE Alu -13 299 2 4638 183 57 37 chr10 34331817 34332293 -111256995 - Tigger6a DNA MER2_type -1080 517 1 2072 121 3 3 chr10 34332957 34333254 -111256034 + AluSq SINE Alu 1 297 -16 288 149 21 0 chr10 34333392 34333439 -111255849 - MER66B LTR ERV1 -141 345 298 1481 156 0 9 chr10 34334174 34334405 -111254883 + AluJb SINE Alu 1 229 -83 2088 129 7 7 chr10 34334405 34334714 -111254574 - AluSx SINE Alu -3 309 1 496 163 0 0 chr10 34334714 34334800 -111254488 + AluJb SINE Alu 221 306 -6 911 294 96 14 chr10 34334921 34335350 -111253938 + LTR16B LTR ERVL 1 464 0 2435 103 0 0 chr10 34335537 34335839 -111253449 + AluSq SINE Alu 1 302 -11 1654 172 14 4 chr10 34335967 34336246 -111253042 - AluJo SINE Alu -26 286 5 296 318 18 18 chr10 34336303 34336413 -111252875 + MER5A DNA MER1_type 80 189 0 2148 122 7 10 chr10 34336658 34336962 -111252326 + AluSx SINE Alu 1 303 -9 586 147 0 8 chr10 34337202 34337414 -111251874 + AluJo SINE Alu 3 274 -38 13144 194 24 26 chr10 34337798 34338348 -111250940 - L1PA16 LINE L1 -3 6163 5614 2403 90 0 0 chr10 34338348 34338649 -111250639 - AluY SINE Alu -10 301 1 13144 194 24 26 chr10 34338649 34338787 -111250501 - L1PA16 LINE L1 -552 5614 5477 2366 98 0 0 chr10 34338787 34339084 -111250204 + AluSq SINE Alu 1 297 -16 13144 194 24 26 chr10 34339084 34342385 -111246903 - L1PA16 LINE L1 -689 5477 2187 2516 66 0 3 chr10 34342385 34342686 -111246602 - AluSp SINE Alu -13 300 1 13144 194 24 26 chr10 34342686 34342744 -111246544 - L1PA16 LINE L1 -3979 2187 2130 2248 110 0 0 chr10 34342786 34343076 -111246212 - AluSg SINE Alu -20 290 1 2280 83 3 29 chr10 34343078 34343391 -111245897 - AluY SINE Alu -6 305 1 2311 110 0 3 chr10 34343536 34343846 -111245442 - AluSg SINE Alu -1 309 1 213 182 136 30 chr10 34344490 34344556 -111244732 - L2 LINE L2 -2 3311 3239 402 329 167 13 chr10 34344654 34345174 -111244114 - L2 LINE L2 -211 3061 2454 773 144 29 69 chr10 34345207 34345326 -111243962 - MER96B DNA MER1_type? -10 407 296 2066 115 56 0 chr10 34345326 34345614 -111243674 + AluSg SINE Alu 1 304 -6 773 144 29 69 chr10 34345614 34345667 -111243621 - MER96B DNA MER1_type? -121 296 242 327 261 52 30 chr10 34345691 34345825 -111243463 - MIR SINE MIR -66 196 60 925 229 0 0 chr10 34346089 34346255 -111243033 + FRAM SINE Alu 1 166 0 1995 142 78 26 chr10 34346514 34346860 -111242428 + THE1B LTR MaLR 1 364 0 1747 144 0 0 chr10 34346993 34347236 -111242052 - AluSx SINE Alu -15 297 55 2141 124 40 32 chr10 34348116 34348488 -111240800 - THE1C LTR MaLR 0 375 1 11159 100 8 34 chr10 34348488 34350110 -111239178 - THE1C-int LTR MaLR 0 1580 1 2251 116 19 26 chr10 34350110 34350488 -111238800 - THE1C LTR MaLR 0 375 1 21 0 0 0 chr10 34350869 34350890 -111238398 + AT_rich Low_complexity Low_complexity 1 21 0 760 200 0 67 chr10 34351183 34351220 -111238068 + FRAM SINE Alu 1 39 -273 2726 78 19 0 chr10 34351220 34351581 -111237707 - L1PA8 LINE L1 0 6172 5805 760 200 0 67 chr10 34351581 34351723 -111237565 + FRAM SINE Alu 39 168 -8 390 308 38 11 chr10 34352361 34352546 -111236742 - L1MC4 LINE L1 -1073 6969 6780 2177 148 35 83 chr10 34353973 34354142 -111235146 - MSTB2 LTR MaLR 0 457 281 2104 135 3 10 chr10 34354142 34354453 -111234835 + AluSx SINE Alu 1 309 -3 2177 148 35 83 chr10 34354453 34354763 -111234525 - MSTB2 LTR MaLR -176 281 1 205 200 0 0 chr10 34355871 34355911 -111233377 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 2066 123 24 0 chr10 34356274 34356566 -111232722 + AluSq SINE Alu 1 299 -14 337 291 61 20 chr10 34356687 34356835 -111232453 - MIR SINE MIR -50 212 59 1487 141 77 0 chr10 34356915 34357163 -111232125 + AluJb SINE Alu 1 267 -45 656 264 40 17 chr10 34357180 34357354 -111231934 + MER45A DNA AcHobo 1 178 0 337 80 0 20 chr10 34357587 34357637 -111231651 - MADE1 DNA Mariner -31 49 1 1751 174 10 13 chr10 34357754 34358052 -111231236 - AluJo SINE Alu -15 297 1 266 274 91 69 chr10 34358279 34358454 -111230834 + MER68 LTR ERV1 353 531 -31 2313 81 0 0 chr10 34358630 34358914 -111230374 + AluY SINE Alu 5 288 -23 560 288 72 46 chr10 34359173 34359508 -111229780 + L1MC4a LINE L1 5489 5740 -422 2241 106 0 10 chr10 34359508 34359810 -111229478 + AluSx SINE Alu 1 299 -13 560 288 72 46 chr10 34359810 34359832 -111229456 + L1MC4a LINE L1 5740 5760 -402 343 257 28 0 chr10 34361695 34361804 -111227484 - L1MA5 LINE L1 -443 5857 5746 * 360 283 9 0 chr10 34361802 34361915 -111227373 - L1MA5 LINE L1 -441 5859 5746 531 154 77 26 chr10 34361917 34362034 -111227254 - L1MA5A LINE L1 -440 5857 5735 2055 129 3 3 chr10 34363206 34363501 -111225787 + AluJb SINE Alu 1 295 -17 33 90 0 0 chr10 34363534 34363623 -111225665 + AT_rich Low_complexity Low_complexity 1 89 0 926 157 59 7 chr10 34364042 34364195 -111225093 - FAM SINE Alu -14 171 11 822 175 165 48 chr10 34364271 34364580 -111224708 + L1MC5 LINE L1 7582 7926 -35 2321 100 0 23 chr10 34364809 34365118 -111224170 - AluSg SINE Alu -8 302 1 180 111 0 0 chr10 34365453 34365480 -111223808 + (TTTTC)n Simple_repeat Simple_repeat 2 28 0 25 51 0 0 chr10 34365550 34365589 -111223699 + AT_rich Low_complexity Low_complexity 1 39 0 1193 57 0 6 chr10 34365903 34366062 -111223226 + (TTC)n Simple_repeat Simple_repeat 2 159 0 1445 28 0 6 chr10 34366111 34366290 -111222998 + (TTC)n Simple_repeat Simple_repeat 3 180 0 627 159 0 0 chr10 34366291 34366404 -111222884 + CT-rich Low_complexity Low_complexity 3 115 0 703 231 25 6 chr10 34366409 34366569 -111222719 - FRAM SINE Alu -8 168 6 2015 141 31 0 chr10 34367108 34367399 -111221889 + AluJb SINE Alu 1 300 -12 2168 130 3 13 chr10 34367807 34368123 -111221165 + AluSp SINE Alu 1 313 0 1672 154 41 4 chr10 34368472 34368738 -111220550 - AluJo SINE Alu -36 276 1 21 36 0 0 chr10 34368762 34368790 -111220498 + AT_rich Low_complexity Low_complexity 1 28 0 2113 121 10 0 chr10 34369120 34369409 -111219879 + AluSx SINE Alu 1 292 -20 3374 73 0 0 chr10 34369954 34370377 -111218911 + L1PA8 LINE L1 5746 6168 -4 834 161 0 7 chr10 34371102 34371239 -111218049 - AluJo SINE Alu -176 136 1 1121 140 68 110 chr10 34371315 34371579 -111217709 + LTR26B LTR ERV1 1 253 -278 978 196 12 0 chr10 34371576 34371739 -111217549 + LTR26B LTR ERV1 367 531 0 * 5144 188 45 17 chr10 34372281 34373857 -111215431 - MER52A LTR ERV1 0 1755 1 247 234 0 52 chr10 34374071 34374119 -111215169 + MLT1K LTR MaLR 513 557 -31 2405 126 27 30 chr10 34374119 34374499 -111214789 + MER57A LTR ERV1 1 381 -22 2006 161 0 0 chr10 34374499 34374809 -111214479 - AluSx SINE Alu -2 310 1 2405 126 27 30 chr10 34374809 34374832 -111214456 + MER57A LTR ERV1 381 403 0 247 234 0 52 chr10 34374832 34374860 -111214428 + MLT1K LTR MaLR 557 585 -3 2163 108 3 6 chr10 34374862 34375176 -111214112 + AluSp SINE Alu 1 313 0 1978 121 0 26 chr10 34375477 34375784 -111213504 - AluSg SINE Alu -11 299 1 1536 155 86 17 chr10 34376372 34376662 -111212626 + AluJo SINE Alu 3 312 0 716 124 0 0 chr10 34376688 34376801 -111212487 + L1MA5A LINE L1 6185 6297 0 2208 108 0 0 chr10 34376898 34377203 -111212085 + AluSg SINE Alu 1 305 -5 3313 145 97 26 chr10 34377470 34377748 -111211540 - LTR51 LTR ERV1 0 671 414 2003 122 0 10 chr10 34377748 34378072 -111211216 + AluSg SINE Alu 1 310 0 3313 145 97 26 chr10 34378072 34378419 -111210869 - LTR51 LTR ERV1 -257 414 1 2149 86 4 0 chr10 34378507 34378818 -111210470 + AluSg SINE Alu 1 312 0 1868 154 10 0 chr10 34379716 34380022 -111209266 - AluJo SINE Alu -1 311 3 1466 110 169 12 chr10 34380580 34380834 -111208454 + AluSg1 SINE Alu 1 294 -15 2437 63 0 0 chr10 34380965 34381264 -111208024 - AluY SINE Alu -12 299 1 480 212 229 0 chr10 34381780 34381950 -111207338 - MER3 DNA MER1_type 0 209 1 353 250 221 15 chr10 34381972 34382108 -111207180 + MER5A DNA MER1_type 26 189 0 2792 114 17 60 chr10 34382124 34382745 -111206543 + MER4E LTR ERV1 1 766 0 489 143 24 0 chr10 34382872 34382956 -111206332 + LTR56 LTR ERV1 1 86 -359 2337 101 116 11 chr10 34382956 34383352 -111205936 - MER61C LTR ERV1 0 434 13 1910 107 39 0 chr10 34383351 34383631 -111205657 + LTR56 LTR ERV1 81 371 -74 * 636 237 13 7 chr10 34383750 34383902 -111205386 - MIR SINE MIR -10 252 100 794 181 0 0 chr10 34383914 34384047 -111205241 + FLAM_C SINE Alu 1 133 0 596 117 53 11 chr10 34384104 34384198 -111205090 + MER4A LTR ERV1 1 98 -566 527 118 51 41 chr10 34384198 34384334 -111204954 + MER4A LTR ERV1 261 456 -208 1230 175 190 33 chr10 34384337 34384726 -111204562 - LTR7 LTR ERV1 0 450 1 3886 97 5 9 chr10 34384726 34385285 -111204003 - HERVH LTR ERV1 0 7713 7157 1635 142 0 0 chr10 34385278 34385539 -111203749 - HERVH LTR ERV1 -1697 6016 5756 * 4221 146 7 9 chr10 34385529 34386795 -111202493 - HERVH LTR ERV1 -2735 4258 3357 7906 123 4 29 chr10 34386803 34388052 -111201236 - HERVH LTR ERV1 -4899 2814 1597 397 219 11 64 chr10 34388155 34388397 -111200891 + G-rich Low_complexity Low_complexity 1 229 0 332 331 0 0 chr10 34388420 34388559 -111200729 + G-rich Low_complexity Low_complexity 1 139 0 1258 100 37 0 chr10 34388559 34388749 -111200539 + AluSp SINE Alu 109 305 -8 4767 175 53 45 chr10 34388749 34388887 -111200401 + L1MB3 LINE L1 4239 4374 -1809 2043 81 0 57 chr10 34388887 34389225 -111200063 - AluSc SINE Alu 0 321 1 4767 175 53 45 chr10 34389225 34389539 -111199749 + L1MB3 LINE L1 4374 4684 -1499 2142 109 0 0 chr10 34389539 34389832 -111199456 - AluSg SINE Alu -17 293 1 4767 175 53 45 chr10 34389832 34391326 -111197962 + L1MB3 LINE L1 4684 6183 0 27 0 0 0 chr10 34391450 34391477 -111197811 + AT_rich Low_complexity Low_complexity 1 27 0 30 0 0 0 chr10 34391511 34391541 -111197747 + AT_rich Low_complexity Low_complexity 1 30 0 1796 141 38 3 chr10 34391541 34391832 -111197456 - AluSx SINE Alu -11 301 1 581 282 11 0 chr10 34391833 34392014 -111197274 - L1M4 LINE L1 -2159 3987 3805 597 161 0 203 chr10 34393209 34393357 -111195931 - MLT1A1 LTR MaLR -210 155 53 2187 114 0 0 chr10 34393357 34393665 -111195623 - AluSx SINE Alu -4 308 1 597 161 0 203 chr10 34393665 34393708 -111195580 - MLT1A1 LTR MaLR -312 53 3 2002 117 0 19 chr10 34394270 34394577 -111194711 - AluSx SINE Alu -11 301 1 1734 131 4 7 chr10 34394652 34394927 -111194361 + AluSx SINE Alu 1 274 -38 4131 120 28 7 chr10 34395668 34396283 -111193005 + LTR9B LTR ERV1 17 644 0 676 258 56 59 chr10 34396487 34396809 -111192479 - MER68 LTR ERV1 -19 543 223 1972 104 13 29 chr10 34396873 34397180 -111192108 - AluSx SINE Alu -10 302 1 2101 113 0 3 chr10 34397859 34398152 -111191136 - AluSx SINE Alu -20 292 1 790 183 29 29 chr10 34398438 34398613 -111190675 - AluJo SINE Alu -16 296 122 1766 144 19 0 chr10 34398673 34398937 -111190351 - AluSx SINE Alu -43 269 1 839 140 15 0 chr10 34398958 34399094 -111190194 - FLAM_C SINE Alu -5 138 1 2244 105 0 0 chr10 34399530 34399835 -111189453 + AluSq SINE Alu 6 310 -3 1231 123 0 17 chr10 34399835 34400055 -111189233 + AluSg/x SINE Alu 108 324 0 2126 104 0 13 chr10 34400344 34400643 -111188645 - AluSc SINE Alu -14 295 1 1411 197 39 0 chr10 34400645 34400929 -111188359 - AluJb SINE Alu -17 295 1 2135 111 7 10 chr10 34401534 34401841 -111187447 + AluSx SINE Alu 1 306 -6 1305 216 11 22 chr10 34401966 34402244 -111187044 - MER87 LTR ERV1 -35 506 232 1134 112 47 0 chr10 34402244 34402414 -111186874 - AluSg/x SINE Alu -15 297 120 2049 114 0 52 chr10 34402619 34402944 -111186344 + AluSg SINE Alu 1 308 -2 2383 53 0 7 chr10 34403221 34403522 -111185766 + AluY SINE Alu 1 299 -12 1450 214 10 0 chr10 34403689 34403988 -111185300 - AluJo SINE Alu -10 302 1 421 262 0 39 chr10 34403989 34404092 -111185196 + L1MC4 LINE L1 6605 6703 -1339 394 248 0 59 chr10 34404018 34404103 -111185185 - L1MC4 LINE L1 -1339 6703 6623 * 1116 133 0 0 chr10 34404103 34404283 -111185005 + (TA)n Simple_repeat Simple_repeat 1 180 0 394 248 0 59 chr10 34404283 34404298 -111184990 - L1MC4 LINE L1 -1419 6623 6609 424 85 34 0 chr10 34404368 34404427 -111184861 + U7 snRNA snRNA 2 62 -1 4313 157 34 63 chr10 34404440 34404595 -111184693 + L1MB5 LINE L1 5153 5311 -863 1925 125 13 7 chr10 34404595 34404900 -111184388 + AluSx SINE Alu 1 307 -5 4313 157 34 63 chr10 34404900 34405313 -111183975 + L1MB5 LINE L1 5311 5734 -440 1358 172 94 4 chr10 34405313 34405580 -111183708 - AluSq SINE Alu -22 291 1 4313 157 34 63 chr10 34405580 34405654 -111183634 + L1MB5 LINE L1 5734 5809 -365 2018 134 0 0 chr10 34405654 34405945 -111183343 - AluSx SINE Alu -21 291 1 2261 107 0 0 chr10 34405950 34406258 -111183030 - AluSg SINE Alu -2 308 1 4313 157 34 63 chr10 34406258 34406631 -111182657 + L1MB5 LINE L1 5813 6153 -21 2080 124 0 0 chr10 34406631 34406930 -111182358 - AluSx SINE Alu -13 299 1 4313 157 34 63 chr10 34406930 34406952 -111182336 + L1MB5 LINE L1 6153 6174 0 1885 144 10 0 chr10 34407386 34407685 -111181603 + AluSx SINE Alu 1 302 -10 2126 99 0 0 chr10 34407758 34408075 -111181213 + AluSc SINE Alu 1 317 0 2095 117 3 7 chr10 34408494 34408802 -111180486 + AluSx SINE Alu 1 307 -5 1735 121 3 94 chr10 34408947 34409093 -111180195 + AluSp SINE Alu 1 102 -211 1367 172 3 98 chr10 34409093 34409418 -111179870 + AluJo SINE Alu 1 294 -18 1735 121 3 94 chr10 34409418 34409601 -111179687 + AluSp SINE Alu 102 300 -13 4150 82 16 2 chr10 34409671 34410217 -111179071 - MER41A LTR ERV1 0 554 1 382 312 40 0 chr10 34410233 34410358 -111178930 - LTR16C LTR ERVL -150 341 212 238 339 54 71 chr10 34410858 34411138 -111178150 + PABL_A LTR ERV1 72 346 -314 22 0 0 0 chr10 34411324 34411346 -111177942 + AT_rich Low_complexity Low_complexity 1 22 0 750 166 13 26 chr10 34411350 34411501 -111177787 + PABL_B LTR ERV1 519 667 0 * 948 167 39 94 chr10 34411501 34411620 -111177668 + MER87 LTR ERV1 26 127 -414 1984 144 0 0 chr10 34411620 34411932 -111177356 - AluSx SINE Alu 0 312 1 948 167 39 94 chr10 34411932 34412041 -111177247 + MER87 LTR ERV1 127 241 -300 1232 139 0 29 chr10 34412171 34412379 -111176909 + AluSg/x SINE Alu 94 295 -17 198 143 0 0 chr10 34412992 34413027 -111176261 + (CA)n Simple_repeat Simple_repeat 2 36 0 2223 96 0 0 chr10 34413358 34413650 -111175638 + AluSp SINE Alu 1 292 -21 1646 159 4 0 chr10 34413659 34413929 -111175359 + L1PB4 LINE L1 5886 6156 0 359 345 24 30 chr10 34414286 34414451 -111174837 - MER5A DNA MER1_type 0 189 26 2175 83 10 3 chr10 34414559 34414860 -111174428 - AluSp SINE Alu -10 303 1 986 120 11 66 chr10 34414888 34415071 -111174217 + FRAM SINE Alu 4 176 0 249 33 0 0 chr10 34415184 34415214 -111174074 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 592 148 0 0 chr10 34415214 34415302 -111173986 - FLAM_C SINE Alu -24 119 32 204 37 0 0 chr10 34415497 34415508 -111173780 + (A)n Simple_repeat Simple_repeat 1 11 -16 775 168 0 8 chr10 34415508 34415627 -111173661 - FLAM_C SINE Alu -15 118 1 204 37 0 0 chr10 34415627 34415642 -111173646 + (A)n Simple_repeat Simple_repeat 10 27 0 2129 110 3 0 chr10 34415659 34415951 -111173337 - AluSq SINE Alu -20 293 1 788 253 52 78 chr10 34416217 34416565 -111172723 - MLT1H LTR MaLR 0 549 211 770 154 0 29 chr10 34416670 34416806 -111172482 + FLAM_C SINE Alu 9 140 -3 2231 104 3 0 chr10 34416840 34417149 -111172139 - AluSx SINE Alu -2 310 1 2017 130 10 0 chr10 34417589 34417890 -111171398 + AluSx SINE Alu 1 304 -8 201 366 0 0 chr10 34418056 34418127 -111171161 + MIR SINE MIR 82 152 -56 249 274 114 12 chr10 34418134 34418232 -111171056 + MER5A DNA MER1_type 1 98 -80 2154 98 3 0 chr10 34418237 34418533 -111170755 + AluSp SINE Alu 2 298 -15 481 224 26 17 chr10 34418552 34418668 -111170620 - MER5B DNA MER1_type -6 172 56 842 273 4 38 chr10 34418727 34418965 -111170323 - LTR33 LTR ERVL -270 251 22 1968 132 0 0 chr10 34419252 34419570 -111169718 + AluSx SINE Alu 1 312 0 2183 96 7 0 chr10 34419624 34419917 -111169371 + AluSx SINE Alu 1 295 -17 1968 139 3 3 chr10 34419929 34420239 -111169049 + AluSx SINE Alu 3 312 0 683 184 0 64 chr10 34420240 34420381 -111168907 + FLAM_A SINE Alu 2 133 0 1890 110 4 4 chr10 34421379 34421651 -111167637 - AluSx SINE Alu -38 274 3 384 152 0 0 chr10 34421742 34421808 -111167480 + (TG)n Simple_repeat Simple_repeat 2 67 0 1830 139 7 0 chr10 34422524 34422812 -111166476 - AluJo SINE Alu -22 290 1 506 296 75 87 chr10 34423640 34423660 -111165628 - L2 LINE L2 -1 3312 3293 2026 132 3 3 chr10 34423660 34423963 -111165325 + AluSx SINE Alu 1 303 -9 2175 96 0 3 chr10 34423966 34424257 -111165031 + AluSg SINE Alu 1 290 -20 506 296 75 87 chr10 34424257 34424566 -111164722 - L2 LINE L2 -22 3291 2983 248 330 139 36 chr10 34424574 34424986 -111164302 + L2 LINE L2 1176 1649 -1665 2336 96 26 0 chr10 34424986 34425288 -111164000 + AluSx SINE Alu 1 310 -2 248 330 139 36 chr10 34425288 34425372 -111163916 + L2 LINE L2 1649 1723 -1591 391 271 102 53 chr10 34425443 34425642 -111163646 + L1ME4a LINE L1 5575 5763 -358 2194 114 0 13 chr10 34425642 34425941 -111163347 + AluSq SINE Alu 1 295 -18 391 271 102 53 chr10 34425941 34426191 -111163097 + L1ME4a LINE L1 5763 6046 -75 2144 114 0 19 chr10 34426218 34426552 -111162736 - AluSq SINE Alu 0 313 1 1594 197 0 40 chr10 34426560 34426860 -111162428 - AluJo SINE Alu -24 288 1 2275 129 0 0 chr10 34427090 34427400 -111161888 - AluSx SINE Alu -2 310 1 1842 180 0 0 chr10 34427402 34427702 -111161586 - AluJo SINE Alu -4 308 9 284 254 0 0 chr10 34427736 34427803 -111161485 + L2 LINE L2 1366 1432 -1882 230 224 0 0 chr10 34428316 34428365 -111160923 - L2 LINE L2 -221 3051 3003 6490 186 98 37 chr10 34428423 34429415 -111159873 + L1MDa LINE L1 1 931 -5609 2224 119 0 0 chr10 34429415 34429708 -111159580 + AluSq SINE Alu 1 293 -20 6490 186 98 37 chr10 34429708 34429719 -111159569 + L1MDa LINE L1 931 940 -5600 1487 197 7 22 chr10 34429719 34429993 -111159295 + AluJo SINE Alu 1 270 -42 6490 186 98 37 chr10 34429993 34431043 -111158245 + L1MDa LINE L1 940 2319 -4221 243 88 0 0 chr10 34431141 34431175 -111158113 + (CA)n Simple_repeat Simple_repeat 1 34 0 657 214 25 0 chr10 34431175 34431334 -111157954 + L1MD2 LINE L1 6195 6357 -2 189 0 0 0 chr10 34431399 34431420 -111157868 + (TA)n Simple_repeat Simple_repeat 2 22 0 2365 97 10 0 chr10 34431420 34431720 -111157568 - AluSq SINE Alu -10 303 1 304 244 73 12 chr10 34431731 34431813 -111157475 - MLT1K LTR MaLR -4 584 498 356 224 35 0 chr10 34432006 34432091 -111157197 - MLT1K LTR MaLR -340 248 161 1601 141 4 0 chr10 34432235 34432483 -111156805 - L1MB2 LINE L1 -238 5933 5685 1666 141 83 7 chr10 34432549 34432826 -111156462 + AluJb SINE Alu 9 306 -6 748 160 24 0 chr10 34433430 34433555 -111155733 + FLAM_A SINE Alu 1 128 -5 2128 118 0 29 chr10 34433556 34433688 -111155600 + AluSx SINE Alu 1 135 -177 216 0 0 0 chr10 34433688 34433712 -111155576 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 2128 118 0 29 chr10 34433712 34433892 -111155396 + AluSx SINE Alu 135 304 -8 283 275 12 0 chr10 34434167 34434247 -111155041 - MIR SINE MIR -70 192 112 1442 161 0 105 chr10 34435089 34435189 -111154099 - AluJo SINE Alu -16 296 187 2353 100 3 0 chr10 34435189 34435498 -111153790 + AluSx SINE Alu 1 310 -2 1442 161 0 105 chr10 34435498 34435701 -111153587 - AluJo SINE Alu -125 187 25 3261 134 19 6 chr10 34435849 34436387 -111152901 + L1PB4 LINE L1 5612 6156 0 1989 125 27 3 chr10 34436390 34436686 -111152602 + AluSx SINE Alu 1 303 -9 1234 151 9 9 chr10 34436698 34436916 -111152372 + L1PB4 LINE L1 5939 6156 0 319 189 81 0 chr10 34437164 34437238 -111152050 - MER53 DNA DNA -49 140 61 2063 110 7 0 chr10 34437245 34437518 -111151770 - AluSx SINE Alu -10 302 28 301 163 0 0 chr10 34437618 34437661 -111151627 - AluSx SINE Alu -260 43 1 * 331 109 0 0 chr10 34437661 34437706 -111151582 + MER53 DNA DNA 144 188 -1 484 237 8 17 chr10 34438004 34438122 -111151166 - MLT1E3 LTR MaLR -1 623 507 1659 160 14 28 chr10 34438385 34438667 -111150621 + AluJo SINE Alu 5 282 -30 404 36 0 18 chr10 34438672 34438727 -111150561 + (TAAA)n Simple_repeat Simple_repeat 2 55 0 1201 203 48 62 chr10 34438767 34439344 -111149944 + MER76 LTR ERV 2 613 -75 1775 177 7 13 chr10 34439346 34439645 -111149643 - AluJo SINE Alu -15 297 1 884 136 6 68 chr10 34439701 34439863 -111149425 - AluJo SINE Alu -160 152 1 2421 98 3 0 chr10 34439959 34440266 -111149022 + AluSp SINE Alu 1 308 -5 1363 156 60 5 chr10 34440276 34440494 -111148794 + AluJo SINE Alu 1 230 -82 429 167 95 0 chr10 34440510 34440594 -111148694 + MER76 LTR ERV 597 688 0 350 244 24 0 chr10 34440646 34440728 -111148560 - L2 LINE L2 0 3272 3189 367 302 36 84 chr10 34440850 34441045 -111148243 - MIR SINE MIR -62 146 7 1778 151 30 27 chr10 34441464 34441763 -111147525 + AluJo SINE Alu 6 305 -7 1286 188 142 0 chr10 34441768 34442029 -111147259 + AluSx SINE Alu 3 300 -12 1994 103 59 7 chr10 34442039 34442350 -111146938 + AluSx SINE Alu 11 312 0 225 301 140 32 chr10 34443183 34443276 -111146012 - L2 LINE L2 -12 3260 3158 4172 113 5 8 chr10 34443369 34443981 -111145307 + MER4B LTR ERV1 1 610 0 1676 157 0 67 chr10 34444029 34444342 -111144946 + AluJb SINE Alu 1 292 -20 1248 95 37 11 chr10 34445140 34445329 -111143959 - MER4B LTR ERV1 -18 592 399 1267 180 190 33 chr10 34445329 34445718 -111143570 + LTR7 LTR ERV1 1 450 0 1931 182 61 62 chr10 34445718 34446295 -111142993 + HERVH LTR ERV1 1 576 -7137 1733 158 17 63 chr10 34446285 34446647 -111142641 + HERVH LTR ERV1 1124 1468 -6245 * 1369 78 6 0 chr10 34446751 34446917 -111142371 - AluSp SINE Alu -146 167 1 5188 198 80 69 chr10 34446923 34447066 -111142222 - L1 LINE L1 -1903 4243 4103 2305 93 3 23 chr10 34447066 34447376 -111141912 + AluSx SINE Alu 1 304 -8 5188 198 80 69 chr10 34447376 34447598 -111141690 - L1 LINE L1 -2043 4103 3885 2130 115 0 7 chr10 34447598 34447912 -111141376 - AluSx SINE Alu 0 312 1 5188 198 80 69 chr10 34447912 34448767 -111140521 - L1 LINE L1 -2261 3885 3041 1476 102 58 0 chr10 34448767 34448972 -111140316 - AluSx SINE Alu -26 286 70 2142 127 55 73 chr10 34448972 34449467 -111139821 - LTR19A LTR ERV1 0 486 1 504 122 0 0 chr10 34449467 34449541 -111139747 - AluSx SINE Alu -238 74 1 5188 198 80 69 chr10 34449541 34449683 -111139605 - L1 LINE L1 -3105 3041 2902 2246 101 0 0 chr10 34449683 34449979 -111139309 + AluSx SINE Alu 1 296 -16 5188 198 80 69 chr10 34449979 34450182 -111139106 - L1 LINE L1 -3244 2902 2581 405 279 30 42 chr10 34450187 34450352 -111138936 - MIR SINE MIR -91 171 9 2227 121 0 0 chr10 34450353 34450660 -111138628 + AluSx SINE Alu 1 307 -5 740 155 0 0 chr10 34451035 34451151 -111138137 + FLAM_C SINE Alu 2 117 -26 279 113 0 0 chr10 34451151 34451204 -111138084 + (CTAA)n Simple_repeat Simple_repeat 4 56 0 21 0 0 0 chr10 34452400 34452421 -111136867 + AT_rich Low_complexity Low_complexity 1 21 0 1995 125 31 0 chr10 34452599 34452905 -111136383 - AluSq SINE Alu 0 315 1 1828 106 4 0 chr10 34452944 34453179 -111136109 - AluSq SINE Alu -77 236 1 2050 128 3 0 chr10 34453237 34453526 -111135762 - AluSx SINE Alu -22 290 1 512 278 45 28 chr10 34453593 34453769 -111135519 + MIR SINE MIR 6 184 -78 1801 98 12 67 chr10 34453812 34453961 -111135327 - L1MA5A LINE L1 -5 6292 6169 2261 112 3 0 chr10 34453961 34454264 -111135024 - AluY SINE Alu -7 304 1 1801 98 12 67 chr10 34454264 34454441 -111134847 - L1MA5A LINE L1 -128 6169 5984 180 216 0 0 chr10 34454448 34454485 -111134803 - MIR SINE MIR -9 253 217 234 197 92 13 chr10 34454506 34454582 -111134706 + L2 LINE L2 3108 3189 -124 665 180 72 80 chr10 34454595 34454789 -111134499 + LTR54 LTR ERV1 59 253 -257 2327 98 0 3 chr10 34454789 34455085 -111134203 - AluSx SINE Alu -17 295 1 665 180 72 80 chr10 34455085 34455268 -111134020 + LTR54 LTR ERV1 253 510 0 2151 128 0 10 chr10 34455959 34456265 -111133023 + AluSx SINE Alu 1 303 -9 406 180 108 43 chr10 34456413 34456552 -111132736 - MER103 DNA DNA -16 150 3 2343 64 3 7 chr10 34456702 34457009 -111132279 - AluY SINE Alu 0 306 1 376 250 8 42 chr10 34457672 34457792 -111131496 + L1ME4a LINE L1 5741 5856 -265 2329 72 0 23 chr10 34457864 34458168 -111131120 + AluY SINE Alu 1 297 -14 1726 158 70 15 chr10 34458483 34458825 -111130463 + MLT1A1 LTR MaLR 5 365 0 279 0 0 0 chr10 34459410 34459441 -111129847 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 8117 45 1 0 chr10 34459441 34460111 -111129177 - L1PA5 LINE L1 -8 6146 5478 2629 46 3 3 chr10 34460111 34460417 -111128871 - AluY SINE Alu -5 306 1 8117 45 1 0 chr10 34460417 34461499 -111127789 - L1PA5 LINE L1 -676 5478 4408 605 165 0 19 chr10 34461507 34461610 -111127678 - FRAM SINE Alu -13 163 63 908 183 21 5 chr10 34461610 34461796 -111127492 + MER5A DNA MER1_type 1 189 0 428 182 11 0 chr10 34462282 34462370 -111126918 + FLAM_A SINE Alu 1 89 -53 322 296 10 10 chr10 34462399 34462497 -111126791 - MER5A DNA MER1_type -83 106 9 1603 138 19 30 chr10 34462608 34462877 -111126411 + AluJo SINE Alu 1 266 -46 2368 93 3 6 chr10 34463105 34463417 -111125871 - AluSq SINE Alu -2 311 1 1758 164 0 21 chr10 34463642 34463929 -111125359 - AluJb SINE Alu -26 286 6 1608 187 0 32 chr10 34464162 34464478 -111124810 - AluJb SINE Alu -4 308 3 2173 116 3 0 chr10 34464484 34464778 -111124510 - AluSx SINE Alu -17 295 1 236 234 21 0 chr10 34465063 34465110 -111124178 - MER91A DNA MER1_type -1 195 148 1873 143 21 3 chr10 34465142 34465303 -111123985 - AluJb SINE Alu -17 295 125 195 42 0 0 chr10 34465303 34465327 -111123961 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 1873 143 21 3 chr10 34465327 34465451 -111123837 - AluJb SINE Alu -187 125 5 255 360 56 0 chr10 34465465 34465554 -111123734 - MER91A DNA MER1_type -23 173 80 2177 126 79 15 chr10 34465554 34465896 -111123392 - THE1B LTR MaLR 0 364 1 898 202 11 65 chr10 34466013 34466159 -111123129 - LTR37B LTR ERV1 -22 446 319 1512 161 115 14 chr10 34466159 34466302 -111122986 - AluJo SINE Alu -5 307 180 1934 127 67 0 chr10 34466302 34466586 -111122702 - AluSx SINE Alu -9 303 1 1512 161 115 14 chr10 34466586 34466721 -111122567 - AluJo SINE Alu -132 180 1 898 202 11 65 chr10 34466721 34466836 -111122452 - LTR37B LTR ERV1 -149 319 199 514 317 67 5 chr10 34467553 34467654 -111121634 + MIR SINE MIR 30 123 -139 189 0 0 0 chr10 34467654 34467675 -111121613 + (CAA)n Simple_repeat Simple_repeat 1 21 0 514 317 67 5 chr10 34467675 34467781 -111121507 + MIR SINE MIR 123 250 -12 1980 151 0 46 chr10 34467782 34467972 -111121316 - AluJo SINE Alu -2 310 140 2226 125 0 0 chr10 34467972 34468268 -111121020 - AluSq SINE Alu -17 296 1 1980 151 0 46 chr10 34468268 34468402 -111120886 - AluJo SINE Alu -172 140 1 1023 155 117 0 chr10 34469438 34469644 -111119644 + MER46B DNA MER2_type 1 105 -131 1053 157 61 5 chr10 34469678 34469876 -111119412 + Tigger4(Zombi) DNA MER2_type 2523 2731 0 1653 70 10 0 chr10 34470099 34470473 -111118815 + L1P4 LINE L1 5276 5692 -473 4142 124 58 27 chr10 34470474 34471448 -111117840 + MER11A LTR ERVK 1 1263 -3 3210 94 2 48 chr10 34471448 34471947 -111117341 + L1PA15 LINE L1 5685 6160 -5 2071 132 30 0 chr10 34471958 34472253 -111117035 + AluSx SINE Alu 1 304 -8 1974 138 35 0 chr10 34472351 34472640 -111116648 + AluSx SINE Alu 1 299 -13 186 338 0 12 chr10 34472670 34472750 -111116538 + L2 LINE L2 3141 3219 -53 472 181 87 27 chr10 34472967 34473116 -111116172 + MER113 DNA MER1_type? 84 241 -280 1904 138 50 0 chr10 34473214 34473511 -111115777 + AluSx SINE Alu 1 312 0 2630 141 18 18 chr10 34474045 34474214 -111115074 + MER6A DNA MER2_type 3 171 -694 2911 82 0 0 chr10 34474214 34474578 -111114710 - THE1B LTR MaLR 0 364 1 2630 141 18 18 chr10 34474578 34474842 -111114446 + MER6A DNA MER2_type 170 436 -169 1756 185 23 31 chr10 34474842 34475146 -111114142 + L1 LINE L1 4019 4321 -1825 1427 206 7 17 chr10 34475146 34475442 -111113846 + AluJo SINE Alu 1 293 -19 1756 185 23 31 chr10 34475442 34475488 -111113800 + L1 LINE L1 4321 4366 -1780 563 99 12 0 chr10 34475489 34475570 -111113718 + MER6A DNA MER2_type 417 498 -107 2356 67 0 14 chr10 34475570 34475897 -111113391 - AluY SINE Alu 0 311 1 906 163 51 17 chr10 34476113 34476291 -111112997 + MLT1E2 LTR MaLR 3 186 -440 994 175 0 44 chr10 34476294 34476477 -111112811 + FRAM SINE Alu 1 174 -2 2128 101 7 39 chr10 34476771 34477077 -111112211 - AluSp SINE Alu -17 296 1 2441 32 7 4 chr10 34477342 34477656 -111111632 + AluY SINE Alu 3 317 0 1905 103 62 35 chr10 34477953 34478243 -111111045 + AluSg SINE Alu 1 298 -12 1664 174 0 10 chr10 34478249 34478537 -111110751 - AluJo SINE Alu -27 285 1 701 149 0 0 chr10 34478575 34478682 -111110606 + FLAM_C SINE Alu 2 108 -35 1939 165 29 64 chr10 34479145 34479716 -111109572 - MLT2A2 LTR ERVL 0 554 1 278 105 0 88 chr10 34479799 34479856 -111109432 - MER75 DNA T2_type 0 514 463 1981 135 34 3 chr10 34479974 34480270 -111109018 - AluSx SINE Alu -4 308 4 819 197 35 0 chr10 34480951 34481093 -111108195 + FRAM SINE Alu 1 145 -31 1425 90 0 94 chr10 34481108 34481331 -111107957 - AluSp SINE Alu -23 290 89 2338 101 0 3 chr10 34481388 34481696 -111107592 + AluSg SINE Alu 1 307 -3 3177 145 42 70 chr10 34481972 34482643 -111106645 - LTR8 LTR ERV1 0 691 40 321 26 0 0 chr10 34482647 34482685 -111106603 + (TTA)n Simple_repeat Simple_repeat 2 39 0 2124 121 4 0 chr10 34482688 34482969 -111106319 - AluSp SINE Alu -31 282 1 1284 217 68 8 chr10 34482969 34483337 -111105951 - L1M2 LINE L1 -3087 3128 2739 627 229 10 44 chr10 34483857 34483941 -111105347 - L1M2 LINE L1 -3470 2745 2660 1814 218 33 81 chr10 34483941 34484450 -111104838 + LTR9 LTR ERV1 3 535 -77 189 0 0 0 chr10 34484450 34484471 -111104817 + (TC)n Simple_repeat Simple_repeat 2 22 0 10660 57 15 40 chr10 34484478 34485894 -111103394 - SVA Other Other 0 1386 6 1814 218 33 81 chr10 34485894 34486017 -111103271 + LTR9 LTR ERV1 541 612 0 627 229 10 44 chr10 34486017 34486137 -111103151 - L1M2 LINE L1 -3555 2660 2548 919 141 141 5 chr10 34486138 34486323 -111102965 - Tigger1 DNA MER2_type -1 2417 2208 * 1001 160 0 0 chr10 34486318 34486474 -111102814 - Tigger1 DNA MER2_type -2261 157 2 1894 242 80 49 chr10 34486477 34487002 -111102286 - L1M2 LINE L1 -3668 2547 2040 2240 123 0 0 chr10 34487002 34487304 -111101984 - AluSx SINE Alu -10 302 1 1894 242 80 49 chr10 34487304 34487604 -111101684 - L1M2 LINE L1 -4175 2040 1773 2386 90 0 3 chr10 34487604 34487904 -111101384 - AluY SINE Alu -12 299 1 1894 242 80 49 chr10 34487904 34488061 -111101227 - L1M2 LINE L1 -4442 1773 1622 2337 92 7 13 chr10 34488063 34488369 -111100919 - AluSp SINE Alu -7 306 3 360 43 0 0 chr10 34488371 34488417 -111100871 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 2115 113 0 3 chr10 34488417 34488701 -111100587 - AluSg SINE Alu -27 283 1 282 196 0 0 chr10 34488909 34488965 -111100323 + L1MA9 LINE L1 6257 6312 0 964 308 44 74 chr10 34489245 34489931 -111099357 + HERV16 LTR ERVL 571 1235 -3761 263 207 142 34 chr10 34489944 34490064 -111099224 + L1ME LINE L1 5328 5459 -702 1599 173 17 75 chr10 34490187 34490558 -111098730 - L1MA9 LINE L1 0 6376 6030 2292 123 0 0 chr10 34490558 34490868 -111098420 - AluSx SINE Alu -2 310 1 1599 173 17 75 chr10 34490868 34490907 -111098381 - L1MA9 LINE L1 -346 6030 5990 660 61 0 0 chr10 34490907 34490989 -111098299 - Alu SINE Alu -10 302 221 4669 157 32 59 chr10 34490989 34492596 -111096692 - L1MA9 LINE L1 -376 6000 4425 246 128 0 0 chr10 34492596 34492635 -111096653 + (TTCC)n Simple_repeat Simple_repeat 4 42 0 1968 177 0 0 chr10 34492638 34492949 -111096339 - AluJb SINE Alu -1 311 1 2218 113 7 3 chr10 34492961 34493271 -111096017 - AluSp SINE Alu -1 312 2 2156 229 51 117 chr10 34493271 34494711 -111094577 - L1MA9 LINE L1 -2837 3373 1840 2318 97 3 0 chr10 34494711 34495011 -111094277 - AluSg SINE Alu -9 301 1 2156 229 51 117 chr10 34495011 34495336 -111093952 - L1MA9 LINE L1 -4370 1840 1495 2003 106 24 27 chr10 34495336 34495628 -111093660 - AluSg SINE Alu -19 291 1 2156 229 51 117 chr10 34495628 34495757 -111093531 - L1MA9 LINE L1 -4715 1495 4 317 219 73 12 chr10 34496215 34496297 -111092991 - MLT1H-int LTR MaLR -1280 91 5 353 220 30 20 chr10 34496301 34496401 -111092887 - MLT1H LTR MaLR 0 549 449 704 162 0 0 chr10 34496414 34496531 -111092757 - AluSg/x SINE Alu 0 309 193 293 316 166 21 chr10 34496532 34496725 -111092563 - MLT1B LTR MaLR -89 460 240 266 267 35 0 chr10 34496879 34496965 -111092323 - L1MC4a LINE L1 -551 7257 7169 1237 93 12 0 chr10 34496967 34497128 -111092160 - AluSg/x SINE Alu -6 304 142 978 254 80 75 chr10 34497230 34497589 -111091699 - L1MC4a LINE L1 -856 6952 6589 261 57 0 0 chr10 34497589 34497624 -111091664 + (CA)n Simple_repeat Simple_repeat 2 36 0 978 254 80 75 chr10 34497624 34497690 -111091598 - L1MC4a LINE L1 -1219 6589 6525 2016 135 4 4 chr10 34497718 34497999 -111091289 - AluJb SINE Alu -31 281 1 2306 110 48 28 chr10 34498370 34498726 -111090562 + THE1B LTR MaLR 1 363 -1 2084 127 3 3 chr10 34498787 34499079 -111090209 + AluSp SINE Alu 4 295 -18 1375 154 162 18 chr10 34499196 34499468 -111089820 - AluSx SINE Alu -1 311 1 1638 159 16 41 chr10 34499951 34500053 -111089235 + L1MB3 LINE L1 5582 5685 -498 2159 139 0 0 chr10 34500053 34500362 -111088926 - AluSg SINE Alu -1 309 1 1638 159 16 41 chr10 34500362 34500574 -111088714 + L1MB3 LINE L1 5685 5888 -295 648 90 0 11 chr10 34500654 34500743 -111088545 + AluSp SINE Alu 64 151 -162 509 164 100 1 chr10 34500749 34500852 -111088436 - MLT1B LTR MaLR -269 112 1 228 111 0 0 chr10 34500852 34500888 -111088400 - L1M3 LINE L1 -243 5928 5893 2255 125 0 3 chr10 34500927 34501238 -111088050 + AluSx SINE Alu 1 310 -2 745 244 78 5 chr10 34501261 34501466 -111087822 + MLT1A2 LTR MaLR 155 374 0 1507 120 32 16 chr10 34501470 34501720 -111087568 + L1MB3 LINE L1 5928 6181 -2 365 291 213 0 chr10 34502396 34502537 -111086751 + MER5A DNA MER1_type 19 189 0 198 308 0 0 chr10 34502566 34502618 -111086670 + MER5A DNA MER1_type 43 94 -95 1304 170 118 15 chr10 34502706 34502977 -111086311 + AluJo SINE Alu 5 303 -9 1847 125 15 95 chr10 34502977 34503304 -111085984 + AluSx SINE Alu 1 301 -11 456 19 0 0 chr10 34503306 34503359 -111085929 + (GGAA)n Simple_repeat Simple_repeat 4 56 0 4371 78 9 0 chr10 34503418 34503967 -111085321 - MER41A LTR ERV1 0 554 1 240 270 87 48 chr10 34504983 34505059 -111084229 + MIR SINE MIR 18 102 -160 2013 130 0 7 chr10 34505059 34505344 -111083944 - AluJb SINE Alu -25 287 5 240 270 87 48 chr10 34505344 34505393 -111083895 + MIR SINE MIR 102 148 -114 2259 137 0 0 chr10 34505519 34505832 -111083456 - AluSq SINE Alu 0 313 1 183 111 0 0 chr10 34505832 34505859 -111083429 - MER5A DNA MER1_type -113 76 50 851 249 38 38 chr10 34505900 34506189 -111083099 - L1MC4a LINE L1 0 7808 7520 1049 155 59 5 chr10 34506247 34506566 -111082722 - AluJo SINE Alu 0 415 87 366 227 87 70 chr10 34506599 34506706 -111082582 - MER5A DNA MER1_type -1 188 84 2147 103 24 0 chr10 34506706 34506996 -111082292 - AluSx SINE Alu -13 299 3 2213 101 14 0 chr10 34506997 34507294 -111081994 - AluSx SINE Alu -11 301 1 366 227 87 70 chr10 34507294 34507369 -111081919 - MER5A DNA MER1_type -104 85 1 1484 166 46 53 chr10 34508160 34508462 -111080826 + AluJo SINE Alu 7 306 -6 2320 86 3 13 chr10 34508485 34508787 -111080501 - AluSp SINE Alu -14 299 1 1839 145 13 59 chr10 34508792 34508836 -111080452 - L1MB2 LINE L1 -2 6169 6125 192 111 0 0 chr10 34508836 34508872 -111080416 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 1320 170 93 4 chr10 34508872 34509131 -111080157 - AluJo SINE Alu -30 282 1 1839 145 13 59 chr10 34509131 34509224 -111080064 - L1MB2 LINE L1 -45 6126 6030 1777 117 23 12 chr10 34509224 34509480 -111079808 - AluSq SINE Alu -54 259 1 1839 145 13 59 chr10 34509480 34509713 -111079575 - L1MB2 LINE L1 -141 6030 5814 674 108 0 0 chr10 34509715 34509817 -111079471 - AluY SINE Alu 0 311 210 1163 147 84 0 chr10 34509819 34510009 -111079279 - L1MB2 LINE L1 -358 5813 5608 2490 66 3 0 chr10 34510012 34510314 -111078974 - AluY SINE Alu -8 303 1 1467 214 3 3 chr10 34510320 34510619 -111078669 - AluJo SINE Alu -13 299 1 557 232 46 0 chr10 34510619 34510770 -111078518 - L1MB2 LINE L1 -979 5167 5010 24 0 0 0 chr10 34510770 34510794 -111078494 + AT_rich Low_complexity Low_complexity 1 24 0 2149 105 3 14 chr10 34510794 34511090 -111078198 - AluSx SINE Alu -14 298 6 2158 133 0 3 chr10 34511097 34511405 -111077883 - AluSx SINE Alu -5 307 1 1708 230 112 18 chr10 34511405 34511809 -111077479 - L1 LINE L1 -1347 4799 4434 1969 129 34 3 chr10 34511809 34512104 -111077184 - AluSq SINE Alu -9 304 1 1708 230 112 18 chr10 34512104 34512131 -111077157 - L1 LINE L1 -1712 4434 4411 345 47 0 0 chr10 34512131 34512174 -111077114 + (TG)n Simple_repeat Simple_repeat 2 44 0 1708 230 112 18 chr10 34512174 34512428 -111076860 - L1 LINE L1 -1735 4411 4009 2771 192 62 114 chr10 34512450 34512862 -111076426 - MER21B LTR ERV1 -54 809 462 2397 95 3 0 chr10 34512862 34513168 -111076120 - AluSp SINE Alu -6 307 1 2771 192 62 114 chr10 34513168 34513608 -111075680 - MER21B LTR ERV1 -401 462 1 1150 205 27 4 chr10 34513609 34513872 -111075416 - L1 LINE L1 -2144 4002 3734 1708 123 67 8 chr10 34513883 34514136 -111075152 + AluSx SINE Alu 1 268 -44 416 236 107 36 chr10 34514678 34514690 -111074598 + MER63 DNA MER1_type 907 917 -143 207 0 0 0 chr10 34514690 34514713 -111074575 + (TA)n Simple_repeat Simple_repeat 2 24 0 2056 119 7 27 chr10 34514714 34515008 -111074280 - AluSx SINE Alu -23 289 2 416 236 107 36 chr10 34515008 34515133 -111074155 + MER63 DNA MER1_type 916 1056 -4 2365 78 20 0 chr10 34515336 34515632 -111073656 + AluSg SINE Alu 1 302 -8 441 287 66 18 chr10 34515699 34515866 -111073422 - MIR SINE MIR -49 213 39 2284 107 0 7 chr10 34516144 34516444 -111072844 + AluSx SINE Alu 1 298 -14 229 189 0 0 chr10 34516808 34516861 -111072427 + MIR SINE MIR 145 197 -65 1502 260 220 9 chr10 34517540 34518477 -111070811 + L2 LINE L2 2176 3312 -1 189 0 0 0 chr10 34519273 34519294 -111069994 + (T)n Simple_repeat Simple_repeat 1 21 0 250 186 17 17 chr10 34520415 34520474 -111068814 + MIR SINE MIR 82 140 -122 2268 118 10 0 chr10 34521377 34521683 -111067605 + AluSx SINE Alu 2 310 -2 2097 120 14 0 chr10 34521832 34522123 -111067165 - AluSq SINE Alu -16 297 3 2089 95 46 11 chr10 34526186 34526319 -111062969 + AluSg SINE Alu 1 128 -182 2304 92 0 29 chr10 34526319 34526635 -111062653 + AluY SINE Alu 1 307 -4 2089 95 46 11 chr10 34526635 34526786 -111062502 + AluSg SINE Alu 128 295 -15 480 230 61 97 chr10 34526927 34527063 -111062225 + MIR3 SINE MIR 12 138 -70 2220 117 0 3 chr10 34527063 34527372 -111061916 + AluSx SINE Alu 1 308 -4 480 230 61 97 chr10 34527372 34527441 -111061847 + MIR3 SINE MIR 138 208 0 227 246 9 97 chr10 34527778 34527892 -111061396 - MIR3 SINE MIR -3 205 102 491 315 80 41 chr10 34528045 34528359 -111060929 + L3 LINE CR1 1155 1480 -97 1994 116 0 33 chr10 34528402 34528704 -111060584 - AluJb SINE Alu -20 292 1 266 53 0 0 chr10 34528923 34528961 -111060327 - AluSx SINE Alu -9 293 256 1660 98 0 5 chr10 34528961 34529176 -111060112 - AluSx SINE Alu -98 214 1 2248 12 0 0 chr10 34529206 34529453 -111059835 - AluYa5 SINE Alu -2 309 63 490 196 120 120 chr10 34529627 34529903 -111059385 + MER46C DNA MER2_type 3 281 -57 2417 76 7 3 chr10 34529903 34530207 -111059081 + AluSg SINE Alu 1 305 -5 490 196 120 120 chr10 34530207 34530231 -111059057 + MER46C DNA MER2_type 280 303 -35 1923 108 16 0 chr10 34531035 34531293 -111057995 + AluSx SINE Alu 29 290 -22 2213 102 0 0 chr10 34531293 34531577 -111057711 + AluSg1 SINE Alu 1 284 -25 2423 76 0 0 chr10 34531971 34532272 -111057016 - AluY SINE Alu -10 301 1 1151 84 0 0 chr10 34532272 34532415 -111056873 - AluSq/x SINE Alu -170 143 1 729 112 0 80 chr10 34532732 34532857 -111056431 - AluSq/x SINE Alu -198 115 1 2234 112 0 7 chr10 34533181 34533484 -111055804 - AluSx SINE Alu -11 301 1 1738 161 46 3 chr10 34533762 34534047 -111055241 + AluJb SINE Alu 1 297 -15 2092 137 54 81 chr10 34534639 34534834 -111054454 + Tigger2a DNA MER2_type 1 200 -2508 1833 170 28 0 chr10 34534834 34535122 -111054166 - AluJb SINE Alu -16 296 1 2092 137 54 81 chr10 34535122 34535372 -111053916 + Tigger2a DNA MER2_type 200 434 0 193 346 49 12 chr10 34535399 34535480 -111053808 + L3b LINE CR1 1426 1509 -74 204 40 0 0 chr10 34536983 34537008 -111052280 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 2143 110 4 0 chr10 34537010 34537291 -111051997 - AluSx SINE Alu -30 282 1 1425 145 32 119 chr10 34539819 34540164 -111049124 - AluYb8 SINE Alu -3 315 1 416 141 0 0 chr10 34540321 34540392 -111048896 + AluS SINE Alu 1 71 -247 30 27 0 0 chr10 34540910 34540947 -111048341 + AT_rich Low_complexity Low_complexity 1 37 0 331 299 249 28 chr10 34541292 34541469 -111047819 - MIR SINE MIR -20 242 27 267 158 53 0 chr10 34542026 34542083 -111047205 - MER116 DNA Mariner -3 77 18 1579 146 117 10 chr10 34542225 34542534 -111046754 - MER46B DNA MER2_type 0 236 20 1050 152 71 10 chr10 34543644 34543841 -111045447 - MER3 DNA MER1_type 0 209 1 2085 96 0 42 chr10 34543897 34544210 -111045078 - AluSg SINE Alu -10 300 1 2271 85 3 3 chr10 34544603 34544897 -111044391 + AluSg SINE Alu 1 294 -16 2216 108 0 16 chr10 34545256 34545563 -111043725 - AluSq SINE Alu -11 302 1 2414 50 0 0 chr10 34545769 34546073 -111043215 - AluY SINE Alu 0 304 1 263 237 53 0 chr10 34546979 34547055 -111042233 - L1MC4 LINE L1 -40 8002 7923 2295 114 0 0 chr10 34547156 34547462 -111041826 - AluSx SINE Alu -6 306 1 240 111 0 0 chr10 34547517 34547553 -111041735 + (CAT)n Simple_repeat Simple_repeat 1 36 0 1076 249 189 38 chr10 34547553 34547892 -111041396 - L1MC4 LINE L1 -507 7535 7249 2236 95 7 3 chr10 34547892 34548188 -111041100 - AluY SINE Alu -14 297 1 1076 249 189 38 chr10 34548188 34548225 -111041063 - L1MC4 LINE L1 -793 7249 7219 1216 52 0 0 chr10 34548225 34548378 -111040910 - L1PA5 LINE L1 -4 6150 5998 1076 249 189 38 chr10 34548378 34548411 -111040877 - L1MC4 LINE L1 -823 7219 7192 2391 97 0 0 chr10 34548411 34548710 -111040578 - AluSx SINE Alu -13 299 1 1076 249 189 38 chr10 34548710 34549015 -111040273 - L1MC4 LINE L1 -850 7192 6934 504 86 0 0 chr10 34549015 34549085 -111040203 + (TCTA)n Simple_repeat Simple_repeat 1 70 0 1076 249 189 38 chr10 34549085 34549127 -111040161 - L1MC4 LINE L1 -1108 6934 6661 2166 265 49 9 chr10 34549184 34549943 -111039345 + L1MD2 LINE L1 4416 5204 -942 1506 76 0 0 chr10 34549968 34550153 -111039135 + AluY SINE Alu 1 185 -126 596 78 0 0 chr10 34550153 34550230 -111039058 + AluY SINE Alu 218 294 -17 3684 192 49 50 chr10 34550234 34550342 -111038946 + L1MD2 LINE L1 5227 5334 -1025 2146 120 0 7 chr10 34550342 34550641 -111038647 + AluSx SINE Alu 1 297 -15 3684 192 49 50 chr10 34550641 34550998 -111038290 + L1MD2 LINE L1 5334 5690 -669 2102 138 7 0 chr10 34550998 34551302 -111037986 + AluSx SINE Alu 1 306 -6 3684 192 49 50 chr10 34551302 34551916 -111037372 + L1MD2 LINE L1 5690 6309 -50 2523 71 6 0 chr10 34552614 34552925 -111036363 + AluSp SINE Alu 1 313 0 1055 230 28 0 chr10 34553187 34553400 -111035888 + MER58A DNA MER1_type 3 221 -3 473 298 92 25 chr10 34554479 34554717 -111034571 + MIR SINE MIR 3 256 -6 264 30 0 0 chr10 34554834 34554867 -111034421 + (CA)n Simple_repeat Simple_repeat 2 34 0 323 234 56 54 chr10 34554935 34555173 -111034115 - L1MC4a LINE L1 -132 5989 5761 1841 123 38 34 chr10 34556081 34556373 -111032915 + AluSx SINE Alu 1 293 -19 4389 129 31 18 chr10 34556635 34557410 -111031878 + L1MA3 LINE L1 5521 6305 0 21 36 0 0 chr10 34557410 34557438 -111031850 + AT_rich Low_complexity Low_complexity 1 28 0 970 85 0 0 chr10 34557550 34557680 -111031608 + FLAM_C SINE Alu 1 130 -3 416 253 26 113 chr10 34557856 34557889 -111031399 + MIR SINE MIR 2 36 -226 2190 139 0 0 chr10 34557889 34558192 -111031096 + AluSx SINE Alu 1 303 -9 416 253 26 113 chr10 34558192 34558352 -111030936 + MIR SINE MIR 36 178 -84 1849 115 4 4 chr10 34558611 34558864 -111030424 + AluSx SINE Alu 44 296 -16 394 290 52 5 chr10 34558922 34559005 -111030283 + L1MC4 LINE L1 7841 7919 -123 2572 49 0 10 chr10 34559005 34559313 -111029975 + AluY SINE Alu 1 305 -6 394 290 52 5 chr10 34559313 34559422 -111029866 + L1MC4 LINE L1 7919 8042 0 1545 145 148 6 chr10 34559586 34559904 -111029384 - Tigger7 DNA MER2_type 0 2487 2125 540 202 37 9 chr10 34559938 34560047 -111029241 - Tigger7 DNA MER2_type -2375 112 1 371 268 81 42 chr10 34560055 34560272 -111029016 - L2 LINE L2 -353 2919 2688 548 231 34 84 chr10 34560451 34560689 -111028599 + L2 LINE L2 3084 3309 -4 300 314 204 40 chr10 34561285 34561584 -111027704 - L2 LINE L2 -19 3294 2947 2314 94 16 0 chr10 34561584 34561891 -111027397 + AluSx SINE Alu 1 312 0 21 36 0 0 chr10 34561958 34561986 -111027302 + AT_rich Low_complexity Low_complexity 1 28 0 22 56 0 0 chr10 34562106 34562142 -111027146 + AT_rich Low_complexity Low_complexity 1 36 0 198 357 83 79 chr10 34562793 34563059 -111026229 + L2 LINE L2 2926 3192 -80 25 51 0 0 chr10 34563359 34563398 -111025890 + AT_rich Low_complexity Low_complexity 1 39 0 992 264 59 52 chr10 34563727 34564122 -111025166 + L2 LINE L2 2584 3057 -256 1793 229 68 15 chr10 34564125 34564785 -111024503 + L1ME2 LINE L1 5442 6154 -10 373 210 95 70 chr10 34564824 34565024 -111024264 + L1MC4 LINE L1 7826 8030 -12 383 298 149 0 chr10 34565066 34565247 -111024041 + L2 LINE L2 3106 3313 0 2137 114 0 0 chr10 34565356 34565636 -111023652 + AluSx SINE Alu 22 301 -11 586 308 157 26 chr10 34566372 34566830 -111022458 + L2 LINE L2 2125 2642 -672 861 234 62 14 chr10 34567347 34567638 -111021650 + L1MC4 LINE L1 7284 7588 -454 2163 98 3 14 chr10 34567658 34567954 -111021334 - AluSx SINE Alu -19 293 1 576 153 102 77 chr10 34567965 34568161 -111021127 + L1MC4 LINE L1 7839 8039 -3 231 277 18 66 chr10 34568409 34568575 -111020713 + MER103 DNA DNA 1 158 -8 1987 125 35 0 chr10 34568575 34568862 -111020426 - AluSx SINE Alu -15 297 1 940 227 14 5 chr10 34569106 34569313 -111019975 + MER58A DNA MER1_type 12 220 -4 848 203 31 0 chr10 34569328 34569491 -111019797 - FAM SINE Alu -7 168 1 206 259 56 19 chr10 34569703 34569757 -111019531 - MIR SINE MIR -187 75 20 1835 146 20 65 chr10 34570710 34571107 -111018181 + L1MA4 LINE L1 5913 6291 -9 214 312 214 0 chr10 34571552 34571659 -111017629 + MIR SINE MIR 25 152 -56 2418 72 0 7 chr10 34571907 34572212 -111017076 - AluY SINE Alu -8 303 1 1339 119 115 9 chr10 34572377 34572603 -111016685 + AluSx SINE Alu 56 305 -7 234 0 0 0 chr10 34572724 34572750 -111016538 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1978 102 0 24 chr10 34572761 34573085 -111016203 + AluY SINE Alu 1 317 0 509 308 111 31 chr10 34574273 34574598 -111014690 + MLT1I LTR MaLR 59 409 0 2387 190 90 25 chr10 34574826 34575112 -111014176 + L1MA6 LINE L1 5372 5638 -660 264 30 0 0 chr10 34575112 34575145 -111014143 + (CA)n Simple_repeat Simple_repeat 2 34 0 2387 190 90 25 chr10 34575145 34575616 -111013672 + L1MA6 LINE L1 5638 6267 -31 1574 190 57 9 chr10 34575616 34575947 -111013341 - MER7A DNA MER2_type -1 345 1 2387 190 90 25 chr10 34575947 34575979 -111013309 + L1MA6 LINE L1 6267 6295 -3 963 273 45 36 chr10 34577124 34577483 -111011805 + MLT1I LTR MaLR 40 401 -8 486 340 79 23 chr10 34577951 34578356 -111010932 - L2 LINE L2 -237 3035 2545 1310 117 0 0 chr10 34579250 34579429 -111009859 + AluSq SINE Alu 132 310 -3 182 364 85 0 chr10 34580282 34580411 -111008877 - L2 LINE L2 -278 2994 2855 695 213 173 6 chr10 34580413 34580851 -111008437 + MLT1F1 LTR MaLR 1 567 0 391 279 66 90 chr10 34581001 34581109 -111008179 + MLT1F1-int LTR MaLR 308 417 -954 2195 77 30 7 chr10 34581109 34581406 -111007882 + AluSc SINE Alu 1 304 -5 391 279 66 90 chr10 34581406 34581598 -111007690 + MLT1F1-int LTR MaLR 417 601 -770 262 346 34 22 chr10 34581833 34582012 -111007276 + MLT1F1-int LTR MaLR 699 879 -492 954 266 117 19 chr10 34582532 34582961 -111006327 - MER20B DNA MER1_type -312 471 1 1905 307 152 25 chr10 34583224 34584112 -111005176 + L2 LINE L2 75 1173 -2141 2335 95 7 3 chr10 34584112 34584417 -111004871 - AluSq SINE Alu -7 306 1 1905 307 152 25 chr10 34584417 34584794 -111004494 + L2 LINE L2 1173 1501 -1813 250 203 31 16 chr10 34584850 34584914 -111004374 - L2 LINE L2 -1686 1628 1564 1753 254 85 25 chr10 34584992 34585684 -111003604 - L1MEc LINE L1 -5483 913 180 1081 268 282 32 chr10 34585746 34586813 -111002475 + L2 LINE L2 1729 3070 -243 814 167 7 0 chr10 34586850 34587023 -111002265 + AluJb SINE Alu 145 318 0 1105 142 6 6 chr10 34587426 34587595 -111001693 + AluSg/x SINE Alu 114 282 -28 1631 158 34 34 chr10 34588597 34588888 -111000400 + AluJb SINE Alu 1 291 -21 195 69 0 0 chr10 34589363 34589392 -110999896 + (TG)n Simple_repeat Simple_repeat 2 30 0 2282 72 3 3 chr10 34591269 34591560 -110997728 - AluSq SINE Alu -22 291 1 2230 106 0 3 chr10 34592553 34592856 -110996432 + AluSx SINE Alu 1 302 -10 23 33 0 0 chr10 34594621 34594651 -110994637 + GC_rich Low_complexity Low_complexity 1 30 0 198 287 32 167 chr10 34596792 34597074 -110992214 - L2 LINE L2 -101 3171 2928 183 42 0 0 chr10 34597624 34597648 -110991640 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1704 162 20 14 chr10 34597650 34597947 -110991341 - AluJo SINE Alu -11 301 3 2342 97 0 3 chr10 34599424 34599724 -110989564 + AluSq SINE Alu 1 299 -14 222 128 0 0 chr10 34599752 34599791 -110989497 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 189 0 0 0 chr10 34600007 34600028 -110989260 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2171 98 0 17 chr10 34600036 34600323 -110988965 - AluSx SINE Alu -30 282 1 2515 56 0 10 chr10 34600330 34600634 -110988654 - AluY SINE Alu -10 301 1 388 305 0 0 chr10 34600695 34600800 -110988488 + MIR SINE MIR 158 262 0 191 273 18 0 chr10 34600801 34600856 -110988432 + L2 LINE L2 3001 3056 -216 190 176 0 0 chr10 34600852 34600886 -110988402 + MIR SINE MIR 103 136 -72 * 312 323 213 0 chr10 34600975 34601139 -110988149 - MIR SINE MIR 0 262 64 2237 125 3 0 chr10 34601161 34601473 -110987815 + AluSp SINE Alu 1 313 0 331 349 32 24 chr10 34601833 34601959 -110987329 - L2 LINE L2 -1 3271 3145 1389 96 0 0 chr10 34602581 34602758 -110986530 + AluY SINE Alu 122 298 -13 2694 135 43 22 chr10 34602992 34603452 -110985836 + MER1A DNA MER1_type 60 529 0 2243 97 47 0 chr10 34603900 34604198 -110985090 - AluSx SINE Alu 0 312 1 2453 50 10 0 chr10 34604991 34605289 -110983999 + AluY SINE Alu 2 302 -9 1712 179 7 3 chr10 34605706 34606047 -110983241 - AluJo SINE Alu 0 342 1 313 309 74 28 chr10 34606085 34606139 -110983149 - L1ME4a LINE L1 -188 5933 5883 2270 113 3 0 chr10 34606139 34606440 -110982848 - AluSx SINE Alu -8 304 3 313 309 74 28 chr10 34606440 34606602 -110982686 - L1ME4a LINE L1 -238 5883 5707 1857 145 46 3 chr10 34606653 34606935 -110982353 + AluJb SINE Alu 5 298 -14 432 233 48 20 chr10 34607204 34607350 -110981938 - MER103 DNA DNA -15 151 2 296 303 114 8 chr10 34607776 34607908 -110981380 + MIR SINE MIR 117 262 0 24 0 0 0 chr10 34608076 34608100 -110981188 + AT_rich Low_complexity Low_complexity 1 24 0 2246 101 0 0 chr10 34608909 34609196 -110980092 + AluSx SINE Alu 11 297 -15 590 225 104 8 chr10 34609196 34609421 -110979867 + LTR56 LTR ERV1 210 437 0 513 279 0 14 chr10 34609449 34609589 -110979699 + MIR SINE MIR 1 138 -124 679 172 60 8 chr10 34609608 34609742 -110979546 + MER34C LTR ERV1 1 141 -444 2886 136 68 52 chr10 34609751 34610020 -110979268 + LTR36 LTR ERV1 1 264 -347 3600 84 80 0 chr10 34610020 34610533 -110978755 + MER41A LTR ERV1 1 554 0 2638 137 19 12 chr10 34610541 34610966 -110978322 + MSTA LTR MaLR 1 428 0 2886 136 68 52 chr10 34610966 34611288 -110978000 + LTR36 LTR ERV1 270 611 0 380 198 93 0 chr10 34611288 34611368 -110977920 + MER34C LTR ERV1 158 245 -340 1635 183 0 24 chr10 34611379 34611668 -110977620 - AluJb SINE Alu -30 282 1 2157 106 3 60 chr10 34612290 34612621 -110976667 - AluSq SINE Alu -1 312 1 393 329 71 0 chr10 34612781 34612921 -110976367 + MIR3 SINE MIR 50 199 -9 1263 125 46 19 chr10 34613091 34613307 -110975981 - MER30 DNA MER1_type -8 222 1 180 77 0 0 chr10 34613732 34613758 -110975530 + (CAA)n Simple_repeat Simple_repeat 1 26 0 2054 114 13 25 chr10 34613819 34614135 -110975153 + AluSx SINE Alu 1 312 0 2066 108 3 0 chr10 34614139 34614425 -110974863 + AluSq SINE Alu 1 287 -26 258 32 0 0 chr10 34615258 34615289 -110973999 + (TATG)n Simple_repeat Simple_repeat 2 32 0 2109 109 18 0 chr10 34615295 34615578 -110973710 - AluSx SINE Alu -24 288 1 292 364 39 10 chr10 34616597 34616803 -110972485 + L2 LINE L2 2826 3037 -235 392 314 32 8 chr10 34617108 34617232 -110972056 - MIR SINE MIR -18 244 118 22 56 0 0 chr10 34617685 34617721 -110971567 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr10 34618353 34618374 -110970914 + AT_rich Low_complexity Low_complexity 1 21 0 492 321 60 6 chr10 34618703 34618871 -110970417 + MER5B DNA MER1_type 2 178 0 976 189 5 19 chr10 34618923 34619135 -110970153 + MER3 DNA MER1_type 1 209 0 2129 86 16 30 chr10 34619904 34620207 -110969081 + AluSx SINE Alu 1 299 -13 265 246 14 0 chr10 34620211 34620280 -110969008 + L2 LINE L2 3003 3072 -241 836 184 32 11 chr10 34620397 34620582 -110968706 + MER5A DNA MER1_type 1 189 0 2193 88 3 11 chr10 34621027 34621334 -110967954 + AluSq SINE Alu 1 305 0 722 270 46 35 chr10 34621369 34621628 -110967660 + MIR SINE MIR 1 262 0 763 269 71 4 chr10 34621792 34622030 -110967258 + MLT1L LTR MaLR 138 391 -224 27 62 0 0 chr10 34622435 34622483 -110966805 + AT_rich Low_complexity Low_complexity 1 48 0 31 26 0 0 chr10 34622941 34622979 -110966309 + AT_rich Low_complexity Low_complexity 1 38 0 244 333 54 21 chr10 34623045 34623138 -110966150 + L2 LINE L2 3189 3284 -29 23 0 0 0 chr10 34623226 34623249 -110966039 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr10 34624076 34624100 -110965188 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr10 34624598 34624619 -110964669 + AT_rich Low_complexity Low_complexity 1 21 0 210 105 0 0 chr10 34627338 34627376 -110961912 + (T)n Simple_repeat Simple_repeat 1 38 0 593 115 10 0 chr10 34628382 34628478 -110960810 + (CA)n Simple_repeat Simple_repeat 1 97 0 317 229 133 0 chr10 34628535 34628640 -110960648 + MER94 DNA DNA 1 119 -15 418 262 40 47 chr10 34629120 34629269 -110960019 - L2 LINE L2 -5 3308 3161 2690 118 23 5 chr10 34629269 34629700 -110959588 - Tigger2 DNA MER2_type 0 2718 2280 441 129 0 14 chr10 34629698 34629768 -110959520 - Tigger2 DNA MER2_type -2649 69 1 * 556 293 67 18 chr10 34629768 34629813 -110959475 - L2 LINE L2 -158 3155 3114 2209 110 3 0 chr10 34629813 34630104 -110959184 + AluSx SINE Alu 1 292 -20 556 293 67 18 chr10 34630104 34630427 -110958861 - L2 LINE L2 -199 3114 2770 216 0 0 0 chr10 34630786 34630810 -110958478 + (T)n Simple_repeat Simple_repeat 1 24 0 2431 106 0 0 chr10 34630821 34631178 -110958110 + AluSx SINE Alu 1 357 0 536 232 47 62 chr10 34631534 34631637 -110957651 - MER46C DNA MER2_type -129 209 106 1890 167 7 0 chr10 34631637 34631936 -110957352 - AluJb SINE Alu -10 302 2 536 232 47 62 chr10 34631936 34632043 -110957245 - MER46C DNA MER2_type -232 106 2 332 262 162 77 chr10 34632493 34632920 -110956368 + MLT1J LTR MaLR 1 463 -48 1999 135 0 17 chr10 34632920 34633251 -110956037 - AluSx SINE Alu 0 326 1 1798 179 23 6 chr10 34633251 34633597 -110955691 - L1PB4 LINE L1 -12 6144 5793 315 177 25 222 chr10 34633719 34633917 -110955371 + L1ME3 LINE L1 6001 6159 -3 1820 165 0 3 chr10 34633919 34634243 -110955045 - AluJb SINE Alu 0 323 1 2006 136 17 0 chr10 34634356 34634650 -110954638 - AluSx SINE Alu -11 301 3 654 160 0 0 chr10 34634841 34634941 -110954347 - FLAM_A SINE Alu -19 123 24 1792 140 39 11 chr10 34636082 34636367 -110952921 - AluSx SINE Alu -19 293 1 2448 102 37 8 chr10 34637018 34637372 -110951916 + THE1B LTR MaLR 1 364 0 2179 122 0 0 chr10 34637649 34637943 -110951345 + AluSq SINE Alu 1 294 -19 1764 178 17 3 chr10 34639219 34639512 -110949776 - AluJo SINE Alu -15 297 1 673 233 90 11 chr10 34640032 34640221 -110949067 + MIR SINE MIR 23 226 -36 5537 89 8 1 chr10 34640295 34641079 -110948209 - L1MA2 LINE L1 0 6304 5516 286 281 100 62 chr10 34641691 34641851 -110947437 - MIR SINE MIR -11 251 86 1539 167 41 41 chr10 34641901 34642195 -110947093 + AluJb SINE Alu 2 295 -17 453 207 85 0 chr10 34642704 34642868 -110946420 + MER113 DNA MER1_type? 4 181 -340 587 106 0 0 chr10 34642868 34642953 -110946335 - U6 snRNA snRNA -22 85 1 1669 142 55 10 chr10 34643159 34643448 -110945840 - AluSx SINE Alu -10 302 1 2030 122 0 7 chr10 34644000 34644315 -110944973 + AluSx SINE Alu 6 318 0 1904 125 0 44 chr10 34645095 34645228 -110944060 + AluJo SINE Alu 1 138 -165 2466 68 13 0 chr10 34645228 34645535 -110943753 + AluY SINE Alu 1 311 0 1904 125 0 44 chr10 34645535 34645717 -110943571 + AluJo SINE Alu 138 303 0 2077 147 0 0 chr10 34646405 34646697 -110942591 - AluSq SINE Alu -21 292 1 616 242 162 0 chr10 34646709 34647025 -110942263 - L1ME3A LINE L1 -9 6161 5742 1037 170 6 0 chr10 34647216 34647375 -110941913 + AluJb SINE Alu 145 304 -8 1653 205 0 13 chr10 34647490 34647802 -110941486 - AluJo SINE Alu -4 308 1 205 200 0 0 chr10 34647806 34647846 -110941442 + T-rich Low_complexity Low_complexity 1 40 0 6293 34 0 55 chr10 34647847 34648708 -110940580 - L1PA3 LINE L1 -5 6150 5337 753 70 0 0 chr10 34649304 34649404 -110939884 + (TTCC)n Simple_repeat Simple_repeat 1 100 0 1971 230 88 21 chr10 34649524 34649915 -110939373 + L1MC4 LINE L1 6462 6912 -1130 2543 68 0 0 chr10 34649915 34650225 -110939063 - AluY SINE Alu -1 310 1 1971 230 88 21 chr10 34650225 34650459 -110938829 + L1MC4 LINE L1 6912 7129 -913 1691 142 25 89 chr10 34650614 34650938 -110938350 + AluJo SINE Alu 1 303 -9 1777 153 13 32 chr10 34651168 34651293 -110937995 + AluSx SINE Alu 1 127 -185 414 0 0 0 chr10 34651293 34651339 -110937949 + (CAA)n Simple_repeat Simple_repeat 2 47 0 1777 153 13 32 chr10 34651339 34651521 -110937767 + AluSx SINE Alu 127 302 -10 223 186 23 0 chr10 34651552 34651595 -110937693 + GA-rich Low_complexity Low_complexity 1 44 0 239 299 69 23 chr10 34651838 34651925 -110937363 + L2 LINE L2 2807 2897 -375 2231 109 10 0 chr10 34652232 34652525 -110936763 - AluSx SINE Alu -16 296 1 391 292 97 0 chr10 34652543 34652656 -110936632 + L2 LINE L2 3134 3257 -15 738 268 128 13 chr10 34652991 34653226 -110936062 - MIR SINE MIR 0 262 1 2245 115 0 0 chr10 34653246 34653550 -110935738 + AluSg SINE Alu 2 305 -5 29 0 0 0 chr10 34653826 34653855 -110935433 + AT_rich Low_complexity Low_complexity 1 29 0 663 207 8 0 chr10 34653856 34653977 -110935311 - FLAM_A SINE Alu -11 122 1 2145 121 124 18 chr10 34654136 34654523 -110934765 - MSTA LTR MaLR 0 428 1 533 226 29 0 chr10 34655007 34655109 -110934179 - FLAM_A SINE Alu -37 105 1 263 332 45 61 chr10 34655109 34655356 -110933932 - L2 LINE L2 -40 3273 3031 2156 186 15 5 chr10 34655363 34655755 -110933533 + MSTD LTR MaLR 1 396 0 6164 240 59 27 chr10 34655758 34656223 -110933065 + MSTD-int LTR MaLR 2 451 -1284 2063 156 8 32 chr10 34656223 34656360 -110932928 - THE1B LTR MaLR 0 364 225 2179 136 0 0 chr10 34656360 34656668 -110932620 - AluSx SINE Alu -4 308 1 2063 156 8 32 chr10 34656668 34656903 -110932385 - THE1B LTR MaLR -139 225 1 6164 240 59 27 chr10 34656903 34657428 -110931860 + MSTD-int LTR MaLR 451 958 -777 2255 114 0 3 chr10 34657428 34657725 -110931563 - AluSx SINE Alu -16 296 1 6164 240 59 27 chr10 34657725 34658414 -110930874 + MSTD-int LTR MaLR 958 1735 0 1172 121 105 0 chr10 34658414 34658604 -110930684 + MSTD LTR MaLR 1 210 -186 613 261 82 5 chr10 34659011 34659195 -110930093 - L2 LINE L2 -312 3001 2804 200 227 0 0 chr10 34660085 34660129 -110929159 + (TA)n Simple_repeat Simple_repeat 1 44 0 186 71 0 0 chr10 34660255 34660283 -110929005 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 708 323 69 32 chr10 34660690 34661037 -110928251 + L3 LINE CR1 780 1139 -438 2000 128 0 0 chr10 34661368 34661675 -110927613 - AluSx SINE Alu 0 320 14 21 36 0 0 chr10 34661675 34661703 -110927585 + AT_rich Low_complexity Low_complexity 1 28 0 564 278 33 85 chr10 34661805 34662204 -110927084 - MLT1J2 LTR MaLR -69 381 4 373 336 9 18 chr10 34662405 34662515 -110926773 - L2 LINE L2 -27 3245 3137 417 335 48 55 chr10 34662902 34663192 -110926096 + L3 LINE CR1 1237 1524 -53 2271 65 28 0 chr10 34663202 34663492 -110925796 + AluY SINE Alu 1 298 -13 30 0 0 0 chr10 34663632 34663662 -110925626 + AT_rich Low_complexity Low_complexity 1 30 0 1368 133 13 0 chr10 34663958 34664191 -110925097 - Tigger5 DNA MER2_type 0 2323 2088 707 82 62 0 chr10 34664191 34664288 -110925000 - AluY SINE Alu -208 103 1 1889 149 0 39 chr10 34664288 34664597 -110924691 - AluJo SINE Alu -15 297 1 320 370 26 7 chr10 34665034 34665188 -110924100 + MIR SINE MIR 65 221 -41 2826 3 0 3 chr10 34665263 34665572 -110923716 + AluY SINE Alu 1 308 -3 198 0 0 0 chr10 34665572 34665594 -110923694 + (TA)n Simple_repeat Simple_repeat 2 23 0 1849 142 63 6 chr10 34665698 34666029 -110923259 - L1MB2 LINE L1 -1 6239 5890 36 0 0 0 chr10 34666963 34666999 -110922289 + AT_rich Low_complexity Low_complexity 1 36 0 2095 190 29 0 chr10 34667002 34667387 -110921901 - MSTD LTR MaLR 0 396 1 2477 225 82 50 chr10 34667696 34668994 -110920294 - L1MB2 LINE L1 -450 5785 4446 1174 257 2 37 chr10 34669001 34669433 -110919855 - L1MB2 LINE L1 -2118 4097 3681 2107 108 31 3 chr10 34669450 34669737 -110919551 - AluSx SINE Alu -17 295 1 5437 236 70 37 chr10 34669746 34670929 -110918359 - L1MB2 LINE L1 -2708 3507 2365 1854 184 22 19 chr10 34670929 34671293 -110917995 - MLT1A1 LTR MaLR 0 365 1 5437 236 70 37 chr10 34671293 34671443 -110917845 - L1MB2 LINE L1 -3850 2365 2221 1998 152 7 0 chr10 34671443 34671739 -110917549 - AluSx SINE Alu -14 298 1 5437 236 70 37 chr10 34671739 34672683 -110916605 - L1MB2 LINE L1 -3994 2221 1310 212 0 36 0 chr10 34672683 34672711 -110916577 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1834 154 7 3 chr10 34672714 34672999 -110916289 - AluSx SINE Alu -24 288 3 5437 236 70 37 chr10 34672999 34674110 -110915178 - L1MB2 LINE L1 -4906 1309 35 1795 171 10 16 chr10 34674151 34674460 -110914828 - AluJo SINE Alu -5 307 1 273 346 123 43 chr10 34674548 34674710 -110914578 - L2 LINE L2 0 3272 3098 2211 82 0 0 chr10 34675161 34675443 -110913845 - AluY SINE Alu -29 282 1 302 336 56 8 chr10 34675969 34676094 -110913194 + L2 LINE L2 3137 3267 -5 2472 70 7 0 chr10 34676204 34676502 -110912786 - AluSx SINE Alu -12 300 1 26 30 0 0 chr10 34676563 34676596 -110912692 + AT_rich Low_complexity Low_complexity 1 33 0 357 345 31 18 chr10 34676757 34676983 -110912305 - L1MC4a LINE L1 -1940 5868 5640 820 152 0 51 chr10 34677040 34677178 -110912110 + AluSq/x SINE Alu 1 131 -181 26 30 0 0 chr10 34677313 34677346 -110911942 + AT_rich Low_complexity Low_complexity 1 33 0 2320 110 0 0 chr10 34677406 34677706 -110911582 + AluSx SINE Alu 1 300 -12 301 327 19 0 chr10 34677706 34677832 -110911456 - L1MC4a LINE L1 -535 5586 5460 24 0 0 0 chr10 34677853 34677877 -110911411 + AT_rich Low_complexity Low_complexity 1 24 0 732 289 92 33 chr10 34677877 34678518 -110910770 - L1MC4a LINE L1 -650 5471 4762 7420 175 10 15 chr10 34678528 34680976 -110908312 - L1MA7 LINE L1 0 6291 3899 2179 123 0 19 chr10 34680976 34681294 -110907994 - AluJb SINE Alu 0 312 1 7420 175 10 15 chr10 34681294 34681511 -110907777 - L1MA7 LINE L1 -2392 3899 3682 13965 136 22 25 chr10 34681545 34681726 -110907562 - Tigger1 DNA MER2_type 0 2418 2238 2282 115 0 13 chr10 34681726 34682039 -110907249 + AluSx SINE Alu 1 309 -3 13965 136 22 25 chr10 34682039 34682807 -110906481 - Tigger1 DNA MER2_type -180 2238 1470 2298 85 7 26 chr10 34682807 34683113 -110906175 - AluSp SINE Alu -13 300 1 13965 136 22 25 chr10 34683113 34683626 -110905662 - Tigger1 DNA MER2_type -948 1470 957 1790 188 0 25 chr10 34683626 34683946 -110905342 + AluJo SINE Alu 1 312 0 13965 136 22 25 chr10 34683946 34684905 -110904383 - Tigger1 DNA MER2_type -1461 957 1 1226 271 44 7 chr10 34685051 34685461 -110903827 - L1ME1 LINE L1 -2 6164 5740 306 219 62 47 chr10 34685478 34685606 -110903682 - L1ME1 LINE L1 -1001 5145 5016 678 307 72 20 chr10 34685626 34685975 -110903313 - LTR16B LTR ERVL 0 464 98 355 301 58 33 chr10 34686177 34686580 -110902708 - HERV16 LTR ERVL -306 4690 4568 * 1460 353 38 15 chr10 34686575 34687515 -110901773 - HERV16 LTR ERVL -1314 4340 3379 2389 74 0 3 chr10 34687516 34687813 -110901475 - AluY SINE Alu -15 296 1 701 308 45 50 chr10 34687830 34687985 -110901303 + HERVL LTR ERVL 2794 2948 -2706 808 221 97 9 chr10 34687985 34688202 -110901086 - MER106A DNA MER1_type 0 236 1 701 308 45 50 chr10 34688202 34688468 -110900820 + HERVL LTR ERVL 2948 3213 -2441 459 205 128 0 chr10 34688482 34688599 -110900689 + MER96 DNA MER1_type? 44 175 0 288 143 0 0 chr10 34688663 34688719 -110900569 - L1M4 LINE L1 -1090 5056 5001 1404 244 103 19 chr10 34688739 34689214 -110900074 + LTR40a LTR ERVL 1 515 -4 1165 272 93 72 chr10 34689219 34689778 -110899510 + HERVL40 LTR ERVL 1 571 -4959 591 253 88 53 chr10 34689933 34690143 -110899145 + HERVL40 LTR ERVL 2153 2189 -848 210 37 0 0 chr10 34690143 34690170 -110899118 + (GA)n Simple_repeat Simple_repeat 2 28 0 591 253 88 53 chr10 34690170 34690337 -110898951 + HERVL40 LTR ERVL 2189 2349 -688 1030 231 15 0 chr10 34690782 34691055 -110898233 - L1M4 LINE L1 -1420 4726 4450 2420 251 24 30 chr10 34691058 34691816 -110897472 - L1MEc LINE L1 -5610 786 34 274 167 0 19 chr10 34691820 34691874 -110897414 - L1MEc LINE L1 -6317 79 27 1233 243 56 42 chr10 34691914 34692487 -110896801 - L1ME1 LINE L1 -1137 5009 4429 971 223 45 0 chr10 34692480 34692722 -110896566 - L1ME1 LINE L1 -1926 4220 3968 * 240 188 141 70 chr10 34693243 34693304 -110895984 - L1ME3A LINE L1 -7 6163 6108 2360 96 3 0 chr10 34693304 34693606 -110895682 - AluSx SINE Alu -9 303 1 240 188 141 70 chr10 34693606 34693672 -110895616 - L1ME3A LINE L1 -62 6108 6027 292 191 59 29 chr10 34693716 34693784 -110895504 - MER63 DNA MER1_type -1 1060 991 25 0 0 0 chr10 34693970 34693995 -110895293 + AT_rich Low_complexity Low_complexity 1 25 0 248 294 15 0 chr10 34695162 34695230 -110894058 + MIR SINE MIR 147 215 -47 497 118 0 11 chr10 34695338 34695431 -110893857 + (TCCC)n Simple_repeat Simple_repeat 3 94 0 844 276 104 32 chr10 34695464 34695869 -110893419 + L2 LINE L2 1659 2092 -1222 2172 107 3 7 chr10 34696071 34696369 -110892919 + AluSq SINE Alu 1 297 -16 35 0 0 0 chr10 34696748 34696783 -110892505 + AT_rich Low_complexity Low_complexity 1 35 0 2134 126 3 3 chr10 34697629 34697939 -110891349 - AluSg SINE Alu 0 310 1 1942 183 11 19 chr10 34698138 34698504 -110890784 + MLT1A1 LTR MaLR 3 365 0 1048 200 24 13 chr10 34698504 34698918 -110890370 - MLT1C LTR MaLR -12 455 1 377 226 23 66 chr10 34699600 34699762 -110889526 + MIR SINE MIR 4 161 -65 2263 186 110 4 chr10 34700395 34700894 -110888394 - MER68 LTR ERV1 0 562 11 2111 132 3 0 chr10 34700915 34701210 -110888078 - AluSx SINE Alu -16 296 1 32 43 0 0 chr10 34701719 34701765 -110887523 + AT_rich Low_complexity Low_complexity 1 46 0 29 0 0 0 chr10 34701945 34701974 -110887314 + AT_rich Low_complexity Low_complexity 1 29 0 2378 237 25 16 chr10 34702104 34702738 -110886550 + L1ME1 LINE L1 5445 6084 -82 1229 111 21 0 chr10 34702851 34703041 -110886247 + L1PA16 LINE L1 5970 6163 -3 1371 302 71 28 chr10 34703120 34703626 -110885662 + L2 LINE L2 708 1235 -2079 297 0 0 0 chr10 34703733 34703766 -110885522 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 1988 139 0 7 chr10 34703768 34704070 -110885218 - AluSx SINE Alu -12 300 1 27 29 0 0 chr10 34704923 34704957 -110884331 + AT_rich Low_complexity Low_complexity 1 34 0 5166 159 20 28 chr10 34705320 34706890 -110882398 - L1MA5 LINE L1 -6 6294 4743 267 79 0 0 chr10 34706897 34706935 -110882353 + (TG)n Simple_repeat Simple_repeat 1 38 0 1135 146 0 27 chr10 34706936 34707121 -110882167 - AluJo SINE Alu -14 298 119 1539 188 23 50 chr10 34707121 34707700 -110881588 - L1M4 LINE L1 -1413 4733 4194 335 313 49 6 chr10 34707905 34708068 -110881220 - L1M4 LINE L1 -6282 260 91 243 0 0 0 chr10 34708100 34708127 -110881161 + (T)n Simple_repeat Simple_repeat 1 27 0 358 320 24 36 chr10 34708141 34708394 -110880894 + L1M4 LINE L1 4598 4847 -1299 716 209 27 32 chr10 34709202 34709389 -110879899 - MER5A DNA MER1_type -1 188 3 1748 141 0 3 chr10 34709613 34709904 -110879384 - MER47A DNA MER2_type -2 364 75 312 276 0 31 chr10 34710153 34710231 -110879057 - L1MC4 LINE L1 -1340 6702 6626 2485 75 0 0 chr10 34710231 34710525 -110878763 - AluSp SINE Alu -19 294 1 312 276 0 31 chr10 34710525 34710544 -110878744 - L1MC4 LINE L1 -1416 6626 6608 1521 188 36 14 chr10 34710600 34710876 -110878412 + AluJo SINE Alu 1 282 -30 28 29 0 0 chr10 34710894 34710929 -110878359 + AT_rich Low_complexity Low_complexity 1 35 0 426 321 117 0 chr10 34712542 34712738 -110876550 + L2 LINE L2 692 910 -2404 269 344 29 48 chr10 34712788 34712950 -110876338 + L2 LINE L2 1428 1587 -1727 1635 169 7 17 chr10 34712950 34713264 -110876024 - AluJb SINE Alu 0 311 1 269 344 29 48 chr10 34713264 34713372 -110875916 + L2 LINE L2 1587 1695 -1619 1071 345 95 16 chr10 34713780 34714519 -110874769 + L2 LINE L2 1815 2611 -703 3265 109 0 6 chr10 34714717 34715196 -110874092 - L1PA14 LINE L1 0 6161 5686 23379 53 10 2 chr10 34715312 34718990 -110870298 + L1PA5 LINE L1 2174 5874 -280 16300 67 9 6 chr10 34719090 34721424 -110867864 - L1P LINE L1 -2819 3327 988 17010 56 18 0 chr10 34721526 34723824 -110865464 + L1P LINE L1 437 2775 -3371 2003 81 44 7 chr10 34723824 34724096 -110865192 + AluY SINE Alu 1 282 -29 2956 153 40 13 chr10 34724196 34724988 -110864300 - L1M2 LINE L1 -697 5594 4783 18422 58 7 3 chr10 34725005 34728203 -110861085 - L1PA7 LINE L1 -13 6141 2934 6405 153 9 15 chr10 34728303 34728646 -110860642 - L1P4 LINE L1 -504 5664 5321 2164 92 7 36 chr10 34728646 34728951 -110860337 - AluSx SINE Alu -16 296 1 6405 153 9 15 chr10 34728951 34730187 -110859101 - L1P4 LINE L1 -847 5321 4086 213 367 112 24 chr10 34730191 34730360 -110858928 + MER5A DNA MER1_type 2 185 -4 798 231 77 118 chr10 34730696 34731504 -110857784 - LTR41 LTR ERVL 0 795 8 407 224 172 0 chr10 34732929 34733045 -110856243 - MER3 DNA MER1_type 0 209 74 764 274 39 47 chr10 34733448 34733703 -110855585 - MIR SINE MIR -4 258 6 22 70 0 0 chr10 34734085 34734128 -110855160 + AT_rich Low_complexity Low_complexity 1 43 0 1736 170 7 10 chr10 34734128 34734434 -110854854 - AluJo SINE Alu -6 306 2 2381 80 6 46 chr10 34735751 34736076 -110853212 - AluSx SINE Alu 0 312 1 480 243 88 17 chr10 34736814 34736995 -110852293 - L1MEc LINE L1 -6167 229 36 6314 203 45 25 chr10 34737427 34738754 -110850534 - L1MC2 LINE L1 -9 6335 5036 2227 80 25 0 chr10 34738754 34739040 -110850248 - AluSg SINE Alu -17 293 1 6314 203 45 25 chr10 34739040 34740693 -110848595 - L1MC2 LINE L1 -1308 5036 3295 6415 189 56 81 chr10 34740697 34741856 -110847432 - L1 LINE L1 -1932 4450 3264 195 42 0 0 chr10 34741856 34741880 -110847408 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 808 221 7 0 chr10 34741880 34742025 -110847263 - FRAM SINE Alu -30 146 1 6415 189 56 81 chr10 34742025 34742951 -110846337 - L1 LINE L1 -3116 3266 2272 1557 253 64 58 chr10 34742959 34743746 -110845542 - L1 LINE L1 -4299 2083 1219 761 139 0 0 chr10 34743746 34743868 -110845420 - L1PB4 LINE L1 -7 6149 6028 1557 253 64 58 chr10 34743868 34744067 -110845221 - L1 LINE L1 -5163 1219 1023 * 40668 51 4 1 chr10 34744038 34750173 -110839115 - L1PA4 LINE L1 -1 6390 237 848 154 11 6 chr10 34750174 34750349 -110838939 - L1M3c LINE L1 -4835 2263 2088 415 325 19 24 chr10 34750350 34750562 -110838726 - L1M3c LINE L1 -5221 1947 1737 257 323 32 25 chr10 34751707 34751865 -110837423 - L1M3c LINE L1 -5981 1117 959 2406 61 0 7 chr10 34752054 34752349 -110836939 + AluY SINE Alu 1 293 -18 324 309 149 11 chr10 34753132 34753307 -110835981 + MIR SINE MIR 61 259 -3 22 35 0 0 chr10 34753557 34753586 -110835702 + AT_rich Low_complexity Low_complexity 1 29 0 3316 144 29 15 chr10 34753784 34754402 -110834886 + L1MB2 LINE L1 5544 6170 -1 4134 156 76 32 chr10 34754485 34755931 -110833357 - L1MA7 LINE L1 0 6291 4783 26787 78 7 3 chr10 34755939 34760643 -110828645 - L1PA7 LINE L1 -3 6151 1433 9804 62 4 78 chr10 34761138 34762580 -110826708 - SVA Other Other 0 1386 52 234 0 0 0 chr10 34762580 34762606 -110826682 + (GGGAGA)n Simple_repeat Simple_repeat 1 26 0 5868 130 53 23 chr10 34762606 34764052 -110825236 - L1PA7 LINE L1 -4686 1460 13 9691 190 40 41 chr10 34764058 34765655 -110823633 - L1MA7 LINE L1 -1351 4795 3198 2414 71 14 0 chr10 34765655 34765952 -110823336 - AluY SINE Alu -10 301 1 9691 190 40 41 chr10 34765952 34766708 -110822580 - L1MA7 LINE L1 -2948 3198 2443 254 25 0 50 chr10 34766708 34766748 -110822540 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 7261 71 12 213 chr10 34766748 34768393 -110820895 - SVA Other Other -23 1363 51 180 0 0 0 chr10 34768396 34768416 -110820872 + (GGGAGA)n Simple_repeat Simple_repeat 1 20 0 9691 190 40 41 chr10 34768416 34768573 -110820715 - L1MA7 LINE L1 -3704 2442 2286 2122 74 0 0 chr10 34768573 34768830 -110820458 - AluSc SINE Alu -52 257 1 9691 190 40 41 chr10 34768830 34768995 -110820293 - L1MA7 LINE L1 -3860 2286 2116 2055 137 3 0 chr10 34768997 34769289 -110819999 - AluSx SINE Alu -19 293 1 3204 177 40 52 chr10 34769303 34770156 -110819132 + L1MA10 LINE L1 3875 4717 -1429 2221 97 0 32 chr10 34770162 34770471 -110818817 - AluSx SINE Alu -12 300 2 1000 112 0 0 chr10 34770472 34770606 -110818682 - AluSx SINE Alu -10 302 169 471 145 0 0 chr10 34770606 34770675 -110818613 - AluSx SINE Alu -244 69 1 2993 209 94 28 chr10 34770678 34772155 -110817133 + L1MA10 LINE L1 4722 6298 -36 23 0 0 0 chr10 34772630 34772653 -110816635 + AT_rich Low_complexity Low_complexity 1 23 0 419 283 134 24 chr10 34774054 34774671 -110814617 + L1ME LINE L1 4932 5712 -458 6676 208 41 24 chr10 34774735 34775725 -110813563 + L1MC4a LINE L1 3330 4302 -1876 1712 224 58 13 chr10 34775725 34776172 -110813116 + MLT1C LTR MaLR 1 467 0 6676 208 41 24 chr10 34776172 34776363 -110812925 + L1MC4a LINE L1 4302 4488 -1690 1716 162 17 26 chr10 34776363 34776665 -110812623 - AluJo SINE Alu -13 299 1 6676 208 41 24 chr10 34776665 34777080 -110812208 + L1MC4a LINE L1 4488 4894 -1284 2357 70 13 0 chr10 34777080 34777378 -110811910 - AluY SINE Alu -9 302 1 6676 208 41 24 chr10 34777378 34777826 -110811462 + L1MC4a LINE L1 4894 5333 -845 2266 110 0 0 chr10 34777826 34778127 -110811161 - AluSx SINE Alu -11 301 1 6676 208 41 24 chr10 34778127 34778522 -110810766 + L1MC4a LINE L1 5333 5815 -363 323 283 7 3 chr10 34778597 34778747 -110810541 + MER58A DNA MER1_type 6 203 -21 368 272 59 15 chr10 34778756 34778892 -110810396 + L1MC4a LINE L1 5792 5933 -1875 1896 26 0 13 chr10 34779089 34779321 -110809967 + L1PA4 LINE L1 5924 6152 -3 18926 165 42 11 chr10 34781125 34784803 -110804485 - L1MA2 LINE L1 0 7723 4159 2070 123 0 10 chr10 34784803 34785103 -110804185 + AluSx SINE Alu 1 297 -15 18926 165 42 11 chr10 34785103 34786640 -110802648 - L1MA2 LINE L1 -3564 4159 2670 1182 64 6 0 chr10 34786640 34786797 -110802491 + L1PA6 LINE L1 5997 6154 0 18926 165 42 11 chr10 34786797 34789042 -110800246 - L1MA2 LINE L1 -5053 2670 19 254 250 69 9 chr10 34789404 34789416 -110799872 - L1MA5 LINE L1 0 6300 6289 12470 186 35 46 chr10 34789416 34789801 -110799487 - L1PB4 LINE L1 0 6858 6470 2622 73 20 6 chr10 34789801 34790159 -110799129 - L1PB1 LINE L1 0 6151 5789 12470 186 35 46 chr10 34790159 34790543 -110798745 - L1PB4 LINE L1 -388 6470 6083 228 35 0 0 chr10 34790543 34790572 -110798716 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 2023 127 3 3 chr10 34790575 34790859 -110798429 - AluSg SINE Alu -26 284 1 12470 186 35 46 chr10 34790859 34792668 -110796620 - L1PB4 LINE L1 -777 6081 4253 1724 200 0 3 chr10 34792668 34792963 -110796325 - AluJb SINE Alu -18 294 1 12470 186 35 46 chr10 34792963 34794786 -110794502 - L1PB4 LINE L1 -2605 4253 2551 297 0 0 0 chr10 34794786 34794819 -110794469 + (CA)n Simple_repeat Simple_repeat 2 34 0 12470 186 35 46 chr10 34794819 34796754 -110792534 - L1PB4 LINE L1 -4307 2551 595 3325 166 79 56 chr10 34796874 34797608 -110791680 - MER4E LTR ERV1 -26 753 3 785 288 43 43 chr10 34797671 34798046 -110791242 + LTR38 LTR ERV1 129 503 -53 15798 185 54 19 chr10 34798053 34802641 -110786647 - L1PA15 LINE L1 -11 6154 1407 352 330 48 9 chr10 34803423 34803653 -110785635 - L1PB4 LINE L1 -6599 250 12 2342 96 0 3 chr10 34803890 34804193 -110785095 + AluSx SINE Alu 1 302 -10 21 0 0 0 chr10 34804442 34804463 -110784825 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr10 34805417 34805439 -110783849 + AT_rich Low_complexity Low_complexity 1 22 0 213 108 0 0 chr10 34805942 34805979 -110783309 + (TG)n Simple_repeat Simple_repeat 2 38 0 187 344 0 16 chr10 34806154 34806218 -110783070 + MIR SINE MIR 69 131 -131 2120 128 0 0 chr10 34807163 34807468 -110781820 + AluSx SINE Alu 1 305 -7 1279 238 102 83 chr10 34808192 34808579 -110780709 - MLT1E1 LTR MaLR -1 653 248 1590 178 3 31 chr10 34808579 34808866 -110780422 - AluJo SINE Alu -33 279 1 1279 238 102 83 chr10 34808866 34809116 -110780172 - MLT1E1 LTR MaLR -406 248 4 26 39 0 20 chr10 34809119 34809142 -110780146 + AT_rich Low_complexity Low_complexity 1 23 -27 1219 86 6 0 chr10 34809142 34809316 -110779972 - L1MA3 LINE L1 -1 6304 6130 26 39 0 20 chr10 34809316 34809343 -110779945 + AT_rich Low_complexity Low_complexity 23 50 0 1457 132 0 0 chr10 34809343 34809570 -110779718 - L1PB1 LINE L1 -8 6859 6633 3242 133 18 36 chr10 34809585 34810141 -110779147 - LTR10A LTR ERV1 -63 546 1 15146 187 22 4 chr10 34810185 34815307 -110773981 - L1PB1 LINE L1 -230 6637 1427 450 141 0 0 chr10 34815324 34815395 -110773893 - L1PB1 LINE L1 -5700 1163 1093 2674 243 72 14 chr10 34815397 34816283 -110773005 - L1PB1 LINE L1 -5816 1047 110 * 3396 108 40 6 chr10 34816260 34816788 -110772500 - L1MA3 LINE L1 -160 6861 6316 2261 102 0 0 chr10 34816789 34817083 -110772205 - AluSc SINE Alu -15 294 1 290 245 63 31 chr10 34817280 34817432 -110771856 - MLT1H LTR MaLR 0 586 428 545 282 60 34 chr10 34817432 34817666 -110771622 - MLT1H LTR MaLR -227 322 83 390 268 71 24 chr10 34817789 34817957 -110771331 - MLT1J LTR MaLR -2 509 334 2154 269 61 40 chr10 34818721 34819235 -110770053 - L1ME LINE L1 -4715 1365 863 1532 180 14 32 chr10 34819235 34819518 -110769770 - AluJo SINE Alu -20 292 15 2154 269 61 40 chr10 34819518 34820215 -110769073 - L1ME LINE L1 -5217 863 129 43913 36 6 3 chr10 34820217 34826354 -110762934 + L1PA3 LINE L1 1 6154 -1 843 173 12 36 chr10 34826365 34826533 -110762755 + FRAM SINE Alu 1 161 -15 359 261 130 0 chr10 34826545 34826660 -110762628 - L1ME LINE L1 -5935 135 6 22 0 0 0 chr10 34827315 34827337 -110761951 + AT_rich Low_complexity Low_complexity 1 22 0 404 305 102 28 chr10 34827783 34828147 -110761141 + L1ME4a LINE L1 5533 5923 -198 1314 181 0 9 chr10 34828168 34828394 -110760894 + AluJb SINE Alu 1 224 -88 233 167 56 0 chr10 34828408 34828534 -110760754 + (TA)n Simple_repeat Simple_repeat 1 133 0 224 40 80 0 chr10 34828581 34828631 -110760657 + (TA)n Simple_repeat Simple_repeat 2 55 0 2357 87 0 0 chr10 34829546 34829844 -110759444 - AluSc SINE Alu -11 298 1 215 284 177 21 chr10 34830288 34830429 -110758859 - MIR SINE MIR -71 191 29 2269 122 0 3 chr10 34830955 34831267 -110758021 - AluSq SINE Alu -2 311 1 225 121 0 0 chr10 34831345 34831378 -110757910 - L1PA7 LINE L1 -12 6142 6110 423 334 132 31 chr10 34831393 34831839 -110757449 + L2 LINE L2 2026 2516 -798 885 303 102 25 chr10 34831986 34832379 -110756909 - MLT1J1 LTR MaLR -23 423 1 2199 93 10 20 chr10 34832546 34832848 -110756440 - AluSx SINE Alu -13 299 1 250 216 40 27 chr10 34833062 34833136 -110756152 + MER41B LTR ERV1 478 552 -83 31 26 0 0 chr10 34833611 34833649 -110755639 + AT_rich Low_complexity Low_complexity 1 38 0 2399 90 0 3 chr10 34834406 34834717 -110754571 - AluSq SINE Alu -3 310 1 392 333 22 15 chr10 34835353 34835488 -110753800 - L2 LINE L2 -15 3257 3122 194 93 0 47 chr10 34835845 34835888 -110753400 + (TTATA)n Simple_repeat Simple_repeat 4 44 0 351 320 101 28 chr10 34836464 34836711 -110752577 - L2 LINE L2 -4 3309 3045 1360 221 0 0 chr10 34838087 34838354 -110750934 - AluJb SINE Alu -9 303 37 2023 100 44 4 chr10 34838620 34838913 -110750375 + AluSg SINE Alu 1 304 0 3562 132 11 4 chr10 34839810 34840333 -110748955 - MER1A DNA MER1_type 0 527 1 632 237 79 0 chr10 34841077 34841229 -110748059 - MER68 LTR ERV1 0 562 399 389 321 76 43 chr10 34841678 34841955 -110747333 - L3b LINE CR1 -196 1387 1102 393 141 0 0 chr10 34842944 34843015 -110746273 + (TCC)n Simple_repeat Simple_repeat 3 73 0 306 0 0 0 chr10 34843646 34843680 -110745608 + (TA)n Simple_repeat Simple_repeat 1 34 0 2417 83 10 0 chr10 34846015 34846317 -110742971 + AluSg SINE Alu 1 305 -5 2514 58 0 0 chr10 34846617 34846912 -110742376 - AluY SINE Alu -16 295 1 7028 56 1 1 chr10 34846915 34848391 -110740897 - L1PA7 LINE L1 -2 6152 4678 836 111 52 52 chr10 34848596 34848768 -110740520 - L1MB4 LINE L1 -15 6165 5994 1845 201 48 16 chr10 34848768 34849142 -110740146 - MSTD LTR MaLR -10 386 1 2738 228 41 21 chr10 34849151 34849410 -110739878 - L1M4c LINE L1 -1842 4802 4550 1763 168 103 28 chr10 34849410 34849808 -110739480 + MSTC LTR MaLR 1 428 0 2738 228 41 21 chr10 34849808 34850393 -110738895 - L1M4c LINE L1 -2094 4550 3941 3576 89 44 12 chr10 34850413 34850976 -110738312 - L1MA3 LINE L1 -7 6298 5718 7865 130 27 41 chr10 34850982 34851859 -110737429 - L1M4 LINE L1 -3382 4183 3295 186 103 0 0 chr10 34851859 34851888 -110737400 + (CAA)n Simple_repeat Simple_repeat 2 30 0 7865 130 27 41 chr10 34851888 34852909 -110736379 - L1M4 LINE L1 -4270 3295 2306 1109 77 53 68 chr10 34853011 34853218 -110736070 + L1M1 LINE L1 3266 3469 -4096 * 1599 171 30 0 chr10 34853211 34853475 -110735813 - L1M4 LINE L1 -6195 1370 1099 650 134 42 8 chr10 34853472 34853591 -110735697 - L1M4 LINE L1 -7432 133 11 * 1189 220 84 21 chr10 34853593 34854106 -110735182 - L1M4c LINE L1 -2687 4878 4334 * 39067 75 14 2 chr10 34854095 34860167 -110729121 - L1PA5 LINE L1 -6 6148 2 2463 233 70 28 chr10 34860171 34861201 -110728087 - L1P LINE L1 -1103 5279 4293 835 167 13 13 chr10 34861201 34861357 -110727931 - L1PB3 LINE L1 -2 6152 5997 2463 233 70 28 chr10 34861357 34862127 -110727161 - L1P LINE L1 -2089 4293 2132 1647 223 52 9 chr10 34862127 34862650 -110726638 - L1M4c LINE L1 -4252 3315 2674 1725 147 8 0 chr10 34862658 34862910 -110726378 - AluSx SINE Alu -58 254 1 372 242 38 32 chr10 34862918 34863075 -110726213 - L1M4c LINE L1 -6380 1083 926 6126 64 7 75 chr10 34863075 34863962 -110725326 + LTR12 LTR ERV1 1 826 0 317 202 58 39 chr10 34863962 34864066 -110725222 - L1M4c LINE L1 -6435 1028 923 25 0 0 0 chr10 34864122 34864147 -110725141 + AT_rich Low_complexity Low_complexity 1 25 0 577 241 133 0 chr10 34864169 34864327 -110724961 + MIR SINE MIR 53 231 -31 13032 190 38 14 chr10 34864367 34866484 -110722804 - L1MA4A LINE L1 -12 6291 4224 1952 185 83 5 chr10 34866484 34866879 -110722409 + MSTB LTR MaLR 1 426 0 9146 154 45 4 chr10 34866879 34867383 -110721905 + MSTB-int LTR MaLR 1 483 -1168 198 0 0 0 chr10 34867383 34867405 -110721883 + (GAAAA)n Simple_repeat Simple_repeat 5 26 0 9146 154 45 4 chr10 34867405 34868486 -110720802 + MSTB-int LTR MaLR 483 1651 0 2197 176 60 2 chr10 34868486 34868889 -110720399 + MSTB LTR MaLR 1 426 0 13032 190 38 14 chr10 34868889 34870079 -110719209 - L1MA4A LINE L1 -2079 4224 2866 2028 133 3 0 chr10 34870079 34870380 -110718908 - AluSx SINE Alu -7 305 4 13032 190 38 14 chr10 34870380 34871140 -110718148 - L1MA4A LINE L1 -3437 2866 2125 1913 120 25 0 chr10 34871142 34871425 -110717863 + MSTA LTR MaLR 1 290 -138 596 276 0 0 chr10 34871418 34871545 -110717743 - Tigger7 DNA MER2_type -275 275 149 * 297 109 0 0 chr10 34871553 34871599 -110717689 + (TG)n Simple_repeat Simple_repeat 1 46 0 2486 72 0 0 chr10 34871642 34871946 -110717342 - AluY SINE Alu -7 304 1 22286 89 11 15 chr10 34871971 34876079 -110713209 - L1PA7 LINE L1 -7 6147 2059 581 177 146 0 chr10 34876084 34876214 -110713074 - L1PB4 LINE L1 -28 6128 5980 325 315 110 7 chr10 34876220 34876366 -110712922 + L1M4 LINE L1 1296 1456 -5753 6390 222 102 35 chr10 34876368 34880644 -110708644 - L1PB4 LINE L1 -180 6679 1979 267 274 44 22 chr10 34880793 34880928 -110708360 + L1M4 LINE L1 5274 5411 -1797 22 0 0 0 chr10 34881009 34881031 -110708257 + AT_rich Low_complexity Low_complexity 1 22 0 259 233 68 0 chr10 34881145 34881218 -110708070 + L1M4 LINE L1 5817 5894 -1314 1239 150 5 45 chr10 34881218 34881438 -110707850 - AluJo SINE Alu -101 211 1 2208 133 0 0 chr10 34881450 34881751 -110707537 - AluSx SINE Alu -11 301 1 403 271 25 8 chr10 34882567 34882689 -110706599 - MER94 DNA DNA -10 124 1 2505 140 30 137 chr10 34882942 34883519 -110705769 - MLT2B2 LTR ERVL 0 515 1 1024 209 43 0 chr10 34884105 34884315 -110704973 - MER20 DNA MER1_type 0 219 1 30 69 0 0 chr10 34884365 34884423 -110704865 + AT_rich Low_complexity Low_complexity 1 58 0 * 316 235 3 26 chr10 34884403 34884498 -110704790 + L1M4 LINE L1 3781 3874 -2272 788 271 77 77 chr10 34885073 34885159 -110704129 + L2 LINE L2 2359 2444 -870 2193 182 32 7 chr10 34885159 34885571 -110703717 - MSTB LTR MaLR -4 422 1 788 271 77 77 chr10 34885571 34885872 -110703416 + L2 LINE L2 2443 2746 -568 273 273 50 10 chr10 34886085 34886184 -110703104 - MLT1J LTR MaLR -73 438 336 1844 218 57 55 chr10 34886285 34886901 -110702387 - L1 LINE L1 -746 5400 4784 22 0 0 0 chr10 34886901 34886923 -110702365 + AT_rich Low_complexity Low_complexity 1 22 0 30 0 0 0 chr10 34886952 34886982 -110702306 + AT_rich Low_complexity Low_complexity 1 30 0 12722 193 39 12 chr10 34886982 34890862 -110698426 - L1MA7 LINE L1 0 6877 2894 836 299 26 15 chr10 34890859 34891130 -110698158 - L1MA7 LINE L1 -5465 1188 915 * 226 344 11 11 chr10 34891343 34891433 -110697855 - L1MA7 LINE L1 -6283 370 281 738 292 164 31 chr10 34891448 34891801 -110697487 - L1M3de LINE L1 -5634 1019 620 265 200 40 0 chr10 34891807 34891882 -110697406 + L1MC4 LINE L1 6624 6701 -1341 682 287 58 0 chr10 34892041 34892264 -110697024 + L1 LINE L1 2478 2713 -3433 539 251 271 40 chr10 34892350 34892653 -110696635 + MLT1G LTR MaLR 14 386 -204 3218 230 96 39 chr10 34892653 34893878 -110695410 - L1MEc LINE L1 -962 5253 3960 1604 240 33 52 chr10 34893945 34894586 -110694702 - L1MEc LINE L1 -2991 3224 2596 357 197 0 0 chr10 34894599 34894665 -110694623 - MER76 LTR ERV -622 66 1 246 105 0 0 chr10 34894732 34894770 -110694518 + (CA)n Simple_repeat Simple_repeat 1 38 0 571 292 21 21 chr10 34894793 34895033 -110694255 - L1MC4a LINE L1 -1192 6616 6377 414 185 0 0 chr10 34895199 34895280 -110694008 + (TG)n Simple_repeat Simple_repeat 2 82 0 242 242 133 76 chr10 34895285 34895587 -110693701 - L1MC4a LINE L1 -1637 6171 5853 2301 104 0 0 chr10 34895924 34896221 -110693067 - AluSg SINE Alu -13 297 1 23 54 0 0 chr10 34896697 34896734 -110692554 + AT_rich Low_complexity Low_complexity 1 37 0 290 312 26 11 chr10 34896816 34897005 -110692283 - L1MEc LINE L1 -3572 2643 2452 520 191 0 0 chr10 34897050 34897139 -110692149 + FLAM_C SINE Alu 22 110 -33 203 0 68 45 chr10 34897150 34897194 -110692094 + (CAAAA)n Simple_repeat Simple_repeat 2 46 0 239 272 75 43 chr10 34897199 34897453 -110691835 - L1MEc LINE L1 -3937 2459 2198 41320 48 6 27 chr10 34897755 34901156 -110688132 - L1PA4 LINE L1 0 6155 2942 2132 77 42 7 chr10 34901156 34901443 -110687845 - AluY SINE Alu -14 297 1 41320 48 6 27 chr10 34901443 34904321 -110684967 - L1PA4 LINE L1 -3213 2942 7 27 0 0 0 chr10 34904452 34904479 -110684809 + AT_rich Low_complexity Low_complexity 1 27 0 552 293 53 33 chr10 34904607 34905058 -110684230 - L1M4 LINE L1 -3570 2576 2117 33 73 0 0 chr10 34905352 34905420 -110683868 + AT_rich Low_complexity Low_complexity 1 68 0 2308 179 30 18 chr10 34905581 34906065 -110683223 - L1MA6 LINE L1 0 6300 5808 1822 163 25 31 chr10 34906065 34906422 -110682866 + THE1A LTR MaLR 1 355 0 2308 179 30 18 chr10 34906422 34906440 -110682848 - L1MA6 LINE L1 -492 5808 5792 641 89 0 11 chr10 34906440 34906530 -110682758 + MSTA LTR MaLR 340 428 0 1519 150 11 4 chr10 34906530 34906803 -110682485 + L1M1 LINE L1 5308 5582 -721 * 5280 198 22 18 chr10 34906794 34908090 -110681198 - L1 LINE L1 -2250 3896 2596 5137 137 12 0 chr10 34908093 34908741 -110680547 - L1PA16 LINE L1 -1 6165 5526 1860 155 0 10 chr10 34908741 34909037 -110680251 + AluSx SINE Alu 1 293 -19 5137 137 12 0 chr10 34909037 34910016 -110679272 - L1PA16 LINE L1 -640 5526 4537 2908 93 7 14 chr10 34910017 34910436 -110678852 - L1PA11 LINE L1 -457 5717 5302 3116 116 17 4 chr10 34910436 34910906 -110678382 + L1PA11 LINE L1 5694 6174 0 3150 247 26 13 chr10 34910906 34911969 -110677319 - L1PA12 LINE L1 -4313 3271 2182 243 368 11 0 chr10 34912216 34912311 -110676977 - L1PA12 LINE L1 -5401 2180 2085 779 346 48 46 chr10 34912434 34913043 -110676245 - L1PA12 LINE L1 -6177 1397 788 3323 98 8 0 chr10 34913048 34913530 -110675758 - LTR19A LTR ERV1 0 486 1 2878 219 46 11 chr10 34913538 34914717 -110674571 - L1 LINE L1 -3537 4028 2804 1167 242 89 58 chr10 34914731 34915193 -110674095 - L1 LINE L1 -7069 496 21 4858 238 44 33 chr10 34915348 34916842 -110672446 - L1M4 LINE L1 -4839 2624 1114 1579 178 45 32 chr10 34916878 34917092 -110672196 - L1M2 LINE L1 -739 5573 5363 1846 142 0 62 chr10 34917092 34917416 -110671872 - AluSx SINE Alu -8 304 1 1579 178 45 32 chr10 34917416 34917735 -110671553 - L1M2 LINE L1 -949 5363 5024 1806 148 21 33 chr10 34917744 34917915 -110671373 + L1MA9 LINE L1 5579 5751 -561 2432 109 25 0 chr10 34917915 34918281 -110671007 - THE1C LTR MaLR 0 375 1 10278 109 43 8 chr10 34918281 34919808 -110669480 - THE1C-int LTR MaLR 0 1580 1 2351 145 11 3 chr10 34919808 34920180 -110669108 - THE1C LTR MaLR 0 375 1 1806 148 21 33 chr10 34920180 34920343 -110668945 + L1MA9 LINE L1 5748 5911 -401 * 2498 196 53 16 chr10 34920341 34921024 -110668264 - L1M2 LINE L1 -2714 3432 2725 699 148 26 0 chr10 34921029 34921144 -110668144 - Tigger1 DNA MER2_type -1 2417 2300 2785 111 13 29 chr10 34921148 34921600 -110667688 + L1P4 LINE L1 5254 5698 -465 420 200 12 0 chr10 34921600 34921685 -110667603 - L1M4 LINE L1 -6419 1146 1061 4970 12 0 0 chr10 34921695 34922259 -110667029 - L1PA3 LINE L1 -1 6154 5591 4537 16 9 0 chr10 34922259 34922992 -110666296 + L1PA3 LINE L1 4856 5592 -563 * 5895 183 39 5 chr10 34922986 34924011 -110665277 - L1M4 LINE L1 -6487 1078 19 308 263 64 104 chr10 34924967 34925324 -110663964 - L1MC4a LINE L1 -1786 6022 5680 25 31 0 0 chr10 34925346 34925378 -110663910 + AT_rich Low_complexity Low_complexity 1 32 0 4534 221 68 77 chr10 34925772 34927946 -110661342 - L1MA8 LINE L1 -1 6290 4190 13747 40 5 5 chr10 34927946 34930402 -110658886 - L1PA5 LINE L1 0 6154 3699 4534 221 68 77 chr10 34930402 34931374 -110657914 - L1MA8 LINE L1 -2101 4190 3211 2985 9 0 0 chr10 34931964 34932299 -110656989 - L1PA3 LINE L1 -4 6151 5817 541 205 22 89 chr10 34932299 34932523 -110656765 - L1M4 LINE L1 -2935 4232 4024 2900 158 74 2 chr10 34932524 34933075 -110656213 + Tigger3(Golem) DNA MER2_type 2433 3023 -6 828 314 32 16 chr10 34933083 34933675 -110655613 - L1M4 LINE L1 -4945 2153 1534 2388 199 101 27 chr10 34934514 34935217 -110654071 - L1 LINE L1 -1140 5070 4309 345 47 0 0 chr10 34935217 34935260 -110654028 + (TG)n Simple_repeat Simple_repeat 2 44 0 2388 199 101 27 chr10 34935260 34935289 -110653999 - L1 LINE L1 -1901 4309 4284 2761 253 61 59 chr10 34935342 34936351 -110652937 - L1 LINE L1 -2657 3553 2548 248 32 0 0 chr10 34936351 34936382 -110652906 - Alu SINE Alu -15 285 255 2761 253 61 59 chr10 34936382 34937249 -110652039 - L1 LINE L1 -3662 2548 1685 7893 32 6 0 chr10 34937249 34938964 -110650324 + L1PA3 LINE L1 4434 6155 0 2761 253 61 59 chr10 34938964 34940007 -110649281 - L1 LINE L1 -4525 1685 727 787 318 61 26 chr10 34940027 34940568 -110648720 - L1 LINE L1 -5581 560 1 1251 71 82 11 chr10 34942013 34942197 -110647091 - L1PA6 LINE L1 0 6154 5958 239 311 38 9 chr10 34942838 34942944 -110646344 - MER76 LTR ERV -274 414 306 543 312 32 32 chr10 34943057 34943307 -110645981 - MER76 LTR ERV -438 250 1 441 0 0 0 chr10 34943323 34943372 -110645916 + (CA)n Simple_repeat Simple_repeat 2 50 0 201 271 0 0 chr10 34943376 34943424 -110645864 + (CATATA)n Simple_repeat Simple_repeat 1 48 0 244 301 41 16 chr10 34943465 34943588 -110645700 - L1MC4a LINE L1 -1233 6575 6450 5202 125 22 0 chr10 34943605 34945278 -110644010 - L1PA15 LINE L1 -7 6158 4438 278 274 26 103 chr10 34945288 34945522 -110643766 - L1PA12 LINE L1 -5831 1750 1535 1179 281 33 53 chr10 34945695 34946294 -110642994 - L1PA12 LINE L1 -6988 593 7 480 221 88 131 chr10 34946496 34946937 -110642351 - L1MC4a LINE L1 -1595 6213 5800 1587 55 0 15 chr10 34946937 34947136 -110642152 - MER107 DNA MER1_type 0 197 2 480 221 88 131 chr10 34947136 34947259 -110642029 - L1MC4a LINE L1 -2008 5800 5673 265 281 14 0 chr10 34947866 34947977 -110641311 - HERVL LTR ERVL -2374 3390 948 331 260 19 10 chr10 34948533 34948637 -110640651 - HERVL LTR ERVL -3035 2619 2515 516 200 78 106 chr10 34949984 34950344 -110638944 - L1MC4a LINE L1 -1786 6022 5673 2178 123 0 0 chr10 34951327 34951619 -110637669 - AluSx SINE Alu -20 292 1 508 242 20 90 chr10 34954259 34954503 -110634785 - MER76 LTR ERV -54 634 408 234 228 104 133 chr10 34954773 34955184 -110634104 - L1MC4a LINE L1 -1624 6184 5790 4803 149 22 38 chr10 34955184 34956063 -110633225 + MER6 DNA MER2_type 1 865 0 234 228 104 133 chr10 34956063 34956178 -110633110 - L1MC4a LINE L1 -2018 5790 5673 273 313 18 0 chr10 34957285 34957397 -110631891 - HERVL LTR ERVL -3019 2635 2522 1770 114 34 17 chr10 34958495 34958793 -110630495 - MER1A DNA MER1_type 0 529 227 11157 122 11 19 chr10 34958795 34960643 -110628645 + L1PA5 LINE L1 11 1842 -4304 * 39743 56 8 1 chr10 34960638 34966741 -110622547 - L1PA4 LINE L1 -1 6154 5 25929 64 1 0 chr10 34966739 34971064 -110618224 + L1PA5 LINE L1 1825 6152 -2 * 1448 171 4 0 chr10 34971092 34971326 -110617962 - MER1A DNA MER1_type -290 237 3 640 268 24 24 chr10 34972395 34972600 -110616688 - MER76 LTR ERV -33 655 451 306 244 103 0 chr10 34972706 34972784 -110616504 - L1MC4 LINE L1 -1340 6702 6617 368 254 17 8 chr10 34972792 34972910 -110616378 - L1MC4 LINE L1 -2017 5791 5673 12805 138 20 114 chr10 34975689 34978864 -110610424 + L1P LINE L1 9 2887 -3259 38214 68 8 2 chr10 34979298 34985408 -110603880 - L1PA4 LINE L1 -3 6152 1 379 265 161 60 chr10 34985423 34985759 -110603529 - L1MC4 LINE L1 -1388 4758 4389 334 287 127 53 chr10 34986477 34986627 -110602661 + MIR SINE MIR 26 186 -76 21 71 0 0 chr10 34987319 34987361 -110601927 + AT_rich Low_complexity Low_complexity 1 42 0 1829 355 72 27 chr10 34987500 34989038 -110600250 + ERVL LTR ERVL 3725 5379 -385 1155 308 65 22 chr10 34989291 34989784 -110599504 + LTR33 LTR ERVL 8 521 0 21 71 0 0 chr10 34989912 34989954 -110599334 + AT_rich Low_complexity Low_complexity 1 42 0 435 139 0 25 chr10 34989975 34990054 -110599234 - MER116 DNA Mariner 0 80 4 4339 202 48 9 chr10 34990748 34991634 -110597654 + L1MC1 LINE L1 5 925 -5501 232 184 0 0 chr10 34991637 34991675 -110597613 + L1MC1 LINE L1 4566 4603 -1823 5803 102 24 6 chr10 34991685 34992901 -110596387 - L1PA15 LINE L1 -4 6161 4926 549 220 98 71 chr10 34992907 34993162 -110596126 - L1PA13 LINE L1 -5334 1453 1192 * 2881 286 52 19 chr10 34993146 34993995 -110595293 - L1PA13 LINE L1 -5910 877 1 1166 261 37 0 chr10 34994006 34994358 -110594930 + L1MC1 LINE L1 4595 4959 -1467 2071 208 39 2 chr10 34994366 34994775 -110594513 + MSTB1 LTR MaLR 9 432 0 2547 202 22 9 chr10 34994820 34995666 -110593622 + L1MC1 LINE L1 5018 5872 -745 4963 35 2 3 chr10 34995900 34996493 -110592795 - L1PA5 LINE L1 0 6154 5563 2549 46 0 0 chr10 34996493 34996820 -110592468 + L1P LINE L1 4999 5325 -821 1527 168 16 19 chr10 34996817 34997127 -110592161 + L1MC1 LINE L1 5861 6169 -444 * 987 212 151 55 chr10 34997127 34997452 -110591836 + MLT1A1 LTR MaLR 9 364 -1 2292 146 28 21 chr10 34997453 34997885 -110591403 + L1MC1 LINE L1 6179 6613 0 772 270 103 20 chr10 34997891 34998362 -110590926 + L1MEc LINE L1 2200 2700 -3515 1299 178 12 45 chr10 34998400 34998647 -110590641 - MER8 DNA MER2_type 0 239 1 1294 182 12 45 chr10 34999434 34999681 -110589607 + MER8 DNA MER2_type 1 239 0 486 236 31 37 chr10 34999734 34999895 -110589393 + L1MCa LINE L1 455 614 -5812 3582 251 67 50 chr10 34999901 35001280 -110588008 + L1MC/D LINE L1 500 1855 -4709 1732 196 7 0 chr10 35001280 35001576 -110587712 + AluJb SINE Alu 3 300 -12 3582 251 67 50 chr10 35001576 35002864 -110586424 + L1MC/D LINE L1 1855 3232 -3332 * 4611 204 86 44 chr10 35002863 35003607 -110585681 + L1MC/D LINE L1 4065 4776 -1986 1847 31 0 9 chr10 35003607 35003833 -110585455 + L1PA3 LINE L1 5929 6152 -3 4611 204 86 44 chr10 35003833 35005042 -110584246 + L1MC/D LINE L1 4776 6100 -662 283 250 60 12 chr10 35005062 35005146 -110584142 + MER119 DNA MER1_type 455 542 -41 581 305 62 45 chr10 35005188 35005271 -110584017 + L1MCa LINE L1 2577 2657 -3769 2015 123 0 10 chr10 35005271 35005611 -110583677 - AluSx SINE Alu 0 337 1 5270 87 7 17 chr10 35005617 35006368 -110582920 - L1PA14 LINE L1 0 6161 5419 581 305 62 45 chr10 35006368 35006632 -110582656 + L1MCa LINE L1 2661 2939 -3487 248 279 79 38 chr10 35007143 35007408 -110581880 + L1MEc LINE L1 2183 2458 -3938 441 171 94 21 chr10 35007431 35007558 -110581730 + L1MC1 LINE L1 6209 6333 0 339 280 52 10 chr10 35007565 35007758 -110581530 + L1MEc LINE L1 2468 2668 -3547 827 120 16 0 chr10 35008155 35008280 -110581008 - AluSg/x SINE Alu -12 298 172 225 36 0 0 chr10 35008397 35008425 -110580863 + Alu SINE Alu 261 288 -12 2454 95 3 0 chr10 35008436 35008799 -110580489 + L1PA10 LINE L1 5812 6175 0 6955 222 34 31 chr10 35008838 35010479 -110578809 - L1MB4 LINE L1 -1 6677 5030 2182 123 10 0 chr10 35010479 35010788 -110578500 + AluSx SINE Alu 1 312 0 6955 222 34 31 chr10 35010788 35012110 -110577178 - L1MB4 LINE L1 -1648 5030 3713 2118 206 171 18 chr10 35012106 35012758 -110576530 - L1MB4 LINE L1 -3897 2749 1986 * 1919 120 14 3 chr10 35012758 35013049 -110576239 - AluSc SINE Alu -15 294 1 2118 206 171 18 chr10 35013049 35013081 -110576207 - L1MB4 LINE L1 -4660 1986 1960 252 367 0 7 chr10 35013183 35013330 -110575958 - L1MB4 LINE L1 -6383 159 14 4788 140 41 26 chr10 35014084 35015139 -110574149 + L1PA16 LINE L1 4408 5503 -663 2221 96 0 24 chr10 35015139 35015432 -110573856 - AluSx SINE Alu -26 286 1 4788 140 41 26 chr10 35015432 35016107 -110573181 + L1PA16 LINE L1 5503 6166 0 500 339 32 5 chr10 35016302 35016520 -110572768 - MIR SINE MIR -27 235 12 4277 16 0 0 chr10 35016715 35017204 -110572084 - L1PA2 LINE L1 -3 6152 5664 655 317 46 58 chr10 35018301 35018783 -110570505 + L1M3b LINE L1 1 476 -5805 21 36 0 0 chr10 35018951 35018979 -110570309 + AT_rich Low_complexity Low_complexity 1 28 0 1790 245 62 19 chr10 35019185 35020012 -110569276 + L1M3b LINE L1 1094 1943 -4408 3120 290 44 43 chr10 35020012 35021445 -110567843 + L1PBa LINE L1 67 1500 -5363 * 9466 213 43 18 chr10 35021443 35022918 -110566370 + L1PBa LINE L1 2427 3957 -2905 4908 51 2 0 chr10 35022918 35023525 -110565763 + L1PA7 LINE L1 5546 6153 -1 9466 213 43 18 chr10 35023525 35024808 -110564480 + L1PBa LINE L1 3957 5206 -1656 2239 172 59 13 chr10 35024904 35025381 -110563907 - L1M1 LINE L1 -5082 2483 1985 625 152 8 40 chr10 35025376 35025501 -110563787 - L1M1 LINE L1 -7429 136 16 * 916 207 10 35 chr10 35025773 35025976 -110563312 + MSTB LTR MaLR 1 198 -228 928 185 23 12 chr10 35025981 35026154 -110563134 + L1M4 LINE L1 22 196 -7369 13938 204 42 8 chr10 35026154 35028913 -110560375 - ERVL LTR ERVL -2150 3614 763 4551 198 45 25 chr10 35028928 35030615 -110558673 - L1MA7 LINE L1 -25 6852 5134 824 273 92 32 chr10 35030626 35030911 -110558377 - L1MA7 LINE L1 -5254 1399 583 337 304 70 23 chr10 35030958 35031129 -110558159 - L1M3d LINE L1 -5712 179 1 1877 258 20 30 chr10 35031142 35031639 -110557649 - ERVL LTR ERVL -5076 688 197 277 125 0 36 chr10 35032126 35032182 -110557106 + Alu SINE Alu 249 302 0 230 291 163 26 chr10 35032330 35032753 -110556535 + L1M4 LINE L1 2640 3120 -3026 895 160 75 0 chr10 35032930 35033118 -110556170 - L1PA13 LINE L1 -4608 2179 1978 2044 214 77 53 chr10 35033273 35033636 -110555652 + L1M4 LINE L1 1750 2103 -5368 2043 148 7 3 chr10 35033636 35033941 -110555347 + AluSx SINE Alu 1 306 -6 2044 214 77 53 chr10 35033941 35034451 -110554837 + L1M4 LINE L1 2103 2640 -4831 4275 250 47 91 chr10 35034463 35036958 -110552330 + L1M3e LINE L1 1 2377 -4660 959 206 48 31 chr10 35036958 35037186 -110552102 + MSTD LTR MaLR 1 232 -164 2350 265 34 17 chr10 35037186 35037834 -110551454 - MLT-int LTR MaLR -236 1499 841 3816 254 61 20 chr10 35037841 35039881 -110549407 + L1M2a LINE L1 1133 2975 -4192 2139 113 3 0 chr10 35039881 35040163 -110549125 + AluSx SINE Alu 1 283 -29 3816 254 61 20 chr10 35040163 35040432 -110548856 + L1M2a LINE L1 2975 3231 -3936 7012 110 5 7 chr10 35041002 35042042 -110547246 - HERVL-A2 LTR ERVL -4616 1038 1 2033 154 53 33 chr10 35042042 35042556 -110546732 - MLT2A2 LTR ERVL 0 554 17 1957 232 22 49 chr10 35042557 35043334 -110545954 - L1 LINE L1 -3334 2812 2054 262 116 0 0 chr10 35043433 35043476 -110545812 + L1MB8 LINE L1 6105 6147 -31 226 349 0 0 chr10 35044260 35044323 -110544965 + MIR SINE MIR 63 125 -83 198 0 0 0 chr10 35044440 35044462 -110544826 + (CA)n Simple_repeat Simple_repeat 2 23 0 2181 227 12 23 chr10 35045153 35045310 -110543978 + L1M4b LINE L1 1083 1240 -5615 1715 175 156 5 chr10 35045310 35045682 -110543606 - MSTA LTR MaLR 0 428 1 2181 227 12 23 chr10 35045682 35046181 -110543107 + L1M4b LINE L1 1240 1729 -5126 1155 269 74 28 chr10 35046184 35046683 -110542605 + L1M4b LINE L1 1838 2359 -4600 3647 191 132 173 chr10 35046918 35047321 -110541967 + L1M2 LINE L1 1 419 -6430 1000 132 0 0 chr10 35047321 35047457 -110541831 - AluSp SINE Alu -94 219 84 3647 191 132 173 chr10 35047457 35048408 -110540880 + L1M2 LINE L1 419 1514 -5335 549 213 8 25 chr10 35048408 35048530 -110540758 + FLAM_C SINE Alu 6 125 -18 3647 191 132 173 chr10 35048530 35048958 -110540330 + L1M2 LINE L1 1514 1958 -4891 4272 48 0 0 chr10 35048960 35049544 -110539744 + L1P2 LINE L1 5215 5798 -356 4264 198 48 9 chr10 35049549 35050859 -110538429 + L1M2 LINE L1 2680 4042 -2806 1233 247 28 8 chr10 35051125 35051514 -110537774 - L1 LINE L1 -3151 3177 2781 * 4141 143 82 20 chr10 35051510 35052397 -110536891 - L1PA16 LINE L1 0 6166 5234 370 296 0 10 chr10 35052486 35052584 -110536704 - L1PA13 LINE L1 -6564 223 127 3762 168 62 62 chr10 35052612 35053705 -110535583 - L1 LINE L1 -4065 1263 339 874 188 6 11 chr10 35053706 35053882 -110535406 - L1 LINE L1 -5149 179 5 260 340 90 19 chr10 35053962 35054118 -110535170 - MLT2E LTR ERVL -425 203 37 22 0 0 0 chr10 35054456 35054478 -110534810 + AT_rich Low_complexity Low_complexity 1 22 0 831 78 39 8 chr10 35054590 35054718 -110534570 + L1PB1 LINE L1 5659 5790 -361 274 103 0 35 chr10 35054738 35054796 -110534492 - L1MC4 LINE L1 -1339 6703 6648 189 147 0 0 chr10 35054828 35054862 -110534426 + (TA)n Simple_repeat Simple_repeat 1 34 0 2351 114 17 3 chr10 35054862 35055222 -110534066 + L1PB1 LINE L1 5785 6149 -2 23 0 0 0 chr10 35055227 35055250 -110534038 + AT_rich Low_complexity Low_complexity 1 23 0 27029 82 3 6 chr10 35055250 35058960 -110530328 - HERVL LTR ERVL -828 4826 1127 1022 104 0 0 chr10 35059061 35059196 -110530092 - AluY SINE Alu -176 135 1 382 291 22 66 chr10 35059459 35059686 -110529602 + L1MDa LINE L1 2430 2646 -3894 495 266 81 16 chr10 35059688 35059996 -110529292 + L1MDa LINE L1 2694 3021 -3519 36 40 0 0 chr10 35060059 35060109 -110529179 + AT_rich Low_complexity Low_complexity 1 50 0 30 103 0 0 chr10 35060383 35060490 -110528798 + AT_rich Low_complexity Low_complexity 1 107 0 496 290 44 61 chr10 35060590 35060713 -110528575 + L1MEc LINE L1 2192 2316 -4080 1649 138 15 0 chr10 35060713 35060974 -110528314 + L1PA11 LINE L1 5899 6163 -11 496 290 44 61 chr10 35060974 35061147 -110528141 + L1MEc LINE L1 2316 2483 -3913 391 273 77 7 chr10 35061242 35061385 -110527903 + L1MEc LINE L1 2517 2669 -3546 25 51 0 0 chr10 35061466 35061505 -110527783 + AT_rich Low_complexity Low_complexity 1 39 0 24196 61 11 1 chr10 35062528 35065780 -110523508 - L1P LINE L1 -2857 3289 4 631 258 45 42 chr10 35065782 35066115 -110523173 - L1M4c LINE L1 -4788 2171 1838 1709 213 32 74 chr10 35066120 35066794 -110522494 - L1M4c LINE L1 -5128 1727 1083 2362 100 0 6 chr10 35067386 35067697 -110521591 + AluSc SINE Alu 1 309 0 267 31 0 0 chr10 35068522 35068554 -110520734 + (TTG)n Simple_repeat Simple_repeat 2 33 0 21 36 0 0 chr10 35069247 35069275 -110520013 + AT_rich Low_complexity Low_complexity 1 28 0 588 160 28 35 chr10 35069402 35069546 -110519742 - L1MA4A LINE L1 0 6303 6161 2060 201 35 2 chr10 35069546 35070034 -110519254 - L1 LINE L1 -2122 4024 3521 694 170 7 20 chr10 35070031 35070184 -110519104 - L1MA4A LINE L1 -134 6169 6019 * 229 243 27 0 chr10 35070174 35070248 -110519040 - L1 LINE L1 -2690 3456 3381 * 22 0 0 0 chr10 35071110 35071132 -110518156 + AT_rich Low_complexity Low_complexity 1 22 0 306 295 38 9 chr10 35071574 35071679 -110517609 + L1MC4a LINE L1 5682 5789 -2019 453 290 54 49 chr10 35071739 35072073 -110517215 + L1MC4a LINE L1 5816 6154 -1654 2192 170 70 2 chr10 35072073 35072472 -110516816 + MSTB LTR MaLR 1 426 0 453 290 54 49 chr10 35072472 35072506 -110516782 + L1MC4a LINE L1 6154 6186 -1622 513 351 53 17 chr10 35072556 35072967 -110516321 + L1MC4 LINE L1 6276 6617 -1191 1528 283 62 28 chr10 35072977 35073620 -110515668 + MER76 LTR ERV 1 665 -23 2014 166 91 2 chr10 35075195 35075611 -110513677 + MLT1C LTR MaLR 2 454 -13 201 155 28 84 chr10 35125789 35125860 -110463428 - L2 LINE L2 -759 2555 2489 649 207 69 57 chr10 35126044 35126290 -110462998 + MER112 DNA MER1_type 6 254 -6 6022 226 94 16 chr10 35126582 35128732 -110460556 - L1M4c LINE L1 -4377 2448 2 3243 159 43 19 chr10 35129761 35130446 -110458842 - Tigger7 DNA MER2_type 0 2487 1 333 150 14 186 chr10 35130935 35131075 -110458213 + MIR SINE MIR 123 238 -24 332 103 0 29 chr10 35131260 35131328 -110457960 + (TCTCTG)n Simple_repeat Simple_repeat 2 67 0 339 85 0 0 chr10 35133778 35133825 -110455463 + (TG)n Simple_repeat Simple_repeat 2 48 0 262 340 64 0 chr10 35134214 35134308 -110454980 - L2 LINE L2 -9 3263 3164 224 361 76 8 chr10 35134368 35134487 -110454801 - L2 LINE L2 0 3272 3146 1275 257 29 11 chr10 35134646 35135074 -110454214 + MLT1H1 LTR MaLR 1 481 -61 295 214 69 92 chr10 35135387 35135518 -110453770 - MIR SINE MIR -9 253 126 1576 171 68 54 chr10 35135924 35136293 -110452995 + MLT1A2 LTR MaLR 1 374 0 204 238 0 0 chr10 35136416 35136458 -110452830 - MIR SINE MIR -113 149 108 464 281 87 46 chr10 35138096 35138662 -110450626 - L1ME LINE L1 -4914 1156 560 1848 169 3 10 chr10 35138829 35139130 -110450158 - AluJb SINE Alu -13 299 1 2277 180 35 64 chr10 35139218 35139719 -110449569 + MLT2B1 LTR ERVL 1 389 -25 2940 96 73 0 chr10 35139938 35140335 -110448953 - MSTA LTR MaLR -2 426 1 306 0 0 0 chr10 35140380 35140414 -110448874 + (TG)n Simple_repeat Simple_repeat 2 35 0 1200 186 5 0 chr10 35140449 35140642 -110448646 + MSTA LTR MaLR 1 194 -234 222 214 11 34 chr10 35140684 35140773 -110448515 + (TA)n Simple_repeat Simple_repeat 2 88 0 817 265 119 107 chr10 35140846 35141258 -110448030 + LTR16A LTR ERVL 1 417 -33 420 282 24 0 chr10 35141398 35141522 -110447766 - L1ME LINE L1 -5937 133 7 431 292 100 89 chr10 35141948 35142308 -110446980 + L3 LINE CR1 700 1063 -514 1083 199 41 8 chr10 35142320 35142628 -110446660 + MLT1A1 LTR MaLR 8 365 0 482 304 158 21 chr10 35142638 35142973 -110446315 + L3 LINE CR1 1091 1471 -106 500 249 59 102 chr10 35143018 35143052 -110446236 + MER102a DNA MER1_type 37 71 -1346 2186 141 0 0 chr10 35143052 35143364 -110445924 + AluSx SINE Alu 1 312 0 500 249 59 102 chr10 35143364 35143500 -110445788 + MER102a DNA MER1_type 71 191 -1226 2432 161 41 5 chr10 35143500 35143917 -110445371 - MSTB1 LTR MaLR 0 432 1 500 249 59 102 chr10 35143917 35144050 -110445238 + MER102a DNA MER1_type 191 328 -2 206 179 26 0 chr10 35144668 35144707 -110444581 + L3 LINE CR1 1536 1575 -2 644 103 21 10 chr10 35144745 35144842 -110444446 + MER4A LTR ERV1 1 98 -566 1994 128 3 19 chr10 35144842 35145193 -110444095 + MER4A LTR ERV1 261 664 0 676 231 68 68 chr10 35146344 35146396 -110442892 - L1ME1 LINE L1 -25 6141 6090 2103 107 48 0 chr10 35146396 35146685 -110442603 - AluSx SINE Alu -7 305 3 676 231 68 68 chr10 35146685 35146883 -110442405 - L1ME1 LINE L1 -75 6091 5891 270 0 0 0 chr10 35148151 35148181 -110441107 + (TG)n Simple_repeat Simple_repeat 2 31 0 502 243 88 33 chr10 35148377 35148558 -110440730 + MIR SINE MIR 18 208 -54 1724 134 0 4 chr10 35148671 35148925 -110440363 + AluSg SINE Alu 51 303 -7 2204 97 20 10 chr10 35149469 35149792 -110439496 + AluSx SINE Alu 1 312 0 362 200 14 136 chr10 35149802 35149942 -110439346 - L1ME4a LINE L1 -64 6057 5935 1241 311 171 26 chr10 35151604 35152895 -110436393 + L2 LINE L2 1836 3313 0 1628 277 114 59 chr10 35153361 35154713 -110434575 + L1ME2 LINE L1 88 1401 -4816 1588 245 147 11 chr10 35154895 35155459 -110433829 - L1MEc LINE L1 -1524 4691 4051 * 3918 249 61 30 chr10 35155455 35155851 -110433437 - L1MEc LINE L1 -2553 3662 3280 2461 83 0 0 chr10 35155851 35156152 -110433136 - AluSg SINE Alu -9 301 1 3918 249 61 30 chr10 35156152 35157724 -110431564 - L1MEc LINE L1 -2935 3280 1658 301 294 46 61 chr10 35157726 35157923 -110431365 + L1ME2 LINE L1 2197 2390 -4006 265 300 33 7 chr10 35157946 35158096 -110431192 + L1ME2 LINE L1 2401 2554 -3661 1085 306 100 27 chr10 35158114 35159498 -110429790 + L1ME2 LINE L1 4212 5702 -537 594 67 0 0 chr10 35159528 35159603 -110429685 - MADE1 DNA Mariner -5 75 1 241 212 113 13 chr10 35159962 35160055 -110429233 + L1ME2 LINE L1 5910 6009 -222 2181 118 0 3 chr10 35161078 35161383 -110427905 - AluSx SINE Alu -8 304 1 2227 109 3 0 chr10 35163455 35163749 -110425539 - AluSp SINE Alu -18 295 1 371 277 43 21 chr10 35163791 35163932 -110425356 - MARNA DNA Mariner -16 570 427 202 50 50 50 chr10 35164054 35164094 -110425194 + (TAAAAA)n Simple_repeat Simple_repeat 2 41 0 2038 172 20 20 chr10 35164108 35164498 -110424790 + MLT1B LTR MaLR 1 390 0 422 250 10 0 chr10 35166001 35166097 -110423191 - MIR SINE MIR -111 151 55 407 214 42 10 chr10 35166766 35166871 -110422417 - L1MC/D LINE L1 -430 5736 5641 2688 173 20 9 chr10 35166873 35167331 -110421957 + Tigger1 DNA MER2_type 2 464 -1954 2130 166 119 8 chr10 35167331 35167716 -110421572 - MSTA LTR MaLR 0 428 1 2615 100 23 18 chr10 35167716 35168107 -110421181 - MSTA-int LTR MaLR 0 1580 1188 11227 116 19 15 chr10 35168107 35168618 -110420670 + Tigger1 DNA MER2_type 456 964 -1454 2365 92 0 0 chr10 35168618 35168913 -110420375 - AluY SINE Alu -16 295 1 1772 192 7 0 chr10 35168916 35169218 -110420070 - AluSx SINE Alu -8 304 1 11227 116 19 15 chr10 35169218 35170412 -110418876 + Tigger1 DNA MER2_type 965 2171 -247 1868 192 35 15 chr10 35170415 35170811 -110418477 - L1MDa LINE L1 -4658 1882 1479 667 223 144 54 chr10 35170934 35171288 -110418000 + L1MC5 LINE L1 7121 7506 -455 2740 183 90 16 chr10 35171326 35171950 -110417338 - MER63C DNA MER1_type -136 794 125 250 61 0 0 chr10 35171992 35172025 -110417263 - MER63C DNA MER1_type -897 33 1 233 233 100 0 chr10 35172994 35173054 -110416234 - MER2 DNA MER2_type 0 345 280 534 117 45 63 chr10 35173100 35173211 -110416077 - MER2 DNA MER2_type -136 209 101 22 35 0 0 chr10 35174402 35174431 -110414857 + AT_rich Low_complexity Low_complexity 1 29 0 260 317 0 12 chr10 35174540 35174622 -110414666 + MER3 DNA MER1_type 49 129 -80 2028 61 0 27 chr10 35174622 35174883 -110414405 - AluY SINE Alu -21 290 37 2261 155 77 34 chr10 35174922 35175523 -110413765 - L1MB3 LINE L1 -519 5664 5057 * 2410 141 107 19 chr10 35175480 35175964 -110413324 + L1MB3 LINE L1 5646 6172 -11 264 137 59 20 chr10 35175964 35176015 -110413273 + MER3 DNA MER1_type 155 207 -2 * 271 176 0 20 chr10 35175977 35176028 -110413260 - MER3 DNA MER1_type -123 86 37 364 229 110 28 chr10 35176429 35176538 -110412750 + MIR3 SINE MIR 68 185 -23 1838 164 67 12 chr10 35176596 35176926 -110412362 + MER7A DNA MER2_type 1 346 0 23 0 0 0 chr10 35177394 35177417 -110411871 + GC_rich Low_complexity Low_complexity 1 23 0 2246 88 14 7 chr10 35178277 35178574 -110410714 - AluSq SINE Alu -14 299 1 217 310 34 96 chr10 35179289 35179355 -110409933 - L3 LINE CR1 -418 1159 1090 2238 89 38 0 chr10 35179355 35179647 -110409641 + AluSp SINE Alu 1 303 -10 217 310 34 96 chr10 35179647 35179903 -110409385 - L3 LINE CR1 -487 1090 857 896 265 17 21 chr10 35179936 35180227 -110409061 - L1ME3A LINE L1 -5 6165 5876 342 0 0 0 chr10 35180498 35180536 -110408752 + (TG)n Simple_repeat Simple_repeat 2 39 0 226 161 71 0 chr10 35180872 35180984 -110408304 + (TA)n Simple_repeat Simple_repeat 1 120 0 1933 148 0 7 chr10 35182061 35182352 -110406936 - AluJo SINE Alu -23 289 1 635 275 137 28 chr10 35182353 35182637 -110406651 - LTR33 LTR ERVL -55 466 152 24 0 0 0 chr10 35183398 35183422 -110405866 + AT_rich Low_complexity Low_complexity 1 24 0 821 165 8 0 chr10 35183422 35183549 -110405739 - FLAM_A SINE Alu -4 129 2 1112 65 7 0 chr10 35183846 35183984 -110405304 - L1MA3 LINE L1 -3 6302 6164 526 250 79 18 chr10 35185344 35185547 -110403741 - MIR SINE MIR -48 214 1 660 310 112 39 chr10 35186030 35186197 -110403091 + L2 LINE L2 2815 2968 -345 578 141 11 0 chr10 35186197 35186289 -110402999 + HY4 scRNA scRNA 1 93 0 660 310 112 39 chr10 35186289 35186586 -110402702 + L2 LINE L2 2968 3313 0 231 268 209 26 chr10 35187257 35187410 -110401878 + MIR SINE MIR 28 208 -54 393 301 65 48 chr10 35187506 35187692 -110401596 + MIR3 SINE MIR 20 208 0 1795 97 0 0 chr10 35187763 35187989 -110401299 + AluSg/x SINE Alu 80 305 -5 250 253 50 86 chr10 35188112 35188227 -110401061 + MER5A DNA MER1_type 1 124 -65 1620 179 17 10 chr10 35188227 35188524 -110400764 - AluJo SINE Alu -13 299 1 250 253 50 86 chr10 35188524 35188558 -110400730 + MER5A DNA MER1_type 124 158 -31 1881 168 18 0 chr10 35188868 35189195 -110400093 - MLT1B LTR MaLR -57 333 1 303 28 0 0 chr10 35190258 35190294 -110398994 + (TG)n Simple_repeat Simple_repeat 1 36 0 1577 157 9 63 chr10 35191126 35191445 -110397843 - AluJo SINE Alu -7 305 4 1423 224 69 58 chr10 35193370 35193392 -110395896 - L1MC5 LINE L1 -815 7146 7126 2279 89 0 3 chr10 35193392 35193694 -110395594 - AluSq SINE Alu -12 301 1 1423 224 69 58 chr10 35193694 35194297 -110394991 - L1MC5 LINE L1 -835 7126 6518 465 268 38 65 chr10 35194956 35195217 -110394071 + L1ME4a LINE L1 5509 5762 -359 816 243 201 25 chr10 35195248 35195815 -110393473 - Charlie7 DNA MER1_type -23 2589 1923 2550 88 0 0 chr10 35195840 35196171 -110393117 - L1PA13 LINE L1 -8 6155 5825 283 0 23 45 chr10 35196173 35196217 -110393071 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 1927 117 7 3 chr10 35196217 35196499 -110392789 - AluSx SINE Alu -29 283 1 403 263 59 7 chr10 35196502 35196654 -110392634 + Charlie7 DNA MER1_type 1396 1555 -1057 1321 122 0 0 chr10 35196675 35196883 -110392405 + AluSq SINE Alu 95 302 0 1157 254 16 0 chr10 35196931 35197187 -110392101 - MIR SINE MIR -2 260 1 2409 226 187 51 chr10 35197213 35197528 -110391760 - Charlie7 DNA MER1_type -1296 1316 1045 2136 100 0 16 chr10 35197528 35197837 -110391451 - AluSq SINE Alu -7 306 3 1813 154 3 0 chr10 35197847 35198133 -110391155 - AluJb SINE Alu -25 287 1 2409 226 187 51 chr10 35198133 35198617 -110390671 - Charlie7 DNA MER1_type -1574 1038 621 1036 127 0 58 chr10 35198617 35198655 -110390633 - L1PB4 LINE L1 -1 6155 6116 1774 136 4 0 chr10 35198655 35198920 -110390368 - AluSx SINE Alu -12 300 35 1036 127 0 58 chr10 35198920 35199070 -110390218 - L1PB4 LINE L1 -40 6116 5978 2409 226 187 51 chr10 35199070 35199382 -110389906 - Charlie7 DNA MER1_type -1991 621 40 274 278 43 9 chr10 35199401 35199516 -110389772 + L1ME4a LINE L1 5791 5909 -212 1683 172 111 18 chr10 35199684 35200079 -110389209 + MSTB1 LTR MaLR 1 432 0 1046 97 0 7 chr10 35200512 35200657 -110388631 + FRAM SINE Alu 1 140 -36 2032 135 0 0 chr10 35201105 35201409 -110387879 - AluSx SINE Alu 0 312 9 979 115 0 0 chr10 35201411 35201550 -110387738 - AluSq/x SINE Alu -174 139 1 1419 180 20 39 chr10 35201615 35201920 -110387368 + AluJo SINE Alu 1 299 -13 625 252 19 48 chr10 35201995 35202205 -110387083 - MIR SINE MIR -57 205 2 228 296 0 0 chr10 35202649 35202774 -110386514 + (TG)n Simple_repeat Simple_repeat 2 126 0 188 333 146 10 chr10 35203826 35203922 -110385366 - MIR SINE MIR -76 132 24 449 125 102 0 chr10 35204495 35204583 -110384705 + L1MB3 LINE L1 6080 6176 -7 1586 197 0 16 chr10 35204586 35204901 -110384387 - AluJo SINE Alu 0 312 3 2101 105 87 19 chr10 35204901 35205224 -110384064 + THE1B LTR MaLR 1 345 -19 1578 83 5 14 chr10 35205626 35205842 -110383446 + AluSq SINE Alu 1 214 -99 1383 163 4 0 chr10 35205849 35206076 -110383212 - AluJb SINE Alu -82 230 3 721 138 50 50 chr10 35206078 35206237 -110383051 + L1MB4 LINE L1 6020 6178 -2 207 88 0 0 chr10 35206366 35206400 -110382888 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 207 0 0 0 chr10 35206399 35206422 -110382866 + (TC)n Simple_repeat Simple_repeat 2 24 0 741 130 16 32 chr10 35206422 35206545 -110382743 - AluSx SINE Alu -10 299 179 291 44 267 0 chr10 35206546 35206591 -110382697 + AluSg/x SINE Alu 138 194 -106 1264 106 0 32 chr10 35206592 35206780 -110382508 - AluSx SINE Alu -130 182 1 302 300 107 104 chr10 35207382 35207832 -110381456 + L2 LINE L2 2822 3272 0 279 280 121 51 chr10 35207833 35207990 -110381298 + MIR SINE MIR 24 191 -71 1901 139 7 10 chr10 35207995 35208290 -110380998 + AluSx SINE Alu 1 294 -18 544 278 31 19 chr10 35208365 35208527 -110380761 - MIR SINE MIR -4 258 95 1827 162 0 7 chr10 35208551 35208859 -110380429 + AluJo SINE Alu 1 306 -6 797 157 0 0 chr10 35208880 35208995 -110380293 + FLAM_C SINE Alu 4 118 -15 1404 174 89 0 chr10 35210497 35210779 -110378509 - AluJo SINE Alu -3 309 3 1022 135 22 17 chr10 35211267 35211445 -110377843 + L1PA16 LINE L1 5979 6157 -9 349 322 114 42 chr10 35211766 35212055 -110377233 + L1M4 LINE L1 4623 4932 -1214 21 82 0 0 chr10 35212179 35212228 -110377060 + AT_rich Low_complexity Low_complexity 1 49 0 4127 193 120 35 chr10 35212303 35213262 -110376026 - Charlie1 DNA MER1_type 0 2761 1885 1901 144 0 0 chr10 35213262 35213553 -110375735 + AluJb SINE Alu 1 291 -21 4127 193 120 35 chr10 35213553 35213601 -110375687 - Charlie1 DNA MER1_type -876 1885 1842 2232 108 0 13 chr10 35213601 35213915 -110375373 + AluSg SINE Alu 1 310 0 4127 193 120 35 chr10 35213915 35214083 -110375205 - Charlie1 DNA MER1_type -919 1842 1485 1137 200 225 48 chr10 35214083 35214662 -110374626 + L1MC4 LINE L1 7373 7785 0 238 182 68 68 chr10 35214738 35214826 -110374462 + L1MC4a LINE L1 6052 6139 -1669 1224 187 128 22 chr10 35214841 35215114 -110374174 - AluJo SINE Alu 0 302 1 1783 139 0 4 chr10 35215145 35215425 -110373863 - AluJo SINE Alu -23 289 11 710 290 119 43 chr10 35215711 35216007 -110373281 - L1M4 LINE L1 -2916 3230 2958 1801 163 3 6 chr10 35216007 35216320 -110372968 - AluJo SINE Alu 0 312 1 710 290 119 43 chr10 35216320 35216534 -110372754 - L1M4 LINE L1 -3188 2958 2681 802 107 0 8 chr10 35216753 35216874 -110372414 - AluSg/x SINE Alu -17 293 174 272 244 65 24 chr10 35216884 35217007 -110372281 - HAL1b LINE L1 -539 809 682 321 244 156 19 chr10 35217059 35217219 -110372069 - L1ME3A LINE L1 -182 6268 6087 4941 259 115 28 chr10 35217249 35217339 -110371949 - L1MEc LINE L1 -1303 5123 5042 1471 110 13 31 chr10 35217339 35217567 -110371721 + MER30 DNA MER1_type 4 227 -3 4941 259 115 28 chr10 35217567 35217724 -110371564 - L1MEc LINE L1 -1384 5042 4900 2336 66 10 0 chr10 35217724 35218029 -110371259 - AluY SINE Alu -3 308 1 4941 259 115 28 chr10 35218029 35220109 -110369179 - L1MEc LINE L1 -1526 4900 2588 1948 125 4 0 chr10 35220109 35220421 -110368867 + AluSx SINE Alu 1 313 0 4941 259 115 28 chr10 35220421 35220628 -110368660 - L1MEc LINE L1 -3838 2588 2400 2850 87 24 7 chr10 35220792 35221206 -110368082 - L1PA13 LINE L1 -1 6162 5742 225 0 0 0 chr10 35221319 35221344 -110367944 + (CA)n Simple_repeat Simple_repeat 2 26 0 464 281 127 26 chr10 35221500 35221904 -110367384 - L1MEc LINE L1 -4700 1733 1371 180 0 0 0 chr10 35221904 35221924 -110367364 + (TTA)n Simple_repeat Simple_repeat 2 21 0 464 281 127 26 chr10 35221924 35222332 -110366956 - L1MEc LINE L1 -5062 1371 996 439 197 103 17 chr10 35222403 35222520 -110366768 - L1ME2 LINE L1 -2 6162 6036 477 237 53 0 chr10 35222555 35222707 -110366581 + L1ME1 LINE L1 5733 5892 -274 1866 108 22 4 chr10 35222719 35223035 -110366253 + AluSx SINE Alu 1 321 0 474 324 149 18 chr10 35223108 35223444 -110365844 - L3 LINE CR1 -805 772 393 1896 130 0 0 chr10 35223698 35224024 -110365264 + AluSx SINE Alu 1 326 0 660 185 116 41 chr10 35224300 35224446 -110364842 + MER2 DNA MER2_type 1 157 -188 218 339 189 0 chr10 35225143 35225270 -110364018 + MIR3 SINE MIR 47 197 -11 394 262 99 0 chr10 35225514 35225655 -110363633 - MIR3 SINE MIR -5 203 49 1600 177 0 3 chr10 35226088 35226370 -110362918 + AluJo SINE Alu 1 281 -31 566 82 12 0 chr10 35226373 35226458 -110362830 + (GGAA)n Simple_repeat Simple_repeat 4 89 0 271 70 0 70 chr10 35226921 35226964 -110362324 + AluJ/FLAM SINE Alu 21 60 -242 427 215 11 11 chr10 35226964 35227057 -110362231 - AluJo SINE Alu -133 179 87 2577 80 0 43 chr10 35227245 35227618 -110361670 - MER4A LTR ERV1 -307 357 1 1976 149 0 7 chr10 35227800 35228101 -110361187 + AluSx SINE Alu 1 299 -13 183 42 0 0 chr10 35228105 35228129 -110361159 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 245 341 0 0 chr10 35228313 35228401 -110360887 + (TGAA)n Simple_repeat Simple_repeat 1 88 0 2347 181 12 5 chr10 35228418 35228605 -110360683 + MSTB LTR MaLR 14 198 -228 5224 46 16 0 chr10 35228605 35229232 -110360056 + L1PA8 LINE L1 5532 6168 -4 2347 181 12 5 chr10 35229232 35229454 -110359834 + MSTB LTR MaLR 198 426 0 2099 116 7 3 chr10 35230705 35231015 -110358273 - AluSq SINE Alu -2 311 1 427 305 118 35 chr10 35231052 35231255 -110358033 - MIR SINE MIR -42 220 1 2119 109 6 3 chr10 35231484 35231795 -110357493 + AluSx SINE Alu 1 312 0 243 319 26 9 chr10 35231798 35231905 -110357383 + L1ME4a LINE L1 5815 5924 -192 216 0 0 0 chr10 35231905 35231929 -110357359 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 321 219 0 117 chr10 35231952 35232080 -110357208 + L1ME4a LINE L1 6009 6121 0 201 245 20 0 chr10 35232909 35232958 -110356330 - MIR3 SINE MIR -8 200 151 248 292 97 18 chr10 35233137 35233250 -110356038 - MIR SINE MIR -67 141 20 247 257 138 18 chr10 35234077 35234186 -110355102 - L2 LINE L2 -227 3045 2924 880 200 43 0 chr10 35236788 35236978 -110352310 + MSTB-int LTR MaLR 32 229 -1477 1721 152 156 9 chr10 35236978 35237293 -110351995 + MSTA LTR MaLR 68 428 0 9816 129 7 54 chr10 35237295 35238950 -110350338 + MSTA-int LTR MaLR 3 1579 -1 743 158 211 7 chr10 35238951 35239103 -110350185 + MSTA LTR MaLR 1 183 -245 1538 109 101 16 chr10 35239337 35239584 -110349704 + MSTA LTR MaLR 161 428 0 1084 233 24 12 chr10 35239584 35239837 -110349451 + MLT-int LTR MaLR 387 642 -1093 368 270 36 36 chr10 35240094 35240205 -110349083 - L2 LINE L2 0 3313 3203 282 160 0 0 chr10 35241460 35241510 -110347778 + (CA)n Simple_repeat Simple_repeat 2 51 0 269 277 31 39 chr10 35241632 35241762 -110347526 + L2 LINE L2 2925 3053 -219 770 187 0 0 chr10 35244060 35244194 -110345094 + MER94 DNA DNA 1 134 0 2009 130 7 21 chr10 35245535 35245820 -110343468 + AluSx SINE Alu 1 281 -31 207 69 0 0 chr10 35245823 35245852 -110343436 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 541 297 54 58 chr10 35246336 35246763 -110342525 + L1MCc LINE L1 14 438 -5985 963 263 103 41 chr10 35247269 35247961 -110341327 + L1MCc LINE L1 1262 2003 -4893 1838 168 0 0 chr10 35247961 35248247 -110341041 + AluJb SINE Alu 20 305 -7 1696 82 24 4 chr10 35248324 35248579 -110340709 - L1MA2 LINE L1 0 6304 6045 43112 56 5 1 chr10 35248579 35254689 -110334599 - L1PA5 LINE L1 -9 6145 11 542 213 49 129 chr10 35254688 35255007 -110334281 + L1M2 LINE L1 1564 1924 -4292 * 240 111 0 0 chr10 35255007 35255052 -110334236 + (TG)n Simple_repeat Simple_repeat 2 46 0 542 213 49 129 chr10 35255052 35255096 -110334192 + L1M2 LINE L1 1924 1970 -4246 2086 135 3 0 chr10 35255111 35255400 -110333888 + AluSx SINE Alu 9 298 -14 253 271 140 0 chr10 35255418 35255525 -110333763 + L1MCc LINE L1 2570 2691 -4431 552 279 35 35 chr10 35255535 35255707 -110333581 + MLT1J LTR MaLR 184 355 -156 1984 151 6 22 chr10 35256919 35257266 -110332022 + AluSx SINE Alu 1 342 0 434 282 151 62 chr10 35257559 35257871 -110331417 + MLT1L LTR MaLR 3 286 -329 1661 160 43 43 chr10 35257871 35258171 -110331117 + AluJo SINE Alu 1 300 -12 434 282 151 62 chr10 35258171 35258421 -110330867 + MLT1L LTR MaLR 286 615 0 399 287 44 7 chr10 35259426 35259562 -110329726 + MIR SINE MIR 47 187 -75 2396 82 7 0 chr10 35259790 35260093 -110329195 + AluSp SINE Alu 1 305 -8 216 274 0 16 chr10 35260739 35260801 -110328487 + GA-rich Low_complexity Low_complexity 5 65 0 21 36 0 0 chr10 35260968 35260996 -110328292 + AT_rich Low_complexity Low_complexity 1 28 0 1502 191 70 0 chr10 35260996 35261269 -110328019 + AluJo SINE Alu 1 292 -20 658 205 38 102 chr10 35261344 35261637 -110327651 + L1ME4a LINE L1 5672 5945 -176 1819 155 50 83 chr10 35262290 35262454 -110326834 + MLT1D LTR MaLR 1 169 -336 2132 142 0 0 chr10 35262454 35262749 -110326539 - AluSx SINE Alu -17 295 1 1819 155 50 83 chr10 35262749 35262784 -110326504 + MLT1D LTR MaLR 169 204 -301 2109 187 72 119 chr10 35262784 35263547 -110325741 + LTR8A LTR ERV1 1 727 0 1819 155 50 83 chr10 35263547 35263745 -110325543 + MLT1D LTR MaLR 204 386 -119 * 3738 125 36 0 chr10 35263727 35264312 -110324976 + LTR24C LTR ERV1 30 635 0 255 132 0 0 chr10 35264312 35264350 -110324938 + MLT1D LTR MaLR 468 505 0 181 274 48 0 chr10 35264369 35264431 -110324857 + MIR SINE MIR 124 188 -74 1134 150 0 99 chr10 35264612 35264845 -110324443 + AluJo SINE Alu 90 299 -13 283 211 0 0 chr10 35264904 35264982 -110324306 - MIR SINE MIR -64 144 66 295 346 13 26 chr10 35265045 35265198 -110324090 - MER5A DNA MER1_type -32 157 7 331 246 132 54 chr10 35265299 35265632 -110323656 - L1MC4 LINE L1 -2 8040 7682 196 254 0 60 chr10 35265997 35266064 -110323224 + L2 LINE L2 2427 2489 -825 206 287 30 20 chr10 35266255 35266356 -110322932 + L2 LINE L2 2719 2820 -494 757 333 47 43 chr10 35266865 35267062 -110322226 + L2 LINE L2 2188 2383 -931 2608 139 25 28 chr10 35267062 35267307 -110321981 - MSTB1 LTR MaLR 0 432 187 225 0 0 0 chr10 35267307 35267332 -110321956 + (TG)n Simple_repeat Simple_repeat 2 26 0 2608 139 25 28 chr10 35267332 35267518 -110321770 - MSTB1 LTR MaLR -245 187 2 757 333 47 43 chr10 35267518 35267854 -110321434 + L2 LINE L2 2383 2723 -591 4226 89 11 101 chr10 35268511 35269241 -110320047 + MER4A LTR ERV1 1 664 0 2304 116 73 14 chr10 35270309 35270653 -110318635 - THE1B LTR MaLR 0 364 1 11784 84 5 0 chr10 35270653 35272143 -110317145 - THE1B-int LTR MaLR 0 1580 84 2081 147 75 15 chr10 35272147 35272480 -110316808 - THE1B LTR MaLR -11 353 1 1108 284 108 33 chr10 35272732 35273215 -110316073 + LTR33 LTR ERVL 1 519 -2 1994 122 3 52 chr10 35273694 35274023 -110315265 - MER4E LTR ERV1 -1 778 466 1298 131 10 10 chr10 35274070 35274269 -110315019 - MER4B LTR ERV1 -411 199 1 1050 344 99 29 chr10 35274330 35275340 -110313948 + ERVL LTR ERVL 861 1941 -3823 * 1795 296 57 37 chr10 35275338 35276279 -110313009 + ERVL LTR ERVL 1906 2935 -2111 419 322 64 40 chr10 35276401 35276525 -110312763 + ERVL LTR ERVL 3049 3169 -2532 2022 150 127 18 chr10 35276525 35276911 -110312377 + MSTA LTR MaLR 1 428 0 419 322 64 40 chr10 35276911 35277137 -110312151 + ERVL LTR ERVL 3169 3457 -2244 1721 204 48 25 chr10 35277161 35277554 -110311734 + MLT2D LTR ERVL 1 402 -12 941 269 18 4 chr10 35277751 35278026 -110311262 + ERVL LTR ERVL 3767 4045 -1719 597 284 77 42 chr10 35278118 35278160 -110311128 + ERVL LTR ERVL 4264 4303 -1461 2442 169 20 2 chr10 35278160 35278568 -110310720 - MER47B DNA MER2_type -3 415 1 597 284 77 42 chr10 35278568 35278810 -110310478 + ERVL LTR ERVL 4303 4558 -1206 1882 151 0 35 chr10 35278815 35279126 -110310162 - AluJb SINE Alu -7 305 6 507 276 26 13 chr10 35279792 35279944 -110309344 + LTR33 LTR ERVL 44 197 -324 1270 174 5 5 chr10 35379994 35380213 -110209075 + AluJb SINE Alu 93 311 -1 304 344 16 60 chr10 35381420 35381670 -110207618 - L1ME LINE L1 -529 5637 5399 2504 68 0 0 chr10 35381892 35382201 -110207087 + AluSc SINE Alu 1 309 0 934 254 150 48 chr10 35382227 35382800 -110206488 - LTR50 LTR ERVL -91 704 1 276 291 0 0 chr10 35383058 35383144 -110206144 - MLT-int LTR MaLR -21 1714 1629 405 0 0 0 chr10 35383244 35383289 -110205999 + (CA)n Simple_repeat Simple_repeat 2 46 0 1798 238 92 21 chr10 35383547 35384207 -110205081 - L1 LINE L1 -2994 3152 2446 757 110 76 0 chr10 35384953 35385071 -110204217 - AluSg/x SINE Alu -13 299 173 21 0 0 0 chr10 35385824 35385845 -110203443 + AT_rich Low_complexity Low_complexity 1 21 0 1560 165 29 0 chr10 35386353 35386632 -110202656 - L1PA16 LINE L1 -6 6160 5874 517 292 39 35 chr10 35387203 35387463 -110201825 - L1MC4a LINE L1 -1972 5836 5576 456 167 0 108 chr10 35387546 35387666 -110201622 + L1M4 LINE L1 4521 4627 -1519 3757 103 2 0 chr10 35387709 35388203 -110201085 - MER1A DNA MER1_type 0 529 35 2513 225 42 3 chr10 35388225 35388870 -110200418 + L1M4 LINE L1 4663 5332 -814 2339 269 59 8 chr10 35388870 35389611 -110199677 + L1M3 LINE L1 934 1712 -5456 299 275 28 18 chr10 35389614 35389723 -110199565 + L1M3 LINE L1 1823 1932 -5236 4897 215 16 48 chr10 35389763 35391186 -110198102 + L1M3 LINE L1 3673 5049 -2118 * 20405 74 9 5 chr10 35391184 35395040 -110194248 + L1PA7 LINE L1 2282 6154 0 3038 182 78 18 chr10 35395037 35395806 -110193482 + L1M3 LINE L1 5036 5850 -1317 * 1232 221 0 0 chr10 35395827 35396049 -110193239 - AluJo SINE Alu -17 295 74 2165 181 58 66 chr10 35396068 35396356 -110192932 + L1M3 LINE L1 5868 6157 -1047 234 0 0 0 chr10 35396356 35396382 -110192906 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 2165 181 58 66 chr10 35396382 35396781 -110192507 + L1M3 LINE L1 6157 6550 -654 180 152 0 0 chr10 35396952 35396985 -110192303 + (TA)n Simple_repeat Simple_repeat 1 33 0 22 0 0 0 chr10 35397027 35397049 -110192239 + AT_rich Low_complexity Low_complexity 1 22 0 866 235 114 35 chr10 35397397 35397872 -110191416 + L1ME2 LINE L1 4946 5482 -682 270 0 0 0 chr10 35397872 35397902 -110191386 + (CA)n Simple_repeat Simple_repeat 2 31 0 866 235 114 35 chr10 35397902 35398024 -110191264 + L1ME2 LINE L1 5482 5593 -571 399 257 22 11 chr10 35398050 35398191 -110191097 + L1ME2 LINE L1 5999 6145 -17 1240 284 57 15 chr10 35398205 35398606 -110190682 + L1MC4a LINE L1 6348 6765 -1043 804 241 95 7 chr10 35398605 35398900 -110190388 + L1M4 LINE L1 5005 5325 -821 * 255 237 26 0 chr10 35398994 35399070 -110190218 + L1MC4 LINE L1 6995 7072 -970 224 304 25 13 chr10 35399074 35399153 -110190135 + GA-rich Low_complexity Low_complexity 3 82 0 1720 241 109 2 chr10 35399258 35399834 -110189454 + L1MC4 LINE L1 7277 7914 -128 226 276 102 0 chr10 35400033 35400131 -110189157 + L1M LINE L1 5261 5368 -2440 25 31 0 0 chr10 35400189 35400221 -110189067 + AT_rich Low_complexity Low_complexity 1 32 0 3411 150 28 5 chr10 35400221 35400833 -110188455 - L1MB3 LINE L1 -7 6176 5551 671 207 133 7 chr10 35400834 35400984 -110188304 - L1MCa LINE L1 -6228 198 30 331 164 0 0 chr10 35400988 35401049 -110188239 - L1MB8 LINE L1 -304 5874 5814 * 33257 37 18 8 chr10 35401043 35406042 -110183246 - L1PA4 LINE L1 -1 6154 1113 1701 199 6 3 chr10 35406068 35406404 -110182884 - L1MB8 LINE L1 -399 5785 5449 192 229 0 0 chr10 35406600 35406683 -110182605 + (TA)n Simple_repeat Simple_repeat 2 84 0 32 26 0 0 chr10 35406683 35406722 -110182566 + AT_rich Low_complexity Low_complexity 1 39 0 2568 95 5 19 chr10 35406753 35407131 -110182157 - L1PB3 LINE L1 0 6154 5782 358 220 14 35 chr10 35407131 35407272 -110182016 + (CATA)n Simple_repeat Simple_repeat 3 140 0 1545 203 14 3 chr10 35407304 35407653 -110181635 - L1MB8 LINE L1 -1034 5112 4760 * 2332 148 3 0 chr10 35407639 35408025 -110181263 - L1P LINE L1 -1028 5118 4732 246 260 127 27 chr10 35408015 35408165 -110181123 - L1MC/D LINE L1 -1943 5865 5701 * 913 200 17 6 chr10 35408430 35408610 -110180678 + MER5A DNA MER1_type 7 188 -1 308 243 19 39 chr10 35410208 35410311 -110178977 + MER5B DNA MER1_type 1 101 -77 244 200 0 0 chr10 35410305 35410345 -110178943 - MER5B DNA MER1_type -135 43 4 * 740 290 5 0 chr10 35410549 35410756 -110178532 + MER3 DNA MER1_type 1 208 -1 667 82 31 0 chr10 35411526 35411623 -110177665 - L1PA10 LINE L1 -3 6165 6066 21 82 0 0 chr10 35411641 35411690 -110177598 + AT_rich Low_complexity Low_complexity 1 49 0 5872 94 26 0 chr10 35412124 35413401 -110175887 - L1PA10 LINE L1 -107 6061 4757 21 0 0 0 chr10 35413800 35413821 -110175467 + AT_rich Low_complexity Low_complexity 1 21 0 229 360 10 10 chr10 35414400 35414500 -110174788 - MIR SINE MIR -160 102 3 1881 167 147 5 chr10 35414539 35414947 -110174341 - MER31B LTR ERV1 0 466 1 24 0 0 0 chr10 35415119 35415143 -110174145 + AT_rich Low_complexity Low_complexity 1 24 0 413 311 95 26 chr10 35416435 35416625 -110172663 - L3 LINE CR1 -49 1528 1326 665 311 4 13 chr10 35416979 35417207 -110172081 + L1MC3 LINE L1 6304 6529 -1256 264 228 0 0 chr10 35417200 35417257 -110172031 + L1MD3 LINE L1 7908 7964 -31 * 709 227 47 72 chr10 35418631 35419100 -110170188 + L1M4 LINE L1 7 1472 -4831 1118 95 71 0 chr10 35419100 35419269 -110170019 + L1PA14 LINE L1 5981 6161 0 2299 101 3 3 chr10 35419278 35419584 -110169704 + AluSx SINE Alu 3 308 -4 311 357 45 28 chr10 35421024 35421310 -110167978 - L1ME1 LINE L1 0 6166 5876 701 228 170 4 chr10 35422640 35422899 -110166389 + L1M4 LINE L1 4880 5181 -1201 1460 162 0 37 chr10 35422938 35423209 -110166079 - MLT1A1 LTR MaLR 0 365 105 609 246 0 0 chr10 35423213 35423339 -110165949 - HERVL74 LTR ERVL -2060 3625 3500 4366 218 90 21 chr10 35423361 35424818 -110164470 - HERVL74 LTR ERVL -2357 3328 1608 456 19 0 0 chr10 35424818 35424871 -110164417 + (TG)n Simple_repeat Simple_repeat 2 54 0 4366 218 90 21 chr10 35424871 35425424 -110163864 - HERVL74 LTR ERVL -4077 1608 1095 26 74 0 0 chr10 35425448 35425502 -110163786 + AT_rich Low_complexity Low_complexity 1 54 0 267 243 37 28 chr10 35425671 35425778 -110163510 - MER107 DNA MER1_type -22 175 68 1617 196 83 32 chr10 35426261 35426859 -110162429 - L1ME1 LINE L1 -325 5842 5188 3383 188 66 15 chr10 35426882 35426925 -110162363 - L1MB4 LINE L1 -65 6115 6076 3341 198 26 84 chr10 35426925 35427953 -110161335 + LTR5 LTR ERVK 1 969 0 3383 188 66 15 chr10 35427953 35429144 -110160144 - L1MB4 LINE L1 -104 6076 4834 618 234 137 26 chr10 35429183 35429409 -110159879 - L2 LINE L2 -1617 1697 1447 223 227 0 106 chr10 35429425 35429491 -110159797 - L2 LINE L2 0 3313 3255 514 152 235 0 chr10 35429494 35429626 -110159662 - L1ME LINE L1 -665 5499 5337 1890 189 52 14 chr10 35429651 35430106 -110159182 + L1MB4 LINE L1 5522 6004 -161 1501 195 81 0 chr10 35430898 35431205 -110158083 + L1PB4 LINE L1 5821 6152 -4 24 0 0 0 chr10 35433220 35433244 -110156044 + AT_rich Low_complexity Low_complexity 1 24 0 23 54 0 0 chr10 35433876 35433913 -110155375 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr10 35435142 35435163 -110154125 + AT_rich Low_complexity Low_complexity 1 21 0 184 314 39 0 chr10 35435259 35435310 -110153978 - L2 LINE L2 -87 3185 3133 2259 112 0 13 chr10 35435542 35435855 -110153433 + AluSx SINE Alu 4 312 0 216 111 0 0 chr10 35436473 35436509 -110152779 + (A)n Simple_repeat Simple_repeat 1 36 0 282 139 0 0 chr10 35437449 35437492 -110151796 + MER116 DNA Mariner 9 51 -29 22 35 0 0 chr10 35437498 35437527 -110151761 + AT_rich Low_complexity Low_complexity 1 29 0 721 278 120 0 chr10 35438029 35438238 -110151050 + MIR SINE MIR 3 236 -26 215 189 19 0 chr10 35438514 35438567 -110150721 + (CATATA)n Simple_repeat Simple_repeat 1 54 0 1975 141 7 0 chr10 35438781 35439085 -110150203 + AluSx SINE Alu 5 310 -2 218 270 61 108 chr10 35439181 35439329 -110149959 - MIR3 SINE MIR -52 156 16 22 35 0 0 chr10 35439723 35439752 -110149536 + AT_rich Low_complexity Low_complexity 1 29 0 996 164 145 38 chr10 35439962 35440193 -110149095 - L1ME1 LINE L1 -5 6161 5897 1366 89 38 60 chr10 35440193 35440428 -110148860 + MER30 DNA MER1_type 1 230 0 996 164 145 38 chr10 35440428 35440458 -110148830 - L1ME1 LINE L1 -269 5897 5872 2675 235 78 24 chr10 35441102 35442062 -110147226 + L1ME LINE L1 4238 5249 -897 637 168 17 13 chr10 35442069 35442201 -110147087 + L1ME LINE L1 5564 5689 -477 182 309 73 0 chr10 35442387 35442442 -110146846 - MIR SINE MIR -10 252 194 1971 142 35 0 chr10 35443226 35443508 -110145780 - AluSx SINE Alu -20 292 1 38081 69 5 10 chr10 35444643 35450825 -110138463 + L1PA5 LINE L1 5 6153 -1 24 0 0 0 chr10 35450841 35450865 -110138423 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr10 35451882 35451905 -110137383 + AT_rich Low_complexity Low_complexity 1 23 0 1956 143 3 34 chr10 35453160 35453481 -110135807 + AluSx SINE Alu 1 311 -1 299 289 0 87 chr10 35456478 35456582 -110132706 + L2 LINE L2 3218 3312 -1 473 271 25 0 chr10 35457319 35457441 -110131847 - MIR SINE MIR -52 210 86 879 125 0 7 chr10 35458682 35458818 -110130470 + MLT1A1 LTR MaLR 1 135 -230 2064 166 57 15 chr10 35458821 35459224 -110130064 + MSTB LTR MaLR 1 420 -6 1131 191 31 0 chr10 35459229 35459454 -110129834 + MLT1A1 LTR MaLR 133 364 -1 2154 105 14 7 chr10 35459979 35460274 -110129014 + AluSq SINE Alu 1 297 -16 218 342 174 5 chr10 35461080 35461209 -110128079 - L2 LINE L2 -510 2804 2698 204 45 23 45 chr10 35461209 35461253 -110128035 + (TTA)n Simple_repeat Simple_repeat 3 45 0 218 342 174 5 chr10 35461253 35461307 -110127981 - L2 LINE L2 -616 2698 2590 202 290 161 47 chr10 35461416 35461609 -110127679 - L2 LINE L2 -1007 2307 2093 520 169 260 24 chr10 35464622 35464868 -110124420 - MER33 DNA MER1_type -32 292 1 2484 114 28 2 chr10 35465240 35465634 -110123654 - L1MA2 LINE L1 0 6304 5901 358 240 107 117 chr10 35466010 35466402 -110122886 - L1ME4a LINE L1 -4 6117 5730 494 297 108 55 chr10 35466508 35466645 -110122643 - L1ME4a LINE L1 -429 5692 5564 2056 148 36 0 chr10 35466645 35466975 -110122313 - MER2 DNA MER2_type 0 344 3 494 297 108 55 chr10 35466975 35467218 -110122070 - L1ME4a LINE L1 -557 5564 5292 268 215 129 11 chr10 35467791 35467884 -110121404 - L2 LINE L2 -509 2805 2702 196 266 94 86 chr10 35468474 35468602 -110120686 + L2 LINE L2 2706 2834 -480 1940 142 27 0 chr10 35468623 35468919 -110120369 + AluSx SINE Alu 2 305 -7 1433 74 0 0 chr10 35469030 35469206 -110120082 + AluSc SINE Alu 128 303 -6 238 219 53 79 chr10 35470881 35470995 -110118293 + L2 LINE L2 1731 1841 -1473 1418 199 48 12 chr10 35471001 35471338 -110117950 - Tigger3b DNA MER2_type -3 1228 880 441 54 0 0 chr10 35471340 35471396 -110117892 + (TGAG)n Simple_repeat Simple_repeat 1 56 0 2179 141 125 44 chr10 35471470 35471691 -110117597 - Tigger3b DNA MER2_type -2492 536 334 2271 98 0 3 chr10 35471691 35471988 -110117300 + AluSc SINE Alu 1 296 -13 2179 141 125 44 chr10 35471988 35472262 -110117026 - Tigger3b DNA MER2_type -2694 334 1 250 294 44 62 chr10 35472667 35472827 -110116461 - L2 LINE L2 -193 3079 2923 325 353 98 0 chr10 35474075 35474208 -110115080 + L2 LINE L2 3116 3261 -11 432 244 0 0 chr10 35474211 35474293 -110114995 + AluJo SINE Alu 14 95 -217 1098 144 0 30 chr10 35474311 35474478 -110114810 - AluJb SINE Alu -16 296 135 566 204 86 38 chr10 35474478 35474664 -110114624 + AluJo SINE Alu 104 298 -14 358 238 91 62 chr10 35475327 35475537 -110113751 - LTR16C LTR ERVL 0 491 276 2407 58 3 3 chr10 35476945 35477236 -110112052 + AluY SINE Alu 1 291 -20 2013 134 14 0 chr10 35478478 35478770 -110110518 - AluSx SINE Alu -16 296 1 203 365 26 9 chr10 35478929 35479044 -110110244 - L2 LINE L2 -2564 750 634 324 0 0 0 chr10 35479060 35479096 -110110192 + (TG)n Simple_repeat Simple_repeat 2 37 0 617 250 43 0 chr10 35479424 35479564 -110109724 + MIR SINE MIR 116 261 -1 1888 138 140 6 chr10 35480124 35480473 -110108815 + MSTD LTR MaLR 1 396 0 360 325 60 7 chr10 35480802 35480953 -110108335 - MIR SINE MIR -79 183 25 25 51 0 0 chr10 35481430 35481469 -110107819 + AT_rich Low_complexity Low_complexity 1 39 0 402 269 10 0 chr10 35485291 35485395 -110103893 - MIR SINE MIR -73 135 31 341 286 107 74 chr10 35485597 35485988 -110103300 + L2 LINE L2 2081 2484 -830 319 212 59 47 chr10 35486056 35486226 -110103062 - Charlie7 DNA MER1_type -1 2611 2440 236 283 0 0 chr10 35486344 35486397 -110102891 + (TATATG)n Simple_repeat Simple_repeat 5 57 0 25 0 0 0 chr10 35488022 35488047 -110101241 + AT_rich Low_complexity Low_complexity 1 25 0 1803 160 14 0 chr10 35488053 35488340 -110100948 + AluJb SINE Alu 1 291 -21 584 244 124 16 chr10 35488564 35488757 -110100531 + MIR SINE MIR 14 227 -35 307 274 84 11 chr10 35488797 35488892 -110100396 - MIR SINE MIR -108 154 53 311 232 133 88 chr10 35489116 35489297 -110099991 + L1M2 LINE L1 1159 1347 -5502 336 290 206 61 chr10 35489329 35489628 -110099660 + L1M2 LINE L1 370 625 -6224 258 81 0 0 chr10 35489628 35489665 -110099623 + (CCCCCG)n Simple_repeat Simple_repeat 1 37 0 336 290 206 61 chr10 35489665 35490017 -110099271 + L1M2 LINE L1 625 1115 -5734 205 254 0 30 chr10 35491482 35491549 -110097739 + L2 LINE L2 3208 3272 0 347 151 0 41 chr10 35492272 35492345 -110096943 - MER94 DNA DNA -64 70 1 1084 143 71 91 chr10 35492955 35493207 -110096081 + AluJo SINE Alu 42 288 -24 279 0 0 0 chr10 35493379 35493410 -110095878 + (T)n Simple_repeat Simple_repeat 1 31 0 22 0 0 0 chr10 35494054 35494076 -110095212 + AT_rich Low_complexity Low_complexity 1 22 0 1434 136 33 0 chr10 35495497 35495711 -110093577 - AluSq SINE Alu -10 303 83 2265 110 0 3 chr10 35495741 35496042 -110093246 + AluSx SINE Alu 1 300 -12 434 263 120 0 chr10 35496043 35496176 -110093112 - MIR SINE MIR -113 149 1 807 208 76 0 chr10 35496285 35496429 -110092859 + FRAM SINE Alu 2 156 -10 2298 118 0 0 chr10 35496434 35496739 -110092549 - AluSx SINE Alu -7 305 1 397 380 88 0 chr10 35497167 35497372 -110091916 + L2 LINE L2 2818 3040 -273 5629 174 51 28 chr10 35497388 35498486 -110090802 + L1MB2 LINE L1 4004 5075 -1096 2217 125 0 0 chr10 35498486 35498789 -110090499 - AluSq SINE Alu -10 303 1 5629 174 51 28 chr10 35498789 35499119 -110090169 + L1MB2 LINE L1 5075 5396 -775 195 42 0 0 chr10 35499119 35499143 -110090145 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5629 174 51 28 chr10 35499143 35499831 -110089457 + L1MB2 LINE L1 5396 6171 0 368 300 119 19 chr10 35499831 35499991 -110089297 + L1MC4a LINE L1 6611 6786 -1022 356 287 36 24 chr10 35500351 35500518 -110088770 + L1MC4 LINE L1 6893 7061 -981 2124 138 3 0 chr10 35500574 35500872 -110088416 + AluSx SINE Alu 1 299 -13 433 264 126 45 chr10 35500896 35501278 -110088010 + L1MC5 LINE L1 7507 7919 -42 2116 124 0 7 chr10 35501329 35501628 -110087660 + AluSx SINE Alu 1 297 -15 185 262 131 0 chr10 35502405 35502489 -110086799 + L3 LINE CR1 692 786 -791 392 229 180 49 chr10 35503204 35503387 -110085901 + MIR SINE MIR 2 208 -54 301 339 52 31 chr10 35503672 35503864 -110085424 + L3b LINE CR1 1120 1315 -268 240 302 81 0 chr10 35504732 35504818 -110084470 + L3b LINE CR1 1392 1484 -99 1772 164 20 3 chr10 35505348 35505646 -110083642 + AluJo SINE Alu 1 303 -9 2310 82 14 7 chr10 35505732 35506026 -110083262 + AluSp SINE Alu 1 296 -17 22 0 0 0 chr10 35506608 35506630 -110082658 + AT_rich Low_complexity Low_complexity 1 22 0 922 128 0 0 chr10 35506635 35506760 -110082528 - AluJb SINE Alu -187 125 1 2244 168 20 74 chr10 35507163 35507650 -110081638 + LOR1b LTR ERV1 1 461 0 2478 85 0 3 chr10 35507907 35508212 -110081076 - AluSx SINE Alu -8 304 1 616 140 0 27 chr10 35509255 35509354 -110079934 + L1PB2 LINE L1 6024 6112 -39 2241 115 3 0 chr10 35509354 35509658 -110079630 - AluSg SINE Alu -5 305 1 616 140 0 27 chr10 35509658 35509696 -110079592 + L1PB2 LINE L1 6112 6150 -1 268 217 58 0 chr10 35509698 35509767 -110079521 + MER5C DNA MER1_type 52 124 -200 296 215 0 0 chr10 35509777 35509842 -110079446 + MER5C DNA MER1_type 226 290 -34 213 151 0 75 chr10 35509881 35509934 -110079354 + MER5C DNA MER1_type 273 321 -3 387 0 0 0 chr10 35510211 35510254 -110079034 + (TTTA)n Simple_repeat Simple_repeat 1 43 0 6362 49 1 4 chr10 35510255 35510988 -110078300 - L1PA6 LINE L1 -13 6141 5411 186 323 73 0 chr10 35510996 35511092 -110078196 - MIR SINE MIR -1 261 159 635 222 116 0 chr10 35511243 35511441 -110077847 + MIR SINE MIR 39 259 -3 2343 94 0 7 chr10 35511824 35512131 -110077157 + AluSx SINE Alu 1 305 -7 355 269 135 10 chr10 35512131 35512235 -110077053 + L2 LINE L2 3197 3313 0 1293 169 65 4 chr10 35513089 35513367 -110075921 - AluJo SINE Alu -17 295 1 266 200 0 0 chr10 35513428 35513473 -110075815 + L3 LINE CR1 1526 1570 -7 967 203 0 0 chr10 35514189 35514347 -110074941 - FRAM SINE Alu -8 158 1 250 319 0 0 chr10 35514348 35514417 -110074871 + L2 LINE L2 3245 3313 0 1759 124 0 12 chr10 35514467 35514717 -110074571 - AluSx SINE Alu -11 301 55 185 289 26 0 chr10 35514741 35514779 -110074509 + L2 LINE L2 3147 3185 -87 369 235 118 0 chr10 35515088 35515241 -110074047 + L1ME4a LINE L1 5713 5883 -238 440 247 114 55 chr10 35515247 35515518 -110073770 + MLT1L LTR MaLR 2 288 -327 247 248 57 67 chr10 35515972 35516077 -110073211 + MLT1L LTR MaLR 504 607 -8 342 167 8 108 chr10 35516141 35516261 -110073027 + L1ME4a LINE L1 6007 6114 -7 1956 135 7 3 chr10 35516272 35516561 -110072727 - AluSx SINE Alu -22 290 1 2143 107 10 3 chr10 35516828 35517127 -110072161 + AluSq SINE Alu 1 301 -12 223 261 87 33 chr10 35517160 35517252 -110072036 - MIR SINE MIR -54 208 112 413 207 12 0 chr10 35517394 35517476 -110071812 - MLT1K LTR MaLR -14 574 492 1047 258 9 0 chr10 35518058 35518271 -110071017 - MER58A DNA MER1_type -1 223 9 1785 161 20 7 chr10 35518571 35518875 -110070413 + AluJb SINE Alu 1 308 -4 1884 126 13 31 chr10 35519671 35519988 -110069300 - AluJb SINE Alu -1 311 1 207 0 0 0 chr10 35520449 35520472 -110068816 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 1147 195 26 4 chr10 35520609 35520835 -110068453 - L1MB3 LINE L1 0 6183 5953 2502 142 10 116 chr10 35520953 35521110 -110068178 - L1MB3 LINE L1 -210 5973 5801 2216 120 0 0 chr10 35521110 35521410 -110067878 - AluSx SINE Alu -12 300 1 2502 142 10 116 chr10 35521410 35521669 -110067619 - L1MB3 LINE L1 -382 5801 5634 1972 158 0 0 chr10 35521669 35521980 -110067308 - AluSx SINE Alu -1 311 1 2502 142 10 116 chr10 35521980 35522148 -110067140 - L1MB3 LINE L1 -549 5634 5450 523 115 26 0 chr10 35523233 35523311 -110065977 - L1MC1 LINE L1 0 6333 6254 2358 155 86 41 chr10 35523316 35523512 -110065776 - L1MC3 LINE L1 -661 5683 5497 2125 134 0 0 chr10 35523512 35523804 -110065484 - AluSx SINE Alu -20 292 1 2358 155 86 41 chr10 35523804 35524199 -110065089 - L1MC3 LINE L1 -847 5497 5302 2700 92 3 72 chr10 35524199 35524588 -110064700 - THE1B LTR MaLR -2 362 1 2358 155 86 41 chr10 35524588 35524731 -110064557 - L1MC3 LINE L1 -1042 5302 5167 1822 164 29 0 chr10 35525035 35525336 -110063952 + AluSx SINE Alu 1 309 0 1603 169 14 14 chr10 35525362 35525657 -110063631 + L1MC2 LINE L1 6041 6335 -9 2183 105 14 0 chr10 35525871 35526157 -110063131 - AluSg SINE Alu -20 290 1 4783 81 24 5 chr10 35526392 35527020 -110062268 - L1PA13 LINE L1 0 6163 5524 327 259 68 68 chr10 35527020 35527167 -110062121 + MLT1E1 LTR MaLR 4 150 -504 1324 188 84 82 chr10 35527228 35527595 -110061693 + MLT1E1 LTR MaLR 287 654 0 268 298 47 35 chr10 35528305 35528476 -110060812 + HAL1 LINE L1 1179 1351 -1156 306 157 0 0 chr10 35528513 35528564 -110060724 - LTR40b LTR ERVL 0 462 412 2136 108 17 0 chr10 35528965 35529253 -110060035 + AluSg SINE Alu 1 293 -17 327 49 0 0 chr10 35529253 35529294 -110059994 + (TA)n Simple_repeat Simple_repeat 2 42 0 1616 188 10 16 chr10 35529425 35529734 -110059554 + AluJb SINE Alu 1 307 -5 1209 167 12 124 chr10 35529908 35530238 -110059050 - MLT1A1 LTR MaLR 0 365 73 2205 125 0 0 chr10 35530259 35530563 -110058725 - AluSp SINE Alu -9 304 1 1810 158 0 7 chr10 35530569 35530853 -110058435 - L1PA16 LINE L1 -11 6155 5874 9559 182 29 9 chr10 35530853 35533198 -110056090 - L1PA16 LINE L1 -508 5658 3268 1623 272 35 2 chr10 35533199 35533718 -110055570 + L1PA16 LINE L1 2725 3260 -2886 378 165 25 25 chr10 35533718 35533797 -110055491 - MLT1A1 LTR MaLR -344 84 6 384 275 116 51 chr10 35534208 35534484 -110054804 + L1MC4a LINE L1 5613 5906 -1902 744 155 16 16 chr10 35534530 35534659 -110054629 + FLAM_C SINE Alu 2 130 -3 227 270 90 18 chr10 35534684 35534795 -110054493 + L1ME4a LINE L1 5978 6096 -25 2583 113 5 24 chr10 35534834 35535205 -110054083 - THE1B LTR MaLR 0 364 1 3509 167 16 18 chr10 35535207 35535813 -110053475 + MER6A DNA MER2_type 1 605 0 2106 112 3 14 chr10 35536511 35536825 -110052463 - AluSq SINE Alu 0 313 1 1353 124 9 40 chr10 35536827 35537052 -110052236 - AluJo SINE Alu -17 295 78 253 174 158 0 chr10 35537968 35538040 -110051248 - MIR SINE MIR -77 131 49 2077 136 0 0 chr10 35538449 35538751 -110050537 + AluSx SINE Alu 1 302 -10 2175 118 3 0 chr10 35539059 35539355 -110049933 - AluSx SINE Alu -15 297 1 1687 148 7 40 chr10 35539519 35539654 -110049634 + AluJb SINE Alu 1 139 -173 2094 86 3 46 chr10 35539654 35540137 -110049151 + AluSq SINE Alu 1 470 0 1124 6 22 50 chr10 35539957 35540180 -110049108 + (TAAAA)n Simple_repeat Simple_repeat 3 220 0 1687 148 7 40 chr10 35540137 35540339 -110048949 + AluJb SINE Alu 139 288 -24 23 68 0 0 chr10 35540471 35540515 -110048773 + AT_rich Low_complexity Low_complexity 1 44 0 183 295 158 21 chr10 35541967 35542062 -110047226 - MIR SINE MIR -108 154 47 1751 155 3 3 chr10 35542915 35543199 -110046089 - AluJo SINE Alu -8 304 21 6040 78 24 63 chr10 35543282 35544232 -110045056 + L1PA11 LINE L1 5266 6174 0 2298 97 0 7 chr10 35544646 35544944 -110044344 + AluSg SINE Alu 1 296 -14 5282 128 63 73 chr10 35545057 35546184 -110043104 + pTR5 LTR ERV1 742 2029 -409 305 152 58 68 chr10 35546184 35546287 -110043001 + LTR30 LTR ERV1 377 475 -94 1146 151 59 0 chr10 35546287 35546473 -110042815 + LTR12 LTR ERV1 385 581 -133 1447 190 3 40 chr10 35546522 35546801 -110042487 + AluJo SINE Alu 1 270 -32 2224 108 0 0 chr10 35546801 35547096 -110042192 - AluSq SINE Alu -18 295 1 1447 190 3 40 chr10 35547096 35547116 -110042172 + AluJo SINE Alu 270 289 -13 2157 143 33 6 chr10 35548394 35548759 -110040529 - THE1C LTR MaLR 0 375 1 762 238 38 0 chr10 35549103 35549288 -110040000 - L1MC/D LINE L1 -1986 5822 5631 26 0 0 0 chr10 35549579 35549605 -110039683 + AT_rich Low_complexity Low_complexity 1 26 0 309 219 21 42 chr10 35549737 35549833 -110039455 - HAL1b LINE L1 -989 359 266 258 108 0 0 chr10 35550157 35550194 -110039094 + MSTA LTR MaLR 247 283 -145 806 141 8 0 chr10 35550628 35550749 -110038539 + FLAM_C SINE Alu 2 123 -10 21 0 0 0 chr10 35550749 35550770 -110038518 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr10 35551735 35551764 -110037524 + AT_rich Low_complexity Low_complexity 1 29 0 5406 43 1 1 chr10 35551774 35552421 -110036867 - L1PA8 LINE L1 -7 6165 5519 225 299 0 0 chr10 35552861 35552938 -110036350 - MLT1I LTR MaLR -229 180 104 1046 140 7 0 chr10 35553031 35553181 -110036107 + AluSq/x SINE Alu 1 151 -161 529 240 12 8 chr10 35553183 35553308 -110035980 + L1PB4 LINE L1 6030 6151 0 441 244 64 58 chr10 35553492 35553556 -110035732 - MIR SINE MIR -73 189 127 2430 98 0 0 chr10 35553556 35553863 -110035425 + AluSx SINE Alu 1 307 -5 441 244 64 58 chr10 35553863 35553954 -110035334 - MIR SINE MIR -135 127 33 747 151 8 8 chr10 35555186 35555305 -110033983 + FLAM_C SINE Alu 9 127 -16 180 0 0 0 chr10 35555306 35555326 -110033962 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 202 146 0 24 chr10 35555614 35555655 -110033633 + (TTTAA)n Simple_repeat Simple_repeat 4 43 0 1894 148 26 7 chr10 35556248 35556679 -110032609 - AluSx SINE Alu 0 437 1 490 216 29 22 chr10 35556822 35556961 -110032327 - MLT1J2 LTR MaLR -290 160 21 339 285 33 117 chr10 35557048 35557419 -110031869 + L2 LINE L2 2746 3089 -183 324 265 20 41 chr10 35557539 35557637 -110031651 - MLT1J2 LTR MaLR -18 432 337 488 377 0 0 chr10 35559356 35559510 -110029778 + MIR3 SINE MIR 44 197 -11 1267 61 0 11 chr10 35560140 35560320 -110028968 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 2176 99 0 14 chr10 35560320 35560604 -110028684 - AluSq SINE Alu -33 280 1 531 220 75 61 chr10 35560813 35561054 -110028234 - LTR1B LTR ERV1 -383 443 149 1673 176 19 38 chr10 35561275 35561588 -110027700 - AluJo SINE Alu -1 311 5 1961 162 0 13 chr10 35561642 35561951 -110027337 - AluJb SINE Alu -7 305 1 189 0 0 0 chr10 35562365 35562386 -110026902 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 1925 141 0 7 chr10 35562721 35563005 -110026283 - AluJo SINE Alu -30 282 1 315 273 126 22 chr10 35563393 35563576 -110025712 - MIR SINE MIR -17 245 44 1835 166 0 10 chr10 35563903 35564205 -110025083 - AluJb SINE Alu -13 299 1 22 35 0 0 chr10 35565828 35565857 -110023431 + AT_rich Low_complexity Low_complexity 1 29 0 1819 131 0 0 chr10 35565858 35566117 -110023171 + AluSx SINE Alu 47 305 -7 21 0 0 0 chr10 35566172 35566193 -110023095 + AT_rich Low_complexity Low_complexity 1 21 0 1787 113 0 4 chr10 35566290 35566537 -110022751 - AluSg/x SINE Alu 0 310 65 1268 152 0 33 chr10 35566832 35567036 -110022252 + AluJb SINE Alu 86 284 -28 2301 104 3 3 chr10 35567036 35567334 -110021954 - AluSg SINE Alu -12 298 1 25 0 0 0 chr10 35567341 35567366 -110021922 + AT_rich Low_complexity Low_complexity 1 25 0 2117 123 0 16 chr10 35568606 35568916 -110020372 - AluJb SINE Alu -7 305 1 3654 184 124 33 chr10 35568979 35570383 -110018905 + MER52A LTR ERV1 2 1755 0 296 319 115 6 chr10 35570402 35570559 -110018729 + MIR SINE MIR 66 239 -23 1859 166 3 10 chr10 35570952 35571260 -110018028 + AluJo SINE Alu 1 306 -6 540 267 91 9 chr10 35571926 35572136 -110017152 - MIR SINE MIR -24 238 12 2094 146 0 0 chr10 35572227 35572535 -110016753 + AluJb SINE Alu 1 308 -4 258 136 0 0 chr10 35572543 35572587 -110016701 + (GGAA)n Simple_repeat Simple_repeat 3 46 0 1111 184 209 0 chr10 35574784 35575041 -110014247 + AluJb SINE Alu 1 306 0 21 71 0 0 chr10 35575262 35575304 -110013984 + AT_rich Low_complexity Low_complexity 1 42 0 594 187 28 0 chr10 35575380 35575487 -110013801 + FLAM_C SINE Alu 2 111 -32 279 0 0 0 chr10 35575488 35575519 -110013769 + (TC)n Simple_repeat Simple_repeat 2 32 0 234 0 0 0 chr10 35575518 35575544 -110013744 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 2508 64 0 3 chr10 35575545 35575841 -110013447 - AluY SINE Alu -16 295 1 246 296 28 0 chr10 35576016 35576087 -110013201 - MIR SINE MIR -177 85 13 367 306 104 2 chr10 35576961 35577134 -110012154 - MIR3 SINE MIR 0 208 18 1250 96 0 0 chr10 35577304 35577471 -110011817 - AluSg/x SINE Alu -9 301 135 2519 157 6 66 chr10 35577654 35578106 -110011182 - LTR24 LTR ERV1 0 467 46 2145 131 0 28 chr10 35578106 35578427 -110010861 + AluSx SINE Alu 1 312 0 2519 157 6 66 chr10 35578427 35578471 -110010817 - LTR24 LTR ERV1 -421 46 1 1792 130 15 52 chr10 35578507 35578616 -110010672 + AluSx SINE Alu 1 113 -199 2296 108 0 19 chr10 35578616 35578932 -110010356 + AluSg SINE Alu 1 310 0 1792 130 15 52 chr10 35578932 35579146 -110010142 + AluSx SINE Alu 113 312 0 3297 147 24 17 chr10 35579354 35579529 -110009759 - LTR49 LTR ERV1 0 595 423 970 77 7 28 chr10 35579529 35579672 -110009616 - L1PA10 LINE L1 0 6168 6029 3297 147 24 17 chr10 35579672 35580087 -110009201 - LTR49 LTR ERV1 -172 423 1 1452 159 7 43 chr10 35580429 35580730 -110008558 - LTR1 LTR ERV1 -495 290 1 1103 112 19 9 chr10 35580730 35580888 -110008400 - L1PB3 LINE L1 -198 5953 5802 294 73 0 0 chr10 35580888 35580929 -110008359 + (TG)n Simple_repeat Simple_repeat 1 41 0 1103 112 19 9 chr10 35580929 35580956 -110008332 - L1PB3 LINE L1 -349 5802 5777 272 257 20 20 chr10 35580956 35581057 -110008231 + (TATG)n Simple_repeat Simple_repeat 3 103 0 1544 103 13 13 chr10 35581057 35581069 -110008219 - L1PB3 LINE L1 -363 5791 5780 183 42 0 0 chr10 35581069 35581093 -110008195 + (TC)n Simple_repeat Simple_repeat 1 24 0 1544 103 13 13 chr10 35581093 35581313 -110007975 - L1PB3 LINE L1 -373 5781 5559 3697 138 43 129 chr10 35581313 35582836 -110006452 + pTR5 LTR ERV1 744 2606 0 831 149 8 8 chr10 35582836 35582970 -110006318 + pTR5 LTR ERV1 270 403 -2035 2707 173 59 1 chr10 35582970 35583795 -110005493 - L1PB3 LINE L1 -613 5541 4668 792 134 195 0 chr10 35583798 35583947 -110005341 - LTR29 LTR ERV1 -285 337 160 616 172 10 0 chr10 35583976 35584075 -110005213 - AluJ/FLAM SINE Alu -211 101 2 297 309 62 48 chr10 35586730 35586940 -110002348 - MIR SINE MIR -3 259 47 1667 166 14 21 chr10 35587220 35587541 -110001747 + AluJo SINE Alu 1 319 0 3328 151 24 12 chr10 35588229 35588804 -110000484 - LTR49 LTR ERV1 -13 582 1 912 192 30 0 chr10 35589131 35589298 -109999990 - FRAM SINE Alu 0 176 5 3532 130 6 6 chr10 35589298 35589822 -109999466 + MER41B LTR ERV1 5 528 -107 24 32 0 0 chr10 35589828 35589859 -109999429 + AT_rich Low_complexity Low_complexity 1 31 0 854 84 42 0 chr10 35590713 35590832 -109998456 + MER41B LTR ERV1 512 635 0 257 269 0 0 chr10 35590843 35590910 -109998378 - MIR SINE MIR -56 152 86 421 288 59 51 chr10 35591582 35591818 -109997470 + Charlie8 DNA MER1_type 2 239 -2178 4600 86 13 0 chr10 35592003 35592623 -109996665 - L1PB2 LINE L1 -2 6149 5522 277 379 26 9 chr10 35592650 35592766 -109996522 - L2 LINE L2 -1 3312 3195 1889 204 105 11 chr10 35593076 35593428 -109995860 + MLT1D LTR MaLR 3 409 -96 1731 159 3 36 chr10 35593428 35593729 -109995559 - AluJo SINE Alu -21 291 1 1889 204 105 11 chr10 35593729 35593833 -109995455 + MLT1D LTR MaLR 409 502 -3 4180 102 14 55 chr10 35594724 35595251 -109994037 + L1MA3 LINE L1 5637 6131 -174 2165 106 6 39 chr10 35595251 35595562 -109993726 + AluSx SINE Alu 3 303 -9 4180 102 14 55 chr10 35595562 35595722 -109993566 + L1MA3 LINE L1 6131 6296 -9 2090 131 89 6 chr10 35596474 35596810 -109992478 + THE1B LTR MaLR 1 364 0 313 312 76 19 chr10 35597355 35597460 -109991828 + MIR SINE MIR 55 173 -89 2274 150 44 3 chr10 35597460 35597847 -109991441 + MER57A LTR ERV1 1 403 0 313 312 76 19 chr10 35597847 35597898 -109991390 + MIR SINE MIR 173 220 -42 2439 90 0 0 chr10 35597971 35598271 -109991017 + AluSq SINE Alu 1 300 -13 768 176 68 7 chr10 35598410 35598558 -109990730 + MER58A DNA MER1_type 37 193 -31 2191 132 0 0 chr10 35598562 35598872 -109990416 - AluSx SINE Alu -2 310 1 578 291 94 0 chr10 35598945 35599158 -109990130 - MLT1J LTR MaLR -278 233 1 947 195 95 0 chr10 35599373 35599573 -109989715 - MER20 DNA MER1_type 0 219 1 323 271 62 10 chr10 35600022 35600118 -109989170 - MER5A DNA MER1_type -8 181 81 1992 153 0 0 chr10 35601079 35601380 -109987908 + AluSx SINE Alu 1 301 -11 242 291 19 12 chr10 35601452 35601547 -109987741 + T-rich Low_complexity Low_complexity 2 163 0 625 112 0 35 chr10 35601712 35601828 -109987460 + (TTCC)n Simple_repeat Simple_repeat 2 113 0 777 186 23 0 chr10 35601858 35601987 -109987301 - FLAM_C SINE Alu 0 133 2 2481 176 32 0 chr10 35602457 35602889 -109986399 - MLT1C LTR MaLR 0 467 22 363 229 25 42 chr10 35602962 35603080 -109986208 - MER96B DNA MER1_type? -2 415 300 1301 195 74 27 chr10 35603107 35603405 -109985883 - AluJo SINE Alu 0 312 1 300 185 0 49 chr10 35603406 35603487 -109985801 - MER96B DNA MER1_type? -100 317 241 198 0 0 0 chr10 35603886 35603908 -109985380 + (T)n Simple_repeat Simple_repeat 1 22 0 5223 147 18 23 chr10 35604188 35605096 -109984192 + MER4D LTR ERV1 1 903 0 2550 116 6 3 chr10 35605714 35606077 -109983211 - THE1B LTR MaLR 0 364 1 347 272 72 50 chr10 35606149 35606329 -109982959 + MIR3 SINE MIR 23 206 -2 228 330 0 9 chr10 35607303 35607409 -109981879 + (CA)n Simple_repeat Simple_repeat 1 105 0 2366 93 0 0 chr10 35607419 35607710 -109981578 - AluSx SINE Alu -19 293 3 1196 106 12 0 chr10 35608015 35608175 -109981113 + FRAM SINE Alu 2 163 -13 2194 113 0 0 chr10 35608406 35608699 -109980589 - AluSx SINE Alu -19 293 1 2210 204 81 38 chr10 35609167 35609312 -109979976 + MLT1E3 LTR MaLR 7 144 -480 2073 129 0 0 chr10 35609312 35609689 -109979599 + AluSc SINE Alu 1 377 0 2210 204 81 38 chr10 35609689 35610126 -109979162 + MLT1E3 LTR MaLR 144 615 -9 1411 162 128 26 chr10 35611174 35611440 -109977848 - AluJo SINE Alu -16 296 4 2226 125 3 0 chr10 35611499 35611810 -109977478 - AluSx SINE Alu 0 312 1 4537 131 10 19 chr10 35612164 35612520 -109976768 - L1PB3 LINE L1 -4 6150 5792 420 20 0 0 chr10 35612520 35612569 -109976719 + (TG)n Simple_repeat Simple_repeat 1 49 0 2765 99 0 0 chr10 35612569 35612931 -109976357 + THE1B LTR MaLR 3 364 0 4537 131 10 19 chr10 35612931 35613293 -109975995 - L1PB3 LINE L1 -360 5794 5438 430 174 35 0 chr10 35613941 35614027 -109975261 + MER81 DNA DNA 26 114 0 383 244 0 0 chr10 35614147 35614237 -109975051 + MLT1J LTR MaLR 415 504 -7 265 85 213 0 chr10 35615345 35615392 -109973896 - AluJo SINE Alu -4 298 242 1217 158 15 0 chr10 35615392 35615588 -109973700 - AluJo SINE Alu -113 199 1 1743 184 0 13 chr10 35616308 35616612 -109972676 + AluJo SINE Alu 1 300 -12 359 352 31 0 chr10 35618127 35618255 -109971033 - L2 LINE L2 0 3272 3141 328 53 0 105 chr10 35618300 35618357 -109970931 + L1MA3 LINE L1 6255 6305 0 681 297 32 11 chr10 35618705 35618890 -109970398 - MLT1I LTR MaLR -188 221 33 22 35 0 0 chr10 35620033 35620062 -109969226 + AT_rich Low_complexity Low_complexity 1 29 0 1880 176 0 3 chr10 35620548 35620850 -109968438 - AluJo SINE Alu -11 301 1 2556 115 8 8 chr10 35622019 35622394 -109966894 + THE1C LTR MaLR 1 375 0 276 313 77 66 chr10 35622710 35623180 -109966108 - L2 LINE L2 -1117 2197 1723 773 171 0 0 chr10 35623214 35623337 -109965951 - FLAM_C SINE Alu -20 123 1 3070 113 9 0 chr10 35623510 35623960 -109965328 + L1PA16 LINE L1 5704 6157 -9 442 286 136 14 chr10 35623979 35624192 -109965096 - MIR SINE MIR -21 241 3 1583 113 12 8 chr10 35624341 35624598 -109964690 + MER6 DNA MER2_type 319 836 -29 1757 148 26 23 chr10 35625236 35625540 -109963748 - AluJo SINE Alu -3 309 5 2143 123 50 36 chr10 35626901 35627260 -109962028 + THE1B LTR MaLR 1 364 0 219 265 20 34 chr10 35627888 35628035 -109961253 + (TATAA)n Simple_repeat Simple_repeat 5 149 0 2534 139 23 77 chr10 35629169 35629778 -109959510 - MER4E LTR ERV1 0 779 1 186 43 0 0 chr10 35629803 35629826 -109959462 + (TTCTCC)n Simple_repeat Simple_repeat 1 23 0 1725 178 0 17 chr10 35629826 35630124 -109959164 - AluJb SINE Alu -9 303 11 24 32 0 0 chr10 35630200 35630231 -109959057 + AT_rich Low_complexity Low_complexity 1 31 0 3067 235 35 34 chr10 35630619 35630813 -109958475 - L1ME1 LINE L1 -14 6152 5960 379 82 0 184 chr10 35630813 35630911 -109958377 - MADE1 DNA Mariner 0 80 1 3067 235 35 34 chr10 35630911 35631687 -109957601 - L1ME1 LINE L1 -206 5960 5182 1577 153 73 11 chr10 35631745 35632020 -109957268 - AluJo SINE Alu -20 292 1 1472 196 41 4 chr10 35632786 35633057 -109956231 + AluJo SINE Alu 6 286 -26 222 62 0 0 chr10 35633062 35633094 -109956194 + (CATA)n Simple_repeat Simple_repeat 2 33 0 186 43 0 0 chr10 35633690 35633713 -109955575 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 1395 164 0 9 chr10 35634661 35634875 -109954413 - AluSg/x SINE Alu -16 296 85 2486 156 95 5 chr10 35636089 35636574 -109952714 - MER61D LTR ERV1 0 734 1 1728 236 52 82 chr10 35636994 35637553 -109951735 + MLT1F1 LTR MaLR 1 567 0 302 309 16 8 chr10 35637553 35637679 -109951609 + L1ME4a LINE L1 5748 5874 -247 21 36 0 0 chr10 35638042 35638070 -109951218 + AT_rich Low_complexity Low_complexity 1 28 0 1893 153 3 0 chr10 35638128 35638416 -109950872 + AluSx SINE Alu 20 308 -4 2427 199 125 61 chr10 35638649 35639425 -109949863 + LTR1B LTR ERV1 1 826 0 188 316 246 6 chr10 35639884 35640055 -109949233 + MIR SINE MIR 40 251 -11 216 0 0 0 chr10 35640449 35640473 -109948815 + (T)n Simple_repeat Simple_repeat 1 24 0 562 283 50 30 chr10 35640849 35641047 -109948241 - MIR SINE MIR -33 229 28 595 337 104 19 chr10 35642820 35643233 -109946055 - L3b LINE CR1 -11 1572 1125 268 136 0 0 chr10 35644306 35644350 -109944938 + MADE1 DNA Mariner 1 44 -36 2054 98 28 0 chr10 35644366 35644653 -109944635 - L1PA10 LINE L1 -8 6160 5866 338 77 0 19 chr10 35644653 35644705 -109944583 + MADE1 DNA Mariner 30 80 0 252 343 66 29 chr10 35645093 35645230 -109944058 - MIR3 SINE MIR -30 178 37 260 297 25 25 chr10 35646339 35646457 -109942831 + L3 LINE CR1 1390 1507 -70 2150 124 0 0 chr10 35647599 35647890 -109941398 + AluSg SINE Alu 1 291 -19 186 322 17 0 chr10 35647978 35648037 -109941251 + MIR SINE MIR 82 141 -67 234 229 152 76 chr10 35648938 35649043 -109940245 - MIR SINE MIR -62 146 34 266 261 0 14 chr10 35650642 35650711 -109938577 - MIR3 SINE MIR -52 156 89 225 253 10 111 chr10 35650867 35650966 -109938322 - MER5A DNA MER1_type -13 176 88 211 313 45 0 chr10 35651874 35651941 -109937347 + MIR SINE MIR 42 111 -97 463 293 100 30 chr10 35652129 35652399 -109936889 + L3b LINE CR1 1129 1417 -166 1252 241 96 14 chr10 35652438 35652803 -109936485 - MLT1G LTR MaLR -1 589 195 4315 180 8 25 chr10 35652879 35653730 -109935558 - L1MA10 LINE L1 0 6334 5498 749 143 0 0 chr10 35653730 35653842 -109935446 + L1MA10 LINE L1 5370 5481 -831 356 315 64 28 chr10 35653842 35654022 -109935266 - MLT1G LTR MaLR -364 191 9 216 268 121 76 chr10 35654049 35654206 -109935082 - L2 LINE L2 0 3272 3109 737 282 4 61 chr10 35655183 35655460 -109933828 - MIR SINE MIR -1 261 1 1777 186 0 0 chr10 35655526 35655838 -109933450 - AluSx SINE Alu 0 312 1 195 353 73 0 chr10 35655957 35656025 -109933263 - L2 LINE L2 0 3272 3200 1864 87 65 4 chr10 35656249 35656525 -109932763 - AluSg SINE Alu -17 293 1 379 235 118 15 chr10 35656528 35656664 -109932624 - MIR SINE MIR -7 255 106 1477 195 0 17 chr10 35656837 35657124 -109932164 - AluJo SINE Alu -20 292 11 25 0 0 0 chr10 35658840 35658865 -109930423 + AT_rich Low_complexity Low_complexity 1 25 0 573 140 0 65 chr10 35658865 35658972 -109930316 - FRAM SINE Alu -15 161 62 1692 141 60 20 chr10 35659451 35659750 -109929538 + AluSx SINE Alu 1 311 -1 837 169 29 3 chr10 35660148 35660471 -109928817 + CT-rich Low_complexity Low_complexity 1 331 0 917 168 7 0 chr10 35660475 35660630 -109928658 - AluSg/x SINE Alu -32 278 123 2157 72 0 10 chr10 35660645 35660936 -109928352 - AluY SINE Alu -16 295 8 262 340 31 0 chr10 35661258 35661355 -109927933 + MIR3 SINE MIR 58 157 -51 418 156 0 13 chr10 35662661 35662738 -109926550 + MER116 DNA Mariner 1 76 -4 778 187 7 14 chr10 35662939 35663078 -109926210 + AluJo SINE Alu 2 139 -173 1590 191 29 38 chr10 35663506 35663623 -109925665 - MER1B DNA MER1_type -2373 337 220 2367 80 0 0 chr10 35663623 35663923 -109925365 - AluSc SINE Alu -9 300 1 1590 191 29 38 chr10 35663923 35664145 -109925143 - MER1B DNA MER1_type -2490 220 1 207 250 59 15 chr10 35664176 35664244 -109925044 - L3b LINE CR1 -231 1352 1282 249 314 80 40 chr10 35664518 35664559 -109924729 + L2 LINE L2 2565 2603 -711 1554 169 47 14 chr10 35664559 35664855 -109924433 - AluJo SINE Alu -6 306 1 249 314 80 40 chr10 35664855 35664988 -109924300 + L2 LINE L2 2603 2746 -568 227 280 136 30 chr10 35665094 35665226 -109924062 + L2 LINE L2 2933 3078 -194 4374 64 4 0 chr10 35665266 35665812 -109923476 - L1PA7 LINE L1 -16 6138 5591 2339 147 26 8 chr10 35666781 35667161 -109922127 + LTR45B LTR ERV1 3 389 -100 2989 177 34 72 chr10 35667208 35667887 -109921401 + L1PB4 LINE L1 5493 6145 -11 180 0 0 0 chr10 35667888 35667908 -109921380 + (CAAT)n Simple_repeat Simple_repeat 2 21 0 2187 131 0 0 chr10 35667999 35668311 -109920977 - AluSx SINE Alu 0 312 1 333 288 58 63 chr10 35669243 35669434 -109919854 - MIR SINE MIR -67 195 6 253 322 0 0 chr10 35670001 35670060 -109919228 - L2 LINE L2 -86 3186 3128 321 288 8 68 chr10 35670215 35670333 -109918955 - L2 LINE L2 0 3313 3203 186 167 0 0 chr10 35670781 35670817 -109918471 + A-rich Low_complexity Low_complexity 2 37 0 2131 106 3 0 chr10 35671016 35671309 -109917979 + AluSp SINE Alu 2 295 -18 2247 167 83 2 chr10 35671985 35672171 -109917117 - MSTC LTR MaLR 0 428 258 2162 95 0 10 chr10 35672171 35672475 -109916813 - AluSc SINE Alu -8 301 1 2247 167 83 2 chr10 35672475 35672684 -109916604 - MSTC LTR MaLR -170 258 1 305 260 96 39 chr10 35672745 35672836 -109916452 + L2 LINE L2 3203 3302 -11 1956 118 28 0 chr10 35672836 35673124 -109916164 + AluSx SINE Alu 5 300 -12 305 260 96 39 chr10 35673124 35673136 -109916152 + L2 LINE L2 3302 3312 -1 265 285 51 51 chr10 35673242 35673379 -109915909 - MER5B DNA MER1_type 0 178 42 * 269 328 0 0 chr10 35673367 35673428 -109915860 + L2 LINE L2 3128 3188 -84 2194 107 0 7 chr10 35674048 35674357 -109914931 + AluSx SINE Alu 1 307 -5 235 227 0 30 chr10 35674602 35674668 -109914620 + GA-rich Low_complexity Low_complexity 4 67 0 25 0 0 0 chr10 35675337 35675362 -109913926 + AT_rich Low_complexity Low_complexity 1 25 0 2124 87 3 17 chr10 35676279 35676577 -109912711 + AluSq SINE Alu 1 294 -19 284 217 12 12 chr10 35676804 35676887 -109912401 - MLT1J1 LTR MaLR 0 446 364 2355 66 0 10 chr10 35676888 35677191 -109912097 + AluY SINE Alu 1 300 -11 1899 119 35 0 chr10 35677292 35677578 -109911710 - AluY SINE Alu -15 296 1 234 160 40 20 chr10 35677661 35677705 -109911583 - MLT1J2 LTR MaLR -283 167 123 982 251 103 13 chr10 35677705 35678139 -109911149 - MLT1G1 LTR MaLR -2 593 38 395 206 27 0 chr10 35678765 35678838 -109910450 - L2 LINE L2 0 3272 3198 21 36 0 0 chr10 35679911 35679939 -109909349 + AT_rich Low_complexity Low_complexity 1 28 0 2692 147 12 0 chr10 35680011 35680427 -109908861 + MSTB LTR MaLR 5 425 -1 2713 169 27 4 chr10 35680731 35681251 -109908037 + L1MB3 LINE L1 5652 6183 0 984 271 80 39 chr10 35681258 35681307 -109907981 + HAL1 LINE L1 1032 1078 -1429 2053 117 3 7 chr10 35681307 35681606 -109907682 + AluSx SINE Alu 7 304 -8 984 271 80 39 chr10 35681606 35682091 -109907197 + HAL1 LINE L1 1078 1588 -919 2050 97 7 7 chr10 35682104 35682392 -109906896 - AluSp SINE Alu -25 288 1 391 320 87 0 chr10 35682634 35682806 -109906482 - HAL1 LINE L1 -710 1797 1611 520 254 21 42 chr10 35683563 35683756 -109905532 - MER5A DNA MER1_type 0 189 1 288 304 29 0 chr10 35684045 35684114 -109905174 - L2 LINE L2 -5 3308 3238 839 163 0 0 chr10 35684138 35684267 -109905021 + FLAM_A SINE Alu 1 129 -4 895 205 96 38 chr10 35684463 35684702 -109904586 + LTR65 LTR ERV1 169 421 -248 516 315 31 44 chr10 35684871 35685192 -109904096 + MER90 LTR ERV1 294 610 -4 791 251 0 43 chr10 35685238 35685445 -109903843 + MER63A DNA MER1_type 13 210 0 649 303 34 8 chr10 35686654 35686892 -109902396 + LTR33A LTR ERVL 280 523 0 193 273 91 15 chr10 35687029 35687095 -109902193 - L2 LINE L2 -247 3025 2955 363 23 0 0 chr10 35688126 35688170 -109901118 + (TC)n Simple_repeat Simple_repeat 1 44 0 22 0 0 0 chr10 35690075 35690097 -109899191 + AT_rich Low_complexity Low_complexity 1 22 0 2680 58 12 85 chr10 35690527 35690825 -109898463 + L1PB1 LINE L1 5629 5954 -197 2464 40 0 13 chr10 35690825 35691129 -109898159 + AluY SINE Alu 1 300 -11 2680 58 12 85 chr10 35691129 35691314 -109897974 + L1PB1 LINE L1 5954 6151 0 756 279 36 27 chr10 35691443 35691704 -109897584 + MIR SINE MIR 1 258 -4 2220 102 0 10 chr10 35692754 35693059 -109896229 - AluSx SINE Alu -10 302 1 291 346 94 30 chr10 35693100 35693362 -109895926 - L2 LINE L2 -245 3068 2786 455 242 101 7 chr10 35693405 35693554 -109895734 - MLT1H1 LTR MaLR -1 554 392 2018 142 0 0 chr10 35693662 35693957 -109895331 - AluSx SINE Alu -17 295 1 232 326 61 20 chr10 35694124 35694222 -109895066 - L2 LINE L2 -517 2797 2696 799 172 0 0 chr10 35694325 35694447 -109894841 - FLAM_A SINE Alu -10 123 2 182 293 121 0 chr10 35694982 35695040 -109894248 - MIR SINE MIR -150 112 48 1365 165 115 4 chr10 35695040 35695301 -109893987 - AluJo SINE Alu -16 296 7 192 161 0 0 chr10 35695303 35695334 -109893954 - MIR SINE MIR -147 61 31 2202 106 0 0 chr10 35695339 35695641 -109893647 - AluSx SINE Alu -10 302 1 192 305 107 30 chr10 35695667 35695798 -109893490 - MIR SINE MIR -26 236 96 264 185 0 0 chr10 35696024 35696078 -109893210 + GA-rich Low_complexity Low_complexity 2 55 0 1793 184 0 0 chr10 35697476 35697786 -109891502 - AluJo SINE Alu -2 310 1 440 209 0 0 chr10 35697786 35697872 -109891416 - AluJb SINE Alu -171 141 56 2184 103 0 3 chr10 35699147 35699438 -109889850 - AluSg SINE Alu -20 290 1 1615 178 3 26 chr10 35699480 35699783 -109889505 - AluJo SINE Alu -16 296 1 1991 267 66 55 chr10 35699783 35700828 -109888460 - HAL1b LINE L1 -219 1129 73 2251 86 0 57 chr10 35700926 35701241 -109888047 - AluSq SINE Alu -16 297 1 676 268 129 55 chr10 35701728 35702131 -109887157 - MLT1J LTR MaLR -17 494 62 227 235 0 92 chr10 35702153 35702251 -109887037 - L1MC4 LINE L1 -1340 6702 6614 260 300 0 0 chr10 35702275 35702365 -109886923 - L1MC4 LINE L1 -1339 6703 6614 213 121 0 0 chr10 35702365 35702398 -109886890 + (TA)n Simple_repeat Simple_repeat 1 33 0 843 176 12 35 chr10 35702399 35702569 -109886719 - FRAM SINE Alu 0 166 1 197 159 143 48 chr10 35702685 35702748 -109886540 + L2 LINE L2 3034 3102 -170 1423 161 98 42 chr10 35703191 35703477 -109885811 - AluSx SINE Alu -8 304 3 21 0 0 0 chr10 35703664 35703685 -109885603 + AT_rich Low_complexity Low_complexity 1 21 0 2857 3 0 0 chr10 35704128 35704432 -109884856 - AluYa5 SINE Alu -7 304 1 216 0 0 0 chr10 35704449 35704473 -109884815 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1143 211 13 9 chr10 35704576 35704808 -109884480 - AluJo SINE Alu -3 309 77 508 333 0 29 chr10 35704820 35705024 -109884264 - L2 LINE L2 -8 3305 3108 876 150 0 15 chr10 35705632 35705765 -109883523 + FLAM_C SINE Alu 1 131 -2 469 233 78 70 chr10 35705830 35706118 -109883170 + MLT1J2 LTR MaLR 123 449 -1 295 288 34 68 chr10 35706207 35706325 -109882963 + MIR SINE MIR 2 115 -147 22 0 0 0 chr10 35706681 35706703 -109882585 + AT_rich Low_complexity Low_complexity 1 22 0 396 186 21 41 chr10 35707909 35708006 -109881282 - MER5A DNA MER1_type -86 103 9 286 254 0 127 chr10 35708091 35708201 -109881087 + MIR SINE MIR 88 183 -79 29 47 0 0 chr10 35710168 35710211 -109879077 + AT_rich Low_complexity Low_complexity 1 43 0 208 111 67 0 chr10 35711266 35711311 -109877977 + GA-rich Low_complexity Low_complexity 2 49 0 407 264 50 14 chr10 35714013 35714094 -109875194 + MIR SINE MIR 117 207 -55 1779 164 20 3 chr10 35714094 35714392 -109874896 + AluJb SINE Alu 1 303 -9 407 264 50 14 chr10 35714392 35714450 -109874838 + MIR SINE MIR 207 261 -1 264 59 0 0 chr10 35715105 35715139 -109874149 + (CA)n Simple_repeat Simple_repeat 2 35 0 1349 176 83 47 chr10 35715325 35715626 -109873662 + AluJo SINE Alu 1 312 0 472 193 9 55 chr10 35715902 35716011 -109873277 + L2 LINE L2 3210 3313 0 2143 122 0 13 chr10 35716288 35716592 -109872696 - AluSx SINE Alu -12 300 1 25 31 0 0 chr10 35717041 35717073 -109872215 + AT_rich Low_complexity Low_complexity 1 32 0 189 0 0 0 chr10 35719134 35719155 -109870133 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 1610 157 0 53 chr10 35719168 35719449 -109869839 - AluJo SINE Alu -46 266 1 290 314 67 0 chr10 35720657 35720762 -109868526 + L2 LINE L2 3143 3254 -18 1640 111 13 114 chr10 35720871 35721187 -109868101 + AluJb SINE Alu 1 284 -28 243 0 0 0 chr10 35721187 35721214 -109868074 + (TA)n Simple_repeat Simple_repeat 1 27 0 193 268 0 0 chr10 35721226 35721267 -109868021 + L2 LINE L2 2717 2757 -557 226 315 63 27 chr10 35721771 35721882 -109867406 + L2 LINE L2 3153 3267 -5 321 118 0 0 chr10 35723041 35723092 -109866196 + (TG)n Simple_repeat Simple_repeat 2 52 0 1509 186 19 38 chr10 35723117 35723434 -109865854 - AluJo SINE Alu -1 311 1 354 232 90 32 chr10 35723782 35723937 -109865351 + L1MC5 LINE L1 7746 7909 -52 2129 135 0 3 chr10 35723973 35724277 -109865011 + AluSg SINE Alu 1 303 -7 276 281 11 11 chr10 35727096 35727185 -109862103 + GA-rich Low_complexity Low_complexity 4 92 0 25 0 0 0 chr10 35730199 35730224 -109859064 + AT_rich Low_complexity Low_complexity 1 25 0 969 118 34 56 chr10 35730224 35730402 -109858886 - L1MA8 LINE L1 -3 6288 6115 2420 95 0 19 chr10 35730402 35730718 -109858570 - AluSx SINE Alu -2 310 1 324 284 10 118 chr10 35731347 35731486 -109857802 + MER5A DNA MER1_type 8 120 -69 1585 154 6 77 chr10 35731486 35731644 -109857644 - AluJo SINE Alu -23 289 162 207 0 0 0 chr10 35731644 35731667 -109857621 + (TA)n Simple_repeat Simple_repeat 1 23 0 1585 154 6 77 chr10 35731667 35731819 -109857469 - AluJo SINE Alu -150 162 1 324 284 10 118 chr10 35731819 35731883 -109857405 + MER5A DNA MER1_type 120 189 0 2605 7 0 0 chr10 35735999 35736278 -109853010 - AluYb8 SINE Alu -1 317 39 2393 104 0 0 chr10 35737000 35737308 -109851980 - AluSq SINE Alu -5 308 1 205 257 83 73 chr10 35737359 35737468 -109851820 + L2 LINE L2 3162 3271 -1 3608 119 50 103 chr10 35737659 35738387 -109850901 - LTR8 LTR ERV1 -2 689 1 788 190 87 20 chr10 35739386 35739581 -109849707 + L1MB5 LINE L1 5959 6166 -8 1755 160 3 3 chr10 35740214 35740502 -109848786 - AluJb SINE Alu -24 288 1 829 168 0 0 chr10 35740503 35740628 -109848660 - AluJb SINE Alu -186 126 2 324 225 22 0 chr10 35740935 35741024 -109848264 - MIR SINE MIR -3 259 169 2311 121 0 0 chr10 35741176 35741483 -109847805 - AluSx SINE Alu -5 307 1 586 258 53 7 chr10 35741551 35741702 -109847586 - MIR SINE MIR -91 171 14 2068 125 0 0 chr10 35741751 35742040 -109847248 - AluSx SINE Alu -10 302 14 221 299 78 26 chr10 35742048 35742125 -109847163 - MIR3 SINE MIR -52 156 76 2631 144 57 2 chr10 35744516 35744953 -109844335 + L1MB2 LINE L1 5706 6166 -5 2058 129 3 3 chr10 35744953 35745247 -109844041 - AluSx SINE Alu -18 294 1 229 266 101 13 chr10 35746444 35746523 -109842765 - L2 LINE L2 -204 3068 2983 1353 139 12 141 chr10 35746942 35747319 -109841969 + L1MB3 LINE L1 5857 6183 0 188 261 43 0 chr10 35748041 35748087 -109841201 + L2 LINE L2 2713 2760 -554 2464 58 10 0 chr10 35748402 35748710 -109840578 - AluY SINE Alu 0 311 1 1693 164 41 7 chr10 35748726 35749018 -109840270 - AluJo SINE Alu -10 302 1 252 311 57 8 chr10 35749065 35749187 -109840101 + L2 LINE L2 3185 3312 -1 1013 144 16 57 chr10 35749850 35750044 -109839244 + MER53 DNA DNA 3 188 -1 2403 92 0 22 chr10 35750604 35750921 -109838367 - AluY SINE Alu -1 310 1 275 345 115 0 chr10 35751135 35751248 -109838040 - L2 LINE L2 -1 3271 3146 215 309 152 31 chr10 35751444 35751635 -109837653 - MIR SINE MIR -12 250 37 2252 108 0 16 chr10 35752890 35753206 -109836082 + AluSx SINE Alu 1 311 -1 1460 179 79 10 chr10 35753225 35753516 -109835772 + AluJo SINE Alu 1 311 -1 355 282 114 23 chr10 35753527 35753658 -109835630 - L2 LINE L2 -2 3311 3169 * 512 285 41 27 chr10 35753654 35753875 -109835413 - MIR SINE MIR -21 241 18 1808 120 0 15 chr10 35754775 35755075 -109834213 - AluSx SINE Alu 0 322 27 1755 163 0 24 chr10 35755615 35755904 -109833384 + AluJo SINE Alu 1 282 -30 1946 123 18 3 chr10 35756830 35757114 -109832174 - L1PA11 LINE L1 0 6174 5887 2781 118 106 34 chr10 35758756 35759335 -109829953 + MER4B LTR ERV1 1 779 0 390 300 0 0 chr10 35760112 35760202 -109829086 + MIR3 SINE MIR 111 200 -8 21 82 0 0 chr10 35760331 35760380 -109828908 + AT_rich Low_complexity Low_complexity 1 49 0 879 152 0 26 chr10 35760501 35760693 -109828595 + AluSg/x SINE Alu 134 321 0 25 83 0 0 chr10 35761100 35761160 -109828128 + AT_rich Low_complexity Low_complexity 1 60 0 794 185 32 37 chr10 35761315 35761504 -109827784 + MER53 DNA DNA 2 189 0 1425 201 60 104 chr10 35762591 35762874 -109826414 + MER34 LTR ERV1 1 248 -294 384 22 0 0 chr10 35762874 35762919 -109826369 + (TG)n Simple_repeat Simple_repeat 2 46 0 1425 201 60 104 chr10 35762919 35763202 -109826086 + MER34 LTR ERV1 248 542 0 2249 108 3 16 chr10 35764909 35765224 -109824064 - AluSx SINE Alu -1 311 1 430 316 82 37 chr10 35766402 35766646 -109822642 - MIR SINE MIR -2 260 6 183 354 0 0 chr10 35769107 35769155 -109820133 - L2 LINE L2 -15 3257 3210 * 209 304 183 35 chr10 35769126 35769241 -109820047 - MIR SINE MIR -28 234 103 300 111 0 0 chr10 35769749 35769794 -109819494 + (CA)n Simple_repeat Simple_repeat 2 46 0 1622 149 100 0 chr10 35769847 35770128 -109819160 - AluSx SINE Alu -3 309 1 180 158 0 0 chr10 35770209 35770247 -109819041 + (CA)n Simple_repeat Simple_repeat 2 39 0 262 360 81 12 chr10 35770913 35771074 -109818214 + MIR SINE MIR 8 179 -83 285 29 0 0 chr10 35771182 35771216 -109818072 + (TG)n Simple_repeat Simple_repeat 1 34 0 2086 124 10 0 chr10 35771285 35771576 -109817712 + AluJb SINE Alu 1 294 -18 248 222 0 0 chr10 35771615 35771660 -109817628 + L2 LINE L2 3220 3264 -8 192 40 0 0 chr10 35772466 35772491 -109816797 + (CA)n Simple_repeat Simple_repeat 1 25 0 189 0 0 0 chr10 35773919 35773940 -109815348 + (TGG)n Simple_repeat Simple_repeat 3 23 0 216 333 0 13 chr10 35775656 35775734 -109813554 - L3 LINE CR1 -1 1576 1500 227 186 23 0 chr10 35776159 35776202 -109813086 + GA-rich Low_complexity Low_complexity 4 47 0 288 0 0 0 chr10 35776210 35776242 -109813046 + (TG)n Simple_repeat Simple_repeat 1 32 0 789 263 9 31 chr10 35777509 35777733 -109811555 + MER20 DNA MER1_type 1 219 0 356 308 133 14 chr10 35777907 35778050 -109811238 + MIR3 SINE MIR 28 187 -21 243 0 0 0 chr10 35778860 35778887 -109810401 + (CA)n Simple_repeat Simple_repeat 2 28 0 293 268 73 49 chr10 35780157 35780280 -109809008 + MIR SINE MIR 87 212 -50 2246 99 0 7 chr10 35780282 35780575 -109808713 + AluSx SINE Alu 1 291 -21 216 0 0 0 chr10 35781361 35781385 -109807903 + (T)n Simple_repeat Simple_repeat 1 24 0 418 279 117 11 chr10 35782904 35783083 -109806205 + MIR SINE MIR 34 231 -31 598 279 77 31 chr10 35783136 35783294 -109805994 + MLT1I LTR MaLR 37 186 -223 1983 116 54 85 chr10 35783294 35783681 -109805607 + THE1C LTR MaLR 1 375 0 598 279 77 31 chr10 35783681 35783809 -109805479 + MLT1I LTR MaLR 186 336 -73 3929 146 101 17 chr10 35784161 35784885 -109804403 + LTR1 LTR ERV1 1 785 0 28 48 0 0 chr10 35786824 35786866 -109802422 + AT_rich Low_complexity Low_complexity 1 42 0 1658 192 13 0 chr10 35787719 35788027 -109801261 - AluJo SINE Alu 0 312 1 2038 110 45 3 chr10 35789631 35789921 -109799367 + AluSx SINE Alu 1 302 -10 1708 167 0 32 chr10 35792129 35792440 -109796848 - AluJo SINE Alu -11 301 1 234 0 0 0 chr10 35793262 35793288 -109796000 + (A)n Simple_repeat Simple_repeat 1 26 0 2057 136 3 3 chr10 35794010 35794312 -109794976 - AluSx SINE Alu -10 302 1 785 215 32 148 chr10 35794603 35794697 -109794591 + L2 LINE L2 2960 3063 -250 2356 99 0 0 chr10 35794697 35794999 -109794289 + AluSq SINE Alu 1 302 -11 785 215 32 148 chr10 35794999 35795304 -109793984 + L2 LINE L2 3063 3313 0 299 255 47 19 chr10 35795482 35795588 -109793700 + MIR3 SINE MIR 98 206 -2 398 302 104 16 chr10 35795601 35795783 -109793505 + MIR3 SINE MIR 8 205 -3 2108 88 0 31 chr10 35797099 35797432 -109791856 + AluSx SINE Alu 1 324 0 414 297 32 60 chr10 35798588 35798773 -109790515 + MIR3 SINE MIR 24 203 -5 2869 100 12 21 chr10 35798913 35799108 -109790180 + MSTA LTR MaLR 1 196 -232 1881 62 0 0 chr10 35799108 35799334 -109789954 + AluY SINE Alu 82 307 -4 2869 100 12 21 chr10 35799334 35799559 -109789729 + MSTA LTR MaLR 196 417 -11 911 156 24 30 chr10 35801149 35801316 -109787972 - AluJo SINE Alu -26 286 121 3736 143 8 4 chr10 35801420 35801943 -109787345 + MER1A DNA MER1_type 3 527 0 2210 121 0 0 chr10 35802171 35802469 -109786819 - AluSx SINE Alu -14 298 1 400 84 14 28 chr10 35804331 35804402 -109784886 + (GGA)n Simple_repeat Simple_repeat 3 72 0 706 186 192 55 chr10 35807103 35807143 -109782145 + L1ME4a LINE L1 5789 5822 -299 2095 108 0 26 chr10 35807143 35807448 -109781840 + AluY SINE Alu 15 311 0 1505 158 34 67 chr10 35807458 35807755 -109781533 + AluJo SINE Alu 1 287 -25 191 61 30 0 chr10 35807758 35807791 -109781497 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 706 186 192 55 chr10 35807791 35808026 -109781262 + L1ME4a LINE L1 5830 6119 -2 200 255 0 20 chr10 35808314 35808365 -109780923 - MIR SINE MIR -57 205 156 1363 137 4 57 chr10 35808727 35808975 -109780313 + AluJo SINE Alu 76 310 -2 222 118 0 0 chr10 35809694 35809728 -109779560 + (TTCA)n Simple_repeat Simple_repeat 4 37 0 2516 213 93 5 chr10 35810995 35811563 -109777725 - MLT1E3 LTR MaLR -5 619 2 1860 144 42 0 chr10 35812543 35812827 -109776461 + AluJb SINE Alu 4 299 -13 223 163 0 0 chr10 35814726 35814769 -109774519 + CT-rich Low_complexity Low_complexity 2 44 0 258 343 64 64 chr10 35815740 35816023 -109773265 + L2 LINE L2 2828 3110 -162 192 229 181 24 chr10 35816128 35816211 -109773077 + L2 LINE L2 3214 3309 -4 1464 193 36 11 chr10 35817347 35817627 -109771661 + AluJo SINE Alu 2 288 -24 512 211 6 25 chr10 35817629 35817790 -109771498 + GA-rich Low_complexity Low_complexity 3 160 0 300 309 87 7 chr10 35818008 35818157 -109771131 + MIR3 SINE MIR 48 208 0 553 118 24 0 chr10 35818214 35818299 -109770989 - L1MA3 LINE L1 -1 6304 6218 27 0 0 0 chr10 35819547 35819574 -109769714 + AT_rich Low_complexity Low_complexity 1 27 0 429 197 0 134 chr10 35820109 35820251 -109769037 - L2 LINE L2 0 3313 3191 2399 96 0 0 chr10 35821174 35821476 -109767812 + AluSx SINE Alu 1 302 -10 2561 37 0 7 chr10 35821476 35821774 -109767514 + AluY SINE Alu 1 296 -15 266 310 152 0 chr10 35822436 35822607 -109766681 + MER117 DNA MER1_type 1 197 0 33 43 0 0 chr10 35822635 35822682 -109766606 + AT_rich Low_complexity Low_complexity 1 47 0 21 0 0 0 chr10 35822852 35822873 -109766415 + AT_rich Low_complexity Low_complexity 1 21 0 2083 128 0 7 chr10 35822936 35823232 -109766056 + AluSx SINE Alu 1 294 -18 242 56 28 0 chr10 35823315 35823351 -109765937 + (TA)n Simple_repeat Simple_repeat 1 37 0 3815 138 14 4 chr10 35823352 35823912 -109765376 - L1PA15 LINE L1 -13 6152 5587 525 269 26 52 chr10 35823965 35824158 -109765130 - L1ME LINE L1 -371 5750 5563 1230 225 9 0 chr10 35824263 35824485 -109764803 - MER58A DNA MER1_type 0 224 1 279 0 0 0 chr10 35825338 35825369 -109763919 + (CA)n Simple_repeat Simple_repeat 1 31 0 2340 94 7 0 chr10 35825660 35825959 -109763329 + AluSg SINE Alu 1 301 -9 181 317 37 73 chr10 35826087 35826169 -109763119 - MIR3 SINE MIR -52 156 78 273 261 0 15 chr10 35826325 35826390 -109762898 + L3 LINE CR1 1283 1346 -231 241 312 13 13 chr10 35826877 35826954 -109762334 + L3 LINE CR1 1414 1490 -87 219 358 41 41 chr10 35827817 35827940 -109761348 - L2 LINE L2 -27 3245 3123 189 175 0 0 chr10 35829687 35829727 -109759561 + CT-rich Low_complexity Low_complexity 2 41 0 1849 101 186 80 chr10 35830711 35831076 -109758212 - MER4A LTR ERV1 0 664 261 622 91 10 20 chr10 35831076 35831175 -109758113 - MER4A LTR ERV1 -566 98 1 1796 148 0 24 chr10 35831926 35832224 -109757064 - AluJo SINE Alu -17 295 5 490 276 112 30 chr10 35832547 35832779 -109756509 + MIR SINE MIR 7 257 -5 339 316 101 0 chr10 35832940 35833079 -109756209 - MIR SINE MIR -74 188 36 2278 112 0 3 chr10 35834017 35834321 -109754967 - AluSx SINE Alu -9 303 1 1771 132 0 0 chr10 35834735 35834978 -109754310 - AluSx SINE Alu -69 243 1 1811 170 3 3 chr10 35836005 35836299 -109752989 - AluJo SINE Alu -18 294 1 449 195 23 0 chr10 35836872 35836959 -109752329 - MIR3 SINE MIR -31 177 89 2313 83 7 3 chr10 35837089 35837389 -109751899 - AluSp SINE Alu -12 301 1 291 383 0 21 chr10 35838101 35838242 -109751046 + MIR3 SINE MIR 41 178 -30 196 308 17 108 chr10 35838646 35838726 -109750562 + L3b LINE CR1 1374 1441 -142 2235 99 7 0 chr10 35838726 35839010 -109750278 - AluSx SINE Alu -17 295 10 196 308 17 108 chr10 35839010 35839049 -109750239 + L3b LINE CR1 1441 1482 -101 278 262 43 116 chr10 35839482 35839529 -109749759 + MIR3 SINE MIR 34 83 -125 1802 176 26 0 chr10 35839529 35839831 -109749457 + AluJb SINE Alu 1 310 -2 278 262 43 116 chr10 35839831 35839947 -109749341 + MIR3 SINE MIR 83 185 -23 23 0 0 0 chr10 35841353 35841376 -109747912 + AT_rich Low_complexity Low_complexity 1 23 0 2018 156 6 3 chr10 35843123 35843438 -109745850 + 7SLRNA srpRNA srpRNA 1 316 -4 21 0 0 0 chr10 35844693 35844714 -109744574 + AT_rich Low_complexity Low_complexity 1 21 0 1741 122 37 24 chr10 35845840 35846168 -109743120 - AluSx SINE Alu 0 312 1 192 356 44 0 chr10 35846314 35846404 -109742884 + MIR SINE MIR 50 143 -65 396 226 83 15 chr10 35846891 35847024 -109742264 + MER103 DNA DNA 8 149 -17 2116 132 0 3 chr10 35848684 35848979 -109740309 + AluSg SINE Alu 4 297 -13 363 277 68 27 chr10 35849949 35850097 -109739191 - MIR SINE MIR -50 212 59 2375 96 3 0 chr10 35850375 35850678 -109738610 + AluSx SINE Alu 1 304 -8 266 159 14 43 chr10 35850732 35850801 -109738487 + L1ME LINE L1 5184 5250 -896 587 213 99 50 chr10 35850863 35851084 -109738204 + L1ME LINE L1 5261 5492 -670 21 0 0 0 chr10 35851452 35851473 -109737815 + AT_rich Low_complexity Low_complexity 1 21 0 973 106 0 0 chr10 35851530 35851662 -109737626 + AluSc SINE Alu 165 296 -13 2088 121 7 3 chr10 35852320 35852617 -109736671 - AluSg SINE Alu -12 298 1 1575 175 9 47 chr10 35853695 35854015 -109735273 - AluJo SINE Alu -4 308 1 663 164 18 18 chr10 35854422 35854532 -109734756 + FLAM_C SINE Alu 2 111 -32 25 51 0 0 chr10 35854546 35854585 -109734703 + AT_rich Low_complexity Low_complexity 1 39 0 1949 94 38 17 chr10 35855977 35856265 -109733023 - AluSq SINE Alu -19 294 1 257 233 0 0 chr10 35856275 35856335 -109732953 - L1ME3A LINE L1 -201 5969 5910 * 541 289 75 16 chr10 35856334 35856521 -109732767 + L1ME3A LINE L1 5963 6160 -10 535 154 100 9 chr10 35856641 35856751 -109732537 - MER96B DNA MER1_type? -23 394 275 461 181 123 26 chr10 35856642 35856797 -109732491 + MER96B DNA MER1_type? 25 194 -223 * 27 62 0 0 chr10 35858262 35858310 -109730978 + AT_rich Low_complexity Low_complexity 1 48 0 1041 233 0 23 chr10 35859950 35860165 -109729123 - MER63A DNA MER1_type 0 210 1 189 107 0 0 chr10 35861730 35861758 -109727530 + (A)n Simple_repeat Simple_repeat 1 28 0 198 0 0 0 chr10 35864213 35864235 -109725053 + (TG)n Simple_repeat Simple_repeat 2 23 0 225 0 0 0 chr10 35866004 35866029 -109723259 + (A)n Simple_repeat Simple_repeat 1 25 0 306 314 44 74 chr10 35866498 35866727 -109722561 + L1M2 LINE L1 1030 1251 -5598 32 26 0 0 chr10 35870175 35870214 -109719074 + AT_rich Low_complexity Low_complexity 1 39 0 1425 338 95 38 chr10 35870289 35871586 -109717702 - L2 LINE L2 -618 2696 1326 496 293 93 18 chr10 35873502 35873727 -109715561 - MLT1K LTR MaLR -15 573 332 2526 171 20 34 chr10 35874090 35874530 -109714758 - Tigger2a DNA MER2_type 0 434 1 209 157 0 39 chr10 35874544 35874595 -109714693 + T-rich Low_complexity Low_complexity 2 50 0 2084 128 3 3 chr10 35874717 35875014 -109714274 - AluSx SINE Alu -15 297 1 21 0 0 0 chr10 35875638 35875659 -109713629 + AT_rich Low_complexity Low_complexity 1 21 0 239 322 99 47 chr10 35875732 35875800 -109713488 + MIR3 SINE MIR 23 86 -122 4622 171 52 40 chr10 35875800 35876691 -109712597 + MER54A LTR ERVL 1 901 0 239 322 99 47 chr10 35876691 35876793 -109712495 + MIR3 SINE MIR 86 202 -6 1854 119 0 4 chr10 35879669 35879920 -109709368 + AluSc SINE Alu 46 295 -14 526 290 97 6 chr10 35881296 35881472 -109707816 + MIR SINE MIR 46 237 -25 207 322 67 0 chr10 35881684 35881774 -109707514 - L3 LINE CR1 -505 1072 977 203 327 0 0 chr10 35882049 35882101 -109707187 + (TG)n Simple_repeat Simple_repeat 2 53 0 388 348 50 50 chr10 35882255 35882514 -109706774 + L2 LINE L2 2990 3248 -24 298 351 40 0 chr10 35882629 35882777 -109706511 - MIR SINE MIR -6 256 103 23 0 0 0 chr10 35883360 35883383 -109705905 + AT_rich Low_complexity Low_complexity 1 23 0 726 291 36 8 chr10 35884326 35884577 -109704711 + MER46C DNA MER2_type 80 337 -1 2425 313 149 36 chr10 35884615 35885387 -109703901 + L2 LINE L2 839 1523 -1790 1565 188 20 14 chr10 35885387 35885680 -109703608 + AluJo SINE Alu 1 295 -17 2425 313 149 36 chr10 35885680 35886878 -109702410 + L2 LINE L2 1523 3039 -274 236 340 7 49 chr10 35886977 35887121 -109702167 + L2 LINE L2 2550 2687 -627 2261 103 3 0 chr10 35887165 35887467 -109701821 - AluSc SINE Alu -6 303 1 303 300 8 33 chr10 35887601 35887721 -109701567 + L2 LINE L2 2938 3054 -218 696 246 126 15 chr10 35887878 35888077 -109701211 + MIR SINE MIR 29 249 -13 2318 123 13 58 chr10 35888376 35888609 -109700679 + THE1B LTR MaLR 1 212 -152 1947 117 41 14 chr10 35888609 35888899 -109700389 - AluSx SINE Alu -13 299 2 2318 123 13 58 chr10 35888899 35889046 -109700242 + THE1B LTR MaLR 212 364 0 849 203 79 11 chr10 35889308 35889485 -109699803 + MER5A DNA MER1_type 1 189 0 212 59 29 0 chr10 35889702 35889736 -109699552 + (TTG)n Simple_repeat Simple_repeat 2 36 0 1231 191 0 9 chr10 35889744 35889964 -109699324 - AluJb SINE Alu -24 288 71 2768 86 31 17 chr10 35890810 35891169 -109698119 - THE1B LTR MaLR 0 364 1 201 324 54 9 chr10 35891437 35891548 -109697740 + L2 LINE L2 1552 1667 -1647 1204 207 93 77 chr10 35891586 35891852 -109697436 - MLT1B LTR MaLR -7 383 108 2018 136 7 0 chr10 35891852 35892147 -109697141 - AluSx SINE Alu -14 298 2 1204 207 93 77 chr10 35892147 35892257 -109697031 - MLT1B LTR MaLR -282 108 1 1129 219 22 48 chr10 35892332 35892647 -109696641 - MLT1A1 LTR MaLR 0 365 59 22 0 0 0 chr10 35893190 35893212 -109696076 + AT_rich Low_complexity Low_complexity 1 22 0 2771 127 39 10 chr10 35893232 35893648 -109695640 + MSTA LTR MaLR 1 428 0 191 114 29 0 chr10 35893851 35893886 -109695402 + GA-rich Low_complexity Low_complexity 5 40 0 21 36 0 0 chr10 35894025 35894053 -109695235 + AT_rich Low_complexity Low_complexity 1 28 0 189 74 0 0 chr10 35894594 35894621 -109694667 + (TC)n Simple_repeat Simple_repeat 2 28 0 225 333 14 0 chr10 35895556 35895625 -109693663 + MIR SINE MIR 83 152 -56 544 296 143 12 chr10 35895883 35896289 -109692999 - L1MC4a LINE L1 -1805 6003 5545 495 226 189 47 chr10 35896487 35896846 -109692442 + MLT1J1 LTR MaLR 18 427 -19 200 347 121 16 chr10 35896867 35897057 -109692231 + L2 LINE L2 2587 2796 -518 3675 115 46 3 chr10 35897207 35897774 -109691514 + LTR26 LTR ERV1 13 603 0 384 289 47 34 chr10 35897986 35898135 -109691153 - MIR3 SINE MIR -12 196 46 252 271 71 35 chr10 35899242 35899327 -109689961 - L2 LINE L2 -50 3263 3176 186 71 0 0 chr10 35899527 35899555 -109689733 + (GGCTG)n Simple_repeat Simple_repeat 3 30 0 1317 247 157 13 chr10 35899772 35900422 -109688866 - L2 LINE L2 -172 3141 2411 209 370 87 0 chr10 35900509 35900601 -109688687 - MIR3 SINE MIR -11 197 98 2201 91 0 0 chr10 35900621 35900895 -109688393 + AluY SINE Alu 23 296 -15 1253 197 30 0 chr10 35900901 35901135 -109688153 - MSTB LTR MaLR -2 424 184 1768 128 77 36 chr10 35901303 35901640 -109687648 - THE1C LTR MaLR 0 375 25 453 56 0 0 chr10 35901641 35901695 -109687593 - THE1C LTR MaLR -317 58 5 1511 187 124 38 chr10 35901742 35902138 -109687150 - MSTB1 LTR MaLR 0 432 3 241 239 70 14 chr10 35902714 35902785 -109686503 - MIR SINE MIR -1 261 187 250 341 11 11 chr10 35902843 35902931 -109686357 + MIR SINE MIR 60 147 -115 2062 141 3 3 chr10 35903149 35903454 -109685834 - AluSq SINE Alu -8 305 1 2497 127 82 20 chr10 35903674 35904077 -109685211 - MSTC LTR MaLR 0 428 1 2036 116 18 0 chr10 35904311 35904595 -109684693 - AluSg SINE Alu -9 301 13 1799 158 41 7 chr10 35905064 35905380 -109683908 + AluSx SINE Alu 1 312 0 28 29 0 0 chr10 35906491 35906526 -109682762 + AT_rich Low_complexity Low_complexity 1 35 0 24 0 0 0 chr10 35906843 35906867 -109682421 + AT_rich Low_complexity Low_complexity 1 24 0 1324 156 49 0 chr10 35906941 35907166 -109682122 - MER46A DNA MER2_type 0 236 1 193 328 69 0 chr10 35907436 35907494 -109681794 + MIR SINE MIR 50 111 -151 200 270 63 72 chr10 35908072 35908183 -109681105 + MIR SINE MIR 25 134 -128 217 276 26 40 chr10 35908661 35908737 -109680551 - MIR3 SINE MIR -51 157 83 1563 159 51 24 chr10 35909117 35909412 -109679876 - AluJo SINE Alu -9 303 1 1878 111 0 4 chr10 35910049 35910310 -109678978 - AluSx SINE Alu 0 312 53 436 254 81 41 chr10 35910319 35910516 -109678772 - MIR SINE MIR -12 250 46 21 57 0 0 chr10 35910646 35910681 -109678607 + AT_rich Low_complexity Low_complexity 1 35 0 328 307 79 7 chr10 35911030 35911170 -109678118 - L2 LINE L2 -4 3309 3160 2303 141 39 36 chr10 35915580 35915943 -109673345 - THE1B LTR MaLR 0 364 1 323 376 7 7 chr10 35916366 35916515 -109672773 + MIR3 SINE MIR 57 205 -3 195 174 22 43 chr10 35916660 35916706 -109672582 - L2 LINE L2 -23 3249 3205 208 279 302 0 chr10 35917612 35917741 -109671547 + MIR3 SINE MIR 36 203 -5 2364 92 0 6 chr10 35917786 35918101 -109671187 - AluSq SINE Alu 0 313 1 2524 80 0 0 chr10 35918710 35919050 -109670238 - AluY SINE Alu 0 340 1 1616 180 14 11 chr10 35919087 35919371 -109669917 - AluJo SINE Alu -27 285 1 1418 140 162 18 chr10 35920994 35921266 -109668022 + AluJo SINE Alu 1 311 -1 364 278 71 113 chr10 35923949 35924374 -109664914 - L2 LINE L2 -7 3265 2859 1702 257 93 27 chr10 35924468 35925298 -109663990 - MER45C DNA AcHobo -13 940 2 354 322 31 35 chr10 35926060 35926212 -109663076 + MIR SINE MIR 2 150 -58 904 150 60 0 chr10 35926233 35926366 -109662922 - AluJo SINE Alu -161 151 11 1750 113 8 0 chr10 35926385 35926625 -109662663 - AluSc SINE Alu -4 305 64 874 286 136 13 chr10 35926638 35927029 -109662259 + MLT1J LTR MaLR 71 509 -2 202 260 273 0 chr10 35927370 35927447 -109661841 - L2 LINE L2 -16 3297 3200 897 267 51 0 chr10 35927466 35927702 -109661586 + MIR SINE MIR 11 258 -4 1580 252 104 9 chr10 35927702 35928163 -109661125 - MLT1H LTR MaLR 0 549 45 289 225 17 146 chr10 35928343 35928521 -109660767 - MLT1H-int LTR MaLR -206 1529 1375 378 191 67 48 chr10 35929199 35929304 -109659984 - MLT1H-int LTR MaLR -832 539 433 1428 200 70 0 chr10 35929396 35929696 -109659592 - L1MB7 LINE L1 0 6184 5864 225 289 22 22 chr10 35929818 35929908 -109659380 - MLT1H-int LTR MaLR -1645 90 1 1049 250 77 45 chr10 35929958 35930334 -109658954 - MLT1H LTR MaLR -38 511 124 207 186 0 0 chr10 35930337 35930380 -109658908 + (CA)n Simple_repeat Simple_repeat 2 44 0 1004 224 16 44 chr10 35930381 35930635 -109658653 - MLT2B1 LTR ERVL -56 464 177 730 186 83 0 chr10 35930673 35930818 -109658470 - L1MD2 LINE L1 -10 6349 6193 197 125 0 21 chr10 35930821 35930869 -109658419 + (TA)n Simple_repeat Simple_repeat 1 47 0 221 233 34 27 chr10 35930899 35931045 -109658243 + (TA)n Simple_repeat Simple_repeat 1 147 0 242 56 28 0 chr10 35931046 35931082 -109658206 + (GA)n Simple_repeat Simple_repeat 2 38 0 1653 152 16 4 chr10 35931082 35931339 -109657949 - AluJb SINE Alu -30 282 23 4078 208 32 14 chr10 35931353 35932230 -109657058 - L1MD2 LINE L1 -162 6197 5305 1927 143 11 0 chr10 35933086 35933372 -109655916 - AluSx SINE Alu -23 289 1 23 68 0 0 chr10 35933375 35933419 -109655869 + AT_rich Low_complexity Low_complexity 1 44 0 236 314 161 8 chr10 35934060 35934178 -109655110 - L2 LINE L2 -5 3308 3173 216 0 0 0 chr10 35934696 35934720 -109654568 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 1368 165 136 4 chr10 35934743 35934985 -109654303 - AluJo SINE Alu -38 274 1 270 56 0 0 chr10 35934996 35935032 -109654256 + (TG)n Simple_repeat Simple_repeat 2 37 0 180 0 0 0 chr10 35935033 35935053 -109654235 + (TA)n Simple_repeat Simple_repeat 2 21 0 443 329 40 22 chr10 35935345 35935570 -109653718 + L3 LINE CR1 1146 1374 -203 202 226 57 0 chr10 35935632 35935685 -109653603 - MIR SINE MIR -77 185 130 195 342 25 0 chr10 35935847 35935926 -109653362 + L3 LINE CR1 1467 1547 -30 2363 173 75 25 chr10 35935997 35936478 -109652810 - MLT1D LTR MaLR 0 505 1 2358 111 18 82 chr10 35938012 35938401 -109650887 + THE1B LTR MaLR 1 364 0 768 191 0 15 chr10 35938830 35938966 -109650322 - AluJo SINE Alu -177 135 2 304 300 0 46 chr10 35939760 35939890 -109649398 + L1MEc LINE L1 1228 1351 -5189 1258 196 92 0 chr10 35940045 35940295 -109648993 + AluJo SINE Alu 9 281 -31 865 18 18 0 chr10 35940298 35940409 -109648879 + (TCTA)n Simple_repeat Simple_repeat 4 116 0 263 264 58 0 chr10 35940414 35940501 -109648787 + L1MEc LINE L1 1483 1574 -4956 310 286 190 7 chr10 35940532 35940795 -109648493 + L1MEc LINE L1 1724 2055 -846 234 0 0 0 chr10 35940889 35940915 -109648373 + (T)n Simple_repeat Simple_repeat 1 26 0 23 33 0 0 chr10 35941059 35941089 -109648199 + AT_rich Low_complexity Low_complexity 1 30 0 482 263 78 44 chr10 35941293 35941613 -109647675 + L1MEc LINE L1 2571 2901 -3639 1719 189 0 7 chr10 35941648 35941950 -109647338 + AluJo SINE Alu 1 300 -12 3460 77 27 0 chr10 35942504 35942945 -109646343 - L1PA10 LINE L1 -11 6157 5705 2029 106 0 0 chr10 35942990 35943264 -109646024 + AluSq SINE Alu 39 312 -1 24 32 0 0 chr10 35944477 35944508 -109644780 + AT_rich Low_complexity Low_complexity 1 31 0 2542 87 0 0 chr10 35945309 35945621 -109643667 + AluSx SINE Alu 1 312 0 1724 162 4 0 chr10 35945938 35946204 -109643084 + AluJo SINE Alu 1 267 -45 5694 130 8 1 chr10 35946217 35947073 -109642215 + L1PA16 LINE L1 5296 6157 -9 726 69 46 0 chr10 35948210 35948341 -109640947 + (TGGA)n Simple_repeat Simple_repeat 1 137 0 2253 91 3 23 chr10 35950095 35950402 -109638886 + AluY SINE Alu 1 301 -10 1970 142 0 35 chr10 35951634 35951945 -109637343 + AluSx SINE Alu 1 300 -12 25 0 0 0 chr10 35953067 35953092 -109636196 + AT_rich Low_complexity Low_complexity 1 25 0 2017 221 71 44 chr10 35955316 35955882 -109633406 + MLT1G LTR MaLR 10 590 0 2375 96 0 0 chr10 35956552 35956854 -109632434 + AluSx SINE Alu 1 302 -10 196 28 83 0 chr10 35956931 35956967 -109632321 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 227 154 0 0 chr10 35959191 35959230 -109630058 + L2 LINE L2 3261 3299 -14 207 100 0 0 chr10 35959524 35959554 -109629734 + (CA)n Simple_repeat Simple_repeat 2 31 0 323 23 45 0 chr10 35961816 35961860 -109627428 - MADE1 DNA Mariner 0 80 35 364 278 71 113 chr10 35962409 35962834 -109626454 - L2 LINE L2 -7 3265 2859 1702 257 93 27 chr10 35962928 35963758 -109625530 - MER45C DNA AcHobo -13 940 2 354 322 31 35 chr10 35964520 35964672 -109624616 + MIR SINE MIR 2 150 -58 904 150 60 0 chr10 35964693 35964826 -109624462 - AluJo SINE Alu -161 151 11 1750 113 8 0 chr10 35964845 35965085 -109624203 - AluSc SINE Alu -4 305 64 874 286 136 13 chr10 35965098 35965489 -109623799 + MLT1J LTR MaLR 71 509 -2 202 260 273 0 chr10 35965830 35965907 -109623381 - L2 LINE L2 -16 3297 3200 897 267 51 0 chr10 35965926 35966162 -109623126 + MIR SINE MIR 11 258 -4 1580 252 104 9 chr10 35966162 35966623 -109622665 - MLT1H LTR MaLR 0 549 45 289 225 17 146 chr10 35966803 35966981 -109622307 - MLT1H-int LTR MaLR -206 1529 1375 378 191 67 48 chr10 35967659 35967764 -109621524 - MLT1H-int LTR MaLR -832 539 433 1428 200 70 0 chr10 35967856 35968156 -109621132 - L1MB7 LINE L1 0 6184 5864 225 289 22 22 chr10 35968278 35968368 -109620920 - MLT1H-int LTR MaLR -1645 90 1 1074 245 85 53 chr10 35968418 35968794 -109620494 - MLT1H LTR MaLR -38 511 124 207 186 0 0 chr10 35968797 35968840 -109620448 + (CA)n Simple_repeat Simple_repeat 2 44 0 1004 224 16 44 chr10 35968841 35969095 -109620193 - MLT2B1 LTR ERVL -56 464 177 730 186 83 0 chr10 35969133 35969278 -109620010 - L1MD2 LINE L1 -10 6349 6193 197 125 0 21 chr10 35969281 35969329 -109619959 + (TA)n Simple_repeat Simple_repeat 1 47 0 255 239 28 21 chr10 35969359 35969501 -109619787 + (TA)n Simple_repeat Simple_repeat 1 143 0 242 56 28 0 chr10 35969502 35969538 -109619750 + (GA)n Simple_repeat Simple_repeat 2 38 0 1653 152 16 4 chr10 35969538 35969795 -109619493 - AluJb SINE Alu -30 282 23 4038 214 31 10 chr10 35969809 35970684 -109618604 - L1MD2 LINE L1 -162 6197 5305 1953 140 11 0 chr10 35971540 35971826 -109617462 - AluSx SINE Alu -23 289 1 236 314 161 8 chr10 35972514 35972632 -109616656 - L2 LINE L2 -5 3308 3173 216 0 0 0 chr10 35973150 35973174 -109616114 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 1413 141 153 21 chr10 35973197 35973439 -109615849 - AluJo SINE Alu -38 274 1 263 203 16 0 chr10 35973439 35973503 -109615785 + (TA)n Simple_repeat Simple_repeat 2 66 0 443 329 40 22 chr10 35973794 35974019 -109615269 + L3 LINE CR1 1146 1374 -203 187 245 57 0 chr10 35974081 35974134 -109615154 - MIR SINE MIR -77 185 130 195 342 25 0 chr10 35974296 35974375 -109614913 + L3 LINE CR1 1467 1547 -30 2363 173 75 25 chr10 35974446 35974927 -109614361 - MLT1D LTR MaLR 0 505 1 2358 111 18 82 chr10 35976461 35976850 -109612438 + THE1B LTR MaLR 1 364 0 768 191 0 15 chr10 35977279 35977415 -109611873 - AluJo SINE Alu -177 135 2 316 292 0 46 chr10 35978209 35978339 -109610949 + L1MEc LINE L1 1228 1351 -5189 1258 196 92 0 chr10 35978494 35978744 -109610544 + AluJo SINE Alu 9 281 -31 649 23 23 0 chr10 35978747 35978834 -109610454 + (TCTA)n Simple_repeat Simple_repeat 4 92 0 263 264 58 0 chr10 35978839 35978926 -109610362 + L1MEc LINE L1 1483 1574 -4956 310 286 190 7 chr10 35978957 35979220 -109610068 + L1MEc LINE L1 1724 2055 -846 234 0 0 0 chr10 35979314 35979340 -109609948 + (T)n Simple_repeat Simple_repeat 1 26 0 23 33 0 0 chr10 35979484 35979514 -109609774 + AT_rich Low_complexity Low_complexity 1 30 0 444 269 78 44 chr10 35979718 35980038 -109609250 + L1MEc LINE L1 2571 2901 -3639 1750 185 0 7 chr10 35980073 35980375 -109608913 + AluJo SINE Alu 1 300 -12 3460 77 27 0 chr10 35980930 35981371 -109607917 - L1PA10 LINE L1 -11 6157 5705 1977 116 0 0 chr10 35981416 35981691 -109607597 + AluSq SINE Alu 39 313 0 23 33 0 0 chr10 35982900 35982930 -109606358 + AT_rich Low_complexity Low_complexity 1 30 0 2520 90 0 0 chr10 35983731 35984043 -109605245 + AluSx SINE Alu 1 312 0 1724 162 4 0 chr10 35984361 35984627 -109604661 + AluJo SINE Alu 1 267 -45 5694 130 8 1 chr10 35984640 35985496 -109603792 + L1PA16 LINE L1 5296 6157 -9 726 69 46 0 chr10 35986634 35986765 -109602523 + (TGGA)n Simple_repeat Simple_repeat 1 137 0 297 271 52 58 chr10 35988178 35988333 -109600955 + MER103 DNA DNA 4 157 -9 898 229 85 38 chr10 35988497 35988836 -109600452 + MLT1E LTR MaLR 305 593 0 264 358 91 12 chr10 35989672 35989837 -109599451 - L3b LINE CR1 -23 1560 1383 261 316 61 9 chr10 35989907 35990021 -109599267 - L3b LINE CR1 -362 1221 1102 1914 116 20 40 chr10 35990361 35990663 -109598625 + AluSc SINE Alu 1 296 -13 1141 155 120 43 chr10 35990732 35990990 -109598298 - AluJo SINE Alu -21 291 14 273 119 0 0 chr10 35991327 35991369 -109597919 + (TG)n Simple_repeat Simple_repeat 2 43 0 334 0 43 0 chr10 35991636 35991682 -109597606 + (TG)n Simple_repeat Simple_repeat 2 49 0 1711 289 119 40 chr10 35992630 35993669 -109595619 + L2 LINE L2 1734 2855 -459 251 269 0 15 chr10 35993774 35993841 -109595447 + MLT1I LTR MaLR 344 409 0 326 313 50 55 chr10 35993856 35994038 -109595250 - L2 LINE L2 0 3313 3133 696 237 178 39 chr10 35994736 35995146 -109594142 - L1ME3A LINE L1 -49 6121 5655 368 274 17 46 chr10 35995194 35995368 -109593920 - L1ME3A LINE L1 -676 5486 5318 278 308 30 56 chr10 35995397 35995595 -109593693 + HAL1 LINE L1 1482 1674 -833 468 294 102 29 chr10 35995837 35996326 -109592962 + L1M4 LINE L1 4426 4950 -1196 956 179 0 22 chr10 35996435 35996614 -109592674 - FRAM SINE Alu -8 168 1 1710 165 10 10 chr10 35996620 35997083 -109592205 - AluJo SINE Alu 0 312 1 364 339 46 0 chr10 35997088 35997218 -109592070 - L2 LINE L2 -541 2773 2638 903 253 99 92 chr10 35997235 35997736 -109591552 + HAL1b LINE L1 392 888 -460 2226 107 0 7 chr10 35997736 35998044 -109591244 + AluSc SINE Alu 1 306 -3 903 253 99 92 chr10 35998044 35998063 -109591225 + HAL1b LINE L1 888 905 -443 2367 103 0 0 chr10 35998063 35998375 -109590913 + AluSq SINE Alu 1 312 -1 903 253 99 92 chr10 35998375 35998568 -109590720 + HAL1b LINE L1 905 1111 -237 234 233 44 56 chr10 35998596 35998686 -109590602 - L1MC4 LINE L1 -1340 6702 6614 260 247 39 0 chr10 35998883 35998960 -109590328 + MIR SINE MIR 175 254 -8 1398 213 68 55 chr10 35999322 35999707 -109589581 - MLT1B LTR MaLR 0 390 1 1775 145 7 36 chr10 35999774 36000077 -109589211 - AluJo SINE Alu -18 294 1 2089 146 0 0 chr10 36000083 36000384 -109588904 - AluSq SINE Alu -12 301 1 2064 124 0 7 chr10 36000883 36001174 -109588114 + AluSx SINE Alu 1 289 -23 21 57 0 0 chr10 36001733 36001768 -109587520 + AT_rich Low_complexity Low_complexity 1 35 0 259 216 27 0 chr10 36003099 36003173 -109586115 + (TA)n Simple_repeat Simple_repeat 1 76 0 34 79 0 0 chr10 36003230 36003306 -109585982 + AT_rich Low_complexity Low_complexity 1 76 0 389 310 56 21 chr10 36004648 36004790 -109584498 - MIR3 SINE MIR -61 147 1 2183 133 0 3 chr10 36004937 36005246 -109584042 + AluSx SINE Alu 1 308 -4 211 263 35 0 chr10 36005376 36005433 -109583855 + (CATATA)n Simple_repeat Simple_repeat 1 59 0 243 0 0 0 chr10 36006892 36006919 -109582369 + (T)n Simple_repeat Simple_repeat 1 27 0 225 162 44 0 chr10 36007702 36007770 -109581518 + (TA)n Simple_repeat Simple_repeat 1 71 0 952 199 256 59 chr10 36008652 36008709 -109580579 + L1MEc LINE L1 37 81 -6315 2014 189 25 17 chr10 36008709 36009069 -109580219 - MLT1A1 LTR MaLR 0 365 3 952 199 256 59 chr10 36009069 36009275 -109580013 + L1MEc LINE L1 81 245 -6151 285 29 0 0 chr10 36009275 36009309 -109579979 + (GA)n Simple_repeat Simple_repeat 1 34 0 952 199 256 59 chr10 36009309 36009435 -109579853 + L1MEc LINE L1 245 504 -5892 828 222 41 110 chr10 36009425 36009844 -109579444 + L1MEc LINE L1 2113 2502 -3894 * 765 237 12 0 chr10 36009844 36010017 -109579271 + L1MEc LINE L1 2764 2938 -3277 * 1497 235 48 83 chr10 36010011 36010610 -109578678 + L1MEc LINE L1 3524 4101 -2114 1214 339 121 36 chr10 36012513 36013017 -109576271 - L2 LINE L2 -72 3200 2740 1735 162 10 10 chr10 36013017 36013307 -109575981 + AluJo SINE Alu 1 290 -22 1214 339 121 36 chr10 36013307 36014175 -109575113 - L2 LINE L2 -532 2740 1720 470 162 5 49 chr10 36014924 36015109 -109574179 + (TG)n Simple_repeat Simple_repeat 2 178 0 260 210 25 49 chr10 36015111 36015192 -109574096 + (TATATG)n Simple_repeat Simple_repeat 3 81 0 557 135 13 46 chr10 36015192 36015433 -109573855 + (TG)n Simple_repeat Simple_repeat 1 232 0 584 175 33 109 chr10 36015988 36016171 -109573117 - L1M4 LINE L1 -3361 2785 2617 300 260 121 56 chr10 36016231 36016407 -109572881 - L1ME LINE L1 -294 5827 5631 1971 164 91 30 chr10 36016407 36016576 -109572712 + MSTD LTR MaLR 1 158 -238 1863 164 0 28 chr10 36016576 36016893 -109572395 + AluJo SINE Alu 1 308 -4 1971 164 91 30 chr10 36016893 36017096 -109572192 + MSTD LTR MaLR 158 396 0 300 260 121 56 chr10 36017096 36017150 -109572138 - L1ME LINE L1 -490 5631 5582 26 0 0 0 chr10 36018464 36018490 -109570798 + AT_rich Low_complexity Low_complexity 1 26 0 1637 180 31 10 chr10 36018994 36019283 -109570005 + AluJo SINE Alu 5 299 -13 544 235 67 0 chr10 36020718 36020867 -109568421 - MER103 DNA DNA -7 159 1 42 0 0 0 chr10 36021310 36021352 -109567936 + AT_rich Low_complexity Low_complexity 1 42 0 1761 130 20 4 chr10 36021356 36021610 -109567678 - AluSx SINE Alu -54 258 1 28 29 0 0 chr10 36021720 36021755 -109567533 + AT_rich Low_complexity Low_complexity 1 35 0 389 311 91 36 chr10 36021773 36021992 -109567296 - MIR SINE MIR -3 259 29 183 42 0 0 chr10 36022454 36022478 -109566810 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 323 277 0 24 chr10 36023113 36023196 -109566092 + MIR SINE MIR 18 98 -110 241 313 31 0 chr10 36024204 36024268 -109565020 + L2 LINE L2 3201 3266 -6 586 257 119 15 chr10 36025329 36025531 -109563757 - L2 LINE L2 0 3313 3091 2877 157 13 23 chr10 36025563 36026173 -109563115 + pTR5 LTR ERV1 742 1345 -1093 4103 132 22 136 chr10 36026188 36027116 -109562172 + LTR12 LTR ERV1 5 826 0 2198 96 3 3 chr10 36027292 36027585 -109561703 - AluY SINE Alu -18 293 1 412 310 67 28 chr10 36027738 36027914 -109561374 - L2 LINE L2 -448 2866 2675 2110 141 0 0 chr10 36027914 36028213 -109561075 + AluJo SINE Alu 1 299 -13 412 310 67 28 chr10 36028213 36028291 -109560997 - L2 LINE L2 -639 2675 2602 195 217 22 0 chr10 36029067 36029113 -109560175 - MIR SINE MIR -109 153 107 301 284 0 49 chr10 36029363 36029465 -109559823 + (CA)n Simple_repeat Simple_repeat 1 97 0 3278 128 63 9 chr10 36029515 36030054 -109559234 - L1MA2 LINE L1 0 6304 5737 321 328 55 8 chr10 36030144 36030272 -109559016 + L3b LINE CR1 1162 1295 -288 526 285 43 48 chr10 36031652 36031859 -109557429 - MIR SINE MIR -51 211 6 22 0 0 0 chr10 36032170 36032192 -109557096 + AT_rich Low_complexity Low_complexity 1 22 0 225 98 0 98 chr10 36032342 36032383 -109556905 - U2 snRNA snRNA -150 38 2 410 304 44 44 chr10 36033604 36033785 -109555503 - MIR SINE MIR -51 211 31 2539 39 7 13 chr10 36033790 36034099 -109555189 - AluY SINE Alu -4 307 1 756 175 133 0 chr10 36034101 36034244 -109555044 - FRAM SINE Alu -15 161 1 2515 57 0 0 chr10 36034256 36034553 -109554735 - AluY SINE Alu -14 297 1 519 56 127 0 chr10 36035391 36035462 -109553826 + MADE1 DNA Mariner 1 80 0 1890 136 44 0 chr10 36036945 36037218 -109552070 - AluSx SINE Alu -27 285 1 4552 119 116 132 chr10 36037461 36038745 -109550543 - pTR5 LTR ERV1 -143 2295 741 604 134 62 18 chr10 36038965 36039077 -109550211 + THE1C LTR MaLR 1 117 -258 1054 116 0 17 chr10 36039670 36039851 -109549437 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 1662 184 0 4 chr10 36039856 36040133 -109549155 - AluJo SINE Alu -36 276 1 2271 121 3 0 chr10 36043598 36043904 -109545384 + AluSq SINE Alu 1 307 -6 252 314 58 76 chr10 36045052 36045224 -109544064 - L2 LINE L2 -179 3093 2925 283 274 48 12 chr10 36045331 36045415 -109543873 - L2 LINE L2 -45 3268 3182 2237 92 0 41 chr10 36045481 36045798 -109543490 + AluSg SINE Alu 1 304 -6 534 277 82 48 chr10 36045935 36046166 -109543122 - MIR SINE MIR -10 252 14 234 250 0 18 chr10 36046176 36046232 -109543056 + MER5B DNA MER1_type 72 126 -52 778 200 0 22 chr10 36046245 36046380 -109542908 - FLAM_C SINE Alu 0 133 2 264 127 0 0 chr10 36046387 36046442 -109542846 + (TTTAG)n Simple_repeat Simple_repeat 1 55 0 1926 157 0 0 chr10 36046442 36046728 -109542560 - AluJb SINE Alu -26 286 1 2567 61 0 10 chr10 36048553 36048866 -109540422 + AluY SINE Alu 1 310 -1 271 322 73 41 chr10 36049330 36049459 -109539829 + MIR SINE MIR 9 132 -130 2160 110 0 0 chr10 36049459 36049740 -109539548 + AluSx SINE Alu 23 303 -9 271 322 73 41 chr10 36049740 36049855 -109539433 + MIR SINE MIR 132 261 -1 2118 153 46 100 chr10 36053337 36053408 -109535880 - Tigger2a DNA MER2_type -2274 434 361 1771 171 3 10 chr10 36053408 36053706 -109535582 - AluSx SINE Alu -16 296 1 2118 153 46 100 chr10 36053706 36054093 -109535195 - Tigger2a DNA MER2_type -2347 361 1 264 341 0 0 chr10 36054348 36054436 -109534852 - MIR SINE MIR -2 260 173 * 271 303 8 42 chr10 36054435 36054554 -109534734 + MIR SINE MIR 23 137 -71 220 341 14 29 chr10 36054679 36054817 -109534471 - L3b LINE CR1 -346 1237 1102 1609 226 45 59 chr10 36059116 36059323 -109529965 + MLT1D LTR MaLR 1 209 -296 1298 171 140 8 chr10 36059323 36059580 -109529708 + AluSg1 SINE Alu 1 291 -18 1609 226 45 59 chr10 36059580 36059880 -109529408 + MLT1D LTR MaLR 209 501 -4 15356 137 16 7 chr10 36060751 36063142 -109526146 - Tigger1 DNA MER2_type -5 2413 1 2634 228 88 50 chr10 36063217 36064014 -109525274 - MER21B LTR ERV1 -36 827 1 599 239 77 43 chr10 36064612 36064846 -109524442 - MIR SINE MIR 0 262 21 2113 105 6 53 chr10 36065294 36065617 -109523671 - AluSx SINE Alu -4 308 1 222 228 18 18 chr10 36065655 36065712 -109523576 + CT-rich Low_complexity Low_complexity 4 60 0 1731 179 7 14 chr10 36066117 36066408 -109522880 + AluJb SINE Alu 1 289 -23 1753 121 0 16 chr10 36068228 36068485 -109520803 - AluSx SINE Alu -8 304 52 390 121 0 0 chr10 36068493 36068559 -109520729 + (T)n Simple_repeat Simple_repeat 1 66 0 43620 33 21 2 chr10 36068561 36074599 -109514689 - L1HS LINE L1 0 6155 2 298 313 17 43 chr10 36074972 36075087 -109514201 - MIR SINE MIR -142 120 9 2098 107 4 0 chr10 36075244 36075568 -109513720 - AluSx SINE Alu 0 325 1 258 258 91 0 chr10 36075843 36075909 -109513379 - MIR3 SINE MIR -51 157 86 1972 154 0 0 chr10 36076092 36076385 -109512903 + AluSx SINE Alu 1 293 -19 198 118 0 0 chr10 36076389 36076423 -109512865 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 550 339 49 5 chr10 36076475 36076699 -109512589 - L3 LINE CR1 -278 1299 1066 262 90 15 104 chr10 36077041 36077108 -109512180 + HSMAR1 DNA Mariner 1 61 -1226 * 347 111 16 63 chr10 36077104 36077167 -109512121 - MADE1 DNA Mariner -20 60 1 228 274 41 0 chr10 36077907 36077980 -109511308 - MIR3 SINE MIR -6 202 127 324 316 89 32 chr10 36078175 36078365 -109510923 + MIR3 SINE MIR 1 201 -7 1043 178 0 6 chr10 36078643 36078823 -109510465 - FRAM SINE Alu -3 173 1 2009 165 0 0 chr10 36080201 36080510 -109508778 + AluSx SINE Alu 1 309 -3 467 277 57 0 chr10 36080512 36080653 -109508635 - MIR SINE MIR -13 249 101 183 250 70 70 chr10 36080733 36080833 -109508455 + MIR3 SINE MIR 109 208 0 2095 109 3 0 chr10 36081605 36081889 -109507399 + AluSx SINE Alu 14 298 -14 1996 230 67 66 chr10 36083119 36083178 -109506110 + L1MC4 LINE L1 7343 7400 -642 2179 127 0 3 chr10 36083178 36083478 -109505810 + AluSx SINE Alu 1 299 -13 1996 230 67 66 chr10 36083478 36084117 -109505171 + L1MC4 LINE L1 7400 8042 0 1345 139 15 157 chr10 36084215 36084539 -109504749 + AluJo SINE Alu 16 293 -19 1752 228 94 41 chr10 36085424 36086200 -109503088 + L1ME1 LINE L1 792 1592 -4814 3198 234 73 28 chr10 36086239 36088018 -109501270 + L1ME1 LINE L1 4434 6402 -24 183 80 0 0 chr10 36089384 36089409 -109499879 + (GA)n Simple_repeat Simple_repeat 1 25 0 274 269 59 50 chr10 36089508 36089627 -109499661 + MIR SINE MIR 49 169 -39 506 274 102 21 chr10 36090673 36090859 -109498429 + MER63A DNA MER1_type 1 201 -9 676 108 0 18 chr10 36090916 36091027 -109498261 + LTR7 LTR ERV1 296 404 -46 360 0 0 0 chr10 36091027 36091067 -109498221 + (CA)n Simple_repeat Simple_repeat 1 40 0 2286 107 0 0 chr10 36092597 36092895 -109496393 - AluSx SINE Alu -14 298 1 1610 127 59 0 chr10 36092925 36093161 -109496127 - L1PA10 LINE L1 -11 6157 5908 297 0 0 0 chr10 36095309 36095342 -109493946 + (TG)n Simple_repeat Simple_repeat 2 34 0 273 151 0 0 chr10 36096156 36096209 -109493079 + GA-rich Low_complexity Low_complexity 4 56 0 295 228 8 36 chr10 36096745 36096847 -109492441 + L1MDb LINE L1 2397 2521 -3907 2141 151 45 19 chr10 36096881 36097259 -109492029 + MER61D LTR ERV1 114 501 0 2872 250 85 33 chr10 36097259 36098541 -109490747 + L1MDb LINE L1 2492 3840 -2566 2082 138 3 3 chr10 36098545 36098843 -109490445 + AluSx SINE Alu 1 298 -14 526 290 97 6 chr10 36100221 36100397 -109488891 + MIR SINE MIR 46 237 -25 207 322 67 0 chr10 36100609 36100699 -109488589 - L3 LINE CR1 -505 1072 977 203 327 0 0 chr10 36100974 36101026 -109488262 + (TG)n Simple_repeat Simple_repeat 2 53 0 388 348 50 50 chr10 36101180 36101439 -109487849 + L2 LINE L2 2990 3248 -24 298 351 40 0 chr10 36101554 36101702 -109487586 - MIR SINE MIR -6 256 103 23 0 0 0 chr10 36102285 36102308 -109486980 + AT_rich Low_complexity Low_complexity 1 23 0 726 291 36 8 chr10 36103251 36103502 -109485786 + MER46C DNA MER2_type 80 337 -1 1170 292 134 38 chr10 36103540 36104301 -109484987 + L2 LINE L2 839 1672 -1642 1565 188 20 14 chr10 36104312 36104605 -109484683 + AluJo SINE Alu 1 295 -17 225 0 0 0 chr10 36105689 36105714 -109483574 + (TG)n Simple_repeat Simple_repeat 2 26 0 183 222 0 0 chr10 36108321 36108366 -109480922 + (TG)n Simple_repeat Simple_repeat 2 46 0 207 0 0 0 chr10 36108981 36109004 -109480284 + (TG)n Simple_repeat Simple_repeat 1 23 0 183 80 0 0 chr10 36112084 36112109 -109477179 + (C)n Simple_repeat Simple_repeat 1 25 0 207 182 0 0 chr10 36112278 36112322 -109476966 + (TCTCTG)n Simple_repeat Simple_repeat 6 49 0 209 267 0 0 chr10 36113097 36113142 -109476146 + (CGTG)n Simple_repeat Simple_repeat 4 48 0 332 380 0 0 chr10 36117881 36118010 -109471278 + (CGG)n Simple_repeat Simple_repeat 1 129 0 477 0 0 0 chr10 36119025 36119078 -109470210 + (CA)n Simple_repeat Simple_repeat 2 54 0 206 62 31 0 chr10 36119884 36119916 -109469372 + (TG)n Simple_repeat Simple_repeat 2 34 0 366 115 0 0 chr10 36120093 36120154 -109469134 + (TG)n Simple_repeat Simple_repeat 1 61 0 25 0 0 0 chr10 36120466 36120491 -109468797 + GC_rich Low_complexity Low_complexity 1 25 0 411 107 0 0 chr10 36121008 36121083 -109468205 + (CA)n Simple_repeat Simple_repeat 1 75 0 285 98 0 0 chr10 36121213 36121254 -109468034 + (TCTCCC)n Simple_repeat Simple_repeat 5 45 0 216 97 0 0 chr10 36121269 36121300 -109467988 + (TA)n Simple_repeat Simple_repeat 1 31 0 207 280 0 0 chr10 36122327 36122377 -109466911 + (TG)n Simple_repeat Simple_repeat 1 50 0 209 286 0 0 chr10 36122807 36122856 -109466432 + (TG)n Simple_repeat Simple_repeat 2 50 0 417 39 0 0 chr10 36122955 36123006 -109466282 + (CA)n Simple_repeat Simple_repeat 2 52 0 252 86 0 0 chr10 36123200 36123235 -109466053 + (CA)n Simple_repeat Simple_repeat 2 36 0 285 29 0 0 chr10 36123360 36123394 -109465894 + (CA)n Simple_repeat Simple_repeat 2 35 0 183 80 0 0 chr10 36123460 36123485 -109465803 + (TG)n Simple_repeat Simple_repeat 2 26 0 189 121 0 0 chr10 36123528 36123561 -109465727 + (TCTCTG)n Simple_repeat Simple_repeat 4 36 0 225 0 0 0 chr10 36123565 36123590 -109465698 + (TG)n Simple_repeat Simple_repeat 1 25 0 213 94 0 0 chr10 36123994 36124026 -109465262 + (TG)n Simple_repeat Simple_repeat 1 32 0 281 132 0 19 chr10 36124476 36124529 -109464759 + (CA)n Simple_repeat Simple_repeat 2 53 0 471 157 0 0 chr10 36124997 36125086 -109464202 + (TG)n Simple_repeat Simple_repeat 2 90 0 195 139 0 0 chr10 36132556 36132592 -109456696 + (CCG)n Simple_repeat Simple_repeat 3 38 0 249 281 16 33 chr10 36132919 36133040 -109456248 + (CGG)n Simple_repeat Simple_repeat 1 119 0 249 159 0 0 chr10 36134015 36134059 -109455229 + (TG)n Simple_repeat Simple_repeat 2 45 0 216 0 0 0 chr10 36134808 36134832 -109454456 + (CA)n Simple_repeat Simple_repeat 1 24 0 477 0 0 0 chr10 36140022 36140075 -109449213 + (TG)n Simple_repeat Simple_repeat 1 53 0 183 167 0 0 chr10 36140429 36140471 -109448817 + CT-rich Low_complexity Low_complexity 1 42 0 207 100 0 0 chr10 36140823 36140853 -109448435 + (TCCC)n Simple_repeat Simple_repeat 2 31 0 426 85 0 0 chr10 36142395 36142454 -109446834 + (TG)n Simple_repeat Simple_repeat 1 59 0 246 174 0 0 chr10 36143182 36143228 -109446060 + (CA)n Simple_repeat Simple_repeat 1 46 0 396 71 0 0 chr10 36144686 36144742 -109444546 + (TG)n Simple_repeat Simple_repeat 1 56 0 297 0 0 0 chr10 36145810 36145843 -109443445 + (TG)n Simple_repeat Simple_repeat 2 34 0 339 113 0 0 chr10 36146657 36146710 -109442578 + (GGGA)n Simple_repeat Simple_repeat 4 56 0 241 227 0 34 chr10 36147246 36147334 -109441954 + L1MEc LINE L1 2246 2330 -4066 1931 161 42 16 chr10 36147382 36147760 -109441528 + MER61D LTR ERV1 114 501 0 2823 262 66 35 chr10 36147761 36149048 -109440240 + L1MEc LINE L1 2300 3546 -2669 1953 132 0 4 chr10 36149048 36149328 -109439960 + AluSx SINE Alu 1 279 -33 306 0 0 0 chr10 36149328 36149362 -109439926 + (CA)n Simple_repeat Simple_repeat 1 34 0 2823 262 66 35 chr10 36149362 36149642 -109439646 + L1MEc LINE L1 3545 3916 -2299 318 254 42 74 chr10 36149653 36149870 -109439418 + L1MCc LINE L1 20 229 -6194 498 356 77 79 chr10 36149884 36150469 -109438819 + L1MCc LINE L1 577 1160 -5262 1891 232 76 49 chr10 36150509 36150642 -109438646 + L1MCc LINE L1 1024 1152 -5789 4251 175 18 8 chr10 36150642 36151362 -109437926 - MER44D DNA MER2_type -3 602 4 1891 232 76 49 chr10 36151362 36152373 -109436915 + L1MCc LINE L1 1152 2212 -4729 227 261 14 0 chr10 36152374 36152443 -109436845 + L1MCc LINE L1 2300 2369 -4572 1425 156 4 13 chr10 36152443 36152681 -109436607 + AluSg/x SINE Alu 68 303 -9 334 220 89 39 chr10 36152695 36153116 -109436172 + L1MCc LINE L1 2488 3010 -4112 305 235 49 49 chr10 36153117 36153219 -109436069 - L1MCa LINE L1 -2789 3637 3536 385 308 48 51 chr10 36153223 36153592 -109435696 + L1ME3 LINE L1 5884 6724 -7 307 228 37 103 chr10 36153476 36153612 -109435676 - L1MCa LINE L1 -4362 2064 1938 * 3279 151 13 6 chr10 36155946 36156469 -109432819 - MER1A DNA MER1_type 0 527 1 228 319 0 0 chr10 36156492 36156564 -109432724 - MIR SINE MIR -39 223 152 224 374 18 31 chr10 36157019 36157182 -109432106 + MIR SINE MIR 35 195 -67 204 240 0 40 chr10 36159034 36159084 -109430204 + C-rich Low_complexity Low_complexity 3 50 0 957 39 0 23 chr10 36159354 36159482 -109429806 - L1PA13 LINE L1 0 6163 6039 382 145 181 0 chr10 36159482 36159565 -109429723 + MER4A LTR ERV1 1 98 -566 1658 150 169 68 chr10 36159565 36159932 -109429356 + MER4A LTR ERV1 261 664 0 1419 76 5 5 chr10 36159932 36160130 -109429158 - L1PA13 LINE L1 -121 6042 5845 397 305 147 20 chr10 36160232 36160429 -109428859 + MIR SINE MIR 15 236 -26 1555 199 78 9 chr10 36160456 36160777 -109428511 - MER61A LTR ERV1 0 343 1 2965 118 37 76 chr10 36161076 36161618 -109427670 + LTR26B LTR ERV1 11 531 0 1425 203 32 32 chr10 36163703 36163817 -109425471 + AluJo SINE Alu 1 114 -198 2399 163 19 16 chr10 36163817 36164241 -109425047 + MSTB LTR MaLR 1 425 -1 1425 203 32 32 chr10 36164241 36164436 -109424852 + AluJo SINE Alu 113 310 -2 2402 94 3 0 chr10 36166321 36166630 -109422658 - AluSp SINE Alu -3 310 1 25 0 0 0 chr10 36168165 36168190 -109421098 + AT_rich Low_complexity Low_complexity 1 25 0 435 252 0 24 chr10 36168246 36168405 -109420883 - MIR SINE MIR -61 147 25 193 282 77 0 chr10 36168474 36168552 -109420736 - MIR SINE MIR -106 102 19 2246 109 0 13 chr10 36172187 36172490 -109416798 + AluSq SINE Alu 1 299 -14 186 342 25 0 chr10 36172510 36172589 -109416699 - L2 LINE L2 0 3313 3233 1978 139 0 14 chr10 36172914 36173209 -109416079 + AluJb SINE Alu 1 291 -21 400 129 58 6 chr10 36173226 36173397 -109415891 + (TA)n Simple_repeat Simple_repeat 1 180 0 365 289 103 73 chr10 36173549 36173850 -109415438 + L1ME LINE L1 5354 5663 -458 28 48 0 0 chr10 36174637 36174679 -109414609 + AT_rich Low_complexity Low_complexity 1 42 0 2336 99 0 0 chr10 36175002 36175333 -109413955 - AluSx SINE Alu 0 331 1 1945 142 26 0 chr10 36176209 36176511 -109412777 + AluSx SINE Alu 1 310 -2 1326 158 0 0 chr10 36176548 36176750 -109412538 + AluSg/x SINE Alu 98 299 -11 2149 131 0 0 chr10 36177688 36177993 -109411295 + AluSg SINE Alu 2 306 -4 211 218 0 18 chr10 36178621 36178676 -109410612 + MER5A DNA MER1_type 111 164 -25 1821 160 0 7 chr10 36179234 36179534 -109409754 - AluJb SINE Alu -4 308 11 1759 10 0 0 chr10 36179568 36179765 -109409523 - L1PA3 LINE L1 0 6155 5959 4049 128 3 13 chr10 36180624 36180906 -109408382 + L1PB3 LINE L1 5516 5799 -355 240 35 0 0 chr10 36180906 36180935 -109408353 + (TC)n Simple_repeat Simple_repeat 2 30 0 * 249 33 0 0 chr10 36180934 36180964 -109408324 + (TA)n Simple_repeat Simple_repeat 1 30 0 4049 128 3 13 chr10 36180935 36180963 -109408325 + L1PB3 LINE L1 5799 5826 -328 300 27 0 0 chr10 36180963 36181000 -109408288 + (CA)n Simple_repeat Simple_repeat 2 38 0 4049 128 3 13 chr10 36181000 36181352 -109407936 + L1PB3 LINE L1 5826 6144 -10 226 250 26 0 chr10 36181929 36182005 -109407283 - MIR SINE MIR -10 252 175 2267 102 3 0 chr10 36182535 36182828 -109406460 + AluSq SINE Alu 1 294 -19 477 249 53 21 chr10 36183231 36183420 -109405868 + L1ME3A LINE L1 5084 5278 -868 1237 218 136 12 chr10 36183423 36183754 -109405534 - MLT1F1 LTR MaLR -8 559 188 710 79 55 12 chr10 36183756 36183920 -109405368 + (TAGA)n Simple_repeat Simple_repeat 2 172 0 1896 134 16 32 chr10 36184022 36184335 -109404953 + AluSx SINE Alu 5 312 0 318 255 38 19 chr10 36184339 36184445 -109404843 - MLT1F1 LTR MaLR -485 108 1 2473 274 36 15 chr10 36184450 36185311 -109403977 + L1ME3A LINE L1 5283 6161 -9 22 0 0 0 chr10 36185383 36185405 -109403883 + AT_rich Low_complexity Low_complexity 1 22 0 2116 115 31 0 chr10 36185575 36185861 -109403427 + AluSx SINE Alu 1 295 -17 480 200 0 0 chr10 36186125 36186230 -109403058 + (TG)n Simple_repeat Simple_repeat 2 106 0 2316 110 0 0 chr10 36186659 36186960 -109402328 - AluSg SINE Alu -9 301 1 195 100 0 0 chr10 36187606 36187636 -109401652 + (A)n Simple_repeat Simple_repeat 1 30 0 266 340 50 13 chr10 36188653 36188812 -109400476 + L2 LINE L2 2542 2706 -608 1143 291 48 39 chr10 36188822 36189364 -109399924 - HERVL LTR ERVL -1243 4411 3865 339 353 39 13 chr10 36189396 36189552 -109399736 - HERVL LTR ERVL -1939 3825 3666 1792 110 6 110 chr10 36189552 36189897 -109399391 - AluSc SINE Alu 0 309 1 1172 164 18 50 chr10 36189902 36190122 -109399166 - AluJo SINE Alu -17 295 83 2244 330 64 35 chr10 36190194 36191173 -109398115 - HERVL LTR ERVL -2101 3553 2475 1872 131 39 20 chr10 36191173 36191479 -109397809 - AluJo SINE Alu 0 312 1 2244 330 64 35 chr10 36191479 36192305 -109396983 - HERVL LTR ERVL -3179 2475 1675 393 217 96 0 chr10 36192368 36192451 -109396837 + MER58A DNA MER1_type 1 91 -16 745 321 8 8 chr10 36192493 36192745 -109396543 - HERVL LTR ERVL -3882 1114 863 1524 161 56 25 chr10 36192745 36192834 -109396454 - AluJb SINE Alu -14 298 213 2844 128 22 54 chr10 36192834 36193336 -109395952 + LTR19A LTR ERV1 1 486 0 1524 161 56 25 chr10 36193336 36193531 -109395757 - AluJb SINE Alu -99 213 5 329 297 106 64 chr10 36193902 36194070 -109395218 - HERVL LTR ERVL -4570 426 266 222 37 0 0 chr10 36194070 36194097 -109395191 + (TA)n Simple_repeat Simple_repeat 2 28 0 2150 118 7 3 chr10 36194097 36194393 -109394895 - AluSc SINE Alu -12 297 1 329 297 106 64 chr10 36194393 36194630 -109394658 - HERVL LTR ERVL -4729 267 3 1030 315 39 24 chr10 36194632 36195089 -109394199 - LTR16B LTR ERVL 0 464 1 1657 199 99 54 chr10 36195094 36195267 -109394021 + L1ME1 LINE L1 4583 4747 -1399 1854 164 29 32 chr10 36195267 36195614 -109393674 - MER7A DNA MER2_type -2 344 1 1657 199 99 54 chr10 36195614 36195686 -109393602 + L1ME1 LINE L1 4747 4814 -1332 1167 124 139 20 chr10 36195686 36195888 -109393400 + MER30 DNA MER1_type 1 226 -4 1657 199 99 54 chr10 36195888 36196194 -109393094 + L1ME1 LINE L1 4814 5160 -986 713 167 0 0 chr10 36196196 36196310 -109392978 + AluJb SINE Alu 1 114 -198 412 315 0 33 chr10 36196677 36196861 -109392427 + GA-rich Low_complexity Low_complexity 1 178 0 467 213 0 28 chr10 36196929 36197070 -109392218 + AluY SINE Alu 175 311 0 3648 200 52 41 chr10 36197070 36197954 -109391334 + L1ME1 LINE L1 5154 6067 -99 2879 102 102 0 chr10 36197954 36198395 -109390893 - LTR19A LTR ERV1 0 486 1 3648 200 52 41 chr10 36198395 36198492 -109390796 + L1ME1 LINE L1 6067 6161 -5 25 0 0 0 chr10 36198566 36198591 -109390697 + AT_rich Low_complexity Low_complexity 1 25 0 523 226 162 39 chr10 36199594 36199798 -109389490 - MIR SINE MIR -26 236 8 350 215 0 13 chr10 36199800 36199879 -109389409 + MER116 DNA Mariner 3 80 0 229 314 36 29 chr10 36200064 36200204 -109389084 + L3 LINE CR1 1332 1472 -105 6313 65 3 3 chr10 36200380 36201160 -109388128 - LTR17 LTR ERV1 0 780 1 1979 135 30 3 chr10 36201475 36201771 -109387517 - AluSx SINE Alu -7 305 2 206 162 27 0 chr10 36203667 36203704 -109385584 + T-rich Low_complexity Low_complexity 2 39 0 671 181 94 56 chr10 36204432 36204592 -109384696 + FAM SINE Alu 1 166 -9 1783 171 0 7 chr10 36204596 36204909 -109384379 + AluJo SINE Alu 3 313 0 21 0 0 0 chr10 36205018 36205039 -109384249 + AT_rich Low_complexity Low_complexity 1 21 0 261 358 22 8 chr10 36205186 36205320 -109383968 + L2 LINE L2 2681 2816 -498 302 256 24 61 chr10 36205665 36205829 -109383459 + MER113 DNA MER1_type? 7 164 -357 261 297 68 0 chr10 36205829 36205903 -109383385 + L2 LINE L2 3163 3241 -31 522 279 128 21 chr10 36205916 36206043 -109383245 + MER113 DNA MER1_type? 146 258 -263 2976 118 27 0 chr10 36206043 36206457 -109382831 + MSTA LTR MaLR 4 428 0 522 279 128 21 chr10 36206457 36206666 -109382622 + MER113 DNA MER1_type? 258 518 -3 1909 154 0 13 chr10 36206941 36207239 -109382049 - AluJb SINE Alu -18 294 1 2311 126 35 32 chr10 36208107 36208481 -109380807 - THE1C LTR MaLR 0 375 1 263 323 121 0 chr10 36208743 36208842 -109380446 - L2 LINE L2 0 3272 3162 366 330 0 0 chr10 36208891 36209003 -109380285 - L2 LINE L2 0 3313 3202 447 260 36 6 chr10 36209133 36209350 -109379938 + L1M4c LINE L1 2033 2265 -4117 1952 121 3 24 chr10 36209356 36209515 -109379773 + AluSg SINE Alu 1 153 -157 5034 51 5 5 chr10 36209515 36210106 -109379182 + LTR10C LTR ERV1 1 591 0 1952 121 3 24 chr10 36210106 36210235 -109379053 + AluSg SINE Alu 153 283 -27 216 0 0 0 chr10 36210239 36210263 -109379025 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 5157 234 22 12 chr10 36210264 36211639 -109377649 + L1M4c LINE L1 2311 3660 -2722 2552 197 119 7 chr10 36211639 36212218 -109377070 - LTR48B LTR ERV1 0 644 1 679 171 0 0 chr10 36212636 36212753 -109376535 + L1MA10 LINE L1 5154 5270 -876 1243 221 0 0 chr10 36212753 36212997 -109376291 + AluSx SINE Alu 1 244 -68 4707 209 29 19 chr10 36213062 36213103 -109376185 + L1MA10 LINE L1 5259 5298 -1036 180 0 0 0 chr10 36213103 36213123 -109376165 + (CAT)n Simple_repeat Simple_repeat 2 21 0 4707 209 29 19 chr10 36213123 36213958 -109375330 + L1MA10 LINE L1 5298 6150 -184 213 39 0 0 chr10 36213958 36213984 -109375304 + (CA)n Simple_repeat Simple_repeat 1 26 0 4707 209 29 19 chr10 36213984 36214164 -109375124 + L1MA10 LINE L1 6150 6327 -7 2544 238 50 41 chr10 36214173 36214467 -109374821 - L1MEc LINE L1 -1081 5134 4844 1772 186 0 10 chr10 36214467 36214768 -109374520 - AluJo SINE Alu -12 300 3 2544 238 50 41 chr10 36214768 36215445 -109373843 - L1MEc LINE L1 -1371 4844 4154 329 200 13 13 chr10 36215516 36215604 -109373684 - L1MEc LINE L1 -2374 3841 3754 409 94 16 0 chr10 36215605 36215669 -109373619 + (TTCC)n Simple_repeat Simple_repeat 2 66 0 1456 274 111 40 chr10 36215677 36215749 -109373539 - L1MEc LINE L1 -2452 3763 3698 1901 175 136 18 chr10 36215749 36216132 -109373156 - MSTA LTR MaLR 0 428 1 1456 274 111 40 chr10 36216132 36217281 -109372007 - L1MEc LINE L1 -2517 3698 2316 918 201 0 73 chr10 36217284 36217488 -109371800 - Tigger5 DNA MER2_type -3 2320 2132 1366 225 16 29 chr10 36217503 36217532 -109371756 - Tigger5 DNA MER2_type -2016 307 279 4330 91 13 2 chr10 36217532 36218080 -109371208 + MER41A LTR ERV1 1 554 0 1366 225 16 29 chr10 36218080 36218361 -109370927 - Tigger5 DNA MER2_type -2044 279 1 724 284 41 86 chr10 36219315 36220387 -109368901 - L1MEc LINE L1 -4583 1813 790 1657 246 93 14 chr10 36220904 36221401 -109367887 - MLT1G1 LTR MaLR -2 593 1 422 312 102 32 chr10 36221697 36222098 -109367190 - L2 LINE L2 -1103 2211 1783 545 138 0 0 chr10 36222107 36222187 -109367101 - MER41B LTR ERV1 0 635 556 2030 85 8 8 chr10 36222295 36222555 -109366733 - AluSx SINE Alu -29 283 24 376 321 113 54 chr10 36222794 36223536 -109365752 - L2 LINE L2 -2190 1124 339 4383 134 19 34 chr10 36223697 36223998 -109365290 + LTR8A LTR ERV1 1 305 -422 5134 127 22 17 chr10 36223998 36224773 -109364515 - MER4E LTR ERV1 0 779 1 4383 134 19 34 chr10 36224773 36225209 -109364079 + LTR8A LTR ERV1 305 727 0 590 270 92 80 chr10 36227694 36228017 -109361271 - MLT1H LTR MaLR 0 549 218 2403 148 11 16 chr10 36228017 36228394 -109360894 + THE1C LTR MaLR 1 375 0 590 270 92 80 chr10 36228394 36228496 -109360792 - MLT1H LTR MaLR -331 218 119 2299 118 28 22 chr10 36228717 36229072 -109360216 - THE1B LTR MaLR 0 364 8 180 167 130 19 chr10 36230569 36230616 -109358672 - L3 LINE CR1 -880 697 642 441 0 0 0 chr10 36230616 36230665 -109358623 + (TCTA)n Simple_repeat Simple_repeat 4 52 0 2562 158 41 0 chr10 36233516 36233928 -109355360 - MSTB1 LTR MaLR 0 432 4 229 313 40 0 chr10 36234286 36234385 -109354903 - MIR SINE MIR -56 206 104 1167 214 54 90 chr10 36234402 36234790 -109354498 - MLT1B LTR MaLR -16 374 1 231 217 22 0 chr10 36234790 36234836 -109354452 - MIR SINE MIR -126 82 36 184 281 201 58 chr10 36235178 36235317 -109353971 + MIR3 SINE MIR 16 174 -34 23 33 0 0 chr10 36235923 36235953 -109353335 + AT_rich Low_complexity Low_complexity 1 30 0 277 240 53 93 chr10 36237293 36237414 -109351874 + MIR SINE MIR 33 148 -114 2253 110 0 31 chr10 36237414 36237733 -109351555 - AluSx SINE Alu -3 309 1 277 240 53 93 chr10 36237733 36237761 -109351527 + MIR SINE MIR 148 176 -86 379 202 76 59 chr10 36237761 36237880 -109351408 - MIR SINE MIR -62 200 80 751 232 54 54 chr10 36238117 36238181 -109351107 - MIR SINE MIR -8 254 191 1683 121 0 4 chr10 36238181 36238412 -109350876 + MER30 DNA MER1_type 1 230 0 751 232 54 54 chr10 36238412 36238571 -109350717 - MIR SINE MIR -70 192 31 487 161 0 21 chr10 36238708 36238801 -109350487 - LTR33 LTR ERVL -7 514 424 1739 160 22 0 chr10 36238937 36239375 -109349913 + AluSx SINE Alu 1 444 0 228 111 0 0 chr10 36239412 36239448 -109349840 + (GA)n Simple_repeat Simple_repeat 1 36 0 602 278 91 27 chr10 36239458 36239721 -109349567 - LTR33 LTR ERVL -237 284 5 267 317 33 55 chr10 36239748 36239931 -109349357 - L2 LINE L2 -1386 1928 1750 296 250 192 0 chr10 36240382 36240486 -109348802 + LTR47A LTR ERVL 261 384 -68 1195 104 0 0 chr10 36241895 36242059 -109347229 + AluY SINE Alu 137 300 -11 182 269 0 39 chr10 36242201 36242253 -109347035 - L2 LINE L2 0 3313 3264 202 345 80 85 chr10 36242573 36242661 -109346627 - L2 LINE L2 0 3272 3185 1975 142 0 7 chr10 36242661 36242994 -109346294 - AluSq SINE Alu 0 313 1 202 345 80 85 chr10 36242994 36243354 -109345934 - L2 LINE L2 -87 3185 2826 2057 164 9 18 chr10 36244204 36244546 -109344742 + MER44D DNA MER2_type 1 609 0 452 316 12 36 chr10 36245175 36245343 -109343945 + MER5A DNA MER1_type 26 189 0 396 129 0 29 chr10 36245726 36245796 -109343492 + MLT1A1 LTR MaLR 1 68 -297 928 248 139 34 chr10 36245796 36246221 -109343067 + LTR1B LTR ERV1 28 496 -330 1982 112 34 7 chr10 36246221 36246516 -109342772 + AluSq SINE Alu 11 313 0 270 209 48 150 chr10 36246543 36246730 -109342558 + LTR28 LTR ERV1 838 1005 -15 1490 205 38 7 chr10 36246753 36247046 -109342242 + MLT1A1 LTR MaLR 64 365 0 26 88 0 0 chr10 36248250 36248318 -109340970 + AT_rich Low_complexity Low_complexity 1 68 0 1297 284 91 45 chr10 36248370 36249174 -109340114 - L1M4 LINE L1 -922 5224 4384 2130 249 47 74 chr10 36249202 36249280 -109340008 + L1ME3A LINE L1 5254 5333 -837 1846 181 0 3 chr10 36249280 36249589 -109339699 + AluJb SINE Alu 1 308 -4 2130 249 47 74 chr10 36249589 36249703 -109339585 + L1ME3A LINE L1 5333 5449 -721 1947 162 23 45 chr10 36249703 36249806 -109339482 + MER2 DNA MER2_type 1 105 -239 1554 161 88 0 chr10 36249806 36250100 -109339188 + AluSx SINE Alu 1 317 0 1947 162 23 45 chr10 36250100 36250347 -109338941 + MER2 DNA MER2_type 105 344 0 2130 249 47 74 chr10 36250347 36251033 -109338255 + L1ME3A LINE L1 5449 6109 -61 362 304 19 0 chr10 36251447 36251608 -109337680 + (TA)n Simple_repeat Simple_repeat 1 164 0 311 247 36 13 chr10 36252270 36252578 -109336710 + (TGAA)n Simple_repeat Simple_repeat 1 315 0 359 328 35 18 chr10 36252705 36252876 -109336412 - LTR16C LTR ERVL -4 487 314 1325 210 176 29 chr10 36253118 36253520 -109335768 + MLT2B1 LTR ERVL 1 467 -53 468 51 0 0 chr10 36253520 36253579 -109335709 + (TC)n Simple_repeat Simple_repeat 2 60 0 1325 210 176 29 chr10 36253579 36253591 -109335697 + MLT2B1 LTR ERVL 467 476 -44 252 167 42 0 chr10 36253618 36253690 -109335598 + (TA)n Simple_repeat Simple_repeat 1 75 0 249 108 0 0 chr10 36253691 36253728 -109335560 + (CA)n Simple_repeat Simple_repeat 2 38 0 1564 194 29 51 chr10 36253728 36253871 -109335417 + MER2 DNA MER2_type 3 148 -197 1457 94 94 9 chr10 36253871 36254083 -109335205 - MER30 DNA MER1_type 0 230 1 1564 194 29 51 chr10 36254083 36254290 -109334998 + MER2 DNA MER2_type 148 345 0 2847 132 4 69 chr10 36255386 36255465 -109333823 + L1PA15 LINE L1 5703 5786 -379 2076 124 6 19 chr10 36255465 36255779 -109333509 + AluSx SINE Alu 1 310 -2 2847 132 4 69 chr10 36255779 36256192 -109333096 + L1PA15 LINE L1 5786 6163 -2 3226 97 12 7 chr10 36256408 36256840 -109332448 - MER57B LTR ERV1 0 434 1 1059 248 129 16 chr10 36257457 36257884 -109331404 - MLT1D LTR MaLR 0 505 31 2021 139 16 3 chr10 36257983 36258286 -109331002 - AluJb SINE Alu -5 307 1 2392 131 64 5 chr10 36258942 36259346 -109329942 - MSTA LTR MaLR 0 428 1 353 352 36 10 chr10 36259646 36259842 -109329446 + MIR SINE MIR 8 208 -54 2405 162 70 4 chr10 36261022 36261497 -109327791 - L1MB4 LINE L1 -2 6178 5673 1491 174 49 28 chr10 36261497 36261831 -109327457 - MSTA LTR MaLR -9 366 1 1443 178 0 46 chr10 36261831 36262073 -109327215 - L1MB4 LINE L1 -492 5688 5461 1950 201 56 7 chr10 36262073 36262516 -109326772 + MER31B LTR ERV1 2 466 0 1443 178 0 46 chr10 36262516 36262577 -109326711 - L1MB4 LINE L1 -719 5461 5399 1515 181 23 43 chr10 36262710 36263009 -109326279 + AluJo SINE Alu 1 293 -19 1901 141 25 3 chr10 36263011 36263295 -109325993 + AluSg SINE Alu 1 290 -20 210 234 64 0 chr10 36264565 36264612 -109324676 - MER91A DNA MER1_type -19 177 128 2085 108 0 74 chr10 36265439 36265763 -109323525 - AluSq SINE Alu -13 300 1 360 309 53 33 chr10 36265997 36266181 -109323107 - MIR SINE MIR -69 139 17 527 216 10 0 chr10 36266880 36266977 -109322311 - MER58A DNA MER1_type -6 101 4 465 319 123 36 chr10 36269199 36269822 -109319466 + L2 LINE L2 2599 3285 -28 477 236 50 71 chr10 36269914 36270096 -109319192 + L1ME LINE L1 5551 5728 -393 387 0 0 0 chr10 36271221 36271264 -109318024 + (TG)n Simple_repeat Simple_repeat 2 44 0 30 0 0 0 chr10 36271860 36271890 -109317398 + AT_rich Low_complexity Low_complexity 1 30 0 2029 133 3 30 chr10 36272043 36272345 -109316943 - AluSq SINE Alu -19 294 1 188 200 29 0 chr10 36273116 36273151 -109316137 + MIR SINE MIR 38 73 -135 2260 174 87 5 chr10 36273211 36273637 -109315651 + LOR1b LTR ERV1 1 461 0 2323 112 0 0 chr10 36273886 36274191 -109315097 + AluSq SINE Alu 1 305 -8 718 138 7 90 chr10 36276508 36276653 -109312635 - FLAM_A SINE Alu 0 133 1 189 0 0 0 chr10 36277037 36277058 -109312230 + (TGAA)n Simple_repeat Simple_repeat 3 23 0 1638 168 26 53 chr10 36277882 36278185 -109311103 + AluJo SINE Alu 1 295 -17 2347 100 10 0 chr10 36279123 36279432 -109309856 - AluSq SINE Alu 0 313 2 1273 129 20 0 chr10 36279551 36279753 -109309535 + MER2 DNA MER2_type 5 210 -135 560 70 12 0 chr10 36280484 36280570 -109308718 + (TA)n Simple_repeat Simple_repeat 1 87 0 1636 161 24 37 chr10 36281270 36281568 -109307720 + AluJo SINE Alu 1 294 -18 30 0 0 0 chr10 36281568 36281598 -109307690 + AT_rich Low_complexity Low_complexity 1 30 0 186 71 0 0 chr10 36282079 36282107 -109307181 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 2317 115 0 3 chr10 36282111 36282424 -109306864 - AluSx SINE Alu 0 312 1 192 40 0 0 chr10 36282921 36282946 -109306342 + (TAAA)n Simple_repeat Simple_repeat 4 28 0 198 0 0 0 chr10 36283738 36283760 -109305528 + (T)n Simple_repeat Simple_repeat 1 22 0 3063 125 7 0 chr10 36285034 36285458 -109303830 + MER1A DNA MER1_type 103 529 0 190 346 0 0 chr10 36285579 36285657 -109303631 + L2 LINE L2 2890 2967 -305 373 203 219 41 chr10 36286248 36286371 -109302917 + MIR SINE MIR 7 151 -111 1935 171 9 91 chr10 36286405 36286453 -109302835 + MER82 DNA MER2_type 2 52 -601 1980 146 4 4 chr10 36286453 36286734 -109302554 + AluJo SINE Alu 1 281 -31 212 0 36 0 chr10 36286738 36286766 -109302522 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 1935 171 9 91 chr10 36286766 36287163 -109302125 + MER82 DNA MER2_type 55 415 -238 1553 206 28 22 chr10 36287166 36287504 -109301784 + MLT2C1 LTR ERVL 83 406 -8 1927 134 55 30 chr10 36287558 36287924 -109301364 - THE1C LTR MaLR 0 375 1 298 238 0 0 chr10 36288119 36288182 -109301106 - MIR3 SINE MIR -6 202 140 263 320 52 41 chr10 36289468 36289640 -109299648 - MIR3 SINE MIR -18 190 17 266 191 79 0 chr10 36290777 36290840 -109298448 + MIR SINE MIR 185 252 -10 2203 111 3 0 chr10 36291181 36291470 -109297818 - AluSg SINE Alu -20 290 1 219 127 48 0 chr10 36291512 36291575 -109297713 + (TA)n Simple_repeat Simple_repeat 1 66 0 28 48 0 0 chr10 36291644 36291686 -109297602 + AT_rich Low_complexity Low_complexity 1 42 0 28 48 0 0 chr10 36291742 36291784 -109297504 + AT_rich Low_complexity Low_complexity 1 42 0 319 340 45 13 chr10 36291815 36291971 -109297317 - HAL1 LINE L1 -769 1738 1578 261 295 69 98 chr10 36292063 36292510 -109296778 - MLT1J LTR MaLR -76 435 2 655 128 0 0 chr10 36292765 36292859 -109296429 - AluJb SINE Alu -16 296 203 2101 129 0 10 chr10 36293677 36293986 -109295302 - AluSx SINE Alu -6 306 1 1558 190 4 4 chr10 36294171 36294439 -109294849 - AluJb SINE Alu -44 268 1 1351 192 4 0 chr10 36294441 36294717 -109294571 - L1 LINE L1 -3104 3042 2766 283 115 0 19 chr10 36294717 36294769 -109294519 - Alu SINE Alu 0 302 252 4337 173 10 33 chr10 36297001 36297898 -109291390 - L1MC1 LINE L1 -165 6666 5789 4467 207 49 37 chr10 36298410 36299505 -109289783 - L1MC1 LINE L1 -5145 1489 278 511 179 38 28 chr10 36299677 36299783 -109289505 - MER7A DNA MER2_type -241 105 1 279 0 0 0 chr10 36299788 36299819 -109289469 + (CA)n Simple_repeat Simple_repeat 2 32 0 34 55 0 0 chr10 36300031 36300086 -109289202 + AT_rich Low_complexity Low_complexity 1 55 0 1099 111 6 6 chr10 36300920 36301100 -109288188 + (TTC)n Simple_repeat Simple_repeat 1 180 0 2214 119 0 0 chr10 36302542 36302844 -109286444 + AluSx SINE Alu 1 302 -10 235 331 69 14 chr10 36303460 36303605 -109285683 - L2 LINE L2 -190 3082 2930 1440 116 4 4 chr10 36353998 36354223 -109235065 + L1MA4A LINE L1 6072 6296 -7 1373 168 6 128 chr10 36354245 36354572 -109234716 + AluJb SINE Alu 1 287 -15 1044 121 56 0 chr10 36356226 36356424 -109232864 - L1MA8 LINE L1 -5 6286 6078 2323 102 3 0 chr10 36356426 36356730 -109232558 - AluSg SINE Alu -5 305 1 404 182 0 13 chr10 36356732 36356809 -109232479 - AluJo SINE Alu -176 136 61 805 207 86 94 chr10 36356818 36357133 -109232155 + L2 LINE L2 2758 3074 -239 2070 122 7 14 chr10 36357947 36358241 -109231047 - AluSx SINE Alu -20 292 1 1560 180 54 0 chr10 36358325 36358447 -109230841 + AluJo SINE Alu 1 115 -197 189 0 0 0 chr10 36358447 36358468 -109230820 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 1560 180 54 0 chr10 36358468 36358623 -109230665 + AluJo SINE Alu 115 293 -19 231 301 60 24 chr10 36358662 36358745 -109230543 - MIR3 SINE MIR -9 199 114 696 266 47 10 chr10 36358766 36358958 -109230330 - MIR SINE MIR 0 262 64 240 222 74 49 chr10 36359005 36359086 -109230202 - MIR SINE MIR -107 101 19 3007 83 3 0 chr10 36360265 36360628 -109228660 + THE1B LTR MaLR 1 364 0 27 0 0 0 chr10 36360865 36360892 -109228396 + AT_rich Low_complexity Low_complexity 1 27 0 341 94 19 0 chr10 36361426 36361479 -109227809 + MER9 LTR ERVK 1 54 -457 397 294 90 28 chr10 36361599 36361776 -109227512 + LTR33 LTR ERVL 334 521 0 193 307 133 0 chr10 36362154 36362229 -109227059 - MIR3 SINE MIR -21 187 103 2018 150 0 0 chr10 36362398 36362692 -109226596 - AluJb SINE Alu -18 294 1 2296 117 0 0 chr10 36362827 36363135 -109226153 + AluSx SINE Alu 1 308 -4 295 214 34 0 chr10 36363150 36363239 -109226049 + (TATATG)n Simple_repeat Simple_repeat 3 94 0 1543 193 23 3 chr10 36363735 36364040 -109225248 - AluJb SINE Alu -1 311 1 5670 86 9 0 chr10 36364516 36365201 -109224087 + LTR8 LTR ERV1 1 691 0 257 352 24 24 chr10 36365617 36365742 -109223546 + MIR SINE MIR 22 146 -62 1497 171 4 29 chr10 36367312 36367586 -109221702 + AluJo SINE Alu 21 287 -25 1092 126 0 7 chr10 36369300 36369601 -109219687 + (GGAA)n Simple_repeat Simple_repeat 4 300 0 999 125 0 0 chr10 36370198 36370334 -109218954 + AluSq/x SINE Alu 1 136 -176 683 80 20 20 chr10 36370336 36370436 -109218852 + AluY SINE Alu 210 309 -2 998 167 0 0 chr10 36370568 36370730 -109218558 + AluSx SINE Alu 144 305 -5 2201 128 0 0 chr10 36371660 36371957 -109217331 - AluSx SINE Alu -15 297 1 1714 172 0 40 chr10 36372818 36373120 -109216168 - AluJb SINE Alu -22 290 1 243 359 39 64 chr10 36373444 36373678 -109215610 - L2 LINE L2 -13 3259 3032 1731 160 59 3 chr10 36373697 36373985 -109215303 + AluJb SINE Alu 1 304 -8 2636 55 0 0 chr10 36374953 36375261 -109214027 + AluY SINE Alu 1 308 -3 950 291 19 12 chr10 36375443 36375701 -109213587 - MLT1L LTR MaLR -7 608 349 504 269 72 10 chr10 36375751 36375944 -109213344 - MLT1L LTR MaLR -409 206 2 276 333 12 0 chr10 36375945 36376026 -109213262 - L2 LINE L2 -47 3266 3185 2328 99 3 3 chr10 36376666 36376969 -109212319 - AluSq SINE Alu -10 303 1 3123 153 39 7 chr10 36376982 36377763 -109211525 + L1MA8 LINE L1 4856 5809 -482 367 29 57 14 chr10 36377763 36377833 -109211455 + (TAGA)n Simple_repeat Simple_repeat 2 74 0 3123 153 39 7 chr10 36377833 36378328 -109210960 + L1MA8 LINE L1 5809 6287 -4 1961 107 0 11 chr10 36378402 36378663 -109210625 + AluSx SINE Alu 1 258 -54 561 265 157 10 chr10 36378739 36378943 -109210345 - MIR SINE MIR 0 262 29 322 241 30 108 chr10 36379713 36379909 -109209379 + MIR SINE MIR 38 216 -46 1667 169 30 71 chr10 36380064 36380266 -109209022 - MLT1B LTR MaLR -35 355 173 1870 165 0 16 chr10 36380266 36380569 -109208719 - AluJb SINE Alu -14 298 1 1667 169 30 71 chr10 36380569 36380733 -109208555 - MLT1B LTR MaLR -217 173 4 212 0 36 0 chr10 36380857 36380885 -109208403 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 1725 169 10 7 chr10 36380890 36381185 -109208103 - AluJo SINE Alu -16 296 1 2788 105 0 3 chr10 36381289 36381660 -109207628 - L1PB1 LINE L1 0 6151 5782 223 78 31 62 chr10 36381669 36381733 -109207555 + (TA)n Simple_repeat Simple_repeat 2 63 0 180 357 12 12 chr10 36384217 36384301 -109204987 - MIR SINE MIR -22 240 157 2328 96 6 3 chr10 36384420 36384732 -109204556 - AluSq SINE Alu 0 313 1 219 139 0 0 chr10 36386097 36386133 -109203155 + (T)n Simple_repeat Simple_repeat 1 36 0 334 328 89 64 chr10 36387032 36387706 -109201582 + L2 LINE L2 2196 2886 -428 227 338 0 26 chr10 36387760 36387837 -109201451 + L2 LINE L2 2992 3066 -206 368 324 143 50 chr10 36388231 36388399 -109200889 - L2 LINE L2 -15 3298 3096 2194 133 0 0 chr10 36388399 36388701 -109200587 + AluSq SINE Alu 1 302 -11 368 324 143 50 chr10 36388701 36388791 -109200497 - L2 LINE L2 -217 3096 3016 319 210 25 109 chr10 36388792 36388911 -109200377 - ERVL LTR ERVL -1119 4645 4537 249 180 0 0 chr10 36388950 36389000 -109200288 + CT-rich Low_complexity Low_complexity 3 52 0 2112 315 103 75 chr10 36389061 36390467 -109198821 - ERVL LTR ERVL -1382 4382 2887 4760 170 3 4 chr10 36390467 36391197 -109198091 + MER44D DNA MER2_type 4 604 -1 2112 315 103 75 chr10 36391197 36392040 -109197248 - ERVL LTR ERVL -2877 2887 2069 213 39 0 0 chr10 36392140 36392166 -109197122 + (TTTTC)n Simple_repeat Simple_repeat 2 27 0 2124 121 0 0 chr10 36392168 36392450 -109196838 - AluSx SINE Alu -30 282 1 1206 325 103 44 chr10 36392451 36393530 -109195758 + L2 LINE L2 2148 3309 -4 307 323 82 39 chr10 36393579 36393836 -109195452 - ERVL LTR ERVL -3736 2028 1761 358 348 43 29 chr10 36394533 36394878 -109194410 - L2 LINE L2 -523 2791 2442 233 161 81 48 chr10 36395184 36395246 -109194042 - MER91C DNA MER1_type -20 120 57 207 0 0 0 chr10 36396067 36396090 -109193198 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2222 139 96 3 chr10 36398135 36398507 -109190781 + MSTB1 LTR MaLR 4 410 -22 1659 119 13 0 chr10 36398507 36398734 -109190554 - MER30 DNA MER1_type 0 230 1 265 171 0 61 chr10 36398814 36398896 -109190392 + T-rich Low_complexity Low_complexity 6 82 0 232 157 0 39 chr10 36398988 36399039 -109190249 + T-rich Low_complexity Low_complexity 6 54 0 300 53 0 0 chr10 36400561 36400599 -109188689 + (CA)n Simple_repeat Simple_repeat 1 38 0 367 172 11 11 chr10 36400617 36400704 -109188584 + (TA)n Simple_repeat Simple_repeat 2 88 0 1894 163 0 0 chr10 36400705 36400993 -109188295 - AluSx SINE Alu -24 288 1 409 259 96 32 chr10 36401095 36401241 -109188047 - MIR SINE MIR -65 143 15 21 82 0 0 chr10 36401609 36401658 -109187630 + AT_rich Low_complexity Low_complexity 1 49 0 1587 177 9 78 chr10 36401664 36401986 -109187302 + AluJo SINE Alu 1 300 -2 288 264 0 47 chr10 36402688 36402794 -109186494 + LTR67 LTR ERVL 457 557 0 1849 152 24 3 chr10 36405009 36405299 -109183989 + AluJb SINE Alu 1 296 -16 26 30 0 0 chr10 36405689 36405722 -109183566 + AT_rich Low_complexity Low_complexity 1 33 0 1420 196 0 8 chr10 36405722 36405972 -109183316 - AluJo SINE Alu -64 248 1 714 335 102 39 chr10 36406266 36407078 -109182210 - L2 LINE L2 -475 2839 1977 318 326 21 21 chr10 36407117 36407258 -109182030 - MIR3 SINE MIR -33 175 35 23 0 0 0 chr10 36407592 36407615 -109181673 + AT_rich Low_complexity Low_complexity 1 23 0 4533 131 5 2 chr10 36408002 36408635 -109180653 + MER41B LTR ERV1 1 635 0 21 0 0 0 chr10 36409182 36409203 -109180085 + AT_rich Low_complexity Low_complexity 1 21 0 207 0 0 0 chr10 36409185 36409208 -109180080 + (TTA)n Simple_repeat Simple_repeat 2 24 0 3564 151 54 72 chr10 36410377 36411177 -109178111 + LTR1 LTR ERV1 1 785 0 4054 127 26 2 chr10 36411569 36412189 -109177099 - MER41B LTR ERV1 0 635 1 2162 116 0 29 chr10 36412230 36412541 -109176747 + AluSq SINE Alu 5 306 -7 500 118 0 0 chr10 36414774 36414842 -109174446 + AluJ/FLAM SINE Alu 17 84 -228 24 0 0 0 chr10 36415663 36415687 -109173601 + AT_rich Low_complexity Low_complexity 1 24 0 2006 139 0 0 chr10 36416758 36417067 -109172221 + AluSx SINE Alu 2 310 0 234 0 0 0 chr10 36417788 36417814 -109171474 + (TG)n Simple_repeat Simple_repeat 1 26 0 265 250 0 0 chr10 36418365 36418462 -109170826 + (TTCA)n Simple_repeat Simple_repeat 1 97 0 915 129 0 0 chr10 36418466 36418590 -109170698 - FLAM_C SINE Alu -18 125 2 2355 103 7 0 chr10 36418925 36419235 -109170053 + AluSx SINE Alu 1 312 0 2380 133 23 16 chr10 36419411 36419796 -109169492 - LTR45B LTR ERV1 -98 391 4 1755 215 37 37 chr10 36420191 36420656 -109168632 - MLT1C LTR MaLR 0 467 3 15075 133 30 15 chr10 36420709 36422896 -109166392 + Tigger1 DNA MER2_type 1 2228 -190 1994 156 7 0 chr10 36422896 36423197 -109166091 - AluSx SINE Alu -7 305 3 15075 133 30 15 chr10 36423197 36423391 -109165897 + Tigger1 DNA MER2_type 2228 2418 0 195 167 104 21 chr10 36425310 36425358 -109163930 - MIR SINE MIR -9 253 202 1746 167 29 4 chr10 36425475 36425756 -109163532 + AluJo SINE Alu 5 292 -20 382 260 97 15 chr10 36426016 36426212 -109163076 - L1MC4a LINE L1 -1894 5914 5703 1854 104 23 68 chr10 36426455 36426764 -109162524 - AluSq SINE Alu -18 295 1 233 252 193 47 chr10 36428401 36428662 -109160626 + L1ME4a LINE L1 5754 6072 -49 2092 121 21 0 chr10 36428662 36428952 -109160336 + AluSx SINE Alu 1 296 -16 233 252 193 47 chr10 36428952 36429011 -109160277 + L1ME4a LINE L1 6072 6121 0 2122 73 24 21 chr10 36429014 36429301 -109159987 + AluY SINE Alu 1 288 -23 194 62 31 0 chr10 36429304 36429336 -109159952 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 2074 120 27 3 chr10 36429341 36429641 -109159647 + AluSx SINE Alu 1 307 -5 1870 212 104 103 chr10 36430782 36431474 -109157814 - LTR8A LTR ERV1 -1 726 34 253 283 38 47 chr10 36431594 36431700 -109157588 + MIR3 SINE MIR 85 189 -19 1094 125 0 12 chr10 36432245 36432405 -109156883 - FRAM SINE Alu -9 167 10 1380 186 11 34 chr10 36432416 36432685 -109156603 - AluJb SINE Alu -7 305 43 1345 209 56 48 chr10 36433046 36433386 -109155902 - MER21B LTR ERV1 -1 862 520 1223 195 112 16 chr10 36433386 36433460 -109155828 + LTR39 LTR ERV1 2 67 -716 1909 151 0 24 chr10 36433460 36433758 -109155530 + AluJb SINE Alu 6 296 -16 1223 195 112 16 chr10 36433758 36434021 -109155267 + LTR39 LTR ERV1 67 402 -381 1179 178 26 74 chr10 36434009 36434106 -109155182 + LTR39 LTR ERV1 527 627 -156 * 2147 139 0 3 chr10 36434106 36434416 -109154872 + AluSq SINE Alu 1 309 -4 1179 178 26 74 chr10 36434416 36434588 -109154700 + LTR39 LTR ERV1 627 783 0 1220 199 182 96 chr10 36434595 36434738 -109154550 - MER21B LTR ERV1 -340 523 394 4267 122 8 14 chr10 36434738 36435377 -109153911 - MER41B LTR ERV1 0 635 1 1220 199 182 96 chr10 36435377 36435710 -109153578 - MER21B LTR ERV1 -469 394 6 1865 151 14 0 chr10 36436417 36436720 -109152568 - AluSx SINE Alu 0 307 1 1812 150 0 17 chr10 36437703 36437990 -109151298 + AluJo SINE Alu 2 283 -29 366 302 148 0 chr10 36439198 36439380 -109149908 - MIR SINE MIR -6 256 48 2509 87 0 0 chr10 36439419 36439730 -109149558 - AluSx SINE Alu -1 311 1 216 0 0 0 chr10 36440330 36440354 -109148934 + (CA)n Simple_repeat Simple_repeat 1 24 0 480 71 12 83 chr10 36440629 36440676 -109148612 - MADE1 DNA Mariner -1 79 39 1585 130 153 0 chr10 36440676 36440938 -109148350 + AluSx SINE Alu 1 302 0 480 71 12 83 chr10 36440938 36440974 -109148314 - MADE1 DNA Mariner -41 39 2 457 293 19 56 chr10 36441494 36441572 -109147716 - MIR SINE MIR -44 218 139 2177 100 4 0 chr10 36441572 36441874 -109147414 - AluSx SINE Alu 0 303 1 457 293 19 56 chr10 36441874 36442011 -109147277 - MIR SINE MIR -123 139 13 647 110 53 17 chr10 36442782 36443010 -109146278 + (TCTA)n Simple_repeat Simple_repeat 1 236 0 213 154 0 0 chr10 36443412 36443451 -109145837 + (TG)n Simple_repeat Simple_repeat 1 39 0 973 193 17 0 chr10 36445457 36445638 -109143650 - AluJo SINE Alu -10 302 119 718 183 0 0 chr10 36445673 36445799 -109143489 - AluJo SINE Alu -186 126 1 1499 189 54 4 chr10 36445829 36446109 -109143179 + AluJb SINE Alu 3 296 -16 402 143 0 0 chr10 36446625 36446681 -109142607 - Alu SINE Alu -10 292 237 1892 130 7 0 chr10 36446681 36446951 -109142337 - AluSx SINE Alu -40 272 1 206 343 0 0 chr10 36447072 36447145 -109142143 + L2 LINE L2 3241 3313 0 2075 136 7 0 chr10 36447823 36448131 -109141157 - AluSx SINE Alu 0 312 3 215 260 27 0 chr10 36448582 36448607 -109140681 + (TA)n Simple_repeat Simple_repeat 2 25 -51 2053 129 6 13 chr10 36448607 36448918 -109140370 - AluSx SINE Alu -3 309 1 215 260 27 0 chr10 36448918 36448965 -109140323 + (TA)n Simple_repeat Simple_repeat 25 76 0 870 179 60 0 chr10 36449032 36449183 -109140105 - AluSg/x SINE Alu -16 296 137 1453 236 120 85 chr10 36449224 36449571 -109139717 - MER21B LTR ERV1 -124 739 405 2749 94 6 0 chr10 36449571 36449933 -109139355 - THE1B LTR MaLR 0 364 1 1453 236 120 85 chr10 36449933 36450279 -109139009 - MER21B LTR ERV1 -458 405 22 1760 244 26 24 chr10 36450539 36450997 -109138291 + L1MC4 LINE L1 7335 7793 -249 324 263 35 76 chr10 36451013 36451302 -109137986 + L1MC4 LINE L1 7759 8035 -7 1478 164 52 45 chr10 36451304 36451591 -109137697 + AluJo SINE Alu 1 289 -23 2315 107 85 8 chr10 36452088 36452610 -109136678 - MER51A LTR ERV1 -1 633 1 456 104 0 0 chr10 36453703 36453770 -109135518 + (TA)n Simple_repeat Simple_repeat 2 68 0 1602 190 24 10 chr10 36455151 36455441 -109133847 + AluJo SINE Alu 3 296 -16 2144 92 4 0 chr10 36456139 36456444 -109132844 - AluY SINE Alu 0 306 1 2170 111 3 3 chr10 36456508 36456806 -109132482 - AluSg SINE Alu -12 298 1 261 98 0 0 chr10 36457752 36457793 -109131495 + (CA)n Simple_repeat Simple_repeat 2 42 0 3656 104 7 59 chr10 36459164 36459463 -109129825 + LTR26B LTR ERV1 2 260 -271 2243 126 7 0 chr10 36459463 36459773 -109129515 - AluSx SINE Alu 0 312 1 3656 104 7 59 chr10 36459773 36460032 -109129256 + LTR26B LTR ERV1 260 531 0 319 319 151 7 chr10 36460343 36460564 -109128724 - MIR3 SINE MIR -10 252 4 243 310 184 0 chr10 36462225 36462312 -109126976 + L2 LINE L2 3168 3270 -2 23 54 0 0 chr10 36462314 36462351 -109126937 + AT_rich Low_complexity Low_complexity 1 37 0 218 296 19 0 chr10 36462439 36462493 -109126795 + L2 LINE L2 3217 3271 -1 5039 99 19 1 chr10 36463418 36464094 -109125194 + L1PA8 LINE L1 5482 6169 -3 1457 216 83 22 chr10 36464191 36464435 -109124853 - MER110A LTR ERV1 0 468 188 1981 204 91 66 chr10 36464435 36465042 -109124246 - LTR26E LTR ERV1 0 622 1 1457 216 83 22 chr10 36465042 36465204 -109124084 - MER110A LTR ERV1 -280 188 37 2336 93 0 10 chr10 36465359 36465669 -109123619 - AluY SINE Alu -4 307 1 904 181 91 19 chr10 36465889 36466099 -109123189 + MER110A LTR ERV1 1 225 -243 4791 49 3 3 chr10 36466295 36466863 -109122425 + L1PA8 LINE L1 5605 6172 0 509 289 66 16 chr10 36466922 36467164 -109122124 - MER41B LTR ERV1 -205 430 177 797 248 49 0 chr10 36467278 36467504 -109121784 + MER110A LTR ERV1 232 468 0 2394 64 0 0 chr10 36469204 36469511 -109119777 + AluY SINE Alu 1 307 0 21 0 0 0 chr10 36469813 36469834 -109119454 + AT_rich Low_complexity Low_complexity 1 21 0 260 287 28 19 chr10 36470692 36470800 -109118488 - MER110A LTR ERV1 -18 450 342 254 234 69 150 chr10 36470807 36470876 -109118412 - LTR48B LTR ERV1 -11 633 560 2173 129 3 0 chr10 36470876 36471186 -109118102 + AluSx SINE Alu 1 311 -1 1628 118 51 0 chr10 36471187 36471424 -109117864 + AluSp SINE Alu 34 282 -31 207 0 0 0 chr10 36471427 36471450 -109117838 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 254 234 69 150 chr10 36471450 36471563 -109117725 - LTR48B LTR ERV1 -86 558 471 2507 74 0 0 chr10 36471563 36471862 -109117426 - AluY SINE Alu -12 299 1 254 234 69 150 chr10 36471862 36471946 -109117342 - LTR48B LTR ERV1 -173 471 382 225 274 16 65 chr10 36472025 36472149 -109117139 - LTR48B LTR ERV1 -408 236 119 997 213 90 60 chr10 36472150 36472483 -109116805 - MER110A LTR ERV1 -125 343 1 2207 101 14 3 chr10 36472927 36473224 -109116064 + AluSp SINE Alu 1 300 -13 1813 207 114 51 chr10 36473582 36474319 -109114969 + LTR1B LTR ERV1 1 772 -13 1651 177 0 27 chr10 36474608 36474908 -109114380 + AluJb SINE Alu 1 292 -20 388 271 0 5 chr10 36475370 36475486 -109113802 + MIR SINE MIR 30 143 -65 336 24 0 0 chr10 36475654 36475695 -109113593 + (TG)n Simple_repeat Simple_repeat 2 42 0 2536 94 64 0 chr10 36476081 36476423 -109112865 - THE1B LTR MaLR 0 364 1 1950 154 0 3 chr10 36476451 36476770 -109112518 - AluSx SINE Alu 0 318 1 21 0 0 0 chr10 36476770 36476791 -109112497 + AT_rich Low_complexity Low_complexity 1 21 0 1374 165 0 25 chr10 36476800 36477036 -109112252 - AluJo SINE Alu -20 292 63 321 294 0 22 chr10 36477037 36477053 -109112235 - L1MC4 LINE L1 -1339 6703 6688 315 49 0 0 chr10 36477053 36477094 -109112194 + (CA)n Simple_repeat Simple_repeat 2 42 0 321 294 0 22 chr10 36477094 36477169 -109112119 - L1MC4 LINE L1 -1354 6688 6614 * 333 300 0 0 chr10 36477165 36477255 -109112033 + L1MC4 LINE L1 6614 6703 -1339 2202 106 0 0 chr10 36477261 36477568 -109111720 - AluSq SINE Alu 0 307 1 1228 181 0 0 chr10 36477568 36477767 -109111521 - AluJb SINE Alu -109 203 5 1553 122 30 0 chr10 36477775 36478012 -109111276 - L1PA16 LINE L1 -16 6150 5907 2287 123 0 0 chr10 36478896 36479197 -109110091 + AluSx SINE Alu 1 301 -11 270 0 0 0 chr10 36479197 36479227 -109110061 + (TC)n Simple_repeat Simple_repeat 2 31 0 243 0 0 0 chr10 36479226 36479253 -109110035 + (TA)n Simple_repeat Simple_repeat 1 27 0 * 187 304 43 0 chr10 36479379 36479448 -109109840 - MIR SINE MIR -74 188 117 2394 133 34 11 chr10 36479825 36480179 -109109109 - THE1B LTR MaLR 0 364 3 12886 80 4 4 chr10 36480183 36481762 -109107526 - THE1B-int LTR MaLR -2 1578 1 2449 130 30 22 chr10 36481762 36482123 -109107165 - THE1B LTR MaLR 0 364 1 493 169 0 0 chr10 36483660 36483737 -109105551 + L1 LINE L1 2662 2738 -3408 841 177 41 0 chr10 36483738 36483885 -109105403 + MSTD LTR MaLR 1 153 -243 27276 40 2 0 chr10 36483888 36484586 -109104702 - L1PA4 LINE L1 0 6155 5460 2207 101 7 3 chr10 36484586 36484883 -109104405 - AluY SINE Alu -13 298 1 27276 40 2 0 chr10 36484883 36488142 -109101146 - L1PA4 LINE L1 -695 5460 2224 15764 69 3 0 chr10 36488142 36490131 -109099157 - L1P LINE L1 -4006 2140 145 1315 170 26 9 chr10 36490132 36490361 -109098927 + MSTD LTR MaLR 164 396 0 3339 186 60 17 chr10 36490361 36491204 -109098084 + L1 LINE L1 2735 3614 -2532 1436 193 33 36 chr10 36491200 36491537 -109097751 + L1MA7 LINE L1 5953 6288 -3 * 216 317 143 50 chr10 36491586 36491845 -109097443 + L2 LINE L2 2974 3256 -16 1986 101 10 57 chr10 36492478 36492815 -109096473 - AluSx SINE Alu 0 323 1 1760 188 26 8 chr10 36492962 36493417 -109095871 - LTR53 LTR ERVL -1 518 9 1355 103 73 90 chr10 36493950 36494063 -109095225 - MER30 DNA MER1_type 0 230 117 1990 147 13 0 chr10 36494063 36494362 -109094926 - AluSx SINE Alu -9 303 1 1355 103 73 90 chr10 36494362 36494482 -109094806 - MER30 DNA MER1_type -113 117 1 309 252 165 0 chr10 36495745 36495848 -109093440 - MER94 DNA DNA 0 134 15 2367 85 0 3 chr10 36496681 36496976 -109092312 - AluSc SINE Alu -15 294 1 476 319 140 36 chr10 36498292 36498649 -109090639 + MLT1I LTR MaLR 1 394 -15 454 287 20 0 chr10 36499977 36500078 -109089210 + L2 LINE L2 3154 3256 -16 200 268 0 0 chr10 36500044 36500085 -109089203 + MIR SINE MIR 219 259 -3 * 2250 115 0 6 chr10 36500343 36500656 -109088632 - AluSx SINE Alu -1 311 1 405 0 0 0 chr10 36501243 36501288 -109088000 + (CA)n Simple_repeat Simple_repeat 1 45 0 400 305 145 48 chr10 36501295 36501599 -109087689 + L2 LINE L2 2745 3090 -223 1837 117 84 47 chr10 36501599 36501897 -109087391 - AluSg SINE Alu 0 310 2 400 305 145 48 chr10 36501897 36501960 -109087328 + L2 LINE L2 3090 3145 -168 280 171 0 29 chr10 36501966 36502036 -109087252 + CT-rich Low_complexity Low_complexity 2 69 0 1633 233 71 9 chr10 36502301 36502739 -109086549 - MLT1C LTR MaLR 0 467 3 1846 158 10 10 chr10 36502892 36503203 -109086085 + AluJo SINE Alu 1 311 -1 250 376 147 6 chr10 36504247 36504404 -109084884 + L3 LINE CR1 1396 1574 -3 1788 160 28 7 chr10 36504721 36505009 -109084279 + AluJo SINE Alu 5 298 -14 270 323 69 15 chr10 36506706 36506836 -109082452 + MER5B DNA MER1_type 7 143 -35 847 168 44 0 chr10 36507200 36507389 -109081899 + AluJb SINE Alu 141 335 0 1998 94 94 7 chr10 36508461 36508749 -109080539 + AluSq SINE Alu 1 313 0 2152 118 3 0 chr10 36510621 36510918 -109078370 + AluSq SINE Alu 1 298 -15 180 0 0 0 chr10 36510924 36510944 -109078344 + (CAA)n Simple_repeat Simple_repeat 2 21 0 418 225 7 196 chr10 36511114 36511283 -109078005 + MIR SINE MIR 18 117 -145 840 125 8 0 chr10 36511283 36511411 -109077877 - L1MA5A LINE L1 -3 6294 6166 418 225 7 196 chr10 36511411 36511517 -109077771 + MIR SINE MIR 117 241 -21 34 84 0 0 chr10 36511900 36511983 -109077305 + AT_rich Low_complexity Low_complexity 1 83 0 2304 106 0 3 chr10 36512132 36512443 -109076845 + AluSx SINE Alu 1 310 -2 21 0 0 0 chr10 36514151 36514172 -109075116 + AT_rich Low_complexity Low_complexity 1 21 0 610 193 62 35 chr10 36514175 36514320 -109074968 - L1MC1 LINE L1 0 6333 6185 1051 48 42 6 chr10 36515680 36515845 -109073443 + (TTTC)n Simple_repeat Simple_repeat 2 172 0 783 138 0 9 chr10 36515845 36515954 -109073334 - FLAM_C SINE Alu -22 121 14 2056 155 5 39 chr10 36516582 36516969 -109072319 - MSTA LTR MaLR 0 428 55 650 131 0 10 chr10 36516970 36517069 -109072219 + MER4A LTR ERV1 1 98 -566 1711 117 177 76 chr10 36517069 36517436 -109071852 + MER4A LTR ERV1 261 664 0 392 121 17 0 chr10 36517436 36517491 -109071797 - MSTA LTR MaLR -370 56 1 1345 90 51 11 chr10 36517762 36518073 -109071215 - THE1C LTR MaLR 0 375 1 308 306 70 25 chr10 36518101 36518385 -109070903 - L2 LINE L2 -556 2758 2462 2104 159 22 75 chr10 36518567 36518983 -109070305 - MSTD LTR MaLR 0 396 3 430 228 0 22 chr10 36519038 36519130 -109070158 - Tigger5 DNA MER2_type 0 2323 2234 263 186 0 0 chr10 36519137 36519180 -109070108 - Tigger5 DNA MER2_type -2268 55 13 368 189 14 27 chr10 36519180 36519254 -109070034 - Tigger5 DNA MER2_type 0 2323 2251 320 196 0 18 chr10 36519222 36519278 -109070010 - Tigger5 DNA MER2_type -2268 55 1 * 817 192 51 75 chr10 36521550 36521622 -109067666 - MER3 DNA MER1_type 0 209 137 1694 173 3 7 chr10 36521622 36521906 -109067382 + AluJb SINE Alu 10 292 -20 817 192 51 75 chr10 36521906 36522047 -109067241 - MER3 DNA MER1_type -72 137 1 2091 109 20 14 chr10 36522264 36522558 -109066730 + AluSx SINE Alu 1 296 -16 2346 122 48 20 chr10 36522965 36523317 -109065971 + THE1B LTR MaLR 3 364 0 1463 168 35 48 chr10 36523343 36523658 -109065630 - AluJb SINE Alu 0 312 2 354 140 18 0 chr10 36524762 36524819 -109064469 - FLAM SINE Alu -8 125 68 802 203 0 0 chr10 36524820 36524948 -109064340 + AluJ SINE Alu 2 129 -183 253 291 23 0 chr10 36524948 36525034 -109064254 - L1MC4 LINE L1 -1342 6700 6613 311 301 0 0 chr10 36525062 36525145 -109064143 - L1MC4 LINE L1 -1340 6702 6620 2215 72 4 4 chr10 36525148 36525426 -109063862 - AluSp SINE Alu -34 279 2 939 134 82 29 chr10 36525472 36525643 -109063645 + AluJ SINE Alu 132 311 -1 484 153 0 0 chr10 36525651 36525723 -109063565 - AluJ/FLAM SINE Alu -232 80 9 2371 84 7 0 chr10 36526770 36527066 -109062222 - AluSx SINE Alu -14 298 1 1752 171 3 35 chr10 36527295 36527605 -109061683 + AluJb SINE Alu 1 300 -12 285 148 2 0 chr10 36527606 36527660 -109061628 + FLAM SINE Alu 82 129 -4 236 125 62 21 chr10 36528191 36528239 -109061049 - MER5A DNA MER1_type -62 127 78 1182 74 0 0 chr10 36528242 36528390 -109060898 - THE1B LTR MaLR -214 150 3 2630 105 14 14 chr10 36528818 36529180 -109060108 - THE1B LTR MaLR -2 362 1 252 131 77 12 chr10 36530657 36530825 -109058463 + (TA)n Simple_repeat Simple_repeat 2 180 0 247 35 0 0 chr10 36530884 36530913 -109058375 - Alu SINE Alu -195 107 79 186 107 54 0 chr10 36530963 36531019 -109058269 + (TA)n Simple_repeat Simple_repeat 1 59 0 249 61 41 20 chr10 36531038 36531087 -109058201 + (TA)n Simple_repeat Simple_repeat 2 51 0 247 35 0 0 chr10 36531102 36531131 -109058157 - Alu SINE Alu -195 107 79 414 113 0 0 chr10 36531193 36531246 -109058042 - AluJ/FLAM SINE Alu -249 63 11 192 259 293 26 chr10 36531541 36531657 -109057631 + MER5B DNA MER1_type 32 178 0 2619 154 18 37 chr10 36531865 36532260 -109057028 + MSTA LTR MaLR 1 389 -39 2162 141 0 0 chr10 36532260 36532572 -109056716 - AluSx SINE Alu 0 312 1 2619 154 18 37 chr10 36532572 36532612 -109056676 + MSTA LTR MaLR 389 428 0 900 152 0 0 chr10 36532822 36532960 -109056328 - FRAM SINE Alu -7 169 32 188 325 90 54 chr10 36533278 36533444 -109055844 + L2 LINE L2 2856 3027 -245 2751 165 6 30 chr10 36534721 36534938 -109054350 + LOR1b LTR ERV1 1 222 -239 1974 124 0 4 chr10 36534938 36535213 -109054075 - AluSx SINE Alu -10 302 29 2751 165 6 30 chr10 36535213 36535467 -109053821 + LOR1b LTR ERV1 222 461 0 779 205 87 19 chr10 36538029 36538190 -109051098 + FAM SINE Alu 1 172 -3 1266 116 0 0 chr10 36538190 36538363 -109050925 + L1MA1 LINE L1 5588 5760 -544 239 114 45 23 chr10 36538399 36538437 -109050851 - L1MA1 LINE L1 -545 5757 5718 4312 64 4 13 chr10 36538437 36538986 -109050302 + L1MA1 LINE L1 5759 6302 0 391 245 10 10 chr10 36539189 36539287 -109050001 + MER91B DNA MER1_type 32 129 -61 21 0 0 0 chr10 36539388 36539409 -109049879 + AT_rich Low_complexity Low_complexity 1 21 0 242 262 167 24 chr10 36539695 36539779 -109049509 + MIR3 SINE MIR 82 177 -31 3127 217 33 33 chr10 36539941 36540639 -109048649 - L1ME1 LINE L1 -23 6537 5836 2286 137 30 35 chr10 36540639 36541005 -109048283 - THE1B LTR MaLR 0 364 1 3127 217 33 33 chr10 36541005 36541651 -109047637 - L1ME1 LINE L1 -724 5836 5192 1337 239 87 9 chr10 36541640 36542068 -109047220 - L1ME1 LINE L1 -3626 2914 2455 * 432 277 10 0 chr10 36542109 36542210 -109047078 - L2 LINE L2 -36 3277 3176 3250 233 128 62 chr10 36542278 36543431 -109045857 - L1ME1 LINE L1 -5172 1371 142 414 256 31 0 chr10 36543433 36543562 -109045726 - L1MEc LINE L1 -4243 2153 2021 490 116 0 45 chr10 36543562 36543674 -109045614 + (TA)n Simple_repeat Simple_repeat 2 108 0 2269 76 0 7 chr10 36543674 36543986 -109045302 - AluSp SINE Alu 0 313 1 1981 254 67 24 chr10 36543986 36545791 -109043497 - L1MEc LINE L1 -4379 2017 113 * 4933 131 46 50 chr10 36545773 36546093 -109043195 - L1PA16 LINE L1 -3 6163 5843 1949 119 48 7 chr10 36546093 36546386 -109042902 + AluSq SINE Alu 1 305 -8 4933 131 46 50 chr10 36546386 36546638 -109042650 - L1PA16 LINE L1 -323 5843 5592 2139 116 7 0 chr10 36546638 36546930 -109042358 - AluSg SINE Alu -16 294 1 4933 131 46 50 chr10 36546930 36547264 -109042024 - L1PA16 LINE L1 -574 5592 5259 3029 84 17 0 chr10 36547238 36547643 -109041645 - L1PA10 LINE L1 -5 6163 5752 * 667 194 0 0 chr10 36547643 36547777 -109041511 + L1 LINE L1 5179 5312 -834 205 262 8 87 chr10 36547809 36547935 -109041353 - L2 LINE L2 -729 2585 2470 4651 218 14 8 chr10 36547991 36549027 -109040261 - L1PA16 LINE L1 -860 5286 4244 3786 139 4 0 chr10 36549893 36550418 -109038870 - MER1A DNA MER1_type 0 527 1 2121 124 0 3 chr10 36550486 36550776 -109038512 + AluSx SINE Alu 1 289 -23 1043 308 35 20 chr10 36551535 36551986 -109037302 + L1MC4a LINE L1 5533 5990 -1818 1701 180 31 0 chr10 36551996 36552285 -109037003 + AluJo SINE Alu 1 298 -14 31 68 0 0 chr10 36552402 36552461 -109036827 + AT_rich Low_complexity Low_complexity 1 59 0 1461 161 43 8 chr10 36553373 36553628 -109035660 + AluJb SINE Alu 28 291 -21 2579 188 128 67 chr10 36554422 36555200 -109034088 - LTR1B LTR ERV1 0 826 1 2196 249 4 8 chr10 36555492 36555977 -109033311 - MER21B LTR ERV1 -369 494 12 851 184 168 26 chr10 36556083 36556273 -109033015 - MER21B-int LTR ERV1 -52 4139 3923 1047 240 80 47 chr10 36556273 36556635 -109032653 - LTR40c LTR ERVL -58 407 34 3315 155 13 35 chr10 36556701 36557107 -109032181 - LTR26B LTR ERV1 0 531 135 2187 116 0 7 chr10 36557107 36557429 -109031859 + AluSq SINE Alu 1 320 0 3315 155 13 35 chr10 36557429 36557562 -109031726 - LTR26B LTR ERV1 -396 135 1 506 254 169 5 chr10 36557676 36557865 -109031423 - MIR SINE MIR -17 245 26 4770 79 55 43 chr10 36558164 36558363 -109030925 + L1MA2 LINE L1 5573 5768 -536 2318 134 61 3 chr10 36558363 36558707 -109030581 + THE1B LTR MaLR 1 364 0 4770 79 55 43 chr10 36558707 36559230 -109030058 + L1MA2 LINE L1 5768 6304 0 1878 207 158 58 chr10 36559846 36560563 -109028725 + LTR1B LTR ERV1 1 980 -40 267 0 29 0 chr10 36560968 36561002 -109028286 + (TTTTA)n Simple_repeat Simple_repeat 1 70 0 1480 154 61 65 chr10 36561002 36561165 -109028123 - AluJo SINE Alu -1 315 119 186 103 0 0 chr10 36561165 36561194 -109028094 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 1480 154 61 65 chr10 36561194 36561309 -109027979 - AluJo SINE Alu -197 119 5 2027 128 3 3 chr10 36561627 36561915 -109027373 - AluSx SINE Alu -24 288 1 21 0 0 0 chr10 36562235 36562256 -109027032 + AT_rich Low_complexity Low_complexity 1 21 0 580 246 31 52 chr10 36562551 36562742 -109026546 + MIR3 SINE MIR 19 205 -3 2813 130 9 7 chr10 36563077 36563508 -109025780 + L1MA3 LINE L1 5874 6305 0 1155 203 60 18 chr10 36566158 36566437 -109022851 - MER58B DNA MER1_type -9 332 1 2343 163 69 12 chr10 36566472 36566877 -109022411 - MSTC LTR MaLR 0 428 1 582 54 0 0 chr10 36567508 36567582 -109021706 + (TTCC)n Simple_repeat Simple_repeat 3 76 0 1891 138 22 0 chr10 36567585 36567860 -109021428 - AluSq SINE Alu -32 281 1 184 333 120 19 chr10 36568013 36568121 -109021167 - MER5A DNA MER1_type -31 158 40 370 268 49 32 chr10 36568261 36568372 -109020916 + MIR SINE MIR 9 124 -138 4812 65 2 0 chr10 36568372 36568925 -109020363 + MER41A LTR ERV1 1 554 0 370 268 49 32 chr10 36568925 36568936 -109020352 + MIR SINE MIR 124 133 -129 571 130 30 0 chr10 36569576 36569669 -109019619 - L1PB1 LINE L1 -694 5457 5359 5189 97 21 8 chr10 36569669 36570024 -109019264 + L1PB1 LINE L1 5429 5778 -373 363 44 0 0 chr10 36570024 36570069 -109019219 + (CA)n Simple_repeat Simple_repeat 2 46 0 5189 97 21 8 chr10 36570069 36570422 -109018866 + L1PB1 LINE L1 5778 6147 -4 571 130 30 0 chr10 36570422 36570467 -109018821 - L1P5 LINE L1 -792 5359 5317 763 172 29 77 chr10 36570571 36570780 -109018508 + MER106A DNA MER1_type 35 233 -3 2162 117 0 10 chr10 36572495 36572794 -109016494 + AluSg SINE Alu 1 296 -14 234 0 0 0 chr10 36572978 36573004 -109016284 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 648 242 12 36 chr10 36576331 36576496 -109012792 - MER45A DNA AcHobo -2 176 16 2315 141 21 50 chr10 36576982 36577228 -109012060 - L1MA4A LINE L1 -7 6296 6065 1688 149 0 57 chr10 36577228 36577529 -109011759 + AluJo SINE Alu 11 294 -18 2315 141 21 50 chr10 36577529 36577702 -109011586 - L1MA4A LINE L1 -238 6065 5889 505 182 30 20 chr10 36577955 36578054 -109011234 + LTR24B LTR ERV1 4 103 -473 1572 55 92 37 chr10 36578110 36578328 -109010960 + MER30 DNA MER1_type 1 230 0 672 279 46 14 chr10 36578367 36578682 -109010606 + LTR24B LTR ERV1 145 569 0 2156 136 0 0 chr10 36579308 36579610 -109009678 + AluSx SINE Alu 1 302 -10 253 307 36 44 chr10 36580270 36580407 -109008881 + L3 LINE CR1 1416 1551 -26 215 196 39 0 chr10 36580410 36580461 -109008827 + GA-rich Low_complexity Low_complexity 2 54 0 26 30 0 0 chr10 36580659 36580692 -109008596 + AT_rich Low_complexity Low_complexity 1 33 0 717 275 48 70 chr10 36581144 36581515 -109007773 + L1ME4a LINE L1 5560 5922 -199 248 324 157 0 chr10 36581574 36581682 -109007606 + L2 LINE L2 3148 3272 0 3440 110 46 24 chr10 36581835 36582335 -109006953 - MER9 LTR ERVK 0 511 1 27 0 0 0 chr10 36582869 36582896 -109006392 + AT_rich Low_complexity Low_complexity 1 27 0 3007 83 3 0 chr10 36583133 36583496 -109005792 - THE1B LTR MaLR 0 364 1 237 222 74 49 chr10 36584675 36584756 -109004532 + MIR SINE MIR 19 101 -107 696 266 47 10 chr10 36584803 36584995 -109004293 + MIR SINE MIR 64 262 0 231 301 60 24 chr10 36585016 36585099 -109004189 + MIR3 SINE MIR 114 199 -9 1560 180 54 0 chr10 36585138 36585293 -109003995 - AluJo SINE Alu -19 293 148 189 0 0 0 chr10 36585293 36585314 -109003974 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 1560 180 54 0 chr10 36585314 36585436 -109003852 - AluJo SINE Alu -164 148 1 2054 123 7 14 chr10 36585520 36585813 -109003475 + AluSx SINE Alu 1 291 -21 813 207 86 94 chr10 36586627 36586942 -109002346 - L2 LINE L2 -239 3074 2758 1046 219 13 26 chr10 36586951 36587030 -109002258 + AluJo SINE Alu 61 140 -172 2115 111 4 0 chr10 36587030 36587332 -109001956 + AluSc SINE Alu 1 303 0 1046 219 13 26 chr10 36587332 36587484 -109001804 + AluJo SINE Alu 140 290 -22 775 143 0 0 chr10 36587510 36587615 -109001673 - AluJo SINE Alu -44 268 164 751 173 0 0 chr10 36587623 36587733 -109001555 - AluJo SINE Alu -201 111 2 2234 287 95 35 chr10 36587740 36588902 -109000386 - L2 LINE L2 -568 2746 1516 2387 74 7 3 chr10 36589676 36589972 -108999316 + AluY SINE Alu 1 297 -14 2431 103 0 0 chr10 36590015 36590327 -108998961 - AluSq SINE Alu -1 312 1 561 297 73 82 chr10 36591056 36591631 -108997657 - L1ME4a LINE L1 -223 5898 5329 487 303 123 23 chr10 36592180 36592530 -108996758 - MLT1I LTR MaLR 0 409 25 6035 102 9 14 chr10 36592563 36593451 -108995837 - L1PB1 LINE L1 -1 6150 5267 227 384 42 5 chr10 36593816 36594032 -108995256 - L1ME4a LINE L1 -1178 4968 4745 2129 125 3 10 chr10 36594069 36594374 -108994914 - AluSx SINE Alu -9 303 1 364 349 99 54 chr10 36594629 36595032 -108994256 - L2 LINE L2 -229 3043 2627 1762 91 9 0 chr10 36595034 36595264 -108994024 - Charlie3 DNA MER1_type -5 2705 2474 1565 119 0 0 chr10 36595349 36595551 -108993737 - AluSg/x SINE Alu -16 294 93 186 43 0 0 chr10 36595705 36595728 -108993560 + (TC)n Simple_repeat Simple_repeat 2 24 0 2191 118 0 3 chr10 36595728 36596024 -108993264 - AluSx SINE Alu -17 295 1 409 265 60 13 chr10 36596215 36596366 -108992922 + MER103 DNA DNA 3 160 -6 14713 113 72 34 chr10 36596367 36597262 -108992026 - Tigger1 DNA MER2_type 0 2418 1559 2519 57 3 0 chr10 36597262 36597563 -108991725 - AluY SINE Alu -9 302 1 14713 113 72 34 chr10 36597563 36598406 -108990882 - Tigger1 DNA MER2_type -859 1559 750 2370 86 0 7 chr10 36598406 36598710 -108990578 - AluY SINE Alu -9 302 1 14713 113 72 34 chr10 36598710 36599037 -108990251 - Tigger1 DNA MER2_type -1668 750 437 2069 121 7 0 chr10 36599037 36599326 -108989962 + AluSx SINE Alu 5 295 -17 14713 113 72 34 chr10 36599326 36599585 -108989703 - Tigger1 DNA MER2_type -1981 437 3 729 198 0 0 chr10 36599611 36599732 -108989556 + FRAM SINE Alu 46 166 -10 210 316 44 21 chr10 36601013 36601113 -108988175 - MIR SINE MIR -63 145 45 1885 173 0 3 chr10 36601289 36601601 -108987687 + AluSx SINE Alu 1 311 -1 21 0 0 0 chr10 36602163 36602184 -108987104 + AT_rich Low_complexity Low_complexity 1 21 0 860 86 13 26 chr10 36602901 36603052 -108986236 + (TTTC)n Simple_repeat Simple_repeat 2 150 0 243 276 0 0 chr10 36603565 36603623 -108985665 + L2 LINE L2 3247 3304 -9 1435 226 77 24 chr10 36603750 36604245 -108985043 - L1ME4a LINE L1 -3 6118 5598 2118 134 0 0 chr10 36604440 36604738 -108984550 + AluSx SINE Alu 1 298 -14 190 256 37 37 chr10 36604754 36604836 -108984452 + MIR SINE MIR 31 112 -150 894 276 105 44 chr10 36604874 36605099 -108984189 + MLT1J LTR MaLR 5 215 -296 2629 120 38 31 chr10 36605099 36605524 -108983764 + MSTA LTR MaLR 1 428 0 894 276 105 44 chr10 36605524 36605773 -108983515 + MLT1J LTR MaLR 215 508 -3 180 0 0 0 chr10 36606754 36606774 -108982514 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2104 131 0 0 chr10 36606777 36607060 -108982228 - AluSq SINE Alu -30 283 1 297 324 122 19 chr10 36608042 36608255 -108981033 + L2 LINE L2 1721 1955 -1359 3961 186 19 23 chr10 36608317 36609109 -108980179 - L1MB8 LINE L1 -6 6172 5384 864 258 22 0 chr10 36609111 36609386 -108979902 - L1MB8 LINE L1 -844 5302 5022 245 241 0 0 chr10 36609436 36609494 -108979794 + L1M4 LINE L1 5022 5079 -1067 400 210 0 0 chr10 36609498 36609579 -108979709 - L1MB8 LINE L1 -1125 5021 4941 1474 59 21 0 chr10 36610000 36610186 -108979102 + L1MA1 LINE L1 6112 6301 -1 247 327 39 10 chr10 36610511 36610615 -108978673 - L2 LINE L2 -1 3312 3206 1489 193 37 20 chr10 36612442 36612615 -108976673 - AluJo SINE Alu -12 300 118 208 0 0 59 chr10 36612615 36612649 -108976639 + (TTA)n Simple_repeat Simple_repeat 2 33 0 1489 193 37 20 chr10 36612649 36612770 -108976518 - AluJo SINE Alu -194 118 1 195 129 0 0 chr10 36617480 36617511 -108971777 + (TG)n Simple_repeat Simple_repeat 2 32 0 4369 148 91 3 chr10 36618486 36619245 -108970043 - LTR1B LTR ERV1 0 826 1 1978 126 0 0 chr10 36621454 36621724 -108967564 - AluSg SINE Alu -2 308 39 1926 165 0 16 chr10 36621738 36622053 -108967235 - AluJo SINE Alu -2 310 1 2423 92 0 7 chr10 36623285 36623589 -108965699 - AluSg SINE Alu -8 302 1 2557 69 0 0 chr10 36623615 36623919 -108965369 + AluY SINE Alu 1 304 -7 355 305 86 13 chr10 36624001 36624152 -108965136 + MIR SINE MIR 77 238 -24 3921 57 38 6 chr10 36625182 36625687 -108963601 - L1PA8 LINE L1 0 6172 5652 369 109 0 0 chr10 36625792 36625847 -108963441 + (CA)n Simple_repeat Simple_repeat 2 56 0 324 173 49 0 chr10 36626155 36626236 -108963052 + L1MB4 LINE L1 6095 6179 -1 3898 192 31 14 chr10 36626366 36627136 -108962152 - LTR39 LTR ERV1 0 783 1 666 214 0 7 chr10 36627528 36627803 -108961485 + (TCCA)n Simple_repeat Simple_repeat 1 272 0 1401 184 74 13 chr10 36627832 36628131 -108961157 + LTR52 LTR ERVL 102 418 -3 397 307 21 37 chr10 36628624 36628813 -108960475 - MLT1K LTR MaLR 0 588 403 841 181 0 0 chr10 36629091 36629224 -108960064 + FLAM_A SINE Alu 1 133 0 2737 114 13 37 chr10 36629728 36629944 -108959344 + L1MA4A LINE L1 5854 6074 -229 2244 129 0 0 chr10 36629944 36630253 -108959035 - AluSx SINE Alu -3 309 1 2737 114 13 37 chr10 36630253 36630490 -108958798 + L1MA4A LINE L1 6074 6296 -7 1372 168 6 128 chr10 36630512 36630839 -108958449 + AluJb SINE Alu 1 287 -15 2442 118 34 34 chr10 36632492 36632692 -108956596 - L1MA8 LINE L1 -5 6286 6087 2366 86 7 0 chr10 36632692 36632993 -108956295 - AluSx SINE Alu -5 307 5 2442 118 34 34 chr10 36632993 36633231 -108956057 - L1MA8 LINE L1 -203 6088 5848 2165 136 33 25 chr10 36633297 36633658 -108955630 - THE1B LTR MaLR 0 364 1 307 163 5 0 chr10 36633831 36633892 -108955396 + MIR SINE MIR 97 160 -48 2342 89 0 3 chr10 36633979 36634283 -108955005 + AluY SINE Alu 1 303 -8 2658 190 17 0 chr10 36634598 36635071 -108954217 + MLT2B1 LTR ERVL 1 481 -39 1064 160 5 5 chr10 36635071 36635258 -108954030 + MLT1A1 LTR MaLR 1 187 -178 3909 124 71 57 chr10 36635259 36635408 -108953880 - MER50 LTR ERV1 -23 711 566 1424 202 10 24 chr10 36635408 36635546 -108953742 + AluJb SINE Alu 1 139 -175 429 36 0 0 chr10 36635546 36635601 -108953687 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 1424 202 10 24 chr10 36635601 36635780 -108953508 + AluJb SINE Alu 139 314 0 3909 124 71 57 chr10 36635780 36636328 -108952960 - MER50 LTR ERV1 -168 566 1 987 192 16 22 chr10 36636329 36636511 -108952777 + MLT1A1 LTR MaLR 185 365 0 187 205 27 152 chr10 36636586 36636646 -108952642 + MIR SINE MIR 42 83 -179 2012 139 14 0 chr10 36636646 36636941 -108952347 - AluSg SINE Alu -11 299 1 187 205 27 152 chr10 36636941 36636992 -108952296 + MIR SINE MIR 83 139 -123 2132 125 6 10 chr10 36637003 36637315 -108951973 - AluSq SINE Alu -2 311 1 2276 214 91 12 chr10 36638951 36639548 -108949740 - LTR48B LTR ERV1 0 644 1 246 279 15 15 chr10 36640129 36640197 -108949091 + tRNA-Ile-ATT tRNA tRNA 5 72 -5 258 32 0 0 chr10 36640821 36640852 -108948436 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 2011 151 0 0 chr10 36640855 36641139 -108948149 - AluSx SINE Alu -28 284 1 1812 169 0 10 chr10 36641179 36641480 -108947808 - AluJb SINE Alu -14 298 1 6684 55 0 81 chr10 36641523 36642955 -108946333 + L1PA7 LINE L1 4800 6153 -1 1563 147 74 53 chr10 36644252 36644391 -108944897 + LTR8A LTR ERV1 1 136 -591 413 76 15 0 chr10 36644391 36644457 -108944831 + (TA)n Simple_repeat Simple_repeat 2 68 0 2046 140 7 0 chr10 36644457 36644742 -108944546 - AluSx SINE Alu -23 289 3 2168 124 0 3 chr10 36644748 36645046 -108944242 - AluSq SINE Alu -16 297 1 1563 147 74 53 chr10 36645046 36645532 -108943756 + LTR8A LTR ERV1 140 727 0 25 31 0 0 chr10 36645704 36645736 -108943552 + AT_rich Low_complexity Low_complexity 1 32 0 211 357 24 0 chr10 36645756 36645840 -108943448 + MIR3 SINE MIR 114 199 -9 2356 106 0 6 chr10 36646048 36646359 -108942929 - AluSx SINE Alu -3 309 1 401 149 0 0 chr10 36646367 36646434 -108942854 - Alu SINE Alu -2 309 243 1067 139 0 30 chr10 36646446 36646811 -108942477 + (GAAA)n Simple_repeat Simple_repeat 2 355 0 2059 148 0 7 chr10 36646886 36647191 -108942097 + AluJb SINE Alu 1 303 -9 5791 117 16 27 chr10 36648047 36648960 -108940328 + MER4D LTR ERV1 1 903 0 2404 99 0 3 chr10 36649010 36649322 -108939966 + AluSq SINE Alu 1 311 -2 391 227 6 6 chr10 36649632 36649808 -108939480 + CT-rich Low_complexity Low_complexity 2 177 0 255 305 0 0 chr10 36649809 36649868 -108939420 + polypyrimidine Low_complexity Low_complexity 4 62 0 570 234 0 0 chr10 36649869 36650044 -108939244 + CT-rich Low_complexity Low_complexity 2 176 0 1670 193 10 7 chr10 36650604 36650894 -108938394 - AluJo SINE Alu -21 291 1 680 240 72 87 chr10 36651288 36651634 -108937654 + MER102b DNA MER1_type 1 341 0 1315 162 121 62 chr10 36651728 36652000 -108937288 + AluJo SINE Alu 5 292 -20 299 290 130 0 chr10 36652287 36652387 -108936901 - MER117 DNA MER1_type -51 146 34 2424 90 0 0 chr10 36653411 36653710 -108935578 + AluSq SINE Alu 1 299 -14 1884 94 0 42 chr10 36654076 36654199 -108935089 + L1MA1 LINE L1 6027 6154 -148 1523 96 50 5 chr10 36654199 36654418 -108934870 + MER30 DNA MER1_type 2 230 0 1884 94 0 42 chr10 36654418 36654582 -108934706 + L1MA1 LINE L1 6154 6302 0 27 0 0 0 chr10 36654582 36654609 -108934679 + AT_rich Low_complexity Low_complexity 1 27 0 285 29 0 0 chr10 36655048 36655082 -108934206 + (CA)n Simple_repeat Simple_repeat 1 34 0 242 108 27 0 chr10 36655779 36655816 -108933472 + Alu SINE Alu 265 302 -18 216 0 0 0 chr10 36656384 36656408 -108932880 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1388 202 49 0 chr10 36656412 36656560 -108932728 - AluJo SINE Alu -32 280 141 180 111 0 0 chr10 36656560 36656587 -108932701 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1388 202 49 0 chr10 36656587 36656705 -108932583 - AluJo SINE Alu -171 141 1 180 111 0 0 chr10 36656708 36656735 -108932553 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 653 148 9 0 chr10 36656741 36656849 -108932439 - FLAM_A SINE Alu -30 112 4 332 179 60 12 chr10 36657179 36657263 -108932025 + MLT2B3 LTR ERVL 6 93 -461 1934 183 55 103 chr10 36657300 36657841 -108931447 + MLT2B1 LTR ERVL 6 520 0 3148 98 18 16 chr10 36657908 36658358 -108930930 - L1PA11 LINE L1 -2 6172 5722 245 333 11 11 chr10 36658363 36658456 -108930832 - MIR SINE MIR -123 139 47 183 205 0 0 chr10 36659568 36659607 -108929681 + (CA)n Simple_repeat Simple_repeat 2 40 0 2186 110 0 19 chr10 36659680 36659988 -108929300 - AluSx SINE Alu -10 302 1 21 71 0 0 chr10 36660215 36660257 -108929031 + AT_rich Low_complexity Low_complexity 1 42 0 239 221 215 105 chr10 36661657 36661982 -108927306 + MLT1K LTR MaLR 219 579 -9 1271 237 127 29 chr10 36662575 36662992 -108926296 + MLT1J LTR MaLR 1 458 -53 225 0 0 0 chr10 36662992 36663017 -108926271 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 798 217 0 0 chr10 36663019 36663162 -108926126 - FRAM SINE Alu -30 146 4 2106 110 0 10 chr10 36663563 36663864 -108925424 - AluSx SINE Alu -14 298 1 428 265 47 77 chr10 36664509 36664568 -108924720 + MIR SINE MIR 41 100 -162 1698 138 0 55 chr10 36664568 36664880 -108924408 - AluSx SINE Alu -17 295 1 428 265 47 77 chr10 36664880 36664990 -108924298 + MIR SINE MIR 100 205 -57 1367 203 13 16 chr10 36664998 36665303 -108923985 + AluJb SINE Alu 1 304 -8 1526 174 3 20 chr10 36666424 36666718 -108922570 - AluJb SINE Alu -23 289 1 978 130 0 25 chr10 36666806 36666967 -108922321 + FRAM SINE Alu 16 172 -4 236 180 80 0 chr10 36668394 36668444 -108920844 + L2 LINE L2 3251 3304 -9 695 221 158 57 chr10 36668929 36669227 -108920061 + MER57A LTR ERV1 59 386 -17 601 194 0 57 chr10 36669228 36669352 -108919936 + FLAM_C SINE Alu 15 131 -12 1725 168 13 3 chr10 36669838 36670147 -108919141 - AluJo SINE Alu 0 312 1 8937 111 168 68 chr10 36671369 36673178 -108916110 + pTR5 LTR ERV1 504 2438 0 705 199 0 15 chr10 36673198 36673329 -108915959 - FLAM_C SINE Alu -2 131 3 1723 162 17 7 chr10 36673335 36673625 -108915663 - AluJb SINE Alu -19 293 1 1933 131 7 3 chr10 36673629 36673927 -108915361 - AluSq SINE Alu -14 299 1 369 329 41 20 chr10 36674053 36674199 -108915089 - MER5A DNA MER1_type -1 188 40 * 605 259 6 19 chr10 36674069 36674227 -108915061 + MER5A DNA MER1_type 34 189 0 203 146 0 42 chr10 36674279 36674327 -108914961 + (TAAAAA)n Simple_repeat Simple_repeat 3 48 0 2199 108 0 9 chr10 36674541 36674856 -108914432 - AluSx SINE Alu 0 312 1 377 248 26 26 chr10 36675004 36675121 -108914167 + L1MC4 LINE L1 7783 7899 -143 216 184 0 0 chr10 36675144 36675193 -108914095 + (CATATA)n Simple_repeat Simple_repeat 3 51 0 1251 195 96 22 chr10 36675239 36675511 -108913777 + AluJo SINE Alu 1 292 -10 901 127 15 0 chr10 36675545 36675679 -108913609 + FRAM SINE Alu 25 160 -16 22 0 0 0 chr10 36675747 36675769 -108913519 + AT_rich Low_complexity Low_complexity 1 22 0 2064 115 0 25 chr10 36676004 36676318 -108912970 - AluSg SINE Alu -4 306 1 1609 201 161 11 chr10 36677239 36677521 -108911767 + MLT1D LTR MaLR 3 241 -264 2154 92 16 3 chr10 36677521 36677827 -108911461 + AluSq SINE Alu 1 310 -3 1609 201 161 11 chr10 36677827 36677978 -108911310 + MLT1D LTR MaLR 241 501 -4 1641 181 0 7 chr10 36678060 36678342 -108910946 + AluJo SINE Alu 17 296 -16 1976 128 0 10 chr10 36678773 36679086 -108910202 + AluSx SINE Alu 1 310 -2 1622 170 0 17 chr10 36679113 36679424 -108909864 + AluJb SINE Alu 1 306 0 193 145 116 58 chr10 36679829 36679898 -108909390 - L2 LINE L2 -76 3237 3165 1525 180 0 37 chr10 36680307 36680630 -108908658 - AluJo SINE Alu -1 311 1 1592 142 66 10 chr10 36680956 36681245 -108908043 + AluSx SINE Alu 1 305 -7 5667 77 21 12 chr10 36681593 36682371 -108906917 - L1PA10 LINE L1 -11 6157 5373 812 131 29 7 chr10 36685973 36686110 -108903178 + L1MA3 LINE L1 6166 6305 0 2066 111 6 43 chr10 36687145 36687469 -108901819 + AluSq SINE Alu 1 312 -1 858 82 7 7 chr10 36687635 36687770 -108901518 + (TTGG)n Simple_repeat Simple_repeat 1 135 0 190 200 55 9 chr10 36688512 36688622 -108900666 + (CAAA)n Simple_repeat Simple_repeat 1 115 0 2677 215 199 75 chr10 36688622 36689141 -108900147 + L1MC4 LINE L1 6487 6940 -1102 2465 135 28 21 chr10 36689141 36689564 -108899724 + MSTA LTR MaLR 1 426 -2 2677 215 199 75 chr10 36689564 36690131 -108899157 + L1MC4 LINE L1 6940 7435 -607 4156 70 4 6 chr10 36690131 36690673 -108898615 - L1PA6 LINE L1 -2 6152 5612 2677 215 199 75 chr10 36690673 36690780 -108898508 + L1MC4 LINE L1 7435 7527 -515 1704 139 0 7 chr10 36690780 36691089 -108898199 + AluJo SINE Alu 5 311 0 2677 215 199 75 chr10 36691089 36691162 -108898126 + L1MC4 LINE L1 7527 7914 -128 302 219 8 118 chr10 36691662 36691781 -108897507 - MIR SINE MIR -77 185 80 832 149 52 8 chr10 36691791 36691925 -108897363 + AluJo SINE Alu 14 153 -159 4202 118 190 131 chr10 36691925 36693215 -108896073 + pTR5 LTR ERV1 743 2438 0 694 177 0 23 chr10 36693229 36693359 -108895929 + FRAM SINE Alu 42 168 -8 1462 168 0 30 chr10 36693887 36694184 -108895104 - AluJo SINE Alu -24 288 1 321 315 0 0 chr10 36694596 36694685 -108894603 - L2 LINE L2 0 3272 3184 1706 85 31 0 chr10 36695112 36695335 -108893953 - MER30 DNA MER1_type 0 230 1 1889 156 17 0 chr10 36696088 36696390 -108892898 + AluSx SINE Alu 5 311 -1 526 195 141 16 chr10 36696431 36696592 -108892696 - MER5A DNA MER1_type -1 188 5 2095 125 0 7 chr10 36696985 36697289 -108891999 - AluSx SINE Alu -10 302 1 208 0 62 0 chr10 36697586 36697618 -108891670 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 864 127 0 0 chr10 36697622 36697740 -108891548 - FLAM_C SINE Alu -15 118 1 523 251 147 25 chr10 36698060 36698223 -108891065 + MER5A DNA MER1_type 7 189 0 344 272 141 28 chr10 36699145 36699358 -108889930 + L1MEd LINE L1 659 895 -5310 487 281 100 40 chr10 36699394 36699652 -108889636 + L1MEd LINE L1 1139 1380 -5016 5117 55 3 6 chr10 36699652 36700293 -108888995 + L1PA7 LINE L1 5515 6153 -1 487 281 100 40 chr10 36700293 36700515 -108888773 + L1MEd LINE L1 1380 1648 -4748 328 202 202 10 chr10 36700668 36700767 -108888521 - MER5C DNA MER1_type -200 124 7 191 375 48 30 chr10 36701751 36701919 -108887369 - L3 LINE CR1 -1 1576 1406 2047 134 38 41 chr10 36701947 36702312 -108886976 + THE1B LTR MaLR 1 364 0 2001 121 0 30 chr10 36703031 36703336 -108885952 + AluSq SINE Alu 11 306 -7 1256 213 3 38 chr10 36703558 36703873 -108885415 - AluJo SINE Alu -8 304 1 36034 101 15 14 chr10 36704107 36710252 -108879036 + L1PA7 LINE L1 11 6154 0 1807 162 23 3 chr10 36710265 36710568 -108878720 + AluJb SINE Alu 1 309 -3 306 348 118 6 chr10 36710568 36710746 -108878542 + HAL1 LINE L1 1104 1301 -1206 519 280 136 36 chr10 36711514 36711955 -108877333 + MLT1J LTR MaLR 6 510 -1 1656 179 0 13 chr10 36712829 36713131 -108876157 + AluJb SINE Alu 12 309 -3 2096 133 23 15 chr10 36713134 36713493 -108875795 + MLT1A1 LTR MaLR 1 363 -2 287 297 22 0 chr10 36713505 36713596 -108875692 - MLT1L LTR MaLR -49 566 474 443 129 0 0 chr10 36714180 36714242 -108875046 + AluS SINE Alu 5 66 -247 338 129 94 47 chr10 36714392 36714477 -108874811 + LTR67 LTR ERVL 462 550 -7 233 316 79 0 chr10 36716329 36716405 -108872883 + L2 LINE L2 3191 3272 -41 836 135 38 8 chr10 36716791 36716924 -108872364 + AluSg/x SINE Alu 103 239 -73 1737 213 54 26 chr10 36719068 36719335 -108869953 + L1ME2 LINE L1 5504 5791 -373 1997 132 0 0 chr10 36719335 36719648 -108869640 + AluSx SINE Alu 1 313 0 1737 213 54 26 chr10 36719648 36719801 -108869487 + L1ME2 LINE L1 5791 5938 -226 801 156 39 0 chr10 36719806 36719934 -108869354 + AluJo SINE Alu 2 134 -178 27 68 0 14 chr10 36719934 36719962 -108869326 + AT_rich Low_complexity Low_complexity 1 28 -44 1685 80 0 9 chr10 36719962 36720188 -108869100 + L1PA8 LINE L1 5948 6171 -1 27 68 0 14 chr10 36720188 36720232 -108869056 + AT_rich Low_complexity Low_complexity 28 72 0 639 260 19 18 chr10 36720232 36720481 -108868807 + L1MA10 LINE L1 5922 6327 -5 289 312 83 70 chr10 36720496 36720797 -108868491 + L2 LINE L2 2968 3272 0 1761 130 0 14 chr10 36720813 36721097 -108868191 + L1PA14 LINE L1 5882 6161 0 695 68 0 10 chr10 36721182 36721285 -108868003 + (TGGA)n Simple_repeat Simple_repeat 4 105 0 1913 134 16 22 chr10 36722793 36723285 -108866003 + AluSx SINE Alu 1 312 0 254 194 16 0 chr10 36723287 36723349 -108865939 + GA-rich Low_complexity Low_complexity 1 63 0 388 228 168 0 chr10 36723351 36723452 -108865836 - MER69A DNA AcHobo -59 118 1 885 240 70 25 chr10 36723999 36724224 -108865064 + MIR SINE MIR 10 248 -14 2360 39 0 36 chr10 36724224 36724531 -108864757 - AluY SINE Alu -15 296 1 885 240 70 25 chr10 36724531 36724547 -108864741 + MIR SINE MIR 248 262 0 1781 119 0 84 chr10 36724849 36725169 -108864119 + AluSx SINE Alu 1 293 -19 288 288 120 16 chr10 36725406 36725531 -108863757 + MIR SINE MIR 92 229 -33 506 130 0 0 chr10 36726343 36726412 -108862876 + AluS SINE Alu 6 74 -238 2106 88 3 22 chr10 36726433 36726750 -108862538 + AluY SINE Alu 1 311 0 2343 86 0 0 chr10 36728105 36728409 -108860879 - AluSx SINE Alu -8 304 1 769 273 36 5 chr10 36728442 36728636 -108860652 - MIR SINE MIR -62 200 1 274 56 0 0 chr10 36729288 36729324 -108859964 - L2 LINE L2 -4 3309 3274 4564 237 48 79 chr10 36730923 36733337 -108855951 + L1M3a LINE L1 251 2739 -3295 2269 80 0 3 chr10 36733337 36733637 -108855651 + AluY SINE Alu 1 299 -12 4564 237 48 79 chr10 36733637 36734572 -108854716 + L1M3a LINE L1 2739 3240 -2794 1125 166 80 140 chr10 36734572 36734921 -108854367 - MER7A DNA MER2_type -20 326 1 4564 237 48 79 chr10 36734921 36735580 -108853708 + L1M3a LINE L1 3240 3918 -2116 227 224 94 12 chr10 36735616 36735701 -108853587 - LTR43 LTR ERV1 -20 582 491 1152 226 55 43 chr10 36735793 36736120 -108853168 - LTR43 LTR ERV1 -140 462 132 283 162 44 15 chr10 36736229 36736297 -108852991 - LTR60 LTR ERV1 -516 70 1 888 149 0 19 chr10 36736297 36736451 -108852837 + L1M3a LINE L1 3957 4107 -1927 1062 164 11 11 chr10 36736451 36736634 -108852654 - LTR45B LTR ERV1 -272 217 35 261 57 0 0 chr10 36736688 36736723 -108852565 + (CA)n Simple_repeat Simple_repeat 2 36 0 546 280 69 34 chr10 36736723 36737101 -108852187 - L1ME4a LINE L1 -157 5964 5574 1572 170 72 0 chr10 36737161 36737438 -108851850 - AluJo SINE Alu -15 297 1 811 119 17 0 chr10 36737614 36737732 -108851556 - AluJb SINE Alu -191 121 2 206 271 0 34 chr10 36737738 36737797 -108851491 + L2 LINE L2 3186 3242 -30 201 74 0 0 chr10 36737799 36737826 -108851462 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 445 321 134 34 chr10 36738145 36738622 -108850666 + L2 LINE L2 390 914 -2400 264 59 0 0 chr10 36738766 36738800 -108850488 + (TGAA)n Simple_repeat Simple_repeat 4 37 0 47 47 0 12 chr10 36740307 36740373 -108848915 + AT_rich Low_complexity Low_complexity 1 67 -18 1907 131 14 0 chr10 36740373 36740532 -108848756 - AluSx SINE Alu -25 287 121 234 0 0 0 chr10 36740532 36740558 -108848730 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1907 131 14 0 chr10 36740558 36740681 -108848607 - AluSx SINE Alu -191 121 1 47 47 0 12 chr10 36740681 36740700 -108848588 + AT_rich Low_complexity Low_complexity 67 85 0 1465 157 45 11 chr10 36740701 36740968 -108848320 - AluJo SINE Alu -22 290 15 222 180 80 0 chr10 36741192 36741242 -108848046 + MIR SINE MIR 88 141 -121 230 83 0 56 chr10 36742506 36742542 -108846746 + U2 snRNA snRNA 1 34 -154 1915 143 7 0 chr10 36742719 36743012 -108846276 + AluSx SINE Alu 1 295 -17 318 203 0 0 chr10 36744179 36744248 -108845040 + LTR58 LTR ERV1 361 429 -250 1510 75 58 40 chr10 36744285 36744511 -108844777 + MER30 DNA MER1_type 1 230 0 24 0 0 0 chr10 36746200 36746224 -108843064 + AT_rich Low_complexity Low_complexity 1 24 0 243 250 234 31 chr10 36748387 36748515 -108840773 - L2 LINE L2 -1 3312 3159 396 88 0 0 chr10 36750232 36750289 -108838999 + (CA)n Simple_repeat Simple_repeat 2 58 0 667 281 53 9 chr10 36750421 36750651 -108838637 + MIR SINE MIR 12 249 -13 1770 168 0 16 chr10 36750712 36751021 -108838267 + AluJb SINE Alu 3 306 -6 1789 160 0 3 chr10 36751087 36751380 -108837908 - AluSx SINE Alu -20 292 1 842 177 165 37 chr10 36752192 36752435 -108836853 + L1MA7 LINE L1 6008 6281 -10 1718 155 7 0 chr10 36752440 36752743 -108836545 - AluY SINE Alu -4 307 3 186 193 0 0 chr10 36752904 36752961 -108836327 + A-rich Low_complexity Low_complexity 1 57 0 22 56 0 0 chr10 36755167 36755203 -108834085 + GC_rich Low_complexity Low_complexity 1 36 0 233 316 79 0 chr10 36756617 36756693 -108832595 + L2 LINE L2 3191 3272 -41 1112 160 27 0 chr10 36757072 36757260 -108832028 + AluSg/x SINE Alu 103 295 -17 318 203 0 0 chr10 36758427 36758496 -108830792 + LTR58 LTR ERV1 361 429 -250 1481 76 62 40 chr10 36758533 36758758 -108830530 + MER30 DNA MER1_type 1 230 0 24 0 0 0 chr10 36760444 36760468 -108828820 + AT_rich Low_complexity Low_complexity 1 24 0 243 250 234 31 chr10 36762631 36762759 -108826529 - L2 LINE L2 -1 3312 3159 378 91 0 0 chr10 36764477 36764532 -108824756 + (CA)n Simple_repeat Simple_repeat 2 56 0 640 288 48 1 chr10 36764664 36764884 -108824404 + MIR SINE MIR 12 239 -23 1806 172 3 16 chr10 36764955 36765263 -108824025 + AluJb SINE Alu 3 306 -6 1868 158 3 3 chr10 36765329 36765621 -108823667 - AluSx SINE Alu -20 292 1 858 178 166 37 chr10 36766433 36766674 -108822614 + L1MA7 LINE L1 6008 6279 -12 2500 69 3 0 chr10 36766682 36766987 -108822301 - AluY SINE Alu -5 306 1 31 0 0 0 chr10 36766987 36767018 -108822270 + AT_rich Low_complexity Low_complexity 1 31 0 2050 129 3 0 chr10 36768605 36768892 -108820396 + AluSx SINE Alu 1 288 -24 274 216 259 11 chr10 36768926 36769060 -108820228 + MIR SINE MIR 5 174 -34 1840 151 11 3 chr10 36769335 36769620 -108819668 - AluJb SINE Alu -25 287 1 1763 144 70 30 chr10 36770979 36771278 -108818010 - AluJo SINE Alu 0 312 2 26 0 0 0 chr10 36771401 36771427 -108817861 + AT_rich Low_complexity Low_complexity 1 26 0 1520 163 0 8 chr10 36771819 36772059 -108817229 + AluJo SINE Alu 72 309 -3 21 0 0 0 chr10 36774376 36774397 -108814891 + AT_rich Low_complexity Low_complexity 1 21 0 1537 141 55 52 chr10 36774403 36774693 -108814595 - AluJo SINE Alu -4 308 18 2292 87 7 3 chr10 36776038 36776336 -108812952 - AluSg SINE Alu -11 299 1 296 284 134 0 chr10 36778439 36778566 -108810722 + L2 LINE L2 3165 3308 -5 2332 172 23 47 chr10 36779164 36779607 -108809681 + Tigger2a DNA MER2_type 1 432 -2 202 229 0 0 chr10 36779755 36779790 -108809498 - L3b LINE CR1 -15 1568 1534 899 254 0 0 chr10 36779799 36779988 -108809300 - MER5A DNA MER1_type 0 189 1 2069 147 0 0 chr10 36780118 36780424 -108808864 - AluSx SINE Alu -6 306 1 181 274 59 0 chr10 36780428 36780479 -108808809 - MIR3 SINE MIR -45 163 110 1424 148 163 44 chr10 36780680 36780950 -108808338 - AluJo SINE Alu 0 302 1 200 341 79 47 chr10 36780976 36781190 -108808098 + L2 LINE L2 664 884 -2430 1763 176 3 10 chr10 36781760 36782055 -108807233 + AluJo SINE Alu 1 293 -19 379 330 34 62 chr10 36783223 36783292 -108805996 - MIR3 SINE MIR -56 206 137 192 97 0 0 chr10 36783292 36783323 -108805965 + (CCCA)n Simple_repeat Simple_repeat 3 33 0 379 330 34 62 chr10 36783323 36783462 -108805826 - MIR3 SINE MIR -125 137 2 4085 163 117 21 chr10 36783641 36784395 -108804893 + LTR1B LTR ERV1 1 826 0 403 297 80 51 chr10 36786712 36786887 -108802401 - MER5A DNA MER1_type 0 189 10 329 252 203 0 chr10 36786914 36787037 -108802251 - Charlie8 DNA MER1_type -2228 189 42 1113 242 71 24 chr10 36787976 36788077 -108801211 + MLT1E LTR MaLR 1 96 -497 584 110 10 40 chr10 36788077 36788177 -108801111 - L1PA11 LINE L1 -3 6171 6075 1113 242 71 24 chr10 36788177 36788556 -108800732 + MLT1E LTR MaLR 96 592 -1 1782 159 33 0 chr10 36793244 36793546 -108795742 + AluJo SINE Alu 1 312 0 455 122 11 0 chr10 36793581 36793671 -108795617 + (GGAA)n Simple_repeat Simple_repeat 4 94 0 298 117 0 52 chr10 36794125 36794202 -108795086 + (GGAA)n Simple_repeat Simple_repeat 2 74 0 2034 108 38 11 chr10 36794558 36794864 -108794424 + AluSc SINE Alu 1 309 0 548 230 59 32 chr10 36796096 36796283 -108793005 - HAL1 LINE L1 -146 2361 2170 2101 282 68 40 chr10 36796455 36796706 -108792582 - HAL1 LINE L1 -790 1717 1475 315 0 0 0 chr10 36796706 36796741 -108792547 + (TA)n Simple_repeat Simple_repeat 1 35 0 2101 282 68 40 chr10 36796741 36797558 -108791730 - HAL1 LINE L1 -1032 1475 619 31 76 0 0 chr10 36799189 36799255 -108790033 + AT_rich Low_complexity Low_complexity 1 66 0 388 237 125 7 chr10 36800476 36800628 -108788660 - MER104 DNA Tc2 -10 170 1 451 294 43 18 chr10 36801762 36801925 -108787363 - L2 LINE L2 -994 2320 2154 22 0 0 0 chr10 36802930 36802952 -108786336 + AT_rich Low_complexity Low_complexity 1 22 0 2006 184 20 3 chr10 36803749 36804091 -108785197 - MER7A DNA MER2_type 0 346 1 430 301 46 31 chr10 36804370 36804566 -108784722 - MIR3 SINE MIR 0 208 10 672 169 0 85 chr10 36804622 36804752 -108784536 - AluJo/FRAM SINE Alu -21 291 173 417 208 0 0 chr10 36804753 36804825 -108784463 - AluJ/FLAM SINE Alu -230 72 1 291 303 83 28 chr10 36806416 36806525 -108782763 - L2 LINE L2 -19 3253 3139 559 301 56 44 chr10 36806780 36807099 -108782189 + HAL1 LINE L1 5 327 -2180 351 0 0 0 chr10 36807183 36807222 -108782066 + (TG)n Simple_repeat Simple_repeat 2 40 0 26 0 0 0 chr10 36807225 36807251 -108782037 + AT_rich Low_complexity Low_complexity 1 26 0 1666 164 47 0 chr10 36807636 36807911 -108781377 - AluJo SINE Alu -24 288 1 302 307 65 84 chr10 36808760 36808975 -108780313 + L2 LINE L2 3061 3271 -1 375 277 72 20 chr10 36809416 36809611 -108779677 + MER112 DNA MER1_type 8 212 -48 771 190 7 7 chr10 36809623 36809760 -108779528 + FLAM_C SINE Alu 7 143 0 923 217 25 0 chr10 36810185 36810383 -108778905 + MER3 DNA MER1_type 2 204 -5 191 345 17 0 chr10 36810719 36810777 -108778511 + MIR SINE MIR 45 103 -105 566 247 135 18 chr10 36811217 36811387 -108777901 - MIR SINE MIR -16 246 57 1846 148 50 13 chr10 36812494 36812792 -108776496 + AluJo SINE Alu 1 309 -3 419 204 83 65 chr10 36813026 36813273 -108776015 + MER41E LTR ERV1 55 430 -205 265 206 0 16 chr10 36813567 36813630 -108775658 + LTR28 LTR ERV1 1 62 -958 * 1864 167 23 27 chr10 36813597 36814012 -108775276 + MER61D LTR ERV1 14 501 0 186 362 58 0 chr10 36814068 36814137 -108775151 - L2 LINE L2 -39 3233 3161 668 217 47 0 chr10 36815096 36815225 -108774063 - MER58B DNA MER1_type -9 332 198 323 308 121 27 chr10 36816627 36816851 -108772437 - L3b LINE CR1 -237 1346 1102 1554 165 7 62 chr10 36817853 36818162 -108771126 + AluJo SINE Alu 1 292 -20 447 326 70 27 chr10 36821035 36821222 -108768066 + L3b LINE CR1 1284 1478 -105 188 295 11 53 chr10 36821231 36821326 -108767962 - L2 LINE L2 -640 2674 2584 1893 147 7 0 chr10 36821611 36821897 -108767391 - AluJo SINE Alu -24 288 1 227 303 327 0 chr10 36821921 36822086 -108767202 - L2 LINE L2 0 3272 3054 2336 107 0 7 chr10 36823178 36823488 -108765800 + AluSx SINE Alu 1 308 -4 269 171 289 0 chr10 36824048 36824124 -108765164 - MER5A DNA MER1_type -83 106 9 312 51 51 0 chr10 36824220 36824279 -108765009 + A-rich Low_complexity Low_complexity 6 67 0 24 32 0 0 chr10 36827735 36827766 -108761522 + AT_rich Low_complexity Low_complexity 1 31 0 336 154 29 0 chr10 36828454 36828558 -108760730 + (TG)n Simple_repeat Simple_repeat 2 108 0 31 0 0 0 chr10 36828691 36828722 -108760566 + AT_rich Low_complexity Low_complexity 1 31 0 195 42 0 0 chr10 36830669 36830693 -108758595 + (CA)n Simple_repeat Simple_repeat 1 24 0 1146 68 0 85 chr10 36831420 36831542 -108757746 - L1MA1 LINE L1 0 6302 6198 2300 78 3 0 chr10 36831542 36831835 -108757453 - AluSg SINE Alu -14 296 3 1146 68 0 85 chr10 36831835 36831889 -108757399 - L1MA1 LINE L1 -104 6198 6141 273 359 120 0 chr10 36832308 36832450 -108756838 - L2 LINE L2 -270 3043 2885 328 209 143 0 chr10 36832495 36832586 -108756702 + MIR SINE MIR 76 179 -83 180 0 0 0 chr10 36834234 36834254 -108755034 + (A)n Simple_repeat Simple_repeat 1 20 0 687 120 0 10 chr10 36834733 36834833 -108754455 - AluJ SINE Alu -25 287 189 1278 204 62 28 chr10 36834838 36835414 -108753874 + LTR9B LTR ERV1 7 644 0 1245 165 0 5 chr10 36835414 36835608 -108753680 - AluJ SINE Alu -119 193 1 459 0 0 0 chr10 36837304 36837355 -108751933 + (TTATA)n Simple_repeat Simple_repeat 4 54 0 325 293 78 36 chr10 36837407 36837574 -108751714 - MIR SINE MIR -50 212 39 1042 148 19 6 chr10 36837711 36837873 -108751415 + FRAM SINE Alu 1 164 -2 210 259 24 59 chr10 36838332 36838417 -108750871 + L2 LINE L2 3142 3223 -49 4235 204 123 22 chr10 36840446 36840547 -108748741 + Charlie1 DNA MER1_type 5 94 -2667 1344 179 50 44 chr10 36840547 36840844 -108748444 + AluJo SINE Alu 1 299 -13 4235 204 123 22 chr10 36840844 36842091 -108747197 + Charlie1 DNA MER1_type 94 2761 0 252 304 134 86 chr10 36842124 36842697 -108746591 - L2 LINE L2 -88 3184 2566 198 103 0 0 chr10 36843137 36843166 -108746122 + (TGGGGG)n Simple_repeat Simple_repeat 1 29 0 1704 122 38 94 chr10 36843575 36843894 -108745394 - AluJb SINE Alu -11 301 1 21 36 0 0 chr10 36846109 36846137 -108743151 + AT_rich Low_complexity Low_complexity 1 28 0 462 272 30 69 chr10 36847320 36847522 -108741766 + MIR SINE MIR 68 261 -1 2288 65 0 0 chr10 36848058 36848334 -108740954 - AluY SINE Alu -2 309 34 2113 85 31 27 chr10 36849227 36849521 -108739767 - AluSc SINE Alu -14 295 1 423 38 0 0 chr10 36849948 36850001 -108739287 + (TG)n Simple_repeat Simple_repeat 1 53 0 2660 166 20 11 chr10 36850387 36850872 -108738416 + LTR45B LTR ERV1 3 525 0 330 313 41 6 chr10 36851627 36851800 -108737488 - MIR SINE MIR -49 213 34 291 279 192 34 chr10 36852574 36852782 -108736506 + MIR SINE MIR 20 260 -2 250 254 42 0 chr10 36853218 36853289 -108735999 - L1MD2 LINE L1 -237 6122 6049 186 346 99 0 chr10 36853318 36853399 -108735889 - L2 LINE L2 -14 3258 3170 621 111 11 11 chr10 36853479 36853569 -108735719 - HY4 scRNA scRNA -3 90 1 1865 163 3 0 chr10 36853571 36853859 -108735429 - AluJo SINE Alu -15 297 9 2250 150 9 17 chr10 36854910 36855257 -108734031 + MER2 DNA MER2_type 1 344 0 2144 136 14 163 chr10 36855690 36856192 -108733096 - LTR32 LTR ERVL -4 467 41 2375 179 30 5 chr10 36857943 36858384 -108730904 - MER66A LTR ERV1 0 478 27 438 307 92 26 chr10 36861081 36861309 -108727979 + MIR SINE MIR 20 262 0 2289 107 7 0 chr10 36862994 36863304 -108725984 + AluSx SINE Alu 1 312 0 1828 172 52 77 chr10 36864539 36864981 -108724307 - MSTB1 LTR MaLR 0 432 2 1816 156 6 35 chr10 36865378 36865692 -108723596 - AluJo SINE Alu -7 305 1 723 198 8 0 chr10 36866040 36866161 -108723127 + FLAM_C SINE Alu 12 133 -10 487 331 102 8 chr10 36869226 36869492 -108719796 - L2 LINE L2 -4 3309 3019 185 132 0 151 chr10 36869771 36869824 -108719464 + L2 LINE L2 3228 3272 0 210 277 36 24 chr10 36872128 36872211 -108717077 + MIR SINE MIR 103 186 -76 2584 199 128 43 chr10 36872560 36872888 -108716400 + MER45B DNA AcHobo 1 300 -740 1065 92 61 0 chr10 36872888 36873051 -108716237 - L1MA8 LINE L1 0 6291 6119 2584 199 128 43 chr10 36873051 36873450 -108715838 + MER45B DNA AcHobo 300 797 -243 450 100 0 0 chr10 36873453 36873513 -108715775 + L1MB2 LINE L1 6072 6131 -40 1333 163 16 12 chr10 36873513 36873770 -108715518 + MER45B DNA AcHobo 773 1030 -10 234 294 114 57 chr10 36874714 36874942 -108714346 + L1MC4 LINE L1 7526 7766 -276 536 300 70 16 chr10 36875206 36875449 -108713839 - MIR SINE MIR 0 262 7 192 213 0 85 chr10 36876623 36876670 -108712618 - L2 LINE L2 -109 3163 3121 2409 104 0 0 chr10 36876832 36877139 -108712149 - AluSq SINE Alu -6 307 1 2392 201 50 72 chr10 36877168 36877761 -108711527 + L1MB7 LINE L1 4930 5535 -649 2068 138 0 0 chr10 36877761 36878051 -108711237 + AluSx SINE Alu 1 290 -22 2392 201 50 72 chr10 36878051 36878445 -108710843 + L1MB7 LINE L1 5535 5936 -248 5474 109 35 71 chr10 36878445 36878847 -108710441 + L1PA15 LINE L1 5070 5485 -680 2252 98 0 7 chr10 36878847 36879144 -108710144 + AluSp SINE Alu 1 295 -18 5474 109 35 71 chr10 36879144 36879349 -108709939 + L1PA15 LINE L1 5485 5696 -469 551 62 0 12 chr10 36879349 36879430 -108709858 + (TA)n Simple_repeat Simple_repeat 1 80 0 5474 109 35 71 chr10 36879430 36879941 -108709347 + L1PA15 LINE L1 5696 6162 -3 2392 201 50 72 chr10 36879941 36880029 -108709259 + L1MB7 LINE L1 5936 5961 -223 697 193 14 0 chr10 36880056 36880196 -108709092 + L1MB7 LINE L1 6035 6176 -8 1485 158 0 97 chr10 36880750 36881060 -108708228 - AluJo SINE Alu -21 291 12 231 36 0 0 chr10 36881180 36881208 -108708080 + (TG)n Simple_repeat Simple_repeat 2 29 0 1681 166 10 14 chr10 36882271 36882560 -108706728 + AluJo SINE Alu 6 293 -19 222 37 0 0 chr10 36882788 36882815 -108706473 + (A)n Simple_repeat Simple_repeat 1 27 0 1821 179 0 3 chr10 36884224 36884525 -108704763 - AluJo SINE Alu -12 300 1 180 0 0 0 chr10 36884541 36884561 -108704727 + (T)n Simple_repeat Simple_repeat 1 20 0 1087 286 159 21 chr10 36884697 36885352 -108703936 + L2 LINE L2 1903 2647 -667 256 218 13 51 chr10 36885364 36885442 -108703846 + LTR50 LTR ERVL 1 75 -720 * 379 256 101 0 chr10 36885432 36885561 -108703727 + LTR33A LTR ERVL 354 495 -28 429 343 82 6 chr10 36885806 36886140 -108703148 + L2 LINE L2 2684 3042 -230 23 33 0 0 chr10 36886182 36886212 -108703076 + AT_rich Low_complexity Low_complexity 1 30 0 180 111 0 0 chr10 36886305 36886332 -108702956 + (TGAA)n Simple_repeat Simple_repeat 3 29 0 21 0 0 0 chr10 36886608 36886629 -108702659 + AT_rich Low_complexity Low_complexity 1 21 0 214 217 0 43 chr10 36887567 36887613 -108701675 - MIR3 SINE MIR -21 187 144 2034 151 0 3 chr10 36891041 36891340 -108697948 + AluSx SINE Alu 1 298 -14 296 272 96 29 chr10 36891527 36891663 -108697625 - MIR SINE MIR -6 256 112 312 260 100 64 chr10 36891663 36891913 -108697375 + L1ME4a LINE L1 5765 6023 -98 560 303 65 47 chr10 36892451 36892959 -108696329 - L2 LINE L2 -3 3310 2800 184 246 154 0 chr10 36894010 36894075 -108695213 + MIR3 SINE MIR 134 208 0 1926 133 0 4 chr10 36894198 36894462 -108694826 + AluSx SINE Alu 26 288 -24 1807 105 101 0 chr10 36895077 36895334 -108693954 + AluSg SINE Alu 1 283 -27 243 255 32 43 chr10 36895405 36895499 -108693789 - MIR SINE MIR -37 225 133 414 0 0 0 chr10 36897100 36897146 -108692142 + (CAAAA)n Simple_repeat Simple_repeat 3 48 0 641 288 82 25 chr10 36897770 36898138 -108691150 + L1MEc LINE L1 31 419 -5977 845 189 77 0 chr10 36898452 36898621 -108690667 + AluJo SINE Alu 118 299 -13 624 228 31 81 chr10 36898630 36898753 -108690535 + L1MEc LINE L1 768 873 -5523 2126 117 20 0 chr10 36898753 36899052 -108690236 + AluSx SINE Alu 6 310 -2 624 228 31 81 chr10 36899052 36899187 -108690101 + L1MEc LINE L1 873 1013 -5383 403 189 72 1 chr10 36900063 36900159 -108689129 - MIR SINE MIR -70 138 37 843 168 0 15 chr10 36900701 36900838 -108688450 - FLAM_C SINE Alu -7 136 2 797 191 191 19 chr10 36902897 36903106 -108686182 - MIR SINE MIR 0 262 18 344 253 53 106 chr10 36903409 36903674 -108685614 - L2 LINE L2 -1 3312 3062 327 212 0 0 chr10 36904220 36904305 -108684983 + (TATATG)n Simple_repeat Simple_repeat 3 87 0 927 260 13 8 chr10 36905360 36905619 -108683669 + L1PB4 LINE L1 5896 6156 0 2258 103 3 0 chr10 36905626 36905928 -108683360 + AluSg SINE Alu 1 303 -7 324 0 0 0 chr10 36906046 36906082 -108683206 + (TG)n Simple_repeat Simple_repeat 2 37 0 362 315 68 12 chr10 36906662 36906824 -108682464 - MER91B DNA MER1_type -4 186 16 1633 161 17 53 chr10 36910281 36910580 -108678708 + AluJo SINE Alu 5 292 -20 2026 182 123 18 chr10 36910729 36911169 -108678119 - MLT1D LTR MaLR -19 486 1 275 161 18 36 chr10 36911308 36911364 -108677924 - Alu SINE Alu -1 300 246 1592 167 18 14 chr10 36911364 36911639 -108677649 - AluJo SINE Alu -34 278 3 881 169 0 0 chr10 36911640 36911776 -108677512 - AluJo SINE Alu -176 136 1 225 281 112 31 chr10 36911776 36912036 -108677252 - L2 LINE L2 -1603 1711 1431 2166 113 0 0 chr10 36912908 36913338 -108675950 + AluSx SINE Alu 1 430 0 312 256 175 22 chr10 36913568 36913705 -108675583 + MER5A DNA MER1_type 32 189 0 1724 184 7 13 chr10 36913728 36914038 -108675250 - AluJo SINE Alu -4 308 1 709 262 56 26 chr10 36914685 36914851 -108674437 - MIR SINE MIR -21 241 65 1788 157 28 7 chr10 36914851 36915138 -108674150 + AluJb SINE Alu 5 297 -15 709 262 56 26 chr10 36915138 36915204 -108674084 - MIR SINE MIR -197 65 2 2081 153 14 14 chr10 36915506 36915872 -108673416 + MER47A DNA MER2_type 1 366 0 258 180 0 0 chr10 36916130 36916180 -108673108 - MLT1J2 LTR MaLR -329 121 72 2025 129 7 17 chr10 36916220 36916522 -108672766 - AluJo SINE Alu -13 299 1 195 309 18 0 chr10 36917990 36918045 -108671243 - L3 LINE CR1 -20 1557 1502 843 200 22 22 chr10 36919225 36919410 -108669878 + MER5A DNA MER1_type 5 189 0 6334 29 0 0 chr10 36919673 36920409 -108668879 + L1PA5 LINE L1 5416 6151 -3 634 123 17 13 chr10 36920426 36920566 -108668722 + L1MA4A LINE L1 6160 6299 -4 200 158 0 123 chr10 36920713 36920770 -108668518 + L2 LINE L2 2688 2737 -577 2145 124 0 0 chr10 36921612 36921910 -108667378 - AluSq SINE Alu -15 298 1 2478 228 23 27 chr10 36922670 36923408 -108665880 + L1MD1 LINE L1 3657 4391 -1755 2886 243 37 48 chr10 36923508 36923926 -108665362 + L1MD1 LINE L1 4870 5291 -951 1569 188 15 0 chr10 36923926 36924187 -108665101 + AluJb SINE Alu 14 278 -34 303 49 0 0 chr10 36924190 36924231 -108665057 + (CAAA)n Simple_repeat Simple_repeat 1 41 0 2886 243 37 48 chr10 36924231 36925205 -108664083 + L1MD1 LINE L1 5293 6240 -2 1401 152 25 33 chr10 36929528 36929771 -108659517 - AluJo SINE Alu -30 282 42 2478 96 19 16 chr10 36929896 36930270 -108659018 + THE1C LTR MaLR 1 375 0 828 198 0 50 chr10 36930599 36930781 -108658507 - FRAM SINE Alu 0 176 4 230 329 29 7 chr10 36932274 36932414 -108656874 - MER103 DNA DNA -12 154 12 21 36 0 0 chr10 36935228 36935256 -108654032 + AT_rich Low_complexity Low_complexity 1 28 0 1827 140 9 59 chr10 36936742 36937064 -108652224 + AluJo SINE Alu 1 306 -6 1181 268 137 36 chr10 36937684 36938517 -108650771 - L2 LINE L2 0 3313 2371 1930 168 0 0 chr10 36939393 36939685 -108649603 + AluJb SINE Alu 1 292 -20 1057 148 32 56 chr10 36940434 36940650 -108648638 - AluJb SINE Alu -20 292 82 1987 131 0 0 chr10 36940672 36940954 -108648334 - AluSx SINE Alu -30 282 1 216 0 0 0 chr10 36940960 36940984 -108648304 + (TAA)n Simple_repeat Simple_repeat 1 24 0 365 280 84 35 chr10 36942971 36943114 -108646174 - MIR SINE MIR -66 196 47 684 165 0 9 chr10 36943231 36943346 -108645942 + FLAM_C SINE Alu 3 116 -17 27 0 0 0 chr10 36944174 36944201 -108645087 + AT_rich Low_complexity Low_complexity 1 27 0 726 172 15 0 chr10 36946385 36946519 -108642769 + AluJo SINE Alu 1 136 -176 1931 128 11 0 chr10 36947714 36947979 -108641309 - AluJo SINE Alu -30 282 15 24 32 0 0 chr10 36947996 36948027 -108641261 + AT_rich Low_complexity Low_complexity 1 31 0 332 222 192 0 chr10 36948304 36948403 -108640885 + FLAM_A SINE Alu 5 122 -11 1625 171 67 0 chr10 36948505 36948774 -108640514 + AluJo SINE Alu 3 289 -23 322 260 24 55 chr10 36949249 36949376 -108639912 + MLT1J LTR MaLR 4 126 -385 763 200 119 60 chr10 36949399 36949634 -108639654 + MIR SINE MIR 11 259 -3 1921 197 78 6 chr10 36949762 36950234 -108639054 + L1MB3 LINE L1 5676 6181 -2 313 304 80 0 chr10 36950252 36950390 -108638898 + MLT1J LTR MaLR 318 466 -45 1094 171 215 36 chr10 36951836 36951956 -108637332 + AluJb SINE Alu 1 98 -204 195 42 0 0 chr10 36951956 36951980 -108637308 + (TGAA)n Simple_repeat Simple_repeat 3 26 0 1094 171 215 36 chr10 36951980 36952110 -108637178 + AluJb SINE Alu 98 296 -6 432 313 124 72 chr10 36952773 36953485 -108635803 + L2 LINE L2 1952 2700 -614 941 289 8 4 chr10 36953784 36954023 -108635265 - MIR SINE MIR -21 241 2 307 299 19 38 chr10 36954029 36954186 -108635102 - MER112 DNA MER1_type -106 154 1 395 243 0 39 chr10 36954372 36954475 -108634813 + L2 LINE L2 3173 3271 -1 765 164 0 15 chr10 36955675 36955809 -108633479 + FLAM_C SINE Alu 2 133 0 568 318 52 32 chr10 36956050 36956302 -108632986 + MIR SINE MIR 4 260 -2 1504 163 52 45 chr10 36957157 36957445 -108631843 + AluJo SINE Alu 1 290 -22 1750 136 54 0 chr10 36957472 36957751 -108631537 + AluSx SINE Alu 1 294 -18 2173 99 11 0 chr10 36957830 36958114 -108631174 + AluSq SINE Alu 1 287 -26 2424 54 0 14 chr10 36958352 36958649 -108630639 - AluY SINE Alu -18 293 1 409 234 102 15 chr10 36958680 36958877 -108630411 - LTR16C LTR ERVL 0 491 278 2184 286 123 51 chr10 36959359 36960739 -108628549 - L2 LINE L2 -180 3133 1645 1650 174 44 0 chr10 36960739 36961037 -108628251 + AluJo SINE Alu 2 312 0 2184 286 123 51 chr10 36961037 36961171 -108628117 - L2 LINE L2 -1668 1645 1522 332 172 0 0 chr10 36962727 36962791 -108626497 - FLAM SINE Alu -1 132 69 1589 207 90 13 chr10 36966037 36966413 -108622875 + MER63B DNA MER1_type 32 436 0 207 0 0 0 chr10 36968349 36968372 -108620916 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 547 206 0 0 chr10 36968393 36968490 -108620798 - FLAM_A SINE Alu -44 98 2 203 277 20 40 chr10 36968592 36968693 -108620595 + CT-rich Low_complexity Low_complexity 2 100 0 2219 79 0 47 chr10 36970217 36970534 -108618754 - AluSg SINE Alu -6 304 3 2254 105 13 0 chr10 36970536 36970840 -108618448 - AluSc SINE Alu -1 308 1 315 295 11 0 chr10 36973834 36973929 -108615359 + MLT1L LTR MaLR 512 607 -8 183 339 52 52 chr10 36974899 36975014 -108614274 + L3 LINE CR1 1448 1562 -15 2078 111 0 0 chr10 36976476 36976747 -108612541 - AluSx SINE Alu -21 291 21 193 284 149 27 chr10 36977194 36977268 -108612020 + MIR SINE MIR 19 101 -107 2171 115 0 20 chr10 36977298 36977603 -108611685 + AluSg SINE Alu 1 299 -11 249 245 19 0 chr10 36979847 36979900 -108609388 - MIR3 SINE MIR -4 204 151 378 354 42 7 chr10 36980112 36980256 -108609032 - MIR3 SINE MIR -45 163 15 220 132 92 0 chr10 36981322 36981398 -108607890 + (TATATG)n Simple_repeat Simple_repeat 2 84 0 1628 192 94 41 chr10 36982037 36982527 -108606761 - Charlie1b DNA MER1_type -1 522 7 210 191 0 21 chr10 36984593 36984640 -108604648 + (TATATG)n Simple_repeat Simple_repeat 3 48 0 226 260 21 31 chr10 36984951 36985047 -108604241 + L1MC5 LINE L1 7832 7926 -35 714 197 120 0 chr10 36985118 36985260 -108604028 + MER58B DNA MER1_type 178 336 -5 180 111 0 0 chr10 36985804 36985831 -108603457 + (A)n Simple_repeat Simple_repeat 1 27 0 26 30 0 0 chr10 36988075 36988108 -108601180 + AT_rich Low_complexity Low_complexity 1 33 0 26 30 0 0 chr10 36988895 36988928 -108600360 + AT_rich Low_complexity Low_complexity 1 33 0 301 308 58 10 chr10 36989432 36989536 -108599752 - L2 LINE L2 -8 3264 3156 1139 63 0 0 chr10 36990701 36990844 -108598444 + AluY SINE Alu 169 311 0 191 388 24 0 chr10 36993447 36993532 -108595756 + MIR SINE MIR 44 130 -78 234 403 54 68 chr10 36993699 36993977 -108595311 - L2 LINE L2 -86 3186 2913 2108 135 3 0 chr10 36995728 36996039 -108593249 - AluSx SINE Alu 0 312 1 260 250 44 0 chr10 36996641 36996709 -108592579 + MIR3 SINE MIR 117 187 -21 281 309 73 41 chr10 36998377 36998500 -108590788 + L2 LINE L2 3146 3272 0 21 36 0 0 chr10 36999299 36999327 -108589961 + AT_rich Low_complexity Low_complexity 1 28 0 261 0 0 0 chr10 37001038 37001067 -108588221 + (A)n Simple_repeat Simple_repeat 1 29 0 1944 97 45 0 chr10 37001820 37002087 -108587201 + AluSg SINE Alu 1 279 -31 268 313 28 56 chr10 37003289 37003433 -108585855 + MIR3 SINE MIR 66 205 -3 9723 75 14 33 chr10 37003786 37005221 -108584067 + SVA Other Other 9 1417 0 1771 57 0 5 chr10 37005639 37005849 -108583439 + AluY SINE Alu 87 295 -16 386 328 117 38 chr10 37006116 37006511 -108582777 - L2 LINE L2 -354 2960 2515 1530 184 31 31 chr10 37006511 37006805 -108582483 + AluJb SINE Alu 1 294 -18 386 328 117 38 chr10 37006805 37006915 -108582373 - L2 LINE L2 -799 2515 2415 2292 90 10 3 chr10 37007108 37007409 -108581879 + AluSg SINE Alu 5 307 -3 567 169 153 0 chr10 37007729 37007847 -108581441 + FLAM_C SINE Alu 3 138 -5 412 262 0 0 chr10 37008808 37008892 -108580396 + L2 LINE L2 3225 3308 -5 826 194 12 12 chr10 37010004 37010164 -108579124 + AluJb SINE Alu 137 296 -16 202 306 14 14 chr10 37011226 37011298 -108577990 - MIR SINE MIR -7 255 184 21 0 0 0 chr10 37012074 37012095 -108577193 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr10 37013288 37013316 -108575972 + AT_rich Low_complexity Low_complexity 1 28 0 189 250 0 0 chr10 37014255 37014295 -108574993 + L2 LINE L2 3218 3257 -15 803 144 0 0 chr10 37015585 37015703 -108573585 + AluJb SINE Alu 1 118 -194 469 339 14 79 chr10 37015838 37016003 -108573285 + MIR SINE MIR 1 175 -87 1518 148 65 15 chr10 37016003 37016266 -108573022 + AluJo SINE Alu 1 276 -36 375 41 0 0 chr10 37016269 37016318 -108572970 + (CA)n Simple_repeat Simple_repeat 1 49 0 469 339 14 79 chr10 37016318 37016425 -108572863 + MIR SINE MIR 177 259 -3 21 36 0 0 chr10 37016605 37016633 -108572655 + AT_rich Low_complexity Low_complexity 1 28 0 826 244 159 26 chr10 37016826 37017166 -108572122 - LTR40b LTR ERVL -4 458 74 253 272 243 40 chr10 37017455 37017731 -108571557 + HAL1 LINE L1 1610 1941 -566 571 237 0 8 chr10 37017761 37017892 -108571396 - FLAM_A SINE Alu -3 130 1 600 278 101 6 chr10 37017959 37018304 -108570984 + HAL1 LINE L1 1987 2364 -143 1138 147 0 6 chr10 37018885 37019055 -108570233 + FRAM SINE Alu 1 168 -8 26 30 0 0 chr10 37019315 37019348 -108569940 + AT_rich Low_complexity Low_complexity 1 33 0 23 68 0 0 chr10 37019469 37019513 -108569775 + AT_rich Low_complexity Low_complexity 1 44 0 35 54 0 0 chr10 37020037 37020093 -108569195 + AT_rich Low_complexity Low_complexity 1 56 0 620 264 45 0 chr10 37021144 37021299 -108567989 + MIR SINE MIR 91 252 -10 25 0 0 0 chr10 37021540 37021565 -108567723 + AT_rich Low_complexity Low_complexity 1 25 0 2030 204 24 20 chr10 37021872 37022332 -108566956 + LTR40b LTR ERVL 1 462 0 1536 223 99 47 chr10 37022484 37022932 -108566356 + MLT2B1 LTR ERVL 2 480 -40 447 19 0 0 chr10 37022932 37022984 -108566304 + (TAGA)n Simple_repeat Simple_repeat 1 52 0 1536 223 99 47 chr10 37022984 37023028 -108566260 + MLT2B1 LTR ERVL 480 520 0 396 0 0 0 chr10 37023119 37023163 -108566125 + (TG)n Simple_repeat Simple_repeat 2 45 0 1693 180 3 7 chr10 37023172 37023461 -108565827 - AluJo SINE Alu -24 288 1 333 0 0 0 chr10 37024344 37024381 -108564907 + (CA)n Simple_repeat Simple_repeat 2 38 0 1014 188 0 51 chr10 37025189 37025386 -108563902 + AluJo SINE Alu 85 271 -41 299 64 0 43 chr10 37025386 37025433 -108563855 + AluJo SINE Alu 249 293 -9 869 117 16 0 chr10 37025735 37025863 -108563425 + FLAM_C SINE Alu 1 130 -3 480 180 238 0 chr10 37025879 37026001 -108563287 + L1MA4A LINE L1 6109 6259 -44 24 53 0 0 chr10 37026005 37026043 -108563245 + AT_rich Low_complexity Low_complexity 1 38 0 435 246 109 0 chr10 37026401 37026511 -108562777 + MER63A DNA MER1_type 52 173 -37 750 183 63 34 chr10 37028034 37028209 -108561079 + LTR8 LTR ERV1 1 180 -511 1032 199 112 52 chr10 37028214 37028500 -108560788 + LTR8A LTR ERV1 425 727 0 21 36 0 0 chr10 37029111 37029139 -108560149 + AT_rich Low_complexity Low_complexity 1 28 0 27 29 0 0 chr10 37029353 37029387 -108559901 + AT_rich Low_complexity Low_complexity 1 34 0 1683 181 7 0 chr10 37029390 37029672 -108559616 - AluJo SINE Alu -27 285 2 1784 170 0 17 chr10 37029981 37030275 -108559013 - AluJo SINE Alu -23 289 1 2241 116 3 0 chr10 37030434 37030737 -108558551 + AluSx SINE Alu 1 304 -8 183 80 0 0 chr10 37031140 37031165 -108558123 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 950 219 0 35 chr10 37031165 37031366 -108557922 - AluJb SINE Alu -32 280 87 256 336 45 15 chr10 37031374 37031508 -108557780 - L1MC/D LINE L1 -1991 5817 5680 1609 184 20 7 chr10 37032092 37032385 -108556903 + AluJo SINE Alu 1 297 -15 65 66 0 0 chr10 37032487 37032608 -108556680 + AT_rich Low_complexity Low_complexity 1 121 0 2104 82 0 72 chr10 37033011 37033315 -108555973 + AluY SINE Alu 1 282 -29 189 0 0 0 chr10 37033321 37033342 -108555946 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 1494 192 11 4 chr10 37033510 37033786 -108555502 - AluJb SINE Alu -10 302 25 1838 147 7 20 chr10 37035450 37035749 -108553539 - AluJo SINE Alu -17 295 1 437 281 92 42 chr10 37035991 37036367 -108552921 + L1ME4a LINE L1 5467 5864 -257 2054 141 3 0 chr10 37036600 37036898 -108552390 - AluSx SINE Alu -8 304 6 1389 148 145 42 chr10 37037162 37037494 -108551794 + MER47A DNA MER2_type 1 366 0 21 57 0 0 chr10 37037757 37037792 -108551496 + AT_rich Low_complexity Low_complexity 1 35 0 515 189 123 49 chr10 37038093 37038305 -108550983 + L1MC4 LINE L1 7345 7444 -341 2106 85 4 4 chr10 37038439 37038711 -108550577 + AluSc SINE Alu 1 272 -37 198 71 0 0 chr10 37038715 37038743 -108550545 + (CA)n Simple_repeat Simple_repeat 1 28 0 1427 150 21 4 chr10 37038986 37039219 -108550069 + AluSx SINE Alu 1 237 -75 2430 80 0 0 chr10 37039406 37039706 -108549582 + AluY SINE Alu 1 300 -11 198 0 0 0 chr10 37039855 37039877 -108549411 + (A)n Simple_repeat Simple_repeat 1 22 0 249 318 192 20 chr10 37040092 37040203 -108549085 + MIR SINE MIR 27 118 -144 1281 108 99 19 chr10 37040203 37040315 -108548973 - MER30 DNA MER1_type 0 230 128 438 20 0 0 chr10 37040315 37040366 -108548922 + (TTTA)n Simple_repeat Simple_repeat 3 53 0 1281 108 99 19 chr10 37040366 37040466 -108548822 - MER30 DNA MER1_type -102 128 1 249 318 192 20 chr10 37040466 37040552 -108548736 + MIR SINE MIR 118 258 -4 725 141 107 0 chr10 37041461 37041582 -108547706 - AluJo SINE Alu -178 134 1 360 0 0 0 chr10 37041823 37041863 -108547425 + (TG)n Simple_repeat Simple_repeat 2 41 0 301 290 0 0 chr10 37042044 37042137 -108547151 - L1M4 LINE L1 -1313 4833 4741 417 131 263 10 chr10 37042433 37042532 -108546756 + AluJb SINE Alu 189 312 0 26 88 0 0 chr10 37044833 37044901 -108544387 + AT_rich Low_complexity Low_complexity 1 68 0 31 0 0 0 chr10 37045404 37045435 -108543853 + AT_rich Low_complexity Low_complexity 1 31 0 378 0 0 0 chr10 37046068 37046110 -108543178 + (CA)n Simple_repeat Simple_repeat 2 43 0 1901 133 59 0 chr10 37048342 37048628 -108540660 + AluSg SINE Alu 1 303 -7 708 177 46 0 chr10 37048666 37048796 -108540492 + AluJo SINE Alu 1 136 -176 22 0 0 0 chr10 37048796 37048818 -108540470 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr10 37051218 37051240 -108538048 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr10 37052349 37052378 -108536910 + AT_rich Low_complexity Low_complexity 1 29 0 1378 200 65 0 chr10 37052667 37053005 -108536283 + AluJo SINE Alu 3 359 0 198 0 0 0 chr10 37054406 37054428 -108534860 + (CA)n Simple_repeat Simple_repeat 2 23 0 2173 113 0 19 chr10 37056132 37056442 -108532846 - AluSq SINE Alu 0 313 10 21 0 0 0 chr10 37057133 37057154 -108532134 + AT_rich Low_complexity Low_complexity 1 21 0 2222 91 20 0 chr10 37057556 37057852 -108531436 + AluSp SINE Alu 1 302 -11 22 35 0 0 chr10 37058274 37058303 -108530985 + AT_rich Low_complexity Low_complexity 1 29 0 1453 158 66 18 chr10 37058438 37058710 -108530578 - AluJo SINE Alu -22 290 6 234 0 0 0 chr10 37060255 37060281 -108529007 + (A)n Simple_repeat Simple_repeat 1 26 0 286 271 181 23 chr10 37061483 37061660 -108527628 - MIR SINE MIR -34 228 24 1683 150 78 14 chr10 37062889 37063182 -108526106 + AluJb SINE Alu 1 312 0 23 33 0 0 chr10 37063184 37063214 -108526074 + AT_rich Low_complexity Low_complexity 1 30 0 510 257 280 0 chr10 37063940 37064115 -108525173 + MER58A DNA MER1_type 1 224 0 1588 179 38 3 chr10 37064313 37064603 -108524685 + AluJb SINE Alu 1 300 -12 691 186 0 0 chr10 37064624 37064742 -108524546 + FLAM_C SINE Alu 1 118 -15 2346 87 3 3 chr10 37064852 37065150 -108524138 - AluSc SINE Alu -11 298 1 1329 127 0 0 chr10 37065152 37065341 -108523947 - AluSq SINE Alu -124 189 1 1702 205 0 3 chr10 37065344 37065641 -108523647 - AluJb SINE Alu -16 296 1 1992 140 0 3 chr10 37066059 37066351 -108522937 - AluSx SINE Alu -21 291 1 2910 13 0 0 chr10 37066709 37067027 -108522261 + AluYb8 SINE Alu 1 318 0 1909 147 40 0 chr10 37067221 37067521 -108521767 + AluSx SINE Alu 1 312 0 288 340 85 7 chr10 37068153 37068294 -108520994 + L2 LINE L2 3116 3267 -5 224 29 0 29 chr10 37070609 37070643 -108518645 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 619 191 0 0 chr10 37071303 37071408 -108517880 - FLAM_A SINE Alu -16 126 22 1683 150 78 14 chr10 37125300 37125593 -108463695 + AluJb SINE Alu 1 312 0 23 33 0 0 chr10 37125595 37125625 -108463663 + AT_rich Low_complexity Low_complexity 1 30 0 510 257 280 0 chr10 37126351 37126526 -108462762 + MER58A DNA MER1_type 1 224 0 1588 179 38 3 chr10 37126724 37127014 -108462274 + AluJb SINE Alu 1 300 -12 691 186 0 0 chr10 37127035 37127153 -108462135 + FLAM_C SINE Alu 1 118 -15 2346 87 3 3 chr10 37127263 37127561 -108461727 - AluSc SINE Alu -11 298 1 1329 127 0 0 chr10 37127563 37127752 -108461536 - AluSq SINE Alu -124 189 1 1717 202 0 3 chr10 37127755 37128052 -108461236 - AluJb SINE Alu -16 296 1 2056 138 0 0 chr10 37128470 37128761 -108460527 - AluSx SINE Alu -21 291 1 2822 22 0 0 chr10 37128985 37129299 -108459989 + AluYb8 SINE Alu 4 317 -1 1909 147 40 0 chr10 37129493 37129793 -108459495 + AluSx SINE Alu 1 312 0 287 319 92 14 chr10 37130425 37130566 -108458722 + L2 LINE L2 3116 3267 -5 224 29 0 29 chr10 37132881 37132915 -108456373 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 627 191 0 0 chr10 37133575 37133680 -108455608 - FLAM_A SINE Alu -16 126 22 189 250 0 0 chr10 37136480 37136520 -108452768 + L2 LINE L2 3218 3257 -15 803 144 0 0 chr10 37137810 37137928 -108451360 + AluJb SINE Alu 1 118 -194 469 339 14 79 chr10 37138063 37138228 -108451060 + MIR SINE MIR 1 175 -87 1518 148 65 15 chr10 37138228 37138491 -108450797 + AluJo SINE Alu 1 276 -36 375 41 0 0 chr10 37138494 37138543 -108450745 + (CA)n Simple_repeat Simple_repeat 1 49 0 469 339 14 79 chr10 37138543 37138650 -108450638 + MIR SINE MIR 177 259 -3 21 36 0 0 chr10 37138830 37138858 -108450430 + AT_rich Low_complexity Low_complexity 1 28 0 826 244 159 26 chr10 37139051 37139391 -108449897 - LTR40b LTR ERVL -4 458 74 253 272 243 40 chr10 37139680 37139956 -108449332 + HAL1 LINE L1 1610 1941 -566 571 237 0 8 chr10 37139986 37140117 -108449171 - FLAM_A SINE Alu -3 130 1 600 278 101 6 chr10 37140184 37140529 -108448759 + HAL1 LINE L1 1987 2364 -143 1138 147 0 6 chr10 37141111 37141281 -108448007 + FRAM SINE Alu 1 168 -8 26 30 0 0 chr10 37141541 37141574 -108447714 + AT_rich Low_complexity Low_complexity 1 33 0 23 68 0 0 chr10 37141695 37141739 -108447549 + AT_rich Low_complexity Low_complexity 1 44 0 35 54 0 0 chr10 37142302 37142358 -108446930 + AT_rich Low_complexity Low_complexity 1 56 0 620 264 45 0 chr10 37143409 37143564 -108445724 + MIR SINE MIR 91 252 -10 25 0 0 0 chr10 37143805 37143830 -108445458 + AT_rich Low_complexity Low_complexity 1 25 0 2030 204 24 20 chr10 37144137 37144597 -108444691 + LTR40b LTR ERVL 1 462 0 1536 223 99 47 chr10 37144749 37145197 -108444091 + MLT2B1 LTR ERVL 2 480 -40 447 19 0 0 chr10 37145197 37145249 -108444039 + (TAGA)n Simple_repeat Simple_repeat 1 52 0 1536 223 99 47 chr10 37145249 37145293 -108443995 + MLT2B1 LTR ERVL 480 520 0 291 71 0 0 chr10 37145384 37145426 -108443862 + (TG)n Simple_repeat Simple_repeat 2 43 0 1669 189 4 0 chr10 37145443 37145724 -108443564 - AluJo SINE Alu -30 282 1 333 0 0 0 chr10 37146607 37146644 -108442644 + (CA)n Simple_repeat Simple_repeat 2 38 0 1014 188 0 51 chr10 37147451 37147648 -108441640 + AluJo SINE Alu 85 271 -41 299 64 0 43 chr10 37147648 37147695 -108441593 + AluJo SINE Alu 249 293 -9 869 117 16 0 chr10 37147997 37148125 -108441163 + FLAM_C SINE Alu 1 130 -3 480 180 238 0 chr10 37148141 37148263 -108441025 + L1MA4A LINE L1 6109 6259 -44 24 53 0 0 chr10 37148267 37148305 -108440983 + AT_rich Low_complexity Low_complexity 1 38 0 435 246 109 0 chr10 37148663 37148773 -108440515 + MER63A DNA MER1_type 52 173 -37 750 183 63 34 chr10 37150296 37150471 -108438817 + LTR8 LTR ERV1 1 180 -511 1052 196 112 52 chr10 37150476 37150762 -108438526 + LTR8A LTR ERV1 425 727 0 21 36 0 0 chr10 37151373 37151401 -108437887 + AT_rich Low_complexity Low_complexity 1 28 0 27 29 0 0 chr10 37151615 37151649 -108437639 + AT_rich Low_complexity Low_complexity 1 34 0 1697 177 7 0 chr10 37151652 37151934 -108437354 - AluJo SINE Alu -27 285 2 1784 170 0 17 chr10 37152243 37152537 -108436751 - AluJo SINE Alu -23 289 1 2241 116 3 0 chr10 37152697 37153000 -108436288 + AluSx SINE Alu 1 304 -8 183 80 0 0 chr10 37153403 37153428 -108435860 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 950 214 0 35 chr10 37153428 37153629 -108435659 - AluJo SINE Alu -32 280 87 256 336 45 15 chr10 37153637 37153771 -108435517 - L1MC/D LINE L1 -1991 5817 5680 1557 194 20 7 chr10 37154355 37154648 -108434640 + AluJo SINE Alu 1 297 -15 65 66 0 0 chr10 37154750 37154871 -108434417 + AT_rich Low_complexity Low_complexity 1 121 0 764 310 45 50 chr10 37155120 37155517 -108433771 - L2 LINE L2 0 3313 2919 355 312 101 30 chr10 37155606 37155805 -108433483 + MIR SINE MIR 2 214 -48 5262 143 23 48 chr10 37155830 37157055 -108432233 + L1MA8 LINE L1 5089 6285 -6 1996 110 11 7 chr10 37157969 37158274 -108431014 - AluSx SINE Alu 0 306 1 1604 142 77 4 chr10 37158876 37159137 -108430151 - AluJo SINE Alu -13 299 20 5323 133 53 46 chr10 37160252 37161316 -108427972 + MER11C LTR ERVK 1 1071 0 716 221 0 0 chr10 37161829 37161956 -108427332 + FLAM_A SINE Alu 1 127 -6 1618 199 0 22 chr10 37162849 37163013 -108426275 - AluJo SINE Alu -7 305 139 384 40 0 0 chr10 37163013 37163063 -108426225 + (TTTTG)n Simple_repeat Simple_repeat 2 51 0 2031 125 0 4 chr10 37163064 37163344 -108425944 - AluSg SINE Alu -31 279 1 1618 199 0 22 chr10 37163344 37163489 -108425799 - AluJo SINE Alu -172 140 1 248 312 72 8 chr10 37164015 37164140 -108425148 - MIR SINE MIR -64 198 66 2270 107 7 3 chr10 37164918 37165227 -108424061 + AluSq SINE Alu 1 310 -3 2481 66 23 0 chr10 37165228 37165531 -108423757 + AluY SINE Alu 2 311 0 375 23 0 0 chr10 37165792 37165836 -108423452 + (CA)n Simple_repeat Simple_repeat 1 44 0 232 310 58 0 chr10 37167776 37167863 -108421425 - MIR SINE MIR -11 251 160 203 327 20 52 chr10 37168066 37168219 -108421069 - L2 LINE L2 -656 2658 2511 22 0 0 0 chr10 37168420 37168442 -108420846 + AT_rich Low_complexity Low_complexity 1 22 0 492 285 141 47 chr10 37169911 37170528 -108418760 + L1MC4a LINE L1 5499 6173 -1635 196 222 0 0 chr10 37172672 37172708 -108416580 - L2 LINE L2 -1897 1417 1382 1936 129 11 7 chr10 37172912 37173192 -108416096 - AluSx SINE Alu -7 305 25 22 0 0 0 chr10 37175244 37175266 -108414022 + AT_rich Low_complexity Low_complexity 1 22 0 1569 185 16 38 chr10 37176049 37176363 -108412925 + AluJo SINE Alu 4 310 -2 2193 113 16 38 chr10 37176841 37177213 -108412075 - THE1B LTR MaLR 0 364 1 518 302 94 5 chr10 37179817 37180019 -108409269 - MIR SINE MIR -18 244 25 21 0 0 0 chr10 37180142 37180163 -108409125 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr10 37180423 37180448 -108408840 + AT_rich Low_complexity Low_complexity 1 25 0 3794 168 15 72 chr10 37180554 37180659 -108408629 + L1MA9 LINE L1 5384 5493 -819 2089 145 6 3 chr10 37180659 37180970 -108408318 + AluSx SINE Alu 1 312 0 2117 125 0 16 chr10 37180980 37181285 -108408003 + AluSc SINE Alu 1 300 -9 3794 168 15 72 chr10 37181285 37181591 -108407697 + L1MA9 LINE L1 5502 5824 -488 276 30 0 0 chr10 37181591 37181624 -108407664 + (TG)n Simple_repeat Simple_repeat 2 34 0 3794 168 15 72 chr10 37181624 37181977 -108407311 + L1MA9 LINE L1 5824 6196 -116 1576 180 10 37 chr10 37181977 37182268 -108407020 + AluJo SINE Alu 1 285 -27 180 0 0 0 chr10 37182268 37182288 -108407000 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 3794 168 15 72 chr10 37182296 37182378 -108406910 + L1MA9 LINE L1 6196 6184 -128 2463 61 3 0 chr10 37182378 37182675 -108406613 - AluY SINE Alu -12 299 2 3794 168 15 72 chr10 37182675 37182799 -108406489 + L1MA9 LINE L1 6183 6312 0 1228 48 0 24 chr10 37182911 37183078 -108406210 + L1PA4 LINE L1 5993 6155 0 456 249 40 49 chr10 37185637 37185946 -108403342 + L1MC4 LINE L1 6977 7217 -744 225 337 30 30 chr10 37186393 37186559 -108402729 + L2 LINE L2 2565 2730 -584 219 286 54 0 chr10 37186694 37186750 -108402538 + L2 LINE L2 3002 3060 -212 259 50 50 0 chr10 37188962 37189002 -108400286 - Alu SINE Alu -12 289 248 2318 94 0 3 chr10 37189758 37190057 -108399231 - AluSq SINE Alu -15 298 1 1705 201 7 0 chr10 37191060 37191358 -108397930 - AluJb SINE Alu -12 300 1 1966 160 0 16 chr10 37191649 37191962 -108397326 - AluJo SINE Alu -4 308 1 449 245 0 9 chr10 37191982 37192088 -108397200 + FRAM SINE Alu 56 160 -16 2358 66 0 16 chr10 37192625 37192930 -108396358 - AluY SINE Alu -11 300 1 24 32 0 0 chr10 37193140 37193171 -108396117 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr10 37193193 37193222 -108396066 + AT_rich Low_complexity Low_complexity 1 29 0 341 275 24 97 chr10 37193930 37194011 -108395277 + MIR SINE MIR 71 156 -106 2477 68 3 0 chr10 37194011 37194321 -108394967 + AluY SINE Alu 1 311 0 341 275 24 97 chr10 37194321 37194446 -108394842 + MIR SINE MIR 156 262 0 21 0 0 0 chr10 37194740 37194761 -108394527 + AT_rich Low_complexity Low_complexity 1 21 0 2294 100 0 3 chr10 37194782 37195091 -108394197 + AluSx SINE Alu 1 308 -4 1427 183 52 17 chr10 37196025 37196315 -108392973 + AluJb SINE Alu 4 303 -9 210 222 44 0 chr10 37196317 37196362 -108392926 + polypurine Low_complexity Low_complexity 4 50 0 544 197 14 50 chr10 37196363 37196682 -108392606 + GA-rich Low_complexity Low_complexity 1 307 0 384 184 15 55 chr10 37197159 37197430 -108391858 + GA-rich Low_complexity Low_complexity 1 260 0 1823 156 47 26 chr10 37197732 37198072 -108391216 + MER7A DNA MER2_type 1 345 -1 211 171 110 98 chr10 37198217 37198299 -108390989 + MER5A DNA MER1_type 103 185 -4 369 225 17 81 chr10 37198475 37198648 -108390640 + L1ME LINE L1 5588 5749 -372 1710 184 9 26 chr10 37198921 37199268 -108390020 + MER2 DNA MER2_type 1 341 -3 341 302 102 36 chr10 37201125 37201350 -108387938 + L1ME4a LINE L1 5683 5922 -199 297 0 0 0 chr10 37201350 37201383 -108387905 + (TG)n Simple_repeat Simple_repeat 2 34 0 1551 201 11 0 chr10 37201487 37201792 -108387496 + AluJb SINE Alu 1 308 0 180 194 0 0 chr10 37202995 37203031 -108386257 - L2 LINE L2 0 3313 3278 1915 153 7 0 chr10 37203135 37203429 -108385859 - AluSx SINE Alu -16 296 1 575 321 72 9 chr10 37204471 37204692 -108384596 + MIR SINE MIR 14 248 -14 996 132 26 5 chr10 37204841 37205031 -108384257 + L1MA4 LINE L1 6096 6289 -11 2023 118 0 14 chr10 37205591 37205879 -108383409 - AluSx SINE Alu -28 284 1 29 0 0 0 chr10 37207235 37207264 -108382024 + AT_rich Low_complexity Low_complexity 1 29 0 863 173 0 0 chr10 37207425 37207558 -108381730 + AluJ SINE Alu 1 133 -169 853 180 0 56 chr10 37207559 37207601 -108381687 + AluJ SINE Alu 129 172 -140 2335 185 41 2 chr10 37207601 37208065 -108381223 + MER66B LTR ERV1 5 486 0 853 180 0 56 chr10 37208065 37208183 -108381105 + AluJ SINE Alu 172 280 -32 222 222 0 0 chr10 37208644 37208689 -108380599 - MIR SINE MIR -63 145 101 4220 207 102 30 chr10 37209066 37210027 -108379261 - Charlie1a DNA MER1_type -1306 1455 365 637 224 0 8 chr10 37210027 37210161 -108379127 + FLAM_A SINE Alu 1 133 0 4220 207 102 30 chr10 37210161 37210555 -108378733 - Charlie1a DNA MER1_type -2396 365 1 202 303 45 0 chr10 37210564 37210653 -108378635 + MIR3 SINE MIR 85 177 -31 2198 87 4 0 chr10 37212572 37212847 -108376441 - AluSp SINE Alu -21 292 17 273 224 172 30 chr10 37213042 37213176 -108376112 + L1MD1 LINE L1 6069 6221 -21 2411 65 0 20 chr10 37213181 37213487 -108375801 - AluY SINE Alu -11 300 1 1549 194 7 13 chr10 37214260 37214559 -108374729 - AluJb SINE Alu -15 297 1 765 122 28 126 chr10 37214759 37214811 -108374477 - L1PA15 LINE L1 -2 6163 6107 2339 103 3 0 chr10 37214811 37215122 -108374166 - AluSx SINE Alu 0 312 1 765 122 28 126 chr10 37215122 37215217 -108374071 - L1PA15 LINE L1 -58 6107 6041 243 0 0 0 chr10 37215217 37215244 -108374044 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 765 122 28 126 chr10 37215244 37215309 -108373979 - L1PA15 LINE L1 -124 6041 5971 1385 162 6 106 chr10 37215864 37216045 -108373243 - AluJo SINE Alu -23 289 152 1767 179 10 0 chr10 37216045 37216352 -108372936 - AluJo SINE Alu -2 310 1 1385 162 6 106 chr10 37216352 37216491 -108372797 - AluJo SINE Alu -160 152 1 21 0 0 0 chr10 37216867 37216888 -108372400 + AT_rich Low_complexity Low_complexity 1 21 0 2252 95 0 23 chr10 37216892 37217197 -108372091 + AluSp SINE Alu 6 303 -10 1802 154 0 4 chr10 37217254 37217533 -108371755 + AluJb SINE Alu 35 312 0 290 325 0 0 chr10 37217651 37217731 -108371557 + L2 LINE L2 3192 3271 -42 2459 248 45 2 chr10 37217742 37218363 -108370925 + MER82 DNA MER2_type 1 648 -5 224 29 0 29 chr10 37218534 37218568 -108370720 + (TTG)n Simple_repeat Simple_repeat 2 34 0 248 373 0 0 chr10 37218632 37218707 -108370581 - L2 LINE L2 -65 3207 3133 3436 147 104 42 chr10 37219033 37219076 -108370212 - MER4D LTR ERV1 -6 863 824 2152 118 0 0 chr10 37219076 37219372 -108369916 + AluSx SINE Alu 1 296 -16 3436 147 104 42 chr10 37219372 37219939 -108369349 - MER4D LTR ERV1 -45 824 177 1845 150 21 0 chr10 37219939 37220226 -108369062 - AluJo SINE Alu -7 305 13 3436 147 104 42 chr10 37220226 37220415 -108368873 - MER4D LTR ERV1 -692 177 1 248 316 40 42 chr10 37220455 37220662 -108368626 - L2 LINE L2 -280 2992 2791 305 217 60 60 chr10 37220717 37220800 -108368488 - MER5A DNA MER1_type -89 100 18 219 158 35 18 chr10 37220840 37220897 -108368391 + (TA)n Simple_repeat Simple_repeat 1 58 0 22 0 0 0 chr10 37221840 37221862 -108367426 + AT_rich Low_complexity Low_complexity 1 22 0 962 159 0 0 chr10 37222330 37222487 -108366801 - AluJb SINE Alu -2 310 154 1411 132 5 32 chr10 37223077 37223297 -108365991 + AluSx SINE Alu 1 214 -98 560 295 19 78 chr10 37223776 37224044 -108365244 - MIR SINE MIR -2 260 9 216 67 0 0 chr10 37224412 37224442 -108364846 + (GA)n Simple_repeat Simple_repeat 2 31 0 330 127 0 18 chr10 37224559 37224614 -108364674 - Alu SINE Alu -248 54 1 475 268 57 25 chr10 37224830 37224987 -108364301 - MER5B DNA MER1_type -2 176 15 360 162 44 0 chr10 37225062 37225130 -108364158 - MER5A DNA MER1_type -77 112 42 252 258 0 0 chr10 37225157 37225223 -108364065 - Charlie5 DNA MER1_type -2529 83 18 1256 218 61 41 chr10 37227378 37227471 -108361817 - MER63B DNA MER1_type -642 420 330 2311 128 0 0 chr10 37227471 37227783 -108361505 + AluSq SINE Alu 1 312 -1 1256 218 61 41 chr10 37227783 37228101 -108361187 - MER63B DNA MER1_type -732 330 1 317 224 87 22 chr10 37228584 37228767 -108360521 - Charlie7 DNA MER1_type 0 2612 2418 1408 244 74 95 chr10 37229573 37229942 -108359346 + L1MC5 LINE L1 6694 7069 -892 1840 164 16 19 chr10 37229942 37230253 -108359035 + AluJb SINE Alu 1 310 -2 1408 244 74 95 chr10 37230253 37231065 -108358223 + L1MC5 LINE L1 7069 7850 -111 1173 164 5 5 chr10 37231308 37231516 -108357772 - MER2 DNA MER2_type -135 210 3 1979 162 0 7 chr10 37232516 37232824 -108356464 + AluSx SINE Alu 3 308 -4 1627 171 89 0 chr10 37233808 37234123 -108355165 + MER2 DNA MER2_type 1 343 -1 1860 124 4 4 chr10 37234481 37234739 -108354549 + AluSx SINE Alu 1 258 -54 208 180 20 0 chr10 37234748 37234798 -108354490 + A-rich Low_complexity Low_complexity 4 54 0 1871 165 104 15 chr10 37235155 37235548 -108353740 + MSTA LTR MaLR 1 428 0 1197 200 79 110 chr10 37235718 37235863 -108353425 + MLT1D LTR MaLR 1 149 -356 1324 205 76 6 chr10 37235863 37236204 -108353084 + MLT1A1 LTR MaLR 1 365 0 1197 200 79 110 chr10 37236204 37236578 -108352710 + MLT1D LTR MaLR 149 504 -1 446 221 177 0 chr10 37236681 37236794 -108352494 + FLAM_A SINE Alu 1 133 0 1391 167 59 38 chr10 37238156 37238443 -108350845 - AluJo SINE Alu -19 293 1 1914 149 30 0 chr10 37239872 37240174 -108349114 + AluSx SINE Alu 1 311 -1 186 71 0 0 chr10 37241562 37241590 -108347698 + (A)n Simple_repeat Simple_repeat 1 28 0 464 165 10 19 chr10 37243449 37243552 -108345736 - ORSL DNA AcHobo -33 242 141 314 213 21 53 chr10 37243658 37243752 -108345536 - ORSL DNA AcHobo -184 91 1 715 245 0 19 chr10 37243942 37244150 -108345138 + Charlie2 DNA MER1_type 1881 2084 -778 * 1378 186 10 10 chr10 37244146 37244452 -108344836 + MER89 LTR ERV1 254 559 0 252 160 151 28 chr10 37244552 37244658 -108344630 + Charlie2 DNA MER1_type 2443 2561 -301 1234 251 52 26 chr10 37244804 37245341 -108343947 - L1MC5 LINE L1 -173 7788 7238 915 189 11 0 chr10 37245374 37245554 -108343734 - MSTD LTR MaLR 0 396 215 939 205 11 5 chr10 37245750 37245940 -108343348 - AluJb SINE Alu -15 297 107 557 198 0 0 chr10 37246009 37246115 -108343173 - MSTD LTR MaLR -290 106 1 1293 250 73 39 chr10 37246115 37246676 -108342612 - L1MC5 LINE L1 -746 7215 6636 21 0 0 0 chr10 37247106 37247127 -108342161 + AT_rich Low_complexity Low_complexity 1 21 0 2126 103 0 10 chr10 37247310 37247601 -108341687 - AluSg SINE Alu -22 288 1 707 224 99 10 chr10 37247780 37247981 -108341307 - MER20 DNA MER1_type 0 219 1 24 0 0 0 chr10 37249835 37249859 -108339429 + AT_rich Low_complexity Low_complexity 1 24 0 2067 99 31 27 chr10 37249993 37250285 -108339003 - AluSx SINE Alu -19 293 1 218 289 0 0 chr10 37251511 37251563 -108337725 + (TATATG)n Simple_repeat Simple_repeat 1 52 0 4060 206 71 63 chr10 37251639 37251721 -108337567 + L1MC4a LINE L1 6335 6415 -1393 192 40 0 0 chr10 37251721 37251746 -108337542 + (CA)n Simple_repeat Simple_repeat 1 25 0 4060 206 71 63 chr10 37251746 37251887 -108337401 + L1MC4a LINE L1 6415 6553 -1255 2160 138 0 0 chr10 37251887 37252199 -108337089 - AluSx SINE Alu 0 312 1 4060 206 71 63 chr10 37252199 37253436 -108335852 + L1MC4a LINE L1 6553 7808 0 23 68 0 0 chr10 37253436 37253480 -108335808 + AT_rich Low_complexity Low_complexity 1 44 0 2183 109 3 3 chr10 37253552 37253841 -108335447 + AluSx SINE Alu 1 292 -20 756 0 0 0 chr10 37253841 37253925 -108335363 + (CATAA)n Simple_repeat Simple_repeat 2 85 0 2183 109 3 3 chr10 37253925 37253939 -108335349 + AluSx SINE Alu 291 304 -8 806 240 23 27 chr10 37254598 37254819 -108334469 - MER58A DNA MER1_type -1 223 4 227 308 55 75 chr10 37255882 37256028 -108333260 + MIR SINE MIR 5 147 -115 1276 257 57 14 chr10 37256038 37256477 -108332811 + MLT1D LTR MaLR 4 461 -44 2267 112 0 3 chr10 37259843 37260147 -108329141 + AluSc SINE Alu 3 305 -4 197 235 39 0 chr10 37262509 37262560 -108326728 + MIR SINE MIR 73 125 -83 270 0 0 0 chr10 37262568 37262598 -108326690 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 14370 142 59 13 chr10 37263529 37263769 -108325519 - Tigger2 DNA MER2_type 0 2718 2491 2224 121 0 3 chr10 37263769 37264074 -108325214 - AluSx SINE Alu -7 305 2 14370 142 59 13 chr10 37264074 37266429 -108322859 - Tigger2 DNA MER2_type -227 2491 2 1776 165 45 6 chr10 37266888 37267221 -108322067 - MER7A DNA MER2_type 0 346 3 1422 142 0 0 chr10 37267263 37267481 -108321807 + L1PA16 LINE L1 5941 6158 -8 2125 120 7 3 chr10 37267565 37267865 -108321423 + AluSx SINE Alu 1 301 -11 1439 54 0 0 chr10 37268151 37268319 -108320969 + AluY SINE Alu 127 294 -17 370 322 15 16 chr10 37268450 37268608 -108320680 + MIR SINE MIR 18 149 -59 2074 142 0 3 chr10 37268769 37269058 -108320230 + AluSx SINE Alu 1 288 -24 2044 105 49 3 chr10 37269531 37269816 -108319472 - AluSx SINE Alu -14 298 1 21 0 0 0 chr10 37270244 37270265 -108319023 + AT_rich Low_complexity Low_complexity 1 21 0 1473 196 34 14 chr10 37271044 37271335 -108317953 - AluJo SINE Alu -15 297 1 536 65 13 13 chr10 37272131 37272208 -108317080 + Alu SINE Alu 227 303 -8 1108 254 60 3 chr10 37272951 37273266 -108316022 + MER46C DNA MER2_type 1 333 -5 1455 233 48 22 chr10 37273276 37273427 -108315861 - MER63B DNA MER1_type -634 428 283 2083 104 31 3 chr10 37273427 37273716 -108315572 + AluSx SINE Alu 1 297 -15 1455 233 48 22 chr10 37273716 37273976 -108315312 - MER63B DNA MER1_type -779 283 6 402 213 0 0 chr10 37274254 37274329 -108314959 + L2 LINE L2 3238 3312 -1 21 0 0 0 chr10 37274365 37274386 -108314902 + AT_rich Low_complexity Low_complexity 1 21 0 1246 194 0 87 chr10 37274513 37274822 -108314466 + AluJo SINE Alu 1 282 -30 24 0 0 0 chr10 37275089 37275113 -108314175 + AT_rich Low_complexity Low_complexity 1 24 0 969 137 7 0 chr10 37275934 37276080 -108313208 - FRAM SINE Alu -19 147 1 207 0 0 0 chr10 37276243 37276266 -108313022 + (TG)n Simple_repeat Simple_repeat 1 23 0 405 0 0 0 chr10 37276279 37276324 -108312964 + (CA)n Simple_repeat Simple_repeat 2 46 0 1484 271 135 45 chr10 37276449 37276880 -108312408 - HAL1 LINE L1 -948 1559 1168 1603 183 20 20 chr10 37276880 37277180 -108312108 - AluJo SINE Alu -12 300 1 1484 271 135 45 chr10 37277180 37277886 -108311402 - HAL1 LINE L1 -1339 1168 319 825 202 45 6 chr10 37277907 37278085 -108311203 - AluJb SINE Alu -8 304 120 24 54 0 18 chr10 37278085 37278115 -108311173 + AT_rich Low_complexity Low_complexity 1 31 -24 2185 87 11 11 chr10 37278115 37278402 -108310886 - AluSq SINE Alu -26 287 1 24 54 0 18 chr10 37278402 37278427 -108310861 + AT_rich Low_complexity Low_complexity 31 55 0 639 174 43 22 chr10 37278433 37278571 -108310717 - AluJo SINE Alu -81 231 91 518 217 11 0 chr10 37278674 37278766 -108310522 - AluJo SINE Alu -218 94 2 652 297 35 18 chr10 37278799 37279003 -108310285 - HAL1 LINE L1 -2209 298 86 387 0 0 0 chr10 37279003 37279046 -108310242 + (CAA)n Simple_repeat Simple_repeat 2 44 0 652 297 35 18 chr10 37279046 37279127 -108310161 - HAL1 LINE L1 -2421 86 8 2021 137 0 10 chr10 37279390 37279690 -108309598 - AluSx SINE Alu -15 297 1 874 190 0 0 chr10 37280505 37280647 -108308641 - AluJo/FRAM SINE Alu -30 282 141 289 220 0 0 chr10 37280647 37280697 -108308591 - AluJ/monomer SINE Alu -250 50 1 200 91 68 0 chr10 37281011 37281055 -108308233 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 461 267 222 9 chr10 37281301 37281526 -108307762 - L2 LINE L2 -1294 2020 1748 1791 174 7 3 chr10 37281997 37282301 -108306987 + AluJo SINE Alu 1 305 -7 1841 155 3 10 chr10 37282846 37283172 -108306116 - AluJb SINE Alu 0 312 1 1739 159 50 0 chr10 37284588 37284890 -108304398 + L1PB4 LINE L1 5838 6154 -2 1986 130 7 3 chr10 37285076 37285369 -108303919 + AluSx SINE Alu 1 294 -18 209 171 0 0 chr10 37285372 37285407 -108303881 + G-rich Low_complexity Low_complexity 3 37 0 2816 13 0 0 chr10 37285495 37285796 -108303492 + L1PA2 LINE L1 5855 6155 0 680 208 174 17 chr10 37285908 37286149 -108303139 + MER5C DNA MER1_type 43 321 -3 453 118 49 14 chr10 37286424 37286568 -108302720 + (TA)n Simple_repeat Simple_repeat 1 149 0 902 139 0 29 chr10 37286580 37286717 -108302571 - FLAM_C SINE Alu 0 133 1 632 110 0 0 chr10 37287073 37287155 -108302133 + AluSp SINE Alu 142 223 -90 1018 171 77 124 chr10 37287369 37287695 -108301593 + AluJo SINE Alu 1 312 0 195 42 0 0 chr10 37287738 37287762 -108301526 + (TGG)n Simple_repeat Simple_repeat 1 24 0 1581 226 27 0 chr10 37287863 37288199 -108301089 + L1PA16 LINE L1 5821 6165 -1 463 173 189 8 chr10 37288199 37288326 -108300962 - MIR SINE MIR -85 177 28 242 262 64 52 chr10 37289360 37289532 -108299756 + L2 LINE L2 2562 2735 -579 897 117 0 0 chr10 37289569 37289706 -108299582 + (CA)n Simple_repeat Simple_repeat 2 138 0 213 256 0 0 chr10 37289715 37289758 -108299530 + L2 LINE L2 3210 3252 -20 2097 135 0 0 chr10 37290391 37290688 -108298600 - AluSx SINE Alu -15 297 1 2196 123 0 16 chr10 37291248 37291557 -108297731 + AluSq SINE Alu 1 304 -9 2337 107 0 0 chr10 37291561 37291871 -108297417 + AluSx SINE Alu 1 310 -2 1972 144 10 3 chr10 37292641 37292947 -108296341 - AluJb SINE Alu -4 308 1 210 37 0 0 chr10 37294729 37294756 -108294532 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 1453 149 0 0 chr10 37294903 37295111 -108294177 - AluSx SINE Alu -102 210 3 471 215 28 0 chr10 37295136 37295243 -108294045 + L1M4 LINE L1 2664 2773 -3373 1131 159 5 16 chr10 37295800 37295989 -108293299 + AluJo SINE Alu 1 187 -125 4258 188 5 2 chr10 37295990 37296814 -108292474 + L1PA15 LINE L1 4168 4993 -1153 1077 113 7 0 chr10 37296816 37296958 -108292330 + AluSq/x SINE Alu 1 143 -170 838 124 0 0 chr10 37297060 37297173 -108292115 + AluSp/q SINE Alu 181 293 -20 5289 112 60 70 chr10 37297173 37297522 -108291766 + L1PA15 LINE L1 4980 5331 -834 2119 118 7 0 chr10 37297522 37297811 -108291477 + AluSq SINE Alu 1 291 -22 5289 112 60 70 chr10 37297811 37298643 -108290645 + L1PA15 LINE L1 5331 6152 -13 658 121 0 0 chr10 37298655 37298738 -108290550 + AluJb SINE Alu 178 260 -52 23 0 0 0 chr10 37298742 37298765 -108290523 + AT_rich Low_complexity Low_complexity 1 23 0 228 181 0 42 chr10 37299067 37299139 -108290149 + GA-rich Low_complexity Low_complexity 3 71 0 1708 74 28 0 chr10 37299400 37299615 -108289673 - AluY SINE Alu -6 305 85 279 288 68 25 chr10 37299754 37299872 -108289416 - L2 LINE L2 -9 3263 3141 2303 105 0 10 chr10 37300124 37300428 -108288860 + AluSg SINE Alu 1 301 -9 198 103 0 0 chr10 37300489 37300518 -108288770 + (TCC)n Simple_repeat Simple_repeat 2 30 0 282 167 0 0 chr10 37301925 37301985 -108287303 + (CA)n Simple_repeat Simple_repeat 2 61 0 392 248 23 70 chr10 37302351 37302480 -108286808 + MER5A DNA MER1_type 58 180 -9 1105 188 39 0 chr10 37303033 37303241 -108286047 + MER20 DNA MER1_type 2 217 -2 826 166 0 14 chr10 37303878 37304023 -108285265 + AluJb SINE Alu 163 305 -7 774 139 39 0 chr10 37305264 37305393 -108283895 + MER5A DNA MER1_type 1 134 -55 299 320 51 26 chr10 37305296 37305452 -108283836 - MER5A DNA MER1_type -23 166 7 * 203 274 80 44 chr10 37305497 37305610 -108283678 - MIR SINE MIR -43 219 103 2188 106 0 10 chr10 37306293 37306585 -108282703 - AluSx SINE Alu -23 289 1 21 71 0 0 chr10 37306784 37306826 -108282462 + AT_rich Low_complexity Low_complexity 1 42 0 2117 119 0 3 chr10 37306963 37307256 -108282032 + AluSg SINE Alu 1 292 -18 1749 166 0 33 chr10 37308937 37309239 -108280049 + AluSx SINE Alu 4 295 -17 207 0 0 0 chr10 37310213 37310236 -108279052 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1681 152 39 7 chr10 37310957 37311240 -108278048 - AluJo SINE Alu -20 292 1 1355 174 52 7 chr10 37312857 37313127 -108276161 - AluJo SINE Alu -30 282 1 2121 125 0 20 chr10 37313153 37313457 -108275831 + AluSq SINE Alu 1 298 -15 379 81 210 0 chr10 37313588 37313650 -108275638 + MADE1 DNA Mariner 6 80 0 2011 158 33 6 chr10 37315684 37316020 -108273268 + L1MC1 LINE L1 5979 6323 -10 2492 81 0 0 chr10 37317101 37317409 -108271879 - AluY SINE Alu -3 308 1 228 385 37 9 chr10 37317968 37318077 -108271211 + L2 LINE L2 3200 3311 -2 1591 144 3 87 chr10 37318108 37318209 -108271079 + AluJo SINE Alu 27 135 -177 1886 120 80 0 chr10 37318209 37318485 -108270803 - AluSq SINE Alu -15 298 1 1591 144 3 87 chr10 37318485 37318695 -108270593 + AluJo SINE Alu 135 312 0 2054 98 0 54 chr10 37319376 37319673 -108269615 + AluSx SINE Alu 1 281 -31 246 62 0 0 chr10 37319674 37319706 -108269582 + (TAAG)n Simple_repeat Simple_repeat 4 35 0 201 121 0 0 chr10 37320168 37320201 -108269087 + (A)n Simple_repeat Simple_repeat 1 33 0 2453 73 6 6 chr10 37322232 37322545 -108266743 - AluSp SINE Alu 0 313 1 1912 135 33 10 chr10 37322576 37322880 -108266408 + AluSx SINE Alu 1 311 -1 2252 104 3 0 chr10 37322892 37323189 -108266099 + AluSx SINE Alu 11 308 -4 1498 186 6 48 chr10 37323487 37323798 -108265490 - AluJo SINE Alu -14 298 1 1139 107 6 0 chr10 37324101 37324260 -108265028 - AluSc SINE Alu -18 291 132 2133 130 0 3 chr10 37324260 37324552 -108264736 - AluSc SINE Alu -13 296 6 244 216 54 14 chr10 37325044 37325118 -108264170 + MLT1L LTR MaLR 7 83 -532 272 307 127 0 chr10 37325319 37325469 -108263819 + MLT1L LTR MaLR 423 591 -24 729 230 70 32 chr10 37325616 37325803 -108263485 - MIR SINE MIR -68 194 1 2280 98 13 0 chr10 37325989 37326294 -108262994 - AluSx SINE Alu -3 309 1 22 35 0 0 chr10 37328102 37328131 -108261157 + AT_rich Low_complexity Low_complexity 1 29 0 355 298 70 9 chr10 37329417 37329531 -108259757 + MIR SINE MIR 20 140 -122 23 0 0 0 chr10 37330057 37330080 -108259208 + AT_rich Low_complexity Low_complexity 1 23 0 2376 69 0 0 chr10 37330156 37330444 -108258844 - AluY SINE Alu -22 289 2 320 240 42 0 chr10 37331339 37331435 -108257853 - Charlie1 DNA MER1_type -40 2721 2622 * 512 258 55 23 chr10 37331423 37331640 -108257648 - Charlie1 DNA MER1_type -2524 237 14 1725 181 7 13 chr10 37331759 37332069 -108257219 + AluJo SINE Alu 1 308 -4 224 279 76 0 chr10 37332162 37332241 -108257047 - MIR SINE MIR -20 242 158 695 172 8 16 chr10 37332955 37333077 -108256211 + FLAM_C SINE Alu 1 121 -12 2113 121 3 19 chr10 37333089 37333402 -108255886 + AluSx SINE Alu 4 311 -1 1925 134 0 18 chr10 37333808 37334092 -108255196 + AluJo SINE Alu 9 287 -25 1829 147 3 21 chr10 37334152 37334461 -108254827 + AluSx SINE Alu 4 307 0 405 0 0 0 chr10 37334462 37334507 -108254781 + (CA)n Simple_repeat Simple_repeat 2 46 0 252 213 38 0 chr10 37334652 37334732 -108254556 + MER20B DNA MER1_type 547 629 -154 21 0 0 0 chr10 37334771 37334792 -108254496 + AT_rich Low_complexity Low_complexity 1 21 0 338 181 43 43 chr10 37334846 37334962 -108254326 + MER20B DNA MER1_type 667 782 -1 190 154 0 96 chr10 37335306 37335358 -108253930 + MIR SINE MIR 105 151 -57 708 181 98 0 chr10 37335732 37335865 -108253423 - FRAM SINE Alu -30 146 1 2435 103 0 0 chr10 37336335 37336646 -108252642 + AluSq SINE Alu 1 311 -2 1205 121 59 151 chr10 37338572 37338877 -108250411 - AluJo SINE Alu -15 297 21 891 93 78 0 chr10 37339004 37339133 -108250155 - MER85 DNA T2_type 0 139 1 553 242 166 27 chr10 37339224 37339447 -108249841 - MIR SINE MIR -6 256 3 2221 106 7 0 chr10 37339712 37340015 -108249273 + AluSg SINE Alu 1 305 -5 441 0 0 0 chr10 37340276 37340325 -108248963 + (TG)n Simple_repeat Simple_repeat 2 50 0 1826 83 13 103 chr10 37340325 37340625 -108248663 - AluSg SINE Alu -27 283 11 1986 138 10 21 chr10 37340654 37340944 -108248344 - AluSx SINE Alu -25 287 1 1507 161 54 54 chr10 37340981 37341261 -108248027 + AluJb SINE Alu 1 280 -32 25 0 0 0 chr10 37341881 37341906 -108247382 + AT_rich Low_complexity Low_complexity 1 25 0 2608 42 0 3 chr10 37341953 37342264 -108247024 - AluY SINE Alu -1 310 1 240 382 100 6 chr10 37342305 37342475 -108246813 - MIR3 SINE MIR -4 204 19 808 251 65 30 chr10 37343572 37343835 -108245453 + MLT1J LTR MaLR 200 471 -40 249 108 0 0 chr10 37346252 37346289 -108242999 + (T)n Simple_repeat Simple_repeat 1 37 0 2070 104 10 17 chr10 37347395 37347692 -108241596 + AluSp SINE Alu 1 295 -18 1815 128 78 0 chr10 37347843 37348124 -108241164 - AluSg SINE Alu -1 309 7 266 257 14 0 chr10 37348665 37348735 -108240553 + MER45A DNA AcHobo 79 149 -29 3336 190 60 4 chr10 37348737 37349453 -108239835 + LTR39 LTR ERV1 1 756 -27 495 248 0 9 chr10 37349501 37349610 -108239678 + MER5A DNA MER1_type 7 114 -75 505 182 152 0 chr10 37349684 37349783 -108239505 + AluJb SINE Alu 4 117 -195 1236 115 37 13 chr10 37350013 37350356 -108238932 + MLT1B LTR MaLR 1 390 0 198 0 0 0 chr10 37350367 37350389 -108238899 + (A)n Simple_repeat Simple_repeat 1 22 0 374 282 285 14 chr10 37352134 37352478 -108236810 - L2 LINE L2 0 3313 2877 2122 119 3 0 chr10 37353224 37353510 -108235778 + AluSx SINE Alu 1 287 -25 249 231 50 0 chr10 37353520 37353604 -108235684 - MIR SINE MIR -66 142 63 255 258 38 76 chr10 37353663 37353795 -108235493 - L2 LINE L2 -4 3309 3183 1111 196 20 5 chr10 37355362 37355589 -108233699 + AluJo SINE Alu 84 313 0 866 162 0 0 chr10 37356575 37356711 -108232577 + FLAM_C SINE Alu 1 136 -7 1829 163 46 27 chr10 37357059 37357427 -108231861 - THE1C LTR MaLR 0 375 1 27 49 0 0 chr10 37358007 37358048 -108231240 + AT_rich Low_complexity Low_complexity 1 41 0 29 47 0 0 chr10 37358128 37358171 -108231117 + AT_rich Low_complexity Low_complexity 1 43 0 935 172 0 12 chr10 37358171 37358334 -108230954 - AluJo SINE Alu -25 287 127 22 0 0 0 chr10 37359061 37359083 -108230205 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr10 37359258 37359279 -108230009 + AT_rich Low_complexity Low_complexity 1 21 0 385 198 105 129 chr10 37360612 37360783 -108228505 + L1M4 LINE L1 3980 4145 -2001 1787 150 3 39 chr10 37360783 37361089 -108228199 + AluJb SINE Alu 1 295 -17 385 198 105 129 chr10 37361089 37361165 -108228123 + L1M4 LINE L1 4145 4221 -1925 548 253 67 44 chr10 37361299 37361512 -108227776 + MER97a DNA MER1_type? 11 231 -663 1618 158 0 85 chr10 37361512 37361841 -108227447 - AluJb SINE Alu -11 301 1 548 253 67 44 chr10 37361841 37361852 -108227436 + MER97a DNA MER1_type? 231 240 -654 1403 170 7 73 chr10 37361869 37362169 -108227119 + AluJo SINE Alu 1 280 -32 928 228 49 52 chr10 37362245 37362574 -108226714 + MER97b DNA MER1_type? 278 605 -448 462 226 122 54 chr10 37362927 37363223 -108226065 + MER97c DNA MER1_type? 775 1090 0 472 219 75 37 chr10 37363229 37363416 -108225872 + L1ME3 LINE L1 5718 5911 -259 396 259 17 0 chr10 37363444 37363560 -108225728 + L1ME3 LINE L1 5989 6106 -56 2370 122 36 5 chr10 37364920 37365312 -108223976 + MLT2A1 LTR ERVL 1 404 -40 253 155 41 31 chr10 37365316 37365413 -108223875 + (TA)n Simple_repeat Simple_repeat 2 99 0 22 0 0 0 chr10 37365420 37365442 -108223846 + AT_rich Low_complexity Low_complexity 1 22 0 536 264 76 30 chr10 37365584 37365887 -108223401 + MER97c DNA MER1_type? 774 1090 0 2526 70 0 3 chr10 37365911 37366223 -108223065 - AluY SINE Alu 0 311 1 511 134 12 0 chr10 37366223 37366305 -108222983 + MER66B LTR ERV1 404 486 0 893 133 0 22 chr10 37368343 37368478 -108220810 + FLAM_C SINE Alu 2 133 0 2449 80 3 0 chr10 37368510 37368809 -108220479 + AluSc SINE Alu 1 300 -9 183 42 0 0 chr10 37369731 37369755 -108219533 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 541 167 31 0 chr10 37369759 37369855 -108219433 + MER45A DNA AcHobo 80 178 0 843 243 97 8 chr10 37370260 37370357 -108218931 - MER2 DNA MER2_type 0 345 258 2367 87 3 0 chr10 37370357 37370656 -108218632 - AluSx SINE Alu -12 300 1 843 243 97 8 chr10 37370656 37370825 -108218463 - MER2 DNA MER2_type -87 258 55 1161 195 42 35 chr10 37371369 37371630 -108217658 - AluJo SINE Alu -16 296 34 2472 52 0 52 chr10 37373622 37373948 -108215340 - AluY SINE Alu -2 309 1 25 51 0 0 chr10 37374086 37374125 -108215163 + AT_rich Low_complexity Low_complexity 1 39 0 257 294 64 0 chr10 37374437 37374546 -108214742 + MIR SINE MIR 120 235 -27 4917 168 65 36 chr10 37376511 37376719 -108212569 + L1MA5 LINE L1 4533 4734 -1566 2252 86 0 40 chr10 37376719 37377043 -108212245 + AluY SINE Alu 1 311 0 4917 168 65 36 chr10 37377043 37377879 -108211409 + L1MA5 LINE L1 4734 5545 -755 1998 115 14 14 chr10 37377879 37378165 -108211123 + AluSx SINE Alu 21 306 -6 4917 168 65 36 chr10 37378165 37378478 -108210810 + L1MA5 LINE L1 5545 5848 -452 1527 191 31 7 chr10 37378478 37378772 -108210516 + AluJo SINE Alu 1 301 -11 4917 168 65 36 chr10 37378772 37378796 -108210492 + L1MA5 LINE L1 5848 5870 -430 2092 115 10 13 chr10 37378796 37379109 -108210179 + AluSx SINE Alu 1 312 0 4917 168 65 36 chr10 37379109 37379440 -108209848 + L1MA5 LINE L1 5870 6300 0 22 56 0 0 chr10 37379672 37379708 -108209580 + AT_rich Low_complexity Low_complexity 1 36 0 2281 121 3 0 chr10 37380867 37381172 -108208116 - AluSx SINE Alu -6 306 1 222 296 171 23 chr10 37381512 37381688 -108207600 - L3 LINE CR1 -12 1565 1364 181 0 0 65 chr10 37382992 37383023 -108206265 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 1506 140 13 4 chr10 37383089 37383318 -108205970 - AluSx SINE Alu -81 231 1 228 67 0 0 chr10 37384637 37384667 -108204621 + (T)n Simple_repeat Simple_repeat 1 30 0 2218 101 3 3 chr10 37385520 37385817 -108203471 + AluY SINE Alu 1 297 -14 2347 91 7 0 chr10 37387452 37387749 -108201539 + AluSp SINE Alu 1 299 -14 251 256 0 44 chr10 37388160 37388250 -108201038 + CT-rich Low_complexity Low_complexity 2 87 0 1614 167 23 49 chr10 37388844 37389149 -108200139 - AluJo SINE Alu -15 297 1 1559 185 65 96 chr10 37389156 37389636 -108199652 + MLT1C LTR MaLR 1 465 -2 532 230 31 56 chr10 37390232 37390393 -108198895 - MER58B DNA MER1_type -1 340 184 1865 154 23 7 chr10 37392265 37392564 -108196724 - AluJb SINE Alu -7 305 2 351 0 0 0 chr10 37392624 37392663 -108196625 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 1564 174 4 4 chr10 37392677 37392936 -108196352 - AluJo SINE Alu -53 259 1 1579 187 27 0 chr10 37393456 37393718 -108195570 - AluJb SINE Alu -43 269 1 1754 136 80 0 chr10 37393821 37394085 -108195203 + AluSg SINE Alu 1 285 -25 3760 197 33 46 chr10 37394893 37395747 -108193541 - L1MA7 LINE L1 -39 6252 5410 394 63 63 0 chr10 37397860 37397939 -108191349 + GA-rich Low_complexity Low_complexity 2 85 0 1839 111 111 7 chr10 37400937 37401216 -108188072 + AluSg SINE Alu 3 310 0 1382 182 14 43 chr10 37401397 37401677 -108187611 + AluJo SINE Alu 1 272 -40 248 0 31 0 chr10 37401677 37401709 -108187579 + (CA)n Simple_repeat Simple_repeat 2 34 0 1368 124 0 0 chr10 37402156 37402334 -108186954 + AluSx SINE Alu 1 178 -134 1504 138 5 0 chr10 37402336 37402560 -108186728 + AluSg/x SINE Alu 86 310 0 275 264 33 0 chr10 37402573 37402664 -108186624 + L1MC/D LINE L1 5559 5652 -469 1649 186 16 7 chr10 37405472 37405778 -108183510 + AluJo SINE Alu 1 309 -3 2059 144 3 0 chr10 37406688 37406987 -108182301 - AluJo SINE Alu -12 300 1 437 33 0 17 chr10 37406995 37407055 -108182233 + (TTTTA)n Simple_repeat Simple_repeat 2 60 0 2099 131 0 0 chr10 37407058 37407340 -108181948 - AluSx SINE Alu -30 282 1 906 158 5 113 chr10 37408517 37408738 -108180550 - AluJo SINE Alu -29 283 87 322 248 50 30 chr10 37409074 37409175 -108180113 + L2 LINE L2 3191 3293 -20 1570 149 93 50 chr10 37410271 37410594 -108178694 - MER1B DNA MER1_type 0 337 1 621 217 17 0 chr10 37411002 37411117 -108178171 + FLAM_C SINE Alu 5 121 -22 5786 154 99 6 chr10 37411133 37411434 -108177854 - Tigger3b DNA MER2_type -1833 1195 923 200 35 35 0 chr10 37411434 37411463 -108177825 + (TGAG)n Simple_repeat Simple_repeat 1 30 0 5786 154 99 6 chr10 37411463 37412255 -108177033 - Tigger3b DNA MER2_type -2105 923 1 2508 83 3 0 chr10 37412564 37412876 -108176412 + AluSp SINE Alu 1 313 0 627 207 8 8 chr10 37413917 37414038 -108175250 - FLAM_A SINE Alu -12 121 1 1074 156 12 0 chr10 37415473 37415646 -108173642 + FAM SINE Alu 1 175 0 533 252 84 0 chr10 37416138 37416293 -108172995 - MIR SINE MIR -74 188 21 546 169 127 17 chr10 37418956 37419074 -108170214 + FLAM_C SINE Alu 2 132 -1 2325 92 0 0 chr10 37419359 37419669 -108169619 - AluSx SINE Alu 0 310 1 2510 67 0 0 chr10 37419695 37419993 -108169295 + AluY SINE Alu 1 298 -13 198 103 0 0 chr10 37420352 37420381 -108168907 + (CTGGGG)n Simple_repeat Simple_repeat 6 34 0 239 236 394 0 chr10 37420461 37420669 -108168619 - LTR50 LTR ERVL -505 290 1 258 331 65 0 chr10 37420670 37420809 -108168479 + MIR SINE MIR 112 259 -3 394 288 45 8 chr10 37421178 37421310 -108167978 - L1MC5 LINE L1 -66 7895 7759 24 0 0 0 chr10 37422712 37422736 -108166552 + AT_rich Low_complexity Low_complexity 1 24 0 5580 105 57 6 chr10 37423982 37424417 -108164871 + L1MA3 LINE L1 5394 5805 -500 1988 141 10 0 chr10 37424417 37424716 -108164572 + AluSx SINE Alu 1 302 -10 5580 105 57 6 chr10 37424716 37425007 -108164281 + L1MA3 LINE L1 5805 6174 -131 1833 136 0 11 chr10 37425007 37425279 -108164009 + AluSx SINE Alu 1 269 -43 5580 105 57 6 chr10 37425279 37425419 -108163869 + L1MA3 LINE L1 6174 6305 0 2290 104 0 0 chr10 37426030 37426327 -108162961 - AluSg SINE Alu -13 297 1 2053 119 11 0 chr10 37426327 37426612 -108162676 - AluSx SINE Alu -24 288 1 240 200 0 0 chr10 37426816 37426871 -108162417 + GA-rich Low_complexity Low_complexity 2 56 0 22 0 0 0 chr10 37426915 37426937 -108162351 + AT_rich Low_complexity Low_complexity 1 22 0 1188 121 0 76 chr10 37427158 37427381 -108161907 + AluSp SINE Alu 102 307 -6 1943 123 18 0 chr10 37427386 37427663 -108161625 + AluSg SINE Alu 1 282 -28 623 46 11 0 chr10 37427667 37427754 -108161534 + (CAGAA)n Simple_repeat Simple_repeat 2 89 0 1237 192 55 48 chr10 37427764 37428056 -108161232 + AluJo SINE Alu 1 294 -18 27 0 0 0 chr10 37428493 37428520 -108160768 + GC_rich Low_complexity Low_complexity 1 27 0 207 220 0 0 chr10 37428623 37428673 -108160615 + (CATA)n Simple_repeat Simple_repeat 2 51 0 1873 127 4 4 chr10 37428712 37428980 -108160308 + AluSx SINE Alu 1 268 -44 860 151 0 0 chr10 37430517 37430643 -108158645 + FLAM_C SINE Alu 1 126 -17 445 148 99 0 chr10 37430744 37430825 -108158463 - L2 LINE L2 0 3313 3225 3912 108 41 20 chr10 37430833 37431437 -108157851 + L1PB4 LINE L1 5540 6156 0 202 294 98 39 chr10 37432233 37432335 -108156953 + MIR3 SINE MIR 49 156 -52 195 254 0 55 chr10 37432389 37432444 -108156844 - MER5B DNA MER1_type -68 110 59 1367 167 29 12 chr10 37433760 37434006 -108155282 + AluJo SINE Alu 42 291 -21 833 237 0 0 chr10 37434363 37434515 -108154773 + FRAM SINE Alu 1 152 -24 1407 146 26 0 chr10 37435606 37435832 -108153456 + AluSg/x SINE Alu 70 301 -9 1116 174 167 3 chr10 37436027 37436314 -108152974 + MER66A LTR ERV1 84 417 -61 2117 130 3 0 chr10 37536644 37536937 -108052351 - AluSx SINE Alu -13 299 6 2186 97 38 0 chr10 37537182 37537471 -108051817 - AluSp SINE Alu -13 300 1 239 53 0 26 chr10 37537915 37537953 -108051335 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 395 165 25 0 chr10 37537953 37538032 -108051256 + MER53 DNA DNA 29 109 -80 1684 193 23 10 chr10 37538035 37538341 -108050947 + AluJo SINE Alu 3 312 0 462 186 101 23 chr10 37538405 37538534 -108050754 - MER53 DNA DNA -49 140 2 243 294 44 0 chr10 37539327 37539395 -108049893 - MIR SINE MIR -72 190 120 198 0 0 0 chr10 37539441 37539463 -108049825 + (TTTTG)n Simple_repeat Simple_repeat 4 25 0 801 126 0 0 chr10 37539470 37539581 -108049707 - FLAM_C SINE Alu -32 111 1 40 21 0 0 chr10 37539602 37539649 -108049639 + AT_rich Low_complexity Low_complexity 1 47 0 2257 114 0 7 chr10 37539793 37540100 -108049188 - AluSx SINE Alu -7 305 1 282 119 0 0 chr10 37540228 37540314 -108048974 - AluJo SINE Alu 0 329 244 252 256 25 100 chr10 37540314 37540474 -108048814 + LTR2 LTR ERV1 13 160 -289 * 911 163 5 37 chr10 37540470 37540660 -108048628 + LTR2 LTR ERV1 266 449 0 42634 79 20 9 chr10 37540660 37546579 -108042709 + HERVE LTR ERV1 1 6022 -1791 391 210 0 0 chr10 37546616 37546697 -108042591 + HERVE LTR ERV1 6815 6895 -1 319 263 17 103 chr10 37546697 37546872 -108042416 + LTR2 LTR ERV1 1 160 -289 * 979 161 5 16 chr10 37546868 37547054 -108042234 + LTR2 LTR ERV1 266 449 0 1027 163 47 29 chr10 37547054 37547226 -108042062 - AluJo SINE Alu -71 241 67 11002 65 17 7 chr10 37547362 37548735 -108040553 + SVA Other Other 1 1386 0 1756 188 27 0 chr10 37548901 37549193 -108040095 + AluJb SINE Alu 1 300 -12 198 0 0 0 chr10 37549307 37549329 -108039959 + (T)n Simple_repeat Simple_repeat 1 22 0 982 115 72 0 chr10 37549380 37549549 -108039739 + AluSg/x SINE Alu 137 315 0 358 338 37 59 chr10 37549783 37550055 -108039233 - L2 LINE L2 -508 2806 2541 2310 113 0 3 chr10 37550534 37550835 -108038453 - AluSx SINE Alu -12 300 1 1980 159 0 3 chr10 37551346 37551642 -108037646 - AluJo SINE Alu -17 295 1 1939 141 16 22 chr10 37551992 37552305 -108036983 + AluJo SINE Alu 1 311 -1 2224 107 14 0 chr10 37552305 37552595 -108036693 - AluSx SINE Alu -17 295 2 473 199 145 64 chr10 37553114 37553301 -108035987 - L1ME3A LINE L1 -308 5839 5635 416 189 0 14 chr10 37553340 37553414 -108035874 - AluJo SINE Alu -149 163 91 1416 239 84 38 chr10 37553446 37553799 -108035489 - L1ME3A LINE L1 -511 5634 5298 2922 7 0 0 chr10 37553799 37554108 -108035180 - AluYa5 SINE Alu -2 309 1 1416 239 84 38 chr10 37554108 37554508 -108034780 - L1ME3A LINE L1 -847 5298 4823 2382 85 0 3 chr10 37554508 37554801 -108034487 + AluSg SINE Alu 1 292 -18 1416 239 84 38 chr10 37554801 37554915 -108034373 - L1ME3A LINE L1 -1322 4823 4716 2165 140 0 13 chr10 37554960 37555275 -108034013 - AluSq SINE Alu -2 311 1 1223 136 11 0 chr10 37555278 37555455 -108033833 - FRAM SINE Alu -4 172 1 2275 105 0 3 chr10 37555468 37555763 -108033525 + AluSc SINE Alu 1 294 -15 1015 287 130 9 chr10 37555763 37556303 -108032985 - L1ME3A LINE L1 -1507 4622 4018 347 254 67 53 chr10 37556302 37556511 -108032777 - L1ME3A LINE L1 -4957 1353 1142 * 808 137 0 8 chr10 37556578 37556709 -108032579 + MER3 DNA MER1_type 80 209 0 351 138 17 0 chr10 37556666 37556724 -108032564 - MER3 DNA MER1_type -119 90 32 * 459 185 62 14 chr10 37556739 37556885 -108032403 - L1ME3A LINE L1 -5059 1060 908 1009 234 121 94 chr10 37556895 37556944 -108032344 + LTR41 LTR ERVL 1 47 -726 2160 123 7 0 chr10 37556944 37557244 -108032044 + AluSq SINE Alu 1 302 -11 1009 234 121 94 chr10 37557244 37557563 -108031725 + LTR41 LTR ERVL 47 356 -417 2306 116 72 17 chr10 37557563 37557908 -108031380 - THE1B LTR MaLR 0 364 1 1009 234 121 94 chr10 37557908 37558142 -108031146 + LTR41 LTR ERVL 356 582 -191 2336 94 0 31 chr10 37558142 37558460 -108030828 - AluSq SINE Alu -5 308 1 1009 234 121 94 chr10 37558460 37558491 -108030797 + LTR41 LTR ERVL 582 611 -162 1688 188 14 3 chr10 37558491 37558783 -108030505 - AluJb SINE Alu -17 295 1 1009 234 121 94 chr10 37558783 37558858 -108030430 + LTR41 LTR ERVL 611 772 -1 1462 205 26 43 chr10 37558888 37559061 -108030227 - AluJo SINE Alu -15 297 130 2168 140 16 0 chr10 37559061 37559368 -108029920 + AluSx SINE Alu 1 312 0 1462 205 26 43 chr10 37559368 37559496 -108029792 - AluJo SINE Alu -182 130 1 301 322 81 7 chr10 37559552 37559701 -108029587 - L1ME3A LINE L1 -5278 841 682 2265 114 3 19 chr10 37559713 37560030 -108029258 - AluSx SINE Alu 0 312 1 296 262 168 19 chr10 37560050 37560157 -108029131 + L2 LINE L2 3150 3272 0 201 200 0 22 chr10 37560529 37560574 -108028714 + (TATG)n Simple_repeat Simple_repeat 4 47 0 345 307 64 7 chr10 37560815 37560955 -108028333 + L1M4 LINE L1 3503 3650 -2496 226 252 235 0 chr10 37560978 37561097 -108028191 + L1M4 LINE L1 4062 4208 -1938 2191 114 7 0 chr10 37561532 37561821 -108027467 + AluSx SINE Alu 3 293 -19 866 125 28 0 chr10 37561822 37561966 -108027322 + L1MA7 LINE L1 6144 6291 0 2318 99 7 0 chr10 37561971 37562275 -108027013 + AluY SINE Alu 1 306 -5 2081 120 3 27 chr10 37562461 37562760 -108026528 - AluSq SINE Alu -21 292 1 1766 177 3 0 chr10 37562760 37563043 -108026245 + AluJo SINE Alu 24 307 -5 264 250 22 0 chr10 37563062 37563154 -108026134 + L1MEc LINE L1 2207 2300 -4096 321 100 0 0 chr10 37563154 37563204 -108026084 + (CA)n Simple_repeat Simple_repeat 1 50 0 396 0 0 0 chr10 37563731 37563775 -108025513 + (CA)n Simple_repeat Simple_repeat 2 45 0 690 135 0 0 chr10 37563936 37564032 -108025256 + AluS SINE Alu 2 97 -216 286 54 0 0 chr10 37564032 37564069 -108025219 - Alu SINE Alu -264 38 2 436 345 44 48 chr10 37564069 37564362 -108024926 - HAL1 LINE L1 -1101 1406 1115 2363 84 7 7 chr10 37564435 37564744 -108024544 - AluSc SINE Alu 0 309 1 2310 105 7 3 chr10 37564798 37565103 -108024185 + AluSx SINE Alu 1 306 -6 615 120 0 37 chr10 37565114 37565222 -108024066 - L1PB4 LINE L1 0 6156 6053 236 288 0 38 chr10 37565938 37566018 -108023270 - MIR SINE MIR -13 249 173 199 361 24 12 chr10 37567255 37567338 -108021950 + L3 LINE CR1 1254 1337 -240 198 0 0 0 chr10 37567410 37567432 -108021856 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 23 0 0 0 chr10 37567759 37567782 -108021506 + AT_rich Low_complexity Low_complexity 1 23 0 2254 161 13 0 chr10 37567783 37568168 -108021120 - MER57A LTR ERV1 -13 390 1 1811 145 25 4 chr10 37568168 37568444 -108020844 + AluJo SINE Alu 22 303 -9 455 197 53 23 chr10 37568618 37568750 -108020538 - Charlie4 DNA MER1_type -37 1924 1789 2291 119 7 0 chr10 37568750 37569060 -108020228 + AluSx SINE Alu 1 312 0 688 161 81 8 chr10 37570046 37570170 -108019118 + FLAM_C SINE Alu 1 133 0 648 172 0 64 chr10 37570170 37570234 -108019054 - L2 LINE L2 -784 2530 2463 1793 102 109 0 chr10 37570234 37570500 -108018788 + AluSx SINE Alu 1 295 -17 648 172 0 64 chr10 37570500 37570592 -108018696 - L2 LINE L2 -851 2463 2384 944 181 0 28 chr10 37570593 37570770 -108018518 - MLT1A1 LTR MaLR 0 365 194 1464 244 7 0 chr10 37570770 37571077 -108018211 + ERVL-B1 LTR ERVL 443 751 -5013 * 5339 134 75 19 chr10 37571076 37571939 -108017349 + ERVL-B1 LTR ERVL 4766 5687 -77 2280 110 10 3 chr10 37571939 37572238 -108017050 - AluSx SINE Alu -11 301 1 5339 134 75 19 chr10 37572238 37572314 -108016974 + ERVL-B1 LTR ERVL 5687 5757 -7 1860 199 80 16 chr10 37572314 37572750 -108016538 + MLT2B1 LTR ERVL 1 464 -56 2070 113 0 24 chr10 37572751 37573043 -108016245 + AluSq SINE Alu 1 285 -28 835 93 0 0 chr10 37572935 37573043 -108016245 + AluSp/q SINE Alu 178 315 0 216 0 67 0 chr10 37573043 37573073 -108016215 + (TAAA)n Simple_repeat Simple_repeat 2 180 0 2037 164 11 20 chr10 37573088 37573435 -108015853 - MER2 DNA MER2_type 0 344 1 207 204 0 0 chr10 37573435 37573484 -108015804 + (TG)n Simple_repeat Simple_repeat 2 50 0 259 152 0 0 chr10 37573489 37573535 -108015753 + MLT2B1 LTR ERVL 459 504 -11 2408 78 7 0 chr10 37574268 37574563 -108014725 + AluSp SINE Alu 1 297 -16 1072 161 6 0 chr10 37574563 37574731 -108014557 + AluSg/x SINE Alu 134 302 -10 360 0 0 0 chr10 37574869 37574909 -108014379 + (TG)n Simple_repeat Simple_repeat 1 40 0 1600 129 12 17 chr10 37575026 37575267 -108014021 - AluSx SINE Alu -72 240 1 1860 97 70 8 chr10 37575806 37576065 -108013223 + AluSc SINE Alu 1 275 -34 307 275 129 38 chr10 37576398 37576638 -108012650 + L2 LINE L2 2267 2528 -786 2183 101 7 0 chr10 37576678 37576966 -108012322 + AluSx SINE Alu 1 290 -22 2171 107 7 3 chr10 37577016 37577307 -108011981 + AluSx SINE Alu 1 292 -20 271 330 117 10 chr10 37577691 37577794 -108011494 + L2 LINE L2 3153 3266 -6 2345 95 0 3 chr10 37578093 37578398 -108010890 - AluSp SINE Alu -9 304 1 244 322 148 20 chr10 37578844 37578993 -108010295 + MIR SINE MIR 45 212 -50 2139 127 0 0 chr10 37579107 37579399 -108009889 + AluJb SINE Alu 7 298 -14 286 217 196 0 chr10 37580343 37580486 -108008802 + L1MC5 LINE L1 7611 7781 -180 704 154 27 0 chr10 37580510 37580620 -108008668 + FLAM_C SINE Alu 5 117 -26 302 0 26 0 chr10 37580743 37580781 -108008507 + (TA)n Simple_repeat Simple_repeat 2 40 0 367 297 55 110 chr10 37582246 37582536 -108006752 + L2 LINE L2 2999 3272 0 970 142 11 158 chr10 37582669 37582897 -108006391 - AluJo SINE Alu -90 222 35 2275 104 0 0 chr10 37582897 37583194 -108006094 + AluSx SINE Alu 3 299 -13 970 142 11 158 chr10 37583194 37583225 -108006063 - AluJo SINE Alu -277 35 1 983 162 0 0 chr10 37583613 37583767 -108005521 - AluSg/x SINE Alu -12 298 145 224 323 0 0 chr10 37584518 37584580 -108004708 + MER5A DNA MER1_type 127 188 -1 2402 66 0 16 chr10 37584618 37584921 -108004367 + AluY SINE Alu 1 298 -13 25 31 0 0 chr10 37585364 37585396 -108003892 + AT_rich Low_complexity Low_complexity 1 32 0 1895 179 0 0 chr10 37586110 37586417 -108002871 + AluSx SINE Alu 1 307 -5 2188 95 16 30 chr10 37586566 37586871 -108002417 + AluSq SINE Alu 1 301 -12 2282 123 0 0 chr10 37588204 37588513 -108000775 + AluSx SINE Alu 1 309 -3 2084 145 3 0 chr10 37588972 37589268 -108000020 + AluSx SINE Alu 2 298 -14 201 74 0 0 chr10 37589435 37589462 -107999826 + (A)n Simple_repeat Simple_repeat 1 27 0 2233 65 39 29 chr10 37589568 37589874 -107999414 + AluY SINE Alu 1 309 -2 2547 53 3 0 chr10 37590041 37590341 -107998947 + AluSp SINE Alu 1 301 -12 779 260 67 24 chr10 37591331 37591787 -107997501 + L1MC5 LINE L1 7139 7495 -519 229 203 0 62 chr10 37591756 37591820 -107997468 + L1MC4 LINE L1 7513 7572 -470 * 757 110 9 0 chr10 37592523 37592632 -107996656 - FLAM_C SINE Alu -9 134 25 990 70 0 0 chr10 37592806 37592935 -107996353 - AluY SINE Alu -2 309 181 246 290 12 24 chr10 37592959 37593002 -107996286 + (TA)n Simple_repeat Simple_repeat 2 44 -124 219 69 0 0 chr10 37593002 37593031 -107996257 + (CA)n Simple_repeat Simple_repeat 2 30 0 246 290 12 24 chr10 37593031 37593156 -107996132 + (TA)n Simple_repeat Simple_repeat 44 168 0 205 262 0 16 chr10 37593155 37593216 -107996072 + CT-rich Low_complexity Low_complexity 3 62 0 * 250 102 153 17 chr10 37593224 37593283 -107996005 - FLAM_A SINE Alu -46 87 21 * 298 280 0 15 chr10 37593240 37593349 -107995939 + AluJb SINE Alu 165 252 -45 897 110 0 0 chr10 37593349 37593485 -107995803 + (AGGTG)n Simple_repeat Simple_repeat 3 138 0 278 368 75 49 chr10 37593496 37593762 -107995526 + L2 LINE L2 2996 3268 -4 406 275 28 18 chr10 37593772 37593881 -107995407 - MIR SINE MIR -125 137 28 931 165 76 89 chr10 37594201 37594324 -107994964 + L1MA9 LINE L1 6000 6123 -189 2368 90 7 0 chr10 37594324 37594624 -107994664 + AluSg SINE Alu 1 302 -8 931 165 76 89 chr10 37594624 37594815 -107994473 + L1MA9 LINE L1 6123 6310 -2 1957 130 3 3 chr10 37595410 37595694 -107993594 - AluJb SINE Alu -28 284 1 249 268 18 0 chr10 37596855 37596911 -107992377 - MIR3 SINE MIR -28 180 124 1339 32 0 0 chr10 37598396 37598552 -107990736 - L1PA3 LINE L1 -3 6152 5997 2388 80 0 0 chr10 37598703 37599002 -107990286 - AluY SINE Alu -11 300 2 304 114 0 0 chr10 37599618 37599662 -107989626 + Alu SINE Alu 1 44 -257 2149 123 3 0 chr10 37600615 37600916 -107988372 - AluSx SINE Alu -10 302 1 841 175 24 12 chr10 37601544 37601710 -107987578 - FAM SINE Alu -7 168 1 1731 192 0 0 chr10 37601956 37602242 -107987046 - AluJb SINE Alu -26 286 1 902 132 0 0 chr10 37602307 37602436 -107986852 + FLAM_A SINE Alu 2 130 -3 1074 133 6 6 chr10 37603281 37603446 -107985842 - FRAM SINE Alu -12 164 1 26 0 0 0 chr10 37604560 37604586 -107984702 + AT_rich Low_complexity Low_complexity 1 26 0 2217 92 0 22 chr10 37605013 37605330 -107983958 + AluSg SINE Alu 1 310 0 539 232 190 9 chr10 37607159 37607370 -107981918 - L1MC4a LINE L1 -1947 5861 5613 267 214 48 36 chr10 37607423 37607507 -107981781 - L1MC4a LINE L1 -2304 5504 5420 * 1734 223 77 64 chr10 37607504 37608158 -107981130 - L1ME3A LINE L1 0 6170 5509 1487 169 0 4 chr10 37608304 37608546 -107980742 - AluJb SINE Alu -23 289 49 1191 269 16 13 chr10 37608552 37608999 -107980289 - L1ME3A LINE L1 -965 5181 4734 2149 118 3 0 chr10 37609123 37609420 -107979868 + AluSg SINE Alu 1 298 -12 2063 119 14 0 chr10 37609431 37609716 -107979572 + AluSx SINE Alu 1 289 -23 27 29 0 0 chr10 37609716 37609750 -107979538 + AT_rich Low_complexity Low_complexity 1 34 0 2417 81 0 7 chr10 37609803 37610110 -107979178 + AluSg SINE Alu 1 305 -5 30 45 0 0 chr10 37610123 37610167 -107979121 + AT_rich Low_complexity Low_complexity 1 44 0 1976 137 35 0 chr10 37611142 37611427 -107977861 + AluSx SINE Alu 1 295 -17 2246 109 3 3 chr10 37611430 37611743 -107977545 + AluSq SINE Alu 1 313 0 1592 140 3 88 chr10 37612222 37612565 -107976723 - MER1B DNA MER1_type 0 339 26 346 197 0 0 chr10 37612567 37612628 -107976660 - MER1B DNA MER1_type -276 61 1 1577 195 10 7 chr10 37613094 37613396 -107975892 - AluJb SINE Alu -9 303 1 406 116 14 0 chr10 37613471 37613540 -107975748 - L1MB8 LINE L1 -16 6162 6093 1393 196 48 11 chr10 37613552 37613910 -107975378 - L1MB4 LINE L1 -1 6179 5809 2284 180 18 49 chr10 37613914 37614673 -107974615 + MER21A LTR ERV1 1 924 -7 307 282 0 0 chr10 37614684 37614769 -107974519 - L1MB4 LINE L1 -375 5808 5724 1649 179 58 3 chr10 37615344 37615635 -107973653 + AluJo SINE Alu 1 307 -5 624 182 25 0 chr10 37616868 37616989 -107972299 + AluJo/FLAM SINE Alu 3 126 -176 1762 140 19 35 chr10 37616991 37617306 -107971982 + AluJo SINE Alu 1 310 -2 589 167 29 88 chr10 37618104 37618169 -107971119 + L1MC5 LINE L1 6962 7029 -932 2033 131 0 3 chr10 37618169 37618497 -107970791 + AluSx SINE Alu 1 327 0 589 167 29 88 chr10 37618497 37618634 -107970654 + L1MC5 LINE L1 7029 7153 -808 2161 105 7 0 chr10 37618888 37619183 -107970105 + AluY SINE Alu 1 297 -14 1904 121 45 3 chr10 37619195 37619484 -107969804 + AluSx SINE Alu 1 301 -11 368 265 31 0 chr10 37619618 37619716 -107969572 + MIR SINE MIR 134 234 -28 222 305 168 0 chr10 37619741 37619836 -107969452 + MIR SINE MIR 114 224 -38 195 204 0 0 chr10 37621043 37621087 -107968201 + A-rich Low_complexity Low_complexity 1 44 0 2244 101 0 10 chr10 37621600 37621898 -107967390 + AluSc SINE Alu 1 295 -14 721 280 79 57 chr10 37622180 37622593 -107966695 - L1ME3A LINE L1 -306 5864 5462 2402 71 0 0 chr10 37622593 37622889 -107966399 + AluY SINE Alu 1 296 -15 2304 52 7 0 chr10 37622891 37623196 -107966092 + AluY SINE Alu 1 311 0 721 280 79 57 chr10 37623196 37623371 -107965917 - L1ME3A LINE L1 -708 5462 5260 286 255 167 0 chr10 37624020 37624122 -107965166 + L2 LINE L2 3195 3313 0 233 226 99 16 chr10 37624129 37624177 -107965111 + L1ME LINE L1 5694 5737 -384 2465 76 0 0 chr10 37624177 37624478 -107964810 + AluY SINE Alu 5 305 -6 233 226 99 16 chr10 37624478 37624540 -107964748 + L1ME LINE L1 5737 5819 -302 225 280 27 13 chr10 37624793 37624868 -107964420 - L1ME4a LINE L1 -86 6035 5960 319 273 211 16 chr10 37625355 37625483 -107963805 + L2 LINE L2 3119 3271 -1 24 0 0 0 chr10 37626251 37626275 -107963013 + AT_rich Low_complexity Low_complexity 1 24 0 747 141 33 0 chr10 37627010 37627131 -107962157 + FLAM_C SINE Alu 1 125 -8 342 316 95 52 chr10 37627452 37627800 -107961488 + L2 LINE L2 2951 3313 0 545 269 53 25 chr10 37627906 37628123 -107961165 - MIR SINE MIR 0 262 31 314 292 100 8 chr10 37628118 37628248 -107961040 - L2 LINE L2 -7 3306 3165 * 2364 82 20 7 chr10 37628934 37629239 -107960049 + AluSx SINE Alu 1 309 -3 2103 100 7 14 chr10 37629371 37629660 -107959628 + AluSx SINE Alu 1 287 -25 5256 122 30 14 chr10 37629682 37629752 -107959536 + Tigger1 DNA MER2_type 1577 1644 -774 2489 168 75 103 chr10 37629752 37630467 -107958821 + LTR34 LTR ERV1 1 695 -4 5256 122 30 14 chr10 37630467 37631225 -107958063 + Tigger1 DNA MER2_type 1644 2418 0 469 270 74 20 chr10 37631297 37631445 -107957843 + MIR SINE MIR 13 168 -94 1576 176 26 26 chr10 37631537 37631849 -107957439 + AluJo SINE Alu 1 312 0 1984 108 52 3 chr10 37632751 37633038 -107956250 + AluSx SINE Alu 1 301 -11 852 153 0 29 chr10 37633330 37633467 -107955821 - FLAM_C SINE Alu 0 133 1 379 231 8 66 chr10 37633534 37633655 -107955633 - MIR SINE MIR -104 158 45 1586 137 4 24 chr10 37634149 37634404 -107954884 + AluJb SINE Alu 41 290 -22 186 294 20 0 chr10 37635244 37635295 -107953993 + MIR SINE MIR 63 114 -148 23 0 0 0 chr10 37635309 37635332 -107953956 + AT_rich Low_complexity Low_complexity 1 23 0 261 156 26 39 chr10 37636192 37636269 -107953019 + (TTTA)n Simple_repeat Simple_repeat 2 77 0 895 128 0 0 chr10 37636277 37636394 -107952894 - FLAM_C SINE Alu -18 125 9 594 127 0 0 chr10 37636819 37636898 -107952390 + AluSc SINE Alu 2 80 -229 2211 102 6 13 chr10 37636898 37637211 -107952077 + AluY SINE Alu 1 311 0 1729 104 4 0 chr10 37637211 37637439 -107951849 + AluSc SINE Alu 71 301 -8 28 0 0 0 chr10 37637817 37637845 -107951443 + AT_rich Low_complexity Low_complexity 1 28 0 2112 96 21 7 chr10 37637867 37638158 -107951130 - AluSx SINE Alu -17 295 1 1066 109 64 0 chr10 37638566 37638722 -107950566 + AluSp SINE Alu 141 306 -7 1853 151 24 3 chr10 37639027 37639318 -107949970 + AluSx SINE Alu 1 297 -15 2549 47 0 10 chr10 37639385 37639686 -107949602 + AluY SINE Alu 1 298 -13 1550 158 20 4 chr10 37639698 37639944 -107949344 + AluSq SINE Alu 1 250 -63 2065 127 7 3 chr10 37640426 37640726 -107948562 - AluSq SINE Alu -12 301 1 2047 144 0 13 chr10 37640816 37641128 -107948160 + AluJo SINE Alu 1 308 -4 265 285 30 67 chr10 37641592 37641757 -107947531 + MIR SINE MIR 48 206 -56 255 326 68 7 chr10 37642055 37642202 -107947086 - Charlie8 DNA MER1_type -2190 227 72 968 255 62 39 chr10 37642202 37642586 -107946702 + L2 LINE L2 2916 3308 -5 2475 73 0 19 chr10 37642950 37643267 -107946021 - AluY SINE Alu 0 311 1 2369 81 0 0 chr10 37643932 37644227 -107945061 - AluY SINE Alu -16 295 1 545 211 49 148 chr10 37645011 37645150 -107944138 - MIR SINE MIR 0 262 164 2240 114 3 9 chr10 37645150 37645465 -107943823 - AluSq SINE Alu 0 313 1 545 211 49 148 chr10 37645465 37645609 -107943679 - MIR SINE MIR -98 164 7 315 281 85 0 chr10 37645619 37645701 -107943587 - L2 LINE L2 -17 3296 3208 1785 117 78 11 chr10 37646064 37646346 -107942942 - AluSx SINE Alu -11 301 1 447 19 0 0 chr10 37647195 37647247 -107942041 + (CA)n Simple_repeat Simple_repeat 2 53 0 25 51 0 0 chr10 37647254 37647293 -107941995 + AT_rich Low_complexity Low_complexity 1 39 0 2530 170 67 41 chr10 37647425 37647990 -107941298 + L1MB8 LINE L1 5594 6173 -5 1707 92 4 17 chr10 37648327 37648565 -107940723 + AluY SINE Alu 1 235 -76 1147 190 51 0 chr10 37648571 37648808 -107940480 + L1MB7 LINE L1 5649 5897 -287 477 84 0 0 chr10 37648810 37648881 -107940407 + AluY SINE Alu 237 307 -2 1204 146 5 0 chr10 37648901 37649086 -107940202 + AluSg/x SINE Alu 127 312 0 2437 90 3 0 chr10 37649095 37649405 -107939883 + AluSp SINE Alu 1 311 -2 282 235 241 60 chr10 37649420 37649586 -107939702 + L1MC5 LINE L1 7731 7926 -35 2193 105 3 20 chr10 37649855 37650160 -107939128 - AluSp SINE Alu -13 300 1 1741 145 119 21 chr10 37650584 37650921 -107938367 - Tigger7 DNA MER2_type 0 2587 2218 3762 182 38 34 chr10 37650921 37651681 -107937607 - Tigger7 DNA MER2_type -1717 770 8 1721 142 40 4 chr10 37651993 37652314 -107936974 - AluJb SINE Alu 0 331 1 1331 197 3 47 chr10 37652493 37652792 -107936496 + AluJo SINE Alu 3 288 -24 1145 188 14 9 chr10 37653171 37653384 -107935904 + AluJb SINE Alu 1 214 -98 783 139 8 25 chr10 37653586 37653708 -107935580 + FLAM_C SINE Alu 13 132 -11 548 120 0 0 chr10 37653713 37653788 -107935500 + AluJ/FRAM SINE Alu 220 294 -18 1490 214 11 40 chr10 37653789 37654140 -107935148 + L1MB4 LINE L1 5827 6167 -13 2350 100 10 0 chr10 37654435 37654744 -107934544 + AluSx SINE Alu 1 312 0 1982 206 62 31 chr10 37654762 37655276 -107934012 + L1MC4 LINE L1 6504 7033 -1009 594 175 19 29 chr10 37655278 37655381 -107933907 + FLAM_C SINE Alu 2 103 -40 2081 130 7 0 chr10 37655554 37655838 -107933450 + AluSq SINE Alu 1 286 -27 2062 135 0 7 chr10 37656397 37656701 -107932587 + AluSg SINE Alu 1 302 -8 2321 95 0 7 chr10 37656706 37657010 -107932278 + AluY SINE Alu 1 302 -9 1596 93 14 9 chr10 37657020 37657236 -107932052 + AluY SINE Alu 1 217 -94 198 0 0 0 chr10 37657256 37657278 -107932010 + (A)n Simple_repeat Simple_repeat 1 22 0 1023 127 30 18 chr10 37657418 37657583 -107931705 + L1PA16 LINE L1 6000 6166 0 741 110 30 0 chr10 37657596 37657696 -107931592 + AluSq SINE Alu 86 188 -125 389 141 127 0 chr10 37657696 37657767 -107931521 + AluSc SINE Alu 219 298 -1 800 147 0 0 chr10 37657775 37657884 -107931404 + FLAM_C SINE Alu 2 110 -33 1593 159 47 0 chr10 37657889 37658146 -107931142 - AluJb SINE Alu -43 269 1 487 81 0 54 chr10 37658171 37658245 -107931043 + AluSq/x SINE Alu 62 131 -182 222 37 0 0 chr10 37658279 37658306 -107930982 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1043 161 60 28 chr10 37658613 37658831 -107930457 - AluJo SINE Alu -1 311 87 226 317 192 17 chr10 37658914 37659034 -107930254 + L2 LINE L2 3173 3313 0 249 275 119 37 chr10 37659044 37659339 -107929949 + L2 LINE L2 2263 2581 -733 359 274 97 65 chr10 37659545 37659787 -107929501 + L2 LINE L2 2926 3221 -92 2256 94 24 0 chr10 37659787 37660085 -107929203 + AluSc SINE Alu 1 305 -4 359 274 97 65 chr10 37660085 37660174 -107929114 + L2 LINE L2 3221 3306 -7 2262 95 3 0 chr10 37660453 37660747 -107928541 + AluSq SINE Alu 1 295 -18 183 42 0 0 chr10 37661827 37661851 -107927437 + (CGG)n Simple_repeat Simple_repeat 2 25 0 23 54 0 0 chr10 37661900 37661937 -107927351 + GC_rich Low_complexity Low_complexity 1 37 0 2057 192 50 62 chr10 37663078 37663183 -107926105 + Charlie1a DNA MER1_type 2 107 -2654 2011 105 7 40 chr10 37663183 37663487 -107925801 - AluSx SINE Alu -18 294 1 1873 138 0 34 chr10 37663495 37663815 -107925473 - AluJo SINE Alu -3 309 1 2057 192 50 62 chr10 37663815 37664175 -107925113 + Charlie1a DNA MER1_type 114 472 -2289 2387 191 95 106 chr10 37664175 37664910 -107924378 + LTR8A LTR ERV1 1 727 0 2057 192 50 62 chr10 37664910 37664949 -107924339 + Charlie1a DNA MER1_type 472 510 -945 1753 161 24 7 chr10 37664951 37665249 -107924039 + AluSq SINE Alu 11 313 0 1197 172 201 9 chr10 37665255 37665598 -107923690 + Charlie1a DNA MER1_type 958 1366 -89 1033 139 0 0 chr10 37665601 37665752 -107923536 + MSTA LTR MaLR 278 428 0 463 128 88 78 chr10 37665752 37665798 -107923490 + Charlie1a DNA MER1_type 1359 1403 -1358 2431 74 3 0 chr10 37665798 37666094 -107923194 - AluSq SINE Alu -16 297 1 463 128 88 78 chr10 37666094 37666143 -107923145 + Charlie1a DNA MER1_type 1403 1455 0 2043 139 3 25 chr10 37666593 37666909 -107922379 + AluSx SINE Alu 1 309 -3 2076 118 0 7 chr10 37667131 37667420 -107921868 - AluSx SINE Alu -25 287 1 1863 150 23 3 chr10 37667526 37667826 -107921462 + AluSx SINE Alu 1 306 -6 1677 193 0 26 chr10 37667882 37668193 -107921095 + AluJb SINE Alu 1 303 -9 257 114 0 148 chr10 37668205 37668293 -107920995 + L1MC3 LINE L1 6837 6911 -874 2265 107 3 0 chr10 37668369 37668669 -107920619 - AluSq SINE Alu -12 301 1 1482 122 13 4 chr10 37668671 37668900 -107920388 + LTR59 LTR ERV1 320 550 -47 882 137 14 14 chr10 37668934 37669073 -107920215 + FRAM SINE Alu 30 168 -8 888 146 146 0 chr10 37669074 37669238 -107920050 + L1MC3 LINE L1 7212 7399 -386 1805 171 7 0 chr10 37669239 37669568 -107919720 + AluSx SINE Alu 2 332 0 595 167 0 11 chr10 37670000 37670090 -107919198 + AluJ/FLAM SINE Alu 3 91 -221 2065 125 3 10 chr10 37670208 37670505 -107918783 + AluSq SINE Alu 1 295 -18 2083 120 3 3 chr10 37670670 37670970 -107918318 + AluSc SINE Alu 1 300 -9 1345 136 120 44 chr10 37671077 37671327 -107917961 + AluSx SINE Alu 36 304 -8 963 145 0 0 chr10 37671534 37671665 -107917623 - FLAM_C SINE Alu -2 131 1 37 0 0 0 chr10 37671675 37671712 -107917576 + AT_rich Low_complexity Low_complexity 1 37 0 2359 93 20 0 chr10 37672039 37672340 -107916948 + AluSx SINE Alu 1 307 -5 240 226 32 32 chr10 37672379 37672473 -107916815 - L1MD2 LINE L1 -81 6085 6016 315 122 0 0 chr10 37673524 37673565 -107915723 - Alu SINE Alu -251 49 9 1746 111 21 0 chr10 37673566 37673846 -107915442 + AluSx SINE Alu 50 334 0 2067 156 0 0 chr10 37673849 37674156 -107915132 + AluSx SINE Alu 1 307 -5 2279 111 0 0 chr10 37674162 37674460 -107914828 + AluSg SINE Alu 1 298 -12 1841 151 3 30 chr10 37674705 37674872 -107914416 - AluJo SINE Alu -15 297 140 2722 32 3 0 chr10 37674872 37675182 -107914106 - AluY SINE Alu 0 311 1 1841 151 3 30 chr10 37675182 37675319 -107913969 - AluJo SINE Alu -172 140 1 238 280 119 25 chr10 37675468 37675586 -107913702 - MER69A DNA AcHobo -40 137 9 1556 178 4 0 chr10 37675724 37675983 -107913305 + AluJo SINE Alu 1 260 -52 2081 106 4 0 chr10 37676313 37676588 -107912700 - AluSp SINE Alu -37 276 1 285 264 0 23 chr10 37676610 37676697 -107912591 + L3 LINE CR1 767 851 -726 2454 53 0 3 chr10 37676703 37677005 -107912283 + AluY SINE Alu 1 301 -10 1851 74 122 11 chr10 37677016 37677287 -107912001 + AluY SINE Alu 1 301 -10 1632 165 72 44 chr10 37677580 37677863 -107911425 + MLT1A1 LTR MaLR 1 301 -64 2199 86 0 49 chr10 37677863 37678190 -107911098 - AluY SINE Alu 0 311 1 1632 165 72 44 chr10 37678190 37678257 -107911031 + MLT1A1 LTR MaLR 301 365 0 2212 92 3 10 chr10 37678510 37678832 -107910456 - AluY SINE Alu 0 311 1 2531 68 0 0 chr10 37679159 37679469 -107909819 + AluY SINE Alu 1 310 -1 362 332 5 87 chr10 37679606 37679734 -107909554 - L2 LINE L2 -604 2710 2602 1905 155 16 7 chr10 37679734 37680043 -107909245 + AluJb SINE Alu 1 312 0 362 332 5 87 chr10 37680043 37680110 -107909178 - L2 LINE L2 -712 2602 2531 1075 194 95 32 chr10 37680180 37680433 -107908855 - MLT1F LTR MaLR -64 478 210 1500 171 4 0 chr10 37680490 37680730 -107908558 + AluJb SINE Alu 2 242 -70 254 118 0 0 chr10 37680771 37680829 -107908459 + AluJb SINE Alu 250 307 0 813 324 119 18 chr10 37680887 37681426 -107907862 - L2 LINE L2 0 3313 2709 1657 169 52 3 chr10 37681450 37681740 -107907548 + AluJb SINE Alu 1 304 -8 1818 180 7 87 chr10 37681780 37681842 -107907446 - MLT1B LTR MaLR -7 383 318 1995 153 3 7 chr10 37681842 37682149 -107907139 + AluSx SINE Alu 3 308 -4 1818 180 7 87 chr10 37682149 37682502 -107906786 - MLT1B LTR MaLR -72 318 1 685 241 169 23 chr10 37682502 37682768 -107906520 - L2 LINE L2 -654 2660 2356 1714 173 7 23 chr10 37682815 37683116 -107906172 - AluJo SINE Alu -16 296 1 1852 119 0 8 chr10 37683164 37683424 -107905864 + AluSx SINE Alu 1 258 -54 319 358 129 52 chr10 37683521 37683714 -107905574 - HAL1 LINE L1 -2077 430 223 1965 293 39 15 chr10 37683785 37684451 -107904837 + L1MEc LINE L1 40 721 -5675 2071 118 30 0 chr10 37684470 37684766 -107904522 + AluSc SINE Alu 1 305 -4 2118 113 0 10 chr10 37684772 37685063 -107904225 + AluSx SINE Alu 1 288 -24 923 199 38 94 chr10 37685244 37685306 -107903982 + L1MEc LINE L1 860 924 -5291 1445 134 29 151 chr10 37685306 37685513 -107903775 - AluYb8 SINE Alu 0 308 160 2291 77 0 48 chr10 37685513 37685823 -107903465 - AluY SINE Alu -16 295 1 1445 134 29 151 chr10 37685823 37685965 -107903323 - AluYb8 SINE Alu -148 160 2 923 199 38 94 chr10 37685965 37685977 -107903311 + L1MEc LINE L1 924 935 -5280 2298 95 13 0 chr10 37685977 37686282 -107903006 - AluSq SINE Alu -4 309 1 923 199 38 94 chr10 37686282 37686532 -107902756 + L1MEc LINE L1 935 1197 -5018 2023 118 0 79 chr10 37686532 37686861 -107902427 + AluSx SINE Alu 1 303 -9 923 199 38 94 chr10 37686861 37686882 -107902406 + L1MEc LINE L1 1197 1218 -4997 2149 104 3 3 chr10 37686882 37687171 -107902117 + AluSg SINE Alu 1 289 -21 923 199 38 94 chr10 37687171 37687214 -107902074 + L1MEc LINE L1 1218 1262 -4953 1814 162 10 7 chr10 37687214 37687522 -107901766 + AluJb SINE Alu 1 309 -3 923 199 38 94 chr10 37687522 37687663 -107901625 + L1MEc LINE L1 1262 1409 -4806 2173 112 0 7 chr10 37687663 37687957 -107901331 + AluSx SINE Alu 1 292 -20 923 199 38 94 chr10 37687957 37688086 -107901202 + L1MEc LINE L1 1409 3543 -2672 2072 104 31 7 chr10 37688287 37688574 -107900714 + AluSc SINE Alu 1 294 -15 291 331 13 13 chr10 37688617 37688774 -107900514 + L1MCc LINE L1 49 205 -6218 1463 161 42 11 chr10 37688872 37689132 -107900156 - AluJo SINE Alu -44 268 1 464 258 93 11 chr10 37689132 37689314 -107899974 + L1MCc LINE L1 2553 2749 -4373 1820 161 40 6 chr10 37689477 37689800 -107899488 - L1MC1 LINE L1 0 6333 6000 393 231 160 6 chr10 37689847 37690003 -107899285 - L1MEd LINE L1 -4885 1234 1055 1229 184 90 30 chr10 37691163 37691479 -107897809 - AluJo SINE Alu 0 332 1 843 213 6 0 chr10 37691834 37691998 -107897290 + AluSg/x SINE Alu 135 299 -10 1778 150 7 17 chr10 37692228 37692522 -107896766 + AluJb SINE Alu 14 304 -8 1383 123 9 23 chr10 37692825 37693044 -107896244 - AluSg/x SINE Alu -11 299 84 279 292 123 32 chr10 37693044 37693198 -107896090 - MIR SINE MIR -32 230 63 1163 152 0 0 chr10 37693270 37693435 -107895853 + AluJb SINE Alu 141 305 -7 307 377 91 7 chr10 37693910 37694064 -107895224 + MIR3 SINE MIR 9 175 -33 403 150 57 121 chr10 37694106 37694225 -107895063 - MIR SINE MIR 0 262 151 1839 163 0 14 chr10 37694225 37694544 -107894744 - AluSx SINE Alu 0 315 1 403 150 57 121 chr10 37694544 37694563 -107894725 - MIR SINE MIR -111 151 132 1136 147 0 12 chr10 37694564 37694734 -107894554 + AluJb SINE Alu 109 276 -36 207 0 0 0 chr10 37694761 37694784 -107894504 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 22 0 0 0 chr10 37694860 37694882 -107894406 + AT_rich Low_complexity Low_complexity 1 22 0 248 200 40 20 chr10 37695137 37695187 -107894101 + L2 LINE L2 3207 3257 -15 222 320 88 46 chr10 37695313 37695597 -107893691 - L2 LINE L2 -932 2382 2087 748 209 7 29 chr10 37695645 37695784 -107893504 + FRAM SINE Alu 11 146 -30 704 159 79 24 chr10 37695905 37696031 -107893257 + AluJo SINE Alu 4 136 -176 208 240 198 33 chr10 37696641 37696762 -107892526 - MIR SINE MIR -74 188 48 943 195 54 34 chr10 37697185 37697390 -107891898 - MER6B DNA MER2_type -1 209 1 2022 103 50 0 chr10 37697436 37697717 -107891571 - AluSx SINE Alu -17 295 1 698 146 55 0 chr10 37697743 37697853 -107891435 - FLAM_C SINE Alu -16 117 2 295 250 0 15 chr10 37697968 37698036 -107891252 + MLT1D LTR MaLR 254 320 -185 721 128 24 16 chr10 37698037 37698162 -107891126 + AluJb SINE Alu 152 277 -35 245 349 0 8 chr10 37698307 37698436 -107890852 + C-rich Low_complexity Low_complexity 4 131 0 206 297 18 27 chr10 37698850 37698961 -107890327 + G-rich Low_complexity Low_complexity 3 112 0 2236 74 28 0 chr10 37699456 37699739 -107889549 - AluSg SINE Alu -19 291 1 2566 51 0 6 chr10 37700114 37700426 -107888862 - AluY SINE Alu -1 310 1 2313 102 3 0 chr10 37701516 37701821 -107887467 + AluSp SINE Alu 1 306 -7 1444 189 40 18 chr10 37702107 37702481 -107886807 + Tigger3(Golem) DNA MER2_type 7 3027 -2 2118 88 48 10 chr10 37703535 37703830 -107885458 + AluSg SINE Alu 1 306 -4 2023 128 31 0 chr10 37704911 37705201 -107884087 - AluSx SINE Alu -13 299 1 1083 139 47 0 chr10 37705651 37705823 -107883465 - AluSg/x SINE Alu -7 305 126 2172 108 0 3 chr10 37705824 37706119 -107883169 - AluSx SINE Alu -18 294 1 249 164 98 0 chr10 37706229 37706290 -107882998 - L1MC4 LINE L1 -291 7751 7685 2302 108 0 0 chr10 37706358 37706665 -107882623 + AluSx SINE Alu 1 307 -5 387 103 52 0 chr10 37707045 37707103 -107882185 + U7 snRNA snRNA 1 61 -2 775 189 39 0 chr10 37707211 37707338 -107881950 + FLAM_C SINE Alu 2 133 0 229 313 87 48 chr10 37707346 37707576 -107881712 - L2 LINE L2 -1209 2105 1867 180 0 0 0 chr10 37708392 37708412 -107880876 + (T)n Simple_repeat Simple_repeat 1 20 0 1451 209 26 0 chr10 37708447 37708715 -107880573 - AluJb SINE Alu -37 275 1 22 56 0 0 chr10 37708766 37708802 -107880486 + AT_rich Low_complexity Low_complexity 1 36 0 25 0 0 0 chr10 37709299 37709324 -107879964 + AT_rich Low_complexity Low_complexity 1 25 0 180 200 0 0 chr10 37709551 37709591 -107879697 + (TA)n Simple_repeat Simple_repeat 2 41 0 1213 118 28 0 chr10 37710126 37710304 -107878984 - AluSg/x SINE Alu -10 300 118 23 54 0 0 chr10 37710304 37710341 -107878947 + AT_rich Low_complexity Low_complexity 1 37 0 615 168 11 0 chr10 37710342 37710437 -107878851 + AluJ/FLAM SINE Alu 2 97 -215 331 128 0 0 chr10 37710458 37710505 -107878783 + FLAM_A SINE Alu 81 127 -6 30 45 0 0 chr10 37710524 37710568 -107878720 + AT_rich Low_complexity Low_complexity 1 44 0 2041 134 14 0 chr10 37710728 37711020 -107878268 - AluSx SINE Alu -16 296 1 219 292 46 0 chr10 37711507 37711572 -107877716 + MIR SINE MIR 189 256 -6 182 261 102 57 chr10 37711766 37711854 -107877434 - L2 LINE L2 -14 3258 3167 21 0 0 0 chr10 37712066 37712087 -107877201 + AT_rich Low_complexity Low_complexity 1 21 0 478 356 58 53 chr10 37712132 37712531 -107876757 - L2 LINE L2 -36 3236 2836 384 269 60 22 chr10 37712574 37712708 -107876580 + MIR SINE MIR 2 140 -122 303 85 43 0 chr10 37712718 37712765 -107876523 - AluSg SINE Alu -4 298 250 205 225 0 0 chr10 37712812 37712852 -107876436 + MIR SINE MIR 219 258 -4 1564 308 155 43 chr10 37712865 37714218 -107875070 - L2 LINE L2 -529 2785 1585 1831 162 0 7 chr10 37714218 37714508 -107874780 - AluJb SINE Alu -24 288 1 1564 308 155 43 chr10 37714508 37714624 -107874664 - L2 LINE L2 -1729 1585 1483 1919 102 0 0 chr10 37714624 37714869 -107874419 - AluSg SINE Alu -65 245 1 1564 308 155 43 chr10 37714869 37715477 -107873811 - L2 LINE L2 -1831 1483 389 224 273 102 31 chr10 37716054 37716182 -107873106 - L2 LINE L2 -1047 2267 2131 2270 97 7 0 chr10 37716479 37716779 -107872509 + AluSx SINE Alu 1 302 -10 2040 118 16 7 chr10 37717096 37717402 -107871886 + AluSx SINE Alu 1 309 -3 418 301 98 35 chr10 37717448 37717621 -107871667 - MER5A DNA MER1_type -2 187 4 181 247 214 34 chr10 37717642 37717731 -107871557 + L2 LINE L2 3204 3308 -5 317 320 0 47 chr10 37717907 37718057 -107871231 - MER103 DNA DNA -1 165 23 2594 48 0 10 chr10 37718640 37718951 -107870337 - AluY SINE Alu -3 308 1 22 94 0 0 chr10 37718959 37719023 -107870265 + AT_rich Low_complexity Low_complexity 1 64 0 2224 119 71 0 chr10 37719571 37719908 -107869380 - MER46B DNA MER2_type 0 236 1 462 313 125 57 chr10 37720591 37720974 -107868314 - L2 LINE L2 0 3272 2864 450 0 0 0 chr10 37721488 37721538 -107867750 + (CA)n Simple_repeat Simple_repeat 2 51 0 568 158 115 22 chr10 37721544 37721683 -107867605 - L1ME4a LINE L1 -15 6106 5955 810 178 0 22 chr10 37721793 37721928 -107867360 - FLAM_C SINE Alu -1 132 1 1950 147 3 0 chr10 37722138 37722430 -107866858 + AluSx SINE Alu 1 293 -19 1814 152 6 51 chr10 37722934 37723272 -107866016 - AluSx SINE Alu 0 312 1 285 204 104 104 chr10 37724475 37724551 -107864737 - L1MC5 LINE L1 -48 7913 7838 1533 140 41 92 chr10 37724551 37724865 -107864423 + AluJo SINE Alu 1 298 -14 285 204 104 104 chr10 37724865 37725038 -107864250 - L1MC5 LINE L1 -122 7839 7664 940 114 108 6 chr10 37726944 37727110 -107862178 + L1MB2 LINE L1 5985 6167 -4 267 31 0 0 chr10 37727202 37727234 -107862054 + (TTTTC)n Simple_repeat Simple_repeat 2 33 0 2031 101 4 14 chr10 37727244 37727521 -107861767 - AluSc SINE Alu -35 274 1 2367 101 0 0 chr10 37727523 37727831 -107861457 - AluY SINE Alu -3 308 1 1792 189 0 10 chr10 37727836 37728142 -107861146 - AluJo SINE Alu -9 303 1 5469 157 26 48 chr10 37728513 37728941 -107860347 + L1 LINE L1 3668 4104 -2042 1943 136 0 16 chr10 37728941 37729249 -107860039 + AluJb SINE Alu 1 303 -9 5469 157 26 48 chr10 37729249 37729893 -107859395 + L1 LINE L1 4104 4717 -1429 219 103 0 0 chr10 37730391 37730430 -107858858 + (T)n Simple_repeat Simple_repeat 1 39 0 3586 153 33 15 chr10 37730873 37731541 -107857747 + L1 LINE L1 4696 5375 -771 379 212 0 0 chr10 37731544 37731610 -107857678 - Tigger3b DNA MER2_type 0 1232 1167 2301 128 37 3 chr10 37731646 37731999 -107857289 - Tigger3b DNA MER2_type -51 1180 816 1147 146 12 6 chr10 37732002 37732173 -107857115 - AluJo SINE Alu -21 291 120 2937 120 136 7 chr10 37732175 37732735 -107856553 - Tigger3b DNA MER2_type -404 827 196 1097 142 12 0 chr10 37732742 37732911 -107856377 - AluSg/x SINE Alu -25 285 115 847 126 16 60 chr10 37732918 37733100 -107856188 + AluSg/x SINE Alu 113 286 -26 17479 42 5 5 chr10 37733275 37735000 -107854288 - L1P2 LINE L1 -641 5514 3786 2260 94 0 10 chr10 37735000 37735299 -107853989 - AluY SINE Alu -15 296 1 17479 42 5 5 chr10 37735299 37735840 -107853448 - L1P2 LINE L1 -2369 3786 3247 2186 119 0 0 chr10 37736196 37736491 -107852797 - AluSx SINE Alu -2 310 16 6064 190 74 30 chr10 37737354 37738653 -107850635 + Charlie1a DNA MER1_type 2 1367 -1394 799 261 77 0 chr10 37738653 37738848 -107850440 - MER63A DNA MER1_type 0 210 1 6064 190 74 30 chr10 37738848 37738935 -107850353 + Charlie1a DNA MER1_type 1367 1449 -6 2318 89 3 0 chr10 37740199 37740492 -107848796 + AluY SINE Alu 1 294 -17 2533 67 0 6 chr10 37741430 37741742 -107847546 - AluY SINE Alu -1 310 1 724 202 0 16 chr10 37742503 37742632 -107846656 - AluJb SINE Alu -185 127 1 303 240 41 50 chr10 37742738 37742859 -107846429 + MIR SINE MIR 72 191 -71 206 259 86 43 chr10 37743737 37743876 -107845412 + L2 LINE L2 3127 3271 -1 218 271 62 54 chr10 37746224 37746353 -107842935 + MIR SINE MIR 68 197 -65 1803 161 10 16 chr10 37746616 37746920 -107842368 + AluJo SINE Alu 1 302 -10 23 0 0 0 chr10 37747431 37747454 -107841834 + AT_rich Low_complexity Low_complexity 1 23 0 2128 109 3 0 chr10 37748816 37749125 -107840163 + AluSq SINE Alu 1 310 0 692 155 0 127 chr10 37749140 37749282 -107840006 + FLAM_A SINE Alu 1 124 -9 297 0 0 0 chr10 37750057 37750090 -107839198 + (TTCA)n Simple_repeat Simple_repeat 2 34 0 2301 83 10 3 chr10 37750127 37750427 -107838861 - AluSp SINE Alu -11 302 1 229 143 0 0 chr10 37750775 37750810 -107838478 - MER20 DNA MER1_type 0 219 185 256 125 45 11 chr10 37751625 37751713 -107837575 + (TA)n Simple_repeat Simple_repeat 1 91 0 304 186 48 0 chr10 37751738 37751905 -107837383 + (TA)n Simple_repeat Simple_repeat 2 176 0 53 30 0 0 chr10 37751905 37751972 -107837316 + AT_rich Low_complexity Low_complexity 1 67 0 483 29 80 51 chr10 37751972 37752147 -107837141 + (TA)n Simple_repeat Simple_repeat 1 180 0 22 0 0 0 chr10 37752147 37752169 -107837119 + AT_rich Low_complexity Low_complexity 1 22 0 255 206 137 10 chr10 37752285 37752387 -107836901 + AluSp SINE Alu 121 235 -68 1136 143 14 32 chr10 37752404 37752620 -107836668 + AluSg/x SINE Alu 85 296 -16 4992 143 33 15 chr10 37752620 37753498 -107835790 + L1MA8 LINE L1 5393 6286 -5 1918 134 16 23 chr10 37753879 37754185 -107835103 + AluJb SINE Alu 6 309 -3 1506 163 95 25 chr10 37754347 37754483 -107834805 + AluJo SINE Alu 1 126 -186 2312 96 6 10 chr10 37754483 37754795 -107834493 + AluSq SINE Alu 1 311 -2 1506 163 95 25 chr10 37754795 37754941 -107834347 + AluJo SINE Alu 126 303 -9 245 304 13 0 chr10 37755139 37755218 -107834070 + MIR SINE MIR 182 261 -1 2224 125 103 45 chr10 37755680 37755714 -107833574 - MSTB LTR MaLR -4 422 391 2063 114 6 25 chr10 37755714 37756029 -107833259 + AluSx SINE Alu 1 309 -3 2224 125 103 45 chr10 37756029 37756393 -107832895 - MSTB LTR MaLR -35 391 1 25 0 0 0 chr10 37756650 37756675 -107832613 + AT_rich Low_complexity Low_complexity 1 25 0 2008 127 7 13 chr10 37757226 37757525 -107831763 + AluSx SINE Alu 1 297 -15 922 163 6 18 chr10 37757525 37757691 -107831597 + AluSq SINE Alu 134 297 -16 2148 113 3 0 chr10 37757805 37758087 -107831201 + AluSx SINE Alu 1 283 -29 1524 17 0 6 chr10 37758844 37758865 -107830423 - L1PA3 LINE L1 -251 5904 5884 15827 49 11 5 chr10 37758865 37760911 -107828377 - L1MB1 LINE L1 -306 5883 3777 2260 94 0 10 chr10 37760911 37761210 -107828078 - AluY SINE Alu -15 296 1 15827 49 11 5 chr10 37761210 37761555 -107827733 - L1MB1 LINE L1 -2412 3777 3436 2879 100 2 9 chr10 37761667 37762088 -107827200 - L1P4 LINE L1 -372 5791 5374 536 250 40 0 chr10 37762096 37762244 -107827044 + L2 LINE L2 1228 1381 -1933 2129 122 0 10 chr10 37762245 37762541 -107826747 - AluSx SINE Alu -18 294 2 2064 298 109 31 chr10 37762655 37763063 -107826225 - HERV16 LTR ERVL -1905 3091 2716 2513 108 13 35 chr10 37763063 37763435 -107825853 - THE1B LTR MaLR 0 364 1 2064 298 109 31 chr10 37763435 37764094 -107825194 - HERV16 LTR ERVL -2280 2716 2240 2297 113 0 7 chr10 37764094 37764403 -107824885 - AluSx SINE Alu -5 307 1 2064 298 109 31 chr10 37764403 37764519 -107824769 - HERV16 LTR ERVL -2756 2240 2134 2324 46 42 3 chr10 37764519 37764804 -107824484 + AluY SINE Alu 1 296 -15 625 270 134 54 chr10 37764811 37765206 -107824082 + L1MC/D LINE L1 5284 5744 -426 1683 131 24 40 chr10 37765206 37765503 -107823785 + AluSq SINE Alu 21 312 -1 625 270 134 54 chr10 37765503 37765606 -107823682 + L1MC/D LINE L1 5744 5837 -333 1942 143 7 0 chr10 37765716 37766009 -107823279 + AluJo SINE Alu 1 295 -17 440 244 79 107 chr10 37766014 37766305 -107822983 + MLT1J LTR MaLR 229 511 0 881 161 0 7 chr10 37766493 37766630 -107822658 - AluJo SINE Alu -176 136 1 191 22 67 44 chr10 37766831 37766876 -107822412 + A-rich Low_complexity Low_complexity 2 47 0 374 295 37 83 chr10 37767277 37767561 -107821727 + L1M4 LINE L1 3649 3917 -2229 2195 94 3 7 chr10 37767762 37768076 -107821212 - AluSx SINE Alu 0 313 1 492 109 0 0 chr10 37768096 37768160 -107821128 - U6 snRNA snRNA -43 64 1 1753 156 10 49 chr10 37768648 37768789 -107820499 + AluJo SINE Alu 1 146 -166 2086 95 35 0 chr10 37768789 37769072 -107820216 + AluSp SINE Alu 1 293 -20 1753 156 10 49 chr10 37769072 37769238 -107820050 + AluJo SINE Alu 146 296 -16 222 268 146 12 chr10 37769571 37769653 -107819635 + MER5A DNA MER1_type 74 166 -23 2436 138 62 7 chr10 37769657 37770063 -107819225 + MSTC LTR MaLR 1 428 0 2331 89 0 7 chr10 37770176 37770480 -107818808 + AluSx SINE Alu 1 302 -10 768 226 12 24 chr10 37770491 37770655 -107818633 + FRAM SINE Alu 1 162 -14 2272 60 0 3 chr10 37770655 37770975 -107818313 + AluY SINE Alu 1 319 0 7391 163 31 75 chr10 37770977 37771577 -107817711 - LTR49-int LTR ERV1 -1915 4416 3791 1951 151 0 0 chr10 37771577 37771869 -107817419 - AluSx SINE Alu -10 302 11 7391 163 31 75 chr10 37771869 37772501 -107816787 - LTR49-int LTR ERV1 -2540 3791 3133 1521 199 0 7 chr10 37772501 37772783 -107816505 + AluJb SINE Alu 29 308 -4 7391 163 31 75 chr10 37772783 37773068 -107816220 - LTR49-int LTR ERV1 -3198 3133 2978 2484 77 3 0 chr10 37773068 37773379 -107815909 + AluSp SINE Alu 1 312 -1 7391 163 31 75 chr10 37773379 37773549 -107815739 - LTR49-int LTR ERV1 -3353 2978 2802 381 181 69 0 chr10 37773567 37773639 -107815649 - LTR49-int LTR ERV1 -4739 1592 1516 367 274 0 0 chr10 37773643 37773716 -107815572 - tRNA-Glu-GAG tRNA tRNA 0 75 3 1980 152 17 51 chr10 37773716 37774008 -107815280 - LTR49-int LTR ERV1 -3271 1609 1309 2149 107 3 10 chr10 37774008 37774308 -107814980 + AluSx SINE Alu 1 298 -14 1980 152 17 51 chr10 37774308 37774702 -107814586 - LTR49-int LTR ERV1 -3571 1309 575 1197 140 0 0 chr10 37774703 37774881 -107814407 + AluSg/x SINE Alu 131 308 -2 1831 168 54 21 chr10 37774882 37775270 -107814018 - LTR49-int LTR ERV1 -4629 1317 15 3325 138 49 37 chr10 37775286 37775444 -107813844 - LTR49 LTR ERV1 0 595 440 2154 102 17 3 chr10 37775444 37775738 -107813550 - AluSx SINE Alu -12 300 3 3325 138 49 37 chr10 37775738 37775749 -107813539 - LTR49 LTR ERV1 -155 440 431 2494 58 0 10 chr10 37775749 37776043 -107813245 - AluY SINE Alu -20 291 1 3325 138 49 37 chr10 37776043 37776460 -107812828 - LTR49 LTR ERV1 -164 431 1 456 188 21 0 chr10 37776706 37776802 -107812486 - MER53 DNA DNA -90 99 2 22 35 0 0 chr10 37776806 37776835 -107812453 + AT_rich Low_complexity Low_complexity 1 29 0 1447 82 10 5 chr10 37777031 37777227 -107812061 - AluSg/x SINE Alu -4 306 110 2233 77 0 21 chr10 37777249 37777555 -107811733 + AluSc SINE Alu 1 300 0 2255 112 3 10 chr10 37777617 37777931 -107811357 + AluSx SINE Alu 1 312 0 1505 147 98 11 chr10 37777944 37778210 -107811078 + AluJo SINE Alu 1 289 -23 411 149 27 0 chr10 37778357 37778431 -107810857 - AluSx SINE Alu -1 310 235 1510 97 0 5 chr10 37778431 37778626 -107810662 - AluSx SINE Alu -118 194 1 873 197 93 73 chr10 37778801 37778956 -107810332 - AluJo SINE Alu -7 295 130 1636 186 0 47 chr10 37778956 37779278 -107810010 - AluJo SINE Alu -5 307 1 873 197 93 73 chr10 37779278 37779411 -107809877 - AluJo SINE Alu -172 130 1 2021 122 36 10 chr10 37779720 37779844 -107809444 + AluSx SINE Alu 1 120 -192 2439 71 0 7 chr10 37779844 37780141 -107809147 + AluY SINE Alu 1 295 -16 2021 122 36 10 chr10 37780141 37780319 -107808969 + AluSx SINE Alu 120 311 -1 972 189 0 0 chr10 37780358 37780522 -107808766 - FRAM SINE Alu -12 164 1 423 292 33 0 chr10 37780713 37780833 -107808455 + L2 LINE L2 3190 3313 0 2792 174 56 33 chr10 37780862 37780927 -107808361 - L1MB2 LINE L1 -4 6167 6105 1903 171 13 0 chr10 37780927 37781231 -107808057 - AluSx SINE Alu -4 308 1 2792 174 56 33 chr10 37781231 37781804 -107807484 - L1MB2 LINE L1 -66 6105 5514 2220 101 0 16 chr10 37782152 37782459 -107806829 + AluSg SINE Alu 1 302 -8 2271 141 95 0 chr10 37782600 37782990 -107806298 - MSTA LTR MaLR -1 427 1 2362 112 0 0 chr10 37783099 37783411 -107805877 + AluSx SINE Alu 1 312 0 1956 144 30 3 chr10 37784081 37784380 -107804908 + AluJo SINE Alu 1 307 -5 2522 61 0 0 chr10 37784380 37784729 -107804559 + AluY SINE Alu 17 365 0 2250 110 0 16 chr10 37785131 37785449 -107803839 + AluSq SINE Alu 1 313 0 818 208 0 0 chr10 37785472 37785626 -107803662 + AluJb SINE Alu 147 300 -12 1439 180 51 31 chr10 37785717 37786011 -107803277 - AluSx SINE Alu -2 300 1 2048 128 0 42 chr10 37786541 37786682 -107802606 + AluSx SINE Alu 5 150 -162 2517 73 0 0 chr10 37786682 37786985 -107802303 + AluY SINE Alu 1 303 -8 2048 128 0 42 chr10 37786985 37787155 -107802133 + AluSx SINE Alu 150 303 -9 517 319 28 22 chr10 37787203 37787385 -107801903 + MER5A DNA MER1_type 7 189 0 570 78 13 0 chr10 37787729 37787806 -107801482 - U6 snRNA snRNA -1 106 29 679 211 0 0 chr10 37787885 37788008 -107801280 + FLAM_C SINE Alu 2 124 -19 1881 181 0 0 chr10 37788359 37788658 -107800630 - AluJb SINE Alu -13 299 1 458 157 22 11 chr10 37788732 37788821 -107800467 - Cheshire DNA MER1_type -16 2404 2315 * 7276 181 41 31 chr10 37788820 37789053 -107800235 - Cheshire DNA MER1_type -343 2077 1848 2589 55 0 3 chr10 37789053 37789362 -107799926 + AluY SINE Alu 1 308 -3 7276 181 41 31 chr10 37789362 37790029 -107799259 - Cheshire DNA MER1_type -572 1848 1189 1430 175 3 92 chr10 37790029 37790344 -107798944 - AluJo SINE Alu -22 290 4 7276 181 41 31 chr10 37790344 37790644 -107798644 - Cheshire DNA MER1_type -1231 1189 894 2520 60 0 7 chr10 37790644 37790946 -107798342 - AluY SINE Alu -11 300 1 7276 181 41 31 chr10 37790946 37791318 -107797970 - Cheshire DNA MER1_type -1526 894 487 1942 148 19 13 chr10 37791320 37791630 -107797658 + AluJb SINE Alu 1 312 0 7148 155 33 90 chr10 37791640 37792087 -107797201 - L1M4 LINE L1 -3267 3115 2644 1831 127 91 7 chr10 37792087 37792363 -107796925 - AluSx SINE Alu -9 303 5 7148 155 33 90 chr10 37792363 37792378 -107796910 - L1M4 LINE L1 -3738 2644 2630 1851 171 0 0 chr10 37792378 37792664 -107796624 - AluJb SINE Alu -26 286 1 7148 155 33 90 chr10 37792664 37793223 -107796065 - L1M4 LINE L1 -3752 2630 2041 2320 94 7 7 chr10 37793223 37793532 -107795756 + AluSg1 SINE Alu 1 309 0 7148 155 33 90 chr10 37793532 37794079 -107795209 - L1M4 LINE L1 -4341 2041 1711 746 220 0 0 chr10 37794079 37794211 -107795077 - FLAM_A SINE Alu -1 132 1 7148 155 33 90 chr10 37794211 37794855 -107794433 - L1M4 LINE L1 -4671 1711 1032 660 109 0 0 chr10 37794855 37794947 -107794341 + AluSg/x SINE Alu 206 297 -13 3580 177 50 33 chr10 37794951 37795432 -107793856 - L1M4 LINE L1 -5620 764 264 2115 96 20 3 chr10 37795432 37795724 -107793564 + AluSg SINE Alu 5 301 -9 3580 177 50 33 chr10 37795724 37795975 -107793313 - L1M4 LINE L1 -6120 264 19 1104 192 123 0 chr10 37796055 37796258 -107793030 - AluJo SINE Alu -84 228 1 2244 108 0 29 chr10 37796265 37796581 -107792707 - AluSx SINE Alu -5 307 1 215 386 0 11 chr10 37797312 37797400 -107791888 + MER5B DNA MER1_type 6 92 -86 1331 221 42 0 chr10 37797619 37797907 -107791381 + AluJb SINE Alu 12 310 0 1408 169 0 66 chr10 37797914 37798009 -107791279 + AluJo SINE Alu 37 137 -175 2169 114 13 7 chr10 37798009 37798307 -107790981 - AluSx SINE Alu -12 300 1 1408 169 0 66 chr10 37798307 37798483 -107790805 + AluJo SINE Alu 137 290 -22 2216 128 0 0 chr10 37798509 37798815 -107790473 + AluSq SINE Alu 1 306 -7 1572 136 21 0 chr10 37798817 37799053 -107790235 + AluSg/x SINE Alu 65 305 -5 1871 158 0 11 chr10 37799093 37799437 -107789851 - AluSx SINE Alu 0 341 1 226 281 16 0 chr10 37799697 37799712 -107789576 + GA-rich Low_complexity Low_complexity 3 16 -51 1869 135 0 50 chr10 37799712 37799851 -107789437 + AluJo SINE Alu 1 145 -167 2555 68 0 3 chr10 37799851 37800161 -107789127 + AluY SINE Alu 1 309 -2 1869 135 0 50 chr10 37800161 37800347 -107788941 + AluJo SINE Alu 145 312 0 226 281 16 0 chr10 37800347 37800395 -107788893 + GA-rich Low_complexity Low_complexity 16 67 0 4043 84 25 4 chr10 37800454 37801012 -107788276 - L1PA11 LINE L1 -4 6170 5601 956 18 0 0 chr10 37801013 37801124 -107788164 - L1PA4 LINE L1 0 6155 6045 2397 82 27 62 chr10 37801124 37801424 -107787864 - L1PA11 LINE L1 -551 5623 5335 1740 117 101 0 chr10 37801424 37801705 -107787583 - AluSx SINE Alu 0 307 1 2397 82 27 62 chr10 37801705 37801883 -107787405 - L1PA11 LINE L1 -839 5335 5152 2213 103 0 67 chr10 37802845 37803176 -107786112 - AluSx SINE Alu -3 309 1 2032 105 72 4 chr10 37803599 37803876 -107785412 + AluSx SINE Alu 4 299 -13 22 0 0 0 chr10 37804328 37804350 -107784938 + AT_rich Low_complexity Low_complexity 1 22 0 297 240 8 83 chr10 37805124 37805245 -107784043 + MIR SINE MIR 20 131 -77 23 0 0 0 chr10 37806042 37806065 -107783223 + AT_rich Low_complexity Low_complexity 1 23 0 1984 152 0 3 chr10 37806135 37806431 -107782857 + AluSx SINE Alu 1 295 -17 782 117 0 8 chr10 37806570 37806690 -107782598 - L1PB3 LINE L1 -1 6153 6035 575 196 0 15 chr10 37806951 37807084 -107782204 - L1MB8 LINE L1 -8 6170 6040 23 0 0 0 chr10 37807127 37807150 -107782138 + AT_rich Low_complexity Low_complexity 1 23 0 1729 174 43 0 chr10 37807151 37807432 -107781856 - AluJo SINE Alu -19 293 1 764 203 44 6 chr10 37807432 37807590 -107781698 + MLT1E LTR MaLR 429 592 -1 496 327 6 0 chr10 37807591 37807756 -107781532 + ERVL LTR ERVL 4214 4379 -1385 1165 147 0 0 chr10 37808489 37808659 -107780629 + FRAM SINE Alu 1 170 -6 306 219 27 14 chr10 37808792 37808865 -107780423 + LTR16A LTR ERVL 56 129 -321 316 289 139 12 chr10 37808920 37809086 -107780202 + LTR16A LTR ERVL 246 432 -18 861 265 183 41 chr10 37809302 37809660 -107779628 + L1M4 LINE L1 3589 3895 -2251 2175 111 46 32 chr10 37809660 37810030 -107779258 + THE1C LTR MaLR 1 375 0 861 265 183 41 chr10 37810030 37810621 -107778667 + L1M4 LINE L1 3895 4673 -1473 1476 184 44 23 chr10 37810621 37811066 -107778222 + MLT1D LTR MaLR 1 505 0 2105 141 10 0 chr10 37811350 37811655 -107777633 + AluSx SINE Alu 1 308 -4 248 275 88 21 chr10 37811670 37811910 -107777378 + L1M4 LINE L1 5024 5279 -867 2133 118 3 20 chr10 37811914 37812218 -107777070 - AluSx SINE Alu -13 299 1 538 115 48 0 chr10 37812684 37812849 -107776439 + (TA)n Simple_repeat Simple_repeat 2 174 0 2087 118 21 0 chr10 37812873 37813160 -107776128 - AluSq SINE Alu -20 293 1 222 37 0 0 chr10 37813261 37813288 -107776000 + (TTTTC)n Simple_repeat Simple_repeat 4 30 0 882 120 0 0 chr10 37813288 37813405 -107775883 - AluJb SINE Alu -195 117 1 2236 83 6 51 chr10 37814260 37814574 -107774714 - AluSx SINE Alu -12 300 1 2096 110 3 3 chr10 37815105 37815396 -107773892 - AluSx SINE Alu -1 311 21 336 282 50 28 chr10 37815789 37815970 -107773318 - L1M4 LINE L1 -1029 5117 4933 198 103 0 0 chr10 37816218 37816247 -107773041 + (TAA)n Simple_repeat Simple_repeat 2 30 0 2289 86 10 3 chr10 37816270 37816562 -107772726 - AluY SINE Alu -17 294 1 198 0 0 0 chr10 37816687 37816709 -107772579 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 449 255 99 70 chr10 37816755 37817127 -107772161 - L1M4 LINE L1 -1701 4445 4063 1950 158 0 0 chr10 37817935 37818247 -107771041 - AluSx SINE Alu 0 314 3 898 181 0 12 chr10 37818249 37818409 -107770879 - MLT1A1 LTR MaLR -207 158 1 212 362 0 0 chr10 37818774 37818832 -107770456 + L2 LINE L2 3210 3267 -5 2420 82 10 3 chr10 37819422 37819725 -107769563 + AluSx SINE Alu 5 309 -3 446 179 13 0 chr10 37820017 37820095 -107769193 - MER116 DNA Mariner 0 80 2 243 0 0 0 chr10 37820502 37820529 -107768759 + (TTA)n Simple_repeat Simple_repeat 2 28 0 202 222 0 28 chr10 37821041 37821113 -107768175 + CT-rich Low_complexity Low_complexity 4 73 0 2075 41 49 0 chr10 37822466 37822712 -107766576 - AluY SINE Alu -8 303 46 459 0 0 0 chr10 37823017 37823068 -107766220 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 2397 35 3 21 chr10 37823070 37823357 -107765931 - AluY SINE Alu -29 282 1 467 264 108 22 chr10 37823504 37823735 -107765553 + MER112 DNA MER1_type 2 252 -4 2433 78 0 0 chr10 37823843 37824138 -107765150 + AluSg SINE Alu 1 295 -15 2351 94 3 0 chr10 37824468 37824767 -107764521 + AluSx SINE Alu 1 300 -12 22 56 0 0 chr10 37824999 37825035 -107764253 + AT_rich Low_complexity Low_complexity 1 36 0 195 250 83 0 chr10 37825263 37825323 -107763965 - MIR SINE MIR -147 115 51 2413 90 7 0 chr10 37825488 37825789 -107763499 - AluSq SINE Alu -10 303 1 540 162 86 0 chr10 37825946 37826063 -107763225 + L1MA9 LINE L1 6184 6310 -2 636 223 223 9 chr10 37826937 37827148 -107762140 - MIR SINE MIR -6 256 1 216 263 53 53 chr10 37827540 37827635 -107761653 - L2 LINE L2 -5 3267 3173 820 169 0 0 chr10 37828024 37828154 -107761134 - FLAM_C SINE Alu -2 131 2 428 282 201 10 chr10 37828411 37828620 -107760668 - MARNA DNA Mariner -52 534 286 1878 172 30 0 chr10 37828642 37828945 -107760343 - AluJb SINE Alu 0 312 1 2149 129 0 0 chr10 37829011 37829314 -107759974 + AluSg SINE Alu 1 303 -7 186 71 0 0 chr10 37829315 37829343 -107759945 + (T)n Simple_repeat Simple_repeat 1 28 0 2195 117 7 0 chr10 37829919 37830217 -107759071 + AluSc SINE Alu 1 300 -9 1000 237 117 30 chr10 37831218 37831276 -107758012 - MER63B DNA MER1_type -626 436 384 2094 124 3 3 chr10 37831276 37831566 -107757722 + AluSx SINE Alu 1 290 -22 2630 41 0 0 chr10 37831566 37831860 -107757428 + AluY SINE Alu 1 294 -17 1000 237 117 30 chr10 37831567 37832202 -107757086 - MER63B DNA MER1_type -678 384 1 2371 71 0 7 chr10 37832712 37833008 -107756280 + AluY SINE Alu 3 296 -15 242 104 0 21 chr10 37833035 37833083 -107756205 + (TAAAAA)n Simple_repeat Simple_repeat 3 49 0 2214 103 7 3 chr10 37833093 37833383 -107755905 + AluSc SINE Alu 1 291 -18 33 56 0 0 chr10 37833973 37834027 -107755261 + AT_rich Low_complexity Low_complexity 1 54 0 375 293 98 56 chr10 37834177 37834443 -107754845 - MLT1J LTR MaLR -140 371 95 511 265 70 28 chr10 37834508 37834723 -107754565 - MIR SINE MIR -24 238 15 2272 131 0 0 chr10 37838863 37839168 -107750120 - AluSx SINE Alu -7 305 1 438 230 52 37 chr10 37839758 37839893 -107749395 - MLT1L LTR MaLR -50 565 429 728 105 0 0 chr10 37839978 37840083 -107749205 - AluY SINE Alu -2 309 205 2012 101 4 0 chr10 37841213 37841471 -107747817 - AluSx SINE Alu -53 259 1 972 176 0 75 chr10 37841592 37841779 -107747509 + AluJo SINE Alu 1 173 -139 469 194 22 72 chr10 37842112 37842251 -107747037 - MIR SINE MIR -72 190 59 197 315 111 74 chr10 37842544 37842590 -107746698 - MIR3 SINE MIR -3 205 162 2016 147 0 16 chr10 37842590 37842903 -107746385 - AluJb SINE Alu -4 308 1 197 315 111 74 chr10 37842903 37843018 -107746270 - MIR3 SINE MIR -46 162 38 2428 109 0 0 chr10 37843436 37843748 -107745540 - AluSx SINE Alu 0 312 1 214 190 224 0 chr10 37843864 37843922 -107745366 - MER5A DNA MER1_type -68 121 51 996 150 0 18 chr10 37843929 37844096 -107745192 - AluJb SINE Alu -13 299 136 2093 104 72 0 chr10 37844713 37844992 -107744296 + AluSx SINE Alu 1 299 -13 22 0 0 0 chr10 37845444 37845466 -107743822 + AT_rich Low_complexity Low_complexity 1 22 0 297 240 8 83 chr10 37846240 37846361 -107742927 + MIR SINE MIR 20 131 -77 23 0 0 0 chr10 37847158 37847181 -107742107 + AT_rich Low_complexity Low_complexity 1 23 0 1984 152 0 3 chr10 37847251 37847547 -107741741 + AluSx SINE Alu 1 295 -17 782 117 0 8 chr10 37847686 37847806 -107741482 - L1PB3 LINE L1 -1 6153 6035 575 196 0 15 chr10 37848067 37848200 -107741088 - L1MB8 LINE L1 -8 6170 6040 23 0 0 0 chr10 37848243 37848266 -107741022 + AT_rich Low_complexity Low_complexity 1 23 0 1729 174 43 0 chr10 37848267 37848548 -107740740 - AluJo SINE Alu -19 293 1 764 203 44 6 chr10 37848548 37848706 -107740582 + MLT1E LTR MaLR 429 592 -1 496 327 6 0 chr10 37848707 37848872 -107740416 + ERVL LTR ERVL 4214 4379 -1385 1165 147 0 0 chr10 37849605 37849775 -107739513 + FRAM SINE Alu 1 170 -6 306 219 27 14 chr10 37849908 37849981 -107739307 + LTR16A LTR ERVL 56 129 -321 316 289 139 12 chr10 37850036 37850202 -107739086 + LTR16A LTR ERVL 246 432 -18 861 265 183 41 chr10 37850418 37850776 -107738512 + L1MC/D LINE L1 3589 3895 -2251 2175 111 46 32 chr10 37850776 37851146 -107738142 + THE1C LTR MaLR 1 375 0 861 265 183 41 chr10 37851146 37851737 -107737551 + L1MC/D LINE L1 3895 4673 -1473 1476 184 44 23 chr10 37851737 37852182 -107737106 + MLT1D LTR MaLR 1 505 0 2105 141 10 0 chr10 37852466 37852771 -107736517 + AluSx SINE Alu 1 308 -4 248 275 88 21 chr10 37852786 37853026 -107736262 + L1MC/D LINE L1 5024 5279 -867 2133 118 3 20 chr10 37853030 37853334 -107735954 - AluSx SINE Alu -13 299 1 2392 46 42 0 chr10 37853353 37853637 -107735651 + AluY SINE Alu 1 296 -15 597 269 134 54 chr10 37853644 37854039 -107735249 + L1MC/D LINE L1 5284 5744 -426 1689 131 24 40 chr10 37854039 37854336 -107734952 + AluSq SINE Alu 21 312 -1 597 269 134 54 chr10 37854336 37854439 -107734849 + L1MC/D LINE L1 5744 5837 -333 1961 143 7 0 chr10 37854549 37854842 -107734446 + AluJo SINE Alu 1 295 -17 441 244 79 107 chr10 37854847 37855138 -107734150 + MLT1J LTR MaLR 229 511 0 884 161 0 7 chr10 37855326 37855463 -107733825 - AluJo SINE Alu -176 136 1 191 22 67 44 chr10 37855665 37855710 -107733578 + A-rich Low_complexity Low_complexity 2 47 0 346 309 34 77 chr10 37856162 37856395 -107732893 + L1M4 LINE L1 3695 3917 -2229 2220 94 3 7 chr10 37856596 37856910 -107732378 - AluSx SINE Alu 0 313 1 492 109 0 0 chr10 37856930 37856994 -107732294 - U6 snRNA snRNA -43 64 1 1765 156 10 49 chr10 37857482 37857623 -107731665 + AluJo SINE Alu 1 146 -166 2107 95 35 0 chr10 37857623 37857906 -107731382 + AluSp SINE Alu 1 293 -20 1765 156 10 49 chr10 37857906 37858072 -107731216 + AluJo SINE Alu 146 296 -16 196 256 154 13 chr10 37858404 37858482 -107730806 + MER5A DNA MER1_type 74 162 -27 2316 138 62 7 chr10 37858490 37858896 -107730392 + MSTC LTR MaLR 1 428 0 2354 89 0 7 chr10 37859008 37859312 -107729976 + AluSx SINE Alu 1 302 -10 709 232 12 24 chr10 37859319 37859487 -107729801 + FRAM SINE Alu 1 162 -14 2301 60 0 3 chr10 37859487 37859807 -107729481 + AluY SINE Alu 1 319 0 7289 163 31 75 chr10 37859809 37860409 -107728879 - LTR49-int LTR ERV1 -1915 4416 3791 1965 151 0 0 chr10 37860409 37860701 -107728587 - AluSx SINE Alu -10 302 11 7289 163 31 75 chr10 37860701 37861333 -107727955 - LTR49-int LTR ERV1 -2540 3791 3133 1536 199 0 7 chr10 37861333 37861615 -107727673 + AluJb SINE Alu 29 308 -4 7289 163 31 75 chr10 37861615 37861900 -107727388 - LTR49-int LTR ERV1 -3198 3133 2978 2503 77 3 0 chr10 37861900 37862211 -107727077 + AluSp SINE Alu 1 312 -1 7289 163 31 75 chr10 37862211 37862381 -107726907 - LTR49-int LTR ERV1 -3353 2978 2802 375 181 69 0 chr10 37862399 37862471 -107726817 - LTR49-int LTR ERV1 -4739 1592 1516 369 274 0 0 chr10 37862475 37862548 -107726740 - tRNA-Glu-GAG tRNA tRNA 0 75 3 1966 152 17 51 chr10 37862548 37862840 -107726448 - LTR49-int LTR ERV1 -3271 1609 1309 2203 107 3 7 chr10 37862840 37863139 -107726149 + AluSx SINE Alu 1 298 -14 1966 152 17 51 chr10 37863139 37863533 -107725755 - LTR49-int LTR ERV1 -3571 1309 575 1211 140 0 0 chr10 37863534 37863712 -107725576 + AluSg/x SINE Alu 131 308 -2 1834 168 54 21 chr10 37863713 37864101 -107725187 - LTR49-int LTR ERV1 -4629 1317 15 3158 139 49 37 chr10 37864117 37864275 -107725013 - LTR49 LTR ERV1 0 595 440 2169 102 17 3 chr10 37864275 37864569 -107724719 - AluSx SINE Alu -12 300 3 3158 139 49 37 chr10 37864569 37864580 -107724708 - LTR49 LTR ERV1 -155 440 431 2494 58 0 10 chr10 37864580 37864874 -107724414 - AluY SINE Alu -20 291 1 3158 139 49 37 chr10 37864874 37865291 -107723997 - LTR49 LTR ERV1 -164 431 1 456 188 21 0 chr10 37865537 37865633 -107723655 - MER53 DNA DNA -90 99 2 22 35 0 0 chr10 37865637 37865666 -107723622 + AT_rich Low_complexity Low_complexity 1 29 0 1447 82 10 5 chr10 37865862 37866058 -107723230 - AluSg/x SINE Alu -4 308 112 2233 77 0 21 chr10 37866080 37866386 -107722902 + AluSc SINE Alu 1 300 0 2352 115 0 0 chr10 37866448 37866760 -107722528 + AluSx SINE Alu 1 312 0 1505 147 98 11 chr10 37866773 37867039 -107722249 + AluJo SINE Alu 1 289 -23 411 149 27 0 chr10 37867186 37867260 -107722028 - AluSx SINE Alu -1 311 236 1510 97 0 5 chr10 37867260 37867455 -107721833 - AluSx SINE Alu -118 194 1 873 197 93 73 chr10 37867630 37867785 -107721503 - AluJo SINE Alu -7 295 130 1636 186 0 47 chr10 37867785 37868107 -107721181 - AluJo SINE Alu -5 307 1 873 197 93 73 chr10 37868107 37868240 -107721048 - AluJo SINE Alu -172 130 1 2021 122 36 10 chr10 37868549 37868673 -107720615 + AluSx SINE Alu 1 120 -192 2439 71 0 7 chr10 37868673 37868970 -107720318 + AluY SINE Alu 1 295 -16 2021 122 36 10 chr10 37868970 37869148 -107720140 + AluSx SINE Alu 120 311 -1 972 189 0 0 chr10 37869187 37869351 -107719937 - FRAM SINE Alu -12 164 1 423 292 33 0 chr10 37869542 37869662 -107719626 + L2 LINE L2 3190 3313 0 2829 173 55 33 chr10 37869691 37869756 -107719532 - L1MB2 LINE L1 -4 6167 6105 1903 171 13 0 chr10 37869756 37870060 -107719228 - AluSx SINE Alu -4 308 1 2829 173 55 33 chr10 37870060 37870634 -107718654 - L1MB2 LINE L1 -66 6105 5514 2220 101 0 16 chr10 37870982 37871289 -107717999 + AluSg SINE Alu 1 302 -8 2271 141 95 0 chr10 37871430 37871820 -107717468 - MSTA LTR MaLR -1 427 1 2362 112 0 0 chr10 37871929 37872241 -107717047 + AluSx SINE Alu 1 312 0 1956 144 30 3 chr10 37872911 37873210 -107716078 + AluJo SINE Alu 1 307 -5 2522 61 0 0 chr10 37873210 37873559 -107715729 + AluY SINE Alu 17 365 0 2250 110 0 16 chr10 37873961 37874279 -107715009 + AluSq SINE Alu 1 313 0 818 208 0 0 chr10 37874302 37874456 -107714832 + AluJb SINE Alu 147 300 -12 1439 180 51 31 chr10 37874547 37874841 -107714447 - AluSx SINE Alu -2 300 1 2048 128 0 42 chr10 37875371 37875512 -107713776 + AluSx SINE Alu 5 150 -162 2525 73 0 0 chr10 37875512 37875815 -107713473 + AluY SINE Alu 1 303 -8 2048 128 0 42 chr10 37875815 37875985 -107713303 + AluSx SINE Alu 150 303 -9 517 319 28 22 chr10 37876033 37876215 -107713073 + MER5A DNA MER1_type 7 189 0 570 78 13 0 chr10 37876559 37876636 -107712652 - U6 snRNA snRNA -1 106 29 679 211 0 0 chr10 37876715 37876838 -107712450 + FLAM_C SINE Alu 2 124 -19 1881 181 0 0 chr10 37877189 37877488 -107711800 - AluJb SINE Alu -13 299 1 458 157 22 11 chr10 37877562 37877651 -107711637 - Cheshire DNA MER1_type -16 2404 2315 * 7293 181 41 31 chr10 37877650 37877883 -107711405 - Cheshire DNA MER1_type -343 2077 1848 2589 55 0 3 chr10 37877883 37878192 -107711096 + AluY SINE Alu 1 308 -3 7293 181 41 31 chr10 37878192 37878859 -107710429 - Cheshire DNA MER1_type -572 1848 1189 1430 175 3 92 chr10 37878859 37879174 -107710114 - AluJo SINE Alu -22 290 4 7293 181 41 31 chr10 37879174 37879474 -107709814 - Cheshire DNA MER1_type -1231 1189 894 2520 60 0 7 chr10 37879474 37879776 -107709512 - AluY SINE Alu -11 300 1 7293 181 41 31 chr10 37879776 37880148 -107709140 - Cheshire DNA MER1_type -1526 894 487 2055 132 19 13 chr10 37880150 37880460 -107708828 + AluJb SINE Alu 1 312 0 7148 155 33 90 chr10 37880470 37880917 -107708371 - L1M4 LINE L1 -3267 3115 2644 1831 127 91 7 chr10 37880917 37881193 -107708095 - AluSx SINE Alu -9 303 5 7148 155 33 90 chr10 37881193 37881208 -107708080 - L1M4 LINE L1 -3738 2644 2630 1851 171 0 0 chr10 37881208 37881494 -107707794 - AluJb SINE Alu -26 286 1 7148 155 33 90 chr10 37881494 37882053 -107707235 - L1M4 LINE L1 -3752 2630 2041 2320 94 7 7 chr10 37882053 37882362 -107706926 + AluSg1 SINE Alu 1 309 0 7148 155 33 90 chr10 37882362 37882909 -107706379 - L1M4 LINE L1 -4341 2041 1711 746 220 0 0 chr10 37882909 37883041 -107706247 - FLAM_A SINE Alu -1 132 1 7148 155 33 90 chr10 37883041 37883685 -107705603 - L1M4 LINE L1 -4671 1711 1032 660 109 0 0 chr10 37883685 37883777 -107705511 + AluSg/x SINE Alu 205 296 -13 3580 177 50 33 chr10 37883781 37884262 -107705026 - L1M4 LINE L1 -5620 764 264 2115 96 20 3 chr10 37884262 37884554 -107704734 + AluSg SINE Alu 5 301 -9 3580 177 50 33 chr10 37884554 37884805 -107704483 - L1M4 LINE L1 -6120 264 19 1104 192 123 0 chr10 37884885 37885088 -107704200 - AluJo SINE Alu -84 228 1 2244 108 0 29 chr10 37885095 37885411 -107703877 - AluSx SINE Alu -5 307 1 215 386 0 11 chr10 37886142 37886230 -107703058 + MER5B DNA MER1_type 6 92 -86 1331 221 42 0 chr10 37886449 37886737 -107702551 + AluJb SINE Alu 12 310 0 1414 170 0 63 chr10 37886744 37886839 -107702449 + AluJo SINE Alu 37 136 -176 2194 111 13 7 chr10 37886839 37887137 -107702151 - AluSx SINE Alu -12 300 1 1414 170 0 63 chr10 37887137 37887312 -107701976 + AluJo SINE Alu 136 290 -22 2216 128 0 0 chr10 37887338 37887644 -107701644 + AluSq SINE Alu 1 306 -7 1572 136 21 0 chr10 37887646 37887882 -107701406 + AluSg/x SINE Alu 65 305 -5 1871 158 0 11 chr10 37887922 37888261 -107701027 - AluSx SINE Alu 0 336 1 226 281 16 0 chr10 37888520 37888535 -107700753 + GA-rich Low_complexity Low_complexity 3 16 -51 1869 135 0 50 chr10 37888535 37888674 -107700614 + AluJo SINE Alu 1 145 -167 2555 68 0 3 chr10 37888674 37888984 -107700304 + AluY SINE Alu 1 309 -2 1869 135 0 50 chr10 37888984 37889170 -107700118 + AluJo SINE Alu 145 312 0 226 281 16 0 chr10 37889170 37889218 -107700070 + GA-rich Low_complexity Low_complexity 16 67 0 4043 84 25 4 chr10 37889277 37889835 -107699453 - L1PA11 LINE L1 -4 6170 5601 956 18 0 0 chr10 37889836 37889947 -107699341 - L1PA4 LINE L1 0 6155 6045 2397 82 27 62 chr10 37889947 37890247 -107699041 - L1PA11 LINE L1 -551 5623 5335 1740 117 101 0 chr10 37890247 37890528 -107698760 - AluSx SINE Alu 0 307 1 2397 82 27 62 chr10 37890528 37890706 -107698582 - L1PA11 LINE L1 -839 5335 5152 2213 103 0 67 chr10 37891668 37891999 -107697289 - AluSx SINE Alu -3 309 1 2267 97 7 3 chr10 37892402 37892700 -107696588 + AluSq SINE Alu 2 300 -13 830 188 12 24 chr10 37892763 37892928 -107696360 + FRAM SINE Alu 3 165 -1 360 106 0 141 chr10 37893490 37893516 -107695772 - LTR43 LTR ERV1 0 602 574 1631 137 129 14 chr10 37893516 37893794 -107695494 - AluSx SINE Alu -2 310 1 360 106 0 141 chr10 37893794 37893832 -107695456 - LTR43 LTR ERV1 -28 574 550 742 171 0 0 chr10 37893832 37893949 -107695339 + FLAM_C SINE Alu 2 118 -15 360 106 0 141 chr10 37893949 37893968 -107695320 - LTR43 LTR ERV1 -52 550 530 2589 256 48 28 chr10 37893968 37894894 -107694394 - MLT-int LTR MaLR -354 1381 385 1972 136 44 3 chr10 37894909 37895204 -107694084 - AluSx SINE Alu -5 307 1 2227 91 0 3 chr10 37895217 37895503 -107693785 - AluSg SINE Alu -1 309 25 1593 187 18 0 chr10 37895511 37895794 -107693494 - MLT-int LTR MaLR -1320 415 128 553 231 13 51 chr10 37895824 37895980 -107693308 - MLT1A1 LTR MaLR -215 150 1 24 32 0 0 chr10 37896123 37896154 -107693134 + AT_rich Low_complexity Low_complexity 1 31 0 2602 71 0 0 chr10 37896314 37896624 -107692664 - AluY SINE Alu -1 310 1 2892 184 25 2 chr10 37896658 37897180 -107692108 + L1MCa LINE L1 28 561 -5865 512 293 111 28 chr10 37897238 37897562 -107691726 + L2 LINE L2 855 1205 -2109 2223 89 25 0 chr10 37897605 37897886 -107691402 - AluSx SINE Alu -24 288 1 5350 95 41 1 chr10 37897890 37898650 -107690638 - L1PA13 LINE L1 0 6163 5374 490 250 40 0 chr10 37898658 37898806 -107690482 + L2 LINE L2 1228 1381 -1933 2152 122 0 10 chr10 37898807 37899103 -107690185 - AluSx SINE Alu -18 294 2 2914 286 120 38 chr10 37899242 37899625 -107689663 - HERV16 LTR ERVL -1905 3091 2741 2373 108 13 35 chr10 37899625 37899997 -107689291 - THE1B LTR MaLR 0 364 1 2914 286 120 38 chr10 37899997 37900656 -107688632 - HERV16 LTR ERVL -2255 2741 2137 2311 113 0 7 chr10 37900656 37900965 -107688323 - AluSx SINE Alu -5 307 1 2914 286 120 38 chr10 37900965 37901081 -107688207 - HERV16 LTR ERVL -2859 2137 2032 2508 65 0 0 chr10 37901081 37901374 -107687914 + AluY SINE Alu 1 293 -18 2914 286 120 38 chr10 37901374 37901777 -107687511 - HERV16 LTR ERVL -2964 2032 1687 500 325 65 68 chr10 37901774 37901977 -107687311 - HERV16 LTR ERVL -3428 1568 1366 * 2029 156 0 0 chr10 37901977 37902284 -107687004 - AluJo SINE Alu -4 308 2 500 325 65 68 chr10 37902284 37902495 -107686793 - HERV16 LTR ERVL -3630 1366 1155 1287 288 69 46 chr10 37902505 37903159 -107686129 - HERV16 LTR ERVL -3956 1040 372 370 290 14 10 chr10 37904159 37904283 -107685005 - LTR16A LTR ERVL -72 385 250 230 289 77 10 chr10 37904486 37904590 -107684698 + L2 LINE L2 1597 1707 -1607 364 263 35 88 chr10 37904650 37904710 -107684578 - MER76 LTR ERV -43 645 583 2230 129 7 0 chr10 37904710 37905013 -107684275 - AluSx SINE Alu -7 305 1 364 263 35 88 chr10 37905013 37905123 -107684165 - MER76 LTR ERV -105 583 484 1617 199 80 3 chr10 37905152 37905479 -107683809 - MER76 LTR ERV -334 354 3 553 289 28 0 chr10 37905481 37905661 -107683627 + L2 LINE L2 1729 1913 -1401 1366 138 0 0 chr10 37905727 37905916 -107683372 + AluSg/x SINE Alu 82 270 -40 1100 123 0 6 chr10 37905930 37906109 -107683179 + (GGAA)n Simple_repeat Simple_repeat 3 180 0 2689 183 47 39 chr10 37906109 37906879 -107682409 + L1MB8 LINE L1 4893 5655 -529 257 0 30 0 chr10 37906879 37906912 -107682376 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 2028 111 0 21 chr10 37906914 37907202 -107682086 - AluSg SINE Alu -28 282 1 2689 183 47 39 chr10 37907202 37907511 -107681777 + L1MB8 LINE L1 5655 6175 -9 521 273 75 0 chr10 37907521 37907708 -107681580 + L2 LINE L2 1902 2102 -1212 1871 151 3 29 chr10 37907714 37908026 -107681262 - AluJo SINE Alu -8 304 1 2247 102 20 3 chr10 37908045 37908350 -107680938 + AluSg SINE Alu 1 310 0 2184 104 0 10 chr10 37909003 37909302 -107679986 - AluY SINE Alu -15 296 1 2128 126 7 0 chr10 37909401 37909711 -107679577 + AluSx SINE Alu 1 312 0 235 302 0 0 chr10 37909717 37909780 -107679508 - L1ME3 LINE L1 -4 6158 6096 180 348 76 0 chr10 37909780 37909872 -107679416 + L2 LINE L2 2088 2186 -1128 353 235 35 35 chr10 37909879 37909994 -107679294 - L1ME1 LINE L1 -65 6101 5987 1956 228 56 17 chr10 37910012 37910604 -107678684 - L1MDa LINE L1 -2780 3760 3146 1845 130 0 63 chr10 37910608 37910924 -107678364 - AluSx SINE Alu -5 307 12 689 190 38 143 chr10 37910925 37911040 -107678248 - L1MDa LINE L1 -3861 2679 2554 1333 141 82 107 chr10 37911040 37911331 -107677957 - AluJo SINE Alu -28 284 1 689 190 38 143 chr10 37911331 37911408 -107677880 - L1MDa LINE L1 -3986 2554 2471 2266 116 3 0 chr10 37911408 37911711 -107677577 - AluSp SINE Alu -9 304 1 689 190 38 143 chr10 37911711 37911959 -107677329 - L1MDa LINE L1 -4069 2471 2287 2159 109 10 0 chr10 37911962 37912255 -107677033 - AluSx SINE Alu -16 296 1 1989 144 0 7 chr10 37912255 37912547 -107676741 - AluSx SINE Alu -10 302 13 25 0 0 0 chr10 37912867 37912892 -107676396 + AT_rich Low_complexity Low_complexity 1 25 0 1991 220 98 87 chr10 37912945 37913415 -107675873 - L1ME1 LINE L1 -17 6149 5686 763 104 0 0 chr10 37913415 37913521 -107675767 - AluSq/x SINE Alu -173 140 35 1991 220 98 87 chr10 37913521 37915166 -107674122 - L1ME1 LINE L1 -480 5686 3959 2128 128 0 16 chr10 37915191 37915497 -107673791 + AluSx SINE Alu 1 301 -11 1997 122 0 7 chr10 37915543 37915822 -107673466 + AluSg SINE Alu 1 277 -33 378 0 0 0 chr10 37915822 37915864 -107673424 + (CA)n Simple_repeat Simple_repeat 1 42 0 1162 140 6 0 chr10 37915864 37916028 -107673260 + AluSg/x SINE Alu 131 295 -17 299 179 113 0 chr10 37916028 37916134 -107673154 - L1ME1 LINE L1 -2197 3949 3832 581 165 50 0 chr10 37916144 37916265 -107673023 - L1MB7 LINE L1 0 6253 6127 842 150 0 8 chr10 37916280 37916407 -107672881 + FLAM_C SINE Alu 2 127 -16 214 182 0 0 chr10 37916409 37916453 -107672835 + A-rich Low_complexity Low_complexity 5 48 0 7701 208 40 24 chr10 37916458 37916610 -107672678 - L1MB7 LINE L1 -134 6119 5971 2131 123 10 3 chr10 37916610 37916903 -107672385 - AluSq SINE Alu -18 295 1 7701 208 40 24 chr10 37916903 37917128 -107672160 - L1MB7 LINE L1 -282 5971 5751 2307 88 3 20 chr10 37917128 37917434 -107671854 - AluSg SINE Alu -9 301 1 7701 208 40 24 chr10 37917434 37917945 -107671343 - L1MB7 LINE L1 -502 5751 5250 2180 101 9 19 chr10 37917945 37918261 -107671027 - AluSq SINE Alu 0 313 1 7701 208 40 24 chr10 37918261 37918375 -107670913 - L1MB7 LINE L1 -1003 5250 5139 2259 112 20 0 chr10 37918375 37918679 -107670609 - AluSq SINE Alu -3 310 1 7701 208 40 24 chr10 37918679 37919388 -107669900 - L1MB7 LINE L1 -1114 5139 4443 2213 113 3 7 chr10 37919388 37919688 -107669600 - AluSx SINE Alu -12 300 2 7701 208 40 24 chr10 37919688 37920619 -107668669 - L1MB7 LINE L1 -1810 4443 3436 963 136 14 0 chr10 37920628 37920775 -107668513 + AluJb SINE Alu 157 305 -7 2416 76 3 3 chr10 37920830 37921131 -107668157 - AluSp SINE Alu -12 301 1 613 186 186 0 chr10 37921131 37921298 -107667990 - L1MB3 LINE L1 -133 6050 5853 1109 160 7 28 chr10 37921300 37921540 -107667748 - L1MB4 LINE L1 -267 5913 5708 * 9783 162 30 34 chr10 37921509 37921901 -107667387 + L1P LINE L1 2872 3264 -2882 1916 159 0 3 chr10 37921901 37922209 -107667079 + AluSx SINE Alu 5 311 -1 9783 162 30 34 chr10 37922209 37923766 -107665522 + L1P LINE L1 3264 4813 -1333 258 267 13 0 chr10 37923767 37923842 -107665446 - L1ME1 LINE L1 -5 6161 6086 225 88 0 0 chr10 37923857 37923891 -107665397 - MER3 DNA MER1_type -160 49 16 1512 208 80 54 chr10 37923891 37924111 -107665177 - L1ME1 LINE L1 -143 6023 5810 1682 168 3 48 chr10 37924111 37924421 -107664867 - AluJo SINE Alu -16 296 1 1512 208 80 54 chr10 37924421 37924699 -107664589 - L1ME1 LINE L1 -356 5810 5512 * 2309 263 57 8 chr10 37924696 37925630 -107663658 - L1MB7 LINE L1 -3316 2899 1962 915 282 61 55 chr10 37925673 37926163 -107663125 - L1MEc LINE L1 -5881 515 23 2300 96 0 10 chr10 37926416 37926707 -107662581 - AluSq SINE Alu -25 288 1 216 234 21 0 chr10 37926756 37926803 -107662485 - MIR SINE MIR -201 61 14 1907 132 13 23 chr10 37927228 37927532 -107661756 - AluJb SINE Alu -11 301 1 254 0 26 26 chr10 37927539 37927577 -107661711 + (TTTA)n Simple_repeat Simple_repeat 2 68 0 2166 90 4 7 chr10 37927577 37927856 -107661432 - AluSc SINE Alu -1 319 5 2389 93 0 0 chr10 37927910 37928210 -107661078 - AluSx SINE Alu -12 300 1 1697 137 48 22 chr10 37928513 37928784 -107660504 + AluJo SINE Alu 1 278 -34 2223 87 4 0 chr10 37928784 37929060 -107660228 - AluSp SINE Alu -17 296 20 353 85 0 34 chr10 37929086 37929097 -107660191 + (GGAA)n Simple_repeat Simple_repeat 4 14 -46 2511 76 3 0 chr10 37929097 37929400 -107659888 + AluSp SINE Alu 3 306 -7 353 85 0 34 chr10 37929400 37929447 -107659841 + (GGAA)n Simple_repeat Simple_repeat 14 60 0 2848 13 0 3 chr10 37929897 37930209 -107659079 - AluYa5 SINE Alu 0 311 1 1028 127 153 0 chr10 37930251 37930440 -107658848 - MER20 DNA MER1_type 0 219 2 2291 117 0 0 chr10 37931636 37931934 -107657354 - AluSx SINE Alu -14 298 1 216 226 48 24 chr10 37932256 37932340 -107656948 + CT-rich Low_complexity Low_complexity 3 88 0 333 333 91 16 chr10 37932668 37932854 -107656434 + MIR SINE MIR 62 261 -1 207 194 0 0 chr10 37933260 37933296 -107655992 + (TATATG)n Simple_repeat Simple_repeat 1 36 0 236 291 0 0 chr10 37933296 37933375 -107655913 - L1MC4 LINE L1 -1340 6702 6624 228 211 0 89 chr10 37933301 37933391 -107655897 + L1MC4 LINE L1 6614 6695 -1347 * 2314 94 3 0 chr10 37933418 37933716 -107655572 - AluSx SINE Alu -13 299 1 193 304 51 11 chr10 37933728 37933815 -107655473 - MIR SINE MIR -66 142 53 1726 164 7 18 chr10 37933866 37934147 -107655141 + AluJo SINE Alu 1 278 -34 189 343 122 14 chr10 37934448 37934734 -107654554 - L2 LINE L2 -785 2529 2213 1900 161 13 0 chr10 37935022 37935320 -107653968 - AluJo SINE Alu -10 302 1 300 106 0 0 chr10 37935343 37935390 -107653898 - L1MA4A LINE L1 -5 6298 6252 222 37 0 0 chr10 37935390 37935417 -107653871 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 2255 85 0 3 chr10 37935417 37935699 -107653589 - AluY SINE Alu -30 281 1 3463 137 48 5 chr10 37935699 37936299 -107652989 - L1MA4 LINE L1 -320 5980 5355 265 232 29 0 chr10 37936388 37936457 -107652831 - Charlie7 DNA MER1_type -1923 689 619 864 121 0 0 chr10 37936458 37936574 -107652714 + AluJb SINE Alu 1 116 -196 450 0 0 0 chr10 37936574 37936624 -107652664 + (CAAAA)n Simple_repeat Simple_repeat 4 53 0 1897 144 0 23 chr10 37936635 37936940 -107652348 + AluJo SINE Alu 6 303 -9 1875 156 0 3 chr10 37936994 37937277 -107652011 + AluJo SINE Alu 1 282 -30 1821 183 0 0 chr10 37937303 37937592 -107651696 + AluJo SINE Alu 1 289 -23 2399 89 0 13 chr10 37937695 37938008 -107651280 + AluY SINE Alu 1 309 -2 838 212 6 0 chr10 37938349 37938514 -107650774 - FRAM SINE Alu 0 166 1 258 291 19 39 chr10 37938602 37938705 -107650583 + MIR SINE MIR 30 130 -78 2001 158 0 10 chr10 37939290 37939600 -107649688 + AluJb SINE Alu 1 307 -5 240 193 217 0 chr10 37939642 37939725 -107649563 - L1ME4a LINE L1 0 6121 6021 2088 124 45 28 chr10 37939785 37940141 -107649147 - THE1B LTR MaLR -2 362 1 28 0 0 0 chr10 37940145 37940173 -107649115 + AT_rich Low_complexity Low_complexity 1 28 0 27 39 0 19 chr10 37940380 37940401 -107648887 + AT_rich Low_complexity Low_complexity 1 21 -30 2335 66 7 0 chr10 37940401 37940688 -107648600 + AluSp SINE Alu 2 290 -23 27 39 0 19 chr10 37940688 37940718 -107648570 + AT_rich Low_complexity Low_complexity 21 51 0 4709 113 26 9 chr10 37940719 37941419 -107647869 - L1PA13 LINE L1 -19 6144 5433 521 223 241 36 chr10 37941419 37941774 -107647514 - L1MB3 LINE L1 -38 6143 5740 2168 103 0 3 chr10 37942464 37942746 -107646542 - AluSx SINE Alu -31 281 1 844 169 0 0 chr10 37942763 37942887 -107646401 - FLAM_C SINE Alu -16 127 4 307 277 64 0 chr10 37942889 37942983 -107646305 - L2 LINE L2 -8 3305 3206 1830 154 7 0 chr10 37943546 37943857 -107645431 + AluJo SINE Alu 1 313 0 215 279 12 12 chr10 37944354 37944440 -107644848 + (TAAAG)n Simple_repeat Simple_repeat 2 87 0 195 42 0 0 chr10 37944454 37944478 -107644810 + (TCCCC)n Simple_repeat Simple_repeat 5 28 0 242 182 0 0 chr10 37944523 37944567 -107644721 - L1M4 LINE L1 -2658 3488 3445 1214 186 43 9 chr10 37944569 37944800 -107644488 - AluJo SINE Alu -19 293 55 723 229 17 40 chr10 37944833 37945033 -107644255 + FRAM SINE Alu 1 176 0 273 303 110 0 chr10 37945035 37945190 -107644098 + L1ME1 LINE L1 3280 3451 -2695 1093 84 0 0 chr10 37945193 37945324 -107643964 + AluSg SINE Alu 1 131 -179 1676 124 0 4 chr10 37945336 37945570 -107643718 + AluSg/x SINE Alu 71 303 -9 5297 205 72 53 chr10 37945570 37946459 -107642829 + L1ME1 LINE L1 3461 4331 -1835 1678 154 95 0 chr10 37946459 37946732 -107642556 + AluJo SINE Alu 1 299 -13 5297 205 72 53 chr10 37946732 37946994 -107642294 + L1ME1 LINE L1 4331 4586 -1580 1872 159 3 20 chr10 37946994 37947290 -107641998 + AluJb SINE Alu 5 295 -17 5297 205 72 53 chr10 37947290 37947677 -107641611 + L1ME1 LINE L1 4586 4964 -1202 2031 117 10 14 chr10 37947677 37947968 -107641320 + AluSc SINE Alu 5 294 -15 5297 205 72 53 chr10 37947968 37948529 -107640759 + L1ME1 LINE L1 4964 5513 -653 2142 114 3 10 chr10 37948529 37948828 -107640460 - AluSx SINE Alu -15 297 1 5297 205 72 53 chr10 37948828 37949336 -107639952 + L1ME1 LINE L1 5513 6112 -54 2086 128 7 3 chr10 37949336 37949632 -107639656 + AluSx SINE Alu 1 297 -15 2252 98 3 0 chr10 37950781 37951067 -107638221 - AluSx SINE Alu -15 297 11 2067 97 45 10 chr10 37951079 37951369 -107637919 - AluSp SINE Alu -13 300 1 1784 169 20 10 chr10 37951396 37951692 -107637596 + AluJo SINE Alu 1 299 -13 235 214 107 0 chr10 37951693 37951749 -107637539 - L1ME1 LINE L1 -5 6161 6100 421 98 16 0 chr10 37951749 37951810 -107637478 - Alu SINE Alu -13 299 238 1537 163 56 11 chr10 37952216 37952486 -107636802 + AluJo SINE Alu 1 282 -30 225 0 0 0 chr10 37952489 37952514 -107636774 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 355 253 102 16 chr10 37952850 37953036 -107636252 - L1MC4a LINE L1 -1896 5912 5711 381 269 56 56 chr10 37954706 37954866 -107634422 + L1ME4a LINE L1 5544 5703 -418 1064 92 0 0 chr10 37954869 37954999 -107634289 + AluY SINE Alu 1 130 -181 366 237 83 26 chr10 37955013 37955169 -107634119 + L1ME4a LINE L1 5698 5862 -259 209 326 54 0 chr10 37955423 37955515 -107633773 - L2 LINE L2 -537 2777 2681 315 259 123 57 chr10 37956147 37956351 -107632937 - MLT1J LTR MaLR -11 500 206 2151 104 3 16 chr10 37956351 37956658 -107632630 - AluSx SINE Alu -9 303 1 315 259 123 57 chr10 37956658 37956733 -107632555 - MLT1J LTR MaLR -305 206 137 194 338 100 25 chr10 37957507 37957587 -107631701 + L2 LINE L2 3139 3224 -48 2410 80 0 0 chr10 37958214 37958503 -107630785 - AluY SINE Alu -22 289 1 693 144 0 18 chr10 37958639 37958750 -107630538 - FRAM SINE Alu -15 161 53 256 148 37 19 chr10 37960555 37960609 -107628679 + MIR3 SINE MIR 103 157 -51 198 0 0 0 chr10 37960928 37960950 -107628338 + (CAAAG)n Simple_repeat Simple_repeat 2 23 0 591 180 49 16 chr10 37961174 37961296 -107627992 + AluJ SINE Alu 1 126 -186 353 140 9 140 chr10 37961349 37961456 -107627832 + AluYa5 SINE Alu 87 179 -122 252 0 9 0 chr10 37961456 37961527 -107627761 + (CA)n Simple_repeat Simple_repeat 2 29 0 1147 131 0 22 chr10 37961528 37961711 -107627577 + AluJ SINE Alu 134 312 0 229 178 27 27 chr10 37962027 37962100 -107627188 + G-rich Low_complexity Low_complexity 4 76 0 24 77 0 0 chr10 37962297 37962349 -107626939 + GC_rich Low_complexity Low_complexity 1 52 0 236 143 18 0 chr10 37962441 37962497 -107626791 + (CCG)n Simple_repeat Simple_repeat 3 59 0 200 161 18 36 chr10 37962550 37962606 -107626682 + C-rich Low_complexity Low_complexity 1 55 0 198 315 14 0 chr10 37963947 37964020 -107625268 + MIR SINE MIR 183 256 -6 241 295 32 11 chr10 37964824 37964919 -107624369 + MER5B DNA MER1_type 82 178 0 206 266 0 16 chr10 37965021 37965085 -107624203 + (TA)n Simple_repeat Simple_repeat 1 63 0 465 285 66 0 chr10 37965646 37965797 -107623491 - MIR SINE MIR -36 226 66 792 263 152 42 chr10 37966085 37966101 -107623187 + L2 LINE L2 2409 2422 -891 2277 113 3 0 chr10 37966101 37966403 -107622885 - AluSx SINE Alu -9 303 1 792 263 152 42 chr10 37966403 37967196 -107622092 + L2 LINE L2 2422 3309 -4 309 261 11 11 chr10 37968137 37968225 -107621063 - MIR3 SINE MIR -39 169 82 338 271 34 8 chr10 37968316 37968434 -107620854 - MIR SINE MIR -108 154 34 2136 104 52 3 chr10 37968600 37968888 -107620400 - AluSx SINE Alu -10 302 1 2360 108 0 0 chr10 37968982 37969289 -107619999 - AluSq SINE Alu -6 307 1 1932 94 27 106 chr10 37970009 37970168 -107619120 + AluYb8 SINE Alu 1 122 -196 6353 28 1 8 chr10 37970168 37970912 -107618376 - L1PA4 LINE L1 0 6155 5417 1932 94 27 106 chr10 37970912 37971083 -107618205 + AluYb8 SINE Alu 122 305 -13 1883 120 22 4 chr10 37972242 37972516 -107616772 - AluJo SINE Alu -23 289 11 221 0 0 33 chr10 37972548 37972578 -107616710 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 335 254 36 27 chr10 37972582 37972692 -107616596 - MARNA DNA Mariner -381 205 95 1154 190 49 9 chr10 37974561 37974787 -107614501 - MER8 DNA MER2_type -4 235 1 542 185 136 82 chr10 37975260 37975444 -107613844 - MER20 DNA MER1_type 0 219 26 21 57 0 0 chr10 37977269 37977304 -107611984 + AT_rich Low_complexity Low_complexity 1 35 0 191 362 78 7 chr10 37978203 37978344 -107610944 - L2 LINE L2 -42 3230 3080 1940 166 0 3 chr10 37978518 37978820 -107610468 - AluJb SINE Alu -5 307 7 1363 204 123 110 chr10 37979407 37979784 -107609504 - MLT1F1 LTR MaLR 0 567 154 2216 117 3 0 chr10 37979784 37980084 -107609204 - AluSx SINE Alu -11 301 1 1363 204 123 110 chr10 37980084 37980241 -107609047 - MLT1F1 LTR MaLR -413 154 1 2316 113 0 3 chr10 37980995 37981306 -107607982 + AluSx SINE Alu 2 311 -1 21 0 0 0 chr10 37981336 37981357 -107607931 + AT_rich Low_complexity Low_complexity 1 21 0 485 312 139 20 chr10 37982437 37982761 -107606527 + L2 LINE L2 2715 2999 -314 351 89 0 0 chr10 37982761 37982817 -107606471 + (CCCCAG)n Simple_repeat Simple_repeat 4 59 0 485 312 139 20 chr10 37982817 37983015 -107606273 + L2 LINE L2 2999 3309 -4 2200 173 199 22 chr10 37983061 37983655 -107605633 - L1MC4 LINE L1 -458 7584 6886 21 0 0 0 chr10 37983815 37983836 -107605452 + AT_rich Low_complexity Low_complexity 1 21 0 1790 228 87 27 chr10 37984193 37984720 -107604568 - REP3 LTR ERV 0 562 4 2920 146 42 43 chr10 37985047 37985091 -107604197 - L1MB3 LINE L1 -9 6174 6131 207 0 0 0 chr10 37985091 37985114 -107604174 + (TTA)n Simple_repeat Simple_repeat 2 24 0 725 189 0 0 chr10 37985114 37985236 -107604052 - FLAM_C SINE Alu -7 126 5 2920 146 42 43 chr10 37985236 37985744 -107603544 - L1MB3 LINE L1 -50 6133 5622 1943 166 16 0 chr10 37985874 37986181 -107603107 - AluJo SINE Alu 0 312 1 23 54 0 0 chr10 37986293 37986330 -107602958 + AT_rich Low_complexity Low_complexity 1 37 0 2207 110 7 0 chr10 37986464 37986756 -107602532 - AluSg SINE Alu -16 294 1 309 314 105 14 chr10 37986789 37986999 -107602289 - L1ME4a LINE L1 -129 5992 5764 451 127 0 0 chr10 37987401 37987464 -107601824 + MER46B DNA MER2_type 3 65 -296 1570 129 95 24 chr10 37987499 37987794 -107601494 + MER46B DNA MER2_type 45 235 -1 1665 174 37 38 chr10 37988320 37989084 -107600204 - SVA Other Other -518 868 388 790 168 51 30 chr10 37991253 37991450 -107597838 + L1MD3 LINE L1 7779 7979 -16 1220 170 15 0 chr10 37992303 37992509 -107596779 + MER3 DNA MER1_type 1 209 0 239 284 147 0 chr10 37992730 37992832 -107596456 - L1ME LINE L1 -219 5902 5786 417 222 210 18 chr10 37992909 37993076 -107596212 + MIR SINE MIR 64 262 0 194 326 65 11 chr10 37993772 37993864 -107595424 + MIR SINE MIR 33 129 -79 192 77 0 0 chr10 37995701 37995727 -107593561 + (CATATA)n Simple_repeat Simple_repeat 1 26 0 2524 57 0 0 chr10 37995754 37996050 -107593238 - AluY SINE Alu -15 296 1 2393 87 0 0 chr10 37996314 37996614 -107592674 - AluY SINE Alu -11 300 1 187 323 73 10 chr10 37996713 37996809 -107592479 + L2 LINE L2 3139 3240 -32 2255 102 7 0 chr10 37998304 37998597 -107590691 - AluSq SINE Alu -18 295 1 421 309 59 15 chr10 37998732 37998936 -107590352 + MIR SINE MIR 36 248 -14 2119 159 50 10 chr10 37999133 37999517 -107589771 + Tigger2a DNA MER2_type 36 434 0 26 0 0 0 chr10 37999863 37999889 -107589399 + AT_rich Low_complexity Low_complexity 1 26 0 1842 193 55 38 chr10 38000695 38001147 -107588141 - MLT1D LTR MaLR 0 505 46 3002 171 112 22 chr10 38001740 38001793 -107587495 - Charlie1 DNA MER1_type 0 2761 2714 3626 149 22 11 chr10 38001793 38002065 -107587223 + L1MB7 LINE L1 5518 5786 -398 1475 157 8 8 chr10 38002065 38002301 -107586987 + MER46A DNA MER2_type 1 236 0 3626 149 22 11 chr10 38002301 38002621 -107586667 + L1MB7 LINE L1 5786 6120 -64 3575 140 43 12 chr10 38002621 38003205 -107586083 + MER7C DNA MER2_type 1 602 0 3626 149 22 11 chr10 38003205 38003254 -107586034 + L1MB7 LINE L1 6120 6167 -17 3002 171 112 22 chr10 38003254 38003956 -107585332 - Charlie1 DNA MER1_type -47 2714 1938 222 374 15 33 chr10 38004296 38004491 -107584797 - MIR SINE MIR -51 211 25 1620 175 59 27 chr10 38004649 38005054 -107584234 - LTR52 LTR ERVL -3 418 1 234 233 55 27 chr10 38006104 38006177 -107583111 - L1MC5 LINE L1 -50 7911 7837 369 265 15 23 chr10 38006212 38006344 -107582944 - MIR SINE MIR -51 211 81 2701 209 127 27 chr10 38006589 38006877 -107582411 + MER97a DNA MER1_type 1 259 -635 2333 94 0 19 chr10 38006877 38007186 -107582102 + AluSx SINE Alu 1 303 -9 2701 209 127 27 chr10 38007186 38007710 -107581578 + MER97a DNA MER1_type 259 894 0 815 185 57 38 chr10 38008084 38008295 -107580993 + MER20 DNA MER1_type 1 215 -4 382 244 23 38 chr10 38008295 38008426 -107580862 + MIR SINE MIR 86 214 -48 831 270 39 13 chr10 38008572 38008805 -107580483 - MER8 DNA MER2_type 0 239 1 2342 108 3 0 chr10 38008902 38009207 -107580081 - AluSq SINE Alu -7 306 1 241 198 77 33 chr10 38009433 38009524 -107579764 + MER103 DNA DNA 11 105 -61 22 0 0 0 chr10 38009552 38009574 -107579714 + AT_rich Low_complexity Low_complexity 1 22 0 3053 108 19 13 chr10 38009730 38010192 -107579096 - MER4C LTR ERV1 0 465 1 413 188 148 16 chr10 38011021 38011149 -107578139 + MER97a DNA MER1_type? 545 689 -205 439 226 11 21 chr10 38011153 38011246 -107578042 - L1ME LINE L1 -585 5579 5488 1912 212 56 25 chr10 38014257 38014742 -107574546 - MLT1D LTR MaLR 0 505 6 222 118 0 0 chr10 38014822 38014856 -107574432 + (CTA)n Simple_repeat Simple_repeat 2 35 0 211 253 84 21 chr10 38014878 38014973 -107574315 + L2 LINE L2 3162 3262 -10 2203 114 7 0 chr10 38015039 38015336 -107573952 - AluSg SINE Alu -11 299 1 22 0 0 0 chr10 38016400 38016422 -107572866 + AT_rich Low_complexity Low_complexity 1 22 0 205 155 0 155 chr10 38016583 38016641 -107572647 + MIR SINE MIR 56 104 -158 3190 113 18 68 chr10 38016665 38017238 -107572050 - LTR10A LTR ERV1 -65 544 1 248 312 43 0 chr10 38017250 38017343 -107571945 + MIR SINE MIR 120 216 -46 221 325 0 12 chr10 38017390 38017473 -107571815 + CT-rich Low_complexity Low_complexity 3 84 0 229 193 18 0 chr10 38017660 38017717 -107571571 - L1ME4a LINE L1 -9 6112 6055 222 311 77 68 chr10 38017929 38018164 -107571124 - L2 LINE L2 -44 3228 2992 1005 211 55 7 chr10 38018433 38018814 -107570474 + MER31B LTR ERV1 1 466 0 674 124 124 0 chr10 38019404 38019517 -107569771 + FLAM_A SINE Alu 4 130 -3 1299 177 23 110 chr10 38020853 38021345 -107567943 - MER31A LTR ERV1 0 466 1 236 323 71 8 chr10 38021628 38021755 -107567533 + L2 LINE L2 3137 3271 -1 830 164 0 22 chr10 38073802 38073936 -107515352 - FLAM_C SINE Alu -1 132 2 2021 191 81 37 chr10 38074430 38074922 -107514366 - MER68 LTR ERV1 -48 514 1 247 360 35 0 chr10 38075989 38076075 -107513213 - L2 LINE L2 -1 3271 3183 693 254 122 5 chr10 38076129 38076342 -107512946 + MIR SINE MIR 23 260 -2 1111 269 290 17 chr10 38076387 38078082 -107511206 - L2 LINE L2 -280 3033 836 197 308 207 12 chr10 38078171 38078340 -107510948 - L2 LINE L2 -2997 317 116 200 225 0 11 chr10 38078636 38078725 -107510563 + CT-rich Low_complexity Low_complexity 1 88 0 474 348 3 0 chr10 38078876 38079094 -107510194 + CT-rich Low_complexity Low_complexity 1 218 0 181 194 16 16 chr10 38079134 38079196 -107510092 + (TCTG)n Simple_repeat Simple_repeat 2 63 0 222 236 0 42 chr10 38079196 38079268 -107510020 + CT-rich Low_complexity Low_complexity 3 71 0 561 252 98 138 chr10 38079423 38080384 -107508904 + L1MEd LINE L1 12 926 -5193 2116 182 3 11 chr10 38080384 38080746 -107508542 + MLT1A1 LTR MaLR 3 361 -4 561 252 98 138 chr10 38080746 38080867 -107508421 + L1MEd LINE L1 926 1050 -5069 547 280 151 11 chr10 38080920 38081191 -107508097 + L1M4 LINE L1 3931 4239 -1907 200 280 43 75 chr10 38081649 38081742 -107507546 - L2 LINE L2 -31 3241 3152 959 159 0 0 chr10 38081820 38081971 -107507317 + FRAM SINE Alu 1 146 -30 243 0 0 0 chr10 38082873 38082900 -107506388 + (CTCA)n Simple_repeat Simple_repeat 1 27 0 323 167 0 94 chr10 38083491 38083587 -107505701 - L1ME4a LINE L1 -2 6119 6033 1162 161 45 36 chr10 38083648 38083872 -107505416 - MER46A DNA MER2_type -10 226 1 865 135 7 50 chr10 38084517 38084658 -107504630 - AluJo SINE Alu -177 135 1 350 312 64 50 chr10 38084940 38085158 -107504130 - MIR SINE MIR -11 251 31 487 255 67 27 chr10 38086267 38086416 -107502872 - MER104 DNA Tc2 -21 159 5 2360 70 27 3 chr10 38086871 38087171 -107502117 + AluY SINE Alu 1 307 -4 392 127 14 14 chr10 38088364 38088435 -107500853 + Charlie2a DNA MER1_type 1467 1537 -1325 272 154 19 0 chr10 38088491 38088543 -107500745 + Charlie2a DNA MER1_type 1523 1575 -1287 21 0 0 0 chr10 38089898 38089919 -107499369 + AT_rich Low_complexity Low_complexity 1 21 0 286 311 179 10 chr10 38091163 38091359 -107497929 - MIR SINE MIR -6 256 28 2508 164 55 2 chr10 38092855 38093312 -107495976 + MER31A LTR ERV1 5 485 0 224 286 52 13 chr10 38093918 38093995 -107495293 - MIR SINE MIR -15 247 168 499 69 0 28 chr10 38094021 38094093 -107495195 - MER30 DNA MER1_type -160 70 1 214 246 0 0 chr10 38094296 38094353 -107494935 - MIR SINE MIR -141 121 65 1496 118 41 0 chr10 38095001 38095221 -107494067 + MER30 DNA MER1_type 2 230 0 312 214 36 62 chr10 38095854 38095966 -107493322 + L2 LINE L2 3150 3258 -55 2334 82 10 10 chr10 38096636 38096930 -107492358 + AluY SINE Alu 1 294 -17 961 173 0 62 chr10 38098531 38098710 -107490578 + FRAM SINE Alu 1 167 -9 230 262 78 10 chr10 38098936 38099066 -107490222 - MIR SINE MIR -76 132 6 351 280 106 18 chr10 38100474 38100692 -107488596 - MER112 DNA MER1_type -7 253 17 395 249 76 83 chr10 38101000 38101277 -107488011 + L1ME4a LINE L1 5635 5909 -212 1210 191 158 0 chr10 38101284 38101530 -107487758 + AluJo SINE Alu 8 292 -20 195 100 0 0 chr10 38101713 38101743 -107487545 + (T)n Simple_repeat Simple_repeat 1 30 0 353 315 67 17 chr10 38105002 38105180 -107484108 - MIR SINE MIR -2 260 74 306 238 20 82 chr10 38105346 38105493 -107483795 + L2 LINE L2 3163 3300 -13 231 36 0 0 chr10 38105493 38105521 -107483767 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 42882 34 30 2 chr10 38106678 38112666 -107476622 + L1PA3 LINE L1 1 6155 0 1909 156 3 7 chr10 38113578 38113866 -107475422 + AluJo SINE Alu 1 287 -25 657 286 89 19 chr10 38115324 38115524 -107473764 - MER102b DNA MER1_type -1091 337 106 470 17 17 0 chr10 38115524 38115583 -107473705 + (TG)n Simple_repeat Simple_repeat 2 61 0 657 286 89 19 chr10 38115583 38115697 -107473591 - MER102b DNA MER1_type -1322 106 1 425 38 0 0 chr10 38117274 38117327 -107471961 - MADE1 DNA Mariner 0 80 28 195 276 37 52 chr10 38117744 38117878 -107471410 + L2 LINE L2 1545 1676 -1638 22 56 0 0 chr10 38118171 38118207 -107471081 + AT_rich Low_complexity Low_complexity 1 36 0 2679 58 0 0 chr10 38118217 38118526 -107470762 + AluY SINE Alu 1 309 -2 212 333 10 29 chr10 38118778 38118880 -107470408 + L2 LINE L2 2260 2359 -955 822 200 60 0 chr10 38118997 38119147 -107470141 - MER63 DNA MER1_type -277 785 1 260 370 20 0 chr10 38119195 38119295 -107469993 + L2 LINE L2 2542 2643 -671 850 243 90 23 chr10 38121299 38121599 -107467689 - Charlie2 DNA MER1_type 0 2862 2543 2133 120 82 15 chr10 38121739 38122080 -107467208 - THE1B LTR MaLR 0 364 1 452 245 127 42 chr10 38126196 38126408 -107462880 - MIR SINE MIR 0 262 33 2041 132 0 0 chr10 38127210 38127525 -107461763 - AluSx SINE Alu 0 315 1 274 307 94 16 chr10 38128120 38128247 -107461041 + MIR SINE MIR 28 164 -98 2336 262 51 26 chr10 38128390 38129160 -107460128 - L1MC4 LINE L1 -553 7489 6701 1857 149 98 0 chr10 38129276 38129624 -107459664 - L1MB7 LINE L1 0 6184 5803 2141 115 0 0 chr10 38129838 38130116 -107459172 - AluSx SINE Alu -34 278 1 1814 184 0 7 chr10 38130751 38131055 -107458233 - AluJo SINE Alu -8 304 3 238 260 226 20 chr10 38131162 38131308 -107457980 - MIR SINE MIR -3 259 84 330 318 0 0 chr10 38131332 38131417 -107457871 + MER94 DNA DNA 49 133 -1 281 292 62 0 chr10 38131421 38131517 -107457771 - MIR3 SINE MIR -102 106 5 235 309 127 33 chr10 38132102 38132283 -107457005 + MIR SINE MIR 24 221 -41 182 323 156 11 chr10 38132766 38133029 -107456259 - L2 LINE L2 -978 2336 2036 555 229 7 46 chr10 38134095 38134248 -107455040 - MIR SINE MIR -40 222 76 198 0 0 0 chr10 38134616 38134638 -107454650 + (A)n Simple_repeat Simple_repeat 1 22 0 180 0 0 0 chr10 38137182 38137202 -107452086 + (TTCC)n Simple_repeat Simple_repeat 1 20 0 243 0 0 0 chr10 38137202 38137229 -107452059 + (T)n Simple_repeat Simple_repeat 1 27 0 22 0 0 0 chr10 38137456 38137478 -107451810 + AT_rich Low_complexity Low_complexity 1 22 0 394 286 32 8 chr10 38138817 38138943 -107450345 - MER5B DNA MER1_type -5 173 45 195 291 0 0 chr10 38138943 38138998 -107450290 - MER5B DNA MER1_type -82 96 42 188 298 0 0 chr10 38139097 38139154 -107450134 - MER5B DNA MER1_type -80 98 42 * 191 298 0 0 chr10 38139149 38139206 -107450082 - MER5B DNA MER1_type -80 98 42 * 212 281 0 0 chr10 38139201 38139258 -107450030 - MER5B DNA MER1_type -80 98 42 188 298 0 0 chr10 38139357 38139414 -107449874 - MER5B DNA MER1_type -80 98 42 * 191 298 0 0 chr10 38139409 38139466 -107449822 - MER5B DNA MER1_type -80 98 42 188 298 0 0 chr10 38139461 38139518 -107449770 - MER5B DNA MER1_type -80 98 42 * 188 298 0 0 chr10 38139617 38139674 -107449614 - MER5B DNA MER1_type -80 98 42 186 298 0 0 chr10 38139669 38139726 -107449562 - MER5B DNA MER1_type -80 98 42 * 188 298 0 0 chr10 38139877 38139934 -107449354 - MER5B DNA MER1_type -80 98 42 333 290 11 0 chr10 38139981 38140074 -107449214 - MER5B DNA MER1_type -80 98 5 1750 147 68 3 chr10 38140312 38140605 -107448683 - AluJb SINE Alu 0 312 1 446 148 37 0 chr10 38141860 38141941 -107447347 + LTR42 LTR ERVL 5 88 -407 388 343 77 21 chr10 38143194 38143480 -107445808 + LTR57-int LTR ERVL 1856 2157 -3186 304 275 141 21 chr10 38144303 38144445 -107444843 - MIR SINE MIR -71 191 33 875 261 77 19 chr10 38145383 38145708 -107443580 + L1ME4a LINE L1 5491 5834 -287 255 129 100 57 chr10 38145822 38145892 -107443396 + L1ME4a LINE L1 6048 6120 -1 461 262 163 0 chr10 38147990 38148162 -107441126 - MIR SINE MIR -14 248 49 2135 81 0 75 chr10 38148962 38149270 -107440018 + AluSc SINE Alu 1 285 -24 25 31 0 0 chr10 38149956 38149988 -107439300 + AT_rich Low_complexity Low_complexity 1 32 0 2229 101 0 29 chr10 38150121 38150427 -107438861 + AluSx SINE Alu 1 297 -15 1910 156 10 0 chr10 38151330 38151619 -107437669 + AluJb SINE Alu 1 292 -20 421 325 77 42 chr10 38153856 38154417 -107434871 + L2 LINE L2 2723 3304 -9 2112 108 14 14 chr10 38154565 38154862 -107434426 - AluSx SINE Alu -15 297 1 1724 176 68 8 chr10 38155117 38155487 -107433801 - L1MB8 LINE L1 0 6178 5787 204 40 0 0 chr10 38155491 38155516 -107433772 + (CA)n Simple_repeat Simple_repeat 2 26 0 312 27 0 0 chr10 38155516 38155540 -107433748 + (TG)n Simple_repeat Simple_repeat 1 61 0 312 27 0 0 chr10 38155540 38155577 -107433711 + (TG)n Simple_repeat Simple_repeat 2 38 0 3192 115 2 0 chr10 38155603 38156029 -107433259 - LTR3 LTR ERVK -1 431 5 387 105 0 0 chr10 38156043 38156100 -107433188 + (TATATG)n Simple_repeat Simple_repeat 4 60 0 1798 183 24 12 chr10 38156116 38156455 -107432833 - MER2 DNA MER2_type -2 343 1 8222 204 71 29 chr10 38156460 38156573 -107432715 - L1MB8 LINE L1 -406 5778 5671 2310 145 8 0 chr10 38156573 38156925 -107432363 + THE1A LTR MaLR 1 355 0 11266 94 34 1 chr10 38156925 38158454 -107430834 + THE1A-int LTR MaLR 1 1580 0 2179 128 11 40 chr10 38158454 38158829 -107430459 + THE1B LTR MaLR 1 364 0 8222 204 71 29 chr10 38158829 38160047 -107429241 - L1MB8 LINE L1 -513 5671 4506 2378 97 0 0 chr10 38160047 38160346 -107428942 + AluSc SINE Alu 1 299 -10 8222 204 71 29 chr10 38160346 38161759 -107427529 - L1MB8 LINE L1 -1678 4506 2917 804 152 41 174 chr10 38161750 38161951 -107427337 - L1MC3 LINE L1 0 7785 7640 * 1399 197 14 21 chr10 38161951 38162240 -107427048 - AluJo SINE Alu -25 287 1 804 152 41 174 chr10 38162240 38162354 -107426934 - L1MC3 LINE L1 -145 7640 7512 318 191 0 0 chr10 38162354 38162418 -107426870 - L1MD3 LINE L1 -210 7777 7512 283 281 0 0 chr10 38162418 38162482 -107426806 - L1MC3 LINE L1 -210 7575 7512 * 318 246 0 0 chr10 38162481 38162546 -107426742 - L1MC3 LINE L1 -209 7576 7512 288 218 0 0 chr10 38162555 38162610 -107426678 - L1MD3 LINE L1 -218 7777 7723 * 2546 184 25 4 chr10 38162588 38163071 -107426217 - L1MC3 LINE L1 -181 7604 7112 234 217 0 117 chr10 38163591 38163711 -107425577 + MER112 DNA MER1_type 149 254 -6 2532 207 53 17 chr10 38163713 38163940 -107425348 - MER68 LTR ERV1 0 562 345 6373 149 66 9 chr10 38163940 38165101 -107424187 + Tigger3b DNA MER2_type 3 1230 -1 2532 207 53 17 chr10 38165101 38165415 -107423873 - MER68 LTR ERV1 -217 345 1 236 327 196 6 chr10 38165605 38165773 -107423515 - Charlie8 DNA MER1_type -2209 208 9 1435 196 22 90 chr10 38165815 38166228 -107423060 - MLT1B LTR MaLR -2 388 4 191 245 0 0 chr10 38166276 38166325 -107422963 - L2 LINE L2 -671 2643 2595 24 53 0 0 chr10 38166327 38166365 -107422923 + AT_rich Low_complexity Low_complexity 1 38 0 25 65 0 0 chr10 38166435 38166481 -107422807 + AT_rich Low_complexity Low_complexity 1 46 0 2444 140 54 14 chr10 38168567 38168796 -107420492 - Tigger2 DNA MER2_type 0 2718 2500 363 89 0 0 chr10 38168796 38168852 -107420436 + (TA)n Simple_repeat Simple_repeat 2 57 0 2154 102 3 0 chr10 38168852 38169136 -107420152 - AluSg SINE Alu -25 285 1 2444 140 54 14 chr10 38169136 38169334 -107419954 - Tigger2 DNA MER2_type -217 2501 2273 400 180 0 0 chr10 38169331 38169392 -107419896 + MER8 DNA MER2_type 179 239 0 * 218 292 22 11 chr10 38170987 38171076 -107418212 + CT-rich Low_complexity Low_complexity 4 93 0 190 325 143 8 chr10 38171485 38171611 -107417677 + L2 LINE L2 2267 2409 -905 3936 127 41 73 chr10 38172345 38173130 -107416158 + L1MB3 LINE L1 5423 6182 -1 333 111 0 0 chr10 38173141 38173195 -107416093 + L1MD2 LINE L1 6305 6358 -1 319 206 76 11 chr10 38175630 38175722 -107413566 - MIR SINE MIR -74 188 91 393 189 110 0 chr10 38176065 38176192 -107413096 - MIR SINE MIR -50 212 72 1141 245 174 25 chr10 38177321 38177387 -107411901 - Charlie2 DNA MER1_type -4 2858 2803 1938 98 4 4 chr10 38177387 38177643 -107411645 - AluSq SINE Alu -14 299 44 1141 245 174 25 chr10 38177643 38178015 -107411273 - Charlie2 DNA MER1_type -59 2803 2488 2153 108 3 17 chr10 38178015 38178310 -107410978 + AluSx SINE Alu 1 291 -21 1141 245 174 25 chr10 38178310 38178705 -107410583 - Charlie2 DNA MER1_type -374 2488 1857 709 314 48 9 chr10 38178697 38179012 -107410276 - Charlie2 DNA MER1_type -2452 330 4 * 2372 111 26 31 chr10 38179050 38179438 -107409850 + MLT1B LTR MaLR 5 390 0 4318 200 65 70 chr10 38179438 38180813 -107408475 + MLT1B-int LTR MaLR 1 1369 -2 1569 199 75 11 chr10 38180820 38181181 -107408107 + MLT1B LTR MaLR 7 390 0 306 266 217 28 chr10 38181882 38182025 -107407263 - L1ME4a LINE L1 -90 6031 5862 2515 213 17 2 chr10 38182833 38183359 -107405929 - L1MB3 LINE L1 -1 6182 5649 1213 120 0 11 chr10 38184241 38184416 -107404872 - AluSq SINE Alu -7 306 134 2286 112 0 10 chr10 38184416 38184720 -107404568 - AluSq SINE Alu -12 301 1 763 206 32 37 chr10 38185800 38185989 -107403299 + MER5A DNA MER1_type 2 189 0 2149 129 10 3 chr10 38186880 38187183 -107402105 - AluSx SINE Alu -7 305 1 2080 109 3 36 chr10 38187241 38187544 -107401744 - AluSg SINE Alu -9 301 9 2257 114 10 0 chr10 38192821 38193120 -107396168 - AluSq SINE Alu -11 302 1 21 36 0 0 chr10 38193169 38193197 -107396091 + AT_rich Low_complexity Low_complexity 1 28 0 35 0 0 0 chr10 38193610 38193645 -107395643 + AT_rich Low_complexity Low_complexity 1 35 0 1319 184 28 31 chr10 38193645 38193791 -107395497 - AluJo SINE Alu -26 286 140 2187 128 0 3 chr10 38193791 38194095 -107395193 - AluSx SINE Alu -9 303 1 1319 184 28 31 chr10 38194095 38194203 -107395085 - AluJo SINE Alu -172 140 33 416 236 45 36 chr10 38194882 38194992 -107394296 + MIR SINE MIR 39 149 -59 409 277 88 20 chr10 38196816 38196964 -107392324 + L1M4 LINE L1 4243 4400 -1746 985 151 0 7 chr10 38196980 38197126 -107392162 + FRAM SINE Alu 14 158 -18 635 241 156 31 chr10 38197167 38197352 -107391936 - MIR SINE MIR -10 252 33 804 164 25 0 chr10 38197352 38197474 -107391814 - FLAM_C SINE Alu -8 125 1 635 241 156 31 chr10 38197474 38197512 -107391776 - MIR SINE MIR -229 33 1 1593 210 112 9 chr10 38197561 38197980 -107391308 + MLT1C LTR MaLR 6 467 0 2214 113 3 3 chr10 38198008 38198300 -107390988 + AluSx SINE Alu 1 292 -20 216 308 56 47 chr10 38198427 38198534 -107390754 + L2 LINE L2 2896 3003 -310 276 194 65 97 chr10 38199161 38199254 -107390034 - MIR SINE MIR -88 174 85 205 265 48 12 chr10 38199324 38199407 -107389881 + L2 LINE L2 3183 3268 -45 1621 171 62 20 chr10 38199676 38200322 -107388966 + L1MA7 LINE L1 5502 6291 0 272 247 99 62 chr10 38200600 38200762 -107388526 - MIR SINE MIR -10 252 85 1624 98 0 0 chr10 38201804 38202018 -107387270 + AluSg/x SINE Alu 93 306 -6 411 255 90 35 chr10 38202075 38202220 -107387068 + L3 LINE CR1 1259 1411 -166 339 302 151 35 chr10 38202455 38202627 -107386661 - MIR SINE MIR -65 197 6 2623 77 0 0 chr10 38202680 38202991 -107386297 + AluY SINE Alu 1 311 0 1780 121 28 0 chr10 38203121 38203370 -107385918 + AluSx SINE Alu 49 304 -8 1611 153 50 37 chr10 38203662 38203962 -107385326 - AluJo SINE Alu -8 304 1 183 184 0 0 chr10 38206992 38207030 -107382258 + CT-rich Low_complexity Low_complexity 2 39 0 333 0 0 0 chr10 38207273 38207310 -107381978 + (TG)n Simple_repeat Simple_repeat 1 37 0 1573 184 26 49 chr10 38207402 38207793 -107381495 - MLT1B LTR MaLR -8 382 1 554 39 13 0 chr10 38207887 38207964 -107381324 + (TC)n Simple_repeat Simple_repeat 1 78 0 2409 99 0 6 chr10 38208007 38208321 -107380967 - AluSx SINE Alu 0 312 1 1821 130 4 19 chr10 38208716 38208985 -107380303 - AluJo SINE Alu -16 296 32 2011 154 3 25 chr10 38209736 38210055 -107379233 - AluJb SINE Alu 0 312 1 1954 150 0 0 chr10 38210470 38210750 -107378538 + AluJo SINE Alu 1 280 -32 324 0 0 0 chr10 38210752 38210788 -107378500 + (TAA)n Simple_repeat Simple_repeat 2 37 0 245 259 0 54 chr10 38211085 38211102 -107378186 + T-rich Low_complexity Low_complexity 5 21 -89 2283 152 8 19 chr10 38211102 38211471 -107377817 - MLT1A1 LTR MaLR 0 365 1 245 259 0 54 chr10 38211471 38211565 -107377723 + T-rich Low_complexity Low_complexity 21 110 0 1498 315 64 24 chr10 38211789 38212709 -107376579 + L1MEc LINE L1 35 991 -5405 684 217 19 0 chr10 38212710 38212871 -107376417 + L1MEc LINE L1 2394 2557 -3658 357 341 24 0 chr10 38213925 38214048 -107375240 + MIR SINE MIR 13 138 -124 207 256 183 24 chr10 38214508 38214590 -107374698 + L2 LINE L2 3169 3263 -9 1641 139 20 51 chr10 38215209 38215504 -107373784 + AluJo SINE Alu 1 286 -26 183 42 0 0 chr10 38215504 38215528 -107373760 + (CAAAC)n Simple_repeat Simple_repeat 2 25 0 1073 108 0 29 chr10 38215861 38216131 -107373157 + (TTCC)n Simple_repeat Simple_repeat 4 438 0 2392 105 0 0 chr10 38216527 38216831 -107372457 - AluSx SINE Alu -8 304 1 1496 132 8 0 chr10 38216886 38217121 -107372167 + L1MA6 LINE L1 6059 6295 -5 2594 70 0 0 chr10 38217732 38218034 -107371254 + AluSc SINE Alu 1 302 -7 341 281 10 10 chr10 38218081 38218177 -107371111 - MIR SINE MIR -43 219 124 207 293 225 0 chr10 38218478 38218669 -107370619 - L2 LINE L2 -357 2957 2724 673 164 0 0 chr10 38218758 38218862 -107370426 + AluJb SINE Alu 2 105 -207 237 154 0 0 chr10 38218862 38218901 -107370387 + MADE1 DNA Mariner 42 80 0 617 259 186 22 chr10 38219371 38219645 -107369643 + L2 LINE L2 2982 3300 -13 2132 139 0 16 chr10 38219909 38220225 -107369063 - AluSx SINE Alu -1 311 1 324 0 0 0 chr10 38221399 38221435 -107367853 + (CA)n Simple_repeat Simple_repeat 2 37 0 396 351 146 0 chr10 38221609 38221814 -107367474 - MIR SINE MIR -12 250 16 2215 231 36 91 chr10 38222114 38222428 -107366860 - MER82 DNA MER2_type 0 653 396 1818 143 0 21 chr10 38222428 38222715 -107366573 + AluJo SINE Alu 12 292 -20 2215 231 36 91 chr10 38222715 38223091 -107366197 - MER82 DNA MER2_type -257 396 1 379 287 133 11 chr10 38223095 38223283 -107366005 - MIR SINE MIR -9 253 43 1621 181 17 10 chr10 38223313 38223605 -107365683 - AluJo SINE Alu -14 298 5 2289 100 0 10 chr10 38223862 38224162 -107365126 - AluSx SINE Alu -15 297 1 257 329 0 26 chr10 38224471 38224547 -107364741 - MIR SINE MIR -113 149 76 183 326 166 21 chr10 38225246 38225433 -107363855 - MIR SINE MIR -15 247 34 2435 87 0 0 chr10 38226585 38226885 -107362403 - AluY SINE Alu -11 300 1 719 194 0 8 chr10 38227847 38227998 -107361290 + FLAM_A SINE Alu 3 133 0 1892 125 7 49 chr10 38229194 38229499 -107359789 + AluJo SINE Alu 14 305 -7 2443 93 30 35 chr10 38230006 38230074 -107359214 - THE1B LTR MaLR 0 364 297 2423 87 0 0 chr10 38230074 38230372 -107358916 - AluY SINE Alu -12 299 2 2443 93 30 35 chr10 38230372 38230669 -107358619 - THE1B LTR MaLR -67 297 1 2228 127 3 0 chr10 38231755 38232055 -107357233 + AluSx SINE Alu 1 301 -11 409 264 151 6 chr10 38232276 38232435 -107356853 - MLT1J2 LTR MaLR -6 444 263 408 245 168 7 chr10 38232480 38232623 -107356665 - MLT1J1 LTR MaLR -277 169 4 1363 173 157 0 chr10 38233907 38234001 -107355287 + AluJo SINE Alu 2 80 -222 215 56 56 0 chr10 38234001 38234037 -107355251 + A-rich Low_complexity Low_complexity 4 41 0 1363 173 157 0 chr10 38234037 38234197 -107355091 + AluJo SINE Alu 80 296 -6 238 315 7 56 chr10 38234284 38234427 -107354861 + MIR SINE MIR 106 241 -21 1856 126 20 7 chr10 38235322 38235615 -107353673 + AluSx SINE Alu 1 297 -15 1677 149 0 51 chr10 38235929 38236245 -107353043 + AluJo SINE Alu 1 300 -12 1387 140 93 36 chr10 38236260 38236538 -107352750 + AluJo SINE Alu 1 294 -18 224 358 41 41 chr10 38237250 38237373 -107351915 - MIR SINE MIR -118 144 22 1690 137 48 34 chr10 38237498 38237791 -107351497 - AluJo SINE Alu -15 297 1 23 0 0 0 chr10 38238279 38238302 -107350986 + AT_rich Low_complexity Low_complexity 1 23 0 1520 163 14 28 chr10 38238305 38238588 -107350700 - AluJo SINE Alu -33 279 1 767 211 0 0 chr10 38238710 38238843 -107350445 + FLAM_A SINE Alu 1 133 0 2267 63 0 30 chr10 38238854 38239188 -107350100 + AluY SINE Alu 1 311 0 875 94 8 0 chr10 38239812 38239929 -107349359 - MSTB1 LTR MaLR 0 432 315 2446 110 31 3 chr10 38239930 38240284 -107349004 + THE1B LTR MaLR 1 364 0 1778 139 3 63 chr10 38240345 38240677 -107348611 - AluJo SINE Alu 0 312 1 254 328 39 0 chr10 38240680 38240808 -107348480 - L2 LINE L2 -957 2357 2225 2052 130 0 9 chr10 38241114 38241429 -107347859 - AluSx SINE Alu 0 312 1 1000 122 0 19 chr10 38241875 38242074 -107347214 - AluSg/x SINE Alu 0 325 130 391 270 40 52 chr10 38242446 38242620 -107346668 - MIR SINE MIR -8 254 83 1541 194 3 28 chr10 38242687 38243006 -107346282 - AluJb SINE Alu -1 311 1 340 286 298 17 chr10 38243409 38243587 -107345701 - MIR SINE MIR -14 248 21 2118 109 10 6 chr10 38243588 38243899 -107345389 + AluSx SINE Alu 1 312 0 2417 165 52 0 chr10 38244248 38244653 -107344635 - MSTB LTR MaLR 0 426 1 2158 117 7 0 chr10 38244809 38245117 -107344171 + AluSq SINE Alu 1 310 -3 5684 146 5 0 chr10 38245826 38246709 -107342579 - L1PA15 LINE L1 0 6165 5279 1945 112 54 17 chr10 38246726 38247020 -107342268 - AluSx SINE Alu -7 305 1 1899 141 0 10 chr10 38248105 38248404 -107340884 - AluJo SINE Alu -16 296 1 198 245 0 19 chr10 38248605 38248658 -107340630 + L2 LINE L2 3262 3313 0 1388 173 30 60 chr10 38248820 38249120 -107340168 - AluJb SINE Alu -21 291 1 220 298 0 64 chr10 38249163 38249257 -107340031 - MIR SINE MIR -71 191 104 617 294 40 78 chr10 38249409 38249834 -107339454 + MLT1I LTR MaLR 1 409 0 216 184 0 0 chr10 38249862 38249911 -107339377 + (TGGA)n Simple_repeat Simple_repeat 4 52 0 3574 126 20 32 chr10 38249925 38250490 -107338798 + L1MB2 LINE L1 5574 6133 -38 2257 73 21 0 chr10 38250490 38250776 -107338512 - AluSq SINE Alu -21 292 1 3574 126 20 32 chr10 38250776 38250812 -107338476 + L1MB2 LINE L1 6133 6168 -3 1911 139 3 13 chr10 38250874 38251175 -107338113 - AluSx SINE Alu -14 298 1 779 205 110 50 chr10 38251177 38251430 -107337858 - MIR SINE MIR -1 261 13 189 0 0 0 chr10 38252079 38252100 -107337188 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 2942 158 6 6 chr10 38252100 38252580 -107336708 - L1PA16 LINE L1 -23 6143 5664 304 268 0 0 chr10 38252876 38252973 -107336315 + (TA)n Simple_repeat Simple_repeat 1 97 0 612 260 5 78 chr10 38253009 38253201 -107336087 - MER5B DNA MER1_type 0 178 1 1484 174 66 41 chr10 38253793 38254156 -107335132 - THE1C LTR MaLR -3 372 1 1583 183 35 0 chr10 38254434 38254723 -107334565 - AluJo SINE Alu -13 299 1 238 255 98 20 chr10 38254815 38254917 -107334371 + MIR3 SINE MIR 50 159 -49 2007 103 11 0 chr10 38255191 38255472 -107333816 - AluSx SINE Alu -19 293 10 243 200 61 130 chr10 38256018 38256133 -107333155 - MER69A DNA AcHobo -15 162 56 23 54 0 0 chr10 38259280 38259317 -107329971 + AT_rich Low_complexity Low_complexity 1 37 0 317 167 9 46 chr10 38259981 38260089 -107329199 + C-rich Low_complexity Low_complexity 6 109 0 195 14 100 43 chr10 38260847 38260917 -107328371 + (CCGCG)n Simple_repeat Simple_repeat 4 77 0 23 0 0 0 chr10 38260921 38260944 -107328344 + GC_rich Low_complexity Low_complexity 1 23 0 238 157 14 14 chr10 38261323 38261393 -107327895 + (CCG)n Simple_repeat Simple_repeat 3 72 0 39 88 0 0 chr10 38261396 38261498 -107327790 + GC_rich Low_complexity Low_complexity 1 102 0 21 0 0 0 chr10 38262352 38262373 -107326915 + GC_rich Low_complexity Low_complexity 1 21 0 258 311 22 0 chr10 38263518 38263608 -107325680 + MIR SINE MIR 117 208 -54 27 49 0 0 chr10 38263947 38263988 -107325300 + GC_rich Low_complexity Low_complexity 1 41 0 337 247 17 17 chr10 38264173 38264347 -107324941 + CT-rich Low_complexity Low_complexity 2 175 0 1806 170 0 0 chr10 38266180 38266474 -107322814 + AluJo SINE Alu 1 294 -18 703 171 23 16 chr10 38266546 38266675 -107322613 + AluJo SINE Alu 1 130 -172 978 157 15 46 chr10 38266698 38266722 -107322566 + AluJo SINE Alu 118 141 -171 1884 147 0 10 chr10 38266722 38267022 -107322266 + AluSx SINE Alu 1 297 -15 978 157 15 46 chr10 38267022 38267194 -107322094 + AluJo SINE Alu 141 308 -4 230 247 118 12 chr10 38267761 38267846 -107321442 - MLT1L LTR MaLR -46 569 476 266 186 38 49 chr10 38267971 38268084 -107321204 - MLT1J2 LTR MaLR -293 218 72 258 196 20 0 chr10 38268045 38268096 -107321192 - LTR67 LTR ERVL -404 153 102 * 1930 110 0 36 chr10 38268473 38268782 -107320506 + AluSx SINE Alu 1 298 -14 2022 129 0 10 chr10 38268875 38269185 -107320103 - AluSx SINE Alu -5 307 1 21 0 0 0 chr10 38269208 38269229 -107320059 + AT_rich Low_complexity Low_complexity 1 21 0 209 293 12 73 chr10 38269844 38269870 -107319418 - L2 LINE L2 -10 3262 3236 1037 246 93 60 chr10 38269870 38270407 -107318881 - MLT1H1 LTR MaLR 0 555 1 209 293 12 73 chr10 38270407 38270462 -107318826 - L2 LINE L2 -36 3236 3186 602 283 133 30 chr10 38270853 38271185 -107318103 - MLT1L LTR MaLR -59 556 191 375 200 12 12 chr10 38271210 38271290 -107317998 - MLT1L LTR MaLR -535 80 1 2012 121 3 0 chr10 38272273 38272563 -107316725 - AluSx SINE Alu -21 291 1 759 100 0 0 chr10 38272747 38272857 -107316431 + (TTCC)n Simple_repeat Simple_repeat 3 112 0 1539 153 7 64 chr10 38272873 38273168 -107316120 - AluJo SINE Alu -34 278 1 188 65 0 32 chr10 38273825 38273856 -107315432 + (TTTTC)n Simple_repeat Simple_repeat 2 31 0 547 274 21 42 chr10 38273865 38274055 -107315233 - MLT1L LTR MaLR -9 606 421 529 257 57 94 chr10 38274109 38274329 -107314959 - MLT1L LTR MaLR -360 255 45 1592 195 0 7 chr10 38274329 38274657 -107314631 + AluJo SINE Alu 1 312 0 529 257 57 94 chr10 38274657 38274701 -107314587 - MLT1L LTR MaLR -570 45 1 2228 98 3 0 chr10 38274789 38275095 -107314193 - AluSp SINE Alu -6 307 1 281 268 10 22 chr10 38275322 38275463 -107313825 - L1ME LINE L1 -355 5878 5736 313 61 0 20 chr10 38275479 38275523 -107313765 - AluSx SINE Alu 0 300 257 1523 98 0 5 chr10 38275523 38275726 -107313562 - AluSx SINE Alu -110 202 1 228 324 89 27 chr10 38275775 38276000 -107313288 - L1ME LINE L1 -570 5620 5382 1033 301 97 40 chr10 38276005 38276084 -107313204 - L1ME LINE L1 -840 5375 5302 1960 127 7 10 chr10 38276084 38276413 -107312875 + AluSx SINE Alu 1 312 0 1033 301 97 40 chr10 38276413 38276975 -107312313 - L1ME LINE L1 -913 5302 4698 385 226 26 35 chr10 38277007 38277122 -107312166 - L1ME LINE L1 -2847 3368 3255 269 280 137 35 chr10 38277122 38277662 -107311626 - L1ME LINE L1 -3217 2998 2338 829 200 0 6 chr10 38277663 38277828 -107311460 - FRAM SINE Alu 0 40 1 2150 234 100 23 chr10 38277918 38278640 -107310648 - HsTC2 DNA Tc2 -2 1896 4 303 211 19 87 chr10 38278737 38278841 -107310447 - L1MC4 LINE L1 -388 7654 7558 302 226 6 0 chr10 38279136 38279209 -107310079 - L1ME LINE L1 -862 1714 1598 225 292 123 0 chr10 38279468 38279598 -107309690 - L1ME LINE L1 -5941 264 119 2182 110 0 0 chr10 38279695 38279995 -107309293 - AluSx SINE Alu -12 300 1 259 242 32 0 chr10 38280471 38280533 -107308755 + L1ME4a LINE L1 5504 5567 -599 691 268 129 44 chr10 38280548 38280820 -107308468 - MLT1H LTR MaLR -3 546 252 236 30 30 0 chr10 38280844 38280877 -107308411 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 360 285 72 117 chr10 38280927 38281001 -107308287 + L1ME4a LINE L1 5684 5760 -361 1482 148 86 143 chr10 38281001 38281455 -107307833 + MSTA LTR MaLR 1 428 0 360 285 72 117 chr10 38281455 38281826 -107307462 + L1ME4a LINE L1 5760 6109 -12 826 150 0 0 chr10 38282763 38283115 -107306173 + AluJo SINE Alu 2 353 0 243 0 0 0 chr10 38283255 38283282 -107306006 + (CA)n Simple_repeat Simple_repeat 1 27 0 645 144 0 0 chr10 38285885 38285975 -107303313 - AluJb SINE Alu -20 292 203 27 112 0 0 chr10 38286031 38286156 -107303132 + AT_rich Low_complexity Low_complexity 1 125 0 733 251 76 63 chr10 38286178 38286560 -107302728 - L1ME4a LINE L1 -84 6037 5651 245 325 61 0 chr10 38286882 38286996 -107302292 + MIR SINE MIR 72 192 -70 211 292 7 56 chr10 38287310 38287454 -107301834 + L2 LINE L2 2919 3055 -258 537 220 15 15 chr10 38287501 38287633 -107301655 + MIR SINE MIR 120 251 -11 1137 123 0 0 chr10 38287678 38287755 -107301533 + (CCA)n Simple_repeat Simple_repeat 1 256 0 1137 123 0 0 chr10 38287755 38287934 -107301354 + (CCA)n Simple_repeat Simple_repeat 1 179 0 980 159 9 8 chr10 38287962 38288316 -107300972 + (CCA)n Simple_repeat Simple_repeat 1 354 0 228 261 0 0 chr10 38288349 38288395 -107300893 + L2 LINE L2 3261 3306 -7 372 357 50 76 chr10 38288573 38289032 -107300256 + L2 LINE L2 2824 3270 -2 213 301 0 0 chr10 38289455 38289548 -107299740 + (TG)n Simple_repeat Simple_repeat 1 93 0 506 268 0 6 chr10 38289559 38289738 -107299550 + (TG)n Simple_repeat Simple_repeat 2 179 0 439 279 33 33 chr10 38289900 38290083 -107299205 + LTR16C LTR ERVL 303 485 -6 737 125 45 27 chr10 38290525 38290637 -107298651 - FLAM_A SINE Alu -18 124 11 271 250 96 115 chr10 38290729 38291085 -107298203 - L2 LINE L2 -38 3234 2886 1855 151 0 39 chr10 38291731 38291922 -107297366 - AluJo SINE Alu -13 299 123 1898 113 0 0 chr10 38291922 38292170 -107297118 + AluSc SINE Alu 41 288 -21 1855 151 0 39 chr10 38292170 38292289 -107296999 - AluJo SINE Alu -189 123 1 2262 103 3 3 chr10 38292979 38293281 -107296007 + AluSq SINE Alu 1 302 -11 1603 189 21 3 chr10 38293553 38293839 -107295449 + AluJo SINE Alu 1 291 -21 281 275 124 67 chr10 38294105 38294298 -107294990 + MIR SINE MIR 33 236 -26 5383 197 49 21 chr10 38294845 38295931 -107293357 - L1MCa LINE L1 -4970 1456 331 1509 173 39 33 chr10 38295931 38296237 -107293051 - AluJo SINE Alu -4 308 1 5383 197 49 21 chr10 38296237 38296375 -107292913 - L1MCa LINE L1 -6095 331 198 2134 129 0 10 chr10 38296526 38296836 -107292452 - AluSx SINE Alu -5 307 1 21 0 0 0 chr10 38296859 38296880 -107292408 + AT_rich Low_complexity Low_complexity 1 21 0 209 293 12 73 chr10 38297495 38297521 -107291767 - L2 LINE L2 -10 3262 3236 1152 238 99 65 chr10 38297521 38298058 -107291230 - MLT1H1 LTR MaLR 0 555 1 209 293 12 73 chr10 38298058 38298113 -107291175 - L2 LINE L2 -36 3236 3186 585 288 138 22 chr10 38298516 38298836 -107290452 - MLT1L LTR MaLR -68 547 191 361 200 12 12 chr10 38298861 38298941 -107290347 - MLT1L LTR MaLR -535 80 1 2122 121 3 0 chr10 38299920 38300210 -107289078 - AluSx SINE Alu -21 291 1 831 93 0 0 chr10 38300394 38300512 -107288776 + (TTCC)n Simple_repeat Simple_repeat 3 120 0 1638 149 7 64 chr10 38300528 38300823 -107288465 - AluJo SINE Alu -34 278 1 188 65 0 32 chr10 38301480 38301511 -107287777 + (TTTTC)n Simple_repeat Simple_repeat 2 31 0 553 281 65 35 chr10 38301520 38301751 -107287537 - MLT1L LTR MaLR -9 606 369 563 245 53 91 chr10 38301764 38301984 -107287304 - MLT1L LTR MaLR -360 255 45 1712 192 0 7 chr10 38301984 38302312 -107286976 + AluJo SINE Alu 1 312 0 563 245 53 91 chr10 38302312 38302356 -107286932 - MLT1L LTR MaLR -570 45 1 2334 98 3 0 chr10 38302444 38302750 -107286538 - AluSp SINE Alu -6 307 1 289 268 10 22 chr10 38302977 38303118 -107286170 - L1ME LINE L1 -355 5809 5667 308 82 0 20 chr10 38303134 38303178 -107286110 - AluSx SINE Alu 0 302 259 1600 98 0 5 chr10 38303178 38303381 -107285907 - AluSx SINE Alu -110 202 1 260 320 95 31 chr10 38303430 38303652 -107285636 - L1ME LINE L1 -570 5551 5316 2237 99 3 3 chr10 38303738 38304040 -107285248 + AluSq SINE Alu 1 302 -11 1579 192 21 3 chr10 38304312 38304598 -107284690 + AluJo SINE Alu 1 291 -21 281 275 124 67 chr10 38304864 38305057 -107284231 + MIR SINE MIR 33 236 -26 6099 201 46 19 chr10 38305604 38306690 -107282598 - L1MCa LINE L1 -4970 1456 322 1509 173 39 33 chr10 38306690 38306996 -107282292 - AluJo SINE Alu -4 308 1 6099 201 46 19 chr10 38306996 38307309 -107281979 - L1MCa LINE L1 -6104 322 19 2406 91 0 0 chr10 38308037 38308333 -107280955 + AluSx SINE Alu 1 296 -16 476 272 86 39 chr10 38308643 38308900 -107280388 - L1ME LINE L1 -312 5809 5541 22 94 0 0 chr10 38308961 38309025 -107280263 + AT_rich Low_complexity Low_complexity 1 64 0 9817 25 0 0 chr10 38309207 38310338 -107278950 - L1PA3 LINE L1 -920 5226 4096 7982 29 4 14 chr10 38310338 38310610 -107278678 + L1PA3 LINE L1 5214 5487 -668 2827 16 0 0 chr10 38310610 38310918 -107278370 + AluYb8 SINE Alu 1 308 -10 7982 29 4 14 chr10 38310918 38311595 -107277693 + L1PA3 LINE L1 5487 6154 -1 1598 209 51 0 chr10 38311981 38312297 -107276991 - MER2 DNA MER2_type 0 345 14 2647 139 65 5 chr10 38313991 38314408 -107274880 - L1PA16 LINE L1 -1 6165 5724 265 235 61 31 chr10 38314507 38314605 -107274683 + L1MC4 LINE L1 6615 6715 -1327 381 300 0 13 chr10 38314894 38315044 -107274244 + CT-rich Low_complexity Low_complexity 2 149 0 21 57 0 0 chr10 38315790 38315825 -107273463 + AT_rich Low_complexity Low_complexity 1 35 0 2033 129 0 0 chr10 38317323 38317642 -107271646 - AluSx SINE Alu 0 331 13 339 318 53 8 chr10 38317753 38317885 -107271403 + MIR3 SINE MIR 64 201 -7 1638 189 13 10 chr10 38318365 38318672 -107270616 + AluJb SINE Alu 1 308 -4 438 247 41 53 chr10 38319198 38319368 -107269920 - Charlie8 DNA MER1_type -2152 265 98 1618 175 0 18 chr10 38319368 38319679 -107269609 - AluJo SINE Alu 0 314 9 188 222 167 0 chr10 38319940 38319994 -107269294 - MIR SINE MIR -140 122 60 2175 115 3 13 chr10 38320149 38320284 -107269004 + AluSx SINE Alu 1 136 -176 2215 123 0 0 chr10 38320284 38320594 -107268694 + AluSq SINE Alu 1 310 -3 2175 115 3 13 chr10 38320594 38320772 -107268516 + AluSx SINE Alu 136 311 -1 235 263 35 0 chr10 38321216 38321273 -107268015 + MIR SINE MIR 194 252 -10 1889 158 0 7 chr10 38324033 38324324 -107264964 + AluJb SINE Alu 1 289 -23 1928 151 0 0 chr10 38324922 38325272 -107264016 + AluSx SINE Alu 5 354 0 346 356 52 0 chr10 38326231 38326366 -107262922 + MIR3 SINE MIR 1 142 -66 187 289 0 0 chr10 38326372 38326417 -107262871 - L2 LINE L2 0 3313 3269 2509 75 0 0 chr10 38326548 38326853 -107262435 - AluY SINE Alu -6 305 1 2134 130 3 0 chr10 38326940 38327240 -107262048 - AluSx SINE Alu -11 301 1 198 71 0 0 chr10 38328068 38328096 -107261192 + (TG)n Simple_repeat Simple_repeat 1 28 0 2061 120 0 0 chr10 38329399 38329675 -107259613 - AluSx SINE Alu -12 300 25 2027 120 7 0 chr10 38330004 38330295 -107258993 - AluSx SINE Alu -19 293 1 4617 107 6 3 chr10 38331648 38332285 -107257003 + LTR9B LTR ERV1 6 644 0 267 228 121 53 chr10 38332715 38332865 -107256423 - MIR SINE MIR -71 191 24 481 370 15 0 chr10 38333034 38333237 -107256051 - MIR SINE MIR -28 234 29 1811 161 50 56 chr10 38333328 38333504 -107255784 - L1PA16 LINE L1 -16 6150 5975 1762 168 35 0 chr10 38333504 38333789 -107255499 - AluJo SINE Alu -17 295 1 1811 161 50 56 chr10 38333789 38333972 -107255316 - L1PA16 LINE L1 -191 5975 5793 1452 150 19 0 chr10 38334269 38334529 -107254759 - L1MA4 LINE L1 0 6300 6036 379 283 9 6 chr10 38335316 38335669 -107253619 + (CA)n Simple_repeat Simple_repeat 1 354 0 497 201 13 13 chr10 38336343 38336502 -107252786 + (TG)n Simple_repeat Simple_repeat 2 160 0 520 276 45 0 chr10 38337056 38337212 -107252076 - MIR SINE MIR -19 243 81 3158 123 2 0 chr10 38337851 38338297 -107250991 - L1PA13 LINE L1 -2 6161 5715 423 309 66 51 chr10 38338303 38338905 -107250383 - L1MDa LINE L1 -842 1648 1012 1922 132 0 21 chr10 38339803 38340130 -107249158 + AluSx SINE Alu 1 321 0 186 359 145 19 chr10 38340221 38340483 -107248805 + L2 LINE L2 2084 2378 -936 1586 93 6 0 chr10 38340674 38341029 -107248259 - L1PB2 LINE L1 -2 6149 5717 729 169 121 61 chr10 38341030 38341261 -107248027 - ORSL DNA AcHobo -1 274 30 2395 111 44 39 chr10 38341407 38341769 -107247519 - THE1B LTR MaLR 0 364 1 293 246 0 0 chr10 38341785 38341846 -107247442 - Tigger5 DNA MER2_type 0 2323 2263 280 155 17 69 chr10 38341866 38341924 -107247364 - Tigger5 DNA MER2_type -2268 55 1 240 226 16 0 chr10 38343867 38343929 -107245359 + CT-rich Low_complexity Low_complexity 2 64 0 189 74 0 0 chr10 38343998 38344025 -107245263 + (CAAAA)n Simple_repeat Simple_repeat 4 30 0 1572 152 14 45 chr10 38344251 38344563 -107244725 - AluJb SINE Alu 0 312 11 1000 251 91 52 chr10 38345394 38345832 -107243456 + MLT1J LTR MaLR 1 455 -56 4167 186 35 8 chr10 38345945 38347029 -107242259 + L1MD2 LINE L1 4883 5992 -250 252 62 0 0 chr10 38347034 38347066 -107242222 - MLT2D LTR ERVL 0 414 383 351 78 0 0 chr10 38347069 38347120 -107242168 + (CA)n Simple_repeat Simple_repeat 2 52 0 362 166 11 57 chr10 38347145 38347295 -107241993 + GA-rich Low_complexity Low_complexity 2 144 -24 297 51 0 0 chr10 38347295 38347334 -107241954 + (CA)n Simple_repeat Simple_repeat 2 40 0 362 166 11 57 chr10 38347334 38347358 -107241930 + GA-rich Low_complexity Low_complexity 144 168 0 268 191 0 0 chr10 38347394 38347436 -107241852 - MLT2B1 LTR ERVL -118 402 361 2417 68 3 0 chr10 38347455 38347750 -107241538 + AluY SINE Alu 1 296 -15 1885 124 11 11 chr10 38347851 38348134 -107241154 - AluSx SINE Alu -29 283 1 1544 204 35 9 chr10 38348151 38348470 -107240818 - MLT2B1 LTR ERVL -193 327 1 261 50 100 0 chr10 38348486 38348526 -107240762 + L1MC/D LINE L1 5403 5446 -724 1224 222 29 52 chr10 38348537 38348816 -107240472 + L1MD2 LINE L1 6022 6293 -66 2204 121 3 3 chr10 38348816 38349123 -107240165 - AluSq SINE Alu -6 307 1 1224 222 29 52 chr10 38349123 38349186 -107240102 + L1MD2 LINE L1 6293 6356 -3 2471 99 11 62 chr10 38349544 38349918 -107239370 - THE1A LTR MaLR 0 355 1 926 269 118 26 chr10 38350588 38351005 -107238283 + L2 LINE L2 1776 2230 -1084 381 179 51 0 chr10 38351118 38351196 -107238092 - MER20 DNA MER1_type -3 216 135 317 197 28 22 chr10 38351236 38351414 -107237874 + (ATATG)n Simple_repeat Simple_repeat 2 180 0 243 0 0 0 chr10 38351468 38351495 -107237793 + (ATAGG)n Simple_repeat Simple_repeat 4 30 0 842 172 21 0 chr10 38351495 38351640 -107237648 - MER20 DNA MER1_type -71 148 1 468 77 0 0 chr10 38353144 38353209 -107236079 + (TTCC)n Simple_repeat Simple_repeat 1 65 0 2071 125 20 0 chr10 38353209 38353506 -107235782 - AluSx SINE Alu -9 303 1 857 236 16 0 chr10 38353544 38353735 -107235553 - L1PA16 LINE L1 -16 6150 5957 820 177 0 7 chr10 38353762 38353903 -107235385 - AluJb SINE Alu 0 312 173 324 329 40 27 chr10 38354244 38354393 -107234895 + MIR3 SINE MIR 48 198 -10 1915 156 0 13 chr10 38355717 38356019 -107233269 + AluJb SINE Alu 1 298 -14 2060 127 6 19 chr10 38356121 38356435 -107232853 + AluSx SINE Alu 1 310 -2 1868 174 0 7 chr10 38356683 38356987 -107232301 + AluJo SINE Alu 1 302 -10 408 308 55 16 chr10 38357014 38357196 -107232092 - MLT1J2 LTR MaLR -21 429 241 248 272 88 35 chr10 38357350 38357464 -107231824 + MLT1L LTR MaLR 225 344 -271 1118 149 64 0 chr10 38357464 38357652 -107231636 + MSTA LTR MaLR 211 410 -18 185 194 0 0 chr10 38358844 38358880 -107230408 - L2 LINE L2 0 3313 3278 2249 110 3 0 chr10 38359038 38359347 -107229941 + AluSx SINE Alu 1 310 -2 285 358 68 38 chr10 38359359 38359747 -107229541 - L2 LINE L2 -226 3046 2635 555 285 18 24 chr10 38359764 38359929 -107229359 + MER20 DNA MER1_type 56 219 0 233 356 144 17 chr10 38360265 38360383 -107228905 - MIR3 SINE MIR -46 162 30 22 0 0 0 chr10 38360477 38360499 -107228789 + AT_rich Low_complexity Low_complexity 1 22 0 274 75 75 0 chr10 38360519 38360586 -107228702 + (TA)n Simple_repeat Simple_repeat 1 72 0 21 71 0 0 chr10 38360674 38360716 -107228572 + AT_rich Low_complexity Low_complexity 1 42 0 264 159 68 6 chr10 38360727 38360890 -107228398 + (TA)n Simple_repeat Simple_repeat 1 173 0 31 0 0 0 chr10 38360890 38360921 -107228367 + AT_rich Low_complexity Low_complexity 1 31 0 2419 62 0 7 chr10 38360942 38361247 -107228041 + AluY SINE Alu 1 303 -8 2144 154 35 27 chr10 38361247 38361448 -107227840 - MLT1B LTR MaLR -9 381 174 772 204 80 12 chr10 38361448 38361610 -107227678 - FAM SINE Alu -2 173 1 2144 154 35 27 chr10 38361610 38361784 -107227504 - MLT1B LTR MaLR -216 174 3 25 31 0 0 chr10 38363873 38363905 -107225383 + AT_rich Low_complexity Low_complexity 1 32 0 1845 112 53 40 chr10 38363929 38364232 -107225056 - AluSx SINE Alu -5 307 1 337 239 34 48 chr10 38364391 38364600 -107224688 - L1M4c LINE L1 -2859 3523 3318 3863 219 50 18 chr10 38364633 38366202 -107223086 - L1MB7 LINE L1 -17 6665 5051 2091 244 85 30 chr10 38366199 38367067 -107222221 - L1MB7 LINE L1 -4835 1707 870 * 280 302 152 15 chr10 38367844 38368243 -107221045 - L1M4c LINE L1 -860 1883 1279 807 180 0 0 chr10 38368267 38368389 -107220899 - FLAM_C SINE Alu -20 123 2 898 193 33 52 chr10 38368422 38368634 -107220654 + MER20 DNA MER1_type 6 213 -6 2372 155 11 16 chr10 38369026 38369393 -107219895 - MLT1A1 LTR MaLR 0 365 1 1993 210 47 31 chr10 38369403 38369827 -107219461 - MLT1A1-int LTR MaLR -11 1724 1294 3027 238 145 26 chr10 38369852 38370888 -107218400 - MLT1A1-int LTR MaLR -576 1159 1 1866 194 26 12 chr10 38370890 38371236 -107218052 - MLT1A1 LTR MaLR -4 361 11 1861 163 3 26 chr10 38371841 38372154 -107217134 - AluJo SINE Alu -6 306 1 181 401 23 8 chr10 38372422 38372554 -107216734 + L2 LINE L2 3172 3305 -8 180 385 0 0 chr10 38372716 38372781 -107216507 - MIR3 SINE MIR 0 208 144 530 233 70 108 chr10 38372782 38373169 -107216119 - MLT1J LTR MaLR -2 509 138 297 358 37 31 chr10 38373327 38373489 -107215799 - L2 LINE L2 -609 2705 2543 204 129 16 97 chr10 38373636 38373698 -107215590 + T-rich Low_complexity Low_complexity 1 57 0 2183 116 0 0 chr10 38374325 38374714 -107214574 - AluSx SINE Alu 0 389 1 269 231 132 44 chr10 38375844 38375935 -107213353 - MIR3 SINE MIR -29 179 81 784 294 119 49 chr10 38376118 38376570 -107212718 + MLT1K LTR MaLR 97 580 -8 267 320 13 80 chr10 38377026 38377176 -107212112 + MIR SINE MIR 120 259 -3 1891 157 0 7 chr10 38377836 38378135 -107211153 + AluJb SINE Alu 1 297 -15 2137 93 28 7 chr10 38378136 38378427 -107210861 + AluSq SINE Alu 9 305 -8 1323 154 55 18 chr10 38379667 38379940 -107209348 + AluJo SINE Alu 4 286 -26 198 299 31 62 chr10 38379997 38380094 -107209194 - L2 LINE L2 -181 3091 2998 1494 155 81 15 chr10 38380130 38380234 -107209054 + AluJo SINE Alu 17 113 -199 189 0 0 0 chr10 38380234 38380255 -107209033 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 1494 155 81 15 chr10 38380255 38380421 -107208867 + AluJo SINE Alu 113 305 -7 2274 105 3 0 chr10 38381234 38381529 -107207759 - AluSq SINE Alu -17 296 1 1639 187 13 16 chr10 38382171 38382476 -107206812 - AluJo SINE Alu -8 304 1 396 269 69 0 chr10 38383066 38383196 -107206092 + LTR33A LTR ERVL 362 500 -23 22 0 0 0 chr10 38383395 38383417 -107205871 + AT_rich Low_complexity Low_complexity 1 22 0 447 176 24 0 chr10 38383417 38383502 -107205786 - L1MA2 LINE L1 0 6304 6218 426 267 0 0 chr10 38383503 38383604 -107205684 + L1 LINE L1 2538 2638 -3508 1385 96 5 5 chr10 38383678 38383866 -107205422 - AluY SINE Alu -21 290 103 538 149 107 17 chr10 38384993 38385142 -107204146 + L1MA5 LINE L1 5980 6139 -161 3131 141 26 8 chr10 38385144 38385641 -107203647 - L1PA15 LINE L1 -5 6160 5655 838 183 0 0 chr10 38385641 38385803 -107203485 + L1MA5A LINE L1 6134 6297 0 1812 140 24 24 chr10 38387921 38388213 -107201075 - AluJo SINE Alu -15 297 6 297 217 72 0 chr10 38388457 38388526 -107200762 - L1ME3 LINE L1 0 6162 6089 21 0 0 0 chr10 38389930 38389951 -107199337 + AT_rich Low_complexity Low_complexity 1 21 0 403 333 39 107 chr10 38389992 38390449 -107198839 + L2 LINE L2 2807 3232 -40 184 310 86 58 chr10 38392021 38392195 -107197093 - L2 LINE L2 -7 3306 3128 2200 112 0 3 chr10 38393359 38393655 -107195633 - AluSg SINE Alu -15 295 1 21 0 0 0 chr10 38394355 38394376 -107194912 + AT_rich Low_complexity Low_complexity 1 21 0 536 179 154 100 chr10 38394507 38394613 -107194675 - MER69 DNA AcHobo -7 2519 2420 647 239 31 6 chr10 38394613 38394772 -107194516 - FAM SINE Alu -12 163 1 536 179 154 100 chr10 38394772 38394905 -107194383 - MER69 DNA AcHobo -106 2420 2267 1286 279 102 7 chr10 38394917 38395369 -107193919 - MER69 DNA AcHobo -641 585 91 1940 157 15 0 chr10 38395372 38395697 -107193591 + L1PA16 LINE L1 5710 6039 -127 769 140 0 0 chr10 38395697 38395804 -107193484 + AluSp SINE Alu 1 107 -206 1133 145 28 0 chr10 38395939 38396174 -107193114 + AluSg/x SINE Alu 98 337 0 710 120 37 0 chr10 38396176 38396284 -107193004 + L1PA16 LINE L1 6046 6157 -9 568 138 0 21 chr10 38397257 38397351 -107191937 - AluSg/x SINE Alu 0 309 218 496 310 97 34 chr10 38397359 38397901 -107191387 - L1ME3A LINE L1 -333 5837 5356 1753 118 12 87 chr10 38398300 38398622 -107190666 - AluSx SINE Alu -14 298 1 22 35 0 0 chr10 38399484 38399513 -107189775 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr10 38399829 38399851 -107189437 + AT_rich Low_complexity Low_complexity 1 22 0 1950 187 24 3 chr10 38400887 38401224 -107188064 - MER2 DNA MER2_type 0 344 1 612 279 15 87 chr10 38401517 38401672 -107187616 + MIR SINE MIR 12 142 -120 2674 141 28 23 chr10 38401672 38402104 -107187184 - Tigger2a DNA MER2_type 0 434 1 612 279 15 87 chr10 38402104 38402213 -107187075 + MIR SINE MIR 142 257 -5 228 67 0 0 chr10 38402757 38402787 -107186501 + (TG)n Simple_repeat Simple_repeat 2 31 0 5061 133 69 48 chr10 38403558 38404253 -107185035 - L1MC1 LINE L1 -9 6324 5604 2194 129 3 0 chr10 38404253 38404556 -107184732 - AluSx SINE Alu -8 304 1 5061 133 69 48 chr10 38404556 38404758 -107184530 - L1MC1 LINE L1 -729 5604 5408 398 291 279 18 chr10 38404954 38405287 -107184001 - L2 LINE L2 0 3272 2853 708 296 117 0 chr10 38405490 38405713 -107183575 + MIR SINE MIR 13 261 -1 1602 149 71 29 chr10 38405734 38406015 -107183273 - AluJo SINE Alu -19 293 1 354 331 76 6 chr10 38406091 38406248 -107183040 - MIR SINE MIR -73 189 22 15613 131 39 6 chr10 38406484 38408824 -107180464 - Tigger1 DNA MER2_type 0 2418 1 2264 99 0 0 chr10 38408882 38409218 -107180070 + AluSx SINE Alu 1 336 0 1076 101 0 0 chr10 38410560 38410709 -107178579 - Tigger1 DNA MER2_type -1904 514 366 1545 218 59 35 chr10 38410724 38411005 -107178283 - MLT1C LTR MaLR 0 467 172 2111 142 0 13 chr10 38411005 38411321 -107177967 - AluSx SINE Alu 0 312 1 1545 218 59 35 chr10 38411321 38411443 -107177845 - MLT1C LTR MaLR -295 172 54 739 71 41 0 chr10 38411443 38411541 -107177747 - LTR12 LTR ERV1 -133 581 480 299 204 51 41 chr10 38411542 38411640 -107177648 - LTR30 LTR ERV1 -80 642 544 1185 132 17 77 chr10 38411644 38411879 -107177409 - LTR12 LTR ERV1 -441 273 53 258 250 0 0 chr10 38411879 38411931 -107177357 - LTR30 LTR ERV1 -670 52 1 235 100 33 150 chr10 38411933 38411993 -107177295 - MLT1B LTR MaLR -336 54 2 1736 199 66 9 chr10 38412099 38412536 -107176752 + L1 LINE L1 3132 3593 -2553 2064 198 22 3 chr10 38412680 38413038 -107176250 + MLT1A1 LTR MaLR 1 365 0 2008 135 3 35 chr10 38414102 38414244 -107175044 + AluJo SINE Alu 1 146 -166 2210 90 0 51 chr10 38414244 38414556 -107174732 + AluY SINE Alu 1 296 -15 2008 135 3 35 chr10 38414556 38414731 -107174557 + AluJo SINE Alu 146 308 -4 928 176 0 0 chr10 38416639 38416804 -107172484 + L1MA4 LINE L1 6136 6300 0 598 321 149 28 chr10 38416834 38417336 -107171952 + L2 LINE L2 372 934 -2380 492 277 125 35 chr10 38417337 38417626 -107171662 + L2 LINE L2 1152 1466 -1848 6398 113 6 1 chr10 38417626 38418505 -107170783 - THE1B-int LTR MaLR -697 883 1 2218 140 50 34 chr10 38418505 38418863 -107170425 - THE1B LTR MaLR 0 364 1 1883 173 61 6 chr10 38418966 38419308 -107169980 - MLT1A1 LTR MaLR -4 361 1 564 153 12 0 chr10 38419554 38419639 -107169649 - Tigger7 DNA MER2_type -1 2486 2401 1181 196 120 61 chr10 38419641 38419795 -107169493 + MER2 DNA MER2_type 1 145 -200 2288 130 39 33 chr10 38419795 38420157 -107169131 + THE1B LTR MaLR 1 364 0 1181 196 120 61 chr10 38420157 38420328 -107168960 + MER2 DNA MER2_type 145 345 0 855 93 0 7 chr10 38420330 38420470 -107168818 - Tigger7 DNA MER2_type -87 2400 2262 594 238 16 8 chr10 38420692 38420818 -107168470 - L2 LINE L2 -1809 1505 1379 367 300 65 102 chr10 38420906 38421166 -107168122 + L2 LINE L2 2827 3064 -208 2510 150 30 30 chr10 38421166 38421592 -107167696 + MSTB LTR MaLR 1 426 0 367 300 65 102 chr10 38421592 38421794 -107167494 + L2 LINE L2 3064 3272 0 222 279 164 49 chr10 38423975 38424219 -107165069 - L3b LINE CR1 -92 1491 1220 2108 121 0 23 chr10 38424423 38424730 -107164558 - AluSq SINE Alu -13 300 1 654 168 0 0 chr10 38424882 38424983 -107164305 + AluJ/FLAM SINE Alu 2 102 -210 373 100 0 0 chr10 38425264 38425314 -107163974 + Alu SINE Alu 1 50 -252 911 209 0 0 chr10 38425632 38425790 -107163498 + FRAM SINE Alu 1 157 -19 21 36 0 0 chr10 38425794 38425822 -107163466 + AT_rich Low_complexity Low_complexity 1 28 0 344 303 110 26 chr10 38427270 38427425 -107161863 - MIR SINE MIR -92 170 3 1887 163 0 3 chr10 38427655 38427950 -107161338 - AluJo SINE Alu -18 294 1 352 298 107 0 chr10 38429176 38429297 -107159991 - MIR3 SINE MIR -22 186 53 2203 106 19 13 chr10 38429769 38430080 -107159208 + AluSq SINE Alu 1 313 0 326 277 26 26 chr10 38432833 38432988 -107156300 - L1MC4a LINE L1 -1845 5963 5809 778 312 70 19 chr10 38433347 38433876 -107155412 - HAL1 LINE L1 -794 1713 1158 450 248 9 18 chr10 38433875 38433990 -107155298 + L2 LINE L2 3192 3305 -8 * 528 223 100 92 chr10 38433996 38434247 -107155041 - HAL1 LINE L1 -1351 1156 904 287 288 14 50 chr10 38434257 38434396 -107154892 - HAL1 LINE L1 -1714 793 660 25 51 0 0 chr10 38435347 38435386 -107153902 + AT_rich Low_complexity Low_complexity 1 39 0 276 270 200 0 chr10 38435386 38435586 -107153702 - L1ME4a LINE L1 -1 6120 5881 2071 106 3 43 chr10 38435601 38435923 -107153365 + AluSc SINE Alu 1 309 0 261 301 52 23 chr10 38436042 38436215 -107153073 - L1ME4a LINE L1 -1018 5128 4951 962 150 6 6 chr10 38436415 38436575 -107152713 - FRAM SINE Alu -9 167 8 223 315 43 11 chr10 38436778 38436870 -107152418 + MIR SINE MIR 58 152 -110 2015 98 98 0 chr10 38437185 38437462 -107151826 + AluSx SINE Alu 1 304 -8 876 215 0 0 chr10 38438026 38438184 -107151104 + AluJb SINE Alu 137 294 -18 552 179 0 0 chr10 38438216 38438328 -107150960 + GA-rich Low_complexity Low_complexity 3 114 0 359 330 17 0 chr10 38438638 38438773 -107150515 + MIR SINE MIR 21 157 -68 635 274 74 16 chr10 38438930 38439120 -107150168 + MIR SINE MIR 41 241 -21 471 302 124 70 chr10 38439473 38439853 -107149435 + L2 LINE L2 1798 2221 -1093 1188 220 5 0 chr10 38439853 38440071 -107149217 - MER58A DNA MER1_type -3 221 3 471 302 124 70 chr10 38440071 38440272 -107149016 + L2 LINE L2 2221 2410 -904 454 271 82 0 chr10 38440334 38440456 -107148832 + MIR SINE MIR 25 156 -106 543 325 94 39 chr10 38440516 38440984 -107148304 + L2 LINE L2 2467 2960 -354 446 271 28 0 chr10 38441955 38442062 -107147226 - L2 LINE L2 0 3313 3204 951 154 0 146 chr10 38442124 38442364 -107146924 - MER3 DNA MER1_type -4 205 1 872 159 8 0 chr10 38442977 38443109 -107146179 + FLAM_C SINE Alu 1 133 0 323 231 160 59 chr10 38443347 38443516 -107145772 + MIR3 SINE MIR 13 198 -10 2948 98 0 3 chr10 38443740 38444116 -107145172 + THE1C LTR MaLR 1 375 0 1560 185 0 38 chr10 38444365 38444684 -107144604 - AluJo SINE Alu -5 307 1 426 251 11 6 chr10 38445586 38445761 -107143527 + (CA)n Simple_repeat Simple_repeat 2 177 0 450 0 0 0 chr10 38445890 38445940 -107143348 + (TG)n Simple_repeat Simple_repeat 1 50 0 407 59 0 0 chr10 38446840 38446891 -107142397 - MADE1 DNA Mariner -5 75 25 4239 36 2 0 chr10 38446891 38447386 -107141902 - L1PA5 LINE L1 -1704 4442 3947 8292 37 1 1 chr10 38447386 38449101 -107140187 + L1PA5 LINE L1 4439 6154 0 327 50 0 0 chr10 38449101 38449141 -107140147 - MADE1 DNA Mariner -40 40 1 1979 161 34 10 chr10 38449648 38450058 -107139230 - L1 LINE L1 -1481 4665 4246 239 356 150 28 chr10 38450154 38450401 -107138887 - L2 LINE L2 -3 3269 2993 849 167 0 0 chr10 38450596 38450809 -107138479 + (TG)n Simple_repeat Simple_repeat 1 213 0 404 315 5 79 chr10 38452092 38452308 -107136980 - MIR SINE MIR -43 219 20 224 235 15 73 chr10 38453578 38453646 -107135642 - L2 LINE L2 -1 3271 3208 1501 188 21 73 chr10 38453754 38454190 -107135098 + MLT1F LTR MaLR 130 542 0 205 353 66 22 chr10 38454197 38454333 -107134955 - L2 LINE L2 -31 3282 3141 243 273 63 77 chr10 38454770 38454913 -107134375 - L2 LINE L2 -9 3304 3164 686 228 76 84 chr10 38454979 38455242 -107134046 - MIR SINE MIR 0 262 2 1953 160 13 0 chr10 38455431 38455731 -107133557 + AluJo SINE Alu 1 304 -8 236 221 70 35 chr10 38455915 38456001 -107133287 + MIR SINE MIR 45 133 -75 22 56 0 0 chr10 38456790 38456826 -107132462 + AT_rich Low_complexity Low_complexity 1 36 0 2174 152 33 30 chr10 38456848 38457211 -107132077 - THE1B LTR MaLR 0 364 1 299 339 36 18 chr10 38457264 38457376 -107131912 - L2 LINE L2 -21 3251 3138 2441 118 113 13 chr10 38457540 38457929 -107131359 - MSTA LTR MaLR 0 428 1 317 268 29 80 chr10 38459806 38459944 -107129344 - MIR SINE MIR -113 149 19 318 343 57 11 chr10 38460614 38460789 -107128499 - MIR SINE MIR -53 209 27 360 0 0 0 chr10 38460811 38460851 -107128437 + (TTCC)n Simple_repeat Simple_repeat 1 40 0 1149 69 29 0 chr10 38460851 38461026 -107128262 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 345 160 11 32 chr10 38461029 38461123 -107128165 + CT-rich Low_complexity Low_complexity 1 92 0 824 182 0 0 chr10 38461123 38461255 -107128033 - FRAM SINE Alu -25 151 20 337 177 23 0 chr10 38461267 38461346 -107127942 - L1P4 LINE L1 -370 5781 5698 470 295 60 7 chr10 38461929 38462078 -107127210 - MER69A DNA AcHobo -19 158 2 22 0 0 0 chr10 38462637 38462659 -107126629 + AT_rich Low_complexity Low_complexity 1 22 0 1445 158 0 0 chr10 38462721 38462936 -107126352 - AluSg/x SINE Alu -13 297 83 3234 161 19 3 chr10 38462936 38463500 -107125788 - L1MB3 LINE L1 -32 6151 5579 2154 152 128 8 chr10 38463568 38463950 -107125338 - MSTA LTR MaLR 0 428 1 204 111 0 0 chr10 38464170 38464206 -107125082 + (T)n Simple_repeat Simple_repeat 1 36 0 39 0 0 0 chr10 38464496 38464535 -107124753 + AT_rich Low_complexity Low_complexity 1 39 0 1526 196 7 0 chr10 38464538 38464818 -107124470 - AluJo SINE Alu -30 282 1 1341 203 3 38 chr10 38465159 38465280 -107124008 + AluJo SINE Alu 2 126 -186 2314 86 0 3 chr10 38465280 38465572 -107123716 - AluSc SINE Alu -18 291 1 1341 203 3 38 chr10 38465572 38465740 -107123548 + AluJo SINE Alu 126 281 -31 186 354 50 62 chr10 38467157 38467222 -107122066 + MIR SINE MIR 34 98 -164 1488 169 9 91 chr10 38467222 38467396 -107121892 - AluJo SINE Alu -18 294 156 2213 132 0 0 chr10 38467396 38467692 -107121596 - AluSq SINE Alu -17 296 1 1488 169 9 91 chr10 38467692 38467837 -107121451 - AluJo SINE Alu -156 156 1 186 354 50 62 chr10 38467837 38467932 -107121356 + MIR SINE MIR 98 192 -70 487 320 91 67 chr10 38468278 38468412 -107120876 - L2 LINE L2 -11 3302 3173 2261 127 0 0 chr10 38468412 38468719 -107120569 + AluSx SINE Alu 1 307 -5 487 320 91 67 chr10 38468719 38468956 -107120332 - L2 LINE L2 -140 3173 2922 966 180 0 0 chr10 38469991 38470152 -107119136 - FRAM SINE Alu -12 164 4 5802 119 23 11 chr10 38470152 38471697 -107117591 - L1MA3 LINE L1 -157 6148 4585 375 230 0 8 chr10 38471768 38471860 -107117428 + L1MC1 LINE L1 5678 5765 -356 8223 230 23 6 chr10 38471887 38473857 -107115431 - L1M4 LINE L1 -1069 5077 3074 30 27 0 0 chr10 38473874 38473911 -107115377 + AT_rich Low_complexity Low_complexity 1 37 0 260 172 0 47 chr10 38473917 38473981 -107115307 + L1MC1 LINE L1 5958 6018 -315 * 2484 159 43 50 chr10 38473973 38474645 -107114643 - L1MCa LINE L1 -4589 1837 1087 563 223 41 99 chr10 38474652 38474944 -107114344 + L1MC5 LINE L1 7657 7931 -30 250 277 96 12 chr10 38475867 38475950 -107113338 + MIR SINE MIR 3 92 -170 1154 174 28 9 chr10 38475996 38476208 -107113080 - Tigger1 DNA MER2_type -1 2417 2202 813 190 0 21 chr10 38476190 38476332 -107112956 - Tigger1 DNA MER2_type -2256 162 24 * 1395 176 0 62 chr10 38476341 38476647 -107112641 - L1MA7 LINE L1 -32 6259 5973 250 318 205 0 chr10 38476648 38476799 -107112489 + MIR SINE MIR 78 259 -3 1544 171 16 68 chr10 38476926 38477099 -107112189 - AluJo SINE Alu -7 305 155 2283 110 3 0 chr10 38477099 38477398 -107111890 - AluSx SINE Alu -12 300 1 1544 171 16 68 chr10 38477398 38477546 -107111742 - AluJo SINE Alu -157 155 1 2259 115 0 0 chr10 38477550 38477866 -107111422 - AluSx SINE Alu 0 316 1 229 276 181 9 chr10 38477886 38478002 -107111286 + L2 LINE L2 3178 3313 0 186 103 0 0 chr10 38480869 38480898 -107108390 + (T)n Simple_repeat Simple_repeat 1 29 0 294 287 223 25 chr10 38481814 38482016 -107107272 + L3 LINE CR1 517 758 -819 337 321 113 13 chr10 38482157 38482316 -107106972 + MIR SINE MIR 46 220 -42 619 193 37 0 chr10 38482400 38482535 -107106753 + FLAM_C SINE Alu 7 145 0 427 357 67 20 chr10 38482594 38482950 -107106338 + L3 LINE CR1 829 1201 -376 210 37 0 0 chr10 38483000 38483027 -107106261 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1287 146 0 119 chr10 38483036 38483304 -107105984 - AluJb SINE Alu -48 264 29 1878 224 43 14 chr10 38483345 38483831 -107105457 - MER74B LTR ERVL -67 555 56 369 311 105 31 chr10 38483844 38484101 -107105187 + L3 LINE CR1 1301 1576 -1 189 0 0 0 chr10 38484517 38484538 -107104750 + (T)n Simple_repeat Simple_repeat 1 21 0 324 239 11 23 chr10 38484632 38484720 -107104568 + MIR3 SINE MIR 119 205 -3 224 333 62 0 chr10 38484864 38484945 -107104343 - MIR SINE MIR -118 144 59 2352 88 0 22 chr10 38485363 38485681 -107103607 - AluY SINE Alu 0 311 1 991 168 0 0 chr10 38485701 38485862 -107103426 - L1MA3 LINE L1 -4 6301 6141 538 260 13 27 chr10 38486681 38486831 -107102457 + MIR SINE MIR 115 262 0 238 284 0 0 chr10 38486980 38487054 -107102234 + (TG)n Simple_repeat Simple_repeat 2 75 0 466 258 13 0 chr10 38487506 38487665 -107101623 + CT-rich Low_complexity Low_complexity 3 163 0 402 337 72 66 chr10 38487693 38488028 -107101260 - L2 LINE L2 -17 3255 2919 467 250 108 56 chr10 38488260 38488668 -107100620 - L1MDa LINE L1 -915 5625 5197 338 281 117 39 chr10 38488742 38489126 -107100162 - L1MDa LINE L1 -1460 5080 4667 2513 258 45 49 chr10 38489162 38490099 -107099189 + L1ME LINE L1 6 938 -5132 43695 34 22 1 chr10 38490139 38496166 -107093122 + L1PA3 LINE L1 1 6155 0 1458 267 53 64 chr10 38496160 38496358 -107092930 + L1ME LINE L1 968 1167 -5094 * 1711 166 53 3 chr10 38496358 38496642 -107092646 + AluJb SINE Alu 2 299 -13 1458 267 53 64 chr10 38496642 38497345 -107091943 + L1ME LINE L1 1167 1859 -4402 760 270 70 90 chr10 38497372 38497639 -107091649 - L1MDa LINE L1 -1899 4641 4370 5406 45 0 2 chr10 38497639 38498286 -107091002 + L1PA5 LINE L1 5522 6167 0 760 270 70 90 chr10 38498286 38498351 -107090937 - L1MDa LINE L1 -2170 4370 4305 2447 88 0 0 chr10 38498351 38498659 -107090629 - AluSx SINE Alu -4 308 1 760 270 70 90 chr10 38498659 38499165 -107090123 - L1MDa LINE L1 -2235 4305 3818 868 82 8 0 chr10 38499165 38499287 -107090001 + MSTA LTR MaLR 1 123 -305 526 291 113 25 chr10 38499327 38500042 -107089246 - L1MDa LINE L1 -2719 3821 3044 402 206 61 92 chr10 38500150 38500288 -107089000 - L1MDa LINE L1 -3794 2746 2605 216 0 0 0 chr10 38500288 38500312 -107088976 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1481 173 11 29 chr10 38500315 38500593 -107088695 - AluJo SINE Alu -31 281 9 402 206 61 92 chr10 38500593 38500678 -107088610 - L1MDa LINE L1 -3937 2603 2526 2180 142 0 0 chr10 38500702 38501013 -107088275 - AluSx SINE Alu -1 311 1 860 275 82 46 chr10 38501427 38501888 -107087400 - L1MDa LINE L1 -892 2009 1585 180 278 19 0 chr10 38502881 38502935 -107086353 - L2 LINE L2 -573 2741 2687 1695 172 14 10 chr10 38502935 38503232 -107086056 + AluJo SINE Alu 1 298 -14 462 36 0 0 chr10 38503635 38503691 -107085597 + (GGAA)n Simple_repeat Simple_repeat 1 56 0 3063 80 3 0 chr10 38504990 38505353 -107083935 + THE1B LTR MaLR 1 364 0 189 147 88 0 chr10 38507410 38507444 -107081844 - L2 LINE L2 -13 3300 3264 * 387 219 130 16 chr10 38507418 38507541 -107081747 - MIR SINE MIR -15 247 111 409 189 154 35 chr10 38508115 38508258 -107081030 + L2 LINE L2 3108 3267 -46 329 171 0 14 chr10 38508276 38508346 -107080942 + (TG)n Simple_repeat Simple_repeat 2 70 0 2050 161 0 0 chr10 38508385 38508689 -107080599 - AluSq SINE Alu -9 304 1 1749 145 17 14 chr10 38508759 38509049 -107080239 + MER47A DNA MER2_type 76 366 0 227 359 0 0 chr10 38509491 38509619 -107079669 - L1M4 LINE L1 -3072 3074 2947 1114 140 11 0 chr10 38509622 38509808 -107079480 - L1MA5 LINE L1 -1 6299 6112 2292 107 0 19 chr10 38509810 38510119 -107079169 + AluSq SINE Alu 1 303 -10 4777 89 5 2 chr10 38510131 38510381 -107078907 + L1PB1 LINE L1 5531 5779 -372 234 0 0 0 chr10 38510381 38510407 -107078881 + (TA)n Simple_repeat Simple_repeat 1 26 0 4777 89 5 2 chr10 38510407 38510773 -107078515 + L1PB1 LINE L1 5779 6149 -2 337 285 81 99 chr10 38510814 38511260 -107078028 - L1M4 LINE L1 -3169 2977 2540 1684 188 3 26 chr10 38512266 38512574 -107076714 + AluJo SINE Alu 5 305 -7 1928 143 4 0 chr10 38513175 38513499 -107075789 + AluSx SINE Alu 1 325 0 216 122 0 0 chr10 38513696 38513737 -107075551 + (CAGAGA)n Simple_repeat Simple_repeat 2 42 0 473 277 150 27 chr10 38513911 38514341 -107074947 - LTR33 LTR ERVL -19 502 1 217 334 93 72 chr10 38514517 38514894 -107074394 + L2 LINE L2 2807 3191 -81 207 304 80 9 chr10 38516736 38516848 -107072440 + MIR SINE MIR 46 165 -97 267 349 48 24 chr10 38516942 38517068 -107072220 + MIR SINE MIR 16 144 -64 1215 190 5 0 chr10 38517235 38517446 -107071842 - L1PA16 LINE L1 -9 6157 5946 737 211 0 0 chr10 38517448 38517576 -107071712 - FLAM_A SINE Alu -5 128 1 323 228 69 10 chr10 38517588 38517689 -107071599 - MIR SINE MIR -74 188 82 234 62 0 0 chr10 38518192 38518224 -107071064 + (TTTA)n Simple_repeat Simple_repeat 4 35 0 3220 190 34 19 chr10 38519251 38519872 -107069416 - LTR27 LTR ERV1 0 636 7 203 242 16 16 chr10 38520383 38520445 -107068843 + T-rich Low_complexity Low_complexity 2 63 0 247 308 176 22 chr10 38520665 38520892 -107068396 - MIR SINE MIR 0 262 1 653 219 163 0 chr10 38520901 38521061 -107068227 - MER5A DNA MER1_type -3 186 1 180 0 0 0 chr10 38524397 38524417 -107064871 + (A)n Simple_repeat Simple_repeat 1 20 0 189 0 0 0 chr10 38524417 38524438 -107064850 + (TA)n Simple_repeat Simple_repeat 2 22 0 2468 82 3 0 chr10 38524803 38525108 -107064180 + AluSp SINE Alu 1 306 -7 5933 142 18 2 chr10 38525263 38526335 -107062953 + L1PA13 LINE L1 5048 6161 -2 833 204 42 103 chr10 38526337 38526667 -107062621 + L1ME1 LINE L1 5877 6164 0 22 35 0 0 chr10 38526667 38526696 -107062592 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr10 38526708 38526729 -107062559 + AT_rich Low_complexity Low_complexity 1 21 0 1890 109 109 0 chr10 38528154 38528430 -107060858 - AluSx SINE Alu -6 306 1 251 309 43 68 chr10 38528527 38528689 -107060599 + MIR SINE MIR 28 185 -77 291 85 0 0 chr10 38529638 38529685 -107059603 + (TG)n Simple_repeat Simple_repeat 2 48 0 2188 101 14 0 chr10 38529685 38529972 -107059316 - AluSp SINE Alu -22 291 1 2452 79 0 0 chr10 38530913 38531216 -107058072 - AluY SINE Alu -7 304 2 4232 93 21 5 chr10 38531222 38531802 -107057486 - L1MA3 LINE L1 -2 6303 5715 360 0 0 0 chr10 38532033 38532073 -107057215 + (TG)n Simple_repeat Simple_repeat 2 41 0 183 345 71 9 chr10 38532780 38532893 -107056395 - MIR SINE MIR -64 144 25 294 250 250 7 chr10 38532928 38533068 -107056220 + MIR SINE MIR 1 174 -88 615 258 19 6 chr10 38533105 38533264 -107056024 - MIR SINE MIR 0 262 102 2460 86 0 0 chr10 38533373 38533676 -107055612 + AluSx SINE Alu 1 303 -9 894 221 7 0 chr10 38535588 38535742 -107053546 - FRAM SINE Alu -11 155 1 193 218 0 184 chr10 38535777 38535825 -107053463 + L2 LINE L2 3243 3270 -43 687 250 113 79 chr10 38535825 38536357 -107052931 - MLT1H1 LTR MaLR -4 551 2 193 218 0 184 chr10 38536357 38536395 -107052893 + L2 LINE L2 3270 3313 0 3936 135 75 26 chr10 38536910 38537563 -107051725 - L1PA14 LINE L1 -12 6149 5465 375 307 105 66 chr10 38538052 38538654 -107050634 - L2 LINE L2 -337 2977 2353 1752 126 24 37 chr10 38538660 38538954 -107050334 + AluJo SINE Alu 1 290 -22 183 236 303 0 chr10 38539152 38539241 -107050047 + MER5A DNA MER1_type 45 160 -29 305 251 105 55 chr10 38541639 38541929 -107047359 - L1ME LINE L1 -425 5696 5385 397 288 71 41 chr10 38542063 38542456 -107046832 - L1ME LINE L1 -962 5184 4780 189 313 0 0 chr10 38542824 38542872 -107046416 - L2 LINE L2 -16 3256 3209 360 309 112 20 chr10 38543081 38543233 -107046055 + MIR3 SINE MIR 40 205 -3 229 196 36 45 chr10 38543522 38543634 -107045654 + (TATAA)n Simple_repeat Simple_repeat 3 113 0 221 191 0 0 chr10 38543712 38543754 -107045534 - MIR SINE MIR -108 154 113 27 0 0 0 chr10 38545097 38545124 -107044164 + AT_rich Low_complexity Low_complexity 1 27 0 3904 193 69 28 chr10 38545142 38546114 -107043174 - L1MC3 LINE L1 -16 7769 6733 350 284 47 24 chr10 38547103 38547230 -107042058 + MIR3 SINE MIR 51 180 -28 361 360 52 0 chr10 38547738 38547874 -107041414 - MIR3 SINE MIR -28 180 38 216 354 38 0 chr10 38547920 38547999 -107041289 + L2 LINE L2 3191 3272 -41 530 321 19 71 chr10 38548103 38548411 -107040877 - L2 LINE L2 -3 3269 2978 2150 130 0 0 chr10 38548857 38549150 -107040138 + AluSx SINE Alu 1 293 -19 233 329 31 31 chr10 38549602 38549763 -107039525 - L2 LINE L2 -783 2531 2371 2028 134 3 16 chr10 38549909 38550216 -107039072 - AluSq SINE Alu -10 303 1 235 284 181 0 chr10 38550280 38550396 -107038892 - MIR3 SINE MIR -30 178 42 1411 185 4 36 chr10 38552097 38552373 -107036915 - AluJb SINE Alu -25 287 21 700 200 33 0 chr10 38552391 38552511 -107036777 - FLAM_C SINE Alu -9 124 1 31 44 0 0 chr10 38554021 38554066 -107035222 + AT_rich Low_complexity Low_complexity 1 45 0 238 354 83 21 chr10 38554187 38554331 -107034957 - MIR SINE MIR -90 172 20 206 206 16 0 chr10 38555038 38555101 -107034187 + (TG)n Simple_repeat Simple_repeat 2 65 0 186 289 44 0 chr10 38555942 38555987 -107033301 - MIR SINE MIR -126 82 36 1890 128 30 0 chr10 38559143 38559409 -107029879 + AluSx SINE Alu 17 290 -22 333 303 121 0 chr10 38560614 38560746 -107028542 - L2 LINE L2 -7 3265 3118 937 219 11 22 chr10 38560794 38560972 -107028316 + MER45A DNA AcHobo 1 176 -2 5756 79 32 0 chr10 38561273 38562049 -107027239 - L1PA11 LINE L1 -1 6173 5373 532 290 52 26 chr10 38562049 38562280 -107027008 - L2 LINE L2 -27 3286 3050 514 185 0 0 chr10 38562419 38562500 -107026788 + AluJ/FLAM SINE Alu 2 82 -230 54 68 0 0 chr10 38563011 38563114 -107026174 + AT_rich Low_complexity Low_complexity 1 103 0 2175 113 0 3 chr10 38563550 38563852 -107025436 - AluSq SINE Alu -12 301 1 224 219 0 0 chr10 38567382 38567423 -107021865 + CT-rich Low_complexity Low_complexity 6 46 0 1837 219 27 3 chr10 38567879 38568254 -107021034 - MLT1B LTR MaLR -6 384 1 256 346 19 9 chr10 38568400 38568507 -107020781 + MER5A DNA MER1_type 79 186 -3 393 328 78 47 chr10 38568594 38569079 -107020209 + L2 LINE L2 2257 2756 -558 183 247 86 32 chr10 38569115 38569208 -107020080 - MER5A DNA MER1_type -24 165 68 207 344 131 0 chr10 38569401 38569523 -107019765 + L2 LINE L2 2943 3080 -192 213 238 0 0 chr10 38569633 38569675 -107019613 + L2 LINE L2 3270 3311 -2 1468 207 7 13 chr10 38569928 38570227 -107019061 + AluJo SINE Alu 3 299 -13 1121 246 36 71 chr10 38570304 38570799 -107018489 + MLT1H LTR MaLR 72 549 0 347 366 57 18 chr10 38571884 38572111 -107017177 + MIR SINE MIR 7 242 -20 1739 160 20 10 chr10 38574043 38574343 -107014945 + AluJb SINE Alu 1 303 -9 2095 122 3 3 chr10 38574957 38575244 -107014044 - AluSq SINE Alu -26 287 1 4970 137 3 20 chr10 38575512 38576133 -107013155 + L1PA16 LINE L1 5420 6027 -139 2310 100 0 3 chr10 38576133 38576433 -107012855 + AluSx SINE Alu 1 299 -13 4970 137 3 20 chr10 38576433 38576565 -107012723 + L1PA16 LINE L1 6027 6160 -6 797 242 21 0 chr10 38576574 38576764 -107012524 - MER20 DNA MER1_type -3 216 23 1503 151 0 46 chr10 38576870 38576996 -107012292 + L1PA16 LINE L1 5914 6023 -143 2251 107 0 3 chr10 38576996 38577296 -107011992 + AluSx SINE Alu 1 299 -13 1503 151 0 46 chr10 38577296 38577428 -107011860 + L1PA16 LINE L1 6023 6160 -6 1006 245 14 0 chr10 38577437 38577649 -107011639 - MER20 DNA MER1_type -3 216 2 22 0 0 0 chr10 38577955 38577977 -107011311 + AT_rich Low_complexity Low_complexity 1 22 0 204 322 78 92 chr10 38578449 38578732 -107010556 + L2 LINE L2 2924 3202 -70 1727 157 14 17 chr10 38580223 38580516 -107008772 - AluJo SINE Alu -20 292 1 199 333 207 30 chr10 38580880 38581015 -107008273 + L2 LINE L2 3114 3272 0 216 111 0 0 chr10 38581704 38581740 -107007548 + (CA)n Simple_repeat Simple_repeat 2 37 0 180 231 0 0 chr10 38583862 38583940 -107005348 + (TA)n Simple_repeat Simple_repeat 2 79 0 1645 176 11 0 chr10 38583960 38584232 -107005056 - AluJb SINE Alu -37 275 1 876 234 46 0 chr10 38584366 38584563 -107004725 + MIR SINE MIR 3 208 -54 569 187 16 41 chr10 38585775 38585898 -107003390 + MER45A DNA AcHobo 54 173 -5 21 0 0 0 chr10 38586854 38586875 -107002413 + AT_rich Low_complexity Low_complexity 1 21 0 2089 121 0 7 chr10 38587129 38587419 -107001869 - AluSx SINE Alu -24 288 1 666 230 29 35 chr10 38587596 38587770 -107001518 + MER5B DNA MER1_type 1 173 -5 334 296 72 16 chr10 38587785 38587910 -107001378 - MER5A DNA MER1_type 0 189 58 306 367 47 33 chr10 38588196 38588558 -107000730 - L2 LINE L2 -1906 1408 1042 2953 133 4 0 chr10 38588930 38589380 -106999908 - L1PA16 LINE L1 -9 6157 5706 2100 114 24 0 chr10 38590006 38590126 -106999162 + AluSx SINE Alu 4 120 -192 387 0 0 0 chr10 38590126 38590169 -106999119 + (CA)n Simple_repeat Simple_repeat 2 44 0 2100 114 24 0 chr10 38590169 38590338 -106998950 + AluSx SINE Alu 120 300 -12 277 319 101 0 chr10 38590582 38590701 -106998587 + L2 LINE L2 3142 3272 0 21 0 0 0 chr10 38591441 38591462 -106997826 + AT_rich Low_complexity Low_complexity 1 21 0 466 91 26 0 chr10 38592131 38592208 -106997080 + (TTCC)n Simple_repeat Simple_repeat 4 82 0 232 352 93 62 chr10 38592404 38592597 -106996691 - L2 LINE L2 -6 3266 3068 429 287 12 57 chr10 38594701 38594948 -106994340 + MER106A DNA MER1_type 1 236 0 1772 111 100 7 chr10 38594957 38595227 -106994061 + AluSx SINE Alu 7 301 -11 24 53 0 0 chr10 38595815 38595853 -106993435 + AT_rich Low_complexity Low_complexity 1 38 0 8622 153 106 67 chr10 38596405 38597175 -106992113 + L1MCa LINE L1 7 745 -5681 1680 186 0 21 chr10 38597175 38597460 -106991828 - AluJo SINE Alu -33 279 1 8622 153 106 67 chr10 38597460 38598440 -106990848 + L1MCa LINE L1 745 1874 -4552 5685 37 0 0 chr10 38598440 38599117 -106990171 + L1PA4 LINE L1 5474 6150 -5 8622 153 106 67 chr10 38599117 38599689 -106989599 + L1MCa LINE L1 1874 2422 -4004 1388 197 25 6 chr10 38599685 38600050 -106989238 + L1MCa LINE L1 3123 3494 -2932 * 4681 223 64 9 chr10 38600053 38601943 -106987345 + L1MCa LINE L1 3910 5911 -702 859 273 78 6 chr10 38601959 38602307 -106986981 + MLT1C LTR MaLR 83 455 -12 528 262 77 22 chr10 38602333 38602516 -106986772 + MIR SINE MIR 23 215 -47 2323 161 29 7 chr10 38602811 38603220 -106986068 + MSTB LTR MaLR 1 418 -8 198 0 0 0 chr10 38604006 38604028 -106985260 + (A)n Simple_repeat Simple_repeat 1 22 0 2567 168 17 0 chr10 38604269 38604687 -106984601 - MSTB LTR MaLR 0 426 2 285 242 42 21 chr10 38606691 38606786 -106982502 + CT-rich Low_complexity Low_complexity 4 100 0 752 276 5 23 chr10 38607408 38607625 -106981663 - Charlie1 DNA MER1_type -2542 219 7 345 302 18 12 chr10 38607824 38607993 -106981295 + CT-rich Low_complexity Low_complexity 1 170 0 266 296 80 63 chr10 38608129 38608297 -106980991 - L1M4 LINE L1 -2979 3167 3003 3136 149 0 13 chr10 38608297 38608826 -106980462 - L1PA16 LINE L1 0 6166 5645 266 296 80 63 chr10 38608826 38609417 -106979871 - L1M4 LINE L1 -3143 3003 2395 5571 236 75 34 chr10 38610078 38610734 -106978554 - L1ME1 LINE L1 -5 6230 5602 1139 261 4 0 chr10 38610734 38610972 -106978316 + MER8 DNA MER2_type 1 239 0 5571 236 75 34 chr10 38610972 38613589 -106975699 - L1ME1 LINE L1 -633 5602 2835 439 275 79 4 chr10 38613594 38613823 -106975465 - L1ME1 LINE L1 -3698 2517 2272 180 0 0 0 chr10 38613830 38613850 -106975438 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 2864 72 0 0 chr10 38613850 38614237 -106975051 - L1PA8 LINE L1 -24 6148 5762 243 259 12 0 chr10 38614255 38614340 -106974948 - L1ME1 LINE L1 -4085 2311 2226 269 286 19 67 chr10 38614345 38614450 -106974838 + MIR SINE MIR 163 262 0 338 57 19 0 chr10 38615301 38615354 -106973934 + (TA)n Simple_repeat Simple_repeat 1 54 0 688 157 0 98 chr10 38616332 38616485 -106972803 + FLAM_C SINE Alu 5 142 -1 900 196 0 0 chr10 38616512 38616655 -106972633 + AluJb SINE Alu 140 282 -30 216 0 0 0 chr10 38616659 38616683 -106972605 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 396 219 23 0 chr10 38618273 38618401 -106970887 + (TG)n Simple_repeat Simple_repeat 1 131 0 180 237 129 54 chr10 38619048 38619141 -106970147 + MIR3 SINE MIR 12 111 -97 237 193 67 118 chr10 38619335 38619454 -106969834 - MER94 DNA DNA -15 119 7 21 36 0 0 chr10 38620500 38620528 -106968760 + AT_rich Low_complexity Low_complexity 1 28 0 185 339 42 73 chr10 38620631 38620823 -106968465 - L2 LINE L2 -358 2956 2771 707 194 58 7 chr10 38621306 38621461 -106967827 - MIR SINE MIR -10 252 90 696 219 0 0 chr10 38622138 38622257 -106967031 - FLAM_A SINE Alu -17 125 7 428 308 7 87 chr10 38622280 38622569 -106966719 + L1MC4a LINE L1 2061 2326 -4070 347 299 61 15 chr10 38622630 38622827 -106966461 + L1MC4a LINE L1 3772 3977 -2238 285 267 136 23 chr10 38623136 38623312 -106965976 + L1MC4a LINE L1 5778 5973 -1904 371 178 0 0 chr10 38623648 38623721 -106965567 - AluJ/FLAM SINE Alu -225 77 5 1729 157 16 42 chr10 38624752 38625058 -106964230 - AluJo SINE Alu -13 299 2 227 356 20 94 chr10 38625079 38625228 -106964060 + L2 LINE L2 3127 3264 -8 1787 177 0 10 chr10 38625364 38625669 -106963619 - AluJo SINE Alu -9 303 2 276 270 106 74 chr10 38625782 38625971 -106963317 - L3b LINE CR1 -119 1464 1270 735 147 7 44 chr10 38626913 38627049 -106962239 - FLAM_C SINE Alu -10 133 3 543 301 38 60 chr10 38627164 38627430 -106961858 - MIR SINE MIR 0 262 3 1573 199 145 43 chr10 38628318 38628786 -106960502 - MLT2B1 LTR ERVL -2 518 3 759 175 32 0 chr10 38628881 38629007 -106960281 + FLAM_C SINE Alu 1 130 -3 2120 99 0 13 chr10 38629142 38629444 -106959844 - AluY SINE Alu -13 298 1 181 383 78 0 chr10 38630025 38630153 -106959135 - L2 LINE L2 -220 3052 2915 4647 189 46 57 chr10 38630222 38630850 -106958438 - Charlie1a DNA MER1_type -1308 1453 820 1648 169 10 24 chr10 38630850 38631145 -106958143 + AluJo SINE Alu 1 291 -21 4647 189 46 57 chr10 38631145 38631918 -106957370 - Charlie1a DNA MER1_type -1941 820 1 1795 142 0 0 chr10 38631935 38632181 -106957107 + AluSx SINE Alu 46 291 -21 487 200 148 7 chr10 38632189 38632344 -106956944 - MIR SINE MIR -21 241 65 2443 123 72 29 chr10 38632787 38633201 -106956087 + MSTB1 LTR MaLR 1 432 0 2260 151 29 39 chr10 38634005 38634382 -106954906 + MLT2D LTR ERVL 1 375 -39 333 0 0 0 chr10 38634382 38634419 -106954869 + (TG)n Simple_repeat Simple_repeat 2 38 0 2260 151 29 39 chr10 38634419 38634457 -106954831 + MLT2D LTR ERVL 375 412 -2 486 246 46 8 chr10 38634578 38634708 -106954580 + MER5B DNA MER1_type 1 135 -43 189 0 0 0 chr10 38635168 38635189 -106954099 + (A)n Simple_repeat Simple_repeat 1 21 0 189 0 0 0 chr10 38636712 38636733 -106952555 + (T)n Simple_repeat Simple_repeat 1 21 0 189 0 0 0 chr10 38636791 38636812 -106952476 + (TG)n Simple_repeat Simple_repeat 2 22 0 522 284 157 18 chr10 38636819 38637207 -106952081 + L1ME4a LINE L1 5678 6119 -2 198 315 101 0 chr10 38637319 38637408 -106951880 - L2 LINE L2 0 3272 3175 3200 119 0 39 chr10 38637559 38638095 -106951193 + L1PB1 LINE L1 5637 6151 0 959 277 53 13 chr10 38638504 38638880 -106950408 - L1MD2 LINE L1 -12 6347 5957 1397 105 0 0 chr10 38638958 38639139 -106950149 - AluSq SINE Alu -8 305 125 210 277 42 67 chr10 38639202 38639321 -106949967 - L2 LINE L2 -569 2745 2630 196 154 39 0 chr10 38639361 38639413 -106949875 + CT-rich Low_complexity Low_complexity 4 57 0 24 32 0 0 chr10 38640343 38640374 -106948914 + AT_rich Low_complexity Low_complexity 1 31 0 37625 34 1 1 chr10 38640400 38645929 -106943359 - L1PA4 LINE L1 -3 6152 623 693 69 0 0 chr10 38645927 38646014 -106943274 - L1PA4 LINE L1 -6048 98 12 * 387 41 0 0 chr10 38648088 38648137 -106941151 + (TG)n Simple_repeat Simple_repeat 1 49 0 27 0 0 0 chr10 38648387 38648414 -106940874 + AT_rich Low_complexity Low_complexity 1 27 0 2300 96 20 0 chr10 38648655 38648958 -106940330 - AluSx SINE Alu -3 309 1 2081 102 34 57 chr10 38649272 38649656 -106939632 + THE1C LTR MaLR 1 375 0 29 47 0 0 chr10 38650248 38650291 -106938997 + AT_rich Low_complexity Low_complexity 1 43 0 1732 162 46 15 chr10 38651430 38651757 -106937531 + MER1B DNA MER1_type 1 337 0 767 234 129 10 chr10 38652456 38652665 -106936623 - MIR SINE MIR 0 262 29 1385 175 6 127 chr10 38654121 38654459 -106934829 - AluJb SINE Alu -15 297 1 331 369 157 10 chr10 38654753 38654951 -106934337 + MIR SINE MIR 36 262 0 1513 234 151 41 chr10 38654959 38655468 -106933820 + MLT1F1 LTR MaLR 3 567 0 420 330 34 62 chr10 38655750 38656102 -106933186 + L2 LINE L2 2545 2886 -428 458 231 27 12 chr10 38656352 38656498 -106932790 + MLT1H LTR MaLR 412 547 -2 352 307 139 0 chr10 38656498 38656635 -106932653 + L2 LINE L2 2905 3060 -253 3584 225 48 23 chr10 38656667 38657166 -106932122 - MER21B LTR ERV1 -11 852 322 2140 127 10 0 chr10 38657166 38657473 -106931815 - AluSp SINE Alu -3 310 1 3584 225 48 23 chr10 38657473 38657804 -106931484 - MER21B LTR ERV1 -541 322 1 2234 112 3 0 chr10 38657967 38658263 -106931025 + AluSx SINE Alu 1 297 -15 351 349 89 19 chr10 38658351 38658666 -106930622 + L2 LINE L2 2641 2977 -337 2013 267 137 35 chr10 38658861 38660153 -106929135 - L2 LINE L2 -27 3286 1859 313 322 0 0 chr10 38660198 38660285 -106929003 + L2 LINE L2 3184 3270 -2 779 222 0 0 chr10 38661653 38661806 -106927482 - FRAM SINE Alu -22 154 2 1203 60 60 6 chr10 38661894 38662061 -106927227 + L1PA5 LINE L1 5979 6154 0 200 188 281 31 chr10 38663185 38663281 -106926007 - MIR SINE MIR -126 136 17 289 343 107 34 chr10 38663428 38663606 -106925682 - L2 LINE L2 -2 3270 3080 1249 107 0 37 chr10 38663663 38663850 -106925438 - AluSx SINE Alu -132 180 1 211 263 163 0 chr10 38664381 38664461 -106924827 + L2 LINE L2 3148 3240 -32 213 121 0 0 chr10 38664477 38664510 -106924778 + (T)n Simple_repeat Simple_repeat 1 33 0 302 301 41 32 chr10 38667221 38667344 -106921944 - L1MEd LINE L1 -4938 1181 1058 4971 106 23 1 chr10 38667351 38668123 -106921165 - L1PA11 LINE L1 -1 6173 5385 1078 250 71 38 chr10 38668330 38668722 -106920566 - L2 LINE L2 -754 2560 2156 474 146 117 58 chr10 38669903 38670006 -106919282 + AluJo SINE Alu 84 192 -120 665 157 0 0 chr10 38670205 38670307 -106918981 + AluJo SINE Alu 197 298 -14 557 282 46 5 chr10 38670917 38671133 -106918155 + LTR33 LTR ERVL 297 521 0 299 301 73 23 chr10 38672035 38672254 -106917034 + LTR33 LTR ERVL 230 459 -62 1522 96 18 9 chr10 38672690 38672908 -106916380 + AluSq SINE Alu 91 310 -3 24 91 0 0 chr10 38673034 38673100 -106916188 + AT_rich Low_complexity Low_complexity 1 66 0 2160 223 15 33 chr10 38673803 38674405 -106914883 - L1MB8 LINE L1 -1 6246 5656 727 186 41 71 chr10 38674405 38674694 -106914594 + MLT1A2 LTR MaLR 1 336 -38 9525 238 49 23 chr10 38674709 38678358 -106910930 - L1MB8 LINE L1 -587 5660 1956 2504 79 0 0 chr10 38678358 38678662 -106910626 - AluY SINE Alu -7 304 1 9525 238 49 23 chr10 38678662 38678745 -106910543 - L1MB8 LINE L1 -4291 1956 1877 781 296 47 0 chr10 38679060 38679357 -106909931 - L1MEc LINE L1 -4574 2564 2254 6372 80 20 6 chr10 38679360 38680473 -106908815 + L1PA13 LINE L1 5025 6152 -11 227 278 0 0 chr10 38680771 38680843 -106908445 - L1MEc LINE L1 -4846 2113 2042 1938 281 38 20 chr10 38680847 38681456 -106907832 - L1MEc LINE L1 -6233 626 7 291 317 0 0 chr10 38683006 38683088 -106906200 + (CATATA)n Simple_repeat Simple_repeat 4 85 0 767 234 129 10 chr10 38734071 38734280 -106855008 + MIR SINE MIR 29 262 0 1732 162 46 15 chr10 38734979 38735306 -106853982 - MER1B DNA MER1_type 0 337 1 29 47 0 0 chr10 38736445 38736488 -106852800 + AT_rich Low_complexity Low_complexity 1 43 0 225 160 60 0 chr10 38737084 38737134 -106852154 - THE1C LTR MaLR -4 392 340 1037 89 45 68 chr10 38737306 38737529 -106851759 - THE1C LTR MaLR -200 228 1 2300 96 20 0 chr10 38737843 38738146 -106851142 + AluSx SINE Alu 1 309 -3 27 0 0 0 chr10 38738387 38738414 -106850874 + AT_rich Low_complexity Low_complexity 1 27 0 387 41 0 0 chr10 38738664 38738713 -106850575 + (CA)n Simple_repeat Simple_repeat 1 49 0 224 57 0 29 chr10 38740426 38740461 -106848827 + (GGA)n Simple_repeat Simple_repeat 3 36 0 2164 122 0 7 chr10 38740511 38740814 -106848474 + AluSq SINE Alu 1 301 -12 530 306 93 29 chr10 38740821 38741380 -106847908 + L1ME3A LINE L1 4692 5286 -860 371 243 59 41 chr10 38741707 38741876 -106847412 + L1ME3A LINE L1 5780 5951 -219 1442 248 48 36 chr10 38742280 38742756 -106846532 + MER74B LTR ERVL 59 540 -82 1797 176 24 12 chr10 38743861 38744201 -106845087 + MER2 DNA MER2_type 1 344 0 232 136 15 15 chr10 38745021 38745087 -106844201 + A-rich Low_complexity Low_complexity 2 67 0 940 130 33 22 chr10 38746745 38746929 -106842359 - MER53 DNA DNA 0 189 4 614 288 25 0 chr10 38747140 38747300 -106841988 + MER5B DNA MER1_type 15 178 0 301 282 135 6 chr10 38749283 38749439 -106839849 + L1M4 LINE L1 1961 2136 -5327 266 127 127 73 chr10 38749473 38749583 -106839705 + L1M4 LINE L1 2286 2401 -5164 228 240 27 13 chr10 38749649 38749724 -106839564 + (TA)n Simple_repeat Simple_repeat 2 77 0 648 245 61 96 chr10 38749752 38750252 -106839036 + L1M4 LINE L1 2592 3071 -4675 1108 184 18 0 chr10 38750252 38750475 -106838813 - L1MA8 LINE L1 -3 6288 6062 648 245 61 96 chr10 38750475 38750545 -106838743 + L1M4 LINE L1 3071 3142 -4604 447 261 37 15 chr10 38750629 38750763 -106838525 + L2 LINE L2 3177 3313 0 25 0 0 0 chr10 38751718 38751743 -106837545 + AT_rich Low_complexity Low_complexity 1 25 0 31 26 0 0 chr10 38751876 38751914 -106837374 + AT_rich Low_complexity Low_complexity 1 38 0 198 103 0 0 chr10 38752661 38752690 -106836598 + (CA)n Simple_repeat Simple_repeat 2 30 0 185 236 55 0 chr10 38752884 38752939 -106836349 + MIR SINE MIR 159 216 -46 389 185 33 11 chr10 38753889 38753981 -106835307 - L1MA9 LINE L1 -28 6284 6191 30 45 0 0 chr10 38754586 38754630 -106834658 + AT_rich Low_complexity Low_complexity 1 44 0 2690 140 2 2 chr10 38755061 38755505 -106833783 + L1PB4 LINE L1 5346 5789 -367 336 202 0 26 chr10 38755505 38755619 -106833669 + (TA)n Simple_repeat Simple_repeat 1 111 0 2380 129 3 11 chr10 38755688 38756059 -106833229 + L1PB4 LINE L1 5776 6143 -13 45 19 0 0 chr10 38756076 38756128 -106833160 + AT_rich Low_complexity Low_complexity 1 52 0 2151 112 0 7 chr10 38756355 38756650 -106832638 - AluSg SINE Alu -17 293 1 235 288 107 12 chr10 38756696 38757019 -106832269 + L1ME LINE L1 5279 5632 -489 317 338 127 42 chr10 38757705 38757918 -106831370 + MLT1I LTR MaLR 104 334 -75 302 362 31 0 chr10 38758503 38758630 -106830658 - MIR SINE MIR -13 249 119 1100 148 21 93 chr10 38758651 38758978 -106830310 + MER96B DNA MER1_type? 46 349 -64 3906 144 61 14 chr10 38758978 38759684 -106829604 - L1MC1 LINE L1 0 6613 5875 2220 19 0 0 chr10 38759740 38759999 -106829289 - L1PA3 LINE L1 -3 6152 5894 876 172 30 10 chr10 38760006 38760209 -106829079 - L1MC1 LINE L1 -749 5875 5597 * 9247 209 53 14 chr10 38760199 38764158 -106825130 - L1MC1 LINE L1 -1329 5097 941 2399 64 0 3 chr10 38764158 38764454 -106824834 - AluY SINE Alu -16 295 1 9247 209 53 14 chr10 38764454 38764981 -106824307 - L1MC1 LINE L1 -5485 941 436 576 303 62 31 chr10 38765000 38765324 -106823964 + L1ME3A LINE L1 5313 5645 -519 631 223 99 20 chr10 38765414 38765615 -106823673 - MER2 DNA MER2_type 0 345 129 5411 129 103 11 chr10 38765615 38766598 -106822690 + Tigger3b DNA MER2_type 2 1074 -157 352 296 107 6 chr10 38766598 38766757 -106822531 + L1ME3A LINE L1 5763 5937 -233 307 265 99 63 chr10 38767056 38767279 -106822009 + HAL1 LINE L1 2064 2294 -213 225 227 80 0 chr10 38767282 38767357 -106821931 + HAL1 LINE L1 2322 2402 -105 1923 131 178 8 chr10 38767367 38767562 -106821726 - MSTA LTR MaLR -7 421 260 4471 97 5 3 chr10 38767562 38768183 -106821105 - L1PA10 LINE L1 -2 6166 5545 1923 131 178 8 chr10 38768183 38768347 -106820941 - MSTA LTR MaLR -168 260 1 21 57 0 0 chr10 38768430 38768465 -106820823 + AT_rich Low_complexity Low_complexity 1 35 0 182 229 243 0 chr10 38769552 38769622 -106819666 - MIR SINE MIR -1 261 175 329 279 29 88 chr10 38769629 38769765 -106819523 + MIR SINE MIR 114 241 -21 573 241 52 31 chr10 38769786 38769977 -106819311 + L2 LINE L2 2181 2375 -939 3153 140 15 39 chr10 38770025 38770454 -106818834 + MER1A DNA MER1_type 2 417 -2283 2085 117 0 37 chr10 38770454 38770778 -106818510 + AluSx SINE Alu 1 312 0 3153 140 15 39 chr10 38770778 38770885 -106818403 + MER1A DNA MER1_type 417 525 -2 831 253 4 56 chr10 38770930 38771179 -106818109 + MIR SINE MIR 25 260 -2 653 334 44 39 chr10 38771184 38771573 -106817715 + L2 LINE L2 2403 2793 -521 447 284 7 47 chr10 38771653 38771801 -106817487 + MIR SINE MIR 111 252 -10 605 336 50 69 chr10 38771815 38772294 -106816994 + L2 LINE L2 2827 3296 -17 2206 121 0 3 chr10 38774522 38774828 -106814460 + AluSc SINE Alu 4 308 -1 1247 220 178 48 chr10 38775840 38776300 -106812988 - MLT2B1 LTR ERVL 0 520 1 4754 216 105 31 chr10 38776674 38778581 -106810707 + L1MD3 LINE L1 4848 5403 -743 * 23363 180 23 17 chr10 38778575 38779309 -106809979 + L1PA11 LINE L1 1 729 -6883 1904 107 0 8 chr10 38779309 38779572 -106809716 - AluSx SINE Alu -16 296 36 23363 180 23 17 chr10 38779572 38785580 -106803708 + L1PA11 LINE L1 729 7611 -1 957 204 52 0 chr10 38785574 38785804 -106803484 + L1MC3 LINE L1 6857 7098 -687 * 259 299 46 0 chr10 38785807 38785894 -106803394 + MLT1F1 LTR MaLR 39 129 -438 2762 173 36 12 chr10 38785896 38786473 -106802815 + L1MC3 LINE L1 7194 7784 -1 375 363 86 25 chr10 38787016 38787294 -106801994 - L3b LINE CR1 -173 1410 1116 273 29 0 0 chr10 38788087 38788121 -106801167 + (TG)n Simple_repeat Simple_repeat 1 34 0 273 29 0 0 chr10 38788120 38788154 -106801134 + (GA)n Simple_repeat Simple_repeat 1 34 0 1658 159 11 22 chr10 38789246 38789523 -106799765 + AluJb SINE Alu 15 288 -24 506 312 73 14 chr10 38790447 38790665 -106798623 + MIR SINE MIR 32 262 0 799 196 17 39 chr10 38791334 38791513 -106797775 + FRAM SINE Alu 1 175 -1 203 184 0 0 chr10 38791563 38791601 -106797687 + (TA)n Simple_repeat Simple_repeat 2 39 0 377 69 0 17 chr10 38792307 38792365 -106796923 + (CA)n Simple_repeat Simple_repeat 2 58 0 799 253 115 59 chr10 38792666 38793223 -106796065 - MLT1G LTR MaLR -2 588 1 206 31 0 31 chr10 38793405 38793437 -106795851 + (TAAA)n Simple_repeat Simple_repeat 4 34 0 23 78 0 0 chr10 38794588 38794639 -106794649 + AT_rich Low_complexity Low_complexity 1 51 0 5826 191 164 40 chr10 38795463 38797024 -106792264 - MER52A LTR ERV1 0 1755 1 180 118 0 59 chr10 38797488 38797522 -106791766 - L2 LINE L2 -2085 1229 1198 193 365 46 51 chr10 38797831 38798264 -106791024 - L2 LINE L2 -422 2892 2462 2252 108 0 25 chr10 38800369 38800684 -106788604 - AluSq SINE Alu -6 307 1 6982 21 0 1 chr10 38800714 38801523 -106787765 + L1PA3 LINE L1 5345 6152 -3 23 0 0 0 chr10 38801813 38801836 -106787452 + AT_rich Low_complexity Low_complexity 1 23 0 1475 106 15 0 chr10 38802184 38802383 -106786905 + AluSg/x SINE Alu 108 309 -1 200 33 0 33 chr10 38802443 38802473 -106786815 + (TTTTG)n Simple_repeat Simple_repeat 3 31 0 1990 157 71 8 chr10 38802631 38803027 -106786261 + MSTA LTR MaLR 1 421 -7 21 0 0 0 chr10 38804405 38804426 -106784862 + AT_rich Low_complexity Low_complexity 1 21 0 2205 117 45 31 chr10 38804812 38805171 -106784117 + THE1B LTR MaLR 1 364 0 347 177 40 7 chr10 38806461 38806540 -106782748 - MIR SINE MIR -63 145 86 2100 175 24 5 chr10 38807836 38808253 -106781035 + L1MB1 LINE L1 5744 6168 0 311 279 195 19 chr10 38808264 38808418 -106780870 + MIR SINE MIR 41 221 -41 366 258 75 33 chr10 38809675 38809795 -106779493 + MIR3 SINE MIR 65 189 -19 331 193 307 0 chr10 38810900 38810988 -106778300 + MIR3 SINE MIR 81 195 -13 291 300 0 0 chr10 38812375 38812455 -106776833 + (TA)n Simple_repeat Simple_repeat 2 81 0 1938 281 38 20 chr10 38814005 38814614 -106774674 + L1MB8 LINE L1 7 626 -6233 227 278 0 0 chr10 38814618 38814690 -106774598 + L1MB8 LINE L1 2042 2113 -4846 6372 80 27 13 chr10 38814988 38816101 -106773187 - L1PA13 LINE L1 -11 6152 5025 781 296 47 0 chr10 38816104 38816401 -106772887 + L1MB8 LINE L1 2254 2564 -4574 9579 238 48 22 chr10 38816716 38816799 -106772489 + L1MB8 LINE L1 2619 2698 -4291 2504 79 0 0 chr10 38816799 38817103 -106772185 + AluY SINE Alu 1 304 -7 9579 238 48 22 chr10 38817103 38820752 -106768536 + L1MB8 LINE L1 2698 6402 -587 727 186 41 71 chr10 38820767 38821056 -106768232 - MLT1A2 LTR MaLR -38 336 1 2160 223 15 33 chr10 38821056 38821658 -106767630 + L1MB8 LINE L1 6398 6988 -1 24 91 0 0 chr10 38822362 38822428 -106766860 + AT_rich Low_complexity Low_complexity 1 66 0 1522 96 18 9 chr10 38822554 38822772 -106766516 - AluSq SINE Alu -3 310 91 300 320 64 14 chr10 38823208 38823427 -106765861 - LTR33 LTR ERVL -62 459 230 557 282 46 5 chr10 38824328 38824544 -106764744 - LTR33 LTR ERVL 0 521 297 716 147 0 0 chr10 38825148 38825257 -106764031 - AluJo SINE Alu -7 305 197 474 146 117 58 chr10 38825456 38825559 -106763729 - AluJo SINE Alu -120 192 84 1047 253 71 38 chr10 38826740 38827132 -106762156 + L2 LINE L2 2156 2560 -754 4971 106 23 1 chr10 38827339 38828111 -106761177 + L1PA11 LINE L1 5385 6173 -1 302 301 41 32 chr10 38828118 38828241 -106761047 + L1MEd LINE L1 1058 1181 -4938 213 121 0 0 chr10 38830952 38830985 -106758303 + (A)n Simple_repeat Simple_repeat 1 33 0 211 263 163 0 chr10 38831001 38831081 -106758207 - L2 LINE L2 -32 3240 3148 1249 107 0 37 chr10 38831612 38831799 -106757489 + AluSx SINE Alu 1 180 -132 289 343 107 34 chr10 38831856 38832034 -106757254 + L2 LINE L2 3080 3270 -2 200 188 281 31 chr10 38832181 38832277 -106757011 + MIR SINE MIR 17 136 -126 1203 60 60 6 chr10 38833401 38833568 -106755720 - L1PA5 LINE L1 0 6154 5979 779 222 0 0 chr10 38833656 38833809 -106755479 + FRAM SINE Alu 2 154 -22 313 322 0 0 chr10 38835177 38835264 -106754024 - L2 LINE L2 -2 3270 3184 2013 267 137 35 chr10 38835309 38836601 -106752687 + L2 LINE L2 1859 3286 -27 351 349 89 19 chr10 38836796 38837111 -106752177 - L2 LINE L2 -337 2977 2641 2234 112 3 0 chr10 38837199 38837495 -106751793 - AluSx SINE Alu -15 297 1 3583 226 48 24 chr10 38837658 38837989 -106751299 + MER21B LTR ERV1 1 323 -540 2266 114 10 0 chr10 38837989 38838296 -106750992 + AluSq SINE Alu 1 310 -3 3583 226 48 24 chr10 38838296 38838796 -106750492 + MER21B LTR ERV1 323 852 -11 352 307 139 0 chr10 38838828 38838965 -106750323 - L2 LINE L2 -253 3060 2905 491 234 30 14 chr10 38838965 38839121 -106750167 - MLT1H LTR MaLR -2 547 383 420 330 34 62 chr10 38839362 38839714 -106749574 - L2 LINE L2 -428 2886 2545 1565 244 139 30 chr10 38839996 38840505 -106748783 - MLT1F1 LTR MaLR 0 567 3 5232 152 31 44 chr10 38840841 38840945 -106748343 - L1PB1 LINE L1 -2 6149 6045 2867 0 0 0 chr10 38840945 38841251 -106748037 - AluYa5 SINE Alu -5 306 1 5232 152 31 44 chr10 38841251 38843157 -106746131 - L1PB1 LINE L1 -106 6045 4177 668 273 128 10 chr10 38843149 38843616 -106745672 + L1ME3A LINE L1 5401 5934 -255 * 204 111 0 0 chr10 38844493 38844529 -106744759 + (CA)n Simple_repeat Simple_repeat 1 36 0 338 0 24 0 chr10 38844992 38845034 -106744254 + (TTTTA)n Simple_repeat Simple_repeat 2 44 0 1946 132 21 0 chr10 38845037 38845317 -106743971 - AluSx SINE Alu -26 286 1 2335 67 7 0 chr10 38846521 38846805 -106742483 + AluY SINE Alu 6 291 -20 417 246 0 0 chr10 38846808 38846926 -106742362 + (TATATG)n Simple_repeat Simple_repeat 2 119 0 1766 193 22 14 chr10 38848116 38848484 -106740804 - L1PA16 LINE L1 -22 6144 5774 2124 98 0 4 chr10 38848716 38848993 -106740295 + AluY SINE Alu 1 276 -35 225 0 0 0 chr10 38848994 38849019 -106740269 + (TC)n Simple_repeat Simple_repeat 2 26 0 475 70 0 62 chr10 38849019 38849147 -106740141 + (TA)n Simple_repeat Simple_repeat 2 121 0 224 329 255 12 chr10 38849639 38849800 -106739488 + MIR SINE MIR 52 251 -11 241 338 0 0 chr10 38851021 38851092 -106738196 + MIR SINE MIR 115 185 -77 843 192 54 17 chr10 38851153 38851329 -106737959 - MIR SINE MIR -60 202 24 434 321 14 21 chr10 38851470 38851610 -106737678 + MIR3 SINE MIR 67 205 -3 199 321 127 0 chr10 38851652 38851786 -106737502 + L3b LINE CR1 1316 1466 -117 24 32 0 0 chr10 38852818 38852849 -106736439 + AT_rich Low_complexity Low_complexity 1 31 0 32 26 0 0 chr10 38854399 38854438 -106734850 + AT_rich Low_complexity Low_complexity 1 39 0 11599 140 27 13 chr10 38854448 38857630 -106731658 - L1MA1 LINE L1 0 7721 4493 6637 129 37 1 chr10 38857628 38858686 -106730602 - L1MA1 LINE L1 -4723 2842 1747 * 21 0 0 0 chr10 38858720 38858741 -106730547 + AT_rich Low_complexity Low_complexity 1 21 0 1386 118 80 38 chr10 38861445 38861683 -106727605 + Tigger2a DNA MER2_type 1 248 -186 864 271 24 0 chr10 38862076 38862286 -106727002 + MER58A DNA MER1_type 10 224 0 335 297 116 7 chr10 38862902 38863057 -106726231 + MIR SINE MIR 1 172 -90 3452 236 49 6 chr10 38865446 38866320 -106722968 + L1P LINE L1 1940 2851 -3295 2369 196 7 0 chr10 38866373 38866821 -106722467 + L1P LINE L1 3803 4253 -1893 258 288 12 0 chr10 38866822 38866902 -106722386 + L2 LINE L2 2527 2607 -707 217 329 205 48 chr10 38867009 38867380 -106721908 + L2 LINE L2 2867 3295 -18 1659 221 19 27 chr10 38867634 38868000 -106721288 - MLT1A2 LTR MaLR -11 363 1 242 344 48 40 chr10 38868699 38868824 -106720464 - MER5A DNA MER1_type -6 183 58 2082 129 0 3 chr10 38869165 38869467 -106719821 + AluSx SINE Alu 1 301 -11 360 323 40 25 chr10 38869493 38869784 -106719504 + L1ME LINE L1 2199 2457 -3758 2177 125 0 0 chr10 38869913 38870216 -106719072 - AluSq SINE Alu -10 303 1 2356 83 0 10 chr10 38870221 38870533 -106718755 - AluSg SINE Alu 0 310 2 2246 106 0 13 chr10 38871787 38872098 -106717190 - AluSx SINE Alu -5 307 1 287 265 173 33 chr10 38873223 38873559 -106715729 + L1ME LINE L1 5351 5733 -457 195 70 47 23 chr10 38873844 38873887 -106715401 + (TA)n Simple_repeat Simple_repeat 1 44 0 1043 213 7 79 chr10 38873887 38873979 -106715309 + MLT1B LTR MaLR 10 107 -283 1356 126 39 39 chr10 38873979 38874209 -106715079 - MER30 DNA MER1_type 0 230 1 1043 213 7 79 chr10 38874209 38874393 -106714895 + MLT1B LTR MaLR 107 266 -124 863 159 7 0 chr10 38874420 38874558 -106714730 + L1M4 LINE L1 5489 5627 -547 745 162 33 8 chr10 38874578 38874727 -106714561 + MLT1B LTR MaLR 275 389 -1 186 133 0 0 chr10 38874732 38874762 -106714526 + (TATG)n Simple_repeat Simple_repeat 2 31 0 1016 210 31 43 chr10 38874768 38875116 -106714172 - Tigger3(Golem) DNA MER2_type 0 3036 1 21 0 0 0 chr10 38875145 38875166 -106714122 + AT_rich Low_complexity Low_complexity 1 21 0 22 70 0 0 chr10 38875212 38875255 -106714033 + AT_rich Low_complexity Low_complexity 1 43 0 4623 191 21 19 chr10 38876358 38877423 -106711865 - L1MC2 LINE L1 -95 6249 5186 370 237 58 106 chr10 38877430 38877607 -106711681 - L1ME4a LINE L1 -2 6119 5964 1732 209 62 66 chr10 38877607 38878041 -106711247 + MLT1D LTR MaLR 5 438 -67 1859 183 0 0 chr10 38878041 38878353 -106710935 - AluJo SINE Alu 0 312 1 1732 209 62 66 chr10 38878353 38878421 -106710867 + MLT1D LTR MaLR 438 505 0 370 237 58 106 chr10 38878421 38878572 -106710716 - L1ME4a LINE L1 -157 5964 5807 2450 173 97 45 chr10 38879025 38879169 -106710119 + MLT1F1 LTR MaLR 1 136 -431 15750 33 7 2 chr10 38879169 38881866 -106707422 + L1PA4 LINE L1 3469 6155 0 2450 173 97 45 chr10 38881866 38882258 -106707030 + MLT1F1 LTR MaLR 136 565 -2 210 400 189 0 chr10 38882758 38882943 -106706345 + L2 LINE L2 2651 2870 -444 520 350 15 0 chr10 38883021 38883218 -106706070 + MIR SINE MIR 57 256 -6 237 366 117 25 chr10 38883245 38883526 -106705762 + L2 LINE L2 2966 3272 0 1517 177 0 0 chr10 38883701 38883938 -106705350 + AluJo SINE Alu 44 280 -32 689 273 67 38 chr10 38883977 38884292 -106704996 + HsTC2a DNA Tc2 1 324 -420 1094 304 112 22 chr10 38884307 38884688 -106704600 + L1MC4 LINE L1 7189 7535 -507 489 34 0 0 chr10 38884688 38884747 -106704541 + (CA)n Simple_repeat Simple_repeat 1 59 0 1094 304 112 22 chr10 38884747 38885127 -106704161 + L1MC4 LINE L1 7535 8018 -24 299 214 125 54 chr10 38885212 38885324 -106703964 + HsTC2a DNA Tc2 317 436 -306 1911 122 0 4 chr10 38885416 38885679 -106703609 - AluSc SINE Alu -47 262 1 406 206 237 10 chr10 38885760 38885842 -106703446 + HsTC2a DNA Tc2 505 567 -1331 251 53 0 26 chr10 38885842 38885880 -106703408 + (TAAAA)n Simple_repeat Simple_repeat 4 40 0 406 206 237 10 chr10 38885880 38885991 -106703297 + HsTC2a DNA Tc2 567 742 0 366 325 6 18 chr10 38886523 38886689 -106702599 + (CATATA)n Simple_repeat Simple_repeat 4 167 0 1917 165 9 6 chr10 38886833 38887236 -106702052 - L1MA9 LINE L1 -697 5615 5212 3542 168 34 10 chr10 38887240 38887918 -106701370 + L1MA9 LINE L1 5619 6312 0 766 205 40 0 chr10 38890388 38890539 -106698749 + MER45A DNA AcHobo 1 157 -21 1111 243 31 6 chr10 38892588 38892913 -106696375 + L1MB4 LINE L1 4810 5142 -1004 2584 82 0 6 chr10 38892914 38893266 -106696022 - THE1A LTR MaLR 0 355 6 3610 182 15 49 chr10 38893268 38893503 -106695785 + L1MB4 LINE L1 5141 5382 -798 663 218 0 15 chr10 38893503 38893636 -106695652 + FLAM_A SINE Alu 1 131 -2 3610 182 15 49 chr10 38893636 38894359 -106694929 + L1MB4 LINE L1 5382 6068 -112 285 264 18 73 chr10 38896484 38896594 -106692694 - MIR SINE MIR -5 257 154 1064 245 162 35 chr10 38896599 38897080 -106692208 - MLT1H LTR MaLR -5 544 3 237 244 0 0 chr10 38897083 38897128 -106692160 - MIR SINE MIR -105 157 113 210 309 16 98 chr10 38897842 38898036 -106691252 + MIR SINE MIR 72 249 -13 322 243 53 66 chr10 38898447 38898599 -106690689 + L1MB8 LINE L1 6029 6178 0 291 140 0 0 chr10 38898635 38898685 -106690603 + (TC)n Simple_repeat Simple_repeat 1 50 0 1130 149 0 0 chr10 38898687 38898848 -106690440 - AluJb SINE Alu -15 297 137 21 82 0 0 chr10 38899240 38899289 -106689999 + AT_rich Low_complexity Low_complexity 1 49 0 379 296 9 0 chr10 38900938 38901053 -106688235 - MER94 DNA DNA 0 134 19 558 255 39 25 chr10 38901272 38901445 -106687843 + MIR SINE MIR 16 191 -69 456 262 118 16 chr10 38901652 38901839 -106687449 - MLT1L LTR MaLR -210 405 200 21 36 0 0 chr10 38902391 38902419 -106686869 + AT_rich Low_complexity Low_complexity 1 28 0 297 0 0 0 chr10 38903582 38903615 -106685673 + (T)n Simple_repeat Simple_repeat 1 33 0 202 283 98 22 chr10 38904047 38904139 -106685149 - MIR3 SINE MIR -5 203 105 180 373 0 0 chr10 38904383 38904442 -106684846 + L2 LINE L2 3241 3299 -14 413 278 71 114 chr10 38904906 38905161 -106684127 + MIR SINE MIR 10 253 -9 881 175 0 0 chr10 38907267 38907393 -106681895 + FLAM_C SINE Alu 1 126 -17 23 33 0 0 chr10 38907393 38907423 -106681865 + AT_rich Low_complexity Low_complexity 1 30 0 253 259 0 0 chr10 38907590 38907648 -106681640 - L2 LINE L2 0 3313 3256 480 206 62 0 chr10 38908041 38908138 -106681150 - MER5A DNA MER1_type -83 106 4 332 224 28 47 chr10 38908180 38908287 -106681001 + L1MC4 LINE L1 6598 6702 -1340 223 85 43 0 chr10 38908294 38908341 -106680947 + (TA)n Simple_repeat Simple_repeat 1 49 0 882 280 91 26 chr10 38908718 38909214 -106680074 + L1MEd LINE L1 499 1026 -5093 574 313 14 10 chr10 38909504 38909712 -106679576 - MIR SINE MIR -13 249 41 257 329 112 0 chr10 38910315 38910458 -106678830 + L2 LINE L2 2543 2701 -613 5275 158 26 2 chr10 38910466 38911434 -106677854 - L1MC1 LINE L1 -5 6328 5338 429 326 139 0 chr10 38911452 38911667 -106677621 + L2 LINE L2 2691 2935 -379 232 268 113 52 chr10 38911676 38911773 -106677515 - MER96 DNA MER1_type? -24 151 49 413 187 121 0 chr10 38911774 38911865 -106677423 + MER96 DNA MER1_type? 25 126 -49 556 79 13 0 chr10 38911865 38911941 -106677347 + MADE1 DNA Mariner 1 77 -3 243 183 0 0 chr10 38912808 38912855 -106676433 + (TG)n Simple_repeat Simple_repeat 2 51 -10 3999 172 65 22 chr10 38912855 38913682 -106675606 - MER21B LTR ERV1 0 863 1 243 183 0 0 chr10 38913682 38913694 -106675594 + (TG)n Simple_repeat Simple_repeat 50 61 0 449 125 0 0 chr10 38913776 38913840 -106675448 + AluS SINE Alu 1 64 -249 4147 91 0 13 chr10 38913842 38914467 -106674821 + L1P LINE L1 4655 5271 -875 1671 211 71 21 chr10 38914488 38914923 -106674365 + LTR2B LTR ERV1 34 490 0 6817 60 10 0 chr10 38914923 38915793 -106673495 + L1PA7 LINE L1 5268 6146 -8 1785 207 29 25 chr10 38915898 38916225 -106673063 - L1MD2 LINE L1 -8 6351 6020 1942 205 32 52 chr10 38916225 38916782 -106672506 - LTR55 LTR ERV -2 546 1 1785 207 29 25 chr10 38916782 38916898 -106672390 - L1MD2 LINE L1 -339 6020 5906 1031 189 16 21 chr10 38916901 38917092 -106672196 - AluJo SINE Alu -36 276 87 1890 213 14 50 chr10 38917095 38917315 -106671973 - L1MD2 LINE L1 -337 5905 5679 2245 106 3 0 chr10 38917315 38917616 -106671672 + AluY SINE Alu 1 302 -9 1890 213 14 50 chr10 38917616 38917878 -106671410 - L1MD2 LINE L1 -563 5679 5440 7205 215 47 39 chr10 38917893 38919108 -106670180 - L1MC1 LINE L1 -6 6327 5124 1555 92 10 10 chr10 38919108 38919315 -106669973 + AluSc SINE Alu 84 290 -19 7205 215 47 39 chr10 38919315 38919911 -106669377 - L1MC1 LINE L1 -1209 5124 4534 2326 98 3 0 chr10 38919911 38920217 -106669071 - AluSg SINE Alu -3 307 1 7205 215 47 39 chr10 38920217 38922172 -106667116 - L1MC1 LINE L1 -1799 4534 2530 242 56 28 0 chr10 38923093 38923129 -106666159 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 2017 101 0 35 chr10 38923132 38923419 -106665869 - AluSc SINE Alu -32 277 1 194 418 0 0 chr10 38923813 38923880 -106665408 - L2 LINE L2 -73 3199 3133 245 365 131 27 chr10 38923971 38924614 -106664674 - L2 LINE L2 -219 3053 2348 201 147 0 0 chr10 38924904 38924938 -106664350 + (TTTTC)n Simple_repeat Simple_repeat 5 38 0 204 182 0 102 chr10 38924952 38925040 -106664248 + T-rich Low_complexity Low_complexity 4 82 0 368 295 33 87 chr10 38925695 38925936 -106663352 + MIR SINE MIR 35 262 0 321 317 137 0 chr10 38925926 38926109 -106663179 - MIR SINE MIR -6 256 49 * 254 241 58 35 chr10 38926983 38927070 -106662218 + MIR SINE MIR 23 111 -151 825 122 0 0 chr10 38927087 38927202 -106662086 - AluSx SINE Alu -2 308 194 1105 95 0 7 chr10 38927203 38927350 -106661938 - AluSx SINE Alu -166 146 1 242 253 63 0 chr10 38928134 38928213 -106661075 + MER58 DNA MER1_type 7 90 -251 1653 93 9 0 chr10 38929312 38929528 -106659760 - AluSp SINE Alu -12 301 84 235 338 133 27 chr10 38930613 38930876 -106658412 + L2 LINE L2 2497 2787 -527 286 318 62 82 chr10 38931039 38931394 -106657894 + L2 LINE L2 2923 3270 -2 548 239 210 0 chr10 38931710 38931877 -106657411 + L2 LINE L2 3111 3312 -1 22 35 0 0 chr10 38931980 38932009 -106657279 + AT_rich Low_complexity Low_complexity 1 29 0 1929 113 0 77 chr10 38932062 38932373 -106656915 - AluY SINE Alu -24 287 1 231 270 61 35 chr10 38932624 38932739 -106656549 - LTR33 LTR ERVL 0 521 404 332 347 56 7 chr10 38932753 38932897 -106656391 + MIR SINE MIR 2 152 -110 313 267 48 9 chr10 38933002 38933107 -106656181 + MIR SINE MIR 148 256 -6 218 250 0 18 chr10 38933112 38933168 -106656120 + (TTA)n Simple_repeat Simple_repeat 2 56 0 1477 314 49 16 chr10 38933196 38934283 -106655005 - L1 LINE L1 -1717 4429 3280 300 48 0 0 chr10 38934285 38934327 -106654961 - AluSp/q SINE Alu -10 293 252 241 285 108 38 chr10 38934353 38934511 -106654777 - MLT1C LTR MaLR -79 388 220 21 0 0 0 chr10 38934831 38934852 -106654436 + AT_rich Low_complexity Low_complexity 1 21 0 2098 78 7 18 chr10 38935094 38935398 -106653890 - AluY SINE Alu 0 301 1 2222 120 3 0 chr10 38935712 38936020 -106653268 - AluSp SINE Alu -4 309 1 327 312 12 42 chr10 38936196 38936439 -106652849 - L1MDa LINE L1 -910 1580 1239 579 209 0 0 chr10 38936453 38936558 -106652730 - FLAM_A SINE Alu -13 129 25 412 329 20 14 chr10 38936664 38936810 -106652478 - L1MDa LINE L1 -5031 1088 942 274 206 59 10 chr10 38936821 38936923 -106652365 + (TA)n Simple_repeat Simple_repeat 2 108 0 244 214 54 0 chr10 38936978 38937034 -106652254 - MLT1G1 LTR MaLR -72 523 465 533 269 68 29 chr10 38937042 38937312 -106651976 - MLT1G1 LTR MaLR -279 316 11 439 387 29 40 chr10 38938864 38939213 -106650075 + L2 LINE L2 2435 2779 -535 187 292 125 61 chr10 38939524 38939669 -106649619 - MIR3 SINE MIR -50 158 4 701 305 45 27 chr10 38939719 38940042 -106649246 - LTR16A LTR ERVL 0 457 127 424 270 40 31 chr10 38940482 38940704 -106648584 - L1MEc LINE L1 -4646 1750 1527 253 294 20 20 chr10 38940712 38940814 -106648474 - LTR16A LTR ERVL -318 132 31 1303 190 3 100 chr10 38941978 38942309 -106646979 + AluJo SINE Alu 1 299 -13 272 331 73 20 chr10 38942943 38943094 -106646194 + L2 LINE L2 2926 3084 -188 295 292 132 28 chr10 38943435 38943579 -106645709 + MIR3 SINE MIR 34 192 -16 2097 99 9 49 chr10 38944015 38944397 -106644891 - AluSx SINE Alu 0 369 1 21 36 0 0 chr10 38944446 38944474 -106644814 + AT_rich Low_complexity Low_complexity 1 28 0 279 236 27 27 chr10 38944592 38944702 -106644586 + CT-rich Low_complexity Low_complexity 3 112 0 487 368 53 10 chr10 38945442 38945746 -106643542 - L1MC4a LINE L1 -1906 5902 5586 3443 254 83 35 chr10 38945746 38948487 -106640801 + L1MB1 LINE L1 6 2277 -3693 288 219 14 14 chr10 38948510 38948583 -106640705 + Tigger5 DNA MER2_type 2251 2323 0 403 219 12 0 chr10 38948638 38948720 -106640568 + Tigger5 DNA MER2_type 2238 2320 -3 10188 203 49 53 chr10 38948721 38949301 -106639987 + L1MB1 LINE L1 2272 2853 -3139 658 235 0 0 chr10 38949301 38949416 -106639872 + FLAM_A SINE Alu 5 119 -14 522 31 0 0 chr10 38949416 38949480 -106639808 + (CA)n Simple_repeat Simple_repeat 2 65 0 10188 203 49 53 chr10 38949480 38950056 -106639232 + L1MB1 LINE L1 2852 3429 -2563 2160 55 7 58 chr10 38950056 38950365 -106638923 + AluY SINE Alu 1 293 -18 10188 203 49 53 chr10 38950365 38950526 -106638762 + L1MB1 LINE L1 3429 3589 -2403 2629 93 8 8 chr10 38950526 38950901 -106638387 - THE1C LTR MaLR 0 375 1 10188 203 49 53 chr10 38950901 38951480 -106637808 + L1MB1 LINE L1 3589 4169 -1823 444 84 127 0 chr10 38951480 38951551 -106637737 - MADE1 DNA Mariner 0 80 1 10188 203 49 53 chr10 38951551 38952671 -106636617 + L1MB1 LINE L1 4169 5268 -724 368 132 0 38 chr10 38952671 38952777 -106636511 + (TTATA)n Simple_repeat Simple_repeat 5 106 0 3687 162 23 4 chr10 38952795 38953532 -106635756 + L1MB1 LINE L1 5267 6016 0 816 153 8 0 chr10 38955470 38955601 -106633687 + FLAM_A SINE Alu 1 132 -1 737 246 18 1 chr10 38955748 38955800 -106633488 + MER58 DNA MER1_type 1 51 -2369 203 0 0 36 chr10 38955800 38955828 -106633460 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 737 246 18 1 chr10 38955828 38956068 -106633220 + MER58 DNA MER1_type 51 2418 -2 4832 187 80 62 chr10 38956505 38957627 -106631661 + Charlie1a DNA MER1_type 7 1160 -1601 1801 70 0 0 chr10 38957627 38957856 -106631432 + AluY SINE Alu 1 229 -82 4832 187 80 62 chr10 38957856 38958108 -106631180 + Charlie1a DNA MER1_type 1160 1406 -49 4550 150 11 5 chr10 38958114 38959647 -106629641 - L1PA13 LINE L1 -2 6161 4536 7871 163 10 6 chr10 38959647 38960226 -106629062 + L1P LINE L1 3107 3682 -2464 210 71 0 0 chr10 38960226 38960254 -106629034 + (CAA)n Simple_repeat Simple_repeat 3 30 0 7871 163 10 6 chr10 38960254 38961051 -106628237 + L1P LINE L1 3682 4489 -1657 1082 77 0 0 chr10 38961307 38961462 -106627826 + L1PB4 LINE L1 4357 4511 -1635 5231 132 23 0 chr10 38961473 38961485 -106627803 + L1PB4 LINE L1 5176 5186 -970 2277 116 0 0 chr10 38961485 38961787 -106627501 + AluSg SINE Alu 1 302 -8 5231 132 23 0 chr10 38961787 38962737 -106626551 + L1PB4 LINE L1 5186 6155 -1 1087 160 11 0 chr10 38963130 38963311 -106625977 + AluSg/x SINE Alu 129 311 -1 21 36 0 0 chr10 38963858 38963886 -106625402 + AT_rich Low_complexity Low_complexity 1 28 0 23 54 0 0 chr10 38965182 38965219 -106624069 + AT_rich Low_complexity Low_complexity 1 37 0 266 148 19 0 chr10 38965712 38965766 -106623522 + CT-rich Low_complexity Low_complexity 1 55 0 * 674 210 0 22 chr10 38965760 38965941 -106623347 + C-rich Low_complexity Low_complexity 2 178 0 24 67 0 0 chr10 38966186 38966231 -106623057 + AT_rich Low_complexity Low_complexity 1 45 0 216 67 0 0 chr10 38966853 38966883 -106622405 + (GA)n Simple_repeat Simple_repeat 2 31 0 339 311 11 0 chr10 38967926 38968031 -106621257 - MIR SINE MIR -82 126 20 2339 94 3 0 chr10 38968058 38968366 -106620922 - AluSp SINE Alu -4 309 1 461 319 62 0 chr10 38969002 38969228 -106620060 - HAL1 LINE L1 -856 1651 1412 220 366 93 21 chr10 38969620 38970137 -106619151 + L2 LINE L2 1260 1813 -1501 237 111 61 30 chr10 38970137 38970236 -106619052 + (TA)n Simple_repeat Simple_repeat 1 102 0 527 312 80 35 chr10 38970262 38970637 -106618651 - L1MC4a LINE L1 -1916 5892 5501 738 318 86 46 chr10 38970652 38971365 -106617923 + L2 LINE L2 2033 2773 -541 419 375 113 17 chr10 38971445 38971736 -106617552 + L2 LINE L2 2936 3254 -18 327 305 42 24 chr10 38972305 38972472 -106616816 - MIR SINE MIR -56 206 37 837 289 22 4 chr10 38972974 38973202 -106616086 + MIR SINE MIR 3 234 -28 1569 137 50 8 chr10 38973253 38973515 -106615773 + MER46B DNA MER2_type 1 148 -88 1929 184 9 0 chr10 38973519 38973861 -106615427 + MER7A DNA MER2_type 2 344 -2 288 170 0 0 chr10 38973867 38973920 -106615368 + (CA)n Simple_repeat Simple_repeat 2 54 0 558 211 18 0 chr10 38973924 38974038 -106615250 + Tigger3(Golem) DNA MER2_type 2912 3027 -2 475 113 75 0 chr10 38974041 38974121 -106615167 + MER46B DNA MER2_type 151 236 0 299 238 200 0 chr10 38975795 38975875 -106613413 + MER5A DNA MER1_type 17 112 -77 314 169 31 31 chr10 38975906 38975971 -106613317 + L2 LINE L2 3238 3302 -11 21 0 0 0 chr10 38977014 38977035 -106612253 + AT_rich Low_complexity Low_complexity 1 21 0 2178 116 0 0 chr10 38977113 38977406 -106611882 + AluSp SINE Alu 1 293 -20 2495 181 3 4 chr10 38977501 38978035 -106611253 - L1P LINE L1 -733 5428 4895 4694 124 6 11 chr10 38978036 38978762 -106610526 + L1PA15 LINE L1 5438 6159 -6 753 188 117 132 chr10 38978767 38979176 -106610112 - MER57A LTR ERV1 0 403 1 27 29 0 0 chr10 38979469 38979503 -106609785 + AT_rich Low_complexity Low_complexity 1 34 0 1390 179 33 100 chr10 38979815 38980206 -106609082 + MLT1A1 LTR MaLR 1 365 0 448 352 36 28 chr10 38980219 38980466 -106608822 - MIR SINE MIR -12 250 2 220 380 94 69 chr10 38980654 38980972 -106608316 - L2 LINE L2 -10 3262 2937 992 223 18 108 chr10 38981418 38981817 -106607471 - MLT1A1 LTR MaLR 0 365 3 24 53 0 0 chr10 38981897 38981935 -106607353 + AT_rich Low_complexity Low_complexity 1 38 0 428 328 78 15 chr10 38981935 38982139 -106607149 - MIR SINE MIR 0 262 46 484 42 14 14 chr10 38984243 38984315 -106604973 + (TCTA)n Simple_repeat Simple_repeat 3 74 0 296 280 50 60 chr10 38984612 38984812 -106604476 + HAL1 LINE L1 9 206 -2301 383 342 74 10 chr10 38985319 38985521 -106603767 + HAL1 LINE L1 738 952 -1555 315 161 0 0 chr10 38985523 38985579 -106603709 + GA-rich Low_complexity Low_complexity 1 56 0 1276 173 79 0 chr10 38985609 38985863 -106603425 - L1M3 LINE L1 -538 5630 5357 1061 292 81 29 chr10 38985944 38986537 -106602751 + HAL1 LINE L1 1087 1710 -797 342 234 122 20 chr10 38986542 38986739 -106602549 + L1ME2 LINE L1 2983 3199 -2947 22 70 0 0 chr10 38986788 38986831 -106602457 + AT_rich Low_complexity Low_complexity 1 43 0 301 246 35 26 chr10 38986890 38987004 -106602284 + L1ME2 LINE L1 3426 3540 -2606 497 274 147 81 chr10 38987080 38987515 -106601773 - MLT1H1 LTR MaLR 0 550 86 3890 253 86 22 chr10 38987587 38989873 -106599415 + L1ME2 LINE L1 3656 6079 -85 522 283 103 25 chr10 38990002 38990342 -106598946 + MLT1G LTR MaLR 180 584 -6 238 162 0 0 chr10 38991125 38991162 -106598126 + Alu SINE Alu 84 120 -182 2331 135 0 0 chr10 38992657 38992997 -106596291 + L1PA8A LINE L1 4 343 -5532 7281 114 20 2 chr10 38992997 38994850 -106594438 + L1PA8A LINE L1 4553 6426 -20 216 0 0 0 chr10 38994850 38994874 -106594414 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 7281 114 20 2 chr10 38994874 38994896 -106594392 + L1PA8A LINE L1 6426 6446 0 545 271 39 30 chr10 38995089 38995292 -106593996 - MIR SINE MIR -5 257 53 610 193 6 28 chr10 38995542 38995723 -106593565 + GA-rich Low_complexity Low_complexity 3 179 0 23 33 0 0 chr10 38996799 38996829 -106592459 + AT_rich Low_complexity Low_complexity 1 30 0 2042 78 88 7 chr10 39000700 39000983 -106588305 + AluY SINE Alu 1 306 -5 22 0 0 0 chr10 39002875 39002897 -106586391 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr10 39003448 39003479 -106585809 + AT_rich Low_complexity Low_complexity 1 31 0 2108 200 21 34 chr10 39003594 39004125 -106585163 - L1MA8 LINE L1 -22 7688 7165 * 2260 147 50 28 chr10 39004093 39004557 -106584731 - L1MA8 LINE L1 -935 6630 6157 * 2287 230 58 34 chr10 39004554 39004845 -106584443 - L1MA8 LINE L1 -3710 3855 3573 1471 124 0 0 chr10 39004845 39005046 -106584242 - AluSg/x SINE Alu -19 293 93 2287 230 58 34 chr10 39005046 39005797 -106583491 - L1MA8 LINE L1 -3992 3573 2781 415 288 22 0 chr10 39005800 39005950 -106583338 - L1M3d LINE L1 -4518 2509 2357 * 19761 166 28 27 chr10 39005947 39009386 -106579902 - L1MA3 LINE L1 -4 7720 4286 1994 98 4 7 chr10 39009386 39009660 -106579628 - AluSc SINE Alu -36 273 1 19761 166 28 27 chr10 39009660 39010867 -106578421 - L1MA3 LINE L1 -3438 4286 3082 2188 120 0 3 chr10 39010867 39011167 -106578121 + AluSx SINE Alu 3 301 -11 19761 166 28 27 chr10 39011167 39012095 -106577193 - L1MA3 LINE L1 -4642 3082 2156 3533 139 40 11 chr10 39012095 39012722 -106576566 - L1MA4 LINE L1 -3 6297 5653 4157 37 0 0 chr10 39012723 39013215 -106576073 - L1PA3 LINE L1 -1 6154 5663 19761 166 28 27 chr10 39013215 39013660 -106575628 - L1MA3 LINE L1 -5568 2156 1713 186 43 0 0 chr10 39013660 39013683 -106575605 + (TC)n Simple_repeat Simple_repeat 2 24 0 19761 166 28 27 chr10 39013683 39015355 -106573933 - L1MA3 LINE L1 -6011 1713 14 1707 256 54 68 chr10 39015378 39016397 -106572891 - L1M3d LINE L1 -4828 2209 7 768 232 163 11 chr10 39017439 39017629 -106571659 - MER58A DNA MER1_type -5 219 1 210 277 40 59 chr10 39017718 39017819 -106571469 - MIR SINE MIR 0 262 164 2164 124 19 35 chr10 39017863 39018233 -106571055 - THE1B LTR MaLR 0 364 1 1121 221 43 50 chr10 39018264 39018567 -106570721 - AluJo SINE Alu -1 301 1 1621 168 10 49 chr10 39018761 39019065 -106570223 + AluJb SINE Alu 1 292 -20 21 0 0 0 chr10 39019658 39019679 -106569609 + AT_rich Low_complexity Low_complexity 1 21 0 233 263 105 0 chr10 39023025 39023101 -106566187 - L2 LINE L2 -2 3270 3187 198 0 0 0 chr10 39023267 39023289 -106565999 + (TG)n Simple_repeat Simple_repeat 2 23 0 24 0 0 0 chr10 39024340 39024364 -106564924 + AT_rich Low_complexity Low_complexity 1 24 0 794 332 84 17 chr10 39024683 39025214 -106564074 - L2 LINE L2 0 3313 2749 612 299 49 0 chr10 39025237 39025401 -106563887 - MER58A DNA MER1_type -12 212 41 351 299 39 24 chr10 39025407 39025534 -106563754 + L1M3c LINE L1 176 304 -6009 2417 237 45 78 chr10 39025861 39026529 -106562759 + L1M3c LINE L1 803 1301 -5034 2111 110 10 10 chr10 39026529 39026830 -106562458 + AluSq SINE Alu 1 301 -12 2417 237 45 78 chr10 39026830 39027309 -106561979 + L1M3c LINE L1 1301 1794 -4541 376 240 0 1 chr10 39027325 39027418 -106561870 - MER33 DNA MER1_type -250 74 1 258 363 67 7 chr10 39027618 39027753 -106561535 - MIR SINE MIR -119 143 1 4727 222 53 30 chr10 39027783 39029205 -106560083 + Charlie1a DNA MER1_type 1 1455 0 193 383 12 0 chr10 39029613 39029694 -106559594 - L2 LINE L2 -5 3267 3186 23 33 0 0 chr10 39030745 39030775 -106558513 + AT_rich Low_complexity Low_complexity 1 30 0 288 302 107 39 chr10 39032272 39032413 -106556875 + MIR3 SINE MIR 79 205 -3 249 33 0 0 chr10 39032961 39032991 -106556297 + (TTTTA)n Simple_repeat Simple_repeat 2 31 0 1455 173 44 4 chr10 39032994 39033242 -106556046 - AluJo SINE Alu -31 281 24 252 86 0 0 chr10 39033290 39033325 -106555963 + (TG)n Simple_repeat Simple_repeat 2 36 0 205 284 25 25 chr10 39033343 39033424 -106555864 - MIR SINE MIR -136 126 46 263 279 85 79 chr10 39033814 39033979 -106555309 + L2 LINE L2 1731 1896 -1418 464 239 229 9 chr10 39034139 39034357 -106554931 - MLT1I LTR MaLR -52 357 92 515 198 10 0 chr10 39034815 39034916 -106554372 + MIR SINE MIR 124 225 -37 23 54 0 0 chr10 39035002 39035039 -106554249 + AT_rich Low_complexity Low_complexity 1 37 0 381 333 47 12 chr10 39035107 39035278 -106554010 - MIR3 SINE MIR -11 197 21 3031 65 0 2 chr10 39036240 39036643 -106552645 + L1P LINE L1 4482 4883 -1263 249 149 64 0 chr10 39036639 39036686 -106552602 - L1ME LINE L1 -296 5939 5890 * 1251 246 157 18 chr10 39036691 39037142 -106552146 - LTR40a LTR ERVL -5 514 1 4372 248 54 48 chr10 39037147 39037642 -106551646 - L1ME LINE L1 -346 5889 5398 1562 164 15 15 chr10 39037642 39037916 -106551372 - AluJo SINE Alu 0 312 39 4372 248 54 48 chr10 39037916 39037949 -106551339 - L1ME LINE L1 -837 5398 5367 1349 191 83 92 chr10 39037949 39038419 -106550869 + MER31B LTR ERV1 1 466 0 4372 248 54 48 chr10 39038419 39038588 -106550700 - L1ME LINE L1 -868 5367 5201 2064 135 0 7 chr10 39038588 39038892 -106550396 - AluSx SINE Alu -10 302 1 4372 248 54 48 chr10 39038892 39039197 -106550091 - L1ME LINE L1 -1034 5201 4899 5079 116 60 18 chr10 39039197 39040533 -106548755 + L1PA15 LINE L1 4784 6158 -7 4372 248 54 48 chr10 39040533 39041764 -106547524 - L1ME LINE L1 -1336 4899 3640 2174 95 10 10 chr10 39041764 39042068 -106547220 - AluY SINE Alu -7 304 1 4372 248 54 48 chr10 39042068 39042168 -106547120 - L1ME LINE L1 -2595 3640 3542 587 300 86 16 chr10 39042290 39042730 -106546558 - L1ME LINE L1 -5350 1046 576 321 268 206 19 chr10 39042861 39043070 -106546218 - L1ME LINE L1 -6013 383 136 1624 202 50 64 chr10 39043090 39043590 -106545698 - MER82 DNA MER2_type 0 653 161 360 0 0 0 chr10 39044182 39044222 -106545066 + (TG)n Simple_repeat Simple_repeat 2 41 0 327 49 0 0 chr10 39044482 39044523 -106544765 + (TC)n Simple_repeat Simple_repeat 1 41 0 253 356 153 0 chr10 39046389 39046552 -106542736 - L3 LINE CR1 -114 1463 1276 26 30 0 0 chr10 39046561 39046594 -106542694 + AT_rich Low_complexity Low_complexity 1 33 0 585 219 0 0 chr10 39046595 39046718 -106542570 - MLT1A1 LTR MaLR -1 364 242 570 146 10 0 chr10 39046710 39046806 -106542482 - MLT1A1 LTR MaLR -236 129 33 * 360 323 111 5 chr10 39046814 39047012 -106542276 + L2 LINE L2 2234 2452 -862 1859 141 0 14 chr10 39047027 39047317 -106541971 - AluSx SINE Alu -26 286 1 255 287 82 49 chr10 39047433 39047555 -106541733 + L2 LINE L2 3179 3304 -9 198 118 0 0 chr10 39048723 39048757 -106540531 + (CA)n Simple_repeat Simple_repeat 1 34 0 785 272 26 0 chr10 39049500 39049695 -106539593 + MER63A DNA MER1_type 10 209 -1 2627 42 0 0 chr10 39049926 39050237 -106539051 + AluY SINE Alu 1 311 0 207 0 0 0 chr10 39050436 39050459 -106538829 + (A)n Simple_repeat Simple_repeat 1 23 0 2156 122 0 3 chr10 39052361 39052655 -106536633 - AluSg SINE Alu -17 293 1 835 269 72 54 chr10 39052667 39053083 -106536205 - L1MEc LINE L1 -4543 1853 1446 1898 151 34 0 chr10 39053083 39053205 -106536083 + AluSx SINE Alu 1 117 -195 387 0 0 0 chr10 39053205 39053248 -106536040 + (CA)n Simple_repeat Simple_repeat 2 44 0 1898 151 34 0 chr10 39053248 39053417 -106535871 + AluSx SINE Alu 117 302 -10 835 269 72 54 chr10 39053417 39053957 -106535331 - L1MEc LINE L1 -4950 1446 880 1595 114 160 8 chr10 39054178 39054440 -106534848 + AluSg1 SINE Alu 1 302 -7 320 326 42 26 chr10 39054635 39054828 -106534460 - L1MEc LINE L1 -6061 335 140 39 60 0 0 chr10 39055041 39055108 -106534180 + AT_rich Low_complexity Low_complexity 1 67 0 1757 15 0 0 chr10 39055153 39055349 -106533939 - AluYb8 SINE Alu -5 313 118 1360 205 18 21 chr10 39055993 39056276 -106533012 - AluJo SINE Alu -30 282 1 2618 38 0 13 chr10 39056833 39057148 -106532140 + AluY SINE Alu 1 311 0 225 0 0 0 chr10 39057344 39057369 -106531919 + (A)n Simple_repeat Simple_repeat 1 25 0 1218 280 129 35 chr10 39060786 39061586 -106527702 - L1ME3A LINE L1 -14 6156 5282 429 280 194 11 chr10 39063474 39063649 -106525639 + MIR SINE MIR 24 230 -32 255 300 83 17 chr10 39063843 39063963 -106525325 - MIR3 SINE MIR -37 171 44 1743 189 41 15 chr10 39064498 39064762 -106524526 - MER7A DNA MER2_type -2692 346 72 2293 87 0 3 chr10 39064762 39065060 -106524228 + AluY SINE Alu 1 297 -14 1743 189 41 15 chr10 39065060 39065134 -106524154 - MER7A DNA MER2_type -2966 72 1 3489 165 16 39 chr10 39065891 39066587 -106522701 + Tigger1 DNA MER2_type 1 680 -1738 9750 144 21 10 chr10 39066788 39068516 -106520772 + Tigger1 DNA MER2_type 672 2418 0 2224 100 0 44 chr10 39068837 39069157 -106520131 + AluSx SINE Alu 1 306 -6 207 0 0 0 chr10 39070278 39070301 -106518987 + (A)n Simple_repeat Simple_repeat 1 23 0 182 37 37 0 chr10 39071517 39071544 -106517744 + (TC)n Simple_repeat Simple_repeat 1 28 0 261 0 0 0 chr10 39071719 39071748 -106517540 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 893 176 19 0 chr10 39071749 39071908 -106517380 - AluJb SINE Alu -35 277 116 678 226 29 0 chr10 39071920 39072057 -106517231 - FLAM_C SINE Alu -2 141 1 2002 84 4 0 chr10 39072137 39072429 -106516859 - AluSp SINE Alu 0 327 35 2251 43 3 57 chr10 39072463 39072789 -106516499 - AluY SINE Alu 0 310 1 581 294 121 5 chr10 39072884 39073289 -106515999 - L1MC4a LINE L1 -1826 5982 5531 195 69 0 0 chr10 39073322 39073351 -106515937 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 869 155 0 0 chr10 39073351 39073493 -106515795 - L1PA10 LINE L1 -20 6148 6007 199 328 82 25 chr10 39075323 39075445 -106513843 - L2 LINE L2 -41 3231 3103 2072 104 0 4 chr10 39075466 39075745 -106513543 - AluSg SINE Alu -32 278 1 1472 206 11 4 chr10 39075784 39076065 -106513223 + AluJo SINE Alu 5 287 -25 302 98 20 0 chr10 39076070 39076121 -106513167 + (TAGA)n Simple_repeat Simple_repeat 1 52 0 22 35 0 0 chr10 39076703 39076732 -106512556 + AT_rich Low_complexity Low_complexity 1 29 0 2388 55 41 0 chr10 39076840 39077131 -106512157 - AluY SINE Alu -8 303 1 418 319 59 20 chr10 39077155 39077359 -106511929 - MIR SINE MIR -17 245 34 329 200 1 13 chr10 39077729 39077815 -106511473 - L1ME LINE L1 -340 5781 5696 1949 271 61 53 chr10 39077967 39078903 -106510385 - L2 LINE L2 -232 3081 2130 204 344 0 0 chr10 39079042 39079106 -106510182 - MIR SINE MIR -142 120 57 196 296 130 31 chr10 39079325 39079487 -106509801 - MIR SINE MIR -6 256 79 232 306 8 91 chr10 39079695 39079816 -106509472 - MIR3 SINE MIR -97 111 1 2132 81 10 39 chr10 39080437 39080801 -106508487 + AluY SINE Alu 1 311 0 1415 168 82 24 chr10 39080993 39081284 -106508004 + AluJo SINE Alu 1 308 -4 2458 65 7 7 chr10 39081556 39081866 -106507422 + AluY SINE Alu 1 310 -1 2017 94 69 4 chr10 39081880 39081999 -106507289 + AluSx SINE Alu 1 111 -201 222 37 0 0 chr10 39081999 39082026 -106507262 + (TA)n Simple_repeat Simple_repeat 2 28 0 2017 94 69 4 chr10 39082026 39082182 -106507106 + AluSx SINE Alu 111 294 -18 402 294 71 0 chr10 39082430 39082556 -106506732 - MIR SINE MIR -6 256 122 315 0 0 0 chr10 39083014 39083049 -106506239 + (TG)n Simple_repeat Simple_repeat 1 35 0 439 326 54 22 chr10 39083426 39083610 -106505678 - MER115 DNA AcHobo -440 253 64 2680 177 41 0 chr10 39084245 39084809 -106504479 - L1MA4 LINE L1 -5 6295 5709 330 302 8 71 chr10 39085543 39085669 -106503619 - L2 LINE L2 0 3313 3196 2325 82 0 10 chr10 39086524 39086828 -106502460 + AluY SINE Alu 1 301 -10 2425 83 0 0 chr10 39088147 39088448 -106500840 - AluY SINE Alu -10 301 1 2223 75 0 0 chr10 39088456 39088793 -106500495 - AluY SINE Alu 0 339 3 602 236 165 6 chr10 39089038 39089220 -106500068 - MIR SINE MIR -10 252 42 508 317 32 5 chr10 39089263 39089449 -106499839 + MER69 DNA AcHobo 134 324 -2202 700 182 15 35 chr10 39089604 39089724 -106499564 + MER69 DNA AcHobo 2002 2118 -408 2256 85 20 3 chr10 39089724 39090030 -106499258 - AluY SINE Alu 0 311 1 700 182 15 35 chr10 39090030 39090107 -106499181 + MER69 DNA AcHobo 2118 2195 -331 1659 197 55 3 chr10 39090110 39090455 -106498833 + MLT1A1 LTR MaLR 1 363 -2 3913 239 56 7 chr10 39090455 39091766 -106497522 + MLT1A1-int LTR MaLR 3 1370 -281 1596 161 27 7 chr10 39091767 39092065 -106497223 + MLT1A1 LTR MaLR 62 365 0 322 213 155 50 chr10 39092069 39092308 -106496980 + MER69 DNA AcHobo 2198 2461 -65 391 148 23 0 chr10 39092371 39092459 -106496829 + GA-rich Low_complexity Low_complexity 1 90 0 459 260 81 8 chr10 39093047 39093170 -106496118 - L2 LINE L2 0 3313 3182 26 0 0 0 chr10 39093897 39093923 -106495365 + AT_rich Low_complexity Low_complexity 1 26 0 474 166 21 35 chr10 39094037 39094182 -106495106 + GA-rich Low_complexity Low_complexity 4 146 0 806 272 144 32 chr10 39094311 39094823 -106494465 - MLT1G1 LTR MaLR -7 561 1 1156 194 22 117 chr10 39095098 39095501 -106493787 + MLT1A1 LTR MaLR 1 365 0 222 159 0 23 chr10 39095885 39095929 -106493359 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 201 226 0 0 chr10 39096000 39096053 -106493235 + (TATATG)n Simple_repeat Simple_repeat 1 53 0 6700 55 0 12 chr10 39096064 39097030 -106492258 - L1PA5 LINE L1 0 6154 5163 6164 71 0 0 chr10 39097522 39098597 -106490691 - L1PA5 LINE L1 -18 6136 5034 241 359 8 38 chr10 39098606 39098737 -106490551 + L2 LINE L2 2620 2746 -568 2280 85 0 31 chr10 39100845 39101163 -106488125 + AluY SINE Alu 1 308 -3 2348 62 7 10 chr10 39101170 39101478 -106487810 + AluY SINE Alu 1 307 -4 1699 191 24 0 chr10 39101719 39102012 -106487276 + AluJo SINE Alu 1 300 -12 234 150 0 0 chr10 39102281 39102321 -106486967 + (TA)n Simple_repeat Simple_repeat 2 41 0 203 182 55 0 chr10 39102368 39102423 -106486865 + (TA)n Simple_repeat Simple_repeat 1 58 0 330 113 0 0 chr10 39102560 39102622 -106486666 - L1MA7 LINE L1 -1 6290 6229 4284 243 69 55 chr10 39102622 39104711 -106484577 - L1 LINE L1 -2498 3536 1478 1742 123 97 8 chr10 39104711 39104979 -106484309 - AluSg SINE Alu -18 292 1 4284 243 69 55 chr10 39104979 39105486 -106483802 - L1 LINE L1 -4556 1478 980 1035 241 91 19 chr10 39105486 39105806 -106483482 - MER2 DNA MER2_type 0 344 2 4284 243 69 55 chr10 39105806 39106718 -106482570 - L1 LINE L1 -5054 980 359 250 310 151 26 chr10 39106968 39107239 -106482049 - L1M3a LINE L1 -5256 699 395 1159 315 10 12 chr10 39107330 39107743 -106481545 - L1M3a LINE L1 -5532 423 12 362 321 50 9 chr10 39107758 39107976 -106481312 - L1ME LINE L1 -5167 903 677 253 335 129 20 chr10 39108040 39108288 -106481000 + MLT1H LTR MaLR 38 312 -237 2265 43 7 4 chr10 39108538 39108854 -106480434 - AluY SINE Alu 0 317 1 192 97 0 0 chr10 39109256 39109287 -106480001 + (T)n Simple_repeat Simple_repeat 1 31 0 1849 183 21 3 chr10 39109527 39109915 -106479373 - L1MA6 LINE L1 0 6300 5906 2177 221 85 48 chr10 39110028 39110688 -106478600 + MLT1A1-int LTR MaLR 1052 1735 0 1592 221 22 3 chr10 39110688 39111046 -106478242 + MLT1A1 LTR MaLR 1 365 0 25 0 0 0 chr10 39111852 39111877 -106477411 + AT_rich Low_complexity Low_complexity 1 25 0 2358 79 3 7 chr10 39112381 39112685 -106476603 + AluY SINE Alu 1 303 -8 1377 272 10 36 chr10 39113243 39113736 -106475552 + L1ME1 LINE L1 5678 6157 -9 375 323 70 0 chr10 39114269 39114427 -106474861 - MIR SINE MIR -63 199 31 238 331 149 8 chr10 39114545 39114666 -106474622 - MIR3 SINE MIR -67 141 4 54 49 0 0 chr10 39115436 39115518 -106473770 + AT_rich Low_complexity Low_complexity 1 82 0 2300 84 0 3 chr10 39116026 39116322 -106472966 + AluSq SINE Alu 1 295 -18 381 303 133 0 chr10 39116973 39117138 -106472150 - MIR SINE MIR -27 235 49 209 229 21 0 chr10 39117506 39117554 -106471734 + L2 LINE L2 3223 3271 -1 22 0 0 0 chr10 39118024 39118046 -106471242 + AT_rich Low_complexity Low_complexity 1 22 0 495 209 127 0 chr10 39119032 39119142 -106470146 + FLAM_A SINE Alu 1 124 -9 281 430 36 0 chr10 39119159 39119352 -106469936 - L2 LINE L2 -584 2730 2531 2559 193 12 26 chr10 39119356 39119532 -106469756 + L1MB8 LINE L1 4966 5143 -1035 2331 67 40 3 chr10 39119532 39119830 -106469458 + AluY SINE Alu 1 309 -2 2559 193 12 26 chr10 39119830 39120478 -106468810 + L1MB8 LINE L1 5143 5773 -405 1343 111 0 0 chr10 39120492 39120673 -106468615 - AluSq SINE Alu -11 302 122 2168 111 0 7 chr10 39120676 39120982 -106468306 - AluY SINE Alu -5 306 3 1761 149 25 50 chr10 39120984 39121380 -106467908 + L1MB8 LINE L1 5788 6173 -5 2148 107 0 17 chr10 39121977 39122276 -106467012 + AluSq SINE Alu 1 294 -19 2417 28 41 0 chr10 39122529 39122819 -106466469 + AluY SINE Alu 1 302 -9 1938 88 0 0 chr10 39123556 39123806 -106465482 + AluSq SINE Alu 1 250 -63 1433 189 39 4 chr10 39123923 39124204 -106465084 - AluJb SINE Alu -21 291 1 2094 105 14 3 chr10 39124770 39125056 -106464232 + AluSq SINE Alu 1 289 -24 350 132 19 0 chr10 39126052 39126105 -106463183 + AluS SINE Alu 230 283 -17 1776 144 7 7 chr10 39126459 39126737 -106462551 - AluSx SINE Alu -1 311 34 31744 34 113 3 chr10 39126737 39131939 -106457349 + L1PA3 LINE L1 399 6171 0 912 250 119 81 chr10 39132802 39133322 -106455966 + MLT1F LTR MaLR 1 540 -2 21 0 0 0 chr10 39133328 39133349 -106455939 + AT_rich Low_complexity Low_complexity 1 21 0 195 69 0 0 chr10 39133524 39133553 -106455735 + (CAAA)n Simple_repeat Simple_repeat 1 29 0 2448 64 0 3 chr10 39133827 39134123 -106455165 - AluY SINE Alu -16 295 1 272 172 17 0 chr10 39134152 39134210 -106455078 + (TATG)n Simple_repeat Simple_repeat 2 60 0 317 215 0 76 chr10 39134288 39134367 -106454921 + Tigger3(Golem) DNA MER2_type 9 81 -2948 290 119 0 0 chr10 39134416 39134458 -106454830 - AluSg/x SINE Alu -127 173 132 2240 73 0 20 chr10 39134458 39134759 -106454529 - AluY SINE Alu -16 295 1 1436 116 71 22 chr10 39134763 39135030 -106454258 + Tigger3(Golem) DNA MER2_type 2749 3028 -1 243 0 0 0 chr10 39135910 39135937 -106453351 + (TG)n Simple_repeat Simple_repeat 2 28 0 319 324 22 15 chr10 39135971 39136107 -106453181 - LTR16A LTR ERVL -53 397 261 477 171 0 11 chr10 39136142 39136230 -106453058 - L1MCa LINE L1 -5762 664 578 2119 227 53 43 chr10 39136295 39136837 -106452451 - L1MCa LINE L1 -5786 640 90 2484 68 7 0 chr10 39136837 39137145 -106452143 - AluY SINE Alu -1 310 1 2119 227 53 43 chr10 39137145 39137201 -106452087 - L1MCa LINE L1 -6336 90 36 1981 193 0 48 chr10 39137325 39137740 -106451548 + MSTD LTR MaLR 1 395 -1 801 368 28 0 chr10 39137809 39138274 -106451014 - HERV16 LTR ERVL -3604 1392 915 458 361 72 13 chr10 39138413 39138718 -106450570 - HERV16 LTR ERVL -4339 657 335 2340 95 0 10 chr10 39138900 39139204 -106450084 + AluY SINE Alu 1 301 -10 731 287 116 59 chr10 39139364 39139768 -106449520 + LTR16A LTR ERVL 1 427 -30 255 325 133 39 chr10 39139786 39140091 -106449197 - LTR16A1 LTR ERVL -48 409 63 2184 119 0 13 chr10 39140091 39140401 -106448887 - AluSx SINE Alu -1 311 6 255 325 133 39 chr10 39140401 39140455 -106448833 - LTR16A1 LTR ERVL -394 63 16 2068 200 17 137 chr10 39140592 39141512 -106447776 - L1P LINE L1 -2893 3253 2444 5974 127 10 7 chr10 39141534 39142542 -106446746 - L1MA2 LINE L1 0 6304 5294 948 181 5 51 chr10 39142540 39142756 -106446532 - L1MA2 LINE L1 -1977 4169 3964 * 1858 223 8 21 chr10 39142754 39143238 -106446050 - L1P LINE L1 -3699 2447 1970 2889 123 45 0 chr10 39143246 39143717 -106445571 + L1PA15 LINE L1 5672 6163 -2 1906 143 38 58 chr10 39143843 39144208 -106445080 + MLT2D LTR ERVL 1 358 -56 198 71 0 0 chr10 39144221 39144249 -106445039 + (TCTCTG)n Simple_repeat Simple_repeat 3 30 0 291 71 0 0 chr10 39144249 39144291 -106444997 + (TG)n Simple_repeat Simple_repeat 1 42 0 251 294 101 0 chr10 39144294 39144403 -106444885 - L1MCa LINE L1 -5020 1406 1287 2114 98 32 11 chr10 39144435 39144720 -106444568 - AluY SINE Alu -20 291 1 297 95 0 0 chr10 39144769 39144811 -106444477 - U3 snRNA snRNA -175 42 1 485 329 43 30 chr10 39144958 39145286 -106444002 + L1ME3A LINE L1 1905 2236 -4160 637 263 44 10 chr10 39145291 39145588 -106443700 + L1ME3A LINE L1 2340 2646 -3569 852 331 68 27 chr10 39145592 39146005 -106443283 + L1ME3A LINE L1 5576 6023 -216 2217 93 7 13 chr10 39146005 39146306 -106442982 - AluSg SINE Alu -11 299 1 852 331 68 27 chr10 39146306 39146493 -106442795 + L1ME3A LINE L1 6023 6201 -38 2177 120 0 0 chr10 39147223 39147515 -106441773 - AluSx SINE Alu -16 296 5 2247 86 41 0 chr10 39147557 39147847 -106441441 - AluY SINE Alu -9 302 1 351 0 0 0 chr10 39149347 39149386 -106439902 + (CA)n Simple_repeat Simple_repeat 1 39 0 205 379 0 39 chr10 39149630 39149733 -106439555 - MIR3 SINE MIR -96 112 14 2283 176 69 5 chr10 39152337 39152770 -106436518 + LOR1b LTR ERV1 1 461 0 342 284 134 24 chr10 39152953 39153326 -106435962 - L1ME4a LINE L1 -110 6011 5598 397 304 77 28 chr10 39153400 39153581 -106435707 - MIR SINE MIR -11 251 62 1439 230 124 65 chr10 39153620 39154090 -106435198 + MER20B DNA MER1_type 44 570 -213 770 164 0 8 chr10 39154090 39154224 -106435064 + FLAM_C SINE Alu 1 133 0 1439 230 124 65 chr10 39154224 39154444 -106434844 + MER20B DNA MER1_type 570 775 -8 320 218 11 0 chr10 39154662 39154749 -106434539 + (GAATG)n Simple_repeat Simple_repeat 3 90 0 240 235 141 0 chr10 39154765 39154850 -106434438 - MER112 DNA MER1_type -163 97 1 1815 159 75 3 chr10 39155058 39155392 -106433896 + MLT1A1 LTR MaLR 8 365 0 26 0 0 0 chr10 39156022 39156048 -106433240 + AT_rich Low_complexity Low_complexity 1 26 0 1277 221 100 47 chr10 39156783 39157347 -106431941 - L1ME2 LINE L1 -21 6212 5558 2314 100 3 0 chr10 39157347 39157646 -106431642 - AluSp SINE Alu -13 300 1 1277 221 100 47 chr10 39157646 39157671 -106431617 - L1ME2 LINE L1 -675 5558 5536 735 129 8 16 chr10 39157679 39157803 -106431485 + AluY SINE Alu 175 297 -14 1807 252 67 42 chr10 39157829 39158252 -106431036 - L1ME2 LINE L1 -3289 2926 2515 2395 65 0 3 chr10 39158252 39158544 -106430744 - AluY SINE Alu -20 291 1 1807 252 67 42 chr10 39158544 39158928 -106430360 - L1ME2 LINE L1 -3700 2515 2122 354 45 0 0 chr10 39158928 39158972 -106430316 + (TG)n Simple_repeat Simple_repeat 2 45 0 1807 252 67 42 chr10 39158972 39159187 -106430101 - L1ME2 LINE L1 -4093 2122 1914 261 0 0 0 chr10 39161222 39161251 -106428037 + (G)n Simple_repeat Simple_repeat 1 29 0 24 0 0 0 chr10 39261734 39261758 -106327530 + AT_rich Low_complexity Low_complexity 1 24 0 536 267 88 80 chr10 39262501 39262857 -106326431 - HAL1 LINE L1 -269 2238 1872 2279 70 0 30 chr10 39262857 39263155 -106326133 + AluY SINE Alu 1 289 -22 536 267 88 80 chr10 39263155 39263476 -106325812 - HAL1 LINE L1 -635 1872 1555 2112 131 0 3 chr10 39263489 39263794 -106325494 + AluSx SINE Alu 1 304 -8 488 290 138 24 chr10 39263804 39264145 -106325143 + MLT1J2 LTR MaLR 1 380 -70 2204 75 7 3 chr10 39264148 39264463 -106324825 - AluY SINE Alu 0 316 1 2087 96 3 27 chr10 39264568 39264869 -106324419 + AluSc SINE Alu 1 294 -15 1114 180 28 37 chr10 39264932 39265064 -106324224 + AluJo SINE Alu 6 137 -175 207 0 0 0 chr10 39265064 39265087 -106324201 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1114 180 28 37 chr10 39265087 39265171 -106324117 + AluJo SINE Alu 137 220 -92 1910 158 7 0 chr10 39265374 39265665 -106323623 + AluSx SINE Alu 3 295 -17 189 0 0 0 chr10 39265774 39265795 -106323493 + (GA)n Simple_repeat Simple_repeat 2 22 0 189 0 0 0 chr10 39265944 39265965 -106323323 + (GA)n Simple_repeat Simple_repeat 2 22 0 2250 103 3 0 chr10 39266323 39266613 -106322675 + AluSp SINE Alu 3 293 -20 2486 305 60 53 chr10 39266792 39268251 -106321037 + L2 LINE L2 1841 3313 0 2444 70 0 0 chr10 39268547 39268846 -106320442 + AluY SINE Alu 1 299 -12 21 0 0 0 chr10 39268891 39268912 -106320376 + AT_rich Low_complexity Low_complexity 1 21 0 23 78 0 0 chr10 39270120 39270171 -106319117 + AT_rich Low_complexity Low_complexity 1 51 0 258 32 0 0 chr10 39270171 39270202 -106319086 + (GA)n Simple_repeat Simple_repeat 2 32 0 2312 94 0 10 chr10 39270274 39270572 -106318716 - AluY SINE Alu -16 295 1 32 26 0 0 chr10 39270648 39270687 -106318601 + AT_rich Low_complexity Low_complexity 1 39 0 1978 149 7 0 chr10 39271693 39271995 -106317293 - AluSx SINE Alu -8 304 1 25 0 0 0 chr10 39271997 39272022 -106317266 + AT_rich Low_complexity Low_complexity 1 25 0 255 295 13 0 chr10 39272059 39272137 -106317151 + Charlie2 DNA MER1_type 2784 2862 0 2103 111 10 3 chr10 39272343 39272641 -106316647 - AluSx SINE Alu -12 300 1 202 253 192 20 chr10 39272759 39272858 -106316430 + L2 LINE L2 3173 3288 -25 180 308 0 0 chr10 39273060 39273112 -106316176 + L2 LINE L2 3262 3313 0 400 294 153 13 chr10 39273122 39273350 -106315938 + MIR SINE MIR 1 260 -2 2331 78 10 0 chr10 39274020 39274314 -106314974 + AluY SINE Alu 1 297 -14 31 26 0 0 chr10 39274320 39274358 -106314930 + AT_rich Low_complexity Low_complexity 1 38 0 219 267 127 47 chr10 39274631 39274781 -106314507 + L3b LINE CR1 1137 1298 -285 322 320 24 0 chr10 39275367 39275492 -106313796 - L2 LINE L2 0 3313 3186 202 250 0 0 chr10 39277116 39277160 -106312128 + A-rich Low_complexity Low_complexity 1 44 0 290 26 26 0 chr10 39278086 39278125 -106311163 + (TG)n Simple_repeat Simple_repeat 2 41 0 303 202 24 0 chr10 39280469 39280553 -106308735 + Charlie2 DNA MER1_type 2287 2372 -490 2090 146 37 37 chr10 39280656 39281213 -106308075 - MLT2A2 LTR ERVL 0 554 1 530 178 13 53 chr10 39281213 39281364 -106307924 + Charlie2 DNA MER1_type 2463 2607 -255 651 217 190 0 chr10 39282809 39282993 -106306295 + MER20 DNA MER1_type 1 219 0 1070 190 40 117 chr10 39283082 39283477 -106305811 + MLT1A1 LTR MaLR 1 365 0 2208 118 0 0 chr10 39284837 39285134 -106304154 - AluSg SINE Alu -11 299 3 217 200 15 77 chr10 39285137 39285155 -106304133 + MIR SINE MIR 98 116 -146 1949 174 0 7 chr10 39285155 39285454 -106303834 - AluSx SINE Alu -15 297 1 217 200 15 77 chr10 39285454 39285500 -106303788 + MIR SINE MIR 116 158 -104 186 43 0 0 chr10 39285535 39285558 -106303730 + (CA)n Simple_repeat Simple_repeat 2 24 0 454 183 63 80 chr10 39286191 39286366 -106302922 + MER53 DNA DNA 5 176 -13 311 230 11 1 chr10 39286402 39286491 -106302797 - MLT1J1 LTR MaLR 0 446 363 225 178 110 27 chr10 39286714 39286787 -106302501 - MLT1J2 LTR MaLR -371 79 1 4806 89 21 44 chr10 39287051 39287549 -106301739 - L1PA11 LINE L1 0 6174 5666 2294 95 0 0 chr10 39287549 39287845 -106301443 - AluY SINE Alu -11 300 5 4806 89 21 44 chr10 39287845 39288020 -106301268 - L1PA11 LINE L1 -508 5666 5519 2233 129 0 0 chr10 39288020 39288323 -106300965 - AluSx SINE Alu -9 303 1 4806 89 21 44 chr10 39288323 39288444 -106300844 - L1PA11 LINE L1 -655 5519 5397 2222 85 0 0 chr10 39288804 39289113 -106300175 + AluY SINE Alu 1 309 0 22 0 0 0 chr10 39290014 39290036 -106299252 + AT_rich Low_complexity Low_complexity 1 22 0 207 136 23 23 chr10 39290352 39290396 -106298892 + CT-rich Low_complexity Low_complexity 1 44 0 1168 209 15 116 chr10 39291035 39291441 -106297847 + MLT1A1 LTR MaLR 1 365 0 588 316 39 19 chr10 39291488 39291694 -106297594 - MIR SINE MIR -31 231 22 351 144 0 7 chr10 39291933 39292031 -106297257 - Alu SINE Alu 0 302 134 2476 70 3 0 chr10 39292031 39292333 -106296955 - AluSp SINE Alu -10 303 1 366 176 14 0 chr10 39293775 39293849 -106295439 + MER103 DNA DNA 40 114 -52 2018 137 44 22 chr10 39294319 39294684 -106294604 + THE1C LTR MaLR 1 373 -2 2379 50 0 3 chr10 39296149 39296479 -106292809 - AluY SINE Alu 0 329 1 198 0 0 0 chr10 39296479 39296501 -106292787 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2025 111 4 4 chr10 39296501 39296780 -106292508 - AluSc SINE Alu -30 279 1 271 310 0 0 chr10 39297339 39297397 -106291891 - MER91 DNA MER1_type -81 59 2 1234 168 0 42 chr10 39297549 39297787 -106291501 - L1MC1 LINE L1 -17 6316 6089 2017 133 14 3 chr10 39298223 39298517 -106290771 + AluSg SINE Alu 1 297 -13 1163 154 46 10 chr10 39298607 39298832 -106290456 + AluSg/x SINE Alu 83 314 0 2759 173 7 9 chr10 39298903 39299459 -106289829 + L1MA5 LINE L1 5746 6300 0 2132 256 204 23 chr10 39300312 39300456 -106288832 + L1MC4 LINE L1 6459 6576 -1466 2259 96 7 3 chr10 39300456 39300758 -106288530 - AluSc SINE Alu -6 303 1 2132 256 204 23 chr10 39300758 39301539 -106287749 + L1MC4 LINE L1 6576 7214 -828 656 214 0 24 chr10 39301539 39301665 -106287623 + FLAM_A SINE Alu 1 123 -10 2132 256 204 23 chr10 39301665 39301960 -106287328 + L1MC4 LINE L1 7214 7901 -141 248 160 0 0 chr10 39301961 39302011 -106287277 + L1MC4 LINE L1 7989 8038 -4 2072 111 0 42 chr10 39302034 39302341 -106286947 + AluSx SINE Alu 5 298 -14 749 290 81 76 chr10 39302748 39303363 -106285925 + L2 LINE L2 2538 3168 -145 336 287 81 0 chr10 39303425 39303561 -106285727 + L1ME LINE L1 28 174 -5896 2265 115 0 10 chr10 39303567 39304033 -106285255 - AluY SINE Alu 0 463 1 770 165 17 11 chr10 39304033 39304209 -106285079 + CT-rich Low_complexity Low_complexity 3 179 0 266 163 11 43 chr10 39304226 39304318 -106284970 + CT-rich Low_complexity Low_complexity 3 91 0 424 235 31 0 chr10 39304373 39304471 -106284817 + L1ME LINE L1 438 538 -5532 763 256 96 82 chr10 39304486 39304875 -106284413 + L1ME LINE L1 676 1058 -5061 2261 100 7 0 chr10 39304875 39305176 -106284112 + AluY SINE Alu 1 303 -8 763 256 96 82 chr10 39305176 39306003 -106283285 + L1ME LINE L1 1058 1941 -4178 2215 125 0 0 chr10 39306014 39306319 -106282969 + AluSg SINE Alu 1 305 -5 1716 122 6 113 chr10 39306327 39306707 -106282581 + AluSg SINE Alu 1 344 0 2092 122 0 7 chr10 39306712 39307008 -106282280 + AluSc SINE Alu 1 294 -15 242 262 49 18 chr10 39307010 39307174 -106282114 + L1ME LINE L1 1909 2077 -4003 26 50 0 0 chr10 39307187 39307227 -106282061 + AT_rich Low_complexity Low_complexity 1 40 0 286 276 62 14 chr10 39307245 39307390 -106281898 + L1ME LINE L1 2110 2261 -3819 2279 79 3 20 chr10 39307394 39307698 -106281590 + AluY SINE Alu 1 299 -12 2380 277 70 38 chr10 39307708 39308891 -106280397 + L1ME LINE L1 3066 4314 -1766 311 0 0 22 chr10 39308891 39308937 -106280351 + L1PA2 LINE L1 6108 6152 -3 2380 277 70 38 chr10 39308937 39309333 -106279955 + L1ME LINE L1 4314 4696 -1384 2388 66 0 31 chr10 39309344 39309663 -106279625 - AluY SINE Alu -2 309 1 278 326 12 0 chr10 39309690 39309776 -106279512 + MIR SINE MIR 65 151 -111 22 35 0 0 chr10 39309812 39309841 -106279447 + AT_rich Low_complexity Low_complexity 1 29 0 2271 87 20 0 chr10 39310095 39310394 -106278894 - AluY SINE Alu -6 305 1 670 263 38 6 chr10 39312138 39312298 -106276990 + MER5A DNA MER1_type 1 165 -24 1870 214 47 69 chr10 39312307 39312929 -106276359 + MLT1E2 LTR MaLR 18 625 -1 21 57 0 0 chr10 39313230 39313265 -106276023 + AT_rich Low_complexity Low_complexity 1 35 0 2505 58 0 0 chr10 39313265 39313558 -106275730 - AluY SINE Alu -18 293 1 210 312 152 0 chr10 39313559 39313684 -106275604 + MIR SINE MIR 104 247 -15 285 266 185 17 chr10 39313752 39313925 -106275363 - LTR16A1 LTR ERVL 0 457 256 2374 77 7 10 chr10 39314199 39314498 -106274790 - AluSp SINE Alu -15 298 1 21 36 0 0 chr10 39316728 39316756 -106272532 + AT_rich Low_complexity Low_complexity 1 28 0 1886 167 16 8 chr10 39316763 39317147 -106272141 - L1MA4 LINE L1 -9 6291 5905 25 0 0 0 chr10 39318663 39318688 -106270600 + AT_rich Low_complexity Low_complexity 1 25 0 3378 183 19 4 chr10 39320109 39320786 -106268502 - L1PA16 LINE L1 -16 6150 5464 2037 123 33 3 chr10 39320816 39321116 -106268172 + AluSc SINE Alu 1 309 0 455 286 78 10 chr10 39321772 39321965 -106267323 + MIR SINE MIR 39 250 -12 1985 97 87 7 chr10 39323088 39323377 -106265911 - AluSx SINE Alu 0 312 1 698 125 70 7 chr10 39323461 39323627 -106265661 + L1MA9 LINE L1 6110 6311 -1 850 284 0 0 chr10 39324159 39324381 -106264907 + Charlie1 DNA MER1_type 1 222 -2539 580 212 15 0 chr10 39324380 39324517 -106264771 + Charlie1 DNA MER1_type 2622 2760 -1 * 2146 138 0 10 chr10 39324683 39324994 -106264294 - AluSg SINE Alu -2 308 1 22 35 0 0 chr10 39325301 39325330 -106263958 + AT_rich Low_complexity Low_complexity 1 29 0 2414 172 16 31 chr10 39327180 39327278 -106262010 - L1MC1 LINE L1 -13 6320 6222 2220 77 3 0 chr10 39327278 39327605 -106261683 - AluSp SINE Alu 0 328 1 2414 172 16 31 chr10 39327605 39328022 -106261266 - L1MC1 LINE L1 -111 6222 5812 2040 145 0 0 chr10 39329118 39329407 -106259881 + AluSg SINE Alu 1 289 -21 23 0 0 0 chr10 39329440 39329463 -106259825 + AT_rich Low_complexity Low_complexity 1 23 0 2370 90 3 3 chr10 39329638 39329949 -106259339 - AluY SINE Alu 0 311 1 2351 83 0 0 chr10 39330153 39330455 -106258833 + AluY SINE Alu 2 303 -8 470 290 88 20 chr10 39331481 39331822 -106257466 - L1MCc LINE L1 -4893 1530 1167 2173 119 3 10 chr10 39332388 39332700 -106256588 - AluSx SINE Alu -2 310 1 271 333 36 23 chr10 39332734 39332953 -106256335 - L1MCc LINE L1 -6180 243 22 489 310 88 41 chr10 39333141 39333560 -106255728 - L1MEc LINE L1 -4574 1822 1384 23 0 0 0 chr10 39334637 39334660 -106254628 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr10 39335044 39335069 -106254219 + AT_rich Low_complexity Low_complexity 1 25 0 2383 67 0 32 chr10 39335199 39335512 -106253776 + AluY SINE Alu 1 303 -8 24 0 0 0 chr10 39337356 39337380 -106251908 + AT_rich Low_complexity Low_complexity 1 24 0 26 0 0 0 chr10 39338856 39338882 -106250406 + AT_rich Low_complexity Low_complexity 1 26 0 418 255 0 0 chr10 39338962 39339060 -106250228 - MER58 DNA MER1_type -4 2416 2319 424 260 21 0 chr10 39339072 39339168 -106250120 - MER58 DNA MER1_type -241 100 3 2332 73 0 3 chr10 39339244 39339544 -106249744 - AluY SINE Alu -12 299 1 212 296 93 0 chr10 39339601 39339655 -106249633 + L2 LINE L2 3206 3264 -8 23 0 0 0 chr10 39339859 39339882 -106249406 + AT_rich Low_complexity Low_complexity 1 23 0 1824 162 3 0 chr10 39339882 39340179 -106249109 - AluSx SINE Alu -14 298 1 323 254 13 9 chr10 39340722 39340948 -106248340 + CT-rich Low_complexity Low_complexity 1 227 0 1851 178 7 47 chr10 39341754 39341991 -106247297 - MLT1B LTR MaLR 0 390 174 2228 114 55 0 chr10 39341991 39342334 -106246954 - THE1B LTR MaLR 0 364 3 1851 178 7 47 chr10 39342334 39342501 -106246787 - MLT1B LTR MaLR -216 174 2 2377 85 3 0 chr10 39343021 39343316 -106245972 - AluY SINE Alu -15 296 1 21 57 0 0 chr10 39343321 39343356 -106245932 + AT_rich Low_complexity Low_complexity 1 35 0 321 261 79 61 chr10 39343775 39343940 -106245348 - MLT1K LTR MaLR -26 562 395 180 125 0 0 chr10 39344030 39344062 -106245226 + (TC)n Simple_repeat Simple_repeat 2 33 0 609 193 30 52 chr10 39344341 39344476 -106244812 - FLAM_A SINE Alu 0 133 2 2461 82 0 0 chr10 39344750 39345053 -106244235 + AluY SINE Alu 1 303 -8 201 74 0 0 chr10 39345177 39345204 -106244084 + (TG)n Simple_repeat Simple_repeat 1 27 0 581 156 0 90 chr10 39345686 39345808 -106243480 - HY1 scRNA scRNA -1 111 1 2075 125 16 13 chr10 39346275 39346586 -106242702 + AluSx SINE Alu 1 312 0 360 283 0 17 chr10 39346588 39346708 -106242580 + MLT1H LTR MaLR 91 208 -341 24 53 0 0 chr10 39346847 39346885 -106242403 + AT_rich Low_complexity Low_complexity 1 38 0 21 36 0 0 chr10 39347145 39347173 -106242115 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr10 39347230 39347251 -106242037 + AT_rich Low_complexity Low_complexity 1 21 0 2307 77 0 0 chr10 39347254 39347540 -106241748 + AluY SINE Alu 1 286 -25 2346 83 0 29 chr10 39348089 39348403 -106240885 + AluY SINE Alu 1 305 -6 1352 199 106 9 chr10 39348604 39348935 -106240353 + MLT1A1 LTR MaLR 1 363 -2 2628 51 0 0 chr10 39350744 39351055 -106238233 - AluY SINE Alu 0 311 1 1604 193 78 49 chr10 39351347 39351426 -106237862 + MER101 LTR ERV1 11 86 -388 2243 79 0 7 chr10 39351426 39351729 -106237559 + AluY SINE Alu 1 301 -10 1604 193 78 49 chr10 39351729 39352100 -106237188 + MER101 LTR ERV1 86 474 0 207 0 0 0 chr10 39352622 39352645 -106236643 + (TA)n Simple_repeat Simple_repeat 1 23 0 234 198 0 41 chr10 39352668 39352688 -106236600 + (TA)n Simple_repeat Simple_repeat 1 20 -96 1452 135 0 5 chr10 39352688 39352895 -106236393 + AluSg/x SINE Alu 82 287 -23 234 198 0 41 chr10 39352895 39352995 -106236293 + (TA)n Simple_repeat Simple_repeat 20 116 0 299 304 0 7 chr10 39353010 39353145 -106236143 + (TA)n Simple_repeat Simple_repeat 1 134 0 222 191 0 0 chr10 39353152 39353199 -106236089 + (TATG)n Simple_repeat Simple_repeat 2 48 0 405 0 0 0 chr10 39353407 39353452 -106235836 + (TA)n Simple_repeat Simple_repeat 2 46 0 2364 107 3 0 chr10 39353459 39353768 -106235520 - AluSg SINE Alu 0 310 1 1713 173 45 8 chr10 39353777 39354159 -106235129 - L1MB3 LINE L1 -3 6180 5785 261 211 0 0 chr10 39354170 39354227 -106235061 + (TATG)n Simple_repeat Simple_repeat 4 60 0 2245 107 0 7 chr10 39354256 39354555 -106234733 - AluSg SINE Alu -13 297 1 320 235 59 29 chr10 39354675 39354777 -106234511 - L2 LINE L2 0 3313 3209 180 0 0 0 chr10 39355021 39355041 -106234247 + (TA)n Simple_repeat Simple_repeat 2 21 0 29 60 0 0 chr10 39356287 39356337 -106232951 + AT_rich Low_complexity Low_complexity 1 50 0 1830 109 3 25 chr10 39356424 39356707 -106232581 + AluSc SINE Alu 1 277 -32 243 0 0 0 chr10 39356709 39356736 -106232552 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 246 347 27 24 chr10 39356882 39357176 -106232112 + MARNA DNA Mariner 244 538 -48 405 0 0 0 chr10 39357276 39357321 -106231967 + (TA)n Simple_repeat Simple_repeat 1 45 0 2364 107 3 0 chr10 39357328 39357637 -106231651 - AluSg SINE Alu 0 310 1 1713 173 45 8 chr10 39357646 39358028 -106231260 - L1MB3 LINE L1 -3 6180 5785 261 211 0 0 chr10 39358039 39358096 -106231192 + (TATG)n Simple_repeat Simple_repeat 4 60 0 2245 107 0 7 chr10 39358125 39358424 -106230864 - AluSg SINE Alu -13 297 1 320 235 59 29 chr10 39358544 39358646 -106230642 - L2 LINE L2 0 3313 3209 180 0 0 0 chr10 39358890 39358910 -106230378 + (TA)n Simple_repeat Simple_repeat 2 21 0 2479 185 61 17 chr10 39359279 39359981 -106229307 + L1M3 LINE L1 5053 5789 -394 678 233 0 10 chr10 39360017 39360210 -106229078 + L1M4 LINE L1 4762 4952 -1194 1702 222 20 10 chr10 39360252 39360762 -106228526 + L1M4 LINE L1 2497 3011 -3135 1403 195 8 16 chr10 39360764 39361015 -106228273 + AluJo SINE Alu 40 288 -24 252 282 19 10 chr10 39361031 39361134 -106228154 + L1M4 LINE L1 3035 3138 -3008 2522 58 10 3 chr10 39361261 39361570 -106227718 - AluY SINE Alu 0 311 1 2296 75 0 10 chr10 39361582 39361877 -106227411 - AluY SINE Alu -19 292 1 1868 255 78 66 chr10 39361878 39362804 -106226484 + L1M4 LINE L1 3392 4336 -1810 2104 106 3 0 chr10 39362804 39363138 -106226150 + AluSx SINE Alu 1 335 0 1868 255 78 66 chr10 39363138 39363295 -106225993 + L1M4 LINE L1 4336 4490 -1656 2439 78 0 0 chr10 39363298 39363605 -106225683 + AluY SINE Alu 4 310 -1 2168 139 0 0 chr10 39363773 39364083 -106225205 - AluSx SINE Alu -2 310 1 1985 135 17 3 chr10 39364092 39364388 -106224900 - AluSg SINE Alu -10 300 1 513 267 111 33 chr10 39364433 39364793 -106224495 + L1M4 LINE L1 3060 3447 -2699 2178 115 6 13 chr10 39364796 39365109 -106224179 + AluSx SINE Alu 1 311 -1 230 81 27 0 chr10 39365113 39365150 -106224138 + (GAA)n Simple_repeat Simple_repeat 1 38 0 2112 71 0 51 chr10 39365163 39365482 -106223806 + AluY SINE Alu 2 305 0 1143 244 11 78 chr10 39365534 39366058 -106223230 + L1M4 LINE L1 3485 3973 -2173 640 243 114 64 chr10 39366799 39367157 -106222131 - MLT1J1 LTR MaLR 0 446 71 5946 137 38 20 chr10 39367234 39368445 -106220843 + L1PB1 LINE L1 4413 5601 -550 2218 114 3 3 chr10 39368445 39368752 -106220536 + AluSx SINE Alu 1 307 -5 5946 137 38 20 chr10 39368752 39368768 -106220520 + L1PB1 LINE L1 5601 5615 -536 2283 89 0 3 chr10 39368768 39369060 -106220228 + AluSc SINE Alu 1 291 -18 5946 137 38 20 chr10 39369060 39369525 -106219763 + L1PB1 LINE L1 5615 6146 -5 191 163 0 82 chr10 39369763 39369812 -106219476 - MIR3 SINE MIR -7 201 157 1295 172 42 135 chr10 39369904 39370334 -106218954 - MLT1B LTR MaLR 0 390 1 1300 223 28 16 chr10 39370334 39370652 -106218636 - MLT1B-int LTR MaLR 0 1735 1414 431 226 43 0 chr10 39370647 39370740 -106218548 - MLT1B-int LTR MaLR -270 1101 1005 * 2547 242 22 6 chr10 39370750 39371535 -106217753 + L1 LINE L1 2473 3269 -2877 1415 151 28 21 chr10 39371541 39371832 -106217456 + L1 LINE L1 3861 4153 -1993 2177 126 3 3 chr10 39371948 39372250 -106217038 - AluSg SINE Alu -8 302 1 822 290 79 64 chr10 39372652 39373165 -106216123 - L2 LINE L2 0 3313 2733 2127 120 0 7 chr10 39373165 39373464 -106215824 - AluSc SINE Alu -12 297 1 822 290 79 64 chr10 39373464 39373727 -106215561 - L2 LINE L2 -580 2733 2475 190 348 11 43 chr10 39374173 39374265 -106215023 + MIR SINE MIR 43 131 -131 188 290 58 0 chr10 39374392 39374461 -106214827 - L3 LINE CR1 0 1577 1505 1957 131 0 20 chr10 39375786 39376092 -106213196 + AluSx SINE Alu 1 300 -12 182 366 14 0 chr10 39376363 39376434 -106212854 - L2 LINE L2 0 3272 3201 2357 87 0 10 chr10 39376693 39376992 -106212296 - AluY SINE Alu -15 296 1 27 81 0 0 chr10 39377088 39377150 -106212138 + AT_rich Low_complexity Low_complexity 1 62 0 630 172 74 25 chr10 39377182 39377304 -106211984 + FLAM_C SINE Alu 5 132 -11 220 327 167 6 chr10 39377372 39377534 -106211754 - MIR SINE MIR -70 192 5 203 288 68 0 chr10 39377612 39377671 -106211617 - L3 LINE CR1 -2 1575 1513 265 125 0 0 chr10 39377855 39377895 -106211393 + AluS SINE Alu 22 61 -240 898 160 7 0 chr10 39377895 39378045 -106211243 + AluSp/q SINE Alu 159 309 -4 470 113 0 12 chr10 39378683 39378763 -106210525 + MADE1 DNA Mariner 2 80 0 802 82 0 0 chr10 39378871 39378969 -106210319 + AluY SINE Alu 199 296 -15 1712 121 4 0 chr10 39379144 39379375 -106209913 + AluSq SINE Alu 22 253 -60 303 333 123 9 chr10 39379687 39379801 -106209487 - MIR3 SINE MIR -48 160 34 243 61 0 0 chr10 39381436 39381469 -106207819 + (TG)n Simple_repeat Simple_repeat 1 33 0 268 330 54 9 chr10 39381967 39382079 -106207209 + MIR SINE MIR 21 137 -71 22 0 0 0 chr10 39382217 39382239 -106207049 + AT_rich Low_complexity Low_complexity 1 22 0 2120 120 30 0 chr10 39382371 39382672 -106206616 + AluSx SINE Alu 3 312 0 360 281 39 31 chr10 39382933 39383061 -106206227 - L2 LINE L2 0 3313 3185 317 237 21 11 chr10 39383089 39383182 -106206106 + (TA)n Simple_repeat Simple_repeat 1 94 0 227 200 0 83 chr10 39383184 39383244 -106206044 + Tigger5 DNA MER2_type 1 55 -2268 331 213 25 12 chr10 39383254 39383334 -106205954 + Tigger5 DNA MER2_type 2237 2317 -6 2315 92 0 0 chr10 39383344 39383636 -106205652 + AluSg SINE Alu 2 293 -17 1257 291 129 17 chr10 39383754 39384504 -106204784 - L2 LINE L2 -229 3084 2251 659 203 19 61 chr10 39384648 39384860 -106204428 + L1MA8 LINE L1 6086 6288 -3 277 209 143 11 chr10 39385273 39385364 -106203924 + MIR SINE MIR 46 148 -114 1981 189 35 16 chr10 39388324 39388748 -106200540 + Tigger2a DNA MER2_type 3 434 0 2204 104 3 0 chr10 39388788 39389097 -106200191 + AluSg SINE Alu 1 310 0 368 179 34 0 chr10 39389760 39389877 -106199411 + (TA)n Simple_repeat Simple_repeat 2 122 0 2236 103 7 3 chr10 39389921 39390231 -106199057 - AluSq SINE Alu -2 311 1 27 29 0 0 chr10 39390231 39390265 -106199023 + AT_rich Low_complexity Low_complexity 1 34 0 583 107 83 0 chr10 39390285 39390528 -106198760 + (TA)n Simple_repeat Simple_repeat 1 263 0 244 246 14 14 chr10 39391213 39391282 -106198006 + GA-rich Low_complexity Low_complexity 2 70 0 190 330 127 21 chr10 39391809 39392045 -106197243 - L2 LINE L2 -1232 2082 1822 415 312 75 14 chr10 39392084 39392443 -106196845 + L1ME LINE L1 5318 5698 -472 913 42 17 0 chr10 39392511 39392631 -106196657 + L1PA8 LINE L1 6049 6170 -2 1379 277 27 16 chr10 39392876 39393388 -106195900 + L1MCb LINE L1 46 563 -5482 2410 238 67 22 chr10 39393415 39394143 -106195145 + L1MD1 LINE L1 18 778 -5762 3929 216 60 19 chr10 39394164 39394914 -106194374 + L1MD1 LINE L1 878 1695 -4845 2278 107 0 0 chr10 39394914 39395213 -106194075 + AluSq SINE Alu 1 299 -14 3929 216 60 19 chr10 39395213 39395629 -106193659 + L1MD1 LINE L1 1695 2092 -4448 1546 251 63 48 chr10 39395637 39395775 -106193513 + MER76 LTR ERV 4 138 -550 2059 113 7 0 chr10 39395775 39396078 -106193210 - AluY SINE Alu 0 305 1 1546 251 63 48 chr10 39396078 39396551 -106192737 + MER76 LTR ERV 138 624 -64 3434 173 54 36 chr10 39396551 39397362 -106191926 + LTR1B LTR ERV1 1 826 0 1546 251 63 48 chr10 39397362 39397428 -106191860 + MER76 LTR ERV 624 688 0 1450 195 56 134 chr10 39397434 39397785 -106191503 + L1MD1 LINE L1 2113 2490 -4050 2579 42 7 0 chr10 39397785 39398092 -106191196 + AluY SINE Alu 1 309 -2 1450 195 56 134 chr10 39398092 39398464 -106190824 + L1MD1 LINE L1 2490 2890 -3650 2144 112 0 0 chr10 39398464 39398750 -106190538 - AluSc SINE Alu -23 286 1 1450 195 56 134 chr10 39398750 39399346 -106189942 + L1MD1 LINE L1 2890 3350 -3190 * 3085 226 42 59 chr10 39399344 39400008 -106189280 + L1MD1 LINE L1 5080 5754 -882 2088 146 0 0 chr10 39400008 39400309 -106188979 + AluSx SINE Alu 1 301 -11 3085 226 42 59 chr10 39400309 39400532 -106188756 + L1MD1 LINE L1 5754 5979 -657 2080 122 3 0 chr10 39400532 39400847 -106188441 - AluSq SINE Alu 0 316 1 3085 226 42 59 chr10 39400847 39401516 -106187772 + L1MD1 LINE L1 5979 6622 -14 2250 104 0 3 chr10 39401530 39401829 -106187459 + AluSc SINE Alu 1 298 -11 1864 251 59 64 chr10 39401913 39402135 -106187153 + L1MCb LINE L1 551 773 -5791 2261 95 0 3 chr10 39402135 39402429 -106186859 - AluY SINE Alu -18 293 1 1864 251 59 64 chr10 39402429 39402819 -106186469 + L1MCb LINE L1 773 1163 -5401 2208 127 0 0 chr10 39402819 39403110 -106186178 + AluSx SINE Alu 1 291 -21 1864 251 59 64 chr10 39403110 39404192 -106185096 + L1MCb LINE L1 1163 2249 -4315 1618 188 32 0 chr10 39404192 39404474 -106184814 - AluSx SINE Alu -21 291 1 1864 251 59 64 chr10 39404474 39404943 -106184345 + L1MCb LINE L1 2249 2719 -3845 2222 119 0 0 chr10 39404943 39405237 -106184051 + AluSg SINE Alu 1 294 -16 1864 251 59 64 chr10 39405237 39405720 -106183568 + L1MCb LINE L1 2719 3381 -3183 1986 171 0 0 chr10 39405720 39406025 -106183263 + AluSx SINE Alu 1 305 -7 1864 251 59 64 chr10 39406025 39406164 -106183124 + L1MCb LINE L1 3381 3519 -3045 2406 100 7 0 chr10 39406164 39406465 -106182823 + AluSq SINE Alu 1 303 -10 2244 111 3 0 chr10 39406681 39406978 -106182310 - AluSp SINE Alu -15 298 1 232 174 22 0 chr10 39408575 39408621 -106180667 + (TG)n Simple_repeat Simple_repeat 1 47 0 2586 48 0 10 chr10 39409239 39409553 -106179735 + AluY SINE Alu 1 311 0 430 228 18 23 chr10 39410992 39411112 -106178176 - MLT1J2 LTR MaLR -258 151 37 745 257 6 6 chr10 39411224 39411407 -106177881 - MER58A DNA MER1_type 0 224 42 1992 124 11 0 chr10 39411407 39411690 -106177598 + AluSx SINE Alu 1 286 -26 2352 84 3 0 chr10 39411699 39411996 -106177292 + AluY SINE Alu 1 298 -13 22 80 0 0 chr10 39412743 39412793 -106176495 + AT_rich Low_complexity Low_complexity 1 50 0 2259 118 0 0 chr10 39412990 39413287 -106176001 + AluSg SINE Alu 1 297 -13 2244 86 3 23 chr10 39413409 39413713 -106175575 + AluY SINE Alu 1 298 -13 3355 139 191 11 chr10 39414541 39415241 -106174047 + LTR1B LTR ERV1 1 826 0 23 0 0 0 chr10 39416055 39416078 -106173210 + AT_rich Low_complexity Low_complexity 1 23 0 520 241 38 19 chr10 39416310 39416468 -106172820 + MER45A DNA AcHobo 1 161 -17 2237 233 84 9 chr10 39417667 39418349 -106170939 - L1PB4 LINE L1 -843 5303 4571 * 2398 158 13 4 chr10 39418345 39418813 -106170475 + L1PB4 LINE L1 5314 5785 -371 261 226 40 16 chr10 39418815 39418939 -106170349 + (TA)n Simple_repeat Simple_repeat 2 128 0 556 106 0 32 chr10 39418939 39419033 -106170255 + L1PB4 LINE L1 5775 5865 -291 606 90 0 0 chr10 39419034 39419123 -106170165 - AluSc SINE Alu -6 303 215 612 198 0 8 chr10 39419123 39419249 -106170039 + L1PB4 LINE L1 6027 6151 -5 2089 98 7 26 chr10 39419442 39419748 -106169540 + AluSx SINE Alu 3 302 -10 2026 134 0 3 chr10 39419768 39420076 -106169212 + AluSq SINE Alu 1 307 0 2421 72 0 3 chr10 39420135 39420440 -106168848 + AluY SINE Alu 1 304 -7 399 284 151 32 chr10 39420465 39420802 -106168486 + L1MCa LINE L1 1203 1978 -4448 556 164 8 16 chr10 39421806 39421928 -106167360 - L1MA6 LINE L1 -474 5826 5706 2185 144 32 21 chr10 39421931 39422368 -106166920 + L1MA6 LINE L1 5856 6297 -3 2281 76 0 3 chr10 39422378 39422666 -106166622 + AluY SINE Alu 1 287 -24 279 0 0 0 chr10 39422682 39422713 -106166575 + (TG)n Simple_repeat Simple_repeat 2 32 0 1431 212 14 7 chr10 39422810 39423098 -106166190 + AluJo SINE Alu 1 290 -22 475 164 35 0 chr10 39423284 39423400 -106165888 + L1M4 LINE L1 3129 3248 -2898 515 326 11 4 chr10 39423553 39423820 -106165468 + L1M4 LINE L1 4519 4787 -1359 308 301 65 0 chr10 39423867 39423960 -106165328 + L1M4 LINE L1 4795 4893 -1253 2451 78 0 0 chr10 39423967 39424273 -106165015 - AluY SINE Alu -2 309 4 1868 255 78 66 chr10 39424276 39424433 -106164855 - L1M4 LINE L1 -1656 4490 4336 2103 106 3 0 chr10 39424433 39424767 -106164521 - AluSx SINE Alu 0 335 1 1868 255 78 66 chr10 39424767 39425693 -106163595 - L1M4 LINE L1 -1810 4336 3392 2296 75 0 10 chr10 39425694 39425989 -106163299 + AluY SINE Alu 1 292 -19 2522 58 10 3 chr10 39426001 39426310 -106162978 + AluY SINE Alu 1 311 0 252 282 19 10 chr10 39426437 39426540 -106162748 - L1M4 LINE L1 -3008 3138 3035 1389 199 8 16 chr10 39426556 39426807 -106162481 - AluJo SINE Alu -24 288 40 1702 222 20 10 chr10 39426809 39427319 -106161969 - L1M4 LINE L1 -3135 3011 2497 678 233 0 10 chr10 39427361 39427554 -106161734 - L1M4 LINE L1 -1194 4952 4762 2073 121 0 4 chr10 39427700 39427973 -106161315 - AluSx SINE Alu -22 290 19 192 308 164 27 chr10 39428228 39428374 -106160914 + MIR3 SINE MIR 12 177 -31 214 276 0 46 chr10 39428402 39428489 -106160799 - L2 LINE L2 -59 3254 3172 2298 97 3 0 chr10 39429913 39430213 -106159075 - AluY SINE Alu -10 301 1 566 102 0 34 chr10 39430716 39430834 -106158454 + (GGAA)n Simple_repeat Simple_repeat 2 115 0 343 0 43 0 chr10 39431216 39431263 -106158025 + (TC)n Simple_repeat Simple_repeat 2 50 0 1685 271 134 6 chr10 39431603 39432534 -106156754 - L1ME3A LINE L1 -30 6140 5089 234 0 0 0 chr10 39432558 39432584 -106156704 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 2448 98 0 0 chr10 39433413 39433719 -106155569 - AluSc SINE Alu -3 306 1 2377 53 3 13 chr10 39433728 39434027 -106155261 - AluY SINE Alu -15 296 1 26 30 0 0 chr10 39434033 39434066 -106155222 + AT_rich Low_complexity Low_complexity 1 33 0 1244 222 22 0 chr10 39434072 39434342 -106154946 - AluJo SINE Alu -36 276 1 2386 76 7 3 chr10 39434480 39434784 -106154504 + AluSg SINE Alu 1 305 -5 2397 59 3 3 chr10 39435373 39435680 -106153608 - AluY SINE Alu -4 307 1 597 28 0 0 chr10 39436162 39436233 -106153055 + (CA)n Simple_repeat Simple_repeat 2 72 0 25 51 0 0 chr10 39436613 39436652 -106152636 + AT_rich Low_complexity Low_complexity 1 39 0 1540 203 42 25 chr10 39437651 39438010 -106151278 + MLT1A1 LTR MaLR 1 365 0 183 383 34 7 chr10 39439077 39439226 -106150062 + L2 LINE L2 1818 1970 -1344 226 250 26 0 chr10 39439240 39439316 -106149972 - L1ME3A LINE L1 -12 6158 6081 27 0 0 0 chr10 39439415 39439442 -106149846 + AT_rich Low_complexity Low_complexity 1 27 0 23 54 0 0 chr10 39439537 39439574 -106149714 + AT_rich Low_complexity Low_complexity 1 37 0 311 289 0 0 chr10 39440163 39440246 -106149042 + MIR SINE MIR 25 107 -155 1099 255 79 43 chr10 39440282 39440752 -106148536 - MLT1D LTR MaLR 0 505 19 1067 257 97 9 chr10 39441327 39441780 -106147508 + MLT1D LTR MaLR 1 390 0 215 298 157 16 chr10 39441851 39441972 -106147316 - L2 LINE L2 -219 3053 2916 314 324 48 59 chr10 39442227 39442499 -106146789 - L2 LINE L2 -828 2486 2218 22 56 0 0 chr10 39443532 39443568 -106145720 + AT_rich Low_complexity Low_complexity 1 36 0 2235 88 10 0 chr10 39444035 39444332 -106144956 + AluSq SINE Alu 1 300 -13 402 21 0 0 chr10 39444352 39444399 -106144889 + (TG)n Simple_repeat Simple_repeat 2 48 0 1304 188 36 10 chr10 39445264 39445568 -106143720 - L1MA6 LINE L1 -13 6287 5976 2323 100 0 3 chr10 39445985 39446296 -106142992 + AluSg SINE Alu 1 310 0 306 283 123 9 chr10 39448747 39448853 -106140435 + L2 LINE L2 3193 3310 -3 425 185 12 25 chr10 39449240 39449321 -106139967 - MER3 DNA MER1_type -129 80 1 2192 102 0 7 chr10 39449402 39449697 -106139591 + AluSq SINE Alu 1 293 -20 21 0 0 0 chr10 39449735 39449756 -106139532 + AT_rich Low_complexity Low_complexity 1 21 0 26 50 0 0 chr10 39449812 39449852 -106139436 + AT_rich Low_complexity Low_complexity 1 40 0 2361 63 7 3 chr10 39449961 39450264 -106139024 - AluY SINE Alu -2 309 6 1046 83 8 0 chr10 39450269 39450401 -106138887 - AluY SINE Alu -178 133 1 2403 82 0 3 chr10 39450415 39450721 -106138567 - AluY SINE Alu -6 305 1 1098 229 23 29 chr10 39450755 39451061 -106138227 - L1MC3 LINE L1 -1493 6292 5989 707 201 34 117 chr10 39451076 39451123 -106138165 - L1MC3 LINE L1 -1965 5820 5771 297 0 0 0 chr10 39451123 39451156 -106138132 + (TG)n Simple_repeat Simple_repeat 1 33 0 707 201 34 117 chr10 39451156 39451298 -106137990 - L1MC3 LINE L1 -2014 5771 5662 1955 118 3 67 chr10 39451298 39451629 -106137659 + AluSx SINE Alu 1 310 -2 707 201 34 117 chr10 39451629 39451736 -106137552 - L1MC3 LINE L1 -2123 5662 5548 570 286 16 22 chr10 39451735 39451920 -106137368 - L1M4 LINE L1 -2039 4107 3924 * 801 76 0 0 chr10 39451926 39452031 -106137257 + AluY SINE Alu 198 302 -9 2950 240 72 38 chr10 39452052 39452264 -106137024 - L1M4 LINE L1 -2214 3932 3729 2203 84 30 10 chr10 39452264 39452563 -106136725 - AluY SINE Alu -6 305 1 2950 240 72 38 chr10 39452563 39452823 -106136465 - L1M4 LINE L1 -2417 3729 3479 2158 97 3 7 chr10 39452823 39453122 -106136166 - AluSc SINE Alu -11 298 1 2950 240 72 38 chr10 39453122 39453913 -106135375 - L1M4 LINE L1 -2667 3479 2625 338 147 15 0 chr10 39454040 39454108 -106135180 + GA-rich Low_complexity Low_complexity 4 72 0 2379 251 95 42 chr10 39454116 39454221 -106135067 + L1ME3A LINE L1 4795 4893 -1277 2434 80 3 0 chr10 39454221 39454523 -106134765 - AluY SINE Alu -8 303 1 2379 251 95 42 chr10 39454523 39455000 -106134288 + L1ME3A LINE L1 4893 5343 -827 2197 88 3 3 chr10 39455000 39455294 -106133994 - AluY SINE Alu -17 294 1 2379 251 95 42 chr10 39455294 39456015 -106133273 + L1ME3A LINE L1 5343 6164 -6 2111 113 0 23 chr10 39457457 39457766 -106131522 + AluSp SINE Alu 1 302 -11 2126 116 7 0 chr10 39457770 39458072 -106131216 + AluSg SINE Alu 1 304 -6 1800 134 3 27 chr10 39458195 39458511 -106130777 + AluSx SINE Alu 1 309 0 1920 148 0 10 chr10 39458639 39458937 -106130351 + AluSx SINE Alu 6 300 -12 1734 162 0 46 chr10 39459061 39459388 -106129900 + AluJb SINE Alu 1 312 0 205 208 113 0 chr10 39459634 39459687 -106129601 - MIR SINE MIR -93 169 111 2007 123 0 36 chr10 39461231 39461539 -106127749 - AluSx SINE Alu -15 297 1 2155 113 3 10 chr10 39461582 39461883 -106127405 - AluSx SINE Alu -13 299 1 2266 68 7 4 chr10 39462172 39462476 -106126812 + AluY SINE Alu 1 305 0 714 328 60 19 chr10 39462995 39463364 -106125924 - LTR16B LTR ERVL -78 386 3 387 73 0 0 chr10 39463591 39463646 -106125642 + (TG)n Simple_repeat Simple_repeat 1 55 0 195 42 0 0 chr10 39463645 39463669 -106125619 + (GA)n Simple_repeat Simple_repeat 1 24 0 * 455 359 58 26 chr10 39463836 39464215 -106125073 - HERVL LTR ERVL -643 4842 4452 232 189 38 19 chr10 39464216 39464269 -106125019 - MLT1F1 LTR MaLR -83 484 431 677 323 59 65 chr10 39464329 39464605 -106124683 - HERVL LTR ERVL -1053 3943 3667 2088 93 41 0 chr10 39464605 39464895 -106124393 - AluSx SINE Alu -10 302 1 677 323 59 65 chr10 39464895 39465216 -106124072 - HERVL LTR ERVL -1329 3667 3381 2435 59 3 13 chr10 39465216 39465522 -106123766 - AluY SINE Alu -8 303 1 677 323 59 65 chr10 39465522 39465769 -106123519 - HERVL LTR ERVL -1615 3381 3134 626 293 44 4 chr10 39465848 39466077 -106123211 - HERVL LTR ERVL -2371 3283 3046 1794 260 128 11 chr10 39466214 39467025 -106122263 + L1ME1 LINE L1 5241 6158 -8 2385 85 0 0 chr10 39467688 39467995 -106121293 + AluY SINE Alu 1 307 -4 4419 134 15 126 chr10 39468156 39469703 -106119585 - pTR5 LTR ERV1 0 2606 1524 194 257 14 81 chr10 39469756 39469830 -106119458 - MIR SINE MIR -75 187 119 2381 71 0 3 chr10 39469846 39470143 -106119145 - AluY SINE Alu -15 296 1 2387 58 0 35 chr10 39471699 39472010 -106117278 + AluY SINE Alu 1 300 -11 356 67 0 0 chr10 39472066 39472111 -106117177 - Tigger3(Golem) DNA MER2_type -58 2971 2927 1854 158 10 0 chr10 39472327 39472618 -106116670 + AluSx SINE Alu 1 294 -18 648 138 0 0 chr10 39472657 39472751 -106116537 - AluS SINE Alu -218 95 2 254 105 0 0 chr10 39472803 39472841 -106116447 + AluSp SINE Alu 130 167 -136 1666 110 8 4 chr10 39472841 39473078 -106116210 + AluSq SINE Alu 76 313 0 512 276 69 23 chr10 39473157 39473331 -106115957 + MIR SINE MIR 3 184 -78 5940 145 76 45 chr10 39473412 39473730 -106115558 - Tigger3b DNA MER2_type -1797 1231 925 215 61 30 0 chr10 39473730 39473763 -106115525 + (TGAG)n Simple_repeat Simple_repeat 1 34 0 5940 145 76 45 chr10 39473763 39474317 -106114971 - Tigger3b DNA MER2_type -2103 925 308 1989 104 0 4 chr10 39474317 39474576 -106114712 + AluSq SINE Alu 1 258 -55 5940 145 76 45 chr10 39474576 39474894 -106114394 - Tigger3b DNA MER2_type -2720 308 2 269 368 19 32 chr10 39474909 39475064 -106114224 + L2 LINE L2 2371 2523 -791 186 207 0 52 chr10 39475214 39475272 -106114016 + L2 LINE L2 2685 2739 -575 22 0 0 0 chr10 39475518 39475540 -106113748 + AT_rich Low_complexity Low_complexity 1 22 0 2462 68 3 3 chr10 39475853 39476163 -106113125 + AluY SINE Alu 1 310 -1 21 57 0 0 chr10 39476180 39476215 -106113073 + AT_rich Low_complexity Low_complexity 1 35 0 2039 127 0 0 chr10 39476785 39477060 -106112228 + AluSg SINE Alu 1 275 -35 316 361 53 24 chr10 39477082 39477290 -106111998 + L1M2 LINE L1 2229 2442 -4407 955 172 25 129 chr10 39477482 39477808 -106111480 + L1MB4 LINE L1 4213 4504 -1642 211 269 11 32 chr10 39477821 39477914 -106111374 + A-rich Low_complexity Low_complexity 2 92 0 769 75 0 0 chr10 39478144 39478238 -106111050 + AluSc SINE Alu 41 134 -175 2218 111 3 3 chr10 39478238 39478544 -106110744 + AluSg SINE Alu 1 306 -4 1228 183 0 31 chr10 39478566 39478795 -106110493 - AluJo SINE Alu -20 292 71 396 321 52 21 chr10 39478803 39478996 -106110292 + MIR SINE MIR 28 226 -36 903 188 12 12 chr10 39480579 39480739 -106108549 - FRAM SINE Alu -15 161 2 1583 181 43 0 chr10 39480760 39481036 -106108252 - AluJb SINE Alu -24 288 1 21 0 0 0 chr10 39481041 39481062 -106108226 + AT_rich Low_complexity Low_complexity 1 21 0 1921 107 71 7 chr10 39481138 39481418 -106107870 - AluSg SINE Alu -12 298 1 1884 157 3 13 chr10 39482628 39482941 -106106347 - AluJb SINE Alu -2 310 1 186 207 0 52 chr10 39483342 39483400 -106105888 + L2 LINE L2 2685 2739 -575 22 0 0 0 chr10 39483646 39483668 -106105620 + AT_rich Low_complexity Low_complexity 1 22 0 2462 68 3 3 chr10 39483981 39484291 -106104997 + AluY SINE Alu 1 310 -1 21 57 0 0 chr10 39484308 39484343 -106104945 + AT_rich Low_complexity Low_complexity 1 35 0 2314 119 0 0 chr10 39484913 39485353 -106103935 + AluSg SINE Alu 1 440 0 1785 159 7 7 chr10 39485713 39486014 -106103274 - AluSx SINE Alu -11 301 1 562 213 44 38 chr10 39487356 39487539 -106101749 - LTR37B LTR ERV1 -29 439 256 4073 185 29 53 chr10 39487541 39487935 -106101353 + L1MB4 LINE L1 4905 5307 -873 2073 129 3 0 chr10 39487935 39488229 -106101059 + AluSq SINE Alu 1 295 -18 4073 185 29 53 chr10 39488229 39488986 -106100302 + L1MB4 LINE L1 5307 6025 -155 2049 149 0 0 chr10 39488986 39489282 -106100006 - AluSc SINE Alu -10 299 4 4073 185 29 53 chr10 39489282 39489397 -106099891 + L1MB4 LINE L1 6025 6141 -39 2054 127 7 16 chr10 39489439 39489747 -106099541 - AluSp SINE Alu -8 305 1 1478 227 110 46 chr10 39490125 39490633 -106098655 - L1MA7 LINE L1 -9 6282 5744 374 248 50 14 chr10 39490633 39490774 -106098514 + L1M LINE L1 5259 5404 -955 4382 167 92 31 chr10 39490774 39492223 -106097065 + pTR5 LTR ERV1 741 2438 0 621 214 200 99 chr10 39492247 39492793 -106096495 + L1MCa LINE L1 1711 2311 -4115 2052 148 0 0 chr10 39492802 39493105 -106096183 + AluSx SINE Alu 1 303 -9 647 215 71 92 chr10 39493288 39493614 -106095674 - MER114 LTR ERV -284 364 46 2171 102 0 3 chr10 39493817 39494134 -106095154 - AluY SINE Alu 0 316 1 27 62 0 0 chr10 39494288 39494336 -106094952 + AT_rich Low_complexity Low_complexity 1 48 0 2157 92 0 36 chr10 39494592 39494898 -106094390 + AluY SINE Alu 2 296 -15 2196 117 0 3 chr10 39495152 39495451 -106093837 - AluSx SINE Alu -14 298 1 1511 157 52 28 chr10 39495824 39496111 -106093177 + AluJb SINE Alu 4 297 -15 569 236 0 39 chr10 39496717 39496844 -106092444 - FLAM_A SINE Alu -15 127 6 210 71 0 0 chr10 39496860 39496888 -106092400 + (CATTT)n Simple_repeat Simple_repeat 3 30 0 1224 223 37 7 chr10 39496888 39497157 -106092131 - AluJb SINE Alu -29 283 7 237 65 0 0 chr10 39497448 39497479 -106091809 + (GGAGA)n Simple_repeat Simple_repeat 5 35 0 1843 121 66 0 chr10 39497493 39497750 -106091538 + AluSq SINE Alu 9 282 -31 466 141 26 0 chr10 39497750 39497906 -106091382 + GA-rich Low_complexity Low_complexity 1 160 0 5118 192 75 35 chr10 39497914 39498341 -106090947 + L1MC3 LINE L1 6305 6714 -1071 2257 105 7 0 chr10 39498341 39498636 -106090652 - AluSq SINE Alu -16 297 1 5118 192 75 35 chr10 39498636 39499622 -106089666 + L1MC3 LINE L1 6714 7774 -11 659 234 89 101 chr10 39499670 39499837 -106089451 - LTR24B LTR ERV1 -4 572 405 2408 60 0 16 chr10 39499837 39500151 -106089137 - AluY SINE Alu -2 309 1 659 234 89 101 chr10 39500151 39500411 -106088877 - LTR24B LTR ERV1 -171 405 150 2063 128 7 3 chr10 39500546 39500843 -106088445 + AluSg SINE Alu 1 298 -12 200 336 78 35 chr10 39501026 39501142 -106088146 - MIR SINE MIR -68 140 20 1570 180 3 21 chr10 39501373 39501712 -106087576 - L1MA5 LINE L1 0 6300 5968 2388 87 0 0 chr10 39501717 39502017 -106087271 - AluSq SINE Alu -13 300 1 22 56 0 0 chr10 39502479 39502515 -106086773 + AT_rich Low_complexity Low_complexity 1 36 0 372 209 52 67 chr10 39503298 39503432 -106085856 + Charlie1 DNA MER1_type 1671 1802 -959 214 319 43 35 chr10 39503703 39503819 -106085469 - L2 LINE L2 -479 2835 2719 28 0 0 0 chr10 39503826 39503854 -106085434 + AT_rich Low_complexity Low_complexity 1 28 0 2229 101 0 10 chr10 39504282 39504589 -106084699 + AluSq SINE Alu 1 304 -9 189 0 0 0 chr10 39504892 39504913 -106084375 + (A)n Simple_repeat Simple_repeat 1 21 0 24 32 0 0 chr10 39505351 39505382 -106083906 + AT_rich Low_complexity Low_complexity 1 31 0 2231 101 3 0 chr10 39505798 39506096 -106083192 + AluSp SINE Alu 1 299 -14 22 0 0 0 chr10 39506096 39506118 -106083170 + AT_rich Low_complexity Low_complexity 1 22 0 2436 57 3 13 chr10 39506161 39506475 -106082813 + AluY SINE Alu 1 311 0 1042 83 8 0 chr10 39506479 39506611 -106082677 + AluY SINE Alu 1 133 -178 2314 73 7 3 chr10 39506616 39506919 -106082369 + AluY SINE Alu 6 309 -2 26 50 0 0 chr10 39507028 39507068 -106082220 + AT_rich Low_complexity Low_complexity 1 40 0 21 0 0 0 chr10 39507124 39507145 -106082143 + AT_rich Low_complexity Low_complexity 1 21 0 2186 102 0 7 chr10 39507183 39507478 -106081810 - AluSq SINE Alu -20 293 1 389 185 12 25 chr10 39507559 39507640 -106081648 + MER3 DNA MER1_type 1 80 -129 309 283 123 9 chr10 39508027 39508133 -106081155 - L2 LINE L2 -3 3310 3193 2352 100 0 3 chr10 39510584 39510895 -106078393 - AluSg SINE Alu 0 310 1 1887 157 3 13 chr10 39511415 39511728 -106077560 + AluJb SINE Alu 1 310 -2 1923 107 71 7 chr10 39512938 39513218 -106076070 + AluSg SINE Alu 1 298 -12 21 0 0 0 chr10 39513294 39513315 -106075973 + AT_rich Low_complexity Low_complexity 1 21 0 1596 181 43 0 chr10 39513320 39513596 -106075692 + AluJb SINE Alu 1 288 -24 927 182 13 13 chr10 39513617 39513776 -106075512 + FRAM SINE Alu 2 160 -16 427 321 52 21 chr10 39515359 39515552 -106073736 - MIR SINE MIR -36 226 28 1259 183 0 31 chr10 39515560 39515789 -106073499 + AluJo SINE Alu 71 292 -20 1861 164 3 3 chr10 39515813 39516123 -106073165 - AluSg SINE Alu 0 310 1 724 75 0 0 chr10 39516123 39516217 -106073071 - AluSc SINE Alu -175 134 41 211 269 11 32 chr10 39516447 39516540 -106072748 + T-rich Low_complexity Low_complexity 2 92 0 863 164 24 128 chr10 39516553 39516882 -106072406 - L1 LINE L1 -1642 4504 4210 2071 98 7 0 chr10 39517300 39517575 -106071713 - AluSx SINE Alu -35 277 1 684 252 64 58 chr10 39517599 39518131 -106071157 - L1MEd LINE L1 -4923 1196 662 2230 95 0 19 chr10 39518254 39518571 -106070717 + AluY SINE Alu 1 311 0 23 0 0 0 chr10 39518667 39518690 -106070598 + AT_rich Low_complexity Low_complexity 1 23 0 288 312 39 39 chr10 39518787 39519194 -106070094 - L1MEc LINE L1 -4980 1416 1010 2409 60 27 0 chr10 39519572 39519870 -106069418 - AluY SINE Alu -5 306 1 256 311 8 25 chr10 39520067 39520186 -106069102 + CT-rich Low_complexity Low_complexity 2 118 0 515 342 58 19 chr10 39520398 39520711 -106068577 + L2 LINE L2 2522 2846 -468 307 318 156 65 chr10 39520747 39521055 -106068233 + L2 LINE L2 2935 3270 -2 236 323 100 31 chr10 39521703 39521833 -106067455 - L3 LINE CR1 -19 1558 1420 190 314 20 39 chr10 39521879 39521981 -106067307 - L3 LINE CR1 -278 1299 1200 372 133 0 0 chr10 39522835 39522895 -106066393 + (TTCC)n Simple_repeat Simple_repeat 3 62 0 219 277 69 54 chr10 39523066 39523196 -106066092 + L3 LINE CR1 1171 1302 -275 354 268 55 0 chr10 39523303 39523430 -106065858 + MER117 DNA MER1_type 30 163 -34 31 26 0 0 chr10 39524199 39524237 -106065051 + AT_rich Low_complexity Low_complexity 1 38 0 2387 67 0 10 chr10 39524351 39524650 -106064638 - AluY SINE Alu -15 296 1 839 158 0 0 chr10 39524977 39525110 -106064178 - AluSg/x SINE Alu -4 308 176 2105 103 7 42 chr10 39525209 39525519 -106063769 + AluSx SINE Alu 1 299 -13 369 355 130 5 chr10 39525755 39525955 -106063333 - MIR SINE MIR -37 225 1 2312 109 0 10 chr10 39526017 39526329 -106062959 - AluSc SINE Alu 0 309 1 403 229 46 23 chr10 39526890 39527021 -106062267 + LTR33A LTR ERVL 367 500 -23 1873 81 85 0 chr10 39527023 39527310 -106061978 - AluY SINE Alu 0 309 1 2360 65 0 23 chr10 39528018 39528325 -106060963 + AluY SINE Alu 1 300 -11 1986 140 0 7 chr10 39528624 39528909 -106060379 + AluSx SINE Alu 5 287 -25 28 48 0 0 chr10 39528909 39528951 -106060337 + AT_rich Low_complexity Low_complexity 1 42 0 559 69 0 0 chr10 39529411 39529483 -106059805 - AluY SINE Alu -111 200 129 2363 67 7 13 chr10 39529956 39530256 -106059032 - AluY SINE Alu -13 298 1 1789 177 7 0 chr10 39530512 39530857 -106058431 - AluJb SINE Alu 0 312 1 1930 105 58 10 chr10 39530859 39531154 -106058134 - AluSx SINE Alu -3 309 1 21 0 0 0 chr10 39531509 39531530 -106057758 + AT_rich Low_complexity Low_complexity 1 21 0 2062 103 21 10 chr10 39531653 39531944 -106057344 - AluSc SINE Alu -15 294 1 22 56 0 0 chr10 39532170 39532206 -106057082 + AT_rich Low_complexity Low_complexity 1 36 0 1500 113 5 23 chr10 39532207 39532342 -106056946 + AluSc SINE Alu 1 132 -177 2091 139 3 0 chr10 39532342 39532645 -106056643 + AluSx SINE Alu 1 304 -8 1500 113 5 23 chr10 39532645 39532730 -106056558 + AluSc SINE Alu 132 217 -92 257 49 0 0 chr10 39532730 39532771 -106056517 + AluY SINE Alu 260 300 -1 26 30 0 0 chr10 39532825 39532858 -106056430 + AT_rich Low_complexity Low_complexity 1 33 0 2339 94 3 3 chr10 39533794 39534102 -106055186 + AluSp SINE Alu 1 308 -5 2334 83 0 10 chr10 39534102 39534404 -106054884 + AluSq SINE Alu 1 299 -14 1428 171 24 99 chr10 39534436 39534676 -106054612 + L1MA3 LINE L1 5908 6106 -199 2108 116 18 0 chr10 39534676 39534961 -106054327 - AluSx SINE Alu -22 290 1 1428 171 24 99 chr10 39534961 39535136 -106054152 + L1MA3 LINE L1 6106 6292 -13 34 0 0 0 chr10 39535138 39535172 -106054116 + AT_rich Low_complexity Low_complexity 1 34 0 2864 160 16 57 chr10 39535172 39535298 -106053990 + LTR49-int LTR ERV1 3971 4101 -2602 2203 127 10 0 chr10 39535298 39535605 -106053683 + AluSx SINE Alu 1 310 -2 2864 160 16 57 chr10 39535605 39536125 -106053163 + LTR49-int LTR ERV1 4101 4641 -2062 2283 97 27 0 chr10 39536125 39536423 -106052865 - AluSp SINE Alu -7 306 1 2864 160 16 57 chr10 39536423 39536697 -106052591 + LTR49-int LTR ERV1 4641 6070 -633 230 266 138 11 chr10 39536946 39537040 -106052248 + LTR47A LTR ERVL 261 366 -86 217 286 154 0 chr10 39537333 39537424 -106051864 - L2 LINE L2 -1002 2312 2208 434 290 59 35 chr10 39537564 39537733 -106051555 - MIR SINE MIR -1 261 89 2151 104 0 11 chr10 39539229 39539549 -106049739 - AluSx SINE Alu 0 317 1 3536 216 37 24 chr10 39540165 39540344 -106048944 - L1MC3 LINE L1 -848 6937 6762 1300 213 114 21 chr10 39540344 39540678 -106048610 - MLT1A1 LTR MaLR 0 365 1 3536 216 37 24 chr10 39540678 39541408 -106047880 - L1MC3 LINE L1 -1023 6762 6016 250 278 106 40 chr10 39541768 39541919 -106047369 + L2 LINE L2 3136 3296 -17 255 157 0 0 chr10 39541936 39541987 -106047301 + (TGAA)n Simple_repeat Simple_repeat 2 52 0 2111 132 0 0 chr10 39542229 39542518 -106046770 + AluSg SINE Alu 1 289 -21 2183 110 7 0 chr10 39543423 39543732 -106045556 - AluY SINE Alu 0 311 1 181 284 116 21 chr10 39545119 39545214 -106044074 + MIR SINE MIR 83 186 -76 433 115 0 0 chr10 39546624 39546685 -106042603 + AluS SINE Alu 1 61 -248 322 96 0 137 chr10 39546873 39546946 -106042342 - L1PA10 LINE L1 0 6168 6106 338 307 57 21 chr10 39546973 39547113 -106042175 + HAL1 LINE L1 757 901 -1606 319 273 96 60 chr10 39547404 39547938 -106041350 + HAL1 LINE L1 1211 1763 -744 32 0 0 0 chr10 39548638 39548670 -106040618 + AT_rich Low_complexity Low_complexity 1 32 0 1645 189 3 0 chr10 39548670 39548955 -106040333 - AluSq SINE Alu -26 287 2 2281 98 0 43 chr10 39549279 39549604 -106039684 - AluSq SINE Alu -2 311 1 2043 118 3 0 chr10 39549638 39549926 -106039362 - AluSx SINE Alu -1 311 23 2182 92 13 19 chr10 39550148 39550463 -106038825 + AluSp SINE Alu 1 313 0 22 35 0 0 chr10 39551512 39551541 -106037747 + AT_rich Low_complexity Low_complexity 1 29 0 198 323 8 60 chr10 39551924 39552057 -106037231 + L2 LINE L2 2599 2724 -590 561 310 163 33 chr10 39552167 39552657 -106036631 + L2 LINE L2 1838 2391 -923 1628 159 106 22 chr10 39552850 39553208 -106036080 - MER67A LTR ERV1 0 543 156 1952 233 45 48 chr10 39553529 39554198 -106035090 - MER31-int LTR ERV1 -3973 963 297 1912 119 0 7 chr10 39554198 39554511 -106034777 + AluSx SINE Alu 1 311 0 256 242 0 0 chr10 39554626 39554688 -106034600 - MER112 DNA MER1_type -188 72 11 215 377 26 45 chr10 39554926 39555080 -106034208 + L2 LINE L2 3095 3245 -27 2141 115 0 13 chr10 39555532 39555837 -106033451 + AluSx SINE Alu 1 301 -11 378 0 0 0 chr10 39556005 39556047 -106033241 + (TG)n Simple_repeat Simple_repeat 2 43 0 1466 106 20 0 chr10 39556049 39556248 -106033040 - AluSg/x SINE Alu -31 279 77 2474 63 0 7 chr10 39556248 39556549 -106032739 - AluY SINE Alu -12 299 1 21 57 0 0 chr10 39556701 39556736 -106032552 + AT_rich Low_complexity Low_complexity 1 35 0 2128 98 0 33 chr10 39556747 39557053 -106032235 + AluSc SINE Alu 1 296 -13 2436 81 0 3 chr10 39557506 39557816 -106031472 + AluY SINE Alu 3 311 0 857 219 0 12 chr10 39558185 39558345 -106030943 - FRAM SINE Alu -7 159 2 376 282 112 12 chr10 39559668 39559838 -106029450 - MIR SINE MIR -55 207 21 2420 64 0 13 chr10 39560626 39560937 -106028351 + AluY SINE Alu 1 307 -4 1228 163 6 137 chr10 39561685 39562022 -106027266 - AluJb SINE Alu -10 302 10 243 0 0 0 chr10 39562192 39562219 -106027069 + (CA)n Simple_repeat Simple_repeat 2 28 0 660 150 60 51 chr10 39562454 39562653 -106026635 + MER6 DNA MER2_type -65 865 0 29 70 0 0 chr10 39562797 39562854 -106026434 + AT_rich Low_complexity Low_complexity 1 57 0 4730 146 75 27 chr10 39562939 39564030 -106025258 + pTR5 LTR ERV1 57 275 -439 268 276 10 0 chr10 39564031 39564129 -106025159 + LTR30 LTR ERV1 544 642 -80 1352 136 0 5 chr10 39564132 39564353 -106024935 + pTR5 LTR ERV1 172 391 -2047 270 284 67 45 chr10 39564774 39564908 -106024380 - L2 LINE L2 -534 2780 2644 301 276 9 57 chr10 39565107 39565212 -106024076 - L2 LINE L2 -994 2320 2221 505 131 0 24 chr10 39565316 39565400 -106023888 - AluJb SINE Alu -19 293 212 733 169 8 0 chr10 39565430 39565548 -106023740 - FLAM_C SINE Alu -12 121 3 212 290 103 56 chr10 39567736 39567843 -106021445 + L2 LINE L2 3190 3301 -12 209 233 0 0 chr10 39567851 39567894 -106021394 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 2821 13 0 0 chr10 39568105 39568416 -106020872 - AluY SINE Alu 0 311 1 1683 158 30 33 chr10 39568893 39569196 -106020092 + AluJb SINE Alu 1 302 -10 2036 141 10 0 chr10 39569198 39569497 -106019791 + AluSq SINE Alu 1 302 -11 216 0 0 0 chr10 39569498 39569522 -106019766 + (CA)n Simple_repeat Simple_repeat 1 24 0 21 57 0 0 chr10 39569710 39569745 -106019543 + AT_rich Low_complexity Low_complexity 1 35 0 1757 187 0 0 chr10 39569817 39570116 -106019172 + AluJo SINE Alu 1 299 -13 1066 147 0 0 chr10 39570190 39570372 -106018916 + AluSg/x SINE Alu 128 309 0 221 214 34 146 chr10 39570608 39570697 -106018591 - L2 LINE L2 -1 3312 3234 698 65 11 0 chr10 39571255 39571378 -106017910 - AluSg/x SINE Alu 0 316 193 2102 104 7 4 chr10 39571979 39572304 -106016984 + AluSc SINE Alu 1 326 0 1825 124 4 0 chr10 39572523 39572782 -106016506 - AluSx SINE Alu -15 297 38 21 36 0 0 chr10 39573522 39573550 -106015738 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr10 39574171 39574197 -106015091 + AT_rich Low_complexity Low_complexity 1 26 0 394 319 69 84 chr10 39574201 39574521 -106014767 + L1MEd LINE L1 81 395 -5724 2028 128 7 0 chr10 39574782 39575080 -106014208 + AluSx SINE Alu 1 300 -12 223 224 0 66 chr10 39575246 39575322 -106013966 + A-rich Low_complexity Low_complexity 5 75 0 29 28 0 0 chr10 39575324 39575360 -106013928 + AT_rich Low_complexity Low_complexity 1 36 0 2515 58 7 0 chr10 39575367 39575676 -106013612 + AluY SINE Alu 1 311 0 430 228 18 23 chr10 39577121 39577241 -106012047 - MLT1J2 LTR MaLR -258 151 37 745 257 6 6 chr10 39577353 39577536 -106011752 - MER58A DNA MER1_type 0 224 42 1950 127 11 0 chr10 39577536 39577819 -106011469 + AluSx SINE Alu 1 286 -26 2365 81 3 0 chr10 39577828 39578125 -106011163 + AluY SINE Alu 1 298 -13 22 80 0 0 chr10 39578872 39578922 -106010366 + AT_rich Low_complexity Low_complexity 1 50 0 2259 118 0 0 chr10 39579119 39579416 -106009872 + AluSg SINE Alu 1 297 -13 2254 85 3 23 chr10 39579538 39579843 -106009445 + AluY SINE Alu 1 299 -12 3294 138 197 11 chr10 39580671 39581368 -106007920 + LTR1B LTR ERV1 1 826 0 23 0 0 0 chr10 39582189 39582212 -106007076 + AT_rich Low_complexity Low_complexity 1 23 0 520 241 38 19 chr10 39582444 39582602 -106006686 + MER45A DNA AcHobo 1 161 -17 2233 232 84 9 chr10 39583803 39584483 -106004805 - L1PB4 LINE L1 -845 5301 4571 * 2398 158 13 4 chr10 39584479 39584947 -106004341 + L1PB4 LINE L1 5314 5785 -371 251 235 34 17 chr10 39584949 39585068 -106004220 + (TA)n Simple_repeat Simple_repeat 1 121 0 556 106 0 32 chr10 39585068 39585162 -106004126 + L1PB4 LINE L1 5775 5865 -291 606 90 0 0 chr10 39585163 39585252 -106004036 - AluSc SINE Alu -6 303 215 612 198 0 8 chr10 39585252 39585378 -106003910 + L1PB4 LINE L1 6027 6151 -5 2089 98 7 26 chr10 39585571 39585877 -106003411 + AluSx SINE Alu 3 302 -10 2026 134 0 3 chr10 39585897 39586205 -106003083 + AluSq SINE Alu 1 307 0 2395 78 0 3 chr10 39586264 39586571 -106002717 + AluY SINE Alu 1 306 -5 399 284 151 32 chr10 39586596 39586933 -106002355 + L1MCa LINE L1 1203 1978 -4448 556 164 8 16 chr10 39587937 39588059 -106001229 - L1MA6 LINE L1 -474 5826 5706 2149 149 32 21 chr10 39588062 39588499 -106000789 + L1MA6 LINE L1 5856 6297 -3 2348 78 0 3 chr10 39588509 39588805 -106000483 + AluY SINE Alu 1 295 -16 1455 94 10 5 chr10 39588922 39589123 -106000165 + AluSp SINE Alu 107 308 -5 2026 149 10 0 chr10 39589123 39589432 -105999856 + AluSx SINE Alu 1 312 0 2276 156 27 20 chr10 39589432 39589928 -105999360 + LTR49-int LTR ERV1 5262 5816 -633 322 141 28 0 chr10 39589952 39590023 -105999265 - AluSp/q SINE Alu 0 303 231 212 290 103 56 chr10 39590863 39590970 -105998318 + L2 LINE L2 3190 3301 -12 209 233 0 0 chr10 39590978 39591021 -105998267 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 2792 16 0 0 chr10 39591232 39591543 -105997745 - AluY SINE Alu 0 311 1 1683 158 30 33 chr10 39592020 39592323 -105996965 + AluJb SINE Alu 1 302 -10 1960 151 10 0 chr10 39592325 39592624 -105996664 + AluSq SINE Alu 1 302 -11 216 0 0 0 chr10 39592625 39592649 -105996639 + (CA)n Simple_repeat Simple_repeat 1 24 0 21 57 0 0 chr10 39592837 39592872 -105996416 + AT_rich Low_complexity Low_complexity 1 35 0 1735 191 0 0 chr10 39592944 39593243 -105996045 + AluJo SINE Alu 1 299 -13 1134 141 0 0 chr10 39593317 39593480 -105995808 + AluSg/x SINE Alu 128 290 -20 207 225 34 146 chr10 39593734 39593823 -105995465 - L2 LINE L2 -1 3312 3234 698 65 11 0 chr10 39594381 39594504 -105994784 - AluSg/x SINE Alu 0 314 191 2102 104 7 4 chr10 39595105 39595430 -105993858 + AluSc SINE Alu 1 326 0 1798 127 4 0 chr10 39595649 39595908 -105993380 - AluSx SINE Alu -15 297 38 21 36 0 0 chr10 39596648 39596676 -105992612 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr10 39597297 39597323 -105991965 + AT_rich Low_complexity Low_complexity 1 26 0 394 319 69 84 chr10 39597327 39597647 -105991641 + L1MEd LINE L1 167 481 -5724 2028 128 7 0 chr10 39597908 39598206 -105991082 + AluSx SINE Alu 1 300 -12 209 233 15 68 chr10 39598372 39598493 -105990795 + A-rich Low_complexity Low_complexity 5 120 -10 1594 111 77 0 chr10 39598493 39598727 -105990561 + AluSc SINE Alu 1 252 -57 209 233 15 68 chr10 39598727 39598738 -105990550 + A-rich Low_complexity Low_complexity 120 130 0 415 342 119 28 chr10 39598752 39599070 -105990218 + L1MEd LINE L1 1108 1336 -4881 2433 77 0 3 chr10 39599070 39599369 -105989919 + AluY SINE Alu 1 298 -13 415 342 119 28 chr10 39599369 39599569 -105989719 + L1MEd LINE L1 1336 1516 -4701 1594 108 97 41 chr10 39599992 39600290 -105988998 + AluSx SINE Alu 1 313 0 2355 71 0 0 chr10 39600489 39600808 -105988480 + AluSg SINE Alu 1 319 0 2015 134 7 3 chr10 39601056 39601346 -105987942 - AluSc SINE Alu -18 291 1 2036 109 51 10 chr10 39601486 39601780 -105987508 + AluSx SINE Alu 1 306 -6 470 300 29 19 chr10 39601782 39601992 -105987296 + L1MEd LINE L1 2703 2914 -3301 26 30 0 0 chr10 39602023 39602056 -105987232 + AT_rich Low_complexity Low_complexity 1 33 0 24 0 0 0 chr10 39602105 39602129 -105987159 + AT_rich Low_complexity Low_complexity 1 24 0 1664 50 0 5 chr10 39602318 39602517 -105986771 + AluY SINE Alu 1 198 -113 26 0 0 0 chr10 39602538 39602564 -105986724 + AT_rich Low_complexity Low_complexity 1 26 0 311 327 13 40 chr10 39602783 39602933 -105986355 - MLT1H LTR MaLR -195 354 209 289 304 16 8 chr10 39603122 39603247 -105986041 + L1MEd LINE L1 3469 3594 -2621 200 233 0 0 chr10 39603862 39603905 -105985383 + A-rich Low_complexity Low_complexity 1 43 0 201 74 0 0 chr10 39604009 39604036 -105985252 + (GA)n Simple_repeat Simple_repeat 2 28 0 2185 113 3 7 chr10 39605844 39606144 -105983144 + AluSg SINE Alu 1 299 -11 656 167 0 25 chr10 39606144 39606255 -105983033 - AluJb SINE Alu -19 293 184 379 212 106 8 chr10 39606388 39606520 -105982768 - MIR SINE MIR 0 262 118 24 32 0 0 chr10 39607730 39607761 -105981527 + AT_rich Low_complexity Low_complexity 1 31 0 2458 74 0 0 chr10 39608425 39608724 -105980564 + AluY SINE Alu 1 299 -12 218 250 231 0 chr10 39609137 39609241 -105980047 + MIR SINE MIR 14 141 -121 2445 74 0 0 chr10 39609858 39610157 -105979131 - AluY SINE Alu -12 299 1 2003 148 0 0 chr10 39610481 39610785 -105978503 + AluSx SINE Alu 1 304 -8 1267 175 58 5 chr10 39611239 39611552 -105977736 - MER33 DNA MER1_type -10 314 1 2301 84 3 0 chr10 39611585 39611882 -105977406 - AluSx SINE Alu -14 298 1 417 39 0 0 chr10 39613125 39613176 -105976112 + (TA)n Simple_repeat Simple_repeat 1 51 0 6628 79 23 0 chr10 39613180 39613571 -105975717 - L1PA8 LINE L1 -5 6167 5787 2475 78 3 0 chr10 39613571 39613879 -105975409 - AluY SINE Alu -2 309 1 6628 79 23 0 chr10 39613879 39614479 -105974809 - L1PA8 LINE L1 -385 5787 5184 1522 96 8 16 chr10 39614479 39614563 -105974725 + L1P LINE L1 4939 5022 -1124 2234 93 33 7 chr10 39614563 39614864 -105974424 + AluSg SINE Alu 1 309 -1 1522 96 8 16 chr10 39614864 39615030 -105974258 + L1P LINE L1 5022 5187 -959 201 349 116 23 chr10 39615048 39615177 -105974111 - MIR3 SINE MIR -10 198 58 497 329 65 22 chr10 39615218 39615558 -105973730 + L2 LINE L2 2748 3101 -212 283 230 31 126 chr10 39615573 39615899 -105973389 - L1M4 LINE L1 -1258 4888 4594 * 311 261 45 9 chr10 39615898 39616009 -105973279 - L1M4 LINE L1 -2492 3654 3540 850 216 39 86 chr10 39616010 39616412 -105972876 + MLT1A2 LTR MaLR 1 457 0 459 276 88 29 chr10 39616527 39617053 -105972235 - L1M4 LINE L1 -2694 3452 2896 369 0 0 0 chr10 39617058 39617099 -105972189 + (TTTC)n Simple_repeat Simple_repeat 2 42 0 2048 150 7 0 chr10 39617102 39617408 -105971880 - AluSc SINE Alu -1 308 1 244 155 0 35 chr10 39617408 39617466 -105971822 - L1M4 LINE L1 -3237 2909 2854 1682 173 0 4 chr10 39617536 39617814 -105971474 + AluJb SINE Alu 11 287 -25 27068 46 4 3 chr10 39617971 39622303 -105966985 + L1PA4 LINE L1 1822 6151 -4 260 300 73 38 chr10 39623074 39623228 -105966060 + MIR3 SINE MIR 13 174 -63 1852 181 32 3 chr10 39623595 39623933 -105965355 - MER7A DNA MER2_type 0 346 1 2417 73 0 0 chr10 39624385 39624685 -105964603 + AluY SINE Alu 1 300 -11 1143 245 72 92 chr10 39624744 39625756 -105963532 + L1MC4 LINE L1 7060 7995 0 258 327 82 31 chr10 39626963 39627039 -105962249 - L2 LINE L2 -11 3302 3231 2735 132 5 30 chr10 39627039 39627478 -105961810 + MSTA LTR MaLR 1 428 0 258 327 82 31 chr10 39627478 39627560 -105961728 - L2 LINE L2 -82 3231 3136 1437 167 155 20 chr10 39627875 39628217 -105961071 + MLT1B LTR MaLR 1 388 -2 25 0 0 0 chr10 39628477 39628502 -105960786 + AT_rich Low_complexity Low_complexity 1 25 0 212 276 0 23 chr10 39629023 39629110 -105960178 + (TA)n Simple_repeat Simple_repeat 1 85 0 29 28 0 0 chr10 39629257 39629293 -105959995 + AT_rich Low_complexity Low_complexity 1 36 0 411 187 0 0 chr10 39629361 39629468 -105959820 + (CA)n Simple_repeat Simple_repeat 1 107 0 40749 48 6 1 chr10 39630691 39636810 -105952478 + L1PA4 LINE L1 2 6154 -1 24 77 0 0 chr10 39637317 39637369 -105951919 + AT_rich Low_complexity Low_complexity 1 52 0 251 154 15 0 chr10 39637581 39637646 -105951642 + (TA)n Simple_repeat Simple_repeat 1 66 0 183 129 0 0 chr10 39638436 39638467 -105950821 + (TA)n Simple_repeat Simple_repeat 1 31 0 297 51 0 0 chr10 39638531 39638570 -105950718 + (TCTA)n Simple_repeat Simple_repeat 3 41 0 332 289 15 0 chr10 39638571 39638706 -105950582 + (TA)n Simple_repeat Simple_repeat 2 138 0 1899 112 0 8 chr10 39639313 39639573 -105949715 + AluSx SINE Alu 41 298 -14 206 213 27 13 chr10 39640178 39640253 -105949035 + (TAAA)n Simple_repeat Simple_repeat 3 78 0 346 287 16 0 chr10 39640323 39640505 -105948783 + (TA)n Simple_repeat Simple_repeat 1 184 0 217 241 12 24 chr10 39640475 39640558 -105948730 + (CA)n Simple_repeat Simple_repeat 2 83 0 * 189 74 0 0 chr10 39641160 39641187 -105948101 + (CA)n Simple_repeat Simple_repeat 2 28 0 2165 191 63 35 chr10 39641190 39641765 -105947523 + LTR49 LTR ERV1 5 595 0 293 242 10 10 chr10 39641765 39641926 -105947362 + (TA)n Simple_repeat Simple_repeat 1 161 0 2279 104 0 16 chr10 39641992 39642309 -105946979 - AluSx SINE Alu 0 312 1 258 206 29 0 chr10 39644268 39644336 -105944952 - LTR24C LTR ERV1 -10 625 556 234 310 0 10 chr10 39644707 39644807 -105944481 + (TA)n Simple_repeat Simple_repeat 2 100 0 2188 112 0 3 chr10 39645117 39645412 -105943876 - AluSq SINE Alu -19 294 1 848 292 73 27 chr10 39645614 39645830 -105943458 + MLT1J LTR MaLR 1 206 -305 238 67 44 0 chr10 39645830 39645875 -105943413 + T-rich Low_complexity Low_complexity 2 48 0 848 292 73 27 chr10 39645875 39646137 -105943151 + MLT1J LTR MaLR 206 501 -10 1613 171 49 11 chr10 39647070 39647357 -105941931 - AluJo SINE Alu -14 298 1 2196 113 3 10 chr10 39647866 39648177 -105941111 + AluSc SINE Alu 1 309 0 33 0 0 0 chr10 39648736 39648769 -105940519 + AT_rich Low_complexity Low_complexity 1 33 0 25 31 0 0 chr10 39648809 39648841 -105940447 + AT_rich Low_complexity Low_complexity 1 32 0 228 35 0 0 chr10 39648994 39649023 -105940265 + (CAAAA)n Simple_repeat Simple_repeat 3 31 0 218 179 0 0 chr10 39649399 39649438 -105939850 + CT-rich Low_complexity Low_complexity 2 40 0 23 78 0 0 chr10 39649683 39649734 -105939554 + AT_rich Low_complexity Low_complexity 1 51 0 21 0 0 0 chr10 39650107 39650128 -105939160 + AT_rich Low_complexity Low_complexity 1 21 0 942 218 39 4 chr10 39650139 39650396 -105938892 - L1MC3 LINE L1 -7 7778 7513 430 320 17 0 chr10 39652376 39652548 -105936740 - MIR SINE MIR -15 247 73 546 297 161 0 chr10 39652849 39653004 -105936284 - MER5A DNA MER1_type -1 188 9 264 256 13 0 chr10 39653012 39653090 -105936198 - ERVL LTR ERVL -2942 2822 2744 1771 218 34 8 chr10 39653595 39653981 -105935307 + MSTD LTR MaLR 1 396 0 640 219 8 0 chr10 39654251 39654370 -105934918 - FLAM_A SINE Alu -13 120 1 250 313 0 38 chr10 39654370 39654491 -105934797 + LTR67 LTR ERVL 417 534 -23 2402 57 0 23 chr10 39654883 39655184 -105934104 + AluY SINE Alu 1 294 -17 2134 101 7 7 chr10 39655314 39655621 -105933667 - AluY SINE Alu -4 307 1 1101 157 131 0 chr10 39657672 39657863 -105931425 - AluJo SINE Alu -15 297 82 2120 103 10 3 chr10 39658003 39658293 -105930995 - AluSq SINE Alu -21 292 1 450 294 65 49 chr10 39658465 39658649 -105930639 - MIR SINE MIR -68 194 8 1942 92 0 4 chr10 39658728 39658978 -105930310 + AluSx SINE Alu 1 249 -63 2084 123 0 0 chr10 39658979 39659272 -105930016 + AluSq SINE Alu 13 305 -8 292 259 33 33 chr10 39659376 39659580 -105929708 - L1ME LINE L1 -276 5894 5691 2542 57 0 0 chr10 39659641 39659940 -105929348 - AluY SINE Alu -12 299 1 1597 220 40 14 chr10 39662073 39662496 -105926792 - MER31B LTR ERV1 -31 435 2 595 140 10 0 chr10 39662599 39662699 -105926589 - MLT1E1 LTR MaLR -31 623 523 2251 102 0 7 chr10 39664190 39664494 -105924794 + AluSg SINE Alu 1 302 -8 505 215 71 92 chr10 39664677 39665003 -105924285 - MER114 LTR ERV -284 364 46 2170 102 0 3 chr10 39665206 39665539 -105923749 - AluY SINE Alu 0 332 1 27 62 0 0 chr10 39665693 39665741 -105923547 + AT_rich Low_complexity Low_complexity 1 48 0 2201 85 0 36 chr10 39665997 39666303 -105922985 + AluY SINE Alu 2 296 -15 2201 117 0 3 chr10 39666557 39666856 -105922432 - AluSx SINE Alu -14 298 1 1655 156 46 23 chr10 39667229 39667531 -105921757 + AluJb SINE Alu 4 312 0 524 236 0 39 chr10 39668151 39668278 -105921010 - FLAM_A SINE Alu -15 127 6 210 71 0 0 chr10 39668294 39668322 -105920966 + (CATTT)n Simple_repeat Simple_repeat 3 30 0 1256 223 37 7 chr10 39668322 39668591 -105920697 - AluJb SINE Alu -29 283 7 180 0 0 0 chr10 39669551 39669571 -105919717 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1446 173 53 50 chr10 39669842 39670143 -105919145 - AluJo SINE Alu 0 312 11 180 347 196 21 chr10 39670214 39670597 -105918691 - L2 LINE L2 -2238 1076 627 1052 311 94 24 chr10 39670651 39671152 -105918136 + MLT1H LTR MaLR 14 549 0 2718 48 3 0 chr10 39672417 39672752 -105916536 - L1PA4 LINE L1 0 6155 5820 5611 200 38 30 chr10 39672752 39672844 -105916444 + L1MB1 LINE L1 3850 3940 -2249 2011 159 27 14 chr10 39672844 39673214 -105916074 + THE1C LTR MaLR 1 375 0 5611 200 38 30 chr10 39673214 39675245 -105914043 + L1MB1 LINE L1 3940 5989 -200 569 254 12 12 chr10 39675243 39675487 -105913801 + L1M4 LINE L1 2257 2500 -3646 * 1117 153 22 18 chr10 39675507 39675736 -105913552 - Tigger2 DNA MER2_type -25 2693 2464 3566 181 23 20 chr10 39675799 39676010 -105913278 - Tigger2 DNA MER2_type -1974 744 535 2022 120 53 0 chr10 39676010 39676294 -105912994 - AluSq SINE Alu -14 299 1 3566 181 23 20 chr10 39676294 39676824 -105912464 - Tigger2 DNA MER2_type -2183 535 1 449 248 45 41 chr10 39676822 39677151 -105912137 - MLT1C LTR MaLR 0 467 54 * 503 283 34 42 chr10 39677218 39677394 -105911894 + L1M4 LINE L1 2558 2734 -3412 1701 151 34 14 chr10 39677394 39677686 -105911602 + AluJb SINE Alu 1 298 -14 503 283 34 42 chr10 39677686 39677741 -105911547 + L1M4 LINE L1 2734 2789 -3357 453 36 0 0 chr10 39677741 39677796 -105911492 + (TA)n Simple_repeat Simple_repeat 2 56 0 503 283 34 42 chr10 39677796 39677828 -105911460 + L1M4 LINE L1 2789 2820 -3326 1980 118 25 0 chr10 39677840 39678120 -105911168 + AluSx SINE Alu 5 291 -21 315 0 0 0 chr10 39678129 39678164 -105911124 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1805 172 0 3 chr10 39678213 39678516 -105910772 - AluJb SINE Alu -10 302 1 244 155 0 35 chr10 39678576 39678634 -105910654 + L1M4 LINE L1 2854 2909 -3237 2053 150 7 0 chr10 39678634 39678940 -105910348 + AluSc SINE Alu 1 308 -1 369 0 0 0 chr10 39678943 39678984 -105910304 + (GAAA)n Simple_repeat Simple_repeat 2 42 0 459 276 88 29 chr10 39678989 39679515 -105909773 + L1M4 LINE L1 2896 3452 -2694 850 216 39 86 chr10 39679630 39680032 -105909256 - MLT1A2 LTR MaLR 0 457 1 311 261 45 9 chr10 39680033 39680144 -105909144 + L1M4 LINE L1 3540 3654 -2492 283 230 31 126 chr10 39680143 39680469 -105908819 + L1M4 LINE L1 4594 4888 -1258 * 497 329 65 22 chr10 39680484 39680824 -105908464 - L2 LINE L2 -212 3101 2748 201 349 116 23 chr10 39680865 39680994 -105908294 + MIR3 SINE MIR 58 198 -10 39107 51 7 0 chr10 39681010 39686165 -105903123 - L1P LINE L1 -956 5190 2 393 191 0 0 chr10 39687388 39687493 -105901795 + (TG)n Simple_repeat Simple_repeat 1 105 0 29 28 0 0 chr10 39687561 39687597 -105901691 + AT_rich Low_complexity Low_complexity 1 36 0 212 276 0 23 chr10 39687744 39687831 -105901457 + (TA)n Simple_repeat Simple_repeat 2 86 0 25 0 0 0 chr10 39688352 39688377 -105900911 + AT_rich Low_complexity Low_complexity 1 25 0 1437 167 155 20 chr10 39688637 39688979 -105900309 - MLT1B LTR MaLR -2 388 1 258 327 82 31 chr10 39689294 39689376 -105899912 + L2 LINE L2 3136 3212 -101 2735 132 5 30 chr10 39689376 39689815 -105899473 - MSTA LTR MaLR 0 428 1 258 327 82 31 chr10 39689815 39689891 -105899397 + L2 LINE L2 3212 3302 -11 1196 245 68 91 chr10 39691098 39692114 -105897174 - L1MD3 LINE L1 0 8041 7060 2417 73 0 0 chr10 39692173 39692473 -105896815 - AluY SINE Alu -11 300 1 1852 181 32 3 chr10 39692925 39693263 -105896025 + MER7A DNA MER2_type 1 346 0 260 300 73 38 chr10 39693630 39693784 -105895504 - MIR3 SINE MIR -63 145 13 36537 55 4 8 chr10 39694555 39698872 -105890416 - L1PA4 LINE L1 -4 6151 1873 4505 35 4 0 chr10 39698872 39699412 -105889876 + L1PA2 LINE L1 5610 6151 -4 36537 55 4 8 chr10 39699412 39701268 -105888020 - L1PA4 LINE L1 -4282 1873 11 2227 89 0 0 chr10 39701275 39701556 -105887732 - AluY SINE Alu -19 292 12 466 349 64 18 chr10 39702310 39702528 -105886760 + MIR SINE MIR 31 258 -4 194 83 56 0 chr10 39702775 39702811 -105886477 + (CAGAGA)n Simple_repeat Simple_repeat 4 41 0 195 314 189 7 chr10 39702924 39703077 -105886211 - MIR SINE MIR -32 230 50 191 302 0 0 chr10 39703831 39703874 -105885414 - L2 LINE L2 -21 3251 3209 218 330 73 46 chr10 39704184 39704293 -105884995 - MIR SINE MIR 0 262 151 276 340 35 40 chr10 39704547 39704642 -105884646 + MIR SINE MIR 54 148 -114 2282 109 13 0 chr10 39704642 39704945 -105884343 + AluSx SINE Alu 1 307 -5 276 340 35 40 chr10 39704945 39705049 -105884239 + MIR SINE MIR 148 252 -10 335 245 43 32 chr10 39705183 39705277 -105884011 - MER5A DNA MER1_type -83 106 12 21 0 0 0 chr10 39705436 39705457 -105883831 + AT_rich Low_complexity Low_complexity 1 21 0 2165 123 3 3 chr10 39705458 39705768 -105883520 + AluSp SINE Alu 1 310 -3 2328 65 0 29 chr10 39705866 39706176 -105883112 - AluY SINE Alu -10 301 1 584 214 124 126 chr10 39706361 39706560 -105882728 + MLT1E2 LTR MaLR 122 365 -289 6881 51 0 0 chr10 39706591 39707806 -105881482 - L1PA6 LINE L1 -2 6152 4921 401 282 82 33 chr10 39708148 39708393 -105880895 - MIR SINE MIR -3 259 3 330 273 8 31 chr10 39709002 39709130 -105880158 + CT-rich Low_complexity Low_complexity 3 127 0 345 250 171 24 chr10 39710297 39710461 -105878827 - MIR SINE MIR -72 190 3 21 100 0 0 chr10 39710596 39710666 -105878622 + AT_rich Low_complexity Low_complexity 1 70 0 225 313 53 52 chr10 39711470 39711691 -105877597 + MIR SINE MIR 30 248 -14 1661 230 38 26 chr10 39711944 39712475 -105876813 + L1ME1 LINE L1 5625 6161 -5 229 271 173 38 chr10 39712652 39712785 -105876503 - MIR SINE MIR -108 154 4 339 44 0 0 chr10 39712843 39712888 -105876400 + (CA)n Simple_repeat Simple_repeat 2 46 0 727 251 48 91 chr10 39713007 39713445 -105875843 + MLT1J1 LTR MaLR 28 446 0 1298 263 49 7 chr10 39713482 39713893 -105875395 - MER57B LTR ERV1 -6 428 1 275 50 25 0 chr10 39714983 39715023 -105874265 + MADE1 DNA Mariner 1 41 -39 349 347 72 0 chr10 39715605 39715772 -105873516 + MIR SINE MIR 76 254 -8 2215 84 61 7 chr10 39716902 39717199 -105872089 + AluSq SINE Alu 1 313 0 1346 145 41 5 chr10 39717563 39717784 -105871504 + MER30 DNA MER1_type 2 230 0 340 263 74 0 chr10 39717864 39717959 -105871329 - L2 LINE L2 -4 3309 3208 643 249 37 6 chr10 39719068 39719344 -105869944 - MER2 DNA MER2_type -1 344 1 2460 61 3 0 chr10 39719476 39719773 -105869515 - AluY SINE Alu -9 302 5 342 336 114 0 chr10 39720064 39720195 -105869093 + MIR3 SINE MIR 54 199 -9 215 338 61 47 chr10 39721654 39721802 -105867486 + L2 LINE L2 3106 3255 -17 476 318 30 25 chr10 39721948 39722146 -105867142 - MIR SINE MIR -6 256 58 215 203 17 0 chr10 39722203 39722262 -105867026 + (TG)n Simple_repeat Simple_repeat 2 61 0 1554 109 47 33 chr10 39722525 39722799 -105866489 - L1PA13 LINE L1 -18 6145 5868 2243 106 0 0 chr10 39722799 39723120 -105866168 + L1P4 LINE L1 5445 5765 -398 201 321 0 0 chr10 39723968 39724024 -105865264 + L2 LINE L2 3000 3055 -217 194 339 46 0 chr10 39724174 39724239 -105865049 + L2 LINE L2 3241 3308 -5 25 0 0 0 chr10 39725657 39725682 -105863606 + AT_rich Low_complexity Low_complexity 1 25 0 286 247 0 12 chr10 39726044 39726129 -105863159 + (TA)n Simple_repeat Simple_repeat 1 84 0 1809 119 0 12 chr10 39726253 39726505 -105862783 - AluSc SINE Alu -60 249 1 27 0 0 0 chr10 39726999 39727026 -105862262 + AT_rich Low_complexity Low_complexity 1 27 0 2388 91 0 0 chr10 39727351 39727649 -105861639 - AluY SINE Alu -13 298 1 218 346 23 38 chr10 39728395 39728528 -105860760 - MIR SINE MIR -10 252 122 2308 126 3 50 chr10 39728563 39728639 -105860649 - THE1B LTR MaLR 0 364 286 2161 101 0 54 chr10 39728639 39728955 -105860333 + AluSq SINE Alu 1 299 -14 2308 126 3 50 chr10 39728955 39729260 -105860028 - THE1B LTR MaLR -78 286 1 201 74 0 0 chr10 39729674 39729701 -105859587 + (T)n Simple_repeat Simple_repeat 1 27 0 1776 121 10 42 chr10 39730176 39730483 -105858805 + AluY SINE Alu 1 297 -14 207 219 0 0 chr10 39732151 39732192 -105857096 - MIR3 SINE MIR -53 155 115 1411 200 8 95 chr10 39732196 39732596 -105856692 - MLT1A1 LTR MaLR 0 365 1 1415 222 26 36 chr10 39733093 39733512 -105855776 - MLT1C LTR MaLR 0 467 53 180 200 0 0 chr10 39734066 39734106 -105855182 + CT-rich Low_complexity Low_complexity 2 41 0 1752 164 33 41 chr10 39734234 39734600 -105854688 + MLT1A1 LTR MaLR 1 363 -2 438 311 47 16 chr10 39734645 39734835 -105854453 - MIR SINE MIR -46 216 21 229 236 56 14 chr10 39735227 39735299 -105853989 - MIR SINE MIR -69 193 119 211 206 33 98 chr10 39735302 39735394 -105853894 - L3 LINE CR1 -166 1411 1326 215 344 54 11 chr10 39735580 39735673 -105853615 - L2 LINE L2 -4 3268 3172 223 93 256 0 chr10 39735792 39735835 -105853453 - MIR3 SINE MIR -33 175 122 526 239 29 58 chr10 39736177 39736382 -105852906 + MER20 DNA MER1_type 1 199 -20 242 220 68 0 chr10 39736581 39736640 -105852648 + L2 LINE L2 3209 3271 -1 2234 111 3 3 chr10 39736747 39737044 -105852244 - AluSc SINE Alu -12 297 1 699 65 11 0 chr10 39737645 39737768 -105851520 + AluSg/x SINE Alu 191 314 0 207 225 34 146 chr10 39738326 39738415 -105850873 + L2 LINE L2 3234 3312 -1 1065 147 0 0 chr10 39738651 39738833 -105850455 - AluSg/x SINE Alu 0 311 130 1757 187 0 0 chr10 39738907 39739206 -105850082 - AluJo SINE Alu -13 299 1 21 57 0 0 chr10 39739278 39739313 -105849975 + AT_rich Low_complexity Low_complexity 1 35 0 216 0 0 0 chr10 39739501 39739525 -105849763 + (TG)n Simple_repeat Simple_repeat 1 24 0 2036 141 10 0 chr10 39739526 39739825 -105849463 - AluSq SINE Alu -11 302 1 1683 158 30 33 chr10 39739827 39740130 -105849158 - AluJb SINE Alu -10 302 1 2792 16 0 0 chr10 39740607 39740918 -105848370 + AluY SINE Alu 1 311 0 209 233 0 0 chr10 39741129 39741172 -105848116 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 212 290 103 56 chr10 39741180 39741287 -105848001 - L2 LINE L2 -12 3301 3190 733 169 8 0 chr10 39743475 39743593 -105845695 + FLAM_C SINE Alu 3 121 -12 505 131 0 24 chr10 39743623 39743707 -105845581 + AluJb SINE Alu 212 293 -19 301 276 9 57 chr10 39743811 39743916 -105845372 + L2 LINE L2 2221 2320 -994 270 284 67 45 chr10 39744115 39744249 -105845039 + L2 LINE L2 2644 2780 -534 1344 140 0 5 chr10 39744670 39744891 -105844397 - pTR5 LTR ERV1 -2047 391 172 270 258 21 0 chr10 39744894 39744991 -105844297 - LTR30 LTR ERV1 -80 642 544 4698 146 76 26 chr10 39744992 39746081 -105843207 - pTR5 LTR ERV1 -439 1798 57 29 70 0 0 chr10 39746166 39746223 -105843065 + AT_rich Low_complexity Low_complexity 1 57 0 660 150 60 51 chr10 39746367 39746566 -105842722 - MER6 DNA MER2_type 0 865 -65 243 0 0 0 chr10 39746801 39746828 -105842460 + (TG)n Simple_repeat Simple_repeat 2 28 0 1222 163 6 139 chr10 39746998 39747336 -105841952 + AluJb SINE Alu 10 302 -10 2350 68 3 13 chr10 39748083 39748393 -105840895 - AluY SINE Alu -4 307 1 376 282 112 12 chr10 39749180 39749350 -105839938 + MIR SINE MIR 21 207 -55 857 219 0 12 chr10 39750673 39750833 -105838455 + FRAM SINE Alu 2 159 -7 530 117 0 0 chr10 39751282 39751359 -105837929 - AluS SINE Alu -236 77 1 406 104 45 0 chr10 39751381 39751448 -105837840 - MER41B LTR ERV1 -87 548 479 1963 127 29 23 chr10 39751599 39751907 -105837381 + AluY SINE Alu 1 310 -1 21 36 0 0 chr10 39752104 39752132 -105837156 + AT_rich Low_complexity Low_complexity 1 28 0 564 268 109 5 chr10 39752599 39752819 -105836469 + L1ME3A LINE L1 5364 5606 -556 682 271 21 50 chr10 39752927 39753267 -105836021 + L1ME3A LINE L1 5611 5940 -230 295 338 52 42 chr10 39754603 39754816 -105834472 + MIR SINE MIR 20 234 -28 219 204 0 0 chr10 39755355 39755399 -105833889 - L2 LINE L2 -7 3306 3263 313 369 72 22 chr10 39755509 39755731 -105833557 + MIR SINE MIR 4 236 -26 623 325 26 18 chr10 39757182 39757410 -105831878 - MIR SINE MIR -30 232 3 189 214 0 54 chr10 39757619 39757675 -105831613 + MIR SINE MIR 203 255 -7 44 35 0 0 chr10 39758881 39758939 -105830349 + AT_rich Low_complexity Low_complexity 1 58 0 335 313 15 80 chr10 39758946 39759147 -105830141 - HAL1 LINE L1 -96 2411 2224 386 287 174 6 chr10 39760680 39760847 -105828441 - MIR SINE MIR -34 228 34 318 326 56 0 chr10 39761029 39761118 -105828170 - L2 LINE L2 -36 3236 3143 627 267 87 20 chr10 39761154 39761349 -105827939 - MLT1J2 LTR MaLR 0 450 243 492 222 28 9 chr10 39761360 39761468 -105827820 - MLT1J2 LTR MaLR -340 110 1 3928 190 57 8 chr10 39761673 39762424 -105826864 - MER21B LTR ERV1 -75 788 1 188 333 126 0 chr10 39762424 39762559 -105826729 - L2 LINE L2 -61 3252 3101 24 0 0 0 chr10 39762764 39762788 -105826500 + AT_rich Low_complexity Low_complexity 1 24 0 201 286 209 0 chr10 39763040 39763145 -105826143 - L2 LINE L2 -842 2472 2346 23 0 0 0 chr10 39763249 39763272 -105826016 + AT_rich Low_complexity Low_complexity 1 23 0 221 326 111 7 chr10 39763387 39763522 -105825766 - MIR SINE MIR -70 192 44 32 86 0 0 chr10 39763781 39763862 -105825426 + AT_rich Low_complexity Low_complexity 1 81 0 194 319 77 44 chr10 39764198 39764289 -105824999 - L2 LINE L2 0 3272 3179 448 248 18 9 chr10 39764377 39764486 -105824802 - L2 LINE L2 -5 3308 3199 2011 107 68 0 chr10 39764487 39764768 -105824520 - AluSc SINE Alu -9 300 1 216 0 0 0 chr10 39764778 39764802 -105824486 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 911 74 8 0 chr10 39764806 39764928 -105824360 - L1P3 LINE L1 -574 5598 5476 4415 37 4 4 chr10 39764928 39765463 -105823825 + L1PA8 LINE L1 5635 6171 -1 252 340 215 0 chr10 39765555 39765699 -105823589 - L2 LINE L2 -296 3017 2843 279 304 22 0 chr10 39765834 39765926 -105823362 + (TATATG)n Simple_repeat Simple_repeat 1 94 0 233 276 17 0 chr10 39765928 39765986 -105823302 + GA-rich Low_complexity Low_complexity 3 61 0 308 230 53 53 chr10 39765988 39766101 -105823187 + L1MD3 LINE L1 7656 7980 -15 417 282 123 21 chr10 39766149 39766348 -105822940 + MIR SINE MIR 36 261 -1 303 364 33 0 chr10 39766503 39766624 -105822664 - L2 LINE L2 -11 3261 3137 280 318 15 145 chr10 39767055 39767455 -105821833 - L3 LINE CR1 -229 1348 1001 24 32 0 0 chr10 39767548 39767579 -105821709 + AT_rich Low_complexity Low_complexity 1 31 0 1597 196 141 0 chr10 39767972 39768319 -105820969 + MSTD LTR MaLR 1 396 0 388 339 85 22 chr10 39768608 39768832 -105820456 - MIR SINE MIR 0 262 25 482 327 84 63 chr10 39768854 39769236 -105820052 - L2 LINE L2 -7 3306 2917 2147 221 75 0 chr10 39770003 39770473 -105818815 - MLT1D LTR MaLR 0 505 1 411 318 39 31 chr10 39770731 39770989 -105818299 - MIR SINE MIR 0 262 3 707 256 163 0 chr10 39772428 39772631 -105816657 - MIR SINE MIR -25 237 2 2129 135 3 0 chr10 39773347 39773650 -105815638 + AluSx SINE Alu 1 304 -8 2757 222 50 12 chr10 39773781 39774636 -105814652 + L1MB7 LINE L1 5281 6168 -16 1442 175 73 110 chr10 39775262 39775725 -105813563 + MLT1D LTR MaLR 1 446 -59 6613 152 18 14 chr10 39775752 39777964 -105811324 + L1MA4 LINE L1 4082 6300 0 351 65 0 0 chr10 39779023 39779069 -105810219 + (CAAT)n Simple_repeat Simple_repeat 2 47 0 354 326 74 0 chr10 39780292 39780427 -105808861 - MIR SINE MIR -47 215 71 247 264 88 0 chr10 39780478 39780569 -105808719 - MIR SINE MIR -70 192 94 1467 131 146 11 chr10 39781160 39781427 -105807861 + AluSq SINE Alu 1 303 0 1406 248 35 5 chr10 39782526 39782666 -105806622 + MLT1C LTR MaLR 53 187 -280 501 17 0 0 chr10 39782666 39782724 -105806564 + (CA)n Simple_repeat Simple_repeat 2 59 0 1406 248 35 5 chr10 39782724 39782978 -105806310 + MLT1C LTR MaLR 187 459 -8 297 311 54 81 chr10 39783129 39783351 -105805937 - MIR SINE MIR -11 251 36 194 350 144 21 chr10 39784735 39785123 -105804165 + L2 LINE L2 2451 2886 -428 2439 81 0 0 chr10 39785242 39785539 -105803749 + AluSg1 SINE Alu 1 297 -12 1975 145 14 0 chr10 39785747 39786037 -105803251 - MER1B DNA MER1_type 0 339 46 1357 214 83 36 chr10 39786357 39786693 -105802595 + MLT1A2 LTR MaLR 23 374 0 191 368 35 21 chr10 39787509 39787653 -105801635 - L2 LINE L2 0 3313 3168 239 341 0 12 chr10 39787848 39787930 -105801358 + MIR3 SINE MIR 15 95 -113 396 268 30 61 chr10 39788113 39788277 -105801011 - MER5B DNA MER1_type -1 177 19 216 376 112 35 chr10 39788424 39788482 -105800806 + L2 LINE L2 2906 2958 -314 2004 155 0 3 chr10 39788482 39788791 -105800497 - AluSc SINE Alu -1 308 1 216 376 112 35 chr10 39788791 39789072 -105800216 + L2 LINE L2 2958 3271 -1 4030 136 91 77 chr10 39789798 39790863 -105798425 - pTR5 LTR ERV1 0 2438 1131 180 200 0 0 chr10 39791612 39791652 -105797636 + CT-rich Low_complexity Low_complexity 2 41 0 1758 164 33 41 chr10 39791780 39792146 -105797142 + MLT1A1 LTR MaLR 1 363 -2 442 311 47 16 chr10 39792191 39792381 -105796907 - MIR SINE MIR -46 216 21 232 236 56 14 chr10 39792773 39792845 -105796443 - MIR SINE MIR -69 193 119 213 206 33 98 chr10 39792848 39792940 -105796348 - L3 LINE CR1 -166 1411 1326 218 344 54 11 chr10 39793126 39793219 -105796069 - L2 LINE L2 -4 3268 3172 220 93 256 0 chr10 39793338 39793381 -105795907 - MIR3 SINE MIR -33 175 122 591 239 29 58 chr10 39793723 39793928 -105795360 + MER20 DNA MER1_type 1 199 -20 243 220 68 0 chr10 39794127 39794186 -105795102 + L2 LINE L2 3209 3271 -1 2235 91 3 0 chr10 39794294 39794581 -105794707 - AluSq SINE Alu -12 301 14 1171 27 0 14 chr10 39794581 39794729 -105794559 + L1PA4 LINE L1 6009 6154 -1 24 77 0 0 chr10 39795236 39795288 -105794000 + AT_rich Low_complexity Low_complexity 1 52 0 251 154 15 0 chr10 39795500 39795565 -105793723 + (TA)n Simple_repeat Simple_repeat 1 66 0 183 129 0 0 chr10 39796355 39796386 -105792902 + (TA)n Simple_repeat Simple_repeat 2 32 0 297 51 0 0 chr10 39796450 39796489 -105792799 + (TCTA)n Simple_repeat Simple_repeat 3 41 0 332 289 15 0 chr10 39796490 39796625 -105792663 + (TA)n Simple_repeat Simple_repeat 2 138 0 1851 111 0 11 chr10 39797232 39797493 -105791795 + AluSx SINE Alu 41 298 -14 206 213 27 13 chr10 39798098 39798173 -105791115 + (TAAA)n Simple_repeat Simple_repeat 3 78 0 346 287 16 0 chr10 39798243 39798425 -105790863 + (TA)n Simple_repeat Simple_repeat 1 184 0 217 241 12 24 chr10 39798395 39798478 -105790810 + (CA)n Simple_repeat Simple_repeat 2 83 0 * 194 83 56 0 chr10 39799104 39799140 -105790148 + (TCTCTG)n Simple_repeat Simple_repeat 4 41 0 476 349 64 18 chr10 39799387 39799605 -105789683 - MIR SINE MIR -4 258 31 2225 89 0 0 chr10 39800359 39800640 -105788648 + AluY SINE Alu 12 292 -19 10559 84 6 0 chr10 39800647 39802471 -105786817 + L1P LINE L1 11 1842 -4304 180 0 0 0 chr10 39802471 39802491 -105786797 + (T)n Simple_repeat Simple_repeat 1 20 0 43544 49 6 1 chr10 39802500 39808623 -105780665 - L1PA2 LINE L1 0 6155 1 349 363 51 39 chr10 39910134 39910324 -105678964 - L1ME4a LINE L1 -38 6083 5897 2313 101 0 0 chr10 39910324 39910631 -105678657 - AluSg SINE Alu -3 307 1 2148 132 0 0 chr10 39910633 39910943 -105678345 - AluSx SINE Alu -2 310 1 349 363 51 39 chr10 39910943 39910983 -105678305 - L1ME4a LINE L1 -224 5897 5847 337 232 20 10 chr10 39911198 39911297 -105677991 + L1MC4a LINE L1 5844 5943 -1865 1308 217 45 67 chr10 39911311 39911712 -105677576 + MLT1I LTR MaLR 16 407 -2 1782 126 49 7 chr10 39911813 39912099 -105677189 - AluSq SINE Alu -15 298 1 21 36 0 0 chr10 39912103 39912131 -105677157 + AT_rich Low_complexity Low_complexity 1 28 0 673 114 0 141 chr10 39912131 39912248 -105677040 + AluSg/x SINE Alu 182 275 -37 216 86 0 0 chr10 39912248 39912283 -105677005 + (TTAA)n Simple_repeat Simple_repeat 2 36 0 673 114 0 141 chr10 39912283 39912314 -105676974 + AluSg/x SINE Alu 275 309 -3 533 161 0 11 chr10 39912320 39912407 -105676881 - FLAM_C SINE Alu -23 120 35 324 270 36 0 chr10 39912873 39913010 -105676278 - L1MC4 LINE L1 0 8042 7901 1898 132 0 65 chr10 39913016 39913138 -105676150 + AluJb SINE Alu 1 129 -183 320 0 25 0 chr10 39913138 39913178 -105676110 + (CAA)n Simple_repeat Simple_repeat 2 42 0 1898 132 0 65 chr10 39913178 39913380 -105675908 + AluJb SINE Alu 129 304 -8 2267 95 7 3 chr10 39913381 39913685 -105675603 + AluSq SINE Alu 2 306 -7 484 95 0 0 chr10 39913685 39913748 -105675540 + Alu SINE Alu 2 64 -245 388 314 63 51 chr10 39913873 39913986 -105675302 - L1MC4 LINE L1 -306 7736 7619 2412 66 0 3 chr10 39913986 39914291 -105674997 - AluY SINE Alu -7 304 1 388 314 63 51 chr10 39914291 39914352 -105674936 - L1MC4 LINE L1 -423 7619 7560 881 99 41 0 chr10 39914390 39914511 -105674777 - FLAM_C SINE Alu -7 126 1 510 273 7 7 chr10 39914514 39914657 -105674631 - L1MC4 LINE L1 -454 7588 7446 1543 172 0 22 chr10 39914748 39915016 -105674272 - AluJo SINE Alu -50 262 1 415 129 0 0 chr10 39915016 39915078 -105674210 - MLT1B LTR MaLR -53 337 276 261 220 0 0 chr10 39915073 39915123 -105674165 - AluJ/monomer SINE Alu -250 50 1 * 311 193 12 24 chr10 39915123 39915206 -105674082 - L1MC4 LINE L1 -766 7276 7195 2055 129 20 0 chr10 39915206 39915500 -105673788 - AluSg SINE Alu -10 300 1 240 242 32 0 chr10 39915730 39915792 -105673496 - L1ME LINE L1 -299 5822 5759 5086 153 138 23 chr10 39915795 39916941 -105672347 - MER52C LTR ERV1 0 1278 1 231 317 20 0 chr10 39916941 39917042 -105672246 - L1ME LINE L1 -363 5758 5656 2300 97 3 0 chr10 39917043 39917352 -105671936 - AluSg SINE Alu 0 310 1 421 133 0 0 chr10 39917358 39917418 -105671870 - AluS SINE Alu -258 60 1 447 67 0 0 chr10 39917424 39917484 -105671804 - Alu SINE Alu -258 60 1 373 326 51 69 chr10 39918137 39918241 -105671047 + L2 LINE L2 2909 3010 -303 1942 133 0 42 chr10 39918241 39918550 -105670738 - AluSx SINE Alu -16 296 1 373 326 51 69 chr10 39918550 39918620 -105670668 + L2 LINE L2 3010 3080 -233 1796 95 0 4 chr10 39918620 39918861 -105670427 + AluSg SINE Alu 1 240 -70 1344 92 0 20 chr10 39918961 39919157 -105670131 - AluSx SINE Alu -120 192 1 244 335 38 65 chr10 39919282 39919483 -105669805 + L2 LINE L2 2545 2733 -581 2496 61 3 0 chr10 39919483 39919793 -105669495 + AluY SINE Alu 1 311 0 244 335 38 65 chr10 39919793 39919961 -105669327 + L2 LINE L2 2733 2904 -410 1348 167 0 0 chr10 39920014 39920236 -105669052 + AluJb SINE Alu 1 222 -90 449 129 0 0 chr10 39920336 39920398 -105668890 + AluS SINE Alu 231 292 -18 2079 92 6 60 chr10 39920411 39920726 -105668562 + AluSg SINE Alu 3 300 -10 1883 164 0 3 chr10 39920788 39921081 -105668207 - AluJb SINE Alu -14 298 7 275 278 0 33 chr10 39921103 39921193 -105668095 - MER81 DNA DNA -7 107 21 566 257 7 21 chr10 39921193 39921333 -105667955 + L2 LINE L2 3176 3313 0 951 181 5 27 chr10 39921577 39921765 -105667523 - AluJ SINE Alu 0 312 129 797 107 25 19 chr10 39921865 39922053 -105667235 - L1P LINE L1 -740 5411 5223 561 261 0 0 chr10 39922065 39922203 -105667085 - L1 LINE L1 -1137 5009 4872 252 141 0 84 chr10 39922207 39922278 -105667010 + MER21A LTR ERV1 861 925 -6 416 191 14 164 chr10 39922285 39922505 -105666783 + L2 LINE L2 3125 3311 -2 381 315 192 3 chr10 39922479 39922822 -105666466 - L2 LINE L2 -10 3303 2896 * 826 274 173 43 chr10 39923229 39923994 -105665294 + L2 LINE L2 2426 3310 -3 330 269 8 34 chr10 39924016 39924135 -105665153 + MIR SINE MIR 146 261 -1 287 258 52 21 chr10 39924183 39924280 -105665008 + MIR3 SINE MIR 55 154 -54 220 317 98 8 chr10 39924337 39924460 -105664828 - L2 LINE L2 -712 2602 2469 748 146 7 51 chr10 39924538 39924675 -105664613 - AluJ SINE Alu -181 131 1 2199 122 0 0 chr10 39924696 39925008 -105664280 - AluSx SINE Alu 0 312 1 22 0 0 0 chr10 39926505 39926527 -105662761 + GC_rich Low_complexity Low_complexity 1 22 0 189 317 169 48 chr10 39927837 39928086 -105661202 - L2 LINE L2 -415 2899 2621 2236 111 0 3 chr10 39928464 39928771 -105660517 - AluSg SINE Alu -4 306 1 2033 86 4 0 chr10 39928771 39929039 -105660249 - AluSp SINE Alu -12 301 32 1443 181 38 0 chr10 39929139 39929405 -105659883 + AluJo SINE Alu 25 300 -12 2021 89 4 4 chr10 39930017 39930287 -105659001 + AluSx SINE Alu 41 310 -2 730 153 9 0 chr10 39930293 39930404 -105658884 - FLAM_C SINE Alu -26 117 6 242 116 23 0 chr10 39930457 39930500 -105658788 + CT-rich Low_complexity Low_complexity 3 46 0 1121 186 9 28 chr10 39930503 39930718 -105658570 - AluJo SINE Alu -2 310 100 227 188 42 0 chr10 39930742 39930790 -105658498 - L1MB7 LINE L1 -32 6152 6103 782 245 78 5 chr10 39930813 39931017 -105658271 + MER20 DNA MER1_type 1 219 0 635 251 163 0 chr10 39933217 39933444 -105655844 - MLT1E1 LTR MaLR -13 641 378 390 195 40 1 chr10 39933471 39933631 -105655657 - MLT1E1 LTR MaLR -407 217 35 25 0 0 0 chr10 39933678 39933703 -105655585 + AT_rich Low_complexity Low_complexity 1 25 0 697 164 66 0 chr10 39933703 39933825 -105655463 + AluJo SINE Alu 1 130 -182 1056 191 68 38 chr10 39934257 39934550 -105654738 + MER21B LTR ERV1 13 314 -549 2163 103 0 0 chr10 39934553 39934866 -105654422 + AluSx SINE Alu 1 313 0 822 216 7 0 chr10 39934869 39935022 -105654266 + AluJo SINE Alu 137 290 -12 1764 171 7 0 chr10 39935022 39935302 -105653986 + AluSx SINE Alu 3 284 -28 788 253 61 7 chr10 39935332 39935628 -105653660 + L1MC4a LINE L1 5262 5573 -591 2162 112 3 3 chr10 39935803 39936106 -105653182 - AluSx SINE Alu -9 303 1 665 476 0 48 chr10 39936187 39936414 -105652874 - AluJo SINE Alu -94 218 3 309 310 26 26 chr10 39936422 39936577 -105652711 + L1MC4a LINE L1 5865 6019 -1789 2382 71 0 7 chr10 39936669 39936979 -105652309 + AluY SINE Alu 1 308 -3 2113 120 13 0 chr10 39936979 39937303 -105651985 + AluSq SINE Alu 1 313 0 382 297 77 45 chr10 39937385 39937540 -105651748 - L1MC4a LINE L1 -1834 5974 5815 1484 189 62 7 chr10 39937555 39937846 -105651442 + AluJo SINE Alu 1 307 -5 1592 178 0 7 chr10 39937851 39938120 -105651168 + AluJo SINE Alu 1 267 -45 844 101 0 8 chr10 39938122 39938251 -105651037 - AluSg/x SINE Alu -1 311 184 700 171 18 29 chr10 39938356 39938526 -105650762 + L1MB7 LINE L1 5994 6161 -23 248 329 32 71 chr10 39938616 39938899 -105650389 - L2 LINE L2 -474 2840 2569 2237 61 20 10 chr10 39939131 39939424 -105649864 + AluY SINE Alu 1 296 -15 1553 195 10 7 chr10 39939427 39939725 -105649563 + AluJo SINE Alu 1 299 -13 559 218 19 21 chr10 39940403 39940558 -105648730 - MIR SINE MIR -65 143 41 207 236 139 0 chr10 39940667 39940739 -105648549 - L2 LINE L2 -29 3284 3203 498 213 47 31 chr10 39940765 39940892 -105648396 - MIR SINE MIR -122 140 12 446 253 120 0 chr10 39940951 39941109 -105648179 - L1M4c LINE L1 -4787 1597 1421 1870 122 0 7 chr10 39941623 39941894 -105647394 + AluSx SINE Alu 20 288 -24 923 146 39 63 chr10 39942765 39942970 -105646318 - AluJo SINE Alu -47 265 66 245 212 126 86 chr10 39945156 39945307 -105643981 - MIR SINE MIR -75 187 31 314 313 0 0 chr10 39946457 39946540 -105642748 + L2 LINE L2 3230 3312 -1 23 68 0 0 chr10 39947904 39947948 -105641340 + GC_rich Low_complexity Low_complexity 1 44 0 57 61 0 0 chr10 39948218 39948317 -105640971 + GC_rich Low_complexity Low_complexity 1 99 0 210 270 7 36 chr10 39948497 39948634 -105640654 + GA-rich Low_complexity Low_complexity 3 135 0 1759 159 0 34 chr10 39948789 39949110 -105640178 - AluJb SINE Alu 0 312 3 541 248 7 35 chr10 39949117 39949258 -105640030 - MIR SINE MIR -70 192 56 192 346 144 0 chr10 39949791 39949895 -105639393 + L2 LINE L2 3138 3256 -16 411 158 18 18 chr10 39949913 39950027 -105639261 + (TGGA)n Simple_repeat Simple_repeat 1 114 0 654 211 35 6 chr10 39950130 39950451 -105638837 + (TGGA)n Simple_repeat Simple_repeat 1 330 0 306 271 25 34 chr10 39950706 39950824 -105638464 + (TGGA)n Simple_repeat Simple_repeat 1 117 0 672 234 5 58 chr10 39950827 39950901 -105638387 + MER105 DNA DNA 6 82 -122 2389 81 3 0 chr10 39950901 39951208 -105638080 - AluSp SINE Alu -5 308 1 672 234 5 58 chr10 39951208 39951338 -105637950 + MER105 DNA DNA 82 199 -5 965 181 0 23 chr10 39951437 39951608 -105637680 + AluSg/x SINE Alu 133 299 -11 2316 88 0 0 chr10 39951620 39951914 -105637374 + AluSx SINE Alu 1 294 -18 268 199 39 66 chr10 39951919 39952100 -105637188 + (CGGGA)n Simple_repeat Simple_repeat 3 178 0 800 130 0 0 chr10 39952391 39952506 -105636782 - AluJo SINE Alu -41 271 157 577 142 42 67 chr10 39952510 39952630 -105636658 - AluJo SINE Alu -195 117 1 322 303 7 21 chr10 39952630 39952775 -105636513 + CT-rich Low_complexity Low_complexity 2 144 0 357 306 75 45 chr10 39953378 39953760 -105635528 - LTR16B LTR ERVL 0 464 8 243 245 0 0 chr10 39954164 39954226 -105635062 + CT-rich Low_complexity Low_complexity 1 62 0 611 108 47 7 chr10 39954898 39955335 -105633953 + MSR1 Satellite Satellite 1 454 -30 2117 98 0 74 chr10 39956182 39956519 -105632769 + AluSx SINE Alu 1 312 0 679 94 15 12 chr10 39956896 39957222 -105632066 - MSR1 Satellite Satellite 0 327 1 207 114 0 0 chr10 39957969 39958004 -105631284 + (TC)n Simple_repeat Simple_repeat 2 36 0 674 107 9 2 chr10 39958299 39958884 -105630404 - MSR1 Satellite Satellite 0 589 1 384 244 41 57 chr10 39959774 39959897 -105629391 - MIR SINE MIR -40 222 102 2110 118 0 0 chr10 39960010 39960306 -105628982 + AluSx SINE Alu 1 296 -16 2143 82 3 39 chr10 39960309 39960639 -105628649 + AluSg SINE Alu 1 310 0 295 261 32 32 chr10 39960962 39961170 -105628118 + (TCTCTG)n Simple_repeat Simple_repeat 1 208 0 268 239 22 36 chr10 39962165 39962303 -105626985 + (CGGG)n Simple_repeat Simple_repeat 1 136 0 206 247 21 21 chr10 39962449 39962542 -105626746 + C-rich Low_complexity Low_complexity 4 96 0 612 91 23 19 chr10 39962898 39963123 -105626165 + MSR1 Satellite Satellite 1 225 -1 2418 73 3 13 chr10 39964342 39964658 -105624630 + AluSp SINE Alu 1 313 0 566 151 38 19 chr10 39965149 39965255 -105624033 + AluJo/FLAM SINE Alu 5 112 -200 1866 128 0 17 chr10 39965255 39965573 -105623715 - AluSx SINE Alu 0 312 1 22 56 0 0 chr10 39965951 39965987 -105623301 + GC_rich Low_complexity Low_complexity 1 36 0 2185 94 0 33 chr10 39966737 39967044 -105622244 - AluSx SINE Alu -15 297 1 440 267 90 99 chr10 39967130 39967316 -105621972 + L1ME4a LINE L1 5692 5878 -243 779 194 0 0 chr10 39967316 39967445 -105621843 + FLAM_C SINE Alu 1 129 -4 440 267 90 99 chr10 39967445 39967670 -105621618 + L1ME4a LINE L1 5878 6099 -22 328 287 29 44 chr10 39967846 39967982 -105621306 - MIR SINE MIR -58 150 17 589 77 0 2 chr10 39968254 39968463 -105620825 + AluSp SINE Alu 1 243 -70 447 143 0 0 chr10 39968671 39968741 -105620547 - AluS SINE Alu -21 290 221 194 0 39 0 chr10 39968772 39968798 -105620490 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 636 86 30 6 chr10 39970024 39970667 -105618621 - MSR1 Satellite Satellite 0 658 1 695 78 13 0 chr10 39971498 39972148 -105617140 - MSR1 Satellite Satellite 0 658 1 2376 91 7 0 chr10 39974095 39974404 -105614884 - AluSx SINE Alu -1 311 1 328 161 0 0 chr10 39974417 39974473 -105614815 - L2 LINE L2 -17 3296 3241 451 169 11 0 chr10 39974492 39974581 -105614707 + MER20 DNA MER1_type 80 169 -50 696 262 159 12 chr10 39974586 39974956 -105614332 - L2 LINE L2 -254 3059 2637 681 199 50 103 chr10 39974956 39975104 -105614184 + L1MB5 LINE L1 5889 6019 -155 2151 86 7 30 chr10 39975104 39975408 -105613880 - AluSx SINE Alu -15 297 1 681 199 50 103 chr10 39975408 39975520 -105613768 + L1MB5 LINE L1 6019 6135 -39 251 75 0 4 chr10 39975580 39975753 -105613535 + AluSg1 SINE Alu 11 248 -52 1030 196 21 0 chr10 39975753 39975947 -105613341 + AluJo SINE Alu 85 282 -30 782 133 42 0 chr10 39975947 39976067 -105613221 - FLAM_C SINE Alu -4 139 15 542 161 11 11 chr10 39976065 39976158 -105613130 - FRAM SINE Alu -43 133 41 * 1863 161 3 3 chr10 39976173 39976472 -105612816 - AluJb SINE Alu -13 299 1 283 240 70 30 chr10 39976623 39976723 -105612565 - L2 LINE L2 0 3313 3210 186 171 0 0 chr10 39976952 39976993 -105612295 + G-rich Low_complexity Low_complexity 1 41 0 225 311 0 16 chr10 39977708 39977830 -105611458 + (CCGGG)n Simple_repeat Simple_repeat 4 123 0 * 381 280 6 23 chr10 39977754 39977929 -105611359 + (CGGGG)n Simple_repeat Simple_repeat 1 172 0 216 298 0 0 chr10 39979504 39979561 -105609727 + MIR SINE MIR 76 132 -76 269 286 10 20 chr10 39980390 39980488 -105608800 + CT-rich Low_complexity Low_complexity 3 99 0 615 254 22 54 chr10 39980670 39980855 -105608433 + MIR SINE MIR 49 227 -35 699 215 70 15 chr10 39981636 39981836 -105607452 + MER20 DNA MER1_type 9 219 0 2347 94 3 0 chr10 39981862 39982170 -105607118 - AluSp SINE Alu -4 309 1 1903 147 19 3 chr10 39982433 39982740 -105606548 + AluJb SINE Alu 1 312 0 2336 48 42 0 chr10 39987636 39987925 -105601363 - AluY SINE Alu -10 301 1 628 253 26 0 chr10 39989336 39989490 -105599798 + MIR3 SINE MIR 48 205 -3 239 297 0 16 chr10 39990219 39990283 -105599005 + MIR SINE MIR 128 190 -72 234 240 13 13 chr10 39991962 39992037 -105597251 + (CGGGG)n Simple_repeat Simple_repeat 1 75 0 21 0 0 0 chr10 39992102 39992123 -105597165 + GC_rich Low_complexity Low_complexity 1 21 0 186 43 0 0 chr10 39993097 39993120 -105596168 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 564 266 101 0 chr10 39993125 39993343 -105595945 - Tigger3(Golem) DNA MER2_type 0 3029 2790 297 0 0 0 chr10 39993453 39993486 -105595802 + (TG)n Simple_repeat Simple_repeat 1 33 0 * 501 32 0 0 chr10 39993485 39993548 -105595740 + (GA)n Simple_repeat Simple_repeat 1 63 0 1022 116 0 0 chr10 39993550 39993688 -105595600 - AluSg/x SINE Alu -41 269 132 2039 103 3 33 chr10 39993688 39993988 -105595300 - AluSq SINE Alu -22 291 1 1259 129 5 0 chr10 39993997 39994183 -105595105 - AluJo SINE Alu -26 286 100 2091 113 31 0 chr10 39994207 39994498 -105594790 - AluSx SINE Alu -12 300 1 273 282 14 0 chr10 39994575 39994646 -105594642 + MIR SINE MIR 80 151 -111 353 371 47 33 chr10 39995100 39995313 -105593975 + L1ME3A LINE L1 5639 5854 -316 2184 110 0 7 chr10 39995370 39995679 -105593609 + AluSq SINE Alu 1 307 -6 405 78 13 39 chr10 39995914 39995991 -105593297 + (TTTC)n Simple_repeat Simple_repeat 2 76 0 2138 74 7 7 chr10 39996104 39996387 -105592901 - AluY SINE Alu -28 283 1 2233 88 0 31 chr10 39996464 39996784 -105592504 - AluY SINE Alu -1 310 1 2213 98 0 7 chr10 39996793 39997120 -105592168 - AluSg1 SINE Alu 0 309 1 405 132 0 29 chr10 39997246 39997337 -105591951 + AluSp/q SINE Alu 224 313 0 864 138 38 12 chr10 39997337 39997497 -105591791 - THE1C LTR MaLR -211 164 1 2154 105 10 3 chr10 39997526 39997832 -105591456 + AluSx SINE Alu 1 308 -4 381 276 2 0 chr10 39997943 39998049 -105591239 - MIR SINE MIR -63 145 71 1220 203 108 0 chr10 39998154 39998450 -105590838 + L1MB5 LINE L1 5811 6138 -36 2094 124 0 16 chr10 39998455 39998769 -105590519 + AluSx SINE Alu 1 309 -3 297 179 0 90 chr10 39998791 39998869 -105590419 - AluJ/FRAM SINE Alu -16 286 216 1642 178 21 0 chr10 39998941 39999222 -105590066 - AluJo SINE Alu -25 287 1 180 296 0 19 chr10 39999295 39999349 -105589939 + MER5A DNA MER1_type 38 90 -99 1831 166 14 0 chr10 39999375 39999670 -105589618 - AluJo SINE Alu -13 299 1 222 253 13 13 chr10 39999671 39999772 -105589516 + (TA)n Simple_repeat Simple_repeat 1 101 0 1250 251 41 88 chr10 39999814 39999863 -105589425 + MLT1F LTR MaLR 1 51 -491 2194 97 7 7 chr10 39999863 40000163 -105589125 - AluSg SINE Alu -10 300 1 1250 251 41 88 chr10 40000163 40000345 -105588943 + MLT1F LTR MaLR 51 240 -302 2093 88 10 36 chr10 40000345 40000651 -105588637 + AluSq SINE Alu 1 298 -15 261 0 0 0 chr10 40000651 40000680 -105588608 + (TA)n Simple_repeat Simple_repeat 2 30 0 558 0 0 0 chr10 40000679 40000741 -105588547 + (GA)n Simple_repeat Simple_repeat 2 63 0 1250 251 41 88 chr10 40000680 40001021 -105588267 + MLT1F LTR MaLR 238 490 -52 2308 76 0 0 chr10 40001074 40001365 -105587923 + AluSg SINE Alu 1 291 -19 203 341 22 0 chr10 40001366 40001457 -105587831 + L2 LINE L2 2776 2868 -446 936 104 7 32 chr10 40001568 40001722 -105587566 - AluSx SINE Alu -146 166 17 662 212 0 0 chr10 40001731 40001849 -105587439 + FAM SINE Alu 49 166 -19 603 220 71 54 chr10 40001862 40002030 -105587258 + L1M4 LINE L1 5474 5644 -530 1264 69 0 0 chr10 40002033 40002193 -105587095 + AluSq SINE Alu 145 304 -9 225 388 0 0 chr10 40002204 40002338 -105586950 + (TGGA)n Simple_repeat Simple_repeat 4 137 0 192 298 155 0 chr10 40002351 40002435 -105586853 + MIR SINE MIR 4 100 -162 26 0 0 0 chr10 40002656 40002682 -105586606 + AT_rich Low_complexity Low_complexity 1 26 0 1997 71 0 46 chr10 40002688 40002971 -105586317 + AluY SINE Alu 1 270 -41 349 92 0 0 chr10 40003071 40003137 -105586151 - Alu SINE Alu -250 51 1 779 198 44 6 chr10 40003137 40003319 -105585969 - L1MB5 LINE L1 -47 6127 5939 1105 53 0 0 chr10 40003507 40003638 -105585650 - AluSg SINE Alu -179 131 1 2387 99 0 0 chr10 40003689 40004002 -105585286 - AluSq SINE Alu 0 313 1 325 309 55 0 chr10 40004005 40004115 -105585173 - MIR SINE MIR -37 225 110 2191 93 10 3 chr10 40004253 40004564 -105584724 + AluSp SINE Alu 1 313 0 204 0 83 0 chr10 40005326 40005362 -105583926 + T-rich Low_complexity Low_complexity 2 40 0 2339 61 0 0 chr10 40005364 40005644 -105583644 - AluSg SINE Alu -30 280 1 1045 82 0 27 chr10 40005645 40005791 -105583497 - AluSq/x SINE Alu -170 142 1 26 0 0 0 chr10 40005802 40005828 -105583460 + AT_rich Low_complexity Low_complexity 1 26 0 2136 125 0 3 chr10 40005959 40006264 -105583024 + AluSx SINE Alu 1 304 -8 2310 96 0 0 chr10 40006264 40006565 -105582723 + AluSx SINE Alu 1 301 -11 317 189 57 104 chr10 40006565 40006615 -105582673 + L1MB5 LINE L1 6073 6117 -57 2155 126 0 0 chr10 40006615 40006917 -105582371 - AluSq SINE Alu -11 302 1 317 189 57 104 chr10 40006917 40006972 -105582316 + L1MB5 LINE L1 6117 6173 -1 299 197 47 55 chr10 40006987 40007109 -105582179 - MSR1 Satellite Satellite -1 120 1 437 152 22 0 chr10 40007839 40007931 -105581357 - MSR1 Satellite Satellite 0 111 18 268 260 0 40 chr10 40008321 40008421 -105580867 - MSR1 Satellite Satellite -14 97 2 728 49 3 12 chr10 40009123 40009378 -105579910 - MSR1 Satellite Satellite 0 252 1 240 241 96 12 chr10 40009734 40009817 -105579471 + MSR1 Satellite Satellite 14 103 -8 2143 96 6 16 chr10 40010319 40010633 -105578655 + AluSq SINE Alu 3 313 0 2187 116 0 3 chr10 40010654 40010965 -105578323 + AluSq SINE Alu 1 310 -3 1787 122 45 25 chr10 40010972 40011258 -105578030 + AluJo SINE Alu 1 292 -20 1800 121 0 16 chr10 40011428 40011685 -105577603 - AluSx SINE Alu -27 285 33 2039 127 0 3 chr10 40011694 40011986 -105577302 - AluSx SINE Alu -19 293 3 297 192 0 55 chr10 40012086 40012159 -105577129 - AluS SINE Alu -234 69 1 309 234 47 85 chr10 40012159 40012256 -105577032 - MER106A DNA MER1_type -8 228 129 1690 180 3 19 chr10 40012256 40012437 -105576851 - AluJb SINE Alu 0 312 137 2355 89 0 3 chr10 40012437 40012740 -105576548 - AluSq SINE Alu -10 303 2 1690 180 3 19 chr10 40012740 40012875 -105576413 - AluJb SINE Alu -175 137 1 309 234 47 85 chr10 40012875 40013012 -105576276 - MER106A DNA MER1_type -107 129 3 495 232 18 9 chr10 40013014 40013126 -105576162 - L2 LINE L2 -4 3309 3197 657 333 37 8 chr10 40013577 40013820 -105575468 + MIR SINE MIR 5 254 -8 742 229 131 6 chr10 40013954 40014137 -105575151 - MER63A DNA MER1_type -2 208 3 236 282 42 14 chr10 40014195 40014266 -105575022 + MIR SINE MIR 71 143 -65 2244 96 0 3 chr10 40014287 40014459 -105574829 - AluSg SINE Alu -8 302 130 2361 87 0 0 chr10 40014459 40014759 -105574529 - AluY SINE Alu -11 300 1 2244 96 0 3 chr10 40014759 40014889 -105574399 - AluSg SINE Alu -180 130 1 2161 108 0 0 chr10 40014889 40015205 -105574083 - AluSx SINE Alu 0 316 1 2037 140 0 0 chr10 40015917 40016209 -105573079 + AluSx SINE Alu 1 292 -20 754 109 0 0 chr10 40016212 40016313 -105572975 - AluJo/FLAM SINE Alu -203 109 9 261 0 0 0 chr10 40017676 40017705 -105571583 + (T)n Simple_repeat Simple_repeat 1 29 0 208 135 0 0 chr10 40017929 40017966 -105571322 + (TAAA)n Simple_repeat Simple_repeat 4 40 0 2366 83 0 3 chr10 40018950 40019252 -105570036 + AluSx SINE Alu 1 301 -11 824 194 38 21 chr10 40019476 40019662 -105569626 - MER20 DNA MER1_type -1 218 30 1059 222 169 14 chr10 40019668 40020100 -105569188 + MLT1D LTR MaLR 6 504 -1 1906 164 18 0 chr10 40020477 40020818 -105568470 + MLT1A1 LTR MaLR 19 365 0 310 171 239 11 chr10 40021014 40021102 -105568186 - MER81 DNA DNA -3 111 4 355 179 16 41 chr10 40021360 40021483 -105567805 + C-rich Low_complexity Low_complexity 5 124 0 2113 127 0 13 chr10 40021886 40022200 -105567088 + AluSx SINE Alu 1 310 -2 1801 143 3 73 chr10 40022233 40022422 -105566866 - AluJb SINE Alu -6 306 148 369 0 0 0 chr10 40022422 40022463 -105566825 + (TG)n Simple_repeat Simple_repeat 2 42 0 1801 143 3 73 chr10 40022463 40022602 -105566686 - AluJb SINE Alu -164 148 1 2183 80 31 0 chr10 40022644 40022933 -105566355 - AluSg SINE Alu -12 298 1 401 250 108 0 chr10 40023173 40023293 -105565995 + MER117 DNA MER1_type 18 150 -47 502 293 43 0 chr10 40023375 40023539 -105565749 + MIR SINE MIR 31 201 -61 186 359 54 0 chr10 40025811 40025903 -105563385 + L2 LINE L2 3209 3305 -8 435 252 38 50 chr10 40026187 40026346 -105562942 - MIR3 SINE MIR -15 193 37 260 293 24 85 chr10 40026595 40026759 -105562529 - MIR3 SINE MIR -53 155 2 632 146 6 55 chr10 40027606 40027915 -105561373 + MSR1 Satellite Satellite 1 293 -2 485 287 7 7 chr10 40028727 40028870 -105560418 - MIR SINE MIR -65 197 55 235 244 326 0 chr10 40028976 40029062 -105560226 - L2 LINE L2 0 3272 3159 611 191 143 19 chr10 40029133 40029343 -105559945 + MLT1C LTR MaLR 126 361 -106 2166 128 0 6 chr10 40029343 40029656 -105559632 - AluSq SINE Alu -2 311 1 1097 81 0 0 chr10 40029656 40029792 -105559496 - AluSq/x SINE Alu -177 136 1 331 279 240 22 chr10 40029794 40029973 -105559315 + MIR SINE MIR 44 261 -1 225 229 71 29 chr10 40030445 40030515 -105558773 + MIR SINE MIR 117 189 -73 2129 125 0 0 chr10 40030527 40030839 -105558449 + AluSx SINE Alu 1 312 0 648 233 39 11 chr10 40030864 40031044 -105558244 + MER82 DNA MER2_type 1 185 -468 845 109 39 0 chr10 40031046 40031174 -105558114 - AluSg1 SINE Alu -15 297 165 699 70 0 0 chr10 40031174 40031260 -105558028 - AluSg1 SINE Alu -223 86 1 1813 216 48 18 chr10 40031260 40031714 -105557574 + MER82 DNA MER2_type 179 646 -7 1488 113 196 23 chr10 40031740 40032006 -105557282 + AluSx SINE Alu 1 312 0 412 273 117 73 chr10 40032042 40032095 -105557193 - MIR SINE MIR -37 225 176 2238 99 6 6 chr10 40032095 40032408 -105556880 + AluSq SINE Alu 1 313 0 412 273 117 73 chr10 40032408 40032559 -105556729 - MIR SINE MIR -86 176 12 314 284 11 0 chr10 40032691 40032779 -105556509 + MIR SINE MIR 33 121 -87 1949 120 27 0 chr10 40032842 40033141 -105556147 + AluSg SINE Alu 1 307 -3 1764 148 0 57 chr10 40033173 40033342 -105555946 - AluJo SINE Alu -10 302 158 2498 40 0 7 chr10 40033342 40033643 -105555645 - AluY SINE Alu -11 300 2 1764 148 0 57 chr10 40033643 40033791 -105555497 - AluJo SINE Alu -154 158 3 238 268 120 63 chr10 40034066 40034208 -105555080 - L2 LINE L2 -252 3061 2912 2080 112 0 3 chr10 40034237 40034524 -105554764 - AluSx SINE Alu -26 286 1 2006 141 0 3 chr10 40034786 40035098 -105554190 + AluJb SINE Alu 1 311 -1 2086 128 0 0 chr10 40035109 40035406 -105553882 + AluSx SINE Alu 2 298 -14 2102 124 0 0 chr10 40035408 40035707 -105553581 + AluSx SINE Alu 1 299 -13 25 0 0 0 chr10 40036341 40036366 -105552922 + AT_rich Low_complexity Low_complexity 1 25 0 2188 108 3 0 chr10 40036382 40036679 -105552609 - AluSg SINE Alu -12 298 1 261 0 0 0 chr10 40036679 40036708 -105552580 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 1126 129 6 28 chr10 40036708 40036857 -105552431 - AluSg/x SINE Alu -30 282 136 1847 91 109 4 chr10 40036857 40037132 -105552156 - AluSx SINE Alu -8 304 1 1126 129 6 28 chr10 40037132 40037160 -105552128 - AluSg/x SINE Alu -176 136 109 276 29 0 0 chr10 40037161 40037196 -105552092 + U2 snRNA snRNA 1 35 -153 810 227 0 0 chr10 40037199 40037349 -105551939 - AluJb SINE Alu -27 285 136 2338 90 0 0 chr10 40037357 40037657 -105551631 - AluSx SINE Alu -12 300 1 593 258 14 24 chr10 40037662 40037871 -105551417 - L1MC5 LINE L1 -35 7926 7720 2209 103 7 3 chr10 40038149 40038459 -105550829 + AluSx SINE Alu 1 311 -1 1523 132 107 22 chr10 40038682 40038954 -105550334 - AluJb SINE Alu -17 295 1 355 126 20 25 chr10 40038983 40039083 -105550205 + FLAM SINE Alu 64 121 -12 249 247 82 0 chr10 40039422 40039507 -105549781 - MER20 DNA MER1_type -4 215 124 700 186 7 57 chr10 40039628 40039768 -105549520 - FLAM_C SINE Alu 0 133 1 309 314 76 0 chr10 40039771 40039905 -105549383 - MIR SINE MIR -62 146 51 1266 218 38 145 chr10 40040199 40040271 -105549017 - L1MB7 LINE L1 -9 6175 6097 1719 169 30 3 chr10 40040271 40040573 -105548715 + AluJb SINE Alu 1 310 -2 1266 218 38 145 chr10 40040573 40040691 -105548597 - L1MB7 LINE L1 -87 6097 5968 2398 81 10 0 chr10 40040691 40041001 -105548287 - AluSq SINE Alu 0 313 1 1266 218 38 145 chr10 40041001 40041466 -105547822 - L1MB7 LINE L1 -216 5968 5589 2086 103 16 22 chr10 40041471 40041782 -105547506 - AluSx SINE Alu -3 309 1 2004 133 24 0 chr10 40043301 40043595 -105545693 + AluSx SINE Alu 1 301 -11 2333 92 3 0 chr10 40043682 40043987 -105545301 - AluSp SINE Alu -7 306 1 1146 158 91 24 chr10 40044838 40044886 -105544402 - L1MB7 LINE L1 -19 6165 6118 387 258 89 48 chr10 40044886 40045091 -105544197 - L1MB1 LINE L1 -163 6026 5887 2044 106 3 3 chr10 40045091 40045399 -105543889 - AluSq SINE Alu 0 308 1 387 258 89 48 chr10 40045399 40045453 -105543835 - L1MB1 LINE L1 -302 5887 5837 1026 200 39 45 chr10 40045574 40045740 -105543548 - L1MB1 LINE L1 -864 5282 5117 2627 36 0 0 chr10 40045740 40046044 -105543244 - AluY SINE Alu -7 304 1 1026 200 39 45 chr10 40046044 40046207 -105543081 - L1MB1 LINE L1 -1029 5117 4955 192 97 0 0 chr10 40046990 40047021 -105542267 + (CCCCCA)n Simple_repeat Simple_repeat 4 34 0 646 107 9 5 chr10 40047169 40047832 -105541456 - MSR1 Satellite Satellite 0 665 1 678 109 18 3 chr10 40048478 40048875 -105540413 - MSR1 Satellite Satellite 0 402 1 303 179 17 86 chr10 40050450 40050567 -105538721 + GA-rich Low_complexity Low_complexity 2 110 0 221 247 45 56 chr10 40050539 40050717 -105538571 + (CAGAGA)n Simple_repeat Simple_repeat 3 178 0 * 274 264 6 66 chr10 40050665 40050832 -105538456 + GA-rich Low_complexity Low_complexity 6 162 0 1502 147 128 11 chr10 40051386 40051659 -105537629 + AluJo SINE Alu 1 305 -7 546 311 24 48 chr10 40051715 40051966 -105537322 - L2 LINE L2 -5 3308 3064 428 82 33 0 chr10 40051966 40052027 -105537261 - AluYb8 SINE Alu -174 144 82 2420 90 0 0 chr10 40052043 40052353 -105536935 - AluSg SINE Alu 0 310 1 238 215 92 0 chr10 40052360 40052425 -105536863 - MER94 DNA DNA -61 73 3 1800 164 3 7 chr10 40052425 40052735 -105536553 - AluJo SINE Alu -3 309 1 1993 184 106 2 chr10 40052761 40053196 -105536092 + MLT1D LTR MaLR 26 505 0 375 23 0 0 chr10 40053247 40053291 -105535997 + (CA)n Simple_repeat Simple_repeat 1 44 0 229 276 92 10 chr10 40053710 40053808 -105535480 - MIR SINE MIR -62 146 41 580 249 146 5 chr10 40055228 40055413 -105533875 + MIR SINE MIR 31 241 -21 787 222 17 78 chr10 40055439 40055469 -105533819 + MIR SINE MIR 20 50 -212 1769 152 10 29 chr10 40055469 40055779 -105533509 - AluSx SINE Alu -8 304 1 787 222 17 78 chr10 40055779 40055978 -105533310 + MIR SINE MIR 50 235 -27 2005 117 7 3 chr10 40056156 40056446 -105532842 - AluSx SINE Alu -21 291 1 827 185 65 10 chr10 40057045 40057245 -105532043 - L2 LINE L2 -247 3066 2856 252 317 0 0 chr10 40057762 40057822 -105531466 - L2 LINE L2 -1 3312 3253 21 0 0 0 chr10 40057923 40057944 -105531344 + AT_rich Low_complexity Low_complexity 1 21 0 1545 221 128 7 chr10 40058040 40058276 -105531012 - L1MB5 LINE L1 -76 6098 5892 1562 158 37 71 chr10 40058276 40058443 -105530845 - AluSx SINE Alu 0 312 160 2225 113 0 0 chr10 40058443 40058743 -105530545 - AluSg SINE Alu -10 300 1 1562 158 37 71 chr10 40058743 40058898 -105530390 - AluSx SINE Alu -152 160 1 1545 221 128 7 chr10 40058898 40059123 -105530165 - L1MB5 LINE L1 -282 5892 5581 246 130 0 22 chr10 40059128 40059174 -105530114 - MER58A DNA MER1_type -33 74 30 2237 158 21 13 chr10 40059368 40059755 -105529533 - MLT1B LTR MaLR 0 390 1 25 0 0 0 chr10 40160595 40160620 -105428668 + AT_rich Low_complexity Low_complexity 1 25 0 436 307 132 11 chr10 40160909 40161126 -105428162 + MIR SINE MIR 3 243 -19 317 361 13 13 chr10 40161713 40161868 -105427420 - MIR SINE MIR -10 252 98 183 286 41 88 chr10 40162546 40162693 -105426595 + L2 LINE L2 3101 3240 -73 182 371 11 0 chr10 40162873 40162962 -105426326 + MIR SINE MIR 53 142 -120 2361 95 10 0 chr10 40164002 40164306 -105424982 + AluSq SINE Alu 1 307 -6 26 30 0 0 chr10 40164326 40164359 -105424929 + AT_rich Low_complexity Low_complexity 1 33 0 2251 93 0 0 chr10 40164441 40164731 -105424557 - AluSg1 SINE Alu -19 290 1 351 222 0 0 chr10 40164766 40164838 -105424450 + L2 LINE L2 3201 3272 0 444 324 14 0 chr10 40165598 40165740 -105423548 - MIR SINE MIR -10 252 109 182 289 105 13 chr10 40165934 40166010 -105423278 + L2 LINE L2 3182 3264 -49 184 258 124 41 chr10 40166291 40166388 -105422900 + MIR SINE MIR 98 202 -60 781 207 75 46 chr10 40166515 40166689 -105422599 + MER20 DNA MER1_type 16 194 -25 551 165 0 0 chr10 40167255 40167346 -105421942 - MSTC LTR MaLR -337 91 1 309 262 123 57 chr10 40167875 40168033 -105421255 + MIR SINE MIR 21 200 -62 216 220 44 0 chr10 40168034 40168125 -105421163 + (CATATA)n Simple_repeat Simple_repeat 2 96 0 415 294 77 33 chr10 40168956 40169189 -105420099 - MIR SINE MIR 0 262 25 2487 84 0 0 chr10 40169346 40169657 -105419631 + AluY SINE Alu 1 311 0 2021 106 29 0 chr10 40169722 40169995 -105419293 - AluSc SINE Alu -28 281 1 213 322 104 17 chr10 40170053 40170168 -105419120 + L3 LINE CR1 1167 1291 -286 211 257 189 0 chr10 40170242 40170316 -105418972 - MIR SINE MIR -68 140 52 356 393 12 0 chr10 40170348 40170511 -105418777 + L3 LINE CR1 1390 1554 -23 6894 59 27 8 chr10 40171048 40171928 -105417360 - MER11D LTR ERVK 0 897 1 23 0 0 0 chr10 40171949 40171972 -105417316 + AT_rich Low_complexity Low_complexity 1 23 0 250 318 19 19 chr10 40171975 40172129 -105417159 - L1ME2 LINE L1 -238 5926 5773 206 183 21 21 chr10 40172368 40172461 -105416827 + (TA)n Simple_repeat Simple_repeat 1 93 0 2016 113 33 3 chr10 40172604 40172904 -105416384 - AluSc SINE Alu 0 309 1 241 227 0 0 chr10 40173759 40173803 -105415485 + polypyrimidine Low_complexity Low_complexity 3 46 0 950 296 94 27 chr10 40174006 40174408 -105414880 + LTR16A LTR ERVL 16 444 -6 492 298 77 34 chr10 40175348 40175583 -105413705 + MIR SINE MIR 8 252 -10 2465 40 0 17 chr10 40175772 40176073 -105413215 + AluY SINE Alu 1 296 -15 321 345 7 22 chr10 40176126 40176265 -105413023 + MIR3 SINE MIR 3 139 -69 216 326 81 91 chr10 40176320 40176541 -105412747 - L2 LINE L2 -16 3256 3038 2007 123 10 3 chr10 40177135 40177427 -105411861 + AluSg SINE Alu 1 294 -16 698 339 5 5 chr10 40177458 40177679 -105411609 - MIR SINE MIR -19 243 23 245 386 85 11 chr10 40177684 40177873 -105411415 + L3 LINE CR1 1374 1576 -1 200 385 31 19 chr10 40178118 40178279 -105411009 + MIR SINE MIR 1 163 -99 1637 174 38 40 chr10 40179037 40179410 -105409878 - MLT1A2 LTR MaLR -2 372 1 324 352 64 30 chr10 40179759 40179992 -105409296 + MIR SINE MIR 7 247 -15 2106 116 0 11 chr10 40180059 40180343 -105408945 - AluSq SINE Alu -32 281 1 435 335 55 62 chr10 40180429 40180829 -105408459 - MLT1J LTR MaLR -5 506 110 355 314 14 43 chr10 40180943 40181083 -105408205 - L2 LINE L2 0 3272 3137 958 236 69 5 chr10 40181544 40181747 -105407541 - MER58A DNA MER1_type -8 216 1 194 333 103 0 chr10 40182954 40183041 -105406247 - MIR SINE MIR -73 135 40 34 42 0 0 chr10 40183178 40183226 -105406062 + AT_rich Low_complexity Low_complexity 1 48 0 228 331 169 0 chr10 40183283 40183437 -105405851 - MIR SINE MIR -72 190 11 336 359 36 48 chr10 40184156 40184404 -105404884 + MIR SINE MIR 18 262 0 226 301 41 57 chr10 40184437 40184560 -105404728 + L1ME4a LINE L1 5534 5654 -2154 407 349 20 48 chr10 40184835 40185084 -105404204 + L2 LINE L2 3027 3268 -4 385 184 35 57 chr10 40185369 40185510 -105403778 + L1ME4a LINE L1 5962 6099 -22 190 294 29 15 chr10 40186033 40186101 -105403187 + MIR SINE MIR 81 149 -113 202 391 0 0 chr10 40186290 40186354 -105402934 + L2 LINE L2 3201 3264 -8 293 322 52 35 chr10 40186757 40186872 -105402416 + L2 LINE L2 3149 3265 -7 624 183 14 81 chr10 40187183 40187402 -105401886 - MER106A DNA MER1_type -37 199 1 410 305 146 18 chr10 40187473 40187699 -105401589 + MIR SINE MIR 1 255 -7 198 197 280 0 chr10 40187913 40188012 -105401276 + MIR SINE MIR 64 197 -65 312 303 139 0 chr10 40188432 40188554 -105400734 + MIR SINE MIR 83 221 -41 222 37 0 0 chr10 40188641 40188668 -105400620 + (GA)n Simple_repeat Simple_repeat 1 27 0 267 337 0 0 chr10 40189070 40189168 -105400120 + (TGGA)n Simple_repeat Simple_repeat 1 98 0 271 293 163 0 chr10 40189362 40189485 -105399803 - MIR3 SINE MIR -27 181 39 229 345 12 0 chr10 40190712 40190796 -105398492 - MIR SINE MIR -21 241 157 438 286 138 48 chr10 40190937 40191206 -105398082 - MER102b DNA MER1_type -1 340 48 24 32 0 0 chr10 40191643 40191674 -105397614 + AT_rich Low_complexity Low_complexity 1 31 0 6359 44 5 0 chr10 40192289 40193210 -105396078 - L1PA4 LINE L1 -623 5531 4606 5305 37 2 6 chr10 40193210 40193837 -105395451 + L1PA4 LINE L1 5509 6150 -5 369 0 0 0 chr10 40193893 40193934 -105395354 + (T)n Simple_repeat Simple_repeat 1 41 0 1280 177 36 0 chr10 40194760 40195009 -105394279 - L1 LINE L1 -788 5358 5101 2689 197 21 55 chr10 40195016 40195169 -105394119 + L1MA7 LINE L1 5638 5795 -496 2185 125 0 6 chr10 40195169 40195480 -105393808 + AluSg SINE Alu 1 309 -1 2689 197 21 55 chr10 40195480 40196001 -105393287 + L1MA7 LINE L1 5795 6289 -2 705 246 170 18 chr10 40196023 40196247 -105393041 - MIR SINE MIR 0 262 5 274 272 102 85 chr10 40196855 40197071 -105392217 - MIR SINE MIR 0 262 55 240 265 26 43 chr10 40197500 40197617 -105391671 - MIR SINE MIR -44 218 104 270 330 104 17 chr10 40197851 40197965 -105391323 + MIR3 SINE MIR 37 160 -48 225 139 0 0 chr10 40197965 40198001 -105391287 + MER5B DNA MER1_type 3 38 -140 2099 175 29 3 chr10 40198054 40198436 -105390852 + L1PA15 LINE L1 5773 6164 -1 333 330 73 6 chr10 40198474 40198653 -105390635 + L1MC5 LINE L1 7711 7901 -60 314 311 13 93 chr10 40198684 40198835 -105390453 - MER5B DNA MER1_type -30 148 10 1669 167 51 0 chr10 40199362 40199655 -105389633 - AluSx SINE Alu -4 308 1 339 313 44 38 chr10 40199672 40199832 -105389456 - MIR SINE MIR -85 177 17 306 277 18 18 chr10 40199864 40199976 -105389312 + CT-rich Low_complexity Low_complexity 4 115 0 277 233 33 0 chr10 40200791 40200851 -105388437 - L1ME3A LINE L1 -58 6112 6051 1933 107 3 76 chr10 40200853 40201170 -105388118 - AluSg1 SINE Alu -15 294 1 33 25 0 0 chr10 40201375 40201415 -105387873 + AT_rich Low_complexity Low_complexity 1 40 0 3064 38 3 0 chr10 40201415 40201788 -105387500 - L1PA5 LINE L1 -11 6143 5770 37070 45 1 1 chr10 40201830 40207986 -105381302 - L1PA3 LINE L1 -3 6152 1 * 38139 72 6 1 chr10 40207985 40213729 -105375559 - L1PA5 LINE L1 -377 5778 1 238 392 10 0 chr10 40213766 40213863 -105375425 + L2 LINE L2 3157 3254 -18 350 393 64 45 chr10 40213902 40214276 -105375012 - L2 LINE L2 0 3272 2892 269 326 77 44 chr10 40214347 40214528 -105374760 - L2 LINE L2 -492 2822 2636 259 320 127 39 chr10 40215130 40215311 -105373977 + MIR SINE MIR 46 242 -20 365 270 109 7 chr10 40215321 40215458 -105373830 - MIR SINE MIR -63 199 49 241 230 0 23 chr10 40215654 40215741 -105373547 + GA-rich Low_complexity Low_complexity 3 87 0 209 179 0 0 chr10 40215987 40216026 -105373262 + (CA)n Simple_repeat Simple_repeat 2 40 0 430 321 106 13 chr10 40216751 40216988 -105372300 + MIR SINE MIR 3 261 -1 356 263 40 0 chr10 40217431 40217530 -105371758 - MIR SINE MIR -70 192 90 1146 186 14 23 chr10 40217532 40217752 -105371536 + AluJo SINE Alu 5 222 -90 659 156 17 28 chr10 40217766 40217945 -105371343 + GA-rich Low_complexity Low_complexity 4 180 0 192 77 0 0 chr10 40217955 40217981 -105371307 + (GGGA)n Simple_repeat Simple_repeat 3 28 0 32 26 0 0 chr10 40218541 40218580 -105370708 + AT_rich Low_complexity Low_complexity 1 39 0 22 0 0 0 chr10 40218716 40218738 -105370550 + AT_rich Low_complexity Low_complexity 1 22 0 222 209 0 0 chr10 40218842 40218885 -105370403 + (TATG)n Simple_repeat Simple_repeat 2 44 0 422 355 16 67 chr10 40218888 40219159 -105370129 + MIR SINE MIR 5 261 -1 193 317 42 33 chr10 40220098 40220218 -105369070 + L2 LINE L2 2176 2296 -1018 322 310 35 9 chr10 40220225 40220341 -105368947 + MIR SINE MIR 114 232 -30 296 217 0 0 chr10 40220697 40220760 -105368528 + MIR SINE MIR 58 119 -98 2391 97 3 0 chr10 40221125 40221433 -105367855 + AluSc SINE Alu 1 309 0 391 316 153 58 chr10 40222156 40222482 -105366806 - L2 LINE L2 0 3272 2916 526 289 117 8 chr10 40224218 40224457 -105364831 + MER46C DNA MER2_type 8 272 -66 219 333 0 33 chr10 40224672 40224762 -105364526 - L2 LINE L2 -3 3310 3224 273 336 26 9 chr10 40224867 40224983 -105364305 - MIR SINE MIR -144 118 1 265 314 38 9 chr10 40225157 40225262 -105364026 + MIR SINE MIR 7 114 -148 1969 109 0 8 chr10 40225276 40225532 -105363756 - AluSg SINE Alu -14 296 43 187 355 73 0 chr10 40226357 40226467 -105362821 + L2 LINE L2 2612 2729 -585 2292 103 0 0 chr10 40226505 40226796 -105362492 + AluSg SINE Alu 1 291 -19 1105 268 14 83 chr10 40227094 40227530 -105361758 - MLT1H LTR MaLR -133 416 11 198 300 62 0 chr10 40227812 40227892 -105361396 - MIR SINE MIR -97 165 81 7744 16 3 0 chr10 40229194 40230604 -105358684 + L1PA2 LINE L1 4740 6152 -3 540 332 27 18 chr10 40231213 40231436 -105357852 + MIR SINE MIR 37 261 -1 2269 44 40 0 chr10 40231527 40231979 -105357309 - AluY SINE Alu 0 463 1 201 300 86 0 chr10 40232536 40232606 -105356682 + L2 LINE L2 3213 3288 -25 1921 94 12 8 chr10 40233395 40233649 -105355639 + AluSg SINE Alu 1 255 -55 405 164 0 0 chr10 40233649 40233722 -105355566 + (TA)n Simple_repeat Simple_repeat 1 73 0 4344 186 21 19 chr10 40233982 40235411 -105353877 - L1PB4 LINE L1 -2 6154 4729 482 201 0 15 chr10 40235403 40235537 -105353751 - L1PB4 LINE L1 -2660 3486 3355 * 570 321 39 25 chr10 40235630 40236038 -105353250 - L1ME3A LINE L1 -274 5896 5483 201 317 146 0 chr10 40237039 40237121 -105352167 + MIR SINE MIR 163 256 -6 236 340 50 0 chr10 40237288 40237388 -105351900 - MIR SINE MIR -40 222 118 432 322 33 17 chr10 40238390 40238579 -105350709 - MIR SINE MIR -27 235 37 427 303 141 21 chr10 40238789 40239023 -105350265 + MIR SINE MIR 1 262 0 518 112 0 0 chr10 40239023 40239112 -105350176 + pTR5 LTR ERV1 744 832 -1606 2968 149 102 22 chr10 40239116 40239894 -105349394 + pTR5 LTR ERV1 119 274 -440 318 250 0 0 chr10 40239894 40239978 -105349310 + LTR30 LTR ERV1 541 624 -98 819 71 100 7 chr10 40239978 40240118 -105349170 + pTR5 LTR ERV1 49 201 -2237 412 307 28 40 chr10 40240118 40240294 -105348994 + MIR SINE MIR 79 252 -10 307 225 0 0 chr10 40240588 40240659 -105348629 + MLT2B3 LTR ERVL 1 71 -483 1964 194 45 56 chr10 40240757 40241222 -105348066 + MLT2B3 LTR ERVL 75 534 -20 264 77 0 0 chr10 40242063 40242102 -105347186 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 359 245 90 75 chr10 40242188 40242388 -105346900 - LTR33 LTR ERVL -258 263 61 674 292 51 97 chr10 40242782 40243533 -105345755 - L2 LINE L2 -25 3288 2559 215 287 69 23 chr10 40243605 40243692 -105345596 + MIR SINE MIR 159 249 -13 180 0 0 0 chr10 40245879 40245899 -105343389 + (T)n Simple_repeat Simple_repeat 1 20 0 233 330 71 9 chr10 40246006 40246118 -105343170 + MIR SINE MIR 2 120 -142 1954 119 3 60 chr10 40246158 40246477 -105342811 - AluSx SINE Alu -11 301 1 265 382 83 0 chr10 40246477 40246621 -105342667 + MIR SINE MIR 107 262 0 2248 105 0 0 chr10 40246669 40246963 -105342325 + AluSc SINE Alu 1 294 -15 948 222 42 14 chr10 40247053 40247337 -105341951 - L1MD1 LINE L1 -6 6236 5945 2157 68 61 7 chr10 40247376 40247671 -105341617 + AluY SINE Alu 1 311 0 6051 32 0 0 chr10 40247671 40248419 -105340869 - L1PA2 LINE L1 -1699 4447 3700 7818 18 0 0 chr10 40248419 40250113 -105339175 + L1PA2 LINE L1 4465 6155 0 3102 234 90 78 chr10 40250127 40251361 -105337927 - L1M4 LINE L1 -1242 4904 3686 7123 48 1 1 chr10 40251361 40252942 -105336346 - L1PA6 LINE L1 -5 6149 4570 2187 117 0 0 chr10 40252942 40253232 -105336056 - AluSg SINE Alu -11 299 10 3102 234 90 78 chr10 40253232 40253812 -105335476 - L1M4 LINE L1 -2459 3687 3067 191 314 113 32 chr10 40254230 40254354 -105334934 - MIR SINE MIR -59 203 70 3905 183 19 37 chr10 40255087 40255216 -105334072 + L1MB3 LINE L1 5274 5404 -779 2606 74 14 0 chr10 40255216 40255566 -105333722 + THE1A LTR MaLR 1 355 0 11473 102 6 8 chr10 40255566 40257147 -105332141 + THE1A-int LTR MaLR 1 1579 -1 2597 97 6 0 chr10 40257148 40257499 -105331789 + THE1A LTR MaLR 1 353 -2 3905 183 19 37 chr10 40257499 40258285 -105331003 + L1MB3 LINE L1 5402 6176 -7 550 292 74 10 chr10 40258529 40258731 -105330557 - MIR SINE MIR -16 246 32 274 268 70 0 chr10 40258903 40258974 -105330314 + L2 LINE L2 3238 3313 0 237 240 140 0 chr10 40260380 40260480 -105328808 + L1ME4a LINE L1 5936 6049 -72 556 305 51 58 chr10 40260782 40261074 -105328214 - L2 LINE L2 -2 3311 3022 377 257 59 6 chr10 40261093 40261253 -105328035 - L1MA10 LINE L1 -2 6332 6005 813 229 252 14 chr10 40261315 40261739 -105327549 - L1M4 LINE L1 -1211 4935 4411 2650 94 3 0 chr10 40261942 40262292 -105326996 - THE1A LTR MaLR 0 355 5 3793 102 0 11 chr10 40262567 40263109 -105326179 - L1PB1 LINE L1 -1 6150 5615 2370 149 37 1 chr10 40263116 40263843 -105325445 + L1PB1 LINE L1 4852 5597 -554 2209 287 258 14 chr10 40263843 40265174 -105324114 - L2 LINE L2 -281 3032 1375 457 314 159 45 chr10 40265362 40266141 -105323147 - L2 LINE L2 -191 3081 2220 211 331 41 16 chr10 40266790 40266911 -105322377 - MIR SINE MIR -32 230 107 205 289 0 24 chr10 40267413 40267496 -105321792 + MIR SINE MIR 155 235 -27 357 109 0 0 chr10 40267606 40267661 -105321627 + (TG)n Simple_repeat Simple_repeat 2 56 0 188 338 26 0 chr10 40268147 40268224 -105321064 - L2 LINE L2 -528 2786 2708 180 307 50 50 chr10 40268531 40268632 -105320656 - MIR SINE MIR 0 262 162 * 779 297 60 87 chr10 40268598 40269207 -105320081 + L2 LINE L2 2715 3308 -5 213 391 51 7 chr10 40269215 40269353 -105319935 - MIR SINE MIR -75 187 44 210 207 52 0 chr10 40269644 40269702 -105319586 + MIR SINE MIR 100 160 -102 932 226 26 52 chr10 40269803 40269843 -105319445 - MER58A DNA MER1_type -2196 224 184 2227 114 0 0 chr10 40269843 40270151 -105319137 + AluSg SINE Alu 1 308 -2 932 226 26 52 chr10 40270151 40270340 -105318948 - MER58A DNA MER1_type -2236 184 1 204 309 128 0 chr10 40271020 40271114 -105318174 + L2 LINE L2 2905 3010 -262 1632 193 28 43 chr10 40271209 40271603 -105317685 + MER89 LTR ERV1 172 559 0 22 35 0 0 chr10 40272454 40272483 -105316805 + AT_rich Low_complexity Low_complexity 1 29 0 353 366 84 0 chr10 40272485 40272687 -105316601 + MIR SINE MIR 2 220 -42 188 242 15 61 chr10 40273328 40273394 -105315894 + L2 LINE L2 3167 3229 -84 726 315 99 41 chr10 40273656 40274170 -105315118 - L2 LINE L2 -339 2975 2432 209 350 41 0 chr10 40274180 40274277 -105315011 + L2 LINE L2 2686 2786 -528 381 43 0 0 chr10 40274762 40274809 -105314479 + (CA)n Simple_repeat Simple_repeat 2 48 0 205 289 0 24 chr10 40274913 40274996 -105314292 - MIR SINE MIR -27 235 155 211 331 41 16 chr10 40275498 40275619 -105313669 + MIR SINE MIR 107 230 -32 401 311 173 38 chr10 40276268 40276921 -105312367 + L2 LINE L2 2220 2960 -354 1154 195 87 30 chr10 40276933 40277056 -105312232 - L1MEc LINE L1 -4007 2389 2274 1900 122 45 3 chr10 40277056 40277344 -105311944 - AluSg SINE Alu -10 300 1 1154 195 87 30 chr10 40277344 40277589 -105311699 - L1MEc LINE L1 -4122 2274 2000 336 331 78 24 chr10 40278235 40278401 -105310887 - MIR SINE MIR -26 236 62 2078 120 0 3 chr10 40278415 40278742 -105310546 - AluY SINE Alu 0 311 1 32 0 0 0 chr10 40278804 40278836 -105310452 + AT_rich Low_complexity Low_complexity 1 32 0 2096 95 7 7 chr10 40279769 40280063 -105309225 - AluY SINE Alu -15 296 3 1968 181 59 17 chr10 40280846 40281255 -105308033 - MSTB LTR MaLR 0 426 1 23 0 0 0 chr10 40281378 40281401 -105307887 + AT_rich Low_complexity Low_complexity 1 23 0 34 24 0 0 chr10 40281469 40281510 -105307778 + AT_rich Low_complexity Low_complexity 1 41 0 264 30 0 0 chr10 40281510 40281543 -105307745 + (TG)n Simple_repeat Simple_repeat 2 34 0 25 65 0 0 chr10 40282662 40282708 -105306580 + AT_rich Low_complexity Low_complexity 1 46 0 2050 132 0 0 chr10 40282792 40283079 -105306209 + AluSx SINE Alu 1 287 -25 1633 179 14 10 chr10 40283291 40283588 -105305700 + AluJo SINE Alu 3 300 -12 1149 145 0 0 chr10 40283630 40283796 -105305492 + AluSg/x SINE Alu 129 294 -18 2292 111 0 0 chr10 40283967 40284264 -105305024 - AluSc SINE Alu -10 299 3 314 251 105 59 chr10 40284401 40284526 -105304762 - MER46C DNA MER2_type -45 293 175 1819 146 32 4 chr10 40284526 40284807 -105304481 + AluSq SINE Alu 1 289 -24 314 251 105 59 chr10 40284807 40284915 -105304373 - MER46C DNA MER2_type -163 175 1 1783 128 3 113 chr10 40285032 40285376 -105303912 - AluSp SINE Alu -7 306 1 345 318 54 22 chr10 40285401 40285662 -105303626 - L1MC/D LINE L1 -349 5772 5514 1789 127 36 29 chr10 40286188 40286495 -105302793 - AluSx SINE Alu -3 309 1 860 78 14 42 chr10 40286499 40286641 -105302647 - AluSq/x SINE Alu -175 138 1 2155 108 10 22 chr10 40286673 40286987 -105302301 + AluSp SINE Alu 1 310 -3 2284 96 0 13 chr10 40286989 40287303 -105301985 + AluY SINE Alu 1 310 -1 2237 84 7 17 chr10 40287311 40287607 -105301681 + AluSg SINE Alu 5 297 -13 1130 148 14 67 chr10 40287930 40288153 -105301135 - AluSp SINE Alu -81 232 22 489 161 0 11 chr10 40288166 40288253 -105301035 + AluSp SINE Alu 54 139 -174 2258 109 3 0 chr10 40289842 40290153 -105299135 + AluSx SINE Alu 1 312 0 447 266 27 49 chr10 40292261 40292445 -105296843 - MER104 DNA Tc2 0 180 1 605 274 100 69 chr10 40292537 40292790 -105296498 - MIR SINE MIR -1 261 6 40 0 0 0 chr10 40293207 40293247 -105296041 + AT_rich Low_complexity Low_complexity 1 40 0 290 321 19 0 chr10 40293889 40293995 -105295293 + MER102b DNA MER1_type 233 340 -1 24 67 0 0 chr10 40294048 40294093 -105295195 + AT_rich Low_complexity Low_complexity 1 45 0 241 320 80 13 chr10 40294997 40295072 -105294216 - L2 LINE L2 -50 3222 3143 2031 145 3 10 chr10 40295793 40296097 -105293191 + AluSx SINE Alu 2 303 -9 208 176 0 20 chr10 40296223 40296274 -105293014 + T-rich Low_complexity Low_complexity 3 52 0 292 342 85 20 chr10 40296358 40296557 -105292731 + MIR SINE MIR 20 231 -31 642 181 0 0 chr10 40298313 40298418 -105290870 + U6 snRNA snRNA 1 105 -2 30 45 0 0 chr10 40298870 40298914 -105290374 + AT_rich Low_complexity Low_complexity 1 44 0 750 167 0 0 chr10 40299042 40299168 -105290120 - FLAM_C SINE Alu -17 126 1 215 326 103 11 chr10 40299242 40299398 -105289890 - MIR SINE MIR -41 221 58 300 70 0 0 chr10 40299871 40299914 -105289374 + (TG)n Simple_repeat Simple_repeat 2 44 0 198 0 0 0 chr10 40299913 40299935 -105289353 + (TA)n Simple_repeat Simple_repeat 1 22 0 * 36 40 0 0 chr10 40300202 40300252 -105289036 + AT_rich Low_complexity Low_complexity 1 50 0 15315 61 3 5 chr10 40300324 40302280 -105287008 + L1P LINE L1 6 1957 -4189 1998 219 32 7 chr10 40302337 40302779 -105286509 - LTR22 LTR ERVK -56 453 1 216 0 0 0 chr10 40302804 40302828 -105286460 + (ATTG)n Simple_repeat Simple_repeat 1 24 0 261 211 0 18 chr10 40302828 40302880 -105286408 - FLAM_A SINE Alu -17 116 66 1663 209 55 60 chr10 40302931 40303367 -105285921 - Tigger2a DNA MER2_type 0 434 1 1809 155 19 23 chr10 40304375 40304684 -105284604 + AluSx SINE Alu 3 310 -2 1914 145 16 16 chr10 40305656 40305966 -105283322 - AluSg SINE Alu 0 310 1 546 294 98 20 chr10 40305970 40306225 -105283063 - MLT1L LTR MaLR -221 394 120 939 265 5 5 chr10 40306405 40306458 -105282830 - MER58A DNA MER1_type -2196 224 172 2110 139 0 0 chr10 40306458 40306753 -105282535 + AluSg SINE Alu 2 296 -14 939 265 5 5 chr10 40306753 40306922 -105282366 - MER58A DNA MER1_type -2247 173 2 29 90 0 0 chr10 40307826 40307904 -105281384 + AT_rich Low_complexity Low_complexity 1 78 0 1996 104 3 77 chr10 40308277 40308604 -105280684 + AluSx SINE Alu 1 303 -9 3002 119 6 53 chr10 40309566 40310079 -105279209 - LTR22B LTR ERVK -3 489 1 259 258 16 0 chr10 40311224 40311286 -105278002 - MER5A DNA MER1_type -118 71 9 30 0 0 0 chr10 40311544 40311574 -105277714 + AT_rich Low_complexity Low_complexity 1 30 0 26 0 0 0 chr10 40313100 40313126 -105276162 + AT_rich Low_complexity Low_complexity 1 26 0 252 158 0 0 chr10 40313397 40313454 -105275834 + (TG)n Simple_repeat Simple_repeat 2 58 0 420 216 302 0 chr10 40317360 40317499 -105271789 - MER5A DNA MER1_type 0 189 9 213 94 0 0 chr10 40317995 40318027 -105271261 + (TATG)n Simple_repeat Simple_repeat 4 35 0 2171 99 7 0 chr10 40318884 40319178 -105270110 + AluY SINE Alu 1 296 -15 22 35 0 0 chr10 40319445 40319474 -105269814 + AT_rich Low_complexity Low_complexity 1 29 0 1599 168 0 25 chr10 40320477 40320757 -105268531 - AluSx SINE Alu -39 273 1 1544 196 20 7 chr10 40322319 40322625 -105266663 + AluSx SINE Alu 1 310 -2 2038 80 53 17 chr10 40322783 40323083 -105266205 - AluY SINE Alu 0 311 1 233 319 32 0 chr10 40323415 40323509 -105265779 - Charlie1 DNA MER1_type -2563 198 102 22 0 0 0 chr10 40323693 40323715 -105265573 + AT_rich Low_complexity Low_complexity 1 22 0 1102 105 0 7 chr10 40324058 40324211 -105265077 + AluY SINE Alu 3 154 -157 306 207 0 0 chr10 40324211 40324269 -105265019 - MER5A DNA MER1_type -123 66 9 29 0 0 0 chr10 40324538 40324567 -105264721 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr10 40325066 40325087 -105264201 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr10 40326098 40326126 -105263162 + AT_rich Low_complexity Low_complexity 1 28 0 285 155 0 0 chr10 40326399 40326457 -105262831 + (TG)n Simple_repeat Simple_repeat 1 58 0 185 338 26 0 chr10 40327431 40327508 -105261780 - L2 LINE L2 -528 2786 2708 186 307 50 50 chr10 40327814 40327915 -105261373 - MIR SINE MIR 0 262 162 * 767 297 60 87 chr10 40327881 40328490 -105260798 + L2 LINE L2 2715 3308 -5 215 391 51 7 chr10 40328498 40328636 -105260652 - MIR SINE MIR -75 187 44 206 207 52 0 chr10 40328927 40328985 -105260303 + MIR SINE MIR 100 160 -102 927 226 26 52 chr10 40329086 40329126 -105260162 - MER58A DNA MER1_type -2196 224 184 2209 114 0 0 chr10 40329126 40329434 -105259854 + AluSg SINE Alu 1 308 -2 927 226 26 52 chr10 40329434 40329623 -105259665 - MER58A DNA MER1_type -2236 184 1 202 309 128 0 chr10 40330303 40330397 -105258891 + L2 LINE L2 2905 3010 -262 1639 190 28 43 chr10 40330492 40330886 -105258402 + MER89 LTR ERV1 172 559 0 22 35 0 0 chr10 40331737 40331766 -105257522 + AT_rich Low_complexity Low_complexity 1 29 0 351 366 84 0 chr10 40331768 40331970 -105257318 + MIR SINE MIR 2 220 -42 186 242 15 61 chr10 40332611 40332677 -105256611 + L2 LINE L2 3167 3229 -84 721 315 99 41 chr10 40332939 40333453 -105255835 - L2 LINE L2 -339 2975 2432 207 350 41 0 chr10 40333463 40333560 -105255728 + L2 LINE L2 2686 2786 -528 324 102 0 0 chr10 40334045 40334094 -105255194 + (CA)n Simple_repeat Simple_repeat 2 50 0 209 289 0 24 chr10 40334202 40334285 -105255003 - MIR SINE MIR -27 235 155 216 331 41 16 chr10 40334787 40334908 -105254380 + MIR SINE MIR 107 230 -32 478 320 148 43 chr10 40335557 40336506 -105252782 + L2 LINE L2 2220 3306 -7 2194 287 258 14 chr10 40336520 40337851 -105251437 + L2 LINE L2 1375 3032 -281 2376 149 41 1 chr10 40337851 40338581 -105250707 - L1PB1 LINE L1 -554 5597 4845 3789 102 0 11 chr10 40338585 40339127 -105250161 + L1PB1 LINE L1 5615 6150 -1 2632 94 3 0 chr10 40339402 40339752 -105249536 + THE1A LTR MaLR 5 355 0 640 260 137 13 chr10 40339990 40340378 -105248910 + L1M4 LINE L1 4454 4935 -1211 385 257 59 6 chr10 40340440 40340600 -105248688 + L1MA10 LINE L1 6005 6332 -2 537 312 51 58 chr10 40340619 40340911 -105248377 + L2 LINE L2 3022 3311 -2 249 240 140 0 chr10 40341210 40341310 -105247978 - L1ME4a LINE L1 -72 6049 5936 277 268 70 0 chr10 40342716 40342787 -105246501 - L2 LINE L2 0 3313 3238 528 302 74 10 chr10 40342959 40343161 -105246127 + MIR SINE MIR 32 246 -16 4364 182 23 39 chr10 40343404 40344190 -105245098 - L1MB3 LINE L1 -7 6176 5379 2569 97 6 0 chr10 40344190 40344541 -105244747 - THE1A LTR MaLR -2 353 1 11290 102 6 8 chr10 40344541 40346123 -105243165 - THE1A-int LTR MaLR 0 1580 1 2566 74 14 0 chr10 40346123 40346473 -105242815 - THE1A LTR MaLR 0 355 1 4364 182 23 39 chr10 40346473 40346601 -105242687 - L1MB3 LINE L1 -801 5382 5275 210 314 113 32 chr10 40347335 40347459 -105241829 + MIR SINE MIR 70 203 -59 235 352 19 0 chr10 40347773 40347878 -105241410 - MER94 DNA DNA 0 134 28 3667 236 88 76 chr10 40347881 40348457 -105240831 + L1M4 LINE L1 3071 3639 -2507 2139 117 0 0 chr10 40348457 40348747 -105240541 + AluSg SINE Alu 10 299 -11 7085 49 3 5 chr10 40348747 40350328 -105238960 + L1PA6 LINE L1 4570 6149 -5 3667 236 88 76 chr10 40350328 40351562 -105237726 + L1M4 LINE L1 3638 4904 -1242 1349 19 0 0 chr10 40351576 40351734 -105237554 - L1PA2 LINE L1 0 6155 5998 211 194 0 0 chr10 40353026 40353062 -105236226 + (TATG)n Simple_repeat Simple_repeat 4 39 0 21 0 0 0 chr10 40353487 40353508 -105235780 + AT_rich Low_complexity Low_complexity 1 21 0 1777 91 0 0 chr10 40353919 40354151 -105235137 + AluY SINE Alu 1 232 -79 1754 168 0 23 chr10 40354246 40354549 -105234739 - AluSx SINE Alu -16 296 1 739 176 0 7 chr10 40356113 40356255 -105233033 + AluSq/x SINE Alu 1 141 -171 1840 95 60 18 chr10 40356720 40357005 -105232283 - AluY SINE Alu -14 297 1 233 319 32 0 chr10 40357337 40357431 -105231857 - Charlie1 DNA MER1_type -2563 198 102 1152 92 0 0 chr10 40357967 40358119 -105231169 + AluY SINE Alu 3 154 -157 229 241 0 0 chr10 40358119 40358177 -105231111 - MER5A DNA MER1_type -123 66 9 255 79 0 0 chr10 40358430 40358468 -105230820 + (T)n Simple_repeat Simple_repeat 1 38 0 21 0 0 0 chr10 40358950 40358971 -105230317 + AT_rich Low_complexity Low_complexity 1 21 0 285 155 0 0 chr10 40360279 40360337 -105228951 + (TG)n Simple_repeat Simple_repeat 1 58 0 399 195 328 0 chr10 40364271 40364399 -105224889 - MER5A DNA MER1_type 0 189 20 435 106 0 0 chr10 40364914 40364980 -105224308 + (TA)n Simple_repeat Simple_repeat 2 67 0 21 0 0 0 chr10 40365437 40365458 -105223830 + AT_rich Low_complexity Low_complexity 1 21 0 1777 91 0 0 chr10 40365869 40366101 -105223187 + AluY SINE Alu 1 232 -79 1754 168 0 23 chr10 40366196 40366499 -105222789 - AluSx SINE Alu -16 296 1 1560 184 20 3 chr10 40368064 40368368 -105220920 + AluSx SINE Alu 1 309 -3 1896 90 57 23 chr10 40368491 40368791 -105220497 - AluY SINE Alu -1 310 1 233 319 32 0 chr10 40369123 40369217 -105220071 - Charlie1 DNA MER1_type -2563 198 102 1081 105 0 0 chr10 40369763 40369915 -105219373 + AluY SINE Alu 3 154 -157 253 224 0 0 chr10 40369915 40369973 -105219315 - MER5A DNA MER1_type -123 66 9 31 26 0 0 chr10 40370221 40370259 -105219029 + AT_rich Low_complexity Low_complexity 1 38 0 285 155 0 0 chr10 40372093 40372151 -105217137 + (TG)n Simple_repeat Simple_repeat 1 58 0 337 233 0 0 chr10 40376142 40376215 -105213073 - MER5A DNA MER1_type -108 81 9 19783 60 16 2 chr10 40376374 40379624 -105209664 + L1PA6 LINE L1 2729 6018 -136 6815 60 8 0 chr10 40379724 40381418 -105207870 + L1PA6 LINE L1 4419 6154 0 321 267 139 0 chr10 40381610 40381696 -105207592 - MER5A DNA MER1_type -83 106 9 2156 111 0 16 chr10 40382314 40382629 -105206659 + AluSx SINE Alu 1 310 -2 26 30 0 0 chr10 40383429 40383462 -105205826 + AT_rich Low_complexity Low_complexity 1 33 0 738 323 8 23 chr10 40384097 40384354 -105204934 + L1PA15-16 LINE L1 1309 1561 -5288 511 316 31 18 chr10 40384351 40384576 -105204712 + L1PA15-16 LINE L1 1350 1577 -5273 * 587 199 37 27 chr10 40384699 40384917 -105204371 - L1MC1 LINE L1 -343 6059 5796 * 657 249 77 30 chr10 40384915 40385027 -105204261 - L1MC1 LINE L1 -2402 3813 3708 2086 201 34 0 chr10 40385027 40385441 -105203847 - MSTA LTR MaLR 0 428 1 657 249 77 30 chr10 40385441 40385625 -105203663 - L1MC1 LINE L1 -2507 3708 3503 6737 70 5 0 chr10 40385774 40386934 -105202354 - L1PA7 LINE L1 -3 6151 4992 7027 30 10 0 chr10 40386949 40387783 -105201505 - L1PA4 LINE L1 -2 6153 5312 5981 42 1 1 chr10 40387784 40388521 -105200767 + L1P LINE L1 4099 4835 -1311 1102 106 6 0 chr10 40388518 40388678 -105200610 - L1PA7 LINE L1 -1139 5007 4847 * 443 321 68 16 chr10 40388678 40388927 -105200361 - L1MC1 LINE L1 -2724 3491 3230 1387 246 20 14 chr10 40388944 40389302 -105199986 - MLT1A1 LTR MaLR 0 365 6 933 265 43 55 chr10 40389308 40389730 -105199558 - L1MC1 LINE L1 -3009 3206 2790 1284 227 40 99 chr10 40389746 40390348 -105198940 - L1MC1 LINE L1 -3524 2691 2193 213 39 0 0 chr10 40390348 40390374 -105198914 + (TA)n Simple_repeat Simple_repeat 1 26 0 1284 227 40 99 chr10 40390374 40390610 -105198678 - L1MC1 LINE L1 -4022 2193 1944 309 268 35 63 chr10 40390760 40390902 -105198386 - L1MC1 LINE L1 -5265 1131 994 1081 346 73 24 chr10 40390906 40391579 -105197709 - L1MC1 LINE L1 -5651 745 40 338 422 64 15 chr10 40391587 40391914 -105197374 + L2 LINE L2 2930 3272 0 23 33 0 0 chr10 40392849 40392879 -105196409 + AT_rich Low_complexity Low_complexity 1 30 0 24 0 0 0 chr10 40393016 40393040 -105196248 + AT_rich Low_complexity Low_complexity 1 24 0 25 51 0 0 chr10 40394287 40394326 -105194962 + AT_rich Low_complexity Low_complexity 1 39 0 425 50 17 0 chr10 40395794 40395854 -105193434 + (TA)n Simple_repeat Simple_repeat 2 62 0 280 369 62 23 chr10 40396577 40396753 -105192535 - L2 LINE L2 -410 2904 2722 2412 192 21 29 chr10 40397890 40398411 -105190877 - L1MB8 LINE L1 -9 6169 5653 252 215 154 0 chr10 40398926 40398991 -105190297 - Tigger4(Zombi) DNA MER2_type -2654 77 3 340 224 0 0 chr10 40399004 40399062 -105190226 - Tigger5 DNA MER2_type -6 2317 2260 23 33 0 0 chr10 40399596 40399626 -105189662 + AT_rich Low_complexity Low_complexity 1 30 0 27 81 0 0 chr10 40399739 40399801 -105189487 + AT_rich Low_complexity Low_complexity 1 62 0 320 127 25 76 chr10 40400183 40400262 -105189026 + MER34C LTR ERV1 423 497 -88 218 105 26 0 chr10 40400282 40400320 -105188968 + (TA)n Simple_repeat Simple_repeat 2 40 0 28 48 0 0 chr10 40400930 40400972 -105188316 + AT_rich Low_complexity Low_complexity 1 42 0 1080 239 71 14 chr10 40401604 40401901 -105187387 - L1MB8 LINE L1 -5 6173 5860 24 0 0 0 chr10 40401901 40401925 -105187363 + AT_rich Low_complexity Low_complexity 1 24 0 2538 17 0 7 chr10 40401925 40402223 -105187065 - L1PA5 LINE L1 -13 6141 5846 433 17 172 0 chr10 40402221 40402279 -105187009 + L1P LINE L1 2189 2256 -3890 * 2637 200 74 10 chr10 40402284 40403316 -105185972 - L1MB8 LINE L1 -304 5874 4771 726 300 95 5 chr10 40404675 40404934 -105184354 - MLT1G1 LTR MaLR -11 584 217 281 163 0 0 chr10 40405084 40405127 -105184161 - MLT1G1 LTR MaLR -441 126 84 1149 171 27 35 chr10 40405161 40405418 -105183870 - L1MA5 LINE L1 -3 6297 6043 1025 95 23 95 chr10 40405590 40405811 -105183477 - L1MA3 LINE L1 -1 6304 6100 299 186 0 0 chr10 40406958 40407017 -105182271 - L1MA9 LINE L1 -37 6275 6217 363 23 0 0 chr10 40408460 40408504 -105180784 + (TA)n Simple_repeat Simple_repeat 1 44 0 189 0 0 0 chr10 40408503 40408524 -105180764 + (GA)n Simple_repeat Simple_repeat 2 22 0 * 756 178 53 20 chr10 40408570 40408722 -105180566 + FAM SINE Alu 1 48 -1 32 26 0 0 chr10 40410109 40410148 -105179140 + AT_rich Low_complexity Low_complexity 1 39 0 220 309 0 0 chr10 40410298 40410353 -105178935 + L2 LINE L2 3211 3265 -7 2462 72 3 0 chr10 40411566 40411873 -105177415 - AluY SINE Alu -3 308 1 258 333 44 0 chr10 40412994 40413108 -105176180 + MIR3 SINE MIR 38 156 -52 1003 47 0 0 chr10 40414143 40414271 -105175017 - L1PA4 LINE L1 -3 6152 6025 40 21 0 0 chr10 40417087 40417134 -105172154 + AT_rich Low_complexity Low_complexity 1 47 0 27 87 0 0 chr10 40417153 40417222 -105172066 + AT_rich Low_complexity Low_complexity 1 69 0 1215 261 91 7 chr10 40417688 40418369 -105170919 - L1MC4 LINE L1 -140 7902 7012 2185 221 108 13 chr10 40418397 40418940 -105170348 - Tigger2 DNA MER2_type -2029 689 76 2447 39 0 32 chr10 40418940 40419248 -105170040 - AluY SINE Alu -12 299 2 2185 221 108 13 chr10 40419248 40419333 -105169955 - Tigger2 DNA MER2_type -2642 76 1 2611 194 20 17 chr10 40419387 40419975 -105169313 - MER6A DNA MER2_type -1 604 275 893 247 92 4 chr10 40420083 40420322 -105168966 - MER6A DNA MER2_type -344 261 2 590 265 131 39 chr10 40420904 40421293 -105167995 - L1M4 LINE L1 -1645 4501 4077 1161 275 32 47 chr10 40421377 40421882 -105167406 - MLT1E LTR MaLR 0 593 102 253 273 62 55 chr10 40421976 40422232 -105167056 - L1M4 LINE L1 -2160 3986 3729 552 202 75 87 chr10 40422547 40422720 -105166568 - MER20 DNA MER1_type -1 218 48 481 179 0 0 chr10 40422746 40422824 -105166464 + AluS SINE Alu 3 80 -233 1057 143 61 15 chr10 40422838 40423087 -105166201 - LTR54 LTR ERV1 0 510 219 1250 104 14 45 chr10 40423310 40423395 -105165893 + L1PA13 LINE L1 5951 6037 -126 2448 57 0 35 chr10 40423395 40423711 -105165577 + AluY SINE Alu 1 305 -6 1250 104 14 45 chr10 40423711 40423845 -105165443 + L1PA13 LINE L1 6037 6163 0 289 305 61 49 chr10 40426036 40426200 -105163088 - L2 LINE L2 -203 3069 2904 1710 206 19 19 chr10 40426325 40426690 -105162598 + MLT1A1 LTR MaLR 1 365 0 529 235 90 12 chr10 40428499 40428665 -105160623 + MIR SINE MIR 74 252 -10 681 177 89 0 chr10 40429011 40429135 -105160153 + MER3 DNA MER1_type 3 137 -72 3211 195 25 68 chr10 40429135 40429444 -105159844 - L1MB7 LINE L1 -10 6174 5853 2313 97 3 10 chr10 40429444 40429755 -105159533 - AluY SINE Alu -2 309 1 3211 195 25 68 chr10 40429755 40430479 -105158809 - L1MB7 LINE L1 -331 5853 5099 2404 94 3 0 chr10 40430479 40430787 -105158501 - AluY SINE Alu -2 309 1 3211 195 25 68 chr10 40430787 40430964 -105158324 - L1MB7 LINE L1 -1085 5099 5025 1356 181 34 4 chr10 40430964 40431230 -105158058 + L1PB4 LINE L1 5883 6156 0 3211 195 25 68 chr10 40431230 40431256 -105158032 - L1MB7 LINE L1 -1159 5025 4999 990 160 15 15 chr10 40431269 40431469 -105157819 - L1MB4 LINE L1 -2 6178 5979 315 233 0 0 chr10 40431481 40431554 -105157734 + MER3 DNA MER1_type 137 209 0 492 314 117 21 chr10 40431640 40432062 -105157226 + L2 LINE L2 2661 3128 -185 1072 162 23 6 chr10 40432071 40432244 -105157044 - AluJo SINE Alu -21 291 116 264 330 188 0 chr10 40432295 40432407 -105156881 + L2 LINE L2 3180 3312 -1 5877 118 2 6 chr10 40432559 40433548 -105155740 - L1P LINE L1 -2354 3792 2808 2860 76 0 8 chr10 40433566 40433947 -105155341 + L1PA8 LINE L1 5788 6165 -7 1351 251 62 44 chr10 40433971 40434487 -105154801 + L1ME3A LINE L1 4507 5044 -1111 2296 109 0 0 chr10 40434487 40434791 -105154497 + AluY SINE Alu 1 304 -7 1351 251 62 44 chr10 40434791 40435052 -105154236 + L1ME3A LINE L1 5044 5299 -856 1930 251 100 14 chr10 40435089 40435738 -105153550 + L1ME3A LINE L1 5408 6112 -58 312 243 59 22 chr10 40435801 40435937 -105153351 + L1MC5 LINE L1 7785 7925 -36 1412 149 43 0 chr10 40436606 40436861 -105152427 + L1PA16 LINE L1 5896 6161 -5 252 288 120 39 chr10 40438588 40438921 -105150367 - L1ME4a LINE L1 -31 6090 5731 3417 131 0 42 chr10 40439063 40439612 -105149676 - MER1A DNA MER1_type -1 526 1 563 261 0 50 chr10 40439615 40439795 -105149493 - L2 LINE L2 -684 2630 2460 239 260 30 80 chr10 40441041 40441141 -105148147 - MIR3 SINE MIR 0 208 114 274 325 130 15 chr10 40441191 40441572 -105147716 + MER115 DNA AcHobo 6 443 -250 244 108 0 0 chr10 40442383 40442420 -105146868 - tRNA-Met-i tRNA tRNA -38 37 1 2119 125 3 3 chr10 40442430 40442733 -105146555 - AluSx SINE Alu -3 309 7 2009 142 17 0 chr10 40442768 40443064 -105146224 - AluSq SINE Alu -12 301 1 2145 129 0 0 chr10 40443237 40443531 -105145757 - AluSq SINE Alu -19 294 1 215 274 150 43 chr10 40444282 40444455 -105144833 + MIR SINE MIR 38 225 -37 317 271 77 50 chr10 40444577 40444662 -105144626 + MER5A DNA MER1_type 4 85 -104 318 26 0 0 chr10 40444662 40444701 -105144587 + (TC)n Simple_repeat Simple_repeat 2 40 0 477 0 0 0 chr10 40444702 40444755 -105144533 + (CA)n Simple_repeat Simple_repeat 2 54 0 317 271 77 50 chr10 40444755 40444848 -105144440 + MER5A DNA MER1_type 84 189 0 181 172 0 0 chr10 40446861 40446890 -105142398 - MIR SINE MIR -14 248 220 13866 104 3 3 chr10 40447339 40449785 -105139503 - L1P3 LINE L1 -532 5622 3178 3444 43 0 0 chr10 40449780 40450224 -105139064 - L1P2 LINE L1 -378 5776 5333 * 4707 115 47 76 chr10 40450224 40451070 -105138218 - LTR12 LTR ERV1 0 826 5 7953 123 14 14 chr10 40451076 40452849 -105136439 - HERV9 LTR ERV1 0 8399 504 942 196 45 11 chr10 40454115 40454294 -105134994 + AluJo SINE Alu 121 305 -7 2045 136 3 0 chr10 40454907 40455201 -105134087 + AluSx SINE Alu 1 295 -17 1811 171 0 0 chr10 40456539 40456866 -105132422 - AluY SINE Alu 0 327 1 1696 124 4 19 chr10 40457834 40458100 -105131188 + AluY SINE Alu 1 262 -49 3126 74 11 0 chr10 40458230 40458686 -105130602 - HERV9 LTR ERV1 -1544 6855 6395 34122 102 27 25 chr10 40458686 40466506 -105122782 - HERV9 LTR ERV1 0 2438 17 4303 45 2 1 chr10 40466509 40467052 -105122236 - L1P LINE L1 -804 5347 4807 * 14278 158 97 27 chr10 40467050 40470017 -105119271 - L1P3 LINE L1 -2962 3184 12 233 338 88 7 chr10 40470299 40470447 -105118841 + MLT1K LTR MaLR 17 176 -412 2412 157 105 10 chr10 40470631 40471040 -105118248 + MER83 LTR ERV1 1 448 0 567 231 90 63 chr10 40471095 40471350 -105117938 + L1ME3A LINE L1 5904 6165 -5 21 0 0 0 chr10 40472662 40472683 -105116605 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 40473440 40473461 -105115827 + AT_rich Low_complexity Low_complexity 1 21 0 2288 105 0 0 chr10 40473772 40474067 -105115221 - AluSg SINE Alu -15 295 1 270 56 0 0 chr10 40475186 40475222 -105114066 + (TC)n Simple_repeat Simple_repeat 2 37 0 252 0 0 0 chr10 40475222 40475250 -105114038 + (CA)n Simple_repeat Simple_repeat 1 28 0 395 326 126 49 chr10 40476086 40476495 -105112793 - L2 LINE L2 -377 2937 2476 2507 210 58 67 chr10 40476495 40477224 -105112064 - MER72 LTR ERV1 0 722 1 395 326 126 49 chr10 40477224 40477344 -105111944 - L2 LINE L2 -838 2476 2367 546 206 31 0 chr10 40477584 40477681 -105111607 + Tigger3(Golem) DNA MER2_type 2928 3027 -2 1352 194 4 16 chr10 40478241 40478499 -105110789 + 7SLRNA srpRNA srpRNA 54 308 -12 22 0 0 0 chr10 40478499 40478521 -105110767 + AT_rich Low_complexity Low_complexity 1 22 0 360 0 0 0 chr10 40478521 40478561 -105110727 + (TG)n Simple_repeat Simple_repeat 1 40 0 431 257 184 7 chr10 40478578 40478730 -105110558 + MIR SINE MIR 25 203 -59 210 143 0 0 chr10 40479365 40479400 -105109888 + (GA)n Simple_repeat Simple_repeat 2 36 0 369 317 67 12 chr10 40479781 40479945 -105109343 - MIR SINE MIR -88 174 2 509 278 168 0 chr10 40481796 40481969 -105107319 - MIR SINE MIR -22 240 39 1276 203 63 40 chr10 40481976 40482325 -105106963 + MLT1A2 LTR MaLR 1 357 -17 585 158 20 0 chr10 40483801 40483902 -105105386 - HY1 scRNA scRNA 0 112 10 2410 251 40 15 chr10 40484037 40484713 -105104575 + L1ME2 LINE L1 5456 6148 -16 1295 179 22 93 chr10 40485457 40485769 -105103519 - AluJo SINE Alu -12 290 1 618 133 47 0 chr10 40486535 40486663 -105102625 + GA-rich Low_complexity Low_complexity 3 136 0 287 87 22 0 chr10 40487248 40487294 -105101994 - L1MA4A LINE L1 -6 6297 6251 396 286 92 5 chr10 40488061 40488267 -105101021 - L1ME LINE L1 -304 5817 5594 916 196 45 11 chr10 40490181 40490360 -105098928 + AluJo SINE Alu 121 305 -7 2024 139 3 0 chr10 40490973 40491267 -105098021 + AluSx SINE Alu 1 295 -17 1745 171 0 4 chr10 40492604 40492931 -105096357 - AluSg SINE Alu 0 326 1 252 0 0 0 chr10 40493098 40493126 -105096162 + (T)n Simple_repeat Simple_repeat 1 28 0 2055 147 0 3 chr10 40493668 40493981 -105095307 - AluSx SINE Alu 0 312 1 4994 62 9 0 chr10 40496928 40497510 -105091778 - LTR14C LTR ERVK 0 587 1 1482 205 27 104 chr10 40498793 40499320 -105089968 - MLT1E2 LTR MaLR -137 489 4 256 275 81 38 chr10 40499344 40499555 -105089733 - L1MEd LINE L1 -5219 900 681 354 304 30 30 chr10 40499596 40499764 -105089524 - L1MEd LINE L1 -5554 565 398 272 224 13 66 chr10 40499829 40499905 -105089383 - L1MEd LINE L1 -5744 375 304 256 268 14 0 chr10 40500076 40500147 -105089141 - L1MEd LINE L1 -6046 73 2 211 226 148 61 chr10 40500193 40500308 -105088980 + L2 LINE L2 1891 2015 -1299 1980 153 41 25 chr10 40500364 40500731 -105088557 - L1PA13 LINE L1 0 6163 5791 2147 111 3 33 chr10 40500972 40501279 -105088009 - AluSp SINE Alu -14 299 2 1953 145 0 0 chr10 40501280 40501562 -105087726 - AluSq SINE Alu -31 282 1 1603 228 58 90 chr10 40501576 40502208 -105087080 + LTR9 LTR ERV1 1 612 0 18761 175 41 29 chr10 40502208 40503633 -105085655 + HUERS-P3 LTR ERV1 1 1408 -7511 2259 106 3 0 chr10 40503633 40503936 -105085352 + AluY SINE Alu 1 304 -7 18761 175 41 29 chr10 40503936 40505800 -105083488 + HUERS-P3 LTR ERV1 1408 3338 -5581 2167 17 0 0 chr10 40505800 40506036 -105083252 - AluYb8 SINE Alu -11 307 72 18761 175 41 29 chr10 40506036 40506312 -105082976 + HUERS-P3 LTR ERV1 3338 3609 -5310 1153 199 32 0 chr10 40506312 40506528 -105082760 + HUERS-P3 LTR ERV1 6016 6238 -2681 974 282 72 9 chr10 40506528 40506847 -105082441 + LTR19C LTR ERV1 441 779 0 258 309 79 29 chr10 40506852 40506991 -105082297 + L2 LINE L2 2702 2847 -467 236 256 0 39 chr10 40507012 40507090 -105082198 - LTR67 LTR ERVL 0 557 483 3875 110 4 4 chr10 40507545 40508056 -105081232 + MER9 LTR ERVK 1 511 0 28 0 0 0 chr10 40508271 40508299 -105080989 + AT_rich Low_complexity Low_complexity 1 28 0 1057 188 43 13 chr10 40508409 40508643 -105080645 - L1PB2 LINE L1 -4284 2579 2339 * 7826 212 17 50 chr10 40508631 40511342 -105077946 + L1PB2 LINE L1 2573 5247 -1615 1507 173 34 43 chr10 40511342 40511666 -105077622 + THE1C LTR MaLR 1 321 -54 686 43 75 0 chr10 40511672 40511866 -105077422 + (TA)n Simple_repeat Simple_repeat 1 208 0 28 0 0 0 chr10 40511876 40511904 -105077384 + AT_rich Low_complexity Low_complexity 1 28 0 253 220 20 0 chr10 40511912 40511962 -105077326 + THE1C LTR MaLR 305 355 0 3983 191 33 16 chr10 40511976 40513388 -105075900 + L1PB2 LINE L1 5258 6694 -173 695 138 76 0 chr10 40513396 40513541 -105075747 + L1PB2 LINE L1 5254 5409 -742 823 116 77 7 chr10 40513544 40513699 -105075589 + L1PB2 LINE L1 5984 6149 -2 29 0 0 0 chr10 40513699 40513728 -105075560 + AT_rich Low_complexity Low_complexity 1 29 0 3625 186 41 11 chr10 40514191 40514994 -105074294 - L1MA4A LINE L1 -1 7004 6178 4058 17 0 2 chr10 40514999 40515466 -105073822 - L1PA3 LINE L1 -7 6148 5683 7430 218 85 23 chr10 40515467 40516549 -105072739 - L1MA4A LINE L1 -744 6104 5091 1991 143 10 3 chr10 40516549 40516856 -105072432 - AluSx SINE Alu -3 309 1 7430 218 85 23 chr10 40516856 40518164 -105071124 - L1MA4A LINE L1 -1757 5091 3632 274 30 0 0 chr10 40518187 40518220 -105071068 + L1PA6 LINE L1 5895 5927 -227 27 0 0 0 chr10 40520493 40520520 -105068768 + AT_rich Low_complexity Low_complexity 1 27 0 1914 236 50 43 chr10 40520691 40520854 -105068434 - L1MA4A LINE L1 -3258 3590 3430 2074 96 0 0 chr10 40520854 40521170 -105068118 - AluY SINE Alu 0 318 3 1914 236 50 43 chr10 40521170 40521990 -105067298 - L1MA4A LINE L1 -3418 3430 2602 3750 230 45 20 chr10 40522000 40523798 -105065490 - L1M2 LINE L1 -3226 3623 1776 587 204 14 14 chr10 40523799 40523946 -105065342 + L1MA10 LINE L1 6184 6330 -4 1925 254 60 21 chr10 40523950 40524465 -105064823 + MLT1H1 LTR MaLR 19 553 -2 3076 302 31 37 chr10 40524648 40524733 -105064555 - L1M2 LINE L1 -5036 1814 1730 2279 77 0 13 chr10 40524733 40525032 -105064256 + AluY SINE Alu 2 296 -15 3076 302 31 37 chr10 40525032 40526091 -105063197 - L1M2 LINE L1 -5120 1730 677 1307 291 61 104 chr10 40526192 40526866 -105062422 - L1M2 LINE L1 -6200 649 5 475 252 147 28 chr10 40526867 40527085 -105062203 - L1M4 LINE L1 -1828 4318 4075 2878 82 14 5 chr10 40527127 40527541 -105061747 - L1PA6 LINE L1 -11 6143 5726 428 286 5 70 chr10 40528664 40528849 -105060439 + MLT1D LTR MaLR 3 175 -330 23 0 0 0 chr10 40529174 40529197 -105060091 + AT_rich Low_complexity Low_complexity 1 23 0 300 277 135 0 chr10 40530850 40530998 -105058290 - L1MEc LINE L1 -4916 1480 1313 1845 92 46 11 chr10 40531031 40531292 -105057996 - AluY SINE Alu -7 304 35 2314 94 0 0 chr10 40531294 40531603 -105057685 - AluY SINE Alu -2 309 1 23 0 0 0 chr10 40531614 40531637 -105057651 + AT_rich Low_complexity Low_complexity 1 23 0 664 163 36 48 chr10 40533022 40533188 -105056100 + L1MA7 LINE L1 5980 6143 -148 * 2502 198 64 29 chr10 40533186 40533777 -105055511 - L1MA4A LINE L1 -11 6292 5681 8891 222 35 19 chr10 40533785 40534293 -105054995 - L1MA4A LINE L1 -1474 4672 4174 5420 149 25 39 chr10 40534293 40535378 -105053910 + MER11C LTR ERVK 2 1071 0 8891 222 35 19 chr10 40535378 40537225 -105052063 - L1MA4A LINE L1 -1972 4174 2279 23 33 0 0 chr10 40537463 40537493 -105051795 + AT_rich Low_complexity Low_complexity 1 30 0 22 56 0 0 chr10 40538220 40538256 -105051032 + AT_rich Low_complexity Low_complexity 1 36 0 1845 137 0 17 chr10 40538491 40538790 -105050498 - AluSq SINE Alu -14 299 6 1129 283 67 40 chr10 40538857 40539699 -105049589 + L1MB7 LINE L1 3396 4259 -1887 23 54 0 0 chr10 40539746 40539783 -105049505 + AT_rich Low_complexity Low_complexity 1 37 0 1291 301 72 17 chr10 40539783 40541241 -105048047 + L1MB7 LINE L1 4472 6174 -10 1781 220 64 10 chr10 40541371 40541776 -105047512 - L1PA16 LINE L1 -73 6093 5667 23 0 0 0 chr10 40541776 40541799 -105047489 + AT_rich Low_complexity Low_complexity 1 23 0 5062 190 42 20 chr10 40541808 40541843 -105047445 - L1PA16 LINE L1 -638 5528 5495 228 35 0 0 chr10 40541843 40541872 -105047416 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5062 190 42 20 chr10 40541872 40543252 -105046036 - L1PA16 LINE L1 -671 5495 4089 288 111 0 0 chr10 40543428 40543473 -105045815 + (TTTA)n Simple_repeat Simple_repeat 1 45 0 2405 184 39 19 chr10 40543479 40544012 -105045276 - L1MA6 LINE L1 -6 6294 5751 406 224 0 5 chr10 40544012 40544116 -105045172 - L1M4 LINE L1 -503 6373 6273 * 5177 254 43 36 chr10 40544112 40544461 -105044827 - L1M4 LINE L1 -892 5956 5611 2079 101 0 32 chr10 40544461 40544769 -105044519 + AluY SINE Alu 1 298 -13 5177 254 43 36 chr10 40544769 40545807 -105043481 - L1M4 LINE L1 -1237 5611 4582 2159 96 0 33 chr10 40545807 40546108 -105043180 - AluY SINE Alu -20 291 1 5177 254 43 36 chr10 40546108 40546478 -105042810 - L1M4 LINE L1 -2266 4582 4180 2225 92 0 3 chr10 40546478 40546771 -105042517 - AluY SINE Alu -19 292 1 5177 254 43 36 chr10 40546771 40546987 -105042301 - L1M4 LINE L1 -2668 4180 3967 1586 187 45 15 chr10 40547407 40547739 -105041549 + MER2 DNA MER2_type 2 343 -1 31 68 0 0 chr10 40548467 40548526 -105040762 + AT_rich Low_complexity Low_complexity 1 59 0 250 319 29 58 chr10 40548556 40548694 -105040594 - LTR45 LTR ERV1 0 525 392 9307 215 67 28 chr10 40549036 40550951 -105038337 - L1MA4A LINE L1 -1 7004 5165 2073 133 0 13 chr10 40550951 40551267 -105038021 - AluSx SINE Alu 0 312 1 9307 215 67 28 chr10 40551267 40552761 -105036527 - L1MA4A LINE L1 -1840 5165 3391 2126 119 3 0 chr10 40552761 40553056 -105036232 - AluY SINE Alu -15 296 1 9307 215 67 28 chr10 40553056 40553878 -105035410 - L1MA4A LINE L1 -3614 3391 2602 2706 236 45 7 chr10 40553888 40554797 -105034491 - L1M4 LINE L1 -3226 3622 2677 271 371 45 0 chr10 40555163 40555295 -105033993 - MIR SINE MIR -20 242 105 559 284 65 12 chr10 40556426 40556595 -105032693 + MIR SINE MIR 30 207 -55 186 298 40 89 chr10 40557192 40557385 -105031903 + MIR SINE MIR 17 199 -63 203 316 0 0 chr10 40557494 40557573 -105031715 + (CCTA)n Simple_repeat Simple_repeat 4 82 0 345 340 57 21 chr10 40558616 40558810 -105030478 - MIR SINE MIR -1 261 61 521 227 58 67 chr10 40559013 40559160 -105030128 - MER112 DNA MER1_type -33 227 81 584 203 45 40 chr10 40559160 40559337 -105029951 - MER104 DNA MER2_type 0 180 3 521 227 58 67 chr10 40559337 40559414 -105029874 - MER112 DNA MER1_type -179 81 5 295 247 14 14 chr10 40559941 40560014 -105029274 - L2 LINE L2 0 3313 3241 212 338 0 0 chr10 40560562 40560633 -105028655 - MIR SINE MIR -75 187 117 446 273 23 8 chr10 40560901 40561029 -105028259 + MIR3 SINE MIR 13 142 -66 186 43 0 0 chr10 40561115 40561138 -105028150 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 2052 82 52 28 chr10 40561853 40562144 -105027144 + AluSx SINE Alu 1 298 -14 206 75 0 50 chr10 40562914 40562954 -105026334 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 2889 223 47 17 chr10 40563437 40564329 -105024959 - L1M4 LINE L1 -4160 2689 1771 532 186 16 8 chr10 40564330 40564459 -105024829 + L1MA10 LINE L1 6187 6316 -18 1538 273 54 39 chr10 40564466 40564619 -105024669 + MLT1H1 LTR MaLR 12 161 -394 2338 91 0 26 chr10 40564619 40564927 -105024361 + AluY SINE Alu 1 300 -11 1538 273 54 39 chr10 40564927 40565307 -105023981 + MLT1H1 LTR MaLR 161 553 -2 254 244 67 22 chr10 40565309 40565399 -105023889 + MLT1H1-int LTR MaLR 1 94 -1277 2922 307 29 23 chr10 40565509 40566621 -105022667 - L1M4 LINE L1 -5056 1793 676 1222 330 16 2 chr10 40566933 40567382 -105021906 - L1M4 LINE L1 -6385 464 10 775 280 102 34 chr10 40567390 40567868 -105021420 - L1M4 LINE L1 -1834 4312 3802 26 74 0 0 chr10 40568872 40568926 -105020362 + AT_rich Low_complexity Low_complexity 1 54 0 21 36 0 0 chr10 40569145 40569173 -105020115 + AT_rich Low_complexity Low_complexity 1 28 0 1051 185 10 125 chr10 40569255 40569547 -105019741 - L1MC/D LINE L1 -743 5403 5344 2126 78 0 47 chr10 40569547 40569868 -105019420 - AluY SINE Alu -1 310 5 1051 185 10 125 chr10 40569868 40570096 -105019192 - L1MC/D LINE L1 -802 5344 5091 1623 176 10 43 chr10 40570887 40571188 -105018100 - AluJo SINE Alu -21 291 1 188 273 80 57 chr10 40571594 40571682 -105017606 + L2 LINE L2 3224 3313 0 312 102 0 0 chr10 40574258 40574307 -105014981 + (TAGA)n Simple_repeat Simple_repeat 2 50 0 1516 176 40 29 chr10 40574332 40574605 -105014683 - AluJb SINE Alu -36 276 1 894 234 46 0 chr10 40574739 40574936 -105014352 + MIR SINE MIR 3 208 -54 189 0 0 0 chr10 40575773 40575794 -105013494 + (GGGA)n Simple_repeat Simple_repeat 4 24 0 535 197 16 33 chr10 40576116 40576238 -105013050 + MER45A DNA AcHobo 54 173 -5 21 0 0 0 chr10 40577192 40577213 -105012075 + AT_rich Low_complexity Low_complexity 1 21 0 215 214 24 0 chr10 40577344 40577386 -105011902 + CT-rich Low_complexity Low_complexity 5 47 0 1997 108 7 44 chr10 40577451 40577778 -105011510 - AluSx SINE Alu 0 316 1 711 224 29 35 chr10 40578173 40578347 -105010941 + MER5B DNA MER1_type 1 173 -5 367 309 22 29 chr10 40578362 40578498 -105010790 - MER5A DNA MER1_type 0 189 55 353 386 39 30 chr10 40578781 40579144 -105010144 - L2 LINE L2 -1907 1407 1042 2843 138 9 0 chr10 40579516 40579959 -105009329 - L1PA16 LINE L1 -9 6157 5711 47 44 0 0 chr10 40580533 40580601 -105008687 + AT_rich Low_complexity Low_complexity 1 68 0 2146 91 3 56 chr10 40580629 40580948 -105008340 + AluSq SINE Alu 9 310 -3 206 333 123 18 chr10 40581191 40581305 -105007983 + L2 LINE L2 3142 3267 -5 500 107 39 10 chr10 40582723 40582826 -105006462 + CT-rich Low_complexity Low_complexity 3 108 0 1095 93 0 27 chr10 40582826 40583009 -105006279 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 217 313 102 39 chr10 40583211 40583339 -105005949 - L2 LINE L2 -18 3295 3160 2055 117 10 10 chr10 40585180 40585479 -105003809 - AluSg SINE Alu -11 299 1 566 259 12 57 chr10 40585786 40586033 -105003255 + MER106A DNA MER1_type 1 236 0 8216 163 102 70 chr10 40587195 40587947 -105001341 + L1MC1 LINE L1 7 733 -5693 10771 64 7 0 chr10 40587947 40590117 -104999171 + L1PA6 LINE L1 3961 6143 -11 8216 163 102 70 chr10 40590117 40590155 -104999133 + L1MC1 LINE L1 733 768 -5658 1525 206 0 24 chr10 40590155 40590442 -104998846 - AluJo SINE Alu -32 280 1 8216 163 102 70 chr10 40590442 40591991 -104997297 + L1MC1 LINE L1 768 2422 -4004 1039 208 34 47 chr10 40591987 40592367 -104996921 + L1MC1 LINE L1 3123 3497 -2929 * 5137 202 51 20 chr10 40592371 40593412 -104995876 + L1MC1 LINE L1 3917 4923 -1690 6576 117 26 18 chr10 40593412 40594474 -104994814 - MER11C LTR ERVK 0 1071 1 5137 202 51 20 chr10 40594474 40596031 -104993257 + L1MC1 LINE L1 4923 6606 -7 1507 194 51 3 chr10 40596034 40596327 -104992961 + AluJo SINE Alu 1 307 -5 198 118 0 0 chr10 40596350 40596384 -104992904 + (CAGG)n Simple_repeat Simple_repeat 3 36 0 290 221 29 0 chr10 40596438 40596506 -104992782 + L1ME LINE L1 5661 5730 -436 181 106 21 43 chr10 40599153 40599200 -104990088 + (TCCC)n Simple_repeat Simple_repeat 4 49 0 236 234 0 0 chr10 40599879 40599943 -104989345 - Charlie1 DNA MER1_type -67 2694 2631 756 279 5 22 chr10 40599956 40600178 -104989110 - Charlie1 DNA MER1_type -2542 219 2 300 333 6 18 chr10 40600371 40600536 -104988752 + CT-rich Low_complexity Low_complexity 1 163 0 2920 162 0 2 chr10 40600870 40601371 -104987917 - L1PA16 LINE L1 -20 6146 5647 327 304 71 48 chr10 40601381 40601944 -104987344 - L1MEc LINE L1 -3161 3054 2479 5428 247 72 35 chr10 40602617 40603141 -104986147 - L1ME1 LINE L1 -5 6161 5658 1108 237 17 4 chr10 40603141 40603377 -104985911 + MER8 DNA MER2_type 1 239 0 5428 247 72 35 chr10 40603377 40606001 -104983287 - L1ME1 LINE L1 -508 5658 2766 561 262 23 70 chr10 40606023 40606240 -104983048 - L1MEc LINE L1 -3716 2499 2330 3113 78 0 0 chr10 40606240 40606649 -104982639 - L1PA8 LINE L1 -2 6170 5762 561 262 23 70 chr10 40606649 40606750 -104982538 - L1MEc LINE L1 -3885 2330 2226 258 295 19 67 chr10 40606755 40606860 -104982428 + MIR SINE MIR 163 262 0 21 36 0 0 chr10 40607110 40607138 -104982150 + AT_rich Low_complexity Low_complexity 1 28 0 2444 71 3 0 chr10 40607643 40607951 -104981337 - AluY SINE Alu -2 309 1 1722 162 0 29 chr10 40609007 40609141 -104980147 + AluJo SINE Alu 1 137 -175 911 95 22 22 chr10 40609141 40609320 -104979968 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 1722 162 0 29 chr10 40609320 40609494 -104979794 + AluJo SINE Alu 137 300 -12 393 157 20 10 chr10 40611099 40611201 -104978087 + (TG)n Simple_repeat Simple_repeat 1 103 0 30 27 0 0 chr10 40613247 40613284 -104976004 + AT_rich Low_complexity Low_complexity 1 37 0 742 217 97 14 chr10 40614053 40614270 -104975018 - MIR SINE MIR -10 252 18 648 248 0 0 chr10 40614916 40615041 -104974247 - FLAM_A SINE Alu -8 125 1 234 243 29 29 chr10 40615127 40615230 -104974058 + A-rich Low_complexity Low_complexity 2 104 0 302 311 132 5 chr10 40615885 40616097 -104973191 + L1MC4a LINE L1 5693 5931 -1877 426 174 0 0 chr10 40616410 40616479 -104972809 - AluJ/FLAM SINE Alu -235 77 9 1533 166 13 67 chr10 40617519 40617832 -104971456 - AluJo SINE Alu -8 304 9 22 35 0 0 chr10 40618129 40618158 -104971130 + AT_rich Low_complexity Low_complexity 1 29 0 1626 166 21 11 chr10 40618158 40618441 -104970847 - AluJo SINE Alu -25 287 2 198 0 0 0 chr10 40619675 40619697 -104969591 + (TA)n Simple_repeat Simple_repeat 2 23 0 684 133 0 50 chr10 40619699 40619819 -104969469 - FLAM_C SINE Alu -24 119 6 453 279 23 58 chr10 40619992 40620164 -104969124 - MIR SINE MIR -56 206 41 237 183 0 100 chr10 40621029 40621089 -104968199 + LTR67 LTR ERVL 439 492 -65 1220 176 107 42 chr10 40621091 40621126 -104968162 - MLT2B1 LTR ERVL -8 512 481 297 0 0 0 chr10 40621126 40621159 -104968129 + (CAA)n Simple_repeat Simple_repeat 3 35 0 1220 176 107 42 chr10 40621159 40621565 -104967723 - MLT2B1 LTR ERVL -39 481 5 816 151 32 0 chr10 40621662 40621788 -104967500 + FLAM_C SINE Alu 1 130 -3 2104 109 0 3 chr10 40622186 40622531 -104966757 - AluY SINE Alu 0 344 1 4787 196 93 65 chr10 40623052 40623681 -104965607 - Charlie1a DNA MER1_type -1308 1453 843 1624 163 10 27 chr10 40623681 40623975 -104965313 + AluJo SINE Alu 1 289 -23 4787 196 93 65 chr10 40623975 40624758 -104964530 - Charlie1a DNA MER1_type -1918 843 1 1725 158 0 0 chr10 40624775 40625022 -104964266 + AluSx SINE Alu 46 292 -20 392 245 126 13 chr10 40625030 40625189 -104964099 - MIR SINE MIR -21 241 65 2548 123 70 29 chr10 40625630 40626045 -104963243 + MSTB1 LTR MaLR 1 432 0 2250 155 11 16 chr10 40626879 40627247 -104962041 + MLT2D LTR ERVL 1 366 -48 360 0 0 0 chr10 40627256 40627296 -104961992 + (TG)n Simple_repeat Simple_repeat 1 40 0 1717 146 58 139 chr10 40627900 40628331 -104960957 + MSTD LTR MaLR 1 396 0 635 241 107 62 chr10 40629606 40630092 -104959196 - L1MC4 LINE L1 -1 8041 7534 981 345 46 52 chr10 40630108 40630795 -104958493 + ERVL LTR ERVL 4407 5089 -675 1116 162 142 111 chr10 40630795 40631147 -104958141 - MLT1A1 LTR MaLR 0 365 3 981 345 46 52 chr10 40631147 40631385 -104957903 + ERVL LTR ERVL 5089 5327 -437 21 0 0 0 chr10 40631460 40631481 -104957807 + AT_rich Low_complexity Low_complexity 1 21 0 723 268 82 18 chr10 40631591 40631942 -104957346 + LTR16C LTR ERVL 79 491 0 365 262 7 0 chr10 40632158 40632249 -104957039 - L1MC/D LINE L1 -560 5610 5534 556 281 31 27 chr10 40632251 40632507 -104956781 - L1MCa LINE L1 -4765 1661 1405 1038 230 22 50 chr10 40632572 40632675 -104956613 - L1MC/D LINE L1 -639 5525 5421 2031 87 40 25 chr10 40632675 40633043 -104956245 - AluY SINE Alu 0 372 1 1038 230 22 50 chr10 40633043 40633434 -104955854 - L1MC/D LINE L1 -743 5421 5049 572 261 46 46 chr10 40633545 40633851 -104955437 - L1MC/D LINE L1 -1388 4758 4453 1551 240 94 27 chr10 40634062 40634431 -104954857 + MLT1C LTR MaLR 1 405 -62 1969 152 0 0 chr10 40634431 40634727 -104954561 - AluY SINE Alu -15 296 1 1551 240 94 27 chr10 40634727 40634795 -104954493 + MLT1C LTR MaLR 405 467 0 822 148 23 0 chr10 40635591 40635719 -104953569 - AluSg/x SINE Alu -22 288 158 1802 163 20 10 chr10 40636259 40636565 -104952723 - AluSx SINE Alu -1 311 3 1642 193 122 21 chr10 40636831 40636977 -104952311 + LOR1b LTR ERV1 1 131 -330 2290 93 0 20 chr10 40636977 40637278 -104952010 + AluSg SINE Alu 1 295 -15 1642 193 122 21 chr10 40637278 40637550 -104951738 + LOR1b LTR ERV1 131 461 0 345 169 133 24 chr10 40637569 40637652 -104951636 + MER63 DNA MER1_type 33 750 -86 280 182 0 0 chr10 40637689 40637733 -104951555 + Alu SINE Alu 2 45 -255 991 139 33 7 chr10 40637733 40637884 -104951404 + AluSg/x SINE Alu 137 291 -21 2254 96 0 7 chr10 40638114 40638405 -104950883 - AluY SINE Alu -22 289 1 1149 137 66 38 chr10 40638406 40638617 -104950671 - AluJo SINE Alu -9 303 87 2160 127 3 0 chr10 40638753 40639044 -104950244 + AluSx SINE Alu 1 292 -20 2186 122 3 0 chr10 40639049 40639353 -104949935 + AluSc SINE Alu 1 305 -4 1853 157 37 3 chr10 40639472 40639772 -104949516 + AluY SINE Alu 1 310 -1 396 290 83 6 chr10 40639816 40639985 -104949303 - MER5A DNA MER1_type -7 182 1 2184 94 21 0 chr10 40640068 40640354 -104948934 + AluSp SINE Alu 4 295 -18 1774 123 0 0 chr10 40640919 40641154 -104948134 - AluSq SINE Alu -78 235 1 2027 116 4 0 chr10 40641158 40641458 -104947830 - AluSp SINE Alu 0 309 9 1514 158 9 94 chr10 40641569 40641716 -104947572 + AluJo SINE Alu 1 159 -153 2430 83 0 3 chr10 40641716 40642018 -104947270 + AluSp SINE Alu 1 301 -12 1514 158 9 94 chr10 40642018 40642097 -104947191 + AluJo SINE Alu 159 193 -119 2373 92 0 0 chr10 40642097 40642400 -104946888 - AluY SINE Alu -8 303 1 1514 158 9 94 chr10 40642400 40642501 -104946787 + AluJo SINE Alu 193 301 -11 310 291 51 0 chr10 40643338 40643417 -104945871 + L2 LINE L2 3231 3313 0 2213 122 0 0 chr10 40643541 40643829 -104945459 - AluSg SINE Alu -22 288 1 2118 144 6 6 chr10 40644127 40644439 -104944849 + AluSx SINE Alu 1 312 0 2239 120 13 3 chr10 40644617 40644925 -104944363 + AluSx SINE Alu 1 311 -1 2258 102 0 23 chr10 40645240 40645545 -104943743 + AluSx SINE Alu 1 298 -14 1976 156 0 0 chr10 40646142 40646430 -104942858 + AluSx SINE Alu 1 288 -24 2054 129 3 3 chr10 40646511 40646814 -104942474 - AluSg SINE Alu -3 307 5 2089 124 3 0 chr10 40647162 40647453 -104941835 + AluSc SINE Alu 1 292 -17 1727 153 3 28 chr10 40647588 40647876 -104941412 - AluJo SINE Alu 0 312 32 1433 195 31 21 chr10 40648283 40648546 -104940742 + AluJo SINE Alu 1 269 -43 2385 89 0 3 chr10 40648546 40648849 -104940439 - AluY SINE Alu -9 302 1 1433 195 31 21 chr10 40648849 40648872 -104940416 + AluJo SINE Alu 269 290 -22 585 281 26 0 chr10 40648881 40649034 -104940254 - MIR SINE MIR 0 262 106 2237 119 0 0 chr10 40649688 40649983 -104939305 - AluSg SINE Alu -13 297 3 1969 129 35 0 chr10 40649986 40650273 -104939015 - AluSx SINE Alu -15 297 1 784 151 7 36 chr10 40650280 40650419 -104938869 - AluJb SINE Alu -176 136 2 211 209 202 78 chr10 40650564 40650693 -104938595 - MIR SINE MIR -116 146 2 2139 109 0 0 chr10 40651140 40651415 -104937873 + AluSg SINE Alu 1 275 -35 2130 131 0 0 chr10 40651978 40652269 -104937019 - AluSc SINE Alu -18 291 1 2027 117 31 0 chr10 40652496 40652787 -104936501 + AluSx SINE Alu 1 300 -12 576 106 0 0 chr10 40652787 40652872 -104936416 + (GGGGA)n Simple_repeat Simple_repeat 1 85 0 194 265 0 0 chr10 40653030 40653079 -104936209 - L2 LINE L2 -3 3269 3221 2366 113 0 0 chr10 40653559 40653868 -104935420 + AluSc SINE Alu 1 309 0 212 133 0 44 chr10 40654054 40654099 -104935189 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 1881 103 77 0 chr10 40654304 40654576 -104934712 + AluSc SINE Alu 1 293 -16 1526 180 36 11 chr10 40654585 40654935 -104934353 + AluSq SINE Alu 1 357 0 322 321 58 70 chr10 40654986 40655225 -104934063 + L1ME4a LINE L1 4747 4982 -1164 2297 89 0 3 chr10 40655225 40655516 -104933772 + AluY SINE Alu 1 290 -21 322 321 58 70 chr10 40655516 40655603 -104933685 + L1ME4a LINE L1 4982 5069 -1077 387 0 0 0 chr10 40655626 40655669 -104933619 + (TTTA)n Simple_repeat Simple_repeat 1 43 0 1773 156 11 0 chr10 40655669 40655945 -104933343 - AluSx SINE Alu -32 280 2 1540 181 53 0 chr10 40656122 40656404 -104932884 + AluJo SINE Alu 1 297 -15 2461 81 7 0 chr10 40656463 40656772 -104932516 + AluY SINE Alu 1 311 0 1096 258 128 42 chr10 40656778 40657256 -104932032 + L1ME4a LINE L1 5315 5878 -243 1413 202 49 91 chr10 40657256 40657480 -104931808 + MSTB1 LTR MaLR 1 198 -234 1480 186 28 17 chr10 40657480 40657771 -104931517 + AluJo SINE Alu 1 294 -18 1413 202 49 91 chr10 40657771 40657996 -104931292 + MSTB1 LTR MaLR 198 431 -1 1096 258 128 42 chr10 40657996 40658162 -104931126 + L1ME4a LINE L1 5878 6028 -93 280 42 0 42 chr10 40658196 40658244 -104931044 + (TCCCC)n Simple_repeat Simple_repeat 1 46 0 820 242 0 0 chr10 40658244 40658409 -104930879 - FRAM SINE Alu -15 161 1 1794 154 6 49 chr10 40658896 40659221 -104930067 + AluSx SINE Alu 1 311 -1 467 258 92 6 chr10 40659442 40659605 -104929683 + MER69A DNA AcHobo 1 177 0 454 219 47 120 chr10 40659682 40659771 -104929517 - Charlie8 DNA MER1_type -163 178 109 2251 128 0 0 chr10 40659771 40660068 -104929220 + AluSx SINE Alu 1 297 -15 454 219 47 120 chr10 40660068 40660170 -104929118 - Charlie8 DNA MER1_type -232 109 1 1979 139 0 20 chr10 40661047 40661349 -104927939 - AluSg SINE Alu -14 296 1 1719 153 33 4 chr10 40661578 40661895 -104927393 - AluSq SINE Alu 0 325 1 1749 197 3 0 chr10 40661927 40662232 -104927056 + AluJo SINE Alu 1 306 -6 259 295 71 18 chr10 40662387 40662499 -104926789 - L2 LINE L2 0 3272 3156 1840 137 6 35 chr10 40662525 40662838 -104926450 + AluSx SINE Alu 1 304 -8 180 0 0 0 chr10 40662902 40662922 -104926366 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1643 123 0 0 chr10 40662945 40663173 -104926115 - AluSc SINE Alu -81 228 1 543 250 112 40 chr10 40663180 40663558 -104925730 - L1MEd LINE L1 -4862 1257 786 2175 142 0 0 chr10 40663748 40664059 -104925229 - AluSx SINE Alu -1 311 1 229 325 75 0 chr10 40664149 40664269 -104925019 - L1MEd LINE L1 -5482 637 509 195 304 156 44 chr10 40664660 40664795 -104924493 + MIR SINE MIR 39 188 -74 218 246 103 119 chr10 40664833 40664891 -104924397 + L2 LINE L2 3167 3224 -89 2076 130 10 0 chr10 40664891 40665184 -104924104 + AluSg SINE Alu 1 296 -14 218 246 103 119 chr10 40665184 40665251 -104924037 + L2 LINE L2 3224 3290 -23 1608 177 18 21 chr10 40665319 40665602 -104923686 + AluJo SINE Alu 1 282 -30 2254 112 0 3 chr10 40665884 40666178 -104923110 - AluSx SINE Alu -19 293 1 225 128 0 0 chr10 40666256 40666295 -104922993 - L1ME LINE L1 -415 5755 5717 1892 163 10 3 chr10 40666815 40667116 -104922172 - AluJb SINE Alu -9 303 1 1366 160 3 134 chr10 40667327 40667415 -104921873 - MER47A DNA MER2_type -1958 365 267 2017 137 3 3 chr10 40667415 40667700 -104921588 - AluSx SINE Alu -27 285 1 1366 160 3 134 chr10 40667700 40667839 -104921449 - MER47A DNA MER2_type -2056 267 111 1978 108 0 7 chr10 40667839 40668108 -104921180 + AluSq SINE Alu 38 304 -9 1366 160 3 134 chr10 40668108 40668189 -104921099 - MER47A DNA MER2_type -2212 111 113 1906 164 13 0 chr10 40668189 40668487 -104920801 - AluJb SINE Alu -2 310 9 1366 160 3 134 chr10 40668487 40668564 -104920724 - MER47A DNA MER2_type -2209 114 29 2286 110 10 0 chr10 40668566 40668875 -104920413 + AluSq SINE Alu 1 312 -1 371 220 0 60 chr10 40668916 40669016 -104920272 - MIR SINE MIR -104 158 65 2048 129 14 7 chr10 40669222 40669517 -104919771 - AluSx SINE Alu -15 297 1 1383 138 0 0 chr10 40670902 40671105 -104918183 - AluSq SINE Alu -47 266 64 484 197 0 116 chr10 40671105 40671252 -104918036 - MLT2B1 LTR ERVL -261 259 130 214 215 143 71 chr10 40671322 40671445 -104917843 + MIR SINE MIR 12 141 -67 2280 119 13 26 chr10 40671455 40671704 -104917584 + L1PA15 LINE L1 5658 5902 -263 2065 131 7 10 chr10 40671704 40672001 -104917287 + AluSx SINE Alu 1 296 -16 2280 119 13 26 chr10 40672001 40672139 -104917149 + L1PA15 LINE L1 5902 6040 -125 857 152 0 51 chr10 40672141 40672279 -104917009 + AluSq/x SINE Alu 6 136 -176 2138 127 0 0 chr10 40672279 40672562 -104916726 + AluSg SINE Alu 1 283 -27 755 169 0 7 chr10 40672582 40672724 -104916564 + L1PA15 LINE L1 6025 6165 0 2142 111 3 20 chr10 40672912 40673210 -104916078 - AluSx SINE Alu -19 293 1 5551 135 30 42 chr10 40674126 40675107 -104914181 + LTR5 LTR ERVK 1 969 0 21 0 0 0 chr10 40675365 40675386 -104913902 + AT_rich Low_complexity Low_complexity 1 21 0 2148 107 3 13 chr10 40675443 40675743 -104913545 - AluSx SINE Alu -15 297 1 2022 109 4 11 chr10 40675891 40676166 -104913122 + AluSg SINE Alu 1 273 -37 6312 172 11 11 chr10 40676172 40677491 -104911797 + MSTA-int LTR MaLR 296 1571 -9 1854 153 128 36 chr10 40677500 40677892 -104911396 + MSTA LTR MaLR 1 428 0 228 319 191 47 chr10 40678175 40678798 -104910490 - L2 LINE L2 -665 2649 1937 21 0 0 0 chr10 40679339 40679360 -104909928 + AT_rich Low_complexity Low_complexity 1 21 0 486 49 0 0 chr10 40679459 40679520 -104909768 + (TA)n Simple_repeat Simple_repeat 1 61 0 530 230 123 8 chr10 40679639 40679900 -104909388 + MER33 DNA MER1_type 17 307 -17 2316 67 0 0 chr10 40680764 40681046 -104908242 - AluY SINE Alu -13 298 17 24 53 0 0 chr10 40681067 40681105 -104908183 + AT_rich Low_complexity Low_complexity 1 38 0 2084 98 7 0 chr10 40682585 40682891 -104906397 + AluSc SINE Alu 1 308 0 239 295 0 0 chr10 40683177 40683255 -104906033 + (CATATA)n Simple_repeat Simple_repeat 6 83 0 327 383 39 0 chr10 40683336 40683516 -104905772 - HAL1 LINE L1 -104 2403 2217 26 0 0 0 chr10 40683535 40683561 -104905727 + AT_rich Low_complexity Low_complexity 1 26 0 285 119 15 30 chr10 40683589 40683656 -104905632 + (TA)n Simple_repeat Simple_repeat 1 66 0 282 297 31 40 chr10 40683946 40684168 -104905120 - HAL1 LINE L1 -722 1785 1566 1226 271 88 16 chr10 40684222 40684653 -104904635 + LTR40b LTR ERVL 1 462 0 2142 119 3 0 chr10 40685135 40685428 -104903860 - AluSx SINE Alu -14 298 5 761 161 0 8 chr10 40685443 40685567 -104903721 - AluSg/x SINE Alu -18 294 172 2076 132 3 0 chr10 40685674 40685969 -104903319 - AluSg SINE Alu -14 296 1 2090 102 10 3 chr10 40686059 40686352 -104902936 - AluY SINE Alu -16 295 1 274 196 0 18 chr10 40686557 40686613 -104902675 - MIR SINE MIR -38 224 170 1846 174 3 3 chr10 40686643 40686941 -104902347 + AluJb SINE Alu 10 307 -5 23 0 0 0 chr10 40687727 40687750 -104901538 + AT_rich Low_complexity Low_complexity 1 23 0 203 0 37 0 chr10 40687817 40687844 -104901444 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 2267 70 0 11 chr10 40687846 40688132 -104901156 - AluY SINE Alu -28 283 1 541 260 103 5 chr10 40688338 40688542 -104900746 + Charlie1 DNA MER1_type 16 239 -2522 238 77 39 58 chr10 40688592 40688644 -104900644 - Charlie1 DNA MER1_type -16 2745 2695 218 163 47 0 chr10 40688681 40688724 -104900564 + (TAGA)n Simple_repeat Simple_repeat 1 45 0 188 216 0 0 chr10 40689273 40689310 -104899978 - MIR SINE MIR -115 147 111 21 0 0 0 chr10 40691010 40691031 -104898257 + AT_rich Low_complexity Low_complexity 1 21 0 2046 148 22 27 chr10 40691148 40691514 -104897774 + THE1B LTR MaLR 1 364 0 10928 117 11 2 chr10 40691514 40693079 -104896209 + THE1B-int LTR MaLR 1 1580 0 1987 135 21 81 chr10 40693081 40693466 -104895822 + THE1B LTR MaLR 3 364 0 22 0 0 0 chr10 40693550 40693572 -104895716 + AT_rich Low_complexity Low_complexity 1 22 0 193 289 44 0 chr10 40693978 40694023 -104895265 + MER5A DNA MER1_type 103 149 -40 1024 342 47 23 chr10 40694116 40694671 -104894617 + L2 LINE L2 2260 2827 -487 2256 93 30 0 chr10 40694735 40695035 -104894253 - AluY SINE Alu -2 309 1 1338 217 24 73 chr10 40695361 40695771 -104893517 + MLT1B LTR MaLR 1 390 0 22 0 0 0 chr10 40696211 40696233 -104893055 + AT_rich Low_complexity Low_complexity 1 22 0 2170 94 14 3 chr10 40696529 40696816 -104892472 + AluY SINE Alu 1 290 -21 23 54 0 0 chr10 40696982 40697019 -104892269 + AT_rich Low_complexity Low_complexity 1 37 0 204 40 0 0 chr10 40697459 40697484 -104891804 + (TCTA)n Simple_repeat Simple_repeat 2 26 0 270 269 0 56 chr10 40698024 40698132 -104891156 + GA-rich Low_complexity Low_complexity 5 106 0 561 280 113 6 chr10 40698161 40698329 -104890959 - MIR SINE MIR -37 225 40 1448 194 17 31 chr10 40698504 40698793 -104890495 + AluJo SINE Alu 1 285 -27 354 330 86 30 chr10 40698884 40699151 -104890137 - HAL1 LINE L1 -961 1546 1265 365 318 88 40 chr10 40699241 40699515 -104889773 + L2 LINE L2 3026 3312 -1 941 205 0 133 chr10 40700881 40701227 -104888061 - MLT1B LTR MaLR 0 390 91 237 227 0 0 chr10 40701267 40701333 -104887955 + (TA)n Simple_repeat Simple_repeat 1 66 0 310 249 110 69 chr10 40701663 40701836 -104887452 - L1MC5 LINE L1 -24 7937 7758 31 26 0 0 chr10 40701870 40701908 -104887380 + AT_rich Low_complexity Low_complexity 1 38 0 762 183 23 0 chr10 40702025 40702156 -104887132 + FRAM SINE Alu 26 159 -17 2217 96 0 0 chr10 40702158 40702461 -104886827 + AluSg SINE Alu 1 303 0 1400 197 37 43 chr10 40702464 40702802 -104886486 + AluJb SINE Alu 1 336 0 25 0 0 0 chr10 40703273 40703298 -104885990 + AT_rich Low_complexity Low_complexity 1 25 0 228 24 122 0 chr10 40705012 40705053 -104884235 + L1HS LINE L1 6110 6155 0 1117 150 26 0 chr10 40705723 40705916 -104883372 - Tigger3(Golem) DNA MER2_type 0 3038 2841 1440 166 7 90 chr10 40705921 40706274 -104883014 + AluJo SINE Alu 6 333 0 3099 113 36 11 chr10 40706274 40706823 -104882465 - Tigger3(Golem) DNA MER2_type -189 2840 2278 372 188 208 0 chr10 40706800 40706901 -104882387 - Tigger3(Golem) DNA MER2_type -2907 122 1 * 288 224 60 0 chr10 40709564 40709631 -104879657 + Charlie2 DNA MER1_type 255 325 -2457 1208 208 72 12 chr10 40709634 40709980 -104879308 + Charlie2 DNA MER1_type 1857 2223 -639 848 204 218 14 chr10 40710376 40710875 -104878413 + Charlie2 DNA MER1_type 2262 2862 0 2164 172 35 16 chr10 40711650 40712074 -104877214 - MSTB1 LTR MaLR 0 432 1 2531 103 3 3 chr10 40712097 40712466 -104876822 + L1PA8 LINE L1 5801 6169 -3 438 238 197 0 chr10 40712529 40712676 -104876612 - MIR SINE MIR 0 262 87 1413 211 96 38 chr10 40712686 40713103 -104876185 - MER39 LTR ERV1 0 707 267 244 276 92 0 chr10 40713183 40713259 -104876029 - MIR SINE MIR -179 83 1 199 313 78 0 chr10 40715543 40715607 -104873681 - L2 LINE L2 -51 3221 3153 934 192 59 0 chr10 40715608 40715811 -104873477 + MER33 DNA MER1_type 1 215 -109 1714 169 11 0 chr10 40715811 40716113 -104873175 - AluJb SINE Alu 0 305 1 199 311 85 47 chr10 40716139 40716245 -104873043 + MIR SINE MIR 104 213 -49 1194 101 6 12 chr10 40717165 40717188 -104872100 - MER107 DNA MER1_type -29 168 146 182 36 0 36 chr10 40717188 40717216 -104872072 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1194 101 6 12 chr10 40717216 40717361 -104871927 - MER107 DNA MER1_type -51 146 1 221 0 35 0 chr10 40718406 40718435 -104870853 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 44006 46 6 1 chr10 40718783 40724905 -104864383 + L1PA4 LINE L1 1 6155 0 964 174 0 0 chr10 40726290 40726472 -104862816 - FRAM SINE Alu 0 179 1 526 216 122 34 chr10 40727276 40727521 -104861767 + MER34 LTR ERV1 229 542 0 332 339 60 55 chr10 40727616 40727762 -104861526 - MIR3 SINE MIR -22 186 37 1903 162 3 0 chr10 40727762 40728059 -104861229 - AluSx SINE Alu -14 298 1 332 339 60 55 chr10 40728059 40728095 -104861193 - MIR3 SINE MIR -171 37 3 1381 161 8 24 chr10 40728122 40728376 -104860912 + AluJo SINE Alu 42 291 -21 30 0 0 0 chr10 40728377 40728407 -104860881 + AT_rich Low_complexity Low_complexity 1 30 0 263 220 154 44 chr10 40728438 40728529 -104860759 - MER91B DNA MER1_type -89 101 1 1676 187 0 0 chr10 40729004 40729293 -104859995 - AluJo SINE Alu -20 292 4 2136 158 40 15 chr10 40730533 40730861 -104858427 - MER1B DNA MER1_type -1 336 1 4237 105 2 2 chr10 40731023 40731577 -104857711 + MER41A LTR ERV1 1 554 0 202 261 166 38 chr10 40731922 40732133 -104857155 - L2 LINE L2 -419 2895 2658 256 220 0 34 chr10 40732402 40732461 -104856827 + MER5A DNA MER1_type 1 57 -132 1543 192 7 13 chr10 40732519 40732821 -104856467 - AluJo SINE Alu -9 303 4 1334 101 6 6 chr10 40732838 40733016 -104856272 + AluSp SINE Alu 1 178 -135 1862 171 0 10 chr10 40733204 40733503 -104855785 + AluJb SINE Alu 1 296 -16 280 61 0 41 chr10 40733656 40733705 -104855583 + (CAT)n Simple_repeat Simple_repeat 1 47 0 189 0 0 0 chr10 40734424 40734445 -104854843 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 295 196 19 0 chr10 40735387 40735449 -104853839 - FLAM SINE Alu -16 117 71 630 149 0 0 chr10 40735457 40735551 -104853737 + AluJ/FRAM SINE Alu 216 309 -3 840 158 23 0 chr10 40736205 40736338 -104852950 + AluJo SINE Alu 1 136 -176 1569 200 7 4 chr10 40737320 40737600 -104851688 - AluJo SINE Alu -31 281 1 708 199 0 30 chr10 40738148 40738279 -104851009 - FLAM_A SINE Alu -9 133 7 276 322 43 48 chr10 40738474 40738704 -104850584 - L2 LINE L2 -450 2864 2636 2122 114 0 7 chr10 40738765 40739054 -104850234 + AluY SINE Alu 6 292 -19 1045 166 0 18 chr10 40739062 40739225 -104850063 + AluJb SINE Alu 135 294 -18 243 257 0 0 chr10 40739637 40739711 -104849577 + (TATATG)n Simple_repeat Simple_repeat 2 75 0 28 29 0 0 chr10 40739742 40739777 -104849511 + AT_rich Low_complexity Low_complexity 1 35 0 664 236 0 0 chr10 40739825 40739952 -104849336 - FLAM_A SINE Alu -6 127 1 437 240 5 88 chr10 40740036 40740115 -104849173 - L1ME LINE L1 -359 5762 5678 2155 151 10 68 chr10 40740115 40740527 -104848761 - MLT1B LTR MaLR -2 388 1 437 240 5 88 chr10 40740527 40740651 -104848637 - L1ME LINE L1 -443 5678 5576 2698 89 43 3 chr10 40740680 40741030 -104848258 - THE1B LTR MaLR 0 364 1 330 256 58 73 chr10 40741073 40741264 -104848024 - MLT1J LTR MaLR -10 501 314 791 231 187 11 chr10 40741275 40741543 -104847745 + L2 LINE L2 2932 3246 -67 354 304 0 0 chr10 40741546 40741638 -104847650 + (CA)n Simple_repeat Simple_repeat 1 92 0 379 224 19 25 chr10 40741689 40741850 -104847438 + CT-rich Low_complexity Low_complexity 4 163 0 307 274 83 0 chr10 40741857 40741941 -104847347 - MIR SINE MIR -99 109 19 810 142 8 8 chr10 40742349 40742476 -104846812 - AluJb SINE Alu -185 127 1 987 298 119 11 chr10 40742736 40743173 -104846115 + L2 LINE L2 2804 3287 -26 601 153 41 20 chr10 40743175 40743273 -104846015 - AluJo SINE Alu -25 287 188 * 812 138 17 0 chr10 40743271 40743387 -104845901 - AluJo SINE Alu -192 120 3 24 32 0 0 chr10 40743391 40743422 -104845866 + AT_rich Low_complexity Low_complexity 1 31 0 273 231 204 9 chr10 40743482 40743590 -104845698 + MER117 DNA MER1_type 4 132 -65 888 155 0 14 chr10 40744008 40744150 -104845138 - AluJb SINE Alu -16 296 157 2039 120 0 17 chr10 40745403 40745734 -104843554 + AluSc SINE Alu 1 309 0 1819 176 0 19 chr10 40746084 40746391 -104842897 + AluJo SINE Alu 1 301 -11 273 196 0 0 chr10 40746560 40746616 -104842672 + (TA)n Simple_repeat Simple_repeat 2 57 0 214 172 35 0 chr10 40746665 40746707 -104842581 + (TA)n Simple_repeat Simple_repeat 1 47 -13 5361 146 75 44 chr10 40746707 40747744 -104841544 + MER11C LTR ERVK 3 1071 0 214 172 35 0 chr10 40747744 40747759 -104841529 + (TA)n Simple_repeat Simple_repeat 47 60 0 361 113 0 0 chr10 40747895 40747957 -104841331 - L1MA7 LINE L1 -1 6290 6229 5831 261 45 28 chr10 40747957 40750464 -104838824 - L1 LINE L1 -2498 3536 1334 1226 238 74 15 chr10 40750464 40750788 -104838500 - MER2 DNA MER2_type 0 344 2 5831 261 45 28 chr10 40750788 40751840 -104837448 - L1 LINE L1 -4700 1334 302 247 307 147 43 chr10 40751951 40752277 -104837011 - L1M3a LINE L1 -5251 704 345 1172 334 7 10 chr10 40752318 40752731 -104836557 - L1M3a LINE L1 -5532 423 12 22 56 0 0 chr10 40752757 40752793 -104836495 + AT_rich Low_complexity Low_complexity 1 36 0 2111 191 30 7 chr10 40754171 40754606 -104834682 - L1MA6 LINE L1 0 6300 5856 2574 223 77 47 chr10 40754685 40755349 -104833939 + MLT1A1-int LTR MaLR 1052 1735 0 1301 231 126 3 chr10 40755349 40755674 -104833614 + MLT1A1 LTR MaLR 1 365 0 2381 78 0 7 chr10 40756203 40756511 -104832777 + AluY SINE Alu 1 306 -5 24 0 0 0 chr10 40756803 40756827 -104832461 + AT_rich Low_complexity Low_complexity 1 24 0 1456 251 35 43 chr10 40757878 40758371 -104830917 + L1ME1 LINE L1 5676 6164 -2 403 272 82 13 chr10 40758896 40759054 -104830234 - MIR SINE MIR -63 199 31 2275 84 13 10 chr10 40759130 40759429 -104829859 + AluY SINE Alu 1 300 -11 226 53 79 26 chr10 40760295 40760371 -104828917 + (TA)n Simple_repeat Simple_repeat 1 80 0 2268 88 0 41 chr10 40760418 40760736 -104828552 + AluY SINE Alu 1 305 -6 1731 102 50 79 chr10 40761226 40761529 -104827759 + AluSq SINE Alu 1 294 -19 35 0 0 0 chr10 40761540 40761575 -104827713 + AT_rich Low_complexity Low_complexity 1 35 0 394 296 96 0 chr10 40762306 40762441 -104826847 - MIR SINE MIR -66 196 49 219 208 21 0 chr10 40762810 40762858 -104826430 + L2 LINE L2 3223 3271 -1 22 0 0 0 chr10 40763335 40763357 -104825931 + AT_rich Low_complexity Low_complexity 1 22 0 462 227 127 0 chr10 40764339 40764449 -104824839 + FLAM_A SINE Alu 1 124 -9 229 368 59 34 chr10 40764464 40764510 -104824778 - L2 LINE L2 -584 2730 2687 2455 71 0 3 chr10 40764510 40764806 -104824482 + AluY SINE Alu 1 295 -16 229 368 59 34 chr10 40764806 40764963 -104824325 - L2 LINE L2 -627 2687 2522 3690 204 28 22 chr10 40764969 40765781 -104823507 + L1MB8 LINE L1 4966 5793 -385 2268 107 7 0 chr10 40765781 40766080 -104823208 - AluSq SINE Alu -12 301 1 3690 204 28 22 chr10 40766080 40766464 -104822824 + L1MB8 LINE L1 5793 6173 -5 200 254 254 36 chr10 40766679 40766844 -104822444 - L2 LINE L2 -1038 2276 2076 1875 132 10 52 chr10 40767068 40767211 -104822077 + AluSq SINE Alu 1 148 -165 2187 78 46 4 chr10 40767211 40767492 -104821796 + AluSc SINE Alu 1 293 -16 1875 132 10 52 chr10 40767492 40767658 -104821630 + AluSq SINE Alu 148 297 -16 1633 176 10 3 chr10 40768829 40769118 -104820170 - AluJo SINE Alu -21 291 1 2116 141 0 3 chr10 40769663 40769969 -104819319 + AluSq SINE Alu 1 305 -8 25 31 0 0 chr10 40770225 40770257 -104819031 + AT_rich Low_complexity Low_complexity 1 32 0 425 93 0 0 chr10 40770968 40771022 -104818266 + Alu SINE Alu 229 282 -27 2167 123 7 0 chr10 40771375 40771692 -104817596 - AluSx SINE Alu 0 312 1 25 0 0 0 chr10 40772584 40772609 -104816679 + AT_rich Low_complexity Low_complexity 1 25 0 927 273 95 48 chr10 40772746 40773262 -104816026 + MLT1F LTR MaLR 1 540 -2 21 36 0 0 chr10 40773527 40773555 -104815733 + AT_rich Low_complexity Low_complexity 1 28 0 308 235 12 71 chr10 40773856 40773941 -104815347 + Tigger3(Golem) DNA MER2_type 2 81 -2948 298 109 0 0 chr10 40773953 40773999 -104815289 - AluSx SINE Alu -2 298 253 1268 108 48 0 chr10 40773999 40774166 -104815122 - AluSx SINE Alu -137 175 1 1604 126 45 4 chr10 40774170 40774439 -104814849 + Tigger3(Golem) DNA MER2_type 2749 3028 -1 306 0 0 0 chr10 40775352 40775386 -104813902 + (TG)n Simple_repeat Simple_repeat 2 35 0 387 216 0 11 chr10 40775574 40775662 -104813626 - L1MCa LINE L1 -5762 664 578 2494 250 11 3 chr10 40775748 40776316 -104812972 - L1MCa LINE L1 -5816 610 39 1891 202 0 48 chr10 40776443 40776859 -104812429 + MSTD LTR MaLR 1 396 0 882 355 28 0 chr10 40776930 40777395 -104811893 - HERV16 LTR ERVL -3604 1392 915 320 362 122 24 chr10 40777531 40778070 -104811218 - HERV16 LTR ERVL -4337 659 68 400 324 96 42 chr10 40778149 40778554 -104810734 + LTR16A1 LTR ERVL 1 427 -30 270 337 126 26 chr10 40778561 40778950 -104810338 - LTR16A1 LTR ERVL -29 428 1 1512 211 62 130 chr10 40779076 40779943 -104809345 - L1PA15-16 LINE L1 -2895 3954 3147 6105 124 6 6 chr10 40779966 40780977 -104808311 - L1MA2 LINE L1 0 6304 5294 1022 196 10 0 chr10 40780975 40781179 -104808109 - L1MA2 LINE L1 -1977 4169 3964 * 1631 196 5 0 chr10 40781182 40781570 -104807718 - L1PA15-16 LINE L1 -3703 3146 2757 356 202 67 19 chr10 40783788 40783892 -104805396 - L1PA15-16 LINE L1 -4070 2779 2671 2796 127 42 8 chr10 40783895 40784375 -104804913 + L1PA15 LINE L1 5669 6164 -1 1918 134 36 55 chr10 40784500 40784865 -104804423 + MLT2D LTR ERVL 1 358 -56 201 74 0 0 chr10 40784882 40784909 -104804379 + (TAGG)n Simple_repeat Simple_repeat 1 27 0 198 118 0 0 chr10 40784910 40784944 -104804344 + (CA)n Simple_repeat Simple_repeat 2 35 0 219 267 0 0 chr10 40784945 40784990 -104804298 + (TATATG)n Simple_repeat Simple_repeat 4 48 0 313 48 0 0 chr10 40785172 40785214 -104804074 - U3 snRNA snRNA -175 42 1 637 279 44 3 chr10 40785371 40785669 -104803619 + L1ME3A LINE L1 2268 2577 -3569 814 319 68 19 chr10 40785684 40786255 -104803033 + L1ME3A LINE L1 5523 6121 -49 17033 34 1 0 chr10 40786487 40789322 -104799966 + L1PA3 LINE L1 3317 6152 -3 192 77 0 0 chr10 40789567 40789593 -104799695 + (A)n Simple_repeat Simple_repeat 1 26 0 244 234 36 18 chr10 40789593 40789704 -104799584 + MER20B DNA MER1_type 663 775 -8 278 247 11 0 chr10 40789923 40790016 -104799272 + (GAATG)n Simple_repeat Simple_repeat 2 95 0 962 190 61 4 chr10 40790320 40790624 -104798664 + MLT1A1 LTR MaLR 8 365 0 22 0 0 0 chr10 40791247 40791269 -104798019 + AT_rich Low_complexity Low_complexity 1 22 0 1878 248 113 20 chr10 40791997 40792245 -104797043 - L1ME2 LINE L1 -10 6088 5865 2351 88 3 3 chr10 40792245 40792542 -104796746 - AluSx SINE Alu -7 305 9 1878 248 113 20 chr10 40792542 40793230 -104796058 - L1ME2 LINE L1 -233 5865 5066 351 0 0 0 chr10 40793654 40793693 -104795595 + (TG)n Simple_repeat Simple_repeat 2 40 0 2063 258 55 46 chr10 40793693 40794570 -104794718 - L1ME2 LINE L1 -3234 2846 1978 360 0 0 0 chr10 40794570 40794610 -104794678 + (TG)n Simple_repeat Simple_repeat 2 41 0 2063 258 55 46 chr10 40794610 40794869 -104794419 - L1ME2 LINE L1 -4102 1978 1723 2081 128 13 3 chr10 40794869 40795167 -104794121 - AluSg1 SINE Alu -8 301 1 2063 258 55 46 chr10 40795167 40795591 -104793697 - L1ME2 LINE L1 -4357 1723 1304 1780 179 10 0 chr10 40795591 40795717 -104793571 + AluSx SINE Alu 1 124 -188 270 116 0 0 chr10 40795717 40795760 -104793528 + (CA)n Simple_repeat Simple_repeat 2 44 0 1780 179 10 0 chr10 40795760 40795923 -104793365 + AluSx SINE Alu 124 293 -19 2063 258 55 46 chr10 40795923 40796468 -104792820 - L1ME2 LINE L1 -4776 1304 700 296 370 62 9 chr10 40797089 40797313 -104791975 - MIR SINE MIR -20 242 7 800 260 42 75 chr10 40798388 40798902 -104790386 - MLT1H LTR MaLR 0 549 11 1612 173 14 24 chr10 40798960 40799255 -104790033 - AluJo SINE Alu -20 292 1 2499 82 0 0 chr10 40799402 40799707 -104789581 - AluY SINE Alu -2 309 5 236 211 0 58 chr10 40799815 40799867 -104789421 - L2 LINE L2 -2 3270 3222 193 316 0 0 chr10 40800326 40800383 -104788905 - MER5B DNA MER1_type -105 73 17 324 365 74 34 chr10 40800405 40800959 -104788329 - L2 LINE L2 -552 2762 2187 287 378 16 8 chr10 40800983 40801110 -104788178 - MER5A DNA MER1_type -3 186 59 1659 209 35 8 chr10 40801231 40801605 -104787683 + MLT1B LTR MaLR 1 384 -6 273 280 21 27 chr10 40802023 40802133 -104787155 + GA-rich Low_complexity Low_complexity 1 109 0 226 216 0 0 chr10 40804682 40804733 -104784555 - L1M4 LINE L1 -3311 2835 2785 1747 45 0 0 chr10 40804755 40804956 -104784332 - AluY SINE Alu -15 296 96 648 49 0 0 chr10 40805712 40805794 -104783494 + AluY SINE Alu 1 82 -229 2226 124 0 3 chr10 40806237 40806543 -104782745 + AluSq SINE Alu 5 309 -4 42 41 0 52 chr10 40806963 40807060 -104782228 + AT_rich Low_complexity Low_complexity 1 92 0 21 36 0 0 chr10 40807224 40807252 -104782036 + AT_rich Low_complexity Low_complexity 1 28 0 549 143 0 0 chr10 40807582 40807659 -104781629 - AluJ/FLAM SINE Alu -230 82 6 674 268 57 24 chr10 40807801 40808047 -104781241 + L2 LINE L2 3050 3303 -10 5373 86 18 0 chr10 40808047 40808807 -104780481 + L1PA11 LINE L1 5400 6173 -1 22 0 0 0 chr10 40808858 40808880 -104780408 + AT_rich Low_complexity Low_complexity 1 22 0 24744 40 3 3 chr10 40808921 40812763 -104776525 - L1PA4 LINE L1 0 6155 2310 706 264 11 22 chr10 40812943 40813121 -104776167 - MER45A DNA AcHobo -2 176 1 348 257 140 7 chr10 40813168 40813304 -104775984 + L2 LINE L2 3114 3267 -5 2222 114 0 0 chr10 40814511 40814792 -104774496 - AluSx SINE Alu -15 297 17 1836 203 36 31 chr10 40815099 40815548 -104773740 + pTR5 LTR ERV1 743 1193 -1245 306 368 59 18 chr10 40816420 40816692 -104772596 + HAL1 LINE L1 1105 1387 -1120 1848 153 29 132 chr10 40816936 40817420 -104771868 - Tigger2a DNA MER2_type 0 434 1 2804 188 28 33 chr10 40817788 40818393 -104770895 - LTR26 LTR ERV1 0 603 2 249 108 0 0 chr10 40818435 40818472 -104770816 + (TG)n Simple_repeat Simple_repeat 2 38 0 344 291 136 20 chr10 40818803 40818868 -104770420 + L1M4 LINE L1 2679 2735 -3411 2579 50 3 3 chr10 40818868 40819166 -104770122 + AluY SINE Alu 1 298 -13 344 291 136 20 chr10 40819166 40819402 -104769886 + L1M4 LINE L1 2735 3015 -3131 668 168 8 0 chr10 40820574 40820699 -104768589 + L1MA7 LINE L1 6166 6291 0 418 291 81 45 chr10 40821400 40821758 -104767530 - L1MDa LINE L1 -2602 3938 3568 6695 83 23 19 chr10 40821760 40821850 -104767438 - L1MA3 LINE L1 0 6305 6217 2087 128 7 7 chr10 40821850 40822147 -104767141 + AluSg SINE Alu 1 297 -13 6695 83 23 19 chr10 40822147 40823027 -104766261 - L1MA3 LINE L1 -88 6217 5331 * 10848 162 12 7 chr10 40823024 40824760 -104764528 - L1M1 LINE L1 -5807 1758 14 1533 266 46 14 chr10 40824995 40825514 -104763774 - L1ME3A LINE L1 -260 5910 5375 2409 124 40 26 chr10 40825525 40825903 -104763385 + MSTC LTR MaLR 1 383 -45 841 171 42 10 chr10 40825921 40826114 -104763174 - L1MDa LINE L1 -3530 3010 2812 * 2325 193 95 83 chr10 40826111 40826406 -104762882 - L1MDa LINE L1 -4000 2540 2250 2087 119 3 3 chr10 40826406 40826730 -104762558 - AluSx SINE Alu 0 324 1 2325 193 95 83 chr10 40826730 40827267 -104762021 - L1MDa LINE L1 -4290 2250 1697 303 184 0 6 chr10 40827272 40827347 -104761941 + MLT2B1 LTR ERVL 443 520 0 1322 257 169 35 chr10 40827353 40827976 -104761312 + L1MC4a LINE L1 6784 7489 -319 404 256 133 15 chr10 40827979 40828174 -104761114 + L1MC4 LINE L1 7759 7976 -66 763 265 51 8 chr10 40828318 40828552 -104760736 + MIR SINE MIR 18 261 -1 2683 73 35 0 chr10 40828900 40829243 -104760045 + THE1A LTR MaLR 1 355 0 472 255 145 30 chr10 40829703 40830058 -104759230 - MLT1H LTR MaLR -2 547 125 270 342 29 23 chr10 40830412 40830719 -104758569 + L1ME3A LINE L1 4978 5286 -860 666 284 41 5 chr10 40830729 40830923 -104758365 + MER63A DNA MER1_type 4 204 -6 1022 288 92 42 chr10 40830924 40830987 -104758301 + L1ME3A LINE L1 5285 5343 -827 2182 141 79 12 chr10 40830987 40831392 -104757896 - MSTB1 LTR MaLR 0 432 1 1022 288 92 42 chr10 40831392 40831995 -104757293 + L1ME3A LINE L1 5343 5984 -186 444 19 0 0 chr10 40832596 40832649 -104756639 + (CA)n Simple_repeat Simple_repeat 2 54 0 1097 183 18 14 chr10 40833337 40833556 -104755732 - AluJb SINE Alu -8 304 85 1009 282 120 30 chr10 40833576 40834108 -104755180 + L1MC4a LINE L1 5316 5895 -1913 862 221 89 70 chr10 40834515 40834931 -104754357 + MLT1H1 LTR MaLR 96 368 -6 1014 141 82 5 chr10 40835280 40835464 -104753824 + L1PB1 LINE L1 3 200 -6663 3274 113 58 16 chr10 40835464 40835968 -104753320 + L1PB1 LINE L1 634 1158 -5705 992 94 0 8 chr10 40835983 40836110 -104753178 - AluSp/q SINE Alu -20 293 168 2554 92 129 1 chr10 40836111 40836559 -104752729 + L1PB1 LINE L1 2521 3025 -3837 550 97 0 0 chr10 40836560 40836632 -104752656 - L1PBa LINE L1 -4385 2478 2407 4624 60 15 32 chr10 40836633 40837682 -104751606 - MER11A LTR ERVK 0 1266 1 1820 87 64 0 chr10 40837682 40837948 -104751340 - L1PBa LINE L1 -4453 2410 2128 * 13612 172 9 29 chr10 40837947 40841808 -104747480 + L1PB1 LINE L1 3032 6823 -44 656 243 53 21 chr10 40842307 40842496 -104746792 + MER58A DNA MER1_type 18 212 -12 2060 144 0 0 chr10 40842655 40842946 -104746342 + AluSx SINE Alu 1 291 -21 230 219 36 95 chr10 40842948 40843085 -104746203 + L1ME4a LINE L1 5255 5383 -2425 308 319 76 29 chr10 40843157 40843539 -104745749 + L1ME4a LINE L1 5492 5891 -230 216 171 0 0 chr10 40843584 40843619 -104745669 + (TG)n Simple_repeat Simple_repeat 2 36 0 685 276 134 30 chr10 40843682 40844143 -104745145 - MLT1J LTR MaLR 0 511 3 832 156 16 0 chr10 40844398 40844526 -104744762 + AluJb SINE Alu 3 132 -180 1145 233 66 3 chr10 40844792 40845079 -104744209 + L1MDb LINE L1 18 322 -6087 1791 188 53 53 chr10 40845079 40845584 -104743704 - MLT1D LTR MaLR 0 505 1 1182 226 22 194 chr10 40845586 40846356 -104742932 - MLT1D-int LTR MaLR -2 1369 732 * 3327 187 81 45 chr10 40846354 40847200 -104742088 + L1MDb LINE L1 324 1295 -5111 2102 86 54 4 chr10 40847200 40847479 -104741809 + AluY SINE Alu 2 294 -17 3327 187 81 45 chr10 40847479 40847886 -104741402 + L1MDb LINE L1 1295 1686 -4720 1595 206 34 6 chr10 40847973 40848370 -104740918 - MLT2B1 LTR ERVL -59 456 3 521 222 169 29 chr10 40848373 40848580 -104740708 - L1MC4a LINE L1 -1027 6781 6546 1487 199 14 7 chr10 40848580 40848867 -104740421 + LOR1b LTR ERV1 65 353 -108 458 81 189 0 chr10 40848855 40848929 -104740359 + LOR1a LTR ERV1 410 497 0 * 429 294 107 56 chr10 40849056 40849913 -104739375 - L1MEc LINE L1 -2416 3799 2862 2289 96 3 0 chr10 40849913 40850204 -104739084 + AluSc SINE Alu 1 292 -17 429 294 107 56 chr10 40850204 40850547 -104738741 - L1MEc LINE L1 -3353 2862 2538 237 226 16 0 chr10 40850655 40850717 -104738571 + HsTC2 DNA Tc2 2 64 -1834 334 222 100 11 chr10 40850719 40850809 -104738479 + L1MB1 LINE L1 6008 6105 -63 359 191 0 0 chr10 40850809 40850872 -104738416 + AluJ/FRAM SINE Alu 226 288 -14 321 178 27 0 chr10 40850889 40850962 -104738326 + L1MB1 LINE L1 6093 6167 -1 847 221 29 5 chr10 40851000 40851204 -104738084 + HsTC2 DNA Tc2 93 301 -1597 * 2683 218 93 30 chr10 40851198 40851618 -104737670 + HsTC2 DNA Tc2 146 538 -1362 2387 107 0 0 chr10 40851618 40851927 -104737361 + AluSx SINE Alu 1 309 -3 2683 218 93 30 chr10 40851927 40852374 -104736914 + HsTC2 DNA Tc2 538 1653 -247 1910 147 0 7 chr10 40852421 40852700 -104736588 - AluSx SINE Alu -15 297 21 356 256 41 20 chr10 40852705 40852900 -104736388 - L1MEc LINE L1 -3866 2349 2180 588 302 98 23 chr10 40853357 40853870 -104735418 - HAL1 LINE L1 -849 1658 1108 869 262 172 11 chr10 40853915 40854281 -104735007 - L1MC4a LINE L1 -2056 5752 5328 764 284 53 82 chr10 40854509 40854975 -104734313 - L1MC4a LINE L1 -807 5339 4914 2314 89 3 3 chr10 40854975 40855279 -104734009 + AluY SINE Alu 3 306 -5 764 284 53 82 chr10 40855279 40855774 -104733514 - L1MC4a LINE L1 -1232 4914 4406 1733 179 0 26 chr10 40855803 40856111 -104733177 - AluJo SINE Alu -10 302 3 3719 180 41 25 chr10 40856182 40856986 -104732302 - L1MB7 LINE L1 -85 6099 5283 674 354 80 31 chr10 40857182 40857774 -104731514 - L1MC4a LINE L1 -2024 4122 3483 2025 171 118 12 chr10 40857774 40858196 -104731092 - MLT1C LTR MaLR 0 467 1 674 354 80 31 chr10 40858196 40858365 -104730923 - L1MC4a LINE L1 -2663 3483 3324 584 249 43 80 chr10 40858645 40858970 -104730318 - L1ME1 LINE L1 -16 6150 5838 232 239 99 76 chr10 40864293 40864437 -104724851 - MIR SINE MIR -63 145 38 262 320 55 32 chr10 40864555 40864774 -104724514 + L1M4 LINE L1 4943 5166 -980 227 264 0 0 chr10 40865337 40865390 -104723898 + (TG)n Simple_repeat Simple_repeat 2 54 0 3774 116 11 20 chr10 40865966 40866519 -104722769 + LTR14 LTR ERVK 1 548 0 382 239 255 8 chr10 40868163 40868414 -104720874 - L2 LINE L2 -176 3137 2825 994 257 44 42 chr10 40868732 40869133 -104720155 + L1MD1 LINE L1 338 1047 -5493 * 9597 210 51 54 chr10 40869128 40872192 -104717096 + L1MD1 LINE L1 1345 4418 -2218 697 176 7 0 chr10 40872192 40872334 -104716954 + L1MB4 LINE L1 6037 6179 -1 9597 210 51 54 chr10 40872334 40873605 -104715683 + L1MD1 LINE L1 4418 5642 -994 1746 137 0 4 chr10 40873605 40873875 -104715413 + AluSg SINE Alu 35 303 -7 9597 210 51 54 chr10 40873875 40874235 -104715053 + L1MD1 LINE L1 5642 6002 -634 * 36977 64 4 3 chr10 40874234 40879779 -104709509 + L1PA5 LINE L1 603 6152 -2 1599 164 40 16 chr10 40879904 40880208 -104709080 + AluSx SINE Alu 1 311 -1 3119 144 13 105 chr10 40880209 40880912 -104708376 + L1MD1 LINE L1 5999 6636 0 766 292 51 48 chr10 40881018 40881412 -104707876 - HAL1 LINE L1 -7 2500 2106 394 315 142 23 chr10 40881433 40881827 -104707461 - L2 LINE L2 -1 3312 2872 1351 208 64 9 chr10 40883332 40883678 -104705610 - MLT1A1 LTR MaLR 0 365 1 201 279 81 0 chr10 40884249 40884360 -104704928 - L2 LINE L2 -825 2489 2370 296 152 0 0 chr10 40886632 40886678 -104702610 - MLT1L LTR MaLR -221 394 349 472 302 63 31 chr10 40887129 40887351 -104701937 - L3 LINE CR1 -38 1539 1311 2452 271 69 31 chr10 40887396 40888567 -104700721 + L1MEc LINE L1 974 2189 -4207 3147 236 138 28 chr10 40888593 40888916 -104700372 + L1M4b LINE L1 17 303 -6556 1596 249 64 19 chr10 40888916 40889397 -104699891 + MLT1D LTR MaLR 3 505 0 3147 236 138 28 chr10 40889397 40889995 -104699293 + L1M4b LINE L1 303 1039 -5820 443 279 105 22 chr10 40890029 40890295 -104698993 - L1M4 LINE L1 -1076 5070 4785 497 349 49 29 chr10 40890338 40890952 -104698336 - L1MEd LINE L1 -5483 636 11 1894 133 10 26 chr10 40891284 40891586 -104697702 + AluJb SINE Alu 1 297 -15 4611 212 74 18 chr10 40894418 40896021 -104693267 - L1MD1 LINE L1 0 6242 4538 4764 238 53 6 chr10 40896023 40897420 -104691868 - L1MD1 LINE L1 -1702 4444 2983 243 185 0 15 chr10 40897708 40897773 -104691515 - L1ME4a LINE L1 -9 6112 6049 2397 122 0 21 chr10 40897857 40898233 -104691055 - L1PB1 LINE L1 -2 6149 5782 315 0 0 0 chr10 40898268 40898303 -104690985 + (CA)n Simple_repeat Simple_repeat 2 36 0 3836 117 1 13 chr10 40898309 40898497 -104690791 - L1PB1 LINE L1 -360 5791 5602 4743 166 52 50 chr10 40898497 40899566 -104689722 + MER11C LTR ERVK 1 1071 0 3836 117 1 13 chr10 40899566 40900138 -104689150 - L1PB1 LINE L1 -549 5602 5039 444 245 180 12 chr10 40900150 40900395 -104688893 - L1ME4a LINE L1 -241 5880 5595 38 0 0 0 chr10 40902890 40902928 -104686360 + AT_rich Low_complexity Low_complexity 1 38 0 802 180 267 8 chr10 40902983 40903226 -104686062 - L1MA9 LINE L1 -74 6238 5934 1994 132 0 3 chr10 40903226 40903530 -104685758 + AluSp SINE Alu 1 303 -10 802 180 267 8 chr10 40903530 40903542 -104685746 - L1MA9 LINE L1 -378 5934 5926 8936 204 30 50 chr10 40903556 40903945 -104685343 + L1 LINE L1 2546 2941 -3205 2270 90 3 0 chr10 40903945 40904246 -104685042 + AluSq SINE Alu 1 302 -11 8936 204 30 50 chr10 40904246 40906781 -104682507 + L1 LINE L1 2941 5336 -810 2241 64 3 32 chr10 40907532 40907844 -104681444 - AluY SINE Alu 0 311 9 967 235 66 85 chr10 40908342 40909123 -104680165 + HSREP522 Satellite telomeric 1 765 -267 1997 133 0 3 chr10 40910300 40910594 -104678694 - AluSx SINE Alu -19 293 1 376 317 7 0 chr10 40910614 40910756 -104678532 + CT-rich Low_complexity Low_complexity 2 144 0 1314 176 86 8 chr10 40911985 40912241 -104677047 + LOR1-int LTR ERV1 2079 2354 -3592 829 185 36 5 chr10 40912240 40912435 -104676853 + LOR1-int LTR ERV1 1839 2039 -6081 * 2512 154 52 4 chr10 40912449 40912911 -104676377 + LOR1-int LTR ERV1 2745 3228 -2718 357 204 92 71 chr10 40912915 40913111 -104676177 + LOR1-int LTR ERV1 3329 3528 -2418 260 333 0 0 chr10 40913381 40913465 -104675823 + L1MC/D LINE L1 5697 5780 -2028 21 0 0 0 chr10 40914496 40914517 -104674771 + AT_rich Low_complexity Low_complexity 1 21 0 938 248 28 0 chr10 40914729 40914947 -104674341 - MER58A DNA MER1_type 0 224 1 2159 177 40 113 chr10 40914996 40915625 -104673663 - LTR9 LTR ERV1 0 612 30 2070 134 0 13 chr10 40915625 40915930 -104673358 - AluSx SINE Alu -11 301 1 2159 177 40 113 chr10 40915930 40915945 -104673343 - LTR9 LTR ERV1 -582 30 15 1827 149 3 44 chr10 40916069 40916213 -104673075 + AluSx SINE Alu 1 149 -163 2045 86 0 0 chr10 40916213 40916469 -104672819 + AluSg SINE Alu 43 298 -12 1827 149 3 44 chr10 40916469 40916639 -104672649 + AluSx SINE Alu 149 302 -10 892 176 45 11 chr10 40917086 40917262 -104672026 - MLT1A2 LTR MaLR -4 370 189 268 222 13 12 chr10 40917282 40917532 -104671756 + GA-rich Low_complexity Low_complexity 1 250 0 736 162 45 39 chr10 40917563 40917717 -104671571 - MLT1A2 LTR MaLR -215 159 5 1234 208 20 0 chr10 40917748 40918003 -104671285 + MLT1B LTR MaLR 9 268 -122 4448 105 126 146 chr10 40918003 40919513 -104669775 + pTR5 LTR ERV1 743 2438 0 624 147 18 0 chr10 40919517 40919626 -104669662 + MLT1B LTR MaLR 266 376 -14 2207 109 0 0 chr10 40920465 40920759 -104668529 + AluSq SINE Alu 1 294 -19 4315 179 42 20 chr10 40921213 40922114 -104667174 - MER49 LTR ERV1 -2 921 1 1786 140 57 0 chr10 40923009 40923288 -104666000 - AluJb SINE Alu -17 295 1 2317 88 0 26 chr10 40923296 40923602 -104665686 - AluSx SINE Alu -14 298 1 38 0 0 0 chr10 40923602 40923640 -104665648 + AT_rich Low_complexity Low_complexity 1 38 0 1419 184 15 0 chr10 40923640 40923911 -104665377 - L1PA16 LINE L1 -14 6152 5878 205 302 56 79 chr10 40923911 40924037 -104665251 - L2 LINE L2 -8 3264 3142 1342 139 4 62 chr10 40926740 40926812 -104662476 - Tigger5 DNA MER2_type 0 2323 2248 1913 145 26 0 chr10 40926812 40927116 -104662172 + AluSx SINE Alu 1 312 0 1342 139 4 62 chr10 40927116 40927287 -104662001 - Tigger5 DNA MER2_type -75 2248 2094 1745 173 6 43 chr10 40928353 40928676 -104660612 - AluJo SINE Alu -1 311 1 712 183 85 12 chr10 40929396 40929560 -104659728 + MLT1B LTR MaLR 2 177 -213 522 167 48 24 chr10 40929605 40929773 -104659515 + (TCTCTG)n Simple_repeat Simple_repeat 3 174 0 659 202 105 20 chr10 40929776 40929960 -104659328 + MLT1B LTR MaLR 204 374 -16 268 324 112 0 chr10 40931362 40931532 -104657756 + MIR SINE MIR 74 262 0 257 61 0 0 chr10 40932262 40932295 -104656993 - L2 LINE L2 -19 3294 3262 1959 180 30 22 chr10 40932860 40933260 -104656028 - MER57A LTR ERV1 0 403 1 2230 103 0 42 chr10 40933685 40933996 -104655292 - AluSx SINE Alu -14 298 1 461 175 66 81 chr10 40934504 40934715 -104654573 + Charlie4a DNA MER1_type 207 414 -94 382 193 104 15 chr10 40934731 40934866 -104654422 + Charlie4a DNA MER1_type 356 502 -6 197 191 24 0 chr10 40934964 40935006 -104654282 + L2 LINE L2 3265 3307 -6 1440 193 57 33 chr10 40935243 40935611 -104653677 + LTR40b LTR ERVL 84 460 -2 1615 200 29 0 chr10 40936440 40936720 -104652568 - AluJo SINE Alu -24 288 1 720 219 65 145 chr10 40936722 40936900 -104652388 - L1ME LINE L1 -5165 905 714 2355 79 0 7 chr10 40936900 40937191 -104652097 - AluSg SINE Alu -21 289 1 720 219 65 145 chr10 40937191 40937216 -104652072 - L1ME LINE L1 -5356 714 689 2164 102 7 7 chr10 40937216 40937511 -104651777 + AluSp SINE Alu 1 295 -18 720 219 65 145 chr10 40937511 40937554 -104651734 - L1ME LINE L1 -5381 689 644 2087 127 10 19 chr10 40937554 40937862 -104651426 + AluSq SINE Alu 1 305 -8 720 219 65 145 chr10 40937862 40938270 -104651018 - L1ME LINE L1 -5426 644 301 3376 231 117 33 chr10 40938321 40939444 -104649844 - L1MC4 LINE L1 -299 7743 6527 1781 164 27 7 chr10 40941026 40941324 -104647964 - AluJb SINE Alu -8 304 1 2043 146 0 3 chr10 40941355 40941649 -104647639 + AluSg SINE Alu 1 293 -17 312 237 44 53 chr10 40941973 40942087 -104647201 - MLT1K LTR MaLR -323 265 153 231 290 32 0 chr10 40942205 40942267 -104647021 + L1 LINE L1 4911 4974 -1172 344 256 202 42 chr10 40942576 40942744 -104646544 - MLT1L LTR MaLR 0 615 421 775 266 40 0 chr10 40943064 40943286 -104646002 - MIR SINE MIR -21 241 11 336 269 0 0 chr10 40943288 40943366 -104645922 + MER58 DNA MER1_type 1 78 -137 25 0 0 0 chr10 40943732 40943757 -104645531 + AT_rich Low_complexity Low_complexity 1 25 0 2302 152 11 48 chr10 40943884 40944318 -104644970 - LTR3 LTR ERVK -10 422 5 6502 119 51 16 chr10 40944494 40945528 -104643760 + MER11C LTR ERVK 1 1071 0 2058 116 27 7 chr10 40945763 40946056 -104643232 - AluSx SINE Alu -11 301 3 1143 166 21 0 chr10 40946245 40946438 -104642850 + Tigger6 DNA MER2_type 1 197 -886 44285 45 4 3 chr10 40946440 40952589 -104636699 + L1PA4 LINE L1 2 6155 0 826 220 11 11 chr10 40952598 40952775 -104636513 + Tigger6 DNA MER2_type 182 358 -1239 2254 108 7 0 chr10 40952786 40953081 -104636207 + AluSg SINE Alu 1 297 -13 250 306 0 0 chr10 40953094 40953156 -104636132 + Tigger6 DNA MER2_type 1536 1597 0 1841 108 8 0 chr10 40953806 40954055 -104635233 + AluSx SINE Alu 41 291 -21 893 156 54 6 chr10 40954154 40954321 -104634967 + L1M3 LINE L1 5446 5620 -563 1637 165 71 43 chr10 40954326 40954678 -104634610 - MLT1B LTR MaLR -3 387 26 860 176 77 12 chr10 40954665 40954790 -104634498 + MLT2C1 LTR ERVL 217 357 -40 * 210 118 0 0 chr10 40954790 40954824 -104634464 + (CA)n Simple_repeat Simple_repeat 2 35 0 860 176 77 12 chr10 40954824 40954868 -104634420 + MLT2C1 LTR ERVL 357 397 0 376 211 56 106 chr10 40954928 40955108 -104634180 + MLT1D LTR MaLR 335 505 0 1955 139 37 7 chr10 40955576 40955871 -104633417 - AluSx SINE Alu -8 304 1 233 280 10 5 chr10 40956723 40956813 -104632475 + MIR SINE MIR 54 144 -64 240 267 95 52 chr10 40957644 40957760 -104631528 + MIR SINE MIR 77 197 -65 7790 29 17 0 chr10 40958337 40959500 -104629788 - L1PA2 LINE L1 -1 6154 4985 15523 33 2 1 chr10 40959500 40961341 -104627947 + L1PA2 LINE L1 3171 5014 -1132 255 203 176 0 chr10 40961855 40961929 -104627359 + MLT1C LTR MaLR 6 92 -375 286 122 0 0 chr10 40962183 40962224 -104627064 - MER70-int LTR ERVL -2428 2595 2555 852 201 34 95 chr10 40963010 40963274 -104626014 + MLT1C-int LTR MaLR 1123 1370 -1 2068 166 30 38 chr10 40963282 40963753 -104625535 + MLT1C LTR MaLR 1 467 0 978 238 23 4 chr10 40964130 40964386 -104624902 + L1M4 LINE L1 4951 5211 -935 2297 92 7 0 chr10 40964623 40964915 -104624373 - AluSp SINE Alu -19 294 1 535 326 50 16 chr10 40965053 40965311 -104623977 + ERVL LTR ERVL 2064 2330 -3434 282 295 112 27 chr10 40965306 40965530 -104623758 + ERVL LTR ERVL 2477 2719 -3045 * 1179 321 108 58 chr10 40965531 40966766 -104622522 + ERVL LTR ERVL 2698 4002 -1483 321 176 12 35 chr10 40967650 40967735 -104621553 - L1M4 LINE L1 -978 5168 5086 234 221 44 0 chr10 40967731 40967799 -104621489 + L1MB7 LINE L1 4677 4747 -1399 * 2141 129 0 0 chr10 40967799 40968093 -104621195 + AluY SINE Alu 1 294 -17 24 53 0 0 chr10 40968093 40968131 -104621157 + AT_rich Low_complexity Low_complexity 1 38 0 326 222 33 0 chr10 40968134 40968224 -104621064 + L1MB7 LINE L1 4741 4833 -1313 207 0 0 0 chr10 40968309 40968332 -104620956 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1270 215 96 45 chr10 40968333 40968788 -104620500 + L1MB7 LINE L1 4845 5275 -909 2248 103 23 0 chr10 40968788 40969088 -104620200 + AluSq SINE Alu 1 307 -6 1270 215 96 45 chr10 40969088 40969140 -104620148 + L1MB7 LINE L1 5275 5323 -861 2134 138 0 0 chr10 40969140 40969437 -104619851 + AluSx SINE Alu 1 297 -15 1270 215 96 45 chr10 40969437 40969674 -104619614 + L1MB7 LINE L1 5323 5939 -245 1395 157 0 0 chr10 40969678 40969888 -104619400 - AluSg/x SINE Alu -17 295 86 501 234 101 10 chr10 40969890 40970099 -104619189 + L1MB7 LINE L1 5941 6168 -16 2329 74 0 32 chr10 40970781 40971092 -104618196 + AluY SINE Alu 1 301 -10 1595 179 17 30 chr10 40971100 40971232 -104618056 + AluJo SINE Alu 1 133 -179 2359 77 3 22 chr10 40971232 40971510 -104617778 + AluSc SINE Alu 1 274 -35 243 0 0 0 chr10 40971510 40971537 -104617751 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 2359 77 3 22 chr10 40971537 40971571 -104617717 + AluSc SINE Alu 274 307 -2 1595 179 17 30 chr10 40971571 40971740 -104617548 + AluJo SINE Alu 133 298 -14 2324 77 40 3 chr10 40971844 40972143 -104617145 - AluY SINE Alu -1 310 1 343 180 0 0 chr10 40972530 40972591 -104616697 + L1MD3 LINE L1 6877 6937 -1058 1016 262 162 27 chr10 40972628 40973079 -104616209 - REP3 LTR ERV -50 512 1 491 213 140 0 chr10 40973079 40973243 -104616045 + L1MC3 LINE L1 6911 7097 -688 330 259 0 12 chr10 40973253 40973334 -104615954 + MLT1F1 LTR MaLR 46 125 -442 2063 203 91 15 chr10 40973334 40973853 -104615435 + L1MD3 LINE L1 7404 7969 -26 2214 93 0 10 chr10 40973853 40974144 -104615144 + AluSg SINE Alu 1 288 -22 2063 203 91 15 chr10 40974144 40974172 -104615116 + L1MD3 LINE L1 7969 7993 -2 1830 159 14 10 chr10 40977024 40977319 -104611969 - AluSx SINE Alu -15 297 2 650 181 39 8 chr10 40977829 40977956 -104611332 - MIR SINE MIR -67 195 65 3901 173 50 21 chr10 40978056 40979245 -104610043 + L1MB7 LINE L1 4947 6168 -16 389 243 35 28 chr10 40979256 40979400 -104609888 + L1MC4a LINE L1 5814 5958 -1850 21 104 0 0 chr10 40980013 40980090 -104609198 + AT_rich Low_complexity Low_complexity 1 77 0 1808 108 0 0 chr10 40980141 40980373 -104608915 + AluSc SINE Alu 62 293 -16 338 312 95 11 chr10 40980509 40980698 -104608590 + L1ME LINE L1 4811 5015 -1131 901 160 0 14 chr10 40980727 40980871 -104608417 + FLAM_C SINE Alu 1 142 -1 4559 103 0 2 chr10 40980922 40981553 -104607735 - L1PA15 LINE L1 -13 6152 5523 2370 103 0 0 chr10 40981561 40981863 -104607425 - AluSx SINE Alu -10 302 1 2068 124 0 0 chr10 40981897 40982187 -104607101 + AluY SINE Alu 2 291 -20 293 274 98 13 chr10 40982422 40982579 -104606709 + L1ME LINE L1 5360 5528 -638 1695 169 20 23 chr10 40983624 40983925 -104605363 - AluJo SINE Alu -12 300 1 356 295 74 25 chr10 40984770 40984892 -104604396 + MIR3 SINE MIR 3 130 -78 731 100 0 17 chr10 40984892 40985012 -104604276 - AluJb SINE Alu 0 312 195 22 56 0 0 chr10 40985175 40985211 -104604077 + AT_rich Low_complexity Low_complexity 1 36 0 1687 152 0 28 chr10 40985218 40985543 -104603745 - AluJb SINE Alu 0 317 1 300 240 13 0 chr10 40986066 40986141 -104603147 + L1M4 LINE L1 4866 4941 -1205 227 232 73 12 chr10 40986137 40986219 -104603069 + L1M4 LINE L1 2300 2386 -3760 * 819 195 129 9 chr10 40986230 40986440 -104602848 + MER93b LTR ERV1 113 347 -26 249 222 0 19 chr10 40986626 40986680 -104602608 + (CATATA)n Simple_repeat Simple_repeat 1 53 0 472 191 42 1 chr10 40986731 40986847 -104602441 - L1ME LINE L1 -452 5718 5598 2739 169 12 46 chr10 40986856 40987785 -104601503 - L1M3 LINE L1 -374 6045 5151 1187 118 0 0 chr10 40987785 40987946 -104601342 - AluSg/x SINE Alu -12 298 138 7222 199 84 96 chr10 40987947 40989073 -104600215 - L1M3 LINE L1 -1226 5156 4018 2069 144 0 22 chr10 40989073 40989386 -104599902 - AluSx SINE Alu -6 306 1 7222 199 84 96 chr10 40989386 40990068 -104599220 - L1M3 LINE L1 -2364 4018 3330 2071 161 0 0 chr10 40990068 40990379 -104598909 - AluSx SINE Alu -1 311 1 7222 199 84 96 chr10 40990379 40991284 -104598004 - L1M3 LINE L1 -3052 3330 2416 14598 143 39 30 chr10 40991284 40992227 -104597061 + Tigger2 DNA MER2_type 1 934 -1784 196 51 26 26 chr10 40992227 40992266 -104597022 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 14598 143 39 30 chr10 40992266 40992354 -104596934 + Tigger2 DNA MER2_type 934 1020 -1698 1748 169 6 44 chr10 40992354 40992674 -104596614 + AluJb SINE Alu 1 308 -4 14598 143 39 30 chr10 40992674 40992760 -104596528 + Tigger2 DNA MER2_type 1020 1104 -1614 2092 134 0 3 chr10 40992760 40993058 -104596230 + AluJb SINE Alu 6 302 -10 14598 143 39 30 chr10 40993058 40994631 -104594657 + Tigger2 DNA MER2_type 1104 2718 0 7222 199 84 96 chr10 40994631 40995855 -104593433 - L1M3 LINE L1 -3966 2416 1297 2172 113 10 16 chr10 40995855 40996165 -104593123 - AluSx SINE Alu -4 308 1 7222 199 84 96 chr10 40996165 40997293 -104591995 - L1M3 LINE L1 -5085 1297 157 2913 249 48 19 chr10 40997283 40998155 -104591133 - L1M4b LINE L1 -5873 986 90 * 21 0 0 0 chr10 40998168 40998189 -104591099 + AT_rich Low_complexity Low_complexity 1 21 0 2386 82 0 19 chr10 40998700 40999017 -104590271 - AluY SINE Alu 0 311 1 401 230 0 0 chr10 41001842 41001916 -104587372 - L1M4b LINE L1 -6775 84 11 234 226 65 16 chr10 41001925 41001987 -104587301 + L2 LINE L2 3167 3231 -82 596 297 43 5 chr10 41002066 41002251 -104587037 - MIR SINE MIR -70 192 1 28 29 0 0 chr10 41003360 41003395 -104585893 + AT_rich Low_complexity Low_complexity 1 35 0 1452 140 9 0 chr10 41003452 41003680 -104585608 + MER30 DNA MER1_type 1 230 0 2512 81 0 0 chr10 41003855 41004164 -104585124 + AluSc SINE Alu 1 309 0 2176 136 0 0 chr10 41004364 41004673 -104584615 - AluSx SINE Alu -1 311 3 1281 223 130 30 chr10 41004784 41005246 -104584042 - MLT2B2 LTR ERVL -7 508 1 2402 76 0 22 chr10 41005475 41005789 -104583499 - AluY SINE Alu -4 307 1 1850 179 0 7 chr10 41006241 41006542 -104582746 - AluJb SINE Alu -13 299 1 236 250 46 40 chr10 41006741 41006893 -104582395 + L1ME LINE L1 5671 5823 -298 226 300 73 0 chr10 41008858 41008968 -104580320 - MER112 DNA MER1_type -45 215 98 302 209 229 46 chr10 41009014 41009167 -104580121 + L2 LINE L2 2964 3144 -169 435 270 135 30 chr10 41010019 41010219 -104579069 + LTR33 LTR ERVL 301 521 0 280 273 0 0 chr10 41011403 41011412 -104577876 + (TA)n Simple_repeat Simple_repeat 1 9 -68 1789 160 117 10 chr10 41011412 41011805 -104577483 + MER63B DNA MER1_type 1 435 -1 280 273 0 0 chr10 41011805 41011872 -104577416 + (TA)n Simple_repeat Simple_repeat 8 77 0 197 65 32 0 chr10 41014950 41014981 -104574307 + (TAA)n Simple_repeat Simple_repeat 1 32 0 180 111 0 0 chr10 41015828 41015855 -104573433 + (GAAAA)n Simple_repeat Simple_repeat 4 30 0 181 292 69 0 chr10 41016183 41016255 -104573033 + L2 LINE L2 2008 2084 -1230 223 271 7 21 chr10 41016394 41016479 -104572809 + GA-rich Low_complexity Low_complexity 2 138 0 491 268 0 0 chr10 41016481 41016593 -104572695 + MER58C DNA MER1_type 104 215 0 1520 297 89 30 chr10 41016593 41017503 -104571785 + L2 LINE L2 2176 3150 -163 354 143 0 0 chr10 41017547 41017610 -104571678 + (CA)n Simple_repeat Simple_repeat 2 64 0 2087 114 0 4 chr10 41017902 41018214 -104571074 - AluSc SINE Alu 0 311 1 303 348 9 17 chr10 41019066 41019181 -104570107 - L2 LINE L2 -23 3249 3136 281 295 0 13 chr10 41019542 41019691 -104569597 + L1MC/D LINE L1 979 1125 -5247 1767 256 46 5 chr10 41019709 41020150 -104569138 + MER68 LTR ERV1 1 532 -73 385 200 12 12 chr10 41020153 41020233 -104569055 + L1MC3 LINE L1 6669 6748 -1037 291 93 0 0 chr10 41020302 41020345 -104568943 + (CA)n Simple_repeat Simple_repeat 2 44 0 296 267 0 0 chr10 41020347 41020433 -104568855 + L1MC/D LINE L1 1041 1126 -5258 * 1670 231 54 32 chr10 41020411 41020999 -104568289 + L1MC/D LINE L1 2654 3254 -3128 1472 208 57 6 chr10 41020972 41021428 -104567860 + L1MC/D LINE L1 5356 5841 -743 * 1168 131 17 0 chr10 41021432 41021608 -104567680 + AluSg/x SINE Alu 131 309 -3 794 178 89 23 chr10 41021608 41021822 -104567466 + L1MC3 LINE L1 6756 6983 -802 3950 141 108 9 chr10 41022251 41023008 -104566280 + L1MC3 LINE L1 6945 7776 -9 1311 278 96 65 chr10 41023054 41023957 -104565331 + L1M4 LINE L1 3 933 -5609 2070 92 75 20 chr10 41023962 41024255 -104565033 + AluSc SINE Alu 1 309 0 1752 247 91 23 chr10 41024255 41024938 -104564350 + L1M4 LINE L1 981 1709 -4833 1779 226 193 26 chr10 41024959 41025683 -104563605 + L1M4 LINE L1 1803 2647 -3999 372 136 34 51 chr10 41025686 41025804 -104563484 + CT-rich Low_complexity Low_complexity 5 120 0 1653 179 13 22 chr10 41025806 41026119 -104563169 - AluJb SINE Alu -2 310 1 341 152 0 15 chr10 41026121 41026187 -104563101 + L1M4 LINE L1 2642 2706 -3940 370 303 130 30 chr10 41026307 41026538 -104562750 + L1MEc LINE L1 1541 1794 -4602 325 222 74 22 chr10 41026649 41026784 -104562504 + L1ME LINE L1 5430 5571 -591 1249 229 8 16 chr10 41026790 41027048 -104562240 + LTR39 LTR ERV1 528 783 0 546 200 246 73 chr10 41027050 41027153 -104562135 + L1MC5 LINE L1 7144 7228 -733 1546 181 9 48 chr10 41027153 41027468 -104561820 + AluJo SINE Alu 1 303 -9 546 200 246 73 chr10 41027468 41027828 -104561460 + L1MC5 LINE L1 7228 7687 -274 910 166 57 0 chr10 41027852 41028009 -104561279 - AluSg/x SINE Alu -27 283 118 517 136 12 0 chr10 41028009 41028090 -104561198 - AluS SINE Alu -6 305 224 783 235 47 13 chr10 41028218 41028452 -104560836 + L1MC4 LINE L1 7742 7983 -59 516 224 128 32 chr10 41028486 41028705 -104560583 + L1MC5 LINE L1 7692 7931 -30 1950 125 7 26 chr10 41028790 41029095 -104560193 + AluSx SINE Alu 1 299 -13 2120 113 3 13 chr10 41029103 41029405 -104559883 + AluSx SINE Alu 1 299 -13 285 318 75 16 chr10 41029698 41029953 -104559335 + HAL1 LINE L1 811 1080 -1427 857 214 22 56 chr10 41029954 41030132 -104559156 + FRAM SINE Alu 1 172 -4 2080 91 7 20 chr10 41030201 41030498 -104558790 + AluY SINE Alu 1 293 -18 2120 127 0 7 chr10 41030592 41030884 -104558404 + AluSg SINE Alu 1 290 -20 2313 227 41 34 chr10 41031197 41031905 -104557383 + L1MD2 LINE L1 4590 5302 -844 3215 129 42 2 chr10 41031911 41032419 -104556869 + MER34B LTR ERV1 1 510 -55 1585 171 91 86 chr10 41032456 41032767 -104556521 + L1MD2 LINE L1 5330 5638 -721 2378 88 3 0 chr10 41032767 41033062 -104556226 + AluSp SINE Alu 1 296 -17 1585 171 91 86 chr10 41033062 41033388 -104555900 + L1MD2 LINE L1 5638 6106 -253 316 139 0 0 chr10 41033392 41033435 -104555853 + Alu SINE Alu 240 282 -20 359 149 37 0 chr10 41033439 41033546 -104555742 + (TA)n Simple_repeat Simple_repeat 2 112 0 638 266 119 40 chr10 41033599 41033672 -104555616 + L1MC4a LINE L1 1226 1292 -5104 1995 84 62 7 chr10 41033672 41033946 -104555342 - AluSc SINE Alu -20 289 1 638 266 119 40 chr10 41033946 41034180 -104555108 + L1MC4a LINE L1 1292 1506 -4890 2140 103 0 7 chr10 41034180 41034481 -104554807 - AluSx SINE Alu -13 299 1 638 266 119 40 chr10 41034481 41034871 -104554417 + L1MC4a LINE L1 1506 1979 -4417 279 276 68 45 chr10 41034884 41035148 -104554140 + L1MC4a LINE L1 5041 5310 -905 1158 283 165 9 chr10 41035179 41035706 -104553582 + L1MC4a LINE L1 5365 5973 -1904 257 259 25 12 chr10 41035711 41035792 -104553496 + MER5A DNA MER1_type 28 109 -80 553 214 53 30 chr10 41035976 41036107 -104553181 - MER94 DNA DNA 0 134 1 221 322 58 50 chr10 41037635 41037756 -104551532 + MIR SINE MIR 25 146 -62 225 286 0 0 chr10 41038280 41038343 -104550945 - MIR SINE MIR -81 181 119 384 259 76 15 chr10 41038989 41039120 -104550168 + MIR SINE MIR 111 249 -13 1662 167 60 18 chr10 41039656 41039896 -104549392 - L1MD3 LINE L1 0 7995 7736 6230 63 33 4 chr10 41039896 41040654 -104548634 - LTR17 LTR ERV1 0 780 1 1662 167 60 18 chr10 41040654 41040748 -104548540 - L1MD3 LINE L1 -259 7736 7647 438 151 55 14 chr10 41040760 41040833 -104548455 - AluS SINE Alu -235 77 2 1055 203 37 164 chr10 41040834 41041523 -104547765 + LTR8A LTR ERV1 138 714 -13 836 148 93 38 chr10 41041533 41041666 -104547622 - L1MD3 LINE L1 -402 7593 7446 1053 210 132 88 chr10 41041666 41042052 -104547236 + MER57A LTR ERV1 1 403 0 836 148 93 38 chr10 41042052 41042101 -104547187 - L1MD3 LINE L1 -549 7446 7401 374 191 225 0 chr10 41042111 41042200 -104547088 - MLT1F1 LTR MaLR -458 109 1 579 197 98 0 chr10 41042201 41042333 -104546955 - L1MC4a LINE L1 -581 7227 7083 258 180 40 0 chr10 41042337 41042387 -104546901 - MER4A LTR ERV1 0 664 613 804 167 92 46 chr10 41042390 41042564 -104546724 + AluSg1 SINE Alu 2 183 -126 997 133 0 78 chr10 41042564 41042744 -104546544 - MER4A LTR ERV1 -102 562 397 1990 134 0 3 chr10 41042744 41043060 -104546228 - AluSq SINE Alu 0 315 1 1289 197 38 84 chr10 41043068 41043347 -104545941 - L1M4 LINE L1 -945 5201 4947 2355 85 20 0 chr10 41043347 41043653 -104545635 - AluSq SINE Alu -1 312 1 1289 197 38 84 chr10 41043653 41043800 -104545488 - L1M4 LINE L1 -1199 4947 4795 1640 183 114 17 chr10 41043801 41044114 -104545174 + MSTD LTR MaLR 1 355 -41 2348 163 58 15 chr10 41044114 41044524 -104544764 + MSTA LTR MaLR 1 428 0 1640 183 114 17 chr10 41044524 41044571 -104544717 + MSTD LTR MaLR 355 396 0 2127 209 22 15 chr10 41044577 41044998 -104544290 + MSTD-int LTR MaLR 5 431 -1304 1588 115 0 41 chr10 41044998 41045241 -104544047 - AluSq SINE Alu -15 298 66 2127 209 22 15 chr10 41045241 41045278 -104544010 + MSTD-int LTR MaLR 431 466 -1269 2315 108 0 0 chr10 41045280 41045576 -104543712 - AluSx SINE Alu -16 296 1 2440 92 0 3 chr10 41045576 41045882 -104543406 - AluSg SINE Alu -5 305 1 654 215 96 28 chr10 41046064 41046336 -104542952 + MLT2D LTR ERVL 1 341 -73 694 109 10 0 chr10 41046663 41046757 -104542531 + MSTA LTR MaLR 3 97 -331 2387 43 43 70 chr10 41046757 41047102 -104542186 + LTR2B LTR ERV1 1 336 -154 266 231 77 22 chr10 41047602 41047693 -104541595 - MIR SINE MIR -88 120 25 290 256 427 0 chr10 41048445 41048562 -104540726 - MER5A DNA MER1_type 0 189 23 218 152 0 22 chr10 41048611 41048657 -104540631 + (TA)n Simple_repeat Simple_repeat 2 46 0 245 191 67 56 chr10 41048676 41048765 -104540523 - L1MC4 LINE L1 -1342 6700 6611 2255 102 0 10 chr10 41048950 41049263 -104540025 - AluSg SINE Alu 0 310 1 1401 181 40 0 chr10 41049689 41049966 -104539322 - L1MB5 LINE L1 -8 6664 6377 840 152 94 53 chr10 41049966 41050129 -104539159 - AluJo SINE Alu -15 297 125 4601 189 50 17 chr10 41050134 41051673 -104537615 - L1MB5 LINE L1 -291 6381 4780 2371 104 0 0 chr10 41051673 41051982 -104537306 - AluSc SINE Alu 0 309 1 4601 189 50 17 chr10 41051982 41052082 -104537206 - L1MB5 LINE L1 -1892 4780 4685 767 226 77 39 chr10 41052084 41052318 -104536970 - L1MB5 LINE L1 -5849 693 451 1828 166 12 98 chr10 41052502 41052664 -104536624 + MLT1B LTR MaLR 1 175 -215 2221 150 132 11 chr10 41052664 41053043 -104536245 - MSTA LTR MaLR -3 425 1 1828 166 12 98 chr10 41053043 41053307 -104535981 + MLT1B LTR MaLR 175 390 0 536 286 78 10 chr10 41053313 41053519 -104535769 - L1MB5 LINE L1 -6316 226 7 1959 168 124 24 chr10 41053714 41054173 -104535115 - MLT1D LTR MaLR 0 505 1 298 268 183 0 chr10 41054381 41054523 -104534765 - L1ME LINE L1 -304 5858 5691 1717 146 14 22 chr10 41054555 41054830 -104534458 + AluJo SINE Alu 1 273 -39 253 263 82 82 chr10 41054867 41054906 -104534382 - L1ME LINE L1 -565 5556 5518 2479 79 0 0 chr10 41054906 41055210 -104534078 - AluY SINE Alu -7 304 1 253 263 82 82 chr10 41055210 41055341 -104533947 - L1ME LINE L1 -602 5519 5386 2378 78 3 0 chr10 41055445 41055741 -104533547 - AluSp SINE Alu -15 298 2 180 0 0 0 chr10 41055741 41055761 -104533527 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1942 131 0 17 chr10 41055761 41055914 -104533374 - AluSx SINE Alu -26 286 139 1890 113 0 55 chr10 41055914 41056207 -104533081 - AluSq SINE Alu -14 299 23 1942 131 0 17 chr10 41056207 41056344 -104532944 - AluSx SINE Alu -173 139 1 1260 300 89 43 chr10 41056390 41057118 -104532170 - L1MC4a LINE L1 -1352 7251 6463 2197 104 10 16 chr10 41057118 41057427 -104531861 - AluSx SINE Alu -5 307 1 1260 300 89 43 chr10 41057427 41057700 -104531588 - L1MC4a LINE L1 -2140 6463 6204 2072 108 0 40 chr10 41057725 41057908 -104531380 - AluSx SINE Alu 0 308 119 189 0 0 0 chr10 41057908 41057929 -104531359 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2034 120 3 11 chr10 41057929 41058213 -104531075 - AluSg SINE Alu -28 282 1 2072 108 0 40 chr10 41058213 41058348 -104530940 - AluSx SINE Alu -187 121 1 1690 197 3 7 chr10 41058523 41058822 -104530466 + AluJo SINE Alu 1 298 -14 243 254 30 15 chr10 41058948 41059015 -104530273 + MER5B DNA MER1_type 1 68 -110 252 162 15 73 chr10 41059043 41059111 -104530177 - L1MC4 LINE L1 -504 7538 7475 2205 123 0 0 chr10 41059111 41059412 -104529876 - AluSg SINE Alu -9 301 1 941 278 71 22 chr10 41059587 41060242 -104529046 - L1MC4a LINE L1 -745 6214 5524 1323 210 241 22 chr10 41060248 41060535 -104528753 - MLT1E1 LTR MaLR 0 654 431 2361 77 0 0 chr10 41060535 41060821 -104528467 - AluSg SINE Alu -24 286 1 1323 210 241 22 chr10 41060821 41060994 -104528294 - MLT1E1 LTR MaLR -223 431 93 24 32 0 0 chr10 41061114 41061145 -104528143 + AT_rich Low_complexity Low_complexity 1 31 0 207 0 0 0 chr10 41061157 41061180 -104528108 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 848 156 0 14 chr10 41061188 41061329 -104527959 - AluSg/x SINE Alu -37 273 135 2033 95 53 0 chr10 41061376 41061659 -104527629 - AluSg SINE Alu -12 298 1 1081 254 45 89 chr10 41061659 41061938 -104527350 - L1MC4a LINE L1 -1476 5465 5175 2399 87 0 0 chr10 41061938 41062237 -104527051 - AluY SINE Alu -12 299 1 1081 254 45 89 chr10 41062237 41062313 -104526975 - L1MC4a LINE L1 -1766 5175 5097 2295 103 7 0 chr10 41062313 41062614 -104526674 - AluSp SINE Alu -10 303 1 1081 254 45 89 chr10 41062614 41062627 -104526661 - L1MC4a LINE L1 -1844 5097 5085 2158 113 0 0 chr10 41062627 41062927 -104526361 - AluY SINE Alu -11 300 1 1081 254 45 89 chr10 41062927 41063118 -104526170 - L1MC4a LINE L1 -1856 5085 4929 2470 80 3 0 chr10 41063436 41063736 -104525552 + AluSp SINE Alu 1 301 -12 2277 99 7 3 chr10 41064986 41065289 -104523999 + AluSx SINE Alu 1 304 -8 2037 290 97 33 chr10 41065310 41065984 -104523304 - L2 LINE L2 -31 3282 2653 2185 117 0 7 chr10 41065984 41066282 -104523006 + AluSx SINE Alu 1 296 -16 2037 290 97 33 chr10 41066282 41066829 -104522459 - L2 LINE L2 -660 2653 1982 1981 143 7 3 chr10 41067976 41068270 -104521018 + AluSx SINE Alu 1 295 -17 246 321 99 43 chr10 41068345 41068719 -104520569 + HAL1b LINE L1 78 472 -876 774 231 140 24 chr10 41069201 41069468 -104519820 - L1MC4a LINE L1 -3598 3343 3030 2285 103 3 3 chr10 41069468 41069768 -104519520 - AluSg SINE Alu -10 300 1 774 231 140 24 chr10 41069768 41069829 -104519459 - L1MC4a LINE L1 -3911 3030 2977 787 127 0 0 chr10 41069830 41069940 -104519348 - AluSx SINE Alu -9 303 194 1041 135 0 0 chr10 41069941 41070082 -104519206 - AluSx SINE Alu -171 141 1 263 269 90 6 chr10 41070087 41070254 -104519034 - L1MC4a LINE L1 -4102 3020 2840 1290 142 49 0 chr10 41070275 41070479 -104518809 + Tigger4(Zombi) DNA MER2_type 1 214 -2517 2166 127 132 5 chr10 41070519 41070890 -104518398 - MSTA LTR MaLR -10 418 1 544 78 0 165 chr10 41070927 41071030 -104518258 + Tigger4(Zombi) DNA MER2_type 2646 2731 0 429 232 16 24 chr10 41071034 41071159 -104518129 - L1MC4a LINE L1 -4306 2816 2693 1144 189 59 8 chr10 41071197 41071435 -104517853 - AluJb SINE Alu -9 303 54 1027 255 124 39 chr10 41071441 41072013 -104517275 - L1MC4a LINE L1 -4455 2667 2047 653 256 110 0 chr10 41072102 41072293 -104516995 - L1MC4a LINE L1 -5381 1042 831 416 240 0 3 chr10 41072307 41072414 -104516874 - MER2 DNA MER2_type -133 106 1 2200 108 0 3 chr10 41073863 41074149 -104515139 + AluSx SINE Alu 5 289 -23 2125 119 3 0 chr10 41074149 41074444 -104514844 + AluSx SINE Alu 1 296 -16 25 0 0 0 chr10 41074481 41074506 -104514782 + AT_rich Low_complexity Low_complexity 1 25 0 2300 107 7 0 chr10 41074640 41074950 -104514338 - AluSp SINE Alu -1 312 1 38 39 0 0 chr10 41075034 41075086 -104514202 + AT_rich Low_complexity Low_complexity 1 52 0 43157 36 24 2 chr10 41077772 41083790 -104505498 + L1PA2 LINE L1 2 6154 -1 2234 221 62 94 chr10 41085371 41085438 -104503850 - L1ME2 LINE L1 0 6164 6096 1971 152 52 33 chr10 41085438 41085806 -104503482 + THE1C LTR MaLR 1 375 0 2234 221 62 94 chr10 41085806 41085863 -104503425 - L1ME2 LINE L1 -68 6096 6039 7636 41 10 5 chr10 41085863 41086745 -104502543 + L1PA6 LINE L1 5262 6148 -6 2234 221 62 94 chr10 41086745 41086859 -104502429 - L1ME2 LINE L1 -125 6039 5923 665 140 149 0 chr10 41086859 41086973 -104502315 - FLAM_C SINE Alu -2 131 1 2234 221 62 94 chr10 41086973 41087220 -104502068 - L1ME2 LINE L1 -241 5923 5670 1987 170 66 47 chr10 41087220 41087644 -104501644 + MSTB1 LTR MaLR 1 432 0 2234 221 62 94 chr10 41087644 41088092 -104501196 - L1ME2 LINE L1 -494 5670 5258 1034 150 0 6 chr10 41088112 41088272 -104501016 - AluSp SINE Alu -5 308 150 1817 230 66 78 chr10 41088409 41088633 -104500655 - L1ME2 LINE L1 -1142 5004 4779 2159 138 14 46 chr10 41088633 41088981 -104500307 + MER1B DNA MER1_type 1 337 0 1817 230 66 78 chr10 41088981 41089097 -104500191 - L1ME2 LINE L1 -1367 4779 4663 2269 105 0 0 chr10 41089097 41089392 -104499896 - AluSx SINE Alu -16 296 2 1817 230 66 78 chr10 41089392 41089836 -104499452 - L1ME2 LINE L1 -1483 4663 4228 5070 137 33 35 chr10 41089837 41090350 -104498938 - Tigger3b DNA MER2_type -1798 1230 717 2175 117 7 0 chr10 41090350 41090648 -104498640 - AluSq SINE Alu -13 300 1 5070 137 33 35 chr10 41090648 41090784 -104498504 - Tigger3b DNA MER2_type -2311 717 582 1776 156 17 13 chr10 41090784 41091085 -104498203 - AluJb SINE Alu -10 302 1 5070 137 33 35 chr10 41091085 41091345 -104497943 - Tigger3b DNA MER2_type -2446 582 322 2232 178 52 24 chr10 41091345 41091766 -104497522 - Tigger2a DNA MER2_type -1 433 1 4292 196 45 19 chr10 41091766 41092395 -104496893 - L1MA9 LINE L1 -44 7289 6678 2207 100 24 0 chr10 41092395 41092686 -104496602 - AluSp SINE Alu -15 298 1 4292 196 45 19 chr10 41092686 41093498 -104495790 - L1MA9 LINE L1 -655 6678 5813 1558 222 45 26 chr10 41093506 41093884 -104495404 - L1MA9 LINE L1 -6781 387 3 2121 233 91 6 chr10 41093897 41093926 -104495362 - L1MDb LINE L1 -5308 1098 1073 2122 106 0 3 chr10 41093926 41094208 -104495080 - AluSx SINE Alu -31 281 1 2121 233 91 6 chr10 41094208 41095086 -104494202 - L1MDb LINE L1 -5333 1073 4 896 247 112 55 chr10 41095062 41095316 -104493972 - L1MEc LINE L1 -4172 2415 2177 * 2270 97 0 13 chr10 41095316 41095614 -104493674 - AluSx SINE Alu -18 294 1 896 247 112 55 chr10 41095614 41095685 -104493603 - L1MEc LINE L1 -4410 2177 2111 1905 93 90 0 chr10 41095685 41095953 -104493335 - AluSc SINE Alu -17 292 1 896 247 112 55 chr10 41095953 41096370 -104492918 - L1MEc LINE L1 -4476 2111 1630 2017 138 0 24 chr10 41096395 41096693 -104492595 - AluSx SINE Alu -21 291 1 752 183 73 74 chr10 41096930 41097116 -104492172 - L1MC4 LINE L1 -7 8035 7850 1639 181 24 7 chr10 41097116 41097408 -104491880 + AluJb SINE Alu 1 297 -15 752 183 73 74 chr10 41097408 41097447 -104491841 - L1MC4 LINE L1 -192 7850 7541 * 1585 214 69 18 chr10 41097441 41097834 -104491454 - L1MB7 LINE L1 -155 6029 5617 2239 159 151 75 chr10 41097852 41098485 -104490803 - LTR25 LTR ERV1 0 794 62 2163 118 0 10 chr10 41098485 41098789 -104490499 + AluSx SINE Alu 1 301 -11 2239 159 151 75 chr10 41098789 41098816 -104490472 - LTR25 LTR ERV1 -732 62 38 437 113 0 0 chr10 41098836 41098898 -104490390 - L1MB7 LINE L1 -561 5619 5558 * 1113 216 50 11 chr10 41098890 41099173 -104490115 + L1MC/D LINE L1 590 883 -5162 2973 186 104 42 chr10 41099235 41100294 -104488994 + L1MC/D LINE L1 894 2109 -4455 622 203 27 59 chr10 41100305 41100385 -104488903 + L1MC/D LINE L1 2179 2260 -4304 2989 83 11 5 chr10 41100385 41100758 -104488530 - THE1C LTR MaLR 0 375 1 622 203 27 59 chr10 41100758 41100864 -104488424 + L1MC/D LINE L1 2260 2359 -4205 1544 159 41 12 chr10 41100898 41101265 -104488023 + L1MC/D LINE L1 5612 5985 -743 1997 130 58 0 chr10 41101269 41101561 -104487727 + AluSx SINE Alu 1 309 -3 4173 158 60 15 chr10 41101594 41101657 -104487631 + L1P4 LINE L1 4351 4410 -1755 2069 107 4 7 chr10 41101657 41101970 -104487318 + AluSg SINE Alu 1 312 0 4173 158 60 15 chr10 41101970 41103174 -104486114 + L1P4 LINE L1 4410 5688 -477 * 6427 176 14 5 chr10 41103160 41103701 -104485587 + L1MB1 LINE L1 4083 4618 -1528 2324 100 7 0 chr10 41103701 41104011 -104485277 + AluSx SINE Alu 1 312 0 6427 176 14 5 chr10 41104011 41104643 -104484645 + L1MB1 LINE L1 4618 5266 -880 2190 114 0 3 chr10 41104647 41104944 -104484344 + AluSg SINE Alu 1 296 -14 1828 68 25 0 chr10 41104945 41105182 -104484106 + L1MA1 LINE L1 6059 6301 -1 2875 150 35 33 chr10 41105182 41105549 -104483739 + L1PA15 LINE L1 5643 6034 -131 2247 115 0 3 chr10 41105549 41105853 -104483435 + AluSx SINE Alu 2 304 -8 2875 150 35 33 chr10 41105853 41105983 -104483305 + L1PA15 LINE L1 6034 6162 -3 2360 233 106 7 chr10 41105984 41106685 -104482603 + L1M4 LINE L1 2110 2879 -3267 * 4269 164 25 13 chr10 41106684 41107214 -104482074 + L1MB1 LINE L1 5392 5914 -254 885 170 110 60 chr10 41107214 41107414 -104481874 - MER6B DNA MER2_type 0 210 1 4269 164 25 13 chr10 41107414 41107603 -104481685 + L1MB1 LINE L1 5914 6123 -45 2359 85 3 0 chr10 41107603 41107898 -104481390 + AluSg SINE Alu 1 296 -14 4269 164 25 13 chr10 41107898 41107945 -104481343 + L1MB1 LINE L1 6123 6168 0 2282 104 0 3 chr10 41108031 41108330 -104480958 + AluSq SINE Alu 2 299 -14 251 270 130 0 chr10 41108349 41108464 -104480824 + L1M4 LINE L1 2857 2986 -3160 824 272 51 12 chr10 41108468 41108799 -104480489 - L1ME LINE L1 -4510 1751 1408 495 271 93 16 chr10 41108893 41109151 -104480137 - L1ME LINE L1 -4981 1089 845 491 257 46 0 chr10 41109206 41109315 -104479973 + MER81 DNA DNA 1 114 0 2578 145 14 11 chr10 41109343 41109784 -104479504 - L1MB7 LINE L1 -49 6135 5694 2415 94 0 0 chr10 41109796 41110093 -104479195 - AluY SINE Alu -14 297 1 721 160 33 73 chr10 41110356 41110506 -104478782 + AluJo SINE Alu 82 225 -87 1619 171 79 0 chr10 41110580 41110872 -104478416 - MLT1A1 LTR MaLR -2 363 49 973 336 111 32 chr10 41111003 41111869 -104477419 - ERVL LTR ERVL -1259 4505 3572 2375 104 57 28 chr10 41111913 41112267 -104477021 - THE1B LTR MaLR 0 364 1 1636 185 10 13 chr10 41112297 41112600 -104476688 - AluSx SINE Alu -5 307 6 2230 118 3 0 chr10 41112609 41112905 -104476383 - AluSq SINE Alu -16 297 1 2162 116 0 7 chr10 41112917 41113210 -104476078 - AluSp SINE Alu -22 291 1 1689 179 14 0 chr10 41113216 41113501 -104475787 - AluJb SINE Alu -23 289 1 303 102 0 0 chr10 41113501 41113550 -104475738 - L1MA8 LINE L1 -22 6269 6221 238 217 0 0 chr10 41113540 41113586 -104475702 + L1MC4 LINE L1 6656 6701 -1341 * 1627 140 83 88 chr10 41113579 41113782 -104475506 - L1MA8 LINE L1 -29 6262 6060 1788 92 135 11 chr10 41113782 41114042 -104475246 - AluSg1 SINE Alu -17 292 1 1627 140 83 88 chr10 41114042 41114246 -104475042 - L1MA8 LINE L1 -231 6060 5857 734 352 38 14 chr10 41114614 41115037 -104474251 - ERVL LTR ERVL -2688 3076 2644 2401 175 26 36 chr10 41115628 41116131 -104473157 + LTR6B LTR ERV1 61 558 0 10558 196 24 16 chr10 41116133 41119547 -104469741 + HERVS71 LTR ERV1 4 3597 -5381 29666 186 5 2 chr10 41119554 41124694 -104464594 + HERVS71 LTR ERV1 3721 8909 -69 461 155 36 12 chr10 41124694 41124778 -104464510 + LTR6A LTR ERV1 1 86 -478 1493 227 0 0 chr10 41124796 41125073 -104464215 - HERVS71 LTR ERV1 -730 8248 7972 2088 146 0 0 chr10 41125327 41125622 -104463666 - AluSx SINE Alu -17 295 1 1674 204 101 28 chr10 41125738 41126203 -104463085 + MER74B LTR ERVL 47 545 -77 234 275 0 29 chr10 41126144 41126213 -104463075 - MER88 LTR ERVL -311 153 87 * 2016 138 7 7 chr10 41126293 41126589 -104462699 - AluSx SINE Alu -16 296 1 2356 87 3 7 chr10 41126768 41127067 -104462221 + AluSg SINE Alu 1 298 -12 2273 119 0 0 chr10 41127068 41127371 -104461917 + AluSc SINE Alu 2 304 -5 1962 150 6 22 chr10 41127755 41127928 -104461360 - AluSq SINE Alu -5 308 141 2137 105 14 7 chr10 41127928 41128223 -104461065 - AluSg SINE Alu -13 297 1 1962 150 6 22 chr10 41128223 41128362 -104460926 - AluSq SINE Alu -172 141 1 315 267 135 25 chr10 41128544 41128798 -104460490 - MLT1H LTR MaLR -34 521 204 377 147 56 17 chr10 41128828 41128921 -104460367 - MLT1H LTR MaLR -378 171 32 1536 161 56 0 chr10 41129420 41129669 -104459619 - AluSx SINE Alu -45 267 5 22 0 0 0 chr10 41129731 41129753 -104459535 + AT_rich Low_complexity Low_complexity 1 22 0 1833 160 0 27 chr10 41130066 41130366 -104458922 + AluJb SINE Alu 5 296 -16 1208 201 104 36 chr10 41130942 41131251 -104458037 - MER58B DNA MER1_type -11 330 1 584 240 173 18 chr10 41131411 41131636 -104457652 - MIR SINE MIR -1 261 2 2199 122 0 0 chr10 41135673 41135968 -104453320 + AluSx SINE Alu 1 295 -17 1984 124 13 23 chr10 41136478 41136784 -104452504 - AluSx SINE Alu -9 303 1 341 283 0 0 chr10 41136802 41136894 -104452394 - L2 LINE L2 0 3313 3222 2311 100 7 0 chr10 41137436 41137736 -104451552 + AluSp SINE Alu 1 302 -11 302 305 55 31 chr10 41138506 41138589 -104450699 - L2 LINE L2 -4 3309 3220 1929 161 52 3 chr10 41138589 41138918 -104450370 + MER7A DNA MER2_type 3 345 -1 302 305 55 31 chr10 41138918 41138962 -104450326 - L2 LINE L2 -93 3220 3179 449 200 0 11 chr10 41139443 41139533 -104449755 + AluSg/x SINE Alu 138 226 -83 21 0 0 31 chr10 41139551 41139567 -104449721 + AT_rich Low_complexity Low_complexity 1 16 -15 2003 139 0 3 chr10 41139567 41139855 -104449433 + AluSx SINE Alu 1 287 -25 21 0 0 31 chr10 41139855 41139870 -104449418 + AT_rich Low_complexity Low_complexity 16 31 0 225 311 0 0 chr10 41140296 41140370 -104448918 - L1M4 LINE L1 -3129 3017 2944 * 238 156 22 0 chr10 41140362 41140407 -104448881 - HAL1b LINE L1 -811 537 492 2337 99 0 0 chr10 41140407 41140711 -104448577 - AluSx SINE Alu -8 304 1 1359 106 0 0 chr10 41140713 41140892 -104448396 - AluY SINE Alu -9 302 124 2435 75 0 31 chr10 41141134 41141453 -104447835 + AluY SINE Alu 1 309 -2 345 273 85 12 chr10 41142164 41142329 -104446959 + HAL1 LINE L1 1475 1651 -856 2399 88 3 3 chr10 41142441 41142746 -104446542 + AluSp SINE Alu 1 305 -8 2197 96 3 26 chr10 41142756 41143058 -104446230 + AluSg SINE Alu 1 295 -15 407 250 72 0 chr10 41143229 41143381 -104445907 + L1M4c LINE L1 2937 3099 -3283 747 259 29 38 chr10 41143425 41143741 -104445547 + L1M4c LINE L1 3434 3746 -2636 310 267 17 35 chr10 41143746 41143862 -104445426 + L1MB5 LINE L1 23 136 -6248 1992 137 3 26 chr10 41143893 41144223 -104445065 - AluSx SINE Alu 0 312 1 2713 142 9 34 chr10 41144302 41144496 -104444792 + MSTB LTR MaLR 1 198 -228 2166 137 0 0 chr10 41144496 41144802 -104444486 + AluSx SINE Alu 3 308 -4 2713 142 9 34 chr10 41144802 41145044 -104444244 + MSTB LTR MaLR 198 426 0 6714 183 29 1 chr10 41145044 41146214 -104443074 + MSTB-int LTR MaLR 3 1205 -446 1467 236 56 23 chr10 41146228 41146898 -104442390 + L1MB5 LINE L1 1515 2318 -4064 2119 124 131 31 chr10 41146898 41146938 -104442350 - MSTA LTR MaLR -1 427 392 2072 118 20 10 chr10 41146938 41147234 -104442054 + AluSx SINE Alu 1 299 -13 2119 124 131 31 chr10 41147234 41147581 -104441707 - MSTA LTR MaLR -36 392 1 1467 236 56 23 chr10 41147581 41147863 -104441425 + L1MB5 LINE L1 2318 2589 -3793 * 2977 223 71 19 chr10 41147847 41148215 -104441073 + L1MB5 LINE L1 4723 5070 -1312 1676 180 44 3 chr10 41148215 41148509 -104440779 - AluJb SINE Alu -6 306 1 2977 223 71 19 chr10 41148509 41148876 -104440412 + L1MB5 LINE L1 5070 5417 -965 2019 139 0 0 chr10 41148876 41149157 -104440131 - AluSg SINE Alu -29 281 1 2274 111 3 0 chr10 41149159 41149456 -104439832 - AluSx SINE Alu -14 298 1 2977 223 71 19 chr10 41149456 41149545 -104439743 + L1MB5 LINE L1 5417 5594 -788 1124 229 87 0 chr10 41149547 41149765 -104439523 - MER8 DNA MER2_type 0 239 3 3943 174 51 20 chr10 41149801 41150585 -104438703 + L1MB5 LINE L1 5602 6409 -1 526 299 10 10 chr10 41150587 41150794 -104438494 + L1M4c LINE L1 3728 3934 -2448 653 254 90 11 chr10 41150794 41150983 -104438305 - MER63A DNA MER1_type 0 210 7 1571 236 19 3 chr10 41150989 41151362 -104437926 + L1M4c LINE L1 3934 4312 -2070 207 0 0 0 chr10 41151413 41151436 -104437852 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 429 332 105 9 chr10 41151438 41151703 -104437585 + L2 LINE L2 2777 3063 -250 22 0 0 0 chr10 41151804 41151826 -104437462 + AT_rich Low_complexity Low_complexity 1 22 0 2244 110 3 3 chr10 41151835 41152134 -104437154 + AluSx SINE Alu 1 299 -13 629 308 70 0 chr10 41152154 41152339 -104436949 - Charlie1a DNA MER1_type -1257 198 1 387 0 0 0 chr10 41152432 41152475 -104436813 + (CA)n Simple_repeat Simple_repeat 2 44 0 309 205 79 39 chr10 41152827 41152954 -104436334 + L1ME LINE L1 5716 5847 -274 6320 148 26 9 chr10 41153504 41153687 -104435601 + L1MA4 LINE L1 4146 4324 -1976 2281 101 3 3 chr10 41153687 41153985 -104435303 + AluSp SINE Alu 1 298 -15 6320 148 26 9 chr10 41153985 41154135 -104435153 + L1MA4 LINE L1 4324 4470 -1830 1690 151 79 11 chr10 41154135 41154414 -104434874 + AluSx SINE Alu 1 298 -14 6320 148 26 9 chr10 41154414 41156200 -104433088 + L1MA4 LINE L1 4470 6297 -3 23 33 0 0 chr10 41157329 41157359 -104431929 + GC_rich Low_complexity Low_complexity 1 30 0 1556 186 62 3 chr10 41157983 41158306 -104430982 - MER2 DNA MER2_type -1 343 2 222 297 16 0 chr10 41158401 41158465 -104430823 + (CATA)n Simple_repeat Simple_repeat 1 65 0 2935 185 52 23 chr10 41158484 41159143 -104430145 - MER67C LTR ERV1 0 710 29 2187 114 0 10 chr10 41159143 41159441 -104429847 - AluSg1 SINE Alu -14 295 1 2935 185 52 23 chr10 41159441 41159469 -104429819 - MER67C LTR ERV1 -681 29 3 4542 137 27 21 chr10 41159604 41160378 -104428910 + MER4E LTR ERV1 1 779 0 2203 111 0 0 chr10 41160417 41160706 -104428582 + AluSc SINE Alu 1 289 -20 405 118 108 49 chr10 41160846 41160948 -104428340 + MER54A LTR ERVL 8 115 -786 2304 109 0 3 chr10 41161460 41161762 -104427526 - AluSq SINE Alu -12 301 1 1989 138 3 10 chr10 41161846 41162144 -104427144 - AluSx SINE Alu -16 296 1 1053 216 14 106 chr10 41162144 41162202 -104427086 - L1MC4 LINE L1 -9 8033 7971 1945 146 43 0 chr10 41162202 41162483 -104426805 + AluSg SINE Alu 1 293 -17 1053 216 14 106 chr10 41162483 41162785 -104426503 - L1MC4 LINE L1 -71 7971 7713 1928 145 0 26 chr10 41162785 41163089 -104426199 - AluSc SINE Alu -13 296 1 1053 216 14 106 chr10 41163089 41163144 -104426144 - L1MC4 LINE L1 -329 7713 7655 1080 131 0 0 chr10 41163154 41163299 -104425989 + AluSq/x SINE Alu 1 145 -167 5197 55 132 169 chr10 41163299 41163874 -104425414 - MER11A LTR ERVK -1 1265 670 1316 14 0 0 chr10 41163874 41164018 -104425270 + AluYb8 SINE Alu 172 315 -3 5197 55 132 169 chr10 41164018 41164515 -104424773 - MER11A LTR ERVK -596 670 1 700 181 0 0 chr10 41164537 41164664 -104424624 + AluSg/x SINE Alu 182 308 -4 4063 222 75 38 chr10 41164664 41165404 -104423884 + L1MEc LINE L1 41 752 -5644 2158 112 10 0 chr10 41165404 41165698 -104423590 + AluSx SINE Alu 1 297 -15 4063 222 75 38 chr10 41165698 41165886 -104423402 + L1MEc LINE L1 752 931 -5465 2242 119 0 0 chr10 41165886 41166181 -104423107 - AluSg SINE Alu -15 295 1 4063 222 75 38 chr10 41166181 41166502 -104422786 + L1MEc LINE L1 931 1338 -5058 978 238 34 48 chr10 41166534 41166677 -104422611 + L1MEc LINE L1 2591 2735 -3480 2183 124 3 3 chr10 41166677 41166983 -104422305 + AluSp SINE Alu 1 306 -7 978 238 34 48 chr10 41166983 41167192 -104422096 + L1MEc LINE L1 2735 2938 -3277 388 219 9 9 chr10 41167202 41167316 -104421972 + CT-rich Low_complexity Low_complexity 1 114 0 1455 197 44 7 chr10 41167320 41167615 -104421673 - AluJo SINE Alu -2 310 5 1224 208 62 54 chr10 41167618 41167652 -104421636 + L1MEc LINE L1 2932 2964 -3251 1966 140 7 3 chr10 41167652 41167944 -104421344 + AluSg SINE Alu 1 293 -17 1224 208 62 54 chr10 41167944 41168343 -104420945 + L1MEc LINE L1 2964 3372 -2843 2344 108 0 0 chr10 41168343 41168648 -104420640 + AluSg SINE Alu 6 310 0 1224 208 62 54 chr10 41168648 41168679 -104420609 + L1MEc LINE L1 3372 3401 -2814 1120 90 0 0 chr10 41168685 41168819 -104420469 + AluSq/x SINE Alu 1 134 -179 497 206 10 0 chr10 41168821 41168923 -104420365 + L1MEc LINE L1 4133 4235 -1980 2325 108 13 0 chr10 41168926 41169232 -104420056 + AluSg SINE Alu 1 310 0 1800 134 47 30 chr10 41169248 41169546 -104419742 + AluSx SINE Alu 1 303 -9 317 280 75 0 chr10 41169550 41169657 -104419631 + L1M4b LINE L1 8 122 -6737 2230 111 3 0 chr10 41169669 41169967 -104419321 - AluSp SINE Alu -14 299 1 1293 214 51 11 chr10 41170624 41170899 -104418389 + AluJo SINE Alu 1 286 -26 2163 108 3 0 chr10 41171012 41171322 -104417966 - AluSp SINE Alu 0 311 1 21 0 0 0 chr10 41171325 41171346 -104417942 + AT_rich Low_complexity Low_complexity 1 21 0 1640 164 30 23 chr10 41171649 41171811 -104417477 - AluJb SINE Alu -6 306 140 2015 124 21 3 chr10 41171811 41172102 -104417186 - AluSx SINE Alu -16 296 1 1640 164 30 23 chr10 41172102 41172243 -104417045 - AluJb SINE Alu -172 140 1 1574 80 0 10 chr10 41172320 41172519 -104416769 - MER107 DNA MER1_type 0 197 1 1791 179 67 8 chr10 41172567 41172925 -104416363 - MLT1B LTR MaLR -11 379 1 876 242 64 64 chr10 41173946 41174013 -104415275 - L1MEc LINE L1 -6002 394 328 1914 166 3 3 chr10 41174013 41174321 -104414967 - AluSx SINE Alu -4 308 1 876 242 64 64 chr10 41174321 41174612 -104414676 - L1MEc LINE L1 -6067 329 36 243 277 119 10 chr10 41175423 41175524 -104413764 + MIR SINE MIR 40 151 -57 520 168 196 0 chr10 41175530 41175637 -104413651 + MLT2B2 LTR ERVL 1 128 -387 993 117 94 103 chr10 41175638 41175664 -104413624 + L1PB4 LINE L1 5460 5485 -671 855 99 0 0 chr10 41175664 41175775 -104413513 + HY1 scRNA scRNA 1 111 -1 993 117 94 103 chr10 41175775 41175971 -104413317 + L1PB4 LINE L1 5485 5680 -476 1175 149 0 16 chr10 41175972 41176160 -104413128 + AluSg SINE Alu 1 185 -125 418 103 162 0 chr10 41176161 41176229 -104413059 + AluY SINE Alu 54 132 -179 42708 38 24 4 chr10 41176245 41182253 -104407035 + L1PA2 LINE L1 3 6140 -15 1191 136 0 0 chr10 41182256 41182433 -104406855 + AluSg/x SINE Alu 121 297 -15 1774 173 0 0 chr10 41182435 41182724 -104406564 + AluJo SINE Alu 12 300 -12 2363 200 30 2 chr10 41182725 41183185 -104406103 + L1PB4 LINE L1 5684 6156 0 587 190 37 188 chr10 41183265 41183586 -104405702 + MLT2B1 LTR ERVL 100 480 -40 213 94 0 0 chr10 41183618 41183650 -104405638 + (CA)n Simple_repeat Simple_repeat 2 33 0 1478 175 38 55 chr10 41183825 41184225 -104405063 - HERV15 LTR ERV1 -8340 395 3 638 235 51 77 chr10 41184227 41184659 -104404629 - LTR15 LTR ERV1 0 493 112 671 86 0 0 chr10 41184748 41184829 -104404459 + AluSc SINE Alu 213 293 -16 593 160 50 8 chr10 41184841 41184960 -104404328 - L1MB7 LINE L1 -20 6164 6041 517 290 147 13 chr10 41185105 41185419 -104403869 + LTR50 LTR ERVL 437 792 -3 26 30 0 0 chr10 41185443 41185476 -104403812 + AT_rich Low_complexity Low_complexity 1 33 0 4904 164 15 35 chr10 41185527 41185779 -104403509 + L1MA5 LINE L1 4869 5124 -1176 2041 114 4 4 chr10 41185779 41186097 -104403191 + AluY SINE Alu 1 318 0 1847 131 77 0 chr10 41186107 41186214 -104403074 + AluSc SINE Alu 1 98 -211 351 0 0 0 chr10 41186214 41186253 -104403035 + (CA)n Simple_repeat Simple_repeat 2 40 0 1847 131 77 0 chr10 41186253 41186419 -104402869 + AluSc SINE Alu 98 295 -14 1765 170 3 0 chr10 41186428 41186737 -104402551 + AluJb SINE Alu 1 310 0 4904 164 15 35 chr10 41186737 41187783 -104401505 + L1MA5 LINE L1 5141 6300 0 2388 97 0 3 chr10 41187867 41188177 -104401111 + AluSp SINE Alu 1 309 -4 2144 183 96 30 chr10 41188188 41188657 -104400631 + MLT2B1 LTR ERVL 21 520 0 346 265 20 0 chr10 41188747 41188849 -104400439 + L1ME1 LINE L1 5709 5812 -2183 1910 192 139 22 chr10 41188849 41189339 -104399949 + LTR10B LTR ERV1 1 547 0 1132 238 48 18 chr10 41189339 41189690 -104399598 + L1ME1 LINE L1 5809 6165 -1 2277 106 0 3 chr10 41189737 41190040 -104399248 - AluSc SINE Alu -7 302 1 1620 156 28 21 chr10 41190175 41190463 -104398825 - AluJb SINE Alu -22 290 1 2233 81 34 0 chr10 41192104 41192399 -104396889 + AluSq SINE Alu 1 305 -8 201 239 183 14 chr10 41192466 41192537 -104396751 - MIR SINE MIR -105 103 21 2109 136 0 0 chr10 41193223 41193533 -104395755 - AluSx SINE Alu -2 310 1 2317 95 0 0 chr10 41193916 41194210 -104395078 - AluSc SINE Alu -15 294 1 1772 98 7 102 chr10 41194226 41194531 -104394757 - AluSg SINE Alu -8 302 27 237 305 38 15 chr10 41194594 41194725 -104394563 - L1ME3 LINE L1 -40 6122 5989 469 219 26 123 chr10 41194729 41194837 -104394451 + MER58B DNA MER1_type 201 291 -2129 2008 120 37 0 chr10 41194837 41195137 -104394151 - AluSx SINE Alu -1 311 1 469 219 26 123 chr10 41195137 41195183 -104394105 + MER58B DNA MER1_type 291 340 -1 441 282 201 6 chr10 41195339 41195687 -104393601 - L1M4 LINE L1 -1174 4972 4557 1972 124 43 7 chr10 41195694 41195976 -104393312 - AluSq SINE Alu -21 292 1 1890 114 0 52 chr10 41196114 41196422 -104392866 - AluSq SINE Alu -21 292 1 2041 133 23 0 chr10 41198620 41198922 -104390366 + AluSx SINE Alu 1 309 -3 189 74 0 0 chr10 41198944 41198971 -104390317 + (TATATG)n Simple_repeat Simple_repeat 2 28 0 646 324 108 6 chr10 41198982 41199521 -104389767 - L2 LINE L2 -172 3141 2541 1437 238 114 24 chr10 41199536 41199746 -104389542 + L1M4c LINE L1 1228 1418 -4964 4204 48 2 10 chr10 41199746 41200285 -104389003 - L1PA4 LINE L1 0 6155 5657 1437 238 114 24 chr10 41200285 41200672 -104388616 + L1M4c LINE L1 1418 1998 -4384 1005 209 223 0 chr10 41200677 41201027 -104388261 + L1M4c LINE L1 2034 2461 -3921 4361 111 82 20 chr10 41201031 41201722 -104387566 - L1MA2 LINE L1 0 6304 5571 768 186 6 25 chr10 41201722 41201883 -104387405 - L1M1 LINE L1 -7389 176 19 5927 229 87 65 chr10 41201914 41202223 -104387065 + L1M4c LINE L1 2485 2786 -3596 1506 154 30 0 chr10 41202223 41202456 -104386832 + AluSg SINE Alu 62 301 -9 5927 229 87 65 chr10 41202456 41203176 -104386112 + L1M4c LINE L1 2786 3489 -2893 2174 128 0 3 chr10 41203176 41203480 -104385808 + AluSx SINE Alu 1 303 -9 5927 229 87 65 chr10 41203480 41203746 -104385542 + L1M4c LINE L1 3489 3748 -2634 2100 127 0 7 chr10 41203746 41204045 -104385243 - AluSg SINE Alu -13 297 1 5927 229 87 65 chr10 41204045 41204678 -104384610 + L1M4c LINE L1 3748 4366 -2016 2265 105 23 0 chr10 41204678 41204983 -104384305 + AluSp SINE Alu 1 312 -1 5927 229 87 65 chr10 41204983 41205478 -104383810 + L1M4c LINE L1 4366 4849 -1533 2970 179 62 2 chr10 41205478 41205997 -104383291 + MER44D DNA MER2_type 1 605 0 5927 229 87 65 chr10 41205997 41206121 -104383167 + L1M4c LINE L1 4849 4969 -1413 1475 192 40 51 chr10 41206121 41206496 -104382792 + MLT1A2 LTR MaLR 4 374 0 5927 229 87 65 chr10 41206496 41206563 -104382725 + L1M4c LINE L1 4969 5160 -1222 1951 218 138 7 chr10 41206578 41207115 -104382173 - L1MB4 LINE L1 -2 6676 6070 198 0 0 0 chr10 41207122 41207144 -104382144 + (TAGA)n Simple_repeat Simple_repeat 1 22 0 2160 108 18 0 chr10 41207145 41207431 -104381857 - AluSx SINE Alu -21 291 1 365 204 108 0 chr10 41207438 41207531 -104381757 - L1MB4 LINE L1 -1014 5630 5528 231 174 0 130 chr10 41207532 41207601 -104381687 - L1MB4 LINE L1 -1181 5463 5404 571 240 39 7 chr10 41207605 41207759 -104381529 - L1MB5 LINE L1 -119 6055 5897 854 213 45 5 chr10 41207772 41207974 -104381314 - L1MB4 LINE L1 -1241 5403 5194 204 40 0 0 chr10 41208128 41208153 -104381135 + (TTCA)n Simple_repeat Simple_repeat 3 27 0 1339 192 65 41 chr10 41208157 41208448 -104380840 - AluJb SINE Alu -4 298 1 1550 253 25 38 chr10 41208450 41208809 -104380479 - L1MB4 LINE L1 -3601 3043 2681 1556 159 50 4 chr10 41208809 41209067 -104380221 + AluJo SINE Alu 11 280 -32 222 0 79 0 chr10 41209067 41209105 -104380183 + A-rich Low_complexity Low_complexity 1 41 0 1550 253 25 38 chr10 41209105 41209254 -104380034 - L1MB4 LINE L1 -3962 2682 2533 2047 143 0 13 chr10 41209254 41209568 -104379720 - AluSx SINE Alu 0 312 3 1550 253 25 38 chr10 41209568 41210244 -104379044 - L1MB4 LINE L1 -4111 2533 1764 381 261 114 23 chr10 41210244 41210420 -104378868 - L1MB4 LINE L1 -6336 206 15 309 162 27 14 chr10 41210463 41210537 -104378751 + L1M4 LINE L1 1373 1447 -5412 671 243 73 15 chr10 41210597 41210856 -104378432 + L1M4 LINE L1 1740 2013 -4946 3136 209 79 28 chr10 41210892 41211295 -104377993 + L1MD2 LINE L1 5479 5860 -499 959 247 101 45 chr10 41211295 41211692 -104377596 - LTR52 LTR ERVL -2 419 1 3136 209 79 28 chr10 41211692 41212089 -104377199 + L1MD2 LINE L1 5860 6325 -34 2219 135 0 0 chr10 41212089 41212401 -104376887 + AluJb SINE Alu 1 312 0 3136 209 79 28 chr10 41212401 41212426 -104376862 + L1MD2 LINE L1 6325 6347 -12 2129 93 4 4 chr10 41212484 41212788 -104376500 + AluSc SINE Alu 1 304 0 227 319 83 43 chr10 41212859 41213113 -104376175 + L1M4 LINE L1 4898 5161 -1796 3108 216 28 45 chr10 41213144 41213245 -104376043 - L1MB8 LINE L1 -13 6165 6064 1668 108 62 88 chr10 41213245 41213552 -104375736 - AluSx SINE Alu -13 299 1 2151 111 3 3 chr10 41213560 41213849 -104375439 - AluSx SINE Alu -23 289 1 3108 216 28 45 chr10 41213849 41214513 -104374775 - L1MB8 LINE L1 -121 6057 5403 2217 104 0 3 chr10 41214513 41214812 -104374476 - AluSg1 SINE Alu -11 298 1 3108 216 28 45 chr10 41214812 41214864 -104374424 - L1MB8 LINE L1 -775 5403 5352 2895 184 53 9 chr10 41214885 41215490 -104373798 - L1MC4 LINE L1 -16 8026 7124 2685 176 72 57 chr10 41215505 41215909 -104373379 - L1MC3 LINE L1 -922 6863 6443 2116 145 0 0 chr10 41215909 41216219 -104373069 - AluSx SINE Alu -2 310 1 2685 176 72 57 chr10 41216219 41216497 -104372791 - L1MC3 LINE L1 -1342 6443 6171 2324 256 91 40 chr10 41216507 41216959 -104372329 + L1M4 LINE L1 3383 3810 -2336 1997 145 10 3 chr10 41216959 41217262 -104372026 + AluSx SINE Alu 1 305 -7 2324 256 91 40 chr10 41217262 41217707 -104371581 + L1M4 LINE L1 3810 4326 -1820 * 5203 256 89 26 chr10 41217701 41218123 -104371165 - L1MB8 LINE L1 -808 5338 4944 2049 133 13 7 chr10 41218123 41218425 -104370863 - AluSg SINE Alu -6 304 1 5203 256 89 26 chr10 41218425 41218927 -104370361 - L1MB8 LINE L1 -1202 4944 4475 1447 156 120 18 chr10 41218927 41219203 -104370085 - AluSg SINE Alu -6 304 1 5203 256 89 26 chr10 41219203 41220016 -104369272 - L1MB8 LINE L1 -1671 4475 3715 1881 156 7 16 chr10 41220016 41220324 -104368964 - AluJb SINE Alu -3 309 5 5203 256 89 26 chr10 41220324 41221562 -104367726 - L1MB8 LINE L1 -2431 3715 2169 308 218 0 0 chr10 41221601 41221656 -104367632 + Tigger5 DNA MER2_type 1 55 -2268 229 227 15 15 chr10 41221625 41221691 -104367597 + Tigger5 DNA MER2_type 2251 2316 -7 * 328 185 15 15 chr10 41221758 41221823 -104367465 + Tigger5 DNA MER2_type 2259 2323 0 1025 191 80 0 chr10 41221925 41222124 -104367164 - L1PB4 LINE L1 0 6156 5942 29 47 0 0 chr10 41222129 41222172 -104367116 + AT_rich Low_complexity Low_complexity 1 43 0 391 227 60 117 chr10 41222177 41222380 -104366908 - L1MEc LINE L1 -4305 2091 1878 1377 138 47 30 chr10 41222380 41222612 -104366676 + MER46A DNA MER2_type 1 236 0 391 227 60 117 chr10 41222612 41222643 -104366645 - L1MEc LINE L1 -4518 1878 1847 180 0 0 0 chr10 41222643 41222663 -104366625 + (TTG)n Simple_repeat Simple_repeat 2 21 0 976 144 88 6 chr10 41222665 41222825 -104366463 - L1PA8A LINE L1 -13 6118 5946 391 227 60 117 chr10 41222825 41222970 -104366318 - L1MEc LINE L1 -4550 1846 1730 2113 106 27 3 chr10 41222991 41223283 -104366005 - AluSx SINE Alu -13 299 1 231 222 0 0 chr10 41223289 41223343 -104365945 + T-rich Low_complexity Low_complexity 1 54 0 1567 195 17 23 chr10 41223352 41223654 -104365634 - AluJb SINE Alu -12 300 1 320 328 85 10 chr10 41223654 41223949 -104365339 - L1M4b LINE L1 -4455 2683 2265 2551 47 3 0 chr10 41224011 41224309 -104364979 + L1PA4 LINE L1 5854 6152 -3 186 296 111 25 chr10 41224321 41224402 -104364886 + MIR SINE MIR 78 165 -97 516 192 48 41 chr10 41224489 41224635 -104364653 - L1M4b LINE L1 -4784 2175 2029 491 198 42 0 chr10 41224680 41224776 -104364512 - U6 snRNA snRNA -6 101 2 2424 236 67 13 chr10 41224778 41224996 -104364292 - L1M4b LINE L1 -4954 1901 1696 2204 121 0 6 chr10 41224996 41225311 -104363977 - AluSq SINE Alu 0 313 1 2424 236 67 13 chr10 41225311 41225470 -104363818 - L1M4b LINE L1 -5159 1696 1547 2176 117 13 0 chr10 41225470 41225769 -104363519 - AluSx SINE Alu -9 303 1 2424 236 67 13 chr10 41225769 41226327 -104362961 - L1M4b LINE L1 -5308 1547 936 1643 268 94 13 chr10 41226445 41226987 -104362301 - L1M4b LINE L1 -5927 932 347 3268 269 68 48 chr10 41226987 41227704 -104361584 + L1MEc LINE L1 362 1063 -5333 1657 137 16 73 chr10 41227704 41228018 -104361270 + AluJb SINE Alu 13 308 -4 3268 269 68 48 chr10 41228018 41228149 -104361139 + L1MEc LINE L1 1063 1190 -5206 2420 81 7 0 chr10 41228149 41228456 -104360832 + AluSc SINE Alu 1 309 0 3268 269 68 48 chr10 41228456 41229207 -104360081 + L1MEc LINE L1 1190 1995 -4401 1781 256 79 40 chr10 41229242 41230056 -104359232 + L1MEc LINE L1 2200 3044 -3171 438 190 66 33 chr10 41230113 41230234 -104359054 - L1M4 LINE L1 -2988 3158 3034 276 206 33 76 chr10 41230244 41230428 -104358860 + (TATATG)n Simple_repeat Simple_repeat 4 179 0 1115 268 73 14 chr10 41230449 41231172 -104358116 + L1MEc LINE L1 3101 3936 -2279 833 241 20 30 chr10 41231174 41231377 -104357911 + MER45R DNA AcHobo 4 204 -1377 4437 192 93 40 chr10 41231441 41232641 -104356647 + MER45R DNA AcHobo 318 1581 0 1767 250 67 59 chr10 41232661 41233529 -104355759 + L1MEc LINE L1 3937 4811 -1404 31 26 0 0 chr10 41233770 41233808 -104355480 + AT_rich Low_complexity Low_complexity 1 38 0 1045 229 102 23 chr10 41233958 41234382 -104354906 - MLT1B LTR MaLR 0 390 1 191 35 0 35 chr10 41234979 41235008 -104354280 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 337 258 87 51 chr10 41237736 41237914 -104351374 - L1MD3 LINE L1 -12 7936 6153 243 88 0 0 chr10 41237914 41237948 -104351340 + (TG)n Simple_repeat Simple_repeat 1 34 0 365 262 57 8 chr10 41238333 41238455 -104350833 - Zaphod DNA AcHobo 0 4031 3904 3509 230 111 34 chr10 41238858 41239286 -104350002 + L1M4 LINE L1 3041 3435 -2711 2002 127 0 20 chr10 41239286 41239578 -104349710 + AluSg SINE Alu 1 286 -24 3509 230 111 34 chr10 41239578 41240344 -104348944 + L1M4 LINE L1 3435 4327 -1819 2389 173 69 32 chr10 41240329 41240833 -104348455 + L1MC2 LINE L1 5811 6333 -11 * 1801 262 39 0 chr10 41240995 41241484 -104347804 + LTR53 LTR ERVL 11 518 -1 256 111 0 44 chr10 41242414 41242455 -104346833 + MLT1A1 LTR MaLR 4 42 -386 240 128 106 21 chr10 41242455 41242502 -104346786 + AluSx SINE Alu 1 51 -249 1778 117 24 0 chr10 41242506 41242775 -104346513 + AluSx SINE Alu 27 301 0 907 197 11 115 chr10 41242783 41243156 -104346132 + MLT1A1 LTR MaLR 39 396 0 787 103 0 28 chr10 41243416 41243523 -104345765 + FRAM SINE Alu 54 157 -19 2607 71 0 0 chr10 41243523 41243834 -104345454 + AluY SINE Alu 1 311 0 186 43 0 0 chr10 41245868 41245891 -104343397 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1938 118 7 4 chr10 41245899 41246171 -104343117 - AluSx SINE Alu -39 273 1 1912 112 72 0 chr10 41246515 41246793 -104342495 - AluSq SINE Alu -15 298 1 1743 125 91 8 chr10 41247069 41247353 -104341935 - AluSg1 SINE Alu 0 309 1 2073 146 10 0 chr10 41247454 41247762 -104341526 + AluSx SINE Alu 1 311 -1 979 143 0 0 chr10 41248651 41248798 -104340490 + L1PA16 LINE L1 6011 6157 -9 24 0 0 0 chr10 41250844 41250868 -104338420 + AT_rich Low_complexity Low_complexity 1 24 0 2102 129 0 0 chr10 41250868 41251162 -104338126 - AluSx SINE Alu -18 294 1 231 226 43 0 chr10 41251312 41251366 -104337922 + MER5A DNA MER1_type 41 106 -82 1924 128 3 17 chr10 41251725 41251861 -104337427 + AluSx SINE Alu 1 137 -175 1929 114 8 0 chr10 41251861 41252123 -104337165 + AluSq SINE Alu 39 302 -11 1924 128 3 17 chr10 41252123 41252275 -104337013 + AluSx SINE Alu 137 285 -27 348 24 0 0 chr10 41252293 41252304 -104336984 + (TG)n Simple_repeat Simple_repeat 1 52 0 348 24 0 0 chr10 41252304 41252345 -104336943 + (TG)n Simple_repeat Simple_repeat 2 42 0 459 230 133 12 chr10 41252566 41252731 -104336557 - MLT1C LTR MaLR 0 467 283 3154 112 27 33 chr10 41253971 41254178 -104335110 + MER49 LTR ERV1 1 208 -715 2411 78 3 0 chr10 41254178 41254474 -104334814 + AluY SINE Alu 1 297 -14 3154 112 27 33 chr10 41254474 41254777 -104334511 + MER49 LTR ERV1 208 508 -415 683 218 83 10 chr10 41255047 41255240 -104334048 + L1MC2 LINE L1 6138 6344 0 337 332 80 36 chr10 41255886 41256136 -104333152 + MIR SINE MIR 1 261 -1 250 318 9 36 chr10 41256331 41256441 -104332847 - MIR SINE MIR -61 147 41 2593 162 31 0 chr10 41256715 41257129 -104332159 - MSTA LTR MaLR -1 427 1 9505 165 31 28 chr10 41257129 41258366 -104330922 - MSTA-int LTR MaLR 0 1651 406 1454 192 91 0 chr10 41258366 41258652 -104330636 - AluJb SINE Alu 0 312 1 9505 165 31 28 chr10 41258652 41259060 -104330228 - MSTA-int LTR MaLR -1245 406 1 266 128 0 0 chr10 41259060 41259099 -104330189 - MSTA LTR MaLR 0 428 390 2305 97 0 0 chr10 41259099 41259387 -104329901 + AluSg SINE Alu 1 288 -22 2069 153 114 0 chr10 41259432 41259792 -104329496 - MSTA LTR MaLR -27 401 1 412 138 0 53 chr10 41260051 41260145 -104329143 - LTR49-int LTR ERV1 -2782 3816 3728 613 51 39 13 chr10 41260214 41260292 -104328996 - MADE1 DNA Mariner 0 80 1 502 233 61 28 chr10 41260303 41260483 -104328805 - LTR49-int LTR ERV1 -2868 3730 3545 326 173 12 37 chr10 41260565 41260646 -104328642 - LTR49-int LTR ERV1 -4274 2484 2406 213 39 0 0 chr10 41260677 41260703 -104328585 + (T)n Simple_repeat Simple_repeat 1 26 0 614 166 40 108 chr10 41261699 41261922 -104327366 - LTR49-int LTR ERV1 -2486 3845 3638 299 331 17 6 chr10 41261976 41262151 -104327137 - L1M4 LINE L1 -2396 3750 3574 495 287 96 56 chr10 41262161 41262662 -104326626 - HSATI Satellite Satellite -13 564 44 32 26 0 0 chr10 41262880 41262919 -104326369 + AT_rich Low_complexity Low_complexity 1 39 0 373 141 113 0 chr10 41263147 41263218 -104326070 + MSTD LTR MaLR 316 394 -2 3827 45 5 1 chr10 41263225 41263738 -104325550 + L1PA4 LINE L1 5608 6128 -27 207 0 0 0 chr10 41264173 41264196 -104325092 + (TG)n Simple_repeat Simple_repeat 2 24 0 185 278 42 0 chr10 41264476 41264548 -104324740 + MIR SINE MIR 178 252 -10 600 290 67 9 chr10 41264733 41265236 -104324052 - MLT1G LTR MaLR -29 561 1 1030 145 38 0 chr10 41265272 41265431 -104323857 - L1PA12 LINE L1 -5468 2113 1949 1680 107 25 0 chr10 41265431 41265674 -104323614 + L1PA13 LINE L1 5915 6163 0 5948 117 34 28 chr10 41265932 41265954 -104323334 - MER49 LTR ERV1 -4 919 899 2403 96 0 0 chr10 41265954 41266257 -104323031 + AluSq SINE Alu 1 303 -10 5948 117 34 28 chr10 41266257 41267148 -104322140 - MER49 LTR ERV1 -24 899 1 2429 195 60 39 chr10 41267475 41268120 -104321168 - HERVL68 LTR ERVL -1785 1252 594 293 291 0 58 chr10 41268270 41268356 -104320932 - HERVL68 LTR ERVL -2611 426 346 1584 155 7 69 chr10 41268392 41268683 -104320605 + AluJo SINE Alu 1 273 -39 2044 217 100 14 chr10 41268697 41269221 -104320067 - MER68 LTR ERV1 0 562 11 2050 128 3 13 chr10 41269233 41269537 -104319751 - AluSc SINE Alu -8 301 1 2075 125 7 10 chr10 41269937 41270241 -104319047 + AluSx SINE Alu 1 303 -9 1513 154 135 0 chr10 41271552 41271818 -104317470 + AluSx SINE Alu 1 302 -10 2007 145 0 3 chr10 41273048 41273351 -104315937 + AluSx SINE Alu 1 302 -10 2406 89 0 0 chr10 41273403 41273707 -104315581 + AluSg SINE Alu 1 304 -6 24 0 0 0 chr10 41273926 41273950 -104315338 + AT_rich Low_complexity Low_complexity 1 24 0 1546 127 14 40 chr10 41273957 41274073 -104315215 - L1PB3 LINE L1 -9 6145 6028 2119 124 10 0 chr10 41274073 41274372 -104314916 - AluSq SINE Alu -11 302 1 1546 127 14 40 chr10 41274372 41274530 -104314758 - L1PB3 LINE L1 -126 6028 5878 1846 108 87 17 chr10 41276706 41276994 -104312294 + AluSg SINE Alu 1 308 -2 1207 221 111 3 chr10 41277542 41277849 -104311439 + MER58B DNA MER1_type 2 341 0 2426 82 0 19 chr10 41278099 41278415 -104310873 + AluSg SINE Alu 1 310 0 2778 164 26 56 chr10 41278582 41279204 -104310084 - L1MB5 LINE L1 -6 6168 5566 609 202 85 48 chr10 41279206 41279478 -104309810 - L1MB5 LINE L1 -1475 4671 4390 758 194 31 6 chr10 41279478 41279638 -104309650 + MER58B DNA MER1_type 139 302 -39 843 240 52 0 chr10 41279641 41279928 -104309360 - L1MB5 LINE L1 -1745 4401 4081 4028 189 36 24 chr10 41279951 41280735 -104308553 - L1MB2 LINE L1 -42 6627 5675 8023 72 11 5 chr10 41280735 41281799 -104307489 - MER11C LTR ERVK 0 1071 1 4028 189 36 24 chr10 41281799 41282363 -104306925 - L1MB2 LINE L1 -994 5675 5119 3190 240 62 48 chr10 41282362 41282614 -104306674 - L1MB2 LINE L1 -3706 2938 2691 * 2194 109 0 43 chr10 41282614 41282936 -104306352 - AluSg SINE Alu -2 308 1 3190 240 62 48 chr10 41282936 41285143 -104304145 - L1MB2 LINE L1 -3953 2691 330 1408 210 100 19 chr10 41285350 41285779 -104303509 - L1MC4 LINE L1 -1115 6927 6464 2411 99 3 0 chr10 41285802 41286106 -104303182 - AluSp SINE Alu -8 305 1 594 174 65 14 chr10 41286395 41286533 -104302755 - MLT1A1 LTR MaLR -220 145 1 1175 235 60 22 chr10 41286533 41286950 -104302338 - L1M4 LINE L1 -1729 4915 4483 * 28356 95 9 10 chr10 41286943 41292296 -104296992 + L1PA7 LINE L1 1445 7592 0 397 133 53 0 chr10 41292299 41292374 -104296914 - L1MA3 LINE L1 -195 6110 6032 916 207 64 0 chr10 41292508 41292711 -104296577 - L1M4 LINE L1 -4631 2015 1800 752 64 0 0 chr10 41292716 41292810 -104296478 - AluY SINE Alu -16 295 202 255 223 32 21 chr10 41292828 41292922 -104296366 - L1M4 LINE L1 -5628 914 820 547 270 43 33 chr10 41292959 41293170 -104296118 - L1M4 LINE L1 -5719 823 611 827 68 83 30 chr10 41293174 41293306 -104295982 - MER85 DNA T2_type 0 139 1 710 31 21 0 chr10 41293532 41293628 -104295660 + (TTTTC)n Simple_repeat Simple_repeat 3 100 0 2105 108 7 0 chr10 41293629 41293907 -104295381 - AluSq SINE Alu -33 280 1 1663 147 0 0 chr10 41294007 41294252 -104295036 - AluSx SINE Alu -5 307 63 391 174 35 0 chr10 41294734 41294820 -104294468 + Charlie7 DNA MER1_type 51 139 -2473 28 29 0 0 chr10 41294832 41294867 -104294421 + AT_rich Low_complexity Low_complexity 1 35 0 450 0 0 0 chr10 41295868 41295918 -104293370 + (TG)n Simple_repeat Simple_repeat 2 51 0 300 242 0 78 chr10 41296338 41296466 -104292822 - L1ME3 LINE L1 -55 6107 5990 1449 178 13 80 chr10 41296570 41296884 -104292404 + AluJb SINE Alu 3 295 -17 1963 174 0 0 chr10 41297628 41297915 -104291373 + AluSx SINE Alu 1 287 -25 180 0 0 0 chr10 41297915 41297935 -104291353 + (CCA)n Simple_repeat Simple_repeat 1 20 0 2059 144 20 0 chr10 41300948 41301247 -104288041 + AluSx SINE Alu 1 305 -7 628 231 62 25 chr10 41301837 41302079 -104287209 + L1 LINE L1 3490 3740 -2406 836 240 218 3 chr10 41302385 41302756 -104286532 + L1MC4 LINE L1 6463 6913 -1129 1858 175 7 7 chr10 41302757 41303060 -104286228 + AluJb SINE Alu 1 303 -9 256 145 65 16 chr10 41303060 41303122 -104286166 + L1MC/D LINE L1 5744 5808 -525 * 2873 175 36 2 chr10 41303110 41303723 -104285565 + L1 LINE L1 4610 5243 -903 1331 163 55 4 chr10 41303723 41303980 -104285308 - MSTA LTR MaLR 0 428 159 790 83 16 0 chr10 41303994 41304115 -104285173 + L1MA3 LINE L1 6183 6305 0 558 225 31 8 chr10 41304263 41304392 -104284896 - MSTA LTR MaLR -294 132 1 5887 95 65 7 chr10 41304407 41305401 -104283887 + L1MA3 LINE L1 5254 6305 0 471 196 14 161 chr10 41305826 41306106 -104283182 + L1M4 LINE L1 4999 5237 -909 1241 144 118 146 chr10 41306477 41306551 -104282737 + LOR1a LTR ERV1 1 76 -421 1672 143 156 45 chr10 41306551 41306930 -104282358 - MSTA LTR MaLR -4 424 4 1241 144 118 146 chr10 41306930 41307347 -104281941 + LOR1a LTR ERV1 76 478 -19 2310 90 0 0 chr10 41309564 41309853 -104279435 - AluSg SINE Alu -21 289 1 352 77 0 0 chr10 41310072 41310124 -104279164 + Alu SINE Alu 246 297 -3 535 108 11 0 chr10 41310130 41310223 -104279065 - L1PA15 LINE L1 -1 6164 6071 836 97 8 0 chr10 41310225 41310349 -104278939 - L1PA15 LINE L1 -159 6006 5882 450 46 31 0 chr10 41310363 41310428 -104278860 + MER41A LTR ERV1 400 466 -88 4566 237 54 16 chr10 41310670 41311257 -104278031 - L1MB4 LINE L1 -3 6413 5850 2034 143 0 29 chr10 41311257 41311571 -104277717 - AluSx SINE Alu -7 305 1 4566 237 54 16 chr10 41311571 41313347 -104275941 - L1MB4 LINE L1 -566 5850 3946 1145 171 46 0 chr10 41313347 41313587 -104275701 + Tigger5 DNA MER2_type 2073 2323 0 1039 267 37 23 chr10 41313587 41314104 -104275184 - L1MB4 LINE L1 -3512 2870 2347 4798 58 2 3 chr10 41314116 41314717 -104274571 - L1PA5 LINE L1 -1 6153 5554 6153 112 0 11 chr10 41314717 41315670 -104273618 - L1P LINE L1 -4627 1519 578 4243 237 107 28 chr10 41315665 41315906 -104273382 - L1MB4 LINE L1 -4029 2355 2134 * 2311 104 0 3 chr10 41315906 41316203 -104273085 + AluSc SINE Alu 1 296 -13 4243 237 107 28 chr10 41316203 41316389 -104272899 - L1MB4 LINE L1 -4250 2134 1964 1962 123 70 25 chr10 41316389 41316748 -104272540 - THE1C LTR MaLR 0 375 1 4243 237 107 28 chr10 41316748 41316948 -104272340 - L1MB4 LINE L1 -4420 1964 1781 1905 137 0 36 chr10 41316948 41317255 -104272033 - AluSq SINE Alu -17 296 1 4243 237 107 28 chr10 41317255 41318709 -104270579 - L1MB4 LINE L1 -4603 1781 16 200 317 135 0 chr10 41319618 41319722 -104269566 + MIR3 SINE MIR 63 180 -28 2262 113 0 0 chr10 41320174 41320467 -104268821 - AluSc SINE Alu -16 293 1 1818 234 111 96 chr10 41321029 41321944 -104267344 + L1MD3 LINE L1 6272 7461 -532 548 236 0 0 chr10 41321944 41322067 -104267221 + MLT1F1 LTR MaLR 3 125 -442 1818 234 111 96 chr10 41322067 41322609 -104266679 + L1MD3 LINE L1 7461 7993 0 1818 150 0 0 chr10 41322629 41322896 -104266392 + AluSx SINE Alu 1 267 -45 1094 231 117 2 chr10 41323459 41323871 -104265417 - L1MDa LINE L1 -4112 2428 1970 2112 134 0 10 chr10 41326616 41326923 -104262365 + AluSx SINE Alu 1 304 -8 549 140 32 0 chr10 41327075 41327168 -104262120 - AluSp/q SINE Alu -10 303 208 248 128 26 0 chr10 41327168 41327207 -104262081 - Alu SINE Alu -263 40 1 205 329 63 0 chr10 41327248 41327327 -104261961 - MIR3 SINE MIR -25 183 100 259 239 15 0 chr10 41327352 41327419 -104261869 + Tigger2 DNA MER2_type 3 70 -2648 558 269 11 44 chr10 41327453 41327576 -104261712 - MER8 DNA MER2_type -63 176 59 2077 172 64 40 chr10 41327576 41328075 -104261213 - MER9 LTR ERVK 0 511 1 558 269 11 44 chr10 41328075 41328133 -104261155 - MER8 DNA MER2_type -180 59 1 256 263 88 25 chr10 41328986 41329066 -104260222 - MIR3 SINE MIR -46 162 78 2081 154 0 0 chr10 41329641 41329939 -104259349 - AluSx SINE Alu -14 298 1 401 333 42 48 chr10 41330168 41330373 -104258915 + L2 LINE L2 2946 3150 -163 2290 88 0 16 chr10 41330373 41330678 -104258610 - AluY SINE Alu -9 302 3 401 333 42 48 chr10 41330678 41330802 -104258486 + L2 LINE L2 3150 3273 -40 997 177 60 41 chr10 41331354 41331620 -104257668 - MER92B LTR ERV1 -365 271 1 2155 118 0 3 chr10 41332031 41332374 -104256914 - AluSq SINE Alu 0 313 1 1719 200 7 0 chr10 41332488 41332798 -104256490 - AluSx SINE Alu 0 312 1 1382 97 0 78 chr10 41332946 41333152 -104256136 - AluSp SINE Alu -123 190 1 23 0 0 0 chr10 41333333 41333356 -104255932 + AT_rich Low_complexity Low_complexity 1 23 0 906 206 0 0 chr10 41333662 41333837 -104255451 + AluJb SINE Alu 137 311 -1 195 286 0 0 chr10 41335218 41335323 -104253965 + (TG)n Simple_repeat Simple_repeat 2 106 0 2369 89 0 6 chr10 41336013 41336327 -104252961 - AluSq SINE Alu 0 313 2 908 290 73 62 chr10 41336335 41337046 -104252242 + L1M4 LINE L1 3064 3782 -2364 423 286 32 7 chr10 41338716 41338870 -104250418 + MER58B DNA MER1_type 177 334 -7 1806 221 100 77 chr10 41339555 41340442 -104248846 - L1MC4a LINE L1 -1 7807 6900 1791 75 12 181 chr10 41340448 41340862 -104248426 - LTR14A LTR ERVK 0 344 1 1967 213 49 81 chr10 41340865 41341362 -104247926 - L1MC4a LINE L1 -909 6899 6428 216 0 0 0 chr10 41341362 41341386 -104247902 + (TG)n Simple_repeat Simple_repeat 2 25 0 1967 213 49 81 chr10 41341386 41341564 -104247724 - L1MC4a LINE L1 -1380 6428 6246 328 188 11 125 chr10 41341587 41341763 -104247525 - L1MC4a LINE L1 -1794 6014 5859 2309 116 0 3 chr10 41341923 41342234 -104247054 - AluSx SINE Alu -2 310 1 1595 143 4 15 chr10 41342597 41342856 -104246432 - AluSx SINE Alu -11 301 46 28 86 0 0 chr10 41343301 41343371 -104245917 + AT_rich Low_complexity Low_complexity 1 70 0 1018 247 86 47 chr10 41343793 41344352 -104244936 + L1MC5 LINE L1 6629 7215 -746 2715 128 40 5 chr10 41344354 41344800 -104244488 + MER4C LTR ERV1 1 462 -3 492 227 9 0 chr10 41344806 41344916 -104244372 + MSTD LTR MaLR 1 111 -285 682 235 31 0 chr10 41345127 41345289 -104243999 + MSTD LTR MaLR 216 382 -14 341 69 0 17 chr10 41345710 41345768 -104243520 + (TG)n Simple_repeat Simple_repeat 2 58 0 2285 121 0 0 chr10 41346196 41346509 -104242779 - AluSq SINE Alu 0 313 1 306 0 0 0 chr10 41346707 41346741 -104242547 + (TG)n Simple_repeat Simple_repeat 2 35 0 2399 208 61 41 chr10 41347720 41348457 -104240831 - L1MC1 LINE L1 0 6333 5582 647 196 0 38 chr10 41348511 41348644 -104240644 - AluJb SINE Alu -164 148 21 479 235 76 34 chr10 41351589 41351775 -104237513 + MLT1J LTR MaLR 60 300 -211 354 265 14 82 chr10 41351805 41351952 -104237336 + L2 LINE L2 3136 3272 0 2365 97 0 0 chr10 41352225 41352524 -104236764 + AluSg SINE Alu 1 299 -11 204 392 74 17 chr10 41353444 41353740 -104235548 + L2 LINE L2 1533 1845 -1469 295 291 81 0 chr10 41353857 41353943 -104235345 - L2 LINE L2 -24 3289 3197 1932 119 33 81 chr10 41355087 41355481 -104233807 + THE1C LTR MaLR 1 375 0 407 283 194 16 chr10 41355512 41355703 -104233585 + MIR SINE MIR 35 259 -3 1517 127 0 0 chr10 41357598 41357827 -104231461 + L1PA8 LINE L1 5937 6165 -7 707 173 0 58 chr10 41358418 41358557 -104230731 - FLAM_A SINE Alu -2 131 1 1928 186 70 15 chr10 41359525 41359922 -104229366 - MSTB LTR MaLR -7 419 1 310 194 56 0 chr10 41361173 41361245 -104228043 - HAL1 LINE L1 -335 2172 2097 435 348 26 49 chr10 41361522 41361789 -104227499 - HAL1 LINE L1 -548 1959 1699 648 272 181 53 chr10 41361835 41362309 -104226979 - HAL1 LINE L1 -904 1603 1069 328 209 164 18 chr10 41362313 41362423 -104226865 - HAL1 LINE L1 -1542 965 840 281 333 0 10 chr10 41362542 41362644 -104226644 - HAL1 LINE L1 -1832 675 575 1164 176 5 32 chr10 41363363 41363579 -104225709 + AluJo SINE Alu 87 296 -16 5343 155 34 9 chr10 41363702 41365352 -104223936 - L1PB1 LINE L1 -2 6149 4452 3092 204 1 8 chr10 41365345 41366051 -104223237 + L1PB1 LINE L1 3761 4461 -1685 * 19591 110 16 15 chr10 41368324 41373790 -104215498 + L1PA8 LINE L1 717 6168 -4 2147 125 3 0 chr10 41373796 41374114 -104215174 + AluSq SINE Alu 1 319 0 255 31 0 0 chr10 41374290 41374322 -104214966 + (CAA)n Simple_repeat Simple_repeat 1 32 0 582 251 39 45 chr10 41374846 41375025 -104214263 + MER5B DNA MER1_type 1 178 0 314 194 83 111 chr10 41375050 41375194 -104214094 + MIR3 SINE MIR 68 207 -1 22 0 0 0 chr10 41375593 41375615 -104213673 + AT_rich Low_complexity Low_complexity 1 22 0 1915 162 0 3 chr10 41375794 41376091 -104213197 + AluSx SINE Alu 1 296 -16 582 274 26 0 chr10 41376716 41376869 -104212419 - MER20 DNA MER1_type -3 216 60 1230 208 201 10 chr10 41376885 41377473 -104211815 - Charlie1 DNA MER1_type -181 2580 1881 1203 192 103 33 chr10 41377541 41377812 -104211476 - AluSq SINE Alu -23 290 1 1893 106 83 0 chr10 41378364 41378650 -104210638 - AluSq SINE Alu 0 308 1 2399 91 0 0 chr10 41378680 41378987 -104210301 - AluY SINE Alu 0 311 5 2303 106 0 7 chr10 41379314 41379617 -104209671 + AluSq SINE Alu 3 303 -10 285 291 35 0 chr10 41379667 41379753 -104209535 - MER3 DNA MER1_type -109 100 12 * 305 177 177 15 chr10 41379721 41379851 -104209437 + Charlie2 DNA MER1_type 2384 2534 -328 195 280 140 26 chr10 41381091 41381284 -104208004 - L2 LINE L2 -907 2407 2193 546 232 0 9 chr10 41381304 41381416 -104207872 + FLAM_A SINE Alu 1 111 -31 2181 91 0 0 chr10 41381416 41381738 -104207550 - AluY SINE Alu 0 327 6 1230 206 91 18 chr10 41381775 41382051 -104207237 + AluJo SINE Alu 1 296 -16 713 303 121 33 chr10 41382217 41382866 -104206422 - L2 LINE L2 -5 3308 2593 243 61 0 0 chr10 41383670 41383703 -104205585 + (T)n Simple_repeat Simple_repeat 1 33 0 9309 179 43 6 chr10 41383756 41385557 -104203731 + L1PB2 LINE L1 17 1884 -5681 2106 161 2 19 chr10 41385552 41385974 -104203314 + L1PB2 LINE L1 6018 6432 -1133 * 723 171 14 43 chr10 41385977 41386117 -104203171 + AluJ SINE Alu 1 136 -176 1305 211 37 6 chr10 41386118 41386468 -104202820 + L1PB2 LINE L1 6421 6781 -784 883 234 0 0 chr10 41386469 41386623 -104202665 + AluJ SINE Alu 133 286 -26 5127 117 34 25 chr10 41386625 41387214 -104202074 + L1MA3 LINE L1 5354 5957 -348 2246 112 0 0 chr10 41387214 41387519 -104201769 - AluSg SINE Alu -5 305 1 5127 117 34 25 chr10 41387519 41387865 -104201423 + L1MA3 LINE L1 5957 6298 -7 1911 159 80 1 chr10 41388573 41389072 -104200216 + L1PB2 LINE L1 6816 7366 -204 216 97 0 0 chr10 41389088 41389119 -104200169 + (CA)n Simple_repeat Simple_repeat 2 32 0 320 177 36 18 chr10 41389701 41389953 -104199335 + AluJb SINE Alu 2 306 0 2014 114 46 0 chr10 41392709 41392990 -104196298 + AluSg1 SINE Alu 1 294 -15 22 0 0 0 chr10 41394033 41394055 -104195233 + AT_rich Low_complexity Low_complexity 1 22 0 809 257 0 0 chr10 41394182 41394353 -104194935 - FAM SINE Alu -14 171 1 802 212 0 7 chr10 41394465 41394616 -104194672 + FAM SINE Alu 16 165 -20 270 85 0 0 chr10 41395328 41395375 -104193913 - AluSx SINE Alu 0 301 255 1144 135 6 6 chr10 41395375 41395545 -104193743 - AluSx SINE Alu -142 170 1 254 261 0 0 chr10 41396023 41396092 -104193196 - MER116 DNA Mariner -5 75 7 2293 111 0 0 chr10 41396739 41397036 -104192252 - AluSg SINE Alu -8 302 6 39740 62 4 1 chr10 41397070 41403202 -104186086 + L1PA5 LINE L1 1 6147 -7 195 280 27 27 chr10 41404240 41404315 -104184973 + MER5A DNA MER1_type 1 75 -114 706 229 109 5 chr10 41404315 41404516 -104184772 + L1MD3 LINE L1 7730 7951 -44 310 311 50 25 chr10 41404525 41404644 -104184644 + MER5A DNA MER1_type 55 176 -13 483 280 60 60 chr10 41404692 41404892 -104184396 - MIR SINE MIR -54 208 9 2325 72 0 31 chr10 41405051 41405372 -104183916 - AluY SINE Alu 0 311 1 192 284 42 74 chr10 41407173 41407268 -104182020 - L2 LINE L2 -81 3191 3100 263 27 0 27 chr10 41407615 41407652 -104181636 + (TTTTTA)n Simple_repeat Simple_repeat 4 39 0 279 0 0 0 chr10 41407839 41407870 -104181418 + (A)n Simple_repeat Simple_repeat 1 31 0 2204 119 3 0 chr10 41407931 41408234 -104181054 + AluSp SINE Alu 5 308 -5 1270 238 146 23 chr10 41408542 41409071 -104180217 - MER92B LTR ERV1 -10 626 33 487 263 47 32 chr10 41409095 41409285 -104180003 + MER21B LTR ERV1 408 600 -263 567 159 34 0 chr10 41409286 41409413 -104179875 + AluSc SINE Alu 191 320 0 4210 117 55 44 chr10 41409413 41410018 -104179270 - MER4B-int LTR ERV1 -4085 2513 2085 1921 149 7 0 chr10 41410018 41410306 -104178982 - AluSq SINE Alu -19 294 5 4210 117 55 44 chr10 41410306 41410941 -104178347 - MER4B-int LTR ERV1 -4513 2085 1458 2432 106 8 0 chr10 41410969 41411327 -104177961 - L1PB1 LINE L1 -3 6148 5788 3839 114 90 14 chr10 41411327 41411982 -104177306 + MER61-int LTR ERV1 4285 4989 -228 690 260 27 27 chr10 41412341 41412714 -104176574 - L1MEc LINE L1 -2715 3667 3295 2190 142 3 0 chr10 41412737 41413048 -104176240 - AluSx SINE Alu 0 312 1 897 272 33 22 chr10 41413057 41413425 -104175863 - L1MEc LINE L1 -3379 3003 2632 367 281 150 7 chr10 41413432 41413585 -104175703 - L1MEc LINE L1 -5026 1358 1184 856 255 101 34 chr10 41413591 41414006 -104175282 - L1MEc LINE L1 -5273 1290 848 527 95 0 0 chr10 41414006 41414080 -104175208 - FAM SINE Alu -8 177 104 872 283 63 24 chr10 41414134 41414548 -104174740 - L1MEc LINE L1 -5734 829 400 297 318 52 32 chr10 41414558 41414712 -104174576 - L2 LINE L2 -1034 2280 2124 223 326 45 45 chr10 41415132 41415264 -104174024 + MIR SINE MIR 26 157 -105 24 53 0 0 chr10 41415362 41415400 -104173888 + AT_rich Low_complexity Low_complexity 1 38 0 733 172 0 0 chr10 41415511 41415627 -104173661 - FLAM_C SINE Alu -27 116 1 24 67 0 0 chr10 41416288 41416333 -104172955 + AT_rich Low_complexity Low_complexity 1 45 0 262 282 194 8 chr10 41416727 41416975 -104172313 + L1ME4a LINE L1 5765 6058 -63 28 29 0 0 chr10 41417078 41417113 -104172175 + AT_rich Low_complexity Low_complexity 1 35 0 419 196 399 0 chr10 41417274 41417407 -104171881 + MER5A DNA MER1_type 4 189 0 649 291 72 25 chr10 41417633 41417870 -104171418 - MIR SINE MIR 0 262 15 6295 221 49 35 chr10 41417905 41419689 -104169599 + L1MA7 LINE L1 1 1758 -4592 2410 93 0 3 chr10 41419689 41419990 -104169298 + AluSq SINE Alu 1 300 -13 6295 221 49 35 chr10 41419990 41422923 -104166365 + L1MA7 LINE L1 1758 4429 -1921 865 218 75 93 chr10 41422923 41423384 -104165904 - MER66A LTR ERV1 -3 475 97 1347 136 68 19 chr10 41423440 41423750 -104165538 + L1MA7 LINE L1 4426 4750 -1600 448 207 78 0 chr10 41423743 41423859 -104165429 + L1 LINE L1 5223 5347 -799 * 4223 197 48 11 chr10 41423848 41425532 -104163756 + L1MA7 LINE L1 4739 6483 -12 2659 102 6 6 chr10 41425792 41426156 -104163132 - THE1B LTR MaLR 0 364 1 248 304 49 10 chr10 41426191 41426272 -104163016 - L2 LINE L2 -4 3309 3222 2135 120 16 13 chr10 41426272 41426581 -104162707 + AluSp SINE Alu 1 310 -3 248 304 49 10 chr10 41426581 41426601 -104162687 - L2 LINE L2 -91 3222 3204 237 65 0 0 chr10 41426993 41427024 -104162264 + (TG)n Simple_repeat Simple_repeat 2 32 0 1327 167 0 0 chr10 41427171 41427387 -104161901 - MLT1A1 LTR MaLR 0 365 150 952 219 0 0 chr10 41427387 41427556 -104161732 - FAM SINE Alu -13 172 4 2306 125 49 33 chr10 41427577 41427889 -104161399 + MER4B LTR ERV1 115 421 -358 2362 64 0 0 chr10 41427889 41428194 -104161094 - AluY SINE Alu 0 305 1 2306 125 49 33 chr10 41428194 41428370 -104160918 + MER4B LTR ERV1 421 779 0 2719 84 18 11 chr10 41429948 41430328 -104158960 + L1PA11 LINE L1 5792 6174 0 253 326 23 23 chr10 41431609 41431695 -104157593 + MIR SINE MIR 17 102 -160 2455 106 11 0 chr10 41431811 41432160 -104157128 + THE1A LTR MaLR 1 353 -2 2900 164 57 4 chr10 41432511 41433042 -104156246 - MER89 LTR ERV1 0 559 1 433 264 68 36 chr10 41435730 41435980 -104153308 - L1MC4 LINE L1 -1029 7013 6756 209 182 0 0 chr10 41436096 41436129 -104153159 + polypyrimidine Low_complexity Low_complexity 6 38 0 621 314 33 25 chr10 41436151 41436393 -104152895 + MIR SINE MIR 19 262 0 209 32 0 32 chr10 41437062 41437093 -104152195 + (TTCCC)n Simple_repeat Simple_repeat 5 34 0 816 154 19 6 chr10 41437283 41437445 -104151843 - MER89 LTR ERV1 -1 558 395 229 375 39 10 chr10 41437615 41437719 -104151569 + L2 LINE L2 3125 3231 -41 2179 122 0 0 chr10 41439309 41439603 -104149685 - AluSq SINE Alu -19 294 1 211 356 100 28 chr10 41439870 41440050 -104149238 + MIR SINE MIR 27 219 -43 588 284 107 50 chr10 41440468 41440926 -104148362 - L1MC4 LINE L1 -2000 5808 5325 221 325 223 6 chr10 41441577 41441743 -104147545 - MIR SINE MIR -1 261 60 387 210 98 128 chr10 41441751 41442306 -104146982 - MER34C LTR ERV1 -5 537 3 2580 138 34 15 chr10 41442813 41443073 -104146215 + L1MA4 LINE L1 5527 5801 -499 234 0 0 0 chr10 41443073 41443099 -104146189 + (TA)n Simple_repeat Simple_repeat 2 27 0 2580 138 34 15 chr10 41443099 41443303 -104145985 + L1MA4 LINE L1 5801 6000 -300 295 188 2 0 chr10 41443323 41443398 -104145890 + L1MB3 LINE L1 6079 6154 -17 7586 16 0 1 chr10 41443766 41445258 -104144030 - L1HS LINE L1 0 6155 4666 * 9903 24 0 0 chr10 41445256 41446466 -104142822 + L1HS LINE L1 3463 4672 -1474 5793 68 4 0 chr10 41447048 41447787 -104141501 + L1PA7 LINE L1 5402 6143 -11 217 390 48 0 chr10 41448456 41448561 -104140727 + L2 LINE L2 3138 3247 -25 308 345 35 7 chr10 41448733 41448875 -104140413 + MIR3 SINE MIR 60 205 -3 230 346 58 0 chr10 41449009 41449113 -104140175 - L2 LINE L2 0 3272 3163 189 372 47 40 chr10 41449551 41449699 -104139589 + MER5A DNA MER1_type 40 188 -1 398 329 32 0 chr10 41449741 41449896 -104139392 + MIR SINE MIR 54 213 -49 182 263 35 18 chr10 41449902 41449959 -104139329 + MER5B DNA MER1_type 11 68 -110 2129 128 3 6 chr10 41450373 41450686 -104138602 + AluSx SINE Alu 1 312 0 256 272 49 0 chr10 41451097 41451366 -104137922 + (TA)n Simple_repeat Simple_repeat 1 282 0 181 0 33 33 chr10 41451512 41451542 -104137746 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 1231 202 89 16 chr10 41451547 41451804 -104137484 - AluJo SINE Alu -33 279 4 1858 168 0 20 chr10 41452315 41452451 -104136837 + AluJb SINE Alu 6 143 -169 2256 104 17 0 chr10 41452451 41452750 -104136538 + AluY SINE Alu 2 305 -6 1858 168 0 20 chr10 41452750 41452911 -104136377 + AluJb SINE Alu 143 297 -15 258 247 81 65 chr10 41453352 41453451 -104135837 - MARNA DNA Mariner -253 333 228 1475 212 48 0 chr10 41453451 41453744 -104135544 + AluJo SINE Alu 1 307 -5 258 247 81 65 chr10 41453744 41453830 -104135458 - MARNA DNA Mariner -358 228 145 578 92 0 0 chr10 41454029 41454105 -104135183 + AluSc SINE Alu 197 272 -37 403 176 10 10 chr10 41454113 41454215 -104135073 + CT-rich Low_complexity Low_complexity 2 103 0 3059 177 21 59 chr10 41454457 41455174 -104134114 - LTR8 LTR ERV1 -1 690 1 425 239 192 0 chr10 41456511 41456641 -104132647 - L2 LINE L2 -1 3271 3117 260 172 0 16 chr10 41456652 41456703 -104132585 + (CATA)n Simple_repeat Simple_repeat 2 53 -11 1615 118 230 28 chr10 41456703 41457059 -104132229 - MSTA LTR MaLR 0 428 1 260 172 0 16 chr10 41457059 41457071 -104132217 + (CATA)n Simple_repeat Simple_repeat 53 64 0 311 316 164 34 chr10 41457075 41457344 -104131944 - L2 LINE L2 -150 3163 2860 2187 169 102 36 chr10 41457691 41457985 -104131303 - LTR49 LTR ERV1 0 595 322 2343 100 7 3 chr10 41457985 41458295 -104130993 + AluSq SINE Alu 1 311 -2 2187 169 102 36 chr10 41458295 41458558 -104130730 - LTR49 LTR ERV1 -273 322 1 798 171 40 29 chr10 41458695 41458870 -104130418 + MER5B DNA MER1_type 2 178 0 1975 169 64 114 chr10 41459466 41460165 -104129123 - MER4A LTR ERV1 0 664 1 720 136 16 16 chr10 41460822 41460947 -104128341 + FLAM_C SINE Alu 11 135 -8 26 62 0 15 chr10 41462192 41462215 -104127073 + AT_rich Low_complexity Low_complexity 1 23 -41 3100 90 26 21 chr10 41462215 41462282 -104127006 + L1PA13 LINE L1 5685 5750 -413 2200 125 0 0 chr10 41462282 41462579 -104126709 + AluSx SINE Alu 1 297 -15 3100 90 26 21 chr10 41462579 41462980 -104126308 + L1PA13 LINE L1 5750 6155 -8 26 62 0 15 chr10 41462980 41463021 -104126267 + AT_rich Low_complexity Low_complexity 23 64 0 789 285 65 8 chr10 41463401 41463647 -104125641 - MIR SINE MIR 0 262 3 528 232 116 0 chr10 41463831 41463943 -104125345 + FLAM_A SINE Alu 4 128 -5 319 258 113 21 chr10 41464099 41464196 -104125092 + L2 LINE L2 3157 3262 -10 361 303 9 0 chr10 41466457 41466566 -104122722 - MIR SINE MIR -1 261 152 360 295 75 62 chr10 41466595 41466822 -104122466 + L1M3c LINE L1 173 402 -5911 2419 210 93 7 chr10 41467235 41468016 -104121272 + L1M3c LINE L1 777 1787 -4516 225 325 100 0 chr10 41468016 41468094 -104121194 - MIR SINE MIR -160 102 17 621 143 9 54 chr10 41468094 41468206 -104121082 + MER5A DNA MER1_type 1 107 -82 646 247 57 71 chr10 41468327 41468663 -104120625 + MER46C DNA MER2_type 6 336 -2 244 296 105 26 chr10 41468675 41468827 -104120461 + MIR3 SINE MIR 21 184 -24 505 81 40 0 chr10 41468929 41469003 -104120285 + MADE1 DNA Mariner 3 79 -1 2164 108 48 0 chr10 41469914 41470209 -104119079 + AluSx SINE Alu 1 309 -3 1138 82 98 27 chr10 41470219 41470243 -104119045 - MER107 DNA MER1_type 0 197 176 234 0 0 0 chr10 41470243 41470269 -104119019 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1138 82 98 27 chr10 41470269 41470428 -104118860 - MER107 DNA MER1_type -21 176 1 24 32 0 0 chr10 41471060 41471091 -104118197 + AT_rich Low_complexity Low_complexity 1 31 0 266 333 194 7 chr10 41471124 41471268 -104118020 - MIR3 SINE MIR -27 181 11 293 301 38 53 chr10 41471983 41472116 -104117172 + MIR SINE MIR 22 152 -110 375 23 0 0 chr10 41472195 41472239 -104117049 + (CAT)n Simple_repeat Simple_repeat 2 45 0 309 26 0 0 chr10 41472770 41472808 -104116480 + (TG)n Simple_repeat Simple_repeat 2 39 0 1948 91 7 18 chr10 41473743 41474018 -104115270 + AluSc SINE Alu 34 305 -4 1713 172 0 7 chr10 41474448 41474738 -104114550 - AluJb SINE Alu -14 298 11 22 0 0 0 chr10 41475952 41475974 -104113314 + AT_rich Low_complexity Low_complexity 1 22 0 258 119 48 0 chr10 41476501 41476543 -104112745 + tRNA-Leu-CTG tRNA tRNA 1 44 -42 872 174 25 156 chr10 41476658 41476841 -104112447 - MER34B LTR ERV1 0 585 438 1730 197 0 7 chr10 41476841 41477131 -104112157 - AluJo SINE Alu -24 288 1 872 174 25 156 chr10 41477131 41477276 -104112012 - MER34B LTR ERV1 -147 438 276 1124 146 10 94 chr10 41477277 41477486 -104111802 - MER7A DNA MER2_type -2692 336 116 2036 126 0 32 chr10 41477486 41477825 -104111463 + AluSq SINE Alu 1 313 0 1124 146 10 94 chr10 41477825 41477913 -104111375 - MER7A DNA MER2_type -2912 116 22 1096 155 55 59 chr10 41477932 41478203 -104111085 - MER34B LTR ERV1 -291 274 5 852 293 67 78 chr10 41478664 41479145 -104110143 + L2 LINE L2 2511 2974 -339 1945 122 0 11 chr10 41479145 41479408 -104109880 - AluSq SINE Alu -53 260 1 852 293 67 78 chr10 41479408 41479661 -104109627 + L2 LINE L2 2974 3228 -85 887 277 28 20 chr10 41480002 41480255 -104109033 + MIR SINE MIR 2 256 -6 1767 74 39 0 chr10 41480271 41480529 -104108759 + L1MA1 LINE L1 6035 6302 0 29 0 0 0 chr10 41480529 41480558 -104108730 + AT_rich Low_complexity Low_complexity 1 29 0 247 327 107 39 chr10 41481137 41481342 -104107946 + MIR SINE MIR 17 235 -27 431 247 101 0 chr10 41481563 41481741 -104107547 + L1MC4 LINE L1 6877 7072 -970 993 163 19 12 chr10 41481765 41481925 -104107363 + FRAM SINE Alu 1 158 -18 2323 105 0 3 chr10 41481957 41482263 -104107025 - AluSc SINE Alu -4 305 1 1414 149 50 71 chr10 41482335 41482616 -104106672 + AluJo SINE Alu 21 295 -17 1019 201 108 0 chr10 41482895 41483173 -104106115 + L1 LINE L1 5096 5403 -743 288 256 39 0 chr10 41483265 41483343 -104105945 - MIR SINE MIR -127 135 55 4196 170 9 7 chr10 41483420 41484190 -104105098 + L1PA16 LINE L1 5382 6153 -13 371 321 155 0 chr10 41484567 41484735 -104104553 - MIR SINE MIR -14 248 55 1412 192 69 3 chr10 41485697 41486015 -104103273 - MER44D DNA MER2_type 0 609 1 1224 251 106 9 chr10 41486302 41486764 -104102524 - Charlie4a DNA MER1_type -1 507 1 2314 84 0 3 chr10 41487487 41487802 -104101486 - AluY SINE Alu 0 314 1 242 320 107 95 chr10 41487864 41488255 -104101033 - L2 LINE L2 -3 3269 2874 226 365 40 32 chr10 41488418 41488544 -104100744 - L2 LINE L2 -601 2713 2587 2124 96 0 36 chr10 41489726 41490027 -104099261 + AluSg SINE Alu 1 290 -20 194 300 20 0 chr10 41490384 41490434 -104098854 - L2 LINE L2 -19 3294 3244 259 300 50 0 chr10 41491279 41491359 -104097929 - MER91C DNA MER1_type -35 105 22 321 283 125 0 chr10 41492015 41492135 -104097153 - MLT1G1 LTR MaLR -34 561 427 866 283 32 78 chr10 41492557 41493095 -104096193 - MER34 LTR ERV1 -29 513 1 261 0 0 0 chr10 41493244 41493273 -104096015 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 1937 145 0 3 chr10 41493275 41493558 -104095730 - AluSx SINE Alu -30 282 1 1749 130 16 0 chr10 41493879 41494126 -104095162 - AluSq SINE Alu -23 290 40 2126 115 19 19 chr10 41494942 41495254 -104094034 + AluSx SINE Alu 1 312 0 23 33 0 0 chr10 41495793 41495823 -104093465 + AT_rich Low_complexity Low_complexity 1 30 0 319 197 16 0 chr10 41497041 41497102 -104092186 + MIR SINE MIR 70 131 -131 772 232 19 58 chr10 41497102 41497336 -104091952 + MIR SINE MIR 38 261 -1 25 51 0 0 chr10 41499291 41499330 -104089958 + AT_rich Low_complexity Low_complexity 1 39 0 280 250 0 36 chr10 41499330 41499414 -104089874 + MIR SINE MIR 128 208 -54 2056 127 3 3 chr10 41499644 41499952 -104089336 + AluSc SINE Alu 2 309 0 674 264 17 6 chr10 41499997 41500171 -104089117 + MER5B DNA MER1_type 3 178 0 184 154 0 51 chr10 41500466 41500505 -104088783 - L3b LINE CR1 -351 1232 1196 218 218 18 0 chr10 41501004 41501059 -104088229 + (TTTG)n Simple_repeat Simple_repeat 2 57 0 2093 134 0 0 chr10 41501291 41501598 -104087690 - AluSx SINE Alu 0 307 1 336 244 70 45 chr10 41501616 41501858 -104087430 - L1ME4a LINE L1 -238 5883 5636 318 219 20 0 chr10 41502832 41502978 -104086310 + (TA)n Simple_repeat Simple_repeat 1 149 0 1212 212 22 18 chr10 41502980 41503258 -104086030 - AluJo SINE Alu -33 279 1 298 355 60 17 chr10 41503294 41503528 -104085760 + L2 LINE L2 2613 2856 -458 205 109 43 22 chr10 41503921 41503967 -104085321 + (TAAA)n Simple_repeat Simple_repeat 4 50 0 2428 76 0 0 chr10 41504544 41504848 -104084440 - AluY SINE Alu -7 304 1 699 197 16 0 chr10 41504922 41505049 -104084239 - FLAM_C SINE Alu -4 129 1 1605 233 36 42 chr10 41505226 41505732 -104083556 - MLT1D LTR MaLR 0 505 3 3715 58 6 0 chr10 41505932 41506400 -104082888 + L1PA8 LINE L1 5700 6170 -2 364 318 104 50 chr10 41506529 41507190 -104082098 - L1M4 LINE L1 -3118 3028 2332 504 195 205 25 chr10 41507225 41507425 -104081863 - MER106A DNA MER1_type 0 236 1 348 24 0 0 chr10 41508083 41508124 -104081164 + (TG)n Simple_repeat Simple_repeat 2 42 0 400 306 34 14 chr10 41508844 41508991 -104080297 + MIR3 SINE MIR 44 193 -15 554 209 174 94 chr10 41509350 41509861 -104079427 + MER34C LTR ERV1 34 585 0 2105 122 0 13 chr10 41510167 41510470 -104078818 + AluSx SINE Alu 1 299 -13 229 256 12 23 chr10 41511334 41511404 -104077884 + CT-rich Low_complexity Low_complexity 4 74 -14 1669 161 21 18 chr10 41511404 41511690 -104077598 - AluJo SINE Alu -11 301 15 229 256 12 23 chr10 41511690 41511705 -104077583 + CT-rich Low_complexity Low_complexity 74 88 0 246 208 0 0 chr10 41512083 41512136 -104077152 + CT-rich Low_complexity Low_complexity 2 54 0 1965 143 13 0 chr10 41512142 41512475 -104076813 - AluSx SINE Alu 0 312 1 1917 157 0 16 chr10 41512893 41513199 -104076089 - AluSx SINE Alu -11 301 1 368 256 92 0 chr10 41513363 41513499 -104075789 - MIR SINE MIR -64 198 42 22 0 0 0 chr10 41514331 41514353 -104074935 + AT_rich Low_complexity Low_complexity 1 22 0 2519 279 69 12 chr10 41516829 41518372 -104070916 - L1ME3A LINE L1 -15 6155 4523 377 255 77 21 chr10 41518392 41518627 -104070661 - L1ME3A LINE L1 -3161 2985 2738 28 29 0 0 chr10 41518627 41518662 -104070626 + AT_rich Low_complexity Low_complexity 1 35 0 2294 121 0 0 chr10 41518923 41519229 -104070059 - AluSg SINE Alu -4 306 1 28 0 0 0 chr10 41519704 41519732 -104069556 + AT_rich Low_complexity Low_complexity 1 28 0 859 165 0 82 chr10 41519961 41520131 -104069157 - FRAM SINE Alu -20 156 1 314 368 32 8 chr10 41520234 41520359 -104068929 - L2 LINE L2 -5 3267 3140 1017 202 204 34 chr10 41520365 41520810 -104068478 - HsTC2a DNA Tc2 -216 528 8 22 56 0 0 chr10 41521505 41521541 -104067747 + AT_rich Low_complexity Low_complexity 1 36 0 1048 130 35 25 chr10 41521557 41521757 -104067531 - L1MA8 LINE L1 -30 6261 6060 918 89 39 21 chr10 41522131 41522414 -104066874 + (TAGA)n Simple_repeat Simple_repeat 4 289 0 263 138 21 43 chr10 41522452 41522546 -104066742 + (TAGA)n Simple_repeat Simple_repeat 2 93 0 758 234 73 108 chr10 41522550 41522922 -104066366 - MLT1A1 LTR MaLR -1 364 6 880 45 0 0 chr10 41523687 41523798 -104065490 - L1PA5 LINE L1 -4 6150 6040 225 304 70 43 chr10 41524485 41524600 -104064688 + MIR SINE MIR 7 124 -138 2221 102 3 0 chr10 41524620 41524905 -104064383 - AluSq SINE Alu -27 286 1 367 273 58 8 chr10 41524925 41525046 -104064242 + MIR SINE MIR 124 250 -12 2509 54 0 3 chr10 41525668 41525965 -104063323 + AluY SINE Alu 1 296 -15 846 183 6 74 chr10 41525975 41526150 -104063138 + FRAM SINE Alu 1 163 -13 2165 127 0 0 chr10 41526151 41526443 -104062845 + AluSg SINE Alu 1 292 -18 843 131 15 0 chr10 41526707 41526837 -104062451 - FLAM_C SINE Alu 0 133 2 750 312 113 60 chr10 41527138 41528552 -104060736 + L2 LINE L2 1246 2734 -580 185 222 0 22 chr10 41528978 41529023 -104060265 + L2 LINE L2 3265 3308 -5 228 67 0 0 chr10 41530761 41530791 -104058497 + (A)n Simple_repeat Simple_repeat 1 30 0 570 239 75 0 chr10 41531186 41531387 -104057901 - L1MD3 LINE L1 -9 7986 7771 180 191 48 0 chr10 41532046 41532088 -104057200 + MER5A DNA MER1_type 125 168 -21 * 193 182 0 0 chr10 41532076 41532109 -104057179 + L2 LINE L2 3274 3306 -7 23 33 0 0 chr10 41533826 41533856 -104055432 + AT_rich Low_complexity Low_complexity 1 30 0 2214 102 3 23 chr10 41534373 41534500 -104054788 + AluSx SINE Alu 1 129 -183 252 86 0 0 chr10 41534500 41534535 -104054753 + (TA)n Simple_repeat Simple_repeat 2 36 0 2214 102 3 23 chr10 41534535 41534712 -104054576 + AluSx SINE Alu 129 299 -13 289 148 98 0 chr10 41534986 41535047 -104054241 + MER5C DNA MER1_type 54 120 -204 3814 112 20 27 chr10 41535047 41535431 -104053857 - MER51C LTR ERV1 0 640 280 4613 70 52 5 chr10 41535431 41536061 -104053227 + PABL_A LTR ERV1 1 660 0 3814 112 20 27 chr10 41536061 41536339 -104052949 - MER51C LTR ERV1 -360 280 1 585 193 176 0 chr10 41536340 41536516 -104052772 + MER5C DNA MER1_type 118 324 0 2284 110 0 10 chr10 41539479 41539788 -104049500 - AluSg SINE Alu -4 306 1 256 135 0 0 chr10 41539872 41539909 -104049379 - Alu SINE Alu -265 37 1 240 162 0 0 chr10 41539996 41540033 -104049255 - Alu SINE Alu -262 37 1 250 269 43 92 chr10 41540219 41540360 -104048928 - MIR3 SINE MIR -65 143 10 21 36 0 0 chr10 41540518 41540546 -104048742 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr10 41542911 41542939 -104046349 + AT_rich Low_complexity Low_complexity 1 28 0 444 62 0 0 chr10 41543733 41543797 -104045491 + (CA)n Simple_repeat Simple_repeat 2 65 0 5810 164 31 28 chr10 41544617 41545210 -104044078 - L1MC3 LINE L1 -27 7758 7169 2382 100 7 0 chr10 41545210 41545520 -104043768 + AluSp SINE Alu 1 312 -1 5810 164 31 28 chr10 41545520 41546164 -104043124 - L1MC3 LINE L1 -616 7169 6516 585 286 91 12 chr10 41546675 41546916 -104042372 - MIR SINE MIR -1 261 2 187 344 16 0 chr10 41547238 41547299 -104041989 - L2 LINE L2 -5 3267 3206 1922 132 19 0 chr10 41547482 41547748 -104041540 - AluSx SINE Alu -19 293 23 719 258 121 5 chr10 41547789 41547979 -104041309 + MIR SINE MIR 17 228 -34 342 358 11 6 chr10 41547986 41548165 -104041123 + (TG)n Simple_repeat Simple_repeat 1 180 0 207 239 57 0 chr10 41549134 41549222 -104040066 + A-rich Low_complexity Low_complexity 2 94 0 204 349 61 0 chr10 41549673 41549739 -104039549 + L2 LINE L2 3197 3266 -47 314 317 0 17 chr10 41551323 41551443 -104037845 - MER117 DNA MER1_type -52 145 28 375 326 190 34 chr10 41552077 41552430 -104036858 + L2 LINE L2 2860 3267 -5 251 182 45 82 chr10 41552949 41553059 -104036229 - MER103 DNA DNA -11 155 50 285 212 0 30 chr10 41553336 41553402 -104035886 + MIR3 SINE MIR 121 184 -24 27617 46 7 0 chr10 41553463 41557862 -104031426 - L1PA5 LINE L1 -8 6146 1720 443 278 66 36 chr10 41558025 41558410 -104030878 - MLT1J LTR MaLR -24 487 50 1844 143 7 11 chr10 41558881 41559168 -104030120 + AluJb SINE Alu 1 286 -26 21 0 0 0 chr10 41559169 41559190 -104030098 + AT_rich Low_complexity Low_complexity 1 21 0 2201 113 0 0 chr10 41559375 41559667 -104029621 + AluSg SINE Alu 1 292 -18 281 311 11 56 chr10 41560688 41560868 -104028420 + MIR SINE MIR 65 236 -26 294 272 98 11 chr10 41561099 41561191 -104028097 + MIR SINE MIR 76 175 -87 268 197 148 0 chr10 41561571 41561632 -104027656 - L2 LINE L2 0 3313 3244 250 248 73 59 chr10 41561633 41561873 -104027415 + L1MEd LINE L1 1076 1353 -4862 758 184 0 0 chr10 41561922 41562047 -104027241 + FLAM_C SINE Alu 3 127 -16 2766 238 52 22 chr10 41562053 41563105 -104026183 - L1M4 LINE L1 -2365 3781 2698 522 279 118 42 chr10 41563552 41563814 -104025474 + L2 LINE L2 3032 3313 0 2602 180 78 3 chr10 41565143 41565711 -104023577 + LTR31 LTR ERV1 1 610 -9 921 211 160 82 chr10 41566537 41567012 -104022276 + MLT1E2 LTR MaLR 115 626 0 512 254 134 22 chr10 41567217 41567474 -104021814 + L1ME LINE L1 5397 5682 -439 869 274 20 14 chr10 41567518 41567814 -104021474 - MER46C DNA MER2_type -40 298 1 863 163 48 66 chr10 41568272 41568629 -104020659 - MSTD LTR MaLR 0 457 54 1637 127 120 8 chr10 41568629 41568888 -104020400 - AluSg1 SINE Alu -21 288 1 863 163 48 66 chr10 41568888 41568942 -104020346 - MSTD LTR MaLR -403 54 1 1751 155 32 91 chr10 41569047 41569290 -104019998 - LTR56 LTR ERV1 0 445 240 508 115 0 0 chr10 41569290 41569368 -104019920 - L1PA7 LINE L1 0 6154 6077 1751 155 32 91 chr10 41569368 41569588 -104019700 - LTR56 LTR ERV1 -205 240 9 189 0 0 0 chr10 41569919 41569940 -104019348 + (TATG)n Simple_repeat Simple_repeat 2 22 0 2300 91 3 0 chr10 41570351 41570647 -104018641 - AluSp SINE Alu -16 297 1 2944 64 3 13 chr10 41571217 41571605 -104017683 + L1PA6 LINE L1 5754 6137 -17 180 0 0 0 chr10 41571605 41571625 -104017663 + (CTA)n Simple_repeat Simple_repeat 1 20 0 207 0 0 0 chr10 41571738 41571761 -104017527 + (A)n Simple_repeat Simple_repeat 1 23 0 1019 167 43 0 chr10 41574944 41574991 -104014297 + MER3 DNA MER1_type 4 58 -151 336 238 100 44 chr10 41574991 41575151 -104014137 - MER3 DNA MER1_type -3 206 38 781 159 16 0 chr10 41575643 41575769 -104013519 - FRAM SINE Alu -20 156 29 758 258 152 16 chr10 41578472 41578848 -104010440 + L1ME3 LINE L1 5646 6072 -90 1139 197 106 3 chr10 41579355 41579639 -104009649 - MER33 DNA MER1_type 0 324 12 421 190 60 20 chr10 41579675 41579775 -104009513 + MER5A DNA MER1_type 4 107 -82 832 216 79 0 chr10 41579966 41580156 -104009132 + MER3 DNA MER1_type 4 208 -1 563 126 0 0 chr10 41581607 41581694 -104007594 - AluJo/FRAM SINE Alu -16 296 210 1088 139 0 6 chr10 41581694 41581852 -104007436 + AluSc SINE Alu 136 292 -17 1145 150 70 121 chr10 41581892 41582206 -104007082 + AluJb SINE Alu 2 299 -3 279 231 148 74 chr10 41582290 41582398 -104006890 + AluJb SINE Alu 110 225 -77 1198 124 5 62 chr10 41582403 41582612 -104006676 - AluJb SINE Alu -114 198 2 524 161 0 0 chr10 41582672 41582753 -104006535 - AluSg/x SINE Alu -23 286 206 2096 82 14 20 chr10 41582833 41583125 -104006163 - AluSg SINE Alu -20 290 1 260 143 159 0 chr10 41584193 41584256 -104005032 + AluJb SINE Alu 45 117 -185 450 202 0 20 chr10 41584282 41584381 -104004907 + FRAM SINE Alu 63 159 -17 954 101 22 29 chr10 41584441 41584580 -104004708 + AluJo SINE Alu 23 160 -152 546 179 7 86 chr10 41584587 41584727 -104004561 - FLAM_C SINE Alu 0 133 5 1993 114 11 0 chr10 41584767 41585040 -104004248 + AluSx SINE Alu 2 277 -35 1023 227 15 0 chr10 41585042 41585245 -104004043 + AluJo SINE Alu 76 281 -31 180 0 0 0 chr10 41585245 41585265 -104004023 + (CTAG)n Simple_repeat Simple_repeat 1 20 0 2071 115 0 33 chr10 41585988 41586316 -104002972 - AluSq SINE Alu 0 313 1 2272 102 10 0 chr10 41586338 41586633 -104002655 + AluSp SINE Alu 1 298 -15 2224 113 6 3 chr10 41586770 41587081 -104002207 - AluSx SINE Alu 0 312 1 2146 139 0 13 chr10 41587295 41587474 -104001814 - AluSx SINE Alu 0 312 137 2266 119 3 0 chr10 41587474 41587777 -104001511 - AluSp SINE Alu -9 304 1 2146 139 0 13 chr10 41587777 41587913 -104001375 - AluSx SINE Alu -175 137 1 225 266 16 0 chr10 41589396 41589460 -103999828 + MIR SINE MIR 21 85 -177 305 98 0 0 chr10 41590146 41590197 -103999091 + AluSp/q SINE Alu 251 301 -2 2014 110 14 3 chr10 41591054 41591356 -103997932 + AluSq SINE Alu 1 305 0 1740 171 14 0 chr10 41592145 41592437 -103996851 + AluSx SINE Alu 2 297 -15 2155 131 0 3 chr10 41592614 41592920 -103996368 - AluSx SINE Alu -7 305 1 1365 221 175 2 chr10 41592951 41593380 -103995908 - MLT1D LTR MaLR -2 503 1 1316 156 40 46 chr10 41593508 41593810 -103995478 - AluY SINE Alu -11 300 1 2213 112 0 0 chr10 41594504 41594799 -103994489 - AluSg1 SINE Alu -14 295 1 2227 107 10 0 chr10 41594860 41595159 -103994129 + AluSp SINE Alu 3 304 -9 2111 114 4 0 chr10 41595956 41596237 -103993051 - AluSg SINE Alu -28 282 1 1741 162 10 7 chr10 41596978 41597268 -103992020 - AluSx SINE Alu -19 293 3 1783 124 0 12 chr10 41597579 41597836 -103991452 - AluSq SINE Alu -14 299 46 411 192 27 0 chr10 41597836 41597909 -103991379 - AluS SINE Alu -237 76 2 180 0 0 0 chr10 41598114 41598134 -103991154 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1787 155 11 4 chr10 41598135 41598413 -103990875 - AluSq SINE Alu -33 280 1 1677 173 88 16 chr10 41599534 41599852 -103989436 + MSTD LTR MaLR 1 341 -55 678 163 17 22 chr10 41599887 41600065 -103989223 + CT-rich Low_complexity Low_complexity 4 180 0 359 182 0 0 chr10 41600065 41600131 -103989157 + MSTD LTR MaLR 330 395 -1 857 205 42 121 chr10 41600614 41600946 -103988342 - L1MC4 LINE L1 -938 7069 6718 1814 98 0 0 chr10 41602662 41602886 -103986402 - AluSq SINE Alu -87 226 3 369 0 0 0 chr10 41603205 41603246 -103986042 + (TG)n Simple_repeat Simple_repeat 2 42 0 1593 208 0 0 chr10 41603247 41603531 -103985757 - AluJb SINE Alu -28 284 1 1063 138 0 0 chr10 41603943 41604088 -103985200 - AluJb SINE Alu -38 274 130 543 176 9 65 chr10 41604099 41604207 -103985081 - MER8 DNA MER2_type -134 105 4 631 175 29 0 chr10 41604427 41604530 -103984758 + U6 snRNA snRNA 2 107 0 308 254 4 33 chr10 41604572 41604690 -103984598 - L1MC4 LINE L1 -469 5652 5577 482 111 12 25 chr10 41604695 41604776 -103984512 + AluJ/FLAM SINE Alu 4 83 -229 2163 116 7 0 chr10 41604971 41605265 -103984023 - AluSg SINE Alu -14 296 1 1486 191 30 30 chr10 41605326 41605629 -103983659 - AluJo SINE Alu -7 305 3 32 26 0 0 chr10 41605699 41605738 -103983550 + AT_rich Low_complexity Low_complexity 1 39 0 356 266 18 18 chr10 41605891 41606000 -103983288 - L1MC4a LINE L1 -1977 5831 5723 1376 223 7 23 chr10 41606038 41606339 -103982949 + AluJo SINE Alu 1 296 -16 592 235 0 0 chr10 41606341 41606456 -103982832 + AluJb SINE Alu 185 299 -13 207 203 47 31 chr10 41606834 41606898 -103982390 + (GGGTG)n Simple_repeat Simple_repeat 1 65 0 219 299 93 31 chr10 41607128 41607225 -103982063 - MIR SINE MIR -75 187 85 7065 110 23 16 chr10 41607352 41608416 -103980872 - MER11C LTR ERVK 0 1071 1 2727 232 80 40 chr10 41608436 41608717 -103980571 - MER21B LTR ERV1 -61 802 534 1824 161 0 16 chr10 41608717 41609022 -103980266 - AluJo SINE Alu -12 300 1 2727 232 80 40 chr10 41609022 41609331 -103979957 - MER21B LTR ERV1 -329 534 173 2052 143 0 3 chr10 41609331 41609625 -103979663 + AluSq SINE Alu 1 293 -20 2727 232 80 40 chr10 41609625 41609787 -103979501 - MER21B LTR ERV1 -690 173 19 346 291 0 0 chr10 41609809 41609888 -103979400 - MER21B LTR ERV1 -773 90 12 1507 206 0 7 chr10 41609894 41610166 -103979122 - AluJo SINE Alu -38 274 5 1499 194 14 57 chr10 41610169 41610520 -103978768 + MLT1D LTR MaLR 162 497 -8 1568 199 10 14 chr10 41610547 41610674 -103978614 + AluJb SINE Alu 10 136 -176 2106 102 35 0 chr10 41610674 41610958 -103978330 + AluSg1 SINE Alu 1 294 -15 1568 199 10 14 chr10 41610958 41611121 -103978167 + AluJb SINE Alu 136 299 -13 1216 271 80 32 chr10 41611121 41611732 -103977556 - L2 LINE L2 -216 3097 2456 749 196 0 0 chr10 41611829 41611962 -103977326 + FLAM_C SINE Alu 1 133 0 23 0 0 0 chr10 41611962 41611985 -103977303 + AT_rich Low_complexity Low_complexity 1 23 0 1303 240 10 7 chr10 41611985 41612281 -103977007 + AluJo SINE Alu 2 298 -4 342 245 11 11 chr10 41612426 41612520 -103976768 + LTR37A LTR ERV1 240 333 -93 2062 147 0 3 chr10 41612731 41613037 -103976251 - AluSq SINE Alu -8 305 1 1621 185 20 20 chr10 41613339 41613641 -103975647 - AluJo SINE Alu -10 302 1 2776 196 39 34 chr10 41613662 41614281 -103975007 - L1MB8 LINE L1 -5 6173 5552 671 189 0 0 chr10 41614281 41614392 -103974896 + FLAM_A SINE Alu 4 114 -19 481 173 8 102 chr10 41614426 41614514 -103974774 - L1ME LINE L1 -577 5589 5505 1694 181 10 7 chr10 41614514 41614807 -103974481 - AluJb SINE Alu -18 294 1 481 173 8 102 chr10 41614807 41614838 -103974450 - L1ME LINE L1 -661 5505 5473 597 201 0 122 chr10 41614896 41614956 -103974332 + AluJo SINE Alu 24 90 -222 312 83 0 0 chr10 41614956 41615004 -103974284 + (TTG)n Simple_repeat Simple_repeat 1 48 0 1802 153 22 4 chr10 41615004 41615278 -103974010 - AluSx SINE Alu -33 279 1 597 201 0 122 chr10 41615278 41615380 -103973908 + AluJo SINE Alu 88 167 -145 1396 166 126 15 chr10 41615394 41615665 -103973623 - AluJo SINE Alu -1 301 1 1373 238 0 14 chr10 41615918 41616212 -103973076 - AluJo SINE Alu -18 294 5 344 201 25 132 chr10 41616213 41616372 -103972916 - MLT1D LTR MaLR -292 213 72 189 261 72 14 chr10 41616441 41616510 -103972778 - L2 LINE L2 -32 3281 3209 1726 179 0 13 chr10 41617143 41617450 -103971838 - AluJb SINE Alu -9 303 1 2310 98 3 0 chr10 41617536 41617831 -103971457 - AluSp SINE Alu -17 296 1 24 53 0 0 chr10 41617831 41617869 -103971419 + AT_rich Low_complexity Low_complexity 1 38 0 1853 165 0 3 chr10 41617871 41618162 -103971126 - AluJb SINE Alu -18 294 5 2982 127 9 2 chr10 41618522 41618954 -103970334 + MER1A DNA MER1_type 56 490 -39 704 197 0 0 chr10 41618967 41619084 -103970204 - FLAM_C SINE Alu -18 125 9 569 126 53 0 chr10 41619125 41619403 -103969885 + AluJb SINE Alu 194 476 0 1154 0 16 55 chr10 41619221 41619497 -103969791 + (TAAAA)n Simple_repeat Simple_repeat 3 271 0 191 281 21 31 chr10 41619799 41619895 -103969393 - L2 LINE L2 -211 3061 2967 244 360 36 0 chr10 41620178 41620289 -103968999 - MIR SINE MIR -75 187 73 2595 235 51 43 chr10 41620452 41620697 -103968591 - MER21B LTR ERV1 -112 751 510 1604 208 13 0 chr10 41620697 41620995 -103968293 - AluJo SINE Alu -10 302 1 2595 235 51 43 chr10 41620995 41621065 -103968223 - MER21B LTR ERV1 -353 510 442 1589 186 3 46 chr10 41621065 41621371 -103967917 + AluJb SINE Alu 2 294 -18 2595 235 51 43 chr10 41621371 41621781 -103967507 - MER21B LTR ERV1 -421 442 19 306 286 0 0 chr10 41621807 41621877 -103967411 - MER21B LTR ERV1 -777 86 17 1119 177 3 118 chr10 41621878 41622166 -103967122 - AluJb SINE Alu -13 299 45 686 225 0 0 chr10 41622166 41622286 -103967002 - FLAM_A SINE Alu -13 120 1 648 235 0 7 chr10 41622291 41622427 -103966861 - FLAM_C SINE Alu -7 136 2 1502 175 25 76 chr10 41622427 41622781 -103966507 + MLT1D LTR MaLR 162 497 -8 1719 178 23 13 chr10 41622790 41622924 -103966364 + AluJo SINE Alu 1 132 -180 2152 116 0 10 chr10 41622924 41623236 -103966052 + AluSq SINE Alu 1 313 0 1719 178 23 13 chr10 41623236 41623410 -103965878 + AluJo SINE Alu 132 312 0 1060 228 92 73 chr10 41623411 41624049 -103965239 - L2 LINE L2 -213 3100 2458 591 241 0 0 chr10 41624155 41624271 -103965017 + FLAM_C SINE Alu 9 124 -19 1300 234 14 3 chr10 41624295 41624590 -103964698 + AluJo SINE Alu 1 298 -14 2141 115 3 7 chr10 41624748 41625043 -103964245 + AluSq SINE Alu 5 298 -15 28 61 0 0 chr10 41625065 41625114 -103964174 + AT_rich Low_complexity Low_complexity 1 49 0 * 268 211 228 22 chr10 41625086 41625266 -103964022 + Charlie1 DNA MER1_type 2539 2755 -6 1358 205 8 4 chr10 41625320 41625588 -103963700 - AluJo SINE Alu -4 308 40 1054 189 0 5 chr10 41626188 41626378 -103962910 - AluJb SINE Alu -7 305 117 388 226 39 49 chr10 41626378 41626480 -103962808 - MER8 DNA MER2_type -136 103 3 1565 187 0 13 chr10 41626588 41626888 -103962400 + AluJo SINE Alu 1 296 -16 532 206 14 78 chr10 41627126 41627267 -103962021 + AluJo SINE Alu 11 142 -170 305 232 12 24 chr10 41627267 41627349 -103961939 - L1ME LINE L1 -558 5563 5483 1537 179 42 14 chr10 41627480 41627765 -103961523 - AluJo SINE Alu -19 293 1 279 231 33 44 chr10 41627830 41627921 -103961367 + LTR33A LTR ERVL 432 521 -2 2586 131 64 19 chr10 41628185 41628605 -103960683 + MER1A DNA MER1_type 1 439 -90 313 295 216 28 chr10 41629866 41630120 -103959168 + L1M2 LINE L1 766 1067 -5782 2200 108 0 0 chr10 41633353 41633650 -103955638 + AluSg SINE Alu 1 297 -13 312 384 39 22 chr10 41634021 41634250 -103955038 + L1M2 LINE L1 1018 1250 -5599 465 158 0 0 chr10 41636722 41636804 -103952484 - AluSq SINE Alu -2 311 230 862 152 21 7 chr10 41636806 41636951 -103952337 - AluSq SINE Alu -161 151 5 940 234 43 18 chr10 41636958 41637404 -103951884 - L1M2 LINE L1 -4226 2623 2069 2222 103 3 22 chr10 41637404 41637715 -103951573 - AluSg SINE Alu -5 305 1 940 234 43 18 chr10 41637715 41637821 -103951467 - L1M2 LINE L1 -4780 2069 1967 726 158 0 0 chr10 41637822 41637923 -103951365 - FLAM_C SINE Alu -40 103 3 765 112 0 28 chr10 41637927 41638034 -103951254 + AluJo/FLAM SINE Alu 29 132 -180 1859 107 3 66 chr10 41638036 41638325 -103950963 + AluSx SINE Alu 37 307 -5 275 291 30 70 chr10 41638719 41638811 -103950477 + L2 LINE L2 3118 3212 -101 2215 120 0 0 chr10 41638811 41639111 -103950177 + AluSq SINE Alu 1 300 -13 275 291 30 70 chr10 41639111 41639217 -103950071 + L2 LINE L2 3212 3308 -5 2002 126 0 0 chr10 41639657 41639927 -103949361 + AluSx SINE Alu 1 270 -42 353 246 109 36 chr10 41640051 41640161 -103949127 + L2 LINE L2 3195 3312 -1 22 35 0 0 chr10 41640548 41640577 -103948711 + AT_rich Low_complexity Low_complexity 1 29 0 1589 208 39 33 chr10 41640704 41641470 -103947818 - L1M4c LINE L1 -4071 2313 1451 957 137 41 25 chr10 41641471 41641668 -103947620 - L1MA5 LINE L1 0 6300 6101 1879 175 13 0 chr10 41642830 41643133 -103946155 - AluJb SINE Alu -5 307 1 425 387 45 28 chr10 41643296 41643847 -103945441 - L2 LINE L2 -2 3270 2710 516 257 0 9 chr10 41643858 41643971 -103945317 - L2 LINE L2 -5 3308 3197 191 146 24 0 chr10 41644251 41644292 -103944996 + (TA)n Simple_repeat Simple_repeat 1 42 0 601 125 0 0 chr10 41644438 41644534 -103944754 - L1MA5 LINE L1 -5 6295 6200 212 182 0 18 chr10 41644573 41644628 -103944660 + (CATATA)n Simple_repeat Simple_repeat 3 56 0 45 62 0 0 chr10 41645991 41646071 -103943217 + AT_rich Low_complexity Low_complexity 1 80 0 2520 60 0 0 chr10 41646143 41646441 -103942847 + AluY SINE Alu 1 298 -13 508 39 110 0 chr10 41646576 41646730 -103942558 + (TA)n Simple_repeat Simple_repeat 1 171 0 2062 116 86 50 chr10 41647754 41648116 -103941172 + THE1C LTR MaLR 1 375 0 29 47 0 0 chr10 41648202 41648245 -103941043 + AT_rich Low_complexity Low_complexity 1 43 0 1120 279 118 26 chr10 41648545 41649588 -103939700 - L1ME3A LINE L1 -94 6010 4906 1854 220 41 31 chr10 41649588 41650078 -103939210 - MLT1D LTR MaLR -10 495 1 309 286 116 15 chr10 41650275 41650474 -103938814 - L1ME3A LINE L1 -1430 4699 4481 * 598 218 16 31 chr10 41650464 41650657 -103938631 - L1ME3A LINE L1 -2163 3966 3777 1193 281 71 14 chr10 41650657 41651316 -103937972 - L2 LINE L2 -4 3309 2616 293 325 8 0 chr10 41651480 41651597 -103937691 + L1M4 LINE L1 3524 3641 -2505 384 288 109 51 chr10 41651603 41652086 -103937202 - MER65A LTR ERV1 0 445 2 257 250 183 0 chr10 41652217 41652321 -103936967 + L2 LINE L2 2321 2443 -871 700 302 92 47 chr10 41652995 41653462 -103935826 - L1ME3A LINE L1 -5285 834 347 859 316 52 52 chr10 41653542 41653966 -103935322 - MLT1E LTR MaLR -148 445 22 511 332 85 49 chr10 41655085 41655628 -103933660 - L2 LINE L2 0 3272 2716 182 271 86 14 chr10 41655719 41655789 -103933499 - L2 LINE L2 0 3313 3239 2200 116 0 3 chr10 41656289 41656592 -103932696 - AluSq SINE Alu -11 302 1 186 213 64 0 chr10 41656623 41656670 -103932618 + MIR SINE MIR 100 149 -113 6090 98 27 0 chr10 41656728 41657592 -103931696 - L1PA14 LINE L1 0 6161 5275 932 218 0 29 chr10 41657663 41657837 -103931451 + FAM SINE Alu 4 172 -3 206 128 26 0 chr10 41657859 41657898 -103931390 + (TATATG)n Simple_repeat Simple_repeat 2 41 0 390 42 0 0 chr10 41658058 41658106 -103931182 + (CA)n Simple_repeat Simple_repeat 1 48 0 198 311 66 66 chr10 41658990 41659096 -103930192 - L2 LINE L2 -6 3266 3161 783 188 115 19 chr10 41659106 41659340 -103929948 - AluJo SINE Alu -12 300 1 355 328 168 13 chr10 41659349 41659587 -103929701 - L2 LINE L2 -112 3201 2927 271 326 22 0 chr10 41659799 41659891 -103929397 + MIR SINE MIR 82 175 -87 1125 223 127 13 chr10 41659895 41660195 -103929093 - MLT1C LTR MaLR 0 467 134 273 348 54 0 chr10 41661138 41661250 -103928038 + MER5B DNA MER1_type 1 118 -60 233 277 128 21 chr10 41661928 41662043 -103927245 - L1ME4a LINE L1 -4 6117 6016 210 37 0 0 chr10 41662043 41662070 -103927218 + (TA)n Simple_repeat Simple_repeat 2 28 0 233 277 128 21 chr10 41662070 41662142 -103927146 - L1ME4a LINE L1 -105 6016 5910 278 333 159 43 chr10 41662602 41663161 -103926127 - L3 LINE CR1 -10 1567 944 448 290 47 24 chr10 41663172 41663341 -103925947 + LTR33 LTR ERVL 1 173 -348 2311 152 57 31 chr10 41663463 41663483 -103925805 - MSTB1 LTR MaLR 0 432 414 240 35 0 0 chr10 41663483 41663512 -103925776 + (TG)n Simple_repeat Simple_repeat 2 30 0 2311 152 57 31 chr10 41663512 41663762 -103925526 - MSTB1 LTR MaLR -18 414 145 2327 85 0 3 chr10 41663762 41664056 -103925232 + AluSq SINE Alu 5 297 -16 2311 152 57 31 chr10 41664056 41664205 -103925083 - MSTB1 LTR MaLR -287 145 1 273 118 0 0 chr10 41664214 41664265 -103925023 + (GAATG)n Satellite Satellite 4 54 0 639 178 0 0 chr10 41664297 41664471 -103924817 + (GAATG)n Satellite Satellite 2 175 0 876 133 0 0 chr10 41664497 41664677 -103924611 + (GAATG)n Satellite Satellite 1 180 0 786 149 3 18 chr10 41664691 41665025 -103924263 + (GAATG)n Satellite Satellite 1 329 0 918 151 0 0 chr10 41665039 41665579 -103923709 + (GAATG)n Satellite Satellite 1 540 0 827 169 0 14 chr10 41665608 41665971 -103923317 + (GAATG)n Satellite Satellite 1 357 0 931 105 7 18 chr10 41665987 41666352 -103922936 + (GAATG)n Satellite Satellite 1 540 0 270 125 0 0 chr10 41666363 41666411 -103922877 + (GAATG)n Satellite Satellite 2 49 0 865 151 8 13 chr10 41666427 41666831 -103922457 + (GAATG)n Satellite Satellite 1 402 0 747 140 0 0 chr10 41666882 41667039 -103922249 + (GAATG)n Satellite Satellite 1 157 0 1002 133 0 2 chr10 41667094 41667448 -103921840 + (GAATG)n Satellite Satellite 1 533 0 972 143 0 0 chr10 41667459 41667747 -103921541 + (GAATG)n Satellite Satellite 1 288 0 927 162 6 0 chr10 41667774 41668124 -103921164 + (GAATG)n Satellite Satellite 1 352 0 1092 117 0 6 chr10 41668142 41668501 -103920787 + (GAATG)n Satellite Satellite 2 534 0 948 150 0 0 chr10 41668523 41668854 -103920434 + (GAATG)n Satellite Satellite 1 331 0 925 135 9 3 chr10 41668878 41669232 -103920056 + (GAATG)n Satellite Satellite 1 356 0 966 138 0 2 chr10 41669285 41669618 -103919670 + (GAATG)n Satellite Satellite 1 511 0 1122 139 2 0 chr10 41669645 41670272 -103919016 + (GAATG)n Satellite Satellite 1 628 0 966 146 2 4 chr10 41670289 41671310 -103917978 + (GAATG)n Satellite Satellite 1 1197 0 877 117 6 6 chr10 41671310 41671489 -103917799 + (GAATG)n Satellite Satellite 2 180 0 966 122 0 0 chr10 41671769 41671949 -103917339 + (GAATG)n Simple_repeat Simple_repeat 1 180 0 1011 125 0 2 chr10 41672195 41672643 -103916645 + (GAATG)n Satellite Satellite 1 626 0 680 168 4 0 chr10 41672660 41672937 -103916351 + (GAATG)n Satellite Satellite 1 278 0 846 160 2 10 chr10 41672979 41673575 -103915713 + (GAATG)n Satellite Satellite 1 590 0 972 139 0 0 chr10 41673602 41674012 -103915276 + (GAATG)n Satellite Satellite 1 410 0 1065 143 0 0 chr10 41674024 41674566 -103914722 + (GAATG)n Satellite Satellite 1 542 0 273 89 0 0 chr10 41674577 41674622 -103914666 + (GAATG)n Satellite Satellite 1 45 0 939 150 0 0 chr10 41674646 41675022 -103914266 + (GAATG)n Satellite Satellite 1 376 0 815 141 0 6 chr10 41675043 41675220 -103914068 + (GAATG)n Satellite Satellite 4 179 0 963 167 0 4 chr10 41675238 41675894 -103913394 + (GAATG)n Satellite Satellite 1 653 0 754 118 0 54 chr10 41675908 41676094 -103913194 + (GAATG)n Satellite Satellite 4 179 0 598 183 6 6 chr10 41676107 41676287 -103913001 + (GAATG)n Satellite Satellite 1 180 0 774 140 3 10 chr10 41676316 41676722 -103912566 + (GAATG)n Satellite Satellite 1 402 0 1032 142 0 0 chr10 41676734 41677023 -103912265 + (GAATG)n Satellite Satellite 1 289 0 1006 132 3 5 chr10 41677040 41677481 -103911807 + (GAATG)n Satellite Satellite 1 619 0 1070 116 4 3 chr10 41677498 41678028 -103911260 + (GAATG)n Satellite Satellite 1 710 0 771 156 0 0 chr10 41678068 41678247 -103911041 + (GAATG)n Satellite Satellite 1 179 0 984 126 0 21 chr10 41678258 41678685 -103910603 + (GAATG)n Satellite Satellite 1 591 0 396 228 0 0 chr10 41678697 41678868 -103910420 + (GAATG)n Satellite Satellite 4 174 0 743 158 3 0 chr10 41678901 41679197 -103910091 + (GAATG)n Satellite Satellite 1 297 0 746 166 2 14 chr10 41679215 41679657 -103909631 + (GAATG)n Satellite Satellite 1 436 0 975 144 1 5 chr10 41679676 41680728 -103908560 + (GAATG)n Satellite Satellite 1 1227 0 700 157 3 3 chr10 41680789 41681096 -103908192 + (GAATG)n Satellite Satellite 1 307 0 969 135 0 0 chr10 41681109 41681451 -103907837 + (GAATG)n Satellite Satellite 1 342 0 1011 144 0 9 chr10 41681508 41682486 -103906802 + (GAATG)n Satellite Satellite 1 1147 0 770 141 0 27 chr10 41682523 41682708 -103906580 + (GAATG)n Satellite Satellite 1 180 0 732 160 0 0 chr10 41682729 41683136 -103906152 + (GAATG)n Satellite Satellite 1 407 0 978 117 0 0 chr10 41683149 41683328 -103905960 + (GAATG)n Satellite Satellite 1 179 0 642 174 0 0 chr10 41683348 41683520 -103905768 + (GAATG)n Satellite Satellite 4 175 0 924 133 0 0 chr10 41683573 41683753 -103905535 + (GAATG)n Satellite Satellite 1 180 0 703 146 6 6 chr10 41683778 41683956 -103905332 + (GAATG)n Satellite Satellite 3 180 0 255 79 0 0 chr10 41683997 41684035 -103905253 + (GAATG)n Satellite Satellite 4 41 0 858 167 2 11 chr10 41684052 41684604 -103904684 + (GAATG)n Satellite Satellite 1 546 0 483 177 0 0 chr10 41684616 41684746 -103904542 + (GAATG)n Satellite Satellite 2 131 0 799 141 6 6 chr10 41684766 41684943 -103904345 + (GAATG)n Satellite Satellite 4 180 0 237 98 0 0 chr10 41684953 41684994 -103904294 + (GACTG)n Simple_repeat Simple_repeat 2 42 0 989 108 6 0 chr10 41685029 41685205 -103904083 + (GAATG)n Satellite Satellite 4 180 0 894 150 0 6 chr10 41685250 41685585 -103903703 + (GAATG)n Satellite Satellite 3 509 0 970 126 4 14 chr10 41685597 41685962 -103903326 + (GAATG)n Satellite Satellite 1 540 0 294 87 0 0 chr10 41685985 41686031 -103903257 + (GAATG)n Satellite Satellite 2 47 0 903 146 4 4 chr10 41686053 41687531 -103901757 + (GAATG)n Satellite Satellite 1 1658 0 978 133 0 0 chr10 41687576 41688021 -103901267 + (GAATG)n Satellite Satellite 1 445 0 198 91 0 0 chr10 41688057 41688090 -103901198 + (GAATG)n Satellite Satellite 2 34 0 629 171 6 0 chr10 41688132 41688307 -103900981 + (GAATG)n Satellite Satellite 4 179 0 858 147 0 0 chr10 41688340 41688701 -103900587 + (GAATG)n Satellite Satellite 1 361 0 766 162 6 3 chr10 41688727 41689055 -103900233 + (GAATG)n Satellite Satellite 1 329 0 966 122 0 0 chr10 41689093 41689273 -103900015 + (GAATG)n Satellite Satellite 1 180 0 762 157 6 11 chr10 41689286 41690015 -103899273 + (GAATG)n Satellite Satellite 1 725 0 905 123 6 0 chr10 41690061 41690240 -103899048 + (GAATG)n Satellite Satellite 1 180 0 804 155 0 9 chr10 41690276 41690838 -103898450 + (GAATG)n Satellite Satellite 1 556 0 684 164 0 0 chr10 41690849 41691026 -103898262 + (GAATG)n Satellite Satellite 4 180 0 872 166 0 10 chr10 41691064 41691569 -103897719 + (GAATG)n Satellite Satellite 1 499 0 888 148 0 12 chr10 41691580 41691996 -103897292 + (GAATG)n Satellite Satellite 1 588 0 840 146 0 0 chr10 41692025 41692203 -103897085 + (GAATG)n Satellite Satellite 2 179 0 847 160 1 12 chr10 41692232 41693175 -103896113 + (GAATG)n Satellite Satellite 1 932 0 858 157 0 0 chr10 41693188 41693726 -103895562 + (GAATG)n Satellite Satellite 1 538 0 795 157 0 0 chr10 41693763 41694285 -103895003 + (GAATG)n Satellite Satellite 1 522 0 756 156 0 0 chr10 41694301 41694481 -103894807 + (GAATG)n Satellite Satellite 1 180 0 183 42 0 0 chr10 41694494 41694518 -103894770 + (GAATG)n Satellite Satellite 4 27 0 816 163 2 0 chr10 41694531 41695097 -103894191 + (GAATG)n Satellite Satellite 1 567 0 893 152 3 1 chr10 41695108 41695613 -103893675 + (GAATG)n Satellite Satellite 1 685 0 780 154 0 0 chr10 41695633 41695808 -103893480 + (GAATG)n Satellite Satellite 1 175 0 738 153 0 0 chr10 41695849 41696012 -103893276 + (GAATG)n Satellite Satellite 2 164 0 953 159 3 2 chr10 41696028 41697489 -103891799 + (GAATG)n Satellite Satellite 1 1462 0 885 152 0 6 chr10 41697534 41698168 -103891120 + (GAATG)n Satellite Satellite 1 630 0 1044 159 0 5 chr10 41698198 41699425 -103889863 + (GAATG)n Satellite Satellite 1 1221 0 828 136 0 0 chr10 41699439 41699615 -103889673 + (GAATG)n Satellite Satellite 4 179 0 864 163 0 0 chr10 41699633 41699961 -103889327 + (GAATG)n Satellite Satellite 1 328 0 693 168 0 0 chr10 41700004 41700183 -103889105 + (GAATG)n Satellite Satellite 2 180 0 789 150 0 0 chr10 41700199 41700379 -103888909 + (GAATG)n Satellite Satellite 1 180 0 861 155 0 0 chr10 41700398 41700639 -103888649 + (GAATG)n Satellite Satellite 1 241 0 1082 115 3 14 chr10 41700670 41701038 -103888250 + (GAATG)n Satellite Satellite 1 364 0 747 147 0 0 chr10 41701086 41701249 -103888039 + (GAATG)n Satellite Satellite 4 166 0 638 162 0 27 chr10 41701277 41701462 -103887826 + (GAATG)n Satellite Satellite 1 180 0 1059 132 6 5 chr10 41701477 41702188 -103887100 + (GAATG)n Satellite Satellite 1 891 0 717 168 0 0 chr10 41702212 41702391 -103886897 + (GAATG)n Satellite Satellite 1 179 0 886 95 0 53 chr10 41702431 41702621 -103886667 + (GAATG)n Satellite Satellite 1 180 0 718 136 0 28 chr10 41702667 41702843 -103886445 + (GAATG)n Satellite Satellite 4 174 0 912 128 0 0 chr10 41702866 41703045 -103886243 + (GAATG)n Satellite Satellite 2 180 0 429 162 0 0 chr10 41703059 41703170 -103886118 + (GAATG)n Satellite Satellite 2 112 0 1044 111 0 0 chr10 41703211 41703391 -103885897 + (GAATG)n Satellite Satellite 1 180 0 906 159 2 0 chr10 41703407 41703875 -103885413 + (GAATG)n Satellite Satellite 1 469 0 1056 157 2 4 chr10 41703915 41705309 -103883979 + (GAATG)n Satellite Satellite 1 1389 0 1023 148 0 1 chr10 41705333 41706188 -103883100 + (GAATG)n Satellite Satellite 1 1033 0 1014 136 0 0 chr10 41706199 41706569 -103882719 + (GAATG)n Satellite Satellite 1 370 0 587 174 0 27 chr10 41706604 41706788 -103882500 + (GAATG)n Satellite Satellite 2 180 0 922 147 1 7 chr10 41706800 41707891 -103881397 + (GAATG)n Satellite Satellite 4 1261 0 978 142 0 7 chr10 41707926 41708631 -103880657 + (GAATG)n Satellite Satellite 1 879 0 833 153 0 15 chr10 41708670 41709002 -103880286 + (GAATG)n Satellite Satellite 1 326 0 909 144 3 3 chr10 41709015 41709375 -103879913 + (GAATG)n Satellite Satellite 1 360 0 1155 140 2 2 chr10 41709387 41710506 -103878782 + (GAATG)n Satellite Satellite 1 1299 0 963 101 0 0 chr10 41710548 41710707 -103878581 + (GAATG)n Satellite Satellite 2 160 0 988 244 30 3 chr10 41710871 41711170 -103878118 - L1ME LINE L1 -600 5564 5258 1055 149 0 6 chr10 41711190 41711351 -103877937 - AluSp SINE Alu -4 309 150 1483 230 66 78 chr10 41711490 41711712 -103877576 - L1ME LINE L1 -1144 5002 4779 2017 135 14 46 chr10 41711712 41712060 -103877228 + MER1B DNA MER1_type 1 337 0 1483 230 66 78 chr10 41712060 41712176 -103877112 - L1ME LINE L1 -1367 4779 4663 2272 105 0 0 chr10 41712176 41712471 -103876817 - AluSx SINE Alu -16 296 2 1483 230 66 78 chr10 41712471 41712915 -103876373 - L1ME LINE L1 -1483 4663 4228 2895 131 41 6 chr10 41712916 41713426 -103875862 - Tigger3(Golem) DNA MER2_type -2 3027 2500 2258 101 0 3 chr10 41713429 41713727 -103875561 - AluSg SINE Alu -13 297 1 406 292 32 5 chr10 41713729 41713914 -103875374 - L1M4 LINE L1 -1819 4327 4138 2450 81 3 0 chr10 41714236 41714534 -103874754 + AluSp SINE Alu 1 299 -14 2274 99 7 3 chr10 41715784 41716087 -103873201 + AluSx SINE Alu 1 304 -8 2149 292 98 34 chr10 41716108 41716782 -103872506 - L2 LINE L2 -31 3282 2653 2191 117 0 7 chr10 41716782 41717080 -103872208 + AluSx SINE Alu 1 296 -16 2149 292 98 34 chr10 41717080 41717627 -103871661 - L2 LINE L2 -660 2653 1982 1977 150 7 3 chr10 41718772 41719066 -103870222 + AluSx SINE Alu 1 295 -17 263 286 95 54 chr10 41719297 41719538 -103869750 + HAL1b LINE L1 231 481 -867 649 231 143 23 chr10 41719997 41720264 -103869024 - L1MCa LINE L1 -3598 3343 3033 2157 114 7 3 chr10 41720264 41720563 -103868725 - AluSg SINE Alu -10 300 1 649 231 143 23 chr10 41720563 41720603 -103868685 - L1MCa LINE L1 -3908 3033 2999 751 125 0 0 chr10 41720625 41720737 -103868551 - AluSx SINE Alu -7 303 192 1069 128 0 0 chr10 41720738 41720879 -103868409 - AluSx SINE Alu -172 141 1 488 262 93 16 chr10 41720884 41721067 -103868221 - L1MCa LINE L1 -4102 3020 2824 1191 140 50 0 chr10 41721072 41721272 -103868016 + Tigger4(Zombi) DNA MER2_type 1 210 -2521 1998 127 132 5 chr10 41721324 41721695 -103867593 - MSTA LTR MaLR -10 418 1 498 78 0 165 chr10 41721732 41721835 -103867453 + Tigger4(Zombi) DNA MER2_type 2646 2731 0 376 232 16 24 chr10 41721839 41721964 -103867324 - L1MCa LINE L1 -4306 2816 2693 1222 181 59 8 chr10 41722002 41722240 -103867048 - AluJb SINE Alu -9 303 54 941 246 131 26 chr10 41722246 41722806 -103866482 - L1MCa LINE L1 -4455 2667 1860 614 240 32 0 chr10 41722937 41723091 -103866197 - L1MCa LINE L1 -5427 996 838 390 240 0 3 chr10 41723112 41723219 -103866069 - MER2 DNA MER2_type -133 106 1 2205 108 0 3 chr10 41724668 41724954 -103864334 + AluSx SINE Alu 5 289 -23 2003 132 3 0 chr10 41724954 41725249 -103864039 + AluSx SINE Alu 1 296 -16 2121 105 0 7 chr10 44725306 44725630 -100863658 + AluSx SINE Alu 1 322 0 352 338 30 15 chr10 44726458 44726591 -100862697 - L2 LINE L2 -4 3268 3134 4756 211 29 22 chr10 44726723 44727984 -100861304 - L1 LINE L1 -925 5221 3952 927 277 65 30 chr10 44727975 44728217 -100861071 + L1M4 LINE L1 4087 4319 -1827 * 195 42 0 0 chr10 44728217 44728241 -100861047 + (TA)n Simple_repeat Simple_repeat 1 24 0 927 277 65 30 chr10 44728241 44728598 -100860690 + L1M4 LINE L1 4319 4707 -1439 561 206 0 10 chr10 44730183 44730285 -100859003 + MER58A DNA MER1_type 1 101 -6 2234 76 0 0 chr10 44730321 44730597 -100858691 - AluY SINE Alu -35 276 1 472 233 67 0 chr10 44730597 44730717 -100858571 + MER58A DNA MER1_type 92 219 -5 322 357 60 5 chr10 44731412 44731597 -100857691 - L2 LINE L2 -263 3009 2815 2554 211 93 34 chr10 44731622 44732382 -100856906 - L1ME1 LINE L1 -9 6157 5353 958 164 0 0 chr10 44732386 44732532 -100856756 - FRAM SINE Alu -13 163 18 710 200 54 38 chr10 44732552 44732650 -100856638 - L1ME1 LINE L1 -782 5364 5269 2584 62 0 0 chr10 44732650 44732954 -100856334 - AluY SINE Alu -7 304 1 710 200 54 38 chr10 44732954 44733095 -100856193 - L1ME1 LINE L1 -877 5269 5121 423 299 196 23 chr10 44733116 44733550 -100855738 - L2 LINE L2 -1100 2214 1706 756 246 19 58 chr10 44733822 44734082 -100855206 - MER46C DNA MER2_type -1 337 88 1931 87 4 8 chr10 44734100 44734354 -100854934 - AluY SINE Alu -6 305 53 260 222 19 0 chr10 44734738 44734792 -100854496 + HsTC2 DNA Tc2 1230 1284 -614 356 293 106 0 chr10 44734811 44734934 -100854354 + MIR SINE MIR 78 213 -49 693 191 0 0 chr10 44735153 44735268 -100854020 - FLAM_A SINE Alu -18 115 1 243 0 0 0 chr10 44735596 44735623 -100853665 + (TCTCCC)n Simple_repeat Simple_repeat 1 27 0 5664 68 42 10 chr10 44735635 44736446 -100852842 + SVA Other Other 32 868 -518 6657 64 14 30 chr10 44736489 44737476 -100851812 + SVA Other Other 431 1386 0 392 268 36 9 chr10 44737558 44737670 -100851618 - L2 LINE L2 0 3313 3199 7868 23 83 6 chr10 44739696 44741226 -100848062 - L1P2 LINE L1 -336 5819 4154 * 12745 40 1 1 chr10 44741207 44742876 -100846412 - L1P2 LINE L1 -2741 3405 1738 2758 201 47 25 chr10 44743023 44743263 -100846025 - L1MB8 LINE L1 -65 6113 5880 2057 152 0 0 chr10 44743263 44743573 -100845715 - AluJb SINE Alu -2 310 1 2758 201 47 25 chr10 44743573 44744060 -100845228 - L1MB8 LINE L1 -298 5880 5370 423 0 0 0 chr10 44744061 44744108 -100845180 + (TTA)n Simple_repeat Simple_repeat 2 48 0 659 192 0 8 chr10 44744111 44744231 -100845057 - FLAM_C SINE Alu -24 119 1 635 204 21 18 chr10 44744231 44744340 -100844948 - L1MB8 LINE L1 -841 5305 5198 562 207 7 64 chr10 44744340 44744480 -100844808 - FLAM_C SINE Alu 0 133 2 635 204 21 18 chr10 44744480 44744993 -100844295 - L1MB8 LINE L1 -948 5198 4533 14008 217 33 23 chr10 44745121 44745751 -100843537 - L1M4c LINE L1 -744 5638 5015 2166 129 0 3 chr10 44745751 44746062 -100843226 - AluSx SINE Alu -2 310 1 14008 217 33 23 chr10 44746062 44746759 -100842529 - L1M4c LINE L1 -1367 5015 4326 2292 113 33 28 chr10 44746759 44747121 -100842167 - THE1B LTR MaLR 0 364 1 10953 108 7 16 chr10 44747121 44748716 -100840572 - THE1B-int LTR MaLR 0 1580 1 2079 127 44 41 chr10 44748716 44749079 -100840209 - THE1B LTR MaLR 0 364 1 14008 217 33 23 chr10 44749079 44751493 -100837795 - L1M4c LINE L1 -2055 4327 1424 2562 195 88 12 chr10 44751605 44752698 -100836590 + L1MD1 LINE L1 4725 5904 -338 1217 250 106 40 chr10 44752738 44753458 -100835830 + L1MDa LINE L1 1562 2328 -4212 2203 92 0 7 chr10 44753597 44753935 -100835353 + AluSc SINE Alu 1 336 0 251 204 107 10 chr10 44753935 44754038 -100835250 + L1MDa LINE L1 2600 2712 -3828 * 2211 164 15 15 chr10 44754024 44754483 -100834805 + L1MB7 LINE L1 5706 6164 -20 2234 83 7 0 chr10 44754505 44754794 -100834494 + AluSp SINE Alu 1 291 -22 284 209 0 33 chr10 44756414 44756505 -100832783 + MER31-int LTR ERV1 1199 1286 -3650 350 214 61 23 chr10 44756564 44756695 -100832593 + MER31-int LTR ERV1 1311 1446 -3490 1062 81 6 6 chr10 44757007 44757167 -100832121 - LTR7 LTR ERV1 0 450 291 401 74 284 12 chr10 44757164 44757245 -100832043 - LTR7 LTR ERV1 -347 103 1 * 391 250 157 87 chr10 44757426 44757644 -100831644 + MER31-int LTR ERV1 2018 2219 -2717 2079 167 52 21 chr10 44757644 44758063 -100831225 - MSTB1 LTR MaLR 0 432 1 391 250 157 87 chr10 44758063 44758532 -100830756 + MER31-int LTR ERV1 2219 2753 -2183 180 0 0 0 chr10 44758675 44758695 -100830593 + (A)n Simple_repeat Simple_repeat 1 20 0 217 284 21 63 chr10 44758911 44759006 -100830282 + MER5B DNA MER1_type 1 91 -87 22 56 0 0 chr10 44759149 44759185 -100830103 + AT_rich Low_complexity Low_complexity 1 36 0 2482 207 71 95 chr10 44759294 44760274 -100829014 + MER31-int LTR ERV1 3171 4127 -809 26 0 0 0 chr10 44760703 44760729 -100828559 + AT_rich Low_complexity Low_complexity 1 26 0 1527 204 16 33 chr10 44761034 44761402 -100827886 - MLT1A1 LTR MaLR 0 365 4 529 242 249 11 chr10 44762205 44762478 -100826810 - L1MEc LINE L1 -4394 2002 1665 22 0 0 0 chr10 44762478 44762500 -100826788 + AT_rich Low_complexity Low_complexity 1 22 0 555 244 110 18 chr10 44762527 44762855 -100826433 - L1MEc LINE L1 -5043 1353 996 1698 159 40 10 chr10 44762984 44763285 -100826003 - AluJo SINE Alu -2 310 1 447 190 9 24 chr10 44763293 44763417 -100825871 - L1MC3 LINE L1 0 7995 7661 6292 201 45 60 chr10 44763434 44765141 -100824147 - L1PB4 LINE L1 -91 6767 5035 1180 141 11 5 chr10 44765141 44765326 -100823962 + AluJo SINE Alu 118 303 -9 6292 201 45 60 chr10 44765326 44767104 -100822184 - L1PB4 LINE L1 -1823 5035 3255 555 137 16 3 chr10 44767104 44767213 -100822075 - MSTB1 LTR MaLR -1 425 315 1656 238 37 0 chr10 44767265 44767668 -100821620 - L1PB4 LINE L1 -6422 427 10 2596 153 28 8 chr10 44767676 44768173 -100821115 - L1MC3 LINE L1 -90 7695 7189 255 269 13 13 chr10 44768174 44768252 -100821036 - MLT1F1 LTR MaLR -445 122 45 228 158 0 0 chr10 44768253 44768291 -100820997 - L1MC3 LINE L1 -680 7105 7068 1748 173 21 0 chr10 44770243 44770532 -100818756 - AluJo SINE Alu -7 305 11 334 203 0 14 chr10 44770797 44770871 -100818417 - AluJ/FRAM SINE Alu -6 296 224 26 0 0 0 chr10 44771600 44771626 -100817662 + AT_rich Low_complexity Low_complexity 1 26 0 377 325 61 19 chr10 44771666 44771878 -100817410 + L1MC4 LINE L1 7556 7776 -266 470 200 52 7 chr10 44771884 44772019 -100817269 + L1MC4 LINE L1 7901 8041 -1 945 272 248 20 chr10 44772217 44773049 -100816239 + Charlie2a DNA MER1_type 32 1052 -1810 590 271 86 66 chr10 44773529 44773773 -100815515 - MIR SINE MIR 0 262 14 235 378 92 16 chr10 44773843 44774018 -100815270 + L2 LINE L2 2409 2610 -704 1477 199 62 0 chr10 44774018 44774339 -100814949 + MER58B DNA MER1_type 1 341 0 235 378 92 16 chr10 44774339 44774412 -100814876 + L2 LINE L2 2610 2676 -638 2110 165 65 8 chr10 44776069 44776470 -100812818 - MSTA LTR MaLR 0 428 5 184 262 159 41 chr10 44776839 44776984 -100812304 + L3 LINE CR1 1405 1566 -11 2088 122 0 3 chr10 44777009 44777305 -100811983 - AluSx SINE Alu -17 295 1 242 122 0 0 chr10 44777471 44777512 -100811776 + L1MB3 LINE L1 6128 6168 -15 404 237 35 0 chr10 44777551 44777665 -100811623 - L1MEc LINE L1 -2024 4358 4241 915 230 6 0 chr10 44777667 44777845 -100811443 - MLT1B LTR MaLR 0 390 212 2070 251 89 39 chr10 44777845 44779190 -100810098 - L1MEc LINE L1 -3114 3268 1901 279 209 105 0 chr10 44779197 44779283 -100810005 - L1MEc LINE L1 -3732 2650 2556 800 217 50 47 chr10 44779483 44779783 -100809505 - L1MEc LINE L1 -4633 1751 1451 391 127 51 0 chr10 44779784 44779863 -100809425 + T-rich Low_complexity Low_complexity 5 87 0 315 65 0 0 chr10 44779888 44779934 -100809354 + (TCCCC)n Simple_repeat Simple_repeat 3 48 0 1311 183 57 37 chr10 44780234 44780531 -100808757 + Charlie1 DNA MER1_type 2399 2706 -55 2249 95 3 0 chr10 44780531 44780837 -100808451 - AluSq SINE Alu -6 307 1 1311 183 57 37 chr10 44780837 44780888 -100808400 + Charlie1 DNA MER1_type 2706 2754 -7 938 202 24 0 chr10 44781730 44781898 -100807390 + FAM SINE Alu 4 175 0 447 276 191 0 chr10 44781953 44782105 -100807183 + MER5A DNA MER1_type 9 189 0 1307 182 4 0 chr10 44782633 44782864 -100806424 + MER46A DNA MER2_type 1 232 -4 212 293 0 0 chr10 44782913 44782971 -100806317 + L2 LINE L2 3213 3270 -2 2363 77 0 0 chr10 44783078 44783389 -100805899 + AluY SINE Alu 1 311 0 1798 104 0 22 chr10 44784115 44784385 -100804903 - AluSx SINE Alu -14 298 35 1454 176 42 21 chr10 44784482 44784766 -100804522 + AluJo SINE Alu 1 290 -22 850 193 0 7 chr10 44784770 44784910 -100804378 + AluJb SINE Alu 134 272 -40 1765 118 53 118 chr10 44785079 44785495 -100803793 - MLT1B LTR MaLR -1 389 1 182 328 154 40 chr10 44785505 44785752 -100803536 - L2 LINE L2 -652 2662 2388 205 290 15 99 chr10 44786036 44786167 -100803121 + L2 LINE L2 3192 3311 -2 247 268 54 18 chr10 44786596 44786708 -100802580 - MLT1L LTR MaLR -5 610 495 2034 169 47 49 chr10 44786771 44787198 -100802090 - LTR3 LTR ERVK -2 430 5 335 194 15 0 chr10 44787417 44787484 -100801804 - MLT1J LTR MaLR -334 177 110 228 261 58 14 chr10 44788493 44788562 -100800726 + MIR SINE MIR 74 145 -117 1153 118 0 6 chr10 44788564 44788734 -100800554 + AluSx SINE Alu 1 169 -143 2198 94 0 0 chr10 44788851 44789139 -100800149 - AluSg SINE Alu -22 288 1 214 305 133 8 chr10 44790125 44790253 -100799035 + L2 LINE L2 3113 3256 -57 4538 124 51 20 chr10 44791221 44792012 -100797276 - L1MA4A LINE L1 0 6303 5489 9894 178 76 11 chr10 44792130 44792321 -100796967 - L1M2 LINE L1 -4860 1989 1812 1721 151 0 14 chr10 44792321 44792599 -100796689 - AluJo SINE Alu -36 276 3 9894 178 76 11 chr10 44792599 44794275 -100795013 - L1M2 LINE L1 -5037 1812 1 596 222 134 0 chr10 44796185 44796356 -100792932 + Charlie1 DNA MER1_type 55 248 -2513 * 601 186 0 39 chr10 44796332 44796461 -100792827 + Charlie1 DNA MER1_type 2638 2761 0 188 302 0 0 chr10 44796499 44796542 -100792746 - L2 LINE L2 -5 3308 3266 1044 242 194 28 chr10 44798248 44798744 -100790544 + MLT1E2 LTR MaLR 11 588 -38 22 35 0 0 chr10 44798892 44798921 -100790367 + AT_rich Low_complexity Low_complexity 1 29 0 565 209 86 81 chr10 44798942 44798990 -100790298 + MER112 DNA MER1_type 1 47 -213 2727 16 0 0 chr10 44798990 44799299 -100789989 - AluY SINE Alu -2 309 1 565 209 86 81 chr10 44799299 44799460 -100789828 + MER112 DNA MER1_type 47 211 -49 999 269 152 2 chr10 44799752 44800172 -100789116 - L1MC4a LINE L1 -1974 5834 5352 2365 53 0 0 chr10 44805957 44806268 -100783020 + AluSq SINE Alu 1 311 0 217 214 61 143 chr10 44807997 44808095 -100781193 + L2 LINE L2 3217 3306 -7 919 171 11 11 chr10 44810075 44810251 -100779037 + FAM SINE Alu 1 48 -1 709 218 41 12 chr10 44815365 44815535 -100773753 + MER58A DNA MER1_type 47 221 -3 382 269 174 48 chr10 44816104 44816672 -100772616 - L1MC4a LINE L1 -1914 5894 5255 5277 189 66 26 chr10 44816728 44816786 -100772502 - L1MC1 LINE L1 -2 6265 6211 2080 111 86 11 chr10 44816786 44817137 -100772151 + MER51B LTR ERV1 1 377 0 5277 189 66 26 chr10 44817137 44817952 -100771336 - L1MC1 LINE L1 -56 6211 5430 2059 101 28 0 chr10 44817952 44818240 -100771048 - AluSp SINE Alu -13 300 5 5277 189 66 26 chr10 44818240 44818988 -100770300 - L1MC1 LINE L1 -837 5430 4544 2566 36 3 0 chr10 44818988 44819294 -100769994 + AluY SINE Alu 1 307 -4 5277 189 66 26 chr10 44819294 44819800 -100769488 - L1MC1 LINE L1 -1723 4544 4060 534 225 16 8 chr10 44820067 44820196 -100769092 - L1ME2 LINE L1 -10 6154 6025 1503 90 192 8 chr10 44820197 44820452 -100768836 - AluSg SINE Alu -8 302 1 1123 91 0 0 chr10 44820452 44820595 -100768693 - AluSq/x SINE Alu -170 143 1 610 257 64 32 chr10 44820602 44820678 -100768610 - L1MC1 LINE L1 -5520 550 478 1667 195 8 35 chr10 44820678 44821053 -100768235 + MLT1A1 LTR MaLR 1 365 0 610 257 64 32 chr10 44821053 44821163 -100768125 - L1MC1 LINE L1 -5592 478 358 499 276 294 7 chr10 44821221 44821496 -100767792 + LTR16B LTR ERVL 34 387 -77 32 0 0 0 chr10 44821965 44821997 -100767291 + AT_rich Low_complexity Low_complexity 1 32 0 1980 120 3 0 chr10 44822000 44822284 -100767004 - AluSx SINE Alu -27 285 1 201 288 34 0 chr10 44822547 44822606 -100766682 - L2 LINE L2 -215 3057 2997 237 263 50 25 chr10 44822803 44822883 -100766405 - L2 LINE L2 -1 3312 3231 366 252 111 87 chr10 44826477 44826846 -100762442 + MLT1K LTR MaLR 198 575 -13 284 194 56 28 chr10 44827802 44827874 -100761414 - MIR SINE MIR -75 187 114 233 312 27 71 chr10 44828561 44828715 -100760573 + MIR SINE MIR 8 153 -62 227 256 49 12 chr10 44828800 44828882 -100760406 + CT-rich Low_complexity Low_complexity 6 90 0 1364 194 7 19 chr10 44829628 44829937 -100759351 - MER33 DNA MER1_type 0 324 20 380 259 9 18 chr10 44830053 44830165 -100759123 + Charlie8 DNA MER1_type 74 184 -2233 515 304 6 6 chr10 44830428 44830586 -100758702 - MIR SINE MIR -44 218 61 6017 152 42 28 chr10 44830587 44830865 -100758423 + L1PA16 LINE L1 4027 4299 -1867 4513 88 29 3 chr10 44830865 44831482 -100757806 - LTR10E LTR ERV1 0 633 1 6017 152 42 28 chr10 44831482 44831519 -100757769 + L1PA16 LINE L1 4299 4334 -1832 2201 96 7 0 chr10 44831519 44831812 -100757476 - AluSx SINE Alu -17 295 1 6017 152 42 28 chr10 44831812 44833620 -100755668 + L1PA16 LINE L1 4334 6166 0 312 260 127 46 chr10 44833902 44834075 -100755213 - L1ME4a LINE L1 -5 6116 5930 4696 139 11 19 chr10 44834703 44835492 -100753796 + LTR39 LTR ERV1 1 783 0 568 298 5 19 chr10 44835746 44835961 -100753327 - L1ME4a LINE L1 -2339 5469 5258 247 268 82 55 chr10 44836232 44836415 -100752873 - L1ME4a LINE L1 -1154 4992 4805 1109 171 4 40 chr10 44836494 44836722 -100752566 - AluJo SINE Alu -1 311 92 2141 85 0 4 chr10 44837011 44837334 -100751954 + AluSg SINE Alu 1 322 0 279 272 123 55 chr10 44837366 44837675 -100751613 - L1ME4a LINE L1 -1796 4350 4021 230 341 65 29 chr10 44837775 44838021 -100751267 - L1ME4a LINE L1 -2267 3879 3625 425 263 130 68 chr10 44838115 44838236 -100751052 - L1ME4a LINE L1 -2679 3467 3355 968 141 86 18 chr10 44838236 44838399 -100750889 - FAM SINE Alu -1 174 1 425 263 130 68 chr10 44838399 44838576 -100750712 - L1ME4a LINE L1 -2791 3355 3154 400 239 44 35 chr10 44838582 44838695 -100750593 - MIR SINE MIR -116 146 33 393 243 178 40 chr10 44838902 44839054 -100750234 + MIR SINE MIR 28 200 -62 764 282 44 32 chr10 44839056 44839372 -100749916 - MER46C DNA MER2_type -15 323 4 189 191 250 15 chr10 44841751 44841819 -100747469 + MIR3 SINE MIR 118 201 -7 678 251 132 61 chr10 44841869 44842247 -100747041 + MLT1K LTR MaLR 173 577 -11 187 196 278 41 chr10 44842251 44842348 -100746940 + L3 LINE CR1 739 858 -719 184 188 42 42 chr10 44842630 44842678 -100746610 + L3b LINE CR1 1536 1583 0 217 204 176 35 chr10 44845602 44845744 -100743544 + L2 LINE L2 2820 2981 -291 1593 199 24 58 chr10 44845746 44846128 -100743160 + MLT1A2 LTR MaLR 1 369 -5 360 265 0 0 chr10 44848331 44848414 -100740874 + MER5A DNA MER1_type 107 189 0 669 149 64 21 chr10 44849140 44849281 -100740007 - AluJb SINE Alu -26 286 140 222 293 0 0 chr10 44850523 44850581 -100738707 - MIR SINE MIR -63 145 88 230 229 57 29 chr10 44851478 44851548 -100737740 - MER5B DNA MER1_type 0 178 107 190 272 25 62 chr10 44851774 44851855 -100737433 - L2 LINE L2 -5 3267 3190 806 126 24 0 chr10 44851922 44852089 -100737199 + (TCCA)n Simple_repeat Simple_repeat 2 172 0 303 202 28 0 chr10 44852103 44852212 -100737076 + (TCCA)n Simple_repeat Simple_repeat 3 114 0 540 272 19 43 chr10 44852553 44852715 -100736573 + MIR SINE MIR 31 188 -74 21 0 0 0 chr10 44852756 44852777 -100736511 + AT_rich Low_complexity Low_complexity 1 21 0 244 297 148 0 chr10 44852794 44852922 -100736366 - MER5B DNA MER1_type -4 174 28 2235 130 90 3 chr10 44852924 44853292 -100735996 + MER4C LTR ERV1 1 400 -65 14345 49 6 2 chr10 44853292 44855845 -100733443 - L1PA5 LINE L1 -1 6153 3588 207 298 0 0 chr10 44855908 44855955 -100733333 - MER5A DNA MER1_type -88 101 55 482 195 18 35 chr10 44856040 44856153 -100733135 + MIR SINE MIR 65 175 -87 4249 132 13 2 chr10 44857457 44858085 -100731203 + MER41B LTR ERV1 1 635 0 873 104 0 0 chr10 44859248 44859392 -100729896 + (GA)n Simple_repeat Simple_repeat 1 144 0 2119 171 12 57 chr10 44859524 44859946 -100729342 - MER57A LTR ERV1 0 403 1 287 149 0 0 chr10 44859964 44860011 -100729277 - L2 LINE L2 -5 3308 3262 3284 132 8 64 chr10 44860097 44860703 -100728585 + MER4B LTR ERV1 3 574 -36 312 290 56 37 chr10 44860752 44860859 -100728429 + HAL1 LINE L1 1214 1322 -1185 1353 138 157 48 chr10 44860876 44861188 -100728100 + MER4A LTR ERV1 1 346 -318 688 141 190 69 chr10 44861193 44861447 -100727841 + MER4C LTR ERV1 153 446 -19 183 263 0 0 chr10 44861550 44861630 -100727658 + GA-rich Low_complexity Low_complexity 1 80 0 325 315 104 52 chr10 44861966 44862293 -100726995 + L1MC4a LINE L1 4077 4420 -1726 246 317 17 17 chr10 44862298 44862418 -100726870 + L1MC4a LINE L1 4442 4561 -1585 780 241 95 13 chr10 44862619 44862851 -100726437 - MIR SINE MIR -8 254 4 980 144 0 12 chr10 44862986 44863146 -100726142 + FRAM SINE Alu 4 161 -15 398 260 50 112 chr10 44863567 44863907 -100725381 + L1MC4a LINE L1 5508 5788 -333 545 344 64 0 chr10 44863909 44864284 -100725004 + L1ME3A LINE L1 5437 5835 -335 876 286 131 25 chr10 44865541 44866062 -100723226 - L1ME3 LINE L1 -273 5889 5314 370 333 59 12 chr10 44866126 44866381 -100722907 - L1ME3 LINE L1 -930 5216 4950 811 296 68 24 chr10 44866705 44866779 -100722509 + L1ME4a LINE L1 5480 5549 -572 2236 34 0 4 chr10 44866779 44867044 -100722244 - AluY SINE Alu -10 301 38 811 296 68 24 chr10 44867044 44867395 -100721893 + L1ME4a LINE L1 5549 5924 -197 4097 194 20 20 chr10 44867909 44868261 -100721027 - L1MB7 LINE L1 -10 6174 5823 2217 105 3 0 chr10 44868261 44868567 -100720721 - AluSx SINE Alu -4 308 2 4097 194 20 20 chr10 44868567 44869403 -100719885 - L1MB7 LINE L1 -360 5824 4980 3763 176 44 13 chr10 44869407 44870161 -100719127 - L1MB8 LINE L1 0 6178 5402 8004 205 39 21 chr10 44870163 44871485 -100717803 - L1MB8 LINE L1 -789 5357 3988 2052 103 7 10 chr10 44871485 44871785 -100717503 - AluSc SINE Alu -10 299 1 8004 205 39 21 chr10 44871785 44872461 -100716827 - L1MB8 LINE L1 -2158 3988 3325 328 185 192 108 chr10 44873129 44873259 -100716029 - MIR SINE MIR -51 211 71 17428 42 1 1 chr10 44873267 44876158 -100713130 - L1PA5 LINE L1 0 6154 3264 8124 52 0 181 chr10 44876161 44877701 -100711587 - SVA Other Other 0 1386 126 3389 146 41 4 chr10 44878093 44878813 -100710475 - L1PA7 LINE L1 -63 6091 5304 742 234 116 37 chr10 44879750 44880182 -100709106 + L1M4 LINE L1 2760 3225 -2921 888 245 121 36 chr10 44880193 44880614 -100708674 + L1M4 LINE L1 3270 3726 -2420 200 289 58 0 chr10 44881266 44881318 -100707970 - L2 LINE L2 -14 3258 3204 316 239 34 11 chr10 44882085 44882261 -100707027 + CT-rich Low_complexity Low_complexity 1 180 0 1361 124 64 33 chr10 44882692 44883022 -100706266 - SVA Other Other -994 392 53 543 31 0 0 chr10 44883026 44883091 -100706197 + (GGGAGA)n Simple_repeat Simple_repeat 3 67 0 36378 47 31 2 chr10 44883091 44887614 -100701674 - L1P LINE L1 -1490 4656 1 24389 79 37 2 chr10 44887614 44890882 -100698406 - L1P LINE L1 -2753 3393 11 411 294 144 0 chr10 44891479 44891673 -100697615 + MIR SINE MIR 29 250 -12 814 188 79 22 chr10 44891974 44892203 -100697085 - MER5C DNA MER1_type -4 320 79 1442 169 0 40 chr10 44892203 44892391 -100696897 - AluJo SINE Alu 0 321 147 1975 87 0 0 chr10 44892391 44892644 -100696644 - AluY SINE Alu -14 297 45 1442 169 0 40 chr10 44892644 44892767 -100696521 - AluJo SINE Alu -174 147 21 186 284 95 14 chr10 44892768 44892842 -100696446 - MER5C DNA MER1_type -236 88 9 1126 229 156 63 chr10 44893537 44893561 -100695727 + MLT1H1 LTR MaLR 1 21 -534 1822 132 0 14 chr10 44893561 44893874 -100695414 + AluSx SINE Alu 1 309 0 1126 229 156 63 chr10 44893874 44894355 -100694933 + MLT1H1 LTR MaLR 21 554 -1 263 164 209 0 chr10 44894646 44894713 -100694575 + LTR33 LTR ERVL 427 507 -14 231 269 0 0 chr10 44895035 44895087 -100694201 + MIR SINE MIR 113 164 -98 2547 184 54 6 chr10 44896278 44896795 -100692493 + MER34 LTR ERV1 1 542 0 240 285 73 41 chr10 44896842 44896965 -100692323 - L2 LINE L2 0 3272 3146 2121 118 0 0 chr10 44897752 44898048 -100691240 - AluSx SINE Alu -16 296 1 304 300 150 7 chr10 44898840 44898980 -100690308 + MIR SINE MIR 32 191 -71 217 202 96 85 chr10 44900287 44900381 -100688907 - MIR SINE MIR -112 150 56 201 333 0 41 chr10 44901082 44901229 -100688059 + G-rich Low_complexity Low_complexity 3 143 0 257 245 0 0 chr10 44903296 44903349 -100685939 - L2 LINE L2 -10 3262 3210 248 246 209 0 chr10 44903681 44903791 -100685497 - MIR SINE MIR -55 153 21 22 56 0 0 chr10 44904169 44904205 -100685083 + GC_rich Low_complexity Low_complexity 1 36 0 342 0 0 0 chr10 44904570 44904608 -100684680 + (CCCCCG)n Simple_repeat Simple_repeat 6 43 0 4476 208 50 84 chr10 44905558 44906429 -100682859 - L1M4 LINE L1 -748 5398 4485 602 173 0 27 chr10 44906429 44906539 -100682749 - AluSg/x SINE Alu -13 299 193 4476 208 50 84 chr10 44906539 44907065 -100682223 - L1M4 LINE L1 -1661 4485 3943 5300 166 18 33 chr10 44907144 44907391 -100681897 - L1MA9 LINE L1 -22 7709 7460 1488 180 48 20 chr10 44907391 44907685 -100681603 - AluJb SINE Alu -10 302 1 5300 166 18 33 chr10 44907685 44908858 -100680430 - L1MA9 LINE L1 -271 7460 6318 6080 182 27 10 chr10 44908868 44910112 -100679176 - L1MA9 LINE L1 -1737 5828 4563 42480 48 25 1 chr10 44910533 44916547 -100672741 - L1PA6 LINE L1 0 6154 1 21710 123 12 18 chr10 44916547 44919950 -100669338 - L1P LINE L1 -2753 3393 11 4326 184 26 15 chr10 44919958 44921614 -100667674 - L1MA9 LINE L1 -2984 4581 2907 5784 225 48 51 chr10 44921639 44923316 -100665972 - L1M4b LINE L1 -5179 1680 10 870 227 0 0 chr10 44923564 44923736 -100665552 - MLT2C1 LTR ERVL -225 172 1 353 300 82 86 chr10 44923812 44924092 -100665196 + L2 LINE L2 2934 3212 -60 2623 126 63 0 chr10 44924842 44925272 -100664016 - L1MA4A LINE L1 -6 6297 5841 195 284 47 55 chr10 44925865 44925992 -100663296 + L2 LINE L2 3126 3251 -62 1323 57 15 21 chr10 44926036 44926333 -100662955 + (TTTC)n Simple_repeat Simple_repeat 1 536 0 2441 90 3 0 chr10 44926333 44926645 -100662643 - AluSq SINE Alu 0 610 1 360 240 50 30 chr10 44926662 44926762 -100662526 - MIR SINE MIR -38 224 123 553 320 6 6 chr10 44926982 44927138 -100662150 - MIR SINE MIR -90 172 17 8019 33 0 38 chr10 44927949 44929489 -100659799 - L1PA4 LINE L1 -3 6152 4643 5723 126 31 26 chr10 44929502 44931799 -100657489 - SVA Other Other -838 1384 435 507 33 0 0 chr10 44932053 44932114 -100657174 + (GGGAGA)n Simple_repeat Simple_repeat 1 61 0 36990 62 2 0 chr10 44932114 44936755 -100652533 - L1P LINE L1 -1490 4656 7 32734 85 17 13 chr10 44936763 44939856 -100649432 - HERVL LTR ERVL -1131 4523 1294 196 200 113 113 chr10 44939856 44939971 -100649317 - MER5B DNA MER1_type -2 176 62 32734 85 17 13 chr10 44939971 44941270 -100648018 - HERVL LTR ERVL -4360 1294 1 3374 86 2 9 chr10 44941273 44941713 -100647575 - MLT2A1 LTR ERVL -7 437 1 349 276 17 9 chr10 44942081 44942197 -100647091 - HAL1b LINE L1 -804 544 428 3220 172 16 18 chr10 44942361 44942972 -100646316 - L1MD1 LINE L1 -274 5968 5359 418 192 10 10 chr10 44942974 44943073 -100646215 + L1MA4 LINE L1 5952 6050 -250 2069 110 11 0 chr10 44943088 44943361 -100645927 + AluSx SINE Alu 2 277 -35 228 121 0 0 chr10 44943361 44943427 -100645861 + Alu SINE Alu 251 316 0 2716 198 148 24 chr10 44943436 44944150 -100645138 - MER109 Unknown Unknown -5 2427 1625 24983 105 78 141 chr10 44944151 44946380 -100642908 + L1PA7 LINE L1 2 2369 -3785 299 25 25 0 chr10 44946380 44946420 -100642868 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 24983 105 78 141 chr10 44946420 44947280 -100642008 + L1PA7 LINE L1 2369 3281 -2873 6046 33 1 8 chr10 44947280 44948161 -100641127 + SVA Other Other 1 1386 0 24983 105 78 141 chr10 44948161 44951046 -100638242 + L1PA7 LINE L1 3281 5593 -561 1636 97 5 5 chr10 44951170 44951387 -100637901 + L1PA7 LINE L1 5938 6154 0 6472 150 34 24 chr10 44951415 44952566 -100636722 - MER109 Unknown Unknown -792 1640 479 1668 143 65 19 chr10 44952570 44952877 -100636411 - L1MB3 LINE L1 -289 5894 5574 227 208 83 67 chr10 44953122 44953242 -100636046 + L1MC/D LINE L1 5339 5460 -2348 398 212 93 53 chr10 44953367 44953450 -100635838 - HAL1b LINE L1 -575 773 680 2261 107 0 0 chr10 44953450 44953740 -100635548 - AluSc SINE Alu -19 290 1 398 212 93 53 chr10 44953740 44953807 -100635481 - HAL1b LINE L1 -668 680 617 7259 234 64 20 chr10 44953934 44956088 -100633200 - L1MEc LINE L1 -1797 4418 2146 2333 86 0 7 chr10 44956088 44956389 -100632899 - AluY SINE Alu -10 301 3 7259 234 64 20 chr10 44956389 44956635 -100632653 - L1MEc LINE L1 -4069 2146 1912 21 36 0 0 chr10 44956649 44956677 -100632611 + AT_rich Low_complexity Low_complexity 1 28 0 6355 180 10 11 chr10 44956897 44958309 -100630979 + L1PA16 LINE L1 4028 5435 -731 1856 146 29 0 chr10 44958309 44958590 -100630698 + AluSx SINE Alu 11 299 -13 6355 180 10 11 chr10 44958590 44958985 -100630303 + L1PA16 LINE L1 5435 5829 -337 8119 29 0 0 chr10 44958985 44960957 -100628331 + L1PA4 LINE L1 4582 6554 0 180 97 0 0 chr10 44960970 44961001 -100628287 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 8393 224 69 71 chr10 44961065 44962794 -100626494 - L1P5 LINE L1 -624 5766 4035 953 190 0 0 chr10 44962794 44962952 -100626336 - AluSg/x SINE Alu -18 294 137 8393 224 69 71 chr10 44962952 44963665 -100625623 - L1P5 LINE L1 -2355 4035 3322 767 171 0 50 chr10 44963665 44963805 -100625483 - FLAM_C SINE Alu 0 133 1 8393 224 69 71 chr10 44963805 44965522 -100623766 - L1P5 LINE L1 -3068 3322 1407 2019 245 84 28 chr10 44965526 44966274 -100623014 - L1MEc LINE L1 -4677 1719 916 1255 154 30 0 chr10 44966274 44966475 -100622813 - L1PA14 LINE L1 0 6161 5955 2019 245 84 28 chr10 44966475 44966582 -100622706 - L1MEc LINE L1 -5480 916 816 481 269 26 64 chr10 44967465 44967621 -100621667 + MLT1J1 LTR MaLR 1 150 -296 387 316 33 20 chr10 44968121 44968273 -100621015 - MIR SINE MIR -60 202 49 262 269 77 58 chr10 44968500 44968604 -100620684 - MIR SINE MIR -137 125 20 285 266 69 68 chr10 44969751 44969910 -100619378 + MIR3 SINE MIR 23 188 -20 2554 40 3 0 chr10 44971651 44971947 -100617341 - AluY SINE Alu -14 297 1 24 0 0 0 chr10 44972733 44972757 -100616531 + AT_rich Low_complexity Low_complexity 1 24 0 261 270 127 57 chr10 44972802 44972880 -100616408 - L1ME4a LINE L1 -188 5933 5862 1710 124 12 16 chr10 44972880 44973137 -100616151 - AluSx SINE Alu -22 290 35 261 270 127 57 chr10 44973137 44973570 -100615718 - L1ME4a LINE L1 -259 5862 5310 6713 106 72 19 chr10 44975559 44976591 -100612697 - THE1B-int LTR MaLR -494 1086 1 2226 133 64 9 chr10 44976591 44976936 -100612352 - THE1B LTR MaLR 0 364 1 262 179 45 15 chr10 44977205 44977272 -100612016 + MLT1B LTR MaLR 319 387 -3 2223 123 3 24 chr10 44977979 44978313 -100610975 - MER4D LTR ERV1 0 872 546 1483 111 22 4 chr10 44978332 44978557 -100610731 + MER41B LTR ERV1 1 229 -406 3718 122 0 2 chr10 44978657 44979183 -100610105 + HERVK3 LTR ERVK 6717 7241 -2 3197 103 0 31 chr10 44979185 44979631 -100609657 + LTR3 LTR ERVK 1 432 0 1158 148 129 23 chr10 44979631 44979848 -100609440 - LTR19A-int LTR ERV1 -5346 240 1 3421 77 97 0 chr10 44979848 44980291 -100608997 - LTR19A LTR ERV1 0 486 1 502 269 0 8 chr10 44980291 44980425 -100608863 + PABL_B LTR ERV1 42 174 -493 28808 123 24 67 chr10 44980924 44986038 -100603250 + L1PA8 LINE L1 4 4773 -1399 2099 145 0 3 chr10 44986038 44986349 -100602939 + AluSg SINE Alu 1 310 0 28808 123 24 67 chr10 44986349 44987688 -100601600 + L1PA8 LINE L1 4773 6168 -4 761 279 140 60 chr10 44989800 44990536 -100598752 + LTR50 LTR ERVL 1 795 0 4476 94 0 0 chr10 44990987 44991541 -100597747 + MER41A LTR ERV1 1 554 0 24639 132 13 4 chr10 44992184 44995896 -100593392 - HERVK3 LTR ERVK -1905 5338 1593 816 174 8 0 chr10 44995886 44996018 -100593270 - HERVK3 LTR ERVK -3825 3418 3286 * 7031 206 11 11 chr10 44996014 44997525 -100591763 - HERVK3 LTR ERVK -5656 1587 40 2550 92 6 0 chr10 44997525 44997861 -100591427 - LTR3 LTR ERVK 0 432 95 974 53 23 0 chr10 44997864 44997997 -100591291 + LTR19-int LTR ERV1 2122 2257 -3329 456 171 159 0 chr10 44997997 44998085 -100591203 - LTR8 LTR ERV1 -434 257 156 10753 89 22 35 chr10 44998085 44999605 -100589683 + LTR19A-int LTR ERV1 2346 3884 -1702 4603 43 0 4 chr10 44999605 45000136 -100589152 - L1PA4 LINE L1 -4 6151 5623 10753 89 22 35 chr10 45000136 45000905 -100588383 + LTR19A-int LTR ERV1 3884 4528 -1058 2178 114 0 0 chr10 45000905 45001195 -100588093 - AluY SINE Alu -21 290 1 10753 89 22 35 chr10 45001195 45001286 -100588002 + LTR19A-int LTR ERV1 4528 4619 -967 5567 73 47 0 chr10 45001285 45002013 -100587275 + LTR19A-int LTR ERV1 4824 5585 -1 * 1458 92 70 22 chr10 45002014 45002242 -100587046 + LTR19A LTR ERV1 1 239 -247 792 49 10 0 chr10 45002223 45002325 -100586963 + LTR19A LTR ERV1 384 486 0 * 988 120 28 114 chr10 45002325 45002575 -100586713 - MER4A LTR ERV1 -117 547 261 577 143 10 10 chr10 45002575 45002673 -100586615 - MER4A LTR ERV1 -566 98 1 4511 196 65 14 chr10 45002888 45004112 -100585176 - L1MD1 LINE L1 0 6242 4939 336 111 0 0 chr10 45004112 45004166 -100585122 + (TG)n Simple_repeat Simple_repeat 1 54 0 4511 196 65 14 chr10 45004166 45004200 -100585088 - L1MD1 LINE L1 -1303 4939 4908 3763 152 7 16 chr10 45004192 45004870 -100584418 - L1 LINE L1 -1965 5600 4929 * 36412 102 10 11 chr10 45004862 45011033 -100578255 - L1PA6 LINE L1 0 6154 11 2389 277 50 21 chr10 45011046 45012539 -100576749 - L1M1 LINE L1 -4161 3405 1985 317 329 32 52 chr10 45013387 45013542 -100575746 - L1M1 LINE L1 -5981 1515 1364 966 157 43 27 chr10 45013606 45013791 -100575497 - L1MB5 LINE L1 0 6174 5987 723 181 19 19 chr10 45013791 45013951 -100575337 + L1M4 LINE L1 5627 5786 -388 3405 98 33 12 chr10 45014377 45014856 -100574432 - LTR15 LTR ERV1 -4 489 1 8846 40 15 208 chr10 45015848 45017559 -100571729 - SVA Other Other -4 1382 1 207 0 0 0 chr10 45017760 45017783 -100571505 + (GGGAGA)n Simple_repeat Simple_repeat 6 28 0 2295 101 3 25 chr10 45019736 45020052 -100569236 + AluSg SINE Alu 1 309 -1 2634 190 31 45 chr10 45021616 45022170 -100567118 + L1MDa LINE L1 900 1445 -5095 2058 152 0 7 chr10 45022170 45022480 -100566808 + AluSx SINE Alu 1 308 -4 2634 190 31 45 chr10 45022480 45022566 -100566722 + L1MDa LINE L1 1445 1531 -5009 1227 210 43 113 chr10 45022619 45023158 -100566130 + L1MDa LINE L1 2852 3352 -3188 331 125 0 0 chr10 45023227 45023275 -100566013 - L1M1 LINE L1 -6636 929 882 472 213 139 0 chr10 45023278 45023386 -100565902 - L1 LINE L1 -7223 342 220 * 3144 204 41 13 chr10 45023357 45023993 -100565295 - L1M1 LINE L1 -6900 665 12 * 4099 243 67 12 chr10 45023990 45024887 -100564401 - L1M4 LINE L1 -1653 4493 3494 2107 121 31 0 chr10 45024887 45025176 -100564112 - AluSc SINE Alu -11 298 1 4099 243 67 12 chr10 45025176 45025635 -100563653 - L1M4 LINE L1 -2652 3494 3062 2060 106 63 22 chr10 45025639 45026006 -100563282 + L1M1 LINE L1 3229 3610 -3955 3330 97 0 0 chr10 45026011 45026443 -100562845 + L1P LINE L1 9 440 -5706 827 138 38 69 chr10 45026449 45026609 -100562679 + AluSg/x SINE Alu 139 293 -17 820 93 0 8 chr10 45027018 45027136 -100562152 + AluSp/q SINE Alu 197 364 0 301 137 0 0 chr10 45027136 45027187 -100562101 + (A)n Simple_repeat Simple_repeat 1 180 0 1937 55 4 16 chr10 45027195 45027452 -100561836 + AluY SINE Alu 56 309 -2 564 286 202 35 chr10 45027530 45028313 -100560975 - L2 LINE L2 -9 3304 2369 544 239 56 35 chr10 45028342 45028484 -100560804 - L2 LINE L2 -1 3312 3168 1190 146 58 39 chr10 45028487 45028693 -100560595 + AluJo SINE Alu 87 296 -16 221 210 37 25 chr10 45028695 45028776 -100560512 - L2 LINE L2 -151 3162 3081 1097 151 18 0 chr10 45028812 45028978 -100560310 - AluSg/x SINE Alu -13 297 129 954 268 130 22 chr10 45028978 45029439 -100559849 - L2 LINE L2 -281 3032 2541 181 335 94 47 chr10 45030593 45030763 -100558525 - MER5A DNA MER1_type -5 184 7 2025 115 14 4 chr10 45030903 45031217 -100558071 + AluSx SINE Alu 1 317 0 2092 80 90 14 chr10 45031220 45031508 -100557780 + AluY SINE Alu 1 310 -1 195 281 157 26 chr10 45031556 45031709 -100557579 - L2 LINE L2 -1007 2307 2135 450 200 0 0 chr10 45034258 45034348 -100554940 - L1MB8 LINE L1 -6 6172 6083 244 301 43 11 chr10 45034763 45034856 -100554432 + MIR3 SINE MIR 83 178 -30 438 324 51 34 chr10 45035293 45035469 -100553819 - L2 LINE L2 -99 3173 2995 2186 117 3 0 chr10 45038998 45039298 -100549990 - AluSx SINE Alu -11 301 1 197 298 53 75 chr10 45039783 45039877 -100549411 - MIR3 SINE MIR -1 207 117 1802 167 25 0 chr10 45039877 45040159 -100549129 + AluSx SINE Alu 1 289 -23 197 298 53 75 chr10 45040159 45040252 -100549036 - MIR3 SINE MIR -91 117 24 199 70 23 23 chr10 45040622 45040665 -100548623 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 2425 80 0 0 chr10 45041270 45041569 -100547719 - AluSq SINE Alu -14 299 1 332 310 35 23 chr10 45041703 45041874 -100547414 + MER5B DNA MER1_type 2 174 -4 2094 106 4 0 chr10 45042116 45042390 -100546898 + AluSx SINE Alu 14 288 -24 28 0 0 0 chr10 45042519 45042547 -100546741 + AT_rich Low_complexity Low_complexity 1 28 0 490 313 40 5 chr10 45042668 45042892 -100546396 - L1ME4a LINE L1 -219 5902 5671 314 235 37 81 chr10 45043125 45043261 -100546027 - MIR SINE MIR -39 223 94 242 154 15 77 chr10 45043575 45043640 -100545648 + (CATA)n Simple_repeat Simple_repeat 2 62 0 195 139 0 0 chr10 45043690 45043726 -100545562 + (TATG)n Simple_repeat Simple_repeat 3 38 0 416 314 0 25 chr10 45044177 45044298 -100544990 + L2 LINE L2 3195 3312 -1 847 184 0 38 chr10 45044566 45044751 -100544537 - L1MB8 LINE L1 -21 6157 5980 2029 152 0 0 chr10 45045100 45045397 -100543891 + AluSx SINE Alu 1 297 -15 1684 167 14 17 chr10 45045555 45045843 -100543445 + AluJo SINE Alu 1 287 -25 622 255 159 0 chr10 45046051 45046259 -100543029 + MIR SINE MIR 21 261 -1 6434 168 6 30 chr10 45046562 45047714 -100541574 - MSTB-int LTR MaLR -526 1125 1 2888 138 12 14 chr10 45047714 45048141 -100541147 - MSTB LTR MaLR 0 426 1 981 107 0 7 chr10 45048573 45048713 -100540575 + AluSg/x SINE Alu 167 305 -7 583 289 117 20 chr10 45048745 45049043 -100540245 + L3 LINE CR1 686 1012 -565 25 31 0 0 chr10 45049128 45049160 -100540128 + AT_rich Low_complexity Low_complexity 1 32 0 316 221 70 12 chr10 45049408 45049494 -100539794 - L2 LINE L2 0 3313 3223 960 197 212 7 chr10 45049723 45049997 -100539291 + MER21B LTR ERV1 523 852 -11 252 185 86 37 chr10 45050510 45050591 -100538697 + HAL1 LINE L1 958 1042 -1465 829 217 79 25 chr10 45050591 45050831 -100538457 + MLT1B LTR MaLR 127 379 -11 1317 214 117 32 chr10 45051029 45051472 -100537816 + L1MC4 LINE L1 7144 7624 -418 257 361 73 80 chr10 45052978 45053377 -100535911 + L2 LINE L2 2872 3267 -5 1775 159 3 14 chr10 45054456 45054751 -100534537 - AluJo SINE Alu -15 297 6 382 248 111 76 chr10 45055173 45055433 -100533855 + MIR SINE MIR 3 260 -2 898 209 62 19 chr10 45055723 45055933 -100533355 + AluJo SINE Alu 82 300 -12 2348 99 0 13 chr10 45056439 45056751 -100532537 - AluSx SINE Alu -4 308 1 775 179 113 0 chr10 45057383 45057551 -100531737 + MIR SINE MIR 74 260 -2 552 200 36 9 chr10 45057554 45057664 -100531624 - Tigger3(Golem) DNA MER2_type -1 3028 2916 1304 185 50 0 chr10 45057777 45058015 -100531273 - AluJb SINE Alu -23 289 40 2177 102 26 10 chr10 45058529 45058833 -100530455 - AluSq SINE Alu -4 309 1 2009 156 0 3 chr10 45059610 45059917 -100529371 + AluSx SINE Alu 1 306 -6 700 260 115 0 chr10 45060084 45060284 -100529004 - MIR SINE MIR -23 239 17 10131 217 75 63 chr10 45060965 45061140 -100528148 - L1MC2 LINE L1 -1 6623 6452 1514 114 0 23 chr10 45061140 45061359 -100527929 - AluSg/x SINE Alu -13 297 84 10131 217 75 63 chr10 45061359 45064337 -100524951 - L1MC2 LINE L1 -172 6452 3512 250 58 500 0 chr10 45064337 45064389 -100524899 - MADE1 DNA Mariner -2 78 1 10131 217 75 63 chr10 45064389 45064466 -100524822 - L1MC2 LINE L1 -3112 3512 3437 2363 84 0 0 chr10 45064466 45064765 -100524523 - AluY SINE Alu -12 299 1 10131 217 75 63 chr10 45064765 45065809 -100523479 - L1MC2 LINE L1 -3187 3437 2407 2311 83 0 7 chr10 45065809 45066097 -100523191 - AluY SINE Alu -25 286 1 10131 217 75 63 chr10 45066097 45068314 -100520974 - L1MC2 LINE L1 -4217 2407 6 1632 106 17 4 chr10 45068821 45069057 -100520231 - THE1C LTR MaLR 0 375 137 2091 255 114 11 chr10 45069236 45070167 -100519121 + L1MC/D LINE L1 4472 5482 -745 297 51 0 0 chr10 45070288 45070327 -100518961 + (TATG)n Simple_repeat Simple_repeat 2 40 0 341 194 0 0 chr10 45070388 45070455 -100518833 + L1MC/D LINE L1 5463 5529 -804 1186 229 4 8 chr10 45070466 45070711 -100518577 - AluJo SINE Alu -68 244 1 1321 209 13 49 chr10 45071888 45072195 -100517093 - AluSg SINE Alu -2 298 3 430 171 24 0 chr10 45072413 45072495 -100516793 - AluY SINE Alu -232 86 3 290 53 0 0 chr10 45074057 45074095 -100515193 - L1PA12 LINE L1 -351 5817 5780 2344 125 0 12 chr10 45074095 45074431 -100514857 + L1PA12 LINE L1 5830 6168 0 2610 230 61 17 chr10 45074824 45075787 -100513501 + L1ME LINE L1 4472 5481 -745 331 237 13 0 chr10 45075978 45076054 -100513234 + L1ME LINE L1 5463 5539 -794 1055 257 4 8 chr10 45076055 45076300 -100512988 - AluJo SINE Alu -68 244 1 26 0 0 0 chr10 45077487 45077513 -100511775 + AT_rich Low_complexity Low_complexity 1 26 0 687 139 16 8 chr10 45077513 45077609 -100511679 - AluSx SINE Alu -2 310 188 806 125 0 0 chr10 45077609 45077721 -100511567 - AluSx SINE Alu -201 112 1 362 263 137 29 chr10 45077837 45078042 -100511246 - L1MC5 LINE L1 -20 7941 7715 3928 126 20 0 chr10 45078065 45078676 -100510612 - L1PA11 LINE L1 0 6174 5552 309 26 0 0 chr10 45080150 45080188 -100509100 + (CCCCAG)n Simple_repeat Simple_repeat 1 38 0 293 338 49 7 chr10 45081632 45081774 -100507514 + L2 LINE L2 2722 2869 -445 2863 13 0 0 chr10 45082378 45082691 -100506597 + AluYb8 SINE Alu 1 313 -5 6641 75 32 0 chr10 45084236 45085105 -100504183 + MER11D LTR ERVK 1 897 0 38 22 0 0 chr10 45085187 45085232 -100504056 + AT_rich Low_complexity Low_complexity 1 45 0 270 344 32 5 chr10 45085372 45085593 -100503695 + L1ME LINE L1 5510 5736 -385 995 158 0 13 chr10 45086187 45086339 -100502949 - AluSq/x SINE Alu -162 150 1 267 299 149 8 chr10 45087152 45087286 -100502002 + L2 LINE L2 2946 3098 -215 325 312 74 26 chr10 45087711 45087900 -100501388 - MIR SINE MIR -56 206 9 203 347 96 41 chr10 45089425 45089791 -100499497 - L2 LINE L2 -339 2975 2590 2441 97 0 0 chr10 45090218 45090528 -100498760 + AluSg SINE Alu 1 310 0 2027 47 0 0 chr10 45091417 45091652 -100497636 - AluY SINE Alu 0 311 77 25 65 0 0 chr10 45091710 45091756 -100497532 + AT_rich Low_complexity Low_complexity 1 46 0 636 261 50 0 chr10 45092020 45092219 -100497069 - L1MA4 LINE L1 -4 6296 6088 33 25 0 0 chr10 45092305 45092345 -100496943 + AT_rich Low_complexity Low_complexity 1 40 0 2281 89 6 32 chr10 45093401 45093716 -100495572 + AluSc SINE Alu 1 307 -2 35 0 0 0 chr10 45093727 45093762 -100495526 + AT_rich Low_complexity Low_complexity 1 35 0 2153 98 17 0 chr10 45094455 45094582 -100494706 + AluY SINE Alu 1 124 -187 248 0 0 30 chr10 45094582 45094615 -100494673 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 2153 98 17 0 chr10 45094615 45094774 -100494514 + AluY SINE Alu 124 292 -19 2091 122 3 0 chr10 45096078 45096373 -100492915 + AluSx SINE Alu 1 296 -16 44 35 0 0 chr10 45098299 45098357 -100490931 + AT_rich Low_complexity Low_complexity 1 58 0 368 250 13 40 chr10 45098492 45098644 -100490644 - MER104 DNA Tc2 -30 150 3 545 301 85 44 chr10 45098733 45098991 -100490297 - MIR SINE MIR 0 262 2 264 311 19 0 chr10 45100049 45100155 -100489133 + MER102a DNA MER1_type 222 329 -1 22 70 0 0 chr10 45100210 45100253 -100489035 + AT_rich Low_complexity Low_complexity 1 43 0 224 355 92 0 chr10 45101164 45101240 -100488048 - L2 LINE L2 -50 3222 3140 26 30 0 0 chr10 45101651 45101684 -100487604 + AT_rich Low_complexity Low_complexity 1 33 0 2001 143 0 14 chr10 45101974 45102268 -100487020 + AluSx SINE Alu 2 291 -21 23 78 0 0 chr10 45102399 45102450 -100486838 + AT_rich Low_complexity Low_complexity 1 51 0 213 347 91 25 chr10 45102535 45102734 -100486554 + MIR SINE MIR 20 231 -31 621 181 0 0 chr10 45104522 45104627 -100484661 + U6 snRNA snRNA 1 105 -2 21 36 0 0 chr10 45105062 45105090 -100484198 + AT_rich Low_complexity Low_complexity 1 28 0 869 142 0 0 chr10 45105243 45105370 -100483918 - FLAM_C SINE Alu -16 127 1 36 40 0 0 chr10 45106346 45106396 -100482892 + AT_rich Low_complexity Low_complexity 1 50 0 1872 224 37 10 chr10 45106504 45106995 -100482293 - LTR22 LTR ERVK -5 504 1 2174 83 55 3 chr10 45107220 45107509 -100481779 - AluSg SINE Alu -6 304 1 28 0 0 0 chr10 45107905 45107933 -100481355 + AT_rich Low_complexity Low_complexity 1 28 0 1409 150 52 17 chr10 45108382 45108615 -100480673 + AluJo SINE Alu 57 297 -15 213 235 0 0 chr10 45110800 45110851 -100478437 + L2 LINE L2 3190 3240 -73 1964 146 3 10 chr10 45111291 45111592 -100477696 + AluJb SINE Alu 1 299 -13 291 300 18 27 chr10 45111611 45111721 -100477567 + MER5B DNA MER1_type 1 109 -69 359 316 90 30 chr10 45112314 45112548 -100476740 - MIR SINE MIR 0 262 15 703 253 169 17 chr10 45113446 45113910 -100475378 - L2 LINE L2 0 3313 2755 1696 211 69 26 chr10 45113913 45114377 -100474911 + MLT1D LTR MaLR 22 505 0 1604 253 67 76 chr10 45114378 45114426 -100474862 - L2 LINE L2 -556 2758 2711 1684 199 0 14 chr10 45114426 45114723 -100474565 - AluJo SINE Alu -19 293 1 1604 253 67 76 chr10 45114723 45115345 -100473943 - L2 LINE L2 -603 2711 2094 276 225 56 22 chr10 45116651 45116740 -100472548 + MIR SINE MIR 1 92 -170 420 312 109 26 chr10 45116849 45117115 -100472173 + L1 LINE L1 2540 2827 -3319 4019 69 11 117 chr10 45117322 45118016 -100471272 - L1PB1 LINE L1 0 6151 5531 2247 131 0 0 chr10 45118033 45118345 -100470943 - AluSq SINE Alu -1 312 1 1048 115 27 0 chr10 45118347 45118530 -100470758 + L1MA5 LINE L1 6112 6299 -1 347 328 0 0 chr10 45118534 45118662 -100470626 + L1 LINE L1 2947 3074 -3072 1736 111 14 34 chr10 45119115 45119412 -100469876 - MER47A DNA MER2_type 0 366 76 2042 133 28 0 chr10 45119479 45119765 -100469523 + AluSq SINE Alu 1 294 -19 208 167 19 19 chr10 45119802 45119856 -100469432 + (TA)n Simple_repeat Simple_repeat 1 54 0 414 222 146 35 chr10 45119882 45120053 -100469235 - L2 LINE L2 -50 3263 3074 401 250 125 8 chr10 45120590 45120718 -100468570 + MIR SINE MIR 105 247 -15 3538 58 40 8 chr10 45120732 45121232 -100468056 - LTR61 LTR ERV1 -1 594 79 2783 94 3 0 chr10 45123343 45123706 -100465582 - THE1B LTR MaLR 0 364 1 1581 174 16 23 chr10 45124548 45124852 -100464436 - AluJo SINE Alu -10 302 1 305 297 120 56 chr10 45125490 45125847 -100463441 + L1MDa LINE L1 676 1055 -5064 560 310 81 45 chr10 45125893 45126354 -100462934 + L1MDa LINE L1 1174 1598 -892 22 0 0 0 chr10 45126462 45126484 -100462804 + AT_rich Low_complexity Low_complexity 1 22 0 451 287 70 42 chr10 45126784 45126819 -100462469 + L1MDa LINE L1 2069 2102 -4027 2261 116 10 3 chr10 45126819 45127129 -100462159 + AluSx SINE Alu 1 312 0 451 287 70 42 chr10 45127129 45127243 -100462045 + L1MDa LINE L1 2102 2211 -3918 1581 197 16 3 chr10 45127243 45127547 -100461741 + AluJo SINE Alu 1 308 -4 451 287 70 42 chr10 45127547 45127729 -100461559 + L1MDa LINE L1 2211 2379 -3750 795 290 113 54 chr10 45127743 45128449 -100460839 + L1MDa LINE L1 2633 3380 -2749 858 66 8 0 chr10 45128513 45128635 -100460653 - MSTA LTR MaLR -305 123 1 265 285 73 42 chr10 45128635 45128993 -100460295 + L1MDa LINE L1 3407 3775 -2354 1879 100 0 15 chr10 45129003 45129263 -100460025 + AluSx SINE Alu 56 311 -1 25 0 0 0 chr10 45129281 45129306 -100459982 + AT_rich Low_complexity Low_complexity 1 25 0 298 310 41 14 chr10 45129424 45129569 -100459719 + L1MDa LINE L1 4082 4230 -1899 1044 252 75 65 chr10 45129636 45130263 -100459025 - L1ME LINE L1 -4448 1813 1181 1384 165 77 12 chr10 45130281 45130529 -100458759 - AluJb SINE Alu -14 298 35 2090 274 73 13 chr10 45130551 45131510 -100457778 - L1ME LINE L1 -4963 1089 106 22 56 0 0 chr10 45131818 45131854 -100457434 + AT_rich Low_complexity Low_complexity 1 36 0 289 280 91 6 chr10 45131874 45132049 -100457239 + L1MDa LINE L1 4481 4670 -1459 282 278 75 42 chr10 45132116 45132447 -100456841 + L1MDa LINE L1 4774 5115 -1014 325 348 71 74 chr10 45132723 45133062 -100456226 + L2 LINE L2 2918 3255 -17 497 175 10 0 chr10 45133103 45133206 -100456082 + GA-rich Low_complexity Low_complexity 4 107 0 183 80 0 0 chr10 45133669 45133694 -100455594 + (CA)n Simple_repeat Simple_repeat 2 26 0 542 262 13 27 chr10 45133904 45134053 -100455235 - MIR SINE MIR 0 262 116 1012 120 21 0 chr10 45134856 45135030 -100454258 + L1MA3 LINE L1 6115 6301 -4 214 311 78 10 chr10 45135473 45135576 -100453712 + MIR SINE MIR 59 168 -94 259 276 11 23 chr10 45135699 45135786 -100453502 - MIR3 SINE MIR -3 205 120 448 284 114 28 chr10 45136287 45136541 -100452747 - L3 LINE CR1 -1 1576 1301 1634 219 43 29 chr10 45136556 45137041 -100452247 + MER74B LTR ERVL 58 549 -73 636 175 0 0 chr10 45137087 45137184 -100452104 + FLAM_C SINE Alu 29 125 -18 1440 147 0 30 chr10 45137191 45137450 -100451838 + AluSg SINE Alu 59 310 0 489 358 82 24 chr10 45137500 45137877 -100451411 - L3 LINE CR1 -376 1201 803 661 189 16 8 chr10 45137920 45138047 -100451241 - AluJo SINE Alu -178 134 7 412 290 177 11 chr10 45138101 45138287 -100451001 - MIR SINE MIR 0 262 46 341 286 214 19 chr10 45138437 45138643 -100450645 - L3 LINE CR1 -822 755 510 195 292 42 31 chr10 45138735 45138831 -100450457 - L3 LINE CR1 -1106 471 375 210 91 0 0 chr10 45139546 45139579 -100449709 + (A)n Simple_repeat Simple_repeat 1 33 0 207 204 0 0 chr10 45141276 45141320 -100447968 + (TATATG)n Simple_repeat Simple_repeat 4 47 0 220 208 75 0 chr10 45142432 45142485 -100446803 - L2 LINE L2 0 3313 3257 703 119 0 2 chr10 45142557 45142792 -100446496 + AluSx SINE Alu 1 283 -27 772 193 0 21 chr10 45142827 45142972 -100446316 + AluJb SINE Alu 1 142 -170 2031 110 3 49 chr10 45143453 45143761 -100445527 + AluSx SINE Alu 1 294 -18 2307 103 0 16 chr10 45143761 45144073 -100445215 + AluSc SINE Alu 3 309 0 1098 149 43 112 chr10 45144076 45144219 -100445069 + AluJb SINE Alu 2 153 -149 324 0 0 0 chr10 45144219 45144255 -100445033 + (CAA)n Simple_repeat Simple_repeat 1 36 0 2411 84 0 10 chr10 45144259 45144570 -100444718 + AluSc SINE Alu 1 308 -1 1098 149 43 112 chr10 45144570 45144743 -100444545 + AluJb SINE Alu 156 301 -1 765 206 20 0 chr10 45144744 45144890 -100444398 + FRAM SINE Alu 1 143 -33 300 240 160 20 chr10 45145188 45145288 -100444000 - MIR SINE MIR -112 150 37 226 227 0 0 chr10 45145626 45145670 -100443618 + GA-rich Low_complexity Low_complexity 2 45 0 2865 99 176 16 chr10 45145754 45146300 -100442988 - LTR10E LTR ERV1 0 633 1 2984 219 5 10 chr10 45146457 45147216 -100442072 - Harlequin LTR ERV1 -743 5906 3385 2279 131 37 0 chr10 45147270 45147651 -100441637 - Harlequin LTR ERV1 -3887 3009 2615 5753 119 19 13 chr10 45147651 45149021 -100440267 + L1MA3 LINE L1 4872 6249 -56 21 0 0 0 chr10 45149353 45149374 -100439914 + AT_rich Low_complexity Low_complexity 1 21 0 1522 178 78 4 chr10 45149955 45150236 -100439052 + AluJo SINE Alu 1 302 -10 705 131 16 8 chr10 45151045 45151167 -100438121 - AluSx SINE Alu -2 310 188 806 125 0 0 chr10 45151167 45151279 -100438009 - AluSx SINE Alu -200 112 1 362 263 137 29 chr10 45151395 45151600 -100437688 - L1MC5 LINE L1 -20 7941 7715 3928 126 20 0 chr10 45151623 45152234 -100437054 - L1PA11 LINE L1 0 6174 5552 309 26 0 0 chr10 45153708 45153746 -100435542 + (CCCCAG)n Simple_repeat Simple_repeat 1 38 0 293 338 49 7 chr10 45155190 45155332 -100433956 + L2 LINE L2 2722 2869 -445 2863 13 0 0 chr10 45155936 45156249 -100433039 + AluYb8 SINE Alu 1 313 -5 6812 67 32 0 chr10 45157798 45158667 -100430621 + MER11D LTR ERVK 1 897 0 38 22 0 0 chr10 45158749 45158794 -100430494 + AT_rich Low_complexity Low_complexity 1 45 0 270 344 32 5 chr10 45158934 45159155 -100430133 + L1ME LINE L1 5510 5736 -385 743 130 0 0 chr10 45159428 45159536 -100429752 - AluSg/x SINE Alu -120 192 85 1620 160 13 3 chr10 45159536 45159836 -100429452 - L1MB3 LINE L1 -32 6151 5849 1201 194 29 4 chr10 45160070 45160343 -100428945 - L1MB3 LINE L1 -328 5855 5576 1791 143 159 8 chr10 45160408 45160780 -100428508 - MSTA LTR MaLR 0 428 1 1775 179 3 16 chr10 45161312 45161619 -100427669 - AluJo SINE Alu -9 303 1 203 158 0 26 chr10 45161803 45161841 -100427447 + G-rich Low_complexity Low_complexity 1 37 0 1448 155 10 110 chr10 45161959 45162100 -100427188 + AluJo SINE Alu 2 97 -215 2321 110 0 0 chr10 45162100 45162409 -100426879 + AluSc SINE Alu 1 309 0 1448 155 10 110 chr10 45162409 45162577 -100426711 + AluJo SINE Alu 97 280 -32 180 0 0 0 chr10 45162579 45162599 -100426689 + (TC)n Simple_repeat Simple_repeat 1 20 0 * 330 26 0 0 chr10 45162598 45162637 -100426651 + (CA)n Simple_repeat Simple_repeat 1 39 0 2261 70 0 18 chr10 45163035 45163361 -100425927 - AluY SINE Alu 0 321 1 208 333 64 64 chr10 45164366 45164429 -100424859 + MIR SINE MIR 34 96 -166 1408 160 9 118 chr10 45164429 45164600 -100424688 - AluJo SINE Alu -6 296 108 2084 66 0 16 chr10 45164600 45164858 -100424430 - AluY SINE Alu -17 294 41 2148 96 4 0 chr10 45164860 45165130 -100424158 - AluSq SINE Alu -15 298 28 1408 160 9 118 chr10 45165130 45165287 -100424001 - AluJo SINE Alu -195 107 1 208 333 64 64 chr10 45165287 45165379 -100423909 + MIR SINE MIR 95 189 -73 569 333 98 27 chr10 45165714 45165861 -100423427 - L2 LINE L2 0 3313 3178 2254 122 0 0 chr10 45165861 45166173 -100423115 + AluSx SINE Alu 1 312 0 569 333 98 27 chr10 45166173 45166391 -100422897 - L2 LINE L2 -135 3178 2922 1912 155 0 7 chr10 45167438 45167742 -100421546 - AluJo SINE Alu -10 302 1 1809 174 62 36 chr10 45168545 45168931 -100420357 - MSTD LTR MaLR 0 396 1 221 171 0 0 chr10 45169285 45169326 -100419962 + A-rich Low_complexity Low_complexity 1 41 0 507 347 25 17 chr10 45172524 45172763 -100416525 + MIR SINE MIR 16 256 -6 25 75 0 0 chr10 45172848 45172901 -100416387 + AT_rich Low_complexity Low_complexity 1 53 0 549 218 0 27 chr10 45172922 45173032 -100416256 + FLAM_A SINE Alu 4 110 -32 3848 207 59 9 chr10 45173486 45174299 -100414989 - MER21B LTR ERV1 -5 858 5 3029 188 67 17 chr10 45174301 45174959 -100414329 + MER44D DNA MER2_type 15 705 0 473 330 94 26 chr10 45175355 45175697 -100413591 + L2 LINE L2 2026 2390 -924 730 268 6 0 chr10 45176237 45176401 -100412887 + MER58A DNA MER1_type 2 166 0 2405 70 0 3 chr10 45176408 45176707 -100412581 - AluSg SINE Alu -4 306 9 2384 156 11 29 chr10 45176767 45177209 -100412079 + Tigger2a DNA MER2_type 1 434 0 321 119 71 18 chr10 45177235 45177403 -100411885 + (TG)n Simple_repeat Simple_repeat 1 177 0 1069 253 4 13 chr10 45178100 45178271 -100411017 + MER58A DNA MER1_type 2 172 -2248 2218 121 0 0 chr10 45178271 45178576 -100410712 - AluSg SINE Alu -4 306 2 1069 253 4 13 chr10 45178576 45178629 -100410659 + MER58A DNA MER1_type 172 224 0 435 312 101 13 chr10 45178798 45179035 -100410253 + MLT1L LTR MaLR 113 370 -245 1718 143 44 17 chr10 45179062 45179356 -100409932 + AluSg SINE Alu 1 302 -8 1692 150 66 4 chr10 45180170 45180444 -100408844 - AluSx SINE Alu -19 293 3 222 326 58 42 chr10 45180708 45181108 -100408180 - L2 LINE L2 -387 2927 2441 656 212 0 0 chr10 45181296 45181409 -100407879 - AluJb SINE Alu -14 298 186 442 216 0 0 chr10 45181452 45181540 -100407748 + AluJ/FLAM SINE Alu 12 99 -213 2957 143 2 0 chr10 45181559 45181993 -100407295 - MER1A DNA MER1_type -36 493 59 272 234 78 0 chr10 45182302 45182379 -100406909 - LTR41 LTR ERVL -5 768 686 1894 89 0 4 chr10 45182541 45182778 -100406510 + AluSq SINE Alu 1 236 -77 1349 174 67 7 chr10 45184351 45184646 -100404642 + AluJb SINE Alu 1 311 0 1515 212 137 26 chr10 45186095 45186518 -100402770 + MLT1D LTR MaLR 1 479 -26 2035 114 0 0 chr10 45186518 45186829 -100402459 + AluY SINE Alu 12 322 0 1515 212 137 26 chr10 45186829 45186857 -100402431 + MLT1D LTR MaLR 479 503 -2 962 244 30 33 chr10 45186907 45187178 -100402110 + LTR46-int LTR ERV1 675 944 -4642 764 310 30 50 chr10 45187204 45187821 -100401467 + LTR46-int LTR ERV1 4242 5371 -2157 2030 125 4 0 chr10 45189801 45190128 -100399160 - AluSq SINE Alu 0 329 2 24 32 0 0 chr10 45190524 45190555 -100398733 + AT_rich Low_complexity Low_complexity 1 31 0 454 314 57 0 chr10 45190674 45190833 -100398455 - MIR SINE MIR -70 192 25 762 167 23 0 chr10 45191425 45191599 -100397689 + CT-rich Low_complexity Low_complexity 3 180 0 565 290 51 23 chr10 45191878 45192092 -100397196 + HAL1 LINE L1 771 990 -1517 27 0 0 0 chr10 45192106 45192133 -100397155 + AT_rich Low_complexity Low_complexity 1 27 0 1453 277 105 29 chr10 45192141 45192902 -100396386 + HAL1 LINE L1 1619 2437 -70 231 257 0 0 chr10 45193123 45193197 -100396091 + L1ME4a LINE L1 6045 6118 -3 1302 268 114 44 chr10 45193656 45194543 -100394745 - L2 LINE L2 0 3313 2367 2481 85 0 0 chr10 45195630 45195935 -100393353 + AluSg SINE Alu 1 305 -5 344 179 0 0 chr10 45195947 45196003 -100393285 + AluJ/FLAM SINE Alu 2 57 -245 336 248 43 60 chr10 45196248 45196365 -100392923 + L2 LINE L2 3158 3272 0 531 46 35 11 chr10 45197382 45197469 -100391819 + (GAAA)n Simple_repeat Simple_repeat 2 90 0 1993 154 21 21 chr10 45198331 45198668 -100390620 - MER44D DNA MER2_type -2 607 1 21 0 0 0 chr10 45198771 45198792 -100390496 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 45198847 45198868 -100390420 + AT_rich Low_complexity Low_complexity 1 21 0 3033 172 4 4 chr10 45198963 45199509 -100389779 - L1P LINE L1 -1101 5045 4500 1254 91 6 0 chr10 45199511 45199676 -100389612 + L1PA13 LINE L1 5993 6158 -5 180 305 49 67 chr10 45201892 45202115 -100387173 + L2 LINE L2 701 919 -2395 180 135 0 0 chr10 45202495 45202532 -100386756 + (TC)n Simple_repeat Simple_repeat 2 38 0 398 306 93 78 chr10 45202620 45203149 -100386139 + L2 LINE L2 1947 2483 -831 * 706 265 55 0 chr10 45203129 45203329 -100385959 + L2 LINE L2 3103 3313 0 256 346 111 56 chr10 45203336 45203749 -100385539 + L2 LINE L2 2442 2877 -437 195 299 13 123 chr10 45203851 45203944 -100385344 + L2 LINE L2 3029 3100 -172 1871 181 0 7 chr10 45203944 45204253 -100385035 - AluJb SINE Alu -5 307 1 195 299 13 123 chr10 45204253 45204313 -100384975 + L2 LINE L2 3100 3165 -107 2007 152 0 0 chr10 45204891 45205187 -100384101 + AluSx SINE Alu 1 296 -16 22 0 0 0 chr10 45205606 45205628 -100383660 + AT_rich Low_complexity Low_complexity 1 22 0 216 0 0 0 chr10 45205762 45205786 -100383502 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 263 300 107 29 chr10 45206115 45206255 -100383033 + MIR SINE MIR 69 219 -43 1049 293 129 37 chr10 45207053 45207946 -100381342 - L2 LINE L2 -12 3301 2338 1054 182 2 2 chr10 45207947 45207963 -100381325 - L1PB3 LINE L1 0 6151 6136 393 22 0 0 chr10 45207963 45208009 -100381279 + (TCTA)n Simple_repeat Simple_repeat 1 46 0 1054 182 2 2 chr10 45208009 45208181 -100381107 - L1PB3 LINE L1 -14 6137 5964 367 211 28 0 chr10 45208222 45208331 -100380957 + (CATA)n Simple_repeat Simple_repeat 3 114 0 317 244 37 24 chr10 45208518 45208600 -100380688 - MIR SINE MIR -171 91 9 215 211 0 0 chr10 45209280 45209318 -100379970 + polypurine Low_complexity Low_complexity 3 40 0 638 129 83 76 chr10 45209742 45209874 -100379414 - FLAM_C SINE Alu 0 133 1 532 116 32 42 chr10 45209975 45210070 -100379218 - L1P LINE L1 -1552 4594 4501 1178 143 261 29 chr10 45210759 45211004 -100378284 - AluJo SINE Alu 0 302 1 1728 138 12 0 chr10 45211231 45211484 -100377804 - AluSx SINE Alu -13 299 44 1907 159 30 0 chr10 45212582 45212877 -100376411 - AluJb SINE Alu -8 304 1 205 214 36 0 chr10 45213009 45213065 -100376223 + (CATATA)n Simple_repeat Simple_repeat 5 62 0 836 204 34 17 chr10 45216146 45216322 -100372966 + MER5A DNA MER1_type 11 189 0 807 226 28 42 chr10 45216330 45216542 -100372746 + MER3 DNA MER1_type 1 209 0 424 180 126 45 chr10 45217523 45217634 -100371654 - MIR3 SINE MIR -6 202 83 2179 128 0 0 chr10 45218757 45219054 -100370234 - AluSq SINE Alu -16 297 1 312 120 0 0 chr10 45220124 45220174 -100369114 + (TG)n Simple_repeat Simple_repeat 1 50 0 265 266 40 87 chr10 45221466 45221639 -100367649 - MIR SINE MIR -72 190 26 2239 144 123 5 chr10 45221649 45222032 -100367256 + MSTA LTR MaLR 1 428 0 2205 120 0 13 chr10 45222223 45222531 -100366757 - AluSc SINE Alu -5 304 1 301 252 208 38 chr10 45222676 45222835 -100366453 - L2 LINE L2 -5 3308 3123 1761 169 0 17 chr10 45222865 45223155 -100366133 + AluSx SINE Alu 3 287 -25 2227 122 3 0 chr10 45223558 45223870 -100365418 - AluSq SINE Alu 0 313 1 1271 99 6 0 chr10 45224715 45224887 -100364401 + L1PA6 LINE L1 5982 6154 0 636 141 33 0 chr10 45225318 45225410 -100363878 - FLAM_C SINE Alu -21 122 28 1270 215 15 30 chr10 45225415 45225745 -100363543 - L1MC4 LINE L1 -476 7566 7242 470 62 0 0 chr10 45225759 45225824 -100363464 - MER41B LTR ERV1 -88 547 483 968 126 0 28 chr10 45226005 45226148 -100363140 - FLAM_C SINE Alu -4 139 1 298 288 45 27 chr10 45226967 45227078 -100362210 - L1ME2 LINE L1 -25 6141 6029 5409 162 17 7 chr10 45227709 45229281 -100360007 + L1MA7 LINE L1 4691 6281 -10 466 217 19 32 chr10 45229301 45229458 -100359830 + L1ME2 LINE L1 1935 2089 -4451 359 252 16 49 chr10 45229466 45229589 -100359699 + MLT1H LTR MaLR 173 291 -258 689 246 21 5 chr10 45229749 45229998 -100359290 + L1ME2 LINE L1 5564 5815 -753 * 1038 244 34 24 chr10 45229994 45230371 -100358917 + L1ME2 LINE L1 6187 6728 0 23 0 0 0 chr10 45230452 45230475 -100358813 + AT_rich Low_complexity Low_complexity 1 23 0 26 0 0 0 chr10 45230982 45231008 -100358280 + AT_rich Low_complexity Low_complexity 1 26 0 1198 151 0 5 chr10 45231151 45231363 -100357925 + L1MA2 LINE L1 6094 6304 0 843 185 92 0 chr10 45231662 45231835 -100357453 - MER5A DNA MER1_type 0 189 1 3012 232 74 39 chr10 45233406 45234035 -100355253 + L1MDa LINE L1 1118 1724 -4816 1771 146 23 0 chr10 45234035 45234336 -100354952 - L1PA16 LINE L1 0 6166 5859 3012 232 74 39 chr10 45234336 45234411 -100354877 + L1MDa LINE L1 1724 1795 -4745 1595 171 0 93 chr10 45234411 45234755 -100354533 + AluJb SINE Alu 1 312 0 3012 232 74 39 chr10 45234755 45234782 -100354506 + L1MDa LINE L1 1795 1820 -4720 2248 102 0 16 chr10 45234782 45235085 -100354203 - AluY SINE Alu -13 298 1 3012 232 74 39 chr10 45235085 45235775 -100353513 + L1MDa LINE L1 1820 2590 -3950 1122 190 24 16 chr10 45235773 45236020 -100353268 + L1MB1 LINE L1 5897 6145 -23 * 1246 253 21 38 chr10 45236070 45236580 -100352708 + L1MDa LINE L1 2570 3072 -3468 2653 74 117 5 chr10 45236580 45236983 -100352305 + LTR7 LTR ERV1 1 448 -2 1246 253 21 38 chr10 45236983 45237029 -100352259 + L1MDa LINE L1 3072 3117 -3423 692 221 42 75 chr10 45237026 45237334 -100351954 + L1MDa LINE L1 1001 1298 -5242 * 1720 179 87 0 chr10 45237354 45237733 -100351555 + L1MC3 LINE L1 6166 6577 -1208 1254 250 68 71 chr10 45237739 45238343 -100350945 + LTR9B LTR ERV1 7 608 -36 608 161 60 7 chr10 45238347 45238496 -100350792 + L1MC3 LINE L1 7622 7778 -7 2779 263 58 5 chr10 45238496 45239656 -100349632 + L1MDa LINE L1 3890 5110 -1430 213 65 0 0 chr10 45241225 45241256 -100348032 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 5822 158 9 38 chr10 45241864 45244009 -100345279 - L1PB1 LINE L1 -9 6858 4789 1089 124 17 0 chr10 45244008 45244186 -100345102 - L1PB1 LINE L1 -6681 182 2 * 5161 96 32 1 chr10 45244565 45245337 -100343951 - L1PA12 LINE L1 -1 6167 5372 253 182 15 15 chr10 45246953 45247019 -100342269 + GA-rich Low_complexity Low_complexity 4 69 0 2466 198 80 32 chr10 45247961 45248527 -100340761 - MLT1E LTR MaLR 0 593 1 1695 217 3 0 chr10 45248770 45249069 -100340219 + AluJo SINE Alu 1 300 -12 2734 39 0 0 chr10 45249426 45249735 -100339553 + AluYa5 SINE Alu 1 309 -2 1418 90 0 0 chr10 45249739 45249916 -100339372 + AluY SINE Alu 127 303 -8 6528 83 150 2 chr10 45250050 45251113 -100338175 + MER11B LTR ERVK 3 1222 -14 1059 202 72 14 chr10 45251647 45251682 -100337606 + AluJb SINE Alu 85 117 -195 183 42 0 0 chr10 45251682 45251706 -100337582 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1059 202 72 14 chr10 45251706 45251878 -100337410 + AluJb SINE Alu 117 304 -8 26 0 0 0 chr10 45251912 45251938 -100337350 + AT_rich Low_complexity Low_complexity 1 26 0 897 280 62 33 chr10 45251938 45252846 -100336442 + L1ME LINE L1 688 1568 -4512 35 78 0 0 chr10 45253094 45253171 -100336117 + AT_rich Low_complexity Low_complexity 1 77 0 8280 107 40 25 chr10 45253286 45254465 -100334823 - Tigger1 DNA MER2_type -636 1782 577 2384 116 0 0 chr10 45254465 45254776 -100334512 + AluSx SINE Alu 1 311 -1 8280 107 40 25 chr10 45254776 45254978 -100334310 - Tigger1 DNA MER2_type -1841 577 380 907 153 68 0 chr10 45254978 45255141 -100334147 - Tigger1 DNA MER2_type -2244 174 1 315 290 80 7 chr10 45255655 45255793 -100333495 - L1MC4a LINE L1 -978 6830 6683 1946 141 3 13 chr10 45256400 45256713 -100332575 - AluSx SINE Alu -2 310 1 2416 191 25 44 chr10 45257128 45257587 -100331701 + MLT2B2 LTR ERVL 1 450 -65 2214 122 0 3 chr10 45257587 45257890 -100331398 + AluSx SINE Alu 1 302 -10 2416 191 25 44 chr10 45257890 45257953 -100331335 + MLT2B2 LTR ERVL 450 513 -2 1885 199 42 31 chr10 45258178 45258635 -100330653 - MLT1C LTR MaLR 0 467 6 802 193 122 0 chr10 45258685 45258866 -100330422 - MLT1E2 LTR MaLR -25 601 399 2258 118 0 6 chr10 45259688 45260002 -100329286 + AluSx SINE Alu 1 312 0 1876 230 43 86 chr10 45260154 45260320 -100328968 - MLT1E LTR MaLR 0 593 421 3787 166 33 11 chr10 45260320 45260571 -100328717 + L1MA5 LINE L1 5564 5808 -492 1845 146 34 7 chr10 45260571 45260866 -100328422 + AluJo SINE Alu 2 304 -8 3787 166 33 11 chr10 45260866 45261335 -100327953 + L1MA5 LINE L1 5808 6300 0 1876 230 43 86 chr10 45261335 45261776 -100327512 - MLT1E LTR MaLR -172 421 12 199 339 46 23 chr10 45261786 45261916 -100327372 - L2 LINE L2 -292 2980 2848 4920 13 0 0 chr10 45261916 45262472 -100326816 + L1PA3 LINE L1 5600 6155 0 1533 140 86 7 chr10 45262480 45262772 -100326516 + MER46B DNA MER2_type 47 236 0 760 238 147 7 chr10 45263178 45263464 -100325824 - L1MC4a LINE L1 -2079 5729 5404 270 0 0 0 chr10 45265071 45265101 -100324187 + (A)n Simple_repeat Simple_repeat 1 30 0 205 338 0 28 chr10 45269668 45269739 -100319549 - L2 LINE L2 0 3272 3204 300 243 296 12 chr10 45269872 45270041 -100319247 - MIR SINE MIR -27 235 19 293 234 54 45 chr10 45270173 45270284 -100319004 + MIR SINE MIR 114 225 -37 361 297 111 79 chr10 45270303 45270761 -100318527 + L1M2 LINE L1 851 1323 -5526 228 284 115 38 chr10 45271076 45271259 -100318029 - MIR SINE MIR -52 210 14 1885 264 96 32 chr10 45271281 45272009 -100317279 + L2 LINE L2 2060 2834 -480 392 301 0 0 chr10 45271990 45272083 -100317205 + L2 LINE L2 3221 3313 0 * 286 323 85 9 chr10 45272136 45272299 -100316989 - MIR SINE MIR -67 141 15 212 313 60 0 chr10 45272386 45272453 -100316835 + MIR SINE MIR 169 239 -23 334 207 0 0 chr10 45272991 45273049 -100316239 - MIR SINE MIR 0 262 205 188 235 39 0 chr10 45273557 45273608 -100315680 - MIR SINE MIR -66 196 144 3743 174 59 34 chr10 45273608 45274439 -100314849 + MER21B LTR ERV1 1 852 -11 560 168 152 8 chr10 45274452 45274577 -100314711 - MIR SINE MIR -115 147 5 333 47 0 0 chr10 45274943 45274986 -100314302 + (CA)n Simple_repeat Simple_repeat 1 43 0 224 250 18 0 chr10 45276576 45276632 -100312656 + L2 LINE L2 3193 3249 -23 274 349 102 6 chr10 45278690 45278856 -100310432 + MIR3 SINE MIR 15 196 -12 1499 228 87 48 chr10 45280921 45281474 -100307814 + MER34B LTR ERV1 10 565 0 474 289 38 9 chr10 45283375 45283550 -100305738 - MIR SINE MIR -4 204 40 1151 159 19 5 chr10 45283747 45283955 -100305333 - Tigger1 DNA MER2_type 0 2418 2208 640 140 9 0 chr10 45283950 45284057 -100305231 - Tigger1 DNA MER2_type -2261 157 50 * 2031 108 24 0 chr10 45284573 45284861 -100304427 + AluSg SINE Alu 1 295 -15 213 217 72 43 chr10 45287308 45287377 -100301911 - MIR SINE MIR -114 148 78 22 0 0 0 chr10 45288896 45288918 -100300370 + AT_rich Low_complexity Low_complexity 1 22 0 1530 140 23 19 chr10 45290474 45290739 -100298549 - L1MB1 LINE L1 -1 6167 5902 209 33 33 0 chr10 45292088 45292118 -100297170 + (CCCCAG)n Simple_repeat Simple_repeat 1 31 0 495 334 147 15 chr10 45292118 45292629 -100296659 + L2 LINE L2 2684 3312 -1 369 307 64 0 chr10 45293509 45293649 -100295639 - MIR SINE MIR -66 196 48 470 186 21 35 chr10 45294764 45294893 -100294395 + MIR SINE MIR 42 170 -62 203 133 0 0 chr10 45295714 45295744 -100293544 + MIR SINE MIR 119 148 -114 434 220 0 33 chr10 45296370 45296552 -100292736 + G-rich Low_complexity Low_complexity 3 178 0 28 61 0 0 chr10 45296852 45296901 -100292387 + GC_rich Low_complexity Low_complexity 1 49 0 257 286 13 1 chr10 45297549 45297632 -100291656 + MIR SINE MIR 62 144 -64 506 262 99 17 chr10 45298303 45298475 -100290813 - MER5A DNA MER1_type -1 188 3 410 304 7 22 chr10 45299456 45299594 -100289694 + Charlie8 DNA MER1_type 92 227 -2190 483 226 19 0 chr10 45299979 45300085 -100289203 + MER94 DNA DNA 2 109 -25 703 269 113 14 chr10 45300846 45300907 -100288381 - MER33 DNA MER1_type -2270 315 261 2936 126 7 12 chr10 45300907 45301335 -100287953 + MSTB LTR MaLR 1 426 0 703 269 113 14 chr10 45301335 45301555 -100287733 - MER33 DNA MER1_type -2324 261 6 622 342 35 0 chr10 45302261 45302492 -100286796 - MIR SINE MIR -22 240 2 688 132 0 53 chr10 45302827 45303017 -100286271 + (CA)n Simple_repeat Simple_repeat 1 180 0 285 334 128 41 chr10 45303876 45304289 -100284999 + L2 LINE L2 2824 3272 0 225 234 0 0 chr10 45304458 45304505 -100284783 - Charlie8 DNA MER1_type -2247 170 124 946 251 31 50 chr10 45304585 45304908 -100284380 + MLT1I LTR MaLR 75 391 -18 25 65 0 0 chr10 45304946 45304992 -100284296 + AT_rich Low_complexity Low_complexity 1 46 0 2316 133 133 38 chr10 45305126 45305576 -100283712 + MER41E LTR ERV1 15 507 -5 232 337 22 11 chr10 45305781 45305873 -100283415 + MIR3 SINE MIR 104 196 -12 723 168 188 136 chr10 45306443 45306693 -100282595 + LTR49 LTR ERV1 2 426 -353 370 183 219 0 chr10 45306660 45306742 -100282546 + LTR49 LTR ERV1 248 347 -248 * 1337 156 13 4 chr10 45306712 45306943 -100282345 + LTR29 LTR ERV1 390 622 0 204 356 55 25 chr10 45309715 45309878 -100279410 + MIR3 SINE MIR 19 186 -22 340 277 11 9 chr10 45310148 45310259 -100279029 + MIR SINE MIR 38 144 -64 190 164 16 49 chr10 45310903 45310964 -100278324 + CT-rich Low_complexity Low_complexity 3 61 0 258 233 122 44 chr10 45311162 45311252 -100278036 + MIR SINE MIR 21 117 -145 473 278 54 24 chr10 45311464 45311669 -100277619 + MIR SINE MIR 12 222 -40 319 200 26 65 chr10 45312213 45312368 -100276920 + (CCCCG)n Simple_repeat Simple_repeat 2 150 0 200 366 11 11 chr10 45313674 45313767 -100275521 - MIR SINE MIR -19 243 151 2067 164 17 17 chr10 45313774 45314133 -100275155 - L1PA16 LINE L1 -3 6163 5805 758 128 13 19 chr10 45314333 45314489 -100274799 + GA-rich Low_complexity Low_complexity 1 155 0 416 261 177 15 chr10 45314677 45314880 -100274408 - MER112 DNA MER1_type -8 252 17 663 259 62 59 chr10 45314893 45315280 -100274008 + MLT1J LTR MaLR 148 454 -57 994 205 93 5 chr10 45315281 45315486 -100273802 - MER58A DNA MER1_type 0 224 2 546 263 124 8 chr10 45315489 45315755 -100273533 + L2 LINE L2 2804 3100 -213 302 309 100 0 chr10 45316761 45316871 -100272417 - L1M4 LINE L1 -2953 3193 3073 544 172 26 13 chr10 45316874 45317025 -100272263 + CT-rich Low_complexity Low_complexity 2 154 0 270 128 0 0 chr10 45317025 45317064 -100272224 + (TC)n Simple_repeat Simple_repeat 2 40 0 1563 168 21 14 chr10 45317065 45317356 -100271932 - AluJo SINE Alu -6 306 14 459 52 0 0 chr10 45318182 45318240 -100271048 + (TCTA)n Simple_repeat Simple_repeat 1 58 0 2055 168 40 15 chr10 45319548 45319952 -100269336 - MLT2C2 LTR ERVL -50 414 1 966 197 80 0 chr10 45320160 45320348 -100268940 - MER58A DNA MER1_type -1 223 21 703 268 119 44 chr10 45320437 45320714 -100268574 - MLT1L LTR MaLR -7 608 296 1791 154 31 0 chr10 45320714 45321000 -100268288 - AluJb SINE Alu -12 300 6 703 268 119 44 chr10 45321000 45321084 -100268204 - MLT1L LTR MaLR -319 296 220 182 294 76 0 chr10 45321873 45321965 -100267323 + L3 LINE CR1 583 681 -896 192 231 0 103 chr10 45322151 45322165 -100267123 - MIR3 SINE MIR -25 183 169 1561 207 55 22 chr10 45322165 45322527 -100266761 + MLT1A2 LTR MaLR 1 374 0 192 231 0 103 chr10 45322527 45322590 -100266698 - MIR3 SINE MIR -39 169 114 319 245 168 7 chr10 45322664 45322807 -100266481 + MIR SINE MIR 46 211 -51 299 222 0 32 chr10 45323171 45323234 -100266054 + L2 LINE L2 3207 3267 -5 1846 54 0 0 chr10 45324702 45324926 -100264362 - L1PA5 LINE L1 0 6154 5931 476 90 0 0 chr10 45324926 45324993 -100264295 + L1P LINE L1 5208 5274 -872 285 283 87 0 chr10 45324999 45325091 -100264197 - MIR SINE MIR -68 140 41 2769 267 47 72 chr10 45325180 45326248 -100263040 + L1M4b LINE L1 31 1298 -5561 9422 240 69 37 chr10 45326641 45328256 -100261032 + L1M4b LINE L1 1192 2754 -4229 1433 165 49 3 chr10 45328256 45328312 -100260976 + L1MA4A LINE L1 6003 6055 -248 210 37 0 0 chr10 45328312 45328339 -100260949 + (TA)n Simple_repeat Simple_repeat 2 28 0 1433 165 49 3 chr10 45328339 45328567 -100260721 + L1MA4A LINE L1 6055 6300 -3 9422 240 69 37 chr10 45328567 45329503 -100259785 + L1M4b LINE L1 2754 3659 -3324 2255 121 10 0 chr10 45329503 45329810 -100259478 + AluSq SINE Alu 1 310 -3 9422 240 69 37 chr10 45329810 45330999 -100258289 + L1M4b LINE L1 3659 4809 -2174 1801 167 20 0 chr10 45330999 45331292 -100257996 + AluJb SINE Alu 7 305 -7 9422 240 69 37 chr10 45331292 45332200 -100257088 + L1M4b LINE L1 4809 6002 -981 2175 114 3 3 chr10 45332200 45332490 -100256798 + AluSx SINE Alu 6 295 -17 9422 240 69 37 chr10 45332490 45332736 -100256552 + L1M4b LINE L1 6002 6239 -744 41547 35 23 1 chr10 45332888 45338802 -100250486 - L1PA3 LINE L1 -108 6047 2 276 348 19 43 chr10 45339105 45339266 -100250022 + L2 LINE L2 1737 1893 -1421 347 319 8 8 chr10 45339780 45339899 -100249389 + MIR3 SINE MIR 3 121 -87 209 176 0 20 chr10 45340225 45340276 -100249012 + GA-rich Low_complexity Low_complexity 3 52 0 294 260 66 61 chr10 45340288 45340469 -100248819 - MARNA DNA Mariner -357 229 48 3046 148 43 19 chr10 45340610 45341189 -100248099 - Tigger1 DNA MER2_type -1 2417 1825 419 129 0 29 chr10 45341296 45341366 -100247922 + AluSc SINE Alu 224 291 -18 1877 160 0 35 chr10 45341393 45341712 -100247576 - AluJb SINE Alu -4 308 1 326 91 0 30 chr10 45341716 45341782 -100247506 + L1MB8 LINE L1 6115 6178 0 229 224 206 19 chr10 45342139 45342246 -100247042 - MIR3 SINE MIR -77 131 5 422 299 92 17 chr10 45346492 45346666 -100242622 + MER91A DNA MER1_type 6 192 -4 188 286 78 0 chr10 45347286 45347363 -100241925 - MIR SINE MIR -105 103 21 320 220 73 28 chr10 45348402 45348511 -100240777 + MER5A DNA MER1_type 6 119 -70 561 265 61 17 chr10 45348871 45349052 -100240236 + MIR SINE MIR 74 262 0 812 205 50 104 chr10 45349154 45349413 -100239875 - MIR SINE MIR -1 261 17 482 347 68 7 chr10 45350589 45350823 -100238465 + MIR SINE MIR 9 252 -10 924 206 0 0 chr10 45350929 45351255 -100238033 + (TGGA)n Simple_repeat Simple_repeat 1 326 0 747 232 0 0 chr10 45351283 45351589 -100237699 + (TGGA)n Simple_repeat Simple_repeat 1 306 0 188 320 144 44 chr10 45352308 45352489 -100236799 - L3 LINE CR1 -611 966 768 288 300 76 11 chr10 45353327 45353472 -100235816 - MIR3 SINE MIR -52 156 33 599 232 0 5 chr10 45353510 45353892 -100235396 + (TG)n Simple_repeat Simple_repeat 1 379 0 534 252 79 29 chr10 45353925 45354130 -100235158 - MIR SINE MIR -35 227 14 228 240 156 42 chr10 45354075 45354171 -100235117 + MIR SINE MIR 27 133 -75 * 214 340 72 52 chr10 45354602 45354796 -100234492 + MIR SINE MIR 48 245 -17 592 125 0 18 chr10 45356365 45356477 -100232811 + (GA)n Simple_repeat Simple_repeat 2 111 0 606 270 19 37 chr10 45356608 45356823 -100232465 + MLT1G LTR MaLR 378 588 -2 3212 227 63 23 chr10 45360031 45360743 -100228545 - L1M4 LINE L1 -1547 4599 3832 1661 149 116 30 chr10 45360743 45361079 -100228209 - MLT1A1 LTR MaLR 0 365 1 3212 227 63 23 chr10 45361079 45361401 -100227887 - L1M4 LINE L1 -2314 3832 3524 2136 132 51 28 chr10 45361512 45361868 -100227420 + THE1B LTR MaLR 1 364 0 187 352 73 58 chr10 45361919 45362246 -100227042 - L3 LINE CR1 -242 1335 1004 235 219 134 24 chr10 45362503 45362585 -100226703 - MIR SINE MIR -29 233 143 380 316 39 19 chr10 45363647 45363802 -100225486 + MIR SINE MIR 40 197 -65 332 367 33 28 chr10 45364246 45364461 -100224827 + MIR SINE MIR 11 226 -36 249 33 0 0 chr10 45366295 45366325 -100222963 + (TG)n Simple_repeat Simple_repeat 1 30 0 192 206 0 0 chr10 45366502 45366536 -100222752 - MIR SINE MIR -65 143 110 254 288 89 27 chr10 45366791 45366937 -100222351 + MIR3 SINE MIR 34 188 -20 246 318 24 0 chr10 45367133 45367218 -100222070 - MIR SINE MIR -116 146 60 206 279 180 18 chr10 45367911 45368022 -100221266 - MIR SINE MIR -64 144 16 1282 213 51 27 chr10 45369346 45369679 -100219609 - MER47A DNA MER2_type 0 366 26 195 129 0 0 chr10 45369819 45369850 -100219438 + (TTCTCC)n Simple_repeat Simple_repeat 4 34 0 956 164 67 0 chr10 45369855 45370020 -100219268 - AluJb SINE Alu -1 311 136 322 261 9 27 chr10 45370611 45370722 -100218566 + MLT1L LTR MaLR 174 282 -333 190 375 50 17 chr10 45371703 45371823 -100217465 + L3 LINE CR1 1311 1434 -143 387 205 64 0 chr10 45372139 45372254 -100217034 + MIR SINE MIR 20 145 -63 325 159 16 16 chr10 45372701 45372764 -100216524 - MIR SINE MIR -111 151 89 1599 238 109 19 chr10 45373980 45374446 -100214842 + MLT1F LTR MaLR 24 531 -11 1960 151 3 13 chr10 45375325 45375629 -100213659 - AluJb SINE Alu -11 301 1 181 297 81 40 chr10 45376888 45376962 -100212326 - L3 LINE CR1 -19 1558 1482 965 233 118 74 chr10 45377753 45377835 -100211453 + HAL1 LINE L1 605 682 -1825 2549 120 5 19 chr10 45377835 45378203 -100211085 + THE1B LTR MaLR 2 364 0 965 233 118 74 chr10 45378203 45378823 -100210465 + HAL1 LINE L1 682 1338 -1169 441 236 24 91 chr10 45378860 45379114 -100210174 + HAL1 LINE L1 2271 2507 0 812 244 102 50 chr10 45379938 45380340 -100208948 - MLT1E2 LTR MaLR -196 430 8 767 189 38 0 chr10 45380501 45380660 -100208628 + MER5A DNA MER1_type 1 165 -24 2146 148 0 0 chr10 45381161 45381466 -100207822 + AluSx SINE Alu 7 311 -1 812 194 18 12 chr10 45381514 45381679 -100207609 + MER5B DNA MER1_type 1 166 -12 476 269 41 29 chr10 45381714 45381885 -100207403 + MER5B DNA MER1_type 2 174 -4 1324 172 31 139 chr10 45382306 45382724 -100206564 - MER93b LTR ERV1 0 373 1 286 282 0 0 chr10 45383012 45383083 -100206205 + MIR SINE MIR 66 136 -126 2195 136 0 13 chr10 45383243 45383559 -100205729 + AluJo SINE Alu 1 312 0 531 244 141 44 chr10 45383687 45384109 -100205179 + MLT1H LTR MaLR 12 527 -22 219 139 0 0 chr10 45385741 45385777 -100203511 + (TA)n Simple_repeat Simple_repeat 2 37 0 619 247 13 0 chr10 45386914 45387064 -100202224 + L1MB4 LINE L1 5445 5596 -587 1269 185 8 4 chr10 45387074 45387323 -100201965 + L1MA4 LINE L1 5873 6122 -178 1439 35 0 0 chr10 45387323 45387493 -100201795 - L1PA4 LINE L1 0 6155 5986 947 160 59 11 chr10 45387493 45387673 -100201615 + L1MA4 LINE L1 6104 6299 -1 249 161 0 89 chr10 45387674 45387730 -100201558 + L1MB4 LINE L1 5593 5643 -528 1267 193 48 20 chr10 45387741 45388036 -100201252 + L1MB4 LINE L1 5878 6180 0 240 313 21 10 chr10 45388212 45388308 -100200980 + L2 LINE L2 3126 3222 -50 1743 209 73 15 chr10 45389658 45390070 -100199218 + MER63B DNA MER1_type 1 436 0 1366 91 11 0 chr10 45391718 45391894 -100197394 - AluSg/x SINE Alu -1 311 134 2097 77 7 47 chr10 45391894 45392193 -100197095 - AluY SINE Alu -1 310 24 369 311 20 40 chr10 45392254 45392402 -100196886 + L2 LINE L2 3123 3267 -5 966 190 119 85 chr10 45392808 45393161 -100196127 - MLT1A1 LTR MaLR 0 365 1 556 50 25 0 chr10 45393425 45393505 -100195783 + (GA)n Simple_repeat Simple_repeat 1 82 0 321 244 24 0 chr10 45393505 45393587 -100195701 + L2 LINE L2 1725 1808 -1506 966 270 91 40 chr10 45394152 45394185 -100195103 - L1ME2 LINE L1 0 6164 6134 2030 155 82 68 chr10 45394185 45394688 -100194600 + LTR54 LTR ERV1 1 510 0 966 270 91 40 chr10 45394688 45394972 -100194316 - L1ME2 LINE L1 -30 6134 5866 3197 157 0 2 chr10 45394972 45395508 -100193780 - L1PB1 LINE L1 -1 6150 5616 966 270 91 40 chr10 45395508 45395741 -100193547 - L1ME2 LINE L1 -298 5866 5585 458 198 12 0 chr10 45395849 45395935 -100193353 + MER21B LTR ERV1 9 95 -768 665 294 75 18 chr10 45395993 45396272 -100193016 + MER21B LTR ERV1 118 412 -451 726 243 65 33 chr10 45396311 45396587 -100192701 + MER21B LTR ERV1 470 754 -109 192 234 0 0 chr10 45399747 45399794 -100189494 + GA-rich Low_complexity Low_complexity 3 49 0 1454 217 58 75 chr10 45400282 45400853 -100188435 - MER34B LTR ERV1 0 565 5 23 0 0 0 chr10 45401279 45401302 -100187986 + AT_rich Low_complexity Low_complexity 1 23 0 1095 154 28 33 chr10 45401306 45401474 -100187814 - L1MA4A LINE L1 -11 6292 6124 2262 113 0 13 chr10 45401474 45401783 -100187505 + AluSx SINE Alu 1 305 -7 1095 154 28 33 chr10 45401783 45401828 -100187460 - L1MA4A LINE L1 -179 6124 6080 315 0 0 0 chr10 45403660 45403695 -100185593 + (TG)n Simple_repeat Simple_repeat 2 36 0 2405 81 0 40 chr10 45404222 45404543 -100184745 + AluY SINE Alu 1 308 -3 365 237 35 26 chr10 45405044 45405158 -100184130 - MIR SINE MIR -62 146 32 240 346 168 5 chr10 45405794 45405979 -100183309 - L3 LINE CR1 -11 1566 1352 183 256 0 23 chr10 45406025 45406068 -100183220 - MIR SINE MIR -57 151 110 * 199 275 50 38 chr10 45406062 45406142 -100183146 + MIR SINE MIR 19 99 -109 701 211 108 0 chr10 45406463 45406629 -100182659 + MER5A DNA MER1_type 6 189 0 2124 151 84 3 chr10 45406660 45407002 -100182286 + MLT2D LTR ERVL 1 379 -35 504 48 0 0 chr10 45407002 45407065 -100182223 + (TA)n Simple_repeat Simple_repeat 2 64 0 2124 151 84 3 chr10 45407065 45407105 -100182183 + MLT2D LTR ERVL 379 414 0 262 284 25 0 chr10 45407120 45407201 -100182087 - MER117 DNA MER1_type -70 127 45 390 363 33 24 chr10 45407384 45407477 -100181811 + MIR SINE MIR 48 139 -123 1915 168 0 3 chr10 45407477 45407775 -100181513 + AluJb SINE Alu 1 297 -15 390 363 33 24 chr10 45407775 45407893 -100181395 + MIR SINE MIR 139 261 -1 638 331 43 46 chr10 45408459 45409195 -100180093 + L1M4 LINE L1 3359 4094 -2052 1735 181 103 0 chr10 45409195 45409526 -100179762 + MLT1A1 LTR MaLR 1 365 0 638 331 43 46 chr10 45409526 45409601 -100179687 + L1M4 LINE L1 4094 4168 -1978 1385 283 134 40 chr10 45409626 45410277 -100179011 - L2 LINE L2 -622 2692 1981 196 128 21 21 chr10 45410316 45410363 -100178925 + CT-rich Low_complexity Low_complexity 1 47 0 536 162 0 9 chr10 45410393 45410504 -100178784 + CT-rich Low_complexity Low_complexity 3 112 0 946 258 32 42 chr10 45410519 45410922 -100178366 - L1ME1 LINE L1 -5 6230 5832 476 233 149 31 chr10 45410920 45411148 -100178140 - L1ME1 LINE L1 -1077 5138 4884 * 228 171 0 0 chr10 45411236 45411277 -100178011 - L1ME LINE L1 -339 5825 5785 229 219 109 0 chr10 45411379 45411443 -100177845 - L2 LINE L2 -989 2325 2255 3381 246 40 63 chr10 45411447 45412318 -100176970 - L1ME1 LINE L1 -1564 4651 3828 2298 104 10 0 chr10 45412318 45412617 -100176671 + AluSq SINE Alu 3 304 -9 3381 246 40 63 chr10 45412617 45413257 -100176031 - L1ME1 LINE L1 -2387 3828 3175 406 221 0 40 chr10 45413267 45413416 -100175872 + CT-rich Low_complexity Low_complexity 4 146 0 2108 133 13 0 chr10 45413431 45413731 -100175557 - AluSx SINE Alu -8 304 1 493 230 176 0 chr10 45413733 45413898 -100175390 - L1ME1 LINE L1 -3002 3213 3020 1152 279 144 24 chr10 45413910 45414651 -100174637 - L1ME1 LINE L1 -5518 878 49 256 303 46 40 chr10 45415319 45415471 -100173817 - MLT1K LTR MaLR -355 233 81 217 246 263 26 chr10 45417040 45417154 -100172134 - L2 LINE L2 0 3313 3173 535 274 137 5 chr10 45417887 45418077 -100171211 + MIR SINE MIR 48 262 0 656 269 49 40 chr10 45418879 45419102 -100170186 - MIR SINE MIR -7 255 31 306 50 0 0 chr10 45419343 45419383 -100169905 + (TG)n Simple_repeat Simple_repeat 2 41 0 362 56 0 19 chr10 45419610 45419664 -100169624 + (CA)n Simple_repeat Simple_repeat 1 53 0 1392 200 32 71 chr10 45420615 45420841 -100168447 - MLT1A1 LTR MaLR 0 365 159 2283 108 0 7 chr10 45420841 45421146 -100168142 - AluSc SINE Alu -6 303 1 1392 200 32 71 chr10 45421146 45421299 -100167989 - MLT1A1 LTR MaLR -206 159 1 183 308 19 0 chr10 45422437 45422489 -100166799 - L2 LINE L2 -12 3260 3208 284 334 172 19 chr10 45423691 45423999 -100165289 - L2 LINE L2 -439 2875 2521 203 317 58 19 chr10 45424073 45424177 -100165111 - MIR3 SINE MIR -42 166 59 210 118 0 0 chr10 45425138 45425172 -100164116 + (GA)n Simple_repeat Simple_repeat 1 34 0 564 298 84 13 chr10 45427012 45427250 -100162038 + MLT1L LTR MaLR 350 604 -11 249 307 26 44 chr10 45427518 45427632 -100161656 + LTR16A1 LTR ERVL 346 457 0 2255 147 13 3 chr10 45427928 45428303 -100160985 + MLT1B LTR MaLR 1 379 -11 2217 139 28 182 chr10 45430007 45430040 -100159248 - MLT2B3 LTR ERVL 0 554 518 413 88 0 15 chr10 45430040 45430108 -100159180 + (TA)n Simple_repeat Simple_repeat 2 68 0 2217 139 28 182 chr10 45430108 45430723 -100158565 - MLT2B3 LTR ERVL -36 518 6 546 272 124 52 chr10 45430877 45431389 -100157899 - MLT1F1 LTR MaLR -7 588 2 240 376 41 24 chr10 45432622 45432792 -100156496 + MIR3 SINE MIR 30 202 -6 2289 84 7 36 chr10 45433255 45433564 -100155724 + AluSx SINE Alu 1 300 -12 267 31 0 0 chr10 45433567 45433599 -100155689 + (CA)n Simple_repeat Simple_repeat 1 32 0 4194 166 36 84 chr10 45435944 45436778 -100152510 - L1MD1 LINE L1 0 6242 5480 2425 42 42 0 chr10 45436778 45437064 -100152224 - AluY SINE Alu -13 298 1 4194 166 36 84 chr10 45437064 45437343 -100151945 - L1MD1 LINE L1 -762 5480 5189 755 175 7 29 chr10 45437359 45437496 -100151792 + AluJo SINE Alu 2 135 -177 3419 252 79 36 chr10 45437509 45438369 -100150919 - L1MD1 LINE L1 -2522 3624 2678 2541 146 31 24 chr10 45438369 45438794 -100150494 - MSTC LTR MaLR 0 428 1 3419 252 79 36 chr10 45438794 45439344 -100149944 - L1MD1 LINE L1 -3468 2678 2153 2008 140 0 0 chr10 45439454 45439739 -100149549 + AluSg SINE Alu 24 308 -2 2042 132 3 3 chr10 45439757 45440052 -100149236 + AluSx SINE Alu 5 299 -13 366 23 0 0 chr10 45440815 45440858 -100148430 + (TCCA)n Simple_repeat Simple_repeat 1 43 0 2100 113 30 0 chr10 45441010 45441310 -100147978 + AluSq SINE Alu 1 309 -4 277 247 39 0 chr10 45441801 45441878 -100147410 + L1M4 LINE L1 4491 4570 -1576 587 309 129 54 chr10 45441973 45442207 -100147081 - L1M4 LINE L1 -752 5394 5179 1596 124 0 0 chr10 45442207 45442416 -100146872 - AluSx SINE Alu -103 209 1 587 309 129 54 chr10 45442416 45443416 -100145872 - L1M4 LINE L1 -967 5179 4068 423 271 66 13 chr10 45446149 45446300 -100142988 + MER3 DNA MER1_type 1 159 -50 533 221 139 20 chr10 45446461 45446799 -100142489 - MLT1F LTR MaLR 0 555 123 955 266 41 41 chr10 45446904 45447038 -100142250 + MER93a LTR ERV1 35 168 -234 14663 132 25 22 chr10 45447038 45449447 -100139841 + Tigger1 DNA MER2_type 2 2418 0 955 266 41 41 chr10 45449447 45449676 -100139612 + MER93a LTR ERV1 167 398 -4 192 40 0 0 chr10 45452620 45452645 -100136643 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 1708 171 67 24 chr10 45452656 45453030 -100136258 - MLT1B LTR MaLR 0 390 1 424 314 65 42 chr10 45453762 45454068 -100135220 - L1M4 LINE L1 -2983 3163 2851 1674 210 82 19 chr10 45454166 45454580 -100134708 + MER44D DNA MER2_type 111 605 0 31 0 0 0 chr10 45454590 45454621 -100134667 + AT_rich Low_complexity Low_complexity 1 31 0 258 365 183 0 chr10 45455528 45455725 -100133563 + MIR SINE MIR 8 240 -22 33 66 0 0 chr10 45455845 45455906 -100133382 + AT_rich Low_complexity Low_complexity 1 61 0 754 330 78 17 chr10 45457317 45457781 -100131507 + L3 LINE CR1 985 1476 -101 903 255 38 17 chr10 45458620 45458910 -100130378 - L1MD3 LINE L1 -10 7985 7690 196 348 67 37 chr10 45458949 45459113 -100130175 - L2 LINE L2 0 3272 3104 268 319 0 53 chr10 45459180 45459293 -100129995 - L2 LINE L2 -192 3080 2974 200 257 40 0 chr10 45459454 45459528 -100129760 + GA-rich Low_complexity Low_complexity 5 81 0 207 213 0 0 chr10 45459543 45459623 -100129665 + GA-rich Low_complexity Low_complexity 2 81 0 326 198 22 22 chr10 45460235 45460326 -100128962 - MIR SINE MIR -118 144 54 344 254 160 6 chr10 45462154 45462323 -100126965 - MIR SINE MIR 0 262 68 297 0 0 0 chr10 45462478 45462511 -100126777 + (CA)n Simple_repeat Simple_repeat 2 34 0 506 289 63 53 chr10 45462826 45463369 -100125919 + L1MEd LINE L1 943 1583 -907 573 225 69 106 chr10 45463832 45463915 -100125373 + HAL1 LINE L1 1024 1109 -1398 2045 124 0 0 chr10 45463915 45464190 -100125098 + AluSx SINE Alu 1 275 -37 573 225 69 106 chr10 45464190 45464290 -100124998 + HAL1 LINE L1 1109 1211 -1296 2348 106 0 3 chr10 45464290 45464601 -100124687 + AluSg SINE Alu 1 310 0 573 225 69 106 chr10 45464601 45464984 -100124304 + HAL1 LINE L1 1211 1570 -937 194 355 43 14 chr10 45466131 45466269 -100123019 + L3b LINE CR1 1103 1244 -339 933 218 142 32 chr10 45466370 45466743 -100122545 - MER57A LTR ERV1 -2 401 39 281 171 45 36 chr10 45466781 45466892 -100122396 + (TA)n Simple_repeat Simple_repeat 1 112 0 1110 141 11 6 chr10 45467044 45467221 -100122067 - L1MB5 LINE L1 0 6174 5997 310 243 21 64 chr10 45467304 45467444 -100121844 + L2 LINE L2 3118 3251 -62 2113 188 63 0 chr10 45469080 45469479 -100119809 - MSTB LTR MaLR 0 426 3 453 179 111 8 chr10 45469486 45469603 -100119685 - MSTB-int LTR MaLR -5 1646 1518 6502 174 25 3 chr10 45469603 45470679 -100118609 - MSTB-int LTR MaLR -551 1100 1 1426 151 52 90 chr10 45470679 45471176 -100118112 - MSTB LTR MaLR 0 426 1 439 267 46 0 chr10 45474623 45474754 -100114534 + L2 LINE L2 3136 3272 0 336 148 0 0 chr10 45476956 45477017 -100112271 + (CA)n Simple_repeat Simple_repeat 2 62 0 1924 174 59 31 chr10 45477975 45478366 -100110922 - MER93a LTR ERV1 0 402 1 1082 236 53 19 chr10 45478455 45478777 -100110511 - L1M4 LINE L1 -1806 4340 4008 366 180 70 40 chr10 45478787 45478887 -100110401 + MER57A LTR ERV1 301 403 0 6157 223 46 51 chr10 45478916 45480318 -100108970 - L1MDa LINE L1 -3907 2633 944 2067 114 0 33 chr10 45480318 45480625 -100108663 - AluSg SINE Alu -13 297 1 6157 223 46 51 chr10 45480625 45481564 -100107724 - L1MDa LINE L1 -5596 944 1 680 182 9 0 chr10 45482684 45482794 -100106494 - FLAM_A SINE Alu -13 129 19 952 247 117 53 chr10 45482808 45483508 -100105780 - L2 LINE L2 -126 3187 2428 489 251 36 64 chr10 45483549 45483768 -100105520 + MER102b DNA MER1_type 119 331 -10 295 272 29 88 chr10 45485391 45485459 -100103829 - L1ME4a LINE L1 -232 5889 5831 2495 67 0 0 chr10 45485459 45485757 -100103531 - AluY SINE Alu -13 298 1 295 272 29 88 chr10 45485757 45485824 -100103464 - L1ME4a LINE L1 -290 5831 5762 415 229 153 7 chr10 45485825 45485969 -100103319 + MLT1J2 LTR MaLR 2 166 -284 335 307 42 13 chr10 45485997 45486173 -100103115 + MLT1J2 LTR MaLR 266 402 -7 243 250 71 24 chr10 45486418 45486502 -100102786 - L1ME4a LINE L1 -650 5471 5384 1577 197 56 19 chr10 45489819 45489907 -100099381 + MLT1B LTR MaLR 1 84 -306 335 160 13 27 chr10 45489907 45489982 -100099306 + L1PA2 LINE L1 6082 6155 0 1577 197 56 19 chr10 45489982 45490269 -100099019 + MLT1B LTR MaLR 84 390 0 1014 128 0 0 chr10 45491220 45491392 -100097896 + (TG)n Simple_repeat Simple_repeat 1 172 0 26 30 0 0 chr10 45492784 45492817 -100096471 + AT_rich Low_complexity Low_complexity 1 33 0 1738 188 78 0 chr10 45494327 45494646 -100094642 + MER7A DNA MER2_type 1 342 -4 254 301 298 19 chr10 45494688 45494950 -100094338 - L2 LINE L2 -3 3269 2935 192 97 0 0 chr10 45495175 45495206 -100094082 + (CAAAAA)n Simple_repeat Simple_repeat 3 33 0 251 331 35 7 chr10 45495696 45495841 -100093447 - L2 LINE L2 -797 2517 2369 280 226 0 0 chr10 45495899 45495952 -100093336 + L2 LINE L2 3261 3313 0 6475 148 12 18 chr10 45496916 45499013 -100090275 - L1MA4 LINE L1 -11 6289 4195 320 305 136 8 chr10 45499079 45499197 -100090091 - MIR SINE MIR -59 149 17 591 253 59 12 chr10 45499391 45499561 -100089727 + MIR SINE MIR 41 218 -44 26 0 0 0 chr10 45500632 45500658 -100088630 + AT_rich Low_complexity Low_complexity 1 26 0 30 0 0 0 chr10 45501083 45501113 -100088175 + AT_rich Low_complexity Low_complexity 1 30 0 534 250 219 0 chr10 45501212 45501404 -100087884 + MIR SINE MIR 8 241 -21 219 298 0 0 chr10 45501368 45501415 -100087873 + L2 LINE L2 3251 3297 -16 * 422 326 64 13 chr10 45501485 45501718 -100087570 + L1ME LINE L1 5574 5818 -303 1563 186 15 0 chr10 45501735 45502009 -100087279 + L1PA16 LINE L1 5871 6148 -18 315 267 8 92 chr10 45502677 45502718 -100086570 - L1ME LINE L1 -480 5641 5598 1786 121 39 55 chr10 45502718 45503025 -100086263 + AluSx SINE Alu 1 302 -10 315 267 8 92 chr10 45503025 45503103 -100086185 - L1ME LINE L1 -523 5598 5532 200 286 32 0 chr10 45503696 45503759 -100085529 + (TG)n Simple_repeat Simple_repeat 2 66 0 21 0 0 0 chr10 45505737 45505758 -100083530 + AT_rich Low_complexity Low_complexity 1 21 0 1373 242 83 33 chr10 45506387 45506845 -100082443 + MLT1D LTR MaLR 7 487 -18 2296 106 0 3 chr10 45507377 45507680 -100081608 - AluSx SINE Alu -10 302 1 289 200 17 17 chr10 45508139 45508199 -100081089 + MIR SINE MIR 203 262 0 1041 173 16 29 chr10 45508735 45508978 -100080310 - L1MD3 LINE L1 0 7995 7756 603 318 38 4 chr10 45509047 45509308 -100079980 + LTR16A LTR ERVL 166 435 -15 769 291 48 7 chr10 45509322 45509611 -100079677 + HERV16 LTR ERVL 1 301 -4695 1014 284 57 8 chr10 45509629 45509981 -100079307 - HERV16 LTR ERVL -3823 1173 805 787 293 128 65 chr10 45510514 45511375 -100077913 + L1M4 LINE L1 4458 5372 -774 40 37 0 0 chr10 45511701 45511755 -100077533 + AT_rich Low_complexity Low_complexity 1 54 0 1053 198 35 5 chr10 45511954 45512156 -100077132 + MER3 DNA MER1_type 2 209 0 1024 59 5 38 chr10 45513965 45514151 -100075137 + (GA)n Simple_repeat Simple_repeat 1 180 0 232 120 40 0 chr10 45514152 45514202 -100075086 + GA-rich Low_complexity Low_complexity 3 54 0 406 49 33 0 chr10 45514309 45514370 -100074918 + (GA)n Simple_repeat Simple_repeat 1 63 0 549 0 0 0 chr10 45515426 45515487 -100073801 + (GA)n Simple_repeat Simple_repeat 1 61 0 333 342 42 0 chr10 45515588 45515708 -100073580 - L2 LINE L2 -4 3309 3185 248 262 0 0 chr10 45515780 45515841 -100073447 + (TA)n Simple_repeat Simple_repeat 1 61 0 279 263 0 0 chr10 45515865 45515941 -100073347 - L1MC4 LINE L1 -1339 6703 6628 433 308 49 49 chr10 45515951 45516175 -100073113 - L2 LINE L2 -168 3145 2922 1427 280 110 11 chr10 45516458 45517005 -100072283 - L1ME3A LINE L1 -5 6165 5565 277 217 54 93 chr10 45517116 45517245 -100072043 - L1ME4a LINE L1 -189 5932 5809 296 327 74 0 chr10 45517277 45517439 -100071849 - L1ME4a LINE L1 -386 5735 5562 285 331 66 18 chr10 45517927 45518093 -100071195 - MIR3 SINE MIR -17 191 18 2045 141 0 13 chr10 45519788 45520093 -100069195 + AluSx SINE Alu 1 301 -11 4199 43 2 0 chr10 45520097 45520603 -100068685 - L1PA8 LINE L1 -382 5790 5284 3211 72 0 10 chr10 45520603 45520997 -100068291 + L1PA8 LINE L1 5774 6170 -2 270 277 122 54 chr10 45521366 45521514 -100067774 - MIR3 SINE MIR -10 198 41 909 28 0 0 chr10 45523415 45523523 -100065765 + (GAAA)n Simple_repeat Simple_repeat 1 108 0 2581 188 60 18 chr10 45523567 45524137 -100065151 - L1MC1 LINE L1 -6 6327 5734 1767 213 42 2 chr10 45524142 45524550 -100064738 - L1MD2 LINE L1 -1 6358 5935 434 246 133 0 chr10 45524689 45524884 -100064404 + L1MCa LINE L1 2213 2433 -3993 362 212 80 53 chr10 45525812 45525925 -100063363 + L1ME3A LINE L1 5965 6080 -90 22 0 0 0 chr10 45525970 45525992 -100063296 + AT_rich Low_complexity Low_complexity 1 22 0 3386 192 230 40 chr10 45526218 45527073 -100062215 + LTR28 LTR ERV1 3 1020 0 2228 128 0 3 chr10 45528118 45528431 -100060857 - AluSx SINE Alu 0 312 1 2718 124 34 63 chr10 45528582 45529189 -100060099 + MER4B LTR ERV1 3 779 0 2409 49 14 0 chr10 45529190 45529478 -100059810 - AluY SINE Alu -19 292 1 1439 103 0 15 chr10 45529508 45529739 -100059549 - AluSg/x SINE Alu 0 312 85 1738 135 28 17 chr10 45529766 45530055 -100059233 - AluSx SINE Alu -20 292 1 1184 136 5 15 chr10 45530453 45530659 -100058629 + L1PA15 LINE L1 5961 6164 -1 2345 152 12 5 chr10 45530858 45531260 -100058028 - MER66B LTR ERV1 -81 405 1 3728 208 20 28 chr10 45532385 45533294 -100055994 - L1MB5 LINE L1 -9 6165 5264 2545 235 39 24 chr10 45533268 45534188 -100055100 - L1MB5 LINE L1 -2401 3745 2812 * 6192 239 46 14 chr10 45534164 45535929 -100053359 - L1M4 LINE L1 -842 5304 3466 2580 68 0 0 chr10 45535929 45536239 -100053049 - AluY SINE Alu -1 310 1 6192 239 46 14 chr10 45536239 45536469 -100052819 - L1M4 LINE L1 -2680 3466 3245 225 65 0 0 chr10 45536794 45536825 -100052463 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 360 317 29 14 chr10 45536999 45537146 -100052142 + MIR SINE MIR 5 154 -54 6409 105 44 15 chr10 45537158 45538109 -100051179 + L1MA2 LINE L1 4941 5947 -357 2109 128 3 0 chr10 45538109 45538407 -100050881 + AluSx SINE Alu 1 299 -13 6409 105 44 15 chr10 45538407 45538775 -100050513 + L1MA2 LINE L1 5947 6303 -1 183 271 146 31 chr10 45538788 45538884 -100050404 + MIR SINE MIR 156 262 0 241 264 0 0 chr10 45538904 45538957 -100050331 + MIR SINE MIR 117 169 -93 787 266 145 40 chr10 45538968 45539213 -100050075 - MLT1G LTR MaLR -1 589 371 1887 143 53 12 chr10 45539213 45539535 -100049753 + MER1B DNA MER1_type 3 337 0 787 266 145 40 chr10 45539535 45539858 -100049430 - MLT1G LTR MaLR -219 371 3 243 218 126 23 chr10 45539956 45540043 -100049245 - L2 LINE L2 -84 3229 3134 228 167 0 0 chr10 45540887 45540935 -100048353 + (TG)n Simple_repeat Simple_repeat 2 49 0 1953 129 3 30 chr10 45541566 45541869 -100047419 + AluSc SINE Alu 2 296 -13 4090 188 40 69 chr10 45541873 45543272 -100046016 + L1ME3 LINE L1 1276 2633 -3907 361 148 69 50 chr10 45543301 45543402 -100045886 - MER57A LTR ERV1 0 403 301 557 270 23 0 chr10 45543402 45543576 -100045712 + L1ME3 LINE L1 4392 4569 -1971 996 220 9 5 chr10 45544339 45544557 -100044731 - MER20 DNA MER1_type 0 219 1 251 269 214 21 chr10 45544568 45544713 -100044575 + MIR SINE MIR 38 210 -52 229 323 30 20 chr10 45544850 45544949 -100044339 - MIR3 SINE MIR 0 208 109 414 311 16 8 chr10 45545124 45545246 -100044042 - MIR SINE MIR -66 142 20 2172 90 20 13 chr10 45546628 45546928 -100042360 - AluSx SINE Alu -10 302 1 343 254 112 66 chr10 45547031 45547187 -100042101 - MIR SINE MIR -63 145 25 354 301 172 5 chr10 45547377 45547580 -100041708 + MIR SINE MIR 13 249 -13 3325 18 0 0 chr10 45548206 45548603 -100040685 - L1P LINE L1 -1737 4409 4013 355 321 54 38 chr10 45548672 45548912 -100040376 + L1ME3 LINE L1 5314 5557 -983 263 254 54 88 chr10 45548994 45549097 -100040191 + L1M4b LINE L1 93 187 -6672 2206 129 3 0 chr10 45549097 45549407 -100039881 + AluSx SINE Alu 1 311 -1 263 254 54 88 chr10 45549407 45549508 -100039780 + L1M4b LINE L1 187 290 -6569 710 243 81 64 chr10 45549800 45550436 -100038852 + L1M4b LINE L1 1029 1676 -5183 276 279 196 6 chr10 45550485 45550664 -100038624 + L1M4b LINE L1 1611 1823 -5032 22 0 0 0 chr10 45551213 45551235 -100038053 + AT_rich Low_complexity Low_complexity 1 22 0 343 276 26 13 chr10 45551483 45551635 -100037653 + L1ME3 LINE L1 5835 5988 -572 255 283 58 52 chr10 45551739 45551912 -100037376 + L1ME3 LINE L1 6144 6317 -239 708 236 14 0 chr10 45552960 45553108 -100036180 - MER5A DNA MER1_type 0 189 40 187 250 196 11 chr10 45553521 45553613 -100035675 + MIR SINE MIR 84 192 -70 226 254 111 16 chr10 45553882 45553945 -100035343 + MIR SINE MIR 37 105 -157 333 322 44 49 chr10 45556344 45556527 -100032761 - MIR3 SINE MIR 0 208 27 200 329 14 14 chr10 45557120 45557193 -100032095 - MER5B DNA MER1_type -103 75 3 480 287 84 42 chr10 45558043 45558078 -100031210 - L3 LINE CR1 -14 1563 1531 1909 181 37 32 chr10 45558078 45558509 -100030779 + Tigger2a DNA MER2_type 2 434 0 480 287 84 42 chr10 45558509 45558642 -100030646 - L3 LINE CR1 -46 1531 1380 216 0 0 0 chr10 45558642 45558666 -100030622 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 480 287 84 42 chr10 45558666 45558733 -100030555 - L3 LINE CR1 -197 1380 1317 276 329 37 12 chr10 45559245 45559406 -100029882 - L3 LINE CR1 -764 813 649 364 297 47 3 chr10 45560804 45560939 -100028349 + MIR3 SINE MIR 63 205 -3 307 39 20 39 chr10 45561871 45561922 -100027366 + L1PB4 LINE L1 6105 6154 -2 240 304 27 34 chr10 45562634 45562782 -100026506 - L1M4 LINE L1 -2196 3950 3804 377 235 52 0 chr10 45562787 45562902 -100026386 - MLT1J2 LTR MaLR -2 448 328 189 0 0 0 chr10 45563409 45563430 -100025858 + (TTTAA)n Simple_repeat Simple_repeat 1 21 0 399 365 6 36 chr10 45564487 45564549 -100024739 + MIR SINE MIR 3 65 -197 1714 183 72 14 chr10 45564549 45564894 -100024394 - MLT1A1 LTR MaLR 0 365 1 399 365 6 36 chr10 45564894 45564998 -100024290 + MIR SINE MIR 65 164 -98 4826 166 14 24 chr10 45567048 45568395 -100020893 - L1MA7 LINE L1 -10 6281 4946 3554 195 11 2 chr10 45568392 45569191 -100020097 - L1MA7 LINE L1 -2091 4055 3250 * 557 226 18 12 chr10 45569204 45569368 -100019920 - L1M4 LINE L1 -3261 2885 2721 30 0 0 0 chr10 45570114 45570144 -100019144 + AT_rich Low_complexity Low_complexity 1 30 0 322 298 67 113 chr10 45570571 45571004 -100018284 + L1MC4 LINE L1 16 428 -6114 8683 241 74 49 chr10 45571062 45574402 -100014886 + L1MC4 LINE L1 485 3530 -3114 2375 74 17 0 chr10 45574402 45574699 -100014589 + AluY SINE Alu 1 302 -9 8683 241 74 49 chr10 45574699 45577130 -100012158 + L1MC4 LINE L1 3530 5899 -745 2159 202 54 32 chr10 45576752 45577311 -100011977 + L1MB8 LINE L1 6097 6667 -9 * 1386 264 137 17 chr10 45577832 45578359 -100010929 - MLT1G LTR MaLR 0 590 1 26 0 0 0 chr10 45578738 45578764 -100010524 + AT_rich Low_complexity Low_complexity 1 26 0 234 0 0 0 chr10 45579319 45579345 -100009943 + (A)n Simple_repeat Simple_repeat 1 26 0 250 257 124 19 chr10 45579854 45579959 -100009329 + MIR SINE MIR 88 203 -59 2241 117 0 10 chr10 45580227 45580535 -100008753 + AluSx SINE Alu 1 305 -7 1670 246 117 58 chr10 45580620 45581210 -100008078 + MLT1E2 LTR MaLR 1 625 -1 22 0 0 0 chr10 45581299 45581321 -100007967 + AT_rich Low_complexity Low_complexity 1 22 0 1602 184 7 45 chr10 45582047 45582357 -100006931 + AluJb SINE Alu 1 298 -14 23 78 0 0 chr10 45582546 45582597 -100006691 + AT_rich Low_complexity Low_complexity 1 51 0 2594 250 36 64 chr10 45582750 45583085 -100006203 + L1MD2 LINE L1 93 436 -5960 1692 184 14 3 chr10 45583085 45583379 -100005909 - AluJb SINE Alu -15 297 1 2594 250 36 64 chr10 45583379 45583823 -100005465 + L1MD2 LINE L1 436 891 -5505 376 75 0 45 chr10 45583823 45583890 -100005398 + (TCTA)n Simple_repeat Simple_repeat 2 65 0 2594 250 36 64 chr10 45583890 45585098 -100004190 + L1MD2 LINE L1 891 2250 -4146 261 250 70 10 chr10 45585183 45585283 -100004005 - MER113 DNA MER1_type? -415 106 1 257 367 95 14 chr10 45586066 45586276 -100003012 + MIR SINE MIR 36 262 0 981 191 123 0 chr10 45586419 45586696 -100002592 + MER33 DNA MER1_type 13 323 -1 183 250 0 0 chr10 45588306 45588358 -100000930 + (TATATG)n Simple_repeat Simple_repeat 4 55 0 317 245 12 25 chr10 45588365 45588528 -100000760 + (CATA)n Simple_repeat Simple_repeat 2 162 0 2399 167 54 2 chr10 45590555 45590962 -99998326 + MSTA LTR MaLR 1 428 0 4622 228 57 29 chr10 45591197 45592957 -99996331 + L1MD2 LINE L1 4618 6426 -2 2153 98 0 3 chr10 45593036 45593322 -99995966 - AluY SINE Alu -4 307 23 185 304 18 0 chr10 45593497 45593553 -99995735 - L2 LINE L2 -1 3312 3256 579 355 8 16 chr10 45594188 45594430 -99994858 + MIR SINE MIR 2 241 -21 628 118 0 0 chr10 45596927 45597012 -99992276 + MER57A-int LTR ERV1 7059 7143 -394 636 175 40 8 chr10 45597015 45597141 -99992147 + LTR54B LTR ERV1 3 132 -366 1274 184 19 45 chr10 45597141 45597408 -99991880 + MER57A-int LTR ERV1 7277 7536 -1 507 134 12 0 chr10 45597409 45597491 -99991797 + MER57A LTR ERV1 1 83 -320 270 186 169 0 chr10 45597514 45597573 -99991715 + L1M4b LINE L1 30 98 -6761 1316 140 0 0 chr10 45597584 45597794 -99991494 + AluSq SINE Alu 100 309 0 2566 308 32 30 chr10 45597794 45598694 -99990594 + L1M4b LINE L1 97 998 -5861 1991 260 39 57 chr10 45599203 45600406 -99988882 + L1M4b LINE L1 1222 2406 -4553 509 263 37 59 chr10 45600538 45600962 -99988326 + L1M4b LINE L1 2473 2840 -4117 244 191 0 0 chr10 45601005 45601047 -99988241 - U2 snRNA snRNA -146 42 1 2078 237 42 26 chr10 45601049 45601748 -99987540 + L1M4b LINE L1 2921 3603 -3354 3594 243 44 80 chr10 45601848 45602276 -99987012 - L1 LINE L1 -3476 2874 2432 213 39 0 0 chr10 45602276 45602302 -99986986 + (TC)n Simple_repeat Simple_repeat 2 27 0 721 187 0 41 chr10 45602306 45602429 -99986859 - FLAM_C SINE Alu -15 118 1 3594 243 44 80 chr10 45602429 45604860 -99984428 - L1 LINE L1 -3921 2429 468 2904 201 85 58 chr10 45604860 45606088 -99983200 + MER52A LTR ERV1 1 716 -304 343 58 19 39 chr10 45606062 45606114 -99983174 + MER52A LTR ERV1 1207 1257 -498 * 306 73 0 0 chr10 45606123 45606164 -99983124 + (TCTCCC)n Simple_repeat Simple_repeat 1 41 0 2793 185 4 49 chr10 45606179 45606710 -99982578 + MER52A LTR ERV1 1249 1755 0 1628 249 40 40 chr10 45606711 45607160 -99982128 - L1 LINE L1 -5811 470 22 416 268 161 0 chr10 45607608 45607796 -99981492 - MIR SINE MIR -30 232 18 1037 184 66 0 chr10 45608007 45608219 -99981069 + MIR SINE MIR 32 257 -5 311 278 0 0 chr10 45608904 45608976 -99980312 + L2 LINE L2 3237 3308 -5 200 268 110 94 chr10 45609530 45609657 -99979631 - MIR SINE MIR -54 208 80 268 351 91 26 chr10 45610859 45611013 -99978275 - L2 LINE L2 -8 3264 3101 224 405 0 0 chr10 45611920 45612031 -99977257 - MIR3 SINE MIR -11 197 87 465 280 81 27 chr10 45612411 45612597 -99976691 + L2 LINE L2 3118 3313 0 245 288 0 0 chr10 45613086 45613152 -99976136 + GA-rich Low_complexity Low_complexity 2 67 0 180 358 46 18 chr10 45613309 45613418 -99975870 - L2 LINE L2 -2511 803 692 511 330 110 32 chr10 45614721 45615314 -99973974 + L1MC/D LINE L1 2175 2813 -3333 418 243 248 14 chr10 45615363 45615581 -99973707 + L1MC4a LINE L1 5687 5955 -1853 201 273 0 0 chr10 45615581 45615636 -99973652 + (TA)n Simple_repeat Simple_repeat 2 56 0 3175 237 29 11 chr10 45615838 45616787 -99972501 + L1MC/D LINE L1 4472 5434 -746 2843 272 130 35 chr10 45616927 45619232 -99970056 + L1M4 LINE L1 2761 5300 -846 22 35 0 0 chr10 45619635 45619664 -99969624 + AT_rich Low_complexity Low_complexity 1 29 0 207 0 0 0 chr10 45619824 45619847 -99969441 + (TA)n Simple_repeat Simple_repeat 2 24 0 2309 108 0 10 chr10 45619847 45620161 -99969127 - AluSx SINE Alu -1 311 1 719 297 48 7 chr10 45620162 45620431 -99968857 - L1ME3A LINE L1 -297 5873 5594 2082 107 38 3 chr10 45620505 45620796 -99968492 - AluSg SINE Alu -9 301 1 580 227 47 17 chr10 45620797 45620969 -99968319 + MER104 DNA Tc2 2 178 -2 342 289 90 60 chr10 45622676 45622842 -99966446 - MIR SINE MIR -71 191 21 641 66 11 0 chr10 45622980 45623071 -99966217 + (GGAA)n Simple_repeat Simple_repeat 3 94 0 360 0 0 0 chr10 45624097 45624137 -99965151 + (CA)n Simple_repeat Simple_repeat 2 41 0 224 219 20 75 chr10 45625482 45625628 -99963660 + (CAGGG)n Simple_repeat Simple_repeat 3 140 0 * 259 290 0 48 chr10 45625585 45625771 -99963517 + G-rich Low_complexity Low_complexity 2 178 0 230 365 7 7 chr10 45625707 45625855 -99963433 + (GGGTG)n Simple_repeat Simple_repeat 4 151 0 * 396 274 133 56 chr10 45626417 45627179 -99962109 - L1ME3A LINE L1 -962 5184 4365 12440 92 1 2 chr10 45627385 45630283 -99959005 - L1PA8 LINE L1 0 6172 3276 26 0 0 0 chr10 45630290 45630316 -99958972 + AT_rich Low_complexity Low_complexity 1 26 0 35 54 0 0 chr10 45630486 45630542 -99958746 + AT_rich Low_complexity Low_complexity 1 56 0 415 315 116 24 chr10 45630649 45631071 -99958217 - L1ME3A LINE L1 -2143 4003 3543 31 26 0 0 chr10 45631264 45631302 -99957986 + AT_rich Low_complexity Low_complexity 1 38 0 1719 180 0 23 chr10 45631339 45631644 -99957644 + AluJo SINE Alu 3 300 -12 348 292 140 24 chr10 45631682 45632309 -99956979 - L1ME3A LINE L1 -3169 2977 2278 303 347 71 5 chr10 45632320 45632516 -99956772 - LTR33A LTR ERVL -13 510 302 413 261 164 29 chr10 45632820 45633058 -99956230 - L1ME LINE L1 -370 5794 5525 458 192 0 0 chr10 45633331 45633409 -99955879 + AluJ/FLAM SINE Alu 1 78 -234 * 603 215 0 42 chr10 45633408 45633552 -99955736 + AluJo/FRAM SINE Alu 171 308 -4 289 307 45 17 chr10 45633554 45633730 -99955558 + L1M4 LINE L1 2749 2929 -3217 641 290 92 45 chr10 45634243 45635646 -99953642 + L1MEc LINE L1 1030 2511 -3885 15136 145 31 13 chr10 45635795 45638350 -99950938 + Tigger2 DNA MER2_type 83 2684 -34 961 288 108 19 chr10 45638429 45639143 -99950145 + L1MEc LINE L1 2704 3497 -2718 2313 113 0 0 chr10 45639143 45639453 -99949835 + AluY SINE Alu 1 310 -1 961 288 108 19 chr10 45639453 45639531 -99949757 + L1MEc LINE L1 3497 3567 -2648 903 192 110 39 chr10 45639611 45639939 -99949349 - L1ME LINE L1 -618 5548 5206 1677 160 6 39 chr10 45639939 45640251 -99949037 - AluJb SINE Alu 0 312 11 903 192 110 39 chr10 45640251 45640284 -99949004 - L1ME LINE L1 -960 5206 5177 1800 86 114 0 chr10 45640316 45640571 -99948717 - AluSp SINE Alu -25 288 5 1049 235 132 31 chr10 45640590 45641015 -99948273 + L1M4 LINE L1 4699 5166 -980 21 36 0 0 chr10 45641896 45641924 -99947364 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr10 45642098 45642129 -99947159 + AT_rich Low_complexity Low_complexity 1 31 0 669 187 18 58 chr10 45643116 45643287 -99946001 - MIR SINE MIR -2 260 97 739 236 79 0 chr10 45643479 45643644 -99945644 + MER45A DNA AcHobo 1 178 0 190 275 113 0 chr10 45644306 45644386 -99944902 + L2 LINE L2 3179 3267 -46 1704 182 6 50 chr10 45644632 45644995 -99944293 + MER7A DNA MER2_type 2 346 0 462 215 209 0 chr10 45645335 45645498 -99943790 + LTR50 LTR ERVL 57 253 -542 241 258 0 16 chr10 45645550 45645612 -99943676 + L1M4 LINE L1 2647 2707 -3439 201 147 0 0 chr10 45645614 45645648 -99943640 + (TA)n Simple_repeat Simple_repeat 2 35 0 306 285 96 35 chr10 45645793 45645966 -99943322 + L1M4 LINE L1 2874 3035 -3111 2161 98 3 3 chr10 45645966 45646287 -99943001 - AluSp SINE Alu 0 321 1 306 285 96 35 chr10 45646287 45646487 -99942801 + L1M4 LINE L1 3035 3271 -2875 361 322 83 0 chr10 45646755 45646876 -99942412 - L2 LINE L2 -1 3312 3182 834 196 35 6 chr10 45647068 45647241 -99942047 + MER3 DNA MER1_type 1 131 -78 1297 307 122 19 chr10 45647611 45648600 -99940688 - L2 LINE L2 -9 3304 2201 351 304 61 37 chr10 45648604 45648913 -99940375 + L1M4 LINE L1 3638 3957 -2189 230 220 165 22 chr10 45648940 45649031 -99940257 + L1MC4a LINE L1 5674 5777 -2031 244 335 65 0 chr10 45649046 45649201 -99940087 + L1MC4a LINE L1 5803 5967 -1841 2237 115 0 0 chr10 45649218 45649513 -99939775 - AluSx SINE Alu -17 295 1 309 28 0 0 chr10 45649618 45649654 -99939634 + L1PA7 LINE L1 6069 6104 -50 432 255 51 19 chr10 45649772 45649929 -99939359 + MER103 DNA DNA 2 163 -3 2464 134 48 24 chr10 45649962 45650380 -99938908 - MSTA LTR MaLR 0 428 1 2108 128 0 0 chr10 45651116 45651414 -99937874 + AluSx SINE Alu 5 302 -10 1028 115 0 0 chr10 45651451 45651590 -99937698 - L1PA10 LINE L1 -23 6145 6007 1626 103 45 4 chr10 45651592 45651835 -99937453 + AluSx SINE Alu 56 308 -4 24 32 0 0 chr10 45652095 45652126 -99937162 + AT_rich Low_complexity Low_complexity 1 31 0 2207 70 0 40 chr10 45652157 45652456 -99936832 + AluSg SINE Alu 2 288 -22 1368 79 0 123 chr10 45652559 45652814 -99936474 + AluSg/x SINE Alu 92 318 0 2298 90 0 0 chr10 45653141 45653430 -99935858 + AluY SINE Alu 1 289 -22 201 188 0 42 chr10 45654894 45654942 -99934346 - L2 LINE L2 -4 3309 3264 432 332 71 5 chr10 45655013 45655209 -99934079 - MIR SINE MIR -31 231 23 327 221 118 29 chr10 45655289 45655425 -99933863 + MIR SINE MIR 71 218 -44 6002 67 53 20 chr10 45655591 45656426 -99932862 + SVA Other Other 515 1376 -10 29 0 0 0 chr10 45656426 45656455 -99932833 + AT_rich Low_complexity Low_complexity 1 29 0 2212 126 0 0 chr10 45656465 45656767 -99932521 + AluSq SINE Alu 2 303 -10 1860 94 49 11 chr10 45656769 45657034 -99932254 + AluSg SINE Alu 1 275 -35 260 213 0 0 chr10 45657432 45657493 -99931795 + T-rich Low_complexity Low_complexity 1 61 0 250 144 0 30 chr10 45657867 45657922 -99931366 - L1M2 LINE L1 -565 5732 5683 1222 157 51 22 chr10 45658436 45658689 -99930599 + L1MA5A LINE L1 4134 4397 -1749 4821 136 28 7 chr10 45658689 45659516 -99929772 + L1MA5A LINE L1 5450 6297 0 1222 157 51 22 chr10 45659516 45659536 -99929752 + L1MA5A LINE L1 4397 4415 -1731 7511 30 0 0 chr10 45659708 45661349 -99927939 - L1PA4 LINE L1 -2 6153 4515 4780 201 33 15 chr10 45661752 45663181 -99926107 - L1MCa LINE L1 -2591 3835 2434 1947 130 7 0 chr10 45663181 45663457 -99925831 + AluSx SINE Alu 1 278 -34 351 0 0 0 chr10 45663459 45663498 -99925790 + (TAA)n Simple_repeat Simple_repeat 3 41 0 4780 201 33 15 chr10 45663498 45664229 -99925059 - L1MCa LINE L1 -3992 2434 1541 292 361 62 79 chr10 45664599 45664954 -99924334 - L2 LINE L2 0 3272 2924 199 359 23 30 chr10 45664997 45665128 -99924160 - L2 LINE L2 -557 2757 2628 185 354 0 13 chr10 45666258 45666337 -99922951 - MIR SINE MIR -136 126 49 8319 224 84 40 chr10 45666407 45666662 -99922626 - L1MB4 LINE L1 -1 6677 6435 1819 165 80 34 chr10 45666662 45667075 -99922213 + MSTB1 LTR MaLR 1 432 0 8319 224 84 40 chr10 45667075 45668789 -99920499 - L1MB4 LINE L1 -243 6435 4799 185 0 0 39 chr10 45668789 45668815 -99920473 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 2133 107 0 0 chr10 45668815 45669085 -99920203 - AluSx SINE Alu -40 272 3 8319 224 84 40 chr10 45669085 45669532 -99919756 - L1MB4 LINE L1 -1879 4799 4373 2506 61 0 3 chr10 45669532 45669843 -99919445 - AluY SINE Alu -1 310 1 8319 224 84 40 chr10 45669843 45670073 -99919215 - L1MB4 LINE L1 -2305 4373 4155 2173 113 3 0 chr10 45670073 45670364 -99918924 - AluSx SINE Alu -20 292 1 8319 224 84 40 chr10 45670364 45671343 -99917945 - L1MB4 LINE L1 -2523 4155 3221 243 61 0 0 chr10 45671343 45671376 -99917912 + (CA)n Simple_repeat Simple_repeat 1 33 0 8319 224 84 40 chr10 45671376 45673981 -99915307 - L1MB4 LINE L1 -3457 3221 734 3485 122 23 0 chr10 45673981 45674548 -99914740 + L1MA5A LINE L1 5718 6297 0 8319 224 84 40 chr10 45674548 45674592 -99914696 - L1MB4 LINE L1 -5944 734 693 2205 114 7 0 chr10 45674592 45674898 -99914390 - AluSp SINE Alu -5 308 1 8319 224 84 40 chr10 45674898 45674977 -99914311 - L1MB4 LINE L1 -5985 693 1 22 0 0 0 chr10 45675592 45675614 -99913674 + AT_rich Low_complexity Low_complexity 1 22 0 4819 222 114 17 chr10 45677145 45678368 -99910920 + L1M4 LINE L1 7 1348 -5511 2470 230 39 52 chr10 45678353 45679218 -99910070 + L1M4 LINE L1 4337 5190 -1767 * 1121 248 56 25 chr10 45679281 45679729 -99909559 + L1M4 LINE L1 5163 5624 -1333 246 216 0 14 chr10 45679756 45679830 -99909458 + L1MB8 LINE L1 6105 6177 -1 1158 278 75 76 chr10 45680074 45681571 -99907717 + L1ME3 LINE L1 1660 3154 -3984 607 252 10 34 chr10 45681549 45681841 -99907447 + L1ME3 LINE L1 6460 6820 -153 * 232 261 0 22 chr10 45681927 45682019 -99907269 + L1MC4 LINE L1 6614 6703 -1339 304 265 0 88 chr10 45682033 45682135 -99907153 + L1ME3 LINE L1 6877 6969 -4 186 103 0 0 chr10 45682825 45682854 -99906434 + (TG)n Simple_repeat Simple_repeat 2 30 0 2243 41 24 10 chr10 45683183 45683474 -99905814 + AluY SINE Alu 1 295 -16 216 246 0 18 chr10 45683570 45683627 -99905661 + CT-rich Low_complexity Low_complexity 4 59 0 29050 138 11 60 chr10 45684390 45690884 -99898404 - L1PA8 LINE L1 -4 6168 4 258 247 0 0 chr10 45691338 45691415 -99897873 + CT-rich Low_complexity Low_complexity 2 78 0 478 183 54 0 chr10 45692325 45692418 -99896870 + MLT2D LTR ERVL 6 103 -311 341 282 75 48 chr10 45692507 45692695 -99896593 + L2 LINE L2 2928 3120 -193 422 261 166 20 chr10 45692915 45693114 -99896174 + L1MC/D LINE L1 3904 4131 -2015 419 246 120 26 chr10 45693118 45693309 -99895979 + L1ME3A LINE L1 5953 6161 -9 241 291 60 46 chr10 45693327 45693478 -99895810 + L1MC/D LINE L1 5731 5883 -1925 2094 132 0 43 chr10 45697301 45697626 -99891662 - MER1B DNA MER1_type -1 338 28 695 260 64 0 chr10 45697776 45697949 -99891339 - MER5A DNA MER1_type 0 189 6 238 232 18 0 chr10 45698607 45698663 -99890625 + (TATATG)n Simple_repeat Simple_repeat 3 59 0 6319 111 61 16 chr10 45698669 45699708 -99889580 + Tigger3b DNA MER2_type 144 1228 -3 351 227 0 0 chr10 45699735 45699832 -99889456 + (TA)n Simple_repeat Simple_repeat 1 97 0 5496 39 2 0 chr10 45700323 45700964 -99888324 - L1PA4 LINE L1 -3 6152 5511 2107 105 0 10 chr10 45701260 45701556 -99887732 - AluSc SINE Alu -16 293 1 268 257 9 46 chr10 45701701 45701810 -99887478 - L1 LINE L1 -2329 3817 3713 406 307 74 25 chr10 45702020 45702264 -99887024 - LTR16C LTR ERVL -8 483 228 1034 293 42 9 chr10 45703295 45703626 -99885662 + L2 LINE L2 2958 3299 -14 4766 107 3 0 chr10 45703940 45704622 -99884666 - L1PA7 LINE L1 -1101 5045 4362 7141 61 2 0 chr10 45704623 45705717 -99883571 + L1PA7 LINE L1 5051 6146 -8 2357 178 64 2 chr10 45706183 45706638 -99882650 + MER31A LTR ERV1 1 483 -2 202 308 46 0 chr10 45707122 45707187 -99882101 - MIR SINE MIR -60 148 81 188 283 139 46 chr10 45708023 45708196 -99881092 - L2 LINE L2 -187 3085 2897 244 258 147 74 chr10 45709334 45709524 -99879764 + MIR SINE MIR 57 260 -2 605 253 119 40 chr10 45709665 45710044 -99879244 + LTR16A LTR ERVL 16 424 -26 600 233 69 0 chr10 45711336 45711495 -99877793 - MLT1K LTR MaLR -8 580 411 2623 144 21 30 chr10 45711607 45711967 -99877321 - MSTB LTR MaLR 0 426 69 2354 123 19 136 chr10 45711967 45712432 -99876856 + LTR46 LTR ERV1 1 400 -60 252 0 0 0 chr10 45712432 45712460 -99876828 + (TC)n Simple_repeat Simple_repeat 1 28 0 2354 123 19 136 chr10 45712460 45712515 -99876773 + LTR46 LTR ERV1 400 460 0 2623 144 21 30 chr10 45712515 45712584 -99876704 - MSTB LTR MaLR -357 69 1 282 301 93 60 chr10 45712616 45712832 -99876456 - MLT1K LTR MaLR -365 223 1 1546 142 35 11 chr10 45713723 45713983 -99875305 + MSTB LTR MaLR 125 390 -36 195 384 40 0 chr10 45714879 45714978 -99874310 + L2 LINE L2 2579 2681 -633 471 300 42 11 chr10 45715017 45715207 -99874081 - MIR SINE MIR -35 227 32 1012 252 17 8 chr10 45715261 45715499 -99873789 + L1MD2 LINE L1 24 263 -6146 * 2787 243 39 21 chr10 45715491 45717047 -99872241 + L1MD2 LINE L1 4471 6052 -567 1278 218 59 78 chr10 45717051 45717473 -99871815 - MLT2B1 LTR ERVL 0 414 1 1613 226 83 21 chr10 45717473 45717809 -99871479 + L1MD2 LINE L1 6052 6428 -191 297 0 0 0 chr10 45717809 45717842 -99871446 + (CA)n Simple_repeat Simple_repeat 2 34 0 1613 226 83 21 chr10 45717842 45717984 -99871304 + L1MD2 LINE L1 6428 6560 -59 2083 146 37 37 chr10 45717984 45718362 -99870926 + MSTA LTR MaLR 51 428 0 329 333 73 20 chr10 45718539 45718743 -99870545 + L2 LINE L2 2239 2453 -861 785 212 24 18 chr10 45719030 45719200 -99870088 - MER5B DNA MER1_type -7 171 1 205 329 61 0 chr10 45719214 45719296 -99869992 + L2 LINE L2 3224 3310 -3 191 361 36 0 chr10 45720176 45720259 -99869029 - L2 LINE L2 -3 3269 3184 1517 258 101 33 chr10 45720667 45720873 -99868415 + L1MC4a LINE L1 5301 5492 -2316 1770 191 40 32 chr10 45720873 45721244 -99868044 + MLT1A2 LTR MaLR 1 374 0 1517 258 101 33 chr10 45721244 45721614 -99867674 + L1MC4a LINE L1 5492 5916 -1892 434 284 0 43 chr10 45721740 45721856 -99867432 - MER5B DNA MER1_type -18 160 50 228 304 53 82 chr10 45722517 45722688 -99866600 - MLT1J2 LTR MaLR -36 475 274 302 258 43 0 chr10 45722751 45722844 -99866444 - MLT1J2 LTR MaLR -324 126 30 314 316 72 40 chr10 45723984 45724136 -99865152 - L2 LINE L2 0 3272 3116 186 261 87 29 chr10 45724335 45724404 -99864884 - MIR SINE MIR -109 153 81 415 260 150 59 chr10 45725206 45725579 -99863709 + MLT1J1 LTR MaLR 26 432 -14 2149 108 16 0 chr10 45727541 45727846 -99861442 + AluSq SINE Alu 2 311 -2 243 114 0 0 chr10 45728167 45728211 -99861077 + (CA)n Simple_repeat Simple_repeat 1 44 0 204 270 225 0 chr10 45732211 45732300 -99856988 + MIR SINE MIR 154 262 0 189 232 110 49 chr10 45732292 45732374 -99856914 - MIR SINE MIR -107 155 69 * 435 261 35 57 chr10 45732534 45732736 -99856552 + L1MC4a LINE L1 5688 5886 -1922 1873 191 69 16 chr10 45732736 45733170 -99856118 + MSTB2 LTR MaLR 1 457 0 435 261 35 57 chr10 45733170 45733197 -99856091 + L1MC4a LINE L1 5886 5912 -1896 282 241 0 0 chr10 45733231 45733289 -99855999 - Tigger5 DNA MER2_type 0 2323 2266 309 243 0 14 chr10 45733361 45733435 -99855853 - Tigger5 DNA MER2_type 0 2323 2251 270 163 0 20 chr10 45733403 45733452 -99855836 - Tigger5 DNA MER2_type -2268 55 8 * 2505 259 108 19 chr10 45733455 45734631 -99854657 + L1MDa LINE L1 18 1384 -5156 1864 121 132 17 chr10 45734660 45735164 -99854124 - MER51A LTR ERV1 -9 625 1 4500 174 72 22 chr10 45735168 45736379 -99852909 + L1MDa LINE L1 1403 2671 -3869 406 247 11 0 chr10 45736433 45736522 -99852766 + Tigger5 DNA MER2_type 2234 2323 0 1327 230 22 30 chr10 45736540 45737001 -99852287 + L1MDa LINE L1 2693 3149 -3391 603 159 0 63 chr10 45737003 45737129 -99852159 - FLAM_C SINE Alu -5 138 21 5893 256 38 31 chr10 45737129 45739768 -99849520 + L1MDa LINE L1 3136 5794 -746 786 254 0 23 chr10 45739778 45739998 -99849290 + L1MD1 LINE L1 2567 2781 -3365 385 217 40 40 chr10 45740042 45740194 -99849094 + L1MD1 LINE L1 3658 3809 -2337 8983 197 32 35 chr10 45740242 45741388 -99847900 + L1PA16 LINE L1 2797 3945 -2221 6757 22 16 0 chr10 45741388 45742175 -99847113 + L1PA4 LINE L1 5348 6147 -8 207 0 0 0 chr10 45742178 45742201 -99847087 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 8983 197 32 35 chr10 45742201 45743800 -99845488 + L1PA16 LINE L1 3947 5529 -637 2177 107 7 0 chr10 45743800 45744098 -99845190 + AluY SINE Alu 1 300 -11 8983 197 32 35 chr10 45744098 45744728 -99844560 + L1PA16 LINE L1 5529 6160 -6 3097 201 35 3 chr10 45744736 45745427 -99843861 + L1MD1 LINE L1 5416 6128 -114 413 232 10 0 chr10 45745507 45745606 -99843682 + L1MD1 LINE L1 6123 6222 -20 2047 162 26 26 chr10 45745612 45746070 -99843218 + L1MB3 LINE L1 5711 6168 -15 916 241 94 0 chr10 45746168 45746434 -99842854 + L1MDb LINE L1 750 1040 -5369 21 0 0 0 chr10 45746614 45746635 -99842653 + AT_rich Low_complexity Low_complexity 1 21 0 583 335 22 0 chr10 45746950 45747219 -99842069 + L1MDa LINE L1 66 340 -6200 279 239 42 0 chr10 45747638 45747709 -99841579 + L1MDa LINE L1 330 403 -6140 3650 247 46 24 chr10 45748066 45749448 -99839840 + L1MDa LINE L1 825 2272 -4268 6141 25 1 0 chr10 45749448 45750169 -99839119 + L1PA2 LINE L1 5434 6155 0 3650 247 46 24 chr10 45750169 45751058 -99838230 + L1MDa LINE L1 2272 3140 -3400 2394 90 3 0 chr10 45751093 45751394 -99837894 + AluSp SINE Alu 12 313 0 682 236 71 31 chr10 45751440 45751862 -99837426 - L1M4 LINE L1 -5088 1192 558 1788 228 39 18 chr10 45752172 45752634 -99836654 + L1MB5 LINE L1 1035 1513 -4871 1570 208 91 10 chr10 45752634 45753028 -99836260 + MSTB LTR MaLR 1 426 0 1788 228 39 18 chr10 45753028 45753123 -99836165 + L1MB5 LINE L1 1513 1604 -4780 1670 205 54 8 chr10 45753158 45753752 -99835536 + L1MB5 LINE L1 1964 2582 -3800 236 61 0 0 chr10 45753755 45753788 -99835500 + MSTB LTR MaLR 104 136 -321 749 265 12 0 chr10 45753795 45754044 -99835244 - L1M4 LINE L1 -3264 2882 2631 1652 175 3 7 chr10 45754070 45754367 -99834921 + MSTB LTR MaLR 131 426 0 3669 239 20 19 chr10 45754440 45755580 -99833708 + L1MB5 LINE L1 3603 4743 -1639 3166 226 47 14 chr10 45755840 45755892 -99833396 + L1MB5 LINE L1 4732 4781 -1629 2261 112 0 3 chr10 45755892 45756196 -99833092 + AluSp SINE Alu 1 303 -10 3166 226 47 14 chr10 45756196 45757768 -99831520 + L1MB5 LINE L1 4781 6402 -8 3706 204 58 29 chr10 45757787 45758804 -99830484 + L1MD2 LINE L1 5296 6342 -17 301 263 200 0 chr10 45758914 45759104 -99830184 + L1MC5 LINE L1 6633 6860 -1101 12500 51 6 0 chr10 45759105 45761466 -99827822 + L1PA5 LINE L1 3773 6147 -7 27 29 0 0 chr10 45761466 45761500 -99827788 + AT_rich Low_complexity Low_complexity 1 34 0 237 72 0 159 chr10 45761731 45761800 -99827488 + L1MC5 LINE L1 6878 6935 -1026 2158 207 78 70 chr10 45761824 45762211 -99827077 + L1MD3 LINE L1 6711 7093 -902 267 182 91 80 chr10 45762211 45762299 -99826989 + MLT1F1 LTR MaLR 35 123 -444 2158 207 78 70 chr10 45762299 45762608 -99826680 + L1MD3 LINE L1 7093 7398 -597 2517 129 21 0 chr10 45762608 45762988 -99826300 - MLT1B LTR MaLR -2 388 1 2158 207 78 70 chr10 45762988 45763264 -99826024 + L1MD3 LINE L1 7398 7995 0 1535 130 9 0 chr10 45763529 45763745 -99825543 + AluSp SINE Alu 82 299 -14 530 319 113 0 chr10 45763822 45764007 -99825281 + MIR SINE MIR 6 211 -51 24 53 0 0 chr10 45764028 45764066 -99825222 + AT_rich Low_complexity Low_complexity 1 38 0 318 257 105 20 chr10 45764146 45764298 -99824990 - MIR SINE MIR -14 248 84 491 289 168 38 chr10 45764305 45764651 -99824637 + MLT1J2 LTR MaLR 1 391 -59 302 278 62 64 chr10 45765040 45765307 -99823981 + MLT1H1 LTR MaLR 26 306 -249 300 211 156 0 chr10 45765354 45765444 -99823844 + MLT1H1 LTR MaLR 452 555 0 755 256 163 13 chr10 45765639 45765866 -99823422 + MIR SINE MIR 2 262 0 284 253 49 11 chr10 45765969 45766088 -99823200 + MLT1H1 LTR MaLR 32 191 -358 631 297 47 4 chr10 45766152 45766384 -99822904 + MLT1H1 LTR MaLR 302 543 -12 325 278 102 19 chr10 45768453 45768561 -99820727 + MIR SINE MIR 113 229 -33 206 325 51 84 chr10 45769017 45769299 -99819989 - L3 LINE CR1 -108 1469 1179 183 42 0 0 chr10 45769299 45769323 -99819965 + (TTGG)n Simple_repeat Simple_repeat 2 25 0 206 325 51 84 chr10 45769323 45769618 -99819670 - L3 LINE CR1 -398 1179 858 50 59 0 0 chr10 45769765 45769850 -99819438 + AT_rich Low_complexity Low_complexity 1 85 0 275 219 14 27 chr10 45769850 45769923 -99819365 + (TATATG)n Simple_repeat Simple_repeat 3 74 0 242 211 308 29 chr10 45769951 45770055 -99819233 - Tigger7 DNA MER2_type -1 2486 2354 2584 189 38 20 chr10 45770111 45770662 -99818626 - MER44D DNA MER2_type -144 561 1 200 314 0 0 chr10 45772663 45772714 -99816574 + MIR SINE MIR 99 149 -59 1964 145 36 38 chr10 45772752 45773117 -99816171 + THE1B LTR MaLR 1 364 0 376 176 132 11 chr10 45773257 45773348 -99815940 + MIR SINE MIR 158 259 -3 969 137 193 67 chr10 45774025 45774325 -99814963 - L1MA8 LINE L1 -6 6285 5948 242 298 165 11 chr10 45776588 45776776 -99812512 + L2 LINE L2 3018 3234 -38 245 257 50 50 chr10 45776961 45777062 -99812226 + MIR SINE MIR 35 135 -73 180 258 43 21 chr10 45778392 45778485 -99810803 - MIR SINE MIR -87 175 81 5543 178 44 47 chr10 45779289 45780685 -99808603 - L1MD2 LINE L1 0 6359 4964 1748 251 108 15 chr10 45780691 45781672 -99807616 - L1MDa LINE L1 -3600 2940 1865 5458 202 39 23 chr10 45781714 45782519 -99806769 + L1MB7 LINE L1 3943 4734 -1450 2931 7 0 0 chr10 45782519 45782828 -99806460 + AluYb8 SINE Alu 1 309 -9 5458 202 39 23 chr10 45782828 45784230 -99805058 + L1MB7 LINE L1 4734 6184 0 1730 193 46 24 chr10 45784603 45785046 -99804242 - L1MB7 LINE L1 -15 6169 5720 * 2152 262 82 24 chr10 45785039 45785916 -99803372 - L1M4c LINE L1 -3221 3423 2598 1699 65 0 14 chr10 45785916 45786132 -99803156 - AluSg/x SINE Alu -1 308 96 2152 262 82 24 chr10 45786132 45787104 -99802184 - L1M4c LINE L1 -4046 2598 1344 1323 179 0 60 chr10 45787117 45787368 -99801920 + AluJo SINE Alu 38 273 -39 606 127 28 21 chr10 45787375 45787517 -99801771 + GA-rich Low_complexity Low_complexity 1 143 0 204 40 0 0 chr10 45787517 45787542 -99801746 + (GGGA)n Simple_repeat Simple_repeat 1 25 0 6928 151 68 7 chr10 45787549 45788736 -99800552 + HSMAR2 DNA Mariner 42 1301 -1 22443 76 6 1 chr10 45788780 45792564 -99796724 - L1PA6 LINE L1 -5 6149 2349 625 56 0 0 chr10 45792767 45792865 -99796423 + L1PA2 LINE L1 11 380 -6081 * 38188 34 25 1 chr10 45792832 45798268 -99791020 + L1PA2 LINE L1 893 6464 -6 14744 136 10 21 chr10 45798393 45800770 -99788518 - L1PA6 LINE L1 -3785 2361 11 346 197 26 0 chr10 45800779 45800855 -99788433 - L1M4c LINE L1 -5248 1294 1217 31 0 0 0 chr10 45800864 45800895 -99788393 + AT_rich Low_complexity Low_complexity 1 31 0 1887 217 31 117 chr10 45800929 45801725 -99787563 - L1M4c LINE L1 -5330 1212 485 293 319 119 8 chr10 45801983 45802234 -99787054 + L2 LINE L2 2124 2402 -912 22 0 0 0 chr10 45803108 45803130 -99786158 + AT_rich Low_complexity Low_complexity 1 22 0 194 151 0 94 chr10 45805018 45805071 -99784217 - L2 LINE L2 -1 3312 3265 201 154 0 0 chr10 45805297 45805336 -99783952 + (CATA)n Simple_repeat Simple_repeat 2 40 0 275 236 94 9 chr10 45805338 45805444 -99783844 + L1ME4a LINE L1 6007 6121 0 2193 268 82 24 chr10 45805551 45806412 -99782876 - L1MDb LINE L1 -5489 920 10 2183 120 0 0 chr10 45806513 45806804 -99782484 + AluSq SINE Alu 1 291 -22 2488 192 19 15 chr10 45806805 45807330 -99781958 - L1MB7 LINE L1 -44 6140 5614 715 166 152 0 chr10 45807328 45807473 -99781815 + L1MB8 LINE L1 5819 5985 -193 * 497 148 19 37 chr10 45807493 45807601 -99781687 + L1MB8 LINE L1 6073 6178 0 2412 101 0 0 chr10 45808922 45809228 -99780060 + AluSg SINE Alu 1 306 -4 449 291 148 40 chr10 45809661 45810012 -99779276 - Charlie8 DNA MER1_type -1938 479 91 456 263 158 24 chr10 45810952 45811530 -99777758 + L2 LINE L2 2654 3301 -12 188 258 54 65 chr10 45811639 45811732 -99777556 + MIR SINE MIR 80 171 -91 560 210 36 67 chr10 45811797 45812021 -99777267 - MER20 DNA MER1_type -2 217 1 927 282 91 43 chr10 45813228 45813646 -99775642 - L2 LINE L2 -4 3309 2872 227 321 37 0 chr10 45814050 45814131 -99775157 - MER91A DNA MER1_type -8 188 105 2058 231 49 28 chr10 45814655 45815162 -99774126 - LTR40a LTR ERVL 0 519 2 4071 158 23 12 chr10 45816300 45817028 -99772260 + L1MB3 LINE L1 5447 6182 -1 221 335 4 89 chr10 45817984 45818148 -99771140 - L2 LINE L2 -527 2787 2651 1265 208 38 119 chr10 45818148 45818654 -99770634 - MLT1C LTR MaLR -2 465 1 221 335 4 89 chr10 45818654 45818746 -99770542 - L2 LINE L2 -663 2651 2553 2056 120 24 0 chr10 45819549 45819840 -99769448 + AluSx SINE Alu 1 298 -14 386 316 77 5 chr10 45819896 45820092 -99769196 + MIR SINE MIR 24 233 -29 242 208 31 123 chr10 45820458 45820588 -99768700 + MIR SINE MIR 35 152 -110 344 337 41 0 chr10 45821275 45821444 -99767844 + MIR3 SINE MIR 22 197 -11 5854 208 50 29 chr10 45822805 45824208 -99765080 - L1MC3 LINE L1 0 7785 6353 9281 123 21 10 chr10 45824210 45825861 -99763427 + L1PA10 LINE L1 3825 5496 -672 2138 72 0 19 chr10 45825861 45826126 -99763162 + AluY SINE Alu 35 294 -17 9281 123 21 10 chr10 45826126 45826416 -99762872 + L1PA10 LINE L1 5496 5781 -387 20325 106 11 39 chr10 45826427 45832845 -99756443 + L1PA7 LINE L1 12 6154 0 2661 104 12 17 chr10 45832845 45833249 -99756039 + L1PA10 LINE L1 5767 6168 0 1801 217 27 18 chr10 45833249 45833696 -99755592 - L1MC3 LINE L1 -1422 6363 5913 525 189 27 149 chr10 45833712 45833934 -99755354 + MLT1E2-int LTR MaLR 1176 1370 -1 300 195 183 12 chr10 45833935 45834017 -99755271 + MLT1E2 LTR MaLR 1 96 -530 187 93 47 23 chr10 45834129 45834172 -99755116 + A-rich Low_complexity Low_complexity 1 44 0 728 152 76 21 chr10 45834173 45834318 -99754970 + MLT1D LTR MaLR 353 505 0 1672 229 22 64 chr10 45834318 45834820 -99754468 - L1MCa LINE L1 -1137 5289 4809 768 163 14 35 chr10 45834823 45834964 -99754324 + MER1B DNA MER1_type 2 139 -158 465 162 40 0 chr10 45834962 45835036 -99754252 - MLT1D LTR MaLR -76 429 353 * 187 93 47 23 chr10 45835037 45835080 -99754208 + T-rich Low_complexity Low_complexity 1 44 0 1146 138 5 32 chr10 45835232 45835420 -99753868 + MER1B DNA MER1_type 141 323 -16 6103 241 57 40 chr10 45835437 45837711 -99751577 - L1MCa LINE L1 -1620 4806 2495 419 197 0 0 chr10 45837712 45837778 -99751510 - AluJ/FRAM SINE Alu -31 281 216 696 204 114 4 chr10 45837783 45838028 -99751260 - L1MCa LINE L1 -3961 2465 2194 * 7873 23 0 1 chr10 45838025 45838965 -99750323 - L1PA3 LINE L1 0 6155 5254 10284 36 0 0 chr10 45838973 45840184 -99749104 + L1P LINE L1 3882 5092 -1054 367 231 115 0 chr10 45840180 45840284 -99749004 - L1MCa LINE L1 -4219 2207 2092 * 238 280 41 12 chr10 45840371 45840473 -99748815 - MIR SINE MIR -58 150 48 243 322 70 9 chr10 45840836 45840951 -99748337 - MIR3 SINE MIR -72 136 15 387 0 0 0 chr10 45842170 45842213 -99747075 + (TG)n Simple_repeat Simple_repeat 2 44 0 343 315 160 28 chr10 45843475 45843945 -99745343 - L2 LINE L2 -54 3259 2727 222 239 14 14 chr10 45844134 45844205 -99745083 - L2 LINE L2 -1528 1786 1716 227 295 19 0 chr10 45844296 45844401 -99744887 - L2 LINE L2 -1612 1702 1596 259 294 56 42 chr10 45844506 45844720 -99744568 - L2 LINE L2 -204 3068 2852 1266 131 0 0 chr10 45846212 45846410 -99742878 + L1PB1 LINE L1 1 198 -6665 * 14409 184 41 15 chr10 45846406 45849117 -99740171 + L1PB1 LINE L1 995 3632 -3235 1705 139 4 0 chr10 45849117 45849369 -99739919 + AluSg SINE Alu 54 306 -4 14409 184 41 15 chr10 45849369 45849750 -99739538 + L1PB1 LINE L1 3632 4001 -2866 246 32 0 0 chr10 45849750 45849781 -99739507 + (CAA)n Simple_repeat Simple_repeat 3 33 0 14409 184 41 15 chr10 45849781 45850075 -99739213 + L1PB1 LINE L1 4001 4286 -2581 3771 103 2 4 chr10 45850075 45850587 -99738701 - MER9 LTR ERVK 0 511 1 14409 184 41 15 chr10 45850587 45852718 -99736570 + L1PB1 LINE L1 4286 6863 -4 184 328 43 9 chr10 45855354 45855470 -99733818 - MIR SINE MIR -123 139 20 234 0 0 0 chr10 45857001 45857027 -99732261 + (TGAA)n Simple_repeat Simple_repeat 2 27 0 2215 117 0 10 chr10 45857192 45857518 -99731770 - AluSx SINE Alu 0 312 1 405 289 39 32 chr10 45859926 45860082 -99729206 + MIR SINE MIR 39 195 -67 237 143 0 0 chr10 45860815 45860850 -99728438 + U2 snRNA snRNA 2 36 -152 219 271 243 14 chr10 45861713 45861857 -99727431 - MIR SINE MIR -65 197 21 563 243 70 0 chr10 45862519 45862704 -99726584 - L1MDb LINE L1 -4706 1834 1637 2001 163 30 22 chr10 45862704 45862789 -99726499 + MLT1A1 LTR MaLR 1 84 -281 1171 227 104 48 chr10 45862789 45863164 -99726124 - MSTD LTR MaLR 0 396 1 2001 163 30 22 chr10 45863164 45863440 -99725848 + MLT1A1 LTR MaLR 84 365 0 1812 215 14 15 chr10 45863440 45863959 -99725329 - L1MDb LINE L1 -4899 1641 1109 1840 222 8 10 chr10 45863959 45864341 -99724947 + MLT2D LTR ERVL 1 480 -40 276 137 42 21 chr10 45864341 45864436 -99724852 + (TA)n Simple_repeat Simple_repeat 2 98 0 469 208 67 8 chr10 45864454 45864574 -99724714 - L1MDb LINE L1 -6101 442 316 420 37 0 0 chr10 45864584 45864638 -99724650 + (CA)n Simple_repeat Simple_repeat 1 54 0 293 98 0 0 chr10 45864638 45864679 -99724609 + MLT2D LTR ERVL 480 520 0 788 167 108 0 chr10 45864718 45864904 -99724384 - L1MDb LINE L1 -5483 926 721 227 243 34 182 chr10 45864981 45865129 -99724159 - L1MDb LINE L1 -5802 607 482 549 313 31 21 chr10 45865238 45865430 -99723858 - L1MDb LINE L1 -5753 656 463 1936 257 60 19 chr10 45865443 45866012 -99723276 - L1MDb LINE L1 -5790 619 28 1858 169 57 35 chr10 45866074 45866517 -99722771 - L1MB7 LINE L1 -15 6169 5720 * 2200 264 85 23 chr10 45866510 45867387 -99721901 - L1MCa LINE L1 -3221 3205 2383 1699 65 0 14 chr10 45867387 45867603 -99721685 - AluSg/x SINE Alu -1 308 96 2200 264 85 23 chr10 45867603 45868575 -99720713 - L1MCa LINE L1 -4043 2383 1126 1323 179 0 60 chr10 45868588 45868839 -99720449 + AluJo SINE Alu 38 273 -39 606 127 28 21 chr10 45868846 45868988 -99720300 + GA-rich Low_complexity Low_complexity 1 143 0 204 40 0 0 chr10 45868988 45869013 -99720275 + (GGGA)n Simple_repeat Simple_repeat 1 25 0 6928 151 68 7 chr10 45869020 45870207 -99719081 + HSMAR2 DNA Mariner 42 1301 -1 35886 106 10 9 chr10 45870252 45876387 -99712901 - L1PA6 LINE L1 -5 6149 11 352 280 70 20 chr10 45876398 45876598 -99712690 - L1MCa LINE L1 -5221 1205 996 305 152 30 0 chr10 45876804 45876870 -99712418 + CT-rich Low_complexity Low_complexity 4 71 0 474 325 24 5 chr10 45877370 45877576 -99711712 + L2 LINE L2 2804 3013 -300 1736 206 105 33 chr10 45877903 45878330 -99710958 + MLT1C LTR MaLR 4 461 -6 571 241 98 25 chr10 45879109 45879354 -99709934 + L1MCc LINE L1 33 295 -6128 896 197 5 26 chr10 45879363 45879556 -99709732 - MER65B LTR ERV1 -7 524 336 2529 113 13 16 chr10 45879556 45880187 -99709101 + L1PA15 LINE L1 4987 5618 -547 282 132 57 0 chr10 45880988 45881041 -99708247 - L1P4 LINE L1 -467 5698 5643 2958 155 27 6 chr10 45881059 45881576 -99707712 + L1PA15 LINE L1 5635 6162 -3 741 259 44 33 chr10 45881611 45881881 -99707407 - MER65B LTR ERV1 -206 325 53 206 362 75 0 chr10 45882085 45882259 -99707029 + L2 LINE L2 2697 2883 -431 1059 281 49 25 chr10 45882847 45883502 -99705786 + L1MCc LINE L1 1051 1720 -4891 34243 109 8 9 chr10 45883513 45889661 -99699627 + L1PA7 LINE L1 11 6154 0 1941 271 53 33 chr10 45889651 45890521 -99698767 + L1MCc LINE L1 1914 2800 -4322 * 345 337 11 0 chr10 45890521 45890610 -99698678 + L1MC4 LINE L1 6614 6703 -1339 314 321 0 12 chr10 45890547 45890631 -99698657 - L1MC4 LINE L1 -1339 6703 6621 * 21 36 0 0 chr10 45891742 45891770 -99697518 + AT_rich Low_complexity Low_complexity 1 28 0 197 296 0 0 chr10 45892016 45892070 -99697218 - L2 LINE L2 -13 3259 3206 981 314 83 91 chr10 45892859 45894541 -99694747 + L1MCc LINE L1 2909 4576 -2365 292 304 114 30 chr10 45896639 45896840 -99692448 + MIR SINE MIR 25 242 -20 467 164 10 0 chr10 45897587 45897691 -99691597 + C-rich Low_complexity Low_complexity 2 106 0 564 186 9 9 chr10 45901226 45901449 -99687839 + (TGGA)n Simple_repeat Simple_repeat 1 223 0 455 244 0 6 chr10 45901473 45901637 -99687651 + (TGGA)n Simple_repeat Simple_repeat 3 165 0 433 171 8 68 chr10 45902441 45902558 -99686730 - MER53 DNA DNA -7 182 73 279 197 28 0 chr10 45902586 45902657 -99686631 + MER53 DNA DNA 117 189 0 3294 181 37 39 chr10 45903183 45903591 -99685697 + MER21B LTR ERV1 1 444 -419 2443 94 0 0 chr10 45903591 45903890 -99685398 - AluSq SINE Alu -14 299 1 3294 181 37 39 chr10 45903890 45904261 -99685027 + MER21B LTR ERV1 444 814 -49 255 252 76 30 chr10 45905384 45905515 -99683773 + MER113 DNA MER1_type? 7 143 -378 26 74 0 0 chr10 45905555 45905609 -99683679 + AT_rich Low_complexity Low_complexity 1 54 0 2561 40 0 3 chr10 45906171 45906525 -99682763 - AluY SINE Alu 0 311 1 238 318 16 0 chr10 45906734 45906797 -99682491 + L2 LINE L2 3203 3266 -6 360 111 0 0 chr10 45907378 45907432 -99681856 + (TGGG)n Simple_repeat Simple_repeat 2 55 0 212 174 22 0 chr10 45908770 45908816 -99680472 + (CCCCG)n Simple_repeat Simple_repeat 2 48 0 237 65 0 0 chr10 45908903 45908934 -99680354 + (CCCG)n Simple_repeat Simple_repeat 4 34 0 189 0 0 0 chr10 45910697 45910718 -99678570 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 183 80 0 0 chr10 45912054 45912079 -99677209 + (A)n Simple_repeat Simple_repeat 1 25 0 204 369 27 9 chr10 45924609 45924720 -99664568 + MIR SINE MIR 34 146 -62 1889 128 20 43 chr10 45926034 45926379 -99662909 - MER1B DNA MER1_type 0 337 1 1767 308 173 28 chr10 45927118 45927393 -99661895 + L2 LINE L2 1119 1353 -1960 1753 97 23 0 chr10 45927393 45927651 -99661637 + L1PA13 LINE L1 5900 6163 0 1767 308 173 28 chr10 45927651 45928370 -99660918 + L2 LINE L2 1353 1967 -1346 2587 81 0 0 chr10 45928370 45928680 -99660608 - AluSx SINE Alu -2 310 1 1767 308 173 28 chr10 45928680 45929591 -99659697 + L2 LINE L2 1967 3307 -6 271 292 31 21 chr10 45930180 45930276 -99659012 - MIR SINE MIR -151 111 15 228 35 0 0 chr10 45931554 45931583 -99657705 + (ATG)n Simple_repeat Simple_repeat 1 29 0 189 257 243 7 chr10 45932513 45932653 -99656635 - MIR SINE MIR 0 262 90 216 0 0 0 chr10 45934303 45934327 -99654961 + (A)n Simple_repeat Simple_repeat 1 24 0 280 295 53 0 chr10 45936316 45936411 -99652877 + MER5B DNA MER1_type 79 178 0 390 262 135 0 chr10 45936419 45936545 -99652743 - MER5A DNA MER1_type 0 189 47 183 167 0 0 chr10 45937535 45937577 -99651711 + GA-rich Low_complexity Low_complexity 1 42 0 186 255 0 0 chr10 45937578 45937629 -99651659 + (CA)n Simple_repeat Simple_repeat 2 52 0 184 306 171 33 chr10 45937720 45937962 -99651326 + L2 LINE L2 2214 2508 -806 258 32 0 0 chr10 45937962 45937993 -99651295 + (CA)n Simple_repeat Simple_repeat 1 31 0 184 306 171 33 chr10 45937993 45938054 -99651234 + L2 LINE L2 2508 2559 -755 252 143 0 0 chr10 45938137 45938179 -99651109 + (TG)n Simple_repeat Simple_repeat 1 42 0 467 210 0 20 chr10 45938837 45938937 -99650351 + LTR33 LTR ERVL 424 521 0 362 306 121 7 chr10 45939270 45939476 -99649812 + MIR SINE MIR 8 252 -10 266 347 41 12 chr10 45940515 45940685 -99648603 + L2 LINE L2 2683 2857 -457 276 337 12 18 chr10 45941612 45941781 -99647507 + GA-rich Low_complexity Low_complexity 2 169 0 2095 134 3 10 chr10 45942210 45942524 -99646764 + AluSx SINE Alu 1 312 0 853 68 54 7 chr10 45942561 45942709 -99646579 + GA-rich Low_complexity Low_complexity 2 156 0 323 287 5 25 chr10 45942732 45942855 -99646433 + MIR SINE MIR 68 185 -56 340 329 35 14 chr10 45943172 45943225 -99646063 - MIR SINE MIR -54 208 158 2308 172 31 13 chr10 45943225 45943614 -99645674 + MSTD LTR MaLR 1 396 0 340 329 35 14 chr10 45943614 45943703 -99645585 - MIR SINE MIR -104 158 63 227 299 48 80 chr10 45943952 45944139 -99645149 - MLT1K LTR MaLR -396 192 12 224 333 83 21 chr10 45944247 45944343 -99644945 + L2 LINE L2 3123 3224 -48 273 363 56 34 chr10 45944385 45944564 -99644724 - L2 LINE L2 -570 2744 2562 218 377 41 0 chr10 45947532 45947654 -99641634 - MIR SINE MIR -28 234 108 850 242 102 46 chr10 45947748 45947970 -99641318 + MER74B LTR ERVL 66 321 -301 1959 177 40 6 chr10 45947970 45948321 -99640967 + MLT1A1 LTR MaLR 3 365 0 850 242 102 46 chr10 45948321 45948490 -99640798 + MER74B LTR ERVL 321 479 -143 267 294 83 9 chr10 45950169 45950278 -99639010 - L3 LINE CR1 -758 819 703 1161 88 0 0 chr10 45950290 45950437 -99638851 + AluSg/x SINE Alu 166 312 0 723 275 64 28 chr10 45951624 45951951 -99637337 - MLT1G LTR MaLR 0 590 252 1749 212 35 0 chr10 45951976 45952336 -99636952 + MLT2D LTR ERVL 1 376 -38 396 0 0 0 chr10 45952336 45952380 -99636908 + (CA)n Simple_repeat Simple_repeat 2 45 0 1749 212 35 0 chr10 45952380 45952396 -99636892 + MLT2D LTR ERVL 376 390 -24 332 173 40 13 chr10 45952500 45952575 -99636713 - MLT1G LTR MaLR -500 90 14 529 256 191 10 chr10 45953150 45953449 -99635839 - MLT1G3 LTR MaLR -197 333 1 328 315 34 34 chr10 45953459 45953608 -99635680 - MIR SINE MIR -112 150 2 652 138 297 0 chr10 45954032 45954170 -99635118 + MER5A DNA MER1_type 4 182 -7 263 252 65 47 chr10 45954199 45954306 -99634982 - L2 LINE L2 -553 2761 2653 223 227 76 0 chr10 45954701 45954767 -99634521 + MIR SINE MIR 127 197 -65 267 221 176 0 chr10 45954836 45954904 -99634384 - L2 LINE L2 0 3272 3193 212 381 57 21 chr10 45954961 45955155 -99634133 + MIR SINE MIR 15 215 -47 1961 156 92 6 chr10 45957016 45957374 -99631914 - MLT1B LTR MaLR -1 389 1 329 235 227 8 chr10 45958491 45958623 -99630665 - MIR SINE MIR 0 262 102 424 234 11 0 chr10 45960082 45960176 -99629112 - Tigger7 DNA MER2_type 0 2487 2393 264 274 12 0 chr10 45960177 45960261 -99629027 - MLT1A1 LTR MaLR -202 163 79 * 722 268 49 5 chr10 45960248 45960453 -99628835 + MLT1A1 LTR MaLR 152 365 0 210 310 115 0 chr10 45961542 45961655 -99627633 + MIR SINE MIR 133 258 -4 263 303 64 18 chr10 45962151 45962260 -99627028 + MIR SINE MIR 34 147 -61 286 259 0 0 chr10 45962402 45962429 -99626859 + (TA)n Simple_repeat Simple_repeat 1 27 -58 1356 173 17 0 chr10 45962429 45962660 -99626628 + MER46A DNA MER2_type 1 235 -1 286 259 0 0 chr10 45962660 45962691 -99626597 + (TA)n Simple_repeat Simple_repeat 27 62 -23 2076 207 5 10 chr10 45962691 45963087 -99626201 + MSTD LTR MaLR 1 394 -2 286 259 0 0 chr10 45963087 45963112 -99626176 + (TA)n Simple_repeat Simple_repeat 61 85 0 250 240 0 0 chr10 45963196 45963246 -99626042 + MIR SINE MIR 71 120 -142 4650 226 52 61 chr10 45963405 45963836 -99625452 - L1MDa LINE L1 -2215 4325 3891 2150 129 0 3 chr10 45963836 45964130 -99625158 - AluSg SINE Alu -17 293 1 4650 226 52 61 chr10 45964130 45964410 -99624878 - L1MDa LINE L1 -2649 3891 3610 2409 110 33 36 chr10 45964410 45964775 -99624513 - THE1B LTR MaLR 0 364 1 4650 226 52 61 chr10 45964775 45966016 -99623272 - L1MDa LINE L1 -2930 3610 2390 285 314 34 57 chr10 45967285 45967460 -99621828 - L2 LINE L2 -345 2969 2799 205 243 0 0 chr10 45968023 45968060 -99621228 + polypyrimidine Low_complexity Low_complexity 3 39 0 245 313 34 9 chr10 45968588 45968699 -99620589 - MIR SINE MIR -60 148 72 182 290 28 84 chr10 45968832 45968939 -99620349 - L2 LINE L2 0 3313 3213 733 238 101 4 chr10 45969094 45969372 -99619916 - MLT1D LTR MaLR -4 501 172 1315 51 16 13 chr10 45969408 45969728 -99619560 + (TTTC)n Simple_repeat Simple_repeat 1 321 0 1671 178 22 0 chr10 45969735 45970005 -99619283 - AluJo SINE Alu -36 276 1 460 138 156 81 chr10 45970007 45970167 -99619121 - MLT1D LTR MaLR -292 175 4 354 329 64 16 chr10 45970418 45970646 -99618642 + MIR SINE MIR 1 238 -24 1530 124 12 20 chr10 45971059 45971293 -99617995 + MSTC LTR MaLR 1 234 -194 1350 119 25 30 chr10 45971293 45971528 -99617760 + L1MC1 LINE L1 6100 6333 0 1530 124 12 20 chr10 45971528 45971542 -99617746 + MSTC LTR MaLR 234 247 -181 3528 201 66 20 chr10 45972411 45972573 -99616715 - L1MB7 LINE L1 -121 6063 5910 378 0 0 0 chr10 45972573 45972615 -99616673 + (TA)n Simple_repeat Simple_repeat 2 43 0 3528 201 66 20 chr10 45972615 45973934 -99615354 - L1MB7 LINE L1 -274 5910 4491 2087 139 20 0 chr10 45973934 45974229 -99615059 - AluSx SINE Alu -11 301 1 3528 201 66 20 chr10 45974229 45974401 -99614887 - L1MB7 LINE L1 -1693 4491 4328 1840 136 47 6 chr10 45974411 45974728 -99614560 - MER44D DNA MER2_type -8 601 2 1054 250 31 12 chr10 45974741 45975061 -99614227 - L1MB7 LINE L1 -1831 4315 3990 304 260 0 50 chr10 45977119 45977300 -99611988 + G-rich Low_complexity Low_complexity 3 174 0 1250 89 0 0 chr10 45978347 45978504 -99610784 - AluSc SINE Alu -1 308 152 180 355 88 37 chr10 45978689 45978906 -99610382 + L2 LINE L2 2954 3181 -91 579 271 45 35 chr10 45978994 45979193 -99610095 - MIR SINE MIR -32 230 30 339 290 160 8 chr10 45979265 45979396 -99609892 + MIR SINE MIR 74 224 -38 264 274 89 57 chr10 45979396 45979520 -99609768 - MER96 DNA MER1_type? -1 174 47 1719 93 5 0 chr10 45980242 45980457 -99608831 - AluSx SINE Alu -94 218 3 243 326 109 27 chr10 45980557 45980704 -99608584 + MIR SINE MIR 36 194 -68 200 282 70 0 chr10 45980847 45980918 -99608370 - MIR3 SINE MIR -23 185 110 240 241 0 0 chr10 45981624 45981682 -99607606 + L3 LINE CR1 403 460 -1117 486 299 125 21 chr10 45982236 45982661 -99606627 + L3 LINE CR1 1032 1500 -77 2680 170 45 12 chr10 45983960 45984453 -99604835 + MLT2B2 LTR ERVL 1 509 -6 260 169 0 17 chr10 45984457 45984516 -99604772 + CT-rich Low_complexity Low_complexity 4 61 0 2236 187 45 39 chr10 45985807 45986320 -99602968 + MER74A LTR ERVL 43 558 0 2268 154 49 7 chr10 45986833 45987243 -99602045 + MSTB1 LTR MaLR 6 432 0 34 42 0 0 chr10 45988178 45988226 -99601062 + AT_rich Low_complexity Low_complexity 1 48 0 272 157 71 0 chr10 45988226 45988296 -99600992 - L1MB3 LINE L1 -22 6161 6087 8541 161 37 49 chr10 45988313 45989336 -99599952 - L1MA4 LINE L1 -292 6008 4974 189 0 0 0 chr10 45989336 45989357 -99599931 + (ATTTG)n Simple_repeat Simple_repeat 3 23 0 8541 161 37 49 chr10 45989357 45989614 -99599674 - L1MA4 LINE L1 -1326 4974 4715 1892 164 16 39 chr10 45989614 45989998 -99599290 - THE1C LTR MaLR 0 375 1 8541 161 37 49 chr10 45989998 45991232 -99598056 - L1MA4 LINE L1 -1585 4715 3503 250 265 152 15 chr10 45991368 45991500 -99597788 - MIR SINE MIR -17 245 96 2320 112 67 24 chr10 45994043 45994417 -99594871 + MLT1B LTR MaLR 1 390 0 390 330 28 69 chr10 45995197 45995660 -99593628 - L1M4 LINE L1 -758 5388 4945 395 322 86 46 chr10 45995929 45996534 -99592754 - L1M4 LINE L1 -1890 4256 3628 21 0 0 0 chr10 45997712 45997733 -99591555 + AT_rich Low_complexity Low_complexity 1 21 0 340 216 37 22 chr10 45998131 45998265 -99591023 + (TG)n Simple_repeat Simple_repeat 1 136 0 210 135 53 38 chr10 45998425 45998558 -99590730 + (TG)n Simple_repeat Simple_repeat 1 135 0 216 194 43 54 chr10 45998580 45998673 -99590615 + (GTGTG)n Simple_repeat Simple_repeat 1 92 0 270 223 29 14 chr10 45998711 45998850 -99590438 + (TG)n Simple_repeat Simple_repeat 1 141 0 1603 199 130 19 chr10 45999111 45999543 -99589745 - MER21B LTR ERV1 -9 854 375 210 246 29 41 chr10 46000779 46000950 -99588338 + (CACCC)n Simple_repeat Simple_repeat 3 171 0 * 424 315 0 22 chr10 46000837 46001021 -99588267 + C-rich Low_complexity Low_complexity 1 180 0 209 270 40 27 chr10 46001655 46001729 -99587559 + MIR SINE MIR 175 249 -13 348 147 0 0 chr10 46001864 46001932 -99587356 - L1MB4 LINE L1 -2 6178 6111 1172 189 59 33 chr10 46001932 46002315 -99586973 - LTR29 LTR ERV1 -70 574 138 271 206 54 43 chr10 46002321 46002413 -99586875 - MER34 LTR ERV1 -449 93 1 4627 139 32 21 chr10 46002422 46003214 -99586074 - MER34-int LTR ERV1 -8 6323 5524 2647 165 119 43 chr10 46003205 46004162 -99585126 - LTR49-int LTR ERV1 -1866 4784 2189 * 314 203 73 65 chr10 46004130 46004253 -99585035 - LTR49-int LTR ERV1 -2698 3633 3510 * 2100 222 108 45 chr10 46004256 46004940 -99584348 + MER50 LTR ERV1 8 734 0 2706 203 86 44 chr10 46004945 46005767 -99583521 - LTR49-int LTR ERV1 -3042 2081 1225 537 301 146 13 chr10 46005767 46006006 -99583282 - MER34C LTR ERV1 -155 430 160 4273 211 50 44 chr10 46006008 46007155 -99582133 - LTR49-int LTR ERV1 -3683 2648 754 1102 146 50 59 chr10 46007858 46008251 -99581037 - LTR23 LTR ERV1 0 437 1 1893 198 12 6 chr10 46008251 46008594 -99580694 - MER21B LTR ERV1 -485 378 34 1539 149 60 37 chr10 46008608 46008966 -99580322 - Tigger3(Golem) DNA MER2_type -10 3019 1 439 288 152 16 chr10 46010184 46010536 -99578752 - L1MC/D LINE L1 -527 5594 5290 250 260 181 11 chr10 46011527 46011704 -99577584 + MIR SINE MIR 56 262 0 227 330 157 17 chr10 46013742 46013972 -99575316 + L1MC/D LINE L1 5522 5783 -2025 21 0 0 0 chr10 46014565 46014586 -99574702 + AT_rich Low_complexity Low_complexity 1 21 0 11230 88 6 0 chr10 46015572 46015903 -99573385 - L1PA7 LINE L1 -3 6151 5823 2398 83 0 0 chr10 46015903 46016205 -99573083 + AluY SINE Alu 1 302 -9 11230 88 6 0 chr10 46016205 46018199 -99571089 - L1PA7 LINE L1 -331 5823 3833 5399 104 6 59 chr10 46018199 46019086 -99570202 - L1PA7 LINE L1 -3604 2542 1703 189 0 0 0 chr10 46019086 46019107 -99570181 + (T)n Simple_repeat Simple_repeat 1 21 0 329 247 28 28 chr10 46019107 46019289 -99569999 + L1MD2 LINE L1 5043 5224 -922 313 211 90 64 chr10 46019315 46019471 -99569817 + L1MD2 LINE L1 5256 5415 -2393 45111 40 0 1 chr10 46019473 46025627 -99563661 - L1PA3 LINE L1 0 6155 7 6455 110 13 14 chr10 46025630 46026812 -99562476 - L1P3 LINE L1 -4423 2038 856 1044 210 15 10 chr10 46026814 46027019 -99562269 - AluJo SINE Alu -19 293 88 762 246 118 57 chr10 46027448 46027888 -99561400 - MLT1C LTR MaLR 0 467 1 461 258 67 27 chr10 46028193 46028358 -99560930 + MIR SINE MIR 34 204 -58 1946 107 11 18 chr10 46028840 46029112 -99560176 + AluSx SINE Alu 34 303 -9 481 245 88 7 chr10 46030383 46030529 -99558759 + MLT1F1 LTR MaLR 1 158 -409 2049 230 157 0 chr10 46030529 46031085 -99558203 - MLT1E1 LTR MaLR 0 654 12 1756 216 14 6 chr10 46031089 46031455 -99557833 + MLT1F1 LTR MaLR 199 567 0 650 203 52 0 chr10 46033740 46033893 -99555395 + MIR SINE MIR 64 224 -38 1872 175 25 28 chr10 46034755 46035109 -99554179 - MLT1A1 LTR MaLR 0 365 13 1360 192 98 1 chr10 46035190 46035507 -99553781 + L1MD2 LINE L1 5986 6359 0 186 43 0 0 chr10 46036541 46036564 -99552724 + (TG)n Simple_repeat Simple_repeat 1 23 0 2134 93 0 0 chr10 46037786 46038054 -99551234 - AluSg SINE Alu -9 301 34 3304 127 10 4 chr10 46038878 46039392 -99549896 - L1PB1 LINE L1 0 6151 5635 6946 69 9 7 chr10 46040377 46041490 -99547798 + L1PA8 LINE L1 5058 6172 0 201 366 65 0 chr10 46041548 46041671 -99547617 + MIR SINE MIR 23 153 -109 273 306 109 11 chr10 46041724 46041907 -99547381 - MIR SINE MIR -8 254 54 212 318 163 23 chr10 46042495 46042624 -99546664 - MIR SINE MIR -70 192 46 215 271 117 75 chr10 46043063 46043251 -99546037 + L2 LINE L2 3118 3313 0 354 61 0 0 chr10 46043458 46043507 -99545781 + (TCTA)n Simple_repeat Simple_repeat 2 50 0 6646 97 22 4 chr10 46043575 46044503 -99544785 + L1PA7 LINE L1 1 944 -5517 17855 95 28 0 chr10 46044503 46047767 -99541521 + L1PA7 LINE L1 3167 6458 -11 576 106 0 0 chr10 46047776 46047861 -99541427 - L1MA2 LINE L1 -4 6300 6216 1591 165 52 13 chr10 46048318 46048627 -99540661 + L1MB2 LINE L1 5848 6168 -3 307 250 89 16 chr10 46048728 46048852 -99540436 - MER94 DNA DNA 0 134 2 338 314 50 0 chr10 46049018 46049139 -99540149 + L2 LINE L2 3138 3264 -8 318 50 0 0 chr10 46049352 46049392 -99539896 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 276 227 64 0 chr10 46050070 46050180 -99539108 - L1M4 LINE L1 -2915 3231 3115 240 219 24 61 chr10 46052683 46052765 -99536523 + L2 LINE L2 3193 3271 -1 181 282 165 12 chr10 46052917 46053002 -99536286 + MIR SINE MIR 113 210 -52 1892 173 36 0 chr10 46053627 46053963 -99535325 - MER7A DNA MER2_type 0 346 1 609 234 42 26 chr10 46054551 46054743 -99534545 + L1ME3 LINE L1 5959 6153 -9 2746 19 7 3 chr10 46054768 46055077 -99534211 + AluY SINE Alu 1 310 -1 269 221 39 0 chr10 46055177 46055254 -99534034 - MER94 DNA DNA 0 134 55 489 299 69 14 chr10 46056080 46056297 -99532991 + MIR SINE MIR 28 256 -6 284 197 17 34 chr10 46056325 46056442 -99532846 + CT-rich Low_complexity Low_complexity 4 118 0 2164 103 7 3 chr10 46057548 46057838 -99531450 - AluSx SINE Alu -21 291 1 215 286 154 0 chr10 46057988 46058079 -99531209 + MIR SINE MIR 46 150 -112 1198 106 0 0 chr10 46058621 46058791 -99530497 + L1MA2 LINE L1 6134 6303 -1 25774 134 19 22 chr10 46059629 46059710 -99529578 + L1PA8A LINE L1 1 81 -6365 344 95 0 16 chr10 46059710 46059773 -99529515 + (TAA)n Simple_repeat Simple_repeat 2 63 0 25774 134 19 22 chr10 46059773 46061229 -99528059 + L1PA8A LINE L1 81 1540 -4906 2018 145 30 0 chr10 46061229 46061532 -99527756 + AluSq SINE Alu 1 312 -1 25774 134 19 22 chr10 46061532 46064843 -99524445 + L1PA8A LINE L1 1540 4860 -1586 252 0 0 0 chr10 46064843 46064871 -99524417 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 6928 66 5 1 chr10 46064871 46066410 -99522878 - L1PA7 LINE L1 -12 6142 4600 25774 134 19 22 chr10 46066410 46067933 -99521355 + L1PA8A LINE L1 4858 6418 -28 505 216 96 12 chr10 46068456 46068623 -99520665 - L1ME3A LINE L1 -5 6559 6379 864 278 25 7 chr10 46068629 46068910 -99520378 - L1ME3A LINE L1 -252 6312 6027 566 283 89 38 chr10 46068922 46069742 -99519546 - L1ME3A LINE L1 -691 5873 5016 430 266 49 60 chr10 46069799 46070148 -99519140 - L1ME3A LINE L1 -2451 4089 3745 442 192 55 55 chr10 46070267 46070413 -99518875 - L1MD3 LINE L1 -14 7981 7836 8184 13 0 1 chr10 46070514 46071807 -99517481 + L1HS LINE L1 4864 6155 0 999 182 73 5 chr10 46071808 46072028 -99517260 - L1ME3A LINE L1 -4269 2271 2037 * 3437 202 67 57 chr10 46072003 46073039 -99516249 - L1ME3A LINE L1 -4707 1833 788 * 13302 170 25 23 chr10 46073036 46073878 -99515410 - L1M2 LINE L1 -743 5291 4452 189 0 0 0 chr10 46073878 46073899 -99515389 + (TG)n Simple_repeat Simple_repeat 2 22 0 13302 170 25 23 chr10 46073899 46075943 -99513345 - L1M2 LINE L1 -1582 4452 2526 920 350 2 28 chr10 46076346 46076775 -99512513 - L1M2 LINE L1 -5537 418 1 253 242 15 0 chr10 46076777 46076843 -99512445 - L1MEc LINE L1 -3844 2285 2219 337 293 37 98 chr10 46076880 46077177 -99512111 - L1MEc LINE L1 -4094 2216 1938 484 272 98 43 chr10 46077408 46077531 -99511757 - L1MEc LINE L1 -4703 1607 1492 2060 143 42 22 chr10 46077531 46077888 -99511400 - THE1B LTR MaLR 0 364 1 11531 96 9 13 chr10 46077888 46079472 -99509816 - THE1B-int LTR MaLR 0 1580 3 2291 138 8 22 chr10 46079473 46079842 -99509446 - THE1B LTR MaLR 0 364 1 484 272 98 43 chr10 46079842 46080156 -99509132 - L1MEc LINE L1 -4817 1493 1143 296 212 109 36 chr10 46080357 46080494 -99508794 - L1MEc LINE L1 -5028 1091 945 180 0 0 0 chr10 46081019 46081039 -99508249 + (T)n Simple_repeat Simple_repeat 1 20 0 695 339 3 16 chr10 46081693 46082003 -99507285 - L2 LINE L2 -1257 2057 1752 361 265 11 22 chr10 46082564 46082638 -99506650 + (TA)n Simple_repeat Simple_repeat 2 75 -105 1806 178 23 26 chr10 46082638 46082980 -99506308 + MER2 DNA MER2_type 2 342 -2 361 265 11 22 chr10 46082980 46083086 -99506202 + (TA)n Simple_repeat Simple_repeat 75 180 0 669 198 28 23 chr10 46083653 46083830 -99505458 - MER45R DNA AcHobo 0 1581 1404 768 208 73 0 chr10 46083961 46084139 -99505149 - MER45 DNA AcHobo -1387 194 4 2931 141 43 54 chr10 46084887 46085447 -99503841 + MLT2B3 LTR ERVL 1 554 0 277 295 101 40 chr10 46085486 46085713 -99503575 - L2 LINE L2 -1008 2306 2066 219 331 71 16 chr10 46085883 46086067 -99503221 - MIR SINE MIR -13 249 56 213 274 0 0 chr10 46086244 46086306 -99502982 + MIR SINE MIR 13 74 -188 199 341 24 12 chr10 46087600 46087685 -99501603 + MIR SINE MIR 57 142 -120 26 30 0 0 chr10 46087896 46087929 -99501359 + AT_rich Low_complexity Low_complexity 1 33 0 190 228 109 40 chr10 46087966 46088067 -99501221 - MIR SINE MIR -54 208 101 901 224 84 22 chr10 46088706 46089028 -99500260 + LTR37A LTR ERV1 85 426 0 2305 119 3 3 chr10 46089547 46089858 -99499430 - AluSp SINE Alu -2 311 1 245 277 128 11 chr10 46089917 46090011 -99499277 + MLT1K LTR MaLR 141 245 -343 398 281 80 60 chr10 46090085 46090284 -99499004 + MLT1K LTR MaLR 331 533 -55 254 178 68 27 chr10 46090358 46090431 -99498857 + MIR SINE MIR 101 176 -86 781 162 78 0 chr10 46090593 46090735 -99498553 + MLT1A1 LTR MaLR 204 356 -9 1414 228 65 50 chr10 46091408 46091790 -99497498 - MSTD LTR MaLR -8 388 1 2319 109 0 6 chr10 46092338 46092651 -99496637 - AluSx SINE Alu -1 311 1 1731 194 48 14 chr10 46092656 46093027 -99496261 - MLT1B LTR MaLR 0 390 7 1582 159 52 15 chr10 46096627 46096943 -99492345 + AluJb SINE Alu 1 326 0 780 156 10 23 chr10 46096953 46097251 -99492037 + L1MA8 LINE L1 5920 6289 -2 2114 158 38 0 chr10 46098963 46099336 -99489952 + MLT1B LTR MaLR 4 390 0 209 182 0 0 chr10 46099467 46099500 -99489788 + (CA)n Simple_repeat Simple_repeat 1 33 0 233 344 25 6 chr10 46101106 46101263 -99488025 - L2 LINE L2 -279 2993 2834 290 304 9 26 chr10 46101590 46101705 -99487583 + CT-rich Low_complexity Low_complexity 3 115 0 4680 131 113 7 chr10 46101708 46102531 -99486757 - L1MC1 LINE L1 0 6333 5424 3467 201 48 19 chr10 46102548 46102885 -99486403 - L1ME1 LINE L1 -3 6163 5827 990 243 71 51 chr10 46102885 46103433 -99485855 - L1PA16 LINE L1 -338 5828 5270 6070 58 0 1 chr10 46103435 46104179 -99485109 - L1PA5 LINE L1 -2 6152 5410 4915 240 62 46 chr10 46104189 46104384 -99484904 - L1ME1 LINE L1 -823 5323 5133 1795 178 0 3 chr10 46104384 46104682 -99484606 - AluJo SINE Alu -15 297 1 4915 240 62 46 chr10 46104682 46106265 -99483023 - L1ME1 LINE L1 -1013 5133 3516 215 265 0 44 chr10 46107986 46108054 -99481234 + L2 LINE L2 3186 3250 -22 336 180 22 11 chr10 46108503 46108592 -99480696 + CT-rich Low_complexity Low_complexity 4 93 0 669 166 0 43 chr10 46108676 46108863 -99480425 + (CA)n Simple_repeat Simple_repeat 2 180 0 330 301 19 0 chr10 46109712 46109815 -99479473 + MIR SINE MIR 37 141 -121 22 0 0 0 chr10 46110122 46110144 -99479144 + AT_rich Low_complexity Low_complexity 1 22 0 2144 109 7 0 chr10 46111258 46111574 -99477714 - AluSp SINE Alu 0 319 2 2193 94 0 23 chr10 46111675 46112004 -99477284 - AluY SINE Alu 0 311 1 2151 119 0 7 chr10 46112472 46112767 -99476521 + AluSg SINE Alu 1 293 -17 959 207 13 9 chr10 46113878 46114186 -99475102 - MLT1B LTR MaLR -11 379 2 412 341 101 31 chr10 46114386 46114960 -99474328 - L1M4 LINE L1 -1950 4196 3583 1455 179 50 33 chr10 46118208 46118509 -99470779 + AluJo SINE Alu 1 306 -6 229 241 36 12 chr10 46120838 46120921 -99468367 - MIR SINE MIR -115 147 63 704 322 108 58 chr10 46122416 46122518 -99466770 - L1MEd LINE L1 -4909 1210 1114 1488 177 40 7 chr10 46122518 46122838 -99466450 - AluJo SINE Alu 0 329 1 704 322 108 58 chr10 46122838 46123845 -99465443 - L1MEd LINE L1 -5005 1114 45 2100 86 55 31 chr10 46124374 46124666 -99464622 + AluSq SINE Alu 1 299 -14 711 271 69 74 chr10 46126236 46126586 -99462702 - L1MC4a LINE L1 -1908 5900 5553 21 0 0 0 chr10 46126597 46126618 -99462670 + AT_rich Low_complexity Low_complexity 1 21 0 1633 233 152 16 chr10 46126644 46127257 -99462031 - L1MC4a LINE L1 -1948 4198 3503 234 157 137 0 chr10 46127319 46127370 -99461918 + L1ME LINE L1 5647 5704 -466 721 256 19 19 chr10 46127409 46127620 -99461668 - MLT1A1 LTR MaLR 0 365 155 2436 265 61 20 chr10 46127620 46128670 -99460618 - L1MC4a LINE L1 -2638 3508 2416 2987 217 75 79 chr10 46128705 46129751 -99459537 + L1M4 LINE L1 14 1054 -5488 584 146 0 0 chr10 46129745 46129834 -99459454 - L1MB3 LINE L1 -65 6118 6030 * 3287 241 53 23 chr10 46129823 46132187 -99457101 + L1M4 LINE L1 2398 4879 -1765 277 115 115 0 chr10 46132314 46132366 -99456922 + MER21A LTR ERV1 12 69 -862 436 163 22 22 chr10 46132484 46132576 -99456712 + MER21A LTR ERV1 70 161 -770 * 1655 189 58 49 chr10 46132554 46132983 -99456305 + MER21B LTR ERV1 420 852 -11 281 245 181 0 chr10 46133670 46133764 -99455524 - MIR SINE MIR -5 257 147 418 192 83 8 chr10 46133764 46133884 -99455404 - L1MDb LINE L1 -2232 4174 4046 3960 235 75 26 chr10 46133919 46137275 -99452013 - L1MDb LINE L1 -2716 3690 287 305 77 0 0 chr10 46137302 46137354 -99451934 + L1MA3 LINE L1 6252 6303 -2 214 260 146 31 chr10 46137369 46137465 -99451823 + MIR SINE MIR 156 262 0 294 254 0 0 chr10 46137492 46137551 -99451737 + MIR SINE MIR 117 175 -87 498 271 208 8 chr10 46137563 46137799 -99451489 - MLT1G LTR MaLR -8 582 300 2236 123 27 15 chr10 46137799 46138132 -99451156 + MER1B DNA MER1_type 1 337 0 582 292 31 13 chr10 46138180 46138406 -99450882 - L1MDb LINE L1 -6172 237 8 338 190 51 25 chr10 46139181 46139260 -99450028 - MLT2C2 LTR ERVL -236 228 148 653 238 67 23 chr10 46139435 46139734 -99449554 - LTR37A LTR ERV1 -20 406 95 758 217 49 29 chr10 46139950 46140194 -99449094 + Charlie4a DNA MER1_type 164 412 -96 6242 102 5 4 chr10 46140203 46141520 -99447768 - L1PA8 LINE L1 -4 6168 4844 524 122 0 0 chr10 46141521 46141603 -99447685 + L1PA4 LINE L1 2 83 -6063 37002 60 6 2 chr10 46141603 46146579 -99442709 + L1PA4 LINE L1 297 5308 -847 2380 92 0 16 chr10 46146579 46146895 -99442393 + AluY SINE Alu 1 311 0 37002 60 6 2 chr10 46146895 46147740 -99441548 + L1PA4 LINE L1 5308 6148 -7 28 0 0 0 chr10 46147740 46147768 -99441520 + AT_rich Low_complexity Low_complexity 1 28 0 2117 121 0 3 chr10 46147812 46148118 -99441170 - AluY SINE Alu -6 305 1 282 308 186 17 chr10 46148350 46148522 -99440766 + MIR SINE MIR 50 250 -12 297 0 0 0 chr10 46148604 46148637 -99440651 + (TG)n Simple_repeat Simple_repeat 1 33 0 3861 104 2 0 chr10 46148639 46149226 -99440062 - L1P LINE L1 -1286 4860 4273 399 251 68 31 chr10 46149226 46149417 -99439871 + Charlie7 DNA MER1_type 476 673 -1939 240 233 58 12 chr10 46149505 46149591 -99439697 + Charlie7 DNA MER1_type 2521 2610 -2 461 193 58 76 chr10 46149872 46150043 -99439245 + MLT2D LTR ERVL 83 250 -164 638 271 18 35 chr10 46150048 46150277 -99439011 + MIR SINE MIR 25 249 -13 24 0 0 0 chr10 46150995 46151019 -99438269 + AT_rich Low_complexity Low_complexity 1 24 0 24686 37 5 0 chr10 46151026 46154998 -99434290 - L1PA4 LINE L1 -2 6153 2163 12514 66 1 4 chr10 46154987 46156636 -99432652 - L1PA4 LINE L1 -4502 1644 1 * 200 243 0 0 chr10 46156740 46156777 -99432511 + L2 LINE L2 3183 3219 -94 2271 264 35 38 chr10 46157968 46158813 -99430475 - L1MCb LINE L1 -5199 846 4 446 165 57 60 chr10 46158964 46159174 -99430114 - ORSL DNA AcHobo 0 275 9 432 304 112 37 chr10 46160162 46160376 -99428912 + MIR SINE MIR 33 262 0 225 0 0 0 chr10 46161892 46161917 -99427371 + (TA)n Simple_repeat Simple_repeat 2 26 0 1726 254 47 25 chr10 46162002 46162239 -99427049 - L1MEc LINE L1 -2505 3921 3691 1487 185 62 14 chr10 46162239 46162531 -99426757 - AluJb SINE Alu -6 306 1 1726 254 47 25 chr10 46162531 46163010 -99426278 - L1MEc LINE L1 -2735 3691 3189 1532 244 62 25 chr10 46163011 46163835 -99425453 - L1MEc LINE L1 -3459 2967 2177 * 3570 233 41 11 chr10 46163828 46165438 -99423850 + L1ME1 LINE L1 4409 6067 -99 252 112 9 18 chr10 46165443 46165499 -99423789 - MLT2B2 LTR ERVL -7 508 455 460 66 40 0 chr10 46165500 46165576 -99423712 + (TAGA)n Simple_repeat Simple_repeat 3 81 0 241 100 40 0 chr10 46165575 46165625 -99423663 + (ATTG)n Simple_repeat Simple_repeat 3 54 0 * 342 267 0 0 chr10 46165631 46165732 -99423556 - Charlie4 DNA MER1_type -1801 160 60 200 128 26 0 chr10 46165732 46165771 -99423517 + (TA)n Simple_repeat Simple_repeat 1 40 0 1998 200 23 44 chr10 46165780 46166259 -99423029 - MLT2B2 LTR ERVL -46 469 1 405 219 0 0 chr10 46166268 46166364 -99422924 + L1MB7 LINE L1 6081 6176 -8 518 261 20 0 chr10 46166369 46166522 -99422766 - Charlie4 DNA MER1_type -1775 186 31 661 243 61 17 chr10 46166546 46166727 -99422561 - MER5A DNA MER1_type 0 189 1 1173 172 71 0 chr10 46168280 46168547 -99420741 - L1MEc LINE L1 -4425 2001 1716 4747 187 46 67 chr10 46168552 46168706 -99420582 + L1MC3 LINE L1 6450 6606 -1179 1790 184 11 0 chr10 46168706 46168989 -99420299 + AluJo SINE Alu 1 286 -26 4747 187 46 67 chr10 46168989 46169500 -99419788 + L1MC3 LINE L1 6606 7126 -659 233 125 25 0 chr10 46169500 46169540 -99419748 + MLT1F1 LTR MaLR 50 90 -477 4747 187 46 67 chr10 46169540 46170188 -99419100 + L1MC3 LINE L1 7126 7774 -11 297 269 32 96 chr10 46170995 46171151 -99418137 - MIR3 SINE MIR -8 200 55 507 349 46 4 chr10 46171250 46171488 -99417800 - MIR SINE MIR 0 262 15 339 274 59 46 chr10 46171610 46171763 -99417525 + MIR3 SINE MIR 32 186 -22 2119 124 3 10 chr10 46172024 46172322 -99416966 + AluSq SINE Alu 1 296 -17 284 214 71 0 chr10 46172536 46172620 -99416668 - L1ME LINE L1 -304 5817 5728 191 375 78 16 chr10 46172849 46172977 -99416311 - L2 LINE L2 0 3272 3137 427 232 275 7 chr10 46173063 46173201 -99416087 + MIR SINE MIR 88 262 0 1886 205 130 14 chr10 46173204 46173697 -99415591 - MLT1F1 LTR MaLR 0 567 18 1177 171 53 4 chr10 46174060 46174306 -99414982 - Tigger2 DNA MER2_type 0 2718 2461 4048 153 17 13 chr10 46174363 46175110 -99414178 - Tigger2 DNA MER2_type -1968 750 1 313 325 138 21 chr10 46175365 46175553 -99413735 - MIR SINE MIR -45 217 8 481 217 18 60 chr10 46175706 46175872 -99413416 - MER53 DNA DNA 0 189 31 213 369 12 0 chr10 46176941 46177025 -99412263 + L2 LINE L2 3137 3221 -51 334 262 0 56 chr10 46177742 46177868 -99411420 - MER3 DNA MER1_type 0 209 91 43944 50 1 3 chr10 46180952 46187130 -99402158 + L1PA4 LINE L1 2 6167 0 234 209 104 30 chr10 46187134 46187201 -99402087 - L1M4 LINE L1 -1150 4996 4925 259 294 141 0 chr10 46188327 46188419 -99400869 - MER91A DNA MER1_type -2 194 90 4748 166 37 36 chr10 46188427 46189920 -99399368 - L1MB2 LINE L1 0 6171 4676 912 288 86 30 chr10 46190691 46191132 -99398156 - MLT1K LTR MaLR 0 588 123 498 291 85 59 chr10 46191272 46191660 -99397628 - L3 LINE CR1 -52 1525 1128 184 219 0 0 chr10 46191814 46191855 -99397433 - L3 LINE CR1 -607 970 930 243 88 0 0 chr10 46191934 46191968 -99397320 + (TTA)n Simple_repeat Simple_repeat 3 36 0 276 313 94 23 chr10 46191968 46192096 -99397192 - MIR SINE MIR -118 144 8 * 327 332 166 31 chr10 46192087 46192216 -99397072 - L3 LINE CR1 -620 957 847 3301 189 7 16 chr10 46192216 46192783 -99396505 + MER68 LTR ERV1 1 562 0 327 332 166 31 chr10 46192783 46193099 -99396189 - L3 LINE CR1 -730 847 452 3348 234 29 30 chr10 46193396 46194147 -99395141 - L1MB2 LINE L1 -2726 3420 2669 2181 161 31 0 chr10 46194147 46194502 -99394786 + MER47A DNA MER2_type 1 366 0 3348 234 29 30 chr10 46194502 46194769 -99394519 - L1MB2 LINE L1 -3477 2669 2402 2420 88 3 0 chr10 46194769 46195077 -99394211 - AluY SINE Alu -2 309 1 3348 234 29 30 chr10 46195077 46195107 -99394181 - L1MB2 LINE L1 -3744 2402 2373 1446 216 90 13 chr10 46195099 46195563 -99393725 - L1MCa LINE L1 -3948 2616 2229 * 4161 209 42 36 chr10 46195600 46196784 -99392504 - L1MCa LINE L1 -4425 2139 949 38911 87 8 6 chr10 46196793 46202926 -99386362 - L1PA6 LINE L1 -2 6152 11 704 260 71 29 chr10 46202930 46203211 -99386077 - L1MCa LINE L1 -5074 971 679 478 245 48 14 chr10 46203210 46203357 -99385931 - L1MCa LINE L1 -6190 374 223 * 231 264 132 0 chr10 46204133 46204186 -99385102 + tRNA-Asn-AAC tRNA tRNA 12 71 -6 420 311 83 8 chr10 46204514 46204646 -99384642 + L2 LINE L2 3127 3268 -4 2388 137 25 8 chr10 46205064 46205422 -99383866 - THE1B LTR MaLR 0 364 1 292 128 0 0 chr10 46205558 46205597 -99383691 - MER94 DNA DNA -95 39 1 1874 192 116 134 chr10 46205637 46206831 -99382457 - L1MC5 LINE L1 -178 7783 6611 1120 238 12 25 chr10 46207484 46207803 -99381485 + L1MB1 LINE L1 3935 4249 -1897 234 0 0 0 chr10 46208287 46208313 -99380975 + (TG)n Simple_repeat Simple_repeat 2 27 0 195 42 0 0 chr10 46208360 46208384 -99380904 + (GGGA)n Simple_repeat Simple_repeat 4 27 0 276 77 0 0 chr10 46210151 46210190 -99379098 + (CA)n Simple_repeat Simple_repeat 1 39 0 2848 13 0 0 chr10 46211670 46211976 -99377312 - AluYb8 SINE Alu -12 306 1 942 243 219 18 chr10 46212146 46212887 -99376401 + L2 LINE L2 2436 3313 0 21373 124 25 16 chr10 46213000 46216756 -99372532 + L1MDa LINE L1 17 4211 -2329 2183 209 46 40 chr10 46216753 46217233 -99372055 + L1MD2 LINE L1 1311 1798 -4742 * 2293 85 7 0 chr10 46217233 46217527 -99371761 - AluY SINE Alu -15 296 1 2183 209 46 40 chr10 46217527 46217693 -99371595 + L1MD2 LINE L1 1798 1961 -4579 * 6367 230 108 28 chr10 46217673 46218042 -99371246 + L1MD2 LINE L1 3288 3626 -2989 1442 178 4 0 chr10 46218042 46218273 -99371015 - MER46A DNA MER2_type -2 234 3 6367 230 108 28 chr10 46218273 46218538 -99370750 + L1MD2 LINE L1 3626 3868 -2747 2563 119 112 5 chr10 46218538 46218923 -99370365 + MSTA LTR MaLR 1 426 -2 6367 230 108 28 chr10 46218923 46220672 -99368616 + L1MD2 LINE L1 3868 5872 -743 5310 173 26 8 chr10 46220669 46221984 -99367304 + L1MB1 LINE L1 4826 6167 -1 * 2461 194 75 96 chr10 46221973 46222734 -99366554 + L1MD2 LINE L1 5862 6606 -30 * 3146 141 19 19 chr10 46223640 46224159 -99365129 - L1MB3 LINE L1 -7 6176 5658 1443 219 123 15 chr10 46225650 46226056 -99363232 + L1M4 LINE L1 3726 4175 -1971 651 234 38 53 chr10 46226190 46226399 -99362889 + MIR SINE MIR 57 262 0 452 309 64 35 chr10 46227932 46228356 -99360932 + MLT1H LTR MaLR 111 546 -3 763 231 16 11 chr10 46228630 46228816 -99360472 + MER5A DNA MER1_type 3 189 0 189 0 0 0 chr10 46229330 46229351 -99359937 + (GGGGA)n Simple_repeat Simple_repeat 2 22 0 1423 296 70 8 chr10 46230555 46231169 -99358119 - L1ME3 LINE L1 -91 6071 5420 599 190 0 53 chr10 46231156 46231285 -99358003 - FLAM_C SINE Alu -20 123 14 * 229 61 85 5 chr10 46231285 46231327 -99357961 - L1P LINE L1 -725 5429 5386 201 94 0 0 chr10 46232030 46232062 -99357226 + (T)n Simple_repeat Simple_repeat 1 32 0 200 256 137 8 chr10 46232713 46232830 -99356458 + L2 LINE L2 2719 2850 -464 259 342 71 26 chr10 46233000 46233155 -99356133 + L2 LINE L2 3102 3263 -9 225 159 0 0 chr10 46235381 46235425 -99353863 + (CA)n Simple_repeat Simple_repeat 1 44 0 223 245 0 0 chr10 46235869 46235918 -99353370 + (TCTG)n Simple_repeat Simple_repeat 3 51 0 934 163 12 0 chr10 46238142 46238308 -99350980 - L1MA10 LINE L1 -1 6333 6166 2018 136 0 0 chr10 46238314 46238615 -99350673 - AluSx SINE Alu -11 301 1 2571 142 23 16 chr10 46238620 46239063 -99350225 - L1PA16 LINE L1 0 6166 5721 2096 118 0 3 chr10 46240418 46240715 -99348573 - AluSg SINE Alu -14 296 1 916 156 57 80 chr10 46240715 46240927 -99348361 - MER20 DNA MER1_type -12 207 1 217 258 10 124 chr10 46242274 46242371 -99346917 + MIR SINE MIR 102 187 -75 1478 199 0 29 chr10 46243263 46243579 -99345709 + AluJo SINE Alu 1 307 -5 629 204 139 118 chr10 46243836 46244276 -99345012 - MLT2B2 LTR ERVL -6 509 10 713 305 72 26 chr10 46245597 46245945 -99343343 + L3 LINE CR1 1053 1416 -161 1734 158 27 18 chr10 46247893 46248229 -99341059 - L1MB3 LINE L1 -3 6180 5842 475 316 9 0 chr10 46251120 46251234 -99338054 + L2 LINE L2 3158 3272 0 821 125 0 28 chr10 46252148 46252292 -99336996 - FRAM SINE Alu -1 175 36 639 298 43 43 chr10 46252402 46252965 -99336323 - L1MEc LINE L1 -5227 1169 607 365 113 62 12 chr10 46253214 46253294 -99335994 - L1MA8 LINE L1 -4 6287 6204 331 338 58 14 chr10 46253305 46253512 -99335776 - L1MEc LINE L1 -6015 381 166 232 24 24 48 chr10 46254513 46254555 -99334733 + (TTA)n Simple_repeat Simple_repeat 3 43 0 8146 32 0 2 chr10 46254559 46256301 -99332987 - L1PA3 LINE L1 -20 6135 4398 354 287 100 56 chr10 46256307 46256558 -99332730 - L1M4 LINE L1 -1081 5134 4873 431 310 0 9 chr10 46257003 46257116 -99332172 - L2 LINE L2 0 3313 3202 545 244 31 34 chr10 46257148 46257359 -99331929 - MER63 DNA MER1_type 0 1061 1 291 356 7 34 chr10 46257443 46257589 -99331699 - L2 LINE L2 -171 3142 3001 15545 111 38 7 chr10 46258251 46260597 -99328691 + Tigger1 DNA MER2_type 1 2418 0 200 292 0 0 chr10 46261833 46261881 -99327407 + L2 LINE L2 3218 3265 -7 818 294 5 9 chr10 46265931 46266145 -99323143 - MIR SINE MIR -13 249 37 694 335 80 49 chr10 46266346 46267222 -99322066 - L1MEc LINE L1 -3433 2782 1898 980 309 93 39 chr10 46267575 46268520 -99320768 - L1MEc LINE L1 -4882 1323 328 227 273 91 58 chr10 46268646 46268767 -99320521 - MIR SINE MIR -118 144 20 367 224 164 48 chr10 46268928 46269093 -99320195 + MER5A DNA MER1_type 6 189 0 2129 171 26 8 chr10 46269485 46269865 -99319423 - MLT1B LTR MaLR -3 387 1 1245 182 9 0 chr10 46270549 46270780 -99318508 + MER46A DNA MER2_type 1 233 -3 1704 146 188 19 chr10 46271335 46271760 -99317528 + LTR54B LTR ERV1 1 497 -1 3627 223 56 32 chr10 46274237 46275813 -99313475 - L1ME2 LINE L1 -331 5833 4217 345 301 44 44 chr10 46276221 46276357 -99312931 - L2 LINE L2 0 3272 3137 186 305 0 17 chr10 46276543 46276602 -99312686 + L2 LINE L2 3232 3289 -24 248 242 45 0 chr10 46277200 46277266 -99312022 - MLT1K LTR MaLR -519 69 1 199 290 48 0 chr10 46277949 46278011 -99311277 + MIR SINE MIR 27 91 -117 205 319 21 43 chr10 46278079 46278173 -99311115 + MIR SINE MIR 20 111 -151 * 343 321 62 31 chr10 46278169 46278331 -99310957 + MER5A DNA MER1_type 22 188 -1 296 313 52 30 chr10 46278331 46278457 -99310831 + MIR SINE MIR 101 229 -33 202 324 54 27 chr10 46278513 46278624 -99310664 - L2 LINE L2 -40 3232 3119 200 159 0 23 chr10 46279714 46279758 -99309530 + GA-rich Low_complexity Low_complexity 1 43 0 550 270 64 15 chr10 46280217 46280412 -99308876 + MIR SINE MIR 22 236 -26 202 289 0 0 chr10 46280782 46280834 -99308454 + GA-rich Low_complexity Low_complexity 6 57 0 184 239 75 15 chr10 46280980 46281047 -99308241 + L2 LINE L2 2457 2527 -787 22 0 0 0 chr10 46281603 46281625 -99307663 + AT_rich Low_complexity Low_complexity 1 22 0 211 192 223 54 chr10 46284852 46284982 -99304306 + MIR SINE MIR 62 213 -49 252 0 0 0 chr10 46285470 46285498 -99303790 + (GA)n Simple_repeat Simple_repeat 1 28 0 209 296 0 56 chr10 46286462 46286533 -99302755 - L2 LINE L2 -1 3271 3205 183 346 122 13 chr10 46287155 46287311 -99301977 - L2 LINE L2 -386 2928 2756 29 0 0 0 chr10 46287400 46287429 -99301859 + AT_rich Low_complexity Low_complexity 1 29 0 217 299 41 21 chr10 46288729 46288826 -99300462 - L3 LINE CR1 -88 1489 1391 2029 139 0 0 chr10 46289344 46289688 -99299600 - AluSx SINE Alu 0 344 1 21 36 0 0 chr10 46290643 46290671 -99298617 + AT_rich Low_complexity Low_complexity 1 28 0 207 0 0 0 chr10 46290690 46290713 -99298575 + (TA)n Simple_repeat Simple_repeat 2 24 0 2225 106 3 0 chr10 46290804 46291115 -99298173 - AluSx SINE Alu 0 312 1 1912 128 21 0 chr10 46292795 46293084 -99296204 + AluSx SINE Alu 1 295 -17 2051 78 65 7 chr10 46293647 46293940 -99295348 - AluY SINE Alu -1 310 1 215 130 19 0 chr10 46295761 46295815 -99293473 + T-rich Low_complexity Low_complexity 5 59 0 1808 118 93 4 chr10 46296422 46296701 -99292587 - AluSq SINE Alu -9 304 1 2029 149 29 17 chr10 46297804 46298153 -99291135 - L1PB3 LINE L1 -2 6152 5800 340 295 60 66 chr10 46298552 46298767 -99290521 + MIR SINE MIR 8 218 -44 861 193 0 0 chr10 46299028 46299314 -99289974 + (ATG)n Simple_repeat Simple_repeat 1 286 0 478 314 145 64 chr10 46299385 46300455 -99288833 + L1MB3 LINE L1 4257 5469 -777 27591 51 1 6 chr10 46300659 46304072 -99285216 + L1P LINE L1 8 3406 -2740 219 125 0 0 chr10 46304452 46304492 -99284796 + (TAAAAA)n Simple_repeat Simple_repeat 2 41 0 234 141 62 0 chr10 46304536 46304600 -99284688 + L1M4 LINE L1 5122 5189 -957 194 351 50 45 chr10 46304679 46304881 -99284407 + L2 LINE L2 2830 3032 -240 467 241 151 72 chr10 46306863 46307154 -99282134 - MER33 DNA MER1_type -2 322 9 245 299 72 43 chr10 46307154 46307361 -99281927 - L2 LINE L2 -209 3063 2851 1281 221 75 31 chr10 46307848 46308058 -99281230 - MLT1A2 LTR MaLR 0 374 139 1973 102 7 14 chr10 46308058 46308370 -99280918 - AluSx SINE Alu 0 310 1 1281 221 75 31 chr10 46308370 46308516 -99280772 - MLT1A2 LTR MaLR -235 139 1 183 243 135 0 chr10 46309063 46309137 -99280151 - MER5A DNA MER1_type -94 95 12 3580 165 36 35 chr10 46309148 46309863 -99279425 - LTR62 LTR ERVK -2 717 2 253 259 12 25 chr10 46309898 46309979 -99279309 + L3 LINE CR1 1425 1504 -73 283 279 87 6 chr10 46310168 46310351 -99278937 + LTR16B LTR ERVL 1 198 -266 3947 177 9 11 chr10 46311555 46312300 -99276988 + L1MB3 LINE L1 5440 6183 0 236 180 16 49 chr10 46312904 46312965 -99276323 + MIR SINE MIR 71 130 -78 24 0 0 0 chr10 46313649 46313673 -99275615 + AT_rich Low_complexity Low_complexity 1 24 0 1125 124 5 67 chr10 46313680 46313890 -99275398 + Tigger4(Zombi) DNA MER2_type 2530 2726 -5 893 221 214 50 chr10 46313888 46314290 -99274998 - MLT1D LTR MaLR -37 468 1 * 26 30 0 0 chr10 46314331 46314364 -99274924 + AT_rich Low_complexity Low_complexity 1 33 0 1782 132 66 39 chr10 46314674 46315008 -99274280 + MER61A LTR ERV1 1 343 0 1460 160 99 13 chr10 46315160 46315472 -99273816 - MER44D DNA MER2_type 0 609 1 2621 163 84 32 chr10 46317106 46317665 -99271623 + L1MB3 LINE L1 5593 6180 -3 1018 291 10 10 chr10 46317669 46317964 -99271324 + L1MDa LINE L1 108 402 -6138 1262 207 86 3 chr10 46318027 46318317 -99270971 - MLT1C LTR MaLR -153 314 1 609 232 52 0 chr10 46318317 46318472 -99270816 + L1MD2 LINE L1 6196 6358 -1 1681 181 103 134 chr10 46319254 46319924 -99269364 - MLT1E1 LTR MaLR 0 654 6 2145 106 6 13 chr10 46320727 46321039 -99268249 + AluSg SINE Alu 1 310 0 1997 166 78 10 chr10 46321883 46322281 -99267007 + MSTB LTR MaLR 1 425 -1 1859 186 63 3 chr10 46322286 46322652 -99266636 - MLT1B LTR MaLR 0 390 3 472 241 82 60 chr10 46323907 46324139 -99265149 - MLT2F LTR ERVL -25 638 402 209 301 27 0 chr10 46325083 46325156 -99264132 + CT-rich Low_complexity Low_complexity 4 78 0 1684 220 38 19 chr10 46325946 46326499 -99262789 + L1MDa LINE L1 2497 3021 -3519 236 213 110 71 chr10 46326633 46326760 -99262528 + MIR SINE MIR 76 207 -55 418 285 154 24 chr10 46326903 46327201 -99262087 + LTR33A LTR ERVL 60 396 -127 188 206 159 32 chr10 46328312 46328375 -99260913 + L2 LINE L2 353 423 -2891 200 348 35 9 chr10 46331690 46331805 -99257483 - MIR SINE MIR -117 145 28 207 176 0 0 chr10 46332687 46332721 -99256567 + (CA)n Simple_repeat Simple_repeat 1 34 0 371 292 18 9 chr10 46334321 46334434 -99254854 + MER94 DNA DNA 20 133 -1 260 295 107 40 chr10 46335196 46335345 -99253943 + L2 LINE L2 3112 3270 -2 344 236 95 27 chr10 46336313 46336461 -99252827 + MIR SINE MIR 17 174 -88 1667 203 91 19 chr10 46336912 46337341 -99251947 + MLT1C LTR MaLR 1 460 -7 330 232 12 12 chr10 46337660 46337742 -99251546 - L2 LINE L2 -10 3262 3181 974 168 10 51 chr10 46338255 46338451 -99250837 + MER5A DNA MER1_type 2 189 0 4181 221 82 40 chr10 46339628 46340814 -99248474 + L1M4b LINE L1 30 1264 -5595 1016 282 80 16 chr10 46340806 46341296 -99247992 + L1M4b LINE L1 2012 2532 -4427 * 8372 214 52 69 chr10 46341362 46342784 -99246504 + L1M4b LINE L1 2474 3919 -3038 252 111 0 0 chr10 46342784 46342820 -99246468 + tRNA-Glu-GAG tRNA tRNA 1 36 -39 8372 214 52 69 chr10 46342820 46343196 -99246092 + L1M4b LINE L1 3919 4300 -2657 2498 158 27 2 chr10 46343196 46343640 -99245648 + L1PA16 LINE L1 5711 6165 -1 8372 214 52 69 chr10 46343640 46344348 -99244940 + L1M4b LINE L1 4300 5019 -1938 252 0 0 0 chr10 46344348 46344376 -99244912 + (GGAA)n Simple_repeat Simple_repeat 3 30 0 8372 214 52 69 chr10 46344376 46345439 -99243849 + L1M4b LINE L1 5019 5987 -970 1067 172 50 18 chr10 46345979 46346200 -99243088 - AluJb SINE Alu -1 311 84 1808 152 13 7 chr10 46347149 46347459 -99241829 + AluJo SINE Alu 1 312 0 933 101 8 0 chr10 46348000 46348129 -99241159 + AluSq/x SINE Alu 3 132 -181 644 138 9 18 chr10 46348616 46348725 -99240563 - FLAM_C SINE Alu 0 143 36 1755 144 7 14 chr10 46348977 46349269 -99240019 - AluJb SINE Alu -22 290 1 2546 10 0 3 chr10 46349295 46349583 -99239705 + AluYb8 SINE Alu 21 307 -11 1876 111 13 60 chr10 46349597 46349912 -99239376 + AluSx SINE Alu 6 305 -7 513 179 241 0 chr10 46351373 46351485 -99237803 + FLAM_C SINE Alu 2 140 -3 193 309 74 12 chr10 46351535 46351616 -99237672 - L2 LINE L2 0 3313 3228 590 228 78 68 chr10 46352682 46352888 -99236400 - MLT1L LTR MaLR -55 560 353 550 231 73 29 chr10 46353862 46354061 -99235227 - MIR SINE MIR -49 213 6 214 260 21 62 chr10 46354140 46354236 -99235052 - MIR3 SINE MIR -2 206 115 251 337 11 15 chr10 46354336 46354445 -99234843 + MIR SINE MIR 47 139 -69 2115 110 0 3 chr10 46354743 46355042 -99234246 + AluSx SINE Alu 1 298 -14 313 322 99 20 chr10 46355194 46355346 -99233942 - MIR SINE MIR -17 245 82 401 326 6 55 chr10 46355821 46356002 -99233286 - MER5A DNA MER1_type 0 189 7 2207 75 3 38 chr10 46356062 46356381 -99232907 - AluY SINE Alu -3 308 1 767 183 0 0 chr10 46356531 46356651 -99232637 + FLAM_C SINE Alu 2 121 -12 27 0 0 0 chr10 46356651 46356678 -99232610 + AT_rich Low_complexity Low_complexity 1 27 0 1909 112 3 7 chr10 46356680 46357012 -99232276 - AluSp SINE Alu 0 331 1 2010 112 3 0 chr10 46357268 46357554 -99231734 - AluSx SINE Alu -3 309 23 23 0 0 0 chr10 46357570 46357593 -99231695 + AT_rich Low_complexity Low_complexity 1 23 0 744 193 33 0 chr10 46357597 46357747 -99231541 - L1ME LINE L1 -452 5714 5560 258 258 45 0 chr10 46357901 46357967 -99231321 + L3 LINE CR1 1503 1571 -6 2077 93 7 0 chr10 46358228 46358533 -99230755 - AluSc SINE Alu 0 307 1 276 309 0 32 chr10 46358593 46358687 -99230601 + MIR SINE MIR 16 106 -102 2278 222 78 23 chr10 46358690 46358938 -99230350 + Charlie1a DNA MER1_type 1 234 -2527 1823 89 53 0 chr10 46358938 46359185 -99230103 - AluSq SINE Alu -53 260 1 2278 222 78 23 chr10 46359185 46359535 -99229753 + Charlie1a DNA MER1_type 234 632 -823 1408 148 133 7 chr10 46359537 46359807 -99229481 + AluJb SINE Alu 9 312 0 1082 185 9 9 chr10 46359811 46360027 -99229261 + Charlie1a DNA MER1_type 627 842 -613 2270 85 7 0 chr10 46360925 46361220 -99228068 - AluY SINE Alu -12 299 3 670 184 108 19 chr10 46361292 46361450 -99227838 + MIR SINE MIR 91 262 0 679 142 44 0 chr10 46361532 46361645 -99227643 - FRAM SINE Alu -19 157 40 1483 180 0 7 chr10 46362606 46362878 -99226410 + AluJo SINE Alu 24 293 -19 288 266 23 117 chr10 46364411 46364539 -99224749 - LTR16B LTR ERVL -247 217 102 30 0 0 0 chr10 46366140 46366170 -99223118 + AT_rich Low_complexity Low_complexity 1 30 0 545 269 56 41 chr10 46368190 46368387 -99220901 - MIR SINE MIR -50 212 13 405 151 0 0 chr10 46368895 46368968 -99220320 - AluS SINE Alu -8 304 232 7875 102 19 7 chr10 46371189 46372277 -99217011 + THE1-int LTR MaLR 159 1259 -321 245 373 35 10 chr10 46372529 46372730 -99216558 - MIR SINE MIR -4 258 53 1214 108 0 16 chr10 46373617 46373803 -99215485 + HERVH48 LTR ERV1 6472 6654 0 2633 98 30 52 chr10 46373803 46374210 -99215078 + MER48 LTR ERV1 1 398 0 1239 196 48 94 chr10 46374221 46374613 -99214675 + MLT1B LTR MaLR 1 374 -16 1182 0 0 0 chr10 46374765 46374896 -99214392 + L1PA2 LINE L1 6025 6155 0 2059 137 0 3 chr10 46375020 46375333 -99213955 + AluSx SINE Alu 1 312 0 1244 252 42 18 chr10 46375409 46375790 -99213498 - L1MA9 LINE L1 -38 6274 5885 854 171 0 32 chr10 46375790 46375948 -99213340 - FAM SINE Alu 0 49 1 5148 163 16 4 chr10 46376049 46376882 -99212406 - HERVH48 LTR ERV1 -5811 843 1 2404 118 45 52 chr10 46376884 46377284 -99212004 - MER48 LTR ERV1 -1 397 1 257 272 149 9 chr10 46377346 46377460 -99211828 + HAL1 LINE L1 634 763 -1744 382 156 0 26 chr10 46377477 46377554 -99211734 - MER57A LTR ERV1 0 403 329 1073 313 35 7 chr10 46377742 46378145 -99211143 - L1PA12 LINE L1 -7166 415 2 1745 198 9 0 chr10 46378188 46378506 -99210782 + Tigger1 DNA MER2_type 20 340 -2078 * 1875 104 27 0 chr10 46378504 46378763 -99210525 - LTR9B LTR ERV1 -378 266 1 242 347 28 14 chr10 46380440 46380584 -99208704 - MIR3 SINE MIR -30 178 33 358 230 23 58 chr10 46380953 46381012 -99208276 + AluSg/x SINE Alu 120 177 -125 4683 66 7 0 chr10 46381012 46381599 -99207689 + LTR10C LTR ERV1 1 591 0 358 230 23 58 chr10 46381599 46381626 -99207662 + AluSg/x SINE Alu 177 203 -99 1931 157 3 0 chr10 46384110 46384396 -99204892 - AluSx SINE Alu -23 289 3 22 0 0 0 chr10 46384523 46384545 -99204743 + AT_rich Low_complexity Low_complexity 1 22 0 21 89 0 0 chr10 46384624 46384680 -99204608 + AT_rich Low_complexity Low_complexity 1 56 0 272 61 0 0 chr10 46384820 46384886 -99204402 - AluSp/q SINE Alu 0 316 251 22226 68 2 8 chr10 46384986 46388063 -99201225 + L1P3 LINE L1 2444 5499 -655 3640 137 63 19 chr10 46388183 46388831 -99200457 - L1MA8 LINE L1 -3 6288 5609 1864 134 50 7 chr10 46388831 46389114 -99200174 - AluSg SINE Alu -13 297 3 3640 137 63 19 chr10 46389114 46389136 -99200152 - L1MA8 LINE L1 -682 5609 5589 3139 126 15 11 chr10 46389284 46389816 -99199472 - L1M1 LINE L1 -4713 2852 2319 7768 29 0 1 chr10 46389857 46391460 -99197828 - L1PA3 LINE L1 0 6155 4556 3464 190 60 65 chr10 46391568 46392496 -99196792 + L1MB8 LINE L1 5254 6177 -1 283 303 130 10 chr10 46392517 46392817 -99196471 - L1MEd LINE L1 -5234 885 550 36 23 0 0 chr10 46393022 46393065 -99196223 + AT_rich Low_complexity Low_complexity 1 43 0 522 156 0 0 chr10 46393065 46393155 -99196133 - L1PA16 LINE L1 -9 6157 6068 225 363 140 0 chr10 46393288 46393445 -99195843 + MIR SINE MIR 50 228 -34 336 24 0 0 chr10 46394749 46394790 -99194498 + (CA)n Simple_repeat Simple_repeat 1 41 0 222 319 0 0 chr10 46394984 46395056 -99194232 - MIR3 SINE MIR -43 165 94 204 232 89 0 chr10 46395514 46395570 -99193718 + L3b LINE CR1 1276 1336 -247 292 353 0 0 chr10 46396290 46396457 -99192831 + C-rich Low_complexity Low_complexity 1 167 0 * 343 260 34 34 chr10 46396389 46396566 -99192722 + (CCCA)n Simple_repeat Simple_repeat 1 177 0 231 353 32 58 chr10 46397945 46398288 -99191000 + L2 LINE L2 2920 3253 -19 274 96 19 19 chr10 46399409 46399461 -99189827 + (CA)n Simple_repeat Simple_repeat 2 53 0 503 247 70 13 chr10 46400613 46400771 -99188517 + LTR41 LTR ERVL 10 176 -597 391 196 12 102 chr10 46401049 46401108 -99188180 + LTR41 LTR ERVL 650 713 -82 1919 144 7 3 chr10 46401108 46401399 -99187889 - AluSq SINE Alu -20 293 2 391 196 12 102 chr10 46401399 46401476 -99187812 + LTR41 LTR ERVL 713 795 0 21 36 0 0 chr10 46401978 46402006 -99187282 + AT_rich Low_complexity Low_complexity 1 28 0 358 300 15 70 chr10 46402047 46402317 -99186971 - L1M4 LINE L1 -3119 3027 2773 1815 140 15 0 chr10 46403191 46403280 -99186008 + AluSx SINE Alu 36 122 -190 207 0 0 0 chr10 46403280 46403303 -99185985 + (CA)n Simple_repeat Simple_repeat 2 24 0 1815 140 15 0 chr10 46403303 46403477 -99185811 + AluSx SINE Alu 122 303 -9 3723 244 42 54 chr10 46403629 46404164 -99185124 - L1M4 LINE L1 -1889 4257 3717 1771 175 62 22 chr10 46404164 46404535 -99184753 + MLT1B LTR MaLR 5 390 0 3723 244 42 54 chr10 46404535 46404963 -99184325 - L1M4 LINE L1 -2429 3717 3286 231 139 0 0 chr10 46404963 46404999 -99184289 - U2 snRNA snRNA -152 36 1 3723 244 42 54 chr10 46404999 46405530 -99183758 - L1M4 LINE L1 -2860 3286 2745 403 148 123 37 chr10 46405536 46405617 -99183671 + MLT1B LTR MaLR 1 88 -302 308 271 25 42 chr10 46405617 46405735 -99183553 - LTR28 LTR ERV1 0 1020 905 734 187 29 38 chr10 46405817 46405995 -99183293 - LTR1B LTR ERV1 -328 498 343 445 243 69 34 chr10 46406055 46406230 -99183058 - LTR1B LTR ERV1 -559 226 42 1438 253 49 24 chr10 46406258 46406767 -99182521 - L1M4 LINE L1 -3404 2742 2221 462 141 0 0 chr10 46406779 46406850 -99182438 - AluJ/FRAM SINE Alu -9 303 233 277 283 0 33 chr10 46406850 46406942 -99182346 - AluY SINE Alu -106 195 107 273 191 15 15 chr10 46406947 46407015 -99182273 - L1M4 LINE L1 -3951 2195 2128 4319 175 48 20 chr10 46407016 46408059 -99181229 + L1MB3 LINE L1 5108 6180 -3 284 219 82 0 chr10 46408427 46408500 -99180788 - L2 LINE L2 0 3313 3235 763 204 0 0 chr10 46410374 46410506 -99178782 - MER45A DNA AcHobo 0 178 47 312 307 61 9 chr10 46411372 46411486 -99177802 - MIR SINE MIR -85 177 58 698 220 58 14 chr10 46411495 46411754 -99177534 + MER34 LTR ERV1 1 351 -416 437 252 83 78 chr10 46411726 46412030 -99177258 + LTR48B LTR ERV1 390 780 -7 * 375 239 33 0 chr10 46412171 46412263 -99177025 - MIR SINE MIR -67 195 101 818 224 106 86 chr10 46414069 46414417 -99174871 + MLT1A1 LTR MaLR 10 364 -1 198 239 65 0 chr10 46415503 46415549 -99173739 - L2 LINE L2 -86 3186 3138 257 313 69 7 chr10 46415559 46415703 -99173585 + L1ME3 LINE L1 5894 6046 -116 255 212 131 40 chr10 46416503 46416602 -99172686 - MER94 DNA DNA -26 108 1 1882 177 18 18 chr10 46416794 46417179 -99172109 - MLT1B LTR MaLR 0 390 6 304 209 174 12 chr10 46418282 46418368 -99170920 + MLT1A1 LTR MaLR 2 101 -264 208 346 125 0 chr10 46418371 46418475 -99170813 - MIR SINE MIR -110 152 36 439 300 57 0 chr10 46418482 46418622 -99170666 + MER58A DNA MER1_type 1 148 0 2186 106 3 0 chr10 46418713 46418996 -99170292 + AluSg SINE Alu 17 300 -10 39322 76 15 6 chr10 46419009 46425100 -99164188 + L1PA6 LINE L1 11 6154 0 185 265 111 17 chr10 46426043 46426160 -99163128 + MIR SINE MIR 82 209 -53 266 333 47 8 chr10 46426271 46426400 -99162888 - L2 LINE L2 0 3313 3180 238 260 34 136 chr10 46426536 46426562 -99162726 - MIR SINE MIR -73 189 162 1548 219 35 14 chr10 46426562 46426928 -99162360 - MLT1A2 LTR MaLR 0 374 1 238 260 34 136 chr10 46426928 46427078 -99162210 - MIR SINE MIR -100 162 31 1354 223 56 13 chr10 46427705 46428010 -99161278 + MLT1A2 LTR MaLR 1 318 -56 768 313 39 14 chr10 46428493 46428851 -99160437 - L3 LINE CR1 -694 883 517 549 0 0 0 chr10 46429192 46429253 -99160035 + (TG)n Simple_repeat Simple_repeat 2 62 0 21 0 0 0 chr10 46429948 46429969 -99159319 + AT_rich Low_complexity Low_complexity 1 21 0 989 214 0 0 chr10 46431459 46431632 -99157656 + FRAM SINE Alu 1 164 -12 337 195 8 13 chr10 46432131 46432243 -99157045 + MER53 DNA DNA 23 189 0 312 351 111 0 chr10 46432436 46432644 -99156644 - HAL1 LINE L1 -1173 1334 1104 327 130 0 0 chr10 46434403 46434457 -99154831 + (TG)n Simple_repeat Simple_repeat 2 55 0 809 250 9 79 chr10 46434511 46434827 -99154461 - MER33 DNA MER1_type -1 323 30 422 305 46 28 chr10 46436553 46436754 -99152534 + MIR SINE MIR 16 218 -44 395 297 29 14 chr10 46438000 46438138 -99151150 - MIR SINE MIR -49 213 74 234 0 0 0 chr10 46439881 46439907 -99149381 + (A)n Simple_repeat Simple_repeat 1 26 0 221 245 79 86 chr10 46439931 46440070 -99149218 - MIR SINE MIR 0 262 125 607 317 69 13 chr10 46440237 46440540 -99148748 + ERVL LTR ERVL 2885 3204 -2560 272 349 67 30 chr10 46442103 46442372 -99146916 + LTR16C LTR ERVL 201 479 -12 1413 228 16 11 chr10 46442384 46442838 -99146450 + MLT2B1 LTR ERVL 9 510 -5 347 344 99 56 chr10 46442896 46443305 -99145983 + L2 LINE L2 711 1166 -2148 2829 58 23 0 chr10 46443305 46443649 -99145639 - THE1A LTR MaLR -3 352 1 347 344 99 56 chr10 46443649 46443955 -99145333 + L2 LINE L2 1166 1457 -1857 3805 180 89 19 chr10 46444121 46444926 -99144362 - MER21B LTR ERV1 -1 862 1 274 303 233 14 chr10 46445069 46445416 -99143872 + L2 LINE L2 2227 2649 -665 2095 145 46 76 chr10 46445424 46445977 -99143311 + MLT2A2 LTR ERVL 1 554 0 2280 135 56 44 chr10 46447941 46448370 -99140918 - L1PA16 LINE L1 -8 6158 5725 1131 198 0 45 chr10 46448708 46448955 -99140333 + MER8 DNA MER2_type 1 236 -3 307 262 0 24 chr10 46449004 46449088 -99140200 + GA-rich Low_complexity Low_complexity 3 84 0 318 245 73 119 chr10 46449137 46449398 -99139890 + L1M4 LINE L1 3102 3350 -2796 2181 199 61 27 chr10 46449627 46450249 -99139039 + L1M4 LINE L1 2445 3087 -3059 225 114 71 29 chr10 46450243 46450313 -99138975 + L1MA8 LINE L1 6219 6291 0 * 599 250 13 13 chr10 46450355 46450583 -99138705 + L1M4 LINE L1 3095 3322 -2824 537 250 175 0 chr10 46451135 46451295 -99137993 + MER91B DNA MER1_type 2 189 -1 298 248 9 9 chr10 46451338 46451443 -99137845 + GA-rich Low_complexity Low_complexity 3 107 0 257 315 24 24 chr10 46451457 46451584 -99137704 + L1MC/D LINE L1 5771 5897 -1911 5268 174 19 23 chr10 46451767 46453495 -99135793 - L1MA9 LINE L1 -36 6276 4553 32 26 0 0 chr10 46455802 46455841 -99133447 + AT_rich Low_complexity Low_complexity 1 39 0 21 0 0 0 chr10 46455991 46456012 -99133276 + AT_rich Low_complexity Low_complexity 1 21 0 306 278 21 0 chr10 46456047 46456144 -99133144 - L1MC/D LINE L1 -2016 5792 5694 229 278 145 40 chr10 46457042 46457290 -99131998 - L1ME4a LINE L1 -32 6089 5816 236 324 9 38 chr10 46457730 46457835 -99131453 - MER94 DNA DNA -26 108 7 279 316 43 7 chr10 46459297 46459436 -99129852 - MIR SINE MIR -55 207 64 255 195 0 65 chr10 46461814 46461891 -99127397 + GA-rich Low_complexity Low_complexity 1 72 0 2337 72 0 0 chr10 46462185 46462478 -99126810 + AluSc SINE Alu 1 293 -16 2129 129 0 0 chr10 46463971 46464282 -99125006 - AluSq SINE Alu -2 311 1 350 260 118 91 chr10 46465048 46465479 -99123809 + L2 LINE L2 2521 2963 -351 192 290 97 0 chr10 46465491 46465553 -99123735 - L2 LINE L2 -2760 554 487 180 325 92 0 chr10 46465768 46465888 -99123400 - L3 LINE CR1 -298 1279 1149 214 343 121 24 chr10 46466680 46466846 -99122442 + MIR3 SINE MIR 13 194 -14 195 42 0 0 chr10 46467986 46468010 -99121278 + (A)n Simple_repeat Simple_repeat 1 24 0 360 0 0 0 chr10 46469168 46469208 -99120080 + (TG)n Simple_repeat Simple_repeat 2 41 0 550 267 33 0 chr10 46469456 46469606 -99119682 + MER5B DNA MER1_type 18 172 -6 279 322 158 7 chr10 46469717 46469869 -99119419 - MER5B DNA MER1_type 0 178 4 213 154 0 0 chr10 46472491 46472530 -99116758 + C-rich Low_complexity Low_complexity 5 43 0 216 338 43 22 chr10 46472530 46472669 -99116619 - L2 LINE L2 -210 3062 2921 193 274 83 0 chr10 46473369 46473453 -99115835 - L2 LINE L2 -1265 2049 1959 774 118 199 16 chr10 46474530 46474716 -99114572 - L1MA9 LINE L1 -1 6311 6092 246 293 17 14 chr10 46475293 46475415 -99113873 - MIR SINE MIR -83 125 3 183 80 0 0 chr10 46476067 46476092 -99113196 + (ATG)n Simple_repeat Simple_repeat 2 26 0 405 243 42 130 chr10 46476531 46476815 -99112473 + L2 LINE L2 3055 3313 0 199 291 18 0 chr10 46477269 46477324 -99111964 - MIR3 SINE MIR -10 198 143 238 340 48 19 chr10 46477472 46477575 -99111713 - MIR SINE MIR -149 113 8 611 236 112 40 chr10 46477728 46478024 -99111264 + L1MC5 LINE L1 7260 7576 -385 2343 144 0 0 chr10 46478112 46478474 -99110814 - L1PB4 LINE L1 0 6156 5795 180 0 0 0 chr10 46478476 46478496 -99110792 + (TG)n Simple_repeat Simple_repeat 2 21 0 235 216 48 32 chr10 46478498 46478623 -99110665 + (TA)n Simple_repeat Simple_repeat 2 128 0 467 294 5 27 chr10 46478633 46478820 -99110468 + L1MC5 LINE L1 7731 7913 -48 28 61 0 0 chr10 46479143 46479192 -99110096 + AT_rich Low_complexity Low_complexity 1 49 0 2650 19 3 3 chr10 46480323 46480634 -99108654 + AluY SINE Alu 1 311 0 2363 88 0 0 chr10 46480648 46480956 -99108332 + AluSq SINE Alu 1 308 -5 655 126 29 0 chr10 46481017 46481120 -99108168 + FLAM_C SINE Alu 1 106 -37 325 278 0 0 chr10 46481331 46481464 -99107824 - L1PB4 LINE L1 -229 5927 5795 180 0 0 0 chr10 46481466 46481486 -99107802 + (TG)n Simple_repeat Simple_repeat 2 21 0 235 216 48 32 chr10 46481488 46481613 -99107675 + (TA)n Simple_repeat Simple_repeat 2 128 0 483 294 5 27 chr10 46481623 46481810 -99107478 + L1MC5 LINE L1 7731 7913 -48 313 176 47 35 chr10 46482049 46482134 -99107154 + L1MEd LINE L1 818 903 -5216 233 193 53 0 chr10 46482169 46482226 -99107062 + L1P LINE L1 5290 5349 -797 204 308 0 0 chr10 46485318 46485409 -99103879 - MIR SINE MIR -27 235 145 1877 144 40 0 chr10 46485801 46486099 -99103189 - AluJo SINE Alu -2 310 1 408 131 222 0 chr10 46486127 46486226 -99103062 + MER53 DNA DNA 62 182 -7 * 415 156 52 0 chr10 46486165 46486242 -99103046 - MER53 DNA DNA -108 81 1 300 373 28 24 chr10 46487474 46487686 -99101602 + L3 LINE CR1 1293 1505 -72 2443 175 38 40 chr10 46487784 46488305 -99100983 - MLT2B1 LTR ERVL 0 520 1 213 321 52 0 chr10 46489666 46489800 -99099488 + L2 LINE L2 2287 2427 -887 1190 194 17 0 chr10 46490261 46490493 -99098795 - MER8 DNA MER2_type -3 236 1 2266 197 13 28 chr10 46490497 46490963 -99098325 - MLT2B2 LTR ERVL -56 459 1 576 309 69 34 chr10 46491110 46491459 -99097829 + L2 LINE L2 2947 3307 -6 3390 125 14 16 chr10 46491554 46492057 -99097231 + MER1A DNA MER1_type 23 524 -5 210 286 77 11 chr10 46492064 46492155 -99097133 - L2 LINE L2 -5 3308 3212 348 296 61 28 chr10 46492253 46492466 -99096822 + L1M4 LINE L1 2651 2870 -3276 581 323 75 26 chr10 46492489 46492997 -99096291 + L1M4 LINE L1 2932 3464 -2682 225 265 215 50 chr10 46493009 46493311 -99095977 - LTR67 LTR ERVL -204 353 2 383 285 94 28 chr10 46493900 46494188 -99095100 + L2 LINE L2 2827 3133 -180 645 167 0 0 chr10 46494281 46494407 -99094881 + (TGGA)n Simple_repeat Simple_repeat 4 129 0 1050 254 210 9 chr10 46494669 46495121 -99094167 + MLT1H1 LTR MaLR 1 543 -12 264 254 202 1 chr10 46495175 46495276 -99094012 + MIR SINE MIR 2 121 -87 33 0 0 0 chr10 46497009 46497042 -99092246 + AT_rich Low_complexity Low_complexity 1 33 0 290 256 77 64 chr10 46497794 46497950 -99091338 + L2 LINE L2 3156 3313 0 208 301 10 19 chr10 46497970 46498073 -99091215 - L2 LINE L2 -33 3280 3179 268 301 97 0 chr10 46499485 46499598 -99089690 - L1ME3A LINE L1 -100 6070 5947 214 239 0 45 chr10 46499744 46499811 -99089477 + MIR SINE MIR 84 147 -61 255 265 20 6 chr10 46499903 46499997 -99089291 + CT-rich Low_complexity Low_complexity 1 95 0 1986 130 7 3 chr10 46501390 46501674 -99087614 + AluSx SINE Alu 1 285 -27 459 0 0 0 chr10 46501674 46501725 -99087563 + (GA)n Simple_repeat Simple_repeat 2 52 0 775 184 12 22 chr10 46502301 46502483 -99086805 + MSTD LTR MaLR 1 188 -208 680 118 0 17 chr10 46502483 46502602 -99086686 + L1PA14 LINE L1 5967 6083 -78 401 164 0 0 chr10 46502945 46503018 -99086270 + L1PA14 LINE L1 6089 6161 0 938 182 14 64 chr10 46503029 46503249 -99086039 + MSTD LTR MaLR 188 396 0 7836 225 32 31 chr10 46503251 46504976 -99084312 + MSTD-int LTR MaLR 2 1728 -7 1456 200 108 14 chr10 46504985 46505345 -99083943 + MSTD LTR MaLR 3 396 0 225 178 0 0 chr10 46505709 46505754 -99083534 - LTR66 LTR ERVL -172 438 394 231 250 0 0 chr10 46505756 46505824 -99083464 + (TA)n Simple_repeat Simple_repeat 2 69 0 31038 117 14 17 chr10 46505890 46511692 -99077596 + L1P3 LINE L1 3 5814 -655 5694 145 33 13 chr10 46511812 46512461 -99076827 - L1MA8 LINE L1 -3 6288 5601 2126 99 46 7 chr10 46512461 46512745 -99076543 - AluSg SINE Alu -13 297 3 5694 145 33 13 chr10 46512745 46513305 -99075983 - L1MA8 LINE L1 -690 5601 5054 228 179 54 36 chr10 46513331 46513387 -99075901 - MER3 DNA MER1_type -6 203 147 297 166 0 0 chr10 46513387 46513454 -99075834 - L1M4 LINE L1 -1107 5039 4973 541 314 58 20 chr10 46513487 46513831 -99075457 - L1M4 LINE L1 -2550 3596 3240 811 235 60 0 chr10 46513947 46514130 -99075158 - MER58A DNA MER1_type -12 212 19 308 339 81 23 chr10 46514271 46514445 -99074843 - L1MEd LINE L1 -5933 186 3 251 158 0 35 chr10 46514471 46514528 -99074760 + CT-rich Low_complexity Low_complexity 4 58 0 1023 156 10 9 chr10 46515239 46515436 -99073852 + L1MB3 LINE L1 5930 6127 -57 231 174 58 43 chr10 46515601 46515670 -99073618 - MIR SINE MIR -13 249 180 2056 140 3 0 chr10 46518118 46518418 -99070870 + AluSx SINE Alu 1 301 -11 1937 142 55 19 chr10 46518745 46519070 -99070218 - MER1B DNA MER1_type 0 337 1 635 257 23 6 chr10 46519774 46519945 -99069343 - MIR SINE MIR -88 174 1 23 97 0 0 chr10 46522253 46522325 -99066963 + AT_rich Low_complexity Low_complexity 1 72 0 899 80 0 0 chr10 46523406 46523518 -99065770 - FLAM_C SINE Alu -31 112 1 336 48 0 0 chr10 46524537 46524579 -99064709 + (CA)n Simple_repeat Simple_repeat 2 43 0 1854 154 0 20 chr10 46524635 46524940 -99064348 + AluJb SINE Alu 1 299 -13 231 91 0 0 chr10 46525408 46525441 -99063847 - L2 LINE L2 -17 3296 3264 181 364 10 0 chr10 46525472 46525571 -99063717 - MIR SINE MIR -65 143 44 313 293 111 11 chr10 46526898 46527079 -99062209 - L1MC4a LINE L1 -1909 5899 5701 253 211 0 0 chr10 46528379 46528431 -99060857 + MER116 DNA Mariner 2 53 -27 345 294 22 15 chr10 46528847 46528983 -99060305 + (CATATA)n Simple_repeat Simple_repeat 4 140 0 369 300 71 43 chr10 46528999 46529302 -99059986 + L1ME3A LINE L1 5645 5949 -219 253 332 93 22 chr10 46529807 46530033 -99059255 - L1MC4a LINE L1 -1892 5916 5675 3172 66 0 8 chr10 46530075 46530468 -99058820 + MLT2A1 LTR ERVL 1 390 -54 711 76 0 0 chr10 46530465 46530557 -99058731 - MLT2A1 LTR ERVL -352 92 1 * 404 41 0 0 chr10 46530639 46530688 -99058600 + MLT2A1 LTR ERVL 396 444 0 276 295 73 43 chr10 46530877 46531111 -99058177 - HAL1b LINE L1 -916 432 192 352 281 36 31 chr10 46531649 46531850 -99057438 - L1MEc LINE L1 -4085 2455 2262 249 33 0 0 chr10 46532070 46532100 -99057188 + (CA)n Simple_repeat Simple_repeat 1 30 0 287 331 53 0 chr10 46533885 46534018 -99055270 + L1MC/D LINE L1 5672 5811 -1997 29 28 0 0 chr10 46534021 46534057 -99055231 + AT_rich Low_complexity Low_complexity 1 36 0 281 263 64 53 chr10 46534187 46534358 -99054930 + HAL1b LINE L1 1169 1341 -7 1136 227 25 49 chr10 46535585 46535975 -99053313 + MLT2B1 LTR ERVL 4 402 -12 1768 161 7 27 chr10 46535975 46536274 -99053014 + AluJo SINE Alu 1 293 -19 393 22 0 0 chr10 46536282 46536328 -99052960 + (CA)n Simple_repeat Simple_repeat 2 47 0 1136 227 25 49 chr10 46536328 46536360 -99052928 + MLT2B1 LTR ERVL 383 414 0 385 268 86 19 chr10 46536633 46536985 -99052303 - LTR16A LTR ERVL -6 444 23 22 35 0 0 chr10 46537095 46537124 -99052164 + AT_rich Low_complexity Low_complexity 1 29 0 272 329 37 19 chr10 46537589 46537750 -99051538 - L1M4 LINE L1 -1447 4699 4536 246 32 0 0 chr10 46538577 46538608 -99050680 + (TA)n Simple_repeat Simple_repeat 1 31 0 1382 189 166 0 chr10 46539597 46539910 -99049378 + MLT1A1 LTR MaLR 1 365 0 436 291 52 43 chr10 46539947 46540157 -99049131 - MIR SINE MIR 0 262 51 1226 277 51 20 chr10 46542011 46542405 -99046883 - MLT1I LTR MaLR -1 408 3 378 326 102 41 chr10 46542769 46543893 -99045395 + L2 LINE L2 2074 3270 -2 1401 249 127 74 chr10 46543968 46544694 -99044594 + L1MC5 LINE L1 5674 6360 -1601 249 57 0 0 chr10 46544694 46544729 -99044559 + (CA)n Simple_repeat Simple_repeat 2 36 0 1401 249 127 74 chr10 46544729 46544847 -99044441 + L1MC5 LINE L1 6360 6470 -1491 1660 142 12 50 chr10 46544847 46545170 -99044118 + AluJb SINE Alu 1 311 -1 1401 249 127 74 chr10 46545170 46545816 -99043472 + L1MC5 LINE L1 6470 7228 -733 958 240 125 29 chr10 46545946 46546434 -99042854 + L1MC5 LINE L1 7260 7794 -167 2180 99 20 16 chr10 46546530 46546833 -99042455 - AluSx SINE Alu -8 304 1 26 50 0 0 chr10 46546884 46546924 -99042364 + AT_rich Low_complexity Low_complexity 1 40 0 182 328 51 17 chr10 46547636 46547768 -99041520 + MIR SINE MIR 5 139 -69 2259 117 7 0 chr10 46547813 46548112 -99041176 + AluSq SINE Alu 1 301 -12 432 336 7 0 chr10 46548883 46549029 -99040259 - MIR SINE MIR -112 150 4 258 32 0 0 chr10 46549232 46549263 -99040025 + (TG)n Simple_repeat Simple_repeat 2 32 0 2372 61 41 0 chr10 46550932 46551225 -99038063 - AluY SINE Alu -6 305 1 361 293 5 48 chr10 46553203 46553391 -99035897 + (TGG)n Simple_repeat Simple_repeat 1 180 0 299 163 12 0 chr10 46555089 46555169 -99034119 + (TA)n Simple_repeat Simple_repeat 1 81 0 245 109 0 0 chr10 46555169 46555215 -99034073 + LTR66 LTR ERVL 394 439 -171 333 273 150 42 chr10 46556648 46556908 -99032380 - MLT1J LTR MaLR 0 511 224 229 238 63 16 chr10 46557083 46557146 -99032142 - MLT1L LTR MaLR -549 66 1 764 261 111 40 chr10 46557205 46557557 -99031731 + MLT1I LTR MaLR 33 409 0 312 200 0 0 chr10 46557935 46557995 -99031293 - L1MC4 LINE L1 -2 8040 7981 249 361 49 24 chr10 46558013 46558301 -99030987 + L2 LINE L2 2030 2324 -990 285 328 78 63 chr10 46558489 46558760 -99030528 + L2 LINE L2 2994 3268 -4 299 281 38 30 chr10 46559045 46559326 -99029962 - L2 LINE L2 -324 2989 2635 1785 183 7 0 chr10 46564676 46564971 -99024317 - AluJb SINE Alu -3 309 13 1175 254 118 17 chr10 46564986 46565454 -99023834 - L1MD3 LINE L1 0 7995 7481 192 262 202 0 chr10 46565754 46565838 -99023450 + L2 LINE L2 3171 3271 -1 * 252 291 48 10 chr10 46565825 46565928 -99023360 - L3 LINE CR1 -174 1403 1297 1561 170 130 70 chr10 46566036 46566266 -99023022 - L1MB2 LINE L1 -1 6170 5955 2292 100 13 0 chr10 46566266 46566565 -99022723 - AluSx SINE Alu -9 303 1 1561 170 130 70 chr10 46566565 46566788 -99022500 - L1MB2 LINE L1 -216 5955 5690 239 237 0 0 chr10 46567678 46567737 -99021551 - Charlie8 DNA MER1_type -2358 59 1 503 211 118 38 chr10 46568105 46568342 -99020946 - Charlie2 DNA MER1_type -3 2859 2604 2010 138 0 10 chr10 46568342 46568633 -99020655 + AluSx SINE Alu 1 288 -24 504 86 0 0 chr10 46568633 46568703 -99020585 + (TA)n Simple_repeat Simple_repeat 2 71 0 40897 42 2 0 chr10 46568805 46574510 -99014778 + L1PA4 LINE L1 438 6154 -1 1261 176 159 32 chr10 46574518 46574921 -99014367 - Charlie2 DNA MER1_type -499 2363 1910 340 306 61 68 chr10 46575903 46576237 -99013051 + L1 LINE L1 3089 3421 -2725 2139 186 3 6 chr10 46576237 46576603 -99012685 + MLT1A1 LTR MaLR 1 365 0 340 306 61 68 chr10 46576603 46576664 -99012624 + L1 LINE L1 3421 3481 -2665 2294 96 0 7 chr10 46576708 46577001 -99012287 + AluY SINE Alu 1 291 -20 2903 146 75 18 chr10 46577263 46577873 -99011415 + L1MDa LINE L1 1538 2182 -4358 2780 221 34 53 chr10 46577890 46578604 -99010684 + L1M4 LINE L1 5 704 -5838 2852 201 65 20 chr10 46578705 46579590 -99009698 + L1M4 LINE L1 954 1872 -4774 1318 80 0 8 chr10 46581292 46581564 -99007724 + (GAA)n Simple_repeat Simple_repeat 1 269 0 1895 128 0 0 chr10 46581650 46581907 -99007381 - AluSc SINE Alu -52 257 1 872 261 52 29 chr10 46582523 46583081 -99006207 + L1M4 LINE L1 1857 2590 -4235 1027 158 78 39 chr10 46583096 46583118 -99006170 + L1MDa LINE L1 2191 2211 -4329 1509 205 98 10 chr10 46583118 46583504 -99005784 + LTR52 LTR ERVL 1 420 -1 1027 158 78 39 chr10 46583504 46583765 -99005523 + L1MDa LINE L1 2211 2485 -4055 183 80 0 0 chr10 46583894 46583919 -99005369 + (GGA)n Simple_repeat Simple_repeat 3 27 0 3277 61 0 16 chr10 46584209 46584636 -99004652 - L1PA4 LINE L1 0 6155 5736 1693 54 0 0 chr10 46584636 46584839 -99004449 + L1PA4 LINE L1 5503 5705 -450 2508 295 71 81 chr10 46584966 46587127 -99002161 + L1MDa LINE L1 2505 4644 -1896 1005 167 23 37 chr10 46587149 46587364 -99001924 - MER74A LTR ERVL -346 212 1 434 310 153 11 chr10 46587378 46587659 -99001629 + L2 LINE L2 2988 3308 -5 192 269 19 0 chr10 46587672 46587724 -99001564 - MIR SINE MIR -140 122 70 815 227 0 5 chr10 46588073 46588258 -99001030 + MER53 DNA DNA 1 184 -5 298 260 40 10 chr10 46589360 46589460 -98999828 + MIR SINE MIR 91 193 -69 261 167 0 0 chr10 46589474 46589528 -98999760 + (TATATG)n Simple_repeat Simple_repeat 4 57 0 2088 119 3 3 chr10 46589975 46590268 -98999020 + AluSq SINE Alu 1 293 -20 428 221 184 29 chr10 46591015 46591287 -98998001 - L1MC4a LINE L1 -1636 6172 5859 2629 96 151 137 chr10 46591405 46592198 -98997090 - LTR12 LTR ERV1 -5 709 1 268 234 52 26 chr10 46592303 46592380 -98996908 - LTR50 LTR ERVL -7 788 710 436 247 80 0 chr10 46592797 46592947 -98996341 - LTR50 LTR ERVL -633 162 1 520 293 98 35 chr10 46593238 46593665 -98995623 - L1M4 LINE L1 -2607 3539 3086 3649 242 88 17 chr10 46594470 46595684 -98993604 - L1MC4a LINE L1 -784 5362 4063 1094 228 77 30 chr10 46595802 46596294 -98992994 - L1MC4a LINE L1 -2852 3294 2780 2809 116 56 13 chr10 46596306 46596756 -98992532 - L1PB3 LINE L1 -2 6152 5684 5569 172 33 6 chr10 46596756 46598644 -98990644 + L1PA16 LINE L1 4127 6062 -104 440 77 15 0 chr10 46598646 46598711 -98990577 + L1PA16 LINE L1 6100 6165 -1 1993 107 3 11 chr10 46598820 46599160 -98990128 - L1PB3 LINE L1 -451 5700 5328 822 236 24 4 chr10 46599163 46599645 -98989643 - L1MC4a LINE L1 -3362 2784 2256 679 272 45 4 chr10 46599647 46599890 -98989398 - L1M4 LINE L1 -3644 2502 2250 5090 193 17 16 chr10 46599935 46601269 -98988019 - L1MA9 LINE L1 -38 6274 4933 387 103 0 0 chr10 46601270 46601328 -98987960 - L1P LINE L1 -769 5385 5328 33 25 0 0 chr10 46602109 46602149 -98987139 + AT_rich Low_complexity Low_complexity 1 40 0 290 316 0 0 chr10 46602450 46602548 -98986740 - MIR SINE MIR -116 146 49 3524 145 9 35 chr10 46604248 46604898 -98984390 + L1MB3 LINE L1 5551 6183 0 748 305 66 37 chr10 46607033 46607291 -98981997 + L2 LINE L2 2126 2375 -939 2232 100 0 13 chr10 46607291 46607601 -98981687 + AluSc SINE Alu 1 306 -3 748 305 66 37 chr10 46607601 46607961 -98981327 + L2 LINE L2 2375 2762 -552 292 302 69 39 chr10 46608094 46608354 -98980934 + L2 LINE L2 2951 3225 -88 939 187 0 18 chr10 46608354 46608525 -98980763 - FAM SINE Alu -7 168 1 292 302 69 39 chr10 46608525 46608598 -98980690 + L2 LINE L2 3225 3294 -19 513 281 24 11 chr10 46609454 46609643 -98979645 - MIR SINE MIR -23 239 50 197 109 0 65 chr10 46609925 46609971 -98979317 + L2 LINE L2 3266 3308 -5 387 245 28 28 chr10 46610013 46610156 -98979132 + (TATATG)n Simple_repeat Simple_repeat 2 144 0 2336 139 31 0 chr10 46610757 46611110 -98978178 - THE1B LTR MaLR 0 364 1 720 194 16 0 chr10 46611246 46611370 -98977918 + FLAM_C SINE Alu 2 127 -16 25 0 0 0 chr10 46611370 46611395 -98977893 + AT_rich Low_complexity Low_complexity 1 25 0 426 292 153 43 chr10 46612288 46612819 -98976469 + L2 LINE L2 1606 2194 -1120 422 264 54 31 chr10 46612844 46612973 -98976315 + MLT1J2 LTR MaLR 12 143 -307 372 248 83 51 chr10 46613013 46613170 -98976118 + MLT1J2 LTR MaLR 289 450 0 536 319 131 27 chr10 46613174 46613836 -98975452 + L2 LINE L2 2211 2941 -373 540 316 21 11 chr10 46613901 46614091 -98975197 - MIR SINE MIR -48 214 23 985 288 32 0 chr10 46614600 46614878 -98974410 - MLT1H1 LTR MaLR 0 555 269 1158 198 51 26 chr10 46614878 46615151 -98974137 + L1ME1 LINE L1 5790 6069 -97 21 0 0 0 chr10 46615187 46615208 -98974080 + AT_rich Low_complexity Low_complexity 1 21 0 1365 205 82 31 chr10 46615314 46615670 -98973618 - MSTD LTR MaLR 0 396 23 632 281 168 54 chr10 46616102 46616512 -98972776 + LTR16A LTR ERVL 1 457 0 775 349 37 25 chr10 46616513 46616946 -98972342 + HERV16 LTR ERVL 2 439 -4557 1953 197 64 12 chr10 46617053 46617565 -98971723 - L1ME LINE L1 -489 5677 5144 1190 271 52 20 chr10 46617566 46618013 -98971275 + L2 LINE L2 2469 2929 -385 489 207 41 35 chr10 46618028 46618173 -98971115 - L1MB8 LINE L1 -15 6163 6018 23 33 0 0 chr10 46618567 46618597 -98970691 + AT_rich Low_complexity Low_complexity 1 30 0 2331 103 0 0 chr10 46618838 46619140 -98970148 - AluSx SINE Alu -10 302 1 4988 43 0 3 chr10 46619376 46619983 -98969305 - L1P LINE L1 -4048 2098 1494 258 256 26 0 chr10 46620284 46620362 -98968926 - MSTB1 LTR MaLR -2 430 351 1937 140 71 24 chr10 46620500 46620878 -98968410 - MSTB1 LTR MaLR -35 397 2 383 261 97 41 chr10 46620969 46621164 -98968124 + L2 LINE L2 3107 3312 -1 1485 211 141 141 chr10 46622037 46623324 -98965964 - L1MEc LINE L1 -4289 2107 820 906 256 43 4 chr10 46623313 46623571 -98965717 - L1MEc LINE L1 -6090 306 39 * 210 319 121 0 chr10 46623573 46623689 -98965599 + MIR SINE MIR 130 259 -3 330 279 78 16 chr10 46624261 46624390 -98964898 + MIR SINE MIR 92 228 -34 2238 80 0 58 chr10 46624651 46624964 -98964324 + AluSg SINE Alu 1 295 -15 1849 202 116 37 chr10 46626546 46627057 -98962231 - MER77 LTR ERV1 -4 601 51 209 375 19 0 chr10 46627784 46627888 -98961400 + A-rich Low_complexity Low_complexity 4 109 0 1342 231 132 38 chr10 46631075 46631654 -98957634 + MLT1E3 LTR MaLR 2 615 -9 450 266 0 0 chr10 46631814 46632540 -98956748 + (CA)n Simple_repeat Simple_repeat 1 726 0 1985 154 45 28 chr10 46633565 46633923 -98955365 - THE1B LTR MaLR 0 364 1 1715 138 11 4 chr10 46634120 46634396 -98954892 - AluSx SINE Alu -34 278 1 469 272 52 84 chr10 46634469 46634613 -98954675 + MIR SINE MIR 57 193 -69 3408 61 9 5 chr10 46634613 46635055 -98954233 + L1PA6 LINE L1 5711 6154 0 469 272 52 84 chr10 46635055 46635123 -98954165 + MIR SINE MIR 193 262 0 518 277 111 30 chr10 46636458 46636729 -98952559 + L1MC4a LINE L1 5291 5583 -2225 343 276 101 26 chr10 46636772 46637000 -98952288 + L1MC4a LINE L1 5687 5931 -1877 2087 205 13 4 chr10 46637161 46637630 -98951658 - L1 LINE L1 -1422 4724 4252 1443 235 62 70 chr10 46637609 46638333 -98950955 - L1MEc LINE L1 -4068 2495 1778 * 325 216 72 0 chr10 46638352 46638491 -98950797 + L1MEc LINE L1 2098 2246 -4150 621 322 36 18 chr10 46638584 46638969 -98950319 - L1MEc LINE L1 -4814 1570 1179 779 175 113 46 chr10 46639147 46639387 -98949901 - L1MC5 LINE L1 -498 7463 7208 315 330 38 29 chr10 46639427 46639636 -98949652 - HAL1b LINE L1 -744 604 394 347 321 32 62 chr10 46639823 46640131 -98949157 + MLT1J LTR MaLR 209 507 -4 2008 114 21 0 chr10 46640146 46640436 -98948852 + AluSx SINE Alu 1 296 -16 224 305 21 0 chr10 46640485 46640580 -98948708 + L2 LINE L2 2058 2154 -1160 250 316 171 36 chr10 46640942 46641152 -98948136 + L2 LINE L2 2928 3193 -120 2054 126 0 3 chr10 46641152 46641453 -98947835 + AluSx SINE Alu 1 300 -12 250 316 171 36 chr10 46641453 46641546 -98947742 + L2 LINE L2 3193 3272 -41 339 317 69 90 chr10 46641825 46642260 -98947028 - HAL1 LINE L1 -930 1577 1152 2124 95 14 3 chr10 46645028 46645322 -98943966 + AluSx SINE Alu 1 297 -15 264 275 29 0 chr10 46646522 46646591 -98942697 - L2 LINE L2 -1 3271 3201 405 0 0 0 chr10 46646596 46646641 -98942647 + (ATG)n Simple_repeat Simple_repeat 2 46 0 292 248 0 40 chr10 46646672 46646773 -98942515 - L1M4 LINE L1 -344 5830 5734 585 245 57 36 chr10 46646773 46646965 -98942323 - MIR SINE MIR -45 217 22 382 267 169 29 chr10 46649221 46649615 -98939673 + L2 LINE L2 2725 3216 -97 1055 220 36 12 chr10 46649616 46649866 -98939422 - L1PA15 LINE L1 0 6165 5910 237 272 109 14 chr10 46650143 46650290 -98938998 - L1ME4a LINE L1 0 6121 5961 253 287 9 35 chr10 46652769 46652884 -98936404 + L1ME LINE L1 5789 5900 -221 476 283 44 56 chr10 46654430 46654610 -98934678 + MER5B DNA MER1_type 1 178 0 617 316 83 4 chr10 46656648 46656876 -98932412 + MIR SINE MIR 17 262 0 223 245 0 0 chr10 46656876 46656929 -98932359 + (CTA)n Simple_repeat Simple_repeat 3 55 0 259 275 116 38 chr10 46657093 46657260 -98932028 - MLT1K LTR MaLR 0 588 435 497 233 193 7 chr10 46758198 46758348 -98830940 + MIR SINE MIR 28 205 -57 1877 139 7 20 chr10 46758357 46758372 -98830916 - AluSx SINE Alu -15 297 283 306 0 0 0 chr10 46758372 46758406 -98830882 + (TG)n Simple_repeat Simple_repeat 1 34 0 1877 139 7 20 chr10 46758406 46758691 -98830597 - AluSx SINE Alu -29 283 1 276 225 34 22 chr10 46759265 46759443 -98829845 + (TG)n Simple_repeat Simple_repeat 1 180 0 558 198 0 0 chr10 46759463 46759640 -98829648 + (TG)n Simple_repeat Simple_repeat 2 178 0 2286 114 20 0 chr10 46760197 46760503 -98828785 + AluSp SINE Alu 1 312 -1 202 232 29 14 chr10 46760702 46760771 -98828517 + MIR SINE MIR 62 131 -77 387 221 0 0 chr10 46760890 46761048 -98828240 + (CA)n Simple_repeat Simple_repeat 2 159 0 1345 350 61 40 chr10 46761127 46762243 -98827045 - L1M4 LINE L1 -1806 4340 3202 284 149 0 0 chr10 46762262 46762309 -98826979 - Alu SINE Alu -256 47 1 399 319 158 47 chr10 46762317 46762747 -98826541 - L1M4 LINE L1 -2876 3270 2793 2790 224 61 23 chr10 46763115 46763801 -98825487 - MER21B LTR ERV1 -113 750 39 3531 190 29 36 chr10 46764079 46764113 -98825175 + L1MD2 LINE L1 5557 5590 -769 2488 96 0 3 chr10 46764113 46764427 -98824861 - AluSq SINE Alu 0 313 1 3531 190 29 36 chr10 46764427 46765178 -98824110 + L1MD2 LINE L1 5590 6337 -22 2284 123 0 0 chr10 46765178 46765480 -98823808 - AluSx SINE Alu -10 302 1 23 54 0 0 chr10 46765481 46765518 -98823770 + AT_rich Low_complexity Low_complexity 1 37 0 240 293 0 13 chr10 46765855 46765930 -98823358 + C-rich Low_complexity Low_complexity 3 76 0 2293 96 0 0 chr10 46766147 46766452 -98822836 + AluSg SINE Alu 1 305 0 1474 213 0 0 chr10 46766452 46766738 -98822550 + L1ME LINE L1 5319 5604 -562 476 176 17 50 chr10 46766739 46766858 -98822430 + FLAM_C SINE Alu 1 115 -28 1954 112 11 4 chr10 46766873 46767140 -98822148 - AluSx SINE Alu -43 269 1 669 97 14 42 chr10 46767439 46767583 -98821705 + AluY SINE Alu 167 306 -5 979 90 52 7 chr10 46767583 46767738 -98821550 + Tigger4(Zombi) DNA MER2_type 2545 2706 -25 1919 140 7 14 chr10 46767738 46768031 -98821257 - AluSx SINE Alu -14 298 8 2125 84 44 20 chr10 46768040 46768337 -98820951 - AluY SINE Alu -7 304 1 1057 98 0 0 chr10 46768339 46768471 -98820817 - AluSp SINE Alu -181 132 1 1139 172 25 54 chr10 46768474 46768630 -98820658 - AluSg/x SINE Alu -18 292 133 2296 78 30 0 chr10 46768630 46768925 -98820363 - AluY SINE Alu -7 304 1 2142 106 10 10 chr10 46768931 46769223 -98820065 - AluSq SINE Alu -21 292 1 1139 172 25 54 chr10 46769223 46769263 -98820025 - AluSg/x SINE Alu -182 128 95 4733 86 25 20 chr10 46769263 46769405 -98819883 + LTR8 LTR ERV1 1 141 -550 1709 110 50 50 chr10 46769405 46769712 -98819576 - AluSq SINE Alu 0 309 3 4733 86 25 20 chr10 46769712 46770256 -98819032 + LTR8 LTR ERV1 141 691 0 310 149 0 0 chr10 46770265 46770312 -98818976 + AluSq/x SINE Alu 57 103 -199 246 152 0 0 chr10 46770315 46770362 -98818926 - AluS SINE Alu -155 148 108 401 119 0 0 chr10 46770362 46770421 -98818867 - AluS SINE Alu -259 59 1 2404 98 3 0 chr10 46770423 46770730 -98818558 - AluSp SINE Alu -5 308 1 1445 170 61 47 chr10 46770732 46771074 -98818214 - LTR54 LTR ERV1 -30 480 134 1068 168 0 41 chr10 46771157 46771172 -98818116 - AluJb SINE Alu -2 310 296 1993 73 112 38 chr10 46771172 46771459 -98817829 - AluSq SINE Alu -1 312 5 2109 125 0 4 chr10 46771459 46771740 -98817548 - AluSx SINE Alu -31 281 2 1068 168 0 41 chr10 46771740 46771919 -98817369 - AluJb SINE Alu -14 298 123 357 143 0 0 chr10 46771923 46772000 -98817288 - L1M4 LINE L1 -1657 4489 4413 2320 121 0 0 chr10 46772007 46772304 -98816984 - AluSq SINE Alu -16 297 1 2352 62 45 3 chr10 46772311 46772602 -98816686 - AluY SINE Alu -8 303 1 1717 150 20 41 chr10 46772868 46773162 -98816126 - AluJo SINE Alu -22 290 3 1729 175 30 0 chr10 46773880 46774177 -98815111 + AluJb SINE Alu 1 306 -6 1892 95 0 12 chr10 46775362 46775615 -98813673 + AluSq SINE Alu 1 250 -63 29 0 0 0 chr10 46775711 46775740 -98813548 + AT_rich Low_complexity Low_complexity 1 29 0 803 284 240 20 chr10 46775869 46776071 -98813217 + L2 LINE L2 1706 1862 -1451 2259 104 0 7 chr10 46776071 46776360 -98812928 - AluSx SINE Alu -17 295 9 803 284 240 20 chr10 46776360 46777334 -98811954 + L2 LINE L2 1862 3150 -163 2089 143 0 6 chr10 46777415 46777729 -98811559 + AluSx SINE Alu 1 312 0 190 383 50 0 chr10 46778178 46778319 -98810969 + MIR SINE MIR 2 149 -113 357 288 158 19 chr10 46778983 46779198 -98810090 + LTR16A LTR ERVL 57 301 -149 8427 55 2 1 chr10 46779475 46780443 -98808845 - LTR5 LTR ERVK 0 969 1 1201 146 35 10 chr10 46781056 46781281 -98808007 - AluJb SINE Alu 0 312 86 560 254 49 0 chr10 46781284 46781426 -98807862 + HERV16 LTR ERVL 982 1130 -3866 1066 294 47 7 chr10 46781590 46781984 -98807304 + HERV16 LTR ERVL 1758 2175 -2904 733 139 0 0 chr10 46781985 46782100 -98807188 - AluSp/q SINE Alu -3 310 196 1093 199 164 0 chr10 46782100 46782331 -98806957 - AluSx SINE Alu -43 269 1 274 255 41 10 chr10 46782333 46782351 -98806937 - L1MA10 LINE L1 -65 6269 6252 925 213 29 126 chr10 46782351 46782646 -98806642 - L1ME1 LINE L1 -76 6090 5768 384 100 0 0 chr10 46782646 46782706 -98806582 - Alu SINE Alu 0 302 243 925 213 29 126 chr10 46782706 46782765 -98806523 - L1ME1 LINE L1 -398 5768 5705 2063 108 40 20 chr10 46782765 46783061 -98806227 - AluSg SINE Alu -8 302 1 925 213 29 126 chr10 46783061 46783228 -98806060 - L1ME1 LINE L1 -461 5705 5589 263 133 33 17 chr10 46783734 46783794 -98805494 - L1MCa LINE L1 -4304 2122 2062 2190 112 3 3 chr10 46784009 46784314 -98804974 - AluSx SINE Alu -7 305 1 576 179 0 0 chr10 46784316 46784422 -98804866 - MER34C LTR ERV1 -423 162 57 1697 140 35 0 chr10 46784422 46784707 -98804581 + LTR24 LTR ERV1 1 295 -172 771 253 0 0 chr10 46784707 46784873 -98804415 + FRAM SINE Alu 1 166 0 1574 151 35 0 chr10 46784876 46785177 -98804111 + MER34C LTR ERV1 151 465 -120 198 0 0 0 chr10 46785177 46785199 -98804089 + (TG)n Simple_repeat Simple_repeat 2 23 0 671 179 37 0 chr10 46785262 46785396 -98803892 + MER34C LTR ERV1 445 583 -2 205 358 85 20 chr10 46785440 46785686 -98803602 - L2 LINE L2 -1740 1574 1313 332 296 51 14 chr10 46785724 46785940 -98803348 + L1ME3A LINE L1 5108 5331 -815 * 2782 136 19 8 chr10 46785911 46786442 -98802846 + L1MA8 LINE L1 5594 6130 -161 449 206 0 10 chr10 46786442 46786539 -98802749 + FLAM_A SINE Alu 34 129 -13 2339 87 0 3 chr10 46786541 46786851 -98802437 + AluY SINE Alu 1 309 -2 962 164 12 0 chr10 46786873 46787044 -98802244 + L1MA8 LINE L1 6115 6287 -4 1075 208 12 8 chr10 46787057 46787302 -98801986 + L1MB7 LINE L1 5865 6110 -74 414 269 12 25 chr10 46787308 46787468 -98801820 + L1ME3A LINE L1 5317 5474 -690 1907 195 67 34 chr10 46787504 46787766 -98801522 - MLT1D LTR MaLR 0 505 218 1928 156 13 3 chr10 46787766 46788073 -98801215 - AluJb SINE Alu -2 310 1 1907 195 67 34 chr10 46788073 46788288 -98801000 - MLT1D LTR MaLR -287 218 12 215 325 24 0 chr10 46788421 46788504 -98800784 + L2 LINE L2 2811 2895 -419 378 257 83 94 chr10 46788523 46788811 -98800477 + MER21B LTR ERV1 28 312 -551 366 298 48 12 chr10 46788809 46788977 -98800311 + MER77 LTR ERV1 305 478 -127 * 440 255 38 65 chr10 46789397 46789581 -98799707 + L2 LINE L2 3101 3279 -34 349 240 8 71 chr10 46789581 46789707 -98799581 + L1ME3A LINE L1 5667 5784 -378 678 179 29 7 chr10 46789726 46789866 -98799422 - L1MA8 LINE L1 -3 6288 6146 1593 168 34 3 chr10 46789878 46790199 -98799089 - MER44D DNA MER2_type 0 609 9 433 251 43 89 chr10 46790208 46790443 -98798845 + L1ME3A LINE L1 5778 6001 -169 1915 165 3 62 chr10 46790669 46791027 -98798261 + MER1B DNA MER1_type 1 337 0 256 364 25 51 chr10 46791053 46791289 -98797999 - L2 LINE L2 -2159 1155 926 2251 92 0 3 chr10 46791718 46792011 -98797277 + AluSx SINE Alu 1 292 -20 1166 227 72 38 chr10 46792020 46792255 -98797033 - L1ME1 LINE L1 -18 6148 5891 2106 120 0 3 chr10 46792255 46792555 -98796733 + AluSg SINE Alu 1 299 -11 1166 227 72 38 chr10 46792555 46792738 -98796550 - L1ME1 LINE L1 -275 5891 5716 1521 291 74 32 chr10 46792740 46793698 -98795590 + L1M4 LINE L1 2538 3535 -2611 308 177 165 0 chr10 46793715 46793794 -98795494 + L1ME3A LINE L1 6075 6166 -4 979 89 0 0 chr10 46793796 46793920 -98795368 + FRAM SINE Alu 37 160 -16 273 237 66 46 chr10 46793950 46794102 -98795186 + L1MC5 LINE L1 7773 7927 -34 501 248 207 16 chr10 46794106 46794424 -98794864 + L2 LINE L2 2698 3070 -243 826 217 12 0 chr10 46794444 46794610 -98794678 + FAM SINE Alu 8 175 -10 349 364 92 14 chr10 46794628 46794845 -98794443 + L2 LINE L2 3078 3311 -2 419 329 15 0 chr10 46795108 46795245 -98794043 + MIR SINE MIR 49 187 -75 2294 47 7 20 chr10 46795397 46795697 -98793591 - AluY SINE Alu -2 309 14 236 172 32 11 chr10 46795831 46795924 -98793364 + (CTCG)n Simple_repeat Simple_repeat 4 98 0 391 332 84 20 chr10 46796290 46796487 -98792801 + MIR SINE MIR 17 224 -38 190 288 175 12 chr10 46796810 46796890 -98792398 + MER5A DNA MER1_type 93 185 -4 304 275 33 0 chr10 46796910 46797001 -98792287 + MER5A DNA MER1_type 10 103 -86 1773 152 7 13 chr10 46797120 46797422 -98791866 + AluJo SINE Alu 1 300 -12 310 355 29 22 chr10 46797430 46797568 -98791720 - MER5B DNA MER1_type -4 174 36 203 267 17 0 chr10 46799785 46799845 -98789443 + (CA)n Simple_repeat Simple_repeat 1 61 0 1878 177 81 2 chr10 46799886 46800305 -98788983 + L1MA4A LINE L1 5852 6303 0 2097 109 0 16 chr10 46800554 46800858 -98788430 - AluSx SINE Alu -9 303 5 198 356 85 49 chr10 46802621 46802868 -98786420 - L2 LINE L2 -54 3259 3004 181 319 83 14 chr10 46804812 46804884 -98784404 - L3 LINE CR1 -210 1367 1291 1626 147 28 39 chr10 46807148 46807434 -98781854 + AluJo SINE Alu 1 283 -29 2040 133 0 3 chr10 46807434 46807727 -98781561 + AluSx SINE Alu 3 294 -18 247 281 90 11 chr10 46808355 46808444 -98780844 - MIR SINE MIR -117 145 50 1228 163 56 8 chr10 46808884 46809136 -98780152 - Tigger3(Golem) DNA MER2_type 0 3038 2775 201 291 51 0 chr10 46810660 46810739 -98778549 + L2 LINE L2 2550 2632 -682 437 274 124 27 chr10 46812567 46812753 -98776535 + L1M4 LINE L1 2753 2956 -3190 469 285 68 10 chr10 46813894 46814101 -98775187 - LTR16A1 LTR ERVL -25 432 214 183 321 48 12 chr10 46816261 46816345 -98772943 - MIR SINE MIR -141 121 35 253 285 45 40 chr10 46817831 46817980 -98771308 + MIR SINE MIR 43 190 -65 850 272 166 23 chr10 46819665 46820190 -98769098 - MLT1E2 LTR MaLR -13 613 14 307 344 32 16 chr10 46822935 46823060 -98766228 - MER5A DNA MER1_type -6 183 57 251 336 60 0 chr10 46823403 46823519 -98765769 - MIR3 SINE MIR -24 184 62 586 353 59 14 chr10 46824435 46824789 -98764499 + L2 LINE L2 2944 3313 0 385 244 31 100 chr10 46824818 46824978 -98764310 + L1ME LINE L1 5315 5463 -2345 10336 201 51 31 chr10 46825051 46825158 -98764130 - L1MB7 LINE L1 -19 6663 6560 2147 117 0 25 chr10 46825158 46825474 -98763814 - AluSx SINE Alu -4 308 1 1473 144 107 38 chr10 46825477 46825768 -98763520 - AluSx SINE Alu -1 311 1 10336 201 51 31 chr10 46825768 46827507 -98761781 - L1MB7 LINE L1 -123 6559 4856 180 77 0 0 chr10 46827507 46827533 -98761755 + (TG)n Simple_repeat Simple_repeat 2 27 0 10336 201 51 31 chr10 46827533 46829239 -98760049 - L1MB7 LINE L1 -1826 4856 3186 6567 70 5 278 chr10 46829239 46831147 -98758141 - SVA Other Other 0 1386 1 10336 201 51 31 chr10 46831147 46831476 -98757812 - L1MB7 LINE L1 -3496 3186 2865 2266 106 0 3 chr10 46831476 46831787 -98757501 - AluY SINE Alu -1 310 1 10336 201 51 31 chr10 46831787 46834263 -98755025 - L1MB7 LINE L1 -3817 2865 10 361 352 28 16 chr10 46834274 46834521 -98754767 + L1ME LINE L1 5561 5810 -311 316 382 6 6 chr10 46837523 46837701 -98751587 + (CA)n Simple_repeat Simple_repeat 1 178 0 814 297 58 31 chr10 46840086 46840635 -98748653 - L1ME LINE L1 -367 5803 5237 267 103 0 0 chr10 46840677 46840716 -98748572 + (CA)n Simple_repeat Simple_repeat 2 40 0 390 202 73 18 chr10 46840723 46840832 -98748456 - L2 LINE L2 -25 3288 3174 207 244 0 0 chr10 46841101 46841146 -98748142 - L2 LINE L2 -598 2716 2672 2441 133 63 24 chr10 46841182 46841222 -98748066 - MSTA LTR MaLR 0 428 391 2213 106 3 3 chr10 46841222 46841523 -98747765 + AluSx SINE Alu 1 301 -11 2441 133 63 24 chr10 46841523 46841894 -98747394 - MSTA LTR MaLR -37 391 1 202 226 0 19 chr10 46843780 46843833 -98745455 + L3 LINE CR1 1430 1481 -96 236 260 24 47 chr10 46844077 46844204 -98745084 + C-rich Low_complexity Low_complexity 6 129 0 271 362 106 10 chr10 46845131 46845330 -98743958 - L2 LINE L2 -1 3312 3095 234 178 0 0 chr10 46845443 46845488 -98743800 - MLT1I LTR MaLR -121 288 244 197 309 224 9 chr10 46845999 46846329 -98742959 - L2 LINE L2 -665 2649 2249 314 266 31 23 chr10 46846907 46847035 -98742253 + L2 LINE L2 2966 3094 -178 1324 98 0 0 chr10 46847351 46847549 -98741739 + AluSg/x SINE Alu 108 305 0 309 231 108 31 chr10 46847993 46848123 -98741165 + MIR3 SINE MIR 17 156 -52 187 320 0 0 chr10 46848914 46848964 -98740324 + L2 LINE L2 3221 3270 -2 1604 173 4 0 chr10 46850153 46850424 -98738864 + AluJb SINE Alu 40 311 -1 686 227 124 0 chr10 46850952 46851029 -98738259 + L1M4 LINE L1 4169 4235 -1911 192 40 0 0 chr10 46851029 46851054 -98738234 + (CA)n Simple_repeat Simple_repeat 2 26 0 686 227 124 0 chr10 46851054 46851170 -98738118 + L1M4 LINE L1 4235 4386 -1760 1875 187 80 46 chr10 46851172 46851610 -98737678 - MLT1C LTR MaLR -14 453 1 1312 158 117 4 chr10 46851657 46851904 -98737384 + AluJo SINE Alu 23 297 -15 1540 181 23 3 chr10 46851907 46852256 -98737032 + L1M4 LINE L1 4407 4762 -1384 1748 158 0 7 chr10 46852256 46852567 -98736721 + AluJb SINE Alu 3 311 0 820 214 23 12 chr10 46852590 46852763 -98736525 + FAM SINE Alu 1 175 0 583 300 44 44 chr10 46852765 46853004 -98736284 + L1ME LINE L1 2903 3144 -3002 1561 184 13 19 chr10 46853004 46853351 -98735937 + AluSx SINE Alu 1 312 0 583 300 44 44 chr10 46853351 46853408 -98735880 + L1ME LINE L1 3143 3199 -2947 699 326 155 24 chr10 46853733 46854270 -98735018 + L1ME LINE L1 4192 4798 -1348 1062 167 0 63 chr10 46854270 46854509 -98734779 + AluJo SINE Alu 85 308 -4 320 294 153 44 chr10 46854519 46854747 -98734541 + L1ME LINE L1 4783 5035 -1111 2110 116 0 0 chr10 46854847 46855139 -98734149 - AluSx SINE Alu -20 292 1 1541 183 28 3 chr10 46855260 46855544 -98733744 + AluJo SINE Alu 11 301 -11 244 228 18 0 chr10 46855799 46855856 -98733432 + L1ME LINE L1 5536 5593 -528 556 284 83 25 chr10 46856447 46856725 -98732563 - HsTC2 DNA Tc2 -278 1620 1151 262 281 52 0 chr10 46856926 46857022 -98732266 - MIR SINE MIR -141 121 21 1642 161 13 32 chr10 46859010 46859326 -98729962 - AluJo SINE Alu -2 310 1 1860 146 13 16 chr10 46860093 46860402 -98728886 + AluJb SINE Alu 1 308 -4 317 357 8 8 chr10 46860448 46860574 -98728714 - MIR SINE MIR -105 157 32 588 239 154 7 chr10 46860757 46861027 -98728261 + MLT1H1 LTR MaLR 8 283 -272 1162 155 21 0 chr10 46861048 46861235 -98728053 + AluJb SINE Alu 47 237 -75 290 301 82 92 chr10 46861272 46861460 -98727828 + L2 LINE L2 1706 1894 -1420 2029 121 0 0 chr10 46861460 46861749 -98727539 - AluSq SINE Alu -11 302 14 290 301 82 92 chr10 46861749 46862122 -98727166 + L2 LINE L2 1894 2261 -1053 1746 140 11 106 chr10 46862164 46862543 -98726745 - LTR3b LTR ERVK 0 500 158 446 0 0 0 chr10 46862568 46862619 -98726669 - HERVK14 LTR ERVK -61 5884 5834 366 152 0 18 chr10 46862620 46862693 -98726595 - MER41C LTR ERV1 -493 61 1 1273 86 23 0 chr10 46862693 46862867 -98726421 - HERVK22 LTR ERVK -186 5759 5582 1174 157 18 42 chr10 46862867 46862910 -98726378 - MER41C-int LTR ERV1 0 7756 7545 2615 128 43 20 chr10 46862912 46863420 -98725868 - HERVK22 LTR ERVK -373 5572 2995 * 3394 213 62 1 chr10 46863419 46864141 -98725147 - HERVK22 LTR ERVK -4934 2309 1544 1891 85 37 0 chr10 46864143 46864415 -98724873 - LTR22B LTR ERVK -210 282 1 22196 105 8 5 chr10 46864415 46867588 -98721700 - HERVK22 LTR ERVK 0 6837 3656 342 127 0 0 chr10 46867589 46867644 -98721644 - HERVK22 LTR ERVK -4293 2544 2490 * 519 100 38 0 chr10 46867633 46867713 -98721575 - HERVK22 LTR ERVK -3930 2907 2825 * 700 181 51 0 chr10 46867710 46867848 -98721440 - HERVK22 LTR ERVK -4366 2471 2327 275 0 0 28 chr10 46868259 46868295 -98720993 + (CCCCCG)n Simple_repeat Simple_repeat 1 35 0 4117 145 10 26 chr10 46868327 46868683 -98720605 - HERVK22 LTR ERVK -6143 694 352 2190 78 3 0 chr10 46868683 46868994 -98720294 + AluSp SINE Alu 1 312 0 4117 145 10 26 chr10 46868994 46869338 -98719950 - HERVK22 LTR ERVK -6485 352 4 3424 102 20 20 chr10 46869341 46869833 -98719455 - LTR22B LTR ERVK 0 492 1 644 241 6 6 chr10 46869834 46869992 -98719296 + MER33 DNA MER1_type 6 163 -161 1151 161 0 10 chr10 46869992 46870184 -98719104 + AluJo SINE Alu 1 190 -122 1650 88 104 4 chr10 46870195 46870444 -98718844 - LTR12 LTR ERV1 -440 274 1 670 83 0 0 chr10 46870831 46870915 -98718373 + AluS SINE Alu 2 85 -227 21 57 0 0 chr10 46871271 46871306 -98717982 + AT_rich Low_complexity Low_complexity 1 35 0 650 234 13 0 chr10 46872283 46872441 -98716847 + L1MB7 LINE L1 4211 4370 -1776 1570 182 6 41 chr10 46872442 46872760 -98716528 + AluJo SINE Alu 1 307 -5 237 65 0 0 chr10 46872780 46872811 -98716477 + (GGGGA)n Simple_repeat Simple_repeat 3 33 0 1009 266 30 32 chr10 46872830 46873202 -98716086 + L1MB7 LINE L1 5696 6066 -118 250 274 80 26 chr10 46875215 46875328 -98713960 - MIR SINE MIR -55 207 89 904 226 113 28 chr10 46877673 46877724 -98711564 + MER58B DNA MER1_type 37 82 -2338 1990 110 28 0 chr10 46877724 46878055 -98711233 - AluSg SINE Alu 0 310 1 904 226 113 28 chr10 46878055 46878251 -98711037 + MER58B DNA MER1_type 82 305 -36 374 309 133 5 chr10 46878508 46878718 -98710570 - MIR SINE MIR 0 262 26 397 279 32 50 chr10 46878780 46879024 -98710264 - L1MC4a LINE L1 -305 5816 5600 396 0 0 0 chr10 46879047 46879091 -98710197 + (TG)n Simple_repeat Simple_repeat 1 44 0 346 203 141 55 chr10 46879091 46879219 -98710069 - MIR3 SINE MIR 0 208 70 403 311 32 37 chr10 46880984 46881174 -98708114 - MIR SINE MIR 0 262 74 286 250 120 0 chr10 46881603 46881703 -98707585 + MIR3 SINE MIR 67 178 -30 2487 238 137 19 chr10 46882752 46883535 -98705753 + L1MB5 LINE L1 5299 6173 -1 214 211 0 0 chr10 46885971 46886009 -98703279 + (TTA)n Simple_repeat Simple_repeat 1 38 0 190 279 59 15 chr10 46886853 46886921 -98702367 + MIR SINE MIR 123 193 -69 616 162 26 0 chr10 46891762 46891879 -98697409 - MER3 DNA MER1_type 0 209 90 303 339 76 0 chr10 46892845 46892963 -98696325 + L2 LINE L2 3187 3313 0 213 255 0 0 chr10 46894560 46894607 -98694681 - MIR SINE MIR -108 154 108 201 311 16 0 chr10 46894677 46894738 -98694550 + GA-rich Low_complexity Low_complexity 4 65 0 181 292 21 0 chr10 46895335 46895383 -98693905 - MIR SINE MIR -212 50 2 344 226 158 30 chr10 46895891 46896024 -98693264 - MIR SINE MIR -79 183 34 854 144 8 0 chr10 46896056 46896188 -98693100 - FLAM_C SINE Alu 0 133 1 227 269 123 23 chr10 46896404 46896542 -98692746 - MIR SINE MIR -3 259 106 21 36 0 0 chr10 46898622 46898650 -98690638 + GC_rich Low_complexity Low_complexity 1 28 0 195 169 0 45 chr10 46898669 46898758 -98690530 + (CCCCG)n Simple_repeat Simple_repeat 5 89 0 326 309 43 56 chr10 46899221 46899393 -98689895 + L2 LINE L2 2185 2358 -914 2380 80 0 0 chr10 46899393 46899692 -98689596 + AluSc SINE Alu 3 301 -8 326 309 43 56 chr10 46899692 46899762 -98689526 + L2 LINE L2 2358 3235 -37 241 173 0 0 chr10 46899797 46899849 -98689439 - L1MC4 LINE L1 -1340 6702 6651 237 208 0 0 chr10 46900869 46900922 -98688366 - L1ME3 LINE L1 -4 6158 6106 1286 143 62 0 chr10 46900934 46901144 -98688144 - AluJo SINE Alu -5 307 85 384 236 11 0 chr10 46901144 46901233 -98688055 - L1ME2 LINE L1 -57 6107 6018 330 305 124 41 chr10 46901643 46901958 -98687330 - MARNA DNA Mariner -142 444 104 245 149 128 0 chr10 46902739 46902786 -98686502 + L2 LINE L2 3220 3272 0 218 214 0 54 chr10 46903131 46903187 -98686101 - L2 LINE L2 -6 3266 3214 627 265 147 52 chr10 46903750 46904056 -98685232 - MLT1K LTR MaLR -114 474 140 638 222 56 11 chr10 46904342 46904522 -98684766 - MER5A DNA MER1_type -1 188 1 574 256 241 23 chr10 46904887 46905149 -98684139 - L2 LINE L2 0 3313 2995 2214 108 0 0 chr10 46906209 46906505 -98682783 + AluSc SINE Alu 1 296 -13 2195 82 0 7 chr10 46906584 46906878 -98682410 + AluY SINE Alu 1 292 -19 1040 134 53 53 chr10 46906894 46907141 -98682147 + L1MA8 LINE L1 6042 6288 -3 797 192 27 0 chr10 46907161 46907307 -98681981 + AluJo SINE Alu 2 151 -161 1904 97 75 0 chr10 46907351 46907630 -98681658 + AluSx SINE Alu 1 300 -12 373 268 155 14 chr10 46907795 46907937 -98681351 + L3 LINE CR1 1334 1495 -82 1280 136 91 0 chr10 46909212 46909455 -98679833 - L1MD3 LINE L1 0 7995 7731 2165 110 0 0 chr10 46909821 46910122 -98679166 + AluSg SINE Alu 1 301 -9 253 231 0 0 chr10 46910263 46910315 -98678973 + L1P LINE L1 3625 3676 -2470 363 23 0 0 chr10 46910316 46910360 -98678928 + (CA)n Simple_repeat Simple_repeat 2 45 0 771 276 112 51 chr10 46910927 46911355 -98677933 + HAL1 LINE L1 833 1286 -1221 518 274 65 49 chr10 46911395 46911640 -98677648 + HAL1 LINE L1 1426 1674 -833 4420 189 95 36 chr10 46911829 46912932 -98676356 + L1MC3 LINE L1 6616 7783 -2 2210 91 7 0 chr10 46913005 46913301 -98675987 - AluSq SINE Alu -15 298 1 257 237 158 0 chr10 46913403 46913479 -98675809 + MIR SINE MIR 53 140 -122 558 241 140 38 chr10 46914019 46914255 -98675033 - MIR SINE MIR -1 261 2 328 356 16 21 chr10 46914774 46914965 -98674323 - L2 LINE L2 -888 2426 2237 1824 145 0 0 chr10 46915284 46915567 -98673721 + AluSx SINE Alu 4 286 -26 672 202 16 8 chr10 46915625 46915754 -98673534 - L2 LINE L2 0 3313 3184 202 330 70 9 chr10 46915811 46915926 -98673362 + L2 LINE L2 1220 1341 -1973 296 353 67 20 chr10 46915926 46916181 -98673107 + L2 LINE L2 2255 2521 -793 432 302 160 0 chr10 46916307 46916476 -98672812 + L2 LINE L2 3118 3313 0 1057 231 19 0 chr10 46916667 46916883 -98672405 - MER58A DNA MER1_type -1 223 4 203 231 135 0 chr10 46917246 46917298 -98671990 + L2 LINE L2 3162 3220 -93 1639 159 4 7 chr10 46918167 46918437 -98670851 - AluJb SINE Alu -43 269 1 4120 176 58 14 chr10 46918834 46919676 -98669612 - L1MB7 LINE L1 0 6995 6117 * 5150 183 56 45 chr10 46919675 46919748 -98669540 - L1MB7 LINE L1 -4890 1965 1894 788 206 112 50 chr10 46919748 46919913 -98669375 + MER2 DNA MER2_type 4 157 -187 2345 64 10 0 chr10 46919913 46920209 -98669079 + AluY SINE Alu 1 299 -12 788 206 112 50 chr10 46920209 46920364 -98668924 + MER2 DNA MER2_type 157 344 0 5150 183 56 45 chr10 46920364 46921726 -98667562 - L1MB7 LINE L1 -4961 1894 521 6944 160 39 11 chr10 46921772 46923013 -98666275 - L1MCa LINE L1 -5129 1297 23 919 169 0 0 chr10 46923203 46923363 -98665925 + FRAM SINE Alu 1 159 -17 645 98 0 0 chr10 46923374 46923456 -98665832 + AluS SINE Alu 2 83 -230 2073 48 24 0 chr10 46923456 46923707 -98665581 - MER11B LTR ERVK -979 257 1 908 321 93 15 chr10 46923708 46924107 -98665181 + L2 LINE L2 1838 2267 -1047 1788 132 23 3 chr10 46924171 46924475 -98664813 + AluJb SINE Alu 1 310 -2 311 182 76 0 chr10 46924489 46924555 -98664733 + L1ME4a LINE L1 6016 6086 -35 29 0 0 0 chr10 46926629 46926658 -98662630 + AT_rich Low_complexity Low_complexity 1 29 0 297 184 204 20 chr10 46927126 46927273 -98662015 - L1ME2 LINE L1 -201 5963 5790 1184 189 56 14 chr10 46927274 46927740 -98661548 - MER34 LTR ERV1 0 542 27 298 265 155 88 chr10 46927750 46928067 -98661221 - L1ME2 LINE L1 -370 5792 5455 345 299 27 54 chr10 46928107 46928254 -98661034 - L1ME2 LINE L1 -840 5306 5164 6096 126 24 10 chr10 46928298 46929258 -98660030 - L1MC1 LINE L1 0 6333 5361 614 102 0 93 chr10 46929258 46929366 -98659922 - AluJb SINE Alu -12 300 203 1762 264 112 77 chr10 46929675 46930958 -98658330 - L1ME2 LINE L1 -1127 5019 3657 1614 152 0 64 chr10 46930958 46931286 -98658002 - AluJo SINE Alu -5 307 1 1762 264 112 77 chr10 46931286 46931758 -98657530 - L1ME2 LINE L1 -2489 3657 3203 964 242 60 39 chr10 46931755 46932338 -98656950 - L1ME LINE L1 -616 5531 4926 * 360 294 116 19 chr10 46932332 46932837 -98656451 - L1MEd LINE L1 -4538 1591 1014 * 301 247 41 10 chr10 46932849 46932946 -98656342 + L1MEd LINE L1 895 994 -5125 2347 50 3 16 chr10 46932947 46933250 -98656038 - AluY SINE Alu -12 299 1 397 320 95 59 chr10 46933292 46933682 -98655606 - L1MEd LINE L1 -5508 611 208 186 288 126 36 chr10 46934511 46934622 -98654666 - MIR SINE MIR -72 136 16 259 264 46 23 chr10 46934883 46934970 -98654318 - MER5A DNA MER1_type -54 135 47 499 252 15 15 chr10 46935318 46935449 -98653839 - MER3 DNA MER1_type -77 132 2 351 299 30 25 chr10 46943672 46943869 -98645419 + MER113 DNA MER1_type? 26 223 -298 202 211 48 66 chr10 46944371 46944537 -98644751 + (CAGCC)n Simple_repeat Simple_repeat 4 166 0 * 405 214 9 73 chr10 46944452 46944799 -98644489 + (CCCCAG)n Simple_repeat Simple_repeat 1 324 0 237 183 0 56 chr10 46944814 46944885 -98644403 + C-rich Low_complexity Low_complexity 5 71 0 477 0 0 0 chr10 46948994 46949047 -98640241 + (CA)n Simple_repeat Simple_repeat 2 54 0 354 233 121 0 chr10 46949288 46949404 -98639884 + MER5A DNA MER1_type 23 152 -37 250 270 54 0 chr10 46949431 46949505 -98639783 - MIR SINE MIR -55 153 76 225 250 17 33 chr10 46949504 46949564 -98639724 + L2 LINE L2 3007 3065 -207 * 189 303 192 0 chr10 46949556 46949655 -98639633 + L2 LINE L2 3191 3308 -5 * 331 288 72 0 chr10 46951633 46951744 -98637544 - MIR3 SINE MIR -1 207 89 225 0 0 0 chr10 46952577 46952602 -98636686 + (CCCGG)n Simple_repeat Simple_repeat 2 26 0 62 88 0 0 chr10 46952690 46952850 -98636438 + GC_rich Low_complexity Low_complexity 1 160 0 242 247 32 11 chr10 46953418 46953511 -98635777 + CT-rich Low_complexity Low_complexity 1 95 0 1620 104 4 33 chr10 46954219 46954489 -98634799 - AluY SINE Alu -48 263 2 943 105 37 73 chr10 46954491 46954643 -98634645 - MER46B DNA MER2_type -2672 59 39 2014 149 3 0 chr10 46954643 46954944 -98634344 - AluJb SINE Alu -8 304 3 943 105 37 73 chr10 46954944 46954982 -98634306 - MER46B DNA MER2_type -2692 39 1 1767 128 39 39 chr10 46955107 46955412 -98633876 + AluSx SINE Alu 1 305 -7 607 211 54 0 chr10 46955608 46955774 -98633514 + Charlie2 DNA MER1_type 2645 2819 -43 416 350 117 7 chr10 46955954 46956263 -98633025 - L2 LINE L2 -749 2565 2223 2382 58 7 0 chr10 46956343 46956637 -98632651 - AluSc SINE Alu -13 296 1 805 127 16 0 chr10 46956639 46956765 -98632523 - AluJo/FLAM SINE Alu -170 132 5 29 0 0 0 chr10 46956980 46957009 -98632279 + AT_rich Low_complexity Low_complexity 1 29 0 282 73 0 0 chr10 46957038 46957079 -98632209 + (CA)n Simple_repeat Simple_repeat 2 42 0 201 308 0 0 chr10 46957452 46957530 -98631758 + (TA)n Simple_repeat Simple_repeat 2 79 0 721 177 24 0 chr10 46957590 46957714 -98631574 + FLAM_A SINE Alu 4 130 -3 2393 40 40 7 chr10 46957714 46958015 -98631273 + AluY SINE Alu 1 311 0 2350 90 0 0 chr10 46958044 46958343 -98630945 - AluSx SINE Alu -13 299 1 328 371 53 0 chr10 46958606 46958757 -98630531 - MIR SINE MIR -1 261 103 234 274 21 21 chr10 46959349 46959444 -98629844 + (CAGAGA)n Simple_repeat Simple_repeat 2 96 0 * 261 194 0 16 chr10 46959384 46959446 -98629842 + GA-rich Low_complexity Low_complexity 2 62 0 368 336 121 22 chr10 46959644 46959867 -98629421 - HAL1 LINE L1 -2179 328 84 2375 78 7 0 chr10 46959924 46960232 -98629056 + AluSx SINE Alu 1 310 -2 700 213 24 0 chr10 46960243 46960370 -98628918 + FLAM_C SINE Alu 2 131 -12 386 277 42 8 chr10 46960717 46960836 -98628452 + MIR SINE MIR 21 143 -119 745 165 16 24 chr10 46960865 46960992 -98628296 + FLAM_C SINE Alu 1 126 -7 659 225 60 126 chr10 46962181 46962446 -98626842 + MER69 DNA AcHobo 1938 2148 -378 2144 99 0 48 chr10 46962446 46962760 -98626528 + AluSq SINE Alu 1 299 -14 659 225 60 126 chr10 46962760 46963049 -98626239 + MER69 DNA AcHobo 2148 2455 -71 940 147 64 0 chr10 46963051 46963208 -98626080 - AluSg/x SINE Alu -12 300 134 1964 121 17 7 chr10 46963208 46963505 -98625783 - AluSx SINE Alu -12 300 1 21 0 0 0 chr10 46963903 46963924 -98625364 + AT_rich Low_complexity Low_complexity 1 21 0 315 67 0 0 chr10 46965038 46965083 -98624205 + LTR54 LTR ERV1 4 48 -462 295 73 200 0 chr10 46965115 46965170 -98624118 + AluSp SINE Alu 54 119 -184 1022 250 64 5 chr10 46965284 46967029 -98622259 - L1M4 LINE L1 -1217 4929 2992 336 213 0 27 chr10 46967321 46967396 -98621892 - L1ME4a LINE L1 0 6121 6049 2399 133 3 0 chr10 46967481 46967842 -98621446 - L1PB1 LINE L1 -2 6149 5788 4392 204 45 19 chr10 46967944 46969157 -98620131 + L1MD1 LINE L1 4989 6242 0 1959 154 0 13 chr10 46972056 46972361 -98616927 - AluJo SINE Alu -11 301 1 24 53 0 0 chr10 46972639 46972677 -98616611 + AT_rich Low_complexity Low_complexity 1 38 0 330 323 56 56 chr10 46972964 46973283 -98616005 + L1MEd LINE L1 318 636 -5483 379 322 79 0 chr10 46973336 46973596 -98615692 + L1 LINE L1 4791 5073 -1073 1580 230 210 19 chr10 46973626 46974222 -98615066 - L1M4b LINE L1 -5820 1039 330 714 296 25 8 chr10 46974224 46974464 -98614824 - MLT1D LTR MaLR 0 505 262 496 246 45 69 chr10 46974464 46974752 -98614536 - L1MEc LINE L1 -4233 2163 1883 1447 300 67 17 chr10 46974863 46975734 -98613554 - L1MEc LINE L1 -4514 1882 969 551 313 52 0 chr10 46975776 46975968 -98613320 + L3 LINE CR1 1311 1512 -65 257 156 0 0 chr10 46976445 46976490 -98612798 + MLT1L LTR MaLR 350 394 -221 180 277 98 27 chr10 46978792 46978904 -98610384 + L2 LINE L2 2370 2489 -825 1437 214 79 9 chr10 46979419 46979760 -98609528 + MLT1A1 LTR MaLR 1 365 0 202 143 24 0 chr10 46979801 46979843 -98609445 + A-rich Low_complexity Low_complexity 3 45 0 777 234 66 16 chr10 46980077 46980796 -98608492 - L1MD2 LINE L1 -428 5738 5032 10279 163 52 8 chr10 46980821 46982824 -98606464 - ERVL-B1 LTR ERVL -357 5407 3315 7888 46 10 156 chr10 46982843 46984527 -98604761 + SVA Other Other 1 1386 0 1621 178 57 0 chr10 46984527 46984825 -98604463 - ERVL-B1 LTR ERVL -2371 3283 2969 * 1810 244 81 6 chr10 46984816 46985312 -98603976 - ERVL-B1 LTR ERVL -5230 534 2 1848 197 95 41 chr10 46985313 46985806 -98603482 - MLT2B1 LTR ERVL 0 520 1 2605 142 60 22 chr10 46985811 46985853 -98603435 + L1MA5 LINE L1 5729 5768 -532 198 0 0 0 chr10 46985853 46985875 -98603413 + (TG)n Simple_repeat Simple_repeat 2 23 0 2605 142 60 22 chr10 46985875 46986383 -98602905 + L1MA5 LINE L1 5768 6300 0 180 0 0 0 chr10 46986920 46986940 -98602348 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 8234 263 64 27 chr10 46987110 46987913 -98601375 - L1MD2 LINE L1 0 6753 5981 1865 143 8 0 chr10 46987913 46988179 -98601109 - AluSx SINE Alu -44 268 1 8234 263 64 27 chr10 46988179 46990635 -98598653 - L1MD2 LINE L1 -772 5981 3317 1816 160 28 14 chr10 46990635 46990923 -98598365 - AluJb SINE Alu -20 292 1 8234 263 64 27 chr10 46990923 46991700 -98597588 - L1MD2 LINE L1 -3436 3317 2570 935 279 133 42 chr10 46991775 46992280 -98597008 - MER77 LTR ERV1 -1 604 54 3108 247 99 15 chr10 46992311 46993545 -98595743 - L1MD2 LINE L1 -4012 2528 1106 1805 193 3 0 chr10 46993545 46993856 -98595432 - AluJo SINE Alu 0 312 1 3108 247 99 15 chr10 46993856 46994129 -98595159 - L1MD2 LINE L1 -5434 1106 857 785 268 61 23 chr10 46994303 46994564 -98594724 - L1MD2 LINE L1 -6208 332 62 232 278 56 32 chr10 46994595 46994721 -98594567 - L1P4 LINE L1 -558 5605 5477 363 344 92 54 chr10 46995711 46996005 -98593283 + HAL1 LINE L1 1251 1555 -952 1038 90 8 0 chr10 46996355 46996489 -98592799 + AluSq/x SINE Alu 1 135 -177 2139 115 0 3 chr10 46996489 46996784 -98592504 + AluSx SINE Alu 1 294 -18 290 350 49 28 chr10 46997177 46997241 -98592047 + MIR SINE MIR 4 65 -197 1634 187 36 3 chr10 46997241 46997573 -98591715 - MER2 DNA MER2_type -1 343 1 290 350 49 28 chr10 46997573 46997651 -98591637 + MIR SINE MIR 65 149 -113 506 290 67 47 chr10 46997704 46998282 -98591006 - L1ME LINE L1 -503 5661 5074 1724 80 52 12 chr10 46998514 46998765 -98590523 + L1PA8 LINE L1 5906 6166 -6 22 0 0 0 chr10 46998765 46998787 -98590501 + AT_rich Low_complexity Low_complexity 1 22 0 406 340 95 53 chr10 46999213 46999592 -98589696 - L1ME LINE L1 -2683 3463 3069 257 351 8 0 chr10 46999599 46999733 -98589555 - L1ME LINE L1 -3122 3024 2890 225 333 18 0 chr10 46999777 46999888 -98589400 - L1ME LINE L1 -3128 3018 2906 2016 155 0 3 chr10 46999914 47000211 -98589077 - AluSx SINE Alu -16 296 1 189 0 26 77 chr10 47000435 47000474 -98588814 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 866 209 6 0 chr10 47001072 47001244 -98588044 + L1MB3 LINE L1 5659 5831 -352 950 96 16 0 chr10 47001244 47001369 -98587919 - BC200 scRNA scRNA -60 140 14 1378 193 55 40 chr10 47001372 47001751 -98587537 + L1MB3 LINE L1 5798 6182 -1 267 254 123 9 chr10 47001757 47001871 -98587417 + MIR SINE MIR 20 146 -116 230 0 0 32 chr10 47003126 47003157 -98586131 + (TTTTTG)n Simple_repeat Simple_repeat 3 32 0 1093 237 78 3 chr10 47003199 47003532 -98585756 - MER47A DNA MER2_type 0 366 9 199 261 159 0 chr10 47003553 47003622 -98585666 + MIR SINE MIR 64 143 -119 213 341 0 0 chr10 47003664 47003746 -98585542 + (TATG)n Simple_repeat Simple_repeat 3 84 0 218 190 0 17 chr10 47003750 47003808 -98585480 + (TG)n Simple_repeat Simple_repeat 2 58 0 2309 83 3 42 chr10 47005024 47005337 -98583951 - AluSg SINE Alu -9 301 1 426 306 0 0 chr10 47005637 47005807 -98583481 + (CA)n Simple_repeat Simple_repeat 1 170 0 276 185 0 0 chr10 47005828 47005882 -98583406 + (CA)n Simple_repeat Simple_repeat 1 54 0 181 318 0 0 chr10 47006061 47006124 -98583164 - L2 LINE L2 -6 3266 3204 352 237 140 9 chr10 47006871 47006985 -98582303 - MIR SINE MIR -74 188 60 207 100 0 0 chr10 47012348 47012378 -98576910 + (TG)n Simple_repeat Simple_repeat 2 31 0 991 239 55 28 chr10 47012991 47013449 -98575839 + MLT2B1 LTR ERVL 1 520 0 219 326 0 0 chr10 47016426 47016512 -98572776 + (TG)n Simple_repeat Simple_repeat 1 86 0 420 354 54 54 chr10 47017210 47017635 -98571653 + L1MEd LINE L1 853 1370 -1120 1759 129 31 130 chr10 47017879 47018371 -98570917 - Tigger2 DNA MER2_type 0 2718 1 2769 186 26 36 chr10 47018744 47019353 -98569935 - LTR26 LTR ERV1 0 603 1 216 0 0 0 chr10 47019409 47019433 -98569855 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 615 330 76 20 chr10 47019613 47020165 -98569123 + L1MEd LINE L1 2507 3089 -3040 701 114 24 0 chr10 47021231 47021354 -98567934 + L1MA7 LINE L1 6166 6291 0 571 323 81 19 chr10 47022233 47022555 -98566733 - L1MDa LINE L1 -2634 3906 3565 6357 94 12 13 chr10 47022558 47022652 -98566636 - L1MA2 LINE L1 0 6304 6211 2255 114 0 3 chr10 47022652 47022949 -98566339 + AluSg SINE Alu 1 296 -14 6357 94 12 13 chr10 47022949 47023829 -98565459 - L1MA2 LINE L1 -93 6211 5331 * 10519 163 14 8 chr10 47023826 47025561 -98563727 - L1M1 LINE L1 -5807 1758 14 360 227 103 67 chr10 47025567 47025761 -98563527 - L1MDa LINE L1 -2998 3542 3342 1438 285 42 10 chr10 47025787 47026306 -98562982 - L1ME3A LINE L1 -260 5910 5375 2395 111 40 24 chr10 47026317 47026694 -98562594 + MSTC LTR MaLR 1 383 -45 895 191 26 0 chr10 47026712 47026906 -98562382 - L1MDa LINE L1 -3530 3010 2812 * 1897 216 118 14 chr10 47026903 47027190 -98562098 - L1MDa LINE L1 -4000 2540 2284 2098 118 51 3 chr10 47027190 47027486 -98561802 - AluSx SINE Alu -2 310 1 1897 216 118 14 chr10 47027486 47027851 -98561437 - L1MDa LINE L1 -4256 2284 1820 2155 23 0 0 chr10 47027935 47028229 -98561059 + L1PA3 LINE L1 5897 6190 0 357 198 144 18 chr10 47028229 47028340 -98560948 - L1MDa LINE L1 -4736 1804 1680 309 175 0 0 chr10 47028346 47028403 -98560885 + MLT2B1 LTR ERVL 464 520 0 1429 265 171 8 chr10 47028409 47029016 -98560272 + L1MC4a LINE L1 6784 7489 -319 370 240 116 0 chr10 47029018 47029147 -98560141 + L1MC4 LINE L1 7759 7902 -140 761 261 60 17 chr10 47029363 47029597 -98559691 + MIR SINE MIR 18 261 -1 2530 79 35 0 chr10 47029943 47030286 -98559002 + THE1A LTR MaLR 1 355 0 276 156 0 0 chr10 47030739 47030784 -98558504 - MLT1H LTR MaLR -1 548 504 447 289 238 22 chr10 47030835 47031150 -98558138 - MLT1H LTR MaLR -42 507 125 356 344 32 26 chr10 47031469 47031812 -98557476 + L1ME3A LINE L1 4942 5286 -860 725 259 41 5 chr10 47031813 47032010 -98557278 + MER63A DNA MER1_type 1 204 -6 1163 289 51 48 chr10 47032011 47032044 -98557244 + L1ME3A LINE L1 5285 5316 -854 2155 110 21 0 chr10 47032044 47032334 -98556954 + AluSp SINE Alu 1 296 -17 1163 289 51 48 chr10 47032334 47032379 -98556909 + L1ME3A LINE L1 5316 5359 -811 2173 133 82 15 chr10 47032379 47032784 -98556504 - MSTB1 LTR MaLR 0 432 1 1163 289 51 48 chr10 47032784 47033351 -98555937 + L1ME3A LINE L1 5359 5933 -237 369 0 0 0 chr10 47033979 47034020 -98555268 + (CA)n Simple_repeat Simple_repeat 2 42 0 1144 155 14 10 chr10 47035785 47035992 -98553296 - AluJb SINE Alu -20 292 85 8271 49 9 118 chr10 47036018 47037340 -98551948 + SVA Other Other 209 1386 0 926 284 126 27 chr10 47037343 47037868 -98551420 + L1MC4a LINE L1 5324 5900 -1908 231 148 148 178 chr10 47038131 47038232 -98551056 - MLT2B1 LTR ERVL -14 506 409 802 248 165 18 chr10 47038257 47038658 -98550630 + MLT1H1 LTR MaLR 96 545 -10 899 142 131 6 chr10 47039018 47039194 -98550094 + L1P5 LINE L1 3 200 -6663 6639 116 162 9 chr10 47039194 47039727 -98549561 + L1P5 LINE L1 634 1084 -5779 2030 109 0 10 chr10 47039727 47040021 -98549267 - AluSq SINE Alu -22 291 1 6639 116 162 9 chr10 47040021 47040606 -98548682 + L1P5 LINE L1 1084 1914 -4949 1868 91 60 0 chr10 47040614 47040899 -98548389 - L1PBa LINE L1 -4434 2429 2128 * 13281 189 16 18 chr10 47040898 47043929 -98545359 + L1P5 LINE L1 3032 6043 -824 189 0 0 0 chr10 47043929 47043950 -98545338 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 13281 189 16 18 chr10 47043950 47044324 -98544964 + L1P5 LINE L1 6043 6416 -451 470 299 24 0 chr10 47044862 47044989 -98544299 + L2 LINE L2 3184 3313 0 * 786 304 121 56 chr10 47044973 47045465 -98543823 - L2 LINE L2 -7 3306 2707 2207 122 3 26 chr10 47045465 47045808 -98543480 + MER1B DNA MER1_type 3 337 0 786 304 121 56 chr10 47045808 47046126 -98543162 - L2 LINE L2 -606 2707 2411 556 239 73 76 chr10 47046264 47046565 -98542723 - L1MC4 LINE L1 -1 8041 7742 234 0 0 0 chr10 47046585 47046611 -98542677 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 4133 35 2 0 chr10 47046611 47047091 -98542197 - L1PA3 LINE L1 -13 6142 5662 2989 61 10 15 chr10 47047091 47047485 -98541803 + L1PB1 LINE L1 5716 6107 -44 24 0 0 0 chr10 47047486 47047510 -98541778 + AT_rich Low_complexity Low_complexity 1 24 0 769 265 20 0 chr10 47047986 47048186 -98541102 + MER58A DNA MER1_type 18 221 -3 1005 155 0 0 chr10 47048335 47048496 -98540792 + AluSg/x SINE Alu 134 294 -18 737 315 113 38 chr10 47048497 47049154 -98540134 + L1ME4a LINE L1 5255 5964 -157 203 138 0 0 chr10 47049154 47049183 -98540105 + (TG)n Simple_repeat Simple_repeat 2 30 0 633 270 139 37 chr10 47049248 47049707 -98539581 - MLT1J LTR MaLR -2 509 4 334 264 111 69 chr10 47049734 47049950 -98539338 + HAL1 LINE L1 1428 1652 -855 800 130 0 0 chr10 47049962 47050077 -98539211 + AluJb SINE Alu 1 115 -197 210 91 0 0 chr10 47050083 47050116 -98539172 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 1427 224 23 1 chr10 47050319 47050641 -98538647 + L1MDa LINE L1 4 456 -6087 1883 180 50 50 chr10 47050641 47051146 -98538142 - MLT1D LTR MaLR 0 505 1 1899 232 26 113 chr10 47051148 47051847 -98537441 - MLT1D-int LTR MaLR -2 1369 732 * 3403 205 103 63 chr10 47051845 47052536 -98536752 + L1MDa LINE L1 458 1120 -5420 2107 102 3 0 chr10 47052536 47052830 -98536458 + AluSq SINE Alu 1 295 -18 3403 205 103 63 chr10 47052830 47053425 -98535863 + L1MDa LINE L1 1120 1820 -4720 21 0 0 0 chr10 47053481 47053502 -98535786 + AT_rich Low_complexity Low_complexity 1 21 0 1597 165 15 11 chr10 47053518 47053790 -98535498 - MLT2B1 LTR ERVL -246 274 2 473 179 56 78 chr10 47053804 47053995 -98535293 - L1MC4 LINE L1 -1073 6820 6546 1491 196 14 7 chr10 47053996 47054282 -98535006 + LOR1b LTR ERV1 66 353 -108 388 81 203 14 chr10 47054270 47054344 -98534944 + LOR1a LTR ERV1 410 497 0 * 391 287 111 62 chr10 47054344 47055040 -98534248 - L1MCa LINE L1 -2248 4178 3449 1426 169 73 11 chr10 47055303 47055576 -98533712 + AluJo SINE Alu 3 292 -20 2288 93 0 0 chr10 47055604 47055906 -98533382 + AluSc SINE Alu 1 302 -7 304 296 74 31 chr10 47055918 47056242 -98533046 - L1MCa LINE L1 -3335 3091 2754 533 170 0 10 chr10 47056418 47056518 -98532770 + L1MB1 LINE L1 6007 6105 -63 394 143 0 0 chr10 47056518 47056581 -98532707 + AluJ/FRAM SINE Alu 226 288 -14 450 120 0 0 chr10 47056598 47056673 -98532615 + L1MB1 LINE L1 6093 6167 -1 890 232 5 0 chr10 47056711 47056918 -98532370 + HsTC2 DNA Tc2 93 300 -1598 * 2502 213 92 35 chr10 47056913 47057339 -98531949 + HsTC2 DNA Tc2 561 961 -937 1884 135 17 0 chr10 47057339 47057636 -98531652 + AluSx SINE Alu 1 302 -10 2502 213 92 35 chr10 47057636 47058080 -98531208 + HsTC2 DNA Tc2 961 1652 -246 1654 138 47 0 chr10 47058141 47058395 -98530893 - AluSg SINE Alu -24 286 21 472 258 54 84 chr10 47058400 47058719 -98530569 - L1MCa LINE L1 -3949 2477 2246 510 311 113 22 chr10 47059042 47059547 -98529741 - HAL1 LINE L1 -849 1658 1108 620 246 95 3 chr10 47059590 47059893 -98529395 - L1MC/D LINE L1 -734 5436 5335 440 184 62 9 chr10 47059893 47060011 -98529277 - L1 LINE L1 -753 5393 5264 388 324 124 28 chr10 47060055 47060629 -98528659 - L1 LINE L1 -1833 4313 3685 477 317 50 84 chr10 47060669 47060817 -98528471 - L1 LINE L1 -2502 3644 3493 2162 176 88 9 chr10 47060817 47061250 -98528038 - MLT1C LTR MaLR 0 467 1 477 317 50 84 chr10 47061250 47061670 -98527618 - L1 LINE L1 -2653 3493 3090 520 244 48 116 chr10 47061696 47062032 -98527256 - L1ME1 LINE L1 -16 6150 5838 2324 75 16 0 chr10 47062586 47062892 -98526396 - AluY SINE Alu 0 311 1 732 204 247 55 chr10 47063151 47063495 -98525793 + LTR16A1 LTR ERVL 1 410 -47 312 239 15 15 chr10 47063694 47063761 -98525527 - L2 LINE L2 0 3313 3247 216 289 0 0 chr10 47064150 47064202 -98525086 - MIR SINE MIR -116 146 95 222 365 56 0 chr10 47064205 47064331 -98524957 + L2 LINE L2 2272 2404 -910 838 263 82 11 chr10 47065326 47065680 -98523608 + L1ME4a LINE L1 5529 5907 -214 352 110 36 15 chr10 47065744 47065811 -98523477 + MER5A DNA MER1_type 4 71 -118 208 229 29 86 chr10 47071214 47071284 -98518004 - L2 LINE L2 0 3272 3207 282 29 0 0 chr10 47071656 47071691 -98517597 + (CA)n Simple_repeat Simple_repeat 2 36 0 540 339 85 21 chr10 47073759 47074134 -98515154 + L1M4 LINE L1 4943 5341 -805 219 305 0 0 chr10 47074546 47074605 -98514683 + (TG)n Simple_repeat Simple_repeat 2 60 0 2065 93 33 13 chr10 47075162 47075462 -98513826 + AluSc SINE Alu 1 306 -3 1409 254 89 0 chr10 47075644 47076003 -98513285 + MER47B DNA MER2_type 28 418 0 292 247 201 2 chr10 47079233 47079473 -98509815 - L2 LINE L2 -185 3128 2827 1174 200 92 62 chr10 47079800 47080194 -98509094 + L1MDa LINE L1 341 1047 -5493 * 5180 213 41 34 chr10 47080189 47081203 -98508085 + L1MDa LINE L1 1345 2350 -4190 2141 76 31 7 chr10 47081203 47081493 -98507795 + AluY SINE Alu 1 297 -14 5180 213 41 34 chr10 47081493 47082214 -98507074 + L1MDa LINE L1 2350 3064 -3476 2181 109 0 3 chr10 47082214 47082526 -98506762 - AluY SINE Alu 0 311 1 5180 213 41 34 chr10 47082526 47083490 -98505798 + L1MDa LINE L1 3064 4063 -2477 298 212 30 0 chr10 47083515 47083581 -98505707 + L1MDa LINE L1 4551 4618 -1922 1136 240 0 4 chr10 47083590 47083865 -98505423 + L1MD1 LINE L1 3668 3941 -2205 764 185 11 65 chr10 47083864 47084048 -98505240 + L1MB5 LINE L1 5986 6159 -15 * 4481 190 51 70 chr10 47084047 47086305 -98502983 + L1MD1 LINE L1 3908 6206 -36 342 0 0 0 chr10 47086305 47086343 -98502945 + (TG)n Simple_repeat Simple_repeat 1 38 0 2314 99 3 0 chr10 47086344 47086638 -98502650 - AluSp SINE Alu -18 295 1 4481 190 51 70 chr10 47086638 47086776 -98502512 + L1MD1 LINE L1 6205 6242 0 836 258 58 58 chr10 47086874 47087269 -98502019 - HAL1 LINE L1 -7 2500 2106 515 218 28 28 chr10 47087298 47087440 -98501848 - L2 LINE L2 -4 3309 3168 403 67 0 17 chr10 47088940 47089000 -98500288 + L1PB1 LINE L1 5913 5971 -180 368 278 97 53 chr10 47089002 47089229 -98500059 + L1MC4 LINE L1 6616 7777 -184 339 270 26 52 chr10 47089166 47089281 -98500007 - L1MC4 LINE L1 -1316 6726 6615 * 21 36 0 0 chr10 47089289 47089317 -98499971 + AT_rich Low_complexity Low_complexity 1 28 0 3642 136 5 0 chr10 47089317 47090105 -98499183 - L1P5 LINE L1 -361 5790 4999 386 258 124 6 chr10 47090231 47090409 -98498879 - L1ME LINE L1 -328 5793 5595 1577 167 0 0 chr10 47093140 47093380 -98495908 - AluJo SINE Alu -72 240 1 250 333 61 0 chr10 47094306 47094438 -98494850 - L1ME LINE L1 -816 5330 5191 447 348 34 14 chr10 47094857 47095064 -98494224 - L1ME LINE L1 -1684 4462 4252 347 379 17 6 chr10 47095294 47095468 -98493820 - L1ME LINE L1 -2688 3458 3283 426 274 105 25 chr10 47099112 47099397 -98489891 - L1ME LINE L1 -3099 3047 2740 2233 94 33 3 chr10 47099450 47099749 -98489539 - AluSp SINE Alu -5 308 1 384 315 116 32 chr10 47099801 47100017 -98489271 - L1ME LINE L1 -3641 2505 2272 350 237 12 12 chr10 47100196 47100369 -98488919 + (CA)n Simple_repeat Simple_repeat 2 174 0 324 193 17 55 chr10 47100358 47100539 -98488749 + (CATA)n Simple_repeat Simple_repeat 4 177 0 * 227 288 14 0 chr10 47100540 47100613 -98488675 + (CA)n Simple_repeat Simple_repeat 1 74 0 242 329 41 0 chr10 47102121 47102194 -98487094 + MIR SINE MIR 112 187 -75 754 172 0 15 chr10 47103872 47104006 -98485282 + FLAM_C SINE Alu 2 133 0 1743 191 0 0 chr10 47104016 47104318 -98484970 + AluJb SINE Alu 1 302 0 264 200 57 0 chr10 47105094 47105164 -98484124 + MIR SINE MIR 109 182 -80 251 292 28 51 chr10 47105950 47106118 -98483170 - MIR3 SINE MIR -65 143 2 211 255 0 0 chr10 47106680 47106731 -98482557 - L2 LINE L2 -1 3312 3262 871 292 69 3 chr10 47106731 47107063 -98482225 - MLT1A1 LTR MaLR -9 356 3 223 308 53 15 chr10 47107145 47107278 -98482010 - L2 LINE L2 -307 3006 2869 220 296 235 16 chr10 47107272 47107651 -98481637 - L2 LINE L2 -579 2735 2274 * 376 246 109 9 chr10 47108351 47108461 -98480827 - MER117 DNA MER1_type -10 187 67 267 239 26 43 chr10 47110905 47111022 -98478266 + (TCTCTG)n Simple_repeat Simple_repeat 6 120 0 267 324 9 0 chr10 47114899 47115010 -98474278 - MER117 DNA MER1_type -37 160 49 4030 181 37 45 chr10 47115032 47115707 -98473581 + L1MB4 LINE L1 4644 5323 -857 1853 166 19 3 chr10 47115707 47116014 -98473274 + AluJb SINE Alu 1 312 0 4030 181 37 45 chr10 47116014 47116872 -98472416 + L1MB4 LINE L1 5323 6179 -1 890 253 161 29 chr10 47117140 47117586 -98471702 - MLT1D LTR MaLR 0 505 1 342 388 105 14 chr10 47117698 47117974 -98471314 + L1M4 LINE L1 2111 2411 -3735 252 86 0 0 chr10 47118713 47118748 -98470540 + (CA)n Simple_repeat Simple_repeat 1 35 0 376 313 16 0 chr10 47119166 47119294 -98469994 + MIR SINE MIR 6 135 -127 1117 296 90 21 chr10 47119576 47120053 -98469235 + MLT2B2 LTR ERVL 6 515 0 230 293 41 41 chr10 47120217 47120364 -98468924 + MIR SINE MIR 1 147 -115 315 269 38 113 chr10 47124013 47124199 -98465089 + HAL1 LINE L1 2 173 -2334 271 332 52 48 chr10 47124277 47124548 -98464740 + HAL1 LINE L1 423 694 -1813 2558 199 45 7 chr10 47124619 47125100 -98464188 - L1MC3 LINE L1 0 7854 7348 2574 136 24 24 chr10 47125100 47125555 -98463733 - L1PA16 LINE L1 -7 6159 5705 2558 199 45 7 chr10 47125555 47125622 -98463666 - L1MC3 LINE L1 -506 7348 7285 248 304 26 26 chr10 47125622 47125737 -98463551 - MLT1F1 LTR MaLR -429 138 24 2259 156 31 50 chr10 47125737 47126218 -98463070 - L1MC3 LINE L1 -700 7154 6683 1275 180 79 85 chr10 47126218 47126644 -98462644 + MLT2C2 LTR ERVL 1 464 0 5810 188 57 10 chr10 47126649 47128070 -98461218 - L1MC3 LINE L1 -743 5472 5187 831 117 0 29 chr10 47128112 47128249 -98461039 - FLAM_C SINE Alu 0 133 1 1604 236 137 19 chr10 47128260 47128902 -98460386 - L1MC3 LINE L1 -2378 3837 3092 2093 146 0 10 chr10 47128902 47129197 -98460091 - AluSx SINE Alu -20 292 1 1604 236 137 19 chr10 47129197 47129308 -98459980 - L1MC3 LINE L1 -3123 3092 2995 1007 122 6 61 chr10 47129308 47129530 -98459758 - FRAM SINE Alu 0 176 1 2351 109 0 0 chr10 47129554 47129857 -98459431 + AluSc SINE Alu 1 303 -6 2245 236 35 32 chr10 47129857 47130504 -98458784 - L1MC3 LINE L1 -3242 2973 2329 2438 78 0 23 chr10 47130504 47130810 -98458478 + AluY SINE Alu 1 299 -12 216 0 0 0 chr10 47130810 47130834 -98458454 + (TA)n Simple_repeat Simple_repeat 2 25 0 2245 236 35 32 chr10 47130834 47130926 -98458362 - L1MC3 LINE L1 -3885 2330 2231 2088 140 19 16 chr10 47130929 47131251 -98458037 - MER1B DNA MER1_type 0 339 17 251 146 0 42 chr10 47131255 47131303 -98457985 + MLT1A1 LTR MaLR 68 113 -252 5354 202 120 66 chr10 47131306 47132943 -98456345 + MLT1A1-int LTR MaLR 5 1729 -6 1902 191 9 3 chr10 47133020 47133366 -98455922 + MLT1A1 LTR MaLR 16 363 -2 528 241 41 21 chr10 47133368 47133513 -98455775 - L1MC3 LINE L1 -4699 1697 1550 4604 228 20 27 chr10 47133517 47133778 -98455510 + L1M4 LINE L1 287 548 -6277 4640 164 18 30 chr10 47133778 47134692 -98454596 + MER4D LTR ERV1 1 903 0 4604 228 20 27 chr10 47134692 47135900 -98453388 + L1M4 LINE L1 548 1891 -4934 1825 171 35 0 chr10 47135900 47136187 -98453101 + AluJo SINE Alu 1 297 -15 4604 228 20 27 chr10 47136187 47136804 -98452484 + L1M4 LINE L1 1891 2511 -4314 459 0 0 0 chr10 47136806 47136857 -98452431 + (TA)n Simple_repeat Simple_repeat 2 52 0 2791 229 40 14 chr10 47136860 47137676 -98451612 + L1M4 LINE L1 2612 3449 -3195 2483 124 3 3 chr10 47137682 47138037 -98451251 + THE1A LTR MaLR 1 355 0 363 184 83 0 chr10 47138043 47138152 -98451136 + L1M4 LINE L1 3689 3806 -2838 27 29 0 0 chr10 47138167 47138201 -98451087 + AT_rich Low_complexity Low_complexity 1 34 0 9920 114 22 5 chr10 47138209 47140128 -98449160 - L1PA8A LINE L1 -463 5668 3715 1317 212 123 24 chr10 47140159 47140574 -98448714 + L1M4 LINE L1 4240 4695 -1949 1678 222 35 29 chr10 47141504 47141991 -98447297 - L1ME1 LINE L1 -5 6161 5672 1189 220 7 14 chr10 47141991 47142268 -98447020 - MER93b LTR ERV1 0 373 99 1603 157 83 43 chr10 47142269 47142569 -98446719 - AluJo SINE Alu 0 312 1 435 196 33 11 chr10 47142741 47142833 -98446455 - L1ME1 LINE L1 -491 5675 5582 1885 174 34 32 chr10 47142894 47143447 -98445841 - MLT2A2 LTR ERVL 0 554 1 773 177 14 34 chr10 47143447 47143594 -98445694 + FRAM SINE Alu 2 145 -31 1038 209 110 37 chr10 47143653 47143826 -98445462 - L1ME1 LINE L1 -611 5555 5396 2949 0 0 0 chr10 47143826 47144134 -98445154 - AluYa5 SINE Alu -3 308 1 1038 209 110 37 chr10 47144134 47144486 -98444802 - L1ME1 LINE L1 -770 5396 4986 6753 199 54 18 chr10 47144486 47145933 -98443355 - L1M4 LINE L1 -718 5466 4072 216 0 0 0 chr10 47145933 47145957 -98443331 + (GTTTG)n Simple_repeat Simple_repeat 2 25 0 2143 100 0 17 chr10 47145957 47146246 -98443042 - AluY SINE Alu -27 284 1 6753 199 54 18 chr10 47146246 47146645 -98442643 - L1M4 LINE L1 -2111 4073 3550 912 166 0 60 chr10 47146645 47146880 -98442408 + AluSp SINE Alu 1 221 -92 234 0 0 0 chr10 47147730 47147756 -98441532 + (GGAA)n Simple_repeat Simple_repeat 3 28 0 2584 179 95 100 chr10 47147759 47148401 -98440887 + L1M4 LINE L1 4855 5499 -1177 2310 100 3 10 chr10 47148401 47148701 -98440587 - AluSp SINE Alu -15 298 1 2584 179 95 100 chr10 47148701 47148774 -98440514 + L1M4 LINE L1 5499 5571 -1105 1865 117 99 7 chr10 47148774 47149056 -98440232 - AluSg1 SINE Alu 0 309 2 2584 179 95 100 chr10 47149056 47149614 -98439674 + L1M4 LINE L1 5571 6127 -549 2017 110 0 69 chr10 47149614 47149931 -98439357 - AluSx SINE Alu -13 299 5 2584 179 95 100 chr10 47149931 47150062 -98439226 + L1M4 LINE L1 6127 6257 -419 191 30 0 61 chr10 47150468 47150501 -98438787 + (CAGA)n Simple_repeat Simple_repeat 2 32 0 289 275 14 0 chr10 47151643 47151712 -98437576 + L2 LINE L2 3233 3302 -11 230 81 27 0 chr10 47151713 47151750 -98437538 + (TGGA)n Simple_repeat Simple_repeat 4 41 0 3451 57 25 11 chr10 47151767 47152205 -98437083 - MLT2A1 LTR ERVL 0 444 1 588 203 11 11 chr10 47152205 47152382 -98436906 + (TGGA)n Simple_repeat Simple_repeat 3 179 0 1418 177 83 50 chr10 47152382 47152744 -98436544 + MLT1B LTR MaLR 1 374 -16 1415 205 112 68 chr10 47153793 47154311 -98434977 - MER45B DNA AcHobo -83 957 417 233 295 74 0 chr10 47154451 47154546 -98434742 - MER45B DNA AcHobo -886 154 53 180 274 147 42 chr10 47154668 47154763 -98434525 - L2 LINE L2 -2 3270 3166 513 253 7 115 chr10 47155250 47155554 -98433734 - L1MC4a LINE L1 0 7808 7538 270 266 13 25 chr10 47155635 47155714 -98433574 + (CATATA)n Simple_repeat Simple_repeat 4 81 0 257 245 104 32 chr10 47156025 47156145 -98433143 + MIR SINE MIR 41 169 -39 255 301 188 23 chr10 47157813 47158069 -98431219 + L2 LINE L2 2453 2750 -564 1216 163 68 108 chr10 47158885 47159122 -98430166 - MLT1A1 LTR MaLR 0 365 147 894 97 22 103 chr10 47159122 47159307 -98429981 - L1MA3 LINE L1 0 6305 6136 1216 163 68 108 chr10 47159307 47159449 -98429839 - MLT1A1 LTR MaLR -218 147 1 23 0 0 0 chr10 47159485 47159508 -98429780 + AT_rich Low_complexity Low_complexity 1 23 0 243 234 0 31 chr10 47159520 47159584 -98429704 + L1M4c LINE L1 174 235 -6078 2444 83 0 19 chr10 47159810 47160123 -98429165 - AluY SINE Alu -4 307 1 4310 218 114 42 chr10 47160368 47161952 -98427336 + L1M4c LINE L1 539 2237 -4147 1242 194 25 39 chr10 47161954 47162487 -98426801 - L1M4 LINE L1 -3675 2707 2183 * 3953 164 46 12 chr10 47162484 47163244 -98426044 + L1MB3 LINE L1 5391 6176 -7 2590 234 62 27 chr10 47163573 47164316 -98424972 + L1ME1 LINE L1 5383 6151 -15 252 0 0 0 chr10 47166087 47166115 -98423173 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 552 152 0 0 chr10 47167658 47167757 -98421531 + (CA)n Simple_repeat Simple_repeat 1 99 0 707 261 207 10 chr10 47174397 47174880 -98414408 + MLT1G1 LTR MaLR 2 579 -16 1591 181 3 7 chr10 47176074 47176356 -98412932 - AluJo SINE Alu -1 311 31 4270 211 96 19 chr10 47177679 47177957 -98411331 + L1MDa LINE L1 507 762 -5778 2439 91 0 0 chr10 47177957 47178253 -98411035 + AluSg SINE Alu 1 296 -14 4270 211 96 19 chr10 47178253 47179244 -98410044 + L1MDa LINE L1 762 2108 -4432 3009 138 61 18 chr10 47179246 47179425 -98409863 + L1MD1 LINE L1 5646 5816 -426 1696 181 20 10 chr10 47179425 47179723 -98409565 - AluJb SINE Alu -11 301 1 3009 138 61 18 chr10 47179723 47180115 -98409173 + L1MD1 LINE L1 5816 6242 0 561 254 30 30 chr10 47180387 47180552 -98408736 - L1MC4 LINE L1 -521 7521 7357 285 228 93 33 chr10 47180611 47180807 -98408481 + L1ME LINE L1 5268 5469 -871 3521 229 69 41 chr10 47180820 47182083 -98407205 - L1MD3 LINE L1 -7 8035 6749 666 213 91 110 chr10 47183143 47183397 -98405891 + MIR SINE MIR 14 262 0 415 261 127 62 chr10 47183505 47183892 -98405396 - MLT1J LTR MaLR 0 511 100 180 304 43 0 chr10 47184707 47184776 -98404512 + MIR3 SINE MIR 96 167 -41 276 257 40 0 chr10 47185356 47185430 -98403858 - MIR SINE MIR -92 170 94 282 273 170 31 chr10 47185866 47186060 -98403228 + L2 LINE L2 1567 1787 -1527 375 262 128 56 chr10 47186852 47187267 -98402021 - MLT1E LTR MaLR -1 592 99 272 248 38 90 chr10 47187388 47187521 -98401767 + L2 LINE L2 3175 3300 -13 804 176 48 30 chr10 47187845 47188010 -98401278 + AluJo SINE Alu 121 288 -24 252 320 40 16 chr10 47188109 47188234 -98401054 + L1ME LINE L1 5683 5810 -352 2194 120 7 0 chr10 47189002 47189311 -98399977 - AluSx SINE Alu -1 311 1 471 305 94 33 chr10 47190484 47190974 -98398314 + MLT1G1 LTR MaLR 2 595 0 226 0 29 29 chr10 47191978 47192013 -98397275 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1184 188 50 80 chr10 47192060 47192422 -98396866 - MLT1B LTR MaLR -9 381 31 230 221 60 14 chr10 47194940 47195014 -98394274 + MIR SINE MIR 114 194 -56 447 158 0 0 chr10 47197556 47197632 -98391656 + AluSp/q SINE Alu 236 311 -2 467 219 28 17 chr10 47197632 47197810 -98391478 - L1MEc LINE L1 -2588 3627 3448 * 4140 241 80 34 chr10 47197802 47199548 -98389740 - L1MEc LINE L1 -4535 1861 36 180 309 18 0 chr10 47199569 47199624 -98389664 + L3b LINE CR1 1526 1581 -2 2011 45 86 0 chr10 47200613 47200881 -98388407 + AluY SINE Alu 1 291 -20 2002 128 28 3 chr10 47201988 47202278 -98387010 + AluSx SINE Alu 1 297 -15 2105 149 12 32 chr10 47204105 47204448 -98384840 - MER1B DNA MER1_type 0 337 2 3437 205 52 32 chr10 47205356 47205581 -98383707 + L1MB3 LINE L1 5103 5322 -861 2103 116 0 25 chr10 47205581 47205901 -98383387 + AluSx SINE Alu 1 312 0 3437 205 52 32 chr10 47205901 47206723 -98382565 + L1MB3 LINE L1 5322 6181 -2 195 146 0 0 chr10 47207262 47207303 -98381985 + (TTCA)n Simple_repeat Simple_repeat 1 41 0 347 332 85 25 chr10 47207897 47208099 -98381189 + L1MEc LINE L1 1432 1672 -904 209 324 19 28 chr10 47210836 47210944 -98378344 - MIR SINE MIR -59 149 43 504 208 40 0 chr10 47210982 47211107 -98378181 - MER45A DNA AcHobo -48 130 1 3681 163 20 9 chr10 47212304 47212649 -98376639 - L1MB3 LINE L1 -2 6181 5824 2125 136 3 0 chr10 47212649 47212958 -98376330 - AluSx SINE Alu -2 310 1 3681 163 20 9 chr10 47212958 47213268 -98376020 - L1MB3 LINE L1 -359 5824 5519 2069 87 3 17 chr10 47213465 47213801 -98375487 + AluSp SINE Alu 1 332 0 1044 307 101 10 chr10 47213803 47214343 -98374945 - L1ME2 LINE L1 -22 6142 5551 191 288 0 45 chr10 47214442 47214508 -98374780 + L2 LINE L2 341 403 -2911 23 33 0 0 chr10 47214613 47214643 -98374645 + AT_rich Low_complexity Low_complexity 1 30 0 468 179 18 101 chr10 47215951 47216119 -98373169 - LTR41 LTR ERVL -21 752 599 197 277 59 59 chr10 47216308 47216427 -98372861 - L2 LINE L2 -246 3067 2949 492 308 53 70 chr10 47216979 47217706 -98371582 - L2 LINE L2 -1 3312 2510 1528 74 10 0 chr10 47218568 47218770 -98370518 + AluSg/x SINE Alu 94 297 -15 22 35 0 0 chr10 47219698 47219727 -98369561 + GC_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr10 47219841 47219862 -98369426 + GC_rich Low_complexity Low_complexity 1 21 0 189 305 49 0 chr10 47220197 47220279 -98369009 + MIR SINE MIR 47 132 -76 336 271 121 0 chr10 47221291 47221431 -98367857 + LTR16C LTR ERVL 324 480 -11 387 0 0 0 chr10 47221800 47221843 -98367445 + (CA)n Simple_repeat Simple_repeat 1 43 0 1566 187 3 35 chr10 47221853 47222195 -98367093 - MER4D LTR ERV1 -9 894 564 226 250 16 0 chr10 47222211 47222275 -98367013 - MER4E LTR ERV1 -615 164 100 1492 124 106 36 chr10 47222303 47222577 -98366711 + AluJb SINE Alu 1 293 -19 1561 153 28 3 chr10 47222591 47222878 -98366410 - MER49 LTR ERV1 -629 294 1 412 234 38 19 chr10 47222883 47223041 -98366247 + (CA)n Simple_repeat Simple_repeat 2 162 0 413 214 11 0 chr10 47225870 47225959 -98363329 - MER53 DNA DNA -6 183 94 320 183 84 0 chr10 47228456 47228527 -98360761 + MIR SINE MIR 80 156 -106 341 283 6 35 chr10 47234020 47234193 -98355095 + (CACGC)n Simple_repeat Simple_repeat 4 171 0 1805 135 3 11 chr10 47236867 47237149 -98352139 - AluSx SINE Alu -32 280 1 293 273 167 58 chr10 47239560 47239853 -98349435 - MER102b DNA MER1_type -10 331 7 374 248 64 18 chr10 47239861 47239970 -98349318 - L2 LINE L2 -3 3269 3156 695 154 118 22 chr10 47245754 47245890 -98343398 + Tigger1 DNA MER2_type 3 151 -2267 * 1010 179 41 50 chr10 47245887 47246105 -98343183 + Tigger1 DNA MER2_type 2203 2418 0 1893 188 41 39 chr10 47247534 47247998 -98341290 - MER89 LTR ERV1 0 559 1 2502 179 61 7 chr10 47247998 47248638 -98340650 - MER89-int LTR ERV1 0 6801 6095 257 219 0 0 chr10 47248647 47248704 -98340584 + MLT1C LTR MaLR 413 459 -8 4476 196 31 82 chr10 47248712 47249467 -98339821 - MER89-int LTR ERV1 -4754 2047 1382 1309 195 36 7 chr10 47249467 47249744 -98339544 - AluJo SINE Alu -27 285 1 4476 196 31 82 chr10 47249744 47250276 -98339012 - MER89-int LTR ERV1 -5419 1382 825 897 266 104 44 chr10 47250467 47250940 -98338348 - MER89-int LTR ERV1 -6267 534 34 592 183 26 26 chr10 47250968 47251083 -98338205 - MER89 LTR ERV1 -27 532 418 713 102 0 0 chr10 47251385 47251483 -98337805 + AluJ/FLAM SINE Alu 2 99 -213 219 217 83 33 chr10 47252217 47252277 -98337011 - MIR SINE MIR -56 152 90 26 0 0 0 chr10 47252561 47252587 -98336701 + GC_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr10 47252622 47252644 -98336644 + GC_rich Low_complexity Low_complexity 1 22 0 27 29 0 0 chr10 47252745 47252779 -98336509 + GC_rich Low_complexity Low_complexity 1 34 0 1117 190 74 16 chr10 47252932 47253174 -98336114 + L1MD2 LINE L1 5482 5737 -622 1064 176 49 5 chr10 47253174 47253227 -98336061 + AluJo SINE Alu 68 117 -188 189 74 0 0 chr10 47253227 47253254 -98336034 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1064 176 49 5 chr10 47253254 47253429 -98335859 + AluJo SINE Alu 117 305 0 2332 177 68 74 chr10 47253429 47253825 -98335463 + L1MD2 LINE L1 5730 6122 -237 191 88 29 0 chr10 47253825 47253859 -98335429 + (CA)n Simple_repeat Simple_repeat 2 36 0 2332 177 68 74 chr10 47253859 47254096 -98335192 + L1MD2 LINE L1 6122 6359 0 2275 95 0 3 chr10 47254135 47254441 -98334847 - AluSg SINE Alu -5 305 1 438 203 73 8 chr10 47254477 47254600 -98334688 + L1MB3 LINE L1 4068 4198 -1948 1535 137 0 0 chr10 47254857 47255083 -98334205 + AluSx SINE Alu 62 287 -25 25 31 0 0 chr10 47255236 47255268 -98334020 + GC_rich Low_complexity Low_complexity 1 32 0 3451 177 113 35 chr10 47255286 47256208 -98333080 + L1MB3 LINE L1 5196 6183 0 273 172 0 86 chr10 47257198 47257256 -98332032 - L2 LINE L2 -74 3239 3187 1834 173 77 0 chr10 47257410 47257733 -98331555 + MER7A DNA MER2_type 1 346 0 457 237 31 0 chr10 47258547 47258644 -98330644 + U6 snRNA snRNA 4 103 -4 1975 126 3 7 chr10 47258658 47258952 -98330336 - AluJb SINE Alu -19 293 1 435 236 81 95 chr10 47258967 47259115 -98330173 + L1MD2 LINE L1 6135 6280 -79 298 132 57 0 chr10 47259460 47259513 -98329775 + Tigger3(Golem) DNA MER2_type 2893 2948 -81 1939 113 3 27 chr10 47261246 47261563 -98327725 - AluSx SINE Alu 0 310 1 1486 64 5 0 chr10 47261771 47261959 -98327329 - AluY SINE Alu -17 294 106 354 310 65 7 chr10 47262281 47262436 -98326852 + L1MEd LINE L1 3 166 -5953 272 261 2 25 chr10 47262467 47262547 -98326741 + L1ME3A LINE L1 5469 5549 -615 764 252 190 26 chr10 47262716 47263105 -98326183 + L1ME3A LINE L1 5717 6169 -1 445 172 75 0 chr10 47263228 47263321 -98325967 + L1M2a LINE L1 1 100 -7068 2260 114 0 0 chr10 47264267 47264575 -98324713 + AluSx SINE Alu 1 308 -4 245 338 0 12 chr10 47264816 47264896 -98324392 + L2 LINE L2 3235 3313 0 2245 105 0 0 chr10 47266025 47266331 -98322957 + AluSx SINE Alu 1 306 -6 265 308 60 15 chr10 47266454 47266587 -98322701 + L2 LINE L2 1278 1416 -1898 717 230 29 0 chr10 47266664 47266838 -98322450 - MER3 DNA MER1_type -26 183 5 474 324 95 108 chr10 47266854 47267891 -98321397 + L2 LINE L2 1519 2605 -709 360 218 58 11 chr10 47267911 47267998 -98321290 + L2 LINE L2 2725 2815 -499 2200 102 3 0 chr10 47269993 47270296 -98318992 - AluSg SINE Alu -6 304 1 684 189 148 18 chr10 47270589 47270758 -98318530 + AluJb SINE Alu 114 304 -8 281 252 107 29 chr10 47270994 47271097 -98318191 - MIR SINE MIR -7 255 145 873 241 66 8 chr10 47271238 47271479 -98317809 + L1ME1 LINE L1 83 337 -6072 1301 175 24 12 chr10 47271491 47271742 -98317546 + L1ME1 LINE L1 654 907 -5502 2337 217 150 77 chr10 47271743 47273276 -98316012 + L1ME1 LINE L1 1017 2653 -3753 1270 259 49 59 chr10 47273289 47273783 -98315505 + LTR53 LTR ERVL 20 508 -11 1353 209 22 0 chr10 47273878 47274146 -98315142 + AluJo SINE Alu 1 274 -38 2626 225 68 67 chr10 47274146 47274494 -98314794 + L1ME1 LINE L1 2840 3186 -3220 2749 10 0 0 chr10 47274494 47274802 -98314486 + AluYa5 SINE Alu 1 308 -3 2626 225 68 67 chr10 47274802 47274975 -98314313 + L1ME1 LINE L1 3186 3357 -3049 2010 123 3 3 chr10 47274975 47275285 -98314003 + AluSp SINE Alu 1 310 -3 2626 225 68 67 chr10 47275285 47275961 -98313327 + L1ME1 LINE L1 3357 4039 -2367 548 173 19 19 chr10 47275987 47276091 -98313197 + U13 snRNA snRNA 1 104 0 369 111 0 0 chr10 47276151 47276205 -98313083 + L1ME1 LINE L1 4050 4103 -2303 1437 166 7 58 chr10 47276213 47276521 -98312767 + AluJo SINE Alu 1 292 -20 3207 219 72 27 chr10 47276728 47277396 -98311892 + L1ME1 LINE L1 4699 5335 -1091 2004 101 28 0 chr10 47277396 47277683 -98311605 + AluSx SINE Alu 1 295 -17 3207 219 72 27 chr10 47277683 47278662 -98310626 + L1ME1 LINE L1 5335 6421 -5 24 0 0 0 chr10 47278931 47278955 -98310333 + AT_rich Low_complexity Low_complexity 1 24 0 1237 181 5 5 chr10 47278980 47279195 -98310093 + AluJo SINE Alu 6 220 -92 670 224 116 0 chr10 47279245 47279392 -98309896 + FRAM SINE Alu 1 164 -2 75 39 0 0 chr10 47279590 47279693 -98309595 + AT_rich Low_complexity Low_complexity 1 103 0 21 71 0 0 chr10 47279879 47279921 -98309367 + AT_rich Low_complexity Low_complexity 1 42 0 1380 163 150 5 chr10 47280657 47280990 -98308298 + L1MC4a LINE L1 5215 5578 -606 1030 238 129 70 chr10 47281045 47281586 -98307702 + L1MC5 LINE L1 6414 7057 -904 2085 110 0 3 chr10 47281586 47281887 -98307401 + AluY SINE Alu 1 300 -11 1030 238 129 70 chr10 47281887 47282186 -98307102 + L1MC5 LINE L1 7057 7337 -624 712 178 86 0 chr10 47282203 47282366 -98306922 - MER3 DNA MER1_type -23 186 10 332 230 103 52 chr10 47282376 47282550 -98306738 + L1MC5 LINE L1 7343 7525 -436 190 301 96 67 chr10 47282888 47283011 -98306277 - L2 LINE L2 -247 3066 2933 1582 173 17 13 chr10 47283011 47283311 -98305977 + AluJb SINE Alu 6 306 -6 190 301 96 67 chr10 47283311 47283396 -98305892 - L2 LINE L2 -380 2933 2852 1237 246 78 8 chr10 47286282 47286677 -98302611 + L1MC4 LINE L1 6821 7243 -799 1871 146 10 7 chr10 47286792 47287100 -98302188 + AluSx SINE Alu 1 309 -3 24 32 0 0 chr10 47289404 47289435 -98299853 + AT_rich Low_complexity Low_complexity 1 31 0 1651 165 14 3 chr10 47290154 47290445 -98298843 - AluSx SINE Alu -18 294 1 1087 197 45 0 chr10 47290750 47290948 -98298340 + MER58A DNA MER1_type 2 208 -16 417 252 124 52 chr10 47291990 47292186 -98297102 + L1MC4a LINE L1 5750 5960 -161 1702 134 67 10 chr10 47292347 47292661 -98296627 + L1MA4 LINE L1 5968 6299 -1 294 281 84 42 chr10 47293287 47293454 -98295834 + MIR SINE MIR 88 261 -1 1510 147 42 62 chr10 47294289 47294595 -98294693 + AluJb SINE Alu 1 300 -12 571 277 140 30 chr10 47295871 47296106 -98293182 + MIR SINE MIR 2 262 0 551 241 145 0 chr10 47296916 47297082 -98292206 + MER3 DNA MER1_type 20 209 0 279 222 42 14 chr10 47297490 47297562 -98291726 - L2 LINE L2 0 3313 3240 258 318 68 53 chr10 47297712 47297844 -98291444 + MIR SINE MIR 4 116 -92 1487 129 10 61 chr10 47298696 47299007 -98290281 + AluJo SINE Alu 1 295 -17 2434 318 95 47 chr10 47299489 47300667 -98288621 + L2 LINE L2 609 1843 -1471 515 272 40 17 chr10 47300680 47300853 -98288435 + L2 LINE L2 2046 2222 -1092 2573 124 70 5 chr10 47300860 47301262 -98288026 + MSTA LTR MaLR 1 428 0 1262 234 286 15 chr10 47301262 47301860 -98287428 + LTR41 LTR ERVL 8 767 -6 1688 249 44 24 chr10 47301864 47302033 -98287255 + L2 LINE L2 2210 2374 -940 2603 14 0 0 chr10 47302033 47302329 -98286959 - AluYa5 SINE Alu -15 296 1 1688 249 44 24 chr10 47302329 47302654 -98286634 + L2 LINE L2 2374 2714 -600 717 213 43 7 chr10 47302816 47302957 -98286331 + AluSg/x SINE Alu 132 277 -33 772 145 0 0 chr10 47303017 47303141 -98286147 + Tigger2 DNA MER2_type 873 996 -1722 1410 199 49 66 chr10 47303149 47303176 -98286112 - MER49 LTR ERV1 -10 913 887 1502 158 8 15 chr10 47303176 47303435 -98285853 - AluJb SINE Alu -55 257 1 1410 199 49 66 chr10 47303435 47303446 -98285842 - MER49 LTR ERV1 -36 887 877 856 35 26 0 chr10 47303446 47303561 -98285727 + (TTTC)n Simple_repeat Simple_repeat 3 120 0 1809 132 0 18 chr10 47303565 47303845 -98285443 - AluSx SINE Alu -32 280 6 1410 199 49 66 chr10 47303845 47304207 -98285081 - MER49 LTR ERV1 -49 874 514 * 5084 122 82 18 chr10 47304182 47304972 -98284316 + Tigger2 DNA MER2_type 1814 2664 -54 1882 130 0 13 chr10 47304972 47305271 -98284017 - AluSg SINE Alu -15 295 1 5084 122 82 18 chr10 47305271 47305330 -98283958 + Tigger2 DNA MER2_type 2664 2718 0 374 272 125 15 chr10 47305334 47305470 -98283818 - MIR SINE MIR -70 192 42 671 151 118 0 chr10 47305730 47305849 -98283439 + FLAM_C SINE Alu 1 133 0 241 284 136 58 chr10 47306111 47306582 -98282706 + L2 LINE L2 2554 3064 -208 515 141 148 16 chr10 47306585 47306713 -98282575 + MER3 DNA MER1_type 41 185 -24 919 188 56 39 chr10 47306720 47306845 -98282443 + MER3 DNA MER1_type 2268 2401 -223 2059 101 0 7 chr10 47306845 47307157 -98282131 + AluSq SINE Alu 1 310 0 919 188 56 39 chr10 47307157 47307264 -98282024 + MER3 DNA MER1_type 2401 2505 -119 308 65 0 43 chr10 47307262 47307308 -98281980 - Alu SINE Alu -10 292 249 * 2361 120 11 22 chr10 47308132 47308499 -98280789 - THE1B LTR MaLR -1 363 1 251 65 0 0 chr10 47309131 47309162 -98280126 - MER70A LTR ERVL -152 320 290 709 220 58 0 chr10 47309176 47309349 -98279939 - MER5A DNA MER1_type -3 186 4 7784 198 106 22 chr10 47309353 47310972 -98278316 - MER52A LTR ERV1 0 1755 1 2341 191 10 17 chr10 47311163 47311211 -98278077 + MER70A LTR ERVL 1 48 -424 2018 121 3 7 chr10 47311211 47311516 -98277772 - AluSx SINE Alu -8 304 1 2341 191 10 17 chr10 47311516 47311871 -98277417 + MER70A LTR ERVL 48 401 -71 2855 81 128 0 chr10 47313112 47313543 -98275745 - LTR19A LTR ERV1 0 486 1 2207 73 0 3 chr10 47313755 47314044 -98275244 + AluSc SINE Alu 22 309 0 1747 156 6 16 chr10 47314406 47314720 -98274568 - AluJo SINE Alu -1 311 1 2074 189 116 34 chr10 47314723 47315320 -98273968 - L1MDa LINE L1 -4542 1998 1353 2234 194 47 6 chr10 47315322 47315831 -98273457 - L1MC2 LINE L1 -1 6343 5814 557 169 127 8 chr10 47315831 47315949 -98273339 - AluJb SINE Alu -11 301 170 922 8 23 16 chr10 47315949 47316078 -98273210 + (TTCTC)n Simple_repeat Simple_repeat 4 133 0 2079 104 37 0 chr10 47316078 47316403 -98272885 - AluSg SINE Alu 0 336 1 3167 243 49 22 chr10 47316403 47316619 -98272669 - L1MC2 LINE L1 -813 5333 5124 1644 177 3 3 chr10 47316619 47316913 -98272375 - AluSx SINE Alu -18 294 1 3167 243 49 22 chr10 47316913 47316981 -98272307 - L1MC2 LINE L1 -1022 5124 5059 2134 43 0 22 chr10 47316981 47317258 -98272030 - L1PA6 LINE L1 -1 6153 5883 3167 243 49 22 chr10 47317258 47317978 -98271310 - L1MC2 LINE L1 -1087 5059 4301 2246 116 129 11 chr10 47317982 47318361 -98270927 + MSTA LTR MaLR 5 428 0 848 107 0 0 chr10 47318361 47318483 -98270805 + MSTA-int LTR MaLR 1 122 -1529 1411 118 0 48 chr10 47318483 47318711 -98270577 + AluY SINE Alu 1 217 -94 2649 180 78 8 chr10 47318711 47319354 -98269934 - L1 LINE L1 -2042 4104 3417 6550 139 23 1 chr10 47319354 47320598 -98268690 + L1MA3 LINE L1 5033 6305 0 412 213 23 89 chr10 47320596 47320865 -98268423 + L1M3 LINE L1 689 5493 -690 * 390 286 38 30 chr10 47320916 47321049 -98268239 + MIR SINE MIR 20 153 -55 1266 91 11 6 chr10 47322531 47322706 -98266582 + PABL_B LTR ERV1 286 461 -206 2017 154 41 11 chr10 47322801 47323165 -98266123 - THE1C LTR MaLR 0 375 1 762 229 23 6 chr10 47323224 47323399 -98265889 + MER45A DNA AcHobo 1 178 0 189 281 53 0 chr10 47324744 47324801 -98264487 - L2 LINE L2 -13 3300 3241 608 239 0 8 chr10 47325198 47325332 -98263956 + AluJo SINE Alu 2 134 -178 225 282 0 0 chr10 47326194 47326272 -98263016 + (TG)n Simple_repeat Simple_repeat 2 79 0 1204 115 108 101 chr10 47329389 47329675 -98259613 + AluJb SINE Alu 1 288 -14 2208 97 0 3 chr10 47329912 47330223 -98259065 + AluSq SINE Alu 1 310 -3 2198 95 3 0 chr10 47332053 47332348 -98256940 + AluSq SINE Alu 2 297 -16 328 222 111 11 chr10 47332631 47332721 -98256567 - MIR3 SINE MIR -19 189 91 274 313 9 0 chr10 47333558 47333673 -98255615 + L1ME2 LINE L1 6049 6164 0 31 26 0 0 chr10 47333956 47333994 -98255294 + AT_rich Low_complexity Low_complexity 1 38 0 1932 112 0 24 chr10 47334111 47334398 -98254890 - AluSg1 SINE Alu -29 280 1 352 43 0 0 chr10 47334408 47334455 -98254833 - AluY SINE Alu 0 308 262 968 154 0 0 chr10 47335001 47335144 -98254144 + FLAM_C SINE Alu 1 143 0 451 76 0 0 chr10 47335324 47335390 -98253898 + MER41B LTR ERV1 482 547 -88 1074 246 18 33 chr10 47335404 47335734 -98253554 + L1MC4 LINE L1 7242 7566 -476 1276 205 3 35 chr10 47335739 47335855 -98253433 + AluJo SINE Alu 28 146 -166 2360 57 0 0 chr10 47335855 47336166 -98253122 + AluY SINE Alu 1 311 0 1276 205 3 35 chr10 47336166 47336336 -98252952 + AluJo SINE Alu 146 306 -6 705 164 9 0 chr10 47336402 47336518 -98252770 - Tigger1 DNA MER2_type 0 2418 2302 1472 148 9 105 chr10 47336518 47336850 -98252438 + AluSx SINE Alu 1 300 -12 2136 111 0 0 chr10 47336850 47337130 -98252158 + AluSg1 SINE Alu 1 280 -29 29 0 0 0 chr10 47337247 47337276 -98252012 + AT_rich Low_complexity Low_complexity 1 29 0 877 279 34 20 chr10 47337296 47337590 -98251698 + L1MC4 LINE L1 6716 7013 -1029 1475 210 3 32 chr10 47337597 47337907 -98251381 + AluJo SINE Alu 1 301 -11 285 29 0 0 chr10 47337907 47337941 -98251347 + (ATG)n Simple_repeat Simple_repeat 3 36 0 392 225 12 0 chr10 47338058 47338138 -98251150 - Tigger7 DNA MER2_type 0 2487 2407 * 2868 221 33 2 chr10 47338132 47338703 -98250585 - Tigger7 DNA MER2_type -143 590 2 278 229 136 7 chr10 47338704 47338844 -98250444 + L1ME LINE L1 753 910 -5160 2264 114 0 3 chr10 47338901 47339200 -98250088 + AluY SINE Alu 1 298 -13 674 257 34 10 chr10 47339296 47339502 -98249786 + L1MC5 LINE L1 7016 7226 -735 255 283 26 44 chr10 47339511 47339624 -98249664 - MLT2E LTR ERVL -13 615 505 5020 39 11 15 chr10 47340189 47341228 -98248060 + MER11A LTR ERVK 1 1266 0 609 265 175 26 chr10 47341276 47341751 -98247537 + L2 LINE L2 2755 3313 0 380 326 90 21 chr10 47342649 47342882 -98246406 + MIR SINE MIR 14 262 0 262 327 9 18 chr10 47343480 47343590 -98245698 - MER5B DNA MER1_type -69 109 1 1936 146 3 10 chr10 47343603 47343905 -98245383 - AluJb SINE Alu -12 300 1 218 235 0 0 chr10 47344345 47344396 -98244892 - L2 LINE L2 -73 3240 3190 1351 159 52 17 chr10 47346514 47346747 -98242541 - AluJo SINE Alu -15 297 57 29 0 0 0 chr10 47347199 47347228 -98242060 + AT_rich Low_complexity Low_complexity 1 29 0 1833 178 0 3 chr10 47347845 47348148 -98241140 - AluJb SINE Alu -6 306 5 25 53 0 18 chr10 47348152 47348189 -98241099 + AT_rich Low_complexity Low_complexity 1 38 -18 1993 148 36 46 chr10 47348189 47348582 -98240706 - L1MA8 LINE L1 -6 6285 5897 25 53 0 18 chr10 47348582 47348601 -98240687 + AT_rich Low_complexity Low_complexity 38 56 0 852 167 13 0 chr10 47348883 47349033 -98240255 + L1MB2 LINE L1 5962 6113 -58 2224 92 3 7 chr10 47349046 47349339 -98239949 - AluSc SINE Alu -17 292 1 2111 105 7 0 chr10 47349404 47349699 -98239589 - AluSg SINE Alu -13 297 1 1688 181 3 17 chr10 47350263 47350556 -98238732 - AluSx SINE Alu -21 291 3 269 267 147 40 chr10 47350586 47350736 -98238552 + L2 LINE L2 3123 3288 -25 2310 92 0 20 chr10 47350890 47351194 -98238094 + AluSc SINE Alu 1 298 -11 2223 146 123 5 chr10 47351385 47351768 -98237520 - MSTA LTR MaLR 0 428 1 257 266 40 87 chr10 47351778 47351951 -98237337 + MIR SINE MIR 26 147 -61 279 140 0 0 chr10 47353242 47353292 -98235996 + (CA)n Simple_repeat Simple_repeat 1 50 0 2088 128 0 26 chr10 47354362 47354667 -98234621 + AluSq SINE Alu 1 297 -16 382 207 126 45 chr10 47355808 47355919 -98233369 + MIR3 SINE MIR 83 202 -6 810 233 14 42 chr10 47356903 47357118 -98232170 - MER3 DNA MER1_type 0 209 1 877 214 35 0 chr10 47357126 47357299 -98231989 - MER5A DNA MER1_type 0 189 11 1770 174 34 0 chr10 47360585 47360878 -98228410 + AluJb SINE Alu 1 303 -9 1624 156 12 0 chr10 47361935 47362185 -98227103 + AluSx SINE Alu 44 296 -16 1111 156 262 29 chr10 47362411 47362655 -98226633 + AluJo SINE Alu 1 301 -1 482 135 42 52 chr10 47363343 47363439 -98225849 + L1P LINE L1 4500 4594 -1552 637 125 86 78 chr10 47363598 47363726 -98225562 + FLAM_C SINE Alu 4 132 -1 210 162 0 27 chr10 47364841 47364878 -98224410 + MIR SINE MIR 9 44 -218 2198 45 0 19 chr10 47364888 47365152 -98224136 - L1PA5 LINE L1 -1 6153 5895 3738 16 9 0 chr10 47365152 47365576 -98223712 + L1P LINE L1 4010 4437 -1709 306 253 22 33 chr10 47365824 47365915 -98223373 - L1MC4 LINE L1 -1339 6703 6614 1120 150 0 0 chr10 47365959 47366126 -98223162 + L1PB3 LINE L1 5964 6130 -24 1155 290 130 33 chr10 47366157 47367048 -98222240 + L2 LINE L2 2334 3301 -12 26 30 0 0 chr10 47368320 47368353 -98220935 + AT_rich Low_complexity Low_complexity 1 33 0 240 250 0 0 chr10 47368772 47368820 -98220468 + MIR3 SINE MIR 112 159 -49 2311 115 3 0 chr10 47369345 47369657 -98219631 - AluSp SINE Alu 0 313 1 1779 145 0 28 chr10 47370352 47370663 -98218625 - AluJb SINE Alu 0 303 1 535 291 60 28 chr10 47371176 47371418 -98217870 - MIR SINE MIR -12 250 8 1633 43 0 0 chr10 47372736 47372921 -98216367 + L1PA6 LINE L1 5968 6152 -2 201 94 0 0 chr10 47372952 47372984 -98216304 + (CA)n Simple_repeat Simple_repeat 2 33 0 1904 169 0 0 chr10 47373250 47373545 -98215743 - AluSx SINE Alu -17 295 1 187 331 92 8 chr10 47374031 47374161 -98215127 - L2 LINE L2 -2473 841 701 1186 115 6 0 chr10 47376386 47376551 -98212737 - L1PA13 LINE L1 -5 6158 5993 3076 173 9 7 chr10 47376553 47377098 -98212190 + L1P LINE L1 4500 5045 -1101 22 0 0 0 chr10 47377192 47377214 -98212074 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr10 47377273 47377294 -98211994 + AT_rich Low_complexity Low_complexity 1 21 0 1796 164 49 24 chr10 47377397 47377726 -98211562 + MER44D DNA MER2_type 1 607 -2 233 56 0 28 chr10 47378583 47378619 -98210669 + (TTTC)n Simple_repeat Simple_repeat 3 37 0 396 239 156 44 chr10 47379630 47379810 -98209478 - L2 LINE L2 0 3313 3114 402 140 0 0 chr10 47380007 47380064 -98209224 - AluJ/FLAM SINE Alu -255 57 1 2240 112 0 0 chr10 47380075 47380369 -98208919 - AluSg SINE Alu -16 294 1 1511 272 109 24 chr10 47381456 47381621 -98207667 + L2 LINE L2 2367 2517 -796 2904 46 6 9 chr10 47381621 47381968 -98207320 + L1PA4 LINE L1 5810 6155 0 1511 272 109 24 chr10 47381968 47382677 -98206611 + L2 LINE L2 2517 3313 0 23 33 0 0 chr10 47383190 47383220 -98206068 + AT_rich Low_complexity Low_complexity 1 30 0 1465 292 81 18 chr10 47383473 47384192 -98205096 - HAL1 LINE L1 -125 2382 1619 26 64 0 0 chr10 47384200 47384247 -98205041 + AT_rich Low_complexity Low_complexity 1 47 0 528 292 46 31 chr10 47384254 47384449 -98204839 - HAL1 LINE L1 -1530 977 780 703 148 28 28 chr10 47384743 47384979 -98204309 + GA-rich Low_complexity Low_complexity 1 236 0 346 352 57 0 chr10 47385555 47385714 -98203574 + MIR SINE MIR 25 192 -70 25 31 0 0 chr10 47385832 47385864 -98203424 + AT_rich Low_complexity Low_complexity 1 32 0 2107 107 3 27 chr10 47386250 47386572 -98202716 + AluSq SINE Alu 2 313 0 1838 164 0 3 chr10 47388525 47388812 -98200476 - AluJo SINE Alu -26 286 1 2345 97 0 0 chr10 47389534 47389832 -98199456 + AluY SINE Alu 1 298 -13 2221 87 0 17 chr10 47390025 47390325 -98198963 - AluSg SINE Alu -15 295 1 855 57 0 0 chr10 47390352 47390457 -98198831 + L1PA8 LINE L1 5764 5868 -304 1753 126 90 4 chr10 47390574 47390852 -98198436 - AluSg SINE Alu -8 302 1 574 295 53 16 chr10 47391246 47391626 -98197662 + HSREP522 Satellite telomeric 7 400 -104 204 40 0 0 chr10 47392670 47392695 -98196593 + (TTG)n Simple_repeat Simple_repeat 3 27 0 220 314 8 16 chr10 47392779 47392903 -98196385 + CT-rich Low_complexity Low_complexity 1 123 0 1550 189 31 10 chr10 47394080 47394371 -98194917 - AluSx SINE Alu -15 297 1 644 203 141 0 chr10 47395044 47395207 -98194081 + LOR1b LTR ERV1 1 186 -275 1140 204 47 0 chr10 47395226 47395437 -98193851 + LOR1a LTR ERV1 277 497 0 22 0 0 0 chr10 47396608 47396630 -98192658 + AT_rich Low_complexity Low_complexity 1 22 0 2103 130 0 3 chr10 47396918 47397211 -98192077 - AluSc SINE Alu -17 292 1 3011 198 36 33 chr10 47397960 47398319 -98190969 - L1MB3 LINE L1 -1 6182 5819 761 213 0 0 chr10 47398319 47398446 -98190842 - FLAM_C SINE Alu -5 128 2 3011 198 36 33 chr10 47398446 47398787 -98190501 - L1MB3 LINE L1 -364 5819 5480 2925 210 38 53 chr10 47399653 47399885 -98189403 - MER21B LTR ERV1 -123 740 506 1696 157 28 11 chr10 47399885 47400172 -98189116 - AluJo SINE Alu -11 301 10 2925 210 38 53 chr10 47400172 47400255 -98189033 - MER21B LTR ERV1 -357 506 423 1678 182 17 17 chr10 47400255 47400551 -98188737 + AluJb SINE Alu 14 309 -3 2925 210 38 53 chr10 47400551 47400967 -98188321 - MER21B LTR ERV1 -440 423 19 258 247 11 101 chr10 47400974 47401063 -98188225 - MER21B LTR ERV1 -767 96 16 1376 205 59 10 chr10 47401063 47401351 -98187937 - AluJo SINE Alu -10 302 1 604 172 52 0 chr10 47401378 47401494 -98187794 - AluSq/x SINE Alu -180 133 12 1544 183 25 61 chr10 47401500 47401861 -98187427 + MLT1D LTR MaLR 150 497 -8 1260 208 62 22 chr10 47401875 47402149 -98187139 + AluJb SINE Alu 5 289 -13 923 257 84 26 chr10 47402155 47402587 -98186701 - L2 LINE L2 -218 3095 2557 2242 113 0 3 chr10 47402587 47402898 -98186390 - AluSg SINE Alu 0 310 1 923 257 84 26 chr10 47402898 47402917 -98186371 - L2 LINE L2 -756 2557 2541 858 219 0 57 chr10 47403013 47403241 -98186047 + AluJo SINE Alu 6 220 -92 343 200 11 95 chr10 47403241 47403336 -98185952 + AluJo SINE Alu 86 172 -130 1303 196 4 32 chr10 47403667 47403948 -98185340 - AluJo SINE Alu -39 273 1 2159 122 0 10 chr10 47403952 47404256 -98185032 - AluSx SINE Alu -11 301 1 22 0 0 0 chr10 47404257 47404279 -98185009 + AT_rich Low_complexity Low_complexity 1 22 0 1261 236 7 7 chr10 47404329 47404609 -98184679 + AluJb SINE Alu 1 280 -32 280 167 28 0 chr10 47404609 47404681 -98184607 + GA-rich Low_complexity Low_complexity 1 74 0 2112 200 42 106 chr10 47404681 47405243 -98184045 - L1MB8 LINE L1 -63 6115 5600 688 186 0 47 chr10 47405243 47405372 -98183916 + FLAM_C SINE Alu 2 124 -9 2112 200 42 106 chr10 47405372 47405469 -98183819 - L1MB8 LINE L1 -578 5600 5498 1569 193 27 7 chr10 47405471 47405767 -98183521 - AluJb SINE Alu -10 302 1 525 152 0 0 chr10 47406035 47406127 -98183161 - L1PB1 LINE L1 0 6151 6060 192 125 0 0 chr10 47406424 47406456 -98182832 + (TTA)n Simple_repeat Simple_repeat 3 34 0 1960 130 7 0 chr10 47406456 47406733 -98182555 - AluSx SINE Alu -33 279 1 1053 152 104 24 chr10 47407791 47408002 -98181286 - MER6A DNA MER2_type -3 602 375 2012 131 0 3 chr10 47408021 47408304 -98180984 + AluSx SINE Alu 1 282 -30 1794 146 7 32 chr10 47408559 47408868 -98180420 - AluSx SINE Alu -11 301 1 231 266 0 25 chr10 47408930 47409009 -98180279 + LTR43 LTR ERV1 249 325 -277 1665 202 67 30 chr10 47409199 47409340 -98179948 - MER6A DNA MER2_type -491 374 240 330 26 0 0 chr10 47409340 47409379 -98179909 + (CA)n Simple_repeat Simple_repeat 2 40 0 1665 202 67 30 chr10 47409379 47409598 -98179690 - MER6A DNA MER2_type -625 240 1 1900 251 22 34 chr10 47410451 47410948 -98178340 - LTR42 LTR ERVL -3 492 2 561 259 18 27 chr10 47410954 47411174 -98178114 - L1M4 LINE L1 -1396 4750 4533 769 164 0 30 chr10 47411183 47411317 -98177971 - L1MA2 LINE L1 -19 6285 6156 493 262 68 16 chr10 47411316 47411568 -98177720 - L1M4 LINE L1 -1617 4529 4265 * 44990 40 1 4 chr10 47411637 47417810 -98171478 - L1PA4 LINE L1 -1 6154 3 2667 237 66 41 chr10 47418485 47418648 -98170640 + L1MA9 LINE L1 4251 4408 -1904 282 77 0 0 chr10 47418648 47418687 -98170601 - MADE1 DNA Mariner -41 39 1 2667 237 66 41 chr10 47418687 47419070 -98170218 + L1MA9 LINE L1 4408 4780 -1532 312 83 0 0 chr10 47419070 47419118 -98170170 + (TA)n Simple_repeat Simple_repeat 2 49 0 2667 237 66 41 chr10 47419118 47420032 -98169256 + L1MA9 LINE L1 4780 5786 -526 1283 223 45 0 chr10 47420032 47420279 -98169009 + AluJo SINE Alu 1 258 -54 207 0 0 0 chr10 47420287 47420310 -98168978 + (CAA)n Simple_repeat Simple_repeat 2 24 0 264 224 0 0 chr10 47420318 47420385 -98168903 + (TATATG)n Simple_repeat Simple_repeat 6 72 0 1170 211 33 11 chr10 47420402 47420672 -98168616 + L1MA9 LINE L1 5820 6095 -217 26 0 0 0 chr10 47421684 47421710 -98167578 + AT_rich Low_complexity Low_complexity 1 26 0 199 0 65 0 chr10 47422288 47422319 -98166969 + (TA)n Simple_repeat Simple_repeat 2 34 0 467 231 51 0 chr10 47422825 47422942 -98166346 - L1MCa LINE L1 -5731 695 573 1662 259 35 7 chr10 47423001 47423460 -98165828 - L1MCa LINE L1 -5821 605 134 1999 129 14 0 chr10 47423471 47423757 -98165531 - AluSx SINE Alu -22 290 1 3635 232 39 10 chr10 47423762 47424238 -98165050 - L1MA6 LINE L1 0 6300 5839 189 0 0 0 chr10 47424238 47424259 -98165029 + (TG)n Simple_repeat Simple_repeat 2 22 0 3635 232 39 10 chr10 47424259 47425536 -98163752 - L1MA6 LINE L1 -461 5839 4497 709 211 72 11 chr10 47425538 47425718 -98163570 + L1PB4 LINE L1 5966 6156 0 506 240 51 90 chr10 47425809 47426110 -98163178 + MLT2B1 LTR ERVL 116 470 -40 189 0 0 0 chr10 47426111 47426132 -98163156 + (TG)n Simple_repeat Simple_repeat 2 22 0 269 294 0 0 chr10 47426132 47426200 -98163088 + (CA)n Simple_repeat Simple_repeat 2 69 0 2291 106 3 0 chr10 47426985 47427278 -98162010 - AluSp SINE Alu -17 296 3 1900 155 3 3 chr10 47427283 47427579 -98161709 - AluSq SINE Alu -17 296 1 1549 126 0 0 chr10 47427743 47427957 -98161331 + AluSc SINE Alu 1 214 -95 481 241 63 85 chr10 47427957 47428395 -98160893 - LTR15 LTR ERV1 0 493 112 15744 267 29 47 chr10 47428483 47433835 -98155453 - HERV15 LTR ERV1 -3 8732 3475 4529 263 39 52 chr10 47433844 47437350 -98151938 - HERV15 LTR ERV1 -5200 3535 1 361 239 60 89 chr10 47437373 47437742 -98151546 - LTR15 LTR ERV1 -24 469 112 606 110 0 0 chr10 47437868 47437950 -98151338 + AluSc SINE Alu 211 292 -17 517 162 77 8 chr10 47437961 47438078 -98151210 - L1MB7 LINE L1 -19 6165 6041 422 307 49 18 chr10 47438222 47438447 -98150841 + LTR50 LTR ERVL 436 667 -128 5371 173 20 18 chr10 47438630 47438884 -98150404 + L1MA5 LINE L1 4865 5117 -1183 1825 134 57 33 chr10 47438884 47439183 -98150105 + AluSc SINE Alu 1 306 -3 1935 159 3 0 chr10 47439192 47439494 -98149794 + AluJb SINE Alu 1 303 -9 5371 173 20 18 chr10 47439494 47440661 -98148627 + L1MA5 LINE L1 5124 6300 0 2083 105 43 23 chr10 47440750 47441054 -98148234 + AluSp SINE Alu 1 310 -3 2068 181 99 31 chr10 47441072 47441557 -98147731 + MLT2B1 LTR ERVL 3 520 0 239 272 23 0 chr10 47441647 47441749 -98147539 + L1ME1 LINE L1 5709 5812 -430 1453 191 56 33 chr10 47441749 47442199 -98147089 + LTR10B LTR ERV1 1 547 0 1106 222 38 26 chr10 47442199 47442541 -98146747 + L1ME1 LINE L1 5806 6151 -15 2266 115 0 0 chr10 47442596 47442901 -98146387 - AluSc SINE Alu -4 305 1 1606 173 27 20 chr10 47443030 47443325 -98145963 - AluJb SINE Alu -15 297 1 1938 118 37 0 chr10 47444975 47445271 -98144017 + AluSp SINE Alu 1 307 -6 218 291 81 35 chr10 47445344 47445430 -98143858 - MIR3 SINE MIR -105 103 14 1813 129 10 29 chr10 47446076 47446387 -98142901 - AluSx SINE Alu -7 305 1 21 0 0 0 chr10 47446691 47446712 -98142576 + AT_rich Low_complexity Low_complexity 1 21 0 2360 93 0 0 chr10 47446777 47447078 -98142210 - AluSc SINE Alu -8 301 1 2086 106 4 0 chr10 47447100 47447374 -98141914 - AluSg SINE Alu -12 298 24 418 196 74 128 chr10 47447569 47447670 -98141618 + MER58B DNA MER1_type 201 293 -2127 1921 140 27 0 chr10 47447670 47447962 -98141326 - AluSx SINE Alu -12 300 1 418 196 74 128 chr10 47447962 47448008 -98141280 + MER58B DNA MER1_type 293 340 -1 278 257 129 30 chr10 47448015 47448318 -98140970 - L1M4 LINE L1 -1007 5139 4807 260 263 105 9 chr10 47448400 47448514 -98140774 - L1M4 LINE L1 -1465 4681 4557 1906 138 39 7 chr10 47448521 47448804 -98140484 - AluSq SINE Alu -21 292 1 2266 94 0 7 chr10 47448942 47449241 -98140047 - AluSq SINE Alu -16 297 1 2195 118 23 0 chr10 47451428 47451733 -98137555 + AluSx SINE Alu 1 312 0 584 339 85 3 chr10 47451847 47452314 -98136974 - L2 LINE L2 -258 3055 2541 2667 220 144 8 chr10 47452329 47453310 -98135978 + L1MDa LINE L1 1496 2609 -3931 4331 117 39 15 chr10 47453325 47454042 -98135246 - L1MA2 LINE L1 0 6304 5571 703 181 6 19 chr10 47454042 47454202 -98135086 - L1M1 LINE L1 -7389 176 19 4896 241 56 61 chr10 47454243 47454611 -98134677 + L1MDa LINE L1 2658 3026 -3514 2001 167 3 0 chr10 47454611 47454910 -98134378 + AluSx SINE Alu 1 300 -12 4896 241 56 61 chr10 47454910 47455623 -98133665 + L1MDa LINE L1 3026 3741 -2799 2187 120 0 3 chr10 47455623 47455924 -98133364 + AluSx SINE Alu 1 300 -12 4896 241 56 61 chr10 47455924 47456191 -98133097 + L1MDa LINE L1 3741 4008 -2532 368 20 0 20 chr10 47456191 47456241 -98133047 + (TTTA)n Simple_repeat Simple_repeat 1 49 0 2070 126 0 0 chr10 47456241 47456519 -98132769 - AluSg SINE Alu -32 278 1 4896 241 56 61 chr10 47456519 47457154 -98132134 + L1MDa LINE L1 4007 4644 -1896 2201 114 23 0 chr10 47457154 47457460 -98131828 + AluSp SINE Alu 1 313 0 4896 241 56 61 chr10 47457460 47457865 -98131423 + L1MDa LINE L1 4644 5049 -1491 207 0 0 0 chr10 47457865 47457888 -98131400 + (TA)n Simple_repeat Simple_repeat 2 24 0 4896 241 56 61 chr10 47457888 47457980 -98131308 + L1MDa LINE L1 5049 5140 -1400 2739 174 66 2 chr10 47457980 47458497 -98130791 + MER44D DNA MER2_type 1 605 0 4896 241 56 61 chr10 47458497 47458616 -98130672 + L1MDa LINE L1 5140 5252 -1288 1364 197 43 48 chr10 47458616 47458992 -98130296 + MLT1A2 LTR MaLR 1 374 0 4896 241 56 61 chr10 47458992 47459059 -98130229 + L1MDa LINE L1 5252 5318 -1222 2019 202 103 9 chr10 47459075 47459630 -98129658 - L1MB4 LINE L1 -2 6676 6070 2075 115 10 0 chr10 47459653 47459941 -98129347 - AluSx SINE Alu -21 291 1 462 223 94 58 chr10 47459942 47460166 -98129122 - L1MB4 LINE L1 -1009 5635 5404 528 204 82 7 chr10 47460172 47460319 -98128969 - L1MB4 LINE L1 -127 6053 5896 3378 246 28 35 chr10 47460332 47461503 -98127785 - L1MB4 LINE L1 -1241 5403 4241 204 40 0 0 chr10 47461552 47461577 -98127711 + (TTCA)n Simple_repeat Simple_repeat 3 27 0 1329 196 37 51 chr10 47461587 47461883 -98127405 - AluJo SINE Alu -20 292 1 1437 225 35 64 chr10 47461885 47462240 -98127048 - L1MB4 LINE L1 -3601 3043 2679 1548 151 50 29 chr10 47462240 47462519 -98126769 + AluJb SINE Alu 11 295 -17 1437 225 35 64 chr10 47462519 47462692 -98126596 - L1MB4 LINE L1 -3965 2679 2502 2021 148 0 10 chr10 47462692 47462995 -98126293 - AluSx SINE Alu -12 300 1 1437 225 35 64 chr10 47462995 47463661 -98125627 - L1MB4 LINE L1 -4142 2502 1764 294 283 71 27 chr10 47463661 47463845 -98125443 - L1MB4 LINE L1 -6336 206 15 298 129 24 71 chr10 47463897 47463982 -98125306 + L1M4 LINE L1 1373 1453 -5406 573 266 71 8 chr10 47464019 47464286 -98125002 + L1M4 LINE L1 1730 2013 -4946 2862 209 77 16 chr10 47464325 47464730 -98124558 + L1MD2 LINE L1 5482 5861 -498 1064 256 84 20 chr10 47464730 47465124 -98124164 - LTR52 LTR ERVL -2 419 1 2862 209 77 16 chr10 47465124 47465521 -98123767 + L1MD2 LINE L1 5861 6333 -26 2235 135 0 0 chr10 47465523 47465834 -98123454 + AluJb SINE Alu 1 311 -1 2263 88 3 3 chr10 47465933 47466227 -98123061 + AluSc SINE Alu 1 294 -15 2879 212 31 51 chr10 47466575 47466677 -98122611 - L1MB8 LINE L1 -13 6976 6873 1687 113 58 91 chr10 47466677 47466986 -98122302 - AluSx SINE Alu -13 299 1 2042 131 0 7 chr10 47466994 47467285 -98122003 - AluSx SINE Alu -23 289 1 2879 212 31 51 chr10 47467285 47467957 -98121331 - L1MB8 LINE L1 -123 6866 6209 2270 99 3 0 chr10 47467957 47468251 -98121037 - AluSg SINE Alu -13 297 3 2879 212 31 51 chr10 47468251 47468315 -98120973 - L1MB8 LINE L1 -780 6209 6145 2590 203 45 5 chr10 47468333 47468934 -98120354 - L1MC3 LINE L1 -37 7748 7124 2376 194 59 52 chr10 47468949 47469356 -98119932 - L1MC3 LINE L1 -922 6863 6448 1949 166 0 7 chr10 47469356 47469663 -98119625 - AluSx SINE Alu -7 305 1 2376 194 59 52 chr10 47469663 47469935 -98119353 - L1MC3 LINE L1 -1337 6448 6179 1943 257 98 34 chr10 47469952 47470391 -98118897 + L1M4 LINE L1 4194 4603 -2354 2077 136 3 3 chr10 47470391 47470693 -98118595 + AluSx SINE Alu 1 302 -10 1943 257 98 34 chr10 47470693 47471140 -98118148 + L1M4 LINE L1 4603 5137 -1820 * 6600 252 89 24 chr10 47471134 47471561 -98117727 - L1MB8 LINE L1 -808 6149 5751 2185 119 16 10 chr10 47471561 47471864 -98117424 - AluSg SINE Alu -5 305 1 6600 252 89 24 chr10 47471864 47472365 -98116923 - L1MB8 LINE L1 -1206 5751 5284 2002 137 0 7 chr10 47472365 47472673 -98116615 - AluSq SINE Alu 0 306 1 6600 252 89 24 chr10 47472673 47473482 -98115806 - L1MB8 LINE L1 -1673 5284 4529 1930 163 3 10 chr10 47473482 47473789 -98115499 - AluJb SINE Alu -3 309 5 6600 252 89 24 chr10 47473789 47475038 -98114250 - L1MB8 LINE L1 -2428 4529 2966 327 182 0 0 chr10 47475064 47475119 -98114169 + Tigger5 DNA MER2_type 1 55 -2268 283 200 15 15 chr10 47475223 47475288 -98114000 + Tigger5 DNA MER2_type 2259 2323 0 1112 165 33 19 chr10 47475385 47475597 -98113691 - L1PB4 LINE L1 0 6156 5942 310 251 52 81 chr10 47475640 47475854 -98113434 - L1MEc LINE L1 -4294 2269 2050 1319 129 47 34 chr10 47475854 47476087 -98113201 + MER46A DNA MER2_type 1 236 0 310 251 52 81 chr10 47476087 47476115 -98113173 - L1MEc LINE L1 -4513 2050 2023 991 149 75 6 chr10 47476115 47476289 -98112999 - L1PA8A LINE L1 0 6131 5946 310 251 52 81 chr10 47476289 47476428 -98112860 - L1MEc LINE L1 -4540 2023 1898 2130 135 0 0 chr10 47476448 47476744 -98112544 - AluSx SINE Alu -16 296 1 233 228 0 0 chr10 47476751 47476808 -98112480 + T-rich Low_complexity Low_complexity 1 57 0 1699 186 17 24 chr10 47476817 47477113 -98112175 - AluJb SINE Alu -18 294 1 416 271 55 88 chr10 47477289 47477618 -98111670 - L1M2 LINE L1 -4385 1998 1454 26 0 0 0 chr10 47477643 47477669 -98111619 + AT_rich Low_complexity Low_complexity 1 26 0 374 263 10 0 chr10 47477669 47477768 -98111520 - U6 snRNA snRNA -6 101 2 2937 234 63 82 chr10 47477771 47477983 -98111305 - L1MB8 LINE L1 -4958 1897 1683 2094 118 0 26 chr10 47477983 47478296 -98110992 - AluSq SINE Alu -8 305 1 2937 234 63 82 chr10 47478296 47478457 -98110831 - L1MB8 LINE L1 -5172 1683 1521 2168 121 7 7 chr10 47478457 47478764 -98110524 - AluSx SINE Alu -5 307 1 2937 234 63 82 chr10 47478764 47479989 -98109299 - L1MB8 LINE L1 -5334 1521 347 2542 273 65 50 chr10 47479989 47480710 -98108578 + L1MEc LINE L1 362 1071 -5325 1847 138 0 45 chr10 47480710 47481021 -98108267 + AluJb SINE Alu 11 307 -5 2542 273 65 50 chr10 47481021 47481155 -98108133 + L1MEc LINE L1 1071 1202 -5194 2167 125 7 3 chr10 47481155 47481458 -98107830 + AluSc SINE Alu 1 304 -5 2542 273 65 50 chr10 47481458 47482211 -98107077 + L1MEc LINE L1 1202 1995 -4401 1449 254 70 43 chr10 47482249 47483047 -98106241 + L1MEc LINE L1 2202 3021 -3194 349 197 66 33 chr10 47483113 47483235 -98106053 - L1M4 LINE L1 -2988 3158 3033 22 0 0 0 chr10 47483371 47483393 -98105895 + AT_rich Low_complexity Low_complexity 1 22 0 226 164 36 0 chr10 47483433 47483488 -98105800 + (TA)n Simple_repeat Simple_repeat 2 58 0 1349 250 164 22 chr10 47483509 47484241 -98105047 + L1MEc LINE L1 3101 3936 -2279 4688 215 105 35 chr10 47484243 47485717 -98103571 + MER45R DNA AcHobo 4 1581 0 1656 267 83 35 chr10 47485722 47486575 -98102713 + L1MEc LINE L1 3933 4826 -1389 27 29 0 0 chr10 47486819 47486853 -98102435 + AT_rich Low_complexity Low_complexity 1 34 0 866 243 117 34 chr10 47487009 47487427 -98101861 - MLT1B LTR MaLR -4 386 1 191 35 0 35 chr10 47488027 47488056 -98101232 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 449 211 121 42 chr10 47490766 47490956 -98098332 - L1MD3 LINE L1 -2 7993 7789 207 100 0 0 chr10 47490966 47490996 -98098292 + (TG)n Simple_repeat Simple_repeat 1 30 0 339 260 65 24 chr10 47491386 47491509 -98097779 - Zaphod DNA AcHobo 0 4031 3904 273 322 55 20 chr10 47491514 47491660 -98097628 - MER115 DNA AcHobo -226 467 317 1065 235 122 10 chr10 47491933 47492342 -98096946 + L1M4 LINE L1 3052 3506 -2640 1276 116 0 6 chr10 47492359 47492531 -98096757 + AluSg/x SINE Alu 119 289 -23 1086 229 23 11 chr10 47492535 47492797 -98096491 + L1M4 LINE L1 3491 3755 -2391 1653 235 51 17 chr10 47492798 47493271 -98096017 + L1M4 LINE L1 3812 4300 -1846 2394 165 76 34 chr10 47493288 47493790 -98095498 + L1MC2 LINE L1 5811 6333 -11 1877 262 32 2 chr10 47493956 47494449 -98094839 + LTR53 LTR ERVL 11 518 -1 244 95 0 48 chr10 47495334 47495376 -98093912 + MLT1A1 LTR MaLR 3 42 -386 1922 104 12 0 chr10 47495458 47495728 -98093560 + AluSx SINE Alu 29 301 0 800 216 14 110 chr10 47495736 47496112 -98093176 + MLT1A1 LTR MaLR 39 428 0 610 149 0 37 chr10 47496371 47496478 -98092810 + FRAM SINE Alu 54 156 -20 2440 70 13 0 chr10 47496478 47496776 -98092512 + AluY SINE Alu 1 302 -9 2305 98 3 0 chr10 47498106 47498401 -98090887 + AluSq SINE Alu 1 296 -17 2190 123 0 3 chr10 47500793 47501094 -98088194 - AluSx SINE Alu -12 300 1 2033 108 77 0 chr10 47501437 47501723 -98087565 - AluSq SINE Alu -5 308 1 1768 108 104 0 chr10 47502001 47502286 -98087002 - AluSg1 SINE Alu 0 313 3 2063 146 10 0 chr10 47502389 47502697 -98086591 + AluSx SINE Alu 1 311 -1 881 149 0 7 chr10 47503571 47503719 -98085569 + L1PA16 LINE L1 6011 6157 -9 228 179 60 30 chr10 47505680 47505747 -98083541 + MER76 LTR ERV 602 670 -18 2349 111 0 0 chr10 47505770 47506076 -98083212 - AluSx SINE Alu -6 306 1 227 196 43 0 chr10 47506235 47506281 -98083007 + MER5A DNA MER1_type 59 106 -83 1959 125 7 17 chr10 47506638 47506774 -98082514 + AluSx SINE Alu 1 137 -175 2026 86 8 0 chr10 47506774 47507030 -98082258 + AluSq SINE Alu 39 296 -17 1959 125 7 17 chr10 47507030 47507189 -98082099 + AluSx SINE Alu 137 293 -19 213 39 0 0 chr10 47507189 47507215 -98082073 + (TA)n Simple_repeat Simple_repeat 2 27 0 515 211 197 56 chr10 47507404 47507617 -98081671 - MLT1C LTR MaLR 0 467 263 3081 121 36 16 chr10 47508821 47509319 -98079969 + MER49 LTR ERV1 1 508 -415 618 228 83 10 chr10 47509596 47509789 -98079499 + L1MC2 LINE L1 6138 6344 0 246 326 119 22 chr10 47510449 47510676 -98078612 + MIR SINE MIR 13 261 -1 248 340 0 0 chr10 47510871 47510965 -98078323 - MIR SINE MIR -61 147 54 2584 150 31 0 chr10 47511254 47511668 -98077620 - MSTA LTR MaLR -1 427 1 8980 166 28 29 chr10 47511668 47512914 -98076374 - MSTA-int LTR MaLR 0 1651 404 1522 210 0 11 chr10 47512914 47513241 -98076047 - AluJb SINE Alu 0 324 1 8980 166 28 29 chr10 47513241 47513645 -98075643 - MSTA-int LTR MaLR -1247 404 1 240 154 0 0 chr10 47513645 47513684 -98075604 - MSTA LTR MaLR 0 428 390 2290 109 7 0 chr10 47513684 47513977 -98075311 + AluSg SINE Alu 1 295 -15 2200 164 64 3 chr10 47513998 47514375 -98074913 - MSTA LTR MaLR -28 400 1 401 171 16 24 chr10 47514634 47514754 -98074534 - LTR49-int LTR ERV1 -423 4457 3698 600 65 39 0 chr10 47514797 47514874 -98074414 - MADE1 DNA Mariner 0 80 1 454 262 47 26 chr10 47514882 47515073 -98074215 - LTR49-int LTR ERV1 -2868 3730 3536 338 138 15 0 chr10 47515164 47515229 -98074059 - LTR49-int LTR ERV1 -4287 2471 2406 22 0 0 0 chr10 47516268 47516290 -98072998 + AT_rich Low_complexity Low_complexity 1 22 0 243 0 0 0 chr10 47516317 47516344 -98072944 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2350 77 3 0 chr10 47516347 47516634 -98072654 - AluY SINE Alu -23 288 1 335 196 25 98 chr10 47516634 47516797 -98072491 - LTR49-int LTR ERV1 -2503 3828 3678 29 90 0 0 chr10 47516797 47516875 -98072413 + AT_rich Low_complexity Low_complexity 1 78 0 248 265 31 10 chr10 47516967 47517065 -98072223 - L1M4 LINE L1 -2395 3751 3652 525 280 109 21 chr10 47517447 47517686 -98071602 - HSATI Satellite Satellite -317 260 1 647 249 95 0 chr10 47519094 47519283 -98070005 - MLT1G LTR MaLR -29 561 355 609 318 38 10 chr10 47519310 47519599 -98069689 - MLT1G LTR MaLR -293 297 1 1103 152 0 0 chr10 47519636 47519801 -98069487 - L1PA12 LINE L1 -5468 2113 1949 1639 99 21 4 chr10 47519801 47520044 -98069244 + L1PA13 LINE L1 5915 6161 -2 2117 128 0 0 chr10 47520296 47520623 -98068665 + AluSq SINE Alu 1 327 0 5731 124 26 20 chr10 47520625 47521531 -98067757 - MER49 LTR ERV1 -11 912 1 2435 194 64 41 chr10 47521860 47522500 -98066788 - HERVL68 LTR ERVL -1785 1252 598 180 97 0 0 chr10 47522598 47522629 -98066659 + (CCCA)n Simple_repeat Simple_repeat 1 31 0 268 279 0 70 chr10 47522650 47522736 -98066552 - HERVL68 LTR ERVL -2611 426 347 326 241 128 15 chr10 47522818 47522951 -98066337 - HERVL68 LTR ERVL -2888 149 2 1634 154 0 68 chr10 47523002 47523295 -98065993 + AluJo SINE Alu 1 273 -39 2174 213 80 10 chr10 47523325 47523827 -98065461 - MER68 LTR ERV1 0 562 26 2154 142 0 10 chr10 47523855 47524166 -98065122 - AluSc SINE Alu -1 308 1 1845 148 13 26 chr10 47524570 47524880 -98064408 + AluSx SINE Alu 1 306 -6 1424 169 154 0 chr10 47526190 47526450 -98062838 + AluSx SINE Alu 1 300 -12 2149 125 0 3 chr10 47527676 47527972 -98061316 + AluSx SINE Alu 1 295 -17 2315 101 13 0 chr10 47528020 47528326 -98060962 + AluSg SINE Alu 1 310 0 2414 67 0 10 chr10 47528511 47528808 -98060480 + AluSc SINE Alu 1 294 -15 1513 144 11 40 chr10 47528875 47528993 -98060295 - L1PB3 LINE L1 -7 6147 6027 2040 123 44 0 chr10 47528993 47529286 -98060002 - AluSq SINE Alu -7 306 1 1513 144 11 40 chr10 47529286 47529445 -98059843 - L1PB3 LINE L1 -127 6027 5878 2294 103 0 3 chr10 47531628 47531929 -98057359 + AluSg SINE Alu 2 301 -9 1388 231 55 9 chr10 47532478 47532803 -98056485 + MER58B DNA MER1_type 2 341 0 2474 92 0 0 chr10 47533051 47533357 -98055931 + AluSg SINE Alu 1 306 -4 2932 158 31 49 chr10 47533523 47534137 -98055151 - L1MB5 LINE L1 -6 6168 5566 673 203 80 47 chr10 47534139 47534415 -98054873 - L1MB5 LINE L1 -1475 4671 4387 823 189 33 7 chr10 47534415 47534568 -98054720 + MER58B DNA MER1_type 142 298 -43 1104 224 47 16 chr10 47534568 47534890 -98054398 - L1MB5 LINE L1 -1738 4408 4077 4865 181 36 9 chr10 47534900 47536236 -98053052 - L1MB2 LINE L1 -36 6633 5119 3196 240 57 43 chr10 47536235 47536497 -98052791 - L1MB2 LINE L1 -3706 2938 2681 * 2135 127 0 35 chr10 47536497 47536812 -98052476 - AluSg SINE Alu -6 304 1 3196 240 57 43 chr10 47536812 47539028 -98050260 - L1MB2 LINE L1 -3963 2681 330 1567 189 103 19 chr10 47539224 47539653 -98049635 - L1MC4 LINE L1 -1114 6928 6464 2230 117 3 0 chr10 47539676 47539974 -98049314 - AluSp SINE Alu -14 299 1 596 204 35 14 chr10 47540264 47540406 -98048882 - MLT1A1 LTR MaLR -220 145 1 5012 240 69 32 chr10 47540406 47542549 -98046739 - L1M4 LINE L1 -1728 4916 2696 989 110 58 31 chr10 47542562 47542753 -98046535 - L1MA3 LINE L1 0 6305 6110 30353 105 13 54 chr10 47542765 47549179 -98040109 + L1PA7 LINE L1 10 6149 -5 469 91 52 0 chr10 47549178 47549255 -98040033 - L1MA3 LINE L1 -193 6112 6032 * 3019 236 61 17 chr10 47549391 47550523 -98038765 - L1M4 LINE L1 -4631 2015 829 296 203 0 0 chr10 47550544 47550608 -98038680 + A-rich Low_complexity Low_complexity 1 64 0 40014 43 23 1 chr10 47550705 47556726 -98032562 + L1PA3 LINE L1 2 6165 0 436 290 15 0 chr10 47556730 47556861 -98032427 - L1M4 LINE L1 -5799 743 611 878 78 86 0 chr10 47556865 47556993 -98032295 - MER85 DNA T2_type 0 139 1 2186 116 13 7 chr10 47557232 47557542 -98031746 - AluSq SINE Alu -1 312 1 1676 120 0 0 chr10 47557651 47557876 -98031412 - AluSx SINE Alu -25 287 63 342 214 34 0 chr10 47558360 47558449 -98030839 + Charlie7 DNA MER1_type 51 142 -2470 252 0 0 0 chr10 47559496 47559524 -98029764 + (TG)n Simple_repeat Simple_repeat 2 29 0 347 217 50 89 chr10 47559916 47560096 -98029192 - L1ME3 LINE L1 0 6162 5990 23 0 0 0 chr10 47560099 47560122 -98029166 + AT_rich Low_complexity Low_complexity 1 23 0 1431 175 13 80 chr10 47560202 47560516 -98028772 + AluJo SINE Alu 3 295 -17 211 293 0 35 chr10 47560561 47560619 -98028669 + MER5A DNA MER1_type 116 171 -18 1896 181 0 0 chr10 47561268 47561555 -98027733 + AluSx SINE Alu 1 287 -25 2294 82 41 0 chr10 47563966 47564258 -98025030 - AluY SINE Alu -1 310 7 1824 164 39 0 chr10 47564828 47565109 -98024179 + AluSx SINE Alu 1 292 -20 549 236 50 33 chr10 47565721 47565962 -98023326 + L1 LINE L1 3496 3740 -2406 21 0 0 0 chr10 47566038 47566059 -98023229 + AT_rich Low_complexity Low_complexity 1 21 0 617 273 210 8 chr10 47566275 47566642 -98022646 + L1MC4 LINE L1 6473 6913 -1129 1847 176 7 7 chr10 47566643 47566945 -98022343 + AluJb SINE Alu 1 302 -10 3009 168 34 2 chr10 47566995 47567609 -98021679 + L1 LINE L1 4610 5243 -903 1455 150 39 0 chr10 47567609 47567869 -98021419 - MSTA LTR MaLR 0 428 159 732 98 16 8 chr10 47567883 47568005 -98021283 + L1MA3 LINE L1 6183 6305 0 603 205 31 8 chr10 47568149 47568276 -98021012 - MSTA LTR MaLR -296 130 1 5986 102 52 8 chr10 47568295 47569299 -98019989 + L1MA3 LINE L1 5258 6305 0 366 222 141 106 chr10 47569722 47570091 -98019197 + L1M4 LINE L1 4999 5380 -766 292 154 0 132 chr10 47570278 47570369 -98018919 + LOR1b LTR ERV1 1 79 -382 * 1594 144 155 43 chr10 47570361 47570735 -98018553 - MSTA LTR MaLR -9 419 4 1122 152 134 122 chr10 47570735 47571169 -98018119 + LOR1a LTR ERV1 59 497 0 3724 105 0 4 chr10 47572188 47572701 -98016587 + MER9 LTR ERVK 1 511 0 3994 75 52 0 chr10 47572701 47573264 -98016024 + HERVK9 LTR ERVK 1 592 -5324 9964 71 4 1 chr10 47573264 47574682 -98014606 + HERVK9 LTR ERVK 1268 2786 -3130 1489 81 45 5 chr10 47574682 47574904 -98014384 + HERVK9 LTR ERVK 3711 3941 -1975 * 7024 114 2 8 chr10 47574903 47575962 -98013326 + HERVK9 LTR ERVK 4582 5634 -282 2058 92 0 0 chr10 47576058 47576340 -98012948 + HERVK9 LTR ERVK 5635 5916 0 3473 117 4 12 chr10 47576340 47576855 -98012433 + MER9 LTR ERVK 1 511 0 1010 244 122 2 chr10 47576859 47577269 -98012019 - L1MDa LINE L1 -4112 2428 1970 2265 108 0 9 chr10 47580034 47580349 -98008939 + AluSx SINE Alu 1 312 0 426 139 56 0 chr10 47580479 47580590 -98008698 - AluSp/q SINE Alu 0 322 208 3563 119 0 4 chr10 47580703 47581216 -98008072 - MER9 LTR ERVK 0 511 1 2115 68 7 0 chr10 47581216 47581496 -98007792 - HERVK9 LTR ERVK 0 5916 5635 33537 74 16 13 chr10 47581594 47584669 -98004619 - HERVK9 LTR ERVK -284 5632 2568 243 0 0 0 chr10 47584669 47584696 -98004592 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 33537 74 16 13 chr10 47584696 47585534 -98003754 - HERVK9 LTR ERVK -3348 2568 1734 2404 65 0 3 chr10 47585534 47585826 -98003462 - AluY SINE Alu -20 291 1 33537 74 16 13 chr10 47585826 47586692 -98002596 - HERVK9 LTR ERVK -4182 1734 872 191 228 0 88 chr10 47586692 47586749 -98002539 - MER5B DNA MER1_type -69 109 58 33537 74 16 13 chr10 47586749 47587516 -98001772 - HERVK9 LTR ERVK -5044 872 1 3947 111 0 4 chr10 47587516 47588029 -98001259 - MER9 LTR ERVK 0 511 1 314 225 28 0 chr10 47588101 47588172 -98001116 - MER8 DNA MER2_type -2 237 165 427 333 0 0 chr10 47588202 47588322 -98000966 - MER8 DNA MER2_type -63 176 57 2197 196 61 26 chr10 47588325 47588819 -98000469 - MER9 LTR ERVK 0 511 1 2096 253 52 37 chr10 47588822 47590522 -97998766 - HERVK9 LTR ERVK -4 7321 3536 * 33986 146 9 9 chr10 47590499 47595907 -97993381 - HERVK9 LTR ERVK -735 5181 1 2220 199 57 28 chr10 47595911 47596404 -97992884 - MER9 LTR ERVK -4 507 1 335 172 35 0 chr10 47596404 47596462 -97992826 - MER2 DNA MER2_type -285 60 1 197 274 113 0 chr10 47597416 47597478 -97991810 - MIR SINE MIR -70 138 70 1962 146 7 0 chr10 47598060 47598348 -97990940 - AluSx SINE Alu -22 290 1 320 304 42 70 chr10 47598624 47598783 -97990505 + L2 LINE L2 2996 3145 -168 2269 103 3 6 chr10 47598783 47599095 -97990193 - AluY SINE Alu 0 311 1 320 304 42 70 chr10 47599095 47599221 -97990067 + L2 LINE L2 3145 3273 -40 1066 193 57 34 chr10 47599774 47600038 -97989250 - MER92B LTR ERV1 -365 271 2 278 197 28 0 chr10 47600466 47600537 -97988751 + CT-rich Low_complexity Low_complexity 4 76 0 2131 108 0 3 chr10 47600539 47600827 -97988461 - AluSq SINE Alu -26 287 1 1732 162 7 0 chr10 47600923 47601195 -97988093 - AluSx SINE Alu -38 274 1 2266 119 0 3 chr10 47601430 47601732 -97987556 - AluSp SINE Alu -12 301 1 2304 110 10 0 chr10 47601734 47602044 -97987244 - AluSp SINE Alu 0 313 1 869 217 0 0 chr10 47602554 47602729 -97986559 + AluJb SINE Alu 137 311 -1 306 356 0 0 chr10 47604055 47604159 -97985129 + (TG)n Simple_repeat Simple_repeat 2 105 0 2053 101 42 3 chr10 47604853 47605140 -97984148 - AluSq SINE Alu -14 299 2 323 208 136 45 chr10 47605154 47605418 -97983870 + L1 LINE L1 3070 3357 -2789 458 289 82 83 chr10 47605665 47606204 -97983084 + L1 LINE L1 3241 3778 -2368 766 222 33 22 chr10 47607777 47607957 -97981331 + Tigger2 DNA MER2_type 2533 2714 -4 518 290 31 6 chr10 47608934 47609096 -97980192 + MER58A DNA MER1_type 47 212 -12 1933 236 102 79 chr10 47609786 47610677 -97978611 - L1MC4a LINE L1 -1 7807 6896 1948 105 91 108 chr10 47610679 47611096 -97978192 - LTR14B LTR ERVK 0 608 1 2385 197 52 84 chr10 47611099 47611599 -97977689 - L1MC4a LINE L1 -909 6899 6425 321 26 0 0 chr10 47611599 47611637 -97977651 + (TG)n Simple_repeat Simple_repeat 2 39 0 2385 197 52 84 chr10 47611637 47611812 -97977476 - L1MC4a LINE L1 -1383 6425 6246 340 212 11 123 chr10 47611832 47611962 -97977326 - L1MC4a LINE L1 -1791 6017 5911 201 74 0 0 chr10 47611962 47611989 -97977299 + (TA)n Simple_repeat Simple_repeat 2 28 0 340 212 11 123 chr10 47611989 47612037 -97977251 - L1MC4a LINE L1 -1897 5911 5859 2354 106 0 3 chr10 47612209 47612521 -97976767 - AluSx SINE Alu -1 311 1 2020 109 27 10 chr10 47612884 47613178 -97976110 - AluSx SINE Alu -13 299 1 273 88 0 0 chr10 47613455 47613489 -97975799 - U6 snRNA snRNA -73 34 1 22 56 0 0 chr10 47613535 47613571 -97975717 + AT_rich Low_complexity Low_complexity 1 36 0 219 342 33 25 chr10 47614332 47614452 -97974836 - L2 LINE L2 -10 3262 3142 1277 263 70 48 chr10 47614693 47615260 -97974028 + L1MC5 LINE L1 6636 7215 -746 2740 146 43 5 chr10 47615262 47615707 -97973581 + MER4C LTR ERV1 1 462 -3 449 245 10 0 chr10 47615713 47615811 -97973477 + MSTD LTR MaLR 1 99 -297 251 196 89 80 chr10 47615825 47615937 -97973351 + L1MC5 LINE L1 7009 7121 -840 736 240 32 5 chr10 47616006 47616199 -97973089 + MSTD LTR MaLR 216 385 -11 218 179 0 15 chr10 47616609 47616676 -97972612 + (TG)n Simple_repeat Simple_repeat 2 67 0 2114 137 0 0 chr10 47617110 47617416 -97971872 - AluSq SINE Alu -7 306 1 270 0 0 0 chr10 47617612 47617642 -97971646 + (TG)n Simple_repeat Simple_repeat 2 31 0 2875 204 59 43 chr10 47618625 47619394 -97969894 - L1MC1 LINE L1 0 6333 5558 1464 228 21 34 chr10 47619478 47619856 -97969432 - MER93b LTR ERV1 0 373 1 1067 196 4 75 chr10 47619877 47620143 -97969145 - AluJb SINE Alu -45 267 21 542 253 74 30 chr10 47623120 47623306 -97965982 + MLT1J LTR MaLR 60 300 -211 354 340 0 48 chr10 47623323 47623470 -97965818 + L2 LINE L2 3174 3313 0 2203 111 7 3 chr10 47623742 47624040 -97965248 + AluSg SINE Alu 1 299 -11 227 369 82 21 chr10 47624863 47625142 -97964146 + L2 LINE L2 1533 1828 -1486 302 298 75 0 chr10 47625266 47625360 -97963928 - L2 LINE L2 -16 3297 3197 232 314 162 29 chr10 47626216 47626356 -97962932 + MIR SINE MIR 23 200 -62 2285 92 3 0 chr10 47626356 47626649 -97962639 + AluY SINE Alu 1 294 -17 232 314 162 29 chr10 47626649 47626712 -97962576 + MIR SINE MIR 200 253 -9 2187 153 27 21 chr10 47626822 47627195 -97962093 + THE1C LTR MaLR 1 375 0 433 266 158 30 chr10 47627221 47627424 -97961864 + MIR SINE MIR 34 262 0 1806 94 4 0 chr10 47630067 47630302 -97958986 + L1PA8 LINE L1 5936 6171 -1 180 211 19 39 chr10 47630665 47630717 -97958571 - MIR SINE MIR -59 149 99 712 184 0 57 chr10 47630929 47631070 -97958218 - FLAM_A SINE Alu 0 133 1 2060 192 28 35 chr10 47632033 47632277 -97957011 - MSTB LTR MaLR -7 419 178 23263 30 4 3 chr10 47632277 47635698 -97953590 - L1PA3 LINE L1 0 6155 2734 2060 192 28 35 chr10 47635698 47635875 -97953413 - MSTB LTR MaLR -248 178 1 255 222 56 0 chr10 47637179 47637251 -97952037 - HAL1 LINE L1 -335 2172 2097 537 315 54 67 chr10 47637404 47637795 -97951493 - HAL1 LINE L1 -423 2084 1699 282 236 101 27 chr10 47637914 47638062 -97951226 - HAL1 LINE L1 -982 1525 1367 408 271 40 60 chr10 47638081 47638232 -97951056 - HAL1 LINE L1 -1214 1293 1146 293 277 218 39 chr10 47638323 47638608 -97950680 - HAL1 LINE L1 -1597 910 575 310 360 110 24 chr10 47638752 47639080 -97950208 - HAL1 LINE L1 -2148 359 4 239 132 0 0 chr10 47639329 47639367 -97949921 + AluJo SINE Alu 87 124 -178 266 0 0 0 chr10 47639367 47639404 -97949884 + L1PA3 LINE L1 6116 6152 -3 1035 164 18 0 chr10 47639419 47639590 -97949698 + AluJo SINE Alu 123 296 -16 5291 157 25 3 chr10 47639713 47641373 -97947915 - L1PB1 LINE L1 -2 6149 4452 603 177 0 0 chr10 47641367 47641480 -97947808 + L1P LINE L1 3762 3874 -2272 * 40372 37 22 1 chr10 47641483 47647511 -97941777 - L1PA2 LINE L1 0 6155 2 2441 192 7 22 chr10 47647514 47648117 -97941171 + L1 LINE L1 3868 4461 -1685 22 70 0 0 chr10 47649240 47649283 -97940005 + AT_rich Low_complexity Low_complexity 1 43 0 6601 63 24 5 chr10 47650273 47651155 -97938133 + L1PA7 LINE L1 5254 6152 -2 2161 122 0 0 chr10 47651161 47651449 -97937839 + AluSq SINE Alu 1 288 -25 496 272 41 47 chr10 47652183 47652352 -97936936 + MER5B DNA MER1_type 11 178 0 325 183 69 122 chr10 47652390 47652521 -97936767 + MIR3 SINE MIR 84 207 -1 24 32 0 0 chr10 47652911 47652942 -97936346 + AT_rich Low_complexity Low_complexity 1 31 0 1798 160 0 17 chr10 47653121 47653414 -97935874 + AluSx SINE Alu 1 288 -24 669 263 6 0 chr10 47654049 47654205 -97935083 - MER20 DNA MER1_type -3 216 60 1285 210 195 8 chr10 47654221 47654811 -97934477 - Charlie1 DNA MER1_type -181 2580 1881 1211 185 104 30 chr10 47654876 47655146 -97934142 - AluSq SINE Alu -23 290 1 23 33 0 0 chr10 47655209 47655239 -97934049 + AT_rich Low_complexity Low_complexity 1 30 0 2089 94 66 0 chr10 47655700 47655986 -97933302 - AluSq SINE Alu -8 305 1 2413 106 0 0 chr10 47656020 47656331 -97932957 - AluY SINE Alu 0 311 1 2163 133 0 13 chr10 47656653 47656968 -97932320 + AluSq SINE Alu 2 312 -1 280 258 0 0 chr10 47657018 47657080 -97932208 - MER3 DNA MER1_type -109 100 39 240 174 277 67 chr10 47657072 47657296 -97931992 + Charlie2 DNA MER1_type 2384 2654 -208 * 202 310 78 16 chr10 47658447 47658576 -97930712 - L2 LINE L2 -907 2407 2271 590 212 0 9 chr10 47658660 47658773 -97930515 + FLAM_A SINE Alu 1 112 -30 2472 69 0 7 chr10 47658774 47659077 -97930211 - AluY SINE Alu -10 301 1 1282 199 90 22 chr10 47659109 47659386 -97929902 + AluJo SINE Alu 1 296 -16 704 286 130 44 chr10 47659561 47660188 -97929100 - L2 LINE L2 -16 3297 2593 40 0 0 0 chr10 47660478 47660518 -97928770 + AT_rich Low_complexity Low_complexity 1 40 0 272 161 46 8 chr10 47660656 47660786 -97928502 + (TA)n Simple_repeat Simple_repeat 1 135 0 1484 208 49 40 chr10 47660798 47661187 -97928101 + L1MB2 LINE L1 5708 6103 -68 1267 228 29 11 chr10 47661187 47661468 -97927820 - AluJo SINE Alu -14 288 3 1484 208 49 40 chr10 47661468 47661531 -97927757 + L1MB2 LINE L1 6103 6164 -7 27 0 0 0 chr10 47661577 47661604 -97927684 + AT_rich Low_complexity Low_complexity 1 27 0 1889 118 4 8 chr10 47661738 47662000 -97927288 + AluSq SINE Alu 1 261 -52 858 328 52 16 chr10 47662009 47662509 -97926779 + L1MA9 LINE L1 348 865 -5090 3474 238 46 9 chr10 47662527 47664611 -97924677 + L1MA9 LINE L1 3994 6158 -42 194 413 0 0 chr10 47665189 47665264 -97924024 - L2 LINE L2 -498 2816 2742 216 278 106 53 chr10 47665667 47665818 -97923470 + MER5A DNA MER1_type 30 188 -1 8301 39 0 0 chr10 47665930 47667712 -97921576 + L1PA3 LINE L1 4372 6152 -3 333 336 186 0 chr10 47668312 47668452 -97920836 - MER5A DNA MER1_type -1 188 23 498 203 97 60 chr10 47668619 47668836 -97920452 + L1MC4 LINE L1 7281 7505 -537 2196 110 0 28 chr10 47669168 47669485 -97919803 - AluSx SINE Alu -3 309 2 241 319 170 7 chr10 47670370 47670511 -97918777 - MER5A DNA MER1_type -7 182 19 253 243 9 99 chr10 47670726 47670837 -97918451 - MIR SINE MIR -9 253 153 2297 104 3 3 chr10 47670881 47671189 -97918099 - AluSp SINE Alu -5 308 1 180 288 102 0 chr10 47672679 47672738 -97916550 + L2 LINE L2 315 379 -2935 2392 148 16 5 chr10 47672896 47673328 -97915960 - LTR56 LTR ERV1 0 445 9 247 220 0 0 chr10 47673833 47673883 -97915405 + A-rich Low_complexity Low_complexity 1 50 0 1662 117 117 4 chr10 47674168 47674432 -97914856 + AluSp SINE Alu 1 294 -19 784 219 97 56 chr10 47675141 47675460 -97913828 - MER21B LTR ERV1 -109 754 423 1314 232 123 25 chr10 47675534 47676056 -97913232 + MER92B LTR ERV1 64 636 0 2426 94 0 0 chr10 47676434 47676742 -97912546 + AluSg SINE Alu 1 308 -2 2141 125 3 0 chr10 47678040 47678335 -97910953 + AluSx SINE Alu 1 296 -16 1916 37 4 8 chr10 47678398 47678639 -97910649 - L1PA5 LINE L1 -4 6150 5911 794 277 40 48 chr10 47678989 47679269 -97910019 + MER93a LTR ERV1 1 279 -123 2261 68 14 7 chr10 47679269 47679563 -97909725 + AluSx SINE Alu 1 296 -16 794 277 40 48 chr10 47679563 47679661 -97909627 + MER93a LTR ERV1 279 376 -26 2174 69 0 72 chr10 47679687 47680022 -97909266 - AluY SINE Alu 0 311 1 783 255 75 7 chr10 47681002 47681284 -97908004 - MER33 DNA MER1_type -15 309 9 1427 229 126 14 chr10 47681874 47682359 -97906929 - MLT1H LTR MaLR 0 549 11 251 321 1 45 chr10 47682408 47682521 -97906767 - MIR SINE MIR -107 101 1 2071 181 15 5 chr10 47682754 47683153 -97906135 - MER57A LTR ERV1 0 403 1 1227 194 12 8 chr10 47683153 47683406 -97905882 - MER57A-int LTR ERV1 0 7537 7284 549 212 18 0 chr10 47683411 47683524 -97905764 - LTR54B LTR ERV1 -365 133 19 2033 116 49 0 chr10 47683553 47683837 -97905451 + AluSg SINE Alu 1 298 -12 1535 81 62 147 chr10 47683937 47684257 -97905031 - AluYb8 SINE Alu -25 293 1 5212 186 54 52 chr10 47684257 47685353 -97903935 - MER57A-int LTR ERV1 -390 7147 6047 1968 91 87 0 chr10 47685353 47685618 -97903670 + AluSc SINE Alu 1 288 -21 5212 186 54 52 chr10 47685618 47685842 -97903446 - MER57A-int LTR ERV1 -1490 6047 5825 5148 165 13 43 chr10 47686170 47687003 -97902285 - MER57A-int LTR ERV1 -1717 5820 5020 2064 130 20 0 chr10 47687003 47687302 -97901986 + AluSx SINE Alu 1 305 -7 5148 165 13 43 chr10 47687302 47687466 -97901822 - MER57A-int LTR ERV1 -2517 5020 4853 2006 146 3 0 chr10 47687466 47687767 -97901521 + AluSg SINE Alu 1 302 -8 353 222 10 0 chr10 47687933 47688032 -97901256 + (TA)n Simple_repeat Simple_repeat 2 101 0 1217 189 29 36 chr10 47688032 47688312 -97900976 - MER57A-int LTR ERV1 -2674 4863 4586 508 180 82 90 chr10 47688314 47688436 -97900852 + AluJ SINE Alu 1 121 -181 35 24 0 0 chr10 47688436 47688478 -97900810 + AT_rich Low_complexity Low_complexity 1 42 0 300 240 10 80 chr10 47688478 47688578 -97900710 + L1MC4 LINE L1 6612 6704 -1338 990 187 0 39 chr10 47688584 47688766 -97900522 + AluJ SINE Alu 125 299 -13 953 174 89 45 chr10 47688768 47689105 -97900183 - MER57A-int LTR ERV1 -2309 4486 3687 3744 129 10 2 chr10 47689155 47689724 -97899564 - MER41B LTR ERV1 0 615 55 392 148 0 0 chr10 47689724 47689785 -97899503 - MER41B-int LTR ERV1 -3724 2222 2162 353 134 75 0 chr10 47689776 47689843 -97899445 - MER41B-int LTR ERV1 -4908 2629 2558 * 2090 90 4 0 chr10 47689843 47690109 -97899179 - AluSp SINE Alu -16 297 31 3935 60 45 0 chr10 47690153 47690622 -97898666 - LTR2B LTR ERV1 0 490 1 376 136 0 17 chr10 47690627 47690686 -97898602 - MER41B-int LTR ERV1 -4969 2568 2511 2225 122 37 61 chr10 47690687 47691065 -97898223 - MER41B-int LTR ERV1 -5166 2371 2003 1598 141 12 0 chr10 47691062 47691310 -97897978 - MER41B-int LTR ERV1 -4616 1330 1080 * 4350 130 11 5 chr10 47691299 47691930 -97897358 - MER41B-int LTR ERV1 -5311 635 1 4120 150 26 2 chr10 47691930 47692550 -97896738 - MER41B LTR ERV1 0 635 1 271 253 65 81 chr10 47692560 47692746 -97896542 - LTR19A-int LTR ERV1 -1991 2889 2707 23 0 0 0 chr10 47692767 47692790 -97896498 + AT_rich Low_complexity Low_complexity 1 23 0 321 155 0 0 chr10 47692959 47693017 -97896271 - LTR19A-int LTR ERV1 -3874 2884 2827 2123 112 3 10 chr10 47693073 47693376 -97895912 + AluSx SINE Alu 1 301 -11 2292 92 13 0 chr10 47693377 47693682 -97895606 + AluY SINE Alu 1 309 -2 1969 194 46 120 chr10 47693726 47694201 -97895087 + MER61E LTR ERV1 93 601 -178 2062 130 0 0 chr10 47694201 47694478 -97894810 + AluSg SINE Alu 1 277 -33 309 68 0 0 chr10 47694478 47694522 -97894766 + (CA)n Simple_repeat Simple_repeat 1 44 0 1969 194 46 120 chr10 47694522 47694707 -97894581 + MER61E LTR ERV1 599 779 0 441 226 20 0 chr10 47694912 47695014 -97894274 - LTR19A-int LTR ERV1 -2991 3340 3237 252 182 212 0 chr10 47695084 47695150 -97894138 - LTR19A-int LTR ERV1 -3772 1164 1085 256 226 57 0 chr10 47695231 47695284 -97894004 - LTR19A-int LTR ERV1 -3907 1108 1053 393 88 18 0 chr10 47695518 47695575 -97893713 - MER34C LTR ERV1 -369 216 159 382 274 0 35 chr10 47695602 47695715 -97893573 - LTR19A-int LTR ERV1 -3671 2660 2552 2027 115 45 0 chr10 47695784 47696071 -97893217 - AluSc SINE Alu -9 300 1 2944 217 17 42 chr10 47696123 47696832 -97892456 - LTR19A-int LTR ERV1 -6700 837 147 2858 131 22 59 chr10 47696832 47697337 -97891951 - LTR19A LTR ERV1 0 486 1 1222 110 0 0 chr10 47697337 47697500 -97891788 - LTR19A-int LTR ERV1 0 5586 5424 1279 107 0 22 chr10 47697500 47697678 -97891610 + AluY SINE Alu 108 281 -30 49500 94 19 13 chr10 47697682 47698662 -97890626 - LTR19A-int LTR ERV1 -754 6965 5992 2278 112 0 3 chr10 47698662 47698974 -97890314 + AluSq SINE Alu 1 311 -2 49500 94 19 13 chr10 47698974 47700174 -97889114 - LTR19A-int LTR ERV1 -1727 5992 4801 2250 130 0 0 chr10 47700174 47700482 -97888806 - AluSg SINE Alu -2 308 1 49500 94 19 13 chr10 47700482 47701107 -97888181 - LTR19A-int LTR ERV1 -2918 4801 4181 2018 144 0 16 chr10 47701107 47701420 -97887868 - AluSx SINE Alu -4 308 1 49500 94 19 13 chr10 47701420 47702678 -97886610 - LTR19A-int LTR ERV1 -3538 4181 2932 1819 133 4 0 chr10 47702678 47702933 -97886355 + AluSx SINE Alu 39 294 -18 49500 94 19 13 chr10 47702933 47705789 -97883499 - LTR19A-int LTR ERV1 -4787 2932 1 253 133 0 0 chr10 47705789 47705834 -97883454 - LTR19A LTR ERV1 0 486 442 2574 105 45 77 chr10 47705936 47706430 -97882858 - LTR19A LTR ERV1 -6 480 3 25 75 0 0 chr10 47707008 47707061 -97882227 + AT_rich Low_complexity Low_complexity 1 53 0 2049 122 7 7 chr10 47707244 47707539 -97881749 - AluSq SINE Alu -18 295 1 2264 108 3 10 chr10 47708264 47708578 -97880710 + AluSx SINE Alu 1 312 0 1801 173 71 9 chr10 47708700 47709023 -97880265 - MER61A LTR ERV1 0 343 1 1769 138 119 0 chr10 47709023 47709335 -97879953 - MER61A-int LTR ERV1 0 5217 4869 348 24 0 0 chr10 47709335 47709376 -97879912 + (CAA)n Simple_repeat Simple_repeat 2 42 0 3555 119 15 15 chr10 47709376 47709913 -97879375 - MER61A-int LTR ERV1 -396 4821 4285 2528 119 8 3 chr10 47709913 47710274 -97879014 + L1PB1 LINE L1 5788 6150 -1 4555 117 62 47 chr10 47710291 47710917 -97878371 + MER4B-int LTR ERV1 1424 1934 -4664 2059 115 7 3 chr10 47710917 47711212 -97878076 + AluSq SINE Alu 5 300 -13 4555 117 62 47 chr10 47711212 47711801 -97877487 + MER4B-int LTR ERV1 1934 2513 -4085 650 153 31 0 chr10 47711803 47711901 -97877387 - AluSc SINE Alu -18 291 191 531 289 43 27 chr10 47711902 47712089 -97877199 - MER21B LTR ERV1 -263 600 411 1456 241 149 28 chr10 47712116 47712646 -97876642 + MER92B LTR ERV1 33 626 -10 2366 87 3 0 chr10 47712953 47713252 -97876036 - AluSp SINE Alu -9 304 5 22 56 0 0 chr10 47713510 47713546 -97875742 + AT_rich Low_complexity Low_complexity 1 36 0 182 263 71 71 chr10 47713905 47714004 -97875284 + L2 LINE L2 3112 3210 -62 251 91 0 0 chr10 47715776 47715809 -97873479 + Alu SINE Alu 1 33 -268 2302 89 0 32 chr10 47715809 47716122 -97873166 + AluY SINE Alu 7 309 -2 530 280 50 50 chr10 47716302 47716502 -97872786 + MIR SINE MIR 9 208 -54 257 320 60 10 chr10 47716569 47716669 -97872619 - MER5A DNA MER1_type -30 159 55 799 229 109 5 chr10 47716678 47716879 -97872409 - L1MD3 LINE L1 -44 7951 7730 203 267 27 27 chr10 47716879 47716954 -97872334 - MER5A DNA MER1_type -114 75 1 1554 84 231 4 chr10 47717981 47718219 -97871069 + AluSg1 SINE Alu 6 297 -12 2308 84 17 0 chr10 47718652 47718951 -97870337 - AluSp SINE Alu -9 304 1 314 246 0 0 chr10 47719169 47719238 -97870050 + MER116 DNA Mariner 7 75 -5 1822 156 7 3 chr10 47719651 47719939 -97869349 - AluSx SINE Alu -23 289 1 2224 104 3 3 chr10 47720616 47720925 -97868363 + AluSx SINE Alu 1 309 -3 858 213 7 0 chr10 47721617 47721767 -97867521 - FAM SINE Alu -19 166 16 862 266 0 0 chr10 47721879 47722052 -97867236 + FAM SINE Alu 1 173 -2 21 0 0 0 chr10 47722184 47722205 -97867083 + AT_rich Low_complexity Low_complexity 1 21 0 2145 111 40 0 chr10 47723227 47723524 -97865764 - AluSg1 SINE Alu 0 309 1 1078 174 190 16 chr10 47726278 47726536 -97862752 - AluJo SINE Alu -8 304 2 342 67 0 0 chr10 47727118 47727163 -97862125 + (TG)n Simple_repeat Simple_repeat 2 46 0 240 133 0 0 chr10 47727169 47727214 -97862074 + LTR66 LTR ERVL 394 438 -172 3343 105 91 0 chr10 47727225 47727730 -97861558 - L1PB2 LINE L1 -204 5947 5397 3866 142 37 25 chr10 47728461 47728813 -97860475 - L1MA3 LINE L1 -7 6298 5932 1917 102 64 0 chr10 47728813 47729103 -97860185 + AluSg SINE Alu 1 307 0 3866 142 37 25 chr10 47729103 47729420 -97859868 - L1MA3 LINE L1 -373 5932 5620 2236 129 8 20 chr10 47729932 47730289 -97858999 - L1M1 LINE L1 -600 5705 5353 875 227 0 0 chr10 47730291 47730445 -97858843 - AluJ SINE Alu -26 286 133 2327 196 18 68 chr10 47730446 47730789 -97858499 - L1 LINE L1 -784 6781 6422 798 179 7 36 chr10 47730789 47730929 -97858359 - AluJ SINE Alu -176 136 1 2327 196 18 68 chr10 47730929 47731345 -97857943 - L1 LINE L1 -1143 6422 6027 9979 183 38 4 chr10 47731357 47733163 -97856125 - L1 LINE L1 -5681 1884 17 189 271 164 16 chr10 47735750 47735872 -97853416 + L2 LINE L2 1521 1660 -1654 1254 205 110 20 chr10 47936077 47936433 -97652855 + MER4E LTR ERV1 1 388 -391 2634 163 35 4 chr10 47936529 47937019 -97652269 + L1PA10 LINE L1 5655 6159 -9 2817 13 0 3 chr10 47937275 47937582 -97651706 + AluYa5 SINE Alu 1 306 -5 270 0 0 0 chr10 47937856 47937886 -97651402 + (T)n Simple_repeat Simple_repeat 1 30 0 5550 78 1 1 chr10 47940510 47941233 -97648055 - L1PA5 LINE L1 0 6154 5432 1799 178 0 14 chr10 47941388 47941681 -97647607 + AluJb SINE Alu 1 289 -23 332 153 333 0 chr10 47941992 47942064 -97647224 + Tigger3(Golem) DNA MER2_type 2 97 -2932 * 1290 126 10 24 chr10 47942062 47942269 -97647019 + Tigger3(Golem) DNA MER2_type 2802 3005 -24 2195 123 29 6 chr10 47942281 47942632 -97646656 - L1MB1 LINE L1 0 6168 5810 5459 205 24 8 chr10 47942785 47944007 -97645281 - L1 LINE L1 -1934 4212 2972 918 167 94 11 chr10 47945393 47945573 -97643715 + L1PB4 LINE L1 5956 6150 -6 2266 109 3 3 chr10 47945580 47945931 -97643357 + AluY SINE Alu 1 351 0 272 235 0 24 chr10 47946351 47946436 -97642852 + CT-rich Low_complexity Low_complexity 3 85 0 664 172 94 163 chr10 47946556 47946707 -97642581 - MER58A DNA MER1_type -2203 217 86 2172 93 0 4 chr10 47946707 47946985 -97642303 + AluSg1 SINE Alu 1 277 -32 664 172 94 163 chr10 47946985 47947066 -97642222 - MER58A DNA MER1_type -2334 86 1 336 264 69 0 chr10 47948131 47948218 -97641070 - MER81 DNA DNA 0 114 22 279 318 129 26 chr10 47949313 47949693 -97639595 + L1MC/D LINE L1 5342 5760 -2048 1800 159 34 0 chr10 47949812 47950108 -97639180 - AluJo SINE Alu -6 306 1 314 271 66 49 chr10 47951225 47951328 -97637960 + MIR SINE MIR 86 193 -69 2243 183 71 5 chr10 47951328 47951766 -97637522 - MLT1C LTR MaLR 0 467 1 314 271 66 49 chr10 47951766 47951784 -97637504 + MIR SINE MIR 193 209 -53 3021 150 103 2 chr10 47952257 47952842 -97636446 - MER73 LTR ERVL 0 644 1 1532 187 41 38 chr10 47953539 47953908 -97635380 + MLT1A2 LTR MaLR 1 370 -4 1433 167 46 43 chr10 47954057 47954380 -97634908 + MER33 DNA MER1_type 1 324 0 416 325 34 43 chr10 47954403 47954637 -97634651 + MIR SINE MIR 21 252 -10 281 311 168 16 chr10 47955337 47955658 -97633630 + L3 LINE CR1 1008 1377 -200 264 296 72 20 chr10 47956849 47957001 -97632287 + L1ME LINE L1 5629 5788 -333 2870 149 18 2 chr10 47957090 47957545 -97631743 + L1PA15 LINE L1 5704 6165 0 219 230 184 23 chr10 47958695 47958782 -97630506 - MIR SINE MIR -61 147 47 403 292 2 22 chr10 47959395 47959547 -97629741 - MIR SINE MIR -57 151 15 1576 148 4 50 chr10 47959922 47960199 -97629089 - AluSx SINE Alu -48 264 1 247 303 92 0 chr10 47960209 47960318 -97628970 - L1MC/D LINE L1 -2008 5800 5682 427 178 33 11 chr10 47964017 47964107 -97625181 + MLT1J2 LTR MaLR 67 158 -292 681 239 41 65 chr10 47965358 47965651 -97623637 - HAL1 LINE L1 -977 1530 1245 2037 146 17 3 chr10 47965665 47966357 -97622931 - L1PA16 LINE L1 -7 6159 5414 * 5984 214 35 20 chr10 47966353 47966759 -97622529 + L1P LINE L1 3987 4385 -1761 315 0 0 0 chr10 47966759 47966794 -97622494 + (CA)n Simple_repeat Simple_repeat 2 36 0 5984 214 35 20 chr10 47966794 47967477 -97621811 + L1P LINE L1 4385 5104 -1042 2140 134 0 3 chr10 47967477 47967791 -97621497 + AluSq SINE Alu 1 313 0 5984 214 35 20 chr10 47967791 47968092 -97621196 + L1P LINE L1 5104 5399 -747 450 277 119 45 chr10 47968089 47968425 -97620863 - HAL1 LINE L1 -1340 1167 807 * 2770 174 36 6 chr10 47968619 47969124 -97620164 - MLT2B1 LTR ERVL 0 520 1 1432 91 58 4 chr10 47969382 47969623 -97619665 + L1MA8 LINE L1 6037 6290 -1 3277 227 48 17 chr10 47969626 47971316 -97617972 + L1MC3 LINE L1 4256 5400 -746 488 282 95 63 chr10 47971607 47972146 -97617142 - HAL1 LINE L1 -1680 827 272 2439 53 0 0 chr10 47972431 47972759 -97616529 + AluY SINE Alu 1 328 0 2462 81 0 0 chr10 47972815 47973123 -97616165 - AluY SINE Alu -2 309 2 575 240 46 29 chr10 47974947 47975122 -97614166 + MER5B DNA MER1_type 1 178 0 265 203 78 109 chr10 47975160 47975288 -97614000 + MIR3 SINE MIR 84 207 -1 1233 87 0 0 chr10 47975437 47975586 -97613702 + AluSp SINE Alu 130 278 -35 676 258 0 0 chr10 47975615 47975774 -97613514 + FRAM SINE Alu 2 160 -6 229 244 59 30 chr10 47976261 47976396 -97612892 - Charlie1a DNA MER1_type -15 1440 1302 718 250 6 0 chr10 47976396 47976552 -97612736 - MER20 DNA MER1_type -3 216 60 1742 226 178 29 chr10 47976568 47976734 -97612554 - Charlie1a DNA MER1_type -1487 1274 1134 2187 114 0 0 chr10 47976734 47977033 -97612255 + AluY SINE Alu 1 299 -12 1742 226 178 29 chr10 47977033 47977047 -97612241 - Charlie1a DNA MER1_type -1627 1134 1123 2141 129 3 0 chr10 47977047 47977342 -97611946 + AluSx SINE Alu 5 300 -12 1742 226 178 29 chr10 47977342 47977821 -97611467 - Charlie1a DNA MER1_type -1638 1123 493 1251 172 101 30 chr10 47977821 47978089 -97611199 - AluJo SINE Alu -25 287 1 1742 226 178 29 chr10 47978089 47978156 -97611132 - Charlie1a DNA MER1_type -2268 493 437 944 207 121 12 chr10 47978194 47978450 -97610838 - Charlie1a DNA MER1_type -1086 369 86 2390 109 0 0 chr10 47978516 47978829 -97610459 + AluSq SINE Alu 1 313 0 364 244 0 13 chr10 47978830 47978908 -97610380 - Charlie1a DNA MER1_type -1378 77 1 2002 121 6 50 chr10 47979706 47980029 -97609259 - AluSg SINE Alu -1 309 1 860 135 7 14 chr10 47981933 47982081 -97607207 - AluYa5 SINE Alu 0 311 165 2305 88 0 0 chr10 47982476 47982771 -97606517 + AluSx SINE Alu 2 296 -16 638 235 0 8 chr10 47983303 47983435 -97605853 + FLAM_A SINE Alu 1 131 -2 1588 180 3 30 chr10 47983438 47983733 -97605555 + AluJo SINE Alu 1 287 -25 238 313 164 36 chr10 47984080 47984275 -97605013 - L2 LINE L2 -240 3073 2854 486 172 54 0 chr10 47984283 47984376 -97604912 + LTR47A LTR ERVL 5 102 -350 2292 106 0 0 chr10 47984387 47984689 -97604599 - AluSx SINE Alu -10 302 1 1344 158 28 28 chr10 47984690 47984937 -97604351 + LTR47A LTR ERVL 206 452 0 3011 158 22 50 chr10 47984941 47985542 -97603746 + L1MB2 LINE L1 5586 6169 -2 2132 108 11 3 chr10 47985567 47985853 -97603435 - AluSx SINE Alu -24 288 1 2249 104 3 13 chr10 47985866 47986175 -97603113 - AluSp SINE Alu -7 306 1 2103 129 7 0 chr10 47986175 47986470 -97602818 - AluSp SINE Alu -16 297 1 1647 214 41 37 chr10 47986484 47986975 -97602313 + L1MD3 LINE L1 7160 7829 -151 41 82 0 0 chr10 47986992 47987089 -97602199 + AT_rich Low_complexity Low_complexity 1 97 0 266 316 42 0 chr10 47987092 47987187 -97602101 + L1MD3 LINE L1 7840 7938 -57 348 24 0 0 chr10 47987817 47987858 -97601430 + (TCC)n Simple_repeat Simple_repeat 2 42 0 2049 113 7 0 chr10 47987925 47988253 -97601035 + AluSq SINE Alu 1 330 0 1034 255 168 5 chr10 47988309 47988744 -97600544 + LTR33 LTR ERVL 15 520 -1 235 176 0 0 chr10 47990312 47990363 -97598925 + MER69 DNA AcHobo 2444 2494 -32 243 157 0 0 chr10 47990889 47990940 -97598348 - MIR SINE MIR -114 148 99 2115 130 0 3 chr10 47992329 47992637 -97596651 - AluSx SINE Alu -5 307 1 2582 72 27 0 chr10 47992848 47993183 -97596105 + LTR14A LTR ERVK 1 344 0 183 80 0 0 chr10 47993945 47993970 -97595318 + (GGGA)n Simple_repeat Simple_repeat 4 28 0 2345 76 0 3 chr10 47994191 47994493 -97594795 + AluY SINE Alu 1 301 -10 2260 74 40 0 chr10 47994495 47994793 -97594495 + AluY SINE Alu 2 311 0 509 294 29 68 chr10 47994874 47994965 -97594323 + L1M4 LINE L1 4963 5056 -1090 1446 149 137 57 chr10 47994965 47994998 -97594290 - MLT1A1 LTR MaLR -2 363 334 2128 128 0 0 chr10 47994998 47995295 -97593993 + AluSx SINE Alu 1 297 -15 1446 149 137 57 chr10 47995295 47995597 -97593691 - MLT1A1 LTR MaLR -31 334 1 509 294 29 68 chr10 47995597 47995784 -97593504 + L1M4 LINE L1 5056 5230 -916 353 300 16 1 chr10 47995791 47995928 -97593360 + L1P LINE L1 5290 5427 -729 1032 132 32 73 chr10 47996340 47996506 -97592782 - L1MA4A LINE L1 -4 6299 6143 2009 125 0 69 chr10 47996506 47996841 -97592447 - AluSx SINE Alu 0 312 1 1032 132 32 73 chr10 47996841 47996893 -97592395 - L1MA4A LINE L1 -160 6143 6090 2234 98 0 0 chr10 47997386 47997682 -97591606 - AluY SINE Alu -15 296 1 805 96 0 0 chr10 47998757 47998861 -97590427 + AluSp SINE Alu 1 104 -209 433 282 110 66 chr10 47999618 47999937 -97589351 - L2 LINE L2 -348 2966 2634 274 323 60 15 chr10 48000121 48000280 -97589008 - MIR SINE MIR -67 141 18 724 299 47 5 chr10 48000665 48000879 -97588409 - MIR SINE MIR -11 251 29 313 297 191 29 chr10 48001717 48001926 -97587362 + MIR SINE MIR 2 244 -18 669 76 0 0 chr10 48002232 48002324 -97586964 + (TGGA)n Simple_repeat Simple_repeat 3 94 0 195 220 102 0 chr10 48003577 48003636 -97585652 + MIR SINE MIR 79 143 -119 322 319 86 14 chr10 48004036 48004178 -97585110 - MIR SINE MIR -62 146 16 297 190 63 13 chr10 48004727 48004806 -97584482 + MER53 DNA DNA 103 185 -4 364 278 191 0 chr10 48005310 48005483 -97583805 - MIR SINE MIR -56 206 1 456 319 42 28 chr10 48005660 48005873 -97583415 - MIR SINE MIR -14 248 33 250 365 51 0 chr10 48006531 48006665 -97582623 - MIR3 SINE MIR -68 140 8 220 364 91 15 chr10 48007025 48007157 -97582131 - L2 LINE L2 -9 3263 3122 526 317 26 30 chr10 48007873 48008109 -97581179 - MIR SINE MIR -20 242 3 275 202 10 0 chr10 48009407 48009506 -97579782 + (TG)n Simple_repeat Simple_repeat 1 100 0 186 218 50 69 chr10 48011999 48012100 -97577188 - L2 LINE L2 -388 2925 2827 942 202 6 6 chr10 48013083 48013266 -97576022 + AluJo SINE Alu 122 304 -8 294 317 55 21 chr10 48013370 48013515 -97575773 + MIR3 SINE MIR 37 186 -22 213 207 172 0 chr10 48013722 48013780 -97575508 - MIR SINE MIR -63 145 78 264 284 69 10 chr10 48014620 48014722 -97574566 + MER5A DNA MER1_type 39 146 -43 511 335 149 15 chr10 48015570 48015967 -97573321 - L3 LINE CR1 -117 1460 1011 334 245 20 89 chr10 48015934 48016010 -97573278 + MIR SINE MIR 20 87 -121 * 2432 131 80 10 chr10 48016010 48016408 -97572880 - MSTB LTR MaLR 0 426 1 334 245 20 89 chr10 48016408 48016466 -97572822 + MIR SINE MIR 87 147 -61 2098 220 108 13 chr10 48016467 48017004 -97572284 - MLT1G LTR MaLR -2 588 1 1153 172 57 97 chr10 48017202 48017551 -97571737 - MLT1A2 LTR MaLR 0 374 40 2258 71 10 10 chr10 48017771 48018082 -97571206 + AluY SINE Alu 1 311 0 210 71 0 0 chr10 48018082 48018110 -97571178 + (GGAA)n Simple_repeat Simple_repeat 4 31 0 1727 76 8 16 chr10 48018762 48019013 -97570275 + AluY SINE Alu 62 310 -1 1954 189 90 9 chr10 48019648 48020093 -97569195 + MER31A LTR ERV1 1 481 -4 324 237 31 0 chr10 48020343 48020440 -97568848 + LTR67 LTR ERVL 458 557 0 311 267 183 8 chr10 48020462 48020582 -97568706 + L2 LINE L2 3167 3307 -6 270 266 0 13 chr10 48021021 48021100 -97568188 - MLT1L LTR MaLR -535 80 3 254 368 94 5 chr10 48021143 48021344 -97567944 - L2 LINE L2 -218 3054 2836 30 0 0 0 chr10 48022659 48022689 -97566599 + GC_rich Low_complexity Low_complexity 1 30 0 289 244 80 66 chr10 48022950 48023163 -97566125 + L1ME1 LINE L1 5175 5390 -756 1245 265 39 18 chr10 48023197 48023639 -97565649 + L1ME1 LINE L1 5527 5977 -187 244 70 0 0 chr10 48023640 48023683 -97565605 + MADE1 DNA Mariner 1 43 -37 394 256 30 12 chr10 48023728 48023896 -97565392 + L1ME1 LINE L1 5993 6163 -3 1747 216 58 8 chr10 48023897 48024552 -97564736 - L1MD2 LINE L1 -522 5720 5042 1584 210 197 4 chr10 48024555 48025084 -97564204 + L1MD2 LINE L1 5719 6349 -10 393 22 0 0 chr10 48025100 48025146 -97564142 + (TC)n Simple_repeat Simple_repeat 2 47 0 216 0 0 0 chr10 48025145 48025169 -97564119 + (TG)n Simple_repeat Simple_repeat 1 24 0 * 1076 159 2 19 chr10 48025239 48025467 -97563821 - MLT2B2 LTR ERVL 0 515 304 1704 197 24 40 chr10 48025467 48025838 -97563450 + MLT1A1 LTR MaLR 1 365 0 1683 183 47 37 chr10 48027138 48027520 -97561768 - MLT1B LTR MaLR 0 390 5 516 319 72 78 chr10 48028581 48029110 -97560178 + L1MEd LINE L1 528 1053 -5066 262 295 48 0 chr10 48029156 48029322 -97559966 + (CACCT)n Simple_repeat Simple_repeat 3 176 0 190 321 0 0 chr10 48029780 48029836 -97559452 - MIR SINE MIR 0 262 207 679 136 34 17 chr10 48030404 48030581 -97558707 + (TG)n Simple_repeat Simple_repeat 1 180 0 507 151 0 4 chr10 48032828 48033029 -97556259 + AluJo SINE Alu 4 285 -27 515 380 109 6 chr10 48034612 48034962 -97554326 - L1 LINE L1 -2042 4104 3719 261 121 43 43 chr10 48035155 48035295 -97553993 + (CA)n Simple_repeat Simple_repeat 1 140 0 309 111 51 26 chr10 48035319 48035436 -97553852 + (CA)n Simple_repeat Simple_repeat 1 120 0 3013 195 28 4 chr10 48037061 48037770 -97551518 - L1M2 LINE L1 -4071 2778 2053 2708 165 7 0 chr10 48037809 48038234 -97551054 - MSTA LTR MaLR 0 428 1 758 260 96 12 chr10 48040107 48040351 -97548937 - MIR SINE MIR 0 262 6 3039 141 54 6 chr10 48041472 48042011 -97547277 + LTR24B LTR ERV1 4 568 -8 664 218 0 107 chr10 48042334 48042596 -97546692 + LTR23-int LTR ERV1 417 650 -4473 301 297 0 0 chr10 48044222 48044313 -97544975 + L1PA15-16 LINE L1 1474 1564 -5285 11971 247 30 14 chr10 48044317 48045605 -97543683 + L1PA16 LINE L1 1355 2621 -4228 2301 117 10 0 chr10 48045605 48045914 -97543374 + AluSp SINE Alu 1 312 -1 11971 247 30 14 chr10 48045914 48048530 -97540758 + L1PA16 LINE L1 2621 5412 -1437 198 0 0 0 chr10 48048530 48048552 -97540736 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 11971 247 30 14 chr10 48048552 48049016 -97540272 + L1PA16 LINE L1 5412 5867 -982 29078 113 25 80 chr10 48049029 48054492 -97534796 + L1PA6 LINE L1 12 5775 -391 6779 72 7 13 chr10 48054492 48054539 -97534749 + L1PA6 LINE L1 5254 5300 -854 2249 123 3 0 chr10 48054539 48054848 -97534440 + AluSp SINE Alu 1 310 -3 6779 72 7 13 chr10 48054848 48055707 -97533581 + L1PA6 LINE L1 5300 6154 0 29078 113 25 80 chr10 48055707 48055733 -97533555 + L1PA6 LINE L1 5775 5159 -1007 252 100 0 0 chr10 48055733 48055773 -97533515 + (CA)n Simple_repeat Simple_repeat 1 40 0 29078 113 25 80 chr10 48055773 48056173 -97533115 + L1PA6 LINE L1 5158 5579 -587 2859 148 16 10 chr10 48056180 48056686 -97532602 - L1PA14 LINE L1 -1 6160 5652 1531 313 35 28 chr10 48056724 48057504 -97531784 - L1PA12 LINE L1 -5563 2018 1234 1308 162 0 0 chr10 48057506 48057728 -97531560 - L1PA12 LINE L1 -7350 231 10 2944 169 41 8 chr10 48057728 48058313 -97530975 + L1PA16 LINE L1 6265 6868 -1 23 0 0 0 chr10 48058557 48058580 -97530708 + AT_rich Low_complexity Low_complexity 1 23 0 41 21 0 0 chr10 48058609 48058657 -97530631 + AT_rich Low_complexity Low_complexity 1 48 0 2313 170 20 2 chr10 48058664 48059069 -97530219 + MSTB LTR MaLR 13 424 -2 2164 131 16 0 chr10 48059168 48059474 -97529814 + AluY SINE Alu 1 311 0 2313 102 156 5 chr10 48059619 48059991 -97529297 + MSTA LTR MaLR 1 428 0 577 335 50 33 chr10 48060298 48060758 -97528530 + PABL_B-int LTR ERV1 6231 6698 -424 2952 160 27 2 chr10 48061206 48061761 -97527527 + LTR24B LTR ERV1 1 569 -7 203 218 0 69 chr10 48063463 48063564 -97525724 + (GGCTG)n Simple_repeat Simple_repeat 5 98 0 271 250 98 18 chr10 48064227 48064339 -97524949 + L2 LINE L2 3149 3269 -3 247 148 10 153 chr10 48065082 48065291 -97523997 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 203 179 13 90 chr10 48065242 48065398 -97523890 + (TGGG)n Simple_repeat Simple_repeat 3 146 0 * 216 264 48 48 chr10 48067845 48068029 -97521259 + MIR SINE MIR 41 223 -39 257 293 73 39 chr10 48069579 48069784 -97519504 - L2 LINE L2 -25 3288 3077 367 238 0 9 chr10 48069808 48069913 -97519375 + HAL1b LINE L1 1016 1119 -229 41 78 0 0 chr10 48070002 48070092 -97519196 + AT_rich Low_complexity Low_complexity 1 90 0 219 346 26 0 chr10 48071063 48071141 -97518147 + MIR SINE MIR 167 246 -16 710 179 0 0 chr10 48071661 48071778 -97517510 + MER46A DNA MER2_type 2 118 -118 419 268 16 24 chr10 48072482 48072609 -97516679 + L1ME2 LINE L1 6007 6132 -32 197 289 67 0 chr10 48073031 48073121 -97516167 - L2 LINE L2 -219 3053 2958 277 158 74 11 chr10 48074596 48074691 -97514597 + (CA)n Simple_repeat Simple_repeat 1 101 0 181 132 44 29 chr10 48074731 48074799 -97514489 + (CA)n Simple_repeat Simple_repeat 1 69 0 314 151 70 41 chr10 48074927 48075099 -97514189 + (CA)n Simple_repeat Simple_repeat 2 178 0 295 154 68 43 chr10 48075395 48075557 -97513731 + (CA)n Simple_repeat Simple_repeat 2 167 0 251 19 0 77 chr10 48078085 48078137 -97511151 + (CCCTAA)n Simple_repeat Simple_repeat 4 51 0 231 146 0 0 chr10 48078183 48078224 -97511064 + (CCCTAA)n Simple_repeat Simple_repeat 2 42 0 303 200 20 10 chr10 48079961 48080061 -97509227 + (CA)n Simple_repeat Simple_repeat 1 101 0 307 241 36 12 chr10 48082570 48082653 -97506635 - MIR SINE MIR -105 157 73 8614 121 9 0 chr10 48083029 48084299 -97504989 - HSMAR1 DNA Mariner -5 1282 1 351 259 27 0 chr10 48084768 48084880 -97504408 + HAL1 LINE L1 785 899 -1608 597 237 32 75 chr10 48084886 48085194 -97504094 + HAL1 LINE L1 2176 2470 -37 245 328 30 25 chr10 48085264 48085462 -97503826 + L1MB4 LINE L1 3 201 -6341 4381 183 30 51 chr10 48085462 48086451 -97502837 + LTR5 LTR ERVK 1 969 0 271 290 70 0 chr10 48086813 48086913 -97502375 + L1MB4 LINE L1 804 910 -5736 1129 219 36 66 chr10 48087033 48087493 -97501795 + L1MB4 LINE L1 820 1292 -5354 1386 227 58 0 chr10 48087493 48087788 -97501500 + AluJb SINE Alu 1 312 0 1129 219 36 66 chr10 48087788 48088511 -97500777 + L1MB4 LINE L1 1292 2640 -4006 7093 218 26 92 chr10 48088516 48090044 -97499244 + L1MB4 LINE L1 2712 4339 -2339 6250 84 25 2 chr10 48090044 48091328 -97497960 + L1PA11 LINE L1 4822 6174 0 7093 218 26 92 chr10 48091328 48094060 -97495228 + L1MB4 LINE L1 4339 6678 0 293 267 76 19 chr10 48094075 48094180 -97495108 + MIR SINE MIR 25 135 -73 1703 273 48 6 chr10 48094505 48095003 -97494285 - MLT1G LTR MaLR -62 528 10 676 260 61 39 chr10 48094999 48095205 -97494083 + HsTC2 DNA Tc2 1525 1725 -173 * 2093 136 21 47 chr10 48095205 48095588 -97493700 + THE1C LTR MaLR 3 375 0 9715 118 31 19 chr10 48095589 48096419 -97492869 + THE1C-int LTR MaLR 2 863 -717 2190 132 3 0 chr10 48096419 48096723 -97492565 + AluSx SINE Alu 1 305 -7 9715 118 31 19 chr10 48096723 48097451 -97491837 + THE1C-int LTR MaLR 863 1580 0 2078 136 5 46 chr10 48097451 48097842 -97491446 + THE1C LTR MaLR 1 375 0 676 260 61 39 chr10 48097842 48097994 -97491294 + HsTC2 DNA Tc2 1724 1894 -4 446 279 97 16 chr10 48098003 48098391 -97490897 - L1ME LINE L1 -615 5547 5125 354 320 17 28 chr10 48099236 48099417 -97489871 + CT-rich Low_complexity Low_complexity 1 179 0 226 283 133 35 chr10 48101170 48101283 -97488005 - MIR SINE MIR -109 153 30 399 319 132 0 chr10 48102372 48102576 -97486712 - MIR SINE MIR -21 241 11 192 368 105 15 chr10 48103533 48103666 -97485622 + L3 LINE CR1 230 374 -1203 248 328 38 46 chr10 48103899 48104030 -97485258 + L3 LINE CR1 708 837 -740 285 213 16 0 chr10 48104275 48104336 -97484952 - MIR SINE MIR -65 143 82 450 76 0 93 chr10 48105584 48105702 -97483586 + (TG)n Simple_repeat Simple_repeat 1 107 0 309 276 8 52 chr10 48105831 48105965 -97483323 - LTR67 LTR ERVL -2 555 428 2489 211 84 20 chr10 48107545 48108179 -97481109 + MER63C DNA MER1_type 257 930 0 225 301 27 14 chr10 48108369 48108442 -97480846 + LTR67 LTR ERVL 98 171 -386 395 310 33 61 chr10 48108587 48108800 -97480488 + LTR67 LTR ERVL 346 552 -5 299 322 74 27 chr10 48109117 48109266 -97480022 - MIR3 SINE MIR -34 174 19 250 208 0 0 chr10 48111179 48111227 -97478061 + L2 LINE L2 3225 3272 0 221 114 80 57 chr10 48111773 48111861 -97477427 + (TATATG)n Simple_repeat Simple_repeat 2 91 0 182 306 0 0 chr10 48112202 48112251 -97477037 + L2 LINE L2 2983 3031 -241 268 271 24 0 chr10 48112314 48112399 -97476889 + L2 LINE L2 3185 3271 -1 243 0 0 0 chr10 48113297 48113324 -97475964 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 529 292 56 19 chr10 48115770 48115986 -97473302 + MIR SINE MIR 25 248 -14 213 255 171 44 chr10 48116877 48117128 -97472160 + L2 LINE L2 2539 2821 -493 250 312 43 50 chr10 48117138 48117279 -97472009 - MIR SINE MIR -2 260 121 629 257 101 22 chr10 48117535 48117811 -97471477 + L2 LINE L2 3012 3309 -4 188 361 39 15 chr10 48118553 48118683 -97470605 - MIR SINE MIR -83 179 47 639 233 71 59 chr10 48118782 48119035 -97470253 + L2 LINE L2 3058 3313 0 298 319 50 7 chr10 48119200 48119341 -97469947 - MIR3 SINE MIR -10 198 52 1357 167 131 36 chr10 48119814 48119927 -97469361 + MLT1A1 LTR MaLR 3 104 -261 2218 119 0 29 chr10 48119927 48120239 -97469049 + AluSg SINE Alu 1 303 -7 1689 185 0 48 chr10 48120246 48120560 -97468728 + AluJo SINE Alu 1 299 -13 1357 167 131 36 chr10 48120560 48120767 -97468521 + MLT1A1 LTR MaLR 109 362 -3 2066 135 23 0 chr10 48122138 48122442 -97466846 - AluSx SINE Alu -1 311 1 521 242 57 13 chr10 48124838 48124995 -97464293 - MIR SINE MIR -65 197 34 197 325 26 0 chr10 48125077 48125154 -97464134 + MIR SINE MIR 62 140 -122 324 258 19 32 chr10 48125506 48125661 -97463627 - HAL1b LINE L1 -9 1339 1187 228 236 56 0 chr10 48125635 48125707 -97463581 - L1MC4 LINE L1 -1348 6694 6619 * 295 243 29 0 chr10 48126323 48126393 -97462895 + MIR SINE MIR 82 153 -109 1142 183 50 79 chr10 48126597 48126957 -97462331 - MER33 DNA MER1_type 0 324 1 245 365 16 24 chr10 48127499 48127625 -97461663 + MIR SINE MIR 30 154 -108 334 155 191 0 chr10 48128176 48128260 -97461028 - MER103 DNA DNA -63 103 4 479 288 8 0 chr10 48129362 48129487 -97459801 - MER5A DNA MER1_type -7 182 57 301 247 62 21 chr10 48129535 48129632 -97459656 + MER5B DNA MER1_type 3 103 -75 686 261 93 0 chr10 48130338 48130553 -97458735 - MIR SINE MIR -26 236 2 349 51 322 0 chr10 48131493 48131552 -97457736 - MADE1 DNA Mariner -2 78 1 262 296 0 11 chr10 48135285 48135373 -97453915 + MIR SINE MIR 172 258 -4 316 39 77 0 chr10 48135406 48135458 -97453830 + A-rich Low_complexity Low_complexity 2 57 0 1525 270 5 21 chr10 48137900 48138289 -97450999 - MER93a LTR ERV1 -2 400 18 1606 167 85 3 chr10 48138803 48139132 -97450156 + MER46B DNA MER2_type 6 236 0 261 255 0 0 chr10 48139274 48139325 -97449963 - L1MC/D LINE L1 -2160 5648 5598 3342 227 91 92 chr10 48139393 48139848 -97449440 - L1ME1 LINE L1 -5 6161 5707 2159 121 13 0 chr10 48139848 48140146 -97449142 + AluSx SINE Alu 1 302 -10 3342 227 91 92 chr10 48140146 48141564 -97447724 - L1ME1 LINE L1 -459 5707 4124 1290 64 0 0 chr10 48141564 48141720 -97447568 - AluY SINE Alu -10 301 146 3342 227 91 92 chr10 48141720 48142277 -97447011 - L1ME1 LINE L1 -2042 4124 3568 213 295 0 0 chr10 48143082 48143143 -97446145 - MIR SINE MIR -123 139 79 4052 179 26 41 chr10 48144220 48144573 -97444715 - L1MB8 LINE L1 -3 6175 5818 225 167 0 0 chr10 48144573 48144609 -97444679 - Alu SINE Alu -68 234 199 4052 179 26 41 chr10 48144609 48145498 -97443790 - L1MB8 LINE L1 -360 5818 4911 1934 197 34 10 chr10 48145593 48146009 -97443279 - MLT2C2 LTR ERVL -38 426 1 214 338 26 0 chr10 48146011 48146088 -97443200 - MIR SINE MIR -108 154 76 1210 175 149 3 chr10 48146102 48146402 -97442886 + L1MA9 LINE L1 5974 6305 -7 191 298 0 0 chr10 48147145 48147192 -97442096 - MIR SINE MIR -172 90 44 295 243 14 0 chr10 48147304 48147374 -97441914 + MER94 DNA DNA 60 130 -4 592 290 82 36 chr10 48148369 48148700 -97440588 - LTR16A LTR ERVL 0 450 105 434 330 16 20 chr10 48148848 48149068 -97440220 - L1MC/D LINE L1 -556 5610 5389 195 129 0 0 chr10 48149307 48149338 -97439950 + (CATG)n Simple_repeat Simple_repeat 2 32 0 25 51 0 0 chr10 48149495 48149534 -97439754 + AT_rich Low_complexity Low_complexity 1 39 0 267 248 5 17 chr10 48149846 48149949 -97439339 - L1ME LINE L1 -339 5782 5681 29 0 0 0 chr10 48149960 48149989 -97439299 + AT_rich Low_complexity Low_complexity 1 29 0 884 121 40 0 chr10 48150250 48150374 -97438914 + FRAM SINE Alu 24 152 -24 568 211 49 0 chr10 48151343 48151466 -97437822 - MER45A DNA AcHobo -1 177 49 199 313 55 55 chr10 48152514 48152696 -97436592 + MIR SINE MIR 1 182 -80 502 246 70 35 chr10 48158691 48158862 -97430426 - MIR SINE MIR -14 248 72 293 290 32 0 chr10 48159870 48159963 -97429325 + GA-rich Low_complexity Low_complexity 5 100 0 602 214 96 39 chr10 48160042 48160220 -97429068 + MER3 DNA MER1_type 2 189 -20 212 315 0 65 chr10 48161304 48161396 -97427892 + MIR SINE MIR 37 122 -86 528 274 213 7 chr10 48162574 48162851 -97426437 - MER46C DNA MER2_type -4 334 1 29 0 0 0 chr10 48164002 48164031 -97425257 + AT_rich Low_complexity Low_complexity 1 29 0 466 301 77 62 chr10 48164041 48164446 -97424842 - MLT1K LTR MaLR -11 577 167 1947 165 7 7 chr10 48164610 48164919 -97424369 - AluJb SINE Alu -3 309 1 459 325 105 15 chr10 48164923 48165265 -97424023 - L1ME4a LINE L1 -295 5826 5454 362 211 242 0 chr10 48166325 48166453 -97422835 + MER5A DNA MER1_type 6 164 -25 194 286 125 0 chr10 48166524 48166580 -97422708 + L2 LINE L2 3250 3312 -1 294 169 34 34 chr10 48169139 48169228 -97420060 + LTR16A1 LTR ERVL 336 424 -33 25 0 0 0 chr10 48170215 48170240 -97419048 + AT_rich Low_complexity Low_complexity 1 25 0 261 330 80 0 chr10 48171505 48171605 -97417683 - MIR SINE MIR -86 176 69 273 229 180 10 chr10 48172722 48172818 -97416470 - MIR SINE MIR -63 145 54 180 296 42 0 chr10 48173910 48173981 -97415307 - MIR SINE MIR -71 191 118 186 167 0 0 chr10 48175181 48175217 -97414071 - MIR SINE MIR -65 197 162 214 231 37 9 chr10 48176217 48176325 -97412963 + CT-rich Low_complexity Low_complexity 4 114 0 610 303 153 10 chr10 48176576 48177087 -97412201 + L2 LINE L2 2718 3307 -6 506 317 69 15 chr10 48177369 48177571 -97411717 - MIR SINE MIR -30 232 20 491 238 94 25 chr10 48178157 48178317 -97410971 + MIR SINE MIR 73 243 -19 300 330 10 10 chr10 48178702 48178805 -97410483 + L1ME LINE L1 5333 5435 -686 327 219 45 62 chr10 48178936 48179114 -97410174 + L1ME4a LINE L1 5938 6112 -9 280 183 39 10 chr10 48179114 48179218 -97410070 + CT-rich Low_complexity Low_complexity 1 107 0 456 281 143 18 chr10 48179995 48180212 -97409076 - MIR SINE MIR -17 245 2 338 282 15 38 chr10 48180567 48180698 -97408590 - MIR3 SINE MIR -47 161 34 246 224 0 45 chr10 48180886 48180953 -97408335 + MIR3 SINE MIR 114 177 -31 310 335 26 19 chr10 48181229 48181384 -97407904 - MIR SINE MIR -21 241 86 188 278 153 0 chr10 48181589 48181661 -97407627 - MIR SINE MIR -149 113 31 22 0 0 0 chr10 48182962 48182984 -97406304 + GC_rich Low_complexity Low_complexity 1 22 0 1860 169 92 20 chr10 48183797 48184252 -97405036 + Charlie4a DNA MER1_type 21 508 0 283 253 24 12 chr10 48184753 48184836 -97404452 + C-rich Low_complexity Low_complexity 6 89 0 206 317 12 12 chr10 48185881 48185963 -97403325 + MIR3 SINE MIR 75 156 -52 426 244 31 47 chr10 48186051 48186178 -97403110 + MIR SINE MIR 31 155 -107 195 129 0 0 chr10 48186394 48186425 -97402863 + (A)n Simple_repeat Simple_repeat 1 31 0 420 20 0 0 chr10 48187193 48187242 -97402046 + (TG)n Simple_repeat Simple_repeat 1 49 0 240 35 0 0 chr10 48187241 48187270 -97402018 + (GA)n Simple_repeat Simple_repeat 1 29 0 * 250 262 121 35 chr10 48187626 48187767 -97401521 + LTR16A1 LTR ERVL 52 204 -253 1025 134 82 141 chr10 48188620 48188925 -97400363 + LTR12 LTR ERV1 1 287 -427 284 226 36 24 chr10 48188925 48189009 -97400279 + LTR30 LTR ERV1 559 643 -79 635 154 14 13 chr10 48189009 48189126 -97400162 + LTR12 LTR ERV1 301 714 0 3144 285 49 70 chr10 48189156 48191063 -97398225 + HERVL LTR ERVL 873 2835 -2161 2569 139 29 10 chr10 48191088 48191499 -97397789 - MSTB LTR MaLR 0 426 8 1495 334 78 16 chr10 48191526 48193407 -97395881 + HERVL LTR ERVL 2896 4951 -813 641 297 36 48 chr10 48193945 48194363 -97394925 + LTR16A LTR ERVL 21 433 -17 716 206 199 21 chr10 48194459 48194745 -97394543 - MER113 DNA MER1_type? -154 367 31 1406 251 119 31 chr10 48195050 48195639 -97393649 + MLT1E1 LTR MaLR 8 648 -6 342 221 16 8 chr10 48196574 48196696 -97392592 + GA-rich Low_complexity Low_complexity 2 124 0 570 226 168 26 chr10 48196729 48196955 -97392333 - MLT1E LTR MaLR -22 571 314 906 195 29 6 chr10 48198316 48198490 -97390798 - AluJo SINE Alu -128 184 7 1137 118 19 6 chr10 48198508 48198669 -97390619 - AluSg/x SINE Alu -13 299 137 1175 212 63 0 chr10 48198675 48198930 -97390358 - L1M4c LINE L1 -4814 1570 1300 1565 113 8 179 chr10 48198931 48199294 -97389994 + AluJo SINE Alu 1 301 -1 769 181 91 101 chr10 48199306 48199512 -97389776 + L1M4 LINE L1 5060 5264 -882 662 227 0 0 chr10 48199512 48199631 -97389657 - FLAM_A SINE Alu -14 119 1 769 181 91 101 chr10 48199631 48199711 -97389577 + L1M4 LINE L1 5264 5343 -803 302 148 49 123 chr10 48199719 48199841 -97389447 + HAL1 LINE L1 2359 2471 -36 999 192 56 0 chr10 48199849 48200047 -97389241 + MER20 DNA MER1_type 6 214 -5 2167 139 0 0 chr10 48200066 48200368 -97388920 + AluSx SINE Alu 1 302 -10 275 115 39 0 chr10 48200471 48200523 -97388765 + CT-rich Low_complexity Low_complexity 3 56 0 1110 109 39 0 chr10 48200525 48200681 -97388607 - AluSp SINE Alu -3 310 149 2326 96 13 0 chr10 48201341 48201643 -97387645 + AluSg SINE Alu 1 306 -4 1003 195 13 61 chr10 48202324 48202555 -97386733 + AluJo SINE Alu 1 220 -92 1797 209 16 14 chr10 48205039 48205407 -97383881 + L1MA8 LINE L1 5809 6177 -114 2686 39 0 0 chr10 48205571 48205878 -97383410 + AluY SINE Alu 1 307 -4 628 102 56 0 chr10 48206244 48206352 -97382936 + L1MA8 LINE L1 6178 6291 0 2550 57 0 22 chr10 48206835 48207151 -97382137 - AluY SINE Alu -2 309 1 2304 108 0 9 chr10 48208239 48208554 -97380734 - AluSq SINE Alu -1 312 1 569 221 8 0 chr10 48208757 48208879 -97380409 + L1M4 LINE L1 3568 3690 -2456 * 658 168 134 45 chr10 48208871 48209050 -97380238 + L1M4 LINE L1 4368 4562 -1584 1409 200 44 19 chr10 48209050 48209320 -97379968 + AluJb SINE Alu 1 277 -35 415 167 89 0 chr10 48209336 48209401 -97379887 + L1M4 LINE L1 4549 4626 -1520 201 39 0 0 chr10 48209401 48209427 -97379861 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 415 167 89 0 chr10 48209427 48209451 -97379837 + L1M4 LINE L1 4626 4646 -1500 1451 217 30 30 chr10 48210191 48210495 -97378793 - AluJb SINE Alu -6 306 3 2062 137 43 0 chr10 48210946 48211245 -97378043 + AluSx SINE Alu 1 312 0 182 244 293 16 chr10 48211463 48211586 -97377702 - MIR SINE MIR -56 206 50 1181 143 0 0 chr10 48211864 48212032 -97377256 - AluSg/x SINE Alu -13 299 132 2507 80 0 0 chr10 48212044 48212345 -97376943 - AluY SINE Alu -10 301 1 23 54 0 0 chr10 48214057 48214094 -97375194 + AT_rich Low_complexity Low_complexity 1 37 0 26 0 0 0 chr10 48214167 48214193 -97375095 + AT_rich Low_complexity Low_complexity 1 26 0 2396 189 19 2 chr10 48214263 48214724 -97374564 - L1PA16 LINE L1 -10 6858 6390 11640 247 22 18 chr10 48214724 48218897 -97370391 - L1PA16 LINE L1 -976 5872 1588 1742 229 99 40 chr10 48218897 48219420 -97369868 - MLT2B3 LTR ERVL 0 554 1 11640 247 22 18 chr10 48219420 48219588 -97369700 - L1PA16 LINE L1 -5260 1588 1422 269 335 32 13 chr10 48219861 48220019 -97369269 - L1PA16 LINE L1 -5257 1592 1432 249 328 20 56 chr10 48220439 48220621 -97368667 - L1PA16 LINE L1 -5271 1567 779 783 390 7 16 chr10 48220805 48221251 -97368037 - L1PA16 LINE L1 -6343 495 54 25 31 0 0 chr10 48221355 48221387 -97367901 + AT_rich Low_complexity Low_complexity 1 32 0 2496 67 0 10 chr10 48221421 48221721 -97367567 + AluY SINE Alu 1 297 -14 1854 168 4 0 chr10 48225123 48225403 -97363885 - AluJb SINE Alu -30 282 2 781 272 76 19 chr10 48226367 48226683 -97362605 + L2 LINE L2 2976 3309 -4 694 156 0 16 chr10 48226819 48226947 -97362341 + L1MA7 LINE L1 5989 6114 -177 787 188 15 0 chr10 48226948 48227081 -97362207 + AluJo SINE Alu 2 136 -176 577 182 35 96 chr10 48227082 48227280 -97362008 + L1MA7 LINE L1 6106 6291 0 965 164 6 6 chr10 48227369 48227534 -97361754 + AluJo SINE Alu 129 293 -19 1869 130 91 7 chr10 48228925 48229210 -97360078 + AluSx SINE Alu 1 309 -3 650 164 27 9 chr10 48229672 48229782 -97359506 + FLAM_C SINE Alu 6 117 -26 369 0 0 0 chr10 48229782 48229823 -97359465 + (CA)n Simple_repeat Simple_repeat 2 42 0 2521 89 0 6 chr10 48231044 48231358 -97357930 + AluSx SINE Alu 1 312 0 25 51 0 0 chr10 48231564 48231603 -97357685 + AT_rich Low_complexity Low_complexity 1 39 0 217 250 0 0 chr10 48232274 48232326 -97356962 + L2 LINE L2 2425 2476 -838 336 239 65 11 chr10 48232520 48232612 -97356676 - MER21B LTR ERV1 -58 805 709 587 251 99 0 chr10 48232613 48232804 -97356484 - L2 LINE L2 -892 2422 2213 624 274 165 27 chr10 48232811 48233187 -97356101 - LTR41 LTR ERVL -6 767 340 554 215 194 17 chr10 48233294 48233531 -97355757 - L2 LINE L2 -2427 887 609 1630 151 20 23 chr10 48234011 48234194 -97355094 - AluJo SINE Alu -8 304 121 495 0 0 0 chr10 48234194 48234249 -97355039 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 1630 151 20 23 chr10 48234249 48234370 -97354918 - AluJo SINE Alu -191 121 1 248 315 34 0 chr10 48235241 48235330 -97353958 - MIR SINE MIR -93 115 24 206 278 42 14 chr10 48235502 48235574 -97353714 + L2 LINE L2 3240 3313 0 617 210 144 6 chr10 48235976 48236143 -97353145 - MER3 DNA MER1_type 0 209 20 477 294 147 9 chr10 48236970 48237188 -97352100 - MIR SINE MIR -13 249 2 1623 144 42 83 chr10 48238225 48238538 -97350750 - AluJb SINE Alu -12 300 1 318 264 39 23 chr10 48239404 48239533 -97349755 - MIR SINE MIR -36 226 96 2318 97 3 16 chr10 48239759 48240068 -97349220 + AluSp SINE Alu 1 305 -8 1769 155 54 3 chr10 48240443 48240760 -97348528 - L1MA4 LINE L1 0 6300 5968 222 37 0 0 chr10 48240906 48240933 -97348355 + (TATATG)n Simple_repeat Simple_repeat 2 28 0 518 246 72 18 chr10 48240973 48241140 -97348148 - L1MC4a LINE L1 -1884 5924 5749 2312 81 3 13 chr10 48241654 48241961 -97347327 + AluY SINE Alu 1 304 -7 1159 176 40 0 chr10 48242482 48242681 -97346607 - MER58A DNA MER1_type -16 208 2 1709 158 14 4 chr10 48242986 48243296 -97345992 + AluSx SINE Alu 1 313 0 22 35 0 0 chr10 48243785 48243814 -97345474 + AT_rich Low_complexity Low_complexity 1 29 0 1967 147 3 10 chr10 48247002 48247314 -97341974 - AluJo SINE Alu -2 310 1 1162 249 81 8 chr10 48247429 48247823 -97341465 - L1MC4 LINE L1 -799 7243 6821 1615 185 0 14 chr10 48249573 48249865 -97339423 + AluJo SINE Alu 1 288 -24 2124 108 3 3 chr10 48249991 48250279 -97339009 - AluSc SINE Alu -21 288 1 760 183 8 8 chr10 48251551 48251682 -97337606 - FLAM_A SINE Alu -2 131 1 1237 240 83 65 chr10 48251806 48252182 -97337106 - MLT1D LTR MaLR 0 505 116 1535 219 73 6 chr10 48252182 48252524 -97336764 - MLT1A1 LTR MaLR 0 365 1 1237 240 83 65 chr10 48252524 48252643 -97336645 - MLT1D LTR MaLR -389 116 1 22 0 0 0 chr10 48252770 48252792 -97336496 + AT_rich Low_complexity Low_complexity 1 22 0 1950 127 4 0 chr10 48253087 48253362 -97335926 + AluSx SINE Alu 4 279 -33 2418 96 0 0 chr10 48253403 48253705 -97335583 + AluSp SINE Alu 1 302 -11 639 195 0 114 chr10 48253742 48253952 -97335336 + L1M3 LINE L1 5256 5441 -727 374 0 0 21 chr10 48255133 48255180 -97334108 + (TG)n Simple_repeat Simple_repeat 2 47 0 423 0 0 0 chr10 48255807 48255854 -97333434 + (TG)n Simple_repeat Simple_repeat 2 48 0 244 313 35 9 chr10 48255891 48256006 -97333282 - 5S rRNA rRNA -2 119 2 423 303 15 8 chr10 48256269 48256401 -97332887 - L1MC1 LINE L1 0 6333 6201 1545 199 25 39 chr10 48256401 48256762 -97332526 - MER93b LTR ERV1 -17 356 1 1175 176 8 65 chr10 48256783 48257045 -97332243 - AluJb SINE Alu -45 267 21 236 311 120 47 chr10 48257158 48257540 -97331748 - L2 LINE L2 -1863 1451 1042 2371 89 0 16 chr10 48257637 48257953 -97331335 - AluSx SINE Alu -1 311 1 205 333 28 19 chr10 48257967 48258075 -97331213 - L2 LINE L2 -2338 976 868 21 0 0 0 chr10 48259956 48259977 -97329311 + AT_rich Low_complexity Low_complexity 1 21 0 2342 88 3 0 chr10 48259981 48260276 -97329012 + AluY SINE Alu 1 296 -15 259 359 90 14 chr10 48260383 48260673 -97328615 + L2 LINE L2 1532 1843 -1471 223 296 56 0 chr10 48260806 48260877 -97328411 - L2 LINE L2 -43 3229 3155 189 353 37 59 chr10 48261727 48261863 -97327425 + MIR3 SINE MIR 25 157 -51 1989 124 26 20 chr10 48261958 48262264 -97327024 + AluSx SINE Alu 5 312 0 1989 82 123 0 chr10 48262287 48262556 -97326732 + AluSp SINE Alu 1 302 -11 404 194 9 65 chr10 48262561 48262669 -97326619 + L1M4 LINE L1 4282 4383 -1763 247 67 0 0 chr10 48262669 48262720 -97326568 + AluSp/q SINE Alu 256 306 0 1453 142 12 149 chr10 48262766 48262932 -97326356 + THE1B LTR MaLR 1 78 -286 2027 162 0 0 chr10 48262932 48263235 -97326053 - AluSx SINE Alu -9 303 1 1453 142 12 149 chr10 48263235 48263483 -97325805 + THE1B LTR MaLR 78 358 -6 384 276 188 16 chr10 48263519 48263711 -97325577 + MIR SINE MIR 35 259 -3 189 171 0 0 chr10 48264650 48264685 -97324603 + (CTGGGG)n Simple_repeat Simple_repeat 3 37 0 2199 102 0 20 chr10 48266272 48266577 -97322711 + AluSx SINE Alu 1 299 -13 689 184 7 64 chr10 48267502 48267643 -97321645 - FLAM_A SINE Alu 0 133 1 1888 201 58 15 chr10 48268657 48268872 -97320416 - MSTB LTR MaLR -12 414 210 2234 130 0 0 chr10 48268872 48269172 -97320116 - AluSx SINE Alu -12 300 1 1888 201 58 15 chr10 48269172 48269353 -97319935 - MSTB LTR MaLR -216 210 1 2020 138 0 10 chr10 48269644 48269941 -97319347 + AluY SINE Alu 1 294 -17 34 24 0 0 chr10 48270349 48270390 -97318898 + AT_rich Low_complexity Low_complexity 1 41 0 2253 116 3 0 chr10 48270785 48271088 -97318200 + AluSx SINE Alu 1 304 -8 364 181 56 0 chr10 48271256 48271328 -97317960 - HAL1 LINE L1 -335 2172 2097 288 349 29 14 chr10 48271649 48271858 -97317430 - HAL1 LINE L1 -597 1910 1699 255 251 120 34 chr10 48271928 48272103 -97317185 - HAL1 LINE L1 -951 1556 1367 244 262 29 87 chr10 48272122 48272431 -97316857 - HAL1 LINE L1 -1214 1293 1003 273 281 41 33 chr10 48272521 48272642 -97316646 - HAL1 LINE L1 -1765 742 621 347 336 182 32 chr10 48272718 48273152 -97316136 - HAL1 LINE L1 -2005 502 4 1187 167 5 23 chr10 48273396 48273611 -97315677 + AluJo SINE Alu 87 297 -15 3572 209 24 4 chr10 48273723 48273734 -97315554 - L1 LINE L1 -852 5294 5285 2938 105 9 40 chr10 48273734 48274190 -97315098 - L1PB1 LINE L1 -1 6150 5709 3572 209 24 4 chr10 48274190 48274997 -97314291 - L1 LINE L1 -861 5285 4459 3307 194 20 16 chr10 48274998 48275024 -97314264 + L1M4 LINE L1 3762 3786 -2360 2316 84 0 7 chr10 48275024 48275321 -97313967 + AluSg SINE Alu 1 295 -15 3307 194 20 16 chr10 48275321 48275941 -97313347 + L1M4 LINE L1 3786 4414 -1732 180 77 0 0 chr10 48275941 48275967 -97313321 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 3307 194 20 16 chr10 48275967 48276016 -97313272 + L1M4 LINE L1 4414 4461 -1685 2198 100 3 7 chr10 48277113 48277412 -97311876 + AluY SINE Alu 1 298 -13 2361 70 40 0 chr10 48277417 48277715 -97311573 + AluY SINE Alu 2 311 0 1487 149 137 57 chr10 48277891 48277924 -97311364 - MLT1A1 LTR MaLR -2 363 334 2147 128 0 0 chr10 48277924 48278221 -97311067 + AluSx SINE Alu 1 297 -15 1487 149 137 57 chr10 48278221 48278523 -97310765 - MLT1A1 LTR MaLR -31 334 1 317 249 65 70 chr10 48278525 48278710 -97310578 + L1M4 LINE L1 5047 5230 -916 377 298 16 0 chr10 48278733 48278854 -97310434 + L1P LINE L1 5305 5427 -729 1059 123 36 78 chr10 48279266 48279432 -97309856 - L1MA4A LINE L1 -4 6299 6143 2060 125 0 69 chr10 48279432 48279767 -97309521 - AluSx SINE Alu 0 312 1 1059 123 36 78 chr10 48279767 48279819 -97309469 - L1MA4A LINE L1 -160 6143 6090 2308 98 0 0 chr10 48280312 48280608 -97308680 - AluY SINE Alu -15 296 1 264 286 57 0 chr10 48282905 48282975 -97306313 + MER91C DNA MER1_type 43 116 -24 194 250 97 0 chr10 48283759 48283831 -97305457 + MIR SINE MIR 176 254 -8 25 31 0 0 chr10 48284689 48284721 -97304567 + AT_rich Low_complexity Low_complexity 1 32 0 1162 99 6 12 chr10 48288970 48289142 -97300146 - L1M1 LINE L1 -4716 2849 2679 622 208 138 0 chr10 48289266 48289425 -97299863 + MER53 DNA DNA 7 187 -2 317 373 10 23 chr10 48289460 48289714 -97299574 - LTR16A LTR ERVL -202 248 1 2244 88 57 0 chr10 48290192 48290488 -97298800 + AluSp SINE Alu 1 313 0 2071 150 37 6 chr10 48291142 48291469 -97297819 + MER1B DNA MER1_type 1 337 0 2457 161 35 24 chr10 48292149 48292572 -97296716 - MSTC LTR MaLR 0 428 1 720 237 126 0 chr10 48293769 48293959 -97295329 + MER20 DNA MER1_type 6 219 0 676 265 76 22 chr10 48294022 48294245 -97295043 - MIR SINE MIR 0 262 28 216 0 0 0 chr10 48294390 48294414 -97294874 + (TTTA)n Simple_repeat Simple_repeat 4 27 0 25 0 0 0 chr10 48294501 48294526 -97294762 + AT_rich Low_complexity Low_complexity 1 25 0 42 77 0 0 chr10 48294631 48294722 -97294566 + AT_rich Low_complexity Low_complexity 1 91 0 25 20 0 59 chr10 48295292 48295343 -97293945 + AT_rich Low_complexity Low_complexity 1 48 0 586 350 100 19 chr10 48295368 48295858 -97293430 + L2 LINE L2 2503 3039 -274 252 143 0 0 chr10 48296913 48296955 -97292333 + (TATATG)n Simple_repeat Simple_repeat 6 47 0 21 71 0 0 chr10 48297118 48297160 -97292128 + AT_rich Low_complexity Low_complexity 1 42 0 22 0 0 0 chr10 48297452 48297474 -97291814 + AT_rich Low_complexity Low_complexity 1 22 0 321 276 92 63 chr10 48297943 48298502 -97290786 - L1M4 LINE L1 -2694 3452 2784 229 62 12 86 chr10 48299531 48299612 -97289676 + (TA)n Simple_repeat Simple_repeat 2 76 0 2138 118 3 7 chr10 48300073 48300370 -97288918 + AluSx SINE Alu 1 296 -16 499 275 52 38 chr10 48300622 48300833 -97288455 + L2 LINE L2 3100 3313 0 189 307 10 69 chr10 48301206 48301307 -97287981 - L2 LINE L2 -1 3271 3177 1392 191 109 39 chr10 48301703 48302167 -97287121 + L1MD2 LINE L1 5783 6234 -8 734 263 115 64 chr10 48302576 48303061 -97286227 - L1ME4a LINE L1 -273 5848 5335 7360 200 53 20 chr10 48303136 48303675 -97285613 - L1M4 LINE L1 -400 5784 5264 417 39 0 0 chr10 48303675 48303726 -97285562 + (TA)n Simple_repeat Simple_repeat 2 52 0 7360 200 53 20 chr10 48303726 48304218 -97285070 - L1M4 LINE L1 -920 5264 4790 1928 155 3 7 chr10 48304218 48304521 -97284767 - AluJo SINE Alu -10 302 1 7360 200 53 20 chr10 48304521 48305899 -97283389 - L1M4 LINE L1 -1394 4790 3291 27 19 0 57 chr10 48305906 48305959 -97283329 + AT_rich Low_complexity Low_complexity 1 50 0 437 0 19 0 chr10 48306502 48306555 -97282733 + (TCTA)n Simple_repeat Simple_repeat 2 55 0 2056 148 3 0 chr10 48307333 48307637 -97281651 + AluJb SINE Alu 1 305 -7 532 221 55 8 chr10 48307770 48307897 -97281391 - MIR SINE MIR -56 206 74 195 266 101 83 chr10 48308051 48308160 -97281128 - L3 LINE CR1 -4 1573 1463 269 208 21 73 chr10 48308764 48308860 -97280428 - MIR SINE MIR -90 172 82 234 333 0 0 chr10 48309140 48309200 -97280088 + L1MC/D LINE L1 5507 5566 -2242 2074 125 3 3 chr10 48309225 48309520 -97279768 - AluSc SINE Alu -9 300 6 196 313 16 0 chr10 48309531 48309595 -97279693 - MER5A DNA MER1_type -124 65 1 1900 183 53 15 chr10 48309983 48310381 -97278907 - MER31A LTR ERV1 -72 413 1 438 83 14 0 chr10 48311157 48311229 -97278059 - AluSq SINE Alu -1 310 238 1954 88 4 4 chr10 48311329 48311580 -97277708 - AluSq SINE Alu -62 251 1 1824 125 14 0 chr10 48312189 48312470 -97276818 - AluJb SINE Alu -17 295 11 21 0 0 0 chr10 48313935 48313956 -97275332 + AT_rich Low_complexity Low_complexity 1 21 0 2308 71 17 17 chr10 48314473 48314769 -97274519 + AluY SINE Alu 1 296 -15 1870 157 0 22 chr10 48315267 48315586 -97273702 - AluSx SINE Alu 0 312 1 184 29 29 29 chr10 48315597 48315631 -97273657 + (TTTTG)n Simple_repeat Simple_repeat 5 38 0 1593 172 3 24 chr10 48315634 48315924 -97273364 - AluJb SINE Alu -28 284 1 1932 248 43 11 chr10 48315924 48316158 -97273130 - L1M4 LINE L1 -3363 2783 2558 1474 179 0 4 chr10 48316158 48316409 -97272879 + AluJb SINE Alu 1 250 -62 1932 248 43 11 chr10 48316409 48316735 -97272553 - L1M4 LINE L1 -3588 2558 2205 840 252 90 9 chr10 48316953 48317237 -97272051 + L1ME2 LINE L1 5321 5635 -529 * 6893 129 11 6 chr10 48317218 48318379 -97270909 + L1MA3 LINE L1 5135 6305 0 859 246 63 22 chr10 48318384 48318652 -97270636 + L1ME2 LINE L1 5624 5902 -262 2247 131 48 31 chr10 48318661 48319019 -97270269 + THE1B LTR MaLR 1 364 0 6782 148 71 5 chr10 48319019 48320164 -97269124 - Tigger3b DNA MER2_type -1804 1224 1 253 194 11 118 chr10 48321210 48321245 -97268043 + MER94 DNA DNA 24 61 -73 925 206 110 129 chr10 48321245 48321756 -97267532 - MLT1D LTR MaLR 0 505 5 253 194 11 118 chr10 48321756 48321813 -97267475 + MER94 DNA DNA 61 106 -28 1994 150 0 0 chr10 48321868 48322161 -97267127 + AluSx SINE Alu 1 293 -19 1146 152 18 41 chr10 48322344 48322659 -97266629 - THE1C LTR MaLR 0 364 1 629 258 184 37 chr10 48323414 48323844 -97265444 + MLT1G1 LTR MaLR 84 576 -19 499 259 44 0 chr10 48324259 48324394 -97264894 - L1ME3A LINE L1 -4 6166 6026 277 277 62 27 chr10 48324966 48325139 -97264149 - L2 LINE L2 -340 2932 2743 556 258 160 104 chr10 48325155 48325819 -97263469 + MER21B LTR ERV1 3 703 -160 1532 194 85 10 chr10 48326435 48326824 -97262464 + MER31A LTR ERV1 64 661 0 356 214 36 0 chr10 48327070 48327154 -97262134 + LTR67 LTR ERVL 458 544 -13 337 208 217 42 chr10 48327189 48327309 -97261979 + L2 LINE L2 3167 3307 -6 285 186 14 29 chr10 48327748 48327818 -97261470 - MLT1L LTR MaLR -535 80 12 239 368 94 5 chr10 48327850 48328051 -97261237 - L2 LINE L2 -218 3054 2836 30 0 0 0 chr10 48329368 48329398 -97259890 + GC_rich Low_complexity Low_complexity 1 30 0 677 246 84 14 chr10 48329667 48329882 -97259406 + L1ME1 LINE L1 5748 5977 -187 228 116 0 0 chr10 48329883 48329926 -97259362 + MADE1 DNA Mariner 1 43 -37 451 225 39 34 chr10 48329954 48330132 -97259156 + L1ME1 LINE L1 5985 6163 -3 245 263 0 0 chr10 48330133 48330190 -97259098 - L1ME3A LINE L1 -2065 5720 5664 1350 200 34 83 chr10 48330332 48330717 -97258571 - MLT1E2 LTR MaLR -260 366 1 3710 218 54 33 chr10 48330725 48332906 -97256382 - L1M4c LINE L1 -3427 3217 893 320 318 28 9 chr10 48333814 48333921 -97255367 + MIR SINE MIR 36 144 -118 183 80 0 0 chr10 48334323 48334348 -97254940 + (TTTC)n Simple_repeat Simple_repeat 2 26 0 549 280 33 11 chr10 48334630 48334812 -97254476 + MIR SINE MIR 22 207 -55 2183 120 3 3 chr10 48335199 48335500 -97253788 - AluSx SINE Alu -11 301 1 4464 244 44 60 chr10 48335500 48337160 -97252128 - L1MDa LINE L1 -2418 3797 2164 1066 215 85 0 chr10 48337260 48337530 -97251758 - L1MDa LINE L1 -4336 2060 1768 666 272 161 0 chr10 48337547 48337771 -97251517 - ERVL-B1 LTR ERVL -5429 335 76 24 32 0 0 chr10 48337796 48337827 -97251461 + AT_rich Low_complexity Low_complexity 1 31 0 252 0 0 0 chr10 48337842 48337870 -97251418 + (TG)n Simple_repeat Simple_repeat 2 29 0 636 237 137 72 chr10 48337871 48338149 -97251139 - MLT2B1 LTR ERVL -74 446 151 1373 311 55 24 chr10 48338159 48339113 -97250175 - L1MDa LINE L1 -4961 1435 453 1627 131 139 74 chr10 48339166 48339518 -97249770 - THE1C LTR MaLR 0 375 1 537 92 13 0 chr10 48339555 48339631 -97249657 - MSTD LTR MaLR -319 77 1 1131 97 0 0 chr10 48339999 48340144 -97249144 + AluSg SINE Alu 1 145 -165 3398 231 26 31 chr10 48340255 48341068 -97248220 - L1M4 LINE L1 -5463 1079 271 297 0 0 0 chr10 48341095 48341128 -97248160 + (TG)n Simple_repeat Simple_repeat 2 34 0 692 185 0 17 chr10 48341128 48341247 -97248041 - FLAM_C SINE Alu -26 117 1 1103 230 21 4 chr10 48341255 48341494 -97247794 - L1M4 LINE L1 -6286 256 14 307 353 97 46 chr10 48341594 48341832 -97247456 - HAL1b LINE L1 -978 370 121 443 271 127 51 chr10 48341932 48342168 -97247120 - MIR SINE MIR -7 255 2 320 350 21 10 chr10 48342317 48342511 -97246777 - MER117 DNA MER1_type 0 197 2 2221 218 22 134 chr10 48342769 48343845 -97245443 + L1 LINE L1 2634 3589 -2557 299 260 33 3 chr10 48345079 48345178 -97244110 - MIR SINE MIR -85 123 16 1025 186 76 21 chr10 48346703 48346939 -97242349 - MER33 DNA MER1_type -71 253 5 21 0 0 0 chr10 48347258 48347279 -97242009 + AT_rich Low_complexity Low_complexity 1 21 0 3882 153 50 8 chr10 48347404 48348066 -97241222 - L1MC1 LINE L1 -67 6266 5577 58 47 0 0 chr10 48349024 48349110 -97240178 + AT_rich Low_complexity Low_complexity 1 86 0 237 132 0 0 chr10 48349226 48349264 -97240024 + (TC)n Simple_repeat Simple_repeat 2 39 0 244 211 66 40 chr10 48349345 48349421 -97239867 + MIR SINE MIR 109 186 -76 236 280 80 24 chr10 48349404 48349529 -97239759 - L2 LINE L2 -5 3267 3136 * 580 291 45 10 chr10 48350119 48350318 -97238970 - MIR SINE MIR -55 207 2 183 80 0 0 chr10 48350584 48350609 -97238679 + (GAAA)n Simple_repeat Simple_repeat 2 26 0 353 310 35 9 chr10 48351003 48351119 -97238169 - MIR SINE MIR -108 154 36 235 295 39 0 chr10 48351828 48351906 -97237382 + MIR SINE MIR 116 196 -66 524 341 14 27 chr10 48352619 48353059 -97236229 + HAL1 LINE L1 833 1266 -1241 906 304 90 24 chr10 48353068 48353521 -97235767 - LTR33 LTR ERVL -2 519 13 216 0 0 0 chr10 48353650 48353674 -97235614 + (A)n Simple_repeat Simple_repeat 1 24 0 402 272 69 78 chr10 48353674 48353955 -97235333 + HAL1 LINE L1 1427 1706 -801 1776 138 95 20 chr10 48353955 48354304 -97234984 - THE1C LTR MaLR 0 375 1 402 272 69 78 chr10 48354304 48354382 -97234906 + HAL1 LINE L1 1706 1783 -724 1410 305 35 35 chr10 48354383 48354918 -97234370 + ERVL LTR ERVL 2271 2805 -2959 1517 245 114 5 chr10 48355276 48356230 -97233058 + L1MC3 LINE L1 6493 7541 -244 189 138 0 0 chr10 48356672 48356701 -97232587 + MIR SINE MIR 117 145 -117 253 191 30 12 chr10 48358067 48358147 -97231141 - MLT1I LTR MaLR -266 143 94 270 0 0 0 chr10 48358579 48358609 -97230679 + (TG)n Simple_repeat Simple_repeat 2 31 0 2048 127 0 3 chr10 48358733 48359032 -97230256 + AluSx SINE Alu 1 298 -14 2464 131 15 10 chr10 48359033 48359431 -97229857 + MER57A LTR ERV1 4 403 0 10023 123 14 22 chr10 48359431 48359835 -97229453 + MER57A-int LTR ERV1 1 407 -7130 2276 84 10 3 chr10 48359835 48360145 -97229143 - AluSq SINE Alu -1 312 1 10023 123 14 22 chr10 48360145 48360253 -97229035 + MER57A-int LTR ERV1 407 514 -7023 2374 56 3 7 chr10 48360253 48360556 -97228732 - AluY SINE Alu -9 302 1 10023 123 14 22 chr10 48360556 48361600 -97227688 + MER57A-int LTR ERV1 514 1546 -5991 * 20035 102 36 24 chr10 48361594 48363304 -97225984 + MER57A-int LTR ERV1 1939 3707 -3830 2059 131 3 0 chr10 48363304 48363609 -97225679 + AluSx SINE Alu 1 306 -6 20035 102 36 24 chr10 48363609 48364992 -97224296 + MER57A-int LTR ERV1 3707 5071 -2466 2263 202 60 78 chr10 48364987 48366245 -97223043 + MER31-int LTR ERV1 1534 2506 -2365 * 260 167 0 0 chr10 48366376 48366424 -97222864 + MER31-int LTR ERV1 2429 2476 -4282 753 172 10 81 chr10 48366508 48366717 -97222571 + MER31-int LTR ERV1 3536 3729 -2869 1472 195 89 109 chr10 48366801 48367825 -97221463 + MER31-int LTR ERV1 2477 4766 -1565 1904 85 35 0 chr10 48367833 48368091 -97221197 + AluY SINE Alu 1 267 -44 991 150 0 0 chr10 48368097 48368244 -97221044 + AluSg/x SINE Alu 143 289 -21 1009 176 61 33 chr10 48368249 48368494 -97220794 + MER31-int LTR ERV1 3477 3728 -1208 908 125 0 28 chr10 48368495 48368639 -97220649 + AluSq/x SINE Alu 1 140 -172 184 347 87 36 chr10 48369251 48369447 -97219841 - L2 LINE L2 -254 3059 2854 2555 109 22 6 chr10 48369515 48369873 -97219415 - THE1B LTR MaLR 0 364 1 1207 212 8 10 chr10 48370005 48370331 -97218957 + MLT1A1 LTR MaLR 1 363 -2 1811 123 56 0 chr10 48372695 48372979 -97216309 - AluSx SINE Alu -12 300 1 309 169 0 0 chr10 48373404 48373463 -97215825 + CT-rich Low_complexity Low_complexity 2 60 0 2088 106 7 3 chr10 48373498 48373801 -97215487 - AluSg SINE Alu -6 304 1 1391 115 5 0 chr10 48375025 48375225 -97214063 - AluSq SINE Alu -10 303 103 4609 92 1 63 chr10 48376148 48376874 -97212414 + L1PA13 LINE L1 5482 6162 -1 35 54 0 0 chr10 48376874 48376930 -97212358 + AT_rich Low_complexity Low_complexity 1 56 0 252 385 0 0 chr10 48376930 48377034 -97212254 - MIR3 SINE MIR -7 201 98 3893 152 49 12 chr10 48377890 48378567 -97210721 + L1MC1 LINE L1 5577 6278 -55 21 0 0 0 chr10 48378679 48378700 -97210588 + AT_rich Low_complexity Low_complexity 1 21 0 235 224 0 0 chr10 48379037 48379086 -97210202 + L1MC1 LINE L1 6270 6318 -15 1013 191 76 21 chr10 48379089 48379325 -97209963 - MER33 DNA MER1_type -71 253 5 21 0 0 0 chr10 48379644 48379665 -97209623 + AT_rich Low_complexity Low_complexity 1 21 0 877 225 42 43 chr10 48381386 48381803 -97207485 - MLT1A1 LTR MaLR -2 363 1 2318 171 10 76 chr10 48382032 48382530 -97206758 - MLT1C LTR MaLR -2 465 1 260 340 13 20 chr10 48382892 48383045 -97206243 + LTR16C LTR ERVL 336 487 -4 187 319 59 42 chr10 48383077 48383196 -97206092 + L2 LINE L2 2715 2835 -479 238 344 240 10 chr10 48383212 48383404 -97205884 + MIR SINE MIR 25 260 -2 2233 298 137 14 chr10 48383568 48383815 -97205473 - L2 LINE L2 0 3313 3098 1698 175 0 14 chr10 48383815 48384107 -97205181 - AluJb SINE Alu -24 288 1 2233 298 137 14 chr10 48384107 48385156 -97204132 - L2 LINE L2 -215 3098 1853 787 154 23 0 chr10 48385191 48385321 -97203967 + FLAM_C SINE Alu 1 133 0 1041 169 4 94 chr10 48385328 48385582 -97203706 + AluJo SINE Alu 82 312 0 232 160 20 20 chr10 48385583 48385633 -97203655 - L2 LINE L2 -1514 1800 1751 300 163 0 0 chr10 48385861 48385910 -97203378 + MIR SINE MIR 63 111 -151 295 156 0 0 chr10 48386376 48386421 -97202867 + L2 LINE L2 3223 3267 -5 434 191 103 40 chr10 48386728 48386854 -97202434 - MER94 DNA DNA 0 134 1 673 234 79 131 chr10 48387007 48387679 -97201609 + L1ME4a LINE L1 5485 6121 0 255 272 43 11 chr10 48387964 48387990 -97201298 + L1ME LINE L1 5803 5827 -294 2027 103 3 35 chr10 48387990 48388302 -97200986 + AluSq SINE Alu 1 302 -11 255 272 43 11 chr10 48388302 48388367 -97200921 + L1ME LINE L1 5827 5897 -224 341 231 205 8 chr10 48388603 48388736 -97200552 - MER5A DNA MER1_type 0 189 20 1778 202 31 59 chr10 48388974 48389430 -97199858 + LTR47B LTR ERVL 1 443 0 649 310 93 9 chr10 48392548 48392774 -97196514 - MIR SINE MIR 0 262 18 232 330 29 10 chr10 48393196 48393299 -97195989 + L2 LINE L2 2865 2969 -303 562 301 16 16 chr10 48393462 48393648 -97195640 - MER5A DNA MER1_type -2 187 2 1585 141 0 0 chr10 48393845 48394079 -97195209 + AluSg/x SINE Alu 65 298 -14 350 343 93 34 chr10 48394472 48394889 -97194399 - L2 LINE L2 -5 3267 2826 1339 107 51 5 chr10 48445814 48446011 -97143277 + THE1A LTR MaLR 150 355 0 2542 123 35 14 chr10 48446011 48446433 -97142855 + THE1A-int LTR MaLR 1 431 -1149 183 244 51 64 chr10 48447224 48447302 -97141986 - L2 LINE L2 -18 3295 3219 2135 120 0 7 chr10 48447376 48447675 -97141613 - AluY SINE Alu -14 297 1 1703 173 79 26 chr10 48448761 48449103 -97140185 - THE1B LTR MaLR 0 364 5 2498 224 38 0 chr10 48449450 48449954 -97139334 - L1PA13 LINE L1 -6264 523 1 1684 240 53 7 chr10 48449967 48450529 -97138759 + L1 LINE L1 4222 4809 -1337 490 100 14 0 chr10 48450665 48450735 -97138553 - AluS SINE Alu -240 72 2 227 316 92 0 chr10 48451060 48451136 -97138152 - MIR SINE MIR -68 194 112 3570 230 130 15 chr10 48454258 48455315 -97133973 - MER69B DNA AcHobo -48 1178 1 1778 147 21 4 chr10 48455929 48456208 -97133080 + AluJo SINE Alu 6 289 -23 346 306 0 0 chr10 48457079 48457187 -97132101 + MIR SINE MIR 124 231 -31 910 296 53 17 chr10 48457984 48458339 -97130949 + L1ME4a LINE L1 5539 5906 -215 327 236 97 0 chr10 48458342 48458414 -97130874 + MER3 DNA MER1_type 2 80 -129 2554 150 8 0 chr10 48458425 48458819 -97130469 - MER101 LTR ERV1 -2 472 76 486 60 24 12 chr10 48458819 48458903 -97130385 + (TTTA)n Simple_repeat Simple_repeat 4 88 0 490 253 213 46 chr10 48458930 48459254 -97130034 - MLT1J2 LTR MaLR -28 422 45 1960 124 29 10 chr10 48459779 48460093 -97129195 - L1PA16 LINE L1 -9 6157 5838 2086 165 0 15 chr10 48460093 48460487 -97128801 + L1 LINE L1 4300 4687 -1459 630 88 0 0 chr10 48460487 48460567 -97128721 - MER101 LTR ERV1 -394 80 1 482 187 57 49 chr10 48460567 48460690 -97128598 + MER3 DNA MER1_type 86 209 0 294 254 78 49 chr10 48460740 48460882 -97128406 + L1ME4a LINE L1 5964 6109 -12 206 338 115 7 chr10 48461072 48461211 -97128077 - MIR SINE MIR -86 176 23 460 258 155 0 chr10 48461367 48461522 -97127766 + MER5A DNA MER1_type 10 188 -1 279 215 0 0 chr10 48461564 48461629 -97127659 + MIR SINE MIR 69 133 -75 211 320 78 51 chr10 48462605 48462936 -97126352 + L2 LINE L2 2633 2972 -342 5637 40 0 22 chr10 48463923 48464650 -97124638 - L1PA4 LINE L1 -49 6106 5396 608 126 0 130 chr10 48466461 48466715 -97122573 - AluSq SINE Alu -1 312 92 206 253 27 20 chr10 48467147 48467235 -97122053 + CT-rich Low_complexity Low_complexity 1 151 0 431 171 184 19 chr10 48467820 48467978 -97121310 - MLT1B LTR MaLR -206 184 1 616 276 105 109 chr10 48468138 48468652 -97120636 + MLT1K LTR MaLR 74 585 -3 194 203 0 34 chr10 48468964 48469023 -97120265 - L3 LINE CR1 -354 1223 1167 506 245 62 31 chr10 48470156 48470348 -97118940 + MER46C DNA MER2_type 11 208 -130 2350 83 0 3 chr10 48470360 48470649 -97118639 - AluSx SINE Alu -24 288 1 507 266 59 24 chr10 48470655 48470824 -97118464 + MER46C DNA MER2_type 163 337 -1 493 270 70 20 chr10 48472973 48473173 -97116115 - MIR SINE MIR -42 220 11 291 114 0 0 chr10 48473351 48473395 -97115893 + (CA)n Simple_repeat Simple_repeat 1 44 0 795 149 65 6 chr10 48474789 48474957 -97114331 + L1MB7 LINE L1 6007 6184 0 234 250 0 0 chr10 48475516 48475572 -97113716 + (CA)n Simple_repeat Simple_repeat 2 57 0 21 36 0 0 chr10 48475584 48475612 -97113676 + AT_rich Low_complexity Low_complexity 1 28 0 255 217 217 0 chr10 48475821 48475904 -97113384 - L2 LINE L2 -20 3293 3193 21 36 0 0 chr10 48476035 48476063 -97113225 + AT_rich Low_complexity Low_complexity 1 28 0 180 0 0 0 chr10 48476299 48476319 -97112969 + (TGAA)n Simple_repeat Simple_repeat 1 20 0 38 39 0 39 chr10 48477160 48477238 -97112050 + GC_rich Low_complexity Low_complexity 1 75 0 445 241 68 25 chr10 48477964 48478126 -97111162 + L1ME4a LINE L1 5951 6119 -2 180 271 0 0 chr10 48478324 48478372 -97110916 - L2 LINE L2 -1 3312 3265 605 298 170 50 chr10 48478593 48479418 -97109870 - L2 LINE L2 -373 2941 2018 802 211 57 17 chr10 48481094 48481269 -97108019 + MER5A DNA MER1_type 4 185 -4 2166 117 0 0 chr10 48481352 48481657 -97107631 + AluSg SINE Alu 1 305 0 295 256 0 35 chr10 48481698 48481784 -97107504 - MER5B DNA MER1_type -95 83 1 1599 199 52 33 chr10 48481977 48482167 -97107121 - MLT1A2 LTR MaLR 0 374 189 543 56 0 0 chr10 48482167 48482238 -97107050 + (GA)n Simple_repeat Simple_repeat 1 71 0 1599 199 52 33 chr10 48482238 48482414 -97106874 - MLT1A2 LTR MaLR -185 189 1 1741 150 7 34 chr10 48483434 48483727 -97105561 + AluJb SINE Alu 1 285 -27 3744 220 62 49 chr10 48485428 48486434 -97102854 + MER45R DNA AcHobo 1 1019 -562 2868 174 29 43 chr10 48486560 48487215 -97102073 + MER45R DNA AcHobo 936 1581 0 207 100 0 0 chr10 48487246 48487276 -97102012 + (GTATG)n Simple_repeat Simple_repeat 5 34 0 271 156 22 0 chr10 48487637 48487682 -97101606 - MSTB1 LTR MaLR 0 432 387 427 184 18 0 chr10 48488571 48488673 -97100615 + (CA)n Simple_repeat Simple_repeat 2 108 -4 1838 112 175 16 chr10 48488673 48488987 -97100301 + THE1B LTR MaLR 1 364 0 427 184 18 0 chr10 48488987 48488993 -97100295 + (CA)n Simple_repeat Simple_repeat 108 112 0 1026 157 6 0 chr10 48489211 48489370 -97099918 - Tigger3(Golem) DNA MER2_type -1 3028 2869 1135 123 13 0 chr10 48489370 48489525 -97099763 - AluSx SINE Alu -155 157 1 2013 152 0 3 chr10 48490403 48490705 -97098583 + AluJb SINE Alu 1 301 -11 197 159 23 0 chr10 48490748 48490792 -97098496 + CT-rich Low_complexity Low_complexity 2 46 0 207 100 0 0 chr10 48490970 48491000 -97098288 + (TA)n Simple_repeat Simple_repeat 2 31 0 204 182 0 0 chr10 48491243 48491287 -97098001 + CT-rich Low_complexity Low_complexity 2 45 0 614 201 11 52 chr10 48491606 48491780 -97097508 + L1M4 LINE L1 4457 4623 -1523 1066 183 5 25 chr10 48492058 48492255 -97097033 + AluJo SINE Alu 85 277 -35 258 32 0 0 chr10 48492262 48492293 -97096995 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 893 240 141 52 chr10 48492523 48493027 -97096261 + MLT1H LTR MaLR 1 549 0 258 287 50 10 chr10 48493727 48493828 -97095460 - MIR SINE MIR -79 183 79 2196 124 140 8 chr10 48493955 48494333 -97094955 - MSTA LTR MaLR 0 428 1 184 167 83 0 chr10 48495003 48495051 -97094237 - MIR SINE MIR -146 116 65 512 219 8 34 chr10 48496996 48497115 -97092173 + MIR SINE MIR 36 151 -111 519 17 0 0 chr10 48497130 48497190 -97092098 + (TG)n Simple_repeat Simple_repeat 2 61 0 306 259 0 12 chr10 48497307 48497388 -97091900 - L2 LINE L2 -3 3310 3231 481 259 154 12 chr10 48497485 48497744 -97091544 + MLT1L LTR MaLR 81 376 -239 1113 294 180 32 chr10 48497896 48498523 -97090765 - L2 LINE L2 -71 3242 2709 185 0 40 0 chr10 48498523 48498548 -97090740 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 1113 294 180 32 chr10 48498548 48499081 -97090207 - L2 LINE L2 -604 2709 1906 212 317 195 23 chr10 48499167 48499552 -97089736 - L2 LINE L2 -1809 1505 1055 642 253 46 34 chr10 48499568 48499805 -97089483 - MIR SINE MIR -21 241 2 682 234 0 19 chr10 48500016 48500170 -97089118 - MLT1J2 LTR MaLR -299 151 1 624 238 85 58 chr10 48500172 48500466 -97088822 - L2 LINE L2 -2280 1034 733 916 194 28 55 chr10 48500539 48500756 -97088532 - MER115 DNA AcHobo 0 693 483 4944 143 35 24 chr10 48500969 48501814 -97087474 + ERVL-B2 LTR ERVL 4580 5434 -330 2503 129 51 18 chr10 48501931 48502382 -97086906 + ERVL-B2 LTR ERVL 5249 5714 -50 407 167 13 0 chr10 48502443 48502521 -97086767 + MLT2B2 LTR ERVL 1 79 -436 2168 127 48 28 chr10 48502522 48502877 -97086411 + THE1B LTR MaLR 1 362 -2 11921 86 0 34 chr10 48502879 48503451 -97085837 + THE1B-int LTR MaLR 1 591 -989 2543 70 0 20 chr10 48503451 48503794 -97085494 + L1PA8 LINE L1 5836 6171 -1 11921 86 0 34 chr10 48503794 48504849 -97084439 + THE1B-int LTR MaLR 591 1573 -7 2225 121 53 28 chr10 48504855 48505210 -97084078 + THE1B LTR MaLR 1 364 0 1478 209 166 5 chr10 48505210 48505578 -97083710 + MLT2B2 LTR ERVL 76 502 -13 23 0 0 0 chr10 48505688 48505711 -97083577 + AT_rich Low_complexity Low_complexity 1 23 0 6136 171 9 3 chr10 48505725 48507625 -97081663 + L1PA14 LINE L1 4249 6148 -13 33 25 0 0 chr10 48507678 48507718 -97081570 + AT_rich Low_complexity Low_complexity 1 40 0 363 248 20 10 chr10 48508035 48508136 -97081152 - MER5A DNA MER1_type -25 164 63 336 302 29 14 chr10 48508041 48508180 -97081108 + MER5A DNA MER1_type 43 183 -6 * 907 297 78 36 chr10 48508527 48508947 -97080341 - L1MC4a LINE L1 -1886 5922 5482 2438 69 0 0 chr10 48508947 48509238 -97080050 - AluY SINE Alu -20 291 1 907 297 78 36 chr10 48509238 48509255 -97080033 - L1MC4a LINE L1 -2326 5482 5467 571 341 27 17 chr10 48510276 48510533 -97078755 + MIR SINE MIR 6 262 0 381 328 53 41 chr10 48510989 48511391 -97077897 - L2 LINE L2 -214 3058 2645 4365 185 34 7 chr10 48511489 48512338 -97076950 + MER63C DNA MER1_type 57 928 -2 193 176 319 22 chr10 48512740 48512831 -97076457 - MIR SINE MIR -144 118 1 484 305 102 48 chr10 48513419 48514019 -97075269 - L2 LINE L2 -418 2896 2265 455 256 111 29 chr10 48514117 48514289 -97074999 - L1ME LINE L1 -372 5749 5564 3084 230 47 43 chr10 48515680 48516613 -97072675 - L1MD3 LINE L1 -38 7957 5269 1763 180 29 14 chr10 48516646 48517150 -97072138 - L1MB7 LINE L1 -203 6399 5566 2394 239 194 11 chr10 48517150 48518022 -97071266 - L1MDa LINE L1 -5090 1450 420 * 7156 208 55 74 chr10 48518020 48518250 -97071038 - L1MB7 LINE L1 -1231 5333 5100 6045 125 4 7 chr10 48518250 48519730 -97069558 - L1PA14 LINE L1 -3 6158 4679 7156 208 55 74 chr10 48519730 48521710 -97067578 - L1MB7 LINE L1 -1464 5100 3084 883 146 0 8 chr10 48521710 48521881 -97067407 + AluSg/x SINE Alu 157 326 0 7156 208 55 74 chr10 48521881 48524023 -97065265 - L1MB7 LINE L1 -3480 3084 821 1371 201 228 35 chr10 48524024 48524423 -97064865 + MLT2B1 LTR ERVL 5 480 -40 260 93 0 37 chr10 48524433 48524487 -97064801 + (TCTA)n Simple_repeat Simple_repeat 2 53 0 533 194 8 31 chr10 48524487 48524616 -97064672 - L1MCa LINE L1 -5100 1464 1339 314 113 75 0 chr10 48524640 48524693 -97064595 + MLT2B2 LTR ERVL 459 515 0 843 234 68 21 chr10 48524693 48524928 -97064360 - L1MCa LINE L1 -5217 828 583 270 56 0 0 chr10 48524977 48525013 -97064275 + (CA)n Simple_repeat Simple_repeat 1 36 0 190 167 125 69 chr10 48525277 48525349 -97063939 + MIR SINE MIR 72 147 -115 775 266 146 3 chr10 48525597 48525947 -97063341 - MER113 DNA MER1_type? -120 401 2 266 335 77 13 chr10 48526056 48526211 -97063077 - MIR SINE MIR -47 215 51 290 245 9 57 chr10 48526839 48526945 -97062343 - MIR SINE MIR -88 174 74 1990 135 0 43 chr10 48527056 48527382 -97061906 + AluSx SINE Alu 1 312 0 235 217 43 0 chr10 48527388 48527434 -97061854 + MLT1D LTR MaLR 23 70 -435 983 238 84 87 chr10 48527448 48527746 -97061542 + MLT1D LTR MaLR 171 505 0 360 310 137 41 chr10 48528706 48529145 -97060143 + L2 LINE L2 2826 3306 -7 742 242 137 0 chr10 48529790 48530001 -97059287 + MIR SINE MIR 2 241 -21 824 262 19 19 chr10 48530832 48531095 -97058193 - L1M4c LINE L1 -4550 1834 1572 441 211 0 0 chr10 48531171 48531261 -97058027 - L1M4c LINE L1 -4804 1580 1491 * 597 214 77 16 chr10 48531258 48531440 -97057848 - L1M4 LINE L1 -1076 5070 4878 290 149 0 46 chr10 48531699 48531786 -97057502 + (GAAAA)n Simple_repeat Simple_repeat 3 85 0 210 324 0 0 chr10 48532652 48532726 -97056562 + (TTTA)n Simple_repeat Simple_repeat 3 76 0 192 282 24 12 chr10 48532748 48532833 -97056455 - L2 LINE L2 -2 3270 3185 2148 116 3 32 chr10 48533550 48533860 -97055428 + AluSx SINE Alu 1 301 -11 2243 100 0 29 chr10 48533953 48534264 -97055024 + AluSq SINE Alu 6 307 -6 253 231 0 0 chr10 48534720 48534772 -97054516 - LTR41 LTR ERVL -617 156 105 273 262 50 50 chr10 48535702 48535841 -97053447 + MIR SINE MIR 51 188 -62 303 291 155 7 chr10 48535890 48536038 -97053250 + L1ME LINE L1 5577 5746 -375 579 207 41 30 chr10 48538035 48538204 -97051084 - MER117 DNA MER1_type -20 177 7 475 231 0 0 chr10 48538876 48538984 -97050304 + MIR SINE MIR 138 245 -17 189 107 0 0 chr10 48538988 48539016 -97050272 + (TAA)n Simple_repeat Simple_repeat 2 29 0 203 183 9 0 chr10 48539073 48539126 -97050162 - MIR SINE MIR -63 145 93 536 247 115 65 chr10 48539264 48539543 -97049745 - MLT1L LTR MaLR -114 501 209 429 279 7 14 chr10 48539877 48540024 -97049264 - MER117 DNA MER1_type 0 197 52 1937 144 0 27 chr10 48540306 48540605 -97048683 + AluSx SINE Alu 1 291 -21 215 154 26 0 chr10 48540760 48540799 -97048489 + CT-rich Low_complexity Low_complexity 4 43 0 675 197 53 26 chr10 48541005 48541157 -97048131 + MER45A DNA AcHobo 1 156 -22 184 309 12 24 chr10 48541747 48541831 -97047457 - L2 LINE L2 -50 3222 3140 748 244 24 47 chr10 48542442 48542655 -97046633 - MER3 DNA MER1_type 0 209 2 715 211 112 14 chr10 48542955 48543170 -97046118 - LTR16A1 LTR ERVL 0 457 221 266 151 38 0 chr10 48543170 48543223 -97046065 + MER96 DNA MER1_type? 3 57 -118 375 271 90 13 chr10 48544705 48544860 -97044428 - MIR SINE MIR -76 186 20 1061 257 51 59 chr10 48545286 48545811 -97043477 - MLT1H LTR MaLR -16 533 13 210 252 39 158 chr10 48547401 48547528 -97041760 + MIR SINE MIR 60 171 -91 483 266 63 94 chr10 48548360 48548691 -97040597 - L2 LINE L2 -27 3286 2966 1939 258 108 66 chr10 48550189 48551033 -97038255 - MER45C DNA AcHobo -24 929 51 198 294 183 16 chr10 48551140 48551266 -97038022 + MER5B DNA MER1_type 29 175 -3 603 299 40 5 chr10 48552060 48552261 -97037027 + MIR SINE MIR 40 247 -15 562 222 52 121 chr10 48552916 48553394 -97035894 - MER65A LTR ERV1 0 445 1 847 291 25 4 chr10 48553394 48553631 -97035657 - MER65A-int LTR ERV1 0 4871 4630 4111 224 87 67 chr10 48553673 48556287 -97033001 - MER65A-int LTR ERV1 -977 3894 1679 650 212 98 83 chr10 48556411 48556830 -97032458 - MER65A-int LTR ERV1 -3269 1667 1243 321 190 80 102 chr10 48556927 48557064 -97032224 - MER34-int LTR ERV1 -4809 1522 1389 658 291 122 43 chr10 48557112 48557579 -97031709 - MER34-int LTR ERV1 -5759 572 69 834 192 103 44 chr10 48557654 48558112 -97031176 - MER34 LTR ERV1 0 542 27 359 230 43 86 chr10 48558889 48559076 -97030212 - MER65A LTR ERV1 0 445 267 403 235 61 9 chr10 48559257 48559372 -97029916 - MER65B LTR ERV1 -410 121 1 1466 235 24 19 chr10 48560544 48560914 -97028374 - MLT1A2 LTR MaLR 0 374 3 1080 153 0 0 chr10 48562411 48562747 -97026541 + (TCCA)n Simple_repeat Simple_repeat 1 336 0 253 186 0 0 chr10 48562748 48562791 -97026497 + (CCCA)n Simple_repeat Simple_repeat 2 44 0 33 0 0 0 chr10 48562973 48563006 -97026282 + AT_rich Low_complexity Low_complexity 1 33 0 6475 132 10 5 chr10 48563008 48564471 -97024817 - L1PB1 LINE L1 -3 6148 4680 293 352 78 35 chr10 48564474 48564704 -97024584 - MIR SINE MIR 0 262 23 194 203 0 34 chr10 48565247 48565306 -97023982 + L3 LINE CR1 1167 1223 -354 616 276 105 109 chr10 48565618 48566132 -97023156 - MLT1K LTR MaLR -3 585 74 1887 150 62 54 chr10 48566291 48566678 -97022610 + MLT1B LTR MaLR 1 390 0 658 266 70 25 chr10 48566872 48567116 -97022172 + MER112 DNA MER1_type 1 255 -1 251 309 138 21 chr10 48567210 48567398 -97021890 + L2 LINE L2 3103 3312 -1 292 271 85 17 chr10 48567804 48567922 -97021366 + MIR SINE MIR 78 203 -59 255 182 0 0 chr10 48568212 48568256 -97021032 - MLT2D LTR ERVL 0 464 421 658 99 38 0 chr10 48568258 48568389 -97020899 + (TCTA)n Simple_repeat Simple_repeat 2 137 0 1119 211 36 106 chr10 48568389 48568777 -97020511 - MLT2D LTR ERVL -52 362 2 255 308 0 0 chr10 48569459 48569524 -97019764 - L2 LINE L2 -554 2760 2696 5261 137 22 16 chr10 48569983 48570267 -97019021 - L1MC1 LINE L1 -2 6331 6050 2162 196 26 13 chr10 48570267 48570720 -97018568 - MER65C LTR ERV1 0 461 3 5261 137 22 16 chr10 48570720 48571306 -97017982 - L1MC1 LINE L1 -283 6050 5456 243 288 85 8 chr10 48571665 48571783 -97017505 + LTR16A LTR ERVL 314 440 -10 222 318 129 12 chr10 48572109 48572279 -97017009 + MIR SINE MIR 58 247 -15 30 0 0 0 chr10 48572885 48572915 -97016373 + AT_rich Low_complexity Low_complexity 1 30 0 1293 102 6 0 chr10 48572931 48573097 -97016191 - AluSq SINE Alu -144 169 3 725 262 136 19 chr10 48574484 48574904 -97014384 - L1ME4a LINE L1 -76 6045 5577 307 229 213 0 chr10 48575181 48575303 -97013985 - MER103 DNA DNA -17 149 2 264 299 39 0 chr10 48575597 48575674 -97013614 - L1ME LINE L1 -460 5661 5582 372 103 0 0 chr10 48576506 48576564 -97012724 + (ATG)n Simple_repeat Simple_repeat 3 60 0 229 314 58 0 chr10 48577183 48577269 -97012019 + MIR3 SINE MIR 73 163 -45 3570 230 130 15 chr10 48579839 48580896 -97008392 - MER69B DNA AcHobo -48 1178 1 1743 146 21 7 chr10 48581508 48581788 -97007500 + AluJo SINE Alu 6 289 -23 346 306 0 0 chr10 48582659 48582767 -97006521 + MIR SINE MIR 124 231 -31 909 302 54 14 chr10 48583564 48583918 -97005370 + L1ME4a LINE L1 5539 5906 -215 327 236 97 0 chr10 48583921 48583993 -97005295 + MER3 DNA MER1_type 2 80 -129 2554 150 8 0 chr10 48584004 48584398 -97004890 - MER101 LTR ERV1 -2 472 76 450 62 25 12 chr10 48584398 48584478 -97004810 + (TTTA)n Simple_repeat Simple_repeat 4 84 0 555 262 215 37 chr10 48584505 48584826 -97004462 - MLT1J2 LTR MaLR -28 422 45 1960 124 29 10 chr10 48585350 48585664 -97003624 - L1PA16 LINE L1 -9 6157 5838 2039 170 0 18 chr10 48585664 48586059 -97003229 + L1 LINE L1 4300 4687 -1459 630 88 0 0 chr10 48586059 48586139 -97003149 - MER101 LTR ERV1 -394 80 1 482 187 57 49 chr10 48586139 48586262 -97003026 + MER3 DNA MER1_type 86 209 0 294 254 78 49 chr10 48586312 48586454 -97002834 + L1ME4a LINE L1 5964 6109 -12 206 338 115 7 chr10 48586647 48586786 -97002502 - MIR SINE MIR -86 176 23 460 258 155 0 chr10 48586942 48587097 -97002191 + MER5A DNA MER1_type 10 188 -1 279 215 0 0 chr10 48587139 48587204 -97002084 + MIR SINE MIR 69 133 -75 211 320 78 51 chr10 48588180 48588511 -97000777 + L2 LINE L2 2633 2972 -342 271 261 181 35 chr10 48588939 48589226 -97000062 - L1ME LINE L1 -500 5666 5338 843 223 39 22 chr10 48590255 48590484 -96998804 + MIR SINE MIR 23 255 -7 213 39 0 0 chr10 48590832 48590858 -96998430 + (CA)n Simple_repeat Simple_repeat 1 26 0 2245 100 0 26 chr10 48591990 48592300 -96996988 - AluSp SINE Alu -11 302 1 185 295 16 16 chr10 48592359 48592420 -96996868 - L2 LINE L2 -2 3270 3210 342 266 331 5 chr10 48592531 48592715 -96996573 - MIR SINE MIR -16 246 3 1166 228 121 79 chr10 48593099 48593630 -96995658 - MLT1H1 LTR MaLR -1 554 2 413 307 22 7 chr10 48594560 48594697 -96994591 + MIR SINE MIR 57 195 -67 407 283 26 0 chr10 48594913 48595026 -96994262 - L2 LINE L2 -15 3257 3142 1109 194 60 7 chr10 48595487 48595770 -96993518 - L1MB3 LINE L1 -1 6182 5885 239 292 67 25 chr10 48596016 48596136 -96993152 + L2 LINE L2 3138 3262 -10 249 339 51 8 chr10 48596915 48597033 -96992255 - MIR SINE MIR -52 210 88 3017 56 0 0 chr10 48597888 48598243 -96991045 - THE1A LTR MaLR 0 355 1 207 194 0 0 chr10 48598836 48598872 -96990416 + (TG)n Simple_repeat Simple_repeat 1 36 0 283 275 0 75 chr10 48599545 48599665 -96989623 + MIR SINE MIR 8 119 -89 1567 152 4 11 chr10 48600465 48600728 -96988560 - L1PA13 LINE L1 -2 6161 5899 2292 110 0 3 chr10 48600728 48601029 -96988259 - AluSx SINE Alu -12 300 1 267 79 0 0 chr10 48602675 48602713 -96986575 + (TG)n Simple_repeat Simple_repeat 1 38 0 180 0 0 0 chr10 48602719 48602739 -96986549 + (TA)n Simple_repeat Simple_repeat 2 21 0 304 291 43 26 chr10 48602806 48602923 -96986365 - MIR SINE MIR -56 206 88 287 295 87 29 chr10 48603093 48603321 -96985967 + MIR SINE MIR 9 247 -15 353 343 60 10 chr10 48603832 48604033 -96985255 + MIR SINE MIR 20 230 -32 232 244 122 8 chr10 48604324 48604447 -96984841 + LTR33 LTR ERVL 22 158 -363 403 277 34 24 chr10 48604565 48604771 -96984517 + LTR33 LTR ERVL 301 508 -13 958 224 95 68 chr10 48604903 48605409 -96983879 - MER39 LTR ERV1 -21 686 1 811 271 50 5 chr10 48605530 48605751 -96983537 - MIR SINE MIR -1 261 31 2275 93 3 13 chr10 48607188 48607489 -96981799 + AluY SINE Alu 1 298 -13 26 0 0 0 chr10 48608088 48608114 -96981174 + AT_rich Low_complexity Low_complexity 1 26 0 242 297 14 62 chr10 48608134 48608279 -96981009 + L1ME LINE L1 5492 5629 -533 268 218 18 0 chr10 48610736 48610791 -96978497 - MER5A DNA MER1_type -121 68 13 1040 149 47 158 chr10 48612864 48613226 -96976062 + MER33 DNA MER1_type 2 323 -1 317 233 162 38 chr10 48614071 48614281 -96975007 - LTR33 LTR ERVL -41 480 245 262 247 52 0 chr10 48614387 48614464 -96974824 - LTR33 LTR ERVL -413 108 28 1000 225 38 9 chr10 48614780 48614993 -96974295 + MER20 DNA MER1_type 1 219 0 2096 145 26 50 chr10 48616467 48616509 -96972779 - MLT2D LTR ERVL 0 414 373 216 67 0 0 chr10 48616509 48616539 -96972749 + (TG)n Simple_repeat Simple_repeat 2 31 0 2096 145 26 50 chr10 48616539 48616916 -96972372 - MLT2D LTR ERVL -41 373 5 562 292 60 29 chr10 48616930 48617211 -96972077 - LTR16A LTR ERVL -10 440 151 285 238 12 36 chr10 48617281 48617365 -96971923 + MIR SINE MIR 80 161 -101 1211 258 77 140 chr10 48617873 48619250 -96970038 - L2 LINE L2 -312 3001 1714 624 289 127 72 chr10 48619275 48619828 -96969460 - L2 LINE L2 -1867 1447 865 448 241 57 25 chr10 48619878 48620036 -96969252 + Charlie7 DNA MER1_type 2449 2611 -1 767 159 32 13 chr10 48620129 48620286 -96969002 - LTR37A LTR ERV1 0 426 267 484 175 9 26 chr10 48620278 48620392 -96968896 - LTR37A LTR ERV1 -311 115 4 * 23 0 0 0 chr10 48620677 48620700 -96968588 + AT_rich Low_complexity Low_complexity 1 23 0 768 174 15 8 chr10 48621660 48621792 -96967496 - FLAM_A SINE Alu 0 133 1 671 292 32 11 chr10 48622803 48622988 -96966300 - L3 LINE CR1 -36 1541 1353 374 332 128 5 chr10 48623924 48624135 -96965153 + MIR SINE MIR 20 256 -6 276 355 81 8 chr10 48625266 48625390 -96963898 + L2 LINE L2 2225 2357 -957 295 294 25 71 chr10 48627661 48627902 -96961386 - MIR SINE MIR -11 251 21 332 291 83 31 chr10 48628695 48628826 -96960462 - MIR SINE MIR -83 179 36 239 304 0 2 chr10 48629820 48629889 -96959399 + MIR SINE MIR 39 106 -102 194 206 73 15 chr10 48629854 48629922 -96959366 + L2 LINE L2 2168 2239 -1075 * 2495 74 0 0 chr10 48630698 48630995 -96958293 + AluY SINE Alu 1 297 -14 360 111 0 0 chr10 48631598 48631652 -96957636 + (TG)n Simple_repeat Simple_repeat 1 54 0 369 0 0 0 chr10 48632296 48632337 -96956951 + (CA)n Simple_repeat Simple_repeat 2 42 0 395 318 41 29 chr10 48632745 48633060 -96956228 + L1ME4a LINE L1 5552 5870 -251 532 272 71 12 chr10 48633913 48634082 -96955206 - MER5A DNA MER1_type -10 179 1 322 317 0 8 chr10 48634237 48634357 -96954931 + L1MD1 LINE L1 4534 4652 -1494 21 89 0 0 chr10 48634357 48634413 -96954875 + AT_rich Low_complexity Low_complexity 1 56 0 3307 203 49 20 chr10 48634414 48635746 -96953542 + L1MD1 LINE L1 4640 6014 -228 256 290 102 32 chr10 48635965 48636151 -96953137 + MLT1L LTR MaLR 410 608 -7 2413 90 0 3 chr10 48636335 48636635 -96952653 + AluSq SINE Alu 1 299 -14 690 310 27 27 chr10 48636859 48637191 -96952097 + MLT1I LTR MaLR 78 409 0 408 280 178 0 chr10 48637204 48637322 -96951966 - MIR3 SINE MIR -67 141 3 290 165 114 13 chr10 48637398 48637477 -96951811 + MER88 LTR ERVL 79 165 -299 * 1201 217 75 20 chr10 48637410 48637755 -96951533 - MER74A LTR ERVL -70 488 125 250 206 21 62 chr10 48637750 48637847 -96951441 + MER74B LTR ERVL 444 536 -86 * 3411 198 61 4 chr10 48638290 48638978 -96950310 + MER50 LTR ERV1 8 734 0 244 379 131 0 chr10 48639475 48639620 -96949668 - MER91A DNA MER1_type -32 164 1 290 278 52 31 chr10 48640422 48640519 -96948769 - L2 LINE L2 -6 3266 3168 987 208 75 112 chr10 48641171 48641546 -96947742 + MLT1A1 LTR MaLR 5 365 0 367 287 26 9 chr10 48642107 48642222 -96947066 - MIR SINE MIR -60 148 32 2113 171 57 33 chr10 48642627 48642668 -96946620 + MSTB1 LTR MaLR 1 40 -392 2295 92 0 0 chr10 48642668 48642951 -96946337 + AluSx SINE Alu 1 306 0 208 0 0 0 chr10 48642951 48642974 -96946314 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 2113 171 57 33 chr10 48642974 48643353 -96945935 + MSTB1 LTR MaLR 40 432 0 424 303 195 56 chr10 48643831 48644497 -96944791 - L1M2 LINE L1 -5383 1466 708 311 276 60 35 chr10 48644684 48644800 -96944488 - L2 LINE L2 -4 3309 3191 228 220 0 110 chr10 48644811 48644902 -96944386 - L2 LINE L2 -914 2400 2320 366 282 33 44 chr10 48645087 48645268 -96944020 - L2 LINE L2 -985 2329 2151 830 259 153 31 chr10 48645379 48645861 -96943427 - L2 LINE L2 -1582 1732 1192 241 333 0 0 chr10 48645871 48645952 -96943336 + MIR SINE MIR 161 241 -21 660 242 19 0 chr10 48646382 48646539 -96942749 - MIR SINE MIR -21 241 82 869 251 23 46 chr10 48646625 48646844 -96942444 + MIR SINE MIR 13 226 -36 473 253 30 60 chr10 48647466 48647632 -96941656 - MER5B DNA MER1_type -1 177 17 502 223 21 75 chr10 48647656 48647844 -96941444 - MER5B DNA MER1_type 0 178 1 311 268 116 0 chr10 48648084 48648196 -96941092 - MIR SINE MIR -46 216 92 764 175 27 71 chr10 48648236 48648299 -96940989 - MER5B DNA MER1_type 0 178 114 2334 106 0 0 chr10 48648299 48648602 -96940686 + AluSc SINE Alu 1 303 -6 764 175 27 71 chr10 48648602 48648721 -96940567 - MER5B DNA MER1_type -64 114 4 327 257 33 104 chr10 48648882 48649065 -96940223 - L2 LINE L2 -40 3273 3104 2266 226 40 18 chr10 48649075 48649843 -96939445 - L1ME LINE L1 -623 5612 4835 1309 234 73 0 chr10 48649842 48650240 -96939048 + L1M4 LINE L1 4087 4513 -1633 * 1372 213 41 60 chr10 48650252 48650768 -96938520 - L1ME LINE L1 -2392 3823 3318 923 184 46 10 chr10 48650839 48651035 -96938253 - MER3 DNA MER1_type 0 209 7 2954 220 100 29 chr10 48651043 48652461 -96936827 - L1MEc LINE L1 -2905 3310 1847 2612 181 24 2 chr10 48652505 48653002 -96936286 - L1MC2 LINE L1 -26 6318 5811 1318 152 0 68 chr10 48653016 48653266 -96936022 - LTR47B LTR ERVL 0 443 211 1202 185 24 68 chr10 48653290 48653630 -96935658 - L1PBa LINE L1 -5817 1046 722 1958 219 22 0 chr10 48653676 48654091 -96935197 - L1PBa LINE L1 -6284 579 156 1074 236 7 7 chr10 48654094 48654378 -96934910 - L1MC2 LINE L1 -816 5330 5047 1472 213 112 19 chr10 48654380 48654807 -96934481 + MLT1C LTR MaLR 1 467 0 3222 179 62 24 chr10 48654808 48655485 -96933803 + MLT1C-int LTR MaLR 2 704 -667 1693 163 41 89 chr10 48655479 48655871 -96933417 + MLT1C-int LTR MaLR 999 1371 0 * 667 250 75 11 chr10 48655912 48656100 -96933188 + MLT1C LTR MaLR 268 467 0 2282 239 62 16 chr10 48656100 48656859 -96932429 - L1MC2 LINE L1 -1097 5049 4256 2143 110 0 3 chr10 48656868 48657159 -96932129 - AluSx SINE Alu -22 290 1 1111 211 112 28 chr10 48657279 48657635 -96931653 - L1MC2 LINE L1 -1879 4267 3882 306 293 123 9 chr10 48657663 48657769 -96931519 + L2 LINE L2 3147 3264 -8 198 0 0 0 chr10 48658267 48658289 -96930999 + (CTG)n Simple_repeat Simple_repeat 2 23 0 1440 249 127 66 chr10 48659392 48659906 -96929382 - MER68 LTR ERV1 -17 545 1 604 259 60 37 chr10 48660240 48660544 -96928744 + LTR45 LTR ERV1 305 525 0 395 156 10 62 chr10 48661200 48661296 -96927992 - L1M4 LINE L1 -1934 4212 4122 226 309 113 65 chr10 48662348 48662516 -96926772 - L2 LINE L2 -14 3258 3083 1821 151 0 35 chr10 48663354 48663665 -96925623 - AluJo SINE Alu -12 300 1 953 231 62 75 chr10 48663697 48664161 -96925127 - LTR37B LTR ERV1 0 468 11 1668 166 43 0 chr10 48664168 48664446 -96924842 - AluJb SINE Alu -17 295 6 351 0 0 0 chr10 48664827 48664866 -96924422 + (TG)n Simple_repeat Simple_repeat 2 40 0 194 277 134 8 chr10 48665356 48665475 -96923813 - MER5A DNA MER1_type -1 188 55 358 147 9 129 chr10 48665540 48665656 -96923632 - L1ME4a LINE L1 0 6121 6020 1685 156 78 31 chr10 48665932 48666317 -96922971 - L1MA9 LINE L1 0 6312 5910 * 2834 168 23 29 chr10 48666303 48667194 -96922094 - L1M4 LINE L1 -1154 4992 4139 418 128 0 2 chr10 48667191 48667262 -96922026 - L1M4 LINE L1 -1955 4191 4120 * 2084 176 81 8 chr10 48667262 48667659 -96921629 + MSTB LTR MaLR 1 426 0 22 0 0 0 chr10 48667671 48667693 -96921595 + AT_rich Low_complexity Low_complexity 1 22 0 496 161 62 9 chr10 48667693 48667805 -96921483 + LTR37A LTR ERV1 309 426 0 3712 129 15 32 chr10 48667903 48668085 -96921203 - L1PA16 LINE L1 -5 6161 5977 2316 94 3 22 chr10 48668085 48668403 -96920885 - AluSx SINE Alu 0 312 1 3712 129 15 32 chr10 48668403 48668973 -96920315 - L1PA16 LINE L1 -189 5977 5254 978 193 14 14 chr10 48668977 48669184 -96920104 - L1PA16 LINE L1 -2465 3681 3475 1890 136 7 0 chr10 48669190 48669477 -96919811 + Tigger1 DNA MER2_type 1408 1696 -722 378 176 0 40 chr10 48669474 48669548 -96919740 + Tigger7 DNA MER2_type 2416 2486 -1 * 2728 262 125 49 chr10 48669549 48670708 -96918580 - L1MEc LINE L1 -4390 2006 662 2232 104 13 3 chr10 48670708 48671015 -96918273 - AluSg SINE Alu 0 310 1 2728 262 125 49 chr10 48671015 48671634 -96917654 - L1MEc LINE L1 -5734 662 92 250 301 97 45 chr10 48671861 48672130 -96917158 - L1M4 LINE L1 -2535 3611 3329 319 0 0 0 chr10 48672170 48672205 -96917083 - U2 snRNA snRNA -153 35 1 279 212 106 68 chr10 48672285 48672577 -96916711 - L1M4 LINE L1 -2929 3217 2915 237 83 0 0 chr10 48674462 48674498 -96914790 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 974 118 0 35 chr10 48674776 48674920 -96914368 - AluSq/x SINE Alu -174 139 1 219 290 116 0 chr10 48674959 48675028 -96914260 - MIR SINE MIR -94 114 38 277 219 22 66 chr10 48675684 48675821 -96913467 + L1M4 LINE L1 2860 2990 -3156 21 0 0 0 chr10 48677199 48677220 -96912068 + AT_rich Low_complexity Low_complexity 1 21 0 190 320 110 90 chr10 48677496 48677940 -96911348 - L2 LINE L2 -8 3264 2812 22 0 0 0 chr10 48679863 48679885 -96909403 + AT_rich Low_complexity Low_complexity 1 22 0 310 250 10 40 chr10 48679917 48680017 -96909271 + L1MC4 LINE L1 6607 6703 -1339 322 244 0 26 chr10 48680068 48680146 -96909142 - L3 LINE CR1 -11 1566 1491 21 0 0 0 chr10 48680261 48680282 -96909006 + AT_rich Low_complexity Low_complexity 1 21 0 1406 228 103 1 chr10 48680302 48680813 -96908475 - L1ME1 LINE L1 -24 6142 5555 2508 279 105 42 chr10 48680835 48682418 -96906870 - L1MCc LINE L1 -4918 1505 17 30 0 0 0 chr10 48682421 48682451 -96906837 + AT_rich Low_complexity Low_complexity 1 30 0 243 232 12 73 chr10 48682468 48682550 -96906738 - MER90 LTR ERV1 -498 77 1 811 266 139 17 chr10 48682621 48683078 -96906210 + L1ME LINE L1 5243 5771 -391 32 17 0 52 chr10 48683385 48683443 -96905845 + AT_rich Low_complexity Low_complexity 1 55 0 23 33 0 0 chr10 48683658 48683688 -96905600 + AT_rich Low_complexity Low_complexity 1 30 0 300 203 0 0 chr10 48683713 48683778 -96905510 - L1ME LINE L1 -305 5816 5752 249 322 11 11 chr10 48683835 48683922 -96905366 - L1ME LINE L1 -2160 5648 5562 1118 114 0 0 chr10 48683926 48684075 -96905213 - AluSg SINE Alu -161 149 1 672 253 45 7 chr10 48684880 48685034 -96904254 - MLT2F LTR ERVL -503 160 1 479 287 42 0 chr10 48685034 48685177 -96904111 - ERVL-F LTR ERVL -8 5756 5608 1041 227 40 11 chr10 48685257 48685534 -96903754 - ERVL-F LTR ERVL -320 5444 5160 3268 218 29 56 chr10 48685759 48686816 -96902472 - L1M4 LINE L1 -1634 4512 3484 1608 152 12 0 chr10 48686889 48687139 -96902149 - MLT1B LTR MaLR -71 319 67 1231 245 75 22 chr10 48687161 48687597 -96901691 - L1M4 LINE L1 -2655 3491 3019 1407 199 84 19 chr10 48687597 48687918 -96901370 - MER2 DNA MER2_type 0 344 3 1231 245 75 22 chr10 48687918 48688028 -96901260 - L1M4 LINE L1 -3127 3019 2916 842 162 24 6 chr10 48688027 48688194 -96901094 + L1MC3 LINE L1 6914 7083 -702 * 334 289 0 10 chr10 48688196 48688300 -96900988 + MLT1F1 LTR MaLR 24 126 -441 2719 184 32 5 chr10 48688301 48688882 -96900406 + L1MC3 LINE L1 6143 6338 -6 267 262 0 0 chr10 48688884 48688945 -96900343 - L1M4 LINE L1 -3214 2932 2872 314 167 12 0 chr10 48688958 48689042 -96900246 - L1MB2 LINE L1 -3 6168 6084 9339 214 47 27 chr10 48689065 48690203 -96899085 - L1MCa LINE L1 -1055 5886 4773 1631 133 48 58 chr10 48690203 48690497 -96898791 + AluSq SINE Alu 1 291 -22 9339 214 47 27 chr10 48690497 48692824 -96896464 - L1MCa LINE L1 -2168 4773 2343 1052 278 22 50 chr10 48692890 48693484 -96895804 - L1MCa LINE L1 -5052 1889 1313 3504 156 68 0 chr10 48693514 48694190 -96895098 + Tigger7 DNA MER2_type 13 2487 0 1024 228 154 8 chr10 48694211 48694575 -96894713 - L1MCa LINE L1 -5137 1286 870 21 0 0 0 chr10 48695258 48695279 -96894009 + AT_rich Low_complexity Low_complexity 1 21 0 289 300 41 29 chr10 48696095 48696265 -96893023 - MLT1L LTR MaLR -21 594 423 248 277 20 0 chr10 48696987 48697088 -96892200 - L1M4 LINE L1 -3286 2860 2758 23 0 0 0 chr10 48698289 48698312 -96890976 + AT_rich Low_complexity Low_complexity 1 23 0 270 221 125 0 chr10 48698357 48698461 -96890827 - L1ME LINE L1 -369 5752 5636 407 293 66 18 chr10 48698478 48698645 -96890643 - L1ME LINE L1 -2318 5490 5316 2256 63 16 28 chr10 48698645 48698962 -96890326 - AluSq SINE Alu 0 313 1 294 220 127 8 chr10 48699209 48699327 -96889961 - L1P LINE L1 -1097 5049 4918 189 333 58 23 chr10 48699652 48699739 -96889549 - MER5B DNA MER1_type 0 178 89 280 406 86 23 chr10 48699944 48700200 -96889088 + L2 LINE L2 2989 3260 -12 1935 142 61 9 chr10 48700576 48700906 -96888382 + MER7A DNA MER2_type 1 345 -1 633 248 39 13 chr10 48701373 48701526 -96887762 - MIR SINE MIR -1 261 105 1665 134 67 28 chr10 48701616 48701899 -96887389 - AluJo SINE Alu -18 294 1 299 309 58 22 chr10 48701899 48702038 -96887250 - L2 LINE L2 -1462 1852 1709 226 323 112 19 chr10 48702063 48702224 -96887064 - L2 LINE L2 -1739 1575 1400 573 292 6 41 chr10 48702298 48702469 -96886819 - L2 LINE L2 -2049 1265 1101 1769 148 67 19 chr10 48702471 48702842 -96886446 - MLT2C1 LTR ERVL -8 389 1 560 315 82 21 chr10 48702941 48703281 -96886007 - L2 LINE L2 -2401 913 553 399 299 135 34 chr10 48703291 48703498 -96885790 - L2 LINE L2 -3015 299 72 252 257 114 50 chr10 48703528 48703668 -96885620 - MER112 DNA MER1_type -6 254 106 3768 181 37 56 chr10 48703668 48703936 -96885352 - L1MB7 LINE L1 -10 6174 5902 2128 125 0 7 chr10 48703936 48704233 -96885055 - AluSx SINE Alu -16 296 2 3768 181 37 56 chr10 48704233 48704346 -96884942 - L1MB7 LINE L1 -282 5902 5788 2115 114 16 0 chr10 48704346 48704654 -96884634 - AluSp SINE Alu 0 313 1 1860 150 3 46 chr10 48704656 48704982 -96884306 - AluJo SINE Alu 0 312 1 3768 181 37 56 chr10 48704982 48705534 -96883754 - L1MB7 LINE L1 -397 5787 5266 1532 176 44 14 chr10 48705534 48705830 -96883458 - AluJo SINE Alu -7 305 1 3768 181 37 56 chr10 48705830 48706339 -96882949 - L1MB7 LINE L1 -918 5266 4749 814 118 7 15 chr10 48708690 48708826 -96880462 - L1M3e LINE L1 -6886 144 10 249 222 78 74 chr10 48708876 48709148 -96880140 - L1MC4 LINE L1 -370 7672 7296 478 278 49 94 chr10 48709212 48709435 -96879853 - L1MC4 LINE L1 -670 7372 7163 1970 103 0 0 chr10 48709435 48709687 -96879601 - AluSx SINE Alu -20 292 41 478 278 49 94 chr10 48709687 48709751 -96879537 - L1MC4 LINE L1 -879 7163 7098 5891 162 56 43 chr10 48709963 48711385 -96877903 - L1MC3 LINE L1 -1 7784 6345 190 0 67 0 chr10 48711388 48711418 -96877870 + (TTTG)n Simple_repeat Simple_repeat 3 34 0 2883 231 45 65 chr10 48711423 48712459 -96876829 - L1MB7 LINE L1 -1897 4249 3237 1630 116 8 17 chr10 48712459 48712700 -96876588 - AluSg/x SINE Alu -1 311 73 2883 231 45 65 chr10 48712700 48712850 -96876438 - L1MB7 LINE L1 -2909 3237 3086 504 251 40 85 chr10 48712846 48713023 -96876265 - L1MC4 LINE L1 -1040 7002 6741 * 658 232 86 80 chr10 48713466 48713698 -96875590 - MIR SINE MIR -27 235 1 26 0 0 0 chr10 48713962 48713988 -96875300 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr10 48714384 48714406 -96874882 + AT_rich Low_complexity Low_complexity 1 22 0 771 180 82 29 chr10 48714782 48714988 -96874300 + Charlie1b DNA MER1_type 51 267 -256 1715 322 42 37 chr10 48716031 48718089 -96871199 - BaEV-int LTR ERV1 -2099 5686 2852 385 247 88 12 chr10 48718833 48719003 -96870285 - BaEV-int LTR ERV1 -6279 370 188 370 221 125 42 chr10 48719633 48719873 -96869415 + Charlie1b DNA MER1_type 262 521 -2 1329 185 149 6 chr10 48719876 48720239 -96869049 - Charlie1b DNA MER1_type 0 2068 1654 989 178 103 16 chr10 48720235 48720477 -96868811 - Charlie1b DNA MER1_type -437 86 2062 * 312 318 101 0 chr10 48720572 48720849 -96868439 + L1M4 LINE L1 3206 3510 -2636 580 179 103 40 chr10 48720901 48721125 -96868163 - Charlie1 DNA MER1_type 0 2761 2524 296 127 36 0 chr10 48721160 48721215 -96868073 - Charlie1 DNA MER1_type -2601 160 104 10513 205 47 8 chr10 48721269 48723277 -96866011 + L1PA16 LINE L1 2318 4527 -1639 215 31 31 0 chr10 48723277 48723309 -96865979 + (CA)n Simple_repeat Simple_repeat 2 34 0 10513 205 47 8 chr10 48723309 48724990 -96864298 + L1PA16 LINE L1 4527 6142 -24 801 302 95 17 chr10 48725116 48725580 -96863708 - L1MEc LINE L1 -5875 521 22 1215 140 77 14 chr10 48725792 48726013 -96863275 + MER46A DNA MER2_type 1 235 -1 852 298 110 84 chr10 48726022 48726553 -96862735 - L2 LINE L2 -1 3271 2755 1615 179 14 4 chr10 48726553 48726859 -96862429 - AluJb SINE Alu 0 309 1 852 298 110 84 chr10 48726859 48727532 -96861756 - L2 LINE L2 -517 2755 2013 1234 235 121 32 chr10 48727532 48727995 -96861293 - MLT1D LTR MaLR 0 505 2 852 298 110 84 chr10 48727995 48728062 -96861226 - L2 LINE L2 -1259 2013 1949 28 0 0 0 chr10 48729150 48729178 -96860110 + AT_rich Low_complexity Low_complexity 1 28 0 24 67 0 0 chr10 48730233 48730278 -96859010 + AT_rich Low_complexity Low_complexity 1 45 0 23 86 0 0 chr10 48730337 48730395 -96858893 + AT_rich Low_complexity Low_complexity 1 58 0 363 257 99 26 chr10 48730558 48730710 -96858578 + L1ME3 LINE L1 6000 6162 0 372 318 95 29 chr10 48730758 48731073 -96858215 + L1MC4a LINE L1 4630 4965 -1181 757 250 93 34 chr10 48731277 48731534 -96857754 + L1MC4a LINE L1 5512 5797 -2011 1383 211 72 36 chr10 48731534 48731895 -96857393 + MLT1A2 LTR MaLR 1 374 0 757 250 93 34 chr10 48731895 48731993 -96857295 + L1MC4a LINE L1 5797 5888 -1920 377 268 39 24 chr10 48733530 48733657 -96855631 - MER5A DNA MER1_type -25 164 36 375 304 30 15 chr10 48733536 48733671 -96855617 + MER5A DNA MER1_type 43 179 -10 * 338 317 80 69 chr10 48734023 48734474 -96854814 - L1MC4a LINE L1 -1888 5920 5465 1691 176 17 9 chr10 48734691 48735276 -96854012 - L1P4 LINE L1 -667 5501 4910 1074 237 15 15 chr10 48735855 48736121 -96853167 - MLT-int LTR MaLR -943 792 527 641 115 0 0 chr10 48736159 48736255 -96853033 + MER85 DNA T2_type 44 139 0 1324 199 23 70 chr10 48736259 48736777 -96852511 - MLT-int LTR MaLR -1212 523 30 205 281 31 0 chr10 48737686 48737750 -96851538 - MIR SINE MIR -102 160 95 202 177 16 16 chr10 48737961 48738023 -96851265 + (TA)n Simple_repeat Simple_repeat 1 62 0 24 0 0 0 chr10 48739128 48739152 -96850136 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr10 48739404 48739426 -96849862 + AT_rich Low_complexity Low_complexity 1 22 0 480 309 127 43 chr10 48739758 48740341 -96848947 - L2 LINE L2 -1 3312 2677 1154 227 71 44 chr10 48741021 48741386 -96847902 + MLT1B LTR MaLR 16 390 0 669 257 160 30 chr10 48741387 48741788 -96847500 + L1ME1 LINE L1 5681 6133 -33 1910 139 69 8 chr10 48741794 48742162 -96847126 + MER7C DNA MER2_type 1 391 -211 1189 205 40 49 chr10 48742162 48742509 -96846779 - THE1B LTR MaLR 0 364 21 6591 65 10 5 chr10 48742793 48744485 -96844803 + L1PA3 LINE L1 4360 6061 -94 28 0 0 0 chr10 48746904 48746932 -96842356 + AT_rich Low_complexity Low_complexity 1 28 0 341 266 85 80 chr10 48747133 48747332 -96841956 + L1M4 LINE L1 2206 2405 -3741 1407 206 147 33 chr10 48747782 48748238 -96841050 + L1MD2 LINE L1 19 526 -6014 7579 72 4 25 chr10 48748330 48749355 -96839933 + LTR13 LTR ERVK 1 1003 -4 653 227 14 43 chr10 48749454 48749661 -96839627 + L1MD2 LINE L1 972 1172 -5368 6875 52 8 4 chr10 48749664 48751146 -96838142 - L1PA7 LINE L1 -6 6148 4659 16891 90 7 3 chr10 48751147 48753537 -96835751 + L1PA7 LINE L1 2247 4646 -1500 863 124 8 16 chr10 48753537 48753666 -96835622 - AluJo SINE Alu -12 300 173 604 168 9 0 chr10 48753666 48753773 -96835515 - AluJo SINE Alu -204 108 1 4683 238 87 23 chr10 48753773 48754014 -96835274 + L1MD2 LINE L1 1166 1390 -5150 1379 142 40 4 chr10 48754014 48754240 -96835048 - MER46A DNA MER2_type 0 236 3 4683 238 87 23 chr10 48754240 48755916 -96833372 + L1MD2 LINE L1 1390 5467 -1073 1522 172 59 36 chr10 48755916 48756422 -96832866 + L1MD2 LINE L1 6171 6737 -16 953 227 5 5 chr10 48756753 48756938 -96832350 - MER5A DNA MER1_type -3 186 2 312 269 145 57 chr10 48757129 48757491 -96831797 + L1ME3A LINE L1 667 996 -5209 2561 53 0 0 chr10 48757491 48757791 -96831497 + AluY SINE Alu 1 300 -11 312 269 145 57 chr10 48757791 48758127 -96831161 + L1ME3A LINE L1 996 1336 -4869 255 213 86 39 chr10 48758706 48758825 -96830463 + L1ME3A LINE L1 2180 2293 -3922 2204 135 0 0 chr10 48758825 48759129 -96830159 + AluSx SINE Alu 1 304 -8 255 213 86 39 chr10 48759129 48759223 -96830065 + L1ME3A LINE L1 2293 2381 -3834 230 274 104 0 chr10 48759328 48759434 -96829854 + L1ME3A LINE L1 2543 2659 -3556 1673 165 17 14 chr10 48759645 48759942 -96829346 - AluJb SINE Alu -14 298 1 24 32 0 0 chr10 48759949 48759980 -96829308 + AT_rich Low_complexity Low_complexity 1 31 0 3356 181 51 13 chr10 48760004 48761303 -96827985 - L1MB5 LINE L1 -68 6106 4703 288 253 98 41 chr10 48761301 48761546 -96827742 - L1MB5 LINE L1 -2928 3218 2960 * 725 295 77 21 chr10 48761740 48762258 -96827030 + L1ME3A LINE L1 4778 5324 -891 1077 175 0 0 chr10 48762263 48762434 -96826854 + AluSg/x SINE Alu 131 301 -11 268 192 41 27 chr10 48762505 48762578 -96826710 + L1ME3A LINE L1 5451 5524 -711 904 262 39 73 chr10 48762597 48763006 -96826282 + L1ME3A LINE L1 5623 6017 -222 181 368 147 25 chr10 48764099 48764262 -96825026 + L2 LINE L2 2397 2579 -735 2385 87 7 0 chr10 48764986 48765285 -96824003 - AluSq SINE Alu -11 302 2 766 179 0 0 chr10 48765291 48765425 -96823863 - FAM SINE Alu -17 168 35 27 0 0 0 chr10 48766513 48766540 -96822748 + AT_rich Low_complexity Low_complexity 1 27 0 315 252 245 7 chr10 48766762 48766917 -96822371 - MIR SINE MIR -6 256 65 572 252 107 63 chr10 48768528 48768846 -96820442 - MER57A LTR ERV1 -25 378 47 420 271 99 7 chr10 48768862 48769013 -96820275 + MER112 DNA MER1_type 90 254 -6 1497 183 16 4 chr10 48769366 48769618 -96819670 + AluJo SINE Alu 32 286 -26 267 54 0 0 chr10 48769622 48769659 -96819629 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 180 250 275 0 chr10 48770404 48770484 -96818804 - L2 LINE L2 -4 3309 3208 1167 315 131 24 chr10 48771381 48772270 -96817018 - L2 LINE L2 -611 2703 1720 181 278 0 19 chr10 48772595 48772649 -96816639 - L2 LINE L2 -2085 1229 1177 317 312 82 75 chr10 48772921 48773213 -96816075 - L2 LINE L2 -868 2446 2153 27 62 0 0 chr10 48773430 48773478 -96815810 + AT_rich Low_complexity Low_complexity 1 48 0 3286 196 44 14 chr10 48773807 48774446 -96814842 - MER21B LTR ERV1 -31 832 175 29611 92 14 12 chr10 48774468 48779627 -96809661 + L1PA7 LINE L1 992 6154 0 444 292 86 51 chr10 48779644 48780037 -96809251 + MLT1J LTR MaLR 3 439 -72 838 227 77 20 chr10 48780043 48780342 -96808946 - LTR56 LTR ERV1 -121 324 9 1603 200 28 76 chr10 48780428 48780996 -96808292 - LTR56-int LTR ERV1 -85 5038 4456 819 181 34 0 chr10 48781030 48781179 -96808109 - FRAM SINE Alu -19 157 4 5371 180 59 60 chr10 48781180 48782228 -96807060 - LTR49-int LTR ERV1 -624 5559 4511 2264 89 0 0 chr10 48782228 48782508 -96806780 + AluSg SINE Alu 9 288 -22 5371 180 59 60 chr10 48782508 48782708 -96806580 - LTR49-int LTR ERV1 -1672 4511 4312 2033 119 3 10 chr10 48782708 48783011 -96806277 + AluSx SINE Alu 1 301 -11 5371 180 59 60 chr10 48783011 48784114 -96805174 - LTR49-int LTR ERV1 -1871 4312 1708 2845 164 94 43 chr10 48784238 48784910 -96804378 - LTR49-int LTR ERV1 -2885 3446 2741 26 0 0 0 chr10 48784999 48785025 -96804263 + AT_rich Low_complexity Low_complexity 1 26 0 366 175 18 42 chr10 48785025 48785191 -96804097 + (TA)n Simple_repeat Simple_repeat 1 162 0 1584 150 20 57 chr10 48785194 48785527 -96803761 - LTR49-int LTR ERV1 -4662 1669 1001 516 126 0 11 chr10 48785606 48785693 -96803595 - LTR49-int LTR ERV1 -4948 1383 1298 576 196 127 73 chr10 48786178 48786233 -96803055 - MER34C LTR ERV1 -203 382 331 1964 122 24 0 chr10 48786233 48786520 -96802768 + AluSx SINE Alu 1 294 -18 576 196 127 73 chr10 48786520 48786684 -96802604 - MER34C LTR ERV1 -254 331 151 985 231 87 34 chr10 48787122 48787534 -96801754 - LTR56 LTR ERV1 0 445 12 677 157 17 9 chr10 48788936 48789051 -96800237 + FLAM_C SINE Alu 1 116 -27 25 83 0 0 chr10 48789722 48789782 -96799506 + AT_rich Low_complexity Low_complexity 1 60 0 713 248 158 35 chr10 48791905 48792159 -96797129 - L2 LINE L2 0 3313 3029 1807 236 13 42 chr10 48792163 48792638 -96796650 - MLT2B1 LTR ERVL -59 461 1 4240 166 75 53 chr10 48793780 48794673 -96794615 - MER21A LTR ERV1 -6 925 13 580 298 163 72 chr10 48794826 48795581 -96793707 + L2 LINE L2 1550 2373 -941 273 234 135 36 chr10 48795638 48795749 -96793539 + MIR SINE MIR 50 171 -91 217 292 56 0 chr10 48795827 48795899 -96793389 + MIR SINE MIR 162 237 -25 4499 240 121 19 chr10 48795969 48797848 -96791440 + L1MC3 LINE L1 3013 5195 -951 2545 211 86 11 chr10 48797838 48799040 -96790248 + L1MD2 LINE L1 4583 5881 -478 * 575 195 92 12 chr10 48799034 48799198 -96790090 - L1M4 LINE L1 -795 5351 5175 * 718 186 93 0 chr10 48799193 48799365 -96789923 - L1MD3 LINE L1 -12 7983 7796 1675 166 10 28 chr10 48799409 48799698 -96789590 - AluJo SINE Alu -17 295 12 886 201 117 88 chr10 48799709 48799844 -96789444 + L1MD2 LINE L1 5924 6054 -305 2244 120 0 0 chr10 48799844 48800144 -96789144 - AluSx SINE Alu -12 300 1 886 201 117 88 chr10 48800144 48800417 -96788871 + L1MD2 LINE L1 6054 6344 -15 * 1479 245 150 12 chr10 48800412 48801231 -96788057 + L1MC3 LINE L1 5175 5403 -743 280 313 69 38 chr10 48801246 48801406 -96787882 + L2 LINE L2 2930 3094 -178 234 309 188 54 chr10 48802681 48802830 -96786458 + L2 LINE L2 2599 2767 -547 21 36 0 0 chr10 48804134 48804162 -96785126 + AT_rich Low_complexity Low_complexity 1 28 0 965 143 199 0 chr10 48804229 48804425 -96784863 - MER46A DNA MER2_type -1 235 1 571 306 77 7 chr10 48804970 48805280 -96784008 + L1ME3 LINE L1 5617 5948 -214 2302 95 0 0 chr10 48805431 48805726 -96783562 + AluSg SINE Alu 1 295 -15 2404 72 16 0 chr10 48805990 48806171 -96783117 - AluY SINE Alu 0 311 121 369 0 0 0 chr10 48806171 48806212 -96783076 + (TG)n Simple_repeat Simple_repeat 2 42 0 2404 72 16 0 chr10 48806212 48806336 -96782952 - AluY SINE Alu -190 121 1 1992 117 39 3 chr10 48806427 48806709 -96782579 - AluSc SINE Alu -17 292 1 198 0 0 0 chr10 48807360 48807382 -96781906 + (TA)n Simple_repeat Simple_repeat 2 23 0 196 320 107 0 chr10 48808338 48808460 -96780828 - L2 LINE L2 -222 3050 2916 236 259 49 12 chr10 48808769 48808850 -96780438 + L2 LINE L2 3230 3313 0 339 331 140 49 chr10 48809460 48809825 -96779463 - L3 LINE CR1 -1003 574 177 931 207 0 58 chr10 48809844 48810086 -96779202 - L1MB8 LINE L1 0 6178 5951 1490 219 0 72 chr10 48810969 48811344 -96777944 - MLT1A2 LTR MaLR -3 371 24 3747 195 78 8 chr10 48812461 48814018 -96775270 - L1MB5 LINE L1 -8 6664 4999 194 150 25 0 chr10 48814020 48814060 -96775228 + T-rich Low_complexity Low_complexity 4 44 0 * 379 151 47 0 chr10 48814052 48814138 -96775150 + C-rich Low_complexity Low_complexity 2 91 0 1760 106 0 4 chr10 48814163 48814399 -96774889 - AluSq SINE Alu -78 235 1 1184 206 17 124 chr10 48814399 48814811 -96774477 - L1MB5 LINE L1 -4788 1858 1491 3933 150 43 4 chr10 48815033 48815772 -96773516 - L1MB3 LINE L1 -3 6180 5413 414 126 69 23 chr10 48815785 48815872 -96773416 - L1MB5 LINE L1 -6403 139 49 405 0 0 0 chr10 48816069 48816114 -96773174 + (TA)n Simple_repeat Simple_repeat 2 46 0 1816 218 39 28 chr10 48816146 48816656 -96772632 - L1MB8 LINE L1 -1 6177 5662 607 179 0 9 chr10 48816702 48816808 -96772480 - FRAM SINE Alu -8 168 64 1807 173 3 19 chr10 48816822 48817135 -96772153 - AluJo SINE Alu -4 308 1 22 0 0 0 chr10 48817138 48817160 -96772128 + AT_rich Low_complexity Low_complexity 1 22 0 323 340 19 13 chr10 48818287 48818443 -96770845 - HERVL LTR ERVL -324 5330 5174 451 293 69 21 chr10 48818456 48818644 -96770644 - MLT1I LTR MaLR -142 267 71 930 200 121 0 chr10 48819233 48819423 -96769865 - MER20 DNA MER1_type -6 213 1 784 218 124 15 chr10 48820191 48820393 -96768895 - MER58A DNA MER1_type 0 224 1 402 293 65 48 chr10 48820578 48820807 -96768481 - MLT1I LTR MaLR -7 402 170 2064 145 3 0 chr10 48823776 48824080 -96765208 + AluSx SINE Alu 1 305 -7 2001 126 3 7 chr10 48824250 48824587 -96764701 - AluSx SINE Alu 0 336 1 26 0 0 0 chr10 48824951 48824977 -96764311 + AT_rich Low_complexity Low_complexity 1 26 0 21 0 0 0 chr10 48825968 48825989 -96763299 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr10 48827102 48827125 -96762163 + AT_rich Low_complexity Low_complexity 1 23 0 21 100 0 0 chr10 48828469 48828539 -96760749 + AT_rich Low_complexity Low_complexity 1 70 0 2348 51 0 4 chr10 48829756 48830030 -96759258 - AluY SINE Alu -23 288 16 707 298 118 10 chr10 48830030 48830419 -96758869 - L1MC4a LINE L1 -1923 5885 5455 1849 162 0 7 chr10 48831068 48831376 -96757912 - AluJo SINE Alu -6 306 1 243 114 0 0 chr10 48831393 48831428 -96757860 - Alu SINE Alu -179 123 89 451 242 108 6 chr10 48831428 48831585 -96757703 - MER104 DNA Tc2 -7 173 1 2210 122 0 0 chr10 48832335 48832647 -96756641 - AluSx SINE Alu 0 312 1 351 314 152 10 chr10 48834107 48834311 -96754977 - MIR SINE MIR -10 252 20 233 282 14 14 chr10 48834352 48834423 -96754865 - L2 LINE L2 -205 3067 2997 23 68 0 0 chr10 48837655 48837699 -96751589 + AT_rich Low_complexity Low_complexity 1 44 0 22 0 0 0 chr10 48841565 48841587 -96747701 + AT_rich Low_complexity Low_complexity 1 22 0 215 319 124 45 chr10 48842785 48843051 -96746237 - L2 LINE L2 -338 2976 2690 2544 57 0 3 chr10 48843705 48844005 -96745283 - AluY SINE Alu -12 299 1 269 325 104 0 chr10 48844377 48844540 -96744748 + MIR SINE MIR 6 185 -77 214 276 115 0 chr10 48845423 48845510 -96743778 + L2 LINE L2 1634 1730 -1584 303 313 61 25 chr10 48845514 48845677 -96743611 + L2 LINE L2 2700 2868 -446 209 276 46 46 chr10 48846997 48847084 -96742204 + MIR SINE MIR 102 188 -74 657 304 115 31 chr10 48849914 48850470 -96738818 + L2 LINE L2 2258 2860 -454 280 289 103 0 chr10 48851169 48851266 -96738022 - MIR SINE MIR -71 137 31 479 271 49 7 chr10 48854939 48855083 -96734205 + MIR SINE MIR 65 214 -48 195 354 15 0 chr10 48856120 48856185 -96733103 + L2 LINE L2 3124 3189 -83 231 36 0 0 chr10 48859063 48859091 -96730197 + (TCCC)n Simple_repeat Simple_repeat 1 28 0 182 269 19 0 chr10 48860764 48860816 -96728472 - L2 LINE L2 -559 2755 2703 209 219 0 0 chr10 48860863 48860904 -96728384 + MER5B DNA MER1_type 36 76 -102 187 311 44 0 chr10 48861038 48861128 -96728160 + L3 LINE CR1 1023 1116 -461 380 298 84 0 chr10 48862475 48862606 -96726682 + L1ME3A LINE L1 5713 5854 -316 3792 167 32 29 chr10 48862634 48863406 -96725882 + L1MB3 LINE L1 5394 6168 -15 990 230 75 0 chr10 48863447 48863712 -96725576 + L1ME3A LINE L1 5875 6159 -11 211 191 24 0 chr10 48864199 48864241 -96725047 + L2 LINE L2 3214 3256 -16 348 320 0 16 chr10 48864364 48864489 -96724799 + (TG)n Simple_repeat Simple_repeat 1 123 0 376 221 26 173 chr10 48864559 48864790 -96724498 - MIR SINE MIR -33 229 33 887 256 93 4 chr10 48865233 48865502 -96723786 + MER102b DNA MER1_type 24 316 -25 22 56 0 0 chr10 48868790 48868826 -96720462 + GC_rich Low_complexity Low_complexity 1 36 0 29 47 0 0 chr10 48868991 48869034 -96720254 + GC_rich Low_complexity Low_complexity 1 43 0 226 299 112 0 chr10 48869238 48869345 -96719943 - MIR SINE MIR -124 138 20 282 297 144 0 chr10 48869430 48869548 -96719740 - MIR SINE MIR -108 154 20 181 321 83 12 chr10 48869991 48870075 -96719213 + MIR SINE MIR 17 106 -156 701 210 22 22 chr10 48870185 48870366 -96718922 + MER96B DNA MER1_type? 1 181 -236 779 255 58 20 chr10 48870460 48870919 -96718369 + MLT1D LTR MaLR 1 505 0 517 152 128 8 chr10 48870920 48871045 -96718243 + MER96B DNA MER1_type? 278 417 0 338 312 78 13 chr10 48872142 48872296 -96716992 + MIR SINE MIR 23 186 -76 1139 276 121 22 chr10 48873713 48874180 -96715108 + L2 LINE L2 2271 2690 -623 2160 108 0 3 chr10 48874180 48874487 -96714801 + AluSg SINE Alu 1 306 -4 2136 106 0 0 chr10 48874495 48874820 -96714468 + AluSx SINE Alu 1 325 0 1139 276 121 22 chr10 48874820 48875020 -96714268 + L2 LINE L2 2696 3011 -302 3829 142 48 11 chr10 48875031 48875698 -96713590 + L1MB3 LINE L1 5434 6125 -58 225 280 53 0 chr10 48875698 48875773 -96713515 + L2 LINE L2 3233 3311 -2 565 307 42 16 chr10 48875825 48876014 -96713274 - MIR SINE MIR -48 214 21 3144 217 40 36 chr10 48876280 48877151 -96712137 - L1M4 LINE L1 -1570 4576 3702 2098 246 271 17 chr10 48877151 48878458 -96710830 + L2 LINE L2 1596 3241 -31 325 333 9 9 chr10 48879120 48879234 -96710054 + MIR SINE MIR 23 136 -126 390 311 156 0 chr10 48879238 48879450 -96709838 - L1ME3A LINE L1 -3 6167 5923 1503 295 81 15 chr10 48879471 48880318 -96708970 - L1ME3A LINE L1 -208 5962 5056 703 315 124 4 chr10 48880977 48881463 -96707825 + L2 LINE L2 2451 3012 -301 717 241 16 63 chr10 48882882 48883154 -96706134 - MIR SINE MIR -7 255 2 630 184 52 7 chr10 48883698 48883834 -96705454 + MER69 DNA AcHobo 2382 2523 -3 1964 211 49 10 chr10 48883919 48884612 -96704676 - L1ME LINE L1 -560 5842 5121 1148 208 25 7 chr10 48884637 48884911 -96704377 - L1ME LINE L1 -1922 4460 4182 * 5784 124 51 14 chr10 48884901 48885506 -96703782 - L1MA4A LINE L1 -3 6300 5719 878 88 96 0 chr10 48885506 48885631 -96703657 - MER85 DNA T2_type -2 137 1 5784 124 51 14 chr10 48885631 48886443 -96702845 - L1MA4A LINE L1 -584 5719 4845 3422 225 122 86 chr10 48886452 48887194 -96702094 - L1M4c LINE L1 -2190 4192 3478 915 233 64 0 chr10 48887194 48887396 -96701892 - MER58A DNA MER1_type -4 220 6 3422 225 122 86 chr10 48887396 48888579 -96700709 - L1M4c LINE L1 -2904 3478 2340 1791 124 4 11 chr10 48888579 48888854 -96700434 - AluSx SINE Alu 0 312 40 3422 225 122 86 chr10 48888854 48889503 -96699785 - L1M4c LINE L1 -4042 2340 1180 1793 211 19 74 chr10 48889520 48890032 -96699256 + MLT1D LTR MaLR 1 484 -21 1389 154 79 25 chr10 48890040 48890319 -96698969 + AluJo SINE Alu 3 296 -16 3375 247 70 30 chr10 48890362 48891438 -96697850 - L1MEc LINE L1 -5250 1146 28 434 355 59 0 chr10 48891445 48891631 -96697657 - MIR SINE MIR -19 243 47 2452 69 0 0 chr10 48891982 48892286 -96697002 - AluY SINE Alu -7 304 1 226 305 136 32 chr10 48892353 48892507 -96696781 + MIR SINE MIR 93 262 0 951 191 88 25 chr10 48892533 48892737 -96696551 - MER20 DNA MER1_type -2 217 1 246 265 129 61 chr10 48892924 48893056 -96696232 + L2 LINE L2 2141 2281 -1033 921 296 148 17 chr10 48893074 48893887 -96695401 + L2 LINE L2 2384 3305 -8 321 232 47 69 chr10 48894010 48894178 -96695110 - MIR SINE MIR -63 145 3 38 22 0 0 chr10 48894504 48894549 -96694739 + AT_rich Low_complexity Low_complexity 1 45 0 433 227 18 0 chr10 48894686 48894796 -96694492 - MER33 DNA MER1_type 0 363 252 2056 138 24 0 chr10 48894810 48895100 -96694188 - AluSq SINE Alu -16 297 1 347 22 0 0 chr10 48895108 48895154 -96694134 + MADE1 DNA Mariner 35 80 0 * 845 185 58 19 chr10 48895154 48895358 -96693930 - MER33 DNA MER1_type -109 215 4 402 310 35 0 chr10 48896224 48896340 -96692948 + MIR SINE MIR 73 192 -70 305 302 78 0 chr10 48896399 48896515 -96692773 - MIR SINE MIR -90 172 48 486 242 0 0 chr10 48896791 48896915 -96692373 + (TCCA)n Simple_repeat Simple_repeat 1 124 0 393 313 123 41 chr10 48897041 48897457 -96691831 + L2 LINE L2 2845 3294 -19 652 240 33 11 chr10 48897521 48897704 -96691584 - MIR SINE MIR -3 259 73 196 122 0 82 chr10 48897794 48897843 -96691445 - MIR SINE MIR -196 66 22 1603 276 44 30 chr10 48897857 48898425 -96690863 + MLT1E LTR MaLR 3 578 -15 597 259 27 36 chr10 48898607 48898827 -96690461 - MIR SINE MIR -24 238 21 306 345 72 50 chr10 48901653 48902070 -96687218 + L1ME LINE L1 3913 4338 -1808 1474 214 22 26 chr10 48902309 48902622 -96686666 + AluJo SINE Alu 1 312 0 321 284 87 52 chr10 48902670 48902859 -96686429 + L1ME LINE L1 4822 5003 -1143 2334 96 0 10 chr10 48902859 48903161 -96686127 + AluSx SINE Alu 1 299 -13 321 284 87 52 chr10 48903161 48903352 -96685936 + L1ME LINE L1 5003 5221 -925 243 301 114 40 chr10 48903748 48903924 -96685364 + L1ME LINE L1 5497 5685 -436 218 266 145 39 chr10 48904762 48904969 -96684319 + L2 LINE L2 2826 3054 -218 487 204 53 59 chr10 48905005 48905157 -96684131 - L2 LINE L2 0 3313 3163 249 254 0 0 chr10 48906220 48906275 -96683013 - LTR16A1 LTR ERVL 0 457 403 227 374 20 10 chr10 48906942 48907145 -96682143 - L2 LINE L2 -644 2670 2466 1798 135 4 4 chr10 48907302 48907561 -96681727 - AluSx SINE Alu -7 305 47 24 0 0 0 chr10 48907580 48907604 -96681684 + AT_rich Low_complexity Low_complexity 1 24 0 1606 206 52 0 chr10 48908439 48908769 -96680519 - MER7A DNA MER2_type -1 345 1 266 0 29 0 chr10 48910153 48910187 -96679101 + (TGGGGG)n Simple_repeat Simple_repeat 2 36 0 299 315 20 55 chr10 48912226 48912372 -96676916 + MIR SINE MIR 15 155 -53 437 305 11 37 chr10 48912985 48913172 -96676116 + MIR3 SINE MIR 3 184 -24 516 274 161 5 chr10 48914540 48914726 -96674562 + MIR SINE MIR 20 234 -28 268 293 151 71 chr10 48914810 48915022 -96674266 - MIR SINE MIR 0 262 34 4754 232 61 25 chr10 48915334 48918077 -96671211 + L1M4 LINE L1 382 3382 -3262 966 157 0 0 chr10 48918143 48918296 -96670992 + FRAM SINE Alu 23 175 -1 992 187 232 53 chr10 48918298 48918496 -96670792 + L1M4 LINE L1 3664 3825 -2819 1734 160 21 31 chr10 48918496 48918810 -96670478 + AluJo SINE Alu 1 311 0 992 187 232 53 chr10 48918810 48919118 -96670170 + L1M4 LINE L1 3825 4262 -2382 1372 201 82 56 chr10 48919119 48919532 -96669756 + L1MB7 LINE L1 5751 6174 -10 214 239 45 57 chr10 48920050 48920138 -96669150 - MIR3 SINE MIR -3 205 119 200 263 185 58 chr10 48920565 48920770 -96668518 - L2 LINE L2 -70 3243 3013 203 289 8 99 chr10 48921126 48921247 -96668041 - L2 LINE L2 -914 2400 2291 185 256 61 12 chr10 48922173 48922255 -96667033 - L2 LINE L2 -626 2688 2603 382 308 35 14 chr10 48925420 48925589 -96663699 - MER5A DNA MER1_type -6 183 1 28 114 0 0 chr10 48926362 48926502 -96662786 + GC_rich Low_complexity Low_complexity 1 140 0 24 0 0 0 chr10 48926614 48926638 -96662650 + GC_rich Low_complexity Low_complexity 1 24 0 382 236 94 0 chr10 48926977 48927083 -96662205 + MIR SINE MIR 39 154 -108 547 273 30 30 chr10 48927118 48927283 -96662005 + MIR SINE MIR 97 261 -1 461 335 55 30 chr10 48927287 48927544 -96661744 + L1ME LINE L1 5488 5774 -402 2064 160 0 0 chr10 48927544 48927850 -96661438 + AluSx SINE Alu 1 306 -6 461 335 55 30 chr10 48927850 48927898 -96661390 + L1ME LINE L1 5774 5819 -357 186 237 34 34 chr10 48927963 48928022 -96661266 - L2 LINE L2 -8 3305 3247 503 269 86 16 chr10 48929238 48929424 -96659864 - MIR SINE MIR -6 256 58 765 220 2 2 chr10 48929424 48929878 -96659410 + (TGGA)n Simple_repeat Simple_repeat 1 454 0 2266 160 19 32 chr10 48930856 48931288 -96658000 + MSTB LTR MaLR 1 426 0 192 318 85 24 chr10 48931317 48931528 -96657760 - L2 LINE L2 -527 2787 2564 533 262 37 85 chr10 48931550 48931893 -96657395 + MLT1F LTR MaLR 16 343 -199 416 219 31 0 chr10 48931890 48931986 -96657302 + MLT1F LTR MaLR 449 547 -48 * 6323 123 2 6 chr10 48931986 48932208 -96657080 + L1PB1 LINE L1 4770 4991 -1160 2347 114 0 0 chr10 48932208 48932515 -96656773 + AluSx SINE Alu 1 307 -5 6323 123 2 6 chr10 48932515 48933676 -96655612 + L1PB1 LINE L1 4991 6145 -6 324 232 0 0 chr10 48933693 48933762 -96655526 + MLT1H1 LTR MaLR 487 555 0 625 248 28 106 chr10 48933801 48934055 -96655233 - MIR SINE MIR -22 240 7 416 329 18 24 chr10 48934331 48934498 -96654790 - MIR SINE MIR -57 205 40 2953 40 0 3 chr10 48934740 48935113 -96654175 - L1PA5 LINE L1 0 6154 5783 189 147 0 0 chr10 48935122 48935156 -96654132 - L2 LINE L2 -19 3294 3261 1191 193 14 5 chr10 48935835 48936048 -96653240 - MER58A DNA MER1_type 0 224 10 757 257 92 5 chr10 48936856 48937070 -96652218 - MIR SINE MIR -23 239 14 235 234 131 37 chr10 48937371 48937478 -96651810 - MIR SINE MIR -31 231 115 600 272 116 74 chr10 48937478 48937882 -96651406 - MLT1J2 LTR MaLR -3 447 27 421 330 116 5 chr10 48938869 48939093 -96650195 - MER112 DNA MER1_type -11 249 1 227 143 0 0 chr10 48939789 48939824 -96649464 - L2 LINE L2 -17 3296 3262 1190 198 75 39 chr10 48940263 48940622 -96648666 - MLT1C LTR MaLR -1 466 95 2845 7 0 0 chr10 48941545 48941844 -96647444 - AluYa5 SINE Alu -12 299 1 29 70 0 0 chr10 48942100 48942157 -96647131 + AT_rich Low_complexity Low_complexity 1 57 0 348 338 32 7 chr10 48942200 48942354 -96646934 - MIR SINE MIR -90 172 15 2097 90 22 0 chr10 48942516 48942784 -96646504 - AluSp SINE Alu -39 274 1 280 323 0 0 chr10 48942872 48942937 -96646351 - Charlie8 DNA MER1_type -2339 78 14 440 196 10 0 chr10 48943281 48943378 -96645910 - MER5A DNA MER1_type -77 112 15 181 241 74 19 chr10 48944318 48944372 -96644916 + MIR SINE MIR 90 146 -62 1804 229 64 131 chr10 48944539 48945403 -96643885 + MER45C DNA AcHobo 1 806 -147 474 212 73 22 chr10 48945688 48945825 -96643463 - MER45 DNA AcHobo 0 1581 1438 413 273 230 0 chr10 48945829 48945968 -96643320 + MER5A DNA MER1_type 17 187 -2 2314 94 10 7 chr10 48946093 48946392 -96642896 + AluSx SINE Alu 1 300 -12 341 353 53 29 chr10 48946412 48946619 -96642669 - MIR SINE MIR -38 224 13 220 175 35 35 chr10 48946633 48946690 -96642598 + CT-rich Low_complexity Low_complexity 3 59 0 470 212 34 0 chr10 48946725 48946843 -96642445 + MER3 DNA MER1_type 41 162 -47 1065 161 69 97 chr10 48946846 48946952 -96642336 + MER3 DNA MER1_type 2234 2341 -283 1264 102 46 0 chr10 48946952 48947149 -96642139 + L1MA5A LINE L1 6089 6294 -3 1065 161 69 97 chr10 48947149 48947403 -96641885 + MER3 DNA MER1_type 2341 2584 -40 296 187 0 40 chr10 48947449 48947524 -96641764 + MER3 DNA MER1_type 2514 2585 0 322 333 16 8 chr10 48948156 48948282 -96641006 - MIR3 SINE MIR -32 176 50 334 297 72 7 chr10 48949147 48949298 -96639990 - MIR SINE MIR -51 157 37 299 350 70 0 chr10 48951155 48951312 -96637976 + MIR SINE MIR 20 187 -75 302 236 0 14 chr10 48952111 48952183 -96637105 + MER5A DNA MER1_type 119 189 0 357 302 61 68 chr10 48952314 48952609 -96636679 + L2 LINE L2 2903 3195 -77 585 229 46 0 chr10 48952634 48952809 -96636479 + MLT1J1 LTR MaLR 3 185 -261 254 192 154 0 chr10 48952940 48953018 -96636270 + MLT1J2 LTR MaLR 361 450 0 270 256 34 51 chr10 48955146 48955263 -96634025 + MIR SINE MIR 32 146 -116 294 294 80 31 chr10 48955715 48955878 -96633410 + MIR SINE MIR 14 184 -78 496 151 12 12 chr10 48955878 48955964 -96633324 + MLT1D LTR MaLR 1 86 -419 650 286 74 14 chr10 48956731 48957142 -96632146 + LTR16C LTR ERVL 4 487 -4 453 257 20 66 chr10 48958387 48958539 -96630749 + MIR SINE MIR 1 145 -63 687 253 134 10 chr10 48958802 48959004 -96630284 + MIR SINE MIR 31 257 -5 202 350 67 17 chr10 48959684 48959804 -96629484 - MIR SINE MIR -44 218 93 302 211 18 0 chr10 48960215 48960272 -96629016 - MER5A DNA MER1_type -2 187 130 895 218 95 41 chr10 48960277 48960593 -96628695 + MER63B DNA MER1_type 4 336 -100 269 48 48 0 chr10 48960595 48960637 -96628651 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 1514 171 18 32 chr10 48960640 48960920 -96628368 - AluJb SINE Alu -36 276 1 502 203 105 38 chr10 48960944 48961077 -96628211 - MER5A DNA MER1_type -46 143 2 498 238 0 19 chr10 48961120 48961225 -96628063 + MIR SINE MIR 100 202 -60 294 244 29 0 chr10 48961749 48961840 -96627448 - L1MC/D LINE L1 -532 5589 5511 371 293 30 0 chr10 48961891 48961990 -96627298 - L1MC/D LINE L1 -750 5396 5295 628 175 141 30 chr10 48962003 48962236 -96627052 - Charlie5 DNA MER1_type -87 2525 2267 498 155 26 86 chr10 48962236 48962352 -96626936 + MLT1D LTR MaLR 1 109 -396 1021 188 42 25 chr10 48962370 48962610 -96626678 - L1MC/D LINE L1 -1413 4733 4490 2268 254 23 6 chr10 48962630 48963284 -96626004 - L1MC/D LINE L1 -1863 4283 3619 3212 223 36 34 chr10 48963288 48964199 -96625089 + L1ME1 LINE L1 4687 5601 -565 2300 100 0 3 chr10 48964199 48964498 -96624790 + AluSg SINE Alu 2 299 -11 3212 223 36 34 chr10 48964498 48965061 -96624227 + L1ME1 LINE L1 5601 6161 -5 804 148 91 104 chr10 48965079 48965113 -96624175 + Charlie5 DNA MER1_type 2238 2271 -353 1585 156 123 84 chr10 48965113 48965441 -96623847 - MLT1D LTR MaLR 0 505 150 2495 63 10 0 chr10 48965441 48965743 -96623545 - AluY SINE Alu -6 305 1 1585 156 123 84 chr10 48965743 48965900 -96623388 - MLT1D LTR MaLR -355 150 1 804 148 91 104 chr10 48965900 48966162 -96623126 + Charlie5 DNA MER1_type 2271 2530 -94 249 261 33 0 chr10 48966162 48966254 -96623034 + L1ME LINE L1 5304 5398 -899 464 293 91 19 chr10 48966303 48966566 -96622722 + L1ME LINE L1 5511 5792 -329 346 362 122 5 chr10 48967382 48967578 -96621710 + MIR SINE MIR 25 243 -19 429 183 29 43 chr10 48969856 48970008 -96619280 + MLT1J2 LTR MaLR 62 213 -235 194 260 27 55 chr10 48972156 48972229 -96617059 - MER5A DNA MER1_type -114 75 5 366 312 45 25 chr10 48973337 48973494 -96615794 - L3 LINE CR1 -12 1565 1406 281 251 251 58 chr10 48973579 48973802 -96615486 - L3 LINE CR1 -330 1247 982 * 330 275 12 0 chr10 48973787 48973867 -96615421 + MIR SINE MIR 81 161 -101 480 255 120 43 chr10 48973870 48974078 -96615210 - MLT1H1 LTR MaLR 0 555 332 3978 194 59 19 chr10 48974202 48975084 -96614204 + MER49 LTR ERV1 7 923 0 540 226 39 45 chr10 48975086 48975241 -96614047 - MLT1H1 LTR MaLR -399 156 3 379 263 50 10 chr10 48975243 48975342 -96613946 + MIR SINE MIR 160 262 0 401 236 65 24 chr10 48975504 48975627 -96613661 - MIR SINE MIR -58 204 77 334 328 17 9 chr10 48976033 48976149 -96613139 - MIR SINE MIR -142 120 4 211 326 87 41 chr10 48976149 48976239 -96613049 + MIR SINE MIR 87 184 -78 572 299 15 0 chr10 48976240 48976377 -96612911 - L2 LINE L2 -5 3308 3170 218 130 0 43 chr10 48976457 48976503 -96612785 + (TTCA)n Simple_repeat Simple_repeat 2 45 0 238 293 27 82 chr10 48976503 48976650 -96612638 - L2 LINE L2 0 3313 3175 209 309 0 0 chr10 48977072 48977127 -96612161 + MIR SINE MIR 112 166 -96 2844 114 17 5 chr10 48977151 48977572 -96611716 + MSTA LTR MaLR 1 426 -2 21 36 0 0 chr10 48978668 48978696 -96610592 + AT_rich Low_complexity Low_complexity 1 28 0 516 256 39 91 chr10 48978867 48979253 -96610035 - HAL1 LINE L1 -1 2506 2141 1109 300 131 40 chr10 48979359 48980055 -96609233 - HAL1 LINE L1 -1349 1158 332 2335 101 16 3 chr10 48980055 48980362 -96608926 - AluSx SINE Alu -1 311 1 1109 300 131 40 chr10 48980362 48980726 -96608562 - HAL1 LINE L1 -2175 332 2 378 42 0 0 chr10 48980773 48980821 -96608467 + (TG)n Simple_repeat Simple_repeat 2 49 0 374 348 77 50 chr10 48980864 48981203 -96608085 - L1MCa LINE L1 -3544 2882 2535 351 314 49 53 chr10 48981221 48981466 -96607822 - L1MCa LINE L1 -3947 2479 2236 300 291 84 61 chr10 48983077 48983215 -96606073 - MIR SINE MIR -32 230 84 2713 142 42 7 chr10 48983215 48983673 -96605615 + MER101 LTR ERV1 1 474 0 300 291 84 61 chr10 48983673 48983747 -96605541 - MIR SINE MIR -178 84 13 678 237 76 119 chr10 48983805 48983897 -96605391 + MER113 DNA MER1_type? 32 126 -395 470 228 0 0 chr10 48983897 48983998 -96605290 - L1MB4 LINE L1 -1 6179 6079 678 237 76 119 chr10 48983998 48984315 -96604973 + MER113 DNA MER1_type? 126 423 -98 288 189 0 0 chr10 48985689 48985763 -96603525 + (TCCA)n Simple_repeat Simple_repeat 1 74 0 429 276 0 45 chr10 48985786 48985920 -96603368 - L2 LINE L2 0 3313 3186 284 283 88 96 chr10 48986551 48986802 -96602486 + L2 LINE L2 2933 3181 -91 2533 64 0 0 chr10 48986966 48987263 -96602025 + AluY SINE Alu 1 297 -14 1823 87 97 109 chr10 48987312 48987730 -96601558 + LTR14B LTR ERVK 1 608 0 196 254 31 108 chr10 48988541 48988671 -96600617 + MIR SINE MIR 109 228 -34 307 292 121 64 chr10 48988809 48989073 -96600215 - L1ME LINE L1 -566 5598 5320 249 337 161 16 chr10 48991657 48992037 -96597251 + L2 LINE L2 2216 2650 -664 325 151 0 0 chr10 48992227 48992280 -96597008 + L1MA6 LINE L1 6248 6300 0 414 222 8 51 chr10 48993211 48993328 -96595960 - MIR SINE MIR -115 147 36 228 306 28 28 chr10 48993747 48993891 -96595397 + L1ME3 LINE L1 5388 5531 -635 1382 162 0 0 chr10 48993930 48994134 -96595154 + AluJb SINE Alu 86 289 -23 180 0 0 0 chr10 48994140 48994160 -96595128 + (CAA)n Simple_repeat Simple_repeat 2 21 0 225 232 87 0 chr10 48994256 48994325 -96594963 + L1ME3 LINE L1 5717 5791 -373 647 255 253 48 chr10 48994380 48994446 -96594842 + L2 LINE L2 1759 1810 -1504 536 210 84 25 chr10 48994446 48994565 -96594723 - FLAM_A SINE Alu -7 126 1 647 255 253 48 chr10 48994565 48995063 -96594225 + L2 LINE L2 1810 2439 -875 348 280 161 40 chr10 48995067 48995535 -96593753 + L2 LINE L2 2625 3155 -158 708 118 37 137 chr10 48995583 48995744 -96593544 - Tigger7 DNA MER2_type 0 2587 2443 * 1560 191 137 0 chr10 48995732 48996047 -96593241 - Tigger7 DNA MER2_type -2128 359 2 26 50 0 0 chr10 48996226 48996266 -96593022 + AT_rich Low_complexity Low_complexity 1 40 0 359 323 57 0 chr10 48996330 48996454 -96592834 - L2 LINE L2 -2 3311 3181 266 255 43 11 chr10 48997123 48997217 -96592071 + LTR16C LTR ERVL 372 468 -23 1628 182 45 0 chr10 48997773 48998064 -96591224 - AluJo SINE Alu -8 304 1 225 286 22 33 chr10 48999735 48999826 -96589462 + MIR SINE MIR 104 193 -69 527 255 15 51 chr10 49001147 49001343 -96587945 + MIR SINE MIR 17 205 -57 269 238 220 77 chr10 49002278 49002446 -96586842 + MIR SINE MIR 61 252 -10 683 185 159 53 chr10 49002531 49002758 -96586530 + L1ME3 LINE L1 5912 6162 0 1541 242 46 23 chr10 49003605 49004122 -96585166 - HAL1 LINE L1 -42 2465 1937 364 189 198 9 chr10 49004295 49004406 -96584882 + MIR SINE MIR 125 256 -6 398 335 48 89 chr10 49004883 49005176 -96584112 - L2 LINE L2 0 3272 2992 232 343 0 0 chr10 49005182 49005252 -96584036 + (CATG)n Simple_repeat Simple_repeat 1 70 0 670 139 70 9 chr10 49005341 49005456 -96583832 - MER20 DNA MER1_type -97 122 1 1453 128 104 34 chr10 49005541 49005838 -96583450 - MER33 DNA MER1_type -1 323 6 183 100 0 0 chr10 49007392 49007422 -96581866 + (CGGGG)n Simple_repeat Simple_repeat 5 34 0 760 257 61 14 chr10 49007953 49008206 -96581082 - MIR SINE MIR 0 262 3 232 211 0 79 chr10 49008948 49009024 -96580264 + L2 LINE L2 2928 2997 -275 586 201 149 7 chr10 49010226 49010380 -96578908 - MER5B DNA MER1_type 0 178 3 362 292 68 47 chr10 49010529 49010721 -96578567 + MER91A DNA MER1_type 1 196 0 1755 194 32 45 chr10 49011010 49011413 -96577875 - MER63B DNA MER1_type -38 398 1 967 219 116 36 chr10 49011470 49011831 -96577457 + MLT1J1 LTR MaLR 4 393 -53 815 89 0 8 chr10 49014038 49014161 -96575127 + (TTCCC)n Simple_repeat Simple_repeat 3 124 0 1590 99 0 0 chr10 49014162 49014374 -96574914 - AluSg SINE Alu -98 212 1 296 263 0 12 chr10 49014927 49015007 -96574281 + MLT1K LTR MaLR 509 587 -1 187 242 167 15 chr10 49015520 49015586 -96573702 + L2 LINE L2 1872 1947 -1367 656 309 112 42 chr10 49015821 49016029 -96573259 - L2 LINE L2 -995 2319 2127 1697 220 70 5 chr10 49016029 49016401 -96572887 + MSTD LTR MaLR 1 396 0 656 309 112 42 chr10 49016401 49016649 -96572639 - L2 LINE L2 -1187 2127 1831 5213 223 51 39 chr10 49016785 49018271 -96571017 + L1M4 LINE L1 6 1509 -5033 717 227 0 19 chr10 49018300 49018454 -96570834 + Tigger1 DNA MER2_type 13 163 -2255 * 878 188 125 0 chr10 49018435 49018627 -96570661 + Tigger1 DNA MER2_type 2202 2417 -1 14032 192 29 15 chr10 49018627 49022279 -96567009 + L1M4 LINE L1 1513 5814 -830 354 289 31 23 chr10 49022585 49022713 -96566575 - MIR SINE MIR -98 164 36 1443 224 50 19 chr10 49023916 49024595 -96564693 - L1M4 LINE L1 -3507 2875 2171 234 150 0 0 chr10 49024620 49024660 -96564628 - L1M LINE L1 -693 5428 5389 923 65 0 136 chr10 49024680 49024849 -96564439 - L1MA5 LINE L1 -2 6298 6153 597 305 36 18 chr10 49024851 49025074 -96564214 + MIR SINE MIR 28 254 -8 401 301 37 18 chr10 49026239 49026402 -96562886 + MIR SINE MIR 27 192 -70 1895 146 7 10 chr10 49026410 49026719 -96562569 + AluSx SINE Alu 1 308 -4 192 343 29 0 chr10 49026839 49026909 -96562379 + MIR3 SINE MIR 97 168 -40 531 240 32 26 chr10 49027296 49027450 -96561838 + MIR SINE MIR 29 183 -79 228 276 181 31 chr10 49027527 49027654 -96561634 - MIR SINE MIR -11 251 106 414 0 0 0 chr10 49027947 49027993 -96561295 + (CA)n Simple_repeat Simple_repeat 2 47 0 2038 247 73 56 chr10 49028952 49029661 -96559627 + MER21B LTR ERV1 1 725 -138 225 65 0 0 chr10 49029661 49029692 -96559596 + (AATTG)n Simple_repeat Simple_repeat 1 31 0 2038 247 73 56 chr10 49029692 49029719 -96559569 + MER21B LTR ERV1 725 750 -113 321 298 46 38 chr10 49030057 49030188 -96559100 + MER91A DNA MER1_type 45 176 -20 203 202 115 77 chr10 49030624 49030728 -96558560 - MIR SINE MIR -63 145 38 940 276 46 28 chr10 49031338 49031621 -96557667 + LTR16A LTR ERVL 89 376 -74 1931 224 147 18 chr10 49031627 49032282 -96557006 - L1M4 LINE L1 -1083 5063 4325 * 4191 224 30 39 chr10 49032279 49032349 -96556939 - L1M4 LINE L1 -1525 4621 4552 2132 99 0 0 chr10 49032349 49032643 -96556645 - AluSc SINE Alu -15 294 1 4191 224 30 39 chr10 49032643 49033771 -96555517 - L1M4 LINE L1 -1594 4552 3434 1584 197 133 94 chr10 49033761 49034229 -96555059 - L1MCa LINE L1 -4278 2329 1881 * 2497 83 9 0 chr10 49034229 49034566 -96554722 - L1PB2 LINE L1 0 6151 5812 1584 197 133 94 chr10 49034566 49034914 -96554374 - L1MCa LINE L1 -4726 1881 1358 330 268 10 10 chr10 49035063 49035160 -96554128 - L1MCa LINE L1 -6310 116 20 384 252 131 0 chr10 49035318 49035425 -96553863 + L2 LINE L2 3193 3313 0 607 280 74 14 chr10 49035717 49035938 -96553350 - MIR SINE MIR -12 250 17 349 248 57 5 chr10 49036450 49036593 -96552695 + MIR3 SINE MIR 4 149 -73 1717 148 63 56 chr10 49036957 49037335 -96551953 + MLT1B LTR MaLR 7 387 -3 618 284 123 26 chr10 49037698 49038089 -96551199 + LTR16C LTR ERVL 62 490 -1 276 254 79 0 chr10 49038120 49038201 -96551087 + MIR SINE MIR 103 191 -71 487 200 25 19 chr10 49039595 49039755 -96549533 + (TGGA)n Simple_repeat Simple_repeat 3 163 0 899 128 17 17 chr10 49039794 49039973 -96549315 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 612 267 44 3 chr10 49040412 49040643 -96548645 + MLT2F LTR ERVL 2 325 -338 200 35 35 0 chr10 49040643 49040672 -96548616 + (TG)n Simple_repeat Simple_repeat 2 31 0 612 267 44 3 chr10 49040672 49040708 -96548580 + MLT2F LTR ERVL 325 358 -305 185 239 75 45 chr10 49040763 49040830 -96548458 + L2 LINE L2 372 440 -2874 333 234 0 0 chr10 49040911 49040975 -96548313 - L2 LINE L2 0 3313 3250 449 266 13 60 chr10 49041141 49041374 -96547914 + L1M4 LINE L1 17 238 -6304 2087 264 37 66 chr10 49041669 49042941 -96546347 + L1M4 LINE L1 716 1957 -4689 480 271 49 7 chr10 49044046 49044190 -96545098 - MIR SINE MIR -48 214 65 182 327 0 0 chr10 49045895 49045950 -96543338 + MIR SINE MIR 112 166 -96 1088 106 25 0 chr10 49045975 49046136 -96543152 + MSTA LTR MaLR 1 165 -263 261 319 101 14 chr10 49047682 49047820 -96541468 - MIR SINE MIR -76 186 37 519 152 128 8 chr10 49048966 49049091 -96540197 - MER96B DNA MER1_type? 0 417 278 754 255 58 27 chr10 49049092 49049553 -96539735 - MLT1D LTR MaLR 0 505 2 346 296 83 8 chr10 49052144 49052276 -96537012 + L1ME3A LINE L1 5713 5854 -316 3730 171 31 29 chr10 49052304 49053077 -96536211 + L1MB3 LINE L1 5394 6168 -15 311 220 24 95 chr10 49053251 49053419 -96535869 - MER96B DNA MER1_type? -249 168 13 281 297 144 0 chr10 49054087 49054205 -96535083 + MIR SINE MIR 20 154 -108 216 290 0 0 chr10 49054331 49054400 -96534888 + MIR SINE MIR 70 139 -69 29 47 0 0 chr10 49054610 49054653 -96534635 + GC_rich Low_complexity Low_complexity 1 43 0 22 56 0 0 chr10 49054818 49054854 -96534434 + GC_rich Low_complexity Low_complexity 1 36 0 986 239 14 5 chr10 49057534 49057747 -96531541 - MER58A DNA MER1_type 0 224 10 268 188 241 0 chr10 49058574 49058686 -96530602 - MIR SINE MIR -26 236 98 587 286 111 74 chr10 49059164 49059570 -96529718 - MLT1J2 LTR MaLR -3 447 27 385 352 25 6 chr10 49060561 49060723 -96528565 - MER112 DNA MER1_type -11 249 85 201 125 0 0 chr10 49061491 49061523 -96527765 - L2 LINE L2 -20 3252 3221 1190 198 75 39 chr10 49061965 49062324 -96526964 - MLT1C LTR MaLR -1 466 95 2516 23 0 23 chr10 49063278 49063584 -96525704 - AluYa5 SINE Alu -12 299 1 29 70 0 0 chr10 49063842 49063899 -96525389 + AT_rich Low_complexity Low_complexity 1 57 0 348 303 28 28 chr10 49063951 49064096 -96525192 - MIR SINE MIR -103 159 15 2003 93 26 4 chr10 49064260 49064528 -96524760 - AluSp SINE Alu -39 274 1 803 283 114 42 chr10 49064791 49065260 -96524028 + L2 LINE L2 2285 2719 -594 2123 103 0 19 chr10 49065260 49065570 -96523718 + AluSg SINE Alu 1 304 -6 2153 108 0 11 chr10 49065580 49065908 -96523380 + AluSx SINE Alu 1 325 0 803 283 114 42 chr10 49065908 49066111 -96523177 + L2 LINE L2 2727 3011 -302 3828 142 48 12 chr10 49066122 49066790 -96522498 + L1MB3 LINE L1 5434 6125 -58 221 280 53 0 chr10 49066790 49066865 -96522423 + L2 LINE L2 3233 3311 -2 557 308 43 18 chr10 49066917 49067121 -96522167 - MIR SINE MIR -48 214 8 2570 227 46 47 chr10 49067375 49068251 -96521037 - L1M4 LINE L1 -1570 4576 3702 1920 229 273 24 chr10 49068251 49069298 -96519990 + L2 LINE L2 1596 2903 -411 262 327 46 26 chr10 49069427 49069580 -96519708 + L2 LINE L2 3137 3292 -21 316 333 9 9 chr10 49070236 49070350 -96518938 + MIR SINE MIR 23 136 -126 352 315 148 14 chr10 49070354 49070570 -96518718 - L1ME3A LINE L1 -3 6167 5923 624 312 66 59 chr10 49070591 49071273 -96518015 - L1ME3A LINE L1 -208 5962 5276 23 0 0 0 chr10 49071508 49071531 -96517757 + GC_rich Low_complexity Low_complexity 1 23 0 382 236 94 0 chr10 49071871 49071977 -96517311 + MIR SINE MIR 39 154 -108 379 264 16 48 chr10 49072012 49072137 -96517151 + MIR SINE MIR 97 217 -45 340 330 55 38 chr10 49072186 49072444 -96516844 + L1M4 LINE L1 5488 5769 -409 1911 174 0 7 chr10 49072444 49072754 -96516534 + AluSx SINE Alu 1 308 -4 340 330 55 38 chr10 49072754 49072808 -96516480 + L1M4 LINE L1 5769 5821 -357 503 269 86 16 chr10 49074159 49074345 -96514943 - MIR SINE MIR -6 256 58 732 197 0 4 chr10 49074345 49074612 -96514676 + (TGGA)n Simple_repeat Simple_repeat 1 265 0 267 114 0 0 chr10 49074636 49074680 -96514608 + (TGGA)n Simple_repeat Simple_repeat 1 44 0 2159 171 14 43 chr10 49075796 49076235 -96513053 + MSTB LTR MaLR 1 426 0 192 318 85 24 chr10 49076264 49076475 -96512813 - L2 LINE L2 -527 2787 2564 485 262 36 90 chr10 49076497 49076842 -96512446 + MLT1F LTR MaLR 16 343 -199 401 216 31 10 chr10 49076839 49076936 -96512352 + MLT1F LTR MaLR 449 547 -48 * 6041 125 2 10 chr10 49076936 49077160 -96512128 + L1PB1 LINE L1 4770 4994 -1157 2279 113 0 7 chr10 49077160 49077469 -96511819 + AluSx SINE Alu 1 307 -5 6041 125 2 10 chr10 49077469 49078607 -96510681 + L1PB1 LINE L1 4994 6119 -32 241 267 12 21 chr10 49078609 49078721 -96510567 + MLT1H1 LTR MaLR 481 555 0 210 275 101 0 chr10 49078760 49078829 -96510459 - MIR SINE MIR -22 240 165 181 241 74 19 chr10 49079071 49079125 -96510163 + MIR SINE MIR 90 146 -62 1675 229 63 138 chr10 49079292 49080163 -96509125 + MER45C DNA AcHobo 1 806 -147 487 212 73 22 chr10 49080456 49080593 -96508695 - MER45 DNA AcHobo 0 1581 1438 376 273 230 0 chr10 49080597 49080736 -96508552 + MER5A DNA MER1_type 17 187 -2 2219 93 10 17 chr10 49080861 49081163 -96508125 + AluSx SINE Alu 1 300 -12 313 353 53 29 chr10 49081184 49081391 -96507897 - MIR SINE MIR -38 224 13 204 193 35 35 chr10 49081405 49081462 -96507826 + CT-rich Low_complexity Low_complexity 3 59 0 23 68 0 0 chr10 49082628 49082672 -96506616 + AT_rich Low_complexity Low_complexity 1 44 0 740 149 65 18 chr10 49133392 49133560 -96455728 + Charlie5 DNA MER1_type 2449 2624 0 438 340 56 5 chr10 49135371 49135586 -96453702 - MIR SINE MIR -17 245 20 317 235 12 35 chr10 49136900 49136985 -96452303 - MIR3 SINE MIR -27 181 99 207 196 0 22 chr10 49139647 49139693 -96449595 + CT-rich Low_complexity Low_complexity 5 49 0 210 59 59 44 chr10 49139719 49139787 -96449501 + A-rich Low_complexity Low_complexity 2 70 0 1396 117 5 0 chr10 49140098 49140295 -96448993 + AluSq SINE Alu 112 309 -4 2809 238 51 27 chr10 49140298 49141081 -96448207 + L1ME1 LINE L1 5359 6160 -6 344 264 34 27 chr10 49141209 49141357 -96447931 + MLT1I LTR MaLR 59 207 -202 425 298 68 42 chr10 49142074 49142265 -96447023 + MER91A DNA MER1_type 1 196 0 1661 196 32 45 chr10 49142554 49142957 -96446331 - MER63B DNA MER1_type -38 398 1 860 219 116 36 chr10 49143014 49143375 -96445913 + MLT1J1 LTR MaLR 4 393 -53 272 113 0 0 chr10 49143712 49143755 -96445533 - Alu SINE Alu -261 38 1 282 263 0 12 chr10 49144303 49144383 -96444905 + MLT1K LTR MaLR 509 587 -1 185 242 167 15 chr10 49144896 49144962 -96444326 + L2 LINE L2 1872 1947 -1367 649 317 105 35 chr10 49145197 49145405 -96443883 - L2 LINE L2 -995 2319 2127 1734 220 70 5 chr10 49145405 49145777 -96443511 + MSTD LTR MaLR 1 396 0 649 317 105 35 chr10 49145777 49146025 -96443263 - L2 LINE L2 -1187 2127 1831 3719 233 58 43 chr10 49146161 49147359 -96441929 + L1M4 LINE L1 6 1221 -5321 1160 201 27 36 chr10 49147486 49147815 -96441473 + L1M4 LINE L1 1184 1509 -5033 723 227 0 19 chr10 49147844 49147998 -96441290 + Tigger1 DNA MER2_type 13 163 -2255 * 891 188 125 0 chr10 49147979 49148171 -96441117 + Tigger1 DNA MER2_type 2202 2417 -1 14180 190 29 16 chr10 49148171 49151824 -96437464 + L1M4 LINE L1 1513 5814 -830 301 289 31 23 chr10 49152130 49152258 -96437030 - MIR SINE MIR -98 164 36 1474 225 50 19 chr10 49153461 49154140 -96435148 - L1M4 LINE L1 -3507 2875 2171 238 150 0 0 chr10 49154165 49154205 -96435083 - L1M LINE L1 -693 5428 5389 937 65 0 136 chr10 49154225 49154394 -96434894 - L1MA5 LINE L1 -2 6298 6153 472 291 51 20 chr10 49154396 49154592 -96434696 + MIR SINE MIR 28 229 -33 1963 146 10 10 chr10 49155796 49156104 -96433184 + AluSx SINE Alu 1 308 -4 466 240 32 26 chr10 49156681 49156835 -96432453 + MIR SINE MIR 29 183 -79 414 0 0 0 chr10 49157332 49157378 -96431910 + (CA)n Simple_repeat Simple_repeat 2 47 0 355 320 49 0 chr10 49158926 49159060 -96430228 + MIR SINE MIR 33 173 -63 337 349 122 0 chr10 49160301 49160473 -96428815 - MIR SINE MIR -19 243 51 740 176 93 66 chr10 49162274 49162456 -96426832 - MLT2D LTR ERVL 0 414 228 219 274 159 0 chr10 49163075 49163188 -96426100 + MIR SINE MIR 117 247 -15 930 220 5 0 chr10 49163380 49163566 -96425722 + MER5A DNA MER1_type 3 189 0 182 348 25 8 chr10 49164183 49164301 -96424987 + MIR SINE MIR 143 262 0 2908 157 36 0 chr10 49164418 49164916 -96424372 - L1MB3 LINE L1 -23 6160 5645 400 210 0 0 chr10 49165522 49165603 -96423685 + MER52A LTR ERV1 1671 1751 -4 463 273 122 6 chr10 49165969 49166141 -96423147 + MIR SINE MIR 3 194 -68 1107 138 84 97 chr10 49166326 49166646 -96422642 - MER33 DNA MER1_type -4 320 5 963 259 79 53 chr10 49166975 49167354 -96421934 + L2 LINE L2 2317 2705 -609 792 275 110 15 chr10 49167423 49167896 -96421392 + L1ME3A LINE L1 4387 4904 -1242 2245 113 0 3 chr10 49167897 49168198 -96421090 + AluSx SINE Alu 1 300 -12 1331 116 0 0 chr10 49168198 49168371 -96420917 + AluSg/x SINE Alu 132 304 -6 1692 284 44 23 chr10 49168371 49169404 -96419884 + L1ME3A LINE L1 4896 5945 -225 883 150 0 0 chr10 49169648 49169781 -96419507 - AluSq/x SINE Alu -180 133 1 182 311 0 0 chr10 49170116 49170177 -96419111 + L2 LINE L2 3253 3313 0 204 161 148 37 chr10 49171328 49171409 -96417879 + MIR SINE MIR 33 122 -86 468 121 0 12 chr10 49172037 49172120 -96417168 + AluSp/q SINE Alu 232 313 0 2433 51 7 3 chr10 49172638 49172930 -96416358 - AluY SINE Alu -18 293 1 591 341 60 10 chr10 49173115 49173429 -96415859 + L1MEc LINE L1 37 366 -6030 1796 231 87 14 chr10 49173888 49174313 -96414975 + MLT2B1 LTR ERVL 1 456 -64 267 133 0 0 chr10 49174339 49174384 -96414904 + (TA)n Simple_repeat Simple_repeat 1 45 0 1842 146 7 4 chr10 49174548 49174829 -96414459 - AluSx SINE Alu -22 290 9 2549 279 44 37 chr10 49174831 49176155 -96413133 + L1MEc LINE L1 704 2036 -4360 256 289 12 0 chr10 49176212 49176295 -96412993 - L2 LINE L2 -5 3267 3184 471 273 71 25 chr10 49176409 49176588 -96412700 - MLT1J LTR MaLR -204 270 52 264 200 0 29 chr10 49178051 49178121 -96411167 + L1M4 LINE L1 4887 4954 -1192 1227 170 74 19 chr10 49178122 49178392 -96410896 - L1 LINE L1 -1277 4869 4585 1019 245 59 9 chr10 49178398 49178767 -96410521 + L1M4 LINE L1 5003 5385 -761 579 126 0 52 chr10 49178769 49178943 -96410345 + (TA)n Simple_repeat Simple_repeat 2 166 0 245 240 0 0 chr10 49178943 49178993 -96410295 - MLT1J1 LTR MaLR -345 101 52 648 147 2 61 chr10 49179048 49179746 -96409542 + (TA)n Simple_repeat Simple_repeat 1 656 0 1991 247 73 56 chr10 49180008 49180717 -96408571 + MER21B LTR ERV1 1 725 -138 225 65 0 0 chr10 49180717 49180748 -96408540 + (AATTG)n Simple_repeat Simple_repeat 1 31 0 1991 247 73 56 chr10 49180748 49180775 -96408513 + MER21B LTR ERV1 725 750 -113 286 298 46 38 chr10 49181113 49181244 -96408044 + MER91A DNA MER1_type 45 176 -20 911 276 46 28 chr10 49182395 49182678 -96406610 + LTR16A LTR ERVL 89 376 -74 1973 224 147 18 chr10 49182684 49183339 -96405949 - L1M4 LINE L1 -1083 5063 4325 * 4230 220 33 43 chr10 49183336 49183406 -96405882 - L1M4 LINE L1 -1525 4621 4552 2257 99 0 0 chr10 49183406 49183700 -96405588 - AluSc SINE Alu -15 294 1 4230 220 33 43 chr10 49183700 49184829 -96404459 - L1M4 LINE L1 -1594 4552 3434 1613 198 139 84 chr10 49184819 49185287 -96404001 - L1MCa LINE L1 -4278 2329 1888 * 2504 83 9 0 chr10 49185287 49185624 -96403664 - L1PB2 LINE L1 0 6151 5812 1613 198 139 84 chr10 49185624 49185937 -96403351 - L1MCa LINE L1 -4719 1888 1382 334 268 10 10 chr10 49186121 49186218 -96403070 - L1MCa LINE L1 -6310 116 20 338 252 131 0 chr10 49186376 49186483 -96402805 + L2 LINE L2 3193 3313 0 516 277 74 15 chr10 49186775 49186977 -96402311 - MIR SINE MIR -12 250 37 310 240 60 4 chr10 49187524 49187651 -96401637 + MIR SINE MIR 20 149 -73 1702 148 63 56 chr10 49188015 49188393 -96400895 + MLT1B LTR MaLR 7 387 -3 608 275 104 31 chr10 49188791 49189147 -96400141 + LTR16C LTR ERVL 109 490 -1 244 254 79 0 chr10 49189178 49189259 -96400029 + MIR SINE MIR 103 191 -71 263 183 32 32 chr10 49190653 49190746 -96398542 + (TGGA)n Simple_repeat Simple_repeat 3 95 0 598 267 44 3 chr10 49191301 49191532 -96397756 + MLT2F LTR ERVL 2 325 -338 200 35 35 0 chr10 49191532 49191561 -96397727 + (TG)n Simple_repeat Simple_repeat 2 31 0 598 267 44 3 chr10 49191561 49191597 -96397691 + MLT2F LTR ERVL 325 358 -305 307 234 0 0 chr10 49191800 49191864 -96397424 - L2 LINE L2 0 3313 3250 455 266 13 60 chr10 49192030 49192263 -96397025 + L1MB5 LINE L1 17 238 -6304 6111 241 47 63 chr10 49192558 49194550 -96394738 + L1MB5 LINE L1 716 2738 -3906 13219 38 1 15 chr10 49194550 49196906 -96392382 + L1PA5 LINE L1 3803 6154 0 6111 241 47 63 chr10 49196906 49197007 -96392281 + L1MB5 LINE L1 2738 2839 -3805 2229 100 3 0 chr10 49197007 49197289 -96391999 + AluSp SINE Alu 1 286 -27 187 43 0 0 chr10 49197289 49197312 -96391976 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 6111 241 47 63 chr10 49197318 49199807 -96389481 + L1MB5 LINE L1 2839 5419 -1225 228 111 0 0 chr10 49199807 49199843 -96389445 + (CAA)n Simple_repeat Simple_repeat 2 37 0 6111 241 47 63 chr10 49199843 49200284 -96389004 + L1MB5 LINE L1 5419 5866 -778 595 181 0 0 chr10 49200287 49200381 -96388907 + AluS SINE Alu 2 95 -218 429 129 0 0 chr10 49201495 49201565 -96387723 + (GA)n Simple_repeat Simple_repeat 1 70 0 198 0 0 0 chr10 49201669 49201691 -96387597 + (T)n Simple_repeat Simple_repeat 1 22 0 1392 190 74 32 chr10 49201794 49202104 -96387184 + L1MB5 LINE L1 6342 6664 -8 502 218 85 61 chr10 49202584 49202749 -96386539 + MER5B DNA MER1_type 7 175 -3 316 307 126 64 chr10 49202929 49203271 -96386017 + L1M2 LINE L1 843 1205 -5644 268 277 36 24 chr10 49204038 49204121 -96385167 + MIR SINE MIR 86 169 -93 644 170 176 38 chr10 49205362 49205521 -96383767 + MER53 DNA DNA 6 186 -3 437 284 68 113 chr10 49205617 49206128 -96383160 - MLT1K LTR MaLR -61 527 40 212 122 24 0 chr10 49206223 49206264 -96383024 + GA-rich Low_complexity Low_complexity 1 42 0 901 125 5 27 chr10 49206297 49206481 -96382807 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 851 210 65 9 chr10 49206638 49206867 -96382421 - Charlie5 DNA MER1_type -138 2474 2233 292 180 225 22 chr10 49206873 49206962 -96382326 - Charlie5 DNA MER1_type -2505 107 1 380 293 71 30 chr10 49206963 49207161 -96382127 + L1MEc LINE L1 2021 2226 -4170 778 267 57 53 chr10 49207184 49208103 -96381185 + L1MEc LINE L1 2201 3158 -3057 1044 300 141 43 chr10 49208177 49208970 -96380318 + L2 LINE L2 2100 2970 -344 2362 78 0 0 chr10 49209012 49209320 -96379968 - AluY SINE Alu -3 308 1 222 200 46 62 chr10 49209379 49209444 -96379844 - MIR SINE MIR -109 153 90 529 320 19 10 chr10 49209470 49209676 -96379612 - MLT1K LTR MaLR -309 279 72 1659 193 55 88 chr10 49209676 49210200 -96379088 + L1MD1 LINE L1 5705 6211 -31 1688 266 85 52 chr10 49210297 49211124 -96378164 - Zaphod DNA AcHobo -3155 876 23 792 240 77 18 chr10 49211819 49212040 -96377248 + MLT1H1 LTR MaLR 322 555 0 311 244 59 42 chr10 49212073 49212192 -96377096 - L2 LINE L2 -15 3298 3178 2549 46 28 31 chr10 49212361 49212686 -96376602 - LTR17 LTR ERV1 -456 324 1 2369 79 0 0 chr10 49212686 49212978 -96376310 - HERV17 LTR ERV1 0 8626 8335 309 51 0 0 chr10 49212968 49213007 -96376281 - HERV17 LTR ERV1 -1078 7548 7510 * 8892 59 1 0 chr10 49213000 49214070 -96375218 - HERV17 LTR ERV1 -2607 6019 4949 391 314 142 5 chr10 49214152 49214356 -96374932 - MIR SINE MIR -16 246 15 2199 87 3 0 chr10 49214586 49214885 -96374403 + AluY SINE Alu 1 300 -11 2502 178 79 101 chr10 49215698 49215741 -96373547 + MER63C DNA MER1_type 2 44 -1016 201 94 0 0 chr10 49215741 49215773 -96373515 + (TA)n Simple_repeat Simple_repeat 2 33 0 2502 178 79 101 chr10 49215773 49216590 -96372698 + MER63C DNA MER1_type 44 843 -87 1128 63 0 0 chr10 49216874 49217017 -96372271 + L1MA2 LINE L1 6162 6304 0 1202 188 9 0 chr10 49217037 49217250 -96372038 - MER46A DNA MER2_type -20 216 2 244 198 49 74 chr10 49218910 49218991 -96370297 - L1M3de LINE L1 -5662 991 913 374 220 158 77 chr10 49220407 49220616 -96368672 - L1 LINE L1 -1158 4988 4763 2185 84 17 3 chr10 49220634 49220933 -96368355 + AluSq SINE Alu 1 303 -10 1481 145 0 4 chr10 49221137 49221364 -96367924 - AluSx SINE Alu -86 226 1 339 237 185 37 chr10 49221385 49221520 -96367768 - L1MC5 LINE L1 -35 7926 7772 2823 239 35 16 chr10 49221534 49222304 -96366984 - L1ME2 LINE L1 -15 6149 5365 309 182 0 64 chr10 49222325 49222512 -96366776 + (TA)n Simple_repeat Simple_repeat 2 176 0 305 261 54 11 chr10 49222526 49222618 -96366670 + L1MC4 LINE L1 6614 6709 -1333 359 167 0 65 chr10 49222622 49222919 -96366369 + (TA)n Simple_repeat Simple_repeat 1 277 0 * 501 34 0 137 chr10 49222903 49223108 -96366180 + (TATATG)n Simple_repeat Simple_repeat 1 177 0 307 276 0 13 chr10 49223123 49223199 -96366089 - L1MCa LINE L1 -4346 2080 2006 316 126 0 74 chr10 49223210 49223489 -96365799 + (TA)n Simple_repeat Simple_repeat 1 258 0 2274 239 54 17 chr10 49223777 49224427 -96364861 - L1ME1 LINE L1 -100 6066 5393 189 0 0 0 chr10 49224625 49224646 -96364642 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 234 254 136 17 chr10 49225641 49225759 -96363529 - MIR3 SINE MIR -74 134 3 208 307 169 36 chr10 49226185 49226351 -96362937 + MIR SINE MIR 64 251 -11 337 214 196 9 chr10 49226420 49226532 -96362756 - MIR SINE MIR -107 155 23 585 196 157 20 chr10 49226683 49226836 -96362452 + MER96B DNA MER1_type? 241 414 -3 218 289 70 78 chr10 49227487 49227629 -96361659 - L2 LINE L2 -959 2355 2215 273 194 306 10 chr10 49227659 49227757 -96361531 - L2 LINE L2 0 3313 3187 180 200 0 0 chr10 49227771 49227806 -96361482 - L2 LINE L2 -1099 2215 2181 384 313 28 53 chr10 49228091 49228411 -96360877 + L1ME4a LINE L1 5562 5873 -248 446 282 49 14 chr10 49228452 49228725 -96360563 + L1P5 LINE L1 5212 5493 -673 2807 6 0 0 chr10 49230576 49230887 -96358401 + AluYb8 SINE Alu 1 311 -7 1705 205 55 3 chr10 49231546 49231873 -96357415 - MLT1A1 LTR MaLR 0 365 22 237 273 141 40 chr10 49233081 49233180 -96356108 - L2 LINE L2 0 3313 3205 348 245 82 57 chr10 49233185 49233344 -96355944 + Charlie8 DNA MER1_type 17 179 -2238 339 326 43 43 chr10 49233557 49233695 -96355593 + MIR SINE MIR 14 151 -111 294 275 55 0 chr10 49235319 49235410 -96353878 - MIR SINE MIR -80 128 33 658 207 135 21 chr10 49235469 49235662 -96353626 - MIR SINE MIR -35 227 13 1443 263 68 64 chr10 49236326 49236839 -96352449 + MLT1G1 LTR MaLR 79 593 -2 2151 64 3 73 chr10 49237108 49237435 -96351853 - AluY SINE Alu -7 304 1 463 258 129 46 chr10 49238511 49238705 -96350583 + MIR SINE MIR 53 262 0 893 307 79 21 chr10 49239133 49239839 -96349449 - L1ME3A LINE L1 -250 5920 5158 446 319 92 35 chr10 49240507 49240767 -96348521 + L1M4 LINE L1 5071 5345 -801 464 261 21 26 chr10 49240882 49241083 -96348205 + L1M2 LINE L1 5491 5690 -454 227 187 8 45 chr10 49241824 49241958 -96347330 + (CA)n Simple_repeat Simple_repeat 2 130 0 456 148 11 39 chr10 49241969 49242151 -96347137 + (CA)n Simple_repeat Simple_repeat 2 178 0 374 264 110 49 chr10 49242996 49243159 -96346129 + MIR SINE MIR 15 187 -75 237 366 40 0 chr10 49243158 49243259 -96346029 - MIR SINE MIR -1 261 157 * 304 163 0 0 chr10 49243521 49243570 -96345718 - MST-int LTR MaLR -1550 101 53 305 215 0 13 chr10 49244144 49244223 -96345065 + (CA)n Simple_repeat Simple_repeat 1 78 0 330 169 0 0 chr10 49244606 49244671 -96344617 + CT-rich Low_complexity Low_complexity 4 68 0 186 413 60 0 chr10 49245236 49245437 -96343851 - MIR SINE MIR 0 262 50 187 274 94 28 chr10 49245683 49245789 -96343499 + L2 LINE L2 3152 3264 -8 268 196 0 0 chr10 49246319 49246365 -96342923 - FAM SINE Alu -17 158 113 347 179 13 26 chr10 49246582 49246660 -96342628 - MLT1J1 LTR MaLR -325 121 45 209 381 116 16 chr10 49247820 49248009 -96341279 - MIR SINE MIR -22 240 33 686 236 48 6 chr10 49248036 49248201 -96341087 + MIR SINE MIR 9 180 -82 968 259 97 32 chr10 49249375 49249777 -96339511 + LTR16C LTR ERVL 64 491 0 181 312 91 0 chr10 49251430 49251507 -96337781 - L2 LINE L2 -4 3268 3185 995 234 40 22 chr10 49252130 49252404 -96336884 - MER33 DNA MER1_type 0 324 46 593 324 35 0 chr10 49254037 49254254 -96335034 + MIR SINE MIR 33 255 -7 243 0 0 0 chr10 49254785 49254812 -96334476 + (TTCA)n Simple_repeat Simple_repeat 2 28 0 296 260 62 0 chr10 49254814 49254910 -96334378 - L2 LINE L2 -14 3299 3198 821 203 10 51 chr10 49255056 49255253 -96334035 + MER5A DNA MER1_type 1 189 0 198 103 0 0 chr10 49256003 49256032 -96333256 + (TA)n Simple_repeat Simple_repeat 1 29 0 255 301 27 81 chr10 49256152 49256267 -96333021 - MER5A DNA MER1_type -7 182 79 1870 119 6 51 chr10 49256267 49256578 -96332710 - AluSx SINE Alu -15 297 1 255 301 27 81 chr10 49256578 49256648 -96332640 - MER5A DNA MER1_type -110 79 7 435 81 95 0 chr10 49257012 49257086 -96332202 - L1MA8 LINE L1 -188 6103 6023 289 228 109 11 chr10 49257679 49257771 -96331517 - MLT1J2 LTR MaLR 0 450 350 378 291 63 15 chr10 49257807 49257972 -96331316 - MLT1J2 LTR MaLR -204 242 68 215 313 70 43 chr10 49258054 49258169 -96331119 - L2 LINE L2 -2 3270 3153 248 210 74 25 chr10 49258505 49258586 -96330702 - HAL1 LINE L1 -2337 170 86 1087 219 0 0 chr10 49258591 49258796 -96330492 - AluJo SINE Alu -107 205 1 296 393 43 0 chr10 49259308 49259448 -96329840 - MIR3 SINE MIR -15 193 48 244 283 121 62 chr10 49262404 49262743 -96326545 - L1MC4 LINE L1 -908 7134 6776 1002 93 0 0 chr10 49262827 49262967 -96326321 + AluSg/x SINE Alu 171 310 -2 216 158 0 0 chr10 49263525 49263563 -96325725 + CT-rich Low_complexity Low_complexity 2 39 0 207 306 276 0 chr10 49263977 49264075 -96325213 - L2 LINE L2 -3 3310 3186 361 301 184 14 chr10 49265867 49266226 -96323062 - L1MEd LINE L1 -2232 3897 3478 432 342 93 26 chr10 49266241 49266586 -96322702 - L1MEd LINE L1 -2696 3433 3066 479 307 64 14 chr10 49266606 49266951 -96322337 - L1MEd LINE L1 -3181 2948 2587 539 273 109 57 chr10 49267644 49269282 -96320006 - L1MEd LINE L1 -3574 2555 809 422 274 26 9 chr10 49269803 49269916 -96319372 - MIR SINE MIR -121 141 27 232 216 82 41 chr10 49270263 49270360 -96318928 + MIR3 SINE MIR 12 112 -96 277 315 115 15 chr10 49270407 49270537 -96318751 + MIR SINE MIR 20 162 -100 289 170 39 39 chr10 49270784 49271051 -96318237 + (CA)n Simple_repeat Simple_repeat 1 267 0 375 307 8 16 chr10 49271907 49272034 -96317254 + L2 LINE L2 2935 3060 -212 274 278 26 86 chr10 49272633 49272784 -96316504 - L2 LINE L2 -164 3108 2967 306 297 66 33 chr10 49273651 49273833 -96315455 + MER5A DNA MER1_type 1 188 -1 3988 206 47 10 chr10 49273872 49275360 -96313928 - L1MB5 LINE L1 -1 6173 4629 1583 209 7 44 chr10 49275357 49275769 -96313519 - L1MB5 LINE L1 -2100 4046 3650 * 654 223 52 189 chr10 49275771 49276274 -96313014 + L2 LINE L2 2880 3313 0 1385 222 51 8 chr10 49276429 49276781 -96312507 - L1ME1 LINE L1 -18 6542 6176 * 1915 249 87 91 chr10 49276780 49278664 -96310624 - L1ME1 LINE L1 -914 5626 3797 2812 237 118 35 chr10 49278698 49280640 -96308648 - L1ME1 LINE L1 -3577 2963 930 247 340 55 74 chr10 49281150 49281462 -96307826 - L1ME1 LINE L1 -6210 330 25 267 54 0 0 chr10 49281463 49281500 -96307788 + (TG)n Simple_repeat Simple_repeat 2 38 0 221 191 24 0 chr10 49281564 49281606 -96307682 - L2 LINE L2 -12 3260 3218 331 291 65 68 chr10 49282416 49283091 -96306197 - L2 LINE L2 -121 3192 2439 392 212 138 94 chr10 49283970 49284427 -96304861 - MLT1G LTR MaLR -50 536 32 450 332 31 46 chr10 49286754 49287013 -96302275 + MIR SINE MIR 7 261 -1 365 309 56 39 chr10 49287022 49287200 -96302088 - MIR SINE MIR -48 214 34 1565 180 9 29 chr10 49287798 49288114 -96301174 + AluJo SINE Alu 1 310 -2 246 153 57 169 chr10 49288319 49288443 -96300845 - MER102b DNA MER1_type 0 341 232 434 347 78 0 chr10 49288591 49288784 -96300504 + MIR SINE MIR 18 225 -37 201 387 93 22 chr10 49288863 49289186 -96300102 + L3 LINE CR1 472 817 -760 298 0 48 0 chr10 49290204 49290246 -96299042 + (GA)n Simple_repeat Simple_repeat 1 44 0 256 364 106 14 chr10 49290293 49290510 -96298778 - L2 LINE L2 -208 3064 2828 525 281 54 12 chr10 49292868 49293035 -96296253 + MIR SINE MIR 79 252 -10 218 330 107 10 chr10 49293193 49293296 -96295992 + L2 LINE L2 3111 3223 -49 656 237 76 0 chr10 49293576 49293774 -96295514 - LTR16A1 LTR ERVL 0 457 245 194 272 0 10 chr10 49293840 49293943 -96295345 + (TG)n Simple_repeat Simple_repeat 2 103 0 4414 10 0 0 chr10 49294035 49294526 -96294762 - L1PA2 LINE L1 0 6155 5665 1730 16 0 0 chr10 49294528 49294722 -96294566 + L1P2 LINE L1 5386 5579 -575 740 322 13 0 chr10 49295453 49295686 -96293602 - MER102b DNA MER1_type -103 238 3 906 191 6 0 chr10 49299094 49299251 -96290037 + FRAM SINE Alu 1 158 -18 609 205 184 0 chr10 49301078 49301268 -96288020 + MIR SINE MIR 26 250 -12 218 266 25 13 chr10 49301947 49302026 -96287262 - MER5A DNA MER1_type -95 94 15 536 244 12 41 chr10 49302288 49302460 -96286828 + MER5B DNA MER1_type 8 174 -4 494 198 9 69 chr10 49302484 49302600 -96286688 - MER20 DNA MER1_type -107 112 4 375 221 0 0 chr10 49302708 49302794 -96286494 + (TATATG)n Simple_repeat Simple_repeat 2 87 0 2047 128 3 0 chr10 49302797 49303086 -96286202 - AluSq SINE Alu -23 290 1 244 309 0 0 chr10 49303198 49303266 -96286022 - L2 LINE L2 -1 3312 3245 1037 271 113 19 chr10 49303360 49303792 -96285496 - MER90 LTR ERV1 -14 561 89 204 308 0 44 chr10 49303812 49303903 -96285385 + L2 LINE L2 3227 3313 0 297 289 88 9 chr10 49304072 49304186 -96285102 + L3 LINE CR1 751 873 -704 1358 203 77 21 chr10 49304617 49304943 -96284345 + MER2 DNA MER2_type 1 344 0 271 219 31 10 chr10 49304943 49305039 -96284249 + (TA)n Simple_repeat Simple_repeat 1 98 0 1419 148 26 4 chr10 49305225 49305454 -96283834 - MER7A DNA MER2_type -108 238 7 3748 191 43 59 chr10 49305478 49306025 -96283263 - L1MD2 LINE L1 -500 5859 5305 2332 111 0 0 chr10 49306025 49306332 -96282956 - AluSc SINE Alu 0 309 3 3748 191 43 59 chr10 49306332 49306345 -96282943 - L1MD2 LINE L1 -1054 5305 5293 2425 62 0 23 chr10 49306345 49306653 -96282635 - AluY SINE Alu -10 301 1 3748 191 43 59 chr10 49306653 49307794 -96281494 - L1MD2 LINE L1 -1066 5293 4170 255 61 0 0 chr10 49309272 49309305 -96279983 + (TCC)n Simple_repeat Simple_repeat 1 33 0 1160 38 0 38 chr10 49309305 49309491 -96279797 + (TTC)n Simple_repeat Simple_repeat 1 179 0 426 39 0 0 chr10 49309494 49309546 -96279742 + (TTCTCC)n Simple_repeat Simple_repeat 3 54 0 2041 128 0 4 chr10 49309548 49309829 -96279459 - AluSx SINE Alu -32 280 1 812 108 0 31 chr10 49310527 49310656 -96278632 - FLAM_A SINE Alu -1 141 17 742 258 105 0 chr10 49312707 49312936 -96276352 + MIR SINE MIR 7 259 -3 395 244 76 0 chr10 49312943 49313062 -96276226 + MIR SINE MIR 103 230 -32 26 0 0 0 chr10 49314203 49314229 -96275059 + AT_rich Low_complexity Low_complexity 1 26 0 412 328 23 0 chr10 49314609 49314737 -96274551 - L2 LINE L2 -5 3267 3137 241 299 117 24 chr10 49316333 49316667 -96272621 - L2 LINE L2 -94 3219 2855 26 0 0 0 chr10 49317344 49317370 -96271918 + AT_rich Low_complexity Low_complexity 1 26 0 1037 134 51 0 chr10 49319099 49319256 -96270032 - MSTB LTR MaLR -261 165 1 363 243 32 81 chr10 49319256 49319441 -96269847 - L1MDa LINE L1 -4198 2342 2167 258 288 72 20 chr10 49321462 49321615 -96267673 + L2 LINE L2 2951 3111 -202 207 250 0 21 chr10 49321684 49321732 -96267556 + CT-rich Low_complexity Low_complexity 2 48 0 2664 231 72 37 chr10 49321977 49322461 -96266827 - L1M4 LINE L1 -1638 4508 3977 2194 33 0 26 chr10 49322461 49322734 -96266554 - L1PA4 LINE L1 0 6155 5890 2664 231 72 37 chr10 49322734 49323135 -96266153 - L1M4 LINE L1 -2168 3978 3592 1653 226 16 25 chr10 49323161 49323529 -96265759 + MLT1A1 LTR MaLR 1 365 0 252 213 21 0 chr10 49323530 49323577 -96265711 - L1M4 LINE L1 -2577 3569 3522 1305 88 0 0 chr10 49323719 49323878 -96265410 - AluSq SINE Alu -149 164 6 1100 238 75 18 chr10 49324865 49325831 -96263457 + L1ME1 LINE L1 4638 5368 -778 1178 167 39 14 chr10 49325844 49326255 -96263033 + Tigger7 DNA MER2_type 1 500 -233 924 137 104 11 chr10 49326254 49326437 -96262851 + Tigger7 DNA MER2_type 2288 2487 -4 * 1046 249 72 16 chr10 49326442 49326819 -96262469 + L1ME1 LINE L1 5790 6140 -26 492 171 0 63 chr10 49327165 49327276 -96262012 + MER53 DNA DNA 4 107 -82 212 99 56 28 chr10 49327539 49327610 -96261678 + G-rich Low_complexity Low_complexity 2 74 0 27 29 0 0 chr10 49329127 49329161 -96260127 + AT_rich Low_complexity Low_complexity 1 34 0 1430 113 0 5 chr10 49329268 49329463 -96259825 + AluYa5 SINE Alu 1 194 -117 238 308 0 0 chr10 49330429 49330501 -96258787 + (TCCA)n Simple_repeat Simple_repeat 1 72 0 1893 181 47 21 chr10 49331962 49332348 -96256940 - MSTD LTR MaLR 0 396 1 251 196 0 0 chr10 49332497 49332543 -96256745 - MIR SINE MIR -57 151 106 324 83 0 0 chr10 49332909 49332957 -96256331 + (TCTA)n Simple_repeat Simple_repeat 4 51 0 529 293 18 18 chr10 49333416 49333583 -96255705 - MER5A DNA MER1_type -16 173 7 615 227 153 42 chr10 49334293 49334606 -96254682 - L1ME3 LINE L1 -2 6160 5813 1704 178 51 42 chr10 49334617 49334833 -96254455 - Charlie1 DNA MER1_type 0 2761 2548 1573 180 62 9 chr10 49334833 49335155 -96254133 + MER44D DNA MER2_type 1 609 0 1704 178 51 42 chr10 49335155 49335371 -96253917 - Charlie1 DNA MER1_type -213 2548 2325 995 190 34 5 chr10 49335372 49335577 -96253711 + Charlie1 DNA MER1_type 2178 2388 -373 403 340 15 25 chr10 49336633 49336830 -96252458 - MIR SINE MIR -48 214 20 210 337 0 23 chr10 49337585 49337671 -96251617 + L2 LINE L2 3188 3271 -1 1331 176 13 25 chr10 49337810 49338127 -96251161 + MLT1B LTR MaLR 1 314 -153 207 311 118 17 chr10 49338962 49339081 -96250207 - MIR SINE MIR -112 150 20 2440 248 63 24 chr10 49340751 49342150 -96247138 + L1MEc LINE L1 1557 3002 -3538 818 173 20 149 chr10 49342150 49342399 -96246889 - MER20 DNA MER1_type -1 218 2 2440 248 63 24 chr10 49342399 49342526 -96246762 + L1MEc LINE L1 3002 3123 -3417 2091 141 0 0 chr10 49343322 49343620 -96245668 - AluJo SINE Alu -14 298 1 414 303 114 37 chr10 49343678 49343975 -96245313 - MER102a DNA MER1_type -5 325 6 2271 95 3 10 chr10 49344820 49345116 -96244172 + AluSx SINE Alu 1 294 -18 288 143 0 0 chr10 49345439 49345495 -96243793 + (TG)n Simple_repeat Simple_repeat 2 57 0 469 253 67 55 chr10 49345700 49345953 -96243335 - L1ME4a LINE L1 -234 5887 5632 656 327 55 6 chr10 49346681 49346993 -96242295 - L2 LINE L2 -824 2490 2164 184 121 30 0 chr10 49347287 49347320 -96241968 + CT-rich Low_complexity Low_complexity 4 37 0 221 83 28 0 chr10 49348239 49348275 -96241013 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 488 278 156 19 chr10 49349407 49349612 -96239676 - MIR SINE MIR -2 260 28 349 184 15 4 chr10 49351313 49351441 -96237847 - MER53 DNA DNA 0 189 2 267 31 0 0 chr10 49351882 49351914 -96237374 + (TG)n Simple_repeat Simple_repeat 2 33 0 328 320 0 8 chr10 49352140 49352268 -96237020 - MER113 DNA MER1_type? -387 134 8 415 218 23 0 chr10 49352280 49352367 -96236921 + MIR SINE MIR 55 143 -119 190 154 51 0 chr10 49352401 49352440 -96236848 + MIR SINE MIR 222 262 0 460 218 177 16 chr10 49352490 49352614 -96236674 + MER5B DNA MER1_type 7 150 -28 286 376 20 13 chr10 49353319 49353468 -96235820 + MIR SINE MIR 2 151 -111 306 0 0 0 chr10 49353488 49353522 -96235766 + (TG)n Simple_repeat Simple_repeat 1 34 0 * 324 0 0 0 chr10 49353521 49353557 -96235731 + (GA)n Simple_repeat Simple_repeat 1 36 0 270 284 187 7 chr10 49354231 49354386 -96234902 - MIR SINE MIR -60 202 20 2026 132 0 22 chr10 49356221 49356540 -96232748 - AluSq SINE Alu -1 312 1 246 62 0 0 chr10 49356643 49356675 -96232613 + (TG)n Simple_repeat Simple_repeat 1 32 0 229 337 22 22 chr10 49357722 49357811 -96231477 - L1ME4a LINE L1 -2176 5632 5544 22 56 0 0 chr10 49359016 49359052 -96230236 + AT_rich Low_complexity Low_complexity 1 36 0 225 314 37 23 chr10 49359253 49359350 -96229938 + MIR SINE MIR 19 115 -105 414 0 0 0 chr10 49360916 49360962 -96228326 + (CA)n Simple_repeat Simple_repeat 2 47 0 198 262 0 0 chr10 49361157 49361199 -96228089 + MIR SINE MIR 107 148 -60 344 273 23 0 chr10 49363299 49363387 -96225901 + MIR SINE MIR 51 140 -122 349 282 144 48 chr10 49364287 49364475 -96224813 + MIR SINE MIR 51 256 -6 239 320 51 51 chr10 49365491 49365647 -96223641 + MIR3 SINE MIR 44 199 -9 191 219 27 68 chr10 49365649 49365722 -96223566 - MIR SINE MIR -15 247 178 2406 163 55 2 chr10 49365726 49366181 -96223107 - L1MB3 LINE L1 -9 6174 5696 988 193 0 0 chr10 49367105 49367266 -96222022 - FRAM SINE Alu -8 168 8 860 170 66 28 chr10 49367598 49367780 -96221508 + MER5A DNA MER1_type 1 189 0 215 286 71 0 chr10 49369167 49369237 -96220051 - MIR SINE MIR -139 123 49 878 276 158 50 chr10 49369300 49369641 -96219647 + LTR16A LTR ERVL 1 378 -79 571 321 174 41 chr10 49370323 49371047 -96218241 - L2 LINE L2 -2 3270 2461 336 175 0 0 chr10 49371070 49371133 -96218155 + G-rich Low_complexity Low_complexity 3 65 0 697 228 60 35 chr10 49371299 49371584 -96217704 - L1MC4a LINE L1 -1875 5933 5642 2412 70 0 10 chr10 49371584 49371883 -96217405 - AluY SINE Alu -15 296 1 192 293 48 54 chr10 49371885 49372032 -96217256 - L2 LINE L2 -1606 1708 1563 2069 138 0 0 chr10 49372370 49372732 -96216556 - AluSx SINE Alu 0 362 1 251 403 0 15 chr10 49373658 49373792 -96215496 + MIR SINE MIR 20 151 -111 1428 208 60 7 chr10 49373792 49374076 -96215212 + AluJo SINE Alu 1 299 -13 239 308 148 47 chr10 49376724 49376893 -96212395 + L2 LINE L2 3081 3266 -6 954 290 89 33 chr10 49383442 49383991 -96205297 + MLT1K LTR MaLR 1 580 -8 2587 281 109 32 chr10 49384253 49385272 -96204016 + L2 LINE L2 1870 3053 -260 2266 97 3 3 chr10 49385272 49385562 -96203726 - AluSx SINE Alu -22 290 1 2587 281 109 32 chr10 49385562 49385841 -96203447 + L2 LINE L2 3053 3309 -4 370 104 0 60 chr10 49386812 49386879 -96202409 - THE1C LTR MaLR -312 63 1 7421 240 29 26 chr10 49386887 49389269 -96200019 - L1MC4a LINE L1 -1025 5121 2734 2093 108 4 0 chr10 49389678 49390021 -96199267 + AluSx SINE Alu 16 359 0 212 292 255 10 chr10 49390365 49390557 -96198731 + MIR SINE MIR 20 258 -4 347 281 36 36 chr10 49392676 49392815 -96196473 - MLT1K LTR MaLR -1 587 449 243 327 73 18 chr10 49392914 49393024 -96196264 - MLT1K LTR MaLR -422 166 51 1256 206 15 71 chr10 49393055 49393381 -96195907 + AluJo SINE Alu 1 308 -4 2290 75 7 7 chr10 49393739 49394034 -96195254 - AluY SINE Alu -16 295 1 1581 178 3 25 chr10 49394273 49394559 -96194729 - AluJo SINE Alu -15 297 18 291 288 15 45 chr10 49394706 49394838 -96194450 - MIR SINE MIR -17 245 118 276 333 175 11 chr10 49395121 49395298 -96193990 + MIR SINE MIR 31 236 -26 245 227 182 38 chr10 49395323 49395455 -96193833 - Tigger8 DNA MER2_type -347 319 169 316 312 55 0 chr10 49395678 49395787 -96193501 - MIR3 SINE MIR -2 206 92 28 0 0 0 chr10 49397454 49397482 -96191806 + AT_rich Low_complexity Low_complexity 1 28 0 35 24 0 0 chr10 49397994 49398036 -96191252 + AT_rich Low_complexity Low_complexity 1 42 0 1915 167 0 0 chr10 49398233 49398520 -96190768 - AluJb SINE Alu -25 287 1 368 338 127 26 chr10 49399116 49399344 -96189944 + MIR SINE MIR 12 262 0 333 243 107 19 chr10 49399349 49399452 -96189836 + L1ME4a LINE L1 6008 6119 -2 592 253 101 0 chr10 49400162 49400340 -96188948 - MER115 DNA AcHobo -10 683 488 706 307 62 0 chr10 49400381 49400655 -96188633 - MER115 DNA AcHobo -285 408 118 419 368 67 5 chr10 49400718 49400941 -96188347 + MIR SINE MIR 23 259 -3 702 238 0 0 chr10 49402000 49402143 -96187145 + MER20 DNA MER1_type 1 143 -76 929 262 71 47 chr10 49402296 49402830 -96186458 - MLT1E2 LTR MaLR 0 626 80 235 335 39 29 chr10 49405233 49405285 -96184003 - MIR SINE MIR -52 210 160 2073 179 67 8 chr10 49405285 49405687 -96183601 - MSTB LTR MaLR 0 426 1 235 335 39 29 chr10 49405687 49405802 -96183486 - MIR SINE MIR -102 160 20 198 0 0 0 chr10 49406194 49406216 -96183072 + (TG)n Simple_repeat Simple_repeat 2 23 0 774 205 60 12 chr10 49407883 49408049 -96181239 - MER45A DNA AcHobo -4 174 1 2237 112 0 7 chr10 49409213 49409508 -96179780 + AluSq SINE Alu 1 293 -20 206 286 38 48 chr10 49410804 49410909 -96178379 + MIR SINE MIR 30 133 -75 1197 165 57 138 chr10 49411264 49411670 -96177618 - MLT1A2 LTR MaLR -1 373 1 458 272 98 62 chr10 49411824 49412048 -96177240 - MIR SINE MIR -16 246 15 378 0 0 0 chr10 49412787 49412829 -96176459 + (TG)n Simple_repeat Simple_repeat 1 42 0 198 0 0 0 chr10 49412828 49412850 -96176438 + (GA)n Simple_repeat Simple_repeat 1 22 0 * 1032 266 87 28 chr10 49412876 49413307 -96175981 - MLT1G1 LTR MaLR -84 446 6 956 269 101 19 chr10 49414716 49415140 -96174148 - L2 LINE L2 0 3313 2855 27 29 0 0 chr10 49415811 49415845 -96173443 + AT_rich Low_complexity Low_complexity 1 34 0 582 206 21 21 chr10 49416625 49416766 -96172522 + L1MD3 LINE L1 7837 7977 -18 594 203 20 61 chr10 49418235 49418432 -96170856 - L1MC5 LINE L1 -51 7910 7722 405 129 0 0 chr10 49420060 49420130 -96169158 + (CA)n Simple_repeat Simple_repeat 2 71 0 250 231 0 0 chr10 49420153 49420205 -96169083 + (CA)n Simple_repeat Simple_repeat 1 52 0 330 224 97 109 chr10 49420932 49421097 -96168191 - L1MCa LINE L1 -4053 2373 2211 207 257 68 0 chr10 49422093 49422167 -96167121 + MER91A DNA MER1_type 84 162 -34 21 0 0 0 chr10 49423481 49423502 -96165786 + AT_rich Low_complexity Low_complexity 1 21 0 2219 120 0 3 chr10 49423969 49424268 -96165020 + AluSq SINE Alu 1 298 -15 393 308 177 25 chr10 49424464 49424831 -96164457 - L2 LINE L2 -73 3240 2818 280 226 71 12 chr10 49424992 49425076 -96164212 - L2 LINE L2 -14 3258 3170 250 318 55 0 chr10 49425571 49425681 -96163607 - L2 LINE L2 0 3272 3157 274 361 42 21 chr10 49425714 49425978 -96163310 + L2 LINE L2 2691 2962 -310 2071 189 21 0 chr10 49426689 49427071 -96162217 - MLT1B LTR MaLR 0 390 1 252 164 27 14 chr10 49429095 49429168 -96160120 + GA-rich Low_complexity Low_complexity 2 75 0 6635 84 10 3 chr10 49430399 49432018 -96157270 + L1PA10 LINE L1 4552 6163 -5 1384 217 3 40 chr10 49432025 49432329 -96156959 + AluJo SINE Alu 1 293 -19 285 356 49 31 chr10 49432595 49432758 -96156530 - MIR SINE MIR -15 247 82 464 314 79 35 chr10 49433546 49433836 -96155452 + L3 LINE CR1 1273 1575 -2 236 321 91 18 chr10 49434981 49435146 -96154142 - MIR SINE MIR -37 225 49 181 364 13 13 chr10 49435399 49435476 -96153812 - L2 LINE L2 -1 3271 3195 204 343 56 9 chr10 49435517 49435625 -96153663 + L3 LINE CR1 1337 1449 -128 404 192 87 76 chr10 49436184 49436356 -96152932 + LTR16A1 LTR ERVL 269 442 -15 234 318 11 11 chr10 49436819 49436907 -96152381 - MIR SINE MIR -106 156 69 185 268 36 0 chr10 49437003 49437059 -96152229 + MIR SINE MIR 85 142 -66 224 261 230 39 chr10 49437283 49437479 -96151809 - MIR3 SINE MIR -11 197 1 214 211 19 19 chr10 49439708 49439760 -96149528 - L3b LINE CR1 -3 1580 1529 331 242 63 0 chr10 49440247 49440342 -96148946 - MIR SINE MIR -21 241 141 661 300 222 47 chr10 49440789 49441638 -96147650 + L1MC/D LINE L1 2917 3929 -2217 1355 164 5 5 chr10 49441658 49441871 -96147417 + AluSg/x SINE Alu 87 299 -13 499 282 127 81 chr10 49441931 49442350 -96146938 + L1MC/D LINE L1 5315 5752 -2056 326 289 89 15 chr10 49442474 49442609 -96146679 + HAL1b LINE L1 1203 1347 -1 423 353 58 27 chr10 49443742 49443966 -96145322 + MIR SINE MIR 8 238 -24 257 332 41 59 chr10 49444651 49444865 -96144423 - L2 LINE L2 -1493 1821 1611 2158 136 3 0 chr10 49444865 49445175 -96144113 + AluSx SINE Alu 1 311 -1 307 264 35 104 chr10 49446008 49446152 -96143136 - L2 LINE L2 0 3313 3180 2314 199 42 6 chr10 49446776 49447279 -96142009 - L1MD3 LINE L1 -71 7924 7404 297 217 22 33 chr10 49447279 49447371 -96141917 - MLT1F1 LTR MaLR -442 125 35 595 191 23 29 chr10 49447371 49447544 -96141744 - L1MD3 LINE L1 -879 7116 6945 631 292 41 8 chr10 49447668 49447911 -96141377 - MLT1I LTR MaLR 0 409 159 360 390 57 0 chr10 49448167 49448308 -96140980 + MER91A DNA MER1_type 1 149 -47 269 208 177 27 chr10 49449328 49449477 -96139811 + MIR3 SINE MIR 14 189 -64 204 347 234 22 chr10 49449994 49450738 -96138550 + L2 LINE L2 1793 2716 -598 198 143 0 0 chr10 49450985 49451020 -96138268 + MIR SINE MIR 218 252 -10 2046 117 3 7 chr10 49451343 49451625 -96137663 - AluSq SINE Alu -32 281 1 6523 221 74 31 chr10 49451628 49453817 -96135471 - L1MDa LINE L1 -852 5688 3596 1526 204 79 28 chr10 49453817 49454170 -96135118 - MLT1A2 LTR MaLR 0 374 4 6523 221 74 31 chr10 49454170 49455796 -96133492 - L1MDa LINE L1 -2944 3596 1012 367 143 0 48 chr10 49455807 49455891 -96133397 - L1MB8 LINE L1 0 6178 6099 2738 106 21 23 chr10 49455927 49456313 -96132975 + MER1A DNA MER1_type 145 529 0 3359 207 42 9 chr10 49456313 49457058 -96132230 - L1MB8 LINE L1 -72 6106 5338 274 314 70 19 chr10 49457465 49457621 -96131667 + MIR SINE MIR 39 202 -60 284 239 87 0 chr10 49457803 49457895 -96131393 - L2 LINE L2 -3 3269 3170 423 325 82 25 chr10 49458374 49458728 -96130560 - L1ME4a LINE L1 -174 5947 5574 624 261 58 80 chr10 49458947 49459499 -96129789 + L1 LINE L1 2939 3478 -2668 241 329 66 22 chr10 49459595 49459732 -96129556 + L1 LINE L1 3620 3762 -2384 195 222 0 0 chr10 49460142 49460187 -96129101 + A-rich Low_complexity Low_complexity 2 46 0 2051 118 14 0 chr10 49460369 49460666 -96128622 + AluSq SINE Alu 1 301 -12 2270 110 3 0 chr10 49460756 49461056 -96128232 - AluSc SINE Alu -8 301 1 651 48 0 0 chr10 49461543 49461626 -96127662 + (TTTC)n Simple_repeat Simple_repeat 2 84 0 2064 136 0 0 chr10 49461628 49461914 -96127374 - AluSx SINE Alu -26 286 1 259 341 29 43 chr10 49462836 49462974 -96126314 + MIR SINE MIR 16 151 -111 1532 208 60 7 chr10 49462974 49463258 -96126030 + AluJb SINE Alu 1 299 -3 284 306 54 34 chr10 49463703 49463850 -96125438 + MIR SINE MIR 45 194 -68 311 192 0 55 chr10 49464549 49464622 -96124666 - MLT1K LTR MaLR -3 585 517 216 174 0 65 chr10 49464622 49464668 -96124620 + polypurine Low_complexity Low_complexity 1 43 0 327 269 138 53 chr10 49464673 49464956 -96124332 - MLT1K LTR MaLR -62 526 220 993 201 0 42 chr10 49467639 49467853 -96121435 - MER3 DNA MER1_type 0 209 5 232 256 128 0 chr10 49467871 49467957 -96121331 - MIR SINE MIR -63 199 103 195 366 85 0 chr10 49468353 49468435 -96120853 + L2 LINE L2 3168 3256 -16 324 333 0 10 chr10 49469386 49469488 -96119800 - L2 LINE L2 -2 3311 3211 258 296 0 0 chr10 49469589 49469660 -96119628 - MIR3 SINE MIR -3 205 135 596 309 64 20 chr10 49469674 49469817 -96119471 + MIR SINE MIR 3 163 -99 451 139 13 0 chr10 49469817 49469896 -96119392 + MADE1 DNA Mariner 1 80 0 596 309 64 20 chr10 49469896 49470001 -96119287 + MIR SINE MIR 163 262 0 1201 305 153 28 chr10 49470798 49471848 -96117440 - L2 LINE L2 -966 2348 1167 504 105 0 0 chr10 49471878 49471954 -96117334 + (TA)n Simple_repeat Simple_repeat 2 77 0 4294 194 37 53 chr10 49472387 49473407 -96115881 + Charlie1a DNA MER1_type 2 1005 -450 593 62 21 83 chr10 49473416 49473512 -96115776 + L1PA7 LINE L1 6065 6154 0 1025 185 34 5 chr10 49473526 49473731 -96115557 - Charlie1 DNA MER1_type -373 2388 2178 1753 178 51 42 chr10 49473732 49473948 -96115340 + Charlie1 DNA MER1_type 2325 2538 -223 1669 180 62 9 chr10 49473948 49474270 -96115018 - MER44D DNA MER2_type 0 609 1 1753 178 51 42 chr10 49474270 49474486 -96114802 + Charlie1 DNA MER1_type 2538 2761 0 645 230 153 42 chr10 49474497 49474810 -96114478 + L1ME3 LINE L1 5813 6160 -2 181 362 32 43 chr10 49475090 49475278 -96114010 + L3 LINE CR1 1198 1383 -194 199 304 108 0 chr10 49475369 49475471 -96113817 + MIR3 SINE MIR 94 206 -2 1275 157 30 38 chr10 49475586 49475848 -96113440 + AluJo SINE Alu 1 260 -52 2677 216 36 58 chr10 49526278 49527052 -96062236 - L1ME1 LINE L1 0 6166 5410 268 191 27 0 chr10 49527364 49527438 -96061850 + L1P1 LINE L1 5376 5452 -669 1049 179 36 30 chr10 49527809 49528047 -96061241 + L1MC1 LINE L1 5596 5832 -501 2207 79 0 0 chr10 49528047 49528313 -96060975 + AluSq SINE Alu 1 266 -47 405 188 0 0 chr10 49528423 49528508 -96060780 + (CAT)n Simple_repeat Simple_repeat 2 86 0 22 56 0 0 chr10 49528750 49528786 -96060502 + AT_rich Low_complexity Low_complexity 1 36 0 1821 163 10 16 chr10 49529771 49530078 -96059210 + AluJo SINE Alu 1 305 -7 1848 185 68 8 chr10 49530435 49530802 -96058486 - MSTB LTR MaLR -37 389 1 180 0 0 0 chr10 49531310 49531330 -96057958 + (TG)n Simple_repeat Simple_repeat 2 21 0 2337 116 0 0 chr10 49532092 49532403 -96056885 - AluSx SINE Alu -1 311 1 275 49 24 0 chr10 49532859 49532900 -96056388 + (TTTTTG)n Simple_repeat Simple_repeat 2 43 0 255 300 33 17 chr10 49533488 49533608 -96055680 - MIR SINE MIR -119 143 22 205 260 0 0 chr10 49533813 49533863 -96055425 + GA-rich Low_complexity Low_complexity 1 50 0 216 0 0 0 chr10 49533915 49533939 -96055349 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1145 146 59 5 chr10 49534744 49534963 -96054325 - L1MB3 LINE L1 0 6183 5953 3758 72 20 12 chr10 49534963 49535473 -96053815 - L1PA10 LINE L1 0 6168 5654 1621 161 7 14 chr10 49535477 49535769 -96053519 - L1MB3 LINE L1 -235 5948 5659 7133 130 35 2 chr10 49535844 49535883 -96053405 - HSMAR2 DNA Mariner 0 1302 1266 396 0 0 0 chr10 49535883 49535927 -96053361 + (TA)n Simple_repeat Simple_repeat 1 44 0 7133 130 35 2 chr10 49535927 49536993 -96052295 - HSMAR2 DNA Mariner -36 1266 160 310 205 133 0 chr10 49537005 49537088 -96052200 + MER69 DNA AcHobo 2175 2268 -258 2224 14 11 21 chr10 49537088 49537370 -96051918 - L1P1 LINE L1 -331 5824 5546 2975 151 16 4 chr10 49537470 49537974 -96051314 + L1MC1 LINE L1 5823 6332 -1 346 303 13 13 chr10 49538536 49538691 -96050597 - L1MC4a LINE L1 -1775 6033 5879 1092 324 63 16 chr10 49538705 49539276 -96050012 - L1MC4a LINE L1 -1954 5854 5257 193 367 14 0 chr10 49539485 49539569 -96049719 + MIR SINE MIR 66 151 -57 6695 34 0 0 chr10 49541022 49541812 -96047476 - L1P LINE L1 -889 5257 4468 969 126 19 0 chr10 49541812 49541971 -96047317 - HSMAR2 DNA Mariner -1139 163 2 437 265 128 44 chr10 49543487 49543895 -96045393 + L2 LINE L2 2818 3259 -54 864 182 30 21 chr10 49544043 49544279 -96045009 + Charlie5 DNA MER1_type 2369 2606 -6 672 212 70 24 chr10 49544679 49544906 -96044382 - L1ME LINE L1 -685 5477 5241 1773 190 0 3 chr10 49544910 49545221 -96044067 + AluSx SINE Alu 3 312 0 262 197 16 80 chr10 49545240 49545428 -96043860 + (CAAAG)n Simple_repeat Simple_repeat 3 178 0 * 346 144 48 68 chr10 49545316 49545462 -96043826 + (CACAG)n Simple_repeat Simple_repeat 2 144 0 228 35 0 0 chr10 49545462 49545491 -96043797 + (CAAAG)n Simple_repeat Simple_repeat 2 30 0 239 241 19 0 chr10 49545491 49545545 -96043743 + GA-rich Low_complexity Low_complexity 2 56 0 1256 298 39 12 chr10 49545546 49546106 -96043182 - L1ME LINE L1 -894 5252 4678 228 67 0 0 chr10 49546133 49546163 -96043125 + (TC)n Simple_repeat Simple_repeat 1 30 0 2611 206 41 141 chr10 49546181 49546502 -96042786 + L1MD3 LINE L1 6151 6503 159 594 214 24 1 chr10 49546502 49546632 -96042656 + MLT1F1 LTR MaLR 1 133 -442 2611 206 41 141 chr10 49546632 49546797 -96042491 + L1MD3 LINE L1 6503 5878 -466 1687 157 71 41 chr10 49546797 49547161 -96042127 + THE1C LTR MaLR 1 375 0 2611 206 41 141 chr10 49547161 49547587 -96041701 + L1MD3 LINE L1 5877 6344 0 255 193 24 72 chr10 49548335 49548418 -96040870 - MIR SINE MIR -67 195 117 210 269 30 0 chr10 49549960 49550027 -96039261 + MIR SINE MIR 59 127 -135 279 342 75 12 chr10 49550181 49550342 -96038946 - MIR SINE MIR -29 233 63 27 29 0 0 chr10 49552278 49552312 -96036976 + AT_rich Low_complexity Low_complexity 1 34 0 1785 106 0 23 chr10 49552419 49552684 -96036604 + AluY SINE Alu 1 259 -52 233 130 14 43 chr10 49552854 49552923 -96036365 + CT-rich Low_complexity Low_complexity 1 67 0 246 260 16 55 chr10 49552924 49553051 -96036237 + (CCCCG)n Simple_repeat Simple_repeat 3 124 0 412 233 196 8 chr10 49553446 49553579 -96035709 - MER5A DNA MER1_type -6 183 26 4687 164 33 16 chr10 49553744 49554765 -96034523 + L1MB3 LINE L1 5137 6176 -7 2134 139 0 10 chr10 49556422 49556732 -96032556 - AluSx SINE Alu -5 307 1 209 300 0 0 chr10 49556907 49556957 -96032331 + MIR SINE MIR 201 250 -12 231 255 50 99 chr10 49558703 49558864 -96030424 + MIR SINE MIR 49 201 -61 814 273 39 19 chr10 49558992 49559248 -96030040 - L2 LINE L2 -233 3080 2820 342 271 47 47 chr10 49559678 49559807 -96029481 - MIR SINE MIR -120 142 14 221 0 35 0 chr10 49560178 49560207 -96029081 + (TTCA)n Simple_repeat Simple_repeat 2 31 0 308 265 121 30 chr10 49561108 49561240 -96028048 + L2 LINE L2 3167 3310 -3 226 294 0 15 chr10 49561584 49561652 -96027636 - Charlie8 DNA MER1_type -2346 71 5 765 227 32 51 chr10 49562310 49562526 -96026762 + MER58 DNA MER1_type 46 257 -84 1169 236 55 3 chr10 49562527 49562924 -96026364 - L1ME LINE L1 -571 5595 5179 2911 73 36 88 chr10 49562924 49563392 -96025896 + MLT2A1 LTR ERVL 1 444 0 42126 70 13 11 chr10 49563392 49564467 -96024821 + HERVL-A1 LTR ERVL 1 1073 -4581 2514 71 3 3 chr10 49564467 49564778 -96024510 - AluY SINE Alu 0 311 1 42126 70 13 11 chr10 49564778 49569348 -96019940 + HERVL-A1 LTR ERVL 1073 5654 0 2767 78 36 3 chr10 49569348 49569735 -96019553 + MLT2A1 LTR ERVL 1 400 -44 348 240 0 62 chr10 49569753 49569849 -96019439 + L1MC4 LINE L1 6614 6703 -1339 305 270 0 100 chr10 49569775 49569875 -96019413 - L1MC4 LINE L1 -1339 6703 6614 * 303 356 0 0 chr10 49569821 49569911 -96019377 + L1MC4 LINE L1 6614 6703 -1339 * 355 109 0 0 chr10 49569928 49569983 -96019305 + MLT2A2 LTR ERVL 399 453 0 2547 220 77 20 chr10 49569983 49570778 -96018510 - L1ME LINE L1 -963 5183 4344 312 287 11 0 chr10 49570785 49570872 -96018416 - L2 LINE L2 -802 2512 2425 348 332 63 16 chr10 49570965 49571155 -96018133 - MIR SINE MIR -17 245 47 261 292 48 60 chr10 49571760 49571928 -96017360 - MIR SINE MIR -40 222 57 186 43 0 0 chr10 49571962 49571985 -96017303 + (GGA)n Simple_repeat Simple_repeat 2 24 0 241 242 16 0 chr10 49572080 49572142 -96017146 + L3 LINE CR1 1413 1475 -102 468 300 0 23 chr10 49572335 49572465 -96016823 + MIR3 SINE MIR 28 154 -54 213 233 0 0 chr10 49572597 49572640 -96016648 + (TGAA)n Simple_repeat Simple_repeat 3 45 0 450 308 15 0 chr10 49572708 49572841 -96016447 + MER91B DNA MER1_type 15 149 -41 410 233 0 0 chr10 49573570 49573660 -96015628 + MER53 DNA DNA 6 95 -94 26 0 0 0 chr10 49574500 49574526 -96014762 + AT_rich Low_complexity Low_complexity 1 26 0 188 239 87 0 chr10 49574557 49574603 -96014685 - MIR SINE MIR -96 166 117 1584 170 143 0 chr10 49575897 49576232 -96013056 + MLT1B LTR MaLR 8 390 0 180 111 0 0 chr10 49578568 49578595 -96010693 + (CACCC)n Simple_repeat Simple_repeat 4 30 0 1041 65 0 0 chr10 49581026 49581164 -96008124 + (TCCA)n Simple_repeat Simple_repeat 1 138 0 182 311 0 0 chr10 49581609 49581654 -96007634 + L2 LINE L2 3215 3259 -13 287 130 0 0 chr10 49582136 49582182 -96007106 + MIR SINE MIR 75 120 -142 188 270 66 86 chr10 49582457 49582609 -96006679 - L3b LINE CR1 -247 1336 1188 846 184 0 0 chr10 49583197 49583376 -96005912 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 270 95 0 0 chr10 49583483 49583525 -96005763 + (TG)n Simple_repeat Simple_repeat 2 43 0 24 0 0 0 chr10 49583530 49583554 -96005734 + AT_rich Low_complexity Low_complexity 1 24 0 794 197 0 6 chr10 49584856 49585034 -96004254 + (TCCA)n Simple_repeat Simple_repeat 1 177 0 445 70 0 0 chr10 49586207 49586278 -96003010 - AluSc SINE Alu 0 309 239 329 325 92 6 chr10 49586764 49586927 -96002361 - MIR SINE MIR -65 197 21 22 0 0 0 chr10 49587480 49587502 -96001786 + AT_rich Low_complexity Low_complexity 1 22 0 221 271 34 0 chr10 49587857 49587916 -96001372 + GA-rich Low_complexity Low_complexity 1 61 0 241 297 48 48 chr10 49588177 49588342 -96000946 + HAL1 LINE L1 1524 1688 -819 286 376 20 13 chr10 49588939 49589088 -96000200 + MIR SINE MIR 2 151 -111 252 0 0 0 chr10 49589107 49589135 -96000153 + (TG)n Simple_repeat Simple_repeat 1 28 0 686 137 65 0 chr10 49589287 49589411 -95999877 - AluSq/x SINE Alu -180 133 2 812 246 11 0 chr10 49589443 49589622 -95999666 + MER5A DNA MER1_type 6 186 -3 404 324 29 6 chr10 49590908 49591078 -95998210 + L1ME LINE L1 5628 5801 -320 186 323 15 92 chr10 49591276 49591406 -95997882 + L3b LINE CR1 1409 1528 -55 2380 71 0 0 chr10 49592123 49592403 -95996885 - AluY SINE Alu -16 295 16 278 148 74 0 chr10 49592594 49592648 -95996640 + MIR SINE MIR 112 169 -93 441 355 0 29 chr10 49592819 49592991 -95996297 + MIR SINE MIR 86 252 -10 208 308 132 0 chr10 49595441 49595532 -95993756 - MIR SINE MIR -87 175 73 439 302 9 0 chr10 49596381 49596487 -95992801 - MIR SINE MIR -143 119 13 228 297 10 10 chr10 49596614 49596715 -95992573 + (TG)n Simple_repeat Simple_repeat 1 101 0 307 298 48 10 chr10 49597223 49597327 -95991961 - MIR3 SINE MIR -19 189 82 23 0 0 0 chr10 49598505 49598528 -95990760 + AT_rich Low_complexity Low_complexity 1 23 0 291 275 0 50 chr10 49599069 49599149 -95990139 + MIR SINE MIR 65 140 -122 404 250 60 0 chr10 49599201 49599301 -95989987 - MIR SINE MIR -2 260 155 348 267 59 0 chr10 49600248 49600349 -95988939 + MIR SINE MIR 83 189 -73 597 315 30 39 chr10 49601171 49601427 -95987861 + MIR SINE MIR 4 257 -5 347 274 69 82 chr10 49601509 49601827 -95987461 + L2 LINE L2 2988 3301 -12 326 281 26 26 chr10 49605510 49605624 -95983664 + L2 LINE L2 2944 3057 -215 364 248 75 37 chr10 49605717 49605885 -95983403 + MIR SINE MIR 5 132 -76 197 195 49 0 chr10 49605998 49606039 -95983249 + L2 LINE L2 3262 3304 -9 236 300 236 0 chr10 49607315 49607455 -95981833 + MIR SINE MIR 77 249 -13 588 259 51 10 chr10 49608203 49608532 -95980756 + MER87 LTR ERV1 168 541 0 648 202 67 10 chr10 49610002 49610110 -95979178 + MER5A DNA MER1_type 4 128 -61 2640 54 0 0 chr10 49610110 49610407 -95978881 - AluY SINE Alu -10 301 5 648 202 67 10 chr10 49610407 49610467 -95978821 + MER5A DNA MER1_type 128 183 -6 243 0 0 0 chr10 49611109 49611136 -95978152 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 470 269 45 15 chr10 49612726 49612860 -95976428 - MER91B DNA MER1_type 0 190 53 249 288 88 16 chr10 49613298 49613423 -95975865 - MIR SINE MIR -65 197 64 823 325 91 48 chr10 49615261 49615824 -95973464 + L1MC/D LINE L1 2614 3200 -2946 414 294 39 39 chr10 49616181 49616334 -95972954 + L1MC/D LINE L1 3851 4003 -2143 262 319 53 31 chr10 49616404 49616630 -95972658 + L1MC/D LINE L1 4901 5131 -1015 344 279 39 51 chr10 49616737 49617007 -95972281 + L1MC/D LINE L1 5282 5559 -562 221 255 0 0 chr10 49617136 49617187 -95972101 + (TATG)n Simple_repeat Simple_repeat 2 52 0 22 48 0 48 chr10 49617358 49617420 -95971868 + AT_rich Low_complexity Low_complexity 1 59 0 281 259 259 14 chr10 49619792 49619931 -95969357 + MIR SINE MIR 79 251 -11 2211 122 30 43 chr10 49620098 49620493 -95968795 + MLT1B LTR MaLR 1 390 0 286 264 28 28 chr10 49621617 49621689 -95967599 + MER91B DNA MER1_type 119 190 0 2100 257 86 6 chr10 49622691 49623356 -95965932 - L1ME1 LINE L1 0 6166 5449 197 154 51 0 chr10 49625799 49625838 -95963450 - L2 LINE L2 -1035 2279 2239 224 247 0 68 chr10 49626674 49626747 -95962541 + MIR SINE MIR 195 262 0 600 234 58 109 chr10 49626948 49627455 -95961833 + L2 LINE L2 2694 3201 -112 226 291 71 55 chr10 49627469 49627596 -95961692 - MIR SINE MIR -73 189 61 303 278 78 17 chr10 49627677 49627792 -95961496 + MER63 DNA MER1_type 6 753 -83 288 53 0 0 chr10 49628150 49628188 -95961100 + (GA)n Simple_repeat Simple_repeat 2 39 0 772 298 62 21 chr10 49628199 49628571 -95960717 + L1MC4a LINE L1 5496 5882 -1926 305 302 0 18 chr10 49629680 49629849 -95959439 + (CA)n Simple_repeat Simple_repeat 2 167 0 263 281 125 116 chr10 49629912 49630232 -95959056 + L2 LINE L2 2950 3272 0 590 318 6 6 chr10 49630322 49630498 -95958790 + MER5A DNA MER1_type 7 182 -7 189 0 0 0 chr10 49630929 49630950 -95958338 + (TC)n Simple_repeat Simple_repeat 2 22 0 321 68 0 0 chr10 49630952 49630996 -95958292 + (TAGA)n Simple_repeat Simple_repeat 4 47 0 268 229 10 0 chr10 49631338 49631408 -95957880 + MIR SINE MIR 79 151 -57 199 395 35 0 chr10 49631408 49631494 -95957794 - MIR3 SINE MIR -3 205 117 1909 184 47 21 chr10 49631558 49631944 -95957344 + MSTD LTR MaLR 1 396 0 1002 239 50 56 chr10 49632596 49632712 -95956576 + L1MC4a LINE L1 5535 5650 -471 2510 64 0 3 chr10 49632712 49633010 -95956278 + AluY SINE Alu 1 297 -14 1002 239 50 56 chr10 49633010 49633374 -95955914 + L1MC4a LINE L1 5650 6017 -104 296 197 0 14 chr10 49633500 49633571 -95955717 + CT-rich Low_complexity Low_complexity 1 70 0 571 321 174 41 chr10 49633574 49634298 -95954990 + L2 LINE L2 2461 3270 -2 889 273 158 50 chr10 49634978 49635319 -95953969 - LTR16A LTR ERVL -79 378 1 215 286 71 0 chr10 49635382 49635452 -95953836 + MIR SINE MIR 49 123 -139 860 170 66 28 chr10 49636837 49637019 -95952269 - MER5A DNA MER1_type 0 189 1 1369 216 48 41 chr10 49638237 49638649 -95950639 - MLT1C LTR MaLR -52 415 1 247 312 48 40 chr10 49638788 49638913 -95950375 - L2 LINE L2 -1 3312 3187 489 353 26 26 chr10 49639629 49639861 -95949427 + MIR SINE MIR 20 251 -11 239 308 148 47 chr10 49644089 49644258 -95945030 + L2 LINE L2 3081 3266 -6 2587 280 109 33 chr10 49647792 49648070 -95941218 - L2 LINE L2 -4 3309 3054 2266 97 3 3 chr10 49648070 49648360 -95940928 + AluSx SINE Alu 1 290 -22 2587 280 109 33 chr10 49648360 49649379 -95939909 - L2 LINE L2 -259 3054 1870 954 290 89 33 chr10 49649641 49650190 -95939098 - MLT1K LTR MaLR -8 580 1 2167 211 129 19 chr10 49653872 49654460 -95934828 - L1MD2 LINE L1 0 6359 5707 942 226 35 65 chr10 49654460 49654676 -95934612 - L1MDa LINE L1 -3984 2556 2356 2292 145 81 20 chr10 49654676 49655083 -95934205 - MSTB1 LTR MaLR 0 432 1 942 226 35 65 chr10 49655083 49655268 -95934020 - L1MDa LINE L1 -4184 2356 2167 456 326 52 19 chr10 49656508 49656778 -95932510 + L1ME LINE L1 5479 5757 -364 252 311 118 17 chr10 49657591 49657710 -95931578 - MIR SINE MIR -112 150 20 545 282 158 5 chr10 49660278 49660480 -95928808 + MIR SINE MIR 28 260 -2 229 167 24 0 chr10 49661525 49661567 -95927721 + L1ME1 LINE L1 287 329 -6211 221 83 28 0 chr10 49661611 49661647 -95927641 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 438 130 39 26 chr10 49662004 49662081 -95927207 - Tigger3(Golem) DNA MER2_type -41 2988 2911 351 0 0 0 chr10 49662117 49662156 -95927132 + (TG)n Simple_repeat Simple_repeat 2 40 0 1986 170 29 12 chr10 49662157 49662498 -95926790 + MER7A DNA MER2_type 1 345 -1 2394 249 65 20 chr10 49662569 49663934 -95925354 + L1ME1 LINE L1 1557 3006 -3534 828 168 20 152 chr10 49663934 49664184 -95925104 - MER20 DNA MER1_type -1 218 2 2394 249 65 20 chr10 49664184 49664364 -95924924 + L1ME1 LINE L1 3006 3176 -3364 765 261 109 17 chr10 49664363 49664711 -95924577 + L1ME1 LINE L1 3584 3963 -2577 * 1659 226 16 25 chr10 49664712 49665080 -95924208 - MLT1A1 LTR MaLR 0 365 1 1090 244 83 26 chr10 49665106 49665509 -95923779 + L1ME1 LINE L1 3986 4364 -2176 2208 29 0 26 chr10 49665509 49665782 -95923506 + L1PA4 LINE L1 5890 6155 0 1090 244 83 26 chr10 49665782 49667333 -95921955 + L1ME1 LINE L1 4364 5762 -778 1180 167 39 14 chr10 49667346 49667757 -95921531 + Tigger7 DNA MER2_type 1 500 -233 899 142 104 11 chr10 49667756 49667939 -95921349 + Tigger7 DNA MER2_type 2384 2583 -4 * 1050 249 71 15 chr10 49667944 49668321 -95920967 + L1ME1 LINE L1 6184 6534 -26 482 171 0 63 chr10 49668667 49668778 -95920510 + MER53 DNA DNA 4 107 -82 238 308 0 0 chr10 49669700 49669784 -95919504 + (TGGA)n Simple_repeat Simple_repeat 1 84 0 347 273 23 0 chr10 49671177 49671265 -95918023 - MIR SINE MIR -122 140 51 396 0 0 0 chr10 49673600 49673644 -95915644 + (TG)n Simple_repeat Simple_repeat 2 45 0 381 290 163 43 chr10 49674113 49674555 -95914733 - L2 LINE L2 0 3313 2819 730 307 47 47 chr10 49674764 49675126 -95914162 + L2 LINE L2 2129 2490 -824 194 300 89 62 chr10 49675112 49675369 -95913919 + L2 LINE L2 3046 3309 -4 * 462 257 67 55 chr10 49675853 49676106 -95913182 + L1ME4a LINE L1 5632 5887 -234 378 121 0 0 chr10 49676311 49676377 -95912911 + (CA)n Simple_repeat Simple_repeat 2 67 0 207 306 0 0 chr10 49677879 49677928 -95911360 + polypurine Low_complexity Low_complexity 2 50 0 200 330 59 34 chr10 49677962 49678080 -95911208 - L2 LINE L2 -168 3145 3025 959 178 0 0 chr10 49678214 49678371 -95910917 - AluJo SINE Alu -24 288 132 262 59 78 0 chr10 49678371 49678422 -95910866 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 291 128 0 0 chr10 49678430 49678469 -95910819 - AluJo SINE Alu -179 123 85 3540 38 0 2 chr10 49680927 49681353 -95907935 - L1P LINE L1 -1254 4892 4468 957 126 19 0 chr10 49681353 49681512 -95907776 - HSMAR2 DNA Mariner -1139 163 2 351 222 11 22 chr10 49682632 49682722 -95906566 + MIR SINE MIR 55 143 -119 192 154 51 0 chr10 49682756 49682795 -95906493 + MIR SINE MIR 222 262 0 427 216 176 24 chr10 49682845 49682970 -95906318 + MER5B DNA MER1_type 7 150 -28 387 293 14 14 chr10 49683977 49684124 -95905164 + C-rich Low_complexity Low_complexity 3 149 0 225 0 0 0 chr10 49684231 49684256 -95905032 + (GA)n Simple_repeat Simple_repeat 2 26 0 273 277 187 7 chr10 49684930 49685085 -95904203 - MIR SINE MIR -60 202 20 291 128 0 0 chr10 49685877 49685916 -95903372 + AluJo SINE Alu 85 123 -179 262 59 78 0 chr10 49685924 49685975 -95903313 + (TTTG)n Simple_repeat Simple_repeat 2 56 0 974 191 0 0 chr10 49685975 49686148 -95903140 + AluJo SINE Alu 132 304 -8 2404 160 55 2 chr10 49687072 49687527 -95901761 + L1MB3 LINE L1 5696 6174 -9 195 219 27 68 chr10 49687531 49687604 -95901684 + MIR SINE MIR 178 247 -15 227 301 58 58 chr10 49687606 49687762 -95901526 - MIR3 SINE MIR -9 199 44 309 279 142 58 chr10 49688778 49688968 -95900320 - MIR SINE MIR -6 256 51 364 184 15 4 chr10 49689968 49690096 -95899192 - MER53 DNA DNA 0 189 2 267 31 0 0 chr10 49690537 49690569 -95898719 + (TG)n Simple_repeat Simple_repeat 2 33 0 314 328 0 8 chr10 49690795 49690923 -95898365 - MER113 DNA MER1_type? -387 134 8 415 218 23 0 chr10 49690935 49691022 -95898266 + MIR SINE MIR 55 143 -119 192 154 51 0 chr10 49691056 49691095 -95898193 + MIR SINE MIR 222 262 0 454 218 177 16 chr10 49691145 49691269 -95898019 + MER5B DNA MER1_type 7 150 -28 1976 141 0 0 chr10 49692169 49692467 -95896821 - AluJo SINE Alu -14 298 1 415 306 114 37 chr10 49692525 49692822 -95896466 - MER102a DNA MER1_type -5 325 6 2141 95 3 10 chr10 49693666 49693962 -95895326 + AluSx SINE Alu 1 294 -18 210 71 0 0 chr10 49695166 49695194 -95894094 + (CA)n Simple_repeat Simple_repeat 1 28 0 2078 121 0 0 chr10 49695296 49695586 -95893702 + AluSq SINE Alu 1 290 -23 22 0 0 0 chr10 49695586 49695608 -95893680 + AT_rich Low_complexity Low_complexity 1 22 0 248 337 22 22 chr10 49696529 49696618 -95892670 - L1MC/D LINE L1 -2176 5632 5544 180 239 183 0 chr10 49697690 49697761 -95891527 - L3b LINE CR1 -136 1447 1364 22 56 0 0 chr10 49697823 49697859 -95891429 + AT_rich Low_complexity Low_complexity 1 36 0 219 314 37 23 chr10 49698060 49698157 -95891131 + MIR SINE MIR 19 115 -105 1814 98 98 0 chr10 49700372 49700636 -95888652 + AluSq SINE Alu 6 295 -18 301 50 0 133 chr10 49700703 49700763 -95888525 - AluSc SINE Alu 0 299 248 2092 114 10 0 chr10 49700913 49701203 -95888085 - AluSx SINE Alu -6 306 14 270 198 99 25 chr10 49701211 49701292 -95887996 + L1MC5 LINE L1 7843 7929 -32 479 81 0 0 chr10 49701299 49701361 -95887927 + Alu SINE Alu 2 63 -255 233 88 0 0 chr10 49701330 49701364 -95887924 + Alu SINE Alu 33 66 -237 * 25 0 0 0 chr10 49701704 49701729 -95887559 + AT_rich Low_complexity Low_complexity 1 25 0 227 241 0 0 chr10 49701793 49701847 -95887441 - L1ME LINE L1 -311 5810 5757 322 253 77 98 chr10 49701868 49702062 -95887226 - L1MC4 LINE L1 -5 8037 7848 1010 118 0 0 chr10 49702090 49702225 -95887063 + AluSq/x SINE Alu 2 136 -177 1806 235 45 12 chr10 49702225 49702710 -95886578 - L1ME LINE L1 -365 5799 5299 257 300 32 59 chr10 49702924 49703177 -95886111 + L1ME1 LINE L1 5512 5757 -364 475 231 19 38 chr10 49703788 49703948 -95885340 + MER106A DNA MER1_type 1 157 -79 29 28 0 0 chr10 49703969 49704005 -95885283 + AT_rich Low_complexity Low_complexity 1 36 0 21 36 0 0 chr10 49704068 49704096 -95885192 + AT_rich Low_complexity Low_complexity 1 28 0 373 194 37 15 chr10 49704280 49704414 -95884874 + Charlie7 DNA MER1_type 2440 2576 -36 196 50 0 75 chr10 49704615 49704655 -95884633 + (GAAAA)n Simple_repeat Simple_repeat 4 40 0 2415 94 3 0 chr10 49704754 49705062 -95884226 + AluY SINE Alu 1 309 -2 1822 152 17 13 chr10 49705092 49705394 -95883894 + AluJb SINE Alu 10 312 0 814 265 83 28 chr10 49705509 49705833 -95883455 + L1ME1 LINE L1 5816 6157 -9 2193 116 0 3 chr10 49706485 49706787 -95882501 - AluSq SINE Alu -12 301 1 915 181 0 30 chr10 49707084 49707250 -95882038 + AluJo SINE Alu 3 163 -149 607 107 0 0 chr10 49707308 49707392 -95881896 + AluSp/q SINE Alu 164 247 -66 1702 136 7 48 chr10 49707700 49708010 -95881278 + AluJb SINE Alu 1 297 -15 1005 158 0 0 chr10 49708010 49708187 -95881101 + (TA)n Simple_repeat Simple_repeat 1 177 0 21 0 0 0 chr10 49709286 49709307 -95879981 + AT_rich Low_complexity Low_complexity 1 21 0 26 34 0 51 chr10 49709377 49709436 -95879852 + AT_rich Low_complexity Low_complexity 1 56 0 268 304 74 52 chr10 49709605 49709740 -95879548 + MIR3 SINE MIR 6 143 -65 204 321 0 0 chr10 49710976 49711029 -95878259 + (CATATA)n Simple_repeat Simple_repeat 3 55 0 1998 149 19 11 chr10 49711064 49711728 -95877560 + MER50 LTR ERV1 1 710 -24 841 98 0 0 chr10 49711761 49711884 -95877404 - L1MB5 LINE L1 -229 5945 5823 256 272 49 12 chr10 49711980 49712061 -95877227 - L2 LINE L2 -211 3061 2978 3763 155 125 22 chr10 49712061 49712420 -95876868 + MER4D LTR ERV1 2 323 -580 1762 139 81 37 chr10 49712420 49712743 -95876545 + MER1B DNA MER1_type 1 337 0 3763 155 125 22 chr10 49712743 49713201 -95876087 + MER4D LTR ERV1 323 903 0 421 148 37 0 chr10 49713267 49713348 -95875940 + LTR39 LTR ERV1 1 84 -699 3831 52 14 0 chr10 49713348 49713849 -95875439 - LTR10D LTR ERV1 0 513 6 3691 176 22 10 chr10 49713855 49714549 -95874739 + LTR39 LTR ERV1 82 783 0 2170 101 0 0 chr10 49714574 49714851 -95874437 + AluSc SINE Alu 1 277 -32 915 59 0 0 chr10 49714851 49714969 -95874319 + (GAAA)n Simple_repeat Simple_repeat 3 120 0 448 322 76 23 chr10 49714970 49715234 -95874054 - L2 LINE L2 -1071 2243 1966 1600 156 53 43 chr10 49715235 49715537 -95873751 + AluJo SINE Alu 1 305 -7 2008 135 3 3 chr10 49715537 49715833 -95873455 + AluSx SINE Alu 1 296 -16 1357 183 144 8 chr10 49716096 49716353 -95872935 - AluJo SINE Alu -20 292 1 984 155 21 64 chr10 49717029 49717091 -95872197 - AluJo SINE Alu -125 187 124 2371 81 0 16 chr10 49717091 49717399 -95871889 - AluY SINE Alu -8 303 1 984 155 21 64 chr10 49717399 49717523 -95871765 - AluJo SINE Alu -188 124 9 1207 161 0 41 chr10 49717524 49717742 -95871546 - AluJo SINE Alu -102 210 2 3397 245 118 22 chr10 49717851 49718159 -95871129 - L1M4 LINE L1 -1051 5095 4818 1743 199 65 22 chr10 49718159 49718607 -95870681 - MLT1C LTR MaLR 0 467 1 3397 245 118 22 chr10 49718607 49718812 -95870476 - L1M4 LINE L1 -1328 4818 4634 2289 88 3 7 chr10 49718812 49719108 -95870180 - AluSq SINE Alu -18 295 1 3397 245 118 22 chr10 49719108 49719686 -95869602 - L1M4 LINE L1 -1512 4634 4113 2171 133 7 0 chr10 49719686 49719987 -95869301 - AluSx SINE Alu -9 303 1 3397 245 118 22 chr10 49719987 49720328 -95868960 - L1M4 LINE L1 -2033 4113 3523 186 191 128 0 chr10 49720764 49720811 -95868477 + L2 LINE L2 3006 3058 -214 210 289 62 72 chr10 49721074 49721128 -95868160 - MIR SINE MIR -80 128 74 1896 141 57 3 chr10 49721128 49721411 -95867877 + AluSx SINE Alu 1 298 -14 210 289 62 72 chr10 49721411 49721453 -95867835 - MIR SINE MIR -134 74 33 187 313 142 33 chr10 49721700 49721911 -95867377 + L2 LINE L2 2444 2677 -637 1846 155 0 21 chr10 49724523 49724814 -95864474 - AluJo SINE Alu -25 287 3 941 180 52 0 chr10 49725296 49725490 -95863798 + MER3 DNA MER1_type 6 209 0 208 305 19 48 chr10 49725968 49726073 -95863215 - L2 LINE L2 -14 3299 3198 1506 184 47 37 chr10 49726113 49726238 -95863050 + AluJo SINE Alu 3 125 -187 2205 89 21 7 chr10 49726238 49726529 -95862759 - AluSc SINE Alu -14 295 1 1506 184 47 37 chr10 49726529 49726702 -95862586 + AluJo SINE Alu 125 304 -8 208 342 26 26 chr10 49727015 49727129 -95862159 - L2 LINE L2 -170 3102 2989 213 325 113 71 chr10 49727189 49727656 -95861632 - L2 LINE L2 -456 2858 2372 1011 126 69 6 chr10 49727862 49728036 -95861252 + L1MC1 LINE L1 6141 6325 -8 2090 119 0 3 chr10 49728036 49728352 -95860936 + AluSx SINE Alu 1 315 0 209 222 16 0 chr10 49728797 49728860 -95860428 + CT-rich Low_complexity Low_complexity 1 64 0 311 192 0 55 chr10 49728945 49729018 -95860270 + MER103 DNA DNA 13 81 -85 897 133 7 22 chr10 49729550 49729685 -95859603 - AluSq/x SINE Alu -180 133 1 479 238 46 53 chr10 49729977 49730128 -95859160 + MIR SINE MIR 98 247 -15 23 33 0 0 chr10 49732663 49732693 -95856595 + AT_rich Low_complexity Low_complexity 1 30 0 22 35 0 0 chr10 49733392 49733421 -95855867 + AT_rich Low_complexity Low_complexity 1 29 0 2323 109 0 0 chr10 49734404 49734707 -95854581 + AluSx SINE Alu 1 303 -9 22 35 0 0 chr10 49734992 49735021 -95854267 + AT_rich Low_complexity Low_complexity 1 29 0 2132 142 0 7 chr10 49735421 49735731 -95853557 + AluSx SINE Alu 1 308 -4 2222 107 0 0 chr10 49735786 49736077 -95853211 + AluSc SINE Alu 1 291 -18 1514 160 4 19 chr10 49736086 49736349 -95852939 + AluJb SINE Alu 1 259 -53 2075 131 0 0 chr10 49737024 49737329 -95851959 + AluSx SINE Alu 1 305 0 2477 169 79 89 chr10 49737975 49738773 -95850515 + L1MD2 LINE L1 4615 5404 -747 2156 109 0 0 chr10 49739144 49739461 -95849827 - AluY SINE Alu 0 317 1 299 280 24 88 chr10 49739948 49740073 -95849215 + L2 LINE L2 3155 3271 -1 458 213 79 0 chr10 49740840 49740967 -95848321 + L1MDa LINE L1 40 176 -6364 5595 195 96 29 chr10 49740979 49742694 -95846594 + L1MDa LINE L1 805 2634 -3906 1374 208 96 123 chr10 49742735 49743287 -95846001 + L1MD2 LINE L1 5706 6242 0 953 122 0 51 chr10 49743295 49743451 -95845837 + FRAM SINE Alu 20 167 -9 26 50 0 0 chr10 49743581 49743621 -95845667 + AT_rich Low_complexity Low_complexity 1 40 0 551 239 116 38 chr10 49743687 49743980 -95845308 - HAL1 LINE L1 -234 2273 1958 324 321 80 43 chr10 49744251 49744413 -95844875 + MIR3 SINE MIR 16 183 -25 428 62 16 0 chr10 49745372 49745436 -95843852 + (GA)n Simple_repeat Simple_repeat 2 66 0 1178 138 0 0 chr10 49745756 49745916 -95843372 - AluSg/x SINE Alu -23 287 128 1644 132 25 4 chr10 49745923 49746166 -95843122 - AluSx SINE Alu -59 253 6 2129 183 128 35 chr10 49746219 49746669 -95842619 - MLT1F1 LTR MaLR -4 563 58 2113 125 0 10 chr10 49746669 49746974 -95842314 - AluSq SINE Alu -7 306 5 2129 183 128 35 chr10 49746974 49747038 -95842250 - MLT1F1 LTR MaLR -509 58 1 3172 142 116 24 chr10 49749119 49749909 -95839379 - MER4D LTR ERV1 0 832 1 21 0 0 0 chr10 49750272 49750293 -95838995 + AT_rich Low_complexity Low_complexity 1 21 0 497 306 70 21 chr10 49750907 49751093 -95838195 - MIR SINE MIR -48 214 20 2278 109 0 7 chr10 49751855 49752159 -95837129 - AluSx SINE Alu -10 302 1 3622 215 84 7 chr10 49752161 49753074 -95836214 - L1MC4a LINE L1 -179 7629 6646 23 0 0 0 chr10 49753541 49753564 -95835724 + AT_rich Low_complexity Low_complexity 1 23 0 764 185 0 0 chr10 49754040 49754159 -95835129 - FLAM_A SINE Alu -14 119 1 642 292 88 37 chr10 49754159 49754708 -95834580 - L2 LINE L2 -242 3030 2447 248 264 0 0 chr10 49754829 49754882 -95834406 + L2 LINE L2 3219 3271 -1 297 333 88 18 chr10 49754887 49755001 -95834287 - MIR SINE MIR -66 142 21 2349 91 0 0 chr10 49755614 49755922 -95833366 - AluY SINE Alu -3 308 1 28 0 0 0 chr10 49755922 49755950 -95833338 + AT_rich Low_complexity Low_complexity 1 28 0 480 271 35 79 chr10 49756245 49756448 -95832840 - MIR SINE MIR -68 194 1 244 305 19 0 chr10 49758216 49758321 -95830967 + CT-rich Low_complexity Low_complexity 2 108 0 1384 189 73 30 chr10 49760047 49760417 -95828871 - MLT1B LTR MaLR -2 388 3 427 309 8 0 chr10 49761615 49761738 -95827550 + MIR SINE MIR 79 202 -60 2155 102 0 7 chr10 49762210 49762505 -95826783 + AluSg1 SINE Alu 1 293 -16 349 143 24 71 chr10 49763010 49763094 -95826194 - HsTC2 DNA Tc2 0 1898 1819 421 287 72 49 chr10 49763143 49763408 -95825880 + L1MEd LINE L1 367 637 -5482 334 253 40 20 chr10 49763409 49763508 -95825780 - HsTC2 DNA Tc2 -1794 104 4 22 0 0 0 chr10 49764350 49764372 -95824916 + AT_rich Low_complexity Low_complexity 1 22 0 396 0 0 0 chr10 49765013 49765057 -95824231 + (TG)n Simple_repeat Simple_repeat 2 45 0 229 337 79 0 chr10 49765240 49765329 -95823959 - L3 LINE CR1 -70 1507 1412 217 300 119 38 chr10 49765463 49765623 -95823665 - L3 LINE CR1 -100 1477 1305 465 319 84 57 chr10 49766557 49766962 -95822326 - L3 LINE CR1 -119 1458 1043 597 236 169 10 chr10 49767923 49768118 -95821170 + MIR SINE MIR 3 228 -34 234 0 0 0 chr10 49768584 49768610 -95820678 + (CA)n Simple_repeat Simple_repeat 2 27 0 203 382 42 37 chr10 49771222 49771413 -95817875 + L2 LINE L2 2553 2744 -570 293 327 164 0 chr10 49771734 49771844 -95817444 + L2 LINE L2 3137 3264 -8 360 0 0 0 chr10 49772336 49772376 -95816912 + (TG)n Simple_repeat Simple_repeat 1 40 0 2531 65 3 0 chr10 49773674 49773980 -95815308 - AluSp SINE Alu -5 308 2 4613 153 45 31 chr10 49774263 49775157 -95814131 - L1MC2 LINE L1 -109 6235 5326 2270 118 0 0 chr10 49775157 49775453 -95813835 - AluSg SINE Alu -14 296 1 4613 153 45 31 chr10 49775453 49775523 -95813765 - L1MC2 LINE L1 -1018 5326 5258 1840 162 10 3 chr10 49775527 49775835 -95813453 - AluSx SINE Alu -2 310 1 1242 138 0 0 chr10 49775850 49776024 -95813264 - AluJb SINE Alu -137 175 2 622 231 24 42 chr10 49776046 49776258 -95813030 - L1MC2 LINE L1 -1015 5131 4924 1715 114 4 0 chr10 49776287 49776523 -95812765 + AluSq SINE Alu 1 237 -76 522 220 38 0 chr10 49776536 49776668 -95812620 - L1MC2 LINE L1 -1446 4700 4564 2394 70 7 10 chr10 49777114 49777415 -95811873 + AluY SINE Alu 1 300 -11 2198 119 0 3 chr10 49777585 49777896 -95811392 + AluY SINE Alu 1 310 -1 183 80 0 0 chr10 49778644 49778669 -95810619 + (T)n Simple_repeat Simple_repeat 1 25 0 257 274 91 62 chr10 49780034 49780220 -95809068 - MIR SINE MIR -56 206 17 1601 189 13 17 chr10 49780418 49780720 -95808568 - AluJo SINE Alu -11 301 1 254 196 0 0 chr10 49780728 49780774 -95808514 - L2 LINE L2 -90 3182 3137 451 151 28 19 chr10 49780779 49780885 -95808403 - L1MA10 LINE L1 -1 6333 6227 400 173 232 0 chr10 49780896 49781064 -95808224 - L1M4 LINE L1 -826 5320 5114 975 226 114 40 chr10 49781065 49781246 -95808042 - L1M4 LINE L1 -1378 4768 4602 2033 61 4 0 chr10 49781246 49781491 -95807797 - AluSp SINE Alu -21 292 47 975 226 114 40 chr10 49781491 49781730 -95807558 - L1M4 LINE L1 -1544 4602 4317 2255 102 0 0 chr10 49782087 49782382 -95806906 - AluSc SINE Alu -14 295 1 367 167 0 0 chr10 49782415 49782475 -95806813 - L1MC4 LINE L1 -15 8027 7968 3764 203 111 52 chr10 49782475 49783658 -95805630 - L1MC4 LINE L1 -19 8023 6771 258 81 0 0 chr10 49783673 49783710 -95805578 + (CA)n Simple_repeat Simple_repeat 2 38 0 895 266 16 4 chr10 49783710 49783954 -95805334 - L1MC4a LINE L1 -1217 6591 6345 1193 272 45 31 chr10 49783958 49784381 -95804907 - L1ME2 LINE L1 -10 6154 5726 1087 220 40 87 chr10 49784403 49784540 -95804748 + MLT2C1 LTR ERVL 13 155 -242 2083 142 0 0 chr10 49784540 49784836 -95804452 - AluSx SINE Alu -16 296 1 1087 220 40 87 chr10 49784836 49785102 -95804186 + MLT2C1 LTR ERVL 155 397 0 1701 203 32 36 chr10 49785105 49785661 -95803627 - L1ME2 LINE L1 -442 5722 5175 668 132 0 0 chr10 49785674 49785780 -95803508 - AluSg/x SINE Alu -3 306 201 2366 94 0 19 chr10 49785792 49786110 -95803178 - AluSx SINE Alu 0 312 1 761 211 78 56 chr10 49786126 49786279 -95803009 - L1ME2 LINE L1 -1714 4432 4284 1848 124 56 0 chr10 49786279 49786573 -95802715 - AluSx SINE Alu 0 309 1 761 211 78 56 chr10 49786573 49786740 -95802548 - L1ME2 LINE L1 -1862 4284 4104 207 0 0 0 chr10 49787470 49787493 -95801795 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 2460 92 0 3 chr10 49789167 49789481 -95799807 - AluSq SINE Alu 0 313 1 24 0 0 0 chr10 49789787 49789811 -95799477 + AT_rich Low_complexity Low_complexity 1 24 0 1748 134 22 47 chr10 49790024 49790344 -95798944 - AluJb SINE Alu 0 312 1 2039 138 3 0 chr10 49791100 49791396 -95797892 - AluSx SINE Alu -15 297 1 435 314 36 54 chr10 49791767 49791990 -95797298 - MIR SINE MIR -12 250 32 2428 81 3 3 chr10 49791992 49792302 -95796986 - AluSp SINE Alu -3 310 1 218 231 0 19 chr10 49792624 49792676 -95796612 + L2 LINE L2 3251 3301 -12 189 0 0 0 chr10 49793032 49793053 -95796235 + (TG)n Simple_repeat Simple_repeat 2 22 0 743 106 121 8 chr10 49794013 49794145 -95795143 + AluSp/q SINE Alu 161 307 -6 1338 212 119 3 chr10 49794332 49794643 -95794645 - MER7A DNA MER2_type -1 345 1 699 163 5 7 chr10 49795629 49795832 -95793456 - AluJb SINE Alu -46 266 15 255 292 200 8 chr10 49796928 49797048 -95792240 - L3 LINE CR1 -5 1572 1430 380 260 87 16 chr10 49797994 49798121 -95791167 - L2 LINE L2 0 3272 3137 907 248 113 68 chr10 49798416 49799000 -95790288 - MER21B LTR ERV1 -124 739 40 23 68 0 0 chr10 49799185 49799229 -95790059 + AT_rich Low_complexity Low_complexity 1 44 0 449 255 141 35 chr10 49799438 49799693 -95789595 - L1ME LINE L1 -297 5824 5543 226 232 123 39 chr10 49799740 49799895 -95789393 - L1ME LINE L1 -2386 5422 5255 281 264 23 0 chr10 49800529 49800616 -95788672 + L1ME LINE L1 5769 5857 -264 324 175 13 26 chr10 49800801 49800893 -95788395 - AluSg SINE Alu -170 130 45 632 213 74 0 chr10 49801056 49801178 -95788110 + FLAM_A SINE Alu 1 131 -2 2201 104 3 3 chr10 49801199 49801497 -95787791 - AluSg SINE Alu -12 298 1 1029 151 0 13 chr10 49801565 49801724 -95787564 - FRAM SINE Alu -19 157 1 1616 229 89 29 chr10 49801866 49802337 -95786951 - L1MCc LINE L1 -5881 542 50 273 29 0 0 chr10 49802329 49802363 -95786925 + (T)n Simple_repeat Simple_repeat 1 34 0 * 403 259 80 31 chr10 49802488 49802650 -95786638 - L1M4 LINE L1 -3302 2844 2675 1136 117 101 0 chr10 49802824 49802858 -95786430 - MER107 DNA MER1_type 0 197 168 195 42 0 0 chr10 49802858 49802882 -95786406 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1136 117 101 0 chr10 49802882 49803026 -95786262 - MER107 DNA MER1_type -29 168 1 501 319 78 42 chr10 49803353 49803739 -95785549 - MLT1K LTR MaLR 0 588 189 195 349 0 15 chr10 49804235 49804301 -95784987 + L2 LINE L2 3225 3289 -24 1206 121 76 18 chr10 49804330 49804553 -95784735 + MER46A DNA MER2_type 1 236 0 270 266 119 28 chr10 49804694 49804803 -95784485 - MIR SINE MIR -110 152 34 557 245 117 21 chr10 49804853 49805041 -95784247 - MIR SINE MIR -10 252 47 204 328 118 31 chr10 49805090 49805319 -95783969 - L2 LINE L2 -1057 2257 2009 690 319 79 0 chr10 49805556 49805772 -95783516 + MIR SINE MIR 13 245 -17 478 266 84 21 chr10 49806336 49806479 -95782809 - MIR3 SINE MIR -27 181 30 26 74 0 0 chr10 49806580 49806634 -95782654 + AT_rich Low_complexity Low_complexity 1 54 0 34 55 0 0 chr10 49807139 49807194 -95782094 + AT_rich Low_complexity Low_complexity 1 55 0 1685 262 146 22 chr10 49807218 49807951 -95781337 - L1MC4 LINE L1 -124 7918 7095 2069 248 27 58 chr10 49807978 49808196 -95781092 - L1MC4a LINE L1 -977 6831 6608 264 100 0 0 chr10 49808196 49808236 -95781052 + (CA)n Simple_repeat Simple_repeat 1 40 0 2069 248 27 58 chr10 49808236 49808770 -95780518 - L1MC4a LINE L1 -1200 6608 6103 2197 115 0 0 chr10 49808773 49809085 -95780203 + AluSx SINE Alu 1 312 0 731 88 0 0 chr10 49809105 49809207 -95780081 + AluSp/q SINE Alu 208 309 -4 7500 120 24 31 chr10 49809214 49810215 -95779073 + MER4B-int LTR ERV1 2619 3626 -3132 1861 151 146 13 chr10 49810215 49810593 -95778695 - MSTA LTR MaLR 0 428 1 7500 120 24 31 chr10 49810593 49810613 -95778675 + MER4B-int LTR ERV1 3626 3645 -3113 2039 134 0 0 chr10 49810613 49810919 -95778369 - AluSx SINE Alu -6 306 1 7500 120 24 31 chr10 49810919 49811111 -95778177 + MER4B-int LTR ERV1 3645 3824 -2934 619 70 23 12 chr10 49811111 49811197 -95778091 + MER4E LTR ERV1 678 764 -2 293 224 3 58 chr10 49811206 49811322 -95777966 + L1ME3A LINE L1 5856 5968 -196 225 196 0 0 chr10 49811603 49811654 -95777634 + GA-rich Low_complexity Low_complexity 3 53 0 814 224 94 1 chr10 49811656 49811899 -95777389 - L1MB7 LINE L1 -1 6183 5899 1842 137 102 14 chr10 49811902 49812423 -95776865 - MER4A LTR ERV1 0 664 1 2964 168 36 61 chr10 49812423 49812662 -95776626 - L1MB7 LINE L1 -282 5902 5658 2135 96 0 0 chr10 49812662 49812973 -95776315 - AluY SINE Alu 0 311 1 2100 112 0 3 chr10 49812975 49813271 -95776017 - AluSx SINE Alu -17 295 1 2964 168 36 61 chr10 49813271 49813571 -95775717 - L1MB7 LINE L1 -527 5657 5351 1772 126 0 81 chr10 49813571 49813905 -95775383 - AluSp SINE Alu -6 307 1 2964 168 36 61 chr10 49813905 49814069 -95775219 - L1MB7 LINE L1 -833 5351 5184 1653 173 0 40 chr10 49814069 49814349 -95774939 - AluJo SINE Alu 0 312 68 2216 84 3 10 chr10 49814349 49814657 -95774631 - AluSp SINE Alu -7 306 1 1653 173 0 40 chr10 49814657 49814723 -95774565 - AluJo SINE Alu -244 68 1 2964 168 36 61 chr10 49814723 49814935 -95774353 - L1MB7 LINE L1 -1000 5184 5007 1291 212 42 3 chr10 49814935 49815218 -95774070 - AluJb SINE Alu -14 298 5 2964 168 36 61 chr10 49815218 49815324 -95773964 - L1MB7 LINE L1 -1177 5007 4900 26 30 0 0 chr10 49816128 49816161 -95773127 + AT_rich Low_complexity Low_complexity 1 33 0 23 0 0 0 chr10 49816173 49816196 -95773092 + AT_rich Low_complexity Low_complexity 1 23 0 388 321 83 5 chr10 49816369 49816562 -95772726 + MIR SINE MIR 40 247 -15 413 290 25 62 chr10 49817630 49817792 -95771496 + L2 LINE L2 2949 3104 -168 293 264 47 38 chr10 49817812 49817918 -95771370 - MER5A DNA MER1_type -74 115 9 364 191 22 0 chr10 49818124 49818213 -95771075 + CT-rich Low_complexity Low_complexity 1 91 0 1835 155 3 3 chr10 49818213 49818510 -95770778 - AluJo SINE Alu -6 306 10 366 250 62 56 chr10 49819163 49819323 -95769965 - MIR3 SINE MIR -12 196 36 2361 118 151 0 chr10 49819505 49819877 -95769411 - LTR12 LTR ERV1 -234 480 53 274 231 0 0 chr10 49819877 49819929 -95769359 - LTR30 LTR ERV1 -670 52 1 232 359 113 38 chr10 49819939 49820098 -95769190 + L2 LINE L2 3015 3185 -87 379 217 19 0 chr10 49821501 49821607 -95767681 + GA-rich Low_complexity Low_complexity 1 108 0 1292 191 119 4 chr10 49822306 49822584 -95766704 - L1MC1 LINE L1 -5 6328 6019 2293 72 3 0 chr10 49822593 49822886 -95766402 - AluSx SINE Alu -18 294 1 1964 243 88 2 chr10 49823080 49823611 -95765677 + L1ME3 LINE L1 5562 6138 -24 294 51 0 0 chr10 49823611 49823650 -95765638 - MADE1 DNA Mariner -41 39 1 623 230 97 41 chr10 49823752 49823948 -95765340 + MIR SINE MIR 52 258 -4 693 268 80 18 chr10 49823950 49824226 -95765062 - L1ME4a LINE L1 -247 5874 5582 699 209 16 0 chr10 49825205 49825334 -95763954 - FLAM_A SINE Alu -1 132 2 5256 120 30 34 chr10 49825364 49826256 -95763032 - L1PA16 LINE L1 -1 6165 5277 589 219 192 0 chr10 49826408 49826559 -95762729 - MER5A DNA MER1_type 0 189 10 24 85 0 0 chr10 49827685 49827744 -95761544 + AT_rich Low_complexity Low_complexity 1 59 0 2185 90 23 8 chr10 49828559 49828952 -95760336 + LTR7 LTR ERV1 1 443 -7 323 284 91 30 chr10 49830627 49830891 -95758397 + L1ME4a LINE L1 5842 6121 0 1893 138 34 0 chr10 49830920 49831218 -95758070 + AluJb SINE Alu 1 308 -4 344 253 20 14 chr10 49831745 49831891 -95757397 + CT-rich Low_complexity Low_complexity 2 148 0 828 113 16 0 chr10 49831891 49832015 -95757273 - AluSq SINE Alu -53 260 135 2100 110 7 0 chr10 49832015 49832315 -95756973 - AluSx SINE Alu -10 302 1 620 179 43 14 chr10 49833959 49834099 -95755189 + L1MB7 LINE L1 6029 6172 -12 4518 176 31 13 chr10 49834099 49835328 -95753960 + L1MD1 LINE L1 4819 6074 -168 1191 144 4 70 chr10 49835328 49835450 -95753838 - Tigger7 DNA MER2_type -1 2586 2486 2150 125 0 3 chr10 49835450 49835763 -95753525 - AluSx SINE Alu 0 312 1 1191 144 4 70 chr10 49835763 49835883 -95753405 - Tigger7 DNA MER2_type -101 2486 2360 323 272 49 85 chr10 49835883 49836119 -95753169 + L1ME4a LINE L1 5176 5396 -725 2087 128 0 0 chr10 49836119 49836408 -95752880 + AluSx SINE Alu 1 289 -23 323 272 49 85 chr10 49836408 49836631 -95752657 + L1ME4a LINE L1 5396 5625 -496 2045 124 7 0 chr10 49836655 49836962 -95752326 + AluSg SINE Alu 1 309 -1 403 302 50 92 chr10 49837007 49837441 -95751847 + L1ME4a LINE L1 5666 6087 -34 378 0 0 0 chr10 49837470 49837512 -95751776 + (CA)n Simple_repeat Simple_repeat 2 43 0 224 339 120 22 chr10 49837808 49837991 -95751297 + L2 LINE L2 2372 2572 -742 245 238 79 16 chr10 49838283 49838346 -95750942 - L2 LINE L2 -2 3270 3204 470 267 0 0 chr10 49838565 49838670 -95750618 - L2 LINE L2 -629 2685 2581 299 268 27 45 chr10 49839002 49839114 -95750174 - MIR SINE MIR -30 232 123 25 51 0 0 chr10 49839454 49839493 -95749795 + GC_rich Low_complexity Low_complexity 1 39 0 209 154 77 39 chr10 49839921 49839973 -95749315 - MIR SINE MIR -69 139 86 454 242 141 27 chr10 49840941 49841090 -95748198 + MIR SINE MIR 62 227 -35 192 324 14 0 chr10 49841267 49841341 -95747947 - MIR SINE MIR -164 98 24 217 204 0 0 chr10 49843406 49843458 -95745830 + MIR SINE MIR 73 125 -83 1286 306 43 3 chr10 49843923 49844315 -95744973 - L1MC4a LINE L1 -1882 5926 5519 468 324 70 18 chr10 49844357 49844629 -95744659 - L1MC4a LINE L1 -1845 5963 5678 198 248 159 18 chr10 49845006 49845119 -95744169 + L2 LINE L2 3012 3140 -173 202 255 39 0 chr10 49845300 49845351 -95743937 + L2 LINE L2 3217 3269 -3 2586 236 83 37 chr10 49846217 49846449 -95742839 - L1MC5 LINE L1 -125 7836 7616 1983 135 3 0 chr10 49846449 49846746 -95742542 - AluSx SINE Alu -14 298 1 2586 236 83 37 chr10 49846746 49847570 -95741718 - L1MC5 LINE L1 -345 7616 6743 281 185 0 19 chr10 49847561 49847615 -95741673 - L1MC4 LINE L1 -1287 6755 6703 * 2114 125 3 0 chr10 49847798 49848101 -95741187 - AluSx SINE Alu -8 304 1 603 303 117 22 chr10 49848279 49848741 -95740547 - L1MC4a LINE L1 -1630 6178 5673 209 229 42 0 chr10 49850671 49850719 -95738569 + C-rich Low_complexity Low_complexity 1 50 0 330 299 52 0 chr10 49852180 49852277 -95737011 - MIR3 SINE MIR -25 183 82 2194 102 0 3 chr10 49852482 49852785 -95736503 - AluSp SINE Alu -11 302 1 405 0 0 0 chr10 49852925 49852970 -95736318 + (TG)n Simple_repeat Simple_repeat 1 45 0 200 255 0 0 chr10 49853033 49853080 -95736208 + MIR SINE MIR 103 149 -113 530 305 61 15 chr10 49853646 49853971 -95735317 - L1MC4a LINE L1 -747 5399 5200 267 284 82 38 chr10 49855305 49855500 -95733788 - MIR SINE MIR -38 224 28 226 109 87 0 chr10 49859133 49859225 -95730063 + (TG)n Simple_repeat Simple_repeat 1 100 0 600 116 58 23 chr10 49859249 49860145 -95729143 + (TG)n Simple_repeat Simple_repeat 1 927 0 296 288 0 71 chr10 49860325 49860509 -95728779 + C-rich Low_complexity Low_complexity 2 172 0 2506 92 0 3 chr10 49862244 49862558 -95726730 - AluSq SINE Alu 0 313 1 24 0 0 0 chr10 49862864 49862888 -95726400 + AT_rich Low_complexity Low_complexity 1 24 0 1768 133 22 48 chr10 49863101 49863417 -95725871 - AluJb SINE Alu 0 312 5 2067 138 3 0 chr10 49864178 49864474 -95724814 - AluSx SINE Alu -15 297 1 374 314 36 54 chr10 49864845 49865068 -95724220 - MIR SINE MIR -12 250 32 2288 104 10 0 chr10 49865070 49865377 -95723911 - AluSq SINE Alu -3 310 1 2441 70 7 10 chr10 49865547 49865848 -95723440 - AluY SINE Alu -11 300 1 6971 200 61 24 chr10 49866426 49868071 -95721217 + L1M4 LINE L1 5 1709 -4833 2310 105 0 0 chr10 49868699 49868993 -95720295 - AluSx SINE Alu -18 294 1 201 83 0 62 chr10 49869401 49869449 -95719839 + (GGGGA)n Simple_repeat Simple_repeat 2 46 0 276 255 47 38 chr10 49869652 49869758 -95719530 + MER5A DNA MER1_type 9 115 -74 366 290 25 62 chr10 49869778 49869940 -95719348 - L2 LINE L2 -168 3104 2949 303 306 88 10 chr10 49871008 49871201 -95718087 - MIR SINE MIR -15 247 40 23 0 0 0 chr10 49871377 49871400 -95717888 + AT_rich Low_complexity Low_complexity 1 23 0 26 30 0 0 chr10 49871412 49871445 -95717843 + AT_rich Low_complexity Low_complexity 1 33 0 2983 169 36 61 chr10 49872249 49872355 -95716933 + L1MB7 LINE L1 4900 5007 -1177 1346 226 24 3 chr10 49872355 49872643 -95716645 + AluJb SINE Alu 5 298 -14 2983 169 36 61 chr10 49872643 49872855 -95716433 + L1MB7 LINE L1 5007 5223 -961 1763 173 0 40 chr10 49872855 49872921 -95716367 + AluJo SINE Alu 1 68 -244 2344 84 3 10 chr10 49872921 49873229 -95716059 + AluSp SINE Alu 1 306 -7 1763 173 0 40 chr10 49873229 49873509 -95715779 + AluJo SINE Alu 68 312 0 2983 169 36 61 chr10 49873509 49873673 -95715615 + L1MB7 LINE L1 5223 5390 -794 1328 166 21 98 chr10 49873673 49874011 -95715277 + AluYb8 SINE Alu 1 312 -6 2983 169 36 61 chr10 49874011 49874311 -95714977 + L1MB7 LINE L1 5390 5696 -488 2228 112 0 3 chr10 49874311 49874607 -95714681 + AluSx SINE Alu 1 295 -17 2276 92 0 0 chr10 49874609 49874920 -95714368 + AluY SINE Alu 1 311 0 2983 169 36 61 chr10 49874920 49875159 -95714129 + L1MB7 LINE L1 5697 5902 -282 1837 138 29 23 chr10 49875159 49875680 -95713608 + MER4A LTR ERV1 1 664 0 823 219 97 4 chr10 49875683 49875926 -95713362 + L1MB7 LINE L1 5899 6183 -1 225 196 0 0 chr10 49875928 49875979 -95713309 + CT-rich Low_complexity Low_complexity 3 53 0 297 205 12 67 chr10 49876260 49876376 -95712912 - L1ME3A LINE L1 -196 5968 5856 619 70 23 12 chr10 49876385 49876471 -95712817 - MER4E LTR ERV1 -2 764 678 7523 120 24 34 chr10 49876471 49876663 -95712625 - MER4B-int LTR ERV1 -2934 3824 3632 2159 132 0 0 chr10 49876663 49876966 -95712322 + AluSx SINE Alu 1 303 -9 7523 120 24 34 chr10 49876966 49876989 -95712299 - MER4B-int LTR ERV1 -3126 3632 3610 1860 151 146 13 chr10 49876989 49877367 -95711921 + MSTA LTR MaLR 1 428 0 7523 120 24 34 chr10 49877367 49878368 -95710920 - MER4B-int LTR ERV1 -3148 3610 2619 1381 131 189 12 chr10 49878375 49878500 -95710788 - AluSg1 SINE Alu -4 305 204 2288 91 10 7 chr10 49878500 49878807 -95710481 - AluSx SINE Alu -3 309 2 1381 131 189 12 chr10 49878807 49878940 -95710348 - AluSg1 SINE Alu -105 204 1 2834 123 48 57 chr10 49878940 49879311 -95709977 - MER4B-int LTR ERV1 -4800 1958 1585 1902 147 3 38 chr10 49879311 49879625 -95709663 + AluSx SINE Alu 1 303 -9 2834 123 48 57 chr10 49879625 49880054 -95709234 - MER4B-int LTR ERV1 -5173 1585 786 1434 129 4 57 chr10 49880143 49880406 -95708882 + AluJb SINE Alu 61 309 -3 6265 133 13 59 chr10 49880410 49880671 -95708617 - MER4B-int LTR ERV1 -5682 1076 805 1976 143 19 3 chr10 49880671 49880978 -95708310 - AluJb SINE Alu 0 312 1 6265 133 13 59 chr10 49880978 49881842 -95707446 - MER4B-int LTR ERV1 -5953 805 2 2676 134 99 39 chr10 49881843 49882099 -95707189 - MER4B LTR ERV1 0 779 540 2015 103 0 63 chr10 49882099 49882428 -95706860 + AluSx SINE Alu 3 312 0 2676 134 99 39 chr10 49882428 49882647 -95706641 - MER4B LTR ERV1 -239 540 336 1690 184 13 7 chr10 49882647 49882951 -95706337 - AluJb SINE Alu -4 308 3 2676 134 99 39 chr10 49882951 49883048 -95706240 - MER4B LTR ERV1 -443 336 3 2432 70 3 3 chr10 49883083 49883384 -95705904 - AluY SINE Alu -9 302 2 1689 204 39 23 chr10 49883390 49883830 -95705458 + L1ME1 LINE L1 4851 5297 -849 1776 176 0 0 chr10 49883862 49884166 -95705122 + AluJb SINE Alu 1 304 0 2155 212 65 40 chr10 49884173 49884743 -95704545 + L1ME1 LINE L1 5469 6052 -114 2248 97 27 3 chr10 49885110 49885410 -95703878 - AluSg SINE Alu -3 307 1 1543 193 71 51 chr10 49885668 49886120 -95703168 - L1ME2 LINE L1 -2 6162 5702 379 228 65 0 chr10 49886112 49886204 -95703084 - L1ME2 LINE L1 -2120 4026 3929 * 990 194 22 78 chr10 49886371 49886639 -95702649 - L1MB8 LINE L1 -41 6137 5885 1162 136 6 0 chr10 49886639 49886815 -95702473 - AluJb SINE Alu -17 295 119 3148 182 30 3 chr10 49886821 49887630 -95701658 - L1MB8 LINE L1 -311 5867 5039 3118 138 5 30 chr10 49887671 49888230 -95701058 - L1MB3 LINE L1 -19 6164 5620 1950 124 50 0 chr10 49888253 49888535 -95700753 + AluSp SINE Alu 1 296 -17 1009 253 132 35 chr10 49888567 49888890 -95700398 - L1MB8 LINE L1 -1073 5073 4698 2362 107 3 0 chr10 49888890 49889199 -95700089 - AluSx SINE Alu -2 310 1 1009 253 132 35 chr10 49889199 49889298 -95699990 - L1MB8 LINE L1 -1448 4698 4610 1651 100 60 12 chr10 49889305 49889555 -95699733 + AluSx SINE Alu 21 282 -30 291 178 0 0 chr10 49889777 49889822 -95699466 - Alu SINE Alu -20 282 238 2138 85 20 30 chr10 49890256 49890561 -95698727 - AluSx SINE Alu -10 302 1 431 234 32 90 chr10 49894035 49894116 -95695172 + MER104 DNA MER2_type 4 88 -1810 2437 99 3 0 chr10 49894116 49894428 -95694860 + AluSq SINE Alu 1 313 0 431 234 32 90 chr10 49894428 49894534 -95694754 + MER104 DNA MER2_type 88 180 0 238 358 41 16 chr10 49894539 49894662 -95694626 - L2 LINE L2 -25 3247 3122 451 236 132 16 chr10 49894728 49894910 -95694378 - L1MC5 LINE L1 -53 7908 7706 1350 216 34 34 chr10 49894952 49895280 -95694008 + L1MC1 LINE L1 18 345 -6195 409 183 12 0 chr10 49895289 49895371 -95693917 + L1MC1 LINE L1 1928 2010 -4530 180 0 0 0 chr10 49895371 49895391 -95693897 + (TTTTTG)n Simple_repeat Simple_repeat 2 21 0 6436 195 67 57 chr10 49895944 49896489 -95692799 + L1MC1 LINE L1 1994 2532 -4195 2002 134 14 0 chr10 49896489 49896772 -95692516 + AluSc SINE Alu 1 287 -22 6436 195 67 57 chr10 49896772 49897797 -95691491 + L1MC1 LINE L1 2532 3545 -3182 1786 181 3 3 chr10 49897797 49898096 -95691192 - AluSx SINE Alu -13 299 1 6436 195 67 57 chr10 49898096 49899091 -95690197 + L1MC1 LINE L1 3545 4528 -2199 2665 62 0 0 chr10 49899091 49899400 -95689888 + AluY SINE Alu 1 309 -2 6436 195 67 57 chr10 49899400 49899858 -95689430 + L1MC1 LINE L1 4528 4980 -1747 2344 103 3 0 chr10 49899858 49900160 -95689128 + AluSp SINE Alu 1 303 -10 6436 195 67 57 chr10 49900160 49900702 -95688586 + L1MC1 LINE L1 4980 6727 0 3618 244 55 23 chr10 49900703 49901990 -95687298 + L1M4 LINE L1 2111 3438 -2708 2725 113 13 42 chr10 49901996 49902153 -95687135 - L1MC1 LINE L1 -298 6035 5875 2254 121 3 0 chr10 49902153 49902459 -95686829 - AluSx SINE Alu -5 307 1 2725 113 13 42 chr10 49902459 49902759 -95686529 - L1MC1 LINE L1 -458 5875 5591 1973 225 100 41 chr10 49902766 49903106 -95686182 + L1M4 LINE L1 3452 3770 -2376 1292 183 99 35 chr10 49903106 49903390 -95685898 - AluJo SINE Alu -10 302 1 1973 225 100 41 chr10 49903390 49903806 -95685482 + L1M4 LINE L1 3770 4253 -1893 287 212 66 95 chr10 49904195 49904332 -95684956 - L3 LINE CR1 -680 897 765 644 212 139 18 chr10 49906391 49906590 -95682698 - MIR SINE MIR -19 243 21 330 346 84 0 chr10 49907117 49907296 -95681992 + MIR SINE MIR 69 262 0 187 330 24 13 chr10 49910027 49910125 -95679163 + MIR SINE MIR 87 189 -19 2084 91 7 7 chr10 49911317 49911602 -95677686 - AluSq SINE Alu -23 290 6 1195 103 12 0 chr10 49912085 49912250 -95677038 + AluSg/x SINE Alu 129 295 -17 355 346 69 27 chr10 49912321 49912509 -95676779 - MIR SINE MIR 0 262 67 764 191 0 15 chr10 49912790 49912921 -95676367 + FLAM_A SINE Alu 1 129 -4 2201 85 0 10 chr10 49913017 49913323 -95675965 + AluY SINE Alu 2 304 -7 258 293 44 44 chr10 49913476 49913681 -95675607 + L1MEd LINE L1 941 1145 -4974 709 150 98 31 chr10 49913683 49913876 -95675412 + L1MD1 LINE L1 6037 6242 0 663 157 119 0 chr10 49913880 49914039 -95675249 - L1M4 LINE L1 -841 5305 5128 965 192 79 23 chr10 49914046 49914260 -95675028 - MLT1A1 LTR MaLR 0 365 140 6369 116 19 24 chr10 49914279 49914462 -95674826 - L1PB1 LINE L1 -1 6150 5967 1868 143 34 0 chr10 49914462 49914755 -95674533 - AluSx SINE Alu -7 305 3 6369 116 19 24 chr10 49914755 49914939 -95674349 - L1PB1 LINE L1 -184 5967 5783 288 0 0 0 chr10 49914939 49914971 -95674317 + (TG)n Simple_repeat Simple_repeat 2 33 0 6369 116 19 24 chr10 49914971 49915960 -95673328 - L1PB1 LINE L1 -368 5783 4808 2096 128 0 0 chr10 49915960 49916266 -95673022 - AluSx SINE Alu 0 312 7 6369 116 19 24 chr10 49916266 49916458 -95672830 - L1PB1 LINE L1 -1343 4808 4616 735 196 28 7 chr10 49916465 49916608 -95672680 - MLT1A1 LTR MaLR -215 150 5 4084 224 85 73 chr10 49916612 49916692 -95672596 - L1M4 LINE L1 -1042 5104 5026 2286 70 3 20 chr10 49916692 49916994 -95672294 - AluY SINE Alu -14 297 1 4084 224 85 73 chr10 49916994 49918586 -95670702 - L1M4 LINE L1 -1120 5026 3402 2086 164 50 16 chr10 49918586 49918963 -95670325 + MLT1B LTR MaLR 1 390 0 4084 224 85 73 chr10 49918963 49919297 -95669991 - L1M4 LINE L1 -2744 3402 3073 498 239 14 29 chr10 49919316 49919454 -95669834 - L1ME LINE L1 -5925 145 10 282 242 169 45 chr10 49919461 49919639 -95669649 + L1ME LINE L1 5555 5754 -367 1372 233 48 18 chr10 49919640 49919720 -95669568 - MER58B DNA MER1_type -2079 341 265 2131 165 22 3 chr10 49919720 49920078 -95669210 - MLT1A1 LTR MaLR 0 365 1 1372 233 48 18 chr10 49920078 49920327 -95668961 - MER58B DNA MER1_type -2155 265 2 693 231 77 74 chr10 49920375 49920515 -95668773 - L1MD1 LINE L1 -8 6234 6096 1799 118 10 36 chr10 49920515 49920678 -95668610 - AluSx SINE Alu -16 296 143 1724 171 3 0 chr10 49920678 49920977 -95668311 - AluSq SINE Alu -13 300 1 1799 118 10 36 chr10 49920977 49921117 -95668171 - AluSx SINE Alu -169 143 1 693 231 77 74 chr10 49921117 49921288 -95668000 - L1MD1 LINE L1 -146 6096 5922 951 166 0 0 chr10 49921299 49921450 -95667838 + FRAM SINE Alu 8 158 -18 371 195 12 12 chr10 49921450 49921532 -95667756 - L1MD1 LINE L1 -313 5929 5848 24 32 0 0 chr10 49922200 49922231 -95667057 + AT_rich Low_complexity Low_complexity 1 31 0 1601 137 0 0 chr10 49922241 49922475 -95666813 + AluSx SINE Alu 1 234 -78 242 295 40 35 chr10 49922641 49922787 -95666501 - L1M4 LINE L1 -840 5306 5157 2059 113 23 0 chr10 49922787 49923089 -95666199 - AluSg SINE Alu -1 309 1 242 295 40 35 chr10 49923089 49923115 -95666173 - L1M4 LINE L1 -989 5157 5133 1367 162 59 53 chr10 49923329 49923632 -95665656 - AluJo SINE Alu -7 305 1 1363 178 4 12 chr10 49923763 49924016 -95665272 - AluJo SINE Alu -14 298 48 1711 196 143 39 chr10 49924016 49924506 -95664782 + MER74A LTR ERVL 6 546 -12 321 293 76 19 chr10 49924521 49924768 -95664520 - L1MDa LINE L1 -875 1615 1324 204 111 0 0 chr10 49924769 49924805 -95664483 + (TTTTA)n Simple_repeat Simple_repeat 1 36 0 43866 44 6 0 chr10 49924805 49930887 -95658401 - L1PA4 LINE L1 -24 6131 15 1969 120 10 0 chr10 49930887 49931186 -95658102 - AluSx SINE Alu -10 302 1 364 285 24 60 chr10 49931298 49931596 -95657692 - L1MDa LINE L1 -4910 1209 923 345 245 146 14 chr10 49932408 49932527 -95656761 + MIR SINE MIR 2 124 -84 366 42 0 0 chr10 49932561 49932609 -95656679 + (TA)n Simple_repeat Simple_repeat 2 49 0 2093 135 0 0 chr10 49932610 49932922 -95656366 - AluSx SINE Alu 0 312 1 523 297 136 30 chr10 49933143 49933379 -95655909 - MIR SINE MIR 0 262 2 188 372 12 0 chr10 49933395 49933481 -95655807 + MIR SINE MIR 159 245 -17 566 277 79 5 chr10 49933895 49934097 -95655191 - MIR SINE MIR -11 251 35 364 242 11 11 chr10 49934641 49934732 -95654556 + MIR SINE MIR 37 127 -81 594 39 0 0 chr10 49935819 49935896 -95653392 + (CA)n Simple_repeat Simple_repeat 2 78 0 513 317 34 90 chr10 49936222 49936667 -95652621 - LTR67 LTR ERVL 0 557 138 182 441 11 0 chr10 49936746 49936934 -95652354 - L2 LINE L2 -581 2733 2544 1939 236 70 36 chr10 49937112 49937642 -95651646 + MLT1K LTR MaLR 4 551 -37 312 300 21 36 chr10 49938534 49938674 -95650614 + MIR SINE MIR 49 186 -76 4166 167 64 18 chr10 49939089 49940345 -95648943 - L1MB8 LINE L1 0 6178 4873 1028 290 106 22 chr10 49940582 49941076 -95648212 - L1MC4a LINE L1 -913 5233 5189 2094 129 0 10 chr10 49941076 49941385 -95647903 - AluSx SINE Alu -6 306 1 1028 290 106 22 chr10 49941385 49942105 -95647183 - L1MC4a LINE L1 -957 5189 4531 423 242 86 54 chr10 49942857 49943043 -95646245 + MLT1J LTR MaLR 210 401 -110 1663 188 95 87 chr10 49943045 49943561 -95645727 - MLT2B1 LTR ERVL 0 520 1 327 49 0 0 chr10 49943585 49943626 -95645662 + (TCCC)n Simple_repeat Simple_repeat 4 44 0 2092 112 17 0 chr10 49943626 49943920 -95645368 - AluSx SINE Alu -13 299 1 304 315 55 6 chr10 49944116 49944281 -95645007 - L2 LINE L2 -212 3060 2888 195 42 0 0 chr10 49944814 49944838 -95644450 + (TA)n Simple_repeat Simple_repeat 2 25 0 286 282 45 3 chr10 49945543 49945640 -95643648 + MER5A DNA MER1_type 15 126 -63 185 324 86 9 chr10 49945549 49945654 -95643634 - MER5A DNA MER1_type -22 167 55 * 1999 123 13 7 chr10 49946349 49946657 -95642631 + AluJo SINE Alu 3 312 0 317 266 133 7 chr10 49946781 49946924 -95642364 + Charlie8 DNA MER1_type 86 246 -2171 1685 179 10 0 chr10 49947542 49947839 -95641449 - AluJo SINE Alu -12 300 1 1878 121 28 7 chr10 49948000 49948290 -95640998 + AluSx SINE Alu 1 296 -16 1838 151 0 3 chr10 49948640 49948938 -95640350 - AluJb SINE Alu -15 297 1 341 62 0 0 chr10 49949639 49949687 -95639601 + L1PA16 LINE L1 6112 6159 -7 897 286 73 17 chr10 49952374 49952787 -95636501 + L1ME4a LINE L1 5476 5911 -210 240 228 101 0 chr10 49952851 49952930 -95636358 + L1ME4a LINE L1 6004 6090 -31 434 306 66 42 chr10 49956153 49956470 -95632818 - L1ME1 LINE L1 -338 5828 5508 1160 263 100 50 chr10 49956743 49957812 -95631476 - L2 LINE L2 -1 3312 2200 435 289 31 68 chr10 49958151 49958418 -95630870 - MIR SINE MIR 0 262 1 545 282 57 53 chr10 49958644 49958906 -95630382 + L1MB4 LINE L1 5 267 -6275 4161 114 67 20 chr10 49958936 49959796 -95629492 - MER11A LTR ERVK -344 892 1 2289 163 36 0 chr10 49959800 49960218 -95629070 + L1MB4 LINE L1 1432 1864 -4782 297 167 0 0 chr10 49960230 49960278 -95629010 - MLT2C2 LTR ERVL 0 464 417 197 105 0 26 chr10 49960299 49960337 -95628951 + (CATATA)n Simple_repeat Simple_repeat 5 41 0 1950 164 37 8 chr10 49960340 49960694 -95628594 - MER47A DNA MER2_type 0 366 3 255 61 0 0 chr10 49960694 49960727 -95628561 + (TG)n Simple_repeat Simple_repeat 2 34 0 182 36 0 36 chr10 49960729 49960757 -95628531 + (GA)n Simple_repeat Simple_repeat 1 27 0 640 174 33 16 chr10 49960776 49960897 -95628391 - MLT2C2 LTR ERVL -183 281 159 5554 188 59 22 chr10 49960897 49961936 -95627352 + L1MB4 LINE L1 4550 5681 -997 1715 138 0 72 chr10 49961936 49962255 -95627033 - AluJb SINE Alu -15 297 2 5554 188 59 22 chr10 49962255 49962988 -95626300 + L1MB4 LINE L1 5681 6385 -293 2642 82 166 129 chr10 49963027 49963587 -95625701 + LTR12 LTR ERV1 1 581 -133 675 196 65 6 chr10 49963587 49963755 -95625533 + L1MB4 LINE L1 6490 6667 -11 1112 208 44 85 chr10 49963914 49964304 -95624984 + MLT1A2 LTR MaLR 1 374 0 313 200 14 14 chr10 49964378 49964448 -95624840 + L2 LINE L2 2992 3061 -211 207 260 115 0 chr10 49964536 49964632 -95624656 + L2 LINE L2 2171 2277 -1037 371 183 0 0 chr10 49964690 49964750 -95624538 - Tigger5 DNA MER2_type 0 2323 2264 259 116 0 23 chr10 49964771 49964814 -95624474 - Tigger5 DNA MER2_type -2268 55 14 311 229 14 0 chr10 49964815 49964885 -95624403 - Tigger5 DNA MER2_type 0 2323 2253 285 252 56 42 chr10 49965102 49965245 -95624043 + L2 LINE L2 2565 2709 -605 276 304 75 116 chr10 49965332 49965694 -95623594 + L2 LINE L2 2924 3270 -2 223 337 11 0 chr10 49965704 49965796 -95623492 + MIR SINE MIR 56 148 -114 715 288 90 10 chr10 49966698 49966997 -95622291 + MLT1J2 LTR MaLR 110 432 -18 405 195 23 0 chr10 49967621 49967708 -95621580 - MIR SINE MIR -115 147 59 180 0 0 0 chr10 49968278 49968298 -95620990 + (A)n Simple_repeat Simple_repeat 1 20 0 1978 104 0 64 chr10 49968604 49968901 -95620387 - AluSx SINE Alu -32 280 3 1411 141 86 24 chr10 49968902 49969157 -95620131 + MER4E LTR ERV1 509 779 0 2684 123 8 58 chr10 49969158 49969654 -95619634 + MER4E-int LTR ERV1 2 472 -6286 242 307 0 13 chr10 49970031 49970106 -95619182 + CT-rich Low_complexity Low_complexity 2 75 0 1345 141 0 72 chr10 49970541 49970846 -95618442 - AluJo SINE Alu -29 283 1 343 62 0 0 chr10 49971547 49971595 -95617693 + L1PA16 LINE L1 6112 6159 -7 915 286 73 17 chr10 49974282 49974695 -95614593 + L1ME4a LINE L1 5476 5911 -210 272 215 101 0 chr10 49974759 49974838 -95614450 + L1ME4a LINE L1 6004 6090 -31 434 313 66 42 chr10 49977997 49978377 -95610911 - L1ME1 LINE L1 -338 5828 5508 1199 261 100 50 chr10 49978650 49979719 -95609569 - L2 LINE L2 -1 3312 2200 436 293 31 68 chr10 49980058 49980325 -95608963 - MIR SINE MIR 0 262 1 545 282 57 53 chr10 49980551 49980813 -95608475 + L1MB4 LINE L1 5 267 -6275 4191 113 67 20 chr10 49980843 49981703 -95607585 - MER11A LTR ERVK -344 892 1 2289 163 36 0 chr10 49981707 49982125 -95607163 + L1MB4 LINE L1 1432 1864 -4782 297 167 0 0 chr10 49982137 49982185 -95607103 - MLT2C2 LTR ERVL 0 464 417 197 105 0 26 chr10 49982206 49982244 -95607044 + (CATATA)n Simple_repeat Simple_repeat 5 41 0 1950 164 37 8 chr10 49982247 49982601 -95606687 - MER47A DNA MER2_type 0 366 3 255 61 0 0 chr10 49982601 49982634 -95606654 + (TG)n Simple_repeat Simple_repeat 2 34 0 182 36 0 36 chr10 49982636 49982664 -95606624 + (GA)n Simple_repeat Simple_repeat 1 27 0 640 174 33 16 chr10 49982683 49982804 -95606484 - MLT2C2 LTR ERVL -183 281 159 5636 188 57 22 chr10 49982804 49983847 -95605441 + L1MB4 LINE L1 4550 5679 -999 1715 138 0 72 chr10 49983847 49984166 -95605122 - AluJb SINE Alu -15 297 2 5636 188 57 22 chr10 49984166 49984899 -95604389 + L1MB4 LINE L1 5679 6385 -293 2392 76 239 137 chr10 49984938 49985465 -95603823 + LTR12 LTR ERV1 1 581 -133 675 196 65 6 chr10 49985465 49985633 -95603655 + L1MB4 LINE L1 6490 6667 -11 1166 207 38 84 chr10 49985792 49986184 -95603104 + MLT1A2 LTR MaLR 1 374 0 313 200 14 14 chr10 49986258 49986328 -95602960 + L2 LINE L2 2992 3061 -211 232 329 125 0 chr10 49986416 49986568 -95602720 + L2 LINE L2 2171 2341 -973 360 200 0 0 chr10 49986570 49986630 -95602658 - Tigger5 DNA MER2_type 0 2323 2264 259 116 0 23 chr10 49986651 49986694 -95602594 - Tigger5 DNA MER2_type -2268 55 14 311 229 14 0 chr10 49986695 49986765 -95602523 - Tigger5 DNA MER2_type 0 2323 2253 285 252 56 42 chr10 49986982 49987125 -95602163 + L2 LINE L2 2565 2709 -605 276 304 75 116 chr10 49987212 49987574 -95601714 + L2 LINE L2 2924 3270 -2 223 337 11 0 chr10 49987584 49987676 -95601612 + MIR SINE MIR 56 148 -114 735 290 87 10 chr10 49988580 49988880 -95600408 + MLT1J2 LTR MaLR 110 432 -18 412 289 57 73 chr10 49989567 49990336 -95598952 - L1MEd LINE L1 -4869 1250 521 1011 265 146 24 chr10 49990736 49991324 -95597964 - L1M4 LINE L1 -1537 4609 3950 * 14203 159 23 11 chr10 49991318 49995102 -95594186 - L1MA4A LINE L1 -6 6297 2468 8758 163 15 10 chr10 49995238 49997798 -95591490 + L1PB3 LINE L1 3579 6152 -2 282 311 70 60 chr10 49997830 49998132 -95591156 - L1MEd LINE L1 -5566 553 249 228 188 0 0 chr10 49998635 49998699 -95590589 + CT-rich Low_complexity Low_complexity 1 64 0 266 139 0 0 chr10 49998989 49999032 -95590256 - L1MEd LINE L1 -4920 1199 1157 528 236 27 36 chr10 49999282 49999478 -95589810 - MIR3 SINE MIR -56 152 3 504 86 0 0 chr10 50001432 50001502 -95587786 + (CTGGGG)n Simple_repeat Simple_repeat 4 73 0 1808 185 16 7 chr10 50004475 50004778 -95584510 - AluJb SINE Alu -6 306 1 462 288 18 37 chr10 50006563 50006726 -95582562 - L2 LINE L2 0 3313 3154 2548 261 147 82 chr10 50007128 50007274 -95582014 - HAL1 LINE L1 -109 2398 2263 2388 87 0 7 chr10 50007274 50007572 -95581716 - AluY SINE Alu -15 296 1 2548 261 147 82 chr10 50007572 50007844 -95581444 - HAL1 LINE L1 -244 2263 2010 2124 127 0 0 chr10 50007844 50008151 -95581137 - AluSx SINE Alu 0 307 1 2548 261 147 82 chr10 50008151 50008999 -95580289 - HAL1 LINE L1 -497 2010 1218 2188 101 0 67 chr10 50008999 50009192 -95580096 - AluSx SINE Alu -6 306 142 2302 108 0 7 chr10 50009192 50009498 -95579790 - AluSp SINE Alu -9 304 1 2188 101 0 67 chr10 50009498 50009632 -95579656 - AluSx SINE Alu -170 142 1 2548 261 147 82 chr10 50009632 50010289 -95578999 - HAL1 LINE L1 -1289 1218 347 1124 175 67 111 chr10 50010289 50010631 -95578657 + MLT1A1 LTR MaLR 1 327 -38 559 238 83 11 chr10 50010635 50010816 -95578472 - HAL1 LINE L1 -2298 209 16 400 394 39 26 chr10 50011030 50011413 -95577875 + L2 LINE L2 2852 3239 -33 243 0 0 0 chr10 50011421 50011448 -95577840 + (A)n Simple_repeat Simple_repeat 1 27 0 188 339 40 40 chr10 50014584 50014708 -95574580 - L2 LINE L2 -28 3244 3121 619 296 111 34 chr10 50014902 50015372 -95573916 - L2 LINE L2 -432 2882 2377 197 286 29 14 chr10 50017453 50017523 -95571765 + L2 LINE L2 3241 3311 -2 252 0 0 0 chr10 50017837 50017865 -95571423 + (A)n Simple_repeat Simple_repeat 1 28 0 256 261 190 10 chr10 50018361 50018473 -95570815 - MIR SINE MIR -70 138 14 288 0 0 0 chr10 50018973 50019005 -95570283 + (TG)n Simple_repeat Simple_repeat 2 33 0 630 0 0 0 chr10 50019921 50019991 -95569297 + (GGAA)n Simple_repeat Simple_repeat 3 72 0 796 246 57 46 chr10 50022511 50022791 -95566497 + MLT1J LTR MaLR 3 285 -226 297 268 246 14 chr10 50024501 50024643 -95564645 - MIR SINE MIR -2 260 86 2477 218 88 57 chr10 50026279 50026447 -95562841 + L1MD1 LINE L1 14 175 -6365 1351 148 194 12 chr10 50026447 50026777 -95562511 + MLT1B LTR MaLR 1 390 0 2477 218 88 57 chr10 50026777 50026868 -95562420 + L1MD1 LINE L1 175 262 -6278 207 0 0 0 chr10 50026868 50026891 -95562397 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2477 218 88 57 chr10 50026891 50027444 -95561844 + L1MD1 LINE L1 262 1089 -5451 673 125 0 39 chr10 50027445 50027573 -95561715 + AluSg/x SINE Alu 189 311 -1 6168 200 60 41 chr10 50027580 50028162 -95561126 + L1MD1 LINE L1 1180 1750 -4790 261 0 0 0 chr10 50028162 50028191 -95561097 + (TG)n Simple_repeat Simple_repeat 2 30 0 6168 200 60 41 chr10 50028191 50028461 -95560827 + L1MD1 LINE L1 1750 2014 -4526 2139 104 3 31 chr10 50028461 50028778 -95560510 - AluSg1 SINE Alu -1 308 1 6168 200 60 41 chr10 50028778 50029998 -95559290 + L1MD1 LINE L1 2014 3210 -3330 1791 149 54 35 chr10 50029998 50030366 -95558922 - THE1C LTR MaLR 0 375 1 6168 200 60 41 chr10 50030366 50030906 -95558382 + L1MD1 LINE L1 3210 3739 -2801 866 62 78 8 chr10 50030906 50031035 -95558253 + MER85 DNA T2_type 1 138 -1 6168 200 60 41 chr10 50031035 50031624 -95557664 + L1MD1 LINE L1 3739 4446 -2094 1930 216 25 8 chr10 50031623 50032096 -95557192 - L1M4 LINE L1 -1817 4329 3849 * 3991 153 42 12 chr10 50032097 50032869 -95556419 + L1MD1 LINE L1 5842 6636 0 230 0 33 0 chr10 50033000 50033030 -95556258 + (CAAAAA)n Simple_repeat Simple_repeat 6 36 0 190 243 71 0 chr10 50034422 50034492 -95554796 - MER5B DNA MER1_type -1 177 103 * 202 254 91 100 chr10 50034461 50034571 -95554717 + MER5A DNA MER1_type 57 165 -24 652 340 84 20 chr10 50035586 50036195 -95553093 + L2 LINE L2 364 1011 -2303 1527 181 43 15 chr10 50036196 50036542 -95552746 + MLT1B LTR MaLR 3 368 -6 1168 315 182 24 chr10 50036640 50037888 -95551400 + L2 LINE L2 1140 2647 -667 306 305 111 32 chr10 50038529 50038808 -95550480 - L2 LINE L2 -76 3237 2937 595 296 56 47 chr10 50040398 50040736 -95548552 + L1ME3A LINE L1 5544 5884 -286 401 295 29 7 chr10 50041572 50041711 -95547577 + MIR SINE MIR 90 231 -31 308 94 19 0 chr10 50042737 50042790 -95546498 + (TCCA)n Simple_repeat Simple_repeat 3 56 0 898 97 23 17 chr10 50042842 50043018 -95546270 + (TCCA)n Simple_repeat Simple_repeat 2 178 0 386 280 26 85 chr10 50043030 50043219 -95546069 - L2 LINE L2 0 3313 3136 456 215 271 6 chr10 50043388 50043565 -95545723 + MER5C DNA MER1_type 101 324 0 279 333 131 31 chr10 50043576 50044155 -95545133 - L2 LINE L2 -420 2894 2258 198 0 0 0 chr10 50044283 50044305 -95544983 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 425 195 23 0 chr10 50044867 50044954 -95544334 + MIR SINE MIR 59 147 -115 394 130 40 10 chr10 50045684 50045784 -95543504 + CT-rich Low_complexity Low_complexity 3 105 0 256 170 0 0 chr10 50047336 50047383 -95541905 - L2 LINE L2 0 3272 3226 519 250 94 28 chr10 50048237 50048417 -95540871 + MIR SINE MIR 21 212 -50 213 289 60 12 chr10 50048773 50048856 -95540432 + MIR SINE MIR 106 192 -70 404 269 54 15 chr10 50049085 50049215 -95540073 - MIR3 SINE MIR -68 140 6 241 190 190 25 chr10 50049320 50049399 -95539889 + MIR SINE MIR 121 212 -50 231 305 9 38 chr10 50053459 50053564 -95535724 + C-rich Low_complexity Low_complexity 3 104 0 30 27 0 0 chr10 50057541 50057578 -95531710 + GC_rich Low_complexity Low_complexity 1 37 0 528 295 20 0 chr10 50058876 50059025 -95530263 + MIR SINE MIR 20 171 -91 190 188 62 0 chr10 50059466 50059514 -95529774 + MIR SINE MIR 82 132 -76 376 242 165 33 chr10 50060105 50060287 -95529001 - MIR SINE MIR -11 251 46 571 302 148 0 chr10 50060941 50061143 -95528145 - MIR SINE MIR -21 241 10 466 310 120 62 chr10 50063088 50063472 -95525816 - L1ME3A LINE L1 -241 5929 5524 2000 176 38 8 chr10 50063474 50063866 -95525422 - MER47B DNA MER2_type -1 417 14 399 234 69 17 chr10 50063882 50064057 -95525231 - L1ME3A LINE L1 -663 5521 5338 269 357 0 10 chr10 50064321 50064419 -95524869 + MIR SINE MIR 45 141 -121 421 242 83 0 chr10 50064437 50064569 -95524719 + MIR SINE MIR 65 207 -55 356 236 86 21 chr10 50065710 50065850 -95523438 - MIR SINE MIR -33 229 81 2477 93 0 3 chr10 50066199 50066510 -95522778 + AluSg SINE Alu 1 310 0 677 230 53 7 chr10 50067002 50067154 -95522134 - MIR SINE MIR -79 183 25 185 270 16 32 chr10 50067656 50067719 -95521569 + L2 LINE L2 3194 3255 -17 1594 163 50 7 chr10 50068681 50068958 -95520330 + AluJo SINE Alu 1 289 -23 180 0 0 0 chr10 50069705 50069725 -95519563 + (CCCTG)n Simple_repeat Simple_repeat 2 21 0 287 316 135 11 chr10 50069741 50070023 -95519265 + L2 LINE L2 2899 3215 -98 786 230 0 12 chr10 50070470 50070631 -95518657 + FRAM SINE Alu 1 159 -7 995 219 58 37 chr10 50070870 50071310 -95517978 + LTR65 LTR ERV1 167 649 -20 182 255 64 0 chr10 50071399 50071446 -95517842 - MIR SINE MIR -96 166 117 412 308 99 0 chr10 50071617 50071799 -95517489 + MER102b DNA MER1_type 138 337 -4 194 354 13 13 chr10 50071804 50071883 -95517405 - L3 LINE CR1 -80 1497 1419 635 188 88 44 chr10 50072842 50073002 -95516286 - MER5A DNA MER1_type -11 178 12 551 160 0 0 chr10 50073374 50073468 -95515820 - AluSg/x SINE Alu -2 307 214 369 174 0 0 chr10 50075344 50075413 -95513875 + CT-rich Low_complexity Low_complexity 3 71 0 2193 132 7 0 chr10 50075435 50075738 -95513550 - AluSx SINE Alu -7 305 1 180 309 11 53 chr10 50076052 50076146 -95513142 + L2 LINE L2 2992 3081 -191 2643 242 57 16 chr10 50076550 50077906 -95511382 + L1M4c LINE L1 2197 3639 -2743 2254 98 119 18 chr10 50077908 50078295 -95510993 + MSTA LTR MaLR 1 426 -2 598 268 70 8 chr10 50078343 50078586 -95510702 + L2 LINE L2 2165 2422 -892 2375 98 0 0 chr10 50078646 50078942 -95510346 - AluSx SINE Alu -16 296 1 670 232 73 0 chr10 50078955 50079119 -95510169 - L1MB5 LINE L1 -8 6166 5991 4211 180 24 14 chr10 50079124 50079312 -95509976 - L1MB5 LINE L1 -400 5774 5589 4201 84 1 72 chr10 50079312 50079968 -95509320 - LTR66 LTR ERVL 0 610 1 4211 180 24 14 chr10 50079968 50081154 -95508134 - L1MB5 LINE L1 -585 5589 4383 1133 184 91 118 chr10 50081155 50081214 -95508074 - MSTC LTR MaLR 0 428 369 2312 109 3 3 chr10 50081214 50081525 -95507763 - AluSq SINE Alu -2 311 1 1133 184 91 118 chr10 50081525 50081572 -95507716 - MSTC LTR MaLR -59 369 322 2109 98 36 0 chr10 50081572 50081878 -95507410 - AluSx SINE Alu 0 316 1 1133 184 91 118 chr10 50081878 50081904 -95507384 - MSTC LTR MaLR -106 322 297 4330 124 18 1 chr10 50081904 50082573 -95506715 - L1MA6 LINE L1 0 6300 5621 1133 184 91 118 chr10 50082573 50082876 -95506412 - MSTC LTR MaLR -131 297 2 3856 224 68 36 chr10 50082880 50083177 -95506111 - L1MB5 LINE L1 -1769 4377 4091 1565 192 15 93 chr10 50083177 50083573 -95505715 - MLT1A1 LTR MaLR 0 365 1 3856 224 68 36 chr10 50083573 50084277 -95505011 - L1MB5 LINE L1 -2055 4091 3313 2046 129 70 17 chr10 50084277 50084633 -95504655 + THE1C LTR MaLR 1 375 0 3856 224 68 36 chr10 50084633 50085060 -95504228 - L1MB5 LINE L1 -2833 3313 2901 1437 242 90 16 chr10 50085181 50085694 -95503594 - L1MEc LINE L1 -2741 3474 2924 181 237 258 11 chr10 50086050 50086143 -95503145 + MIR SINE MIR 36 151 -111 252 250 103 43 chr10 50087587 50087703 -95501585 - MER5A DNA MER1_type -10 179 57 483 248 38 0 chr10 50087714 50087819 -95501469 - MIR SINE MIR 0 262 154 2739 200 25 52 chr10 50087820 50088460 -95500828 + MLT1E3 LTR MaLR 2 624 0 3569 130 44 38 chr10 50089053 50089683 -95499605 - MER51A LTR ERV1 0 634 1 797 288 109 45 chr10 50089753 50090176 -95499112 - L2 LINE L2 -1 3312 2863 5481 148 37 40 chr10 50090308 50090740 -95498548 - Tigger3b DNA MER2_type -1947 1081 649 1545 132 123 0 chr10 50090740 50090991 -95498297 + AluJb SINE Alu 17 298 -14 5481 148 37 40 chr10 50090991 50091429 -95497859 - Tigger3b DNA MER2_type -2379 649 212 1668 194 42 0 chr10 50091429 50091712 -95497576 - AluJo SINE Alu -17 295 1 5481 148 37 40 chr10 50091712 50091924 -95497364 - Tigger3b DNA MER2_type -2816 212 1 520 283 86 9 chr10 50091925 50092158 -95497130 - L2 LINE L2 -1092 2222 1972 2385 96 3 0 chr10 50092269 50092570 -95496718 + AluSx SINE Alu 1 302 -10 3383 235 111 106 chr10 50092778 50093777 -95495511 - L1MEc LINE L1 -3290 2925 1933 689 185 8 0 chr10 50093777 50093896 -95495392 + MER20 DNA MER1_type 100 219 0 3383 235 111 106 chr10 50093896 50094408 -95494880 - L1MEc LINE L1 -4282 1933 1425 628 62 0 0 chr10 50094408 50094489 -95494799 - AluY SINE Alu -14 297 217 3383 235 111 106 chr10 50094489 50095667 -95493621 - L1MEc LINE L1 -4790 1425 54 675 153 7 80 chr10 50095682 50095804 -95493484 + L1MC1 LINE L1 5444 5555 -778 2092 119 41 0 chr10 50095804 50096099 -95493189 - AluSx SINE Alu -5 307 1 675 153 7 80 chr10 50096099 50096126 -95493162 + L1MC1 LINE L1 5555 5582 -751 2442 146 48 26 chr10 50096130 50096549 -95492739 + MSTA LTR MaLR 1 428 0 484 220 0 0 chr10 50096582 50096673 -95492615 - AluJ/FLAM SINE Alu -220 92 2 3483 155 65 19 chr10 50096674 50097350 -95491938 + L1MC1 LINE L1 5576 6282 -51 222 91 0 0 chr10 50097350 50097383 -95491905 + (TC)n Simple_repeat Simple_repeat 2 34 0 321 26 0 0 chr10 50097383 50097421 -95491867 + (CA)n Simple_repeat Simple_repeat 1 38 0 1758 174 0 10 chr10 50097933 50098232 -95491056 + AluJo SINE Alu 5 300 -12 461 253 158 6 chr10 50098413 50098571 -95490717 + MER5A DNA MER1_type 8 189 0 270 211 53 0 chr10 50098619 50098695 -95490593 - L1ME4a LINE L1 -102 6019 5940 1387 236 57 41 chr10 50098695 50099186 -95490102 - L1ME4a LINE L1 -132 5989 5491 2131 157 24 11 chr10 50099187 50099564 -95489724 - MSTA LTR MaLR 0 428 47 1252 190 121 18 chr10 50099667 50099999 -95489289 - MLT2B3 LTR ERVL -188 366 1 640 317 115 24 chr10 50100159 50100497 -95488791 - L2 LINE L2 -9 3304 2936 482 259 22 35 chr10 50100687 50100915 -95488373 + L1MB3 LINE L1 4777 5001 -1145 766 233 142 42 chr10 50101366 50101462 -95487826 + L1MB3 LINE L1 5146 5231 -943 1928 142 0 77 chr10 50101462 50101800 -95487488 - AluSx SINE Alu 0 312 1 766 233 142 42 chr10 50101800 50102141 -95487147 + L1MB3 LINE L1 5231 5620 -554 438 171 0 0 chr10 50102149 50102225 -95487063 + Charlie3 DNA MER1_type 1 76 -2634 712 151 24 8 chr10 50102353 50102479 -95486809 - MER2 DNA MER2_type -215 130 3 1670 209 23 10 chr10 50102479 50102872 -95486416 + L1MB3 LINE L1 5784 6181 -2 22 0 0 0 chr10 50102911 50102933 -95486355 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr10 50103012 50103034 -95486254 + AT_rich Low_complexity Low_complexity 1 22 0 361 372 27 37 chr10 50103309 50103497 -95485791 + MIR SINE MIR 64 249 -13 2830 171 46 5 chr10 50103734 50104555 -95484733 - L1M2 LINE L1 -711 5589 4741 1146 153 89 32 chr10 50104569 50104850 -95484438 - Tigger2 DNA MER2_type -75 2643 2347 219 318 0 0 chr10 50105156 50105219 -95484069 + C-rich Low_complexity Low_complexity 4 66 0 330 256 11 6 chr10 50105225 50105401 -95483887 + CT-rich Low_complexity Low_complexity 2 178 0 201 94 0 0 chr10 50105521 50105553 -95483735 + (TC)n Simple_repeat Simple_repeat 2 33 0 1038 111 14 0 chr10 50107002 50107146 -95482142 + L1PA10 LINE L1 6018 6163 -5 22 35 0 0 chr10 50107267 50107296 -95481992 + AT_rich Low_complexity Low_complexity 1 29 0 2222 170 14 0 chr10 50107407 50107765 -95481523 + MER47A DNA MER2_type 4 366 0 1107 205 16 77 chr10 50108136 50108448 -95480840 + AluJb SINE Alu 2 294 -8 1062 90 0 0 chr10 50108719 50108852 -95480436 + AluSq/x SINE Alu 1 133 -180 2167 132 7 0 chr10 50108855 50109198 -95480090 + AluSx SINE Alu 1 345 0 249 281 209 0 chr10 50109332 50109471 -95479817 - L2 LINE L2 -585 2729 2562 260 218 0 36 chr10 50109643 50109698 -95479590 + polypyrimidine Low_complexity Low_complexity 4 56 0 375 159 0 40 chr10 50111887 50112107 -95477181 + AluJo SINE Alu 1 292 -10 1264 196 0 63 chr10 50112676 50112993 -95476295 - AluJo SINE Alu -13 299 3 267 128 0 0 chr10 50113730 50113769 -95475519 + MSTA LTR MaLR 390 428 0 898 75 42 0 chr10 50113779 50113899 -95475389 - MER75 DNA T2_type 0 514 390 780 134 89 0 chr10 50113907 50114019 -95475269 + AluSq/x SINE Alu 5 126 -186 2313 92 0 3 chr10 50114022 50114317 -95474971 + AluSc SINE Alu 3 296 -13 2693 130 8 0 chr10 50114319 50114704 -95474584 - MER75 DNA T2_type -126 388 1 260 300 86 7 chr10 50114748 50114888 -95474400 + HAL1b LINE L1 506 656 -692 949 126 0 0 chr10 50114936 50115071 -95474217 + AluJb SINE Alu 1 135 -177 779 259 30 22 chr10 50115072 50115342 -95473946 + HAL1b LINE L1 663 934 -414 662 207 52 11 chr10 50115341 50115515 -95473773 - L1M4 LINE L1 -833 5313 5133 * 1110 238 34 47 chr10 50115528 50115915 -95473373 + L1ME1 LINE L1 5724 6105 -61 378 286 25 12 chr10 50115822 50115983 -95473305 + L1MA10 LINE L1 6169 6331 -3 * 2154 118 16 3 chr10 50116031 50116336 -95472952 - AluSq SINE Alu -4 309 1 802 150 17 0 chr10 50116687 50116807 -95472481 - AluSq/x SINE Alu -182 130 9 286 91 0 0 chr10 50116821 50116865 -95472423 - Alu SINE Alu 0 302 259 299 316 18 6 chr10 50117289 50117460 -95471828 + L1ME4a LINE L1 5710 5882 -239 727 214 146 10 chr10 50117786 50117978 -95471310 - Tigger1 DNA MER2_type 0 2418 2201 539 182 250 20 chr10 50117945 50118093 -95471195 - Tigger1 DNA MER2_type -2236 182 1 * 310 355 138 5 chr10 50118194 50118411 -95470877 - MIR SINE MIR -4 258 13 1503 177 37 27 chr10 50118658 50118957 -95470331 - AluJo SINE Alu -10 302 1 1719 125 4 15 chr10 50119038 50119302 -95469986 - AluSx SINE Alu -3 309 49 21 0 0 0 chr10 50120085 50120106 -95469182 + AT_rich Low_complexity Low_complexity 1 21 0 417 261 116 7 chr10 50121747 50121885 -95467403 - MIR SINE MIR -82 180 28 527 65 0 0 chr10 50122958 50123020 -95466268 + Alu SINE Alu 2 63 -255 1997 140 0 34 chr10 50123167 50123517 -95465771 + AluSx SINE Alu 1 339 0 296 75 0 0 chr10 50123954 50123994 -95465294 - Alu SINE Alu -7 301 262 6958 180 40 7 chr10 50124134 50126103 -95463185 + L1P5 LINE L1 3770 5791 -360 335 171 101 23 chr10 50126409 50126538 -95462750 - MER4E LTR ERV1 -627 139 1 1272 164 42 104 chr10 50126546 50126882 -95462406 + MLT1B LTR MaLR 76 390 0 2068 125 0 7 chr10 50127088 50127376 -95461912 + AluSx SINE Alu 1 286 -26 4396 102 2 0 chr10 50127412 50127963 -95461325 - MER41A LTR ERV1 0 554 3 1851 157 0 11 chr10 50129837 50130145 -95459143 - AluJb SINE Alu 0 305 1 1649 171 0 37 chr10 50132383 50132704 -95456584 - AluJo SINE Alu -3 309 1 2205 91 0 10 chr10 50132800 50133098 -95456190 - AluY SINE Alu -16 295 1 1856 143 29 0 chr10 50133515 50133795 -95455493 - AluSx SINE Alu -24 288 1 336 212 24 155 chr10 50134165 50134326 -95454962 + MIR SINE MIR 4 147 -69 211 176 22 121 chr10 50134778 50134846 -95454442 + MIR SINE MIR 39 97 -165 1775 211 118 17 chr10 50134846 50135037 -95454251 + MLT1D LTR MaLR 1 171 -334 1518 176 3 54 chr10 50135037 50135350 -95453938 + AluJo SINE Alu 1 297 -15 1775 211 118 17 chr10 50135350 50135617 -95453671 + MLT1D LTR MaLR 171 505 0 211 176 22 121 chr10 50135617 50135639 -95453649 + MIR SINE MIR 97 120 -142 293 306 11 36 chr10 50136228 50136446 -95452842 + GA-rich Low_complexity Low_complexity 1 212 0 2650 122 5 0 chr10 50136728 50137097 -95452191 + L1PB1 LINE L1 5781 6151 0 784 229 78 23 chr10 50137097 50137315 -95451973 - MER63C DNA MER1_type -532 398 169 463 116 0 197 chr10 50137606 50137671 -95451617 - MER63 DNA MER1_type -343 717 695 2152 112 21 0 chr10 50137671 50137956 -95451332 - AluSx SINE Alu -21 291 1 463 116 0 197 chr10 50137956 50138037 -95451251 - MER63 DNA MER1_type -365 695 600 497 111 0 0 chr10 50139120 50139183 -95450105 + AluJ/FLAM SINE Alu 2 64 -248 413 94 0 16 chr10 50139330 50139394 -95449894 + MER4E LTR ERV1 714 776 -3 239 0 32 0 chr10 50139829 50139860 -95449428 + (CA)n Simple_repeat Simple_repeat 2 33 0 3502 130 47 6 chr10 50140234 50140441 -95448847 - MER41C LTR ERV1 0 554 357 339 25 0 0 chr10 50140441 50140481 -95448807 + (TG)n Simple_repeat Simple_repeat 1 40 0 3502 130 47 6 chr10 50140481 50140803 -95448485 - MER41C LTR ERV1 -197 357 3 24 77 0 0 chr10 50141155 50141207 -95448081 + AT_rich Low_complexity Low_complexity 1 52 0 228 337 20 0 chr10 50141293 50141391 -95447897 + MIR3 SINE MIR 95 194 -14 200 264 0 28 chr10 50142152 50142184 -95447104 + T-rich Low_complexity Low_complexity 1 32 -38 2838 128 21 26 chr10 50142184 50142612 -95446676 + MSTB LTR MaLR 1 426 0 200 264 0 28 chr10 50142612 50142651 -95446637 + T-rich Low_complexity Low_complexity 32 70 0 2280 118 0 0 chr10 50142838 50143144 -95446144 + AluSx SINE Alu 7 312 0 225 97 0 0 chr10 50143374 50143405 -95445883 + MER46A DNA MER2_type 1 31 -205 268 341 52 22 chr10 50146094 50146229 -95443059 - L2 LINE L2 -220 3052 2914 4013 200 19 1 chr10 50146561 50147297 -95441991 - MST-int LTR MaLR 0 1651 903 257 279 85 31 chr10 50148550 50148679 -95440609 - L1MC/D LINE L1 -391 5851 5716 1127 171 51 14 chr10 50151215 50151418 -95437870 + MER46A DNA MER2_type 13 226 -2505 2685 113 3 45 chr10 50151418 50151798 -95437490 + THE1B LTR MaLR 1 364 0 1127 171 51 14 chr10 50151798 50151810 -95437478 + MER46A DNA MER2_type 226 236 0 267 261 54 9 chr10 50152021 50152132 -95437156 - L1MC3 LINE L1 -962 6823 6708 1140 139 35 0 chr10 50152739 50152912 -95436376 - AluSg/x SINE Alu 0 312 134 2090 112 0 3 chr10 50152912 50153198 -95436090 - AluSx SINE Alu -5 307 23 341 260 305 24 chr10 50153243 50153489 -95435799 + L2 LINE L2 2989 3303 -10 22 0 0 0 chr10 50153548 50153570 -95435718 + AT_rich Low_complexity Low_complexity 1 22 0 326 292 11 0 chr10 50154957 50155046 -95434242 + MIR SINE MIR 13 102 -160 417 305 60 0 chr10 50155054 50155079 -95434209 - L1MA10 LINE L1 0 6334 6310 2024 221 21 65 chr10 50155079 50155651 -95433637 - L1ME1 LINE L1 -16 6150 5604 2283 67 7 40 chr10 50155651 50155951 -95433337 - AluY SINE Alu -21 290 1 2024 221 21 65 chr10 50155951 50155983 -95433305 - L1ME1 LINE L1 -562 5604 5572 24 0 0 0 chr10 50157865 50157889 -95431399 + AT_rich Low_complexity Low_complexity 1 24 0 412 215 6 153 chr10 50158047 50158210 -95431078 + MIR SINE MIR 66 204 -58 1572 139 9 104 chr10 50158255 50158571 -95430717 - MER2 DNA MER2_type -58 287 2 449 346 21 30 chr10 50158830 50159064 -95430224 - MIR SINE MIR -22 240 9 2216 101 7 0 chr10 50159946 50160243 -95429045 + AluSx SINE Alu 1 299 -13 253 273 23 0 chr10 50160291 50160379 -95428909 + L1MC4 LINE L1 6614 6703 -1339 323 311 0 0 chr10 50160387 50160477 -95428811 + L1MC4 LINE L1 6614 6703 -1339 276 30 0 0 chr10 50160481 50160514 -95428774 + (CA)n Simple_repeat Simple_repeat 2 34 0 418 132 22 15 chr10 50161183 50161272 -95428016 + L1P1 LINE L1 5374 5466 -689 1947 175 28 50 chr10 50161286 50161400 -95427888 + L1MB8 LINE L1 5419 5534 -644 2083 113 17 3 chr10 50161400 50161691 -95427597 - AluSc SINE Alu -14 295 1 1947 175 28 50 chr10 50161691 50161998 -95427290 + L1MB8 LINE L1 5534 5831 -347 1315 162 33 11 chr10 50161999 50162270 -95427018 + L1MB8 LINE L1 5902 6178 0 1651 173 0 53 chr10 50162359 50162682 -95426606 - AluJo SINE Alu -5 307 2 342 0 0 0 chr10 50163194 50163232 -95426056 + (TAAA)n Simple_repeat Simple_repeat 1 38 0 2396 82 0 7 chr10 50165080 50165384 -95423904 - AluY SINE Alu -9 302 1 180 0 0 0 chr10 50166896 50166916 -95422372 + (A)n Simple_repeat Simple_repeat 1 20 0 474 186 132 23 chr10 50166968 50167055 -95422233 + L1ME2 LINE L1 6022 6129 -35 183 42 0 0 chr10 50167055 50167079 -95422209 + (CA)n Simple_repeat Simple_repeat 2 25 0 474 186 132 23 chr10 50167079 50167120 -95422168 + L1ME2 LINE L1 6129 6164 0 1810 162 17 3 chr10 50167186 50167482 -95421806 - AluJb SINE Alu -12 300 1 266 290 90 10 chr10 50167744 50167844 -95421444 - MIR SINE MIR -102 160 53 2208 126 0 0 chr10 50168504 50168806 -95420482 - AluSq SINE Alu -11 302 1 229 210 120 40 chr10 50169598 50169698 -95419590 + L1M4 LINE L1 5122 5229 -917 337 330 11 0 chr10 50170037 50170128 -95419160 - MER74A LTR ERVL -63 495 404 1721 147 19 42 chr10 50171428 50171735 -95417553 - AluJo SINE Alu -12 300 1 313 272 19 10 chr10 50173187 50173290 -95415998 - MIR SINE MIR -46 216 113 222 278 33 33 chr10 50175489 50175579 -95413709 - MIR SINE MIR -77 185 96 1395 122 0 5 chr10 50176074 50176271 -95413017 + AluSq SINE Alu 95 290 -23 214 359 88 19 chr10 50176324 50176483 -95412805 - L2 LINE L2 -908 2406 2237 2155 56 0 4 chr10 50177173 50177442 -95411846 + L1PA10 LINE L1 5712 5979 -189 206 380 28 42 chr10 50177710 50177852 -95411436 + MIR3 SINE MIR 16 155 -53 285 350 81 0 chr10 50178491 50178614 -95410674 - MIR3 SINE MIR -3 205 73 199 321 7 102 chr10 50178628 50178765 -95410523 + L2 LINE L2 2930 3053 -219 644 298 13 14 chr10 50178848 50179033 -95410255 - MIR SINE MIR -62 146 2 215 287 111 50 chr10 50179039 50179220 -95410068 + L2 LINE L2 3105 3296 -17 2241 113 0 0 chr10 50179258 50179559 -95409729 + AluSx SINE Alu 1 301 -11 2168 125 0 0 chr10 50179992 50180296 -95408992 + AluSx SINE Alu 1 304 -8 528 268 42 84 chr10 50180427 50181331 -95407957 - L1MC/D LINE L1 -869 5260 4608 2235 222 48 54 chr10 50181508 50182026 -95407262 + LTR40a LTR ERVL 4 518 -1 766 301 60 93 chr10 50182054 50182196 -95407092 - L1MC/D LINE L1 -4982 1137 992 1876 160 10 7 chr10 50182196 50182496 -95406792 - AluSx SINE Alu -11 301 1 766 301 60 93 chr10 50182496 50182834 -95406454 - L1MC/D LINE L1 -5127 992 644 393 22 0 0 chr10 50182834 50182880 -95406408 + (TG)n Simple_repeat Simple_repeat 2 47 0 766 301 60 93 chr10 50182880 50183546 -95405742 - L1MC/D LINE L1 -5475 644 28 2142 123 28 3 chr10 50184475 50184801 -95404487 - MSTA LTR MaLR -94 334 1 331 266 106 0 chr10 50185129 50185223 -95404065 + L2 LINE L2 3191 3294 -19 346 240 103 55 chr10 50185244 50185390 -95403898 - L2 LINE L2 -48 3265 3113 217 319 118 7 chr10 50185406 50185550 -95403738 - L2 LINE L2 -151 3162 3003 236 294 0 43 chr10 50185924 50186016 -95403272 - L2 LINE L2 -36 3277 3190 845 230 36 0 chr10 50186043 50186239 -95403049 - MER63 DNA MER1_type -343 717 515 1134 172 0 5 chr10 50186264 50186462 -95402826 + L1PBa LINE L1 4 200 -6663 * 13441 133 92 9 chr10 50186454 50189949 -95399339 + L1PBa LINE L1 625 4412 -2450 288 0 0 0 chr10 50190510 50190542 -95398746 + (A)n Simple_repeat Simple_repeat 1 32 0 2036 125 6 22 chr10 50190842 50191155 -95398133 - AluSx SINE Alu -4 308 1 315 270 80 10 chr10 50192709 50192809 -95396479 + MIR SINE MIR 86 192 -70 1597 186 3 26 chr10 50193651 50193962 -95395326 + AluJo SINE Alu 1 304 -8 32 0 0 0 chr10 50194627 50194659 -95394629 + AT_rich Low_complexity Low_complexity 1 32 0 1717 163 14 10 chr10 50194659 50194948 -95394340 - AluJo SINE Alu -22 290 1 1953 120 38 7 chr10 50195276 50195567 -95393721 + AluSx SINE Alu 1 300 -12 2083 108 0 69 chr10 50196472 50196807 -95392481 + AluSx SINE Alu 1 312 0 22 0 0 0 chr10 50197559 50197581 -95391707 + GC_rich Low_complexity Low_complexity 1 22 0 2160 99 7 3 chr10 50198076 50198369 -95390919 - AluSc SINE Alu -15 294 1 2313 113 0 0 chr10 50199358 50199669 -95389619 + AluSx SINE Alu 1 311 -1 226 122 0 49 chr10 50199875 50199916 -95389372 + LTR67 LTR ERVL 519 557 0 900 189 19 61 chr10 50199964 50200135 -95389153 + MER3 DNA MER1_type 7 169 -40 2180 116 0 3 chr10 50200135 50200429 -95388859 + AluSx SINE Alu 1 293 -19 900 189 19 61 chr10 50200429 50200469 -95388819 + MER3 DNA MER1_type 169 209 0 199 208 0 38 chr10 50200496 50200549 -95388739 + L3b LINE CR1 1303 1353 -230 1708 165 84 14 chr10 50200654 50201011 -95388277 - MLT1B LTR MaLR -8 382 1 285 29 0 0 chr10 50201838 50201872 -95387416 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 768 133 106 0 chr10 50201872 50201985 -95387303 - FLAM_C SINE Alu -17 126 2 255 333 83 0 chr10 50201993 50202101 -95387187 + L2 LINE L2 3011 3127 -186 1469 166 85 30 chr10 50202103 50202398 -95386890 + MLT1B LTR MaLR 1 311 -79 203 156 44 0 chr10 50202422 50202467 -95386821 + T-rich Low_complexity Low_complexity 2 48 0 1459 135 11 135 chr10 50202634 50202903 -95386385 + MLT1B LTR MaLR 85 303 -87 1813 172 3 10 chr10 50202903 50203205 -95386083 - AluSx SINE Alu -8 304 5 1459 135 11 135 chr10 50203205 50203284 -95386004 + MLT1B LTR MaLR 303 390 0 397 274 71 0 chr10 50203324 50203437 -95385851 + L2 LINE L2 3174 3294 -19 210 313 15 0 chr10 50203827 50203894 -95385394 + L2 LINE L2 3244 3311 -2 224 177 32 0 chr10 50204414 50204476 -95384812 + A-rich Low_complexity Low_complexity 5 68 0 429 20 0 0 chr10 50204894 50204944 -95384344 + (TG)n Simple_repeat Simple_repeat 2 51 0 214 254 90 0 chr10 50205081 50205148 -95384140 - L2 LINE L2 -678 2636 2564 238 292 117 22 chr10 50205298 50205478 -95383810 - L2 LINE L2 -325 2988 2793 1014 153 44 57 chr10 50205549 50205561 -95383727 - L1MC2 LINE L1 -1 6343 6332 2095 118 7 0 chr10 50205561 50205857 -95383431 + AluSx SINE Alu 1 298 -14 1014 153 44 57 chr10 50205857 50206072 -95383216 - L1MC2 LINE L1 -12 6332 6119 913 120 33 34 chr10 50206158 50206336 -95382952 + MLT1C LTR MaLR 1 168 -229 460 226 165 0 chr10 50206629 50206744 -95382544 - MLT1D LTR MaLR -347 158 25 1840 124 0 8 chr10 50206943 50207202 -95382086 - AluSc SINE Alu -17 292 36 704 167 25 0 chr10 50207711 50207831 -95381457 + AluJo SINE Alu 2 124 -188 2104 128 7 0 chr10 50207845 50208134 -95381154 + AluSx SINE Alu 5 295 -17 351 57 51 68 chr10 50208134 50208311 -95380977 + (TA)n Simple_repeat Simple_repeat 1 174 0 22 35 0 0 chr10 50208315 50208344 -95380944 + AT_rich Low_complexity Low_complexity 1 29 0 926 131 42 48 chr10 50208344 50208512 -95380776 + AluJo SINE Alu 132 298 -14 534 284 104 67 chr10 50211404 50211711 -95377577 + L1ME4a LINE L1 5512 5806 -315 2032 125 3 7 chr10 50211711 50212006 -95377282 + AluSx SINE Alu 1 294 -18 534 284 104 67 chr10 50212006 50212282 -95377006 + L1ME4a LINE L1 5806 6117 -4 2265 88 3 14 chr10 50212496 50212793 -95376495 - AluSx SINE Alu -18 294 1 328 332 81 27 chr10 50213631 50213929 -95375359 + L2 LINE L2 2484 2797 -517 292 356 69 5 chr10 50213945 50214133 -95375155 + L2 LINE L2 2911 3110 -203 803 212 13 93 chr10 50214159 50214277 -95375011 + MER58A DNA MER1_type 2 93 -2327 1891 173 0 19 chr10 50214277 50214458 -95374830 - AluSx SINE Alu 0 312 138 2530 53 30 0 chr10 50214458 50214760 -95374528 - AluY SINE Alu 0 311 1 1891 173 0 19 chr10 50214760 50214896 -95374392 - AluSx SINE Alu -174 138 1 803 212 13 93 chr10 50214896 50215013 -95374275 + MER58A DNA MER1_type 93 218 -6 339 263 0 12 chr10 50215014 50215094 -95374194 + L2 LINE L2 3227 3305 -8 254 239 57 23 chr10 50215899 50215987 -95373301 - MIR SINE MIR -114 148 58 2140 111 0 27 chr10 50217182 50217479 -95371809 - AluSx SINE Alu -23 289 1 207 0 0 0 chr10 50217978 50218001 -95371287 + (A)n Simple_repeat Simple_repeat 1 23 0 2081 72 0 4 chr10 50219403 50219654 -95369634 + AluSc SINE Alu 41 290 -19 2389 155 62 0 chr10 50219878 50220279 -95369009 + MSTB LTR MaLR 1 426 0 594 272 53 0 chr10 50220551 50220720 -95368568 - MIR SINE MIR -32 230 53 180 0 0 0 chr10 50220772 50220792 -95368496 + (TGGGGG)n Simple_repeat Simple_repeat 1 20 0 2665 114 48 29 chr10 50220868 50221216 -95368072 + MSTA LTR MaLR 1 360 -68 2475 72 9 9 chr10 50221216 50221550 -95367738 - L1PA8 LINE L1 0 6172 5839 2665 114 48 29 chr10 50221550 50221621 -95367667 + MSTA LTR MaLR 360 428 0 1033 216 32 5 chr10 50221622 50221840 -95367448 - MER58A DNA MER1_type 0 224 1 1487 151 76 31 chr10 50223422 50223739 -95365549 + THE1C LTR MaLR 1 331 -44 1439 179 4 0 chr10 50223739 50223973 -95365315 - AluSq SINE Alu -78 235 1 265 146 0 0 chr10 50223973 50224014 -95365274 + THE1C LTR MaLR 388 428 0 2418 110 0 0 chr10 50224445 50224753 -95364535 + AluSx SINE Alu 1 308 -4 1541 237 70 33 chr10 50224919 50225430 -95363858 + L1ME1 LINE L1 5633 6162 -4 2072 123 27 0 chr10 50226336 50226637 -95362651 - AluSg SINE Alu -1 309 1 511 287 0 24 chr10 50226945 50227109 -95362179 - MIR SINE MIR -74 188 29 2029 115 31 0 chr10 50227249 50227570 -95361718 + L1MA2 LINE L1 5963 6293 -11 1089 101 0 13 chr10 50227812 50227971 -95361317 + AluSg/x SINE Alu 152 308 -2 283 280 131 27 chr10 50228040 50228376 -95360912 + L1MC4 LINE L1 5593 5963 -1845 1623 175 14 27 chr10 50228546 50228838 -95360450 + AluJb SINE Alu 1 288 -24 2043 124 3 3 chr10 50228865 50229168 -95360120 + AluSx SINE Alu 1 303 0 961 146 6 6 chr10 50229251 50229409 -95359879 - L1PB3 LINE L1 -1 6153 5996 289 255 71 21 chr10 50229424 50229565 -95359723 + L1ME4a LINE L1 5969 6116 -5 545 280 77 6 chr10 50229812 50229980 -95359308 - MLT1L LTR MaLR -5 610 431 1143 101 0 6 chr10 50230524 50230683 -95358605 + AluSg/x SINE Alu 152 309 -1 913 248 102 8 chr10 50231566 50231820 -95357468 - MLT1L LTR MaLR 0 615 338 211 281 73 12 chr10 50231833 50231915 -95357373 + MIR SINE MIR 176 262 0 1397 172 33 127 chr10 50231960 50231992 -95357296 - MLT1B LTR MaLR 0 390 357 2240 115 81 0 chr10 50231992 50232339 -95356949 + THE1C LTR MaLR 1 375 0 1397 172 33 127 chr10 50232339 50232731 -95356557 - MLT1B LTR MaLR -33 357 6 248 210 49 0 chr10 50235861 50235942 -95353346 + L1MC4 LINE L1 6619 6703 -1339 897 185 0 0 chr10 50235969 50236126 -95353162 + AluJb SINE Alu 152 308 -4 318 301 23 74 chr10 50236212 50236388 -95352900 + MIR3 SINE MIR 39 205 -3 233 241 46 11 chr10 50237164 50237251 -95352037 + L2 LINE L2 2667 2756 -558 367 267 17 33 chr10 50237267 50237387 -95351901 + L2 LINE L2 3195 3312 -1 285 304 118 72 chr10 50237412 50237777 -95351511 + L2 LINE L2 2851 3240 -73 2699 100 68 0 chr10 50237777 50238188 -95351100 + L1PA13 LINE L1 5725 6163 0 285 304 118 72 chr10 50238188 50238253 -95351035 + L2 LINE L2 3240 3301 -12 2134 115 0 3 chr10 50238270 50238556 -95350732 + AluSg SINE Alu 1 285 -25 405 0 0 0 chr10 50238557 50238602 -95350686 + (TG)n Simple_repeat Simple_repeat 2 46 0 1812 167 0 3 chr10 50239249 50239549 -95349739 - AluSx SINE Alu -13 299 1 1241 230 71 40 chr10 50239810 50240263 -95349025 - MLT1C LTR MaLR 0 467 1 868 149 0 0 chr10 50240372 50240513 -95348775 - AluJo SINE Alu 0 312 172 983 135 5 125 chr10 50240724 50240798 -95348490 - AluJo SINE Alu -136 176 95 2069 133 0 13 chr10 50240798 50241106 -95348182 + AluSx SINE Alu 9 312 0 983 135 5 125 chr10 50241106 50241231 -95348057 - AluJo SINE Alu -217 95 1 248 270 0 16 chr10 50242145 50242208 -95347080 + CT-rich Low_complexity Low_complexity 4 65 0 1473 189 40 17 chr10 50242209 50242510 -95346778 - AluJb SINE Alu -4 308 1 264 293 12 0 chr10 50243671 50243753 -95345535 + MER103 DNA DNA 83 165 -1 367 267 337 0 chr10 50244907 50245195 -95344093 - L2 LINE L2 0 3313 2929 2521 296 120 17 chr10 50245224 50246636 -95342652 - L2 LINE L2 -480 2834 1277 757 222 148 14 chr10 50246744 50246960 -95342328 - L1ME LINE L1 -361 5803 5559 272 269 87 0 chr10 50247122 50247226 -95342062 + MIR3 SINE MIR 89 201 -7 411 298 35 7 chr10 50248180 50248321 -95340967 - L3 LINE CR1 -8 1569 1425 887 211 22 0 chr10 50248719 50248904 -95340384 + MER20 DNA MER1_type 30 218 -1 1624 172 26 30 chr10 50248967 50249270 -95340018 - AluJb SINE Alu -10 302 1 863 130 7 22 chr10 50251720 50251858 -95337430 + FLAM_C SINE Alu 1 136 -7 543 203 152 6 chr10 50252643 50252801 -95336487 + MER5A DNA MER1_type 4 184 -5 2229 105 6 16 chr10 50254142 50254456 -95334832 - AluSq SINE Alu -2 311 1 1459 297 91 10 chr10 50254493 50255176 -95334112 - MER20B DNA MER1_type -4 779 42 393 280 54 42 chr10 50255196 50255364 -95333924 - MIR SINE MIR -90 172 3 503 170 226 0 chr10 50255465 50255571 -95333717 + FLAM_C SINE Alu 4 133 -10 1766 175 3 22 chr10 50255577 50255891 -95333397 + AluJb SINE Alu 1 308 -4 294 233 123 0 chr10 50256242 50256315 -95332973 + MER94 DNA DNA 1 82 -52 4726 135 29 10 chr10 50258119 50258904 -95330384 + L1PA16 LINE L1 5367 6166 0 827 123 0 0 chr10 50259809 50259931 -95329357 - L1MA1 LINE L1 0 6302 6181 2809 90 0 6 chr10 50260063 50260429 -95328859 + THE1B LTR MaLR 1 364 0 737 190 103 77 chr10 50260620 50260815 -95328473 - MER20 DNA MER1_type 0 219 20 2341 71 0 3 chr10 50261071 50261353 -95327935 - AluY SINE Alu -16 295 15 293 301 7 27 chr10 50261660 50261806 -95327482 - MIR SINE MIR -41 221 79 15069 103 31 16 chr10 50262929 50266105 -95323183 - L1PA8 LINE L1 -5 6167 2958 2151 149 2 13 chr10 50266431 50266875 -95322413 - MER1A DNA MER1_type -1 528 4 446 239 9 15 chr10 50266993 50267128 -95322160 + MER33 DNA MER1_type 1 129 -89 865 161 44 0 chr10 50267180 50267360 -95321928 + MER33 DNA MER1_type 136 323 -1 1462 178 27 51 chr10 50268133 50268426 -95320862 + AluJo SINE Alu 1 286 -26 736 178 0 30 chr10 50268920 50269055 -95320233 - FLAM_C SINE Alu -2 131 1 1324 176 125 8 chr10 50269150 50269406 -95319882 + AluSg1 SINE Alu 1 286 -23 2393 120 92 2 chr10 50269903 50270296 -95318992 - MSTA LTR MaLR 0 428 1 570 221 71 0 chr10 50270850 50270963 -95318325 + FLAM_A SINE Alu 1 121 -12 23 33 0 0 chr10 50270966 50270996 -95318292 + AT_rich Low_complexity Low_complexity 1 30 0 1081 126 31 2 chr10 50271246 50271475 -95317813 + AluJb SINE Alu 21 298 -14 6434 134 14 1 chr10 50271927 50272961 -95316327 - L1P LINE L1 -3140 3006 1960 1785 163 66 37 chr10 50273162 50273559 -95315729 - L1MA2 LINE L1 0 6304 5897 415 213 104 67 chr10 50275719 50275883 -95313405 - MIR SINE MIR -14 248 79 279 150 250 0 chr10 50276994 50277054 -95312234 + MER87 LTR ERV1 107 181 -360 1343 171 74 119 chr10 50277116 50277578 -95311710 + LTR8A LTR ERV1 287 727 0 1631 212 27 63 chr10 50277578 50278107 -95311181 + MLT1-int LTR MaLR 42 662 -709 423 314 29 34 chr10 50278234 50278438 -95310850 + MLT1-int LTR MaLR 692 894 -477 459 174 0 0 chr10 50278480 50278549 -95310739 + Tigger2 DNA MER2_type 1 69 -2649 * 2638 138 24 20 chr10 50278533 50278983 -95310305 + Tigger2 DNA MER2_type 2267 2718 0 7921 162 6 6 chr10 50279140 50280861 -95308427 - L1PA13 LINE L1 -15 6148 4393 249 83 0 0 chr10 50280861 50280897 -95308391 + (TG)n Simple_repeat Simple_repeat 1 36 0 7921 162 6 6 chr10 50280897 50281318 -95307970 - L1PA13 LINE L1 -1769 4394 3974 881 212 21 74 chr10 50281407 50281690 -95307598 + LTR41 LTR ERVL 496 763 -10 3837 291 73 25 chr10 50282166 50283611 -95305677 + ERVL LTR ERVL 540 2219 -3475 1828 134 28 21 chr10 50283611 50283902 -95305386 - AluJb SINE Alu -8 304 12 3837 291 73 25 chr10 50283902 50284584 -95304704 + ERVL LTR ERVL 2219 2867 -2827 700 204 41 68 chr10 50284607 50284828 -95304460 - LTR41 LTR ERVL -6 767 553 516 202 0 20 chr10 50284832 50284931 -95304357 - HERV16 LTR ERVL -3177 1819 1723 1518 201 5 72 chr10 50284931 50285329 -95303959 + MLT1A2 LTR MaLR 1 374 0 494 243 115 14 chr10 50286322 50286470 -95302818 - LTR16A LTR ERVL 0 450 288 1627 128 27 96 chr10 50286506 50286881 -95302407 + MER4A LTR ERV1 1 349 -315 764 228 53 42 chr10 50286891 50287192 -95302096 + MER4C LTR ERV1 273 465 0 438 20 0 0 chr10 50287641 50287692 -95301596 + (CA)n Simple_repeat Simple_repeat 2 52 0 1398 239 128 57 chr10 50287704 50287763 -95301525 - MER20B DNA MER1_type -124 659 606 2403 93 0 0 chr10 50287763 50288064 -95301224 + AluSg SINE Alu 1 301 -9 1398 239 128 57 chr10 50288064 50288551 -95300737 - MER20B DNA MER1_type -177 606 74 253 262 208 38 chr10 50290151 50290334 -95298954 - MLT1H1 LTR MaLR -7 548 335 * 372 150 17 15 chr10 50290332 50290419 -95298869 + MLT1D LTR MaLR 365 421 -46 1611 192 26 0 chr10 50290441 50290743 -95298545 - L1M4 LINE L1 -1060 5086 4777 527 327 108 19 chr10 50290745 50291272 -95298016 + L2 LINE L2 2694 3304 -9 2521 172 90 28 chr10 50291432 50291933 -95297355 + MLT2B3 LTR ERVL 1 532 -22 325 221 19 38 chr10 50291937 50292095 -95297193 + (TCTCTG)n Simple_repeat Simple_repeat 2 156 0 346 141 0 7 chr10 50292095 50292163 -95297125 + MLT2B3 LTR ERVL 450 554 0 186 43 0 0 chr10 50292760 50292783 -95296505 + (CA)n Simple_repeat Simple_repeat 2 24 0 3027 163 73 51 chr10 50292861 50293572 -95295716 + LTR8A LTR ERV1 1 727 0 232 176 14 40 chr10 50293978 50294052 -95295236 + CT-rich Low_complexity Low_complexity 1 72 0 2545 103 54 42 chr10 50294186 50294612 -95294676 + LTR23 LTR ERV1 1 431 -6 2414 89 0 3 chr10 50294799 50295103 -95294185 - AluSg SINE Alu -7 303 1 3728 123 34 90 chr10 50295406 50295799 -95293489 + LTR8 LTR ERV1 1 415 -276 219 36 0 0 chr10 50295799 50295827 -95293461 + (C)n Simple_repeat Simple_repeat 1 28 0 3728 123 34 90 chr10 50295827 50295994 -95293294 + LTR8 LTR ERV1 415 513 -178 2000 143 10 0 chr10 50295994 50296295 -95292993 + AluSx SINE Alu 1 304 -8 3728 123 34 90 chr10 50296295 50296463 -95292825 + LTR8 LTR ERV1 513 689 -2 4317 113 28 2 chr10 50296463 50297082 -95292206 + MER41B LTR ERV1 1 635 0 4648 117 6 3 chr10 50297082 50297715 -95291573 + MER41B-int LTR ERV1 1 635 -5311 * 16412 113 54 18 chr10 50297705 50299816 -95289472 + MER41B-int LTR ERV1 1083 3306 -2640 1621 201 4 4 chr10 50299816 50300145 -95289143 + AluJb SINE Alu 3 331 0 16412 113 54 18 chr10 50300145 50300614 -95288674 + MER41B-int LTR ERV1 3306 3757 -2189 12068 96 28 34 chr10 50300600 50300736 -95288552 + MER41B-int LTR ERV1 4096 4231 -1715 * 2241 114 0 22 chr10 50300736 50301052 -95288236 - AluY SINE Alu -2 309 1 12068 96 28 34 chr10 50301052 50302778 -95286510 + MER41B-int LTR ERV1 4231 5946 0 4254 125 9 2 chr10 50302778 50303408 -95285880 + MER41B LTR ERV1 1 635 0 3439 174 43 48 chr10 50303807 50304146 -95285142 + LTR8A LTR ERV1 1 340 -387 2793 84 19 5 chr10 50304146 50304516 -95284772 + THE1C LTR MaLR 1 375 0 3439 174 43 48 chr10 50304516 50304902 -95284386 + LTR8A LTR ERV1 340 722 -5 588 256 82 31 chr10 50305163 50305300 -95283988 + MER63A DNA MER1_type 2 153 -1535 1427 207 58 28 chr10 50305300 50305663 -95283625 + MLT1A2 LTR MaLR 1 374 0 588 256 82 31 chr10 50305663 50305720 -95283568 + MER63A DNA MER1_type 153 206 -4 718 77 7 147 chr10 50305854 50305997 -95283291 - MLT1B LTR MaLR -267 123 1 313 230 150 0 chr10 50306009 50306109 -95283179 + LTR33 LTR ERVL 399 513 -8 2296 109 0 0 chr10 50306296 50306609 -95282679 + AluSq SINE Alu 1 313 0 23 0 0 0 chr10 50307737 50307760 -95281528 + GC_rich Low_complexity Low_complexity 1 23 0 257 351 98 46 chr10 50308124 50308409 -95280879 + L2 LINE L2 2558 2857 -457 1722 102 8 30 chr10 50308651 50308916 -95280372 + AluSq SINE Alu 39 297 -16 295 274 174 50 chr10 50308972 50309099 -95280189 + L2 LINE L2 3021 3131 -182 276 30 0 0 chr10 50309099 50309132 -95280156 + (TG)n Simple_repeat Simple_repeat 2 34 0 295 274 174 50 chr10 50309132 50309263 -95280025 + L2 LINE L2 3131 3311 -2 2457 68 3 0 chr10 50309263 50309570 -95279718 - AluSg SINE Alu -1 309 2 190 252 29 126 chr10 50310367 50310504 -95278784 + L2 LINE L2 1755 1867 -1447 2129 93 31 3 chr10 50310504 50310793 -95278495 - AluSq SINE Alu -16 297 1 190 252 29 126 chr10 50310793 50310861 -95278427 + L2 LINE L2 1867 1940 -1374 270 216 196 0 chr10 50311045 50311142 -95278146 + MER113 DNA MER1_type? 204 319 -202 181 239 164 0 chr10 50311299 50311366 -95277922 + L2 LINE L2 2222 2299 -1015 555 270 89 28 chr10 50312200 50312451 -95276837 - L1MC/D LINE L1 -520 5722 5443 2212 135 0 0 chr10 50312471 50312783 -95276505 - AluSx SINE Alu 0 312 1 28 48 0 0 chr10 50312793 50312835 -95276453 + AT_rich Low_complexity Low_complexity 1 42 0 1574 151 3 67 chr10 50312835 50313133 -95276155 - AluJb SINE Alu -33 279 1 210 281 0 0 chr10 50315489 50315546 -95273742 + L2 LINE L2 3215 3271 -1 596 157 0 29 chr10 50316150 50316252 -95273036 - Tigger5 DNA MER2_type 0 2323 2225 226 159 0 23 chr10 50316247 50316291 -95272997 - Tigger5 DNA MER2_type -2268 55 13 * 388 186 14 14 chr10 50316291 50316361 -95272927 - Tigger5 DNA MER2_type 0 2323 2254 325 218 0 0 chr10 50316333 50316388 -95272900 - Tigger5 DNA MER2_type -2268 55 1 * 222 37 0 0 chr10 50318760 50318787 -95270501 + (TG)n Simple_repeat Simple_repeat 2 28 0 1977 105 3 27 chr10 50318953 50319248 -95270040 - AluSq SINE Alu -25 288 1 1104 250 143 14 chr10 50320040 50320478 -95268810 + L1ME3A LINE L1 5122 5502 -668 531 74 0 0 chr10 50320478 50320559 -95268729 + (TA)n Simple_repeat Simple_repeat 2 82 0 1104 250 143 14 chr10 50320559 50320984 -95268304 + L1ME3A LINE L1 5502 6167 -3 971 209 78 5 chr10 50321195 50321386 -95267902 + MER3 DNA MER1_type 5 209 0 201 180 0 0 chr10 50322342 50322392 -95266896 + GA-rich Low_complexity Low_complexity 2 51 0 454 265 99 11 chr10 50325861 50326042 -95263246 + MER117 DNA MER1_type 1 197 0 203 313 35 61 chr10 50326358 50326473 -95262815 - MER5B DNA MER1_type -63 115 4 271 181 208 0 chr10 50328155 50328263 -95261025 - MIR SINE MIR -57 205 59 1362 132 44 5 chr10 50328796 50329000 -95260288 + AluJb SINE Alu 1 212 -100 836 59 0 0 chr10 50329080 50329181 -95260107 - MER85 DNA T2_type 0 139 39 351 47 0 0 chr10 50331482 50331525 -95257763 - MER85 DNA T2_type -96 43 1 513 263 61 109 chr10 50332647 50332810 -95256478 + MIR SINE MIR 1 150 -112 2121 130 68 8 chr10 50332810 50333164 -95256124 + THE1C LTR MaLR 1 375 0 513 263 61 109 chr10 50333164 50333247 -95256041 + MIR SINE MIR 150 235 -27 229 209 0 0 chr10 50333452 50333495 -95255793 + MIR SINE MIR 128 170 -92 1973 100 159 0 chr10 50333718 50334027 -95255261 + MER46B DNA MER2_type 1 233 -3 186 385 52 0 chr10 50334506 50334602 -95254686 - L3 LINE CR1 -588 989 889 1901 175 3 3 chr10 50334915 50335223 -95254065 + AluSx SINE Alu 1 308 -4 261 319 118 0 chr10 50335912 50336031 -95253257 - L2 LINE L2 0 3313 3181 210 250 50 0 chr10 50337280 50337340 -95251948 + MIR SINE MIR 123 185 -77 736 262 36 18 chr10 50337378 50337599 -95251689 - MIR SINE MIR -14 248 24 781 215 5 96 chr10 50338761 50339008 -95250280 - MER20 DNA MER1_type 0 219 1 944 214 112 0 chr10 50343770 50343966 -95245322 - MER20 DNA MER1_type -1 218 1 360 243 66 59 chr10 50343987 50344139 -95245149 + MIR SINE MIR 30 182 -80 1800 160 0 17 chr10 50344663 50344957 -95244331 - AluJb SINE Alu -13 299 11 21 36 0 0 chr10 50346479 50346507 -95242781 + AT_rich Low_complexity Low_complexity 1 28 0 2285 95 0 0 chr10 50349806 50350113 -95239175 - AluSq SINE Alu 0 307 1 356 241 0 0 chr10 50350158 50350237 -95239051 - L1ME4a LINE L1 -73 6048 5970 298 290 204 40 chr10 50350560 50351191 -95238097 - L2 LINE L2 -424 2890 2156 240 179 0 0 chr10 50351833 50351872 -95237416 - MLT1L LTR MaLR -130 485 447 22 0 0 0 chr10 50352288 50352310 -95236978 + AT_rich Low_complexity Low_complexity 1 22 0 777 250 71 28 chr10 50352394 50352606 -95236682 - MIR SINE MIR -21 241 21 225 257 48 29 chr10 50352620 50352725 -95236563 - L1ME4a LINE L1 -2031 5777 5671 263 254 75 0 chr10 50354232 50354299 -95234989 + L2 LINE L2 3137 3208 -64 2345 97 0 0 chr10 50356083 50356382 -95232906 + AluSg SINE Alu 3 301 -9 345 326 73 30 chr10 50357186 50357419 -95231869 + MIR SINE MIR 18 260 -2 2429 77 3 3 chr10 50357651 50357961 -95231327 + AluY SINE Alu 1 310 -1 550 265 21 58 chr10 50361378 50361567 -95227721 + MIR SINE MIR 3 184 -78 255 254 35 98 chr10 50361715 50361971 -95227317 - HAL1 LINE L1 -843 1664 1425 1696 194 0 0 chr10 50361982 50362276 -95227012 - AluJo SINE Alu -18 294 1 2014 144 6 6 chr10 50362425 50362737 -95226551 - AluJb SINE Alu 0 312 1 43 35 0 0 chr10 50362936 50362993 -95226295 + AT_rich Low_complexity Low_complexity 1 57 0 21 0 0 0 chr10 50364174 50364195 -95225093 + AT_rich Low_complexity Low_complexity 1 21 0 2377 174 130 83 chr10 50365399 50366145 -95223143 - L1MC4 LINE L1 -2 8040 7260 264 333 24 16 chr10 50366625 50366751 -95222537 - MIR3 SINE MIR -18 190 64 209 224 20 0 chr10 50367287 50367336 -95221952 + (CATA)n Simple_repeat Simple_repeat 2 51 0 967 228 128 52 chr10 50368628 50369072 -95220216 - L2 LINE L2 0 3313 2836 757 147 0 9 chr10 50371300 50371416 -95217872 - MER33 DNA MER1_type -209 115 1 182 276 53 66 chr10 50372647 50372723 -95216565 + MER5B DNA MER1_type 96 170 -8 24 32 0 0 chr10 50373291 50373322 -95215966 + AT_rich Low_complexity Low_complexity 1 31 0 328 173 68 179 chr10 50376983 50377145 -95212143 - L1MC4 LINE L1 -4 8038 7895 * 3254 184 101 39 chr10 50377140 50377913 -95211375 - L1MC4 LINE L1 -568 7474 6654 1797 249 59 35 chr10 50377962 50378651 -95210637 + L1ME1 LINE L1 36 818 -5578 1830 168 3 10 chr10 50378652 50378950 -95210338 + AluJb SINE Alu 1 296 -16 2836 207 98 51 chr10 50378953 50379451 -95209837 + L1ME1 LINE L1 5372 5924 -311 2022 100 22 0 chr10 50379451 50379721 -95209567 + AluSx SINE Alu 13 288 -24 2836 207 98 51 chr10 50379721 50380042 -95209246 + L1ME1 LINE L1 5924 6229 -6 1542 194 141 95 chr10 50380062 50380626 -95208662 - L1MC4a LINE L1 -1220 6588 6052 2372 129 34 17 chr10 50380626 50380983 -95208305 - THE1B LTR MaLR 0 364 2 12730 91 1 1 chr10 50380984 50382561 -95206727 - THE1B-int LTR MaLR 0 1580 4 2294 155 14 17 chr10 50382566 50382927 -95206361 - THE1B LTR MaLR -2 362 3 1542 194 141 95 chr10 50382927 50383090 -95206198 - L1MC4a LINE L1 -1759 6049 5819 2175 149 3 3 chr10 50383127 50383469 -95205819 + MER46B DNA MER2_type 20 236 0 991 221 93 54 chr10 50383553 50384163 -95205125 - L1MC4a LINE L1 -786 5360 4988 432 301 101 28 chr10 50384452 50384850 -95204438 - L1MC4a LINE L1 -1488 4658 4232 1796 100 115 7 chr10 50385611 50385881 -95203407 - AluSg1 SINE Alu -10 299 1 23 0 0 0 chr10 50387666 50387689 -95201599 + AT_rich Low_complexity Low_complexity 1 23 0 536 277 71 19 chr10 50389918 50390201 -95199087 + MLT1J LTR MaLR 3 332 -179 355 254 72 76 chr10 50390508 50390744 -95198544 - L1ME LINE L1 -631 5531 5297 460 306 72 41 chr10 50390847 50391262 -95198026 - L1ME LINE L1 -1321 4825 4398 311 308 60 30 chr10 50391451 50391685 -95197603 - L1M4 LINE L1 -1206 4940 4700 1385 204 101 75 chr10 50391767 50392155 -95197133 + L1MB8 LINE L1 4 401 -6458 * 1725 235 147 55 chr10 50392149 50393452 -95195836 + L1MB8 LINE L1 1622 3043 -3916 7085 227 74 27 chr10 50393658 50395245 -95194043 + L1MB8 LINE L1 3337 4850 -2139 2505 68 0 0 chr10 50395245 50395539 -95193749 + AluY SINE Alu 1 294 -17 7085 227 74 27 chr10 50395539 50396187 -95193101 + L1MB8 LINE L1 4850 5467 -1522 1688 201 13 0 chr10 50396187 50396485 -95192803 + AluJb SINE Alu 1 302 -10 7085 227 74 27 chr10 50396485 50396506 -95192782 + L1MB8 LINE L1 5467 5486 -1503 2204 100 59 0 chr10 50396506 50396795 -95192493 + AluSg SINE Alu 1 306 -4 7085 227 74 27 chr10 50396795 50397925 -95191363 + L1MB8 LINE L1 5486 6989 0 4019 159 75 24 chr10 50397960 50398629 -95190659 + L1MB5 LINE L1 5293 6011 -163 2316 68 6 53 chr10 50398629 50398950 -95190338 - AluY SINE Alu -5 306 1 4019 159 75 24 chr10 50398950 50399078 -95190210 + L1MB5 LINE L1 6011 6131 -43 487 281 30 33 chr10 50399351 50399526 -95189762 - L1MEd LINE L1 -4881 1238 1064 1459 164 9 116 chr10 50399526 50399862 -95189426 - AluJo SINE Alu -12 300 1 487 281 30 33 chr10 50399862 50400093 -95189195 - L1MEd LINE L1 -5055 1064 724 279 0 0 0 chr10 50400097 50400128 -95189160 + (TG)n Simple_repeat Simple_repeat 1 31 0 372 294 59 25 chr10 50400211 50400330 -95188958 - L1MEd LINE L1 -5532 587 465 256 314 118 33 chr10 50400403 50400556 -95188732 - L1MEd LINE L1 -5712 407 242 359 292 54 36 chr10 50400590 50400758 -95188530 - L1MEd LINE L1 -5937 182 12 217 125 0 25 chr10 50400789 50400829 -95188459 + MIR SINE MIR 203 241 -21 480 274 61 114 chr10 50400925 50401529 -95187759 - L1M4 LINE L1 -1907 4239 3668 2824 166 80 31 chr10 50402418 50402992 -95186296 - MER7C DNA MER2_type 0 602 1 2921 77 6 0 chr10 50405856 50406209 -95183079 + THE1A LTR MaLR 1 355 0 12389 94 6 3 chr10 50406209 50407785 -95181503 + THE1A-int LTR MaLR 1 1580 0 2708 89 20 0 chr10 50407785 50408133 -95181155 + THE1A LTR MaLR 1 355 0 728 142 0 0 chr10 50408334 50408447 -95180841 - MER2 DNA MER2_type -135 210 98 356 311 42 58 chr10 50408453 50408643 -95180645 - L1M4 LINE L1 -2796 3350 3164 237 328 10 20 chr10 50408913 50409036 -95180252 - L1ME3A LINE L1 -218 5935 5813 2475 126 3 24 chr10 50409036 50409408 -95179880 - THE1B LTR MaLR 0 364 1 237 328 10 20 chr10 50409408 50409479 -95179809 - L1ME3A LINE L1 -340 5813 5743 340 323 23 0 chr10 50409511 50409644 -95179644 - L1ME3A LINE L1 -400 5745 5610 233 336 55 0 chr10 50409673 50409819 -95179469 - L1ME3A LINE L1 -629 5516 5363 614 287 61 13 chr10 50409825 50410219 -95179069 - L1ME3A LINE L1 -804 5325 4913 * 1010 266 95 59 chr10 50410188 50410326 -95178962 - L1M4 LINE L1 -2984 3145 3014 2414 93 6 10 chr10 50410326 50410639 -95178649 - AluSx SINE Alu 0 312 1 1010 266 95 59 chr10 50410639 50411378 -95177910 - L1M4 LINE L1 -3115 3014 2258 503 324 162 58 chr10 50411384 50411550 -95177738 - L1ME3A LINE L1 -4081 2229 2082 1982 97 35 68 chr10 50411550 50411861 -95177427 - AluSq SINE Alu -12 301 1 503 324 162 58 chr10 50411861 50412527 -95176761 - L1ME3A LINE L1 -4228 2082 1310 2059 132 7 0 chr10 50412529 50412818 -95176470 - AluSx SINE Alu -21 291 1 466 269 64 59 chr10 50412838 50413170 -95176118 - L1ME3A LINE L1 -4864 1255 919 937 150 48 0 chr10 50413170 50413357 -95175931 - L1MA9 LINE L1 -1 6311 6116 466 269 64 59 chr10 50413357 50413463 -95175825 - L1ME3A LINE L1 -5200 919 815 352 98 0 33 chr10 50413546 50413607 -95175681 - L1MC1 LINE L1 0 6333 6275 404 304 66 66 chr10 50413959 50414216 -95175072 - L1ME3A LINE L1 -5609 510 254 1515 160 115 0 chr10 50414218 50414506 -95174782 + Ricksha DNA DNA 1 321 -933 * 3997 128 43 22 chr10 50414505 50415045 -95174243 + Ricksha DNA DNA 2506 3066 -180 1585 151 4 15 chr10 50415045 50415304 -95173984 - AluSx SINE Alu -13 299 44 3997 128 43 22 chr10 50415304 50415481 -95173807 + Ricksha DNA DNA 3066 3238 -8 993 188 89 7 chr10 50415719 50416001 -95173287 + MER33 DNA MER1_type 1 305 -19 940 155 124 0 chr10 50416001 50416162 -95173126 - AluJo SINE Alu -11 301 121 240 201 110 24 chr10 50416238 50416402 -95172886 + (TCCA)n Simple_repeat Simple_repeat 3 180 0 1045 203 20 0 chr10 50417026 50417223 -95172065 + MSTB LTR MaLR 13 213 -213 190 266 16 16 chr10 50417956 50418020 -95171268 + MIR SINE MIR 78 141 -67 1975 152 3 3 chr10 50418353 50418663 -95170625 + AluJb SINE Alu 1 310 -2 312 283 80 9 chr10 50419420 50419533 -95169755 + L1MC4 LINE L1 7534 7654 -388 538 260 0 20 chr10 50419567 50419717 -95169571 + L1MC4 LINE L1 7746 7892 -150 2152 133 154 0 chr10 50419928 50420297 -95168991 + MSTB LTR MaLR 1 426 0 41300 54 2 2 chr10 50420701 50426865 -95162423 + L1PA5 LINE L1 11 6171 0 191 335 106 6 chr10 50427230 50427388 -95161900 - MIR3 SINE MIR -76 186 12 211 301 89 55 chr10 50427593 50427739 -95161549 - MIR SINE MIR -73 189 39 201 107 0 0 chr10 50428112 50428140 -95161148 - MIR SINE MIR -68 140 113 366 259 247 12 chr10 50428853 50429112 -95160176 - L1ME4a LINE L1 -46 6075 5756 386 283 17 8 chr10 50429789 50429909 -95159379 - L1MC4 LINE L1 0 8042 7922 364 137 10 39 chr10 50429918 50430020 -95159268 + CT-rich Low_complexity Low_complexity 2 100 0 2199 216 187 10 chr10 50430056 50430854 -95158434 - L1MC4 LINE L1 -134 7908 6970 251 225 50 38 chr10 50431105 50431185 -95158103 - L1MC4 LINE L1 -1224 6818 6738 360 213 27 0 chr10 50431525 50431600 -95157688 - MIR SINE MIR -74 188 112 1437 145 112 0 chr10 50431849 50432098 -95157190 - Tigger3(Golem) DNA MER2_type 0 3038 2762 1042 185 9 51 chr10 50432098 50432314 -95156974 + AluJo SINE Alu 1 207 -105 498 256 146 0 chr10 50432383 50432520 -95156768 - MIR SINE MIR -73 189 33 198 294 13 26 chr10 50433311 50433388 -95155900 + MIR SINE MIR 69 143 -74 190 186 136 17 chr10 50433474 50433533 -95155755 + L2 LINE L2 3205 3270 -2 618 60 0 0 chr10 50434111 50434194 -95155094 + (TCCA)n Simple_repeat Simple_repeat 1 83 0 385 292 53 29 chr10 50434299 50434470 -95154818 + L1ME4a LINE L1 5947 6121 0 419 267 42 61 chr10 50434786 50434951 -95154337 + MIR SINE MIR 47 208 -54 321 302 99 36 chr10 50437077 50437329 -95151959 - L2 LINE L2 -104 3209 2942 228 200 35 0 chr10 50437684 50437769 -95151519 + (TCCA)n Simple_repeat Simple_repeat 1 88 0 822 108 108 0 chr10 50439014 50439134 -95150154 - AluJb SINE Alu -169 143 11 411 227 6 28 chr10 50439750 50439926 -95149362 + GA-rich Low_complexity Low_complexity 4 175 0 279 229 173 78 chr10 50440591 50440770 -95148518 - L2 LINE L2 0 3313 3118 818 161 24 0 chr10 50441719 50441969 -95147319 + GA-rich Low_complexity Low_complexity 1 256 0 639 223 16 0 chr10 50441980 50442231 -95147057 + GA-rich Low_complexity Low_complexity 1 255 0 453 177 26 0 chr10 50443403 50443516 -95145772 + GA-rich Low_complexity Low_complexity 1 116 0 1204 189 107 31 chr10 50444207 50444499 -95144789 - L1MC1 LINE L1 0 6333 6014 2427 81 0 0 chr10 50444499 50444795 -95144493 - AluSc SINE Alu -13 296 1 1204 189 107 31 chr10 50444795 50444820 -95144468 - L1MC1 LINE L1 -319 6014 5992 212 265 29 15 chr10 50444835 50444903 -95144385 - MIR SINE MIR -109 153 85 21 57 0 0 chr10 50449619 50449654 -95139634 + GC_rich Low_complexity Low_complexity 1 35 0 465 308 63 3 chr10 50452362 50452696 -95136592 - L1MC1 LINE L1 -1906 5902 5524 315 313 57 34 chr10 50452768 50452944 -95136344 - L1MC1 LINE L1 -720 5450 5271 299 329 34 58 chr10 50454743 50454961 -95134327 - MIR SINE MIR -51 211 3 225 94 0 0 chr10 50455797 50455829 -95133459 + (GAAA)n Simple_repeat Simple_repeat 1 32 0 653 260 20 0 chr10 50457742 50457888 -95131400 + MIR SINE MIR 37 185 -77 2087 143 0 13 chr10 50457963 50458277 -95131011 - AluSx SINE Alu -2 310 1 233 313 106 25 chr10 50458474 50458672 -95130616 + MER112 DNA MER1_type 29 242 -18 222 37 0 0 chr10 50460053 50460080 -95129208 + (CA)n Simple_repeat Simple_repeat 2 28 0 233 216 54 27 chr10 50460151 50460225 -95129063 - L2 LINE L2 -280 2992 2917 653 276 102 21 chr10 50461421 50461732 -95127556 - Charlie8 DNA MER1_type -1971 446 105 1285 208 85 18 chr10 50461732 50462074 -95127214 - MLT1A1 LTR MaLR 0 365 1 653 276 102 21 chr10 50462074 50462095 -95127193 - Charlie8 DNA MER1_type -2312 105 87 185 333 32 45 chr10 50462828 50462984 -95126304 - L2 LINE L2 -280 2992 2839 261 233 17 17 chr10 50463319 50463379 -95125909 - MIR SINE MIR -63 145 86 526 322 5 45 chr10 50464557 50464759 -95124529 + MIR SINE MIR 46 239 -23 25 31 0 0 chr10 50466216 50466248 -95123040 + AT_rich Low_complexity Low_complexity 1 32 0 1017 184 50 5 chr10 50466480 50466698 -95122590 - MER46A DNA MER2_type -7 229 2 216 181 0 42 chr10 50466722 50466794 -95122494 + (CATATA)n Simple_repeat Simple_repeat 6 74 0 380 192 0 0 chr10 50466795 50466868 -95122420 - L1ME3A LINE L1 -244 5926 5854 603 249 57 6 chr10 50466880 50467057 -95122231 - L1M4 LINE L1 -1885 4261 4076 972 191 99 22 chr10 50467062 50467335 -95121953 - L1MB8 LINE L1 -1 6177 5884 796 268 46 62 chr10 50467336 50467772 -95121516 - L1M4 LINE L1 -2060 4086 3658 731 292 121 11 chr10 50467791 50468266 -95121022 - MLT1H1 LTR MaLR -31 524 1 205 320 145 60 chr10 50468583 50468914 -95120374 - L2 LINE L2 -5 3267 2909 245 282 71 0 chr10 50469462 50469547 -95119741 - MIR SINE MIR -70 138 48 288 268 98 0 chr10 50470764 50470876 -95118412 - L1ME4a LINE L1 -13 6108 5986 247 294 6 47 chr10 50470972 50471111 -95118177 + (TATATG)n Simple_repeat Simple_repeat 4 136 -30 1906 178 30 36 chr10 50471111 50471476 -95117812 - MLT1A1 LTR MaLR -2 363 1 247 294 6 47 chr10 50471476 50471506 -95117782 + (TATATG)n Simple_repeat Simple_repeat 136 166 0 309 284 61 14 chr10 50471581 50471729 -95117559 - L1ME4a LINE L1 -252 5869 5715 38 22 0 0 chr10 50471787 50471832 -95117456 + AT_rich Low_complexity Low_complexity 1 45 0 356 125 0 0 chr10 50471832 50471888 -95117400 - U6 snRNA snRNA -51 56 1 183 42 0 0 chr10 50471909 50471933 -95117355 + (CAAAAA)n Simple_repeat Simple_repeat 4 27 0 1150 144 0 22 chr10 50473043 50473084 -95116204 - AluJo SINE Alu -135 177 137 2354 109 0 0 chr10 50473084 50473388 -95115900 - AluSx SINE Alu -8 304 1 1150 144 0 22 chr10 50473388 50473527 -95115761 - AluJo SINE Alu -175 137 1 333 320 245 16 chr10 50473934 50474375 -95114913 - L3 LINE CR1 -517 1060 519 2213 122 0 0 chr10 50474480 50474775 -95114513 - AluSx SINE Alu -17 295 1 1729 202 35 3 chr10 50475131 50475507 -95113781 - L1MB2 LINE L1 0 6171 5784 333 302 14 14 chr10 50476069 50476208 -95113080 - L1ME4a LINE L1 0 6121 5983 197 169 390 13 chr10 50476652 50476729 -95112559 + MIR3 SINE MIR 52 157 -51 1524 224 101 47 chr10 50477338 50477501 -95111787 - MER119 DNA MER1_type -54 529 376 1773 176 0 34 chr10 50477501 50477824 -95111464 - AluJo SINE Alu 0 312 1 1524 224 101 47 chr10 50477824 50478155 -95111133 - MER119 DNA MER1_type -207 376 8 490 220 96 22 chr10 50478177 50478317 -95110971 - MIR SINE MIR -62 146 35 26 30 0 0 chr10 50481186 50481219 -95108069 + AT_rich Low_complexity Low_complexity 1 33 0 492 326 21 0 chr10 50481504 50481645 -95107643 - MIR SINE MIR -46 216 73 407 258 225 0 chr10 50482223 50482374 -95106914 + MIR SINE MIR 56 240 -22 23 0 0 0 chr10 50483198 50483221 -95106067 + AT_rich Low_complexity Low_complexity 1 23 0 597 239 38 19 chr10 50484580 50484739 -95104549 + MIR SINE MIR 46 207 -55 342 226 0 4 chr10 50485302 50485375 -95103913 + MIR SINE MIR 90 161 -47 4407 157 14 19 chr10 50485718 50486570 -95102718 - L1MA4 LINE L1 0 6300 5453 819 232 71 25 chr10 50486575 50486998 -95102290 - L1MD3 LINE L1 -1 7994 5907 1353 199 5 91 chr10 50487096 50487494 -95101794 - MLT1A2 LTR MaLR 0 374 11 24 0 0 0 chr10 50487575 50487599 -95101689 + AT_rich Low_complexity Low_complexity 1 24 0 2437 147 40 0 chr10 50487599 50488021 -95101267 - L1MB3 LINE L1 -4 6179 5741 26 0 0 0 chr10 50488447 50488473 -95100815 + AT_rich Low_complexity Low_complexity 1 26 0 2211 94 3 13 chr10 50488637 50488935 -95100353 - AluY SINE Alu -16 295 1 22 0 0 0 chr10 50489178 50489200 -95100088 + AT_rich Low_complexity Low_complexity 1 22 0 440 98 0 0 chr10 50489723 50489784 -95099504 - MLT1B LTR MaLR 0 390 330 428 167 0 14 chr10 50489785 50489857 -95099431 - MER1A DNA MER1_type -6 527 457 2189 129 80 6 chr10 50489871 50490250 -95099038 - LTR12 LTR ERV1 -234 1683 100 258 189 0 19 chr10 50490250 50490303 -95098985 - LTR30 LTR ERV1 -670 52 1 2558 86 59 11 chr10 50490303 50490674 -95098614 - MER1A DNA MER1_type -80 449 61 8409 50 0 0 chr10 50490856 50491961 -95097327 + L1P LINE L1 2114 3218 -2928 6069 128 11 14 chr10 50492111 50493104 -95096184 + HSMAR2 DNA Mariner 312 1301 -1 2398 125 14 5 chr10 50493856 50494289 -95094999 + L1PA15-16 LINE L1 1880 2316 -4533 3183 201 36 20 chr10 50494294 50495407 -95093881 + L1PA15-16 LINE L1 2372 3520 -3329 4968 25 2 0 chr10 50495557 50496157 -95093131 - L1P LINE L1 -1574 4572 3972 4563 34 0 0 chr10 50496153 50496710 -95092578 + L1PA5 LINE L1 5301 5857 -297 * 2745 181 19 6 chr10 50496891 50497509 -95091779 + L1MA9 LINE L1 5580 6302 -10 1520 138 0 4 chr10 50497885 50498116 -95091172 + AluSq SINE Alu 82 311 -2 22 35 0 0 chr10 50498843 50498872 -95090416 + AT_rich Low_complexity Low_complexity 1 29 0 371 317 81 16 chr10 50499516 50499702 -95089586 - MIR SINE MIR -11 251 54 1290 216 69 45 chr10 50505479 50506043 -95083245 - LTR48 LTR ERV1 -7 771 14 327 289 76 76 chr10 50507478 50507602 -95081686 - L3 LINE CR1 -57 1520 1394 2221 123 3 0 chr10 50507602 50507902 -95081386 + AluSx SINE Alu 1 301 -11 327 289 76 76 chr10 50507902 50507988 -95081300 - L3 LINE CR1 -182 1395 1310 285 274 24 0 chr10 50508125 50508209 -95081079 - MER5A DNA MER1_type -103 86 1 * 381 293 30 10 chr10 50508209 50508385 -95080903 + MIR SINE MIR 12 189 -62 327 312 64 0 chr10 50509009 50509118 -95080170 + L2 LINE L2 3137 3252 -20 267 180 11 45 chr10 50509118 50509207 -95080081 + GA-rich Low_complexity Low_complexity 4 89 0 4212 138 5 3 chr10 50510217 50510884 -95078404 + LTR39 LTR ERV1 36 703 -80 2524 195 18 23 chr10 50511013 50511577 -95077711 + L1MA10 LINE L1 5774 6334 0 809 191 69 39 chr10 50511581 50511785 -95077503 + MLT2D LTR ERVL 205 414 0 1997 153 46 3 chr10 50512303 50512675 -95076613 - L1MB2 LINE L1 -1 6170 5783 401 237 0 29 chr10 50512676 50512792 -95076496 - L1MC4 LINE L1 -1339 6703 6614 1926 156 3 31 chr10 50512792 50513151 -95076137 - L1M3 LINE L1 -380 5791 5443 798 97 15 24 chr10 50513702 50513843 -95075445 + L1M3 LINE L1 5398 5544 -630 236 329 20 34 chr10 50514360 50514506 -95074782 + MLT1H1 LTR MaLR 162 305 -285 1941 128 24 7 chr10 50514561 50514851 -95074437 - AluSx SINE Alu -1 311 17 2153 138 64 20 chr10 50514853 50515245 -95074043 - MSTA LTR MaLR -19 409 1 439 208 2 71 chr10 50515296 50515427 -95073861 + MLT1H1 LTR MaLR 428 554 -1 376 351 11 67 chr10 50516291 50516559 -95072729 + L2 LINE L2 3005 3257 -15 1762 168 83 32 chr10 50517816 50518190 -95071098 + MSTD LTR MaLR 2 394 -2 3483 257 73 88 chr10 50518560 50519115 -95070173 + L1MEc LINE L1 125 687 -5709 599 209 139 0 chr10 50519115 50519287 -95070001 - MER3 DNA MER1_type 0 209 14 3483 257 73 88 chr10 50519287 50519889 -95069399 + L1MEc LINE L1 687 1296 -5100 2389 142 48 19 chr10 50519889 50520265 -95069023 + MSTA LTR MaLR 1 392 -36 2972 13 0 0 chr10 50520265 50520582 -95068706 - AluYb8 SINE Alu -1 317 1 2389 142 48 19 chr10 50520582 50520621 -95068667 + MSTA LTR MaLR 392 428 0 3483 257 73 88 chr10 50520621 50521700 -95067588 + L1MEc LINE L1 1296 2497 -3899 1352 223 22 3 chr10 50521723 50521800 -95067488 + L1MEc LINE L1 2529 2603 -3612 2330 148 35 46 chr10 50521800 50521842 -95067446 - MSTA LTR MaLR 0 428 387 2193 136 0 16 chr10 50521842 50522159 -95067129 + AluSx SINE Alu 1 312 0 2330 148 35 46 chr10 50522159 50522549 -95066739 - MSTA LTR MaLR -41 387 1 1352 223 22 3 chr10 50522549 50522834 -95066454 + L1MEc LINE L1 2603 2898 -3317 2550 217 35 10 chr10 50522838 50523418 -95065870 + L1M1 LINE L1 15 608 -6957 10397 202 20 6 chr10 50523421 50526355 -95062933 + L1M1 LINE L1 3825 6859 -743 558 128 0 0 chr10 50526356 50526434 -95062854 + AluS SINE Alu 2 79 -233 1142 162 132 0 chr10 50526592 50526827 -95062461 - L1M3 LINE L1 -534 5637 5372 528 181 9 0 chr10 50527307 50527412 -95061876 - L1MB3 LINE L1 -339 5844 5739 236 312 230 6 chr10 50527560 50527890 -95061398 - Tigger8 DNA MER2_type -209 457 54 423 323 35 30 chr10 50528143 50528344 -95060944 - MIR SINE MIR -3 259 58 180 97 0 0 chr10 50530470 50530501 -95058787 + (TCCC)n Simple_repeat Simple_repeat 4 34 0 1213 219 147 44 chr10 50530575 50531065 -95058223 + MLT1F1 LTR MaLR 1 555 -12 200 253 158 32 chr10 50532433 50532528 -95056760 + MIR SINE MIR 47 153 -109 449 216 28 42 chr10 50532775 50532926 -95056362 - MLT1F LTR MaLR 0 590 394 266 164 50 46 chr10 50532999 50533089 -95056199 - MLT1F LTR MaLR -273 322 215 221 149 0 64 chr10 50533943 50533990 -95055298 + (TCCC)n Simple_repeat Simple_repeat 2 45 0 486 238 46 121 chr10 50533994 50534150 -95055138 - L2 LINE L2 -9 3304 3177 2391 150 53 7 chr10 50534150 50534563 -95054725 + MSTB1 LTR MaLR 1 432 0 486 238 46 121 chr10 50534563 50534687 -95054601 - L2 LINE L2 -136 3177 3045 660 262 145 14 chr10 50535370 50535584 -95053704 - MIR SINE MIR -8 254 13 543 234 35 12 chr10 50535777 50535948 -95053340 + MLT1F LTR MaLR 368 542 0 237 312 11 11 chr10 50535986 50536079 -95053209 - L1MB3 LINE L1 -2467 5528 5436 1111 207 121 75 chr10 50537223 50537493 -95051795 - MLT1C LTR MaLR -8 459 160 1589 220 0 0 chr10 50537493 50537766 -95051522 - AluJb SINE Alu -39 273 1 1111 207 121 75 chr10 50537766 50537934 -95051354 - MLT1C LTR MaLR -307 160 1 2044 156 0 0 chr10 50539266 50539561 -95049727 - AluSx SINE Alu -17 295 1 21 0 0 0 chr10 50540103 50540124 -95049164 + AT_rich Low_complexity Low_complexity 1 21 0 489 278 104 93 chr10 50541924 50542355 -95046933 + L2 LINE L2 2835 3270 -2 765 184 25 12 chr10 50544327 50544490 -95044798 + MER53 DNA DNA 1 165 -24 375 23 0 0 chr10 50544515 50544559 -95044729 + (CAT)n Simple_repeat Simple_repeat 3 46 0 357 299 18 60 chr10 50544715 50544897 -95044391 - MIR SINE MIR -65 143 20 1345 196 43 69 chr10 50545799 50546145 -95043143 - MLT1A1 LTR MaLR -28 337 1 332 330 37 0 chr10 50546576 50546685 -95042603 - L2 LINE L2 0 3272 3160 294 150 83 17 chr10 50547595 50547655 -95041633 + MER63 DNA MER1_type 18 707 -129 284 279 103 29 chr10 50549301 50549505 -95039783 + MER112 DNA MER1_type 35 253 -7 193 294 65 33 chr10 50549859 50549951 -95039337 - MIR SINE MIR -56 206 112 467 229 67 0 chr10 50550960 50551065 -95038223 - MIR SINE MIR -121 141 30 407 241 194 10 chr10 50552290 50552487 -95036801 - MIR SINE MIR -20 242 9 299 310 131 6 chr10 50552670 50552835 -95036453 + MIR SINE MIR 17 200 -57 22 35 0 0 chr10 50554855 50554884 -95034404 + AT_rich Low_complexity Low_complexity 1 29 0 765 204 117 0 chr10 50554913 50555075 -95034213 - MER58A DNA MER1_type 0 224 44 301 316 32 0 chr10 50557597 50557692 -95031596 + MIR SINE MIR 53 150 -112 239 221 15 118 chr10 50557758 50557894 -95031394 + MER113 DNA MER1_type? 5 126 -395 213 260 41 27 chr10 50559344 50559417 -95029871 - MIR SINE MIR 0 262 189 376 259 161 29 chr10 50559519 50559737 -95029551 - MIR SINE MIR -11 251 14 993 234 53 50 chr10 50560428 50560765 -95028523 - MER58B DNA MER1_type -3 338 1 1424 199 42 3 chr10 50560779 50561085 -95028203 + MER33 DNA MER1_type 7 324 0 331 299 88 9 chr10 50561420 50561580 -95027708 - MIR SINE MIR -62 146 20 695 269 45 53 chr10 50561897 50562273 -95027015 + L2 LINE L2 2864 3236 -77 725 182 0 0 chr10 50562336 50562468 -95026820 - MER5A DNA MER1_type -51 138 7 443 275 135 22 chr10 50562576 50562755 -95026533 - MIR SINE MIR -6 256 56 353 274 258 0 chr10 50562999 50563123 -95026165 + MIR SINE MIR 59 214 -48 344 284 188 48 chr10 50563280 50563678 -95025610 + L1MC4a LINE L1 5778 6231 -1577 1686 158 94 0 chr10 50563866 50564164 -95025124 - LTR47A LTR ERVL -96 356 31 1506 246 148 75 chr10 50564166 50565440 -95023848 + L1MC5 LINE L1 6451 7822 -139 511 274 106 8 chr10 50567250 50567495 -95021793 + MER102a DNA MER1_type 59 327 -3 204 167 0 0 chr10 50567957 50567993 -95021295 - L2 LINE L2 -16 3297 3262 185 263 200 0 chr10 50568380 50568460 -95020828 - L2 LINE L2 -16 3256 3161 1675 170 0 35 chr10 50568964 50569281 -95020007 - AluJo SINE Alu -6 306 1 4296 146 43 12 chr10 50569361 50569412 -95019876 - L1MB2 LINE L1 -1 6170 6122 2091 113 3 3 chr10 50569412 50569721 -95019567 - AluSx SINE Alu -3 309 1 4296 146 43 12 chr10 50569721 50570430 -95018858 - L1MB2 LINE L1 -49 6122 5386 204 330 0 50 chr10 50570669 50570769 -95018519 - MER5B DNA MER1_type -69 109 15 339 299 31 0 chr10 50571126 50571223 -95018065 - MER5A DNA MER1_type -29 160 61 626 177 115 0 chr10 50571415 50571545 -95017743 + MER5A DNA MER1_type 2 146 -43 292 320 32 8 chr10 50571604 50571729 -95017559 - MIR SINE MIR -58 150 23 451 279 0 0 chr10 50572392 50572496 -95016792 + MIR SINE MIR 48 151 -111 279 203 0 0 chr10 50572974 50573053 -95016235 + (TG)n Simple_repeat Simple_repeat 1 79 0 689 138 8 39 chr10 50574189 50574319 -95014969 + L1MC1 LINE L1 6208 6333 0 341 217 99 81 chr10 50574357 50574489 -95014799 - L1ME4a LINE L1 -161 5960 5823 2050 122 3 0 chr10 50574489 50574784 -95014504 - AluSg SINE Alu -14 296 1 341 217 99 81 chr10 50574784 50574812 -95014476 - L1ME4a LINE L1 -298 5823 5797 360 279 159 26 chr10 50574845 50575078 -95014210 - L1ME4a LINE L1 -402 5719 5456 207 340 39 10 chr10 50575355 50575458 -95013830 + MIR SINE MIR 47 152 -110 255 162 59 88 chr10 50576069 50576137 -95013151 + MIR SINE MIR 84 149 -113 214 252 83 15 chr10 50577105 50577209 -95012079 + MIR SINE MIR 69 179 -58 204 273 0 0 chr10 50577696 50577740 -95011548 - MER91 DNA MER1_type -81 59 16 355 274 113 0 chr10 50577946 50578052 -95011236 - L2 LINE L2 0 3313 3196 484 62 0 0 chr10 50578343 50578433 -95010855 - L1PA5 LINE L1 0 6154 6088 362 267 0 11 chr10 50578622 50578712 -95010576 - MIR SINE MIR -29 233 145 245 277 57 107 chr10 50580220 50580397 -95008891 + MIR SINE MIR 25 192 -70 1713 103 11 39 chr10 50580599 50580881 -95008407 - AluSx SINE Alu -4 308 35 422 248 92 0 chr10 50580939 50581083 -95008205 - MLT1C LTR MaLR -57 410 276 337 327 72 13 chr10 50581086 50581239 -95008049 - L1ME4a LINE L1 -237 5818 5657 1075 228 151 14 chr10 50581303 50581667 -95007621 - MLT1D LTR MaLR 0 505 92 622 210 45 38 chr10 50581674 50581831 -95007457 - MIR SINE MIR -51 211 54 941 246 175 44 chr10 50582960 50583395 -95005893 - MLT1D LTR MaLR -4 501 10 236 292 69 23 chr10 50583949 50584079 -95005209 + MIR SINE MIR 121 256 -6 236 246 0 33 chr10 50584459 50584520 -95004768 + C-rich Low_complexity Low_complexity 4 62 0 199 250 33 0 chr10 50584585 50584645 -95004643 - L2 LINE L2 -25 3288 3227 412 216 186 0 chr10 50584686 50584788 -95004500 + MIR SINE MIR 21 141 -121 251 254 98 49 chr10 50585009 50585131 -95004157 + L2 LINE L2 3145 3272 0 459 258 0 0 chr10 50585131 50585286 -95004002 + (TGGA)n Simple_repeat Simple_repeat 2 156 0 6282 239 52 17 chr10 50585963 50586765 -95002523 - L1ME4a LINE L1 -669 5624 4852 1969 146 104 11 chr10 50586765 50587122 -95002166 + MLT1B LTR MaLR 1 390 0 6282 239 52 17 chr10 50587122 50588000 -95001288 - L1ME4a LINE L1 -1441 4852 3833 2136 89 0 14 chr10 50588000 50588293 -95000995 - AluY SINE Alu -15 296 8 6282 239 52 17 chr10 50588293 50588920 -95000368 - L1ME4a LINE L1 -2460 3833 3230 1097 141 10 15 chr10 50589562 50589760 -94999528 - MER63 DNA MER1_type -1 1059 863 501 227 16 16 chr10 50589763 50589891 -94999397 - MER63 DNA MER1_type -308 754 1 3312 151 89 5 chr10 50590083 50590699 -94998589 - LTR51 LTR ERV1 -3 668 1 213 353 15 0 chr10 50590777 50590845 -94998443 - MIR SINE MIR -59 149 81 320 350 93 40 chr10 50590953 50591179 -94998109 + L1ME LINE L1 5535 5772 -349 734 188 6 44 chr10 50591189 50591349 -94997939 + MER5A DNA MER1_type 35 188 -1 2106 123 3 0 chr10 50594528 50594838 -94994450 - AluSq SINE Alu 0 313 3 724 286 144 30 chr10 50594975 50595314 -94993974 - L2 LINE L2 -11 3302 2925 586 217 105 69 chr10 50595315 50595647 -94993641 - L1ME4a LINE L1 -5186 884 541 325 170 0 0 chr10 50595647 50595700 -94993588 + MER74B LTR ERVL 1 53 -569 911 123 96 0 chr10 50595772 50595918 -94993370 + AluSx SINE Alu 1 160 -152 350 188 101 0 chr10 50595921 50595990 -94993298 + FLAM SINE Alu 56 131 -2 1346 226 65 24 chr10 50596026 50596398 -94992890 + MER74B LTR ERVL 226 612 -10 303 100 0 0 chr10 50596561 50596601 -94992687 - MLT2C1 LTR ERVL -8 389 350 243 218 0 0 chr10 50596606 50596661 -94992627 + (TATATG)n Simple_repeat Simple_repeat 2 56 0 1584 207 53 22 chr10 50596663 50597031 -94992257 - MLT2D LTR ERVL -40 480 1 382 293 10 110 chr10 50597052 50597342 -94991946 - L1ME4a LINE L1 -5543 527 267 306 344 67 54 chr10 50597438 50597662 -94991626 - HAL1 LINE L1 -1130 1377 1151 528 271 104 36 chr10 50598112 50598333 -94990955 - MIR SINE MIR -10 252 17 2202 180 20 2 chr10 50599365 50599771 -94989517 + L1MC3 LINE L1 7373 7785 0 1514 183 37 3 chr10 50599781 50600076 -94989212 + AluJb SINE Alu 1 305 -7 645 291 37 3 chr10 50600176 50600371 -94988917 - MIR SINE MIR 0 262 64 233 317 37 75 chr10 50600789 50600950 -94988338 - L3 LINE CR1 -14 1563 1409 523 286 79 47 chr10 50605101 50605779 -94983509 + L1P LINE L1 3914 4608 -1538 2531 260 103 68 chr10 50606544 50608430 -94980858 + L1MC4 LINE L1 5966 8036 -6 238 260 20 0 chr10 50609822 50609922 -94979366 + (CA)n Simple_repeat Simple_repeat 1 102 0 229 186 0 0 chr10 50610798 50610841 -94978447 + (TG)n Simple_repeat Simple_repeat 2 44 0 252 0 0 0 chr10 50610841 50610869 -94978419 + (GA)n Simple_repeat Simple_repeat 1 28 0 488 246 25 8 chr10 50611042 50611164 -94978124 - MER94 DNA DNA 0 134 11 202 208 21 0 chr10 50611227 50611275 -94978013 + GA-rich Low_complexity Low_complexity 1 49 0 196 272 218 50 chr10 50611615 50611817 -94977471 + L2 LINE L2 2249 2484 -830 1054 294 100 26 chr10 50612503 50613056 -94976232 - L2 LINE L2 0 3313 2712 203 248 9 0 chr10 50614133 50614238 -94975050 + GA-rich Low_complexity Low_complexity 2 107 0 198 331 97 16 chr10 50614858 50614982 -94974306 - L2 LINE L2 -1 3271 3138 182 270 27 14 chr10 50616017 50616091 -94973197 - MIR SINE MIR 0 262 188 214 270 32 16 chr10 50616138 50616201 -94973087 + L2 LINE L2 3249 3312 -1 257 242 0 8 chr10 50616314 50616438 -94972850 + (CA)n Simple_repeat Simple_repeat 2 124 0 576 218 0 0 chr10 50616479 50616658 -94972630 + (CA)n Simple_repeat Simple_repeat 2 180 0 238 188 68 143 chr10 50617111 50617244 -94972044 - L1ME LINE L1 -294 5827 5705 2471 209 132 0 chr10 50617245 50617837 -94971451 + L1MD2 LINE L1 5680 6349 -10 337 243 97 0 chr10 50617971 50618074 -94971214 - L1ME LINE L1 -463 5658 5546 228 293 73 0 chr10 50618246 50618328 -94970960 - L1ME LINE L1 -648 5473 5386 31 0 0 0 chr10 50618603 50618634 -94970654 + AT_rich Low_complexity Low_complexity 1 31 0 2313 43 0 0 chr10 50618634 50618910 -94970378 - L1PA3 LINE L1 -1 6154 5879 36256 36 31 2 chr10 50619010 50623466 -94965822 - L1PA3 LINE L1 -945 5201 617 791 71 0 0 chr10 50623460 50623558 -94965730 - L1PA3 LINE L1 -6048 98 1 * 815 339 87 51 chr10 50623667 50624659 -94964629 - L1ME LINE L1 -1228 4918 3892 270 286 60 51 chr10 50624713 50624780 -94964508 - L1ME LINE L1 -2339 3807 3742 727 241 99 0 chr10 50624780 50624942 -94964346 - MER45A DNA AcHobo 0 178 1 270 286 60 51 chr10 50624942 50625091 -94964197 - L1ME LINE L1 -2404 3742 3589 470 325 67 67 chr10 50625596 50626042 -94963246 - L1ME LINE L1 -2963 3183 2738 193 295 162 17 chr10 50628763 50628936 -94960352 + MIR SINE MIR 49 246 -16 393 294 52 7 chr10 50629195 50629331 -94959957 - L2 LINE L2 -1 3312 3171 234 295 33 0 chr10 50630291 50630352 -94958936 - MIR3 SINE MIR -3 205 143 2154 76 41 3 chr10 50630785 50631076 -94958212 + AluY SINE Alu 1 302 -9 514 312 32 0 chr10 50631160 50631349 -94957939 - LTR67 LTR ERVL -9 548 354 233 220 34 17 chr10 50631514 50631573 -94957715 - LTR67 LTR ERVL -400 157 98 918 251 35 42 chr10 50632171 50632454 -94956834 - MLT1J2 LTR MaLR -132 318 38 420 254 106 0 chr10 50633616 50633758 -94955530 + L1ME4a LINE L1 5514 5670 -451 2315 143 11 3 chr10 50634118 50634481 -94954807 + MER47A DNA MER2_type 1 366 0 27 62 0 0 chr10 50634491 50634539 -94954749 + AT_rich Low_complexity Low_complexity 1 48 0 5879 185 106 88 chr10 50634608 50634942 -94954346 - L1PB3 LINE L1 0 6154 5828 765 190 70 13 chr10 50634942 50635100 -94954188 + MER45A DNA AcHobo 12 178 0 5879 185 106 88 chr10 50635100 50636322 -94952966 - L1PB3 LINE L1 -326 5828 6225 207 0 0 0 chr10 50636322 50636345 -94952943 + (TG)n Simple_repeat Simple_repeat 2 24 0 5879 185 106 88 chr10 50636345 50637604 -94951684 - L1PB3 LINE L1 72 6226 4991 231 282 103 8 chr10 50637609 50637726 -94951562 - L1MC4a LINE L1 -1238 6570 6443 313 279 88 33 chr10 50637876 50638307 -94950981 - L1MC5 LINE L1 -302 7659 7260 265 315 74 27 chr10 50638799 50639056 -94950232 + L1ME4a LINE L1 5675 5943 -227 341 288 128 0 chr10 50639244 50639369 -94949919 + L1ME4a LINE L1 5940 6080 -41 214 329 13 0 chr10 50640767 50640846 -94948442 + (CACG)n Simple_repeat Simple_repeat 4 83 0 415 314 133 36 chr10 50642742 50643246 -94946042 + L2 LINE L2 1721 2273 -1041 21 57 0 0 chr10 50643531 50643566 -94945722 + AT_rich Low_complexity Low_complexity 1 35 0 1625 168 40 67 chr10 50644810 50645101 -94944187 + MER47A DNA MER2_type 2 282 -2041 1676 175 0 3 chr10 50645101 50645392 -94943896 - AluSx SINE Alu -22 290 1 1625 168 40 67 chr10 50645392 50645475 -94943813 + MER47A DNA MER2_type 282 366 0 819 115 0 62 chr10 50645508 50645638 -94943650 + MSTB LTR MaLR 305 426 0 9274 173 31 5 chr10 50645638 50647247 -94942041 + MSTB-int LTR MaLR 1 1651 0 2600 147 19 23 chr10 50647247 50647675 -94941613 + MSTB LTR MaLR 1 426 0 209 207 121 78 chr10 50647869 50647985 -94941303 - MIR3 SINE MIR -7 201 81 515 265 60 16 chr10 50648826 50649011 -94940277 + MIR SINE MIR 49 241 -21 212 331 57 40 chr10 50649040 50649164 -94940124 + MIR SINE MIR 18 143 -119 192 77 0 0 chr10 50649442 50649468 -94939820 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 892 280 105 104 chr10 50649547 50650783 -94938505 - L2 LINE L2 -531 2783 1546 325 264 203 25 chr10 50651903 50652066 -94937222 + LTR33 LTR ERVL 1 192 -329 332 292 22 36 chr10 50652187 50652324 -94936964 - L1MEc LINE L1 -3476 2739 2605 188 0 74 0 chr10 50652349 50652376 -94936912 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 516 163 0 174 chr10 50652470 50652523 -94936765 + AluJb SINE Alu 72 133 -179 330 26 0 0 chr10 50652523 50652562 -94936726 + (CA)n Simple_repeat Simple_repeat 1 39 0 516 163 0 174 chr10 50652562 50652686 -94936602 + AluJb SINE Alu 133 218 -94 539 140 0 70 chr10 50652833 50652947 -94936341 + AluJb SINE Alu 157 262 -50 530 252 88 9 chr10 50652947 50653173 -94936115 - L1MEc LINE L1 -3621 2594 2351 2354 126 17 111 chr10 50653192 50653723 -94935565 - L1MC1 LINE L1 -13 6320 5840 948 278 126 51 chr10 50653753 50654672 -94934616 - L1MEc LINE L1 -4036 2360 1373 1900 184 19 22 chr10 50654913 50655278 -94934010 + MLT1A1 LTR MaLR 2 365 0 533 224 50 142 chr10 50655387 50655668 -94933620 + MIR SINE MIR 7 261 -1 230 304 143 9 chr10 50656276 50656388 -94932900 + MIR SINE MIR 6 132 -130 1006 121 0 22 chr10 50656974 50657156 -94932132 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 609 90 0 0 chr10 50657256 50657345 -94931943 + (TTTC)n Simple_repeat Simple_repeat 3 91 0 294 29 0 0 chr10 50657356 50657391 -94931897 + (TCCC)n Simple_repeat Simple_repeat 4 38 0 735 135 0 9 chr10 50657399 50657510 -94931778 - AluSg/x SINE Alu -33 277 168 201 170 0 43 chr10 50658049 50658096 -94931192 + CT-rich Low_complexity Low_complexity 4 48 0 1079 225 8 8 chr10 50658619 50658855 -94930433 - AluJo SINE Alu -76 236 1 290 277 40 10 chr10 50658881 50658982 -94930306 + MARNA DNA Mariner 263 366 -220 2110 121 0 0 chr10 50660035 50660315 -94928973 + AluSq SINE Alu 1 280 -33 540 0 0 0 chr10 50660315 50660375 -94928913 + (TAAAA)n Simple_repeat Simple_repeat 5 64 0 417 283 7 21 chr10 50661301 50661446 -94927842 - MIR SINE MIR -105 157 15 268 313 36 9 chr10 50662404 50662516 -94926772 - L1ME4a LINE L1 -40 6081 5967 400 300 39 8 chr10 50662917 50663047 -94926241 - L2 LINE L2 -2 3270 3137 270 0 0 0 chr10 50663759 50663789 -94925499 + (T)n Simple_repeat Simple_repeat 1 30 0 22 35 0 0 chr10 50665122 50665151 -94924137 + AT_rich Low_complexity Low_complexity 1 29 0 495 282 78 20 chr10 50665920 50666175 -94923113 + L1MCa LINE L1 1259 1528 -4898 954 265 147 50 chr10 50666264 50666705 -94922583 + MER69 DNA AcHobo 103 586 -1940 * 1504 196 128 9 chr10 50666689 50667149 -94922139 + MER69 DNA AcHobo 2012 2526 0 28 71 0 0 chr10 50667210 50667266 -94922022 + AT_rich Low_complexity Low_complexity 1 56 0 252 274 68 8 chr10 50667362 50667479 -94921809 + L1MCa LINE L1 1729 1852 -4574 310 327 63 22 chr10 50667591 50668053 -94921235 - L1M4 LINE L1 -1489 4657 4177 434 300 132 21 chr10 50668082 50668781 -94920507 - L1M4 LINE L1 -2199 3947 3172 471 250 68 14 chr10 50668786 50668934 -94920354 + MLT1J LTR MaLR 32 187 -324 337 276 121 9 chr10 50668943 50669175 -94920113 - L1M4 LINE L1 -3463 2683 2426 28 71 0 0 chr10 50669397 50669453 -94919835 + AT_rich Low_complexity Low_complexity 1 56 0 1842 243 127 18 chr10 50669520 50669996 -94919292 - L1ME3A LINE L1 -23 6147 5577 360 43 0 0 chr10 50669996 50670042 -94919246 + (TG)n Simple_repeat Simple_repeat 2 47 0 1842 243 127 18 chr10 50670042 50670227 -94919061 - L1ME3A LINE L1 -593 5577 5414 665 241 38 62 chr10 50670335 50670626 -94918662 - L1ME3A LINE L1 -808 5338 5055 23 68 0 0 chr10 50670634 50670678 -94918610 + AT_rich Low_complexity Low_complexity 1 44 0 270 278 116 28 chr10 50671235 50671451 -94917837 - HAL1 LINE L1 -846 1661 1427 1872 103 0 4 chr10 50671646 50671898 -94917390 - AluSg SINE Alu -6 304 54 358 210 389 0 chr10 50673103 50673265 -94916023 - MIR SINE MIR -26 236 12 3443 59 31 9 chr10 50673490 50673934 -94915354 - L1PA5 LINE L1 -2 6152 5699 2747 87 19 5 chr10 50674953 50675323 -94913965 + THE1C LTR MaLR 1 375 0 241 325 32 32 chr10 50675584 50675710 -94913578 - L1ME LINE L1 -401 5720 5595 321 219 16 0 chr10 50675870 50675934 -94913354 + MER94 DNA DNA 37 101 -33 825 309 104 14 chr10 50676171 50676682 -94912606 - L1ME3A LINE L1 -220 6344 5788 238 326 81 17 chr10 50676677 50676849 -94912439 - L1ME3A LINE L1 -1545 4995 4813 * 30 59 0 0 chr10 50676871 50676922 -94912366 + AT_rich Low_complexity Low_complexity 1 51 0 1067 284 92 38 chr10 50677052 50677569 -94911719 - L1ME3A LINE L1 -1772 4768 4280 336 24 0 0 chr10 50677569 50677610 -94911678 + (TC)n Simple_repeat Simple_repeat 2 42 0 * 441 0 0 0 chr10 50677609 50677658 -94911630 + (TA)n Simple_repeat Simple_repeat 1 49 0 1067 284 92 38 chr10 50677610 50678736 -94910552 - L1ME3A LINE L1 -2260 4280 3045 1156 71 0 0 chr10 50679109 50679249 -94910039 - AluSp/q SINE Alu -9 304 165 219 227 30 30 chr10 50679258 50679324 -94909964 - L2 LINE L2 0 3272 3207 351 301 84 30 chr10 50679840 50680043 -94909245 + Charlie8 DNA MER1_type 285 498 -1919 220 223 42 13 chr10 50680261 50680340 -94908948 + MIR SINE MIR 24 104 -104 1611 266 25 2 chr10 50680651 50681098 -94908190 + Charlie4a DNA MER1_type 36 492 -16 201 108 0 0 chr10 50682251 50682288 -94907000 + (GA)n Simple_repeat Simple_repeat 2 38 0 312 322 51 0 chr10 50682961 50683079 -94906209 - MIR SINE MIR -12 250 127 1378 211 101 6 chr10 50683318 50683672 -94905616 + MLT1D LTR MaLR 113 567 0 364 279 25 70 chr10 50683992 50684150 -94905138 - L1ME3A LINE L1 -6217 323 173 596 299 125 12 chr10 50684159 50684494 -94904794 - HAL1 LINE L1 -608 1899 1527 1298 138 9 42 chr10 50684559 50684776 -94904512 - AluJb SINE Alu -17 295 86 1050 263 28 16 chr10 50684820 50685208 -94904080 - L1M4 LINE L1 -1353 4793 4401 1203 289 36 12 chr10 50687294 50687712 -94901576 - LTR16A LTR ERVL -5 445 18 525 193 50 94 chr10 50688030 50688211 -94901077 - MLT1J LTR MaLR -100 411 239 189 313 25 0 chr10 50689032 50689112 -94900176 - MIR3 SINE MIR -42 166 85 242 214 0 36 chr10 50689631 50689687 -94899601 - MLT1I LTR MaLR -14 395 342 712 231 83 59 chr10 50689770 50690107 -94899181 - MLT1J LTR MaLR -166 345 1 1459 194 123 54 chr10 50690881 50691346 -94897942 + LTR54B LTR ERV1 1 497 -1 336 223 140 108 chr10 50692122 50692279 -94897009 + MER96 DNA MER1_type? 1 162 -13 189 291 47 12 chr10 50692733 50692819 -94896469 + MER5A DNA MER1_type 85 173 -16 * 327 236 14 0 chr10 50692757 50692829 -94896459 - MER5A DNA MER1_type -98 91 19 228 263 211 18 chr10 50693029 50693143 -94896145 - LTR16A1 LTR ERVL -3 454 319 186 103 0 0 chr10 50693443 50693472 -94895816 + (GA)n Simple_repeat Simple_repeat 2 30 0 259 229 0 0 chr10 50693658 50693728 -94895560 + (CA)n Simple_repeat Simple_repeat 1 70 0 244 283 228 14 chr10 50694438 50694583 -94894705 - L1MC/D LINE L1 -2213 5595 5420 317 256 196 18 chr10 50694697 50695131 -94894157 - L1MC/D LINE L1 -847 5299 4789 429 271 131 44 chr10 50695340 50695569 -94893719 - MIR SINE MIR -12 250 2 1059 244 58 84 chr10 50695635 50695776 -94893512 - L1MC4 LINE L1 0 8042 7899 225 0 0 0 chr10 50695776 50695801 -94893487 + (CA)n Simple_repeat Simple_repeat 2 26 0 1059 244 58 84 chr10 50695801 50696309 -94892979 - L1MC4 LINE L1 -143 7899 7323 3792 233 65 53 chr10 50697110 50699630 -94889658 - L1MDa LINE L1 -814 5726 17 255 79 53 0 chr10 50702213 50702251 -94887037 + MER115 DNA AcHobo 599 638 -55 181 300 56 33 chr10 50705626 50705716 -94883572 - L2 LINE L2 -258 3014 2923 566 329 116 10 chr10 50705853 50706257 -94883031 - MLT1K LTR MaLR -8 580 134 1073 169 0 0 chr10 50910061 50910766 -94678522 + ACRO1 Satellite acromeric 1 705 -55 738 201 40 118 chr10 50911456 50911785 -94677503 - L1MB8 LINE L1 -36 6142 5840 723 92 0 0 chr10 50911838 50911947 -94677341 + (TTCC)n Simple_repeat Simple_repeat 4 112 0 235 186 0 0 chr10 50912249 50912292 -94676996 - Tigger5 DNA MER2_type -2268 55 13 1836 93 71 0 chr10 50912690 50912958 -94676330 + L1PA10 LINE L1 5863 6149 -19 186 103 0 0 chr10 50912958 50912987 -94676301 + (CGAAA)n Simple_repeat Simple_repeat 2 30 0 819 230 78 12 chr10 50913163 50913549 -94675739 - MER21B LTR ERV1 -132 799 276 30 89 0 0 chr10 50913718 50913797 -94675491 + AT_rich Low_complexity Low_complexity 1 79 0 754 127 3 0 chr10 50914033 50917533 -94671755 - CER Satellite Satellite 0 3509 1 245 180 10 160 chr10 50917880 50917980 -94671308 + HSAT5 Satellite Satellite 1 85 -1 614 152 0 52 chr10 50917996 50918182 -94671106 + HSAT5 Satellite Satellite 1 176 0 299 215 0 19 chr10 50918343 50918427 -94670861 + HSAT5 Satellite Satellite 1 151 -3 228 235 24 35 chr10 50918643 50918744 -94670544 + HSAT5 Satellite Satellite 1 99 -1 885 261 7 39 chr10 50918750 50919033 -94670255 - MSTA LTR MaLR -154 274 1 1252 175 8 12 chr10 50919033 50919285 -94670003 - MSTA-int LTR MaLR 0 1651 1401 * 1288 181 0 0 chr10 50919282 50919520 -94669768 - MSTA-int LTR MaLR -1401 250 13 1486 222 52 3 chr10 50919549 50919892 -94669396 - MSTA LTR MaLR -60 368 9 260 237 118 0 chr10 50921153 50921229 -94668059 - MER5A DNA MER1_type -6 183 99 426 20 0 0 chr10 50921643 50921694 -94667594 + (TCTG)n Simple_repeat Simple_repeat 2 52 0 416 91 15 0 chr10 50921736 50921802 -94667486 + (CA)n Simple_repeat Simple_repeat 1 67 0 609 198 0 0 chr10 50922223 50922479 -94666809 + ACRO1 Satellite acromeric 1 256 -38 1089 138 3 0 chr10 50922811 50924366 -94664922 + ACRO1 Satellite acromeric 1 1559 -55 738 201 40 118 chr10 50925055 50925384 -94663904 - L1MB8 LINE L1 -36 6142 5840 642 68 0 0 chr10 50925442 50925530 -94663758 + (TTCC)n Simple_repeat Simple_repeat 4 91 0 231 273 0 0 chr10 50925832 50925887 -94663401 - Tigger5 DNA MER2_type -2268 55 1 1756 110 65 10 chr10 50926273 50926563 -94662725 + L1PA10 LINE L1 5863 6168 0 1481 226 161 7 chr10 50926745 50927206 -94662082 - MER21B LTR ERV1 -133 730 199 234 281 31 0 chr10 50927458 50927522 -94661766 - MER5A DNA MER1_type -6 183 118 245 27 54 0 chr10 50927951 50927988 -94661300 + (TCTG)n Simple_repeat Simple_repeat 2 40 0 383 106 15 0 chr10 50928030 50928096 -94661192 + (CA)n Simple_repeat Simple_repeat 1 67 0 614 197 0 0 chr10 50928517 50928773 -94660515 + ACRO1 Satellite acromeric 1 256 -38 914 150 3 2 chr10 50929105 50929727 -94659561 + ACRO1 Satellite acromeric 1 622 -39 422 88 15 0 chr10 50930168 50930236 -94659052 + (TG)n Simple_repeat Simple_repeat 1 69 0 282 29 0 0 chr10 50930278 50930313 -94658975 + (CAGA)n Simple_repeat Simple_repeat 2 36 0 241 250 118 0 chr10 50930730 50930806 -94658482 + MER5A DNA MER1_type 99 183 -6 1495 226 161 7 chr10 50931058 50931519 -94657769 + MER21B LTR ERV1 199 730 -133 1824 112 66 0 chr10 50931705 50931992 -94657296 - L1PA10 LINE L1 0 6168 5863 250 254 0 0 chr10 50932380 50932435 -94656853 + Tigger5 DNA MER2_type 1 55 -2268 465 144 0 0 chr10 50932737 50932827 -94656461 + (GGAA)n Simple_repeat Simple_repeat 4 93 0 354 23 0 0 chr10 50932996 50933039 -94656249 + (TCTG)n Simple_repeat Simple_repeat 2 44 0 443 73 15 0 chr10 50933081 50933149 -94656139 + (CA)n Simple_repeat Simple_repeat 1 69 0 603 200 0 0 chr10 50933572 50933828 -94655460 + ACRO1 Satellite acromeric 1 256 -38 1013 145 1 0 chr10 50934160 50935718 -94653570 + ACRO1 Satellite acromeric 1 1560 -55 673 210 36 116 chr10 50936405 50936734 -94652554 - L1MB8 LINE L1 -36 6142 5840 1448 131 83 51 chr10 50937383 50937758 -94651530 + SN5 Other centromeric 1 387 -68 336 64 0 0 chr10 50938074 50938121 -94651167 + (TG)n Simple_repeat Simple_repeat 2 48 0 253 244 13 7 chr10 50938559 50938666 -94650622 + HSAT5 Satellite Satellite 1 107 -7 284 229 0 64 chr10 50938881 50939053 -94650235 + HSAT5 Satellite Satellite 1 160 -1 719 250 22 0 chr10 50939654 50939834 -94649454 + L1MC4 LINE L1 6820 7003 -1039 819 200 38 25 chr10 50939876 50940111 -94649177 + L1MC4 LINE L1 7137 7374 -668 251 283 168 84 chr10 50940745 50941241 -94648047 - L2 LINE L2 -1 3271 2745 21 0 0 0 chr10 50941675 50941696 -94647592 + AT_rich Low_complexity Low_complexity 1 21 0 2279 129 0 0 chr10 50942058 50942367 -94646921 + AluSc SINE Alu 1 309 0 4004 189 27 27 chr10 50942518 50943661 -94645627 - L1PA16 LINE L1 0 6166 5026 1848 169 17 0 chr10 50943697 50943992 -94645296 - AluSx SINE Alu -12 300 1 2084 115 10 20 chr10 50944170 50944475 -94644813 - AluSg1 SINE Alu -7 302 1 509 129 0 0 chr10 50944617 50944702 -94644586 - L1PA13 LINE L1 -4709 2078 1994 * 632 190 8 0 chr10 50944694 50944815 -94644473 + L1PA13 LINE L1 1276 1397 -6177 2916 203 2 16 chr10 50944852 50945457 -94643831 - L1PA13 LINE L1 -4796 1991 1396 1729 281 164 5 chr10 50945459 50946129 -94643159 - L1PA13 LINE L1 -5529 1258 482 426 186 0 0 chr10 50946149 50946219 -94643069 + L1PA13 LINE L1 1261 1330 -6251 355 227 0 0 chr10 50946228 50946303 -94642985 + L1PA13 LINE L1 1256 1330 -6244 6498 207 52 1 chr10 50946404 50947705 -94641583 - L1PA12 LINE L1 -5577 2004 637 556 84 12 6 chr10 50949976 50950073 -94639215 + HSAT5 Satellite Satellite 1 97 -3 262 261 0 12 chr10 50950300 50950395 -94638893 + HSAT5 Satellite Satellite 1 93 -1 268 201 31 13 chr10 50950535 50950625 -94638663 + HSAT5 Satellite Satellite 1 91 -7 * 472 273 28 7 chr10 50950622 50950765 -94638523 - MSTA LTR MaLR -154 274 129 764 209 188 26 chr10 50950811 50951045 -94638243 + THE1-int LTR MaLR 907 1178 -402 228 196 22 0 chr10 50951043 50951089 -94638199 - THE1-int LTR MaLR -613 967 921 * 299 216 102 0 chr10 50951177 50951265 -94638023 - MSTA LTR MaLR -331 97 1 1089 226 88 16 chr10 50951265 50951570 -94637718 - MSTA-int LTR MaLR 0 1651 1325 258 274 113 9 chr10 50951570 50951676 -94637612 - MSTA LTR MaLR -252 176 60 461 174 20 10 chr10 50951725 50951823 -94637465 - MSTA LTR MaLR -329 99 1 444 209 9 0 chr10 50951823 50951933 -94637355 - MSTA-int LTR MaLR 0 1651 1541 4675 252 55 8 chr10 50951935 50953232 -94636056 - MSTA-int LTR MaLR -262 1389 32 537 165 173 8 chr10 50953234 50953367 -94635921 + MST-int LTR MaLR 507 661 -990 784 254 55 46 chr10 50953393 50953700 -94635588 - MSTA LTR MaLR -43 385 76 603 224 211 21 chr10 50953704 50953941 -94635347 + THE1-int LTR MaLR 907 1188 -392 355 200 11 0 chr10 50954088 50954178 -94635110 - MSTA LTR MaLR -334 94 4 1067 204 31 53 chr10 50954181 50954499 -94634789 - MSTA-int LTR MaLR 0 1651 1341 268 196 71 80 chr10 50954505 50954617 -94634671 - MSTA LTR MaLR -257 171 61 416 229 10 0 chr10 50954652 50954748 -94634540 - MSTA LTR MaLR -331 97 1 559 152 18 0 chr10 50954748 50954860 -94634428 - MSTA-int LTR MaLR 0 1651 1538 228 198 21 73 chr10 50954871 50954967 -94634321 + C-rich Low_complexity Low_complexity 4 94 0 397 219 10 0 chr10 50954986 50955082 -94634206 - MSTA LTR MaLR -331 97 1 5922 232 50 21 chr10 50955082 50956661 -94632627 - MSTA-int LTR MaLR 0 1651 28 345 224 175 7 chr10 50956656 50956799 -94632489 + MST-int LTR MaLR 504 670 -981 * 953 252 49 8 chr10 50956828 50957094 -94632194 - MSTA LTR MaLR -54 374 98 666 220 216 22 chr10 50957121 50957353 -94631935 + THE1-int LTR MaLR 907 1183 -397 249 228 18 0 chr10 50957360 50957417 -94631871 - MSTA-int LTR MaLR -613 967 910 472 167 21 10 chr10 50957501 50957597 -94631691 - MSTA LTR MaLR -331 97 1 1480 202 6 41 chr10 50957597 50957939 -94631349 - MSTA-int LTR MaLR 0 1651 1322 362 241 139 0 chr10 50957937 50958045 -94631243 - MSTA LTR MaLR -248 180 58 * 373 253 10 0 chr10 50958090 50958189 -94631099 - MSTA LTR MaLR -328 100 1 402 169 13 0 chr10 50958189 50958266 -94631022 - MSTA-int LTR MaLR 0 1651 1574 313 175 0 48 chr10 50958268 50958331 -94630957 + MSTA LTR MaLR 317 376 -52 243 154 0 0 chr10 50958365 50958404 -94630884 - MSTA-int LTR MaLR -990 661 623 5346 229 52 37 chr10 50958404 50959851 -94629437 - MSTA-int LTR MaLR -68 1583 114 4381 229 62 27 chr10 50959951 50961092 -94628196 - MSTA-int LTR MaLR -443 1208 28 483 247 32 26 chr10 50961087 50961241 -94628047 + THE1-int LTR MaLR 463 617 -963 * 1123 229 56 4 chr10 50961258 50961525 -94627763 - MSTA LTR MaLR -52 376 96 694 226 205 25 chr10 50961549 50961788 -94627500 + THE1-int LTR MaLR 907 1188 -392 244 170 38 19 chr10 50961782 50961835 -94627453 - THE1-int LTR MaLR -616 964 911 * 481 198 10 0 chr10 50961931 50962027 -94627261 - MSTA LTR MaLR -331 97 1 1286 227 6 46 chr10 50962029 50962355 -94626933 - MSTA-int LTR MaLR -2 1649 1337 311 204 28 74 chr10 50962355 50962463 -94626825 - MSTA LTR MaLR -270 158 56 369 227 42 34 chr10 50962527 50962646 -94626642 - MSTA LTR MaLR -308 120 1 5391 246 91 10 chr10 50962646 50964149 -94625139 - MSTA-int LTR MaLR 0 1651 28 512 211 165 0 chr10 50964147 50964280 -94625008 + MST-int LTR MaLR 507 661 -990 * 1135 228 55 17 chr10 50964314 50964604 -94624684 - MSTA LTR MaLR -52 376 76 831 192 188 58 chr10 50964608 50964884 -94624404 + THE1-int LTR MaLR 907 1218 -362 262 250 18 0 chr10 50964837 50964893 -94624395 - THE1-int LTR MaLR -613 967 911 * 341 274 9 0 chr10 50965004 50965110 -94624178 - MSTA-int LTR MaLR -1517 134 28 * 402 246 162 0 chr10 50965107 50965249 -94624039 + MST-int LTR MaLR 506 670 -981 1181 240 90 28 chr10 50965274 50965628 -94623660 - MSTA LTR MaLR -52 376 1 999 161 11 17 chr10 50965628 50965808 -94623480 - MSTA-int LTR MaLR 0 1580 1402 1321 179 16 0 chr10 50965841 50966087 -94623201 - MSTA-int LTR MaLR -1401 250 1 1343 236 105 3 chr10 50966104 50966438 -94622850 - MSTA LTR MaLR -60 368 1 1976 102 60 50 chr10 50968514 50968897 -94620391 + SN5 Other centromeric 1 387 -68 257 182 0 15 chr10 50969184 50969250 -94620038 + (TG)n Simple_repeat Simple_repeat 2 66 0 271 280 6 6 chr10 50969688 50969796 -94619492 + HSAT5 Satellite Satellite 1 108 -7 281 243 36 30 chr10 50970040 50970211 -94619077 + HSAT5 Satellite Satellite 1 172 -1 763 249 22 0 chr10 50970769 50970950 -94618338 + L1MC4 LINE L1 6819 7003 -1039 910 191 38 25 chr10 50970992 50971227 -94618061 + L1MC4 LINE L1 7137 7374 -668 228 289 163 58 chr10 50972028 50972359 -94616929 - L2 LINE L2 -166 3106 2745 21 0 0 0 chr10 50972791 50972812 -94616476 + AT_rich Low_complexity Low_complexity 1 21 0 2088 130 0 0 chr10 50973174 50973475 -94615813 + AluSc SINE Alu 1 301 -8 4228 182 31 30 chr10 50973623 50974764 -94614524 - L1PA16 LINE L1 0 6166 5026 1740 162 17 0 chr10 50974800 50975096 -94614192 - AluSx SINE Alu -11 301 1 1157 162 0 0 chr10 50975325 50975516 -94613772 + AluSg/x SINE Alu 113 303 -9 415 238 0 0 chr10 50976464 50976565 -94612723 + L1MA9 LINE L1 6163 6263 -49 207 0 0 0 chr10 50978173 50978196 -94611092 + (TA)n Simple_repeat Simple_repeat 2 24 0 422 191 32 11 chr10 50978641 50978735 -94610553 + MSTA LTR MaLR 4 99 -329 277 218 89 79 chr10 50978790 50978891 -94610397 + MSTA LTR MaLR 75 176 -252 1345 204 36 43 chr10 50978891 50979220 -94610068 + MSTA-int LTR MaLR 1325 1651 0 320 194 29 2 chr10 50979222 50979296 -94609992 + MSTA LTR MaLR 3 76 -356 264 214 18 0 chr10 50979399 50979455 -94609833 + THE1-int LTR MaLR 911 967 -613 * 735 215 193 26 chr10 50979453 50979686 -94609602 - THE1-int LTR MaLR -402 1178 907 1074 205 50 36 chr10 50979698 50979976 -94609312 + MSTA LTR MaLR 95 376 -52 460 243 157 7 chr10 50980004 50980144 -94609144 - MST-int LTR MaLR -984 667 507 * 4286 246 105 23 chr10 50980142 50981401 -94607887 + MSTA-int LTR MaLR 28 1389 -262 494 184 0 44 chr10 50981397 50981511 -94607777 + MSTA-int LTR MaLR 1535 1643 -8 * 484 184 20 10 chr10 50981513 50981611 -94607677 + MSTA LTR MaLR 1 99 -329 356 248 109 0 chr10 50981660 50981761 -94607527 + MSTA LTR MaLR 60 171 -257 1129 212 87 22 chr10 50981763 50982074 -94607214 + MSTA-int LTR MaLR 1321 1651 0 357 188 89 40 chr10 50982074 50982175 -94607113 + MSTA LTR MaLR 1 106 -322 274 167 155 24 chr10 50982211 50982295 -94606993 + THE1-int LTR MaLR 921 967 -613 274 193 53 0 chr10 50982283 50982340 -94606948 - MST-int LTR MaLR -395 1256 1197 635 84 0 0 chr10 50982622 50982705 -94606583 - HSAT5 Satellite Satellite -3 83 1 7221 199 53 1 chr10 50984851 50986151 -94603137 + L1PA12 LINE L1 637 2004 -5577 264 235 0 44 chr10 50986176 50986244 -94603044 + L1PA13 LINE L1 403 467 -6320 371 240 0 0 chr10 50986252 50986327 -94602961 - L1PA13 LINE L1 -6244 1330 1256 449 171 0 0 chr10 50986336 50986406 -94602882 - L1PA13 LINE L1 -6251 1330 1261 5034 211 135 69 chr10 50986426 50988813 -94600475 + L1PA13 LINE L1 482 3048 -3749 2419 171 128 12 chr10 50988817 50989379 -94599909 + MER4-int LTR ERV1 29 655 -5943 246 91 0 68 chr10 50989545 50989589 -94599699 + LTR49 LTR ERV1 273 313 -282 542 213 44 31 chr10 50989636 50989796 -94599492 + MER4-int LTR ERV1 935 1096 -5502 6318 91 20 3 chr10 50989805 50990898 -94598390 - L1PA7 LINE L1 -1 6153 5051 3088 128 6 0 chr10 50990924 50991422 -94597866 + L1P LINE L1 4555 5055 -1091 239 159 0 0 chr10 50992078 50992122 -94597166 - L1PA7 LINE L1 -1131 5015 4972 420 159 14 0 chr10 50993427 50993496 -94595792 + L1PA12 LINE L1 1261 1330 -6251 385 227 0 0 chr10 50993505 50993580 -94595708 + L1PA12 LINE L1 1256 1330 -6244 250 269 0 30 chr10 50993588 50993655 -94595633 - L1PA13 LINE L1 -6320 467 403 6569 208 57 1 chr10 50993680 50994911 -94594377 - L1PA12 LINE L1 -5577 2004 705 1562 207 61 12 chr10 50996233 50996576 -94592712 + MSTA LTR MaLR 9 368 -60 1360 181 0 0 chr10 50996605 50996843 -94592445 + MSTA-int LTR MaLR 13 250 -1401 * 1376 167 8 12 chr10 50996840 50997092 -94592196 + MSTA-int LTR MaLR 1401 1651 0 915 265 21 39 chr10 50997092 50997371 -94591917 + MSTA LTR MaLR 1 274 -154 226 226 24 36 chr10 50997377 50997461 -94591827 - HSAT5 Satellite Satellite -1 85 3 371 205 0 12 chr10 50997707 50997806 -94591482 - HSAT5 Satellite Satellite -3 97 1 525 70 0 155 chr10 50998026 50998139 -94591149 - HSAT5 Satellite Satellite 0 95 1 269 180 10 160 chr10 50998155 50998255 -94591033 - HSAT5 Satellite Satellite -1 85 1 799 105 4 3 chr10 50998601 51003401 -94585887 + CER Satellite Satellite 1 4804 -6 773 185 7 0 chr10 51003394 51003529 -94585759 + MLT1A1 LTR MaLR 228 363 -2 * 3652 189 104 76 chr10 51003531 51004974 -94584314 + L1MCa LINE L1 723 2205 -4221 298 146 52 52 chr10 51004973 51005069 -94584219 + L1MCa LINE L1 2104 2199 -4227 * 1614 161 54 19 chr10 51005073 51005445 -94583843 + L1MCa LINE L1 2104 2488 -3938 11178 155 61 33 chr10 51005445 51006148 -94583140 + Tigger1 DNA MER2_type 1 683 -1735 2253 101 10 10 chr10 51006148 51006454 -94582834 - AluSp SINE Alu -7 306 1 11178 155 61 33 chr10 51006454 51007312 -94581976 + Tigger1 DNA MER2_type 683 1516 -902 1841 150 27 10 chr10 51007312 51007612 -94581676 + AluSg SINE Alu 1 305 -5 11178 155 61 33 chr10 51007612 51008181 -94581107 + Tigger1 DNA MER2_type 1516 2205 -213 1190 184 127 22 chr10 51008181 51008448 -94580840 + AluJo SINE Alu 1 295 -7 11178 155 61 33 chr10 51008448 51008664 -94580624 + Tigger1 DNA MER2_type 2205 2414 -4 235 164 0 18 chr10 51008670 51008725 -94580563 + L1MB1 LINE L1 6100 6153 -15 2300 84 0 0 chr10 51008731 51009015 -94580273 - AluY SINE Alu -19 292 9 1032 128 0 14 chr10 51009130 51009505 -94579783 + (CATTC)n Satellite Satellite 1 369 0 597 184 0 0 chr10 51009526 51009684 -94579604 + (CATTC)n Satellite Satellite 2 159 0 1008 128 2 7 chr10 51009709 51010300 -94578988 + (CATTC)n Satellite Satellite 1 588 0 437 138 0 37 chr10 51010313 51010422 -94578866 + (CATTC)n Satellite Satellite 2 106 0 1110 100 0 0 chr10 51010441 51010621 -94578667 + (CATTC)n Satellite Satellite 1 180 0 4046 183 57 25 chr10 51010621 51011709 -94577579 - L1 LINE L1 -1482 4664 3378 2041 128 14 0 chr10 51011709 51011998 -94577290 - AluSx SINE Alu -19 293 1 4046 183 57 25 chr10 51011998 51012423 -94576865 - L1 LINE L1 -2768 3378 2968 2310 76 0 23 chr10 51012424 51012726 -94576562 - AluY SINE Alu -16 295 1 708 283 11 0 chr10 51012839 51013104 -94576184 + L1M4 LINE L1 4133 4400 -1746 180 245 38 38 chr10 51013303 51013356 -94575932 - MIR SINE MIR -56 152 100 825 231 37 53 chr10 51013686 51014063 -94575225 - MER66A LTR ERV1 -40 438 68 2392 81 0 0 chr10 51014643 51014938 -94574350 + AluSg SINE Alu 1 295 -15 303 251 37 63 chr10 51016486 51016734 -94572554 - MLT1H LTR MaLR 0 549 311 3739 119 7 11 chr10 51018356 51018919 -94570369 - LTR6A LTR ERV1 0 564 4 2197 140 93 5 chr10 51019000 51019399 -94569889 - MER57B LTR ERV1 0 434 1 1284 135 131 0 chr10 51019399 51019628 -94569660 - MER57B-int LTR ERV1 0 7537 7279 702 115 23 31 chr10 51019628 51019758 -94569530 - LTR54B LTR ERV1 -367 131 3 2195 117 0 0 chr10 51019773 51020064 -94569224 + AluY SINE Alu 1 291 -20 629 164 9 0 chr10 51020065 51020175 -94569113 - MER57B-int LTR ERV1 -395 7142 7032 924 154 37 6 chr10 51021115 51021277 -94568011 - MER57B-int LTR ERV1 -710 6827 6661 * 9470 127 33 32 chr10 51021271 51022230 -94567058 - MER57B-int LTR ERV1 -1351 6186 5230 2034 124 7 34 chr10 51022230 51022528 -94566760 - AluSx SINE Alu -22 290 1 9470 127 33 32 chr10 51022528 51022841 -94566447 - MER57B-int LTR ERV1 -2307 5230 4919 2173 98 11 0 chr10 51022841 51023127 -94566161 + AluY SINE Alu 5 293 -18 9470 127 33 32 chr10 51023127 51023583 -94565705 - MER57B-int LTR ERV1 -2618 4919 4455 230 0 33 0 chr10 51023584 51023614 -94565674 + (TTA)n Simple_repeat Simple_repeat 3 33 0 40591 57 3 2 chr10 51023614 51029746 -94559542 - L1PA3 LINE L1 -18 6137 1 286 121 330 11 chr10 51029746 51029837 -94559451 - MER57B-int LTR ERV1 -3069 4468 4349 1981 134 3 3 chr10 51029839 51030137 -94559151 - AluSp SINE Alu -15 298 1 1183 209 70 0 chr10 51030161 51030420 -94558868 - MER52A-int LTR ERV1 -5911 1626 1350 * 3940 103 24 50 chr10 51030418 51031077 -94558211 - MER52A-int LTR ERV1 -6808 729 88 3834 172 36 22 chr10 51031077 51031817 -94557471 - MER52A LTR ERV1 0 1755 1005 1692 218 276 0 chr10 51031829 51032339 -94556949 - MER52A LTR ERV1 -1104 651 1 941 150 25 35 chr10 51032479 51032679 -94556609 - MER57B LTR ERV1 0 434 237 1459 155 8 11 chr10 51032694 51032958 -94556330 - MER57B LTR ERV1 -171 263 1 2131 123 7 7 chr10 51033353 51033662 -94555626 - AluSp SINE Alu -4 309 1 602 260 91 46 chr10 51034402 51034853 -94554435 - MLT1H1 LTR MaLR -2 528 1 255 152 0 0 chr10 51035513 51035559 -94553729 + T-rich Low_complexity Low_complexity 1 46 0 305 70 70 18 chr10 51035993 51036050 -94553238 - MLT1G1 LTR MaLR 0 595 536 389 238 0 0 chr10 51037448 51037549 -94551739 + L1MA9 LINE L1 6163 6263 -49 327 49 0 0 chr10 51039153 51039194 -94550094 + (TA)n Simple_repeat Simple_repeat 1 41 0 1512 182 24 30 chr10 51040002 51040299 -94548989 + AluJo SINE Alu 6 300 -12 2658 216 24 15 chr10 51040412 51041540 -94547748 + L1MA5 LINE L1 4808 5946 -354 1034 255 27 8 chr10 51041541 51041800 -94547488 + AluJo SINE Alu 1 264 -48 1249 178 68 0 chr10 51041864 51042145 -94547143 + L1MA5 LINE L1 6001 6300 0 560 293 102 20 chr10 51042176 51042553 -94546735 + MLT1G1 LTR MaLR 79 561 -34 2220 190 53 46 chr10 51043896 51044946 -94544342 + L1MB8 LINE L1 4776 5836 -342 1768 156 94 6 chr10 51044955 51045360 -94543928 + MER61C LTR ERV1 11 343 0 1136 204 68 12 chr10 51045360 51045683 -94543605 + L1MB8 LINE L1 5833 6173 -5 1079 231 91 25 chr10 51045903 51046266 -94543022 + MER4E LTR ERV1 2 388 -391 2699 128 26 7 chr10 51046361 51046815 -94542473 + L1PA10 LINE L1 5655 6117 -51 672 117 11 0 chr10 51046816 51046910 -94542378 - AluSg SINE Alu -213 97 3 2203 137 0 0 chr10 51047261 51047568 -94541720 - AluSx SINE Alu -5 307 1 1417 174 4 38 chr10 51047987 51048251 -94541037 - AluJb SINE Alu -20 292 38 188 250 50 0 chr10 51048274 51048334 -94540954 + MIR SINE MIR 198 260 -2 1648 210 75 44 chr10 51049342 51049846 -94539442 + L1MB8 LINE L1 5653 6172 -6 23 33 0 0 chr10 51050679 51050709 -94538579 + AT_rich Low_complexity Low_complexity 1 30 0 449 306 51 13 chr10 51050924 51051081 -94538207 + L2 LINE L2 2722 2884 -430 897 244 40 14 chr10 51051803 51052078 -94537210 - L1MB7 LINE L1 0 6184 5903 213 39 0 0 chr10 51053338 51053364 -94535924 + (CA)n Simple_repeat Simple_repeat 2 27 0 23 0 0 0 chr10 51054120 51054143 -94535145 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr10 51055069 51055091 -94534197 + AT_rich Low_complexity Low_complexity 1 22 0 452 279 93 18 chr10 51055179 51055405 -94533883 - L1MB7 LINE L1 -478 5643 5401 1985 138 0 3 chr10 51055524 51055840 -94533448 + AluSq SINE Alu 1 315 0 592 71 24 0 chr10 51057843 51057928 -94531360 - L1PA5 LINE L1 -2 6152 6066 1318 257 31 3 chr10 51060668 51060960 -94528328 + AluJo SINE Alu 1 300 -12 206 225 0 0 chr10 51061181 51061221 -94528067 - L2 LINE L2 -12 3301 3262 1982 153 7 0 chr10 51061503 51061804 -94527484 - AluSx SINE Alu -9 303 1 638 160 0 0 chr10 51062270 51062370 -94526918 - AluSp/q SINE Alu -18 295 196 2083 127 7 0 chr10 51062537 51062829 -94526459 - AluSp SINE Alu -18 295 2 1954 152 0 0 chr10 51064598 51064901 -94524387 + AluSx SINE Alu 6 308 -4 749 98 4 0 chr10 51066203 51069036 -94520252 + CER Satellite Satellite 1 2844 -31 339 316 13 13 chr10 51069229 51069387 -94519901 + L1M4 LINE L1 4795 4952 -1194 1837 84 4 0 chr10 51069400 51069627 -94519661 + AluY SINE Alu 65 292 -19 235 164 0 18 chr10 51069633 51069688 -94519600 - L1MB1 LINE L1 -15 6153 6100 941 162 134 9 chr10 51069694 51069910 -94519378 - Tigger1 DNA MER2_type -4 2414 2172 452 207 23 109 chr10 51069910 51070084 -94519204 - FRAM SINE Alu -17 159 1 1597 127 78 122 chr10 51070084 51070509 -94518779 - Tigger1 DNA MER2_type -235 2183 1778 590 261 53 25 chr10 51070613 51070935 -94518353 + MER66A LTR ERV1 108 438 -40 180 245 38 38 chr10 51071265 51071318 -94517970 + MIR SINE MIR 100 152 -56 719 279 11 0 chr10 51071517 51071782 -94517506 - L1M4 LINE L1 -1746 4400 4133 2280 73 7 20 chr10 51071895 51072196 -94517092 + AluY SINE Alu 1 297 -14 3730 196 55 25 chr10 51072197 51072624 -94516664 + L1 LINE L1 2968 3381 -2765 1999 135 14 0 chr10 51072624 51072912 -94516376 + AluSx SINE Alu 1 292 -20 3730 196 55 25 chr10 51072912 51074001 -94515287 + L1 LINE L1 3381 4664 -1482 975 117 0 14 chr10 51074001 51074284 -94515004 + (GAATG)n Satellite Satellite 1 278 0 868 124 0 27 chr10 51074300 51074485 -94514803 + (GAATG)n Satellite Satellite 1 180 0 1031 132 2 6 chr10 51074515 51075036 -94514252 + (GAATG)n Satellite Satellite 1 518 0 972 144 0 0 chr10 51075060 51075342 -94513946 + (GAATG)n Satellite Satellite 1 282 0 1155 118 0 10 chr10 51075362 51075853 -94513435 + (GAATG)n Satellite Satellite 1 485 0 1074 112 0 0 chr10 51075867 51076045 -94513243 + (GAATG)n Satellite Satellite 3 180 0 282 132 0 0 chr10 51076066 51076119 -94513169 + (GAATG)n Satellite Satellite 3 55 0 993 119 0 22 chr10 51076146 51076506 -94512782 + (GAATG)n Satellite Satellite 2 518 0 1146 132 0 0 chr10 51076541 51076848 -94512440 + (GAATG)n Satellite Satellite 1 307 0 1125 101 0 0 chr10 51076866 51077045 -94512243 + (GAATG)n Satellite Satellite 1 179 0 1080 110 2 11 chr10 51077110 51077474 -94511814 + (GAATG)n Satellite Satellite 1 540 0 883 125 5 5 chr10 51077492 51077724 -94511564 + (GAATG)n Satellite Satellite 1 232 0 1038 124 0 11 chr10 51077746 51078107 -94511181 + (GAATG)n Satellite Satellite 1 534 0 1022 112 6 0 chr10 51078134 51078312 -94510976 + (GAATG)n Satellite Satellite 2 180 0 702 130 0 0 chr10 51078331 51078462 -94510826 + (GAATG)n Satellite Satellite 2 132 0 939 134 0 0 chr10 51078478 51078657 -94510631 + (GAATG)n Satellite Satellite 2 180 0 333 117 0 0 chr10 51078676 51078736 -94510552 + (GAATG)n Satellite Satellite 3 62 0 914 119 0 27 chr10 51078748 51078933 -94510355 + (GAATG)n Satellite Satellite 1 180 0 990 131 2 10 chr10 51079102 51079390 -94509898 + (GAATG)n Satellite Satellite 1 454 0 903 135 0 0 chr10 51079390 51079560 -94509728 + (GAATG)n Satellite Satellite 3 172 0 771 155 0 0 chr10 51079850 51080024 -94509264 + (GAATG)n Satellite Satellite 2 175 0 246 148 0 0 chr10 51080045 51080099 -94509189 + (GAATG)n Satellite Satellite 2 55 0 1073 107 3 23 chr10 51080130 51080464 -94508824 + (GAATG)n Satellite Satellite 1 497 0 906 138 0 0 chr10 51080464 51080638 -94508650 + (GAATG)n Satellite Satellite 2 175 0 972 130 0 0 chr10 51080709 51081133 -94508155 + (GAATG)n Satellite Satellite 1 424 0 813 157 0 0 chr10 51081146 51081318 -94507970 + (GAATG)n Satellite Satellite 2 173 0 921 136 0 0 chr10 51081346 51081523 -94507765 + (GAATG)n Satellite Satellite 2 178 0 830 156 0 18 chr10 51081543 51081814 -94507474 + (GAATG)n Satellite Satellite 1 266 0 984 133 0 0 chr10 51081834 51082014 -94507274 + (GAATG)n Satellite Satellite 1 180 0 719 148 0 27 chr10 51082041 51082224 -94507064 + (GAATG)n Satellite Satellite 1 178 0 953 105 6 0 chr10 51082240 51082402 -94506886 + (GAATG)n Satellite Satellite 2 164 0 858 144 0 0 chr10 51082423 51082603 -94506685 + (GAATG)n Satellite Satellite 1 180 0 1055 102 6 0 chr10 51082648 51082825 -94506463 + (GAATG)n Satellite Satellite 3 180 0 183 184 0 0 chr10 51082827 51082865 -94506423 + (CAGAA)n Simple_repeat Simple_repeat 3 40 0 918 85 5 58 chr10 51082882 51083070 -94506218 + (GAATG)n Satellite Satellite 3 180 0 972 129 4 0 chr10 51083082 51083359 -94505929 + (GAATG)n Satellite Satellite 1 278 0 792 149 0 0 chr10 51083400 51083574 -94505714 + (GAATG)n Satellite Satellite 2 175 0 963 152 0 0 chr10 51083595 51083904 -94505384 + (GAATG)n Satellite Satellite 1 309 0 845 90 11 53 chr10 51083920 51084108 -94505180 + (GAATG)n Satellite Satellite 1 180 0 1044 122 0 2 chr10 51084159 51084477 -94504811 + (GAATG)n Satellite Satellite 1 497 0 855 156 0 0 chr10 51084498 51084677 -94504611 + (GAATG)n Satellite Satellite 2 180 0 843 111 11 33 chr10 51084710 51084890 -94504398 + (GAATG)n Satellite Satellite 3 178 0 873 149 0 0 chr10 51084922 51085151 -94504137 + (GAATG)n Satellite Satellite 1 229 0 1254 122 0 0 chr10 51085168 51085648 -94503640 + (GAATG)n Satellite Satellite 1 480 0 859 122 0 26 chr10 51085677 51086111 -94503177 + (GAATG)n Satellite Satellite 1 422 0 842 153 6 0 chr10 51086138 51086315 -94502973 + (GAATG)n Satellite Satellite 2 179 0 999 134 0 14 chr10 51086327 51086726 -94502562 + (GAATG)n Satellite Satellite 2 554 0 1083 116 0 23 chr10 51086746 51087111 -94502177 + (GAATG)n Satellite Satellite 3 526 0 953 105 6 0 chr10 51087127 51087289 -94501999 + (GAATG)n Satellite Satellite 2 164 0 1055 131 3 5 chr10 51087310 51087758 -94501530 + (GAATG)n Satellite Satellite 3 624 0 918 85 5 58 chr10 51087774 51087962 -94501326 + (GAATG)n Satellite Satellite 3 180 0 243 61 0 0 chr10 51087974 51088007 -94501281 + (GAATG)n Satellite Satellite 3 35 0 868 101 0 53 chr10 51088033 51088222 -94501066 + (GAATG)n Satellite Satellite 2 180 0 792 181 0 0 chr10 51088249 51088677 -94500611 + (GAATG)n Satellite Satellite 1 428 0 246 148 0 0 chr10 51088698 51088752 -94500536 + (GAATG)n Satellite Satellite 2 55 0 1073 106 3 23 chr10 51088783 51089117 -94500171 + (GAATG)n Satellite Satellite 1 497 0 927 132 0 0 chr10 51089117 51089291 -94499997 + (GAATG)n Satellite Satellite 2 175 0 993 127 0 0 chr10 51089362 51089786 -94499502 + (GAATG)n Satellite Satellite 1 424 0 792 163 0 0 chr10 51089799 51089971 -94499317 + (GAATG)n Satellite Satellite 2 173 0 921 136 0 0 chr10 51089999 51090176 -94499112 + (GAATG)n Satellite Satellite 2 178 0 757 157 6 6 chr10 51090197 51090375 -94498913 + (GAATG)n Satellite Satellite 3 180 0 1020 141 0 0 chr10 51090412 51090846 -94498442 + (GAATG)n Satellite Satellite 1 434 0 1264 120 1 4 chr10 51090866 51091664 -94497624 + (GAATG)n Satellite Satellite 1 795 0 963 142 3 4 chr10 51091693 51092447 -94496841 + (GAATG)n Satellite Satellite 1 752 0 312 111 0 0 chr10 51092473 51092527 -94496761 + (GAATG)n Satellite Satellite 2 55 0 936 144 0 0 chr10 51092539 51092867 -94496421 + (GAATG)n Satellite Satellite 1 328 0 999 123 0 0 chr10 51092888 51093141 -94496147 + (GAATG)n Satellite Satellite 1 253 0 843 151 0 0 chr10 51093163 51093428 -94495860 + (GAATG)n Satellite Satellite 1 265 0 748 117 0 48 chr10 51093447 51093635 -94495653 + (GAATG)n Satellite Satellite 2 180 0 1089 101 0 0 chr10 51093652 51093831 -94495457 + (GAATG)n Satellite Satellite 1 179 0 264 176 0 0 chr10 51093842 51093910 -94495378 + (GAATG)n Satellite Satellite 2 69 0 1184 99 4 2 chr10 51093927 51094319 -94494969 + (GAATG)n Satellite Satellite 1 572 0 750 135 5 32 chr10 51094335 51094520 -94494768 + (GAATG)n Satellite Satellite 1 180 0 1167 109 0 0 chr10 51094555 51094919 -94494369 + (GAATG)n Satellite Satellite 1 364 0 951 154 0 1 chr10 51094935 51095652 -94493636 + (GAATG)n Satellite Satellite 3 889 0 1008 129 3 0 chr10 51095664 51095977 -94493311 + (GAATG)n Satellite Satellite 1 314 0 1131 94 0 0 chr10 51095998 51096178 -94493110 + (GAATG)n Satellite Satellite 1 180 0 213 167 0 0 chr10 51096203 51096257 -94493031 + (GAATG)n Satellite Satellite 2 55 0 847 106 0 53 chr10 51096274 51096463 -94492825 + (GAATG)n Satellite Satellite 1 179 0 870 157 0 0 chr10 51096505 51096683 -94492605 + (GAATG)n Satellite Satellite 1 178 0 975 137 0 6 chr10 51096706 51097002 -94492286 + (GAATG)n Satellite Satellite 1 471 0 888 100 0 53 chr10 51097018 51097208 -94492080 + (GAATG)n Satellite Satellite 1 180 0 954 130 0 0 chr10 51097245 51097422 -94491866 + (GAATG)n Satellite Satellite 2 178 0 909 138 0 0 chr10 51097440 51097672 -94491616 + (GAATG)n Satellite Satellite 1 232 0 882 153 2 0 chr10 51097689 51098292 -94490996 + (GAATG)n Satellite Satellite 1 604 0 1110 137 0 3 chr10 51098317 51098839 -94490449 + (GAATG)n Satellite Satellite 2 683 0 792 149 0 0 chr10 51098880 51099054 -94490234 + (GAATG)n Satellite Satellite 2 175 0 246 148 0 0 chr10 51099075 51099129 -94490159 + (GAATG)n Satellite Satellite 2 55 0 1055 116 2 9 chr10 51099146 51099798 -94489490 + (GAATG)n Satellite Satellite 3 823 0 993 130 0 0 chr10 51099814 51100173 -94489115 + (GAATG)n Satellite Satellite 1 359 0 792 163 0 0 chr10 51100186 51100358 -94488930 + (GAATG)n Satellite Satellite 2 173 0 921 136 0 0 chr10 51100386 51100563 -94488725 + (GAATG)n Satellite Satellite 2 178 0 1038 144 0 5 chr10 51100583 51101213 -94488075 + (GAATG)n Satellite Satellite 1 626 0 1234 92 3 6 chr10 51101230 51101598 -94487690 + (GAATG)n Satellite Satellite 1 366 0 884 130 0 27 chr10 51101728 51101913 -94487375 + (GAATG)n Satellite Satellite 1 180 0 1080 120 1 9 chr10 51101941 51102446 -94486842 + (GAATG)n Satellite Satellite 1 679 0 873 133 0 0 chr10 51102463 51102621 -94486667 + (GAATG)n Satellite Satellite 2 159 0 1074 139 0 0 chr10 51102641 51102923 -94486365 + (GAATG)n Satellite Satellite 1 282 0 1083 104 0 0 chr10 51102941 51103114 -94486174 + (GAATG)n Satellite Satellite 3 175 0 927 145 0 10 chr10 51103171 51103499 -94485789 + (GAATG)n Satellite Satellite 1 503 0 1056 106 0 0 chr10 51103515 51103694 -94485594 + (GAATG)n Satellite Satellite 2 180 0 743 154 4 0 chr10 51103705 51103939 -94485349 + (GAATG)n Satellite Satellite 1 235 0 993 138 0 9 chr10 51103964 51104299 -94484989 + (GAATG)n Satellite Satellite 1 508 0 972 124 0 0 chr10 51104299 51104477 -94484811 + (GAATG)n Satellite Satellite 3 180 0 981 131 0 4 chr10 51104545 51104872 -94484416 + (GAATG)n Satellite Satellite 2 498 0 1011 158 1 0 chr10 51104883 51105571 -94483717 + (GAATG)n Satellite Satellite 1 689 0 642 179 0 0 chr10 51105583 51105751 -94483537 + (GAATG)n Satellite Satellite 2 169 0 993 118 0 0 chr10 51105782 51105960 -94483328 + (GAATG)n Satellite Satellite 3 180 0 969 143 0 7 chr10 51105991 51106298 -94482990 + (GAATG)n Satellite Satellite 1 481 0 930 135 0 0 chr10 51106298 51106476 -94482812 + (GAATG)n Satellite Satellite 2 179 0 1092 111 0 0 chr10 51106487 51106667 -94482621 + (GAATG)n Satellite Satellite 1 180 0 692 132 11 33 chr10 51106726 51106908 -94482380 + (GAATG)n Satellite Satellite 3 180 0 870 141 0 0 chr10 51106924 51107094 -94482194 + (GAATG)n Satellite Satellite 2 171 0 1097 85 0 9 chr10 51107107 51107340 -94481948 + (GAATG)n Satellite Satellite 1 230 0 1023 118 0 14 chr10 51107372 51107745 -94481543 + (GAATG)n Satellite Satellite 1 367 0 258 148 0 0 chr10 51107766 51107820 -94481468 + (GAATG)n Satellite Satellite 2 55 0 1113 112 3 0 chr10 51107836 51108184 -94481104 + (GAATG)n Satellite Satellite 1 349 0 1061 124 6 0 chr10 51108214 51108566 -94480722 + (GAATG)n Satellite Satellite 1 354 0 875 135 0 27 chr10 51108577 51108762 -94480526 + (GAATG)n Satellite Satellite 1 180 0 183 42 0 0 chr10 51108777 51108801 -94480487 + (GAATG)n Satellite Satellite 2 25 0 801 168 0 0 chr10 51108817 51108996 -94480292 + (GAATG)n Satellite Satellite 2 180 0 954 150 0 0 chr10 51109015 51109315 -94479973 + (GAATG)n Satellite Satellite 1 300 0 1000 107 5 20 chr10 51109352 51109800 -94479488 + (GAATG)n Satellite Satellite 1 618 0 1074 94 0 0 chr10 51109820 51109990 -94479298 + (GAATG)n Satellite Satellite 2 171 0 1080 111 0 0 chr10 51110001 51110181 -94479107 + (GAATG)n Satellite Satellite 1 180 0 837 145 0 0 chr10 51110216 51110395 -94478893 + (GAATG)n Satellite Satellite 2 180 0 1023 129 0 0 chr10 51110413 51110591 -94478697 + (GAATG)n Satellite Satellite 1 178 0 990 129 0 26 chr10 51110615 51110989 -94478299 + (GAATG)n Satellite Satellite 1 540 0 990 129 0 0 chr10 51111010 51111258 -94478030 + (GAATG)n Satellite Satellite 1 248 0 1036 131 0 23 chr10 51111275 51111971 -94477317 + (GAATG)n Satellite Satellite 3 860 0 1113 142 2 0 chr10 51111982 51113447 -94475841 + (GAATG)n Satellite Satellite 1 1468 0 1002 128 0 10 chr10 51113484 51113926 -94475362 + (GAATG)n Satellite Satellite 1 611 0 987 119 0 0 chr10 51113926 51114102 -94475186 + (GAATG)n Satellite Satellite 3 178 0 936 152 2 0 chr10 51114180 51114672 -94474616 + (GAATG)n Satellite Satellite 1 493 0 717 168 0 0 chr10 51114683 51114862 -94474426 + (GAATG)n Satellite Satellite 2 180 0 840 136 0 0 chr10 51115057 51115219 -94474069 + (GAATG)n Satellite Satellite 2 163 0 1020 134 0 2 chr10 51115236 51115759 -94473529 + (GAATG)n Satellite Satellite 1 521 0 866 147 1 10 chr10 51115805 51116541 -94472747 + (GAATG)n Satellite Satellite 1 729 0 984 140 0 4 chr10 51116571 51117104 -94472184 + (GAATG)n Satellite Satellite 3 708 0 1067 120 4 6 chr10 51117116 51117468 -94471820 + (GAATG)n Satellite Satellite 2 522 0 984 142 3 7 chr10 51117501 51117750 -94471538 + (GAATG)n Satellite Satellite 1 427 0 902 111 11 11 chr10 51117750 51117930 -94471358 + (GAATG)n Satellite Satellite 1 180 0 811 106 0 53 chr10 51118233 51118422 -94470866 + (GAATG)n Satellite Satellite 2 180 0 246 148 0 0 chr10 51118443 51118497 -94470791 + (GAATG)n Satellite Satellite 2 55 0 1040 119 4 2 chr10 51118514 51118872 -94470416 + (GAATG)n Satellite Satellite 1 539 0 993 131 0 0 chr10 51118885 51119061 -94470227 + (GAATG)n Satellite Satellite 2 177 0 300 53 0 0 chr10 51119093 51119131 -94470157 + (GAATG)n Satellite Satellite 2 39 0 969 143 0 11 chr10 51119152 51119517 -94469771 + (GAATG)n Satellite Satellite 1 540 0 2291 95 0 0 chr10 51119963 51120257 -94469031 + AluSg SINE Alu 1 294 -16 43277 57 3 2 chr10 51120626 51126328 -94462960 - L1P2 LINE L1 -450 5705 1 308 132 330 11 chr10 51126328 51126419 -94462869 - MER52A-int LTR ERV1 -1527 3353 3297 1945 138 3 3 chr10 51126421 51126719 -94462569 - AluSp SINE Alu -15 298 1 1329 199 68 0 chr10 51126750 51127001 -94462287 - MER52A-int LTR ERV1 -5920 1617 1350 * 4181 108 24 50 chr10 51126999 51127658 -94461630 - MER52A-int LTR ERV1 -6808 729 88 4160 170 36 22 chr10 51127658 51128398 -94460890 - MER52A LTR ERV1 0 1755 1005 1780 222 276 0 chr10 51128410 51128920 -94460368 - MER52A LTR ERV1 -1104 651 1 1610 165 11 76 chr10 51129060 51129537 -94459751 - MER57B LTR ERV1 0 403 1 2071 123 7 10 chr10 51129933 51130242 -94459046 - AluSp SINE Alu -5 308 1 692 266 94 45 chr10 51130982 51131433 -94457855 - MLT1H1 LTR MaLR -2 528 1 246 156 0 0 chr10 51132092 51132137 -94457151 + T-rich Low_complexity Low_complexity 1 45 0 380 271 153 57 chr10 51132572 51133077 -94456211 - MLT1H1 LTR MaLR 0 555 3 785 246 212 10 chr10 51133103 51133494 -94455794 - L1M4 LINE L1 -3212 2934 2465 1234 254 118 55 chr10 51133846 51134627 -94454661 - L1MEc LINE L1 -3212 3003 2186 1665 209 7 0 chr10 51134627 51134934 -94454354 - AluJb SINE Alu -3 309 1 1234 254 118 55 chr10 51134934 51135044 -94454244 - L1MEc LINE L1 -4029 2186 2084 1543 183 10 17 chr10 51135045 51135335 -94453953 + AluJb SINE Alu 1 288 -24 22 0 0 0 chr10 51135339 51135361 -94453927 + AT_rich Low_complexity Low_complexity 1 22 0 2291 185 175 64 chr10 51135361 51136161 -94453127 - L1MB2 LINE L1 -2 6169 5281 3550 228 52 78 chr10 51137196 51137253 -94452035 - L1MB2 LINE L1 -866 5280 5223 1180 172 110 0 chr10 51137253 51137462 -94451826 + MER46A DNA MER2_type 2 233 -3 3550 228 52 78 chr10 51137462 51138248 -94451040 - L1MB2 LINE L1 -923 5223 4419 2562 57 0 16 chr10 51138248 51138564 -94450724 - AluY SINE Alu 0 311 1 3550 228 52 78 chr10 51138564 51138595 -94450693 - L1MB2 LINE L1 -1727 4419 4389 2057 137 0 7 chr10 51138595 51138901 -94450387 - AluSx SINE Alu -8 304 1 3550 228 52 78 chr10 51138901 51138977 -94450311 - L1MB2 LINE L1 -1757 4389 4313 1852 165 0 50 chr10 51138977 51139299 -94449989 - AluSx SINE Alu -6 306 1 3550 228 52 78 chr10 51139299 51139726 -94449562 - L1MB2 LINE L1 -1833 4313 3935 1687 257 56 14 chr10 51139721 51140382 -94448906 - L1MB2 LINE L1 -2468 3678 2990 * 300 182 30 0 chr10 51140385 51140451 -94448837 - L1MB2 LINE L1 -3096 3050 2983 238 227 30 0 chr10 51140447 51140513 -94448775 - L1MB2 LINE L1 -3096 3050 2983 * 427 227 31 8 chr10 51140509 51140637 -94448651 - L1MB2 LINE L1 -3096 3050 2920 1995 115 6 42 chr10 51140768 51141080 -94448208 + AluSx SINE Alu 1 301 -11 30 27 0 0 chr10 51141204 51141241 -94448047 + AT_rich Low_complexity Low_complexity 1 37 0 2145 133 0 0 chr10 51141241 51141535 -94447753 + AluSx SINE Alu 2 295 -17 2239 98 10 0 chr10 51141539 51141836 -94447452 + AluY SINE Alu 3 302 -9 4181 182 5 94 chr10 51141945 51143678 -94445610 + L1PA13 LINE L1 1523 3052 -3745 2383 186 121 11 chr10 51143679 51144242 -94445046 + MER4-int LTR ERV1 29 653 -5945 222 37 0 0 chr10 51144327 51144354 -94444934 + (CAAA)n Simple_repeat Simple_repeat 1 27 0 23 33 0 0 chr10 51144379 51144409 -94444879 + AT_rich Low_complexity Low_complexity 1 30 0 280 91 0 45 chr10 51144416 51144460 -94444828 + LTR49 LTR ERV1 273 314 -281 625 217 37 25 chr10 51144507 51144668 -94444620 + MER4-int LTR ERV1 935 1097 -5501 6571 91 41 0 chr10 51144677 51145759 -94443529 - L1PA7 LINE L1 0 6154 5051 3174 119 8 0 chr10 51145785 51146282 -94443006 + L1P LINE L1 4555 5055 -1091 1583 224 52 3 chr10 51148178 51148521 -94440767 + MSTA LTR MaLR 9 368 -60 1373 176 0 0 chr10 51148550 51148788 -94440500 + MSTA-int LTR MaLR 13 250 -1401 * 1423 159 8 12 chr10 51148785 51149037 -94440251 + MSTA-int LTR MaLR 1401 1651 0 1000 258 7 39 chr10 51149037 51149320 -94439968 + MSTA LTR MaLR 1 274 -154 241 224 24 35 chr10 51149326 51149427 -94439861 - HSAT5 Satellite Satellite -1 99 1 331 195 12 12 chr10 51149657 51149755 -94439533 - HSAT5 Satellite Satellite -3 98 1 622 119 0 32 chr10 51149916 51150102 -94439186 - HSAT5 Satellite Satellite 0 180 1 257 170 10 160 chr10 51150118 51150218 -94439070 - HSAT5 Satellite Satellite -1 85 1 643 130 10 16 chr10 51150564 51150813 -94438475 + CER Satellite Satellite 1 247 -6 1130 119 4 2 chr10 51151682 51152564 -94436724 - ACRO1 Satellite acromeric 0 883 1 1281 224 167 19 chr10 51152669 51153089 -94436199 - MER21B LTR ERV1 -183 680 199 243 237 118 0 chr10 51153341 51153417 -94435871 - MER5A DNA MER1_type -6 183 99 390 21 0 0 chr10 51153833 51153880 -94435408 + (TCTG)n Simple_repeat Simple_repeat 2 48 0 371 106 15 0 chr10 51153922 51153988 -94435300 + (CA)n Simple_repeat Simple_repeat 1 67 0 581 202 0 0 chr10 51154410 51154666 -94434622 + ACRO1 Satellite acromeric 1 256 -38 291 171 0 0 chr10 51154916 51154992 -94434296 + G-rich Low_complexity Low_complexity 1 76 0 253 208 10 62 chr10 51155006 51155102 -94434186 + G-rich Low_complexity Low_complexity 5 95 0 761 107 5 2 chr10 51155475 51158690 -94430598 + CER Satellite Satellite 1 3223 -6 186 103 0 0 chr10 51158971 51159000 -94430288 + (TTTCG)n Simple_repeat Simple_repeat 2 30 0 1891 97 71 0 chr10 51159000 51159268 -94430020 - L1PA10 LINE L1 -19 6149 5863 253 186 0 0 chr10 51159666 51159709 -94429579 + Tigger5 DNA MER2_type 13 55 -2268 651 99 0 0 chr10 51160011 51160112 -94429176 + (GGAA)n Simple_repeat Simple_repeat 4 104 0 765 205 37 118 chr10 51160165 51160487 -94428801 + L1MB8 LINE L1 5840 6135 -43 3768 203 12 70 chr10 51162209 51163239 -94426049 + L1P LINE L1 1432 2401 -3745 2433 184 127 11 chr10 51163240 51163799 -94425489 + MER4-int LTR ERV1 29 652 -5946 258 32 0 0 chr10 51163885 51163916 -94425372 + (CAAA)n Simple_repeat Simple_repeat 1 31 0 22 35 0 0 chr10 51163941 51163970 -94425318 + AT_rich Low_complexity Low_complexity 1 29 0 280 91 0 45 chr10 51163977 51164021 -94425267 + LTR49 LTR ERV1 273 314 -281 623 199 43 31 chr10 51164068 51164229 -94425059 + MER4-int LTR ERV1 935 1097 -5501 6518 99 41 0 chr10 51164237 51165321 -94423967 - L1PA7 LINE L1 -2 6152 5051 3021 133 8 0 chr10 51165347 51165844 -94423444 + L1P LINE L1 4555 5055 -1091 1602 222 52 3 chr10 51167844 51168187 -94421101 + MSTA LTR MaLR 9 368 -60 1435 160 0 0 chr10 51168216 51168454 -94420834 + MSTA-int LTR MaLR 13 250 -1401 1363 171 8 12 chr10 51168451 51168703 -94420585 + MSTA-int LTR MaLR 1401 1651 0 * 963 265 7 39 chr10 51168703 51168986 -94420302 + MSTA LTR MaLR 1 274 -154 241 224 24 35 chr10 51168992 51169093 -94420195 - HSAT5 Satellite Satellite -1 99 1 359 205 0 12 chr10 51169323 51169422 -94419866 - HSAT5 Satellite Satellite -3 97 1 1998 162 26 26 chr10 51170240 51170629 -94418659 + L1MA8 LINE L1 5897 6285 -6 221 340 104 35 chr10 51170745 51170889 -94418399 - L2 LINE L2 -4 3268 3115 1158 167 138 21 chr10 51172365 51172605 -94416683 - AluJo SINE Alu -44 268 1 3923 144 43 86 chr10 51172606 51173189 -94416099 - Tigger1 DNA MER2_type -237 2181 1643 1839 136 28 11 chr10 51173189 51173476 -94415812 - AluSg SINE Alu -18 292 1 3923 144 43 86 chr10 51173476 51173731 -94415557 - Tigger1 DNA MER2_type -775 1643 1379 10816 58 3 39 chr10 51174728 51176154 -94413134 - SVA Other Other -8 1378 5 844 120 0 8 chr10 51176154 51176279 -94413009 + HERVH LTR ERV1 2185 2308 -5405 347 323 0 0 chr10 51177172 51177265 -94412023 + MER34 LTR ERV1 1 93 -449 398 237 116 97 chr10 51177472 51177702 -94411586 + LTR48B LTR ERV1 238 497 -147 185 0 40 0 chr10 51177702 51177727 -94411561 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 398 237 116 97 chr10 51177727 51177865 -94411423 + LTR48B LTR ERV1 497 631 -13 21 57 0 0 chr10 51178475 51178510 -94410778 + AT_rich Low_complexity Low_complexity 1 35 0 25 51 0 0 chr10 51178624 51178663 -94410625 + AT_rich Low_complexity Low_complexity 1 39 0 8127 60 11 0 chr10 51179544 51181309 -94407979 - L1PA4 LINE L1 0 6155 4385 1968 128 4 14 chr10 51181341 51181668 -94407620 - AluSc SINE Alu 0 324 1 198 269 215 11 chr10 51182478 51182571 -94406717 + MIR SINE MIR 42 153 -109 1149 312 136 12 chr10 51182583 51183228 -94406060 - L2 LINE L2 -1779 1535 811 325 214 29 29 chr10 51183444 51183514 -94405774 + MER21B LTR ERV1 20 89 -774 488 256 16 16 chr10 51183572 51183701 -94405587 + MER21B LTR ERV1 105 233 -630 1309 227 122 34 chr10 51183728 51184112 -94405176 + MER21B LTR ERV1 388 805 -58 383 240 45 65 chr10 51184130 51184284 -94405004 - L2 LINE L2 -2545 769 619 23 0 0 0 chr10 51184376 51184399 -94404889 + AT_rich Low_complexity Low_complexity 1 23 0 684 26 0 0 chr10 51184896 51185011 -94404277 + L1PA2 LINE L1 6056 6170 0 1746 159 0 4 chr10 51187673 51187943 -94401345 + AluSx SINE Alu 31 299 -13 1898 169 0 6 chr10 51188116 51188429 -94400859 - AluSx SINE Alu -1 311 1 253 300 0 0 chr10 51189766 51189826 -94399462 - MER117 DNA MER1_type -40 157 98 3682 55 13 0 chr10 51190032 51190483 -94398805 - L1PA4 LINE L1 -2 6153 5697 22 0 0 0 chr10 51190789 51190811 -94398477 + AT_rich Low_complexity Low_complexity 1 22 0 31560 52 3 1 chr10 51191840 51197976 -94391312 + L1PA4 LINE L1 1 6149 -6 228 122 0 0 chr10 51199109 51199150 -94390138 + (CA)n Simple_repeat Simple_repeat 1 41 0 182 232 29 0 chr10 51199155 51199224 -94390064 + (CATATA)n Simple_repeat Simple_repeat 4 74 0 1681 197 64 3 chr10 51199224 51199569 -94389719 + MER47A DNA MER2_type 1 366 0 2031 148 7 0 chr10 51199673 51199983 -94389305 + AluSx SINE Alu 1 312 0 234 287 11 23 chr10 51200134 51200221 -94389067 - MLT1L LTR MaLR -228 387 302 571 258 117 21 chr10 51200255 51200495 -94388793 + MER20B DNA MER1_type 119 381 -402 227 257 0 92 chr10 51200498 51200607 -94388681 - LTR33 LTR ERVL -8 513 415 288 306 108 25 chr10 51200925 51201285 -94388003 + MER20B DNA MER1_type 394 783 0 267 319 97 7 chr10 51201285 51201425 -94387863 - MLT1L LTR MaLR -460 155 3 225 373 112 12 chr10 51201896 51202057 -94387231 - L3 LINE CR1 -1215 362 186 425 322 63 0 chr10 51203766 51203940 -94385348 - MIR SINE MIR -24 238 54 477 309 100 39 chr10 51203973 51204203 -94385085 + MIR SINE MIR 2 245 -17 1051 173 53 4 chr10 51204821 51205046 -94384242 - L1MB3 LINE L1 -1 6182 5947 184 325 122 81 chr10 51205688 51206072 -94383216 - L2 LINE L2 -49 3223 2824 1207 128 0 6 chr10 51206682 51206854 -94382434 + AluY SINE Alu 127 297 -14 192 40 0 0 chr10 51207265 51207290 -94381998 + (CA)n Simple_repeat Simple_repeat 2 26 0 1826 165 3 75 chr10 51207783 51208158 -94381130 + MER7A DNA MER2_type 1 346 0 26 0 0 0 chr10 51209901 51209927 -94379361 + AT_rich Low_complexity Low_complexity 1 26 0 2040 43 16 0 chr10 51210077 51210332 -94378956 - L1PA4 LINE L1 0 6155 5897 1266 295 109 37 chr10 51212608 51214225 -94375063 + L1ME LINE L1 334 2137 -4124 2425 68 7 0 chr10 51214225 51214532 -94374756 + AluY SINE Alu 1 309 -2 1266 295 109 37 chr10 51214532 51214802 -94374486 + L1ME LINE L1 2137 2386 -3875 1177 260 105 38 chr10 51214838 51215834 -94373454 + L1ME LINE L1 2502 3603 -2477 3359 143 47 11 chr10 51215871 51216492 -94372796 - L1MB1 LINE L1 -188 5980 5338 505 275 39 22 chr10 51216510 51216692 -94372596 + L1ME LINE L1 3885 4069 -2011 243 119 24 24 chr10 51217689 51217731 -94371557 + MER5B DNA MER1_type 1 42 -136 2042 114 4 0 chr10 51218930 51219237 -94370051 + AluSc SINE Alu 8 315 0 804 308 80 3 chr10 51219993 51220282 -94369006 + LTR16A LTR ERVL 132 442 -8 1755 168 18 128 chr10 51221592 51222092 -94367196 - MER65A LTR ERV1 0 445 1 247 116 23 0 chr10 51222354 51222397 -94366891 - MADE1 DNA Mariner -3 77 34 836 141 7 0 chr10 51222811 51222960 -94366328 + L1PB1 LINE L1 6000 6149 -2 897 293 70 10 chr10 51223261 51223575 -94365713 + LTR40a LTR ERVL 2 334 -185 2855 229 43 12 chr10 51223582 51224013 -94365275 - L1 LINE L1 -1296 4850 4383 198 0 0 0 chr10 51224013 51224035 -94365253 + (TTTTC)n Simple_repeat Simple_repeat 2 23 0 2855 229 43 12 chr10 51224035 51224370 -94364918 - L1 LINE L1 -1763 4383 4060 1798 71 14 2 chr10 51224375 51224655 -94364633 + LTR14A LTR ERVK 1 344 0 606 119 20 0 chr10 51224655 51224756 -94364532 + HERVK14 LTR ERVK 1 103 -5842 * 12646 96 2 2 chr10 51224750 51226434 -94362854 + HERVK14 LTR ERVK 205 1891 -4054 2846 93 155 22 chr10 51226434 51226885 -94362403 + MER9 LTR ERVK 1 511 0 19062 95 16 23 chr10 51226885 51227646 -94361642 + HERVK9 LTR ERVK 1 766 -5150 181 250 0 83 chr10 51227646 51227706 -94361582 + MER5B DNA MER1_type 55 109 -69 19062 95 16 23 chr10 51227706 51229690 -94359598 + HERVK9 LTR ERVK 766 2786 -3130 1822 61 0 0 chr10 51229690 51229920 -94359368 + HERVK9 LTR ERVK 3711 3940 -1976 2045 130 3 9 chr10 51229921 51230245 -94359043 + HERVK9 LTR ERVK 4583 4904 -1012 1754 86 0 0 chr10 51230280 51230500 -94358788 + AluY SINE Alu 1 220 -91 2043 130 13 0 chr10 51230616 51230917 -94358371 + AluSp SINE Alu 1 305 -8 303 279 19 19 chr10 51231309 51231413 -94357875 + LTR49-int LTR ERV1 2417 2520 -3811 916 181 38 118 chr10 51231573 51231629 -94357659 + LTR16A-int LTR ERVL 311 370 -4973 411 21 0 0 chr10 51231629 51231677 -94357611 + (CA)n Simple_repeat Simple_repeat 1 48 0 2138 128 0 0 chr10 51231677 51231966 -94357322 - AluSx SINE Alu -23 289 1 916 181 38 118 chr10 51231966 51231983 -94357305 + LTR16A-int LTR ERVL 369 386 -4957 1920 178 0 0 chr10 51231983 51232286 -94357002 - AluSx SINE Alu -9 303 1 916 181 38 118 chr10 51232286 51232498 -94356790 + LTR16A-int LTR ERVL 386 575 -4768 1765 161 3 50 chr10 51232525 51232842 -94356446 - AluJb SINE Alu -8 304 3 2173 144 31 24 chr10 51232852 51233302 -94355986 + LTR49-int LTR ERV1 1010 1462 -6658 1431 193 58 7 chr10 51233328 51233603 -94355685 - AluJb SINE Alu -23 289 1 1331 171 0 73 chr10 51233768 51234043 -94355245 - AluJb SINE Alu -20 292 38 191 250 50 0 chr10 51234066 51234126 -94355162 + MIR SINE MIR 198 260 -2 1598 229 78 44 chr10 51235138 51235641 -94353647 + L1MB8 LINE L1 5653 6172 -6 436 312 51 13 chr10 51236713 51236870 -94352418 + L2 LINE L2 2722 2884 -430 973 240 40 14 chr10 51237591 51237866 -94351422 - L1MB7 LINE L1 0 6184 5903 22 0 0 0 chr10 51240840 51240862 -94348426 + AT_rich Low_complexity Low_complexity 1 22 0 524 279 88 20 chr10 51240933 51241181 -94348107 - L1MB7 LINE L1 -478 5643 5396 1998 154 0 3 chr10 51241295 51241606 -94347682 + AluSq SINE Alu 1 310 -3 29 60 0 0 chr10 51241790 51241840 -94347448 + AT_rich Low_complexity Low_complexity 1 50 0 584 106 24 0 chr10 51243605 51243690 -94345598 - L1PA5 LINE L1 -2 6152 6066 25 0 0 0 chr10 51245697 51245722 -94343566 + AT_rich Low_complexity Low_complexity 1 25 0 1253 262 31 3 chr10 51246421 51246715 -94342573 + AluJo SINE Alu 1 302 -10 203 225 0 0 chr10 51246936 51246976 -94342312 - L2 LINE L2 -12 3301 3262 1902 163 7 0 chr10 51247257 51247558 -94341730 - AluSx SINE Alu -9 303 1 1944 141 10 0 chr10 51248017 51248308 -94340980 - AluSp SINE Alu -18 295 2 1919 155 0 0 chr10 51250080 51250376 -94338912 + AluSx SINE Alu 6 301 -11 259 171 195 12 chr10 51253575 51253657 -94335631 + MER5A DNA MER1_type 10 106 -83 2306 87 3 3 chr10 51254508 51254806 -94334482 - AluY SINE Alu -13 298 1 1313 240 0 24 chr10 51255001 51255297 -94333991 - AluJo SINE Alu -23 289 1 1476 213 0 7 chr10 51255331 51255613 -94333675 + AluJo SINE Alu 3 282 -30 6515 60 1 1 chr10 51255998 51256776 -94332512 + L1PA5 LINE L1 5376 6153 -1 1077 234 30 54 chr10 51257148 51257443 -94331845 + AluJb SINE Alu 13 300 -12 1889 152 0 21 chr10 51257614 51257926 -94331362 - AluSx SINE Alu 0 306 1 625 202 0 0 chr10 51258179 51258278 -94331010 - FLAM_A SINE Alu -43 99 1 22 35 0 0 chr10 51259584 51259613 -94329675 + AT_rich Low_complexity Low_complexity 1 29 0 207 339 71 9 chr10 51260621 51260733 -94328555 + MIR SINE MIR 23 141 -121 668 219 0 24 chr10 51261716 51261839 -94327449 + FLAM_A SINE Alu 6 125 -17 423 0 0 0 chr10 51261873 51261920 -94327368 + (TTG)n Simple_repeat Simple_repeat 2 48 0 711 136 52 39 chr10 51262310 51262464 -94326824 - MER21A LTR ERV1 -29 902 747 757 172 45 0 chr10 51262470 51262604 -94326684 + Tigger7 DNA MER2_type 2348 2487 0 2497 151 5 43 chr10 51263629 51264066 -94325222 + L1MC1 LINE L1 5914 6333 0 2113 136 0 0 chr10 51264073 51264368 -94324920 + AluSx SINE Alu 1 295 -17 201 169 0 77 chr10 51264400 51264434 -94324854 + A-rich Low_complexity Low_complexity 3 31 -31 1955 156 3 0 chr10 51264434 51264723 -94324565 + AluSq SINE Alu 1 290 -23 201 169 0 77 chr10 51264723 51264753 -94324535 + A-rich Low_complexity Low_complexity 31 62 0 24 0 0 0 chr10 51264864 51264888 -94324400 + AT_rich Low_complexity Low_complexity 1 24 0 21 57 0 0 chr10 51265222 51265257 -94324031 + AT_rich Low_complexity Low_complexity 1 35 0 1021 130 31 0 chr10 51265290 51265451 -94323837 + MER68 LTR ERV1 1 166 -396 1231 137 127 50 chr10 51267366 51267665 -94321623 - MER33 DNA MER1_type -2 322 1 22 0 0 0 chr10 51267820 51267842 -94321446 + AT_rich Low_complexity Low_complexity 1 22 0 272 124 22 40 chr10 51268176 51268254 -94321034 + FLAM SINE Alu 74 117 -16 36 23 0 0 chr10 51268299 51268342 -94320946 + AT_rich Low_complexity Low_complexity 1 43 0 1388 186 30 58 chr10 51269224 51269625 -94319663 - MLT2B3 LTR ERVL 0 554 176 2398 128 108 11 chr10 51269642 51270175 -94319113 + SATR1 Satellite Satellite 1 585 0 2076 182 115 16 chr10 51270203 51271411 -94317877 - SATR1 Satellite Satellite 0 1709 50 2341 72 3 0 chr10 51271411 51271703 -94317585 + AluY SINE Alu 1 293 -18 2076 182 115 16 chr10 51271703 51271759 -94317529 - SATR1 Satellite Satellite -1659 50 1 230 190 17 0 chr10 51274453 51274511 -94314777 + (TA)n Simple_repeat Simple_repeat 2 60 0 1749 204 121 5 chr10 51274677 51275157 -94314131 - SATR1 Satellite Satellite 0 535 1 2005 182 98 33 chr10 51275188 51276266 -94313022 + SATR1 Satellite Satellite 1 1147 -1 2181 176 123 11 chr10 51276284 51277003 -94312285 + SATR1 Satellite Satellite 1 799 0 2459 169 113 7 chr10 51277029 51278531 -94310757 - SATR1 Satellite Satellite -110 1661 1 1371 188 85 0 chr10 51278531 51278879 -94310409 + L1P4 LINE L1 4964 5337 -829 427 125 411 0 chr10 51278879 51278991 -94310297 + LTR1B LTR ERV1 427 584 -242 1088 149 53 0 chr10 51278996 51279184 -94310104 + L1P4 LINE L1 5347 5544 -621 1560 137 53 15 chr10 51279184 51279446 -94309842 + LTR1B LTR ERV1 1 272 -554 237 273 0 15 chr10 51280394 51280460 -94308828 + L1MA8 LINE L1 6152 6216 -75 * 584 216 26 33 chr10 51280447 51280600 -94308688 + L1M3 LINE L1 5442 5593 -587 * 6627 227 17 103 chr10 51280591 51282246 -94307042 + L1P LINE L1 2873 4424 -1722 1178 140 0 0 chr10 51282246 51282424 -94306864 + AluSp SINE Alu 136 313 0 6627 227 17 103 chr10 51282424 51283158 -94306130 + L1P LINE L1 4424 5219 -927 458 94 7 67 chr10 51283178 51283327 -94305961 + (CCCTAA)n Simple_repeat Simple_repeat 1 140 0 293 131 0 48 chr10 51283366 51283450 -94305838 + (CCCTAA)n Simple_repeat Simple_repeat 4 83 0 3342 167 6 6 chr10 51283590 51284226 -94305062 - TAR1 Satellite telomeric -43 2068 1433 1362 138 56 14 chr10 51284216 51287195 -94302093 + GSATII Satellite centromeric 1 3101 -64 * 343 181 56 104 chr10 51287208 51287352 -94301936 + L1MB8 LINE L1 6000 6136 -42 468 215 0 0 chr10 51288047 51288213 -94301075 - ACRO1 Satellite acromeric -6 166 1 214 96 19 19 chr10 51288313 51288365 -94300923 + (CAAAAA)n Simple_repeat Simple_repeat 3 54 0 347 307 102 53 chr10 51288368 51288818 -94300470 + L1 LINE L1 3027 3498 -2648 900 227 76 18 chr10 51289207 51289484 -94299804 + LTR49-int LTR ERV1 3729 4021 -2577 285 198 113 63 chr10 51289471 51289533 -94299755 + LTR49-int LTR ERV1 4585 4642 -2895 * 1724 190 7 3 chr10 51289533 51289843 -94299445 + AluJb SINE Alu 1 311 -1 285 198 113 63 chr10 51289843 51289951 -94299337 + LTR49-int LTR ERV1 4642 4743 -2794 2032 148 7 0 chr10 51289951 51290248 -94299040 - AluSx SINE Alu -13 299 1 285 198 113 63 chr10 51290248 51290359 -94298929 + LTR49-int LTR ERV1 4743 4967 -2570 * 4023 169 34 98 chr10 51290349 51290668 -94298620 + LTR49-int LTR ERV1 4283 4621 -1710 1636 191 7 10 chr10 51290668 51290962 -94298326 + AluJb SINE Alu 2 294 -18 4023 169 34 98 chr10 51290962 51291747 -94297541 + LTR49-int LTR ERV1 4621 5317 -1014 641 130 0 0 chr10 51291751 51291843 -94297445 + L1P3 LINE L1 5 96 -6365 * 8866 140 24 11 chr10 51291819 51293333 -94295955 + L1P3 LINE L1 1135 2668 -3793 205 245 0 20 chr10 51293542 51293573 -94295715 + (CA)n Simple_repeat Simple_repeat 2 33 -16 1968 128 7 3 chr10 51293573 51293861 -94295427 - AluSx SINE Alu -23 289 1 205 245 0 20 chr10 51293861 51293878 -94295410 + (CA)n Simple_repeat Simple_repeat 33 49 0 1949 174 0 0 chr10 51293878 51294182 -94295106 - AluSx SINE Alu -8 304 1 760 207 56 47 chr10 51294182 51294395 -94294893 + LTR57-int LTR ERVL 361 575 -4768 1748 164 3 50 chr10 51294422 51294739 -94294549 - AluJb SINE Alu -8 304 3 2632 176 52 69 chr10 51294749 51295225 -94294063 + LTR49-int LTR ERV1 1010 1493 -4838 1400 193 74 4 chr10 51295225 51295495 -94293793 - AluJb SINE Alu -23 289 1 2632 176 52 69 chr10 51295495 51295583 -94293705 + LTR49-int LTR ERV1 1493 1581 -4750 2145 107 0 7 chr10 51295583 51295872 -94293416 + AluSq SINE Alu 3 289 -24 2632 176 52 69 chr10 51295872 51296461 -94292827 + LTR49-int LTR ERV1 1581 3853 -2478 964 217 76 18 chr10 51296717 51296994 -94292294 + LTR49-int LTR ERV1 3729 4021 -2577 * 3891 203 48 92 chr10 51296981 51297049 -94292239 + LTR49-int LTR ERV1 3302 3371 -2960 1702 201 3 0 chr10 51297049 51297353 -94291935 + AluJb SINE Alu 7 311 -1 3891 203 48 92 chr10 51297353 51297461 -94291827 + LTR49-int LTR ERV1 3371 3482 -2849 1990 153 7 0 chr10 51297461 51297755 -94291533 - AluSx SINE Alu -16 296 1 3891 203 48 92 chr10 51297755 51298175 -94291113 + LTR49-int LTR ERV1 3482 3919 -2412 1648 188 7 10 chr10 51298175 51298467 -94290821 + AluJb SINE Alu 2 292 -20 3891 203 48 92 chr10 51298467 51299252 -94290036 + LTR49-int LTR ERV1 3919 5318 -1013 641 130 0 0 chr10 51299255 51299347 -94289941 + L1PA7 LINE L1 5 96 -6365 * 15006 105 13 3 chr10 51299323 51304536 -94284752 + L1PA7 LINE L1 1135 6464 -5 2164 130 63 5 chr10 51304550 51304945 -94284343 + LTR49-int LTR ERV1 4427 4690 -433 3033 161 42 8 chr10 51305721 51306248 -94283040 + MER52A LTR ERV1 1211 1755 0 8082 206 43 24 chr10 51306248 51306894 -94282394 - L1MA3 LINE L1 -297 6008 5376 1464 215 55 3 chr10 51306894 51307187 -94282101 - AluJb SINE Alu -4 308 1 8082 206 43 24 chr10 51307187 51307613 -94281675 - L1MA3 LINE L1 -929 5376 4960 1811 108 8 11 chr10 51307613 51307873 -94281415 + AluY SINE Alu 36 294 -17 8082 206 43 24 chr10 51307873 51309264 -94280024 - L1MA3 LINE L1 -1345 4960 3378 2216 117 13 0 chr10 51309264 51309572 -94279716 - AluSx SINE Alu 0 312 1 8082 206 43 24 chr10 51309572 51309995 -94279293 - L1MA3 LINE L1 -2927 3378 2965 2096 122 16 19 chr10 51309998 51310310 -94278978 - AluY SINE Alu 0 311 1 317 226 24 24 chr10 51310337 51310421 -94278867 + LTR45 LTR ERV1 442 525 0 851 271 56 0 chr10 51310425 51310746 -94278542 + L1M4 LINE L1 4133 4471 -1675 759 247 51 36 chr10 51311286 51311622 -94277666 - MER66A LTR ERV1 -40 438 98 1783 226 90 7 chr10 51311812 51311932 -94277356 - L1 LINE L1 -2593 3553 3444 2224 117 13 0 chr10 51311932 51312240 -94277048 - AluSx SINE Alu 0 312 1 1783 226 90 7 chr10 51312240 51312664 -94276624 - L1 LINE L1 -2702 3444 2964 2259 96 13 19 chr10 51312666 51312979 -94276309 - AluY SINE Alu 0 311 1 356 223 21 21 chr10 51312996 51313090 -94276198 + LTR45 LTR ERV1 432 525 0 857 279 53 0 chr10 51313094 51313416 -94275872 + L1M4 LINE L1 4133 4471 -1675 1039 211 42 63 chr10 51313956 51314335 -94274953 - MER66A LTR ERV1 -40 438 68 2280 89 3 0 chr10 51315419 51315710 -94273578 + AluSg SINE Alu 1 292 -18 338 252 37 65 chr10 51317255 51317504 -94271784 - MLT1H LTR MaLR 0 549 311 3899 131 5 9 chr10 51319254 51319817 -94269471 - LTR6A LTR ERV1 0 564 4 2266 165 90 2 chr10 51319901 51320300 -94268988 - MER57B LTR ERV1 0 434 1 1403 135 131 0 chr10 51320300 51320529 -94268759 - MER57B-int LTR ERV1 0 7537 7279 741 115 23 31 chr10 51320529 51320659 -94268629 - LTR54B LTR ERV1 -367 131 3 2187 113 0 0 chr10 51320674 51320967 -94268321 + AluY SINE Alu 1 293 -18 702 154 9 0 chr10 51320967 51321077 -94268211 - MER57B-int LTR ERV1 -395 7142 7032 2485 136 59 10 chr10 51321238 51321644 -94267644 - MER57B-int LTR ERV1 -451 7086 6661 * 6507 116 22 17 chr10 51321636 51322590 -94266698 - MER57B-int LTR ERV1 -1349 6188 5227 2298 110 7 0 chr10 51322590 51322889 -94266399 - AluSx SINE Alu -11 301 1 6507 116 22 17 chr10 51322889 51322918 -94266370 - MER57B-int LTR ERV1 -2310 5227 5200 6387 146 60 64 chr10 51323038 51323580 -94265708 - MER52A-int LTR ERV1 -1760 5777 5234 2226 121 7 0 chr10 51323580 51323877 -94265411 - AluSx SINE Alu -13 299 1 6387 146 60 64 chr10 51323877 51324178 -94265110 - MER52A-int LTR ERV1 -2303 5234 4933 2032 136 3 0 chr10 51324178 51324464 -94264824 + AluSq SINE Alu 5 291 -22 6387 146 60 64 chr10 51324464 51324519 -94264769 - MER52A-int LTR ERV1 -2604 4933 4879 2148 108 10 0 chr10 51324519 51324815 -94264473 + AluY SINE Alu 1 299 -12 6387 146 60 64 chr10 51324815 51325349 -94263939 - MER52A-int LTR ERV1 -2658 4879 4349 2121 124 3 3 chr10 51325351 51325658 -94263630 - AluSp SINE Alu -6 307 1 4134 130 36 36 chr10 51325686 51326602 -94262686 - MER52A-int LTR ERV1 -4942 1004 88 4138 158 44 20 chr10 51326602 51327336 -94261952 - MER52A LTR ERV1 0 1755 1005 1711 225 278 0 chr10 51327341 51327856 -94261432 - MER52A LTR ERV1 -1097 658 1 2479 124 15 105 chr10 51327995 51328472 -94260816 - MER57B LTR ERV1 0 434 1 2167 117 10 0 chr10 51328868 51329175 -94260113 - AluSp SINE Alu -3 310 1 700 241 140 76 chr10 51329900 51330407 -94258881 - MLT1H1 LTR MaLR -1 589 1 180 179 0 0 chr10 51331040 51331079 -94258209 + T-rich Low_complexity Low_complexity 1 39 0 311 239 150 77 chr10 51331508 51332012 -94257276 - MLT1G LTR MaLR 0 590 3 314 229 173 59 chr10 51332511 51333016 -94256272 - MLT1F1 LTR MaLR 0 590 3 1423 237 125 56 chr10 51333042 51333820 -94255468 - L1MEc LINE L1 -3212 3003 2189 1790 184 10 3 chr10 51333820 51334130 -94255158 - AluJb SINE Alu 0 312 1 1423 237 125 56 chr10 51334130 51334208 -94255080 - L1MEc LINE L1 -4026 2189 2118 1157 241 123 47 chr10 51334315 51335040 -94254248 - L1MDa LINE L1 -3264 3276 2468 1765 177 10 3 chr10 51335040 51335339 -94253949 - AluJb SINE Alu -8 304 4 1157 241 123 47 chr10 51335339 51335450 -94253838 - L1MDa LINE L1 -4072 2468 2367 1646 175 7 17 chr10 51335450 51335741 -94253547 + AluJb SINE Alu 1 288 -24 26 0 0 0 chr10 51335745 51335771 -94253517 + AT_rich Low_complexity Low_complexity 1 26 0 1260 218 188 25 chr10 51335773 51336096 -94253192 - L1MB4 LINE L1 -6 6454 6185 347 32 48 16 chr10 51336096 51336158 -94253130 + (TA)n Simple_repeat Simple_repeat 2 65 0 1260 218 188 25 chr10 51336158 51336584 -94252704 - L1MB4 LINE L1 -275 6185 5561 3509 235 55 53 chr10 51337615 51337677 -94251611 - L1MB4 LINE L1 -861 5565 5505 1243 158 110 0 chr10 51337677 51337886 -94251402 + MER46A DNA MER2_type 2 233 -3 3509 235 55 53 chr10 51337886 51338691 -94250597 - L1MB4 LINE L1 -921 5505 4703 1885 138 0 7 chr10 51338691 51338989 -94250299 - AluSx SINE Alu -16 296 1 3509 235 55 53 chr10 51338989 51339054 -94250234 - L1MB4 LINE L1 -1723 4703 4640 1674 166 16 50 chr10 51339054 51339373 -94249915 - AluSq SINE Alu -5 308 1 3509 235 55 53 chr10 51339373 51339802 -94249486 - L1MB4 LINE L1 -1786 4640 4215 1683 253 58 14 chr10 51339797 51340457 -94248831 - L1MB4 LINE L1 -2468 3958 3270 * 233 227 30 0 chr10 51340460 51340526 -94248762 - L1MB4 LINE L1 -3096 3330 3263 * 424 227 31 8 chr10 51340522 51340650 -94248638 - L1MB4 LINE L1 -3096 3330 3200 2058 110 0 38 chr10 51340781 51341098 -94248190 + AluSx SINE Alu 1 305 -7 37 0 0 0 chr10 51341223 51341260 -94248028 + AT_rich Low_complexity Low_complexity 1 37 0 1985 133 3 0 chr10 51341260 51341553 -94247735 + AluSx SINE Alu 2 295 -17 2000 97 14 0 chr10 51341557 51341859 -94247429 + AluY SINE Alu 3 308 0 248 156 22 0 chr10 51341860 51341905 -94247383 - L1MA10 LINE L1 -19 6315 6270 351 0 0 0 chr10 51341907 51341946 -94247342 + (TG)n Simple_repeat Simple_repeat 2 40 0 1661 102 8 8 chr10 51341953 51342197 -94247091 - AluSq SINE Alu -38 275 32 2266 79 3 0 chr10 51342376 51342667 -94246621 + AluY SINE Alu 1 292 -19 254 164 0 18 chr10 51342673 51342728 -94246560 - L1MB1 LINE L1 -15 6153 6100 11766 159 59 39 chr10 51342734 51342948 -94246340 - Tigger1 DNA MER2_type -4 2414 2206 1219 179 120 36 chr10 51342948 51343222 -94246066 - AluJo SINE Alu -5 297 1 11766 159 59 39 chr10 51343222 51343807 -94245481 - Tigger1 DNA MER2_type -212 2206 1634 1746 127 34 14 chr10 51343807 51344099 -94245189 - AluSg SINE Alu -12 298 1 11766 159 59 39 chr10 51344099 51344950 -94244338 - Tigger1 DNA MER2_type -784 1634 701 2210 100 0 10 chr10 51344950 51345260 -94244028 + AluSp SINE Alu 1 307 -6 11766 159 59 39 chr10 51345260 51345975 -94243313 - Tigger1 DNA MER2_type -1717 701 1 1578 163 48 19 chr10 51345975 51346349 -94242939 - L1MB4 LINE L1 -3938 2488 2104 286 146 52 52 chr10 51346353 51346449 -94242839 - L1MCa LINE L1 -4227 2199 2104 * 3605 192 102 78 chr10 51346448 51347896 -94241392 - L1MCa LINE L1 -4221 2205 723 767 197 7 0 chr10 51347898 51348035 -94241253 - MLT1A1 LTR MaLR -2 363 226 * 806 95 3 4 chr10 51348026 51349568 -94239720 - CER Satellite Satellite 0 1541 1 620 206 28 111 chr10 51349670 51349922 -94239366 - L1MB8 LINE L1 -108 6070 5840 645 76 0 0 chr10 51349980 51350072 -94239216 + (TTCC)n Simple_repeat Simple_repeat 4 95 0 275 254 0 0 chr10 51350374 51350429 -94238859 - Tigger5 DNA MER2_type -2268 55 1 1843 92 70 0 chr10 51350817 51351088 -94238200 + L1PA10 LINE L1 5863 6152 -16 1483 241 161 7 chr10 51351290 51351751 -94237537 - MER21B LTR ERV1 -133 730 199 240 281 31 0 chr10 51352003 51352067 -94237221 - MER5A DNA MER1_type -6 183 118 282 29 0 0 chr10 51352495 51352530 -94236758 + (TCTG)n Simple_repeat Simple_repeat 2 36 0 324 111 0 0 chr10 51352579 51352633 -94236655 + (CA)n Simple_repeat Simple_repeat 1 54 0 645 199 0 0 chr10 51353057 51353313 -94235975 + ACRO1 Satellite acromeric 1 256 -38 1140 125 4 2 chr10 51353645 51355054 -94234234 + ACRO1 Satellite acromeric 1 1410 -55 708 207 36 116 chr10 51355744 51356073 -94233215 - L1MB8 LINE L1 -36 6142 5840 681 73 0 0 chr10 51356131 51356227 -94233061 + (TTCC)n Simple_repeat Simple_repeat 4 99 0 275 254 0 0 chr10 51356529 51356584 -94232704 - Tigger5 DNA MER2_type -2268 55 1 1862 104 66 0 chr10 51356972 51357259 -94232029 + L1PA10 LINE L1 5863 6168 0 917 227 103 7 chr10 51357445 51357906 -94231382 - MER21B LTR ERV1 -133 730 199 262 266 31 0 chr10 51358158 51358222 -94231066 - MER5A DNA MER1_type -6 183 118 462 18 0 0 chr10 51358648 51358703 -94230585 + (TCTG)n Simple_repeat Simple_repeat 2 56 0 404 91 15 0 chr10 51358745 51358811 -94230477 + (CA)n Simple_repeat Simple_repeat 1 67 0 653 194 0 0 chr10 51359232 51359477 -94229811 + ACRO1 Satellite acromeric 1 245 -49 1125 119 2 2 chr10 51359820 51361671 -94227617 + ACRO1 Satellite acromeric 1 1851 -55 367 173 60 107 chr10 51362361 51362511 -94226777 - L1MB8 LINE L1 -36 6142 6000 1460 132 47 18 chr10 51362524 51364017 -94225271 - GSATII Satellite centromeric -8 3138 1690 216 0 0 0 chr10 51364017 51364041 -94225247 + (TA)n Simple_repeat Simple_repeat 2 25 0 1460 132 47 18 chr10 51364041 51365574 -94223714 - GSATII Satellite centromeric -1456 1690 1 * 3226 166 8 8 chr10 51365564 51366171 -94223117 + TAR1 Satellite telomeric 1462 2068 -43 293 131 0 48 chr10 51366311 51366395 -94222893 + (TTAGGG)n Simple_repeat Simple_repeat 4 83 0 484 107 6 65 chr10 51366434 51366602 -94222686 + (TTAGGG)n Simple_repeat Simple_repeat 1 158 0 6745 221 21 102 chr10 51366603 51367344 -94221944 - L1P LINE L1 -927 5219 4419 1114 140 0 0 chr10 51367344 51367522 -94221766 - AluSp SINE Alu 0 313 136 6745 221 21 102 chr10 51367522 51368871 -94220417 - L1P LINE L1 -1727 4419 3181 225 0 0 0 chr10 51368871 51368896 -94220392 + (TTG)n Simple_repeat Simple_repeat 3 27 0 6745 221 21 102 chr10 51368896 51369182 -94220106 - L1P LINE L1 -2965 3181 2873 631 209 32 32 chr10 51369167 51369325 -94219963 - L1M3 LINE L1 -581 5599 5442 * 234 273 0 15 chr10 51369312 51369378 -94219910 - L1MA8 LINE L1 -75 6216 6152 * 6018 231 65 26 chr10 51370507 51372922 -94216366 - L1M3 LINE L1 -570 5610 3095 536 228 0 0 chr10 51373466 51373567 -94215721 - AluJ/FLAM SINE Alu -210 102 2 1564 209 18 6 chr10 51373575 51373914 -94215374 - L1M3 LINE L1 -361 5822 5480 1600 156 6 52 chr10 51374075 51374401 -94214887 + AluSx SINE Alu 1 311 -1 2033 120 0 3 chr10 51374556 51374848 -94214440 - AluSx SINE Alu -21 291 1 2433 251 56 51 chr10 51375391 51375676 -94213612 - MER21B LTR ERV1 -57 806 524 1557 194 3 10 chr10 51375676 51375970 -94213318 - AluJo SINE Alu -12 300 9 2433 251 56 51 chr10 51375970 51376048 -94213240 - MER21B LTR ERV1 -339 524 448 1247 183 0 102 chr10 51376048 51376382 -94212906 + AluJb SINE Alu 2 301 -11 2433 251 56 51 chr10 51376382 51376801 -94212487 - MER21B LTR ERV1 -415 448 19 239 311 14 0 chr10 51376822 51376896 -94212392 - MER21B LTR ERV1 -773 90 16 1320 224 7 13 chr10 51376896 51377199 -94212089 - AluJo SINE Alu -11 301 1 532 213 15 22 chr10 51377201 51377337 -94211951 - FLAM_C SINE Alu 0 143 9 1510 190 22 60 chr10 51377340 51377708 -94211580 + MLT1D LTR MaLR 150 503 -2 400 254 0 0 chr10 51377711 51377804 -94211484 + AluJ/FLAM SINE Alu 11 93 -209 550 254 8 0 chr10 51377806 51377928 -94211360 + AluJo/FRAM SINE Alu 182 304 -8 1069 262 105 14 chr10 51377939 51378456 -94210832 - L2 LINE L2 -218 3095 2541 688 223 0 0 chr10 51378547 51378677 -94210611 + FLAM_C SINE Alu 1 130 -3 941 219 4 21 chr10 51378741 51378983 -94210305 + AluJo SINE Alu 49 286 -26 21 0 0 0 chr10 51379125 51379146 -94210142 + AT_rich Low_complexity Low_complexity 1 21 0 237 208 9 94 chr10 51379147 51379253 -94210035 + LTR37A LTR ERV1 241 337 -89 1836 159 3 0 chr10 51379455 51379757 -94209531 - AluSg SINE Alu -7 303 1 1459 191 3 24 chr10 51380061 51380359 -94208929 - AluJo SINE Alu -10 302 11 1801 162 0 7 chr10 51380374 51380677 -94208611 - AluSx SINE Alu -6 306 6 483 182 0 98 chr10 51380697 51380760 -94208528 - L1MB8 LINE L1 -5 6173 6128 1340 233 0 0 chr10 51380760 51381065 -94208223 + AluJb SINE Alu 1 305 -7 483 182 0 98 chr10 51381065 51381133 -94208155 - L1MB8 LINE L1 -50 6128 6055 1023 236 5 0 chr10 51381227 51381443 -94207845 - L1MB8 LINE L1 -411 5773 5557 475 272 0 0 chr10 51381445 51381559 -94207729 + FLAM_C SINE Alu 2 115 -28 388 206 14 0 chr10 51381594 51381667 -94207621 - L1MB8 LINE L1 -598 5568 5495 1441 214 3 7 chr10 51381667 51381961 -94207327 - AluJb SINE Alu -19 293 1 532 110 44 11 chr10 51382237 51382328 -94206960 - L1PB1 LINE L1 -2 6149 6056 28 48 0 0 chr10 51382332 51382374 -94206914 + AT_rich Low_complexity Low_complexity 1 42 0 1861 142 7 0 chr10 51382629 51382949 -94206339 - AluSx SINE Alu 0 322 1 3130 235 108 26 chr10 51383843 51384282 -94205006 + L1MC4 LINE L1 2757 3159 -4649 1839 140 3 3 chr10 51384282 51384574 -94204714 + AluSx SINE Alu 1 292 -20 3130 235 108 26 chr10 51384574 51385840 -94203448 + L1MC4 LINE L1 3159 7618 -190 1596 173 50 3 chr10 51385842 51386187 -94203101 + Tigger5 DNA MER2_type 1 2322 -1 555 279 40 64 chr10 51386188 51386233 -94203055 + L1M4 LINE L1 3572 3617 -2529 2219 119 3 3 chr10 51386233 51386544 -94202744 + AluSp SINE Alu 1 311 -2 555 279 40 64 chr10 51386544 51386796 -94202492 + L1M4 LINE L1 3617 3862 -2284 353 189 40 0 chr10 51386804 51386878 -94202410 + L1ME1 LINE L1 6086 6162 -4 25 65 0 0 chr10 51387845 51387891 -94201397 + AT_rich Low_complexity Low_complexity 1 46 0 259 318 90 23 chr10 51388062 51388361 -94200927 - L1ME4a LINE L1 -157 5964 5646 3967 138 6 8 chr10 51388380 51389003 -94200285 - L1PA15 LINE L1 0 6165 5544 2970 189 59 27 chr10 51389006 51389760 -94199528 - LTR1B LTR ERV1 0 785 1 1135 133 53 0 chr10 51389760 51389948 -94199340 - L1PA15 LINE L1 -621 5544 5347 438 116 411 0 chr10 51389953 51390065 -94199223 - LTR1B LTR ERV1 -242 584 427 1372 186 85 0 chr10 51390065 51390413 -94198875 - L1PA15 LINE L1 -829 5337 4964 2539 166 118 8 chr10 51390413 51392515 -94196773 - SATR1 Satellite Satellite -47 2333 1 1950 185 103 28 chr10 51392533 51393610 -94195678 + SATR1 Satellite Satellite 1 1158 -3 1842 195 121 4 chr10 51393641 51394120 -94195168 + SATR1 Satellite Satellite 1 535 -105 248 183 17 0 chr10 51394286 51394346 -94194942 + (TA)n Simple_repeat Simple_repeat 2 62 0 720 199 0 33 chr10 51395008 51395159 -94194129 - AluJo SINE Alu -161 151 6 639 0 0 0 chr10 51395970 51396041 -94193247 + (TA)n Simple_repeat Simple_repeat 1 71 0 412 248 0 0 chr10 51397640 51397741 -94191547 - L1MA9 LINE L1 -49 6263 6163 1593 148 0 4 chr10 51398694 51398937 -94190351 - AluSg SINE Alu -12 298 57 398 108 0 46 chr10 51399101 51399166 -94190122 + Alu SINE Alu 239 300 0 1836 166 17 0 chr10 51399344 51399646 -94189642 + AluSx SINE Alu 1 307 -5 3956 192 29 31 chr10 51399682 51400829 -94188459 + L1PA16 LINE L1 5026 6165 -1 2138 127 3 0 chr10 51400979 51401271 -94188017 - AluSc SINE Alu -16 293 1 21 0 0 0 chr10 51401633 51401654 -94187634 + AT_rich Low_complexity Low_complexity 1 21 0 211 259 25 49 chr10 51402279 51402360 -94186928 + L2 LINE L2 2967 3045 -227 809 218 39 21 chr10 51403219 51403453 -94185835 - L1MC4 LINE L1 -668 7374 7137 782 239 28 0 chr10 51403495 51403675 -94185613 - L1MC4 LINE L1 -1039 7003 6819 294 241 0 41 chr10 51404274 51404446 -94184842 - HSAT5 Satellite Satellite -1 164 1 273 262 0 12 chr10 51404640 51404724 -94184564 - HSAT5 Satellite Satellite -1 85 3 246 193 0 0 chr10 51405207 51405264 -94184024 + (CA)n Simple_repeat Simple_repeat 2 58 0 2064 108 103 40 chr10 51405507 51405935 -94183353 - SN5 Other centromeric 0 455 1 1383 242 90 6 chr10 51407951 51408306 -94180982 + MSTA LTR MaLR 1 385 -43 1245 191 13 0 chr10 51408317 51408552 -94180736 + MSTA-int LTR MaLR 13 250 -1401 1292 151 34 17 chr10 51408559 51408797 -94180491 + MSTA-int LTR MaLR 1410 1651 0 1321 244 29 32 chr10 51408797 51409174 -94180114 + MSTA LTR MaLR 1 376 -52 402 238 73 13 chr10 51409189 51409341 -94179947 - THE1-int LTR MaLR -959 670 490 304 281 0 0 chr10 51409338 51409420 -94179868 + MSTA-int LTR MaLR 28 109 -1542 * 722 226 226 22 chr10 51409609 51409835 -94179453 - THE1-int LTR MaLR -402 1178 907 1128 217 59 21 chr10 51409839 51410129 -94179159 + MSTA LTR MaLR 76 376 -52 542 183 176 0 chr10 51410163 51410294 -94178994 - MST-int LTR MaLR -990 661 508 5633 241 60 20 chr10 51410297 51411855 -94177433 + MSTA-int LTR MaLR 32 1651 0 369 219 42 34 chr10 51411855 51411974 -94177314 + MSTA LTR MaLR 1 120 -308 375 200 18 73 chr10 51412038 51412148 -94177140 + MSTA LTR MaLR 56 159 -269 1357 214 9 46 chr10 51412155 51412500 -94176788 + MSTA-int LTR MaLR 1318 1649 -2 452 188 21 10 chr10 51412502 51412598 -94176690 + MSTA LTR MaLR 1 97 -331 201 239 15 30 chr10 51412600 51412667 -94176621 + (GGGTG)n Simple_repeat Simple_repeat 5 70 0 237 196 36 0 chr10 51412682 51412738 -94176550 + THE1-int LTR MaLR 911 968 -612 * 706 224 195 25 chr10 51412728 51412969 -94176319 - THE1-int LTR MaLR -392 1188 907 1076 229 60 4 chr10 51412993 51413259 -94176029 + MSTA LTR MaLR 96 376 -52 460 222 170 0 chr10 51413294 51413429 -94175859 - MST-int LTR MaLR -990 661 504 * 5939 224 50 31 chr10 51413424 51414949 -94174339 + MSTA-int LTR MaLR 28 1580 -71 228 179 0 0 chr10 51414952 51414991 -94174297 + MST-int LTR MaLR 623 661 -990 319 177 0 32 chr10 51415025 51415087 -94174201 - MSTA LTR MaLR -52 376 317 384 169 13 0 chr10 51415089 51415166 -94174122 + MST-int LTR MaLR 1574 1651 0 403 237 10 0 chr10 51415168 51415265 -94174023 + MSTA LTR MaLR 3 100 -328 338 252 107 0 chr10 51415310 51415413 -94173875 + MSTA LTR MaLR 58 171 -257 1495 195 3 41 chr10 51415416 51415759 -94173529 + MSTA-int LTR MaLR 1322 1651 0 473 183 21 11 chr10 51415762 51415855 -94173433 + MSTA LTR MaLR 4 97 -331 246 232 18 0 chr10 51415940 51415996 -94173292 + THE1-int LTR MaLR 911 967 -613 * 684 220 233 22 chr10 51415988 51416220 -94173068 - THE1-int LTR MaLR -393 1187 907 973 224 72 19 chr10 51416247 51416510 -94172778 + MSTA LTR MaLR 98 374 -54 388 218 176 7 chr10 51416539 51416681 -94172607 - MST-int LTR MaLR -981 670 505 6014 237 53 23 chr10 51416683 51418254 -94171034 + MSTA-int LTR MaLR 34 1651 0 429 206 9 37 chr10 51418254 51418361 -94170927 + MSTA LTR MaLR 1 104 -324 251 241 35 11 chr10 51418374 51418461 -94170827 + G-rich Low_complexity Low_complexity 2 90 0 409 208 47 19 chr10 51418477 51418583 -94170705 + MSTA-int LTR MaLR 1538 1646 -5 484 188 21 10 chr10 51418587 51418683 -94170605 + MSTA LTR MaLR 1 97 -331 293 206 49 88 chr10 51418728 51418830 -94170458 + MSTA LTR MaLR 74 171 -257 1083 247 16 32 chr10 51418836 51419152 -94170136 + MSTA-int LTR MaLR 1341 1651 0 366 247 11 0 chr10 51419152 51419245 -94170043 + MSTA LTR MaLR 1 94 -334 254 232 18 0 chr10 51419346 51419402 -94169886 + THE1-int LTR MaLR 911 967 -613 * 584 246 178 21 chr10 51419395 51419631 -94169657 - MST-int LTR MaLR -403 1248 976 804 246 65 51 chr10 51419636 51419929 -94169359 + MSTA LTR MaLR 76 372 -56 487 191 183 8 chr10 51419967 51420098 -94169190 - MST-int LTR MaLR -990 661 508 * 5356 241 62 27 chr10 51420095 51421624 -94167664 + MSTA-int LTR MaLR 29 1611 -40 1610 219 52 3 chr10 51423203 51423546 -94165742 + MSTA LTR MaLR 9 368 -60 1385 172 0 0 chr10 51423575 51423813 -94165475 + MSTA-int LTR MaLR 13 250 -1401 * 1401 163 8 12 chr10 51423810 51424062 -94165226 + MSTA-int LTR MaLR 1401 1651 0 992 260 11 42 chr10 51424062 51424372 -94164916 + MSTA LTR MaLR 1 282 -82 241 244 23 35 chr10 51424366 51424452 -94164836 - HSAT5 Satellite Satellite -1 85 1 * 375 205 0 12 chr10 51424682 51424781 -94164507 - HSAT5 Satellite Satellite -3 97 1 477 90 0 155 chr10 51425001 51425114 -94164174 - HSAT5 Satellite Satellite 0 95 1 258 180 10 160 chr10 51425130 51425230 -94164058 - HSAT5 Satellite Satellite -1 85 1 780 103 5 4 chr10 51425576 51430235 -94159053 + CER Satellite Satellite 1 4663 -6 774 197 7 0 chr10 51430226 51430363 -94158925 + MLT1A1 LTR MaLR 226 363 -2 * 3794 189 102 77 chr10 51430365 51431812 -94157476 + L1MCa LINE L1 723 2205 -4221 287 146 52 52 chr10 51431811 51431907 -94157381 + L1MCa LINE L1 2104 2199 -4227 * 1003 140 70 18 chr10 51431911 51432140 -94157148 + L1MCa LINE L1 2104 2344 -4082 1458 229 0 23 chr10 51632823 51633129 -93956159 - AluSp SINE Alu -8 305 7 620 75 0 0 chr10 51634549 51634629 -93954659 + MADE1 DNA Mariner 1 80 0 2649 97 0 8 chr10 51634951 51635343 -93953945 - LTR7 LTR ERV1 -2 448 60 22 0 0 0 chr10 51635415 51635437 -93953851 + AT_rich Low_complexity Low_complexity 1 22 0 207 100 0 0 chr10 51635807 51635837 -93953451 + (TA)n Simple_repeat Simple_repeat 1 30 0 321 242 11 33 chr10 51635837 51635928 -93953360 + L1MC4 LINE L1 6612 6700 -1342 1906 94 0 29 chr10 51635928 51636203 -93953085 - AluY SINE Alu -7 304 38 301 250 73 0 chr10 51636216 51636312 -93952976 - L1M4 LINE L1 -3670 2476 2374 5720 241 128 21 chr10 51636422 51636751 -93952537 - L1MD3 LINE L1 -8 7987 7695 2125 128 35 41 chr10 51636751 51637117 -93952171 + THE1B LTR MaLR 1 364 0 5720 241 128 21 chr10 51637117 51638903 -93950385 - L1MD3 LINE L1 -300 7695 5645 445 145 170 107 chr10 51638903 51639062 -93950226 - MLT2D LTR ERVL 0 414 246 844 170 0 0 chr10 51639062 51639203 -93950085 - ERVL LTR ERVL -1137 4627 4487 660 190 6 84 chr10 51639228 51639282 -93950006 - MLT2D LTR ERVL -2 412 355 2208 74 3 0 chr10 51639282 51639589 -93949699 - AluY SINE Alu 0 308 1 660 190 6 84 chr10 51639589 51639712 -93949576 - MLT2D LTR ERVL -59 355 248 503 261 30 0 chr10 51639859 51639993 -93949295 - MER58A DNA MER1_type 0 149 12 235 298 135 10 chr10 51640109 51640213 -93949075 - MIR3 SINE MIR -54 154 38 1063 95 16 42 chr10 51641218 51641407 -93947881 + L1MB2 LINE L1 5987 6170 -1 307 261 171 11 chr10 51641421 51641597 -93947691 + MIR SINE MIR 52 255 -7 490 183 200 17 chr10 51641949 51642069 -93947219 - MER5A DNA MER1_type 0 189 48 22 35 0 0 chr10 51642869 51642898 -93946390 + AT_rich Low_complexity Low_complexity 1 29 0 2534 77 0 13 chr10 51643548 51643861 -93945427 + AluSc SINE Alu 1 309 0 326 262 84 9 chr10 51644835 51644942 -93944346 - MIR3 SINE MIR -15 193 79 1019 238 47 59 chr10 51644994 51645334 -93943954 + MLT1H LTR MaLR 1 336 -213 746 264 54 0 chr10 51645802 51645969 -93943319 - MER45A DNA AcHobo 0 178 3 2142 106 0 3 chr10 51647471 51647754 -93941534 + AluSc SINE Alu 1 282 -27 1091 161 0 6 chr10 51649667 51649835 -93939453 - FRAM SINE Alu -10 166 1 212 122 82 0 chr10 51649999 51650048 -93939240 + T-rich Low_complexity Low_complexity 3 55 0 528 299 92 18 chr10 51650235 51650452 -93938836 - MIR SINE MIR -2 260 28 1947 136 7 0 chr10 51650454 51650762 -93938526 - AluSx SINE Alu 0 310 1 204 40 0 0 chr10 51652163 51652188 -93937100 + (CA)n Simple_repeat Simple_repeat 2 26 0 259 239 15 15 chr10 51652563 51652630 -93936658 + MLT1K LTR MaLR 26 92 -496 * 767 278 90 24 chr10 51652626 51652961 -93936327 + MLT1K LTR MaLR 226 582 -6 2088 130 10 0 chr10 51652961 51653262 -93936026 + AluSx SINE Alu 1 304 -8 256 260 146 0 chr10 51654461 51654557 -93934731 - MIR SINE MIR -16 246 137 225 214 0 0 chr10 51654560 51654602 -93934686 + T-rich Low_complexity Low_complexity 1 42 0 957 194 12 0 chr10 51654603 51654773 -93934515 - FAM SINE Alu -3 172 1 222 328 15 0 chr10 51654777 51654844 -93934444 - MIR SINE MIR -63 145 78 191 361 41 57 chr10 51655181 51655375 -93933913 + L2 LINE L2 2854 3044 -228 405 338 63 0 chr10 51655514 51655656 -93933632 + L2 LINE L2 3116 3266 -6 360 210 37 126 chr10 51655899 51656113 -93933175 + MER112 DNA MER1_type 35 229 -31 553 271 164 0 chr10 51656135 51656342 -93932946 + MIR SINE MIR 20 260 -2 507 310 32 19 chr10 51656387 51656545 -93932743 - MIR SINE MIR -78 184 25 2245 121 3 0 chr10 51656546 51656853 -93932435 - AluSx SINE Alu -4 308 1 404 291 60 33 chr10 51656983 51657165 -93932123 + MIR SINE MIR 14 200 -62 215 288 51 0 chr10 51658333 51658392 -93930896 + MIR3 SINE MIR 8 69 -139 301 341 45 8 chr10 51658760 51658892 -93930396 - MIR SINE MIR -65 197 61 554 94 0 12 chr10 51658914 51658999 -93930289 - LTR23 LTR ERV1 -34 403 320 2149 93 0 0 chr10 51659423 51659735 -93929553 + AluSx SINE Alu 15 326 0 318 254 36 34 chr10 51659744 51659880 -93929408 + L1ME3 LINE L1 6021 6162 0 1131 318 35 28 chr10 51660702 51661243 -93928045 - MLT1K LTR MaLR -31 557 13 183 80 0 0 chr10 51661645 51661670 -93927618 + (T)n Simple_repeat Simple_repeat 1 25 0 207 176 0 0 chr10 51661676 51661710 -93927578 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 1397 143 0 5 chr10 51662040 51662263 -93927025 - MLT1D LTR MaLR 0 505 284 6266 76 10 6 chr10 51662288 51663182 -93926106 - L1MA1 LINE L1 -5 6297 5400 288 149 0 196 chr10 51663522 51663690 -93925598 + Alu SINE Alu 225 300 0 614 137 0 0 chr10 51663704 51663799 -93925489 - MLT2D LTR ERVL -319 95 1 1321 249 48 19 chr10 51663799 51664480 -93924808 - L1ME LINE L1 -520 5646 4941 291 97 2 0 chr10 51664514 51664564 -93924724 + MSTA LTR MaLR 259 318 -114 1805 214 60 11 chr10 51664661 51665209 -93924079 - L1M4 LINE L1 -813 5333 4759 183 318 32 16 chr10 51665531 51665594 -93923694 - MER5B DNA MER1_type -20 158 95 21 0 0 0 chr10 51665765 51665786 -93923502 + AT_rich Low_complexity Low_complexity 1 21 0 663 275 110 4 chr10 51665910 51666277 -93923011 - LTR16C LTR ERVL -9 482 37 1241 300 91 5 chr10 51666393 51666833 -93922455 - L2 LINE L2 -7 3306 2829 194 333 28 0 chr10 51666890 51666962 -93922326 - L2 LINE L2 -649 2665 2592 452 261 82 23 chr10 51668036 51668188 -93921100 + MIR SINE MIR 7 163 -65 2270 65 0 14 chr10 51669487 51669780 -93919508 - AluY SINE Alu -16 295 7 2081 117 3 19 chr10 51670923 51671232 -93918056 - AluSx SINE Alu -8 304 1 1973 143 3 17 chr10 51671241 51671541 -93917747 - AluSx SINE Alu -16 296 1 559 317 139 4 chr10 51671734 51671964 -93917324 + MIR SINE MIR 2 262 0 698 263 67 42 chr10 51672133 51672490 -93916798 + L1ME LINE L1 5378 5743 -378 465 147 9 26 chr10 51674682 51674798 -93914490 + CT-rich Low_complexity Low_complexity 3 116 0 253 226 0 0 chr10 51675960 51676013 -93913275 - L2 LINE L2 -2 3270 3218 1657 303 91 43 chr10 51676225 51677258 -93912030 - HERV16 LTR ERVL -3601 1395 313 341 257 9 111 chr10 51677322 51677400 -93911888 - MLT1G LTR MaLR -7 583 499 2056 138 10 0 chr10 51677400 51677689 -93911599 - AluSx SINE Alu -17 295 4 341 257 9 111 chr10 51677689 51677836 -93911452 - MLT1G LTR MaLR -91 499 381 1112 180 15 0 chr10 51677856 51678056 -93911232 + MER20 DNA MER1_type 17 219 0 458 196 226 8 chr10 51678056 51678189 -93911099 - MLT1G LTR MaLR -207 383 222 627 240 34 11 chr10 51678325 51678500 -93910788 - MLT1G LTR MaLR -411 179 1 580 314 30 4 chr10 51678501 51678737 -93910551 - HERV16 LTR ERVL -4753 243 2 780 317 56 42 chr10 51678738 51679167 -93910121 - LTR16A LTR ERVL 0 450 16 508 219 139 0 chr10 51679894 51680045 -93909243 - MER96 DNA MER1_type? 0 175 4 1019 179 6 0 chr10 51680281 51680443 -93908845 - AluJo/FRAM SINE Alu -4 308 146 466 289 0 53 chr10 51680443 51680630 -93908658 - AluJb SINE Alu -133 179 3 225 360 0 0 chr10 51681619 51681694 -93907594 + MIR SINE MIR 21 95 -167 2300 112 0 0 chr10 51681708 51682013 -93907275 - AluSx SINE Alu -7 305 1 6326 232 17 9 chr10 51682063 51684126 -93905162 - L1PA12 LINE L1 -5512 2069 1 262 222 61 15 chr10 51684305 51684385 -93904903 - MIR3 SINE MIR -46 162 76 561 274 98 10 chr10 51684541 51684847 -93904441 + L1MEd LINE L1 903 1235 -4884 355 261 231 15 chr10 51684892 51685087 -93904201 + L1MEd LINE L1 1349 1585 -4725 805 167 88 15 chr10 51685102 51685306 -93903982 - Charlie4 DNA MER1_type -3 1958 1740 2327 160 18 61 chr10 51685913 51686358 -93902930 - MSTB LTR MaLR 0 426 1 1811 171 10 23 chr10 51687041 51687350 -93901938 + AluJo SINE Alu 1 305 -7 2389 121 47 10 chr10 51687941 51688346 -93900942 - MSTA LTR MaLR -8 420 1 1659 260 51 101 chr10 51689077 51689862 -93899426 + L2 LINE L2 2148 2893 -421 192 40 0 0 chr10 51692338 51692363 -93896925 + (G)n Simple_repeat Simple_repeat 1 25 0 236 28 56 0 chr10 51692392 51692428 -93896860 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 25 51 0 0 chr10 51693034 51693073 -93896215 + AT_rich Low_complexity Low_complexity 1 39 0 237 132 0 0 chr10 51695196 51695234 -93894054 + (GAA)n Simple_repeat Simple_repeat 3 40 0 383 83 17 0 chr10 51695549 51695609 -93893679 + (GA)n Simple_repeat Simple_repeat 2 62 0 345 259 115 35 chr10 51697353 51697511 -93891777 + MIR SINE MIR 19 188 -74 639 171 21 71 chr10 51697575 51697715 -93891573 + FLAM_C SINE Alu 1 133 0 246 333 111 0 chr10 51697751 51697859 -93891429 + L3 LINE CR1 1455 1574 -3 317 314 138 11 chr10 51697939 51698127 -93891161 - MIR SINE MIR -48 214 3 300 268 22 120 chr10 51699492 51699675 -93889613 - MER102a DNA MER1_type 0 330 166 1042 176 16 5 chr10 51699713 51699900 -93889388 + MLT1A1 LTR MaLR 1 189 -176 590 271 54 73 chr10 51699903 51700313 -93888975 - L2 LINE L2 -107 3206 2805 1256 114 0 10 chr10 51700332 51700525 -93888763 + MLT2A1 LTR ERVL 1 191 -253 207 0 0 0 chr10 51700649 51700672 -93888616 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 221 333 158 17 chr10 51702389 51702566 -93886722 + MIR SINE MIR 47 248 -14 266 337 37 43 chr10 51702670 51702833 -93886455 - L3 LINE CR1 -11 1566 1405 359 238 80 60 chr10 51702875 51703026 -93886262 - MIR SINE MIR -42 220 67 344 284 11 11 chr10 51703395 51703483 -93885805 + L2 LINE L2 3184 3271 -1 359 330 155 17 chr10 51704839 51705078 -93884210 + L1MA5 LINE L1 493 764 -6445 12953 187 33 16 chr10 51705152 51705894 -93883394 + L1MA5 LINE L1 1717 2445 -4917 3584 109 4 4 chr10 51705894 51706408 -93882880 + MER75 DNA T2_type 1 514 0 12953 187 33 16 chr10 51706408 51711212 -93878076 + L1MA5 LINE L1 2445 7362 0 195 42 0 0 chr10 51711261 51711285 -93878003 + (A)n Simple_repeat Simple_repeat 1 24 0 265 191 21 0 chr10 51711701 51711748 -93877540 + MER5B DNA MER1_type 2 49 -129 3528 204 109 83 chr10 51711856 51712439 -93876849 - L1MC3 LINE L1 -7 7778 7211 271 250 11 65 chr10 51712439 51712531 -93876757 - MLT1F1 LTR MaLR -445 122 36 3528 204 109 83 chr10 51712531 51713247 -93876041 - L1MC3 LINE L1 -574 7211 6353 440 282 32 8 chr10 51713247 51713371 -93875917 + MER5B DNA MER1_type 52 178 0 282 113 32 16 chr10 51714126 51714188 -93875100 + CT-rich Low_complexity Low_complexity 2 64 0 254 268 65 22 chr10 51714256 51714394 -93874894 - HAL1b LINE L1 -457 891 748 377 327 83 6 chr10 51714394 51714550 -93874738 - HAL1 LINE L1 -1558 949 782 298 276 168 88 chr10 51715172 51715512 -93873776 + L2 LINE L2 2945 3311 -2 1932 155 0 22 chr10 51716150 51716466 -93872822 - AluJb SINE Alu -3 309 1 400 281 79 24 chr10 51717030 51717645 -93871643 + L1ME LINE L1 5009 5651 -513 206 290 86 21 chr10 51717650 51717743 -93871545 + MER5B DNA MER1_type 1 99 -79 948 225 178 17 chr10 51717810 51718272 -93871016 + L1MEc LINE L1 537 1072 -5324 293 218 99 55 chr10 51718263 51718465 -93870823 - L1M4 LINE L1 -902 5244 5034 * 254 283 43 22 chr10 51718655 51718747 -93870541 - 7SK RNA RNA -95 98 5 3524 55 0 7 chr10 51720601 51721052 -93868236 + LTR7 LTR ERV1 1 448 -2 18839 92 10 35 chr10 51721054 51721453 -93867835 + HERVH LTR ERV1 1 408 -7305 4040 34 0 0 chr10 51721453 51721930 -93867358 + L1PA3 LINE L1 5679 6155 0 18839 92 10 35 chr10 51721930 51724600 -93864688 + HERVH LTR ERV1 408 2995 -4718 919 127 7 0 chr10 51724579 51724729 -93864559 + HERVH LTR ERV1 3140 3290 -4423 * 3203 113 0 6 chr10 51724719 51725224 -93864064 + HERVH LTR ERV1 3492 3993 -3720 4183 138 1 1 chr10 51725226 51725888 -93863400 + HERVH LTR ERV1 4488 5149 -2564 1296 128 18 14 chr10 51725889 51726108 -93863180 + HERVH LTR ERV1 5600 5819 -1894 2416 78 48 0 chr10 51726108 51726480 -93862808 + HERVH LTR ERV1 7324 7713 0 1118 81 11 6 chr10 51726480 51726654 -93862634 + LTR7 LTR ERV1 1 175 -275 291 259 0 0 chr10 51726835 51726920 -93862368 + L1MC4 LINE L1 6617 6701 -1341 240 193 0 35 chr10 51726921 51726978 -93862310 + (TA)n Simple_repeat Simple_repeat 2 56 0 231 232 0 54 chr10 51727347 51727403 -93861885 - MER5B DNA MER1_type -124 54 2 213 288 51 68 chr10 51728001 51728119 -93861169 + MER5A DNA MER1_type 52 167 -22 261 260 132 28 chr10 51729618 51729868 -93859420 - L1ME4a LINE L1 -117 6004 5729 180 0 0 0 chr10 51730562 51730582 -93858706 + (CAATT)n Simple_repeat Simple_repeat 1 20 0 1608 248 108 35 chr10 51730582 51731186 -93858102 - MER21B LTR ERV1 -201 662 15 216 111 0 0 chr10 51731204 51731240 -93858048 + (TGAA)n Simple_repeat Simple_repeat 2 37 0 238 288 0 30 chr10 51731245 51731311 -93857977 - L2 LINE L2 -21 3292 3229 233 348 76 11 chr10 51731440 51731532 -93857756 + L2 LINE L2 3201 3298 -15 306 0 0 0 chr10 51731934 51731968 -93857320 + (A)n Simple_repeat Simple_repeat 1 34 0 378 239 231 8 chr10 51732392 51732522 -93856766 - MIR SINE MIR -75 187 29 318 348 15 22 chr10 51732698 51732833 -93856455 + L2 LINE L2 2918 3051 -221 990 251 110 72 chr10 51732893 51733422 -93855866 + MLT1H LTR MaLR 1 549 0 721 250 117 87 chr10 51734467 51734862 -93854426 - MLT1G LTR MaLR 0 555 124 3382 171 72 6 chr10 51734862 51735498 -93853790 + LTR58 LTR ERV1 1 678 -1 721 250 117 87 chr10 51735498 51735626 -93853662 - MLT1G LTR MaLR -431 124 1 1045 304 69 37 chr10 51736486 51737345 -93851943 + L1MCa LINE L1 900 1999 -4608 1668 267 93 49 chr10 51737367 51737640 -93851648 + L1MCa LINE L1 2013 2273 -4153 2311 75 7 3 chr10 51737640 51737933 -93851355 + AluY SINE Alu 1 294 -17 1668 267 93 49 chr10 51737933 51738368 -93850920 + L1MCa LINE L1 2273 2688 -3738 1916 142 22 19 chr10 51738368 51738679 -93850609 + AluSx SINE Alu 1 312 0 1668 267 93 49 chr10 51738679 51739651 -93849637 + L1MCa LINE L1 2688 3769 -2657 388 327 93 70 chr10 51739743 51740131 -93849157 - L2 LINE L2 -52 3220 2824 1587 154 0 0 chr10 51740240 51740474 -93848814 + AluSx SINE Alu 1 234 -78 215 274 0 0 chr10 51741817 51741868 -93847420 - L2 LINE L2 -2 3311 3261 334 164 27 127 chr10 51741994 51742104 -93847184 - MER103 DNA DNA -66 100 2 593 212 0 53 chr10 51743038 51743170 -93846118 + Tigger7 DNA MER2_type 4 128 -577 1590 157 44 35 chr10 51743171 51743489 -93845799 + Tigger7 DNA MER2_type 2167 2487 0 276 289 59 128 chr10 51743842 51744029 -93845259 - L2 LINE L2 -190 3082 2909 2118 198 55 34 chr10 51744079 51744574 -93844714 - MLT1D LTR MaLR 0 505 1 25 31 0 0 chr10 51745028 51745060 -93844228 + AT_rich Low_complexity Low_complexity 1 32 0 2260 101 0 3 chr10 51745096 51745393 -93843895 - AluSc SINE Alu -13 296 1 390 296 37 15 chr10 51745554 51745689 -93843599 - MIR3 SINE MIR -48 160 23 788 354 90 25 chr10 51746795 51747580 -93841708 - L2 LINE L2 -1604 1710 875 233 180 60 0 chr10 51747592 51747642 -93841646 - LTR45 LTR ERV1 -347 178 126 268 263 62 0 chr10 51747669 51747749 -93841539 - L2 LINE L2 -2548 766 682 197 326 147 16 chr10 51747808 51747937 -93841351 - L2 LINE L2 -2801 513 368 230 185 111 0 chr10 51747945 51747999 -93841289 + MIR SINE MIR 133 192 -70 21 0 0 0 chr10 51748019 51748040 -93841248 + AT_rich Low_complexity Low_complexity 1 21 0 703 272 87 0 chr10 51748073 51748279 -93841009 - MIR SINE MIR -28 234 11 22 0 0 0 chr10 51749857 51749879 -93839409 + AT_rich Low_complexity Low_complexity 1 22 0 348 324 23 6 chr10 51750414 51750574 -93838714 + MIR3 SINE MIR 20 186 -22 521 326 69 60 chr10 51750929 51751362 -93837926 - L2 LINE L2 0 3272 2836 1482 104 59 0 chr10 51751504 51751706 -93837582 + AluSc SINE Alu 85 298 -11 2642 91 19 3 chr10 51751755 51752117 -93837171 - MER39 LTR ERV1 0 707 340 4356 148 7 24 chr10 51752122 51752831 -93836457 + MER50 LTR ERV1 1 697 -37 1242 160 63 48 chr10 51752854 51753122 -93836166 - MER39 LTR ERV1 -433 274 3 180 0 0 0 chr10 51757197 51757217 -93832071 + (TTTTTG)n Simple_repeat Simple_repeat 4 23 0 228 261 153 0 chr10 51757244 51757355 -93831933 - L1MC4 LINE L1 -1 8041 7914 1799 210 100 15 chr10 51757438 51757948 -93831340 - L1ME2 LINE L1 -20 6144 5667 641 305 37 34 chr10 51757944 51758239 -93831049 - L1MC4a LINE L1 -136 7672 7377 * 1789 221 107 28 chr10 51758258 51758327 -93830961 + MLT1F LTR MaLR 10 72 -470 3678 153 8 52 chr10 51758327 51758967 -93830321 + LTR9 LTR ERV1 1 612 0 1789 221 107 28 chr10 51758967 51759391 -93829897 + MLT1F LTR MaLR 72 542 0 1234 263 92 20 chr10 51759391 51759900 -93829388 - L1MC4 LINE L1 -591 7451 6906 470 178 22 111 chr10 51760009 51760144 -93829144 - L2 LINE L2 -4 3309 3187 1020 232 38 0 chr10 51760890 51761101 -93828187 + MER20 DNA MER1_type 1 219 0 208 228 70 35 chr10 51762044 51762101 -93827187 + L2 LINE L2 3250 3308 -5 1391 225 110 48 chr10 51762153 51762243 -93827045 - MER34B LTR ERV1 -3 562 479 195 42 0 0 chr10 51762243 51762267 -93827021 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1391 225 110 48 chr10 51762267 51762696 -93826592 - MER34B LTR ERV1 -86 479 11 200 228 120 84 chr10 51762945 51763112 -93826176 + L2 LINE L2 2830 3002 -270 682 226 126 6 chr10 51763132 51763291 -93825997 + MER5B DNA MER1_type 1 178 0 424 200 17 113 chr10 51763328 51763443 -93825845 - MER5A DNA MER1_type -77 112 9 1013 191 11 21 chr10 51763475 51763664 -93825624 + MER5A DNA MER1_type 1 187 -2 394 286 83 83 chr10 51763664 51763904 -93825384 + L2 LINE L2 3032 3271 -1 539 266 34 51 chr10 51764591 51764768 -93824520 + MER5B DNA MER1_type 5 178 0 22 56 0 0 chr10 51765237 51765273 -93824015 + AT_rich Low_complexity Low_complexity 1 36 0 467 306 50 6 chr10 51766756 51766936 -93822352 + MER117 DNA MER1_type 1 188 -9 1894 189 175 25 chr10 51767620 51767886 -93821402 + MLT1D LTR MaLR 1 226 -279 2387 137 6 6 chr10 51767886 51768223 -93821065 - MER1B DNA MER1_type 0 337 1 1894 189 175 25 chr10 51768223 51768395 -93820893 + MLT1D LTR MaLR 226 505 0 1482 215 34 0 chr10 51768777 51769075 -93820213 - AluJo SINE Alu -4 308 1 323 302 32 63 chr10 51769256 51769382 -93819906 + L2 LINE L2 3151 3272 0 301 222 50 10 chr10 51769545 51769644 -93819644 + L1ME4a LINE L1 6018 6120 -1 620 241 108 22 chr10 51769811 51770043 -93819245 + MIR SINE MIR 11 262 0 379 282 0 0 chr10 51770212 51770315 -93818973 + MIR3 SINE MIR 105 207 -1 191 103 26 0 chr10 51771248 51771287 -93818001 + (CAA)n Simple_repeat Simple_repeat 1 40 0 306 247 25 0 chr10 51771788 51771869 -93817419 + MIR SINE MIR 89 171 -91 1716 171 72 77 chr10 51771872 51772076 -93817212 - MER31B LTR ERV1 0 543 340 5793 137 13 18 chr10 51772076 51772392 -93816896 + MER4D LTR ERV1 1 317 -586 2197 124 3 3 chr10 51772392 51772698 -93816590 - AluSx SINE Alu -6 306 1 5793 137 13 18 chr10 51772698 51773288 -93816000 + MER4D LTR ERV1 317 903 0 1716 171 72 77 chr10 51773288 51773551 -93815737 - MER31B LTR ERV1 -203 340 1 1695 144 13 7 chr10 51773684 51773983 -93815305 - L1 LINE L1 -787 5359 5059 1335 163 19 27 chr10 51773989 51774247 -93815041 + AluJb SINE Alu 1 256 -56 492 224 20 0 chr10 51774248 51774346 -93814942 + AluJb SINE Alu 208 307 -5 3839 126 129 78 chr10 51774401 51775269 -93814019 + L1MA9 LINE L1 5369 6280 -32 861 279 34 67 chr10 51775289 51775345 -93813943 - L2 LINE L2 0 3313 3257 1230 194 38 75 chr10 51775345 51775664 -93813624 - AluJb SINE Alu -5 307 1 861 279 34 67 chr10 51775664 51775965 -93813323 - L2 LINE L2 -56 3257 2968 227 208 102 188 chr10 51776111 51776189 -93813099 - MIR SINE MIR -6 256 173 2105 128 3 82 chr10 51776189 51776555 -93812733 - MER1B DNA MER1_type 0 337 1 227 208 102 188 chr10 51776555 51776673 -93812615 - MIR SINE MIR -89 173 77 567 240 0 0 chr10 51777150 51777250 -93812038 + FLAM_A SINE Alu 2 101 -41 246 288 115 36 chr10 51777407 51777546 -93811742 - MIR SINE MIR -93 169 20 215 267 68 99 chr10 51779232 51779393 -93809895 + MIR SINE MIR 101 256 -6 352 331 44 6 chr10 51779666 51779847 -93809441 - MER117 DNA MER1_type -9 188 1 298 329 6 47 chr10 51780064 51780234 -93809054 - MIR SINE MIR -73 189 27 673 335 61 45 chr10 51780844 51781153 -93808135 + L1MC/D LINE L1 4297 4599 -1547 2028 141 0 7 chr10 51781153 51781451 -93807837 - AluSx SINE Alu -11 301 6 673 335 61 45 chr10 51781451 51781746 -93807542 + L1MC/D LINE L1 4599 4911 -1235 357 0 57 0 chr10 51781805 51781858 -93807430 + (TG)n Simple_repeat Simple_repeat 2 57 0 189 0 0 0 chr10 51781863 51781884 -93807404 + (GA)n Simple_repeat Simple_repeat 1 21 0 983 202 67 10 chr10 51781906 51782114 -93807174 - AluJo SINE Alu -92 220 1 1231 280 57 18 chr10 51782317 51782824 -93806464 + L1MC/D LINE L1 5290 5816 -1992 556 263 6 29 chr10 51783509 51783684 -93805604 - MER5B DNA MER1_type -4 174 4 260 336 88 18 chr10 51783912 51784025 -93805263 + MER5A DNA MER1_type 62 182 -7 530 206 55 48 chr10 51784272 51784400 -93804888 - MLT1C LTR MaLR -294 173 42 3559 143 132 11 chr10 51784400 51785031 -93804257 - MER39 LTR ERV1 0 707 1 530 206 55 48 chr10 51785031 51785067 -93804221 - MLT1C LTR MaLR -425 42 8 186 43 0 0 chr10 51786727 51786750 -93802538 + (TG)n Simple_repeat Simple_repeat 2 24 0 1729 160 176 30 chr10 51786811 51787180 -93802108 + MSTA LTR MaLR 1 423 -5 9475 139 26 35 chr10 51787204 51788790 -93800498 + MSTA-int LTR MaLR 9 1580 0 1770 143 188 53 chr10 51788790 51789121 -93800167 + MSTA LTR MaLR 1 390 -38 2411 61 7 0 chr10 51789121 51789415 -93799873 - AluY SINE Alu -15 296 1 1770 143 188 53 chr10 51789415 51789460 -93799828 + MSTA LTR MaLR 390 428 0 481 290 95 36 chr10 51790120 51790341 -93798947 + MIR SINE MIR 19 252 -10 232 242 16 16 chr10 51790422 51790484 -93798804 - MIR SINE MIR -115 93 32 249 286 20 31 chr10 51792385 51792483 -93796805 + L2 LINE L2 3180 3276 -37 381 333 42 18 chr10 51792547 51792715 -93796573 - MIR SINE MIR -73 189 18 409 147 47 0 chr10 51892760 51892930 -93696358 + (TA)n Simple_repeat Simple_repeat 2 179 0 24 32 0 0 chr10 51893084 51893115 -93696173 + AT_rich Low_complexity Low_complexity 1 31 0 513 316 30 34 chr10 51893323 51893560 -93695728 - MIR SINE MIR -14 248 13 543 318 56 6 chr10 51893761 51893940 -93695348 + MER5A DNA MER1_type 2 189 0 2621 208 45 21 chr10 51894005 51894739 -93694549 - L1MB4 LINE L1 -1 6177 5448 908 137 0 0 chr10 51894744 51894868 -93694420 + AluSq/x SINE Alu 3 126 -187 452 192 0 0 chr10 51894910 51894983 -93694305 + AluSc SINE Alu 128 200 -109 289 310 0 0 chr10 51895174 51895245 -93694043 + MIR SINE MIR 2 72 -190 364 147 0 53 chr10 51895254 51895329 -93693959 + AluJ/FRAM SINE Alu 232 302 0 1852 164 0 20 chr10 51895444 51895743 -93693545 + AluSx SINE Alu 1 293 -19 227 253 66 0 chr10 51896410 51896501 -93692787 - L2 LINE L2 -219 3053 2957 830 250 10 15 chr10 51898735 51898931 -93690357 + AluJb SINE Alu 1 195 -117 205 333 46 19 chr10 51900790 51900898 -93688390 + MIR SINE MIR 20 130 -78 1445 102 5 5 chr10 51901088 51901285 -93688003 + AluSp SINE Alu 96 292 -21 460 183 14 0 chr10 51901300 51901371 -93687917 + AluJ/FLAM SINE Alu 3 74 -238 4612 233 47 62 chr10 51901471 51903217 -93686071 + L1M4 LINE L1 3595 5313 -833 701 74 0 0 chr10 51903218 51903313 -93685975 - L1PB1 LINE L1 0 6151 6057 1254 180 4 0 chr10 51903325 51903569 -93685719 - L1MB4 LINE L1 -743 5403 5159 578 215 15 0 chr10 51903567 51903697 -93685591 + L1 LINE L1 4776 4907 -1239 * 277 116 0 0 chr10 51903697 51903740 -93685548 - AluSc SINE Alu -99 200 158 2242 118 0 6 chr10 51903840 51904161 -93685127 - L1PA11 LINE L1 -97 6077 5759 3918 240 59 33 chr10 51904264 51907294 -93681994 + L1M4 LINE L1 817 4027 -2617 2559 50 0 0 chr10 51907294 51907593 -93681695 - AluY SINE Alu -5 306 8 3918 240 59 33 chr10 51907593 51907786 -93681502 + L1M4 LINE L1 4027 4213 -2431 451 67 17 0 chr10 51907887 51907947 -93681341 - MER57A LTR ERV1 -342 61 1 1267 114 204 9 chr10 51907947 51908167 -93681121 - MER57A-int LTR ERV1 0 7537 7275 717 142 26 0 chr10 51908188 51908301 -93680987 - LTR54B LTR ERV1 -380 118 3 9576 99 17 9 chr10 51908301 51908701 -93680587 - MER57A-int LTR ERV1 -389 7148 6753 2823 7 0 0 chr10 51908701 51909004 -93680284 + AluYa5 SINE Alu 1 303 -8 9576 99 17 9 chr10 51909004 51909932 -93679356 - MER57A-int LTR ERV1 -784 6753 5810 5681 226 138 18 chr10 51909933 51911298 -93677990 + MER52A LTR ERV1 2 1529 -226 2901 179 48 0 chr10 51911311 51911836 -93677452 + ERVL LTR ERVL 4201 4750 -1014 1671 179 50 0 chr10 51911936 51912254 -93677034 + L1PB4 LINE L1 5821 6154 -2 1465 173 81 11 chr10 51912891 51913215 -93676073 - AluJo SINE Alu 0 302 2 1001 228 141 25 chr10 51915052 51915361 -93673927 + MLT1C LTR MaLR 54 414 -53 207 0 0 0 chr10 51915361 51915384 -93673904 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1001 228 141 25 chr10 51915384 51915442 -93673846 + MLT1C LTR MaLR 414 464 -3 1426 243 41 33 chr10 51915674 51916041 -93673247 + MLT1A2 LTR MaLR 1 370 -4 312 132 26 79 chr10 51916948 51917012 -93672276 - L1MC2 LINE L1 -17 6327 6266 232 57 29 0 chr10 51917012 51917047 -93672241 + (TA)n Simple_repeat Simple_repeat 2 37 0 312 132 26 79 chr10 51917047 51917058 -93672230 - L1MC2 LINE L1 -78 6266 6256 253 165 52 0 chr10 51917111 51917208 -93672080 + (TA)n Simple_repeat Simple_repeat 1 102 0 2059 187 54 37 chr10 51917208 51917762 -93671526 - L1MB4 LINE L1 -2 6178 5710 697 246 49 92 chr10 51918602 51918927 -93670361 - L2 LINE L2 0 3313 3003 2428 117 5 21 chr10 51918927 51919302 -93669986 + THE1C LTR MaLR 1 369 -6 21 36 0 0 chr10 51921278 51921306 -93667982 + AT_rich Low_complexity Low_complexity 1 28 0 25 31 0 0 chr10 51921462 51921494 -93667794 + AT_rich Low_complexity Low_complexity 1 32 0 650 265 17 17 chr10 51921496 51921677 -93667611 - MIR SINE MIR -24 238 58 30 0 0 0 chr10 51921744 51921774 -93667514 + AT_rich Low_complexity Low_complexity 1 30 0 2475 45 0 63 chr10 51922226 51922558 -93666730 - AluY SINE Alu 0 311 1 2270 109 0 0 chr10 51924474 51924768 -93664520 + AluSq SINE Alu 1 294 -19 828 200 0 0 chr10 51925146 51925291 -93663997 - AluJo/FRAM SINE Alu -8 304 160 228 191 0 24 chr10 51925291 51925333 -93663955 - Alu SINE Alu -261 41 1 2270 100 16 10 chr10 51925377 51925688 -93663600 + AluSq SINE Alu 1 313 0 769 235 100 48 chr10 51925731 51926042 -93663246 - L1MC4 LINE L1 -89 7953 7627 31 26 0 0 chr10 51926922 51926960 -93662328 + AT_rich Low_complexity Low_complexity 1 38 0 1203 133 66 9 chr10 51926981 51927192 -93662096 - AluJo SINE Alu 0 312 90 971 178 6 6 chr10 51927191 51927348 -93661940 - AluJo SINE Alu -155 157 1 * 1560 204 19 0 chr10 51927350 51927674 -93661614 - L1MB7 LINE L1 -43 6141 5812 2350 93 3 10 chr10 51927689 51928001 -93661287 + AluSx SINE Alu 1 310 -2 4590 178 36 39 chr10 51928003 51929215 -93660073 - L1MB3 LINE L1 -10 6173 4957 2502 43 0 56 chr10 51929215 51929537 -93659751 - AluYb8 SINE Alu -14 304 1 4590 178 36 39 chr10 51929537 51929730 -93659558 - L1MB3 LINE L1 -1226 4957 4765 1502 218 3 3 chr10 51929743 51930032 -93659256 - AluJb SINE Alu -23 289 1 402 283 183 5 chr10 51931583 51931774 -93657514 - MIR SINE MIR -3 259 35 2062 77 4 11 chr10 51932029 51932302 -93656986 - AluY SINE Alu -40 271 1 287 294 13 39 chr10 51932940 51933093 -93656195 + GA-rich Low_complexity Low_complexity 1 149 0 3441 132 74 0 chr10 51934428 51934944 -93654344 - MER41C LTR ERV1 0 554 1 330 296 41 0 chr10 51935152 51935250 -93654038 + HAL1 LINE L1 1582 1683 -824 455 314 97 0 chr10 51935413 51935588 -93653700 - LTR16B LTR ERVL -183 281 90 183 80 0 0 chr10 51935729 51935754 -93653534 + (A)n Simple_repeat Simple_repeat 1 25 0 1222 170 91 47 chr10 51935763 51936039 -93653249 + AluJo SINE Alu 7 294 -18 1788 128 0 95 chr10 51936041 51936378 -93652910 + AluJb SINE Alu 1 305 -7 342 306 90 18 chr10 51936383 51936661 -93652627 + L1ME LINE L1 2207 2504 -3642 1881 126 4 4 chr10 51936752 51937021 -93652267 + AluSx SINE Alu 3 271 -41 744 286 153 26 chr10 51937134 51937710 -93651578 + L1ME LINE L1 3497 4145 -2001 70 0 0 0 chr10 51937718 51937788 -93651500 + AT_rich Low_complexity Low_complexity 1 70 0 234 257 147 0 chr10 51937832 51937941 -93651347 + L1ME LINE L1 4628 4752 -1394 382 205 120 17 chr10 51938128 51938245 -93651043 - MLT1I LTR MaLR -221 188 60 1217 145 42 19 chr10 51938355 51938569 -93650719 + AluSg/x SINE Alu 86 304 -8 683 263 47 85 chr10 51938570 51938855 -93650433 + L1ME LINE L1 4830 5124 -1042 2032 79 0 69 chr10 51938855 51939146 -93650142 + AluSg1 SINE Alu 33 303 -6 683 263 47 85 chr10 51939146 51939580 -93649708 + L1ME LINE L1 5124 5515 -651 743 199 124 55 chr10 51939612 51939729 -93649559 - HsTC2 DNA Tc2 -4 1894 1787 1915 130 53 7 chr10 51939729 51940014 -93649274 - AluSx SINE Alu -14 298 1 743 199 124 55 chr10 51940014 51940242 -93649046 - HsTC2 DNA Tc2 -111 1787 1525 1961 229 104 2 chr10 51940265 51940766 -93648522 + MLT1G LTR MaLR 37 588 -2 227 204 107 48 chr10 51940829 51940932 -93648356 + L2 LINE L2 676 784 -2530 282 125 0 0 chr10 51942784 51942832 -93646456 + (TTAGGG)n Simple_repeat Simple_repeat 2 49 0 213 178 0 0 chr10 51942883 51942928 -93646360 + (TTAGGG)n Simple_repeat Simple_repeat 2 46 0 2755 59 12 0 chr10 51944431 51944771 -93644517 - LTR14A LTR ERVK 0 344 1 1098 241 79 16 chr10 51945832 51945995 -93643293 - Ricksha DNA DNA -2727 519 337 1098 155 17 0 chr10 51945995 51946169 -93643119 - ERVL LTR ERVL -1 5763 5587 234 94 0 0 chr10 51946222 51946254 -93643034 + MLT2A1 LTR ERVL 413 444 0 32 26 0 0 chr10 51946554 51946593 -93642695 + AT_rich Low_complexity Low_complexity 1 39 0 439 276 91 80 chr10 51947254 51947540 -93641748 + MLT1F-int LTR MaLR 1023 1311 -60 631 257 0 7 chr10 51947588 51947728 -93641560 + MLT1F LTR MaLR 5 143 -399 29 28 0 0 chr10 51947848 51947884 -93641404 + AT_rich Low_complexity Low_complexity 1 36 0 381 43 0 0 chr10 51948195 51948242 -93641046 + (CA)n Simple_repeat Simple_repeat 1 47 0 2184 155 64 31 chr10 51948375 51948795 -93640493 + Tigger2a DNA MER2_type 1 434 0 755 172 46 17 chr10 51951288 51951462 -93637826 - L1MA10 LINE L1 -1 6333 6155 221 255 0 0 chr10 51951646 51951693 -93637595 + (TTCA)n Simple_repeat Simple_repeat 2 48 0 379 231 33 33 chr10 51952987 51953078 -93636210 + MIR SINE MIR 47 137 -125 22 56 0 0 chr10 51953764 51953800 -93635488 + AT_rich Low_complexity Low_complexity 1 36 0 2288 58 44 17 chr10 51954088 51954383 -93634905 - AluY SINE Alu -7 304 2 1594 181 0 39 chr10 51954547 51954856 -93634432 - AluJb SINE Alu -15 297 1 255 247 31 41 chr10 51955002 51955099 -93634189 + MIR SINE MIR 96 191 -71 502 304 123 0 chr10 51955757 51955977 -93633311 + MIR SINE MIR 1 247 -15 316 280 104 0 chr10 51956447 51956572 -93632716 + MIR SINE MIR 52 189 -73 2119 116 0 0 chr10 51957688 51957965 -93631323 + AluSx SINE Alu 1 277 -35 272 27 27 0 chr10 51957969 51958006 -93631282 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 268 352 36 36 chr10 51958265 51958458 -93630830 - L3 LINE CR1 -133 1444 1252 993 256 9 0 chr10 51958608 51958827 -93630461 - MER58A DNA MER1_type -3 221 1 273 321 0 0 chr10 51959200 51959281 -93630007 - L3 LINE CR1 -1050 527 447 239 164 36 0 chr10 51959794 51959849 -93629439 + GA-rich Low_complexity Low_complexity 2 58 0 1648 182 25 0 chr10 51959913 51960188 -93629100 + MLT2B1 LTR ERVL 1 282 -238 2720 89 25 109 chr10 51960221 51960345 -93628943 - MER1A DNA MER1_type -2184 522 389 2211 122 0 0 chr10 51960345 51960632 -93628656 - AluSq SINE Alu -25 288 2 2720 89 25 109 chr10 51960632 51961084 -93628204 - MER1A DNA MER1_type -2317 389 3 257 53 0 73 chr10 51961085 51961126 -93628162 - L1M4 LINE L1 -5508 1034 999 231 114 0 0 chr10 51961128 51961163 -93628125 + (TTG)n Simple_repeat Simple_repeat 2 36 0 2644 222 21 34 chr10 51961200 51961821 -93627467 - L1M4 LINE L1 -5763 779 167 246 128 0 0 chr10 51961856 51961895 -93627393 + (CA)n Simple_repeat Simple_repeat 2 40 0 611 102 10 20 chr10 51961895 51961993 -93627295 + MER4A LTR ERV1 2 98 -566 1817 147 11 19 chr10 51961993 51962341 -93626947 + MER4A LTR ERV1 261 664 0 2151 112 77 33 chr10 51962344 51962709 -93626579 + MER4A-int LTR ERV1 1 381 -6217 2005 196 68 23 chr10 51962713 51963152 -93626136 + LTR2B LTR ERV1 32 490 0 1904 146 124 114 chr10 51963152 51963845 -93625443 + MER4-int LTR ERV1 364 1111 -5487 381 102 0 0 chr10 51963845 51963904 -93625384 + (TG)n Simple_repeat Simple_repeat 2 60 0 2478 168 69 56 chr10 51963904 51964008 -93625280 + MER4-int LTR ERV1 1161 1262 -5336 231 36 0 0 chr10 51964008 51964036 -93625252 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 2478 168 69 56 chr10 51964036 51964513 -93624775 + MER4-int LTR ERV1 1262 1753 -4845 2401 82 7 3 chr10 51964513 51964818 -93624470 - AluSq SINE Alu -7 306 1 2478 168 69 56 chr10 51964818 51964861 -93624427 + MER4-int LTR ERV1 1753 1794 -4804 2177 121 3 0 chr10 51964865 51965162 -93624126 - AluSx SINE Alu -12 300 3 202 105 105 0 chr10 51965292 51965330 -93623958 - MER5C DNA MER1_type -200 124 83 2005 147 0 19 chr10 51965579 51965886 -93623402 - AluSx SINE Alu -11 301 1 931 126 0 0 chr10 51966073 51966200 -93623088 + AluJb SINE Alu 166 292 -20 2354 95 0 3 chr10 51966203 51966509 -93622779 + AluY SINE Alu 2 306 -5 368 316 63 0 chr10 51967054 51967244 -93622044 - MIR SINE MIR -1 261 60 2264 150 57 7 chr10 51967260 51967666 -93621622 + MSTB1 LTR MaLR 7 432 0 2385 72 0 44 chr10 51968040 51968358 -93620930 - AluSc SINE Alu -5 304 1 423 302 74 56 chr10 51968609 51968807 -93620481 - LTR16A LTR ERVL -7 443 233 2434 62 0 0 chr10 51968807 51969097 -93620191 + AluY SINE Alu 1 290 -21 423 302 74 56 chr10 51969097 51969275 -93620013 - LTR16A LTR ERVL -217 233 60 22 35 0 0 chr10 51970213 51970242 -93619046 + AT_rich Low_complexity Low_complexity 1 29 0 8977 99 12 1 chr10 51970563 51972609 -93616679 - L1PA10 LINE L1 -2 6166 4101 2047 129 3 23 chr10 51972647 51972957 -93616331 + AluSq SINE Alu 1 304 -9 767 136 7 57 chr10 51973086 51973226 -93616062 + FLAM_C SINE Alu 1 133 0 415 370 21 5 chr10 51973268 51973457 -93615831 + MIR SINE MIR 20 211 -51 816 275 71 31 chr10 51973670 51973994 -93615294 - LTR33 LTR ERVL -184 337 1 237 91 0 0 chr10 51974593 51974637 -93614651 - L1MB4 LINE L1 -2 6178 6135 802 97 0 0 chr10 51974637 51974740 -93614548 + AluSq/x SINE Alu 1 103 -210 402 120 0 93 chr10 51974776 51974851 -93614437 - FLAM_A SINE Alu 0 133 66 2112 115 3 10 chr10 51974858 51975153 -93614135 - AluSx SINE Alu -17 295 3 5578 190 38 36 chr10 51975155 51975512 -93613776 - L1M3 LINE L1 -513 5670 5315 2073 151 0 0 chr10 51975512 51975810 -93613478 - AluSx SINE Alu -14 298 1 2403 71 7 0 chr10 51975818 51976114 -93613174 - AluY SINE Alu -13 298 1 5578 190 38 36 chr10 51976114 51976686 -93612602 - L1M3 LINE L1 -874 5309 4740 2368 88 0 3 chr10 51976686 51976981 -93612307 - AluSg SINE Alu -16 294 1 5578 190 38 36 chr10 51976981 51977704 -93611584 - L1M3 LINE L1 -1443 4740 3986 467 241 58 0 chr10 51977709 51977846 -93611442 - MIR SINE MIR -11 251 107 27 62 0 0 chr10 51977910 51977958 -93611330 + AT_rich Low_complexity Low_complexity 1 48 0 478 152 152 0 chr10 51978094 51978186 -93611102 - FRAM SINE Alu -13 163 58 1536 122 10 0 chr10 51978231 51978436 -93610852 + AluSq SINE Alu 1 207 -106 180 0 0 0 chr10 51978487 51978507 -93610781 + (T)n Simple_repeat Simple_repeat 1 20 0 239 313 21 0 chr10 51981074 51981170 -93608118 - L2 LINE L2 -991 2323 2226 388 205 6 24 chr10 51982221 51982387 -93606901 + (TG)n Simple_repeat Simple_repeat 2 164 0 235 180 93 43 chr10 51982492 51982653 -93606635 + (AGCTG)n Simple_repeat Simple_repeat 4 172 0 * 427 209 30 76 chr10 51982620 51982996 -93606292 + (AGGTG)n Simple_repeat Simple_repeat 1 358 0 504 225 47 0 chr10 51983055 51983224 -93606064 + (AGGTG)n Simple_repeat Simple_repeat 3 179 0 493 226 48 0 chr10 51983264 51983432 -93605856 + (AGGTG)n Simple_repeat Simple_repeat 4 179 0 1553 178 101 14 chr10 51985045 51985400 -93603888 + MLT1B LTR MaLR 5 390 0 1531 201 33 41 chr10 51986750 51987118 -93602170 - MLT1A1 LTR MaLR 0 365 1 1128 143 0 82 chr10 51987121 51987352 -93601936 + MLT2B2 LTR ERVL 304 515 0 258 32 0 0 chr10 51987429 51987460 -93601828 + (GA)n Simple_repeat Simple_repeat 2 32 0 325 263 25 25 chr10 51990340 51990458 -93598830 + MIR SINE MIR 32 149 -113 815 283 77 17 chr10 51991951 51992339 -93596949 + L1P5 LINE L1 4 1136 -6449 418 286 55 25 chr10 51992859 51993097 -93596191 + L1M2 LINE L1 819 1063 -5786 375 329 24 37 chr10 51993272 51993662 -93595626 + L1P5 LINE L1 1735 2213 -5371 500 263 70 0 chr10 51993685 51993841 -93595447 + L1M2 LINE L1 62 228 -6621 3238 164 116 3 chr10 51993841 51994608 -93594680 + L1P5 LINE L1 2225 3078 -4506 2962 149 11 2 chr10 51994608 51995199 -93594089 + L1P5 LINE L1 6640 7234 -360 385 235 188 42 chr10 51995365 51995578 -93593710 - L2 LINE L2 -549 2765 2522 966 330 158 9 chr10 51995582 51996215 -93593073 - L2 LINE L2 -2295 1019 293 39 0 0 0 chr10 51996434 51996473 -93592815 + AT_rich Low_complexity Low_complexity 1 39 0 267 325 125 25 chr10 51996527 51996647 -93592641 + MIR SINE MIR 47 178 -84 26 30 0 0 chr10 51996673 51996706 -93592582 + AT_rich Low_complexity Low_complexity 1 33 0 33 0 0 0 chr10 51996777 51996810 -93592478 + AT_rich Low_complexity Low_complexity 1 33 0 288 356 34 0 chr10 51996849 51996995 -93592293 - L1ME3 LINE L1 -17 6145 5995 1092 280 33 9 chr10 51997015 51997444 -93591844 - L1ME3 LINE L1 -243 5919 5481 754 143 0 17 chr10 51997449 51997568 -93591720 - FRAM SINE Alu -19 157 41 545 278 12 3 chr10 51997574 51997861 -93591427 - L1ME3 LINE L1 -678 5486 5194 2475 178 44 4 chr10 51997861 51998361 -93590927 - L1MB1 LINE L1 0 6168 5649 730 164 90 5 chr10 51998376 51998565 -93590723 - L1MB1 LINE L1 -698 5470 5266 295 254 77 53 chr10 51998616 51998785 -93590503 - L1MB1 LINE L1 -1008 5138 4966 227 250 232 0 chr10 51999011 51999067 -93590221 - MER5B DNA MER1_type -60 118 50 852 193 0 0 chr10 51999076 51999221 -93590067 - FRAM SINE Alu -30 146 2 271 254 16 0 chr10 51999222 51999285 -93590003 - MER5B DNA MER1_type -114 64 1 216 0 0 0 chr10 52000622 52000646 -93588642 + (GA)n Simple_repeat Simple_repeat 1 24 0 27 49 0 0 chr10 52001018 52001059 -93588229 + AT_rich Low_complexity Low_complexity 1 41 0 406 258 170 0 chr10 52001122 52001304 -93587984 - L1MB1 LINE L1 -1557 4589 4377 1257 198 3 58 chr10 52001305 52001618 -93587670 - AluJo SINE Alu -16 296 1 1896 245 66 51 chr10 52001651 52002525 -93586763 - L1MB1 LINE L1 -1997 4149 3253 2200 131 10 0 chr10 52002525 52002831 -93586457 - AluSq SINE Alu -3 310 2 1896 245 66 51 chr10 52002831 52003077 -93586211 - L1MB1 LINE L1 -2893 3253 3012 * 3874 220 17 18 chr10 52003057 52004065 -93585223 - L1MD1 LINE L1 0 6636 5630 280 248 50 40 chr10 52004049 52004150 -93585138 - L1MD1 LINE L1 -5549 991 890 * 1981 104 35 11 chr10 52004628 52004947 -93584341 - AluSp SINE Alu 0 313 1 360 307 49 62 chr10 52005527 52005752 -93583536 + MIR SINE MIR 41 262 0 252 345 18 42 chr10 52006140 52006308 -93582980 - MIR SINE MIR -8 254 91 21 36 0 0 chr10 52006867 52006895 -93582393 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr10 52007499 52007528 -93581760 + AT_rich Low_complexity Low_complexity 1 29 0 225 331 79 39 chr10 52008427 52008605 -93580683 - MIR SINE MIR -7 255 71 1164 218 69 49 chr10 52008641 52008989 -93580299 - MLT1A1 LTR MaLR -1 364 10 22 35 0 0 chr10 52009573 52009602 -93579686 + AT_rich Low_complexity Low_complexity 1 29 0 6505 69 19 6 chr10 52010173 52011179 -93578109 + L1PA7 LINE L1 5133 6150 -4 1690 118 118 18 chr10 52011235 52011515 -93577773 + AluSg1 SINE Alu 1 308 -1 25 0 0 0 chr10 52011515 52011540 -93577748 + AT_rich Low_complexity Low_complexity 1 25 0 244 247 21 21 chr10 52011706 52011803 -93577485 + (TCTA)n Simple_repeat Simple_repeat 4 100 0 408 304 82 7 chr10 52011976 52012111 -93577177 + MIR SINE MIR 20 164 -98 212 0 36 0 chr10 52013667 52013695 -93575593 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 336 362 37 12 chr10 52014584 52014747 -93574541 - L2 LINE L2 0 3272 3106 3225 155 54 28 chr10 52014750 52015384 -93573904 + MER39B LTR ERV1 4 653 0 2137 96 6 51 chr10 52015679 52015993 -93573295 + AluSc SINE Alu 1 300 -9 224 325 25 12 chr10 52015997 52016077 -93573211 - MIR3 SINE MIR -124 84 4 263 277 71 36 chr10 52017136 52017248 -93572040 - MER58B DNA MER1_type 0 341 226 276 319 64 20 chr10 52017369 52017573 -93571715 + L1M4 LINE L1 48 260 -6282 300 346 96 59 chr10 52017653 52017977 -93571311 + L1M4 LINE L1 350 685 -5857 695 62 10 0 chr10 52018021 52018118 -93571170 - L1PA11 LINE L1 -1 6173 6076 1965 114 6 60 chr10 52019933 52020249 -93569039 + AluSg SINE Alu 1 299 -11 311 256 0 13 chr10 52021047 52021125 -93568163 + Charlie1 DNA MER1_type 1 77 -2684 2344 105 0 0 chr10 52021126 52021431 -93567857 - AluSq SINE Alu -8 305 1 1991 226 168 19 chr10 52021499 52021859 -93567429 + Charlie1 DNA MER1_type 88 393 -2368 1243 172 101 30 chr10 52021859 52022127 -93567161 + AluJo SINE Alu 1 287 -25 1991 226 168 19 chr10 52022127 52022604 -93566684 + Charlie1 DNA MER1_type 393 797 -1964 2183 119 3 0 chr10 52022604 52022899 -93566389 - AluSx SINE Alu -12 300 5 1991 226 168 19 chr10 52022899 52022913 -93566375 + Charlie1 DNA MER1_type 797 808 -1953 2130 120 0 0 chr10 52022913 52023212 -93566076 - AluY SINE Alu -12 299 1 1991 226 168 19 chr10 52023212 52023378 -93565910 + Charlie1 DNA MER1_type 808 2580 -181 691 244 6 0 chr10 52023394 52023550 -93565738 + MER20 DNA MER1_type 60 216 -3 661 270 0 0 chr10 52024172 52024331 -93564957 - FRAM SINE Alu -6 160 2 1217 92 0 0 chr10 52024361 52024513 -93564775 - AluSp SINE Alu -32 281 130 329 156 86 117 chr10 52024662 52024790 -93564498 - MIR3 SINE MIR -1 207 84 586 251 40 23 chr10 52024828 52025003 -93564285 - MER5B DNA MER1_type 0 178 1 2378 80 0 0 chr10 52026827 52027128 -93562160 + AluY SINE Alu 2 302 -9 2445 61 0 0 chr10 52027202 52027496 -93561792 - AluY SINE Alu -17 294 1 3080 190 0 30 chr10 52028596 52029292 -93559996 - L1 LINE L1 -1685 4461 3786 2127 72 0 87 chr10 52029292 52029613 -93559675 - AluSg SINE Alu -17 293 1 3080 190 0 30 chr10 52029613 52029638 -93559650 - L1 LINE L1 -2360 3786 3762 3218 206 23 9 chr10 52029639 52030467 -93558821 + L1PB1 LINE L1 4459 5300 -846 2629 110 37 5 chr10 52030467 52030519 -93558769 + L1PB1 LINE L1 5709 5758 -393 264 59 0 0 chr10 52030519 52030553 -93558735 + (TA)n Simple_repeat Simple_repeat 2 35 0 2629 110 37 5 chr10 52030553 52030908 -93558380 + L1PB1 LINE L1 5758 6150 -1 3218 206 23 9 chr10 52030908 52030919 -93558369 + L1PB1 LINE L1 5300 5309 -837 1244 158 5 23 chr10 52031032 52031247 -93558041 - AluJo SINE Alu -15 297 87 385 325 182 48 chr10 52031495 52031935 -93557353 + HAL1 LINE L1 4 502 -2005 264 294 195 7 chr10 52031974 52032256 -93557032 + HAL1 LINE L1 576 910 -1597 300 260 34 48 chr10 52032317 52032525 -93556763 + HAL1 LINE L1 1087 1291 -1216 407 271 124 37 chr10 52032546 52032764 -93556524 + HAL1 LINE L1 1367 1603 -904 242 368 15 0 chr10 52032791 52032992 -93556296 + HAL1 LINE L1 1699 1902 -605 328 181 56 0 chr10 52033320 52033392 -93555896 + HAL1 LINE L1 2097 2172 -335 2334 106 3 0 chr10 52033560 52033863 -93555425 - AluSx SINE Alu -8 304 1 33 25 0 0 chr10 52034256 52034296 -93554992 + AT_rich Low_complexity Low_complexity 1 40 0 2089 135 0 10 chr10 52034704 52035008 -93554280 - AluY SINE Alu -10 301 1 1699 204 55 22 chr10 52035301 52035482 -93553806 + MSTB LTR MaLR 1 175 -251 2237 124 0 0 chr10 52035482 52035781 -93553507 + AluSx SINE Alu 1 299 -13 1699 204 55 22 chr10 52035781 52036000 -93553288 + MSTB LTR MaLR 175 414 -12 607 193 7 57 chr10 52037015 52037155 -93552133 + FLAM_A SINE Alu 1 133 0 2235 103 0 19 chr10 52038077 52038387 -93550901 - AluSx SINE Alu -8 304 1 431 283 183 5 chr10 52040937 52041128 -93548160 - MIR SINE MIR -3 259 35 1431 148 17 148 chr10 52041158 52041410 -93547878 - THE1B LTR MaLR 0 364 186 1880 155 0 0 chr10 52041410 52041714 -93547574 + AluSx SINE Alu 1 304 0 1431 148 17 148 chr10 52041714 52041879 -93547409 - THE1B LTR MaLR -178 186 1 324 0 0 0 chr10 52041924 52041960 -93547328 + (ATG)n Simple_repeat Simple_repeat 2 37 0 241 94 0 0 chr10 52041962 52041994 -93547294 - Alu SINE Alu -16 287 256 388 194 9 65 chr10 52041994 52042102 -93547186 - L1M4 LINE L1 -1763 4383 4282 1677 102 117 8 chr10 52042107 52042373 -93546915 - AluSc SINE Alu -14 295 1 1774 132 30 20 chr10 52042396 52042692 -93546596 - AluSx SINE Alu -10 302 4 206 211 0 0 chr10 52042742 52042780 -93546508 - MIR SINE MIR -9 253 216 241 337 74 0 chr10 52043780 52043875 -93545413 + L2 LINE L2 3155 3256 -16 265 346 82 13 chr10 52043986 52044217 -93545071 - L2 LINE L2 -1471 1843 1597 1217 115 6 6 chr10 52044381 52044563 -93544725 - AluY SINE Alu -15 296 115 2701 19 0 16 chr10 52044664 52044987 -93544301 + L1PA2 LINE L1 5833 6150 -5 264 270 0 0 chr10 52046085 52046159 -93543129 + L1MC4 LINE L1 7246 7319 -723 * 1550 209 58 82 chr10 52046151 52046458 -93542830 + L1MC4 LINE L1 7534 7847 -195 1816 104 0 0 chr10 52046458 52046707 -93542581 + AluSq SINE Alu 58 306 -7 2339 93 0 0 chr10 52046708 52047018 -93542270 + AluSg SINE Alu 1 310 0 1550 209 58 82 chr10 52047018 52047230 -93542058 + L1MC4 LINE L1 7846 8042 0 2113 112 3 7 chr10 52047578 52047882 -93541406 + AluSq SINE Alu 1 303 -10 22 0 0 0 chr10 52048110 52048132 -93541156 + AT_rich Low_complexity Low_complexity 1 22 0 1888 137 0 3 chr10 52048137 52048445 -93540843 + AluSq SINE Alu 1 307 0 2026 112 17 7 chr10 52048657 52048953 -93540335 + AluSq SINE Alu 1 299 -14 2267 78 3 0 chr10 52049504 52049797 -93539491 + AluSx SINE Alu 1 294 -18 321 156 13 91 chr10 52049981 52050058 -93539230 + L1ME LINE L1 5681 5751 -415 220 354 77 39 chr10 52050218 52050348 -93538940 + L2 LINE L2 3122 3256 -16 231 352 74 0 chr10 52050827 52050935 -93538353 + MIR SINE MIR 25 140 -122 2045 116 0 28 chr10 52051739 52052059 -93537229 + AluSx SINE Alu 2 312 0 370 200 14 0 chr10 52052410 52052480 -93536808 + MER58 DNA MER1_type 2349 2419 -1 1799 164 0 0 chr10 52053464 52053756 -93535532 + AluJb SINE Alu 1 292 -20 589 180 16 16 chr10 52053813 52053935 -93535353 + L1MB7 LINE L1 6044 6165 -19 2014 111 0 26 chr10 52054127 52054292 -93534996 - AluSx SINE Alu -14 298 143 2253 84 10 10 chr10 52054292 52054601 -93534687 - AluY SINE Alu -2 309 1 2014 111 0 26 chr10 52054601 52054741 -93534547 - AluSx SINE Alu -169 143 1 27 0 0 0 chr10 52054748 52054775 -93534513 + AT_rich Low_complexity Low_complexity 1 27 0 259 224 13 26 chr10 52054968 52055044 -93534244 + L1ME LINE L1 5603 5677 -444 311 116 0 0 chr10 52055166 52055209 -93534079 + Alu SINE Alu 2 44 -256 1786 119 0 81 chr10 52055209 52055529 -93533759 + AluSq SINE Alu 14 307 -6 357 272 144 50 chr10 52055533 52055735 -93533553 + L1 LINE L1 4639 4859 -1287 1009 146 15 34 chr10 52055828 52056033 -93533255 + AluJo SINE Alu 104 304 -8 189 0 0 0 chr10 52056489 52056510 -93532778 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 2116 67 21 7 chr10 52056514 52056798 -93532490 - AluY SINE Alu -23 288 1 184 309 103 0 chr10 52057402 52057470 -93531818 - L2 LINE L2 -2 3270 3196 211 299 163 27 chr10 52057620 52057767 -93531521 - L2 LINE L2 -276 3037 2871 761 128 96 0 chr10 52057997 52058122 -93531166 - MER85 DNA T2_type -2 137 1 2315 79 3 7 chr10 52058651 52058955 -93530333 + AluY SINE Alu 2 304 -7 460 183 0 0 chr10 52059188 52059259 -93530029 + AluJ/FLAM SINE Alu 2 72 -240 1501 141 0 33 chr10 52059259 52059529 -93529759 + AluSx SINE Alu 41 301 -11 2377 58 0 0 chr10 52059833 52060128 -93529160 + AluY SINE Alu 2 296 -15 192 77 0 0 chr10 52060627 52060653 -93528635 + (TCC)n Simple_repeat Simple_repeat 2 27 0 2152 95 0 0 chr10 52060720 52061048 -93528240 + AluSq SINE Alu 1 328 0 1115 265 131 14 chr10 52061112 52061539 -93527749 + LTR33 LTR ERVL 44 520 -1 256 143 0 0 chr10 52063116 52063158 -93526130 + MER69 DNA AcHobo 2453 2494 -32 256 105 0 0 chr10 52063677 52063715 -93525573 - MIR SINE MIR -112 150 113 2017 130 0 0 chr10 52065206 52065513 -93523775 - AluSx SINE Alu -5 307 1 356 172 34 29 chr10 52065679 52065775 -93523513 - AluS SINE Alu -225 78 20 468 254 78 54 chr10 52069716 52069881 -93519407 - HsTC2 DNA Tc2 -173 1725 1553 740 273 88 0 chr10 52069881 52070086 -93519202 + MER58A DNA MER1_type 2 224 0 468 254 78 54 chr10 52070086 52070125 -93519163 - HsTC2 DNA Tc2 -345 1553 1516 1302 190 6 84 chr10 52070145 52070466 -93518822 - AluJo SINE Alu -16 296 1 1198 247 103 23 chr10 52070495 52070892 -93518396 - HsTC2 DNA Tc2 -1467 431 3 193 274 74 63 chr10 52070901 52070996 -93518292 + MIR SINE MIR 158 253 -9 184 222 22 22 chr10 52070962 52071007 -93518281 + L2 LINE L2 3224 3268 -4 * 1995 107 7 3 chr10 52071196 52071487 -93517801 - AluSq SINE Alu -1 312 21 180 0 0 0 chr10 52072633 52072653 -93516635 + (TA)n Simple_repeat Simple_repeat 2 21 0 2201 66 9 44 chr10 52072655 52072975 -93516313 - AluY SINE Alu 0 311 3 417 235 8 45 chr10 52073043 52073175 -93516113 - L1MC5 LINE L1 -163 7798 7672 884 178 144 0 chr10 52073378 52073558 -93515730 - AluJb SINE Alu -26 286 81 562 175 21 0 chr10 52073600 52073697 -93515591 - AluJo SINE Alu -176 136 38 321 336 52 8 chr10 52073903 52074037 -93515251 + L2 LINE L2 3169 3308 -5 2181 90 3 7 chr10 52074073 52074373 -93514915 - AluY SINE Alu -12 299 1 518 280 19 32 chr10 52074373 52074530 -93514758 - L2 LINE L2 -7 3306 3152 418 280 8 17 chr10 52074535 52074653 -93514635 + MIR3 SINE MIR 50 166 -42 2507 238 47 14 chr10 52075353 52075988 -93513300 + L1ME1 LINE L1 5506 6161 -5 339 270 43 70 chr10 52076039 52076224 -93513064 + MIR SINE MIR 80 259 -3 249 350 31 0 chr10 52076584 52076681 -93512607 - MIR3 SINE MIR -21 187 88 948 285 73 9 chr10 52076723 52077063 -93512225 - LTR16B LTR ERVL 0 464 103 1326 199 19 0 chr10 52077063 52077319 -93511969 - AluJo SINE Alu -51 261 1 703 263 6 17 chr10 52077357 52077536 -93511752 - MER20 DNA MER1_type 0 219 43 283 292 161 65 chr10 52077560 52077882 -93511406 - L2 LINE L2 -30 3283 2931 1882 159 0 3 chr10 52078051 52078352 -93510936 + AluSx SINE Alu 1 300 -12 5801 196 68 25 chr10 52078352 52080273 -93509015 - L1MB8 LINE L1 -10 6168 4118 1913 125 3 7 chr10 52080273 52080561 -93508727 - AluSq SINE Alu -22 291 5 5801 196 68 25 chr10 52080561 52081087 -93508201 - L1MB8 LINE L1 -2060 4118 3616 227 340 58 51 chr10 52081354 52081510 -93507778 + L2 LINE L2 2315 2471 -843 2100 99 0 0 chr10 52081556 52081863 -93507425 - AluSg SINE Alu 0 307 1 4733 159 75 14 chr10 52082233 52083120 -93506168 - L1MC1 LINE L1 0 6333 5392 290 350 6 49 chr10 52083121 52083284 -93506004 + L2 LINE L2 2690 2845 -469 2195 119 0 0 chr10 52083522 52083833 -93505455 - AluY SINE Alu 0 311 1 265 265 15 0 chr10 52083876 52083944 -93505344 + L2 LINE L2 3245 3313 0 2166 152 52 40 chr10 52084041 52084270 -93505018 - MSTB LTR MaLR 0 426 188 2038 122 0 3 chr10 52084270 52084565 -93504723 - AluSc SINE Alu -15 294 1 2166 152 52 40 chr10 52084565 52084756 -93504532 - MSTB LTR MaLR -238 188 1 1573 193 0 10 chr10 52086012 52086317 -93502971 + AluJo SINE Alu 1 302 -10 2156 102 0 3 chr10 52086653 52086958 -93502330 + AluY SINE Alu 1 304 -7 220 224 408 16 chr10 52087551 52087675 -93501613 + MER5A DNA MER1_type 10 182 -7 486 238 10 134 chr10 52087675 52087815 -93501473 + MER5B DNA MER1_type 2 111 -67 2094 119 0 3 chr10 52087815 52088125 -93501163 - AluSx SINE Alu -3 309 1 486 238 10 134 chr10 52088125 52088186 -93501102 + MER5B DNA MER1_type 111 178 0 1616 119 0 25 chr10 52088194 52088430 -93500858 - MER30 DNA MER1_type 0 230 1 2038 110 20 7 chr10 52088796 52089097 -93500191 - AluSp SINE Alu -8 305 1 1248 238 65 31 chr10 52089515 52090015 -93499273 + MER39 LTR ERV1 3 563 -2 351 271 182 14 chr10 52091262 52091476 -93497812 - MIR SINE MIR -11 251 2 1016 201 22 25 chr10 52091661 52092021 -93497267 + Tigger2 DNA MER2_type 1 2705 -13 2063 129 34 0 chr10 52092091 52092385 -93496903 + AluSx SINE Alu 1 304 -8 2353 63 0 7 chr10 52093172 52093472 -93495816 - AluY SINE Alu -13 298 1 24 32 0 0 chr10 52093482 52093513 -93495775 + AT_rich Low_complexity Low_complexity 1 31 0 2224 128 3 0 chr10 52093601 52093913 -93495375 + AluSq SINE Alu 1 313 0 658 260 119 26 chr10 52094657 52095103 -93494185 + MLT1H1 LTR MaLR 35 542 -7 279 293 151 48 chr10 52095155 52095507 -93493781 - L2 LINE L2 -10 3303 2916 2057 145 3 0 chr10 52096272 52096576 -93492712 - AluSx SINE Alu -7 305 1 227 203 72 43 chr10 52097208 52097277 -93492011 + L1MC4 LINE L1 6932 7002 -1040 346 75 0 19 chr10 52097286 52097339 -93491949 + AluJb SINE Alu 88 139 -163 1067 279 88 23 chr10 52097381 52097986 -93491302 + L1MC4 LINE L1 7008 7651 -391 1259 116 53 0 chr10 52098063 52098252 -93491036 + MER1B DNA MER1_type 1 199 -98 246 94 0 0 chr10 52098270 52098302 -93490986 + MER1B DNA MER1_type 308 339 0 380 266 58 110 chr10 52098399 52098764 -93490524 + L1MC4 LINE L1 7695 8040 -2 2340 93 3 0 chr10 52099395 52099696 -93489592 + AluSx SINE Alu 1 302 -10 248 258 164 23 chr10 52099896 52100024 -93489264 - L1MC/D LINE L1 -1922 5886 5741 362 169 0 0 chr10 52100534 52100593 -93488695 + MER5A DNA MER1_type 51 109 -80 236 341 72 42 chr10 52100681 52101109 -93488179 + L3 LINE CR1 1098 1538 -39 228 67 0 0 chr10 52101213 52101243 -93488045 + (CAT)n Simple_repeat Simple_repeat 3 32 0 773 124 7 58 chr10 52102480 52102617 -93486671 + AluSq/x SINE Alu 4 133 -179 2195 114 0 3 chr10 52104270 52104569 -93484719 - AluSg SINE Alu -12 298 1 2090 126 16 7 chr10 52106414 52106724 -93482564 - AluSq SINE Alu 0 313 1 199 75 132 57 chr10 52107112 52107165 -93482123 - MIR SINE MIR -32 230 174 2043 157 0 0 chr10 52107255 52107561 -93481727 + AluSx SINE Alu 1 306 -6 186 227 0 0 chr10 52107751 52107795 -93481493 + (TG)n Simple_repeat Simple_repeat 2 45 0 1286 182 101 8 chr10 52107873 52108131 -93481157 - AluJb SINE Alu -25 287 6 517 238 133 6 chr10 52108193 52108374 -93480914 + MIR SINE MIR 59 262 0 264 271 179 14 chr10 52109147 52109287 -93480001 - MIR SINE MIR -18 244 82 1371 168 36 36 chr10 52110809 52111089 -93478199 - AluJo SINE Alu -30 282 3 2236 74 32 3 chr10 52111219 52111504 -93477784 + AluSg SINE Alu 1 293 -17 288 138 40 36 chr10 52112805 52112882 -93476406 + AluSp SINE Alu 121 181 -122 3180 183 56 17 chr10 52113017 52113679 -93475609 + L1MB8 LINE L1 5476 6163 -15 21 36 0 0 chr10 52113948 52113976 -93475312 + AT_rich Low_complexity Low_complexity 1 28 0 2039 125 4 0 chr10 52114020 52114339 -93474949 - AluSx SINE Alu 0 320 1 315 258 157 13 chr10 52114851 52115010 -93474278 - L1MC/D LINE L1 -1991 5817 5636 375 262 174 37 chr10 52120398 52120719 -93468569 - L2 LINE L2 -3 3310 2946 314 256 116 60 chr10 52121858 52122220 -93467068 - L1MC4a LINE L1 -104 6017 5618 940 203 0 40 chr10 52123382 52123584 -93465704 + MER58A DNA MER1_type 27 220 -4 364 218 23 23 chr10 52123689 52123776 -93465512 + MER3 DNA MER1_type 1 87 -122 2443 77 0 0 chr10 52124398 52124696 -93464592 - AluY SINE Alu -13 298 1 1654 181 20 20 chr10 52125027 52125326 -93463962 - AluJo SINE Alu -13 299 1 261 139 0 0 chr10 52125361 52125404 -93463884 + (T)n Simple_repeat Simple_repeat 1 43 0 2269 142 53 31 chr10 52126635 52126825 -93462463 + MSTB LTR MaLR 1 185 -241 2101 110 0 4 chr10 52126825 52127132 -93462156 + AluSc SINE Alu 1 306 0 2269 142 53 31 chr10 52127132 52127357 -93461931 + MSTB LTR MaLR 185 426 0 254 254 15 0 chr10 52127453 52127520 -93461768 - L2 LINE L2 -1 3271 3204 2519 90 0 0 chr10 52127563 52127874 -93461414 + AluY SINE Alu 1 311 0 323 319 6 49 chr10 52128116 52128279 -93461009 - L2 LINE L2 -469 2845 2690 4768 164 75 11 chr10 52128280 52129166 -93460122 + L1MC1 LINE L1 5392 6333 0 2211 103 0 0 chr10 52129535 52129842 -93459446 + AluSg SINE Alu 1 307 0 6168 188 71 25 chr10 52130304 52130822 -93458466 + L1MB8 LINE L1 3616 4109 -2069 2123 108 11 0 chr10 52130822 52131109 -93458179 + AluSx SINE Alu 5 294 -18 6168 188 71 25 chr10 52131109 52133031 -93456257 + L1MB8 LINE L1 4109 6168 -10 1957 163 0 3 chr10 52133031 52133332 -93455956 - AluSx SINE Alu -12 300 1 296 197 82 107 chr10 52133700 52133822 -93455466 + L2 LINE L2 3165 3283 -30 700 251 5 21 chr10 52133865 52134052 -93455236 + MER20 DNA MER1_type 36 219 0 1353 210 16 0 chr10 52134090 52134347 -93454941 + AluJo SINE Alu 1 261 -51 918 285 73 9 chr10 52134347 52134687 -93454601 + LTR16B LTR ERVL 103 464 0 212 350 31 0 chr10 52134729 52134826 -93454462 + MIR3 SINE MIR 88 187 -21 262 267 47 68 chr10 52135186 52135377 -93453911 - MIR SINE MIR -3 259 73 2529 234 47 11 chr10 52135416 52136057 -93453231 - L1MB7 LINE L1 -10 6174 5511 343 288 8 17 chr10 52136745 52136863 -93452425 - MIR3 SINE MIR -42 166 50 440 282 19 32 chr10 52136868 52137024 -93452264 + L2 LINE L2 3152 3305 -8 2286 83 0 48 chr10 52137025 52137339 -93451949 + AluY SINE Alu 1 299 -12 280 279 58 0 chr10 52137394 52137480 -93451808 - L2 LINE L2 -24 3248 3158 574 165 21 0 chr10 52137715 52137812 -93451476 + AluJo SINE Alu 38 136 -176 1467 141 0 0 chr10 52137856 52138062 -93451226 + AluJb SINE Alu 81 286 -26 432 236 0 28 chr10 52138291 52138397 -93450891 + L1MC5 LINE L1 7696 7798 -163 2360 97 3 0 chr10 52138463 52138773 -93450515 + AluY SINE Alu 1 311 0 2110 103 7 3 chr10 52139974 52140266 -93449022 + AluSq SINE Alu 21 313 0 1854 152 0 0 chr10 52144223 52144493 -93444795 + AluSx SINE Alu 24 293 -19 384 22 0 0 chr10 52144495 52144540 -93444748 + (GA)n Simple_repeat Simple_repeat 1 45 0 620 301 171 11 chr10 52144587 52145056 -93444232 - L1MC/D LINE L1 -1991 5817 5274 2207 109 0 0 chr10 52145087 52145394 -93443894 - AluSx SINE Alu 0 307 1 9350 36 11 1 chr10 52145902 52147784 -93441504 + L1PA4 LINE L1 4255 6154 -1 635 310 25 8 chr10 52148908 52149147 -93440141 - MIR SINE MIR -5 257 15 3208 151 35 14 chr10 52149236 52149900 -93439388 + MER50 LTR ERV1 1 711 -23 912 364 6 3 chr10 52149905 52150251 -93439037 + LTR16B LTR ERVL 105 451 -13 993 301 66 42 chr10 52150705 52151280 -93438008 + MERVL LTR ERVL 468 1062 -3934 2140 206 48 40 chr10 52151280 52151779 -93437509 - MLT1D LTR MaLR -2 503 1 993 301 66 42 chr10 52151779 52151860 -93437428 + MERVL LTR ERVL 1062 1140 -3856 609 272 17 28 chr10 52151857 52152037 -93437251 + MERVL LTR ERVL 1915 2092 -2904 * 317 304 41 18 chr10 52152184 52152355 -93436933 + MERVL LTR ERVL 3141 3315 -2449 442 310 84 15 chr10 52154090 52154293 -93434995 + MIR SINE MIR 13 229 -33 553 266 25 0 chr10 52154332 52154490 -93434798 + MER103 DNA DNA 5 166 0 823 182 6 48 chr10 52154734 52154899 -93434389 + FRAM SINE Alu 1 157 -19 1144 120 5 58 chr10 52155499 52155690 -93433598 - AluY SINE Alu -130 181 1 2296 108 3 0 chr10 52155771 52156078 -93433210 + AluY SINE Alu 1 308 -3 1974 120 9 48 chr10 52157988 52158304 -93430984 + AluSg SINE Alu 1 304 -6 285 266 0 25 chr10 52159102 52159181 -93430107 + Charlie1 DNA MER1_type 1 77 -2684 2420 102 0 0 chr10 52159182 52159495 -93429793 - AluSq SINE Alu 0 313 1 1711 217 155 20 chr10 52159561 52159926 -93429362 + Charlie1 DNA MER1_type 86 400 -2361 1243 172 101 30 chr10 52159926 52160194 -93429094 + AluJo SINE Alu 1 287 -25 1711 217 155 20 chr10 52160194 52160671 -93428617 + Charlie1 DNA MER1_type 400 811 -1950 2180 119 3 0 chr10 52160671 52160966 -93428322 - AluSx SINE Alu -12 300 5 1711 217 155 20 chr10 52160966 52160980 -93428308 + Charlie1 DNA MER1_type 811 822 -1939 2097 132 0 0 chr10 52160980 52161283 -93428005 - AluY SINE Alu -8 303 1 1711 217 155 20 chr10 52161283 52161449 -93427839 + Charlie1 DNA MER1_type 822 2580 -181 755 244 6 0 chr10 52161465 52161621 -93427667 + MER20 DNA MER1_type 60 216 -3 236 241 60 30 chr10 52161623 52161756 -93427532 + Charlie1 DNA MER1_type 2610 2746 -15 655 270 0 0 chr10 52162242 52162401 -93426887 - FRAM SINE Alu -6 160 2 1249 92 0 0 chr10 52162427 52162579 -93426709 - AluSp SINE Alu -32 281 130 285 156 86 117 chr10 52162728 52162856 -93426432 - MIR3 SINE MIR -1 207 84 541 251 46 29 chr10 52162894 52163069 -93426219 - MER5B DNA MER1_type 0 178 1 2083 133 0 0 chr10 52164893 52165187 -93424101 + AluY SINE Alu 2 295 -16 234 238 61 121 chr10 52165187 52165418 -93423870 - HAL1 LINE L1 -871 1636 1420 * 344 304 74 27 chr10 52165414 52165750 -93423538 - L1MEd LINE L1 -4902 1217 866 2537 68 0 0 chr10 52167005 52167313 -93421975 - AluY SINE Alu -3 308 1 3432 187 0 30 chr10 52168413 52169109 -93420179 - L1 LINE L1 -1685 4461 3786 2357 84 0 7 chr10 52169109 52169405 -93419883 - AluSg SINE Alu -16 294 1 3432 187 0 30 chr10 52169405 52169430 -93419858 - L1 LINE L1 -2360 3786 3762 3566 207 23 9 chr10 52169431 52170259 -93419029 + L1PB1 LINE L1 4459 5300 -846 2711 112 37 5 chr10 52170259 52170311 -93418977 + L1PB1 LINE L1 5709 5758 -393 192 77 0 0 chr10 52170311 52170337 -93418951 + (TA)n Simple_repeat Simple_repeat 2 27 0 2711 112 37 5 chr10 52170337 52170692 -93418596 + L1PB1 LINE L1 5758 6150 -1 3566 207 23 9 chr10 52170692 52170703 -93418585 + L1PB1 LINE L1 5300 5309 -837 1225 158 5 23 chr10 52170815 52171030 -93418258 - AluJo SINE Alu -15 297 87 582 313 172 33 chr10 52171278 52172312 -93416976 + HAL1 LINE L1 4 1293 -1214 243 251 120 34 chr10 52172331 52172506 -93416782 + HAL1 LINE L1 1367 1556 -951 243 382 14 0 chr10 52172573 52172785 -93416503 + HAL1 LINE L1 1696 1910 -597 357 181 56 0 chr10 52173105 52173177 -93416111 + HAL1 LINE L1 2097 2172 -335 2239 118 3 0 chr10 52173345 52173642 -93415646 - AluSx SINE Alu -14 298 1 26 50 0 0 chr10 52174036 52174076 -93415212 + AT_rich Low_complexity Low_complexity 1 40 0 1967 147 0 10 chr10 52174485 52174784 -93414504 - AluY SINE Alu -15 296 1 1912 199 50 22 chr10 52175074 52175255 -93414033 + MSTB LTR MaLR 1 176 -250 2211 131 0 0 chr10 52175255 52175552 -93413736 + AluSx SINE Alu 1 297 -15 1912 199 50 22 chr10 52175552 52175773 -93413515 + MSTB LTR MaLR 176 414 -12 656 177 7 64 chr10 52176782 52176923 -93412365 + FLAM_A SINE Alu 1 133 0 2278 100 0 16 chr10 52177839 52178148 -93411140 - AluSx SINE Alu -8 304 1 200 234 0 21 chr10 52179724 52179771 -93409517 + (CCCCAG)n Simple_repeat Simple_repeat 4 49 0 317 285 188 5 chr10 52180710 52180896 -93408392 - MIR SINE MIR -3 259 40 1229 180 82 96 chr10 52180937 52181185 -93408103 - THE1C LTR MaLR -6 422 167 2006 155 0 0 chr10 52181185 52181489 -93407799 + AluSx SINE Alu 1 304 0 1229 180 82 96 chr10 52181489 52181654 -93407634 - THE1C LTR MaLR -261 167 1 230 100 0 0 chr10 52181715 52181772 -93407516 - AluSp/q SINE Alu 0 312 256 394 194 9 65 chr10 52181772 52181880 -93407408 - L1M4 LINE L1 -1763 4383 4282 1756 106 117 8 chr10 52181885 52182149 -93407139 - AluSc SINE Alu -16 293 1 1912 125 30 20 chr10 52182172 52182467 -93406821 - AluSx SINE Alu -11 301 4 188 211 0 0 chr10 52182517 52182555 -93406733 - MIR SINE MIR -9 253 216 211 337 74 0 chr10 52183556 52183651 -93405637 + L2 LINE L2 3155 3256 -16 188 346 82 13 chr10 52183762 52183993 -93405295 - L2 LINE L2 -1471 1843 1597 2303 92 3 0 chr10 52184157 52184452 -93404836 - AluY SINE Alu -15 296 1 234 0 0 0 chr10 52184459 52184485 -93404803 + (A)n Simple_repeat Simple_repeat 1 26 0 2341 93 0 19 chr10 52186587 52186900 -93402388 + AluSx SINE Alu 1 307 -5 1076 172 31 66 chr10 52187514 52187770 -93401518 + AluJb SINE Alu 21 267 -45 1610 198 16 39 chr10 52187791 52188155 -93401133 + MER93b LTR ERV1 1 356 -17 370 318 15 8 chr10 52188155 52188287 -93401001 + L1MC1 LINE L1 6201 6333 0 254 262 19 48 chr10 52188561 52188664 -93400624 + 5S rRNA rRNA 20 119 -2 369 0 0 0 chr10 52188702 52188743 -93400545 + (CA)n Simple_repeat Simple_repeat 2 42 0 332 102 0 17 chr10 52189371 52189430 -93399858 + (CA)n Simple_repeat Simple_repeat 2 59 0 678 181 0 114 chr10 52190552 52190762 -93398526 - L1M3 LINE L1 -727 5441 5256 2394 111 0 0 chr10 52190803 52191110 -93398178 - AluSp SINE Alu -6 307 1 2008 107 26 0 chr10 52191156 52191428 -93397860 - AluSx SINE Alu -33 279 1 1339 226 83 65 chr10 52191872 52191991 -93397297 + MLT1D LTR MaLR 1 116 -389 1521 222 73 6 chr10 52191991 52192333 -93396955 + MLT1A1 LTR MaLR 1 365 0 1339 226 83 65 chr10 52192333 52192709 -93396579 + MLT1D LTR MaLR 116 505 0 472 52 13 13 chr10 52192722 52192799 -93396489 + (CA)n Simple_repeat Simple_repeat 2 78 0 712 204 8 8 chr10 52192861 52192993 -93396295 + FLAM_A SINE Alu 1 132 -1 2275 93 10 3 chr10 52194269 52194570 -93394718 + AluSc SINE Alu 1 303 -6 1451 206 0 14 chr10 52194685 52194976 -93394312 - AluJo SINE Alu -24 288 2 658 143 38 0 chr10 52196922 52197027 -93392261 - MER65A LTR ERV1 -165 280 172 6369 69 10 21 chr10 52197028 52198664 -93390624 - SVA Other Other -723 1386 1 275 80 160 0 chr10 52198669 52198719 -93390569 - L1M3 LINE L1 -349 5834 5777 1051 150 159 44 chr10 52198719 52198946 -93390342 - AluJb SINE Alu -17 295 43 1644 167 75 0 chr10 52198958 52199240 -93390048 - AluJb SINE Alu -9 303 1 197 269 130 37 chr10 52199436 52199544 -93389744 - MIR SINE MIR -71 191 74 2279 92 0 3 chr10 52199570 52199863 -93389425 - AluY SINE Alu -19 292 1 353 230 155 50 chr10 52200404 52200565 -93388723 + Charlie8 DNA MER1_type 99 276 -2141 1662 154 54 11 chr10 52201194 52201473 -93387815 + AluJb SINE Alu 1 291 -21 2176 119 7 0 chr10 52201561 52201871 -93387417 - AluSq SINE Alu 0 313 2 266 254 0 0 chr10 52201879 52201934 -93387354 - AluJ/monomer SINE Alu -2 298 244 294 47 70 70 chr10 52201948 52202034 -93387254 + (CATTT)n Simple_repeat Simple_repeat 1 86 0 292 211 0 0 chr10 52202038 52202095 -93387193 - AluJ/monomer SINE Alu -1 301 245 257 170 0 21 chr10 52202131 52202178 -93387110 - Alu SINE Alu -11 290 245 261 246 0 0 chr10 52202214 52202271 -93387017 - AluJ/monomer SINE Alu -1 300 244 318 26 0 0 chr10 52202316 52202355 -93386933 + (CATGT)n Simple_repeat Simple_repeat 5 43 0 282 125 0 0 chr10 52202355 52202395 -93386893 - Alu SINE Alu -17 285 246 208 46 46 92 chr10 52202409 52202474 -93386814 + (CATTT)n Simple_repeat Simple_repeat 1 62 0 248 250 0 0 chr10 52202474 52202530 -93386758 - AluJ/monomer SINE Alu -1 300 245 320 68 110 0 chr10 52202544 52202617 -93386671 + (CATTT)n Simple_repeat Simple_repeat 1 81 0 274 51 64 77 chr10 52202666 52202744 -93386544 + (CATTT)n Simple_repeat Simple_repeat 1 77 0 299 182 0 0 chr10 52202744 52202799 -93386489 - Alu SINE Alu -2 300 246 271 27 68 82 chr10 52202813 52202886 -93386402 + (CATTT)n Simple_repeat Simple_repeat 1 72 0 311 179 0 0 chr10 52202886 52202942 -93386346 - Alu SINE Alu -2 298 243 256 183 0 50 chr10 52202990 52203050 -93386238 - Alu SINE Alu -1 300 244 180 0 68 91 chr10 52203055 52203099 -93386189 + (CATTT)n Simple_repeat Simple_repeat 1 43 0 239 143 0 0 chr10 52203099 52203134 -93386154 - Alu SINE Alu -22 280 246 221 75 86 54 chr10 52203142 52203192 -93386096 + (CATTT)n Simple_repeat Simple_repeat 1 48 -48 2131 113 3 0 chr10 52203192 52203475 -93385813 - AluSx SINE Alu -26 286 3 221 75 86 54 chr10 52203475 52203517 -93385771 + (CATTT)n Simple_repeat Simple_repeat 48 96 0 313 170 0 0 chr10 52203522 52203569 -93385719 - Alu SINE Alu -11 289 243 362 31 83 62 chr10 52203582 52203678 -93385610 + (CATTT)n Simple_repeat Simple_repeat 1 98 0 297 115 0 4 chr10 52203682 52203731 -93385557 - Alu SINE Alu -17 283 245 448 27 82 55 chr10 52203736 52203846 -93385442 + (CATTT)n Simple_repeat Simple_repeat 1 113 0 288 199 0 2 chr10 52203848 52203913 -93385375 - Alu SINE Alu -1 299 244 195 0 95 48 chr10 52203919 52203961 -93385327 + (CATTT)n Simple_repeat Simple_repeat 2 45 0 287 211 0 0 chr10 52203966 52204018 -93385270 - AluJ/monomer SINE Alu -6 302 251 280 204 0 0 chr10 52204089 52204143 -93385145 - AluJ/monomer SINE Alu -2 298 245 352 14 72 29 chr10 52204158 52204227 -93385061 + (CATTT)n Simple_repeat Simple_repeat 1 72 0 273 150 0 0 chr10 52204228 52204268 -93385020 - Alu SINE Alu -17 284 245 217 167 14 69 chr10 52204282 52204354 -93384934 + (CATTT)n Simple_repeat Simple_repeat 1 68 0 2169 117 3 3 chr10 52204685 52204994 -93384294 + AluSp SINE Alu 1 309 -4 503 197 58 15 chr10 52205775 52205912 -93383376 + L1MC4a LINE L1 6033 6175 -1633 485 176 92 17 chr10 52205915 52206034 -93383254 + L1MC4a LINE L1 6271 6398 -1410 923 216 73 5 chr10 52206036 52206240 -93383048 - MLT1F1 LTR MaLR -2 565 348 1330 163 5 5 chr10 52206248 52206463 -93382825 - AluJb SINE Alu -97 215 1 249 253 22 44 chr10 52206465 52206556 -93382732 + L1MC4a LINE L1 7236 7324 -484 827 164 0 27 chr10 52207031 52207177 -93382111 - FLAM_C SINE Alu 0 143 2 26 30 0 0 chr10 52207994 52208027 -93381261 + AT_rich Low_complexity Low_complexity 1 33 0 188 297 88 33 chr10 52210739 52210775 -93378513 + MIR SINE MIR 33 66 -142 1937 143 54 3 chr10 52210775 52211069 -93378219 - AluSx SINE Alu -3 309 1 188 297 88 33 chr10 52211069 52211123 -93378165 + MIR SINE MIR 66 128 -80 186 191 128 0 chr10 52211384 52211431 -93377857 - L2 LINE L2 -214 3058 3006 25 0 0 0 chr10 52211741 52211766 -93377522 + AT_rich Low_complexity Low_complexity 1 25 0 3854 243 80 27 chr10 52211867 52212209 -93377079 + L1MD2 LINE L1 3523 3845 -2301 2165 135 7 0 chr10 52212209 52212513 -93376775 + AluSx SINE Alu 1 306 -6 3854 243 80 27 chr10 52212513 52213091 -93376197 + L1MD2 LINE L1 3845 4391 -1755 2197 104 3 7 chr10 52213091 52213388 -93375900 + AluSq SINE Alu 1 296 -17 3854 243 80 27 chr10 52213388 52213593 -93375695 + L1MD2 LINE L1 4391 4584 -1562 1999 195 65 18 chr10 52213593 52214039 -93375249 + MLT1C LTR MaLR 1 467 0 3854 243 80 27 chr10 52214039 52214348 -93374940 + L1MD2 LINE L1 4584 5095 -1051 1232 143 0 63 chr10 52214457 52214680 -93374608 + AluJo SINE Alu 2 210 -102 758 186 32 0 chr10 52214681 52214805 -93374483 + AluJo SINE Alu 9 136 -176 928 133 6 25 chr10 52214805 52214963 -93374325 + AluYb8 SINE Alu 1 155 -163 1565 218 56 119 chr10 52215692 52216265 -93373023 + L1MD2 LINE L1 5706 6242 0 944 117 0 52 chr10 52216273 52216427 -93372861 + FRAM SINE Alu 20 165 -11 22 0 0 0 chr10 52216465 52216487 -93372801 + AT_rich Low_complexity Low_complexity 1 22 0 26 50 0 0 chr10 52216548 52216588 -93372700 + AT_rich Low_complexity Low_complexity 1 40 0 596 238 128 38 chr10 52216654 52216944 -93372344 - HAL1 LINE L1 -234 2273 1958 298 342 75 31 chr10 52217215 52217376 -93371912 + MIR3 SINE MIR 16 183 -25 397 62 31 0 chr10 52218332 52218397 -93370891 + (GA)n Simple_repeat Simple_repeat 2 68 0 1171 138 0 0 chr10 52218717 52218877 -93370411 - AluSg/x SINE Alu -23 287 128 1692 123 25 4 chr10 52218884 52219127 -93370161 - AluSx SINE Alu -59 253 6 2351 184 128 35 chr10 52219179 52219630 -93369658 - MLT1F1 LTR MaLR -3 564 58 2155 125 0 7 chr10 52219630 52219935 -93369353 - AluSq SINE Alu -6 307 5 2351 184 128 35 chr10 52219935 52219999 -93369289 - MLT1F1 LTR MaLR -509 58 1 3457 126 98 14 chr10 52222080 52222867 -93366421 - MER4D LTR ERV1 0 779 1 21 0 0 0 chr10 52223233 52223254 -93366034 + AT_rich Low_complexity Low_complexity 1 21 0 484 306 70 21 chr10 52223868 52224054 -93365234 - MIR SINE MIR -48 214 20 2342 106 0 6 chr10 52224816 52225128 -93364160 - AluSx SINE Alu -2 310 1 3749 212 84 8 chr10 52225130 52226044 -93363244 - L1MC4a LINE L1 -179 7629 6646 21 0 0 0 chr10 52226512 52226533 -93362755 + AT_rich Low_complexity Low_complexity 1 21 0 822 192 0 0 chr10 52227002 52227127 -93362161 - FLAM_A SINE Alu -8 125 1 715 287 88 37 chr10 52227127 52227676 -93361612 - L2 LINE L2 -242 3030 2447 242 264 0 0 chr10 52227797 52227850 -93361438 + L2 LINE L2 3219 3271 -1 289 317 96 19 chr10 52227855 52227959 -93361329 - MIR SINE MIR -66 142 31 2367 87 0 3 chr10 52228582 52228891 -93360397 - AluY SINE Alu -3 308 1 28 0 0 0 chr10 52228891 52228919 -93360369 + AT_rich Low_complexity Low_complexity 1 28 0 463 271 35 79 chr10 52229214 52229417 -93359871 - MIR SINE MIR -68 194 1 244 305 19 0 chr10 52231185 52231290 -93357998 + CT-rich Low_complexity Low_complexity 2 108 0 891 245 16 20 chr10 52233247 52233500 -93355788 - AluSp SINE Alu -60 253 2 2096 123 10 0 chr10 52233501 52233522 -93355766 - AluSp SINE Alu -9 304 285 315 0 0 0 chr10 52233522 52233557 -93355731 + (TG)n Simple_repeat Simple_repeat 2 36 0 2096 123 10 0 chr10 52233557 52233836 -93355452 - AluSp SINE Alu -28 285 1 1637 236 45 30 chr10 52233850 52234341 -93354947 + L1MC4a LINE L1 7160 7657 -151 22 56 0 0 chr10 52234346 52234382 -93354906 + AT_rich Low_complexity Low_complexity 1 36 0 326 284 42 0 chr10 52234454 52234549 -93354739 + L1MD3 LINE L1 7840 7938 -57 219 69 0 0 chr10 52235180 52235209 -93354079 + (TCC)n Simple_repeat Simple_repeat 2 30 0 2024 136 0 0 chr10 52235276 52235563 -93353725 + AluSq SINE Alu 1 287 -26 1052 259 160 7 chr10 52235617 52236068 -93353220 + LTR33 LTR ERVL 1 520 -1 2807 68 12 0 chr10 52236314 52236654 -93352634 + LTR14A LTR ERVK 1 344 0 1593 142 139 36 chr10 52237907 52237939 -93351349 - MLT1A1 LTR MaLR 0 365 338 2260 116 0 0 chr10 52237939 52238242 -93351046 + AluSx SINE Alu 1 303 -9 1593 142 139 36 chr10 52238242 52238540 -93350748 - MLT1A1 LTR MaLR -27 338 1 285 280 59 17 chr10 52238758 52238876 -93350412 + L1P LINE L1 5305 5427 -729 1209 123 14 55 chr10 52239297 52239463 -93349825 - L1MA4A LINE L1 -4 6299 6143 2087 120 0 46 chr10 52239463 52239788 -93349500 - AluSx SINE Alu -2 310 1 1209 123 14 55 chr10 52239788 52239840 -93349448 - L1MA4A LINE L1 -160 6143 6090 2328 116 0 0 chr10 52240347 52240658 -93348630 - AluY SINE Alu 0 311 1 30 45 0 0 chr10 52240800 52240844 -93348444 + AT_rich Low_complexity Low_complexity 1 44 0 228 192 154 0 chr10 52241113 52241165 -93348123 + L1ME3A LINE L1 5532 5591 -571 2145 123 3 0 chr10 52242093 52242393 -93346895 + AluSp SINE Alu 1 301 -12 895 130 15 15 chr10 52242409 52242540 -93346748 + AluJo/FLAM SINE Alu 3 133 -169 1912 159 0 7 chr10 52242547 52242849 -93346439 - AluSq SINE Alu -13 300 1 453 228 40 40 chr10 52242849 52242998 -93346290 + LTR16C LTR ERVL 342 490 -1 693 243 24 36 chr10 52243003 52243254 -93346034 + L1ME3A LINE L1 5914 6161 -9 911 190 0 22 chr10 52243297 52243476 -93345812 - FRAM SINE Alu -1 175 1 2223 113 0 28 chr10 52243490 52243810 -93345478 - AluY SINE Alu 0 311 1 288 185 0 15 chr10 52244351 52244416 -93344872 + Charlie8 DNA MER1_type 99 162 -2255 1705 140 54 11 chr10 52245146 52245425 -93343863 + AluJb SINE Alu 1 291 -21 2248 111 7 0 chr10 52245522 52245829 -93343459 - AluSq SINE Alu -3 310 2 356 57 76 57 chr10 52245906 52246011 -93343277 + (CATTT)n Simple_repeat Simple_repeat 1 107 0 262 143 0 0 chr10 52246011 52246053 -93343235 - Alu SINE Alu -16 286 245 227 167 0 24 chr10 52246094 52246136 -93343152 - Alu SINE Alu -16 285 245 239 231 0 0 chr10 52246177 52246229 -93343059 - AluJ/monomer SINE Alu -6 294 243 297 51 0 0 chr10 52246274 52246313 -93342975 + (CATGT)n Simple_repeat Simple_repeat 5 43 0 266 125 0 0 chr10 52246313 52246353 -93342935 - Alu SINE Alu -17 284 245 243 75 38 75 chr10 52246367 52246447 -93342841 + (CATTT)n Simple_repeat Simple_repeat 1 77 0 257 150 0 0 chr10 52246447 52246487 -93342801 - Alu SINE Alu -16 285 246 186 103 0 0 chr10 52246521 52246550 -93342738 + (CATGT)n Simple_repeat Simple_repeat 5 33 0 440 82 33 0 chr10 52246552 52246613 -93342675 - AluSg/x SINE Alu -29 280 218 1880 89 0 4 chr10 52246613 52246850 -93342438 + AluSp SINE Alu 63 298 -15 354 326 40 30 chr10 52247019 52247244 -93342044 - L2 LINE L2 -261 3052 2773 2374 100 0 0 chr10 52247244 52247553 -93341735 + AluSc SINE Alu 1 309 0 1585 167 50 37 chr10 52247856 52248155 -93341133 + AluJo SINE Alu 1 303 -9 2407 93 3 3 chr10 52248346 52248659 -93340629 - AluSp SINE Alu 0 313 1 341 301 110 23 chr10 52249068 52249241 -93340047 + MIR SINE MIR 20 207 -55 272 225 0 0 chr10 52249311 52249391 -93339897 + HAL1 LINE L1 2271 2350 -157 1862 145 14 24 chr10 52249414 52249704 -93339584 + AluJo SINE Alu 6 292 -20 1035 78 8 0 chr10 52249712 52249841 -93339447 + AluSq/x SINE Alu 1 130 -182 2052 142 10 0 chr10 52250176 52250471 -93338817 + AluSx SINE Alu 1 298 -14 495 214 10 0 chr10 52250503 52250606 -93338682 - MLT2C1 LTR ERVL -281 116 13 1010 281 45 24 chr10 52250630 52251050 -93338238 + L1ME2 LINE L1 5726 6154 -10 862 246 49 4 chr10 52251054 52251298 -93337990 + L1MC4 LINE L1 6354 6608 -1434 309 51 0 0 chr10 52251298 52251337 -93337951 + (TG)n Simple_repeat Simple_repeat 2 40 0 3470 200 112 52 chr10 52251352 52252534 -93336754 + L1MC4 LINE L1 6771 8023 -19 361 150 0 0 chr10 52252534 52252594 -93336694 + L1MC4 LINE L1 7968 8027 -15 2273 103 0 7 chr10 52252627 52252937 -93336351 + AluSc SINE Alu 1 308 -1 829 225 125 41 chr10 52253281 52253516 -93335772 + L1M4 LINE L1 4317 4531 -1615 2012 61 4 0 chr10 52253516 52253761 -93335527 + AluSp SINE Alu 47 292 -21 829 225 125 41 chr10 52253761 52253942 -93335346 + L1M4 LINE L1 4531 4768 -1378 360 173 232 0 chr10 52253943 52254111 -93335177 + L1M4 LINE L1 5114 5320 -826 377 140 80 20 chr10 52254123 52254223 -93335065 + L1MA10 LINE L1 6228 6333 -1 259 196 0 0 chr10 52254228 52254274 -93335014 + L2 LINE L2 3137 3182 -90 1578 195 13 17 chr10 52254282 52254584 -93334704 + AluJo SINE Alu 1 301 -11 261 274 91 62 chr10 52254782 52254968 -93334320 + MIR SINE MIR 17 206 -56 2159 126 0 3 chr10 52257105 52257415 -93331873 - AluY SINE Alu -2 309 1 2410 61 7 10 chr10 52257586 52257882 -93331406 - AluY SINE Alu -16 295 1 6339 202 60 22 chr10 52258460 52260102 -93329186 + L1M4 LINE L1 5 1709 -4833 2267 102 0 0 chr10 52260730 52261024 -93328264 - AluSx SINE Alu -18 294 1 2471 68 3 0 chr10 52261273 52261568 -93327720 + AluSp SINE Alu 2 297 -16 252 0 0 0 chr10 52262863 52262891 -93326397 + (CA)n Simple_repeat Simple_repeat 1 28 0 304 318 164 0 chr10 52263383 52263493 -93325795 - L2 LINE L2 -8 3264 3137 200 382 42 37 chr10 52263813 52264004 -93325284 - L2 LINE L2 -570 2744 2553 396 0 0 0 chr10 52266605 52266649 -93322639 + (TG)n Simple_repeat Simple_repeat 2 45 0 598 236 169 10 chr10 52267120 52267315 -93321973 - MIR SINE MIR -34 228 3 452 321 84 57 chr10 52268276 52268681 -93320607 + L3 LINE CR1 1043 1458 -119 327 344 126 16 chr10 52269612 52269795 -93319493 + L3 LINE CR1 1305 1507 -70 393 22 0 0 chr10 52269978 52270024 -93319264 + (CA)n Simple_repeat Simple_repeat 2 47 0 374 218 20 20 chr10 52271530 52271631 -93317657 + HsTC2 DNA Tc2 4 104 -1794 344 287 72 49 chr10 52271632 52271897 -93317391 - L1MEd LINE L1 -5482 637 367 310 143 24 71 chr10 52271946 52272030 -93317258 + HsTC2 DNA Tc2 1819 1898 0 2167 102 0 7 chr10 52272535 52272830 -93316458 - AluSg1 SINE Alu -16 293 1 424 309 8 0 chr10 52273302 52273425 -93315863 - MIR SINE MIR -60 202 79 2364 74 0 3 chr10 52273720 52274019 -93315269 + AluY SINE Alu 1 298 -13 2102 116 34 0 chr10 52274806 52275099 -93314189 - AluSx SINE Alu -9 303 1 978 190 19 25 chr10 52275166 52275530 -93313758 - Tigger2 DNA MER2_type -10 2708 1 382 290 173 5 chr10 52275715 52275929 -93313359 + MIR SINE MIR 2 251 -11 1050 241 55 32 chr10 52277177 52277642 -93311646 - MER39 LTR ERV1 -25 682 21 2257 96 7 7 chr10 52278082 52278373 -93310915 + AluSp SINE Alu 1 291 -22 1496 152 0 0 chr10 52278739 52278969 -93310319 + MER30 DNA MER1_type 1 230 0 461 228 10 151 chr10 52278977 52279038 -93310250 - MER5B DNA MER1_type 0 178 110 2360 98 0 13 chr10 52279038 52279354 -93309934 + AluSx SINE Alu 1 312 0 461 228 10 151 chr10 52279354 52279498 -93309790 - MER5B DNA MER1_type -68 110 2 190 227 23 0 chr10 52279546 52279590 -93309698 - MER5A DNA MER1_type -80 109 65 2383 74 0 3 chr10 52280214 52280512 -93308776 - AluY SINE Alu -14 297 1 2433 85 0 7 chr10 52281053 52281359 -93307929 + AluSg SINE Alu 1 304 -6 793 303 41 5 chr10 52281823 52282044 -93307244 + MIR SINE MIR 15 243 -19 2269 90 0 0 chr10 52282190 52282479 -93306809 + AluSg SINE Alu 1 289 -21 3281 169 17 8 chr10 52282831 52283482 -93305806 + L1MB7 LINE L1 5482 6138 -46 1532 180 60 11 chr10 52283529 52283812 -93305476 + AluJo SINE Alu 1 297 -15 281 122 0 0 chr10 52283835 52283884 -93305404 + L1MB8 LINE L1 6130 6178 0 388 158 0 13 chr10 52284782 52284858 -93304430 + L1MB3 LINE L1 5799 5873 -310 2342 117 0 0 chr10 52286276 52286584 -93302704 + AluSx SINE Alu 1 308 -4 2184 82 14 7 chr10 52286761 52287055 -93302233 - AluY SINE Alu -15 296 1 301 296 43 17 chr10 52289283 52289398 -93299890 + L2 LINE L2 3169 3286 -27 287 213 75 0 chr10 52289412 52289492 -93299796 + HsTC2 DNA Tc2 3 88 -1810 753 265 5 5 chr10 52290596 52290781 -93298507 - MER58A DNA MER1_type 0 224 40 2293 117 0 0 chr10 52290783 52291083 -93298205 + AluSc SINE Alu 1 300 -9 5678 195 57 50 chr10 52291093 52291835 -93297453 + L1MB8 LINE L1 3631 4366 -1812 2235 129 0 0 chr10 52291835 52292137 -93297151 - AluSq SINE Alu -11 302 1 5678 195 57 50 chr10 52292137 52293089 -93296199 + L1MB8 LINE L1 4366 5360 -818 1833 169 3 3 chr10 52293089 52293379 -93295909 + AluJo SINE Alu 1 290 -22 5678 195 57 50 chr10 52293379 52294189 -93295099 + L1MB8 LINE L1 5360 6163 -15 2026 129 4 0 chr10 52294530 52294844 -93294444 - AluSx SINE Alu 0 315 1 708 119 0 0 chr10 52295311 52295420 -93293868 + (TA)n Simple_repeat Simple_repeat 1 109 0 315 258 157 13 chr10 52295451 52295610 -93293678 - L1MC/D LINE L1 -1991 5817 5636 374 265 174 37 chr10 52301002 52301323 -93287965 - L2 LINE L2 -3 3310 2946 304 286 169 36 chr10 52302576 52302824 -93286464 - L1MC4a LINE L1 -1910 5898 5618 870 210 10 40 chr10 52303986 52304186 -93285102 + MER58A DNA MER1_type 27 220 -4 340 241 23 23 chr10 52304291 52304378 -93284910 + MER3 DNA MER1_type 1 87 -122 2471 71 0 0 chr10 52304999 52305296 -93283992 - AluY SINE Alu -14 297 1 1636 183 20 20 chr10 52305627 52305927 -93283361 - AluJo SINE Alu -12 300 1 216 228 35 0 chr10 52305927 52305984 -93283304 + CT-rich Low_complexity Low_complexity 4 62 0 2328 139 53 31 chr10 52307217 52307408 -93281880 + MSTB LTR MaLR 1 186 -240 2082 106 0 7 chr10 52307408 52307715 -93281573 + AluSc SINE Alu 1 305 0 2328 139 53 31 chr10 52307715 52307939 -93281349 + MSTB LTR MaLR 186 426 0 254 254 15 0 chr10 52308035 52308102 -93281186 - L2 LINE L2 -1 3271 3204 2474 87 7 0 chr10 52308145 52308454 -93280834 + AluY SINE Alu 1 311 0 235 327 7 53 chr10 52308696 52308846 -93280442 - L2 LINE L2 -469 2845 2703 4751 159 57 23 chr10 52308846 52309748 -93279540 + L1MC1 LINE L1 5384 7764 -21 2252 115 0 0 chr10 52310117 52310413 -93278875 + AluSg SINE Alu 1 296 -14 6313 189 66 23 chr10 52310878 52311397 -93277891 + L1MB8 LINE L1 3616 4111 -2067 2179 95 11 0 chr10 52311397 52311681 -93277607 + AluSx SINE Alu 5 291 -21 6313 189 66 23 chr10 52311681 52313609 -93275679 + L1MB8 LINE L1 4111 6168 -10 2057 149 0 7 chr10 52313609 52313911 -93275377 - AluSx SINE Alu -12 300 1 209 251 186 92 chr10 52314074 52314401 -93274887 + L2 LINE L2 2926 3283 -30 739 246 5 21 chr10 52314444 52314631 -93274657 + MER20 DNA MER1_type 36 219 0 1353 210 16 0 chr10 52314669 52314926 -93274362 + AluJo SINE Alu 1 261 -51 934 291 71 6 chr10 52314926 52315266 -93274022 + LTR16B LTR ERVL 103 464 0 259 337 20 0 chr10 52315308 52315406 -93273882 + MIR3 SINE MIR 88 187 -21 220 255 40 105 chr10 52315766 52315966 -93273322 - MIR SINE MIR -3 259 73 2502 236 46 14 chr10 52316011 52316647 -93272641 - L1ME1 LINE L1 -5 6161 5506 343 288 8 17 chr10 52317332 52317450 -93271838 - MIR3 SINE MIR -42 166 50 436 284 31 25 chr10 52317450 52317612 -93271676 + L2 LINE L2 3144 3306 -7 2118 145 0 0 chr10 52317612 52317963 -93271325 + AluSx SINE Alu 1 351 0 670 302 168 4 chr10 52317973 52318432 -93270856 - L1MC/D LINE L1 -720 5577 5294 2275 125 0 0 chr10 52318481 52318786 -93270502 - AluSx SINE Alu -7 305 1 323 280 43 109 chr10 52319186 52319304 -93269984 - HAL1 LINE L1 -761 1746 1622 2033 134 3 10 chr10 52319304 52319602 -93269686 + AluJb SINE Alu 1 296 -16 323 280 43 109 chr10 52319602 52319833 -93269455 - HAL1 LINE L1 -885 1622 1420 * 344 304 74 27 chr10 52319829 52320165 -93269123 - L1MEd LINE L1 -4902 1217 866 2411 98 0 0 chr10 52321420 52321726 -93267562 - AluSc SINE Alu -3 306 1 2160 119 0 28 chr10 52321947 52322267 -93267021 + AluY SINE Alu 1 311 0 911 190 0 22 chr10 52322281 52322460 -93266828 + FRAM SINE Alu 1 175 -1 776 243 24 36 chr10 52322503 52322754 -93266534 - L1ME3A LINE L1 -9 6161 5914 461 228 40 40 chr10 52322759 52322908 -93266380 - LTR16C LTR ERVL -1 490 342 1918 156 0 10 chr10 52322908 52323210 -93266078 + AluSx SINE Alu 1 299 -13 843 130 15 15 chr10 52323217 52323348 -93265940 - FLAM_C SINE Alu 0 133 3 2153 123 3 0 chr10 52323364 52323664 -93265624 - AluSp SINE Alu -12 301 1 235 248 88 53 chr10 52324468 52324644 -93264644 - L1ME3A LINE L1 -571 5591 5532 30 45 0 0 chr10 52324913 52324957 -93264331 + AT_rich Low_complexity Low_complexity 1 44 0 2345 116 0 0 chr10 52325099 52325410 -93263878 + AluY SINE Alu 1 311 0 1158 123 14 55 chr10 52325917 52325969 -93263319 + L1MA4A LINE L1 6090 6143 -160 2105 120 0 46 chr10 52325969 52326294 -93262994 + AluSx SINE Alu 1 310 -2 1158 123 14 55 chr10 52326294 52326460 -93262828 + L1MA4A LINE L1 6143 6299 -4 280 280 59 17 chr10 52326881 52326999 -93262289 - L1P LINE L1 -729 5427 5305 1484 148 136 33 chr10 52327217 52327515 -93261773 + MLT1A1 LTR MaLR 1 338 -27 2285 116 0 0 chr10 52327515 52327818 -93261470 - AluSx SINE Alu -9 303 1 1484 148 136 33 chr10 52327818 52327850 -93261438 + MLT1A1 LTR MaLR 338 365 0 5536 193 91 31 chr10 52329097 52330588 -93258700 - L1MDa LINE L1 -4156 2384 805 484 230 72 7 chr10 52330588 52330727 -93258561 - L1MDa LINE L1 -6353 187 40 231 303 25 57 chr10 52331497 52331619 -93257669 - L2 LINE L2 0 3272 3155 2119 124 0 0 chr10 52332106 52332427 -93256861 + AluY SINE Alu 1 321 0 422 21 0 0 chr10 52332665 52332713 -93256575 + (TA)n Simple_repeat Simple_repeat 2 49 0 2205 116 10 0 chr10 52332713 52333005 -93256283 - AluSx SINE Alu -4 308 14 258 247 74 0 chr10 52333013 52333094 -93256194 + L1MC5 LINE L1 7843 7929 -32 471 81 0 0 chr10 52333101 52333163 -93256125 + Alu SINE Alu 2 63 -255 25 0 0 0 chr10 52333505 52333530 -93255758 + AT_rich Low_complexity Low_complexity 1 25 0 229 241 0 0 chr10 52333594 52333648 -93255640 - L1ME LINE L1 -311 5810 5757 994 126 0 0 chr10 52333891 52334026 -93255262 + AluSq/x SINE Alu 2 136 -176 2287 205 47 4 chr10 52334026 52334591 -93254697 - L1ME LINE L1 -365 5799 5211 1706 155 22 51 chr10 52334598 52334778 -93254510 - AluJb SINE Alu -5 307 138 2300 84 0 16 chr10 52334778 52335086 -93254202 - AluY SINE Alu -8 303 1 1706 155 22 51 chr10 52335086 52335221 -93254067 - AluJb SINE Alu -174 138 1 230 266 77 70 chr10 52335516 52335659 -93253629 + LTR59 LTR ERV1 334 477 -120 207 0 0 0 chr10 52336510 52336533 -93252755 + (T)n Simple_repeat Simple_repeat 1 23 0 231 342 0 0 chr10 52336574 52336650 -93252638 - L1ME LINE L1 -339 5823 5748 * 424 158 0 13 chr10 52336649 52336725 -93252563 - L1MB3 LINE L1 -310 5873 5799 290 143 0 0 chr10 52337623 52337672 -93251616 - L1MB8 LINE L1 0 6178 6130 1706 172 14 10 chr10 52337695 52337991 -93251297 - AluJo SINE Alu -15 297 1 3610 171 17 3 chr10 52338038 52338688 -93250600 - L1MB7 LINE L1 -44 6140 5482 2416 83 0 0 chr10 52339040 52339341 -93249947 - AluSg SINE Alu -9 301 1 718 294 41 5 chr10 52339482 52339703 -93249585 - MIR SINE MIR -19 243 15 2412 83 0 7 chr10 52340167 52340467 -93248821 - AluSg SINE Alu -12 298 1 2409 77 0 3 chr10 52341008 52341307 -93247981 + AluY SINE Alu 1 298 -13 192 204 23 0 chr10 52341929 52341973 -93247315 + MER5A DNA MER1_type 65 109 -80 371 222 11 157 chr10 52342043 52342170 -93247118 + MER5B DNA MER1_type 17 110 -68 2385 95 0 13 chr10 52342170 52342485 -93246803 - AluSx SINE Alu -1 311 1 371 222 11 157 chr10 52342485 52342542 -93246746 + MER5B DNA MER1_type 110 174 -4 1539 152 0 0 chr10 52342554 52342784 -93246504 - MER30 DNA MER1_type 0 230 1 2255 100 7 7 chr10 52343150 52343441 -93245847 - AluSp SINE Alu -22 291 1 1238 251 77 32 chr10 52343870 52344360 -93244928 + MER39 LTR ERV1 11 563 -2 323 272 193 15 chr10 52345594 52345796 -93243492 - MIR SINE MIR -11 251 14 1041 194 19 25 chr10 52345993 52346357 -93242931 + Tigger2 DNA MER2_type 1 2708 -10 2106 116 34 0 chr10 52346424 52346716 -93242572 + AluSx SINE Alu 1 302 -10 2418 74 0 3 chr10 52347503 52347802 -93241486 - AluY SINE Alu -13 298 1 22 56 0 0 chr10 52347812 52347848 -93241440 + AT_rich Low_complexity Low_complexity 1 36 0 1625 158 60 18 chr10 52347935 52348219 -93241069 + AluSq SINE Alu 6 301 -12 21 0 0 0 chr10 52348402 52348423 -93240865 + AT_rich Low_complexity Low_complexity 1 21 0 628 259 120 30 chr10 52348936 52349414 -93239874 + MLT1H1 LTR MaLR 3 542 -7 307 194 101 101 chr10 52349466 52349605 -93239683 - L2 LINE L2 -10 3303 3165 2108 138 3 0 chr10 52350584 52350888 -93238400 - AluSx SINE Alu -7 305 1 1429 127 38 0 chr10 52351616 52351828 -93237460 + AluJb SINE Alu 91 310 -2 399 278 101 23 chr10 52351828 52352465 -93236823 + L1MD3 LINE L1 7010 7777 -218 1302 105 64 41 chr10 52352491 52352710 -93236578 + MER1B DNA MER1_type 1 224 -73 240 129 0 0 chr10 52352699 52352730 -93236558 + MER1B DNA MER1_type 309 339 0 * 396 259 67 108 chr10 52352821 52353192 -93236096 + L1MC4 LINE L1 7685 8040 -2 333 313 122 0 chr10 52354055 52354186 -93235102 - L1MC/D LINE L1 -1983 5825 5679 348 186 0 0 chr10 52354681 52354740 -93234548 + MER5A DNA MER1_type 51 109 -80 338 361 50 36 chr10 52354841 52355257 -93234031 + L3 LINE CR1 1132 1553 -24 228 67 0 0 chr10 52355348 52355378 -93233910 + (CAT)n Simple_repeat Simple_repeat 3 32 0 195 42 0 0 chr10 52356576 52356600 -93232688 + (A)n Simple_repeat Simple_repeat 1 24 0 778 131 7 58 chr10 52356641 52356778 -93232510 + AluSq/x SINE Alu 4 133 -179 2083 124 0 3 chr10 52358440 52358730 -93230558 - AluSg SINE Alu -21 289 1 362 79 16 0 chr10 52360526 52360589 -93228699 + (TA)n Simple_repeat Simple_repeat 2 65 0 2133 116 0 3 chr10 52360589 52360883 -93228405 - AluSx SINE Alu -19 293 1 2211 89 0 68 chr10 52360971 52361295 -93227993 - AluSq SINE Alu -11 302 1 22 0 0 0 chr10 52361650 52361672 -93227616 + AT_rich Low_complexity Low_complexity 1 22 0 199 75 132 57 chr10 52361692 52361745 -93227543 - MIR SINE MIR -32 230 174 2317 116 0 0 chr10 52361836 52362147 -93227141 + AluSx SINE Alu 1 311 -1 1803 153 27 7 chr10 52362541 52362835 -93226453 + AluSx SINE Alu 1 300 -12 2305 96 0 10 chr10 52362982 52363275 -93226013 + AluSq SINE Alu 1 290 -23 4035 11 0 0 chr10 52364207 52364655 -93224633 + L1PA2 LINE L1 5707 6154 -1 267 270 0 0 chr10 52365750 52365824 -93223464 + L1MC4 LINE L1 7246 7319 -723 * 1600 206 58 83 chr10 52365820 52366124 -93223164 + L1MC4 LINE L1 7537 7847 -195 1912 110 0 0 chr10 52366124 52366378 -93222910 + AluSq SINE Alu 58 311 -2 2448 97 0 0 chr10 52366379 52366689 -93222599 + AluSg SINE Alu 1 310 0 1600 206 58 83 chr10 52366689 52366901 -93222387 + L1MC4 LINE L1 7846 8042 0 2248 114 3 7 chr10 52367249 52367555 -93221733 + AluSq SINE Alu 1 305 -8 25 31 0 0 chr10 52367773 52367805 -93221483 + AT_rich Low_complexity Low_complexity 1 32 0 2052 130 0 3 chr10 52367810 52368118 -93221170 + AluSq SINE Alu 1 307 0 2164 111 17 7 chr10 52368330 52368627 -93220661 + AluSq SINE Alu 1 300 -13 2349 85 3 0 chr10 52369178 52369471 -93219817 + AluSx SINE Alu 1 294 -18 332 152 13 89 chr10 52369653 52369732 -93219556 + L1MC/D LINE L1 5682 5754 -605 195 346 77 39 chr10 52369892 52370022 -93219266 + L2 LINE L2 3122 3256 -16 201 291 18 0 chr10 52370501 52370556 -93218732 + MIR SINE MIR 25 80 -182 2250 104 0 25 chr10 52371420 52371736 -93217552 + AluSx SINE Alu 2 309 -3 369 200 14 0 chr10 52372091 52372161 -93217127 + MER58 DNA MER1_type 2349 2419 -1 180 0 0 0 chr10 52372637 52372657 -93216631 + (A)n Simple_repeat Simple_repeat 1 20 0 1902 168 0 0 chr10 52373147 52373439 -93215849 + AluJb SINE Alu 1 292 -20 599 180 16 16 chr10 52373496 52373618 -93215670 + L1MB7 LINE L1 6044 6165 -19 1976 122 0 69 chr10 52373810 52373990 -93215298 - AluSx SINE Alu -14 298 148 2533 71 10 7 chr10 52373990 52374300 -93214988 - AluY SINE Alu 0 311 1 1976 122 0 69 chr10 52374300 52374439 -93214849 - AluSx SINE Alu -164 148 1 190 0 67 0 chr10 52374447 52374477 -93214811 + (TTTA)n Simple_repeat Simple_repeat 4 35 0 266 224 13 26 chr10 52374673 52374749 -93214539 + L1ME LINE L1 5603 5677 -444 1910 129 0 78 chr10 52374871 52375203 -93214085 + AluSq SINE Alu 2 307 -6 1098 151 15 34 chr10 52375502 52375707 -93213581 + AluJo SINE Alu 104 304 -8 243 0 0 0 chr10 52376039 52376066 -93213222 + (CA)n Simple_repeat Simple_repeat 2 28 0 189 0 0 0 chr10 52376169 52376190 -93213098 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 2208 70 21 7 chr10 52376194 52376478 -93212810 - AluY SINE Alu -23 288 1 786 126 94 0 chr10 52377675 52377802 -93211486 - MER85 DNA T2_type 0 139 1 2481 76 0 7 chr10 52378331 52378632 -93210656 + AluY SINE Alu 2 300 -11 1565 123 3 126 chr10 52378864 52379205 -93210083 + AluSx SINE Alu 1 299 -3 2482 64 0 0 chr10 52379509 52379804 -93209484 + AluY SINE Alu 2 296 -15 2519 60 0 7 chr10 52380065 52380364 -93208924 - AluSp SINE Alu -16 297 1 2281 76 24 3 chr10 52381682 52381970 -93207318 - AluSg SINE Alu -16 294 1 1427 157 36 36 chr10 52382100 52382380 -93206908 + AluJo SINE Alu 3 282 -30 264 271 179 14 chr10 52383903 52384043 -93205245 + MIR SINE MIR 82 244 -18 2368 52 28 7 chr10 52384818 52385131 -93204157 - AluY SINE Alu 0 311 1 514 249 133 6 chr10 52385753 52385934 -93203354 - MIR SINE MIR 0 262 59 1333 170 97 8 chr10 52385996 52386255 -93203033 + AluJb SINE Alu 6 287 -25 228 182 0 0 chr10 52386333 52386377 -93202911 + (CA)n Simple_repeat Simple_repeat 2 45 0 1985 163 0 0 chr10 52386567 52386873 -93202415 - AluSx SINE Alu -6 306 1 199 75 132 57 chr10 52386963 52387016 -93202272 + MIR SINE MIR 174 230 -32 1970 139 26 0 chr10 52387404 52387707 -93201581 + AluSq SINE Alu 1 311 -2 2155 114 3 3 chr10 52389574 52389872 -93199416 + AluSg SINE Alu 1 298 -12 741 136 7 79 chr10 52391528 52391668 -93197620 - AluSq/x SINE Alu -179 133 4 207 100 0 0 chr10 52392896 52392926 -93196362 + (ATG)n Simple_repeat Simple_repeat 3 32 0 291 334 75 44 chr10 52393030 52393458 -93195830 - L3 LINE CR1 -39 1538 1098 348 186 0 0 chr10 52393546 52393605 -93195683 - MER5A DNA MER1_type -80 109 51 2390 85 7 0 chr10 52394443 52394748 -93194540 - AluSx SINE Alu -5 307 1 423 260 58 110 chr10 52395379 52395744 -93193544 - L1MC4 LINE L1 -2 8040 7695 201 394 0 0 chr10 52395901 52396028 -93193260 + G-rich Low_complexity Low_complexity 1 127 0 1470 152 0 34 chr10 52396158 52396421 -93192867 + AluY SINE Alu 41 294 -17 1314 95 0 0 chr10 52396421 52396589 -93192699 + AluY SINE Alu 133 300 -11 663 229 8 8 chr10 52397119 52397250 -93192038 + FLAM_A SINE Alu 1 131 -2 1530 168 4 32 chr10 52397272 52397552 -93191736 + AluJo SINE Alu 16 287 -25 376 327 205 23 chr10 52397712 52398097 -93191191 - L2 LINE L2 -5 3308 2854 468 183 54 0 chr10 52398105 52398198 -93191090 + LTR47A LTR ERVL 5 102 -350 2277 106 0 0 chr10 52398209 52398511 -93190777 - AluSx SINE Alu -10 302 1 1339 158 28 28 chr10 52398512 52398759 -93190529 + LTR47A LTR ERVL 206 452 0 3204 156 21 57 chr10 52398759 52399369 -93189919 + L1MB2 LINE L1 5582 6169 -2 2155 106 10 17 chr10 52399383 52399684 -93189604 - AluSx SINE Alu -13 299 1 2331 95 3 13 chr10 52399704 52400019 -93189269 - AluSp SINE Alu -1 312 1 2240 109 7 0 chr10 52400019 52400322 -93188966 - AluSp SINE Alu -8 305 1 1199 244 128 67 chr10 52400697 52401197 -93188091 + MER39 LTR ERV1 3 563 -2 380 271 182 14 chr10 52402444 52402658 -93186630 - MIR SINE MIR -11 251 2 1011 206 19 22 chr10 52402843 52403206 -93186082 + Tigger2 DNA MER2_type 1 2708 -10 2094 127 33 0 chr10 52403273 52403572 -93185716 + AluSx SINE Alu 1 309 -3 2489 68 0 3 chr10 52404361 52404671 -93184617 - AluY SINE Alu -2 309 1 24 32 0 0 chr10 52404681 52404712 -93184576 + AT_rich Low_complexity Low_complexity 1 31 0 2211 125 3 0 chr10 52404800 52405112 -93184176 + AluSq SINE Alu 1 313 0 646 243 121 27 chr10 52405853 52406299 -93182989 + MLT1H1 LTR MaLR 35 542 -7 389 223 178 88 chr10 52406351 52406705 -93182583 - L2 LINE L2 -10 3303 2918 2174 128 3 0 chr10 52407470 52407774 -93181514 - AluSx SINE Alu -7 305 1 1440 146 0 5 chr10 52408484 52408697 -93180591 + AluJb SINE Alu 88 299 -13 1006 283 95 24 chr10 52408701 52409324 -93179964 + L1MC4 LINE L1 7008 7674 -368 1258 111 53 0 chr10 52409373 52409562 -93179726 + MER1B DNA MER1_type 1 199 -98 242 94 0 0 chr10 52409580 52409612 -93179676 + MER1B DNA MER1_type 308 339 0 423 260 58 110 chr10 52409709 52410074 -93179214 + L1MC4 LINE L1 7695 8040 -2 2308 84 7 0 chr10 52410705 52411001 -93178287 + AluSx SINE Alu 1 298 -14 763 218 48 32 chr10 52411001 52411189 -93178099 - MER58A DNA MER1_type -27 197 7 332 296 26 65 chr10 52411192 52411227 -93178061 + L1 LINE L1 4981 5016 -1130 2238 113 0 0 chr10 52411227 52411529 -93177759 + AluSg SINE Alu 1 302 -8 332 296 26 65 chr10 52411529 52411723 -93177565 + L1 LINE L1 5016 5201 -945 371 230 9 70 chr10 52411800 52411829 -93177459 + L1M4 LINE L1 4251 4280 -1866 2324 78 27 0 chr10 52411829 52412123 -93177165 + AluSp SINE Alu 1 302 -11 371 230 9 70 chr10 52412123 52412229 -93177059 + L1M4 LINE L1 4280 4377 -1769 305 111 37 0 chr10 52412229 52412283 -93177005 + AluSp/q SINE Alu 248 303 0 1905 153 23 72 chr10 52412336 52412503 -93176785 + THE1C LTR MaLR 1 175 -200 180 0 0 0 chr10 52412503 52412523 -93176765 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 2000 139 0 0 chr10 52412526 52412806 -93176482 - AluSx SINE Alu -32 280 1 1905 153 23 72 chr10 52412806 52413025 -93176263 + THE1C LTR MaLR 177 372 -3 426 288 152 16 chr10 52413058 52413242 -93176046 + MIR SINE MIR 35 243 -19 305 300 39 138 chr10 52413803 52414319 -93174969 - L1M2 LINE L1 -5733 1116 652 2267 100 0 16 chr10 52415791 52416101 -93173187 + AluSx SINE Alu 1 305 -7 704 179 7 64 chr10 52417017 52417157 -93172131 - FLAM_A SINE Alu -1 132 1 1899 201 50 22 chr10 52418172 52418393 -93170895 - MSTB LTR MaLR -12 414 176 2226 127 0 0 chr10 52418393 52418692 -93170596 - AluSx SINE Alu -13 299 1 1899 201 50 22 chr10 52418692 52418873 -93170415 - MSTB LTR MaLR -250 176 1 1941 151 0 10 chr10 52419164 52419463 -93169825 + AluY SINE Alu 1 296 -15 24 53 0 0 chr10 52419872 52419910 -93169378 + AT_rich Low_complexity Low_complexity 1 38 0 2243 114 3 0 chr10 52420304 52420601 -93168687 + AluSx SINE Alu 1 298 -14 364 181 56 0 chr10 52420769 52420841 -93168447 - HAL1 LINE L1 -335 2172 2097 264 377 14 0 chr10 52421161 52421373 -93167915 - HAL1 LINE L1 -597 1910 1696 271 280 109 23 chr10 52421440 52421615 -93167673 - HAL1 LINE L1 -951 1556 1367 238 261 33 85 chr10 52421634 52421941 -93167347 - HAL1 LINE L1 -1214 1293 1003 240 323 196 33 chr10 52422031 52422663 -93166625 - HAL1 LINE L1 -1765 742 8 1268 149 9 28 chr10 52422915 52423130 -93166158 + AluJo SINE Alu 87 297 -15 3555 205 26 7 chr10 52423242 52423253 -93166035 - L1 LINE L1 -852 5294 5285 2962 104 9 29 chr10 52423253 52423704 -93165584 - L1PB1 LINE L1 -1 6150 5709 3555 205 26 7 chr10 52423704 52424513 -93164775 - L1 LINE L1 -861 5285 4459 3444 188 0 30 chr10 52424514 52424539 -93164749 + L1 LINE L1 3762 3786 -2360 2301 91 0 7 chr10 52424539 52424836 -93164452 + AluSg SINE Alu 1 295 -15 3444 188 0 30 chr10 52424836 52425532 -93163756 + L1 LINE L1 3786 4461 -1685 2408 67 0 3 chr10 52426632 52426931 -93162357 + AluY SINE Alu 1 298 -13 2473 78 0 0 chr10 52427006 52427315 -93161973 - AluY SINE Alu -1 310 2 1506 197 69 10 chr10 52428757 52429062 -93160226 + MLT1A1 LTR MaLR 43 365 0 422 347 55 5 chr10 52429065 52429264 -93160024 - L2 LINE L2 -541 2773 2565 1226 165 83 109 chr10 52429287 52429645 -93159643 + MLT1B LTR MaLR 3 350 -40 932 292 124 32 chr10 52429645 52429960 -93159328 + MER2 DNA MER2_type 1 344 -1 4217 209 38 108 chr10 52429993 52431456 -93157832 + MLT1A2-int LTR MaLR 1 1361 -10 1313 188 68 119 chr10 52431465 52431859 -93157429 + MLT1A2 LTR MaLR 1 374 0 346 219 0 0 chr10 52432312 52432376 -93156912 + MER113 DNA MER1_type? 455 518 -3 2307 109 7 0 chr10 52432433 52432735 -93156553 + AluSc SINE Alu 1 304 -5 2172 122 3 0 chr10 52433032 52433328 -93155960 + AluSx SINE Alu 1 297 -15 185 306 141 24 chr10 52433354 52433439 -93155849 - L2 LINE L2 -4 3268 3174 40 83 0 0 chr10 52434288 52434384 -93154904 + AT_rich Low_complexity Low_complexity 1 96 0 186 209 0 0 chr10 52434757 52434800 -93154488 + A-rich Low_complexity Low_complexity 1 43 0 2090 103 51 0 chr10 52435580 52435872 -93153416 + AluSc SINE Alu 1 307 -2 1397 189 4 4 chr10 52436121 52436359 -93152929 + AluJo SINE Alu 9 246 -66 198 0 0 0 chr10 52436359 52436381 -93152907 + (A)n Simple_repeat Simple_repeat 1 22 0 37 52 0 0 chr10 52436527 52436585 -93152703 + AT_rich Low_complexity Low_complexity 1 58 0 1991 117 10 24 chr10 52437813 52438111 -93151177 - AluSg SINE Alu -16 294 1 2051 122 10 14 chr10 52438969 52439263 -93150025 + AluSx SINE Alu 1 293 -19 2318 71 0 0 chr10 52440228 52440537 -93148751 + AluY SINE Alu 1 309 0 204 308 192 8 chr10 52440609 52440729 -93148559 - L2 LINE L2 -1304 2010 1869 1714 222 39 3 chr10 52440892 52441279 -93148009 + L1MB3 LINE L1 4748 5148 -998 3887 144 48 85 chr10 52441697 52442583 -93146705 + L1MB3 LINE L1 5328 6181 -2 642 226 0 0 chr10 52443625 52443740 -93145548 + AluJb SINE Alu 132 246 -66 1662 128 0 0 chr10 52443744 52443970 -93145318 + AluJb SINE Alu 71 296 -16 2544 56 0 7 chr10 52443970 52444274 -93145014 + AluY SINE Alu 1 302 -9 558 163 0 0 chr10 52444392 52444472 -93144816 + FRAM/FAM SINE Alu 4 83 -93 2406 200 37 20 chr10 52446278 52446824 -93142464 + MER68 LTR ERV1 6 560 -2 1898 126 61 0 chr10 52447111 52447388 -93141900 - AluSq SINE Alu -19 294 1 267 133 0 0 chr10 52447676 52447721 -93141567 + (A)n Simple_repeat Simple_repeat 1 45 0 1759 143 57 0 chr10 52447868 52448133 -93141155 - AluJb SINE Alu -24 288 9 2463 79 0 0 chr10 52448453 52448757 -93140531 + AluY SINE Alu 1 304 -7 8492 193 104 27 chr10 52448874 52450039 -93139249 + Cheshire DNA MER1_type 2 1076 -1344 1773 152 48 0 chr10 52450039 52450328 -93138960 - AluJb SINE Alu -5 307 5 8492 193 104 27 chr10 52450328 52451409 -93137879 + Cheshire DNA MER1_type 1076 2420 0 260 323 8 69 chr10 52451602 52451732 -93137556 - L2 LINE L2 -241 3031 2910 263 265 15 15 chr10 52451994 52452062 -93137226 - L3 LINE CR1 -241 1336 1269 914 244 104 9 chr10 52452073 52452471 -93136817 + MLT1E LTR MaLR 8 518 -75 21 0 0 0 chr10 52452489 52452510 -93136778 + AT_rich Low_complexity Low_complexity 1 21 0 181 343 136 59 chr10 52452543 52452829 -93136459 + L2 LINE L2 2959 3266 -6 195 296 34 3 chr10 52452956 52453030 -93136258 - MIR SINE MIR -35 173 94 1393 60 0 18 chr10 52454051 52454219 -93135069 + AluSc SINE Alu 1 165 -144 505 178 0 0 chr10 52455163 52455253 -93134035 - AluSg/x SINE Alu -4 306 217 1302 122 80 0 chr10 52455253 52455441 -93133847 - AluSg/x SINE Alu -44 268 66 1143 93 0 0 chr10 52455449 52455600 -93133688 + AluSg/x SINE Alu 156 306 -6 317 222 244 34 chr10 52456371 52456547 -93132741 + L2 LINE L2 3099 3311 -2 382 271 26 94 chr10 52457322 52457514 -93131774 - MIR3 SINE MIR -27 181 3 182 225 70 42 chr10 52458259 52458330 -93130958 - L3 LINE CR1 -2 1575 1503 5025 136 29 8 chr10 52458408 52459394 -93129894 + L1PA16 LINE L1 5162 6166 0 2375 86 0 0 chr10 52459403 52459695 -93129593 + AluSc SINE Alu 1 292 -17 5206 189 18 27 chr10 52459738 52461014 -93128274 + L1 LINE L1 2304 3590 -2556 2289 71 11 0 chr10 52461014 52461296 -93127992 + AluY SINE Alu 1 285 -26 285 29 0 0 chr10 52461296 52461330 -93127958 + (GAGAA)n Simple_repeat Simple_repeat 4 37 0 5206 189 18 27 chr10 52461330 52461382 -93127906 + L1 LINE L1 3588 3621 -2525 770 110 55 0 chr10 52461382 52461491 -93127797 + AluSg SINE Alu 1 115 -195 624 160 0 0 chr10 52461489 52461595 -93127693 + AluJb SINE Alu 206 311 -1 * 232 146 0 0 chr10 52461682 52461723 -93127565 + L1ME1 LINE L1 5329 5369 -2416 1429 200 35 35 chr10 52461734 52462079 -93127209 + MLT1A1 LTR MaLR 10 354 -11 1711 148 4 8 chr10 52462079 52462342 -93126946 - AluJo SINE Alu -12 300 39 2891 225 26 32 chr10 52462357 52463122 -93126166 + L1ME1 LINE L1 5361 6122 -44 1707 212 80 16 chr10 52463122 52463561 -93125727 + MLT1C LTR MaLR 1 467 0 2891 225 26 32 chr10 52463561 52463604 -93125684 + L1ME1 LINE L1 6122 6164 -2 26 30 0 0 chr10 52463743 52463776 -93125512 + AT_rich Low_complexity Low_complexity 1 33 0 949 282 17 0 chr10 52463912 52464199 -93125089 + L1MCb LINE L1 1 292 -5753 3043 191 53 57 chr10 52464204 52464960 -93124328 + L1MCb LINE L1 521 1278 -5286 2184 59 55 3 chr10 52464960 52465250 -93124038 + AluY SINE Alu 1 305 -6 3043 191 53 57 chr10 52465250 52465270 -93124018 + L1MCb LINE L1 1278 1297 -5267 698 229 0 0 chr10 52465270 52465401 -93123887 + FLAM_A SINE Alu 1 131 -2 3043 191 53 57 chr10 52465401 52466141 -93123147 + L1MCb LINE L1 1297 2031 -4533 416 138 0 0 chr10 52466141 52466206 -93123082 + AluJ/FLAM SINE Alu 1 65 -247 630 183 196 7 chr10 52466209 52466362 -93122926 - MIR SINE MIR -48 214 33 2185 116 3 0 chr10 52466724 52467027 -93122261 + AluY SINE Alu 1 304 -7 1987 120 9 47 chr10 52468936 52469253 -93120035 + AluSg SINE Alu 1 305 -5 311 256 0 13 chr10 52470046 52470124 -93119164 + Charlie1a DNA MER1_type 1 77 -1378 2335 105 0 0 chr10 52470125 52470429 -93118859 - AluSq SINE Alu -9 304 1 2052 233 184 21 chr10 52470497 52470857 -93118431 + Charlie1a DNA MER1_type 88 388 -2373 1201 179 101 30 chr10 52470857 52471125 -93118163 + AluJo SINE Alu 1 287 -25 2052 233 184 21 chr10 52471125 52471602 -93117686 + Charlie1a DNA MER1_type 388 786 -1975 2184 115 3 0 chr10 52471602 52471897 -93117391 - AluSx SINE Alu -12 300 5 2052 233 184 21 chr10 52471897 52471911 -93117377 + Charlie1a DNA MER1_type 786 796 -1965 2042 137 0 0 chr10 52471911 52472210 -93117078 - AluY SINE Alu -12 299 1 2052 233 184 21 chr10 52472210 52472376 -93116912 + Charlie1a DNA MER1_type 796 1274 -181 701 244 6 0 chr10 52472392 52472548 -93116740 + MER20 DNA MER1_type 60 216 -3 645 277 0 0 chr10 52473159 52473318 -93115970 - FRAM SINE Alu -6 160 2 1226 81 0 0 chr10 52473348 52473497 -93115791 - AluSp SINE Alu -35 278 130 329 186 100 102 chr10 52473646 52473812 -93115476 - MIR3 SINE MIR -1 207 45 624 246 46 29 chr10 52473812 52473987 -93115301 - MER5B DNA MER1_type 0 178 1 2346 80 0 3 chr10 52475825 52476126 -93113162 + AluY SINE Alu 2 301 -10 2326 120 0 0 chr10 52476294 52476602 -93112686 - AluSx SINE Alu -4 308 1 207 0 0 0 chr10 52477891 52477914 -93111374 + (T)n Simple_repeat Simple_repeat 1 23 0 388 158 0 13 chr10 52478030 52478106 -93111182 - L1MB3 LINE L1 -310 5873 5799 268 143 0 0 chr10 52479004 52479053 -93110235 - L1MB8 LINE L1 0 6178 6130 1718 172 14 10 chr10 52479076 52479372 -93109916 - AluJo SINE Alu -15 297 1 3323 170 17 3 chr10 52479421 52480069 -93109219 - L1MB7 LINE L1 -46 6138 5482 2390 83 0 0 chr10 52480421 52480722 -93108566 - AluSg SINE Alu -9 301 1 794 294 41 5 chr10 52480863 52481084 -93108204 - MIR SINE MIR -19 243 15 559 92 8 76 chr10 52481726 52481845 -93107443 + AluSp/q SINE Alu 197 307 -6 22 0 0 0 chr10 52481899 52481921 -93107367 + AT_rich Low_complexity Low_complexity 1 22 0 2543 53 0 3 chr10 52482128 52482430 -93106858 - AluY SINE Alu -10 301 1 237 178 0 0 chr10 52482441 52482486 -93106802 + (TATATG)n Simple_repeat Simple_repeat 4 48 0 576 266 119 23 chr10 52482816 52483034 -93106254 + MIR SINE MIR 12 250 -12 259 250 171 14 chr10 52483580 52483720 -93105568 - L2 LINE L2 -5 3308 3147 2232 92 7 7 chr10 52483966 52484258 -93105030 + AluSc SINE Alu 1 292 -17 26 50 0 0 chr10 52485209 52485249 -93104039 + AT_rich Low_complexity Low_complexity 1 40 0 898 246 62 14 chr10 52485267 52485659 -93103629 - L1MB3 LINE L1 -573 5597 5176 2700 217 58 42 chr10 52485663 52486246 -93103042 - L1ME3 LINE L1 -19 6143 5541 2170 78 45 36 chr10 52486246 52486554 -93102734 - AluY SINE Alu 0 311 1 2700 217 58 42 chr10 52486554 52486970 -93102318 - L1ME3 LINE L1 -621 5541 5133 2147 110 0 0 chr10 52486970 52487286 -93102002 - AluSg SINE Alu 0 316 1 2179 116 3 0 chr10 52487396 52487697 -93101591 - AluSx SINE Alu -10 302 1 1554 173 86 43 chr10 52487810 52488102 -93101186 + L1M4 LINE L1 2444 2765 -3381 2102 145 0 3 chr10 52488102 52488398 -93100890 - AluSx SINE Alu -12 300 6 1554 173 86 43 chr10 52488398 52488573 -93100715 + L1M4 LINE L1 2765 2931 -3215 257 227 55 68 chr10 52488609 52488772 -93100516 - L1ME3 LINE L1 -2300 3846 3686 24 0 0 0 chr10 52488838 52488862 -93100426 + AT_rich Low_complexity Low_complexity 1 24 0 648 117 39 39 chr10 52488862 52488990 -93100298 - L1MB2 LINE L1 -9 6162 6035 1100 129 0 31 chr10 52488997 52489190 -93100098 - L1MB2 LINE L1 -335 5836 5650 * 4543 143 28 39 chr10 52489176 52490121 -93099167 - L1MB3 LINE L1 -1095 5051 4118 2214 93 7 23 chr10 52490212 52490514 -93098774 - AluSc SINE Alu -12 297 1 1267 234 104 23 chr10 52490548 52491077 -93098211 - L1MC4 LINE L1 -75 7967 7396 491 217 117 8 chr10 52491210 52491330 -93097958 - FLAM_A SINE Alu 0 133 1 472 292 65 48 chr10 52491536 52491933 -93097355 - L1ME3 LINE L1 -3558 2588 2185 2216 110 3 16 chr10 52492372 52492682 -93096606 - AluSg SINE Alu -4 306 1 625 186 29 0 chr10 52492904 52493044 -93096244 - L1MA4 LINE L1 -6 6294 6151 345 315 51 25 chr10 52493045 52493359 -93095929 - HAL1b LINE L1 -808 540 219 2336 77 3 13 chr10 52493405 52493718 -93095570 - AluY SINE Alu -1 310 1 759 136 40 0 chr10 52493766 52493891 -93095397 - FRAM SINE Alu -2 174 45 2149 77 24 7 chr10 52494018 52494305 -93094983 - AluY SINE Alu -19 292 1 1797 183 0 7 chr10 52494876 52495176 -93094112 - AluJb SINE Alu -14 298 1 2208 103 0 7 chr10 52495630 52495930 -93093358 + AluSx SINE Alu 1 298 -14 5894 200 67 17 chr10 52495930 52497827 -93091461 - L1MB8 LINE L1 -10 6168 4119 2067 140 0 13 chr10 52497827 52498141 -93091147 - AluSx SINE Alu -2 310 1 5894 200 67 17 chr10 52498141 52498668 -93090620 - L1MB8 LINE L1 -2059 4119 3620 2297 89 0 15 chr10 52498645 52498970 -93090318 + L1PA6 LINE L1 1878 2197 -3949 * 12667 64 12 0 chr10 52498967 52500586 -93088702 + L1PA6 LINE L1 2685 4322 -1824 7321 59 12 2 chr10 52500586 52500598 -93088690 + L1PA6 LINE L1 4844 4854 -1300 2367 76 0 41 chr10 52500598 52500912 -93088376 - AluSp SINE Alu -12 301 1 7321 59 12 2 chr10 52500912 52502210 -93087078 + L1PA6 LINE L1 4854 6154 0 306 297 111 80 chr10 52502839 52503189 -93086099 + L1M2 LINE L1 834 1194 -5655 218 250 33 0 chr10 52503604 52503664 -93085624 + MIR SINE MIR 103 164 -98 232 329 100 12 chr10 52504487 52504657 -93084631 - MIR SINE MIR -33 229 45 386 207 23 23 chr10 52505323 52505410 -93083878 - MER3 DNA MER1_type -122 87 1 828 201 41 64 chr10 52505515 52505545 -93083743 - MER58A DNA MER1_type -2200 220 191 2255 105 0 0 chr10 52505545 52505841 -93083447 + AluSg SINE Alu 1 296 -14 828 201 41 64 chr10 52505841 52506029 -93083259 - MER58A DNA MER1_type -2229 191 7 332 296 26 65 chr10 52506032 52506067 -93083221 + L1 LINE L1 4981 5016 -1130 2238 113 0 0 chr10 52506067 52506369 -93082919 + AluSg SINE Alu 1 302 -8 332 296 26 65 chr10 52506369 52506563 -93082725 + L1 LINE L1 5016 5201 -945 371 230 9 70 chr10 52506640 52506669 -93082619 + L1M4 LINE L1 4251 4280 -1866 2324 78 27 0 chr10 52506669 52506963 -93082325 + AluSp SINE Alu 1 302 -11 371 230 9 70 chr10 52506963 52507069 -93082219 + L1M4 LINE L1 4280 4377 -1769 305 111 37 0 chr10 52507069 52507123 -93082165 + AluSp/q SINE Alu 248 303 0 393 155 0 28 chr10 52507176 52507247 -93082041 + THE1C LTR MaLR 1 69 -306 2016 103 17 3 chr10 52507550 52507840 -93081448 + AluSq SINE Alu 11 304 -9 731 216 134 0 chr10 52507851 52508022 -93081266 + MLT1A2 LTR MaLR 181 374 0 200 322 35 23 chr10 52508208 52508295 -93080993 + MIR3 SINE MIR 90 177 -31 181 311 67 59 chr10 52509891 52510010 -93079278 + L2 LINE L2 3183 3302 -11 2355 70 7 0 chr10 52510157 52510444 -93078844 - AluSc SINE Alu -15 294 6 283 313 35 9 chr10 52611411 52611526 -92977762 + L2 LINE L2 3169 3286 -27 296 225 75 0 chr10 52611540 52611620 -92977668 + HsTC2 DNA Tc2 3 88 -1810 824 265 5 5 chr10 52612723 52612908 -92976380 - MER58A DNA MER1_type 0 224 40 2303 113 0 0 chr10 52612910 52613210 -92976078 + AluSc SINE Alu 1 300 -9 6403 195 57 49 chr10 52613220 52613962 -92975326 + L1MB8 LINE L1 3631 4366 -1812 2222 133 0 0 chr10 52613962 52614264 -92975024 - AluSq SINE Alu -11 302 1 6403 195 57 49 chr10 52614264 52615216 -92974072 + L1MB8 LINE L1 4366 5363 -815 1825 169 3 3 chr10 52615216 52615506 -92973782 + AluJo SINE Alu 1 290 -22 6403 195 57 49 chr10 52615506 52616314 -92972974 + L1MB8 LINE L1 5363 6163 -15 21 36 0 0 chr10 52616583 52616611 -92972677 + AT_rich Low_complexity Low_complexity 1 28 0 2087 118 4 0 chr10 52616655 52616974 -92972314 - AluSx SINE Alu 0 320 1 23 68 0 0 chr10 52617440 52617484 -92971804 + AT_rich Low_complexity Low_complexity 1 44 0 315 258 157 13 chr10 52617490 52617649 -92971639 - L1MC/D LINE L1 -1991 5817 5636 349 258 178 38 chr10 52623050 52623364 -92965924 - L2 LINE L2 -10 3303 2946 320 260 163 66 chr10 52624503 52624865 -92964423 - L1MC4a LINE L1 -104 6017 5618 923 208 0 40 chr10 52626027 52626229 -92963059 + MER58A DNA MER1_type 27 220 -4 364 218 23 23 chr10 52626334 52626421 -92962867 + MER3 DNA MER1_type 1 87 -122 2435 77 0 0 chr10 52627042 52627340 -92961948 - AluY SINE Alu -13 298 1 1647 184 20 20 chr10 52627671 52627976 -92961312 - AluJo SINE Alu -7 305 1 261 139 0 0 chr10 52628011 52628054 -92961234 + (T)n Simple_repeat Simple_repeat 1 43 0 2292 139 53 31 chr10 52629285 52629475 -92959813 + MSTB LTR MaLR 1 185 -241 2105 110 0 4 chr10 52629475 52629790 -92959498 + AluSc SINE Alu 1 314 0 2292 139 53 31 chr10 52629790 52630015 -92959273 + MSTB LTR MaLR 185 426 0 254 254 15 0 chr10 52630111 52630178 -92959110 - L2 LINE L2 -1 3271 3204 2519 90 0 0 chr10 52630221 52630532 -92958756 + AluY SINE Alu 1 311 0 323 319 6 49 chr10 52630774 52630937 -92958351 - L2 LINE L2 -469 2845 2690 4768 164 75 11 chr10 52630938 52631824 -92957464 + L1MC1 LINE L1 5392 6333 0 2197 106 0 0 chr10 52632193 52632500 -92956788 + AluSg SINE Alu 1 307 0 6067 189 71 27 chr10 52632963 52633481 -92955807 + L1MB8 LINE L1 3616 4110 -2068 2111 112 11 0 chr10 52633481 52633768 -92955520 + AluSx SINE Alu 5 294 -18 6067 189 71 27 chr10 52633768 52635693 -92953595 + L1MB8 LINE L1 4110 6168 -10 1986 159 0 3 chr10 52635693 52635994 -92953294 - AluSx SINE Alu -12 300 1 283 205 82 107 chr10 52636362 52636484 -92952804 + L2 LINE L2 3165 3283 -30 721 246 5 21 chr10 52636527 52636714 -92952574 + MER20 DNA MER1_type 36 219 0 1317 214 16 0 chr10 52636752 52637009 -92952279 + AluJo SINE Alu 1 261 -51 911 288 73 9 chr10 52637009 52637349 -92951939 + LTR16B LTR ERVL 103 464 0 232 340 31 0 chr10 52637391 52637488 -92951800 + MIR3 SINE MIR 88 187 -21 262 267 47 68 chr10 52637848 52638039 -92951249 - MIR SINE MIR -3 259 73 2540 232 47 14 chr10 52638084 52638717 -92950571 - L1ME1 LINE L1 -5 6161 5508 343 288 8 17 chr10 52639405 52639523 -92949765 - MIR3 SINE MIR -42 166 50 440 282 19 32 chr10 52639528 52639684 -92949604 + L2 LINE L2 3152 3305 -8 2304 84 0 39 chr10 52639685 52639996 -92949292 + AluY SINE Alu 1 299 -12 289 267 58 0 chr10 52640051 52640137 -92949151 - L2 LINE L2 -24 3248 3158 574 165 21 0 chr10 52640372 52640469 -92948819 + AluJo SINE Alu 38 136 -176 1467 141 0 0 chr10 52640511 52640717 -92948571 + AluJb SINE Alu 81 286 -26 426 229 0 29 chr10 52640947 52641052 -92948236 + L1MC5 LINE L1 7697 7798 -163 2239 95 3 0 chr10 52641118 52641412 -92947876 + AluY SINE Alu 1 295 -16 207 377 6 29 chr10 52645110 52645285 -92944003 + G-rich Low_complexity Low_complexity 4 174 0 1643 149 0 22 chr10 52645424 52645754 -92943534 + AluSx SINE Alu 24 347 0 620 301 171 11 chr10 52645770 52646239 -92943049 - L1MC/D LINE L1 -1991 5817 5274 2207 109 0 0 chr10 52646270 52646577 -92942711 - AluSx SINE Alu 0 307 1 9350 36 11 1 chr10 52647085 52648967 -92940321 + L1PA4 LINE L1 4255 6154 -1 705 310 25 8 chr10 52650091 52650330 -92938958 - MIR SINE MIR -5 257 15 3233 152 30 14 chr10 52650419 52651086 -92938202 + MER50 LTR ERV1 1 711 -23 908 376 3 0 chr10 52651091 52651437 -92937851 + LTR16B LTR ERVL 105 451 -13 985 302 66 42 chr10 52651891 52652466 -92936822 + MERVL LTR ERVL 468 1062 -3934 2289 204 48 40 chr10 52652466 52652965 -92936323 - MLT1D LTR MaLR -2 503 1 985 302 66 42 chr10 52652965 52653046 -92936242 + MERVL LTR ERVL 1062 1140 -3856 614 272 17 28 chr10 52653043 52653223 -92936065 + MERVL LTR ERVL 1915 2092 -2904 * 307 307 24 18 chr10 52653370 52653536 -92935752 + MERVL LTR ERVL 3102 3268 -2386 491 315 84 15 chr10 52655276 52655479 -92933809 + MIR SINE MIR 13 229 -33 599 266 25 0 chr10 52655518 52655676 -92933612 + MER103 DNA DNA 5 166 0 852 170 6 48 chr10 52655920 52656085 -92933203 + FRAM SINE Alu 1 157 -19 312 301 36 24 chr10 52656661 52656827 -92932461 - MER117 DNA MER1_type -29 168 1 249 361 12 0 chr10 52656870 52656953 -92932335 - MIR SINE MIR -90 118 35 244 64 43 0 chr10 52657266 52657313 -92931975 + (GA)n Simple_repeat Simple_repeat 1 49 0 283 296 12 0 chr10 52657490 52657571 -92931717 - MIR3 SINE MIR -5 203 122 517 304 118 27 chr10 52657672 52658001 -92931287 + MARNA DNA Mariner 71 429 -157 245 294 37 59 chr10 52660130 52660266 -92929022 - MLT1L LTR MaLR -7 608 476 291 318 68 23 chr10 52660421 52660553 -92928735 - MLT1J LTR MaLR -333 178 41 377 241 106 21 chr10 52660606 52660747 -92928541 - MLT1I LTR MaLR -63 346 194 535 389 16 43 chr10 52661025 52661328 -92927960 - L2 LINE L2 0 3272 2978 180 182 0 0 chr10 52661333 52661377 -92927911 + (TG)n Simple_repeat Simple_repeat 2 45 0 185 0 40 0 chr10 52661769 52661794 -92927494 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 1334 38 0 0 chr10 52662535 52662694 -92926594 - L1PA5 LINE L1 -3148 2998 2840 20302 45 6 0 chr10 52662694 52665847 -92923441 + L1PA5 LINE L1 3000 6154 0 457 291 83 65 chr10 52665968 52666198 -92923090 + MIR SINE MIR 12 245 -17 187 318 147 52 chr10 52666622 52666968 -92922320 - L2 LINE L2 -922 2392 1994 2542 111 19 30 chr10 52666968 52667336 -92921952 - THE1B LTR MaLR 0 364 1 187 318 147 52 chr10 52667336 52667430 -92921858 - L2 LINE L2 -1320 1994 1910 798 279 124 62 chr10 52667489 52667716 -92921572 + MLT1J LTR MaLR 1 212 -299 2905 106 18 32 chr10 52667716 52668109 -92921179 + MSTA LTR MaLR 1 389 -39 1989 155 0 10 chr10 52668109 52668412 -92920876 - AluSq SINE Alu -13 300 1 2905 106 18 32 chr10 52668412 52668452 -92920836 + MSTA LTR MaLR 389 428 0 798 279 124 62 chr10 52668452 52668658 -92920630 + MLT1J LTR MaLR 212 461 -50 2739 173 28 9 chr10 52668861 52669319 -92919969 + MLT1C LTR MaLR 1 467 0 2398 63 0 3 chr10 52669877 52670177 -92919111 + AluY SINE Alu 1 299 -12 1175 275 54 37 chr10 52670625 52671240 -92918048 - L1MC5 LINE L1 -48 7913 7289 1556 143 28 39 chr10 52671260 52671546 -92917742 + LTR8 LTR ERV1 409 691 0 409 182 0 0 chr10 52671547 52671624 -92917664 - L1 LINE L1 -2793 3353 3277 287 349 37 0 chr10 52672157 52672266 -92917022 - MIR SINE MIR -86 176 64 180 318 131 30 chr10 52672298 52672496 -92916792 + MIR SINE MIR 41 258 -4 249 239 60 30 chr10 52673797 52673864 -92915424 + MIR SINE MIR 82 150 -58 2514 90 0 0 chr10 52673947 52674257 -92915031 - AluSx SINE Alu 0 312 3 391 252 103 80 chr10 52674261 52674456 -92914832 - MER113 DNA MER1_type? -205 316 110 709 181 7 43 chr10 52674456 52674594 -92914694 + FLAM_A SINE Alu 1 133 0 391 252 103 80 chr10 52674594 52674700 -92914588 - MER113 DNA MER1_type? -411 110 8 342 261 23 34 chr10 52674711 52674799 -92914489 + MIR SINE MIR 64 150 -58 2308 114 0 0 chr10 52674872 52675179 -92914109 - AluSx SINE Alu -5 307 1 220 82 197 49 chr10 52675262 52675323 -92913965 + MIR SINE MIR 161 230 -32 22 0 0 0 chr10 52675343 52675365 -92913923 + AT_rich Low_complexity Low_complexity 1 22 0 2214 92 0 67 chr10 52675720 52676048 -92913240 + AluSq SINE Alu 1 306 -7 2122 113 0 3 chr10 52676134 52676427 -92912861 + AluSx SINE Alu 1 292 -20 512 81 11 0 chr10 52676427 52676514 -92912774 + (TA)n Simple_repeat Simple_repeat 2 89 0 2116 117 0 3 chr10 52678307 52678597 -92910691 + AluSg SINE Alu 1 289 -21 184 280 20 20 chr10 52680191 52680241 -92909047 - MER5A DNA MER1_type 0 189 140 835 131 7 58 chr10 52680258 52680395 -92908893 - AluSq/x SINE Alu -180 133 4 228 67 0 0 chr10 52681641 52681671 -92907617 + (ATG)n Simple_repeat Simple_repeat 3 32 0 438 351 60 46 chr10 52681762 52682178 -92907110 - L3 LINE CR1 -24 1553 1132 374 207 219 0 chr10 52682279 52682361 -92906927 - MER5A DNA MER1_type -80 109 10 361 319 135 11 chr10 52682833 52683018 -92906270 + L1MC4a LINE L1 5679 5886 -1922 851 287 76 23 chr10 52683253 52683765 -92905523 - L1MC4 LINE L1 -494 7548 7010 1391 133 38 0 chr10 52683765 52683975 -92905313 - AluJb SINE Alu -4 308 91 244 196 0 0 chr10 52683976 52684022 -92905266 - L1MC4 LINE L1 -1029 7013 6968 1851 137 20 3 chr10 52684705 52685005 -92904283 + AluSx SINE Alu 1 305 -7 396 232 178 88 chr10 52685763 52686117 -92903171 + L2 LINE L2 2918 3303 -10 661 253 121 27 chr10 52686169 52686615 -92902673 - MLT1H1 LTR MaLR -7 542 35 1636 159 59 17 chr10 52687360 52687649 -92901639 - AluSq SINE Alu -12 301 1 22 56 0 0 chr10 52687731 52687767 -92901521 + AT_rich Low_complexity Low_complexity 1 36 0 2380 74 0 3 chr10 52687777 52688076 -92901212 + AluY SINE Alu 1 298 -13 2118 112 34 0 chr10 52688863 52689157 -92900131 - AluSx SINE Alu -8 304 1 1081 191 19 25 chr10 52689224 52689588 -92899700 - Tigger2 DNA MER2_type -10 2708 1 381 261 191 28 chr10 52689773 52689988 -92899300 + MIR SINE MIR 2 251 -11 1233 256 75 30 chr10 52691221 52691711 -92897577 - MER39 LTR ERV1 -2 682 11 2224 125 0 6 chr10 52692141 52692452 -92896836 + AluSx SINE Alu 1 309 -3 522 270 80 6 chr10 52692625 52692788 -92896500 + L1ME LINE L1 5566 5740 -381 2253 109 3 7 chr10 52693161 52693465 -92895823 + AluSq SINE Alu 1 303 -10 25 31 0 0 chr10 52693682 52693714 -92895574 + AT_rich Low_complexity Low_complexity 1 32 0 2034 130 0 3 chr10 52693719 52694031 -92895257 + AluSq SINE Alu 1 311 0 2138 112 17 7 chr10 52694243 52694539 -92894749 + AluSq SINE Alu 1 299 -14 2388 75 3 0 chr10 52695089 52695382 -92893906 + AluSx SINE Alu 1 294 -18 330 152 13 89 chr10 52695542 52695621 -92893667 + L1MC/D LINE L1 5682 5754 -605 224 358 75 37 chr10 52695777 52695911 -92893377 + L2 LINE L2 3118 3256 -16 223 352 74 0 chr10 52696390 52696498 -92892790 + MIR SINE MIR 25 140 -122 2158 116 0 28 chr10 52697303 52697623 -92891665 + AluSx SINE Alu 2 312 0 369 200 14 0 chr10 52697974 52698044 -92891244 + MER58 DNA MER1_type 2349 2419 -1 1904 164 0 0 chr10 52699028 52699320 -92889968 + AluJb SINE Alu 1 292 -20 625 180 16 16 chr10 52699377 52699499 -92889789 + L1MB7 LINE L1 6044 6165 -19 2165 113 0 26 chr10 52699688 52699856 -92889432 - AluSx SINE Alu -11 301 143 2354 91 10 10 chr10 52699856 52700164 -92889124 - AluY SINE Alu -3 308 1 2165 113 0 26 chr10 52700164 52700304 -92888984 - AluSx SINE Alu -169 143 1 27 0 0 0 chr10 52700311 52700338 -92888950 + AT_rich Low_complexity Low_complexity 1 27 0 1559 152 0 0 chr10 52700802 52701032 -92888256 + MER30 DNA MER1_type 1 230 0 466 232 10 155 chr10 52701040 52701101 -92888187 - MER5B DNA MER1_type 0 178 110 2386 98 0 13 chr10 52701101 52701417 -92887871 + AluSx SINE Alu 1 312 0 466 232 10 155 chr10 52701417 52701562 -92887726 - MER5B DNA MER1_type -68 110 2 194 227 23 0 chr10 52701610 52701654 -92887634 - MER5A DNA MER1_type -80 109 65 2414 77 0 3 chr10 52702278 52702576 -92886712 - AluY SINE Alu -14 297 1 2480 85 0 7 chr10 52703117 52703424 -92885864 + AluSg SINE Alu 1 305 -5 806 306 38 4 chr10 52703888 52704123 -92885165 + MIR SINE MIR 15 257 -5 2308 90 0 0 chr10 52704255 52704544 -92884744 + AluSg SINE Alu 1 289 -21 3389 172 17 3 chr10 52704896 52705546 -92883742 + L1MB7 LINE L1 5482 6140 -44 282 113 0 206 chr10 52705554 52705591 -92883697 + L1MB8 LINE L1 6102 6109 -69 1563 186 57 10 chr10 52705591 52705887 -92883401 + AluJo SINE Alu 1 310 -2 282 113 0 206 chr10 52705887 52705946 -92883342 + L1MB8 LINE L1 6109 6178 0 404 158 0 13 chr10 52706843 52706919 -92882369 + L1MB3 LINE L1 5799 5873 -310 228 259 77 70 chr10 52707900 52708043 -92881245 - LTR59 LTR ERV1 -120 477 334 2356 123 0 0 chr10 52708338 52708647 -92880641 + AluSx SINE Alu 1 309 -3 2398 87 3 3 chr10 52708818 52709118 -92880170 - AluSg SINE Alu -10 300 1 341 249 111 14 chr10 52709651 52709868 -92879420 - L1MDa LINE L1 -3958 2582 2345 1553 169 12 51 chr10 52709995 52710204 -92879084 - L1PBa LINE L1 -3627 3235 3019 1235 126 259 4 chr10 52710204 52710451 -92878837 + AluYb8 SINE Alu 5 314 -4 1553 169 12 51 chr10 52710451 52710702 -92878586 - L1PBa LINE L1 -3843 3019 2800 3112 142 56 13 chr10 52710710 52711317 -92877971 - L1PBa LINE L1 -4224 2639 2007 1733 145 189 19 chr10 52711356 52711722 -92877566 - MSTA LTR MaLR 0 428 1 551 303 118 5 chr10 52712461 52712682 -92876606 + MIR SINE MIR 1 246 -16 1784 239 3 18 chr10 52712701 52712839 -92876449 - MER70A LTR ERVL 0 472 333 2345 68 0 0 chr10 52712839 52713117 -92876171 + AluY SINE Alu 3 280 -31 1784 239 3 18 chr10 52713117 52713367 -92875921 - MER70A LTR ERVL -139 333 90 321 203 0 0 chr10 52713366 52713425 -92875863 - MER70A LTR ERVL -313 159 101 * 265 266 5 109 chr10 52713565 52713602 -92875686 + L1MC5 LINE L1 7719 7758 -203 3253 94 29 17 chr10 52713602 52714080 -92875208 + L1PA13 LINE L1 5680 6163 0 265 266 5 109 chr10 52714080 52714234 -92875054 + L1MC5 LINE L1 7758 7890 -71 555 249 109 31 chr10 52714713 52714906 -92874382 - MIR SINE MIR -8 254 47 315 0 0 0 chr10 52714907 52714942 -92874346 + (TG)n Simple_repeat Simple_repeat 2 36 0 590 68 11 0 chr10 52714942 52715030 -92874258 + (TAGA)n Simple_repeat Simple_repeat 4 92 0 381 338 49 39 chr10 52715178 52715382 -92873906 - L2 LINE L2 -228 3044 2839 2137 125 3 0 chr10 52715564 52715860 -92873428 - AluSp SINE Alu -16 297 1 1472 199 36 27 chr10 52715860 52715973 -92873315 - L1M4 LINE L1 -3605 2777 2667 2496 82 0 0 chr10 52715973 52716278 -92873010 - AluY SINE Alu -6 305 1 1472 199 36 27 chr10 52716278 52716728 -92872560 - L1M4 LINE L1 -3715 2667 2214 217 252 155 48 chr10 52716939 52717042 -92872246 + L2 LINE L2 3200 3313 0 870 211 48 5 chr10 52717081 52717289 -92871999 - MLT1H1 LTR MaLR -8 547 331 3938 20 0 0 chr10 52718454 52718901 -92870387 - L1PA2 LINE L1 -2 6153 5707 2341 107 0 10 chr10 52719817 52720126 -92869162 - AluSq SINE Alu -7 306 1 1860 146 27 7 chr10 52720273 52720567 -92868721 - AluSx SINE Alu -12 300 1 412 269 65 5 chr10 52720965 52721151 -92868137 - AluSg/x SINE Alu -7 302 106 2221 108 7 0 chr10 52722060 52722357 -92866931 + AluSq SINE Alu 1 299 -14 382 320 94 0 chr10 52722361 52722564 -92866724 - Charlie2a DNA MER1_type -1907 955 734 2161 87 56 0 chr10 52723339 52723625 -92865663 + AluY SINE Alu 2 303 -8 2162 108 0 0 chr10 52723831 52724109 -92865179 + AluSg SINE Alu 1 278 -32 186 43 0 0 chr10 52724109 52724132 -92865156 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 748 203 47 7 chr10 52724501 52724649 -92864639 + AluJb SINE Alu 140 293 -19 1905 87 0 0 chr10 52725403 52725669 -92863619 + pTR5 LTR ERV1 127 392 -2046 2347 68 0 0 chr10 52725684 52725996 -92863292 + AluY SINE Alu 1 312 0 536 229 106 0 chr10 52725996 52726184 -92863104 + L1M4 LINE L1 2478 2685 -3461 306 266 234 8 chr10 52726207 52726331 -92862957 - L2 LINE L2 0 3272 3121 543 267 24 48 chr10 52726550 52726715 -92862573 + L2 LINE L2 3153 3313 0 352 316 23 41 chr10 52726869 52727087 -92862201 + MLT1K LTR MaLR 3 216 -372 361 294 20 20 chr10 52727134 52727287 -92862001 + (TGGA)n Simple_repeat Simple_repeat 4 156 0 984 198 60 5 chr10 52727295 52727576 -92861712 + L1M4 LINE L1 2703 3097 -3049 2227 113 0 25 chr10 52727576 52727861 -92861427 + AluY SINE Alu 1 279 -32 354 45 0 0 chr10 52727861 52727905 -92861383 + (CAAA)n Simple_repeat Simple_repeat 3 46 0 2227 113 0 25 chr10 52727905 52727938 -92861350 + AluY SINE Alu 279 311 0 984 198 60 5 chr10 52727938 52728004 -92861284 + L1M4 LINE L1 3097 3158 -2988 1791 134 58 4 chr10 52728010 52728285 -92861003 + AluSg1 SINE Alu 16 305 -4 312 122 0 0 chr10 52728347 52728396 -92860892 - MER58 DNA MER1_type 0 2420 2372 712 251 30 48 chr10 52728552 52728823 -92860465 + L1M4 LINE L1 3339 3604 -2542 189 254 45 45 chr10 52729304 52729371 -92859917 + MIR SINE MIR 89 155 -107 321 97 44 257 chr10 52729493 52729699 -92859589 - L1MB4 LINE L1 0 6180 6019 576 224 119 35 chr10 52729786 52729987 -92859301 - MER20 DNA MER1_type -1 218 1 1043 155 0 0 chr10 52730082 52730237 -92859051 + FRAM SINE Alu 9 163 -13 189 279 59 0 chr10 52730977 52731045 -92858243 + MIR SINE MIR 77 148 -114 288 53 0 0 chr10 52732402 52732440 -92856848 + (T)n Simple_repeat Simple_repeat 1 38 0 2613 74 0 0 chr10 52733142 52733452 -92855836 + AluY SINE Alu 1 310 -1 296 206 196 0 chr10 52733897 52733994 -92855294 - L2 LINE L2 -218 3054 2939 570 259 122 15 chr10 52734342 52734547 -92854741 - MIR SINE MIR -34 228 2 346 284 80 31 chr10 52735694 52735856 -92853432 - L1MC4 LINE L1 -2 8040 7871 329 300 53 6 chr10 52735888 52736058 -92853230 - L1MC4 LINE L1 -170 7872 7695 234 125 0 0 chr10 52736155 52736187 -92853101 - MER1B DNA MER1_type 0 329 298 * 1217 111 48 34 chr10 52736186 52736394 -92852894 - MER1B DNA MER1_type -86 211 1 701 222 23 28 chr10 52737197 52737373 -92851915 - MER5B DNA MER1_type -3 175 1 361 223 85 152 chr10 52737738 52738021 -92851267 + L1ME3A LINE L1 5693 5961 -209 558 165 23 30 chr10 52738135 52738268 -92851020 - AluSq/x SINE Alu -178 134 3 1121 238 90 43 chr10 52738269 52738736 -92850552 + MLT1H LTR MaLR 45 533 -16 185 222 22 0 chr10 52739231 52739276 -92850012 - L2 LINE L2 0 3313 3268 879 150 0 0 chr10 52739429 52739556 -92849732 + AluSg/x SINE Alu 165 291 -19 270 269 0 15 chr10 52739694 52739761 -92849527 + L2 LINE L2 3206 3271 -1 192 268 195 16 chr10 52739826 52739949 -92849339 - MIR3 SINE MIR -62 146 2 483 258 43 25 chr10 52740908 52741089 -92848199 - L1MCa LINE L1 -4845 1581 1392 2567 155 38 5 chr10 52741089 52741535 -92847753 - LOR1b LTR ERV1 0 461 1 483 258 43 25 chr10 52741535 52741632 -92847656 - L1MCa LINE L1 -5034 1392 1298 479 219 142 58 chr10 52741725 52741930 -92847358 + MLT1A1 LTR MaLR 144 365 0 458 304 61 6 chr10 52741976 52742157 -92847131 + L2 LINE L2 3122 3312 -1 1741 167 20 14 chr10 52743173 52743467 -92845821 - AluSx SINE Alu -16 296 1 1795 164 23 3 chr10 52743738 52744042 -92845246 + AluJo SINE Alu 1 310 -2 26 0 0 0 chr10 52744206 52744232 -92845056 + GC_rich Low_complexity Low_complexity 1 26 0 600 271 106 44 chr10 52744407 52744858 -92844430 + MLT1L LTR MaLR 137 615 0 1075 194 93 32 chr10 52745661 52745940 -92843348 - L1MD2 LINE L1 -54 6305 6010 894 196 5 10 chr10 52745946 52746140 -92843148 - L1MD2 LINE L1 -398 5961 5769 1723 240 41 2 chr10 52746153 52746838 -92842450 - L1MD2 LINE L1 -722 5637 4929 206 304 0 38 chr10 52747603 52747682 -92841606 + MIR SINE MIR 118 193 -69 530 260 34 64 chr10 52748425 52748629 -92840659 - MIR SINE MIR -57 205 8 356 248 128 8 chr10 52749038 52749272 -92840016 + L2 LINE L2 2615 2876 -438 388 183 143 46 chr10 52750238 52750413 -92838875 - L2 LINE L2 -249 3064 2873 181 80 0 0 chr10 52750988 52751013 -92838275 - MIR SINE MIR -118 144 120 3483 239 51 40 chr10 52752018 52752732 -92836556 + L1M4 LINE L1 3009 3745 -2401 2436 66 0 41 chr10 52752732 52753049 -92836239 - AluSg SINE Alu -6 304 1 3483 239 51 40 chr10 52753049 52753594 -92835694 + L1M4 LINE L1 3745 4282 -1864 1179 177 57 52 chr10 52755629 52755687 -92833601 + AluJb SINE Alu 63 119 -193 198 0 0 0 chr10 52755687 52755709 -92833579 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 1179 177 57 52 chr10 52755709 52755876 -92833412 + AluJb SINE Alu 119 292 -20 1780 108 129 39 chr10 52755876 52756162 -92833126 + AluSx SINE Alu 1 312 0 1179 177 57 52 chr10 52756162 52756183 -92833105 + AluJb SINE Alu 292 311 -1 579 323 25 39 chr10 52756212 52756491 -92832797 - MER4B-int LTR ERV1 -6135 623 349 2183 200 111 6 chr10 52756871 52757376 -92831912 - LTR64 LTR ERVK 0 558 1 255 369 33 0 chr10 52757632 52757754 -92831534 - MIR SINE MIR -65 143 18 395 342 30 39 chr10 52757927 52758161 -92831127 + L2 LINE L2 2906 3137 -135 500 166 110 0 chr10 52758164 52758327 -92830961 - AluSp SINE Alu -16 297 117 185 237 119 42 chr10 52758430 52758548 -92830740 + L2 LINE L2 2933 3059 -254 * 705 232 30 26 chr10 52758528 52758711 -92830577 + MIR SINE MIR 51 235 -27 4835 99 27 12 chr10 52758723 52759470 -92829818 - HSMAR2 DNA Mariner -1 1301 544 904 157 118 17 chr10 52760025 52760652 -92828636 + L1MC2 LINE L1 5544 6333 -11 1271 164 0 20 chr10 52760702 52760903 -92828385 + AluJo SINE Alu 1 197 -115 717 108 0 47 chr10 52761110 52761239 -92828049 - FLAM_C SINE Alu 0 143 21 839 230 54 94 chr10 52761578 52761676 -92827612 + MLT1C LTR MaLR 2 102 -365 2698 48 0 10 chr10 52761676 52761990 -92827298 + AluY SINE Alu 1 311 0 839 230 54 94 chr10 52761990 52762339 -92826949 + MLT1C LTR MaLR 102 431 -36 2397 93 0 0 chr10 52763064 52763364 -92825924 + AluY SINE Alu 1 300 -11 2088 86 19 0 chr10 52763364 52763619 -92825669 + AluY SINE Alu 36 296 -15 216 213 49 33 chr10 52764826 52764887 -92824401 - MIR3 SINE MIR -45 163 102 970 153 12 0 chr10 52765099 52765269 -92824019 - FAM SINE Alu 0 175 4 492 327 38 15 chr10 52765466 52765729 -92823559 - L1ME3A LINE L1 -222 5948 5680 418 203 0 0 chr10 52766038 52766117 -92823171 - MIR SINE MIR -105 157 79 241 125 0 0 chr10 52766117 52766157 -92823131 - MIR SINE MIR -144 118 79 274 125 0 0 chr10 52766157 52766197 -92823091 - MIR SINE MIR -144 118 79 439 175 52 0 chr10 52766197 52766294 -92822994 - MIR SINE MIR -144 118 17 2542 75 0 3 chr10 52766458 52766766 -92822522 - AluY SINE Alu -4 307 1 439 194 93 37 chr10 52766898 52767006 -92822282 + MIR SINE MIR 36 149 -59 235 232 49 12 chr10 52767184 52767266 -92822022 + MIR SINE MIR 63 147 -61 533 203 6 0 chr10 52768205 52768382 -92820906 + GA-rich Low_complexity Low_complexity 1 178 0 25 0 0 0 chr10 52769164 52769189 -92820099 + GC_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr10 52769284 52769307 -92819981 + GC_rich Low_complexity Low_complexity 1 23 0 197 274 41 0 chr10 52769740 52769813 -92819475 - MIR SINE MIR -110 152 77 2058 90 19 4 chr10 52769942 52770209 -92819079 + AluSg SINE Alu 21 291 -19 380 174 22 0 chr10 52770291 52770383 -92818905 - L1MB3 LINE L1 -1 6182 6089 530 206 9 9 chr10 52770386 52770521 -92818767 - AluJb SINE Alu 0 310 176 1051 222 156 3 chr10 52770770 52771072 -92818216 - MLT1F1 LTR MaLR -117 450 103 * 1289 224 30 62 chr10 52771071 52771441 -92817847 + MLT1A1 LTR MaLR 8 365 0 358 307 30 0 chr10 52771441 52771542 -92817746 - MLT1F1 LTR MaLR -458 109 6 1054 225 61 13 chr10 52773183 52773494 -92815794 + LTR16A LTR ERVL 110 435 -15 201 74 0 0 chr10 52773512 52773539 -92815749 + (TTCCC)n Simple_repeat Simple_repeat 1 27 0 743 263 113 27 chr10 52773891 52774226 -92815062 - HAL1 LINE L1 -586 1921 1558 908 89 8 0 chr10 52774357 52774480 -92814808 + FLAM_C SINE Alu 1 124 -19 246 280 92 19 chr10 52774754 52774961 -92814327 - L1M4 LINE L1 -2980 3166 2945 309 206 98 0 chr10 52777066 52777158 -92812130 + MER5A DNA MER1_type 9 109 -80 256 242 61 0 chr10 52777367 52777433 -92811855 - L2 LINE L2 -2 3311 3242 23 0 0 0 chr10 52777642 52777665 -92811623 + GC_rich Low_complexity Low_complexity 1 23 0 595 269 124 59 chr10 52778355 52778742 -92810546 - MLT1K LTR MaLR -31 557 146 1703 173 48 30 chr10 52779240 52779611 -92809677 + L1MB7 LINE L1 5632 6009 -175 494 215 40 40 chr10 52779618 52779767 -92809521 - MIR SINE MIR -83 179 31 1030 318 28 30 chr10 52781173 52781607 -92807681 + MLT1J LTR MaLR 1 433 -78 22 0 0 0 chr10 52782723 52782745 -92806543 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr10 52782836 52782860 -92806428 + AT_rich Low_complexity Low_complexity 1 24 0 238 177 81 16 chr10 52783228 52783290 -92805998 + L2 LINE L2 3205 3270 -2 293 289 150 37 chr10 52783835 52784108 -92805180 + L2 LINE L2 2456 2759 -555 34 0 0 0 chr10 52785175 52785209 -92804079 + GC_rich Low_complexity Low_complexity 1 34 0 269 227 9 36 chr10 52785749 52785859 -92803429 + (TG)n Simple_repeat Simple_repeat 1 107 0 2562 215 41 76 chr10 52787194 52788009 -92801279 - L1M3 LINE L1 -735 5448 4629 907 269 80 12 chr10 52788752 52789090 -92800198 + L1MB7 LINE L1 5760 6120 -64 223 244 11 11 chr10 52789617 52789707 -92799581 + (CA)n Simple_repeat Simple_repeat 1 90 0 419 281 30 49 chr10 52790097 52790261 -92799027 - MIR SINE MIR -79 183 23 239 361 52 0 chr10 52790305 52790402 -92798886 - L2 LINE L2 -32 3281 3180 707 233 37 0 chr10 52790571 52790734 -92798554 - LTR42 LTR ERVL 0 495 327 1687 147 59 29 chr10 52792045 52792317 -92796971 + AluJo SINE Alu 1 280 -32 378 233 11 0 chr10 52793314 52793404 -92795884 - L2 LINE L2 -2 3311 3221 319 196 0 0 chr10 52793611 52793662 -92795626 + L1MC4 LINE L1 6653 6703 -1339 416 328 140 24 chr10 52793672 52794115 -92795173 - L2 LINE L2 -36 3277 2757 450 216 17 122 chr10 52796463 52796644 -92792644 + MIR SINE MIR 97 258 -4 376 238 68 102 chr10 52797263 52797469 -92791819 + L1ME4a LINE L1 5901 6099 -22 2008 153 0 9 chr10 52797773 52798099 -92791189 - MER7A DNA MER2_type -24 322 2 1415 273 85 31 chr10 52798856 52799442 -92789846 + L1MEc LINE L1 54 671 -5725 2003 252 65 48 chr10 52799495 52800341 -92788947 + L1M4 LINE L1 3268 4127 -2019 * 5285 155 26 17 chr10 52800340 52801922 -92787366 + L1MA8 LINE L1 4687 6287 -4 21 0 0 0 chr10 52801922 52801943 -92787345 + AT_rich Low_complexity Low_complexity 1 21 0 481 208 25 161 chr10 52801947 52802183 -92787105 + L1M4 LINE L1 4114 4317 -1829 25 0 0 0 chr10 52803006 52803031 -92786257 + AT_rich Low_complexity Low_complexity 1 25 0 36 23 0 0 chr10 52803091 52803134 -92786154 + AT_rich Low_complexity Low_complexity 1 43 0 304 65 22 0 chr10 52803243 52803289 -92785999 + MADE1 DNA Mariner 1 47 -33 419 264 21 50 chr10 52803322 52803462 -92785826 - MIR SINE MIR -73 189 54 22 35 0 0 chr10 52803652 52803681 -92785607 + AT_rich Low_complexity Low_complexity 1 29 0 23 68 0 0 chr10 52803720 52803764 -92785524 + AT_rich Low_complexity Low_complexity 1 44 0 537 213 19 25 chr10 52804182 52804342 -92784946 - MER104 DNA Tc2 -8 172 14 315 179 0 0 chr10 52804704 52804771 -92784517 + (CA)n Simple_repeat Simple_repeat 2 68 0 497 320 75 86 chr10 52805339 52805655 -92783633 + L2 LINE L2 2304 2622 -650 1139 134 0 0 chr10 52805655 52805826 -92783462 - L1PA15 LINE L1 -7 6158 5988 497 320 75 86 chr10 52805826 52806498 -92782790 + L2 LINE L2 2622 3271 -1 3719 155 89 48 chr10 52806534 52807327 -92781961 + LTR1B LTR ERV1 1 826 0 1958 185 43 5 chr10 52807350 52807794 -92781494 - Charlie4a DNA MER1_type -1 507 47 247 295 71 0 chr10 52808080 52808192 -92781096 + MIR SINE MIR 103 222 -40 24 67 0 0 chr10 52809146 52809191 -92780097 + AT_rich Low_complexity Low_complexity 1 45 0 1342 272 104 17 chr10 52809761 52810224 -92779064 - L2 LINE L2 -418 2896 2394 441 0 0 0 chr10 52812269 52812318 -92776970 + (CA)n Simple_repeat Simple_repeat 2 50 0 9314 222 52 17 chr10 52812404 52815101 -92774187 + L1MB7 LINE L1 2417 5019 -1165 1963 108 4 0 chr10 52815101 52815359 -92773929 - AluSc SINE Alu -22 287 29 9314 222 52 17 chr10 52815359 52815959 -92773329 + L1MB7 LINE L1 5019 5846 -338 2147 119 3 0 chr10 52815959 52816252 -92773036 + AluSq SINE Alu 1 294 -19 9314 222 52 17 chr10 52816252 52816412 -92772876 + L1MB7 LINE L1 5846 5999 -185 276 30 0 0 chr10 52817923 52817956 -92771332 + (CA)n Simple_repeat Simple_repeat 2 34 0 387 311 77 49 chr10 52818949 52819132 -92770156 - MIR3 SINE MIR -5 203 16 324 265 94 77 chr10 52819880 52820050 -92769238 + HAL1 LINE L1 2300 2472 -35 2407 82 0 9 chr10 52820745 52821085 -92768203 - L1P LINE L1 -931 5215 4879 * 2889 82 0 2 chr10 52821067 52821467 -92767821 - L1P LINE L1 -1021 5125 4727 4863 48 8 0 chr10 52821467 52822058 -92767230 + L1PA7 LINE L1 5551 6153 -1 983 180 89 145 chr10 52822679 52822957 -92766331 + MSTB2 LTR MaLR 1 242 -215 2313 104 0 3 chr10 52822957 52823264 -92766024 - AluSg SINE Alu -4 306 1 983 180 89 145 chr10 52823264 52823469 -92765819 + MSTB2 LTR MaLR 242 457 0 2050 151 3 0 chr10 52823580 52823885 -92765403 + AluSx SINE Alu 1 306 -6 21 0 0 0 chr10 52824461 52824482 -92764806 + AT_rich Low_complexity Low_complexity 1 21 0 184 254 0 55 chr10 52824709 52824764 -92764524 - L2 LINE L2 0 3272 3221 184 208 19 0 chr10 52824902 52824955 -92764333 - L2 LINE L2 -304 2968 2915 190 290 58 0 chr10 52825035 52825104 -92764184 - MIR SINE MIR -56 206 134 690 289 12 21 chr10 52825503 52825745 -92763543 - MER102a DNA MER1_type 0 330 91 452 219 59 132 chr10 52825745 52826047 -92763241 + L1MC5 LINE L1 7454 7711 -250 3229 94 30 4 chr10 52826047 52826514 -92762774 + L1PA13 LINE L1 5676 6154 -9 452 219 59 132 chr10 52826514 52826682 -92762606 + L1MC5 LINE L1 7711 7890 -71 548 249 109 31 chr10 52827161 52827354 -92761934 - MIR SINE MIR -8 254 47 315 0 0 0 chr10 52827355 52827390 -92761898 + (TG)n Simple_repeat Simple_repeat 2 36 0 590 68 11 0 chr10 52827390 52827478 -92761810 + (TAGA)n Simple_repeat Simple_repeat 4 92 0 358 338 49 39 chr10 52827626 52827830 -92761458 - L2 LINE L2 -228 3044 2839 1831 172 0 3 chr10 52828012 52828309 -92760979 - AluJo SINE Alu -16 296 1 432 294 96 6 chr10 52829053 52829230 -92760058 + MER91A DNA MER1_type 3 195 -1 1606 203 57 37 chr10 52829345 52829803 -92759485 + MLT1C LTR MaLR 1 467 0 490 289 84 12 chr10 52829834 52830000 -92759288 + MIR SINE MIR 75 252 -10 186 118 0 0 chr10 52830098 52830132 -92759156 + (TA)n Simple_repeat Simple_repeat 2 35 0 257 212 76 0 chr10 52830297 52830363 -92758925 + MLT1J2 LTR MaLR 71 141 -309 294 238 16 0 chr10 52830371 52830434 -92758854 + MLT1J2 LTR MaLR 343 406 -44 1709 106 69 22 chr10 52830899 52831173 -92758115 + AluSg SINE Alu 18 304 -6 733 283 65 37 chr10 52831261 52831538 -92757750 + L1ME4a LINE L1 5412 5680 -441 2350 91 0 7 chr10 52831538 52831834 -92757454 + AluSx SINE Alu 1 294 -18 733 283 65 37 chr10 52831834 52832144 -92757144 + L1ME4a LINE L1 5680 6026 -95 1348 140 33 0 chr10 52832236 52832450 -92756838 + L1MC1 LINE L1 6107 6327 -6 626 228 50 56 chr10 52832500 52832680 -92756608 - MLT1G1 LTR MaLR -414 181 3 23 0 0 0 chr10 52832680 52832703 -92756585 + AT_rich Low_complexity Low_complexity 1 23 0 380 262 113 20 chr10 52832803 52833051 -92756237 + L1M4 LINE L1 2131 2401 -3745 440 293 55 0 chr10 52833199 52833363 -92755925 + L1ME4a LINE L1 5949 6121 0 723 186 0 0 chr10 52833773 52833891 -92755397 + FLAM_C SINE Alu 1 118 -15 21 57 0 0 chr10 52833891 52833926 -92755362 + AT_rich Low_complexity Low_complexity 1 35 0 350 205 8 25 chr10 52834477 52834599 -92754689 + GA-rich Low_complexity Low_complexity 2 121 0 322 305 133 87 chr10 52835289 52835736 -92753552 + L2 LINE L2 2732 3208 -64 226 295 124 0 chr10 52836017 52836122 -92753166 + MIR3 SINE MIR 85 202 -6 1965 146 7 3 chr10 52836491 52836792 -92752496 + AluJo SINE Alu 1 302 -10 315 269 27 186 chr10 52837089 52837390 -92751898 + L2 LINE L2 3004 3256 -16 755 302 47 13 chr10 52837606 52837841 -92751447 - MIR SINE MIR -17 245 3 298 298 29 10 chr10 52838059 52838163 -92751125 - MIR SINE MIR -124 138 33 214 294 255 39 chr10 52838605 52838809 -92750479 - MIR SINE MIR -1 261 14 352 338 7 35 chr10 52839759 52839904 -92749384 - MIR SINE MIR -94 168 28 637 288 41 8 chr10 52840701 52840944 -92748344 + MER112 DNA MER1_type 9 259 -1 2707 93 11 11 chr10 52841899 52842274 -92747014 - THE1C LTR MaLR 0 375 1 542 343 50 16 chr10 52842345 52842587 -92746701 - MIR SINE MIR 0 262 13 574 300 112 35 chr10 52842611 52842898 -92746390 - L2 LINE L2 -78 3235 2927 1108 248 39 77 chr10 52842963 52843326 -92745962 + MLT1F LTR MaLR 194 542 0 953 88 29 0 chr10 52843543 52843680 -92745608 + L1MA2 LINE L1 6162 6302 -2 524 242 26 68 chr10 52843769 52843959 -92745329 + MER63A DNA MER1_type 29 210 0 906 281 9 4 chr10 52845271 52845499 -92743789 + MIR SINE MIR 2 230 -32 2151 126 7 0 chr10 52845560 52845861 -92743427 - AluSx SINE Alu -9 303 1 390 192 42 42 chr10 52846004 52846124 -92743164 + LTR33A LTR ERVL 402 521 -2 2144 208 145 10 chr10 52846566 52847062 -92742226 + MLT1F1 LTR MaLR 3 565 -2 391 281 118 0 chr10 52847212 52847347 -92741941 - MIR SINE MIR -108 154 4 795 220 52 0 chr10 52847843 52848034 -92741254 + MER3 DNA MER1_type 9 209 0 3480 54 7 5 chr10 52848535 52848982 -92740306 + L1PA7 LINE L1 5707 6154 0 563 298 25 6 chr10 52848982 52849140 -92740148 + MIR SINE MIR 21 181 -81 205 250 0 0 chr10 52849551 52849595 -92739693 + CT-rich Low_complexity Low_complexity 4 47 0 379 257 0 20 chr10 52849611 52849712 -92739576 - L1MC5 LINE L1 -52 7909 7811 206 194 145 16 chr10 52849818 52849880 -92739408 + MIR SINE MIR 179 248 -14 1986 136 57 46 chr10 52850853 52851222 -92738066 - MER83C LTR ERV1 0 373 1 326 236 0 14 chr10 52851679 52851751 -92737537 + Charlie8 DNA MER1_type 132 202 -2215 239 241 12 48 chr10 52851836 52851919 -92737369 + Charlie8 DNA MER1_type 2338 2417 0 329 247 21 0 chr10 52852978 52853075 -92736213 + (TA)n Simple_repeat Simple_repeat 1 99 0 619 270 78 25 chr10 52853107 52853311 -92735977 + MIR SINE MIR 19 233 -29 474 310 52 17 chr10 52853476 52853650 -92735638 - MIR3 SINE MIR -9 199 20 360 271 18 78 chr10 52853818 52853984 -92735304 + MIR SINE MIR 93 248 -14 2093 120 0 29 chr10 52854085 52854393 -92734895 - AluSx SINE Alu -13 299 1 437 250 123 48 chr10 52854739 52854991 -92734297 + MER102a DNA MER1_type 59 329 -1 462 293 24 68 chr10 52855666 52855871 -92733417 - MER117 DNA MER1_type 0 197 2 323 320 70 35 chr10 52856383 52856555 -92732733 + MIR SINE MIR 3 180 -82 599 316 18 26 chr10 52856969 52857197 -92732091 + MER102b DNA MER1_type 116 341 0 185 0 40 0 chr10 52858691 52858716 -92730572 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 323 216 174 63 chr10 52858917 52859204 -92730084 + L1ME4a LINE L1 5803 6121 0 2369 93 0 13 chr10 52860978 52861290 -92727998 + AluY SINE Alu 1 308 -3 1779 227 34 58 chr10 52861317 52861881 -92727407 + L1MC5 LINE L1 6688 7237 -724 524 262 41 36 chr10 52861953 52862174 -92727114 + L1MC5 LINE L1 7273 7494 -467 230 288 18 27 chr10 52862175 52862286 -92727002 + GA-rich Low_complexity Low_complexity 6 115 0 615 209 83 59 chr10 52862286 52862539 -92726749 + L1MC5 LINE L1 7475 7733 -228 213 247 0 0 chr10 52862587 52862668 -92726620 + (TGGA)n Simple_repeat Simple_repeat 4 84 0 458 259 44 25 chr10 52863030 52863188 -92726100 + LTR67 LTR ERVL 384 544 -13 24 0 0 0 chr10 52865789 52865813 -92723475 + AT_rich Low_complexity Low_complexity 1 24 0 667 266 30 71 chr10 52865815 52866082 -92723206 - MIR SINE MIR -6 256 1 2146 104 28 0 chr10 52866125 52866413 -92722875 - AluSq SINE Alu -9 304 9 185 263 53 0 chr10 52866516 52866573 -92722715 - MIR3 SINE MIR -16 192 133 486 252 93 90 chr10 52866623 52867000 -92722288 + MLT1I LTR MaLR 31 408 -1 1521 205 0 21 chr10 52868625 52868913 -92720375 + AluJo SINE Alu 1 282 -30 233 29 0 29 chr10 52868922 52868957 -92720331 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 19804 65 2 0 chr10 52869335 52871815 -92717473 + L1PA4 LINE L1 14 2496 -3650 260 109 0 22 chr10 52871968 52872014 -92717274 + (GAAAA)n Simple_repeat Simple_repeat 5 49 0 25255 37 11 0 chr10 52874272 52877930 -92711358 + L1PA4 LINE L1 2484 6151 -4 602 258 66 28 chr10 52878011 52878193 -92711095 - Charlie8 DNA MER1_type -2147 270 82 293 292 83 0 chr10 52878287 52878383 -92710905 - L2 LINE L2 0 3313 3210 1913 229 76 26 chr10 52878550 52879052 -92710236 - MLT1H LTR MaLR -10 539 13 217 380 110 25 chr10 52879391 52879591 -92709697 - L2 LINE L2 -181 3091 2875 563 270 103 0 chr10 52881026 52881200 -92708088 + MIR SINE MIR 16 207 -55 956 168 66 41 chr10 52881672 52881691 -92707597 + AluJb SINE Alu 101 118 -194 224 29 0 29 chr10 52881691 52881725 -92707563 + (TAA)n Simple_repeat Simple_repeat 2 34 0 956 168 66 41 chr10 52881725 52881902 -92707386 + AluJb SINE Alu 118 302 -10 801 286 35 0 chr10 52882173 52882376 -92706912 + MER63A DNA MER1_type 1 210 0 215 309 178 5 chr10 52883820 52883945 -92705343 - MIR3 SINE MIR -54 154 34 355 194 58 101 chr10 52884394 52884533 -92704755 - Charlie2a DNA MER1_type -31 2831 2699 * 416 318 31 10 chr10 52884521 52884713 -92704575 - Charlie2a DNA MER1_type -1200 1662 1467 301 225 180 45 chr10 52884762 52884873 -92704415 - Charlie2b DNA MER1_type -2095 687 562 367 333 122 39 chr10 52884881 52885136 -92704152 - Charlie2b DNA MER1_type -2474 308 33 207 0 0 0 chr10 52885257 52885280 -92704008 + (T)n Simple_repeat Simple_repeat 1 23 0 474 296 168 21 chr10 52887779 52888059 -92701229 + MLT1J1 LTR MaLR 1 321 -125 425 179 179 9 chr10 52888064 52888170 -92701118 + Charlie2 DNA MER1_type 2738 2861 -1 2368 156 54 15 chr10 52888200 52888610 -92700678 - MSTB LTR MaLR 0 426 1 558 198 74 8 chr10 52888717 52888838 -92700450 - FRAM SINE Alu -10 166 38 1983 268 50 8 chr10 52888963 52889485 -92699803 + MLT1H1 LTR MaLR 12 555 0 181 231 51 0 chr10 52889656 52889695 -92699593 + L2 LINE L2 3263 3303 -10 1249 300 103 33 chr10 52889850 52890746 -92698542 - L2 LINE L2 0 3313 2360 377 226 9 9 chr10 52890980 52891086 -92698202 - MER113 DNA MER1_type? -415 106 1 344 252 54 45 chr10 52891691 52891802 -92697486 - MIR SINE MIR -87 175 64 310 284 10 20 chr10 52892086 52892188 -92697100 - L1M4 LINE L1 -2536 3610 3510 431 246 139 8 chr10 52892246 52892368 -92696920 + L1ME3A LINE L1 6033 6170 0 568 211 39 2 chr10 52892408 52892546 -92696742 - MLT1L LTR MaLR -43 567 399 1106 206 101 132 chr10 52892646 52893018 -92696270 + L1ME2 LINE L1 5567 5914 -250 195 100 0 0 chr10 52893018 52893048 -92696240 + (CA)n Simple_repeat Simple_repeat 1 30 0 1106 206 101 132 chr10 52893048 52893282 -92696006 + L1ME2 LINE L1 5914 6154 -10 205 325 36 12 chr10 52895481 52895564 -92693724 - MIR SINE MIR -103 105 21 2334 156 19 3 chr10 52896042 52896402 -92692886 - MER47A DNA MER2_type 0 366 1 209 219 292 21 chr10 52898192 52898288 -92691000 + L2 LINE L2 3191 3312 -1 371 174 29 0 chr10 52900024 52900093 -92689195 - MER103 DNA DNA -44 122 52 773 249 53 29 chr10 52900382 52900627 -92688661 + L1MCb LINE L1 3 253 -5792 234 173 58 0 chr10 52900777 52900829 -92688459 + L1MCb LINE L1 574 628 -5417 13088 176 46 11 chr10 52900835 52903222 -92686066 + L1MA4A LINE L1 7 2476 -4373 3562 22 0 49 chr10 52903216 52903668 -92685620 - L1PA3 LINE L1 -1027 5119 4690 * 7671 25 5 0 chr10 52903666 52904709 -92684579 + L1PA3 LINE L1 5109 6155 0 11868 184 61 14 chr10 52904734 52905161 -92684127 + L1MA4A LINE L1 2449 2854 -3994 2581 60 0 0 chr10 52905161 52905462 -92683826 + AluY SINE Alu 1 301 -10 11868 184 61 14 chr10 52905462 52908349 -92680939 + L1MA4A LINE L1 2854 5921 -927 477 156 0 10 chr10 52908349 52908445 -92680843 + L1MA4A LINE L1 5874 5968 -880 694 95 36 22 chr10 52908545 52908682 -92680606 + L1MA4A LINE L1 5976 6114 -891 3542 130 89 6 chr10 52908710 52909363 -92679925 + L1MA4A LINE L1 6295 7001 -4 519 224 34 34 chr10 52909369 52909548 -92679740 + L1MCb LINE L1 614 792 -5253 1978 191 83 5 chr10 52909566 52910299 -92678989 + L1MCb LINE L1 1164 2139 -4425 804 199 175 15 chr10 52910313 52910645 -92678643 + L1MCb LINE L1 2195 2579 -3985 484 271 70 20 chr10 52911122 52911293 -92677995 + MIR SINE MIR 35 213 -49 1723 185 17 0 chr10 52911791 52912089 -92677199 - AluJb SINE Alu -9 303 1 626 254 48 92 chr10 52915948 52916263 -92673025 - L2 LINE L2 -2 3311 3011 351 230 71 71 chr10 52916339 52916465 -92672823 - MIR SINE MIR -74 188 63 343 309 132 32 chr10 52916831 52917209 -92672079 + L2 LINE L2 2467 2882 -432 236 284 147 17 chr10 52917798 52917914 -92671374 + L2 LINE L2 3137 3267 -5 23 0 0 0 chr10 52919351 52919374 -92669914 + AT_rich Low_complexity Low_complexity 1 23 0 1653 262 107 57 chr10 52919401 52920407 -92668881 + HAL1 LINE L1 1317 2373 -134 315 303 84 42 chr10 52920423 52920565 -92668723 + HAL1 LINE L1 2343 2490 -17 366 279 73 7 chr10 52921348 52921484 -92667804 + MIR SINE MIR 7 151 -111 352 286 7 14 chr10 52921551 52921672 -92667616 + L1ME LINE L1 5609 5730 -391 1755 171 52 0 chr10 52921672 52921958 -92667330 + AluJo SINE Alu 1 301 -11 352 286 7 14 chr10 52921958 52921976 -92667312 + L1ME LINE L1 5730 5747 -374 198 330 70 10 chr10 52921995 52922095 -92667193 + MER5A DNA MER1_type 10 115 -74 428 326 41 84 chr10 52922354 52922698 -92666590 - L1MDa LINE L1 -6191 349 21 192 263 0 0 chr10 52923410 52923448 -92665840 - MIR SINE MIR -133 75 38 2009 109 13 26 chr10 52924813 52925124 -92664164 - AluSx SINE Alu -5 307 1 271 263 18 0 chr10 52925323 52925380 -92663908 + MIR SINE MIR 86 143 -65 180 0 0 0 chr10 52926180 52926200 -92663088 + (A)n Simple_repeat Simple_repeat 1 20 0 1372 273 136 23 chr10 52926211 52927033 -92662255 - L1MC4 LINE L1 0 8042 7128 282 303 131 64 chr10 52927474 52928068 -92661220 + L2 LINE L2 2641 3256 -16 208 320 0 23 chr10 52928471 52928599 -92660689 + A-rich Low_complexity Low_complexity 1 125 0 2911 3 0 0 chr10 52929569 52929882 -92659406 + AluYb8 SINE Alu 1 313 -5 413 282 40 13 chr10 52930532 52930681 -92658607 + L2 LINE L2 2186 2338 -976 223 344 133 0 chr10 52930955 52931045 -92658243 + L2 LINE L2 3163 3264 -8 264 222 137 9 chr10 52931185 52931290 -92657998 - MIR SINE MIR -35 173 58 559 284 91 35 chr10 52931723 52932262 -92657026 + L1MC5 LINE L1 7310 7878 -83 216 188 0 0 chr10 52933165 52933213 -92656075 + A-rich Low_complexity Low_complexity 1 48 0 204 250 0 0 chr10 52935116 52935164 -92654124 + (TA)n Simple_repeat Simple_repeat 2 49 0 22 0 0 0 chr10 52935554 52935576 -92653712 + AT_rich Low_complexity Low_complexity 1 22 0 1814 160 19 19 chr10 52937190 52937312 -92651976 + AluJo SINE Alu 1 122 -190 253 0 54 0 chr10 52937312 52937349 -92651939 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1814 160 19 19 chr10 52937349 52937538 -92651750 + AluJo SINE Alu 121 312 0 182 430 0 0 chr10 52937903 52938003 -92651285 + MIR SINE MIR 47 146 -62 283 294 47 0 chr10 52938257 52938342 -92650946 - MIR SINE MIR -71 191 103 518 304 75 73 chr10 52938643 52938707 -92650581 + L2 LINE L2 2601 2663 -650 1299 141 212 29 chr10 52938707 52939013 -92650275 + MLT1A1 LTR MaLR 1 362 -3 518 304 75 73 chr10 52939013 52939435 -92649853 + L2 LINE L2 2663 3106 -207 1758 147 0 11 chr10 52939630 52939903 -92649385 - AluJb SINE Alu -1 311 42 367 317 73 12 chr10 52940931 52941095 -92648193 - MIR SINE MIR -69 193 20 194 295 9 0 chr10 52941320 52941425 -92647863 + (TATG)n Simple_repeat Simple_repeat 2 107 0 491 276 79 53 chr10 52941713 52941941 -92647347 - L2 LINE L2 -43 3270 3037 201 329 12 24 chr10 52942015 52942100 -92647188 - L2 LINE L2 -478 2836 2753 186 239 268 0 chr10 52942130 52942201 -92647087 - L2 LINE L2 -666 2648 2559 547 200 16 56 chr10 52942201 52942326 -92646962 + FRAM SINE Alu 42 161 -15 501 303 71 24 chr10 52942394 52942605 -92646683 - MIR SINE MIR -34 228 8 21 0 0 0 chr10 52943592 52943613 -92645675 + AT_rich Low_complexity Low_complexity 1 21 0 336 282 81 8 chr10 52943770 52943894 -92645394 + MIR SINE MIR 81 213 -49 805 249 155 74 chr10 52945716 52945763 -92643525 + L2 LINE L2 2580 2622 -691 2192 99 24 0 chr10 52945763 52946056 -92643232 - AluSp SINE Alu -13 300 1 805 249 155 74 chr10 52946056 52946700 -92642588 + L2 LINE L2 2622 3313 0 303 303 92 28 chr10 52946710 52946819 -92642469 - L2 LINE L2 -25 3247 3132 191 318 47 28 chr10 52948599 52948706 -92640582 - MIR3 SINE MIR -41 167 59 2385 51 3 10 chr10 52951606 52951901 -92637387 + AluY SINE Alu 1 293 -18 27 29 0 0 chr10 52952124 52952158 -92637130 + AT_rich Low_complexity Low_complexity 1 34 0 353 289 70 23 chr10 52952331 52952459 -92636829 - MIR3 SINE MIR -48 160 27 1271 137 48 13 chr10 52952632 52952859 -92636429 + MER46A DNA MER2_type 1 235 -1 308 263 173 23 chr10 52952873 52953006 -92636282 + L1ME4a LINE L1 5967 6119 -2 323 281 0 58 chr10 52953145 52953266 -92636022 + MIR SINE MIR 114 227 -35 313 272 147 0 chr10 52953528 52953664 -92635624 - MER103 DNA DNA -6 160 5 1065 192 5 39 chr10 52953736 52953944 -92635344 - AluJo SINE Alu -29 283 83 2146 89 58 0 chr10 52954883 52955196 -92634092 - L1PA8 LINE L1 -3 6169 5839 5405 95 1 5 chr10 52955196 52955995 -92633293 + L1P LINE L1 4005 4800 -1346 2213 117 19 33 chr10 52956551 52956911 -92632377 + THE1A LTR MaLR 1 355 0 11473 94 10 5 chr10 52956911 52958482 -92630806 + THE1A-int LTR MaLR 1 1580 0 2334 123 14 3 chr10 52958482 52958833 -92630455 + THE1A LTR MaLR 1 355 0 16504 30 0 1 chr10 52959793 52962292 -92626996 + L1P2 LINE L1 3326 5822 -333 9505 72 49 14 chr10 52962292 52963604 -92625684 + SVA Other Other 29 1385 -1 226 70 70 0 chr10 52963604 52963647 -92625641 + L1MB7 LINE L1 6139 6184 0 31 0 0 0 chr10 52963725 52963756 -92625532 + AT_rich Low_complexity Low_complexity 1 31 0 2755 37 3 20 chr10 52963756 52964105 -92625183 + L1PA4 LINE L1 5812 6154 -1 23 54 0 0 chr10 52964358 52964395 -92624893 + AT_rich Low_complexity Low_complexity 1 37 0 25 31 0 0 chr10 52964791 52964823 -92624465 + AT_rich Low_complexity Low_complexity 1 32 0 689 198 0 0 chr10 52965018 52965134 -92624154 + FLAM_C SINE Alu 3 118 -15 24 67 0 0 chr10 52965134 52965179 -92624109 + AT_rich Low_complexity Low_complexity 1 45 0 1517 162 81 26 chr10 52965450 52965721 -92623567 + AluSx SINE Alu 4 289 -23 326 230 97 92 chr10 52966833 52967029 -92622259 + L1ME4a LINE L1 5919 6115 -6 182 189 54 0 chr10 52968989 52969026 -92620262 + L2 LINE L2 2936 2974 -340 186 319 66 33 chr10 52969040 52969131 -92620157 + L2 LINE L2 3220 3313 0 352 390 42 25 chr10 52969190 52969426 -92619862 + L1MEd LINE L1 55 294 -5825 22 35 0 0 chr10 52969549 52969578 -92619710 + AT_rich Low_complexity Low_complexity 1 29 0 345 296 0 32 chr10 52969609 52969734 -92619554 + L1MEd LINE L1 651 771 -5348 1542 247 157 65 chr10 52970129 52971364 -92617924 + HAL1 LINE L1 25 1373 -1134 2148 111 37 0 chr10 52972000 52972297 -92616991 + AluSx SINE Alu 1 308 -4 3846 92 13 7 chr10 52972431 52972988 -92616300 - L1PA8 LINE L1 -1 6171 5612 5327 43 47 97 chr10 52973062 52973283 -92616005 + L1PA7 LINE L1 5106 5336 -818 5327 73 0 6 chr10 52973283 52973983 -92615305 + L1PA7 LINE L1 5456 6151 -3 5327 43 47 97 chr10 52973983 52974128 -92615160 + L1PA7 LINE L1 5336 6151 -3 183 122 49 98 chr10 52974180 52974221 -92615067 + L2 LINE L2 2744 2782 -532 2271 110 3 0 chr10 52975365 52975674 -92613614 - AluSx SINE Alu -2 310 1 1918 187 0 0 chr10 52976234 52976539 -92612749 + AluJb SINE Alu 1 305 -7 299 190 50 50 chr10 52976612 52976712 -92612576 + L1MC/D LINE L1 5383 5482 -639 440 350 123 9 chr10 52976746 52976792 -92612496 + L2 LINE L2 2507 2546 -767 6836 139 31 13 chr10 52976792 52977478 -92611810 - Tigger3b DNA MER2_type -1797 1231 513 2311 108 0 0 chr10 52977478 52977775 -92611513 + AluSc SINE Alu 1 297 -12 6836 139 31 13 chr10 52977775 52978297 -92610991 - Tigger3b DNA MER2_type -2515 513 2 440 350 123 9 chr10 52978297 52978759 -92610529 + L2 LINE L2 2546 3080 -233 784 198 67 18 chr10 52978777 52979047 -92610241 - MSTD LTR MaLR -86 310 1 518 277 26 7 chr10 52979054 52979209 -92610079 + L2 LINE L2 3151 3308 -5 21 0 0 0 chr10 52979380 52979401 -92609887 + AT_rich Low_complexity Low_complexity 1 21 0 2267 84 3 7 chr10 52979428 52979726 -92609562 + AluY SINE Alu 1 297 -14 269 245 38 0 chr10 52981192 52981257 -92608031 - L2 LINE L2 -14 3258 3210 753 204 224 117 chr10 52981287 52981934 -92607354 + L2 LINE L2 2338 3058 -255 754 202 0 0 chr10 52982889 52983013 -92606275 - FLAM_A SINE Alu -9 124 1 3646 45 0 5 chr10 52983453 52983899 -92605389 - L1PA5 LINE L1 -5 6149 5706 1716 205 35 37 chr10 52984072 52984501 -92604787 - MSTC LTR MaLR 0 428 1 1035 212 156 25 chr10 52984662 52985021 -92604267 - MLT1D LTR MaLR -3 502 97 249 263 0 0 chr10 52985671 52985728 -92603560 + L2 LINE L2 3257 3313 0 254 327 97 29 chr10 52986107 52986385 -92602903 + L1MC/D LINE L1 5550 5846 -1962 198 71 0 0 chr10 52986447 52986475 -92602813 + (TA)n Simple_repeat Simple_repeat 2 29 0 2103 141 7 0 chr10 52987116 52987413 -92601875 + AluSx SINE Alu 1 299 -13 269 148 0 99 chr10 52987724 52987805 -92601483 + MER113 DNA MER1_type? 46 118 -403 1629 206 7 3 chr10 52987854 52988146 -92601142 - AluJb SINE Alu -19 293 1 207 0 0 0 chr10 52988163 52988186 -92601102 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 219 139 0 0 chr10 52988282 52988318 -92600970 + (A)n Simple_repeat Simple_repeat 1 36 0 369 43 0 0 chr10 52989564 52989611 -92599677 + (CA)n Simple_repeat Simple_repeat 2 48 0 247 208 38 0 chr10 52990156 52990209 -92599079 - MIR SINE MIR -111 151 97 1256 196 75 4 chr10 52990941 52991207 -92598081 + MLT1A1 LTR MaLR 81 365 0 194 267 50 17 chr10 52991273 52991333 -92597955 + MIR SINE MIR 83 144 -64 393 217 17 8 chr10 52991378 52991498 -92597790 + CT-rich Low_complexity Low_complexity 1 121 0 1026 195 0 10 chr10 52991572 52991767 -92597521 - AluJo SINE Alu -119 193 1 1639 231 80 12 chr10 52991770 52992273 -92597015 - L1MC4a LINE L1 0 7808 7272 341 331 48 65 chr10 52992341 52992589 -92596699 + MIR SINE MIR 5 248 -14 233 303 165 21 chr10 52993853 52994041 -92595247 - MIR SINE MIR -1 261 47 214 234 0 0 chr10 52994530 52994577 -92594711 + (CAGA)n Simple_repeat Simple_repeat 4 50 0 260 162 50 71 chr10 52994655 52994702 -92594586 + L1MC4a LINE L1 5866 5912 -1896 2562 131 15 0 chr10 52994702 52995099 -92594189 - MER57A LTR ERV1 0 403 1 260 162 50 71 chr10 52995099 52995150 -92594138 + L1MC4a LINE L1 5912 5962 -1846 1445 157 119 39 chr10 52995369 52995655 -92593633 + AluSx SINE Alu 1 309 -3 197 328 17 0 chr10 52995660 52995718 -92593570 + L2 LINE L2 3254 3312 -1 442 272 80 24 chr10 52995921 52996134 -92593154 + L1MA9 LINE L1 6050 6274 -38 180 354 83 0 chr10 52996471 52996567 -92592721 - MIR3 SINE MIR -49 159 56 21 0 0 0 chr10 52996830 52996851 -92592437 + AT_rich Low_complexity Low_complexity 1 21 0 880 179 0 54 chr10 52997501 52997669 -92591619 + FRAM SINE Alu 1 158 -18 5355 110 6 18 chr10 52998392 52999221 -92590067 + L1PA15 LINE L1 5347 6165 0 289 218 55 85 chr10 52999750 52999915 -92589373 + L1MC5 LINE L1 7744 7903 -58 189 261 58 72 chr10 53000669 53000738 -92588550 + L3 LINE CR1 1413 1480 -97 299 274 148 15 chr10 53003598 53003733 -92585555 + MIR SINE MIR 91 243 -19 32 0 0 0 chr10 53005434 53005466 -92583822 + AT_rich Low_complexity Low_complexity 1 32 0 28 0 0 0 chr10 53005809 53005837 -92583451 + AT_rich Low_complexity Low_complexity 1 28 0 608 228 19 48 chr10 53005956 53006162 -92583126 + L1MB8 LINE L1 5921 6120 -58 367 270 50 85 chr10 53006401 53006719 -92582569 + L1ME4a LINE L1 5719 6025 -96 2421 71 0 3 chr10 53006763 53007060 -92582228 + AluY SINE Alu 1 296 -15 749 284 52 5 chr10 53007202 53007413 -92581875 + MIR SINE MIR 7 227 -35 513 0 0 0 chr10 53007413 53007470 -92581818 + (TA)n Simple_repeat Simple_repeat 2 58 0 1018 158 28 60 chr10 53007474 53007689 -92581599 - AluJo SINE Alu -22 290 83 366 273 211 19 chr10 53008326 53008535 -92580753 - MIR SINE MIR 0 262 14 219 222 0 0 chr10 53008969 53009014 -92580274 + CT-rich Low_complexity Low_complexity 1 45 0 1262 140 27 35 chr10 53009288 53009545 -92579743 - Tigger3(Golem) DNA MER2_type 0 3029 2775 200 202 11 43 chr10 53010664 53010758 -92578530 + C-rich Low_complexity Low_complexity 2 92 0 446 280 160 53 chr10 53010765 53011269 -92578019 - L1M2 LINE L1 -5621 1228 676 2045 122 44 0 chr10 53012643 53012962 -92576326 - L1PB3 LINE L1 0 6154 5822 240 278 139 0 chr10 53013425 53013497 -92575791 - L2 LINE L2 0 3313 3232 189 94 0 0 chr10 53014194 53014226 -92575062 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 1421 196 25 7 chr10 53014239 53014514 -92574774 + AluJo SINE Alu 14 293 -19 393 332 34 45 chr10 53014523 53014878 -92574410 + L1MC4a LINE L1 5559 5909 -1899 186 189 0 0 chr10 53015932 53015969 -92573319 + (CATATA)n Simple_repeat Simple_repeat 2 38 0 841 185 17 28 chr10 53016033 53016211 -92573077 + LTR41 LTR ERVL 1 176 -597 1265 226 30 89 chr10 53016246 53016617 -92572671 + LTR41 LTR ERVL 349 692 -81 1622 189 0 44 chr10 53016617 53016934 -92572354 - AluJo SINE Alu -9 303 1 1265 226 30 89 chr10 53016934 53017001 -92572287 + LTR41 LTR ERVL 692 761 -12 709 180 192 12 chr10 53017904 53018076 -92571212 + MER3 DNA MER1_type 1 203 -6 1060 135 23 222 chr10 53018239 53018403 -92570885 + AluJo SINE Alu 4 61 -240 1596 103 0 5 chr10 53018403 53018607 -92570681 + AluSg/x SINE Alu 89 291 -21 1060 135 23 222 chr10 53018607 53018809 -92570479 + AluJo SINE Alu 61 301 0 1518 126 40 18 chr10 53019022 53019300 -92569988 - L1MA4A LINE L1 -1 6302 6019 25 31 0 0 chr10 53022902 53022934 -92566354 + AT_rich Low_complexity Low_complexity 1 32 0 375 248 215 25 chr10 53023042 53023214 -92566074 - MIR SINE MIR -32 230 27 1061 185 9 22 chr10 53023423 53023645 -92565643 - MER20 DNA MER1_type 0 219 1 23 0 0 0 chr10 53023894 53023917 -92565371 + AT_rich Low_complexity Low_complexity 1 23 0 1478 187 58 22 chr10 53024033 53024311 -92564977 + AluJo SINE Alu 1 288 -24 593 204 25 70 chr10 53024450 53024607 -92564681 - MIR SINE MIR -26 236 87 250 373 87 13 chr10 53024751 53024901 -92564387 - L3 LINE CR1 -974 603 443 1172 61 0 0 chr10 53024903 53025050 -92564238 + AluY SINE Alu 149 295 -16 610 346 101 22 chr10 53025052 53025419 -92563869 - L3 LINE CR1 -1125 452 57 488 290 55 0 chr10 53026198 53026343 -92562945 + MIR SINE MIR 76 228 -34 189 0 0 0 chr10 53026753 53026774 -92562514 + (A)n Simple_repeat Simple_repeat 1 21 0 342 0 0 0 chr10 53027329 53027367 -92561921 + (TAAAA)n Simple_repeat Simple_repeat 2 39 0 300 274 247 16 chr10 53028660 53028780 -92560508 + MIR SINE MIR 20 111 -151 1175 149 88 58 chr10 53028780 53029109 -92560179 + MER44D DNA MER2_type 1 609 0 300 274 247 16 chr10 53029109 53029178 -92560110 + MIR SINE MIR 111 253 -9 207 365 0 0 chr10 53029271 53029345 -92559943 - MIR3 SINE MIR -15 193 120 251 283 85 28 chr10 53029845 53029951 -92559337 + MIR3 SINE MIR 4 115 -93 1161 200 73 27 chr10 53031238 53031634 -92557654 - MER54B LTR ERVL -2 791 477 225 339 90 17 chr10 53033821 53033998 -92555290 - MIR SINE MIR -12 250 61 5554 107 20 36 chr10 53034382 53034674 -92554614 + L1PA16 LINE L1 5047 5342 -824 1451 75 0 0 chr10 53034674 53034847 -92554441 + AluSp SINE Alu 130 302 -11 5554 107 20 36 chr10 53034847 53035668 -92553620 + L1PA16 LINE L1 5342 6157 -9 306 270 51 7 chr10 53035847 53035984 -92553304 + L1MC/D LINE L1 5664 5806 -2002 239 185 37 37 chr10 53036100 53036181 -92553107 + HAL1b LINE L1 1268 1348 0 2218 90 0 3 chr10 53037032 53037332 -92551956 + AluY SINE Alu 1 299 -12 270 81 0 0 chr10 53037903 53037940 -92551348 + (TG)n Simple_repeat Simple_repeat 2 38 0 557 276 47 54 chr10 53037991 53038288 -92551000 - MLT1I LTR MaLR -8 401 107 1832 163 70 3 chr10 53038732 53039075 -92550213 - MER47A DNA MER2_type 0 366 1 1686 157 62 9 chr10 53039105 53039429 -92549859 + MER7A DNA MER2_type 2 340 -6 462 36 0 0 chr10 53039604 53039660 -92549628 + (CA)n Simple_repeat Simple_repeat 2 57 0 252 269 111 14 chr10 53040099 53040307 -92548981 + L1ME LINE L1 5671 5898 -223 1555 195 44 16 chr10 53042063 53042427 -92546861 - MER63 DNA MER1_type -1 1061 688 314 267 199 19 chr10 53042602 53042808 -92546480 - MIR SINE MIR -13 249 7 2298 75 3 30 chr10 53044510 53044815 -92544473 + AluY SINE Alu 1 297 -14 465 315 99 0 chr10 53045065 53045246 -92544042 + MIR SINE MIR 51 249 -13 210 37 0 0 chr10 53045667 53045694 -92543594 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 263 244 151 58 chr10 53045720 53045892 -92543396 + MARNA DNA Mariner 39 226 -360 289 188 16 0 chr10 53045941 53046005 -92543283 + MARNA DNA Mariner 323 387 -199 2189 53 0 11 chr10 53046028 53046290 -92542998 - AluY SINE Alu -20 291 33 565 278 32 16 chr10 53046852 53047039 -92542249 + MIR SINE MIR 64 253 -9 584 219 17 34 chr10 53047315 53047434 -92541854 - MIR SINE MIR -145 117 1 985 243 108 17 chr10 53048065 53048581 -92540707 + MLT1E LTR MaLR 10 593 0 377 262 24 16 chr10 53049272 53049398 -92539890 - MIR3 SINE MIR -1 207 81 192 305 17 0 chr10 53049813 53049872 -92539416 - L2 LINE L2 -4 3309 3250 32 26 0 0 chr10 53050181 53050220 -92539068 + AT_rich Low_complexity Low_complexity 1 39 0 1637 152 17 42 chr10 53050536 53050825 -92538463 - AluJo SINE Alu -30 282 1 375 274 18 9 chr10 53050826 53050939 -92538349 - MIR SINE MIR -38 224 111 339 111 37 0 chr10 53051972 53052026 -92537262 - L1PA7 LINE L1 -3 6151 6096 216 0 0 0 chr10 53052037 53052061 -92537227 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3821 89 9 2 chr10 53052100 53052638 -92536650 - L1PA13 LINE L1 -1 6162 5621 1169 164 0 0 chr10 53052644 53052863 -92536425 - L1PA13 LINE L1 -857 5289 5071 343 370 39 20 chr10 53053087 53053268 -92536020 - MIR SINE MIR -62 146 8 1386 263 88 41 chr10 53053274 53054179 -92535109 + L1ME2 LINE L1 1428 2375 -4021 293 170 56 11 chr10 53054200 53054301 -92534987 + L1ME2 LINE L1 3713 3817 -2398 * 1619 227 80 48 chr10 53054289 53054525 -92534763 + L1ME2 LINE L1 4829 5056 -1177 655 236 0 0 chr10 53054525 53054652 -92534636 + FLAM_A SINE Alu 1 127 -6 1619 227 80 48 chr10 53054652 53055319 -92533969 + L1ME2 LINE L1 5056 5792 -441 6737 115 25 16 chr10 53055319 53056380 -92532908 + MER11C LTR ERVK 1 1071 0 1619 227 80 48 chr10 53056380 53056715 -92532573 + L1ME2 LINE L1 5792 6115 -118 239 368 96 0 chr10 53057147 53057272 -92532016 - L2 LINE L2 -2 3270 3134 24 32 0 0 chr10 53057441 53057472 -92531816 + AT_rich Low_complexity Low_complexity 1 31 0 1177 145 36 0 chr10 53057542 53057763 -92531525 - L1MA8 LINE L1 -5 6286 6058 809 139 0 31 chr10 53058047 53058176 -92531112 + AluJb SINE Alu 167 291 -21 566 213 127 0 chr10 53058179 53058366 -92530922 - Charlie1b DNA MER1_type -205 318 101 2395 91 10 0 chr10 53058378 53058686 -92530602 + AluSp SINE Alu 1 311 -2 1108 155 16 1 chr10 53058693 53058946 -92530342 + L1MC/D LINE L1 5209 5465 -745 350 272 33 147 chr10 53059404 53059546 -92529742 + L2 LINE L2 2928 3085 -228 243 88 0 0 chr10 53059546 53059580 -92529708 + (TG)n Simple_repeat Simple_repeat 2 35 0 350 272 33 147 chr10 53059580 53059867 -92529421 + L2 LINE L2 3085 3308 -5 22 70 0 0 chr10 53060748 53060791 -92528497 + AT_rich Low_complexity Low_complexity 1 43 0 22 35 0 0 chr10 53061000 53061029 -92528259 + AT_rich Low_complexity Low_complexity 1 29 0 21 71 0 0 chr10 53062051 53062093 -92527195 + AT_rich Low_complexity Low_complexity 1 42 0 1012 251 69 123 chr10 53062593 53063328 -92525960 + L1MEd LINE L1 269 933 -5186 225 0 0 0 chr10 53063328 53063353 -92525935 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 1012 251 69 123 chr10 53063353 53063659 -92525629 + L1MEd LINE L1 933 1254 -4865 835 112 6 25 chr10 53063663 53063824 -92525464 + (GGGA)n Simple_repeat Simple_repeat 3 160 0 231 114 0 0 chr10 53063966 53064001 -92525287 + (A)n Simple_repeat Simple_repeat 1 35 0 216 302 33 71 chr10 53064035 53064217 -92525071 - L2 LINE L2 -414 2900 2726 357 287 7 81 chr10 53064935 53065071 -92524217 + L2 LINE L2 3185 3310 -3 225 189 122 27 chr10 53065089 53065163 -92524125 - MER91C DNA MER1_type -31 109 29 270 202 161 32 chr10 53067164 53067288 -92522000 + L1ME4a LINE L1 5944 6083 -38 2064 145 34 0 chr10 53067330 53067688 -92521600 - L1PA16 LINE L1 0 6166 5797 2549 57 0 13 chr10 53068259 53068574 -92520714 - AluY SINE Alu 0 311 1 21 71 0 0 chr10 53069175 53069217 -92520071 + AT_rich Low_complexity Low_complexity 1 42 0 2497 58 0 0 chr10 53069327 53069619 -92519669 - AluSq SINE Alu -21 292 1 366 268 25 8 chr10 53069695 53069815 -92519473 + MIR SINE MIR 41 166 -42 1267 174 10 0 chr10 53071978 53072185 -92517103 + AluJo SINE Alu 84 292 -20 342 316 51 0 chr10 53072573 53072690 -92516598 + HAL1 LINE L1 8 130 -2377 4652 163 32 23 chr10 53072904 53074110 -92515178 + L1MB2 LINE L1 4957 6171 0 1182 174 66 54 chr10 53074114 53074359 -92514929 + MLT1D LTR MaLR 127 378 -127 2013 124 7 3 chr10 53074359 53074649 -92514639 - AluSx SINE Alu -21 291 1 1182 174 66 54 chr10 53074649 53074720 -92514568 + MLT1D LTR MaLR 378 447 -58 216 244 0 0 chr10 53074720 53074761 -92514527 + polypurine Low_complexity Low_complexity 2 42 0 1129 284 104 43 chr10 53074761 53075686 -92513602 + HAL1 LINE L1 364 1344 -1163 266 237 17 51 chr10 53075706 53075824 -92513464 + HAL1 LINE L1 1399 1512 -995 305 320 66 49 chr10 53075853 53076219 -92513069 + HAL1 LINE L1 2136 2507 0 261 139 0 0 chr10 53076230 53076273 -92513015 + (GGAA)n Simple_repeat Simple_repeat 3 45 0 226 254 0 0 chr10 53077557 53077616 -92511672 - L1ME3A LINE L1 -175 5995 5937 210 289 86 31 chr10 53078030 53078158 -92511130 - MIR SINE MIR -57 205 71 230 155 14 113 chr10 53078921 53078992 -92510296 - MIR SINE MIR -115 147 84 246 242 0 0 chr10 53079976 53080038 -92509250 + MER117 DNA MER1_type 136 197 0 202 217 100 17 chr10 53081377 53081437 -92507851 - MIR SINE MIR -35 227 163 3268 165 84 24 chr10 53081998 53082737 -92506551 - L1MA7 LINE L1 0 6291 5509 22 0 0 0 chr10 53083212 53083234 -92506054 + AT_rich Low_complexity Low_complexity 1 22 0 330 26 0 0 chr10 53084644 53084683 -92504605 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 522 247 111 42 chr10 53085046 53085363 -92503925 + LTR37B LTR ERV1 124 468 0 2012 137 119 10 chr10 53085489 53085875 -92503413 + MSTA LTR MaLR 1 428 0 1889 131 0 74 chr10 53085888 53086200 -92503088 + AluSx SINE Alu 5 293 -19 377 121 0 15 chr10 53086200 53086266 -92503022 + (GGGAA)n Simple_repeat Simple_repeat 1 65 0 709 105 0 0 chr10 53086279 53086384 -92502904 + MSTA-int LTR MaLR 19 123 -1457 6322 156 8 14 chr10 53086389 53087496 -92501792 + MSTA-int LTR MaLR 480 1580 0 2052 139 108 8 chr10 53087496 53087885 -92501403 + MSTA LTR MaLR 1 428 0 308 297 47 20 chr10 53089499 53089647 -92499641 - L1ME4a LINE L1 -4 6117 5966 21 0 0 0 chr10 53089684 53089705 -92499583 + AT_rich Low_complexity Low_complexity 1 21 0 22821 164 33 30 chr10 53090277 53092991 -92496297 + L1PA10 LINE L1 23 2728 -3755 2250 122 0 0 chr10 53092991 53093295 -92495993 - AluSx SINE Alu -8 304 1 22821 164 33 30 chr10 53093295 53095535 -92493753 + L1PA10 LINE L1 2728 5081 -1402 2121 146 0 0 chr10 53095535 53095843 -92493445 + AluSx SINE Alu 3 310 -2 22821 164 33 30 chr10 53095843 53097099 -92492189 + L1PA10 LINE L1 5081 6332 -151 2322 83 9 0 chr10 53097099 53097421 -92491867 + L1PA10 LINE L1 5841 6167 -1 27 0 0 0 chr10 53097438 53097465 -92491823 + AT_rich Low_complexity Low_complexity 1 27 0 1981 149 0 3 chr10 53097883 53098230 -92491058 - AluSx SINE Alu 0 312 1 2358 110 0 0 chr10 53099609 53099919 -92489369 + AluSg SINE Alu 1 310 0 213 261 60 90 chr10 53099983 53100117 -92489171 + MIR3 SINE MIR 38 167 -41 348 252 53 30 chr10 53100283 53100414 -92488874 + MER20B DNA MER1_type 31 164 -619 266 276 52 82 chr10 53100453 53100587 -92488701 + MIR SINE MIR 73 202 -60 271 159 250 57 chr10 53100590 53100678 -92488610 + MIR SINE MIR 49 153 -109 1423 201 6 46 chr10 53100980 53101304 -92487984 + AluJo SINE Alu 1 311 -1 9704 123 15 66 chr10 53101464 53102820 -92486468 + L1PA12 LINE L1 3371 4794 -1374 467 224 32 32 chr10 53102820 53102976 -92486312 + LTR9 LTR ERV1 457 612 0 9704 123 15 66 chr10 53102976 53103719 -92485569 + L1PA12 LINE L1 4794 5432 -736 2066 119 3 10 chr10 53103719 53104013 -92485275 - AluSg SINE Alu -18 292 1 9704 123 15 66 chr10 53104013 53104658 -92484630 + L1PA12 LINE L1 5432 6108 -60 2725 26 0 0 chr10 53104670 53104977 -92484311 + AluYa5 SINE Alu 1 307 -4 1385 93 0 34 chr10 53104986 53105190 -92484098 + AluY SINE Alu 115 311 0 494 252 211 34 chr10 53105473 53105795 -92483493 + L1MC4a LINE L1 5636 6017 -104 26 50 0 0 chr10 53105893 53105933 -92483355 + AT_rich Low_complexity Low_complexity 1 40 0 389 295 19 64 chr10 53106638 53106794 -92482494 + MIR SINE MIR 39 187 -75 2304 92 3 3 chr10 53107426 53107721 -92481567 + AluSq SINE Alu 1 295 -18 4243 134 28 3 chr10 53108222 53108929 -92480359 - L1MB3 LINE L1 -3 6180 5456 344 354 54 0 chr10 53109146 53109293 -92479995 + MIR SINE MIR 90 244 -18 2194 99 0 3 chr10 53109802 53110119 -92479169 + AluSg SINE Alu 1 316 0 189 305 61 0 chr10 53110443 53110525 -92478763 - MIR SINE MIR -30 232 146 1962 93 5 8 chr10 53113257 53113617 -92475671 + LTR7 LTR ERV1 1 448 -2 396 252 16 49 chr10 53114132 53114255 -92475033 - MER5A DNA MER1_type -54 135 17 241 197 91 15 chr10 53114428 53114494 -92474794 - MIR SINE MIR -148 114 44 1755 150 38 24 chr10 53114853 53115140 -92474148 + AluJb SINE Alu 1 291 -21 557 289 230 10 chr10 53115505 53115809 -92473479 - L2 LINE L2 -4 3309 2939 350 320 103 38 chr10 53115949 53116290 -92472998 + L2 LINE L2 2950 3312 -1 199 342 0 0 chr10 53116700 53116779 -92472509 - MIR SINE MIR 0 262 184 242 271 115 33 chr10 53116919 53117041 -92472247 - MIR3 SINE MIR -15 193 62 218 352 36 82 chr10 53118736 53118955 -92470333 + L2 LINE L2 3060 3268 -4 3037 192 47 17 chr10 53119817 53120542 -92468746 - L1ME1 LINE L1 -6 6160 5414 652 206 57 56 chr10 53120536 53120844 -92468444 - L1MD3 LINE L1 -11 7984 6058 * 192 329 27 14 chr10 53121048 53121121 -92468167 - L2 LINE L2 -30 3242 3169 321 26 0 0 chr10 53121161 53121199 -92468089 + (CA)n Simple_repeat Simple_repeat 1 38 0 182 204 222 0 chr10 53121880 53121934 -92467354 + L2 LINE L2 3241 3306 -7 21 36 0 0 chr10 53123668 53123696 -92465592 + AT_rich Low_complexity Low_complexity 1 28 0 544 248 69 14 chr10 53124212 53124357 -92464931 + MLT1J LTR MaLR 8 160 -351 861 146 32 43 chr10 53124372 53124557 -92464731 - MLT1D LTR MaLR -322 183 1 490 137 84 0 chr10 53124557 53124651 -92464637 + Charlie1 DNA MER1_type 2660 2761 0 262 291 46 31 chr10 53124683 53124809 -92464479 - MIR SINE MIR -73 135 15 635 303 42 15 chr10 53127143 53127618 -92461670 + L1MEd LINE L1 769 1256 -4863 424 344 172 17 chr10 53127638 53127993 -92461295 + L1MEd LINE L1 1318 1727 -4583 2065 106 28 7 chr10 53128331 53128634 -92460654 - AluSq SINE Alu 0 313 1 319 243 0 1 chr10 53128774 53128887 -92460401 + L1M3 LINE L1 5372 5473 -701 1692 183 28 0 chr10 53130023 53130307 -92458981 + AluJb SINE Alu 1 292 -20 266 328 78 11 chr10 53130366 53130548 -92458740 - MIR SINE MIR -50 212 20 1514 170 106 3 chr10 53130802 53131085 -92458203 - AluJo SINE Alu 0 312 1 2768 241 63 63 chr10 53131093 53132363 -92456925 - L1MC4 LINE L1 0 8042 6773 504 325 29 10 chr10 53132817 53133128 -92456160 - L1MEc LINE L1 -6022 374 58 554 254 51 41 chr10 53134453 53134650 -92454638 - MIR SINE MIR -1 261 63 190 378 36 0 chr10 53135672 53135783 -92453505 + L3b LINE CR1 1291 1405 -178 1754 155 150 13 chr10 53136005 53136379 -92452909 - MSTA LTR MaLR 0 428 4 267 271 144 17 chr10 53136452 53136570 -92452718 + MIR SINE MIR 130 262 0 2497 84 0 0 chr10 53136700 53137009 -92452279 + AluSc SINE Alu 1 309 0 209 295 66 0 chr10 53137196 53137257 -92452031 - MIR SINE MIR -2 260 196 823 237 25 5 chr10 53137285 53137483 -92451805 - MIR SINE MIR -59 203 2 354 284 33 49 chr10 53137750 53137891 -92451397 + MIR SINE MIR 16 151 -57 32 26 0 0 chr10 53137929 53137968 -92451320 + AT_rich Low_complexity Low_complexity 1 39 0 296 274 60 0 chr10 53138296 53138380 -92450908 - MIR SINE MIR -63 145 57 341 186 106 6 chr10 53138534 53138770 -92450518 + AluJ SINE Alu 1 299 -3 192 321 90 67 chr10 53139212 53139346 -92449942 + L2 LINE L2 3133 3269 -3 1811 165 0 7 chr10 53140405 53140696 -92448592 - AluJo SINE Alu -19 293 5 21 0 0 0 chr10 53141288 53141309 -92447979 + AT_rich Low_complexity Low_complexity 1 21 0 329 276 105 13 chr10 53141736 53141888 -92447400 - MIR SINE MIR -74 188 23 3235 174 39 5 chr10 53141919 53142141 -92447147 + MER6A DNA MER2_type 1 214 -651 441 0 0 0 chr10 53142141 53142190 -92447098 + (TG)n Simple_repeat Simple_repeat 2 50 0 3235 174 39 5 chr10 53142190 53142552 -92446736 + MER6A DNA MER2_type 214 605 0 208 364 116 25 chr10 53142815 53142936 -92446352 - L2 LINE L2 -19 3253 3122 27 0 0 0 chr10 53143595 53143622 -92445666 + AT_rich Low_complexity Low_complexity 1 27 0 663 244 0 0 chr10 53143819 53143946 -92445342 + FLAM_A SINE Alu 1 127 -6 532 247 209 4 chr10 53144401 53144664 -92444624 + L1ME4a LINE L1 5581 5897 -224 182 329 47 35 chr10 53144756 53144841 -92444447 + L2 LINE L2 3185 3270 -2 2025 117 11 0 chr10 53144867 53145150 -92444138 + AluSx SINE Alu 1 286 -26 2368 84 0 14 chr10 53145286 53145583 -92443705 - AluSc SINE Alu -16 293 1 1640 180 48 0 chr10 53145968 53146263 -92443025 + AluJo SINE Alu 1 309 -3 300 289 60 34 chr10 53146442 53146591 -92442697 - L1ME4a LINE L1 -9 6112 5960 248 250 150 39 chr10 53146752 53146932 -92442356 - L1ME4a LINE L1 -318 5803 5604 210 37 0 0 chr10 53147355 53147382 -92441906 + (TA)n Simple_repeat Simple_repeat 1 27 0 1517 38 0 56 chr10 53147382 53147584 -92441704 - L1PA5 LINE L1 -9 6145 5954 718 164 0 0 chr10 53147905 53148015 -92441273 + FRAM SINE Alu 33 142 -34 2341 73 0 3 chr10 53148104 53148393 -92440895 + AluY SINE Alu 14 301 -10 377 312 81 6 chr10 53149445 53149618 -92439670 - MER5A DNA MER1_type -3 186 1 219 200 20 0 chr10 53150349 53150399 -92438889 - L2 LINE L2 0 3313 3263 213 121 0 0 chr10 53152548 53152581 -92436707 + (CA)n Simple_repeat Simple_repeat 2 34 0 42 36 0 0 chr10 53152623 53152679 -92436609 + AT_rich Low_complexity Low_complexity 1 56 0 192 77 0 0 chr10 53152773 53152799 -92436489 + (A)n Simple_repeat Simple_repeat 1 26 0 700 191 83 0 chr10 53154052 53154220 -92435068 - MIR SINE MIR 0 262 81 2882 127 41 51 chr10 53155230 53155347 -92433941 - MER84 LTR ERV1 0 507 390 2198 108 7 7 chr10 53155347 53155652 -92433636 - AluSx SINE Alu -7 305 1 2882 127 41 51 chr10 53155652 53156046 -92433242 - MER84 LTR ERV1 -117 390 1 4692 39 2 0 chr10 53156235 53156799 -92432489 + L1PA4 LINE L1 5590 6154 -1 5181 139 20 4 chr10 53157201 53158045 -92431243 + L1PA11 LINE L1 3230 4087 -2059 313 116 0 0 chr10 53158045 53158088 -92431200 - MSTA LTR MaLR 0 428 386 6704 88 23 2 chr10 53158088 53159633 -92429655 + L1PA11 LINE L1 4603 6169 -5 5331 155 55 9 chr10 53160633 53161615 -92427673 + L1MC3 LINE L1 6759 7785 0 322 266 5 116 chr10 53161709 53161848 -92427440 + L2 LINE L2 2638 2750 -564 945 228 122 0 chr10 53161848 53162045 -92427243 - MER58A DNA MER1_type -3 221 1 322 266 5 116 chr10 53162045 53162104 -92427184 + L2 LINE L2 2750 2814 -500 591 236 70 19 chr10 53162314 53162471 -92426817 + MER103 DNA DNA 2 166 0 1326 183 87 55 chr10 53162574 53162987 -92426301 + MLT1D LTR MaLR 1 496 -9 660 274 54 50 chr10 53163135 53163394 -92425894 + MIR SINE MIR 3 262 0 431 192 0 40 chr10 53164728 53164827 -92424461 - L1MC4a LINE L1 -1901 5907 5813 228 274 41 14 chr10 53164839 53164912 -92424376 - MIR3 SINE MIR -6 202 128 780 278 186 12 chr10 53166125 53166539 -92422749 - L2 LINE L2 0 3313 2828 1543 208 98 26 chr10 53166600 53167213 -92422075 - MER99 DNA DNA 0 828 100 463 174 46 64 chr10 53167653 53167762 -92421526 - LTR40b LTR ERVL -260 202 96 486 236 79 51 chr10 53167907 53168085 -92421203 - MIR SINE MIR -65 197 15 2652 150 14 2 chr10 53168520 53168939 -92420349 + Tigger2a DNA MER2_type 1 424 -10 194 337 76 0 chr10 53169412 53169504 -92419784 - MIR SINE MIR -83 179 81 268 146 31 52 chr10 53169959 53170055 -92419233 + (TATAA)n Simple_repeat Simple_repeat 5 98 0 202 146 92 12 chr10 53170059 53170223 -92419065 + (TA)n Simple_repeat Simple_repeat 2 178 0 193 85 0 43 chr10 53170227 53170274 -92419014 + (TTA)n Simple_repeat Simple_repeat 3 47 0 * 299 142 99 0 chr10 53170263 53170425 -92418863 + (TA)n Simple_repeat Simple_repeat 2 179 0 224 145 75 25 chr10 53170467 53170626 -92418662 + (TA)n Simple_repeat Simple_repeat 1 167 0 180 337 163 10 chr10 53171025 53171123 -92418165 + MIR SINE MIR 31 143 -65 562 277 131 19 chr10 53171128 53171334 -92417954 - MIR SINE MIR -19 243 15 283 273 34 23 chr10 53171311 53171399 -92417889 + MIR3 SINE MIR 113 201 -7 * 325 334 0 4 chr10 53172156 53172256 -92417032 - MER5A DNA MER1_type -48 141 34 232 295 0 0 chr10 53172272 53172333 -92416955 + (CACG)n Simple_repeat Simple_repeat 3 63 0 2447 42 0 3 chr10 53172470 53172759 -92416529 - AluY SINE Alu -23 288 1 2904 3 0 0 chr10 53173377 53173686 -92415602 + AluYa5 SINE Alu 1 309 -2 368 221 61 38 chr10 53174140 53174271 -92415017 + L1ME3A LINE L1 5962 6095 -75 206 0 0 65 chr10 53174673 53174704 -92414584 + (TTTTTA)n Simple_repeat Simple_repeat 2 30 0 614 27 0 0 chr10 53174712 53174787 -92414501 - L1PA2 LINE L1 0 6155 6081 264 339 74 16 chr10 53175071 53175192 -92414096 + L2 LINE L2 3138 3265 -7 29 0 0 0 chr10 53175195 53175224 -92414064 + AT_rich Low_complexity Low_complexity 1 29 0 216 356 0 0 chr10 53175428 53175487 -92413801 + MIR SINE MIR 13 71 -191 191 250 16 31 chr10 53176431 53176495 -92412793 - L2 LINE L2 0 3313 3251 1326 209 103 31 chr10 53176629 53176829 -92412459 + MER2 DNA MER2_type 1 235 -109 2237 93 0 0 chr10 53176829 53177160 -92412128 - AluSg SINE Alu 0 331 1 1326 209 103 31 chr10 53177160 53177279 -92412009 + MER2 DNA MER2_type 235 344 0 483 254 125 97 chr10 53177310 53177629 -92411659 + MER102b DNA MER1_type 14 341 0 207 219 16 16 chr10 53178225 53178289 -92410999 + (TGAA)n Simple_repeat Simple_repeat 1 64 0 744 169 8 0 chr10 53178478 53178596 -92410692 + FLAM_A SINE Alu 5 123 -10 3842 48 4 9 chr10 53178774 53179228 -92410060 + L1PA7 LINE L1 5703 6154 0 24 0 0 0 chr10 53179601 53179625 -92409663 + AT_rich Low_complexity Low_complexity 1 24 0 1487 188 7 36 chr10 53180567 53180870 -92408418 + AluJo SINE Alu 1 294 -18 34 0 0 0 chr10 53180876 53180910 -92408378 + AT_rich Low_complexity Low_complexity 1 34 0 212 208 21 21 chr10 53181525 53181573 -92407715 - L2 LINE L2 -22 3291 3244 269 286 17 8 chr10 53181577 53181696 -92407592 + (TA)n Simple_repeat Simple_repeat 2 121 0 347 261 158 30 chr10 53181703 53181868 -92407420 - MIR SINE MIR -58 204 19 220 239 0 45 chr10 53182404 53182471 -92406817 + GA-rich Low_complexity Low_complexity 1 64 0 5175 185 83 43 chr10 53182896 53184696 -92404592 + L1MA10 LINE L1 3885 5611 -723 1016 154 0 0 chr10 53184696 53184852 -92404436 + L1MA5A LINE L1 6139 6294 -3 5175 185 83 43 chr10 53184852 53184879 -92404409 + L1MA10 LINE L1 5611 5635 -699 198 0 0 0 chr10 53184879 53184901 -92404387 + (TA)n Simple_repeat Simple_repeat 1 22 0 5175 185 83 43 chr10 53184901 53185187 -92404101 + L1MA10 LINE L1 5635 5908 -426 1723 161 35 0 chr10 53185187 53185472 -92403816 + AluJo SINE Alu 1 295 -17 5175 185 83 43 chr10 53185472 53185706 -92403582 + L1MA10 LINE L1 5908 6333 -1 189 0 0 0 chr10 53187726 53187747 -92401541 + (TTTCC)n Simple_repeat Simple_repeat 1 21 0 579 291 64 0 chr10 53188637 53188840 -92400448 + HAL1 LINE L1 1 216 -2291 * 3151 242 119 32 chr10 53188832 53190090 -92399198 + HAL1 LINE L1 790 2157 -350 225 280 54 43 chr10 53190360 53190453 -92398835 - MIR SINE MIR -61 147 54 258 167 0 0 chr10 53190553 53190595 -92398693 - MER5A DNA MER1_type 0 189 148 1293 185 8 28 chr10 53190595 53190849 -92398439 + L1MB2 LINE L1 5915 6163 -8 802 187 73 0 chr10 53190863 53191013 -92398275 - MER5A DNA MER1_type -28 161 1 323 214 0 89 chr10 53191064 53191176 -92398112 + MER5B DNA MER1_type 73 174 -4 261 256 214 17 chr10 53191269 53191386 -92397902 + MIR SINE MIR 114 253 -9 185 257 0 0 chr10 53192837 53192872 -92396416 + MIR SINE MIR 115 149 -59 665 295 110 8 chr10 53192913 53193150 -92396138 - MIR SINE MIR 0 262 2 458 217 48 48 chr10 53193517 53193683 -92395605 + MLT1K LTR MaLR 404 569 -19 2370 89 0 3 chr10 53194133 53194436 -92394852 + AluSg SINE Alu 1 302 -8 314 79 0 0 chr10 53195627 53195665 -92393623 - U2 snRNA snRNA -150 38 1 227 319 223 0 chr10 53195679 53195773 -92393515 + L2 LINE L2 3158 3272 0 869 173 16 54 chr10 53195866 53196051 -92393237 - MER58A DNA MER1_type 0 224 47 247 237 25 110 chr10 53196181 53196299 -92392989 + Charlie8 DNA MER1_type 234 2417 0 716 223 50 71 chr10 53196782 53197065 -92392223 + L1ME3A LINE L1 5722 5998 -172 1154 146 0 25 chr10 53197065 53197264 -92392024 + Tigger2 DNA MER2_type 1 194 -2524 2167 84 33 0 chr10 53197268 53197543 -92391745 + AluSg SINE Alu 1 284 -26 423 0 0 0 chr10 53197549 53197596 -92391692 + (TG)n Simple_repeat Simple_repeat 2 48 0 648 142 110 31 chr10 53197598 53197725 -92391563 + Tigger2 DNA MER2_type 2572 2708 -10 766 185 76 0 chr10 53197725 53197882 -92391406 + L1ME3A LINE L1 5997 6165 -5 2274 123 0 3 chr10 53198637 53198946 -92390342 - AluSx SINE Alu -4 308 1 1089 162 22 0 chr10 53199198 53199377 -92389911 - AluJo SINE Alu -31 281 99 1837 150 7 10 chr10 53199393 53199687 -92389601 - AluJb SINE Alu -19 293 1 423 258 89 40 chr10 53199820 53200045 -92389243 + L1MC4 LINE L1 7807 8042 0 933 137 24 36 chr10 53200420 53200588 -92388700 - L1MA9 LINE L1 -4 6308 6143 229 97 0 0 chr10 53200588 53200619 -92388669 - U7 snRNA snRNA -22 41 11 606 113 181 23 chr10 53200619 53200752 -92388536 - L1MA9 LINE L1 -132 6180 6027 233 305 98 16 chr10 53201075 53201236 -92388052 - MIR SINE MIR -63 145 20 203 227 0 30 chr10 53201383 53201449 -92387839 + (TTA)n Simple_repeat Simple_repeat 3 66 0 331 292 110 13 chr10 53201636 53201790 -92387498 - Tigger8 DNA MER2_type -386 280 112 817 156 58 0 chr10 53202537 53202691 -92386597 + AluSg/x SINE Alu 140 302 -7 1321 98 4 90 chr10 53202721 53202955 -92386333 - AluJb SINE Alu -13 299 86 786 151 6 57 chr10 53202987 53203146 -92386142 - AluSg/x SINE Alu -22 288 138 227 226 21 32 chr10 53203250 53203343 -92385945 + CT-rich Low_complexity Low_complexity 5 96 0 987 186 0 0 chr10 53203771 53203932 -92385356 + FRAM SINE Alu 8 168 -8 718 81 0 0 chr10 53204995 53205082 -92384206 - AluS SINE Alu -225 88 2 1018 41 0 0 chr10 53206324 53206447 -92382841 - L1PA4 LINE L1 -143 6012 5890 * 1212 246 80 12 chr10 53206442 53206853 -92382435 - L1M4 LINE L1 -2116 4030 3592 287 226 33 90 chr10 53206880 53207092 -92382196 + MLT1A2 LTR MaLR 1 200 -174 493 269 78 34 chr10 53207531 53207799 -92381489 - L1M4 LINE L1 -979 5167 4888 993 119 0 8 chr10 53207891 53208025 -92381263 + FLAM_C SINE Alu 1 133 0 1461 176 39 14 chr10 53208037 53208321 -92380967 + AluJb SINE Alu 1 291 -21 1145 196 34 50 chr10 53208921 53209278 -92380010 - MLT1A2 LTR MaLR 0 374 24 188 262 0 0 chr10 53210119 53210161 -92379127 + MIR SINE MIR 107 148 -60 1251 184 5 0 chr10 53211694 53211912 -92377376 - MER20 DNA MER1_type 0 219 1 213 331 14 14 chr10 53212700 53212842 -92376446 + GA-rich Low_complexity Low_complexity 2 143 0 561 115 0 11 chr10 53213424 53213567 -92375721 - AluY SINE Alu 0 338 197 1600 88 5 9 chr10 53214664 53214879 -92374409 + AluSx SINE Alu 1 214 -98 2371 110 36 33 chr10 53215578 53215941 -92373347 + THE1B LTR MaLR 1 364 0 313 285 70 69 chr10 53218341 53219019 -92370269 + L2 LINE L2 2435 3192 -121 281 305 48 6 chr10 53219564 53219731 -92369557 + MER63 DNA MER1_type 469 642 -419 2086 139 8 8 chr10 53221151 53221510 -92367778 + MER46B DNA MER2_type 3 236 0 330 352 24 8 chr10 53221556 53221681 -92367607 + MIR SINE MIR 6 132 -130 458 221 35 75 chr10 53222203 53222402 -92366886 + L1ME3A LINE L1 5808 5998 -172 949 137 0 54 chr10 53222402 53222607 -92366681 + Tigger2 DNA MER2_type 1 194 -2524 2100 87 32 4 chr10 53222611 53222888 -92366400 + AluSg SINE Alu 1 285 -25 226 85 21 21 chr10 53222908 53222955 -92366333 + (CTG)n Simple_repeat Simple_repeat 1 47 0 236 342 75 12 chr10 53224087 53224248 -92365040 + MIR SINE MIR 63 233 -29 230 269 30 0 chr10 53224402 53224469 -92364819 - MIR SINE MIR -135 127 59 1090 178 9 28 chr10 53225753 53225966 -92363322 - AluJo SINE Alu -103 209 1 454 228 102 24 chr10 53226678 53226805 -92362483 + MIR SINE MIR 21 157 -105 230 0 33 0 chr10 53226821 53226851 -92362437 + (TTAAA)n Simple_repeat Simple_repeat 4 34 0 342 192 99 0 chr10 53227158 53227293 -92361995 - AluSc SINE Alu -75 224 125 253 198 0 86 chr10 53227585 53227666 -92361622 + MER20 DNA MER1_type 94 167 -52 333 146 0 0 chr10 53227692 53227747 -92361541 + MER20 DNA MER1_type 164 218 -1 1596 265 66 21 chr10 53227747 53229114 -92360174 - L1MDa LINE L1 -3544 2996 1557 269 236 0 113 chr10 53230292 53230398 -92358890 + MIR SINE MIR 47 140 -122 632 274 40 48 chr10 53231275 53231527 -92357761 + MIR SINE MIR 13 262 0 353 255 206 57 chr10 53235501 53235783 -92353505 - MLT1H LTR MaLR -7 542 219 620 331 50 73 chr10 53236510 53237030 -92352258 + L1MEd LINE L1 617 1124 -4995 195 129 0 0 chr10 53237139 53237170 -92352118 + (CA)n Simple_repeat Simple_repeat 2 32 0 271 333 26 0 chr10 53237219 53237372 -92351916 + HAL1 LINE L1 1474 1630 -877 2159 133 0 0 chr10 53237382 53237684 -92351604 + AluSx SINE Alu 2 303 -9 295 287 31 54 chr10 53238191 53238320 -92350968 + L1MEd LINE L1 2610 2735 -3394 4912 70 31 0 chr10 53239670 53240317 -92348971 - PABL_B LTR ERV1 0 667 1 23 86 0 0 chr10 53240538 53240596 -92348692 + AT_rich Low_complexity Low_complexity 1 58 0 21 0 0 0 chr10 53240803 53240824 -92348464 + AT_rich Low_complexity Low_complexity 1 21 0 39 38 0 0 chr10 53240887 53240940 -92348348 + AT_rich Low_complexity Low_complexity 1 53 0 627 229 93 0 chr10 53242071 53242254 -92347034 + L1MC2 LINE L1 6066 6265 -79 955 209 58 15 chr10 53244315 53244644 -92344644 - MER33 DNA MER1_type -28 296 1 198 261 62 15 chr10 53244697 53244762 -92344526 - L2 LINE L2 -182 3090 3023 866 148 0 0 chr10 53245051 53245173 -92344115 + FLAM_C SINE Alu 1 122 -21 21 0 0 0 chr10 53245173 53245194 -92344094 + AT_rich Low_complexity Low_complexity 1 21 0 1402 188 32 49 chr10 53245274 53245619 -92343669 + MER44D DNA MER2_type 1 609 0 255 79 0 0 chr10 53245793 53245831 -92343457 + (TG)n Simple_repeat Simple_repeat 2 39 0 225 206 29 29 chr10 53246336 53246404 -92342884 + GA-rich Low_complexity Low_complexity 4 71 0 4518 191 32 15 chr10 53247151 53247817 -92341471 + L1MA7 LINE L1 4285 4939 -1352 2787 96 0 0 chr10 53247817 53248181 -92341107 + THE1B LTR MaLR 1 364 0 4518 191 32 15 chr10 53248181 53249492 -92339796 + L1MA7 LINE L1 4939 6291 0 335 287 119 32 chr10 53249772 53250183 -92339105 + L1M4 LINE L1 4892 5338 -808 2741 17 0 0 chr10 53250499 53250801 -92338487 + AluYa5 SINE Alu 1 302 -9 32 0 0 0 chr10 53251136 53251168 -92338120 + AT_rich Low_complexity Low_complexity 1 32 0 195 139 0 0 chr10 53251302 53251338 -92337950 + (CA)n Simple_repeat Simple_repeat 1 36 0 1649 218 16 19 chr10 53251341 53251717 -92337571 - MER82 DNA MER2_type -1 652 278 233 246 140 26 chr10 53252672 53252786 -92336502 - LTR16C LTR ERVL -5 486 360 409 328 75 70 chr10 53253369 53253995 -92335293 - HAL1 LINE L1 -1063 1444 816 740 251 45 52 chr10 53254707 53255169 -92334119 + L1 LINE L1 2716 3174 -2972 780 153 8 0 chr10 53255185 53255316 -92333972 + FLAM_C SINE Alu 11 142 -1 6452 218 24 13 chr10 53255331 53256830 -92332458 + L1M1 LINE L1 15 1529 -6036 10335 124 32 20 chr10 53256836 53258821 -92330467 + L1M1 LINE L1 1739 3740 -3825 7922 191 52 6 chr10 53258794 53260537 -92328751 + L1M1 LINE L1 4245 6067 -1498 * 636 136 0 9 chr10 53260531 53260641 -92328647 + L1MA1 LINE L1 5715 5823 -479 * 291 121 0 7 chr10 53260644 53260700 -92328588 - L1P4 LINE L1 -339 5827 5774 31 44 0 0 chr10 53260714 53260759 -92328529 + AT_rich Low_complexity Low_complexity 1 45 0 343 53 4 0 chr10 53260773 53260833 -92328455 - L1M3 LINE L1 -708 5446 5394 2875 94 19 17 chr10 53260882 53261349 -92327939 + L1MA1 LINE L1 5828 6295 -7 854 216 0 0 chr10 53261366 53261528 -92327760 + FRAM SINE Alu 1 154 -22 5091 180 32 11 chr10 53261544 53262596 -92326692 + L1 LINE L1 3177 4251 -1895 353 290 43 7 chr10 53262749 53262887 -92326401 - L1M4 LINE L1 -1977 4169 4027 * 8064 64 121 8 chr10 53262884 53264057 -92325231 + L1P LINE L1 46 1351 -4795 21 0 0 0 chr10 53265026 53265047 -92324241 + AT_rich Low_complexity Low_complexity 1 21 0 448 333 161 15 chr10 53266248 53266926 -92322362 - L2 LINE L2 -15 3298 2460 412 308 203 6 chr10 53266941 53267123 -92322165 - L2 LINE L2 -989 2325 2108 234 363 63 26 chr10 53267138 53267328 -92321960 - L2 LINE L2 -534 2780 2584 372 158 183 0 chr10 53267374 53267456 -92321832 + L1MA9 LINE L1 6215 6311 -1 227 276 181 0 chr10 53267780 53267885 -92321403 + LTR16A1 LTR ERVL 1 124 -333 364 293 167 35 chr10 53267942 53268116 -92321172 + LTR16A1 LTR ERVL 261 457 0 21 0 0 0 chr10 53268163 53268184 -92321104 + AT_rich Low_complexity Low_complexity 1 21 0 31 26 0 0 chr10 53270128 53270166 -92319122 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr10 53270891 53270913 -92318375 + AT_rich Low_complexity Low_complexity 1 22 0 267 286 17 25 chr10 53271462 53271581 -92317707 + LTR33 LTR ERVL 396 513 -8 462 194 83 0 chr10 53271615 53271723 -92317565 + MER5C DNA MER1_type 7 123 -201 2179 98 3 31 chr10 53271809 53272126 -92317162 + AluY SINE Alu 1 308 -3 201 283 0 19 chr10 53272552 53272605 -92316683 - L2 LINE L2 -5 3267 3216 21 57 0 0 chr10 53272620 53272655 -92316633 + AT_rich Low_complexity Low_complexity 1 35 0 501 297 95 11 chr10 53273045 53273590 -92315698 - L1ME LINE L1 -618 5544 4961 270 191 11 34 chr10 53274354 53274443 -92314845 + (CATA)n Simple_repeat Simple_repeat 2 88 0 290 277 0 12 chr10 53274454 53274537 -92314751 + (TA)n Simple_repeat Simple_repeat 2 83 0 2201 106 0 3 chr10 53274667 53274959 -92314329 - AluSg SINE Alu -19 291 1 21 0 0 0 chr10 53275818 53275839 -92313449 + AT_rich Low_complexity Low_complexity 1 21 0 577 37 12 12 chr10 53278569 53278650 -92310638 + (TAGA)n Simple_repeat Simple_repeat 3 83 0 717 334 135 6 chr10 53278717 53279137 -92310151 - L2 LINE L2 -215 3098 2624 1506 221 132 52 chr10 53279272 53279711 -92309577 + MLT2B3 LTR ERVL 1 474 -80 2692 226 46 92 chr10 53279739 53280057 -92309231 + ERVL-B3 LTR ERVL 2 333 -5431 240 167 0 0 chr10 53280057 53280099 -92309189 + 5S rRNA rRNA 1 42 -79 2692 226 46 92 chr10 53280099 53280539 -92308749 + ERVL-B3 LTR ERVL 333 764 -5000 4961 209 17 11 chr10 53280582 53281574 -92307714 + ERVL-B3 LTR ERVL 680 1677 -4087 234 139 0 0 chr10 53281599 53281642 -92307646 - L1MA8 LINE L1 -4 6287 6245 23154 133 13 80 chr10 53281652 53286350 -92302938 + L1P LINE L1 12 4393 -1753 369 145 0 14 chr10 53286345 53286414 -92302874 + L1PA7 LINE L1 2861 2928 -3218 * 21 57 0 19 chr10 53286429 53286467 -92302821 + AT_rich Low_complexity Low_complexity 1 39 -13 6846 87 28 0 chr10 53286467 53288207 -92301081 + L1PA7 LINE L1 4397 6150 -4 21 57 0 19 chr10 53288207 53288221 -92301067 + AT_rich Low_complexity Low_complexity 39 52 0 248 132 0 0 chr10 53288222 53288260 -92301028 - L1MA8 LINE L1 -45 6246 6209 3861 196 55 20 chr10 53288262 53289048 -92300240 + ERVL-B3 LTR ERVL 1677 2489 -3275 4712 196 11 7 chr10 53289048 53289916 -92299372 + ERVL-B3 LTR ERVL 3710 4581 -1183 1760 192 74 95 chr10 53290194 53290678 -92298610 + MER61E LTR ERV1 92 565 -4 390 235 84 42 chr10 53290686 53290805 -92298483 - MER58A DNA MER1_type 0 136 13 315 325 43 0 chr10 53290827 53291015 -92298273 + L1M4 LINE L1 2777 2972 -3174 486 265 64 74 chr10 53291018 53291531 -92297757 + L1MC5 LINE L1 6721 7228 -733 870 252 58 33 chr10 53291654 53292138 -92297150 + L1MC5 LINE L1 7262 7757 -204 505 149 53 11 chr10 53292194 53292288 -92297000 + MER4A LTR ERV1 1 98 -566 1750 128 9 25 chr10 53292288 53292639 -92296649 + MER4A LTR ERV1 261 664 0 270 232 0 62 chr10 53292641 53292753 -92296535 + L1MC5 LINE L1 7810 7914 -47 590 306 108 43 chr10 53292766 53293287 -92296001 + L1M4 LINE L1 2952 3508 -2638 604 75 0 0 chr10 53293422 53293502 -92295786 - MADE1 DNA Mariner 0 80 1 267 284 193 24 chr10 53293559 53293813 -92295475 + L1M4 LINE L1 3752 4048 -2098 817 227 68 33 chr10 53293868 53294245 -92295043 + LTR16C LTR ERVL 67 487 -4 25 95 0 0 chr10 53294248 53294322 -92294966 + AT_rich Low_complexity Low_complexity 1 74 0 2152 143 27 14 chr10 53294913 53295283 -92294005 - THE1C LTR MaLR 0 375 1 355 267 26 43 chr10 53295417 53295533 -92293755 + MER5A DNA MER1_type 72 185 -4 21 57 0 0 chr10 53295584 53295619 -92293669 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr10 53295653 53295674 -92293614 + AT_rich Low_complexity Low_complexity 1 21 0 31 0 0 0 chr10 53295711 53295742 -92293546 + AT_rich Low_complexity Low_complexity 1 31 0 667 227 43 37 chr10 53296484 53296604 -92292684 - MER58A DNA MER1_type -2218 202 79 1860 153 40 35 chr10 53296604 53296977 -92292311 + THE1C LTR MaLR 1 375 0 667 227 43 37 chr10 53296977 53297019 -92292269 - MER58A DNA MER1_type -2341 79 39 1915 145 0 0 chr10 53298627 53298916 -92290372 - AluSx SINE Alu -1 311 23 183 353 0 15 chr10 53298967 53299035 -92290253 - MER5A DNA MER1_type -28 161 95 291 291 13 25 chr10 53299554 53299712 -92289576 + L1MC5 LINE L1 7366 7521 -440 696 233 81 36 chr10 53299757 53300066 -92289222 + L1MC5 LINE L1 7606 7928 -33 221 356 10 29 chr10 53300080 53300184 -92289104 - MER5B DNA MER1_type -69 109 8 27 0 0 0 chr10 53300200 53300227 -92289061 + AT_rich Low_complexity Low_complexity 1 27 0 385 325 54 18 chr10 53300705 53300871 -92288417 - MER5B DNA MER1_type 0 178 7 903 317 49 55 chr10 53301216 53301927 -92287361 - L2 LINE L2 -2 3311 2595 1430 193 55 11 chr10 53302013 53302288 -92287000 + AluJo SINE Alu 1 287 -25 213 136 91 0 chr10 53302297 53302363 -92286925 + (TA)n Simple_repeat Simple_repeat 2 73 0 202 338 15 0 chr10 53302661 53302729 -92286559 - L2 LINE L2 -575 2739 2671 206 265 0 20 chr10 53302769 53302818 -92286470 + L2 LINE L2 2696 2743 -571 381 356 158 4 chr10 53302820 53303073 -92286215 - L2 LINE L2 -701 2613 2322 834 193 27 5 chr10 53303090 53303277 -92286011 - L1MA8 LINE L1 -3 6288 6098 349 379 155 0 chr10 53303278 53303587 -92285701 - L2 LINE L2 -999 2315 1959 326 360 107 4 chr10 53303781 53304034 -92285254 - MLT1J2 LTR MaLR -171 279 1 25 75 0 0 chr10 53304036 53304089 -92285199 + AT_rich Low_complexity Low_complexity 1 53 0 245 206 0 15 chr10 53304402 53304470 -92284818 + (TA)n Simple_repeat Simple_repeat 1 67 0 2307 81 3 7 chr10 53304702 53305010 -92284278 + AluSq SINE Alu 1 307 -6 1314 263 106 22 chr10 53305448 53306082 -92283206 - L1ME3A LINE L1 -222 5948 5262 2111 100 7 3 chr10 53306185 53306508 -92282780 + AluSq SINE Alu 1 324 0 284 263 83 52 chr10 53308307 53308726 -92280562 - L1ME3A LINE L1 -1606 4540 4109 455 290 106 70 chr10 53309651 53309992 -92279296 - MLT1H1 LTR MaLR 0 555 203 187 68 0 68 chr10 53310057 53310101 -92279187 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 273 128 0 0 chr10 53310184 53310231 -92279057 + (TAA)n Simple_repeat Simple_repeat 2 48 0 1028 248 0 0 chr10 53310260 53310482 -92278806 - MIR SINE MIR -38 224 3 46 0 0 0 chr10 53310940 53310986 -92278302 + AT_rich Low_complexity Low_complexity 1 46 0 32 0 0 0 chr10 53312358 53312390 -92276898 + AT_rich Low_complexity Low_complexity 1 32 0 255 389 28 0 chr10 53313121 53313229 -92276059 - L2 LINE L2 -1 3271 3161 219 297 186 0 chr10 53313777 53313895 -92275393 - L2 LINE L2 0 3272 3133 306 240 41 82 chr10 53314602 53314798 -92274490 + L1M4 LINE L1 4963 5150 -996 715 318 60 14 chr10 53314952 53315304 -92273984 - L1ME3A LINE L1 -35 6135 5768 250 77 0 39 chr10 53316384 53316436 -92272852 + (TTTTA)n Simple_repeat Simple_repeat 1 50 0 7433 25 0 0 chr10 53316436 53318035 -92271253 - L1PA3 LINE L1 -24 6131 4533 17315 29 1 0 chr10 53318035 53320118 -92269170 + L1P LINE L1 2404 4487 -1659 1927 115 49 0 chr10 53320197 53320484 -92268804 + AluSx SINE Alu 1 301 -11 4922 166 100 11 chr10 53320799 53321735 -92267553 + LTR28 LTR ERV1 1 1020 0 6173 165 12 4 chr10 53322886 53324951 -92264337 + L1PB1 LINE L1 4069 6151 0 1072 146 0 0 chr10 53324957 53325115 -92264173 + AluSg/x SINE Alu 137 294 -18 195 69 0 0 chr10 53325125 53325154 -92264134 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 1926 121 28 3 chr10 53325165 53325454 -92263834 + AluSq SINE Alu 1 296 -17 186 403 23 8 chr10 53325864 53325993 -92263295 + L2 LINE L2 3183 3313 0 1257 98 37 5 chr10 53327019 53327233 -92262055 - L1MA4 LINE L1 -9 6291 6071 4984 169 43 19 chr10 53327262 53328673 -92260615 - L1PA16 LINE L1 -1 6165 4747 1416 171 7 0 chr10 53329219 53329488 -92259800 - L1MA4 LINE L1 -8 6292 6022 292 226 0 0 chr10 53329489 53329551 -92259737 + L1MA4A LINE L1 5639 5700 -605 * 668 162 0 1 chr10 53329528 53329645 -92259643 - L1P5 LINE L1 -356 5795 5680 351 318 86 40 chr10 53330135 53330333 -92258955 + L1MEd LINE L1 562 768 -5351 29 70 0 0 chr10 53330394 53330451 -92258837 + AT_rich Low_complexity Low_complexity 1 57 0 432 252 102 15 chr10 53330675 53330882 -92258406 + L1ME LINE L1 5587 5808 -358 22 35 0 0 chr10 53330893 53330922 -92258366 + AT_rich Low_complexity Low_complexity 1 29 0 513 253 199 34 chr10 53331419 53331827 -92257461 - L1M4 LINE L1 -2167 3979 3505 525 320 45 22 chr10 53331846 53332205 -92257083 + L1ME LINE L1 5450 5816 -346 25 0 0 0 chr10 53332251 53332276 -92257012 + AT_rich Low_complexity Low_complexity 1 25 0 267 31 0 0 chr10 53332752 53332784 -92256504 + (TG)n Simple_repeat Simple_repeat 1 32 0 25 51 0 0 chr10 53332908 53332947 -92256341 + AT_rich Low_complexity Low_complexity 1 39 0 2421 151 16 38 chr10 53333895 53334338 -92254950 - Tigger2a DNA MER2_type -1 433 1 27 0 0 0 chr10 53334969 53334996 -92254292 + AT_rich Low_complexity Low_complexity 1 27 0 2186 154 22 2 chr10 53335204 53335612 -92253676 - L1MA4A LINE L1 -7 6296 5881 1173 176 10 0 chr10 53335612 53335817 -92253471 + L1MA4A LINE L1 5674 5880 -423 209 307 53 79 chr10 53335829 53335943 -92253345 - MIR SINE MIR -99 163 53 186 256 139 12 chr10 53337724 53337810 -92251478 + L3 LINE CR1 989 1085 -492 322 323 71 0 chr10 53337816 53337915 -92251373 + L2 LINE L2 3163 3268 -4 341 353 124 24 chr10 53337948 53338319 -92250969 + L3 LINE CR1 1113 1520 -57 206 311 210 17 chr10 53338396 53338515 -92250773 - MER5A DNA MER1_type -1 188 47 1333 166 4 20 chr10 53338855 53339108 -92250180 + L1MC1 LINE L1 5980 6228 -105 299 191 73 0 chr10 53339212 53339280 -92250008 + L1MC1 LINE L1 6256 6328 -5 438 275 96 5 chr10 53339474 53339692 -92249596 + L1M4 LINE L1 4471 4708 -1438 1790 104 64 54 chr10 53339970 53340268 -92249020 - AluSq SINE Alu -12 301 1 2111 114 0 10 chr10 53340786 53341085 -92248203 + AluSg SINE Alu 6 301 -9 368 316 7 22 chr10 53341929 53342065 -92247223 + HAL1 LINE L1 1483 1616 -891 719 294 31 22 chr10 53342217 53342540 -92246748 + L1M4 LINE L1 3699 4024 -2122 33380 27 0 0 chr10 53342594 53347359 -92241929 - L1PA3 LINE L1 0 6155 1390 33 43 0 0 chr10 53347489 53347536 -92241752 + GC_rich Low_complexity Low_complexity 1 47 0 1581 166 18 69 chr10 53347664 53348055 -92241233 + L1MA7 LINE L1 5912 6282 -9 887 116 55 20 chr10 53348374 53348520 -92240768 - AluSg1 SINE Alu -158 151 1 224 196 147 49 chr10 53348622 53348724 -92240564 - L2 LINE L2 -1 3312 3201 2283 71 30 0 chr10 53348966 53349261 -92240027 + AluY SINE Alu 1 304 -7 418 284 77 18 chr10 53349357 53349526 -92239762 - MER110 LTR ERV1 -7 484 306 553 308 33 56 chr10 53349840 53350142 -92239146 - MER110-int LTR ERV1 0 4647 4353 235 226 15 95 chr10 53350495 53350632 -92238656 - HAL1 LINE L1 -121 2386 2261 370 321 72 52 chr10 53350687 53351367 -92237921 - HAL1 LINE L1 -836 1671 978 228 390 39 32 chr10 53352272 53352426 -92236862 + MIR3 SINE MIR 23 177 -31 5539 168 19 14 chr10 53352545 53354238 -92235050 + L1MA3 LINE L1 4127 5830 -475 15846 182 44 4 chr10 53354247 53358491 -92230797 + L1PB2 LINE L1 1 4415 -2447 2037 191 48 62 chr10 53358491 53359052 -92230236 - MLT2B3 LTR ERVL 0 554 2 260 107 0 160 chr10 53359053 53359128 -92230160 - HERVL-B3 LTR ERVL 0 5654 5592 * 656 135 0 0 chr10 53359123 53359227 -92230061 - HERVL-B3 LTR ERVL -226 5428 5325 189 295 0 64 chr10 53359227 53359305 -92229983 - MIR3 SINE MIR -124 84 12 23022 112 19 3 chr10 53359305 53361295 -92227993 - HERVL LTR ERVL -408 5246 3289 2146 122 3 0 chr10 53361295 53361591 -92227697 + AluSx SINE Alu 1 297 -15 23022 112 19 3 chr10 53361591 53363688 -92225600 - HERVL LTR ERVL -2365 3289 1086 5725 160 9 26 chr10 53363688 53365217 -92224071 + L1PB2 LINE L1 4999 6487 -380 423 0 0 0 chr10 53365217 53365264 -92224024 + (TAGA)n Simple_repeat Simple_repeat 3 49 0 5725 160 9 26 chr10 53365264 53365633 -92223655 + L1PB2 LINE L1 6487 6860 -7 3046 117 0 35 chr10 53366029 53366541 -92222747 + L1MA3 LINE L1 5812 6305 0 297 307 57 57 chr10 53367265 53367441 -92221847 - MIR SINE MIR -86 176 1 266 230 9 106 chr10 53367865 53367978 -92221310 - L1ME LINE L1 -5939 131 30 2177 86 0 0 chr10 53368301 53368619 -92220669 - AluSc SINE Alu 0 318 1 4747 142 15 10 chr10 53369069 53369866 -92219422 - L1PA16 LINE L1 0 6166 5366 24 32 0 0 chr10 53369957 53369988 -92219300 + AT_rich Low_complexity Low_complexity 1 31 0 564 329 98 40 chr10 53371613 53372090 -92217198 + MLT1K LTR MaLR 79 583 -5 183 129 0 0 chr10 53372277 53372308 -92216980 + (TG)n Simple_repeat Simple_repeat 2 32 0 234 193 0 0 chr10 53372414 53372471 -92216817 + (TA)n Simple_repeat Simple_repeat 1 57 0 1865 164 0 20 chr10 53373569 53373874 -92215414 - AluSx SINE Alu -13 299 1 1486 231 5 9 chr10 53374689 53375119 -92214169 - MER89 LTR ERV1 -68 491 1 222 185 123 12 chr10 53375244 53375325 -92213963 - MIR SINE MIR -41 221 132 21 36 0 0 chr10 53375482 53375510 -92213778 + AT_rich Low_complexity Low_complexity 1 28 0 185 191 0 21 chr10 53376229 53376276 -92213012 + CT-rich Low_complexity Low_complexity 3 48 0 279 351 0 11 chr10 53376277 53376371 -92212917 - L2 LINE L2 -31 3282 3190 246 361 0 19 chr10 53376413 53376521 -92212767 + MIR SINE MIR 59 164 -98 23 0 0 0 chr10 53376529 53376552 -92212736 + AT_rich Low_complexity Low_complexity 1 23 0 277 294 49 10 chr10 53376766 53376868 -92212420 + MER5C DNA MER1_type 206 311 -13 837 218 32 50 chr10 53377121 53377341 -92211947 + MER20 DNA MER1_type 4 219 0 649 181 118 0 chr10 53377631 53377775 -92211513 + LTR47A LTR ERVL 261 421 -31 297 174 41 102 chr10 53377916 53378014 -92211274 - L2 LINE L2 -1 3312 3221 4939 183 16 29 chr10 53378706 53379538 -92209750 - L1PB4 LINE L1 -2 6154 5313 2102 119 0 0 chr10 53379538 53379831 -92209457 - AluSx SINE Alu -19 293 1 4939 183 16 29 chr10 53379831 53380768 -92208520 - L1PB4 LINE L1 -843 5313 4397 992 246 17 10 chr10 53380748 53381036 -92208252 - L1PB4 LINE L1 -3086 3060 2771 * 25 0 0 0 chr10 53381107 53381132 -92208156 + AT_rich Low_complexity Low_complexity 1 25 0 252 196 20 49 chr10 53381307 53381409 -92207879 + (TAGA)n Simple_repeat Simple_repeat 4 102 0 318 305 33 38 chr10 53481637 53481850 -92107438 + L1MEc LINE L1 1604 1815 -4581 1106 270 77 28 chr10 53482005 53482862 -92106426 + L1MEc LINE L1 2044 2894 -3321 28 86 0 0 chr10 53482872 53482942 -92106346 + AT_rich Low_complexity Low_complexity 1 70 0 810 197 7 7 chr10 53482943 53483134 -92106154 + FRAM SINE Alu 1 185 0 355 299 23 6 chr10 53483177 53483354 -92105934 + L1MEc LINE L1 4074 4253 -1962 579 308 51 34 chr10 53483486 53483899 -92105389 + L1MEc LINE L1 4846 5265 -950 * 1125 174 107 21 chr10 53483892 53484134 -92105154 + L1MC1 LINE L1 6065 6327 -6 2173 245 104 27 chr10 53484184 53485084 -92104204 + L1MEc LINE L1 5244 6219 -20 210 321 75 58 chr10 53485692 53485985 -92103303 - L2 LINE L2 -421 2893 2596 1674 74 4 26 chr10 53486761 53486990 -92102298 - AluY SINE Alu -20 291 68 470 232 65 122 chr10 53487525 53487771 -92101517 - MIR SINE MIR 0 262 31 1977 152 0 9 chr10 53489246 53489561 -92099727 - AluSx SINE Alu 0 312 1 4648 171 18 18 chr10 53491044 53492357 -92096931 + L1MB1 LINE L1 4848 6167 -1 204 233 0 0 chr10 53492824 53492867 -92096421 + (TAG)n Simple_repeat Simple_repeat 1 43 0 713 271 97 40 chr10 53493225 53493605 -92095683 + MLT1I LTR MaLR 4 405 -4 273 263 6 26 chr10 53494168 53494324 -92094964 + GA-rich Low_complexity Low_complexity 3 155 0 226 314 0 0 chr10 53494545 53494615 -92094673 - Charlie8 DNA MER1_type 0 2417 2348 257 279 202 0 chr10 53494626 53494730 -92094558 - Charlie8 DNA MER1_type -1923 494 370 1286 220 45 24 chr10 53495429 53495473 -92093815 - MLT2B1 LTR ERVL 0 520 478 294 29 0 0 chr10 53495473 53495508 -92093780 + (TG)n Simple_repeat Simple_repeat 2 36 0 1286 220 45 24 chr10 53495508 53495909 -92093379 - MLT2B1 LTR ERVL -42 478 21 25 75 0 0 chr10 53496434 53496487 -92092801 + AT_rich Low_complexity Low_complexity 1 53 0 199 255 20 0 chr10 53496565 53496616 -92092672 + L2 LINE L2 3215 3266 -6 755 224 28 51 chr10 53496687 53496901 -92092387 + MER3 DNA MER1_type 1 209 0 425 282 9 9 chr10 53496923 53497033 -92092255 + MER5B DNA MER1_type 20 129 -49 26 30 0 0 chr10 53497088 53497121 -92092167 + AT_rich Low_complexity Low_complexity 1 33 0 2757 22 0 0 chr10 53497414 53497725 -92091563 + AluY SINE Alu 1 311 0 586 246 89 57 chr10 53498024 53498374 -92090914 + L1ME4a LINE L1 5547 5907 -214 311 299 90 7 chr10 53498405 53498549 -92090739 + L1ME LINE L1 5488 5643 -519 257 281 83 16 chr10 53498664 53498785 -92090503 - MER112 DNA MER1_type -131 129 1 4083 95 4 153 chr10 53499155 53499967 -92089321 - LTR12 LTR ERV1 -23 691 1 222 264 299 0 chr10 53500093 53500180 -92089108 - L2 LINE L2 -9 3304 3192 557 290 170 49 chr10 53501923 53502363 -92086925 - MLT1K LTR MaLR -36 552 2 465 256 146 30 chr10 53502821 53503020 -92086268 - MLT1J2 LTR MaLR -164 286 65 956 219 50 100 chr10 53503187 53503608 -92085680 - MLT1C LTR MaLR -3 464 65 426 244 17 42 chr10 53503722 53503841 -92085447 + L1MC1 LINE L1 6218 6333 0 22 0 0 0 chr10 53504222 53504244 -92085044 + AT_rich Low_complexity Low_complexity 1 22 0 186 224 0 52 chr10 53504578 53504636 -92084652 - MER5C DNA MER1_type -144 180 126 25 0 0 0 chr10 53504854 53504879 -92084409 + AT_rich Low_complexity Low_complexity 1 25 0 846 167 0 0 chr10 53504986 53505118 -92084170 + FLAM_C SINE Alu 1 132 -11 2257 85 0 0 chr10 53505140 53505421 -92083867 + AluY SINE Alu 1 281 -30 439 322 41 12 chr10 53505622 53505793 -92083495 - MIR SINE MIR -79 183 8 631 181 16 0 chr10 53506459 53506586 -92082702 - L1MC4 LINE L1 0 8042 7914 444 275 0 0 chr10 53506595 53506733 -92082555 + (TATATG)n Simple_repeat Simple_repeat 3 140 0 1773 231 130 5 chr10 53506733 53507301 -92081987 - L1MC4 LINE L1 -124 7918 7280 23 0 0 0 chr10 53507308 53507331 -92081957 + AT_rich Low_complexity Low_complexity 1 23 0 571 314 179 20 chr10 53507882 53508274 -92081014 - L2 LINE L2 -618 2696 2243 6516 176 62 46 chr10 53509071 53509484 -92079804 + ERVL LTR ERVL 4211 4616 -1148 2404 73 0 13 chr10 53509484 53509784 -92079504 + AluY SINE Alu 1 296 -15 6516 176 62 46 chr10 53509784 53510732 -92078556 + ERVL LTR ERVL 4616 5593 -171 1846 142 23 0 chr10 53510749 53511051 -92078237 + AluSp SINE Alu 1 309 -4 2485 224 43 20 chr10 53511052 53511696 -92077592 + L1ME1 LINE L1 5480 6138 -28 266 303 261 4 chr10 53511814 53512052 -92077236 - L2 LINE L2 -687 2627 2329 209 343 56 56 chr10 53513647 53513825 -92075463 - L2 LINE L2 -266 3006 2829 274 253 38 0 chr10 53513886 53513965 -92075323 + MER117 DNA MER1_type 30 111 -86 22 80 0 0 chr10 53514842 53514892 -92074396 + AT_rich Low_complexity Low_complexity 1 50 0 511 292 33 45 chr10 53515139 53515382 -92073906 - MLT1L LTR MaLR -175 440 201 432 366 66 29 chr10 53515637 53516227 -92073061 - L2 LINE L2 -908 2406 1795 306 119 63 8 chr10 53516717 53516843 -92072445 + (TA)n Simple_repeat Simple_repeat 1 133 0 1687 195 3 3 chr10 53517063 53517370 -92071918 + AluJb SINE Alu 1 307 -5 560 311 71 13 chr10 53518260 53518485 -92070803 - MIR SINE MIR -14 248 11 23 82 0 31 chr10 53518584 53518682 -92070606 + AT_rich Low_complexity Low_complexity 1 95 0 21 0 0 0 chr10 53518839 53518860 -92070428 + AT_rich Low_complexity Low_complexity 1 21 0 1793 163 17 0 chr10 53519553 53519841 -92069447 + AluJb SINE Alu 1 293 -19 715 306 57 0 chr10 53520346 53520591 -92068697 - MIR SINE MIR -2 260 2 298 317 0 20 chr10 53520981 53521082 -92068206 + MER94 DNA DNA 2 100 -34 870 235 15 0 chr10 53521312 53521516 -92067772 - L1PB4 LINE L1 -1 6155 5949 1233 342 112 32 chr10 53522302 53523457 -92065831 + L2 LINE L2 2024 3272 0 1795 184 51 17 chr10 53523541 53523894 -92065394 - MLT1A1 LTR MaLR 0 365 1 300 324 42 34 chr10 53524682 53525006 -92064282 + L1ME4a LINE L1 5260 5585 -536 347 219 0 14 chr10 53525012 53525085 -92064203 - MLT1A1 LTR MaLR -155 210 139 331 247 39 39 chr10 53525115 53525269 -92064019 + L1ME4a LINE L1 5633 5786 -335 905 143 0 45 chr10 53525272 53525426 -92063862 - AluJb SINE Alu -5 307 161 293 261 85 8 chr10 53525734 53525864 -92063424 + L1ME4a LINE L1 5978 6117 -4 200 111 28 0 chr10 53526342 53526378 -92062910 + (CA)n Simple_repeat Simple_repeat 1 37 0 201 208 64 144 chr10 53526651 53526776 -92062512 - L2 LINE L2 -2 3311 3197 362 277 150 4 chr10 53526791 53527044 -92062244 + L1ME4a LINE L1 5545 5834 -287 1683 156 75 28 chr10 53527506 53527864 -92061424 + THE1C LTR MaLR 1 375 0 5034 116 42 12 chr10 53527908 53528769 -92060519 + L1PA15 LINE L1 4918 5817 -348 377 20 0 20 chr10 53528769 53528820 -92060468 + (CA)n Simple_repeat Simple_repeat 2 51 0 5034 116 42 12 chr10 53528820 53529177 -92060111 + L1PA15 LINE L1 5817 6162 -3 300 334 153 39 chr10 53529507 53529920 -92059368 - L2 LINE L2 0 3272 2813 236 318 0 0 chr10 53530050 53530113 -92059175 + MIR3 SINE MIR 125 187 -21 513 273 101 38 chr10 53531456 53531665 -92057623 + MIR SINE MIR 10 231 -31 231 114 0 0 chr10 53532890 53532925 -92056363 + (CTG)n Simple_repeat Simple_repeat 2 36 0 365 319 95 23 chr10 53533010 53533452 -92055836 + L1MC/D LINE L1 5297 5804 -2004 808 268 75 70 chr10 53534228 53534586 -92054702 - L2 LINE L2 0 3313 2954 26 30 0 0 chr10 53534776 53534809 -92054479 + AT_rich Low_complexity Low_complexity 1 33 0 21 71 0 0 chr10 53534872 53534914 -92054374 + AT_rich Low_complexity Low_complexity 1 42 0 1667 152 4 19 chr10 53535021 53535290 -92053998 - AluSx SINE Alu -14 298 34 492 281 192 24 chr10 53535374 53535712 -92053576 + LTR16C LTR ERVL 97 491 0 262 373 31 19 chr10 53535920 53536081 -92053207 - L2 LINE L2 -223 3049 2887 220 271 21 83 chr10 53536679 53536775 -92052513 - MIR3 SINE MIR -32 176 87 235 238 48 0 chr10 53537246 53537309 -92051979 + MER81 DNA DNA 44 109 -5 831 283 35 24 chr10 53538340 53538630 -92050658 + L2 LINE L2 2524 2816 -498 316 252 138 32 chr10 53538659 53538782 -92050506 + L2 LINE L2 3177 3312 -1 358 364 21 5 chr10 53538804 53538991 -92050297 + MIR SINE MIR 48 237 -25 2388 146 6 0 chr10 53538991 53539353 -92049935 + THE1B LTR MaLR 1 364 0 10679 97 13 60 chr10 53539353 53541011 -92048277 + THE1B-int LTR MaLR 1 1580 0 2576 106 11 0 chr10 53541011 53541371 -92047917 + THE1B LTR MaLR 1 364 0 23 33 0 0 chr10 53542534 53542564 -92046724 + AT_rich Low_complexity Low_complexity 1 30 0 184 289 19 0 chr10 53543468 53543520 -92045768 - L2 LINE L2 -17 3296 3244 827 87 0 8 chr10 53543562 53543689 -92045599 - L1PA13 LINE L1 -4 6159 6034 324 0 0 0 chr10 53544771 53544807 -92044481 + (TTA)n Simple_repeat Simple_repeat 2 37 0 210 310 56 12 chr10 53545668 53545764 -92043524 + MIR SINE MIR 55 154 -54 233 232 226 37 chr10 53545887 53546051 -92043237 + MLT1L LTR MaLR 195 389 -226 205 222 0 0 chr10 53546215 53546260 -92043028 + MIR3 SINE MIR 159 203 -5 275 312 13 45 chr10 53546803 53546960 -92042328 + LTR67 LTR ERVL 402 553 -4 26 50 0 0 chr10 53547476 53547516 -92041772 + AT_rich Low_complexity Low_complexity 1 40 0 1666 236 71 19 chr10 53548258 53548736 -92040552 - MLT1D LTR MaLR 0 505 3 571 242 20 0 chr10 53548771 53548924 -92040364 + L1MD3 LINE L1 7821 7976 -19 234 346 100 8 chr10 53548964 53549094 -92040194 + MER5A DNA MER1_type 47 188 -1 595 212 84 34 chr10 53549110 53549289 -92039999 + MER5A DNA MER1_type 2 189 0 295 289 75 15 chr10 53549320 53549436 -92039852 - MIR SINE MIR -63 145 36 17890 36 1 0 chr10 53550564 53553497 -92035791 + L1PA4 LINE L1 3218 6154 -1 233 270 170 0 chr10 53554497 53554597 -92034691 - L2 LINE L2 -78 3235 3119 195 42 0 0 chr10 53554747 53554771 -92034517 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 226 194 75 0 chr10 53555606 53555673 -92033615 - L1MCa LINE L1 -4347 2079 2008 230 290 10 0 chr10 53555677 53555777 -92033511 + L1MC4 LINE L1 6592 6692 -1350 * 273 231 13 0 chr10 53555701 53555779 -92033509 - L1MC4 LINE L1 -1339 6703 6625 * 345 250 71 29 chr10 53555757 53555897 -92033391 - L1MC4 LINE L1 -1959 5849 5704 322 243 0 29 chr10 53555929 53555999 -92033289 + MER69 DNA AcHobo 1 68 -2458 220 298 74 25 chr10 53556279 53556400 -92032888 + L2 LINE L2 3179 3305 -8 225 304 122 14 chr10 53556488 53556636 -92032652 - L3 LINE CR1 -801 776 613 289 296 10 41 chr10 53557183 53557281 -92032007 - MER5A DNA MER1_type -1 188 94 449 248 166 13 chr10 53557300 53557457 -92031831 + MER5A DNA MER1_type 9 189 0 290 280 0 85 chr10 53557570 53557688 -92031600 - L2 LINE L2 -47 3266 3159 2015 63 0 114 chr10 53557729 53558045 -92031243 + AluSg SINE Alu 1 280 -30 192 40 0 0 chr10 53558048 53558073 -92031215 + (TAAA)n Simple_repeat Simple_repeat 4 28 0 436 296 141 7 chr10 53558082 53558224 -92031064 - MIR SINE MIR -95 167 7 4731 124 37 9 chr10 53558985 53559791 -92029497 - L1MA3 LINE L1 -1 6304 5476 2700 175 19 11 chr10 53559791 53560600 -92028688 - L1P4 LINE L1 -591 5575 4761 403 82 0 0 chr10 53560600 53560661 -92028627 + MSTB1 LTR MaLR 358 418 -14 4031 218 46 14 chr10 53560674 53562130 -92027158 - L1M3 LINE L1 -432 5736 4198 821 222 171 21 chr10 53562644 53562978 -92026310 - HsTC2 DNA Tc2 0 1898 1515 282 194 119 0 chr10 53563089 53563156 -92026132 - HsTC2 DNA Tc2 -1823 75 1 461 268 83 48 chr10 53563935 53564147 -92025141 - MIR SINE MIR -29 233 16 451 314 74 17 chr10 53564607 53564782 -92024506 + MIR SINE MIR 47 231 -31 250 314 0 47 chr10 53564796 53564882 -92024406 - L2 LINE L2 0 3272 3191 693 104 264 7 chr10 53565022 53565128 -92024160 + L1MC3 LINE L1 6903 6981 -804 201 39 0 0 chr10 53565128 53565154 -92024134 + (TAAA)n Simple_repeat Simple_repeat 1 26 0 693 104 264 7 chr10 53565154 53565191 -92024097 + L1MC3 LINE L1 6981 7083 -702 334 281 26 0 chr10 53565766 53565919 -92023369 + MLT1A1 LTR MaLR 153 309 -56 1772 94 7 40 chr10 53566691 53566989 -92022299 - AluSc SINE Alu -21 288 1 665 298 55 55 chr10 53567597 53567943 -92021345 + L2 LINE L2 2425 2770 -544 374 359 23 8 chr10 53568117 53568245 -92021043 + MER5B DNA MER1_type 49 178 0 21 57 0 0 chr10 53570113 53570148 -92019140 + AT_rich Low_complexity Low_complexity 1 35 0 1780 99 0 16 chr10 53570416 53570687 -92018601 + AluSx SINE Alu 48 314 0 226 165 26 17 chr10 53571155 53571270 -92018018 + (TA)n Simple_repeat Simple_repeat 1 116 0 23 54 0 0 chr10 53571280 53571317 -92017971 + AT_rich Low_complexity Low_complexity 1 37 0 310 218 51 0 chr10 53571317 53571473 -92017815 + (TA)n Simple_repeat Simple_repeat 1 164 0 69 21 0 11 chr10 53571473 53571490 -92017798 + AT_rich Low_complexity Low_complexity 1 17 -76 1987 128 24 0 chr10 53571490 53571778 -92017510 - AluSq SINE Alu -18 295 1 69 21 0 11 chr10 53571778 53571854 -92017434 + AT_rich Low_complexity Low_complexity 17 93 0 1300 210 14 24 chr10 53571854 53572145 -92017143 - AluJo SINE Alu -24 288 1 259 266 0 0 chr10 53572192 53572256 -92017032 + MIR SINE MIR 168 231 -31 1389 179 4 4 chr10 53573079 53573325 -92015963 + MSTA LTR MaLR 1 246 -182 77 48 0 21 chr10 53573442 53573587 -92015701 + AT_rich Low_complexity Low_complexity 1 142 0 280 182 36 18 chr10 53573598 53573708 -92015580 + (TTATA)n Simple_repeat Simple_repeat 5 116 0 452 86 11 86 chr10 53573714 53573889 -92015399 + (TTTA)n Simple_repeat Simple_repeat 2 163 0 28 0 0 0 chr10 53573894 53573922 -92015366 + AT_rich Low_complexity Low_complexity 1 28 0 317 182 28 0 chr10 53573923 53574066 -92015222 + (TA)n Simple_repeat Simple_repeat 1 147 0 23 0 0 0 chr10 53574071 53574094 -92015194 + AT_rich Low_complexity Low_complexity 1 23 0 5046 105 25 2 chr10 53574094 53574804 -92014484 + L1PA8A LINE L1 4571 5263 -868 186 71 0 0 chr10 53574804 53574832 -92014456 + (CAA)n Simple_repeat Simple_repeat 3 30 0 5046 105 25 2 chr10 53574832 53575505 -92013783 + L1PA8A LINE L1 5263 5989 -142 459 141 14 0 chr10 53578718 53578789 -92010499 - MLT1D LTR MaLR -142 363 292 668 181 101 113 chr10 53579282 53579348 -92009940 - MIR SINE MIR -10 252 187 228 35 0 0 chr10 53579348 53579377 -92009911 + (ATTG)n Simple_repeat Simple_repeat 4 32 0 1483 163 21 43 chr10 53579377 53579659 -92009629 - AluJo SINE Alu -32 280 5 668 181 101 113 chr10 53579659 53579839 -92009449 - MIR SINE MIR -73 189 8 614 254 17 17 chr10 53579988 53580165 -92009123 + MER5B DNA MER1_type 1 177 -1 712 184 34 39 chr10 53580429 53580608 -92008680 - MER5B DNA MER1_type 0 178 1 201 319 43 14 chr10 53581952 53582021 -92007267 + MIR SINE MIR 107 177 -85 941 116 0 0 chr10 53582991 53583120 -92006168 + FLAM_C SINE Alu 1 129 -14 284 208 0 0 chr10 53583289 53583342 -92005946 + L2 LINE L2 3261 3313 0 233 248 114 19 chr10 53583349 53583454 -92005834 - MIR SINE MIR 0 262 148 510 319 72 12 chr10 53583469 53583720 -92005568 + LTR33 LTR ERVL 9 274 -247 293 326 38 22 chr10 53583746 53583930 -92005358 + LTR33 LTR ERVL 326 512 -9 284 271 31 21 chr10 53583939 53584035 -92005253 - MIR SINE MIR -120 142 46 496 349 39 13 chr10 53584099 53584331 -92004957 + MIR SINE MIR 9 246 -16 256 271 65 37 chr10 53585033 53585140 -92004148 - MER117 DNA MER1_type -87 110 1 522 207 50 39 chr10 53585376 53585581 -92003707 - MLT1H LTR MaLR -1 590 335 1984 123 23 7 chr10 53585844 53586145 -92003143 + AluSx SINE Alu 3 308 -4 431 257 0 18 chr10 53586368 53586481 -92002807 - MIR SINE MIR -73 189 79 24 91 0 0 chr10 53586583 53586649 -92002639 + AT_rich Low_complexity Low_complexity 1 66 0 687 202 24 18 chr10 53586946 53587114 -92002174 - FRAM SINE Alu -13 163 1 23 0 0 0 chr10 53587124 53587147 -92002141 + AT_rich Low_complexity Low_complexity 1 23 0 801 271 76 43 chr10 53587261 53588080 -92001208 - L1MCc LINE L1 -3379 3562 2770 944 279 98 41 chr10 53588175 53588636 -92000652 - L1MCc LINE L1 -4083 2859 2426 219 36 0 0 chr10 53588636 53588664 -92000624 + (TG)n Simple_repeat Simple_repeat 2 29 0 2735 89 6 0 chr10 53588664 53589023 -92000265 - THE1B LTR MaLR -3 361 1 944 279 98 41 chr10 53589023 53589626 -91999662 - L1MCc LINE L1 -4515 2427 1281 249 288 121 30 chr10 53590013 53590145 -91999143 - L1MCc LINE L1 -5924 1007 864 2346 89 3 0 chr10 53590195 53590497 -91998791 - AluSp SINE Alu -10 303 1 1930 137 11 108 chr10 53590821 53591200 -91998088 - Tigger3(Golem) DNA MER2_type -7 3022 1 268 279 0 0 chr10 53593248 53593309 -91995979 - MER90 LTR ERV1 -553 61 1 487 294 126 14 chr10 53594244 53594458 -91994830 + MIR SINE MIR 25 262 0 1691 217 35 72 chr10 53594659 53595171 -91994117 + MLT1D LTR MaLR 13 505 0 23 0 0 0 chr10 53596121 53596144 -91993144 + AT_rich Low_complexity Low_complexity 1 23 0 393 338 7 7 chr10 53597273 53597418 -91991870 + MIR SINE MIR 86 230 -32 23 33 0 0 chr10 53597674 53597704 -91991584 + AT_rich Low_complexity Low_complexity 1 30 0 369 289 81 29 chr10 53597836 53598009 -91991279 - L3 LINE CR1 -2 1575 1394 347 289 34 60 chr10 53598278 53598427 -91990861 + MIR SINE MIR 111 255 -7 573 299 106 43 chr10 53598904 53599327 -91989961 + L2 LINE L2 2067 2523 -791 1702 29 0 10 chr10 53599327 53599532 -91989756 - L1PA3 LINE L1 -3 6152 5950 573 299 106 43 chr10 53599532 53599570 -91989718 + L2 LINE L2 2523 2557 -757 558 274 22 71 chr10 53599717 53599942 -91989346 + L1MD2 LINE L1 6199 6359 0 258 426 30 10 chr10 53600090 53600287 -91989001 + L2 LINE L2 2871 3071 -201 223 260 0 115 chr10 53601006 53601102 -91988186 - MIR3 SINE MIR -3 205 121 402 301 129 16 chr10 53601897 53602090 -91987198 + MIR SINE MIR 47 261 -1 258 364 73 0 chr10 53602398 53602508 -91986780 - MER5A DNA MER1_type -7 182 65 829 146 36 0 chr10 53602508 53602673 -91986615 - L1MA7 LINE L1 -5 6286 6116 258 33 100 0 chr10 53602706 53602766 -91986522 + (TA)n Simple_repeat Simple_repeat 1 66 0 333 68 0 0 chr10 53603831 53603875 -91985413 + (TATG)n Simple_repeat Simple_repeat 3 46 0 880 103 0 0 chr10 53603875 53603991 -91985297 - AluSq/x SINE Alu -196 116 1 1967 99 0 31 chr10 53604518 53604810 -91984478 - AluSg1 SINE Alu -1 308 26 181 350 88 19 chr10 53605144 53605304 -91983984 - L2 LINE L2 -715 2599 2429 190 308 0 0 chr10 53605425 53605477 -91983811 + L2 LINE L2 3001 3052 -220 1727 128 110 7 chr10 53605981 53606262 -91983026 - AluSg SINE Alu 0 310 1 242 264 14 14 chr10 53607511 53607583 -91981705 + L1MC4a LINE L1 6063 6134 -1674 25 0 0 0 chr10 53607603 53607628 -91981660 + AT_rich Low_complexity Low_complexity 1 25 0 1756 156 0 33 chr10 53607633 53607934 -91981354 + AluSx SINE Alu 1 291 -21 268 301 14 0 chr10 53608224 53608297 -91980991 - MIR SINE MIR -113 149 76 2697 205 35 25 chr10 53608635 53609226 -91980062 - MLT1E3 LTR MaLR -2 622 26 26 64 0 0 chr10 53609349 53609396 -91979892 + AT_rich Low_complexity Low_complexity 1 47 0 21 36 0 0 chr10 53609570 53609598 -91979690 + AT_rich Low_complexity Low_complexity 1 28 0 2096 143 0 0 chr10 53609831 53610124 -91979164 + AluSx SINE Alu 1 293 -19 475 296 32 17 chr10 53610546 53610729 -91978559 - MIR SINE MIR -4 204 10 729 200 24 24 chr10 53611033 53611198 -91978090 - MER97c DNA MER1_type? -857 233 69 593 289 77 9 chr10 53611576 53611802 -91977486 + MIR SINE MIR 14 261 -1 411 278 139 0 chr10 53612193 53612337 -91976951 + MIR3 SINE MIR 34 197 -11 267 31 0 0 chr10 53613701 53613733 -91975555 + (CA)n Simple_repeat Simple_repeat 2 33 0 308 93 0 19 chr10 53614381 53614435 -91974853 + (CCG)n Simple_repeat Simple_repeat 2 54 0 222 264 299 0 chr10 53616025 53616112 -91973176 + L2 LINE L2 3192 3304 -9 4083 95 4 153 chr10 53616238 53617050 -91972238 + LTR12 LTR ERV1 1 691 -23 257 281 83 16 chr10 53617422 53617543 -91971745 + MER112 DNA MER1_type 1 129 -131 311 299 90 7 chr10 53617658 53617802 -91971486 - L1ME LINE L1 -519 5643 5488 462 238 106 65 chr10 53617834 53618175 -91971113 - L1ME4a LINE L1 -214 5907 5553 2757 22 0 0 chr10 53618470 53618781 -91970507 - AluY SINE Alu 0 311 1 26 30 0 0 chr10 53619074 53619107 -91970181 + AT_rich Low_complexity Low_complexity 1 33 0 425 282 9 9 chr10 53619162 53619272 -91970016 - MER5B DNA MER1_type -49 129 20 755 224 28 51 chr10 53619294 53619508 -91969780 - MER3 DNA MER1_type 0 209 1 199 255 20 0 chr10 53619579 53619630 -91969658 - L2 LINE L2 -6 3266 3215 25 75 0 0 chr10 53619708 53619761 -91969527 + AT_rich Low_complexity Low_complexity 1 53 0 1277 221 45 24 chr10 53620296 53620696 -91968592 + MLT2B1 LTR ERVL 22 478 -42 276 30 0 0 chr10 53620696 53620729 -91968559 + (CA)n Simple_repeat Simple_repeat 2 34 0 1277 221 45 24 chr10 53620729 53620773 -91968515 + MLT2B1 LTR ERVL 478 520 0 489 320 20 9 chr10 53621508 53621708 -91967580 + MIR SINE MIR 33 233 -29 21 0 0 0 chr10 53621947 53621968 -91967320 + AT_rich Low_complexity Low_complexity 1 21 0 467 281 213 38 chr10 53622133 53622602 -91966686 - L1MC4 LINE L1 0 8042 7492 533 233 36 90 chr10 53622657 53623037 -91966251 - L1MC4a LINE L1 -515 7293 7043 25 0 0 0 chr10 53624042 53624067 -91965221 + AT_rich Low_complexity Low_complexity 1 25 0 198 0 0 0 chr10 53624554 53624576 -91964712 + (TG)n Simple_repeat Simple_repeat 2 23 0 319 280 64 48 chr10 53625017 53625142 -91964146 - L2 LINE L2 -2 3270 3144 294 29 0 0 chr10 53625287 53625322 -91963966 + (GA)n Simple_repeat Simple_repeat 1 35 0 21 0 0 0 chr10 53626031 53626052 -91963236 + AT_rich Low_complexity Low_complexity 1 21 0 24 85 0 0 chr10 53626262 53626321 -91962967 + AT_rich Low_complexity Low_complexity 1 59 0 234 154 0 0 chr10 53626544 53626583 -91962705 + L1 LINE L1 4736 4774 -1372 1383 145 28 8 chr10 53626654 53626909 -91962379 - L1MB3 LINE L1 -1 6182 5923 263 120 60 0 chr10 53626910 53626960 -91962328 - MLT2A1 LTR ERVL -2 442 390 225 157 20 0 chr10 53626965 53627016 -91962272 - L1MC4 LINE L1 -1339 6703 6652 1282 94 33 6 chr10 53627054 53627234 -91962054 - MLT2A1 LTR ERVL -45 399 215 * 1746 76 42 30 chr10 53627231 53627493 -91961795 - MLT2A2 LTR ERVL -188 265 1 1935 166 0 0 chr10 53627493 53627824 -91961464 - L1MB3 LINE L1 -255 5928 5598 427 303 172 16 chr10 53627982 53628365 -91960923 + L1MC4a LINE L1 5446 5888 -1920 261 248 77 0 chr10 53628570 53628687 -91960601 - L1MA10 LINE L1 -2 6332 6207 198 0 0 0 chr10 53629066 53629088 -91960200 + (CA)n Simple_repeat Simple_repeat 1 22 0 944 191 67 24 chr10 53629182 53629391 -91959897 - MER20 DNA MER1_type 0 219 2 2173 125 3 3 chr10 53629934 53630246 -91959042 + AluSx SINE Alu 1 312 0 27 29 0 0 chr10 53630316 53630350 -91958938 + AT_rich Low_complexity Low_complexity 1 34 0 475 56 106 0 chr10 53630361 53630521 -91958767 + (TA)n Simple_repeat Simple_repeat 2 178 0 24 0 0 0 chr10 53630521 53630545 -91958743 + AT_rich Low_complexity Low_complexity 1 24 0 458 111 47 23 chr10 53630548 53630719 -91958569 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 255 51 102 0 chr10 53630719 53630778 -91958510 + (TA)n Simple_repeat Simple_repeat 2 66 0 2107 109 7 3 chr10 53632219 53632512 -91956776 - AluSc SINE Alu -15 294 1 264 100 0 0 chr10 53632634 53632674 -91956614 + (TC)n Simple_repeat Simple_repeat 1 40 0 2147 106 0 0 chr10 53632756 53633030 -91956258 - AluSg SINE Alu -30 280 7 225 0 0 0 chr10 53633720 53633745 -91955543 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 197 212 341 0 chr10 53633789 53633874 -91955414 - L3b LINE CR1 -116 1467 1354 378 0 0 0 chr10 53634083 53634125 -91955163 + (CA)n Simple_repeat Simple_repeat 2 43 0 192 158 0 0 chr10 53634303 53634341 -91954947 + T-rich Low_complexity Low_complexity 1 38 0 327 319 0 11 chr10 53634769 53634863 -91954425 + MIR SINE MIR 31 123 -85 24 0 0 0 chr10 53635604 53635628 -91953660 + AT_rich Low_complexity Low_complexity 1 24 0 1053 93 12 19 chr10 53636636 53636797 -91952491 + L1MA1 LINE L1 6143 6302 0 27 29 0 0 chr10 53636797 53636831 -91952457 + AT_rich Low_complexity Low_complexity 1 34 0 400 242 31 0 chr10 53637373 53637403 -91951885 - L1MA10 LINE L1 -23 6311 6282 6247 222 61 43 chr10 53637403 53640240 -91949048 - L1ME1 LINE L1 -47 6119 3239 1513 160 109 0 chr10 53640240 53640515 -91948773 - AluJb SINE Alu -5 307 3 6247 222 61 43 chr10 53640515 53640696 -91948592 - L1ME1 LINE L1 -2927 3239 3063 732 288 144 35 chr10 53640696 53641261 -91948027 + L2 LINE L2 2690 3313 0 517 281 23 41 chr10 53641766 53641937 -91947351 - MIR SINE MIR -7 255 88 31 44 0 0 chr10 53642349 53642394 -91946894 + AT_rich Low_complexity Low_complexity 1 45 0 1867 141 3 30 chr10 53642905 53643046 -91946242 + AluSx SINE Alu 1 144 -168 1982 131 7 7 chr10 53643046 53643390 -91945898 + AluSq SINE Alu 1 313 0 1867 141 3 30 chr10 53643390 53643552 -91945736 + AluSx SINE Alu 144 296 -16 955 244 94 92 chr10 53643708 53644360 -91944928 - HAL1 LINE L1 0 2507 1855 262 234 234 72 chr10 53644586 53644697 -91944591 - L2 LINE L2 -1 3271 3143 281 279 57 16 chr10 53645584 53645706 -91943582 - MER103 DNA DNA -38 128 2 555 181 0 0 chr10 53645938 53646032 -91943256 - MSTD LTR MaLR -301 95 2 246 176 0 0 chr10 53646122 53646173 -91943115 + (TATG)n Simple_repeat Simple_repeat 4 54 0 347 305 84 0 chr10 53648666 53648761 -91940527 + MER81 DNA DNA 1 103 -11 195 274 245 19 chr10 53649042 53649148 -91940140 + MIR SINE MIR 46 175 -87 21 36 0 0 chr10 53650189 53650217 -91939071 + AT_rich Low_complexity Low_complexity 1 28 0 1974 93 14 7 chr10 53650795 53651108 -91938180 + AluSc SINE Alu 1 315 0 189 107 0 0 chr10 53651697 53651725 -91937563 + (TCCC)n Simple_repeat Simple_repeat 3 30 0 206 179 51 0 chr10 53652102 53652141 -91937147 + G-rich Low_complexity Low_complexity 4 44 0 1879 147 0 35 chr10 53657087 53657406 -91931882 - AluSx SINE Alu -4 308 1 2286 64 4 4 chr10 53657457 53657792 -91931496 - AluY SINE Alu 0 335 1 225 0 0 0 chr10 53658556 53658581 -91930707 + (TG)n Simple_repeat Simple_repeat 2 26 0 2587 277 98 32 chr10 53659174 53659968 -91929320 - HAL1 LINE L1 -748 1759 849 186 43 0 0 chr10 53659968 53659991 -91929297 + (TG)n Simple_repeat Simple_repeat 2 24 0 2587 277 98 32 chr10 53659991 53660455 -91928833 - HAL1 LINE L1 -1658 849 417 1688 182 102 5 chr10 53660488 53660862 -91928426 - MER63B DNA MER1_type -26 410 1 800 302 92 23 chr10 53660863 53661254 -91928034 - HAL1 LINE L1 -2089 418 1 1344 187 48 86 chr10 53661351 53661747 -91927541 - MLT1A2 LTR MaLR 0 374 10 1807 183 7 0 chr10 53662631 53662932 -91926356 + AluJo SINE Alu 3 305 -7 358 299 34 7 chr10 53662936 53663083 -91926205 + HAL1 LINE L1 1311 1461 -1046 261 75 0 0 chr10 53663398 53663438 -91925850 + (TG)n Simple_repeat Simple_repeat 2 41 0 373 246 273 66 chr10 53663658 53663914 -91925374 - LTR16A1 LTR ERVL -4 453 145 584 270 89 36 chr10 53664494 53664835 -91924453 - MIR SINE MIR -29 233 1 1618 185 7 16 chr10 53665299 53665607 -91923681 + AluSq SINE Alu 1 305 -8 805 178 161 6 chr10 53665846 53666020 -91923268 - MER20 DNA MER1_type -18 201 1 799 261 37 14 chr10 53666056 53666274 -91923014 - MIR SINE MIR -38 224 2 335 291 149 7 chr10 53666274 53666401 -91922887 - MIR SINE MIR -113 149 3 220 353 101 8 chr10 53667609 53667728 -91921560 + MIR SINE MIR 20 149 -59 328 306 15 30 chr10 53667800 53667934 -91921354 + MIR SINE MIR 20 151 -111 236 250 18 0 chr10 53668273 53668329 -91920959 + MER46C DNA MER2_type 276 332 -6 25 31 0 0 chr10 53668592 53668624 -91920664 + AT_rich Low_complexity Low_complexity 1 32 0 194 289 244 0 chr10 53668759 53668915 -91920373 - L2 LINE L2 -18 3295 3102 306 0 0 0 chr10 53668989 53669023 -91920265 + (TG)n Simple_repeat Simple_repeat 2 35 0 435 137 41 20 chr10 53669023 53669169 -91920119 + (TA)n Simple_repeat Simple_repeat 1 149 0 913 216 11 0 chr10 53669517 53669702 -91919586 - MER5A DNA MER1_type 0 189 3 428 305 37 24 chr10 53670925 53671089 -91918199 + MIR SINE MIR 85 250 -12 942 231 24 8 chr10 53671365 53671620 -91917668 + L1MB8 LINE L1 5919 6177 -1 204 271 247 41 chr10 53672630 53672800 -91916488 - MIR SINE MIR -9 253 49 235 333 65 39 chr10 53672961 53673114 -91916174 + MIR SINE MIR 48 204 -58 289 337 59 30 chr10 53674022 53674191 -91915097 - L2 LINE L2 -22 3291 3118 1742 196 0 0 chr10 53674763 53675059 -91914229 + AluJb SINE Alu 1 296 -16 563 269 11 49 chr10 53675265 53675468 -91913820 + MIR SINE MIR 8 203 -59 345 47 0 0 chr10 53675497 53675540 -91913748 + (CAT)n Simple_repeat Simple_repeat 2 44 0 614 290 68 0 chr10 53676970 53677146 -91912142 + MIR SINE MIR 65 252 -10 299 259 52 69 chr10 53677287 53677403 -91911885 - L2 LINE L2 0 3313 3200 188 323 16 0 chr10 53677621 53677683 -91911605 - L2 LINE L2 -212 3060 2998 592 260 20 34 chr10 53677783 53677987 -91911301 + LTR16A LTR ERVL 27 227 -223 1955 171 58 6 chr10 53677988 53678333 -91910955 - MLT1A1 LTR MaLR 0 365 3 242 282 129 80 chr10 53678348 53678511 -91910777 + LTR16A LTR ERVL 239 409 -41 4497 143 17 6 chr10 53679354 53680068 -91909220 + L1MA3 LINE L1 719 1440 -6125 * 5924 130 18 43 chr10 53680058 53680457 -91908831 + L1MA3 LINE L1 5535 5942 -1782 2092 138 0 3 chr10 53680457 53680768 -91908520 + AluSg SINE Alu 1 310 0 5924 130 18 43 chr10 53680768 53680802 -91908486 + L1MA3 LINE L1 5942 5975 -1749 360 0 0 0 chr10 53680802 53680842 -91908446 + (CA)n Simple_repeat Simple_repeat 1 40 0 5924 130 18 43 chr10 53680842 53682037 -91907251 + L1MA3 LINE L1 5975 7119 -605 735 137 0 0 chr10 53682166 53682283 -91907005 - L1MA3 LINE L1 -10 6295 6179 3835 122 8 3 chr10 53682288 53682885 -91906403 + L1MA3 LINE L1 7115 7714 -10 2146 119 3 10 chr10 53683271 53683574 -91905714 - AluSx SINE Alu -11 301 1 1416 155 20 71 chr10 53683579 53683910 -91905378 - AluJo SINE Alu 0 316 1 196 261 0 0 chr10 53684217 53684263 -91905025 + MIR SINE MIR 211 256 -6 256 367 47 13 chr10 53684744 53684894 -91904394 - L2 LINE L2 0 3313 3159 243 0 0 0 chr10 53685174 53685201 -91904087 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 286 244 38 56 chr10 53685202 53685362 -91903926 + L1ME4a LINE L1 5954 6110 -11 250 362 69 0 chr10 53685423 53685539 -91903749 - L2 LINE L2 -17 3255 3132 522 293 73 16 chr10 53685800 53685991 -91903297 - MIR SINE MIR -60 202 1 271 206 29 29 chr10 53686131 53686199 -91903089 + L2 LINE L2 3244 3311 -2 379 35 35 0 chr10 53686371 53686428 -91902860 + (TA)n Simple_repeat Simple_repeat 2 60 0 273 276 65 57 chr10 53687595 53687718 -91901570 + MIR SINE MIR 8 131 -131 724 112 0 0 chr10 53688103 53688210 -91901078 + L1MA1 LINE L1 6187 6293 -9 29 28 0 0 chr10 53688210 53688246 -91901042 + AT_rich Low_complexity Low_complexity 1 36 0 180 0 0 0 chr10 53688305 53688325 -91900963 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1779 139 0 0 chr10 53688349 53688601 -91900687 - AluSx SINE Alu -59 253 2 386 272 124 72 chr10 53688625 53688890 -91900398 + HAL1 LINE L1 23 301 -2206 488 306 52 12 chr10 53689350 53689523 -91899765 + MIR SINE MIR 70 249 -13 2317 149 70 2 chr10 53690131 53690528 -91898760 - MSTB LTR MaLR -2 424 1 21 57 0 0 chr10 53690757 53690792 -91898496 + AT_rich Low_complexity Low_complexity 1 35 0 517 274 40 70 chr10 53691078 53691279 -91898009 - MIR SINE MIR -49 213 19 246 313 104 37 chr10 53691319 53691453 -91897835 - MIR SINE MIR -71 191 49 26 30 0 0 chr10 53692123 53692156 -91897132 + AT_rich Low_complexity Low_complexity 1 33 0 687 213 142 0 chr10 53693899 53694054 -91895234 + MER45A DNA AcHobo 2 178 0 304 303 84 14 chr10 53694148 53694290 -91894998 + MIR SINE MIR 105 256 -6 2977 131 11 13 chr10 53694786 53695253 -91894035 - MLT1C LTR MaLR 0 467 2 2202 112 135 23 chr10 53696124 53696509 -91892779 + MSTA LTR MaLR 1 428 0 207 266 165 37 chr10 53696540 53696649 -91892639 + MIR SINE MIR 100 222 -40 348 340 30 44 chr10 53697814 53698017 -91891271 - MIR3 SINE MIR -6 202 3 1254 132 0 0 chr10 53698054 53698236 -91891052 - AluSq SINE Alu -3 310 129 2295 117 0 0 chr10 53699098 53699407 -91889881 + AluSq SINE Alu 1 309 -4 201 94 0 0 chr10 53700022 53700054 -91889234 + (CA)n Simple_repeat Simple_repeat 2 33 0 266 172 31 31 chr10 53700350 53700414 -91888874 - L1M3 LINE L1 -490 5681 5627 524 235 0 60 chr10 53700415 53700564 -91888724 + FLAM_C SINE Alu 3 142 -1 2760 184 14 18 chr10 53700581 53701467 -91887821 - L1M3 LINE L1 -544 5639 4753 246 310 0 0 chr10 53702211 53702269 -91887019 + MIR SINE MIR 15 72 -190 513 222 48 43 chr10 53702321 53702528 -91886760 + L1MEc LINE L1 1443 1650 -4746 192 283 0 17 chr10 53702548 53702608 -91886680 + MIR SINE MIR 160 218 -44 1502 157 10 82 chr10 53702610 53702937 -91886351 + AluJb SINE Alu 6 310 0 215 366 97 8 chr10 53703294 53703428 -91885860 - L2 LINE L2 -6 3266 3121 427 258 17 90 chr10 53703687 53703760 -91885528 + MIR SINE MIR 80 157 -105 2110 118 17 0 chr10 53703760 53704057 -91885231 + AluSc SINE Alu 1 302 -7 427 258 17 90 chr10 53704057 53704161 -91885127 + MIR SINE MIR 157 244 -18 193 224 26 79 chr10 53704393 53704469 -91884819 + L3 LINE CR1 663 734 -843 219 98 24 24 chr10 53704673 53704714 -91884574 + L2 LINE L2 3019 3059 -213 2193 127 0 0 chr10 53704822 53705122 -91884166 - AluSq SINE Alu -13 300 1 314 205 13 13 chr10 53705991 53706069 -91883219 - L1MA7 LINE L1 -15 6276 6199 2108 115 0 7 chr10 53707037 53707325 -91881963 + AluSc SINE Alu 1 286 -23 395 228 73 16 chr10 53707454 53707577 -91881711 - MIR SINE MIR -37 225 96 700 366 77 19 chr10 53707637 53708102 -91881186 + L2 LINE L2 2808 3299 -14 192 77 0 0 chr10 53708103 53708129 -91881159 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 233 355 48 30 chr10 53708220 53708386 -91880902 + L3 LINE CR1 1407 1575 -2 322 296 102 34 chr10 53708395 53708571 -91880717 - L3 LINE CR1 -94 1483 1296 2101 130 74 9 chr10 53708579 53708917 -91880371 + THE1B LTR MaLR 3 362 -2 540 176 16 150 chr10 53709308 53709501 -91879787 + MER20 DNA MER1_type 3 169 -50 1504 260 100 59 chr10 53709597 53710348 -91878940 + MER20B DNA MER1_type 1 782 -1 422 299 7 7 chr10 53710350 53710487 -91878801 - L3 LINE CR1 -802 775 639 21 0 0 0 chr10 53711090 53711111 -91878177 + AT_rich Low_complexity Low_complexity 1 21 0 1576 236 36 8 chr10 53712017 53712406 -91876882 + MLT1C LTR MaLR 68 467 0 303 303 8 76 chr10 53712461 53712593 -91876695 + MER5A DNA MER1_type 67 189 0 262 244 83 117 chr10 53712719 53712899 -91876389 + MIR SINE MIR 89 262 0 323 294 183 0 chr10 53713059 53713185 -91876103 - MIR SINE MIR -110 152 4 384 204 148 93 chr10 53713414 53713482 -91875806 + MER5A DNA MER1_type 18 81 -108 2215 101 0 26 chr10 53713482 53713790 -91875498 + AluSg SINE Alu 1 300 -10 384 204 148 93 chr10 53713790 53713883 -91875405 + MER5A DNA MER1_type 81 188 -1 365 294 0 0 chr10 53714284 53714386 -91874902 - MIR SINE MIR 0 262 161 26 0 0 0 chr10 53715438 53715464 -91873824 + AT_rich Low_complexity Low_complexity 1 26 0 214 45 45 23 chr10 53716224 53716268 -91873020 + (TTTTG)n Simple_repeat Simple_repeat 1 180 0 2012 116 18 0 chr10 53716268 53716545 -91872743 - AluSp SINE Alu -31 282 1 494 231 154 45 chr10 53716645 53716931 -91872357 + L1MC4a LINE L1 5614 5930 -1878 414 0 0 0 chr10 53717515 53717561 -91871727 + (TTG)n Simple_repeat Simple_repeat 2 47 0 25 65 0 0 chr10 53718284 53718330 -91870958 + AT_rich Low_complexity Low_complexity 1 46 0 2209 121 0 13 chr10 53722014 53722328 -91866960 - AluSx SINE Alu -2 310 1 21 0 0 0 chr10 53722384 53722405 -91866883 + AT_rich Low_complexity Low_complexity 1 21 0 520 269 104 35 chr10 53724432 53724633 -91864655 + MIR SINE MIR 5 219 -43 2149 135 45 18 chr10 53725716 53726050 -91863238 + MER2 DNA MER2_type 2 344 0 1137 29 0 7 chr10 53726253 53726392 -91862896 + AluY SINE Alu 170 307 -4 25 51 0 0 chr10 53729047 53729086 -91860202 + GC_rich Low_complexity Low_complexity 1 39 0 1963 198 30 48 chr10 53829497 53830099 -91759189 + L1MA8 LINE L1 5697 6287 -4 336 278 58 34 chr10 53830159 53830337 -91758951 - MIR SINE MIR -46 216 29 195 125 0 0 chr10 53830398 53830438 -91758850 + (TC)n Simple_repeat Simple_repeat 1 40 0 27 0 0 0 chr10 53832874 53832901 -91756387 + AT_rich Low_complexity Low_complexity 1 27 0 1991 125 3 7 chr10 53832902 53833191 -91756097 - AluSx SINE Alu -24 288 1 411 89 0 0 chr10 53833426 53833482 -91755806 - MADE1 DNA Mariner 0 80 25 2940 156 21 8 chr10 53833642 53834468 -91754820 - L1M2 LINE L1 -522 5778 4939 266 286 22 55 chr10 53834581 53834672 -91754616 + MIR SINE MIR 28 115 -147 233 159 14 43 chr10 53834760 53834829 -91754459 + (TAA)n Simple_repeat Simple_repeat 1 67 0 21 36 0 0 chr10 53835247 53835275 -91754013 + AT_rich Low_complexity Low_complexity 1 28 0 1764 143 68 16 chr10 53836125 53836205 -91753083 - L1M1 LINE L1 -687 5613 5539 1697 85 18 75 chr10 53836205 53836487 -91752801 + AluY SINE Alu 36 301 -10 1764 143 68 16 chr10 53836487 53836703 -91752585 - L1M1 LINE L1 -761 5539 5335 216 0 0 0 chr10 53836703 53836727 -91752561 + (TTA)n Simple_repeat Simple_repeat 2 25 0 1764 143 68 16 chr10 53836727 53837057 -91752231 - L1M1 LINE L1 -965 5335 4950 629 141 31 4 chr10 53837055 53837174 -91752114 + L1M1 LINE L1 5622 5741 -430 * 21 0 0 0 chr10 53837395 53837416 -91751872 + AT_rich Low_complexity Low_complexity 1 21 0 198 419 43 9 chr10 53838419 53838629 -91750659 + L2 LINE L2 2876 3092 -180 326 178 0 41 chr10 53838704 53838777 -91750511 - MIR SINE MIR -72 190 121 249 256 128 35 chr10 53838770 53838856 -91750432 + L2 LINE L2 3175 3268 -4 * 293 261 167 29 chr10 53838931 53839069 -91750219 + MIR SINE MIR 50 206 -56 195 216 0 0 chr10 53839268 53839305 -91749983 - L2 LINE L2 -5 3308 3272 661 201 118 0 chr10 53839393 53839537 -91749751 - MER5A DNA MER1_type -25 164 4 213 154 0 0 chr10 53839887 53839926 -91749362 + (TG)n Simple_repeat Simple_repeat 2 40 0 459 276 0 0 chr10 53840605 53840703 -91748585 - MER63 DNA MER1_type -287 773 676 228 288 59 17 chr10 53840893 53841011 -91748277 - MIR SINE MIR -41 221 99 685 181 58 0 chr10 53841020 53841175 -91748113 - L1MA8 LINE L1 0 6291 6128 30 27 0 0 chr10 53841286 53841323 -91747965 + AT_rich Low_complexity Low_complexity 1 37 0 275 49 24 0 chr10 53841788 53841829 -91747459 + (CA)n Simple_repeat Simple_repeat 2 43 0 303 323 0 21 chr10 53842534 53842627 -91746661 + L1MC4 LINE L1 6613 6703 -1339 21 0 0 0 chr10 53843367 53843388 -91745900 + AT_rich Low_complexity Low_complexity 1 21 0 398 304 116 49 chr10 53843605 53843951 -91745337 + MLT1J LTR MaLR 143 511 0 1160 299 27 51 chr10 53844009 53844521 -91744767 + L2 LINE L2 2393 2892 -422 1985 195 29 3 chr10 53845449 53845833 -91743455 + MSTD LTR MaLR 3 396 0 1540 83 0 9 chr10 53846043 53846259 -91743029 + L1PA7 LINE L1 5941 6154 0 370 274 35 99 chr10 53847051 53847252 -91742036 - MER5A DNA MER1_type 0 189 2 268 366 20 94 chr10 53847371 53847573 -91741715 + L2 LINE L2 2989 3175 -97 195 129 0 0 chr10 53847608 53847639 -91741649 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 301 257 114 19 chr10 53848088 53848193 -91741095 - MIR3 SINE MIR -7 201 87 678 233 108 9 chr10 53848695 53848918 -91740370 + MIR SINE MIR 5 249 -13 193 211 53 0 chr10 53849015 53849053 -91740235 - L2 LINE L2 -17 3296 3257 * 717 263 76 10 chr10 53849020 53849218 -91740070 - MIR SINE MIR -18 244 34 282 351 54 38 chr10 53849627 53849812 -91739476 - MIR SINE MIR -70 192 5 398 349 64 23 chr10 53850498 53850716 -91738572 + MIR SINE MIR 36 262 0 21 71 0 0 chr10 53850737 53850779 -91738509 + AT_rich Low_complexity Low_complexity 1 42 0 243 108 0 0 chr10 53850849 53850886 -91738402 + L2 LINE L2 3276 3312 -1 22 35 0 0 chr10 53853419 53853448 -91735840 + AT_rich Low_complexity Low_complexity 1 29 0 348 24 0 0 chr10 53853500 53853541 -91735747 + (TA)n Simple_repeat Simple_repeat 1 41 0 31 0 0 0 chr10 53854209 53854240 -91735048 + AT_rich Low_complexity Low_complexity 1 31 0 241 256 13 26 chr10 53854248 53854326 -91734962 + HAL1b LINE L1 90 166 -1182 453 236 42 115 chr10 53854539 53854827 -91734461 + L1ME4a LINE L1 5602 5868 -253 359 288 98 0 chr10 53855182 53855335 -91733953 - MIR SINE MIR -3 259 92 368 280 30 45 chr10 53856448 53856648 -91732640 + MER117 DNA MER1_type 1 197 0 335 290 50 0 chr10 53856882 53856982 -91732306 + MIR SINE MIR 86 190 -72 612 197 29 15 chr10 53858727 53858864 -91730424 + MIR SINE MIR 113 251 -11 2872 6 0 0 chr10 53858955 53859271 -91730017 + AluYb8 SINE Alu 1 316 -2 21 71 0 0 chr10 53859467 53859509 -91729779 + AT_rich Low_complexity Low_complexity 1 42 0 495 352 34 13 chr10 53860515 53860751 -91728537 - MIR SINE MIR -11 251 11 1716 161 10 7 chr10 53861847 53862139 -91727149 - AluJb SINE Alu -19 293 1 234 283 0 0 chr10 53863101 53863154 -91726134 - FAM SINE Alu -75 100 48 704 217 58 54 chr10 53863196 53863472 -91725816 + L2 LINE L2 2863 3139 -174 297 0 0 0 chr10 53863479 53863512 -91725776 + (TG)n Simple_repeat Simple_repeat 2 34 0 203 326 22 22 chr10 53863656 53863745 -91725543 + L2 LINE L2 3146 3234 -79 327 328 26 26 chr10 53864142 53864258 -91725030 - MIR SINE MIR -126 136 21 1955 201 88 2 chr10 53865345 53865823 -91723465 - Charlie1b DNA MER1_type -4 519 1 762 292 156 37 chr10 53866108 53866968 -91722320 + L2 LINE L2 2348 3312 -1 21 0 0 0 chr10 53867295 53867316 -91721972 + AT_rich Low_complexity Low_complexity 1 21 0 18047 43 2 3 chr10 53868198 53870547 -91718741 - L1P LINE L1 -3808 2338 1 953 138 0 0 chr10 53870759 53870904 -91718384 - AluSp/q SINE Alu -9 304 160 1343 215 11 4 chr10 53870937 53871211 -91718077 + AluJo SINE Alu 11 286 -26 23 33 0 0 chr10 53871212 53871242 -91718046 + AT_rich Low_complexity Low_complexity 1 30 0 645 267 49 30 chr10 53872695 53872961 -91716327 + MARNA DNA Mariner 245 515 -71 321 68 0 0 chr10 53873026 53873070 -91716218 + (CA)n Simple_repeat Simple_repeat 2 45 0 673 274 56 35 chr10 53873258 53873689 -91715599 + L1ME LINE L1 5396 5837 -284 466 333 141 36 chr10 53873893 53874304 -91714984 - L3 LINE CR1 -70 1507 1054 21 0 0 0 chr10 53875116 53875137 -91714151 + AT_rich Low_complexity Low_complexity 1 21 0 516 290 49 6 chr10 53875626 53875809 -91713479 + MIR SINE MIR 72 262 0 1311 140 4 4 chr10 53875835 53876063 -91713225 + L1MA5A LINE L1 6063 6290 -7 23 0 0 0 chr10 53876081 53876104 -91713184 + AT_rich Low_complexity Low_complexity 1 23 0 25 75 0 0 chr10 53877180 53877233 -91712055 + AT_rich Low_complexity Low_complexity 1 53 0 1966 146 62 11 chr10 53877584 53877621 -91711667 + ERVL-D LTR ERVL 5383 5417 -347 210 37 0 0 chr10 53877621 53877648 -91711640 + (TG)n Simple_repeat Simple_repeat 1 27 0 1966 146 62 11 chr10 53877648 53877967 -91711321 + ERVL-D LTR ERVL 5417 5757 -7 1543 179 84 57 chr10 53877971 53878374 -91710914 + MLT2D LTR ERVL 1 414 0 777 268 19 67 chr10 53878374 53878643 -91710645 + MIR SINE MIR 7 262 0 992 152 86 43 chr10 53879485 53879695 -91709593 - MER20 DNA MER1_type 0 219 1 210 264 64 0 chr10 53879710 53879777 -91709511 - MIR SINE MIR -58 150 79 250 333 17 17 chr10 53881249 53881366 -91707922 + L2 LINE L2 3161 3277 -36 22 0 0 0 chr10 53881960 53881982 -91707306 + AT_rich Low_complexity Low_complexity 1 22 0 340 207 54 9 chr10 53882217 53882328 -91706960 + L1ME4a LINE L1 5785 5900 -221 192 40 0 0 chr10 53882366 53882391 -91706897 + (CAAAAA)n Simple_repeat Simple_repeat 2 26 0 183 80 0 0 chr10 53882792 53882817 -91706471 + (T)n Simple_repeat Simple_repeat 1 25 0 21 0 0 0 chr10 53883882 53883903 -91705385 + AT_rich Low_complexity Low_complexity 1 21 0 651 195 76 81 chr10 53884034 53884244 -91705044 + MER63A DNA MER1_type 2 210 0 521 294 67 69 chr10 53884709 53885012 -91704276 - L2 LINE L2 -233 3080 2778 2627 151 32 4 chr10 53886510 53886975 -91702313 - L1MA5 LINE L1 0 6300 5823 537 157 0 2 chr10 53887135 53887320 -91701968 + AluJo SINE Alu 77 293 -9 * 1788 183 43 18 chr10 53887316 53887714 -91701574 + Cheshire DNA MER1_type 2012 2419 -1 703 257 104 38 chr10 53887719 53888007 -91701281 - MLT1I LTR MaLR -65 344 38 4743 21 0 6 chr10 53888290 53888814 -91700474 - SVA Other Other -156 1230 710 288 255 29 0 chr10 53888998 53889100 -91700188 + CT-rich Low_complexity Low_complexity 3 107 0 263 272 25 25 chr10 53889107 53889188 -91700100 + C-rich Low_complexity Low_complexity 4 84 0 1696 219 99 45 chr10 53889316 53889831 -91699457 + MER21B LTR ERV1 321 863 0 285 162 15 15 chr10 53889948 53890016 -91699272 - MER116 DNA Mariner -12 68 1 405 312 113 21 chr10 53890579 53891069 -91698219 - L2 LINE L2 -255 3058 2520 1479 236 76 16 chr10 53891072 53891505 -91697783 + MLT1C LTR MaLR 1 459 -8 520 277 32 27 chr10 53891952 53892140 -91697148 - MLT1B LTR MaLR -201 189 1 286 333 108 0 chr10 53892293 53892395 -91696893 - FLAM_C SINE Alu -17 116 4 1726 214 88 10 chr10 53893244 53893750 -91695538 - MLT1F LTR MaLR -3 539 6 255 318 88 47 chr10 53894068 53894150 -91695138 + MLT1L LTR MaLR 120 197 -418 545 123 297 77 chr10 53894150 53894228 -91695060 - MER5A DNA MER1_type 0 189 129 1758 85 0 0 chr10 53894228 53894452 -91694836 - AluSg/x SINE Alu -4 306 83 545 123 297 77 chr10 53894452 53894528 -91694760 - MER5A DNA MER1_type -60 129 1 255 318 88 47 chr10 53894528 53894719 -91694569 + MLT1L LTR MaLR 197 404 -211 24 0 0 0 chr10 53895233 53895257 -91694031 + AT_rich Low_complexity Low_complexity 1 24 0 218 205 0 0 chr10 53895367 53895406 -91693882 + (CATATA)n Simple_repeat Simple_repeat 2 40 0 2026 128 3 0 chr10 53895406 53895688 -91693600 - AluSx SINE Alu -27 285 3 22 0 0 0 chr10 53896034 53896056 -91693232 + AT_rich Low_complexity Low_complexity 1 22 0 3217 32 0 0 chr10 53896056 53896433 -91692855 - L1PA3 LINE L1 -3 6152 5776 235 253 49 38 chr10 53896433 53896571 -91692717 - MIR SINE MIR -66 142 10 319 376 73 11 chr10 53897594 53897772 -91691516 - MIR SINE MIR -72 190 2 28 0 0 0 chr10 53898704 53898732 -91690556 + AT_rich Low_complexity Low_complexity 1 28 0 546 270 199 14 chr10 53898817 53899028 -91690260 - MIR SINE MIR -11 251 2 409 349 41 10 chr10 53899877 53900072 -91689216 + MIR SINE MIR 61 261 -1 1022 238 303 17 chr10 53900216 53900801 -91688487 - LTR50 LTR ERVL -43 752 1 4891 151 6 25 chr10 53900846 53901826 -91687462 + L1PB4 LINE L1 5180 6142 -14 239 358 155 34 chr10 53901910 53902117 -91687171 - L2 LINE L2 -8 3264 3033 24 0 0 0 chr10 53902181 53902205 -91687083 + AT_rich Low_complexity Low_complexity 1 24 0 304 273 64 18 chr10 53902296 53902406 -91686882 - L2 LINE L2 -21 3292 3178 212 329 29 138 chr10 53902691 53902931 -91686357 + L2 LINE L2 3002 3215 -57 2149 117 3 3 chr10 53903447 53903756 -91685532 - AluSp SINE Alu -4 309 1 257 50 0 25 chr10 53904655 53904695 -91684593 + (TG)n Simple_repeat Simple_repeat 1 39 0 1009 211 82 45 chr10 53905234 53905565 -91683723 + MER2 DNA MER2_type 1 343 -1 189 309 0 0 chr10 53907218 53907260 -91682028 - MIR SINE MIR -156 106 65 2186 103 0 3 chr10 53907991 53908308 -91680980 + AluSg SINE Alu 5 310 0 293 377 33 0 chr10 53909673 53909795 -91679493 + L2 LINE L2 3187 3312 -1 390 278 0 0 chr10 53909903 53909993 -91679295 + MIR SINE MIR 134 223 -39 25 31 0 0 chr10 53912651 53912683 -91676605 + AT_rich Low_complexity Low_complexity 1 32 0 531 305 89 9 chr10 53912755 53912968 -91676320 + MIR SINE MIR 23 252 -10 2799 97 35 2 chr10 53913074 53913497 -91675791 + L1MA2 LINE L1 5868 6304 0 494 219 78 0 chr10 53913557 53913685 -91675603 - MER33 DNA MER1_type -186 138 1 403 261 12 109 chr10 53914507 53914672 -91674616 - MIR SINE MIR -10 252 104 424 319 34 26 chr10 53914962 53915173 -91674115 + MIR SINE MIR 11 261 -1 1402 174 85 25 chr10 53915273 53915554 -91673734 + AluJo SINE Alu 1 298 -14 5185 157 30 26 chr10 53915556 53916052 -91673236 - L1MA4 LINE L1 -11 6289 5796 2042 46 70 49 chr10 53916052 53916336 -91672952 + AluY SINE Alu 1 290 -21 5185 157 30 26 chr10 53916336 53916847 -91672441 - L1MA4 LINE L1 -504 5796 5278 729 117 0 0 chr10 53916847 53916950 -91672338 - AluSx SINE Alu -12 300 198 1027 104 0 0 chr10 53916950 53917085 -91672203 - AluSx SINE Alu -177 135 1 1021 212 18 0 chr10 53917105 53917331 -91671957 - L1MA4 LINE L1 -894 5252 5023 2026 143 0 7 chr10 53918719 53919019 -91670269 + AluSx SINE Alu 1 298 -14 22 35 0 0 chr10 53919060 53919089 -91670199 + AT_rich Low_complexity Low_complexity 1 29 0 3502 134 15 49 chr10 53919090 53919114 -91670174 - L1MA8 LINE L1 -10 6281 6258 1815 203 12 3 chr10 53919114 53919459 -91669829 - MER7A DNA MER2_type 0 346 1 3502 134 15 49 chr10 53919459 53920433 -91668855 - L1MA8 LINE L1 -33 6258 5319 21 36 0 0 chr10 53920450 53920478 -91668810 + AT_rich Low_complexity Low_complexity 1 28 0 3514 218 29 6 chr10 53920502 53921292 -91667996 - L1P LINE L1 -817 5329 4522 4057 163 18 6 chr10 53921292 53922015 -91667273 - Tigger1 DNA MER2_type -699 1719 988 220 383 92 0 chr10 53922517 53922637 -91666651 - L2 LINE L2 -3 3269 3139 669 301 106 28 chr10 53922645 53923080 -91666208 + LTR33 LTR ERVL 1 469 -52 180 367 71 29 chr10 53923231 53923441 -91665847 - L2 LINE L2 -233 3039 2821 216 384 27 20 chr10 53923668 53923814 -91665474 + L2 LINE L2 3159 3305 -8 1944 135 31 0 chr10 53924340 53924629 -91664659 + AluSq SINE Alu 4 301 -12 1558 211 28 14 chr10 53924708 53925068 -91664220 + MLT1A1 LTR MaLR 1 365 0 1023 279 27 81 chr10 53925208 53925691 -91663597 + LTR16A1 LTR ERVL 1 457 0 302 345 154 16 chr10 53925866 53926185 -91663103 - L2 LINE L2 -376 2938 2576 186 43 0 0 chr10 53926248 53926271 -91663017 + (GA)n Simple_repeat Simple_repeat 2 24 0 372 354 79 0 chr10 53926765 53926929 -91662359 + MIR SINE MIR 29 205 -57 306 0 0 0 chr10 53927526 53927560 -91661728 + (TG)n Simple_repeat Simple_repeat 2 35 0 199 402 61 12 chr10 53928100 53928264 -91661024 + L2 LINE L2 2891 3062 -210 2006 131 10 0 chr10 53928286 53928591 -91660697 - AluSx SINE Alu 0 312 5 1929 104 14 14 chr10 53928691 53928971 -91660317 - AluSq SINE Alu -12 301 22 2315 80 0 10 chr10 53929368 53929668 -91659620 + AluSg1 SINE Alu 1 297 -12 22 0 0 0 chr10 53930655 53930677 -91658611 + AT_rich Low_complexity Low_complexity 1 22 0 22008 30 2 1 chr10 53933213 53936636 -91652652 + L1PA4 LINE L1 2728 6153 -2 192 97 0 0 chr10 53936916 53936947 -91652341 + (TG)n Simple_repeat Simple_repeat 1 31 0 601 268 88 69 chr10 53937604 53937649 -91651639 - MLT1I LTR MaLR -3 406 363 1314 186 28 24 chr10 53937649 53937939 -91651349 - AluJo SINE Alu -19 293 3 601 268 88 69 chr10 53937939 53938255 -91651033 - MLT1I LTR MaLR -46 363 38 563 297 74 18 chr10 53938981 53939210 -91650078 - L2 LINE L2 -160 3153 2912 249 281 0 0 chr10 53939248 53939312 -91649976 + L2 LINE L2 3209 3272 0 227 319 118 7 chr10 53939401 53939536 -91649752 - MIR SINE MIR -3 259 110 856 258 36 40 chr10 53939543 53939795 -91649493 + MIR SINE MIR 11 261 -1 209 286 65 26 chr10 53939827 53939904 -91649384 - L2 LINE L2 -201 3071 2992 378 140 11 21 chr10 53941649 53941742 -91647546 + (TA)n Simple_repeat Simple_repeat 2 93 0 207 246 0 0 chr10 53941987 53942044 -91647244 + GA-rich Low_complexity Low_complexity 3 59 0 402 290 14 16 chr10 53942044 53942189 -91647099 + MIR SINE MIR 19 162 -46 22 56 0 0 chr10 53942238 53942274 -91647014 + AT_rich Low_complexity Low_complexity 1 36 0 193 253 13 67 chr10 53942417 53942492 -91646796 - L2 LINE L2 -9 3304 3234 2214 102 0 16 chr10 53942586 53942900 -91646388 + AluSg SINE Alu 1 309 -1 1256 224 126 50 chr10 53943017 53943573 -91645715 + MLT1E2 LTR MaLR 1 654 0 21 36 0 0 chr10 53944310 53944338 -91644950 + AT_rich Low_complexity Low_complexity 1 28 0 2024 118 6 34 chr10 53945022 53945344 -91643944 - AluSq SINE Alu 0 313 1 1283 164 5 129 chr10 53945986 53946382 -91642906 - L1MA9 LINE L1 0 6312 5966 22 70 0 0 chr10 53946424 53946467 -91642821 + AT_rich Low_complexity Low_complexity 1 43 0 25 0 0 0 chr10 53946846 53946871 -91642417 + AT_rich Low_complexity Low_complexity 1 25 0 1605 211 16 25 chr10 53948206 53948570 -91640718 - MLT1A1 LTR MaLR 0 365 5 22 0 0 0 chr10 53948805 53948827 -91640461 + AT_rich Low_complexity Low_complexity 1 22 0 1840 166 3 7 chr10 53949081 53949388 -91639900 + AluSx SINE Alu 2 307 -5 475 338 132 31 chr10 53949437 53949854 -91639434 + L3 LINE CR1 299 757 -820 368 353 50 29 chr10 53949874 53950115 -91639173 + L3 LINE CR1 1233 1478 -99 246 132 29 15 chr10 53950290 53950358 -91638930 + (TA)n Simple_repeat Simple_repeat 1 69 0 187 259 86 0 chr10 53950410 53950468 -91638820 + L2 LINE L2 3210 3272 0 378 352 76 68 chr10 53952052 53952447 -91636841 + L2 LINE L2 2875 3272 0 232 292 66 66 chr10 53952641 53952778 -91636510 + MIR SINE MIR 13 149 -113 1737 175 16 10 chr10 53952805 53953113 -91636175 + AluJb SINE Alu 1 310 -2 269 279 106 0 chr10 53953209 53953313 -91635975 + L1MC/D LINE L1 5681 5795 -2013 2017 154 23 26 chr10 53953715 53954060 -91635228 + MER2 DNA MER2_type 1 344 0 184 318 0 0 chr10 53957251 53957295 -91631993 + MIR SINE MIR 81 124 -138 825 152 146 0 chr10 53959087 53959252 -91630036 - MER5A DNA MER1_type 0 189 1 305 224 24 24 chr10 53959287 53959372 -91629916 + MIR SINE MIR 83 167 -95 2240 104 7 10 chr10 53959664 53959962 -91629326 - AluSg SINE Alu -13 297 1 2172 114 3 7 chr10 53961457 53961765 -91627523 + AluSq SINE Alu 1 307 -6 1156 120 12 0 chr10 53961768 53961935 -91627353 + AluSg/x SINE Alu 130 298 -14 32 26 0 0 chr10 53962054 53962093 -91627195 + AT_rich Low_complexity Low_complexity 1 39 0 673 303 66 12 chr10 53962890 53963131 -91626157 + MIR SINE MIR 7 260 -2 576 251 87 43 chr10 53964142 53964349 -91624939 - MIR SINE MIR -10 252 37 287 250 26 172 chr10 53964512 53964704 -91624584 - MIR3 SINE MIR -3 205 42 354 257 90 69 chr10 53965639 53965783 -91623505 - L2 LINE L2 -4 3268 3122 449 371 105 35 chr10 53965805 53966346 -91622942 + L3 LINE CR1 89 667 -910 417 299 29 7 chr10 53966346 53966483 -91622805 - LTR33 LTR ERVL 0 521 382 239 275 116 0 chr10 53966845 53966914 -91622374 + L3 LINE CR1 447 523 -1054 21 0 0 0 chr10 53967300 53967321 -91621967 + AT_rich Low_complexity Low_complexity 1 21 0 214 325 52 26 chr10 53968697 53968774 -91620514 - L2 LINE L2 -32 3240 3162 860 178 82 34 chr10 53969537 53969745 -91619543 + MER58A DNA MER1_type 7 224 0 337 282 39 0 chr10 53970743 53970846 -91618442 + L2 LINE L2 3205 3311 -2 23 33 0 0 chr10 53971542 53971572 -91617716 + AT_rich Low_complexity Low_complexity 1 30 0 26 64 0 0 chr10 53972207 53972254 -91617034 + AT_rich Low_complexity Low_complexity 1 47 0 381 270 70 17 chr10 53972879 53972994 -91616294 - L2 LINE L2 -5 3308 3188 248 293 13 13 chr10 53974033 53974108 -91615180 - MIR SINE MIR -90 172 98 198 0 0 0 chr10 53975320 53975342 -91613946 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 324 348 116 17 chr10 53975805 53976038 -91613250 + MIR SINE MIR 7 262 0 21 82 0 0 chr10 53978286 53978335 -91610953 + AT_rich Low_complexity Low_complexity 1 49 0 184 220 180 0 chr10 53978489 53978539 -91610749 - L3 LINE CR1 -2 1575 1517 367 224 24 80 chr10 53978546 53978671 -91610617 - MLT1L LTR MaLR -4 611 494 236 177 16 48 chr10 53979053 53979115 -91610173 - MIR3 SINE MIR -40 168 109 29 28 0 0 chr10 53980131 53980167 -91609121 + AT_rich Low_complexity Low_complexity 1 36 0 256 211 35 0 chr10 53980525 53980582 -91608706 + L2 LINE L2 3250 3308 -5 698 301 149 39 chr10 53980592 53981103 -91608185 - MLT1K LTR MaLR -4 584 18 272 200 0 50 chr10 53981854 53981914 -91607374 + MIR SINE MIR 204 260 -2 186 240 0 0 chr10 53982312 53982362 -91606926 + (TA)n Simple_repeat Simple_repeat 1 50 0 384 285 29 47 chr10 53982516 53982622 -91606666 - MIR SINE MIR -12 250 147 2312 103 0 6 chr10 53982622 53982933 -91606355 - AluSq SINE Alu -4 309 1 384 285 29 47 chr10 53982933 53982998 -91606290 - MIR SINE MIR -115 147 82 210 191 0 0 chr10 53983163 53983205 -91606083 + (CATATA)n Simple_repeat Simple_repeat 2 43 0 23 0 0 0 chr10 53983587 53983610 -91605678 + AT_rich Low_complexity Low_complexity 1 23 0 670 281 77 71 chr10 53984876 53985039 -91604249 - MER102b DNA MER1_type -1087 341 181 2529 49 0 7 chr10 53985039 53985343 -91603945 - AluY SINE Alu -9 302 1 670 281 77 71 chr10 53985343 53985503 -91603785 - MER102b DNA MER1_type -1247 181 16 1772 164 131 13 chr10 53985732 53986115 -91603173 - MSTA LTR MaLR 0 428 1 207 0 0 0 chr10 53986501 53986524 -91602764 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 563 299 72 62 chr10 53987867 53988368 -91600920 - MARNA DNA Mariner -18 568 63 793 150 48 37 chr10 53988462 53988649 -91600639 - MER53 DNA DNA 0 189 1 242 0 61 0 chr10 53988673 53988706 -91600582 + (TTTTA)n Simple_repeat Simple_repeat 5 39 0 297 345 51 59 chr10 53988924 53989092 -91600196 - L2 LINE L2 -238 3034 2866 832 228 16 5 chr10 53989092 53989276 -91600012 - MER5A DNA MER1_type 0 189 4 297 345 51 59 chr10 53989276 53989532 -91599756 - L2 LINE L2 -406 2866 2613 1376 225 62 0 chr10 53990700 53991073 -91598215 + L1PB2 LINE L1 4872 5267 -879 7196 87 35 17 chr10 53991112 53992151 -91597137 - MER11C LTR ERVK -14 1057 1 5920 102 17 5 chr10 53992151 53993029 -91596259 + L1PB2 LINE L1 5262 6150 -1 4733 51 2 5 chr10 53994841 53995425 -91593863 - L1PA7 LINE L1 -265 5889 5304 1847 52 39 0 chr10 53995425 53995658 -91593630 + L1PA7 LINE L1 5895 6136 -18 4733 51 2 5 chr10 53995658 53995687 -91593601 - L1PA7 LINE L1 -850 5304 5276 1619 188 0 41 chr10 53996386 53996706 -91592582 + AluJb SINE Alu 1 307 -5 672 320 65 17 chr10 53996707 53997001 -91592287 + MER102b DNA MER1_type 1 308 -33 227 394 69 11 chr10 53997085 53997273 -91592015 + MIR SINE MIR 54 252 -10 209 230 77 0 chr10 53997640 53997692 -91591596 + MIR SINE MIR 99 153 -62 361 297 150 18 chr10 53997702 53997975 -91591313 - MLT1J1 LTR MaLR -1 445 137 191 284 172 52 chr10 53998965 53999099 -91590189 - L2 LINE L2 -211 3061 2912 21286 55 6 0 chr10 53999122 54004551 -91584737 - L1PA5 LINE L1 0 6154 618 2045 116 39 0 chr10 54004533 54004844 -91584444 + L1PA5 LINE L1 298 620 -5526 * 520 278 71 24 chr10 54005016 54005185 -91584103 + MER5B DNA MER1_type 1 177 -1 253 306 111 89 chr10 54005301 54005706 -91583582 - L2 LINE L2 -833 2481 2068 487 62 0 49 chr10 54006014 54006095 -91583193 - L1PA16 LINE L1 -11 6155 6079 475 297 7 0 chr10 54007456 54007594 -91581694 - MIR SINE MIR -77 185 47 198 0 0 0 chr10 54008023 54008045 -91581243 + (T)n Simple_repeat Simple_repeat 1 22 0 2522 14 3 0 chr10 54008054 54008346 -91580942 - L1PA2 LINE L1 -2 6153 5861 1965 148 0 0 chr10 54009114 54009427 -91579861 - AluSx SINE Alu 0 313 1 27 29 0 0 chr10 54009711 54009745 -91579543 + AT_rich Low_complexity Low_complexity 1 34 0 1150 93 23 0 chr10 54009787 54009959 -91579329 - L1MA5A LINE L1 -76 6221 6046 1712 192 3 3 chr10 54010021 54010333 -91578955 - AluJb SINE Alu 0 312 1 305 242 153 113 chr10 54010623 54010871 -91578417 - L2 LINE L2 -61 3252 2995 33 0 0 0 chr10 54011268 54011301 -91577987 + AT_rich Low_complexity Low_complexity 1 33 0 693 35 0 0 chr10 54011301 54011387 -91577901 - L1PA3 LINE L1 -3 6152 6067 24 0 0 0 chr10 54012095 54012119 -91577169 + AT_rich Low_complexity Low_complexity 1 24 0 205 275 62 0 chr10 54012736 54012816 -91576472 - MER5A DNA MER1_type -23 166 82 189 0 0 0 chr10 54012826 54012847 -91576441 + (GA)n Simple_repeat Simple_repeat 1 21 0 233 122 61 0 chr10 54012853 54012902 -91576386 + (TGGG)n Simple_repeat Simple_repeat 4 55 0 735 191 0 0 chr10 54013285 54013416 -91575872 + FRAM SINE Alu 36 166 -10 242 94 0 0 chr10 54013546 54013578 -91575710 + Alu SINE Alu 49 80 -222 361 331 0 16 chr10 54014043 54014170 -91575118 - L1MEc LINE L1 -4421 1975 1851 539 324 130 32 chr10 54014358 54014864 -91574424 - MLT1K LTR MaLR -6 582 27 265 258 16 0 chr10 54016101 54016163 -91573125 - L2 LINE L2 -46 3226 3164 10303 173 21 34 chr10 54016206 54017694 -91571594 - L1MA9 LINE L1 -5 6307 4800 342 58 10 233 chr10 54017694 54017797 -91571491 + MADE1 DNA Mariner 1 80 0 10303 173 21 34 chr10 54017797 54017948 -91571340 - L1MA9 LINE L1 -1512 4800 4648 1848 153 3 32 chr10 54017948 54018256 -91571032 + AluJo SINE Alu 1 299 -13 10303 173 21 34 chr10 54018256 54019961 -91569327 - L1MA9 LINE L1 -1664 4648 3013 533 320 58 0 chr10 54021207 54021413 -91567875 - MIR SINE MIR -15 247 30 216 184 0 0 chr10 54021993 54022031 -91567257 + L2 LINE L2 3256 3293 -20 2126 122 0 0 chr10 54022374 54022662 -91566626 - AluSx SINE Alu -24 288 1 183 283 0 38 chr10 54025544 54025597 -91563691 - L2 LINE L2 -1 3312 3262 466 209 22 178 chr10 54025880 54026110 -91563178 - MIR SINE MIR -5 257 64 24 0 0 0 chr10 54026819 54026843 -91562445 + AT_rich Low_complexity Low_complexity 1 24 0 218 205 0 0 chr10 54026953 54026992 -91562296 + (CATATA)n Simple_repeat Simple_repeat 2 40 0 2026 128 3 0 chr10 54026992 54027274 -91562014 - AluSx SINE Alu -27 285 3 22 0 0 0 chr10 54027620 54027642 -91561646 + AT_rich Low_complexity Low_complexity 1 22 0 3217 32 0 0 chr10 54027642 54028019 -91561269 - L1PA3 LINE L1 -3 6152 5776 235 253 49 38 chr10 54028019 54028157 -91561131 - MIR SINE MIR -66 142 10 319 376 73 11 chr10 54029180 54029358 -91559930 - MIR SINE MIR -72 190 2 28 0 0 0 chr10 54030290 54030318 -91558970 + AT_rich Low_complexity Low_complexity 1 28 0 546 270 199 14 chr10 54030403 54030614 -91558674 - MIR SINE MIR -11 251 2 409 349 41 10 chr10 54031463 54031658 -91557630 + MIR SINE MIR 61 261 -1 1022 238 303 17 chr10 54031802 54032387 -91556901 - LTR50 LTR ERVL -43 752 1 5237 153 8 12 chr10 54032432 54033398 -91555890 + L1PB4 LINE L1 5180 6142 -14 239 358 155 34 chr10 54033482 54033689 -91555599 - L2 LINE L2 -8 3264 3033 24 0 0 0 chr10 54033753 54033777 -91555511 + AT_rich Low_complexity Low_complexity 1 24 0 304 273 64 18 chr10 54033868 54033978 -91555310 - L2 LINE L2 -21 3292 3178 212 329 29 138 chr10 54034263 54034503 -91554785 + L2 LINE L2 3002 3215 -57 2149 117 3 3 chr10 54035019 54035328 -91553960 - AluSp SINE Alu -4 309 1 257 50 0 25 chr10 54036227 54036267 -91553021 + (TG)n Simple_repeat Simple_repeat 1 39 0 1009 211 82 45 chr10 54036806 54037137 -91552151 + MER2 DNA MER2_type 1 343 -1 208 354 0 0 chr10 54038767 54038832 -91550456 - MIR SINE MIR -133 129 65 2186 103 0 3 chr10 54039562 54039879 -91549409 + AluSg SINE Alu 5 310 0 293 377 33 0 chr10 54041244 54041366 -91547922 + L2 LINE L2 3187 3312 -1 390 278 0 0 chr10 54041474 54041564 -91547724 + MIR SINE MIR 134 223 -39 25 31 0 0 chr10 54044221 54044253 -91545035 + AT_rich Low_complexity Low_complexity 1 32 0 531 305 89 9 chr10 54044325 54044538 -91544750 + MIR SINE MIR 23 252 -10 2799 97 35 2 chr10 54044644 54045067 -91544221 + L1MA2 LINE L1 5868 6304 0 494 219 78 0 chr10 54045127 54045255 -91544033 - MER33 DNA MER1_type -186 138 1 403 261 12 109 chr10 54046077 54046242 -91543046 - MIR SINE MIR -10 252 104 424 319 34 26 chr10 54046532 54046743 -91542545 + MIR SINE MIR 11 261 -1 1402 174 85 25 chr10 54046843 54047124 -91542164 + AluJo SINE Alu 1 298 -14 5185 157 30 26 chr10 54047126 54047622 -91541666 - L1MA4 LINE L1 -11 6289 5796 2042 46 70 49 chr10 54047622 54047906 -91541382 + AluY SINE Alu 1 290 -21 5185 157 30 26 chr10 54047906 54048417 -91540871 - L1MA4 LINE L1 -504 5796 5278 729 117 0 0 chr10 54048417 54048520 -91540768 - AluSx SINE Alu -12 297 195 1027 104 0 0 chr10 54048520 54048655 -91540633 - AluSx SINE Alu -177 135 1 1021 212 18 0 chr10 54048675 54048901 -91540387 - L1MA4 LINE L1 -894 5252 5023 2026 143 0 7 chr10 54050289 54050589 -91538699 + AluSx SINE Alu 1 298 -14 22 35 0 0 chr10 54050630 54050659 -91538629 + AT_rich Low_complexity Low_complexity 1 29 0 5276 132 14 68 chr10 54050660 54050684 -91538604 - L1MA8 LINE L1 -10 6281 6257 1815 203 12 3 chr10 54050684 54051029 -91538259 - MER7A DNA MER2_type 0 346 1 5276 132 14 68 chr10 54051029 54052591 -91536697 - L1MA8 LINE L1 -34 6257 4784 2165 241 89 61 chr10 54052570 54052872 -91536416 - L1M1 LINE L1 -4402 3163 2871 * 227 54 27 0 chr10 54052872 54052909 -91536379 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 2165 241 89 61 chr10 54052909 54053262 -91536026 - L1M1 LINE L1 -4694 2871 2530 2255 99 0 0 chr10 54053262 54053607 -91535681 - AluSx SINE Alu 0 345 1 2165 241 89 61 chr10 54053607 54054071 -91535217 - L1M1 LINE L1 -5035 2530 2010 2073 259 14 75 chr10 54054178 54054938 -91534350 - L1M1 LINE L1 -6310 1179 466 549 232 149 0 chr10 54056057 54056225 -91533063 - MIR SINE MIR 0 262 70 200 385 96 0 chr10 54056335 54056470 -91532818 + MIR SINE MIR 20 167 -95 726 256 78 7 chr10 54056473 54056666 -91532622 - MIR SINE MIR -21 241 38 349 318 45 15 chr10 54057027 54057159 -91532129 + L2 LINE L2 2596 2731 -583 471 63 0 0 chr10 54057290 54057353 -91531935 + (TC)n Simple_repeat Simple_repeat 1 63 0 226 214 0 17 chr10 54057521 54057609 -91531679 + L2 LINE L2 3175 3302 -11 207 69 0 0 chr10 54057611 54057640 -91531648 + (TGAA)n Simple_repeat Simple_repeat 4 32 0 232 339 58 0 chr10 54058030 54058151 -91531137 + L3b LINE CR1 1262 1389 -194 1640 59 0 32 chr10 54058152 54058371 -91530917 - AluY SINE Alu -2 309 98 1163 131 0 11 chr10 54058696 54058872 -91530416 - AluSg/x SINE Alu -20 292 119 2007 140 0 0 chr10 54059227 54059539 -91529749 + AluSx SINE Alu 1 312 0 291 345 42 0 chr10 54059638 54059757 -91529531 - MER117 DNA MER1_type -27 170 47 5939 69 57 47 chr10 54059976 54061582 -91527706 + L1PA10 LINE L1 4551 6164 -4 31 44 0 0 chr10 54062626 54062671 -91526617 + AT_rich Low_complexity Low_complexity 1 45 0 649 271 106 16 chr10 54062733 54063169 -91526119 - L1ME4a LINE L1 -122 5999 5525 2172 128 55 0 chr10 54064867 54065212 -91524076 - THE1B LTR MaLR 0 364 1 34 110 0 0 chr10 54066663 54066809 -91522479 + AT_rich Low_complexity Low_complexity 1 146 0 2747 135 5 9 chr10 54067190 54067620 -91521668 - MSTA LTR MaLR 0 428 1 2487 56 0 3 chr10 54070936 54071242 -91518046 + AluY SINE Alu 1 305 -6 197 331 113 7 chr10 54072173 54072324 -91516964 - MIR SINE MIR -17 245 79 432 82 0 0 chr10 54072606 54072667 -91516621 + (TG)n Simple_repeat Simple_repeat 2 62 0 2163 122 0 0 chr10 54072669 54072955 -91516333 - AluSx SINE Alu -15 297 12 6869 139 10 33 chr10 54073577 54073925 -91515363 + L1MA2 LINE L1 3972 4326 -1978 6833 53 15 8 chr10 54073925 54075596 -91513692 - L1PA7 LINE L1 0 6154 4466 6869 139 10 33 chr10 54075596 54077632 -91511656 + L1MA2 LINE L1 4326 6301 -3 448 343 70 23 chr10 54078113 54078370 -91510918 + MIR SINE MIR 2 262 0 21 36 0 0 chr10 54078912 54078940 -91510348 + AT_rich Low_complexity Low_complexity 1 28 0 206 344 97 58 chr10 54080031 54080185 -91509103 + L2 LINE L2 3108 3267 -5 * 208 284 91 0 chr10 54080177 54080265 -91509023 + L2 LINE L2 3208 3303 -10 1303 212 213 37 chr10 54081164 54081697 -91507591 - MLT1F LTR MaLR -4 587 1 22 35 0 0 chr10 54082409 54082438 -91506850 + AT_rich Low_complexity Low_complexity 1 29 0 240 35 0 0 chr10 54082618 54082647 -91506641 + (TG)n Simple_repeat Simple_repeat 2 30 0 257 333 25 49 chr10 54083606 54083768 -91505520 + MIR SINE MIR 34 191 -71 25 0 0 0 chr10 54084245 54084270 -91505018 + AT_rich Low_complexity Low_complexity 1 25 0 217 342 72 9 chr10 54084404 54084515 -91504773 - MIR SINE MIR -7 255 138 821 162 0 0 chr10 54085299 54085435 -91503853 - FRAM SINE Alu -5 171 36 2174 67 0 3 chr10 54085799 54086083 -91503205 - L1PA7 LINE L1 0 6154 5872 288 335 35 40 chr10 54086159 54086332 -91502956 + MER5B DNA MER1_type 7 178 0 255 270 0 0 chr10 54088305 54088368 -91500920 + MIR SINE MIR 186 248 -14 436 246 185 8 chr10 54088787 54088917 -91500371 + MER5A DNA MER1_type 34 186 -3 201 244 0 0 chr10 54090850 54090891 -91498397 + L3 LINE CR1 1523 1563 -14 186 403 40 10 chr10 54091055 54091256 -91498032 + L2 LINE L2 2829 3035 -237 1457 142 3 6 chr10 54092359 54092651 -91496637 - MLT1A1 LTR MaLR 0 365 1 322 284 57 35 chr10 54092717 54092858 -91496430 - MIR3 SINE MIR -62 146 3 27 0 0 0 chr10 54093595 54093622 -91495666 + AT_rich Low_complexity Low_complexity 1 27 0 255 103 0 0 chr10 54093629 54093668 -91495620 + (GA)n Simple_repeat Simple_repeat 2 40 0 321 26 0 0 chr10 54093668 54093706 -91495582 + (TG)n Simple_repeat Simple_repeat 2 39 0 1054 169 35 23 chr10 54093778 54094039 -91495249 - MER33 DNA MER1_type -6 318 55 317 377 0 0 chr10 54094322 54094428 -91494860 + MIR SINE MIR 45 150 -112 726 157 15 22 chr10 54094428 54094562 -91494726 + FLAM_A SINE Alu 1 133 0 1649 266 48 43 chr10 54095390 54096221 -91493067 - L1M4 LINE L1 -1679 4467 3633 211 250 115 0 chr10 54096296 54096348 -91492940 + MIR SINE MIR 2 59 -203 782 258 21 11 chr10 54096371 54096561 -91492727 - MLT1E LTR MaLR -7 586 395 1171 130 16 11 chr10 54096622 54096806 -91492482 - L1PA10 LINE L1 -21 6147 5963 1124 63 19 25 chr10 54096806 54096964 -91492324 + L1PA11 LINE L1 5734 5890 -284 1621 108 9 0 chr10 54097032 54097254 -91492034 + AluSq SINE Alu 1 224 -89 186 43 0 0 chr10 54097264 54097287 -91492001 + (TA)n Simple_repeat Simple_repeat 2 24 0 2370 58 43 21 chr10 54097287 54097615 -91491673 - L1PA7 LINE L1 -19 6135 5801 1098 185 8 134 chr10 54097629 54097980 -91491308 + MLT1A1 LTR MaLR 56 362 -3 * 1477 242 66 36 chr10 54097980 54098365 -91490923 - MLT1E LTR MaLR -195 398 2 449 339 18 0 chr10 54098371 54098539 -91490749 + MIR SINE MIR 91 261 -1 1218 181 8 17 chr10 54098541 54098779 -91490509 - MER46A DNA MER2_type 0 236 1 377 301 92 14 chr10 54098790 54099020 -91490268 - L2 LINE L2 -39 3274 2971 232 319 66 28 chr10 54099562 54099775 -91489513 - L1ME LINE L1 -299 5822 5602 2028 121 10 10 chr10 54099834 54100147 -91489141 - AluSq SINE Alu 0 313 1 468 269 56 31 chr10 54100358 54100518 -91488770 + MIR SINE MIR 10 173 -89 537 298 70 31 chr10 54100720 54100948 -91488340 + Charlie8 DNA MER1_type 11 247 -2170 433 297 115 22 chr10 54101803 54102035 -91487253 + MIR SINE MIR 1 249 -13 369 313 48 7 chr10 54102182 54102329 -91486959 + MIR SINE MIR 23 175 -87 272 276 82 0 chr10 54102511 54102609 -91486679 - MIR SINE MIR -56 206 101 258 299 27 34 chr10 54103237 54103384 -91485904 + L2 LINE L2 3041 3186 -127 265 320 13 0 chr10 54103387 54103465 -91485823 - MER63 DNA MER1_type 0 1062 984 453 97 0 0 chr10 54103465 54103527 -91485761 - MER63 DNA MER1_type -104 732 671 298 258 73 57 chr10 54103552 54103676 -91485612 + L2 LINE L2 3179 3304 -9 597 118 0 0 chr10 54103689 54103774 -91485514 + AluSx SINE Alu 1 85 -227 1701 109 0 0 chr10 54104227 54104457 -91484831 + AluSx SINE Alu 80 309 -1 260 172 0 16 chr10 54104470 54104534 -91484754 + (TGAA)n Simple_repeat Simple_repeat 2 64 0 266 254 14 0 chr10 54105770 54105841 -91483447 - MLT1L LTR MaLR 0 615 544 371 262 24 83 chr10 54106170 54106338 -91482950 - MLT1L LTR MaLR -415 200 43 239 250 100 0 chr10 54106381 54106461 -91482827 - MIR SINE MIR -110 152 65 751 235 28 72 chr10 54106529 54106780 -91482508 - MIR SINE MIR -10 252 13 192 288 270 0 chr10 54107554 54107665 -91481623 + MIR3 SINE MIR 3 143 -65 2103 205 9 43 chr10 54109464 54109928 -91479360 - MLT2B1 LTR ERVL -72 448 1 317 318 19 32 chr10 54110179 54110333 -91478955 - MIR SINE MIR -59 203 52 418 229 34 34 chr10 54110339 54110457 -91478831 + MER45A DNA AcHobo 1 118 -60 230 193 18 0 chr10 54110457 54110514 -91478774 + (TA)n Simple_repeat Simple_repeat 2 59 0 449 122 0 40 chr10 54110528 54110602 -91478686 + MER45A DNA AcHobo 105 175 -3 25 31 0 0 chr10 54111023 54111055 -91478233 + AT_rich Low_complexity Low_complexity 1 32 0 247 348 161 13 chr10 54111390 54111545 -91477743 - MIR3 SINE MIR -10 198 21 271 299 7 71 chr10 54112687 54112841 -91476447 + MIR SINE MIR 33 176 -86 809 171 116 28 chr10 54113933 54114114 -91475174 + MER20 DNA MER1_type 23 219 0 287 301 66 48 chr10 54114134 54114300 -91474988 - MIR SINE MIR -73 189 21 6684 66 53 68 chr10 54115287 54116670 -91472618 - SVA Other Other -553 1380 433 442 284 82 62 chr10 54117288 54117788 -91471500 - MLT1G LTR MaLR -2 553 1 412 262 178 22 chr10 54117894 54118079 -91471209 - MIR SINE MIR -54 208 2 1270 227 51 17 chr10 54119301 54119424 -91469864 + AluJo SINE Alu 1 118 -194 180 0 0 0 chr10 54119424 54119444 -91469844 + (GAAAA)n Simple_repeat Simple_repeat 2 21 0 1270 227 51 17 chr10 54119444 54119615 -91469673 + AluJo SINE Alu 118 305 -7 945 216 148 50 chr10 54120027 54120406 -91468882 + MER96B DNA MER1_type? 2 417 0 182 375 42 0 chr10 54120449 54120545 -91468743 - L3 LINE CR1 -2 1575 1476 2172 133 0 29 chr10 54121336 54121683 -91467605 - MER1B DNA MER1_type 0 337 1 1631 224 36 74 chr10 54121804 54122303 -91466985 + MLT2B1 LTR ERVL 1 480 -40 273 214 51 8 chr10 54122304 54122421 -91466867 + (TA)n Simple_repeat Simple_repeat 1 122 0 249 125 50 0 chr10 54122512 54122552 -91466736 + MLT2D LTR ERVL 373 414 0 274 289 69 125 chr10 54122862 54123295 -91465993 + LTR67 LTR ERVL 149 557 0 815 322 100 11 chr10 54123295 54123424 -91465864 - L2 LINE L2 -1 3312 3196 192 77 0 0 chr10 54123424 54123450 -91465838 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 815 322 100 11 chr10 54123450 54123680 -91465608 - L2 LINE L2 -117 3196 2921 956 183 93 55 chr10 54124230 54124541 -91464747 - MER33 DNA MER1_type 0 324 2 451 223 206 40 chr10 54126660 54126835 -91462453 - MIR SINE MIR -12 250 47 369 137 0 0 chr10 54128395 54128446 -91460842 - Tigger5 DNA MER2_type 0 2323 2273 3158 88 16 9 chr10 54129987 54130428 -91458860 - MLT2A1 LTR ERVL 0 444 1 19559 76 17 7 chr10 54130428 54132768 -91456520 - HERVL-A1 LTR ERVL 0 5654 3285 1966 125 17 7 chr10 54132768 54133064 -91456224 + AluSc SINE Alu 1 299 -10 19559 76 17 7 chr10 54133064 54133290 -91455998 - HERVL-A1 LTR ERVL -2369 3285 3063 2635 75 33 112 chr10 54133318 54133420 -91455868 - MLT2A1 LTR ERVL -1 443 335 438 108 0 0 chr10 54133420 54133485 -91455803 + (TG)n Simple_repeat Simple_repeat 2 66 0 2635 75 33 112 chr10 54133485 54133863 -91455425 - MLT2A1 LTR ERVL -109 335 1 225 268 24 8 chr10 54133958 54134085 -91455203 + (TA)n Simple_repeat Simple_repeat 2 130 0 1992 113 3 24 chr10 54134195 54134486 -91454802 - AluSx SINE Alu -19 293 9 444 67 0 0 chr10 54135364 54135424 -91453864 + (GA)n Simple_repeat Simple_repeat 1 60 0 2054 129 0 3 chr10 54135560 54135847 -91453441 + AluSg SINE Alu 5 290 -20 2007 112 30 7 chr10 54136549 54136852 -91452436 - AluSg SINE Alu 0 310 1 186 43 0 0 chr10 54137054 54137077 -91452211 + (TTG)n Simple_repeat Simple_repeat 2 24 0 473 337 71 5 chr10 54137151 54137347 -91451941 + MIR SINE MIR 19 227 -35 767 273 128 4 chr10 54138137 54138364 -91450924 - MIR SINE MIR 0 262 8 317 273 48 79 chr10 54138383 54138548 -91450740 - MIR SINE MIR -12 250 91 393 58 0 0 chr10 54139103 54139155 -91450133 + (TG)n Simple_repeat Simple_repeat 2 53 0 422 232 179 12 chr10 54139689 54139857 -91449431 + MIR SINE MIR 48 243 -19 254 306 12 12 chr10 54140565 54140650 -91448638 - MIR3 SINE MIR -54 154 70 24 0 0 0 chr10 54142393 54142417 -91446871 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr10 54142990 54143011 -91446277 + AT_rich Low_complexity Low_complexity 1 21 0 577 197 17 0 chr10 54143320 54143437 -91445851 - MSTA LTR MaLR -132 296 178 246 322 61 26 chr10 54143496 54143611 -91445677 - MER5A DNA MER1_type -30 159 41 343 296 9 9 chr10 54143640 54143748 -91445540 + MER5B DNA MER1_type 9 116 -62 2237 145 75 8 chr10 54143877 54144276 -91445012 - MSTB LTR MaLR 0 426 1 234 0 0 0 chr10 54144353 54144379 -91444909 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1582 194 0 24 chr10 54144381 54144670 -91444618 - AluJo SINE Alu -30 282 1 440 204 91 76 chr10 54145029 54145161 -91444127 + MIR3 SINE MIR 34 167 -41 203 158 0 123 chr10 54145192 54145249 -91444039 - L2 LINE L2 0 3313 3264 21 0 0 0 chr10 54146996 54147017 -91442271 + AT_rich Low_complexity Low_complexity 1 21 0 248 274 96 52 chr10 54147292 54147427 -91441861 - MIR3 SINE MIR -26 182 42 206 152 0 22 chr10 54148187 54148233 -91441055 + CT-rich Low_complexity Low_complexity 2 46 0 2105 104 0 17 chr10 54149185 54149508 -91439780 + AluSx SINE Alu 1 318 0 181 303 0 66 chr10 54149522 54149598 -91439690 - L2 LINE L2 -14 3258 3188 201 260 0 0 chr10 54150379 54150456 -91438832 + GA-rich Low_complexity Low_complexity 2 78 0 231 219 250 0 chr10 54150874 54150938 -91438350 + MER5A DNA MER1_type 12 91 -98 421 286 50 35 chr10 54151623 54151822 -91437466 + L1M4b LINE L1 11 212 -6647 1864 243 65 102 chr10 54152012 54153281 -91436007 + L1M4b LINE L1 802 2022 -4833 2315 223 69 29 chr10 54153291 54153325 -91435963 + L1ME1 LINE L1 5453 5484 -682 1890 159 3 19 chr10 54153325 54153639 -91435649 + AluJo SINE Alu 1 309 -3 2315 223 69 29 chr10 54153639 54154286 -91435002 + L1ME1 LINE L1 5484 6161 -5 1946 249 101 12 chr10 54154388 54154950 -91434338 - MER74B LTR ERVL -10 612 1 186 43 0 0 chr10 54155059 54155082 -91434206 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 22 0 0 0 chr10 54155485 54155507 -91433781 + AT_rich Low_complexity Low_complexity 1 22 0 306 294 48 32 chr10 54157136 54157262 -91432026 - MIR SINE MIR -61 147 20 204 40 0 0 chr10 54158431 54158456 -91430832 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 238 48 0 48 chr10 54158616 54158658 -91430630 + (TA)n Simple_repeat Simple_repeat 2 41 0 209 293 122 0 chr10 54158839 54158921 -91430367 - L2 LINE L2 -1 3271 3180 272 274 97 86 chr10 54159236 54159422 -91429866 + MIR SINE MIR 66 253 -9 266 310 51 56 chr10 54159999 54160196 -91429092 - MIR SINE MIR -62 200 5 892 239 18 31 chr10 54160932 54161154 -91428134 + MER20 DNA MER1_type 1 219 0 395 351 152 6 chr10 54161168 54161333 -91427955 + MER5A DNA MER1_type 1 189 0 2451 182 36 17 chr10 54161366 54161894 -91427394 - L1MC3 LINE L1 -21 7764 7227 21 0 0 0 chr10 54162190 54162211 -91427077 + AT_rich Low_complexity Low_complexity 1 21 0 203 360 88 8 chr10 54163236 54163361 -91425927 - MIR3 SINE MIR -70 138 4 485 190 0 0 chr10 54163452 54163531 -91425757 + Tigger5 DNA MER2_type 1 79 -2244 314 330 55 55 chr10 54164777 54164977 -91424311 + MIR3 SINE MIR 3 202 -6 253 269 161 15 chr10 54166014 54166144 -91423144 - MLT1G1 LTR MaLR -41 501 353 295 273 110 34 chr10 54166154 54166315 -91422973 - MLT1G1 LTR MaLR -360 189 11 1289 202 0 5 chr10 54166364 54166587 -91422701 + MER58A DNA MER1_type 3 224 0 305 304 7 58 chr10 54166879 54167017 -91422271 - MER5B DNA MER1_type -1 177 47 766 201 82 10 chr10 54168193 54168387 -91420901 + MER3 DNA MER1_type 1 208 -1 185 306 162 18 chr10 54169115 54169226 -91420062 - L2 LINE L2 -3 3269 3143 858 278 36 0 chr10 54170164 54170412 -91418876 - MER46C DNA MER2_type 0 338 82 1230 181 32 0 chr10 54171222 54171252 -91418036 + AluJb SINE Alu 87 115 -197 180 77 0 0 chr10 54171252 54171278 -91418010 + (CA)n Simple_repeat Simple_repeat 1 26 0 1230 181 32 0 chr10 54171278 54171463 -91417825 + AluJb SINE Alu 115 309 -3 194 0 39 0 chr10 54172423 54172449 -91416839 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1423 234 82 13 chr10 54174163 54174637 -91414651 - Charlie4a DNA MER1_type -1 507 1 1075 221 38 19 chr10 54175225 54175488 -91413800 - L1MB8 LINE L1 -1 6177 5910 * 6111 223 6 14 chr10 54175487 54176943 -91412345 - L1PB2 LINE L1 -2001 4145 2703 3083 226 7 4 chr10 54176942 54177691 -91411597 + L1PB2 LINE L1 4147 4897 -1249 * 2298 122 11 24 chr10 54177693 54178062 -91411226 - THE1B LTR MaLR 0 364 1 982 137 0 0 chr10 54178066 54178219 -91411069 - THE1B-int LTR MaLR -4 1576 1424 6097 92 14 57 chr10 54178222 54179162 -91410126 - THE1B-int LTR MaLR -681 899 1 2361 124 8 27 chr10 54179162 54179533 -91409755 - THE1B LTR MaLR 0 364 1 5770 141 22 5 chr10 54179538 54180769 -91408519 + L1PB2 LINE L1 4900 6148 -3 726 158 134 1 chr10 54180771 54180936 -91408352 - L1MB5 LINE L1 -233 5935 5751 237 204 19 19 chr10 54181035 54181089 -91408199 - L3b LINE CR1 -255 1328 1275 207 295 33 0 chr10 54181742 54181803 -91407485 - MIR SINE MIR -89 173 111 551 211 6 3 chr10 54181959 54182150 -91407138 - MER8 DNA MER2_type 0 239 2 506 276 43 25 chr10 54182755 54182918 -91406370 - MIR SINE MIR -58 204 39 975 185 92 5 chr10 54183207 54183402 -91405886 - MER20 DNA MER1_type 0 219 8 22 35 0 0 chr10 54186093 54186122 -91403166 + AT_rich Low_complexity Low_complexity 1 29 0 1771 110 17 67 chr10 54187179 54187479 -91401809 + AluSc SINE Alu 5 289 -20 2698 17 0 0 chr10 54187795 54188096 -91401192 + AluY SINE Alu 1 301 -10 816 289 46 42 chr10 54189049 54189309 -91399979 - MIR SINE MIR -1 261 1 27 29 0 0 chr10 54189747 54189781 -91399507 + AT_rich Low_complexity Low_complexity 1 34 0 22 0 0 0 chr10 54192497 54192519 -91396769 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr10 54194275 54194306 -91394982 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr10 54194502 54194531 -91394757 + AT_rich Low_complexity Low_complexity 1 29 0 277 373 10 0 chr10 54197314 54197416 -91391872 - MIR SINE MIR -97 165 63 719 188 82 6 chr10 54198446 54198616 -91390672 + MER5A DNA MER1_type 2 184 -5 189 0 0 0 chr10 54199786 54199807 -91389481 + (TTG)n Simple_repeat Simple_repeat 1 21 0 308 339 31 8 chr10 54200098 54200228 -91389060 - MIR SINE MIR -53 209 77 558 308 80 5 chr10 54200614 54200838 -91388450 + MIR SINE MIR 8 248 -14 226 194 252 0 chr10 54202425 54202528 -91386760 - L1ME4a LINE L1 -4 6117 5989 264 88 0 0 chr10 54204358 54204392 -91384896 + (TCCC)n Simple_repeat Simple_repeat 3 36 0 324 164 0 0 chr10 54204392 54204459 -91384829 + CT-rich Low_complexity Low_complexity 3 69 0 1760 156 0 7 chr10 54204459 54204734 -91384554 - AluSx SINE Alu -39 273 1 395 267 107 20 chr10 54205938 54206088 -91383200 + MIR SINE MIR 87 249 -13 2227 106 3 28 chr10 54206186 54206506 -91382782 - AluSq SINE Alu -1 312 1 893 163 0 0 chr10 54207621 54207762 -91381526 - AluJb SINE Alu -171 141 1 180 128 26 26 chr10 54207804 54207843 -91381445 - L2 LINE L2 -9 3304 3266 23 0 0 0 chr10 54208363 54208386 -91380902 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr10 54209268 54209298 -91379990 + AT_rich Low_complexity Low_complexity 1 30 0 943 208 5 5 chr10 54209319 54209521 -91379767 - L1MB1 LINE L1 -80 6109 5908 600 253 6 12 chr10 54209520 54209686 -91379602 + L1MA10 LINE L1 6167 6331 -3 * 523 233 0 17 chr10 54210698 54210818 -91378470 + MLT1E LTR MaLR 21 138 -455 221 331 211 7 chr10 54212251 54212393 -91376895 - L2 LINE L2 -3 3269 3099 221 341 0 11 chr10 54212437 54212525 -91376763 - L2 LINE L2 -272 3000 2914 726 194 146 0 chr10 54212597 54212762 -91376526 + MER5A DNA MER1_type 1 189 0 314 283 185 11 chr10 54213648 54213832 -91375456 - MIR SINE MIR -9 253 38 441 302 11 64 chr10 54213877 54214096 -91375192 + L1ME3A LINE L1 5473 5681 -440 251 359 88 13 chr10 54214633 54214792 -91374496 - MIR3 SINE MIR -6 202 32 705 236 19 0 chr10 54217245 54217406 -91371882 - FRAM SINE Alu -2 164 1 2142 102 3 3 chr10 54218286 54218579 -91370709 - AluSx SINE Alu -19 293 1 351 327 0 18 chr10 54220260 54220370 -91368918 + MIR SINE MIR 44 151 -57 445 317 43 6 chr10 54220509 54220670 -91368618 - L2 LINE L2 0 3313 3147 218 234 43 0 chr10 54221283 54221330 -91367958 - L2 LINE L2 -9 3304 3256 490 146 117 11 chr10 54221673 54221790 -91367498 + L1MA8 LINE L1 6162 6281 -10 1602 161 9 68 chr10 54222839 54223161 -91366127 + AluJo SINE Alu 1 303 -9 347 75 19 0 chr10 54224095 54224148 -91365140 + MADE1 DNA Mariner 1 54 -26 203 317 0 0 chr10 54225002 54225062 -91364226 + CT-rich Low_complexity Low_complexity 1 60 0 * 333 307 6 25 chr10 54225005 54225168 -91364120 + T-rich Low_complexity Low_complexity 3 162 0 394 348 130 20 chr10 54225890 54226347 -91362941 + L2 LINE L2 1366 1886 -1428 997 251 45 70 chr10 54226347 54226746 -91362542 + MLT1B LTR MaLR 2 390 0 394 348 130 20 chr10 54226746 54226797 -91362491 + L2 LINE L2 1886 1930 -1384 358 260 70 1 chr10 54226904 54227024 -91362264 + L1ME3A LINE L1 5748 5873 -297 664 181 99 39 chr10 54227078 54227260 -91362028 - L2 LINE L2 -3 3310 3118 214 274 160 9 chr10 54227459 54227565 -91361723 + L2 LINE L2 2217 2338 -976 5750 99 9 39 chr10 54228548 54230369 -91358919 - L1PA14 LINE L1 -3 6158 4376 704 327 36 20 chr10 54230849 54231097 -91358191 - MIR SINE MIR -10 252 1 868 285 56 90 chr10 54231185 54231578 -91357710 - L2 LINE L2 -349 2965 2591 1927 113 0 7 chr10 54231578 54231852 -91357436 + AluY SINE Alu 40 311 0 868 285 56 90 chr10 54231852 54231957 -91357331 - L2 LINE L2 -723 2591 2484 1407 198 10 40 chr10 54232105 54232403 -91356885 + AluJo SINE Alu 1 289 -23 545 273 18 6 chr10 54232881 54233046 -91356242 + L1MC4a LINE L1 5769 5935 -1873 669 233 72 0 chr10 54233311 54233491 -91355797 - L1MC/D LINE L1 -2042 5766 5574 529 234 278 15 chr10 54233533 54233738 -91355550 + MIR SINE MIR 4 262 0 255 272 43 43 chr10 54234019 54234111 -91355177 - MER5B DNA MER1_type 0 178 87 479 294 27 7 chr10 54234175 54234321 -91354967 + L2 LINE L2 3116 3264 -8 1014 146 18 0 chr10 54236117 54236282 -91353006 - FRAM SINE Alu -9 167 1 204 355 33 50 chr10 54237499 54237620 -91351668 + MIR3 SINE MIR 85 203 -5 3091 176 110 36 chr10 54238842 54238904 -91350384 + L1MDa LINE L1 1009 1065 -5475 1936 164 0 16 chr10 54238904 54239221 -91350067 + AluJb SINE Alu 1 312 0 3091 176 110 36 chr10 54239221 54239966 -91349322 + L1MDa LINE L1 1065 1876 -4664 2138 156 69 10 chr10 54240367 54240771 -91348517 - MSTA LTR MaLR 0 428 1 2437 62 0 10 chr10 54241763 54242069 -91347219 - AluSg SINE Alu -7 303 1 341 167 0 0 chr10 54242070 54242124 -91347164 - Alu SINE Alu -248 54 1 2073 122 3 0 chr10 54242137 54242433 -91346855 - AluSx SINE Alu -15 297 1 209 252 168 8 chr10 54242500 54242619 -91346669 - MIR3 SINE MIR -58 150 13 297 130 241 0 chr10 54242777 54242831 -91346457 + MER4E LTR ERV1 640 706 -73 886 102 8 0 chr10 54243031 54243159 -91346129 + AluJb SINE Alu 1 129 -183 295 336 80 0 chr10 54243509 54243634 -91345654 - MIR SINE MIR -98 164 30 270 0 0 0 chr10 54243698 54243728 -91345560 + (TTA)n Simple_repeat Simple_repeat 3 32 0 1264 166 73 89 chr10 54243892 54244194 -91345094 - AluJb SINE Alu -15 297 1 894 279 40 66 chr10 54244649 54245076 -91344212 + MLT1L LTR MaLR 200 615 0 386 272 150 17 chr10 54245266 54245446 -91343842 - MIR SINE MIR -30 232 29 1335 129 132 66 chr10 54245965 54246283 -91343005 - MER44D DNA MER2_type 0 609 1 24 0 0 0 chr10 54246732 54246756 -91342532 + AT_rich Low_complexity Low_complexity 1 24 0 377 315 55 35 chr10 54247476 54247676 -91341612 - MIR SINE MIR -42 220 17 2627 146 32 2 chr10 54248280 54248718 -91340570 - L1PA16 LINE L1 -9 6157 5707 31 82 0 0 chr10 54248759 54248832 -91340456 + AT_rich Low_complexity Low_complexity 1 73 0 379 313 8 8 chr10 54249073 54249201 -91340087 + CT-rich Low_complexity Low_complexity 4 131 0 277 284 29 20 chr10 54249270 54249372 -91339916 - MIR3 SINE MIR -6 202 100 22 0 0 0 chr10 54250286 54250308 -91338980 + AT_rich Low_complexity Low_complexity 1 22 0 249 359 84 59 chr10 54250364 54250684 -91338604 - L2 LINE L2 0 3272 2945 654 134 38 0 chr10 54250712 54250722 -91338566 + (TA)n Simple_repeat Simple_repeat 1 9 -154 198 0 0 0 chr10 54250722 54250744 -91338544 + (CA)n Simple_repeat Simple_repeat 2 23 0 654 134 38 0 chr10 54250744 54250890 -91338398 + (TA)n Simple_repeat Simple_repeat 9 163 0 355 191 36 30 chr10 54250906 54251074 -91338214 + (TA)n Simple_repeat Simple_repeat 2 170 0 474 249 34 28 chr10 54251097 54251274 -91338014 + (CATA)n Simple_repeat Simple_repeat 2 179 0 412 171 59 6 chr10 54251290 54251460 -91337828 + (TA)n Simple_repeat Simple_repeat 2 180 0 507 308 13 13 chr10 54251526 54251682 -91337606 - L2 LINE L2 -571 2743 2588 1858 92 0 8 chr10 54255807 54256056 -91333232 + AluSg SINE Alu 64 310 0 308 247 0 25 chr10 54257728 54257809 -91331479 + MER116 DNA Mariner 1 79 -1 29 28 0 0 chr10 54257819 54257855 -91331433 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr10 54260160 54260181 -91329107 + AT_rich Low_complexity Low_complexity 1 21 0 1406 35 0 10 chr10 54260181 54260413 -91328875 - L1PA5 LINE L1 -711 5443 5214 5667 45 0 6 chr10 54260413 54261111 -91328177 + L1PA5 LINE L1 5448 6149 -5 474 297 180 32 chr10 54261691 54262092 -91327196 - L3 LINE CR1 -548 1029 570 293 336 62 0 chr10 54262248 54262361 -91326927 - MIR3 SINE MIR -7 201 82 408 337 102 5 chr10 54262703 54262890 -91326398 + MIR SINE MIR 58 262 0 2172 137 0 20 chr10 54263768 54264112 -91325176 + MER1B DNA MER1_type 1 337 0 2187 111 3 0 chr10 54264151 54264458 -91324830 + AluSg SINE Alu 1 308 -2 293 56 79 48 chr10 54266702 54266828 -91322460 + (TA)n Simple_repeat Simple_repeat 1 130 0 325 338 55 14 chr10 54267039 54267184 -91322104 + MIR SINE MIR 2 152 -110 266 360 14 20 chr10 54267272 54267419 -91321869 + MER5B DNA MER1_type 1 146 -32 2183 104 10 0 chr10 54267419 54267717 -91321571 - AluSg SINE Alu -9 301 1 317 316 0 34 chr10 54267862 54267979 -91321309 - L2 LINE L2 -2 3311 3199 28 0 0 0 chr10 54267988 54268016 -91321272 + AT_rich Low_complexity Low_complexity 1 28 0 1691 172 38 40 chr10 54268092 54268221 -91321067 + L1P4 LINE L1 4937 5065 -1101 2492 43 0 0 chr10 54268221 54268518 -91320770 + L1PA3 LINE L1 5855 6155 0 1691 172 38 40 chr10 54268518 54268900 -91320388 + L1P4 LINE L1 5065 5431 -735 237 231 19 0 chr10 54268938 54268990 -91320298 + MIR SINE MIR 60 112 -96 1988 135 7 0 chr10 54269145 54269442 -91319846 + AluSx SINE Alu 1 299 -13 23 33 0 0 chr10 54269464 54269494 -91319794 + AT_rich Low_complexity Low_complexity 1 30 0 2466 65 3 0 chr10 54270473 54270781 -91318507 - AluY SINE Alu -2 309 1 367 319 9 9 chr10 54271159 54271275 -91318013 + MIR3 SINE MIR 47 162 -46 23 33 0 0 chr10 54271465 54271495 -91317793 + AT_rich Low_complexity Low_complexity 1 30 0 451 258 0 0 chr10 54271550 54271639 -91317649 + MER63 DNA MER1_type 677 765 -297 250 320 107 10 chr10 54271728 54271831 -91317457 + MIR SINE MIR 34 146 -62 187 203 34 0 chr10 54272277 54272336 -91316952 + GA-rich Low_complexity Low_complexity 2 62 0 2186 107 7 3 chr10 54273225 54273533 -91315755 + AluSg SINE Alu 1 309 -1 724 304 136 20 chr10 54275410 54276045 -91313243 - L2 LINE L2 -142 3171 2461 574 226 84 11 chr10 54276772 54276962 -91312326 + MER113 DNA MER1_type? 18 221 -300 23 54 0 0 chr10 54277874 54277911 -91311377 + AT_rich Low_complexity Low_complexity 1 37 0 989 207 77 5 chr10 54278018 54278240 -91311048 + MER58B DNA MER1_type 104 341 0 326 260 55 55 chr10 54278295 54278441 -91310847 + L1MEd LINE L1 16 161 -5958 752 202 98 49 chr10 54278722 54278739 -91310549 - MER33 DNA MER1_type -2283 302 287 452 188 0 0 chr10 54278739 54278819 -91310469 + MADE1 DNA Mariner 1 80 0 752 202 98 49 chr10 54278819 54279050 -91310238 - MER33 DNA MER1_type -2298 287 36 2021 132 24 3 chr10 54279050 54279338 -91309950 + AluSx SINE Alu 3 296 -16 752 202 98 49 chr10 54279338 54279375 -91309913 - MER33 DNA MER1_type -2549 36 2 2476 87 0 0 chr10 54279440 54279751 -91309537 - AluY SINE Alu 0 311 1 198 0 0 0 chr10 54279874 54279896 -91309392 + (TTCC)n Simple_repeat Simple_repeat 3 24 0 381 160 16 16 chr10 54279897 54280022 -91309266 + CT-rich Low_complexity Low_complexity 1 125 0 1176 240 93 3 chr10 54280521 54280834 -91308454 + MER58B DNA MER1_type 1 341 0 1893 203 54 5 chr10 54280884 54281292 -91307996 - MSTA LTR MaLR 0 428 1 190 349 54 62 chr10 54281469 54281598 -91307690 + MIR3 SINE MIR 58 185 -23 239 294 0 78 chr10 54283798 54283864 -91305424 - L2 LINE L2 -1 3312 3255 2034 106 14 10 chr10 54283864 54284157 -91305131 - AluSx SINE Alu -16 296 3 239 294 0 78 chr10 54284157 54284192 -91305096 - L2 LINE L2 -58 3255 3219 289 283 125 71 chr10 54284233 54284530 -91304758 - L3b LINE CR1 -84 1499 1187 327 279 74 25 chr10 54284589 54284711 -91304577 - L2 LINE L2 0 3313 3186 30 27 0 0 chr10 54284800 54284837 -91304451 + AT_rich Low_complexity Low_complexity 1 37 0 251 175 31 10 chr10 54284872 54284969 -91304319 + (TA)n Simple_repeat Simple_repeat 1 99 0 383 301 84 7 chr10 54285113 54285256 -91304032 + MIR SINE MIR 92 245 -17 376 343 70 19 chr10 54285737 54285950 -91303338 + MIR SINE MIR 21 244 -18 207 314 45 90 chr10 54286509 54286665 -91302623 + L2 LINE L2 2573 2721 -593 2157 117 3 0 chr10 54286871 54287162 -91302126 + AluSx SINE Alu 2 293 -19 374 267 112 21 chr10 54287606 54287793 -91301495 + L2 LINE L2 2380 2583 -731 788 310 106 9 chr10 54287799 54288128 -91301160 + MER34 LTR ERV1 159 519 -23 513 294 6 38 chr10 54288261 54288421 -91300867 + L2 LINE L2 3155 3309 -4 1427 191 82 120 chr10 54288577 54289446 -91299842 + LTR28 LTR ERV1 1 819 -7 21 95 0 0 chr10 54289993 54290056 -91299232 + AT_rich Low_complexity Low_complexity 1 63 0 1225 185 10 0 chr10 54290088 54290288 -91299000 + MER20 DNA MER1_type 16 217 -2 346 239 60 0 chr10 54290765 54290882 -91298406 - L1ME3A LINE L1 -6 6164 6041 9728 25 0 0 chr10 54290885 54292068 -91297220 - L1P LINE L1 -2724 3422 2240 7869 17 0 0 chr10 54292070 54292972 -91296316 + L1PA2 LINE L1 5254 6155 0 24 0 0 0 chr10 54292973 54292997 -91296291 + AT_rich Low_complexity Low_complexity 1 24 0 1146 308 94 14 chr10 54293004 54293856 -91295432 - L1ME1 LINE L1 -135 6031 5103 2167 94 3 36 chr10 54294114 54294422 -91294866 + AluSg SINE Alu 1 298 -12 397 174 196 11 chr10 54294685 54294777 -91294511 + Tigger1 DNA MER2_type 2296 2404 -14 675 205 22 11 chr10 54294779 54294964 -91294324 + L1MA8 LINE L1 6099 6285 -6 181 238 79 32 chr10 54295369 54295432 -91293856 + MIR SINE MIR 107 172 -90 661 174 8 30 chr10 54295505 54295637 -91293651 + FLAM_C SINE Alu 14 142 -1 662 259 174 5 chr10 54296944 54297156 -91292132 - MIR SINE MIR -3 259 12 7124 48 7 0 chr10 54297853 54299143 -91290145 - L1PA4 LINE L1 -1 6154 4860 14636 34 1 1 chr10 54299143 54300914 -91288374 + L1PA4 LINE L1 3100 4871 -1275 422 370 5 26 chr10 54302454 54302646 -91286642 - MIR SINE MIR -59 203 16 186 43 0 0 chr10 54303357 54303380 -91285908 + (A)n Simple_repeat Simple_repeat 1 23 0 936 185 76 19 chr10 54303708 54303919 -91285369 - AluJb SINE Alu -2 310 88 764 138 0 0 chr10 54304994 54305110 -91284178 - FLAM_C SINE Alu -17 116 1 298 85 34 0 chr10 54305439 54305498 -91283790 + (TA)n Simple_repeat Simple_repeat 2 62 0 540 153 126 0 chr10 54306681 54306792 -91282496 + L1ME LINE L1 5542 5666 -500 1496 106 27 34 chr10 54306827 54307119 -91282169 + AluY SINE Alu 1 290 -21 790 22 0 0 chr10 54307635 54307726 -91281562 + MER11D LTR ERVK 1 91 -806 6069 47 45 3 chr10 54307744 54308519 -91280769 + MER11D LTR ERVK 1 808 -89 268 335 40 6 chr10 54309857 54310030 -91279258 + L1ME LINE L1 5522 5700 -421 599 266 184 5 chr10 54310326 54310544 -91278744 + MIR SINE MIR 5 261 -1 1159 136 11 57 chr10 54311747 54312011 -91277277 + MER11D LTR ERVK 646 897 0 22 80 0 0 chr10 54312170 54312220 -91277068 + AT_rich Low_complexity Low_complexity 1 50 0 21 82 0 0 chr10 54312368 54312417 -91276871 + AT_rich Low_complexity Low_complexity 1 49 0 257 334 26 32 chr10 54312417 54312758 -91276530 + L1ME LINE L1 5408 5904 -266 2226 110 27 0 chr10 54313622 54313923 -91275365 + AluSx SINE Alu 1 309 -3 320 271 187 13 chr10 54315251 54315406 -91273882 - MIR SINE MIR -13 249 68 667 200 131 0 chr10 54316310 54316455 -91272833 - MER69A DNA AcHobo -13 164 1 521 138 73 206 chr10 54317236 54317454 -91271834 - MER5A DNA MER1_type 0 189 1 306 252 16 16 chr10 54317456 54317561 -91271727 + MIR3 SINE MIR 104 208 0 219 180 20 20 chr10 54318009 54318059 -91271229 + CT-rich Low_complexity Low_complexity 1 50 0 264 213 0 80 chr10 54318584 54318659 -91270629 - MIR SINE MIR -70 192 124 498 311 143 5 chr10 54318788 54318997 -91270291 - MIR SINE MIR 0 262 25 21 0 0 0 chr10 54319022 54319043 -91270245 + AT_rich Low_complexity Low_complexity 1 21 0 2198 164 28 28 chr10 54319425 54319858 -91269430 + Tigger2a DNA MER2_type 2 434 0 266 146 0 18 chr10 54319906 54319961 -91269327 + (TA)n Simple_repeat Simple_repeat 1 54 0 244 338 80 20 chr10 54320136 54320287 -91269001 - MIR SINE MIR -24 238 79 467 308 76 27 chr10 54320299 54320523 -91268765 + MIR SINE MIR 28 262 0 755 189 8 0 chr10 54321471 54321603 -91267685 + FLAM_C SINE Alu 1 133 0 1912 159 0 0 chr10 54322124 54322413 -91266875 + AluSx SINE Alu 1 289 -23 667 152 76 0 chr10 54322908 54323053 -91266235 - L1MA9 LINE L1 0 6312 6157 458 313 213 11 chr10 54323258 54323610 -91265678 + L2 LINE L2 2887 3309 -4 181 360 0 0 chr10 54323736 54323786 -91265502 + L3 LINE CR1 1514 1563 -14 642 297 64 72 chr10 54325466 54325773 -91263515 + L2 LINE L2 2917 3222 -91 225 0 0 0 chr10 54325773 54325798 -91263490 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 642 297 64 72 chr10 54325798 54325880 -91263408 + L2 LINE L2 3222 3303 -10 1504 141 38 0 chr10 54326585 54326848 -91262440 - L1MA5A LINE L1 -21 6276 6004 1646 177 0 38 chr10 54326935 54327243 -91262045 + AluJo SINE Alu 6 302 0 2185 122 0 3 chr10 54327773 54328069 -91261219 - AluSx SINE Alu -17 295 1 263 246 14 14 chr10 54328317 54328386 -91260902 + CT-rich Low_complexity Low_complexity 1 69 0 348 323 115 21 chr10 54328386 54328578 -91260710 + MIR SINE MIR 53 262 0 814 165 0 241 chr10 54328653 54329047 -91260241 - AluY SINE Alu -2 299 1 30 59 0 0 chr10 54329300 54329351 -91259937 + AT_rich Low_complexity Low_complexity 1 51 0 511 194 194 7 chr10 54329359 54329514 -91259774 + L1MC3 LINE L1 7602 7785 0 2821 16 0 0 chr10 54330841 54331155 -91258133 + AluYb8 SINE Alu 1 314 -4 466 228 129 45 chr10 54331161 54331385 -91257903 - MER112 DNA MER1_type -17 243 1 18887 101 16 9 chr10 54331393 54334080 -91255208 - Charlie3 DNA MER1_type -4 2706 1 1514 110 26 18 chr10 54334158 54334385 -91254903 - MER30 DNA MER1_type -1 229 1 25 0 0 0 chr10 54335369 54335394 -91253894 + AT_rich Low_complexity Low_complexity 1 25 0 644 281 85 27 chr10 54335784 54336044 -91253244 - Charlie8 DNA MER1_type -2141 276 2 2044 142 19 27 chr10 54336898 54337272 -91252016 + L1PA15 LINE L1 5793 6163 -2 2879 90 21 18 chr10 54339244 54339679 -91249609 + L1P4 LINE L1 5304 5739 -435 476 318 55 31 chr10 54339880 54340135 -91249153 + MIR SINE MIR 2 262 0 21 0 0 0 chr10 54340168 54340189 -91249099 + AT_rich Low_complexity Low_complexity 1 21 0 577 165 28 0 chr10 54341385 54341494 -91247794 - MER58 DNA MER1_type -3 2417 2306 573 204 0 44 chr10 54342220 54342270 -91247018 + Tigger3(Golem) DNA MER2_type 1 52 -2977 3282 129 0 73 chr10 54342270 54342843 -91246445 - LTR26B LTR ERV1 0 531 1 573 204 0 44 chr10 54342843 54342905 -91246383 + Tigger3(Golem) DNA MER2_type 52 108 -2921 * 2210 127 46 55 chr10 54342897 54343175 -91246113 + Tigger3(Golem) DNA MER2_type 2279 2553 -476 615 13 0 0 chr10 54343175 54343252 -91246036 - L1PA3 LINE L1 0 6155 6079 2210 127 46 55 chr10 54343252 54343447 -91245841 + Tigger3(Golem) DNA MER2_type 2553 2748 -281 4673 75 19 0 chr10 54343461 54344089 -91245199 + L1PA10 LINE L1 5529 6168 0 2516 143 18 9 chr10 54344090 54344538 -91244750 - L1MA4A LINE L1 -7 6296 5845 398 126 32 21 chr10 54344678 54344773 -91244515 + GA-rich Low_complexity Low_complexity 1 96 0 305 208 188 20 chr10 54344806 54344907 -91244381 - MIR SINE MIR -20 242 125 268 332 196 36 chr10 54345337 54345674 -91243614 + L2 LINE L2 2882 3272 0 545 237 80 27 chr10 54346880 54347104 -91242184 - L1MB7 LINE L1 0 6184 5949 195 42 0 0 chr10 54347105 54347129 -91242159 + (TTTC)n Simple_repeat Simple_repeat 3 26 0 2011 138 3 0 chr10 54347130 54347413 -91241875 - AluSx SINE Alu -28 284 1 1890 168 46 14 chr10 54347425 54347794 -91241494 - L1MA6 LINE L1 -22 6278 5898 326 325 90 10 chr10 54347995 54348195 -91241093 + L3 LINE CR1 1159 1374 -203 1847 159 0 17 chr10 54349109 54349410 -91239878 + AluJo SINE Alu 7 302 -10 314 238 75 0 chr10 54351239 54351319 -91237969 + Charlie1 DNA MER1_type 2676 2761 0 291 190 0 0 chr10 54351575 54351633 -91237655 + (CATATA)n Simple_repeat Simple_repeat 4 61 0 653 247 32 26 chr10 54351765 54351955 -91237333 + MIR SINE MIR 59 249 -13 25 0 0 0 chr10 54352267 54352292 -91236996 + AT_rich Low_complexity Low_complexity 1 25 0 1874 147 0 27 chr10 54353531 54353864 -91235424 + AluSx SINE Alu 1 325 0 216 322 122 0 chr10 54353864 54353954 -91235334 + L2 LINE L2 2685 2785 -529 562 263 8 8 chr10 54353974 54354107 -91235181 + MIR SINE MIR 107 239 -23 207 162 0 0 chr10 54354122 54354159 -91235129 + (ATG)n Simple_repeat Simple_repeat 3 39 0 1451 139 61 4 chr10 54354827 54355072 -91234216 - Tigger3(Golem) DNA MER2_type -2 3027 2769 433 257 101 0 chr10 54355073 54355182 -91234106 - L1M2 LINE L1 -5717 1132 1013 252 253 80 0 chr10 54355155 54355230 -91234058 + L1M2 LINE L1 978 1058 -5791 * 13454 189 58 50 chr10 54355214 54361543 -91227745 + L1MA4A LINE L1 37 6421 -584 3117 100 10 29 chr10 54361543 54362022 -91227266 - L1PA8 LINE L1 0 6172 5703 13454 189 58 50 chr10 54362022 54362262 -91227026 + L1MA4A LINE L1 6421 6658 -347 1704 176 58 0 chr10 54362674 54362952 -91226336 - AluSx SINE Alu -18 294 1 968 203 16 26 chr10 54363593 54363785 -91225503 + MER20 DNA MER1_type 30 219 0 1499 161 29 7 chr10 54364868 54365178 -91224110 - MER33 DNA MER1_type -1 323 7 220 228 44 9 chr10 54365316 54365430 -91223858 + GA-rich Low_complexity Low_complexity 5 122 0 212 196 0 18 chr10 54365472 54365528 -91223760 + T-rich Low_complexity Low_complexity 3 57 0 283 257 10 69 chr10 54365553 54365654 -91223634 + L2 LINE L2 3219 3313 0 432 0 0 0 chr10 54366116 54366164 -91223124 + (T)n Simple_repeat Simple_repeat 1 48 0 1440 160 128 18 chr10 54367307 54367588 -91221700 - AluJb SINE Alu 0 312 1 441 0 0 0 chr10 54367606 54367655 -91221633 + (TG)n Simple_repeat Simple_repeat 2 50 0 22 35 0 0 chr10 54367697 54367726 -91221562 + AT_rich Low_complexity Low_complexity 1 29 0 2128 126 0 0 chr10 54367837 54368131 -91221157 - AluSx SINE Alu -18 294 1 406 253 183 58 chr10 54368469 54368726 -91220562 - L2 LINE L2 0 3313 3025 26 0 0 0 chr10 54368881 54368907 -91220381 + AT_rich Low_complexity Low_complexity 1 26 0 194 361 84 12 chr10 54369305 54369388 -91219900 + L2 LINE L2 3118 3206 -66 2747 172 69 60 chr10 54369511 54370289 -91218999 - LTR1 LTR ERV1 0 785 1 2098 73 1 4 chr10 54371223 54371511 -91217777 - L1PA10 LINE L1 -202 5966 5687 189 300 25 117 chr10 54371923 54372043 -91217245 + MIR3 SINE MIR 13 121 -87 408 326 41 14 chr10 54372133 54372354 -91216934 + L2 LINE L2 2393 2619 -695 350 327 75 0 chr10 54373380 54373539 -91215749 - MIR SINE MIR -19 243 73 22 35 0 0 chr10 54374020 54374049 -91215239 + AT_rich Low_complexity Low_complexity 1 29 0 3513 145 2 12 chr10 54374288 54374869 -91214419 + L1PA16 LINE L1 5582 6156 -10 200 227 0 0 chr10 54375962 54376006 -91213282 + (TAA)n Simple_repeat Simple_repeat 2 45 0 449 253 92 29 chr10 54376423 54376597 -91212691 + MIR SINE MIR 8 192 -70 212 286 13 65 chr10 54376865 54376942 -91212346 - L2 LINE L2 -2 3270 3198 221 287 23 69 chr10 54377102 54377189 -91212099 - MER5A DNA MER1_type -40 149 67 2170 123 3 0 chr10 54378076 54378377 -91210911 + AluSx SINE Alu 3 304 -8 202 262 0 0 chr10 54379002 54379044 -91210244 - MIR SINE MIR -116 146 105 190 306 71 24 chr10 54379615 54379700 -91209588 - L2 LINE L2 -1 3312 3224 222 91 0 0 chr10 54379875 54379908 -91209380 + (TG)n Simple_repeat Simple_repeat 1 33 0 331 316 17 34 chr10 54382231 54382348 -91206940 - MER5A DNA MER1_type -73 116 2 2129 127 0 3 chr10 54382464 54382755 -91206533 - AluSx SINE Alu -19 293 4 1477 182 14 30 chr10 54382764 54383060 -91206228 - AluJo SINE Alu -21 291 1 1384 191 0 4 chr10 54383798 54384029 -91205259 + AluJo SINE Alu 2 231 -81 1812 154 4 7 chr10 54384087 54384360 -91204928 + AluSx SINE Alu 9 280 -32 239 0 0 31 chr10 54384360 54384392 -91204896 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 339 337 36 98 chr10 54384440 54384561 -91204727 + L2 LINE L2 3011 3138 -134 2050 108 14 0 chr10 54384561 54384863 -91204425 - AluSg SINE Alu 0 306 1 339 337 36 98 chr10 54384863 54385016 -91204272 + L2 LINE L2 3138 3269 -3 1106 107 0 0 chr10 54388290 54388439 -91200849 + AluY SINE Alu 1 149 -162 21 0 0 0 chr10 54389617 54389638 -91199650 + AT_rich Low_complexity Low_complexity 1 21 0 888 234 34 10 chr10 54389943 54390152 -91199136 + MIR SINE MIR 18 231 -31 602 221 68 6 chr10 54391262 54391425 -91197863 + FAM SINE Alu 1 173 -2 4237 146 53 26 chr10 54391426 54392269 -91197019 - Ricksha DNA DNA -169 3082 2217 861 161 28 28 chr10 54392270 54392450 -91196838 + AluSx SINE Alu 1 180 -132 868 218 86 23 chr10 54394730 54394987 -91194301 - MLT1B LTR MaLR -3 387 115 6886 52 9 0 chr10 54395300 54396159 -91193129 + L1PA6 LINE L1 5273 6139 -15 240 286 16 0 chr10 54396604 54396667 -91192621 - L2 LINE L2 -4 3268 3205 274 305 68 62 chr10 54397730 54397907 -91191381 + HsTC2 DNA Tc2 671 848 -1050 460 245 256 42 chr10 54398278 54398744 -91190544 + L2 LINE L2 2708 3276 -37 495 333 61 43 chr10 54398749 54399143 -91190145 + L1MEd LINE L1 152 552 -5567 22 35 0 0 chr10 54399312 54399341 -91189947 + AT_rich Low_complexity Low_complexity 1 29 0 441 0 0 0 chr10 54399383 54399432 -91189856 + (CA)n Simple_repeat Simple_repeat 2 50 0 1440 160 128 18 chr10 54399450 54399731 -91189557 + AluJb SINE Alu 1 312 0 441 0 0 0 chr10 54400398 54400447 -91188841 + (A)n Simple_repeat Simple_repeat 1 49 0 801 195 25 42 chr10 54400934 54401170 -91188118 - L1MC1 LINE L1 -15 6318 6087 253 286 83 0 chr10 54401669 54401753 -91187535 + MER112 DNA MER1_type 2 92 -168 2157 99 44 0 chr10 54401962 54402256 -91187032 + AluSq SINE Alu 1 307 -6 277 315 41 27 chr10 54402752 54402898 -91186390 + MIR SINE MIR 36 183 -79 276 30 0 0 chr10 54403561 54403594 -91185694 + (CA)n Simple_repeat Simple_repeat 2 34 0 186 255 21 0 chr10 54403655 54403702 -91185586 - L2 LINE L2 0 3313 3266 27 92 0 0 chr10 54404847 54404923 -91184365 + AT_rich Low_complexity Low_complexity 1 76 0 282 321 19 19 chr10 54405222 54405328 -91183960 - MIR SINE MIR -151 111 6 329 0 24 0 chr10 54407643 54407684 -91181604 + (TAGA)n Simple_repeat Simple_repeat 4 45 0 2163 123 25 27 chr10 54407709 54408074 -91181214 - THE1B LTR MaLR 0 364 1 180 0 0 0 chr10 54408329 54408349 -91180939 + (A)n Simple_repeat Simple_repeat 1 20 0 1306 170 17 4 chr10 54408538 54408768 -91180520 - AluJb SINE Alu -79 233 1 22 0 0 0 chr10 54408768 54408790 -91180498 + AT_rich Low_complexity Low_complexity 1 22 0 2762 201 112 10 chr10 54408849 54409460 -91179828 - L1MB8 LINE L1 0 6178 5490 2553 130 71 48 chr10 54409460 54409936 -91179352 + LTR45B LTR ERV1 3 489 0 2762 201 112 10 chr10 54409936 54410002 -91179286 - L1MB8 LINE L1 -688 5490 5432 412 175 272 0 chr10 54410002 54410148 -91179140 - AluSg/x SINE Alu 0 311 135 514 165 19 0 chr10 54410148 54410251 -91179037 - L1MB8 LINE L1 -743 5441 5337 302 150 33 0 chr10 54410588 54410648 -91178640 + AluSc SINE Alu 236 297 -2 218 341 100 45 chr10 54410757 54410977 -91178311 - L2 LINE L2 -214 3058 2827 1008 188 15 25 chr10 54411095 54411292 -91177996 - MER20 DNA MER1_type -22 197 3 1583 199 6 16 chr10 54411865 54412176 -91177112 - Ricksha DNA DNA -1749 1497 1190 2508 134 113 0 chr10 54412183 54412617 -91176671 - Ricksha DNA DNA -2750 496 14 4509 95 8 3 chr10 54412639 54413262 -91176026 - L1PA7 LINE L1 0 6154 5529 999 123 72 41 chr10 54413276 54413471 -91175817 - Tigger3(Golem) DNA MER2_type -281 2748 2548 617 0 0 0 chr10 54413471 54413544 -91175744 + L1PA3 LINE L1 6079 6151 -4 4531 118 54 8 chr10 54413654 54414431 -91174857 + L1MA7 LINE L1 5479 6291 0 457 97 0 0 chr10 54415157 54415219 -91174069 + Alu SINE Alu 1 62 -256 274 294 0 33 chr10 54415596 54415688 -91173600 + MARNA DNA Mariner 105 193 -393 491 340 51 16 chr10 54415759 54415973 -91173315 - MARNA DNA Mariner -227 359 129 1698 173 10 10 chr10 54415973 54416268 -91173020 + AluSx SINE Alu 1 295 -17 491 340 51 16 chr10 54416268 54416368 -91172920 - MARNA DNA Mariner -457 129 34 481 166 331 28 chr10 54416984 54417129 -91172159 + MER5A DNA MER1_type 1 189 0 553 153 36 9 chr10 54420330 54420441 -91168847 + L1MD3 LINE L1 7874 7987 -8 345 258 32 85 chr10 54420454 54420702 -91168586 - L2 LINE L2 -612 2702 2468 326 416 22 0 chr10 54420730 54420915 -91168373 + L2 LINE L2 2689 2877 -437 183 383 64 11 chr10 54421309 54421403 -91167885 - MIR SINE MIR -161 101 3 1669 161 9 43 chr10 54421541 54421864 -91167424 + AluJb SINE Alu 1 312 0 231 285 53 0 chr10 54422837 54422988 -91166300 + (CCTG)n Simple_repeat Simple_repeat 1 159 0 285 252 12 27 chr10 54425568 54425676 -91163612 - MIR SINE MIR -82 126 25 21 36 0 0 chr10 54525741 54525769 -91063519 + AT_rich Low_complexity Low_complexity 1 28 0 315 0 0 0 chr10 54526220 54526255 -91063033 + (CA)n Simple_repeat Simple_repeat 2 36 0 502 263 215 14 chr10 54529183 54529392 -91059896 + MIR SINE MIR 2 252 -10 245 265 12 72 chr10 54529463 54529498 -91059790 - MIR SINE MIR -144 118 82 6829 180 74 34 chr10 54529498 54530734 -91058554 + HSMAR1 DNA Mariner 1 1286 -1 245 265 12 72 chr10 54530734 54530781 -91058507 - MIR SINE MIR -180 82 41 474 217 22 0 chr10 54530854 54530946 -91058342 + MER5A DNA MER1_type 2 95 -94 234 300 14 0 chr10 54531185 54531255 -91058033 + MIR SINE MIR 76 146 -62 334 349 72 30 chr10 54531656 54531822 -91057466 + MIR3 SINE MIR 29 201 -7 182 287 61 67 chr10 54532871 54533035 -91056253 - L2 LINE L2 -444 2870 2708 1641 186 3 23 chr10 54534161 54534467 -91054821 - AluJb SINE Alu -12 300 1 2750 173 107 14 chr10 54534830 54535421 -91053867 + MER39 LTR ERV1 62 707 0 665 269 24 0 chr10 54535422 54535589 -91053699 + MER45A DNA AcHobo 8 178 0 190 191 16 32 chr10 54536707 54536770 -91052518 + (CATATA)n Simple_repeat Simple_repeat 4 65 0 22 35 0 0 chr10 54537370 54537399 -91051889 + AT_rich Low_complexity Low_complexity 1 29 0 290 257 88 61 chr10 54541209 54541320 -91047968 - L2 LINE L2 -4 3309 3192 1404 170 99 46 chr10 54541320 54541644 -91047644 + MER58B DNA MER1_type 1 341 0 290 257 88 61 chr10 54541644 54541680 -91047608 - L2 LINE L2 -121 3192 3158 1205 208 67 25 chr10 54541818 54542145 -91047143 + MLT1A2 LTR MaLR 2 342 -32 1850 145 108 6 chr10 54542145 54542477 -91046811 + MER47A DNA MER2_type 1 366 0 1482 197 129 23 chr10 54542536 54542977 -91046311 + Charlie4a DNA MER1_type 21 508 0 306 153 0 0 chr10 54543637 54543696 -91045592 + (CAGAGA)n Simple_repeat Simple_repeat 2 60 0 4084 176 12 17 chr10 54544326 54545139 -91044149 + L1MB4 LINE L1 5354 6162 -18 27 68 0 14 chr10 54545139 54545198 -91044090 + AT_rich Low_complexity Low_complexity 1 60 -12 186 118 0 0 chr10 54545198 54545232 -91044056 + (TATAA)n Simple_repeat Simple_repeat 5 38 0 27 68 0 14 chr10 54545232 54545245 -91044043 + AT_rich Low_complexity Low_complexity 60 72 0 235 139 49 25 chr10 54545280 54545402 -91043886 + (TATAA)n Simple_repeat Simple_repeat 5 129 0 25 31 0 0 chr10 54545453 54545485 -91043803 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr10 54545583 54545604 -91043684 + AT_rich Low_complexity Low_complexity 1 21 0 467 208 30 0 chr10 54545842 54545943 -91043345 - MLT2B2 LTR ERVL -4 511 408 * 1377 179 17 0 chr10 54545932 54546167 -91043121 - MLT2B2 LTR ERVL -276 239 1 1168 206 48 3 chr10 54546247 54546557 -91042731 + MER33 DNA MER1_type 1 324 0 301 302 208 25 chr10 54547773 54547975 -91041313 - MIR SINE MIR -14 248 10 990 170 32 0 chr10 54548010 54548228 -91041060 - L1MA8 LINE L1 -3 6288 6064 1928 207 30 19 chr10 54548248 54548717 -91040571 - L1 LINE L1 -3325 4240 3767 2095 135 0 7 chr10 54548718 54549014 -91040274 + AluSx SINE Alu 1 294 -18 1490 258 88 58 chr10 54549032 54549849 -91039439 - L1 LINE L1 -4706 2859 2018 183 281 91 41 chr10 54551233 54551354 -91037934 + L3b LINE CR1 1147 1273 -310 364 327 47 0 chr10 54551436 54551543 -91037745 - L2 LINE L2 -7 3265 3154 259 362 136 13 chr10 54551684 54551919 -91037369 + L3 LINE CR1 1281 1544 -33 226 411 80 6 chr10 54552242 54552405 -91036883 + MIR SINE MIR 58 232 -30 1993 141 3 3 chr10 54552659 54552958 -91036330 + AluSq SINE Alu 1 299 -14 310 250 171 0 chr10 54553025 54553113 -91036175 + L2 LINE L2 3168 3270 -2 229 284 0 45 chr10 54553228 54553295 -91035993 + L3 LINE CR1 246 309 -1268 202 322 114 20 chr10 54556028 54556177 -91033111 - L2 LINE L2 -4 3309 3147 23 0 0 0 chr10 54557634 54557657 -91031631 + AT_rich Low_complexity Low_complexity 1 23 0 655 204 97 23 chr10 54559020 54559196 -91030092 - MER5A DNA MER1_type 0 189 1 1745 176 0 14 chr10 54559200 54559496 -91029792 + AluSx SINE Alu 1 292 -20 26 0 0 0 chr10 54559641 54559667 -91029621 + AT_rich Low_complexity Low_complexity 1 26 0 187 300 0 0 chr10 54559889 54559939 -91029349 - MER5A DNA MER1_type -1 188 139 762 243 41 49 chr10 54559954 54560013 -91029275 + MIR SINE MIR 2 60 -202 2013 128 19 48 chr10 54560013 54560388 -91028900 - THE1B LTR MaLR 0 364 1 762 243 41 49 chr10 54560388 54560571 -91028717 + MIR SINE MIR 60 242 -20 433 139 63 0 chr10 54560606 54560685 -91028603 - Tigger5 DNA MER2_type 0 2323 2240 233 200 0 0 chr10 54560684 54560729 -91028559 - Tigger5 DNA MER2_type -28 2295 2251 * 376 164 0 0 chr10 54560698 54560753 -91028535 - Tigger5 DNA MER2_type -2268 55 1 231 36 0 0 chr10 54561701 54561729 -91027559 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 22 0 0 0 chr10 54562535 54562557 -91026731 + AT_rich Low_complexity Low_complexity 1 22 0 187 266 125 0 chr10 54564704 54564768 -91024520 + L2 LINE L2 3191 3262 -10 3205 145 39 19 chr10 54564903 54565491 -91023797 + L1MC1 LINE L1 5733 6332 -1 316 306 118 0 chr10 54565611 54565781 -91023507 + MIR SINE MIR 72 261 -1 1796 159 3 3 chr10 54566084 54566395 -91022893 - AluSx SINE Alu 0 311 1 365 277 67 25 chr10 54566836 54566955 -91022333 - MIR SINE MIR -87 175 52 1929 129 11 3 chr10 54567059 54567371 -91021917 + AluSq SINE Alu 6 319 0 1652 190 7 13 chr10 54568729 54569029 -91020259 + AluJb SINE Alu 1 298 -14 2259 71 3 3 chr10 54569062 54569395 -91019893 + AluY SINE Alu 1 333 0 27 0 0 0 chr10 54569576 54569603 -91019685 + AT_rich Low_complexity Low_complexity 1 27 0 2064 138 3 6 chr10 54569620 54569932 -91019356 - AluSx SINE Alu -1 311 1 1304 183 70 0 chr10 54570108 54570409 -91018879 + MER33 DNA MER1_type 2 323 -1 352 118 21 86 chr10 54571163 54571204 -91018084 - LTR43 LTR ERV1 -345 257 215 4536 66 0 5 chr10 54571204 54571792 -91017496 - L1PA8 LINE L1 0 6172 5588 2278 97 0 23 chr10 54571794 54572102 -91017186 - AluSx SINE Alu -11 301 1 352 118 21 86 chr10 54572102 54572150 -91017138 - LTR43 LTR ERV1 -388 214 171 318 87 0 0 chr10 54572286 54572332 -91016956 + (TG)n Simple_repeat Simple_repeat 2 47 0 2187 125 0 0 chr10 54572995 54573300 -91015988 - AluSx SINE Alu -7 305 1 1788 168 7 3 chr10 54573361 54573659 -91015629 + AluSx SINE Alu 1 299 -13 298 280 43 54 chr10 54575451 54575544 -91013744 + MIR3 SINE MIR 15 106 -102 1384 178 15 89 chr10 54575755 54576081 -91013207 - AluJo SINE Alu -10 302 1 2551 135 28 30 chr10 54576213 54576642 -91012646 - MSTC LTR MaLR 0 428 1 1790 206 11 8 chr10 54577248 54577612 -91011676 + MLT1A1 LTR MaLR 1 365 0 269 330 80 0 chr10 54578053 54578141 -91011147 + L2 LINE L2 3219 3313 0 225 0 0 0 chr10 54578344 54578369 -91010919 + (T)n Simple_repeat Simple_repeat 1 25 0 686 236 17 11 chr10 54578373 54578551 -91010737 - MLT1A2 LTR MaLR -2 388 210 3307 129 15 65 chr10 54578557 54579145 -91010143 - MER61E LTR ERV1 -4 565 7 766 225 6 44 chr10 54579146 54579328 -91009960 - MLT1A2 LTR MaLR -176 198 24 365 374 16 33 chr10 54580045 54580227 -91009061 + MIR3 SINE MIR 12 190 -18 32 0 0 0 chr10 54580532 54580564 -91008724 + AT_rich Low_complexity Low_complexity 1 32 0 360 319 26 9 chr10 54581687 54581803 -91007485 + MER5A DNA MER1_type 72 189 0 1330 119 17 42 chr10 54582277 54582513 -91006775 + MER30 DNA MER1_type 1 230 0 2180 121 12 21 chr10 54583014 54583354 -91005934 + MER1B DNA MER1_type 1 337 0 1960 161 17 23 chr10 54583404 54583632 -91005656 - MER7A DNA MER2_type -2693 345 120 409 145 0 36 chr10 54583632 54583715 -91005573 - MADE1 DNA Mariner 0 80 1 1960 161 17 23 chr10 54583715 54583835 -91005453 - MER7A DNA MER2_type -2918 120 1 664 300 69 24 chr10 54584643 54584933 -91004355 + L1ME LINE L1 5483 5785 -336 237 231 147 58 chr10 54586271 54586416 -91002872 - MIR SINE MIR -60 148 30 201 237 0 0 chr10 54586532 54586591 -91002697 + A-rich Low_complexity Low_complexity 1 59 0 24 0 0 0 chr10 54586606 54586630 -91002658 + AT_rich Low_complexity Low_complexity 1 24 0 526 56 74 0 chr10 54586738 54586846 -91002442 + (TA)n Simple_repeat Simple_repeat 2 117 0 2386 77 3 6 chr10 54587904 54588216 -91001072 - AluY SINE Alu 0 311 1 598 297 0 47 chr10 54588221 54588433 -91000855 - MIR SINE MIR -19 243 42 1878 182 82 53 chr10 54588577 54589067 -91000221 + MLT1D LTR MaLR 2 505 0 233 235 206 0 chr10 54589164 54589232 -91000056 - MER81 DNA DNA -32 82 1 21 36 0 0 chr10 54590060 54590088 -90999200 + AT_rich Low_complexity Low_complexity 1 28 0 294 224 133 99 chr10 54590153 54590447 -90998841 - L1MC4a LINE L1 -98 6023 5718 213 309 0 0 chr10 54591630 54591685 -90997603 + L2 LINE L2 3255 3309 -4 229 302 58 12 chr10 54592290 54592376 -90996912 + MIR SINE MIR 23 112 -150 180 0 0 0 chr10 54592504 54592524 -90996764 + (TC)n Simple_repeat Simple_repeat 2 21 0 246 156 0 0 chr10 54592525 54592570 -90996718 + (TG)n Simple_repeat Simple_repeat 2 46 0 196 194 0 32 chr10 54592733 54592795 -90996493 + (TA)n Simple_repeat Simple_repeat 1 60 0 266 179 39 13 chr10 54592816 54592894 -90996394 + (TA)n Simple_repeat Simple_repeat 1 80 0 443 286 13 13 chr10 54592993 54593147 -90996141 - MER117 DNA MER1_type 0 197 44 783 181 5 85 chr10 54593511 54593710 -90995578 - MER20 DNA MER1_type -1 218 36 228 243 108 36 chr10 54593736 54593847 -90995441 - L1MC4a LINE L1 -1785 6023 5905 1435 255 99 23 chr10 54593859 54594466 -90994822 - L1MC4a LINE L1 -801 5345 5175 255 61 0 0 chr10 54594478 54594511 -90994777 + (CATATA)n Simple_repeat Simple_repeat 2 34 0 2102 134 0 0 chr10 54594524 54594814 -90994474 + AluSq SINE Alu 1 290 -23 325 341 45 27 chr10 54594853 54595076 -90994212 - L1MC4a LINE L1 -1038 5108 4882 283 228 13 51 chr10 54595101 54595180 -90994108 + MER69 DNA AcHobo 2451 2526 0 25 75 0 0 chr10 54595218 54595271 -90994017 + AT_rich Low_complexity Low_complexity 1 53 0 215 343 29 43 chr10 54595644 54595784 -90993504 - MIR SINE MIR -115 147 10 646 221 8 0 chr10 54596205 54596327 -90992961 + AluJb SINE Alu 12 134 -178 354 61 0 0 chr10 54596332 54596381 -90992907 + (CA)n Simple_repeat Simple_repeat 2 50 0 575 188 70 31 chr10 54597124 54597272 -90992016 - FLAM_A SINE Alu 0 153 1 32 43 0 0 chr10 54597424 54597470 -90991818 + AT_rich Low_complexity Low_complexity 1 46 0 374 317 59 27 chr10 54597806 54597992 -90991296 - MIR3 SINE MIR -6 202 11 293 302 108 36 chr10 54599428 54599567 -90989721 - MIR SINE MIR -71 191 43 249 263 0 13 chr10 54600669 54600745 -90988543 + HsTC2 DNA Tc2 1 75 -1823 740 108 9 0 chr10 54601800 54601911 -90987377 + AluSc SINE Alu 194 305 -4 24 0 0 0 chr10 54601920 54601944 -90987344 + AT_rich Low_complexity Low_complexity 1 24 0 218 173 0 19 chr10 54602287 54602339 -90986949 + (CATATA)n Simple_repeat Simple_repeat 4 54 0 198 303 0 0 chr10 54602791 54602857 -90986431 + MIR SINE MIR 153 218 -44 2032 141 0 0 chr10 54603019 54603316 -90985972 + AluSx SINE Alu 1 297 -15 457 337 28 87 chr10 54603481 54603769 -90985519 + L2 LINE L2 3001 3271 -1 342 331 136 0 chr10 54603869 54604023 -90985265 + L3 LINE CR1 1399 1573 -4 1856 140 4 4 chr10 54604159 54604484 -90984804 + AluSx SINE Alu 4 328 0 275 96 17 58 chr10 54606811 54606847 -90982441 + L1MA6 LINE L1 5777 5814 -342 2752 165 4 17 chr10 54606847 54607369 -90981919 + L1MA6 LINE L1 5786 6300 0 275 96 17 58 chr10 54607369 54607398 -90981890 + L1MA6 LINE L1 5814 5843 -313 421 258 97 43 chr10 54607398 54607584 -90981704 + MIR SINE MIR 66 261 -1 781 245 108 16 chr10 54607920 54608314 -90980974 + LTR48 LTR ERV1 226 740 -47 504 262 0 0 chr10 54608420 54608542 -90980746 + MER58 DNA MER1_type 2299 2420 0 321 286 15 45 chr10 54608919 54609052 -90980236 - L1ME4a LINE L1 -31 6090 5962 496 298 69 16 chr10 54609081 54609269 -90980019 + MLT1J LTR MaLR 110 307 -204 401 229 14 49 chr10 54609512 54609656 -90979632 + L1ME4a LINE L1 5982 6120 -1 23 0 0 0 chr10 54609737 54609760 -90979528 + AT_rich Low_complexity Low_complexity 1 23 0 2169 122 0 0 chr10 54610062 54610374 -90978914 + AluSx SINE Alu 1 312 0 198 0 0 0 chr10 54610958 54610980 -90978308 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 288 276 93 84 chr10 54611122 54611495 -90977793 - L1MC4 LINE L1 -15 8027 7648 1390 221 81 85 chr10 54611495 54612039 -90977249 + MLT1F LTR MaLR 1 542 0 288 276 93 84 chr10 54612039 54612093 -90977195 - L1MC4 LINE L1 -394 7648 7596 553 314 11 5 chr10 54612285 54612470 -90976818 - L1MC4 LINE L1 -566 7476 7291 184 365 52 10 chr10 54613453 54613549 -90975739 - L3b LINE CR1 -123 1460 1361 203 401 98 0 chr10 54614701 54614833 -90974455 - L3 LINE CR1 -1066 511 367 2622 150 17 0 chr10 54615978 54616397 -90972891 + MSTB LTR MaLR 1 426 0 1967 166 0 0 chr10 54616750 54617057 -90972231 + AluJo SINE Alu 1 307 -5 417 183 226 0 chr10 54617714 54617829 -90971459 - Charlie1 DNA MER1_type -2 2759 2619 * 674 256 155 5 chr10 54617811 54618018 -90971270 - Charlie1 DNA MER1_type -2521 240 3 596 137 20 196 chr10 54618442 54619095 -90970193 - L1MA2 LINE L1 -241 6063 5519 249 216 39 0 chr10 54619096 54619147 -90970141 - L1M4 LINE L1 -1287 4859 4807 2443 258 34 7 chr10 54619397 54620071 -90969217 + L1ME3 LINE L1 5471 6162 0 29 84 0 0 chr10 54620718 54620789 -90968499 + AT_rich Low_complexity Low_complexity 1 71 0 2553 136 18 43 chr10 54621326 54621742 -90967546 + MSTB1 LTR MaLR 1 355 -41 2782 16 0 0 chr10 54621742 54622053 -90967235 - AluYa5 SINE Alu 0 311 1 2553 136 18 43 chr10 54622053 54622094 -90967194 + MSTB1 LTR MaLR 355 396 0 198 167 0 0 chr10 54622909 54622945 -90966343 + A-rich Low_complexity Low_complexity 5 40 0 3552 56 2 6 chr10 54623113 54623579 -90965709 + L1PA7 LINE L1 5689 6152 -2 371 249 88 95 chr10 54623709 54624014 -90965274 - L1MC4 LINE L1 -215 7827 7525 9266 197 58 63 chr10 54624170 54624716 -90964572 + Charlie1 DNA MER1_type 1 548 -2213 2235 115 3 6 chr10 54624716 54625030 -90964258 + AluSp SINE Alu 1 313 0 9266 197 58 63 chr10 54625030 54625152 -90964136 + Charlie1 DNA MER1_type 548 669 -2092 306 146 0 0 chr10 54625152 54625207 -90964081 + L1MA4A LINE L1 6238 6292 -11 9266 197 58 63 chr10 54625207 54626973 -90962315 + Charlie1 DNA MER1_type 669 2442 -319 2137 182 41 7 chr10 54626973 54627385 -90961903 - MSTB LTR MaLR 0 426 1 9266 197 58 63 chr10 54627385 54627438 -90961850 + Charlie1 DNA MER1_type 2442 2494 -267 222 37 0 0 chr10 54627438 54627465 -90961823 + (TA)n Simple_repeat Simple_repeat 1 27 0 1632 135 42 8 chr10 54627465 54627724 -90961564 - AluSx SINE Alu -17 295 28 9266 197 58 63 chr10 54627724 54627929 -90961359 + Charlie1 DNA MER1_type 2492 2684 -77 22 25 0 25 chr10 54628279 54628299 -90960989 + AT_rich Low_complexity Low_complexity 1 20 -19 1442 188 64 25 chr10 54628299 54628581 -90960707 - AluJb SINE Alu -19 293 1 22 25 0 25 chr10 54628581 54628600 -90960688 + AT_rich Low_complexity Low_complexity 20 39 0 1371 271 63 69 chr10 54628627 54629494 -90959794 - L2 LINE L2 0 3313 2454 21 36 0 0 chr10 54629512 54629540 -90959748 + AT_rich Low_complexity Low_complexity 1 28 0 190 284 45 90 chr10 54630045 54630200 -90959088 + L2 LINE L2 2611 2758 -556 304 350 33 25 chr10 54630334 54630454 -90958834 + MIR SINE MIR 3 123 -139 306 60 0 40 chr10 54630468 54630518 -90958770 - AluJo SINE Alu 0 302 255 1039 185 5 21 chr10 54630518 54630707 -90958581 - AluJo SINE Alu -126 186 1 298 350 49 0 chr10 54630707 54630830 -90958458 + MIR SINE MIR 120 248 -14 180 172 31 78 chr10 54631021 54631085 -90958203 - L3b LINE CR1 -354 1229 1169 356 323 99 31 chr10 54631585 54631777 -90957511 - MER115 DNA AcHobo -341 352 148 1574 176 72 0 chr10 54632553 54632872 -90956416 - L1MB3 LINE L1 0 6183 5842 456 304 99 0 chr10 54633278 54633459 -90955829 + MIR SINE MIR 50 248 -14 456 301 40 35 chr10 54633592 54633765 -90955523 + MER91A DNA MER1_type 1 174 -22 459 276 56 0 chr10 54634326 54634478 -90954810 - MER20B DNA MER1_type 0 219 58 847 224 78 24 chr10 54635286 54635491 -90953797 + MER58A DNA MER1_type 5 220 -4 189 263 70 35 chr10 54635532 54635589 -90953699 + L2 LINE L2 3208 3266 -6 1634 187 3 11 chr10 54635870 54636154 -90953134 - AluJo SINE Alu -30 282 1 1991 142 0 0 chr10 54636179 54636460 -90952828 - AluSx SINE Alu -31 281 1 7353 41 5 0 chr10 54636892 54638072 -90951216 + L1PA5 LINE L1 4971 6154 0 338 330 20 0 chr10 54638168 54638268 -90951020 + MIR SINE MIR 53 154 -108 238 328 57 68 chr10 54638274 54638466 -90950822 - MIR SINE MIR -58 204 15 1547 167 33 38 chr10 54638911 54639277 -90950011 - L1MA10 LINE L1 0 6334 5971 2327 182 11 54 chr10 54639291 54639824 -90949464 + L1MB1 LINE L1 5254 5763 -405 1783 164 7 0 chr10 54639848 54640134 -90949154 + AluSx SINE Alu 1 288 -24 693 279 42 5 chr10 54640157 54640373 -90948915 - MER8 DNA MER2_type 0 345 1 759 206 29 6 chr10 54640377 54640547 -90948741 + L1MB1 LINE L1 5788 5961 -228 23 68 0 0 chr10 54640836 54640880 -90948408 + AT_rich Low_complexity Low_complexity 1 44 0 942 184 6 45 chr10 54640944 54641123 -90948165 + FRAM SINE Alu 1 172 -4 204 291 126 19 chr10 54641786 54641889 -90947399 + MIR SINE MIR 66 179 -83 * 361 232 30 154 chr10 54641861 54642094 -90947194 - MIR SINE MIR 0 262 59 412 304 14 7 chr10 54642201 54642339 -90946949 + MLT1H1 LTR MaLR 3 141 -414 254 253 163 9 chr10 54642492 54642601 -90946687 + MLT1H LTR MaLR 436 522 -27 2703 29 3 0 chr10 54642658 54642968 -90946320 - AluY SINE Alu 0 311 1 186 43 0 0 chr10 54643084 54643107 -90946181 + (T)n Simple_repeat Simple_repeat 1 23 0 2388 172 31 79 chr10 54643688 54644234 -90945054 - MLT2B1 LTR ERVL 0 520 1 956 242 104 48 chr10 54645454 54645896 -90943392 + MLT1H LTR MaLR 83 549 0 318 312 94 45 chr10 54645903 54646083 -90943205 + L2 LINE L2 2800 2986 -286 212 300 17 0 chr10 54646248 54646308 -90942980 + L2 LINE L2 3252 3312 -1 223 355 64 0 chr10 54647104 54647214 -90942074 + MER91C DNA MER1_type 20 136 -4 273 210 0 0 chr10 54648865 54648927 -90940361 + (CATA)n Simple_repeat Simple_repeat 2 63 0 24 67 0 0 chr10 54648930 54648975 -90940313 + AT_rich Low_complexity Low_complexity 1 45 0 22 0 0 0 chr10 54649037 54649059 -90940229 + AT_rich Low_complexity Low_complexity 1 22 0 355 185 172 56 chr10 54649904 54649998 -90939290 + FLAM_A SINE Alu 8 101 -32 1442 275 108 7 chr10 54650079 54650522 -90938766 - LTR16C LTR ERVL 0 491 4 189 0 0 0 chr10 54650888 54650909 -90938379 + (TG)n Simple_repeat Simple_repeat 2 22 0 235 161 16 16 chr10 54651169 54651231 -90938057 + GA-rich Low_complexity Low_complexity 2 63 0 21 36 0 0 chr10 54651447 54651475 -90937813 + AT_rich Low_complexity Low_complexity 1 28 0 701 185 8 0 chr10 54651562 54651681 -90937607 + FLAM_A SINE Alu 1 120 -13 186 189 0 0 chr10 54651681 54651718 -90937570 + (CAAT)n Simple_repeat Simple_repeat 4 40 0 262 229 133 24 chr10 54652148 54652231 -90937057 + L2 LINE L2 3207 3298 -15 403 235 73 52 chr10 54652238 54652374 -90936914 - MIR SINE MIR -67 195 57 2266 107 0 3 chr10 54653304 54653604 -90935684 + AluSx SINE Alu 1 299 -13 23 33 0 0 chr10 54653605 54653635 -90935653 + AT_rich Low_complexity Low_complexity 1 30 0 35 24 0 0 chr10 54654175 54654217 -90935071 + AT_rich Low_complexity Low_complexity 1 42 0 247 152 182 0 chr10 54654265 54654331 -90934957 + MER116 DNA Mariner 2 79 -1 593 289 51 20 chr10 54654740 54654937 -90934351 - MIR SINE MIR -18 244 42 1840 278 88 38 chr10 54655073 54655713 -90933575 - MER45C DNA AcHobo -8 945 274 275 281 56 0 chr10 54655792 54655881 -90933407 - MER45C DNA AcHobo -787 166 73 23 78 0 0 chr10 54658636 54658687 -90930601 + AT_rich Low_complexity Low_complexity 1 51 0 296 374 98 25 chr10 54659439 54660009 -90929279 + L2 LINE L2 2366 2977 -337 24 91 0 0 chr10 54660913 54660979 -90928309 + AT_rich Low_complexity Low_complexity 1 66 0 21 57 0 0 chr10 54661249 54661284 -90928004 + AT_rich Low_complexity Low_complexity 1 35 0 411 283 18 9 chr10 54662974 54663087 -90926201 - MER81 DNA DNA 0 114 1 884 204 74 22 chr10 54663310 54663628 -90925660 - MSTD LTR MaLR -2 394 1 211 232 71 0 chr10 54664233 54664289 -90924999 - MIR SINE MIR -18 244 185 1007 256 68 124 chr10 54664348 54665343 -90923945 + MER52A LTR ERV1 660 1755 0 370 273 172 38 chr10 54665927 54666136 -90923152 + MIR SINE MIR 15 251 -11 1196 287 30 30 chr10 54666541 54666942 -90922346 + MLT1I LTR MaLR 5 405 -4 271 290 37 89 chr10 54666955 54667169 -90922119 + MIR SINE MIR 15 217 -45 210 171 0 0 chr10 54667581 54667622 -90921666 + T-rich Low_complexity Low_complexity 1 41 0 227 244 0 0 chr10 54668419 54668464 -90920824 + L2 LINE L2 3216 3260 -12 444 30 91 0 chr10 54668699 54668798 -90920490 + (TA)n Simple_repeat Simple_repeat 1 108 0 246 109 26 22 chr10 54668918 54668977 -90920311 - L1M2 LINE L1 -469 5831 5772 23 0 0 0 chr10 54669117 54669140 -90920148 + AT_rich Low_complexity Low_complexity 1 23 0 1821 162 6 29 chr10 54669219 54669534 -90919754 + AluJb SINE Alu 4 311 -1 420 122 92 0 chr10 54669547 54669645 -90919643 + A-rich Low_complexity Low_complexity 3 109 0 321 264 0 47 chr10 54670290 54670396 -90918892 + L2 LINE L2 3213 3313 0 2468 141 30 11 chr10 54670467 54670906 -90918382 - L1M2 LINE L1 -506 5785 5339 1542 161 0 22 chr10 54670915 54671188 -90918100 + L1 LINE L1 4670 4936 -1210 1425 198 19 3 chr10 54671182 54671495 -90917793 - L1M2 LINE L1 -898 5248 4931 * 383 188 9 36 chr10 54671527 54671639 -90917649 + L1M LINE L1 5258 5366 -937 250 356 128 61 chr10 54672279 54672686 -90916602 + L2 LINE L2 2824 3257 -15 7103 232 53 16 chr10 54673507 54673685 -90915603 + L1MCa LINE L1 1726 1896 -4530 1806 166 17 3 chr10 54673685 54673974 -90915314 + AluJb SINE Alu 1 293 -19 7103 232 53 16 chr10 54673974 54676638 -90912650 + L1MCa LINE L1 1896 4675 -1751 1674 129 29 53 chr10 54676658 54676999 -90912289 + L1MC2 LINE L1 5997 6329 -15 534 281 0 8 chr10 54677039 54677160 -90912128 - MIR SINE MIR -86 176 57 244 246 0 0 chr10 54677207 54677264 -90912024 + (TA)n Simple_repeat Simple_repeat 1 57 0 218 247 100 140 chr10 54677874 54678024 -90911264 - L2 LINE L2 -8 3264 3121 22 0 0 0 chr10 54678327 54678349 -90910939 + AT_rich Low_complexity Low_complexity 1 22 0 25 0 0 0 chr10 54679452 54679477 -90909811 + AT_rich Low_complexity Low_complexity 1 25 0 267 339 195 9 chr10 54679576 54679797 -90909491 + MIR SINE MIR 1 262 0 4064 192 45 19 chr10 54680324 54680471 -90908817 - L1MB7 LINE L1 0 6184 6042 2168 126 0 3 chr10 54680471 54680772 -90908516 - AluSx SINE Alu -12 300 1 4064 192 45 19 chr10 54680772 54681166 -90908122 - L1MB7 LINE L1 -142 6042 5660 3970 89 2 16 chr10 54681166 54681727 -90907561 - MER41A LTR ERV1 -1 553 1 4064 192 45 19 chr10 54681727 54682133 -90907155 - L1MB7 LINE L1 -524 5660 5212 258 32 0 0 chr10 54682241 54682272 -90907016 + (CA)n Simple_repeat Simple_repeat 2 32 0 1362 146 54 8 chr10 54684341 54684580 -90904708 + L1PA16 LINE L1 5905 6154 -12 2072 139 0 0 chr10 54684583 54684884 -90904404 + AluSx SINE Alu 5 305 -7 23 0 0 0 chr10 54685071 54685094 -90904194 + AT_rich Low_complexity Low_complexity 1 23 0 605 332 244 4 chr10 54685327 54685904 -90903384 + L2 LINE L2 2592 3312 -1 1010 298 29 3 chr10 54686868 54687177 -90902111 + L2 LINE L2 882 1198 -2116 1802 164 17 101 chr10 54687187 54687663 -90901625 + MER67D LTR ERV1 1 436 -78 251 264 0 0 chr10 54687669 54687722 -90901566 + L2 LINE L2 1218 1270 -2044 436 244 42 0 chr10 54687722 54687841 -90901447 + L2 LINE L2 1386 1509 -1805 207 0 0 0 chr10 54688172 54688195 -90901093 + (TTCA)n Simple_repeat Simple_repeat 2 24 0 856 281 91 104 chr10 54688583 54688778 -90900510 + L2 LINE L2 2353 2549 -765 2266 95 0 7 chr10 54688778 54689073 -90900215 + AluSg SINE Alu 1 293 -17 856 281 91 104 chr10 54689073 54689424 -90899864 + L2 LINE L2 2549 2892 -422 283 146 0 18 chr10 54689439 54689494 -90899794 + LTR48 LTR ERV1 694 747 -40 187 258 182 0 chr10 54690541 54690607 -90898681 + MIR SINE MIR 20 97 -165 5299 120 29 55 chr10 54690607 54691529 -90897759 + MER4D LTR ERV1 1 898 -5 294 284 9 46 chr10 54691817 54691926 -90897362 + L2 LINE L2 3150 3254 -59 23 33 0 0 chr10 54692175 54692205 -90897083 + AT_rich Low_complexity Low_complexity 1 30 0 23 33 0 0 chr10 54693436 54693466 -90895822 + AT_rich Low_complexity Low_complexity 1 30 0 468 300 67 7 chr10 54693793 54693943 -90895345 - MIR SINE MIR -18 244 86 262 260 73 0 chr10 54694305 54694401 -90894887 - L1MC4 LINE L1 -131 7911 7809 183 235 0 0 chr10 54695132 54695183 -90894105 + GA-rich Low_complexity Low_complexity 4 54 0 1239 131 49 22 chr10 54696103 54696370 -90892918 - L1MA9 LINE L1 -7 6305 6032 4140 246 18 23 chr10 54696788 54698185 -90891103 - L1PA15-16 LINE L1 -3724 3125 1736 185 369 24 0 chr10 54699589 54699673 -90889615 - L2 LINE L2 0 3272 3187 725 280 80 9 chr10 54699877 54700102 -90889186 + MIR SINE MIR 9 249 -13 912 169 6 6 chr10 54700815 54700975 -90888313 + FRAM SINE Alu 5 164 -2 751 152 21 35 chr10 54701282 54701427 -90887861 - FLAM_C SINE Alu 0 143 1 413 70 0 0 chr10 54702044 54702101 -90887187 + L1PA13 LINE L1 1541 1597 -5190 686 271 29 35 chr10 54702269 54702583 -90886705 + L1ME3A LINE L1 5258 5569 -593 1080 214 47 95 chr10 54702601 54702740 -90886548 - L1MC4 LINE L1 -2 8040 7896 312 27 0 0 chr10 54702740 54702777 -90886511 + (CA)n Simple_repeat Simple_repeat 1 37 0 1080 214 47 95 chr10 54702777 54703174 -90886114 - L1MC4 LINE L1 -146 7896 7530 288 277 0 0 chr10 54703210 54703293 -90885995 - L1MC5 LINE L1 -49 7912 7830 26 0 0 0 chr10 54703293 54703319 -90885969 + AT_rich Low_complexity Low_complexity 1 26 0 390 74 12 80 chr10 54703412 54703575 -90885713 + (TA)n Simple_repeat Simple_repeat 2 153 0 1013 291 124 14 chr10 54703579 54704023 -90885265 + L1ME3A LINE L1 5646 6138 -32 22 70 0 0 chr10 54704027 54704070 -90885218 + AT_rich Low_complexity Low_complexity 1 43 0 3037 88 10 2 chr10 54706333 54706751 -90882537 - L1PA13 LINE L1 -23 6140 5720 1789 168 98 2 chr10 54706735 54707134 -90882154 - L1 LINE L1 -1638 4508 4072 * 4256 48 4 0 chr10 54707134 54707659 -90881629 - L1PA5 LINE L1 -2 6152 5626 1985 243 75 67 chr10 54708853 54709737 -90879551 - L1MCb LINE L1 -4868 1177 287 747 211 6 19 chr10 54709740 54709901 -90879387 - L1MCb LINE L1 -6242 322 164 24 0 0 0 chr10 54709902 54709926 -90879362 + AT_rich Low_complexity Low_complexity 1 24 0 228 214 0 0 chr10 54709929 54709971 -90879317 + MIR SINE MIR 199 240 -22 235 277 10 69 chr10 54711001 54711075 -90878213 - MER5A DNA MER1_type -29 160 92 2067 136 38 49 chr10 54711075 54711443 -90877845 + THE1B LTR MaLR 1 364 0 235 277 10 69 chr10 54711443 54711469 -90877819 - MER5A DNA MER1_type -97 92 66 205 250 0 0 chr10 54711523 54711571 -90877717 + (CA)n Simple_repeat Simple_repeat 1 48 0 1530 122 57 4 chr10 54713019 54713248 -90876040 - AluSx SINE Alu -66 246 6 1983 202 104 7 chr10 54713385 54713845 -90875443 - MLT1D LTR MaLR 0 505 1 1734 236 87 23 chr10 54714427 54714588 -90874700 - MER114 LTR ERV 0 648 499 2219 107 14 6 chr10 54714588 54714934 -90874354 - L1PA13 LINE L1 -5 6158 5810 1734 236 87 23 chr10 54714934 54715381 -90873907 - MER114 LTR ERV -149 499 1 6219 42 1 1 chr10 54716313 54717074 -90872214 + L1PA5 LINE L1 5390 6150 -4 278 179 134 0 chr10 54717631 54717698 -90871590 + MER5A DNA MER1_type 37 112 -77 212 216 0 20 chr10 54718009 54718048 -90871240 + (TAA)n Simple_repeat Simple_repeat 3 42 -10 2215 113 7 10 chr10 54718048 54718357 -90870931 + AluSg SINE Alu 3 310 0 212 216 0 20 chr10 54718357 54718368 -90870920 + (TAA)n Simple_repeat Simple_repeat 42 52 0 328 260 99 42 chr10 54718493 54718685 -90870603 - MER112 DNA MER1_type -47 213 11 236 135 27 0 chr10 54719079 54719116 -90870172 + Alu SINE Alu 251 288 -14 29 60 0 0 chr10 54719116 54719166 -90870122 + AT_rich Low_complexity Low_complexity 1 50 0 219 69 0 0 chr10 54720088 54720117 -90869171 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 235 349 12 0 chr10 54720232 54720318 -90868970 - MIR SINE MIR -168 94 8 214 284 0 45 chr10 54720327 54720394 -90868894 - MIR SINE MIR -184 78 15 21 36 0 0 chr10 54720628 54720656 -90868632 + AT_rich Low_complexity Low_complexity 1 28 0 383 165 25 51 chr10 54721138 54721217 -90868071 + Tigger2 DNA MER2_type 1 77 -2641 877 191 39 22 chr10 54721242 54721420 -90867868 - MER8 DNA MER2_type -58 181 1 21 71 0 0 chr10 54722137 54722179 -90867109 + AT_rich Low_complexity Low_complexity 1 42 0 227 333 0 25 chr10 54723232 54723313 -90865975 + L2 LINE L2 2977 3055 -217 428 313 123 6 chr10 54723467 54723646 -90865642 + MIR SINE MIR 37 236 -26 294 274 47 28 chr10 54723648 54723754 -90865534 + MIR3 SINE MIR 97 204 -4 24 32 0 0 chr10 54723888 54723919 -90865369 + AT_rich Low_complexity Low_complexity 1 31 0 1604 197 26 3 chr10 54724996 54725300 -90863988 + AluJo SINE Alu 1 311 -1 192 194 14 28 chr10 54725422 54725494 -90863794 + CT-rich Low_complexity Low_complexity 5 75 0 432 316 14 0 chr10 54726243 54726382 -90862906 - MIR SINE MIR -66 196 56 612 311 80 0 chr10 54727737 54727949 -90861339 - MIR SINE MIR -14 248 20 414 318 84 0 chr10 54728446 54728625 -90860663 + MIR SINE MIR 20 213 -49 4879 168 30 23 chr10 54728638 54728822 -90860466 + L1MA8 LINE L1 5023 5204 -1087 2251 103 0 13 chr10 54728822 54729134 -90860154 + AluSg SINE Alu 1 308 -2 4879 168 30 23 chr10 54729134 54729981 -90859307 + L1MA8 LINE L1 5204 6062 -229 2414 82 0 0 chr10 54729981 54730285 -90859003 + AluSc SINE Alu 1 304 -5 4879 168 30 23 chr10 54730285 54730490 -90858798 + L1MA8 LINE L1 6062 6264 -27 353 215 0 11 chr10 54730503 54730596 -90858692 - L1M4 LINE L1 -1875 4271 4180 205 314 0 0 chr10 54730596 54730647 -90858641 + polypyrimidine Low_complexity Low_complexity 5 55 0 675 295 39 28 chr10 54730647 54731003 -90858285 - L1M4 LINE L1 -1955 4191 3832 331 309 34 13 chr10 54731288 54731437 -90857851 - L1MEd LINE L1 -5965 154 3 21 0 0 0 chr10 54731437 54731458 -90857830 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr10 54731546 54731583 -90857705 + AT_rich Low_complexity Low_complexity 1 37 0 23 33 0 0 chr10 54732572 54732602 -90856686 + AT_rich Low_complexity Low_complexity 1 30 0 1255 157 30 17 chr10 54733814 54734044 -90855244 - L1MA7 LINE L1 -254 6037 5805 24 0 0 0 chr10 54734196 54734220 -90855068 + AT_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr10 54734796 54734825 -90854463 + AT_rich Low_complexity Low_complexity 1 29 0 222 350 189 20 chr10 54735436 54735996 -90853292 - L2 LINE L2 -834 2480 1826 501 290 90 35 chr10 54736884 54737084 -90852204 + MLT1I LTR MaLR 199 409 0 260 218 115 13 chr10 54737792 54737870 -90851418 - MIR SINE MIR -65 197 112 229 173 182 73 chr10 54738246 54738356 -90850932 + Charlie8 DNA MER1_type 117 238 -2179 269 331 83 0 chr10 54739063 54739184 -90850104 + MIR SINE MIR 132 262 0 302 243 0 27 chr10 54739988 54740062 -90849226 + MIR3 SINE MIR 124 195 -13 647 235 0 8 chr10 54740073 54740205 -90849083 - FLAM_C SINE Alu -2 131 1 2034 130 26 13 chr10 54740746 54741054 -90848234 + AluSx SINE Alu 1 312 0 1598 160 35 9 chr10 54741123 54741441 -90847847 - L1MB3 LINE L1 -10 6173 5848 265 104 55 43 chr10 54741441 54741511 -90847777 + L1MB3 LINE L1 5808 5874 -309 2197 128 0 0 chr10 54741886 54742190 -90847098 + AluSx SINE Alu 1 304 -8 417 189 18 9 chr10 54742896 54743007 -90846281 + GA-rich Low_complexity Low_complexity 1 112 0 25 65 0 0 chr10 54743561 54743607 -90845681 + AT_rich Low_complexity Low_complexity 1 46 0 338 182 0 91 chr10 54745029 54745117 -90844171 + L1MC5 LINE L1 7832 7911 -50 347 183 19 67 chr10 54746275 54746379 -90842909 - L2 LINE L2 -3 3310 3212 211 291 93 23 chr10 54746996 54747082 -90842206 - L2 LINE L2 0 3272 3181 443 319 44 25 chr10 54747106 54747266 -90842022 - MIR3 SINE MIR -28 180 18 595 258 58 104 chr10 54747335 54747595 -90841693 - MIR SINE MIR 0 262 15 337 273 53 45 chr10 54747600 54747732 -90841556 - MER5A DNA MER1_type -1 188 56 1423 211 42 0 chr10 54747817 54748125 -90841163 - MER58B DNA MER1_type -1 340 20 21 0 0 0 chr10 54748396 54748417 -90840871 + AT_rich Low_complexity Low_complexity 1 21 0 1070 221 139 37 chr10 54748695 54749235 -90840053 + LTR27 LTR ERV1 3 661 -142 908 222 13 39 chr10 54749213 54749514 -90839774 + LTR28 LTR ERV1 686 1020 0 * 191 242 343 10 chr10 54749910 54750009 -90839279 - L3 LINE CR1 -115 1462 1331 743 171 0 0 chr10 54750468 54750618 -90838670 - FLAM_C SINE Alu 0 150 1 372 59 0 0 chr10 54751385 54751436 -90837852 + (CA)n Simple_repeat Simple_repeat 2 52 0 307 261 26 43 chr10 54751876 54751991 -90837297 + L1 LINE L1 4365 4477 -1669 184 312 112 8 chr10 54752052 54752177 -90837111 + L2 LINE L2 566 703 -2611 42591 39 0 2 chr10 54752391 54758360 -90830928 + L1PA3 LINE L1 197 6152 -3 289 219 41 0 chr10 54758674 54758747 -90830541 + HsTC2 DNA Tc2 5 80 -1818 25 31 0 0 chr10 54760205 54760237 -90829051 + AT_rich Low_complexity Low_complexity 1 32 0 21 82 0 0 chr10 54760877 54760926 -90828362 + AT_rich Low_complexity Low_complexity 1 49 0 500 306 6 45 chr10 54760937 54761094 -90828194 - MIR SINE MIR -81 181 31 3644 155 95 12 chr10 54761386 54762037 -90827251 - MER44D DNA MER2_type 0 705 1 2565 166 9 49 chr10 54762330 54762901 -90826387 + L1 LINE L1 4615 5162 -984 284 348 46 61 chr10 54763212 54763623 -90825665 + L2 LINE L2 2568 2972 -342 358 256 67 89 chr10 54763708 54764224 -90825064 + L1ME LINE L1 5033 5543 -627 226 129 94 106 chr10 54765083 54765168 -90824120 - MIR SINE MIR -67 141 58 23 0 0 0 chr10 54765602 54765625 -90823663 + AT_rich Low_complexity Low_complexity 1 23 0 2136 198 24 5 chr10 54766473 54766883 -90822405 + MER47B DNA MER2_type 1 418 0 244 65 0 0 chr10 54766885 54766916 -90822372 + MLT1A1 LTR MaLR 335 365 0 18280 184 32 23 chr10 54768778 54769887 -90819401 + L1PA13 LINE L1 123 1220 -5594 216 0 0 0 chr10 54769887 54769911 -90819377 + (CTG)n Simple_repeat Simple_repeat 1 24 0 18280 184 32 23 chr10 54769911 54771080 -90818208 + L1PA13 LINE L1 1220 2376 -4438 1961 148 3 13 chr10 54771080 54771402 -90817886 - AluSx SINE Alu 0 312 1 18280 184 32 23 chr10 54771402 54775741 -90813547 + L1PA13 LINE L1 2376 6813 -1 4302 185 47 8 chr10 54775927 54777023 -90812265 - L1MB7 LINE L1 -15 6169 5021 315 293 122 44 chr10 54777434 54777639 -90811649 + MIR SINE MIR 29 249 -13 498 301 37 64 chr10 54778405 54778554 -90810734 + MLT1L LTR MaLR 4 143 -472 1340 256 37 0 chr10 54778554 54778882 -90810406 - MER58B DNA MER1_type 0 341 2 498 301 37 64 chr10 54778882 54779028 -90810260 + MLT1L LTR MaLR 143 291 -324 213 378 54 39 chr10 54880406 54880610 -90708678 - L2 LINE L2 -1049 2265 2059 192 135 0 0 chr10 54880720 54880757 -90708531 + (ATG)n Simple_repeat Simple_repeat 2 38 0 228 348 81 45 chr10 54882552 54882997 -90706291 + L2 LINE L2 2511 2971 -343 474 224 0 56 chr10 54883099 54883242 -90706046 + FLAM_A SINE Alu 8 142 0 3167 143 40 12 chr10 54883578 54884266 -90705022 + Tigger7 DNA MER2_type 7 2486 -1 5506 129 42 13 chr10 54884437 54885558 -90703730 + Tigger3b DNA MER2_type 2 1207 -24 607 268 103 13 chr10 54886131 54886355 -90702933 - L1MC5 LINE L1 -1085 6876 6633 33 0 0 0 chr10 54886363 54886396 -90702892 + AT_rich Low_complexity Low_complexity 1 33 0 26 50 0 0 chr10 54886679 54886719 -90702569 + AT_rich Low_complexity Low_complexity 1 40 0 2301 105 0 10 chr10 54887219 54887533 -90701755 + AluSq SINE Alu 1 311 -2 336 154 77 55 chr10 54888050 54888141 -90701147 - HAL1b LINE L1 -22 1326 1234 37 39 0 0 chr10 54889706 54889757 -90699531 + AT_rich Low_complexity Low_complexity 1 51 0 286 138 14 0 chr10 54889971 54890040 -90699248 - Alu SINE Alu -1 307 261 4955 128 41 30 chr10 54890150 54890513 -90698775 + Tigger2 DNA MER2_type 1857 2215 -503 2076 130 23 52 chr10 54890513 54890858 -90698430 + MER1B DNA MER1_type 3 337 0 4955 128 41 30 chr10 54890858 54891347 -90697941 + Tigger2 DNA MER2_type 2215 2718 0 22 0 0 0 chr10 54891368 54891390 -90697898 + AT_rich Low_complexity Low_complexity 1 22 0 216 24 48 24 chr10 54891617 54891659 -90697629 + (TA)n Simple_repeat Simple_repeat 2 44 0 23 33 0 0 chr10 54891681 54891711 -90697577 + AT_rich Low_complexity Low_complexity 1 30 0 1120 97 30 0 chr10 54893243 54893408 -90695880 - L1PA13 LINE L1 -2 6161 5992 1569 74 5 5 chr10 54893441 54893658 -90695630 - L1PB2 LINE L1 0 6151 5935 334 300 67 0 chr10 54894145 54894265 -90695023 - MIR3 SINE MIR -67 141 14 2845 10 3 0 chr10 54894984 54895298 -90693990 + AluYb8 SINE Alu 1 315 -3 189 94 0 0 chr10 54895927 54895959 -90693329 + (A)n Simple_repeat Simple_repeat 1 32 0 221 254 201 37 chr10 54897377 54897511 -90691777 + L2 LINE L2 1849 2004 -1310 1947 146 36 12 chr10 54897534 54897869 -90691419 + MLT1A1 LTR MaLR 23 365 0 697 347 146 37 chr10 54897897 54898739 -90690549 + L2 LINE L2 2040 2973 -341 366 264 173 0 chr10 54898903 54899013 -90690275 + L2 LINE L2 3184 3312 -1 2120 171 78 8 chr10 54899634 54900032 -90689256 + MSTB LTR MaLR 1 426 0 270 0 0 0 chr10 54900169 54900199 -90689089 + (TG)n Simple_repeat Simple_repeat 1 30 0 355 303 0 0 chr10 54900199 54900288 -90689000 + L1MC4 LINE L1 6615 6703 -1339 305 180 50 50 chr10 54900227 54900327 -90688961 - L1MCa LINE L1 -4362 2064 1965 * 21 57 0 0 chr10 54900389 54900424 -90688864 + AT_rich Low_complexity Low_complexity 1 35 0 1583 17 0 0 chr10 54900484 54900657 -90688631 + AluYa5 SINE Alu 130 302 -9 199 346 79 47 chr10 54900745 54900872 -90688416 + L2 LINE L2 3142 3272 0 234 91 0 0 chr10 54901931 54901964 -90687324 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 1032 124 40 35 chr10 54902137 54902338 -90686950 + L1MA9 LINE L1 6106 6307 -5 21 0 0 0 chr10 54902492 54902513 -90686775 + AT_rich Low_complexity Low_complexity 1 21 0 703 127 9 0 chr10 54902695 54902844 -90686444 - AluSp/q SINE Alu 0 324 175 194 152 0 43 chr10 54902996 54903042 -90686246 + CT-rich Low_complexity Low_complexity 4 47 0 482 279 29 23 chr10 54903279 54903451 -90685837 - MER5B DNA MER1_type -4 174 2 1086 136 0 38 chr10 54903598 54903782 -90685506 + AluSg/x SINE Alu 132 308 -2 241 186 0 17 chr10 54905113 54905172 -90684116 + A-rich Low_complexity Low_complexity 2 59 0 218 189 0 0 chr10 54906129 54906166 -90683122 + (CATATA)n Simple_repeat Simple_repeat 3 39 0 221 81 0 27 chr10 54907536 54907573 -90681715 + (TA)n Simple_repeat Simple_repeat 1 36 0 24 32 0 0 chr10 54908398 54908429 -90680859 + AT_rich Low_complexity Low_complexity 1 31 0 222 364 121 14 chr10 54909499 54909639 -90679649 - L2 LINE L2 -36 3236 3082 27 29 0 0 chr10 54909770 54909804 -90679484 + AT_rich Low_complexity Low_complexity 1 34 0 194 354 75 20 chr10 54909832 54909979 -90679309 - MIR SINE MIR -46 216 62 698 266 120 33 chr10 54910301 54910542 -90678746 + MIR SINE MIR 1 262 0 181 360 75 20 chr10 54912350 54912497 -90676791 - MIR SINE MIR -46 216 62 1386 163 20 59 chr10 54913652 54913958 -90675330 + AluJo SINE Alu 1 294 -18 390 203 134 58 chr10 54913991 54914252 -90675036 + L1MC5 LINE L1 7497 7777 -184 548 252 145 37 chr10 54914440 54914654 -90674634 + MIR SINE MIR 26 262 0 1958 164 30 9 chr10 54915417 54915747 -90673541 - MER1B DNA MER1_type 0 337 1 808 183 6 44 chr10 54916597 54916777 -90672511 + FRAM SINE Alu 1 167 -9 978 145 0 0 chr10 54916777 54916943 -90672345 + (TA)n Simple_repeat Simple_repeat 2 167 0 341 282 0 0 chr10 54917020 54917098 -90672190 + MER112 DNA MER1_type 177 254 -6 21 0 0 0 chr10 54918096 54918117 -90671171 + AT_rich Low_complexity Low_complexity 1 21 0 738 245 10 56 chr10 54918359 54918555 -90670733 + MER20 DNA MER1_type 1 187 -32 1906 147 24 163 chr10 54918555 54919052 -90670236 + MSTB LTR MaLR 1 426 0 275 258 0 0 chr10 54919052 54919118 -90670170 + MSTB-int LTR MaLR 1 66 -1585 * 5393 196 18 9 chr10 54919098 54920108 -90669180 + MSTB-int LTR MaLR 633 1651 0 2364 186 17 0 chr10 54920108 54920527 -90668761 + MSTB LTR MaLR 1 426 0 21 0 0 0 chr10 54920666 54920687 -90668601 + AT_rich Low_complexity Low_complexity 1 21 0 411 176 0 0 chr10 54920817 54920891 -90668397 - MER116 DNA Mariner -1 79 6 4576 208 21 12 chr10 54920999 54921898 -90667390 + L1M2c LINE L1 67 973 -5816 1888 222 8 6 chr10 54921900 54922251 -90667037 + MSTB LTR MaLR 2 353 -73 7935 16 0 0 chr10 54922251 54923690 -90665598 + L1HS LINE L1 4717 6155 0 568 121 0 0 chr10 54923706 54923789 -90665499 + MSTB LTR MaLR 346 428 -4 13682 205 29 31 chr10 54923850 54925137 -90664151 + L1MA5A LINE L1 810 2099 -4840 1979 132 4 4 chr10 54925137 54925447 -90663841 + AluSg SINE Alu 1 310 0 13682 205 29 31 chr10 54925447 54930260 -90659028 + L1MA5A LINE L1 2099 6938 -1 26 0 0 0 chr10 54930995 54931021 -90658267 + AT_rich Low_complexity Low_complexity 1 26 0 659 227 0 0 chr10 54932206 54932338 -90656950 + Tigger7 DNA MER2_type 147 278 -272 357 208 39 0 chr10 54933262 54933339 -90655949 - MER116 DNA Mariner 0 80 1 1822 209 7 44 chr10 54933946 54934357 -90654931 + MSTD LTR MaLR 1 396 0 6849 221 60 39 chr10 54934358 54936047 -90653241 + MSTD-int LTR MaLR 1 1724 -11 1280 153 4 60 chr10 54936061 54936310 -90652978 + MSTD LTR MaLR 5 239 -157 657 148 0 0 chr10 54936310 54936452 -90652836 + (TC)n Simple_repeat Simple_repeat 1 142 0 * 857 182 28 79 chr10 54936427 54936641 -90652647 + MSTD LTR MaLR 194 396 0 186 250 116 62 chr10 54936978 54937090 -90652198 + MIR SINE MIR 68 185 -77 23 33 0 0 chr10 54937869 54937899 -90651389 + AT_rich Low_complexity Low_complexity 1 30 0 331 244 9 17 chr10 54938061 54938176 -90651112 + L1MC4a LINE L1 5309 5422 -2386 293 291 98 22 chr10 54938257 54938532 -90650756 + L1MC4a LINE L1 5633 5928 -1880 33 90 0 0 chr10 54938656 54938745 -90650543 + AT_rich Low_complexity Low_complexity 1 89 0 339 25 0 0 chr10 54939146 54939186 -90650102 + (CA)n Simple_repeat Simple_repeat 1 40 0 434 291 30 60 chr10 54939373 54939641 -90649647 + MIR SINE MIR 3 262 0 581 162 95 34 chr10 54939966 54940114 -90649174 + MER53 DNA DNA 1 157 -32 * 1139 185 93 103 chr10 54940105 54940472 -90648816 + MER57A LTR ERV1 41 403 0 319 140 0 0 chr10 54940472 54940520 -90648768 + MER53 DNA DNA 142 189 0 259 303 74 137 chr10 54940523 54940969 -90648319 - L2 LINE L2 -12 3260 2843 633 259 60 30 chr10 54941794 54941995 -90647293 + MER58C DNA MER1_type 7 213 -2 369 308 50 8 chr10 54941996 54942116 -90647172 - MIR SINE MIR -126 136 12 351 65 0 0 chr10 54942946 54942992 -90646296 + (TCCA)n Simple_repeat Simple_repeat 4 49 0 725 294 13 17 chr10 54943168 54943399 -90645889 - MIR SINE MIR 0 262 33 208 220 0 20 chr10 54943993 54944043 -90645245 - MIR SINE MIR -114 148 100 296 260 13 0 chr10 54945015 54945092 -90644196 - MIR SINE MIR -1 261 184 236 313 56 49 chr10 54945245 54945389 -90643899 + MIR SINE MIR 97 241 -21 2205 55 55 10 chr10 54945998 54946289 -90642999 - AluY SINE Alu -7 304 1 2076 101 17 3 chr10 54946581 54946868 -90642420 - AluSx SINE Alu -21 291 1 2281 97 0 3 chr10 54947227 54947527 -90641761 + AluSg SINE Alu 1 299 -11 187 331 65 32 chr10 54948152 54948276 -90641012 + MIR SINE MIR 19 146 -62 22 0 0 0 chr10 54948276 54948298 -90640990 + AT_rich Low_complexity Low_complexity 1 22 0 33 25 0 0 chr10 54948930 54948970 -90640318 + AT_rich Low_complexity Low_complexity 1 40 0 631 104 0 0 chr10 54949587 54949726 -90639562 - AluY SINE Alu 0 311 205 968 89 0 27 chr10 54950106 54950252 -90639036 - AluSq SINE Alu -158 155 14 330 244 23 76 chr10 54950327 54950458 -90638830 - MIR SINE MIR -119 143 20 190 183 56 8 chr10 54950935 54951061 -90638227 + (TA)n Simple_repeat Simple_repeat 1 132 0 237 33 0 0 chr10 54951087 54951117 -90638171 + (CA)n Simple_repeat Simple_repeat 2 31 0 21 0 0 0 chr10 54951793 54951814 -90637474 + AT_rich Low_complexity Low_complexity 1 21 0 203 327 20 113 chr10 54952587 54952737 -90636551 + L2 LINE L2 3132 3267 -5 309 274 65 52 chr10 54952811 54952964 -90636324 - MIR SINE MIR -7 255 101 253 156 0 22 chr10 54953366 54953411 -90635877 - MIR SINE MIR -27 235 192 23 33 0 0 chr10 54955099 54955129 -90634159 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr10 54955480 54955508 -90633780 + AT_rich Low_complexity Low_complexity 1 28 0 215 98 66 33 chr10 54956501 54956562 -90632726 + GA-rich Low_complexity Low_complexity 1 63 0 357 24 0 0 chr10 54956983 54957025 -90632263 + (TA)n Simple_repeat Simple_repeat 2 43 0 243 232 37 12 chr10 54957041 54957123 -90632165 - L1MC4 LINE L1 -1338 6704 6621 27 0 0 0 chr10 54957470 54957497 -90631791 + AT_rich Low_complexity Low_complexity 1 27 0 342 123 0 0 chr10 54957781 54957838 -90631450 + (TCCA)n Simple_repeat Simple_repeat 1 57 0 216 0 0 0 chr10 54958575 54958599 -90630689 + (TG)n Simple_repeat Simple_repeat 2 25 0 4280 94 14 24 chr10 54959022 54959680 -90629608 + L1PB2 LINE L1 5499 6149 -2 336 174 337 0 chr10 54959866 54959958 -90629330 + MER5C DNA MER1_type 2 124 -200 2176 95 3 0 chr10 54960286 54960607 -90628681 + AluSp SINE Alu 1 322 0 636 211 84 0 chr10 54961039 54961229 -90628059 + MER5C DNA MER1_type 119 324 0 420 271 179 29 chr10 54961421 54961694 -90627594 + L2 LINE L2 2443 2756 -558 673 309 133 33 chr10 54961731 54962093 -90627195 + L2 LINE L2 2916 3313 0 911 180 5 16 chr10 54963051 54963245 -90626043 + L1PA14 LINE L1 5961 6152 -9 531 308 8 0 chr10 54963888 54964018 -90625270 - MIR SINE MIR -116 146 16 2002 126 0 3 chr10 54964146 54964467 -90624821 - AluSx SINE Alu 0 320 1 1523 165 54 57 chr10 54964557 54964945 -90624343 - MLT1B LTR MaLR -3 387 1 234 0 0 0 chr10 54965347 54965373 -90623915 + (A)n Simple_repeat Simple_repeat 1 26 0 255 250 42 0 chr10 54965875 54965947 -90623341 - MIR SINE MIR -56 206 132 1015 156 44 6 chr10 54965957 54966137 -90623151 - MER20 DNA MER1_type 0 219 33 264 247 62 25 chr10 54966157 54966238 -90623050 - MIR SINE MIR -142 120 37 306 370 148 7 chr10 54966295 54966728 -90622560 + L2 LINE L2 2190 2683 -631 240 304 200 9 chr10 54967421 54967536 -90621752 + L1ME4a LINE L1 5495 5631 -2177 203 335 103 19 chr10 54967722 54967877 -90621411 + MIR SINE MIR 26 193 -69 253 257 219 9 chr10 54968019 54968124 -90621164 + L1ME4a LINE L1 5986 6112 -9 25 0 0 0 chr10 54969147 54969172 -90620116 + AT_rich Low_complexity Low_complexity 1 25 0 2109 118 3 19 chr10 54969490 54969805 -90619483 - AluSx SINE Alu -2 310 1 446 262 196 34 chr10 54970484 54970875 -90618413 + LTR41 LTR ERVL 11 581 -192 * 915 170 22 67 chr10 54970840 54971063 -90618225 + MER20 DNA MER1_type 7 219 0 511 199 53 121 chr10 54971127 54971333 -90617955 + LTR41 LTR ERVL 576 767 -6 183 80 0 0 chr10 54971343 54971368 -90617920 + (TTCA)n Simple_repeat Simple_repeat 3 27 0 337 309 43 11 chr10 54971376 54971470 -90617818 - L2 LINE L2 -22 3250 3154 284 338 97 14 chr10 54972077 54972222 -90617066 + MIR3 SINE MIR 20 176 -32 356 284 32 0 chr10 54972408 54972503 -90616785 + MER58B DNA MER1_type 244 341 0 1554 223 12 3 chr10 54974145 54974482 -90614806 + MER58B DNA MER1_type 1 340 -1 184 189 27 0 chr10 54975134 54975171 -90614117 + L2 LINE L2 3186 3223 -49 1787 181 20 15 chr10 54976502 54976844 -90612444 - MER2 DNA MER2_type 0 344 1 22 35 0 0 chr10 54976910 54976939 -90612349 + AT_rich Low_complexity Low_complexity 1 29 0 431 317 81 16 chr10 54977581 54977767 -90611521 - MIR SINE MIR -11 251 54 218 302 58 12 chr10 54979286 54979372 -90609916 + L2 LINE L2 3181 3270 -2 557 266 68 16 chr10 54980073 54980265 -90609023 - MIR SINE MIR 0 262 61 1568 108 39 4 chr10 54981256 54981515 -90607773 + L1MA1 LINE L1 6030 6297 -5 27 29 0 0 chr10 54981539 54981573 -90607715 + AT_rich Low_complexity Low_complexity 1 34 0 22 80 0 0 chr10 54981605 54981655 -90607633 + AT_rich Low_complexity Low_complexity 1 50 0 232 203 76 13 chr10 54981806 54981885 -90607403 - L1 LINE L1 -1316 4830 4747 413 338 79 40 chr10 54981961 54982417 -90606871 - L1 LINE L1 -1426 4720 4247 245 303 104 76 chr10 54982417 54982483 -90606805 + L2 LINE L2 2820 2883 -430 1949 89 110 0 chr10 54982483 54982764 -90606524 - AluSq SINE Alu -1 312 1 245 303 104 76 chr10 54982764 54983129 -90606159 + L2 LINE L2 2883 3263 -50 372 171 163 31 chr10 54983274 54983403 -90605885 + MIR SINE MIR 117 262 0 339 299 229 25 chr10 54984195 54984396 -90604892 - MIR SINE MIR -1 261 20 1021 111 12 17 chr10 54984973 54985145 -90604143 - AluYa5 SINE Alu -8 303 133 22 0 10 0 chr10 54985571 54985636 -90603652 + AT_rich Low_complexity Low_complexity 1 22 0 231 222 0 0 chr10 54986520 54986565 -90602723 - MIR3 SINE MIR -41 167 123 779 274 25 8 chr10 54987369 54987610 -90601678 - MLT1D LTR MaLR 0 505 261 267 79 0 0 chr10 54987636 54987674 -90601614 + (TG)n Simple_repeat Simple_repeat 2 39 0 357 153 85 0 chr10 54987726 54987785 -90601503 - MLT1D LTR MaLR -441 64 1 326 183 115 67 chr10 54988766 54988870 -90600418 - MIR SINE MIR -17 245 137 16066 211 25 17 chr10 54988886 54992904 -90596384 - L1PA15 LINE L1 0 6816 2834 1900 123 54 0 chr10 54992904 54993216 -90596072 - AluSx SINE Alu 0 327 1 16066 211 25 17 chr10 54993216 54993264 -90596024 - L1PA15 LINE L1 -3982 2834 2788 4443 163 67 62 chr10 54993264 54994329 -90594959 + MER11C LTR ERVK 2 1071 0 16066 211 25 17 chr10 54994329 54996798 -90592490 - L1PA15 LINE L1 -4028 2788 1 458 233 50 101 chr10 54996820 54996979 -90592309 - MIR SINE MIR -111 151 1 23 0 0 0 chr10 54997630 54997653 -90591635 + AT_rich Low_complexity Low_complexity 1 23 0 1177 236 66 27 chr10 54997974 54998275 -90591013 - MER58B DNA MER1_type -2 339 27 216 285 256 22 chr10 54998473 54998789 -90590499 + L2 LINE L2 2331 2720 -594 304 322 77 0 chr10 54998793 54998936 -90590352 + MIR SINE MIR 71 224 -38 331 297 103 32 chr10 54999220 54999405 -90589883 + L2 LINE L2 3014 3211 -102 198 291 127 0 chr10 54999834 54999889 -90589399 - L2 LINE L2 -2 3270 3209 186 43 0 0 chr10 55000531 55000554 -90588734 + (A)n Simple_repeat Simple_repeat 1 23 0 181 288 136 0 chr10 55000636 55000702 -90588586 + MIR SINE MIR 67 141 -67 2184 165 23 2 chr10 55000848 55001243 -90588045 - MER57A LTR ERV1 0 403 1 204 67 0 0 chr10 55001997 55002027 -90587261 + (TAAAAA)n Simple_repeat Simple_repeat 6 35 0 298 296 67 7 chr10 55003281 55003416 -90585872 + MIR SINE MIR 120 262 0 23 78 0 0 chr10 55003833 55003884 -90585404 + AT_rich Low_complexity Low_complexity 1 51 0 2276 107 3 0 chr10 55003943 55004242 -90585046 + AluSq SINE Alu 1 300 -13 22 35 0 0 chr10 55004536 55004565 -90584723 + AT_rich Low_complexity Low_complexity 1 29 0 273 258 0 0 chr10 55006138 55006231 -90583057 + (TA)n Simple_repeat Simple_repeat 2 94 0 2292 103 3 0 chr10 55006762 55007063 -90582225 + AluSg SINE Alu 1 302 -8 876 283 48 15 chr10 55008973 55009245 -90580043 + MLT1F LTR MaLR 108 388 -154 5342 91 30 4 chr10 55009264 55010023 -90579265 - L1PA13 LINE L1 -22 6141 5363 590 224 8 22 chr10 55010044 55010178 -90579110 + MLT1F LTR MaLR 436 567 0 558 282 143 0 chr10 55011403 55011612 -90577676 + MIR SINE MIR 11 249 -13 3267 309 97 13 chr10 55011831 55013270 -90576018 + L2 LINE L2 1548 3123 -190 5714 148 13 11 chr10 55013283 55013641 -90575647 - L1PB1 LINE L1 -2 6149 5793 348 83 0 0 chr10 55013641 55013689 -90575599 + (TA)n Simple_repeat Simple_repeat 2 49 0 5714 148 13 11 chr10 55013689 55014749 -90574539 - L1PB1 LINE L1 -358 5793 4726 592 150 100 89 chr10 55014756 55014936 -90574352 + L2 LINE L2 3095 3276 -37 1955 144 38 26 chr10 55016150 55016489 -90572799 - MER2 DNA MER2_type -1 343 1 504 293 83 35 chr10 55019202 55019431 -90569857 - MIR SINE MIR 0 262 23 1888 174 0 10 chr10 55019950 55020255 -90569033 + AluJb SINE Alu 1 302 -10 267 31 0 0 chr10 55020255 55020287 -90569001 + (GA)n Simple_repeat Simple_repeat 1 32 0 1978 113 0 0 chr10 55020888 55021163 -90568125 + AluSx SINE Alu 35 309 -3 42865 31 21 1 chr10 55022162 55028069 -90561219 + L1PA2 LINE L1 29 6056 -99 482 279 29 23 chr10 55028381 55028553 -90560735 - MER5B DNA MER1_type -4 174 2 1060 141 0 38 chr10 55028700 55028885 -90560403 + AluSg/x SINE Alu 132 309 -1 241 186 0 17 chr10 55030215 55030274 -90559014 + A-rich Low_complexity Low_complexity 2 59 0 218 189 0 0 chr10 55031231 55031268 -90558020 + (CATATA)n Simple_repeat Simple_repeat 3 39 0 242 54 0 27 chr10 55032643 55032680 -90556608 + (TA)n Simple_repeat Simple_repeat 1 36 0 24 32 0 0 chr10 55033506 55033537 -90555751 + AT_rich Low_complexity Low_complexity 1 31 0 222 364 121 14 chr10 55034607 55034747 -90554541 - L2 LINE L2 -36 3236 3082 27 29 0 0 chr10 55034878 55034912 -90554376 + AT_rich Low_complexity Low_complexity 1 34 0 181 360 75 20 chr10 55034940 55035087 -90554201 - MIR SINE MIR -46 216 62 242 98 24 0 chr10 55036520 55036561 -90552727 - L1MEc LINE L1 -4734 1662 1621 352 103 0 17 chr10 55036689 55036747 -90552541 - L1PB3 LINE L1 -7 6147 6091 23 33 0 0 chr10 55037494 55037524 -90551764 + AT_rich Low_complexity Low_complexity 1 30 0 210 37 0 0 chr10 55037982 55038009 -90551279 + (TG)n Simple_repeat Simple_repeat 2 28 0 2200 133 3 0 chr10 55038778 55039086 -90550202 - AluSx SINE Alu -1 311 3 1819 153 23 65 chr10 55039190 55039542 -90549746 + MER2 DNA MER2_type 9 345 0 684 224 121 39 chr10 55039905 55040096 -90549192 - L1MB7 LINE L1 0 6184 5969 1805 151 24 3 chr10 55040096 55040388 -90548900 - AluJb SINE Alu -14 298 1 684 224 121 39 chr10 55040388 55040428 -90548860 - L1MB7 LINE L1 -215 5969 5934 288 304 130 56 chr10 55041586 55041747 -90547541 - MIR3 SINE MIR -1 207 35 735 154 40 7 chr10 55042556 55042705 -90546583 - L1MC3 LINE L1 -9 7776 7623 234 0 0 0 chr10 55042706 55042732 -90546556 + (TTA)n Simple_repeat Simple_repeat 2 27 0 2516 80 14 16 chr10 55042735 55043099 -90546189 - L1PA10 LINE L1 -8 6160 5798 312 203 0 0 chr10 55043228 55043287 -90546001 - MIR SINE MIR -114 148 90 297 0 0 0 chr10 55043561 55043594 -90545694 + (CAT)n Simple_repeat Simple_repeat 2 34 0 22 0 0 0 chr10 55043694 55043716 -90545572 + AT_rich Low_complexity Low_complexity 1 22 0 499 263 59 90 chr10 55043988 55044445 -90544843 - L1ME4a LINE L1 -3 6118 5676 296 301 11 0 chr10 55045217 55045310 -90543978 + MIR SINE MIR 47 140 -122 222 253 133 96 chr10 55045393 55045559 -90543729 - MIR SINE MIR -71 191 20 5684 29 0 0 chr10 55046735 55047400 -90541888 + L1PA4 LINE L1 5488 6152 -3 21 36 0 0 chr10 55049327 55049355 -90539933 + AT_rich Low_complexity Low_complexity 1 28 0 373 281 34 0 chr10 55050341 55050430 -90538858 - L2 LINE L2 -34 3279 3188 2276 136 5 5 chr10 55050647 55051015 -90538273 - L1PB1 LINE L1 0 6151 5784 203 157 0 57 chr10 55051016 55051086 -90538202 + (TA)n Simple_repeat Simple_repeat 2 67 0 2770 99 63 2 chr10 55051092 55051517 -90537771 - L1PB1 LINE L1 -361 5790 5340 263 151 19 19 chr10 55051756 55051809 -90537479 + L1M4 LINE L1 4702 4754 -1392 449 112 20 31 chr10 55052092 55052190 -90537098 + GA-rich Low_complexity Low_complexity 1 97 0 3526 117 4 4 chr10 55052761 55053272 -90536016 + MER9 LTR ERVK 1 511 0 30 27 0 0 chr10 55053863 55053900 -90535388 + AT_rich Low_complexity Low_complexity 1 37 0 2398 88 3 0 chr10 55054162 55054469 -90534819 - AluSp SINE Alu -5 308 1 465 19 0 0 chr10 55055256 55055310 -90533978 + (TAAA)n Simple_repeat Simple_repeat 3 56 0 201 189 44 11 chr10 55056056 55056146 -90533142 + (TA)n Simple_repeat Simple_repeat 2 94 0 47 33 0 0 chr10 55056146 55056207 -90533081 + AT_rich Low_complexity Low_complexity 1 61 0 243 216 0 0 chr10 55056207 55056323 -90532965 + (TA)n Simple_repeat Simple_repeat 2 117 0 62 14 0 0 chr10 55056328 55056397 -90532891 + AT_rich Low_complexity Low_complexity 1 69 0 251 292 39 77 chr10 55057537 55057667 -90531621 - MIR3 SINE MIR -2 206 82 254 140 0 20 chr10 55058096 55058146 -90531142 + (TTC)n Simple_repeat Simple_repeat 3 51 0 2032 137 3 0 chr10 55058148 55058441 -90530847 - AluSx SINE Alu -18 294 1 236 208 26 52 chr10 55059627 55059704 -90529584 + MIR3 SINE MIR 128 202 -6 1204 192 174 21 chr10 55060563 55060891 -90528397 - L1MC3 LINE L1 -172 7613 7236 231 36 0 0 chr10 55061507 55061535 -90527753 + (T)n Simple_repeat Simple_repeat 1 28 0 207 0 0 0 chr10 55061547 55061570 -90527718 + (TTTTTA)n Simple_repeat Simple_repeat 2 24 0 24 0 0 0 chr10 55061699 55061723 -90527565 + AT_rich Low_complexity Low_complexity 1 24 0 43725 39 3 1 chr10 55061723 55067868 -90521420 - L1PA2 LINE L1 0 6155 1 598 243 61 99 chr10 55068058 55068321 -90520967 - MIR SINE MIR 0 262 10 2216 129 0 0 chr10 55068366 55068677 -90520611 + AluSq SINE Alu 1 311 -2 249 57 0 0 chr10 55069327 55069362 -90519926 + (TG)n Simple_repeat Simple_repeat 2 36 0 2081 123 0 19 chr10 55069631 55069941 -90519347 - AluSq SINE Alu -9 304 1 1022 193 0 5 chr10 55069964 55070151 -90519137 - AluJo SINE Alu -5 307 122 222 250 0 0 chr10 55070317 55070369 -90518919 + L2 LINE L2 3220 3271 -1 1771 164 7 3 chr10 55071482 55071769 -90517519 - AluSx SINE Alu -24 288 1 18691 96 6 6 chr10 55071911 55074628 -90514660 - L1P LINE L1 -1146 5000 2282 5666 220 8 8 chr10 55074839 55076173 -90513115 - L1 LINE L1 -793 5353 4020 846 234 59 18 chr10 55077319 55077541 -90511747 - MIR SINE MIR -11 251 21 4423 48 11 2 chr10 55077869 55078500 -90510788 + L1PA7 LINE L1 5192 5828 -326 1895 116 83 0 chr10 55078501 55078777 -90510511 + AluSg SINE Alu 1 299 -11 188 402 12 0 chr10 55086171 55086253 -90503035 - L2 LINE L2 -667 2647 2565 356 200 71 12 chr10 55086345 55086430 -90502858 + MIR SINE MIR 165 254 -8 186 167 0 0 chr10 55086708 55086744 -90502544 + (TAGA)n Simple_repeat Simple_repeat 3 38 0 342 269 104 53 chr10 55087036 55087344 -90501944 + L1M4 LINE L1 2764 3096 -3050 1395 247 136 21 chr10 55089173 55089829 -90499459 + HAL1b LINE L1 408 1138 -210 207 0 0 0 chr10 55090637 55090660 -90498628 + (A)n Simple_repeat Simple_repeat 1 23 0 552 262 93 126 chr10 55090798 55091282 -90498006 - L2 LINE L2 -11 3302 2835 1331 170 4 78 chr10 55093544 55093814 -90495474 + AluJo SINE Alu 50 299 -13 2176 116 7 7 chr10 55093849 55094159 -90495129 - AluSx SINE Alu -2 310 1 21 0 0 0 chr10 55094172 55094193 -90495095 + AT_rich Low_complexity Low_complexity 1 21 0 7457 25 0 1 chr10 55094193 55095618 -90493670 - L1PA3 LINE L1 0 6155 4738 6994 23 1 0 chr10 55095618 55096440 -90492848 + L1PA3 LINE L1 3908 4730 -1416 291 320 124 21 chr10 55096543 55096640 -90492648 + L2 LINE L2 3146 3252 -20 263 260 0 0 chr10 55098021 55098094 -90491194 + A-rich Low_complexity Low_complexity 1 73 0 30 0 0 0 chr10 55098267 55098297 -90490991 + AT_rich Low_complexity Low_complexity 1 30 0 918 206 0 0 chr10 55102533 55102688 -90486600 - AluJb SINE Alu -27 285 131 250 298 135 35 chr10 55103032 55103173 -90486115 - MER5A DNA MER1_type 0 189 35 757 283 81 33 chr10 55103621 55103928 -90485360 + MLT1I LTR MaLR 88 409 0 835 226 111 0 chr10 55104591 55104790 -90484498 + MER58A DNA MER1_type 4 224 0 308 282 47 0 chr10 55105074 55105159 -90484129 + L1MC4 LINE L1 6615 6703 -1339 250 116 14 72 chr10 55105188 55105257 -90484031 - LTR57-int LTR ERVL -4393 950 886 272 131 0 66 chr10 55105279 55105340 -90483948 - LTR57-int LTR ERVL -4406 937 881 387 317 0 0 chr10 55105340 55105520 -90483768 + (CATATA)n Simple_repeat Simple_repeat 1 180 0 384 293 58 5 chr10 55105662 55105850 -90483438 - L1M4 LINE L1 -1431 4715 4518 356 256 93 54 chr10 55105972 55105986 -90483302 - L1M4 LINE L1 -1812 4334 4322 2064 122 10 3 chr10 55105986 55106282 -90483006 - AluSx SINE Alu -14 298 1 356 256 93 54 chr10 55106282 55106525 -90482763 - L1M4 LINE L1 -1824 4322 4067 337 333 32 32 chr10 55106618 55106804 -90482484 - L1M4 LINE L1 -2222 3924 3739 1324 188 20 16 chr10 55106819 55107064 -90482224 - AluJo SINE Alu -25 287 42 484 319 86 30 chr10 55107205 55107499 -90481789 + L1ME3A LINE L1 5374 5712 -458 378 0 0 0 chr10 55107499 55107541 -90481747 + (TA)n Simple_repeat Simple_repeat 2 43 0 484 319 86 30 chr10 55107541 55107725 -90481563 + L1ME3A LINE L1 5712 5884 -286 411 83 0 0 chr10 55107847 55107907 -90481381 + (TATATG)n Simple_repeat Simple_repeat 6 65 0 538 221 35 71 chr10 55108164 55108319 -90480969 - MER63 DNA MER1_type -93 969 825 1466 174 9 73 chr10 55108319 55108636 -90480652 + AluJo SINE Alu 7 303 -9 538 221 35 71 chr10 55108636 55108729 -90480559 - MER63 DNA MER1_type -237 825 730 1489 186 29 7 chr10 55108729 55109003 -90480285 + MLT2B2 LTR ERVL 3 282 -233 2329 93 0 10 chr10 55109024 55109326 -90479962 - AluSq SINE Alu -14 299 1 1610 169 13 42 chr10 55109330 55109637 -90479651 - AluJo SINE Alu -14 298 1 294 29 0 0 chr10 55112246 55112281 -90477007 + (CA)n Simple_repeat Simple_repeat 1 35 0 203 146 24 0 chr10 55112480 55112521 -90476767 + GA-rich Low_complexity Low_complexity 1 42 0 198 263 0 0 chr10 55113441 55113498 -90475790 + GA-rich Low_complexity Low_complexity 4 60 0 1904 149 6 29 chr10 55113517 55113833 -90475455 + AluJb SINE Alu 3 311 -1 24 0 0 0 chr10 55115927 55115951 -90473337 + AT_rich Low_complexity Low_complexity 1 24 0 26 0 0 0 chr10 55120798 55120824 -90468464 + AT_rich Low_complexity Low_complexity 1 26 0 575 231 90 47 chr10 55121925 55122137 -90467151 - L1MC4a LINE L1 -1894 5914 5694 203 325 24 24 chr10 55123033 55123116 -90466172 + MIR SINE MIR 7 89 -173 21 36 0 0 chr10 55123873 55123901 -90465387 + AT_rich Low_complexity Low_complexity 1 28 0 13376 150 45 10 chr10 55124573 55124725 -90464563 + Tigger1 DNA MER2_type 2 147 -2271 2634 30 0 0 chr10 55124725 55125023 -90464265 + AluY SINE Alu 1 298 -13 13376 150 45 10 chr10 55125023 55127205 -90462083 + Tigger1 DNA MER2_type 147 2418 0 314 247 157 33 chr10 55127223 55127431 -90461857 + L1MC/D LINE L1 5507 5746 -488 2244 129 0 0 chr10 55127653 55127962 -90461326 - AluSx SINE Alu -1 311 3 2122 128 0 0 chr10 55128177 55128481 -90460807 + AluSx SINE Alu 1 304 -8 22 0 0 0 chr10 55129379 55129401 -90459887 + AT_rich Low_complexity Low_complexity 1 22 0 586 116 214 0 chr10 55129461 55129573 -90459715 + MLT1J2 LTR MaLR 1 136 -314 343 242 113 0 chr10 55129644 55129768 -90459520 + MLT1J1 LTR MaLR 254 391 -55 27 29 0 0 chr10 55129780 55129814 -90459474 + AT_rich Low_complexity Low_complexity 1 34 0 213 213 0 43 chr10 55130004 55130051 -90459237 + L2 LINE L2 3254 3298 -15 799 309 17 0 chr10 55130140 55130373 -90458915 - MIR SINE MIR -14 248 12 1716 151 0 0 chr10 55130548 55130852 -90458436 + AluSx SINE Alu 55 358 0 361 282 72 33 chr10 55131781 55131962 -90457326 + MER5A DNA MER1_type 2 189 0 241 343 63 46 chr10 55132043 55132218 -90457070 - MIR SINE MIR -19 243 66 451 259 81 32 chr10 55132545 55132730 -90456558 + L2 LINE L2 3116 3309 -4 189 0 0 0 chr10 55132837 55132858 -90456430 + (TTTA)n Simple_repeat Simple_repeat 4 24 0 1855 101 3 56 chr10 55132858 55133146 -90456142 - AluY SINE Alu -35 276 4 658 263 23 17 chr10 55133720 55133895 -90455393 - MER5B DNA MER1_type 0 178 3 278 77 0 0 chr10 55134474 55134513 -90454775 + L1PA5 LINE L1 6108 6146 -8 200 159 0 12 chr10 55134632 55134720 -90454568 + CT-rich Low_complexity Low_complexity 1 86 0 758 234 6 6 chr10 55135196 55135371 -90453917 - MER5B DNA MER1_type -3 175 1 2260 94 0 23 chr10 55135589 55135897 -90453391 + AluSg SINE Alu 1 301 -9 373 189 0 2 chr10 55136787 55136858 -90452430 - FLAM SINE Alu -3 130 69 281 194 30 0 chr10 55137290 55137357 -90451931 - L1ME LINE L1 -529 5592 5524 239 368 80 8 chr10 55137664 55137789 -90451499 + MER5A DNA MER1_type 38 171 -18 213 39 0 0 chr10 55138361 55138387 -90450901 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 2417 82 0 3 chr10 55139073 55139376 -90449912 + AluSq SINE Alu 1 302 -11 604 323 5 5 chr10 55140375 55140564 -90448724 - MIR SINE MIR -72 190 2 442 250 123 41 chr10 55141502 55141722 -90447566 + MIR SINE MIR 15 252 -10 1347 189 52 61 chr10 55142235 55142578 -90446710 - MER58B DNA MER1_type 0 341 2 2516 151 15 11 chr10 55142686 55143144 -90446144 + L1MB2 LINE L1 5685 6144 -27 24 0 0 0 chr10 55143155 55143179 -90446109 + AT_rich Low_complexity Low_complexity 1 24 0 209 152 0 0 chr10 55143870 55143903 -90445385 - MER5A DNA MER1_type 0 189 157 1149 214 22 50 chr10 55143907 55144271 -90445017 - L1P LINE L1 -743 5403 5050 980 154 48 43 chr10 55144271 55144479 -90444809 + L1PA16 LINE L1 5958 6166 0 231 360 7 44 chr10 55144486 55144622 -90444666 + MER5A DNA MER1_type 49 179 -10 394 245 31 92 chr10 55145475 55145625 -90443663 - MIR SINE MIR 0 262 125 2164 114 16 3 chr10 55145625 55145932 -90443356 + AluSq SINE Alu 1 311 -2 394 245 31 92 chr10 55145932 55145977 -90443311 - MIR SINE MIR -137 125 79 336 318 86 34 chr10 55146138 55146371 -90442917 + MIR SINE MIR 13 257 -5 210 143 0 0 chr10 55146375 55146410 -90442878 + (ATG)n Simple_repeat Simple_repeat 3 37 0 22 56 0 0 chr10 55147112 55147148 -90442140 + AT_rich Low_complexity Low_complexity 1 36 0 25 0 0 0 chr10 55147611 55147636 -90441652 + AT_rich Low_complexity Low_complexity 1 25 0 243 286 13 0 chr10 55148014 55148091 -90441197 + (TA)n Simple_repeat Simple_repeat 2 79 0 446 210 8 0 chr10 55148098 55148217 -90441071 + (TATATG)n Simple_repeat Simple_repeat 3 122 0 23 0 0 0 chr10 55148394 55148417 -90440871 + AT_rich Low_complexity Low_complexity 1 23 0 1711 162 4 0 chr10 55148969 55149247 -90440041 + AluSx SINE Alu 2 280 -32 6163 179 110 3 chr10 55150342 55151586 -90437702 + MER52A LTR ERV1 379 1755 0 702 169 8 0 chr10 55151601 55151725 -90437563 - MLT1H1 LTR MaLR -1 554 430 581 258 41 68 chr10 55151770 55152187 -90437101 - MER57A LTR ERV1 0 403 19 602 258 133 55 chr10 55152193 55152538 -90436750 - MLT1H1 LTR MaLR -182 373 2 234 320 186 10 chr10 55152586 55152683 -90436605 + L2 LINE L2 3117 3230 -42 1122 220 89 30 chr10 55153817 55154154 -90435134 + MLT1A2 LTR MaLR 1 357 -17 23 0 0 0 chr10 55154223 55154246 -90435042 + AT_rich Low_complexity Low_complexity 1 23 0 541 309 30 39 chr10 55155016 55155249 -90434039 + MIR SINE MIR 29 259 -3 30 0 0 0 chr10 55155821 55155851 -90433437 + AT_rich Low_complexity Low_complexity 1 30 0 266 239 77 51 chr10 55156363 55156480 -90432808 + MIR SINE MIR 71 190 -72 22 56 0 0 chr10 55156618 55156654 -90432634 + AT_rich Low_complexity Low_complexity 1 36 0 275 326 93 8 chr10 55157735 55157864 -90431424 + MIR SINE MIR 113 252 -10 333 0 0 0 chr10 55159126 55159163 -90430125 + (CA)n Simple_repeat Simple_repeat 1 37 0 291 54 0 0 chr10 55159163 55159200 -90430088 + (TC)n Simple_repeat Simple_repeat 2 38 0 316 239 157 8 chr10 55161519 55161653 -90427635 - MIR SINE MIR -14 248 95 320 316 7 39 chr10 55162281 55162436 -90426852 - MIR SINE MIR -111 151 2 41878 41 3 1 chr10 55163134 55169278 -90420010 - L1PA3 LINE L1 0 6155 1 592 243 61 99 chr10 55169468 55169731 -90419557 - MIR SINE MIR 0 262 10 2259 128 0 0 chr10 55169776 55170088 -90419200 + AluSq SINE Alu 1 312 -1 231 61 0 0 chr10 55170734 55170767 -90418521 + (TG)n Simple_repeat Simple_repeat 2 34 0 2123 119 0 19 chr10 55171032 55171342 -90417946 - AluSq SINE Alu -9 304 1 1047 193 0 5 chr10 55171365 55171552 -90417736 - AluJo SINE Alu -5 307 122 226 250 0 0 chr10 55171718 55171770 -90417518 + L2 LINE L2 3220 3271 -1 1884 164 3 0 chr10 55172883 55173170 -90416118 - AluSx SINE Alu -24 288 1 26556 123 13 71 chr10 55173338 55178605 -90410683 - L1P LINE L1 -1172 4974 12 1257 216 89 27 chr10 55178620 55179101 -90410187 - L1M4 LINE L1 -754 5392 4882 201 143 0 0 chr10 55181800 55181835 -90407453 + (CA)n Simple_repeat Simple_repeat 2 36 0 2576 39 0 10 chr10 55182797 55183103 -90406185 - AluY SINE Alu -7 304 2 227 256 0 83 chr10 55183742 55183863 -90405425 + L1MC4 LINE L1 6998 7108 -934 1675 115 13 0 chr10 55183863 55184472 -90404816 - L1PA13 LINE L1 -1 6162 5499 231 337 30 72 chr10 55184930 55184990 -90404298 + MER5A DNA MER1_type 6 67 -122 2119 127 16 3 chr10 55184990 55185297 -90403991 - AluSq SINE Alu -2 311 1 231 337 30 72 chr10 55185297 55185402 -90403886 + MER5A DNA MER1_type 67 164 -25 458 231 15 39 chr10 55185624 55185754 -90403534 + MER46C DNA MER2_type 206 332 -6 564 281 42 65 chr10 55185776 55186036 -90403252 - MIR SINE MIR -3 259 6 204 40 0 0 chr10 55186114 55186139 -90403149 + (A)n Simple_repeat Simple_repeat 1 25 0 225 0 0 0 chr10 55186633 55186658 -90402630 + (TG)n Simple_repeat Simple_repeat 2 26 0 2101 113 48 0 chr10 55186800 55187092 -90402196 - AluSx SINE Alu -6 306 1 337 304 36 18 chr10 55187198 55187310 -90401978 + MER91B DNA MER1_type 10 123 -67 254 320 93 0 chr10 55187463 55187560 -90401728 - L3 LINE CR1 -1084 493 388 547 349 16 0 chr10 55188551 55188743 -90400545 + MIR SINE MIR 45 239 -23 25 51 0 0 chr10 55189197 55189236 -90400052 + AT_rich Low_complexity Low_complexity 1 39 0 30 45 0 0 chr10 55190021 55190065 -90399223 + AT_rich Low_complexity Low_complexity 1 44 0 264 179 51 0 chr10 55190083 55190200 -90399088 + (TA)n Simple_repeat Simple_repeat 1 123 0 21 0 0 0 chr10 55190296 55190317 -90398971 + AT_rich Low_complexity Low_complexity 1 21 0 363 258 46 54 chr10 55190397 55190640 -90398648 - L1MC4 LINE L1 -152 7890 7546 212 269 0 45 chr10 55191091 55191158 -90398130 + A-rich Low_complexity Low_complexity 1 64 0 22 0 0 0 chr10 55192604 55192626 -90396662 + AT_rich Low_complexity Low_complexity 1 22 0 347 316 14 50 chr10 55193818 55193957 -90395331 + MIR3 SINE MIR 75 208 0 2331 68 31 0 chr10 55195813 55196107 -90393181 + AluSc SINE Alu 1 303 -6 26 64 0 0 chr10 55197439 55197486 -90391802 + AT_rich Low_complexity Low_complexity 1 47 0 237 33 0 0 chr10 55198287 55198317 -90390971 + (TTG)n Simple_repeat Simple_repeat 2 31 0 180 0 0 0 chr10 55198317 55198337 -90390951 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 2078 95 22 0 chr10 55198337 55198611 -90390677 - AluSq SINE Alu -33 280 1 182 289 19 0 chr10 55198664 55198716 -90390572 - L2 LINE L2 0 3313 3261 309 253 111 38 chr10 55200708 55200831 -90388457 + MIR SINE MIR 3 133 -75 2097 109 0 0 chr10 55201310 55201635 -90387653 + AluSx SINE Alu 1 325 0 407 343 87 73 chr10 55202244 55202305 -90386983 + L3 LINE CR1 975 1034 -543 2153 112 41 46 chr10 55202305 55202671 -90386617 + THE1B LTR MaLR 1 364 0 407 343 87 73 chr10 55202671 55202992 -90386296 + L3 LINE CR1 1034 1370 -207 2236 168 12 66 chr10 55202992 55203169 -90386119 - MER65C LTR ERV1 0 461 276 2139 100 7 0 chr10 55203169 55203469 -90385819 + AluSx SINE Alu 1 302 0 2236 168 12 66 chr10 55203469 55203777 -90385511 - MER65C LTR ERV1 -185 276 1 407 343 87 73 chr10 55203777 55203968 -90385320 + L3 LINE CR1 1370 1557 -20 378 0 0 0 chr10 55203978 55204020 -90385268 + (CA)n Simple_repeat Simple_repeat 2 43 0 1464 252 125 21 chr10 55205660 55206152 -90383136 + MLT1F1 LTR MaLR 30 561 -6 4692 126 11 20 chr10 55206234 55206994 -90382294 - L1PA15 LINE L1 0 6165 5413 7718 21 21 2 chr10 55206999 55208181 -90381107 - L1PA3 LINE L1 0 6155 4966 9430 211 12 10 chr10 55208182 55210276 -90379012 - L1PA15 LINE L1 -749 5397 3298 1736 148 7 11 chr10 55210313 55210591 -90378697 - AluJb SINE Alu -35 277 1 400 326 30 30 chr10 55210884 55211019 -90378269 - L2 LINE L2 -1 3271 3137 2308 90 0 3 chr10 55211092 55211393 -90377895 + AluSc SINE Alu 1 300 -9 416 268 81 89 chr10 55211404 55211529 -90377759 + MIR SINE MIR 5 129 -133 912 218 136 33 chr10 55211529 55211859 -90377429 + MLT1A1 LTR MaLR 1 364 -1 416 268 81 89 chr10 55211859 55211979 -90377309 + MIR SINE MIR 129 248 -14 231 315 195 13 chr10 55212304 55212453 -90376835 - MLT1L LTR MaLR -9 606 431 1673 96 105 0 chr10 55216423 55216662 -90372626 - AluY SINE Alu -10 301 38 3719 260 102 10 chr10 55217714 55219019 -90370269 - L1MC4 LINE L1 -159 7883 6459 231 36 0 0 chr10 55219427 55219455 -90369833 + (CA)n Simple_repeat Simple_repeat 1 28 0 204 337 11 11 chr10 55219507 55219602 -90369686 - L3b LINE CR1 -343 1240 1146 200 321 62 12 chr10 55219669 55219750 -90369538 - L2 LINE L2 -15 3298 3214 448 285 131 19 chr10 55219887 55220101 -90369187 + Charlie8 DNA MER1_type 1 238 -2179 2161 116 3 0 chr10 55220346 55220638 -90368650 - AluSx SINE Alu -19 293 1 30 45 0 0 chr10 55221987 55222031 -90367257 + AT_rich Low_complexity Low_complexity 1 44 0 2861 162 115 57 chr10 55223461 55224148 -90365140 + LTR8A LTR ERV1 1 727 0 2351 106 6 0 chr10 55224192 55224503 -90364785 + AluSp SINE Alu 1 313 0 554 303 29 6 chr10 55224834 55225009 -90364279 + L2 LINE L2 3132 3310 -3 204 217 43 0 chr10 55225650 55225719 -90363569 + (TA)n Simple_repeat Simple_repeat 1 72 0 226 220 20 0 chr10 55226447 55226497 -90362791 + MLT1K LTR MaLR 181 231 -357 332 149 15 30 chr10 55226556 55226623 -90362665 - L2 LINE L2 -61 3252 3187 311 268 101 95 chr10 55226664 55226871 -90362417 + MLT1K LTR MaLR 275 486 -102 2207 109 3 3 chr10 55226871 55227175 -90362113 - AluSc SINE Alu -5 304 1 311 268 101 95 chr10 55227175 55227273 -90362015 + MLT1K LTR MaLR 486 582 -6 5106 75 16 10 chr10 55227758 55228442 -90360846 - LTR8 LTR ERV1 -3 688 1 379 295 140 30 chr10 55228588 55228788 -90360500 - MIR SINE MIR 0 262 41 2369 91 0 3 chr10 55228812 55229120 -90360168 + AluSx SINE Alu 1 307 -5 1982 175 39 32 chr10 55229815 55230362 -90358926 + MLT2A2 LTR ERVL 1 554 0 1105 153 74 0 chr10 55230984 55231173 -90358115 - MER3 DNA MER1_type -6 203 1 200 240 8 198 chr10 55231244 55231305 -90357983 - MER5A DNA MER1_type -83 106 35 2215 125 46 46 chr10 55231305 55231366 -90357922 - L1MA4 LINE L1 -11 6289 6229 1986 153 34 0 chr10 55231366 55231692 -90357596 - MER1B DNA MER1_type 0 337 1 2215 125 46 46 chr10 55231692 55232009 -90357279 - L1MA4 LINE L1 -71 6229 5908 2090 130 3 0 chr10 55232009 55232316 -90356972 - AluSx SINE Alu -4 308 1 2215 125 46 46 chr10 55232316 55232367 -90356921 - L1MA4 LINE L1 -391 5909 5859 200 240 8 198 chr10 55232367 55232426 -90356862 - MER5A DNA MER1_type -154 35 9 697 220 54 0 chr10 55232455 55232623 -90356665 + MER5B DNA MER1_type 2 178 0 935 212 16 0 chr10 55232634 55232818 -90356470 - MER5A DNA MER1_type -2 187 1 444 237 216 7 chr10 55232826 55232965 -90356323 + MER5A DNA MER1_type 22 189 0 782 242 21 5 chr10 55233091 55233277 -90356011 + MER5A DNA MER1_type 1 189 0 190 232 43 87 chr10 55233366 55233435 -90355853 + MIR SINE MIR 116 181 -81 205 257 29 86 chr10 55233445 55233515 -90355773 + MIR SINE MIR 116 181 -81 206 180 33 98 chr10 55233525 55233586 -90355702 + MIR SINE MIR 116 172 -90 2110 117 0 16 chr10 55234002 55234311 -90354977 - AluSx SINE Alu -8 304 1 3727 113 5 22 chr10 55234785 55235370 -90353918 - L1PA16 LINE L1 -2 6164 5590 654 250 26 0 chr10 55235821 55235973 -90353315 - MER5A DNA MER1_type 0 189 34 267 318 57 38 chr10 55235972 55236183 -90353105 - L2 LINE L2 -1313 2001 1787 * 240 289 52 62 chr10 55236665 55236762 -90352526 - MIR SINE MIR -75 133 38 606 147 22 7 chr10 55236772 55236908 -90352380 - MER3 DNA MER1_type 0 2622 2485 529 236 40 29 chr10 55237097 55237271 -90352017 - MER3 DNA MER1_type 0 209 34 346 288 71 9 chr10 55237403 55237615 -90351673 - L1MC4a LINE L1 -1911 5897 5673 1689 184 3 0 chr10 55237665 55237959 -90351329 - AluJb SINE Alu -3 309 15 254 135 0 0 chr10 55237961 55237998 -90351290 - AluJb SINE Alu -262 37 1 2224 130 0 0 chr10 55238256 55238564 -90350724 + AluSg SINE Alu 1 308 -2 21 0 0 0 chr10 55238725 55238746 -90350542 + AT_rich Low_complexity Low_complexity 1 21 0 1794 133 91 7 chr10 55239403 55239689 -90349599 - AluSx SINE Alu -2 310 1 210 105 0 0 chr10 55240795 55240833 -90348455 + (T)n Simple_repeat Simple_repeat 1 38 0 864 213 0 71 chr10 55240886 55240929 -90348359 - MER20 DNA MER1_type -1 218 174 1931 136 3 29 chr10 55240929 55241239 -90348049 - AluSp SINE Alu -11 302 1 864 213 0 71 chr10 55241239 55241406 -90347882 - MER20 DNA MER1_type -45 174 23 472 287 105 14 chr10 55241866 55242075 -90347213 - MIR SINE MIR 0 262 35 427 326 73 53 chr10 55242563 55242808 -90346480 + MIR SINE MIR 12 261 -1 432 295 54 32 chr10 55243267 55243526 -90345762 + MLT1K LTR MaLR 8 261 -354 3170 113 147 4 chr10 55243619 55244142 -90345146 + LTR18B LTR ERVL 2 599 -15 196 281 65 85 chr10 55244372 55244525 -90344763 + L2 LINE L2 3123 3272 0 596 302 78 25 chr10 55245684 55245929 -90343359 + MIR SINE MIR 5 262 0 422 301 9 9 chr10 55246587 55246700 -90342588 + L2 LINE L2 3160 3272 0 216 220 18 133 chr10 55247462 55247685 -90341603 + MER5C DNA MER1_type 6 324 0 200 208 0 14 chr10 55247764 55247836 -90341452 + (TA)n Simple_repeat Simple_repeat 2 72 0 30 59 0 0 chr10 55247852 55247903 -90341385 + AT_rich Low_complexity Low_complexity 1 51 0 1934 142 0 3 chr10 55248195 55248500 -90340788 - AluSx SINE Alu 0 306 3 26 0 0 0 chr10 55249822 55249848 -90339440 + AT_rich Low_complexity Low_complexity 1 26 0 539 195 89 6 chr10 55250003 55250172 -90339116 - MER53 DNA DNA -4 185 3 309 339 79 6 chr10 55250264 55250429 -90338859 + MER69A DNA AcHobo 1 177 0 33 43 0 0 chr10 55252226 55252273 -90337015 + AT_rich Low_complexity Low_complexity 1 47 0 2090 124 0 3 chr10 55253008 55253314 -90335974 + AluSg SINE Alu 1 305 -5 308 321 42 63 chr10 55253819 55254009 -90335279 - MIR SINE MIR -73 189 4 1793 86 43 11 chr10 55256097 55256375 -90332913 - L1PA11 LINE L1 0 6174 5888 180 323 40 10 chr10 55257280 55257379 -90331909 - L2 LINE L2 -447 2867 2766 2239 255 151 15 chr10 55257391 55258591 -90330697 + L2 LINE L2 1939 3308 -5 666 296 35 132 chr10 55258619 55259361 -90329927 - L2 LINE L2 -580 2734 2065 430 203 78 88 chr10 55259391 55259608 -90329680 + MER58 DNA MER1_type 2203 2417 -3 1678 183 18 0 chr10 55259620 55259905 -90329383 - AluJb SINE Alu -22 290 1 2506 188 8 16 chr10 55260570 55261080 -90328208 - L1MB2 LINE L1 0 6171 5666 292 344 71 0 chr10 55261668 55261809 -90327479 + MIR SINE MIR 33 181 -73 2069 120 3 0 chr10 55262440 55262753 -90326535 - AluSx SINE Alu 0 314 1 446 251 219 5 chr10 55263238 55263425 -90325863 - MIR SINE MIR 0 262 36 1057 250 60 0 chr10 55268846 55269114 -90320174 - MER58 DNA MER1_type -2136 284 1 256 296 0 28 chr10 55270355 55270426 -90318862 + 7SK RNA RNA 1 69 -124 3499 116 48 27 chr10 55271532 55272104 -90317184 + L1MB3 LINE L1 5548 6135 -48 1966 130 28 0 chr10 55272104 55272389 -90316899 + AluSx SINE Alu 4 296 -16 3499 116 48 27 chr10 55272389 55272436 -90316852 + L1MB3 LINE L1 6135 6180 -3 785 266 93 13 chr10 55273076 55273313 -90315975 + MIR SINE MIR 7 262 0 272 387 10 23 chr10 55273400 55273542 -90315746 + MIR SINE MIR 22 145 -63 1436 195 39 39 chr10 55274166 55274473 -90314815 + AluJo SINE Alu 1 307 -5 31 0 0 0 chr10 55276196 55276227 -90313061 + AT_rich Low_complexity Low_complexity 1 31 0 21 57 0 0 chr10 55276735 55276770 -90312518 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr10 55278355 55278377 -90310911 + AT_rich Low_complexity Low_complexity 1 22 0 251 238 191 0 chr10 55278612 55278675 -90310613 + MER5A DNA MER1_type 52 126 -63 8082 157 20 13 chr10 55278807 55280619 -90308669 + L1M2 LINE L1 3816 5641 -650 470 265 111 32 chr10 55280660 55280849 -90308439 - MIR SINE MIR -53 209 6 901 292 58 6 chr10 55280909 55281234 -90308054 - MLT1I LTR MaLR -8 401 60 27 49 0 0 chr10 55281285 55281326 -90307962 + AT_rich Low_complexity Low_complexity 1 41 0 208 319 0 64 chr10 55281351 55281445 -90307843 + L2 LINE L2 3185 3272 0 453 282 51 74 chr10 55281457 55281608 -90307680 + MIR SINE MIR 2 142 -120 1771 155 28 3 chr10 55281608 55281892 -90307396 + AluSg SINE Alu 1 291 -19 453 282 51 74 chr10 55281892 55281956 -90307332 + MIR SINE MIR 142 206 -56 294 177 78 78 chr10 55282031 55282172 -90307116 - MER104 DNA Tc2 -35 145 5 21 36 0 0 chr10 55282197 55282225 -90307063 + AT_rich Low_complexity Low_complexity 1 28 0 391 267 89 79 chr10 55282282 55282597 -90306691 + MLT1L LTR MaLR 1 318 -297 3720 216 132 25 chr10 55283153 55284360 -90304928 - L1MC4 LINE L1 -1 8040 6492 346 271 194 39 chr10 55284584 55284739 -90304549 - MIR SINE MIR -55 207 29 557 299 40 99 chr10 55285899 55286273 -90303015 + L3 LINE CR1 1146 1497 -80 262 280 318 0 chr10 55286280 55286412 -90302876 - MER5A DNA MER1_type -6 183 10 475 125 0 0 chr10 55286740 55286824 -90302464 + FLAM_C SINE Alu 57 140 0 295 177 32 0 chr10 55287892 55287954 -90301334 + L3b LINE CR1 1116 1179 -404 306 310 17 24 chr10 55288877 55289164 -90300124 - AluSx SINE Alu -16 286 2 912 281 48 32 chr10 55289310 55289623 -90299665 + MLT1J LTR MaLR 177 494 -17 3637 155 8 1 chr10 55289623 55290639 -90298649 + L1PB1 LINE L1 4767 5792 -359 2309 127 5 3 chr10 55290685 55291054 -90298234 + L1PB1 LINE L1 5782 6151 0 546 274 29 0 chr10 55291121 55291296 -90297992 - MER46C DNA MER2_type -32 306 127 3272 139 2 0 chr10 55291296 55291792 -90297496 + LOR1a LTR ERV1 1 497 0 1777 192 26 56 chr10 55291793 55292221 -90297067 + LOR1a-int LTR ERV1 2 416 -7704 * 30174 114 49 32 chr10 55292189 55293364 -90295924 + LOR1a-int LTR ERV1 203 1357 -6763 2429 89 0 0 chr10 55293364 55293667 -90295621 - AluY SINE Alu -8 303 1 30174 114 49 32 chr10 55293667 55294110 -90295178 + LOR1a-int LTR ERV1 1357 1791 -6329 2115 114 7 0 chr10 55294110 55294400 -90294888 + AluY SINE Alu 17 308 -3 30174 114 49 32 chr10 55294400 55297478 -90291810 + LOR1a-int LTR ERV1 1791 4817 -3303 4926 155 49 46 chr10 55297478 55298546 -90290742 + MER11C LTR ERVK 1 1071 0 30174 114 49 32 chr10 55298546 55299026 -90290262 + LOR1a-int LTR ERV1 4817 5470 -2650 198 0 0 0 chr10 55299026 55299048 -90290240 + (TTTTG)n Simple_repeat Simple_repeat 4 25 0 30174 114 49 32 chr10 55299048 55299104 -90290184 + LOR1a-int LTR ERV1 5470 5524 -2596 1757 122 8 4 chr10 55299094 55299357 -90289931 + LOR1a-int LTR ERV1 5801 6064 -2056 * 602 103 46 0 chr10 55299356 55299443 -90289845 + LOR1a-int LTR ERV1 8030 8120 0 * 2950 134 46 4 chr10 55299458 55299919 -90289369 + LOR1a LTR ERV1 18 497 0 270 345 23 14 chr10 55300052 55300162 -90289126 - MIR SINE MIR -41 167 57 1564 240 44 32 chr10 55300383 55300879 -90288409 + L1ME1 LINE L1 5660 6161 -5 609 228 38 11 chr10 55301902 55302086 -90287202 - L1MB8 LINE L1 -326 5852 5664 430 317 96 34 chr10 55302919 55303241 -90286047 + L3 LINE CR1 1089 1430 -147 294 319 28 7 chr10 55303255 55303396 -90285892 + L1MC/D LINE L1 5578 5721 -2087 2983 216 91 13 chr10 55303427 55304828 -90284460 + L1PB1 LINE L1 136 1790 -5073 * 3146 120 71 4 chr10 55304819 55305371 -90283917 + L1PB1 LINE L1 2351 2939 -3924 6726 178 15 4 chr10 55305390 55305949 -90283339 + L1PB1 LINE L1 4555 5106 -1761 393 22 0 0 chr10 55305949 55305995 -90283293 + (TAAAA)n Simple_repeat Simple_repeat 2 47 0 6726 178 15 4 chr10 55305995 55307363 -90281925 + L1PB1 LINE L1 5106 6515 -352 420 71 0 0 chr10 55307363 55307419 -90281869 + (TG)n Simple_repeat Simple_repeat 2 57 0 6726 178 15 4 chr10 55307419 55307772 -90281516 + L1PB1 LINE L1 6515 6863 -4 199 219 52 0 chr10 55307929 55308025 -90281263 + (TA)n Simple_repeat Simple_repeat 1 101 0 217 337 56 0 chr10 55308357 55308446 -90280842 + MIR SINE MIR 56 149 -113 23 0 0 0 chr10 55308582 55308605 -90280683 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr10 55308657 55308678 -90280610 + AT_rich Low_complexity Low_complexity 1 21 0 321 115 13 141 chr10 55308766 55308844 -90280444 + Tigger2 DNA MER2_type 1 68 -2650 710 278 0 6 chr10 55308882 55309051 -90280237 - MER8 DNA MER2_type -62 177 10 1166 216 83 70 chr10 55309126 55309584 -90279704 + MLT1C LTR MaLR 2 465 -2 480 248 24 8 chr10 55309594 55309719 -90279569 + MER94 DNA DNA 6 132 -2 35 41 0 0 chr10 55309794 55309843 -90279445 + AT_rich Low_complexity Low_complexity 1 49 0 1700 159 6 40 chr10 55310197 55310518 -90278770 - AluJb SINE Alu -2 310 1 2054 112 4 0 chr10 55310634 55310951 -90278337 + AluSc SINE Alu 3 320 0 28 48 0 0 chr10 55311073 55311115 -90278173 + AT_rich Low_complexity Low_complexity 1 42 0 1615 177 22 42 chr10 55311752 55312063 -90277225 + AluJo SINE Alu 1 305 -7 831 305 23 27 chr10 55313119 55313378 -90275910 - MIR SINE MIR -1 261 4 279 315 1 0 chr10 55313528 55313607 -90275681 - MIR SINE MIR -60 148 73 2410 94 0 0 chr10 55313834 55314141 -90275147 - AluSq SINE Alu -6 307 1 638 287 43 6 chr10 55314757 55314921 -90274367 + MER5B DNA MER1_type 8 177 -1 23 0 0 0 chr10 55315065 55315088 -90274200 + AT_rich Low_complexity Low_complexity 1 23 0 180 0 0 0 chr10 55315641 55315661 -90273627 + (CAA)n Simple_repeat Simple_repeat 2 21 0 334 278 146 13 chr10 55315937 55316088 -90273200 + MIR SINE MIR 17 187 -75 703 170 48 136 chr10 55316110 55316316 -90272972 + MER5A DNA MER1_type 1 188 -1 191 247 143 97 chr10 55316716 55316870 -90272418 - L3 LINE CR1 -326 1251 1091 2187 97 3 7 chr10 55317335 55317635 -90271653 + AluSx SINE Alu 1 299 -13 2982 100 2 33 chr10 55318113 55318564 -90270724 - L1PA8 LINE L1 -33 6139 5703 2045 158 7 38 chr10 55318557 55318975 -90270313 + L1MA4A LINE L1 5700 6104 -199 * 739 215 81 16 chr10 55320931 55321117 -90268171 + MER3 DNA MER1_type 1 198 -11 2395 203 8 19 chr10 55321313 55321649 -90267639 - L1 LINE L1 -1403 4743 4413 2093 109 25 0 chr10 55321649 55321955 -90267333 - AluSx SINE Alu 0 313 1 2395 203 8 19 chr10 55321955 55322203 -90267085 - L1 LINE L1 -1733 4413 4164 275 330 80 0 chr10 55323117 55323229 -90266059 + MIR SINE MIR 28 148 -114 31 58 0 0 chr10 55325975 55326027 -90263261 + AT_rich Low_complexity Low_complexity 1 52 0 409 255 137 31 chr10 55326636 55326797 -90262491 - MER5A DNA MER1_type -5 184 7 199 294 101 46 chr10 55326805 55326914 -90262374 + L3b LINE CR1 1336 1450 -133 2325 98 3 0 chr10 55326967 55327263 -90262025 + AluSq SINE Alu 3 299 -14 235 370 49 25 chr10 55327951 55328113 -90261175 + L2 LINE L2 1111 1276 -2038 1710 146 47 58 chr10 55328113 55328455 -90260833 - MER44D DNA MER2_type -1 608 1 3194 100 7 0 chr10 55328455 55328894 -90260394 + MER41A LTR ERV1 3 444 -110 1480 142 12 24 chr10 55328914 55329161 -90260127 - AluSx SINE Alu -63 249 6 264 345 61 20 chr10 55330923 55331120 -90258168 - MLT1K LTR MaLR -220 368 164 245 388 35 0 chr10 55333001 55333117 -90256171 + MIR SINE MIR 48 167 -95 650 169 59 0 chr10 55333139 55333275 -90256013 + L1MA4A LINE L1 6148 6291 -12 212 346 83 49 chr10 55333478 55333744 -90255544 - L2 LINE L2 -190 3082 2808 1982 294 130 38 chr10 55334912 55335358 -90253930 - L2 LINE L2 -1653 1661 1258 2439 60 0 0 chr10 55335358 55335658 -90253630 - AluY SINE Alu -2 309 10 1982 294 130 38 chr10 55335658 55336080 -90253208 - L2 LINE L2 -2056 1258 876 1510 214 76 0 chr10 55336080 55336397 -90252891 - MER2 DNA MER2_type -2 342 2 1982 294 130 38 chr10 55336397 55336412 -90252876 - L2 LINE L2 -2438 876 864 2143 196 46 0 chr10 55336412 55336825 -90252463 - MSTB1 LTR MaLR 0 432 1 1982 294 130 38 chr10 55336825 55336921 -90252367 - L2 LINE L2 -2450 864 589 473 229 44 4 chr10 55337684 55337720 -90251568 + MER63 DNA MER1_type 1 34 -1027 335 23 23 0 chr10 55337720 55337764 -90251524 + (CAAAA)n Simple_repeat Simple_repeat 1 45 0 473 229 44 4 chr10 55337764 55337933 -90251355 + MER63 DNA MER1_type 34 294 -767 1430 168 16 56 chr10 55337977 55338281 -90251007 + AluJo SINE Alu 8 299 -13 2290 192 20 20 chr10 55338283 55338784 -90250504 + MER63 DNA MER1_type 431 931 -130 21 82 0 0 chr10 55339125 55339174 -90250114 + AT_rich Low_complexity Low_complexity 1 49 0 225 94 0 0 chr10 55340723 55340755 -90248533 + (A)n Simple_repeat Simple_repeat 1 32 0 762 249 20 10 chr10 55341125 55341322 -90247966 + L1ME1 LINE L1 5964 6162 -4 180 206 143 0 chr10 55342048 55342111 -90247177 - L2 LINE L2 -1556 1758 1687 195 322 268 0 chr10 55343001 55343206 -90246082 - L2 LINE L2 -43 3270 3011 310 250 129 30 chr10 55343389 55343521 -90245767 + MIR SINE MIR 118 262 0 21 0 0 0 chr10 55343699 55343720 -90245568 + AT_rich Low_complexity Low_complexity 1 21 0 550 251 36 136 chr10 55343796 55344075 -90245213 + MIR SINE MIR 12 262 0 198 308 128 34 chr10 55344130 55344247 -90245041 + L2 LINE L2 3186 3313 0 342 389 23 8 chr10 55344265 55344396 -90244892 - MIR SINE MIR -116 146 14 255 297 36 54 chr10 55344560 55344671 -90244617 + MER5A DNA MER1_type 81 189 0 5644 105 40 11 chr10 55344708 55345050 -90244238 + L1PA13 LINE L1 5105 5436 -727 2248 112 0 0 chr10 55345050 55345353 -90243935 + AluSx SINE Alu 1 303 -9 5644 105 40 11 chr10 55345353 55346044 -90243244 + L1PA13 LINE L1 5436 6163 0 358 357 70 8 chr10 55347265 55347523 -90241765 + L1MC4a LINE L1 5012 5285 -861 403 296 194 21 chr10 55347532 55347954 -90241334 + L1MC4a LINE L1 5431 5925 -1883 7589 109 63 14 chr10 55348035 55349939 -90239349 + L1PA10 LINE L1 4171 6168 0 659 255 30 6 chr10 55351072 55351331 -90237957 - L1 LINE L1 -2746 3400 3134 329 311 113 18 chr10 55351438 55351628 -90237660 + MLT1K LTR MaLR 346 561 -27 207 0 0 0 chr10 55351628 55351651 -90237637 + (TG)n Simple_repeat Simple_repeat 1 23 0 329 311 113 18 chr10 55351651 55351682 -90237606 + MLT1K LTR MaLR 561 588 0 722 275 37 5 chr10 55352055 55352244 -90237044 - MIR SINE MIR 0 262 68 455 291 117 10 chr10 55352747 55352953 -90236335 - MIR SINE MIR -3 259 32 5059 214 10 19 chr10 55353688 55354894 -90234394 - L1 LINE L1 -2103 4043 2849 1255 124 0 6 chr10 55354911 55355088 -90234200 - AluSc SINE Alu -133 176 1 3723 155 10 13 chr10 55355124 55356177 -90233111 + L1PB1 LINE L1 4741 5791 -360 678 148 0 0 chr10 55356181 55356343 -90232945 + (TA)n Simple_repeat Simple_repeat 1 162 0 276 30 0 0 chr10 55356352 55356385 -90232903 + (CA)n Simple_repeat Simple_repeat 2 34 0 2193 108 51 8 chr10 55356385 55356729 -90232559 + L1PB1 LINE L1 5787 6148 -3 191 300 85 31 chr10 55357479 55357609 -90231679 - MIR SINE MIR -38 224 88 226 49 24 24 chr10 55357803 55357844 -90231444 + (TG)n Simple_repeat Simple_repeat 2 42 0 713 325 35 12 chr10 55358359 55358614 -90230674 - MIR SINE MIR 0 262 2 347 258 106 0 chr10 55358844 55358976 -90230312 + L1ME4a LINE L1 5708 5853 -268 320 214 25 31 chr10 55359527 55359686 -90229602 + (TA)n Simple_repeat Simple_repeat 1 158 0 1286 326 95 68 chr10 55360199 55361665 -90227623 - L2 LINE L2 -32 3281 1857 2066 134 0 0 chr10 55361665 55361956 -90227332 - AluSx SINE Alu -21 291 1 1286 326 95 68 chr10 55361956 55362044 -90227244 - L2 LINE L2 -1456 1857 1773 1773 168 7 7 chr10 55362044 55362347 -90226941 - AluJb SINE Alu -7 305 3 1286 326 95 68 chr10 55362347 55362429 -90226859 - L2 LINE L2 -1540 1773 1612 271 356 67 0 chr10 55362456 55362560 -90226728 + L2 LINE L2 3187 3297 -16 237 329 146 36 chr10 55362557 55362858 -90226430 - L2 LINE L2 -1687 1627 1294 * 578 113 52 41 chr10 55362876 55362973 -90226315 - MER41A LTR ERV1 -8 546 449 2506 166 43 10 chr10 55363073 55363556 -90225732 - L1MC1 LINE L1 -27 6306 5808 607 326 45 5 chr10 55364210 55364434 -90224854 + MIR SINE MIR 4 236 -26 1217 187 45 119 chr10 55364666 55365068 -90224220 + MLT1A2 LTR MaLR 3 374 0 281 292 193 12 chr10 55365514 55365685 -90223603 + MIR3 SINE MIR 3 204 -4 25 31 0 0 chr10 55366204 55366236 -90223052 + AT_rich Low_complexity Low_complexity 1 32 0 5007 140 16 31 chr10 55366390 55367424 -90221864 - L1PB4 LINE L1 0 6156 5138 1194 268 46 26 chr10 55367398 55367902 -90221386 - HAL1b LINE L1 -672 676 163 * 810 347 30 40 chr10 55368101 55368499 -90220789 + L2 LINE L2 48 441 -2873 409 288 84 16 chr10 55369025 55369216 -90220072 - Charlie8 DNA MER1_type -2173 244 41 274 319 43 0 chr10 55369372 55369466 -90219822 + L2 LINE L2 2281 2378 -936 343 311 98 77 chr10 55369675 55370013 -90219275 + L1MEd LINE L1 400 744 -5375 324 297 36 24 chr10 55370156 55370321 -90218967 + L1MEd LINE L1 977 1143 -4976 248 334 80 24 chr10 55370361 55370738 -90218550 + L1MEd LINE L1 2299 2696 -3433 344 236 96 55 chr10 55370770 55370969 -90218319 + L1MC4a LINE L1 5192 5398 -748 203 133 0 0 chr10 55370974 55371004 -90218284 + (TCCC)n Simple_repeat Simple_repeat 3 32 0 912 189 13 0 chr10 55371004 55371163 -90218125 - FRAM SINE Alu -18 158 1 844 306 74 25 chr10 55371163 55371647 -90217641 + L1MC4a LINE L1 5387 5894 -1914 183 184 0 0 chr10 55371881 55371919 -90217369 + (CATATA)n Simple_repeat Simple_repeat 2 39 0 21 0 0 0 chr10 55371951 55371972 -90217316 + AT_rich Low_complexity Low_complexity 1 21 0 21933 155 28 10 chr10 55373102 55376704 -90212584 - L1 LINE L1 -2840 4725 1024 3162 167 31 28 chr10 55376704 55377314 -90211974 + LTR9 LTR ERV1 1 612 0 21933 155 28 10 chr10 55377314 55378346 -90210942 - L1 LINE L1 -6541 1024 11 688 183 0 0 chr10 55378347 55378462 -90210826 + Tigger1 DNA MER2_type 2304 2418 0 436 304 25 25 chr10 55378795 55378956 -90210332 + MLT1K LTR MaLR 16 176 -412 268 306 0 0 chr10 55383746 55383808 -90205480 + polypyrimidine Low_complexity Low_complexity 1 62 0 247 184 0 20 chr10 55384668 55384717 -90204571 + MLT1K LTR MaLR 540 587 -1 559 242 137 0 chr10 55385288 55385441 -90203847 + MIR SINE MIR 79 252 -10 22 0 0 0 chr10 55385612 55385634 -90203654 + AT_rich Low_complexity Low_complexity 1 22 0 228 287 30 20 chr10 55385989 55386090 -90203198 + MLT1K LTR MaLR 405 506 -82 1823 127 8 4 chr10 55386395 55386662 -90202626 + AluSq SINE Alu 1 268 -45 21 0 0 0 chr10 55389360 55389381 -90199907 + AT_rich Low_complexity Low_complexity 1 21 0 27 0 0 0 chr10 55390501 55390528 -90198760 + AT_rich Low_complexity Low_complexity 1 27 0 413 233 150 23 chr10 55391462 55391595 -90197693 - MIR SINE MIR 0 262 113 273 276 47 55 chr10 55391905 55392032 -90197256 - MIR SINE MIR -98 164 39 2151 100 3 0 chr10 55393309 55393599 -90195689 + AluSc SINE Alu 1 291 -18 13644 142 14 19 chr10 55393616 55394144 -90195144 + Tigger1 DNA MER2_type 1 530 -1888 2477 132 0 3 chr10 55394144 55394509 -90194779 - THE1B LTR MaLR 0 364 1 11312 102 7 2 chr10 55394509 55396081 -90193207 - THE1B-int LTR MaLR 0 1580 2 2221 158 28 3 chr10 55396082 55396437 -90192851 - THE1B LTR MaLR 0 364 1 13644 142 14 19 chr10 55396437 55398180 -90191108 + Tigger1 DNA MER2_type 528 2265 -153 10406 165 19 7 chr10 55398258 55401052 -90188236 - L1MA3 LINE L1 -215 6090 3262 330 26 0 0 chr10 55401237 55401276 -90188012 + (TG)n Simple_repeat Simple_repeat 1 39 0 381 58 0 0 chr10 55401278 55401330 -90187958 + (GA)n Simple_repeat Simple_repeat 1 52 0 206 349 19 28 chr10 55402083 55402189 -90187099 + MIR SINE MIR 3 107 -155 285 303 48 44 chr10 55402480 55402590 -90186698 + L1ME LINE L1 5616 5724 -397 2280 100 0 3 chr10 55402590 55402901 -90186387 + AluY SINE Alu 1 310 -1 285 303 48 44 chr10 55402901 55403018 -90186270 + L1ME LINE L1 5724 5844 -277 295 252 32 49 chr10 55403441 55403564 -90185724 + MLT1K LTR MaLR 468 588 0 23 0 0 0 chr10 55403694 55403717 -90185571 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr10 55403762 55403784 -90185504 + AT_rich Low_complexity Low_complexity 1 22 0 462 273 45 34 chr10 55406651 55406827 -90182461 - L1ME LINE L1 -361 5760 5583 2527 62 0 3 chr10 55406861 55407170 -90182118 - AluY SINE Alu -2 309 2 28 61 0 0 chr10 55407254 55407303 -90181985 + AT_rich Low_complexity Low_complexity 1 49 0 335 294 73 48 chr10 55407507 55407796 -90181492 - L1ME LINE L1 -860 5286 4991 29 47 0 0 chr10 55407814 55407857 -90181431 + AT_rich Low_complexity Low_complexity 1 43 0 2546 36 7 0 chr10 55407939 55408242 -90181046 + AluY SINE Alu 1 305 -6 367 343 135 15 chr10 55408328 55408786 -90180502 + HAL1 LINE L1 1410 1922 -585 320 300 100 27 chr10 55409194 55409344 -90179944 + HAL1b LINE L1 751 911 -437 289 260 27 14 chr10 55409871 55409944 -90179344 + MLT1J LTR MaLR 72 145 -366 595 281 16 21 chr10 55409953 55410145 -90179143 + MLT1J LTR MaLR 72 262 -249 877 246 32 0 chr10 55410561 55410781 -90178507 + L1MB7 LINE L1 4679 4905 -1241 * 9355 31 0 6 chr10 55410776 55411909 -90177379 - L1PA5 LINE L1 -1098 5048 3923 7186 45 5 2 chr10 55411909 55413003 -90176285 + L1PA5 LINE L1 5052 6147 -7 272 191 0 0 chr10 55413018 55413065 -90176223 + L1MB7 LINE L1 4889 4935 -1211 320 0 0 0 chr10 55413071 55413115 -90176173 - AluY SINE Alu 0 302 259 3910 206 58 8 chr10 55413116 55413598 -90175690 + L1MB7 LINE L1 4922 5378 -806 1862 80 16 0 chr10 55413598 55413842 -90175446 + L1PA7 LINE L1 5896 6150 -4 3910 206 58 8 chr10 55413842 55414526 -90174762 + L1MB7 LINE L1 5378 6156 -28 252 216 0 0 chr10 55415299 55415350 -90173938 + MER4B-int LTR ERV1 1146 1196 -5562 29 70 0 0 chr10 55416357 55416414 -90172874 + AT_rich Low_complexity Low_complexity 1 57 0 50 59 0 0 chr10 55416641 55416726 -90172562 + AT_rich Low_complexity Low_complexity 1 85 0 664 260 176 12 chr10 55416830 55417246 -90172042 + L1MC/D LINE L1 5288 5771 -2037 23 54 0 0 chr10 55417718 55417755 -90171533 + AT_rich Low_complexity Low_complexity 1 37 0 397 278 81 21 chr10 55418539 55418754 -90170534 + L1P4 LINE L1 5610 5833 -302 268 292 0 0 chr10 55418926 55418998 -90170290 - MLT1L LTR MaLR 0 615 544 427 292 9 0 chr10 55419166 55419279 -90170009 + MER94 DNA DNA 1 114 -20 259 259 0 0 chr10 55419528 55419582 -90169706 + Charlie1 DNA MER1_type 1 54 -2707 871 215 14 42 chr10 55419622 55419836 -90169452 + AluJo SINE Alu 2 209 -103 601 194 23 0 chr10 55419904 55420033 -90169255 + Charlie1 DNA MER1_type 2620 2751 -10 21 71 0 0 chr10 55420277 55420319 -90168969 + AT_rich Low_complexity Low_complexity 1 42 0 230 316 35 9 chr10 55420519 55420633 -90168655 - L1M4 LINE L1 -2314 3832 3716 887 250 42 19 chr10 55420792 55421004 -90168284 - MIR SINE MIR -25 237 21 1543 309 111 22 chr10 55421222 55422127 -90167161 - L2 LINE L2 0 3313 2327 1544 230 60 50 chr10 55422127 55422627 -90166661 - MLT1D LTR MaLR 0 505 1 1543 309 111 22 chr10 55422627 55422651 -90166637 - L2 LINE L2 -986 2327 2307 26 30 0 0 chr10 55422795 55422828 -90166460 + AT_rich Low_complexity Low_complexity 1 33 0 509 259 163 21 chr10 55423164 55423496 -90165792 - L1ME4a LINE L1 -157 5964 5586 522 315 68 9 chr10 55423838 55424057 -90165231 - MIR SINE MIR -13 249 18 189 0 0 0 chr10 55424120 55424141 -90165147 + (TTCA)n Simple_repeat Simple_repeat 3 23 0 363 306 36 0 chr10 55424152 55424263 -90165025 - L2 LINE L2 -21 3292 3178 368 256 60 51 chr10 55424424 55424541 -90164747 + L2 LINE L2 3184 3301 -12 318 228 62 107 chr10 55426053 55426277 -90163011 - LTR41 LTR ERVL -125 648 435 343 258 159 40 chr10 55426409 55426560 -90162728 - LTR41 LTR ERVL -595 178 10 705 278 66 29 chr10 55426986 55427227 -90162061 + MIR SINE MIR 13 262 0 223 317 242 11 chr10 55428726 55428912 -90160376 - MIR SINE MIR -6 256 28 344 296 59 24 chr10 55428946 55429115 -90160173 + MIR SINE MIR 58 232 -30 1519 86 10 0 chr10 55429281 55429522 -90159766 - AluSg/x SINE Alu 0 324 82 21 0 0 0 chr10 55431799 55431820 -90157468 + AT_rich Low_complexity Low_complexity 1 21 0 192 273 61 30 chr10 55432584 55432650 -90156638 + MIR3 SINE MIR 138 205 -3 367 348 82 30 chr10 55432745 55433015 -90156273 + L2 LINE L2 2227 2510 -804 827 188 40 17 chr10 55433268 55433444 -90155844 - MLT1A2 LTR MaLR 0 374 195 1030 155 141 69 chr10 55433476 55433767 -90155521 + MER33 DNA MER1_type 4 315 -9 1954 154 52 3 chr10 55434705 55435049 -90154239 + MLT1A1 LTR MaLR 1 361 -4 995 282 67 48 chr10 55435496 55436304 -90152984 - L1MC4 LINE L1 0 8042 7270 2049 142 15 45 chr10 55436631 55437032 -90152256 - MLT1B LTR MaLR -1 389 1 687 276 140 47 chr10 55437160 55437704 -90151584 + L2 LINE L2 2713 3313 0 266 324 106 17 chr10 55437770 55437949 -90151339 + MIR SINE MIR 2 196 -66 266 270 102 29 chr10 55438352 55438489 -90150799 - MIR3 SINE MIR -15 193 47 429 281 94 62 chr10 55439990 55440067 -90149221 + MIR SINE MIR 56 129 -133 1907 141 3 24 chr10 55440067 55440365 -90148923 + AluJb SINE Alu 1 292 -20 429 281 94 62 chr10 55440365 55440447 -90148841 + MIR SINE MIR 129 220 -42 27 0 0 0 chr10 55440495 55440522 -90148766 + AT_rich Low_complexity Low_complexity 1 27 0 2410 70 3 0 chr10 55440926 55441242 -90148046 - L1PA6 LINE L1 -9 6145 5829 22 56 0 0 chr10 55442289 55442325 -90146963 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr10 55442752 55442773 -90146515 + AT_rich Low_complexity Low_complexity 1 21 0 2443 132 81 5 chr10 55442789 55443221 -90146067 - L1PA14 LINE L1 -3 6158 5694 2239 127 0 3 chr10 55444213 55444527 -90144761 + AluSq SINE Alu 1 313 0 24 0 0 0 chr10 55446033 55446057 -90143231 + AT_rich Low_complexity Low_complexity 1 24 0 25 0 0 0 chr10 55446982 55447007 -90142281 + AT_rich Low_complexity Low_complexity 1 25 0 30 59 0 0 chr10 55447532 55447583 -90141705 + AT_rich Low_complexity Low_complexity 1 51 0 6181 130 50 9 chr10 55447666 55448673 -90140615 + HSMAR2 DNA Mariner 2 1049 -253 704 136 15 8 chr10 55448673 55448805 -90140483 + HSMAR2 DNA Mariner 1164 1296 -6 2194 94 0 27 chr10 55449125 55449423 -90139865 - AluSg SINE Alu -20 290 1 428 203 8 59 chr10 55449423 55449482 -90139806 + MIR SINE MIR 122 174 -88 5122 95 6 0 chr10 55449482 55450169 -90139119 - LTR8 LTR ERV1 0 691 1 428 203 8 59 chr10 55450169 55450227 -90139061 + MIR SINE MIR 174 233 -29 1547 182 71 0 chr10 55450535 55450804 -90138484 - AluJo SINE Alu -22 290 3 687 170 0 67 chr10 55451347 55451482 -90137806 - LTR8 LTR ERV1 -565 126 1 410 158 110 24 chr10 55451482 55451560 -90137728 - THE1C LTR MaLR -290 85 1 450 280 109 21 chr10 55451603 55451796 -90137492 - MIR SINE MIR -4 258 49 962 192 0 6 chr10 55451797 55451969 -90137319 - AluSg SINE Alu -8 302 132 6832 61 25 4 chr10 55451969 55452954 -90136334 - L1PA7 LINE L1 -1 6153 5156 2606 99 5 0 chr10 55452954 55453328 -90135960 + L1P LINE L1 4741 5116 -1030 1117 75 0 0 chr10 55453328 55453462 -90135826 - AluSg SINE Alu -176 134 1 3007 167 35 71 chr10 55453936 55454653 -90134635 + LTR8 LTR ERV1 1 691 0 1254 211 119 62 chr10 55455017 55455453 -90133835 + LTR37B LTR ERV1 8 468 0 456 298 71 75 chr10 55456324 55456606 -90132682 + MLT1K LTR MaLR 134 414 -174 330 320 23 8 chr10 55456777 55456905 -90132383 - MIR SINE MIR -132 130 1 2863 7 0 0 chr10 55456981 55457290 -90131998 + AluY SINE Alu 1 309 -2 376 203 42 51 chr10 55458182 55458300 -90130988 + L2 LINE L2 3197 3313 0 22 0 0 0 chr10 55458748 55458770 -90130518 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr10 55458813 55458835 -90130453 + AT_rich Low_complexity Low_complexity 1 22 0 203 247 26 13 chr10 55458940 55459017 -90130271 + (TA)n Simple_repeat Simple_repeat 2 79 0 304 312 86 80 chr10 55459053 55459377 -90129911 + L2 LINE L2 1739 2064 -1250 385 310 154 44 chr10 55459380 55459764 -90129524 + L2 LINE L2 2369 2794 -520 491 286 110 96 chr10 55459799 55460508 -90128780 + L2 LINE L2 2040 2758 -556 227 264 11 0 chr10 55461371 55461448 -90127840 - L2 LINE L2 -7 3265 3187 * 280 339 23 52 chr10 55461441 55461615 -90127673 - MIR SINE MIR -2 260 92 332 208 30 127 chr10 55461872 55462012 -90127276 + MLT1J LTR MaLR 383 614 -1 716 328 64 41 chr10 55462021 55462651 -90126637 + L2 LINE L2 2667 3313 0 1935 144 166 0 chr10 55462654 55463021 -90126267 - MSTA LTR MaLR 0 428 1 21 0 0 0 chr10 55463386 55463407 -90125881 + AT_rich Low_complexity Low_complexity 1 21 0 872 291 29 12 chr10 55463569 55463813 -90125475 + MIR SINE MIR 4 251 -11 1670 148 118 53 chr10 55463819 55464217 -90125071 - MSTA LTR MaLR -4 424 1 2188 110 7 0 chr10 55465693 55465992 -90123296 - AluSx SINE Alu -11 301 1 1620 183 127 71 chr10 55466396 55466805 -90122483 - MSTB LTR MaLR 0 432 1 1700 176 40 27 chr10 55467853 55468223 -90121065 - THE1C LTR MaLR 0 375 1 408 71 0 0 chr10 55469010 55469066 -90120222 + (TA)n Simple_repeat Simple_repeat 2 57 0 2052 109 3 14 chr10 55469191 55469515 -90119773 - AluSg SINE Alu 0 321 1 234 238 63 0 chr10 55469586 55469649 -90119639 - L1MA2 LINE L1 -51 6253 6187 293 187 8 0 chr10 55470949 55471016 -90118272 - MLT1F1 LTR MaLR -457 138 28 1865 255 44 4 chr10 55471030 55471481 -90117807 + MLT1H1 LTR MaLR 86 554 -1 256 322 74 7 chr10 55471842 55471991 -90117297 + L2 LINE L2 2687 2845 -469 1421 261 52 37 chr10 55472033 55472492 -90116796 + MLT1C LTR MaLR 1 466 -1 2139 104 0 3 chr10 55472863 55473150 -90116138 + AluSq SINE Alu 15 300 -13 21 0 0 0 chr10 55473389 55473410 -90115878 + AT_rich Low_complexity Low_complexity 1 21 0 827 275 30 21 chr10 55473928 55474161 -90115127 - MIR SINE MIR -25 237 3 186 170 19 57 chr10 55474450 55474503 -90114785 + L2 LINE L2 1740 1790 -1524 207 319 106 35 chr10 55476332 55476445 -90112843 + MIR SINE MIR 34 154 -108 400 233 122 14 chr10 55476665 55476804 -90112484 + MIR SINE MIR 40 192 -70 1996 110 0 10 chr10 55476821 55477120 -90112168 - AluY SINE Alu 0 311 16 3739 204 25 52 chr10 55477428 55478456 -90110832 + L1MA9 LINE L1 4550 5605 -707 1974 134 52 0 chr10 55478456 55478747 -90110541 + AluSx SINE Alu 1 306 -6 3739 204 25 52 chr10 55478747 55478783 -90110505 + L1MA9 LINE L1 5605 5640 -672 2099 135 0 13 chr10 55478783 55479086 -90110202 + AluSx SINE Alu 2 300 -12 3739 204 25 52 chr10 55479086 55479268 -90110020 + L1MA9 LINE L1 5640 5826 -486 291 28 0 0 chr10 55479268 55479304 -90109984 + (TG)n Simple_repeat Simple_repeat 2 37 0 3739 204 25 52 chr10 55479304 55479843 -90109445 + L1MA9 LINE L1 5826 6274 -38 204 313 45 0 chr10 55479927 55479994 -90109294 - MIR SINE MIR -37 225 156 682 161 0 0 chr10 55480001 55480113 -90109175 + L1MA8 LINE L1 5783 5894 -397 509 282 32 0 chr10 55480120 55480244 -90109044 - MIR SINE MIR -122 140 13 245 303 78 49 chr10 55481175 55481482 -90107806 + L1ME LINE L1 5566 5881 -240 28 102 0 0 chr10 55481545 55481643 -90107645 + AT_rich Low_complexity Low_complexity 1 98 0 635 194 206 0 chr10 55481993 55482163 -90107125 + MER3 DNA MER1_type 2 206 -3 274 202 70 105 chr10 55482286 55482400 -90106888 - L2 LINE L2 -16 3256 3147 421 373 73 5 chr10 55483331 55483551 -90105737 + MIR SINE MIR 20 254 -8 2167 117 0 7 chr10 55484314 55484644 -90104644 - AluSq SINE Alu 0 333 6 2214 89 0 36 chr10 55486454 55486756 -90102532 - AluSg SINE Alu -17 293 3 7043 180 107 90 chr10 55489400 55490384 -90098904 - Charlie5 DNA MER1_type -4 2620 1655 1879 160 3 14 chr10 55490384 55490677 -90098611 - AluJo SINE Alu -20 292 3 7043 180 107 90 chr10 55490677 55491280 -90098008 - Charlie5 DNA MER1_type -969 1655 1064 846 192 0 24 chr10 55491280 55491447 -90097841 - FRAM SINE Alu -13 163 1 7043 180 107 90 chr10 55491447 55492248 -90097040 - Charlie5 DNA MER1_type -1560 1064 20 2279 92 3 0 chr10 55492371 55492674 -90096614 - AluSq SINE Alu -9 304 1 640 272 83 31 chr10 55493763 55493991 -90095297 + MIR SINE MIR 6 245 -17 24 0 0 0 chr10 55494187 55494211 -90095077 + AT_rich Low_complexity Low_complexity 1 24 0 1197 184 12 119 chr10 55494214 55494534 -90094754 - AluJo SINE Alu -16 286 1 2249 107 3 0 chr10 55495078 55495369 -90093919 + AluSg SINE Alu 1 292 -18 722 136 15 8 chr10 55495689 55495821 -90093467 - HSMAR2 DNA Mariner -6 1296 1164 6298 130 50 9 chr10 55495821 55496828 -90092460 - HSMAR2 DNA Mariner -253 1049 2 30 59 0 0 chr10 55496911 55496962 -90092326 + AT_rich Low_complexity Low_complexity 1 51 0 317 206 15 0 chr10 55497202 55497270 -90092018 + LTR41 LTR ERVL 94 162 -611 355 190 14 42 chr10 55497768 55497869 -90091419 + LTR41 LTR ERVL 689 793 -2 1280 273 55 49 chr10 55499711 55500243 -90089045 + MER90 LTR ERV1 80 614 0 331 268 10 0 chr10 55500584 55500681 -90088607 - MIR SINE MIR -117 145 48 2194 71 7 52 chr10 55500817 55501125 -90088163 - AluY SINE Alu -17 294 1 267 298 39 45 chr10 55504463 55504641 -90084647 + L1ME LINE L1 3 179 -5891 940 311 80 26 chr10 55504728 55505586 -90083702 + L1ME LINE L1 3377 4281 -1799 587 267 87 85 chr10 55505587 55506638 -90082650 + L1ME LINE L1 4454 5509 -595 997 256 22 4 chr10 55507612 55507842 -90081446 + MER70A LTR ERVL 1 234 -238 360 226 71 64 chr10 55508090 55508298 -90080990 - MLT1J2 LTR MaLR -240 206 1 1667 322 42 20 chr10 55508321 55509197 -90080091 - L2 LINE L2 -1535 1779 885 1089 217 105 101 chr10 55511450 55511783 -90077505 - MLT1D LTR MaLR 0 505 166 1422 225 16 32 chr10 55511783 55512152 -90077136 + MLT1A1 LTR MaLR 1 363 -2 1089 217 105 101 chr10 55512152 55512319 -90076969 - MLT1D LTR MaLR -339 166 1 207 0 0 0 chr10 55513889 55513912 -90075376 + (TC)n Simple_repeat Simple_repeat 2 24 0 1083 156 11 6 chr10 55514015 55514194 -90075094 - MLT1C LTR MaLR 0 467 288 1037 216 30 22 chr10 55514339 55514608 -90074680 - MLT1C LTR MaLR -170 297 27 460 214 84 51 chr10 55514743 55514921 -90074367 - L1M4 LINE L1 -840 5306 5123 664 167 95 14 chr10 55515099 55515309 -90073979 - L1M4 LINE L1 -2800 3346 3120 3562 274 80 38 chr10 55515383 55515986 -90073302 + L1ME3 LINE L1 2669 3245 -2917 2031 133 0 34 chr10 55515986 55516309 -90072979 + AluSx SINE Alu 1 312 0 3562 274 80 38 chr10 55516309 55519055 -90070233 + L1ME3 LINE L1 3245 6161 -1 26 0 0 0 chr10 55519324 55519350 -90069938 + AT_rich Low_complexity Low_complexity 1 26 0 212 139 0 23 chr10 55519355 55519398 -90069890 + (CTA)n Simple_repeat Simple_repeat 2 43 0 839 151 87 0 chr10 55520007 55520179 -90069109 - MER53 DNA DNA -2 187 1 285 307 0 10 chr10 55520412 55520513 -90068775 + MIR SINE MIR 28 127 -135 209 164 0 36 chr10 55521144 55521199 -90068089 + T-rich Low_complexity Low_complexity 4 56 0 1269 224 134 24 chr10 55521268 55521713 -90067575 + MLT1H LTR MaLR 1 534 -15 248 73 146 0 chr10 55522329 55522370 -90066918 + LTR32 LTR ERVL 3 49 -422 1138 171 66 13 chr10 55522370 55522598 -90066690 + LTR32 LTR ERVL 232 471 0 227 300 0 12 chr10 55524499 55524579 -90064709 + (CA)n Simple_repeat Simple_repeat 2 80 0 249 332 135 15 chr10 55524586 55524845 -90064443 + L2 LINE L2 2876 3165 -148 791 229 47 21 chr10 55524856 55525092 -90064196 - L1MB4 LINE L1 0 6180 5939 2455 86 0 3 chr10 55525229 55525532 -90063756 + AluSx SINE Alu 1 302 -10 900 277 31 28 chr10 55528055 55528376 -90060912 + MER90 LTR ERV1 284 605 -9 2558 94 17 0 chr10 55529497 55529848 -90059440 + L1PA10 LINE L1 5807 6163 -5 255 214 0 0 chr10 55529907 55529963 -90059325 - MER90 LTR ERV1 -184 430 375 3019 118 12 0 chr10 55529974 55530398 -90058890 - MER57B LTR ERV1 -5 429 1 341 282 18 9 chr10 55530402 55530512 -90058776 - MER90 LTR ERV1 -256 319 209 357 311 81 20 chr10 55530547 55530843 -90058445 - L1M4 LINE L1 -2027 4119 3806 1023 211 74 13 chr10 55532195 55532494 -90056794 - MER33 DNA MER1_type -4 320 4 1557 209 70 5 chr10 55532537 55532910 -90056378 + MLT2C1 LTR ERVL 1 397 0 2068 125 16 13 chr10 55533089 55533400 -90055888 + AluSx SINE Alu 1 312 0 243 257 0 0 chr10 55534740 55534810 -90054478 - L2 LINE L2 -320 2952 2883 201 309 32 32 chr10 55535806 55535900 -90053388 + MIR SINE MIR 61 154 -108 779 305 33 22 chr10 55536939 55537300 -90051988 - MER90 LTR ERV1 -2 612 248 1590 237 70 48 chr10 55537376 55538186 -90051102 - L1M4 LINE L1 -2456 3690 2863 383 241 69 9 chr10 55538198 55538314 -90050974 - L1MEc LINE L1 -5664 732 610 708 322 49 0 chr10 55538495 55538781 -90050507 - L1MEc LINE L1 -6003 393 94 23 0 0 0 chr10 55539034 55539057 -90050231 + AT_rich Low_complexity Low_complexity 1 23 0 44957 36 4 7 chr10 55539150 55545322 -90043966 + L1PA3 LINE L1 3 6154 -1 185 0 0 39 chr10 55545415 55545441 -90043847 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 1120 190 35 0 chr10 55545478 55545678 -90043610 - AluJb SINE Alu -20 292 86 436 287 153 19 chr10 55546668 55546825 -90042463 + MER5A DNA MER1_type 9 186 -3 1658 220 45 99 chr10 55546826 55547700 -90041588 - L1MC5 LINE L1 -522 7439 6614 700 69 0 3 chr10 55547985 55548217 -90041071 + AluY SINE Alu 1 303 -8 2685 86 0 0 chr10 55548453 55548814 -90040474 - L1PB1 LINE L1 0 6867 6507 288 198 30 20 chr10 55548815 55548916 -90040372 + (TA)n Simple_repeat Simple_repeat 1 102 0 4531 170 15 3 chr10 55548921 55550338 -90038950 - L1PB1 LINE L1 -360 6507 5072 7571 129 156 7 chr10 55550344 55551721 -90037567 - L1PB1 LINE L1 -4646 2217 636 991 177 15 5 chr10 55551723 55551921 -90037367 - L1PB1 LINE L1 -6663 200 1 30 19 0 39 chr10 55552292 55552317 -90036971 + AT_rich Low_complexity Low_complexity 1 25 -25 1554 186 25 14 chr10 55552317 55552497 -90036791 - AluJb SINE Alu 0 305 119 186 43 0 0 chr10 55552497 55552520 -90036768 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 1554 186 25 14 chr10 55552520 55552641 -90036647 - AluJb SINE Alu -186 119 1 30 19 0 39 chr10 55552641 55552666 -90036622 + AT_rich Low_complexity Low_complexity 25 50 0 2163 170 33 21 chr10 55552698 55553121 -90036167 + MSTA LTR MaLR 1 428 0 4608 152 24 35 chr10 55553163 55554058 -90035230 - L1MB1 LINE L1 0 6168 5284 853 258 15 15 chr10 55554057 55554321 -90034967 + L1 LINE L1 5081 5344 -802 * 237 277 62 0 chr10 55554416 55554481 -90034807 + MIR3 SINE MIR 125 193 -15 678 274 104 63 chr10 55554494 55555054 -90034234 + MLT1H1 LTR MaLR 1 555 0 6398 73 7 6 chr10 55555515 55555535 -90033753 - L1PA10 LINE L1 -2 6166 6148 2208 111 3 0 chr10 55555535 55555833 -90033455 + AluSp SINE Alu 1 299 -14 6398 73 7 6 chr10 55555833 55557275 -90032013 - L1PA10 LINE L1 -20 6148 4692 2238 125 12 0 chr10 55558398 55558742 -90030546 - L1PA15 LINE L1 -5 6160 5813 421 252 67 15 chr10 55559718 55559853 -90029435 - MIR SINE MIR -94 168 27 1340 86 0 0 chr10 55560037 55560212 -90029076 - AluY SINE Alu -4 307 133 22 70 0 0 chr10 55560540 55560583 -90028705 + AT_rich Low_complexity Low_complexity 1 43 0 9022 221 72 28 chr10 55561052 55562476 -90026812 + L1MDa LINE L1 16 1376 -5164 2224 111 0 0 chr10 55562476 55562773 -90026515 + AluY SINE Alu 1 297 -14 9022 221 72 28 chr10 55562773 55563793 -90025495 + L1MDa LINE L1 1376 2643 -3897 2164 120 0 7 chr10 55563793 55564093 -90025195 + AluSg SINE Alu 3 300 -10 9022 221 72 28 chr10 55564093 55564744 -90024544 + L1MDa LINE L1 2643 3264 -3276 263 28 28 0 chr10 55564948 55564984 -90024304 + (TA)n Simple_repeat Simple_repeat 2 38 0 2043 132 3 3 chr10 55564987 55565275 -90024013 + AluSx SINE Alu 3 290 -22 26 30 0 0 chr10 55565275 55565308 -90023980 + AT_rich Low_complexity Low_complexity 1 33 0 601 317 63 78 chr10 55565309 55565450 -90023838 - L2 LINE L2 -2 3311 3169 210 71 0 0 chr10 55565450 55565478 -90023810 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 601 317 63 78 chr10 55565478 55565825 -90023463 - L2 LINE L2 -144 3169 2830 * 775 272 132 12 chr10 55565822 55565837 -90023451 - L2 LINE L2 -423 2891 2879 1891 164 0 0 chr10 55565837 55566124 -90023164 + AluSq SINE Alu 21 307 -6 775 272 132 12 chr10 55566124 55566435 -90022853 - L2 LINE L2 -435 2879 2526 297 352 102 11 chr10 55567222 55567398 -90021890 - L2 LINE L2 -6 3307 3116 420 294 86 30 chr10 55567705 55567948 -90021340 + MIR SINE MIR 4 255 -7 1847 158 42 9 chr10 55567969 55568305 -90020983 + MER7A DNA MER2_type 2 346 0 183 80 0 0 chr10 55569052 55569077 -90020211 + (CAAAAA)n Simple_repeat Simple_repeat 2 26 0 2119 131 0 0 chr10 55569443 55569740 -90019548 + AluSx SINE Alu 7 303 -9 219 319 32 11 chr10 55569784 55569878 -90019410 - MIR SINE MIR -70 192 97 471 219 0 10 chr10 55570197 55570293 -90018995 + L2 LINE L2 3219 3313 0 2501 56 0 10 chr10 55570381 55570687 -90018601 - AluY SINE Alu -8 303 1 22 35 0 0 chr10 55571042 55571071 -90018217 + AT_rich Low_complexity Low_complexity 1 29 0 45 50 0 30 chr10 55572988 55573087 -90016201 + AT_rich Low_complexity Low_complexity 1 96 0 698 165 16 71 chr10 55575051 55575233 -90014055 - L1MA9 LINE L1 -38 6274 6103 228 162 81 0 chr10 55575281 55575355 -90013933 + (TA)n Simple_repeat Simple_repeat 1 80 0 1031 203 19 10 chr10 55575663 55575870 -90013418 - MER2 DNA MER2_type -135 210 2 2163 132 0 0 chr10 55576746 55577050 -90012238 - AluSx SINE Alu -8 304 1 548 267 118 88 chr10 55577177 55577342 -90011946 + L1ME4a LINE L1 5644 5802 -319 1934 127 0 4 chr10 55577342 55577618 -90011670 + AluSx SINE Alu 1 275 -37 306 0 0 0 chr10 55577625 55577659 -90011629 + (TAAA)n Simple_repeat Simple_repeat 1 34 0 548 267 118 88 chr10 55577659 55577908 -90011380 + L1ME4a LINE L1 5807 6079 -42 368 281 160 38 chr10 55578013 55578276 -90011012 - L2 LINE L2 -3 3310 3016 2356 280 95 22 chr10 55578756 55579724 -90009564 + L2 LINE L2 1249 2287 -1027 904 292 120 40 chr10 55579743 55580293 -90008995 + L2 LINE L2 2695 3290 -23 741 176 59 64 chr10 55580293 55580480 -90008808 + MER5A DNA MER1_type 4 189 0 904 292 120 40 chr10 55580480 55580506 -90008782 + L2 LINE L2 3290 3312 -1 249 353 12 0 chr10 55580836 55580851 -90008437 - MER115 DNA AcHobo -607 86 73 2195 99 0 3 chr10 55580851 55581144 -90008144 - AluSc SINE Alu -17 292 1 249 353 12 0 chr10 55581144 55581213 -90008075 - MER115 DNA AcHobo -620 73 1 1463 207 82 68 chr10 55581351 55581849 -90007439 + MLT1D LTR MaLR 1 505 0 348 24 0 0 chr10 55582808 55582849 -90006439 + (GA)n Simple_repeat Simple_repeat 1 41 0 337 62 0 0 chr10 55582954 55583002 -90006286 - Alu SINE Alu -2 299 252 330 328 91 42 chr10 55583150 55583346 -90005942 - L1ME LINE L1 -484 5637 5419 2058 89 4 0 chr10 55583346 55583603 -90005685 + AluSp SINE Alu 1 258 -55 330 328 91 42 chr10 55583603 55583714 -90005574 - L1ME LINE L1 -702 5419 5315 2954 112 73 56 chr10 55584099 55584661 -90004627 + LTR10A LTR ERV1 1 617 -16 324 339 50 63 chr10 55584661 55584900 -90004388 + L2 LINE L2 3025 3260 -12 4059 151 57 37 chr10 55585056 55585925 -90003363 + MER4D LTR ERV1 1 664 0 2138 120 0 13 chr10 55586003 55586304 -90002984 + AluSx SINE Alu 3 299 -13 5128 187 71 14 chr10 55586309 55586907 -90002381 + Charlie5 DNA MER1_type 955 1518 -1106 1844 160 3 17 chr10 55586907 55587201 -90002087 + AluJo SINE Alu 3 292 -20 5128 187 71 14 chr10 55587201 55587891 -90001397 + Charlie5 DNA MER1_type 1518 2316 -308 413 266 31 31 chr10 55588492 55588620 -90000668 + MIR SINE MIR 13 140 -122 682 161 0 0 chr10 55588627 55588739 -90000549 - L1MA8 LINE L1 -397 5894 5783 204 313 45 0 chr10 55588746 55588813 -90000475 + MIR SINE MIR 156 225 -37 1851 203 29 95 chr10 55588897 55589440 -89999848 - L1MA9 LINE L1 -38 6274 5697 291 28 0 0 chr10 55589440 55589476 -89999812 + (CA)n Simple_repeat Simple_repeat 2 37 0 1851 203 29 95 chr10 55589476 55589659 -89999629 - L1MA9 LINE L1 -615 5697 5503 2029 134 0 20 chr10 55589659 55589964 -89999324 - AluSx SINE Alu -12 300 2 1851 203 29 95 chr10 55589964 55590000 -89999288 - L1MA9 LINE L1 -809 5503 5466 1974 134 52 0 chr10 55590000 55590291 -89998997 - AluSx SINE Alu -6 306 1 1851 203 29 95 chr10 55590291 55590616 -89998672 - L1MA9 LINE L1 -846 5466 5268 1464 207 20 82 chr10 55590656 55591269 -89998019 - L1MA9 LINE L1 -891 5255 4681 21 0 0 0 chr10 55692762 55692783 -89896505 + AT_rich Low_complexity Low_complexity 1 21 0 715 294 38 48 chr10 55692841 55693154 -89896134 + Charlie8 DNA MER1_type 118 427 -1990 243 0 0 0 chr10 55693549 55693576 -89895712 + (TG)n Simple_repeat Simple_repeat 2 28 0 1769 255 13 4 chr10 55694405 55694860 -89894428 + MER63C DNA MER1_type 49 507 -423 228 307 23 11 chr10 55694860 55694948 -89894340 + MIR SINE MIR 167 255 -7 913 238 55 53 chr10 55695040 55695502 -89893786 - MSTD LTR MaLR 0 396 15 468 322 82 6 chr10 55695517 55695700 -89893588 - MIR SINE MIR 0 262 66 23 105 0 0 chr10 55695759 55695845 -89893443 + AT_rich Low_complexity Low_complexity 1 86 0 289 269 13 0 chr10 55696318 55696467 -89892821 + (TA)n Simple_repeat Simple_repeat 2 152 0 1180 171 59 0 chr10 55696469 55696691 -89892597 - MER2 DNA MER2_type -1 344 110 192 152 0 0 chr10 55696721 55696754 -89892534 + (TG)n Simple_repeat Simple_repeat 2 34 0 1888 77 45 0 chr10 55696854 55697101 -89892187 + AluY SINE Alu 44 301 -10 239 275 18 46 chr10 55697236 55697345 -89891943 + CT-rich Low_complexity Low_complexity 5 110 0 342 211 53 0 chr10 55697472 55697544 -89891744 + MER112 DNA MER1_type 6 81 -179 1756 200 31 48 chr10 55697544 55697968 -89891320 - MLT1C LTR MaLR 0 467 37 1883 150 30 24 chr10 55697968 55698341 -89890947 + THE1C LTR MaLR 1 375 0 9681 121 57 7 chr10 55698343 55699845 -89889443 + THE1C-int LTR MaLR 4 1580 0 2007 137 27 27 chr10 55699845 55700218 -89889070 + THE1C LTR MaLR 1 373 -2 1756 200 31 48 chr10 55700218 55700265 -89889023 - MLT1C LTR MaLR -429 38 1 361 254 139 17 chr10 55700265 55700438 -89888850 + MER112 DNA MER1_type 67 260 0 293 259 62 0 chr10 55701736 55701817 -89887471 + MIR SINE MIR 15 100 -162 7149 55 6 3 chr10 55704660 55705576 -89883712 + L1PA8 LINE L1 5254 6171 -1 306 327 150 0 chr10 55706595 55706748 -89882540 + MIR SINE MIR 71 246 -16 23 33 0 0 chr10 55709433 55709463 -89879825 + AT_rich Low_complexity Low_complexity 1 30 0 23 54 0 0 chr10 55709534 55709571 -89879717 + AT_rich Low_complexity Low_complexity 1 37 0 460 286 24 0 chr10 55710488 55710614 -89878674 + L2 LINE L2 3175 3303 -10 1260 176 69 8 chr10 55710738 55710999 -89878289 - Tigger1 DNA MER2_type 0 2418 2142 11085 132 47 39 chr10 55711148 55711316 -89877972 - Tigger1 DNA MER2_type -270 2148 1983 1940 137 40 7 chr10 55711316 55711616 -89877672 - AluJb SINE Alu 0 312 3 11085 132 47 39 chr10 55711616 55712190 -89877098 - Tigger1 DNA MER2_type -435 1983 1415 2024 133 0 17 chr10 55712190 55712490 -89876798 + AluSx SINE Alu 1 295 -17 11085 132 47 39 chr10 55712490 55713851 -89875437 - Tigger1 DNA MER2_type -1003 1415 28 22 0 0 0 chr10 55714024 55714046 -89875242 + AT_rich Low_complexity Low_complexity 1 22 0 576 132 0 11 chr10 55714620 55714711 -89874577 - HY4 scRNA scRNA -3 90 1 183 320 27 0 chr10 55714803 55714878 -89874410 - MIR3 SINE MIR -5 203 127 11518 164 10 26 chr10 55715261 55717703 -89871585 + L1P3 LINE L1 3 2482 -3979 2260 85 0 0 chr10 55717703 55717986 -89871302 + AluY SINE Alu 1 283 -28 378 57 0 0 chr10 55717986 55718039 -89871249 + (CA)n Simple_repeat Simple_repeat 2 54 0 11518 164 10 26 chr10 55718039 55719166 -89870122 + L1P3 LINE L1 2480 3577 -2884 396 0 0 0 chr10 55720415 55720459 -89868829 + (TG)n Simple_repeat Simple_repeat 2 45 0 545 241 97 51 chr10 55720468 55720684 -89868604 + MIR SINE MIR 36 261 -1 476 364 0 0 chr10 55721094 55721281 -89868007 - MIR SINE MIR -26 236 50 254 343 65 0 chr10 55721570 55721678 -89867610 + L2 LINE L2 3158 3272 0 3583 152 36 6 chr10 55722401 55723085 -89866203 + MER67C LTR ERV1 1 705 -5 379 219 128 113 chr10 55723227 55723624 -89865664 - MER57A LTR ERV1 0 403 1 1512 120 174 0 chr10 55723634 55723876 -89865412 + AluSg SINE Alu 1 284 -26 183 146 0 0 chr10 55723876 55723917 -89865371 + (TA)n Simple_repeat Simple_repeat 1 41 0 848 176 64 11 chr10 55723997 55724185 -89865103 + Tigger3(Golem) DNA MER2_type 2832 3029 0 315 317 56 21 chr10 55724185 55724327 -89864961 + L2 LINE L2 2621 2767 -547 31671 81 5 9 chr10 55724556 55729175 -89860113 - L1P LINE L1 -869 5277 678 1763 185 0 3 chr10 55729214 55729539 -89859749 - L1P3 LINE L1 -6128 333 10 7798 121 7 2 chr10 55729551 55730819 -89858469 - L1P LINE L1 -1502 4644 3370 6098 64 5 2 chr10 55730919 55731713 -89857575 + L1PA6 LINE L1 5357 6152 -2 188 311 67 33 chr10 55732104 55732194 -89857094 + L2 LINE L2 3136 3228 -44 6478 75 8 5 chr10 55732501 55733899 -89855389 + L1PA8A LINE L1 4730 6130 -1 918 217 105 48 chr10 55734820 55735193 -89854095 - LTR37A LTR ERV1 -28 398 5 21 0 0 0 chr10 55735907 55735928 -89853360 + AT_rich Low_complexity Low_complexity 1 21 0 2445 173 15 2 chr10 55736761 55737241 -89852047 - L1MA4 LINE L1 -18 6282 5797 473 162 16 66 chr10 55737242 55737616 -89851672 + (TA)n Simple_repeat Simple_repeat 1 355 0 230 136 53 68 chr10 55737583 55737715 -89851573 + (ATATG)n Simple_repeat Simple_repeat 2 131 0 * 302 282 26 34 chr10 55739807 55739924 -89849364 - L1ME4a LINE L1 -2 6119 6004 1757 237 109 15 chr10 55740026 55740613 -89848675 - LTR48B LTR ERV1 -2 642 1 1791 274 107 37 chr10 55741431 55742462 -89846826 - L2 LINE L2 0 3313 2223 1401 275 54 9 chr10 55742472 55742524 -89846764 - MLT1J LTR MaLR 0 511 463 1765 144 0 0 chr10 55742524 55742780 -89846508 - AluSx SINE Alu -17 295 40 1401 275 54 9 chr10 55742780 55743174 -89846114 - MLT1J LTR MaLR -48 463 45 480 243 111 107 chr10 55743344 55743882 -89845406 - MLT1H1 LTR MaLR -7 548 3 380 284 130 32 chr10 55744086 55744316 -89844972 - MIR SINE MIR -6 256 4 339 282 0 0 chr10 55745193 55745278 -89844010 - HERV16 LTR ERVL -4831 165 81 24 0 0 0 chr10 55745300 55745324 -89843964 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr10 55745576 55745599 -89843689 + AT_rich Low_complexity Low_complexity 1 23 0 14233 182 32 17 chr10 55746593 55747606 -89841682 + L1M1 LINE L1 60 1056 -6663 393 22 0 0 chr10 55747606 55747652 -89841636 + (CA)n Simple_repeat Simple_repeat 1 46 0 14233 182 32 17 chr10 55747652 55751048 -89838240 + L1M1 LINE L1 1056 5353 -2366 2015 139 3 19 chr10 55751048 55751365 -89837923 + AluSx SINE Alu 1 312 0 14233 182 32 17 chr10 55751365 55753250 -89836038 + L1M1 LINE L1 5353 7208 -511 591 158 4 36 chr10 55753252 55753719 -89835569 + (TA)n Simple_repeat Simple_repeat 1 452 0 633 99 0 62 chr10 55753739 55753931 -89835357 + (TA)n Simple_repeat Simple_repeat 1 180 0 738 41 74 33 chr10 55753936 55754206 -89835082 + (CATAT)n Simple_repeat Simple_repeat 1 281 0 362 107 82 19 chr10 55754261 55754420 -89834868 + (CATAT)n Simple_repeat Simple_repeat 2 170 0 2501 45 3 3 chr10 55754930 55755240 -89834048 - AluSx SINE Alu -2 310 1 247 150 0 0 chr10 55755495 55755535 -89833753 - MER45 DNA AcHobo -7 1574 1535 325 232 80 24 chr10 55755562 55755687 -89833601 - MER45 DNA AcHobo -814 139 8 286 317 55 40 chr10 55756322 55756521 -89832767 - MIR SINE MIR -55 207 6 485 289 147 18 chr10 55756933 55757206 -89832082 - L2 LINE L2 -1 3312 3005 2093 68 32 7 chr10 55758600 55758878 -89830410 - AluY SINE Alu -26 285 1 1328 44 0 0 chr10 55759037 55759195 -89830093 - AluY SINE Alu 0 311 154 306 0 0 0 chr10 55759245 55759279 -89830009 + (TTTG)n Simple_repeat Simple_repeat 1 34 0 774 212 7 65 chr10 55759659 55759927 -89829361 + MER52A LTR ERV1 1 344 -1411 4126 155 0 45 chr10 55759937 55760690 -89828598 + MER52A LTR ERV1 1037 1755 0 26 0 0 0 chr10 55761759 55761785 -89827503 + AT_rich Low_complexity Low_complexity 1 26 0 21 36 0 0 chr10 55762767 55762795 -89826493 + AT_rich Low_complexity Low_complexity 1 28 0 1098 272 43 66 chr10 55763589 55764317 -89824971 - L2 LINE L2 0 3313 2603 205 257 29 29 chr10 55765958 55766028 -89823260 + MIR SINE MIR 11 80 -182 842 324 149 44 chr10 55767121 55767501 -89821787 + L2 LINE L2 1909 2248 -1065 1692 145 22 11 chr10 55767501 55767777 -89821511 - AluJb SINE Alu -23 289 11 842 324 149 44 chr10 55767777 55768450 -89820838 + L2 LINE L2 2248 3066 -247 21 0 0 0 chr10 55769319 55769340 -89819948 + AT_rich Low_complexity Low_complexity 1 21 0 1262 155 0 5 chr10 55770257 55770470 -89818818 - MER6 DNA MER2_type 0 865 654 1667 173 123 13 chr10 55770487 55770868 -89818420 - LOR1b LTR ERV1 -38 423 1 1098 132 0 37 chr10 55770882 55771071 -89818217 - MER6 DNA MER2_type -214 651 470 495 294 61 36 chr10 55771075 55771354 -89817934 - MER34 LTR ERV1 0 542 257 365 319 24 6 chr10 55771484 55771653 -89817635 - MER34 LTR ERV1 -370 172 1 2652 179 31 9 chr10 55771653 55772110 -89817178 - MER6 DNA MER2_type -398 467 1 1928 155 26 0 chr10 55772618 55772922 -89816366 + AluSx SINE Alu 1 312 0 186 224 0 61 chr10 55774986 55775035 -89814253 + MIR SINE MIR 217 262 0 539 211 130 0 chr10 55775149 55775272 -89814016 + MLT1C LTR MaLR 66 204 -263 23 0 0 0 chr10 55775360 55775383 -89813905 + AT_rich Low_complexity Low_complexity 1 23 0 205 345 23 40 chr10 55775391 55775565 -89813723 - MIR SINE MIR -15 247 77 1670 165 35 3 chr10 55776509 55776794 -89812494 - MER41E LTR ERV1 0 512 219 429 164 0 0 chr10 55776800 55776873 -89812415 - LTR23 LTR ERV1 -349 88 16 2109 107 0 13 chr10 55776909 55777244 -89812044 - AluSx SINE Alu 0 347 17 434 111 14 0 chr10 55777247 55777319 -89811969 - LTR23 LTR ERV1 -364 73 1 2199 114 3 0 chr10 55777525 55777822 -89811466 - AluSx SINE Alu -14 298 1 361 221 35 0 chr10 55778643 55778729 -89810559 + MER103 DNA DNA 10 98 -68 359 307 59 35 chr10 55778741 55778906 -89810382 - MIR SINE MIR 0 262 90 1944 162 120 3 chr10 55778906 55779288 -89810000 - MSTA LTR MaLR 0 428 2 359 307 59 35 chr10 55779288 55779324 -89809964 - MIR SINE MIR -172 90 56 370 281 109 20 chr10 55779873 55780142 -89809146 + L1ME LINE L1 5335 5633 -488 513 329 88 15 chr10 55780332 55780606 -89808682 + MLT1I LTR MaLR 98 391 -18 3321 204 62 46 chr10 55780813 55781653 -89807635 - L1MB5 LINE L1 0 6174 5322 763 147 7 22 chr10 55781663 55781799 -89807489 - FLAM_C SINE Alu -9 134 1 342 339 27 22 chr10 55781822 55782005 -89807283 - L1M4 LINE L1 -6009 533 350 1974 114 4 0 chr10 55782458 55782729 -89806559 + AluSg SINE Alu 25 296 -14 363 145 0 43 chr10 55782971 55783040 -89806248 + L1MA9 LINE L1 5941 6006 -306 1366 184 8 32 chr10 55783059 55783142 -89806146 + AluJo SINE Alu 41 124 -187 267 31 0 0 chr10 55783142 55783174 -89806114 + (CAA)n Simple_repeat Simple_repeat 2 33 0 1366 184 8 32 chr10 55783174 55783367 -89805921 + AluJo SINE Alu 124 311 0 23 33 0 0 chr10 55783654 55783684 -89805604 + AT_rich Low_complexity Low_complexity 1 30 0 231 280 54 0 chr10 55784285 55784378 -89804910 - MIR3 SINE MIR -7 201 104 273 340 152 49 chr10 55784667 55785173 -89804115 + L3 LINE CR1 547 1104 -473 201 294 108 20 chr10 55785336 55785438 -89803850 + L3 LINE CR1 1139 1249 -328 295 276 253 24 chr10 55786447 55786617 -89802671 + L3 LINE CR1 1368 1576 -1 406 259 36 36 chr10 55787711 55787850 -89801438 + MIR SINE MIR 103 241 -21 218 333 48 29 chr10 55787941 55788046 -89801242 + MIR3 SINE MIR 12 118 -90 280 286 54 27 chr10 55788647 55788759 -89800529 - MIR SINE MIR -21 241 127 241 339 72 50 chr10 55789555 55789735 -89799553 + MIR3 SINE MIR 16 199 -9 442 280 19 34 chr10 55790060 55790089 -89799199 - MIR SINE MIR -80 128 100 1825 168 50 34 chr10 55790089 55790469 -89798819 + MLT1B LTR MaLR 5 390 0 442 280 19 34 chr10 55790469 55790598 -89798690 - MIR SINE MIR -108 100 20 650 293 65 16 chr10 55790746 55790992 -89798296 + MIR SINE MIR 3 260 -2 3643 160 28 9 chr10 55791695 55792375 -89796913 - L1MA8 LINE L1 -36 6255 5563 22 0 0 0 chr10 55792482 55792504 -89796784 + AT_rich Low_complexity Low_complexity 1 22 0 1700 282 58 24 chr10 55792604 55793143 -89796145 - L1M4b LINE L1 -6292 567 11 238 319 188 13 chr10 55793164 55793393 -89795895 + L3 LINE CR1 1099 1367 -210 197 333 22 0 chr10 55793562 55793652 -89795636 - L2 LINE L2 -671 2643 2552 2137 123 26 47 chr10 55795336 55795719 -89793569 + THE1C LTR MaLR 1 375 0 2888 161 72 24 chr10 55796330 55796909 -89792379 - L1PA14 LINE L1 -5 6156 5550 435 306 114 54 chr10 55797189 55797345 -89791943 - MLT1I LTR MaLR 0 409 264 2308 101 0 0 chr10 55797345 55797642 -89791646 + AluSg SINE Alu 1 297 -13 435 306 114 54 chr10 55797642 55797818 -89791470 - MLT1I LTR MaLR -145 264 57 1336 181 13 13 chr10 55797821 55798059 -89791229 - LTR32 LTR ERVL 0 471 234 306 151 38 0 chr10 55798080 55798133 -89791155 - LTR32 LTR ERVL -406 65 11 209 250 185 0 chr10 55800054 55800146 -89789142 + MIR SINE MIR 128 236 -26 210 303 45 0 chr10 55800160 55800226 -89789062 + L2 LINE L2 3204 3272 0 256 370 37 31 chr10 55800373 55800535 -89788753 + MIR3 SINE MIR 15 177 -31 274 300 108 105 chr10 55800966 55801289 -89787999 - MLT1J2 LTR MaLR -120 330 7 750 174 25 0 chr10 55801289 55801410 -89787878 + AluJb SINE Alu 2 125 -187 694 188 22 83 chr10 55802117 55802298 -89786990 - MLT1B LTR MaLR -16 374 205 538 216 162 14 chr10 55802361 55802509 -89786779 - MLT1B LTR MaLR -204 170 1 1552 195 26 0 chr10 55805267 55805416 -89783872 - AluJb SINE Alu -33 279 118 234 0 0 0 chr10 55805416 55805442 -89783846 + (TTA)n Simple_repeat Simple_repeat 2 27 0 1552 195 26 0 chr10 55805442 55805564 -89783724 - AluJb SINE Alu -194 118 1 23 0 0 0 chr10 55806460 55806483 -89782805 + AT_rich Low_complexity Low_complexity 1 23 0 1323 269 52 58 chr10 55806950 55807160 -89782128 - L2 LINE L2 -51 3262 3052 749 188 8 15 chr10 55807160 55807293 -89781995 + FLAM_C SINE Alu 1 132 -1 1323 269 52 58 chr10 55807293 55807309 -89781979 - L2 LINE L2 -261 3052 3037 1274 140 50 146 chr10 55807309 55807630 -89781658 + AluJb SINE Alu 1 290 -12 1323 269 52 58 chr10 55807630 55808228 -89781060 - L2 LINE L2 -276 3037 2445 404 271 61 22 chr10 55808231 55808412 -89780876 + L1ME2 LINE L1 5672 5859 -305 769 98 23 30 chr10 55808447 55808579 -89780709 - L1MA2 LINE L1 0 6304 6174 2235 254 44 41 chr10 55808668 55809346 -89779942 - L1ME2 LINE L1 0 6164 5476 2349 97 0 0 chr10 55809346 55809644 -89779644 - AluSx SINE Alu -14 298 1 2235 254 44 41 chr10 55809644 55809947 -89779341 - L1ME2 LINE L1 -688 5476 5175 4053 129 67 71 chr10 55809990 55810778 -89778510 + LTR1 LTR ERV1 1 785 0 2243 90 10 0 chr10 55810921 55811222 -89778066 + AluSc SINE Alu 1 304 -5 1199 215 102 0 chr10 55811254 55811510 -89777778 + HUERS-P2 LTR ERV1 244 525 -2563 459 98 0 37 chr10 55811510 55811592 -89777696 + LTR1 LTR ERV1 707 785 0 1262 255 62 53 chr10 55811732 55812446 -89776842 - L1ME2 LINE L1 -1140 5006 4287 31 26 0 0 chr10 55812484 55812522 -89776766 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 54 chr10 55812862 55812883 -89776405 + AT_rich Low_complexity Low_complexity 1 21 -14 2058 107 3 45 chr10 55812883 55813192 -89776096 + AluSx SINE Alu 1 296 -16 22 0 0 54 chr10 55813192 55813207 -89776081 + AT_rich Low_complexity Low_complexity 21 35 0 499 285 100 20 chr10 55814702 55814902 -89774386 - MIR SINE MIR 0 262 47 284 296 187 12 chr10 55815176 55815578 -89773710 - L1ME2 LINE L1 -2982 3164 2693 989 208 12 154 chr10 55815656 55815740 -89773548 - MLT1D LTR MaLR -1 504 410 5059 46 14 0 chr10 55815740 55816323 -89772965 + LTR10C LTR ERV1 1 591 0 989 208 12 154 chr10 55816323 55816641 -89772647 - MLT1D LTR MaLR -95 410 159 2781 141 118 31 chr10 55816644 55817163 -89772125 - LTR6A LTR ERV1 0 564 1 46810 206 26 3 chr10 55817163 55825841 -89763447 - HERVS71 LTR ERV1 -69 8909 4 2796 151 109 29 chr10 55825844 55826366 -89762922 - LTR6A LTR ERV1 0 564 1 505 250 6 80 chr10 55826367 55826543 -89762745 - MLT1D LTR MaLR -463 163 1 2107 226 54 50 chr10 55826648 55827245 -89762043 + MER77 LTR ERV1 1 599 -6 451 254 51 0 chr10 55828218 55828336 -89760952 - MLT1J2 LTR MaLR -307 143 20 2056 112 3 7 chr10 55828443 55828728 -89760560 - AluSc SINE Alu -25 284 1 341 201 173 20 chr10 55828734 55828881 -89760407 - MIR SINE MIR -78 184 20 189 115 0 0 chr10 55829735 55829761 -89759527 - L2 LINE L2 -26 3287 3262 1334 297 28 8 chr10 55830662 55831059 -89758229 - MLT1I LTR MaLR -4 405 1 2142 196 5 12 chr10 55831598 55831997 -89757291 + MER57A LTR ERV1 8 403 0 1997 132 3 20 chr10 55832807 55833111 -89756177 - AluSx SINE Alu -13 299 1 931 225 46 4 chr10 55833138 55833378 -89755910 - L1MA9 LINE L1 -38 6274 6025 1508 180 114 113 chr10 55833380 55833974 -89755314 - LTR49 LTR ERV1 0 595 1 1747 179 4 0 chr10 55834170 55834449 -89754839 + AluJb SINE Alu 1 280 -32 257 241 0 0 chr10 55834495 55834549 -89754739 - MIR SINE MIR -63 145 92 2045 207 104 21 chr10 55834662 55834675 -89754613 + LTR48B LTR ERV1 21 31 -613 7815 183 106 44 chr10 55834675 55836328 -89752960 - MER52A LTR ERV1 0 1755 1 2045 207 104 21 chr10 55836328 55836889 -89752399 + LTR48B LTR ERV1 31 643 -1 4722 160 43 39 chr10 55837438 55838336 -89750952 - MER4D LTR ERV1 0 903 2 1957 135 74 11 chr10 55838392 55838941 -89750347 + LTR24C LTR ERV1 7 633 -2 2099 152 14 22 chr10 55839279 55839641 -89749647 - L1PA16 LINE L1 -2 6164 5806 21 36 0 0 chr10 55839641 55839669 -89749619 + AT_rich Low_complexity Low_complexity 1 28 0 2018 155 57 49 chr10 55839743 55840028 -89749260 + LTR23 LTR ERV1 3 293 -144 748 195 31 0 chr10 55840028 55840156 -89749132 - FLAM_C SINE Alu 0 133 2 2018 155 57 49 chr10 55840156 55840295 -89748993 + LTR23 LTR ERV1 293 430 -7 206 240 0 40 chr10 55840309 55840359 -89748929 + MIR SINE MIR 215 262 0 693 133 123 79 chr10 55840961 55840986 -89748302 - MER34C LTR ERV1 -2 583 561 1458 206 11 4 chr10 55840986 55841294 -89747994 + AluJb SINE Alu 1 310 0 693 133 123 79 chr10 55841294 55841398 -89747890 - MER34C LTR ERV1 -24 561 438 3829 168 57 36 chr10 55841398 55842101 -89747187 + MER72 LTR ERV1 5 722 0 693 133 123 79 chr10 55842101 55842172 -89747116 - MER34C LTR ERV1 -147 438 372 263 176 88 15 chr10 55842178 55842246 -89747042 + MER101B LTR ERV1 1 73 -497 971 257 101 3 chr10 55842500 55842788 -89746500 + LTR51 LTR ERV1 230 545 -126 2029 165 99 10 chr10 55842789 55843201 -89746087 - LTR47A LTR ERVL -1 451 3 999 215 4 77 chr10 55843202 55843449 -89745839 - MER4B-int LTR ERV1 -681 6077 5849 675 136 163 76 chr10 55843472 55843680 -89745608 - MER4B-int LTR ERV1 -436 6146 4568 848 223 23 127 chr10 55843887 55844357 -89744931 - LTR28 LTR ERV1 -41 894 1 5203 118 38 5 chr10 55844357 55845112 -89744176 - LTR28-int LTR ERV1 0 7091 6312 1773 188 0 3 chr10 55845322 55845626 -89743662 - AluJb SINE Alu -9 303 1 1673 201 3 6 chr10 55846610 55846923 -89742365 - AluJo SINE Alu 0 312 1 1814 159 131 52 chr10 55847042 55847469 -89741819 + LOR1b LTR ERV1 1 461 0 245 255 21 113 chr10 55847744 55847885 -89741403 + LTR35 LTR ERV1 1 128 -490 575 255 35 49 chr10 55848031 55848373 -89740915 + LTR35 LTR ERV1 346 617 -1 814 274 89 34 chr10 55849010 55849540 -89739748 - HAL1 LINE L1 -6 2501 1943 194 225 0 14 chr10 55849556 55849627 -89739661 + CT-rich Low_complexity Low_complexity 3 72 0 24 32 0 0 chr10 55849846 55849877 -89739411 + AT_rich Low_complexity Low_complexity 1 31 0 464 220 8 42 chr10 55849884 55850002 -89739286 - HAL1 LINE L1 -935 1572 1459 * 5177 230 62 36 chr10 55849994 55850748 -89738540 - L1MB7 LINE L1 -301 5883 5150 1341 181 150 0 chr10 55850748 55851008 -89738280 + AluJo SINE Alu 2 300 -2 5177 230 62 36 chr10 55851008 55852362 -89736926 - L1MB7 LINE L1 -1034 5150 3745 2091 139 3 0 chr10 55852362 55852665 -89736623 + AluSx SINE Alu 1 304 -8 5177 230 62 36 chr10 55852665 55852816 -89736472 - L1MB7 LINE L1 -2439 3745 3599 325 284 0 0 chr10 55852819 55852893 -89736395 - HAL1 LINE L1 -1261 1246 1173 3946 169 52 35 chr10 55852902 55853580 -89735708 - L1MB3 LINE L1 0 6183 5479 1644 174 3 24 chr10 55853580 55853878 -89735410 - AluJb SINE Alu -13 299 8 3946 169 52 35 chr10 55853878 55854084 -89735204 - L1MB3 LINE L1 -704 5479 5278 329 316 99 76 chr10 55854302 55854565 -89734723 - HAL1 LINE L1 -1606 901 633 274 357 145 20 chr10 55854577 55854826 -89734462 - HAL1 LINE L1 -1866 641 362 219 357 53 71 chr10 55855111 55855545 -89733743 + L2 LINE L2 2827 3252 -61 27 81 0 0 chr10 55855793 55855855 -89733433 + AT_rich Low_complexity Low_complexity 1 62 0 21 36 0 0 chr10 55855994 55856022 -89733266 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr10 55856211 55856235 -89733053 + AT_rich Low_complexity Low_complexity 1 24 0 2138 108 0 3 chr10 55856992 55857289 -89731999 + AluSg SINE Alu 1 296 -14 640 173 43 36 chr10 55857443 55857582 -89731706 - FLAM_C SINE Alu -1 142 3 435 273 113 103 chr10 55857709 55858215 -89731073 - L1ME4a LINE L1 -90 6031 5521 1633 178 14 17 chr10 55858413 55858706 -89730582 - AluJb SINE Alu -20 292 1 28 29 0 0 chr10 55858794 55858829 -89730459 + AT_rich Low_complexity Low_complexity 1 35 0 193 321 82 22 chr10 55858930 55859064 -89730224 + L2 LINE L2 2915 3056 -216 234 0 0 0 chr10 55859942 55859968 -89729320 + (TTTA)n Simple_repeat Simple_repeat 4 29 0 630 272 89 0 chr10 55860487 55860689 -89728599 - MER58A DNA MER1_type 0 224 5 2135 172 52 7 chr10 55860856 55861264 -89728024 - MSTB LTR MaLR 0 426 1 226 186 0 68 chr10 55861279 55861338 -89727950 - Charlie8 DNA MER1_type -2026 391 337 27 29 0 0 chr10 55861468 55861502 -89727786 + AT_rich Low_complexity Low_complexity 1 34 0 23 0 0 0 chr10 55861974 55861997 -89727291 + AT_rich Low_complexity Low_complexity 1 23 0 2176 111 0 0 chr10 55862040 55862329 -89726959 + AluSx SINE Alu 1 289 -23 716 186 203 6 chr10 55863961 55864138 -89725150 + MER31A LTR ERV1 1 212 -273 265 116 93 0 chr10 55864294 55864337 -89724951 + MER53 DNA DNA 1 47 -142 603 259 20 0 chr10 55865730 55865877 -89723411 + L1M4c LINE L1 12 161 -5794 840 156 0 16 chr10 55865877 55866005 -89723283 + FLAM_C SINE Alu 1 126 -17 213 39 0 0 chr10 55866006 55866032 -89723256 + (CA)n Simple_repeat Simple_repeat 2 27 0 1029 333 81 23 chr10 55866047 55867019 -89722269 + L1M4c LINE L1 166 882 -5073 2179 250 122 25 chr10 55867038 55868596 -89720692 + L1M4c LINE L1 828 2534 -3500 2388 210 148 21 chr10 55868628 55869432 -89719856 + L1M4c LINE L1 2667 3572 -2462 1715 174 50 42 chr10 55870173 55870575 -89718713 + L1MA9 LINE L1 5336 5740 -572 364 182 39 0 chr10 55870572 55870649 -89718639 + L1MA9 LINE L1 5946 6025 -287 * 246 211 105 35 chr10 55870880 55870937 -89718351 - tRNA-Arg-AGA tRNA tRNA -13 63 3 296 305 16 62 chr10 55872164 55872292 -89716996 - MIR SINE MIR -71 137 16 506 275 61 18 chr10 55872323 55872521 -89716767 + MIR SINE MIR 57 262 0 1703 185 0 4 chr10 55872719 55873000 -89716288 - AluJb SINE Alu -32 280 1 253 237 0 93 chr10 55873023 55873120 -89716168 - L1MA6 LINE L1 -6 6294 6207 1439 103 27 9 chr10 55873145 55873368 -89715920 + MER30 DNA MER1_type 1 227 -3 416 323 181 9 chr10 55873368 55873594 -89715694 - MLT1J2 LTR MaLR -173 277 13 2502 153 33 31 chr10 55874713 55874946 -89714342 - MER31A LTR ERV1 0 485 254 2083 209 22 17 chr10 55874946 55875405 -89713883 - MER65C LTR ERV1 0 461 1 2502 153 33 31 chr10 55875405 55875655 -89713633 - MER31A LTR ERV1 -231 254 1 203 161 0 0 chr10 55875818 55875849 -89713439 + T-rich Low_complexity Low_complexity 5 35 0 497 208 208 0 chr10 55876151 55876305 -89712983 - MER53 DNA DNA -3 186 1 3006 128 108 7 chr10 55876982 55877559 -89711729 - LTR24C LTR ERV1 0 635 1 1458 90 0 0 chr10 55878419 55878608 -89710680 - AluY SINE Alu -19 292 104 1644 190 98 62 chr10 55878668 55879065 -89710223 - LTR29 LTR ERV1 0 622 204 1875 131 183 14 chr10 55879065 55879431 -89709857 - MSTA LTR MaLR 0 428 1 1644 190 98 62 chr10 55879431 55879502 -89709786 - LTR29 LTR ERV1 -418 204 137 334 292 0 0 chr10 55879507 55879603 -89709685 - MER34 LTR ERV1 -446 96 1 183 42 0 0 chr10 55879970 55879994 -89709294 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 22 0 0 0 chr10 55880141 55880163 -89709125 + AT_rich Low_complexity Low_complexity 1 22 0 266 359 15 15 chr10 55881217 55881348 -89707940 + MIR SINE MIR 11 141 -121 345 261 34 0 chr10 55881604 55881692 -89707596 - L1M4 LINE L1 -2019 4127 4037 597 255 79 111 chr10 55882049 55882274 -89707014 - L1MEc LINE L1 -4806 1504 1273 2130 129 0 10 chr10 55882274 55882585 -89706703 - AluSx SINE Alu -1 311 4 597 255 79 111 chr10 55882585 55882979 -89706309 - L1MEc LINE L1 -5037 1273 905 897 236 101 4 chr10 55882987 55883224 -89706064 + MLT1E1 LTR MaLR 395 654 0 252 172 0 0 chr10 55884788 55884846 -89704442 + (TG)n Simple_repeat Simple_repeat 2 59 0 23 33 0 0 chr10 55884921 55884951 -89704337 + AT_rich Low_complexity Low_complexity 1 30 0 270 136 0 0 chr10 55885074 55885118 -89704170 + (T)n Simple_repeat Simple_repeat 1 44 0 243 175 109 3 chr10 55885181 55885400 -89703888 + AluJb SINE Alu 7 300 -2 1917 159 3 0 chr10 55885427 55885728 -89703560 - AluSx SINE Alu -10 302 1 295 321 66 71 chr10 55885847 55886634 -89702654 - L1MEc LINE L1 -5335 784 2 21 0 0 0 chr10 55886678 55886699 -89702589 + AT_rich Low_complexity Low_complexity 1 21 0 556 380 22 0 chr10 55887930 55888159 -89701129 - MIR SINE MIR -27 235 2 211 337 20 20 chr10 55888547 55888645 -89700643 - MIR SINE MIR -122 140 43 524 286 141 69 chr10 55888655 55888959 -89700329 - L2 LINE L2 -5 3308 2983 1573 195 75 47 chr10 55888970 55889237 -89700051 + MLT2C2 LTR ERVL 1 259 -205 2677 35 3 0 chr10 55889237 55889547 -89699741 + AluY SINE Alu 1 311 0 1573 195 75 47 chr10 55889547 55889690 -89699598 + MLT2C2 LTR ERVL 259 428 -36 295 60 40 0 chr10 55889690 55889740 -89699548 + (TCTA)n Simple_repeat Simple_repeat 3 54 0 1573 195 75 47 chr10 55889740 55889779 -89699509 + MLT2C2 LTR ERVL 428 464 0 711 215 99 18 chr10 55889783 55890084 -89699204 + MLT1A1 LTR MaLR 1 365 0 276 353 31 43 chr10 55890093 55890419 -89698869 - L2 LINE L2 0 3313 2992 222 372 44 7 chr10 55890550 55890687 -89698601 - L2 LINE L2 -372 2942 2801 1386 252 46 0 chr10 55890723 55891072 -89698216 + MLT1A1 LTR MaLR 1 365 0 201 307 121 21 chr10 55891099 55891239 -89698049 - MIR SINE MIR -56 206 53 22 0 0 0 chr10 55891505 55891527 -89697761 + AT_rich Low_complexity Low_complexity 1 22 0 2685 196 92 51 chr10 55892912 55893443 -89695845 + MER50 LTR ERV1 1 568 -166 2934 174 23 82 chr10 55893443 55894177 -89695111 + LTR8 LTR ERV1 1 691 0 2685 196 92 51 chr10 55894177 55894328 -89694960 + MER50 LTR ERV1 568 711 -23 590 196 76 46 chr10 55894357 55894498 -89694790 + L1MC3 LINE L1 5149 5284 -948 2327 82 0 3 chr10 55894498 55894791 -89694497 + AluY SINE Alu 13 304 -7 590 196 76 46 chr10 55894791 55894945 -89694343 + L1MC3 LINE L1 5284 5453 -779 505 177 0 201 chr10 55894950 55895004 -89694284 + L1MC3 LINE L1 5621 5684 -660 2050 115 0 0 chr10 55895004 55895283 -89694005 + AluY SINE Alu 1 279 -32 505 177 0 201 chr10 55895283 55895437 -89693851 + L1MC3 LINE L1 5684 5787 -557 5010 95 11 1 chr10 55895437 55896152 -89693136 - LTR30 LTR ERV1 0 722 1 3248 103 4 9 chr10 55896152 55896616 -89692672 - HERV30 LTR ERV1 0 8257 7796 27318 94 8 2 chr10 55896618 55900207 -89689081 - HERV30 LTR ERV1 -4644 3613 1 4940 99 10 4 chr10 55900207 55900925 -89688363 - LTR30 LTR ERV1 0 722 1 2130 204 59 38 chr10 55900925 55901293 -89687995 + L1MC3 LINE L1 5784 6172 -1613 2083 139 0 0 chr10 55901293 55901588 -89687700 + AluSx SINE Alu 6 300 -12 2130 204 59 38 chr10 55901588 55901828 -89687460 + L1MC3 LINE L1 6172 6405 -1380 180 0 0 0 chr10 55901842 55901862 -89687426 + (TA)n Simple_repeat Simple_repeat 2 21 0 335 165 53 0 chr10 55901921 55902054 -89687234 + (TA)n Simple_repeat Simple_repeat 1 140 0 5310 204 80 18 chr10 55902094 55902693 -89686595 + L1MC3 LINE L1 6404 6964 -821 180 77 0 0 chr10 55902693 55902719 -89686569 + (TAAA)n Simple_repeat Simple_repeat 4 29 0 5310 204 80 18 chr10 55902719 55903416 -89685872 + L1MC3 LINE L1 6964 7781 -4 193 378 77 21 chr10 55903424 55903567 -89685721 - L2 LINE L2 -290 3023 2873 265 346 10 0 chr10 55904829 55904933 -89684355 - MIR SINE MIR -87 175 71 500 290 195 5 chr10 55905081 55905281 -89684007 - MIR SINE MIR -23 239 2 1603 187 14 10 chr10 55905412 55905706 -89683582 + AluJb SINE Alu 1 295 -17 1962 134 0 3 chr10 55906265 55906594 -89682694 - AluSq SINE Alu 0 328 1 262 339 18 0 chr10 55906721 55906830 -89682458 + MLT1J1 LTR MaLR 4 114 -332 393 332 55 50 chr10 55906881 55907080 -89682208 + MLT1J2 LTR MaLR 237 437 -10 421 302 116 5 chr10 55907269 55907484 -89681804 + MIR SINE MIR 15 253 -9 34 65 0 0 chr10 55907893 55907955 -89681333 + AT_rich Low_complexity Low_complexity 1 62 0 204 267 0 17 chr10 55909413 55909473 -89679815 + (TA)n Simple_repeat Simple_repeat 2 60 0 428 283 40 45 chr10 55909606 55909685 -89679603 - L1MC/D LINE L1 -2042 5766 5688 1595 157 59 3 chr10 55909685 55909972 -89679316 + AluSx SINE Alu 1 303 -9 428 283 40 45 chr10 55909972 55910115 -89679173 - L1MC/D LINE L1 -2120 5688 5545 1320 189 34 7 chr10 55910279 55910654 -89678634 - L1M1 LINE L1 -611 5567 5219 366 252 18 9 chr10 55910647 55910758 -89678530 - L1M1 LINE L1 -2541 3605 3494 * 2304 222 45 6 chr10 55910764 55911251 -89678037 - LTR53 LTR ERVL -13 506 1 1141 277 42 27 chr10 55911251 55911890 -89677398 - L1M4 LINE L1 -2641 3741 3093 328 229 0 0 chr10 55911891 55911961 -89677327 - L1M4 LINE L1 -4774 1610 1541 199 152 0 0 chr10 55913115 55913148 -89676140 + MIR SINE MIR 69 101 -161 466 310 91 16 chr10 55913149 55913336 -89675952 - L3 LINE CR1 -2 1575 1375 23 33 0 0 chr10 55913411 55913441 -89675847 + AT_rich Low_complexity Low_complexity 1 30 0 874 315 52 3 chr10 55913491 55913796 -89675492 + MLT1I LTR MaLR 1 320 -89 674 305 120 35 chr10 55915293 55915626 -89673662 + HAL1 LINE L1 992 1296 -1211 1595 180 10 14 chr10 55915626 55915921 -89673367 - AluJb SINE Alu -18 294 1 674 305 120 35 chr10 55915921 55916347 -89672941 + HAL1 LINE L1 1296 1815 -692 525 174 9 28 chr10 55917308 55917417 -89671871 + FLAM_A SINE Alu 23 129 -13 25 31 0 0 chr10 55917429 55917461 -89671827 + AT_rich Low_complexity Low_complexity 1 32 0 225 94 0 0 chr10 55918125 55918157 -89671131 + (TA)n Simple_repeat Simple_repeat 2 33 0 3342 162 40 7 chr10 55919240 55919845 -89669443 - MER67C LTR ERV1 0 710 86 305 149 15 30 chr10 55920215 55920282 -89669006 + MER53 DNA DNA 1 66 -123 443 297 39 0 chr10 55920522 55920650 -89668638 - MIR SINE MIR -6 256 124 219 349 23 39 chr10 55920752 55920881 -89668407 + MIR3 SINE MIR 41 167 -41 369 0 0 0 chr10 55921450 55921491 -89667797 + (TC)n Simple_repeat Simple_repeat 1 41 0 1550 204 115 85 chr10 55922705 55923254 -89666034 - MLT1F1 LTR MaLR 0 567 8 441 41 27 14 chr10 55923961 55924034 -89665254 + (TCTA)n Simple_repeat Simple_repeat 3 76 0 313 355 153 22 chr10 55924302 55924623 -89664665 - L3 LINE CR1 -3 1574 1212 7155 208 47 29 chr10 55925171 55928048 -89661240 - L1MCa LINE L1 -3401 3025 5 586 348 75 19 chr10 55929043 55929310 -89659978 + L2 LINE L2 1106 1387 -1927 421 284 8 31 chr10 55929311 55929438 -89659850 + L2 LINE L2 1504 1627 -1687 1931 115 10 0 chr10 55929486 55929774 -89659514 - L1PB1 LINE L1 -3 6148 5858 5650 178 29 45 chr10 55929810 55931557 -89657731 - L1PB1 LINE L1 -278 5873 4020 3385 119 61 46 chr10 55931555 55932229 -89657059 + L1PBa LINE L1 1778 2461 -4402 * 2052 301 93 28 chr10 55932231 55932700 -89656588 + L2 LINE L2 1714 2151 -1163 2323 81 10 0 chr10 55932700 55932997 -89656291 - AluY SINE Alu -11 300 1 2052 301 93 28 chr10 55932997 55933498 -89655790 + L2 LINE L2 2151 2747 -567 540 159 35 55 chr10 55934337 55934482 -89654806 - L1MA6 LINE L1 -11 6289 6148 1572 173 18 7 chr10 55936356 55936659 -89652629 - AluJb SINE Alu 0 306 1 226 345 21 49 chr10 55936886 55937028 -89652260 - MIR3 SINE MIR -21 187 50 3158 94 2 9 chr10 55937108 55937565 -89651723 + L1PB1 LINE L1 5698 6151 0 21 0 0 0 chr10 55937736 55937757 -89651531 + AT_rich Low_complexity Low_complexity 1 21 0 1635 193 45 69 chr10 55937769 55937968 -89651320 + MSTD LTR MaLR 3 188 -208 1576 186 7 10 chr10 55937968 55938264 -89651024 + AluJo SINE Alu 11 305 -7 1635 193 45 69 chr10 55938264 55938468 -89650820 + MSTD LTR MaLR 188 396 0 345 328 32 21 chr10 55939446 55939635 -89649653 + MIR SINE MIR 13 203 -59 2065 124 3 0 chr10 55939695 55939985 -89649303 + AluSx SINE Alu 1 291 -21 276 300 100 0 chr10 55940393 55940493 -89648795 + MIR3 SINE MIR 45 154 -54 407 258 45 19 chr10 55940534 55940689 -89648599 - MER103 DNA DNA -2 164 6 1483 237 74 92 chr10 55941387 55942025 -89647263 - LTR41 LTR ERVL -147 626 1 1600 232 114 68 chr10 55942113 55942733 -89646555 + MLT1E1 LTR MaLR 6 654 0 367 275 0 90 chr10 55944554 55944715 -89644573 - MIR3 SINE MIR -31 177 35 376 195 242 8 chr10 55945303 55945431 -89643857 - MER104 DNA Tc2 0 180 23 241 363 20 20 chr10 55945534 55945636 -89643652 + L2 LINE L2 2952 3053 -219 1371 189 56 3 chr10 55945987 55946273 -89643015 - AluJo SINE Alu -10 302 2 653 158 14 48 chr10 55946530 55946676 -89642612 + L1MA6 LINE L1 6148 6288 -12 622 262 78 45 chr10 55946701 55946913 -89642375 + MIR SINE MIR 4 216 -46 808 238 6 6 chr10 55949260 55949441 -89639847 + L1MC1 LINE L1 3964 4144 -2002 745 245 6 0 chr10 55949442 55949601 -89639687 + MLT1A1 LTR MaLR 2 161 -204 4688 215 73 9 chr10 55949601 55951617 -89637671 + L1MC1 LINE L1 4186 6332 -1 294 138 17 17 chr10 55951642 55951700 -89637588 - MLT1H LTR MaLR 0 549 492 2293 200 30 84 chr10 55951840 55952364 -89636924 + LTR31 LTR ERV1 1 485 -134 751 167 14 0 chr10 55952364 55952502 -89636786 - L1PB4 LINE L1 -17 6139 6000 2293 200 30 84 chr10 55952502 55952616 -89636672 + LTR31 LTR ERV1 485 604 -15 405 335 70 22 chr10 55952829 55953056 -89636232 + MIR SINE MIR 11 248 -14 3087 223 62 16 chr10 55953506 55954322 -89634966 - L1MC3 LINE L1 -3 7782 6929 194 300 25 50 chr10 55955939 55956019 -89633269 + MER5A DNA MER1_type 40 117 -72 270 0 0 0 chr10 55956127 55956157 -89633131 + (A)n Simple_repeat Simple_repeat 1 30 0 1430 236 88 8 chr10 55956248 55956613 -89632675 - MSTD LTR MaLR 0 396 3 1346 199 86 3 chr10 55956615 55956906 -89632382 - MSTD-int LTR MaLR 0 1735 1421 1875 128 0 0 chr10 55956914 55957171 -89632117 - AluSx SINE Alu -53 259 3 1004 257 11 22 chr10 55957172 55957444 -89631844 - MSTD-int LTR MaLR -1059 676 408 745 213 30 12 chr10 55957441 55957610 -89631678 - MSTD-int LTR MaLR -1562 173 2 * 1367 261 82 5 chr10 55957611 55957979 -89631309 - MSTD LTR MaLR 0 396 1 373 315 0 0 chr10 55959245 55959356 -89629932 + MER94 DNA DNA 19 129 -5 311 333 117 6 chr10 55960027 55960198 -89629090 + MIR SINE MIR 19 208 -54 29 28 0 0 chr10 55961188 55961224 -89628064 + AT_rich Low_complexity Low_complexity 1 36 0 26 50 0 0 chr10 55961272 55961312 -89627976 + AT_rich Low_complexity Low_complexity 1 40 0 21 36 0 0 chr10 55961389 55961417 -89627871 + AT_rich Low_complexity Low_complexity 1 28 0 210 301 32 81 chr10 55963956 55964079 -89625209 + L2 LINE L2 2927 3043 -229 519 266 36 0 chr10 55964098 55964237 -89625051 - MSTB LTR MaLR -282 144 1 235 207 17 35 chr10 55964321 55964379 -89624909 - HAL1 LINE L1 -2185 322 266 415 290 62 0 chr10 55964391 55964553 -89624735 - HAL1 LINE L1 -2288 219 48 201 74 0 0 chr10 55964715 55964742 -89624546 + (GAAAA)n Simple_repeat Simple_repeat 2 28 0 509 277 69 47 chr10 55965787 55966271 -89623017 + MLT2E LTR ERVL 3 586 -42 1919 163 37 8 chr10 55966271 55966626 -89622662 - MLT1A1 LTR MaLR 0 365 1 509 277 69 47 chr10 55966626 55966668 -89622620 + MLT2E LTR ERVL 586 626 -2 2013 254 76 34 chr10 55967841 55968404 -89620884 + MLT1E LTR MaLR 7 593 0 2588 260 78 47 chr10 55968409 55969175 -89620113 - L1MC4a LINE L1 -1190 6618 5802 2089 101 3 7 chr10 55969175 55969462 -89619826 - AluSx SINE Alu -23 289 4 2588 260 78 47 chr10 55969462 55969880 -89619408 - L1MC4a LINE L1 -2006 5802 5398 4302 133 181 7 chr10 55970135 55971095 -89618193 + MER11B LTR ERVK 1 1236 0 450 300 124 45 chr10 55971241 55971381 -89617907 - L1MC4a LINE L1 -1149 4997 4870 5866 150 61 35 chr10 55971381 55972581 -89616707 - Tigger3b DNA MER2_type 0 1231 1 450 300 124 45 chr10 55972581 55973311 -89615977 - L1MC4a LINE L1 -1276 4870 4058 236 267 11 33 chr10 55973352 55973442 -89615846 + (TATATG)n Simple_repeat Simple_repeat 4 91 0 326 336 83 21 chr10 55973541 55973916 -89615372 - L1MC4a LINE L1 -2231 3915 3520 22 35 0 0 chr10 55974366 55974395 -89614893 + AT_rich Low_complexity Low_complexity 1 29 0 447 196 54 0 chr10 55974793 55974885 -89614403 - FRAM SINE Alu -82 94 1 21 36 0 0 chr10 55975043 55975071 -89614217 + AT_rich Low_complexity Low_complexity 1 28 0 2006 135 20 0 chr10 55975322 55975618 -89613670 + AluSx SINE Alu 1 302 -10 285 98 0 0 chr10 55975618 55975659 -89613629 + (GGA)n Simple_repeat Simple_repeat 2 42 0 264 325 146 7 chr10 55976148 55976299 -89612989 + MIR SINE MIR 53 224 -38 428 239 26 43 chr10 55977193 55977310 -89611978 - MER5A DNA MER1_type -71 118 4 22 0 0 0 chr10 55978288 55978310 -89610978 + AT_rich Low_complexity Low_complexity 1 22 0 580 300 34 48 chr10 55978441 55978734 -89610554 - MER110 LTR ERV1 -16 475 187 10690 103 4 2 chr10 55978755 55981094 -89608194 + L1PA8 LINE L1 3808 6158 -14 3091 138 6 10 chr10 55981094 55981598 -89607690 + L1PA16 LINE L1 5652 6157 -9 451 223 18 32 chr10 55981645 55981831 -89607457 - MER110 LTR ERV1 -312 179 18 605 250 0 7 chr10 55981848 55982000 -89607288 - L1MB7 LINE L1 -10 6174 6024 200 132 0 26 chr10 55982345 55982383 -89606905 + (TTTTTA)n Simple_repeat Simple_repeat 1 37 0 298 280 0 40 chr10 55983692 55983767 -89605521 - MER110-int LTR ERV1 -1832 2815 2744 669 340 5 0 chr10 55983811 55984017 -89605271 - MER110-int LTR ERV1 -2000 2647 2441 1600 170 118 16 chr10 55984684 55984990 -89604298 - MER1B DNA MER1_type 0 337 1 2574 174 22 110 chr10 55985408 55986163 -89603125 - LTR8 LTR ERV1 -2 689 1 240 35 0 0 chr10 55986629 55986658 -89602630 + (A)n Simple_repeat Simple_repeat 1 29 0 5059 51 49 4 chr10 55986776 55987467 -89601821 + LTR30 LTR ERV1 1 722 0 206 306 0 42 chr10 55987567 55987639 -89601649 - MIR3 SINE MIR -1 207 139 24 32 0 0 chr10 55988561 55988592 -89600696 + AT_rich Low_complexity Low_complexity 1 31 0 187 300 0 0 chr10 55988661 55988711 -89600577 + MER5A DNA MER1_type 57 106 -83 333 109 0 0 chr10 55989133 55989188 -89600100 - L1MA9 LINE L1 -2 6310 6256 199 278 0 78 chr10 55989413 55989503 -89599785 - L2 LINE L2 -243 3070 2988 238 325 53 18 chr10 55990581 55990695 -89598593 - L2 LINE L2 -361 2953 2836 220 123 18 70 chr10 55990851 55990908 -89598380 + A-rich Low_complexity Low_complexity 2 55 0 479 328 121 5 chr10 55991801 55991999 -89597289 + MIR SINE MIR 2 222 -40 228 336 53 18 chr10 55992222 55992335 -89596953 + MIR SINE MIR 34 150 -58 801 258 77 32 chr10 55992342 55992652 -89596636 - MER110 LTR ERV1 -2 489 166 312 309 12 0 chr10 55993938 55994019 -89595269 + MIR SINE MIR 64 145 -117 193 169 34 0 chr10 55994559 55994618 -89594670 + (TA)n Simple_repeat Simple_repeat 2 62 0 351 0 0 0 chr10 55994760 55994799 -89594489 + (CA)n Simple_repeat Simple_repeat 1 39 0 28 29 0 0 chr10 55998002 55998037 -89591251 + AT_rich Low_complexity Low_complexity 1 35 0 1491 168 132 43 chr10 55999431 55999824 -89589464 - MSTA LTR MaLR 0 428 1 680 232 61 22 chr10 55999966 56000147 -89589141 + MER5A DNA MER1_type 2 189 0 1894 130 0 21 chr10 56000190 56000475 -89588813 + AluSx SINE Alu 6 284 -28 301 296 112 28 chr10 56000543 56000722 -89588566 - MLT1L LTR MaLR -24 591 398 278 276 82 8 chr10 56000771 56000905 -89588383 + L1ME4a LINE L1 5965 6108 -13 184 149 43 0 chr10 56000911 56000958 -89588330 + GA-rich Low_complexity Low_complexity 3 51 0 243 88 0 0 chr10 56001517 56001551 -89587737 + (TTA)n Simple_repeat Simple_repeat 1 34 0 571 179 18 18 chr10 56002575 56002687 -89586601 + MER21B LTR ERV1 329 440 -423 7878 185 83 41 chr10 56002688 56003628 -89585660 + MER21B-int LTR ERV1 2072 2970 -1221 1541 156 51 0 chr10 56003628 56003884 -89585404 + AluSq SINE Alu 26 294 -19 7878 185 83 41 chr10 56003884 56004859 -89584429 + MER21B-int LTR ERV1 2970 4132 -59 406 227 0 0 chr10 56004949 56005024 -89584264 + MER21B LTR ERV1 10 84 -779 642 221 0 22 chr10 56005033 56005169 -89584119 - FLAM_C SINE Alu -10 133 1 2020 203 57 10 chr10 56005170 56005575 -89583713 + MER21B LTR ERV1 79 502 -361 242 294 33 0 chr10 56005630 56005722 -89583566 + GA-rich Low_complexity Low_complexity 1 95 0 1768 136 10 52 chr10 56006470 56006780 -89582508 + AluSx SINE Alu 1 297 -15 207 0 0 0 chr10 56006881 56006904 -89582384 + (TTTTA)n Simple_repeat Simple_repeat 4 26 0 2789 176 64 70 chr10 56007415 56008146 -89581142 - LTR8A LTR ERV1 0 727 1 459 302 31 31 chr10 56008553 56008682 -89580606 + L2 LINE L2 3143 3271 -1 442 327 6 6 chr10 56008787 56008943 -89580345 + MIR SINE MIR 100 255 -7 1537 195 29 44 chr10 56008951 56009336 -89579952 - MLT1B LTR MaLR -11 379 1 2996 58 10 0 chr10 56009381 56009777 -89579511 - L1P LINE L1 -1094 5052 4653 301 109 0 0 chr10 56009970 56010016 -89579272 - MADE1 DNA Mariner -34 46 1 841 281 56 8 chr10 56010081 56010405 -89578883 - L2 LINE L2 -258 3055 2719 26 50 0 0 chr10 56010422 56010462 -89578826 + AT_rich Low_complexity Low_complexity 1 40 0 1172 175 27 55 chr10 56010814 56011071 -89578217 - MLT1D LTR MaLR -2 503 254 28915 82 10 13 chr10 56011170 56015197 -89574091 - L1P LINE L1 -2129 4017 2 2203 119 0 0 chr10 56015197 56015492 -89573796 - AluSq SINE Alu -18 295 1 1341 148 10 5 chr10 56015523 56015732 -89573556 + THE1B LTR MaLR 155 364 0 406 114 26 0 chr10 56015798 56015878 -89573410 + MLT1D LTR MaLR 439 505 0 23 33 0 0 chr10 56016465 56016495 -89572793 + AT_rich Low_complexity Low_complexity 1 30 0 723 169 0 0 chr10 56017604 56017755 -89571533 - FLAM_C SINE Alu 0 151 1 948 127 0 0 chr10 56018186 56018320 -89570968 - AluSg/x SINE Alu -13 299 166 1626 179 40 10 chr10 56019200 56019496 -89569792 - AluJo SINE Alu -7 305 1 2124 121 3 0 chr10 56019546 56019836 -89569452 + AluSx SINE Alu 9 299 -13 303 146 0 0 chr10 56020095 56020150 -89569138 + (TG)n Simple_repeat Simple_repeat 2 56 0 497 260 20 47 chr10 56020354 56020504 -89568784 - MIR SINE MIR -31 231 86 23 86 0 0 chr10 56021505 56021563 -89567725 + AT_rich Low_complexity Low_complexity 1 58 0 1921 265 29 13 chr10 56021987 56022508 -89566780 - L1ME1 LINE L1 -18 6148 5620 21 0 0 0 chr10 56023403 56023424 -89565864 + AT_rich Low_complexity Low_complexity 1 21 0 2836 6 0 6 chr10 56025107 56025420 -89563868 + AluYa5 SINE Alu 1 311 0 1620 78 9 5 chr10 56025704 56025922 -89563366 + AluY SINE Alu 85 303 -8 369 298 0 9 chr10 56026308 56026422 -89562866 - L2 LINE L2 -8 3305 3193 2114 156 60 23 chr10 56026588 56027012 -89562276 + MSTB LTR MaLR 1 426 0 1948 148 38 27 chr10 56027872 56028243 -89561045 - THE1C LTR MaLR 0 375 1 10048 122 19 32 chr10 56028243 56029844 -89559444 - THE1C-int LTR MaLR 0 1580 1 2106 146 30 19 chr10 56029844 56030215 -89559073 - THE1C LTR MaLR 0 375 1 2968 221 66 17 chr10 56030977 56032084 -89557204 + L1MC2 LINE L1 4668 5846 -498 180 0 0 0 chr10 56032084 56032104 -89557184 + (CAAAT)n Simple_repeat Simple_repeat 2 21 0 2968 221 66 17 chr10 56032104 56032320 -89556968 + L1MC2 LINE L1 5846 6050 -294 2266 163 31 19 chr10 56032320 56032743 -89556545 - MSTA LTR MaLR 0 428 1 4659 181 45 1 chr10 56032750 56033575 -89555713 - MSTA-int LTR MaLR -1 1650 790 943 226 79 33 chr10 56033646 56033951 -89555337 + MER63 DNA MER1_type 742 1060 -1 451 270 94 6 chr10 56034012 56034171 -89555117 - MIR SINE MIR -78 184 12 216 367 61 10 chr10 56034374 56034472 -89554816 - MIR SINE MIR -113 149 47 382 238 105 29 chr10 56035091 56035196 -89554092 + L2 LINE L2 3191 3303 -10 442 157 11 22 chr10 56035230 56035319 -89553969 + MLT1D LTR MaLR 418 505 0 603 256 67 51 chr10 56035774 56036109 -89553179 + LTR35 LTR ERV1 191 618 0 6318 190 207 2 chr10 56037104 56038406 -89550882 + L1PA16 LINE L1 2 1570 -5279 6197 115 19 1 chr10 56038395 56039366 -89549922 - L1PA8A LINE L1 -790 5356 4369 * 5650 91 1 4 chr10 56039363 56040136 -89549152 + L1PA8A LINE L1 5361 6131 0 * 12308 197 35 31 chr10 56040148 56042339 -89546949 + L1PA16 LINE L1 1546 3728 -3141 2137 114 0 7 chr10 56042339 56042636 -89546652 + AluSg SINE Alu 3 297 -13 12308 197 35 31 chr10 56042636 56043629 -89545659 + L1PA16 LINE L1 3728 4716 -2153 2159 112 0 20 chr10 56043629 56043932 -89545356 + AluSg SINE Alu 3 299 -11 12308 197 35 31 chr10 56043932 56046087 -89543201 + L1PA16 LINE L1 4716 6864 -5 25 0 0 0 chr10 56046245 56046270 -89543018 + AT_rich Low_complexity Low_complexity 1 25 0 368 209 61 9 chr10 56046305 56046317 -89542971 - L1MA10 LINE L1 -2 6332 6321 2031 253 117 36 chr10 56046317 56047121 -89542167 - L1ME1 LINE L1 -5 6095 5358 1447 194 27 14 chr10 56047121 56047415 -89541873 - AluJo SINE Alu -14 298 1 2031 253 117 36 chr10 56047415 56048027 -89541261 - L1ME1 LINE L1 -742 5358 4566 346 333 13 26 chr10 56048036 56048192 -89541096 - L1ME1 LINE L1 -5657 413 260 496 370 61 20 chr10 56048247 56048642 -89540646 - L1ME LINE L1 -5559 511 101 317 382 38 27 chr10 56049427 56049613 -89539675 + MIR SINE MIR 4 191 -71 862 206 78 138 chr10 56050047 56050307 -89538981 - MLT1B LTR MaLR 0 390 116 1009 177 0 0 chr10 56050307 56050465 -89538823 - FAM SINE Alu -17 158 1 862 206 78 138 chr10 56050465 56050505 -89538783 - MLT1B LTR MaLR -274 116 75 3296 151 39 7 chr10 56050505 56051089 -89538199 - LTR26 LTR ERV1 0 603 1 862 206 78 138 chr10 56051089 56051200 -89538088 - MLT1B LTR MaLR -315 75 3 3159 251 61 32 chr10 56052026 56052609 -89536679 - L1M1 LINE L1 -3007 3321 2756 1748 191 0 7 chr10 56052609 56052918 -89536370 - AluJb SINE Alu 0 312 6 3159 251 61 32 chr10 56052918 56054299 -89534989 - L1M1 LINE L1 -3572 2756 1157 1639 185 26 20 chr10 56054299 56054601 -89534687 - AluJb SINE Alu -8 304 1 3159 251 61 32 chr10 56054601 56054989 -89534299 - L1M1 LINE L1 -5171 1157 782 1917 270 58 35 chr10 56055031 56055687 -89533601 - L1M1 LINE L1 -4626 702 32 398 271 64 27 chr10 56055699 56055851 -89533437 - L1MC4 LINE L1 -478 7564 7402 4006 225 74 81 chr10 56055851 56057618 -89531670 + MER52A LTR ERV1 1 1755 0 398 271 64 27 chr10 56057618 56057653 -89531635 - L1MC4 LINE L1 -640 7402 7370 458 306 136 34 chr10 56058326 56058561 -89530727 + MIR SINE MIR 4 262 0 206 352 14 42 chr10 56058729 56058871 -89530417 + L2 LINE L2 2689 2826 -488 244 192 55 27 chr10 56059499 56059572 -89529716 - MLT1I LTR MaLR -330 79 5 648 325 103 47 chr10 56060889 56061864 -89527424 + L1M4 LINE L1 2613 3641 -2505 405 301 68 45 chr10 56061955 56062264 -89527024 + L1M4 LINE L1 3813 4128 -2018 * 495 319 61 96 chr10 56062252 56063051 -89526237 + L1M4 LINE L1 4522 5292 -854 4672 188 19 12 chr10 56063383 56064497 -89524791 + L1PBa LINE L1 2771 3890 -2972 324 345 31 71 chr10 56064589 56064844 -89524444 + L1MB1 LINE L1 680 924 -5379 2233 262 102 24 chr10 56064845 56065299 -89523989 + L1MB1 LINE L1 972 1389 -4993 2524 32 3 25 chr10 56065299 56065614 -89523674 + AluYa5 SINE Alu 1 308 -3 2233 262 102 24 chr10 56065614 56066856 -89522432 + L1MB1 LINE L1 1389 2567 -3815 3472 196 21 77 chr10 56066862 56067276 -89522012 + L1MB1 LINE L1 5206 5642 -762 1562 172 37 0 chr10 56067276 56067549 -89521739 + AluJo SINE Alu 1 283 -29 3472 196 21 77 chr10 56067549 56068377 -89520911 + L1MB1 LINE L1 5642 6403 -1 27 0 0 0 chr10 56069595 56069622 -89519666 + AT_rich Low_complexity Low_complexity 1 27 0 306 329 138 0 chr10 56070096 56070248 -89519040 - MIR3 SINE MIR -31 177 5 232 336 28 19 chr10 56071028 56071135 -89518153 - MIR SINE MIR -65 143 36 1781 217 60 31 chr10 56071855 56072314 -89516974 - MLT2B1 LTR ERVL 0 520 45 1761 189 130 0 chr10 56072314 56072690 -89516598 - MSTA LTR MaLR -3 425 1 1781 217 60 31 chr10 56072690 56072713 -89516575 - MLT2B1 LTR ERVL -475 45 24 4057 212 56 18 chr10 56072713 56073355 -89515933 - MSTA-int LTR MaLR -24 1627 938 1784 161 140 11 chr10 56073355 56073734 -89515554 - MSTA LTR MaLR 0 428 1 4057 212 56 18 chr10 56073734 56074006 -89515282 - MSTA-int LTR MaLR -713 938 678 2065 87 30 45 chr10 56074008 56074340 -89514948 - MLT2A1 LTR ERVL -117 327 1 3789 180 132 42 chr10 56074411 56075403 -89513885 - L1MC1 LINE L1 -66 6267 5186 2393 230 117 34 chr10 56075439 56076406 -89512882 - L1MC1 LINE L1 -1140 5006 3960 2197 266 51 33 chr10 56076920 56078039 -89511249 + L1MB1 LINE L1 1240 2504 -3878 2052 139 128 8 chr10 56078039 56078421 -89510867 - MSTA LTR MaLR 0 428 1 2197 266 51 33 chr10 56078421 56079259 -89510029 + L1MB1 LINE L1 2504 3326 -3056 4561 28 0 0 chr10 56079266 56079810 -89509478 - L1P LINE L1 -3906 2240 1697 7415 27 5 0 chr10 56079810 56081063 -89508225 + L1PA3 LINE L1 4885 6141 -14 920 218 73 28 chr10 56081063 56081417 -89507871 + L1MB1 LINE L1 3331 3700 -2682 3745 200 18 34 chr10 56081514 56083030 -89506258 + L1MB1 LINE L1 4910 6398 -6 27 29 0 0 chr10 56083148 56083182 -89506106 + AT_rich Low_complexity Low_complexity 1 34 0 427 163 0 0 chr10 56083186 56083266 -89506022 - L1 LINE L1 -1815 4331 4252 3696 179 28 26 chr10 56083266 56084061 -89505227 + L1MA4 LINE L1 5497 6296 -4 231 200 0 0 chr10 56084487 56084532 -89504756 + MLT2C1 LTR ERVL 1 45 -352 193 221 73 44 chr10 56084673 56084741 -89504547 + MIR SINE MIR 116 185 -77 1599 145 47 179 chr10 56085937 56086428 -89502860 - MSTB LTR MaLR 0 426 1 199 177 32 0 chr10 56087603 56087665 -89501623 + (TTATA)n Simple_repeat Simple_repeat 1 64 0 468 275 60 74 chr10 56088660 56088929 -89500359 + L1MEd LINE L1 840 1104 -5015 636 340 77 22 chr10 56088929 56089533 -89499755 + HERV16 LTR ERVL 1031 1733 -3263 1922 371 64 32 chr10 56089536 56090110 -89499178 + HERV16 LTR ERVL 2212 2766 -2998 2523 111 14 0 chr10 56090110 56090469 -89498819 - THE1B LTR MaLR 0 364 1 10271 111 19 33 chr10 56090469 56092072 -89497216 - THE1B-int LTR MaLR 0 1580 1 2731 102 0 0 chr10 56092072 56092436 -89496852 - THE1B LTR MaLR 0 364 1 1922 371 64 32 chr10 56092436 56092625 -89496663 + HERV16 LTR ERVL 2766 2948 -2816 1583 191 132 20 chr10 56092625 56092981 -89496307 - THE1B LTR MaLR 0 396 1 1922 371 64 32 chr10 56092981 56094351 -89494937 + HERV16 LTR ERVL 2948 4416 -1348 48 77 0 0 chr10 56095163 56095267 -89494021 + AT_rich Low_complexity Low_complexity 1 104 0 30 27 0 0 chr10 56095330 56095367 -89493921 + AT_rich Low_complexity Low_complexity 1 37 0 4309 202 30 21 chr10 56095395 56097169 -89492119 - L1MB1 LINE L1 -17 6208 4410 315 319 26 17 chr10 56097199 56097315 -89491973 - MER5B DNA MER1_type 0 178 62 281 290 76 0 chr10 56097318 56097463 -89491825 - L1MB1 LINE L1 -2116 4087 3932 2076 160 11 0 chr10 56097475 56097838 -89491450 - L1PB2 LINE L1 -3 6148 5782 302 263 50 0 chr10 56097977 56098057 -89491231 + MIR SINE MIR 98 181 -81 180 0 0 0 chr10 56098057 56098077 -89491211 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 765 200 96 26 chr10 56098086 56098356 -89490932 - L1MB1 LINE L1 -2793 3410 3122 2653 174 49 6 chr10 56098363 56098898 -89490390 + L1MB1 LINE L1 5620 6177 -12 958 194 0 49 chr10 56098880 56099127 -89490161 + L1MC3 LINE L1 7551 7785 0 * 21 71 0 0 chr10 56099156 56099198 -89490090 + AT_rich Low_complexity Low_complexity 1 42 0 595 202 65 0 chr10 56099213 56099337 -89489951 + L1MC3 LINE L1 6715 6846 -939 1635 115 24 8 chr10 56099465 56099718 -89489570 - L1MB1 LINE L1 -4327 1877 1621 281 154 0 19 chr10 56099750 56099791 -89489497 + L1PBa LINE L1 2232 2273 -4590 1562 88 69 5 chr10 56099791 56100008 -89489280 + AluSx SINE Alu 33 263 -49 352 106 0 0 chr10 56100018 56100065 -89489223 - L1MB1 LINE L1 -4585 1619 1573 5452 170 29 5 chr10 56100066 56101674 -89487614 - L1MB1 LINE L1 -4897 1307 1 2922 116 14 5 chr10 56101674 56102095 -89487193 - LTR9B LTR ERV1 -219 425 1 2788 168 54 87 chr10 56102319 56103047 -89486241 + MER44D DNA MER2_type 1 704 -1 21 89 0 0 chr10 56103399 56103455 -89485833 + AT_rich Low_complexity Low_complexity 1 56 0 5415 152 24 12 chr10 56103822 56105047 -89484241 - L1PA16 LINE L1 -3 6163 4937 441 189 32 0 chr10 56105190 56105285 -89484003 + MLT1D LTR MaLR 382 479 -26 23 0 0 0 chr10 56105286 56105309 -89483979 + AT_rich Low_complexity Low_complexity 1 23 0 247 294 87 22 chr10 56105417 56105509 -89483779 + L2 LINE L2 3155 3252 -20 22 35 0 0 chr10 56105630 56105659 -89483629 + AT_rich Low_complexity Low_complexity 1 29 0 2432 71 0 0 chr10 56106301 56106611 -89482677 + AluY SINE Alu 1 310 -1 815 198 39 56 chr10 56107107 56107339 -89481949 + L1MB7 LINE L1 5900 6127 -57 388 211 0 0 chr10 56107350 56107426 -89481862 - Tigger2 DNA MER2_type -250 2468 2393 13558 196 28 5 chr10 56107426 56111426 -89477862 - L1PB2 LINE L1 -6 6848 2761 692 204 89 6 chr10 56111648 56111844 -89477444 - MLT1D LTR MaLR -350 155 1 233 337 59 10 chr10 56111913 56112014 -89477274 + L2 LINE L2 3158 3263 -9 261 278 113 61 chr10 56112623 56112738 -89476550 - MER94 DNA DNA 0 134 14 22 35 0 0 chr10 56113117 56113146 -89476142 + AT_rich Low_complexity Low_complexity 1 29 0 273 298 78 35 chr10 56113216 56113357 -89475931 + MIR SINE MIR 57 203 -59 273 333 17 26 chr10 56115728 56115845 -89473443 - MER5B DNA MER1_type -53 125 10 235 293 20 30 chr10 56115853 56115952 -89473336 + GA-rich Low_complexity Low_complexity 2 99 0 356 301 65 13 chr10 56116201 56116354 -89472934 - MER5A DNA MER1_type 0 189 29 223 330 64 35 chr10 56116427 56116600 -89472688 - L2 LINE L2 -10 3303 3126 218 291 22 75 chr10 56116587 56116721 -89472567 - MIR SINE MIR -2 260 134 * 38 0 0 0 chr10 56117376 56117414 -89471874 + AT_rich Low_complexity Low_complexity 1 38 0 416 353 174 5 chr10 56118273 56118497 -89470791 - MIR SINE MIR 0 262 1 460 229 71 24 chr10 56118997 56119167 -89470121 - MER96B DNA MER1_type? -237 180 3 24 77 0 0 chr10 56121151 56121203 -89468085 + AT_rich Low_complexity Low_complexity 1 52 0 30 45 0 0 chr10 56122441 56122485 -89466803 + AT_rich Low_complexity Low_complexity 1 44 0 183 323 90 68 chr10 56123421 56123554 -89465734 - L2 LINE L2 0 3272 3137 2112 147 96 10 chr10 56123743 56124137 -89465151 + MSTA LTR MaLR 1 428 0 6006 179 41 2 chr10 56124137 56125215 -89464073 + MSTA-int LTR MaLR 1 1120 -531 204 227 147 0 chr10 56126084 56126159 -89463129 - MIR SINE MIR 0 262 177 898 164 24 6 chr10 56126410 56126575 -89462713 + L1PA14 LINE L1 5991 6158 -3 1142 191 30 67 chr10 56127465 56127657 -89461631 - L1MA9 LINE L1 -31 6281 6104 18302 113 17 7 chr10 56127657 56130335 -89458953 - Charlie3 DNA MER1_type -4 2706 1 1142 191 30 67 chr10 56130335 56130471 -89458817 - L1MA9 LINE L1 -208 6104 5965 621 219 20 20 chr10 56130472 56130618 -89458670 - AluJo SINE Alu -166 146 1 3459 204 19 6 chr10 56130619 56131751 -89457537 - L1MA9 LINE L1 -528 5784 4642 1229 171 19 0 chr10 56131758 56131924 -89457364 - AluJb SINE Alu -12 300 128 369 0 0 0 chr10 56131924 56131965 -89457323 + (TG)n Simple_repeat Simple_repeat 2 42 0 1229 171 19 0 chr10 56131965 56132009 -89457279 - AluJb SINE Alu -184 128 86 284 140 18 0 chr10 56132022 56132079 -89457209 - L1MA9 LINE L1 -1511 4635 4578 2285 92 24 0 chr10 56132798 56133090 -89456198 + AluSq SINE Alu 3 301 -12 540 196 62 45 chr10 56133544 56133723 -89455565 - MER53 DNA DNA -6 183 2 283 326 186 0 chr10 56133725 56133854 -89455434 + MER5A DNA MER1_type 36 188 -1 246 302 86 54 chr10 56134164 56134385 -89454903 - MIR SINE MIR 0 262 34 3450 99 52 17 chr10 56135322 56135437 -89453851 - MER41A LTR ERV1 0 554 445 2181 42 39 52 chr10 56135437 56135745 -89453543 + AluY SINE Alu 1 304 -7 3450 99 52 17 chr10 56135745 56136164 -89453124 - MER41A LTR ERV1 -109 445 1 462 189 57 0 chr10 56136504 56136610 -89452678 - MER94 DNA DNA -10 124 13 315 245 20 20 chr10 56136948 56137046 -89452242 + T-rich Low_complexity Low_complexity 2 99 0 2705 147 63 56 chr10 56137053 56137657 -89451631 + MER4B LTR ERV1 3 610 0 377 331 35 0 chr10 56138196 56138338 -89450950 + L2 LINE L2 3167 3313 0 482 304 111 32 chr10 56138902 56139218 -89450070 - MLT1J LTR MaLR -143 368 28 3843 206 52 10 chr10 56141315 56142245 -89447043 + L1MA4 LINE L1 3221 4189 -1957 1889 145 58 14 chr10 56142267 56142626 -89446662 - THE1C LTR MaLR 0 375 1 2949 193 77 14 chr10 56142626 56143550 -89445738 + L1MA4 LINE L1 4561 5542 -743 1711 180 41 0 chr10 56143550 56143889 -89445399 + L1MA4 LINE L1 5942 6300 0 494 258 34 68 chr10 56143895 56144190 -89445098 + L1MC4 LINE L1 7570 7854 -188 * 1063 256 131 14 chr10 56144185 56144918 -89444370 + L1M4 LINE L1 2752 3570 -2576 1484 187 42 17 chr10 56144931 56145284 -89444004 + L1MB8 LINE L1 5813 6174 -4 1524 189 18 4 chr10 56145363 56145644 -89443644 + AluJb SINE Alu 12 296 -16 341 220 88 50 chr10 56145661 56145820 -89443468 + L1M4 LINE L1 3846 4010 -2136 544 329 64 0 chr10 56146367 56146586 -89442702 - MIR SINE MIR 0 262 30 1744 139 3 82 chr10 56148654 56148970 -89440318 - MER4A LTR ERV1 -2 662 372 474 112 122 10 chr10 56148993 56149091 -89440197 - MER4A LTR ERV1 -555 109 1 544 301 40 12 chr10 56149150 56149323 -89439965 + MIR SINE MIR 5 182 -80 1688 168 10 3 chr10 56149552 56149844 -89439444 + AluJb SINE Alu 15 308 -4 486 299 99 24 chr10 56149910 56150121 -89439167 + MIR SINE MIR 31 257 -5 21 0 0 0 chr10 56150200 56150221 -89439067 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 56150332 56150353 -89438935 + AT_rich Low_complexity Low_complexity 1 21 0 195 236 73 0 chr10 56151308 56151363 -89437925 - MIR SINE MIR -21 241 183 425 119 0 0 chr10 56151401 56151460 -89437828 + MST-int LTR MaLR 900 958 -693 2377 120 92 3 chr10 56151462 56151853 -89437435 + MSTA LTR MaLR 3 428 0 194 191 21 0 chr10 56151913 56151960 -89437328 + (CATATA)n Simple_repeat Simple_repeat 1 48 0 348 300 0 0 chr10 56151961 56152051 -89437237 - L1MC4 LINE L1 -1339 6703 6614 * 357 300 0 0 chr10 56151973 56152063 -89437225 + L1MC4 LINE L1 6614 6703 -1339 303 175 0 0 chr10 56152066 56152123 -89437165 + (TA)n Simple_repeat Simple_repeat 1 57 0 2182 115 0 0 chr10 56152493 56152781 -89436507 + AluSc SINE Alu 1 288 -21 312 143 0 0 chr10 56153433 56153489 -89435799 + (CA)n Simple_repeat Simple_repeat 1 56 0 245 336 58 29 chr10 56153785 56153922 -89435366 + L2 LINE L2 3169 3309 -4 1292 228 29 0 chr10 56154725 56155001 -89434287 + AluJo SINE Alu 1 284 -28 321 26 0 0 chr10 56155001 56155039 -89434249 + (CA)n Simple_repeat Simple_repeat 2 39 0 9104 52 0 0 chr10 56155248 56157155 -89432133 - L1PA5 LINE L1 0 6154 4249 2301 255 85 5 chr10 56157159 56157762 -89431526 - MER82 DNA MER2_type -1 652 2 193 257 92 55 chr10 56157907 56158016 -89431272 - MIR SINE MIR -32 230 118 200 317 0 0 chr10 56158137 56158197 -89431091 + (CA)n Simple_repeat Simple_repeat 1 60 0 2175 134 14 25 chr10 56159478 56159844 -89429444 - THE1B LTR MaLR -2 362 1 2797 13 0 0 chr10 56161795 56162106 -89427182 - AluYa5 SINE Alu 0 311 1 324 228 13 16 chr10 56162150 56162241 -89427047 + MLT1J2 LTR MaLR 43 137 -310 535 267 113 71 chr10 56162520 56162945 -89426343 + MLT1J1 LTR MaLR 2 416 0 2203 113 0 16 chr10 56163017 56163326 -89425962 + AluSx SINE Alu 1 304 -8 2118 96 7 30 chr10 56163352 56163653 -89425635 + AluSp SINE Alu 1 294 -19 1480 183 3 71 chr10 56164412 56164734 -89424554 - AluJo SINE Alu -10 302 3 1242 227 84 23 chr10 56165109 56165452 -89423836 + MLT1A2 LTR MaLR 5 368 -6 21 57 0 0 chr10 56165735 56165770 -89423518 + AT_rich Low_complexity Low_complexity 1 35 0 2000 167 6 41 chr10 56165955 56166271 -89423017 + MLT1A1 LTR MaLR 11 337 -28 1879 164 113 18 chr10 56166271 56166662 -89422626 + MSTA LTR MaLR 1 428 0 8629 151 25 42 chr10 56166664 56168269 -89421019 + MSTA-int LTR MaLR 3 1580 0 1545 191 140 13 chr10 56168270 56168648 -89420640 + MSTA LTR MaLR 2 427 -1 2000 167 6 41 chr10 56168648 56168692 -89420596 + MLT1A1 LTR MaLR 337 363 -2 1303 160 38 11 chr10 56169183 56169445 -89419843 + L1MA6 LINE L1 6032 6300 0 421 212 24 0 chr10 56169558 56169643 -89419645 - MIR SINE MIR -65 197 111 425 203 27 16 chr10 56170732 56170878 -89418410 - MER20 DNA MER1_type -4 215 26 501 302 52 27 chr10 56171065 56171301 -89417987 + L1ME LINE L1 541 780 -5303 323 263 119 33 chr10 56171371 56171614 -89417674 + L1ME LINE L1 797 1060 -5023 237 108 0 0 chr10 56171752 56171789 -89417499 + (CA)n Simple_repeat Simple_repeat 2 38 0 1195 252 84 52 chr10 56172543 56172858 -89416430 + L1MC4 LINE L1 6449 6785 -1257 2121 13 0 0 chr10 56172858 56173095 -89416193 - AluYa5 SINE Alu -1 310 74 1195 252 84 52 chr10 56173095 56173243 -89416045 + L1MC4 LINE L1 6785 6927 -1115 227 230 40 14 chr10 56173802 56173876 -89415412 + (TATATG)n Simple_repeat Simple_repeat 5 80 0 33 56 0 0 chr10 56173987 56174041 -89415247 + AT_rich Low_complexity Low_complexity 1 54 0 306 363 55 17 chr10 56174638 56174875 -89414413 - L3 LINE CR1 -2 1575 1330 22 94 0 0 chr10 56175692 56175756 -89413532 + AT_rich Low_complexity Low_complexity 1 64 0 202 351 0 14 chr10 56175809 56175883 -89413405 + MIR SINE MIR 45 116 -97 42 36 0 0 chr10 56176003 56176059 -89413229 + AT_rich Low_complexity Low_complexity 1 56 0 322 325 32 8 chr10 56176148 56176271 -89413017 - L3 LINE CR1 -852 725 600 188 342 105 0 chr10 56176435 56176511 -89412777 + L2 LINE L2 3189 3272 0 2269 112 3 0 chr10 56177265 56177570 -89411718 + AluSx SINE Alu 1 306 -6 1267 269 111 14 chr10 56177837 56178279 -89411009 + MLT1E2 LTR MaLR 142 626 0 226 200 0 0 chr10 56179294 56179334 -89409954 - LTR16A LTR ERVL -9 441 402 21 0 0 0 chr10 56179570 56179591 -89409697 + AT_rich Low_complexity Low_complexity 1 21 0 378 300 110 73 chr10 56180744 56181071 -89408217 - L2 LINE L2 -76 3237 2899 1389 195 55 14 chr10 56181616 56182014 -89407274 + L1 LINE L1 4406 4811 -1335 237 312 106 48 chr10 56183567 56183756 -89405532 - MIR SINE MIR -19 243 44 244 330 78 39 chr10 56183808 56183911 -89405377 + MER91A DNA MER1_type 65 171 -25 304 282 30 46 chr10 56184265 56184396 -89404892 + HAL1 LINE L1 109 237 -2270 261 321 73 50 chr10 56184708 56184926 -89404362 + HAL1 LINE L1 640 862 -1645 733 231 52 55 chr10 56185577 56185867 -89403421 - L1ME2 LINE L1 -10 6154 5866 1777 164 13 3 chr10 56185877 56186175 -89403113 + AluJb SINE Alu 1 301 -11 332 216 10 0 chr10 56186175 56186272 -89403016 + (TA)n Simple_repeat Simple_repeat 1 98 0 2203 279 50 13 chr10 56186272 56187376 -89401912 - L1ME2 LINE L1 -734 5428 4292 497 226 24 40 chr10 56187379 56187503 -89401785 + LTR40c LTR ERVL 3 124 -341 * 762 154 15 7 chr10 56187502 56187638 -89401650 + LTR40a LTR ERVL 380 516 -3 314 238 0 12 chr10 56187647 56187727 -89401561 - L1ME2 LINE L1 -1857 4289 4211 268 105 0 0 chr10 56187804 56187842 -89401446 + L1M2 LINE L1 5491 5528 -772 957 278 52 5 chr10 56187842 56188248 -89401040 - L1ME2 LINE L1 -1938 4208 3784 49 32 0 0 chr10 56190438 56190501 -89398787 + AT_rich Low_complexity Low_complexity 1 63 0 281 320 93 27 chr10 56190706 56190856 -89398432 - MIR SINE MIR -19 243 84 244 274 0 0 chr10 56191521 56191583 -89397705 + GA-rich Low_complexity Low_complexity 1 62 0 405 263 49 88 chr10 56191737 56191942 -89397346 + MIR SINE MIR 47 243 -19 220 118 73 15 chr10 56193370 56193438 -89395850 + (TA)n Simple_repeat Simple_repeat 2 73 0 189 0 0 0 chr10 56194668 56194689 -89394599 + (A)n Simple_repeat Simple_repeat 1 21 0 186 240 0 0 chr10 56195538 56195588 -89393700 + (CATATA)n Simple_repeat Simple_repeat 1 50 0 216 0 0 0 chr10 56196488 56196512 -89392776 + (CAAAAA)n Simple_repeat Simple_repeat 1 24 0 482 244 68 6 chr10 56197257 56197433 -89391855 + HsTC2 DNA Tc2 1635 1821 -77 1839 83 0 4 chr10 56197478 56197731 -89391557 - L1PA8 LINE L1 -5 6167 5916 243 0 0 0 chr10 56198275 56198302 -89390986 + (T)n Simple_repeat Simple_repeat 1 27 0 408 88 0 0 chr10 56198998 56199055 -89390233 + (CA)n Simple_repeat Simple_repeat 2 58 0 186 133 0 0 chr10 56200240 56200270 -89389018 + (TCTCCC)n Simple_repeat Simple_repeat 6 35 0 288 0 0 0 chr10 56200277 56200309 -89388979 + (TCC)n Simple_repeat Simple_repeat 3 34 0 234 91 0 0 chr10 56200552 56200585 -89388703 + (T)n Simple_repeat Simple_repeat 1 33 0 768 167 226 0 chr10 56201228 56201396 -89387892 + MER6B DNA MER2_type 4 209 -1 1997 99 7 7 chr10 56202415 56202699 -89386589 - AluSc SINE Alu -10 299 16 29 0 0 0 chr10 56203360 56203389 -89385899 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr10 56203637 56203666 -89385622 + AT_rich Low_complexity Low_complexity 1 29 0 629 152 9 0 chr10 56204347 56204452 -89384836 + Charlie5 DNA MER1_type 4 109 -2503 687 209 78 30 chr10 56204470 56204738 -89384550 + Charlie5 DNA MER1_type 2253 2533 -79 22 0 0 0 chr10 56205189 56205211 -89384077 + AT_rich Low_complexity Low_complexity 1 22 0 3497 198 24 22 chr10 56205302 56206126 -89383162 + LTR1B LTR ERV1 1 826 0 209 368 59 37 chr10 56206251 56206387 -89382901 - L2 LINE L2 -9 3263 3125 36 23 0 0 chr10 56207798 56207841 -89381447 + AT_rich Low_complexity Low_complexity 1 43 0 3349 114 12 21 chr10 56208046 56208562 -89380726 - MER9 LTR ERVK 0 511 1 2343 57 0 0 chr10 56208562 56208844 -89380444 - HERVK9 LTR ERVK 0 5916 5635 14883 80 3 1 chr10 56208940 56210860 -89378428 - HERVK9 LTR ERVK -282 5634 3711 12324 58 5 0 chr10 56210860 56212372 -89376916 - HERVK9 LTR ERVK -3130 2786 1268 3904 51 6 0 chr10 56212372 56212844 -89376444 - HERVK9 LTR ERVK -5324 592 118 7638 19 2 2 chr10 56212862 56214252 -89375036 - L1PA4 LINE L1 -3 6152 4764 3899 32 0 0 chr10 56214252 56214718 -89374570 + L1P LINE L1 4125 4590 -1556 805 113 8 16 chr10 56214718 56214842 -89374446 - HERVK9 LTR ERVK -5793 123 1 3516 115 0 8 chr10 56214842 56215357 -89373931 - MER9 LTR ERVK 0 511 1 1006 221 279 43 chr10 56215493 56215931 -89373357 + MLT1E1 LTR MaLR 1 541 -113 201 264 47 94 chr10 56216034 56216140 -89373148 + MIR SINE MIR 71 171 -91 301 344 114 35 chr10 56216349 56216867 -89372421 + L1MCc LINE L1 24 582 -5841 252 324 88 59 chr10 56217021 56217191 -89372097 + L1MCc LINE L1 824 998 -5425 1537 63 0 0 chr10 56217321 56217510 -89371778 - AluY SINE Alu 0 311 123 591 225 0 0 chr10 56217510 56217648 -89371640 + (TA)n Simple_repeat Simple_repeat 2 139 0 801 75 112 0 chr10 56217649 56217756 -89371532 - Alu SINE Alu -192 119 1 1315 210 163 22 chr10 56217788 56218192 -89371096 + MER65C LTR ERV1 1 461 0 2123 119 0 0 chr10 56219320 56219643 -89369645 - AluSg SINE Alu 0 310 1 612 245 94 0 chr10 56220739 56220931 -89368357 + L1MD1 LINE L1 4399 4608 -1538 694 249 20 15 chr10 56220935 56221132 -89368156 - L1MD1 LINE L1 -1212 4934 4737 3808 205 60 37 chr10 56221135 56222396 -89366892 + L1MD1 LINE L1 4941 6236 -6 2187 112 3 7 chr10 56222763 56223109 -89366179 - AluSg SINE Alu 0 310 1 351 45 0 0 chr10 56224155 56224199 -89365089 - AluYb8 SINE Alu -137 171 128 1267 221 0 8 chr10 56224215 56224469 -89364819 - AluJb SINE Alu -46 266 15 723 233 159 51 chr10 56224470 56224766 -89364522 - MER57A LTR ERV1 -17 386 59 2022 110 3 21 chr10 56225431 56225722 -89363566 + AluSg SINE Alu 1 286 -24 231 325 111 8 chr10 56225923 56226049 -89363239 - MIR SINE MIR -71 191 53 21 36 0 0 chr10 56226463 56226491 -89362797 + AT_rich Low_complexity Low_complexity 1 28 0 1745 98 8 0 chr10 56226491 56226746 -89362542 + L1PA10 LINE L1 5910 6166 -2 2114 121 7 3 chr10 56227006 56227304 -89361984 + AluSq SINE Alu 1 299 -14 207 0 0 0 chr10 56227581 56227604 -89361684 + (A)n Simple_repeat Simple_repeat 1 23 0 4331 184 29 27 chr10 56227846 56228185 -89361103 + L1PB4 LINE L1 4705 5042 -1114 2109 130 0 0 chr10 56228185 56228485 -89360803 + AluSx SINE Alu 3 302 -10 4331 184 29 27 chr10 56228485 56229251 -89360037 + L1PB4 LINE L1 5042 5822 -334 2471 62 3 3 chr10 56229251 56229560 -89359728 + AluY SINE Alu 1 309 -2 4331 184 29 27 chr10 56229560 56229896 -89359392 + L1PB4 LINE L1 5822 6156 0 231 260 0 0 chr10 56230080 56230130 -89359158 + (TG)n Simple_repeat Simple_repeat 1 50 0 1294 159 5 9 chr10 56230169 56230389 -89358899 - MLT2D LTR ERVL -195 219 1 315 0 0 0 chr10 56230396 56230431 -89358857 + (TG)n Simple_repeat Simple_repeat 2 36 0 444 330 75 5 chr10 56231022 56231210 -89358078 - LTR16C LTR ERVL -32 459 259 638 327 56 46 chr10 56231599 56232101 -89357187 - HERVL LTR ERVL -779 4875 4369 3501 55 0 13 chr10 56232335 56232789 -89356499 - LTR7 LTR ERV1 -2 448 1 275 144 11 178 chr10 56232818 56232908 -89356380 + MLT1H LTR MaLR 472 624 0 39 22 0 0 chr10 56233285 56233331 -89355957 + AT_rich Low_complexity Low_complexity 1 46 0 4311 85 13 0 chr10 56233333 56233935 -89355353 - L1MA1 LINE L1 -8 6294 5685 3612 57 11 0 chr10 56233937 56234396 -89354892 + L1PA5 LINE L1 5690 6153 -1 2878 148 9 10 chr10 56234388 56235182 -89354106 - L1MA1 LINE L1 -602 5700 4909 * 184 330 97 82 chr10 56235293 56235448 -89353840 - MIR SINE MIR -1 261 101 1720 173 3 29 chr10 56235448 56235755 -89353533 + AluJo SINE Alu 1 299 -13 184 330 97 82 chr10 56235755 56235805 -89353483 - MIR SINE MIR -161 101 53 503 111 12 0 chr10 56236266 56236347 -89352941 + AluS SINE Alu 1 82 -230 281 285 34 2 chr10 56237847 56237950 -89351338 + MIR SINE MIR 50 154 -64 1428 239 142 22 chr10 56238879 56239323 -89349965 + MLT1D LTR MaLR 1 497 -8 407 277 17 0 chr10 56239324 56239443 -89349845 + MLT1D-int LTR MaLR 5 125 -1246 201 218 0 36 chr10 56239447 56239502 -89349786 + (TATATG)n Simple_repeat Simple_repeat 6 58 0 295 208 19 0 chr10 56239657 56239710 -89349578 + Tigger5 DNA MER2_type 2 55 -2268 * 417 192 0 0 chr10 56239679 56239752 -89349536 + Tigger5 DNA MER2_type 2251 2323 0 303 203 78 0 chr10 56239752 56239816 -89349472 + Tigger5 DNA MER2_type 2254 2322 -1 251 340 82 36 chr10 56239843 56240037 -89349251 - MIR SINE MIR -58 204 2 2070 164 113 15 chr10 56240696 56241164 -89348124 - MER34 LTR ERV1 -2 540 27 300 70 0 0 chr10 56242016 56242059 -89347229 + (TG)n Simple_repeat Simple_repeat 2 44 0 181 299 92 76 chr10 56242149 56242333 -89346955 + MIR3 SINE MIR 17 203 -5 36244 95 16 9 chr10 56243650 56249753 -89339535 + L1PA6 LINE L1 16 6154 0 231 400 16 0 chr10 56250680 56250805 -89338483 - L2 LINE L2 -256 3016 2890 235 330 113 30 chr10 56251109 56251339 -89337949 - L2 LINE L2 -804 2510 2262 295 308 0 0 chr10 56251351 56251442 -89337846 + MER91A DNA MER1_type 59 149 -47 224 337 40 46 chr10 56251660 56251835 -89337453 + MIR SINE MIR 89 262 0 1622 210 188 5 chr10 56252007 56252407 -89336881 + MLT1D LTR MaLR 1 473 -32 2420 66 0 34 chr10 56252891 56253211 -89336077 + AluY SINE Alu 1 309 -2 186 43 0 0 chr10 56253226 56253249 -89336039 + (GA)n Simple_repeat Simple_repeat 2 24 0 2580 220 53 36 chr10 56253381 56254055 -89335233 - MER76 LTR ERV -2 686 1 333 0 0 0 chr10 56254403 56254440 -89334848 + (TA)n Simple_repeat Simple_repeat 1 37 0 414 0 0 0 chr10 56254676 56254722 -89334566 + (TA)n Simple_repeat Simple_repeat 1 46 0 1262 68 19 0 chr10 56255001 56255163 -89334125 - AluY SINE Alu -12 299 135 481 125 0 0 chr10 56255315 56255387 -89333901 - AluS SINE Alu -239 72 1 405 32 11 95 chr10 56255416 56255511 -89333777 + AluY SINE Alu 2 88 -230 215 215 28 19 chr10 56255737 56255844 -89333444 + CT-rich Low_complexity Low_complexity 1 108 0 489 302 14 34 chr10 56255858 56256527 -89332761 + CT-rich Low_complexity Low_complexity 1 656 0 195 42 0 0 chr10 56259460 56259484 -89329804 + (A)n Simple_repeat Simple_repeat 1 24 0 282 56 0 0 chr10 56261600 56261636 -89327652 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 12540 80 7 20 chr10 56262572 56264400 -89324888 - HERVH LTR ERV1 -4866 2847 1044 248 256 36 15 chr10 56264458 56264595 -89324693 + (CCGCT)n Simple_repeat Simple_repeat 4 143 0 233 306 34 34 chr10 56264550 56264697 -89324591 + SUBTEL_sa Satellite Satellite 24 170 -4 * 1171 282 48 27 chr10 56265681 56266093 -89323195 + MER77 LTR ERV1 179 599 -6 260 303 38 53 chr10 56267835 56267926 -89321362 + MIR SINE MIR 102 192 -70 539 283 5 42 chr10 56267926 56268117 -89321171 + MER5A DNA MER1_type 5 188 -1 260 303 38 53 chr10 56268117 56268157 -89321131 + MIR SINE MIR 192 231 -31 27 29 0 0 chr10 56269514 56269548 -89319740 + AT_rich Low_complexity Low_complexity 1 34 0 906 193 100 135 chr10 56269836 56270318 -89318970 - MER4C LTR ERV1 0 465 1 359 315 0 14 chr10 56270537 56270680 -89318608 + GA-rich Low_complexity Low_complexity 3 143 0 1555 219 45 33 chr10 56271298 56271695 -89317593 + MER67D LTR ERV1 1 402 -112 25 51 0 0 chr10 56272065 56272104 -89317184 + AT_rich Low_complexity Low_complexity 1 39 0 2273 97 23 0 chr10 56272111 56272411 -89316877 + AluSc SINE Alu 1 307 -2 385 298 62 28 chr10 56273003 56273181 -89316107 + MIR SINE MIR 61 244 -18 * 451 336 121 27 chr10 56273180 56273620 -89315668 - L3 LINE CR1 -195 1382 902 72 47 0 0 chr10 56273961 56274068 -89315220 + AT_rich Low_complexity Low_complexity 1 107 0 22 35 0 0 chr10 56274121 56274150 -89315138 + AT_rich Low_complexity Low_complexity 1 29 0 32 26 0 0 chr10 56274234 56274273 -89315015 + AT_rich Low_complexity Low_complexity 1 39 0 340 357 25 19 chr10 56274554 56274711 -89314577 + MIR SINE MIR 30 187 -75 235 326 58 58 chr10 56275203 56275375 -89313913 - MIR SINE MIR -25 237 66 24 0 0 0 chr10 56275847 56275871 -89313417 + AT_rich Low_complexity Low_complexity 1 24 0 1976 100 0 4 chr10 56275872 56276132 -89313156 - AluSq SINE Alu -22 291 33 252 59 88 0 chr10 56276837 56276905 -89312383 + (TA)n Simple_repeat Simple_repeat 1 74 0 893 184 19 29 chr10 56277700 56277906 -89311382 + MER3 DNA MER1_type 6 209 0 2037 107 0 0 chr10 56278452 56278723 -89310565 - AluSc SINE Alu -8 301 31 23 33 0 0 chr10 56279807 56279837 -89309451 + AT_rich Low_complexity Low_complexity 1 30 0 2299 108 3 0 chr10 56280722 56281027 -89308261 - AluSx SINE Alu -6 306 1 180 382 22 0 chr10 56282032 56282121 -89307167 - L2 LINE L2 -470 2844 2754 1724 149 158 104 chr10 56282134 56282692 -89306596 + LTR4 LTR ERV1 1 588 0 445 196 9 0 chr10 56283953 56284065 -89305223 + L1M4 LINE L1 4955 5067 -1079 428 294 91 80 chr10 56284080 56284729 -89304559 - L1M4 LINE L1 -5854 688 33 23 0 0 0 chr10 56286280 56286303 -89302985 + AT_rich Low_complexity Low_complexity 1 23 0 393 22 0 0 chr10 56286544 56286590 -89302698 + (CA)n Simple_repeat Simple_repeat 1 46 0 235 139 56 83 chr10 56287261 56287333 -89301955 - MER103 DNA DNA -4 162 93 222 232 24 24 chr10 56287625 56287707 -89301581 + (TA)n Simple_repeat Simple_repeat 1 82 0 58 54 0 0 chr10 56288180 56288273 -89301015 + AT_rich Low_complexity Low_complexity 1 93 0 741 203 33 0 chr10 56288444 56288597 -89300691 - MLT2E LTR ERVL 0 628 471 738 333 22 25 chr10 56288670 56288946 -89300342 - MLT2E LTR ERVL -326 302 28 272 241 90 83 chr10 56289097 56289242 -89300046 + MIR SINE MIR 74 219 -43 207 0 0 0 chr10 56289649 56289672 -89299616 + (GA)n Simple_repeat Simple_repeat 1 23 0 3885 178 22 6 chr10 56290545 56291236 -89298052 + MER44D DNA MER2_type 3 704 -1 4723 252 43 27 chr10 56291505 56293764 -89295524 - L1PBa LINE L1 -5220 1643 186 249 275 29 14 chr10 56294307 56294376 -89294912 + MIR SINE MIR 20 89 -119 832 253 189 9 chr10 56294670 56295211 -89294077 - L1ME3 LINE L1 -48 6114 5477 2233 92 7 3 chr10 56295291 56295585 -89293703 - AluSp SINE Alu -17 296 2 276 254 52 30 chr10 56295776 56295910 -89293378 - L1MA10 LINE L1 -3 6331 6195 27 29 0 0 chr10 56297192 56297226 -89292062 + AT_rich Low_complexity Low_complexity 1 34 0 581 289 93 10 chr10 56297429 56297633 -89291655 - MIR SINE MIR -21 241 21 542 271 0 20 chr10 56297867 56298018 -89291270 - MIR SINE MIR -39 223 76 276 224 0 0 chr10 56298192 56298259 -89291029 + (TA)n Simple_repeat Simple_repeat 2 68 0 1157 207 0 11 chr10 56298487 56298748 -89290540 - L1 LINE L1 -2248 3898 3641 375 23 0 0 chr10 56298748 56298792 -89290496 + (CA)n Simple_repeat Simple_repeat 1 44 0 235 220 0 0 chr10 56298792 56298842 -89290446 + L1MC4 LINE L1 6653 6702 -1340 10558 230 30 39 chr10 56298844 56299866 -89289422 - L1P5 LINE L1 -371 6496 5466 2471 108 11 24 chr10 56299866 56300235 -89289053 + THE1B LTR MaLR 1 364 0 10558 230 30 39 chr10 56300235 56302543 -89286745 - L1P5 LINE L1 -1401 5466 3354 2139 147 0 27 chr10 56302543 56302918 -89286370 + L1PB1 LINE L1 5785 6149 -2 10558 230 30 39 chr10 56302918 56304039 -89285249 - L1P5 LINE L1 -3513 3354 2224 10744 133 129 18 chr10 56304320 56304331 -89284957 - L1P5 LINE L1 -4689 2174 2166 1723 112 23 0 chr10 56304331 56304589 -89284699 - L1PA8 LINE L1 -2 6170 5907 10744 133 129 18 chr10 56304589 56306533 -89282755 - L1P5 LINE L1 -4697 2166 3 28 29 0 0 chr10 56307896 56307931 -89281357 + AT_rich Low_complexity Low_complexity 1 35 0 211 125 25 0 chr10 56308037 56308077 -89281211 + (TTTG)n Simple_repeat Simple_repeat 4 44 0 1335 199 34 24 chr10 56308088 56308267 -89281021 - AluJb SINE Alu -10 302 117 247 24 0 48 chr10 56308267 56308309 -89280979 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 1335 199 34 24 chr10 56308309 56308421 -89280867 - AluJb SINE Alu -195 117 8 22 35 0 0 chr10 56308863 56308892 -89280396 + AT_rich Low_complexity Low_complexity 1 29 0 2101 148 33 19 chr10 56309232 56309591 -89279697 - THE1B LTR MaLR 0 364 1 1677 186 42 0 chr10 56309877 56310162 -89279126 - AluJo SINE Alu -15 297 1 21 0 0 0 chr10 56310688 56310709 -89278579 + AT_rich Low_complexity Low_complexity 1 21 0 190 239 0 22 chr10 56311215 56311261 -89278027 + L2 LINE L2 2681 2725 -589 190 293 27 0 chr10 56313078 56313153 -89276135 - MIR SINE MIR 0 262 186 253 256 100 11 chr10 56313237 56313327 -89275961 + MER5A DNA MER1_type 86 183 -6 220 359 39 0 chr10 56313305 56313408 -89275880 - MIR SINE MIR -32 230 124 * 203 237 0 0 chr10 56315506 56315544 -89273744 + polypurine Low_complexity Low_complexity 2 39 0 3076 140 18 10 chr10 56315900 56316407 -89272881 + MER75 DNA T2_type 2 512 -2 615 182 35 6 chr10 56316814 56316984 -89272304 + GA-rich Low_complexity Low_complexity 2 176 0 225 93 93 0 chr10 56317270 56317313 -89271975 + L1MC4 LINE L1 6656 6702 -1340 974 160 27 37 chr10 56317951 56318139 -89271149 - AluSc SINE Alu -5 304 119 1308 136 45 0 chr10 56318548 56318768 -89270520 - MER30 DNA MER1_type 0 230 1 344 303 87 29 chr10 56318962 56319203 -89270085 + L1M4 LINE L1 4512 4766 -1380 21 36 0 0 chr10 56319239 56319267 -89270021 + AT_rich Low_complexity Low_complexity 1 28 0 2358 78 3 3 chr10 56321253 56321560 -89267728 + AluSx SINE Alu 1 307 -5 2179 156 89 26 chr10 56322405 56322866 -89266422 - LTR2B LTR ERV1 0 490 1 183 414 15 8 chr10 56323033 56323166 -89266122 + MIR SINE MIR 5 138 -124 453 286 160 0 chr10 56323854 56324029 -89265259 + MIR SINE MIR 47 249 -13 193 204 159 0 chr10 56324019 56324063 -89265225 - L2 LINE L2 -9 3304 3254 * 249 197 0 0 chr10 56324337 56324398 -89264890 + (TG)n Simple_repeat Simple_repeat 1 61 0 398 297 31 16 chr10 56324715 56324843 -89264445 - L2 LINE L2 -10 3303 3174 541 288 65 11 chr10 56326352 56326536 -89262752 - MIR SINE MIR -3 259 66 1078 228 35 8 chr10 56326651 56326906 -89262382 - MLT1B LTR MaLR -126 264 3 853 264 119 4 chr10 56327222 56327499 -89261789 + MLT1F LTR MaLR 179 487 -55 24 47 0 47 chr10 56328069 56328133 -89261155 + AT_rich Low_complexity Low_complexity 1 61 0 203 286 26 0 chr10 56328180 56328257 -89261031 + GA-rich Low_complexity Low_complexity 2 80 0 2558 45 7 0 chr10 56328349 56328658 -89260630 - AluY SINE Alu 0 311 1 217 296 34 45 chr10 56329075 56329163 -89260125 + L2 LINE L2 3186 3272 0 432 37 0 0 chr10 56329171 56329225 -89260063 + (TG)n Simple_repeat Simple_repeat 1 54 0 1830 202 6 6 chr10 56329707 56330054 -89259234 - MLT1A1 LTR MaLR -18 347 1 1687 142 225 0 chr10 56330277 56330623 -89258665 - MSTA LTR MaLR 0 428 5 8899 180 15 7 chr10 56330633 56331871 -89257417 - MSTA-int LTR MaLR 0 1651 397 2122 185 31 124 chr10 56331871 56332546 -89256742 - LTR9 LTR ERV1 0 612 1 8899 180 15 7 chr10 56332546 56332923 -89256365 - MSTA-int LTR MaLR -1254 397 24 1561 181 35 48 chr10 56332955 56333325 -89255963 - MSTA LTR MaLR -13 415 1 21 0 0 0 chr10 56333612 56333633 -89255655 + AT_rich Low_complexity Low_complexity 1 21 0 228 163 0 0 chr10 56334792 56334835 -89254453 + CT-rich Low_complexity Low_complexity 3 45 0 250 383 9 17 chr10 56335087 56335202 -89254086 - MIR SINE MIR -134 128 15 220 346 96 42 chr10 56335638 56335898 -89253390 + L3 LINE CR1 647 920 -657 237 65 0 0 chr10 56336621 56336652 -89252636 + (TC)n Simple_repeat Simple_repeat 2 32 0 28 0 0 0 chr10 56337357 56337385 -89251903 + AT_rich Low_complexity Low_complexity 1 28 0 25 51 0 0 chr10 56338019 56338058 -89251230 + AT_rich Low_complexity Low_complexity 1 39 0 1843 113 91 4 chr10 56340026 56340300 -89248988 - AluSx SINE Alu -14 298 1 1198 213 155 79 chr10 56341091 56341621 -89247667 - L1ME1 LINE L1 -9 6157 5585 462 216 11 0 chr10 56341629 56341717 -89247571 + 5S rRNA rRNA 1 89 -32 603 215 62 105 chr10 56341718 56342017 -89247271 - L1ME1 LINE L1 -574 5588 5298 2323 59 23 7 chr10 56342094 56342399 -89246889 + AluY SINE Alu 1 310 -1 453 216 113 42 chr10 56342411 56342624 -89246664 - L1ME1 LINE L1 -927 5219 4992 3234 219 79 57 chr10 56342725 56343201 -89246087 - L1MD2 LINE L1 -14 6345 5881 1894 134 7 7 chr10 56343201 56343492 -89245796 - AluSx SINE Alu -20 292 2 3234 219 79 57 chr10 56343492 56345245 -89244043 - L1MD2 LINE L1 -478 5881 3951 1946 158 0 0 chr10 56345901 56346192 -89243096 - AluSx SINE Alu -19 293 3 1343 278 34 37 chr10 56346209 56346799 -89242489 + L1M4 LINE L1 3362 3949 -2197 1641 229 89 47 chr10 56346913 56347530 -89241758 + LTR48B LTR ERV1 1 643 -1 33 56 0 0 chr10 56348081 56348135 -89241153 + AT_rich Low_complexity Low_complexity 1 54 0 29 0 0 0 chr10 56348851 56348880 -89240408 + AT_rich Low_complexity Low_complexity 1 29 0 3515 101 18 34 chr10 56348884 56349438 -89239850 + L1PA13 LINE L1 5608 6152 -11 233 256 0 24 chr10 56349645 56349727 -89239561 + L1M4 LINE L1 46 125 -6417 261 0 0 0 chr10 56350195 56350224 -89239064 + (CA)n Simple_repeat Simple_repeat 2 30 0 22 35 0 0 chr10 56350329 56350358 -89238930 + AT_rich Low_complexity Low_complexity 1 29 0 25 31 0 0 chr10 56350378 56350410 -89238878 + AT_rich Low_complexity Low_complexity 1 32 0 222 331 80 13 chr10 56351547 56351698 -89237590 - MIR SINE MIR -8 254 94 1514 206 3 16 chr10 56351700 56352006 -89237282 + AluJb SINE Alu 1 302 -10 198 0 0 0 chr10 56352099 56352121 -89237167 + (A)n Simple_repeat Simple_repeat 1 22 0 2780 19 0 0 chr10 56352195 56352505 -89236783 - AluYb8 SINE Alu -8 310 1 23 0 0 0 chr10 56353137 56353160 -89236128 + AT_rich Low_complexity Low_complexity 1 23 0 288 0 0 0 chr10 56353213 56353245 -89236043 + (CA)n Simple_repeat Simple_repeat 1 32 0 180 77 0 0 chr10 56353245 56353271 -89236017 + (GA)n Simple_repeat Simple_repeat 1 26 0 753 259 39 21 chr10 56353517 56353799 -89235489 - L1M4 LINE L1 -1594 5347 5061 949 256 77 25 chr10 56353902 56354554 -89234734 - L1MEc LINE L1 -3712 3229 2575 767 266 72 5 chr10 56354558 56354765 -89234523 + MER58A DNA MER1_type 2 222 -2 889 283 94 60 chr10 56354769 56355196 -89234092 - L1MEc LINE L1 -4541 2581 2123 2499 54 0 10 chr10 56355196 56355510 -89233778 - AluY SINE Alu 0 311 1 889 283 94 60 chr10 56355510 56355744 -89233544 - L1MEc LINE L1 -4999 2123 1898 215 224 0 40 chr10 56355802 56355878 -89233410 + T-rich Low_complexity Low_complexity 2 74 0 641 229 110 95 chr10 56355961 56356298 -89232990 - L1MEc LINE L1 -5049 1374 1033 1147 265 126 44 chr10 56356311 56357339 -89231949 + L1ME2 LINE L1 4926 6029 -135 1648 236 64 27 chr10 56357531 56358018 -89231270 + MLT1D LTR MaLR 1 505 0 353 322 50 0 chr10 56358179 56358300 -89230988 - MIR3 SINE MIR 0 208 82 224 229 29 14 chr10 56359312 56359382 -89229906 + (TA)n Simple_repeat Simple_repeat 1 71 0 228 143 0 0 chr10 56359403 56359445 -89229843 + (TG)n Simple_repeat Simple_repeat 1 42 0 2983 118 56 70 chr10 56359871 56360488 -89228800 - MER4B LTR ERV1 -2 777 1 1897 146 14 0 chr10 56360738 56361025 -89228263 + LTR58 LTR ERV1 1 291 -388 458 238 41 25 chr10 56361012 56361134 -89228154 + LTR58 LTR ERV1 441 564 -115 * 2510 82 0 3 chr10 56361203 56361543 -89227745 - L1PB1 LINE L1 -8 6143 5805 379 78 0 0 chr10 56361543 56361594 -89227694 - AluS SINE Alu -239 64 14 673 96 43 9 chr10 56361605 56361720 -89227568 - L1PB1 LINE L1 -350 5801 5683 631 155 0 43 chr10 56361725 56361841 -89227447 + LTR58 LTR ERV1 569 679 0 2372 98 3 0 chr10 56362064 56362370 -89226918 - AluSp SINE Alu -6 307 1 23 54 0 0 chr10 56362537 56362574 -89226714 + AT_rich Low_complexity Low_complexity 1 37 0 25 65 0 0 chr10 56363636 56363682 -89225606 + AT_rich Low_complexity Low_complexity 1 46 0 21 36 0 0 chr10 56364478 56364506 -89224782 + AT_rich Low_complexity Low_complexity 1 28 0 189 0 0 0 chr10 56364731 56364752 -89224536 + (TTTTG)n Simple_repeat Simple_repeat 5 25 0 371 352 106 10 chr10 56364752 56364951 -89224337 + MLT2E LTR ERVL 70 287 -341 1357 245 25 54 chr10 56365561 56366042 -89223246 + MLT1C LTR MaLR 1 467 0 454 210 22 72 chr10 56366708 56366846 -89222442 - MER57A LTR ERV1 0 403 273 791 102 0 0 chr10 56366865 56366973 -89222315 - MER57A LTR ERV1 -295 108 1 444 180 0 22 chr10 56366973 56367062 -89222226 - MER57A-int LTR ERV1 0 7537 7451 687 174 105 110 chr10 56367076 56367408 -89221880 - LTR54 LTR ERV1 -111 387 1 3687 103 0 6 chr10 56368595 56369109 -89220179 - MER9 LTR ERVK 0 511 1 2260 63 0 17 chr10 56369109 56369396 -89219892 - HERVK9 LTR ERVK 0 5916 5635 3501 117 0 0 chr10 56369563 56370074 -89219214 - THE1B-int LTR MaLR -1065 515 5 2193 139 19 25 chr10 56370078 56370444 -89218844 - THE1B LTR MaLR 0 364 1 2030 192 146 105 chr10 56370513 56371353 -89217935 - LTR28 LTR ERV1 0 1020 2 2206 169 14 35 chr10 56372781 56373208 -89216080 - MSTB1 LTR MaLR 0 432 15 508 171 0 76 chr10 56373225 56373296 -89215992 - Tigger7 DNA MER2_type -6 2481 2419 2696 164 87 18 chr10 56373296 56373851 -89215437 + LTR49 LTR ERV1 1 593 -2 508 171 0 76 chr10 56373851 56373884 -89215404 - Tigger7 DNA MER2_type -68 2419 2385 * 1350 235 11 0 chr10 56373879 56374143 -89215145 - Tigger7 DNA MER2_type -2220 267 1 30 69 0 0 chr10 56374517 56374575 -89214713 + AT_rich Low_complexity Low_complexity 1 58 0 2038 148 0 3 chr10 56374577 56374887 -89214401 + AluSq SINE Alu 3 311 -2 30 45 0 0 chr10 56374899 56374943 -89214345 + AT_rich Low_complexity Low_complexity 1 44 0 1988 184 16 100 chr10 56375069 56375630 -89213658 + MER67D LTR ERV1 1 514 0 331 329 24 70 chr10 56375651 56375864 -89213424 + MIR SINE MIR 2 204 -58 3433 51 2 7 chr10 56376187 56376637 -89212651 - LTR7 LTR ERV1 -2 448 1 2509 84 45 13 chr10 56376637 56377017 -89212271 - HERVH LTR ERV1 0 7713 7322 1335 122 23 14 chr10 56377015 56377236 -89212052 - HERVH LTR ERV1 -1894 5819 5597 * 989 197 0 0 chr10 56377233 56377411 -89211877 - HERVH LTR ERV1 -2564 5149 4972 * 41908 43 22 1 chr10 56377471 56383489 -89205799 - L1PA3 LINE L1 -4 6151 8 3109 133 33 2 chr10 56383494 56383977 -89205311 - HERVH LTR ERV1 -2728 4985 4488 6051 94 1 2 chr10 56383979 56384834 -89204454 - HERVH LTR ERV1 -3720 3993 3140 * 19717 94 25 13 chr10 56384813 56387730 -89201558 - HERVH LTR ERV1 -4718 2995 44 3460 53 2 7 chr10 56387743 56388193 -89201095 - LTR7 LTR ERV1 -2 448 1 423 296 128 6 chr10 56388286 56388458 -89200830 - MIR SINE MIR -13 249 57 564 270 185 11 chr10 56388666 56388936 -89200352 + L2 LINE L2 2190 2506 -808 454 314 80 69 chr10 56388955 56389387 -89199901 + L2 LINE L2 2780 3215 -98 248 299 24 0 chr10 56389417 56389582 -89199706 - L1MEc LINE L1 -3120 3095 2745 477 275 131 14 chr10 56389820 56390219 -89199069 - L1MEc LINE L1 -3757 2471 2035 22 70 0 0 chr10 56390426 56390469 -89198819 + AT_rich Low_complexity Low_complexity 1 43 0 847 114 14 7 chr10 56391838 56391978 -89197310 - LTR49 LTR ERV1 -454 141 1 5152 154 13 24 chr10 56391984 56392954 -89196334 - LTR49-int LTR ERV1 -1 6330 5371 2619 178 9 2 chr10 56392965 56393431 -89195857 - L1PB4 LINE L1 -3 6153 5685 2584 245 29 52 chr10 56393433 56394424 -89194864 + L1M4 LINE L1 2113 3081 -3065 537 88 0 16 chr10 56394426 56394665 -89194623 + AluSg SINE Alu 1 307 -2 1463 249 10 72 chr10 56394729 56395216 -89194072 + MLT2B1 LTR ERVL 5 461 -59 228 122 0 0 chr10 56395216 56395257 -89194031 + (CA)n Simple_repeat Simple_repeat 1 41 0 554 217 0 0 chr10 56395289 56395404 -89193884 + MLT1B-int LTR MaLR 1 115 -1256 1870 257 51 97 chr10 56395420 56396489 -89192799 + MLT1B-int LTR MaLR 338 1357 -14 839 232 64 103 chr10 56396508 56396659 -89192629 + MLT1B LTR MaLR 6 161 -229 1817 169 3 10 chr10 56396659 56396973 -89192315 - AluSx SINE Alu 0 312 1 839 232 64 103 chr10 56396973 56397209 -89192079 + MLT1B LTR MaLR 161 378 -12 1371 97 0 27 chr10 56398138 56398324 -89190964 + AluSg/x SINE Alu 101 281 -31 186 244 156 0 chr10 56398465 56398510 -89190778 + MIR SINE MIR 194 245 -17 2348 83 0 6 chr10 56399119 56399432 -89189856 + AluY SINE Alu 1 311 0 263 56 0 0 chr10 56399765 56399801 -89189487 - MADE1 DNA Mariner -44 36 1 1859 166 102 33 chr10 56399801 56400162 -89189126 + MER47B DNA MER2_type 32 417 -1 231 216 20 0 chr10 56400713 56400764 -89188524 - L2 LINE L2 -214 3058 3007 208 314 43 91 chr10 56400805 56401015 -89188273 - L2 LINE L2 -906 2408 2209 775 273 23 36 chr10 56401035 56401049 -89188239 - MER58A DNA MER1_type -2196 224 211 6993 48 31 3 chr10 56401049 56401919 -89187369 + MER11D LTR ERVK 1 894 -3 775 273 23 36 chr10 56401919 56402124 -89187164 - MER58A DNA MER1_type -2209 211 8 2322 82 0 3 chr10 56402378 56402670 -89186618 + AluY SINE Alu 4 294 -17 232 368 95 0 chr10 56403861 56403956 -89185332 - MER91A DNA MER1_type -36 160 57 27 0 0 0 chr10 56404986 56405013 -89184275 + AT_rich Low_complexity Low_complexity 1 27 0 42 36 0 0 chr10 56405786 56405842 -89183446 + AT_rich Low_complexity Low_complexity 1 56 0 2287 104 48 31 chr10 56405922 56406278 -89183010 + THE1B LTR MaLR 3 364 0 803 299 81 76 chr10 56406526 56407263 -89182025 + L1ME1 LINE L1 54 794 -5602 1080 213 11 118 chr10 56407289 56407636 -89181652 + MLT1A1 LTR MaLR 56 365 0 269 258 47 102 chr10 56407636 56408000 -89181288 + L1ME1 LINE L1 823 1166 -5230 2549 263 85 47 chr10 56408379 56409644 -89179644 + L1ME1 LINE L1 2910 4125 -2110 2570 49 0 0 chr10 56409644 56409949 -89179339 - AluY SINE Alu -6 305 1 2549 263 85 47 chr10 56409949 56410482 -89178806 + L1ME1 LINE L1 4125 4636 -1599 5373 69 24 12 chr10 56410482 56411239 -89178049 - MER4E LTR ERV1 0 766 1 2549 263 85 47 chr10 56411239 56411700 -89177588 + L1ME1 LINE L1 4636 5078 -1157 2243 114 0 7 chr10 56411700 56412008 -89177280 + AluSq SINE Alu 1 306 -7 2549 263 85 47 chr10 56412008 56412912 -89176376 + L1ME1 LINE L1 5078 6230 -5 26 0 0 0 chr10 56413082 56413108 -89176180 + AT_rich Low_complexity Low_complexity 1 26 0 634 281 67 6 chr10 56413805 56413983 -89175305 - MER58A DNA MER1_type -34 190 2 847 276 75 26 chr10 56413987 56414643 -89174645 + L1MEc LINE L1 1849 2505 -3710 8533 187 15 8 chr10 56415204 56415561 -89173727 - L1PB1 LINE L1 -2 6149 5796 554 71 12 0 chr10 56415561 56415645 -89173643 + (TCTA)n Simple_repeat Simple_repeat 1 85 0 8533 187 15 8 chr10 56415645 56418094 -89171194 - L1PB1 LINE L1 -355 5796 3321 2206 155 5 30 chr10 56418098 56418466 -89170822 - THE1B LTR MaLR -5 359 1 9395 119 7 1 chr10 56418466 56419794 -89169494 - THE1B-int LTR MaLR 0 1580 245 22 106 0 0 chr10 56421868 56421953 -89167335 + AT_rich Low_complexity Low_complexity 1 85 0 2041 67 0 45 chr10 56422623 56422913 -89166375 + AluY SINE Alu 25 302 0 1859 169 7 10 chr10 56423309 56423617 -89165671 - AluJb SINE Alu 0 312 6 249 265 69 29 chr10 56423629 56423731 -89165557 - LTR16C LTR ERVL -23 468 363 309 318 146 46 chr10 56424140 56424291 -89164997 - L2 LINE L2 -1 3271 3106 2127 90 0 0 chr10 56424936 56425203 -89164085 + AluSx SINE Alu 1 267 -45 389 361 27 0 chr10 56425306 56425489 -89163799 + MIR SINE MIR 75 262 0 1821 154 7 16 chr10 56425656 56425962 -89163326 - AluJo SINE Alu 0 312 10 23 54 0 0 chr10 56428114 56428151 -89161137 + AT_rich Low_complexity Low_complexity 1 37 0 1856 154 27 12 chr10 56428167 56428505 -89160783 - MER47A DNA MER2_type -4 362 20 186 103 0 0 chr10 56428627 56428656 -89160632 + (GA)n Simple_repeat Simple_repeat 2 30 0 22 0 0 0 chr10 56429531 56429553 -89159735 + AT_rich Low_complexity Low_complexity 1 22 0 213 209 0 0 chr10 56430342 56430409 -89158879 + (CA)n Simple_repeat Simple_repeat 2 68 0 298 305 103 29 chr10 56430411 56430585 -89158703 + MLT1L LTR MaLR 414 600 -15 21 57 0 0 chr10 56430790 56430825 -89158463 + AT_rich Low_complexity Low_complexity 1 35 0 581 353 38 75 chr10 56431170 56431833 -89157455 - L2 LINE L2 -585 2729 2092 4874 166 29 52 chr10 56432312 56434200 -89155088 - L1MA8 LINE L1 -6 6285 4448 3176 184 62 34 chr10 56434382 56435081 -89154207 - MER50 LTR ERV1 -16 718 1 4787 117 39 78 chr10 56435314 56435800 -89153488 + MER4D LTR ERV1 1 435 -468 2023 119 14 0 chr10 56435800 56436094 -89153194 + AluSx SINE Alu 1 298 -14 4787 117 39 78 chr10 56436094 56436546 -89152742 + MER4D LTR ERV1 435 903 0 352 333 37 0 chr10 56436658 56436793 -89152495 - MIR3 SINE MIR -9 199 60 191 185 0 19 chr10 56436917 56436971 -89152317 + (CATATA)n Simple_repeat Simple_repeat 4 56 0 327 113 0 0 chr10 56438197 56438250 -89151038 + (GA)n Simple_repeat Simple_repeat 2 54 0 588 283 108 15 chr10 56438361 56438862 -89150426 + L1MEc LINE L1 1129 1841 -4887 1031 175 65 13 chr10 56438880 56439109 -89150179 - L1 LINE L1 -865 5281 5041 4826 191 16 8 chr10 56439111 56440079 -89149209 + L1MA6 LINE L1 5325 6300 0 357 325 18 0 chr10 56440146 56440309 -89148979 + L1MEc LINE L1 1789 1954 -4885 1429 309 66 82 chr10 56440314 56441602 -89147686 + L1MCc LINE L1 -257 1009 -4899 458 294 28 9 chr10 56441727 56441980 -89147308 + L1MCc LINE L1 1068 1433 -4983 547 290 144 8 chr10 56441991 56442353 -89146935 + L1MCc LINE L1 2393 2803 -3623 316 191 73 9 chr10 56442362 56442472 -89146816 + Charlie5 DNA MER1_type 2426 2542 -70 22 0 0 0 chr10 56443348 56443370 -89145918 + AT_rich Low_complexity Low_complexity 1 22 0 234 0 0 0 chr10 56443880 56443906 -89145382 + (CA)n Simple_repeat Simple_repeat 2 27 0 878 251 72 11 chr10 56443928 56444207 -89145081 - L1ME3A LINE L1 -41 6129 5834 35 78 0 0 chr10 56444208 56444285 -89145003 + AT_rich Low_complexity Low_complexity 1 77 0 1329 246 27 16 chr10 56444285 56444651 -89144637 + MLT1A2 LTR MaLR 5 374 0 1107 244 97 73 chr10 56444696 56445463 -89143825 - L1ME3A LINE L1 -919 5227 4443 1323 234 31 59 chr10 56446214 56446893 -89142395 + L1M3 LINE L1 4812 5492 -706 1524 200 96 11 chr10 56447048 56447414 -89141874 + MLT1B LTR MaLR 1 390 0 21 36 0 0 chr10 56447868 56447896 -89141392 + AT_rich Low_complexity Low_complexity 1 28 0 2076 122 0 10 chr10 56447903 56448191 -89141097 + AluSx SINE Alu 1 285 -27 246 281 0 0 chr10 56449564 56449621 -89139667 + LTR40b LTR ERVL 1 57 -405 489 277 101 61 chr10 56449725 56450133 -89139155 + L1MEc LINE L1 2601 3024 -4098 485 316 45 14 chr10 56450146 56450437 -89138851 + L1MEc LINE L1 2980 3279 -3662 23 97 0 0 chr10 56450849 56450921 -89138367 + AT_rich Low_complexity Low_complexity 1 72 0 8759 223 20 88 chr10 56450925 56452810 -89136478 + L1PB1 LINE L1 1429 3442 -2709 2265 144 3 29 chr10 56452810 56453184 -89136104 + THE1B LTR MaLR 1 364 0 11223 106 7 1 chr10 56453185 56454754 -89134534 + THE1B-int LTR MaLR 2 1580 0 2268 147 5 30 chr10 56454754 56455122 -89134166 + THE1B LTR MaLR 1 359 -5 8759 223 20 88 chr10 56455122 56457589 -89131699 + L1PB1 LINE L1 3441 5770 -381 641 73 10 0 chr10 56457589 56457685 -89131603 + (TAGA)n Simple_repeat Simple_repeat 1 97 0 8759 223 20 88 chr10 56457685 56458041 -89131247 + L1PB1 LINE L1 5770 6149 -2 312 273 73 53 chr10 56458305 56458701 -89130587 + L1M4c LINE L1 974 1377 -5007 237 264 0 0 chr10 56459558 56459630 -89129658 + GA-rich Low_complexity Low_complexity 3 74 0 2336 92 3 3 chr10 56460574 56460878 -89128410 + AluSx SINE Alu 1 304 -8 1752 268 128 13 chr10 56461302 56462052 -89127236 + L1ME3A LINE L1 5325 6160 -10 460 296 47 58 chr10 56462576 56462833 -89126455 + Charlie8 DNA MER1_type 21 274 -2143 1256 157 61 137 chr10 56464129 56464614 -89124674 + MER4A LTR ERV1 1 260 -205 2094 146 47 16 chr10 56464614 56464978 -89124310 + THE1C LTR MaLR 1 375 0 1256 157 61 137 chr10 56464978 56465170 -89124118 + MER4A LTR ERV1 260 465 0 1354 204 60 51 chr10 56465573 56465633 -89123655 - MER67C LTR ERV1 -8 506 448 2182 127 0 0 chr10 56465633 56465941 -89123347 - AluSg SINE Alu -2 308 1 1354 204 60 51 chr10 56465941 56466425 -89122863 - MER67C LTR ERV1 -66 448 1 675 202 43 25 chr10 56466816 56466959 -89122329 + MLT1E LTR MaLR 25 157 -385 204 260 221 24 chr10 56467018 56467145 -89122143 + MIR3 SINE MIR 41 192 -16 5752 104 44 2 chr10 56467250 56468486 -89120802 + L1PA10 LINE L1 4879 6157 -11 207 186 0 0 chr10 56469021 56469064 -89120224 + (TATATG)n Simple_repeat Simple_repeat 3 45 0 4075 203 28 20 chr10 56469212 56469949 -89119339 - L1MC3 LINE L1 -8 7777 6872 2490 139 49 2 chr10 56469949 56470358 -89118930 + MSTA LTR MaLR 1 428 0 4075 203 28 20 chr10 56470358 56470865 -89118423 - L1MC3 LINE L1 -913 6872 6371 645 280 86 0 chr10 56470938 56471124 -89118164 + MER63A DNA MER1_type 2 203 -7 379 353 30 18 chr10 56471176 56471343 -89117945 + MIR3 SINE MIR 33 201 -7 1888 208 41 32 chr10 56471634 56472096 -89117192 + MLT1C LTR MaLR 1 466 -1 2240 211 62 42 chr10 56472191 56473800 -89115488 + L1MC1 LINE L1 4528 6332 -1 219 200 9 162 chr10 56474156 56474261 -89115027 - L2 LINE L2 0 3272 3184 212 320 0 62 chr10 56474658 56474755 -89114533 - MIR SINE MIR -87 175 85 23 0 0 0 chr10 56475177 56475200 -89114088 + AT_rich Low_complexity Low_complexity 1 23 0 304 309 49 43 chr10 56476319 56476481 -89112807 - MIR SINE MIR -56 206 44 21109 191 29 18 chr10 56476925 56477674 -89111614 - L1PA12 LINE L1 0 7606 6867 2214 104 6 28 chr10 56477674 56477991 -89111297 - AluSg SINE Alu 0 310 1 21109 191 29 18 chr10 56477991 56479549 -89109739 - L1PA12 LINE L1 -739 6867 5327 2426 80 0 0 chr10 56479549 56479850 -89109438 - AluY SINE Alu -10 301 1 21109 191 29 18 chr10 56479850 56480822 -89108466 - L1PA12 LINE L1 -2279 5327 4367 2041 142 3 3 chr10 56480822 56481131 -89108157 - AluSx SINE Alu -3 309 1 21109 191 29 18 chr10 56481131 56484294 -89104994 - L1PA12 LINE L1 -3239 4367 7 1606 182 20 14 chr10 56484447 56484743 -89104545 + AluJb SINE Alu 2 299 -13 26 88 0 0 chr10 56484865 56484933 -89104355 + AT_rich Low_complexity Low_complexity 1 68 0 301 153 51 17 chr10 56484951 56485010 -89104278 + MLT1E1 LTR MaLR 10 70 -584 285 280 190 45 chr10 56485992 56486303 -89102985 - MLT1I LTR MaLR -33 376 21 934 204 53 45 chr10 56487458 56487773 -89101515 - MER4C LTR ERV1 -3 695 276 1673 129 27 89 chr10 56487776 56488147 -89101141 - MER4A LTR ERV1 -316 348 1 3144 156 50 71 chr10 56488684 56489398 -89099890 + LTR34 LTR ERV1 1 699 0 1775 164 48 0 chr10 56489561 56489854 -89099434 + AluSx SINE Alu 3 309 -3 2484 58 0 0 chr10 56489894 56490185 -89099103 + AluY SINE Alu 1 291 -20 1138 148 21 0 chr10 56490298 56490487 -89098801 - LTR8A LTR ERV1 -534 193 1 283 329 92 40 chr10 56490835 56490987 -89098301 + MIR3 SINE MIR 47 206 -2 1505 250 18 74 chr10 56491585 56492330 -89096958 - L1M4 LINE L1 -3417 2965 2261 1144 217 50 4 chr10 56492341 56492622 -89096666 - L1MA3 LINE L1 -1 6304 6011 341 240 151 7 chr10 56593790 56593936 -88995352 + L1 LINE L1 4791 4957 -1189 6259 111 2 2 chr10 56593946 56594884 -88994404 + L1P LINE L1 1 938 -5208 22 56 0 0 chr10 56595080 56595116 -88994172 + AT_rich Low_complexity Low_complexity 1 36 0 4049 18 0 0 chr10 56596095 56596665 -88992623 - L1P1 LINE L1 -415 5740 5171 2264 104 3 3 chr10 56596775 56597083 -88992205 + AluSp SINE Alu 1 308 -5 380 250 54 68 chr10 56597991 56598139 -88991149 + MER5A DNA MER1_type 38 183 -6 916 261 55 8 chr10 56599045 56599283 -88990005 + MIR SINE MIR 2 250 -12 294 205 0 0 chr10 56599285 56599368 -88989920 + (TA)n Simple_repeat Simple_repeat 2 84 0 363 259 52 91 chr10 56599588 56599820 -88989468 - MIR SINE MIR -31 231 9 619 195 59 0 chr10 56600775 56600893 -88988395 + FLAM_A SINE Alu 1 125 -8 672 48 0 0 chr10 56600902 56600986 -88988302 + (GGAA)n Simple_repeat Simple_repeat 1 84 0 703 242 83 52 chr10 56601546 56602042 -88987246 + L1M4 LINE L1 2957 3467 -2679 1337 205 27 43 chr10 56602673 56603043 -88986245 + L1MC4a LINE L1 7420 7783 -25 6378 127 19 8 chr10 56603047 56604111 -88985177 - Tigger1 DNA MER2_type -1 2417 1343 391 284 226 0 chr10 56605312 56605467 -88983821 + MIR SINE MIR 2 191 -71 414 165 13 13 chr10 56605573 56605652 -88983636 - AluJ/FRAM SINE Alu -16 296 218 258 292 50 67 chr10 56605659 56605779 -88983509 + MIR SINE MIR 13 130 -132 297 0 0 0 chr10 56606646 56606679 -88982609 + (T)n Simple_repeat Simple_repeat 1 33 0 250 238 12 12 chr10 56606766 56606846 -88982442 - MER67C LTR ERV1 -4 510 431 637 247 36 98 chr10 56607000 56607275 -88982013 - MER67C LTR ERV1 -215 312 42 2425 85 3 0 chr10 56607540 56607846 -88981442 - AluSp SINE Alu -3 310 4 21 0 0 0 chr10 56608067 56608088 -88981200 + AT_rich Low_complexity Low_complexity 1 21 0 2177 116 0 13 chr10 56608088 56608398 -88980890 - AluSg SINE Alu -4 306 1 2258 125 10 0 chr10 56608723 56609027 -88980261 + AluSq SINE Alu 2 308 -5 248 259 34 61 chr10 56609122 56609269 -88980019 + MLT1H LTR MaLR 96 238 -311 286 317 0 12 chr10 56609636 56609718 -88979570 - MIR3 SINE MIR -14 194 114 214 333 125 10 chr10 56610395 56610491 -88978797 + MIR SINE MIR 39 145 -63 309 89 0 0 chr10 56611112 56611157 -88978131 + (CA)n Simple_repeat Simple_repeat 1 45 0 222 149 21 0 chr10 56611991 56612038 -88977250 + T-rich Low_complexity Low_complexity 2 49 0 2527 189 42 37 chr10 56613290 56613908 -88975380 + L1MC3 LINE L1 7144 7764 -21 2486 249 31 4 chr10 56614033 56614748 -88974540 + L1M4 LINE L1 4538 5271 -875 4317 149 72 1 chr10 56614748 56615497 -88973791 - Tigger2 DNA MER2_type -1 2717 1916 1721 164 32 77 chr10 56615795 56616264 -88973024 - MER83 LTR ERV1 0 448 1 2437 73 0 0 chr10 56616573 56616875 -88972413 - AluY SINE Alu -9 302 1 359 239 46 0 chr10 56616908 56617017 -88972271 + L1MA9 LINE L1 6161 6274 -38 45 55 0 0 chr10 56617083 56617156 -88972132 + AT_rich Low_complexity Low_complexity 1 73 0 21 57 0 0 chr10 56617842 56617877 -88971411 + AT_rich Low_complexity Low_complexity 1 35 0 197 300 91 36 chr10 56617877 56617987 -88971301 - L2 LINE L2 -8 3264 3149 2039 169 91 32 chr10 56618039 56618502 -88970786 - LTR2B LTR ERV1 0 490 1 238 313 104 75 chr10 56618540 56618741 -88970547 - L2 LINE L2 -190 3082 2876 1206 213 114 22 chr10 56619443 56619856 -88969432 - Charlie1 DNA MER1_type -44 2717 2267 978 158 0 38 chr10 56619856 56620042 -88969246 - AluJb SINE Alu 0 312 133 190 353 16 8 chr10 56622263 56622385 -88966903 + L2 LINE L2 2942 3064 -208 376 285 72 0 chr10 56622742 56622863 -88966425 - MIR3 SINE MIR -21 187 58 287 278 61 26 chr10 56624026 56624141 -88965147 + MIR3 SINE MIR 73 191 -17 315 0 0 0 chr10 56626119 56626154 -88963134 + (CA)n Simple_repeat Simple_repeat 2 36 0 289 341 199 27 chr10 56626215 56626546 -88962742 - L2 LINE L2 0 3313 2926 1900 172 0 0 chr10 56626851 56627153 -88962135 - AluSx SINE Alu -10 302 1 22 35 0 0 chr10 56627221 56627250 -88962038 + AT_rich Low_complexity Low_complexity 1 29 0 2561 223 22 0 chr10 56627485 56628021 -88961267 + L1MA4A LINE L1 1 567 -6642 5369 177 35 9 chr10 56628025 56629585 -88959703 + L1MA4A LINE L1 5759 7360 -5 820 298 52 21 chr10 56630008 56630448 -88958840 + MLT1F1 LTR MaLR 1 534 -33 624 318 30 10 chr10 56631329 56631527 -88957761 + LTR16A LTR ERVL 241 442 -8 278 271 16 74 chr10 56632237 56632359 -88956929 + L3b LINE CR1 1246 1360 -223 22 35 0 0 chr10 56633005 56633034 -88956254 + AT_rich Low_complexity Low_complexity 1 29 0 762 330 49 25 chr10 56633044 56633490 -88955798 + L1M2c LINE L1 999 1455 -5684 254 284 54 0 chr10 56633592 56633666 -88955622 + L1M2c LINE L1 1821 1898 -5241 * 989 282 55 14 chr10 56633640 56634047 -88955241 + L1M2c LINE L1 1764 2172 -4957 195 42 0 0 chr10 56634548 56634572 -88954716 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 28 0 0 0 chr10 56634577 56634605 -88954683 + AT_rich Low_complexity Low_complexity 1 28 0 265 303 101 91 chr10 56635203 56635589 -88953699 + L2 LINE L2 2862 3251 -62 181 407 82 15 chr10 56635693 56635828 -88953460 + L2 LINE L2 3124 3267 -5 1223 204 128 7 chr10 56636177 56636481 -88952807 + L1MC2 LINE L1 5269 5609 -735 387 141 0 0 chr10 56636520 56636584 -88952704 + (TA)n Simple_repeat Simple_repeat 2 65 0 3308 181 12 41 chr10 56636584 56637340 -88951948 + L1MC2 LINE L1 5603 6336 -8 207 0 0 0 chr10 56637541 56637564 -88951724 + (A)n Simple_repeat Simple_repeat 1 23 0 360 274 70 100 chr10 56637736 56637977 -88951311 - L2 LINE L2 0 3313 3080 752 359 138 31 chr10 56638259 56638910 -88950378 - L2 LINE L2 -664 2650 2070 1583 219 144 29 chr10 56638910 56639362 -88949926 - MLT1D LTR MaLR -1 504 1 752 359 138 31 chr10 56639362 56640567 -88948721 - L2 LINE L2 -1244 2070 566 2294 172 45 5 chr10 56640567 56641010 -88948278 - LOR1b LTR ERV1 0 461 1 752 359 138 31 chr10 56641010 56641140 -88948148 - L2 LINE L2 -2748 566 451 1129 264 134 72 chr10 56641308 56641820 -88947468 - MLT1G1 LTR MaLR -4 590 1 1379 192 3 72 chr10 56641853 56642171 -88947117 + AluJo SINE Alu 1 296 -16 1829 187 65 17 chr10 56644540 56644958 -88944330 + LTR56 LTR ERV1 8 445 0 198 0 0 0 chr10 56645805 56645827 -88943461 + (TC)n Simple_repeat Simple_repeat 1 22 0 2397 85 0 0 chr10 56645846 56646151 -88943137 - AluY SINE Alu 0 311 7 3143 254 63 21 chr10 56647297 56648756 -88940532 - L1MDa LINE L1 -2652 3888 2362 2130 168 49 9 chr10 56648832 56649265 -88940023 + MER61C LTR ERV1 1 434 0 21 0 0 0 chr10 56649757 56649778 -88939510 + AT_rich Low_complexity Low_complexity 1 21 0 257 27 0 27 chr10 56649786 56649823 -88939465 + AluY SINE Alu 257 292 -9 1389 187 53 14 chr10 56650872 56651155 -88938133 - AluJb SINE Alu -18 294 1 28 91 0 0 chr10 56652630 56652707 -88936581 + AT_rich Low_complexity Low_complexity 1 77 0 21 57 0 0 chr10 56652860 56652895 -88936393 + AT_rich Low_complexity Low_complexity 1 35 0 1159 174 5 15 chr10 56654167 56654363 -88934925 + AluJb SINE Alu 84 277 -35 22 35 0 0 chr10 56654425 56654454 -88934834 + AT_rich Low_complexity Low_complexity 1 29 0 6515 166 11 33 chr10 56655048 56655993 -88933295 - Tigger2 DNA MER2_type -655 2063 1151 2158 120 0 0 chr10 56655993 56656293 -88932995 - AluSg1 SINE Alu -9 300 1 6515 166 11 33 chr10 56656293 56656590 -88932698 - Tigger2 DNA MER2_type -1567 1151 849 685 134 65 168 chr10 56656590 56656822 -88932466 + AluJo SINE Alu 85 292 -20 4962 153 14 11 chr10 56656822 56657676 -88931612 - Tigger2 DNA MER2_type -1861 857 1 332 107 60 0 chr10 56658816 56658900 -88930388 + (TAGA)n Simple_repeat Simple_repeat 3 91 0 25 31 0 0 chr10 56659533 56659565 -88929723 + AT_rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr10 56659633 56659656 -88929632 + AT_rich Low_complexity Low_complexity 1 23 0 276 360 11 0 chr10 56660057 56660146 -88929142 - MIR SINE MIR -170 92 3 2010 155 0 10 chr10 56660451 56660761 -88928527 + AluSx SINE Alu 1 307 -5 1005 241 14 0 chr10 56661040 56661256 -88928032 - MER20 DNA MER1_type 0 219 1 27 87 0 0 chr10 56661379 56661448 -88927840 + AT_rich Low_complexity Low_complexity 1 69 0 2237 89 17 0 chr10 56662660 56662953 -88926335 + AluY SINE Alu 1 298 -13 180 0 0 0 chr10 56662965 56662985 -88926303 + (CA)n Simple_repeat Simple_repeat 2 21 0 2010 116 10 22 chr10 56663893 56664204 -88925084 - AluSx SINE Alu 0 312 6 216 354 83 7 chr10 56664794 56664938 -88924350 + MIR SINE MIR 59 213 -49 9614 25 3 1 chr10 56667076 56668989 -88920299 - L1PA3 LINE L1 -3 6152 4237 203 189 0 0 chr10 56669557 56669594 -88919694 + (TTA)n Simple_repeat Simple_repeat 1 37 0 1348 189 52 58 chr10 56669609 56669720 -88919568 + MLT1B LTR MaLR 3 113 -277 2183 119 7 7 chr10 56669720 56670030 -88919258 + AluSx SINE Alu 3 312 0 1348 189 52 58 chr10 56670030 56670209 -88919079 + MLT1B LTR MaLR 113 291 -99 1479 190 42 3 chr10 56670257 56670546 -88918742 - AluJo SINE Alu -12 300 1 2167 117 0 0 chr10 56670671 56670970 -88918318 - AluSg SINE Alu -9 301 3 250 276 188 35 chr10 56671962 56672132 -88917156 - MIR SINE MIR -12 250 55 5325 72 16 10 chr10 56672653 56673360 -88915928 + LTR17 LTR ERV1 1 711 -69 1820 73 0 0 chr10 56673345 56673591 -88915697 - pTR5 LTR ERV1 -2046 392 147 * 1104 104 120 11 chr10 56673579 56673762 -88915526 + LTR17 LTR ERV1 577 779 -1 * 207 0 0 0 chr10 56674856 56674879 -88914409 + (CA)n Simple_repeat Simple_repeat 2 24 0 770 178 0 0 chr10 56674925 56675054 -88914234 + FLAM_C SINE Alu 1 129 -4 21 0 0 0 chr10 56675250 56675271 -88914017 + AT_rich Low_complexity Low_complexity 1 21 0 22 88 0 0 chr10 56675456 56675513 -88913775 + AT_rich Low_complexity Low_complexity 1 57 0 608 258 24 12 chr10 56675938 56676105 -88913183 + MER87 LTR ERV1 373 541 0 300 203 78 0 chr10 56676663 56676727 -88912561 - L2 LINE L2 -55 3258 3190 3790 166 55 3 chr10 56677829 56678504 -88910784 - MER50 LTR ERV1 -24 710 1 36 77 0 0 chr10 56678537 56678615 -88910673 + AT_rich Low_complexity Low_complexity 1 78 0 24 32 0 0 chr10 56678738 56678769 -88910519 + AT_rich Low_complexity Low_complexity 1 31 0 2026 98 0 4 chr10 56679182 56679456 -88909832 - AluSq SINE Alu -3 310 38 7414 186 22 26 chr10 56679514 56681915 -88907373 + L1PA16 LINE L1 1 2047 -4802 5264 188 36 13 chr10 56681911 56682171 -88907117 + L1PA16 LINE L1 4748 5000 -1869 * 2448 148 19 12 chr10 56682171 56682596 -88906692 - MSTA LTR MaLR 0 428 1 5264 188 36 13 chr10 56682596 56684410 -88904878 + L1PA16 LINE L1 5000 6869 0 318 242 144 23 chr10 56684441 56684573 -88904715 - L1MC5 LINE L1 -298 7663 7516 215 275 0 0 chr10 56685062 56685142 -88904146 + A-rich Low_complexity Low_complexity 3 82 0 227 236 28 69 chr10 56685300 56685372 -88903916 + L1ME LINE L1 5604 5672 -449 21 0 0 0 chr10 56685462 56685483 -88903805 + AT_rich Low_complexity Low_complexity 1 21 0 34 55 0 0 chr10 56686455 56686510 -88902778 + AT_rich Low_complexity Low_complexity 1 55 0 1521 203 3 10 chr10 56686510 56686800 -88902488 - AluJo SINE Alu -21 291 4 22 0 0 0 chr10 56690552 56690574 -88898714 + AT_rich Low_complexity Low_complexity 1 22 0 411 358 19 0 chr10 56691385 56691547 -88897741 - MIR SINE MIR -93 169 5 228 268 0 14 chr10 56692541 56692612 -88896676 - L1MC4 LINE L1 -30 8012 7943 746 68 29 51 chr10 56692666 56692903 -88896385 + (TCTA)n Simple_repeat Simple_repeat 1 231 0 3735 247 122 38 chr10 56692952 56693112 -88896176 - L1MC4 LINE L1 -141 7901 7756 866 246 28 0 chr10 56693112 56693327 -88895961 - MER58A DNA MER1_type -1 223 3 3735 247 122 38 chr10 56693327 56695091 -88894197 - L1MC4 LINE L1 -286 7756 5784 1524 193 30 33 chr10 56695091 56695391 -88893897 - AluJo SINE Alu -6 306 8 3735 247 122 38 chr10 56695391 56695559 -88893729 - L1MC4 LINE L1 -2258 5784 5631 751 155 16 82 chr10 56696747 56696941 -88892347 - L1MA10 LINE L1 -3 6331 6151 2959 205 46 28 chr10 56696946 56697266 -88892022 - L1MB1 LINE L1 0 6291 5978 1973 144 6 6 chr10 56697266 56697578 -88891710 + AluSx SINE Alu 1 312 0 2959 205 46 28 chr10 56697578 56698038 -88891250 - L1MB1 LINE L1 -313 5978 5453 237 250 0 0 chr10 56698038 56698094 -88891194 - MLT2A1 LTR ERVL 0 444 389 1554 237 21 0 chr10 56698098 56698423 -88890865 - MLT1A1 LTR MaLR -1 364 33 1649 201 44 20 chr10 56698423 56698870 -88890418 + L1M3 LINE L1 4986 5438 -730 82 21 0 0 chr10 56698935 56699031 -88890257 + AT_rich Low_complexity Low_complexity 1 96 0 504 320 81 14 chr10 56699120 56699342 -88889946 - MIR SINE MIR -10 252 16 686 357 106 31 chr10 56699645 56700277 -88889011 + L2 LINE L2 2247 2982 -331 2324 34 0 20 chr10 56700277 56700571 -88888717 - AluY SINE Alu -9 302 15 686 357 106 31 chr10 56700571 56700837 -88888451 + L2 LINE L2 2982 3227 -86 261 362 31 15 chr10 56700873 56701069 -88888219 - MIR SINE MIR -51 211 13 769 177 63 0 chr10 56702172 56702330 -88886958 + MER2 DNA MER2_type 43 210 -135 2050 128 0 3 chr10 56702970 56703258 -88886030 + AluSx SINE Alu 7 293 -19 288 249 230 24 chr10 56704152 56704317 -88884971 - MIR SINE MIR -57 205 7 392 282 0 0 chr10 56705959 56706062 -88883226 + MIR SINE MIR 102 204 -58 21 0 0 0 chr10 56706135 56706156 -88883132 + AT_rich Low_complexity Low_complexity 1 21 0 199 368 15 0 chr10 56706524 56706592 -88882696 + MIR SINE MIR 38 106 -102 412 333 6 33 chr10 56706857 56707040 -88882248 - Charlie8 DNA MER1_type -2149 268 91 226 265 15 44 chr10 56707123 56707191 -88882097 - L3 LINE CR1 -41 1536 1471 189 349 155 38 chr10 56707265 56707529 -88881759 - L3 LINE CR1 -141 1436 1142 1850 135 6 83 chr10 56707599 56707961 -88881327 - MER1B DNA MER1_type 0 337 4 24 0 0 0 chr10 56708256 56708280 -88881008 + AT_rich Low_complexity Low_complexity 1 24 0 7679 19 3 0 chr10 56708350 56709473 -88879815 - L1PA3 LINE L1 0 6155 5034 3910 22 0 0 chr10 56709473 56709929 -88879359 + L1P LINE L1 3745 4200 -1946 226 256 0 160 chr10 56711791 56711880 -88877408 + MIR SINE MIR 84 149 -113 1589 247 111 50 chr10 56711880 56712121 -88877167 - MLT1E1 LTR MaLR -2 652 427 2346 70 0 13 chr10 56712121 56712434 -88876854 - AluY SINE Alu -2 309 1 1589 247 111 50 chr10 56712434 56712807 -88876481 - MLT1E1 LTR MaLR -227 427 1 226 256 0 160 chr10 56712807 56712842 -88876446 + MIR SINE MIR 149 188 -74 601 117 12 37 chr10 56715272 56715434 -88873854 + (TA)n Simple_repeat Simple_repeat 1 158 0 1280 136 5 0 chr10 56715434 56715625 -88873663 + AluSq SINE Alu 117 308 -5 198 0 0 0 chr10 56715702 56715724 -88873564 + (TA)n Simple_repeat Simple_repeat 1 22 0 440 243 148 71 chr10 56716120 56716330 -88872958 - MIR SINE MIR 0 262 37 19070 44 10 0 chr10 56717130 56720267 -88869021 - L1PA5 LINE L1 -6 6148 2972 1694 65 4 0 chr10 56720396 56720625 -88868663 - L1PA7 LINE L1 -1 6153 5924 657 231 0 14 chr10 56720878 56721021 -88868267 + MER45A DNA AcHobo 37 177 -1 208 331 21 35 chr10 56721152 56721297 -88867991 - L2 LINE L2 -213 3059 2917 2026 149 0 0 chr10 56722713 56723009 -88866279 + AluSx SINE Alu 1 296 -16 1196 273 84 37 chr10 56723129 56723260 -88866028 + L1ME3A LINE L1 4896 5019 -1151 1851 154 13 3 chr10 56723260 56723559 -88865729 + AluSp SINE Alu 1 302 -11 1196 273 84 37 chr10 56723559 56724314 -88864974 + L1ME3A LINE L1 5019 5830 -340 2073 137 3 13 chr10 56724382 56724715 -88864573 - AluSq SINE Alu 0 313 1 892 224 68 0 chr10 56724860 56725052 -88864236 + MER58A DNA MER1_type 20 224 0 317 341 81 36 chr10 56725458 56725681 -88863607 - L3 LINE CR1 -2 1575 1343 751 335 83 50 chr10 56726111 56726595 -88862693 - L2 LINE L2 0 3313 2814 1121 188 80 122 chr10 56726786 56727271 -88862017 + MER4C LTR ERV1 1 465 0 255 344 11 22 chr10 56727279 56727369 -88861919 - L2 LINE L2 -662 2652 2564 1569 195 162 5 chr10 56728347 56728717 -88860571 + MLT2B2 LTR ERVL 53 480 -35 263 146 18 18 chr10 56728734 56728789 -88860499 + MLT2B2 LTR ERVL 459 513 -2 278 333 0 0 chr10 56728843 56728924 -88860364 + MIR SINE MIR 100 180 -82 698 319 178 15 chr10 56729312 56729872 -88859416 - L2 LINE L2 0 3313 2667 419 313 30 0 chr10 56729930 56730064 -88859224 - MIR SINE MIR -1 261 124 1538 227 42 62 chr10 56731711 56732182 -88857106 - MLT1C LTR MaLR 0 467 6 311 0 26 0 chr10 56732420 56732459 -88856829 + (TA)n Simple_repeat Simple_repeat 1 40 0 427 327 111 22 chr10 56732933 56733248 -88856040 + LTR16C LTR ERVL 149 491 0 281 294 224 0 chr10 56733665 56733750 -88855538 - L2 LINE L2 -8 3264 3161 2150 107 7 0 chr10 56733947 56734245 -88855043 + AluSx SINE Alu 1 300 -12 28 29 0 0 chr10 56734708 56734743 -88854545 + AT_rich Low_complexity Low_complexity 1 35 0 743 249 24 0 chr10 56736453 56736622 -88852666 + MER5B DNA MER1_type 5 177 -1 1321 173 68 149 chr10 56737039 56737581 -88851707 + MER67D LTR ERV1 13 510 -4 322 292 58 36 chr10 56737596 56737733 -88851555 + MIR SINE MIR 58 197 -65 2337 97 0 0 chr10 56738263 56738571 -88850717 - AluY SINE Alu -1 310 3 180 179 0 0 chr10 56739458 56739497 -88849791 + (CA)n Simple_repeat Simple_repeat 1 39 0 2927 181 48 63 chr10 56739820 56740617 -88848671 - LTR1 LTR ERV1 0 785 1 1241 322 105 18 chr10 56741443 56742107 -88847181 + L2 LINE L2 1376 2097 -1217 511 269 50 15 chr10 56742164 56742365 -88846923 + L1MEc LINE L1 1087 1294 -5451 513 130 13 0 chr10 56742374 56742451 -88846837 + AluJ/FLAM SINE Alu 1 78 -234 14501 57 1 0 chr10 56742451 56745116 -88844172 + L1PA5 LINE L1 3482 6153 -1 1522 164 27 10 chr10 56745116 56745408 -88843880 - MER4D LTR ERV1 -606 297 1 1114 242 50 50 chr10 56745408 56745825 -88843463 - LTR38 LTR ERV1 -3 553 137 827 294 4 0 chr10 56745899 56746171 -88843117 + L1MEc LINE L1 2863 3135 -3429 1430 189 4 4 chr10 56746216 56746481 -88842807 - AluJb SINE Alu -20 292 28 1087 295 106 10 chr10 56746505 56747224 -88842064 + L1MEc LINE L1 3191 3978 -2586 586 258 18 9 chr10 56747224 56747397 -88841891 + MER4E LTR ERV1 1 283 -589 1765 204 11 6 chr10 56747399 56747751 -88841537 + MER4D LTR ERV1 550 903 0 621 275 163 70 chr10 56747803 56748301 -88840987 + L1MEc LINE L1 4 547 -5498 400 102 0 0 chr10 56748301 56748360 -88840928 + MER39B LTR ERV1 1 59 -594 499 202 71 0 chr10 56748361 56748460 -88840828 + L1MEc LINE L1 4524 4629 -1935 841 223 22 11 chr10 56748545 56748729 -88840559 - MLT1A2 LTR MaLR -5 369 184 310 126 45 17 chr10 56748765 56748837 -88840451 - MSTC LTR MaLR -324 72 1 1369 193 28 55 chr10 56748837 56749200 -88840088 + L1MC3 LINE L1 7295 7647 -138 24 67 0 0 chr10 56749264 56749309 -88839979 + AT_rich Low_complexity Low_complexity 1 45 0 784 227 28 127 chr10 56749309 56749439 -88839849 + L1ME1 LINE L1 3883 4024 -2122 2143 129 0 3 chr10 56749439 56749749 -88839539 + AluSq SINE Alu 1 309 -4 784 227 28 127 chr10 56749749 56750195 -88839093 + L1ME1 LINE L1 4024 4379 -1767 2343 240 92 14 chr10 56750204 56750866 -88838422 + L1ME1 LINE L1 5336 6049 -117 23 0 0 0 chr10 56750941 56750964 -88838324 + AT_rich Low_complexity Low_complexity 1 23 0 6993 151 62 2 chr10 56751623 56752857 -88836431 - Tigger1 DNA MER2_type -1 2417 1111 2668 159 25 6 chr10 56752861 56753334 -88835954 - Tigger1 DNA MER2_type -1935 483 2 2218 107 0 0 chr10 56753828 56754126 -88835162 + AluSx SINE Alu 1 298 -14 1507 187 78 26 chr10 56755299 56755646 -88833642 - MER47A DNA MER2_type 0 366 2 591 249 24 24 chr10 56756463 56756632 -88832656 + MIR SINE MIR 69 237 -25 2370 175 19 14 chr10 56756804 56757227 -88832061 - MSTA LTR MaLR -1 427 3 6680 189 40 5 chr10 56757229 56758462 -88830826 - MSTA-int LTR MaLR 0 1651 376 322 148 0 19 chr10 56758581 56758635 -88830653 - MSTB1 LTR MaLR -377 55 3 2388 166 19 7 chr10 56759966 56760387 -88828901 + MSTB LTR MaLR 1 426 0 7480 22 0 24 chr10 56760937 56762112 -88827176 - L1PA4 LINE L1 0 6155 4994 1258 211 9 77 chr10 56762146 56762261 -88827027 + MLT1B LTR MaLR 65 186 -204 1845 171 7 3 chr10 56762261 56762560 -88826728 + AluJb SINE Alu 1 300 -12 1258 211 9 77 chr10 56762560 56762794 -88826494 + MLT1B LTR MaLR 186 390 0 23 33 0 0 chr10 56763573 56763603 -88825685 + AT_rich Low_complexity Low_complexity 1 30 0 2356 81 0 0 chr10 56764180 56764489 -88824799 + AluY SINE Alu 1 309 -2 218 283 59 86 chr10 56764599 56764751 -88824537 - L2 LINE L2 -8 3305 3158 207 0 0 0 chr10 56764772 56764795 -88824493 + (TA)n Simple_repeat Simple_repeat 2 24 0 326 283 115 9 chr10 56764811 56764924 -88824364 + L2 LINE L2 3187 3311 -2 2067 138 123 5 chr10 56765193 56765576 -88823712 - MSTA LTR MaLR 0 428 1 1779 181 51 0 chr10 56765578 56765909 -88823379 - MER7A DNA MER2_type 0 346 1 344 331 35 30 chr10 56767344 56767513 -88821775 - MIR SINE MIR -73 189 20 239 226 94 47 chr10 56768441 56768547 -88820741 + L1ME3A LINE L1 5962 6072 -98 259 285 99 42 chr10 56768604 56768916 -88820372 + L1MEc LINE L1 1266 1595 -4801 1325 262 48 61 chr10 56768916 56769473 -88819815 + MER68 LTR ERV1 2 551 -11 671 283 94 34 chr10 56769679 56769944 -88819344 + MER57A LTR ERV1 123 403 0 665 284 75 62 chr10 56770189 56770855 -88818433 + L1MEc LINE L1 2418 3073 -3142 1939 159 0 0 chr10 56770855 56771156 -88818132 - AluSx SINE Alu -9 303 3 665 284 75 62 chr10 56771156 56771374 -88817914 + L1MEc LINE L1 3073 3321 -2894 2599 124 36 12 chr10 56771374 56771792 -88817496 - MSTA LTR MaLR 0 428 1 665 284 75 62 chr10 56771792 56771941 -88817347 + L1MEc LINE L1 3321 3466 -2749 272 306 24 32 chr10 56771992 56772116 -88817172 + MLT1B-int LTR MaLR 1 123 -1248 2240 94 3 0 chr10 56772774 56773071 -88816217 - AluY SINE Alu -13 298 1 504 271 61 102 chr10 56773338 56773699 -88815589 + MLT1B-int LTR MaLR 1025 1370 -1 1044 274 88 35 chr10 56773753 56774092 -88815196 + MLT1G LTR MaLR 51 407 -183 1349 171 19 11 chr10 56774249 56774513 -88814775 + L1PA15 LINE L1 5887 6152 -13 1602 119 0 4 chr10 56774625 56774852 -88814436 + AluSg SINE Alu 44 269 -41 207 0 0 0 chr10 56774870 56774893 -88814395 + (CA)n Simple_repeat Simple_repeat 2 24 0 191 369 22 45 chr10 56775197 56775376 -88813912 + MIR3 SINE MIR 5 179 -29 2196 75 3 7 chr10 56777538 56777833 -88811455 + AluY SINE Alu 1 294 -17 326 369 25 12 chr10 56777873 56778033 -88811255 - MIR SINE MIR -65 197 36 21 36 0 0 chr10 56781206 56781234 -88808054 + AT_rich Low_complexity Low_complexity 1 28 0 236 302 62 42 chr10 56781321 56781417 -88807871 - L2 LINE L2 -12 3301 3204 24 32 0 0 chr10 56781804 56781835 -88807453 + AT_rich Low_complexity Low_complexity 1 31 0 362 82 109 18 chr10 56781871 56781981 -88807307 + (TTATG)n Simple_repeat Simple_repeat 2 121 0 1309 78 0 62 chr10 56782152 56782394 -88806894 + L1PA2 LINE L1 5925 6151 -4 839 215 0 0 chr10 56782420 56782583 -88806705 + FRAM SINE Alu 4 166 0 188 33 0 33 chr10 56782809 56782839 -88806449 + (GGGTG)n Simple_repeat Simple_repeat 5 33 0 760 156 0 38 chr10 56785961 56786147 -88803141 + CT-rich Low_complexity Low_complexity 2 180 0 1215 281 40 28 chr10 56786203 56786754 -88802534 + HERVL40 LTR ERVL 2802 3392 -2138 255 318 103 0 chr10 56786764 56786871 -88802417 + HERVL40 LTR ERVL 3531 3648 -1882 * 900 300 19 16 chr10 56786855 56787112 -88802176 + HERVL40 LTR ERVL 3918 4175 -1355 691 297 0 0 chr10 56787216 56787371 -88801917 + HERVL40 LTR ERVL 4438 4592 -938 1522 251 45 37 chr10 56787558 56788067 -88801221 + HERVL40 LTR ERVL 4967 5479 -51 297 234 26 0 chr10 56788151 56788228 -88801060 - LTR40c LTR ERVL -327 138 60 * 675 283 18 110 chr10 56788205 56788597 -88800691 + LTR41 LTR ERVL 334 689 -84 242 250 36 86 chr10 56789708 56789826 -88799462 - L1ME LINE L1 -624 5542 5430 2203 75 3 26 chr10 56789826 56790134 -88799154 - AluY SINE Alu -10 301 1 242 250 36 86 chr10 56790134 56790155 -88799133 - L1ME LINE L1 -735 5431 5410 2127 207 32 44 chr10 56790308 56791252 -88798036 + L1MA10 LINE L1 4847 5795 -373 602 291 105 29 chr10 56791252 56791612 -88797676 + MER57A LTR ERV1 9 400 -2 2159 236 15 9 chr10 56791615 56792162 -88797126 + L1MA10 LINE L1 5785 6334 0 463 301 81 23 chr10 56792370 56792766 -88796522 + L1 LINE L1 4015 4433 -1713 562 129 0 0 chr10 56793100 56793185 -88796103 - MSTD LTR MaLR 0 396 312 641 208 56 0 chr10 56793294 56793438 -88795850 - L1 LINE L1 -1251 4895 4744 784 227 0 107 chr10 56793438 56793663 -88795625 - Tigger7 DNA MER2_type -504 201 1 216 228 35 35 chr10 56795282 56795339 -88793949 - L2 LINE L2 -8 3305 3249 1039 79 0 0 chr10 56795406 56795545 -88793743 - AluY SINE Alu -6 305 167 209 238 0 0 chr10 56796319 56796361 -88792927 + T-rich Low_complexity Low_complexity 1 42 0 21 71 0 0 chr10 56796848 56796890 -88792398 + AT_rich Low_complexity Low_complexity 1 42 0 2213 97 97 3 chr10 56796996 56797326 -88791962 + THE1B LTR MaLR 3 363 -1 29 47 0 0 chr10 56797880 56797923 -88791365 + AT_rich Low_complexity Low_complexity 1 43 0 226 200 38 38 chr10 56798010 56798115 -88791173 + (TTTAA)n Simple_repeat Simple_repeat 3 107 0 492 143 0 45 chr10 56799047 56799180 -88790108 + (TA)n Simple_repeat Simple_repeat 1 127 0 194 152 0 0 chr10 56799209 56799242 -88790046 + L2 LINE L2 3036 3068 -245 340 380 27 11 chr10 56799407 56799594 -88789694 - MIR SINE MIR -71 191 2 29 60 0 0 chr10 56800239 56800289 -88788999 + AT_rich Low_complexity Low_complexity 1 50 0 2395 269 142 6 chr10 56800414 56801146 -88788142 + L1ME1 LINE L1 8 839 -5703 2168 318 79 12 chr10 56801135 56801556 -88787732 + L1ME1 LINE L1 5613 6004 -660 * 1799 161 3 26 chr10 56801556 56801867 -88787421 - AluSx SINE Alu -8 304 1 2168 318 79 12 chr10 56801867 56802427 -88786861 + L1ME1 LINE L1 6004 6662 -2 24 32 0 0 chr10 56802547 56802578 -88786710 + AT_rich Low_complexity Low_complexity 1 31 0 23 0 0 0 chr10 56802825 56802848 -88786440 + AT_rich Low_complexity Low_complexity 1 23 0 209 236 153 14 chr10 56803420 56803492 -88785796 - L2 LINE L2 -40 3273 3192 1258 154 111 55 chr10 56803712 56804079 -88785209 - MSTA LTR MaLR 0 428 1 250 296 120 9 chr10 56804086 56804194 -88785094 + MLT1I LTR MaLR 94 213 -196 2409 158 26 19 chr10 56804438 56804863 -88784425 + MSTA LTR MaLR 1 428 0 1839 185 11 3 chr10 56804863 56805281 -88784007 + MSTA-int LTR MaLR 1 419 -1161 215 133 22 0 chr10 56805590 56805635 -88783653 + (TA)n Simple_repeat Simple_repeat 1 46 0 31 44 0 0 chr10 56807782 56807827 -88781461 + AT_rich Low_complexity Low_complexity 1 45 0 504 228 0 0 chr10 56810170 56810315 -88778973 + CT-rich Low_complexity Low_complexity 3 147 0 274 270 0 0 chr10 56810357 56810431 -88778857 + CT-rich Low_complexity Low_complexity 1 74 0 1072 110 13 0 chr10 56814995 56815150 -88774138 + AluSg/x SINE Alu 156 312 0 37 69 0 0 chr10 56816903 56816975 -88772313 + AT_rich Low_complexity Low_complexity 1 72 0 239 303 77 17 chr10 56817177 56817316 -88771972 + MIR SINE MIR 20 161 -65 22 35 0 0 chr10 56817409 56817438 -88771850 + AT_rich Low_complexity Low_complexity 1 29 0 2352 88 0 0 chr10 56817680 56817976 -88771312 - AluSc SINE Alu -11 298 3 285 198 47 47 chr10 56818691 56818777 -88770511 - L1ME3A LINE L1 -8 6162 6077 493 282 78 20 chr10 56818837 56819243 -88770045 - L1ME3A LINE L1 -223 5947 5457 456 275 103 26 chr10 56819450 56819683 -88769605 - Charlie8 DNA MER1_type -2130 287 37 24 0 0 0 chr10 56819795 56819819 -88769469 + AT_rich Low_complexity Low_complexity 1 24 0 2189 89 0 19 chr10 56820149 56820463 -88768825 + AluY SINE Alu 1 308 -3 27 62 0 0 chr10 56821144 56821192 -88768096 + AT_rich Low_complexity Low_complexity 1 48 0 218 191 0 44 chr10 56823645 56823713 -88765575 + GA-rich Low_complexity Low_complexity 2 66 0 218 157 0 20 chr10 56824309 56824360 -88764928 + (TA)n Simple_repeat Simple_repeat 2 51 0 23 0 0 0 chr10 56825094 56825117 -88764171 + AT_rich Low_complexity Low_complexity 1 23 0 28 61 0 0 chr10 56826087 56826136 -88763152 + AT_rich Low_complexity Low_complexity 1 49 0 22 0 0 0 chr10 56826604 56826626 -88762662 + AT_rich Low_complexity Low_complexity 1 22 0 184 30 61 0 chr10 56827711 56827744 -88761544 + A-rich Low_complexity Low_complexity 2 36 0 24 32 0 0 chr10 56829372 56829403 -88759885 + AT_rich Low_complexity Low_complexity 1 31 0 222 281 11 56 chr10 56830689 56830778 -88758510 + L2 LINE L2 3188 3272 0 399 236 69 56 chr10 56833384 56833579 -88755709 + MER63 DNA MER1_type 5 1674 -14 1399 220 48 3 chr10 56833669 56833964 -88755324 + AluJo SINE Alu 1 308 -4 24 32 0 0 chr10 56834796 56834827 -88754461 + AT_rich Low_complexity Low_complexity 1 31 0 596 269 224 0 chr10 56834887 56835088 -88754200 + MIR SINE MIR 6 251 -11 550 87 0 0 chr10 56835119 56835217 -88754071 + L1PA3 LINE L1 10 380 -6081 * 36957 37 27 2 chr10 56835184 56840616 -88748672 + L1PA3 LINE L1 893 6467 -3 1813 137 10 57 chr10 56940971 56941285 -88648003 - AluSx SINE Alu -13 299 1 2181 107 3 3 chr10 56942512 56942812 -88646476 - AluY SINE Alu -11 300 1 1402 263 153 24 chr10 56942864 56943914 -88645374 - L1ME3A LINE L1 -23 6147 4957 389 203 13 13 chr10 56944026 56944104 -88645184 + Tigger5 DNA MER2_type 1 78 -2245 312 114 0 0 chr10 56944104 56944148 -88645140 - Tigger5 DNA MER2_type -3 2320 2277 * 408 176 33 11 chr10 56944146 56944237 -88645051 - MER94 DNA DNA -35 99 7 252 329 53 29 chr10 56944674 56944844 -88644444 + L2 LINE L2 2681 2854 -460 874 167 98 54 chr10 56945523 56945727 -88643561 + AluJo SINE Alu 87 299 -13 24 0 0 0 chr10 56946160 56946184 -88643104 + AT_rich Low_complexity Low_complexity 1 24 0 384 346 24 0 chr10 56946888 56947015 -88642273 + LTR16B LTR ERVL 1 130 -334 6380 194 102 29 chr10 56947645 56949175 -88640113 - MER52A LTR ERV1 0 1755 1 25 31 0 0 chr10 56949579 56949611 -88639677 + AT_rich Low_complexity Low_complexity 1 32 0 2220 89 0 4 chr10 56949760 56950076 -88639212 - AluY SINE Alu 0 315 1 1393 84 0 11 chr10 56950497 56950687 -88638601 - AluSg SINE Alu -122 188 1 427 189 50 10 chr10 56951080 56951207 -88638081 + L1MA8 LINE L1 5994 6120 -48 23 0 0 0 chr10 56951802 56951825 -88637463 + AT_rich Low_complexity Low_complexity 1 23 0 3395 97 4 6 chr10 56951825 56952300 -88636988 + L1PB1 LINE L1 5659 6132 -19 468 143 10 41 chr10 56952303 56952401 -88636887 - L1PA13 LINE L1 -1 6162 6068 29 47 0 0 chr10 56952402 56952445 -88636843 + AT_rich Low_complexity Low_complexity 1 43 0 181 275 121 11 chr10 56952500 56952591 -88636697 - L2 LINE L2 -86 3227 3127 340 89 0 0 chr10 56952720 56952765 -88636523 - 5S rRNA rRNA -75 46 2 219 348 84 26 chr10 56953124 56953279 -88636009 - MIR3 SINE MIR -25 183 20 229 341 63 8 chr10 56953288 56953414 -88635874 + MIR SINE MIR 14 146 -116 272 391 19 19 chr10 56954269 56954425 -88634863 + MIR SINE MIR 13 168 -94 191 35 0 35 chr10 56954468 56954497 -88634791 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 227 130 43 0 chr10 56954752 56954798 -88634490 - L1M4 LINE L1 -867 5279 5232 3350 160 0 8 chr10 56954924 56955455 -88633833 + MER1A DNA MER1_type 1 527 0 50 42 0 0 chr10 56955758 56955829 -88633459 + AT_rich Low_complexity Low_complexity 1 71 0 2463 178 30 59 chr10 56955872 56956322 -88632966 - L1MB3 LINE L1 0 6183 5751 2684 42 0 0 chr10 56956322 56956630 -88632658 - AluY SINE Alu -3 308 1 2463 178 30 59 chr10 56956630 56956736 -88632552 - L1MB3 LINE L1 -432 5751 5643 518 309 87 36 chr10 56957042 56957294 -88631994 - MLT1L LTR MaLR -350 265 1 251 335 23 64 chr10 56958274 56958447 -88630841 + L2 LINE L2 2882 3047 -225 424 105 12 35 chr10 56958552 56958638 -88630650 + (TC)n Simple_repeat Simple_repeat 1 84 0 584 327 111 62 chr10 56958798 56959412 -88629876 + L2 LINE L2 137 780 -2534 324 340 105 0 chr10 56959412 56959565 -88629723 + L2 LINE L2 2024 2192 -1122 634 309 192 20 chr10 56959702 56960436 -88628852 + L2 LINE L2 2435 3307 -6 2072 123 0 10 chr10 56963694 56964002 -88625286 - AluSx SINE Alu -7 305 1 32 26 0 0 chr10 56964217 56964256 -88625032 + AT_rich Low_complexity Low_complexity 1 39 0 592 201 60 76 chr10 56966522 56966662 -88622626 + MER20 DNA MER1_type 37 175 -44 195 42 0 0 chr10 56966662 56966686 -88622602 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 592 201 60 76 chr10 56966686 56966729 -88622559 + MER20 DNA MER1_type 175 217 -2 1913 148 62 17 chr10 56967437 56967795 -88621493 + THE1C LTR MaLR 1 374 -1 8050 143 22 30 chr10 56967956 56969599 -88619689 + L1PA6 LINE L1 11 1654 -4492 4073 52 20 7 chr10 56969579 56970134 -88619154 + L1PA6 LINE L1 2694 3255 -2891 * 14466 66 1 0 chr10 56970139 56971869 -88617419 + L1PA6 LINE L1 3417 5155 -999 2370 72 0 25 chr10 56971869 56972188 -88617100 + AluY SINE Alu 1 311 0 14466 66 1 0 chr10 56972188 56973190 -88616098 + L1PA6 LINE L1 5155 6154 0 2192 97 10 0 chr10 56973981 56974271 -88615017 - AluSg SINE Alu -17 293 1 1970 150 30 3 chr10 56974344 56974677 -88614611 + MER2 DNA MER2_type 3 344 0 445 296 125 11 chr10 56975086 56975262 -88614026 + MIR SINE MIR 23 218 -44 21 71 0 0 chr10 56975839 56975881 -88613407 + AT_rich Low_complexity Low_complexity 1 42 0 2517 141 29 12 chr10 56976128 56976547 -88612741 + MSTB LTR MaLR 1 426 0 394 320 128 12 chr10 56976624 56976796 -88612492 - MIR SINE MIR -49 213 22 327 25 0 0 chr10 56977125 56977165 -88612123 + (CA)n Simple_repeat Simple_repeat 2 41 0 1871 220 58 27 chr10 56977176 56977657 -88611631 - MLT1D LTR MaLR -5 500 5 453 327 38 13 chr10 56977873 56978032 -88611256 - MIR SINE MIR -48 214 52 21 57 0 0 chr10 56978829 56978864 -88610424 + AT_rich Low_complexity Low_complexity 1 35 0 243 233 27 27 chr10 56980151 56980224 -88609064 + LTR67 LTR ERVL 466 538 -19 2180 91 0 3 chr10 56981203 56981514 -88607774 + AluY SINE Alu 1 310 0 23 33 0 0 chr10 56981944 56981974 -88607314 + AT_rich Low_complexity Low_complexity 1 30 0 192 306 41 41 chr10 56982108 56982206 -88607082 + L2 LINE L2 1935 2032 -1282 4488 111 19 122 chr10 56982398 56983936 -88605352 + pTR5 LTR ERV1 743 2606 0 228 309 0 49 chr10 56984784 56984865 -88604423 - MER5A DNA MER1_type -70 119 43 239 132 0 0 chr10 56984994 56985032 -88604256 + MER4B LTR ERV1 329 366 -244 * 920 131 28 0 chr10 56985025 56985170 -88604118 + MER4E LTR ERV1 618 766 0 279 0 0 0 chr10 56985548 56985579 -88603709 + (TG)n Simple_repeat Simple_repeat 1 31 0 212 378 72 9 chr10 56986308 56986419 -88602869 - L2 LINE L2 -219 3053 2936 22 56 0 0 chr10 56987267 56987303 -88601985 + AT_rich Low_complexity Low_complexity 1 36 0 2452 81 0 0 chr10 56988583 56988891 -88600397 + AluY SINE Alu 1 308 -3 1732 192 115 10 chr10 56988921 56989338 -88599950 + LOR1b LTR ERV1 1 461 0 403 291 34 8 chr10 56989817 56989934 -88599354 - L2 LINE L2 0 3313 3194 25 0 0 0 chr10 56990101 56990126 -88599162 + AT_rich Low_complexity Low_complexity 1 25 0 859 134 0 35 chr10 56991138 56991280 -88598008 - LOR1a LTR ERV1 0 497 361 * 1609 146 27 27 chr10 56991246 56991572 -88597716 + MSTA LTR MaLR 56 401 -27 7454 33 5 0 chr10 56991582 56992514 -88596774 - L1PA4 LINE L1 -3 6152 5219 434 204 0 21 chr10 56992604 56992697 -88596591 + LTR35 LTR ERV1 1 91 -527 1282 70 0 0 chr10 56992864 56993021 -88596267 + AluY SINE Alu 143 299 -12 643 280 34 27 chr10 56993027 56993321 -88595967 + LTR35 LTR ERV1 231 618 0 826 218 16 21 chr10 56993902 56994090 -88595198 + MER58A DNA MER1_type 6 192 -32 1866 241 91 40 chr10 56994096 56994989 -88594299 + L1MC5 LINE L1 6976 7913 -48 21 71 0 0 chr10 56995045 56995087 -88594201 + AT_rich Low_complexity Low_complexity 1 42 0 482 252 39 7 chr10 56997620 56997775 -88591513 - MER103 DNA DNA 0 166 7 654 236 42 55 chr10 56997937 56998174 -88591114 + L2 LINE L2 3080 3313 0 4667 163 32 6 chr10 56999413 57000296 -88588992 - L1MC1 LINE L1 0 6333 5428 1499 241 67 38 chr10 57000901 57001321 -88587967 + MLT1E LTR MaLR 160 591 -2 1950 130 43 0 chr10 57001615 57001914 -88587374 + AluSx SINE Alu 1 312 0 32 0 0 0 chr10 57002308 57002340 -88586948 + AT_rich Low_complexity Low_complexity 1 32 0 182 233 151 14 chr10 57002683 57002756 -88586532 + MIR3 SINE MIR 111 193 -15 21 36 0 0 chr10 57003457 57003485 -88585803 + AT_rich Low_complexity Low_complexity 1 28 0 28 79 0 0 chr10 57003552 57003615 -88585673 + AT_rich Low_complexity Low_complexity 1 63 0 2036 176 67 114 chr10 57003706 57004246 -88585042 - L1MA9 LINE L1 -22 6290 5785 225 0 0 0 chr10 57004246 57004271 -88585017 + (TA)n Simple_repeat Simple_repeat 2 26 0 2036 176 67 114 chr10 57004271 57004390 -88584898 - L1MA9 LINE L1 -527 5785 5662 821 188 6 6 chr10 57004374 57004544 -88584744 + L1M2 LINE L1 5302 5471 -820 * 847 249 35 0 chr10 57004544 57004741 -88584547 + MER70B LTR ERVL 375 578 0 1256 199 19 4 chr10 57004741 57005003 -88584285 - L1MC2 LINE L1 -302 6042 5777 2108 106 3 3 chr10 57005171 57005463 -88583825 - AluSg1 SINE Alu -17 292 1 2376 71 0 3 chr10 57006464 57006773 -88582515 + AluY SINE Alu 1 308 -3 591 112 0 0 chr10 57007140 57007229 -88582059 + (TA)n Simple_repeat Simple_repeat 2 90 0 230 344 91 46 chr10 57007937 57008178 -88581110 + MLT1J LTR MaLR 13 264 -247 335 260 20 123 chr10 57009124 57009270 -88580018 - MLT1J2 LTR MaLR -281 169 39 512 237 0 0 chr10 57010366 57010463 -88578825 - Tigger7 DNA MER2_type -1 2490 2394 1388 181 60 4 chr10 57010470 57010718 -88578570 - Tigger7 DNA MER2_type -471 262 1 542 226 34 126 chr10 57011483 57011651 -88577637 + MLT1A2 LTR MaLR 158 299 -75 2326 97 3 0 chr10 57011651 57011959 -88577329 + AluY SINE Alu 1 309 -2 542 226 34 126 chr10 57011959 57012029 -88577259 + MLT1A2 LTR MaLR 299 374 0 302 283 19 19 chr10 57012045 57012151 -88577137 + L1MC4 LINE L1 6597 6702 -1340 261 182 0 34 chr10 57012152 57012240 -88577048 + (TA)n Simple_repeat Simple_repeat 2 86 0 207 139 0 0 chr10 57012253 57012289 -88576999 + (CA)n Simple_repeat Simple_repeat 2 37 0 21 57 0 0 chr10 57012529 57012564 -88576724 + AT_rich Low_complexity Low_complexity 1 35 0 298 319 109 0 chr10 57012917 57013055 -88576233 - MIR SINE MIR -12 250 98 25 31 0 0 chr10 57014588 57014620 -88574668 + AT_rich Low_complexity Low_complexity 1 32 0 27 0 0 0 chr10 57014864 57014891 -88574397 + AT_rich Low_complexity Low_complexity 1 27 0 785 213 0 19 chr10 57015198 57015353 -88573935 - FRAM SINE Alu -30 146 1 789 312 128 22 chr10 57016265 57016756 -88572532 + L2 LINE L2 1973 2515 -799 217 315 49 60 chr10 57016851 57017035 -88572253 + L2 LINE L2 2709 2890 -424 428 262 167 52 chr10 57017121 57017331 -88571957 + L2 LINE L2 3078 3311 -2 260 225 22 39 chr10 57017331 57017513 -88571775 + (TTTA)n Simple_repeat Simple_repeat 1 179 0 53 0 0 0 chr10 57017513 57017566 -88571722 + AT_rich Low_complexity Low_complexity 1 53 0 1941 128 0 10 chr10 57018092 57018389 -88570899 - AluSg SINE Alu -16 294 1 22 0 0 0 chr10 57018397 57018419 -88570869 + AT_rich Low_complexity Low_complexity 1 22 0 208 206 0 29 chr10 57019339 57019407 -88569881 + CT-rich Low_complexity Low_complexity 1 66 0 34 99 0 0 chr10 57019750 57019861 -88569427 + AT_rich Low_complexity Low_complexity 1 111 0 1325 206 53 32 chr10 57019861 57019966 -88569322 - AluJo SINE Alu -25 287 186 2507 128 3 3 chr10 57019966 57020341 -88568947 + THE1C LTR MaLR 1 375 0 1325 206 53 32 chr10 57020341 57020516 -88568772 - AluJo SINE Alu -126 186 1 23 97 0 0 chr10 57020631 57020703 -88568585 + AT_rich Low_complexity Low_complexity 1 72 0 18023 96 13 6 chr10 57020836 57023370 -88565918 + L1PA5 LINE L1 1 2553 -3593 17032 63 0 1 chr10 57023379 57026398 -88562890 + L1PA5 LINE L1 3137 6152 -2 1805 167 11 0 chr10 57026974 57027261 -88562027 - AluSx SINE Alu -22 290 1 29 94 0 0 chr10 57027358 57027443 -88561845 + AT_rich Low_complexity Low_complexity 1 85 0 316 324 72 43 chr10 57027503 57027710 -88561578 + L2 LINE L2 1932 2144 -1170 5561 166 21 7 chr10 57027718 57029181 -88560107 - L1PA16 LINE L1 0 6166 4692 198 0 0 0 chr10 57029228 57029250 -88560038 + (TTCA)n Simple_repeat Simple_repeat 3 24 0 189 291 151 0 chr10 57029365 57029451 -88559837 + L2 LINE L2 2872 2970 -302 2828 158 9 2 chr10 57029712 57030170 -88559118 + LOR1a LTR ERV1 13 473 -24 1392 145 41 0 chr10 57030170 57030391 -88558897 + MER30 DNA MER1_type 1 230 0 466 118 0 0 chr10 57030462 57030530 -88558758 - THE1C LTR MaLR -307 68 1 9714 128 39 6 chr10 57030530 57032060 -88557228 - THE1C-int LTR MaLR 0 1580 1 2360 137 13 5 chr10 57032060 57032432 -88556856 - THE1C LTR MaLR 0 375 1 2179 118 0 7 chr10 57032886 57033191 -88556097 + AluSx SINE Alu 1 303 -9 7599 30 0 0 chr10 57034340 57035784 -88553504 + L1PA4 LINE L1 4712 6155 0 255 31 0 0 chr10 57036170 57036202 -88553086 + (TG)n Simple_repeat Simple_repeat 2 33 0 184 273 78 26 chr10 57036961 57037038 -88552250 + L2 LINE L2 3005 3085 -187 2395 90 0 3 chr10 57037091 57037403 -88551885 - AluY SINE Alu 0 311 1 272 271 111 60 chr10 57037835 57038034 -88551254 + MLT1H LTR MaLR 123 331 -218 240 300 100 0 chr10 57038853 57038943 -88550345 - MIR SINE MIR -4 258 160 479 193 46 0 chr10 57038943 57039052 -88550236 - L1MB1 LINE L1 0 6168 6055 3626 166 28 36 chr10 57039066 57039819 -88549469 + L1MB1 LINE L1 5297 6043 -125 527 262 7 28 chr10 57039819 57039964 -88549324 - MIR SINE MIR -108 154 13 527 338 131 28 chr10 57039966 57040439 -88548849 + HAL1b LINE L1 221 742 -606 22 0 0 0 chr10 57040472 57040494 -88548794 + AT_rich Low_complexity Low_complexity 1 22 0 1337 209 64 32 chr10 57041810 57042154 -88547134 - MER57B LTR ERV1 0 434 80 248 139 74 8 chr10 57043454 57043576 -88545712 + (TA)n Simple_repeat Simple_repeat 1 130 0 7203 131 86 116 chr10 57043602 57045351 -88543937 + pTR5 LTR ERV1 741 2437 -1 355 285 35 35 chr10 57046280 57046424 -88542864 - L2 LINE L2 0 3313 3170 188 394 15 0 chr10 57047353 57047419 -88541869 + L2 LINE L2 3115 3181 -91 22 0 0 0 chr10 57047987 57048009 -88541279 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr10 57048077 57048099 -88541189 + AT_rich Low_complexity Low_complexity 1 22 0 237 278 9 113 chr10 57049405 57049520 -88539768 - L2 LINE L2 -5 3267 3165 28 0 0 0 chr10 57049720 57049748 -88539540 + AT_rich Low_complexity Low_complexity 1 28 0 2234 106 0 3 chr10 57051739 57052042 -88537246 + AluSx SINE Alu 1 302 -10 13627 138 50 6 chr10 57052490 57055015 -88534273 + L1MA3 LINE L1 1241 3876 -3689 186 189 0 0 chr10 57055015 57055052 -88534236 + (TA)n Simple_repeat Simple_repeat 2 38 0 257 204 0 0 chr10 57055054 57055103 -88534185 - L1MC4 LINE L1 -1338 6704 6656 * 1915 253 15 4 chr10 57055091 57055612 -88533676 + L1MA3 LINE L1 3866 4392 -3173 231 289 31 0 chr10 57055822 57055919 -88533369 + LTR30 LTR ERV1 544 643 -79 531 174 11 11 chr10 57055925 57056017 -88533271 + LTR12 LTR ERV1 486 577 -137 10778 176 14 19 chr10 57056018 57057338 -88531950 + L1MA3 LINE L1 4386 5712 -2012 405 0 0 0 chr10 57057338 57057383 -88531905 + (CA)n Simple_repeat Simple_repeat 2 46 0 10778 176 14 19 chr10 57057383 57058961 -88530327 + L1MA3 LINE L1 5712 7267 -457 16658 230 46 21 chr10 57062454 57068889 -88520399 + L1PA16 LINE L1 1 6682 -922 195 42 0 0 chr10 57068889 57068913 -88520375 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 16658 230 46 21 chr10 57068913 57069860 -88519428 + L1PA16 LINE L1 6682 7604 0 2161 128 0 3 chr10 57069977 57070281 -88519007 - AluSq SINE Alu -10 303 1 2313 174 16 20 chr10 57070315 57070762 -88518526 + L1PA16 LINE L1 7152 7596 -8 180 0 0 0 chr10 57071239 57071259 -88518029 + (TAAAAA)n Simple_repeat Simple_repeat 3 22 0 229 329 35 0 chr10 57072607 57072692 -88516596 - MIR SINE MIR -126 136 49 237 230 0 0 chr10 57073564 57073638 -88515650 + GA-rich Low_complexity Low_complexity 1 74 0 24 0 0 0 chr10 57073785 57073809 -88515479 + AT_rich Low_complexity Low_complexity 1 24 0 356 358 47 46 chr10 57074279 57074796 -88514492 + L2 LINE L2 2616 3216 -56 242 343 30 20 chr10 57075088 57075187 -88514101 + MER5A DNA MER1_type 7 106 -83 23 54 0 0 chr10 57075584 57075621 -88513667 + AT_rich Low_complexity Low_complexity 1 37 0 392 179 63 0 chr10 57075692 57075787 -88513501 - MER53 DNA DNA -84 105 5 25 0 0 0 chr10 57076605 57076630 -88512658 + AT_rich Low_complexity Low_complexity 1 25 0 319 263 40 10 chr10 57076697 57076796 -88512492 - MIR SINE MIR -56 206 105 243 328 16 0 chr10 57076820 57076884 -88512404 + L2 LINE L2 3207 3271 -1 1243 267 111 50 chr10 57078163 57078459 -88510829 - MLT1E2 LTR MaLR -3 623 284 2350 84 0 0 chr10 57078459 57078756 -88510532 - AluSg SINE Alu -13 297 1 1243 267 111 50 chr10 57078756 57078954 -88510334 - MLT1E2 LTR MaLR -342 284 99 1626 185 3 3 chr10 57079032 57079329 -88509959 - AluJb SINE Alu -15 297 1 508 88 0 0 chr10 57079572 57079640 -88509648 - L1PA3 LINE L1 -2263 3883 3816 12434 32 5 0 chr10 57079640 57081911 -88507377 + L1PA3 LINE L1 3875 6155 0 255 31 0 0 chr10 57082297 57082329 -88506959 + (TG)n Simple_repeat Simple_repeat 2 33 0 2365 90 0 3 chr10 57083215 57083527 -88505761 - AluY SINE Alu 0 311 1 261 271 111 60 chr10 57083959 57084158 -88505130 + MLT1H LTR MaLR 123 331 -218 245 300 100 0 chr10 57084977 57085067 -88504221 - MIR SINE MIR -4 258 160 490 193 46 0 chr10 57085067 57085176 -88504112 - L1MB1 LINE L1 0 6168 6055 1202 188 23 62 chr10 57085190 57085498 -88503790 + L1M3 LINE L1 5297 5592 -576 7211 18 1 0 chr10 57085616 57086452 -88502836 + L1PA3 LINE L1 5319 6155 0 405 359 26 35 chr10 57088331 57088643 -88500645 - MLT1I LTR MaLR -37 372 64 30 0 0 0 chr10 57089530 57089560 -88499728 + AT_rich Low_complexity Low_complexity 1 30 0 1543 147 65 84 chr10 57090239 57090621 -88498667 - THE1C LTR MaLR 0 375 1 317 271 131 33 chr10 57090737 57090951 -88498337 - MER106A DNA MER1_type -1 235 1 12681 154 16 45 chr10 57092731 57095221 -88494067 + Tigger1 DNA MER2_type 1 2418 0 897 330 29 6 chr10 57095824 57096170 -88493118 - LTR16A LTR ERVL -2 448 95 216 348 96 30 chr10 57096573 57096708 -88492580 - MIR SINE MIR -71 191 48 2119 117 35 44 chr10 57097687 57098054 -88491234 + THE1B LTR MaLR 1 364 0 189 341 16 49 chr10 57099091 57099214 -88490074 - L2 LINE L2 -96 3217 3099 229 318 87 80 chr10 57099353 57099617 -88489671 + L3 LINE CR1 339 604 -973 464 312 43 32 chr10 57099659 57099845 -88489443 - MIR SINE MIR -34 228 41 * 944 256 77 65 chr10 57099835 57100406 -88488882 - L2 LINE L2 -139 3174 2579 1680 172 27 7 chr10 57100893 57101190 -88488098 - AluJb SINE Alu -7 305 3 787 272 131 67 chr10 57102938 57104283 -88485005 + L1ME3A LINE L1 4672 6116 -48 276 111 14 83 chr10 57104901 57104973 -88484315 - L1PA16 LINE L1 0 6166 6100 812 115 0 0 chr10 57105119 57105232 -88484056 + AluSc SINE Alu 184 296 -13 1678 183 153 17 chr10 57105232 57105636 -88483652 + MER50 LTR ERV1 253 711 -23 281 227 9 37 chr10 57105637 57105775 -88483513 - L1ME LINE L1 -722 5432 5297 1073 101 0 57 chr10 57106318 57106476 -88482812 - AluSq/x SINE Alu -162 150 2 1567 147 15 4 chr10 57106476 57106741 -88482547 - L1MC1 LINE L1 -505 5828 5561 576 152 34 0 chr10 57106846 57106959 -88482329 + L1MC/D LINE L1 5485 5605 -578 22 0 0 0 chr10 57107056 57107078 -88482210 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr10 57107247 57107270 -88482018 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr10 57107668 57107698 -88481590 + AT_rich Low_complexity Low_complexity 1 30 0 670 93 0 0 chr10 57110514 57110611 -88478677 + AluY SINE Alu 201 297 -14 22 56 0 0 chr10 57110611 57110647 -88478641 + AT_rich Low_complexity Low_complexity 1 36 0 2242 110 0 0 chr10 57111182 57111491 -88477797 + AluSg1 SINE Alu 1 309 0 1393 226 37 92 chr10 57112313 57112800 -88476488 - L1 LINE L1 -1628 4518 4059 184 273 0 0 chr10 57113463 57113507 -88475781 - MIR SINE MIR -75 133 90 1824 226 2 16 chr10 57113917 57114350 -88474938 - L1 LINE L1 -3104 3042 2616 1940 136 4 0 chr10 57114370 57114649 -88474639 - AluY SINE Alu -31 280 1 3738 182 9 39 chr10 57114670 57115468 -88473820 + L1MB3 LINE L1 5298 6071 -112 281 250 26 20 chr10 57116169 57116321 -88472967 + (TA)n Simple_repeat Simple_repeat 2 154 0 201 74 0 0 chr10 57116349 57116376 -88472912 + (CATA)n Simple_repeat Simple_repeat 2 28 0 1270 239 9 54 chr10 57116917 57117469 -88471819 - L1 LINE L1 -3173 4392 3866 262 250 0 33 chr10 57117474 57117566 -88471722 - L1MC4 LINE L1 -1340 6702 6614 245 269 0 32 chr10 57117485 57117578 -88471710 + L1MC4 LINE L1 6614 6703 -1339 * 7000 130 31 12 chr10 57117577 57119036 -88470252 - L1 LINE L1 -3689 3876 2389 21 71 0 0 chr10 57119602 57119644 -88469644 + AT_rich Low_complexity Low_complexity 1 42 0 245 250 4 0 chr10 57120310 57120389 -88468899 + L1MC/D LINE L1 5587 5667 -677 1528 169 33 33 chr10 57120723 57121024 -88468264 + AluJo SINE Alu 12 312 0 590 143 0 22 chr10 57121100 57121191 -88468097 + AluS SINE Alu 1 89 -223 480 308 48 13 chr10 57122830 57123057 -88466231 - LTR16C LTR ERVL 0 491 257 4749 206 125 18 chr10 57123256 57124768 -88464520 + MER52A LTR ERV1 1 1755 0 350 310 181 0 chr10 57125101 57125256 -88464032 - L2 LINE L2 -558 2756 2574 2144 124 6 13 chr10 57126057 57126372 -88462916 - AluSq SINE Alu 0 313 1 499 332 31 22 chr10 57127602 57127825 -88461463 + MIR SINE MIR 21 245 -17 25 51 0 0 chr10 57127825 57127864 -88461424 + AT_rich Low_complexity Low_complexity 1 39 0 266 238 0 0 chr10 57128398 57128461 -88460827 - MIR SINE MIR 0 262 200 629 260 6 61 chr10 57128588 57128769 -88460519 + MER5A DNA MER1_type 3 173 -16 1966 118 42 121 chr10 57129075 57129321 -88459967 + L1MA4A LINE L1 5821 6085 -218 2241 125 3 3 chr10 57129321 57129632 -88459656 + AluSp SINE Alu 1 311 -2 1966 118 42 121 chr10 57129632 57129705 -88459583 + L1MA4A LINE L1 6085 6162 -141 2329 137 17 0 chr10 57129705 57130062 -88459226 + THE1B LTR MaLR 2 364 0 9906 116 33 40 chr10 57130062 57131652 -88457636 + THE1B-int LTR MaLR 1 1578 -2 2298 126 31 8 chr10 57131654 57132010 -88457278 + THE1B LTR MaLR 1 364 0 1966 118 42 121 chr10 57132010 57132204 -88457084 + L1MA4A LINE L1 6162 6298 -5 22 56 0 0 chr10 57133639 57133675 -88455613 + AT_rich Low_complexity Low_complexity 1 36 0 501 362 107 16 chr10 57134114 57134487 -88454801 + L2 LINE L2 2261 2667 -647 2390 131 25 3 chr10 57135199 57135566 -88453722 - THE1C LTR MaLR 0 375 1 8853 137 42 43 chr10 57135566 57137147 -88452141 - THE1C-int LTR MaLR 0 1580 1 2470 128 5 8 chr10 57137147 57137523 -88451765 - THE1C LTR MaLR 0 375 1 2395 251 31 7 chr10 57137549 57137681 -88451607 + L1 LINE L1 2953 3080 -3066 207 0 0 0 chr10 57137681 57137704 -88451584 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2395 251 31 7 chr10 57137704 57138380 -88450908 + L1 LINE L1 3080 3780 -2366 2058 126 3 3 chr10 57138396 57138690 -88450598 + AluSg SINE Alu 1 294 -16 5059 200 32 14 chr10 57138690 57140920 -88448368 + L1PA16 LINE L1 3896 6166 0 32 26 0 0 chr10 57141440 57141479 -88447809 + AT_rich Low_complexity Low_complexity 1 39 0 36 0 0 0 chr10 57141988 57142024 -88447264 + AT_rich Low_complexity Low_complexity 1 36 0 1107 302 73 14 chr10 57142172 57142609 -88446679 + L2 LINE L2 2851 3313 0 192 238 48 0 chr10 57142668 57142710 -88446578 - MIR SINE MIR -190 72 29 225 308 19 39 chr10 57143024 57143128 -88446160 + MIR SINE MIR 156 257 -5 22 0 0 0 chr10 57143659 57143681 -88445607 + AT_rich Low_complexity Low_complexity 1 22 0 959 273 114 86 chr10 57144375 57145013 -88444275 - L2 LINE L2 -613 2701 2046 401 279 117 70 chr10 57146813 57147171 -88442117 + L1MB5 LINE L1 103 477 -6065 3311 215 27 48 chr10 57147282 57148685 -88440603 + L1MB5 LINE L1 5291 6665 -7 334 279 44 7 chr10 57148976 57149112 -88440176 - MIR SINE MIR -44 218 78 572 311 234 18 chr10 57149131 57149469 -88439819 + L2 LINE L2 263 673 -2641 1041 191 82 54 chr10 57149535 57149829 -88439459 - MLT1A1 LTR MaLR -63 302 1 705 360 150 9 chr10 57149829 57150655 -88438633 + L2 LINE L2 2315 3257 -56 387 0 0 0 chr10 57151186 57151229 -88438059 + (TG)n Simple_repeat Simple_repeat 2 44 0 25 0 0 0 chr10 57151333 57151358 -88437930 + AT_rich Low_complexity Low_complexity 1 25 0 2233 100 0 0 chr10 57152214 57152503 -88436785 + AluSq SINE Alu 1 289 -24 1140 162 0 0 chr10 57152862 57153035 -88436253 + AluSg/x SINE Alu 136 308 -2 24 32 0 0 chr10 57153306 57153337 -88435951 + AT_rich Low_complexity Low_complexity 1 31 0 1395 234 51 24 chr10 57154379 57154831 -88434457 - L1ME3A LINE L1 -28 6142 5679 21 36 0 0 chr10 57154831 57154859 -88434429 + AT_rich Low_complexity Low_complexity 1 28 0 198 91 0 0 chr10 57155239 57155272 -88434016 + (A)n Simple_repeat Simple_repeat 1 33 0 284 374 55 29 chr10 57156318 57156556 -88432732 + MIR SINE MIR 12 255 -7 1930 145 75 20 chr10 57156917 57157262 -88432026 + THE1B LTR MaLR 1 364 0 1565 191 3 31 chr10 57157594 57157888 -88431400 + AluJb SINE Alu 1 286 -26 23 68 0 0 chr10 57157888 57157932 -88431356 + AT_rich Low_complexity Low_complexity 1 44 0 569 269 85 60 chr10 57157932 57158214 -88431074 + L1M4b LINE L1 107 395 -6464 16383 86 19 18 chr10 57158225 57160465 -88428823 - HERVL LTR ERVL -3073 2581 336 2401 87 0 3 chr10 57160465 57160777 -88428511 + AluY SINE Alu 1 311 0 16383 86 19 18 chr10 57160777 57160907 -88428381 - HERVL LTR ERVL -5318 336 208 999 129 7 0 chr10 57161033 57161173 -88428115 - AluSq/x SINE Alu -172 141 1 3150 230 48 15 chr10 57162609 57163388 -88425900 + L1MB8 LINE L1 4757 5604 -574 2271 157 34 7 chr10 57163388 57163801 -88425487 - MSTA LTR MaLR 0 428 5 3150 230 48 15 chr10 57163801 57164396 -88424892 + L1MB8 LINE L1 5604 6178 0 2523 143 33 2 chr10 57165073 57165492 -88423796 + MSTB1 LTR MaLR 1 432 0 28 71 0 0 chr10 57166340 57166396 -88422892 + AT_rich Low_complexity Low_complexity 1 56 0 345 225 63 27 chr10 57166409 57166520 -88422768 + L2 LINE L2 2519 2633 -681 618 173 10 0 chr10 57166926 57167030 -88422258 - FLAM_A SINE Alu -19 123 19 1454 128 0 0 chr10 57167034 57167245 -88422043 - AluY SINE Alu -1 310 100 234 207 17 17 chr10 57167246 57167304 -88421984 - MIR SINE MIR -116 146 89 1139 96 0 0 chr10 57167306 57167452 -88421836 + AluSg/x SINE Alu 157 302 -10 807 109 0 34 chr10 57167473 57167592 -88421696 - AluY SINE Alu -196 115 1 456 178 11 0 chr10 57167737 57167827 -88421461 - L1MB5 LINE L1 -7 6167 6077 319 360 0 0 chr10 57168242 57168417 -88420871 + G-rich Low_complexity Low_complexity 1 175 0 * 340 239 22 44 chr10 57168307 57168487 -88420801 + (CGGGG)n Simple_repeat Simple_repeat 3 178 0 1134 205 14 27 chr10 57168504 57168801 -88420487 - L1M1 LINE L1 -7183 382 90 323 284 65 32 chr10 57170033 57170188 -88419100 - L1 LINE L1 -1101 5045 4886 2002 222 43 6 chr10 57170632 57171172 -88418116 - L1MB8 LINE L1 -4 6174 5615 2767 81 78 0 chr10 57171176 57171572 -88417716 + MLT2A2 LTR ERVL 1 427 -26 301 176 0 0 chr10 57171591 57171642 -88417646 + L1MC4 LINE L1 6653 6703 -1339 333 102 0 83 chr10 57171642 57171722 -88417566 + MLT2A2 LTR ERVL 399 453 0 846 101 47 47 chr10 57172032 57172180 -88417108 - AluSq/x SINE Alu -165 148 1 327 121 103 0 chr10 57172213 57172271 -88417017 + AluJ/FLAM SINE Alu 1 64 -238 3910 58 0 14 chr10 57173284 57173784 -88415504 - L1P LINE L1 -5653 493 1 234 286 0 13 chr10 57174162 57174239 -88415049 + CT-rich Low_complexity Low_complexity 2 77 0 6272 130 27 9 chr10 57175558 57176725 -88412563 + LOR1-int LTR ERV1 3306 4530 -3590 415 208 20 20 chr10 57177277 57177378 -88411910 + LTR16B LTR ERVL 364 464 0 25 0 0 0 chr10 57179562 57179587 -88409701 + AT_rich Low_complexity Low_complexity 1 25 0 387 0 0 0 chr10 57179691 57179734 -88409554 + (CA)n Simple_repeat Simple_repeat 2 44 0 458 356 106 8 chr10 57180269 57180648 -88408640 - L2 LINE L2 -65 3248 2833 1372 217 33 36 chr10 57181176 57181770 -88407518 + MER52A LTR ERV1 1082 1755 0 298 186 154 30 chr10 57183130 57183241 -88406047 - MIR SINE MIR -65 143 33 246 132 29 15 chr10 57184500 57184568 -88404720 + (TA)n Simple_repeat Simple_repeat 2 70 0 292 351 39 34 chr10 57184743 57184948 -88404340 - L3 LINE CR1 -99 1478 1273 191 362 164 14 chr10 57185004 57185291 -88403997 - L3 LINE CR1 -820 757 428 1879 106 7 66 chr10 57186417 57186741 -88402547 + AluSx SINE Alu 1 306 0 550 210 16 16 chr10 57186793 57186917 -88402371 - MER20 DNA MER1_type 0 219 96 1176 186 42 0 chr10 57187052 57187267 -88402021 - LOR1b-int LTR ERV1 -7896 224 1 2270 171 57 7 chr10 57187267 57187706 -88401582 - LOR1b LTR ERV1 0 461 1 651 100 11 0 chr10 57187706 57187796 -88401492 - LOR1b-int LTR ERV1 0 8120 8030 * 1422 176 44 7 chr10 57187795 57188068 -88401220 - LOR1-int LTR ERV1 -2056 6064 5782 * 2018 143 72 38 chr10 57188048 57188518 -88400770 - LOR1-int LTR ERV1 -2597 5523 5038 3035 232 22 21 chr10 57188780 57189456 -88399832 + MER52A LTR ERV1 1079 1755 0 467 179 190 16 chr10 57189567 57189751 -88399537 - MER5C DNA MER1_type -95 229 14 542 319 86 37 chr10 57190117 57190500 -88398788 + MLT1K LTR MaLR 183 584 -4 450 313 28 28 chr10 57191308 57191487 -88397801 - MLT1I LTR MaLR -1 408 230 306 0 0 0 chr10 57193016 57193050 -88396238 + (TG)n Simple_repeat Simple_repeat 2 35 0 414 213 82 127 chr10 57193946 57194190 -88395098 + L1ME3A LINE L1 5934 6166 -4 261 0 0 0 chr10 57195529 57195558 -88393730 + (TG)n Simple_repeat Simple_repeat 2 30 0 738 113 7 71 chr10 57195882 57196023 -88393265 - FLAM_C SINE Alu -1 132 1 1350 107 0 21 chr10 57197953 57198175 -88391113 + AluSg/x SINE Alu 100 317 0 310 211 89 22 chr10 57198576 57198666 -88390622 + MIR SINE MIR 58 153 -109 365 300 0 8 chr10 57198898 57199018 -88390270 + L2 LINE L2 2934 3052 -220 244 220 0 51 chr10 57199134 57199193 -88390095 + L2 LINE L2 3217 3272 0 1958 153 0 17 chr10 57199285 57199580 -88389708 + AluSx SINE Alu 1 290 -22 22 225 0 0 chr10 57199624 57199664 -88389624 + AT_rich Low_complexity Low_complexity 1 40 0 382 158 33 55 chr10 57199664 57199895 -88389393 + (TTATA)n Simple_repeat Simple_repeat 1 225 0 48 20 0 0 chr10 57199895 57199945 -88389343 + AT_rich Low_complexity Low_complexity 1 50 0 1036 179 12 0 chr10 57200130 57200303 -88388985 - FAM SINE Alu 0 175 1 181 280 161 0 chr10 57200315 57200408 -88388880 + L2 LINE L2 2678 2785 -529 308 311 76 62 chr10 57200603 57200828 -88388460 + L2 LINE L2 3025 3252 -20 1478 208 53 28 chr10 57201456 57201812 -88387476 + MLT1A1 LTR MaLR 1 365 0 1066 282 27 81 chr10 57201952 57202435 -88386853 + LTR16A1 LTR ERVL 1 457 0 1535 165 67 0 chr10 57203408 57203705 -88385583 - L1MB3 LINE L1 -3 6180 5864 4288 160 33 5 chr10 57203733 57204482 -88384806 - L1PA16 LINE L1 0 6166 5397 28 86 0 0 chr10 57205273 57205343 -88383945 + GC_rich Low_complexity Low_complexity 1 70 0 631 226 7 78 chr10 57205686 57205982 -88383306 + AluY SINE Alu 2 276 -35 4716 261 16 35 chr10 57206307 57208066 -88381222 - L1PA15-16 LINE L1 -2700 4149 2423 268 81 0 0 chr10 57208063 57208100 -88381188 + L1PA7 LINE L1 5924 5960 -194 * 644 170 37 15 chr10 57209393 57209528 -88379760 - L1PA15-16 LINE L1 -5051 1798 1661 * 1127 194 31 0 chr10 57209523 57209719 -88379569 - L1PA15-16 LINE L1 -6647 202 1 1590 215 44 20 chr10 57209732 57209801 -88379487 - L1PA16 LINE L1 -1089 5057 4991 2249 99 0 0 chr10 57209801 57210120 -88379168 - AluY SINE Alu 0 319 1 1590 215 44 20 chr10 57210120 57210501 -88378787 - L1PA16 LINE L1 -1155 4991 4595 2021 177 45 26 chr10 57210505 57210928 -88378360 + MER52A LTR ERV1 744 1174 -581 5343 127 9 3 chr10 57211059 57211831 -88377457 + THE1B-int LTR MaLR 804 1580 0 2336 126 31 8 chr10 57211831 57212187 -88377101 + THE1B LTR MaLR 1 364 0 1038 153 63 0 chr10 57212190 57212380 -88376908 + L1MA4A LINE L1 6097 6298 -5 1801 101 8 12 chr10 57212643 57212891 -88376397 - AluSg SINE Alu -62 248 2 360 315 85 15 chr10 57212891 57213021 -88376267 - MLT1H1 LTR MaLR -317 238 100 235 257 50 79 chr10 57213148 57213249 -88376039 - MLT1H1 LTR MaLR -444 98 1 677 165 8 0 chr10 57213625 57213752 -88375536 - L1MB8 LINE L1 -2 6176 6049 1342 139 0 5 chr10 57213752 57213953 -88375335 - AluJb SINE Alu -17 295 96 1007 117 0 0 chr10 57214434 57214571 -88374717 + AluJb SINE Alu 163 299 -13 197 268 61 0 chr10 57214576 57214658 -88374630 - L2 LINE L2 -360 2912 2826 451 312 121 54 chr10 57215156 57215470 -88373818 + L2 LINE L2 2924 3258 -14 192 264 0 19 chr10 57216316 57216369 -88372919 + MIR SINE MIR 156 207 -55 202 135 0 27 chr10 57217413 57217450 -88371838 + (TTTTC)n Simple_repeat Simple_repeat 2 37 0 594 322 4 15 chr10 57217450 57217885 -88371403 + CT-rich Low_complexity Low_complexity 1 430 0 449 333 6 22 chr10 57217897 57218077 -88371211 + C-rich Low_complexity Low_complexity 4 180 0 302 305 29 23 chr10 57218086 57218260 -88371028 + CT-rich Low_complexity Low_complexity 3 177 0 195 390 0 0 chr10 57218266 57218343 -88370945 + C-rich Low_complexity Low_complexity 1 77 0 4774 50 2 2 chr10 57218489 57219074 -88370214 - L1PA7 LINE L1 -265 5889 5305 1971 60 36 0 chr10 57219074 57219325 -88369963 + L1PA7 LINE L1 5895 6154 0 356 297 150 18 chr10 57220472 57220745 -88368543 + MLT1J1 LTR MaLR 137 445 -1 202 244 0 0 chr10 57220755 57220800 -88368488 - MIR SINE MIR -109 153 109 600 200 0 0 chr10 57220961 57221061 -88368227 - AluJo SINE Alu -79 233 134 2340 84 7 0 chr10 57221061 57221360 -88367928 - AluSp SINE Alu -11 302 2 949 10 0 0 chr10 57221388 57221490 -88367798 + AluY SINE Alu 195 296 -15 740 202 0 0 chr10 57221490 57221614 -88367674 - AluJo SINE Alu -187 125 2 1618 184 41 10 chr10 57221619 57221913 -88367375 - AluJb SINE Alu -8 304 2 654 137 6 80 chr10 57222120 57222295 -88366993 - AluSc SINE Alu -16 293 132 2422 129 17 0 chr10 57224462 57224819 -88364469 + THE1B LTR MaLR 2 364 0 22 0 0 0 chr10 57226556 57226578 -88362710 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr10 57226655 57226686 -88362602 + AT_rich Low_complexity Low_complexity 1 31 0 1724 146 4 0 chr10 57226840 57227100 -88362188 + AluSx SINE Alu 38 298 -14 803 213 0 6 chr10 57227630 57227790 -88361498 + AluJb SINE Alu 37 195 -117 930 302 56 40 chr10 57227890 57228320 -88360968 + MLT1K LTR MaLR 152 588 0 810 180 0 0 chr10 57228369 57228497 -88360791 + FLAM_A SINE Alu 2 129 -4 34 0 0 0 chr10 57228530 57228564 -88360724 + AT_rich Low_complexity Low_complexity 1 34 0 298 245 137 7 chr10 57228945 57229084 -88360204 - MIR SINE MIR -58 204 48 23 68 0 0 chr10 57229149 57229193 -88360095 + AT_rich Low_complexity Low_complexity 1 44 0 401 253 108 62 chr10 57230246 57230440 -88358848 - L1MEc LINE L1 -4483 2028 1741 287 205 39 154 chr10 57230468 57230551 -88358737 - L1MEc LINE L1 -4765 1661 1603 2159 154 6 14 chr10 57230551 57230902 -88358386 + MER7A DNA MER2_type 1 346 0 287 205 39 154 chr10 57230902 57230974 -88358314 - L1MEc LINE L1 -4823 1603 1524 363 182 0 182 chr10 57230975 57231062 -88358226 + MLT2B2 LTR ERVL 408 465 -50 446 0 19 0 chr10 57231062 57231116 -88358172 + (TCTA)n Simple_repeat Simple_repeat 3 57 0 363 182 0 182 chr10 57231116 57231160 -88358128 + MLT2B2 LTR ERVL 465 515 0 872 290 26 31 chr10 57231160 57231512 -88357776 - L1MEc LINE L1 -5801 806 457 284 256 67 72 chr10 57231777 57231957 -88357331 - L1MC4 LINE L1 -1389 6653 6475 2504 138 43 47 chr10 57232224 57232759 -88356529 - L1MA3 LINE L1 0 7724 7192 1141 208 26 7 chr10 57232787 57233102 -88356186 - L1MA3 LINE L1 -367 7220 6323 * 2331 167 64 7 chr10 57233096 57233231 -88356057 - L1MA3 LINE L1 -6499 1066 940 249 33 0 0 chr10 57233231 57233261 -88356027 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 2331 167 64 7 chr10 57233261 57233561 -88355727 - L1MA3 LINE L1 -6625 940 606 267 93 0 0 chr10 57234244 57234287 -88355001 + (TG)n Simple_repeat Simple_repeat 2 44 0 985 114 13 7 chr10 57235008 57235157 -88354131 + AluSg/x SINE Alu 158 307 -3 370 200 37 172 chr10 57235340 57235364 -88353924 + MIR SINE MIR 76 102 -160 2012 140 3 13 chr10 57235364 57235671 -88353617 - AluJb SINE Alu -8 304 1 370 200 37 172 chr10 57235671 57235767 -88353521 + MIR SINE MIR 102 209 -53 1235 105 34 94 chr10 57235767 57235980 -88353308 - L1MA8 LINE L1 -2 6289 6094 1468 158 146 0 chr10 57235980 57236111 -88353177 - AluSx SINE Alu -21 291 180 414 0 0 0 chr10 57236111 57236157 -88353131 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 1468 158 146 0 chr10 57236157 57236279 -88353009 - AluSx SINE Alu -132 180 1 1235 105 34 94 chr10 57236279 57236332 -88352956 - L1MA8 LINE L1 -197 6094 6039 370 200 37 172 chr10 57236332 57236425 -88352863 + MIR SINE MIR 209 261 -1 306 0 0 0 chr10 57236951 57236985 -88352303 + (CA)n Simple_repeat Simple_repeat 2 35 0 2111 82 3 21 chr10 57237091 57237373 -88351915 + AluSx SINE Alu 1 277 -35 423 0 0 0 chr10 57237377 57237424 -88351864 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 895 269 179 8 chr10 57237644 57238030 -88351258 - Tigger8 DNA MER2_type -53 613 162 1241 216 0 4 chr10 57238612 57238848 -88350440 - AluJo SINE Alu -77 235 1 21 0 0 0 chr10 57238914 57238935 -88350353 + AT_rich Low_complexity Low_complexity 1 21 0 2243 103 10 0 chr10 57238945 57239246 -88350042 - AluSp SINE Alu -9 304 1 2266 102 0 10 chr10 57239246 57239551 -88349737 - AluSx SINE Alu -10 302 1 2551 57 17 0 chr10 57240667 57240967 -88348321 - AluY SINE Alu -6 305 1 1948 138 3 3 chr10 57241573 57241856 -88347432 + AluSx SINE Alu 14 296 -16 1735 169 30 24 chr10 57241877 57242172 -88347116 + AluJb SINE Alu 1 297 -15 375 154 0 0 chr10 57243127 57243192 -88346096 + (CA)n Simple_repeat Simple_repeat 2 66 0 2114 115 0 17 chr10 57243307 57243621 -88345667 - AluSx SINE Alu 0 309 1 1780 158 116 35 chr10 57243621 57244051 -88345237 - L1MC4 LINE L1 -441 7601 7137 418 277 89 30 chr10 57244217 57244419 -88344869 + MIR SINE MIR 48 261 -1 207 280 0 0 chr10 57244585 57244635 -88344653 + CT-rich Low_complexity Low_complexity 3 52 0 341 99 0 62 chr10 57244637 57244718 -88344570 + (TTCC)n Simple_repeat Simple_repeat 1 76 0 2233 107 7 3 chr10 57244750 57245049 -88344239 + AluSp SINE Alu 1 300 -13 246 167 13 154 chr10 57245058 57245095 -88344193 - L2 LINE L2 -45 3268 3246 2173 118 14 0 chr10 57245095 57245384 -88343904 + AluSx SINE Alu 1 293 -19 246 167 13 154 chr10 57245384 57245424 -88343864 - L2 LINE L2 -67 3246 3202 632 115 29 29 chr10 57245424 57245528 -88343760 + AluSq/x SINE Alu 35 138 -175 1694 146 4 11 chr10 57245528 57245788 -88343500 + AluSc SINE Alu 1 258 -51 25 31 0 0 chr10 57245908 57245940 -88343348 + GC_rich Low_complexity Low_complexity 1 32 0 1792 152 10 17 chr10 57246852 57247149 -88342139 + AluJo SINE Alu 1 295 -17 275 214 36 48 chr10 57247287 57247371 -88341917 - L3 LINE CR1 -5 1572 1490 325 229 42 42 chr10 57247707 57247825 -88341463 - FLAM_A SINE Alu -15 118 1 290 305 175 0 chr10 57247941 57248095 -88341193 - MIR SINE MIR -50 212 32 353 320 63 31 chr10 57248234 57248456 -88340832 - MIR SINE MIR 0 262 34 276 215 111 37 chr10 57248851 57248986 -88340302 + L1MC4 LINE L1 7760 7904 -138 2521 81 0 0 chr10 57249108 57249417 -88339871 - AluY SINE Alu -2 309 1 31 58 0 0 chr10 57249629 57249681 -88339607 + AT_rich Low_complexity Low_complexity 1 52 0 260 241 25 25 chr10 57249701 57249780 -88339508 + GA-rich Low_complexity Low_complexity 1 79 0 1581 192 18 3 chr10 57249895 57250181 -88339107 - AluSx SINE Alu -22 290 1 1005 118 0 26 chr10 57250536 57250688 -88338600 - AluSg/x SINE Alu -8 304 157 2263 92 30 0 chr10 57250895 57251190 -88338098 - AluSx SINE Alu -6 306 3 1892 130 3 14 chr10 57251200 57251493 -88337795 - AluSx SINE Alu -22 290 1 425 276 154 0 chr10 57251548 57251704 -88337584 - MLT1K LTR MaLR 0 588 409 252 257 14 71 chr10 57251848 57251918 -88337370 - MLT1K LTR MaLR -415 173 108 232 318 0 0 chr10 57252054 57252117 -88337171 + Charlie1 DNA MER1_type 3 65 -2696 1891 127 13 7 chr10 57252123 57252422 -88336866 - AluSp SINE Alu 0 313 13 410 188 86 31 chr10 57253341 57253469 -88335819 - L2 LINE L2 -1 3271 3137 1794 162 0 20 chr10 57253813 57254115 -88335173 + AluJb SINE Alu 1 296 -16 1965 153 0 0 chr10 57254118 57254400 -88334888 + AluJo SINE Alu 1 282 -30 288 263 25 0 chr10 57254408 57254488 -88334800 - L1ME4a LINE L1 -69 6052 5971 220 263 63 21 chr10 57254493 57254588 -88334700 - MIR SINE MIR -66 142 44 1056 170 13 74 chr10 57255972 57256201 -88333087 - MER20 DNA MER1_type -4 215 1 2020 144 7 3 chr10 57256294 57256593 -88332695 + AluJb SINE Alu 1 300 -12 265 237 43 75 chr10 57257031 57257124 -88332164 + MIR3 SINE MIR 86 175 -33 2696 42 0 6 chr10 57258858 57259169 -88330119 + AluY SINE Alu 1 309 -2 2196 114 0 10 chr10 57259180 57259479 -88329809 + AluSx SINE Alu 1 296 -16 288 236 103 34 chr10 57259493 57259629 -88329659 + L1M2 LINE L1 5327 5467 -694 363 286 11 66 chr10 57259664 57259817 -88329471 + L1ME4a LINE L1 5584 5727 -394 1890 168 13 7 chr10 57259817 57260126 -88329162 + AluJo SINE Alu 1 311 -1 363 286 11 66 chr10 57260126 57260154 -88329134 + L1ME4a LINE L1 5727 5755 -366 507 163 32 41 chr10 57260158 57260281 -88329007 + FLAM_A SINE Alu 1 122 -11 27 29 0 0 chr10 57260283 57260317 -88328971 + AT_rich Low_complexity Low_complexity 1 34 0 276 257 74 107 chr10 57260324 57260471 -88328817 + L1ME4a LINE L1 5762 5912 -209 2305 88 10 0 chr10 57260471 57260765 -88328523 + AluSg SINE Alu 1 297 -13 276 257 74 107 chr10 57260765 57260983 -88328305 + L1ME4a LINE L1 5912 6115 -6 22 35 0 0 chr10 57260983 57261012 -88328276 + AT_rich Low_complexity Low_complexity 1 29 0 712 152 38 38 chr10 57261025 57261157 -88328131 + FLAM_A SINE Alu 2 133 0 1982 128 35 0 chr10 57261199 57261487 -88327801 - AluSx SINE Alu -14 298 1 2213 114 10 3 chr10 57261511 57261819 -88327469 - AluSx SINE Alu -2 310 1 1813 118 0 32 chr10 57261820 57262100 -88327188 - AluSx SINE Alu -8 304 34 322 295 20 29 chr10 57262113 57262372 -88326916 + CT-rich Low_complexity Low_complexity 1 256 0 188 214 18 0 chr10 57262375 57262431 -88326857 + C-rich Low_complexity Low_complexity 2 58 0 225 0 0 0 chr10 57262626 57262651 -88326637 + (A)n Simple_repeat Simple_repeat 1 25 0 197 363 30 15 chr10 57262834 57262969 -88326319 + MIR3 SINE MIR 7 143 -65 4231 124 12 41 chr10 57263878 57263938 -88325350 + L1MB4 LINE L1 5447 5507 -673 966 151 6 78 chr10 57263938 57263974 -88325314 + FRAM SINE Alu 1 38 -264 2156 132 0 0 chr10 57263974 57264270 -88325018 - AluSx SINE Alu -16 296 1 966 151 6 78 chr10 57264270 57264412 -88324876 + FRAM SINE Alu 38 166 0 4231 124 12 41 chr10 57264412 57264750 -88324538 + L1MB4 LINE L1 5507 5817 -363 2367 114 0 0 chr10 57264750 57265057 -88324231 + AluSx SINE Alu 1 307 -5 4231 124 12 41 chr10 57265057 57265382 -88323906 + L1MB4 LINE L1 5817 6150 -30 1614 134 63 16 chr10 57265558 57265811 -88323477 - AluSq SINE Alu -48 265 1 1562 197 30 7 chr10 57266041 57266345 -88322943 + AluJo SINE Alu 1 311 -1 387 145 14 14 chr10 57266377 57266446 -88322842 - LTR16C LTR ERVL -3 488 420 1107 192 16 121 chr10 57266447 57266535 -88322753 - LTR16C LTR ERVL -41 450 354 1843 143 63 3 chr10 57266535 57266822 -88322466 + AluJo SINE Alu 1 304 -8 2051 142 0 0 chr10 57266822 57267117 -88322171 + AluSx SINE Alu 1 295 -17 1107 192 16 121 chr10 57267117 57267408 -88321880 - LTR16C LTR ERVL -135 356 110 396 319 138 0 chr10 57267434 57267594 -88321694 + MER102b DNA MER1_type 160 341 0 1475 179 42 45 chr10 57267725 57268037 -88321251 + AluJb SINE Alu 2 312 0 219 289 62 41 chr10 57268268 57268365 -88320923 + L2 LINE L2 2952 3050 -263 504 276 15 0 chr10 57268808 57268942 -88320346 + L2 LINE L2 3137 3272 0 1451 126 5 0 chr10 57269239 57269438 -88319850 + AluJo SINE Alu 97 296 -16 1462 153 0 0 chr10 57269441 57269663 -88319625 + AluJb SINE Alu 83 304 -8 180 152 0 0 chr10 57269769 57269802 -88319486 + (TTTA)n Simple_repeat Simple_repeat 3 35 0 365 244 30 92 chr10 57269918 57269950 -88319338 - L1ME4a LINE L1 -150 5971 5939 2300 94 0 14 chr10 57269950 57270247 -88319041 - AluSg SINE Alu -17 293 1 365 244 30 92 chr10 57270247 57270331 -88318957 - L1ME4a LINE L1 -182 5939 5865 1897 167 0 23 chr10 57270331 57270637 -88318651 - AluJo SINE Alu -13 299 1 365 244 30 92 chr10 57270637 57270683 -88318605 - L1ME4a LINE L1 -256 5865 5818 786 209 128 107 chr10 57271785 57272167 -88317121 - MLT1B LTR MaLR 0 390 1 1433 278 112 71 chr10 57272221 57274028 -88315260 - L1MC5 LINE L1 -722 7239 5336 2278 98 3 7 chr10 57274042 57274339 -88314949 - AluSx SINE Alu -16 296 1 2154 75 4 11 chr10 57274444 57274722 -88314566 - AluY SINE Alu -3 308 33 365 351 68 28 chr10 57274853 57275101 -88314187 + MIR SINE MIR 5 262 0 229 245 103 26 chr10 57275272 57275582 -88313706 - L1MC5 LINE L1 -58 7903 7570 2541 92 0 3 chr10 57275681 57275987 -88313301 - AluY SINE Alu -6 305 1 1614 99 0 23 chr10 57275987 57276167 -88313121 - AluSg/x SINE Alu 0 312 129 208 51 26 26 chr10 57276167 57276206 -88313082 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2284 91 3 0 chr10 57276206 57276491 -88312797 - AluSp SINE Alu -27 286 1 1614 99 0 23 chr10 57276491 57276530 -88312758 - AluSg/x SINE Alu -181 131 97 536 243 123 78 chr10 57277632 57277916 -88311372 - MER102b DNA MER1_type -1 340 44 808 174 101 0 chr10 57279489 57279638 -88309650 - FRAM SINE Alu -12 164 1 294 113 0 0 chr10 57279795 57279848 -88309440 + AluSp/q SINE Alu 251 303 0 185 250 21 0 chr10 57279848 57279896 -88309392 - MIR SINE MIR -148 114 66 375 313 141 16 chr10 57280481 57280673 -88308615 + MIR SINE MIR 1 216 -46 2700 40 0 0 chr10 57280710 57281010 -88308278 + AluY SINE Alu 1 300 -11 581 170 179 0 chr10 57281013 57281125 -88308163 + AluJo SINE Alu 1 132 -170 419 242 94 11 chr10 57282431 57282734 -88306554 + MER110A LTR ERV1 132 479 -1 22 0 0 0 chr10 57283212 57283234 -88306054 + GC_rich Low_complexity Low_complexity 1 22 0 2229 92 0 7 chr10 57284864 57285173 -88304115 + AluSg SINE Alu 1 307 0 657 202 115 0 chr10 57285173 57285356 -88303932 + MIR SINE MIR 59 262 0 944 181 13 0 chr10 57285357 57285512 -88303776 + AluJo SINE Alu 137 293 -19 21 0 0 0 chr10 57285573 57285594 -88303694 + AT_rich Low_complexity Low_complexity 1 21 0 1694 180 33 6 chr10 57286509 57286871 -88302417 - L1MB8 LINE L1 -5 6173 5802 2076 103 23 0 chr10 57286872 57287134 -88302154 + AluSg SINE Alu 1 268 -42 342 321 18 0 chr10 57288885 57288997 -88300291 + L2 LINE L2 3136 3249 -23 277 162 59 15 chr10 57289668 57289736 -88299552 + MIR SINE MIR 128 198 -64 2483 69 0 3 chr10 57289808 57290111 -88299177 + AluY SINE Alu 1 302 -9 1212 184 120 34 chr10 57290806 57291073 -88298215 + AluSg1 SINE Alu 1 290 -19 260 289 237 0 chr10 57292271 57292368 -88296920 - L2 LINE L2 -7 3265 3146 1200 66 0 0 chr10 57292370 57292506 -88296782 - AluSg SINE Alu -174 136 1 333 236 135 0 chr10 57292516 57292605 -88296683 - MIR SINE MIR -21 241 141 1564 81 0 10 chr10 57292693 57292891 -88296397 + AluSg/x SINE Alu 95 290 -22 264 343 29 0 chr10 57292891 57292993 -88296295 - MIR SINE MIR -153 109 5 470 314 0 28 chr10 57293713 57293911 -88295377 + MIR SINE MIR 18 206 -56 1862 173 17 10 chr10 57293990 57294291 -88294997 - AluJb SINE Alu -8 304 2 2291 92 10 0 chr10 57295175 57295468 -88293820 - AluSx SINE Alu -15 297 2 2805 181 36 42 chr10 57296392 57297160 -88292128 + LTR13 LTR ERVK 192 1007 0 1346 172 23 13 chr10 57297189 57297491 -88291797 - L1MA6 LINE L1 -1 6299 5995 1850 179 174 18 chr10 57297553 57297663 -88291625 + MLT1D LTR MaLR 1 93 -412 2074 113 38 10 chr10 57297663 57297954 -88291334 - AluSx SINE Alu -13 299 1 1850 179 174 18 chr10 57297954 57298280 -88291008 + MLT1D LTR MaLR 93 505 0 1671 189 3 31 chr10 57298503 57298821 -88290467 - AluJo SINE Alu -3 309 1 642 220 0 8 chr10 57298824 57298956 -88290332 - FLAM_A SINE Alu -2 131 1 2240 66 0 11 chr10 57299421 57299694 -88289594 - AluSg SINE Alu -25 285 16 559 324 62 5 chr10 57301958 57302183 -88287105 - MIR SINE MIR -24 238 1 2398 97 0 0 chr10 57303030 57303340 -88285948 - AluSx SINE Alu 0 312 3 414 278 59 59 chr10 57303347 57303534 -88285754 - L1ME4a LINE L1 0 6121 5935 2029 111 56 3 chr10 57303618 57303906 -88285382 - AluSc SINE Alu -6 303 1 1117 156 9 5 chr10 57303914 57304126 -88285162 - L1MD3 LINE L1 -13 7982 7770 2208 121 0 31 chr10 57304151 57304473 -88284815 - AluSx SINE Alu 0 312 1 2240 96 10 7 chr10 57304523 57304825 -88284463 - AluSx SINE Alu -9 303 1 6797 140 88 48 chr10 57305922 57307294 -88281994 - pTR5 LTR ERV1 -143 2295 142 243 0 0 0 chr10 57307483 57307510 -88281778 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 698 147 26 0 chr10 57307510 57307626 -88281662 - FLAM_C SINE Alu -23 120 2 252 361 22 6 chr10 57307630 57307810 -88281478 - L1M4 LINE L1 -747 5399 5217 2194 121 0 3 chr10 57307994 57308291 -88280997 + AluSx SINE Alu 7 302 -10 337 268 105 42 chr10 57308356 57308439 -88280849 + L1ME3A LINE L1 5968 6044 -126 2108 144 0 7 chr10 57308439 57308745 -88280543 - AluJb SINE Alu -8 304 1 337 268 105 42 chr10 57308745 57308851 -88280437 + L1ME3A LINE L1 6044 6169 -1 2379 89 0 0 chr10 57308912 57309203 -88280085 - AluSg SINE Alu -19 291 1 1967 145 0 13 chr10 57309629 57309932 -88279356 + AluJb SINE Alu 1 299 -13 1103 83 0 0 chr10 57311028 57311160 -88278128 - FLAM_C SINE Alu -11 132 1 318 246 14 17 chr10 57311431 57311580 -88277708 + MER5B DNA MER1_type 1 186 -3 899 206 11 6 chr10 57311591 57311766 -88277522 - MER5A DNA MER1_type -1 188 13 2237 105 3 7 chr10 57311785 57312079 -88277209 + AluSx SINE Alu 1 293 -19 2479 86 0 0 chr10 57312474 57312776 -88276512 + AluSg SINE Alu 1 302 -8 195 42 0 0 chr10 57312793 57312817 -88276471 + (TTCA)n Simple_repeat Simple_repeat 3 26 0 675 188 0 0 chr10 57312817 57312934 -88276354 - FLAM_A SINE Alu -16 117 1 260 298 171 31 chr10 57314059 57314415 -88274873 + L2 LINE L2 2866 3271 -1 397 286 129 50 chr10 57314667 57314908 -88274380 - L1M4 LINE L1 -1861 4285 4026 1131 105 7 20 chr10 57315003 57315156 -88274132 + AluSx SINE Alu 1 151 -162 2286 138 0 0 chr10 57315162 57315474 -88273814 + AluSx SINE Alu 1 312 0 2363 110 0 0 chr10 57315499 57315808 -88273480 + AluSg1 SINE Alu 1 309 0 1244 130 6 0 chr10 57315808 57315977 -88273311 + AluSx SINE Alu 130 299 -11 1826 157 4 11 chr10 57315990 57316271 -88273017 + AluSx SINE Alu 1 279 -33 484 164 57 8 chr10 57316392 57316514 -88272774 - L1MB2 LINE L1 -7 6164 6037 375 125 0 11 chr10 57316523 57316591 -88272697 - Alu SINE Alu -251 51 1 2807 148 58 28 chr10 57316591 57317157 -88272131 - L1MB2 LINE L1 -128 6043 5461 1979 137 10 26 chr10 57317828 57318134 -88271154 - AluSx SINE Alu -11 301 1 944 125 29 0 chr10 57318596 57318732 -88270556 - AluSg/x SINE Alu -50 262 123 1273 236 114 20 chr10 57318758 57319160 -88270128 + LTR48B LTR ERV1 1 440 -204 652 177 102 0 chr10 57319168 57319315 -88269973 + LTR49 LTR ERV1 434 595 0 2426 67 0 10 chr10 57319361 57319659 -88269629 + AluY SINE Alu 1 295 -16 2044 146 3 0 chr10 57319818 57320113 -88269175 + AluJb SINE Alu 1 296 -16 1010 106 0 0 chr10 57320127 57320259 -88269029 - FLAM_C SINE Alu -11 132 1 46 0 0 0 chr10 57320262 57320308 -88268980 + AT_rich Low_complexity Low_complexity 1 46 0 303 28 0 0 chr10 57320326 57320362 -88268926 + (CA)n Simple_repeat Simple_repeat 1 36 0 3277 111 13 47 chr10 57320376 57320654 -88268634 - MER4B LTR ERV1 -1 778 492 2147 113 24 3 chr10 57320654 57320947 -88268341 + AluSq SINE Alu 1 299 -14 3277 111 13 47 chr10 57320947 57321299 -88267989 - MER4B LTR ERV1 -287 492 1 204 254 32 0 chr10 57321299 57321362 -88267926 + (CATA)n Simple_repeat Simple_repeat 4 68 0 865 234 67 35 chr10 57322519 57322580 -88266708 + MER46C DNA MER2_type 11 69 -269 2180 138 0 0 chr10 57322580 57322876 -88266412 + AluSx SINE Alu 1 296 -16 865 234 67 35 chr10 57322876 57323126 -88266162 + MER46C DNA MER2_type 69 332 -6 286 280 8 15 chr10 57324514 57324646 -88264642 + G-rich Low_complexity Low_complexity 3 133 0 280 181 0 56 chr10 57324667 57324739 -88264549 - LTR13 LTR ERVK -924 83 16 2051 122 3 11 chr10 57324747 57325033 -88264255 + AluSx SINE Alu 15 298 -14 1486 96 5 14 chr10 57325754 57325963 -88263325 + AluSg/x SINE Alu 86 292 -18 2037 139 3 0 chr10 57326338 57326647 -88262641 + AluSx SINE Alu 1 310 -2 573 274 102 65 chr10 57326916 57327423 -88261865 - L2 LINE L2 -40 3232 2704 199 310 69 9 chr10 57327405 57327521 -88261767 - MIR SINE MIR -2 260 138 * 2133 107 0 3 chr10 57327535 57327843 -88261445 - AluSx SINE Alu 0 312 6 181 152 0 0 chr10 57327888 57327921 -88261367 - MIR SINE MIR -128 134 102 566 150 173 16 chr10 57328055 57328182 -88261106 + MER20 DNA MER1_type 3 149 -70 1835 143 16 32 chr10 57328290 57328604 -88260684 - AluJo SINE Alu -1 311 3 1904 109 71 3 chr10 57329852 57330135 -88259153 + AluSx SINE Alu 1 302 -10 1728 125 37 40 chr10 57330543 57330840 -88258448 + AluSx SINE Alu 1 296 -16 415 230 80 0 chr10 57330852 57330965 -88258323 - MIR3 SINE MIR -29 179 58 364 269 88 25 chr10 57331838 57331998 -88257290 + MIR SINE MIR 49 218 -44 2369 92 0 3 chr10 57332137 57332451 -88256837 + AluSq SINE Alu 1 313 0 1553 180 3 84 chr10 57332577 57332960 -88256328 + MLT1A2 LTR MaLR 5 356 -18 1304 142 9 13 chr10 57333350 57333582 -88255706 + L1MC1 LINE L1 5547 5777 -407 1189 112 8 104 chr10 57333772 57334013 -88255275 + L1MC1 LINE L1 6116 6333 0 337 233 288 34 chr10 57334268 57334414 -88254874 - MER5A DNA MER1_type 0 189 7 333 231 46 37 chr10 57334431 57334539 -88254749 + MIR SINE MIR 27 135 -127 673 248 66 35 chr10 57335558 57335784 -88253504 + MIR SINE MIR 28 260 -2 732 180 8 0 chr10 57335814 57335942 -88253346 + FLAM_A SINE Alu 4 132 -1 214 127 0 73 chr10 57336317 57336372 -88252916 + (GGGTG)n Simple_repeat Simple_repeat 2 52 0 475 287 60 12 chr10 57337766 57337933 -88251355 + MIR SINE MIR 13 187 -75 393 259 71 18 chr10 57337927 57338039 -88251249 + L2 LINE L2 3194 3311 -2 * 242 200 53 40 chr10 57338030 57338105 -88251183 + MIR SINE MIR 187 262 0 * 2134 110 3 10 chr10 57339837 57340145 -88249143 + AluSx SINE Alu 3 308 -4 341 241 59 91 chr10 57341217 57341437 -88247851 + MIR SINE MIR 16 228 -34 1815 158 7 0 chr10 57341629 57341939 -88247349 - AluSx SINE Alu 0 312 1 1332 180 4 19 chr10 57342120 57342381 -88246907 + AluJo SINE Alu 42 298 -14 2115 92 0 3 chr10 57346576 57346879 -88242409 - AluSx SINE Alu 0 312 7 302 258 133 33 chr10 57349541 57349661 -88239627 + MIR SINE MIR 21 152 -110 566 251 36 24 chr10 57349695 57349862 -88239426 + MER5B DNA MER1_type 5 173 -5 922 235 33 5 chr10 57350097 57350310 -88238978 - MIR SINE MIR -11 251 33 2137 120 3 0 chr10 57352497 57352806 -88236482 + AluSx SINE Alu 1 310 -2 1551 160 34 20 chr10 57353026 57353320 -88235968 + AluJo SINE Alu 1 298 -14 264 320 30 54 chr10 57353483 57353686 -88235602 - L2 LINE L2 -216 3056 2859 288 43 0 0 chr10 57353814 57353861 -88235427 + AluSp/q SINE Alu 253 299 -4 2133 99 14 3 chr10 57354113 57354405 -88234883 - AluSx SINE Alu -17 295 1 267 248 9 16 chr10 57354479 57354576 -88234712 + MER5B DNA MER1_type 1 189 0 1889 99 62 0 chr10 57358843 57359116 -88230172 - AluSx SINE Alu -22 290 1 183 182 0 0 chr10 57360080 57360113 -88229175 + MIR SINE MIR 117 149 -113 2072 107 47 7 chr10 57362383 57362683 -88226605 - AluJo SINE Alu 0 312 1 232 239 0 0 chr10 57365152 57365198 -88224090 + GA-rich Low_complexity Low_complexity 1 46 0 647 284 6 16 chr10 57366728 57366911 -88222377 + MER5A DNA MER1_type 8 188 -1 242 337 40 0 chr10 57367201 57367302 -88221986 - L2 LINE L2 -1 3312 3208 237 339 9 43 chr10 57370011 57370126 -88219162 - L3 LINE CR1 -1170 407 297 576 134 0 0 chr10 57370848 57370930 -88218358 + AluJ/FRAM SINE Alu 217 298 -14 434 92 0 0 chr10 57370959 57371024 -88218264 - AluSp/q SINE Alu -11 302 238 901 333 47 33 chr10 57371065 57371636 -88217652 - L2 LINE L2 -737 2577 1999 250 316 107 60 chr10 57371987 57372221 -88217067 + L2 LINE L2 2838 3082 -190 2219 107 0 7 chr10 57372354 57372662 -88216626 + AluSg1 SINE Alu 1 306 -3 818 164 0 8 chr10 57372730 57372864 -88216424 - FLAM_C SINE Alu 0 133 1 1872 143 14 59 chr10 57372909 57373219 -88216069 + L1MB8 LINE L1 5829 6122 -56 778 214 0 0 chr10 57373219 57373350 -88215938 + FLAM_A SINE Alu 1 131 -2 1872 143 14 59 chr10 57373350 57373396 -88215892 + L1MB8 LINE L1 6122 6169 -9 1040 157 6 6 chr10 57373398 57373557 -88215731 - FRAM SINE Alu -7 159 1 2220 81 3 3 chr10 57373968 57374264 -88215024 + AluSg SINE Alu 1 296 -14 2284 82 3 0 chr10 57374269 57374562 -88214726 + AluSc SINE Alu 1 294 -15 779 236 21 5 chr10 57374684 57374875 -88214413 + MIR SINE MIR 28 221 -41 2062 120 0 10 chr10 57374877 57375178 -88214110 + AluSx SINE Alu 1 298 -14 1068 106 0 25 chr10 57375026 57375178 -88214110 + AluSg/x SINE Alu 147 296 -14 2453 71 0 10 chr10 57375178 57375487 -88213801 + AluSg SINE Alu 1 306 -4 644 263 70 41 chr10 57375937 57376014 -88213274 - MIR SINE MIR 0 262 189 1947 121 3 35 chr10 57376014 57376324 -88212964 - AluSx SINE Alu 0 301 1 644 263 70 41 chr10 57376324 57376488 -88212800 - MIR SINE MIR -73 189 13 2015 118 0 4 chr10 57376542 57376814 -88212474 + AluSx SINE Alu 26 296 -16 331 291 43 14 chr10 57376999 57377140 -88212148 + MER5B DNA MER1_type 5 149 -29 2201 81 3 11 chr10 57377459 57377774 -88211514 - AluSx SINE Alu 0 313 1 2129 141 13 0 chr10 57377798 57378104 -88211184 - AluJo SINE Alu -2 310 1 465 311 0 8 chr10 57378185 57378307 -88210981 + MER91A DNA MER1_type 2 122 -74 30 59 0 0 chr10 57378521 57378572 -88210716 + AT_rich Low_complexity Low_complexity 1 51 0 1967 134 3 33 chr10 57379723 57380030 -88209258 - AluSx SINE Alu -13 299 2 465 309 55 36 chr10 57381413 57381578 -88207710 + MER91A DNA MER1_type 1 168 -28 2130 138 3 0 chr10 57383118 57383416 -88205872 - AluSx SINE Alu -13 299 1 2425 56 24 0 chr10 57384979 57385267 -88204021 + AluY SINE Alu 1 295 -16 2397 94 0 7 chr10 57385994 57386303 -88202985 - AluSx SINE Alu -1 311 5 255 171 61 61 chr10 57388652 57388734 -88200554 + MIR SINE MIR 111 192 -70 1906 154 3 3 chr10 57388962 57389268 -88200020 + AluSx SINE Alu 1 306 -6 2310 113 0 0 chr10 57389316 57389618 -88199670 + AluSx SINE Alu 1 302 -10 815 255 114 62 chr10 57389638 57390012 -88199276 - L2 LINE L2 -189 3083 2730 2310 99 0 0 chr10 57390012 57390305 -88198983 + AluSq SINE Alu 3 295 -18 815 255 114 62 chr10 57390305 57390608 -88198680 - L2 LINE L2 -542 2730 2361 801 134 0 30 chr10 57391217 57391351 -88197937 + FLAM_C SINE Alu 1 130 -13 2403 88 0 10 chr10 57391368 57391503 -88197785 + AluSx SINE Alu 1 136 -176 2448 87 0 7 chr10 57391503 57391813 -88197475 + AluSq SINE Alu 1 308 -5 2403 88 0 10 chr10 57391813 57391983 -88197305 + AluSx SINE Alu 136 303 -9 318 26 0 0 chr10 57391983 57392022 -88197266 + (TA)n Simple_repeat Simple_repeat 1 39 0 240 222 0 0 chr10 57392022 57392067 -88197221 + MER81 DNA DNA 70 114 0 255 61 0 0 chr10 57392793 57392826 -88196462 + (CCCTG)n Simple_repeat Simple_repeat 1 33 0 385 279 89 19 chr10 57393350 57393508 -88195780 + MIR SINE MIR 8 176 -86 2481 64 3 0 chr10 57395723 57396018 -88193270 + AluY SINE Alu 2 297 -14 185 182 152 0 chr10 57396872 57396938 -88192350 + MIR SINE MIR 79 154 -108 3512 62 0 7 chr10 57397993 57398444 -88190844 + LTR7 LTR ERV1 1 448 -2 21250 86 60 23 chr10 57398446 57401619 -88187669 + HERVH LTR ERV1 1 3290 -4423 3369 125 0 6 chr10 57401609 57402114 -88187174 + HERVH LTR ERV1 3492 3993 -3720 * 4429 136 6 3 chr10 57402116 57402773 -88186515 + HERVH LTR ERV1 4488 5146 -2567 1396 114 23 18 chr10 57402777 57402996 -88186292 + HERVH LTR ERV1 5600 5819 -1894 * 2588 79 45 13 chr10 57402994 57403374 -88185914 + HERVH LTR ERV1 7322 7713 0 3368 54 16 9 chr10 57403374 57403819 -88185469 + LTR7 LTR ERV1 1 448 -2 21 57 0 0 chr10 57404828 57404863 -88184425 + AT_rich Low_complexity Low_complexity 1 35 0 269 315 20 131 chr10 57404952 57405257 -88184031 - L2 LINE L2 0 3272 3002 2253 61 48 14 chr10 57405568 57405861 -88183427 + AluY SINE Alu 1 303 -8 821 110 102 0 chr10 57406011 57406138 -88183150 - AluSg/x SINE Alu 0 310 171 259 167 0 0 chr10 57406549 57406591 -88182697 + 5S rRNA rRNA 1 42 -79 424 248 105 0 chr10 57406876 57407029 -88182259 - MIR SINE MIR -74 188 20 263 360 96 8 chr10 57407480 57407605 -88181683 - L2 LINE L2 -8 3264 3129 4150 169 17 16 chr10 57408137 57408911 -88180377 + L1MC1 LINE L1 5542 6316 -17 263 332 48 27 chr10 57409171 57409358 -88179930 - L2 LINE L2 -962 2352 2162 7678 27 5 1 chr10 57410008 57410897 -88178391 + L1PA3 LINE L1 5261 6152 -3 207 333 38 87 chr10 57410962 57411145 -88178143 + MER5B DNA MER1_type 3 176 -2 1163 136 19 24 chr10 57412696 57412902 -88176386 - L1PA16 LINE L1 0 6166 5962 2103 113 3 28 chr10 57413266 57413584 -88175704 - AluSx SINE Alu -2 310 1 281 323 77 8 chr10 57413635 57413765 -88175523 - L2 LINE L2 0 3313 3175 288 0 0 0 chr10 57413824 57413856 -88175432 + (TG)n Simple_repeat Simple_repeat 2 33 0 2281 94 37 0 chr10 57414288 57414587 -88174701 - AluSp SINE Alu -2 311 2 228 143 0 0 chr10 57415749 57415791 -88173497 + (TG)n Simple_repeat Simple_repeat 2 43 0 975 242 23 5 chr10 57415870 57416085 -88173203 - MER20 DNA MER1_type 0 219 1 258 56 0 0 chr10 57416389 57416425 -88172863 + (CATA)n Simple_repeat Simple_repeat 1 36 0 22 35 0 0 chr10 57418144 57418173 -88171115 + AT_rich Low_complexity Low_complexity 1 29 0 289 323 11 0 chr10 57420119 57420212 -88169076 + (CATATA)n Simple_repeat Simple_repeat 1 94 0 26 30 0 0 chr10 57420484 57420517 -88168771 + AT_rich Low_complexity Low_complexity 1 33 0 378 91 0 0 chr10 57421237 57421292 -88167996 + (TG)n Simple_repeat Simple_repeat 2 56 0 1503 194 10 10 chr10 57421722 57422021 -88167267 - AluJo SINE Alu -13 299 1 443 357 64 4 chr10 57422163 57422412 -88166876 + L3 LINE CR1 1213 1476 -101 1613 144 44 69 chr10 57422953 57423273 -88166015 + AluSx SINE Alu 1 312 0 845 151 18 18 chr10 57423273 57423545 -88165743 + GA-rich Low_complexity Low_complexity 1 272 0 200 167 0 0 chr10 57423545 57423575 -88165713 + polypurine Low_complexity Low_complexity 1 30 0 26 74 0 0 chr10 57423941 57423995 -88165293 + AT_rich Low_complexity Low_complexity 1 54 0 219 299 0 15 chr10 57424299 57424366 -88164922 - MIR SINE MIR -169 93 28 266 271 31 21 chr10 57424368 57424464 -88164824 + MER103 DNA DNA 62 158 -8 319 331 92 0 chr10 57425135 57425319 -88163969 + MIR SINE MIR 47 247 -15 250 258 0 0 chr10 57425380 57425446 -88163842 + A-rich Low_complexity Low_complexity 1 66 0 552 264 50 0 chr10 57425628 57425787 -88163501 - MER3 DNA MER1_type -30 179 13 186 43 0 0 chr10 57425928 57425951 -88163337 + (TG)n Simple_repeat Simple_repeat 2 24 0 471 144 0 0 chr10 57425968 57426065 -88163223 + (TCTA)n Simple_repeat Simple_repeat 4 100 0 272 381 24 0 chr10 57426352 57426478 -88162810 - MLT1K LTR MaLR -326 262 134 2384 75 0 0 chr10 57427454 57427759 -88161529 - AluY SINE Alu -6 305 1 1480 203 45 28 chr10 57427960 57428319 -88160969 + MLT1A1 LTR MaLR 1 365 0 22 35 0 0 chr10 57428341 57428370 -88160918 + AT_rich Low_complexity Low_complexity 1 29 0 29 0 0 0 chr10 57428631 57428660 -88160628 + AT_rich Low_complexity Low_complexity 1 29 0 24 67 0 0 chr10 57428834 57428879 -88160409 + AT_rich Low_complexity Low_complexity 1 45 0 871 264 103 13 chr10 57428988 57429378 -88159910 + Charlie4a DNA MER1_type 80 504 -4 2695 14 0 0 chr10 57429810 57430106 -88159182 - AluYa5 SINE Alu -3 308 13 212 294 24 59 chr10 57430638 57430723 -88158565 - MIR SINE MIR -93 115 34 282 116 0 0 chr10 57430873 57430916 -88158372 + (TAA)n Simple_repeat Simple_repeat 2 44 0 1617 79 9 0 chr10 57431592 57431820 -88157468 - L1PA7 LINE L1 0 6154 5925 1600 289 98 10 chr10 57431856 57432455 -88156833 + L2 LINE L2 1819 2470 -844 35 63 0 0 chr10 57432696 57432759 -88156529 + AT_rich Low_complexity Low_complexity 1 63 0 220 314 68 68 chr10 57432837 57432955 -88156333 + L2 LINE L2 3184 3301 -12 24 0 0 0 chr10 57432987 57433011 -88156277 + AT_rich Low_complexity Low_complexity 1 24 0 24 0 0 0 chr10 57433526 57433550 -88155738 + AT_rich Low_complexity Low_complexity 1 24 0 228 342 13 0 chr10 57433633 57433709 -88155579 + GA-rich Low_complexity Low_complexity 4 80 0 294 333 12 77 chr10 57433781 57433848 -88155440 - MER5A DNA MER1_type 0 189 119 2167 113 3 0 chr10 57433848 57434149 -88155139 + AluSp SINE Alu 1 302 -11 294 333 12 77 chr10 57434149 57434249 -88155039 - MER5A DNA MER1_type -70 119 33 414 213 82 127 chr10 57435676 57435920 -88153368 + L1ME3A LINE L1 5934 6166 -4 315 0 0 0 chr10 57436799 57436834 -88152454 + (TG)n Simple_repeat Simple_repeat 2 36 0 386 134 15 0 chr10 57436906 57436973 -88152315 - MADE1 DNA Mariner -12 68 1 384 22 0 0 chr10 57438682 57438727 -88150561 + (TG)n Simple_repeat Simple_repeat 2 46 0 1131 204 77 85 chr10 57439665 57440028 -88149260 + MLT1A1 LTR MaLR 1 360 -5 282 125 0 0 chr10 57440032 57440080 -88149208 + (TG)n Simple_repeat Simple_repeat 2 49 0 399 349 75 33 chr10 57441669 57442093 -88147195 - L2 LINE L2 -11 3261 2820 376 271 37 0 chr10 57442526 57442633 -88146655 + MER94 DNA DNA 5 115 -19 243 323 51 116 chr10 57443766 57444042 -88145246 + L2 LINE L2 2924 3181 -91 386 324 99 31 chr10 57444115 57444321 -88144967 + MIR SINE MIR 4 221 -41 268 336 0 33 chr10 57444475 57444597 -88144691 + L2 LINE L2 2928 3045 -227 24 32 0 0 chr10 57445663 57445694 -88143594 + AT_rich Low_complexity Low_complexity 1 31 0 1780 169 3 0 chr10 57445918 57446208 -88143080 - AluSx SINE Alu -21 291 1 197 386 8 31 chr10 57446440 57446567 -88142721 - MIR3 SINE MIR -45 163 40 352 325 81 34 chr10 57446773 57447077 -88142211 + L1MC5 LINE L1 4928 5249 -897 2372 65 3 10 chr10 57447077 57447386 -88141902 + AluY SINE Alu 1 307 -4 352 325 81 34 chr10 57447386 57447404 -88141884 + L1MC5 LINE L1 5249 5265 -881 2176 98 3 7 chr10 57447491 57447788 -88141500 + AluSx SINE Alu 1 296 -16 835 300 143 28 chr10 57447802 57448335 -88140953 + L1MC5 LINE L1 5336 5929 -1879 22 35 0 0 chr10 57448506 57448535 -88140753 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr10 57448547 57448568 -88140720 + AT_rich Low_complexity Low_complexity 1 21 0 1874 231 63 118 chr10 57448857 57449663 -88139625 + L1MC5 LINE L1 6500 7349 -612 712 209 128 107 chr10 57449663 57450045 -88139243 + MLT1B LTR MaLR 1 390 0 1874 231 63 118 chr10 57450045 57450289 -88138999 + L1MC5 LINE L1 7349 7605 -356 2307 62 0 68 chr10 57450289 57450612 -88138676 + AluY SINE Alu 1 301 -10 1874 231 63 118 chr10 57450612 57450626 -88138662 + L1MC5 LINE L1 7605 7618 -343 2355 84 0 10 chr10 57450626 57450934 -88138354 + AluY SINE Alu 1 305 -6 1874 231 63 118 chr10 57450934 57451343 -88137945 + L1MC5 LINE L1 7618 7903 -58 443 339 57 45 chr10 57451517 57451762 -88137526 - MIR SINE MIR -10 252 5 2196 24 0 0 chr10 57451893 57452201 -88137087 + AluY SINE Alu 33 340 0 385 121 0 0 chr10 57452353 57452411 -88136877 + AluY SINE Alu 125 182 -119 22 0 0 0 chr10 57452544 57452566 -88136722 + AT_rich Low_complexity Low_complexity 1 22 0 1386 244 68 53 chr10 57452756 57452915 -88136373 - L1ME1 LINE L1 -96 6070 5915 2029 125 3 7 chr10 57452915 57453220 -88136068 - AluSq SINE Alu -9 304 1 1386 244 68 53 chr10 57453220 57453528 -88135760 - L1ME1 LINE L1 -251 5915 5596 1267 248 69 19 chr10 57453579 57454347 -88134941 - L1ME1 LINE L1 -76 6090 5075 2093 110 27 0 chr10 57454347 57454648 -88134640 + AluSp SINE Alu 1 309 -4 1267 248 69 19 chr10 57454648 57454862 -88134426 - L1ME1 LINE L1 -1091 5075 4873 303 325 83 17 chr10 57456469 57456589 -88132699 + MER5A DNA MER1_type 60 187 -2 292 228 141 0 chr10 57457018 57457110 -88132178 - L1ME2 LINE L1 0 6164 6060 273 281 196 13 chr10 57457119 57457270 -88132018 + Charlie7 DNA MER1_type 88 266 -2346 268 167 0 0 chr10 57457270 57457324 -88131964 - MLT2B2 LTR ERVL 0 520 400 1756 134 21 49 chr10 57457406 57457734 -88131554 - THE1B LTR MaLR 0 364 46 725 154 8 0 chr10 57457735 57457852 -88131436 + AluSq/x SINE Alu 1 118 -195 265 29 29 0 chr10 57457854 57457888 -88131400 - THE1B LTR MaLR -320 35 1 10699 125 6 1 chr10 57457888 57459460 -88129828 - THE1B-int LTR MaLR 0 1580 1 2021 127 47 41 chr10 57459460 57459822 -88129466 - THE1B LTR MaLR 0 364 1 2250 220 27 0 chr10 57459826 57460239 -88129049 - MLT2B2 LTR ERVL -91 424 1 834 304 19 27 chr10 57460239 57460614 -88128674 + Charlie7 DNA MER1_type 262 633 -1979 2072 148 33 19 chr10 57460778 57461137 -88128151 + THE1B LTR MaLR 1 364 0 280 342 43 32 chr10 57461232 57461419 -88127869 + MLT1H1 LTR MaLR 6 194 -361 231 222 0 0 chr10 57461667 57461721 -88127567 + A-rich Low_complexity Low_complexity 1 54 0 5481 183 24 2 chr10 57462420 57463389 -88125899 + MSTA-int LTR MaLR 657 1646 -5 1936 126 155 31 chr10 57463394 57463775 -88125513 + MSTA LTR MaLR 1 428 0 1875 264 105 11 chr10 57463781 57464234 -88125054 - L1M4 LINE L1 -2569 4075 3666 1604 191 3 50 chr10 57464234 57464553 -88124735 - AluJb SINE Alu 0 312 9 1875 264 105 11 chr10 57464553 57464981 -88124307 - L1M4 LINE L1 -2978 3666 3111 834 251 50 5 chr10 57464979 57465178 -88124110 - L1M4 LINE L1 -5802 740 533 * 401 0 0 20 chr10 57465450 57465500 -88123788 + (TG)n Simple_repeat Simple_repeat 2 50 0 233 296 44 37 chr10 57465591 57465726 -88123562 - MIR SINE MIR -6 256 121 865 178 6 6 chr10 57465731 57465888 -88123400 + FRAM SINE Alu 8 164 -12 250 376 18 18 chr10 57465899 57466008 -88123280 - MIR SINE MIR -142 120 12 523 307 105 36 chr10 57466159 57466644 -88122644 + L2 LINE L2 2720 3219 -94 180 324 137 0 chr10 57466779 57466881 -88122407 + L2 LINE L2 2920 3035 -237 33 43 0 0 chr10 57468672 57468719 -88120569 + AT_rich Low_complexity Low_complexity 1 47 0 720 163 144 25 chr10 57468884 57469044 -88120244 - MER58A DNA MER1_type -3 221 43 263 257 18 46 chr10 57469139 57469248 -88120040 + MER103 DNA DNA 12 117 -49 333 0 0 0 chr10 57469995 57470032 -88119256 + (CA)n Simple_repeat Simple_repeat 1 37 0 24 0 0 0 chr10 57470727 57470751 -88118537 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr10 57470947 57470968 -88118320 + AT_rich Low_complexity Low_complexity 1 21 0 2547 52 0 0 chr10 57471938 57472248 -88117040 - AluY SINE Alu -1 310 1 24 0 0 0 chr10 57473195 57473219 -88116069 + AT_rich Low_complexity Low_complexity 1 24 0 564 116 0 0 chr10 57473448 57473534 -88115754 + (TA)n Simple_repeat Simple_repeat 1 86 0 2040 81 7 0 chr10 57474561 57474834 -88114454 + AluY SINE Alu 17 291 -20 230 204 0 37 chr10 57476613 57476667 -88112621 - L1ME LINE L1 -585 5579 5528 638 264 109 60 chr10 57477477 57478480 -88110808 - L1ME3A LINE L1 -5 6165 5123 440 113 0 0 chr10 57479138 57479200 -88110088 + Alu SINE Alu 236 297 -15 237 65 0 0 chr10 57479253 57479284 -88110004 + (TA)n Simple_repeat Simple_repeat 2 32 0 412 270 60 43 chr10 57480374 57480607 -88108681 - L1ME4a LINE L1 -77 6044 5808 1232 204 53 11 chr10 57481240 57481525 -88107763 - AluJb SINE Alu -15 297 1 2345 70 0 29 chr10 57481585 57481900 -88107388 - AluY SINE Alu -5 306 1 194 288 136 15 chr10 57482465 57482597 -88106691 - L3 LINE CR1 -1228 349 202 204 40 0 0 chr10 57482666 57482691 -88106597 + (TTTTTG)n Simple_repeat Simple_repeat 2 26 0 212 307 85 46 chr10 57482913 57483066 -88106222 + MIR SINE MIR 104 262 0 22 80 0 0 chr10 57484151 57484201 -88105087 + AT_rich Low_complexity Low_complexity 1 50 0 222 309 111 0 chr10 57484236 57484317 -88104971 + L2 LINE L2 3223 3312 -1 2681 185 60 13 chr10 57487028 57487562 -88101726 + LTR69 LTR ERVL 22 580 -8 248 281 295 29 chr10 57488098 57488308 -88100980 + L2 LINE L2 3009 3274 -39 392 0 0 20 chr10 57488360 57488409 -88100879 + (TAGA)n Simple_repeat Simple_repeat 3 50 0 22 88 0 0 chr10 57489981 57490038 -88099250 + AT_rich Low_complexity Low_complexity 1 57 0 26 30 0 0 chr10 57490327 57490360 -88098928 + AT_rich Low_complexity Low_complexity 1 33 0 239 86 0 0 chr10 57491613 57491648 -88097640 - Alu SINE Alu -10 290 256 1585 115 3 149 chr10 57491901 57492250 -88097038 - AluSp SINE Alu -5 298 1 202 143 0 24 chr10 57492672 57492714 -88096574 + (TAA)n Simple_repeat Simple_repeat 1 41 0 844 388 5 14 chr10 57493121 57493567 -88095721 + L1PA16 LINE L1 3 444 -6343 337 380 71 40 chr10 57493658 57493884 -88095404 + L1M2 LINE L1 682 914 -5935 465 260 46 6 chr10 57494886 57495059 -88094229 + L1PA16 LINE L1 1362 1541 -5257 1653 186 64 22 chr10 57495061 57495583 -88093705 + MLT2A2 LTR ERVL 1 554 0 11653 248 23 18 chr10 57495583 57497458 -88091830 + L1PA16 LINE L1 1633 3498 -3299 279 54 0 0 chr10 57497458 57497495 -88091793 + (CA)n Simple_repeat Simple_repeat 2 38 0 11653 248 23 18 chr10 57497495 57499778 -88089510 + L1PA16 LINE L1 3498 5826 -971 1051 167 43 5 chr10 57499771 57499981 -88089307 + L1PA16 LINE L1 6333 6550 -267 * 215 283 0 91 chr10 57501601 57501700 -88087588 + L2 LINE L2 3182 3271 -1 416 292 67 48 chr10 57502067 57502276 -88087012 - L2 LINE L2 0 3313 3101 26 30 0 0 chr10 57502468 57502501 -88086787 + AT_rich Low_complexity Low_complexity 1 33 0 1901 138 3 10 chr10 57502525 57502830 -88086458 - AluSx SINE Alu -9 303 1 325 16 47 31 chr10 57503305 57503369 -88085919 + (TA)n Simple_repeat Simple_repeat 1 65 0 386 270 62 67 chr10 57504380 57504927 -88084361 + L1ME LINE L1 2765 3402 -2744 206 282 77 0 chr10 57505088 57505166 -88084122 + L2 LINE L2 2888 2971 -342 2777 120 14 5 chr10 57505181 57505614 -88083674 + L1PA13 LINE L1 5721 6157 -6 521 323 28 28 chr10 57505619 57505870 -88083418 + L2 LINE L2 3041 3291 -22 369 0 0 0 chr10 57505934 57505975 -88083313 + (TG)n Simple_repeat Simple_repeat 2 42 0 439 309 94 12 chr10 57506050 57506464 -88082824 + L1ME LINE L1 3857 4304 -1842 666 292 43 34 chr10 57506568 57506801 -88082487 - MIR SINE MIR -21 241 7 413 310 39 21 chr10 57507248 57507829 -88081459 + L1ME LINE L1 4922 5512 -652 401 297 114 36 chr10 57507849 57508068 -88081220 + L1ME LINE L1 5564 5799 -322 337 272 61 85 chr10 57508334 57508580 -88080708 + MLT1I LTR MaLR 168 407 -2 614 187 30 76 chr10 57508775 57508973 -88080315 + MER53 DNA DNA 1 189 0 628 281 179 15 chr10 57509115 57509389 -88079899 - L2 LINE L2 -782 2532 2214 239 336 68 7 chr10 57509421 57509567 -88079721 - MIR SINE MIR 0 262 108 39 0 0 0 chr10 57512234 57512273 -88077015 + AT_rich Low_complexity Low_complexity 1 39 0 183 246 0 0 chr10 57512307 57512364 -88076924 + (TATATG)n Simple_repeat Simple_repeat 2 58 0 564 242 174 0 chr10 57513469 57513630 -88075658 + MER5A DNA MER1_type 1 189 0 216 122 49 0 chr10 57513632 57513673 -88075615 + GA-rich Low_complexity Low_complexity 2 44 0 183 42 0 0 chr10 57514839 57514863 -88074425 + (CTAG)n Simple_repeat Simple_repeat 1 24 0 1343 206 62 11 chr10 57515157 57515452 -88073836 - AluJo SINE Alu 0 309 1 204 324 14 0 chr10 57516397 57516471 -88072817 - L2 LINE L2 -5 3267 3193 5757 148 45 4 chr10 57516486 57517665 -88071623 + L1MA6 LINE L1 5062 6300 0 1922 116 27 10 chr10 57517946 57518239 -88071049 - AluSx SINE Alu -14 298 1 1964 143 7 0 chr10 57519359 57519645 -88069643 + AluSg SINE Alu 1 288 -22 16179 128 17 23 chr10 57519722 57522346 -88066942 + L1PA6 LINE L1 13 2619 -3527 19204 80 5 0 chr10 57522358 57525789 -88063499 + L1PA6 LINE L1 2704 6149 -5 485 277 32 27 chr10 57526178 57526366 -88062922 + L1MC5 LINE L1 7719 7907 -54 1569 113 80 0 chr10 57526454 57526693 -88062595 + LTR12 LTR ERV1 1 258 -456 278 274 34 17 chr10 57526693 57526810 -88062478 + LTR30 LTR ERV1 524 642 -80 1615 136 6 3 chr10 57526811 57527067 -88062221 + LTR12 LTR ERV1 159 714 0 13939 116 10 12 chr10 57527068 57527180 -88062108 + HERV9 LTR ERV1 58 169 -8230 2718 10 0 3 chr10 57527180 57527487 -88061801 + AluYa5 SINE Alu 1 306 -5 13939 116 10 12 chr10 57527487 57530218 -88059070 + HERV9 LTR ERV1 169 2972 -5427 1445 85 0 0 chr10 57530217 57530406 -88058882 + HERV9 LTR ERV1 4756 4944 -3455 * 2295 145 100 112 chr10 57530407 57531299 -88057989 + Harlequin LTR ERV1 840 1720 -5176 * 4695 101 2 0 chr10 57531294 57531936 -88057352 + Harlequin LTR ERV1 7757 8399 0 1781 70 379 193 chr10 57531936 57532538 -88056750 + LTR12 LTR ERV1 1 714 0 202 222 37 74 chr10 57532544 57532598 -88056690 + MER5B DNA MER1_type 63 114 -64 293 302 55 74 chr10 57532894 57533096 -88056192 - LTR16A LTR ERVL -194 256 59 1259 202 108 12 chr10 57533686 57534018 -88055270 + MLT1A1 LTR MaLR 2 365 0 414 189 42 0 chr10 57534187 57534282 -88055006 + L1MA3 LINE L1 6207 6305 0 258 179 0 0 chr10 57534705 57534761 -88054527 + (TA)n Simple_repeat Simple_repeat 2 57 0 614 305 71 38 chr10 57535679 57536065 -88053223 - L2 LINE L2 -246 3067 2638 304 288 93 0 chr10 57536659 57536798 -88052490 + L1MC/D LINE L1 5698 5849 -1959 425 355 97 39 chr10 57536805 57537407 -88051881 - L2 LINE L2 0 3313 2685 1573 201 102 22 chr10 57537593 57538021 -88051267 - MLT2D LTR ERVL 0 464 1 1065 93 0 0 chr10 57538317 57538468 -88050820 + (TA)n Simple_repeat Simple_repeat 2 152 0 317 309 56 39 chr10 57539240 57539418 -88049870 - MIR SINE MIR 0 262 82 1227 74 0 0 chr10 57539968 57540130 -88049158 - L1PA7 LINE L1 -17 6137 5976 21 0 0 0 chr10 57540561 57540582 -88048706 + AT_rich Low_complexity Low_complexity 1 21 0 378 129 0 0 chr10 57540612 57540674 -88048614 + (CA)n Simple_repeat Simple_repeat 2 63 0 2041 137 10 7 chr10 57540829 57541128 -88048160 + AluSx SINE Alu 1 300 -12 180 0 0 0 chr10 57541595 57541615 -88047673 + (CAAAAA)n Simple_repeat Simple_repeat 2 21 0 33 43 0 0 chr10 57542107 57542154 -88047134 + AT_rich Low_complexity Low_complexity 1 47 0 1565 280 126 6 chr10 57543677 57544195 -88045093 + MLT1G1 LTR MaLR 8 587 -8 23 78 0 0 chr10 57545380 57545431 -88043857 + AT_rich Low_complexity Low_complexity 1 51 0 312 27 0 0 chr10 57545448 57545485 -88043803 + (CA)n Simple_repeat Simple_repeat 2 38 0 21 71 0 0 chr10 57545815 57545857 -88043431 + AT_rich Low_complexity Low_complexity 1 42 0 5499 124 36 11 chr10 57545863 57547168 -88042120 - L1PA14 LINE L1 -15 6146 4828 268 103 15 29 chr10 57547240 57547308 -88041980 + (TTTTTG)n Simple_repeat Simple_repeat 1 67 0 432 37 0 0 chr10 57547847 57547901 -88041387 + (CA)n Simple_repeat Simple_repeat 2 55 0 21 0 0 0 chr10 57548336 57548357 -88040931 + AT_rich Low_complexity Low_complexity 1 21 0 2107 126 10 0 chr10 57548810 57549112 -88040176 + AluSx SINE Alu 1 305 -7 197 286 52 26 chr10 57549156 57549233 -88040055 - MIR SINE MIR -153 109 31 1360 216 61 47 chr10 57549322 57549810 -88039478 + MER67C LTR ERV1 60 508 -6 2188 190 55 2 chr10 57549816 57550290 -88038998 - L1MC3 LINE L1 -159 7626 7128 2077 193 58 14 chr10 57550518 57550982 -88038306 + L1MB5 LINE L1 5668 6147 -27 21 57 0 0 chr10 57550984 57551019 -88038269 + AT_rich Low_complexity Low_complexity 1 35 0 26 0 6 0 chr10 57551860 57551916 -88037372 + AT_rich Low_complexity Low_complexity 1 26 0 21 36 0 0 chr10 57552303 57552331 -88036957 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr10 57552471 57552502 -88036786 + AT_rich Low_complexity Low_complexity 1 31 0 542 255 0 9 chr10 57552502 57552633 -88036655 - FLAM_A SINE Alu 0 142 13 256 240 32 24 chr10 57552703 57552828 -88036460 + (TA)n Simple_repeat Simple_repeat 2 127 0 211 204 0 0 chr10 57553390 57553434 -88035854 + A-rich Low_complexity Low_complexity 4 47 0 28 61 0 0 chr10 57553667 57553716 -88035572 + AT_rich Low_complexity Low_complexity 1 49 0 678 272 0 0 chr10 57553831 57554015 -88035273 + L1P LINE L1 3373 3556 -2590 4933 147 53 2 chr10 57554016 57555159 -88034129 + L1PA16 LINE L1 4976 6164 -2 21 36 0 0 chr10 57555524 57555552 -88033736 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr10 57555743 57555772 -88033516 + AT_rich Low_complexity Low_complexity 1 29 0 1728 170 7 13 chr10 57555798 57556098 -88033190 + AluSx SINE Alu 1 298 -14 1827 165 0 20 chr10 57556785 57557082 -88032206 + AluSx SINE Alu 2 292 -20 971 153 25 0 chr10 57557083 57557240 -88032048 + AluSg/x SINE Alu 136 296 -14 549 241 130 0 chr10 57557364 57557526 -88031762 + MER63A DNA MER1_type 14 196 -14 216 216 0 0 chr10 57557676 57557727 -88031561 + (CATATA)n Simple_repeat Simple_repeat 2 52 0 548 280 92 17 chr10 57557817 57558026 -88031262 - MIR SINE MIR -25 237 19 41 21 0 0 chr10 57558751 57558799 -88030489 + AT_rich Low_complexity Low_complexity 1 48 0 273 186 57 0 chr10 57558846 57558916 -88030372 + (TCTA)n Simple_repeat Simple_repeat 4 77 0 2234 176 37 22 chr10 57559153 57559643 -88029645 - L1MC1 LINE L1 -20 6313 5817 254 317 44 5 chr10 57560095 57560208 -88029080 + MLT1L LTR MaLR 314 528 -87 563 350 0 16 chr10 57560467 57560653 -88028635 - MER5A DNA MER1_type 0 189 7 1834 184 9 9 chr10 57561500 57561848 -88027440 - MER7A DNA MER2_type 0 346 1 276 194 43 43 chr10 57562278 57562371 -88026917 + GA-rich Low_complexity Low_complexity 3 95 0 237 108 0 0 chr10 57562381 57562418 -88026870 + (GA)n Simple_repeat Simple_repeat 1 37 0 182 103 0 51 chr10 57562576 57562615 -88026673 + (TTTC)n Simple_repeat Simple_repeat 1 37 0 21 0 0 0 chr10 57562653 57562674 -88026614 + AT_rich Low_complexity Low_complexity 1 21 0 373 335 60 18 chr10 57563083 57563250 -88026038 + MLT1L LTR MaLR 58 231 -384 548 345 38 4 chr10 57563311 57563546 -88025742 + MLT1L LTR MaLR 339 581 -34 416 83 90 13 chr10 57563552 57563708 -88025580 + (TATAA)n Simple_repeat Simple_repeat 5 172 0 186 71 0 0 chr10 57564247 57564275 -88025013 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 1772 145 11 18 chr10 57564281 57564563 -88024725 - AluSx SINE Alu -32 280 1 24 0 0 0 chr10 57564665 57564689 -88024599 + AT_rich Low_complexity Low_complexity 1 24 0 405 296 107 24 chr10 57564981 57565150 -88024138 - MER5A DNA MER1_type -6 183 1 288 0 0 0 chr10 57566000 57566032 -88023256 + (CA)n Simple_repeat Simple_repeat 2 33 0 966 147 29 53 chr10 57566567 57566737 -88022551 + MER101B LTR ERV1 1 166 -404 1943 144 54 25 chr10 57566737 57567091 -88022197 + THE1B LTR MaLR 1 364 0 10713 121 9 7 chr10 57567091 57568666 -88020622 + THE1B-int LTR MaLR 1 1579 -1 804 144 0 0 chr10 57568667 57568785 -88020503 + THE1B LTR MaLR 1 118 -257 782 93 0 9 chr10 57568776 57568883 -88020405 + THE1B LTR MaLR 259 364 0 * 1700 179 18 89 chr10 57568883 57569323 -88019965 + MER101B LTR ERV1 162 570 0 1371 161 17 17 chr10 57570394 57570624 -88018664 - MER30 DNA MER1_type 0 230 1 775 197 43 53 chr10 57570733 57570921 -88018367 + MER31A-int LTR ERV1 4724 4909 -27 2620 165 10 8 chr10 57570928 57571412 -88017876 + MER31A LTR ERV1 1 485 0 3778 178 21 21 chr10 57571797 57572500 -88016788 - MER50 LTR ERV1 -23 711 9 1660 169 52 27 chr10 57572502 57572868 -88016420 + THE1C LTR MaLR 1 375 0 9106 149 19 35 chr10 57572870 57574475 -88014813 + THE1C-int LTR MaLR 3 1580 0 1434 203 60 14 chr10 57574477 57574827 -88014461 + THE1C LTR MaLR 3 368 -7 1241 62 0 0 chr10 57574964 57575166 -88014122 + L1PA5 LINE L1 5993 6194 0 198 0 0 0 chr10 57576222 57576244 -88013044 + (A)n Simple_repeat Simple_repeat 1 22 0 191 36 36 0 chr10 57576281 57576309 -88012979 + (TA)n Simple_repeat Simple_repeat 2 30 0 187 316 84 21 chr10 57576451 57576546 -88012742 + MIR SINE MIR 122 222 -40 729 47 0 4 chr10 57576954 57577149 -88012139 + AluY SINE Alu 38 311 0 546 228 19 114 chr10 57578908 57579119 -88010169 - MER102b DNA MER1_type 0 341 151 2442 75 0 0 chr10 57579158 57579465 -88009823 - AluY SINE Alu -4 307 1 1929 157 83 0 chr10 57579890 57580297 -88008991 - L1MA8 LINE L1 -4 6287 5847 452 193 0 45 chr10 57582018 57582106 -88007182 + AluJ/FLAM SINE Alu 1 84 -228 212 81 27 0 chr10 57582118 57582141 -88007147 + (TAGA)n Simple_repeat Simple_repeat 2 28 -11 1992 128 7 14 chr10 57582141 57582438 -88006850 + AluSx SINE Alu 3 297 -15 212 81 27 0 chr10 57582438 57582451 -88006837 + (TAGA)n Simple_repeat Simple_repeat 28 39 0 22 35 0 0 chr10 57582744 57582773 -88006515 + AT_rich Low_complexity Low_complexity 1 29 0 26 30 0 0 chr10 57582814 57582847 -88006441 + AT_rich Low_complexity Low_complexity 1 33 0 888 265 85 6 chr10 57584696 57585018 -88004270 - L1ME2 LINE L1 -6 6160 5804 189 292 90 45 chr10 57585182 57585271 -88004017 + L3b LINE CR1 1251 1343 -240 2196 84 3 7 chr10 57585286 57585602 -88003686 - AluSp SINE Alu 0 315 1 234 0 0 0 chr10 57586438 57586464 -88002824 + (A)n Simple_repeat Simple_repeat 1 26 0 215 325 8 34 chr10 57586474 57586591 -88002697 - MIR SINE MIR -43 219 106 958 271 70 32 chr10 57587306 57587708 -88001580 + L1MC4a LINE L1 7145 7561 -247 281 238 0 0 chr10 57587708 57587771 -88001517 + L1MC4 LINE L1 7815 7877 -165 298 174 28 46 chr10 57587793 57587902 -88001386 + (TA)n Simple_repeat Simple_repeat 2 108 0 597 167 16 234 chr10 57587966 57588092 -88001196 + L1MC3 LINE L1 7425 7419 -366 13229 35 7 0 chr10 57588092 57590490 -87998798 + L1PA3 LINE L1 3758 6154 -1 597 167 16 234 chr10 57590490 57590735 -87998553 + L1MC3 LINE L1 7418 7715 -70 23 33 0 0 chr10 57590777 57590807 -87998481 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr10 57590923 57590945 -87998343 + AT_rich Low_complexity Low_complexity 1 22 0 27 0 0 0 chr10 57591240 57591267 -87998021 + AT_rich Low_complexity Low_complexity 1 27 0 2888 172 16 2 chr10 57591314 57591802 -87997486 + LOR1a LTR ERV1 1 495 -2 769 232 164 10 chr10 57592399 57592606 -87996682 + MER8 DNA MER2_type 1 239 0 200 414 10 0 chr10 57592866 57592970 -87996318 - MIR SINE MIR -67 141 37 563 324 24 51 chr10 57593198 57593451 -87995837 + MIR SINE MIR 5 250 -12 21 36 0 0 chr10 57593656 57593684 -87995604 + AT_rich Low_complexity Low_complexity 1 28 0 340 247 169 13 chr10 57594427 57594581 -87994707 - L2 LINE L2 -18 3295 3118 216 291 13 76 chr10 57594696 57594775 -87994513 - MIR SINE MIR -89 173 100 628 309 41 12 chr10 57594837 57595105 -87994183 - L1ME LINE L1 -424 5746 5472 25 0 0 0 chr10 57595121 57595146 -87994142 + AT_rich Low_complexity Low_complexity 1 25 0 226 239 72 90 chr10 57595192 57595251 -87994037 - L1ME LINE L1 -1778 4368 4309 2229 82 17 3 chr10 57595251 57595543 -87993745 + AluSp SINE Alu 4 299 -14 226 239 72 90 chr10 57595543 57595650 -87993638 - L1ME LINE L1 -1837 4309 4205 359 328 43 23 chr10 57595666 57595965 -87993323 - L1ME LINE L1 -3284 2862 2558 1387 241 130 63 chr10 57595972 57596495 -87992793 - MLT1E2 LTR MaLR 0 626 69 388 306 54 14 chr10 57596525 57596672 -87992616 + MIR SINE MIR 96 248 -14 21 0 0 0 chr10 57596678 57596699 -87992589 + AT_rich Low_complexity Low_complexity 1 21 0 212 367 101 0 chr10 57597375 57597484 -87991804 + MIR3 SINE MIR 14 133 -75 2277 52 7 3 chr10 57598824 57599113 -87990175 + L1PA7 LINE L1 5841 6130 -24 333 118 0 0 chr10 57599116 57599167 -87990121 + (TA)n Simple_repeat Simple_repeat 2 52 0 24 53 0 0 chr10 57600204 57600242 -87989046 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr10 57600692 57600714 -87988574 + AT_rich Low_complexity Low_complexity 1 22 0 389 314 148 12 chr10 57601006 57601417 -87987871 - L1ME4a LINE L1 -19 6102 5636 249 308 19 39 chr10 57601420 57601524 -87987764 - MIR SINE MIR -149 113 12 330 272 71 83 chr10 57601583 57601837 -87987451 + L2 LINE L2 3025 3275 -38 398 303 57 8 chr10 57601842 57601964 -87987324 + MIR SINE MIR 32 159 -103 26 0 0 0 chr10 57602042 57602068 -87987220 + AT_rich Low_complexity Low_complexity 1 26 0 710 353 93 23 chr10 57602111 57602672 -87986616 + L3 LINE CR1 399 998 -579 256 293 91 45 chr10 57602754 57602952 -87986336 + L3 LINE CR1 1198 1404 -173 336 154 92 0 chr10 57602954 57603019 -87986269 + L1MA3 LINE L1 6230 6300 -5 21 57 0 0 chr10 57603396 57603431 -87985857 + AT_rich Low_complexity Low_complexity 1 35 0 182 36 0 36 chr10 57606020 57606048 -87983240 + (TAAAAA)n Simple_repeat Simple_repeat 2 28 0 189 147 39 20 chr10 57607084 57607186 -87982102 + (TA)n Simple_repeat Simple_repeat 2 105 0 1905 145 3 3 chr10 57607216 57607512 -87981776 - AluSx SINE Alu -16 296 1 27 73 0 0 chr10 57607635 57607690 -87981598 + AT_rich Low_complexity Low_complexity 1 55 0 24 53 0 0 chr10 57608004 57608042 -87981246 + AT_rich Low_complexity Low_complexity 1 38 0 282 274 75 48 chr10 57608159 57608610 -87980678 + L1ME4a LINE L1 5639 6114 -7 22 0 0 0 chr10 57609184 57609206 -87980082 + AT_rich Low_complexity Low_complexity 1 22 0 1404 200 3 33 chr10 57609245 57609545 -87979743 - AluJo SINE Alu -11 291 1 27 0 0 0 chr10 57610433 57610460 -87978828 + AT_rich Low_complexity Low_complexity 1 27 0 21 57 0 0 chr10 57611391 57611426 -87977862 + AT_rich Low_complexity Low_complexity 1 35 0 274 138 0 31 chr10 57611953 57612018 -87977270 + (TA)n Simple_repeat Simple_repeat 2 64 0 268 206 0 15 chr10 57612023 57612091 -87977197 - LTR66 LTR ERVL -171 439 373 262 218 148 10 chr10 57612908 57613009 -87976279 + L1M4 LINE L1 2305 2419 -3727 221 353 10 20 chr10 57613151 57613253 -87976035 + MIR SINE MIR 11 111 -151 981 253 22 9 chr10 57613995 57614220 -87975068 + MLT1E LTR MaLR 366 593 0 363 60 0 0 chr10 57614932 57614982 -87974306 + (TG)n Simple_repeat Simple_repeat 2 51 0 1779 132 7 51 chr10 57615133 57615451 -87973837 - AluSx SINE Alu 0 305 1 22 35 0 0 chr10 57616437 57616466 -87972822 + AT_rich Low_complexity Low_complexity 1 29 0 829 226 37 0 chr10 57617207 57617417 -87971871 - L1 LINE L1 -1666 4480 4279 387 0 0 0 chr10 57617417 57617460 -87971828 + (TG)n Simple_repeat Simple_repeat 2 44 0 829 226 37 0 chr10 57617460 57617473 -87971815 - L1 LINE L1 -1867 4279 4268 1343 136 17 38 chr10 57617473 57617708 -87971580 + MER30 DNA MER1_type 1 230 0 829 226 37 0 chr10 57617708 57617726 -87971562 - L1 LINE L1 -1878 4268 4229 23 54 0 0 chr10 57617792 57617829 -87971459 + AT_rich Low_complexity Low_complexity 1 37 0 1283 158 45 6 chr10 57617898 57618200 -87971088 + L1MA8 LINE L1 5258 5547 -744 1283 150 53 0 chr10 57618200 57618446 -87970842 + L1MA8 LINE L1 6027 6285 -6 1283 158 45 6 chr10 57618446 57618821 -87970467 + L1MA8 LINE L1 5547 6285 -6 1862 157 42 0 chr10 57618909 57619221 -87970067 + LOR1b LTR ERV1 137 461 0 1095 161 47 5 chr10 57619221 57619432 -87969856 + L1MB3 LINE L1 5918 6137 -46 433 347 30 57 chr10 57619481 57619974 -87969314 - ERVL LTR ERVL -708 5056 4577 571 298 107 10 chr10 57620124 57620329 -87968959 - MIR SINE MIR -6 256 32 218 179 0 0 chr10 57620709 57620748 -87968540 + (CA)n Simple_repeat Simple_repeat 1 39 0 872 234 68 79 chr10 57621738 57622093 -87967195 - MLT1A2 LTR MaLR 0 374 24 232 355 54 0 chr10 57622328 57622494 -87966794 - LTR67 LTR ERVL -2 555 381 1951 170 33 19 chr10 57622502 57622861 -87966427 - THE1B LTR MaLR 0 364 1 21 0 0 0 chr10 57623326 57623347 -87965941 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 57623587 57623608 -87965680 + AT_rich Low_complexity Low_complexity 1 21 0 1989 139 10 0 chr10 57623691 57623994 -87965294 - AluSx SINE Alu -6 306 1 694 244 59 42 chr10 57624396 57624640 -87964648 - L1ME2 LINE L1 -9 6157 5913 * 947 279 97 10 chr10 57624638 57625121 -87964167 - L1ME2 LINE L1 -744 5402 4878 467 242 5 135 chr10 57625182 57625397 -87963891 + MER58C DNA MER1_type 28 214 -1 303 28 0 0 chr10 57625411 57625447 -87963841 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 259 219 16 16 chr10 57625447 57625511 -87963777 - L1ME2 LINE L1 -1390 4756 4693 203 253 13 0 chr10 57626342 57626421 -87962867 + (TA)n Simple_repeat Simple_repeat 2 81 0 1045 128 0 0 chr10 57626866 57627022 -87962266 - AluSc SINE Alu -19 290 135 305 346 39 8 chr10 57627162 57627289 -87961999 + L2 LINE L2 3142 3272 0 185 313 12 25 chr10 57627442 57627522 -87961766 + MER5A DNA MER1_type 1 79 -110 771 139 0 0 chr10 57627858 57627980 -87961308 - L1PB4 LINE L1 -183 5973 5852 580 186 18 0 chr10 57627964 57628077 -87961211 + L1PB4 LINE L1 5951 6065 -91 * 21 98 0 0 chr10 57628090 57628141 -87961147 + GC_rich Low_complexity Low_complexity 1 51 0 49 0 0 0 chr10 57628182 57628231 -87961057 + GC_rich Low_complexity Low_complexity 1 49 0 302 133 0 0 chr10 57628337 57628382 -87960906 - L1P LINE L1 -2214 3932 3888 4709 172 19 19 chr10 57628382 57629272 -87960016 - Tigger1 DNA MER2_type -1528 890 1 1087 260 123 23 chr10 57629274 57629925 -87959363 - L1ME2 LINE L1 -1901 4245 3530 258 239 116 26 chr10 57629958 57630119 -87959169 - L1M4 LINE L1 -1493 4653 4466 218 214 36 0 chr10 57630859 57630915 -87958373 + CT-rich Low_complexity Low_complexity 1 58 0 34 24 0 0 chr10 57632412 57632453 -87956835 + AT_rich Low_complexity Low_complexity 1 41 0 24 53 0 0 chr10 57633524 57633562 -87955726 + AT_rich Low_complexity Low_complexity 1 38 0 21 0 0 0 chr10 57634116 57634137 -87955151 + AT_rich Low_complexity Low_complexity 1 21 0 1588 212 113 48 chr10 57634192 57634669 -87954619 - MER67D LTR ERV1 -5 509 2 3171 127 25 32 chr10 57635215 57635775 -87953513 - MER34B LTR ERV1 -6 559 4 297 118 0 0 chr10 57636032 57636083 -87953205 + (TG)n Simple_repeat Simple_repeat 2 52 0 794 222 83 0 chr10 57636087 57636267 -87953021 - MER6B DNA MER2_type -12 198 4 192 40 0 0 chr10 57636268 57636293 -87952995 + (TG)n Simple_repeat Simple_repeat 2 26 0 8414 63 2 4 chr10 57636366 57637438 -87951850 + MER11C LTR ERVK 2 1071 0 248 157 11 67 chr10 57637649 57637738 -87951550 + CT-rich Low_complexity Low_complexity 1 84 0 2181 126 0 0 chr10 57638804 57639106 -87950182 - AluSx SINE Alu -10 302 1 1817 149 9 22 chr10 57639225 57639540 -87949748 - AluSx SINE Alu -1 311 1 319 301 171 10 chr10 57639875 57640068 -87949220 + LTR33 LTR ERVL 1 224 -297 2039 83 0 11 chr10 57641128 57641405 -87947883 + AluY SINE Alu 1 274 -37 270 0 0 0 chr10 57641409 57641439 -87947849 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 219 283 0 22 chr10 57641784 57641876 -87947412 + GA-rich Low_complexity Low_complexity 3 92 0 1582 149 3 90 chr10 57642365 57642556 -87946732 - AluJb SINE Alu -18 294 141 5929 103 38 0 chr10 57642556 57643454 -87945834 - L1PA8A LINE L1 -13 6118 5213 1582 149 3 90 chr10 57643454 57643583 -87945705 - AluJb SINE Alu -171 141 2 581 275 42 6 chr10 57644301 57644468 -87944820 - FAM SINE Alu -2 173 1 33 25 0 0 chr10 57644742 57644782 -87944506 + AT_rich Low_complexity Low_complexity 1 40 0 27 62 0 0 chr10 57645073 57645121 -87944167 + AT_rich Low_complexity Low_complexity 1 48 0 21 71 0 0 chr10 57645415 57645457 -87943831 + AT_rich Low_complexity Low_complexity 1 42 0 231 167 0 0 chr10 57645614 57645656 -87943632 + (CATATA)n Simple_repeat Simple_repeat 6 47 0 537 346 86 32 chr10 57646704 57647159 -87942129 - L2 LINE L2 -274 3039 2553 24 0 0 0 chr10 57647244 57647268 -87942020 + AT_rich Low_complexity Low_complexity 1 24 0 42 77 0 0 chr10 57647843 57647934 -87941354 + AT_rich Low_complexity Low_complexity 1 91 0 312 237 11 54 chr10 57648060 57648153 -87941135 - L1MC4 LINE L1 -1339 6703 6615 236 111 0 56 chr10 57648199 57648253 -87941035 + LTR66 LTR ERVL 389 439 -171 302 230 11 35 chr10 57648253 57648340 -87940948 - L1MC4 LINE L1 -1343 6699 6615 * 304 263 0 32 chr10 57648266 57648361 -87940927 + L1MC4 LINE L1 6614 6705 -1337 744 273 65 17 chr10 57648603 57648834 -87940454 + MIR SINE MIR 21 262 0 660 243 132 5 chr10 57648901 57649090 -87940198 - MER20 DNA MER1_type -4 215 3 7078 50 7 0 chr10 57650177 57651415 -87937873 + L1PA5 LINE L1 4915 6154 0 1559 188 51 30 chr10 57651527 57651862 -87937426 + MSTC LTR MaLR 1 342 -86 603 150 67 8 chr10 57652493 57652613 -87936675 + Tigger3(Golem) DNA MER2_type 2518 2644 -385 207 0 0 0 chr10 57653427 57653450 -87935838 + (T)n Simple_repeat Simple_repeat 1 23 0 21 0 0 0 chr10 57657541 57657562 -87931726 + AT_rich Low_complexity Low_complexity 1 21 0 414 0 0 0 chr10 57657574 57657620 -87931668 + (TA)n Simple_repeat Simple_repeat 1 46 0 25 51 0 0 chr10 57657625 57657664 -87931624 + AT_rich Low_complexity Low_complexity 1 39 0 203 263 66 13 chr10 57658563 57658639 -87930649 - MIR SINE MIR -8 254 175 22 0 0 0 chr10 57658667 57658689 -87930599 + AT_rich Low_complexity Low_complexity 1 22 0 218 274 55 41 chr10 57659434 57659507 -87929781 - MER91C DNA MER1_type -24 116 43 605 146 18 0 chr10 57661728 57661838 -87927450 - L1MA8 LINE L1 0 6291 6180 1971 179 3 19 chr10 57662366 57662741 -87926547 - L1MA8 LINE L1 -114 6177 5809 472 224 40 85 chr10 57664105 57664328 -87924960 + LTR52 LTR ERVL 1 213 -208 261 271 0 43 chr10 57664614 57664684 -87924604 - MER2 DNA MER2_type -24 321 255 1238 165 8 77 chr10 57664789 57665050 -87924238 - MER2 DNA MER2_type -99 246 4 246 32 0 0 chr10 57665285 57665316 -87923972 + (TA)n Simple_repeat Simple_repeat 1 31 0 922 19 0 0 chr10 57665316 57665421 -87923867 - L1PA5 LINE L1 -15 6139 6035 22 35 0 0 chr10 57665569 57665598 -87923690 + AT_rich Low_complexity Low_complexity 1 29 0 392 289 9 9 chr10 57667010 57667124 -87922164 - L3 LINE CR1 -276 1301 1188 419 136 15 0 chr10 57667604 57667670 -87921618 - U6 snRNA snRNA -37 70 4 1465 199 71 64 chr10 57668043 57668190 -87921098 + MLT1C LTR MaLR 12 157 -310 5283 35 2 0 chr10 57668190 57668823 -87920465 + L1PA4 LINE L1 5520 6153 -2 1465 199 71 64 chr10 57668823 57669128 -87920160 + MLT1C LTR MaLR 157 467 0 341 257 17 17 chr10 57669167 57669346 -87919942 + (TA)n Simple_repeat Simple_repeat 2 180 0 81 21 0 0 chr10 57669567 57669662 -87919626 + AT_rich Low_complexity Low_complexity 1 95 0 2500 123 5 0 chr10 57670023 57670396 -87918892 + THE1C LTR MaLR 1 375 0 8168 151 99 8 chr10 57670398 57671845 -87917443 + THE1C-int LTR MaLR 3 1580 0 2218 148 25 0 chr10 57671845 57672211 -87917077 + THE1C LTR MaLR 1 375 0 22 35 0 0 chr10 57672843 57672872 -87916416 + AT_rich Low_complexity Low_complexity 1 29 0 464 281 45 45 chr10 57673901 57674055 -87915233 + MIR SINE MIR 2 158 -104 2713 196 28 42 chr10 57674055 57674667 -87914621 + MER6A DNA MER2_type 1 603 -2 464 281 45 45 chr10 57674667 57674711 -87914577 + MIR SINE MIR 157 200 -62 285 320 170 0 chr10 57675368 57675468 -87913820 - L2 LINE L2 0 3272 3156 262 344 29 86 chr10 57675535 57676026 -87913262 - L2 LINE L2 -562 2752 2290 267 250 26 69 chr10 57676815 57676931 -87912357 + MIR SINE MIR 87 197 -65 209 59 59 0 chr10 57677621 57677655 -87911633 + T-rich Low_complexity Low_complexity 2 37 0 1837 126 9 62 chr10 57677657 57677982 -87911306 - AluSg SINE Alu 0 310 3 242 353 20 0 chr10 57678542 57678644 -87910644 - MIR SINE MIR -72 136 33 274 371 43 0 chr10 57678804 57678920 -87910368 + L2 LINE L2 3141 3261 -11 220 327 26 65 chr10 57678956 57679109 -87910179 - L2 LINE L2 -208 3064 2918 1075 265 29 40 chr10 57679475 57679920 -87909368 - LTR37B LTR ERV1 -11 457 18 11957 198 54 21 chr10 57680282 57684255 -87905033 - L1MA4A LINE L1 -9 6996 2921 1770 163 14 0 chr10 57684255 57684544 -87904744 - AluSx SINE Alu -13 299 7 11957 198 54 21 chr10 57684544 57684643 -87904645 - L1MA4A LINE L1 -4084 2921 2827 5646 270 39 16 chr10 57684674 57686070 -87903218 - L1MA4A LINE L1 -5421 1428 1 1968 214 28 21 chr10 57686100 57686526 -87902762 - Tigger2a DNA MER2_type -5 429 1 32 26 0 0 chr10 57686778 57686817 -87902471 + AT_rich Low_complexity Low_complexity 1 39 0 244 283 17 0 chr10 57687682 57687742 -87901546 - L2 LINE L2 -4 3309 3249 23 0 0 0 chr10 57687795 57687818 -87901470 + AT_rich Low_complexity Low_complexity 1 23 0 243 263 32 74 chr10 57689451 57689546 -87899742 - MIR SINE MIR -115 147 57 703 171 34 7 chr10 57691049 57691195 -87898093 + MSTC LTR MaLR 279 428 0 2003 160 6 6 chr10 57691874 57692211 -87897077 - MER1B DNA MER1_type 0 337 1 219 259 19 0 chr10 57692568 57692622 -87896666 - MIR SINE MIR -6 256 202 2266 102 3 0 chr10 57692911 57693215 -87896073 - AluSp SINE Alu -8 305 1 305 342 60 69 chr10 57693695 57693984 -87895304 + LTR16A1 LTR ERVL 1 288 -162 545 203 141 6 chr10 57693984 57694147 -87895141 - MER53 DNA DNA -2 187 3 305 342 60 69 chr10 57694147 57694224 -87895064 + LTR16A1 LTR ERVL 288 364 -86 13062 171 44 20 chr10 57694267 57695687 -87893601 + L1MA2 LINE L1 2679 4062 -3661 2123 128 3 0 chr10 57695687 57695992 -87893296 - AluSx SINE Alu -6 306 1 13062 171 44 20 chr10 57695992 57699487 -87889801 + L1MA2 LINE L1 4062 7723 0 4498 149 73 11 chr10 57699488 57700338 -87888950 + Tigger3b DNA MER2_type 329 1231 0 187 411 64 36 chr10 57700782 57701062 -87888226 + L2 LINE L2 2805 3092 -180 2394 84 0 0 chr10 57701331 57701639 -87887649 + AluY SINE Alu 4 311 0 286 85 0 34 chr10 57701639 57701693 -87887595 + (GGAGA)n Simple_repeat Simple_repeat 5 56 0 724 132 16 0 chr10 57701696 57701825 -87887463 + GA-rich Low_complexity Low_complexity 3 133 0 1295 120 21 0 chr10 57702490 57702681 -87886607 - THE1C LTR MaLR -180 195 1 2222 183 38 18 chr10 57702685 57702723 -87886565 + Tigger5 DNA MER2_type 1867 1903 -420 1629 158 121 0 chr10 57702723 57703045 -87886243 + MER46B DNA MER2_type 1 236 0 2222 183 38 18 chr10 57703045 57703454 -87885834 + Tigger5 DNA MER2_type 1903 2323 0 266 315 173 25 chr10 57703727 57703889 -87885399 + MIR SINE MIR 77 262 0 182 250 23 0 chr10 57703983 57704027 -87885261 - MIR SINE MIR -66 142 98 427 307 57 36 chr10 57704069 57704261 -87885027 + MIR SINE MIR 11 206 -56 226 179 45 15 chr10 57704476 57704543 -87884745 + (TA)n Simple_repeat Simple_repeat 1 69 0 2166 67 0 0 chr10 57706040 57706324 -87882964 - L1PA7 LINE L1 -2 6152 5869 180 111 0 0 chr10 57707115 57707142 -87882146 + (TATATG)n Simple_repeat Simple_repeat 2 28 0 248 383 9 17 chr10 57707661 57707776 -87881512 + MER5B DNA MER1_type 64 177 -1 360 0 0 0 chr10 57708511 57708581 -87880707 + (CA)n Simple_repeat Simple_repeat 1 110 0 360 0 0 0 chr10 57708581 57708621 -87880667 + (CA)n Simple_repeat Simple_repeat 1 40 0 260 365 17 26 chr10 57709206 57709321 -87879967 - L2 LINE L2 -3 3269 3156 276 395 8 8 chr10 57709393 57709527 -87879761 - L2 LINE L2 -361 2952 2819 324 292 36 36 chr10 57709531 57709668 -87879620 - MIR SINE MIR -2 260 124 207 204 0 0 chr10 57709783 57709827 -87879461 + GA-rich Low_complexity Low_complexity 2 45 0 24 85 0 0 chr10 57710033 57710092 -87879196 + AT_rich Low_complexity Low_complexity 1 59 0 3331 55 9 0 chr10 57710599 57711021 -87878267 - L1PA7 LINE L1 0 6154 5729 1781 155 25 4 chr10 57711021 57711298 -87877990 - AluSx SINE Alu -29 283 1 3227 166 15 5 chr10 57711378 57711974 -87877314 - L1PA16 LINE L1 0 6166 5565 5322 254 18 16 chr10 57711990 57712724 -87876564 - L1PA13 LINE L1 -2975 3822 3091 2294 101 146 8 chr10 57712724 57713100 -87876188 + MSTA LTR MaLR 1 428 0 5322 254 18 16 chr10 57713100 57714852 -87874436 - L1PA13 LINE L1 -3706 3091 1322 261 246 63 48 chr10 57714960 57715086 -87874202 + L1MC5 LINE L1 7797 7924 -37 306 309 119 25 chr10 57715249 57715500 -87873788 - MLT1L LTR MaLR -35 522 227 277 291 82 45 chr10 57716344 57716478 -87872810 - MIR SINE MIR -2 260 122 2357 212 71 44 chr10 57717049 57717594 -87871694 - MER92B LTR ERV1 -1 635 70 5022 38 2 3 chr10 57717594 57718206 -87871082 - L1PA3 LINE L1 0 6155 5545 2357 212 71 44 chr10 57718206 57718278 -87871010 - MER92B LTR ERV1 -566 70 1 1620 143 18 21 chr10 57718554 57718671 -87870617 - Tigger7 DNA MER2_type 0 2487 2371 2182 119 54 25 chr10 57718671 57719025 -87870263 + THE1B LTR MaLR 1 364 0 1620 143 18 21 chr10 57719025 57719187 -87870101 - Tigger7 DNA MER2_type -116 2371 2209 861 232 18 0 chr10 57719191 57719359 -87869929 - Tigger7 DNA MER2_type -562 171 1 201 154 0 0 chr10 57720498 57720537 -87868751 + T-rich Low_complexity Low_complexity 1 39 0 243 335 136 13 chr10 57721102 57721257 -87868031 - MER5B DNA MER1_type 0 178 5 39 0 0 0 chr10 57721305 57721344 -87867944 + AT_rich Low_complexity Low_complexity 1 39 0 2294 81 0 0 chr10 57721350 57721677 -87867611 - AluY SINE Alu 0 327 1 243 0 0 0 chr10 57721973 57722000 -87867288 + (CAAG)n Simple_repeat Simple_repeat 1 27 0 182 91 30 0 chr10 57722223 57722256 -87867032 + (TATG)n Simple_repeat Simple_repeat 2 35 0 30 0 0 0 chr10 57723758 57723788 -87865500 + AT_rich Low_complexity Low_complexity 1 30 0 1798 197 5 3 chr10 57724342 57724713 -87864575 - L1PB4 LINE L1 -2 6154 5783 449 358 60 29 chr10 57724827 57725207 -87864081 - MLT1J LTR MaLR -84 427 36 289 98 0 49 chr10 57725239 57725300 -87863988 + (GAAA)n Simple_repeat Simple_repeat 2 59 0 214 326 206 0 chr10 57727875 57728050 -87861238 + MIR SINE MIR 6 216 -46 23 0 0 0 chr10 57728457 57728480 -87860808 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr10 57728668 57728689 -87860599 + AT_rich Low_complexity Low_complexity 1 21 0 309 288 18 88 chr10 57729124 57729294 -87859994 - HAL1 LINE L1 -2109 398 241 23 54 0 0 chr10 57730015 57730052 -87859236 + AT_rich Low_complexity Low_complexity 1 37 0 256 241 143 9 chr10 57730099 57730211 -87859077 - L1ME4a LINE L1 -21 6100 5974 22 56 0 0 chr10 57730490 57730526 -87858762 + AT_rich Low_complexity Low_complexity 1 36 0 224 196 22 0 chr10 57730791 57730837 -87858451 - MIR3 SINE MIR -1 207 161 194 91 30 0 chr10 57732811 57732844 -87856444 + CT-rich Low_complexity Low_complexity 2 35 0 27 29 0 0 chr10 57733818 57733852 -87855436 + AT_rich Low_complexity Low_complexity 1 34 0 1529 160 71 34 chr10 57733963 57734257 -87855031 + AluSx SINE Alu 1 305 -7 299 329 51 112 chr10 57734265 57734621 -87854667 - L2 LINE L2 -1 3271 2938 459 238 42 28 chr10 57735236 57735379 -87853909 + MER112 DNA MER1_type 6 150 -110 43272 40 1 14 chr10 57736071 57742311 -87846977 - L1PA4 LINE L1 0 6155 1 296 291 82 18 chr10 57743417 57743527 -87845761 + L2 LINE L2 3196 3312 -1 1022 148 0 0 chr10 57743870 57744055 -87845233 + AluSg/x SINE Alu 134 318 0 28 0 0 0 chr10 57744246 57744274 -87845014 + AT_rich Low_complexity Low_complexity 1 28 0 387 0 0 0 chr10 57744894 57744937 -87844351 + (CA)n Simple_repeat Simple_repeat 2 44 0 273 301 11 11 chr10 57745854 57745947 -87843341 - MLT2E LTR ERVL -328 300 208 269 341 36 30 chr10 57746161 57746328 -87842960 - ERVL LTR ERVL -2 5762 5595 863 306 48 3 chr10 57746501 57746792 -87842496 - ERVL LTR ERVL -341 5423 5120 541 306 71 21 chr10 57746813 57747094 -87842194 - ERVL LTR ERVL -1706 4058 3764 290 184 0 66 chr10 57747174 57747250 -87842038 + Tigger5 DNA MER2_type 1234 1304 -1019 1681 181 0 23 chr10 57750337 57750636 -87838652 - AluSx SINE Alu -10 302 11 25 31 0 0 chr10 57752895 57752927 -87836361 + AT_rich Low_complexity Low_complexity 1 32 0 195 280 119 84 chr10 57754228 57754371 -87834917 + L2 LINE L2 2596 2743 -571 183 369 73 62 chr10 57755151 57755411 -87833877 + L2 LINE L2 2967 3229 -43 274 358 63 78 chr10 57756610 57757264 -87832024 + L2 LINE L2 2218 2861 -453 259 339 42 0 chr10 57757364 57757482 -87831806 + L2 LINE L2 3184 3306 -7 3085 170 39 14 chr10 57757594 57758158 -87831130 + MER6A DNA MER2_type 1 578 -27 326 296 93 41 chr10 57758318 57758490 -87830798 + MIR SINE MIR 47 227 -35 23 54 0 0 chr10 57759701 57759738 -87829550 + AT_rich Low_complexity Low_complexity 1 37 0 2509 68 0 0 chr10 57759824 57760132 -87829156 + AluY SINE Alu 1 308 -3 441 268 21 42 chr10 57760508 57760650 -87828638 + MIR SINE MIR 5 143 -119 1448 225 9 9 chr10 57760880 57760892 -87828396 + L1 LINE L1 3559 3570 -2576 2618 182 20 25 chr10 57760892 57761384 -87827904 - L1PA16 LINE L1 -9 6157 5667 2397 59 7 3 chr10 57761384 57761691 -87827597 - AluY SINE Alu -3 308 1 2618 182 20 25 chr10 57761691 57761748 -87827540 - L1PA16 LINE L1 -499 5667 5611 1448 225 9 9 chr10 57761748 57762069 -87827219 + L1 LINE L1 3569 3892 -2254 * 2618 183 36 4 chr10 57762067 57762954 -87826334 - L1PA16 LINE L1 -564 5602 4685 966 210 129 13 chr10 57762959 57763281 -87826007 + MSTA LTR MaLR 6 364 0 1078 212 27 4 chr10 57763281 57763540 -87825748 - L1 LINE L1 -1457 4689 4425 7205 245 22 28 chr10 57763548 57765735 -87823553 + L1 LINE L1 2161 4334 -1812 3471 120 83 84 chr10 57767132 57767917 -87821371 + LTR1 LTR ERV1 1 784 -1 2255 193 24 4 chr10 57768011 57768463 -87820825 + MER65C LTR ERV1 1 461 0 23 0 10 0 chr10 57769834 57769900 -87819388 + AT_rich Low_complexity Low_complexity 1 23 0 277 105 0 35 chr10 57769927 57769984 -87819304 + (GGAA)n Simple_repeat Simple_repeat 3 57 0 608 298 82 31 chr10 57771890 57772437 -87816851 - L1ME3A LINE L1 -223 5947 5373 493 40 0 26 chr10 57772444 57772520 -87816768 + AluY SINE Alu 238 311 -1 290 143 44 0 chr10 57772523 57772614 -87816674 + (TA)n Simple_repeat Simple_repeat 1 95 0 381 123 65 13 chr10 57772921 57773075 -87816213 + (TA)n Simple_repeat Simple_repeat 1 162 0 23 0 0 0 chr10 57773498 57773521 -87815767 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr10 57773561 57773582 -87815706 + AT_rich Low_complexity Low_complexity 1 21 0 536 277 67 67 chr10 57773630 57774345 -87814943 - L1 LINE L1 -3072 3074 2360 207 0 0 0 chr10 57774576 57774599 -87814689 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 28 0 0 0 chr10 57774786 57774814 -87814474 + AT_rich Low_complexity Low_complexity 1 28 0 216 67 0 0 chr10 57774866 57774896 -87814392 + (TG)n Simple_repeat Simple_repeat 2 31 0 1786 174 3 0 chr10 57775260 57775565 -87813723 + AluSx SINE Alu 1 306 -6 603 318 56 28 chr10 57776863 57777115 -87812173 + MIR SINE MIR 2 260 -2 729 315 59 11 chr10 57777303 57777589 -87811699 + MER110 LTR ERV1 167 466 -25 332 313 0 0 chr10 57779196 57779292 -87809996 + MER110-int LTR ERV1 1726 1821 -4980 2278 89 0 22 chr10 57779836 57780151 -87809137 + AluSg SINE Alu 1 308 -2 633 357 56 26 chr10 57780385 57780884 -87808404 + MER110-int LTR ERV1 151 664 -3983 335 91 18 0 chr10 57781056 57781111 -87808177 - MER41A LTR ERV1 -89 465 410 386 282 8 35 chr10 57781329 57781501 -87807787 + MER110-int LTR ERV1 969 3268 -3533 264 336 25 34 chr10 57781579 57781698 -87807590 + MER110-int LTR ERV1 3680 3797 -850 199 390 12 0 chr10 57781698 57781780 -87807508 - L3 LINE CR1 -517 1060 978 258 271 127 72 chr10 57782298 57782415 -87806873 + MER110-int LTR ERV1 4443 4575 -72 189 0 0 0 chr10 57782415 57782436 -87806852 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 258 271 127 72 chr10 57782436 57782499 -87806789 + MER110-int LTR ERV1 4575 4633 -14 496 291 53 93 chr10 57782679 57783007 -87806281 + MER110 LTR ERV1 132 435 -33 216 286 29 0 chr10 57783566 57783636 -87805652 + MIR SINE MIR 176 247 -15 264 59 0 0 chr10 57784237 57784271 -87805017 + (A)n Simple_repeat Simple_repeat 1 34 0 336 354 106 16 chr10 57784778 57785032 -87804256 - L1MC/D LINE L1 -2014 5794 5518 192 97 0 0 chr10 57786220 57786251 -87803037 + (TTA)n Simple_repeat Simple_repeat 1 31 0 869 112 0 0 chr10 57786251 57786367 -87802921 - AluY SINE Alu -194 117 2 2135 142 0 0 chr10 57786367 57786677 -87802611 - AluSx SINE Alu -2 310 1 276 176 24 47 chr10 57786987 57787072 -87802216 + (CATATA)n Simple_repeat Simple_repeat 2 84 0 500 275 18 6 chr10 57789968 57790135 -87799153 + L1ME2 LINE L1 5987 6155 -9 2131 120 3 0 chr10 57790189 57790481 -87798807 + AluSp SINE Alu 1 293 -20 5455 191 19 5 chr10 57790578 57791804 -87797484 - L1MC1 LINE L1 -23 6310 5066 528 286 120 53 chr10 57792514 57792815 -87796473 + L2 LINE L2 2852 3172 -141 584 251 84 21 chr10 57792892 57793131 -87796157 - L1ME2 LINE L1 -9 6155 5902 26 0 0 0 chr10 57793403 57793429 -87795859 + AT_rich Low_complexity Low_complexity 1 26 0 285 51 0 0 chr10 57794426 57794465 -87794823 + (TG)n Simple_repeat Simple_repeat 1 39 0 273 143 0 0 chr10 57794556 57794598 -87794690 - MER96B DNA MER1_type? -183 234 193 504 212 26 83 chr10 57794873 57795036 -87794252 + MER96B DNA MER1_type? 236 388 -29 1881 115 6 51 chr10 57795036 57795350 -87793938 - AluSg SINE Alu -10 300 1 504 212 26 83 chr10 57795350 57795379 -87793909 + MER96B DNA MER1_type? 388 417 0 274 361 96 13 chr10 57795379 57795609 -87793679 - L2 LINE L2 -2497 817 569 216 0 0 0 chr10 57795718 57795742 -87793546 + (A)n Simple_repeat Simple_repeat 1 24 0 293 345 90 6 chr10 57796316 57796493 -87792795 + MIR SINE MIR 8 199 -63 23 0 0 0 chr10 57796552 57796575 -87792713 + AT_rich Low_complexity Low_complexity 1 23 0 197 206 0 0 chr10 57796600 57796634 -87792654 - L2 LINE L2 -13 3300 3267 184 330 60 10 chr10 57797297 57797397 -87791891 + MIR SINE MIR 64 168 -94 5004 28 0 0 chr10 57798272 57798875 -87790413 - L1P LINE L1 -856 5290 4688 7081 22 0 0 chr10 57798875 57799695 -87789593 + L1PA2 LINE L1 5330 6153 -2 234 0 0 0 chr10 57800426 57800452 -87788836 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 321 145 0 0 chr10 57800492 57800554 -87788734 + (TCTA)n Simple_repeat Simple_repeat 4 65 0 2149 82 7 36 chr10 57801471 57801775 -87787513 - AluSc SINE Alu -14 295 1 465 19 0 0 chr10 57802226 57802280 -87787008 + (TAAA)n Simple_repeat Simple_repeat 1 54 0 31 26 0 0 chr10 57802754 57802792 -87786496 + AT_rich Low_complexity Low_complexity 1 38 0 11212 258 36 14 chr10 57803153 57806717 -87782571 + L1P LINE L1 1754 5396 -750 1226 186 112 11 chr10 57807014 57807283 -87782005 + AluJo SINE Alu 1 296 -16 1271 190 14 68 chr10 57808502 57808781 -87780507 + AluJo SINE Alu 15 278 -34 21 0 0 0 chr10 57809998 57810019 -87779269 + AT_rich Low_complexity Low_complexity 1 21 0 355 256 157 25 chr10 57810665 57810786 -87778502 - L2 LINE L2 -1 3312 3176 192 390 61 0 chr10 57810915 57810997 -87778291 - MIR SINE MIR -69 139 53 364 182 39 0 chr10 57811030 57811107 -87778181 + Tigger6a DNA MER2_type 1 80 -1003 465 147 0 0 chr10 57811107 57811175 -87778113 - AluJ/FLAM SINE Alu -242 70 3 3056 165 62 158 chr10 57811408 57812503 -87776785 + Tigger6a DNA MER2_type 90 1079 -4 1557 205 14 0 chr10 57812958 57813255 -87776033 - AluJb SINE Alu -9 303 3 803 304 68 86 chr10 57813554 57814041 -87775247 + L2 LINE L2 2810 3287 -26 1528 97 19 0 chr10 57814072 57814279 -87775009 - AluY SINE Alu -100 211 1 248 361 19 9 chr10 57814576 57814684 -87774604 - MIR SINE MIR -88 174 66 210 276 0 17 chr10 57815108 57815166 -87774122 + MIR SINE MIR 156 212 -50 202 150 25 0 chr10 57815212 57815252 -87774036 + (CAAA)n Simple_repeat Simple_repeat 4 44 0 1487 257 34 36 chr10 57815513 57816019 -87773269 + MLT1D LTR MaLR 1 505 0 278 113 0 38 chr10 57816687 57816740 -87772548 + (TTCC)n Simple_repeat Simple_repeat 4 54 0 820 109 29 0 chr10 57816754 57816892 -87772396 - L1MA9 LINE L1 0 6312 6171 1761 196 45 10 chr10 57816948 57817352 -87771936 - L1M2 LINE L1 -525 5787 5370 3497 199 38 13 chr10 57817465 57818300 -87770988 - L1M2 LINE L1 -839 5307 4452 14290 215 28 14 chr10 57818310 57820180 -87769108 + L1PA13 LINE L1 1 1844 -4953 212 0 36 0 chr10 57820180 57820208 -87769080 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 14290 215 28 14 chr10 57820208 57821987 -87767301 + L1PA13 LINE L1 1844 3597 -3200 212 59 29 0 chr10 57821987 57822021 -87767267 + (CAA)n Simple_repeat Simple_repeat 2 36 0 14290 215 28 14 chr10 57822021 57823741 -87765547 + L1PA13 LINE L1 3597 5443 -1354 23 0 0 0 chr10 57823881 57823904 -87765384 + AT_rich Low_complexity Low_complexity 1 23 0 2126 103 7 10 chr10 57824479 57824779 -87764509 + AluSq SINE Alu 1 299 -14 21 0 0 0 chr10 57824879 57824900 -87764388 + AT_rich Low_complexity Low_complexity 1 21 0 186 303 30 15 chr10 57825155 57825221 -87764067 - L2 LINE L2 0 3313 3247 1625 197 29 23 chr10 57825299 57825698 -87763590 - MLT1A1 LTR MaLR 0 374 1 198 296 106 85 chr10 57825850 57826049 -87763239 - L2 LINE L2 -569 2745 2543 236 154 19 0 chr10 57826096 57826148 -87763140 + (TG)n Simple_repeat Simple_repeat 1 53 0 30 0 0 0 chr10 57826562 57826592 -87762696 + AT_rich Low_complexity Low_complexity 1 30 0 2033 128 3 0 chr10 57826594 57826882 -87762406 - AluSx SINE Alu -23 289 1 951 174 17 0 chr10 57827592 57827764 -87761524 - FAM SINE Alu 0 175 1 2540 134 2 10 chr10 57828679 57829075 -87760213 - L1PB3 LINE L1 -176 5978 5586 22 0 0 0 chr10 57829075 57829097 -87760191 + AT_rich Low_complexity Low_complexity 1 22 0 229 347 0 0 chr10 57829636 57829711 -87759577 + MIR3 SINE MIR 88 162 -46 1266 264 54 46 chr10 57829926 57830426 -87758862 + MLT1D LTR MaLR 1 504 -1 21 82 0 0 chr10 57830890 57830939 -87758349 + AT_rich Low_complexity Low_complexity 1 49 0 396 179 154 0 chr10 57831255 57831333 -87757955 + MER68 LTR ERV1 1 90 -472 396 288 110 47 chr10 57831733 57831924 -87757364 + MLT1I LTR MaLR 6 208 -201 250 291 39 19 chr10 57831989 57832092 -87757196 + MLT1I LTR MaLR 305 409 0 288 0 0 0 chr10 57832509 57832541 -87756747 + (TTTA)n Simple_repeat Simple_repeat 4 35 0 22 56 0 0 chr10 57835063 57835099 -87754189 + AT_rich Low_complexity Low_complexity 1 36 0 461 216 9 9 chr10 57835109 57835228 -87754060 - L1MD3 LINE L1 -1 7994 7665 5034 175 32 20 chr10 57835262 57835687 -87753601 - L1PA16 LINE L1 -1 6165 5747 2022 133 29 35 chr10 57835687 57836064 -87753224 + THE1C LTR MaLR 1 375 0 5034 175 32 20 chr10 57836064 57836292 -87752996 - L1PA16 LINE L1 -419 5747 5523 1834 171 103 25 chr10 57836292 57836689 -87752599 - MSTA LTR MaLR 0 428 1 5034 175 32 20 chr10 57836689 57837576 -87751712 - L1PA16 LINE L1 -643 5523 4603 3185 240 17 0 chr10 57837577 57838359 -87750929 - L1 LINE L1 -1613 4533 3739 190 300 67 25 chr10 57839646 57839766 -87749522 + MIR SINE MIR 138 262 0 469 173 25 0 chr10 57839776 57839856 -87749432 + MER31B LTR ERV1 1 82 -384 704 236 37 21 chr10 57839856 57840047 -87749241 + MER67B LTR ERV1 1 194 -467 2261 125 19 27 chr10 57840049 57840416 -87748872 - THE1B LTR MaLR 0 364 1 11001 107 18 1 chr10 57840421 57841960 -87747328 - THE1B-int LTR MaLR -14 1566 1 2198 120 22 33 chr10 57841960 57842328 -87746960 - THE1B LTR MaLR 0 364 1 1451 248 79 22 chr10 57842329 57842612 -87746676 + MER67D LTR ERV1 60 323 -143 3239 146 23 11 chr10 57842612 57843132 -87746156 - MER1A DNA MER1_type 0 527 2 1451 248 79 22 chr10 57843132 57843282 -87746006 + MER67D LTR ERV1 323 463 -3 22 0 0 0 chr10 57843489 57843511 -87745777 + AT_rich Low_complexity Low_complexity 1 22 0 211 300 57 0 chr10 57844207 57844277 -87745011 - MIR SINE MIR -40 222 149 22 88 0 0 chr10 57844292 57844349 -87744939 + AT_rich Low_complexity Low_complexity 1 57 0 31 0 0 0 chr10 57844929 57844960 -87744328 + AT_rich Low_complexity Low_complexity 1 31 0 623 11 81 46 chr10 57844960 57845134 -87744154 + (TA)n Simple_repeat Simple_repeat 1 180 0 21 36 0 0 chr10 57846613 57846641 -87742647 + AT_rich Low_complexity Low_complexity 1 28 0 997 227 123 23 chr10 57847515 57847823 -87741465 - MER58B DNA MER1_type -2 339 1 1621 122 75 54 chr10 57849760 57850054 -87739234 - AluSg1 SINE Alu -9 300 1 867 98 16 0 chr10 57850509 57850632 -87738656 + AluSq/x SINE Alu 1 125 -187 188 0 0 69 chr10 57850640 57850669 -87738619 + (TAAAAA)n Simple_repeat Simple_repeat 4 30 0 200 302 16 32 chr10 57850922 57850985 -87738303 + MER5A DNA MER1_type 36 97 -92 378 262 64 86 chr10 57851046 57851233 -87738055 - MER5A DNA MER1_type 0 189 7 264 255 242 19 chr10 57851259 57851416 -87737872 - L3b LINE CR1 -85 1498 1307 21 36 0 0 chr10 57851551 57851579 -87737709 + AT_rich Low_complexity Low_complexity 1 28 0 207 280 27 107 chr10 57852027 57852177 -87737111 + L2 LINE L2 3166 3303 -10 348 111 0 0 chr10 57854156 57854210 -87735078 + (TG)n Simple_repeat Simple_repeat 1 54 0 33 25 0 0 chr10 57854796 57854836 -87734452 + AT_rich Low_complexity Low_complexity 1 40 0 21 0 0 0 chr10 57855390 57855411 -87733877 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 57856407 57856428 -87732860 + AT_rich Low_complexity Low_complexity 1 21 0 207 180 0 40 chr10 57856740 57856790 -87732498 + A-rich Low_complexity Low_complexity 3 50 0 25 0 0 0 chr10 57856978 57857003 -87732285 + AT_rich Low_complexity Low_complexity 1 25 0 585 276 45 20 chr10 57857171 57857370 -87731918 + MIR SINE MIR 26 229 -33 1349 227 13 13 chr10 57859068 57859376 -87729912 - AluJo SINE Alu -1 311 4 741 178 0 15 chr10 57859383 57859518 -87729770 - FLAM_C SINE Alu 0 133 1 417 175 0 0 chr10 57859747 57859827 -87729461 + MADE1 DNA Mariner 1 80 0 33 43 0 0 chr10 57859968 57860015 -87729273 + AT_rich Low_complexity Low_complexity 1 47 0 1062 335 80 60 chr10 57861521 57862150 -87727138 + L1MB1 LINE L1 792 1432 -5221 * 2488 259 65 36 chr10 57862133 57863788 -87725500 + L1MB1 LINE L1 1811 3599 -3133 718 172 137 5 chr10 57863926 57864194 -87725094 + LTR47A LTR ERVL 1 356 -96 3532 237 121 20 chr10 57864203 57865528 -87723760 + L1MB1 LINE L1 3614 5072 -1660 3408 183 85 35 chr10 57865551 57866518 -87722770 - L1PA16 LINE L1 0 6166 5147 1171 196 56 95 chr10 57868349 57868707 -87720581 + MLT1A1 LTR MaLR 4 347 -18 183 42 0 0 chr10 57868939 57868963 -87720325 + (GA)n Simple_repeat Simple_repeat 1 24 0 416 335 94 9 chr10 57869434 57869667 -87719621 - MIR SINE MIR -1 261 9 467 242 11 11 chr10 57869941 57870036 -87719252 - MER8 DNA MER2_type -144 95 1 189 318 48 0 chr10 57870042 57870105 -87719183 + L2 LINE L2 3244 3309 -4 470 209 172 0 chr10 57870246 57870380 -87718908 - L1M4 LINE L1 -1546 4600 4444 * 3204 196 10 55 chr10 57870372 57871175 -87718113 + L1MB1 LINE L1 5988 6754 0 347 331 31 25 chr10 57871191 57871351 -87717937 + MIR SINE MIR 36 196 -66 473 284 83 18 chr10 57871385 57871554 -87717734 + L2 LINE L2 342 521 -2793 341 314 16 16 chr10 57872029 57872153 -87717135 + L2 LINE L2 3172 3295 -18 23 54 0 0 chr10 57872414 57872451 -87716837 + AT_rich Low_complexity Low_complexity 1 37 0 297 304 0 29 chr10 57873909 57874011 -87715277 + MIR SINE MIR 59 157 -105 185 264 184 11 chr10 57874043 57874130 -87715158 + MIR SINE MIR 161 262 0 2012 125 47 39 chr10 57874201 57874562 -87714726 - THE1B LTR MaLR 0 364 1 247 387 25 0 chr10 57875335 57875454 -87713834 - MLT1I LTR MaLR -197 212 91 1457 217 60 22 chr10 57876122 57876490 -87712798 + MLT1B LTR MaLR 1 382 -8 27 29 0 0 chr10 57876611 57876645 -87712643 + AT_rich Low_complexity Low_complexity 1 34 0 383 309 56 19 chr10 57876650 57876812 -87712476 - MIR SINE MIR -31 231 64 638 354 24 0 chr10 57876890 57877099 -87712189 - MIR SINE MIR -47 215 2 1409 146 47 65 chr10 57877486 57877808 -87711480 - L1MA7 LINE L1 -6 6285 5970 2265 52 11 0 chr10 57878560 57878846 -87710442 + AluY SINE Alu 1 289 -22 756 145 0 0 chr10 57878849 57878980 -87710308 + (GA)n Simple_repeat Simple_repeat 2 132 0 427 17 33 0 chr10 57879043 57879103 -87710185 + (TG)n Simple_repeat Simple_repeat 2 63 0 8586 240 47 27 chr10 57881095 57883101 -87706187 + L1P4 LINE L1 689 2652 -3571 2027 148 0 3 chr10 57883101 57883399 -87705889 + AluSx SINE Alu 1 297 -15 8586 240 47 27 chr10 57883399 57885999 -87703289 + L1P4 LINE L1 2652 5517 -706 217 51 51 0 chr10 57887054 57887093 -87702195 + (TA)n Simple_repeat Simple_repeat 1 41 0 183 80 0 0 chr10 57888540 57888565 -87700723 + (A)n Simple_repeat Simple_repeat 1 25 0 819 241 15 69 chr10 57888733 57888995 -87700293 - MER102b DNA MER1_type 0 341 94 512 323 26 20 chr10 57889590 57889785 -87699503 + MIR SINE MIR 53 248 -14 356 272 64 8 chr10 57889860 57889985 -87699303 - MIR SINE MIR -65 197 66 24 0 0 0 chr10 57890253 57890277 -87699011 + AT_rich Low_complexity Low_complexity 1 24 0 642 253 15 40 chr10 57891751 57891949 -87697339 - L2 LINE L2 0 3313 3121 327 265 18 12 chr10 57892965 57893131 -87696157 + (TA)n Simple_repeat Simple_repeat 1 167 0 1895 156 0 17 chr10 57893401 57893702 -87695586 + AluSx SINE Alu 1 296 -16 25 75 0 0 chr10 57893764 57893817 -87695471 + AT_rich Low_complexity Low_complexity 1 53 0 185 333 0 51 chr10 57895268 57895346 -87693942 - L2 LINE L2 0 3313 3240 3336 133 6 20 chr10 57895486 57895997 -87693291 + MER1A DNA MER1_type 26 529 0 763 271 99 53 chr10 57896006 57896290 -87692998 + MLT1E LTR MaLR 87 383 -210 29 101 0 0 chr10 57896315 57896414 -87692874 + AT_rich Low_complexity Low_complexity 1 99 0 22 0 0 0 chr10 57896703 57896725 -87692563 + AT_rich Low_complexity Low_complexity 1 22 0 2188 59 0 11 chr10 57896725 57897012 -87692276 - L1PA7 LINE L1 -23 6131 5848 2265 98 3 0 chr10 57897062 57897368 -87691920 - AluSp SINE Alu -6 307 1 349 261 0 0 chr10 57898398 57898467 -87690821 - Tigger2 DNA MER2_type -2649 69 1 25 31 0 0 chr10 57898757 57898789 -87690499 + AT_rich Low_complexity Low_complexity 1 32 0 29 28 0 0 chr10 57899759 57899795 -87689493 + AT_rich Low_complexity Low_complexity 1 36 0 1154 201 58 31 chr10 57900730 57901023 -87688265 + AluJo SINE Alu 11 311 -1 204 182 0 0 chr10 57901774 57901818 -87687470 + (TA)n Simple_repeat Simple_repeat 2 45 0 2630 33 0 0 chr10 57902539 57902842 -87686446 + AluY SINE Alu 1 303 -8 536 266 188 27 chr10 57904069 57904168 -87685120 - L2 LINE L2 -88 3225 3143 2339 108 37 0 chr10 57904168 57904519 -87684769 + THE1B LTR MaLR 1 364 0 536 266 188 27 chr10 57904519 57904754 -87684534 - L2 LINE L2 -170 3143 2837 * 1073 277 188 24 chr10 57904724 57905384 -87683904 - L2 LINE L2 -830 2484 1717 233 312 19 64 chr10 57905590 57905747 -87683541 - L2 LINE L2 -1935 1379 1230 242 351 61 9 chr10 57906406 57906520 -87682768 - MIR3 SINE MIR 0 208 89 327 191 0 36 chr10 57906599 57906683 -87682605 + L1PA16 LINE L1 6079 6159 -7 33 25 0 0 chr10 57906759 57906799 -87682489 + AT_rich Low_complexity Low_complexity 1 40 0 1373 181 14 0 chr10 57906806 57907082 -87682206 - L1MB3 LINE L1 -9 6174 5895 250 288 86 61 chr10 57907144 57907342 -87681946 - MIR SINE MIR -11 251 49 370 317 21 7 chr10 57907386 57907528 -87681760 + MIR SINE MIR 13 156 -106 275 354 22 11 chr10 57907716 57907897 -87681391 + L1MC/D LINE L1 5578 5760 -2048 3691 153 73 18 chr10 57908468 57909230 -87680058 - Tigger3b DNA MER2_type -425 806 3 1515 178 126 3 chr10 57909242 57909568 -87679720 - MER47A DNA MER2_type 0 366 1 882 83 83 0 chr10 57909685 57909806 -87679482 - AluSg SINE Alu -179 131 1 1075 244 51 3 chr10 57910064 57910396 -87678892 - L1MB1 LINE L1 -1013 5133 4786 2184 189 20 69 chr10 57910398 57911090 -87678198 + L1MB1 LINE L1 5135 5791 -377 1053 237 122 56 chr10 57911098 57911508 -87677780 + MER31B LTR ERV1 1 437 -29 662 188 51 0 chr10 57911541 57911679 -87677609 + L1MB1 LINE L1 6023 6167 -1 23 0 0 0 chr10 57911679 57911702 -87677586 + AT_rich Low_complexity Low_complexity 1 23 0 29 0 0 0 chr10 57911714 57911743 -87677545 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr10 57911756 57911778 -87677510 + AT_rich Low_complexity Low_complexity 1 22 0 216 368 58 11 chr10 57911854 57911941 -87677347 + MIR SINE MIR 36 126 -82 24 53 0 0 chr10 57912778 57912816 -87676472 + AT_rich Low_complexity Low_complexity 1 38 0 1810 158 21 36 chr10 57913659 57913941 -87675347 + Tigger3(Golem) DNA MER2_type 2 280 -2749 2177 106 0 17 chr10 57913941 57914243 -87675045 - AluSc SINE Alu -12 297 1 1810 158 21 36 chr10 57914243 57914296 -87674992 + Tigger3(Golem) DNA MER2_type 280 332 -2697 21 0 0 0 chr10 57915768 57915789 -87673499 + AT_rich Low_complexity Low_complexity 1 21 0 1582 115 8 12 chr10 57916504 57916527 -87672761 - L1PA8A LINE L1 0 6131 6109 261 57 0 0 chr10 57916527 57916562 -87672726 + (CAA)n Simple_repeat Simple_repeat 2 36 0 1582 115 8 12 chr10 57916562 57916790 -87672498 - L1PA8A LINE L1 -22 6109 5881 238 240 190 33 chr10 57917576 57917697 -87671591 + MIR SINE MIR 18 157 -105 10663 158 56 16 chr10 57918053 57918635 -87670653 + Tigger1 DNA MER2_type 1 558 -1860 1367 77 10 43 chr10 57918635 57918863 -87670425 + L1PA4 LINE L1 5939 6159 0 10663 158 56 16 chr10 57918863 57920241 -87669047 + Tigger1 DNA MER2_type 558 2041 -377 516 237 59 8 chr10 57920586 57920704 -87668584 - FLAM_A SINE Alu -9 124 1 180 0 0 0 chr10 57921146 57921166 -87668122 + (TA)n Simple_repeat Simple_repeat 1 20 0 787 118 35 6 chr10 57921256 57921426 -87667862 + GA-rich Low_complexity Low_complexity 3 177 0 320 254 98 107 chr10 57922170 57922394 -87666894 + MIR SINE MIR 14 235 -27 7331 220 48 38 chr10 57923623 57928955 -87660333 + L1PA15 LINE L1 1398 6811 -5 420 316 45 0 chr10 57929040 57929173 -87660115 + MIR SINE MIR 37 175 -87 1926 127 7 0 chr10 57930261 57930552 -87658736 - AluSx SINE Alu -19 293 1 26 30 0 0 chr10 57931164 57931197 -87658091 + AT_rich Low_complexity Low_complexity 1 33 0 180 324 28 0 chr10 57931599 57931670 -87657618 - L2 LINE L2 -1342 1972 1900 246 128 0 0 chr10 57932410 57932449 -87656839 + (TG)n Simple_repeat Simple_repeat 1 39 0 284 188 83 160 chr10 57933043 57933187 -87656101 + MIR SINE MIR 106 238 -24 294 29 0 0 chr10 57933224 57933259 -87656029 + (TA)n Simple_repeat Simple_repeat 2 36 0 227 263 20 20 chr10 57933310 57933409 -87655879 + (TA)n Simple_repeat Simple_repeat 1 99 0 195 153 59 12 chr10 57933568 57933653 -87655635 + (TA)n Simple_repeat Simple_repeat 2 90 0 446 228 63 39 chr10 57934497 57934624 -87654664 + MER94 DNA DNA 2 131 -3 223 275 44 33 chr10 57935176 57935267 -87654021 - L3 LINE CR1 -4 1573 1482 22 35 0 0 chr10 57936461 57936490 -87652798 + AT_rich Low_complexity Low_complexity 1 29 0 309 51 0 0 chr10 57936839 57936878 -87652410 + (CA)n Simple_repeat Simple_repeat 2 40 0 180 200 0 0 chr10 57937654 57937689 -87651599 + MIR SINE MIR 100 134 -74 273 293 0 49 chr10 57938700 57938782 -87650506 + L2 LINE L2 3137 3214 -58 1156 162 5 0 chr10 57939015 57939206 -87650082 + L1PA15-16 LINE L1 11 202 -6647 2851 316 18 0 chr10 57939213 57939997 -87649291 + L1PA15-16 LINE L1 741 1538 -5311 2446 33 0 0 chr10 57939996 57940295 -87648993 - L1PA3 LINE L1 -1599 4547 4249 * 7548 31 0 0 chr10 57940295 57941900 -87647388 + L1PA3 LINE L1 4546 6150 -5 1654 254 41 26 chr10 57941937 57942312 -87646976 + L1PB4 LINE L1 690 1058 -5145 2287 106 0 16 chr10 57942312 57942623 -87646665 - AluSg SINE Alu -2 308 3 1654 254 41 26 chr10 57942623 57943095 -87646193 + L1PB4 LINE L1 1058 1644 -4559 3097 102 4 4 chr10 57943142 57943604 -87645684 - L1PA8 LINE L1 -3 6169 5708 2222 76 0 0 chr10 57943605 57943894 -87645394 + L1PA8 LINE L1 5423 5711 -420 1305 260 41 0 chr10 57943901 57944270 -87645018 + L1PB4 LINE L1 1649 2032 -4171 9214 226 21 50 chr10 57944301 57948164 -87641124 + L1PB4 LINE L1 2473 6210 -3 21 36 0 0 chr10 57948164 57948192 -87641096 + AT_rich Low_complexity Low_complexity 1 28 0 225 228 18 0 chr10 57948373 57948430 -87640858 + (TA)n Simple_repeat Simple_repeat 1 58 0 419 265 0 0 chr10 57948434 57948532 -87640756 - L1PB4 LINE L1 -14 6142 6045 201 250 0 0 chr10 57948534 57948610 -87640678 + (CATATA)n Simple_repeat Simple_repeat 2 77 0 22 70 0 0 chr10 57948834 57948877 -87640411 + AT_rich Low_complexity Low_complexity 1 43 0 643 229 0 0 chr10 57949028 57949146 -87640142 + FLAM_C SINE Alu 4 121 -22 195 125 0 0 chr10 57949157 57949197 -87640091 + (TA)n Simple_repeat Simple_repeat 1 40 0 396 0 0 0 chr10 57950050 57950094 -87639194 + (TG)n Simple_repeat Simple_repeat 2 45 0 9962 222 23 10 chr10 57950191 57954194 -87635094 + L1PA15 LINE L1 1780 6815 -1 4763 171 36 33 chr10 57954215 57955194 -87634094 + L1MA4 LINE L1 4817 5806 -494 279 0 0 0 chr10 57955194 57955225 -87634063 + (CA)n Simple_repeat Simple_repeat 2 32 0 4763 171 36 33 chr10 57955225 57955718 -87633570 + L1MA4 LINE L1 5806 6296 -4 30 0 0 0 chr10 57955722 57955752 -87633536 + AT_rich Low_complexity Low_complexity 1 30 0 3864 262 95 27 chr10 57955928 57958660 -87630628 + L1ME1 LINE L1 3240 5953 -213 843 44 0 7 chr10 57958911 57959036 -87630252 - L1M1 LINE L1 -680 5475 5376 5543 11 0 0 chr10 57959036 57959659 -87629629 + L1PA2 LINE L1 5528 6154 -1 265 317 0 24 chr10 57961246 57961328 -87627960 + MIR3 SINE MIR 108 187 -21 347 350 37 6 chr10 57961376 57961539 -87627749 - L2 LINE L2 -4 3309 3142 776 266 66 35 chr10 57961662 57961948 -87627340 - L2 LINE L2 -382 2932 2638 7335 184 44 22 chr10 57962103 57964797 -87624491 + L1MA4 LINE L1 3553 6300 0 25 51 0 0 chr10 57964883 57964922 -87624366 + AT_rich Low_complexity Low_complexity 1 39 0 1761 230 35 51 chr10 57965128 57965636 -87623652 - MLT1D LTR MaLR -5 500 1 879 266 94 75 chr10 57967527 57968051 -87621237 + MLT1F1 LTR MaLR 5 567 0 960 224 29 0 chr10 57969728 57969933 -87619355 - MER20 DNA MER1_type -1 218 8 1826 134 10 10 chr10 57969939 57970253 -87619035 + L1MA3 LINE L1 5992 6305 0 829 211 10 1 chr10 57970336 57970513 -87618775 - MER68 LTR ERV1 0 562 355 454 198 12 0 chr10 57970572 57970658 -87618630 + Tigger5 DNA MER2_type 2237 2323 0 1160 201 14 8 chr10 57970666 57970957 -87618331 - MER68 LTR ERV1 -226 336 9 23 0 0 0 chr10 57971399 57971422 -87617866 + AT_rich Low_complexity Low_complexity 1 23 0 2429 50 0 3 chr10 57971437 57971736 -87617552 - AluY SINE Alu -13 298 1 208 345 61 40 chr10 57971954 57972102 -87617186 + L2 LINE L2 3154 3304 -9 339 279 41 25 chr10 57973490 57973612 -87615676 + MIR SINE MIR 17 140 -122 197 108 27 0 chr10 57973720 57973757 -87615531 + CT-rich Low_complexity Low_complexity 2 39 0 192 354 87 31 chr10 57974822 57974983 -87614305 - MIR SINE MIR -68 194 25 22 0 0 0 chr10 57975605 57975627 -87613661 + AT_rich Low_complexity Low_complexity 1 22 0 2591 45 0 3 chr10 57975825 57976136 -87613152 + AluY SINE Alu 1 310 -1 214 50 50 0 chr10 57976140 57976180 -87613108 + (CAAA)n Simple_repeat Simple_repeat 2 43 0 1837 133 20 3 chr10 57976819 57977112 -87612176 - AluSx SINE Alu -13 299 2 186 71 0 0 chr10 57977127 57977155 -87612133 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 424 53 0 0 chr10 57977479 57977582 -87611706 - AluY SINE Alu 0 344 242 1115 45 6 114 chr10 57977582 57977758 -87611530 - AluY SINE Alu -154 157 1 25 31 0 0 chr10 57978045 57978077 -87611211 + AT_rich Low_complexity Low_complexity 1 32 0 22 70 0 0 chr10 57978247 57978290 -87610998 + AT_rich Low_complexity Low_complexity 1 43 0 1867 126 65 0 chr10 57978569 57978862 -87610426 - AluSx SINE Alu 0 312 1 203 304 17 70 chr10 57979425 57979540 -87609748 + MIR SINE MIR 148 256 -6 2033 102 41 3 chr10 57979574 57979687 -87609601 + AluSx SINE Alu 6 113 -199 369 0 0 0 chr10 57979687 57979728 -87609560 + (CA)n Simple_repeat Simple_repeat 2 42 0 2033 102 41 3 chr10 57979728 57979908 -87609380 + AluSx SINE Alu 113 310 -2 180 97 0 0 chr10 57980317 57980348 -87608940 + (TCTG)n Simple_repeat Simple_repeat 4 34 0 213 39 0 0 chr10 57980348 57980374 -87608914 + (GA)n Simple_repeat Simple_repeat 1 26 0 2643 23 3 0 chr10 57980907 57981211 -87608077 - AluY SINE Alu -6 305 1 183 42 0 0 chr10 57981360 57981384 -87607904 + (GA)n Simple_repeat Simple_repeat 1 24 0 273 286 8 34 chr10 57981454 57981573 -87607715 + MLT1K LTR MaLR 360 475 -113 1226 233 80 0 chr10 57981816 57982091 -87607197 + Tigger5 DNA MER2_type 1 297 -2026 373 232 0 12 chr10 57982086 57982168 -87607120 + Tigger5 DNA MER2_type 2242 2322 -1 * 212 162 0 0 chr10 57984570 57984607 -87604681 + (CAATA)n Simple_repeat Simple_repeat 2 38 0 304 341 91 53 chr10 57984670 57984990 -87604298 - MLT1K LTR MaLR -124 464 133 1964 134 0 3 chr10 57985030 57985314 -87603974 + AluSx SINE Alu 1 334 0 460 0 0 0 chr10 57985314 57985365 -87603923 + (CAAAA)n Simple_repeat Simple_repeat 2 155 0 1187 159 21 17 chr10 57987119 57987377 -87601911 + L1MA4 LINE L1 6022 6273 -27 232 80 0 40 chr10 57987377 57987427 -87601861 + (TA)n Simple_repeat Simple_repeat 1 48 0 1187 159 21 17 chr10 57987427 57987455 -87601833 + L1MA4 LINE L1 6273 6299 -1 22 0 0 0 chr10 57987727 57987749 -87601539 + AT_rich Low_complexity Low_complexity 1 22 0 419 266 24 32 chr10 57989082 57989206 -87600082 + L2 LINE L2 3190 3312 -1 207 389 83 0 chr10 57989249 57989406 -87599882 - MIR SINE MIR -10 252 83 2354 73 0 3 chr10 57990278 57990579 -87598709 + AluY SINE Alu 1 300 -11 3109 222 34 11 chr10 57990969 57991757 -87597531 + L1MC3 LINE L1 6980 7785 0 246 378 46 36 chr10 57991812 57992008 -87597280 + MIR3 SINE MIR 2 199 -9 192 368 26 0 chr10 57992339 57992456 -87596832 + L2 LINE L2 2734 2853 -461 351 327 93 37 chr10 57993170 57993384 -87595904 + LTR67 LTR ERVL 127 352 -205 698 250 20 15 chr10 57993570 57993774 -87595514 - MER3 DNA MER1_type -4 205 1 5461 78 33 4 chr10 57996102 57996884 -87592404 + L1PA11 LINE L1 5349 6153 -21 2555 61 0 0 chr10 57997647 57997958 -87591330 - AluY SINE Alu 0 311 1 244 204 0 0 chr10 57998139 57998188 -87591100 + (CA)n Simple_repeat Simple_repeat 2 50 0 23 0 0 0 chr10 57998207 57998230 -87591058 + AT_rich Low_complexity Low_complexity 1 23 0 3669 148 30 11 chr10 57998975 57999246 -87590042 - L1MA5A LINE L1 0 6297 6033 2270 50 40 3 chr10 57999246 57999546 -87589742 + AluY SINE Alu 1 311 0 3669 148 30 11 chr10 57999546 57999936 -87589352 - L1MA5A LINE L1 -264 6033 5623 23 0 0 0 chr10 58002987 58003010 -87586278 + AT_rich Low_complexity Low_complexity 1 23 0 276 289 0 0 chr10 58003026 58003116 -87586172 - L1MC4 LINE L1 -1339 6703 6614 408 200 0 0 chr10 58003116 58003201 -87586087 + (TA)n Simple_repeat Simple_repeat 1 85 0 308 281 41 16 chr10 58003503 58003624 -87585664 + LTR67 LTR ERVL 432 555 -2 186 43 0 0 chr10 58004392 58004415 -87584873 + (A)n Simple_repeat Simple_repeat 1 23 0 1327 65 0 0 chr10 58004827 58004997 -87584291 - L1PA7 LINE L1 -3 6151 5982 388 264 145 25 chr10 58005885 58006044 -87583244 + MIR SINE MIR 3 180 -82 4449 214 45 60 chr10 58006293 58007383 -87581905 + L1M2b LINE L1 1552 2650 -4559 1004 144 0 62 chr10 58007383 58007507 -87581781 + L1PB3 LINE L1 5972 6081 -73 1768 181 18 39 chr10 58007507 58007889 -87581399 - THE1C LTR MaLR 0 375 2 1004 144 0 62 chr10 58007889 58007958 -87581330 + L1PB3 LINE L1 6081 6153 -1 4449 214 45 60 chr10 58007958 58008346 -87580942 + L1M2b LINE L1 2650 3042 -4167 27 0 0 0 chr10 58008529 58008556 -87580732 + AT_rich Low_complexity Low_complexity 1 27 0 231 243 176 0 chr10 58010217 58010291 -87578997 - L2 LINE L2 0 3272 3186 234 226 87 70 chr10 58011416 58011531 -87577757 + MLT1K LTR MaLR 402 518 -70 21 57 0 0 chr10 58012285 58012320 -87576968 + AT_rich Low_complexity Low_complexity 1 35 0 213 39 0 0 chr10 58013079 58013105 -87576183 + (TG)n Simple_repeat Simple_repeat 1 26 0 227 161 18 0 chr10 58013979 58014035 -87575253 + (TA)n Simple_repeat Simple_repeat 2 58 0 359 315 60 38 chr10 58014035 58014270 -87575018 + MLT1J1 LTR MaLR 31 270 -176 350 309 54 47 chr10 58014399 58014677 -87574611 + HAL1 LINE L1 824 1103 -1404 388 319 37 0 chr10 58014689 58014824 -87574464 + L2 LINE L2 1844 1983 -1331 185 245 191 53 chr10 58014914 58015008 -87574280 - L2 LINE L2 -1387 1927 1821 1057 299 145 5 chr10 58015155 58015576 -87573712 + L2 LINE L2 2236 2715 -599 806 284 66 35 chr10 58015611 58015977 -87573311 + L1MDa LINE L1 75 451 -6089 991 225 50 100 chr10 58016044 58016499 -87572789 + MLT2B1 LTR ERVL 1 414 0 313 270 40 40 chr10 58017305 58017405 -87571883 - L1MC4 LINE L1 -1340 6702 6603 291 269 86 51 chr10 58017467 58017701 -87571587 + HAL1 LINE L1 2264 2505 -2 200 231 26 0 chr10 58017728 58017806 -87571482 + (TA)n Simple_repeat Simple_repeat 2 81 0 241 338 0 0 chr10 58019211 58019282 -87570006 - L2 LINE L2 0 3313 3243 251 295 129 22 chr10 58019617 58019756 -87569532 - MIR SINE MIR -94 168 15 834 20 0 0 chr10 58019881 58019981 -87569307 + (TCTA)n Simple_repeat Simple_repeat 3 102 0 245 284 0 0 chr10 58020023 58020106 -87569182 + (TCTCTG)n Simple_repeat Simple_repeat 1 83 0 223 361 0 11 chr10 58020215 58020395 -87568893 + CT-rich Low_complexity Low_complexity 2 179 0 * 275 264 11 50 chr10 58020270 58020452 -87568836 + (TCTCTG)n Simple_repeat Simple_repeat 2 176 0 396 0 0 0 chr10 58021166 58021210 -87568078 + (CA)n Simple_repeat Simple_repeat 2 45 0 180 77 0 0 chr10 58025280 58025306 -87563982 + (TC)n Simple_repeat Simple_repeat 1 26 0 216 0 0 0 chr10 58025353 58025377 -87563911 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 23 0 0 0 chr10 58027512 58027535 -87561753 + AT_rich Low_complexity Low_complexity 1 23 0 2394 58 0 0 chr10 58027699 58027994 -87561294 - AluY SINE Alu -13 298 4 198 0 0 0 chr10 58028586 58028608 -87560680 + (TA)n Simple_repeat Simple_repeat 1 22 0 23 54 0 0 chr10 58028694 58028731 -87560557 + AT_rich Low_complexity Low_complexity 1 37 0 1371 249 109 74 chr10 58029912 58030144 -87559144 - MLT1E LTR MaLR 0 593 371 2063 121 0 7 chr10 58030144 58030442 -87558846 - AluSg SINE Alu -14 296 1 1371 249 109 74 chr10 58030442 58030780 -87558508 - MLT1E LTR MaLR -222 371 3 181 140 35 0 chr10 58031331 58031388 -87557900 + (TA)n Simple_repeat Simple_repeat 2 60 0 32 0 0 0 chr10 58031627 58031659 -87557629 + AT_rich Low_complexity Low_complexity 1 32 0 196 308 19 0 chr10 58031678 58031730 -87557558 - L2 LINE L2 -9 3263 3211 21 0 0 0 chr10 58031883 58031904 -87557384 + AT_rich Low_complexity Low_complexity 1 21 0 255 269 154 0 chr10 58033295 58033373 -87555915 - L2 LINE L2 -1 3312 3223 201 121 0 0 chr10 58034788 58034821 -87554467 + (TA)n Simple_repeat Simple_repeat 2 34 0 1991 125 3 3 chr10 58035122 58035427 -87553861 - AluSc SINE Alu -4 305 1 1865 101 7 47 chr10 58035932 58036098 -87553190 - AluSx SINE Alu -13 299 128 197 56 0 56 chr10 58036098 58036134 -87553154 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2182 92 0 0 chr10 58036134 58036415 -87552873 - AluSc SINE Alu -28 281 1 1865 101 7 47 chr10 58036415 58036525 -87552763 - AluSx SINE Alu -182 130 33 568 358 73 56 chr10 58036732 58037677 -87551611 + L2 LINE L2 2005 2965 -349 256 380 60 0 chr10 58037855 58037955 -87551333 + L2 LINE L2 3134 3239 -33 337 279 74 16 chr10 58038097 58038219 -87551069 - MIR SINE MIR -62 200 72 187 399 32 16 chr10 58038216 58038358 -87550930 + L2 LINE L2 2768 2915 -399 * 954 47 79 0 chr10 58038358 58038485 -87550803 + MER85 DNA T2_type 3 139 0 187 399 32 16 chr10 58038485 58038530 -87550758 + L2 LINE L2 2915 2958 -356 4304 142 37 4 chr10 58038726 58039458 -87549830 + Tigger2 DNA MER2_type 2 757 -1961 1454 153 12 8 chr10 58039494 58039748 -87549540 + Tigger2 DNA MER2_type 2462 2716 -2 361 309 37 52 chr10 58039769 58039905 -87549383 + L2 LINE L2 3139 3272 0 316 353 41 0 chr10 58040985 58041107 -87548181 - MIR SINE MIR -121 141 15 712 244 75 119 chr10 58041977 58042272 -87547016 + MLT1G LTR MaLR 1 282 -313 345 213 46 52 chr10 58042395 58042533 -87546755 + MLT1H1 LTR MaLR 413 547 -8 732 276 0 0 chr10 58042577 58042747 -87546541 - FRAM SINE Alu -6 170 1 21 0 0 0 chr10 58044180 58044201 -87545087 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr10 58044741 58044770 -87544518 + AT_rich Low_complexity Low_complexity 1 29 0 1114 266 87 43 chr10 58045031 58045583 -87543705 - MER69 DNA AcHobo -18 2508 1933 3975 176 47 2 chr10 58045691 58046505 -87542783 - L1MA4 LINE L1 -14 6286 5437 2005 132 0 0 chr10 58046540 58046827 -87542461 - AluSx SINE Alu -12 300 14 297 128 0 0 chr10 58046865 58046912 -87542376 + (CA)n Simple_repeat Simple_repeat 2 48 0 337 316 148 25 chr10 58047110 58047306 -87541982 - MIR SINE MIR -41 221 2 26 0 0 0 chr10 58047928 58047954 -87541334 + AT_rich Low_complexity Low_complexity 1 26 0 7303 21 1 0 chr10 58048532 58049386 -87539902 - L1PA3 LINE L1 -1 6154 5300 246 174 0 0 chr10 58050180 58050226 -87539062 + (TATG)n Simple_repeat Simple_repeat 3 48 0 362 332 58 26 chr10 58050465 58050655 -87538633 - MER117 DNA MER1_type 0 197 2 213 175 0 0 chr10 58052135 58052175 -87537113 + (TATATG)n Simple_repeat Simple_repeat 2 41 0 780 304 126 34 chr10 58052304 58052945 -87536343 - L2 LINE L2 -1 3312 2607 458 319 18 4 chr10 58053075 58053259 -87536029 - MIR SINE MIR -34 228 47 293 265 0 0 chr10 58053399 58053467 -87535821 - MER94 DNA DNA -29 105 38 5246 27 0 5 chr10 58053784 58054409 -87534879 + L1PA4 LINE L1 5534 6155 0 22 35 0 0 chr10 58054751 58054780 -87534508 + AT_rich Low_complexity Low_complexity 1 29 0 27 49 0 0 chr10 58055369 58055410 -87533878 + AT_rich Low_complexity Low_complexity 1 41 0 25 0 0 0 chr10 58055574 58055599 -87533689 + AT_rich Low_complexity Low_complexity 1 25 0 231 296 83 53 chr10 58056516 58056648 -87532640 - MIR3 SINE MIR -5 203 68 1919 195 51 33 chr10 58056914 58057408 -87531880 + MLT2C2 LTR ERVL 1 554 0 24 32 0 0 chr10 58057596 58057627 -87531661 + AT_rich Low_complexity Low_complexity 1 31 0 298 243 29 14 chr10 58057695 58057765 -87531523 + MIR SINE MIR 91 161 -101 2072 106 42 0 chr10 58057854 58058137 -87531151 - AluSx SINE Alu -17 295 1 259 206 0 41 chr10 58058210 58058283 -87531005 + A-rich Low_complexity Low_complexity 1 70 0 22 0 0 0 chr10 58058914 58058936 -87530352 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr10 58059403 58059433 -87529855 + AT_rich Low_complexity Low_complexity 1 30 0 211 195 0 0 chr10 58060024 58060065 -87529223 + (CA)n Simple_repeat Simple_repeat 2 42 0 275 299 105 45 chr10 58060678 58061316 -87527972 + HAL1b LINE L1 260 935 -413 927 266 49 16 chr10 58061316 58061560 -87527728 + L1M3a LINE L1 2 253 -5702 3055 284 50 41 chr10 58061764 58061850 -87527438 + L1M3a LINE L1 477 561 -5473 2040 146 13 56 chr10 58061850 58062228 -87527060 + THE1B LTR MaLR 1 362 -2 3055 284 50 41 chr10 58062228 58065257 -87524031 + L1M3a LINE L1 561 3073 -2961 272 253 86 69 chr10 58065359 58065604 -87523684 + HAL1b LINE L1 1013 1261 -87 291 54 0 0 chr10 58065827 58065864 -87523424 + (TG)n Simple_repeat Simple_repeat 1 37 0 25 31 0 0 chr10 58068683 58068715 -87520573 + AT_rich Low_complexity Low_complexity 1 32 0 207 100 0 0 chr10 58068775 58068805 -87520483 + (T)n Simple_repeat Simple_repeat 1 30 0 266 423 8 0 chr10 58068979 58069102 -87520186 + MER91A DNA MER1_type 30 153 -43 230 206 0 27 chr10 58071024 58071097 -87518191 + T-rich Low_complexity Low_complexity 2 72 0 182 265 61 20 chr10 58071395 58071444 -87517844 - L2 LINE L2 -9 3304 3254 253 333 22 29 chr10 58071456 58071594 -87517694 - MIR SINE MIR -106 156 20 1831 187 27 73 chr10 58071609 58071762 -87517526 + MSTC LTR MaLR 11 169 -259 2275 90 3 13 chr10 58071762 58072063 -87517225 + AluSq SINE Alu 7 304 -9 1831 187 27 73 chr10 58072063 58072347 -87516941 + MSTC LTR MaLR 169 428 0 202 367 29 50 chr10 58072477 58072616 -87516672 - L2 LINE L2 -201 3071 2936 21 0 0 0 chr10 58072689 58072710 -87516578 + AT_rich Low_complexity Low_complexity 1 21 0 480 103 26 0 chr10 58073336 58073414 -87515874 + MADE1 DNA Mariner 1 80 0 1639 129 0 8 chr10 58073952 58074215 -87515073 - L1PB1 LINE L1 -1 6150 5890 765 88 0 9 chr10 58074815 58074928 -87514360 + L1MA2 LINE L1 6193 6304 0 22 88 0 0 chr10 58075006 58075063 -87514225 + AT_rich Low_complexity Low_complexity 1 57 0 1639 146 96 0 chr10 58075266 58075527 -87513761 - AluSx SINE Alu -26 286 1 26 74 0 0 chr10 58075529 58075583 -87513705 + AT_rich Low_complexity Low_complexity 1 54 0 2093 112 0 7 chr10 58076228 58076557 -87512731 + AluSg SINE Alu 1 327 0 2082 108 3 3 chr10 58076636 58076922 -87512366 + AluSp SINE Alu 1 286 -27 225 133 0 0 chr10 58076944 58076989 -87512299 - LTR66 LTR ERVL -172 438 394 310 315 16 0 chr10 58076999 58077125 -87512163 + L1MC4 LINE L1 6614 6703 -1339 270 281 16 49 chr10 58077252 58077517 -87511771 + MER46C DNA MER2_type 10 316 -22 7042 215 62 15 chr10 58077518 58079092 -87510196 - MER52A LTR ERV1 0 1755 108 1415 195 7 34 chr10 58081112 58081410 -87507878 - AluJo SINE Alu -22 290 1 2375 199 94 4 chr10 58081488 58082059 -87507229 - L1MA7 LINE L1 -4 6287 5661 27 29 0 0 chr10 58082384 58082418 -87506870 + AT_rich Low_complexity Low_complexity 1 34 0 183 284 0 111 chr10 58083335 58083416 -87505872 - MIR SINE MIR -119 143 72 211 404 36 22 chr10 58083509 58083732 -87505556 - L3 LINE CR1 -354 1223 998 3741 136 10 7 chr10 58083811 58084427 -87504861 - L1PA16 LINE L1 -12 6154 5537 1224 229 26 3 chr10 58084869 58085179 -87504109 + L1 LINE L1 3226 3542 -2604 1489 198 7 0 chr10 58085179 58085477 -87503811 + L1 LINE L1 3963 4262 -1884 1402 204 40 80 chr10 58086145 58086595 -87502693 + MSTB1 LTR MaLR 1 432 0 2325 60 0 0 chr10 58086919 58087204 -87502084 + AluY SINE Alu 1 285 -26 1224 239 127 61 chr10 58088166 58088656 -87500632 - MLT1F LTR MaLR -11 531 10 1778 253 35 41 chr10 58088692 58089202 -87500086 + MLT2B3 LTR ERVL 1 507 -47 687 166 65 7 chr10 58089193 58089332 -87499956 - THE1C LTR MaLR -228 147 1 * 230 361 42 0 chr10 58089929 58090048 -87499240 + MLT1L LTR MaLR 145 268 -347 26 64 0 0 chr10 58090273 58090320 -87498968 + AT_rich Low_complexity Low_complexity 1 47 0 1219 146 65 25 chr10 58091504 58091779 -87497509 + L1MA9 LINE L1 6021 6306 -6 1018 232 71 20 chr10 58092800 58093097 -87496191 + MLT1C LTR MaLR 154 465 -2 526 288 90 26 chr10 58093154 58093387 -87495901 + MIR SINE MIR 4 251 -11 405 293 85 30 chr10 58093868 58094032 -87495256 - MER5A DNA MER1_type -16 173 1 2521 48 0 3 chr10 58094164 58094474 -87494814 + AluY SINE Alu 3 311 0 331 250 182 7 chr10 58094696 58094844 -87494444 - MER5B DNA MER1_type -3 175 2 24 32 0 0 chr10 58095816 58095847 -87493441 + AT_rich Low_complexity Low_complexity 1 31 0 463 195 18 0 chr10 58097133 58097246 -87492042 + (TA)n Simple_repeat Simple_repeat 1 115 0 418 194 10 10 chr10 58097354 58097457 -87491831 + (TATATG)n Simple_repeat Simple_repeat 6 108 0 4338 12 0 6 chr10 58097606 58098127 -87491161 - L1PA3 LINE L1 0 6155 5659 1240 39 0 0 chr10 58098127 58098280 -87491008 + L1P LINE L1 5049 5201 -945 13158 165 36 3 chr10 58098670 58100990 -87488298 + Tigger1 DNA MER2_type 22 2417 -1 24 0 0 0 chr10 58101307 58101331 -87487957 + AT_rich Low_complexity Low_complexity 1 24 0 214 231 0 0 chr10 58101569 58101608 -87487680 + polypyrimidine Low_complexity Low_complexity 2 40 0 2203 119 0 0 chr10 58101609 58101921 -87487367 - AluSx SINE Alu 0 312 1 240 340 10 0 chr10 58102215 58102318 -87486970 + MIR SINE MIR 101 204 -58 1669 122 42 0 chr10 58102324 58102587 -87486701 - L1PA11 LINE L1 -3 6171 5898 366 115 0 0 chr10 58102837 58102898 -87486390 + (TG)n Simple_repeat Simple_repeat 2 62 0 272 343 80 14 chr10 58102942 58103155 -87486133 - MIR SINE MIR 0 262 36 31 26 0 0 chr10 58103321 58103359 -87485929 + AT_rich Low_complexity Low_complexity 1 38 0 220 310 58 11 chr10 58103958 58104045 -87485243 + MER5B DNA MER1_type 4 94 -84 328 318 119 1 chr10 58104064 58104242 -87485046 + L1 LINE L1 3995 4191 -1955 331 269 87 10 chr10 58105622 58105726 -87483562 + L2 LINE L2 3195 3306 -7 23 0 0 0 chr10 58107540 58107563 -87481725 + AT_rich Low_complexity Low_complexity 1 23 0 279 0 0 0 chr10 58108139 58108170 -87481118 + (TG)n Simple_repeat Simple_repeat 1 31 0 246 314 10 39 chr10 58108668 58108770 -87480518 + L2 LINE L2 3167 3265 -48 209 189 0 0 chr10 58109661 58109698 -87479590 + CT-rich Low_complexity Low_complexity 2 38 0 1807 134 35 0 chr10 58110141 58110424 -87478864 + AluSx SINE Alu 4 296 -16 1553 269 67 44 chr10 58111685 58112574 -87476714 - L1ME1 LINE L1 -5 6161 5199 188 33 0 33 chr10 58113160 58113190 -87476098 + (TA)n Simple_repeat Simple_repeat 2 30 0 23 33 0 0 chr10 58113406 58113436 -87475852 + AT_rich Low_complexity Low_complexity 1 30 0 26 30 0 0 chr10 58114071 58114104 -87475184 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr10 58116043 58116064 -87473224 + AT_rich Low_complexity Low_complexity 1 21 0 1038 155 25 0 chr10 58116385 58116546 -87472742 - AluSq SINE Alu -8 305 141 182 233 0 23 chr10 58117003 58117046 -87472242 - L2 LINE L2 -3 3269 3228 * 214 299 31 79 chr10 58117020 58117147 -87472141 - MIR SINE MIR -13 249 129 27 49 0 0 chr10 58117246 58117287 -87472001 + AT_rich Low_complexity Low_complexity 1 41 0 21 71 0 0 chr10 58117661 58117703 -87471585 + AT_rich Low_complexity Low_complexity 1 42 0 2083 122 0 0 chr10 58119554 58119842 -87469446 - AluSg SINE Alu -20 290 3 945 133 104 3 chr10 58121617 58121921 -87467367 + MSTA LTR MaLR 1 428 0 186 322 273 0 chr10 58122598 58122719 -87466569 - MIR3 SINE MIR -5 203 50 25 51 0 0 chr10 58122935 58122974 -87466314 + AT_rich Low_complexity Low_complexity 1 39 0 22 35 0 0 chr10 58123045 58123074 -87466214 + AT_rich Low_complexity Low_complexity 1 29 0 264 59 0 0 chr10 58123121 58123155 -87466133 + (TCCCC)n Simple_repeat Simple_repeat 2 35 0 2096 121 3 0 chr10 58123159 58123457 -87465831 - AluY SINE Alu -12 299 1 200 311 71 91 chr10 58123783 58124079 -87465209 - L2 LINE L2 -19 3294 3005 1160 165 161 31 chr10 58124695 58124955 -87464333 + AluJb SINE Alu 2 295 -7 1844 161 137 11 chr10 58125941 58126321 -87462967 + MSTA LTR MaLR 1 428 0 27 0 0 0 chr10 58128580 58128607 -87460681 + AT_rich Low_complexity Low_complexity 1 27 0 390 290 129 42 chr10 58128618 58128811 -87460477 - MIR SINE MIR -18 244 35 226 308 0 0 chr10 58130585 58130650 -87458638 + L2 LINE L2 3200 3264 -8 5767 181 51 119 chr10 58131696 58133423 -87455865 - MER52A LTR ERV1 0 1755 146 1666 161 52 30 chr10 58135256 58135623 -87453665 + THE1C LTR MaLR 1 375 0 25 51 0 0 chr10 58135815 58135854 -87453434 + AT_rich Low_complexity Low_complexity 1 39 0 1511 173 163 24 chr10 58135931 58136306 -87452982 + MSTA LTR MaLR 2 428 0 7043 186 71 11 chr10 58136307 58137793 -87451495 + MSTA-int LTR MaLR 3 1578 -2 1259 189 97 8 chr10 58137795 58138054 -87451234 + MSTA LTR MaLR 1 282 -146 239 331 160 6 chr10 58138429 58138598 -87450690 - MLT1I LTR MaLR -18 391 197 1828 117 38 0 chr10 58139493 58139759 -87449529 - AluSg SINE Alu -14 296 21 1030 136 74 0 chr10 58139760 58139922 -87449366 - AluSq SINE Alu -139 174 1 430 323 50 12 chr10 58142087 58142248 -87447040 - MIR3 SINE MIR -4 204 38 875 270 123 0 chr10 58142452 58142778 -87446510 - MER47A DNA MER2_type 0 366 1 2497 49 3 0 chr10 58143851 58144156 -87445132 + AluY SINE Alu 1 306 -5 24 0 0 0 chr10 58144960 58144984 -87444304 + AT_rich Low_complexity Low_complexity 1 24 0 2372 149 2 7 chr10 58144984 58145392 -87443896 - L1PA13 LINE L1 -2 6812 6407 1666 184 112 20 chr10 58145393 58145785 -87443503 - MSTA LTR MaLR 0 428 1 1774 147 25 10 chr10 58145785 58146099 -87443189 - MSTA-int LTR MaLR 0 1580 1262 1076 128 6 6 chr10 58146110 58146282 -87443006 + MSTA-int LTR MaLR 1480 1651 0 359 115 18 4 chr10 58146282 58146345 -87442943 + MSTA LTR MaLR 1 62 -313 6094 179 25 42 chr10 58146365 58147619 -87441669 - MSTA-int LTR MaLR -344 1236 3 1470 165 162 24 chr10 58147621 58147997 -87441291 - MSTA LTR MaLR 0 428 1 17385 209 29 10 chr10 58148000 58153073 -87436215 - L1PA13 LINE L1 -407 6407 1239 506 280 33 37 chr10 58153239 58153453 -87435835 + Charlie8 DNA MER1_type 8 220 -2197 2658 191 25 66 chr10 58153542 58154180 -87435108 + LTR9 LTR ERV1 1 612 0 588 206 0 0 chr10 58155639 58155741 -87433547 + Tigger3(Golem) DNA MER2_type 1 102 -2927 * 3892 128 100 18 chr10 58155739 58156226 -87433062 + Tigger3(Golem) DNA MER2_type 274 720 -2309 1778 127 67 0 chr10 58156226 58156493 -87432795 - AluSx SINE Alu -27 285 1 3892 128 100 18 chr10 58156493 58156541 -87432747 + Tigger3(Golem) DNA MER2_type 720 763 -2266 230 81 27 0 chr10 58156541 58156578 -87432710 + (CTCA)n Simple_repeat Simple_repeat 1 38 0 3892 128 100 18 chr10 58156578 58156906 -87432382 + Tigger3(Golem) DNA MER2_type 763 3029 0 6391 29 0 1 chr10 58158134 58158890 -87430398 + L1PA3 LINE L1 5396 6150 -5 4761 244 63 28 chr10 58159534 58162142 -87427146 - L1MB8 LINE L1 -12 6977 4274 1375 275 24 26 chr10 58162142 58162648 -87426640 + MLT1D LTR MaLR 1 505 0 4761 244 63 28 chr10 58162648 58162727 -87426561 - L1MB8 LINE L1 -2715 4274 4199 2520 64 0 3 chr10 58162739 58163051 -87426237 + AluY SINE Alu 1 311 0 377 242 16 40 chr10 58163063 58163187 -87426101 - L1MB8 LINE L1 -2769 4188 4068 1369 238 16 16 chr10 58163212 58163519 -87425769 - MLT1A1 LTR MaLR -58 307 1 2627 255 75 36 chr10 58163519 58164860 -87424428 - L1MB8 LINE L1 -2943 4014 2663 2290 263 31 26 chr10 58164893 58165772 -87423516 - L1MB8 LINE L1 -4200 1757 677 636 246 116 5 chr10 58165811 58166010 -87423278 - L1MB8 LINE L1 -6628 231 11 952 241 84 34 chr10 58166568 58166925 -87422363 - MLT1D LTR MaLR 0 505 131 293 253 13 0 chr10 58166945 58167020 -87422268 - MIR SINE MIR -94 168 93 623 57 11 0 chr10 58168833 58168921 -87420367 + (TAGA)n Simple_repeat Simple_repeat 2 90 0 233 298 12 36 chr10 58170694 58170778 -87418510 - MIR SINE MIR 0 262 181 320 277 32 0 chr10 58170898 58170992 -87418296 - MER94 DNA DNA -37 97 1 383 218 0 0 chr10 58170993 58171072 -87418216 - MIR SINE MIR -102 106 29 228 219 0 0 chr10 58171117 58171158 -87418130 + (TG)n Simple_repeat Simple_repeat 2 42 0 258 268 128 61 chr10 58171158 58171322 -87417966 + L2 LINE L2 2312 2486 -828 630 231 59 82 chr10 58171691 58171936 -87417352 - MLT2B1 LTR ERVL -156 364 126 1086 234 50 46 chr10 58171936 58172324 -87416964 + MLT2B2 LTR ERVL 1 414 0 506 259 9 0 chr10 58172324 58172439 -87416849 - MLT2B2 LTR ERVL -385 130 15 1384 181 37 30 chr10 58172670 58172969 -87416319 - THE1C LTR MaLR 0 375 75 3892 121 28 53 chr10 58172969 58173623 -87415665 - THE1C-int LTR MaLR -943 637 1 1917 178 19 26 chr10 58173623 58173804 -87415484 - THE1C LTR MaLR 0 375 194 2325 115 19 25 chr10 58173804 58174170 -87415118 + THE1B LTR MaLR 1 364 0 1917 178 19 26 chr10 58174170 58174365 -87414923 - THE1C LTR MaLR -181 194 2 4627 238 44 20 chr10 58174409 58176959 -87412329 - L1MC2 LINE L1 0 6344 3736 26 30 0 0 chr10 58177371 58177404 -87411884 + AT_rich Low_complexity Low_complexity 1 33 0 22 35 0 0 chr10 58177421 58177450 -87411838 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr10 58179740 58179763 -87409525 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr10 58180189 58180211 -87409077 + AT_rich Low_complexity Low_complexity 1 22 0 263 303 141 7 chr10 58180366 58180508 -87408780 - MIR SINE MIR -101 161 1 217 338 58 43 chr10 58180523 58180694 -87408594 + MIR SINE MIR 4 169 -40 2464 168 64 35 chr10 58181310 58181858 -87407430 + MER34B LTR ERV1 1 564 -1 281 233 27 14 chr10 58182645 58182718 -87406570 + GA-rich Low_complexity Low_complexity 2 75 0 481 259 77 12 chr10 58182836 58183138 -87406150 + L1MC4 LINE L1 7005 7330 -478 261 347 46 40 chr10 58183709 58183882 -87405406 + MIR SINE MIR 48 221 -41 326 260 0 0 chr10 58184602 58184679 -87404609 + MER52A LTR ERV1 1 77 -1678 2670 175 55 185 chr10 58184680 58185863 -87403425 + MER52A LTR ERV1 424 1452 -303 2582 216 3 49 chr10 58185852 58186463 -87402825 + MER52A LTR ERV1 1173 1755 0 * 2536 172 40 15 chr10 58187339 58187811 -87401477 - LOR1a LTR ERV1 -13 484 1 242 281 81 54 chr10 58188624 58188746 -87400542 - MER112 DNA MER1_type -19 241 124 2180 163 17 0 chr10 58188746 58189102 -87400186 + THE1B LTR MaLR 1 362 -2 242 281 81 54 chr10 58189102 58189133 -87400155 - MER112 DNA MER1_type -136 124 95 270 0 0 0 chr10 58189133 58189163 -87400125 + (TA)n Simple_repeat Simple_repeat 2 31 0 242 281 81 54 chr10 58189163 58189193 -87400095 - MER112 DNA MER1_type -165 95 52 324 203 68 14 chr10 58189408 58189556 -87399732 + (TA)n Simple_repeat Simple_repeat 2 157 0 21 0 0 0 chr10 58189710 58189731 -87399557 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr10 58189807 58189833 -87399455 + AT_rich Low_complexity Low_complexity 1 26 0 3201 150 46 24 chr10 58189859 58190078 -87399210 - MER7C DNA MER2_type -2427 601 388 2006 148 34 25 chr10 58190078 58190435 -87398853 + THE1B LTR MaLR 5 364 0 3201 150 46 24 chr10 58190435 58190803 -87398485 - MER7C DNA MER2_type -2640 388 1 971 262 132 47 chr10 58190809 58191211 -87398077 - L1ME1 LINE L1 -33 6202 5739 1385 230 60 42 chr10 58191211 58191594 -87397694 - MLT1B LTR MaLR 0 390 1 971 262 132 47 chr10 58191594 58191745 -87397543 - L1ME1 LINE L1 -496 5739 5602 311 229 28 18 chr10 58191750 58191859 -87397429 - L1ME1 LINE L1 -3560 2655 2546 3004 277 90 34 chr10 58191903 58193419 -87395869 - L1ME1 LINE L1 -4746 1650 50 1182 202 136 42 chr10 58193489 58193821 -87395467 + MLT1A1 LTR MaLR 3 365 0 584 219 135 23 chr10 58193822 58194049 -87395239 + MLT1A1-int LTR MaLR 3 298 -1414 964 239 33 29 chr10 58194054 58194297 -87394991 + Tigger7 DNA MER2_type 1 244 -2243 1920 206 35 0 chr10 58194314 58194683 -87394605 + MLT1A1-int LTR MaLR 1354 1735 0 910 229 54 111 chr10 58194683 58195071 -87394217 + MLT1A2 LTR MaLR 1 366 -8 261 271 29 0 chr10 58195226 58195296 -87393992 + L2 LINE L2 3239 3310 -3 2169 118 0 7 chr10 58195782 58196087 -87393201 + AluSq SINE Alu 1 303 -10 2281 88 0 10 chr10 58196091 58196398 -87392890 + AluSc SINE Alu 1 304 -5 32 0 0 0 chr10 58196516 58196548 -87392740 + AT_rich Low_complexity Low_complexity 1 32 0 240 111 0 0 chr10 58197546 58197582 -87391706 + (TC)n Simple_repeat Simple_repeat 2 37 0 468 62 0 0 chr10 58197582 58197646 -87391642 + (CA)n Simple_repeat Simple_repeat 1 64 0 24 0 0 0 chr10 58197831 58197855 -87391433 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr10 58197950 58197973 -87391315 + AT_rich Low_complexity Low_complexity 1 23 0 190 125 42 0 chr10 58198009 58198057 -87391231 + (TA)n Simple_repeat Simple_repeat 1 50 0 327 294 192 0 chr10 58198791 58198937 -87390351 + MIR SINE MIR 73 246 -16 180 320 167 6 chr10 58199035 58199191 -87390097 - L2 LINE L2 -126 3146 2966 1911 212 74 93 chr10 58199799 58200538 -87388750 - LTR8A LTR ERV1 -2 725 1 3163 179 15 35 chr10 58200672 58201320 -87387968 + MER41B LTR ERV1 1 635 0 202 390 88 51 chr10 58201358 58201883 -87387405 + L3 LINE CR1 427 970 -607 2427 191 45 17 chr10 58201972 58202506 -87386782 + MER34C LTR ERV1 37 585 0 531 253 158 0 chr10 58202520 58202678 -87386610 - MIR SINE MIR -65 197 15 380 304 50 12 chr10 58202731 58202892 -87386396 + L3 LINE CR1 1162 1328 -249 2080 144 0 0 chr10 58202912 58203211 -87386077 + AluSx SINE Alu 2 300 -12 474 136 0 0 chr10 58203227 58203308 -87385980 + L1MA4 LINE L1 5751 5831 -469 903 72 80 0 chr10 58203609 58203734 -87385554 + MER85 DNA T2_type 1 135 -4 1284 243 21 0 chr10 58205314 58205594 -87383694 - AluJo SINE Alu -26 286 1 291 333 142 23 chr10 58206349 58206568 -87382720 - MIR SINE MIR -1 261 17 26 0 0 0 chr10 58206669 58206695 -87382593 + AT_rich Low_complexity Low_complexity 1 26 0 1813 172 105 98 chr10 58207620 58208081 -87381207 + MER39 LTR ERV1 1 511 -196 1604 184 14 7 chr10 58208081 58208369 -87380919 + AluJo SINE Alu 1 290 -22 1813 172 105 98 chr10 58208369 58208563 -87380725 + MER39 LTR ERV1 511 702 -5 282 217 0 36 chr10 58208599 58208682 -87380606 + MER116 DNA Mariner 1 80 0 249 298 12 0 chr10 58208828 58208912 -87380376 + (TA)n Simple_repeat Simple_repeat 1 85 0 2108 211 7 5 chr10 58208916 58209329 -87379959 - MER47B DNA MER2_type -1 417 4 382 338 69 7 chr10 58210104 58210249 -87379039 - MIR SINE MIR -104 158 5 5956 91 7 17 chr10 58210412 58211842 -87377446 - L1PA8 LINE L1 -1 6171 4709 10117 107 53 3 chr10 58211842 58213332 -87375956 + THE1B-int LTR MaLR 16 1580 0 2127 112 48 31 chr10 58213332 58213690 -87375598 + THE1B LTR MaLR 1 364 0 360 281 0 0 chr10 58213704 58213800 -87375488 - MER103 DNA DNA -49 117 22 25 0 0 0 chr10 58215410 58215435 -87373853 + AT_rich Low_complexity Low_complexity 1 25 0 28 61 0 0 chr10 58215589 58215638 -87373650 + AT_rich Low_complexity Low_complexity 1 49 0 2282 80 0 10 chr10 58215998 58216297 -87372991 + AluY SINE Alu 4 299 -12 22 0 0 0 chr10 58216377 58216399 -87372889 + AT_rich Low_complexity Low_complexity 1 22 0 216 381 61 22 chr10 58216567 58216748 -87372540 - L2 LINE L2 -693 2621 2434 24 0 0 0 chr10 58218095 58218119 -87371169 + AT_rich Low_complexity Low_complexity 1 24 0 2324 74 0 49 chr10 58218619 58218943 -87370345 + AluY SINE Alu 1 308 -3 2723 157 4 62 chr10 58219083 58219611 -87369677 + LOR1a LTR ERV1 1 497 0 9588 134 45 41 chr10 58219611 58220353 -87368935 + LOR1a-int LTR ERV1 1 738 -7382 2211 91 7 7 chr10 58220353 58220650 -87368638 + AluSq SINE Alu 1 297 -16 9588 134 45 41 chr10 58220650 58221706 -87367582 + LOR1a-int LTR ERV1 738 1807 -6313 697 144 36 14 chr10 58221694 58221833 -87367455 + LOR1a-int LTR ERV1 1940 2081 -6039 * 697 23 0 11 chr10 58221839 58221927 -87367361 + L1PA3 LINE L1 6069 6155 0 5879 136 14 15 chr10 58222026 58223055 -87366233 + LOR1a-int LTR ERV1 2098 3125 -4995 569 233 14 20 chr10 58223055 58223201 -87366087 + MER52A LTR ERV1 1 145 -1610 683 281 142 32 chr10 58223572 58224003 -87365285 - L2 LINE L2 -1 3312 2835 1027 143 0 0 chr10 58224687 58224834 -87364454 - AluSq/x SINE Alu -165 147 1 21 0 0 0 chr10 58225118 58225139 -87364149 + AT_rich Low_complexity Low_complexity 1 21 0 1181 95 154 36 chr10 58225145 58225366 -87363922 - L1MA5A LINE L1 -5 6292 6046 938 279 21 11 chr10 58225456 58225736 -87363552 - AluJb SINE Alu -19 283 1 323 130 0 0 chr10 58225906 58225960 -87363328 + Alu SINE Alu 247 300 0 345 47 0 0 chr10 58226155 58226198 -87363090 + (CA)n Simple_repeat Simple_repeat 2 44 0 217 331 174 0 chr10 58226296 58226417 -87362871 - L3 LINE CR1 -12 1565 1424 32 0 0 0 chr10 58227314 58227346 -87361942 + AT_rich Low_complexity Low_complexity 1 32 0 348 24 0 0 chr10 58228020 58228061 -87361227 + (TA)n Simple_repeat Simple_repeat 2 42 0 22 35 0 0 chr10 58228113 58228142 -87361146 + AT_rich Low_complexity Low_complexity 1 29 0 391 307 88 0 chr10 58228369 58228506 -87360782 - Charlie8 DNA MER1_type -2268 149 1 1583 188 0 41 chr10 58228507 58228826 -87360462 - AluJb SINE Alu -6 306 1 1089 39 0 0 chr10 58229554 58229682 -87359606 - L1PA7 LINE L1 -18 6136 6009 203 0 37 0 chr10 58231412 58231439 -87357849 + (CA)n Simple_repeat Simple_repeat 2 29 0 309 175 0 16 chr10 58231440 58231503 -87357785 - L1MC4 LINE L1 -1340 6702 6641 463 195 18 0 chr10 58231611 58231724 -87357564 + (TA)n Simple_repeat Simple_repeat 2 116 0 24 32 0 0 chr10 58233010 58233041 -87356247 + AT_rich Low_complexity Low_complexity 1 31 0 28 71 0 0 chr10 58233522 58233578 -87355710 + AT_rich Low_complexity Low_complexity 1 56 0 285 135 0 0 chr10 58233579 58233631 -87355657 + (T)n Simple_repeat Simple_repeat 1 52 0 225 265 0 0 chr10 58233703 58233771 -87355517 + T-rich Low_complexity Low_complexity 1 68 0 21 67 0 0 chr10 58233779 58233809 -87355479 + AT_rich Low_complexity Low_complexity 1 30 0 4216 4 2 0 chr10 58233926 58234406 -87354882 - L1P1 LINE L1 -375 5780 5300 246 174 0 0 chr10 58235200 58235246 -87354042 + (TATG)n Simple_repeat Simple_repeat 3 48 0 362 332 58 26 chr10 58235485 58235675 -87353613 - MER117 DNA MER1_type 0 197 2 213 175 0 0 chr10 58237155 58237195 -87352093 + (TATATG)n Simple_repeat Simple_repeat 2 41 0 780 304 126 34 chr10 58237324 58237965 -87351323 - L2 LINE L2 -1 3312 2607 458 319 18 4 chr10 58238095 58238279 -87351009 - MIR SINE MIR -34 228 47 293 265 0 0 chr10 58238419 58238487 -87350801 - MER94 DNA DNA -29 105 38 5206 32 0 0 chr10 58238803 58239425 -87349863 + L1PA4 LINE L1 5533 6154 -1 26 0 0 0 chr10 58240003 58240029 -87349259 + AT_rich Low_complexity Low_complexity 1 26 0 337 316 148 25 chr10 58240651 58240847 -87348441 + MIR SINE MIR 2 221 -41 297 128 0 0 chr10 58241045 58241092 -87348196 + (TG)n Simple_repeat Simple_repeat 2 48 0 2005 132 0 0 chr10 58241130 58241417 -87347871 + AluSx SINE Alu 14 300 -12 3975 176 47 2 chr10 58241452 58242266 -87347022 + L1MA4 LINE L1 5437 6286 -14 1114 266 87 43 chr10 58242374 58242926 -87346362 + MER69 DNA AcHobo 1933 2508 -18 22 35 0 0 chr10 58243187 58243216 -87346072 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr10 58243756 58243777 -87345511 + AT_rich Low_complexity Low_complexity 1 21 0 732 276 0 0 chr10 58245210 58245380 -87343908 + FRAM SINE Alu 1 170 -6 345 213 46 52 chr10 58245424 58245562 -87343726 - MLT1G LTR MaLR -8 547 413 712 244 75 119 chr10 58245685 58245980 -87343308 - MLT1G LTR MaLR -313 282 1 316 353 41 0 chr10 58246850 58246972 -87342316 + MIR SINE MIR 15 141 -121 259 280 114 23 chr10 58248243 58248375 -87340913 - MIR3 SINE MIR -5 203 60 2077 103 0 13 chr10 58248700 58249000 -87340288 - AluY SINE Alu -15 296 1 468 322 99 15 chr10 58249792 58249994 -87339294 - MIR SINE MIR -1 261 43 22 0 0 0 chr10 58250867 58250889 -87338399 + AT_rich Low_complexity Low_complexity 1 22 0 916 122 12 41 chr10 58250889 58251061 -87338227 - AluJb SINE Alu -26 286 120 264 297 95 9 chr10 58252118 58252234 -87337054 - MIR SINE MIR -101 161 37 188 299 72 52 chr10 58253502 58253599 -87335689 + L2 LINE L2 3168 3266 -6 23 0 0 0 chr10 58253817 58253840 -87335448 + AT_rich Low_complexity Low_complexity 1 23 0 347 336 35 9 chr10 58257705 58257821 -87331467 + L2 LINE L2 3148 3266 -6 1594 188 13 17 chr10 58258810 58259159 -87330129 - AluJb SINE Alu 0 312 1 24 0 0 0 chr10 58259911 58259935 -87329353 + AT_rich Low_complexity Low_complexity 1 24 0 321 47 0 0 chr10 58262128 58262171 -87327117 + (TTG)n Simple_repeat Simple_repeat 2 44 0 35 0 0 0 chr10 58262573 58262608 -87326680 + AT_rich Low_complexity Low_complexity 1 35 0 2320 81 0 0 chr10 58265127 58265424 -87323864 + AluSg SINE Alu 1 297 -13 1436 225 88 0 chr10 58266319 58266683 -87322605 - MSTD LTR MaLR 0 396 1 23 0 0 0 chr10 58267413 58267436 -87321852 + AT_rich Low_complexity Low_complexity 1 23 0 201 261 0 0 chr10 58268122 58268168 -87321120 + L2 LINE L2 3265 3310 -3 1007 206 80 82 chr10 58268502 58268866 -87320422 - MLT1A1 LTR MaLR -2 363 1 3773 233 61 78 chr10 58268866 58270092 -87319196 - MLT1A1-int LTR MaLR 0 1735 532 483 102 95 80 chr10 58270092 58270229 -87319059 + MER85 DNA T2_type 1 139 0 3773 233 61 78 chr10 58270229 58270290 -87318998 - MLT1A1-int LTR MaLR -1203 532 471 6819 62 10 3 chr10 58270736 58271610 -87317678 - MER11B LTR ERVK -356 880 1 225 316 13 13 chr10 58271610 58271667 -87317621 + MER52A LTR ERV1 243 299 -1456 4955 189 34 23 chr10 58271689 58272651 -87316637 + MER52A LTR ERV1 225 1755 0 3947 181 47 55 chr10 58272651 58273765 -87315523 + LOR1a-int LTR ERV1 3122 4226 -3894 7710 128 51 6 chr10 58273765 58275045 -87314243 + LOR1a-int LTR ERV1 4727 6064 -2056 421 202 22 0 chr10 58275044 58275133 -87314155 + LOR1a-int LTR ERV1 8030 8120 0 * 2741 146 44 10 chr10 58275134 58275615 -87313673 + LOR1a LTR ERV1 1 497 0 585 256 0 0 chr10 58275887 58276025 -87313263 + FLAM_A SINE Alu 1 138 0 198 0 0 0 chr10 58276641 58276663 -87312625 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 1281 182 11 83 chr10 58276749 58277122 -87312166 - L1MA7 LINE L1 0 6291 5946 328 204 247 0 chr10 58277334 58277427 -87311861 + MSTA LTR MaLR 87 202 -226 1385 198 4 12 chr10 58277429 58277681 -87311607 + MSTA-int LTR MaLR 1194 1443 -208 1440 176 114 73 chr10 58277690 58278048 -87311240 + MSTA LTR MaLR 55 427 -1 460 308 76 0 chr10 58278314 58278512 -87310776 - MER58C DNA MER1_type -2 213 1 239 270 42 74 chr10 58278549 58278764 -87310524 + L1MC4 LINE L1 7505 7712 -330 261 0 0 0 chr10 58279682 58279711 -87309577 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 240 100 0 0 chr10 58280047 58280087 -87309201 + (TG)n Simple_repeat Simple_repeat 1 40 0 180 0 0 0 chr10 58281009 58281029 -87308259 + (TAAA)n Simple_repeat Simple_repeat 3 22 0 437 265 191 45 chr10 58281073 58281450 -87307838 - L2 LINE L2 0 3313 2882 737 372 121 24 chr10 58283332 58284298 -87304990 + L2 LINE L2 1870 2929 -385 196 343 87 25 chr10 58284386 58284628 -87304660 + L2 LINE L2 3057 3313 0 1558 151 0 32 chr10 58285735 58285987 -87303301 + AluSx SINE Alu 1 244 -68 47 19 0 0 chr10 58285996 58286050 -87303238 + AT_rich Low_complexity Low_complexity 1 54 0 397 270 40 20 chr10 58286387 58286535 -87302753 - LTR33 LTR ERVL -1 520 370 189 0 0 0 chr10 58286895 58286916 -87302372 + (A)n Simple_repeat Simple_repeat 1 21 0 4222 122 23 0 chr10 58286919 58287584 -87301704 - L1MA3 LINE L1 -11 6294 5615 273 360 48 16 chr10 58287871 58287996 -87301292 - LTR33 LTR ERVL -319 202 74 1063 240 67 21 chr10 58289049 58289378 -87299910 + MER2 DNA MER2_type 1 344 0 207 0 0 0 chr10 58290140 58290163 -87299125 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 863 227 71 38 chr10 58290184 58290556 -87298732 + LTR40b LTR ERVL 3 462 0 224 77 26 0 chr10 58290900 58290939 -87298349 + (TA)n Simple_repeat Simple_repeat 1 40 0 1658 189 91 43 chr10 58291388 58291946 -87297342 + MER4A LTR ERV1 1 445 -20 307 254 73 18 chr10 58292461 58292571 -87296717 + L1ME3A LINE L1 6042 6157 -13 1810 173 41 25 chr10 58292684 58292973 -87296315 + L1MA8 LINE L1 5842 6142 -149 2112 128 3 0 chr10 58292973 58293277 -87296011 + AluSx SINE Alu 1 305 -7 1810 173 41 25 chr10 58293277 58293426 -87295862 + L1MA8 LINE L1 6142 6287 -4 1401 68 0 0 chr10 58293503 58293680 -87295608 - AluY SINE Alu -2 309 133 21 57 0 0 chr10 58293716 58293751 -87295537 + AT_rich Low_complexity Low_complexity 1 35 0 2107 87 0 3 chr10 58293755 58294042 -87295246 - AluY SINE Alu -23 288 3 183 42 0 0 chr10 58294363 58294387 -87294901 + (CA)n Simple_repeat Simple_repeat 1 24 0 300 326 0 0 chr10 58294614 58294700 -87294588 - L1MC4 LINE L1 -1343 6699 6614 226 136 17 34 chr10 58294772 58294831 -87294457 + (TA)n Simple_repeat Simple_repeat 1 58 0 216 200 0 0 chr10 58294876 58294941 -87294347 + (TA)n Simple_repeat Simple_repeat 1 65 0 187 181 12 36 chr10 58295085 58295168 -87294120 + (TA)n Simple_repeat Simple_repeat 2 82 0 232 171 0 73 chr10 58295219 58295301 -87293987 - L1MC4 LINE L1 -1323 6719 6644 644 310 69 100 chr10 58295311 58295862 -87293426 + L2 LINE L2 2267 2800 -514 234 191 0 44 chr10 58295996 58296064 -87293224 + GA-rich Low_complexity Low_complexity 4 68 0 21 57 0 0 chr10 58298622 58298657 -87290631 + AT_rich Low_complexity Low_complexity 1 35 0 191 246 62 77 chr10 58298667 58298732 -87290556 - L2 LINE L2 -4 3309 3246 556 319 43 0 chr10 58298871 58299078 -87290210 - MIR SINE MIR -12 250 35 210 281 31 0 chr10 58299820 58299884 -87289404 - MIR SINE MIR -102 160 95 242 180 16 0 chr10 58300094 58300155 -87289133 + (TA)n Simple_repeat Simple_repeat 1 62 0 984 181 119 68 chr10 58302452 58302792 -87286496 + MLT1A1 LTR MaLR 2 396 0 672 209 7 7 chr10 58302792 58302940 -87286348 + MLT1A1-int LTR MaLR 1 148 -1587 23 33 0 0 chr10 58303722 58303752 -87285536 + AT_rich Low_complexity Low_complexity 1 30 0 264 242 116 11 chr10 58305375 58305470 -87283818 + MER103 DNA DNA 44 148 -18 22 0 0 0 chr10 58306199 58306221 -87283067 + AT_rich Low_complexity Low_complexity 1 22 0 1933 138 0 17 chr10 58307697 58307994 -87281294 + AluSx SINE Alu 3 294 -18 552 242 24 30 chr10 58309288 58309453 -87279835 - L1MC4 LINE L1 -137 7905 7742 21 57 0 0 chr10 58309468 58309503 -87279785 + AT_rich Low_complexity Low_complexity 1 35 0 24 32 0 0 chr10 58310183 58310214 -87279074 + AT_rich Low_complexity Low_complexity 1 31 0 2595 116 64 0 chr10 58310626 58311050 -87278238 - L1MA3 LINE L1 -2 6303 5853 12328 194 20 17 chr10 58311052 58314438 -87274850 - L1MA3 LINE L1 -522 5783 2387 1586 226 26 6 chr10 58314438 58314788 -87274500 - MLT1A1 LTR MaLR 0 365 9 664 209 0 16 chr10 58314796 58314925 -87274363 + MLT1A1 LTR MaLR 26 152 -213 8388 240 92 33 chr10 58314940 58315790 -87273498 + L1MA4A LINE L1 1 799 -6409 1613 160 137 13 chr10 58315790 58316090 -87273198 - MER1B DNA MER1_type 0 337 1 8388 240 92 33 chr10 58316090 58317340 -87271948 + L1MA4A LINE L1 799 1973 -5235 1918 127 13 7 chr10 58317340 58317639 -87271649 + L1PB2 LINE L1 5851 6151 0 8388 240 92 33 chr10 58317639 58318422 -87270866 + L1MA4A LINE L1 1973 2708 -4500 1975 122 11 0 chr10 58318422 58318701 -87270587 + AluSx SINE Alu 1 282 -30 1047 47 0 35 chr10 58318701 58318870 -87270418 + (GGAA)n Simple_repeat Simple_repeat 3 165 0 8388 240 92 33 chr10 58318870 58319207 -87270081 + L1MA4A LINE L1 2708 3024 -4184 2245 104 3 0 chr10 58319207 58319504 -87269784 + AluSg SINE Alu 6 303 -7 1382 181 28 71 chr10 58319511 58319837 -87269451 + AluSx SINE Alu 1 312 0 8388 240 92 33 chr10 58319837 58320606 -87268682 + L1MA4A LINE L1 3029 3751 -3457 2106 125 3 0 chr10 58320606 58320902 -87268386 + AluSc SINE Alu 1 297 -12 8388 240 92 33 chr10 58320902 58321166 -87268122 + L1MA4A LINE L1 3751 4561 -2647 5605 106 4 6 chr10 58321153 58322432 -87266856 + L1PA10 LINE L1 4753 6032 -136 * 1484 191 7 0 chr10 58322442 58322720 -87266568 + L1MA4A LINE L1 4533 4812 -2396 * 21124 31 1 0 chr10 58322718 58325285 -87264003 - L1PA3 LINE L1 -1706 4440 1873 7892 24 0 0 chr10 58325285 58326978 -87262310 + L1PA3 LINE L1 4447 6141 -14 21 71 0 0 chr10 58326978 58327020 -87262268 + AT_rich Low_complexity Low_complexity 1 42 0 1604 163 21 31 chr10 58327070 58327358 -87261930 + AluSx SINE Alu 3 287 -25 4978 177 23 25 chr10 58327370 58329126 -87260162 + L1MA4A LINE L1 5420 7168 -197 232 304 13 13 chr10 58329130 58329209 -87260079 - MLT1A2 LTR MaLR -140 234 156 1039 169 52 4 chr10 58329209 58329440 -87259848 - L1MA4A LINE L1 0 6303 6062 36 0 0 0 chr10 58329458 58329494 -87259794 + AT_rich Low_complexity Low_complexity 1 36 0 33 0 0 0 chr10 58329708 58329741 -87259547 + AT_rich Low_complexity Low_complexity 1 33 0 29 28 0 0 chr10 58329943 58329979 -87259309 + AT_rich Low_complexity Low_complexity 1 36 0 24 0 0 0 chr10 58330008 58330032 -87259256 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr10 58330231 58330253 -87259035 + AT_rich Low_complexity Low_complexity 1 22 0 483 309 127 43 chr10 58330585 58331168 -87258120 - L2 LINE L2 -1 3312 2677 218 200 0 0 chr10 58331998 58332038 -87257250 + (TAG)n Simple_repeat Simple_repeat 2 41 0 359 281 70 92 chr10 58333105 58333333 -87255955 + MIR SINE MIR 1 223 -39 2669 152 39 0 chr10 58333362 58333829 -87255459 - L1MC1 LINE L1 -16 6317 5833 1840 185 21 0 chr10 58333831 58334161 -87255127 - MLT1A1 LTR MaLR 0 365 29 2833 212 47 22 chr10 58334204 58334229 -87255059 - L1MC1 LINE L1 -475 5858 5835 2065 120 0 3 chr10 58334229 58334530 -87254758 - AluSc SINE Alu -9 300 1 2833 212 47 22 chr10 58334530 58335491 -87253797 - L1MC1 LINE L1 -498 5835 4850 204 289 167 26 chr10 58335770 58335884 -87253404 - MIR SINE MIR -65 197 68 22 0 0 0 chr10 58336267 58336289 -87252999 + AT_rich Low_complexity Low_complexity 1 22 0 188 315 0 19 chr10 58336438 58336492 -87252796 - MIR SINE MIR -5 257 205 22 0 0 0 chr10 58336961 58336983 -87252305 + AT_rich Low_complexity Low_complexity 1 22 0 1604 210 7 0 chr10 58337760 58338070 -87251218 + AluJb SINE Alu 1 312 0 223 171 0 0 chr10 58338921 58338962 -87250326 + T-rich Low_complexity Low_complexity 2 42 0 1861 144 3 7 chr10 58339337 58339676 -87249612 + AluSx SINE Alu 1 338 0 295 342 140 10 chr10 58340070 58340263 -87249025 - L2 LINE L2 -546 2768 2551 1775 172 0 25 chr10 58340430 58340750 -87248538 - AluJb SINE Alu 0 312 1 5053 127 16 51 chr10 58341013 58342287 -87247001 + L1PA13 LINE L1 4908 6139 -24 1079 37 7 0 chr10 58343386 58343522 -87245766 - L1P LINE L1 -1063 5083 4947 6955 47 1 1 chr10 58343522 58344389 -87244899 + L1PA5 LINE L1 5282 6151 -3 271 269 108 8 chr10 58344596 58344726 -87244562 - MIR SINE MIR -36 226 84 1568 162 29 67 chr10 58344764 58345079 -87244209 - AluJb SINE Alu -9 303 1 39 68 0 0 chr10 58345125 58345199 -87244089 + AT_rich Low_complexity Low_complexity 1 74 0 181 390 30 24 chr10 58345749 58345918 -87243370 + MIR3 SINE MIR 38 207 -1 183 42 0 0 chr10 58345920 58345944 -87243344 + (CAAAAA)n Simple_repeat Simple_repeat 4 27 0 316 338 57 13 chr10 58346014 58346171 -87243117 - L3 LINE CR1 -106 1471 1308 2252 167 13 0 chr10 58346224 58346619 -87242669 - L1MA9 LINE L1 -55 6257 5858 336 311 114 14 chr10 58347063 58347247 -87242041 - MIR SINE MIR -26 236 36 402 57 0 0 chr10 58347518 58347571 -87241717 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 533 244 50 94 chr10 58347979 58348159 -87241129 - MIR SINE MIR -51 211 24 2613 166 10 113 chr10 58348159 58348641 -87240647 + LTR9 LTR ERV1 1 531 -81 204 40 0 0 chr10 58348641 58348666 -87240622 + (TC)n Simple_repeat Simple_repeat 2 26 0 2613 166 10 113 chr10 58348666 58348728 -87240560 + LTR9 LTR ERV1 531 465 -147 351 0 0 0 chr10 58348728 58348767 -87240521 + (GA)n Simple_repeat Simple_repeat 1 39 0 2613 166 10 113 chr10 58348767 58348903 -87240385 + LTR9 LTR ERV1 464 612 0 533 244 50 94 chr10 58348903 58348923 -87240365 - MIR SINE MIR -238 24 20 23 0 0 0 chr10 58350096 58350119 -87239169 + AT_rich Low_complexity Low_complexity 1 23 0 2383 170 23 16 chr10 58350246 58350675 -87238613 - MSTB1 LTR MaLR 0 432 1 1902 142 0 32 chr10 58350929 58351238 -87238050 + AluSx SINE Alu 1 299 -13 22 56 0 0 chr10 58351554 58351590 -87237698 + AT_rich Low_complexity Low_complexity 1 36 0 21 107 0 0 chr10 58351706 58351790 -87237498 + AT_rich Low_complexity Low_complexity 1 84 0 1514 183 22 22 chr10 58352172 58352483 -87236805 - MER44D DNA MER2_type -5 604 24 14577 156 23 33 chr10 58352488 58355232 -87234056 - Tigger2 DNA MER2_type 0 2718 2 343 188 43 0 chr10 58356025 58356094 -87233194 - MER63 DNA MER1_type -312 750 679 2150 75 0 14 chr10 58356258 58356536 -87232752 - AluSq SINE Alu -25 288 15 2170 114 0 22 chr10 58357312 58357629 -87231659 - AluSg SINE Alu 0 310 1 1214 258 41 22 chr10 58357724 58358089 -87231199 + MLT1A2 LTR MaLR 1 372 -2 243 295 194 0 chr10 58358634 58358763 -87230525 - MLT1J LTR MaLR -355 156 3 210 303 56 0 chr10 58360100 58360189 -87229099 + MIR SINE MIR 166 259 -3 26 0 0 0 chr10 58361360 58361386 -87227902 + AT_rich Low_complexity Low_complexity 1 26 0 2212 92 3 32 chr10 58361397 58361711 -87227577 + AluSp SINE Alu 4 308 -5 339 254 41 8 chr10 58361846 58361968 -87227320 - L1MC3 LINE L1 0 7785 7660 875 186 16 79 chr10 58361973 58362225 -87227063 + MLT1A1 LTR MaLR 5 240 -125 3398 141 60 21 chr10 58362262 58362894 -87226394 + MER51D LTR ERV1 1 657 0 634 206 15 8 chr10 58362894 58363025 -87226263 + MLT1A1 LTR MaLR 231 362 -3 765 192 58 6 chr10 58363026 58363198 -87226090 - L1MC3 LINE L1 -120 7665 7485 1742 234 30 51 chr10 58363340 58363767 -87225521 + LTR38 LTR ERV1 1 415 -141 2359 76 0 22 chr10 58363767 58364083 -87225205 - AluY SINE Alu -2 309 1 1742 234 30 51 chr10 58364083 58364223 -87225065 + LTR38 LTR ERV1 415 556 0 514 297 55 59 chr10 58364262 58364733 -87224555 + MLT1J LTR MaLR 1 486 -2 247 167 0 0 chr10 58366520 58366556 -87222732 + MER34C LTR ERV1 1 36 -549 * 1307 240 51 73 chr10 58366524 58367057 -87222231 + MER39 LTR ERV1 5 707 0 539 281 113 12 chr10 58368287 58368447 -87220841 + MER5B DNA MER1_type 1 176 -2 323 281 30 2 chr10 58368513 58368603 -87220685 - MER5A DNA MER1_type -77 112 8 687 257 88 0 chr10 58368940 58369111 -87220177 - MER45 DNA AcHobo -853 187 2 557 348 128 49 chr10 58369672 58370474 -87218814 - L2 LINE L2 -463 2851 1986 30 0 0 0 chr10 58370485 58370515 -87218773 + AT_rich Low_complexity Low_complexity 1 30 0 1433 282 64 37 chr10 58370539 58371144 -87218144 + MLT-int LTR MaLR 822 1477 -258 1680 183 35 23 chr10 58371683 58372027 -87217261 + MER7A DNA MER2_type 1 346 0 274 339 106 23 chr10 58372196 58372414 -87216874 - L2 LINE L2 -358 2956 2721 413 201 130 26 chr10 58372641 58372795 -87216493 + MER53 DNA DNA 1 170 -19 1105 295 56 3 chr10 58373128 58373518 -87215770 - L1ME1 LINE L1 -4 6556 6146 3396 262 151 24 chr10 58373658 58375503 -87213785 - L1ME1 LINE L1 -855 5685 3606 498 232 53 33 chr10 58375511 58375662 -87213626 - L1ME1 LINE L1 -4867 1673 1520 25 51 0 0 chr10 58376691 58376730 -87212558 + AT_rich Low_complexity Low_complexity 1 39 0 23 54 0 0 chr10 58376808 58376845 -87212443 + AT_rich Low_complexity Low_complexity 1 37 0 330 290 87 6 chr10 58376952 58377135 -87212153 - L1ME LINE L1 -342 5779 5582 650 351 69 39 chr10 58377351 58377961 -87211327 + L2 LINE L2 798 1425 -1889 844 219 70 163 chr10 58377965 58378395 -87210893 - MLT1A1 LTR MaLR -2 363 5 719 188 16 2 chr10 58378400 58378552 -87210736 - MLT1A1-int LTR MaLR -1 1734 1210 22 0 0 0 chr10 58378979 58379001 -87210287 + AT_rich Low_complexity Low_complexity 1 22 0 240 314 102 25 chr10 58379005 58379123 -87210165 - MIR3 SINE MIR -22 186 60 1218 192 47 115 chr10 58379341 58379457 -87209831 - LTR52 LTR ERVL -6 415 293 2294 112 0 3 chr10 58379457 58379769 -87209519 + AluSx SINE Alu 2 312 0 1218 192 47 115 chr10 58379769 58380095 -87209193 - LTR52 LTR ERVL -128 293 3 2508 334 52 14 chr10 58380991 58382119 -87207169 - L2 LINE L2 -268 3045 1878 211 378 9 9 chr10 58382177 58382288 -87207000 - MIR SINE MIR -124 138 28 514 236 103 55 chr10 58383146 58383311 -87205977 + MER52A LTR ERV1 1 173 -1582 * 4028 158 108 33 chr10 58383298 58384056 -87205232 + MER52A LTR ERV1 620 1434 -321 1036 189 5 5 chr10 58384087 58384293 -87204995 + L1MC1 LINE L1 5945 6150 -183 414 0 0 0 chr10 58384613 58384659 -87204629 + (CA)n Simple_repeat Simple_repeat 2 47 0 507 346 0 13 chr10 58384722 58384881 -87204407 - MIR SINE MIR -105 157 1 434 287 88 56 chr10 58384886 58385137 -87204151 + L2 LINE L2 2832 3090 -223 291 348 30 37 chr10 58385256 58385420 -87203868 - MER5B DNA MER1_type -5 173 11 240 343 6 88 chr10 58385437 58385618 -87203670 + L2 LINE L2 3148 3313 0 423 256 48 16 chr10 58386053 58386178 -87203110 + LTR40a LTR ERVL 1 129 -390 269 238 0 79 chr10 58386734 58386835 -87202453 - HAL1 LINE L1 0 2507 2415 1380 281 129 88 chr10 58387344 58388540 -87200748 - HAL1 LINE L1 -237 2270 966 1941 90 40 75 chr10 58388540 58388862 -87200426 + AluSq SINE Alu 1 311 -2 1380 281 129 88 chr10 58388862 58389551 -87199737 - HAL1 LINE L1 -1541 966 307 342 45 0 0 chr10 58389570 58389614 -87199674 + (CA)n Simple_repeat Simple_repeat 1 44 0 327 340 63 43 chr10 58389625 58389878 -87199410 - HAL1 LINE L1 -2199 308 51 304 294 71 92 chr10 58390014 58390296 -87198992 - L2 LINE L2 -1 3312 3037 195 294 299 0 chr10 58390343 58390530 -87198758 - L2 LINE L2 -352 2962 2720 * 255 308 0 0 chr10 58390529 58390594 -87198694 - L2 LINE L2 0 3313 3249 754 269 101 37 chr10 58390647 58390944 -87198344 - MLT1H LTR MaLR -185 364 49 1148 253 47 29 chr10 58391044 58391427 -87197861 + LTR40b LTR ERVL 71 460 -2 255 395 12 25 chr10 58391585 58391828 -87197460 - MER89-int LTR ERV1 -3258 3543 3304 559 305 92 0 chr10 58394674 58394848 -87194440 + LTR33 LTR ERVL 5 194 -327 279 0 0 0 chr10 58395062 58395093 -87194195 + (CA)n Simple_repeat Simple_repeat 2 32 0 22 56 0 0 chr10 58395368 58395404 -87193884 + AT_rich Low_complexity Low_complexity 1 36 0 23 33 0 0 chr10 58396115 58396145 -87193143 + AT_rich Low_complexity Low_complexity 1 30 0 1441 172 53 58 chr10 58396407 58396784 -87192504 + THE1C LTR MaLR 1 375 0 180 0 0 0 chr10 58397085 58397105 -87192183 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 21 57 0 0 chr10 58398311 58398346 -87190942 + AT_rich Low_complexity Low_complexity 1 35 0 33 73 0 0 chr10 58400471 58400539 -87188749 + AT_rich Low_complexity Low_complexity 1 68 0 25 102 0 0 chr10 58400588 58400676 -87188612 + AT_rich Low_complexity Low_complexity 1 88 0 22 0 0 0 chr10 58400957 58400979 -87188309 + AT_rich Low_complexity Low_complexity 1 22 0 285 236 8 65 chr10 58401078 58401172 -87188116 + CT-rich Low_complexity Low_complexity 4 91 -28 1026 119 0 36 chr10 58401172 58401340 -87187948 - L1PA3 LINE L1 -3 6152 5991 285 236 8 65 chr10 58401340 58401368 -87187920 + CT-rich Low_complexity Low_complexity 91 119 0 39 0 0 0 chr10 58402338 58402377 -87186911 + AT_rich Low_complexity Low_complexity 1 39 0 30 45 0 0 chr10 58402744 58402788 -87186500 + AT_rich Low_complexity Low_complexity 1 44 0 249 108 31 15 chr10 58403495 58403560 -87185728 + GA-rich Low_complexity Low_complexity 1 66 0 27 73 0 0 chr10 58403779 58403834 -87185454 + AT_rich Low_complexity Low_complexity 1 55 0 186 364 41 25 chr10 58404252 58404373 -87184915 - MIR3 SINE MIR -16 192 70 725 313 169 3 chr10 58404647 58405037 -87184251 - L2 LINE L2 -866 2448 1994 2369 97 0 0 chr10 58405057 58405365 -87183923 - AluSg SINE Alu -2 308 1 1271 200 39 49 chr10 58405523 58405828 -87183460 + AluJo SINE Alu 6 307 -5 278 50 25 0 chr10 58405942 58405982 -87183306 + (TTCC)n Simple_repeat Simple_repeat 3 43 0 238 200 75 12 chr10 58406633 58406713 -87182575 - L1MA8 LINE L1 -3 6288 6204 425 208 139 14 chr10 58407683 58407827 -87181461 + LTR50 LTR ERVL 5 166 -629 1559 141 95 46 chr10 58407890 58408237 -87181051 + THE1C LTR MaLR 1 364 -11 521 286 139 17 chr10 58408306 58408544 -87180744 + LTR50 LTR ERVL 360 626 -169 213 39 0 0 chr10 58408545 58408571 -87180717 + (TTA)n Simple_repeat Simple_repeat 3 28 0 365 279 84 26 chr10 58408621 58408775 -87180513 - MIR SINE MIR -57 205 43 728 161 0 0 chr10 58409174 58409292 -87179996 + FLAM_C SINE Alu 1 118 -25 68 82 0 0 chr10 58409292 58409451 -87179837 + AT_rich Low_complexity Low_complexity 1 159 0 318 237 0 65 chr10 58409541 58409634 -87179654 - L1MC4 LINE L1 -1339 6703 6617 298 302 85 16 chr10 58409984 58410113 -87179175 - MIR SINE MIR -3 259 122 21 36 0 0 chr10 58410390 58410418 -87178870 + AT_rich Low_complexity Low_complexity 1 28 0 2118 127 28 25 chr10 58411004 58411366 -87177922 - THE1B LTR MaLR -1 363 1 205 246 82 16 chr10 58411557 58411618 -87177670 - L3 LINE CR1 -93 1484 1420 210 222 0 0 chr10 58412217 58412262 -87177026 + CT-rich Low_complexity Low_complexity 2 46 0 1956 143 7 7 chr10 58412932 58413239 -87176049 + AluSx SINE Alu 1 307 -5 1962 172 3 8 chr10 58413471 58413826 -87175462 - MER41B LTR ERV1 -282 353 1 1529 211 100 39 chr10 58413964 58414404 -87174884 - LTR8A LTR ERV1 -2 725 259 266 188 0 0 chr10 58414528 58414576 -87174712 - MER41A LTR ERV1 0 554 507 * 1862 87 4 0 chr10 58414571 58414824 -87174464 - LTR8A LTR ERV1 -472 255 2 935 228 28 9 chr10 58415672 58415887 -87173401 - MER58A DNA MER1_type -5 219 1 331 333 126 15 chr10 58417641 58417911 -87171377 - L2 LINE L2 0 3313 3014 696 331 75 66 chr10 58417983 58418928 -87170360 - L2 LINE L2 -372 2942 1989 2384 72 10 0 chr10 58419459 58419763 -87169525 - AluSc SINE Alu 0 309 3 1491 202 43 140 chr10 58420685 58421363 -87167925 + LTR9 LTR ERV1 1 612 0 698 325 82 27 chr10 58422150 58423386 -87165902 - L1M4 LINE L1 -2503 3643 2340 721 211 0 0 chr10 58423477 58423610 -87165678 - FLAM_A SINE Alu 0 133 1 555 304 145 0 chr10 58424804 58425018 -87164270 + MIR SINE MIR 18 262 0 1505 151 25 4 chr10 58425287 58425566 -87163722 + L1MA6 LINE L1 6005 6289 -11 323 287 52 37 chr10 58426916 58427052 -87162236 - MIR SINE MIR -55 207 70 335 262 33 49 chr10 58428070 58428192 -87161096 - MER94 DNA DNA -4 130 11 31 26 0 0 chr10 58428402 58428440 -87160848 + AT_rich Low_complexity Low_complexity 1 38 0 324 0 0 0 chr10 58428715 58428751 -87160537 + (CA)n Simple_repeat Simple_repeat 1 36 0 1749 199 29 9 chr10 58429261 58429602 -87159686 - MER7A DNA MER2_type 0 346 1 892 225 78 62 chr10 58429802 58430122 -87159166 + L1ME2 LINE L1 5695 6019 -145 572 204 194 0 chr10 58430122 58430328 -87158960 + MER63 DNA MER1_type 1 246 -684 807 237 31 72 chr10 58430485 58430711 -87158577 + MER63 DNA MER1_type 735 946 -115 2368 56 0 30 chr10 58430711 58431013 -87158275 - AluY SINE Alu -18 293 1 807 237 31 72 chr10 58431013 58431107 -87158181 + MER63 DNA MER1_type 946 1042 -19 258 238 0 16 chr10 58431114 58431177 -87158111 + L1ME3 LINE L1 6022 6083 -79 739 163 202 11 chr10 58431569 58431747 -87157541 + MER41B LTR ERV1 424 635 0 21 36 0 0 chr10 58431991 58432019 -87157269 + AT_rich Low_complexity Low_complexity 1 28 0 37 39 0 0 chr10 58432119 58432170 -87157118 + AT_rich Low_complexity Low_complexity 1 51 0 23 0 0 0 chr10 58432731 58432754 -87156534 + AT_rich Low_complexity Low_complexity 1 23 0 28 0 0 0 chr10 58433122 58433150 -87156138 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr10 58433245 58433274 -87156014 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr10 58433529 58433550 -87155738 + AT_rich Low_complexity Low_complexity 1 21 0 1822 163 0 7 chr10 58434811 58435105 -87154183 - AluJb SINE Alu -10 302 11 23 0 0 0 chr10 58435624 58435647 -87153641 + AT_rich Low_complexity Low_complexity 1 23 0 348 64 0 0 chr10 58437158 58437205 -87152083 + (TG)n Simple_repeat Simple_repeat 2 48 0 690 243 17 17 chr10 58438074 58438247 -87151041 + LTR28 LTR ERV1 1 173 -847 14536 153 21 24 chr10 58438263 58439279 -87150009 + LTR28-int LTR ERV1 1680 2698 -4393 1787 118 8 11 chr10 58439279 58439542 -87149746 + AluSg SINE Alu 49 310 0 14536 153 21 24 chr10 58439542 58440952 -87148336 + LTR28-int LTR ERV1 2698 4098 -2993 5466 135 5 1 chr10 58441098 58441897 -87147391 + LTR28-int LTR ERV1 4750 5551 -1540 5378 107 18 5 chr10 58441889 58442663 -87146625 + LTR28-int LTR ERV1 6308 7091 0 * 560 212 18 174 chr10 58442663 58442945 -87146343 + LTR28 LTR ERV1 1 895 -841 561 242 6 75 chr10 58442956 58443117 -87146171 + MER52A LTR ERV1 1079 1228 -527 242 310 0 0 chr10 58443864 58443922 -87145366 - L2 LINE L2 -1 3271 3214 263 348 77 19 chr10 58444375 58444530 -87144758 - L2 LINE L2 -221 3092 2929 699 286 63 17 chr10 58445770 58446008 -87143280 + MIR SINE MIR 1 249 -13 200 333 50 44 chr10 58446383 58446542 -87142746 - MIR SINE MIR -54 208 49 513 200 124 0 chr10 58446833 58446938 -87142350 + FLAM_A SINE Alu 12 129 -13 28 29 0 0 chr10 58447227 58447262 -87142026 + AT_rich Low_complexity Low_complexity 1 35 0 1142 261 61 17 chr10 58448782 58449257 -87140031 - MER114 LTR ERV -4 644 149 310 283 118 0 chr10 58449281 58449433 -87139855 - MER114 LTR ERV -478 170 1 21 0 0 0 chr10 58449481 58449502 -87139786 + AT_rich Low_complexity Low_complexity 1 21 0 33 56 0 0 chr10 58449762 58449816 -87139472 + AT_rich Low_complexity Low_complexity 1 54 0 318 315 28 39 chr10 58449982 58450163 -87139125 - L1MC4 LINE L1 0 8042 7864 224 333 130 0 chr10 58450398 58450521 -87138767 - L2 LINE L2 -8 3305 3167 231 263 13 0 chr10 58450587 58450663 -87138625 + MER114 LTR ERV 94 170 -478 297 358 18 36 chr10 58450708 58450873 -87138415 - L2 LINE L2 -238 3075 2914 615 263 16 32 chr10 58450993 58451179 -87138109 + MER58C DNA MER1_type 7 189 -26 801 314 16 12 chr10 58451206 58451464 -87137824 - L2 LINE L2 -554 2760 2502 1502 262 62 56 chr10 58453118 58453782 -87135506 + L1ME3 LINE L1 5480 6147 -15 21 0 0 0 chr10 58453955 58453976 -87135312 + AT_rich Low_complexity Low_complexity 1 21 0 189 0 0 0 chr10 58456083 58456104 -87133184 + (TC)n Simple_repeat Simple_repeat 2 22 0 189 196 0 0 chr10 58456106 58456152 -87133136 + (CATATA)n Simple_repeat Simple_repeat 2 47 0 239 225 34 34 chr10 58456160 58456249 -87133039 - L1MC4 LINE L1 -1339 6703 6615 22 56 0 0 chr10 58456959 58456995 -87132293 + AT_rich Low_complexity Low_complexity 1 36 0 191 316 13 72 chr10 58457326 58457478 -87131810 - MIR SINE MIR 0 262 120 533 332 44 26 chr10 58457703 58457929 -87131359 - MIR SINE MIR -25 237 8 702 88 0 0 chr10 58458385 58458487 -87130801 - AluSg/x SINE Alu -12 297 196 2093 103 0 48 chr10 58458597 58458908 -87130380 + AluSg1 SINE Alu 1 296 -13 1401 168 52 142 chr10 58461490 58461718 -87127570 + MSTA LTR MaLR 1 169 -259 2003 83 40 30 chr10 58461718 58462018 -87127270 - AluY SINE Alu -8 303 1 1401 168 52 142 chr10 58462018 58462248 -87127040 + MSTA LTR MaLR 169 418 -10 9046 148 9 29 chr10 58462256 58463866 -87125422 + MSTA-int LTR MaLR 3 1580 0 1433 177 174 10 chr10 58463866 58464177 -87125111 + MSTA LTR MaLR 1 362 -66 493 138 32 8 chr10 58464951 58465074 -87124214 + GA-rich Low_complexity Low_complexity 5 130 0 634 238 122 43 chr10 58467036 58467339 -87121949 - MER46C DNA MER2_type -10 328 2 357 301 22 22 chr10 58468180 58468316 -87120972 + MER91A DNA MER1_type 17 152 -44 181 356 0 41 chr10 58468696 58468769 -87120519 + MIR SINE MIR 29 98 -164 21 0 0 0 chr10 58470227 58470248 -87119040 + AT_rich Low_complexity Low_complexity 1 21 0 33 56 0 0 chr10 58470419 58470473 -87118815 + AT_rich Low_complexity Low_complexity 1 54 0 269 247 26 0 chr10 58471346 58471423 -87117865 + MER116 DNA Mariner 2 80 0 188 0 74 0 chr10 58472047 58472074 -87117214 + (TCTA)n Simple_repeat Simple_repeat 4 32 0 6679 38 0 0 chr10 58472096 58472895 -87116393 + L1PA5 LINE L1 5354 6152 -2 219 244 0 0 chr10 58472985 58473026 -87116262 + (TATG)n Simple_repeat Simple_repeat 4 44 0 186 43 0 0 chr10 58473078 58473101 -87116187 + (CA)n Simple_repeat Simple_repeat 2 24 0 258 136 0 0 chr10 58473613 58473657 -87115631 + (A)n Simple_repeat Simple_repeat 1 44 0 215 125 25 0 chr10 58473776 58473816 -87115472 + GA-rich Low_complexity Low_complexity 2 42 0 425 311 0 66 chr10 58473887 58474070 -87115218 - MIR SINE MIR -64 198 28 211 179 30 0 chr10 58474262 58474329 -87114959 + (TA)n Simple_repeat Simple_repeat 1 69 0 288 77 0 0 chr10 58474362 58474401 -87114887 + (CA)n Simple_repeat Simple_repeat 2 40 0 221 247 12 0 chr10 58474481 58474562 -87114726 + (TA)n Simple_repeat Simple_repeat 1 82 0 624 292 147 78 chr10 58474987 58475423 -87113865 + L2 LINE L2 1294 1801 -1513 2340 83 13 0 chr10 58475423 58475724 -87113564 - AluSp SINE Alu -8 305 1 624 292 147 78 chr10 58475724 58476006 -87113282 + L2 LINE L2 1801 2062 -1252 25 0 0 0 chr10 58476015 58476040 -87113248 + AT_rich Low_complexity Low_complexity 1 25 0 2047 194 37 5 chr10 58476168 58476576 -87112712 - LOR1b LTR ERV1 0 461 41 1162 188 111 19 chr10 58476751 58477012 -87112276 - MER50 LTR ERV1 -38 696 412 14061 62 2 1 chr10 58477303 58479099 -87110189 - L1P LINE L1 -4337 1809 12 7412 31 8 0 chr10 58479101 58480394 -87108894 + L1PA4 LINE L1 4856 6155 0 357 82 0 0 chr10 58482076 58482125 -87107163 + (CA)n Simple_repeat Simple_repeat 1 49 0 30 27 0 0 chr10 58482885 58482922 -87106366 + AT_rich Low_complexity Low_complexity 1 37 0 185 0 40 0 chr10 58483396 58483421 -87105867 + (TTG)n Simple_repeat Simple_repeat 2 27 0 269 224 17 0 chr10 58483531 58483589 -87105699 + MLT1I LTR MaLR 344 402 -7 2634 203 53 58 chr10 58483631 58484351 -87104937 + L1MD2 LINE L1 5618 6333 -26 2399 82 0 0 chr10 58484512 58484815 -87104473 + AluSg SINE Alu 1 303 -7 23 42 0 21 chr10 58484879 58484904 -87104384 + AT_rich Low_complexity Low_complexity 1 26 -21 1479 195 0 33 chr10 58484904 58485206 -87104082 + AluJo SINE Alu 5 296 -16 23 42 0 21 chr10 58485206 58485228 -87104060 + AT_rich Low_complexity Low_complexity 26 47 0 439 273 120 55 chr10 58485845 58486490 -87102798 - L1M4 LINE L1 -895 5251 4555 1571 163 51 0 chr10 58486490 58486766 -87102522 + AluSx SINE Alu 1 290 -22 439 273 120 55 chr10 58486766 58486821 -87102467 - L1M4 LINE L1 -1591 4555 4505 225 178 0 0 chr10 58487114 58487159 -87102129 + (TATATG)n Simple_repeat Simple_repeat 4 48 0 1316 184 98 0 chr10 58487433 58487710 -87101578 - AluJb SINE Alu -8 304 1 300 297 75 49 chr10 58487902 58488249 -87101039 + L1MC4a LINE L1 5542 5897 -224 219 36 0 0 chr10 58490747 58490775 -87098513 + (TG)n Simple_repeat Simple_repeat 2 29 0 188 422 9 9 chr10 58490795 58490904 -87098384 - MER5A DNA MER1_type -27 162 54 25 31 0 0 chr10 58491323 58491355 -87097933 + AT_rich Low_complexity Low_complexity 1 32 0 1470 174 42 45 chr10 58492480 58492791 -87096497 - AluJb SINE Alu -2 310 1 1759 159 0 11 chr10 58493625 58493901 -87095387 + AluJb SINE Alu 1 273 -39 2192 102 10 0 chr10 58494390 58494694 -87094594 + AluSc SINE Alu 3 309 0 856 333 62 65 chr10 58495225 58496046 -87093242 + L2 LINE L2 1989 2807 -507 4512 134 1 0 chr10 58496046 58496694 -87092594 + MER52-int LTR ERV1 4657 5305 -1786 771 155 0 31 chr10 58497049 58497178 -87092110 + AluSq/x SINE Alu 1 125 -188 22 0 0 0 chr10 58498776 58498798 -87090490 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr10 58498837 58498858 -87090430 + AT_rich Low_complexity Low_complexity 1 21 0 450 309 93 44 chr10 58499004 58499994 -87089294 + L1M4 LINE L1 3799 4836 -1310 252 335 38 10 chr10 58500173 58500382 -87088906 + L1M4 LINE L1 5080 5294 -852 1683 116 7 76 chr10 58500612 58500914 -87088374 + MER1B DNA MER1_type 59 339 0 191 36 36 0 chr10 58501223 58501251 -87088037 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 210 143 0 0 chr10 58501558 58501593 -87087695 + (CATA)n Simple_repeat Simple_repeat 4 38 0 213 354 44 44 chr10 58502252 58502410 -87086878 + MIR SINE MIR 9 166 -96 196 273 50 101 chr10 58502505 58502604 -87086684 - L2 LINE L2 -42 3230 3137 220 257 0 0 chr10 58502868 58502885 -87086403 + A-rich Low_complexity Low_complexity 1 17 -53 1731 136 78 17 chr10 58502885 58503179 -87086109 + AluSx SINE Alu 1 312 0 220 257 0 0 chr10 58503179 58503231 -87086057 + A-rich Low_complexity Low_complexity 16 70 0 27 0 0 0 chr10 58504256 58504283 -87085005 + AT_rich Low_complexity Low_complexity 1 27 0 6900 185 27 13 chr10 58504297 58506667 -87082621 - L1PA16 LINE L1 -2 6164 3759 347 307 109 8 chr10 58507247 58507410 -87081878 + MIR SINE MIR 11 191 -71 209 119 24 0 chr10 58508282 58508324 -87080964 + (TAGA)n Simple_repeat Simple_repeat 2 44 0 235 279 0 0 chr10 58508333 58508394 -87080894 + (TATG)n Simple_repeat Simple_repeat 3 63 0 276 244 49 0 chr10 58508396 58508478 -87080810 + CT-rich Low_complexity Low_complexity 3 88 0 1619 143 54 14 chr10 58508479 58508759 -87080529 - LTR1 LTR ERV1 0 785 495 1317 142 50 137 chr10 58508739 58509140 -87080148 - LTR1 LTR ERV1 -412 373 8 * 11495 199 50 55 chr10 58509141 58511535 -87077753 - HUERS-P2 LTR ERV1 0 3088 644 2239 70 0 0 chr10 58511535 58511851 -87077437 + AluY SINE Alu 1 316 0 11495 199 50 55 chr10 58511851 58512489 -87076799 - HUERS-P2 LTR ERV1 -2444 644 5 4005 148 23 73 chr10 58512493 58513318 -87075970 - LTR1 LTR ERV1 -1 784 1 262 167 0 42 chr10 58513318 58513390 -87075898 + CT-rich Low_complexity Low_complexity 1 69 0 277 230 15 37 chr10 58513437 58513572 -87075716 + T-rich Low_complexity Low_complexity 3 134 0 1919 78 0 4 chr10 58515006 58515249 -87074039 - AluSc SINE Alu -65 244 3 309 320 67 7 chr10 58515287 58515437 -87073851 + L1MD2 LINE L1 6184 6342 -17 2798 179 30 7 chr10 58515965 58516864 -87072424 - L1MA3 LINE L1 -620 5685 4767 2739 159 65 51 chr10 58516857 58517462 -87071826 + L1MA3 LINE L1 5693 6305 0 * 21 57 0 0 chr10 58517498 58517533 -87071755 + AT_rich Low_complexity Low_complexity 1 35 0 2553 39 0 10 chr10 58517736 58518045 -87071243 + AluY SINE Alu 1 306 -5 234 341 44 0 chr10 58518658 58518749 -87070539 + MIR3 SINE MIR 66 160 -48 30 69 0 0 chr10 58519281 58519339 -87069949 + AT_rich Low_complexity Low_complexity 1 58 0 2255 97 0 0 chr10 58520250 58520548 -87068740 - AluSx SINE Alu -14 298 1 21 0 0 0 chr10 58521006 58521027 -87068261 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr10 58521289 58521311 -87067977 + AT_rich Low_complexity Low_complexity 1 22 0 1302 156 130 33 chr10 58521493 58521763 -87067525 + AluJb SINE Alu 1 296 -16 32 67 0 0 chr10 58521787 58521847 -87067441 + AT_rich Low_complexity Low_complexity 1 60 0 1225 309 50 36 chr10 58523129 58523714 -87065574 - MLT1E LTR MaLR 0 593 1 21 71 0 0 chr10 58524338 58524380 -87064908 + AT_rich Low_complexity Low_complexity 1 42 0 201 371 19 9 chr10 58524469 58524574 -87064714 + L2 LINE L2 2654 2759 -555 370 306 0 9 chr10 58524894 58525005 -87064283 + LTR67 LTR ERVL 438 547 -10 181 283 9 66 chr10 58526078 58526184 -87063104 - MIR SINE MIR -4 258 159 734 271 29 0 chr10 58527054 58527224 -87062064 + MER45A DNA AcHobo 4 178 0 2060 112 3 34 chr10 58527832 58528154 -87061134 - AluSq SINE Alu -1 312 1 432 337 140 42 chr10 58528810 58529934 -87059354 + L2 LINE L2 1782 3035 -237 30 89 0 0 chr10 58530198 58530277 -87059011 + AT_rich Low_complexity Low_complexity 1 79 0 3825 146 5 64 chr10 58530369 58531103 -87058185 + LTR8 LTR ERV1 1 691 0 265 306 0 0 chr10 58531110 58531195 -87058093 + CT-rich Low_complexity Low_complexity 1 85 0 200 323 16 0 chr10 58531206 58531268 -87058020 + L2 LINE L2 3251 3313 0 22 35 0 0 chr10 58532792 58532821 -87056467 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr10 58532897 58532919 -87056369 + AT_rich Low_complexity Low_complexity 1 22 0 316 244 70 0 chr10 58534093 58534179 -87055109 - L2 LINE L2 -1 3312 3221 238 284 114 0 chr10 58534846 58534934 -87054354 + L2 LINE L2 3216 3313 0 31 0 0 0 chr10 58535625 58535656 -87053632 + AT_rich Low_complexity Low_complexity 1 31 0 2379 200 44 33 chr10 58535979 58536529 -87052759 - L1MB1 LINE L1 -67 6122 5567 227 175 63 0 chr10 58536540 58536603 -87052685 + MER69 DNA AcHobo 2359 2425 -101 328 226 12 30 chr10 58536914 58537078 -87052210 + GA-rich Low_complexity Low_complexity 4 164 0 1408 206 21 94 chr10 58537266 58537693 -87051595 + MSTD LTR MaLR 1 396 0 658 43 32 0 chr10 58538674 58538767 -87050521 - THE1-int LTR MaLR -5 1575 1480 2025 165 48 14 chr10 58539261 58539613 -87049675 - THE1B LTR MaLR 0 364 1 11009 99 5 19 chr10 58539613 58539933 -87049355 - THE1B-int LTR MaLR 0 1580 1257 2061 145 0 0 chr10 58539933 58540243 -87049045 - AluSq SINE Alu 0 313 4 11009 99 5 19 chr10 58540243 58541524 -87047764 - THE1B-int LTR MaLR -323 1257 2 1966 150 51 23 chr10 58541525 58541879 -87047409 - THE1B LTR MaLR 0 364 1 2321 232 47 91 chr10 58543281 58544110 -87045178 - MER21B LTR ERV1 -52 811 19 373 256 0 24 chr10 58544132 58544214 -87045074 - MER21B LTR ERV1 -773 90 11 378 258 71 39 chr10 58544286 58544441 -87044847 - L1ME1 LINE L1 0 6166 6007 358 276 84 88 chr10 58544569 58544830 -87044458 - L2 LINE L2 -2 3311 3052 486 327 15 73 chr10 58545414 58545744 -87043544 + HAL1 LINE L1 589 899 -1608 1842 127 31 0 chr10 58546150 58546441 -87042847 - AluSx SINE Alu -11 301 2 928 215 10 5 chr10 58548330 58548535 -87040753 - L1MD1 LINE L1 -23 6613 6408 2377 239 59 27 chr10 58548538 58549959 -87039329 - L1MD1 LINE L1 -458 6178 4715 1558 238 18 0 chr10 58549971 58550303 -87038985 - MLT2D LTR ERVL -48 366 29 22 0 0 0 chr10 58550318 58550340 -87038948 + AT_rich Low_complexity Low_complexity 1 22 0 3921 179 38 18 chr10 58550340 58551134 -87038154 - ERVL-D LTR ERVL 0 5764 4955 1240 250 55 18 chr10 58551135 58551647 -87037641 - L1MD1 LINE L1 -2661 3879 3349 1326 234 18 79 chr10 58551676 58552117 -87037171 - L1MD1 LINE L1 -6095 445 32 235 336 86 23 chr10 58553247 58553375 -87035913 + MIR SINE MIR 77 212 -50 21 57 0 0 chr10 58553529 58553564 -87035724 + AT_rich Low_complexity Low_complexity 1 35 0 2307 54 3 24 chr10 58554790 58555086 -87034202 + AluY SINE Alu 6 295 -16 280 305 0 0 chr10 58555139 58555221 -87034067 + CT-rich Low_complexity Low_complexity 3 84 0 31 0 0 0 chr10 58555297 58555328 -87033960 + AT_rich Low_complexity Low_complexity 1 31 0 25 51 0 0 chr10 58555386 58555425 -87033863 + AT_rich Low_complexity Low_complexity 1 39 0 1540 201 0 26 chr10 58556797 58557101 -87032187 + AluJo SINE Alu 1 296 -16 316 219 123 52 chr10 58557721 58557876 -87031412 + L2 LINE L2 3133 3298 -15 2717 86 23 15 chr10 58558197 58558592 -87030696 + L1PA7 LINE L1 5754 6151 -3 193 393 47 0 chr10 58558968 58559075 -87030213 + L2 LINE L2 3152 3263 -9 26 30 0 0 chr10 58559876 58559909 -87029379 + AT_rich Low_complexity Low_complexity 1 33 0 2302 88 3 0 chr10 58560186 58560481 -87028807 - AluSp SINE Alu -17 296 1 25 51 0 0 chr10 58560801 58560840 -87028448 + AT_rich Low_complexity Low_complexity 1 39 0 235 347 27 34 chr10 58561554 58561701 -87027587 - MIR SINE MIR -112 150 5 26 0 0 0 chr10 58561711 58561737 -87027551 + AT_rich Low_complexity Low_complexity 1 26 0 260 137 20 0 chr10 58561737 58561788 -87027500 + (TA)n Simple_repeat Simple_repeat 1 52 0 1961 140 0 0 chr10 58563300 58563613 -87025675 + AluSg SINE Alu 1 313 0 25 0 0 0 chr10 58564050 58564075 -87025213 + AT_rich Low_complexity Low_complexity 1 25 0 325 237 79 40 chr10 58564276 58564428 -87024860 + MIR SINE MIR 105 262 0 301 350 49 0 chr10 58564710 58564853 -87024435 + MIR SINE MIR 113 262 0 23 33 0 0 chr10 58564855 58564885 -87024403 + AT_rich Low_complexity Low_complexity 1 30 0 186 43 0 0 chr10 58565786 58565809 -87023479 + (GA)n Simple_repeat Simple_repeat 1 23 0 269 318 68 36 chr10 58566036 58566288 -87023000 + L1MEd LINE L1 934 1193 -4926 286 348 21 69 chr10 58566386 58566615 -87022673 + L1MEd LINE L1 401 602 -5517 255 31 0 0 chr10 58566615 58566647 -87022641 + (CA)n Simple_repeat Simple_repeat 2 33 0 286 348 21 69 chr10 58566647 58566840 -87022448 + L1MEd LINE L1 602 803 -5316 4511 231 48 43 chr10 58567013 58569578 -87019710 + L1PA15 LINE L1 1 2552 -4245 2107 163 22 0 chr10 58569578 58569934 -87019354 + THE1B LTR MaLR 1 364 0 8854 136 62 13 chr10 58569934 58571440 -87017848 + THE1B-int LTR MaLR 1 1580 0 1714 174 38 49 chr10 58571440 58571808 -87017480 + THE1B LTR MaLR 1 364 0 4511 231 48 43 chr10 58571808 58572326 -87016962 + L1PA15 LINE L1 2551 3311 -3486 5247 189 18 18 chr10 58572327 58574126 -87015162 + L1PA15 LINE L1 4833 6816 0 308 335 104 33 chr10 58574231 58574443 -87014845 + L1MEd LINE L1 1026 1252 -4867 225 187 49 106 chr10 58574453 58574576 -87014712 + L1M4 LINE L1 4891 5006 -1140 1607 237 17 8 chr10 58574579 58574937 -87014351 + MLT1A1 LTR MaLR 1 361 -4 230 226 0 32 chr10 58574951 58575013 -87014275 + A-rich Low_complexity Low_complexity 1 60 0 201 176 0 88 chr10 58575734 58575815 -87013473 + (CATATA)n Simple_repeat Simple_repeat 3 77 -8 1735 173 55 0 chr10 58575815 58576145 -87013143 - MER7A DNA MER2_type 0 346 1 201 176 0 88 chr10 58576145 58576154 -87013134 + (CATATA)n Simple_repeat Simple_repeat 77 85 0 1198 218 54 4 chr10 58576154 58576434 -87012854 - MER2 DNA MER2_type -3 342 49 341 22 22 0 chr10 58576478 58576524 -87012764 + (TA)n Simple_repeat Simple_repeat 2 48 0 315 49 0 0 chr10 58576567 58576608 -87012680 + (TG)n Simple_repeat Simple_repeat 1 41 0 714 230 78 0 chr10 58576717 58576921 -87012367 + Charlie1 DNA MER1_type 7 226 -2535 697 133 37 15 chr10 58576918 58577053 -87012235 + Charlie1 DNA MER1_type 2623 2760 -1 * 22 111 0 0 chr10 58577648 58577747 -87011541 + AT_rich Low_complexity Low_complexity 1 99 0 351 65 0 0 chr10 58578403 58578449 -87010839 + (TG)n Simple_repeat Simple_repeat 1 46 0 338 274 41 59 chr10 58579897 58580141 -87009147 + L1MC5 LINE L1 6814 7054 -907 2064 141 39 36 chr10 58580141 58580504 -87008784 + THE1B LTR MaLR 1 364 0 338 274 41 59 chr10 58580504 58580529 -87008759 + L1MC5 LINE L1 7054 7078 -883 354 250 189 79 chr10 58580759 58581187 -87008101 + L1MC5 LINE L1 7246 7720 -241 25 75 0 0 chr10 58581577 58581630 -87007658 + AT_rich Low_complexity Low_complexity 1 53 0 420 20 0 0 chr10 58581786 58581807 -87007481 + (TG)n Simple_repeat Simple_repeat 1 70 0 420 20 0 0 chr10 58581807 58581856 -87007432 + (TG)n Simple_repeat Simple_repeat 2 50 0 2213 99 3 0 chr10 58581879 58582171 -87007117 - AluSp SINE Alu -20 293 1 227 319 0 66 chr10 58583417 58583508 -87005780 - MER5A DNA MER1_type -28 161 77 507 158 0 0 chr10 58583559 58583641 -87005647 - MER20 DNA MER1_type -3 216 135 225 191 24 0 chr10 58583648 58583690 -87005598 + MER34 LTR ERV1 9 51 -491 261 0 0 0 chr10 58583690 58583719 -87005569 + (A)n Simple_repeat Simple_repeat 1 29 0 998 196 77 132 chr10 58583739 58583782 -87005506 + MER39 LTR ERV1 271 315 -392 2031 111 0 0 chr10 58583782 58584089 -87005199 + AluSc SINE Alu 1 307 0 998 196 77 132 chr10 58584089 58584498 -87004790 + MER39 LTR ERV1 315 699 -8 550 231 32 51 chr10 58584490 58584646 -87004642 - MER20 DNA MER1_type -62 157 5 * 413 305 86 27 chr10 58585199 58585386 -87003902 + L3 LINE CR1 554 751 -826 4783 181 26 22 chr10 58585408 58586051 -87003237 + L1MA3 LINE L1 5175 5826 -500 1722 155 3 31 chr10 58586051 58586377 -87002911 + AluSx SINE Alu 1 318 0 4783 181 26 22 chr10 58586377 58586881 -87002407 + L1MA3 LINE L1 5826 6326 0 409 388 57 13 chr10 58586946 58587263 -87002025 + L3 LINE CR1 861 1191 -386 21 0 0 0 chr10 58587330 58587351 -87001937 + AT_rich Low_complexity Low_complexity 1 21 0 360 233 35 23 chr10 58587686 58587858 -87001430 + (TA)n Simple_repeat Simple_repeat 2 175 0 23 0 0 0 chr10 58588273 58588296 -87000992 + AT_rich Low_complexity Low_complexity 1 23 0 323 302 7 36 chr10 58588995 58589134 -87000154 - MIR SINE MIR 0 262 128 1666 126 10 71 chr10 58589139 58589310 -86999978 - AluSc SINE Alu -16 293 148 465 66 0 0 chr10 58589310 58589371 -86999917 + (TA)n Simple_repeat Simple_repeat 1 61 0 1666 126 10 71 chr10 58589371 58589509 -86999779 - AluSc SINE Alu -161 148 3 715 193 0 35 chr10 58590026 58590171 -86999117 - FLAM_A SINE Alu 0 142 3 1919 323 91 13 chr10 58591348 58592435 -86996853 - L2 LINE L2 -12 3301 2128 1769 158 16 3 chr10 58594498 58594801 -86994487 + AluJb SINE Alu 1 307 -5 30 0 0 0 chr10 58594776 58594806 -86994482 + AT_rich Low_complexity Low_complexity 1 30 0 22 35 0 0 chr10 58595308 58595337 -86993951 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr10 58595482 58595505 -86993783 + AT_rich Low_complexity Low_complexity 1 23 0 542 226 65 0 chr10 58595734 58595902 -86993386 - MER3 DNA MER1_type -30 179 1 607 332 158 29 chr10 58596054 58596647 -86992641 - L2 LINE L2 -75 3238 2554 413 211 0 9 chr10 58597773 58597882 -86991406 + (TA)n Simple_repeat Simple_repeat 2 109 0 263 172 0 17 chr10 58598519 58598577 -86990711 + CT-rich Low_complexity Low_complexity 1 57 0 6313 52 15 1 chr10 58599687 58600561 -86988727 + L1P LINE L1 2113 2998 -3148 378 268 116 56 chr10 58600958 58601242 -86988046 - L2 LINE L2 -140 3173 2873 1406 185 32 4 chr10 58601392 58601673 -86987615 - AluJo SINE Alu -10 302 14 26 30 0 0 chr10 58602932 58602965 -86986323 + AT_rich Low_complexity Low_complexity 1 33 0 22 0 0 0 chr10 58602994 58603016 -86986272 + AT_rich Low_complexity Low_complexity 1 22 0 249 346 11 34 chr10 58603645 58603824 -86985464 - L2 LINE L2 -17 3296 3122 568 68 0 0 chr10 58604828 58604902 -86984386 - THE1C LTR MaLR -301 74 1 232 338 46 60 chr10 58605019 58605170 -86984118 + L3 LINE CR1 1308 1456 -121 1143 113 0 13 chr10 58606772 58606931 -86982357 + AluSg/x SINE Alu 133 289 -21 477 266 101 0 chr10 58608005 58608163 -86981125 - MIR SINE MIR 0 262 89 288 269 58 0 chr10 58608235 58608339 -86980949 - MER104 DNA Tc2 -67 113 4 263 344 104 41 chr10 58608397 58608618 -86980670 + L2 LINE L2 1184 1418 -1896 1417 60 0 0 chr10 58608812 58608979 -86980309 + AluY SINE Alu 130 296 -15 202 292 73 25 chr10 58609813 58609939 -86979349 + MIR SINE MIR 76 205 -3 2211 84 9 50 chr10 58611964 58612287 -86977001 + AluSq SINE Alu 1 310 -3 418 312 89 49 chr10 58612977 58613224 -86976064 + L1ME4a LINE L1 5626 5882 -239 235 304 62 62 chr10 58613231 58613343 -86975945 + L2 LINE L2 2766 2877 -437 514 270 230 15 chr10 58613369 58613639 -86975649 + L2 LINE L2 2980 3307 -6 354 23 0 0 chr10 58614431 58614459 -86974829 + (CA)n Simple_repeat Simple_repeat 1 71 0 354 23 0 0 chr10 58614459 58614502 -86974786 + (CA)n Simple_repeat Simple_repeat 2 44 0 545 249 18 18 chr10 58614952 58615117 -86974171 + L1ME LINE L1 5621 5785 -336 1293 236 34 6 chr10 58616109 58616435 -86972853 + MER58B DNA MER1_type 7 341 0 280 244 89 11 chr10 58617196 58617286 -86972002 - HAL1 LINE L1 -2375 132 36 1011 179 73 6 chr10 58617303 58617482 -86971806 + MER8 DNA MER2_type 24 214 -25 477 0 0 0 chr10 58617489 58617542 -86971746 + (TG)n Simple_repeat Simple_repeat 2 54 0 180 0 0 0 chr10 58617556 58617576 -86971712 + (TTTTC)n Simple_repeat Simple_repeat 2 21 0 1049 146 0 19 chr10 58617584 58617742 -86971546 - AluSg/x SINE Alu -37 273 119 2713 136 60 10 chr10 58618679 58619164 -86970124 - Tigger3b DNA MER2_type -722 509 1 545 167 10 0 chr10 58619167 58619269 -86970019 - L1MB5 LINE L1 -54 6120 6018 2200 110 3 0 chr10 58619299 58619591 -86969697 + AluSx SINE Alu 1 293 -19 1066 247 43 39 chr10 58620681 58621274 -86968014 + L1ME3A LINE L1 5316 5905 -265 318 308 90 0 chr10 58621364 58621497 -86967791 + L1ME3A LINE L1 6026 6170 0 808 161 0 0 chr10 58621502 58621620 -86967668 - FLAM_C SINE Alu -15 118 1 326 240 39 78 chr10 58622625 58622779 -86966509 - MIR SINE MIR -20 242 95 1160 176 29 50 chr10 58623013 58623292 -86965996 + MLT1B LTR MaLR 1 273 -117 324 289 26 19 chr10 58624691 58624847 -86964441 + CT-rich Low_complexity Low_complexity 1 157 0 371 298 29 29 chr10 58625845 58626050 -86963238 + MLT1J2 LTR MaLR 1 205 -245 369 264 146 113 chr10 58629121 58629492 -86959796 - L2 LINE L2 -5 3267 2885 24 0 0 0 chr10 58629662 58629686 -86959602 + AT_rich Low_complexity Low_complexity 1 24 0 627 250 43 32 chr10 58629700 58629888 -86959400 + L2 LINE L2 3100 3289 -24 1119 261 100 12 chr10 58630308 58630810 -86958478 + L1PBa LINE L1 6 551 -6312 1073 140 70 0 chr10 58630878 58631078 -86958210 - L1PBa LINE L1 -5890 973 760 1376 221 40 20 chr10 58631095 58631662 -86957626 + L1PBa LINE L1 992 1754 -5109 3340 112 19 8 chr10 58631774 58632366 -86956922 - L1P LINE L1 -2377 3769 3172 1849 259 19 8 chr10 58632379 58632866 -86956422 + L2 LINE L2 1947 2438 -876 399 235 187 6 chr10 58633164 58633330 -86955958 + L2 LINE L2 2639 2834 -480 2256 108 39 33 chr10 58634495 58634857 -86954431 - THE1B LTR MaLR 0 364 1 474 171 9 72 chr10 58635025 58635136 -86954152 - MER94 DNA DNA 0 134 31 34 65 0 0 chr10 58636377 58636439 -86952849 + AT_rich Low_complexity Low_complexity 1 62 0 623 261 48 34 chr10 58638573 58638780 -86950508 - MER63A DNA MER1_type 0 210 1 706 258 84 42 chr10 58639756 58640043 -86949245 - MLT1A2 LTR MaLR -68 306 8 210 169 17 34 chr10 58640295 58640354 -86948934 + A-rich Low_complexity Low_complexity 3 60 0 226 211 70 42 chr10 58640752 58640823 -86948465 - L2 LINE L2 -5 3267 3195 352 319 129 12 chr10 58642237 58642400 -86946888 - MIR3 SINE MIR -11 197 16 1743 177 0 3 chr10 58642433 58642758 -86946530 + AluJo SINE Alu 1 324 0 266 282 0 26 chr10 58642776 58642854 -86946434 + MIR SINE MIR 5 80 -182 271 313 27 67 chr10 58642903 58643053 -86946235 - L2 LINE L2 -212 3060 2917 207 0 0 0 chr10 58643126 58643149 -86946139 + (CA)n Simple_repeat Simple_repeat 1 23 0 312 242 98 23 chr10 58643249 58643381 -86945907 + L1ME4a LINE L1 5979 6120 -1 7898 99 50 19 chr10 58644601 58645881 -86943407 + Tigger1 DNA MER2_type 1100 2418 0 21 0 0 0 chr10 58646125 58646146 -86943142 + AT_rich Low_complexity Low_complexity 1 21 0 7915 70 16 2 chr10 58646986 58648050 -86941238 + L1P LINE L1 3603 4681 -1465 342 192 176 16 chr10 58648050 58648175 -86941113 - L2 LINE L2 -1641 1673 1529 238 289 47 52 chr10 58648227 58648438 -86940850 + L1MC4a LINE L1 5721 5930 -1878 2479 127 3 3 chr10 58648493 58648855 -86940433 + THE1B LTR MaLR 3 364 0 603 195 51 0 chr10 58648862 58648980 -86940308 + MLT1B LTR MaLR 267 390 0 734 180 0 0 chr10 58650879 58651018 -86938270 + L1P LINE L1 1552 1690 -4456 435 208 89 0 chr10 58651306 58651407 -86937881 - L2 LINE L2 -18 3295 3186 36 0 0 0 chr10 58651420 58651456 -86937832 + AT_rich Low_complexity Low_complexity 1 36 0 1749 144 10 46 chr10 58651693 58651998 -86937290 + AluSx SINE Alu 1 294 -18 603 316 139 23 chr10 58652010 58652598 -86936690 - L2 LINE L2 -192 3121 2337 238 323 6 30 chr10 58652768 58652932 -86936356 + GA-rich Low_complexity Low_complexity 3 162 0 558 150 25 8 chr10 58653273 58653393 -86935895 + A-rich Low_complexity Low_complexity 3 124 0 279 133 0 0 chr10 58653420 58653465 -86935823 + (TTCTCC)n Simple_repeat Simple_repeat 6 50 0 360 335 58 19 chr10 58654282 58654458 -86934830 - MIR SINE MIR 0 262 75 8856 116 9 1 chr10 58654458 58655730 -86933558 + HSMAR1 DNA Mariner 5 1286 -1 360 335 58 19 chr10 58655730 58655759 -86933529 - MIR SINE MIR -187 75 49 35 24 0 0 chr10 58657088 58657130 -86932158 + AT_rich Low_complexity Low_complexity 1 42 0 2559 251 56 39 chr10 58657141 58658068 -86931220 - L1MD2 LINE L1 -227 6132 5179 235 277 24 48 chr10 58658152 58658235 -86931053 + MER5A DNA MER1_type 81 161 -28 203 240 0 40 chr10 58658573 58658698 -86930590 + GA-rich Low_complexity Low_complexity 1 120 0 459 347 36 14 chr10 58659013 58659232 -86930056 - MIR SINE MIR -24 238 15 309 343 63 24 chr10 58659796 58660003 -86929285 + MIR SINE MIR 35 249 -13 26 0 0 0 chr10 58660984 58661010 -86928278 + AT_rich Low_complexity Low_complexity 1 26 0 24 0 0 0 chr10 58661237 58661261 -86928027 + AT_rich Low_complexity Low_complexity 1 24 0 1463 213 3 20 chr10 58661268 58661569 -86927719 + AluJo SINE Alu 7 302 -10 2569 180 69 99 chr10 58661796 58662045 -86927243 + L1MA8 LINE L1 5500 5755 -536 225 243 0 40 chr10 58662045 58662119 -86927169 - LTR66 LTR ERVL -146 464 394 2569 180 69 99 chr10 58662119 58662607 -86926681 + L1MA8 LINE L1 5755 6286 -5 1666 288 96 28 chr10 58662669 58663674 -86925614 + L1ME3A LINE L1 5042 6119 -51 208 262 127 56 chr10 58664654 58664780 -86924508 - L2 LINE L2 -4 3268 3134 2080 206 48 122 chr10 58664876 58665218 -86924070 - L1MD2 LINE L1 -78 6281 6024 1280 96 86 41 chr10 58665218 58665438 -86923850 + MER30 DNA MER1_type 1 230 0 2080 206 48 122 chr10 58665438 58665852 -86923436 - L1MD2 LINE L1 -335 6024 5581 422 188 34 60 chr10 58665862 58665961 -86923327 - L1MA8 LINE L1 -140 6151 6054 2100 126 13 51 chr10 58665961 58665975 -86923313 + THE1C LTR MaLR 1 14 -361 1893 133 3 38 chr10 58665975 58666292 -86922996 - AluSq SINE Alu -7 306 1 2100 126 13 51 chr10 58666292 58666667 -86922621 + THE1C LTR MaLR 14 375 0 422 188 34 60 chr10 58666667 58666684 -86922604 - L1MA8 LINE L1 -237 6054 6038 1142 260 63 63 chr10 58666699 58667522 -86921766 - L1MDa LINE L1 -4638 1902 1080 377 294 121 61 chr10 58667525 58667856 -86921432 + MLT1F LTR MaLR 1 403 -164 2145 143 34 14 chr10 58667856 58668213 -86921075 + THE1B LTR MaLR 1 364 0 377 294 121 61 chr10 58668213 58668248 -86921040 + MLT1F LTR MaLR 403 434 -133 28 48 0 0 chr10 58668698 58668740 -86920548 + AT_rich Low_complexity Low_complexity 1 42 0 230 146 0 18 chr10 58669250 58669305 -86919983 + (TG)n Simple_repeat Simple_repeat 2 55 0 967 250 69 16 chr10 58669566 58669659 -86919629 - MER93b LTR ERV1 0 403 316 1491 224 0 0 chr10 58669659 58669971 -86919317 + AluJo SINE Alu 1 312 0 967 250 69 16 chr10 58669971 58670260 -86919028 - MER93b LTR ERV1 -87 316 1 23 33 0 0 chr10 58670625 58670655 -86918633 + AT_rich Low_complexity Low_complexity 1 30 0 207 0 0 0 chr10 58671371 58671394 -86917894 + (A)n Simple_repeat Simple_repeat 1 23 0 619 215 57 23 chr10 58673596 58673773 -86915515 + MER5A DNA MER1_type 7 189 0 1841 136 176 16 chr10 58673779 58673967 -86915321 + MSTA LTR MaLR 1 158 -270 186 43 0 0 chr10 58673967 58673990 -86915298 + (TC)n Simple_repeat Simple_repeat 1 23 0 1841 136 176 16 chr10 58673990 58674170 -86915118 + MSTA LTR MaLR 158 428 0 657 47 0 0 chr10 58676098 58676183 -86913105 - L1P LINE L1 -1064 5082 4998 1890 66 42 0 chr10 58676186 58676485 -86912803 + L1PA7 LINE L1 5867 6176 0 250 196 20 0 chr10 58676810 58676861 -86912427 + MER70B LTR ERVL 454 505 -73 25 65 0 0 chr10 58676984 58677030 -86912258 + AT_rich Low_complexity Low_complexity 1 46 0 210 71 0 0 chr10 58679507 58679535 -86909753 + (A)n Simple_repeat Simple_repeat 1 28 0 25 51 0 0 chr10 58679840 58679879 -86909409 + AT_rich Low_complexity Low_complexity 1 39 0 3323 72 21 6 chr10 58680099 58680574 -86908714 + L1PA7 LINE L1 5670 6151 -3 378 182 27 0 chr10 58681156 58681266 -86908022 + CT-rich Low_complexity Low_complexity 1 113 0 440 308 0 49 chr10 58681902 58682045 -86907243 - MIR SINE MIR -119 143 8 1629 256 66 32 chr10 58682729 58683228 -86906060 + LTR40a LTR ERVL 4 519 0 934 319 87 21 chr10 58683537 58683964 -86905324 + HERVL40 LTR ERVL 927 1381 -4149 331 307 31 53 chr10 58684274 58684502 -86904786 + MLT1K LTR MaLR 365 587 -1 1074 289 86 12 chr10 58684581 58685000 -86904288 + MLT1D LTR MaLR 3 452 -53 1977 231 101 58 chr10 58685107 58685899 -86903389 - LTR1B LTR ERV1 0 826 1 352 310 118 19 chr10 58687606 58687918 -86901370 + MLT1F LTR MaLR 214 537 -5 246 312 0 0 chr10 58688055 58688148 -86901140 + L1MC4 LINE L1 6614 6706 -1336 * 254 289 0 0 chr10 58688081 58688171 -86901117 - L1MC4 LINE L1 -1339 6703 6614 229 215 77 0 chr10 58688152 58688217 -86901071 - L1MCa LINE L1 -4362 2064 1995 * 220 290 0 0 chr10 58688217 58688286 -86901002 + (TA)n Simple_repeat Simple_repeat 1 69 0 23 0 0 0 chr10 58688729 58688752 -86900536 + AT_rich Low_complexity Low_complexity 1 23 0 225 220 55 22 chr10 58688764 58688855 -86900433 + L1M LINE L1 5335 5428 -2380 22 0 0 0 chr10 58692275 58692297 -86896991 + AT_rich Low_complexity Low_complexity 1 22 0 314 187 53 0 chr10 58692302 58692377 -86896911 - L1MC3 LINE L1 -8 7777 7699 2606 165 21 27 chr10 58692392 58692872 -86896416 - Tigger1 DNA MER2_type 0 2418 1942 * 7773 161 59 34 chr10 58692861 58693861 -86895427 - Tigger1 DNA MER2_type -788 1630 577 1933 135 0 4 chr10 58693861 58694142 -86895146 - AluSg SINE Alu -30 280 1 7773 161 59 34 chr10 58694142 58694710 -86894578 - Tigger1 DNA MER2_type -1841 577 24 644 152 129 67 chr10 58694718 58694896 -86894392 - L1MC3 LINE L1 -104 7681 7493 21 95 0 0 chr10 58695055 58695118 -86894170 + AT_rich Low_complexity Low_complexity 1 63 0 260 256 37 0 chr10 58695183 58695265 -86894023 - MIR SINE MIR -6 256 172 357 24 0 0 chr10 58695331 58695373 -86893915 + (TG)n Simple_repeat Simple_repeat 2 43 0 667 299 57 6 chr10 58695531 58695708 -86893580 - MER5A DNA MER1_type -3 186 1 3651 155 12 28 chr10 58695846 58696528 -86892760 + LTR51 LTR ERV1 1 671 0 245 306 0 33 chr10 58696580 58696701 -86892587 + CT-rich Low_complexity Low_complexity 4 120 0 * 249 300 0 0 chr10 58696627 58696707 -86892581 + T-rich Low_complexity Low_complexity 5 84 0 213 39 0 0 chr10 58696799 58696825 -86892463 + (CAAAAA)n Simple_repeat Simple_repeat 3 28 0 267 31 0 0 chr10 58697522 58697554 -86891734 + (TG)n Simple_repeat Simple_repeat 1 32 0 * 357 24 0 0 chr10 58697553 58697595 -86891693 + (GA)n Simple_repeat Simple_repeat 1 42 0 2164 74 7 27 chr10 58699947 58700245 -86889043 - AluSg SINE Alu -18 292 1 546 293 22 36 chr10 58700994 58701216 -86888072 + L2 LINE L2 3094 3312 -1 22 35 0 0 chr10 58701415 58701444 -86887844 + AT_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr10 58701648 58701673 -86887615 + AT_rich Low_complexity Low_complexity 1 25 0 256 272 48 29 chr10 58702694 58702797 -86886491 + MLT1I LTR MaLR 301 405 -4 956 245 115 19 chr10 58702842 58703103 -86886185 - MER82 DNA MER2_type -1 652 367 387 0 0 0 chr10 58703951 58703994 -86885294 + (TG)n Simple_repeat Simple_repeat 2 44 0 4879 168 63 49 chr10 58704588 58706163 -86883125 - L1MA4 LINE L1 -4 6296 4668 27 29 0 0 chr10 58707124 58707158 -86882130 + AT_rich Low_complexity Low_complexity 1 34 0 189 0 0 0 chr10 58707640 58707661 -86881627 + (TA)n Simple_repeat Simple_repeat 1 21 0 2675 311 89 35 chr10 58708041 58709729 -86879559 - L2 LINE L2 -1 3312 1549 216 261 0 0 chr10 58710033 58710079 -86879209 + (CA)n Simple_repeat Simple_repeat 1 46 0 2027 128 3 0 chr10 58710538 58710836 -86878452 - AluSg SINE Alu -7 303 5 248 261 117 39 chr10 58710839 58711019 -86878269 + L1 LINE L1 3648 3841 -2305 1523 337 113 6 chr10 58711112 58711917 -86877371 + L2 LINE L2 1812 2702 -612 329 288 27 0 chr10 58712331 58712442 -86876846 + MIR SINE MIR 148 261 -1 183 80 0 0 chr10 58712446 58712471 -86876817 + (TTA)n Simple_repeat Simple_repeat 3 27 0 181 308 0 0 chr10 58713541 58713593 -86875695 + MIR SINE MIR 89 140 -122 248 174 14 43 chr10 58714244 58714313 -86874975 + (TAGA)n Simple_repeat Simple_repeat 2 68 0 369 0 0 0 chr10 58715236 58715277 -86874011 + (CA)n Simple_repeat Simple_repeat 1 41 0 21 36 0 0 chr10 58715502 58715530 -86873758 + AT_rich Low_complexity Low_complexity 1 28 0 248 321 107 9 chr10 58715582 58715694 -86873594 - L2 LINE L2 0 3313 3191 27 49 0 0 chr10 58715694 58715735 -86873553 + AT_rich Low_complexity Low_complexity 1 41 0 23 33 0 0 chr10 58716471 58716501 -86872787 + AT_rich Low_complexity Low_complexity 1 30 0 226 319 80 9 chr10 58716649 58716762 -86872526 + L1MC/D LINE L1 5518 5638 -2170 * 3243 199 53 30 chr10 58716750 58717127 -86872161 - L1MA4 LINE L1 -1514 4632 4265 404 19 19 0 chr10 58717127 58717180 -86872108 + (TG)n Simple_repeat Simple_repeat 2 55 0 3243 199 53 30 chr10 58717180 58717615 -86871673 - L1MA4 LINE L1 -1881 4265 3801 378 42 0 0 chr10 58718388 58718436 -86870852 + (CAAA)n Simple_repeat Simple_repeat 1 48 0 585 197 101 40 chr10 58719396 58719626 -86869662 + MER58 DNA MER1_type 49 2385 -35 574 265 72 24 chr10 58719908 58720157 -86869131 + HAL1 LINE L1 1506 1766 -741 373 241 17 35 chr10 58722069 58722185 -86867103 + MER58B DNA MER1_type 194 307 -34 790 224 52 56 chr10 58722506 58722738 -86866550 + MER58B DNA MER1_type 110 340 -1 21 0 0 0 chr10 58723006 58723027 -86866261 + AT_rich Low_complexity Low_complexity 1 21 0 32 106 0 0 chr10 58723624 58723747 -86865541 + AT_rich Low_complexity Low_complexity 1 123 0 233 163 20 0 chr10 58723759 58723808 -86865480 + (TA)n Simple_repeat Simple_repeat 2 51 0 925 228 42 8 chr10 58724312 58724553 -86864735 - L1MB7 LINE L1 -8 6176 5928 919 322 129 30 chr10 58726741 58727300 -86861988 + Zaphod DNA AcHobo 2 615 -3416 762 261 131 4 chr10 58727356 58727808 -86861480 + Zaphod DNA AcHobo 3162 3670 -361 1307 228 99 109 chr10 58728556 58729508 -86859780 - LTR1B LTR ERV1 -1 1019 1 29 47 0 0 chr10 58730136 58730179 -86859109 + AT_rich Low_complexity Low_complexity 1 43 0 1350 281 57 69 chr10 58730346 58730923 -86858365 - L1MEc LINE L1 -3344 2871 2289 225 0 0 0 chr10 58730923 58730948 -86858340 + (TCTA)n Simple_repeat Simple_repeat 2 26 0 1350 281 57 69 chr10 58730948 58731890 -86857398 - L1MEc LINE L1 -3926 2289 1429 28 48 0 0 chr10 58732161 58732203 -86857085 + AT_rich Low_complexity Low_complexity 1 42 0 1197 186 0 5 chr10 58732450 58732660 -86856628 + AluJb SINE Alu 87 295 -17 801 323 87 26 chr10 58734357 58734439 -86854849 - L2 LINE L2 -157 3156 3080 288 0 0 0 chr10 58734439 58734471 -86854817 + (CA)n Simple_repeat Simple_repeat 2 33 0 801 323 87 26 chr10 58734471 58734998 -86854290 - L2 LINE L2 -233 3080 2480 514 167 0 0 chr10 58735009 58735093 -86854195 + L1PA15 LINE L1 5526 5609 -556 1151 72 33 0 chr10 58735093 58735133 -86854155 - AluY SINE Alu -138 173 136 180 0 0 0 chr10 58735133 58735153 -86854135 + (TA)n Simple_repeat Simple_repeat 2 21 0 1151 72 33 0 chr10 58735153 58735265 -86854023 - AluY SINE Alu -175 136 16 738 96 0 0 chr10 58735273 58735377 -86853911 + AluY SINE Alu 175 278 -33 306 0 0 0 chr10 58735383 58735417 -86853871 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 3137 139 56 4 chr10 58735417 58735948 -86853340 + L1PA15 LINE L1 5603 6164 -1 722 322 86 41 chr10 58735965 58736425 -86852863 - L1M4 LINE L1 -950 5196 4695 2042 49 94 11 chr10 58736425 58736712 -86852576 - AluY SINE Alu 0 311 1 722 322 86 41 chr10 58736712 58736916 -86852372 - L1M4 LINE L1 -1451 4695 4502 2229 100 3 0 chr10 58736968 58737259 -86852029 - AluSg SINE Alu -18 292 1 21 0 0 0 chr10 58737969 58737990 -86851298 + AT_rich Low_complexity Low_complexity 1 21 0 211 155 0 69 chr10 58738837 58738895 -86850393 + T-rich Low_complexity Low_complexity 3 56 0 2225 88 10 0 chr10 58740184 58740491 -86848797 - AluSp SINE Alu -3 310 1 180 77 0 0 chr10 58740527 58740553 -86848735 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 207 0 0 0 chr10 58740559 58740582 -86848706 + (CA)n Simple_repeat Simple_repeat 2 24 0 33 25 0 0 chr10 58741217 58741257 -86848031 + AT_rich Low_complexity Low_complexity 1 40 0 1923 102 0 19 chr10 58741257 58741522 -86847766 - AluY SINE Alu -14 297 38 453 122 0 49 chr10 58741920 58742002 -86847286 + MADE1 DNA Mariner 3 80 0 1995 163 79 21 chr10 58742987 58743075 -86846213 + MER65C LTR ERV1 1 83 -378 1884 168 30 28 chr10 58743075 58743438 -86845850 - THE1B LTR MaLR 0 364 1 1995 163 79 21 chr10 58743438 58743767 -86845521 + MER65C LTR ERV1 83 442 -19 859 244 150 25 chr10 58744061 58744508 -86844780 + MLT1D LTR MaLR 1 503 -2 331 21 42 0 chr10 58744813 58744861 -86844427 + (TA)n Simple_repeat Simple_repeat 1 50 0 6693 73 2 3 chr10 58745389 58746652 -86842636 + L1PA7 LINE L1 4883 6154 0 22 56 0 0 chr10 58746671 58746707 -86842581 + AT_rich Low_complexity Low_complexity 1 36 0 328 264 108 16 chr10 58747724 58747853 -86841435 + MIR SINE MIR 17 157 -105 434 311 48 99 chr10 58748199 58748886 -86840402 + HAL1 LINE L1 414 1186 -1321 300 336 29 29 chr10 58749031 58749171 -86840117 + MLT1H LTR MaLR 168 307 -242 436 309 32 62 chr10 58749327 58749828 -86839460 + HAL1 LINE L1 1246 1731 -776 23 0 0 0 chr10 58750108 58750131 -86839157 + AT_rich Low_complexity Low_complexity 1 23 0 241 295 163 52 chr10 58750172 58750460 -86838828 + HAL1 LINE L1 2182 2501 -6 270 0 0 0 chr10 58753314 58753344 -86835944 + (TA)n Simple_repeat Simple_repeat 1 30 0 180 382 15 0 chr10 58753455 58753523 -86835765 - MIR SINE MIR -192 70 2 2277 103 0 0 chr10 58753575 58753885 -86835403 + AluY SINE Alu 1 310 -1 191 273 61 50 chr10 58754186 58754285 -86835003 - L3 LINE CR1 -1300 277 178 269 326 26 72 chr10 58755039 58755404 -86833884 - L1ME LINE L1 -388 5774 5440 1610 155 33 33 chr10 58755404 58755708 -86833580 + AluSx SINE Alu 1 304 -8 269 326 26 72 chr10 58755708 58755881 -86833407 - L1ME LINE L1 -722 5440 5261 993 343 61 46 chr10 58756227 58757354 -86831934 + HERVL LTR ERVL 3364 4507 -1147 23 0 0 0 chr10 58757407 58757430 -86831858 + AT_rich Low_complexity Low_complexity 1 23 0 371 259 129 26 chr10 58757727 58757920 -86831368 - L1ME3A LINE L1 -8 6162 5950 21 0 0 0 chr10 58758098 58758119 -86831169 + AT_rich Low_complexity Low_complexity 1 21 0 271 286 46 22 chr10 58759277 58759391 -86829897 - MER5B DNA MER1_type -1 177 72 468 296 80 12 chr10 58761321 58761412 -86827876 + MLT1G LTR MaLR 411 494 -96 399 21 0 0 chr10 58761412 58761460 -86827828 + (CA)n Simple_repeat Simple_repeat 1 48 0 468 296 80 12 chr10 58761460 58761530 -86827758 + MLT1G LTR MaLR 494 583 -7 395 322 89 44 chr10 58764606 58764966 -86824322 + L1ME4a LINE L1 5688 6063 -58 21 0 0 0 chr10 58765691 58765712 -86823576 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr10 58766255 58766283 -86823005 + AT_rich Low_complexity Low_complexity 1 28 0 447 371 20 16 chr10 58766761 58767014 -86822274 + MIR SINE MIR 3 256 -6 1640 187 80 15 chr10 58767561 58767700 -86821588 - L1MC3 LINE L1 -28 7757 7628 843 280 4 13 chr10 58767700 58767939 -86821349 - MER8 DNA MER2_type 0 239 3 1640 187 80 15 chr10 58767939 58768201 -86821087 - L1MC3 LINE L1 -157 7628 7330 193 262 79 98 chr10 58768369 58768533 -86820755 - MIR SINE MIR -42 220 60 379 128 13 13 chr10 58770036 58770114 -86819174 + (TA)n Simple_repeat Simple_repeat 1 78 0 226 209 0 0 chr10 58770676 58770719 -86818569 + (CA)n Simple_repeat Simple_repeat 1 43 0 2000 125 0 26 chr10 58771177 58771481 -86817807 - AluSx SINE Alu -16 296 1 1096 82 0 0 chr10 58771481 58771616 -86817672 - AluSq/x SINE Alu -178 135 1 22 0 0 0 chr10 58772038 58772060 -86817228 + AT_rich Low_complexity Low_complexity 1 22 0 26 30 0 0 chr10 58772347 58772380 -86816908 + AT_rich Low_complexity Low_complexity 1 33 0 850 291 39 34 chr10 58772708 58773093 -86816195 - LTR16B LTR ERVL -11 453 67 184 360 89 61 chr10 58773163 58773410 -86815878 - L2 LINE L2 -87 3185 2932 667 303 31 42 chr10 58773508 58773769 -86815519 + MLT1H1 LTR MaLR 9 266 -289 192 40 0 0 chr10 58773792 58773817 -86815471 + (TG)n Simple_repeat Simple_repeat 1 25 0 372 59 0 0 chr10 58773817 58773868 -86815420 + (GA)n Simple_repeat Simple_repeat 2 52 0 544 294 42 53 chr10 58773968 58774300 -86814988 - MLT1E1 LTR MaLR -94 499 209 231 315 0 0 chr10 58774377 58774431 -86814857 - MLT1E1 LTR MaLR -570 54 1 28 48 0 0 chr10 58775534 58775576 -86813712 + AT_rich Low_complexity Low_complexity 1 42 0 1555 195 17 17 chr10 58775729 58776021 -86813267 + AluJo SINE Alu 1 292 -20 21 0 0 0 chr10 58776074 58776095 -86813193 + AT_rich Low_complexity Low_complexity 1 21 0 453 294 64 17 chr10 58776424 58776659 -86812629 - L1MC4 LINE L1 -1339 6703 6458 28 48 0 0 chr10 58776668 58776710 -86812578 + AT_rich Low_complexity Low_complexity 1 42 0 2328 224 52 19 chr10 58776966 58778343 -86810945 - L1MB8 LINE L1 -9 6980 5495 437 270 119 13 chr10 58778417 58778915 -86810373 + L1M4c LINE L1 2059 2610 -3772 712 274 34 26 chr10 58778920 58779154 -86810134 + L1M4c LINE L1 2760 2995 -3387 1650 287 79 19 chr10 58779289 58779593 -86809695 - L1MB8 LINE L1 -4551 2408 2124 1463 208 49 0 chr10 58779593 58779881 -86809407 - AluJb SINE Alu -6 306 5 1650 287 79 19 chr10 58779881 58780691 -86808597 - L1MB8 LINE L1 -4835 2124 1193 192 77 0 0 chr10 58780914 58780940 -86808348 + (T)n Simple_repeat Simple_repeat 1 26 0 295 259 80 9 chr10 58781308 58781420 -86807868 - L1MB8 LINE L1 -5929 930 811 1494 330 70 27 chr10 58781553 58782228 -86807060 - L1MB8 LINE L1 -6086 773 70 334 321 56 5 chr10 58782284 58782499 -86806789 - L1MEc LINE L1 -4893 1670 1297 511 348 35 48 chr10 58782559 58783157 -86806131 - L1MEc LINE L1 -5696 867 278 25 31 0 0 chr10 58784148 58784180 -86805108 + AT_rich Low_complexity Low_complexity 1 32 0 603 211 8 15 chr10 58786582 58786715 -86802573 + FLAM_C SINE Alu 2 133 0 22 80 0 0 chr10 58786898 58786948 -86802340 + AT_rich Low_complexity Low_complexity 1 50 0 1342 260 33 38 chr10 58787157 58787549 -86801739 - MER68 LTR ERV1 -7 555 166 847 137 7 7 chr10 58787549 58787688 -86801600 - L1M2 LINE L1 -608 5692 5554 * 4247 197 31 15 chr10 58787678 58787983 -86801305 - L1M2 LINE L1 -592 5708 5409 928 70 78 0 chr10 58787983 58788111 -86801177 + MER85 DNA T2_type 1 138 -1 4247 197 31 15 chr10 58788111 58789047 -86800241 - L1M2 LINE L1 -891 5409 4439 2948 108 32 2 chr10 58789081 58789546 -86799742 - L1PA13 LINE L1 -5 6158 5680 1070 147 0 0 chr10 58789554 58789710 -86799578 - AluSg/x SINE Alu -13 297 142 2400 151 79 26 chr10 58789711 58790439 -86798849 - L1PA13 LINE L1 -475 5688 4913 * 13498 186 11 5 chr10 58790434 58793066 -86796222 + L1P LINE L1 1516 4161 -1985 935 127 0 6 chr10 58793166 58793331 -86795957 + (TTCC)n Simple_repeat Simple_repeat 2 165 0 228 111 0 0 chr10 58793557 58793593 -86795695 + (CAT)n Simple_repeat Simple_repeat 2 37 0 27 29 0 0 chr10 58793651 58793685 -86795603 + AT_rich Low_complexity Low_complexity 1 34 0 604 343 33 4 chr10 58794055 58794297 -86794991 - MIR SINE MIR -10 252 4 23 0 0 0 chr10 58795768 58795791 -86793497 + AT_rich Low_complexity Low_complexity 1 23 0 317 187 39 32 chr10 58796352 58796507 -86792781 + (TATATG)n Simple_repeat Simple_repeat 1 156 0 203 212 10 30 chr10 58796574 58796673 -86792615 + (TA)n Simple_repeat Simple_repeat 1 97 0 353 282 0 6 chr10 58796728 58796909 -86792379 + (TA)n Simple_repeat Simple_repeat 1 180 0 198 322 0 0 chr10 58796943 58797117 -86792171 + (CATA)n Simple_repeat Simple_repeat 3 176 0 328 333 0 0 chr10 58797117 58797222 -86792066 + (TATG)n Simple_repeat Simple_repeat 2 106 0 297 298 0 0 chr10 58797223 58797401 -86791887 + (TA)n Simple_repeat Simple_repeat 1 178 0 2150 105 3 0 chr10 58798149 58798444 -86790844 + AluSg SINE Alu 1 296 -14 276 53 0 0 chr10 58798444 58798482 -86790806 + (CATA)n Simple_repeat Simple_repeat 3 40 0 26 30 0 0 chr10 58798891 58798924 -86790364 + AT_rich Low_complexity Low_complexity 1 33 0 23 33 0 0 chr10 58799886 58799916 -86789372 + AT_rich Low_complexity Low_complexity 1 30 0 783 251 14 0 chr10 58800087 58800310 -86788978 + LTR37B LTR ERV1 1 226 -242 609 267 32 24 chr10 58800458 58800709 -86788579 + LTR37B LTR ERV1 211 463 -5 5800 184 24 9 chr10 58800710 58802812 -86786476 - L1PA16 LINE L1 -19 6147 3981 406 281 79 0 chr10 58803346 58803460 -86785828 + L2 LINE L2 3149 3271 -1 211 292 34 11 chr10 58803576 58803665 -86785623 + MIR SINE MIR 51 141 -121 23 68 0 0 chr10 58803749 58803793 -86785495 + AT_rich Low_complexity Low_complexity 1 44 0 198 366 119 10 chr10 58804380 58804481 -86784807 - MER5B DNA MER1_type -65 113 2 207 0 0 0 chr10 58804849 58804872 -86784416 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 410 307 0 0 chr10 58804875 58804989 -86784299 + MER63A DNA MER1_type 53 166 -44 22 70 0 0 chr10 58805090 58805133 -86784155 + AT_rich Low_complexity Low_complexity 1 43 0 364 196 58 58 chr10 58805449 58805587 -86783701 - LTR52 LTR ERVL -45 376 239 238 65 22 0 chr10 58806103 58806149 -86783139 - LTR66 LTR ERVL -175 435 389 204 135 0 0 chr10 58806155 58806192 -86783096 + (TA)n Simple_repeat Simple_repeat 1 37 0 1341 206 64 18 chr10 58806368 58806479 -86782809 + AluJo SINE Alu 3 107 -205 7342 37 1 0 chr10 58806479 58807675 -86781613 + L1PA4 LINE L1 4979 6175 0 1341 206 64 18 chr10 58807675 58807844 -86781444 + AluJo SINE Alu 107 297 -15 27 49 0 0 chr10 58808033 58808074 -86781214 + AT_rich Low_complexity Low_complexity 1 41 0 1823 194 97 21 chr10 58808276 58808710 -86780578 + MLT1C LTR MaLR 1 467 0 209 316 96 45 chr10 58811078 58811255 -86778033 - L2 LINE L2 -9 3304 3119 524 216 108 0 chr10 58811273 58811458 -86777830 - MER33 DNA MER1_type -9 354 150 327 214 36 12 chr10 58811440 58811524 -86777764 - MER33 DNA MER1_type -230 94 9 * 862 181 13 0 chr10 58812111 58812334 -86776954 + ALR/Alpha Satellite centromeric 1 225 -13 1016 174 12 0 chr10 58812347 58813009 -86776279 + ALR/Alpha Satellite centromeric 1 669 -13 1126 166 8 0 chr10 58813022 58815044 -86774244 + ALR/Alpha Satellite centromeric 1 2037 -13 1114 151 5 0 chr10 58815057 58815606 -86773682 + ALR/Alpha Satellite centromeric 1 551 -48 675 186 0 0 chr10 58815709 58815827 -86773461 + L1P LINE L1 4160 4277 -1869 1146 199 11 4 chr10 58815828 58816090 -86773198 + L1P LINE L1 4448 4711 -1435 * 6346 231 48 28 chr10 58816089 58818175 -86771113 - L1 LINE L1 -1716 4430 2156 317 361 16 0 chr10 58818228 58818350 -86770938 - L2 LINE L2 0 3313 3190 419 241 177 7 chr10 58819885 58820026 -86769262 - L2 LINE L2 -9 3304 3140 1640 169 90 3 chr10 58820223 58820555 -86768733 - MER46B DNA MER2_type 0 236 1 1410 158 62 8 chr10 58820713 58820973 -86768315 + MSTB1 LTR MaLR 1 274 -158 244 62 0 0 chr10 58820969 58821001 -86768287 + MSTB1 LTR MaLR 400 431 -1 * 275 336 45 30 chr10 58821010 58821144 -86768144 - L2 LINE L2 -232 3081 2946 187 250 0 0 chr10 58821121 58821157 -86768131 - L2 LINE L2 -779 2535 2500 * 206 231 0 0 chr10 58821161 58821200 -86768088 - L2 LINE L2 -774 2540 2502 300 353 58 43 chr10 58821958 58822216 -86767072 + MIR SINE MIR 1 262 0 2292 59 0 0 chr10 58823175 58823465 -86765823 + AluY SINE Alu 12 301 -10 198 0 0 0 chr10 58823544 58823566 -86765722 + (A)n Simple_repeat Simple_repeat 1 22 0 21 0 0 0 chr10 58823752 58823773 -86765515 + AT_rich Low_complexity Low_complexity 1 21 0 550 312 69 16 chr10 58823800 58824047 -86765241 - LTR16C LTR ERVL 0 491 232 352 143 0 0 chr10 58824377 58824433 -86764855 + AluS SINE Alu 47 102 -201 3043 174 14 10 chr10 58824871 58825451 -86763837 + L1MC1 LINE L1 5656 6237 -96 183 129 0 0 chr10 58825768 58825799 -86763489 + (CATA)n Simple_repeat Simple_repeat 2 32 0 2253 90 0 6 chr10 58827180 58827491 -86761797 - AluY SINE Alu -2 309 1 180 0 0 0 chr10 58827781 58827801 -86761487 + (A)n Simple_repeat Simple_repeat 1 20 0 401 300 112 12 chr10 58828588 58828758 -86760530 + MIR SINE MIR 76 262 0 228 323 76 32 chr10 58829031 58829189 -86760099 + L2 LINE L2 3144 3308 -5 329 262 262 7 chr10 58829602 58829743 -86759545 - MER5B DNA MER1_type -1 177 1 763 187 18 41 chr10 58829897 58830068 -86759220 + MLT2D LTR ERVL 219 385 -29 186 156 0 0 chr10 58830227 58830272 -86759016 + T-rich Low_complexity Low_complexity 1 45 0 243 170 0 0 chr10 58830438 58830485 -86758803 + (CATATA)n Simple_repeat Simple_repeat 1 47 0 332 212 0 0 chr10 58830485 58830551 -86758737 - L1MC4 LINE L1 -1339 6703 6638 1405 27 0 22 chr10 58831077 58831110 -86758178 + (TTTC)n Simple_repeat Simple_repeat 1 212 0 1405 27 0 22 chr10 58831110 58831294 -86757994 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 29 0 0 0 chr10 58831341 58831370 -86757918 + AT_rich Low_complexity Low_complexity 1 29 0 1069 216 4 50 chr10 58831551 58831810 -86757478 - AluJb SINE Alu -65 247 1 240 282 78 10 chr10 58833681 58833784 -86755504 + L1MC5 LINE L1 7277 7386 -575 2066 279 83 25 chr10 58833804 58834749 -86754539 + L1MEc LINE L1 212 1327 -5236 270 144 52 31 chr10 58834890 58834987 -86754301 + (TAA)n Simple_repeat Simple_repeat 3 101 0 23 68 0 0 chr10 58835259 58835303 -86753985 + AT_rich Low_complexity Low_complexity 1 44 0 200 242 63 95 chr10 58836310 58836405 -86752883 + L2 LINE L2 3180 3271 -1 295 221 125 125 chr10 58839090 58839298 -86749990 - MER57A LTR ERV1 -195 208 1 219 241 165 45 chr10 58839961 58840094 -86749194 - MIR SINE MIR -110 152 4 233 238 12 0 chr10 58840177 58840257 -86749031 + (TA)n Simple_repeat Simple_repeat 2 82 0 2291 78 13 26 chr10 58840373 58840679 -86748609 - AluY SINE Alu -9 302 1 27 49 0 0 chr10 58842121 58842162 -86747126 + AT_rich Low_complexity Low_complexity 1 41 0 1662 259 34 16 chr10 58842757 58843495 -86745793 + L1MEc LINE L1 2121 2876 -3506 1901 209 32 10 chr10 58843503 58843762 -86745526 + L1MA9 LINE L1 5383 5656 -656 990 220 99 41 chr10 58843762 58844107 -86745181 + MER47A DNA MER2_type 1 365 -1 1901 209 32 10 chr10 58844107 58844253 -86745035 + L1MA9 LINE L1 5656 5797 -515 249 250 0 0 chr10 58844257 58844313 -86744975 + MER47A DNA MER2_type 298 353 -13 360 219 49 24 chr10 58844346 58844428 -86744860 - MER47A DNA MER2_type -282 84 1 477 204 0 11 chr10 58844439 58844527 -86744761 + MER47A DNA MER2_type 280 366 0 2110 149 120 44 chr10 58844539 58845014 -86744274 + L1MA9 LINE L1 5799 6309 -3 269 169 0 31 chr10 58845261 58845326 -86743962 + (CATATA)n Simple_repeat Simple_repeat 6 68 0 543 211 35 0 chr10 58845462 58845633 -86743655 + (TA)n Simple_repeat Simple_repeat 2 178 0 303 234 11 64 chr10 58845688 58845782 -86743506 + L1MC4 LINE L1 6615 6703 -1339 201 232 98 24 chr10 58845842 58845924 -86743364 - MIR SINE MIR -101 161 74 2742 197 23 41 chr10 58846174 58846562 -86742726 - L1MD1 LINE L1 -14 6228 5834 3791 87 30 23 chr10 58846562 58846696 -86742592 - LTR19B LTR ERV1 0 580 448 2100 120 3 7 chr10 58846696 58847005 -86742283 - AluSg SINE Alu -2 308 1 3791 87 30 23 chr10 58847005 58847444 -86741844 - LTR19B LTR ERV1 -132 448 3 2742 197 23 41 chr10 58847444 58847469 -86741819 - L1MD1 LINE L1 -408 5834 5810 1993 190 83 33 chr10 58847469 58847986 -86741302 - MER67A LTR ERV1 0 543 1 2742 197 23 41 chr10 58847986 58848225 -86741063 - L1MD1 LINE L1 -432 5810 5587 1902 171 33 28 chr10 58849370 58849732 -86739556 - THE1B LTR MaLR 0 364 1 2030 219 95 15 chr10 58850099 58850513 -86738775 - Charlie1 DNA MER1_type -2 2759 2379 3393 171 46 3 chr10 58850513 58850538 -86738750 + MER39B LTR ERV1 1 23 -630 2102 103 38 0 chr10 58850538 58850828 -86738460 + AluSx SINE Alu 1 301 -11 201 39 0 0 chr10 58850828 58850854 -86738434 + (TCTA)n Simple_repeat Simple_repeat 4 29 0 3393 171 46 3 chr10 58850854 58851453 -86737835 + MER39B LTR ERV1 22 653 0 2030 219 95 15 chr10 58851453 58851690 -86737598 - Charlie1 DNA MER1_type -382 2379 2056 374 327 42 12 chr10 58851682 58851850 -86737438 - Charlie1 DNA MER1_type -2580 181 9 * 24 85 0 0 chr10 58852137 58852196 -86737092 + AT_rich Low_complexity Low_complexity 1 59 0 21 36 0 0 chr10 58852332 58852360 -86736928 + AT_rich Low_complexity Low_complexity 1 28 0 1221 189 85 12 chr10 58854650 58854754 -86734534 + AluJo SINE Alu 7 102 -210 180 97 0 0 chr10 58854754 58854785 -86734503 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1221 189 85 12 chr10 58854785 58854939 -86734349 + AluJo SINE Alu 102 284 -28 259 83 21 21 chr10 58854950 58854998 -86734290 + (TA)n Simple_repeat Simple_repeat 1 48 0 404 320 95 7 chr10 58855777 58855966 -86733322 + MIR3 SINE MIR 1 207 -1 264 100 0 0 chr10 58856838 58856878 -86732410 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 27 49 0 0 chr10 58857703 58857744 -86731544 + AT_rich Low_complexity Low_complexity 1 41 0 434 78 0 89 chr10 58858191 58858281 -86731007 + AluSp/q SINE Alu 232 313 0 414 151 0 0 chr10 58858412 58858485 -86730803 + (TG)n Simple_repeat Simple_repeat 2 74 0 223 344 42 10 chr10 58858573 58858669 -86730619 - MIR SINE MIR -1 261 163 22 99 0 0 chr10 58858764 58858835 -86730453 + AT_rich Low_complexity Low_complexity 1 71 0 215 378 68 30 chr10 58859589 58859885 -86729403 + L2 LINE L2 2559 2865 -449 255 364 160 35 chr10 58859932 58860163 -86729125 + L2 LINE L2 3012 3271 -1 261 0 0 0 chr10 58860719 58860748 -86728540 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 327 316 35 30 chr10 58861212 58861361 -86727927 - MIR3 SINE MIR -52 156 7 1984 176 68 39 chr10 58861463 58861905 -86727383 - L1MC1 LINE L1 0 6333 5879 1247 176 109 3 chr10 58861898 58862182 -86727106 - L1MC1 LINE L1 -675 5658 5345 * 25 51 0 0 chr10 58862319 58862358 -86726930 + AT_rich Low_complexity Low_complexity 1 39 0 264 189 46 65 chr10 58862381 58862534 -86726754 + (TTTAA)n Simple_repeat Simple_repeat 2 151 0 275 364 0 38 chr10 58863067 58863199 -86726089 - MIR3 SINE MIR -69 139 13 26 30 0 0 chr10 58863840 58863873 -86725415 + AT_rich Low_complexity Low_complexity 1 33 0 26 30 0 0 chr10 58864201 58864234 -86725054 + AT_rich Low_complexity Low_complexity 1 33 0 303 189 0 0 chr10 58864434 58864487 -86724801 - MLT1C LTR MaLR -2 465 413 491 231 22 37 chr10 58966414 58966548 -86622740 - MER3 DNA MER1_type -1 208 77 712 242 0 13 chr10 58967320 58967473 -86621815 + MLT2B3 LTR ERVL 384 534 -20 261 222 0 0 chr10 58967510 58967573 -86621715 + L1MC4 LINE L1 6641 6703 -1339 231 120 0 80 chr10 58967543 58967593 -86621695 - L1MC4 LINE L1 -1339 6703 6658 * 476 143 0 10 chr10 58968701 58968799 -86620489 - L1MA7 LINE L1 -3 6288 6192 324 0 0 0 chr10 58969045 58969081 -86620207 + (CA)n Simple_repeat Simple_repeat 2 37 0 1637 120 8 107 chr10 58969784 58970158 -86619130 + MER1B DNA MER1_type 1 337 0 263 88 45 0 chr10 58970372 58970463 -86618825 + (TA)n Simple_repeat Simple_repeat 1 95 0 308 227 41 31 chr10 58970463 58970560 -86618728 - L1MC4 LINE L1 -1333 6709 6612 742 148 33 0 chr10 58970571 58970693 -86618595 - FLAM_C SINE Alu -17 126 1 2105 113 3 3 chr10 58973364 58973657 -86615631 - AluSp SINE Alu -20 293 1 1436 181 49 7 chr10 58973777 58974065 -86615223 + AluJb SINE Alu 1 300 -12 27 0 0 0 chr10 58974612 58974639 -86614649 + AT_rich Low_complexity Low_complexity 1 27 0 22 0 0 0 chr10 58974692 58974714 -86614574 + AT_rich Low_complexity Low_complexity 1 22 0 2125 136 16 30 chr10 58975162 58975529 -86613759 - THE1C LTR MaLR -12 363 2 24 67 0 0 chr10 58975717 58975762 -86613526 + AT_rich Low_complexity Low_complexity 1 45 0 34 42 0 0 chr10 58977231 58977279 -86612009 + AT_rich Low_complexity Low_complexity 1 48 0 612 246 152 49 chr10 58977585 58977914 -86611374 + MLT1C LTR MaLR 1 363 -104 360 0 0 0 chr10 58977934 58977974 -86611314 + (TTA)n Simple_repeat Simple_repeat 2 41 0 259 184 0 0 chr10 58977974 58978023 -86611265 + MLT1C LTR MaLR 452 500 -5 1444 203 48 85 chr10 58978270 58978645 -86610643 + MLT1A2 LTR MaLR 8 368 -6 361 190 0 100 chr10 58979233 58979333 -86609955 + MLT1D LTR MaLR 48 142 -325 429 138 32 0 chr10 58979384 58979478 -86609810 + (TA)n Simple_repeat Simple_repeat 1 97 0 54 72 0 0 chr10 58979480 58979549 -86609739 + AT_rich Low_complexity Low_complexity 1 69 0 22 56 0 0 chr10 58979917 58979953 -86609335 + AT_rich Low_complexity Low_complexity 1 36 0 25 0 0 0 chr10 58981372 58981397 -86607891 + AT_rich Low_complexity Low_complexity 1 25 0 180 152 0 0 chr10 58981553 58981586 -86607702 + (TA)n Simple_repeat Simple_repeat 2 34 0 351 340 46 7 chr10 58982310 58982463 -86606825 - MIR SINE MIR -4 258 100 1355 220 86 49 chr10 58982531 58983018 -86606270 + MLT1D LTR MaLR 1 505 0 1931 129 0 36 chr10 58983395 58983698 -86605590 + AluSx SINE Alu 1 292 -20 26 0 0 0 chr10 58984026 58984052 -86605236 + AT_rich Low_complexity Low_complexity 1 26 0 1321 234 14 7 chr10 58984052 58984343 -86604945 - AluJb SINE Alu -19 293 1 274 162 27 27 chr10 58985252 58985326 -86603962 + CT-rich Low_complexity Low_complexity 3 76 0 1128 244 120 7 chr10 58985500 58985799 -86603489 + MER21B LTR ERV1 20 352 -511 583 173 107 40 chr10 58985826 58985976 -86603312 + MER21B LTR ERV1 685 844 -19 318 264 35 49 chr10 58986117 58986261 -86603027 - MLT1K LTR MaLR 0 588 447 2295 92 0 0 chr10 58986884 58987179 -86602109 - AluSg SINE Alu -15 295 1 186 361 42 0 chr10 58988899 58988971 -86600317 + MER5A DNA MER1_type 8 82 -107 222 37 0 0 chr10 58989604 58989631 -86599657 + (GA)n Simple_repeat Simple_repeat 2 28 0 * 234 0 0 0 chr10 58989630 58989656 -86599632 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 268 159 0 29 chr10 58990412 58990481 -86598807 + GA-rich Low_complexity Low_complexity 1 67 0 202 219 16 16 chr10 58990494 58990558 -86598730 + GA-rich Low_complexity Low_complexity 1 64 0 1149 291 80 40 chr10 58992947 58993646 -86595642 + L1ME3A LINE L1 5414 6138 -32 24 53 0 0 chr10 58994007 58994045 -86595243 + AT_rich Low_complexity Low_complexity 1 38 0 357 219 62 0 chr10 58994272 58994368 -86594920 - L1MD1 LINE L1 -6 6236 6135 263 242 0 0 chr10 58994374 58994440 -86594848 - L1MD1 LINE L1 -143 6099 6034 * 1710 281 101 23 chr10 58994438 58995519 -86593769 - L1M4 LINE L1 -2050 4096 2856 3426 125 2 6 chr10 58995519 58996032 -86593256 + MER9 LTR ERVK 1 511 0 1710 281 101 23 chr10 58996032 58996218 -86593070 - L1M4 LINE L1 -3290 2856 2686 224 211 0 102 chr10 58996366 58996494 -86592794 + CT-rich Low_complexity Low_complexity 2 116 0 23 54 0 0 chr10 58996952 58996989 -86592299 + AT_rich Low_complexity Low_complexity 1 37 0 283 247 0 49 chr10 58997229 58997310 -86591978 - L2 LINE L2 -1 3312 3236 309 360 99 50 chr10 58997705 58998291 -86590997 - L2 LINE L2 -453 2861 2247 24 32 0 0 chr10 58998583 58998614 -86590674 + AT_rich Low_complexity Low_complexity 1 31 0 23 54 0 0 chr10 58999010 58999047 -86590241 + AT_rich Low_complexity Low_complexity 1 37 0 23 0 0 0 chr10 58999136 58999159 -86590129 + AT_rich Low_complexity Low_complexity 1 23 0 610 304 110 66 chr10 58999710 59000364 -86588924 + HAL1b LINE L1 41 723 -625 211 143 71 0 chr10 59000708 59000750 -86588538 + (CATATA)n Simple_repeat Simple_repeat 2 46 0 445 312 89 32 chr10 59000926 59001400 -86587888 + L1M4 LINE L1 2314 2814 -3332 1474 236 32 47 chr10 59002408 59002875 -86586413 - MLT1C LTR MaLR -7 460 1 198 0 0 0 chr10 59003211 59003233 -86586055 + (TTG)n Simple_repeat Simple_repeat 3 24 0 1925 128 0 7 chr10 59003233 59003515 -86585773 - AluSx SINE Alu -32 280 1 5193 159 14 29 chr10 59004078 59005096 -86584192 + L1MA7 LINE L1 5284 6286 -5 717 63 0 0 chr10 59005794 59005889 -86583399 - AluY SINE Alu -6 305 211 2035 82 0 21 chr10 59006626 59006907 -86582381 + AluY SINE Alu 25 299 -12 926 211 10 102 chr10 59008383 59008686 -86580602 + AluJo SINE Alu 23 297 -15 249 369 8 8 chr10 59008825 59008947 -86580341 - Charlie8 DNA MER1_type -2181 236 115 334 219 0 0 chr10 59009583 59009647 -86579641 + MLT2B1 LTR ERVL 1 64 -456 254 269 7 40 chr10 59009648 59009797 -86579491 + (TATAA)n Simple_repeat Simple_repeat 3 146 0 305 331 166 0 chr10 59011374 59011525 -86577763 - MIR SINE MIR -28 234 59 394 348 100 9 chr10 59012216 59012446 -86576842 + MIR SINE MIR 12 262 0 24 0 0 0 chr10 59012659 59012683 -86576605 + AT_rich Low_complexity Low_complexity 1 24 0 26 30 0 0 chr10 59013535 59013568 -86575720 + AT_rich Low_complexity Low_complexity 1 33 0 23 33 0 0 chr10 59013589 59013619 -86575669 + AT_rich Low_complexity Low_complexity 1 30 0 29 0 0 0 chr10 59013672 59013701 -86575587 + AT_rich Low_complexity Low_complexity 1 29 0 231 218 18 0 chr10 59014586 59014641 -86574647 + (TCTA)n Simple_repeat Simple_repeat 4 59 0 296 261 0 0 chr10 59014641 59014706 -86574582 + MLT1K LTR MaLR 522 586 -2 292 313 43 48 chr10 59014871 59015222 -86574066 + L1MCc LINE L1 1186 1534 -4889 288 225 22 22 chr10 59015429 59015518 -86573770 + L1MCc LINE L1 1934 2022 -4909 916 269 94 61 chr10 59015692 59016402 -86572886 + L1MCc LINE L1 2287 2973 -3968 2050 127 3 0 chr10 59016402 59016694 -86572594 + AluSg SINE Alu 1 293 -17 916 269 94 61 chr10 59016694 59017391 -86571897 + L1MCc LINE L1 2973 3713 -3228 294 206 0 0 chr10 59017399 59017467 -86571821 + (TA)n Simple_repeat Simple_repeat 1 68 0 328 278 66 72 chr10 59017655 59017968 -86571320 + LTR33A LTR ERVL 1 347 -176 22 80 0 0 chr10 59019757 59019807 -86569481 + AT_rich Low_complexity Low_complexity 1 50 0 2166 127 3 0 chr10 59019894 59020202 -86569086 - AluSg SINE Alu -1 309 1 1340 221 10 13 chr10 59020362 59020669 -86568619 - AluJo SINE Alu -6 306 1 26 30 0 0 chr10 59021077 59021110 -86568178 + AT_rich Low_complexity Low_complexity 1 33 0 465 196 10 29 chr10 59021146 59021248 -86568040 - MLT1E LTR MaLR -51 603 504 551 279 43 54 chr10 59021249 59021546 -86567742 - MLT1E LTR MaLR -222 345 30 925 257 99 44 chr10 59022521 59022906 -86566382 - MLT2B1 LTR ERVL -2 518 113 322 104 0 0 chr10 59023219 59023269 -86566019 - MLT2C2 LTR ERVL -4 460 400 521 289 86 34 chr10 59023540 59024132 -86565156 - L1M4 LINE L1 -907 5239 4617 1308 276 74 48 chr10 59024421 59025169 -86564119 - L1M4 LINE L1 -2638 3508 2716 575 71 12 0 chr10 59025169 59025254 -86564034 + (TCTA)n Simple_repeat Simple_repeat 1 86 0 1308 276 74 48 chr10 59025254 59025680 -86563608 - L1M4 LINE L1 -3430 2716 2303 441 198 0 0 chr10 59025773 59025899 -86563389 + (TA)n Simple_repeat Simple_repeat 2 127 0 236 205 96 24 chr10 59025908 59025991 -86563297 - L1MC4 LINE L1 -1339 6703 6615 234 300 0 0 chr10 59026000 59026090 -86563198 + L1MC4 LINE L1 6614 6703 -1339 2480 121 0 10 chr10 59026295 59026682 -86562606 + L1PA13 LINE L1 5777 6159 -4 720 147 8 16 chr10 59026773 59026931 -86562357 + AluSg/x SINE Alu 168 312 0 272 203 0 0 chr10 59027775 59027839 -86561449 - L1MA2 LINE L1 0 6304 6241 25 51 0 0 chr10 59028037 59028076 -86561212 + AT_rich Low_complexity Low_complexity 1 39 0 21 0 0 0 chr10 59028257 59028278 -86561010 + AT_rich Low_complexity Low_complexity 1 21 0 1698 75 4 0 chr10 59028824 59029051 -86560237 + L1PA6 LINE L1 5920 6147 -7 23 33 0 0 chr10 59029495 59029525 -86559763 + AT_rich Low_complexity Low_complexity 1 30 0 1385 257 77 45 chr10 59029539 59030311 -86558977 + L1ME1 LINE L1 4967 5761 -405 4337 203 60 15 chr10 59030368 59031649 -86557639 + L1MC2 LINE L1 4901 6336 -8 670 287 43 34 chr10 59031648 59032000 -86557288 + L1ME1 LINE L1 5810 6164 -2 * 25 51 0 0 chr10 59032001 59032040 -86557248 + AT_rich Low_complexity Low_complexity 1 39 0 21 36 0 0 chr10 59032510 59032538 -86556750 + AT_rich Low_complexity Low_complexity 1 28 0 2129 123 0 0 chr10 59034076 59034385 -86554903 - AluSq SINE Alu 0 313 5 33 25 0 0 chr10 59035993 59036033 -86553255 + AT_rich Low_complexity Low_complexity 1 40 0 468 109 13 37 chr10 59036073 59036169 -86553119 - L1MA8 LINE L1 -198 6102 6010 407 270 17 17 chr10 59036364 59036479 -86552809 - MER5B DNA MER1_type -6 172 58 829 285 33 9 chr10 59036538 59036875 -86552413 - L1MCa LINE L1 -3516 2910 2566 1094 210 41 58 chr10 59036879 59037174 -86552114 - L1MCa LINE L1 -6101 325 36 287 233 0 0 chr10 59037695 59037755 -86551533 + L2 LINE L2 3254 3313 0 21 36 0 0 chr10 59038682 59038710 -86550578 + AT_rich Low_complexity Low_complexity 1 28 0 29 47 0 0 chr10 59038857 59038900 -86550388 + AT_rich Low_complexity Low_complexity 1 43 0 617 294 17 0 chr10 59038903 59039080 -86550208 - MIR SINE MIR -25 237 58 21 36 0 0 chr10 59039147 59039175 -86550113 + AT_rich Low_complexity Low_complexity 1 28 0 27 73 0 0 chr10 59039371 59039426 -86549862 + AT_rich Low_complexity Low_complexity 1 55 0 1401 167 36 22 chr10 59040062 59040338 -86548950 + AluJb SINE Alu 10 289 -23 21 36 0 0 chr10 59040338 59040366 -86548922 + AT_rich Low_complexity Low_complexity 1 28 0 232 350 58 21 chr10 59040472 59040715 -86548573 + L1ME3A LINE L1 5401 5652 -510 228 245 0 0 chr10 59040706 59040759 -86548529 + L1MC4 LINE L1 6652 6704 -1338 * 349 282 61 15 chr10 59040783 59040914 -86548374 + L1ME3A LINE L1 5657 5793 -377 242 315 81 25 chr10 59040957 59041154 -86548134 + L1ME3A LINE L1 5963 6170 0 470 259 52 18 chr10 59041211 59041381 -86547907 + MIR SINE MIR 48 222 -40 354 23 0 0 chr10 59042108 59042151 -86547137 + (CA)n Simple_repeat Simple_repeat 2 44 0 1380 263 50 24 chr10 59043189 59043691 -86545597 + L1ME3A LINE L1 5656 6170 0 1550 195 7 0 chr10 59043746 59044033 -86545255 + AluJb SINE Alu 5 293 -19 534 354 52 31 chr10 59044318 59044762 -86544526 - ERVL LTR ERVL -3974 1790 1338 183 268 0 0 chr10 59044803 59044844 -86544444 - L3 LINE CR1 -160 1417 1377 266 325 0 0 chr10 59045477 59045557 -86543731 + L2 LINE L2 3234 3313 0 182 279 49 0 chr10 59045661 59045722 -86543566 - L2 LINE L2 -1497 1817 1754 414 82 16 0 chr10 59045788 59045849 -86543439 - L1MA9 LINE L1 -167 6145 6084 237 282 100 12 chr10 59048317 59048487 -86540801 + L1MD2 LINE L1 3805 3989 -2157 1807 181 64 37 chr10 59049050 59049454 -86539834 + MSTC LTR MaLR 14 428 0 1892 273 77 123 chr10 59049943 59050328 -86538960 + L2 LINE L2 1345 1746 -1567 608 56 33 0 chr10 59050328 59050418 -86538870 - L1PA13 LINE L1 0 6163 6071 1892 273 77 123 chr10 59050418 59051767 -86537521 + L2 LINE L2 1746 2999 -314 364 328 100 42 chr10 59052164 59052405 -86536883 + L1MD2 LINE L1 5567 5821 -1987 27 29 0 0 chr10 59052490 59052524 -86536764 + AT_rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr10 59052556 59052577 -86536711 + AT_rich Low_complexity Low_complexity 1 21 0 1914 98 0 62 chr10 59053274 59053580 -86535708 - AluY SINE Alu -1 310 24 288 344 183 5 chr10 59053870 59054056 -86535232 - MIR SINE MIR -26 236 18 2352 164 29 2 chr10 59054514 59054935 -86534353 + MSTB1 LTR MaLR 1 432 0 276 310 105 53 chr10 59056724 59056895 -86532393 + MIR SINE MIR 83 262 0 23 0 0 0 chr10 59057026 59057049 -86532239 + AT_rich Low_complexity Low_complexity 1 23 0 495 279 77 53 chr10 59057161 59057762 -86531526 + Charlie2 DNA MER1_type 2243 2857 -5 30 0 0 0 chr10 59058996 59059026 -86530262 + AT_rich Low_complexity Low_complexity 1 30 0 511 309 7 7 chr10 59059136 59059288 -86530000 - MLT1L LTR MaLR -113 502 351 697 265 54 35 chr10 59060152 59060412 -86528876 + L1MD2 LINE L1 6040 6304 -55 1094 235 3 29 chr10 59060420 59060731 -86528557 - L1MA4 LINE L1 -7 6293 5991 234 94 0 0 chr10 59060730 59060762 -86528526 + L1MD1 LINE L1 6186 6217 -25 * 294 303 98 15 chr10 59061126 59061258 -86528030 + L2 LINE L2 3171 3313 0 1810 184 13 20 chr10 59061703 59062094 -86527194 - MLT1B LTR MaLR 0 390 3 465 206 12 4 chr10 59063025 59063278 -86526010 + (TATAA)n Simple_repeat Simple_repeat 1 255 0 207 272 0 0 chr10 59063248 59063373 -86525915 + (TATAG)n Simple_repeat Simple_repeat 2 126 0 * 1211 238 61 22 chr10 59064021 59064382 -86524906 - L1ME1 LINE L1 -222 5944 5570 968 253 37 21 chr10 59064408 59064931 -86524357 - MLT1F1 LTR MaLR -4 563 1 3956 277 78 39 chr10 59064931 59067375 -86521913 - L1ME1 LINE L1 -1206 4940 2401 340 270 34 0 chr10 59067679 59067768 -86521520 - MIR SINE MIR -107 155 64 1993 118 3 21 chr10 59068074 59068363 -86520925 - AluSg SINE Alu -26 284 1 1853 80 0 16 chr10 59069398 59069648 -86519640 + AluY SINE Alu 53 298 -13 1209 304 64 49 chr10 59069945 59070694 -86518594 - L1ME3 LINE L1 -43 6119 5360 22 70 0 0 chr10 59070745 59070788 -86518500 + AT_rich Low_complexity Low_complexity 1 43 0 707 266 34 11 chr10 59071095 59071272 -86518016 + MLT1E LTR MaLR 11 191 -402 * 1088 229 22 0 chr10 59071266 59071493 -86517795 + MLT1E LTR MaLR 361 592 -1 427 365 80 36 chr10 59073410 59073772 -86515516 + LTR16C LTR ERVL 61 438 -53 796 336 27 8 chr10 59074443 59074812 -86514476 + HERV16 LTR ERVL 964 1339 -3657 554 372 44 25 chr10 59075403 59075937 -86513351 + HERV16 LTR ERVL 2068 2609 -3045 784 271 73 76 chr10 59077411 59077966 -86511322 - MLT1E2 LTR MaLR -3 623 1 243 0 0 0 chr10 59078156 59078183 -86511105 + (TG)n Simple_repeat Simple_repeat 1 27 0 459 324 73 27 chr10 59078205 59078424 -86510864 - L2 LINE L2 -578 2736 2508 260 216 40 27 chr10 59078665 59078739 -86510549 + MER5A DNA MER1_type 87 161 -28 23 33 0 0 chr10 59078860 59078890 -86510398 + AT_rich Low_complexity Low_complexity 1 30 0 28 0 0 0 chr10 59078934 59078962 -86510326 + AT_rich Low_complexity Low_complexity 1 28 0 1976 228 49 4 chr10 59080837 59081310 -86507978 + LTR65 LTR ERV1 21 514 -155 221 330 0 53 chr10 59081489 59081677 -86507611 + G-rich Low_complexity Low_complexity 1 178 0 212 174 29 43 chr10 59081775 59081844 -86507444 + (ATGTG)n Simple_repeat Simple_repeat 1 68 0 211 159 48 32 chr10 59081814 59081877 -86507411 + (TATATG)n Simple_repeat Simple_repeat 6 69 0 * 1745 213 59 29 chr10 59081877 59082432 -86506856 - L1MB4 LINE L1 -9 6171 5710 217 303 0 0 chr10 59083381 59083457 -86505831 + A-rich Low_complexity Low_complexity 1 76 0 564 256 82 31 chr10 59083774 59083969 -86505319 - L2 LINE L2 0 3313 3109 10161 39 0 3 chr10 59083970 59085984 -86503304 + L1PA5 LINE L1 4137 6150 -4 250 236 0 0 chr10 59085987 59086059 -86503229 + A-rich Low_complexity Low_complexity 1 72 0 2201 127 16 24 chr10 59086144 59086522 -86502766 + THE1C LTR MaLR 1 375 0 546 299 124 46 chr10 59086565 59086607 -86502681 - L2 LINE L2 -349 2965 2928 1536 230 14 24 chr10 59086607 59086976 -86502312 + MLT1A1 LTR MaLR 1 365 0 546 299 124 46 chr10 59086976 59087345 -86501943 - L2 LINE L2 -386 2928 2522 1588 284 42 20 chr10 59087386 59088023 -86501265 - L1ME3 LINE L1 -17 6145 5495 688 161 0 17 chr10 59088044 59088162 -86501126 - FRAM SINE Alu -20 156 41 622 262 29 0 chr10 59088163 59088455 -86500833 - L1ME3 LINE L1 -669 5493 5191 * 4375 164 60 12 chr10 59088452 59089313 -86499975 - L1MB1 LINE L1 0 6168 5266 28 86 0 0 chr10 59089322 59089392 -86499896 + AT_rich Low_complexity Low_complexity 1 70 0 21 0 0 0 chr10 59089411 59089432 -86499856 + AT_rich Low_complexity Low_complexity 1 21 0 285 306 72 0 chr10 59089434 59089545 -86499743 - L1MB1 LINE L1 -1062 5084 4966 244 215 126 185 chr10 59089692 59089827 -86499461 - MER5B DNA MER1_type -2 176 50 814 207 0 0 chr10 59089837 59089982 -86499306 - FRAM SINE Alu -30 146 2 240 270 32 16 chr10 59089983 59090046 -86499242 - MER5B DNA MER1_type -114 64 1 222 37 0 0 chr10 59090129 59090156 -86499132 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 22 35 0 0 chr10 59091276 59091305 -86497983 + AT_rich Low_complexity Low_complexity 1 29 0 385 50 33 0 chr10 59091385 59091445 -86497843 + (GA)n Simple_repeat Simple_repeat 1 62 0 504 257 166 0 chr10 59091952 59092139 -86497149 - L1MB1 LINE L1 -1557 4589 4372 1400 184 0 56 chr10 59092148 59092453 -86496835 - AluJo SINE Alu -24 288 1 2232 251 63 56 chr10 59092486 59092634 -86496654 - L1MB1 LINE L1 -1997 4149 4004 201 39 0 0 chr10 59092634 59092660 -86496628 + (TTG)n Simple_repeat Simple_repeat 3 28 0 2232 251 63 56 chr10 59092660 59093401 -86495887 - L1MB1 LINE L1 -2142 4004 3248 2328 105 0 0 chr10 59093401 59093714 -86495574 - AluSq SINE Alu 0 313 1 2232 251 63 56 chr10 59093714 59093953 -86495335 - L1MB1 LINE L1 -2898 3248 3012 * 4216 211 17 20 chr10 59093933 59094943 -86494345 - L1MD1 LINE L1 0 6242 5236 292 276 48 38 chr10 59094927 59095032 -86494256 - L1MDa LINE L1 -5549 991 886 * 248 234 16 0 chr10 59095701 59095765 -86493523 + CT-rich Low_complexity Low_complexity 2 66 0 384 347 78 12 chr10 59095888 59096133 -86493155 + MIR SINE MIR 1 261 -1 1346 229 134 31 chr10 59097615 59098039 -86491249 - LTR40a LTR ERVL -51 468 1 1201 35 0 0 chr10 59098793 59098938 -86490350 + L1PA7 LINE L1 5764 5908 -246 378 121 52 0 chr10 59099890 59100006 -86489282 + (TA)n Simple_repeat Simple_repeat 2 123 0 199 355 99 20 chr10 59100308 59100460 -86488828 - MIR SINE MIR -8 254 91 21 71 0 0 chr10 59101404 59101446 -86487842 + AT_rich Low_complexity Low_complexity 1 42 0 22 35 0 0 chr10 59101695 59101724 -86487564 + AT_rich Low_complexity Low_complexity 1 29 0 284 279 130 13 chr10 59101741 59101895 -86487393 + Charlie8 DNA MER1_type 94 265 -2152 259 281 120 30 chr10 59102635 59102802 -86486486 - MIR SINE MIR -7 255 74 1231 216 72 49 chr10 59102841 59103189 -86486099 - MLT1A1 LTR MaLR 0 365 10 6591 74 8 7 chr10 59104370 59105391 -86483897 + L1PA7 LINE L1 5133 6154 0 718 117 5 1 chr10 59105448 59105714 -86483574 + AluSx SINE Alu 5 304 0 252 0 0 0 chr10 59105808 59105836 -86483452 + (CA)n Simple_repeat Simple_repeat 2 29 0 203 290 16 0 chr10 59105942 59106004 -86483284 + (TCCA)n Simple_repeat Simple_repeat 4 66 0 412 304 82 7 chr10 59106181 59106316 -86482972 + MIR SINE MIR 20 164 -98 283 358 47 20 chr10 59108770 59108918 -86480370 - L2 LINE L2 0 3272 3121 3121 149 66 16 chr10 59108936 59109555 -86479733 + MER39B LTR ERV1 4 653 0 181 285 54 100 chr10 59109765 59109817 -86479471 - MIR3 SINE MIR -81 127 74 1881 136 0 38 chr10 59109817 59110133 -86479155 + AluSc SINE Alu 1 304 -5 181 285 54 100 chr10 59110133 59110210 -86479078 - MIR3 SINE MIR -134 74 4 354 311 49 33 chr10 59111262 59111445 -86477843 - MER58A DNA MER1_type 0 224 39 330 330 61 24 chr10 59111492 59111704 -86477584 + L1M4 LINE L1 48 267 -6275 271 281 31 27 chr10 59111988 59112098 -86477190 + L1M4 LINE L1 615 910 -5736 2737 108 5 26 chr10 59112142 59112566 -86476722 - L1PA11 LINE L1 -1 6173 5759 3537 232 47 28 chr10 59112676 59114343 -86474945 + L1M4 LINE L1 817 2606 -4040 350 181 28 0 chr10 59114457 59114529 -86474759 - AluS SINE Alu -225 74 1 549 67 0 0 chr10 59116434 59116509 -86472779 - L1PA11 LINE L1 0 6174 6100 211 232 24 24 chr10 59117050 59117132 -86472156 + (TAAA)n Simple_repeat Simple_repeat 2 83 0 612 179 26 0 chr10 59117199 59117316 -86471972 - L1MB1 LINE L1 -278 5890 5771 1273 175 8 12 chr10 59117316 59117561 -86471727 + L1MB1 LINE L1 5924 6168 0 262 285 117 39 chr10 59117807 59117986 -86471302 - MLT1J1 LTR MaLR -253 193 1 1630 188 68 86 chr10 59118151 59118227 -86471061 + MER44D DNA MER2_type 32 108 -2379 1981 116 25 0 chr10 59118227 59118531 -86470757 - AluSx SINE Alu 0 311 1 1630 188 68 86 chr10 59118531 59118979 -86470309 + MER44D DNA MER2_type 108 603 -2 373 316 131 19 chr10 59119053 59119259 -86470029 - L2 LINE L2 -820 2494 2266 236 311 22 0 chr10 59120059 59120149 -86469139 + MLT1L LTR MaLR 167 258 -357 2631 237 28 11 chr10 59122126 59122768 -86466520 - MER82 DNA MER2_type 0 653 1 220 193 57 11 chr10 59122769 59122857 -86466431 + (TA)n Simple_repeat Simple_repeat 2 93 0 347 317 100 28 chr10 59123172 59123421 -86465867 - L1ME3A LINE L1 -70 6100 5834 21 36 0 0 chr10 59124952 59124980 -86464308 + AT_rich Low_complexity Low_complexity 1 28 0 6189 227 20 26 chr10 59126112 59126186 -86463102 - L1 LINE L1 -923 5223 5150 2268 205 9 7 chr10 59126186 59126611 -86462677 - MSTB LTR MaLR 0 426 1 6189 227 20 26 chr10 59126611 59128198 -86461090 - L1 LINE L1 -996 5150 3573 5465 204 15 24 chr10 59128198 59129489 -86459799 - L1P5 LINE L1 -508 5705 4432 4914 65 3 0 chr10 59129489 59130118 -86459170 - L1PA7 LINE L1 -6 6148 5518 5465 204 15 24 chr10 59130118 59130472 -86458816 - L1P5 LINE L1 -1781 4432 4076 1951 241 18 40 chr10 59130472 59130623 -86458665 - L1 LINE L1 -3157 3046 2893 1277 190 48 61 chr10 59130623 59130918 -86458370 - AluJo SINE Alu -21 291 1 1951 241 18 40 chr10 59130918 59131388 -86457900 - L1 LINE L1 -3310 2893 2439 802 312 15 6 chr10 59131395 59131704 -86457584 - L1P5 LINE L1 -5335 868 465 2277 98 0 0 chr10 59132023 59132320 -86456968 - AluY SINE Alu -14 297 1 4809 183 41 24 chr10 59134080 59134973 -86454315 - L1MA6 LINE L1 0 7719 6843 1886 149 49 32 chr10 59134973 59135342 -86453946 + THE1C LTR MaLR 1 375 0 4809 183 41 24 chr10 59135342 59136381 -86452907 - L1MA6 LINE L1 -876 6843 5760 * 42270 34 23 1 chr10 59136368 59142385 -86446903 - L1PA2 LINE L1 -4 6151 2 5261 214 45 15 chr10 59142385 59143737 -86445551 - L1MA6 LINE L1 -1769 5796 4404 3334 252 73 42 chr10 59143733 59145886 -86443402 - L1MA6 LINE L1 -3490 4075 2055 * 291 308 45 42 chr10 59146149 59146461 -86442827 + ERVL LTR ERVL 3764 4076 -1688 459 328 6 17 chr10 59146612 59146792 -86442496 + ERVL LTR ERVL 4303 4480 -1284 453 314 95 4 chr10 59147119 59147371 -86441917 + HAL1 LINE L1 1546 1820 -687 23 33 0 0 chr10 59147749 59147779 -86441509 + AT_rich Low_complexity Low_complexity 1 30 0 267 282 51 0 chr10 59148218 59148296 -86440992 + MIR SINE MIR 12 93 -169 2001 116 7 14 chr10 59148530 59148823 -86440465 - AluSx SINE Alu -19 293 3 2903 6 0 0 chr10 59148855 59149173 -86440115 - AluYb8 SINE Alu 0 318 1 23 0 0 0 chr10 59150119 59150142 -86439146 + AT_rich Low_complexity Low_complexity 1 23 0 225 318 104 71 chr10 59151804 59151958 -86437330 + MIR3 SINE MIR 26 184 -24 1953 203 34 5 chr10 59152590 59152970 -86436318 + MSTB LTR MaLR 36 426 0 2170 107 0 19 chr10 59153206 59153516 -86435772 - AluSx SINE Alu -8 304 1 370 341 47 49 chr10 59154157 59154544 -86434744 + L1MC4a LINE L1 6542 6927 -881 265 310 8 16 chr10 59154798 59154927 -86434361 + L1MC4 LINE L1 7191 7318 -724 22 0 0 0 chr10 59155114 59155136 -86434152 + AT_rich Low_complexity Low_complexity 1 22 0 1112 65 0 0 chr10 59155285 59155424 -86433864 + L1PA7 LINE L1 5993 6131 -23 71 77 0 0 chr10 59156154 59156309 -86432979 + AT_rich Low_complexity Low_complexity 1 155 0 439 281 65 5 chr10 59156497 59156682 -86432606 + MER114 LTR ERV 1 196 -452 2216 274 61 43 chr10 59156859 59157608 -86431680 + L1M4b LINE L1 9 771 -6088 1540 278 34 45 chr10 59157622 59158224 -86431064 + L1MB4 LINE L1 466 1041 -6518 2885 253 54 66 chr10 59158235 59159818 -86429470 + L1MB4 LINE L1 2010 3469 -4096 1725 195 181 34 chr10 59159839 59160363 -86428925 + L1M4b LINE L1 978 1578 -5281 7447 247 59 31 chr10 59160468 59163488 -86425800 + L1M4b LINE L1 3017 6125 -832 5750 102 0 4 chr10 59163488 59164492 -86424796 - L1PB1 LINE L1 0 6151 5159 2988 212 34 44 chr10 59164492 59165023 -86424265 + L1MB4 LINE L1 6197 6732 -867 1778 155 3 47 chr10 59165023 59165340 -86423948 - AluSx SINE Alu -9 303 1 2988 212 34 44 chr10 59165340 59166054 -86423234 + L1MB4 LINE L1 6732 7578 -21 381 275 248 7 chr10 59166132 59166281 -86423007 - MER5A DNA MER1_type 0 189 5 471 302 42 37 chr10 59166496 59166711 -86422577 + MIR SINE MIR 33 248 -14 21 57 0 0 chr10 59166923 59166958 -86422330 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr10 59167134 59167156 -86422132 + AT_rich Low_complexity Low_complexity 1 22 0 1781 178 89 0 chr10 59167298 59167668 -86421620 - MER57A LTR ERV1 0 403 1 1126 132 218 5 chr10 59167668 59167888 -86421400 - MER57A-int LTR ERV1 0 7537 7271 734 123 26 0 chr10 59167908 59168022 -86421266 - LTR54B LTR ERV1 -379 119 3 9266 107 17 5 chr10 59168026 59169350 -86419938 - MER57A-int LTR ERV1 -388 7149 5810 1057 258 216 51 chr10 59169350 59169800 -86419488 + MER52A LTR ERV1 1 524 -1231 22 0 0 0 chr10 59170201 59170223 -86419065 + AT_rich Low_complexity Low_complexity 1 22 0 2587 254 65 11 chr10 59170374 59171201 -86418087 + MER63C DNA MER1_type 55 926 -4 212 211 35 0 chr10 59171415 59171472 -86417816 + CT-rich Low_complexity Low_complexity 2 60 0 535 194 28 0 chr10 59171620 59171728 -86417560 + FLAM_C SINE Alu 14 124 -19 2169 103 3 0 chr10 59171744 59172026 -86417262 - AluSg SINE Alu -27 283 1 21 0 0 0 chr10 59172028 59172049 -86417239 + AT_rich Low_complexity Low_complexity 1 21 0 2186 118 0 13 chr10 59172266 59172570 -86416718 + AluSg SINE Alu 1 300 -10 2328 70 0 10 chr10 59172760 59173059 -86416229 + AluY SINE Alu 2 297 -14 21 57 0 0 chr10 59174484 59174519 -86414769 + AT_rich Low_complexity Low_complexity 1 35 0 24 53 0 0 chr10 59174959 59174997 -86414291 + AT_rich Low_complexity Low_complexity 1 38 0 189 171 0 0 chr10 59175306 59175341 -86413947 + (TAAA)n Simple_repeat Simple_repeat 1 35 0 24 32 0 0 chr10 59175395 59175426 -86413862 + AT_rich Low_complexity Low_complexity 1 31 0 294 261 77 107 chr10 59175998 59176335 -86412953 - MLT1J LTR MaLR -72 439 113 1617 74 0 0 chr10 59176374 59176577 -86412711 + THE1A LTR MaLR 1 203 -152 206 174 0 22 chr10 59177808 59177854 -86411434 + (TTTA)n Simple_repeat Simple_repeat 4 48 0 1156 129 5 15 chr10 59177990 59178192 -86411096 + L1MA9 LINE L1 6081 6280 -32 237 313 24 48 chr10 59178206 59178289 -86410999 + MER45 DNA AcHobo 1 81 -97 2067 113 89 0 chr10 59178290 59178616 -86410672 - THE1A LTR MaLR 0 355 1 10233 111 7 70 chr10 59178616 59180302 -86408986 - THE1A-int LTR MaLR 0 1580 1 2388 119 6 3 chr10 59180302 59180656 -86408632 - THE1A LTR MaLR 0 355 1 499 267 9 0 chr10 59180659 59180775 -86408513 + MER45R DNA AcHobo 92 208 -1373 2152 217 38 26 chr10 59180840 59181523 -86407765 + MER45R DNA AcHobo 890 1580 -1 42188 37 22 4 chr10 59181644 59187686 -86401602 + L1PA3 LINE L1 3 6151 -4 309 278 6 75 chr10 59187952 59188125 -86401163 - MER20B DNA MER1_type -12 771 611 1559 167 78 36 chr10 59188236 59188596 -86400692 - THE1C LTR MaLR 0 375 1 8647 158 32 38 chr10 59188596 59190183 -86399105 - THE1C-int LTR MaLR 0 1580 3 1444 159 171 31 chr10 59190186 59190352 -86398936 - THE1C LTR MaLR -2 373 232 306 0 0 0 chr10 59190352 59190386 -86398902 + (GA)n Simple_repeat Simple_repeat 1 34 0 1444 159 171 31 chr10 59190386 59190546 -86398742 - THE1C LTR MaLR -143 232 1 460 281 120 36 chr10 59190546 59190905 -86398383 - MER20B DNA MER1_type -331 452 64 252 311 67 34 chr10 59191301 59191420 -86397868 + MIR SINE MIR 84 207 -1 22 35 0 0 chr10 59193225 59193254 -86396034 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr10 59193265 59193287 -86396001 + AT_rich Low_complexity Low_complexity 1 22 0 205 336 96 16 chr10 59193489 59193614 -86395674 - MIR SINE MIR -106 156 22 198 348 33 11 chr10 59194750 59194842 -86394446 + MIR SINE MIR 53 146 -62 22 0 0 0 chr10 59195311 59195333 -86393955 + AT_rich Low_complexity Low_complexity 1 22 0 2033 83 0 73 chr10 59195425 59195751 -86393537 + AluY SINE Alu 1 304 0 25 51 0 0 chr10 59196785 59196824 -86392464 + AT_rich Low_complexity Low_complexity 1 39 0 491 176 0 0 chr10 59198099 59198190 -86391098 + L1PA16 LINE L1 6061 6151 -15 625 218 32 32 chr10 59198559 59198715 -86390573 + MLT1E LTR MaLR 11 166 -427 188 132 0 26 chr10 59198781 59198819 -86390469 + (GA)n Simple_repeat Simple_repeat 2 38 0 627 289 109 46 chr10 59198920 59199204 -86390084 + MLT1E LTR MaLR 279 580 -13 2983 172 33 51 chr10 59199624 59200348 -86388940 - L1M2 LINE L1 -743 5403 4743 2166 209 34 8 chr10 59200318 59200796 -86388492 + L1 LINE L1 2224 2713 -3433 * 4354 137 7 1 chr10 59201015 59201693 -86387595 - L1PA16 LINE L1 -13 6468 5787 5813 62 11 3 chr10 59202166 59202918 -86386370 - L1PA7 LINE L1 -1 6153 5396 12513 113 5 21 chr10 59202918 59205975 -86383313 - L1PA16 LINE L1 -3411 3050 3 224 365 70 9 chr10 59207752 59207867 -86381421 + MER5A DNA MER1_type 65 186 -3 22 0 0 0 chr10 59208030 59208052 -86381236 + AT_rich Low_complexity Low_complexity 1 22 0 263 274 62 97 chr10 59208082 59208195 -86381093 - L2 LINE L2 0 3272 3164 204 97 0 0 chr10 59208348 59208379 -86380909 + (TG)n Simple_repeat Simple_repeat 2 32 0 976 271 83 107 chr10 59209212 59209619 -86379669 - MLT1E LTR MaLR -2 591 176 192 40 0 0 chr10 59209619 59209644 -86379644 + (TA)n Simple_repeat Simple_repeat 1 25 0 300 83 0 0 chr10 59209647 59209695 -86379593 + (CA)n Simple_repeat Simple_repeat 2 49 0 1235 206 113 0 chr10 59209705 59209962 -86379326 - AluJo SINE Alu -16 286 1 976 271 83 107 chr10 59209962 59210191 -86379097 - MLT1E LTR MaLR -428 165 17 1934 129 4 4 chr10 59210311 59210612 -86378676 - AluSx SINE Alu 0 305 5 1183 215 59 0 chr10 59211823 59212130 -86377158 + Tigger3(Golem) DNA MER2_type 2703 3027 -2 381 314 142 6 chr10 59212489 59212658 -86376630 + MIR SINE MIR 51 242 -20 447 289 223 11 chr10 59212982 59213255 -86376033 - Charlie2 DNA MER1_type -2416 366 36 265 364 75 0 chr10 59213433 59213661 -86375627 - MLT1J LTR MaLR -258 253 9 21 0 0 0 chr10 59214194 59214215 -86375073 + AT_rich Low_complexity Low_complexity 1 21 0 28 29 0 0 chr10 59214435 59214470 -86374818 + AT_rich Low_complexity Low_complexity 1 35 0 25 31 0 0 chr10 59215068 59215100 -86374188 + AT_rich Low_complexity Low_complexity 1 32 0 28 29 0 0 chr10 59215321 59215356 -86373932 + AT_rich Low_complexity Low_complexity 1 35 0 221 348 68 25 chr10 59215897 59216015 -86373273 - MIR SINE MIR -122 140 18 2010 0 0 5 chr10 59216093 59216314 -86372974 - AluYa5 SINE Alu -6 305 86 25 75 0 0 chr10 59217160 59217213 -86372075 + AT_rich Low_complexity Low_complexity 1 53 0 368 335 94 16 chr10 59219668 59219859 -86369429 + MIR SINE MIR 57 262 0 420 281 117 23 chr10 59221703 59221874 -86367414 - MER82 DNA MER2_type -23 630 444 391 291 61 24 chr10 59221920 59222085 -86367203 + MIR SINE MIR 19 189 -73 261 256 0 0 chr10 59222103 59222185 -86367103 + (TA)n Simple_repeat Simple_repeat 2 83 0 1683 182 27 8 chr10 59222255 59222692 -86366596 - MER61D LTR ERV1 0 501 1 971 142 27 8 chr10 59222961 59223209 -86366079 - L1MC/D LINE L1 -743 5403 5203 230 286 14 0 chr10 59223577 59223647 -86365641 + (TA)n Simple_repeat Simple_repeat 2 72 0 2061 108 7 0 chr10 59223659 59223947 -86365341 - AluSg SINE Alu -20 290 1 2217 120 0 13 chr10 59226383 59226700 -86362588 - AluSq SINE Alu 0 313 1 425 270 122 24 chr10 59226726 59227144 -86362144 + MER113 DNA MER1_type? 2 460 -61 2673 217 19 35 chr10 59227303 59227477 -86361811 + L1MC3 LINE L1 7104 7279 -506 1440 203 0 33 chr10 59227477 59227783 -86361505 + AluJo SINE Alu 1 296 -16 2673 217 19 35 chr10 59227783 59228295 -86360993 + L1MC3 LINE L1 7279 7779 -6 675 135 0 130 chr10 59228438 59228630 -86360658 - L1MA8 LINE L1 -157 6134 5968 309 51 0 0 chr10 59229966 59230005 -86359283 + (TG)n Simple_repeat Simple_repeat 2 40 0 219 296 28 14 chr10 59230712 59230783 -86358505 - L2 LINE L2 -55 3258 3187 1261 188 45 98 chr10 59230908 59231105 -86358183 - MLT1B LTR MaLR -32 358 189 2268 96 0 26 chr10 59231105 59231417 -86357871 - AluSx SINE Alu -8 304 1 1261 188 45 98 chr10 59231417 59231597 -86357691 - MLT1B LTR MaLR -201 189 1 277 200 64 9 chr10 59231603 59231713 -86357575 + (TA)n Simple_repeat Simple_repeat 2 117 0 1028 227 0 14 chr10 59232030 59232152 -86357136 + AluJo SINE Alu 1 120 -192 234 0 0 0 chr10 59232152 59232178 -86357110 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 1028 227 0 14 chr10 59232178 59232275 -86357013 + AluJo SINE Alu 120 217 -95 309 183 0 0 chr10 59232318 59232378 -86356910 + (TA)n Simple_repeat Simple_repeat 2 61 0 225 356 0 0 chr10 59232390 59232480 -86356808 - L1MC4 LINE L1 -1339 6703 6614 * 260 237 21 65 chr10 59232407 59232500 -86356788 + L1MC4 LINE L1 6615 6703 -1339 367 198 12 12 chr10 59232550 59232631 -86356657 + AluJo SINE Alu 220 300 -2 180 200 0 25 chr10 59233365 59233405 -86355883 - L2 LINE L2 -8 3264 3226 468 263 8 4 chr10 59233617 59233800 -86355488 + MER41B LTR ERV1 113 430 -205 476 272 65 6 chr10 59234104 59234273 -86355015 - MER97b DNA MER1_type? -874 179 1 340 335 91 26 chr10 59235813 59236153 -86353135 + L1ME4a LINE L1 5494 5855 -266 27 0 0 0 chr10 59236596 59236623 -86352665 + AT_rich Low_complexity Low_complexity 1 27 0 452 197 84 14 chr10 59236909 59237051 -86352237 - Charlie5 DNA MER1_type -113 2499 2348 * 519 162 78 63 chr10 59237045 59237245 -86352043 - Charlie5 DNA MER1_type -2490 122 1 4385 163 14 0 chr10 59237507 59238264 -86351024 - L1PA16 LINE L1 -9 6157 5390 3710 152 21 26 chr10 59238265 59238944 -86350344 + L1PA15-16 LINE L1 2182 2856 -3993 1348 254 98 14 chr10 59239585 59240014 -86349274 + MLT1C LTR MaLR 1 465 -2 216 0 0 0 chr10 59240222 59240246 -86349042 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 341 239 9 0 chr10 59240542 59240606 -86348682 + CT-rich Low_complexity Low_complexity 2 69 -42 2134 110 0 3 chr10 59240606 59240896 -86348392 - AluSc SINE Alu -6 303 15 341 239 9 0 chr10 59240896 59240940 -86348348 + CT-rich Low_complexity Low_complexity 69 111 0 2175 95 0 3 chr10 59241328 59241648 -86347640 - AluSq SINE Alu 0 319 1 604 169 51 0 chr10 59241667 59241785 -86347503 + FLAM_C SINE Alu 1 124 -9 189 0 0 0 chr10 59244114 59244135 -86345153 + (TG)n Simple_repeat Simple_repeat 2 22 0 22 70 0 0 chr10 59244248 59244291 -86344997 + AT_rich Low_complexity Low_complexity 1 43 0 25 0 0 0 chr10 59244349 59244374 -86344914 + AT_rich Low_complexity Low_complexity 1 25 0 218 103 0 26 chr10 59244509 59244548 -86344740 + (TG)n Simple_repeat Simple_repeat 2 39 0 270 136 0 0 chr10 59246802 59246846 -86342442 + (T)n Simple_repeat Simple_repeat 1 44 0 421 163 0 0 chr10 59246878 59246958 -86342330 - L1MA4A LINE L1 -2 6301 6222 1584 161 42 11 chr10 59246991 59247276 -86342012 - AluSx SINE Alu -18 294 1 2565 32 0 7 chr10 59247396 59247704 -86341584 - AluY SINE Alu -5 306 1 211 339 15 0 chr10 59248677 59248742 -86340546 - L2 LINE L2 0 3313 3248 22 0 0 0 chr10 59249250 59249272 -86340016 + AT_rich Low_complexity Low_complexity 1 22 0 318 326 127 61 chr10 59250278 59250735 -86338553 + L2 LINE L2 2825 3311 -2 388 343 56 79 chr10 59251113 59251507 -86337781 + L1MC4a LINE L1 5464 5848 -1960 451 252 112 29 chr10 59251752 59251994 -86337294 + L1ME LINE L1 4536 4797 -1349 1769 173 9 24 chr10 59252045 59252380 -86336908 - THE1C LTR MaLR 0 375 46 10158 122 11 35 chr10 59252399 59254019 -86335269 - THE1C-int LTR MaLR 0 1580 1 2043 133 21 44 chr10 59254019 59254403 -86334885 - THE1C LTR MaLR 0 375 1 227 309 46 42 chr10 59254415 59254632 -86334656 + L1ME LINE L1 4857 5074 -1072 839 263 84 24 chr10 59254684 59255201 -86334087 + L1ME LINE L1 5153 5686 -478 3068 183 54 16 chr10 59255206 59255524 -86333764 + Tigger3b DNA MER2_type 3 307 -2721 360 0 0 0 chr10 59255524 59255564 -86333724 + (TG)n Simple_repeat Simple_repeat 1 40 0 3068 183 54 16 chr10 59255564 59255890 -86333398 + Tigger3b DNA MER2_type 307 672 -559 303 313 41 41 chr10 59256550 59256745 -86332543 - L2 LINE L2 -1623 1691 1497 195 42 0 0 chr10 59256898 59256922 -86332366 + (T)n Simple_repeat Simple_repeat 1 24 0 261 109 0 0 chr10 59258453 59258499 -86330789 + (CA)n Simple_repeat Simple_repeat 2 47 0 1268 120 9 5 chr10 59259467 59259683 -86329605 - L1MA5A LINE L1 0 6297 6081 296 193 24 24 chr10 59260490 59260573 -86328715 - L1M4 LINE L1 -3717 2927 2845 * 2854 216 40 31 chr10 59260564 59261593 -86327695 - L1MB4 LINE L1 0 6180 5035 1022 195 50 5 chr10 59261610 59261898 -86327390 - L1M4 LINE L1 -3933 2711 2415 497 29 0 15 chr10 59261953 59262021 -86327267 + (TTTA)n Simple_repeat Simple_repeat 2 68 0 1873 131 7 11 chr10 59262023 59262306 -86326982 - AluSx SINE Alu -30 282 1 2472 242 52 45 chr10 59262306 59263369 -86325919 - L1M4 LINE L1 -4754 1892 829 279 229 8 34 chr10 59263375 59263403 -86325885 + A-rich Low_complexity Low_complexity 3 30 -87 1986 130 0 40 chr10 59263403 59263725 -86325563 + AluSx SINE Alu 1 309 -3 279 229 8 34 chr10 59263725 59263814 -86325474 + A-rich Low_complexity Low_complexity 30 117 0 278 331 33 0 chr10 59263892 59264013 -86325275 - L1M4 LINE L1 -5720 926 802 267 294 95 43 chr10 59264310 59264541 -86324747 - L1M4 LINE L1 -6291 251 9 230 271 0 12 chr10 59264547 59264632 -86324656 - L1M4 LINE L1 -3782 2364 2281 2317 112 0 0 chr10 59265654 59265967 -86323321 + AluSq SINE Alu 1 313 0 1429 315 14 9 chr10 59266007 59266442 -86322846 + L1PA13 LINE L1 227 663 -6124 3854 250 29 35 chr10 59266498 59267968 -86321320 + L1PA13 LINE L1 1347 2824 -3973 2097 125 10 3 chr10 59267968 59268272 -86321016 + AluSx SINE Alu 1 306 -6 3854 250 29 35 chr10 59268272 59268531 -86320757 + L1PA13 LINE L1 2824 3083 -3714 225 0 0 0 chr10 59268531 59268556 -86320732 + (CA)n Simple_repeat Simple_repeat 2 26 0 3854 250 29 35 chr10 59268556 59268930 -86320358 + L1PA13 LINE L1 3083 3481 -3316 2306 95 3 3 chr10 59269594 59269890 -86319398 - AluY SINE Alu -15 296 1 8607 231 30 12 chr10 59269981 59272213 -86317075 + L1PA13 LINE L1 3510 5782 -1015 12730 213 42 32 chr10 59272339 59273803 -86315485 - HERVL74 LTR ERVL -1536 4149 2702 2071 125 92 31 chr10 59273803 59274227 -86315061 - LTR7 LTR ERV1 0 450 1 12730 213 42 32 chr10 59274227 59274589 -86314699 - HERVL74 LTR ERVL -2983 2702 2345 1487 199 131 65 chr10 59274589 59274750 -86314538 - LTR36 LTR ERV1 0 611 462 1695 134 20 0 chr10 59274750 59275027 -86314261 + AluSx SINE Alu 33 314 0 1487 199 131 65 chr10 59275027 59275437 -86313851 - LTR36 LTR ERV1 -149 462 1 12730 213 42 32 chr10 59275437 59276596 -86312692 - HERVL74 LTR ERVL -3340 2345 1131 339 154 0 0 chr10 59276722 59276787 -86312501 + CT-rich Low_complexity Low_complexity 3 67 0 519 323 76 40 chr10 59276821 59276991 -86312297 - HERVL74 LTR ERVL -4690 995 810 3689 120 19 73 chr10 59276991 59277672 -86311616 + LTR9B LTR ERV1 1 644 0 519 323 76 40 chr10 59277672 59277777 -86311511 - HERVL74 LTR ERVL -4875 810 710 324 322 8 25 chr10 59278357 59278478 -86310810 - HERVL74 LTR ERVL -5566 119 1 1285 218 41 8 chr10 59278534 59278870 -86310418 - MER74C LTR ERVL -47 413 3 21 36 0 0 chr10 59279123 59279151 -86310137 + AT_rich Low_complexity Low_complexity 1 28 0 441 251 67 74 chr10 59279173 59279521 -86309767 + L1M4c LINE L1 2246 2597 -3785 576 192 14 48 chr10 59279521 59279667 -86309621 + MLT1A1 LTR MaLR 1 141 -224 291 119 0 0 chr10 59279678 59279720 -86309568 - MER57-int LTR ERV1 -5096 2441 2400 * 1096 139 6 0 chr10 59279716 59279888 -86309400 + MER57-int LTR ERV1 2457 2629 -4908 773 142 16 0 chr10 59279884 59280011 -86309277 + MER57-int LTR ERV1 2781 2909 -4628 * 17252 123 17 14 chr10 59280011 59282804 -86306484 + MER57-int LTR ERV1 3012 5813 -1724 4395 193 127 16 chr10 59282804 59283779 -86305509 - MER52A LTR ERV1 0 1755 673 586 288 53 24 chr10 59284750 59285129 -86304159 + L1M4c LINE L1 3519 3908 -2474 289 291 20 20 chr10 59285256 59285404 -86303884 + L1M4c LINE L1 3907 4054 -2328 1197 277 39 19 chr10 59285481 59286840 -86302448 + L1M4c LINE L1 4327 5776 -626 322 355 44 33 chr10 59286859 59287042 -86302246 + MLT1A1 LTR MaLR 191 375 -215 272 130 93 0 chr10 59287737 59287791 -86301497 - U2 snRNA snRNA -129 59 1 25 51 0 0 chr10 59289632 59289671 -86299617 + AT_rich Low_complexity Low_complexity 1 39 0 251 330 38 0 chr10 59290171 59290277 -86299011 + L3b LINE CR1 1251 1360 -223 2149 168 58 7 chr10 59290321 59290731 -86298557 + MSTB1 LTR MaLR 2 432 0 21 36 0 0 chr10 59290832 59290860 -86298428 + AT_rich Low_complexity Low_complexity 1 28 0 1997 109 3 14 chr10 59291511 59291828 -86297460 + AluSg SINE Alu 1 314 0 425 83 71 0 chr10 59291951 59292035 -86297253 - Tigger7 DNA MER2_type -169 2318 2229 22 56 0 0 chr10 59292356 59292392 -86296896 + AT_rich Low_complexity Low_complexity 1 36 0 459 0 0 0 chr10 59292800 59292851 -86296437 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 27 49 0 0 chr10 59293722 59293763 -86295525 + AT_rich Low_complexity Low_complexity 1 41 0 2887 3 0 0 chr10 59293816 59294127 -86295161 + AluYa5 SINE Alu 1 311 0 263 141 84 99 chr10 59294646 59294717 -86294571 + MLT1A1 LTR MaLR 10 79 -286 25 65 0 0 chr10 59295118 59295164 -86294124 + AT_rich Low_complexity Low_complexity 1 46 0 2129 158 44 0 chr10 59295199 59295584 -86293704 + MER57A LTR ERV1 2 403 0 477 0 0 0 chr10 59295692 59295745 -86293543 + (TC)n Simple_repeat Simple_repeat 2 54 0 360 0 0 0 chr10 59295744 59295784 -86293504 + (TA)n Simple_repeat Simple_repeat 1 40 0 * 23 33 0 0 chr10 59296734 59296764 -86292524 + AT_rich Low_complexity Low_complexity 1 30 0 24 0 0 0 chr10 59296926 59296950 -86292338 + AT_rich Low_complexity Low_complexity 1 24 0 23 54 0 0 chr10 59297231 59297268 -86292020 + AT_rich Low_complexity Low_complexity 1 37 0 23 0 0 0 chr10 59297593 59297616 -86291672 + AT_rich Low_complexity Low_complexity 1 23 0 22 80 0 0 chr10 59298072 59298122 -86291166 + AT_rich Low_complexity Low_complexity 1 50 0 27 0 0 0 chr10 59298242 59298269 -86291019 + AT_rich Low_complexity Low_complexity 1 27 0 1996 109 3 14 chr10 59298474 59298801 -86290487 - AluSg SINE Alu 0 324 1 252 250 0 0 chr10 59299258 59299370 -86289918 + C-rich Low_complexity Low_complexity 1 112 0 2278 118 80 61 chr10 59299528 59300325 -86288963 + pTR5 LTR ERV1 66 2438 0 311 330 6 28 chr10 59300745 59300924 -86288364 + CT-rich Low_complexity Low_complexity 2 176 0 1246 139 14 23 chr10 59302793 59303009 -86286279 - LTR45B LTR ERV1 -98 391 178 813 87 0 35 chr10 59304001 59304116 -86285172 - AluSq SINE Alu -130 183 73 383 103 0 0 chr10 59304213 59304271 -86285017 + AluJ/FLAM SINE Alu 49 99 -203 306 0 0 0 chr10 59304289 59304323 -86284965 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 1463 211 21 29 chr10 59304403 59304777 -86284511 - MLT1A2 LTR MaLR 0 374 4 375 141 0 0 chr10 59307073 59307137 -86282151 - Alu SINE Alu -1 300 237 1143 196 62 111 chr10 59307282 59307813 -86281475 + MLT1D LTR MaLR 1 505 0 704 156 0 15 chr10 59307855 59307990 -86281298 - L1PA11 LINE L1 -2 6172 6040 473 96 14 0 chr10 59309948 59310021 -86279267 - Alu SINE Alu -3 306 233 1168 146 12 21 chr10 59310022 59310262 -86279026 + HERVH LTR ERV1 7475 7712 -1 240 281 46 7 chr10 59310317 59310470 -86278818 - L1MEc LINE L1 -4594 1802 1644 304 354 27 30 chr10 59310487 59310750 -86278538 + LTR16A LTR ERVL 183 444 -6 652 250 32 43 chr10 59311844 59312124 -86277164 - HERVH LTR ERV1 -282 7431 7155 * 3941 174 29 2 chr10 59312115 59312912 -86276376 - HERVH LTR ERV1 -1697 6016 5199 181 333 64 26 chr10 59313892 59313970 -86275318 - L3b LINE CR1 -57 1526 1446 207 0 0 0 chr10 59314074 59314097 -86275191 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 238 316 23 60 chr10 59314162 59314295 -86274993 - L2 LINE L2 -424 2890 2763 778 271 85 44 chr10 59314608 59314996 -86274292 + MLT1J2 LTR MaLR 43 446 -4 182 271 21 21 chr10 59315205 59315253 -86274035 - MIR SINE MIR -140 68 21 343 135 34 56 chr10 59315388 59315477 -86273811 + MER103 DNA DNA 1 87 -79 1065 281 156 34 chr10 59316059 59316095 -86273193 + L2 LINE L2 1398 1428 -1886 2182 153 0 15 chr10 59316095 59316434 -86272854 - MER1B DNA MER1_type -3 334 1 1065 281 156 34 chr10 59316434 59317185 -86272103 + L2 LINE L2 1428 2281 -1033 416 266 113 0 chr10 59317461 59317585 -86271703 - MIR SINE MIR -7 255 118 304 336 9 0 chr10 59317605 59317712 -86271576 + MIR SINE MIR 154 261 -1 770 158 0 16 chr10 59318632 59318759 -86270529 - AluJb SINE Alu -103 209 85 626 131 19 0 chr10 59319040 59319147 -86270141 + THE1C LTR MaLR 267 375 0 1722 196 68 29 chr10 59319282 59319725 -86269563 - LTR2B LTR ERV1 0 490 31 429 20 0 0 chr10 59319947 59319997 -86269291 + (CA)n Simple_repeat Simple_repeat 2 51 0 215 230 35 124 chr10 59320131 59320244 -86269044 + L2 LINE L2 3168 3270 -2 199 135 0 68 chr10 59321132 59321206 -86268082 + (CCCCCT)n Simple_repeat Simple_repeat 3 71 0 2778 258 27 2 chr10 59321386 59322026 -86267262 + L1M3de LINE L1 824 1479 -5174 2461 70 0 13 chr10 59322038 59322350 -86266938 + AluY SINE Alu 1 308 -3 26 30 0 0 chr10 59323563 59323596 -86265692 + AT_rich Low_complexity Low_complexity 1 33 0 205 250 0 0 chr10 59323842 59323886 -86265402 + GA-rich Low_complexity Low_complexity 3 46 0 1133 248 131 64 chr10 59324564 59325584 -86263704 + L1ME LINE L1 3515 4603 -1543 214 245 0 20 chr10 59325877 59325926 -86263362 + SUBTEL_sa Satellite Satellite 44 91 -83 1610 189 105 0 chr10 59326107 59326450 -86262838 + LTR51 LTR ERV1 293 671 0 28 29 0 0 chr10 59326966 59327001 -86262287 + AT_rich Low_complexity Low_complexity 1 35 0 1119 265 96 34 chr10 59327528 59328649 -86260639 + L1ME LINE L1 4600 5787 -379 205 286 53 38 chr10 59328653 59328786 -86260502 + MIR SINE MIR 128 262 0 192 241 0 0 chr10 59328788 59328846 -86260442 + (ATGGTG)n Simple_repeat Simple_repeat 5 62 0 22 35 0 0 chr10 59328879 59328908 -86260380 + AT_rich Low_complexity Low_complexity 1 29 0 32 57 0 0 chr10 59328994 59329047 -86260241 + AT_rich Low_complexity Low_complexity 1 53 0 6224 166 8 10 chr10 59331116 59332328 -86256960 - L1P LINE L1 -1579 4567 3358 2221 124 24 11 chr10 59332328 59332703 -86256585 + L1PA13 LINE L1 5778 6160 -3 38 39 0 0 chr10 59333353 59333405 -86255883 + AT_rich Low_complexity Low_complexity 1 52 0 192 343 61 30 chr10 59334295 59334394 -86254894 + L2 LINE L2 1068 1169 -2145 30 45 0 0 chr10 59334419 59334463 -86254825 + AT_rich Low_complexity Low_complexity 1 44 0 184 296 31 51 chr10 59334494 59334592 -86254696 + L2 LINE L2 1325 1420 -1894 333 290 14 28 chr10 59334925 59335070 -86254218 - L1MC4 LINE L1 -210 7832 7690 2029 150 0 6 chr10 59338026 59338340 -86250948 + AluSx SINE Alu 1 312 0 903 202 62 55 chr10 59338702 59338974 -86250314 - MLT1A1 LTR MaLR -82 283 10 581 150 71 0 chr10 59338983 59339110 -86250178 - MLT1A1-int LTR MaLR 0 1735 1600 326 169 70 0 chr10 59339112 59339183 -86250105 + MLT1A2 LTR MaLR 298 373 -1 2548 227 44 11 chr10 59339185 59339697 -86249591 + MLT1A2-int LTR MaLR 2 541 -1194 272 27 27 0 chr10 59339697 59339734 -86249554 + (TA)n Simple_repeat Simple_repeat 2 39 0 2548 227 44 11 chr10 59339734 59339859 -86249429 + MLT1A2-int LTR MaLR 541 660 -1075 1663 181 65 31 chr10 59340218 59340605 -86248683 + MLT1A2-int LTR MaLR 1314 1713 -22 2243 99 6 26 chr10 59340677 59340990 -86248298 - AluSx SINE Alu 0 312 6 215 319 42 0 chr10 59341408 59341480 -86247808 + L2 LINE L2 3190 3264 -8 372 176 0 0 chr10 59341719 59341787 -86247501 + MLT1A2-int LTR MaLR 1655 1722 -13 204 261 174 11 chr10 59342289 59342381 -86246907 + L2 LINE L2 3197 3303 -10 651 296 44 30 chr10 59342504 59342768 -86246520 - L1MEc LINE L1 -5936 460 186 2197 90 27 3 chr10 59342768 59343069 -86246219 - AluSc SINE Alu -1 308 1 651 296 44 30 chr10 59343069 59343210 -86246078 - L1MEc LINE L1 -6210 186 49 21 0 0 0 chr10 59343277 59343298 -86245990 + AT_rich Low_complexity Low_complexity 1 21 0 325 273 41 25 chr10 59343305 59343426 -86245862 + L1MCa LINE L1 1435 1557 -4869 1651 274 108 27 chr10 59343432 59344259 -86245029 - L1M4 LINE L1 -2408 3738 2756 2256 75 3 16 chr10 59344259 59344565 -86244723 - AluY SINE Alu -9 302 1 1651 274 108 27 chr10 59344565 59345105 -86244183 - L1M4 LINE L1 -3390 2756 2261 1975 97 33 6 chr10 59345186 59345575 -86243713 + LTR7 LTR ERV1 1 450 0 13284 133 9 20 chr10 59345575 59348290 -86240998 + HERVH LTR ERV1 1 2995 -4718 3127 164 7 15 chr10 59348269 59348871 -86240417 + HERVH LTR ERV1 3140 3736 -3977 * 3724 151 3 2 chr10 59348861 59349522 -86239766 + HERVH LTR ERV1 3956 4624 -2850 402 57 0 0 chr10 59350217 59350270 -86239018 + (CA)n Simple_repeat Simple_repeat 1 53 0 224 302 0 0 chr10 59350810 59350863 -86238425 + (CATA)n Simple_repeat Simple_repeat 3 55 0 270 200 40 13 chr10 59351108 59351183 -86238105 - Charlie8 DNA MER1_type -1926 491 415 198 0 0 0 chr10 59351190 59351212 -86238076 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 453 124 94 4 chr10 59351218 59351335 -86237953 + MLT-int LTR MaLR 1202 1694 -41 1342 118 0 0 chr10 59351342 59351520 -86237768 - AluSq SINE Alu -72 241 64 3431 91 4 0 chr10 59351762 59352213 -86237075 + MLT2A2 LTR ERVL 1 453 0 194 282 118 12 chr10 59352656 59352741 -86236547 - MIR SINE MIR -1 261 168 265 267 164 68 chr10 59353482 59353793 -86235495 + MLT1H LTR MaLR 209 549 0 321 26 0 0 chr10 59356082 59356120 -86233168 + (TG)n Simple_repeat Simple_repeat 1 38 0 1245 250 93 62 chr10 59356141 59356421 -86232867 + L1ME3A LINE L1 5338 5608 -562 912 28 49 7 chr10 59356421 59356564 -86232724 + (TAGA)n Simple_repeat Simple_repeat 3 151 0 1245 250 93 62 chr10 59356564 59357091 -86232197 + L1ME3A LINE L1 5608 6170 0 226 342 26 18 chr10 59357804 59357918 -86231370 + Charlie8 DNA MER1_type 129 243 -2174 652 149 58 0 chr10 59357918 59358039 -86231249 + L1MA7 LINE L1 6125 6252 -39 22 80 0 0 chr10 59358198 59358248 -86231040 + AT_rich Low_complexity Low_complexity 1 50 0 2636 16 3 3 chr10 59359343 59359647 -86229641 - AluYb8 SINE Alu -14 304 1 2127 132 0 0 chr10 59360512 59360815 -86228473 - AluSx SINE Alu -9 303 1 670 226 72 67 chr10 59361914 59362122 -86227166 - MER20 DNA MER1_type -9 210 2 1521 171 51 41 chr10 59362259 59362551 -86226737 + AluJo SINE Alu 1 295 -17 629 259 118 21 chr10 59362919 59363251 -86226037 - L1MEc LINE L1 -4042 2354 1991 309 309 105 26 chr10 59363357 59363548 -86225740 + L1MDa LINE L1 1764 1969 -4571 525 257 142 23 chr10 59363557 59363860 -86225428 + L1MDa LINE L1 1963 2301 -4420 969 276 56 36 chr10 59363876 59364421 -86224867 + MLT2F LTR ERVL 2 595 -68 189 213 0 0 chr10 59364464 59364511 -86224777 + (CATATA)n Simple_repeat Simple_repeat 6 52 0 280 298 54 7 chr10 59365041 59365188 -86224100 - MIR3 SINE MIR -71 137 2 2340 107 0 0 chr10 59365798 59366108 -86223180 - AluSx SINE Alu -2 310 1 249 356 59 0 chr10 59366744 59366879 -86222409 - MIR SINE MIR -73 189 47 1452 197 3 36 chr10 59366887 59367191 -86222097 + AluJo SINE Alu 6 299 -13 22 35 0 0 chr10 59367974 59368003 -86221285 + AT_rich Low_complexity Low_complexity 1 29 0 1430 193 9 37 chr10 59368589 59368910 -86220378 + AluJo SINE Alu 1 312 0 1004 182 93 108 chr10 59369082 59369537 -86219751 + LTR28 LTR ERV1 10 577 -443 4027 138 6 8 chr10 59369664 59370333 -86218955 - L1PA10 LINE L1 -115 6053 5386 2926 251 36 10 chr10 59370330 59371281 -86218007 - L1 LINE L1 -2962 4205 3229 * 249 196 0 0 chr10 59371281 59371332 -86217956 + (TA)n Simple_repeat Simple_repeat 1 51 0 348 106 0 0 chr10 59371332 59371379 -86217909 - L1P4 LINE L1 -575 5593 5547 * 6218 272 66 24 chr10 59371363 59374752 -86214536 - L1 LINE L1 -3950 3217 2 23 33 0 0 chr10 59375210 59375240 -86214048 + AT_rich Low_complexity Low_complexity 1 30 0 503 244 24 8 chr10 59375362 59375485 -86213803 - MER3 DNA MER1_type -84 125 1 493 325 125 60 chr10 59375496 59376247 -86213041 - L3 LINE CR1 -285 1292 493 227 240 0 0 chr10 59376662 59376712 -86212576 + (TG)n Simple_repeat Simple_repeat 1 50 0 313 291 97 15 chr10 59376795 59376828 -86212460 - L1MD2 LINE L1 -176 6183 6154 243 0 0 0 chr10 59376828 59376855 -86212433 + (TG)n Simple_repeat Simple_repeat 1 27 0 313 291 97 15 chr10 59376855 59376955 -86212333 - L1MD2 LINE L1 -205 6154 6039 21 36 0 0 chr10 59378994 59379022 -86210266 + AT_rich Low_complexity Low_complexity 1 28 0 1335 124 0 5 chr10 59379322 59379531 -86209757 + L1PB1 LINE L1 5942 6149 -2 1533 146 20 156 chr10 59380561 59381060 -86208228 - L1MC3 LINE L1 -8 7777 7347 514 276 131 4 chr10 59381060 59381335 -86207953 - L1M4 LINE L1 -873 5273 4964 376 143 37 12 chr10 59381343 59381504 -86207784 + (TA)n Simple_repeat Simple_repeat 2 166 0 1016 157 21 0 chr10 59381528 59381719 -86207569 - L1MA5 LINE L1 -2 6298 6104 1102 201 47 10 chr10 59381719 59381813 -86207475 - L1M4 LINE L1 -1206 4940 4851 6028 171 24 24 chr10 59381813 59383044 -86206244 + Tigger3b DNA MER2_type 1 1231 0 1102 201 47 10 chr10 59383044 59383248 -86206040 - L1M4 LINE L1 -1295 4851 4631 724 284 32 11 chr10 59383257 59383542 -86205746 - L1MCa LINE L1 -3245 3181 2891 785 285 66 11 chr10 59383563 59383837 -86205451 - L1MCa LINE L1 -5832 594 306 539 260 80 10 chr10 59383878 59384078 -86205210 - L1MCa LINE L1 -6202 224 11 207 0 0 0 chr10 59384234 59384257 -86205031 + (CA)n Simple_repeat Simple_repeat 2 24 0 34 55 0 0 chr10 59384513 59384568 -86204720 + AT_rich Low_complexity Low_complexity 1 55 0 243 349 36 48 chr10 59384637 59384803 -86204485 + MIR SINE MIR 99 262 0 195 377 28 9 chr10 59384809 59384915 -86204373 + L3b LINE CR1 1340 1447 -136 2125 110 14 0 chr10 59385079 59385371 -86203917 + AluSq SINE Alu 1 296 -17 181 191 32 0 chr10 59386349 59386403 -86202885 + (TA)n Simple_repeat Simple_repeat 2 60 -6 548 101 0 0 chr10 59386403 59386482 -86202806 - MADE1 DNA Mariner 0 80 2 181 191 32 0 chr10 59386482 59386490 -86202798 + (TA)n Simple_repeat Simple_repeat 60 66 0 26 30 0 0 chr10 59386851 59386884 -86202404 + AT_rich Low_complexity Low_complexity 1 33 0 261 192 55 0 chr10 59387025 59387098 -86202190 + AluJ/FRAM SINE Alu 226 302 0 24 0 0 0 chr10 59387131 59387155 -86202133 + AT_rich Low_complexity Low_complexity 1 24 0 24 32 0 0 chr10 59387377 59387408 -86201880 + AT_rich Low_complexity Low_complexity 1 31 0 895 115 64 6 chr10 59387430 59387587 -86201701 - L1MA3 LINE L1 -108 6197 6032 2831 157 48 11 chr10 59387982 59388506 -86200782 + Tigger3b DNA MER2_type 689 1231 0 361 228 50 0 chr10 59388510 59388611 -86200677 - L1M4 LINE L1 -1312 4834 4729 * 4093 193 23 16 chr10 59388604 59389485 -86199803 + L1MB3 LINE L1 5255 6141 -42 44 46 0 0 chr10 59389497 59389562 -86199726 + AT_rich Low_complexity Low_complexity 1 65 0 649 232 48 99 chr10 59389623 59390123 -86199165 + L1MCa LINE L1 836 1360 -5066 2263 60 7 27 chr10 59390123 59390424 -86198864 + AluY SINE Alu 1 295 -16 333 68 0 0 chr10 59390424 59390468 -86198820 + (TA)n Simple_repeat Simple_repeat 2 45 0 649 232 48 99 chr10 59390468 59390573 -86198715 + L1MCa LINE L1 1358 1411 -5015 233 167 19 0 chr10 59390588 59390642 -86198646 + CT-rich Low_complexity Low_complexity 1 55 0 462 309 89 37 chr10 59390654 59391118 -86198170 + L1MCa LINE L1 1608 2127 -4480 2228 117 0 0 chr10 59391118 59391416 -86197872 + AluSg SINE Alu 1 298 -12 462 309 89 37 chr10 59391416 59391705 -86197583 + L1MCa LINE L1 2127 2400 -4207 276 231 0 0 chr10 59391756 59391798 -86197490 - MLT2C2 LTR ERVL 0 464 420 204 40 0 0 chr10 59391798 59391823 -86197465 + (CA)n Simple_repeat Simple_repeat 2 26 0 276 231 0 0 chr10 59391823 59391845 -86197443 - MLT2C2 LTR ERVL -43 421 400 * 331 303 34 0 chr10 59391824 59391913 -86197375 - MLT2B1 LTR ERVL -289 231 140 1220 251 74 58 chr10 59391983 59392120 -86197168 + L1MCa LINE L1 2435 2568 -3858 611 232 0 0 chr10 59392120 59392245 -86197043 + FLAM_A SINE Alu 5 129 -4 1220 251 74 58 chr10 59392245 59392328 -86196960 + L1MCa LINE L1 2568 2648 -3778 2222 84 0 3 chr10 59392328 59392615 -86196673 + AluY SINE Alu 1 286 -25 1220 251 74 58 chr10 59392615 59393466 -86195822 + L1MCa LINE L1 2648 3590 -2836 2640 247 33 16 chr10 59393731 59395135 -86194153 + L1PB2 LINE L1 2380 6009 -142 * 5762 91 3 0 chr10 59394508 59395289 -86193999 + L1PA10 LINE L1 5386 6168 0 * 8291 230 18 11 chr10 59395264 59397881 -86191407 + L1MA9 LINE L1 3134 5771 -541 648 261 52 0 chr10 59397902 59398055 -86191233 - MLT1G1 LTR MaLR -434 161 1 414 279 95 32 chr10 59398060 59398096 -86191192 + L1MCa LINE L1 3577 3609 -2817 314 100 88 88 chr10 59398096 59398176 -86191112 + MADE1 DNA Mariner 1 80 0 414 279 95 32 chr10 59398176 59398329 -86190959 + L1MCa LINE L1 3609 3778 -2648 25 51 0 0 chr10 59398965 59399004 -86190284 + AT_rich Low_complexity Low_complexity 1 39 0 1339 201 185 25 chr10 59399098 59399536 -86189752 + L1MA9 LINE L1 5767 6274 -38 336 24 0 0 chr10 59399892 59399933 -86189355 + (CA)n Simple_repeat Simple_repeat 2 42 0 316 128 13 51 chr10 59400856 59400934 -86188354 - L1PA10 LINE L1 -1 6167 6093 268 267 52 9 chr10 59403262 59403378 -86185910 - L1ME4a LINE L1 -21 6100 5980 26 30 0 0 chr10 59405022 59405055 -86184233 + AT_rich Low_complexity Low_complexity 1 33 0 208 139 28 0 chr10 59406258 59406294 -86182994 + (CA)n Simple_repeat Simple_repeat 2 38 0 271 347 36 54 chr10 59406639 59406861 -86182427 + MIR SINE MIR 2 219 -43 1531 189 51 111 chr10 59406866 59407445 -86181843 - MER67C LTR ERV1 -4 510 1 724 273 34 52 chr10 59407696 59408077 -86181211 + MLT1A2 LTR MaLR 1 374 0 494 276 12 65 chr10 59408178 59408348 -86180940 - MIR SINE MIR -2 260 100 21 57 0 0 chr10 59408873 59408908 -86180380 + AT_rich Low_complexity Low_complexity 1 35 0 28 48 0 0 chr10 59408965 59409007 -86180281 + AT_rich Low_complexity Low_complexity 1 42 0 371 268 42 47 chr10 59409075 59409242 -86180046 + L1ME LINE L1 5434 5602 -560 250 340 45 13 chr10 59409246 59409402 -86179886 + L1ME LINE L1 5640 5800 -370 681 255 15 10 chr10 59409413 59409617 -86179671 - MER3 DNA MER1_type -4 205 1 751 206 0 0 chr10 59409777 59409908 -86179380 + FLAM_C SINE Alu 3 133 0 2803 213 25 10 chr10 59410030 59410703 -86178585 - L1MB2 LINE L1 0 6171 5489 2307 111 23 14 chr10 59411879 59412231 -86177057 + THE1A LTR MaLR 1 355 0 22 0 0 0 chr10 59413143 59413165 -86176123 + AT_rich Low_complexity Low_complexity 1 22 0 3505 221 52 12 chr10 59413298 59413786 -86175502 - L1MC1 LINE L1 -6 6327 5860 2902 150 35 6 chr10 59413786 59414273 -86175015 - MER61D LTR ERV1 0 501 1 3505 221 52 12 chr10 59414273 59414704 -86174584 - L1MC1 LINE L1 -473 5860 5388 3071 123 13 48 chr10 59415302 59415955 -86173333 - MER4B LTR ERV1 0 779 2 1242 201 109 6 chr10 59416232 59416668 -86172620 - LTR36 LTR ERV1 0 611 54 29 0 0 0 chr10 59419871 59419900 -86169388 + AT_rich Low_complexity Low_complexity 1 29 0 33 43 0 0 chr10 59420140 59420187 -86169101 + AT_rich Low_complexity Low_complexity 1 47 0 22 35 0 0 chr10 59420370 59420399 -86168889 + AT_rich Low_complexity Low_complexity 1 29 0 965 219 135 42 chr10 59420434 59420767 -86168521 - MLT1A1 LTR MaLR -1 364 1 183 42 0 0 chr10 59420774 59420798 -86168490 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 1661 143 55 0 chr10 59420800 59421072 -86168216 - AluSx SINE Alu -25 287 1 249 33 0 0 chr10 59421287 59421317 -86167971 + (TG)n Simple_repeat Simple_repeat 2 31 0 22 0 0 0 chr10 59421548 59421570 -86167718 + AT_rich Low_complexity Low_complexity 1 22 0 285 29 0 0 chr10 59421577 59421611 -86167677 + (TG)n Simple_repeat Simple_repeat 2 35 0 2486 40 3 0 chr10 59422627 59422924 -86166364 - AluY SINE Alu -13 298 1 223 240 107 27 chr10 59423296 59423371 -86165917 - L2 LINE L2 -3 3310 3230 1100 150 21 60 chr10 59423392 59423625 -86165663 + Tigger2a DNA MER2_type 1 224 -210 2710 155 24 2 chr10 59423644 59424095 -86165193 - L1PA16 LINE L1 -4 6162 5702 2251 220 11 0 chr10 59424095 59424618 -86164670 + L1 LINE L1 4305 4833 -1313 1853 123 18 0 chr10 59424623 59424930 -86164358 - AluSg SINE Alu 0 312 1 1099 204 23 0 chr10 59424930 59425146 -86164142 + Tigger2a DNA MER2_type 223 443 -1 312 383 16 5 chr10 59427287 59427480 -86161808 + L1MEc LINE L1 107 301 -6095 1474 210 30 57 chr10 59427506 59427944 -86161344 - L1MA8 LINE L1 -1135 5011 4586 2179 186 45 18 chr10 59427946 59428021 -86161267 + L1MA8 LINE L1 5018 5089 -1202 2338 183 119 33 chr10 59428021 59428594 -86160694 - LTR29 LTR ERV1 0 622 1 2179 186 45 18 chr10 59428594 59429179 -86160109 + L1MA8 LINE L1 5089 5693 -598 781 258 57 22 chr10 59429179 59429517 -86159771 - LTR35 LTR ERV1 0 677 336 2998 168 24 5 chr10 59429757 59430173 -86159115 + L1MA8 LINE L1 5688 6120 -171 4421 132 51 9 chr10 59430173 59430921 -86158367 + MER4E LTR ERV1 1 779 0 2998 168 24 5 chr10 59430921 59431093 -86158195 + L1MA8 LINE L1 6120 6287 -4 3464 95 4 0 chr10 59431137 59431621 -86157667 - LTR19A LTR ERV1 0 486 1 220 271 35 0 chr10 59431661 59431746 -86157542 + (TA)n Simple_repeat Simple_repeat 2 89 0 1031 252 95 35 chr10 59431948 59432738 -86156550 - L1ME LINE L1 -478 5686 4847 1145 214 121 21 chr10 59433221 59433552 -86155736 - MLT1A1 LTR MaLR -1 364 1 282 256 62 85 chr10 59434044 59434173 -86155115 + MIR SINE MIR 51 151 -57 3974 55 2 2 chr10 59434278 59434788 -86154500 - L1PA7 LINE L1 -6 6148 5639 1387 270 59 15 chr10 59434790 59435267 -86154021 - Charlie1a DNA MER1_type -955 500 3 483 295 137 29 chr10 59435387 59435729 -86153559 - ERVL LTR ERVL -3188 2576 2198 189 0 0 0 chr10 59437271 59437292 -86151996 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 180 341 47 0 chr10 59437361 59437446 -86151842 + MIR SINE MIR 100 188 -74 25 31 0 0 chr10 59437602 59437634 -86151654 + AT_rich Low_complexity Low_complexity 1 32 0 1836 138 44 73 chr10 59437852 59438236 -86151052 + THE1C LTR MaLR 1 373 -2 4051 41 0 0 chr10 59438792 59439277 -86150011 - L1PA5 LINE L1 -2 6152 5668 10662 225 79 9 chr10 59440450 59442188 -86147100 - L1PA16 LINE L1 -2 6221 4605 403 54 43 174 chr10 59442188 59442280 -86147008 + MADE1 DNA Mariner 1 80 0 10662 225 79 9 chr10 59442280 59443389 -86145899 - L1PA16 LINE L1 -1618 4605 3574 1943 147 72 26 chr10 59443389 59443737 -86145551 + THE1B LTR MaLR 1 364 0 10662 225 79 9 chr10 59443737 59446005 -86143283 - L1PA16 LINE L1 -2649 3574 727 245 308 151 14 chr10 59446067 59446213 -86143075 - L1PA16 LINE L1 -5645 559 394 251 313 96 66 chr10 59446424 59446696 -86142592 - L1M2 LINE L1 -5772 1077 798 405 281 18 0 chr10 59447661 59447775 -86141513 - L1M2 LINE L1 -6724 125 10 828 10 0 0 chr10 59448230 59448327 -86140961 - L1PA2 LINE L1 0 6155 6059 236 314 48 29 chr10 59448550 59448655 -86140633 - MIR SINE MIR -106 156 50 21 0 0 0 chr10 59448705 59448726 -86140562 + AT_rich Low_complexity Low_complexity 1 21 0 232 312 64 28 chr10 59449048 59449157 -86140131 + L2 LINE L2 2948 3060 -212 289 190 20 0 chr10 59450345 59450445 -86138843 + (TA)n Simple_repeat Simple_repeat 2 103 0 281 318 99 11 chr10 59450764 59451129 -86138159 - L1M4 LINE L1 -2205 3941 3545 313 255 147 52 chr10 59451500 59451751 -86137537 - L1M4 LINE L1 -2377 3769 3495 225 94 0 0 chr10 59452372 59452404 -86136884 + (TG)n Simple_repeat Simple_repeat 2 33 0 183 80 0 0 chr10 59454574 59454599 -86134689 + (CAT)n Simple_repeat Simple_repeat 3 27 0 435 370 92 27 chr10 59455228 59455523 -86133765 + L1PBb LINE L1 11 324 -6526 606 305 38 28 chr10 59455936 59456254 -86133034 + L1PBb LINE L1 699 1019 -5831 2575 221 26 122 chr10 59456530 59457706 -86131582 + L1PBb LINE L1 1263 2326 -4523 6591 236 44 16 chr10 59457721 59459193 -86130095 + L1 LINE L1 2873 4444 -2405 354 23 0 0 chr10 59459193 59459236 -86130052 + (CA)n Simple_repeat Simple_repeat 1 43 0 6591 236 44 16 chr10 59459236 59460203 -86129085 + L1 LINE L1 4444 5382 -1467 2218 153 0 8 chr10 59460212 59460578 -86128710 + L1PB4 LINE L1 5792 6154 -2 262 214 107 24 chr10 59460983 59461067 -86128221 + MIR SINE MIR 114 204 -58 491 257 0 0 chr10 59461415 59461524 -86127764 + L1P LINE L1 4519 4627 -1519 2235 104 159 143 chr10 59461977 59462643 -86126645 - LTR12 LTR ERV1 -124 2032 57 227 250 0 0 chr10 59462647 59462699 -86126589 - LTR30 LTR ERV1 -670 52 1 1971 186 49 17 chr10 59462783 59463192 -86126096 - MSTB LTR MaLR -3 423 2 213 39 0 0 chr10 59463224 59463250 -86126038 + (TC)n Simple_repeat Simple_repeat 1 26 0 * 219 36 0 0 chr10 59463249 59463277 -86126011 + (CA)n Simple_repeat Simple_repeat 1 28 0 2455 251 27 12 chr10 59463331 59463928 -86125360 - MER90 LTR ERV1 0 614 9 315 302 31 31 chr10 59465428 59465524 -86123764 + MER91A DNA MER1_type 50 145 -51 215 271 68 17 chr10 59465552 59465611 -86123677 + MER91A DNA MER1_type 127 188 -8 10360 115 7 30 chr10 59466865 59469309 -86119979 + L1PA8 LINE L1 3776 6172 0 8085 199 38 8 chr10 59469334 59470905 -86118383 + MSTB-int LTR MaLR 34 1650 -1 1921 202 78 2 chr10 59470906 59471302 -86117986 + MSTB LTR MaLR 1 426 0 768 174 0 8 chr10 59471791 59471923 -86117365 + FLAM_C SINE Alu 3 133 0 12701 168 92 96 chr10 59471931 59475486 -86113802 - L1P LINE L1 -2605 3541 2 243 203 34 0 chr10 59475476 59475535 -86113753 - MSTB-int LTR MaLR -1590 61 1 * 2056 192 26 5 chr10 59475535 59475952 -86113336 - MSTB LTR MaLR 0 426 1 376 123 62 0 chr10 59476813 59476878 -86112410 + L1P LINE L1 2144 2212 -3934 22 0 0 0 chr10 59477712 59477734 -86111554 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr10 59478353 59478383 -86110905 + AT_rich Low_complexity Low_complexity 1 30 0 1947 141 3 0 chr10 59479590 59479914 -86109374 - AluSx SINE Alu 0 312 1 1377 177 22 35 chr10 59481178 59481494 -86107794 - AluJb SINE Alu 0 312 1 2535 71 0 0 chr10 59481736 59482045 -86107243 + AluSc SINE Alu 1 309 0 31 0 0 0 chr10 59482517 59482548 -86106740 + AT_rich Low_complexity Low_complexity 1 31 0 4824 135 55 0 chr10 59482682 59482892 -86106396 - L1PA15 LINE L1 -5 6160 5963 1848 144 146 8 chr10 59482892 59483268 -86106020 + MSTA LTR MaLR 1 428 0 4824 135 55 0 chr10 59483268 59483985 -86105303 - L1PA15 LINE L1 -202 5963 5191 315 346 15 8 chr10 59484131 59484261 -86105027 - L2 LINE L2 -8 3305 3175 23 68 0 0 chr10 59484783 59484827 -86104461 + AT_rich Low_complexity Low_complexity 1 44 0 3625 198 21 18 chr10 59484888 59486016 -86103272 + L1MA5 LINE L1 4559 5683 -617 2128 152 66 29 chr10 59486019 59486473 -86102815 + L1MA5 LINE L1 5820 6290 -10 230 245 0 0 chr10 59487210 59487263 -86102025 + (TATATG)n Simple_repeat Simple_repeat 4 56 0 2295 265 39 13 chr10 59487278 59487893 -86101395 - MER82 DNA MER2_type 0 653 23 392 0 21 0 chr10 59487904 59487952 -86101336 + (TCTA)n Simple_repeat Simple_repeat 3 51 0 607 267 17 6 chr10 59487971 59488147 -86101141 + L1M3 LINE L1 4558 4735 -1411 180 0 0 0 chr10 59488152 59488172 -86101116 + (TTTA)n Simple_repeat Simple_repeat 4 23 0 916 133 0 46 chr10 59488172 59488323 -86100965 - AluSg/x SINE Alu -32 280 137 3180 137 53 34 chr10 59488543 59489126 -86100162 + LTR1 LTR ERV1 192 785 0 687 225 0 18 chr10 59489131 59489300 -86099988 + L1M3 LINE L1 4787 4952 -1194 * 1192 223 66 39 chr10 59489297 59489706 -86099582 - L1M4c LINE L1 -5048 1336 917 532 192 57 78 chr10 59489701 59489894 -86099394 + L1M3 LINE L1 5285 5473 -707 * 183 80 0 0 chr10 59489895 59489920 -86099368 + (T)n Simple_repeat Simple_repeat 1 25 0 641 115 197 8 chr10 59489923 59490045 -86099243 + MSTA LTR MaLR 45 189 -239 1257 204 110 40 chr10 59490156 59490583 -86098705 - MSTB2 LTR MaLR 0 457 1 353 188 49 76 chr10 59491664 59491808 -86097480 - L1ME LINE L1 -704 5460 5321 331 264 77 71 chr10 59491868 59492050 -86097238 + L1ME3A LINE L1 3665 3847 -2299 22 56 0 0 chr10 59492091 59492127 -86097161 + AT_rich Low_complexity Low_complexity 1 36 0 2239 84 0 7 chr10 59492168 59492467 -86096821 - THE1C LTR MaLR -78 297 1 230 328 62 8 chr10 59492590 59492718 -86096570 + L1ME3A LINE L1 4805 4939 -1207 * 990 302 41 47 chr10 59492714 59493373 -86095915 + L1ME3A LINE L1 5381 6035 -135 398 294 67 10 chr10 59493383 59493577 -86095711 - L1ME2 LINE L1 -245 6313 6109 549 304 43 37 chr10 59493580 59493906 -86095382 - L1ME2 LINE L1 -4109 2612 2285 401 280 92 40 chr10 59494165 59494490 -86094798 - L1ME2 LINE L1 -4612 1928 1587 1177 202 91 0 chr10 59494491 59494743 -86094545 - L1PA16 LINE L1 -2 6164 5890 258 81 0 0 chr10 59496259 59496296 -86092992 + (TG)n Simple_repeat Simple_repeat 2 38 0 31 26 0 0 chr10 59496735 59496773 -86092515 + AT_rich Low_complexity Low_complexity 1 38 0 381 325 85 20 chr10 59496792 59496992 -86092296 - MIR SINE MIR -1 261 49 1585 261 91 0 chr10 59497043 59497503 -86091785 + L1MDa LINE L1 24 525 -6015 394 258 26 19 chr10 59497596 59497751 -86091537 - MER104 DNA Tc2 -24 156 1 220 284 78 29 chr10 59497825 59497927 -86091361 - MIR SINE MIR -79 129 23 2211 105 3 3 chr10 59498757 59499062 -86090226 - AluSq SINE Alu -8 305 1 1701 264 72 38 chr10 59500640 59501499 -86087789 - MER97a DNA MER1_type? 0 894 7 224 214 0 0 chr10 59501911 59501953 -86087335 + (CA)n Simple_repeat Simple_repeat 1 42 0 1094 259 70 42 chr10 59502208 59502567 -86086721 - MLT1E LTR MaLR 0 593 225 663 242 4 57 chr10 59503399 59503647 -86085641 - L1ME2 LINE L1 -192 5972 5738 26 30 0 0 chr10 59503875 59503908 -86085380 + AT_rich Low_complexity Low_complexity 1 33 0 7186 222 36 40 chr10 59503908 59504112 -86085176 - L1MA9 LINE L1 -38 6274 6071 1990 99 0 80 chr10 59504112 59504426 -86084862 - AluSc SINE Alu -20 289 1 7186 222 36 40 chr10 59504426 59505068 -86084220 - L1MA9 LINE L1 -241 6071 5428 1469 92 31 123 chr10 59505068 59505414 -86083874 + AluYb8 SINE Alu 1 317 0 7186 222 36 40 chr10 59505414 59507050 -86082238 - L1MA9 LINE L1 -884 5428 3796 2094 80 0 7 chr10 59507050 59507359 -86081929 + AluY SINE Alu 11 317 0 7186 222 36 40 chr10 59507359 59507950 -86081338 - L1MA9 LINE L1 -2516 3796 3204 13070 106 13 5 chr10 59507950 59508075 -86081213 + L1PA8 LINE L1 3381 3504 -2668 210 37 0 0 chr10 59508075 59508102 -86081186 + (CAA)n Simple_repeat Simple_repeat 1 27 0 13070 106 13 5 chr10 59508102 59508784 -86080504 + L1PA8 LINE L1 3504 4180 -1992 2467 71 0 7 chr10 59508784 59509093 -86080195 - AluY SINE Alu -4 307 1 13070 106 13 5 chr10 59509093 59511061 -86078227 + L1PA8 LINE L1 4180 6172 0 1366 260 90 11 chr10 59511058 59511230 -86078058 - L1MA9 LINE L1 -2937 3209 3052 * 1810 197 24 15 chr10 59511230 59511570 -86077718 + MER61A LTR ERV1 1 343 0 1366 260 90 11 chr10 59511570 59512009 -86077279 - L1MA9 LINE L1 -3094 3052 2550 411 38 0 0 chr10 59512279 59512332 -86076956 + (TG)n Simple_repeat Simple_repeat 1 53 0 231 103 0 0 chr10 59512672 59512711 -86076577 + (TG)n Simple_repeat Simple_repeat 2 40 0 1865 143 18 0 chr10 59512952 59513232 -86076056 - AluY SINE Alu -21 290 6 365 278 42 0 chr10 59514291 59514435 -86074853 + L1MD2 LINE L1 6194 6343 -16 21 0 0 0 chr10 59514725 59514746 -86074542 + AT_rich Low_complexity Low_complexity 1 21 0 1236 201 166 42 chr10 59515320 59515748 -86073540 + MLT1D LTR MaLR 1 481 -24 1642 201 87 17 chr10 59516141 59516544 -86072744 + MSTB1 LTR MaLR 1 431 -1 186 234 21 0 chr10 59516829 59516876 -86072412 - MIR SINE MIR -126 136 89 2124 114 3 3 chr10 59516883 59517182 -86072106 - AluSg SINE Alu -1 309 11 472 269 112 0 chr10 59519336 59519578 -86069710 + LTR37B LTR ERV1 198 466 -2 2292 110 7 0 chr10 59520146 59520455 -86068833 - AluSp SINE Alu -1 312 2 38 22 0 0 chr10 59520846 59520891 -86068397 + AT_rich Low_complexity Low_complexity 1 45 0 527 284 36 52 chr10 59521089 59521283 -86068005 - MIR SINE MIR -15 247 57 510 310 13 0 chr10 59521348 59521503 -86067785 + MLT1F LTR MaLR 2 158 -384 563 249 5 27 chr10 59521503 59521688 -86067600 - L1M4 LINE L1 -1034 5112 4932 * 1388 265 47 35 chr10 59521682 59522551 -86066737 - L1MCa LINE L1 -2512 4052 3173 1120 224 48 21 chr10 59522601 59522745 -86066543 - L1MCa LINE L1 -5141 1423 1284 1753 78 4 17 chr10 59522745 59522976 -86066312 - AluY SINE Alu -18 293 66 1120 224 48 21 chr10 59522976 59523264 -86066024 - L1MCa LINE L1 -5280 1284 979 677 23 0 0 chr10 59523263 59523350 -86065938 - L1P LINE L1 -953 5193 5107 * 4866 51 3 2 chr10 59523350 59523955 -86065333 + L1PA5 LINE L1 5545 6150 -4 1772 244 34 25 chr10 59523983 59524540 -86064748 - L1MCa LINE L1 -5066 979 418 1465 200 0 0 chr10 59524567 59524862 -86064426 + L1MD2 LINE L1 5682 5976 -383 1041 247 67 22 chr10 59524862 59525218 -86064070 - MLT2B1 LTR ERVL -148 372 1 227 323 109 9 chr10 59525279 59525508 -86063780 - L1MEc LINE L1 -4435 2687 2436 416 273 104 21 chr10 59526041 59526330 -86062958 - L1MEc LINE L1 -6001 422 110 2092 131 7 7 chr10 59526484 59526790 -86062498 - AluSx SINE Alu -6 306 1 1625 225 34 70 chr10 59527768 59528580 -86060708 + L1M2 LINE L1 2636 3421 -3427 2211 135 49 0 chr10 59528581 59528928 -86060360 - THE1B LTR MaLR 0 364 1 2414 83 3 0 chr10 59528928 59529266 -86060022 - THE1B-int LTR MaLR 0 1580 1242 * 2562 138 25 0 chr10 59529264 59529664 -86059624 - THE1B-int LTR MaLR -495 1085 676 * 3304 202 29 9 chr10 59529662 59530500 -86058788 + L1M2 LINE L1 4504 5357 -1491 3521 204 10 1 chr10 59530519 59531200 -86058088 + L1 LINE L1 645 1331 -6234 3007 144 14 2 chr10 59531197 59531775 -86057513 + L1 LINE L1 5716 6300 -1265 * 793 123 11 0 chr10 59531777 59531912 -86057376 + THE1C LTR MaLR 246 375 0 571 279 187 30 chr10 59531982 59532281 -86057007 + L1MC4 LINE L1 7238 7489 -553 303 28 0 0 chr10 59532281 59532317 -86056971 + (TA)n Simple_repeat Simple_repeat 2 37 0 571 279 187 30 chr10 59532317 59532590 -86056698 + L1MC4 LINE L1 7489 7900 -142 211 338 0 0 chr10 59533634 59533711 -86055577 + CT-rich Low_complexity Low_complexity 4 80 0 202 139 23 0 chr10 59533713 59533756 -86055532 + (TA)n Simple_repeat Simple_repeat 2 45 0 183 288 0 0 chr10 59533779 59533845 -86055443 + CT-rich Low_complexity Low_complexity 3 68 0 4715 112 48 88 chr10 59533874 59535311 -86053977 + pTR5 LTR ERV1 743 2295 -143 251 27 0 27 chr10 59536937 59536974 -86052314 + (TTTTTG)n Simple_repeat Simple_repeat 1 36 0 242 318 0 0 chr10 59537313 59537376 -86051912 - MIR SINE MIR -147 115 53 2478 44 0 3 chr10 59537381 59537677 -86051611 + AluY SINE Alu 1 295 -16 340 233 0 12 chr10 59538541 59538627 -86050661 - L3b LINE CR1 -385 1198 1114 258 318 37 28 chr10 59539682 59539789 -86049499 - MIR SINE MIR -132 130 23 28 0 0 0 chr10 59540066 59540094 -86049194 + AT_rich Low_complexity Low_complexity 1 28 0 492 117 0 0 chr10 59540362 59540439 -86048849 + (TA)n Simple_repeat Simple_repeat 1 77 0 24 32 0 0 chr10 59540914 59540945 -86048343 + AT_rich Low_complexity Low_complexity 1 31 0 1933 154 9 43 chr10 59542290 59542476 -86046812 - MER1B DNA MER1_type -2373 339 148 1742 157 69 36 chr10 59542476 59542839 -86046449 + THE1C LTR MaLR 1 375 0 8945 145 22 31 chr10 59542839 59544430 -86044858 + THE1C-int LTR MaLR 1 1576 -4 1568 159 76 92 chr10 59544435 59544869 -86044419 + MSTA LTR MaLR 2 428 0 1933 154 9 43 chr10 59544869 59545025 -86044263 - MER1B DNA MER1_type -2567 145 2 269 371 0 9 chr10 59545031 59545147 -86044141 - L2 LINE L2 -11 3302 3188 230 289 36 140 chr10 59545219 59545583 -86043705 - L2 LINE L2 -138 3175 2850 1041 265 49 30 chr10 59545974 59546785 -86042503 - L1ME LINE L1 -502 5664 4846 1825 173 55 3 chr10 59546785 59547131 -86042157 + THE1B LTR MaLR 1 364 0 1041 265 49 30 chr10 59547131 59547184 -86042104 - L1ME LINE L1 -1320 4846 4795 373 333 10 27 chr10 59547214 59547508 -86041780 - L1ME LINE L1 -1950 4196 3908 1072 226 36 13 chr10 59547508 59547945 -86041343 - MLT1D LTR MaLR 0 505 3 447 306 59 0 chr10 59547949 59548168 -86041120 - L1ME LINE L1 -2236 3910 3679 30 0 0 0 chr10 59548629 59548659 -86040629 + AT_rich Low_complexity Low_complexity 1 30 0 1302 168 81 32 chr10 59548862 59549172 -86040116 - THE1C LTR MaLR 0 375 51 437 253 316 0 chr10 59549406 59549564 -86039724 + MIR SINE MIR 40 247 -15 1086 156 0 22 chr10 59549694 59549874 -86039414 + AluSx SINE Alu 1 176 -136 269 288 35 18 chr10 59550233 59550403 -86038885 + CT-rich Low_complexity Low_complexity 2 174 0 22 35 0 0 chr10 59550572 59550601 -86038687 + GC_rich Low_complexity Low_complexity 1 29 0 251 286 79 0 chr10 59550895 59550958 -86038330 - L2 LINE L2 -2 3270 3203 1577 132 7 15 chr10 59551696 59552138 -86037150 + pTR5 LTR ERV1 1 446 -1992 * 4643 101 0 16 chr10 59552137 59552830 -86036458 - HERV9 LTR ERV1 -6953 1446 765 1107 89 13 0 chr10 59553799 59553956 -86035332 - AluY SINE Alu -13 298 140 425 245 143 46 chr10 59555412 59555649 -86033639 - MIR SINE MIR 0 262 3 1396 107 107 20 chr10 59555964 59556208 -86033080 + MER2 DNA MER2_type 1 265 -80 735 153 14 35 chr10 59556208 59556352 -86032936 - FLAM_A SINE Alu -1 141 1 526 121 11 44 chr10 59556356 59556447 -86032841 + MER2 DNA MER2_type 258 345 0 388 169 55 16 chr10 59556729 59556812 -86032476 - MER5A DNA MER1_type -1 188 93 258 306 222 6 chr10 59557082 59557262 -86032026 + MIR SINE MIR 10 228 -34 420 271 8 42 chr10 59557613 59557731 -86031557 - MIR3 SINE MIR -14 194 81 255 103 0 0 chr10 59558180 59558219 -86031069 + (TCTCCC)n Simple_repeat Simple_repeat 5 43 0 289 316 23 17 chr10 59558221 59558395 -86030893 + CT-rich Low_complexity Low_complexity 3 177 0 * 304 325 6 18 chr10 59558312 59558481 -86030807 + T-rich Low_complexity Low_complexity 3 169 0 924 167 47 84 chr10 59558582 59559136 -86030152 - L1MCb LINE L1 -4848 1716 1076 219 36 0 0 chr10 59559138 59559166 -86030122 + (TTTTA)n Simple_repeat Simple_repeat 3 30 0 848 108 0 8 chr10 59559166 59559286 -86030002 - FLAM_C SINE Alu -24 119 1 427 250 45 32 chr10 59559437 59559593 -86029695 + MIR3 SINE MIR 2 159 -49 3553 111 26 7 chr10 59559794 59560337 -86028951 - LTR9B LTR ERV1 -91 553 1 2849 112 13 9 chr10 59560337 59560784 -86028504 - HUERS-P3 LTR ERV1 0 8919 8471 26 30 0 0 chr10 59561422 59561455 -86027833 + AT_rich Low_complexity Low_complexity 1 33 0 1211 179 19 41 chr10 59562047 59562315 -86026973 + MLT1B LTR MaLR 129 390 0 1975 96 28 3 chr10 59562468 59562750 -86026538 - AluY SINE Alu -22 289 1 447 289 70 118 chr10 59562792 59563362 -86025926 + L2 LINE L2 1699 2241 -1073 474 206 26 58 chr10 59563366 59563521 -86025767 - L1MC5 LINE L1 -212 7749 7600 286 341 7 51 chr10 59563548 59563686 -86025602 + L2 LINE L2 2699 2830 -484 370 268 163 19 chr10 59563826 59564035 -86025253 - L2 LINE L2 -357 2957 2719 239 330 9 28 chr10 59564757 59564866 -86024422 + MIR SINE MIR 28 134 -74 884 260 117 15 chr10 59565690 59566102 -86023186 - L1 LINE L1 -2055 4091 3638 642 224 62 6 chr10 59566143 59566322 -86022966 + MER96B DNA MER1_type? 13 201 -216 396 248 127 43 chr10 59566498 59566797 -86022491 - HAL1b LINE L1 -237 1111 788 803 285 105 14 chr10 59566818 59567257 -86022031 + L1ME4a LINE L1 5484 5962 -159 10929 39 1 13 chr10 59567886 59569316 -86019972 - L1P LINE L1 -1995 4151 2739 2575 26 0 0 chr10 59569315 59569618 -86019670 + L1P LINE L1 4481 4783 -1363 * 717 212 7 13 chr10 59570163 59570314 -86018974 - MLT1I LTR MaLR -2 407 258 1425 112 70 0 chr10 59570336 59570551 -86018737 + MER30 DNA MER1_type 1 230 0 1418 200 64 19 chr10 59570594 59571009 -86018279 + LTR48 LTR ERV1 255 787 0 235 187 41 41 chr10 59571096 59571219 -86018069 - AluSg/x SINE Alu -3 299 177 231 294 0 12 chr10 59571231 59571316 -86017972 + CT-rich Low_complexity Low_complexity 2 85 0 236 314 0 0 chr10 59571449 59571519 -86017769 + MLT1L LTR MaLR 539 608 -7 3890 91 255 1 chr10 59571656 59572315 -86016973 + LTR12 LTR ERV1 1 826 0 2492 155 10 2 chr10 59572315 59572716 -86016572 + HERV9 LTR ERV1 1 404 -7995 2370 128 34 12 chr10 59572829 59573244 -86016044 + L1MA8 LINE L1 5858 6281 -10 2144 77 28 3 chr10 59573252 59573538 -86015750 - AluSq SINE Alu -20 293 1 756 106 0 32 chr10 59574015 59574138 -86015150 - FLAM_A SINE Alu -3 139 21 228 280 21 54 chr10 59575144 59575237 -86014051 - L1ME LINE L1 -302 5819 5730 21 0 0 0 chr10 59575294 59575315 -86013973 + AT_rich Low_complexity Low_complexity 1 21 0 189 286 14 121 chr10 59576383 59576523 -86012765 - L2 LINE L2 -7 3306 3182 189 171 0 0 chr10 59576879 59576914 -86012374 + (TTTA)n Simple_repeat Simple_repeat 4 38 0 210 93 56 56 chr10 59578921 59578975 -86010313 + A-rich Low_complexity Low_complexity 2 55 0 2022 119 3 3 chr10 59578997 59579290 -86009998 + AluSq SINE Alu 4 296 -17 1742 238 7 2 chr10 59579547 59579979 -86009309 - L1 LINE L1 -1591 4555 4122 2149 240 51 33 chr10 59579986 59580674 -86008614 + L1MD2 LINE L1 5638 6337 -22 707 308 88 71 chr10 59580684 59581895 -86007393 + HAL1 LINE L1 1276 2507 0 266 322 14 7 chr10 59581926 59582069 -86007219 + (TA)n Simple_repeat Simple_repeat 2 145 0 252 271 59 51 chr10 59583021 59583139 -86006149 + L1MEc LINE L1 271 389 -6007 347 375 28 36 chr10 59583238 59583489 -86005799 + L1MEc LINE L1 503 751 -5645 896 235 98 18 chr10 59585296 59585494 -86003794 + L1MC/D LINE L1 5329 5558 -801 1832 185 6 104 chr10 59585494 59585965 -86003323 + MER61B LTR ERV1 1 425 0 896 235 98 18 chr10 59585965 59586051 -86003237 + L1MC/D LINE L1 5558 5636 -723 4828 149 20 34 chr10 59586063 59587062 -86002226 - L1PA16 LINE L1 -13 6153 5152 2356 129 3 21 chr10 59587062 59587442 -86001846 + THE1C LTR MaLR 3 375 0 4828 149 20 34 chr10 59587442 59587836 -86001452 - L1PA16 LINE L1 -1014 5152 4754 199 253 177 0 chr10 59588612 59588691 -86000597 - L2 LINE L2 0 3272 3180 316 124 0 17 chr10 59588933 59588997 -86000291 + AluJ/FRAM SINE Alu 231 274 -28 386 268 88 58 chr10 59589061 59589266 -86000022 - L2 LINE L2 -1 3312 3102 224 98 0 24 chr10 59589902 59589943 -85999345 + (GA)n Simple_repeat Simple_repeat 2 41 0 258 311 184 35 chr10 59589978 59590206 -85999082 + MIR SINE MIR 1 262 0 4367 209 28 2 chr10 59590460 59591663 -85997625 + L1PB4 LINE L1 4925 6156 0 284 364 36 23 chr10 59591656 59591958 -85997330 + L1MCc LINE L1 79 384 -6039 * 1787 248 113 61 chr10 59592488 59594162 -85995126 + L1MCc LINE L1 2426 4152 -2789 247 256 101 31 chr10 59594290 59594419 -85994869 + L1MCc LINE L1 4305 4442 -2499 37 23 0 0 chr10 59594427 59594471 -85994817 + AT_rich Low_complexity Low_complexity 1 44 0 688 107 18 36 chr10 59595791 59595903 -85993385 + MER72 LTR ERV1 585 694 -28 624 307 75 19 chr10 59598352 59598619 -85990669 + MLT1C LTR MaLR 186 467 0 278 313 87 26 chr10 59599921 59600036 -85989252 + L2 LINE L2 3177 3298 -15 212 166 73 13 chr10 59600434 59600585 -85988703 + (TA)n Simple_repeat Simple_repeat 2 161 0 848 167 0 0 chr10 59600656 59600788 -85988500 - Tigger7 DNA MER2_type -1 2486 2355 655 172 159 0 chr10 59600804 59600961 -85988327 - Tigger7 DNA MER2_type -1819 668 487 1882 124 51 0 chr10 59601978 59602252 -85987036 + AluSq SINE Alu 1 288 -25 376 296 30 0 chr10 59602874 59603006 -85986282 - L1ME2 LINE L1 -2 6162 6027 226 202 138 9 chr10 59603015 59603124 -85986164 - L1M4 LINE L1 -851 5295 5173 1516 190 7 0 chr10 59603342 59603611 -85985677 - L1MC1 LINE L1 -15 6318 6048 261 0 0 0 chr10 59603611 59603640 -85985648 + (TA)n Simple_repeat Simple_repeat 1 29 0 242 341 0 0 chr10 59603640 59603731 -85985557 - L1MC4 LINE L1 -1339 6703 6613 * 273 273 0 0 chr10 59603666 59603743 -85985545 + L1MC4 LINE L1 6624 6700 -1342 864 201 6 0 chr10 59603743 59603917 -85985371 - L1MC1 LINE L1 -290 6043 5869 264 235 0 0 chr10 59603916 59603967 -85985321 - L1MCa LINE L1 -5801 625 575 * 259 195 0 0 chr10 59603973 59604014 -85985274 - L1MCa LINE L1 -5812 614 574 2223 228 57 31 chr10 59604022 59604602 -85984686 - L1MCa LINE L1 -5831 595 1 23 33 0 0 chr10 59604617 59604647 -85984641 + AT_rich Low_complexity Low_complexity 1 30 0 314 296 82 34 chr10 59604698 59604992 -85984296 - L1M4 LINE L1 -1157 4989 4682 750 279 42 37 chr10 59605060 59605550 -85983738 - L1M4 LINE L1 -1575 4571 4096 245 282 24 35 chr10 59605657 59605742 -85983546 - MIR SINE MIR -66 142 59 548 246 55 11 chr10 59606130 59606329 -85982959 - L1MDa LINE L1 -4932 1616 1404 25 0 0 0 chr10 59607415 59607440 -85981848 + AT_rich Low_complexity Low_complexity 1 25 0 380 283 16 48 chr10 59607625 59607812 -85981476 - MLT1H1 LTR MaLR -42 513 333 21 36 0 0 chr10 59608626 59608654 -85980634 + AT_rich Low_complexity Low_complexity 1 28 0 1276 256 95 48 chr10 59608836 59609415 -85979873 + L1MC4 LINE L1 3395 3945 -2221 204 40 0 0 chr10 59609415 59609440 -85979848 + (CA)n Simple_repeat Simple_repeat 2 26 0 1276 256 95 48 chr10 59609440 59610725 -85978563 + L1MC4 LINE L1 3945 6147 -19 853 30 0 0 chr10 59610817 59610917 -85978371 - L1PA5 LINE L1 -11 6143 6044 191 36 36 0 chr10 59611195 59611223 -85978065 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 969 263 110 38 chr10 59611227 59611911 -85977377 + L1MC4a LINE L1 6241 6967 -1075 2151 147 53 35 chr10 59611920 59612319 -85976969 - MSTA LTR MaLR -13 404 1 266 279 65 39 chr10 59612481 59612635 -85976653 - L2 LINE L2 -4 3309 3152 21 36 0 0 chr10 59613445 59613473 -85975815 + AT_rich Low_complexity Low_complexity 1 28 0 1207 177 5 0 chr10 59614933 59615142 -85974146 - MSTC LTR MaLR 0 428 219 194 376 160 6 chr10 59615551 59615894 -85973394 + L3 LINE CR1 635 1030 -547 358 314 21 14 chr10 59616227 59616367 -85972921 + MIR SINE MIR 11 151 -111 724 210 28 0 chr10 59616395 59616538 -85972750 + MER58B DNA MER1_type 194 340 -1 2583 176 40 8 chr10 59616599 59617070 -85972218 - MER66B LTR ERV1 0 486 1 247 216 0 0 chr10 59617505 59617556 -85971732 + MIR SINE MIR 201 251 -11 248 149 0 119 chr10 59617596 59617663 -85971625 - MLT1J LTR MaLR -2 509 451 * 256 253 48 24 chr10 59617651 59617734 -85971554 + LTR16C LTR ERVL 315 399 -92 1806 159 13 3 chr10 59618399 59618708 -85970580 - AluSx SINE Alu 0 312 1 486 133 0 76 chr10 59618727 59618832 -85970456 - L1MA3 LINE L1 -1 6304 6208 230 247 27 27 chr10 59619195 59619268 -85970020 + MLT1J2 LTR MaLR 333 405 -45 420 303 0 0 chr10 59619901 59620010 -85969278 + L1PA16 LINE L1 1 109 -6678 3883 279 43 37 chr10 59620011 59622001 -85967287 + L1PA16 LINE L1 215 2425 -4372 6640 49 4 0 chr10 59622140 59622962 -85966326 - L1PA5 LINE L1 0 6154 5330 * 10640 228 20 12 chr10 59622958 59623025 -85966263 + L1PA16 LINE L1 2982 3047 -3770 2397 91 33 28 chr10 59623025 59623387 -85965901 - THE1B LTR MaLR 0 364 1 10640 228 20 12 chr10 59623387 59626988 -85962300 + L1PA16 LINE L1 3047 6678 -139 321 319 9 9 chr10 59627292 59627405 -85961883 - MIR SINE MIR -63 145 33 547 167 53 8 chr10 59627937 59628069 -85961219 + AluSp/q SINE Alu 176 313 0 801 89 5 63 chr10 59628078 59628268 -85961020 + (GAAA)n Simple_repeat Simple_repeat 1 179 0 207 0 0 0 chr10 59628503 59628526 -85960762 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 488 321 115 38 chr10 59628962 59629380 -85959908 + L1ME LINE L1 1579 2028 -4368 * 5589 35 7 0 chr10 59629365 59630047 -85959241 - L1P LINE L1 -1498 4648 3962 447 251 36 86 chr10 59630047 59630402 -85958886 + L1ME LINE L1 2035 2317 -3900 422 233 33 39 chr10 59630451 59630631 -85958657 + L1ME LINE L1 2304 2482 -3733 277 329 29 5 chr10 59630734 59630944 -85958344 + L1M4 LINE L1 5180 5394 -752 918 254 50 15 chr10 59630960 59631298 -85957990 + L1ME LINE L1 5364 5713 -520 41158 38 22 1 chr10 59631665 59637619 -85951669 + L1PA2 LINE L1 96 6176 0 29 47 0 0 chr10 59637954 59637997 -85951291 + AT_rich Low_complexity Low_complexity 1 43 0 655 130 48 31 chr10 59638313 59638603 -85950685 + (TA)n Simple_repeat Simple_repeat 1 295 0 22 0 0 0 chr10 59641233 59641255 -85948033 + AT_rich Low_complexity Low_complexity 1 22 0 384 22 0 0 chr10 59643471 59643516 -85945772 + (TG)n Simple_repeat Simple_repeat 2 46 0 195 42 0 0 chr10 59644402 59644426 -85944862 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2094 107 7 0 chr10 59644441 59644731 -85944557 - AluSg SINE Alu -18 292 1 24 0 0 0 chr10 59644742 59644766 -85944522 + AT_rich Low_complexity Low_complexity 1 24 0 427 232 55 0 chr10 59644790 59644954 -85944334 + (TA)n Simple_repeat Simple_repeat 2 174 0 315 258 0 31 chr10 59644954 59645051 -85944237 - L1MC4 LINE L1 -1337 6705 6612 225 130 43 43 chr10 59645051 59645120 -85944168 + (TATG)n Simple_repeat Simple_repeat 2 70 0 26 45 0 45 chr10 59645260 59645326 -85943962 + AT_rich Low_complexity Low_complexity 1 63 0 484 153 45 6 chr10 59645334 59645491 -85943797 + (TA)n Simple_repeat Simple_repeat 1 163 0 251 28 28 0 chr10 59645491 59645527 -85943761 + (CA)n Simple_repeat Simple_repeat 2 38 0 413 348 73 21 chr10 59645600 59645833 -85943455 + MIR SINE MIR 18 262 0 21 0 0 0 chr10 59645966 59645987 -85943301 + AT_rich Low_complexity Low_complexity 1 21 0 251 77 5 0 chr10 59645990 59646036 -85943252 - L1PA6 LINE L1 0 6154 6107 329 288 50 0 chr10 59646153 59646292 -85942996 + MER117 DNA MER1_type 44 189 -8 1334 203 0 11 chr10 59646359 59646630 -85942658 - L1P LINE L1 -2213 3933 3666 193 388 79 7 chr10 59646659 59646811 -85942477 + L3 LINE CR1 744 906 -671 190 255 0 0 chr10 59647174 59647221 -85942067 + L3 LINE CR1 1338 1384 -193 365 332 50 30 chr10 59647288 59647487 -85941801 + MIR SINE MIR 49 251 -11 2338 96 0 6 chr10 59647809 59648123 -85941165 - AluSp SINE Alu -1 312 1 1704 178 3 3 chr10 59648148 59648441 -85940847 - AluSx SINE Alu -17 295 3 511 99 0 12 chr10 59648820 59648901 -85940387 - L1MA3 LINE L1 -6 6299 6220 23 33 0 0 chr10 59649638 59649668 -85939620 + AT_rich Low_complexity Low_complexity 1 30 0 299 154 31 15 chr10 59649856 59649921 -85939367 + L1PA15 LINE L1 5956 6021 -144 1532 160 160 73 chr10 59649924 59650292 -85938996 - MER4A LTR ERV1 0 664 265 506 192 0 10 chr10 59650296 59650395 -85938893 - MER4A LTR ERV1 -566 98 1 563 208 0 39 chr10 59650396 59650526 -85938762 + L1PA15 LINE L1 6039 6163 -2 405 299 7 48 chr10 59650542 59650689 -85938599 + L2 LINE L2 3173 3313 0 2107 134 71 6 chr10 59650714 59651065 -85938223 - THE1C LTR MaLR -1 374 1 553 228 20 7 chr10 59651258 59651407 -85937881 - L1MA10 LINE L1 -4 6330 6180 385 316 8 15 chr10 59651692 59651825 -85937463 - MLT1H LTR MaLR -387 162 31 356 164 0 0 chr10 59651901 59651962 -85937326 + Charlie5 DNA MER1_type 2525 2585 -27 5907 87 55 3 chr10 59652216 59653078 -85936210 - L1PA10 LINE L1 -9 6159 5254 18207 194 27 29 chr10 59653079 59657859 -85931429 - L1P3 LINE L1 -1689 4772 10 2511 204 4 0 chr10 59658824 59659310 -85929978 - L1PA16 LINE L1 -24 6142 5655 * 6858 237 11 11 chr10 59659304 59661095 -85928193 - L1 LINE L1 -756 5390 3599 1511 227 22 6 chr10 59661095 59661412 -85927876 - MSTB LTR MaLR -104 322 1 468 296 19 0 chr10 59662631 59662739 -85926549 + MER81 DNA DNA 4 113 -1 892 229 14 19 chr10 59663525 59663735 -85925553 - MER20 DNA MER1_type -5 214 6 1074 194 46 9 chr10 59663801 59664017 -85925271 + AluJb SINE Alu 1 224 -88 1158 213 102 45 chr10 59665055 59665459 -85923829 - MER31B LTR ERV1 -31 435 9 25 31 0 0 chr10 59666113 59666145 -85923143 + AT_rich Low_complexity Low_complexity 1 32 0 363 23 0 0 chr10 59666185 59666229 -85923059 + (CA)n Simple_repeat Simple_repeat 2 45 0 2255 109 0 0 chr10 59666470 59666763 -85922525 + AluSp SINE Alu 1 293 -20 420 366 153 2 chr10 59666763 59667156 -85922132 - L1MC4a LINE L1 -1903 5905 5453 1900 142 40 37 chr10 59667172 59667546 -85921742 - THE1C LTR MaLR 0 375 1 22 0 0 0 chr10 59667629 59667651 -85921637 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr10 59667786 59667816 -85921472 + AT_rich Low_complexity Low_complexity 1 30 0 276 330 28 9 chr10 59667952 59668058 -85921230 + MIR3 SINE MIR 75 182 -26 22 0 0 0 chr10 59668487 59668509 -85920779 + AT_rich Low_complexity Low_complexity 1 22 0 25 31 0 0 chr10 59669117 59669149 -85920139 + AT_rich Low_complexity Low_complexity 1 32 0 1502 219 77 15 chr10 59669215 59669564 -85919724 + MSTD LTR MaLR 1 396 0 180 200 0 0 chr10 59669565 59669610 -85919678 + (CA)n Simple_repeat Simple_repeat 2 46 0 1494 275 98 18 chr10 59669855 59670757 -85918531 + L1MC3 LINE L1 1128 2141 -4506 440 265 75 42 chr10 59670845 59671077 -85918211 + L1MC3 LINE L1 2260 2512 -4028 575 275 106 13 chr10 59671489 59671725 -85917563 + MIR SINE MIR 1 258 -4 254 331 44 44 chr10 59671906 59672042 -85917246 + MIR SINE MIR 15 150 -112 291 122 0 0 chr10 59672068 59672117 -85917171 + (TG)n Simple_repeat Simple_repeat 1 49 0 32 0 0 0 chr10 59672169 59672201 -85917087 + AT_rich Low_complexity Low_complexity 1 32 0 207 204 0 0 chr10 59672752 59672796 -85916492 + (CA)n Simple_repeat Simple_repeat 1 44 0 2568 222 120 17 chr10 59675049 59675696 -85913592 + L1MC3 LINE L1 5025 5604 -936 2501 52 0 10 chr10 59675696 59676006 -85913282 + AluY SINE Alu 1 307 -4 2568 222 120 17 chr10 59676006 59676251 -85913037 + L1MC3 LINE L1 5604 5482 -1058 2652 83 13 5 chr10 59676251 59676624 -85912664 - L1PA8 LINE L1 -6 6166 5791 2568 222 120 17 chr10 59676624 59676962 -85912326 + L1MC3 LINE L1 5481 5783 -757 246 175 0 0 chr10 59676959 59677016 -85912272 + L1MC3 LINE L1 7728 7784 -1 * 1709 56 0 0 chr10 59678136 59678349 -85910939 + L1PA5 LINE L1 5935 6147 -7 24 0 0 0 chr10 59679254 59679278 -85910010 + AT_rich Low_complexity Low_complexity 1 24 0 434 269 103 36 chr10 59680029 59680282 -85909006 - L1ME4a LINE L1 -195 5926 5657 569 227 23 0 chr10 59680329 59680457 -85908831 + MLT1B LTR MaLR 260 390 0 38 0 0 0 chr10 59680764 59680802 -85908486 + AT_rich Low_complexity Low_complexity 1 38 0 29 60 0 0 chr10 59681219 59681269 -85908019 + AT_rich Low_complexity Low_complexity 1 50 0 22 35 0 0 chr10 59681492 59681521 -85907767 + AT_rich Low_complexity Low_complexity 1 29 0 280 233 53 30 chr10 59681975 59682108 -85907180 + MER103 DNA DNA 12 147 -19 590 89 0 0 chr10 59682134 59682213 -85907075 - MADE1 DNA Mariner -1 79 1 182 377 0 0 chr10 59683092 59683161 -85906127 - MIR SINE MIR -13 249 181 1565 225 23 63 chr10 59683451 59683926 -85905362 + MLT1C LTR MaLR 10 465 -2 5530 93 20 15 chr10 59684095 59684646 -85904642 - L1PA13 LINE L1 0 6163 5605 2171 114 0 10 chr10 59684646 59684954 -85904334 - AluSq SINE Alu -8 305 1 5530 93 20 15 chr10 59684954 59685209 -85904079 - L1PA13 LINE L1 -558 5605 5353 770 233 110 0 chr10 59686973 59687209 -85902079 - L1ME1 LINE L1 -110 6056 5795 25 51 0 0 chr10 59687230 59687269 -85902019 + AT_rich Low_complexity Low_complexity 1 39 0 198 128 0 0 chr10 59688763 59688802 -85900486 + (TA)n Simple_repeat Simple_repeat 2 40 0 21 0 0 0 chr10 59689335 59689356 -85899932 + AT_rich Low_complexity Low_complexity 1 21 0 6266 194 27 16 chr10 59690229 59690793 -85898495 - L1M1 LINE L1 -743 5403 4847 1496 134 106 4 chr10 59690793 59691039 -85898249 - AluSx SINE Alu -15 297 27 6266 194 27 16 chr10 59691039 59692061 -85897227 - L1M1 LINE L1 -1299 4847 3873 733 175 145 50 chr10 59692197 59692561 -85896727 - MER63 DNA MER1_type -231 830 265 321 143 18 98 chr10 59692723 59692794 -85896494 - MER63 DNA MER1_type -757 173 113 1208 163 179 19 chr10 59692794 59693051 -85896237 - AluSc SINE Alu -1 298 1 321 143 18 98 chr10 59693051 59693091 -85896197 - MER63 DNA MER1_type -817 113 71 1001 169 17 6 chr10 59693611 59693788 -85895500 - AluJb SINE Alu -14 298 120 408 52 0 0 chr10 59693790 59693848 -85895440 - AluSc SINE Alu -5 304 247 1032 162 0 12 chr10 59694147 59694314 -85894974 + FRAM SINE Alu 1 165 -1 662 128 9 0 chr10 59695201 59695310 -85893978 + L1PA7 LINE L1 6044 6153 -1 660 291 103 5 chr10 59695718 59695921 -85893367 + MIR SINE MIR 37 259 -3 182 143 20 0 chr10 59695950 59695999 -85893289 + (TA)n Simple_repeat Simple_repeat 1 50 0 21 57 0 0 chr10 59696162 59696197 -85893091 + AT_rich Low_complexity Low_complexity 1 35 0 1153 84 18 0 chr10 59696390 59696556 -85892732 - L1P LINE L1 -850 5296 5128 28 0 0 0 chr10 59697395 59697423 -85891865 + AT_rich Low_complexity Low_complexity 1 28 0 210 248 85 92 chr10 59697933 59698086 -85891202 - L2 LINE L2 -181 3091 2940 752 233 5 53 chr10 59698330 59698519 -85890769 - MLT1C LTR MaLR 0 467 288 331 176 40 14 chr10 59698528 59698602 -85890686 - MLT1C LTR MaLR -384 83 8 1197 237 88 31 chr10 59698606 59699103 -85890185 + MLT1E LTR MaLR 24 591 -2 524 209 98 49 chr10 59699321 59699484 -85889804 - L1ME3A LINE L1 -72 6098 5928 304 318 40 40 chr10 59699495 59699693 -85889595 - AluSg/x SINE Alu -5 297 157 332 311 50 0 chr10 59699836 59699955 -85889333 + MIR SINE MIR 123 247 -15 1639 202 21 0 chr10 59700028 59700315 -85888973 - AluJb SINE Alu -19 293 1 237 159 0 0 chr10 59700810 59700854 -85888434 + T-rich Low_complexity Low_complexity 1 44 0 2786 161 34 17 chr10 59700855 59701389 -85887899 - L1MB4 LINE L1 -37 6143 5601 221 364 109 0 chr10 59701968 59702078 -85887210 - L2 LINE L2 -15 3257 3136 765 201 39 64 chr10 59702722 59703080 -85886208 + L1M3 LINE L1 5331 5679 -655 757 199 29 0 chr10 59703215 59703351 -85885937 + MER20 DNA MER1_type 70 209 -10 308 243 30 118 chr10 59703604 59703773 -85885515 - MIR SINE MIR -30 232 79 303 296 113 25 chr10 59704770 59704929 -85884359 - MIR SINE MIR -62 200 28 549 195 156 0 chr10 59705292 59705446 -85883842 + MER45A DNA AcHobo 1 178 0 248 286 14 14 chr10 59705447 59705517 -85883771 + MIR SINE MIR 77 146 -62 195 278 97 14 chr10 59706046 59706118 -85883170 - L2 LINE L2 -10 3262 3185 257 188 109 47 chr10 59708564 59708628 -85880660 + MIR SINE MIR 117 184 -78 195 219 211 65 chr10 59709042 59709165 -85880123 + MIR3 SINE MIR 9 149 -59 362 208 128 101 chr10 59709402 59709551 -85879737 + MER5A DNA MER1_type 23 186 -3 382 282 175 15 chr10 59710365 59710571 -85878717 - MIR SINE MIR 0 262 24 714 146 16 109 chr10 59710633 59710825 -85878463 + AluSx SINE Alu 1 174 -138 31 0 0 0 chr10 59710977 59711008 -85878280 + AT_rich Low_complexity Low_complexity 1 31 0 767 171 47 0 chr10 59711461 59711590 -85877698 + FRAM SINE Alu 22 156 -20 1994 129 13 10 chr10 59711756 59712066 -85877222 + AluSp SINE Alu 1 311 -2 185 250 50 100 chr10 59712467 59712547 -85876741 + MIR SINE MIR 47 122 -86 1498 158 15 15 chr10 59715234 59715499 -85873789 - AluJo SINE Alu -6 306 42 261 195 24 61 chr10 59715905 59715987 -85873301 + MIR SINE MIR 17 95 -167 400 162 0 0 chr10 59716451 59716519 -85872769 - THE1A-int LTR MaLR -1512 68 1 2564 86 17 3 chr10 59716519 59716869 -85872419 - THE1A LTR MaLR 0 355 1 306 286 98 18 chr10 59718038 59718150 -85871138 - MIR3 SINE MIR -6 202 82 1035 115 0 0 chr10 59719653 59719810 -85869478 + (TG)n Simple_repeat Simple_repeat 2 158 0 798 143 8 8 chr10 59721373 59721506 -85867782 + FLAM_C SINE Alu 1 133 0 603 132 91 0 chr10 59721581 59721702 -85867586 + L1MA9 LINE L1 6179 6310 -2 5561 215 66 4 chr10 59722283 59724892 -85864396 - L1 LINE L1 -2305 4543 1766 24 0 0 0 chr10 59725466 59725490 -85863798 + AT_rich Low_complexity Low_complexity 1 24 0 1971 141 10 7 chr10 59725630 59725936 -85863352 + AluSx SINE Alu 1 307 -5 23 0 0 0 chr10 59726727 59726750 -85862538 + AT_rich Low_complexity Low_complexity 1 23 0 417 220 0 0 chr10 59726840 59726931 -85862357 + L1MB2 LINE L1 6007 6097 -74 1083 149 23 0 chr10 59727223 59727398 -85861890 - MLT1C LTR MaLR -5 462 284 595 242 68 32 chr10 59727603 59727793 -85861495 - HERVL40 LTR ERVL -1969 3561 3365 21 57 0 0 chr10 59728357 59728392 -85860896 + AT_rich Low_complexity Low_complexity 1 35 0 185 344 67 11 chr10 59728481 59728571 -85860717 + MIR SINE MIR 58 152 -110 425 332 115 17 chr10 59729127 59729362 -85859926 - MIR SINE MIR -4 258 1 22 0 0 0 chr10 59729636 59729658 -85859630 + AT_rich Low_complexity Low_complexity 1 22 0 274 329 144 35 chr10 59730197 59730544 -85858744 + L3 LINE CR1 885 1269 -308 25 31 0 0 chr10 59730702 59730734 -85858554 + AT_rich Low_complexity Low_complexity 1 32 0 259 257 0 40 chr10 59730741 59730815 -85858473 - MIR SINE MIR -67 141 71 1874 124 29 63 chr10 59731097 59731445 -85857843 + MER1B DNA MER1_type 2 337 0 23 33 0 0 chr10 59732764 59732794 -85856494 + AT_rich Low_complexity Low_complexity 1 30 0 392 246 136 16 chr10 59733047 59733237 -85856051 + MLT1E3 LTR MaLR 1 266 -388 254 219 12 24 chr10 59736643 59736725 -85852563 + (TATG)n Simple_repeat Simple_repeat 4 84 0 23 0 0 0 chr10 59737637 59737660 -85851628 + AT_rich Low_complexity Low_complexity 1 23 0 310 372 21 14 chr10 59737683 59737828 -85851460 + MIR SINE MIR 15 160 -102 1599 178 70 0 chr10 59738427 59738714 -85850574 + AluSx SINE Alu 5 311 -1 27 0 0 0 chr10 59738714 59738741 -85850547 + AT_rich Low_complexity Low_complexity 1 27 0 2030 130 0 7 chr10 59739513 59739805 -85849483 - AluSx SINE Alu -18 294 5 5703 228 15 23 chr10 59740060 59741566 -85847722 - L1P LINE L1 -2983 3163 1670 3107 197 14 64 chr10 59741566 59742405 -85846883 + L1PA15 LINE L1 4105 4901 -1245 692 127 9 0 chr10 59742435 59742545 -85846743 - L1PA11 LINE L1 -3 6171 6061 5605 123 25 0 chr10 59742550 59743791 -85845497 + L1PA15 LINE L1 4900 6165 0 47 19 0 0 chr10 59743791 59743845 -85845443 + AT_rich Low_complexity Low_complexity 1 54 0 275 314 77 6 chr10 59744493 59744649 -85844639 + MIR SINE MIR 96 262 0 29 47 0 0 chr10 59746107 59746150 -85843138 + AT_rich Low_complexity Low_complexity 1 43 0 1341 240 54 63 chr10 59746203 59746628 -85842660 + MLT1C LTR MaLR 42 462 -5 626 267 14 0 chr10 59746737 59746883 -85842405 - MIR SINE MIR -25 237 90 1551 300 22 14 chr10 59747528 59748032 -85841256 - LTR40a LTR ERVL -8 511 4 837 259 26 90 chr10 59748183 59748573 -85840715 - MLT1A1 LTR MaLR 0 365 1 728 324 25 7 chr10 59748670 59748951 -85840337 + L1MEc LINE L1 38 323 -6073 401 252 0 30 chr10 59748959 59749090 -85840198 + L1MA10 LINE L1 6174 6300 -34 962 180 65 109 chr10 59749164 59749610 -85839678 + MER52A LTR ERV1 666 1232 -523 497 282 18 79 chr10 59749648 59749875 -85839413 + MER52A LTR ERV1 1240 1452 -303 487 281 33 0 chr10 59749898 59750051 -85839237 + MER52A LTR ERV1 1598 1755 0 23 33 0 0 chr10 59750087 59750117 -85839171 + AT_rich Low_complexity Low_complexity 1 30 0 209 83 28 0 chr10 59750181 59750217 -85839071 + (CA)n Simple_repeat Simple_repeat 2 38 0 1250 195 85 45 chr10 59750217 59750571 -85838717 + MLT1A2 LTR MaLR 5 372 -2 22 0 0 0 chr10 59750596 59750618 -85838670 + AT_rich Low_complexity Low_complexity 1 22 0 384 301 123 31 chr10 59751507 59751670 -85837618 - MER5A DNA MER1_type -1 188 11 302 314 92 32 chr10 59751682 59751867 -85837421 + MIR SINE MIR 13 208 -54 1022 88 41 0 chr10 59752956 59753103 -85836185 - L1P3 LINE L1 -425 5747 5595 368 162 0 27 chr10 59753223 59753297 -85835991 - L1MC1 LINE L1 0 6333 6262 530 293 136 0 chr10 59753343 59753541 -85835747 + L2 LINE L2 579 803 -2511 893 132 25 0 chr10 59753573 59753732 -85835556 - L1MA8 LINE L1 -6 6285 6123 427 273 84 74 chr10 59753732 59754043 -85835245 - MLT1I LTR MaLR -15 394 81 642 306 89 7 chr10 59754060 59754331 -85834957 + L2 LINE L2 1103 1395 -1919 215 330 45 0 chr10 59754394 59754482 -85834806 + L2 LINE L2 1376 1467 -1847 570 291 99 35 chr10 59754487 59754769 -85834519 + L2 LINE L2 2066 2365 -949 1431 296 88 45 chr10 59754936 59755757 -85833531 + L2 LINE L2 2335 3201 -112 382 299 75 15 chr10 59757188 59757322 -85831966 + MIR SINE MIR 4 145 -117 207 0 0 0 chr10 59757902 59757925 -85831363 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 1466 202 14 7 chr10 59758337 59758634 -85830654 + AluSx SINE Alu 1 299 -13 201 331 140 37 chr10 59758849 59758985 -85830303 + MIR3 SINE MIR 56 205 -3 2315 221 31 2 chr10 59759508 59759957 -85829331 + MER70A LTR ERVL 1 462 -10 805 330 159 7 chr10 59760027 59760614 -85828674 + L2 LINE L2 2505 3195 -118 183 80 0 0 chr10 59760970 59760995 -85828293 + (ATG)n Simple_repeat Simple_repeat 1 25 0 466 319 99 21 chr10 59761755 59762118 -85827170 + LTR16C LTR ERVL 72 491 0 306 149 0 15 chr10 59762296 59762361 -85826927 - MLT1A1 LTR MaLR 0 383 305 54 56 0 0 chr10 59762362 59762451 -85826837 + AT_rich Low_complexity Low_complexity 1 89 0 435 138 25 50 chr10 59762477 59762557 -85826731 - MLT1A1 LTR MaLR -46 319 252 4239 198 14 29 chr10 59762592 59763456 -85825832 - MLT1A1-int LTR MaLR -884 851 1 1482 239 22 22 chr10 59763456 59763820 -85825468 - MLT1A1 LTR MaLR 0 365 2 398 133 22 78 chr10 59764260 59764350 -85824938 + L1MD2 LINE L1 6258 6342 -17 252 0 0 0 chr10 59764592 59764620 -85824668 + (TA)n Simple_repeat Simple_repeat 2 29 0 216 206 235 0 chr10 59765162 59765230 -85824058 - MIR3 SINE MIR -3 205 122 27 0 0 0 chr10 59765511 59765538 -85823750 + AT_rich Low_complexity Low_complexity 1 27 0 482 320 20 0 chr10 59765779 59765929 -85823359 - MER5A DNA MER1_type -3 186 34 2129 137 22 22 chr10 59766035 59766399 -85822889 - THE1B LTR MaLR 0 364 1 2945 246 43 46 chr10 59766655 59768354 -85820934 - L1M1 LINE L1 -4421 2685 50 * 8460 246 31 31 chr10 59768349 59770274 -85819014 - L1 LINE L1 -985 5397 3473 1404 205 42 10 chr10 59770274 59770562 -85818726 + AluJb SINE Alu 1 297 -15 8460 246 31 31 chr10 59770562 59770586 -85818702 - L1 LINE L1 -2909 3473 3450 3085 130 8 8 chr10 59770586 59771077 -85818211 - L1PB3 LINE L1 -3 6151 5661 8460 246 31 31 chr10 59771077 59772407 -85816881 - L1 LINE L1 -2932 3450 2105 1971 122 3 17 chr10 59772407 59772721 -85816567 + AluSp SINE Alu 1 310 0 8460 246 31 31 chr10 59772721 59772875 -85816413 - L1 LINE L1 -4277 2105 1952 353 264 33 0 chr10 59773910 59774001 -85815287 - MIR3 SINE MIR -2 206 113 258 81 0 0 chr10 59774400 59774437 -85814851 + (TG)n Simple_repeat Simple_repeat 2 38 0 4792 221 26 31 chr10 59775102 59776461 -85812827 + L1MB3 LINE L1 3410 4762 -1384 1370 183 6 60 chr10 59776474 59776791 -85812497 + AluJo SINE Alu 13 312 0 1638 231 47 26 chr10 59776802 59777404 -85811884 + L1MB3 LINE L1 4748 5358 -798 3281 182 99 1 chr10 59777407 59778095 -85811193 + L1MB3 LINE L1 5397 6151 -32 21 57 0 0 chr10 59778889 59778924 -85810364 + AT_rich Low_complexity Low_complexity 1 35 0 534 265 135 23 chr10 59780146 59780391 -85808897 - MLT1J1 LTR MaLR -127 323 54 335 351 70 18 chr10 59780858 59781029 -85808259 + MER5A DNA MER1_type 7 186 -3 25 75 0 0 chr10 59783207 59783260 -85806028 + AT_rich Low_complexity Low_complexity 1 53 0 2221 71 41 0 chr10 59783313 59783607 -85805681 - AluY SINE Alu -1 310 5 192 275 0 0 chr10 59783645 59783685 -85805603 + L2 LINE L2 3224 3263 -9 5021 112 25 10 chr10 59783991 59784760 -85804528 + LTR17 LTR ERV1 1 780 0 198 333 44 35 chr10 59786828 59786942 -85802346 - L2 LINE L2 -3 3310 3196 344 223 161 99 chr10 59787344 59787555 -85801733 + L1 LINE L1 3125 3348 -2798 23 0 0 0 chr10 59787841 59787864 -85801424 + AT_rich Low_complexity Low_complexity 1 23 0 386 306 62 10 chr10 59788031 59788224 -85801064 + L1MEd LINE L1 1054 1256 -4863 249 225 75 94 chr10 59788340 59788500 -85800788 + L1MEd LINE L1 1373 1529 -4600 28 0 0 0 chr10 59788653 59788681 -85800607 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr10 59789008 59789030 -85800258 + AT_rich Low_complexity Low_complexity 1 22 0 414 265 150 47 chr10 59789055 59789696 -85799592 + L1MEd LINE L1 2230 2936 -3193 716 261 85 0 chr10 59791439 59791627 -85797661 - MIR SINE MIR -10 252 49 2035 229 123 59 chr10 59793935 59794261 -85795027 + L1MB8 LINE L1 129 433 -5814 2110 101 0 13 chr10 59794261 59794559 -85794729 + AluSg SINE Alu 1 294 -16 252 59 0 0 chr10 59794559 59794593 -85794695 + (TA)n Simple_repeat Simple_repeat 2 35 0 2035 229 123 59 chr10 59794593 59795677 -85793611 + L1MB8 LINE L1 432 6194 -53 986 278 86 40 chr10 59795730 59796327 -85792961 + L1MEc LINE L1 1013 1652 -4744 2212 95 10 7 chr10 59796327 59796633 -85792655 + AluY SINE Alu 1 307 -4 986 278 86 40 chr10 59796633 59796769 -85792519 + L1MEc LINE L1 1652 1780 -4616 689 226 38 0 chr10 59796770 59796903 -85792385 + FRAM SINE Alu 23 160 -16 360 226 129 13 chr10 59796904 59797059 -85792229 + L1MEc LINE L1 1888 2060 -4336 1033 251 100 127 chr10 59797103 59797661 -85791627 + MLT1E LTR MaLR 51 593 0 722 234 159 6 chr10 59797668 59797988 -85791300 + L1MEc LINE L1 2081 2449 -3947 251 228 25 0 chr10 59798014 59798093 -85791195 - L1MC4 LINE L1 -1347 6695 6615 697 214 66 11 chr10 59798123 59798409 -85790879 + L1MEc LINE L1 2442 2825 -3390 180 346 44 79 chr10 59799064 59799471 -85789817 - L2 LINE L2 -772 2542 2150 22 35 0 0 chr10 59800619 59800648 -85788640 + AT_rich Low_complexity Low_complexity 1 29 0 334 138 46 0 chr10 59800977 59801042 -85788246 + L1MA9 LINE L1 6207 6274 -38 21 0 0 0 chr10 59801286 59801307 -85787981 + AT_rich Low_complexity Low_complexity 1 21 0 2245 90 0 3 chr10 59801315 59801616 -85787672 + AluY SINE Alu 1 300 -11 1203 288 73 2 chr10 59801848 59802324 -85786964 - L1MB7 LINE L1 -1 6183 5674 1321 189 0 0 chr10 59802324 59802552 -85786736 + AluJo SINE Alu 1 228 -84 599 244 16 57 chr10 59802585 59802778 -85786510 + LTR4 LTR ERV1 16 200 -396 772 212 49 76 chr10 59802977 59803265 -85786023 + LTR4 LTR ERV1 317 596 0 373 117 0 0 chr10 59803268 59803328 -85785960 + Alu SINE Alu 242 301 -1 1615 272 47 36 chr10 59803328 59804135 -85785153 - L1MB7 LINE L1 -508 5676 4855 672 114 129 0 chr10 59804135 59804267 -85785021 + L1MA5 LINE L1 6152 6300 0 1615 272 47 36 chr10 59804267 59804546 -85784742 - L1MB7 LINE L1 -1329 4855 4581 270 288 85 46 chr10 59805153 59805306 -85783982 - MIR SINE MIR -38 224 66 180 0 0 0 chr10 59805534 59805554 -85783734 + (T)n Simple_repeat Simple_repeat 1 20 0 187 284 176 0 chr10 59805630 59805704 -85783584 + MIR SINE MIR 20 106 -156 2226 121 0 0 chr10 59805748 59806045 -85783243 - AluSq SINE Alu -16 297 1 2027 266 38 24 chr10 59807882 59808768 -85780520 - L1M4 LINE L1 -787 5753 4855 256 252 91 43 chr10 59808777 59808904 -85780384 - L1MDa LINE L1 -2678 3862 3720 2072 116 10 0 chr10 59808904 59809206 -85780082 - AluSp SINE Alu -8 305 1 256 252 91 43 chr10 59809206 59809288 -85780000 - L1MDa LINE L1 -2820 3720 3643 348 194 49 56 chr10 59809304 59809448 -85779840 - L1MDa LINE L1 -2878 3662 3520 902 255 56 26 chr10 59809462 59809975 -85779313 - L1MDa LINE L1 -3488 3052 2523 1078 260 52 24 chr10 59810620 59810989 -85778299 - L1MDa LINE L1 -5318 1225 847 782 292 57 20 chr10 59811308 59811609 -85777679 - L1MDa LINE L1 -6196 344 33 198 260 0 0 chr10 59811748 59811821 -85777467 + GA-rich Low_complexity Low_complexity 2 74 0 284 283 11 65 chr10 59812862 59812954 -85776334 - L2 LINE L2 -6 3307 3221 10144 224 45 17 chr10 59813430 59818029 -85771259 - L1MB1 LINE L1 -5 5987 1274 1224 293 11 4 chr10 59818036 59818487 -85770801 - L1 LINE L1 -3112 3034 2581 7057 48 0 0 chr10 59818530 59819533 -85769755 - L1PA5 LINE L1 -1 6153 5139 5148 41 2 3 chr10 59819533 59820171 -85769117 + L1PA5 LINE L1 4505 5141 -1005 604 268 13 26 chr10 59820169 59820471 -85768817 - L1 LINE L1 -3569 2577 2280 * 1279 264 108 17 chr10 59820477 59820541 -85768747 - L1MB1 LINE L1 -4620 1271 1214 261 98 0 0 chr10 59820541 59820582 -85768706 + (TATG)n Simple_repeat Simple_repeat 2 42 0 1279 264 108 17 chr10 59820582 59821047 -85768241 - L1MB1 LINE L1 -4677 1214 694 320 361 39 26 chr10 59821194 59821349 -85767939 - L1MB1 LINE L1 -5213 678 522 293 337 125 55 chr10 59821444 59821845 -85767443 - L1MB1 LINE L1 -5461 430 2 796 226 34 34 chr10 59822098 59822302 -85766986 + MER3 DNA MER1_type 5 208 -1 189 140 53 0 chr10 59822461 59822518 -85766770 + T-rich Low_complexity Low_complexity 1 60 0 289 278 164 48 chr10 59822609 59822873 -85766415 - HAL1 LINE L1 -9 2498 2181 294 50 0 0 chr10 59822873 59822913 -85766375 + (CA)n Simple_repeat Simple_repeat 1 40 0 289 278 164 48 chr10 59822913 59823001 -85766287 - HAL1 LINE L1 -326 2181 2105 1630 177 146 13 chr10 59823311 59823689 -85765599 + MSTA LTR MaLR 1 428 0 6135 66 22 1 chr10 59823854 59824668 -85764620 + L1PA7 LINE L1 5324 6154 0 21 0 0 0 chr10 59824933 59824954 -85764334 + AT_rich Low_complexity Low_complexity 1 21 0 1754 174 71 11 chr10 59824962 59825330 -85763958 + MLT1B LTR MaLR 1 390 0 31 68 0 0 chr10 59825768 59825827 -85763461 + AT_rich Low_complexity Low_complexity 1 59 0 1429 231 53 9 chr10 59826081 59826423 -85762865 - MLT1A1 LTR MaLR -3 362 6 189 278 125 0 chr10 59826534 59826606 -85762682 - MIR SINE MIR -110 152 72 22 0 0 0 chr10 59827183 59827205 -85762083 + AT_rich Low_complexity Low_complexity 1 22 0 298 302 111 29 chr10 59827427 59827512 -85761776 + HAL1 LINE L1 1560 1637 -870 7592 22 8 0 chr10 59827512 59828746 -85760542 - L1PA3 LINE L1 0 6155 4918 298 302 111 29 chr10 59828746 59828832 -85760456 + HAL1 LINE L1 1637 1745 -762 1013 191 45 104 chr10 59829192 59829527 -85759761 - MLT2D LTR ERVL 0 414 100 3698 160 61 1 chr10 59829527 59830202 -85759086 + L1PA16 LINE L1 5443 6157 -9 222 62 0 0 chr10 59830208 59830240 -85759048 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 1261 151 0 0 chr10 59830389 59830575 -85758713 - AluJb SINE Alu -63 249 64 1263 200 57 113 chr10 59831865 59832270 -85757018 + MLT2B1 LTR ERVL 4 528 -26 511 249 0 11 chr10 59832270 59832447 -85756841 + (TATATG)n Simple_repeat Simple_repeat 1 175 0 492 245 29 82 chr10 59832473 59832681 -85756607 + L2 LINE L2 3117 3313 0 212 324 74 28 chr10 59833069 59833177 -85756111 - MIR SINE MIR -132 130 18 2099 108 3 16 chr10 59833306 59833612 -85755676 + AluSx SINE Alu 1 302 -10 611 161 31 8 chr10 59833638 59833768 -85755520 - L1PA16 LINE L1 -3 6163 6031 261 176 44 0 chr10 59834327 59834395 -85754893 + (TA)n Simple_repeat Simple_repeat 1 71 0 2336 200 21 21 chr10 59834642 59835116 -85754172 + MLT1D LTR MaLR 13 486 -19 1918 179 28 8 chr10 59835124 59835482 -85753806 - MLT1A1 LTR MaLR 0 365 1 26 50 0 0 chr10 59836401 59836441 -85752847 + AT_rich Low_complexity Low_complexity 1 40 0 287 226 103 65 chr10 59836483 59836638 -85752650 - L1MC5 LINE L1 -106 7855 7695 574 258 59 38 chr10 59836803 59837144 -85752144 - L1MC5 LINE L1 -657 7304 6957 890 261 3 79 chr10 59837186 59837539 -85751749 - L1MC5 LINE L1 -1000 6961 6636 653 256 136 6 chr10 59837542 59837718 -85751570 - MLT1D LTR MaLR 0 505 307 1301 232 69 0 chr10 59837906 59838195 -85751093 + AluJo SINE Alu 4 312 0 42 0 0 0 chr10 59838304 59838346 -85750942 + AT_rich Low_complexity Low_complexity 1 42 0 23 0 0 0 chr10 59839569 59839592 -85749696 + AT_rich Low_complexity Low_complexity 1 23 0 6254 75 3 23 chr10 59840222 59841389 -85747899 - L1PA8A LINE L1 -27 6104 4960 3034 122 17 13 chr10 59841386 59841860 -85747428 + L1P3 LINE L1 3 478 -5397 * 499 265 90 12 chr10 59843146 59843312 -85745976 - MIR SINE MIR -82 180 2 28 86 0 0 chr10 59843842 59843912 -85745376 + AT_rich Low_complexity Low_complexity 1 70 0 25 0 0 0 chr10 59844666 59844691 -85744597 + AT_rich Low_complexity Low_complexity 1 25 0 2498 137 21 0 chr10 59844692 59845114 -85744174 - L1MA3 LINE L1 -1 6304 5874 14201 144 25 8 chr10 59845116 59847453 -85741835 - L1M1 LINE L1 -4090 3475 1099 488 126 33 159 chr10 59847450 59847601 -85741687 - L1M1 LINE L1 -7432 133 2 * 2052 148 0 0 chr10 59847940 59848237 -85741051 + AluJo SINE Alu 1 297 -15 369 0 0 0 chr10 59849468 59849509 -85739779 + (TA)n Simple_repeat Simple_repeat 2 42 0 1347 125 69 5 chr10 59849686 59849902 -85739386 + MER30 DNA MER1_type 1 230 0 263 341 24 16 chr10 59849977 59850103 -85739185 + L2 LINE L2 3146 3272 0 364 306 46 58 chr10 59850281 59850454 -85738834 - L2 LINE L2 -560 2754 2584 23 54 0 0 chr10 59851494 59851531 -85737757 + AT_rich Low_complexity Low_complexity 1 37 0 905 232 41 1 chr10 59852300 59852665 -85736623 + MER34 LTR ERV1 31 441 -101 375 60 0 0 chr10 59853879 59853929 -85735359 + (TG)n Simple_repeat Simple_repeat 1 50 0 425 324 106 6 chr10 59854736 59854906 -85734382 + L2 LINE L2 2898 3084 -229 20113 197 39 16 chr10 59854909 59858919 -85730369 + ERVL-B1 LTR ERVL 773 4878 -886 1521 148 46 14 chr10 59858898 59859181 -85730107 + ERVL-B1 LTR ERVL 5466 5757 -7 * 1537 270 15 45 chr10 59859181 59859647 -85729641 + MLT2B1 LTR ERVL 1 452 -68 252 0 0 0 chr10 59859653 59859681 -85729607 + (TC)n Simple_repeat Simple_repeat 1 28 0 268 200 0 0 chr10 59859686 59859731 -85729557 + ERVL LTR ERVL 5580 5624 -140 1105 178 0 6 chr10 59859759 59859939 -85729349 + ERVL LTR ERVL 5585 5763 -1 1290 280 113 13 chr10 59860005 59860476 -85728812 - MLT2B1 LTR ERVL -2 518 1 1096 128 18 0 chr10 59860476 59860640 -85728648 - ERVL-B1 LTR ERVL -7 5757 5591 23 54 0 0 chr10 59861031 59861068 -85728220 + AT_rich Low_complexity Low_complexity 1 37 0 470 266 91 80 chr10 59861722 59862008 -85727280 + MLT1F-int LTR MaLR 1023 1311 -60 527 272 22 7 chr10 59862057 59862193 -85727095 + MLT1F LTR MaLR 6 143 -399 183 162 0 0 chr10 59862413 59862450 -85726838 + (TCTA)n Simple_repeat Simple_repeat 4 40 0 255 103 0 0 chr10 59862651 59862690 -85726598 + (CA)n Simple_repeat Simple_repeat 1 39 0 2180 158 54 31 chr10 59862821 59863245 -85726043 + Tigger2a DNA MER2_type 1 434 0 717 187 35 18 chr10 59865752 59865923 -85723365 - L1MA10 LINE L1 -1 6333 6160 222 191 0 0 chr10 59866110 59866157 -85723131 + (TTCA)n Simple_repeat Simple_repeat 2 48 0 249 382 86 0 chr10 59867024 59867210 -85722078 + MIR SINE MIR 33 234 -28 449 232 27 127 chr10 59867458 59867678 -85721610 + MIR SINE MIR 47 244 -18 1716 158 0 49 chr10 59868732 59869060 -85720228 - AluJb SINE Alu 0 312 1 210 215 228 13 chr10 59869206 59869285 -85720003 + MIR SINE MIR 96 191 -71 611 326 98 0 chr10 59869957 59870181 -85719107 + MIR SINE MIR 2 247 -15 365 280 101 1 chr10 59870637 59870773 -85718515 + MIR SINE MIR 42 189 -63 2084 111 0 0 chr10 59871907 59872186 -85717102 + AluSx SINE Alu 1 279 -33 222 37 0 0 chr10 59872190 59872217 -85717071 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 25 0 0 0 chr10 59872236 59872261 -85717027 + AT_rich Low_complexity Low_complexity 1 25 0 588 340 113 70 chr10 59872477 59872980 -85716308 - L3 LINE CR1 -126 1451 971 970 252 9 0 chr10 59872980 59873198 -85716090 - MER58A DNA MER1_type -3 221 2 588 340 113 70 chr10 59873198 59873657 -85715631 - L3 LINE CR1 -606 971 447 38 51 0 0 chr10 59873924 59873983 -85715305 + AT_rich Low_complexity Low_complexity 1 59 0 35980 36 0 0 chr10 59874848 59880044 -85709244 - L1PA3 LINE L1 -3 6152 957 459 0 0 0 chr10 59880580 59880631 -85708657 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 1832 146 3 10 chr10 59880631 59880919 -85708369 - AluJb SINE Alu -26 286 1 395 287 46 46 chr10 59880978 59881173 -85708115 - L1MC/D LINE L1 -2156 5652 5458 23 33 0 0 chr10 59883474 59883504 -85705784 + AT_rich Low_complexity Low_complexity 1 30 0 886 182 0 0 chr10 59883596 59883744 -85705544 - L1M4 LINE L1 -533 5645 5498 * 1644 179 16 116 chr10 59883741 59883950 -85705338 - L1M4 LINE L1 -604 5580 5352 396 0 0 0 chr10 59883950 59883994 -85705294 + (TA)n Simple_repeat Simple_repeat 1 44 0 1644 179 16 116 chr10 59883994 59884575 -85704713 - L1M4 LINE L1 -832 5352 4858 198 103 0 0 chr10 59884639 59884668 -85704620 + (A)n Simple_repeat Simple_repeat 1 29 0 1387 6 18 0 chr10 59884838 59885005 -85704283 + (TTTC)n Simple_repeat Simple_repeat 2 171 0 180 0 0 0 chr10 59885005 59885025 -85704263 + (TTTTC)n Simple_repeat Simple_repeat 3 22 0 716 21 21 0 chr10 59885082 59885175 -85704113 + (TTTC)n Simple_repeat Simple_repeat 1 95 0 296 281 50 58 chr10 59885175 59885296 -85703992 - MIR3 SINE MIR -75 133 14 1368 273 109 25 chr10 59885442 59885965 -85703323 + MLT1E LTR MaLR 25 591 -2 476 119 0 10 chr10 59886136 59886237 -85703051 + (TA)n Simple_repeat Simple_repeat 1 100 0 213 209 0 0 chr10 59886307 59886350 -85702938 + (TG)n Simple_repeat Simple_repeat 2 44 0 181 255 59 20 chr10 59888697 59888748 -85700540 - L2 LINE L2 -10 3303 3251 186 43 0 0 chr10 59889373 59889396 -85699892 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 402 317 84 90 chr10 59889804 59890280 -85699008 + HAL1b LINE L1 16 488 -860 314 330 0 0 chr10 59890342 59890442 -85698846 + (CA)n Simple_repeat Simple_repeat 1 100 0 2510 214 54 2 chr10 59890718 59891233 -85698055 - MER44D DNA MER2_type 0 605 9 431 235 60 38 chr10 59891302 59891398 -85697890 + L1MC5 LINE L1 7053 7145 -816 1894 203 59 40 chr10 59891398 59891926 -85697362 + MER67A LTR ERV1 4 541 -2 431 235 60 38 chr10 59891926 59892012 -85697276 + L1MC5 LINE L1 7145 7239 -722 277 270 60 49 chr10 59892255 59892440 -85696848 + L1ME3A LINE L1 5961 6147 -23 439 264 32 55 chr10 59892750 59893038 -85696250 - L1ME LINE L1 -5765 305 26 2175 105 0 0 chr10 59893536 59893821 -85695467 - AluSq SINE Alu -28 285 1 287 315 44 61 chr10 59894158 59894339 -85694949 + MLT1J2 LTR MaLR 15 192 -258 206 150 0 25 chr10 59895018 59895058 -85694230 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 1371 303 70 14 chr10 59895069 59895554 -85693734 - MLT1G LTR MaLR -68 522 11 21 36 0 0 chr10 59897289 59897317 -85691971 + AT_rich Low_complexity Low_complexity 1 28 0 6076 226 25 2 chr10 59897381 59898777 -85690511 - L1P LINE L1 -1137 5009 3582 2063 245 18 4 chr10 59898782 59899271 -85690017 - L1PA13 LINE L1 -4965 1822 1327 2020 295 62 57 chr10 59899255 59900039 -85689249 - L1PA13 LINE L1 -5877 910 120 * 2459 59 3 0 chr10 59900039 59900342 -85688946 - AluY SINE Alu -7 304 1 2020 295 62 57 chr10 59900342 59900463 -85688825 - L1PA13 LINE L1 -6667 120 1 215 212 0 30 chr10 59901278 59901344 -85687944 + (CATA)n Simple_repeat Simple_repeat 2 65 0 335 330 124 26 chr10 59901370 59901564 -85687724 - MIR SINE MIR -43 219 7 22 35 0 0 chr10 59902243 59902272 -85687016 + AT_rich Low_complexity Low_complexity 1 29 0 497 321 77 33 chr10 59902290 59902550 -85686738 - MLT1J LTR MaLR -128 383 107 2135 112 20 0 chr10 59902550 59902855 -85686433 - AluSx SINE Alu -1 311 1 497 321 77 33 chr10 59902855 59902893 -85686395 - MLT1J LTR MaLR -404 107 72 25 0 0 0 chr10 59903765 59903790 -85685498 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr10 59903970 59903999 -85685289 + AT_rich Low_complexity Low_complexity 1 29 0 1927 154 3 0 chr10 59904152 59904437 -85684851 + AluSx SINE Alu 1 286 -26 222 235 0 29 chr10 59904499 59904567 -85684721 + (TATATG)n Simple_repeat Simple_repeat 5 70 0 182 309 81 24 chr10 59906657 59906780 -85682508 + MIR SINE MIR 132 261 -1 192 77 0 0 chr10 59906817 59906843 -85682445 + (TCC)n Simple_repeat Simple_repeat 2 27 0 2289 112 13 33 chr10 59907020 59907413 -85681875 - L1MA4A LINE L1 -4 6299 5915 8029 227 29 16 chr10 59907413 59909208 -85680080 - L1M2 LINE L1 -4623 2226 409 28 29 0 0 chr10 59909480 59909515 -85679773 + AT_rich Low_complexity Low_complexity 1 35 0 260 325 75 40 chr10 59909515 59909606 -85679682 - MLT1G-int LTR MaLR -866 505 419 1786 179 11 20 chr10 59909606 59909953 -85679335 - MER2 DNA MER2_type 0 344 1 260 325 75 40 chr10 59909953 59910089 -85679199 - MLT1G-int LTR MaLR -952 419 270 1755 280 62 11 chr10 59910176 59910729 -85678559 - MLT1G LTR MaLR 0 590 10 312 229 60 15 chr10 59910736 59910879 -85678409 - L1M LINE L1 -761 5403 5285 375 301 132 4 chr10 59911009 59911281 -85678007 - HAL1 LINE L1 -1041 1466 1160 351 181 0 0 chr10 59911719 59911791 -85677497 + (TATG)n Simple_repeat Simple_repeat 2 73 0 585 57 68 0 chr10 59911840 59911928 -85677360 - L1PA11 LINE L1 -4 6170 6077 22 0 0 0 chr10 59913148 59913170 -85676118 + AT_rich Low_complexity Low_complexity 1 22 0 638 308 46 0 chr10 59913555 59913750 -85675538 + MIR SINE MIR 58 261 -1 386 368 18 18 chr10 59913909 59914075 -85675213 - MLT1K LTR MaLR -235 353 188 237 297 55 22 chr10 59914388 59914479 -85674809 + LTR50 LTR ERVL 122 215 -580 360 263 35 129 chr10 59914567 59914799 -85674489 + LTR50 LTR ERVL 463 672 -123 312 316 79 0 chr10 59915111 59915250 -85674038 + MIR SINE MIR 53 202 -60 213 236 11 34 chr10 59915324 59915413 -85673875 + A-rich Low_complexity Low_complexity 6 92 0 817 272 50 27 chr10 59916024 59916322 -85672966 - MER58B DNA MER1_type -15 326 22 276 102 0 18 chr10 59916448 59916498 -85672790 - MLT2B1 LTR ERVL 0 520 486 272 226 54 24 chr10 59916502 59916670 -85672618 + (TAGA)n Simple_repeat Simple_repeat 2 174 0 2027 189 135 9 chr10 59916670 59917099 -85672189 - MLT2B1 LTR ERVL -37 483 1 245 103 59 29 chr10 59917157 59917225 -85672063 + CT-rich Low_complexity Low_complexity 3 72 0 24 0 0 0 chr10 59917430 59917454 -85671834 + AT_rich Low_complexity Low_complexity 1 24 0 6632 75 5 0 chr10 59917465 59918314 -85670974 + L1P LINE L1 7 859 -5287 2090 179 37 29 chr10 59918515 59919034 -85670254 + L1MB8 LINE L1 5643 6165 -13 1290 239 95 65 chr10 59921160 59921686 -85667602 + MLT1F LTR MaLR 1 542 0 2216 132 3 3 chr10 59921884 59922224 -85667064 - L1PA15 LINE L1 -6 6810 6471 4429 32 0 0 chr10 59922224 59922746 -85666542 + L1PA4 LINE L1 5628 6154 -1 3416 96 2 8 chr10 59922746 59923238 -85666050 - L1PA15 LINE L1 -333 6483 5995 734 75 0 0 chr10 59923241 59923335 -85665953 - L1P4 LINE L1 -530 5635 5542 3776 211 22 3 chr10 59923341 59924192 -85665096 - L1PA15 LINE L1 -1071 5726 4860 434 145 0 13 chr10 59924192 59924268 -85665020 - L1PA15 LINE L1 -5293 1494 1420 1235 259 48 10 chr10 59924270 59924579 -85664709 - L1PA15 LINE L1 -5304 1483 1163 242 264 19 0 chr10 59924659 59924712 -85664576 - MIR SINE MIR -156 106 53 405 284 205 0 chr10 59925337 59925527 -85663761 + MIR SINE MIR 2 230 -32 293 269 15 0 chr10 59925832 59925899 -85663389 + MER96 DNA MER1_type? 107 174 -1 232 316 60 83 chr10 59926441 59926609 -85662679 + L3 LINE CR1 1259 1422 -155 446 317 80 44 chr10 59927068 59927317 -85661971 - MIR SINE MIR -2 260 3 272 268 175 0 chr10 59927342 59927439 -85661849 - MIR SINE MIR -74 188 75 668 108 20 0 chr10 59928792 59928894 -85660394 - AluSg/x SINE Alu -13 297 194 32 0 0 0 chr10 59929335 59929367 -85659921 + AT_rich Low_complexity Low_complexity 1 32 0 643 332 28 12 chr10 59929774 59930024 -85659264 + MIR SINE MIR 3 256 -6 242 346 26 0 chr10 59930631 59930709 -85658579 - MLT1I LTR MaLR -119 290 211 237 91 0 0 chr10 59930718 59930751 -85658537 - L1PA15 LINE L1 -6413 384 352 6456 85 7 1 chr10 59930751 59931931 -85657357 + L1PA7 LINE L1 4952 6136 -18 414 0 0 0 chr10 59931933 59931979 -85657309 + (TA)n Simple_repeat Simple_repeat 2 47 0 468 256 128 0 chr10 59932004 59932137 -85657151 - MLT1I LTR MaLR -255 154 5 217 109 43 0 chr10 59933868 59933914 -85655374 + GA-rich Low_complexity Low_complexity 1 48 0 265 239 33 22 chr10 59933918 59934010 -85655278 + L1M4 LINE L1 3286 3378 -2768 1073 295 98 22 chr10 59934066 59935115 -85654173 - L1ME LINE L1 -555 5609 4480 257 295 13 0 chr10 59935382 59935460 -85653828 + L1M4 LINE L1 4769 4847 -1299 337 302 101 22 chr10 59936520 59936659 -85652629 + MIR3 SINE MIR 2 151 -57 23 54 0 0 chr10 59938508 59938545 -85650743 + AT_rich Low_complexity Low_complexity 1 37 0 183 237 51 34 chr10 59938720 59938779 -85650509 + MER5A DNA MER1_type 38 97 -92 4132 171 7 0 chr10 59938944 59939692 -85649596 - L1P LINE L1 -1451 4695 3943 1593 135 3 64 chr10 59939693 59940004 -85649284 + L1PA14 LINE L1 5861 6152 -9 269 284 41 66 chr10 59942658 59942855 -85646433 - MLT1E-int LTR MaLR -488 883 692 1293 275 11 5 chr10 59943046 59943424 -85645864 - MLT1E-int LTR MaLR -765 606 227 1595 280 138 0 chr10 59943487 59944008 -85645280 - MLT1E LTR MaLR 0 593 1 2221 140 11 17 chr10 59944137 59944494 -85644794 + THE1B LTR MaLR 1 355 -9 11253 113 4 4 chr10 59944494 59945919 -85643369 + THE1B-int LTR MaLR 2 1429 -151 3185 77 24 26 chr10 59945919 59946373 -85642915 + MLT2A2 LTR ERVL 1 453 0 11253 113 4 4 chr10 59946373 59946526 -85642762 + THE1B-int LTR MaLR 1428 1580 0 2343 127 5 22 chr10 59946526 59946896 -85642392 + THE1B LTR MaLR 1 364 0 25 0 0 0 chr10 59947649 59947674 -85641614 + AT_rich Low_complexity Low_complexity 1 25 0 396 276 94 20 chr10 59949243 59949446 -85639842 - L1ME LINE L1 -1868 4278 4061 371 287 28 21 chr10 59950128 59950285 -85639003 + MLT1E LTR MaLR 14 213 -336 387 218 94 82 chr10 59950475 59950645 -85638643 + MLT1E LTR MaLR 421 592 -1 29 0 0 0 chr10 59951380 59951409 -85637879 + AT_rich Low_complexity Low_complexity 1 29 0 2107 165 101 3 chr10 59951434 59951822 -85637466 - MSTC LTR MaLR -2 426 1 601 237 7 22 chr10 59951861 59951996 -85637292 - FLAM_A SINE Alu 0 133 1 1105 228 10 28 chr10 59952006 59952296 -85636992 - L1MD2 LINE L1 -3 6356 6072 * 1383 213 26 4 chr10 59952294 59952659 -85636629 - L1MD2 LINE L1 -743 5403 5176 1044 280 14 17 chr10 59952651 59952940 -85636348 - L1MDb LINE L1 -6079 330 43 * 287 331 52 29 chr10 59953880 59954052 -85635236 - MIR SINE MIR 0 262 87 1974 143 0 16 chr10 59954116 59954424 -85634864 + AluSq SINE Alu 1 303 -10 2710 85 3 0 chr10 59954542 59954896 -85634392 - THE1A LTR MaLR 0 355 1 11167 108 5 1 chr10 59954896 59956470 -85632818 - THE1A-int LTR MaLR 0 1580 1 2616 102 3 0 chr10 59956470 59956824 -85632464 - THE1A LTR MaLR 0 355 1 1951 173 71 25 chr10 59958551 59958945 -85630343 - LTR47A LTR ERVL 0 452 41 22 0 0 0 chr10 59959006 59959028 -85630260 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr10 59959218 59959249 -85630039 + AT_rich Low_complexity Low_complexity 1 31 0 655 290 27 27 chr10 59959249 59959470 -85629818 - MIR SINE MIR -1 261 41 22 0 0 0 chr10 59960107 59960129 -85629159 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr10 59961212 59961241 -85628047 + AT_rich Low_complexity Low_complexity 1 29 0 182 222 22 0 chr10 59961512 59961557 -85627731 + L2 LINE L2 3268 3313 0 341 387 36 31 chr10 59962243 59962468 -85626820 + MLT1K LTR MaLR 28 253 -335 356 39 0 20 chr10 59962474 59962525 -85626763 + (TTTTA)n Simple_repeat Simple_repeat 1 50 0 10225 23 1 19 chr10 59962525 59964510 -85624778 - L1PA3 LINE L1 -24 6131 4183 * 10362 28 2 0 chr10 59964505 59965756 -85623532 + L1PA3 LINE L1 2927 4179 -1967 854 160 0 0 chr10 59965756 59965887 -85623401 - FLAM_C SINE Alu -2 131 1 268 273 103 73 chr10 59965895 59966060 -85623228 + MLT1K LTR MaLR 260 429 -159 354 61 0 0 chr10 59966442 59966491 -85622797 + (CA)n Simple_repeat Simple_repeat 2 50 0 388 318 0 0 chr10 59966640 59966750 -85622538 + MER94 DNA DNA 15 124 -10 263 321 12 24 chr10 59967431 59967515 -85621773 + MIR SINE MIR 31 113 -95 23 0 0 0 chr10 60067642 60067665 -85521623 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr10 60067845 60067874 -85521414 + AT_rich Low_complexity Low_complexity 1 29 0 1953 157 3 0 chr10 60068027 60068313 -85520975 + AluSx SINE Alu 1 287 -25 214 312 18 28 chr10 60068466 60068575 -85520713 + CT-rich Low_complexity Low_complexity 6 113 0 1139 199 4 71 chr10 60068960 60069187 -85520101 - MER82 DNA MER2_type -390 263 22 212 0 36 0 chr10 60069187 60069215 -85520073 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1890 160 4 4 chr10 60069219 60069500 -85519788 - AluJo SINE Alu -31 281 1 1139 199 4 71 chr10 60069500 60069548 -85519740 - MER82 DNA MER2_type -634 19 2 219 234 0 0 chr10 60069582 60069629 -85519659 - MIR SINE MIR -111 151 105 695 306 123 18 chr10 60070288 60070628 -85518660 - L2 LINE L2 -36 3236 2861 1744 201 0 6 chr10 60071145 60071459 -85517829 + AluJo SINE Alu 1 312 0 325 323 69 15 chr10 60071550 60071680 -85517608 + MIR SINE MIR 62 198 -64 28 61 0 0 chr10 60071966 60072015 -85517273 + AT_rich Low_complexity Low_complexity 1 49 0 612 321 65 0 chr10 60072347 60072562 -85516726 - LTR33 LTR ERVL -292 229 1 362 295 88 36 chr10 60075026 60075219 -85514069 - MLT1H1 LTR MaLR -292 263 61 21 0 0 0 chr10 60075565 60075586 -85513702 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr10 60076099 60076127 -85513161 + AT_rich Low_complexity Low_complexity 1 28 0 35 41 0 0 chr10 60076433 60076482 -85512806 + AT_rich Low_complexity Low_complexity 1 49 0 602 332 91 8 chr10 60076741 60076982 -85512306 - MIR SINE MIR 0 262 2 2643 229 15 30 chr10 60077626 60077844 -85511444 + MER82 DNA MER2_type 8 228 -425 5523 108 9 0 chr10 60077844 60078189 -85511099 - L1PB1 LINE L1 0 6151 5811 249 33 0 0 chr10 60078189 60078219 -85511069 + (TA)n Simple_repeat Simple_repeat 2 31 0 5523 108 9 0 chr10 60078219 60078808 -85510480 - L1PB1 LINE L1 -340 5811 5190 2643 229 15 30 chr10 60078808 60079244 -85510044 + MER82 DNA MER2_type 228 652 -1 2458 222 42 44 chr10 60079842 60080437 -85508851 - MER77 LTR ERV1 -11 594 1 2941 83 4 135 chr10 60080973 60081493 -85507795 - MLT2A2 LTR ERVL -1 452 1 266 236 57 85 chr10 60081523 60081629 -85507659 - MIR SINE MIR -2 260 158 279 373 16 16 chr10 60081824 60081950 -85507338 - MIR SINE MIR -135 127 2 21 71 0 0 chr10 60082913 60082955 -85506333 + AT_rich Low_complexity Low_complexity 1 42 0 778 183 72 61 chr10 60083095 60083275 -85506013 - L1PB4 LINE L1 -13 6143 5962 243 103 26 0 chr10 60083482 60083521 -85505767 + MADE1 DNA Mariner 2 41 -39 2274 85 0 0 chr10 60083997 60084290 -85504998 - AluY SINE Alu -18 293 1 184 340 0 0 chr10 60084416 60084463 -85504825 + MER5A DNA MER1_type 55 101 -88 22 35 0 0 chr10 60084760 60084789 -85504499 + AT_rich Low_complexity Low_complexity 1 29 0 1966 133 51 24 chr10 60085353 60085684 -85503604 + THE1B LTR MaLR 1 340 -24 1535 266 24 31 chr10 60086351 60086803 -85502485 - MER110 LTR ERV1 -40 451 3 2269 309 86 35 chr10 60087759 60089117 -85500171 + L1PBa LINE L1 6 1433 -5430 268 184 51 0 chr10 60089181 60089279 -85500009 + (TA)n Simple_repeat Simple_repeat 1 103 0 2139 124 18 54 chr10 60089280 60089666 -85499622 + L1PB3 LINE L1 5783 6154 0 24 32 0 0 chr10 60089688 60089719 -85499569 + AT_rich Low_complexity Low_complexity 1 31 0 282 314 97 8 chr10 60090497 60090621 -85498667 - MLT1K LTR MaLR -326 262 128 344 252 7 0 chr10 60091376 60091515 -85497773 + (TA)n Simple_repeat Simple_repeat 2 141 0 203 0 0 36 chr10 60091825 60091853 -85497435 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 3806 204 36 57 chr10 60093596 60094680 -85494608 + L1MA10 LINE L1 5274 6334 0 1935 160 6 12 chr10 60095454 60095785 -85493503 + MER7C DNA MER2_type 18 346 -256 2669 24 0 0 chr10 60096041 60096335 -85492953 + AluYb8 SINE Alu 1 294 -24 239 254 0 0 chr10 60096719 60096782 -85492506 + (TA)n Simple_repeat Simple_repeat 1 63 0 4754 68 16 5 chr10 60096782 60097404 -85491884 - L1PA7 LINE L1 -15 6139 5511 2193 39 21 0 chr10 60097404 60097688 -85491600 + L1P3 LINE L1 5264 5553 -601 26 30 0 0 chr10 60097814 60097847 -85491441 + AT_rich Low_complexity Low_complexity 1 33 0 359 238 10 69 chr10 60098179 60098280 -85491008 + MER5A DNA MER1_type 18 112 -77 10391 108 1 5 chr10 60098421 60099882 -85489406 + HERV9 LTR ERV1 1742 3197 -5202 5954 93 13 13 chr10 60099873 60101126 -85488162 + HERV9 LTR ERV1 7072 8399 0 * 232 269 0 0 chr10 60101126 60101178 -85488110 + LTR30 LTR ERV1 1 52 -670 1947 107 126 224 chr10 60101178 60101766 -85487522 + LTR12 LTR ERV1 53 582 -132 447 19 0 0 chr10 60102603 60102655 -85486633 + (CA)n Simple_repeat Simple_repeat 1 52 0 381 313 6 18 chr10 60103529 60103695 -85485593 - L2 LINE L2 -1536 1778 1615 5600 124 5 53 chr10 60103744 60104558 -85484730 + THE1C-int LTR MaLR 705 1472 -108 5783 123 9 2 chr10 60104558 60105933 -85483355 + L1PA8 LINE L1 4785 6167 -5 5600 124 5 53 chr10 60105933 60106038 -85483250 + THE1C-int LTR MaLR 1472 1580 0 1731 174 86 14 chr10 60106038 60106388 -85482900 + THE1C LTR MaLR 1 375 0 1152 186 35 0 chr10 60106646 60106877 -85482411 - Tigger3(Golem) DNA MER2_type 0 3029 2791 1311 172 8 21 chr10 60107793 60108031 -85481257 + MER2 DNA MER2_type 1 235 -110 1782 163 0 10 chr10 60108516 60108804 -85480484 - AluJo SINE Alu -27 285 1 500 236 30 65 chr10 60108804 60109067 -85480221 - LTR37B LTR ERV1 -4 464 211 267 190 25 124 chr10 60109240 60109361 -85479927 - LTR37B LTR ERV1 -359 109 1 219 233 0 0 chr10 60110734 60110777 -85478511 + (CA)n Simple_repeat Simple_repeat 2 44 0 39 0 0 0 chr10 60111839 60111878 -85477410 + AT_rich Low_complexity Low_complexity 1 39 0 446 103 0 0 chr10 60111878 60111946 -85477342 - L1MA1 LINE L1 -7 6295 6228 318 67 0 44 chr10 60111946 60111991 -85477297 + L1MA1 LINE L1 6178 6220 -82 655 241 13 95 chr10 60112344 60112576 -85476712 + MIR SINE MIR 24 236 -26 3768 151 56 31 chr10 60112841 60113607 -85475681 + LTR1 LTR ERV1 1 785 0 431 336 97 18 chr10 60114615 60114832 -85474456 + MIR SINE MIR 28 261 -1 234 226 60 0 chr10 60118754 60118838 -85470450 + L1ME LINE L1 825 913 -5292 25 75 0 0 chr10 60119047 60119100 -85470188 + AT_rich Low_complexity Low_complexity 1 53 0 233 209 15 0 chr10 60119264 60119331 -85469957 + (CA)n Simple_repeat Simple_repeat 2 69 0 2222 201 78 24 chr10 60119341 60120307 -85468981 + L1ME LINE L1 1411 5472 -743 7102 63 0 0 chr10 60119981 60121084 -85468204 + L1PA7 LINE L1 5146 6217 -6 304 299 6 6 chr10 60121147 60121304 -85467984 + L1M4c LINE L1 2329 2485 -3899 26 0 0 0 chr10 60122076 60122102 -85467186 + AT_rich Low_complexity Low_complexity 1 26 0 317 308 47 9 chr10 60123048 60123155 -85466133 + MIR SINE MIR 31 141 -121 3299 218 42 43 chr10 60123430 60124510 -85464778 - L1MD1 LINE L1 0 6242 5156 602 135 27 27 chr10 60124510 60124621 -85464667 - FLAM_C SINE Alu -9 134 24 1276 258 45 67 chr10 60124634 60125106 -85464182 - L1MD1 LINE L1 -982 5164 4714 2135 111 10 0 chr10 60125106 60125404 -85463884 - AluSx SINE Alu -7 305 5 1276 258 45 67 chr10 60125404 60125706 -85463582 - L1MD1 LINE L1 -1432 4714 4407 1879 269 61 6 chr10 60125789 60126463 -85462825 - L1MD1 LINE L1 -1888 4258 3548 2081 225 53 19 chr10 60126470 60127040 -85462248 + L1MC3 LINE L1 6503 7091 -694 244 253 51 0 chr10 60127045 60127124 -85462164 + MLT1F1 LTR MaLR 35 117 -450 770 240 10 20 chr10 60127158 60127358 -85461930 + L1MC3 LINE L1 7232 7429 -356 4077 67 6 0 chr10 60127868 60128394 -85460894 - L1PA7 LINE L1 0 6154 5626 23 33 0 0 chr10 60128594 60128624 -85460664 + AT_rich Low_complexity Low_complexity 1 30 0 542 326 23 32 chr10 60128698 60128919 -85460369 + MIR SINE MIR 34 252 -10 374 57 19 0 chr10 60129293 60129346 -85459942 + (TCTA)n Simple_repeat Simple_repeat 4 57 0 417 345 39 26 chr10 60129388 60129617 -85459671 - MIR SINE MIR -19 243 12 27 0 0 0 chr10 60130034 60130061 -85459227 + AT_rich Low_complexity Low_complexity 1 27 0 614 264 0 0 chr10 60131953 60132112 -85457176 - MER45B DNA AcHobo -724 316 699 228 133 0 0 chr10 60132141 60132186 -85457102 + LTR66 LTR ERVL 394 438 -172 1877 133 112 44 chr10 60132216 60132601 -85456687 - LTR57 LTR ERVL 0 411 1 8431 168 47 16 chr10 60132601 60134081 -85455207 - LTR57-int LTR ERVL 0 5343 3818 * 18066 164 22 14 chr10 60134077 60136551 -85452737 - LTR57-int LTR ERVL -2191 3152 646 201 94 0 0 chr10 60136551 60136583 -85452705 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 18066 164 22 14 chr10 60136583 60137235 -85452053 - LTR57-int LTR ERVL -4697 646 1 824 192 24 6 chr10 60137235 60137402 -85451886 - LTR57 LTR ERVL 0 411 242 348 97 0 125 chr10 60137417 60137489 -85451799 - LTR57 LTR ERVL -348 63 1 * 2456 243 45 56 chr10 60137489 60137858 -85451430 - MER45B DNA AcHobo -352 688 329 997 209 83 88 chr10 60137858 60138231 -85451057 + MLT1A2 LTR MaLR 1 371 -3 2456 243 45 56 chr10 60138231 60138557 -85450731 - MER45B DNA AcHobo -711 329 1 441 335 168 15 chr10 60140724 60141311 -85447977 + L2 LINE L2 2637 3313 0 334 341 23 23 chr10 60141631 60141763 -85447525 + MIR3 SINE MIR 15 146 -62 31 26 0 0 chr10 60141859 60141897 -85447391 + AT_rich Low_complexity Low_complexity 1 38 0 2658 161 37 12 chr10 60142280 60142765 -85446523 - LOR1a LTR ERV1 0 497 1 344 69 0 69 chr10 60143394 60143452 -85445836 + MADE1 DNA Mariner 1 54 -26 243 0 0 0 chr10 60143452 60143479 -85445809 + (CAAAAA)n Simple_repeat Simple_repeat 5 31 0 2327 54 3 44 chr10 60143493 60143808 -85445480 - AluSp SINE Alu -11 302 1 1503 199 12 25 chr10 60144358 60144679 -85444609 + MLT1A2 LTR MaLR 33 349 -25 10894 132 9 5 chr10 60144708 60147241 -85442047 - L1PA10 LINE L1 -16 6467 3921 1090 51 0 0 chr10 60147251 60147389 -85441899 - L1PA4 LINE L1 -3 6152 6015 3855 173 22 4 chr10 60147389 60148146 -85441142 - L1PA10 LINE L1 -2543 3918 3148 198 0 0 0 chr10 60148148 60148170 -85441118 + (TTA)n Simple_repeat Simple_repeat 3 24 0 10587 93 7 1 chr10 60148170 60150444 -85438844 - L1PA7 LINE L1 -18 6136 3855 5822 112 4 13 chr10 60150445 60152147 -85437141 + L1PA7 LINE L1 2221 3826 -2320 * 9225 188 20 51 chr10 60152146 60153900 -85435388 - L1PA10 LINE L1 -3305 3156 1537 2005 97 57 0 chr10 60153900 60154179 -85435109 - AluSx SINE Alu -17 295 1 9225 188 20 51 chr10 60154179 60155662 -85433626 - L1PA10 LINE L1 -4924 1537 10 240 111 0 0 chr10 60156221 60156257 -85433031 + (TA)n Simple_repeat Simple_repeat 2 37 0 248 278 0 0 chr10 60156257 60156347 -85432941 + L1MC4 LINE L1 6614 6703 -1339 2291 71 0 53 chr10 60158227 60158549 -85430739 + AluY SINE Alu 3 307 -4 1184 281 70 59 chr10 60159158 60159773 -85429515 - MER21B LTR ERV1 -127 804 86 183 114 0 0 chr10 60159773 60159808 -85429480 + (CAAA)n Simple_repeat Simple_repeat 3 37 0 1184 281 70 59 chr10 60159808 60159874 -85429414 - MER21B LTR ERV1 -845 86 22 407 325 55 0 chr10 60160004 60160169 -85429119 - MIR SINE MIR -35 227 55 465 322 69 6 chr10 60160243 60160417 -85428871 - MIR SINE MIR -49 213 29 632 228 126 0 chr10 60161324 60161491 -85427797 + MER5A DNA MER1_type 1 188 -1 1112 295 49 26 chr10 60161920 60162364 -85426924 + L1M3e LINE L1 576 1006 -6559 3381 267 50 37 chr10 60162412 60163995 -85425293 + L1M3e LINE L1 1867 3471 -4094 739 54 27 0 chr10 60163999 60164111 -85425177 + (GAAA)n Simple_repeat Simple_repeat 1 115 0 207 0 0 0 chr10 60164718 60164741 -85424547 + (T)n Simple_repeat Simple_repeat 1 23 0 288 327 39 10 chr10 60164845 60164949 -85424339 - MER91C DNA MER1_type -32 108 2 21 0 0 0 chr10 60165010 60165031 -85424257 + AT_rich Low_complexity Low_complexity 1 21 0 6652 80 17 7 chr10 60165032 60166054 -85423234 - L1PA8 LINE L1 -22 6150 5129 2064 245 14 37 chr10 60166836 60167552 -85421736 + L1MEc LINE L1 2170 2833 -3382 10719 214 56 14 chr10 60167553 60168038 -85421250 - L1M1 LINE L1 -5249 2316 1852 207 0 0 0 chr10 60168038 60168061 -85421227 + (TC)n Simple_repeat Simple_repeat 2 24 0 10719 214 56 14 chr10 60168061 60169781 -85419507 - L1M1 LINE L1 -5713 1852 20 772 203 0 7 chr10 60169785 60169933 -85419355 + Tigger7 DNA MER2_type 2441 2587 0 2000 138 6 6 chr10 60170679 60170991 -85418297 - AluSq SINE Alu -1 312 1 661 206 23 11 chr10 60172200 60172375 -85416913 + MER96B DNA MER1_type? 2 178 -239 234 302 123 19 chr10 60173334 60173440 -85415848 - MLT1K LTR MaLR -309 279 163 312 245 13 60 chr10 60173805 60173909 -85415379 - Charlie4 DNA MER1_type -3 1958 1862 432 55 0 0 chr10 60173909 60173964 -85415324 + (CA)n Simple_repeat Simple_repeat 2 56 0 312 245 13 60 chr10 60173964 60174010 -85415278 - Charlie4 DNA MER1_type -99 1862 1815 253 250 19 115 chr10 60174130 60174234 -85415054 + MER5B DNA MER1_type 84 177 -1 421 267 200 20 chr10 60174243 60174393 -85414895 - MER5A DNA MER1_type 0 189 13 22 0 0 0 chr10 60174611 60174633 -85414655 + AT_rich Low_complexity Low_complexity 1 22 0 633 259 104 0 chr10 60174693 60174944 -85414344 + L1MB5 LINE L1 2600 2876 -3270 2514 224 44 18 chr10 60174963 60176055 -85413233 + L1MB5 LINE L1 4856 5965 -209 276 149 0 0 chr10 60176065 60176112 -85413176 + (CCCCCT)n Simple_repeat Simple_repeat 5 51 0 183 299 46 46 chr10 60176143 60176230 -85413058 - MIR SINE MIR -144 118 32 603 210 136 34 chr10 60176361 60176537 -85412751 + L1MB5 LINE L1 5981 6174 0 702 181 14 67 chr10 60176931 60177141 -85412147 + MER33 DNA MER1_type 27 225 -99 959 256 19 31 chr10 60177248 60177506 -85411782 + MLT1A1 LTR MaLR 4 258 -107 * 1321 191 143 19 chr10 60177505 60177819 -85411469 - MLT1A1 LTR MaLR -12 353 1 299 319 174 5 chr10 60179894 60180101 -85409187 - MIR SINE MIR 0 262 21 189 0 0 0 chr10 60180787 60180808 -85408480 + (TAA)n Simple_repeat Simple_repeat 2 22 0 2747 97 23 5 chr10 60181011 60181402 -85407886 + MLT2A1 LTR ERVL 2 399 -45 230 230 27 0 chr10 60181403 60181477 -85407811 + L1MC4 LINE L1 6618 6693 -1349 286 125 0 36 chr10 60181479 60181535 -85407753 + MLT2A2 LTR ERVL 400 453 0 321 343 11 56 chr10 60182085 60182263 -85407025 + MIR SINE MIR 20 189 -73 342 239 83 46 chr10 60182544 60182653 -85406635 - L2 LINE L2 0 3272 3160 28 71 0 0 chr10 60183099 60183155 -85406133 + AT_rich Low_complexity Low_complexity 1 56 0 5799 68 4 1 chr10 60183176 60183931 -85405357 - L1PA7 LINE L1 -1 6153 5397 473 60 60 10 chr10 60183931 60184031 -85405257 + (TA)n Simple_repeat Simple_repeat 1 105 0 591 218 60 64 chr10 60185256 60185490 -85403798 + L1M4 LINE L1 4163 4395 -1751 1596 113 0 0 chr10 60185570 60185783 -85403505 + AluSx SINE Alu 1 213 -99 745 138 24 0 chr10 60185785 60185908 -85403380 + MER34 LTR ERV1 417 542 0 1636 276 70 151 chr10 60185940 60186811 -85402477 + L2 LINE L2 807 1747 -1567 1197 75 23 0 chr10 60186811 60186985 -85402303 - L1P3 LINE L1 -735 5437 5260 5108 65 0 5 chr10 60186985 60187640 -85401648 + L1PA8 LINE L1 5511 6166 -6 1636 276 70 151 chr10 60187640 60188400 -85400888 + L2 LINE L2 1745 2466 -848 1304 189 43 81 chr10 60188402 60188773 -85400515 - MLT1A1 LTR MaLR -2 363 7 1007 332 28 19 chr10 60188824 60189246 -85400042 + L2 LINE L2 2519 2944 -370 2016 129 3 7 chr10 60190187 60190481 -85398807 + AluSx SINE Alu 1 293 -19 273 160 30 40 chr10 60190616 60190716 -85398572 + (TA)n Simple_repeat Simple_repeat 2 100 0 22 0 0 0 chr10 60190899 60190921 -85398367 + AT_rich Low_complexity Low_complexity 1 22 0 272 359 109 13 chr10 60190971 60191127 -85398161 - L3 LINE CR1 -160 1417 1247 2332 78 0 23 chr10 60191140 60191448 -85397840 - AluY SINE Alu -5 306 6 1548 232 39 32 chr10 60191454 60191916 -85397372 + L1MA9 LINE L1 4848 5312 -834 2457 135 21 5 chr10 60191951 60192387 -85396901 - L1MA2 LINE L1 -2 6302 5860 41254 63 4 2 chr10 60192388 60198525 -85390763 + L1PA5 LINE L1 1 6150 -4 3157 123 10 8 chr10 60198532 60199021 -85390267 - L1MA2 LINE L1 -432 5873 5384 2528 186 21 39 chr10 60199020 60199586 -85389702 + L1MA9 LINE L1 5299 5854 -458 * 344 339 16 32 chr10 60199727 60199916 -85389372 + MIR SINE MIR 54 239 -23 28 29 0 0 chr10 60200105 60200140 -85389148 + AT_rich Low_complexity Low_complexity 1 35 0 2542 148 24 10 chr10 60200615 60201026 -85388262 + MSTA LTR MaLR 1 417 -11 312 342 26 9 chr10 60201454 60201568 -85387720 - MIR SINE MIR -116 146 31 3756 136 12 18 chr10 60201780 60202484 -85386804 + L1PA15 LINE L1 5166 5864 -301 1219 175 0 5 chr10 60202501 60202712 -85386576 + L1PA15 LINE L1 5956 6165 0 260 274 53 0 chr10 60203378 60203473 -85385815 + L1ME LINE L1 5743 5842 -279 533 220 120 0 chr10 60203476 60203626 -85385662 + MER3 DNA MER1_type 2 122 -87 44 35 0 0 chr10 60203917 60203975 -85385313 + AT_rich Low_complexity Low_complexity 1 58 0 24 0 0 0 chr10 60204891 60204915 -85384373 + AT_rich Low_complexity Low_complexity 1 24 0 2025 113 27 3 chr10 60205362 60205654 -85383634 + AluSq SINE Alu 1 299 -14 2186 102 3 0 chr10 60205911 60206204 -85383084 + AluSg SINE Alu 1 294 -16 275 303 110 39 chr10 60206745 60206900 -85382388 - MIR3 SINE MIR -27 181 16 26 0 0 0 chr10 60207948 60207974 -85381314 + AT_rich Low_complexity Low_complexity 1 26 0 30 45 0 0 chr10 60208222 60208266 -85381022 + AT_rich Low_complexity Low_complexity 1 44 0 1074 297 86 44 chr10 60208287 60209178 -85380110 + L1M4 LINE L1 3506 4434 -1712 316 259 60 52 chr10 60209199 60209315 -85379973 + L2 LINE L2 2589 2705 -609 744 227 173 18 chr10 60209317 60209537 -85379751 - MLT1D LTR MaLR 0 505 252 397 299 126 17 chr10 60209564 60209795 -85379493 + L2 LINE L2 2891 3146 -167 317 338 59 0 chr10 60209860 60209996 -85379292 - MER46C DNA MER2_type -115 223 80 408 296 40 33 chr10 60210074 60210226 -85379062 + L2 LINE L2 3161 3313 0 21 36 0 0 chr10 60210287 60210315 -85378973 + AT_rich Low_complexity Low_complexity 1 28 0 976 121 6 52 chr10 60210428 60210601 -85378687 + THE1C LTR MaLR 4 168 -207 1146 122 24 38 chr10 60210694 60210907 -85378381 + THE1C LTR MaLR 162 371 -4 377 208 0 12 chr10 60211408 60211500 -85377788 - L1ME1 LINE L1 0 6164 6077 657 233 23 0 chr10 60211514 60211647 -85377641 + AluJo SINE Alu 3 138 -174 1373 237 111 49 chr10 60211652 60212222 -85377066 - L1ME1 LINE L1 -104 6062 5458 312 217 50 94 chr10 60212223 60212403 -85376885 + L1ME1 LINE L1 5794 5965 -201 1351 272 109 10 chr10 60212497 60213472 -85375816 - L1ME1 LINE L1 -697 5473 4374 1615 271 40 59 chr10 60213477 60213987 -85375301 - L1ME1 LINE L1 -5 6161 5670 1252 191 76 29 chr10 60213987 60214264 -85375024 + AluJo SINE Alu 2 291 -21 1615 271 40 59 chr10 60214264 60214544 -85374744 - L1ME1 LINE L1 -496 5670 5386 552 278 53 25 chr10 60214651 60214971 -85374317 - L1ME1 LINE L1 -912 5234 4906 754 272 45 47 chr10 60215061 60215443 -85373845 - L1MCc LINE L1 -6018 405 25 192 167 0 0 chr10 60216310 60216358 -85372930 + (TA)n Simple_repeat Simple_repeat 2 49 0 11000 32 7 0 chr10 60217307 60218657 -85370631 - L1PA3 LINE L1 -2105 4041 2683 11407 25 0 0 chr10 60218657 60220780 -85368508 + L1PA3 LINE L1 4028 6152 -3 31 0 0 0 chr10 60220780 60220811 -85368477 + AT_rich Low_complexity Low_complexity 1 31 0 44 35 0 0 chr10 60222039 60222097 -85367191 + AT_rich Low_complexity Low_complexity 1 58 0 273 304 49 0 chr10 60223027 60223129 -85366159 - MER103 DNA DNA -49 117 11 722 280 4 18 chr10 60223313 60223538 -85365750 + MER58A DNA MER1_type 3 224 0 24 32 0 0 chr10 60223816 60223847 -85365441 + AT_rich Low_complexity Low_complexity 1 31 0 3208 21 3 0 chr10 60224337 60224714 -85364574 - L1PA2 LINE L1 -4 6151 5774 400 230 26 9 chr10 60225196 60225309 -85363979 - MER53 DNA DNA -2 187 73 1236 272 68 20 chr10 60225362 60225800 -85363488 - MLT1D LTR MaLR -46 459 1 402 245 90 45 chr10 60225863 60226018 -85363270 + MER5B DNA MER1_type 7 168 -10 1311 218 51 9 chr10 60226108 60226443 -85362845 - L1MB7 LINE L1 -31 6153 5805 361 143 0 0 chr10 60226443 60226499 -85362789 - MER53 DNA DNA -133 56 1 1093 293 66 32 chr10 60226684 60227155 -85362133 + MLT1J LTR MaLR 20 506 -5 399 41 0 0 chr10 60227172 60227221 -85362067 + (CA)n Simple_repeat Simple_repeat 1 49 0 704 236 84 56 chr10 60227485 60227807 -85361481 - L1MC4 LINE L1 -181 7861 7531 502 174 46 0 chr10 60227840 60227949 -85361339 + L1MC4 LINE L1 6974 7087 -955 2092 186 87 30 chr10 60228626 60229099 -85360189 - MLT1D LTR MaLR 0 505 6 1070 225 1 80 chr10 60230488 60230848 -85358440 - L1MA10 LINE L1 -2 6332 6002 25 0 0 0 chr10 60231197 60231222 -85358066 + AT_rich Low_complexity Low_complexity 1 25 0 1374 220 34 40 chr10 60231509 60231622 -85357666 - MER7A DNA MER2_type -2692 346 234 1865 155 24 21 chr10 60231622 60231958 -85357330 + MER1B DNA MER1_type 1 337 0 1374 220 34 40 chr10 60231958 60232194 -85357094 - MER7A DNA MER2_type -2804 234 1 1668 61 0 5 chr10 60232448 60232662 -85356626 - AluY SINE Alu 0 311 99 388 20 0 0 chr10 60232662 60232712 -85356576 - AluY SINE Alu -249 50 1 2360 45 21 0 chr10 60233174 60233465 -85355823 + AluY SINE Alu 1 297 -14 312 289 118 0 chr10 60233797 60233949 -85355339 - MIR SINE MIR -14 248 79 335 307 65 26 chr10 60234550 60234703 -85354585 + MIR SINE MIR 103 261 -1 192 200 0 0 chr10 60235295 60235340 -85353948 + (TAGA)n Simple_repeat Simple_repeat 1 45 0 6063 111 8 9 chr10 60235429 60236338 -85352950 - L1PA10 LINE L1 -7 6161 5254 1571 182 21 29 chr10 60236345 60236725 -85352563 - L1P LINE L1 -2646 3500 3124 324 0 0 0 chr10 60236896 60236932 -85352356 + (CA)n Simple_repeat Simple_repeat 1 36 0 3540 17 7 0 chr10 60237400 60237809 -85351479 - L1PA4 LINE L1 -208 5947 5536 1626 44 0 0 chr10 60237810 60238014 -85351274 + L1PA4 LINE L1 5949 6152 -3 514 321 130 14 chr10 60238876 60239091 -85350197 - MIR SINE MIR -6 256 17 1183 95 0 0 chr10 60240222 60240380 -85348908 + AluY SINE Alu 144 301 -10 199 211 0 0 chr10 60240481 60240519 -85348769 + L2 LINE L2 3276 3313 0 1720 164 7 24 chr10 60241614 60241906 -85347382 - THE1B LTR MaLR -77 287 1 11011 108 12 0 chr10 60241911 60243460 -85345828 - THE1B-int LTR MaLR -6 1574 8 1853 169 31 28 chr10 60243460 60243820 -85345468 - THE1B LTR MaLR -3 361 1 284 246 27 36 chr10 60243868 60243978 -85345310 + CT-rich Low_complexity Low_complexity 3 111 0 379 297 143 0 chr10 60244045 60244220 -85345068 + MIR SINE MIR 63 262 0 209 310 53 26 chr10 60244293 60244406 -85344882 - L2 LINE L2 -40 3273 3158 589 304 90 37 chr10 60244810 60245109 -85344179 + LTR16C LTR ERVL 168 482 -9 842 265 26 8 chr10 60245219 60245453 -85343835 - MIR SINE MIR -13 249 12 218 179 0 0 chr10 60245477 60245516 -85343772 + (CAT)n Simple_repeat Simple_repeat 2 40 0 223 352 76 19 chr10 60245916 60246021 -85343267 + L2 LINE L2 2986 3096 -176 22 0 0 0 chr10 60247259 60247281 -85342007 + AT_rich Low_complexity Low_complexity 1 22 0 2232 154 70 24 chr10 60248997 60249412 -85339876 + Tigger2a DNA MER2_type 1 434 0 319 277 109 47 chr10 60249610 60249919 -85339369 - MLT1J1 LTR MaLR 0 446 73 360 0 0 0 chr10 60250172 60250212 -85339076 + (TG)n Simple_repeat Simple_repeat 1 40 0 195 42 0 0 chr10 60250272 60250296 -85338992 + (CTAAG)n Simple_repeat Simple_repeat 2 25 0 1493 212 44 25 chr10 60250439 60250804 -85338484 - MLT1A2 LTR MaLR -2 465 1 21 57 0 0 chr10 60251121 60251156 -85338132 + AT_rich Low_complexity Low_complexity 1 35 0 577 273 52 22 chr10 60252531 60252762 -85336526 + L1MEc LINE L1 35 272 -6124 3768 110 214 22 chr10 60253049 60253742 -85335546 - LTR12 LTR ERV1 0 826 1 1890 148 70 12 chr10 60254171 60254501 -85334787 + MER61C LTR ERV1 86 434 0 709 330 24 114 chr10 60254963 60255679 -85333609 - L2 LINE L2 -661 2653 2003 232 328 86 31 chr10 60256271 60256399 -85332889 + MIR SINE MIR 16 150 -58 424 167 0 0 chr10 60257831 60257915 -85331373 + L1MA4 LINE L1 6211 6294 -6 1277 155 184 16 chr10 60258495 60258804 -85330484 - MER46B DNA MER2_type 0 236 1 682 217 37 0 chr10 60259566 60259727 -85329561 - L1MC4 LINE L1 -507 7535 7369 1276 248 159 31 chr10 60259816 60260163 -85329125 - L1MC4 LINE L1 -957 7085 6784 504 0 0 0 chr10 60260163 60260219 -85329069 + (TATAA)n Simple_repeat Simple_repeat 4 59 0 1276 248 159 31 chr10 60260219 60260424 -85328864 - L1MC4 LINE L1 -1258 6784 6462 513 180 60 10 chr10 60261383 60261483 -85327805 + Tigger3b DNA MER2_type 1 105 -1126 * 5056 149 55 10 chr10 60261475 60262413 -85326875 + Tigger3b DNA MER2_type 250 1230 -1 363 318 114 5 chr10 60262759 60262960 -85326328 + MIR SINE MIR 40 262 0 1832 91 0 0 chr10 60263176 60263439 -85325849 - pTR5 LTR ERV1 -2046 392 130 233 287 11 11 chr10 60263666 60263753 -85325535 - L1MCa LINE L1 -4922 1504 1418 219 146 48 39 chr10 60263853 60263956 -85325332 + (TA)n Simple_repeat Simple_repeat 2 105 0 1724 270 63 19 chr10 60264096 60264970 -85324318 - L1MC4 LINE L1 -146 7896 6838 199 327 47 19 chr10 60265110 60265217 -85324071 - MIR SINE MIR -105 157 48 24 32 0 0 chr10 60265763 60265794 -85323494 + AT_rich Low_complexity Low_complexity 1 31 0 219 344 44 81 chr10 60266844 60267004 -85322284 - L2 LINE L2 0 3272 3119 1473 256 4 18 chr10 60267832 60268208 -85321080 - MLT1A2 LTR MaLR 0 467 4 207 268 18 0 chr10 60268667 60268723 -85320565 + (TG)n Simple_repeat Simple_repeat 2 58 0 816 174 0 0 chr10 60270237 60270369 -85318919 + LTR1 LTR ERV1 652 783 -2 3081 148 18 27 chr10 60270370 60270932 -85318356 + L1PA16 LINE L1 5610 6166 0 814 303 55 31 chr10 60270972 60271262 -85318026 + L1M4 LINE L1 282 578 -5964 2202 213 36 51 chr10 60271263 60271823 -85317465 + LTR27 LTR ERV1 1 1273 -141 432 210 76 51 chr10 60271817 60271974 -85317314 + LTR27 LTR ERV1 476 636 0 * 2324 243 54 13 chr10 60272038 60272710 -85316578 + L1M4 LINE L1 621 1319 -5223 319 274 19 0 chr10 60272716 60272822 -85316466 + L1M4 LINE L1 1606 1713 -4933 2320 150 54 5 chr10 60272823 60273286 -85316002 - MER4B LTR ERV1 0 779 132 2170 199 36 9 chr10 60273286 60273733 -85315555 - LOR1b LTR ERV1 0 461 3 570 165 0 0 chr10 60273735 60273826 -85315462 - LOR1b-int LTR ERV1 0 8120 8030 * 1625 144 0 4 chr10 60273825 60274082 -85315206 - LOR1b-int LTR ERV1 -2056 6064 5809 * 27513 127 53 33 chr10 60274076 60276909 -85312379 - LOR1b-int LTR ERV1 -2592 5528 2756 246 62 0 0 chr10 60276909 60276941 -85312347 + (TA)n Simple_repeat Simple_repeat 1 32 0 27513 127 53 33 chr10 60276941 60278182 -85311106 - LOR1b-int LTR ERV1 -5364 2756 1542 1914 141 3 3 chr10 60278182 60278473 -85310815 - AluSx SINE Alu -21 291 1 27513 127 53 33 chr10 60278473 60279005 -85310283 - LOR1b-int LTR ERV1 -6578 1542 1023 243 0 0 0 chr10 60279005 60279032 -85310256 + (CA)n Simple_repeat Simple_repeat 2 28 0 27513 127 53 33 chr10 60279032 60279637 -85309651 - LOR1b-int LTR ERV1 -7097 1023 206 1827 187 42 6 chr10 60279649 60280007 -85309281 - LOR1b-int LTR ERV1 -7749 371 1 2076 197 29 18 chr10 60280007 60280463 -85308825 - LOR1b LTR ERV1 0 461 1 538 150 18 35 chr10 60280464 60280577 -85308711 - MER4B LTR ERV1 -476 134 24 1278 280 70 52 chr10 60280589 60281647 -85307641 + L1M4 LINE L1 1865 2941 -3884 988 323 36 22 chr10 60281707 60282261 -85307027 - L1PBa LINE L1 -6299 564 3 1040 235 56 0 chr10 60282270 60282572 -85306716 + L1M4 LINE L1 2884 3202 -3442 * 3042 229 45 11 chr10 60282568 60283671 -85305617 + L1M4 LINE L1 4832 5974 -702 21 36 0 0 chr10 60283698 60283726 -85305562 + AT_rich Low_complexity Low_complexity 1 28 0 508 173 43 7 chr10 60284375 60284514 -85304774 + L1MA7 LINE L1 6129 6272 -19 331 305 96 60 chr10 60284854 60285103 -85304185 - MIR SINE MIR -1 261 4 311 232 0 11 chr10 60285783 60285878 -85303410 - L1MC4 LINE L1 -1339 6703 6610 189 318 85 0 chr10 60285972 60286101 -85303187 - MIR SINE MIR -30 232 93 563 308 19 28 chr10 60286250 60286461 -85302827 - MIR SINE MIR 0 262 54 287 295 23 129 chr10 60286861 60287078 -85302210 - L2 LINE L2 -1756 1558 1365 299 386 33 43 chr10 60287407 60287591 -85301697 + L2 LINE L2 3081 3262 -10 336 276 224 9 chr10 60287752 60287868 -85301420 - MER5A DNA MER1_type -21 168 28 7046 48 20 0 chr10 60288105 60289061 -85300227 - L1PA5 LINE L1 0 6154 5205 422 342 82 39 chr10 60289721 60289978 -85299310 - L2 LINE L2 -1 3271 3004 287 377 93 28 chr10 60290412 60290701 -85298587 + L3 LINE CR1 1149 1456 -121 1786 204 61 40 chr10 60291133 60291628 -85297660 - MLT1D LTR MaLR 0 505 1 349 229 0 0 chr10 60291649 60291710 -85297578 - Tigger5 DNA MER2_type -2261 62 2 22 0 0 0 chr10 60291846 60291868 -85297420 + AT_rich Low_complexity Low_complexity 1 22 0 363 181 0 0 chr10 60292948 60293020 -85296268 + CT-rich Low_complexity Low_complexity 1 72 0 2078 105 31 0 chr10 60293025 60293319 -85295969 - AluSc SINE Alu -2 307 5 1723 156 135 18 chr10 60293463 60293790 -85295498 - MER47A DNA MER2_type 0 366 2 245 300 90 0 chr10 60296790 60296890 -85292398 - HAL1 LINE L1 -794 1713 1605 308 146 0 0 chr10 60296924 60296979 -85292309 + L1MA2 LINE L1 6246 6300 -4 21 71 0 0 chr10 60296981 60297023 -85292265 + AT_rich Low_complexity Low_complexity 1 42 0 2122 115 10 0 chr10 60297265 60297570 -85291718 - AluY SINE Alu -3 308 1 346 271 58 102 chr10 60297628 60297923 -85291365 - HAL1 LINE L1 -1345 1162 881 330 287 0 11 chr10 60298850 60298944 -85290344 - L2 LINE L2 0 3313 3221 275 343 91 25 chr10 60299429 60299671 -85289617 + MIR SINE MIR 3 260 -2 807 332 65 12 chr10 60300193 60300518 -85288770 - MLT1I LTR MaLR 0 409 68 210 297 0 40 chr10 60300600 60300674 -85288614 - MIR SINE MIR -54 208 138 8759 194 68 49 chr10 60300695 60302743 -85286545 + L1M3 LINE L1 7 2014 -4370 2263 97 3 0 chr10 60302743 60303042 -85286246 + AluY SINE Alu 1 300 -11 8759 194 68 49 chr10 60303042 60303283 -85286005 + L1M3 LINE L1 2014 2249 -4135 1764 188 51 10 chr10 60303283 60303676 -85285612 - L1MA5 LINE L1 0 6300 5892 8759 194 68 49 chr10 60303676 60303734 -85285554 + L1M3 LINE L1 2249 2304 -4080 1988 211 44 0 chr10 60303734 60304142 -85285146 + MSTB LTR MaLR 1 426 0 8759 194 68 49 chr10 60304142 60304234 -85285054 + L1M3 LINE L1 2304 2495 -3889 1329 183 25 19 chr10 60304227 60304677 -85284611 + L1M3 LINE L1 5318 5773 -646 * 516 243 27 0 chr10 60304748 60304859 -85284429 + Ricksha DNA DNA 2 115 -1066 1063 171 20 5 chr10 60304875 60305074 -85284214 + Ricksha DNA DNA 241 442 -2804 * 4359 157 17 17 chr10 60305057 60305890 -85283398 + Ricksha DNA DNA 2357 3189 -57 22 35 0 0 chr10 60306557 60306586 -85282702 + AT_rich Low_complexity Low_complexity 1 29 0 1661 190 3 0 chr10 60307437 60307763 -85281525 - L1MA4 LINE L1 -7 6293 5967 87 52 0 0 chr10 60308068 60308204 -85281084 + AT_rich Low_complexity Low_complexity 1 136 0 500 300 88 6 chr10 60308747 60308917 -85280371 - MIR SINE MIR -26 236 53 354 297 20 29 chr10 60308897 60309036 -85280252 + MIR SINE MIR 10 147 -61 * 2241 47 61 0 chr10 60309510 60309788 -85279500 - AluY SINE Alu -16 295 1 649 188 49 0 chr10 60310226 60310370 -85278918 - HSMAR2 DNA Mariner -2 1300 1150 254 111 0 0 chr10 60310384 60310420 -85278868 + AluSc SINE Alu 37 72 -227 1463 23 0 0 chr10 60310420 60310593 -85278695 + L1PA2 LINE L1 5982 6154 -1 1738 88 4 0 chr10 60310593 60310819 -85278469 + AluSc SINE Alu 71 297 -12 6629 155 10 22 chr10 60310819 60311988 -85277300 - HSMAR2 DNA Mariner -145 1157 3 183 286 0 0 chr10 60312084 60312119 -85277169 + MER5A DNA MER1_type 152 186 -3 26 0 0 0 chr10 60312255 60312281 -85277007 + AT_rich Low_complexity Low_complexity 1 26 0 3208 186 89 40 chr10 60312294 60313050 -85276238 - MER54B LTR ERVL 0 793 1 387 270 90 0 chr10 60313068 60313179 -85276109 - MIR SINE MIR -70 192 72 189 426 17 0 chr10 60313282 60313397 -85275891 + MIR SINE MIR 19 135 -73 292 309 110 0 chr10 60313424 60313586 -85275702 - MLT1J2 LTR MaLR 0 446 268 424 229 9 19 chr10 60313678 60313783 -85275505 - MLT1J2 LTR MaLR -317 133 30 22 35 0 0 chr10 60314229 60314258 -85275030 + AT_rich Low_complexity Low_complexity 1 29 0 8632 199 66 7 chr10 60315476 60317303 -85271985 - L1M2c LINE L1 -4855 2711 6 204 159 23 0 chr10 60317718 60317762 -85271526 + A-rich Low_complexity Low_complexity 3 47 0 5014 176 59 6 chr10 60317791 60318817 -85270471 - L1MA3 LINE L1 0 6305 5227 23 68 0 0 chr10 60319491 60319535 -85269753 + AT_rich Low_complexity Low_complexity 1 44 0 26 30 0 0 chr10 60320016 60320049 -85269239 + AT_rich Low_complexity Low_complexity 1 33 0 1718 189 82 39 chr10 60320079 60320517 -85268771 - MER31B LTR ERV1 -9 457 1 877 92 0 8 chr10 60321118 60321249 -85268039 - L1PA7 LINE L1 0 6154 6025 929 276 93 46 chr10 60321259 60321799 -85267489 - L1ME3 LINE L1 -2 6160 5596 502 79 59 10 chr10 60321811 60321912 -85267376 + CT-rich Low_complexity Low_complexity 5 110 0 239 261 96 75 chr10 60321912 60322192 -85267096 - L1ME3 LINE L1 -1958 4188 3903 216 0 0 0 chr10 60322242 60322266 -85267022 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 3377 27 2 0 chr10 60322270 60322673 -85266615 - L1PA3 LINE L1 -8 6147 5744 4167 27 0 0 chr10 60322673 60323197 -85266091 + L1P LINE L1 2982 3505 -2641 605 311 72 35 chr10 60323193 60324328 -85264960 - L1ME3 LINE L1 -2290 3856 2680 * 277 272 37 37 chr10 60324587 60324724 -85264564 + L1MCa LINE L1 299 421 -6002 302 341 62 28 chr10 60326100 60326279 -85263009 - MIR SINE MIR -73 189 5 3320 65 5 13 chr10 60326532 60327006 -85262282 - L1PA7 LINE L1 0 6154 5708 3840 77 8 0 chr10 60327006 60327527 -85261761 - L1P3 LINE L1 -4840 1621 1097 363 298 16 0 chr10 60327838 60327959 -85261329 + L1MC5 LINE L1 7315 7437 -524 339 307 20 0 chr10 60328333 60328434 -85260854 + L2 LINE L2 3205 3307 -6 277 215 15 0 chr10 60328584 60328649 -85260639 - MLT1H LTR MaLR -3 546 481 361 316 154 14 chr10 60328670 60328955 -85260333 - L1MC4 LINE L1 -273 7769 7445 3807 155 8 9 chr10 60329500 60330134 -85259154 - MER50 LTR ERV1 -23 711 79 322 128 23 93 chr10 60330175 60330261 -85259027 - MER50 LTR ERV1 -648 86 7 245 197 84 0 chr10 60331478 60331546 -85257742 - MIR SINE MIR -90 118 40 1721 64 17 30 chr10 60332268 60332504 -85256784 - AluY SINE Alu -12 299 67 22 0 0 0 chr10 60333209 60333231 -85256057 + AT_rich Low_complexity Low_complexity 1 22 0 369 342 14 14 chr10 60334653 60334846 -85254442 + MIR3 SINE MIR 3 197 -11 399 253 6 121 chr10 60336360 60336542 -85252746 + MIR SINE MIR 53 213 -49 21 0 0 0 chr10 60336804 60336825 -85252463 + AT_rich Low_complexity Low_complexity 1 21 0 282 56 0 0 chr10 60337114 60337150 -85252138 + (TG)n Simple_repeat Simple_repeat 1 36 0 2271 110 0 0 chr10 60337296 60337597 -85251691 - AluSq SINE Alu -12 301 1 372 363 44 12 chr10 60337748 60337908 -85251380 + L2 LINE L2 2864 3028 -285 25 31 0 0 chr10 60338978 60339010 -85250278 + AT_rich Low_complexity Low_complexity 1 32 0 24 0 0 0 chr10 60339198 60339222 -85250066 + AT_rich Low_complexity Low_complexity 1 24 0 396 351 69 37 chr10 60340020 60340370 -85248918 - L3 LINE CR1 -189 1388 1028 324 359 45 14 chr10 60340744 60340967 -85248321 + L2 LINE L2 2306 2535 -779 6540 168 37 16 chr10 60341236 60342511 -85246777 + HSMAR2 DNA Mariner 2 1302 0 638 270 5 24 chr10 60342876 60343072 -85246216 + MLT1G1 LTR MaLR 245 367 -175 278 338 0 0 chr10 60343292 60343366 -85245922 + L2 LINE L2 3230 3303 -10 2510 95 25 5 chr10 60343875 60344243 -85245045 - THE1C LTR MaLR 0 375 1 375 23 0 0 chr10 60344434 60344478 -85244810 + (TG)n Simple_repeat Simple_repeat 2 45 0 520 305 94 52 chr10 60345144 60345423 -85243865 - L1MEc LINE L1 -1846 4536 4270 1772 166 0 7 chr10 60345423 60345741 -85243547 - AluSx SINE Alu 0 316 1 520 305 94 52 chr10 60345741 60347325 -85241963 - L1MEc LINE L1 -2112 4270 2594 280 252 115 12 chr10 60347456 60347640 -85241648 - L1MEc LINE L1 -3834 2548 2374 376 329 112 40 chr10 60348001 60348348 -85240940 - L1MEc LINE L1 -4748 1636 1265 280 251 1 37 chr10 60348363 60348450 -85240838 - MER58 DNA MER1_type -2 2418 128 2162 132 27 21 chr10 60349473 60349845 -85239443 + THE1C LTR MaLR 1 374 -1 330 26 0 0 chr10 60351204 60351243 -85238045 + (TG)n Simple_repeat Simple_repeat 2 40 0 1062 154 72 0 chr10 60351250 60351377 -85237911 - L1MA7 LINE L1 -1 6290 6174 303 28 0 0 chr10 60351377 60351413 -85237875 + (TG)n Simple_repeat Simple_repeat 1 36 0 1062 154 72 0 chr10 60351413 60351506 -85237782 - L1MA7 LINE L1 -117 6174 6054 29 60 0 0 chr10 60351790 60351840 -85237448 + AT_rich Low_complexity Low_complexity 1 50 0 36 82 0 0 chr10 60352052 60352137 -85237151 + AT_rich Low_complexity Low_complexity 1 85 0 459 304 30 61 chr10 60353633 60353929 -85235359 - L1MEc LINE L1 -5831 541 255 27 62 0 0 chr10 60354924 60354972 -85234316 + AT_rich Low_complexity Low_complexity 1 48 0 2166 128 10 0 chr10 60355258 60355562 -85233726 + AluSx SINE Alu 1 307 -5 584 270 8 124 chr10 60356232 60356491 -85232797 - MIR SINE MIR -6 256 28 310 282 128 19 chr10 60356716 60356872 -85232416 - L2 LINE L2 -141 3172 3000 190 388 0 0 chr10 60356900 60356980 -85232308 - L2 LINE L2 -4 3309 3230 571 270 39 6 chr10 60358136 60358314 -85230974 + Tigger1 DNA MER2_type 1 184 -2234 * 4545 174 16 0 chr10 60358292 60359083 -85230205 + Tigger1 DNA MER2_type 1429 2232 -186 945 183 24 0 chr10 60359107 60359276 -85230012 - L1PB4 LINE L1 -14 6844 6672 1254 131 0 0 chr10 60359276 60359452 -85229836 - AluSg/x SINE Alu -12 300 125 12093 238 30 19 chr10 60359452 60359663 -85229625 - L1PB4 LINE L1 -517 6488 6281 207 0 0 0 chr10 60359663 60359686 -85229602 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1955 119 0 0 chr10 60359692 60359952 -85229336 - AluSx SINE Alu -21 291 32 12093 238 30 19 chr10 60359952 60360037 -85229251 - L1PB4 LINE L1 -728 6277 6194 201 39 0 0 chr10 60360037 60360063 -85229225 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 12093 238 30 19 chr10 60360063 60364283 -85225005 - L1PB4 LINE L1 -811 6194 1869 261 0 0 0 chr10 60364283 60364312 -85224976 + (TA)n Simple_repeat Simple_repeat 1 29 0 12093 238 30 19 chr10 60364312 60364710 -85224578 - L1PB4 LINE L1 -5136 1869 1477 836 286 15 8 chr10 60364718 60364977 -85224311 - L1PA15-16 LINE L1 -3930 2919 2659 4742 68 21 5 chr10 60365529 60366543 -85222745 - MER11A LTR ERVK 0 1266 1 267 344 94 33 chr10 60366818 60367062 -85222226 - L1PB4 LINE L1 -5893 956 698 1627 230 45 108 chr10 60367129 60367222 -85222066 - LTR9 LTR ERV1 -13 599 502 1902 119 30 10 chr10 60367222 60367524 -85221764 + AluSq SINE Alu 1 308 -5 1627 230 45 108 chr10 60367524 60367936 -85221352 - LTR9 LTR ERV1 -110 502 140 2491 74 0 3 chr10 60367936 60368246 -85221042 - AluSg SINE Alu -1 309 1 1627 230 45 108 chr10 60368246 60368378 -85220910 - LTR9 LTR ERV1 -472 140 1 785 305 81 48 chr10 60368399 60368881 -85220407 - L1PB4 LINE L1 -6350 499 2 1852 82 12 0 chr10 60369062 60369319 -85219969 + L1PA8 LINE L1 5912 6171 -1 272 288 110 42 chr10 60369337 60369528 -85219760 - MLT1H LTR MaLR -250 299 96 200 350 62 12 chr10 60369566 60369726 -85219562 + MIR SINE MIR 93 260 -2 1518 204 53 35 chr10 60369728 60370159 -85219129 - LTR47B LTR ERVL -2 441 3 189 0 0 0 chr10 60370467 60370488 -85218800 + (TA)n Simple_repeat Simple_repeat 2 22 0 3151 42 0 0 chr10 60370488 60370870 -85218418 - L1PA5 LINE L1 -15 6139 5758 21 0 0 0 chr10 60371314 60371335 -85217953 + AT_rich Low_complexity Low_complexity 1 21 0 779 203 87 98 chr10 60372120 60372396 -85216892 - MLT1A1 LTR MaLR -92 273 1 307 152 65 120 chr10 60372396 60372486 -85216802 + MLT2C2 LTR ERVL 380 464 0 822 307 37 40 chr10 60373254 60373580 -85215708 - MLT1I LTR MaLR 0 409 85 1388 231 3 7 chr10 60373992 60374291 -85214997 - AluJb SINE Alu -14 298 1 407 299 91 13 chr10 60375285 60375439 -85213849 + MIR SINE MIR 70 235 -27 813 281 95 56 chr10 60375602 60376033 -85213255 + LTR16A1 LTR ERVL 3 450 -7 197 296 56 0 chr10 60376125 60376179 -85213109 + L2 LINE L2 3212 3268 -4 188 269 0 45 chr10 60376680 60376747 -85212541 - MIR SINE MIR -51 211 148 32 43 0 0 chr10 60377471 60377517 -85211771 + AT_rich Low_complexity Low_complexity 1 46 0 391 287 10 0 chr10 60378872 60378973 -85210315 + MIR SINE MIR 150 251 -11 2909 96 38 22 chr10 60379462 60379908 -85209380 + MLT2A2 LTR ERVL 1 453 0 1628 56 0 0 chr10 60380507 60380704 -85208584 - AluY SINE Alu -9 302 106 408 291 26 7 chr10 60380900 60381051 -85208237 + MLT2E LTR ERVL 472 625 -3 251 279 12 23 chr10 60381056 60381142 -85208146 + MLT1-int LTR MaLR 8 92 -1279 507 253 64 30 chr10 60381239 60381504 -85207784 + L1M4 LINE L1 2140 2413 -3733 998 232 54 48 chr10 60381504 60382008 -85207280 - L1M4 LINE L1 -3265 2881 2375 865 284 53 46 chr10 60382069 60383310 -85205978 + L1M4 LINE L1 3947 5267 -879 6096 208 28 50 chr10 60383598 60385164 -85204124 - Tigger5 DNA MER2_type -180 2143 613 2054 215 22 11 chr10 60386309 60386769 -85202519 - L1MA10 LINE L1 -1234 4912 4448 1168 244 26 11 chr10 60386766 60387147 -85202141 + L1MA10 LINE L1 4936 5322 -824 * 1772 189 20 56 chr10 60387151 60387595 -85201693 + L1MA6 LINE L1 5873 6300 0 2803 172 23 91 chr10 60387596 60388321 -85200967 + L1MA10 LINE L1 5315 5990 -301 245 228 0 18 chr10 60388313 60388370 -85200918 - L1MC4 LINE L1 -1329 6713 6658 * 253 115 16 16 chr10 60388415 60388476 -85200812 + (TA)n Simple_repeat Simple_repeat 2 62 0 1237 171 16 82 chr10 60388478 60388782 -85200506 + L1MA10 LINE L1 6040 6323 -11 22 80 0 0 chr10 60389605 60389655 -85199633 + AT_rich Low_complexity Low_complexity 1 50 0 183 80 0 0 chr10 60390077 60390102 -85199186 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 22 0 0 0 chr10 60390178 60390200 -85199088 + AT_rich Low_complexity Low_complexity 1 22 0 2021 119 0 0 chr10 60390293 60390571 -85198717 + AluSx SINE Alu 5 282 -30 229 25 0 50 chr10 60390573 60390613 -85198675 + (TTAAA)n Simple_repeat Simple_repeat 3 40 0 232 343 19 37 chr10 60391274 60391382 -85197906 - MIR SINE MIR -84 124 19 443 307 108 30 chr10 60391403 60391634 -85197654 + MIR SINE MIR 14 262 0 443 281 58 115 chr10 60391848 60392264 -85197024 - MLT1J2 LTR MaLR -39 411 20 222 295 194 23 chr10 60392351 60392480 -85196808 - MIR SINE MIR -74 188 38 618 287 82 56 chr10 60392494 60392835 -85196453 + LTR16A1 LTR ERVL 43 392 -65 1330 209 111 67 chr10 60392911 60393390 -85195898 - MLT1D LTR MaLR -5 500 1 385 289 0 0 chr10 60393453 60393529 -85195759 + HERV16 LTR ERVL 57 132 -4864 1541 210 95 16 chr10 60394005 60394372 -85194916 - MSTD LTR MaLR 0 396 1 203 239 22 0 chr10 60394699 60394745 -85194543 - L2 LINE L2 0 3272 3226 557 244 95 12 chr10 60395045 60395213 -85194075 - MER101 LTR ERV1 -57 417 236 195 42 0 0 chr10 60395276 60395300 -85193988 + (TG)n Simple_repeat Simple_repeat 1 24 0 2168 206 14 5 chr10 60495342 60495760 -85093528 + MER50 LTR ERV1 313 734 0 378 153 8 20 chr10 60496561 60496640 -85092648 - L1PA14 LINE L1 -292 5864 5789 3230 194 45 48 chr10 60496640 60497477 -85091811 - L1PA14 LINE L1 -807 5339 4505 703 236 43 39 chr10 60497825 60497892 -85091396 + LTR9 LTR ERV1 358 423 -189 1917 124 62 0 chr10 60497892 60498183 -85091105 + AluSx SINE Alu 1 309 -3 703 236 43 39 chr10 60498183 60498369 -85090919 + LTR9 LTR ERV1 423 612 0 1273 162 55 0 chr10 60498369 60498659 -85090629 + L1MA6 LINE L1 4033 4338 -1808 409 273 45 15 chr10 60499320 60499452 -85089836 - MIR3 SINE MIR -1 207 72 2168 103 0 3 chr10 60500006 60500308 -85088980 + AluY SINE Alu 1 301 -10 463 89 13 13 chr10 60500617 60500696 -85088592 + (GGA)n Simple_repeat Simple_repeat 2 80 0 1656 175 33 1 chr10 60500926 60501633 -85087655 + L1MA6 LINE L1 5329 6106 -194 5999 158 43 12 chr10 60501637 60502757 -85086531 + Tigger3b DNA MER2_type 1 1155 -76 933 176 16 5 chr10 60502799 60502986 -85086302 + L1MA6 LINE L1 6112 6300 0 22 35 0 0 chr10 60503239 60503268 -85086020 + AT_rich Low_complexity Low_complexity 1 29 0 40 37 0 0 chr10 60504026 60504080 -85085208 + AT_rich Low_complexity Low_complexity 1 54 0 2620 99 3 0 chr10 60504581 60504935 -85084353 - THE1A LTR MaLR 0 355 1 10581 108 25 9 chr10 60504935 60506490 -85082798 - THE1A-int LTR MaLR 0 1580 1 2451 98 29 3 chr10 60506490 60506836 -85082452 - THE1A LTR MaLR 0 355 1 23 33 0 0 chr10 60506860 60506890 -85082398 + AT_rich Low_complexity Low_complexity 1 30 0 1776 245 39 15 chr10 60508001 60508462 -85080826 - MER70A LTR ERVL 0 472 1 271 216 20 0 chr10 60508539 60508590 -85080698 - MER2 DNA MER2_type -293 52 1 276 30 0 0 chr10 60508679 60508712 -85080576 + (TG)n Simple_repeat Simple_repeat 1 33 0 186 43 0 0 chr10 60508711 60508734 -85080554 + (GA)n Simple_repeat Simple_repeat 1 23 0 * 23 0 0 0 chr10 60508779 60508802 -85080486 + AT_rich Low_complexity Low_complexity 1 23 0 749 212 145 93 chr10 60509431 60509776 -85079512 - MSTD LTR MaLR -2 394 1 21 0 0 0 chr10 60509832 60509853 -85079435 + AT_rich Low_complexity Low_complexity 1 21 0 235 304 0 0 chr10 60510814 60510893 -85078395 - MLT1K LTR MaLR -23 565 487 360 339 18 23 chr10 60511811 60511982 -85077306 - MIR SINE MIR -62 200 31 283 374 90 21 chr10 60511995 60512327 -85076961 - L2 LINE L2 0 3313 2959 390 369 159 0 chr10 60512391 60512643 -85076645 - L2 LINE L2 -518 2796 2505 888 274 42 5 chr10 60513382 60513594 -85075694 - LTR40b LTR ERVL -24 438 219 265 94 57 0 chr10 60513594 60513647 -85075641 - L1ME LINE L1 -333 5833 5778 793 231 16 11 chr10 60513652 60513838 -85075450 - LTR40c LTR ERVL -240 225 39 2095 116 6 31 chr10 60514722 60515041 -85074247 - AluSx SINE Alu -1 311 1 33 0 0 0 chr10 60515272 60515305 -85073983 + AT_rich Low_complexity Low_complexity 1 33 0 2962 210 58 31 chr10 60515305 60516048 -85073240 - L1MD1 LINE L1 -25 6217 5455 2507 65 0 13 chr10 60516128 60516438 -85072850 + AluY SINE Alu 1 306 -5 227 373 82 19 chr10 60516517 60516675 -85072613 - MIR SINE MIR -48 214 47 226 319 113 35 chr10 60516703 60516844 -85072444 - L2 LINE L2 -4 3309 3158 200 211 0 19 chr10 60517033 60517085 -85072203 + A-rich Low_complexity Low_complexity 3 53 0 262 306 33 16 chr10 60518059 60518180 -85071108 + L2 LINE L2 2970 3092 -180 280 327 10 0 chr10 60518688 60518792 -85070496 - MIR SINE MIR -2 260 156 3660 201 35 44 chr10 60518810 60519772 -85069516 - LTR13 LTR ERVK 0 954 1 3708 129 54 87 chr10 60520558 60521370 -85067918 - LTR1 LTR ERV1 0 785 1 2418 110 16 3 chr10 60521642 60522006 -85067282 - L1PB1 LINE L1 0 6151 5783 1186 102 6 0 chr10 60522006 60522182 -85067106 - L1PB1 LINE L1 -618 5533 5357 1147 197 40 18 chr10 60522177 60522451 -85066837 + L1PB1 LINE L1 5069 5348 -798 * 210 241 69 0 chr10 60522834 60522892 -85066396 + MIR SINE MIR 120 181 -81 24 53 0 0 chr10 60523012 60523050 -85066238 + AT_rich Low_complexity Low_complexity 1 38 0 269 204 0 56 chr10 60524062 60524116 -85065172 + L2 LINE L2 3210 3260 -12 27 0 0 0 chr10 60524730 60524757 -85064531 + AT_rich Low_complexity Low_complexity 1 27 0 1992 169 37 48 chr10 60524869 60525306 -85063982 - MSTB1 LTR MaLR 0 432 1 1143 212 63 60 chr10 60525584 60525966 -85063322 + L1ME2 LINE L1 5767 6149 -15 312 247 100 27 chr10 60526305 60526455 -85062833 - Charlie8 DNA MER1_type -2205 212 52 485 212 8 59 chr10 60527131 60527249 -85062039 + L2 LINE L2 3187 3298 -15 2022 118 7 7 chr10 60527277 60527565 -85061723 + AluSx SINE Alu 3 290 -22 213 244 51 64 chr10 60528219 60528297 -85060991 - L2 LINE L2 -18 3295 3219 2105 120 0 7 chr10 60528371 60528670 -85060618 - AluY SINE Alu -14 297 1 607 234 141 16 chr10 60529740 60529996 -85059292 - LTR37B LTR ERV1 -4 464 177 611 294 32 46 chr10 60531088 60531194 -85058094 - L1ME1 LINE L1 -33 6133 6027 2073 121 3 17 chr10 60531194 60531492 -85057796 + AluSx SINE Alu 3 296 -16 611 294 32 46 chr10 60531492 60531667 -85057621 - L1ME1 LINE L1 -139 6027 5856 253 296 111 32 chr10 60531658 60531874 -85057414 - L1MEc LINE L1 -4818 1566 1334 * 886 130 0 8 chr10 60531890 60532013 -85057275 - FLAM_C SINE Alu -21 122 1 1965 276 74 59 chr10 60532017 60532933 -85056355 - L1MEc LINE L1 -5090 1473 532 195 42 0 0 chr10 60532933 60532957 -85056331 + (TC)n Simple_repeat Simple_repeat 2 25 0 1965 276 74 59 chr10 60532957 60533284 -85056004 - L1MEc LINE L1 -6031 532 211 29 0 0 0 chr10 60534093 60534122 -85055166 + AT_rich Low_complexity Low_complexity 1 29 0 230 284 216 0 chr10 60534347 60534435 -85054853 + L2 LINE L2 3158 3264 -8 805 230 69 20 chr10 60534463 60534667 -85054621 - MER20 DNA MER1_type -4 215 2 201 313 30 0 chr10 60535007 60535074 -85054214 - MIR3 SINE MIR -131 77 9 329 349 97 0 chr10 60535129 60535304 -85053984 - MIR SINE MIR 0 262 71 184 320 0 0 chr10 60536362 60536412 -85052876 - L3 LINE CR1 -159 1418 1369 246 62 0 0 chr10 60536881 60536913 -85052375 + (A)n Simple_repeat Simple_repeat 1 32 0 201 100 40 40 chr10 60536916 60536966 -85052322 + T-rich Low_complexity Low_complexity 3 52 0 2521 58 3 3 chr10 60538137 60538447 -85050841 - AluY SINE Alu 0 311 2 208 255 0 0 chr10 60538491 60538538 -85050750 + CT-rich Low_complexity Low_complexity 4 50 0 233 287 93 53 chr10 60539313 60539463 -85049825 + MIR SINE MIR 90 245 -17 4756 251 53 25 chr10 60539977 60541660 -85047628 - L1M4 LINE L1 -990 5156 3426 585 105 8 8 chr10 60541682 60541774 -85047514 + MLT2A1 LTR ERVL 301 394 -59 220 90 60 15 chr10 60541790 60541857 -85047431 + (TA)n Simple_repeat Simple_repeat 2 71 0 313 66 0 131 chr10 60541857 60541918 -85047370 + MLT2A1 LTR ERVL 392 444 0 7885 141 55 9 chr10 60541923 60543217 -85046071 + THE1C-int LTR MaLR 228 1580 0 1613 161 124 15 chr10 60543219 60543549 -85045739 + THE1C LTR MaLR 5 370 -5 3290 151 52 13 chr10 60544245 60544840 -85044448 - LTR29 LTR ERV1 0 622 5 5437 178 72 30 chr10 60545208 60546440 -85042848 - LTR49-int LTR ERV1 -541 5790 4507 29 28 0 0 chr10 60546573 60546609 -85042679 + AT_rich Low_complexity Low_complexity 1 36 0 248 109 0 22 chr10 60548100 60548146 -85041142 + (GGA)n Simple_repeat Simple_repeat 2 46 0 2353 59 0 7 chr10 60548663 60548976 -85040312 - AluY SINE Alu 0 311 1 330 255 132 9 chr10 60549920 60550026 -85039262 - L2 LINE L2 -4 3309 3191 382 303 37 55 chr10 60551728 60551946 -85037342 + MIR SINE MIR 49 262 0 222 118 0 0 chr10 60552112 60552146 -85037142 + (GGA)n Simple_repeat Simple_repeat 3 36 0 912 317 31 31 chr10 60552328 60552684 -85036604 - LTR16B LTR ERVL 0 464 109 209 277 0 0 chr10 60552733 60552780 -85036508 - MIR SINE MIR -177 85 39 2157 104 0 0 chr10 60553198 60553512 -85035776 - AluSc SINE Alu 0 314 1 2288 151 22 61 chr10 60553924 60554368 -85034920 + MSTC LTR MaLR 1 427 -1 10725 184 24 8 chr10 60555419 60557862 -85031426 + L1MA6 LINE L1 3187 5661 -639 2486 215 100 6 chr10 60557864 60558542 -85030746 + L1PBa LINE L1 2313 3055 -3807 2798 182 34 10 chr10 60558549 60559174 -85030114 + L1MA6 LINE L1 5661 6300 0 690 181 7 7 chr10 60559228 60559366 -85029922 + MLT2D LTR ERVL 7 144 -270 228 250 17 17 chr10 60559416 60559476 -85029812 + MLT2D LTR ERVL 266 325 -89 337 327 99 36 chr10 60559647 60559774 -85029514 - MIR SINE MIR -8 254 136 1091 111 0 23 chr10 60559774 60559945 -85029343 + L1PA8 LINE L1 6006 6172 0 337 327 99 36 chr10 60559945 60560040 -85029248 - MIR SINE MIR -126 136 18 500 272 31 6 chr10 60560501 60560663 -85028625 - Charlie8 DNA MER1_type -2165 252 87 224 193 0 70 chr10 60561407 60561464 -85027824 + (CATATA)n Simple_repeat Simple_repeat 5 57 0 2122 116 3 0 chr10 60562349 60562641 -85026647 - AluSq SINE Alu -20 293 1 396 294 35 35 chr10 60563589 60563732 -85025556 - MER5B DNA MER1_type -27 151 9 7706 25 0 0 chr10 60563838 60565020 -85024268 + L1PA3 LINE L1 5006 6187 0 1104 191 26 97 chr10 60565043 60565394 -85023894 + L1MB8 LINE L1 5853 6178 0 1376 166 201 62 chr10 60566159 60566533 -85022755 + MER67D LTR ERV1 89 514 0 766 180 12 56 chr10 60567266 60567427 -85021861 + AluJo SINE Alu 91 244 -68 1625 222 9 17 chr10 60567432 60567834 -85021454 - MER65C LTR ERV1 -51 519 1 514 291 121 42 chr10 60568354 60568619 -85020669 - L2 LINE L2 -2 3270 2985 321 288 45 0 chr10 60569171 60569282 -85020006 - MIR SINE MIR -59 203 88 216 0 0 0 chr10 60570041 60570065 -85019223 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 252 331 62 8 chr10 60570611 60570741 -85018547 + MIR SINE MIR 125 261 -1 664 336 40 45 chr10 60571322 60571718 -85017570 - MLT1K LTR MaLR -95 493 100 868 306 87 53 chr10 60571801 60572271 -85017017 - MLT1J LTR MaLR -10 501 16 1418 178 4 47 chr10 60572696 60572971 -85016317 + AluJo SINE Alu 1 263 -49 231 114 0 0 chr10 60573080 60573115 -85016173 + (T)n Simple_repeat Simple_repeat 1 35 0 877 233 18 14 chr10 60573115 60573338 -85015950 - MER58B DNA MER1_type -15 326 103 1084 179 51 107 chr10 60573486 60573860 -85015428 + MLT1A1 LTR MaLR 1 383 -13 1313 145 98 62 chr10 60573884 60574160 -85015128 + LTR18B LTR ERVL 322 607 -7 1353 239 11 3 chr10 60574200 60574485 -85014803 + HERVL18 LTR ERVL 4 290 -5757 1261 215 27 8 chr10 60574486 60574746 -85014542 + HERVL18 LTR ERVL 492 756 -5291 1144 201 3 15 chr10 60574730 60575100 -85014188 + HERVL18 LTR ERVL 1382 1810 -4237 * 1170 173 55 2 chr10 60575099 60575354 -85013934 + HERVL18 LTR ERVL 2119 2449 -3598 * 1362 192 7 33 chr10 60575352 60575623 -85013665 + HERVL18 LTR ERVL 2717 2980 -3067 817 196 8 0 chr10 60575653 60575786 -85013502 + HERVL18 LTR ERVL 2955 3088 -2959 * 2988 173 14 34 chr10 60575782 60576290 -85012998 + HERVL18 LTR ERVL 2952 3449 -2598 2410 152 111 76 chr10 60576480 60577073 -85012215 + LTR18B LTR ERVL 1 614 0 1719 158 59 9 chr10 60578063 60578386 -85010902 - MER61A LTR ERV1 0 343 5 3841 176 8 33 chr10 60578550 60579128 -85010160 + MER50 LTR ERV1 1 559 -175 4870 133 18 7 chr10 60579128 60579898 -85009390 - MER4E LTR ERV1 0 779 1 3841 176 8 33 chr10 60579898 60580048 -85009240 + MER50 LTR ERV1 559 711 -23 1264 174 50 34 chr10 60580314 60580612 -85008676 - L1MC3 LINE L1 0 7785 7483 378 330 20 25 chr10 60580615 60580815 -85008473 + PABL_B LTR ERV1 1 199 -468 2241 124 0 0 chr10 60580818 60581124 -85008164 + AluSq SINE Alu 1 306 -7 1132 188 55 52 chr10 60581159 60581467 -85007821 + PABL_B LTR ERV1 359 667 0 1061 191 95 46 chr10 60581469 60581731 -85007557 - L1MC3 LINE L1 -304 7481 7207 1281 218 68 18 chr10 60581808 60582134 -85007154 - LTR52 LTR ERVL -79 342 1 1780 182 44 77 chr10 60582134 60582629 -85006659 - L1MC3 LINE L1 -589 7196 6718 35 41 0 0 chr10 60583481 60583530 -85005758 + AT_rich Low_complexity Low_complexity 1 49 0 572 198 43 25 chr10 60583548 60583710 -85005578 - Looper DNA T2_type -1393 165 1 257 187 9 112 chr10 60584174 60584281 -85005007 + L1MA2 LINE L1 5850 5945 -357 452 292 92 5 chr10 60584289 60584529 -85004759 + L1MA9 LINE L1 6039 6289 -2 345 203 251 12 chr10 60585078 60585241 -85004047 + MER5C DNA MER1_type 117 318 -6 529 282 32 83 chr10 60585296 60585573 -85003715 + MLT1E LTR MaLR 1 263 -330 25 102 0 0 chr10 60586473 60586561 -85002727 + AT_rich Low_complexity Low_complexity 1 88 0 1467 244 18 10 chr10 60587093 60587479 -85001809 - L1MC4 LINE L1 -906 7136 6748 184 234 102 114 chr10 60587507 60587674 -85001614 + L2 LINE L2 2590 2754 -560 256 143 36 0 chr10 60587693 60587749 -85001539 + GA-rich Low_complexity Low_complexity 4 61 0 694 240 18 80 chr10 60587767 60588042 -85001246 + L1MA10 LINE L1 6049 6306 -28 668 191 23 6 chr10 60588058 60588231 -85001057 + GA-rich Low_complexity Low_complexity 1 176 0 403 288 44 29 chr10 60588249 60588454 -85000834 + L2 LINE L2 2804 3011 -302 221 196 65 0 chr10 60589004 60589050 -85000238 - L2 LINE L2 0 3272 3224 21 0 0 0 chr10 60590311 60590332 -84998956 + AT_rich Low_complexity Low_complexity 1 21 0 226 333 53 0 chr10 60590339 60590414 -84998874 - L2 LINE L2 -39 3233 3155 313 302 8 47 chr10 60591293 60591422 -84997866 + MIR SINE MIR 125 248 -14 180 257 54 54 chr10 60591432 60591506 -84997782 + MIR SINE MIR 188 261 -1 374 316 65 52 chr10 60591850 60592081 -84997207 - MIR SINE MIR -11 251 18 23 0 0 0 chr10 60592318 60592341 -84996947 + AT_rich Low_complexity Low_complexity 1 23 0 2167 171 39 12 chr10 60594425 60594840 -84994448 + MSTB LTR MaLR 1 426 0 7615 197 29 45 chr10 60594840 60596517 -84992771 + MSTB-int LTR MaLR 1 1651 0 2236 187 24 5 chr10 60596517 60596935 -84992353 + MSTB LTR MaLR 1 426 0 1573 111 0 9 chr10 60597680 60597897 -84991391 + AluSc SINE Alu 83 297 -12 24 32 0 0 chr10 60598037 60598068 -84991220 + AT_rich Low_complexity Low_complexity 1 31 0 210 158 0 88 chr10 60598111 60598168 -84991120 + (CATATA)n Simple_repeat Simple_repeat 6 57 0 2520 126 0 6 chr10 60598614 60598980 -84990308 - THE1B LTR MaLR 0 364 1 183 313 75 25 chr10 60599012 60599092 -84990196 + L2 LINE L2 3187 3270 -2 23 33 0 0 chr10 60599354 60599384 -84989904 + AT_rich Low_complexity Low_complexity 1 30 0 646 322 39 0 chr10 60600080 60600285 -84989003 - MIR SINE MIR -48 214 2 2128 125 0 0 chr10 60600306 60600594 -84988694 + AluSx SINE Alu 1 288 -24 27 0 0 0 chr10 60600594 60600621 -84988667 + AT_rich Low_complexity Low_complexity 1 27 0 5446 142 12 8 chr10 60600761 60601755 -84987533 - L1PB3 LINE L1 0 6154 5156 433 203 0 0 chr10 60601981 60602055 -84987233 - AluJ/FLAM SINE Alu -228 74 1 228 337 0 0 chr10 60602083 60602175 -84987113 + L1ME LINE L1 4562 4653 -1493 302 296 9 19 chr10 60602328 60602436 -84986852 - L1MC4 LINE L1 -1321 6721 6615 244 111 69 0 chr10 60602441 60602513 -84986775 + (TA)n Simple_repeat Simple_repeat 2 78 0 277 233 160 114 chr10 60602644 60602906 -84986382 + MLT1I LTR MaLR 63 336 -73 22 0 0 0 chr10 60602951 60602973 -84986315 + AT_rich Low_complexity Low_complexity 1 22 0 197 83 28 0 chr10 60603050 60603086 -84986202 + (CA)n Simple_repeat Simple_repeat 2 38 0 465 316 84 56 chr10 60603102 60603201 -84986087 + L1ME LINE L1 5295 5390 -772 2139 122 3 3 chr10 60603201 60603512 -84985776 + AluSq SINE Alu 1 311 -2 465 316 84 56 chr10 60603512 60603839 -84985449 + L1ME LINE L1 5390 5733 -429 732 264 105 69 chr10 60603839 60604539 -84984749 + L2 LINE L2 2445 3267 -46 2841 185 30 7 chr10 60604539 60605129 -84984159 + MER6A DNA MER2_type 2 605 0 732 264 105 69 chr10 60605129 60605177 -84984111 + L2 LINE L2 3267 3312 -1 1048 270 143 37 chr10 60605514 60605948 -84983340 + MER101B LTR ERV1 38 517 -53 212 327 27 45 chr10 60606403 60606513 -84982775 - MER5A DNA MER1_type 0 189 82 7346 41 1 1 chr10 60606641 60607952 -84981336 + L1PA5 LINE L1 4837 6148 -6 315 198 57 57 chr10 60607969 60608075 -84981213 + L1ME4a LINE L1 6004 6109 -12 13658 167 72 10 chr10 60609206 60611675 -84977613 + L1PA16 LINE L1 12 2635 -4214 4053 194 39 12 chr10 60611665 60612626 -84976662 + L1PA16 LINE L1 4850 5886 -983 * 1917 137 27 3 chr10 60612626 60612918 -84976370 + AluSx SINE Alu 1 299 -13 4053 194 39 12 chr10 60612918 60613667 -84975621 + L1PA16 LINE L1 5886 6613 -256 350 286 15 30 chr10 60613766 60613899 -84975389 - MLT1E2 LTR MaLR -440 186 56 818 317 16 8 chr10 60614749 60614992 -84974296 - HERV16 LTR ERVL -1265 4389 4145 439 327 28 42 chr10 60615007 60615224 -84974064 - HERV16 LTR ERVL -4761 235 22 1983 133 0 7 chr10 60615225 60615518 -84973770 + AluSg SINE Alu 1 291 -19 817 356 67 7 chr10 60615555 60615960 -84973328 - LTR16A LTR ERVL -6 444 16 779 223 79 30 chr10 60616097 60616299 -84972989 - MER58C DNA MER1_type 0 215 4 682 312 86 0 chr10 60616391 60616625 -84972663 - MIR SINE MIR -6 256 3 1874 172 24 32 chr10 60616816 60617194 -84972094 - THE1C LTR MaLR 0 375 1 23 0 0 0 chr10 60617331 60617354 -84971934 + AT_rich Low_complexity Low_complexity 1 23 0 344 233 44 0 chr10 60617424 60617514 -84971774 - MER112 DNA MER1_type -9 251 158 369 0 0 0 chr10 60617581 60617622 -84971666 + (TG)n Simple_repeat Simple_repeat 2 42 0 2125 93 0 0 chr10 60617855 60618123 -84971165 + AluSg SINE Alu 20 287 -23 265 293 197 0 chr10 60618228 60618375 -84970913 + L3b LINE CR1 1285 1460 -123 23 86 0 0 chr10 60618801 60618859 -84970429 + AT_rich Low_complexity Low_complexity 1 58 0 2073 154 103 5 chr10 60619450 60619840 -84969448 - MSTA LTR MaLR 0 428 1 8492 176 51 4 chr10 60619840 60621418 -84967870 - MSTA-int LTR MaLR 0 1651 1 1681 179 196 0 chr10 60621418 60621776 -84967512 - MSTA LTR MaLR 0 428 1 32 43 0 0 chr10 60623289 60623335 -84965953 + AT_rich Low_complexity Low_complexity 1 46 0 204 200 0 0 chr10 60624984 60625029 -84964259 + (TA)n Simple_repeat Simple_repeat 1 45 0 2137 117 7 0 chr10 60625076 60625375 -84963913 - AluSx SINE Alu -11 301 1 477 34 0 0 chr10 60626124 60626183 -84963105 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 269 157 20 0 chr10 60626547 60626598 -84962690 + L1M4 LINE L1 2302 2353 -3793 376 305 130 0 chr10 60627082 60627236 -84962052 + MIR SINE MIR 19 192 -70 198 103 0 0 chr10 60627358 60627387 -84961901 + (CA)n Simple_repeat Simple_repeat 2 30 0 24 0 0 0 chr10 60627546 60627570 -84961718 + AT_rich Low_complexity Low_complexity 1 24 0 404 288 14 7 chr10 60628232 60628371 -84960917 - L1ME LINE L1 -499 5622 5483 22334 96 14 9 chr10 60628552 60632647 -84956641 - L1PA7 LINE L1 -12 6142 2041 2050 111 0 0 chr10 60632646 60632935 -84956353 + L1PA7 LINE L1 1736 2024 -4122 * 21 36 0 0 chr10 60632991 60633019 -84956269 + AT_rich Low_complexity Low_complexity 1 28 0 280 321 15 22 chr10 60633461 60633598 -84955690 + L2 LINE L2 3167 3302 -11 27 0 0 0 chr10 60633958 60633985 -84955303 + AT_rich Low_complexity Low_complexity 1 27 0 544 250 14 7 chr10 60634349 60634489 -84954799 - L1 LINE L1 -1151 4995 4855 237 65 0 0 chr10 60635351 60635382 -84953906 + (TA)n Simple_repeat Simple_repeat 2 32 0 689 254 10 35 chr10 60635717 60636006 -84953282 + L1ME2 LINE L1 5849 6155 -9 2398 50 7 13 chr10 60636513 60636816 -84952472 + AluY SINE Alu 1 301 -10 2008 195 14 16 chr10 60636913 60637348 -84951940 + L1MA10 LINE L1 4418 4851 -1295 2588 190 28 5 chr10 60637348 60637897 -84951391 + L1MA10 LINE L1 5750 6325 -9 23 0 0 0 chr10 60639224 60639247 -84950041 + AT_rich Low_complexity Low_complexity 1 23 0 260 146 0 0 chr10 60639290 60639338 -84949950 - L1MA7 LINE L1 -247 6044 5997 31 68 0 0 chr10 60639376 60639435 -84949853 + AT_rich Low_complexity Low_complexity 1 59 0 23 101 0 0 chr10 60639716 60639795 -84949493 + AT_rich Low_complexity Low_complexity 1 79 0 3174 39 0 0 chr10 60640208 60640596 -84948692 + L1PA4 LINE L1 5768 6155 0 205 367 68 62 chr10 60641986 60642370 -84946918 - L2 LINE L2 -590 2724 2339 35 24 0 0 chr10 60643535 60643577 -84945711 + AT_rich Low_complexity Low_complexity 1 42 0 182 295 90 0 chr10 60644796 60644874 -84944414 + L2 LINE L2 1898 1982 -1332 184 339 36 36 chr10 60645260 60645372 -84943916 + MIR SINE MIR 69 180 -82 21 0 0 0 chr10 60645682 60645703 -84943585 + AT_rich Low_complexity Low_complexity 1 21 0 3397 164 14 13 chr10 60647082 60647717 -84941571 - Tigger3b DNA MER2_type -10 1221 586 4794 152 20 44 chr10 60647718 60648630 -84940658 - L1PA16 LINE L1 -6 6811 5922 3970 221 19 2 chr10 60648640 60649581 -84939707 - L1PA16 LINE L1 -922 5875 4919 9089 241 67 35 chr10 60649637 60653471 -84935817 + L1PA13 LINE L1 1 3973 -2824 2496 64 3 3 chr10 60653471 60653782 -84935506 + AluY SINE Alu 1 311 0 9089 241 67 35 chr10 60653782 60654020 -84935268 + L1PA13 LINE L1 3973 4202 -2595 2175 112 0 0 chr10 60654038 60654341 -84934947 + AluSx SINE Alu 4 306 -6 2158 258 47 29 chr10 60654395 60655259 -84934029 - L1PA16 LINE L1 -4354 2443 1556 1529 102 5 0 chr10 60655267 60655482 -84933806 - Tigger3b DNA MER2_type -677 554 339 249 97 0 81 chr10 60655485 60655547 -84933741 + LTR66 LTR ERVL 383 439 -171 1451 218 43 0 chr10 60655555 60655858 -84933430 - Tigger3b DNA MER2_type -912 319 4 14010 167 14 26 chr10 60655991 60659472 -84929816 + L1PA12 LINE L1 2667 6161 -7 341 314 81 35 chr10 60659773 60660203 -84929085 - L1MDa LINE L1 -4559 1981 1532 24 53 0 0 chr10 60660821 60660859 -84928429 + AT_rich Low_complexity Low_complexity 1 38 0 8863 223 70 41 chr10 60660859 60661094 -84928194 - L1MCa LINE L1 -1401 5025 4798 1685 162 10 36 chr10 60661094 60661403 -84927885 - AluJb SINE Alu -11 301 1 8863 223 70 41 chr10 60661403 60661790 -84927498 - L1MCa LINE L1 -1628 4798 4424 1818 140 46 0 chr10 60661790 60662075 -84927213 - AluSx SINE Alu -14 298 1 8863 223 70 41 chr10 60662075 60666322 -84922966 - L1MCa LINE L1 -2002 4424 10 24 0 0 0 chr10 60667294 60667318 -84921970 + AT_rich Low_complexity Low_complexity 1 24 0 937 199 45 32 chr10 60667610 60667831 -84921457 - L1MD2 LINE L1 -40 6319 6096 282 53 26 0 chr10 60667840 60667878 -84921410 + MADE1 DNA Mariner 1 39 -41 327 65 0 0 chr10 60669014 60669060 -84920228 - MADE1 DNA Mariner 0 80 35 730 173 0 23 chr10 60669396 60669529 -84919759 - FLAM_A SINE Alu -1 132 3 1716 234 58 11 chr10 60669815 60670260 -84919028 + MLT1C LTR MaLR 2 467 0 294 228 82 40 chr10 60670672 60670851 -84918437 - L1MC5 LINE L1 -188 7832 7610 527 335 3 47 chr10 60670966 60671262 -84918026 - L1MC4a LINE L1 -279 7529 7247 238 276 61 10 chr10 60671405 60671503 -84917785 - HAL1 LINE L1 -1185 1322 1220 3231 124 2 6 chr10 60671528 60672026 -84917262 - L1PB2 LINE L1 -2 6149 5654 933 236 62 26 chr10 60672026 60672335 -84916953 - L1PB2 LINE L1 -928 5218 4899 2363 256 18 9 chr10 60672343 60673022 -84916266 - L1PB2 LINE L1 -2271 3875 3191 279 339 24 31 chr10 60673058 60673185 -84916103 + MIR3 SINE MIR 46 171 -37 1039 169 48 16 chr10 60674110 60674134 -84915154 - L1M2 LINE L1 -743 5403 5381 16596 98 5 3 chr10 60674134 60677354 -84911934 - L1PA7 LINE L1 -6 6148 2926 1039 169 48 16 chr10 60677354 60677697 -84911591 - L1M2 LINE L1 -765 5381 5156 21 0 0 0 chr10 60677795 60677816 -84911472 + AT_rich Low_complexity Low_complexity 1 21 0 2183 102 7 0 chr10 60678452 60678740 -84910548 + AluY SINE Alu 5 290 -21 782 282 103 25 chr10 60679181 60679656 -84909632 + L1ME2 LINE L1 5324 5835 -329 578 301 34 8 chr10 60679703 60679942 -84909346 + L1ME2 LINE L1 5915 6159 -5 255 312 0 0 chr10 60680151 60680244 -84909044 + (TCTA)n Simple_repeat Simple_repeat 4 96 0 347 259 57 67 chr10 60680436 60680629 -84908659 - MLT1G LTR MaLR -6 561 371 1935 148 16 0 chr10 60680713 60681016 -84908272 - AluSx SINE Alu -4 308 1 607 285 27 43 chr10 60681030 60681291 -84907997 - MLT1G LTR MaLR -294 296 42 254 156 16 0 chr10 60681356 60681420 -84907868 - L1M4 LINE L1 -3166 2980 2916 32 17 0 52 chr10 60682197 60682255 -84907033 + AT_rich Low_complexity Low_complexity 1 55 0 2006 133 14 0 chr10 60682489 60682783 -84906505 + AluSq SINE Alu 1 298 -15 2076 164 45 3 chr10 60682858 60683237 -84906051 + L1MA9 LINE L1 5615 6009 -303 2502 141 5 21 chr10 60685209 60685636 -84903652 - MSTA-int LTR MaLR -1231 420 1 2680 144 12 14 chr10 60685636 60686065 -84903223 - MSTA LTR MaLR 0 428 1 672 259 45 9 chr10 60686066 60686290 -84902998 + L1MB3 LINE L1 5926 6157 -26 996 288 93 55 chr10 60686943 60687467 -84901821 + MER21B LTR ERV1 158 701 -162 35 0 0 0 chr10 60687537 60687572 -84901716 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr10 60687623 60687645 -84901643 + AT_rich Low_complexity Low_complexity 1 22 0 27 0 0 0 chr10 60688027 60688054 -84901234 + AT_rich Low_complexity Low_complexity 1 27 0 21 0 0 0 chr10 60688323 60688344 -84900944 + AT_rich Low_complexity Low_complexity 1 21 0 770 273 65 14 chr10 60688993 60689268 -84900020 - MER46C DNA MER2_type -30 308 20 221 284 202 67 chr10 60689273 60689344 -84899944 - MIR SINE MIR -26 236 176 2214 67 0 14 chr10 60689344 60689662 -84899626 - AluY SINE Alu 0 317 4 221 284 202 67 chr10 60689662 60689797 -84899491 - MIR SINE MIR -86 176 1 1767 245 45 57 chr10 60690385 60691005 -84898283 - MER90 LTR ERV1 -1 613 1 23 33 0 0 chr10 60691148 60691178 -84898110 + AT_rich Low_complexity Low_complexity 1 30 0 2041 144 24 39 chr10 60691183 60691564 -84897724 + THE1C LTR MaLR 1 375 0 1056 243 12 18 chr10 60691564 60691898 -84897390 + THE1C-int LTR MaLR 1 332 -1248 247 167 0 19 chr10 60692260 60692314 -84896974 - Alu SINE Alu -247 53 1 233 318 170 50 chr10 60692431 60692714 -84896574 - L2 LINE L2 -116 3156 2840 962 209 58 35 chr10 60692799 60693058 -84896230 - AluJb SINE Alu -11 301 37 1852 161 7 3 chr10 60693590 60693895 -84895393 + AluSx SINE Alu 1 306 -6 1110 150 12 0 chr10 60694859 60695019 -84894269 - AluJb SINE Alu -16 296 135 2014 148 0 6 chr10 60695019 60695330 -84893958 - AluSx SINE Alu -1 311 3 187 284 47 88 chr10 60695402 60695550 -84893738 + L2 LINE L2 2344 2485 -829 361 341 39 16 chr10 60695687 60695869 -84893419 + MIR SINE MIR 48 233 -29 400 214 0 0 chr10 60696108 60696206 -84893082 - FLAM_C SINE Alu -6 137 40 2437 155 9 24 chr10 60697443 60697868 -84891420 + MSTA LTR MaLR 1 419 -9 21405 82 16 4 chr10 60699701 60702583 -84886705 - HERVL LTR ERVL -16 5638 2724 597 229 10 45 chr10 60703045 60703246 -84886042 - L1MA9 LINE L1 -45 6267 6074 402 186 0 93 chr10 60703250 60703347 -84885941 + L1M2 LINE L1 5561 5648 -652 6420 190 138 60 chr10 60703348 60704973 -84884315 + MER52A LTR ERV1 4 1755 0 405 156 0 0 chr10 60704990 60705054 -84884234 + L1M2 LINE L1 5678 5741 -550 297 303 84 45 chr10 60705114 60705292 -84883996 + MIR SINE MIR 3 187 -75 702 292 198 6 chr10 60706610 60707001 -84882287 + L2 LINE L2 2669 3125 -188 344 224 204 31 chr10 60707089 60707255 -84882033 + MER63 DNA MER1_type 11 1678 -10 326 247 65 0 chr10 60707347 60707440 -84881848 + MLT1I LTR MaLR 311 409 0 276 322 66 11 chr10 60707631 60707814 -84881474 - MIR SINE MIR 0 262 70 945 93 0 14 chr10 60708723 60708862 -84880426 - AluY SINE Alu -2 309 173 1412 266 59 43 chr10 60709457 60710101 -84879187 - L1ME1 LINE L1 -5 6161 5508 491 225 125 0 chr10 60710282 60710442 -84878846 - L1ME1 LINE L1 -1243 4903 4724 3215 145 5 100 chr10 60710738 60711409 -84877879 - MER4D LTR ERV1 -169 734 128 640 247 102 90 chr10 60711927 60712251 -84877037 - MER4C LTR ERV1 0 695 276 2832 6 0 0 chr10 60712251 60712569 -84876719 - L1HS LINE L1 -1 6154 5837 464 214 191 35 chr10 60712569 60712742 -84876546 - MER4C LTR ERV1 -265 200 1 184 196 0 43 chr10 60712930 60712976 -84876312 + MIR SINE MIR 164 207 -55 362 313 97 21 chr10 60713001 60713145 -84876143 - MIR SINE MIR -34 228 74 328 282 12 0 chr10 60714934 60715019 -84874269 - MLT1L LTR MaLR -335 280 195 1549 184 10 34 chr10 60715261 60715358 -84873930 + AluJb SINE Alu 19 117 -195 2258 160 54 5 chr10 60715358 60715764 -84873524 - MSTA LTR MaLR -2 426 1 1549 184 10 34 chr10 60715764 60715960 -84873328 + AluJb SINE Alu 117 305 -7 738 125 31 0 chr10 60715978 60716106 -84873182 - L1M2 LINE L1 -502 5798 5667 1579 245 132 28 chr10 60716429 60716936 -84872352 + MLT1E1 LTR MaLR 10 569 -85 1923 234 42 25 chr10 60716949 60717420 -84871868 + L1M1 LINE L1 12 490 -7075 1674 141 4 0 chr10 60717420 60717662 -84871626 + THE1B LTR MaLR 1 243 -121 5907 157 42 19 chr10 60717687 60719243 -84870045 + L1MA2 LINE L1 4711 6304 0 395 190 0 0 chr10 60719259 60719338 -84869950 + MLT1E1 LTR MaLR 575 653 -1 23 78 0 0 chr10 60719688 60719739 -84869549 + AT_rich Low_complexity Low_complexity 1 51 0 1569 289 44 22 chr10 60720556 60721469 -84867819 - L1ME1 LINE L1 -1780 4366 3434 244 278 189 9 chr10 60721604 60721816 -84867472 - L1ME1 LINE L1 -2936 3210 2961 317 289 46 33 chr10 60721831 60721983 -84867305 - L1ME1 LINE L1 -3422 2724 2571 1384 256 60 32 chr10 60722031 60722433 -84866855 + MLT1E2 LTR MaLR 212 624 -2 738 253 124 13 chr10 60723327 60723560 -84865728 + MIR SINE MIR 2 260 -2 1719 180 9 29 chr10 60723994 60724338 -84864950 - MER1B DNA MER1_type 0 337 1 24 0 0 0 chr10 60724568 60724592 -84864696 + AT_rich Low_complexity Low_complexity 1 24 0 181 288 55 41 chr10 60725332 60725405 -84863883 - L2 LINE L2 -2 3311 3238 400 271 141 30 chr10 60726156 60726355 -84862933 - MIR SINE MIR -27 235 15 22 0 0 0 chr10 60727283 60727305 -84861983 + AT_rich Low_complexity Low_complexity 1 22 0 3629 108 4 4 chr10 60727430 60727941 -84861347 + MER9 LTR ERVK 1 511 0 2429 77 0 13 chr10 60729024 60729337 -84859951 - AluY SINE Alu -2 309 1 1120 251 77 22 chr10 60729516 60730147 -84859141 + L1MC4 LINE L1 6337 7420 -622 783 211 0 49 chr10 60730621 60730806 -84858482 - AluJ SINE Alu -1 311 136 458 227 29 50 chr10 60732789 60732937 -84856351 + MLT1D LTR MaLR 6 107 -398 1538 211 98 33 chr10 60733922 60734349 -84854939 + MSTB2 LTR MaLR 2 456 -1 223 302 94 28 chr10 60735298 60735404 -84853884 + L2 LINE L2 2947 3059 -213 203 371 34 34 chr10 60736335 60736424 -84852864 + L2 LINE L2 2996 3084 -188 1040 120 0 16 chr10 60736482 60736665 -84852623 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 774 186 0 45 chr10 60736736 60736892 -84852396 - AluJ SINE Alu -153 159 11 612 302 45 33 chr10 60737114 60737356 -84851932 + MIR SINE MIR 6 250 -12 194 232 0 87 chr10 60737856 60737925 -84851363 + MIR SINE MIR 200 262 0 2402 84 0 3 chr10 60739295 60739603 -84849685 - AluSp SINE Alu -4 309 3 204 97 0 0 chr10 60739971 60740002 -84849286 + (CA)n Simple_repeat Simple_repeat 2 32 0 466 133 78 141 chr10 60740677 60740805 -84848483 + AluJb SINE Alu 178 297 -15 207 0 0 0 chr10 60740903 60740926 -84848362 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 206 158 26 0 chr10 60741272 60741310 -84847978 + (CA)n Simple_repeat Simple_repeat 2 40 0 756 260 101 38 chr10 60742178 60742603 -84846685 + MLT1E1 LTR MaLR 1 396 -228 22 0 0 0 chr10 60742988 60743010 -84846278 + AT_rich Low_complexity Low_complexity 1 22 0 2111 138 158 60 chr10 60743219 60743720 -84845568 + LTR8A LTR ERV1 1 550 -177 3039 70 8 93 chr10 60743720 60744204 -84845084 + MLT2A1 LTR ERVL 2 444 0 34974 83 5 3 chr10 60744204 60748782 -84840506 + HERVL-A1 LTR ERVL 1 4587 -1067 8218 83 15 6 chr10 60748907 60750003 -84839285 + HERVL-A1 LTR ERVL 4549 5654 0 2785 92 41 13 chr10 60750003 60750396 -84838892 + MLT2A1 LTR ERVL 1 404 -40 468 70 84 0 chr10 60750408 60750550 -84838738 + (TA)n Simple_repeat Simple_repeat 1 154 0 311 143 9 0 chr10 60750550 60750612 -84838676 + MLT2A1 LTR ERVL 392 444 0 * 580 235 142 0 chr10 60750612 60750771 -84838517 + LTR8A LTR ERV1 546 727 0 21 57 0 0 chr10 60750810 60750845 -84838443 + AT_rich Low_complexity Low_complexity 1 35 0 192 152 0 0 chr10 60751023 60751056 -84838232 + (TAA)n Simple_repeat Simple_repeat 2 34 0 23 33 0 0 chr10 60751564 60751594 -84837694 + AT_rich Low_complexity Low_complexity 1 30 0 330 67 0 0 chr10 60751761 60751806 -84837482 + (CA)n Simple_repeat Simple_repeat 2 46 0 186 150 0 0 chr10 60752102 60752142 -84837146 + (TG)n Simple_repeat Simple_repeat 2 41 0 1367 205 129 18 chr10 60752156 60752666 -84836622 + MER67C LTR ERV1 1 514 0 1253 215 98 23 chr10 60752947 60753254 -84836034 - MER2 DNA MER2_type -5 340 11 324 295 91 62 chr10 60753348 60753589 -84835699 + MIR SINE MIR 2 249 -13 187 216 34 57 chr10 60753561 60753649 -84835639 - MER5C DNA MER1_type -59 265 180 * 730 276 190 5 chr10 60754627 60755058 -84834230 + L1M4c LINE L1 1061 1571 -4813 7240 180 23 23 chr10 60755063 60756366 -84832922 + L1MA3 LINE L1 137 1439 -6126 13921 174 26 16 chr10 60756371 60759880 -84829408 + L1MA3 LINE L1 2319 5907 -1817 1529 211 13 13 chr10 60759880 60760192 -84829096 + AluSx SINE Alu 1 312 0 13921 174 26 16 chr10 60760192 60762030 -84827258 + L1MA3 LINE L1 5907 7724 0 4002 240 49 30 chr10 60762045 60763292 -84825996 - L1M4 LINE L1 -5258 1284 15 1672 185 27 3 chr10 60763320 60763649 -84825639 - L1MA4 LINE L1 -191 6109 5773 269 348 27 27 chr10 60763704 60763888 -84825400 + L1ME LINE L1 5626 5809 -361 40 67 0 0 chr10 60763948 60764023 -84825265 + AT_rich Low_complexity Low_complexity 1 75 0 1138 241 54 48 chr10 60764535 60764995 -84824293 - L1ME1 LINE L1 -5 6161 5699 667 235 70 20 chr10 60765002 60765202 -84824086 - L1ME1 LINE L1 -617 5549 5340 336 64 0 0 chr10 60766413 60766460 -84822828 + (CA)n Simple_repeat Simple_repeat 1 47 0 184 397 89 28 chr10 60766463 60766642 -84822646 + L3 LINE CR1 1384 1573 -4 23 0 0 0 chr10 60766716 60766739 -84822549 + AT_rich Low_complexity Low_complexity 1 23 0 1163 234 29 26 chr10 60767211 60767427 -84821861 + L1ME2 LINE L1 5453 5672 -492 985 172 11 0 chr10 60767427 60767613 -84821675 + L1MB4 LINE L1 5993 6180 0 1163 234 29 26 chr10 60767613 60767708 -84821580 + L1ME2 LINE L1 5672 5765 -399 949 192 12 12 chr10 60767703 60768028 -84821260 + L1MA4A LINE L1 5895 6280 -23 * 384 253 21 0 chr10 60768094 60768189 -84821099 + MER58 DNA MER1_type 2 98 -117 344 123 0 15 chr10 60768224 60768289 -84820999 + (CA)n Simple_repeat Simple_repeat 1 64 0 507 167 76 15 chr10 60768389 60768521 -84820767 + L1ME2 LINE L1 5808 5947 -217 * 812 215 90 50 chr10 60768519 60768798 -84820490 + L1MC4 LINE L1 7360 7649 -393 2364 98 0 0 chr10 60768954 60769249 -84820039 + AluSc SINE Alu 1 295 -14 323 192 26 26 chr10 60770135 60770213 -84819075 - L1MC4 LINE L1 -1351 6691 6614 2147 104 0 14 chr10 60771070 60771367 -84817921 + AluSg SINE Alu 1 293 -17 180 309 82 36 chr10 60771855 60771965 -84817323 + L3 LINE CR1 1212 1326 -251 2387 74 0 3 chr10 60772892 60773190 -84816098 + AluY SINE Alu 1 297 -14 751 219 25 74 chr10 60773329 60773408 -84815880 + L1PA15 LINE L1 8 89 -7492 2193 124 0 0 chr10 60773408 60773707 -84815581 - AluSq SINE Alu -12 301 3 751 219 25 74 chr10 60773707 60773869 -84815419 + L1PA15 LINE L1 89 237 -7344 517 138 0 0 chr10 60773872 60773952 -84815336 - MSTA LTR MaLR -348 80 1 9132 156 10 31 chr10 60773952 60775564 -84813724 - MSTA-int LTR MaLR 0 1580 3 1846 147 155 16 chr10 60775568 60775943 -84813345 - MSTA LTR MaLR -1 427 1 13441 213 37 14 chr10 60775948 60779327 -84809961 + L1PA15 LINE L1 3267 6766 -837 2167 109 3 0 chr10 60779327 60779643 -84809645 + AluSp SINE Alu 1 317 0 13441 213 37 14 chr10 60779643 60780119 -84809169 + L1PA15 LINE L1 6766 7229 -374 227 191 0 0 chr10 60780107 60780154 -84809134 - LTR66 LTR ERVL -170 440 394 * 259 250 0 22 chr10 60780114 60780206 -84809082 - L1MC4 LINE L1 -1339 6703 6614 228 167 0 0 chr10 60780186 60780234 -84809054 - LTR66 LTR ERVL -171 439 392 * 221 136 0 23 chr10 60780206 60780250 -84809038 + (TA)n Simple_repeat Simple_repeat 2 44 0 * 1423 103 5 15 chr10 60780290 60780485 -84808803 + AluSc SINE Alu 1 193 -116 180 111 0 0 chr10 60780485 60780512 -84808776 + (A)n Simple_repeat Simple_repeat 1 27 0 1829 167 8 37 chr10 60780513 60780554 -84808734 + L1PA15 LINE L1 7253 7294 -309 2185 113 0 0 chr10 60780554 60780845 -84808443 + AluSx SINE Alu 1 291 -21 1829 167 8 37 chr10 60780845 60781156 -84808132 + L1PA15 LINE L1 7294 7595 -8 22 0 0 0 chr10 60781388 60781410 -84807878 + AT_rich Low_complexity Low_complexity 1 22 0 198 338 25 12 chr10 60782183 60782263 -84807025 + L2 LINE L2 3187 3267 -5 277 317 45 40 chr10 60782312 60782536 -84806752 - MLT1J LTR MaLR 0 511 287 1314 200 7 32 chr10 60783127 60783407 -84805881 - AluJo SINE Alu -19 293 21 1401 249 52 6 chr10 60784024 60784373 -84804915 + MLT1A1 LTR MaLR 1 365 0 195 42 0 0 chr10 60784537 60784561 -84804727 + (TA)n Simple_repeat Simple_repeat 1 24 0 233 196 76 43 chr10 60784568 60784660 -84804628 - L1MC3 LINE L1 -1139 6646 6552 807 195 59 18 chr10 60784986 60785268 -84804020 - MLT1B LTR MaLR 0 374 1 21 0 0 0 chr10 60785288 60785309 -84803979 + AT_rich Low_complexity Low_complexity 1 21 0 563 277 73 96 chr10 60785405 60785938 -84803350 + MLT1G1 LTR MaLR 4 510 -32 3239 206 58 26 chr10 60786550 60787432 -84801856 + L1MA10 LINE L1 3434 4343 -1803 2303 61 7 3 chr10 60787441 60787738 -84801550 - AluY SINE Alu -13 298 1 589 164 0 23 chr10 60787899 60788027 -84801261 + GA-rich Low_complexity Low_complexity 3 127 0 324 238 91 56 chr10 60788050 60788281 -84801007 - L1ME4a LINE L1 -3 6118 5880 3078 239 82 4 chr10 60788285 60788616 -84800672 - L1MB7 LINE L1 -10 6174 5870 1651 187 37 0 chr10 60788616 60788916 -84800372 - AluJo SINE Alu -1 311 1 3078 239 82 4 chr10 60788916 60790029 -84799259 - L1MB7 LINE L1 -314 5870 4619 1117 240 53 9 chr10 60790370 60790707 -84798581 + L1MA10 LINE L1 4337 4688 -1458 3387 241 38 5 chr10 60790726 60791604 -84797684 - L1ME1 LINE L1 -6 6160 5254 3675 203 41 32 chr10 60791609 60792745 -84796543 + L1MA10 LINE L1 4691 5844 -490 2448 173 29 9 chr10 60792745 60793197 -84796091 - LOR1b LTR ERV1 0 461 1 3675 203 41 32 chr10 60793197 60793592 -84795696 + L1MA10 LINE L1 5844 6234 -100 275 168 0 196 chr10 60793594 60793667 -84795621 - L1MB1 LINE L1 -199 5969 5922 312 27 0 0 chr10 60793667 60793704 -84795584 + (TG)n Simple_repeat Simple_repeat 2 38 0 275 168 0 196 chr10 60793704 60793737 -84795551 - L1MB1 LINE L1 -246 5922 5884 22 0 0 0 chr10 60793741 60793763 -84795525 + AT_rich Low_complexity Low_complexity 1 22 0 22 56 0 0 chr10 60793820 60793856 -84795432 + AT_rich Low_complexity Low_complexity 1 36 0 463 259 116 5 chr10 60795573 60795768 -84793520 + MIR SINE MIR 39 254 -8 183 284 104 45 chr10 60796213 60796347 -84792941 - L2 LINE L2 -20 3293 3152 228 170 0 19 chr10 60797269 60797322 -84791966 - L1M1 LINE L1 -396 5906 5855 1087 192 124 133 chr10 60797330 60797587 -84791701 - L1MC4 LINE L1 -1 8041 7783 1777 164 25 27 chr10 60797587 60797952 -84791336 - MER47A DNA MER2_type -1 365 2 1087 192 124 133 chr10 60797952 60798252 -84791036 - L1MC4 LINE L1 -259 7783 7489 * 4631 119 28 1 chr10 60798238 60798946 -84790342 - L1MA2 LINE L1 -240 7483 6757 * 11446 200 35 11 chr10 60798932 60801073 -84788215 - L1MA2 LINE L1 -1347 6218 3985 2076 131 20 0 chr10 60801073 60801379 -84787909 - AluSx SINE Alu 0 312 1 11446 200 35 11 chr10 60801379 60802146 -84787142 - L1MA2 LINE L1 -3580 3985 3238 282 162 176 0 chr10 60802160 60802228 -84787060 + MLT2F LTR ERVL 581 660 -3 21 0 0 0 chr10 60802262 60802283 -84787005 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr10 60802322 60802346 -84786942 + AT_rich Low_complexity Low_complexity 1 24 0 243 277 0 0 chr10 60803067 60803132 -84786156 + (TA)n Simple_repeat Simple_repeat 2 66 0 1159 241 8 0 chr10 60803132 60803368 -84785920 - MER8 DNA MER2_type 0 239 2 1270 261 24 60 chr10 60803375 60803843 -84785445 + MLT1D LTR MaLR 36 486 -19 409 268 32 8 chr10 60804567 60804690 -84784598 - L2 LINE L2 0 3313 3188 5171 25 0 2 chr10 60805016 60805621 -84783667 - L1PA3 LINE L1 -5 6150 5547 4862 21 0 0 chr10 60805621 60806185 -84783103 + L1P LINE L1 3766 4329 -1817 2241 64 3 14 chr10 60806185 60806482 -84782806 - AluY SINE Alu -17 294 1 189 0 0 0 chr10 60806753 60806774 -84782514 + (GA)n Simple_repeat Simple_repeat 2 22 0 23 0 0 0 chr10 60807359 60807382 -84781906 + AT_rich Low_complexity Low_complexity 1 23 0 195 139 0 0 chr10 60808665 60808701 -84780587 + (CA)n Simple_repeat Simple_repeat 1 36 0 210 254 28 14 chr10 60809616 60809687 -84779601 + T-rich Low_complexity Low_complexity 4 75 0 3107 205 31 2 chr10 60809887 60810532 -84778756 - L1MB7 LINE L1 -41 6143 5480 1052 117 6 17 chr10 60810568 60810747 -84778541 - AluYa8 SINE Alu -8 302 126 250 153 34 0 chr10 60810791 60810850 -84778438 + CT-rich Low_complexity Low_complexity 2 62 0 1437 181 0 0 chr10 60810961 60811232 -84778056 - L1MA4 LINE L1 -9 6291 6021 244 289 46 99 chr10 60811255 60811407 -84777881 - MIR SINE MIR -108 154 11 463 352 87 5 chr10 60811848 60812067 -84777221 - MIR SINE MIR -14 248 12 945 214 0 10 chr10 60812228 60812429 -84776859 + AluJo SINE Alu 114 312 0 2159 122 19 32 chr10 60812741 60813110 -84776178 + THE1B LTR MaLR 1 364 0 24 53 0 0 chr10 60815133 60815171 -84774117 + AT_rich Low_complexity Low_complexity 1 38 0 548 293 29 38 chr10 60815698 60815937 -84773351 - LTR16B LTR ERVL -4 460 224 1955 119 0 7 chr10 60816169 60816447 -84772841 + AluSg SINE Alu 1 276 -34 233 233 41 0 chr10 60817282 60817355 -84771933 + T-rich Low_complexity Low_complexity 5 80 0 2401 150 3 0 chr10 60817480 60817854 -84771434 - THE1C LTR MaLR 0 375 1 378 42 0 0 chr10 60819672 60819720 -84769568 + (CA)n Simple_repeat Simple_repeat 2 49 0 1937 158 30 30 chr10 60819921 60820282 -84769006 - THE1C LTR MaLR 0 375 15 264 148 0 19 chr10 60820282 60820336 -84768952 + THE1-int LTR MaLR 1528 1580 0 8486 144 58 40 chr10 60820352 60821875 -84767413 - THE1C-int LTR MaLR -30 1550 1 2031 142 24 39 chr10 60821875 60822256 -84767032 - THE1C LTR MaLR 0 375 1 23 33 0 0 chr10 60822261 60822291 -84766997 + AT_rich Low_complexity Low_complexity 1 30 0 225 0 0 0 chr10 60822820 60822845 -84766443 + (CA)n Simple_repeat Simple_repeat 1 25 0 258 32 0 0 chr10 60822907 60822938 -84766350 + (TTG)n Simple_repeat Simple_repeat 2 32 0 247 257 33 99 chr10 60823290 60823442 -84765846 + MIR SINE MIR 96 237 -25 496 223 157 48 chr10 60823815 60823981 -84765307 - MIR SINE MIR -1 261 78 270 253 109 67 chr10 60824446 60825120 -84764168 + L1MEc LINE L1 861 1433 -4782 * 660 282 28 12 chr10 60825108 60825431 -84763857 + L1M4 LINE L1 3608 3935 -2211 * 2829 219 58 38 chr10 60825413 60826204 -84763084 + L1MC3 LINE L1 6541 7347 -438 579 244 0 0 chr10 60826218 60826345 -84762943 + L1ME3A LINE L1 6027 6153 -17 1688 258 116 22 chr10 60826728 60827270 -84762018 - MLT1E LTR MaLR 0 593 1 320 157 11 34 chr10 60827275 60827364 -84761924 + GA-rich Low_complexity Low_complexity 2 88 0 21 0 0 0 chr10 60828118 60828139 -84761149 + AT_rich Low_complexity Low_complexity 1 21 0 2186 126 0 0 chr10 60829114 60829423 -84759865 + AluSc SINE Alu 1 309 0 225 159 0 0 chr10 60829438 60829482 -84759806 + (CATATA)n Simple_repeat Simple_repeat 2 45 0 349 233 8 8 chr10 60829540 60829673 -84759615 + (TA)n Simple_repeat Simple_repeat 2 134 0 192 77 0 0 chr10 60830649 60830675 -84758613 + (TA)n Simple_repeat Simple_repeat 1 26 0 4234 161 5 53 chr10 60831212 60832045 -84757243 + MER54B LTR ERVL 1 793 0 21 36 0 0 chr10 60832092 60832120 -84757168 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr10 60832145 60832166 -84757122 + AT_rich Low_complexity Low_complexity 1 21 0 262 336 107 29 chr10 60833930 60834070 -84755218 - MER5A DNA MER1_type -6 183 33 22 0 0 0 chr10 60834848 60834870 -84754418 + AT_rich Low_complexity Low_complexity 1 22 0 8931 209 112 18 chr10 60835930 60839384 -84749904 - L1MA4 LINE L1 -5 6937 3149 5526 270 108 16 chr10 60839394 60841215 -84748073 - L1MA4 LINE L1 -4795 1994 7 189 349 78 23 chr10 60841498 60841627 -84747661 + MIR SINE MIR 25 160 -102 449 113 0 0 chr10 60841916 60841978 -84747310 - MSTA LTR MaLR -2 426 365 2229 70 7 10 chr10 60842693 60842994 -84746294 + AluY SINE Alu 1 300 -11 336 64 0 0 chr10 60843371 60843418 -84745870 - L1PA15 LINE L1 -9 6156 6110 1410 204 103 37 chr10 60843499 60843935 -84745353 - MLT1C LTR MaLR 0 467 3 1402 233 22 17 chr10 60843994 60844355 -84744933 + MLT1A1 LTR MaLR 3 365 0 2028 148 3 0 chr10 60844817 60845128 -84744160 - AluSx SINE Alu 0 312 1 183 235 0 0 chr10 60845171 60845222 -84744066 + (CGTG)n Simple_repeat Simple_repeat 1 51 0 23 33 0 0 chr10 60845464 60845494 -84743794 + AT_rich Low_complexity Low_complexity 1 30 0 1595 197 16 30 chr10 60846005 60846370 -84742918 - MLT1A1 LTR MaLR -1 364 5 1840 148 38 30 chr10 60846393 60846765 -84742523 + THE1C LTR MaLR 1 375 0 8856 137 37 48 chr10 60846765 60848362 -84740926 + THE1C-int LTR MaLR 1 1580 0 1877 144 43 35 chr10 60848362 60848731 -84740557 + THE1C LTR MaLR 1 372 -3 387 333 82 6 chr10 60848733 60848892 -84740396 + MIR SINE MIR 76 246 -16 2293 211 18 8 chr10 60849749 60850237 -84739051 - L1 LINE L1 -1069 5077 4585 1626 136 99 6 chr10 60850228 60850270 -84739018 + L1 LINE L1 4213 4250 -1896 * 318 26 0 0 chr10 60850270 60850309 -84738979 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 1626 136 99 6 chr10 60850309 60850618 -84738670 + L1 LINE L1 4250 4597 -1549 521 281 72 90 chr10 60850622 60850850 -84738438 - L1 LINE L1 -1983 4163 3932 1810 137 11 18 chr10 60850850 60851164 -84738124 + AluSq SINE Alu 1 312 0 521 281 72 90 chr10 60851164 60852003 -84737285 - L1 LINE L1 -2214 3932 3079 1573 197 20 7 chr10 60852003 60852303 -84736985 - AluJo SINE Alu -8 304 1 521 281 72 90 chr10 60852303 60852450 -84736838 - L1 LINE L1 -3067 3079 2931 1506 196 7 4 chr10 60852450 60852731 -84736557 - AluJb SINE Alu -30 282 1 521 281 72 90 chr10 60852731 60852953 -84736335 - L1 LINE L1 -3215 2931 2750 440 359 12 6 chr10 60852961 60853131 -84736157 + MER45A DNA AcHobo 8 178 0 247 276 0 0 chr10 60854959 60855017 -84734271 + (CATATA)n Simple_repeat Simple_repeat 3 60 0 27 100 0 0 chr10 60855447 60855537 -84733751 + AT_rich Low_complexity Low_complexity 1 90 0 1637 214 121 84 chr10 60855886 60856670 -84732618 + LTR1B LTR ERV1 1 813 -13 25 31 0 0 chr10 60857247 60857279 -84732009 + AT_rich Low_complexity Low_complexity 1 32 0 2288 87 0 0 chr10 60857344 60857632 -84731656 - AluSc SINE Alu -21 288 1 26 64 0 0 chr10 60857922 60857969 -84731319 + AT_rich Low_complexity Low_complexity 1 47 0 21 0 0 0 chr10 60858047 60858068 -84731220 + AT_rich Low_complexity Low_complexity 1 21 0 3903 139 76 58 chr10 60858708 60859960 -84729328 + pTR5 LTR ERV1 743 2295 -143 477 295 108 50 chr10 60859972 60860353 -84728935 - LTR16A LTR ERVL -55 399 1 1918 231 18 2 chr10 60860538 60860936 -84728352 + LTR57 LTR ERVL 1 404 -7 487 363 12 17 chr10 60861609 60861849 -84727439 - MIR SINE MIR -22 240 2 1772 259 73 27 chr10 60862862 60863422 -84725866 + MER90 LTR ERV1 1 586 -28 192 77 0 0 chr10 60863503 60863529 -84725759 + (TA)n Simple_repeat Simple_repeat 1 26 0 23 97 0 0 chr10 60863544 60863616 -84725672 + AT_rich Low_complexity Low_complexity 1 72 0 1284 204 82 6 chr10 60863774 60864092 -84725196 + MER2 DNA MER2_type 1 342 -2 204 40 0 0 chr10 60864218 60864243 -84725045 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 5401 144 51 16 chr10 60864331 60865158 -84724130 - L1PB1 LINE L1 0 6151 5271 198 0 0 0 chr10 60865158 60865180 -84724108 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 5401 144 51 16 chr10 60865180 60865712 -84723576 - L1PB1 LINE L1 -880 5271 4759 22 70 0 0 chr10 60865717 60865760 -84723528 + AT_rich Low_complexity Low_complexity 1 43 0 35 0 0 0 chr10 60865866 60865901 -84723387 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr10 60867055 60867076 -84722212 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr10 60868077 60868115 -84721173 + AT_rich Low_complexity Low_complexity 1 38 0 182 210 90 100 chr10 60868410 60868510 -84720778 + MIR SINE MIR 110 208 -54 303 28 0 0 chr10 60868785 60868821 -84720467 + (TA)n Simple_repeat Simple_repeat 1 36 0 279 0 0 0 chr10 60868820 60868851 -84720437 + (GA)n Simple_repeat Simple_repeat 2 32 0 * 1452 118 96 44 chr10 60870112 60870382 -84718906 + LTR12 LTR ERV1 1 284 -430 271 222 14 0 chr10 60870383 60870455 -84718833 + LTR30 LTR ERV1 552 624 -98 617 220 23 8 chr10 60870455 60870587 -84718701 + LTR12 LTR ERV1 359 492 -222 207 210 70 20 chr10 60871143 60871243 -84718045 + (TATAA)n Simple_repeat Simple_repeat 5 109 0 450 310 15 45 chr10 60872509 60872709 -84716579 - L2 LINE L2 -2 3311 3118 228 229 0 0 chr10 60872722 60872770 -84716518 - LTR33 LTR ERVL 0 521 474 248 308 13 0 chr10 60873120 60873198 -84716090 - LTR33 LTR ERVL -442 79 1 184 368 32 11 chr10 60873472 60873567 -84715721 - L2 LINE L2 -618 2696 2600 624 307 96 55 chr10 60873611 60874070 -84715218 - L2 LINE L2 -710 2604 2127 21 57 0 0 chr10 60874521 60874556 -84714732 + AT_rich Low_complexity Low_complexity 1 35 0 1917 127 34 0 chr10 60874745 60875036 -84714252 - AluSx SINE Alu -11 301 1 938 186 157 0 chr10 60875180 60875390 -84713898 + LTR54B LTR ERV1 1 243 -255 399 71 0 18 chr10 60875391 60875447 -84713841 + L1MA4 LINE L1 5909 5963 -340 1509 194 25 0 chr10 60875526 60875851 -84713437 + L1MA4 LINE L1 5962 6294 -6 487 230 143 5 chr10 60875882 60876078 -84713210 + LTR54 LTR ERV1 287 509 -1 2503 43 3 0 chr10 60878916 60879219 -84710069 + AluY SINE Alu 2 305 -6 4240 147 29 1 chr10 60880663 60881400 -84707888 - L1MA5 LINE L1 -3 6297 5541 872 285 27 55 chr10 60881400 60881803 -84707485 - L1M4 LINE L1 -6135 407 16 8697 193 61 8 chr10 60882581 60884776 -84704512 + L1MA9 LINE L1 3221 5531 -769 3693 264 42 78 chr10 60884802 60886930 -84702358 + L1MB7 LINE L1 16 2126 -4520 1225 236 30 36 chr10 60886983 60887424 -84701864 + L1MB7 LINE L1 4826 5263 -1381 1208 228 39 18 chr10 60887411 60887744 -84701544 + L1MA9 LINE L1 5936 6275 -37 * 225 220 20 0 chr10 60887766 60887816 -84701472 + L1MB7 LINE L1 5233 5283 -1361 2608 198 28 64 chr10 60888037 60888269 -84701019 + L1MB7 LINE L1 5331 5570 -1112 4171 54 13 79 chr10 60888269 60888902 -84700386 - L1PA8 LINE L1 -3 6169 5579 2608 198 28 64 chr10 60888902 60889719 -84699569 + L1MB7 LINE L1 5570 6349 -333 1144 259 6 14 chr10 60889767 60890111 -84699177 + L1MB7 LINE L1 6342 6682 0 3105 11 6 0 chr10 60890590 60890947 -84698341 + L1PA2 LINE L1 5797 6155 0 28 29 0 0 chr10 60892189 60892224 -84697064 + AT_rich Low_complexity Low_complexity 1 35 0 29 28 0 0 chr10 60892354 60892390 -84696898 + AT_rich Low_complexity Low_complexity 1 36 0 190 348 0 14 chr10 60892533 60892602 -84696686 + MER5A DNA MER1_type 83 150 -39 1444 88 65 5 chr10 60894722 60894937 -84694351 + MER30 DNA MER1_type 3 230 0 474 248 0 0 chr10 60895060 60895165 -84694123 + FLAM_A SINE Alu 1 105 -37 791 246 49 0 chr10 60895165 60895348 -84693940 + MER20 DNA MER1_type 4 195 -24 206 271 24 129 chr10 60895584 60895669 -84693619 + L2 LINE L2 3158 3233 -39 193 135 56 34 chr10 60896252 60896341 -84692947 + (TTATA)n Simple_repeat Simple_repeat 4 94 0 579 89 0 0 chr10 60896539 60896618 -84692670 + AluS SINE Alu 1 79 -233 291 299 8 17 chr10 60897640 60897757 -84691531 + L1MEc LINE L1 1535 1650 -4746 22 0 0 0 chr10 60897821 60897843 -84691445 + AT_rich Low_complexity Low_complexity 1 22 0 238 214 119 24 chr10 60898300 60898384 -84690904 + L1M4b LINE L1 29 120 -6739 360 342 68 8 chr10 60899589 60899826 -84689462 - MIR SINE MIR 0 262 12 21 0 0 0 chr10 60899961 60899982 -84689306 + AT_rich Low_complexity Low_complexity 1 21 0 918 266 83 75 chr10 60899983 60900514 -84688774 + L1ME2 LINE L1 5384 5918 -246 643 191 22 12 chr10 60900510 60900662 -84688626 - L1M2 LINE L1 -397 5771 5622 * 704 211 78 0 chr10 60900978 60901120 -84688168 + AluJb SINE Alu 142 294 -18 242 280 78 47 chr10 60901150 60901343 -84687945 - MLT1H1-int LTR MaLR -899 472 274 745 298 119 40 chr10 60901483 60901980 -84687308 - MLT1H1 LTR MaLR 0 555 20 2903 6 0 0 chr10 60902452 60902770 -84686518 - AluYb8 SINE Alu 0 318 1 358 286 91 10 chr10 60905196 60905395 -84683893 - L1ME4a LINE L1 -5 6116 5902 211 227 0 15 chr10 60905465 60905531 -84683757 + (TA)n Simple_repeat Simple_repeat 2 66 0 802 143 0 0 chr10 60905747 60905866 -84683422 - FLAM_C SINE Alu -24 119 1 362 331 71 38 chr10 60905867 60906133 -84683155 - L1M4 LINE L1 -1952 4194 3920 21 0 0 0 chr10 60906190 60906211 -84683077 + AT_rich Low_complexity Low_complexity 1 21 0 287 228 18 105 chr10 60906446 60906560 -84682728 - MER103 DNA DNA -58 108 5 229 213 118 79 chr10 60907210 60907337 -84681951 + MLT1J2 LTR MaLR 1 132 -318 435 314 39 13 chr10 60907462 60907618 -84681670 + MLT1J2 LTR MaLR 281 440 -10 24 32 0 0 chr10 60908113 60908144 -84681144 + AT_rich Low_complexity Low_complexity 1 31 0 2056 64 4 4 chr10 60908250 60908516 -84680772 - AluY SINE Alu -45 266 1 320 260 0 13 chr10 60908794 60908871 -84680417 + L1MD1 LINE L1 4006 4081 -2065 3819 230 68 28 chr10 60908895 60910090 -84679198 + L1MD1 LINE L1 4706 5970 -272 2137 121 0 0 chr10 60910090 60910388 -84678900 - AluSc SINE Alu -11 298 1 3819 230 68 28 chr10 60910388 60910672 -84678616 + L1MD1 LINE L1 5970 6241 -1 1790 170 56 19 chr10 60910861 60911237 -84678051 - MLT1B LTR MaLR 0 390 1 405 0 0 0 chr10 60911402 60911447 -84677841 + (CA)n Simple_repeat Simple_repeat 1 45 0 34 72 0 0 chr10 60912292 60912361 -84676927 + AT_rich Low_complexity Low_complexity 1 69 0 201 159 0 0 chr10 60912590 60912634 -84676654 + (CA)n Simple_repeat Simple_repeat 1 44 0 232 326 0 15 chr10 60913242 60913374 -84675914 + (TA)n Simple_repeat Simple_repeat 2 131 0 283 268 21 10 chr10 60913378 60913475 -84675813 + MER103 DNA DNA 20 117 -49 2223 124 6 6 chr10 60913554 60913893 -84675395 - L1PA11 LINE L1 0 6174 5836 1782 144 0 3 chr10 60913894 60914192 -84675096 + L1P LINE L1 3620 3916 -2230 232 320 77 19 chr10 60914903 60915059 -84674229 + MIR SINE MIR 23 187 -75 3664 194 104 25 chr10 60915257 60916044 -84673244 - MER21B LTR ERV1 -14 849 1 21 0 0 0 chr10 60917619 60917640 -84671648 + AT_rich Low_complexity Low_complexity 1 21 0 37 39 0 0 chr10 60917848 60917899 -84671389 + AT_rich Low_complexity Low_complexity 1 51 0 198 0 0 0 chr10 60918010 60918032 -84671256 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 635 305 27 22 chr10 60918237 60918417 -84670871 + LTR16A LTR ERVL 221 404 -46 2038 141 0 0 chr10 60918417 60918723 -84670565 - AluSx SINE Alu -6 306 1 635 305 27 22 chr10 60918723 60918765 -84670523 + LTR16A LTR ERVL 404 444 -6 1023 283 62 32 chr10 60918771 60919209 -84670079 + HERV16 LTR ERVL 1 451 -4545 743 11 11 0 chr10 60919210 60919303 -84669985 + L1PA4 LINE L1 6061 6154 -1 728 301 82 7 chr10 60919304 60919596 -84669692 + HERV16 LTR ERVL 463 776 -4220 676 350 45 10 chr10 60919644 60920219 -84669069 + HERV16 LTR ERVL 908 1547 -3449 233 368 113 0 chr10 60920312 60920445 -84668843 + LTR16A LTR ERVL 128 275 -175 493 333 32 16 chr10 60922457 60922646 -84666642 + MIR SINE MIR 27 218 -44 23 33 0 0 chr10 60923654 60923684 -84665604 + AT_rich Low_complexity Low_complexity 1 30 0 2944 64 3 0 chr10 60924593 60924955 -84664333 - L1P3 LINE L1 -435 5719 5354 2701 70 6 0 chr10 60924955 60925310 -84663978 + L1PA7 LINE L1 5795 6151 -3 2944 64 3 0 chr10 60925310 60925321 -84663967 - L1P3 LINE L1 -800 5354 5345 229 213 118 79 chr10 60927212 60927339 -84661949 + MLT1J2 LTR MaLR 1 132 -318 26 50 0 0 chr10 60928793 60928833 -84660455 + AT_rich Low_complexity Low_complexity 1 40 0 3955 248 28 30 chr10 60929055 60930095 -84659193 + MER45B DNA AcHobo 3 1040 0 26 64 0 0 chr10 60932685 60932732 -84656556 + AT_rich Low_complexity Low_complexity 1 47 0 623 182 9 0 chr10 60932915 60933025 -84656263 - FLAM_C SINE Alu -32 111 1 1416 246 121 59 chr10 60934779 60935310 -84653978 - MLT1E2 LTR MaLR 0 624 39 508 246 16 93 chr10 60937496 60937679 -84651609 + MIR SINE MIR 84 252 -10 196 192 164 27 chr10 60937716 60937789 -84651499 + L2 LINE L2 2708 2790 -524 2281 178 64 43 chr10 60937822 60938306 -84650982 - MLT2B2 LTR ERVL -19 496 3 265 240 120 24 chr10 60938393 60938518 -84650770 - MER90 LTR ERV1 -18 596 460 299 385 12 12 chr10 60940156 60940325 -84648963 - MER5A DNA MER1_type 0 189 21 6450 144 35 32 chr10 60940702 60941916 -84647372 - Tigger3b DNA MER2_type -14 1217 1 1353 83 16 5 chr10 60943190 60943383 -84645905 + AluSc SINE Alu 98 292 -17 21 36 0 0 chr10 60943399 60943427 -84645861 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr10 60943577 60943606 -84645682 + AT_rich Low_complexity Low_complexity 1 29 0 21 57 0 0 chr10 60944435 60944470 -84644818 + AT_rich Low_complexity Low_complexity 1 35 0 273 98 0 0 chr10 60944491 60944532 -84644756 + (TG)n Simple_repeat Simple_repeat 2 42 0 1503 192 7 24 chr10 60944538 60944825 -84644463 - AluJo SINE Alu -30 282 1 935 183 137 0 chr10 60945780 60945977 -84643311 - MER58A DNA MER1_type 0 224 1 28 71 0 0 chr10 60946992 60947048 -84642240 + AT_rich Low_complexity Low_complexity 1 56 0 1131 200 97 54 chr10 60947833 60948203 -84641085 - MSTB1 LTR MaLR 0 396 8 1312 280 85 14 chr10 60948418 60948447 -84640841 - L1MC4a LINE L1 -1866 5942 5916 357 24 0 0 chr10 60948447 60948489 -84640799 + (TC)n Simple_repeat Simple_repeat 2 43 0 189 0 0 0 chr10 60948488 60948509 -84640779 + (TA)n Simple_repeat Simple_repeat 1 21 0 * 1312 280 85 14 chr10 60948489 60949069 -84640219 - L1MC4a LINE L1 -1892 5916 5311 697 220 0 0 chr10 60950453 60950585 -84638703 + FLAM_A SINE Alu 1 132 -1 251 178 6 6 chr10 60950798 60950861 -84638427 + Alu SINE Alu 1 39 -262 610 199 58 6 chr10 60951126 60951322 -84637966 - L1PA6 LINE L1 -81 6074 5865 1112 263 91 0 chr10 60952461 60952803 -84636485 - MLT1B LTR MaLR -3 387 15 4124 116 122 139 chr10 60953263 60954593 -84634695 - pTR5 LTR ERV1 -2 1600 6 2291 68 10 0 chr10 60954726 60955021 -84634267 + AluY SINE Alu 1 298 -13 304 328 112 8 chr10 60955672 60955806 -84633482 - L2 LINE L2 -5 3308 3161 454 268 28 39 chr10 60955889 60956068 -84633220 + MLT1H LTR MaLR 16 192 -357 489 363 85 27 chr10 60956477 60956736 -84632552 - L2 LINE L2 -356 2958 2685 24 77 0 0 chr10 60957352 60957404 -84631884 + AT_rich Low_complexity Low_complexity 1 52 0 315 285 0 47 chr10 60958857 60959029 -84630259 + C-rich Low_complexity Low_complexity 3 166 0 2139 112 3 3 chr10 60959819 60960114 -84629174 + AluSg SINE Alu 1 295 -15 2224 104 0 0 chr10 60960314 60960622 -84628666 + AluY SINE Alu 1 308 -3 198 118 0 0 chr10 60960691 60960725 -84628563 + (T)n Simple_repeat Simple_repeat 1 34 0 1018 140 117 17 chr10 60961156 60961335 -84627953 - MSTA LTR MaLR 0 428 232 207 0 0 0 chr10 60961577 60961600 -84627688 + (T)n Simple_repeat Simple_repeat 1 23 0 1888 193 28 28 chr10 60961762 60962178 -84627110 - L1MC3 LINE L1 -157 7628 7210 215 79 26 0 chr10 60962178 60962216 -84627072 + (GTTTG)n Simple_repeat Simple_repeat 2 40 0 1888 193 28 28 chr10 60962216 60962230 -84627058 - L1MC3 LINE L1 -574 7211 7198 * 4572 161 59 3 chr10 60962226 60962562 -84626726 - L1PB4 LINE L1 0 6156 5840 261 83 0 0 chr10 60962562 60962598 -84626690 + (TG)n Simple_repeat Simple_repeat 2 37 0 4572 161 59 3 chr10 60962598 60963425 -84625863 - L1PB4 LINE L1 -316 5840 4935 305 261 0 14 chr10 60963460 60963529 -84625759 - L1MC3 LINE L1 -630 7155 7088 228 86 0 0 chr10 60964427 60964462 -84624826 + (TG)n Simple_repeat Simple_repeat 1 35 0 187 363 29 20 chr10 60964495 60964597 -84624691 - L3 LINE CR1 -8 1569 1467 2239 67 0 3 chr10 60965055 60965375 -84623913 + AluY SINE Alu 1 319 0 720 301 46 59 chr10 60966136 60966628 -84622660 - MER115 DNA AcHobo -23 670 136 352 97 32 0 chr10 60966695 60966757 -84622531 + CT-rich Low_complexity Low_complexity 2 65 0 206 219 0 0 chr10 60966758 60966799 -84622489 + (TG)n Simple_repeat Simple_repeat 2 42 0 922 226 140 39 chr10 60966828 60967186 -84622102 + MSTD LTR MaLR 3 396 0 209 298 18 0 chr10 60967824 60967881 -84621407 - MIR SINE MIR -62 146 89 218 247 11 22 chr10 60968481 60968507 -84620781 + (TA)n Simple_repeat Simple_repeat 2 27 -62 7494 143 24 7 chr10 60968507 60969783 -84619505 - HSMAR2 DNA Mariner -1 1301 4 218 247 11 22 chr10 60969783 60969845 -84619443 + (TA)n Simple_repeat Simple_repeat 27 89 0 455 342 105 0 chr10 60969949 60970139 -84619149 + MIR SINE MIR 12 221 -41 391 269 39 0 chr10 60971222 60971326 -84617962 + MIR SINE MIR 82 189 -73 1042 230 64 58 chr10 60971338 60971681 -84617607 + MER2 DNA MER2_type 1 345 0 192 381 25 17 chr10 60971752 60971870 -84617418 - MIR SINE MIR -57 151 33 24 85 0 0 chr10 60972977 60973036 -84616252 + AT_rich Low_complexity Low_complexity 1 59 0 368 289 24 60 chr10 60973683 60973849 -84615439 - MLT1H LTR MaLR -18 531 378 430 277 34 8 chr10 60973990 60974109 -84615179 - MLT1H LTR MaLR -387 162 41 1512 156 35 57 chr10 60974569 60974851 -84614437 + AluJo SINE Alu 6 281 -31 1498 257 53 28 chr10 60976387 60976995 -84612293 - HAL1 LINE L1 0 2507 1885 23 33 0 0 chr10 60977355 60977385 -84611903 + AT_rich Low_complexity Low_complexity 1 30 0 265 263 94 41 chr10 60977787 60977958 -84611330 - HAL1 LINE L1 -1274 1233 1054 22 0 0 0 chr10 60977986 60978008 -84611280 + AT_rich Low_complexity Low_complexity 1 22 0 368 284 30 12 chr10 60978027 60978196 -84611092 + L1MC4 LINE L1 7734 7905 -137 268 167 0 0 chr10 60978197 60978245 -84611043 + L1MC4 LINE L1 7995 8042 0 345 271 85 34 chr10 60978849 60978967 -84610321 + L2 LINE L2 3149 3272 0 22 70 0 0 chr10 60979668 60979711 -84609577 + AT_rich Low_complexity Low_complexity 1 43 0 180 158 0 0 chr10 60981531 60981569 -84607719 + (TAA)n Simple_repeat Simple_repeat 2 39 0 21 0 0 0 chr10 60982209 60982230 -84607058 + AT_rich Low_complexity Low_complexity 1 21 0 1766 169 95 17 chr10 60982234 60982582 -84606706 - THE1C LTR MaLR 0 375 1 818 260 35 35 chr10 60982814 60983045 -84606243 - MIR SINE MIR -27 235 5 7583 31 0 0 chr10 60984496 60985830 -84603458 - L1PA4 LINE L1 -3 6152 4819 9496 37 2 1 chr10 60985830 60986992 -84602296 + L1PA4 LINE L1 3643 4805 -1341 610 340 0 20 chr10 60986992 60987189 -84602099 + LTR40a LTR ERVL 185 377 -142 1435 87 5 0 chr10 60987401 60987596 -84601692 + MER107 DNA MER1_type 1 196 -1 32 0 0 0 chr10 60987897 60987929 -84601359 + AT_rich Low_complexity Low_complexity 1 32 0 352 108 215 0 chr10 60988061 60988126 -84601162 + MADE1 DNA Mariner 1 79 -1 265 360 34 7 chr10 60988248 60988395 -84600893 - L2 LINE L2 -510 2804 2654 298 353 58 53 chr10 60988445 60988635 -84600653 - L2 LINE L2 -346 2968 2778 43 20 0 0 chr10 60988635 60988685 -84600603 + AT_rich Low_complexity Low_complexity 1 50 0 231 320 41 0 chr10 60988685 60988782 -84600506 - L2 LINE L2 -546 2768 2668 420 264 196 23 chr10 60988844 60989064 -84600224 - MER102b DNA MER1_type -51 290 33 21 36 0 0 chr10 60989407 60989435 -84599853 + AT_rich Low_complexity Low_complexity 1 28 0 514 184 64 24 chr10 60989500 60989625 -84599663 - LTR40a LTR ERVL -387 132 3 219 139 0 0 chr10 60989827 60989863 -84599425 + (TA)n Simple_repeat Simple_repeat 2 37 0 18655 198 35 12 chr10 60990814 60997249 -84592039 + L1PA8 LINE L1 1 6817 -6 262 246 29 14 chr10 60997608 60997677 -84591611 + LTR9 LTR ERV1 543 612 0 357 164 60 0 chr10 60997712 60997779 -84591509 + HUERS-P3 LTR ERV1 25 95 -7323 * 7765 189 23 19 chr10 60997773 60998335 -84590953 + HUERS-P3 LTR ERV1 244 803 -7795 5001 97 13 1 chr10 60998335 60999015 -84590273 - LTR12 LTR ERV1 0 688 1 7765 189 23 19 chr10 60999015 61001016 -84588272 + HUERS-P3 LTR ERV1 803 3284 -5314 520 196 0 0 chr10 61001009 61001101 -84588187 + HUERS-P3 LTR ERV1 4539 4630 -4289 * 4167 157 19 1 chr10 61001386 61002067 -84587221 + HUERS-P3 LTR ERV1 4884 5576 -3343 2622 176 5 5 chr10 61002053 61002490 -84586798 + HUERS-P3 LTR ERV1 6162 6598 -2321 * 192 125 0 0 chr10 61002505 61002537 -84586751 + (CA)n Simple_repeat Simple_repeat 2 33 0 45 34 0 0 chr10 61002583 61002642 -84586646 + AT_rich Low_complexity Low_complexity 1 59 0 1443 235 0 3 chr10 61002645 61002943 -84586345 + HUERS-P3 LTR ERV1 6616 6912 -2007 440 254 0 9 chr10 61002954 61003064 -84586224 + HUERS-P3 LTR ERV1 6874 6982 -1937 * 749 182 28 11 chr10 61003059 61003235 -84586053 + HUERS-P3 LTR ERV1 2384 2562 -2453 1258 204 10 9 chr10 61003522 61003805 -84585483 + HUERS-P3 LTR ERV1 6828 8919 0 237 183 33 33 chr10 61003805 61003865 -84585423 + LTR9 LTR ERV1 1 60 -552 939 158 6 6 chr10 61003897 61004055 -84585233 + MLT1D LTR MaLR 344 501 -4 189 147 0 0 chr10 61004161 61004195 -84585093 + (CA)n Simple_repeat Simple_repeat 2 35 0 31 26 0 0 chr10 61004262 61004300 -84584988 + AT_rich Low_complexity Low_complexity 1 38 0 868 188 62 24 chr10 61004821 61004892 -84584396 + MER20 DNA MER1_type 4 71 -148 459 0 0 0 chr10 61004892 61004943 -84584345 + (TG)n Simple_repeat Simple_repeat 1 51 0 868 188 62 24 chr10 61004943 61005079 -84584209 + MER20 DNA MER1_type 71 219 0 748 243 38 45 chr10 61005448 61005740 -84583548 + pTR5 LTR ERV1 741 1030 -1408 3958 130 58 5 chr10 61005816 61006469 -84582819 + LTR12 LTR ERV1 1 688 0 21 57 0 0 chr10 61008132 61008167 -84581121 + AT_rich Low_complexity Low_complexity 1 35 0 337 303 45 109 chr10 61008167 61008720 -84580568 + L2 LINE L2 2795 3309 -4 191 316 11 53 chr10 61008741 61008836 -84580452 + MIR SINE MIR 78 168 -94 2514 129 26 19 chr10 61008849 61009274 -84580014 - MSTA LTR MaLR 0 428 1 641 316 39 42 chr10 61011779 61012086 -84577202 + MLT1I LTR MaLR 55 360 -49 229 238 0 0 chr10 61012119 61012161 -84577127 + MLT1I LTR MaLR 362 403 -6 259 333 62 34 chr10 61012167 61012344 -84576944 + MIR SINE MIR 26 207 -55 589 315 145 45 chr10 61012888 61013393 -84575895 + MLT1H1 LTR MaLR 1 555 0 247 254 68 0 chr10 61013683 61013742 -84575546 - MER8 DNA MER2_type -1 238 176 * 2131 165 69 20 chr10 61013689 61014095 -84575193 + Tigger2a DNA MER2_type 8 433 -1 402 235 6 19 chr10 61015437 61015599 -84573689 + GA-rich Low_complexity Low_complexity 2 161 0 220 234 14 20 chr10 61015647 61015799 -84573489 + GA-rich Low_complexity Low_complexity 1 150 0 23 33 0 0 chr10 61016417 61016447 -84572841 + AT_rich Low_complexity Low_complexity 1 30 0 1918 138 0 16 chr10 61117268 61117572 -84471716 - AluSx SINE Alu -13 299 1 1077 204 32 14 chr10 61118136 61118357 -84470931 - MER83B-int LTR ERV1 -3037 1843 1619 794 122 14 54 chr10 61118389 61118536 -84470752 - MER83B-int LTR ERV1 -3256 1624 1484 502 265 82 29 chr10 61118577 61118747 -84470541 - MER83B-int LTR ERV1 -5733 598 420 1052 188 8 4 chr10 61118795 61119029 -84470259 - L1MA3 LINE L1 0 6305 6071 252 175 62 62 chr10 61119074 61119171 -84470117 - L1MB3 LINE L1 0 6183 6087 1922 172 8 40 chr10 61119178 61119579 -84469709 - L1MA4 LINE L1 -280 6020 5633 1427 155 31 78 chr10 61119714 61120036 -84469252 - LTR56 LTR ERV1 -138 307 1 1688 284 90 46 chr10 61120037 61121059 -84468229 + L2 LINE L2 2205 3270 -43 2488 45 3 3 chr10 61121059 61121370 -84467918 + AluY SINE Alu 1 311 0 1688 284 90 46 chr10 61121370 61121416 -84467872 + L2 LINE L2 3270 3313 0 23 33 0 0 chr10 61122627 61122657 -84466631 + AT_rich Low_complexity Low_complexity 1 30 0 632 204 0 31 chr10 61122712 61122874 -84466414 - L1MA10 LINE L1 -7 6327 6171 1681 275 58 21 chr10 61123252 61123907 -84465381 + L1M4 LINE L1 4025 4703 -1443 356 289 53 20 chr10 61124405 61124557 -84464731 + HAL1 LINE L1 2226 2382 -125 301 265 44 0 chr10 61124861 61124929 -84464359 + Tigger3b DNA MER2_type 1171 1241 0 553 286 117 15 chr10 61124971 61125177 -84464111 + MIR SINE MIR 36 262 0 979 198 6 0 chr10 61125862 61126039 -84463249 + Tigger1 DNA MER2_type 1 178 -2240 266 319 73 31 chr10 61126521 61126712 -84462576 + MIR SINE MIR 31 229 -33 351 287 33 83 chr10 61126977 61127158 -84462130 + L2 LINE L2 2411 2582 -732 285 230 90 20 chr10 61127209 61127309 -84461979 + LTR37B LTR ERV1 6 112 -356 769 231 44 91 chr10 61127310 61127608 -84461680 + MER67D LTR ERV1 1 284 -230 264 151 57 0 chr10 61127641 61127694 -84461594 + LTR37B LTR ERV1 178 233 -235 21 36 0 0 chr10 61127938 61127966 -84461322 + AT_rich Low_complexity Low_complexity 1 28 0 316 205 33 90 chr10 61128023 61128145 -84461143 - MER5C DNA MER1_type -2 322 208 274 287 102 0 chr10 61128171 61128279 -84461009 - MER5C DNA MER1_type -205 119 1 2054 164 5 8 chr10 61128534 61128901 -84460387 - MER47A DNA MER2_type 0 366 1 258 136 0 0 chr10 61129067 61129111 -84460177 + (TC)n Simple_repeat Simple_repeat 1 44 0 352 190 0 149 chr10 61129111 61129232 -84460056 + MER8 DNA MER2_type 1 103 -136 22 0 0 0 chr10 61129438 61129460 -84459828 + AT_rich Low_complexity Low_complexity 1 22 0 955 249 32 52 chr10 61130339 61130453 -84458835 - L1MB7 LINE L1 0 6184 6069 4768 81 25 29 chr10 61130453 61131144 -84458144 + LTR12 LTR ERV1 1 688 0 955 249 32 52 chr10 61131144 61131374 -84457914 - L1MB7 LINE L1 -115 6069 5847 502 221 32 0 chr10 61131576 61131671 -84457617 + MER82 DNA MER2_type 46 143 -510 2047 242 9 2 chr10 61132159 61132601 -84456687 + MER82 DNA MER2_type 200 644 -9 5715 194 26 13 chr10 61132701 61134509 -84454779 + L1MA10 LINE L1 4501 6333 -1 936 166 0 6 chr10 61134709 61134872 -84454416 - Tigger3(Golem) DNA MER2_type -87 2942 2781 725 253 0 19 chr10 61134856 61135010 -84454278 - Tigger3(Golem) DNA MER2_type -2877 152 2 * 2241 107 0 0 chr10 61135465 61135763 -84453525 - AluSc SINE Alu -11 298 1 223 289 144 21 chr10 61136563 61136660 -84452628 - MIR SINE MIR -153 109 1 3664 164 67 55 chr10 61136854 61137752 -84451536 + LTR35-int LTR ERV1 5260 6168 -430 358 167 76 97 chr10 61137827 61137971 -84451317 + LTR35-int LTR ERV1 5914 6054 -277 2314 164 85 4 chr10 61138338 61138726 -84450562 + LTR35 LTR ERV1 1 514 -104 315 0 0 0 chr10 61138726 61138761 -84450527 + (TC)n Simple_repeat Simple_repeat 1 35 0 2314 164 85 4 chr10 61138761 61138876 -84450412 + LTR35 LTR ERV1 514 618 0 811 296 140 63 chr10 61138890 61139417 -84449871 - MER21B LTR ERV1 -251 612 45 4649 86 6 0 chr10 61139555 61140186 -84449102 + L1PA7 LINE L1 5520 6154 0 874 287 73 50 chr10 61140192 61140656 -84448632 + ERVL LTR ERVL 1850 2324 -3440 3026 193 18 21 chr10 61140702 61141361 -84447927 - L1 LINE L1 -1980 4166 3510 753 214 16 6 chr10 61141439 61141621 -84447667 - L1 LINE L1 -3181 2965 2782 * 4085 157 51 8 chr10 61141610 61142637 -84446651 + L1M1 LINE L1 4505 5579 -726 912 221 86 22 chr10 61142746 61142968 -84446320 + MLT1A1 LTR MaLR 130 365 0 234 0 0 0 chr10 61143228 61143254 -84446034 + (A)n Simple_repeat Simple_repeat 1 26 0 261 358 109 15 chr10 61143843 61143980 -84445308 + MIR3 SINE MIR 58 207 -1 526 285 68 34 chr10 61144564 61144771 -84444517 + L2 LINE L2 2505 2718 -596 1579 140 24 107 chr10 61144771 61145107 -84444181 + AluYb8 SINE Alu 1 308 -10 1205 116 0 32 chr10 61145122 61145311 -84443977 + AluSg/x SINE Alu 125 307 -5 386 382 33 29 chr10 61145320 61145592 -84443696 + L2 LINE L2 2701 2973 -341 276 366 76 12 chr10 61147026 61147198 -84442090 - MIR SINE MIR -19 243 61 232 301 0 0 chr10 61148284 61148357 -84440931 + L1ME1 LINE L1 5998 6070 -96 848 204 22 49 chr10 61149180 61149405 -84439883 - MER20 DNA MER1_type 0 219 1 1978 201 31 0 chr10 61149770 61150184 -84439104 + MER95 LTR ERV 5 431 0 333 356 43 18 chr10 61150490 61150653 -84438635 + MIR3 SINE MIR 40 206 -2 1047 147 78 6 chr10 61151175 61151397 -84437891 - L1MB1 LINE L1 -27 6141 5907 2574 67 3 0 chr10 61152572 61152917 -84436371 + L1P LINE L1 4864 5209 -937 343 338 48 26 chr10 61152920 61153189 -84436099 - HAL1 LINE L1 -487 2020 1746 21 36 0 0 chr10 61154067 61154095 -84435193 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr10 61154261 61154289 -84434999 + AT_rich Low_complexity Low_complexity 1 28 0 217 210 0 32 chr10 61154380 61154442 -84434846 + (TAA)n Simple_repeat Simple_repeat 1 60 0 274 324 43 18 chr10 61154962 61155150 -84434138 - LTR16A LTR ERVL -8 442 198 1010 164 6 0 chr10 61155582 61155741 -84433547 + LTR8 LTR ERV1 282 441 -250 10627 155 20 32 chr10 61155741 61158308 -84430980 - HUERS-P3b LTR ERV1 -4776 2642 3 2003 131 83 22 chr10 61158310 61158821 -84430467 - LTR9 LTR ERV1 0 612 2 277 328 31 39 chr10 61158900 61159028 -84430260 - MER5A DNA MER1_type 0 189 63 353 278 0 33 chr10 61159122 61159212 -84430076 + MER5B DNA MER1_type 41 127 -51 288 111 0 0 chr10 61160076 61160121 -84429167 + (TG)n Simple_repeat Simple_repeat 2 46 0 244 325 100 8 chr10 61161707 61161827 -84427461 - L2 LINE L2 -15 3298 3168 403 180 47 18 chr10 61162352 61162453 -84426835 - L1MC/D LINE L1 -695 5489 5405 1050 254 179 0 chr10 61162485 61162776 -84426512 + MER76 LTR ERV 1 343 -345 1113 271 39 13 chr10 61162895 61163205 -84426083 + MLT1E2 LTR MaLR 307 624 -2 1602 278 61 77 chr10 61163245 61164214 -84425074 - L1MC4 LINE L1 -148 7894 6942 7757 128 28 37 chr10 61164525 61165867 -84423421 - Tigger1 DNA MER2_type -12 2406 1078 570 27 0 27 chr10 61166000 61166075 -84423213 - L1P1 LINE L1 -453 5702 5630 2021 37 0 0 chr10 61167112 61167356 -84421932 - L1PA5 LINE L1 0 6154 5911 328 277 12 0 chr10 61167754 61167837 -84421451 + MER82 DNA MER2_type 2 85 -568 360 303 41 16 chr10 61167954 61168076 -84421212 - MIR SINE MIR -99 163 39 920 260 10 0 chr10 61168133 61168337 -84420951 + MER82 DNA MER2_type 448 653 0 307 233 33 11 chr10 61168346 61168436 -84420852 + L1ME LINE L1 236 327 -5878 454 307 82 43 chr10 61168693 61168996 -84420292 + L1ME LINE L1 1656 1970 -4426 811 265 84 58 chr10 61169001 61169771 -84419517 + L1ME LINE L1 2159 2952 -3263 25 75 0 0 chr10 61170544 61170597 -84418691 + AT_rich Low_complexity Low_complexity 1 53 0 303 302 69 16 chr10 61170597 61170786 -84418502 - L1ME4a LINE L1 -213 5908 5710 351 316 131 48 chr10 61170837 61171249 -84418039 - L1ME4a LINE L1 -1340 4806 4361 660 256 75 16 chr10 61171432 61171686 -84417602 - L1ME1 LINE L1 -9 6157 5889 1146 272 87 23 chr10 61171706 61172133 -84417155 - LTR40b LTR ERVL -8 454 1 929 229 75 19 chr10 61172133 61172443 -84416845 - L1ME1 LINE L1 -282 5884 5557 789 294 76 35 chr10 61172647 61173187 -84416101 - HAL1 LINE L1 -406 2101 1540 27 0 0 0 chr10 61173710 61173737 -84415551 + AT_rich Low_complexity Low_complexity 1 27 0 23 0 0 0 chr10 61173858 61173881 -84415407 + AT_rich Low_complexity Low_complexity 1 23 0 32 26 0 0 chr10 61174041 61174080 -84415208 + AT_rich Low_complexity Low_complexity 1 39 0 21 0 0 0 chr10 61174437 61174458 -84414830 + AT_rich Low_complexity Low_complexity 1 21 0 440 339 77 4 chr10 61174786 61175019 -84414269 + MIR SINE MIR 8 257 -5 2110 86 3 77 chr10 61175522 61175859 -84413429 + AluSx SINE Alu 1 312 0 384 238 34 41 chr10 61176941 61177088 -84412200 - L1MA7 LINE L1 -3 6288 6143 238 291 38 38 chr10 61177304 61177383 -84411905 + MIR SINE MIR 11 89 -173 934 268 111 15 chr10 61177608 61178003 -84411285 - MER57B LTR ERV1 -1 433 1 2232 207 83 67 chr10 61178325 61178808 -84410480 - HUERS-P3b LTR ERV1 -1162 5101 4627 1135 145 0 21 chr10 61178808 61178994 -84410294 - L1PA10 LINE L1 -14 6154 5973 2232 207 83 67 chr10 61178994 61179786 -84409502 - HUERS-P3b LTR ERV1 -1636 4627 3644 211 106 21 43 chr10 61180483 61180530 -84408758 + (TA)n Simple_repeat Simple_repeat 1 46 0 302 272 12 0 chr10 61180539 61180620 -84408668 + L1MC4 LINE L1 6614 6695 -1347 246 32 0 0 chr10 61180622 61180653 -84408635 + (GA)n Simple_repeat Simple_repeat 2 32 0 186 43 0 0 chr10 61180664 61180687 -84408601 + (TATG)n Simple_repeat Simple_repeat 2 24 0 6831 60 9 0 chr10 61180688 61181560 -84407728 - L1PA7 LINE L1 -16 6138 5259 2782 95 0 0 chr10 61181561 61181951 -84407337 + L1PA7 LINE L1 4874 5263 -883 475 229 29 7 chr10 61181967 61182107 -84407181 - HUERS-P3b LTR ERV1 -1887 2993 2851 1026 193 33 14 chr10 61182132 61182345 -84406943 - HUERS-P3b LTR ERV1 -2160 2720 2504 1306 138 18 22 chr10 61182345 61182570 -84406718 + THE1C LTR MaLR 1 224 -151 1463 192 11 111 chr10 61182594 61183057 -84406231 - HUERS-P3b LTR ERV1 -3775 3643 3136 180 0 0 0 chr10 61183057 61183077 -84406211 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1463 192 11 111 chr10 61183077 61183253 -84406035 - HUERS-P3b LTR ERV1 -4282 3136 1805 23 54 0 0 chr10 61183437 61183474 -84405814 + AT_rich Low_complexity Low_complexity 1 37 0 301 324 37 29 chr10 61184637 61184773 -84404515 - MIR3 SINE MIR -57 151 15 1644 187 75 19 chr10 61185071 61185446 -84403842 + MSTD LTR MaLR 1 396 0 329 339 46 0 chr10 61186670 61186779 -84402509 + L2 LINE L2 3173 3286 -27 237 33 0 0 chr10 61186785 61186815 -84402473 + (TC)n Simple_repeat Simple_repeat 1 30 0 234 0 0 0 chr10 61186814 61186840 -84402448 + (CA)n Simple_repeat Simple_repeat 1 26 0 * 595 170 0 0 chr10 61187478 61187578 -84401710 + L1PB3 LINE L1 6023 6122 -32 1499 181 7 0 chr10 61187586 61187868 -84401420 - L1 LINE L1 -1214 4932 4649 701 292 96 3 chr10 61188049 61188350 -84400938 + L2 LINE L2 2976 3304 -9 350 213 32 2 chr10 61188578 61188710 -84400578 + MER58B DNA MER1_type 174 330 -11 747 362 21 15 chr10 61189689 61189872 -84399416 + LTR16C LTR ERVL 1 188 -303 1799 221 26 12 chr10 61189872 61190302 -84398986 - MER63B DNA MER1_type 0 436 1 747 362 21 15 chr10 61190302 61190452 -84398836 + LTR16C LTR ERVL 188 336 -155 322 351 22 0 chr10 61190569 61190703 -84398585 + HERVL LTR ERVL 1456 1592 -4062 594 41 0 0 chr10 61190770 61190843 -84398445 + (TCTA)n Simple_repeat Simple_repeat 2 74 0 9317 104 7 2 chr10 61190983 61192370 -84396918 - L1P3 LINE L1 -2475 3671 2279 306 0 0 0 chr10 61192379 61192413 -84396875 + (CAA)n Simple_repeat Simple_repeat 3 36 0 11760 85 5 5 chr10 61192413 61194261 -84395027 + L1P3 LINE L1 3694 5544 -610 237 368 0 105 chr10 61194409 61194446 -84394842 - MIR3 SINE MIR 0 208 169 2804 7 0 0 chr10 61194446 61194754 -84394534 - AluYa5 SINE Alu -3 308 1 237 368 0 105 chr10 61194754 61194887 -84394401 - MIR3 SINE MIR -39 169 56 21 71 0 0 chr10 61195213 61195255 -84394033 + AT_rich Low_complexity Low_complexity 1 42 0 21 36 0 0 chr10 61195478 61195506 -84393782 + AT_rich Low_complexity Low_complexity 1 28 0 2117 58 0 11 chr10 61195693 61195954 -84393334 + AluY SINE Alu 47 304 -7 1242 217 188 30 chr10 61196125 61196530 -84392758 - MLT2B2 LTR ERVL -46 469 1 259 318 110 29 chr10 61197525 61197698 -84391590 - MIR SINE MIR -12 250 64 237 349 64 9 chr10 61198096 61198205 -84391083 + L2 LINE L2 3121 3235 -37 6759 67 9 14 chr10 61198439 61199819 -84389469 - L1PA7 LINE L1 -13 6141 4760 2014 133 0 37 chr10 61200006 61200329 -84388959 + AluSq SINE Alu 1 311 -2 263 322 92 63 chr10 61200798 61201037 -84388251 + HAL1 LINE L1 534 779 -1728 254 293 38 47 chr10 61201349 61201455 -84387833 + MLT1J LTR MaLR 236 340 -171 216 0 0 0 chr10 61201455 61201479 -84387809 + (TAA)n Simple_repeat Simple_repeat 2 25 0 9276 195 25 13 chr10 61201786 61203594 -84385694 - L1M1 LINE L1 -5719 1846 17 600 330 46 43 chr10 61203810 61204072 -84385216 - L2 LINE L2 0 3313 3048 1864 162 19 30 chr10 61204072 61204437 -84384851 + THE1B LTR MaLR 4 364 0 600 330 46 43 chr10 61204437 61204544 -84384744 - L2 LINE L2 -265 3048 2943 261 0 0 0 chr10 61204641 61204670 -84384618 + (TG)n Simple_repeat Simple_repeat 2 30 0 3474 146 40 0 chr10 61204842 61205437 -84383851 - L1MA5 LINE L1 -302 5998 5380 345 101 61 0 chr10 61205440 61205539 -84383749 + (TA)n Simple_repeat Simple_repeat 1 105 0 3649 183 24 5 chr10 61205542 61206303 -84382985 - L1MA5 LINE L1 -762 5384 4610 849 159 35 0 chr10 61206303 61206470 -84382818 + L1MA5 LINE L1 6124 6299 -1 492 43 29 0 chr10 61207593 61207663 -84381625 + L1P4 LINE L1 5417 5488 -680 1253 230 49 3 chr10 61207779 61208066 -84381222 - LTR8 LTR ERV1 -391 300 1 8877 112 32 27 chr10 61208066 61209506 -84379782 + HUERS-P3 LTR ERV1 3073 4519 -2899 2326 204 13 20 chr10 61209508 61209968 -84379320 + HUERS-P3 LTR ERV1 6489 6945 -473 865 139 14 6 chr10 61209976 61210153 -84379135 + HUERS-P3 LTR ERV1 2056 2548 -2467 1191 132 0 61 chr10 61210309 61210521 -84378767 + HUERS-P3 LTR ERV1 8720 8918 -1 3288 154 73 14 chr10 61210521 61211099 -84378189 + LTR9 LTR ERV1 1 612 0 931 109 31 10 chr10 61211168 61211462 -84377826 + (TCTA)n Simple_repeat Simple_repeat 1 300 0 233 236 14 28 chr10 61211540 61211612 -84377676 + (TTTA)n Simple_repeat Simple_repeat 2 72 0 180 0 0 0 chr10 61211817 61211837 -84377451 + (A)n Simple_repeat Simple_repeat 1 20 0 383 279 12 0 chr10 61212287 61212373 -84376915 - MER58 DNA MER1_type -2333 87 1 651 225 126 16 chr10 61212380 61212562 -84376726 - MER58C DNA MER1_type -3 212 11 463 274 100 42 chr10 61212517 61212707 -84376581 + MER58C DNA MER1_type 12 212 -3 * 716 261 103 80 chr10 61212724 61213372 -84375916 - L1ME LINE L1 -5402 970 308 453 233 54 16 chr10 61213508 61213637 -84375651 - MER94 DNA DNA 0 134 1 24 53 0 0 chr10 61214099 61214137 -84375151 + AT_rich Low_complexity Low_complexity 1 38 0 371 304 182 23 chr10 61214219 61214433 -84374855 + MIR SINE MIR 15 262 0 27 0 0 0 chr10 61215036 61215063 -84374225 + AT_rich Low_complexity Low_complexity 1 27 0 1718 173 0 7 chr10 61215244 61215533 -84373755 + AluSx SINE Alu 3 289 -23 2478 69 3 0 chr10 61215958 61216264 -84373024 + AluY SINE Alu 1 307 -4 437 229 0 0 chr10 61216293 61216376 -84372912 + MLT1D LTR MaLR 13 95 -410 365 219 34 0 chr10 61216396 61216515 -84372773 - L1 LINE L1 -2732 3414 3292 * 819 190 33 58 chr10 61216496 61216738 -84372550 - L1M4 LINE L1 -815 5331 5096 1255 258 58 19 chr10 61216808 61217168 -84372120 - L1ME LINE L1 -5993 391 18 341 91 39 13 chr10 61217173 61217250 -84372038 + (TA)n Simple_repeat Simple_repeat 2 80 0 2831 129 9 0 chr10 61217251 61217684 -84371604 - L1PA16 LINE L1 -3 6163 5727 1259 306 140 73 chr10 61217830 61219109 -84370179 - L2 LINE L2 -1147 2167 804 421 271 60 27 chr10 61219111 61219306 -84369982 + MLT1I LTR MaLR 1 206 -244 2013 137 0 7 chr10 61219463 61219762 -84369526 - AluSq SINE Alu -16 297 1 371 239 11 11 chr10 61219833 61219925 -84369363 + MLT1I LTR MaLR 306 397 -12 939 278 27 18 chr10 61219937 61220275 -84369013 - L2 LINE L2 -2509 805 465 1304 86 5 16 chr10 61220875 61221062 -84368226 - THE1A LTR MaLR 0 355 171 515 195 25 0 chr10 61221062 61221180 -84368108 + L1 LINE L1 2930 3050 -3096 318 272 158 19 chr10 61221621 61221779 -84367509 - MIR SINE MIR -71 191 12 192 220 68 34 chr10 61221856 61221915 -84367373 + MER5A DNA MER1_type 128 188 -1 2142 114 7 0 chr10 61222217 61222515 -84366773 - AluSx SINE Alu -12 300 1 27 0 0 0 chr10 61223327 61223354 -84365934 + AT_rich Low_complexity Low_complexity 1 27 0 361 235 16 33 chr10 61223354 61223537 -84365751 + (TA)n Simple_repeat Simple_repeat 1 180 0 201 195 63 29 chr10 61224504 61224678 -84364610 + (TATAA)n Simple_repeat Simple_repeat 1 180 0 246 208 35 35 chr10 61224697 61224870 -84364418 + (TATAA)n Simple_repeat Simple_repeat 4 176 0 331 171 33 76 chr10 61224911 61225708 -84363580 + (TA)n Simple_repeat Simple_repeat 1 762 0 29 0 0 0 chr10 61225708 61225737 -84363551 + AT_rich Low_complexity Low_complexity 1 29 0 213 179 21 11 chr10 61225737 61225832 -84363456 + (TATAA)n Simple_repeat Simple_repeat 1 96 0 242 316 25 0 chr10 61226731 61226810 -84362478 + MLT1E2 LTR MaLR 1 81 -545 237 139 0 0 chr10 61226810 61226853 -84362435 + (CAAA)n Simple_repeat Simple_repeat 1 43 0 1407 213 96 105 chr10 61226854 61227398 -84361890 + MLT1E2 LTR MaLR 88 626 0 380 216 34 11 chr10 61227424 61227512 -84361776 + MIR SINE MIR 90 179 -83 34 42 0 0 chr10 61227915 61227963 -84361325 + AT_rich Low_complexity Low_complexity 1 48 0 261 310 209 0 chr10 61229217 61229375 -84359913 - MIR SINE MIR 0 262 72 498 281 21 141 chr10 61229473 61229660 -84359628 + MLT1H1 LTR MaLR 4 151 -435 1356 190 52 30 chr10 61229660 61229965 -84359323 + AluJo SINE Alu 1 312 0 498 281 21 141 chr10 61229965 61230078 -84359210 + MLT1H1 LTR MaLR 151 276 -310 10998 210 35 25 chr10 61230223 61235338 -84353950 + L1PBa LINE L1 57 5509 -1353 2418 63 3 0 chr10 61236378 61236681 -84352607 + AluY SINE Alu 1 304 -7 2340 73 0 0 chr10 61236691 61236993 -84352295 + AluY SINE Alu 1 302 -9 29 28 0 0 chr10 61237077 61237113 -84352175 + AT_rich Low_complexity Low_complexity 1 36 0 385 274 174 36 chr10 61237576 61237857 -84351431 + HAL1 LINE L1 976 1295 -1212 245 285 29 7 chr10 61238068 61238205 -84351083 + (TA)n Simple_repeat Simple_repeat 1 140 0 24 0 0 0 chr10 61238212 61238236 -84351052 + AT_rich Low_complexity Low_complexity 1 24 0 231 305 60 49 chr10 61238792 61239140 -84350148 - HAL1b LINE L1 -279 1069 718 28 48 0 0 chr10 61239262 61239304 -84349984 + AT_rich Low_complexity Low_complexity 1 42 0 22 0 0 0 chr10 61239469 61239491 -84349797 + AT_rich Low_complexity Low_complexity 1 22 0 6893 183 11 64 chr10 61239779 61241270 -84348018 + MER52A LTR ERV1 365 1755 0 6885 190 18 28 chr10 61241600 61242402 -84346886 - L1PA16 LINE L1 -2 6164 5355 2385 100 0 0 chr10 61242402 61242711 -84346577 - AluSc SINE Alu 0 309 1 6885 190 18 28 chr10 61242711 61244335 -84344953 - L1PA16 LINE L1 -811 5355 3759 22 56 0 0 chr10 61244422 61244458 -84344830 + AT_rich Low_complexity Low_complexity 1 36 0 796 265 63 70 chr10 61246580 61247101 -84342187 - MER51C LTR ERV1 -19 621 1 396 0 0 0 chr10 61247113 61247157 -84342131 + (TG)n Simple_repeat Simple_repeat 2 45 0 348 344 84 49 chr10 61247157 61247503 -84341785 - L1MC/D LINE L1 -2159 5649 5292 2175 91 10 0 chr10 61248021 61248319 -84340969 - AluSq SINE Alu -12 301 1 1064 250 24 14 chr10 61248569 61248857 -84340431 - L1ME1 LINE L1 -281 5885 5595 1146 154 3 1 chr10 61248872 61249064 -84340224 + L1MC1 LINE L1 6014 6192 -141 2716 193 77 22 chr10 61249064 61249833 -84339455 + MER21A LTR ERV1 1 925 -6 744 186 0 0 chr10 61249838 61249967 -84339321 + L1MC1 LINE L1 6187 6315 -18 2891 57 13 8 chr10 61250344 61250731 -84338557 - L1PA7 LINE L1 -1 6153 5765 810 294 44 21 chr10 61251335 61251834 -84337454 - MER90 LTR ERV1 -23 591 5 4388 252 100 33 chr10 61251856 61252814 -84336474 + L1MC4 LINE L1 5787 6679 -1363 186 43 0 0 chr10 61252814 61252837 -84336451 + (TAA)n Simple_repeat Simple_repeat 2 24 0 4388 252 100 33 chr10 61252837 61253770 -84335518 + L1MC4 LINE L1 6679 7805 -237 409 268 106 106 chr10 61253948 61254013 -84335275 - MIR SINE MIR 0 262 198 2005 142 0 0 chr10 61254013 61254309 -84334979 - AluSx SINE Alu -16 296 1 409 268 106 106 chr10 61254309 61254489 -84334799 - MIR SINE MIR -63 199 17 5073 145 35 10 chr10 61256276 61257157 -84332131 + MER4D LTR ERV1 1 903 0 44 0 0 0 chr10 61257246 61257290 -84331998 + AT_rich Low_complexity Low_complexity 1 44 0 490 138 75 0 chr10 61257384 61257478 -84331810 + L1MB3 LINE L1 6080 6180 -3 571 306 59 9 chr10 61257900 61258119 -84331169 + MIR SINE MIR 29 258 -4 306 316 35 0 chr10 61258109 61258223 -84331065 + MIR SINE MIR 144 261 -1 * 202 182 18 73 chr10 61258539 61258594 -84330694 - L2 LINE L2 0 3272 3221 * 264 263 10 136 chr10 61258591 61258742 -84330546 + MIR SINE MIR 33 155 -107 1962 175 51 3 chr10 61258742 61259113 -84330175 + MLT1B LTR MaLR 2 390 0 264 263 10 136 chr10 61259113 61259159 -84330129 + MIR SINE MIR 155 205 -57 378 0 0 0 chr10 61259964 61260006 -84329282 + (CA)n Simple_repeat Simple_repeat 1 42 0 1540 213 0 0 chr10 61260373 61260646 -84328642 - AluJo SINE Alu -39 273 1 2853 9 0 0 chr10 61262269 61262584 -84326704 - AluYb8 SINE Alu -3 315 1 270 0 0 0 chr10 61263996 61264026 -84325262 + (TA)n Simple_repeat Simple_repeat 2 31 0 662 238 129 0 chr10 61265197 61265399 -84323889 + L1ME3A LINE L1 5915 6142 -28 22 35 0 0 chr10 61265596 61265625 -84323663 + AT_rich Low_complexity Low_complexity 1 29 0 189 306 31 71 chr10 61265702 61265800 -84323488 + MIR SINE MIR 113 206 -56 228 232 18 0 chr10 61266685 61266741 -84322547 + CT-rich Low_complexity Low_complexity 2 58 0 182 154 231 0 chr10 61267505 61267544 -84321744 + L2 LINE L2 3266 3313 0 1003 201 70 0 chr10 61268547 61268791 -84320497 - LTR37B LTR ERV1 0 468 208 263 238 12 38 chr10 61268845 61268925 -84320363 - LTR37B LTR ERV1 -375 93 16 423 307 59 25 chr10 61268939 61269141 -84320147 - L1ME4a LINE L1 -72 6049 5841 184 282 0 56 chr10 61269164 61269235 -84320053 - MIR SINE MIR -86 176 110 5260 170 36 11 chr10 61269684 61270950 -84318338 - L1MA5 LINE L1 -5 6295 4999 24 53 0 0 chr10 61271005 61271043 -84318245 + AT_rich Low_complexity Low_complexity 1 38 0 665 78 26 9 chr10 61272721 61272836 -84316452 + (TCTA)n Simple_repeat Simple_repeat 2 118 0 543 228 86 12 chr10 61272844 61273006 -84316282 + MLT1E3 LTR MaLR 4 177 -447 241 254 90 45 chr10 61273128 61273262 -84316026 + MLT1E3 LTR MaLR 215 354 -272 268 228 33 0 chr10 61273402 61273494 -84315794 + GA-rich Low_complexity Low_complexity 2 96 0 2224 253 103 45 chr10 61273539 61275477 -84313811 + L1MC4 LINE L1 4063 6159 -7 373 340 17 8 chr10 61275766 61275989 -84313299 + GA-rich Low_complexity Low_complexity 1 224 0 222 37 0 0 chr10 61276167 61276194 -84313094 + (CA)n Simple_repeat Simple_repeat 2 28 0 39271 75 7 4 chr10 61276483 61282570 -84306718 - L1PA5 LINE L1 -5 6149 46 881 274 71 24 chr10 61284738 61285242 -84304046 - L1MC5 LINE L1 -106 7855 7328 444 283 117 14 chr10 61285315 61285460 -84303828 + MER21B LTR ERV1 12 171 -692 516 271 51 8 chr10 61285482 61285718 -84303570 - L1MC5 LINE L1 -789 7172 6927 1371 205 57 47 chr10 61285831 61286217 -84303071 + MLT1B LTR MaLR 1 390 0 190 321 0 0 chr10 61286445 61286498 -84302790 - L2 LINE L2 -4 3268 3216 23 33 0 0 chr10 61287643 61287673 -84301615 + AT_rich Low_complexity Low_complexity 1 30 0 181 366 12 0 chr10 61288122 61288204 -84301084 + MIR SINE MIR 58 140 -122 333 149 18 53 chr10 61288232 61288320 -84300968 + GA-rich Low_complexity Low_complexity 2 111 0 234 0 0 0 chr10 61288320 61288346 -84300942 + (GGAA)n Simple_repeat Simple_repeat 2 27 0 6745 132 12 12 chr10 61288811 61290150 -84299138 - L1MA2 LINE L1 -2 7721 6382 3486 160 13 8 chr10 61290126 61290758 -84298530 - L1MA2 LINE L1 -1823 5742 5108 * 274 229 0 0 chr10 61290770 61290818 -84298470 - AluJ/monomer SINE Alu -260 48 1 3773 228 23 8 chr10 61290819 61291749 -84297539 - L1MA2 LINE L1 -2574 4991 4048 2459 149 5 0 chr10 61291752 61292162 -84297126 - L1MA2 LINE L1 -5210 2355 1944 267 291 128 14 chr10 61392381 61392522 -84196766 + MIR SINE MIR 54 210 -52 591 125 52 0 chr10 61392653 61392749 -84196539 + L1MB8 LINE L1 6072 6172 -6 223 179 0 54 chr10 61392751 61392807 -84196481 + (CATA)n Simple_repeat Simple_repeat 2 54 0 2373 184 69 4 chr10 61394034 61394486 -84194802 + L1PB4 LINE L1 5669 6149 -7 341 197 51 8 chr10 61394486 61394603 -84194685 + (TA)n Simple_repeat Simple_repeat 1 122 0 1743 185 26 31 chr10 61394615 61394967 -84194321 - MLT2C1 LTR ERVL -47 350 1 910 266 42 31 chr10 61395195 61395481 -84193807 - MLT1C LTR MaLR -8 459 171 857 143 7 0 chr10 61395527 61395674 -84193614 - L1MA5 LINE L1 -18 6282 6135 3319 220 29 17 chr10 61395676 61397188 -84192100 - L1 LINE L1 -3265 3583 2053 197 234 9 93 chr10 61398009 61398116 -84191172 - MIR3 SINE MIR -2 206 109 356 325 165 5 chr10 61398133 61398345 -84190943 - MIR SINE MIR -12 250 5 213 231 0 0 chr10 61399015 61399054 -84190234 + (TATATG)n Simple_repeat Simple_repeat 6 44 0 269 229 0 62 chr10 61399058 61399154 -84190134 - L1MC4 LINE L1 -1339 6703 6614 225 319 0 0 chr10 61399182 61399276 -84190012 + L1MC4 LINE L1 6614 6707 -1335 * 259 294 24 0 chr10 61399230 61399315 -84189973 - L1MC4 LINE L1 -1339 6703 6617 302 263 28 28 chr10 61399350 61399529 -84189759 + (TA)n Simple_repeat Simple_repeat 1 179 0 293 339 18 18 chr10 61400365 61400474 -84188814 - MIR SINE MIR -139 123 15 191 35 0 35 chr10 61401078 61401107 -84188181 + (GAAA)n Simple_repeat Simple_repeat 2 29 0 2203 95 0 46 chr10 61401478 61401805 -84187483 + AluSx SINE Alu 1 312 0 1382 140 23 145 chr10 61403017 61403368 -84185920 + AluYb8 SINE Alu 1 308 0 200 111 22 0 chr10 61403616 61403661 -84185627 + (CAA)n Simple_repeat Simple_repeat 3 48 0 244 316 77 36 chr10 61404515 61404683 -84184605 - MIR SINE MIR -71 191 17 9240 220 36 8 chr10 61405294 61408368 -84180920 + L1MC1 LINE L1 2664 5827 -506 4377 249 6 28 chr10 61408460 61409807 -84179481 + L1 LINE L1 2118 3434 -2712 373 351 32 7 chr10 61410531 61410685 -84178603 + MIR SINE MIR 21 178 -84 5056 138 14 12 chr10 61412417 61413244 -84176044 + L1PA16 LINE L1 5334 6162 -4 2264 161 46 10 chr10 61414323 61414739 -84174549 - MSTB1 LTR MaLR 0 432 2 21 0 0 0 chr10 61417034 61417055 -84172233 + AT_rich Low_complexity Low_complexity 1 21 0 284 297 36 51 chr10 61417602 61417740 -84171548 - MIR SINE MIR -63 199 64 230 290 16 0 chr10 61418112 61418174 -84171114 - L2 LINE L2 0 3313 3251 696 192 0 23 chr10 61419031 61419161 -84170127 - L1PB4 LINE L1 -56 6100 5974 7053 52 7 0 chr10 61420704 61422013 -84167275 - L1PA5 LINE L1 -3 6151 4840 287 326 66 39 chr10 61422559 61422817 -84166471 - L2 LINE L2 -432 2882 2618 351 299 51 19 chr10 61422867 61423024 -84166264 - MIR SINE MIR -10 252 91 2636 236 109 35 chr10 61423164 61423938 -84165350 + MER109 Unknown Unknown 838 1698 -734 2008 70 59 0 chr10 61423938 61424210 -84165078 - AluY SINE Alu -8 303 16 2636 236 109 35 chr10 61424210 61424395 -84164893 + MER109 Unknown Unknown 1698 1868 -564 2301 89 0 13 chr10 61424739 61425053 -84164235 - AluSx SINE Alu 0 312 3 1855 160 63 0 chr10 61425321 61425671 -84163617 - MER93b LTR ERV1 -1 372 1 23 0 0 0 chr10 61426635 61426658 -84162630 + AT_rich Low_complexity Low_complexity 1 23 0 218 333 0 0 chr10 61427380 61427449 -84161839 + L2 LINE L2 2990 3058 -214 737 163 0 0 chr10 61427517 61427646 -84161642 - L1M4 LINE L1 -410 5774 5646 275 227 0 0 chr10 61427688 61427776 -84161512 + L1MC4 LINE L1 6616 6703 -1339 877 304 43 17 chr10 61427785 61428137 -84161151 - L1MEc LINE L1 -5638 758 398 1777 143 0 0 chr10 61428444 61428703 -84160585 + AluSq SINE Alu 3 261 -52 369 0 0 0 chr10 61428711 61428752 -84160536 + (TAAA)n Simple_repeat Simple_repeat 4 44 0 683 0 24 0 chr10 61428753 61428835 -84160453 + (TAAAA)n Simple_repeat Simple_repeat 3 86 0 713 360 109 36 chr10 61429175 61430040 -84159248 + L2 LINE L2 1967 2894 -420 995 269 164 13 chr10 61430507 61430982 -84158306 + MLT1H LTR MaLR 3 549 0 317 216 165 0 chr10 61430983 61431080 -84158208 - MIR SINE MIR -27 235 123 21 0 0 0 chr10 61431700 61431721 -84157567 + AT_rich Low_complexity Low_complexity 1 21 0 219 333 0 54 chr10 61432644 61432680 -84156608 - MIR SINE MIR -74 188 152 5094 121 22 5 chr10 61432680 61433051 -84156237 - L1PA15 LINE L1 -6 6159 5796 2302 81 0 3 chr10 61433051 61433347 -84155941 - AluY SINE Alu -16 295 1 5094 121 22 5 chr10 61433347 61434523 -84154765 - L1PA15 LINE L1 -369 5796 4561 219 333 0 54 chr10 61434523 61434597 -84154691 - MIR SINE MIR -110 152 84 261 274 14 0 chr10 61434761 61434834 -84154454 - L1ME2 LINE L1 -10 6154 6081 341 303 120 11 chr10 61434918 61435093 -84154195 - L1ME2 LINE L1 -77 6087 5894 6006 100 24 0 chr10 61435095 61435947 -84153341 - L1PA10 LINE L1 0 6168 5297 3739 27 0 0 chr10 61435947 61436394 -84152894 + L1P LINE L1 4810 5256 -890 337 192 81 153 chr10 61436494 61436718 -84152570 - LTR37B LTR ERV1 -226 242 38 1868 157 168 8 chr10 61436718 61437087 -84152201 - MSTA LTR MaLR 0 428 1 337 192 81 153 chr10 61437087 61437123 -84152165 - LTR37B LTR ERV1 -430 38 1 378 235 136 25 chr10 61437314 61437476 -84151812 + MIR SINE MIR 83 262 0 896 229 23 53 chr10 61437650 61437916 -84151372 + MER92A LTR ERV1 141 398 -14 195 215 323 0 chr10 61438359 61438424 -84150864 - L2 LINE L2 -4 3268 3183 554 264 193 52 chr10 61438773 61439141 -84150147 - MLT1K LTR MaLR -128 460 41 267 424 61 28 chr10 61439832 61440193 -84149095 - L2 LINE L2 -373 2941 2569 420 371 135 22 chr10 61440652 61441229 -84148059 + L2 LINE L2 2205 2846 -468 24 0 0 0 chr10 61441361 61441385 -84147903 + AT_rich Low_complexity Low_complexity 1 24 0 232 297 0 0 chr10 61441965 61442039 -84147249 - L2 LINE L2 -81 3232 3159 2073 224 31 9 chr10 61442045 61442482 -84146806 - MER82 DNA MER2_type 0 653 204 464 89 13 0 chr10 61442482 61442561 -84146727 + (TA)n Simple_repeat Simple_repeat 1 80 0 2073 224 31 9 chr10 61442561 61442578 -84146710 - MER82 DNA MER2_type -449 204 189 266 304 0 0 chr10 61442577 61442646 -84146642 - MER82 DNA MER2_type -583 70 2 * 329 256 11 11 chr10 61442937 61443027 -84146261 + L1MC4 LINE L1 6614 6703 -1339 24 0 0 0 chr10 61443218 61443242 -84146046 + AT_rich Low_complexity Low_complexity 1 24 0 24 0 0 0 chr10 61443321 61443345 -84145943 + AT_rich Low_complexity Low_complexity 1 24 0 209 286 18 0 chr10 61443430 61443486 -84145802 + MIR SINE MIR 36 92 -170 3181 181 42 17 chr10 61443590 61443686 -84145602 - MER67C LTR ERV1 -2 708 616 2120 102 3 88 chr10 61443686 61444028 -84145260 + AluSq SINE Alu 1 313 0 3181 181 42 17 chr10 61444028 61444622 -84144666 - MER67C LTR ERV1 -94 616 1 1997 187 38 75 chr10 61445082 61445619 -84143669 + LTR49 LTR ERV1 109 572 -23 22 0 0 0 chr10 61445810 61445832 -84143456 + AT_rich Low_complexity Low_complexity 1 22 0 31 58 0 0 chr10 61445950 61446002 -84143286 + AT_rich Low_complexity Low_complexity 1 52 0 1098 230 49 59 chr10 61446925 61447333 -84141955 - LTR37A LTR ERV1 -4 422 19 1139 206 38 59 chr10 61447938 61448306 -84140982 + MLT1A1 LTR MaLR 1 396 0 2056 130 14 0 chr10 61448414 61448707 -84140581 + AluSx SINE Alu 1 297 -15 500 180 0 4 chr10 61449066 61449170 -84140118 + L1MA7 LINE L1 5832 5933 -249 1294 153 0 0 chr10 61449298 61449488 -84139800 + AluSx SINE Alu 1 190 -122 1097 101 7 0 chr10 61449672 61449821 -84139467 - AluY SINE Alu -5 306 157 26 64 0 0 chr10 61449999 61450046 -84139242 + AT_rich Low_complexity Low_complexity 1 47 0 180 0 0 0 chr10 61450573 61450593 -84138695 + (TA)n Simple_repeat Simple_repeat 1 20 0 675 256 0 0 chr10 61451328 61451461 -84137827 + MLT1E1 LTR MaLR 1 133 -521 1744 199 18 23 chr10 61451461 61451853 -84137435 - MLT1B LTR MaLR 0 390 1 234 180 82 123 chr10 61451853 61451905 -84137383 + MLT1E1 LTR MaLR 176 229 -425 821 149 0 22 chr10 61451905 61452039 -84137249 + FLAM_C SINE Alu 3 133 0 234 180 82 123 chr10 61452039 61452108 -84137180 + MLT1E1 LTR MaLR 229 292 -362 584 244 87 67 chr10 61452159 61452458 -84136830 - L1MC4 LINE L1 -527 7515 7211 841 134 0 16 chr10 61452458 61452585 -84136703 - AluSp/q SINE Alu -19 294 170 1717 257 75 37 chr10 61452586 61453264 -84136024 - L1MC4 LINE L1 -822 7220 6517 417 296 74 22 chr10 61453265 61453400 -84135888 - MIR SINE MIR -118 144 3 22 0 0 0 chr10 61454731 61454753 -84134535 + AT_rich Low_complexity Low_complexity 1 22 0 6785 98 8 4 chr10 61455494 61460088 -84129200 + L1PA7 LINE L1 1492 6149 -5 3113 197 14 18 chr10 61460311 61461016 -84128272 + L1 LINE L1 3631 4332 -1814 5539 153 12 0 chr10 61461017 61462023 -84127265 + L1PA16 LINE L1 4932 6148 -18 2491 191 8 17 chr10 61462029 61462552 -84126736 + L1MC1 LINE L1 5816 6333 0 272 247 69 4 chr10 61462838 61462940 -84126348 + MIR SINE MIR 39 149 -63 2529 114 25 3 chr10 61464392 61464759 -84124529 - THE1C LTR MaLR 0 375 1 8770 124 43 85 chr10 61464759 61466408 -84122880 - THE1C-int LTR MaLR 0 1580 1 2537 110 19 11 chr10 61466408 61466780 -84122508 - THE1C LTR MaLR 0 375 1 512 317 72 5 chr10 61466820 61467028 -84122260 + MLT1J LTR MaLR 90 311 -200 35447 100 13 12 chr10 61467654 61473784 -84115504 + L1PA6 LINE L1 11 6141 -13 328 301 49 0 chr10 61474285 61474408 -84114880 - MIR SINE MIR -61 201 73 274 122 0 0 chr10 61474433 61474474 -84114814 + LTR29 LTR ERV1 1 41 -581 3260 122 26 20 chr10 61474515 61475054 -84114234 + MER41B LTR ERV1 1 542 -93 11318 153 4 4 chr10 61475157 61477116 -84112172 - L1P LINE L1 -1102 5044 3086 726 251 6 6 chr10 61477107 61477286 -84112002 - L1P3 LINE L1 -5694 181 3 * 1369 256 28 26 chr10 61477290 61477791 -84111497 - L1ME2 LINE L1 -263 6399 5898 324 248 0 38 chr10 61477794 61477927 -84111361 - L1ME2 LINE L1 -830 5814 5687 250 114 113 4 chr10 61477921 61478005 -84111283 - L1MB4 LINE L1 0 6180 6072 * 2407 210 68 6 chr10 61477992 61478787 -84110501 - L1ME2 LINE L1 -4343 2303 1182 3573 216 31 31 chr10 61478789 61479677 -84109611 + L1MB4 LINE L1 5292 6179 -1 1293 201 27 53 chr10 61479696 61480070 -84109218 - L1ME2 LINE L1 -5359 1183 820 305 226 26 128 chr10 61480171 61480414 -84108874 - L1ME2 LINE L1 -5709 937 491 1316 216 7 15 chr10 61480430 61480699 -84108589 + AluJo SINE Alu 29 295 -17 426 298 53 60 chr10 61480894 61481159 -84108129 - L1ME2 LINE L1 -6278 264 2 23 0 0 0 chr10 61481296 61481319 -84107969 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr10 61481341 61481370 -84107918 + AT_rich Low_complexity Low_complexity 1 29 0 6810 191 18 23 chr10 61482569 61484173 -84105115 + L1PA15 LINE L1 3322 4986 -1160 1074 97 0 0 chr10 61484165 61484310 -84104978 + L1PB1 LINE L1 5521 5665 -486 * 803 103 8 0 chr10 61484305 61484420 -84104868 - L1PB1 LINE L1 -243 5908 5790 * 189 0 0 0 chr10 61484420 61484441 -84104847 + (CA)n Simple_repeat Simple_repeat 2 22 0 288 224 0 0 chr10 61484451 61484518 -84104770 + (TA)n Simple_repeat Simple_repeat 2 68 0 1689 112 12 0 chr10 61484518 61484768 -84104520 + L1PB1 LINE L1 5898 6150 -1 22 0 0 0 chr10 61484769 61484791 -84104497 + AT_rich Low_complexity Low_complexity 1 22 0 5133 138 22 7 chr10 61484803 61485968 -84103320 + L1PA15 LINE L1 4980 6158 -7 353 332 53 43 chr10 61486004 61486191 -84103097 - MIR3 SINE MIR -4 204 16 209 230 81 58 chr10 61487170 61487257 -84102031 - MIR SINE MIR -99 163 75 23 68 0 0 chr10 61487304 61487348 -84101940 + AT_rich Low_complexity Low_complexity 1 44 0 280 311 111 0 chr10 61487886 61488021 -84101267 - MER46C DNA MER2_type -187 151 2 448 224 102 20 chr10 61488021 61488168 -84101120 + L2 LINE L2 3153 3311 -2 2172 82 20 0 chr10 61488186 61488489 -84100799 + L1PA13 LINE L1 5852 6160 -3 2203 115 0 25 chr10 61490641 61490962 -84098326 + AluSq SINE Alu 1 313 0 225 0 0 0 chr10 61490963 61490988 -84098300 + (CCA)n Simple_repeat Simple_repeat 1 25 0 22 35 0 0 chr10 61492116 61492145 -84097143 + AT_rich Low_complexity Low_complexity 1 29 0 586 275 140 53 chr10 61493136 61493492 -84095796 - L2 LINE L2 -1469 1845 1459 243 268 98 12 chr10 61493591 61493673 -84095615 - L2 LINE L2 0 3313 3225 2003 137 17 0 chr10 61495107 61495400 -84093888 + AluSx SINE Alu 1 298 -14 278 338 45 0 chr10 61495479 61495646 -84093642 - MIR SINE MIR -65 143 19 21 71 0 0 chr10 61496483 61496525 -84092763 + AT_rich Low_complexity Low_complexity 1 42 0 311 126 11 126 chr10 61498196 61498283 -84091005 - L1MA9 LINE L1 -184 6128 6052 2316 133 22 0 chr10 61498311 61498678 -84090610 + THE1C LTR MaLR 1 375 0 2701 97 8 11 chr10 61498678 61499059 -84090229 + THE1C-int LTR MaLR 1 380 -1200 1156 92 92 31 chr10 61499031 61499226 -84090062 + THE1C-int LTR MaLR 71 277 -1303 * 2533 107 3 18 chr10 61499228 61499613 -84089675 + THE1C-int LTR MaLR 1202 1580 0 2535 97 24 16 chr10 61499613 61499985 -84089303 + THE1C LTR MaLR 1 375 0 265 229 4 0 chr10 61499985 61500050 -84089238 - L1MC/D LINE L1 -552 5782 5721 22 70 0 0 chr10 61500981 61501024 -84088264 + AT_rich Low_complexity Low_complexity 1 43 0 1769 203 11 24 chr10 61501257 61501636 -84087652 + MLT1A2 LTR MaLR 1 374 0 621 284 6 12 chr10 61502757 61502926 -84086362 + MIR SINE MIR 1 168 -94 510 306 24 60 chr10 61503290 61503673 -84085615 + Tigger4(Zombi) DNA MER2_type 537 905 -1826 1644 104 32 8 chr10 61503720 61503971 -84085317 + MLT2A1 LTR ERVL 1 257 -187 7234 46 15 1 chr10 61503971 61504901 -84084387 - L1P LINE L1 -947 5199 4257 868 269 31 66 chr10 61506190 61506643 -84082645 - LTR68 LTR ERV1 -303 437 1 491 91 0 0 chr10 61508124 61508190 -84081098 - AluS SINE Alu -247 66 1 924 209 193 35 chr10 61508405 61508891 -84080397 - LTR18B LTR ERVL -13 601 1 561 198 0 0 chr10 61509075 61509166 -84080122 - HERVL18 LTR ERVL -833 5214 5124 418 102 0 0 chr10 61509157 61509216 -84080072 - HERVL18 LTR ERVL -1595 4452 4394 * 6577 140 21 13 chr10 61509217 61510611 -84078677 - HERVL18 LTR ERVL -2467 3580 2119 669 107 19 10 chr10 61510610 61510713 -84078575 - HERVL18 LTR ERVL -4237 1810 1707 * 1484 158 0 0 chr10 61510717 61510951 -84078337 + HERVL18 LTR ERVL 1 234 -5813 407 210 82 29 chr10 61511052 61511258 -84078030 + LTR18A LTR ERVL 285 357 0 195 372 22 29 chr10 61511424 61511561 -84077727 - L2 LINE L2 -188 3084 2949 559 90 13 0 chr10 61511616 61511694 -84077594 + MADE1 DNA Mariner 2 80 0 2037 148 0 0 chr10 61511878 61512168 -84077120 + AluSx SINE Alu 6 295 -17 186 300 30 60 chr10 61512252 61512352 -84076936 + L2 LINE L2 3202 3298 -15 1530 226 84 7 chr10 61512518 61512957 -84076331 + LTR65 LTR ERV1 177 649 -20 2828 123 15 31 chr10 61513155 61513634 -84075654 + L1PA16 LINE L1 5696 6166 0 343 235 25 0 chr10 61513818 61513899 -84075389 + L2 LINE L2 3221 3303 -10 405 0 0 0 chr10 61513907 61513952 -84075336 + (CA)n Simple_repeat Simple_repeat 1 45 0 216 213 0 82 chr10 61516758 61516819 -84072469 + L2 LINE L2 3258 3313 0 211 358 21 21 chr10 61516798 61516893 -84072395 - MIR SINE MIR -140 122 28 * 200 176 0 39 chr10 61517023 61517074 -84072214 + A-rich Low_complexity Low_complexity 2 50 0 22 35 0 0 chr10 61517655 61517684 -84071604 + AT_rich Low_complexity Low_complexity 1 29 0 748 249 80 48 chr10 61518222 61518471 -84070817 + MIR SINE MIR 6 262 0 3450 179 116 17 chr10 61518670 61519420 -84069868 + LTR1B LTR ERV1 3 826 0 25 51 0 0 chr10 61519492 61519531 -84069757 + AT_rich Low_complexity Low_complexity 1 39 0 679 149 0 33 chr10 61519779 61519900 -84069388 - FLAM_C SINE Alu -6 137 21 1536 169 0 86 chr10 61521574 61521912 -84067376 + MSTB1 LTR MaLR 1 309 -123 800 106 0 0 chr10 61521943 61522047 -84067241 - FLAM_C SINE Alu -21 122 19 701 127 18 0 chr10 61522245 61522355 -84066933 + MSTB1 LTR MaLR 321 432 0 336 146 0 0 chr10 61522391 61522446 -84066842 - MLT2B1 LTR ERVL -2 518 464 263 137 0 20 chr10 61522474 61522525 -84066763 + (TCTA)n Simple_repeat Simple_repeat 4 53 0 222 118 0 0 chr10 61522609 61522643 -84066645 + (TA)n Simple_repeat Simple_repeat 2 35 0 775 235 45 36 chr10 61522704 61522925 -84066363 - MLT1D LTR MaLR -273 232 10 395 284 53 18 chr10 61522939 61523164 -84066124 + L1ME1 LINE L1 1197 1607 -4997 1561 280 213 12 chr10 61523373 61524286 -84065002 + L2 LINE L2 2191 3309 -4 5381 251 93 25 chr10 61524303 61527351 -84061937 + L1ME1 LINE L1 1695 4888 -1538 1920 226 65 42 chr10 61527349 61527916 -84061372 + L1ME1 LINE L1 5676 6255 -191 * 318 177 0 104 chr10 61527956 61528052 -84061236 + L1MA10 LINE L1 6249 6334 0 204 97 0 0 chr10 61528938 61528969 -84060319 + (TG)n Simple_repeat Simple_repeat 2 32 0 721 181 24 0 chr10 61530275 61530402 -84058886 - FRAM SINE Alu -49 127 1 323 145 35 55 chr10 61530607 61530752 -84058536 + (TTATA)n Simple_repeat Simple_repeat 5 146 0 668 299 32 0 chr10 61530760 61530947 -84058341 - MIR SINE MIR 0 262 70 4222 154 14 10 chr10 61530951 61531659 -84057629 - MER50 LTR ERV1 -23 711 1 209 268 161 0 chr10 61531663 61531719 -84057569 - MIR SINE MIR -196 66 2 708 148 102 8 chr10 61531763 61531891 -84057397 - LTR9 LTR ERV1 0 612 473 23645 151 111 104 chr10 61532007 61538655 -84050633 - HUERS-P3b LTR ERV1 -473 6945 266 748 94 19 0 chr10 61538659 61538765 -84050523 - HUERS-P3b LTR ERV1 -8808 111 4 3401 171 48 10 chr10 61538768 61539358 -84049930 - LTR9 LTR ERV1 0 612 1 2549 162 102 2 chr10 61539785 61540284 -84049004 - LTR29 LTR ERV1 -11 611 63 802 199 16 142 chr10 61540331 61540642 -84048646 + LTR60 LTR ERV1 14 285 -301 * 1122 234 44 10 chr10 61540636 61540931 -84048357 + LTR60 LTR ERV1 229 533 -53 1346 137 0 0 chr10 61541043 61541257 -84048031 + AluSq SINE Alu 101 314 0 651 289 59 51 chr10 61543180 61543216 -84046072 + MIR SINE MIR 1 35 -227 1272 120 101 0 chr10 61543216 61543425 -84045863 + MER30 DNA MER1_type 1 230 0 651 289 59 51 chr10 61543425 61543644 -84045644 + MIR SINE MIR 35 258 -4 236 309 99 0 chr10 61543796 61543877 -84045411 + L2 LINE L2 3147 3235 -37 2146 98 0 0 chr10 61545440 61545717 -84043571 + AluY SINE Alu 18 294 -17 530 248 54 20 chr10 61546023 61546172 -84043116 - MIR SINE MIR -20 242 89 1873 255 71 25 chr10 61546586 61547675 -84041613 + L1M4 LINE L1 1446 2744 -4081 1124 154 150 42 chr10 61547672 61547958 -84041330 + L1PA16 LINE L1 5849 6165 0 * 1411 249 75 12 chr10 61547983 61548489 -84040799 + L1M4 LINE L1 2700 3237 -3407 295 323 62 0 chr10 61548555 61548651 -84040637 + MIR SINE MIR 14 115 -147 244 259 0 0 chr10 61549080 61549138 -84040150 + (CA)n Simple_repeat Simple_repeat 2 59 0 1988 131 0 33 chr10 61550158 61550463 -84038825 - AluSc SINE Alu -14 295 1 334 326 98 30 chr10 61550616 61550748 -84038540 - MIR3 SINE MIR -27 181 41 1431 211 48 12 chr10 61551213 61551544 -84037744 + MLT1A1 LTR MaLR 10 352 -13 580 333 56 5 chr10 61551556 61551769 -84037519 - MIR SINE MIR -26 236 13 511 339 33 16 chr10 61552488 61552671 -84036617 + LTR33 LTR ERVL 12 197 -324 610 292 26 5 chr10 61552741 61552936 -84036352 + LTR33 LTR ERVL 315 513 -8 652 143 37 8 chr10 61553861 61554008 -84035280 + L1M3e LINE L1 2025 2174 -4853 706 216 42 42 chr10 61554739 61554929 -84034359 + L1MA9 LINE L1 5843 6032 -280 400 193 124 83 chr10 61555406 61555551 -84033737 - MLT1G LTR MaLR -258 332 182 512 252 9 0 chr10 61555699 61555814 -84033474 - MER97a DNA MER1_type? -715 179 64 194 208 83 0 chr10 61556586 61556634 -84032654 - MIR SINE MIR -54 208 157 386 199 61 76 chr10 61557057 61557188 -84032100 + MER76 LTR ERV 297 425 -263 2873 132 39 20 chr10 61557192 61557344 -84031944 - L1MA9 LINE L1 -367 5945 5797 294 29 0 0 chr10 61557344 61557379 -84031909 + (TG)n Simple_repeat Simple_repeat 2 36 0 2873 132 39 20 chr10 61557379 61557735 -84031553 - L1MA9 LINE L1 -515 5797 5427 602 241 76 42 chr10 61557835 61558072 -84031216 + MER2 DNA MER2_type 100 344 -1 596 289 15 0 chr10 61558136 61558271 -84031017 + MIR SINE MIR 20 156 -106 2091 86 179 162 chr10 61558275 61558867 -84030421 - LTR12 LTR ERV1 -132 2032 57 257 231 0 0 chr10 61558867 61558919 -84030369 - LTR30 LTR ERV1 -670 52 1 31898 80 2 6 chr10 61558919 61563151 -84026137 - HERV9 LTR ERV1 0 8399 4187 312 292 0 0 chr10 61563321 61563393 -84025895 - MIR SINE MIR -3 259 188 403 247 21 0 chr10 61563406 61563503 -84025785 - MIR SINE MIR 0 262 164 5664 78 68 31 chr10 61563504 61564301 -84024987 + LTR12 LTR ERV1 1 826 0 23158 95 3 5 chr10 61564314 61567470 -84021818 + HERV9 LTR ERV1 40 3188 -5211 409 299 68 47 chr10 61567675 61568116 -84021172 - L1M3a LINE L1 -5175 780 192 305 357 51 19 chr10 61568119 61568276 -84021012 + L3 LINE CR1 939 1100 -477 11482 115 18 11 chr10 61568399 61570223 -84019065 + L1PA8A LINE L1 3454 5263 -868 2179 113 3 3 chr10 61570223 61570515 -84018773 + AluSq SINE Alu 1 292 -21 11482 115 18 11 chr10 61570515 61570580 -84018708 + L1PA8A LINE L1 5263 5326 -805 192 40 0 0 chr10 61570580 61570605 -84018683 + (CA)n Simple_repeat Simple_repeat 2 26 0 11482 115 18 11 chr10 61570605 61571434 -84017854 + L1PA8A LINE L1 5326 6128 -3 23 54 0 0 chr10 61572053 61572090 -84017198 + AT_rich Low_complexity Low_complexity 1 37 0 961 285 30 26 chr10 61572536 61572806 -84016482 + L2 LINE L2 1106 1376 -1938 301 327 26 39 chr10 61572819 61572975 -84016313 + L2 LINE L2 1518 1671 -1643 276 321 125 58 chr10 61573039 61573742 -84015546 + L1MEc LINE L1 37 786 -5610 1562 180 55 38 chr10 61573821 61574110 -84015178 + AluJo SINE Alu 1 294 -18 360 59 0 0 chr10 61574112 61574163 -84015125 + (TG)n Simple_repeat Simple_repeat 1 51 0 267 141 70 4 chr10 61574184 61574432 -84014856 + (TA)n Simple_repeat Simple_repeat 1 264 0 360 194 0 68 chr10 61574432 61574535 -84014753 - L1MC4 LINE L1 -1333 6709 6614 180 0 0 0 chr10 61574535 61574555 -84014733 + (TA)n Simple_repeat Simple_repeat 2 21 0 229 302 0 62 chr10 61574594 61574690 -84014598 - L1ME LINE L1 -525 5639 5550 856 159 28 28 chr10 61574690 61574866 -84014422 - FRAM SINE Alu 0 176 1 259 279 59 7 chr10 61574958 61575094 -84014194 - L1ME LINE L1 -2336 5472 5330 399 315 87 17 chr10 61575332 61575560 -84013728 + MIR SINE MIR 3 256 -6 338 270 113 19 chr10 61576850 61577009 -84012279 + L1ME3A LINE L1 5477 5650 -520 1113 243 104 18 chr10 61577024 61577407 -84011881 + L1ME3A LINE L1 5706 6121 -49 668 205 26 26 chr10 61578611 61578762 -84010526 - FRAM SINE Alu -15 151 1 289 370 107 26 chr10 61578828 61579295 -84009993 - L2 LINE L2 0 3313 2809 212 206 59 15 chr10 61579967 61580035 -84009253 + (CAGAGA)n Simple_repeat Simple_repeat 2 72 0 204 221 35 12 chr10 61580868 61580954 -84008334 + (TA)n Simple_repeat Simple_repeat 1 88 0 278 326 111 6 chr10 61581647 61581819 -84007469 + MIR SINE MIR 2 191 -71 1516 168 31 88 chr10 61582893 61583244 -84006044 + MLT1B LTR MaLR 1 331 -59 1449 115 16 32 chr10 61583344 61583444 -84005844 + L1MA9 LINE L1 6061 6161 -151 2279 164 15 0 chr10 61583444 61583841 -84005447 + MER57A LTR ERV1 1 403 0 1449 115 16 32 chr10 61583841 61583993 -84005295 + L1MA9 LINE L1 6161 6309 -3 625 292 43 17 chr10 61583998 61584231 -84005057 + MER76 LTR ERV 416 654 -34 190 306 58 93 chr10 61584730 61585106 -84004182 - L2 LINE L2 -1665 1649 1287 218 281 82 68 chr10 61585392 61585538 -84003750 + L2 LINE L2 3113 3260 -12 392 358 124 47 chr10 61586307 61586735 -84002553 - L2 LINE L2 -1 3271 2811 450 317 101 8 chr10 61586804 61587072 -84002216 + L3 LINE CR1 1177 1469 -108 254 281 109 62 chr10 61588209 61588337 -84000951 - MER5A DNA MER1_type -6 183 50 268 275 81 27 chr10 61588752 61588772 -84000516 - L1MA10 LINE L1 -3 6331 6312 898 235 110 4 chr10 61588772 61589036 -84000252 - L1ME1 LINE L1 -12 6154 5863 347 92 0 98 chr10 61589036 61589121 -84000167 - MLT2D LTR ERVL 0 520 440 255 232 0 0 chr10 61589121 61589203 -84000085 + (TA)n Simple_repeat Simple_repeat 1 82 0 702 264 31 0 chr10 61589203 61589362 -83999926 - MLT2D LTR ERVL -41 373 210 453 252 26 52 chr10 61589366 61589521 -83999767 + L1ME1 LINE L1 5954 6104 -62 640 237 16 42 chr10 61589522 61589644 -83999644 - MLT2D LTR ERVL -227 187 70 2010 149 3 0 chr10 61589644 61589939 -83999349 + AluSx SINE Alu 1 296 -16 640 237 16 42 chr10 61589939 61590006 -83999282 - MLT2D LTR ERVL -344 70 3 1159 217 75 61 chr10 61590008 61590922 -83998366 - L1ME1 LINE L1 -299 5867 4911 2189 153 53 60 chr10 61590931 61591316 -83997972 - L1PA15 LINE L1 0 6165 5782 1735 86 61 113 chr10 61591316 61591643 -83997645 - AluSx SINE Alu -2 310 1 2189 153 53 60 chr10 61591643 61591708 -83997580 - L1PA15 LINE L1 -383 5782 5718 989 227 13 0 chr10 61591714 61591952 -83997336 - L1ME1 LINE L1 -1231 4915 4675 273 57 0 0 chr10 61593540 61593575 -83995713 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 228 278 33 53 chr10 61594778 61594929 -83994359 - HAL1 LINE L1 -54 2453 2306 21 57 0 0 chr10 61594962 61594997 -83994291 + AT_rich Low_complexity Low_complexity 1 35 0 231 271 0 47 chr10 61595162 61595269 -83994019 - HAL1b LINE L1 -501 847 746 731 199 99 0 chr10 61595615 61595786 -83993502 + MER5A DNA MER1_type 1 188 -1 386 183 25 7 chr10 61596057 61596162 -83993126 + MER63 DNA MER1_type 722 1685 -3 263 180 98 0 chr10 61596431 61596492 -83992796 + MER106A DNA MER1_type 113 179 -57 722 217 26 1 chr10 61596613 61596889 -83992399 - MLT1I LTR MaLR -5 404 91 523 371 14 0 chr10 61597110 61597323 -83991965 + L3 LINE CR1 1360 1575 -2 2075 171 56 30 chr10 61598149 61598666 -83990622 + MLT2A2 LTR ERVL 1 554 0 685 259 20 15 chr10 61599944 61600141 -83989147 + MIR SINE MIR 44 241 -21 581 297 42 10 chr10 61600281 61600473 -83988815 + MIR SINE MIR 65 262 0 546 313 71 0 chr10 61600724 61600922 -83988366 - MER58A DNA MER1_type -1 223 12 22 103 0 0 chr10 61601320 61601398 -83987890 + AT_rich Low_complexity Low_complexity 1 78 0 375 336 92 51 chr10 61601976 61602387 -83986901 + L2 LINE L2 2864 3291 -22 214 140 20 20 chr10 61602401 61602451 -83986837 + GA-rich Low_complexity Low_complexity 4 53 0 1727 179 10 0 chr10 61602986 61603288 -83986000 + AluSx SINE Alu 3 307 -5 200 322 35 35 chr10 61604395 61604482 -83984806 + MIR SINE MIR 106 192 -70 241 237 0 17 chr10 61606119 61606178 -83983110 - LTR33A LTR ERVL -2 521 464 11777 89 6 1 chr10 61606201 61608674 -83980614 + L1PA7 LINE L1 3655 6151 -3 2407 77 0 0 chr10 61609830 61610128 -83979160 + AluY SINE Alu 1 298 -13 2491 134 28 23 chr10 61611222 61611417 -83977871 - Tigger2a DNA MER2_type -2274 434 241 2025 135 18 9 chr10 61611417 61611751 -83977537 + MER1B DNA MER1_type 1 337 0 2491 134 28 23 chr10 61611751 61611987 -83977301 - Tigger2a DNA MER2_type -2467 241 1 217 320 90 88 chr10 61612190 61612680 -83976608 + L2 LINE L2 2804 3294 -19 284 277 0 15 chr10 61612695 61612760 -83976528 + L2 LINE L2 2976 3039 -274 1692 131 50 18 chr10 61613169 61613451 -83975837 + MER4D LTR ERV1 582 872 0 2956 129 5 101 chr10 61613676 61614311 -83974977 - MER4B LTR ERV1 -36 574 1 2031 128 0 3 chr10 61614476 61614790 -83974498 - AluSc SINE Alu 0 314 2 3142 119 138 67 chr10 61614837 61615509 -83973779 + LTR8A LTR ERV1 8 727 0 10735 30 0 0 chr10 61615532 61616802 -83972486 - L1PA4 LINE L1 -1046 5100 3831 7416 35 5 0 chr10 61616802 61617859 -83971429 + L1PA4 LINE L1 5092 6152 -3 1775 192 41 32 chr10 61618088 61618545 -83970743 - LTR2B LTR ERV1 0 490 1 1454 207 51 73 chr10 61618662 61619373 -83969915 + LTR9 LTR ERV1 1 779 0 3997 139 8 2 chr10 61619522 61620153 -83969135 - MER41B LTR ERV1 0 635 1 275 244 106 62 chr10 61620520 61620780 -83968508 + L1ME LINE L1 5528 5804 -438 282 350 55 24 chr10 61620839 61621130 -83968158 + L1MD2 LINE L1 120 419 -5700 993 283 91 9 chr10 61621213 61621531 -83967757 + LTR16C LTR ERVL 148 491 0 342 330 46 49 chr10 61621555 61621903 -83967385 + L1MD2 LINE L1 445 791 -5328 4863 221 38 17 chr10 61622161 61624363 -83964925 + L1MD2 LINE L1 4091 6340 -2 527 275 47 12 chr10 61624584 61624755 -83964533 + MIR SINE MIR 72 248 -14 281 26 26 0 chr10 61624869 61624907 -83964381 + (TC)n Simple_repeat Simple_repeat 2 40 0 423 0 0 0 chr10 61624907 61624954 -83964334 + (CA)n Simple_repeat Simple_repeat 1 47 0 869 101 57 25 chr10 61625012 61625171 -83964117 - L1MA1 LINE L1 -164 6138 5975 682 130 28 0 chr10 61625400 61625508 -83963780 - MIR SINE MIR -74 188 78 364 336 0 14 chr10 61626013 61626159 -83963129 - MIR SINE MIR -44 218 75 390 267 42 0 chr10 61626245 61626365 -83962923 + MIR SINE MIR 86 210 -52 2537 55 0 6 chr10 61628616 61628927 -83960361 - AluY SINE Alu -2 309 1 2060 91 7 0 chr10 61628927 61629203 -83960085 - AluSp SINE Alu -35 278 1 1687 179 20 37 chr10 61630308 61630661 -83958627 - Tigger7 DNA MER2_type 0 2487 2141 775 169 0 0 chr10 61630661 61630779 -83958509 - Tigger7 DNA MER2_type -2369 118 1 236 338 0 0 chr10 61632412 61632483 -83956805 + L2 LINE L2 1935 2005 -1309 355 197 0 0 chr10 61633795 61633861 -83955427 + MLT1J2 LTR MaLR 20 85 -365 362 234 0 0 chr10 61634144 61634221 -83955067 + MLT1J2 LTR MaLR 122 198 -252 453 298 147 0 chr10 61634287 61634478 -83954810 + MLT1J2 LTR MaLR 214 432 -18 216 333 0 0 chr10 61634764 61634827 -83954461 - MIR3 SINE MIR -43 165 103 2478 148 45 24 chr10 61634858 61635131 -83954157 - Tigger2a DNA MER2_type -2274 434 147 2266 203 55 45 chr10 61635131 61635737 -83953551 - LTR9 LTR ERV1 0 612 1 2478 148 45 24 chr10 61635737 61635888 -83953400 - Tigger2a DNA MER2_type -2561 147 1 23 0 0 0 chr10 61637198 61637221 -83952067 + AT_rich Low_complexity Low_complexity 1 23 0 209 213 0 0 chr10 61637428 61637475 -83951813 + A-rich Low_complexity Low_complexity 1 47 0 1559 194 25 0 chr10 61638162 61638446 -83950842 - AluJb SINE Alu -21 291 1 328 246 55 0 chr10 61638524 61638634 -83950654 + L1ME2 LINE L1 4430 4545 -1601 2004 230 83 71 chr10 61638642 61639632 -83949656 + L1ME2 LINE L1 5146 6149 -15 4450 157 7 20 chr10 61639937 61640704 -83948584 + Tigger2 DNA MER2_type 1 757 -1961 669 43 26 60 chr10 61640755 61640835 -83948453 + Tigger2 DNA MER2_type 2462 2538 -180 7297 128 59 13 chr10 61640835 61642074 -83947214 - HSMAR2 DNA Mariner -4 1298 3 669 43 26 60 chr10 61642074 61642110 -83947178 + Tigger2 DNA MER2_type 2538 2574 -144 627 190 33 0 chr10 61642165 61642286 -83947002 + Tigger2 DNA MER2_type 2539 2663 -55 2281 78 0 26 chr10 61642347 61642654 -83946634 + AluY SINE Alu 1 299 -12 349 233 184 25 chr10 61642749 61642912 -83946376 + Charlie8 DNA MER1_type 326 514 -1903 1973 133 0 7 chr10 61643069 61643369 -83945919 + AluSg SINE Alu 1 298 -12 326 187 27 0 chr10 61644221 61644296 -83944992 + (TATATG)n Simple_repeat Simple_repeat 1 77 0 21 0 0 0 chr10 61644734 61644755 -83944533 + AT_rich Low_complexity Low_complexity 1 21 0 2406 74 0 0 chr10 61644930 61645241 -83944047 - AluY SINE Alu 0 311 1 1368 218 14 45 chr10 61646409 61646784 -83942504 + MLT1A1 LTR MaLR 1 365 0 2344 76 3 0 chr10 61646964 61647266 -83942022 + AluY SINE Alu 1 303 -8 26 0 0 0 chr10 61647496 61647522 -83941766 + AT_rich Low_complexity Low_complexity 1 26 0 247 203 336 0 chr10 61647584 61647727 -83941561 + L1ME4a LINE L1 5833 6023 -98 2578 120 55 12 chr10 61647753 61648154 -83941134 - MSTA LTR MaLR -10 418 1 238 185 25 74 chr10 61648201 61648282 -83941006 + L2 LINE L2 2239 2315 -999 201 162 0 0 chr10 61648289 61648326 -83940962 + (TTTA)n Simple_repeat Simple_repeat 3 39 0 328 203 7 142 chr10 61648327 61648475 -83940813 - L2 LINE L2 0 3313 3186 430 337 207 34 chr10 61648802 61649470 -83939818 + L2 LINE L2 28 810 -2504 1626 272 115 25 chr10 61649674 61650310 -83938978 + L2 LINE L2 805 1497 -1817 327 285 109 47 chr10 61650310 61650503 -83938785 + L2 LINE L2 1409 1613 -1701 472 252 38 76 chr10 61650553 61650843 -83938445 - L1MEd LINE L1 -4910 1209 931 21 0 0 0 chr10 61651015 61651036 -83938252 + AT_rich Low_complexity Low_complexity 1 21 0 1115 195 28 9 chr10 61651635 61651850 -83937438 + L1M3e LINE L1 7 225 -6805 4076 166 47 12 chr10 61651850 61652700 -83936588 + L1MA8 LINE L1 5412 6291 0 25 31 0 0 chr10 61652700 61652732 -83936556 + AT_rich Low_complexity Low_complexity 1 32 0 448 353 22 63 chr10 61653348 61653711 -83935577 - L2 LINE L2 0 3313 2966 11316 66 9 1 chr10 61653793 61655284 -83934004 - L1P LINE L1 -1444 4702 3200 5295 79 5 7 chr10 61655281 61656017 -83933271 + L1P LINE L1 2486 3220 -2926 * 505 317 44 44 chr10 61656468 61656856 -83932432 - HAL1b LINE L1 -621 727 340 285 98 0 0 chr10 61657111 61657152 -83932136 + (TG)n Simple_repeat Simple_repeat 1 41 0 2303 97 0 0 chr10 61657198 61657506 -83931782 - AluY SINE Alu -3 308 1 1746 174 20 0 chr10 61657506 61657804 -83931484 - AluJb SINE Alu -8 304 1 24 0 0 0 chr10 61657810 61657834 -83931454 + AT_rich Low_complexity Low_complexity 1 24 0 26 30 0 0 chr10 61658103 61658136 -83931152 + AT_rich Low_complexity Low_complexity 1 33 0 1591 164 61 0 chr10 61658415 61658678 -83930610 + AluSx SINE Alu 3 281 -31 183 42 0 0 chr10 61658681 61658705 -83930583 + (TA)n Simple_repeat Simple_repeat 2 25 0 293 308 29 29 chr10 61659157 61659261 -83930027 - MER5A DNA MER1_type -7 182 79 233 234 222 48 chr10 61659315 61659482 -83929806 + MIR SINE MIR 7 202 -60 353 248 59 40 chr10 61659600 61659701 -83929587 + L2 LINE L2 3210 3312 -1 2091 97 0 17 chr10 61659753 61660075 -83929213 + AluY SINE Alu 1 317 0 271 242 50 20 chr10 61660098 61660197 -83929091 + MIR SINE MIR 105 206 -56 22 35 0 0 chr10 61660544 61660573 -83928715 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr10 61660859 61660880 -83928408 + AT_rich Low_complexity Low_complexity 1 21 0 238 280 30 50 chr10 61661288 61661388 -83927900 - MIR SINE MIR -94 114 17 1490 123 43 0 chr10 61661476 61661711 -83927577 + MER57B LTR ERV1 190 434 0 387 325 8 8 chr10 61661929 61662046 -83927242 - MLT1J LTR MaLR -289 222 106 248 324 43 58 chr10 61662237 61662444 -83926844 - MLT1K LTR MaLR -283 305 102 639 269 128 32 chr10 61662915 61663346 -83925942 + HAL1 LINE L1 1260 1731 -776 278 203 25 13 chr10 61663568 61663647 -83925641 - MER116 DNA Mariner 0 80 1 397 276 54 27 chr10 61663679 61663900 -83925388 + HAL1 LINE L1 2278 2504 -3 21 57 0 0 chr10 61663928 61663963 -83925325 + AT_rich Low_complexity Low_complexity 1 35 0 453 232 71 0 chr10 61664941 61665053 -83924235 + MIR SINE MIR 134 253 -9 1580 188 10 29 chr10 61665228 61665542 -83923746 + AluJo SINE Alu 1 308 -4 2233 119 37 8 chr10 61667054 61667408 -83921880 + THE1B LTR MaLR 1 364 0 1297 291 102 14 chr10 61667937 61668435 -83920853 + L1ME2 LINE L1 3 544 -5526 * 2152 257 81 44 chr10 61668418 61669533 -83919755 + L1ME2 LINE L1 4397 5593 -505 270 0 0 0 chr10 61669533 61669563 -83919725 + (TAAA)n Simple_repeat Simple_repeat 4 33 0 2152 257 81 44 chr10 61669563 61670052 -83919236 + L1ME2 LINE L1 5593 6062 -36 1072 317 34 16 chr10 61670599 61670987 -83918301 + MLT1I LTR MaLR 6 400 -9 619 331 25 16 chr10 61672622 61672867 -83916421 + MIR SINE MIR 10 256 -6 449 278 44 56 chr10 61673099 61673279 -83916009 + MLT1I LTR MaLR 232 409 0 794 231 71 0 chr10 61673520 61673702 -83915586 + L1ME1 LINE L1 5967 6161 -5 362 265 72 81 chr10 61673732 61673955 -83915333 + L1MC/D LINE L1 5398 5618 -2190 2175 156 43 50 chr10 61674916 61675353 -83913935 + Tigger2a DNA MER2_type 1 434 0 1346 170 17 129 chr10 61678629 61679040 -83910248 + MLT1A1 LTR MaLR 1 365 0 707 171 0 8 chr10 61679271 61679394 -83909894 - FRAM SINE Alu -25 151 30 242 132 0 0 chr10 61679401 61679439 -83909849 + Alu SINE Alu 25 62 -113 781 170 0 15 chr10 61679474 61679609 -83909679 - FLAM_C SINE Alu 0 133 1 22 70 0 0 chr10 61679611 61679654 -83909634 + AT_rich Low_complexity Low_complexity 1 43 0 593 296 101 20 chr10 61679959 61680158 -83909130 - MIR SINE MIR -25 237 23 227 388 35 0 chr10 61680385 61680501 -83908787 + MIR3 SINE MIR 81 200 -8 641 294 105 4 chr10 61683079 61683317 -83905971 + MIR SINE MIR 1 262 0 1370 226 62 48 chr10 61683334 61683830 -83905458 + MLT1D LTR MaLR 1 503 -2 21 0 0 0 chr10 61683930 61683951 -83905337 + AT_rich Low_complexity Low_complexity 1 21 0 1384 198 12 50 chr10 61683951 61684045 -83905243 + AluJo SINE Alu 1 97 -215 1894 143 77 34 chr10 61684045 61684394 -83904894 - THE1B LTR MaLR 0 364 1 1384 198 12 50 chr10 61684394 61684622 -83904666 + AluJo SINE Alu 97 311 -1 220 333 161 0 chr10 61684987 61685080 -83904208 - MER91C DNA MER1_type -32 108 1 273 57 0 0 chr10 61686518 61686553 -83902735 + (TAA)n Simple_repeat Simple_repeat 2 36 0 23 86 0 0 chr10 61686703 61686761 -83902527 + AT_rich Low_complexity Low_complexity 1 58 0 6821 72 0 0 chr10 61686967 61688282 -83901006 + L1PA7 LINE L1 4840 6154 0 21 82 0 0 chr10 61688291 61688340 -83900948 + AT_rich Low_complexity Low_complexity 1 49 0 1158 288 65 30 chr10 61689465 61690528 -83898760 + L1MCc LINE L1 1129 2447 -4675 564 285 84 18 chr10 61690625 61691089 -83898199 + L1MCc LINE L1 2749 3207 -3734 798 230 66 91 chr10 61691203 61691563 -83897725 - L1MC5 LINE L1 -303 7658 7313 1407 108 17 22 chr10 61691563 61691794 -83897494 + L1PA11 LINE L1 5942 6171 -3 798 230 66 91 chr10 61691794 61691947 -83897341 - L1MC5 LINE L1 -648 7313 7158 269 360 29 34 chr10 61692071 61692246 -83897042 - L2 LINE L2 -24 3289 3116 2106 114 10 7 chr10 61692763 61693062 -83896226 - AluSq SINE Alu -13 300 1 456 261 131 45 chr10 61693361 61693560 -83895728 + MIR SINE MIR 16 231 -31 12324 152 47 32 chr10 61695002 61695383 -83893905 + L1MA6 LINE L1 2860 3234 -3057 2336 86 0 29 chr10 61695383 61695698 -83893590 + AluY SINE Alu 1 306 -5 12324 152 47 32 chr10 61695698 61698140 -83891148 + L1MA6 LINE L1 3234 5728 -563 6278 83 19 12 chr10 61698140 61699131 -83890157 + L1PA10 LINE L1 5172 6168 0 12324 152 47 32 chr10 61699131 61699345 -83889943 + L1MA6 LINE L1 5728 5937 -354 1198 133 17 6 chr10 61699349 61699529 -83889759 + AluJb SINE Alu 118 299 -13 1618 169 51 25 chr10 61699529 61699884 -83889404 + L1MA6 LINE L1 5936 6299 -1 204 67 0 0 chr10 61700795 61700825 -83888463 + (A)n Simple_repeat Simple_repeat 1 30 0 704 319 52 0 chr10 61701353 61701601 -83887687 - MIR SINE MIR 0 262 2 423 265 110 60 chr10 61701688 61701888 -83887400 + L2 LINE L2 2243 2452 -862 1452 216 119 67 chr10 61701918 61702450 -83886838 + MLT1F1 LTR MaLR 13 567 0 981 266 48 4 chr10 61702452 61702704 -83886584 + L2 LINE L2 2453 2715 -599 21 36 0 0 chr10 61703436 61703464 -83885824 + AT_rich Low_complexity Low_complexity 1 28 0 1041 269 64 71 chr10 61703702 61704406 -83884882 + MER77 LTR ERV1 24 599 -6 457 245 112 101 chr10 61704494 61704802 -83884486 + L2 LINE L2 2700 3005 -308 1802 164 3 23 chr10 61704832 61705161 -83884127 + AluJo SINE Alu 1 323 0 801 225 9 164 chr10 61706023 61706064 -83883224 + MLT2B1 LTR ERVL 1 47 -473 1615 190 0 23 chr10 61706064 61706369 -83882919 + AluJb SINE Alu 1 298 -14 801 225 9 164 chr10 61706369 61706754 -83882534 + MLT2B1 LTR ERVL 47 361 -159 1681 167 6 48 chr10 61706971 61707282 -83882006 + AluJo SINE Alu 1 298 -14 468 301 92 32 chr10 61709085 61709401 -83879887 - L1ME4a LINE L1 -25 6096 5762 330 279 78 31 chr10 61709506 61709688 -83879600 + MLT1J1 LTR MaLR 5 213 -237 387 287 79 55 chr10 61710290 61710454 -83878834 - MIR3 SINE MIR -26 182 15 248 279 25 25 chr10 61710794 61710873 -83878415 - L2 LINE L2 -200 3072 2994 1829 121 4 15 chr10 61712178 61712450 -83876838 + AluSx SINE Alu 44 312 0 535 63 13 0 chr10 61712456 61712535 -83876753 + L1PA7 LINE L1 6075 6154 0 936 233 143 36 chr10 61713883 61714240 -83875048 + MLT1I LTR MaLR 15 409 0 5899 59 5 3 chr10 61715266 61716016 -83873272 + L1PA8 LINE L1 5421 6172 0 2159 105 3 0 chr10 61716028 61716380 -83872908 + AluSq SINE Alu 1 353 0 1690 137 18 62 chr10 61716735 61717071 -83872217 + L1MC1 LINE L1 6008 6328 -5 416 348 59 29 chr10 61717243 61717447 -83871841 - MIR SINE MIR -38 224 15 378 330 219 26 chr10 61717724 61718171 -83871117 - L2 LINE L2 -217 3055 2506 731 227 78 28 chr10 61719662 61719944 -83869344 + LTR37A LTR ERV1 123 418 -8 345 273 30 0 chr10 61719964 61720063 -83869225 - L3 LINE CR1 -74 1503 1402 1131 199 54 43 chr10 61720169 61720502 -83868786 + MER33 DNA MER1_type 1 324 0 320 285 23 31 chr10 61720515 61720645 -83868643 - L3 LINE CR1 -334 1243 1115 517 311 204 22 chr10 61721432 61721834 -83867454 - L3 LINE CR1 -918 659 185 326 257 140 37 chr10 61721887 61722023 -83867265 + MIR SINE MIR 13 162 -100 186 322 112 46 chr10 61722334 61722486 -83866802 + MIR SINE MIR 25 186 -76 201 192 19 0 chr10 61722600 61722652 -83866636 + (TTAAA)n Simple_repeat Simple_repeat 5 57 0 339 355 90 23 chr10 61722748 61723047 -83866241 + L2 LINE L2 2456 2774 -540 23 68 0 0 chr10 61723207 61723251 -83866037 + AT_rich Low_complexity Low_complexity 1 44 0 1448 148 0 0 chr10 61723441 61723650 -83865638 - AluJb SINE Alu -18 294 86 203 356 20 20 chr10 61723697 61723798 -83865490 - MIR SINE MIR -113 149 49 239 375 32 24 chr10 61725015 61725263 -83864025 + L2 LINE L2 2576 2825 -489 528 316 47 87 chr10 61725598 61726044 -83863244 + L2 LINE L2 2841 3268 -4 193 310 17 0 chr10 61726473 61726531 -83862757 + MIR SINE MIR 64 122 -86 354 236 169 0 chr10 61726533 61726622 -83862666 - LTR16C LTR ERVL 0 491 388 795 296 45 16 chr10 61726702 61726945 -83862343 - LTR16C LTR ERVL -241 250 1 210 200 109 0 chr10 61726946 61727001 -83862287 + MIR SINE MIR 120 180 -82 1566 185 3 7 chr10 61727252 61727550 -83861738 + AluJo SINE Alu 11 307 -5 293 349 66 13 chr10 61727699 61727851 -83861437 - MIR3 SINE MIR -38 170 11 629 271 92 19 chr10 61728518 61728725 -83860563 + MIR SINE MIR 20 241 -21 1452 252 68 20 chr10 61728884 61729324 -83859964 + MLT1C LTR MaLR 6 466 -1 740 234 59 16 chr10 61729335 61729591 -83859697 + LTR37B LTR ERV1 199 465 -3 1843 152 14 0 chr10 61729597 61729893 -83859395 + AluJb SINE Alu 7 306 -6 228 139 0 0 chr10 61730225 61730268 -83859020 - L1MA5 LINE L1 0 6300 6258 189 350 26 60 chr10 61731318 61731435 -83857853 + MIR SINE MIR 24 136 -72 260 219 131 7 chr10 61731538 61731675 -83857613 + L1ME4a LINE L1 5767 5920 -201 378 271 90 0 chr10 61732276 61732409 -83856879 + MER103 DNA DNA 20 164 -2 2427 79 6 3 chr10 61732665 61732995 -83856293 - L1PA7 LINE L1 -1 6153 5823 528 248 23 8 chr10 61733215 61733344 -83855944 - Charlie8 DNA MER1_type -2161 256 126 392 133 95 38 chr10 61733357 61733462 -83855826 - L1MB8 LINE L1 -21 6157 6047 1453 114 80 0 chr10 61735148 61735411 -83853877 + L1MA6 LINE L1 6017 6300 0 260 222 37 9 chr10 61735421 61735529 -83853759 + (TA)n Simple_repeat Simple_repeat 2 112 0 2564 181 83 22 chr10 61736633 61736749 -83852539 - L1MA9 LINE L1 -37 6275 6168 396 0 0 0 chr10 61736749 61736793 -83852495 + (TG)n Simple_repeat Simple_repeat 1 44 0 2564 181 83 22 chr10 61736793 61737279 -83852009 - L1MA9 LINE L1 -144 6168 5636 319 209 108 72 chr10 61737367 61737506 -83851782 + MER5A DNA MER1_type 46 189 0 281 336 29 19 chr10 61737717 61737821 -83851467 - MIR SINE MIR -87 121 17 180 0 0 0 chr10 61737865 61737885 -83851403 + (CAAAAA)n Simple_repeat Simple_repeat 5 24 0 461 341 45 0 chr10 61737888 61738064 -83851224 - MIR SINE MIR -8 254 71 1985 194 84 26 chr10 61738662 61739125 -83850163 + LTR2B LTR ERV1 1 490 0 340 276 59 9 chr10 61740258 61740388 -83848900 - MLT1I LTR MaLR -249 160 24 387 304 8 24 chr10 61740411 61740536 -83848752 - L3 LINE CR1 -340 1237 1115 555 313 101 60 chr10 61740678 61741018 -83848270 - L3 LINE CR1 -451 1126 754 4560 90 11 2 chr10 61741018 61741662 -83847626 + L1PB2 LINE L1 5497 6146 -5 555 313 101 60 chr10 61741662 61741868 -83847420 - L3 LINE CR1 -823 754 558 8553 62 2 3 chr10 61742022 61743094 -83846194 + MER11C LTR ERVK 1 1071 0 378 317 70 0 chr10 61743187 61743329 -83845959 + MIR3 SINE MIR 54 205 -3 22 0 0 0 chr10 61743681 61743703 -83845585 + AT_rich Low_complexity Low_complexity 1 22 0 598 259 83 31 chr10 61744971 61745275 -83844013 - MLT1I LTR MaLR -49 360 61 273 256 0 132 chr10 61745864 61745985 -83843303 + MER102a DNA MER1_type 226 330 0 744 151 78 12 chr10 61746017 61746183 -83843105 + MER3 DNA MER1_type 2 131 -78 234 91 0 0 chr10 61746184 61746217 -83843071 + (GA)n Simple_repeat Simple_repeat 2 34 0 1093 248 72 116 chr10 61746295 61746847 -83842441 - MLT1G LTR MaLR -66 524 1 273 330 122 0 chr10 61747895 61748116 -83841172 - MLT1G-int LTR MaLR -830 541 294 1046 281 67 83 chr10 61748191 61748761 -83840527 - MLT1G LTR MaLR -42 548 1 1942 140 28 0 chr10 61748909 61749194 -83840094 + AluSx SINE Alu 1 293 -19 661 306 109 38 chr10 61749196 61749726 -83839562 - MER90 LTR ERV1 -7 607 1 25 31 0 0 chr10 61750295 61750327 -83838961 + AT_rich Low_complexity Low_complexity 1 32 0 1641 268 96 10 chr10 61751529 61752041 -83837247 + MLT1E3 LTR MaLR 69 624 0 197 143 29 0 chr10 61752388 61752423 -83836865 + MIR SINE MIR 156 191 -71 3533 149 18 17 chr10 61753240 61753842 -83835446 + LTR26 LTR ERV1 1 603 0 356 322 77 21 chr10 61754002 61754145 -83835143 - L2 LINE L2 -1 3271 3121 248 290 75 51 chr10 61754295 61754464 -83834824 + Charlie8 DNA MER1_type 54 231 -110 1829 150 67 22 chr10 61754464 61754823 -83834465 + THE1C LTR MaLR 1 375 0 248 290 75 51 chr10 61754823 61754867 -83834421 + Charlie8 DNA MER1_type 231 272 -69 261 261 0 0 chr10 61754927 61754992 -83834296 + Charlie8 DNA MER1_type 2353 2417 0 1562 216 0 20 chr10 61755302 61755607 -83833681 - AluJb SINE Alu -13 299 1 548 222 261 15 chr10 61755840 61756043 -83833245 - MIR SINE MIR 0 262 10 651 187 8 8 chr10 61756462 61756596 -83832692 + MLT1A1 LTR MaLR 1 134 -231 671 169 8 15 chr10 61756600 61756730 -83832558 - MSTD LTR MaLR 0 396 268 11310 118 13 28 chr10 61756975 61758944 -83830344 - L1P LINE L1 -3545 2601 663 290 256 198 0 chr10 61758949 61759070 -83830218 - MIR SINE MIR -71 191 47 22 0 0 0 chr10 61759286 61759308 -83829980 + AT_rich Low_complexity Low_complexity 1 22 0 1029 199 13 30 chr10 61760124 61760355 -83828933 - MLT1A1 LTR MaLR -2 363 137 1017 177 139 25 chr10 61760367 61760604 -83828684 - AluJb SINE Alu -39 273 10 6545 82 16 4 chr10 61761203 61765010 -83824278 - L1PA7 LINE L1 -3 6151 2245 5017 114 15 57 chr10 61765144 61765311 -83823977 - L1PB3 LINE L1 -2 6152 5979 303 28 0 0 chr10 61765311 61765347 -83823941 + (TTA)n Simple_repeat Simple_repeat 2 37 0 2163 115 3 0 chr10 61765347 61765634 -83823654 - AluSx SINE Alu -24 288 1 5017 114 15 57 chr10 61765634 61766199 -83823089 - L1PB3 LINE L1 -174 5980 5475 2097 99 7 3 chr10 61766199 61766483 -83822805 + AluSx SINE Alu 16 300 -12 5017 114 15 57 chr10 61766483 61766793 -83822495 - L1PB3 LINE L1 -679 5475 5153 1964 107 0 4 chr10 61766860 61767123 -83822165 - AluSx SINE Alu -16 296 35 11335 84 0 13 chr10 61767647 61769317 -83819971 + L1PA7 LINE L1 3340 4987 -1159 756 128 0 0 chr10 61769317 61769426 -83819862 + AluSg/x SINE Alu 172 280 -32 1655 72 0 0 chr10 61769430 61769653 -83819635 + L1PA7 LINE L1 5898 6120 -34 1636 225 85 13 chr10 61769850 61770308 -83818980 + MER76 LTR ERV 1 491 -197 387 313 25 6 chr10 61770357 61770517 -83818771 - L1M4 LINE L1 -2019 4127 3965 7543 31 0 0 chr10 61770527 61771715 -83817573 - L1PA4 LINE L1 -3 6152 4964 * 7795 20 0 0 chr10 61771709 61772709 -83816579 + L1PA3 LINE L1 5156 6155 0 21 0 0 0 chr10 61772715 61772736 -83816552 + AT_rich Low_complexity Low_complexity 1 21 0 936 203 72 27 chr10 61773030 61773252 -83816036 + MER21B LTR ERV1 561 792 -71 221 305 0 61 chr10 61773979 61774061 -83815227 + MER5A DNA MER1_type 27 103 -86 2363 89 0 0 chr10 61774386 61774677 -83814611 - AluSc SINE Alu -18 291 1 515 124 31 0 chr10 61776521 61776618 -83812670 + L1M4 LINE L1 5706 5805 -369 710 211 72 11 chr10 61777286 61777466 -83811822 + MIR SINE MIR 72 262 0 246 221 0 44 chr10 61777513 61777581 -83811707 - MER103 DNA DNA -80 86 22 2533 55 0 3 chr10 61778423 61778730 -83810558 + AluY SINE Alu 1 306 -5 1981 201 103 34 chr10 61778965 61779552 -83809736 - MLT1E2 LTR MaLR 0 626 1 420 296 45 0 chr10 61779926 61780058 -83809230 + L2 LINE L2 3125 3262 -10 255 61 0 0 chr10 61780066 61780099 -83809189 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 2360 162 67 2 chr10 61780442 61780893 -83808395 - MER68 LTR ERV1 -69 493 14 33 0 0 0 chr10 61781574 61781607 -83807681 + AT_rich Low_complexity Low_complexity 1 33 0 276 376 56 0 chr10 61781664 61781789 -83807499 - L2 LINE L2 -16 3256 3125 2339 53 0 3 chr10 61782055 61782384 -83806904 - AluY SINE Alu 0 328 1 540 279 55 75 chr10 61782390 61782737 -83806551 + L2 LINE L2 1495 1834 -1480 14701 83 6 25 chr10 61782842 61783948 -83805340 - L1PA7 LINE L1 -5 6149 5023 207 0 0 0 chr10 61783948 61783971 -83805317 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 14701 83 6 25 chr10 61783971 61785797 -83803491 - L1PA7 LINE L1 -1131 5023 3253 6906 53 8 11 chr10 61786735 61787685 -83801603 + L1PA7 LINE L1 5208 6154 0 677 259 69 16 chr10 61788251 61788498 -83800790 - L1MEc LINE L1 -6092 304 45 297 0 0 0 chr10 61788516 61788549 -83800739 + (CA)n Simple_repeat Simple_repeat 2 34 0 228 292 0 0 chr10 61788572 61788661 -83800627 - L1MC4 LINE L1 -1339 6703 6615 374 204 11 0 chr10 61788668 61788756 -83800532 + (CATATA)n Simple_repeat Simple_repeat 2 90 0 629 294 105 4 chr10 61789828 61790066 -83799222 + MIR SINE MIR 1 262 0 1367 226 62 48 chr10 61790083 61790579 -83798709 + MLT1D LTR MaLR 1 503 -2 21 0 0 0 chr10 61790679 61790700 -83798588 + AT_rich Low_complexity Low_complexity 1 21 0 1436 198 12 50 chr10 61790700 61790794 -83798494 + AluJo SINE Alu 1 97 -215 1899 141 81 35 chr10 61790794 61791142 -83798146 - THE1B LTR MaLR 0 364 1 1436 198 12 50 chr10 61791142 61791370 -83797918 + AluJo SINE Alu 97 311 -1 232 333 161 0 chr10 61791735 61791828 -83797460 + MER91C DNA MER1_type 33 140 0 29 0 0 0 chr10 61793262 61793291 -83795997 + AT_rich Low_complexity Low_complexity 1 29 0 23 86 0 0 chr10 61793449 61793507 -83795781 + AT_rich Low_complexity Low_complexity 1 58 0 6832 72 0 0 chr10 61793713 61795028 -83794260 + L1PA7 LINE L1 4840 6154 0 21 82 0 0 chr10 61795037 61795086 -83794202 + AT_rich Low_complexity Low_complexity 1 49 0 636 262 71 43 chr10 61796211 61796535 -83792753 + L1MCc LINE L1 1129 1461 -4962 939 278 62 29 chr10 61796592 61797217 -83792071 + L1MCc LINE L1 1548 2193 -4748 465 287 84 17 chr10 61797371 61797835 -83791453 + L1MCc LINE L1 2749 3207 -3734 623 216 72 97 chr10 61797949 61798309 -83790979 - L1MC5 LINE L1 -303 7658 7313 1435 108 17 22 chr10 61798309 61798540 -83790748 + L1PA11 LINE L1 5942 6171 -3 623 216 72 97 chr10 61798540 61798693 -83790595 - L1MC5 LINE L1 -648 7313 7158 254 360 29 34 chr10 61798817 61798992 -83790296 - L2 LINE L2 -24 3289 3116 2151 114 10 7 chr10 61799509 61799808 -83789480 - AluSq SINE Alu -13 300 1 465 261 131 45 chr10 61800107 61800306 -83788982 + MIR SINE MIR 16 231 -31 1511 148 93 5 chr10 61801748 61802125 -83787163 + L1 LINE L1 2860 3269 -2877 2050 121 3 29 chr10 61802129 61802436 -83786852 + AluY SINE Alu 1 299 -12 1053 209 159 7 chr10 61802436 61802738 -83786550 + L1MB5 LINE L1 5819 6166 -8 2090 136 3 3 chr10 61802823 61803117 -83786171 - AluSq SINE Alu -14 299 6 25 0 0 0 chr10 61803557 61803582 -83785706 + AT_rich Low_complexity Low_complexity 1 25 0 3066 142 24 4 chr10 61803594 61804131 -83785157 - MER50 LTR ERV1 -186 548 1 6930 201 10 7 chr10 61804608 61806170 -83783118 + L1P LINE L1 1073 2639 -3507 354 130 0 0 chr10 61806174 61806228 -83783060 + THE1-int LTR MaLR 616 669 -911 284 271 31 21 chr10 61807717 61807813 -83781475 - MIR SINE MIR -60 202 106 524 114 0 0 chr10 61807849 61807928 -83781360 - THE1A LTR MaLR -77 278 200 622 293 117 21 chr10 61808030 61808320 -83780968 + L2 LINE L2 2996 3313 0 2638 85 8 0 chr10 61808362 61808714 -83780574 - THE1A LTR MaLR 0 355 1 11010 100 3 0 chr10 61808714 61809789 -83779499 - THE1A-int LTR MaLR 0 1580 498 195 69 0 0 chr10 61809789 61809818 -83779470 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 11010 100 3 0 chr10 61809818 61810294 -83778994 - THE1A-int LTR MaLR -1082 498 25 2526 100 11 0 chr10 61810294 61810645 -83778643 - THE1A LTR MaLR 0 355 1 207 181 42 0 chr10 61811344 61811416 -83777872 + CT-rich Low_complexity Low_complexity 2 76 0 243 114 0 0 chr10 61811416 61811460 -83777828 + (CA)n Simple_repeat Simple_repeat 1 44 0 25 31 0 0 chr10 61811860 61811892 -83777396 + AT_rich Low_complexity Low_complexity 1 32 0 231 114 0 0 chr10 61812187 61812222 -83777066 + (TG)n Simple_repeat Simple_repeat 2 36 0 826 319 86 6 chr10 61812222 61812548 -83776740 - L2 LINE L2 -576 2738 2387 266 290 170 0 chr10 61813317 61813417 -83775871 - L2 LINE L2 -18 3254 3138 200 345 119 72 chr10 61813841 61813993 -83775295 + L2 LINE L2 2826 2970 -302 1592 166 9 66 chr10 61813993 61814313 -83774975 - AluJo SINE Alu -10 302 1 200 345 119 72 chr10 61814313 61814505 -83774783 + L2 LINE L2 2970 3186 -86 611 254 197 0 chr10 61814519 61814712 -83774576 + MIR SINE MIR 3 233 -29 245 245 78 69 chr10 61815961 61816063 -83773225 - L2 LINE L2 -2 3270 3168 735 270 76 8 chr10 61816762 61816999 -83772289 - LTR16A LTR ERVL -12 438 186 373 228 0 43 chr10 61817637 61817729 -83771559 - L2 LINE L2 0 3272 3185 208 336 26 26 chr10 61818510 61818626 -83770662 - L2 LINE L2 -466 2848 2733 867 252 5 14 chr10 61818841 61819051 -83770237 + MIR SINE MIR 41 248 -14 5427 122 15 40 chr10 61819552 61819719 -83769569 - L1PB3 LINE L1 -2 6152 5982 384 22 0 0 chr10 61819719 61819764 -83769524 + (TTA)n Simple_repeat Simple_repeat 2 46 0 2137 118 3 0 chr10 61819764 61820051 -83769237 - AluSx SINE Alu -24 288 1 5427 122 15 40 chr10 61820051 61820616 -83768672 - L1PB3 LINE L1 -171 5983 5405 2097 99 7 3 chr10 61820616 61820900 -83768388 + AluSx SINE Alu 16 300 -12 5427 122 15 40 chr10 61820900 61821664 -83767624 - L1PB3 LINE L1 -749 5405 4692 1311 203 20 0 chr10 61821657 61821952 -83767336 - L1PB3 LINE L1 -1722 4424 4124 * 353 213 57 166 chr10 61821955 61822166 -83767122 - MIR SINE MIR -39 223 36 1058 221 18 0 chr10 61822225 61822505 -83766783 + L1MD3 LINE L1 7711 7995 0 764 299 25 47 chr10 61823659 61824029 -83765259 - LTR16A1 LTR ERVL -1 476 106 2404 72 0 10 chr10 61824087 61824391 -83764897 + AluY SINE Alu 1 301 -10 430 136 0 37 chr10 61825284 61825365 -83763923 + MADE1 DNA Mariner 1 78 -2 334 240 70 10 chr10 61825374 61825474 -83763814 - MIR3 SINE MIR -9 199 94 2353 132 74 19 chr10 61826301 61826734 -83762554 + LTR32 LTR ERVL 15 471 0 256 297 72 14 chr10 61826738 61826876 -83762412 + MIR SINE MIR 105 250 -12 295 236 127 18 chr10 61827496 61827606 -83761682 + MIR SINE MIR 99 220 -42 1961 137 0 3 chr10 61827669 61827983 -83761305 + AluSx SINE Alu 1 313 0 1960 158 17 0 chr10 61828544 61828836 -83760452 + AluJb SINE Alu 7 303 -9 670 202 107 12 chr10 61828879 61829047 -83760241 - MIR SINE MIR -2 260 77 254 248 287 8 chr10 61829935 61830064 -83759224 - L2 LINE L2 -3 3310 3146 791 297 106 27 chr10 61830199 61830680 -83758608 + LTR33 LTR ERVL 3 521 0 264 358 60 15 chr10 61830759 61830893 -83758395 - L2 LINE L2 -7 3265 3126 183 203 14 108 chr10 61831076 61831150 -83758138 - L2 LINE L2 -175 3097 3031 205 365 70 17 chr10 61832158 61832273 -83757015 - L2 LINE L2 -50 3222 3102 2200 111 159 5 chr10 61832345 61832716 -83756572 + MSTA LTR MaLR 1 428 0 2054 148 0 7 chr10 61833660 61833957 -83755331 - AluSx SINE Alu -17 295 1 2159 149 48 2 chr10 61834203 61834599 -83754689 + Tigger2 DNA MER2_type 2281 2694 -24 24 0 0 0 chr10 61834859 61834883 -83754405 + AT_rich Low_complexity Low_complexity 1 24 0 287 241 36 24 chr10 61835499 61835582 -83753706 + GA-rich Low_complexity Low_complexity 5 88 0 362 307 104 22 chr10 61835588 61836214 -83753074 + L1M4 LINE L1 4152 4828 -1318 373 198 50 10 chr10 61836633 61836734 -83752554 + MLT1I LTR MaLR 305 409 0 528 278 46 23 chr10 61836745 61837091 -83752197 + L1M4 LINE L1 4943 5296 -850 1554 180 0 4 chr10 61837642 61837903 -83751385 + AluJb SINE Alu 1 260 -52 2912 210 49 39 chr10 61837920 61838774 -83750514 + L1MD2 LINE L1 4846 5690 -669 2133 179 19 27 chr10 61838774 61839187 -83750101 - MLT2D LTR ERVL 0 414 5 2912 210 49 39 chr10 61839187 61839494 -83749794 + L1MD2 LINE L1 5690 6021 -338 3849 115 52 38 chr10 61839494 61840129 -83749159 - LTR9B LTR ERV1 0 644 1 2912 210 49 39 chr10 61840129 61840209 -83749079 + L1MD2 LINE L1 6021 6099 -260 1817 170 68 34 chr10 61840219 61840661 -83748627 - LTR2B LTR ERV1 0 490 34 1690 100 13 23 chr10 61840678 61841066 -83748222 - LTR7 LTR ERV1 -14 436 1 2449 91 35 13 chr10 61841066 61841463 -83747825 - HERVH LTR ERV1 0 7713 7308 373 91 30 0 chr10 61841464 61841530 -83747758 - LTR49 LTR ERV1 -525 70 3 2345 208 53 55 chr10 61842456 61843133 -83746155 + LTR8 LTR ERV1 16 691 0 22 35 0 0 chr10 61843183 61843212 -83746076 + AT_rich Low_complexity Low_complexity 1 29 0 198 296 0 19 chr10 61843286 61843340 -83745948 + L2 LINE L2 3173 3225 -88 444 271 74 44 chr10 61843402 61843605 -83745683 - MIR SINE MIR -26 236 28 384 182 61 18 chr10 61843884 61844049 -83745239 + (TATAA)n Simple_repeat Simple_repeat 3 174 0 2763 155 34 37 chr10 61844591 61844708 -83744580 - MER34B LTR ERV1 -30 535 419 249 33 0 0 chr10 61844708 61844738 -83744550 + (TA)n Simple_repeat Simple_repeat 2 31 0 2763 155 34 37 chr10 61844738 61845157 -83744131 - MER34B LTR ERV1 -146 419 1 367 127 0 16 chr10 61845202 61845265 -83744023 + MER92C LTR ERV1 1 62 -492 1352 158 63 12 chr10 61845283 61845611 -83743677 + LTR49 LTR ERV1 2 425 -170 702 179 0 0 chr10 61845612 61845746 -83743542 + (TG)n Simple_repeat Simple_repeat 2 135 0 837 114 60 24 chr10 61845749 61845915 -83743373 + LTR49 LTR ERV1 424 595 0 354 205 51 0 chr10 61845916 61845994 -83743294 + MER92B LTR ERV1 62 143 -493 1335 154 59 4 chr10 61845995 61846248 -83743040 + LTR24C LTR ERV1 1 267 -368 753 61 0 0 chr10 61846786 61846884 -83742404 - L1PA8 LINE L1 -3 6169 6072 1885 132 106 6 chr10 61846884 61847233 -83742055 + LTR24C LTR ERV1 252 635 0 1766 181 28 82 chr10 61847233 61847735 -83741553 + MER92B LTR ERV1 141 615 -21 214 28 28 28 chr10 61847738 61847774 -83741514 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 1608 147 0 72 chr10 61847776 61848069 -83741219 - AluSg SINE Alu -25 285 14 2029 123 40 40 chr10 61848780 61849155 -83740133 - THE1C LTR MaLR 0 375 1 1107 173 27 108 chr10 61849236 61849441 -83739847 + MER63B DNA MER1_type 1 170 -892 1663 177 127 24 chr10 61849441 61849899 -83739389 - LTR22 LTR ERVK -4 505 1 1107 173 27 108 chr10 61849899 61850028 -83739260 + MER63B DNA MER1_type 170 308 -128 1493 228 92 7 chr10 61850033 61850445 -83738843 + L1ME1 LINE L1 5695 6141 -25 751 250 0 5 chr10 61850461 61850653 -83738635 + L1PB4 LINE L1 5966 6156 0 32 26 0 0 chr10 61850660 61850699 -83738589 + AT_rich Low_complexity Low_complexity 1 39 0 265 187 66 0 chr10 61850706 61850797 -83738491 + (TA)n Simple_repeat Simple_repeat 1 97 0 183 255 43 0 chr10 61850880 61850927 -83738361 + MIR3 SINE MIR 111 159 -49 201 333 158 12 chr10 61851564 61851735 -83737553 - MIR SINE MIR -18 244 49 2452 145 39 2 chr10 61851931 61852344 -83736944 + MSTA LTR MaLR 1 428 0 245 355 120 5 chr10 61853875 61854075 -83735213 + L3b LINE CR1 1292 1514 -69 536 266 0 7 chr10 61854317 61854456 -83734832 + MLT1C LTR MaLR 330 467 0 185 244 35 122 chr10 61854642 61854757 -83734531 - MIR SINE MIR -78 184 80 2236 109 0 13 chr10 61855480 61855791 -83733497 - AluSq SINE Alu -6 307 1 216 191 19 9 chr10 61857152 61857257 -83732031 + (TA)n Simple_repeat Simple_repeat 2 107 0 317 283 104 0 chr10 61858368 61858474 -83730814 + MIR SINE MIR 75 191 -71 2378 87 3 6 chr10 61858477 61858788 -83730500 + AluSx SINE Alu 1 310 -2 1665 200 0 0 chr10 61860076 61860356 -83728932 + AluJo SINE Alu 1 280 -32 229 170 0 0 chr10 61860378 61860431 -83728857 + L1MC4 LINE L1 6651 6703 -1339 240 163 0 0 chr10 61860432 61860475 -83728813 + (TA)n Simple_repeat Simple_repeat 1 43 0 734 179 0 0 chr10 61861364 61861476 -83727812 + FRAM SINE Alu 29 140 -36 224 71 48 0 chr10 61861482 61861524 -83727764 + (TTAAA)n Simple_repeat Simple_repeat 2 45 0 183 225 100 0 chr10 61861527 61861567 -83727721 + MIR3 SINE MIR 120 163 -45 28 86 0 0 chr10 61861574 61861644 -83727644 + AT_rich Low_complexity Low_complexity 1 70 0 335 275 29 22 chr10 61862317 61862455 -83726833 - MLT1H LTR MaLR -292 257 119 1744 174 22 30 chr10 61862497 61862865 -83726423 - MLT1A1 LTR MaLR 0 365 1 231 314 12 0 chr10 61863114 61863200 -83726088 - MLT1A1-int LTR MaLR -262 1109 1023 1331 189 91 0 chr10 61863304 61863569 -83725719 - AluJo SINE Alu -13 289 1 254 255 41 10 chr10 61864220 61864318 -83724970 - MLT1A1-int LTR MaLR -1634 101 1 281 264 169 14 chr10 61864318 61864466 -83724822 - MLT1A1 LTR MaLR 0 549 379 352 273 50 0 chr10 61864576 61864675 -83724613 + MLT1H LTR MaLR 131 234 -315 1119 195 142 56 chr10 61864815 61865245 -83724043 + MLT1D LTR MaLR 24 490 -15 231 220 0 0 chr10 61865612 61865662 -83723626 + L1MEc LINE L1 1958 2007 -4389 26 64 0 0 chr10 61865757 61865804 -83723484 + AT_rich Low_complexity Low_complexity 1 47 0 808 290 17 64 chr10 61865897 61866432 -83722856 + L1MEc LINE L1 1283 1792 -4604 507 33 0 0 chr10 61866432 61866493 -83722795 + (TG)n Simple_repeat Simple_repeat 1 61 0 1482 110 50 0 chr10 61866522 61866741 -83722547 - MER30 DNA MER1_type 0 230 1 5946 87 10 28 chr10 61866748 61867750 -83721538 + L1PA13 LINE L1 5178 6161 -2 608 290 50 81 chr10 61867760 61868219 -83721069 - L1M4 LINE L1 -1260 4886 4442 834 170 95 71 chr10 61868520 61868814 -83720474 + LTR8A LTR ERV1 427 727 0 396 246 0 16 chr10 61868824 61868946 -83720342 + L1M4 LINE L1 3728 3847 -2299 3582 222 46 17 chr10 61868978 61870868 -83718420 + L1ME2 LINE L1 298 2425 -4320 2715 161 18 55 chr10 61870870 61871143 -83718145 + L1MB7 LINE L1 5532 5814 -370 1898 168 0 22 chr10 61871143 61871459 -83717829 + AluSx SINE Alu 1 309 -3 2715 161 18 55 chr10 61871459 61871807 -83717481 + L1MB7 LINE L1 5814 6130 -54 1068 229 57 3 chr10 61871800 61872115 -83717173 + L1ME2 LINE L1 4254 4585 -1979 * 2214 209 54 46 chr10 61872203 61872343 -83716945 + L1ME2 LINE L1 5474 5611 -971 2381 97 0 3 chr10 61872343 61872653 -83716635 + AluSc SINE Alu 1 309 0 2214 209 54 46 chr10 61872653 61873427 -83715861 + L1ME2 LINE L1 5611 6464 -118 297 288 62 38 chr10 61873724 61873891 -83715397 - MIR SINE MIR -63 145 19 1661 174 56 112 chr10 61874185 61874720 -83714568 - MLT1D LTR MaLR 0 505 1 536 215 44 60 chr10 61875237 61875553 -83713735 - L1MC5 LINE L1 -48 7913 7603 10653 77 0 9 chr10 61875572 61877798 -83711490 + L1PA7 LINE L1 3917 6142 -12 302 167 103 13 chr10 61877798 61877868 -83711420 + L1MC4 LINE L1 6613 6692 -1350 360 250 24 48 chr10 61877922 61878046 -83711242 - L1M4 LINE L1 -2816 3330 3210 658 95 103 0 chr10 61878072 61878188 -83711100 - L1MB4 LINE L1 -1 6179 6052 469 302 16 16 chr10 61879568 61879694 -83709594 - L2 LINE L2 -26 3287 3162 22 0 0 0 chr10 61879814 61879836 -83709452 + AT_rich Low_complexity Low_complexity 1 22 0 1683 175 7 3 chr10 61879951 61880248 -83709040 + AluJb SINE Alu 15 312 0 865 158 55 6 chr10 61880256 61880420 -83708868 + AluJb SINE Alu 141 312 0 528 243 22 60 chr10 61880921 61881106 -83708182 - MER5B DNA MER1_type 0 178 1 1327 69 0 0 chr10 61881265 61881439 -83707849 - PABL_A LTR ERV1 0 660 487 336 310 51 0 chr10 61881487 61881645 -83707643 - MER102b DNA MER1_type -1 340 175 2218 84 0 3 chr10 61881705 61882013 -83707275 + AluSq SINE Alu 1 307 0 2505 202 18 21 chr10 61882700 61883265 -83706023 + MER99 DNA DNA 216 778 -50 23 0 0 0 chr10 61883265 61883288 -83706000 + AT_rich Low_complexity Low_complexity 1 23 0 346 273 23 0 chr10 61883288 61883376 -83705912 + L1MC4 LINE L1 6614 6703 -1339 294 179 0 0 chr10 61883376 61883432 -83705856 + (CA)n Simple_repeat Simple_repeat 2 57 0 2857 113 9 25 chr10 61883802 61884243 -83705045 + MER57B LTR ERV1 1 434 0 193 218 91 36 chr10 61884286 61884341 -83704947 + L2 LINE L2 3210 3267 -5 3232 137 15 68 chr10 61884776 61885427 -83703861 - LTR8 LTR ERV1 -72 619 3 223 143 0 54 chr10 61885445 61885501 -83703787 + (TTCTC)n Simple_repeat Simple_repeat 5 57 0 1765 159 19 41 chr10 61885532 61886021 -83703267 + L1PA16 LINE L1 5811 6287 -10 210 71 0 0 chr10 61886110 61886138 -83703150 + (TA)n Simple_repeat Simple_repeat 1 28 0 * 234 0 0 0 chr10 61886137 61886163 -83703125 + (GA)n Simple_repeat Simple_repeat 2 27 0 306 0 0 0 chr10 61886194 61886228 -83703060 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2172 113 0 0 chr10 61886231 61886522 -83702766 - AluSx SINE Alu -21 291 1 761 116 8 0 chr10 61887837 61887958 -83701330 + L1MA5A LINE L1 6166 6287 -10 351 315 60 11 chr10 61888068 61888252 -83701036 + MIR SINE MIR 70 262 0 393 286 92 61 chr10 61888416 61888467 -83700821 - MIR SINE MIR -13 249 201 2247 130 14 25 chr10 61888467 61888835 -83700453 - THE1B LTR MaLR 0 364 1 393 286 92 61 chr10 61888835 61888979 -83700309 - MIR SINE MIR -61 201 48 939 103 7 44 chr10 61889014 61889150 -83700138 + FRAM SINE Alu 16 146 -30 2596 181 42 9 chr10 61889250 61889804 -83699484 + LTR49 LTR ERV1 1 572 -23 1956 192 30 127 chr10 61890155 61890549 -83698739 + LTR8 LTR ERV1 1 289 -402 863 137 0 0 chr10 61890549 61890666 -83698622 - FLAM_C SINE Alu -15 118 2 1956 192 30 127 chr10 61890666 61891026 -83698262 + LTR8 LTR ERV1 289 682 -9 581 195 126 38 chr10 61891441 61891600 -83697688 + MLT1B LTR MaLR 1 173 -217 411 119 0 0 chr10 61891619 61891686 -83697602 + (TC)n Simple_repeat Simple_repeat 2 68 0 754 258 25 10 chr10 61891707 61891905 -83697383 + MLT1B LTR MaLR 190 390 0 508 275 110 30 chr10 61892865 61893065 -83696223 + MIR SINE MIR 47 262 0 374 321 54 54 chr10 61893245 61893429 -83695859 - MIR SINE MIR -61 201 18 423 263 17 91 chr10 61894064 61894239 -83695049 + MER5B DNA MER1_type 1 162 -16 2858 3 0 0 chr10 61894659 61894968 -83694320 - AluYa5 SINE Alu -2 309 1 2320 48 37 7 chr10 61895188 61895483 -83693805 + AluY SINE Alu 1 304 -7 331 188 188 113 chr10 61895539 61895699 -83693589 + MER5B DNA MER1_type 1 172 -6 356 233 108 63 chr10 61895934 61896157 -83693131 - Charlie8 DNA MER1_type -1870 547 315 324 107 36 0 chr10 61897803 61897859 -83691429 - L1MB5 LINE L1 0 6174 6117 202 186 71 86 chr10 61898852 61898922 -83690366 - MER5B DNA MER1_type -11 167 99 411 21 0 0 chr10 61901303 61901351 -83687937 + (TG)n Simple_repeat Simple_repeat 2 49 0 2121 141 0 0 chr10 61901398 61901703 -83687585 - AluSx SINE Alu -7 305 1 275 221 52 0 chr10 61901721 61901798 -83687490 - MIR SINE MIR -11 251 171 419 360 40 13 chr10 61901855 61902083 -83687205 - MIR SINE MIR -3 259 26 6780 74 1 1 chr10 61902134 61903366 -83685922 + L1PA6 LINE L1 4923 6154 0 256 339 8 0 chr10 61903640 61903761 -83685527 + L1MC5 LINE L1 7324 7445 -516 249 248 19 105 chr10 61903765 61903870 -83685418 - MIR SINE MIR -161 101 6 216 97 0 0 chr10 61903933 61903964 -83685324 + (TA)n Simple_repeat Simple_repeat 1 31 0 309 290 59 65 chr10 61904489 61904658 -83684630 + MER5B DNA MER1_type 4 171 -7 1673 194 57 20 chr10 61905177 61905527 -83683761 + MLT1A1 LTR MaLR 1 363 -2 21 57 0 0 chr10 61908287 61908322 -83680966 + AT_rich Low_complexity Low_complexity 1 35 0 536 284 45 26 chr10 61908350 61908505 -83680783 - MIR3 SINE MIR -49 159 2 220 94 0 0 chr10 61908535 61908567 -83680721 - MIR SINE MIR -5 257 226 560 236 56 28 chr10 61908584 61908762 -83680526 + LTR41 LTR ERVL 1 183 -590 423 259 148 86 chr10 61909055 61909298 -83679990 + LTR41 LTR ERVL 510 767 -6 2024 62 4 16 chr10 61910160 61910417 -83678871 + AluY SINE Alu 2 255 -56 2179 109 0 0 chr10 61910774 61911097 -83678191 - AluSx SINE Alu 0 323 1 595 304 94 19 chr10 61911316 61911582 -83677706 - L2 LINE L2 -2 3270 2985 189 336 45 60 chr10 61911780 61911914 -83677374 + MIR SINE MIR 37 168 -94 372 273 133 0 chr10 61912137 61912182 -83677106 - MIR SINE MIR -59 203 165 195 100 0 0 chr10 61912182 61912212 -83677076 + (TTA)n Simple_repeat Simple_repeat 3 32 0 372 273 133 0 chr10 61912212 61912294 -83676994 - MIR SINE MIR -97 165 59 1905 145 26 20 chr10 61912959 61913310 -83675978 + MER39B LTR ERV1 301 653 0 419 310 43 50 chr10 61913467 61913578 -83675710 + MARNA DNA Mariner 287 397 -189 1556 189 7 11 chr10 61913578 61913894 -83675394 - AluJo SINE Alu 0 315 1 419 310 43 50 chr10 61913894 61914062 -83675226 + MARNA DNA Mariner 397 565 -21 2049 69 0 11 chr10 61914142 61914418 -83674870 + L1PA8 LINE L1 5894 6166 -6 497 239 90 19 chr10 61914539 61914694 -83674594 - MLT1K LTR MaLR -1 587 422 237 230 0 0 chr10 61914694 61914768 -83674520 + (TG)n Simple_repeat Simple_repeat 2 75 0 983 276 91 33 chr10 61914780 61915110 -83674178 - MLT1K LTR MaLR -184 404 56 1066 275 110 16 chr10 61915159 61915595 -83673693 - MLT1J LTR MaLR -34 477 1 1636 191 24 3 chr10 61916512 61916806 -83672482 - AluJo SINE Alu -12 300 1 981 50 0 0 chr10 61916964 61917085 -83672203 + L1PA6 LINE L1 6024 6144 -10 327 35 0 351 chr10 61917097 61917211 -83672077 + MADE1 DNA Mariner 1 74 -6 375 313 32 40 chr10 61917239 61917613 -83671675 + L1M4 LINE L1 2680 3050 -3096 261 215 38 25 chr10 61917699 61917778 -83671510 + L1ME LINE L1 5366 5445 -717 812 275 78 48 chr10 61917803 61918098 -83671190 - MLT1J LTR MaLR -205 306 3 1575 218 11 84 chr10 61919656 61919907 -83669381 + MLT1C LTR MaLR 25 226 -241 2388 94 41 8 chr10 61919907 61920270 -83669018 - THE1C LTR MaLR 0 375 1 1575 218 11 84 chr10 61920270 61920496 -83668792 + MLT1C LTR MaLR 226 467 0 867 248 62 12 chr10 61921318 61921560 -83667728 + MIR SINE MIR 6 259 -3 1260 180 83 80 chr10 61921963 61922324 -83666964 + MLT1A2 LTR MaLR 13 374 0 237 65 0 0 chr10 61922629 61922660 -83666628 + (TCC)n Simple_repeat Simple_repeat 1 31 0 697 253 119 16 chr10 61922923 61923117 -83666171 - MIR SINE MIR 0 262 49 520 194 0 28 chr10 61923397 61923505 -83665783 + MLT1B LTR MaLR 281 385 -5 24 91 0 0 chr10 61923642 61923708 -83665580 + AT_rich Low_complexity Low_complexity 1 66 0 332 164 90 139 chr10 61924903 61925025 -83664263 + MIR SINE MIR 79 194 -68 1423 196 31 8 chr10 61925514 61925774 -83663514 - AluJo SINE Alu -46 266 1 2142 187 19 94 chr10 61925867 61926396 -83662892 - MER82 DNA MER2_type -1 652 164 880 221 46 86 chr10 61926403 61926728 -83662560 - MER21A LTR ERV1 -140 791 480 611 151 36 7 chr10 61926926 61927065 -83662223 + CT-rich Low_complexity Low_complexity 1 143 0 1485 272 92 56 chr10 61927065 61927967 -83661321 - L2 LINE L2 -1 3312 2399 305 278 68 43 chr10 61928629 61928791 -83660497 - L1ME1 LINE L1 -7 6159 5994 1084 212 115 44 chr10 61928981 61929302 -83659986 + MER2 DNA MER2_type 1 344 0 261 0 0 0 chr10 61929336 61929365 -83659923 + (TCTG)n Simple_repeat Simple_repeat 2 30 0 323 242 193 0 chr10 61929468 61929562 -83659726 + MIR SINE MIR 45 155 -65 2240 245 56 53 chr10 61930548 61931674 -83657614 + L1ME1 LINE L1 5057 6332 -2 1187 231 33 40 chr10 61931669 61931823 -83657465 - L1M4 LINE L1 -1286 4860 4706 * 2155 125 0 0 chr10 61931823 61932119 -83657169 - AluSx SINE Alu -16 296 1 1187 231 33 40 chr10 61932119 61932362 -83656926 - L1M4 LINE L1 -1440 4706 4466 369 260 39 16 chr10 61932366 61932493 -83656795 + MER20B DNA MER1_type 650 779 -4 2295 278 136 70 chr10 61932514 61933063 -83656225 - L2 LINE L2 -1159 2155 1643 1627 181 3 20 chr10 61933063 61933355 -83655933 - AluJb SINE Alu -25 287 1 2295 278 136 70 chr10 61933355 61933779 -83655509 - L2 LINE L2 -1671 1643 1248 1228 133 58 25 chr10 61933779 61934020 -83655268 - L1PA16 LINE L1 -9 6157 5909 2295 278 136 70 chr10 61934020 61934690 -83654598 - L2 LINE L2 -2066 1248 404 335 280 51 51 chr10 61936047 61936222 -83653066 + MLT1H LTR MaLR 210 384 -165 193 167 0 28 chr10 61937153 61937189 -83652099 + MER5C DNA MER1_type 4 38 -286 22 35 0 0 chr10 61937243 61937272 -83652016 + AT_rich Low_complexity Low_complexity 1 29 0 243 0 0 0 chr10 61937728 61937755 -83651533 + (A)n Simple_repeat Simple_repeat 1 27 0 200 316 105 0 chr10 61937982 61938058 -83651230 + L2 LINE L2 3189 3272 0 249 340 43 0 chr10 61939203 61939297 -83649991 + L2 LINE L2 3211 3308 -5 33 66 0 0 chr10 61940108 61940169 -83649119 + AT_rich Low_complexity Low_complexity 1 61 0 2329 57 3 0 chr10 61943602 61943944 -83645344 + AluY SINE Alu 1 343 0 2533 68 0 0 chr10 61943952 61944263 -83645025 + AluY SINE Alu 1 311 0 2161 108 20 3 chr10 61944334 61944640 -83644648 + AluSx SINE Alu 1 311 -1 647 264 50 66 chr10 61945916 61946356 -83642932 + L1MB8 LINE L1 3764 4196 -1950 1985 135 0 0 chr10 61946720 61947002 -83642286 - AluSx SINE Alu -30 282 1 26 0 0 0 chr10 61947043 61947069 -83642219 + AT_rich Low_complexity Low_complexity 1 26 0 849 111 0 0 chr10 61947414 61947549 -83641739 - L1MA4A LINE L1 -6 6297 6163 9767 102 40 53 chr10 61947794 61948976 -83640312 + Tigger1 DNA MER2_type 1 1197 -1221 1642 133 25 63 chr10 61948976 61949261 -83640027 + AluJo SINE Alu 29 302 -10 9767 102 40 53 chr10 61949261 61949917 -83639371 + Tigger1 DNA MER2_type 1197 1799 -619 2030 121 7 3 chr10 61949917 61950199 -83639089 - AluJb SINE Alu -29 283 1 9767 102 40 53 chr10 61950199 61950663 -83638625 + Tigger1 DNA MER2_type 1799 2268 -150 802 223 7 0 chr10 61950665 61950813 -83638475 + AluJo SINE Alu 3 151 -161 2256 165 127 25 chr10 61950998 61951095 -83638193 + L1MB8 LINE L1 4615 4701 -1479 1799 173 0 17 chr10 61951095 61951415 -83637873 + AluJo SINE Alu 1 312 0 2256 165 127 25 chr10 61951415 61952172 -83637116 + L1MB8 LINE L1 4701 5566 -614 1303 153 16 32 chr10 61952172 61952418 -83636870 + L1PB3 LINE L1 5906 6149 -5 2568 183 27 25 chr10 61952443 61953071 -83636217 + L1MB8 LINE L1 5550 6178 0 3796 114 53 24 chr10 61953220 61953586 -83635702 - L1PB2 LINE L1 -3 6148 5753 2123 93 0 7 chr10 61953586 61953866 -83635422 - AluY SINE Alu -13 298 21 3796 114 53 24 chr10 61953866 61954138 -83635150 - L1PB2 LINE L1 -398 5753 5491 967 173 25 5 chr10 61954138 61954340 -83634948 - L1 LINE L1 -3516 2630 2425 * 1233 96 83 9 chr10 61954325 61954528 -83634760 - L1PBa LINE L1 -4545 2318 2097 2419 68 0 0 chr10 61954528 61954823 -83634465 - AluY SINE Alu -16 295 1 1233 96 83 9 chr10 61954823 61954837 -83634451 - L1PBa LINE L1 -4766 2097 2085 * 7929 176 30 7 chr10 61954835 61957566 -83631722 - L1PBa LINE L1 -5009 1854 1 2244 119 0 3 chr10 61957774 61958076 -83631212 - AluSx SINE Alu -11 301 1 1256 103 68 188 chr10 61958158 61958509 -83630779 + AluJb SINE Alu 1 309 -3 1207 341 96 35 chr10 61959738 61959986 -83629302 - L2 LINE L2 -958 2356 2124 2354 80 3 10 chr10 61959986 61960299 -83628989 + AluY SINE Alu 1 311 0 1207 341 96 35 chr10 61960299 61961041 -83628247 - L2 LINE L2 -1190 2124 1306 693 277 41 84 chr10 61961443 61961930 -83627358 + MLT1H LTR MaLR 19 484 -65 1960 150 3 7 chr10 61961999 61962293 -83626995 - AluJb SINE Alu -19 293 1 181 261 36 81 chr10 61962475 61962586 -83626702 - L2 LINE L2 0 3313 3208 25 51 0 0 chr10 61963264 61963303 -83625985 + AT_rich Low_complexity Low_complexity 1 39 0 1846 168 10 0 chr10 61963440 61963732 -83625556 - AluSx SINE Alu -17 295 1 198 0 0 0 chr10 61963740 61963762 -83625526 + (T)n Simple_repeat Simple_repeat 1 22 0 2440 78 3 0 chr10 61963990 61964296 -83624992 + AluSp SINE Alu 1 307 -6 390 301 128 5 chr10 61966221 61966440 -83622848 - MER112 DNA MER1_type -3 257 12 209 216 20 0 chr10 61966771 61966822 -83622466 + GA-rich Low_complexity Low_complexity 1 52 0 517 277 130 5 chr10 61967059 61967243 -83622045 + MIR SINE MIR 51 257 -5 204 174 65 0 chr10 61967303 61967349 -83621939 - L2 LINE L2 -64 3249 3201 378 279 43 14 chr10 61967811 61967951 -83621337 + L2 LINE L2 1225 1368 -1946 1735 171 3 51 chr10 61968139 61968320 -83620968 - AluJo SINE Alu -9 303 142 2347 115 0 0 chr10 61968320 61968632 -83620656 - AluSx SINE Alu 0 312 1 1735 171 3 51 chr10 61968632 61968766 -83620522 - AluJo SINE Alu -170 142 3 187 400 17 0 chr10 61968780 61968840 -83620448 + L3b LINE CR1 1479 1539 -44 2154 66 0 14 chr10 61969454 61969743 -83619545 + L1PB1 LINE L1 5866 6150 -1 1877 138 63 30 chr10 61970251 61970614 -83618674 + THE1C LTR MaLR 1 375 0 715 160 0 0 chr10 61971042 61971167 -83618121 + L1MB7 LINE L1 6052 6176 -8 207 171 0 0 chr10 61972579 61972614 -83616674 + GA-rich Low_complexity Low_complexity 3 37 0 427 343 11 11 chr10 61972845 61973020 -83616268 + MER5A DNA MER1_type 6 180 -9 1428 220 22 12 chr10 61973871 61974280 -83615008 + LTR37A LTR ERV1 14 426 0 303 252 150 54 chr10 61974797 61974944 -83614344 + L1MC4a LINE L1 5816 5976 -1832 430 192 13 80 chr10 61975059 61975105 -83614183 + L1MEd LINE L1 2 49 -6070 2083 93 0 0 chr10 61975105 61975373 -83613915 - AluY SINE Alu 0 311 44 430 192 13 80 chr10 61975373 61975477 -83613811 + L1MEd LINE L1 49 142 -5977 362 287 30 49 chr10 61975557 61975721 -83613567 + HAL1 LINE L1 469 629 -1878 2213 104 0 23 chr10 61975857 61976164 -83613124 + AluSx SINE Alu 1 300 -12 201 178 0 22 chr10 61976260 61976305 -83612983 + GA-rich Low_complexity Low_complexity 3 46 0 35698 83 15 7 chr10 61976305 61982410 -83606878 + L1PA6 LINE L1 1 6154 0 1873 164 0 10 chr10 61982516 61982809 -83606479 - AluSx SINE Alu -17 295 6 466 270 78 32 chr10 61982834 61983179 -83606109 + L1M4 LINE L1 3588 3948 -2198 1060 138 5 51 chr10 61983206 61983401 -83605887 + AluJb SINE Alu 1 186 -126 1483 167 4 34 chr10 61983409 61983672 -83605616 + AluJb SINE Alu 41 295 -17 274 179 194 0 chr10 61983711 61983778 -83605510 + LTR33 LTR ERVL 40 119 -402 277 281 287 0 chr10 61983887 61984054 -83605234 + LTR33 LTR ERVL 307 521 0 434 279 57 13 chr10 61984120 61984278 -83605010 - MER112 DNA MER1_type -94 166 2 230 329 100 0 chr10 61984889 61984959 -83604329 + MER91A DNA MER1_type 7 83 -113 489 231 0 0 chr10 61985240 61985344 -83603944 - U13 snRNA snRNA 0 104 1 1528 170 61 22 chr10 61985461 61985738 -83603550 + AluJo SINE Alu 1 288 -24 243 308 47 35 chr10 61986619 61987044 -83602244 + L1MEd LINE L1 709 1138 -4981 698 281 138 21 chr10 61987085 61987598 -83601690 + L1MCc LINE L1 25 597 -5826 1733 258 52 35 chr10 61987701 61988109 -83601179 + L1MCc LINE L1 743 1143 -5519 1439 216 38 30 chr10 61988109 61988480 -83600808 - MLT1A2 LTR MaLR 0 374 1 1733 258 52 35 chr10 61988480 61988818 -83600470 + L1MCc LINE L1 1143 1507 -5155 1923 86 0 12 chr10 61988818 61989073 -83600215 + AluY SINE Alu 60 311 0 1733 258 52 35 chr10 61989073 61989316 -83599972 + L1MCc LINE L1 1507 1744 -4918 1890 138 165 5 chr10 61989341 61989710 -83599578 + MSTA LTR MaLR 1 428 0 574 229 17 0 chr10 61989710 61989859 -83599429 + L1MB2 LINE L1 5646 5808 -313 204 167 37 37 chr10 61989865 61989919 -83599369 + (TATATG)n Simple_repeat Simple_repeat 3 56 0 7353 78 6 205 chr10 61989953 61991642 -83597646 + SVA Other Other 34 1386 0 33 25 0 0 chr10 61991642 61991682 -83597606 + AT_rich Low_complexity Low_complexity 1 40 0 948 178 70 13 chr10 61991683 61991913 -83597375 + L1MB2 LINE L1 5814 6056 -115 1955 151 0 0 chr10 61991927 61992218 -83597070 + AluSg SINE Alu 13 303 -7 11727 32 0 1 chr10 61992226 61994403 -83594885 + L1PA3 LINE L1 3979 6155 0 278 265 154 0 chr10 61994621 61994757 -83594531 - L1ME4a LINE L1 -4 6117 5961 24 85 0 0 chr10 61994757 61994816 -83594472 + AT_rich Low_complexity Low_complexity 1 59 0 422 170 132 0 chr10 61994816 61994922 -83594366 + L1MB2 LINE L1 6050 6169 -2 4312 141 40 5 chr10 61995001 61995784 -83593504 - L1MA4 LINE L1 -7 6497 5688 807 207 13 0 chr10 61995817 61995967 -83593321 - FRAM SINE Alu -25 151 1 6742 170 55 13 chr10 61995972 61996996 -83592292 - L1MA4 LINE L1 -743 5607 4572 183 42 0 0 chr10 61996996 61997020 -83592268 + (TTG)n Simple_repeat Simple_repeat 2 25 0 6742 170 55 13 chr10 61997020 61997593 -83591695 - L1MA4 LINE L1 -1778 4572 4025 3702 221 44 42 chr10 61997614 61999024 -83590264 - L1MA4 LINE L1 -3027 3323 1916 731 186 0 13 chr10 61999024 61999180 -83590108 - L1PA15 LINE L1 0 6165 6012 2152 136 3 0 chr10 61999185 61999495 -83589793 - AluSx SINE Alu -1 311 1 3702 221 44 42 chr10 61999495 61999582 -83589706 - L1MA4 LINE L1 -4437 1913 1828 2230 135 49 0 chr10 61999582 61999929 -83589359 + THE1B LTR MaLR 1 364 0 3702 221 44 42 chr10 61999929 62000030 -83589258 - L1MA4 LINE L1 -4522 1828 1729 1966 126 16 31 chr10 62000030 62000347 -83588941 + AluSx SINE Alu 1 312 0 3702 221 44 42 chr10 62000347 62001296 -83587992 - L1MA4 LINE L1 -4621 1729 1094 609 341 46 26 chr10 62001753 62002210 -83587078 - L1MA4 LINE L1 -5813 468 3 1530 204 12 35 chr10 62002287 62002342 -83586946 + AluJb SINE Alu 1 56 -256 5269 158 30 31 chr10 62002342 62003412 -83585876 + MER11C LTR ERVK 1 1069 -2 1530 204 12 35 chr10 62003412 62003675 -83585613 + AluJb SINE Alu 56 312 0 2214 129 0 0 chr10 62003796 62004107 -83585181 + AluSx SINE Alu 1 311 -1 232 313 9 0 chr10 62004136 62004248 -83585040 + L1MC4a LINE L1 1289 1401 -4983 1786 223 93 55 chr10 62004275 62004612 -83584676 + L1MC4a LINE L1 2491 2814 -3568 2270 97 3 3 chr10 62004612 62004911 -83584377 + AluSg SINE Alu 1 299 -11 1786 223 93 55 chr10 62004911 62005494 -83583794 + L1MC4a LINE L1 2814 3446 -2936 2690 235 162 18 chr10 62005533 62006044 -83583244 + L1MC4 LINE L1 6468 6904 -1138 297 0 0 0 chr10 62006044 62006077 -83583211 + (TGAA)n Simple_repeat Simple_repeat 3 35 0 2690 235 162 18 chr10 62006077 62006134 -83583154 + L1MC4 LINE L1 6904 6951 -1091 1796 174 0 22 chr10 62006134 62006445 -83582843 + AluJb SINE Alu 1 304 -8 2690 235 162 18 chr10 62006445 62006972 -83582316 + L1MC4 LINE L1 6951 7722 -320 692 247 36 18 chr10 62006976 62007251 -83582037 + L1MC4 LINE L1 7762 8041 -1 * 836 230 82 6 chr10 62007243 62007560 -83581728 + L1MC4a LINE L1 4594 4934 -1448 2745 265 98 51 chr10 62007695 62008165 -83581123 + L1MC4a LINE L1 6048 6495 -1549 1913 103 71 0 chr10 62008165 62008446 -83580842 - AluSg SINE Alu -9 301 1 2745 265 98 51 chr10 62008446 62008505 -83580783 + L1MC4a LINE L1 6495 6550 -1494 2566 66 0 3 chr10 62008505 62008839 -83580449 + L1PA6 LINE L1 5822 6154 0 2745 265 98 51 chr10 62008839 62009686 -83579602 + L1MC4a LINE L1 6550 7533 -511 1881 158 3 10 chr10 62009686 62009821 -83579467 + AluJo SINE Alu 1 135 -177 2147 111 7 10 chr10 62009821 62010118 -83579170 + AluSx SINE Alu 1 296 -16 1881 158 3 10 chr10 62010118 62010285 -83579003 + AluJo SINE Alu 135 301 -11 2745 265 98 51 chr10 62010285 62010723 -83578565 + L1MC4a LINE L1 7533 7949 -95 572 207 59 0 chr10 62010723 62010858 -83578430 + L1MC4 LINE L1 8044 8186 -92 232 156 0 0 chr10 62010860 62010905 -83578383 + L1MC4 LINE L1 8225 8269 -9 226 294 8 25 chr10 62011221 62011340 -83577948 + L1ME LINE L1 5683 5799 -322 220 339 158 0 chr10 62012731 62012858 -83576430 - L2 LINE L2 -1 3271 3125 310 287 78 96 chr10 62014415 62014760 -83574528 + L1M2 LINE L1 524 862 -5987 738 200 0 52 chr10 62017458 62017613 -83571675 - FRAM SINE Alu -24 152 6 2664 10 0 3 chr10 62017626 62017922 -83571366 - AluYa5 SINE Alu -16 295 1 2260 95 0 7 chr10 62019219 62019515 -83569773 + AluSg SINE Alu 1 294 -16 304 216 216 0 chr10 62019516 62019618 -83569670 + L1MC5 LINE L1 7785 7908 -53 207 0 0 0 chr10 62019671 62019694 -83569594 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2439 91 3 0 chr10 62020434 62020741 -83568547 + AluSx SINE Alu 1 308 -4 234 0 0 0 chr10 62021023 62021049 -83568239 + (T)n Simple_repeat Simple_repeat 1 26 0 42 36 0 0 chr10 62022902 62022958 -83566330 + AT_rich Low_complexity Low_complexity 1 56 0 21 0 0 0 chr10 62023214 62023235 -83566053 + AT_rich Low_complexity Low_complexity 1 21 0 1055 118 13 0 chr10 62024005 62024158 -83565130 - AluSg/x SINE Alu -15 295 141 1473 151 46 49 chr10 62024838 62025154 -83564134 + AluJb SINE Alu 1 315 0 1030 157 0 40 chr10 62025295 62025493 -83563795 + Tigger4(Zombi) DNA MER2_type 1 190 -2541 2631 146 5 2 chr10 62025494 62025939 -83563349 + Tigger4(Zombi) DNA MER2_type 2257 2702 -29 773 154 0 0 chr10 62026432 62026549 -83562739 + AluJb SINE Alu 1 117 -195 213 368 157 19 chr10 62026851 62027392 -83561896 - L2 LINE L2 -703 2611 1996 2165 133 7 0 chr10 62028542 62028844 -83560444 - AluSx SINE Alu -8 304 1 1849 129 44 32 chr10 62028868 62029208 -83560080 + MER2 DNA MER2_type 1 344 0 897 219 0 7 chr10 62030676 62030882 -83558406 + AluJb SINE Alu 2 246 -66 2700 45 0 0 chr10 62032506 62032817 -83556471 + AluY SINE Alu 1 311 0 1899 114 111 0 chr10 62033523 62033803 -83555485 - AluSq SINE Alu -2 311 1 183 258 227 10 chr10 62036745 62036842 -83552446 + MIR3 SINE MIR 77 194 -14 336 318 0 0 chr10 62038596 62038681 -83550607 + L2 LINE L2 3188 3272 0 199 347 67 0 chr10 62039131 62039206 -83550082 + MIR SINE MIR 25 104 -158 1316 180 99 42 chr10 62039211 62039616 -83549672 + MLT2C2 LTR ERVL 3 430 -34 1014 159 20 108 chr10 62039933 62040229 -83549059 - LTR23 LTR ERV1 -7 430 161 703 148 27 47 chr10 62040302 62040352 -83548936 - LTR23 LTR ERV1 -286 151 102 2032 129 32 30 chr10 62040352 62040724 -83548564 - THE1C LTR MaLR -2 373 1 703 148 27 47 chr10 62040724 62040822 -83548466 - LTR23 LTR ERV1 -335 102 6 260 215 291 13 chr10 62040826 62040905 -83548383 - L2 LINE L2 -21 3251 3151 3746 160 94 54 chr10 62041369 62041601 -83547687 + MER4D LTR ERV1 1 222 -650 1822 115 82 4 chr10 62041601 62041870 -83547418 + AluSx SINE Alu 1 290 -22 3746 160 94 54 chr10 62041870 62042475 -83546813 + MER4D LTR ERV1 222 872 0 2116 118 0 29 chr10 62042621 62042934 -83546354 + AluSx SINE Alu 1 304 -8 961 43 0 17 chr10 62043116 62043232 -83546056 + AluY SINE Alu 21 134 -177 9611 30 0 0 chr10 62043232 62044430 -83544858 - L1PA3 LINE L1 -1105 5041 3844 7602 29 5 0 chr10 62044431 62045549 -83543739 + L1PA3 LINE L1 5031 6152 -3 29 0 0 0 chr10 62045549 62045578 -83543710 + AT_rich Low_complexity Low_complexity 1 29 0 1469 36 0 0 chr10 62045578 62045746 -83543542 + AluY SINE Alu 128 295 -16 2091 104 38 0 chr10 62046964 62047252 -83542036 - AluSx SINE Alu -13 299 1 330 297 102 16 chr10 62047679 62047807 -83541481 - MIR SINE MIR -50 212 74 549 293 33 33 chr10 62048975 62049190 -83540098 + MIR SINE MIR 48 262 0 21 0 0 0 chr10 62049991 62050012 -83539276 + AT_rich Low_complexity Low_complexity 1 21 0 254 93 37 19 chr10 62050474 62050528 -83538760 + CT-rich Low_complexity Low_complexity 4 180 0 1294 182 9 9 chr10 62050528 62050759 -83538529 - AluJb SINE Alu 0 366 82 311 290 65 11 chr10 62050980 62051073 -83538215 - L2 LINE L2 -25 3247 3150 297 239 114 0 chr10 62051282 62051370 -83537918 + Charlie8 DNA MER1_type 85 182 -2235 279 196 47 28 chr10 62051419 62051526 -83537762 - MER113 DNA MER1_type? -378 143 35 341 274 104 33 chr10 62051682 62051923 -83537365 - L1M4 LINE L1 -3742 2404 2147 243 0 0 0 chr10 62052112 62052139 -83537149 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1839 127 8 8 chr10 62052150 62052418 -83536870 - AluSx SINE Alu -44 268 1 991 229 280 47 chr10 62052529 62052975 -83536313 - L2 LINE L2 -337 2977 2428 411 286 105 68 chr10 62053107 62053516 -83535772 + L1M4 LINE L1 4799 5222 -924 420 348 78 41 chr10 62053627 62053946 -83535342 + HAL1 LINE L1 261 591 -1916 258 268 0 21 chr10 62054066 62054163 -83535125 + HAL1 LINE L1 818 912 -1595 26 0 0 0 chr10 62054263 62054289 -83534999 + AT_rich Low_complexity Low_complexity 1 26 0 762 172 0 16 chr10 62054376 62054504 -83534784 + FLAM_A SINE Alu 1 126 -7 473 329 47 5 chr10 62054832 62055254 -83534034 + L1ME LINE L1 4407 4846 -1300 493 263 17 104 chr10 62055266 62055395 -83533893 + L1ME LINE L1 4922 5012 -1134 2005 161 0 3 chr10 62055395 62055699 -83533589 + AluSx SINE Alu 1 303 -9 493 263 17 104 chr10 62055699 62055866 -83533422 + L1ME LINE L1 5012 5192 -954 616 251 154 59 chr10 62055870 62056048 -83533240 + L1ME LINE L1 5264 5424 -740 2339 131 81 0 chr10 62056048 62056444 -83532844 + MSTA LTR MaLR 1 428 0 616 251 154 59 chr10 62056444 62056772 -83532516 + L1ME LINE L1 5424 5818 -346 2857 97 16 11 chr10 62056789 62057234 -83532054 + L1MA2 LINE L1 5858 6304 0 394 312 0 18 chr10 62058213 62058322 -83530966 - MIR SINE MIR -137 125 19 2049 135 0 3 chr10 62058322 62058653 -83530635 + AluSx SINE Alu 1 330 0 1568 195 114 108 chr10 62058731 62058819 -83530469 - MLT1E LTR MaLR 0 593 507 2626 135 11 28 chr10 62058819 62059277 -83530011 - L1PA16 LINE L1 -1 6165 5716 1568 195 114 108 chr10 62059277 62059579 -83529709 - MLT1E LTR MaLR -86 507 196 1827 104 13 30 chr10 62059579 62059878 -83529410 + L1MA2 LINE L1 6005 6298 -6 1568 195 114 108 chr10 62059878 62060076 -83529212 - MLT1E LTR MaLR -397 196 1 212 347 133 27 chr10 62060333 62060483 -83528805 + L2 LINE L2 3102 3267 -5 335 330 34 8 chr10 62060569 62060687 -83528601 + L3 LINE CR1 1281 1401 -176 182 297 54 27 chr10 62060748 62060822 -83528466 + L3 LINE CR1 1501 1576 -1 553 278 54 42 chr10 62061971 62062306 -83526982 + L1MC4a LINE L1 5568 5906 -1902 333 226 131 65 chr10 62062952 62063120 -83526168 + MIR SINE MIR 21 199 -63 366 269 54 58 chr10 62063311 62063605 -83525683 - MER97c DNA MER1_type? -28 1062 770 846 239 78 15 chr10 62064402 62064670 -83524618 - MER97a DNA MER1_type? -384 510 226 606 132 0 18 chr10 62064670 62064784 -83524504 + L1MB8 LINE L1 6043 6154 -24 410 259 218 15 chr10 62064791 62064988 -83524300 - MER97a DNA MER1_type? -657 237 1 237 230 16 16 chr10 62065199 62065275 -83524013 + CT-rich Low_complexity Low_complexity 1 76 0 2272 90 3 23 chr10 62065819 62066129 -83523159 - AluSg SINE Alu -6 304 1 677 135 0 0 chr10 62066187 62066291 -83522997 - L1PA10 LINE L1 0 6168 6065 372 43 0 0 chr10 62066576 62066622 -83522666 + (TG)n Simple_repeat Simple_repeat 2 47 0 303 300 30 10 chr10 62066704 62066804 -83522484 + MIR SINE MIR 69 170 -92 2452 147 52 2 chr10 62066842 62067250 -83522038 - MSTC LTR MaLR 0 428 1 1835 232 45 54 chr10 62067304 62067855 -83521433 + MLT2B3 LTR ERVL 1 546 -8 216 266 0 0 chr10 62067855 62067919 -83521369 + MIR SINE MIR 147 210 -52 268 290 0 6 chr10 62068048 62068180 -83521108 - MLT1F LTR MaLR -67 528 309 2508 190 26 66 chr10 62068217 62068808 -83520480 - L1ME1 LINE L1 0 6166 5608 748 192 0 8 chr10 62068808 62068938 -83520350 - FLAM_A SINE Alu -4 129 1 2508 190 26 66 chr10 62068938 62069072 -83520216 - L1ME1 LINE L1 -558 5608 5470 1997 148 14 11 chr10 62069079 62069445 -83519843 - L1MB2 LINE L1 0 6171 5805 2181 104 7 0 chr10 62070049 62070348 -83518940 + AluY SINE Alu 2 302 -9 1839 138 18 64 chr10 62070549 62070592 -83518696 - AluSx SINE Alu 0 312 269 198 0 0 0 chr10 62070592 62070614 -83518674 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 1839 138 18 64 chr10 62070614 62070897 -83518391 - AluSx SINE Alu -43 269 1 32 0 0 0 chr10 62071150 62071182 -83518106 + AT_rich Low_complexity Low_complexity 1 32 0 1825 143 7 36 chr10 62071185 62071550 -83517738 - AluSx SINE Alu 0 376 21 1502 173 20 70 chr10 62074169 62074490 -83514798 - L1MB7 LINE L1 -7 6177 5874 343 196 262 28 chr10 62074490 62074597 -83514691 - FLAM_A SINE Alu -1 132 1 1502 173 20 70 chr10 62074597 62074633 -83514655 - L1MB7 LINE L1 -310 5874 5838 3398 112 10 0 chr10 62074633 62075124 -83514164 - MER1A DNA MER1_type 0 529 34 3077 167 25 0 chr10 62075129 62075770 -83513518 - L1MB7 LINE L1 -326 5852 5197 241 107 18 36 chr10 62075775 62075831 -83513457 + (TTCCC)n Simple_repeat Simple_repeat 3 57 0 1653 170 3 28 chr10 62075837 62076119 -83513169 - AluJo SINE Alu -37 275 1 195 290 16 0 chr10 62076710 62076772 -83512516 + L3b LINE CR1 1140 1202 -381 409 326 103 13 chr10 62076791 62077015 -83512273 - MIR SINE MIR -6 256 13 503 266 208 0 chr10 62077234 62077388 -83511900 - MER5A DNA MER1_type 0 189 4 1689 222 145 25 chr10 62077437 62077914 -83511374 + MLT1F LTR MaLR 1 534 -8 190 256 0 0 chr10 62079425 62079464 -83509824 - MER5A DNA MER1_type -97 92 54 306 259 139 28 chr10 62079482 62079590 -83509698 + L2 LINE L2 3145 3264 -8 2115 133 0 0 chr10 62079740 62080034 -83509254 - AluSx SINE Alu -18 294 1 205 193 35 70 chr10 62080297 62080354 -83508934 - MIR SINE MIR -65 143 89 250 307 26 44 chr10 62080357 62080471 -83508817 + MER5A DNA MER1_type 5 116 -73 341 243 223 0 chr10 62080512 62080615 -83508673 - MER5A DNA MER1_type -1 188 63 1132 152 43 5 chr10 62080624 62080835 -83508453 - L1PA16 LINE L1 -1 6165 5947 336 0 0 0 chr10 62080835 62080874 -83508414 + THE1B LTR MaLR 2 40 -324 22 0 0 0 chr10 62081502 62081524 -83507764 + GC_rich Low_complexity Low_complexity 1 22 0 438 175 211 26 chr10 62083412 62083526 -83505762 - AluJo SINE Alu -177 135 1 2105 119 3 3 chr10 62084436 62084729 -83504559 - AluSx SINE Alu -19 293 1 243 0 0 0 chr10 62085342 62085369 -83503919 + (ATGTG)n Simple_repeat Simple_repeat 4 30 0 2009 153 0 0 chr10 62085693 62085988 -83503300 - AluSx SINE Alu -17 295 1 687 290 24 8 chr10 62086149 62086359 -83502929 - MIR SINE MIR -46 216 11 834 175 18 48 chr10 62086596 62086825 -83502463 + Charlie5 DNA MER1_type 2275 2496 -116 193 243 0 0 chr10 62086840 62086877 -83502411 + MIR SINE MIR 114 150 -58 458 213 31 16 chr10 62087272 62087399 -83501889 - Charlie5 DNA MER1_type 0 2624 2496 739 201 35 55 chr10 62089169 62089398 -83499890 - L1M4 LINE L1 -3167 2979 2754 2136 87 4 11 chr10 62089398 62089675 -83499613 - AluSq SINE Alu 0 313 39 739 201 35 55 chr10 62089675 62089699 -83499589 - L1M4 LINE L1 -3392 2754 2731 494 224 102 0 chr10 62089905 62090052 -83499236 - MER112 DNA MER1_type -98 162 1 308 261 18 18 chr10 62090092 62090203 -83499085 + (CATA)n Simple_repeat Simple_repeat 2 112 0 232 303 145 14 chr10 62090902 62091047 -83498241 + MIR3 SINE MIR 15 178 -30 2099 141 0 3 chr10 62091442 62091747 -83497541 - AluSx SINE Alu -8 304 1 1767 164 11 14 chr10 62091773 62092059 -83497229 + AluJo SINE Alu 2 286 -26 2360 96 0 3 chr10 62092593 62092894 -83496394 - AluSx SINE Alu -12 300 1 259 310 206 25 chr10 62093205 62093486 -83495802 - L2 LINE L2 -433 2881 2550 196 254 90 15 chr10 62093841 62093908 -83495380 - L2 LINE L2 -818 2496 2425 2312 110 0 3 chr10 62094222 62094531 -83494757 - AluSq SINE Alu -5 308 1 197 175 0 138 chr10 62095448 62095528 -83493760 + L2 LINE L2 3159 3227 -86 25 31 0 0 chr10 62095786 62095818 -83493470 + AT_rich Low_complexity Low_complexity 1 32 0 2028 232 103 34 chr10 62096276 62097334 -83491954 - L1ME3A LINE L1 -50 6120 4974 7133 127 27 18 chr10 62097334 62098553 -83490735 - Tigger3b DNA MER2_type -1 1230 1 2028 232 103 34 chr10 62098553 62098635 -83490653 - L1ME3A LINE L1 -1196 4974 4899 629 189 0 38 chr10 62099053 62099185 -83490103 + FLAM_A SINE Alu 4 130 -3 185 355 91 55 chr10 62100515 62100625 -83488663 - L2 LINE L2 -22 3250 3137 563 242 15 91 chr10 62100637 62100835 -83488453 - MIR SINE MIR -10 252 70 1656 171 38 94 chr10 62100977 62101152 -83488136 - Charlie1b DNA MER1_type -2240 521 338 1850 135 57 17 chr10 62101152 62101449 -83487839 + AluSg SINE Alu 1 309 -1 1656 171 38 94 chr10 62101449 62101804 -83487484 - Charlie1b DNA MER1_type -2423 338 21 236 343 189 3 chr10 62101854 62102244 -83487044 - L2 LINE L2 -493 2821 2346 1160 196 67 23 chr10 62102271 62102588 -83486700 - L1MD3 LINE L1 -18 7977 7555 22 35 0 0 chr10 62102645 62102674 -83486614 + AT_rich Low_complexity Low_complexity 1 29 0 1066 254 132 36 chr10 62102741 62103300 -83485988 - L1ME4a LINE L1 -3 6118 5506 27 0 0 0 chr10 62104617 62104644 -83484644 + AT_rich Low_complexity Low_complexity 1 27 0 398 316 107 25 chr10 62105093 62105289 -83483999 - MIR SINE MIR -14 248 37 962 194 0 0 chr10 62105342 62105507 -83483781 - FRAM SINE Alu 0 166 2 192 97 0 0 chr10 62105597 62105628 -83483660 + (A)n Simple_repeat Simple_repeat 1 31 0 732 224 11 0 chr10 62105797 62105971 -83483317 + MER104 DNA Tc2 1 176 -4 279 340 239 0 chr10 62106011 62106208 -83483080 + L2 LINE L2 2193 2436 -878 362 320 73 7 chr10 62106233 62106383 -83482905 + MIR SINE MIR 44 203 -59 313 306 143 40 chr10 62106410 62106869 -83482419 + L2 LINE L2 2460 3073 -199 225 294 29 0 chr10 62106933 62107001 -83482287 - MIR SINE MIR -81 127 58 207 200 0 60 chr10 62107010 62107060 -83482228 + A-rich Low_complexity Low_complexity 2 48 0 1746 124 34 37 chr10 62107222 62107520 -83481768 + AluJo SINE Alu 1 297 -15 209 234 195 13 chr10 62110628 62110705 -83478583 - L2 LINE L2 -8 3264 3174 184 295 57 76 chr10 62111123 62111228 -83478060 + L2 LINE L2 3201 3303 -10 728 128 34 0 chr10 62111772 62111889 -83477399 + FLAM_C SINE Alu 3 123 -20 286 231 10 14 chr10 62112881 62112985 -83476303 + MIR SINE MIR 117 260 -2 30 69 0 0 chr10 62113152 62113210 -83476078 + AT_rich Low_complexity Low_complexity 1 58 0 941 198 139 32 chr10 62113210 62113462 -83475826 - AluJo SINE Alu -31 281 3 180 0 0 0 chr10 62113884 62113904 -83475384 + (TG)n Simple_repeat Simple_repeat 2 21 0 21 0 0 0 chr10 62114281 62114302 -83474986 + AT_rich Low_complexity Low_complexity 1 21 0 1417 237 96 41 chr10 62119210 62119699 -83469589 - MER68 LTR ERV1 -23 539 24 1249 210 93 3 chr10 62119703 62120037 -83469251 - L1MEc LINE L1 -1234 4981 4618 1286 251 190 12 chr10 62120038 62120523 -83468765 - MLT1G LTR MaLR 0 590 20 3952 260 122 38 chr10 62120630 62123114 -83466174 - L1MEc LINE L1 -1676 4539 1885 755 264 69 10 chr10 62123135 62123423 -83465865 - L1MEc LINE L1 -4580 1816 1512 1385 111 0 5 chr10 62123433 62123623 -83465665 - AluSg/x SINE Alu -14 298 110 1689 149 168 8 chr10 62123875 62124244 -83465044 + MSTA LTR MaLR 1 428 0 574 197 30 15 chr10 62124262 62124394 -83464894 + L1MB2 LINE L1 5675 5808 -360 204 167 37 37 chr10 62124400 62124454 -83464834 + (TATATG)n Simple_repeat Simple_repeat 3 56 0 6811 82 6 221 chr10 62124490 62126256 -83463032 + SVA Other Other 36 1430 0 380 155 42 0 chr10 62126257 62126328 -83462960 + L1MB2 LINE L1 5814 5887 -284 553 129 0 0 chr10 62126329 62126414 -83462874 + AluS SINE Alu 221 305 -5 3706 71 6 0 chr10 62126422 62126928 -83462360 + L1P LINE L1 3979 4487 -1659 843 136 0 41 chr10 62128181 62128328 -83460960 + AluJb SINE Alu 157 297 -15 26 30 0 0 chr10 62131247 62131280 -83458008 + AT_rich Low_complexity Low_complexity 1 33 0 22 56 0 0 chr10 62131448 62131484 -83457804 + AT_rich Low_complexity Low_complexity 1 36 0 263 188 0 43 chr10 62131909 62131978 -83457310 - HAL1 LINE L1 -163 2344 2279 616 84 0 0 chr10 62132144 62132227 -83457061 - AluSg1 SINE Alu -226 83 1 1262 238 59 3 chr10 62132227 62132547 -83456741 - HAL1 LINE L1 -2133 374 37 1765 174 3 26 chr10 62132554 62132859 -83456429 + AluJb SINE Alu 1 298 -14 286 333 13 0 chr10 62132860 62132935 -83456353 - MIR3 SINE MIR -54 154 79 1142 213 137 3 chr10 62134913 62135213 -83454075 + MER58B DNA MER1_type 2 341 0 457 180 0 30 chr10 62136020 62136120 -83453168 + MER105 DNA DNA 85 181 -23 27 29 0 0 chr10 62136465 62136499 -83452789 + AT_rich Low_complexity Low_complexity 1 34 0 270 81 0 0 chr10 62136698 62136735 -83452553 + (TG)n Simple_repeat Simple_repeat 2 38 0 1405 170 52 30 chr10 62136736 62137007 -83452281 - AluJo SINE Alu -35 277 1 903 185 19 12 chr10 62137021 62137183 -83452105 - AluJb SINE Alu -21 291 129 819 158 8 0 chr10 62139213 62139346 -83449942 + FLAM_A SINE Alu 6 139 -3 3396 204 49 2 chr10 62139744 62140641 -83448647 - L1M4 LINE L1 -679 5499 4565 2834 150 69 26 chr10 62141747 62142031 -83447257 - MER41D LTR ERV1 0 557 287 2137 124 0 3 chr10 62142031 62142329 -83446959 + AluSx SINE Alu 1 297 -15 2834 150 69 26 chr10 62142329 62142578 -83446710 - MER41D LTR ERV1 -270 287 1 619 216 180 12 chr10 62142672 62142839 -83446449 + MER20 DNA MER1_type 25 219 0 2977 239 46 11 chr10 62142971 62143213 -83446075 + L1M4 LINE L1 2783 3015 -3131 1919 177 26 0 chr10 62143213 62143552 -83445736 - MER7A DNA MER2_type 0 346 1 2977 239 46 11 chr10 62143552 62144199 -83445089 + L1M4 LINE L1 3015 3703 -2443 209 240 240 0 chr10 62145246 62145342 -83443946 + MIR SINE MIR 112 230 -32 * 222 255 51 51 chr10 62145321 62145419 -83443869 + MIR SINE MIR 74 171 -91 24 0 0 0 chr10 62145633 62145657 -83443631 + AT_rich Low_complexity Low_complexity 1 24 0 1927 122 0 4 chr10 62146488 62146759 -83442529 + AluSx SINE Alu 1 270 -42 1274 225 138 44 chr10 62148900 62149000 -83440288 - MLT1D LTR MaLR -2 503 414 1642 163 29 0 chr10 62149000 62149276 -83440012 + AluJb SINE Alu 13 296 -16 1274 225 138 44 chr10 62149276 62149633 -83439655 - MLT1D LTR MaLR -91 414 3 192 125 25 25 chr10 62150276 62150316 -83438972 + MER5B DNA MER1_type 8 47 -131 1854 140 0 17 chr10 62150329 62150621 -83438667 - AluJo SINE Alu -22 290 4 469 191 110 0 chr10 62150749 62150885 -83438403 - Charlie2 DNA MER1_type -68 2794 2644 835 219 34 13 chr10 62150914 62151152 -83438136 - Charlie2 DNA MER1_type -314 2548 2306 1414 237 43 24 chr10 62151167 62151585 -83437703 + L1ME1 LINE L1 5735 6160 -6 1075 299 61 35 chr10 62151716 62152207 -83437081 + L2 LINE L2 2810 3313 0 406 265 20 0 chr10 62153476 62153574 -83435714 + MIR SINE MIR 147 246 -16 1540 160 0 19 chr10 62153892 62154154 -83435134 + AluJo SINE Alu 12 268 -44 32 26 0 0 chr10 62154165 62154204 -83435084 + AT_rich Low_complexity Low_complexity 1 39 0 533 264 6 63 chr10 62154807 62154981 -83434307 + MER5A DNA MER1_type 26 189 0 200 59 29 0 chr10 62155182 62155216 -83434072 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 407 223 75 141 chr10 62155240 62155312 -83433976 - L1MC4a LINE L1 -1961 5847 5772 2679 32 0 3 chr10 62155312 62155620 -83433668 - AluYa5 SINE Alu -4 307 1 407 223 75 141 chr10 62155620 62155713 -83433575 - L1MC4a LINE L1 -2036 5772 5674 6909 64 3 0 chr10 62155713 62156848 -83432440 - L1PA8 LINE L1 -1 6171 5036 407 223 75 141 chr10 62156848 62156986 -83432302 - L1MC4a LINE L1 -2134 5674 5563 228 263 12 12 chr10 62156998 62157078 -83432210 - L1ME LINE L1 -296 5825 5746 2338 74 3 3 chr10 62157941 62158238 -83431050 + AluSp SINE Alu 1 297 -16 355 240 80 56 chr10 62158548 62158673 -83430615 - L2 LINE L2 -286 3027 2900 348 357 64 26 chr10 62159684 62159950 -83429338 - LTR16B LTR ERVL -188 276 1 760 333 53 64 chr10 62160072 62160951 -83428337 - ERVL LTR ERVL -423 5341 4472 922 252 30 64 chr10 62161088 62161185 -83428103 + L1M4 LINE L1 4824 4923 -1223 1194 174 152 30 chr10 62161185 62161440 -83427848 + AluJo SINE Alu 1 290 -12 225 65 0 0 chr10 62161440 62161471 -83427817 + (CATA)n Simple_repeat Simple_repeat 2 32 0 2316 92 13 7 chr10 62161487 62161790 -83427498 + AluSx SINE Alu 1 305 -7 922 252 30 64 chr10 62161790 62162242 -83427046 + L1M4 LINE L1 4930 5363 -783 833 97 0 8 chr10 62162290 62162414 -83426874 - L1PA5 LINE L1 -1 6153 6031 37646 72 15 2 chr10 62162415 62168485 -83420803 - L1PA5 LINE L1 -2 6152 3 584 250 25 20 chr10 62168601 62168797 -83420491 - L1MC4a LINE L1 -1826 5982 5786 * 2205 265 31 17 chr10 62168795 62169500 -83419788 - L1MC4a LINE L1 -1834 5974 5260 484 227 0 0 chr10 62169618 62169715 -83419573 + FLAM_C SINE Alu 38 134 -9 659 171 0 14 chr10 62169727 62169867 -83419421 + GA-rich Low_complexity Low_complexity 4 141 0 949 216 6 0 chr10 62169869 62170031 -83419257 + FRAM SINE Alu 1 155 -21 2669 88 6 0 chr10 62170060 62170413 -83418875 - THE1A LTR MaLR 0 355 1 11377 91 25 0 chr10 62170413 62171954 -83417334 - THE1A-int LTR MaLR 0 1580 1 2779 77 3 0 chr10 62171954 62172307 -83416981 - THE1A LTR MaLR 0 355 2 341 277 31 15 chr10 62172354 62172549 -83416739 - L1MC4a LINE L1 -1062 5084 4887 1693 143 14 3 chr10 62172636 62172929 -83416359 - L1M2 LINE L1 -610 5681 5386 6960 54 26 0 chr10 62172932 62173908 -83415380 - L1PA5 LINE L1 -2 6152 5164 353 287 40 63 chr10 62173909 62174083 -83415205 - L1MC4a LINE L1 -1332 4814 4645 4545 165 31 7 chr10 62174084 62175232 -83414056 - L1PB4 LINE L1 0 6156 4974 323 298 16 28 chr10 62175241 62175493 -83413795 - L1MC4a LINE L1 -1500 4646 4398 1677 190 14 0 chr10 62175503 62175792 -83413496 - AluJo SINE Alu -19 293 1 443 272 22 84 chr10 62175929 62176252 -83413036 - L1ME4a LINE L1 -296 5825 5523 361 179 26 0 chr10 62176368 62176446 -83412842 - MER116 DNA Mariner 0 80 1 406 300 32 64 chr10 62176838 62176980 -83412308 + MIR SINE MIR 49 183 -79 2309 93 0 3 chr10 62176980 62177280 -83412008 + AluSg SINE Alu 1 299 -11 406 300 32 64 chr10 62177280 62177357 -83411931 + MIR SINE MIR 183 261 -1 22 0 0 0 chr10 62177752 62177774 -83411514 + AT_rich Low_complexity Low_complexity 1 22 0 345 257 18 9 chr10 62177818 62177927 -83411361 - MER117 DNA MER1_type -84 113 4 191 262 33 66 chr10 62178160 62178221 -83411067 - L2 LINE L2 -9 3263 3205 1775 163 9 6 chr10 62178240 62178583 -83410705 - L1MB3 LINE L1 -2 6181 5838 1493 231 88 36 chr10 62178599 62179030 -83410258 - L1ME3A LINE L1 0 6170 5706 1763 160 0 41 chr10 62179030 62179174 -83410114 + AluJo SINE Alu 1 149 -161 2354 92 0 0 chr10 62179174 62179469 -83409819 + AluSc SINE Alu 1 295 -14 1763 160 0 41 chr10 62179469 62179646 -83409642 + AluJo SINE Alu 149 310 0 1493 231 88 36 chr10 62179646 62179713 -83409575 - L1ME3A LINE L1 -464 5706 5644 247 279 89 0 chr10 62179741 62179820 -83409468 - L1ME3A LINE L1 -495 5675 5590 429 336 7 35 chr10 62182741 62182884 -83406404 - L2 LINE L2 0 3272 3134 1737 178 58 83 chr10 62184470 62184988 -83404300 - MLT1D LTR MaLR 0 505 1 2915 183 40 57 chr10 62185224 62186210 -83403078 - L1ME1 LINE L1 -141 6025 5067 231 316 13 0 chr10 62186322 62186401 -83402887 - L1MC4a LINE L1 -460 7348 7269 1012 258 40 52 chr10 62186424 62187046 -83402242 - L1MC4 LINE L1 -752 7209 6652 1498 279 72 44 chr10 62187162 62188401 -83400887 - L1ME3A LINE L1 -1074 5072 3800 2130 105 10 3 chr10 62188420 62188715 -83400573 + AluSx SINE Alu 1 297 -15 291 261 0 0 chr10 62188751 62188816 -83400472 - HAL1 LINE L1 -2432 75 11 377 316 54 26 chr10 62189294 62189494 -83399794 - MIR SINE MIR -50 212 10 1117 254 28 68 chr10 62189673 62190174 -83399114 - L1MC4a LINE L1 -958 6850 6370 22 0 0 0 chr10 62190204 62190226 -83399062 + AT_rich Low_complexity Low_complexity 1 22 0 230 213 0 27 chr10 62190239 62190314 -83398974 + (TATATG)n Simple_repeat Simple_repeat 3 75 0 408 309 85 0 chr10 62190357 62190522 -83398766 - L1MC4a LINE L1 -1768 6040 5862 460 283 48 36 chr10 62190525 62190861 -83398427 - L1MC4a LINE L1 -1005 5141 4802 4024 115 61 42 chr10 62190913 62191667 -83397621 - L1PA15 LINE L1 0 6165 5398 1117 150 116 21 chr10 62191667 62191900 -83397388 + THE1B LTR MaLR 1 255 -109 4315 102 35 153 chr10 62191900 62192832 -83396456 - LTR12 LTR ERV1 0 826 5 2202 171 55 26 chr10 62192862 62193442 -83395846 - pTR5 LTR ERV1 -1099 1339 743 684 136 0 0 chr10 62193442 62193545 -83395743 + THE1B LTR MaLR 252 354 -10 401 98 0 0 chr10 62193547 62193608 -83395680 - L1PA15 LINE L1 -754 5402 5342 1912 228 86 62 chr10 62193612 62194460 -83394828 - L1ME LINE L1 -5193 877 10 2072 152 0 9 chr10 62194988 62195303 -83393985 + AluJb SINE Alu 1 312 0 365 319 122 26 chr10 62195432 62195777 -83393511 - L1ME4a LINE L1 -67 6054 5677 458 260 86 62 chr10 62196620 62196850 -83392438 - MIR SINE MIR -2 260 24 1671 132 0 81 chr10 62196866 62197189 -83392099 - AluSx SINE Alu 0 310 12 220 353 57 49 chr10 62197284 62197406 -83391882 - MIR3 SINE MIR -71 137 15 406 351 40 7 chr10 62197418 62197569 -83391719 - MIR3 SINE MIR -37 171 16 446 250 94 19 chr10 62198375 62198535 -83390753 + Charlie8 DNA MER1_type 85 256 -2161 444 310 95 25 chr10 62198715 62198915 -83390373 - MIR SINE MIR -14 248 35 42 0 0 0 chr10 62200088 62200130 -83389158 + AT_rich Low_complexity Low_complexity 1 42 0 427 143 24 12 chr10 62200174 62200258 -83389030 + LTR40a LTR ERVL 5 89 -430 257 0 30 0 chr10 62200277 62200310 -83388978 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 5146 48 2 2 chr10 62200310 62200936 -83388352 - L1PA5 LINE L1 -16 6138 5513 387 330 28 34 chr10 62200936 62201115 -83388173 - MER5A DNA MER1_type -11 178 1 450 315 41 110 chr10 62201237 62201602 -83387686 + L2 LINE L2 2932 3271 -1 516 285 30 18 chr10 62201772 62201937 -83387351 - MIR3 SINE MIR -32 176 10 1819 176 21 69 chr10 62203727 62204160 -83385128 + MLT2D LTR ERVL 3 414 0 397 238 291 13 chr10 62204238 62204389 -83384899 - MIR SINE MIR -13 249 57 843 269 6 11 chr10 62204838 62205020 -83384268 - MER63A DNA MER1_type -3 207 27 299 276 105 0 chr10 62205335 62205440 -83383848 + L2 LINE L2 3193 3308 -5 268 250 8 68 chr10 62205468 62205600 -83383688 + L1ME4a LINE L1 5984 6107 -14 257 313 0 0 chr10 62205912 62206008 -83383280 - L1MEd LINE L1 -3533 2596 2501 391 296 162 45 chr10 62206024 62206561 -83382727 - L1MEd LINE L1 -5074 1045 446 2903 88 6 90 chr10 62206659 62206830 -83382458 - L1MA1 LINE L1 -6 6296 6112 2261 111 3 0 chr10 62206830 62207128 -83382160 - AluSg SINE Alu -9 301 3 2903 88 6 90 chr10 62207128 62207208 -83382080 - L1MA1 LINE L1 -190 6112 6027 2265 108 0 0 chr10 62207208 62207504 -83381784 - AluY SINE Alu -15 296 1 2903 88 6 90 chr10 62207504 62207771 -83381517 - L1MA1 LINE L1 -275 6027 5821 3600 75 14 14 chr10 62207772 62208268 -83381020 - L1MA1 LINE L1 -376 5926 5431 29 28 0 0 chr10 62208570 62208606 -83380682 + AT_rich Low_complexity Low_complexity 1 36 0 3743 123 2 2 chr10 62208607 62209182 -83380106 - L1PB2 LINE L1 -4 6147 5573 7005 180 6 3 chr10 62209182 62210405 -83378883 - L1PBa LINE L1 -5305 1558 333 1127 132 0 0 chr10 62210408 62210567 -83378721 + THE1B LTR MaLR 1 159 -205 401 285 26 7 chr10 62210589 62210740 -83378548 + MER103 DNA DNA 13 166 0 368 307 94 20 chr10 62210934 62211178 -83378110 + MARNA DNA Mariner 264 525 -61 345 270 36 7 chr10 62211209 62211346 -83377942 + L1ME4a LINE L1 5978 6118 -3 289 279 116 39 chr10 62211356 62211485 -83377803 - MIR3 SINE MIR -31 177 39 438 277 39 15 chr10 62212329 62212459 -83376829 - L2 LINE L2 -15 3298 3166 253 301 14 0 chr10 62212546 62212619 -83376669 + MIR3 SINE MIR 82 155 -53 187 265 0 0 chr10 62212627 62212676 -83376612 - L2 LINE L2 0 3272 3224 452 208 0 9 chr10 62212894 62213000 -83376288 + CT-rich Low_complexity Low_complexity 2 106 0 1069 76 0 0 chr10 62213626 62213757 -83375531 - AluSc SINE Alu -178 131 1 267 31 0 0 chr10 62214025 62214057 -83375231 + (TG)n Simple_repeat Simple_repeat 1 32 0 250 268 24 0 chr10 62214771 62214853 -83374435 + L1MEd LINE L1 3 86 -6033 3495 236 92 13 chr10 62214858 62216103 -83373185 - L1MEc LINE L1 -2641 3574 2232 321 92 0 108 chr10 62216122 62216187 -83373101 - MER20 DNA MER1_type -125 94 37 228 164 27 27 chr10 62216187 62216260 -83373028 + CT-rich Low_complexity Low_complexity 2 74 0 245 213 64 0 chr10 62216289 62216336 -83372952 - MER20 DNA MER1_type -169 50 1 1001 271 109 62 chr10 62216336 62216543 -83372745 - L1MEc LINE L1 -4332 2064 1868 1462 167 47 25 chr10 62216543 62216818 -83372470 - AluJb SINE Alu -26 286 6 1001 271 109 62 chr10 62216818 62217106 -83372182 - L1MEc LINE L1 -4528 1868 1595 1160 277 43 45 chr10 62217106 62217571 -83371717 - LTR16B LTR ERVL 0 464 1 230 27 81 0 chr10 62217574 62217611 -83371677 + T-rich Low_complexity Low_complexity 3 42 0 1001 271 109 62 chr10 62217611 62218098 -83371190 - L1MEc LINE L1 -4802 1594 1030 21 36 0 0 chr10 62218241 62218269 -83371019 + AT_rich Low_complexity Low_complexity 1 28 0 1597 164 86 0 chr10 62218565 62218845 -83370443 - AluSx SINE Alu -7 305 2 293 331 126 0 chr10 62218998 62219125 -83370163 - L1MC/D LINE L1 -2079 5729 5587 2690 101 34 10 chr10 62219126 62219534 -83369754 + MLT2A1 LTR ERVL 1 418 -26 494 73 73 118 chr10 62219541 62219584 -83369704 + MLT2A1 LTR ERVL 340 383 -61 300 111 0 0 chr10 62219584 62219629 -83369659 + (TA)n Simple_repeat Simple_repeat 1 45 0 494 73 73 118 chr10 62219629 62219695 -83369593 + MLT2A1 LTR ERVL 383 444 0 402 303 33 8 chr10 62219696 62219818 -83369470 - L1MC/D LINE L1 -2219 5589 5465 389 307 19 56 chr10 62220879 62221094 -83368194 + MIR SINE MIR 7 213 -49 1074 188 72 0 chr10 62221207 62221415 -83367873 + MER58A DNA MER1_type 1 223 -1 382 219 79 33 chr10 62222183 62222350 -83366938 + MIR SINE MIR 20 186 -62 29 28 0 0 chr10 62222372 62222408 -83366880 + AT_rich Low_complexity Low_complexity 1 36 0 361 208 200 8 chr10 62222761 62222881 -83366407 + LTR67 LTR ERVL 415 557 0 583 340 38 8 chr10 62222900 62223138 -83366150 - MIR SINE MIR -12 250 6 699 310 91 3 chr10 62223176 62223515 -83365773 - L1ME4a LINE L1 -224 5897 5529 1212 239 13 23 chr10 62223676 62223981 -83365307 + AluJo SINE Alu 1 302 0 3275 98 4 10 chr10 62223995 62224485 -83364803 + L1MA4A LINE L1 5811 6297 -6 2149 110 3 3 chr10 62224580 62224872 -83364416 + AluSp SINE Alu 1 292 -21 354 156 0 0 chr10 62224930 62224994 -83364294 + (ATG)n Simple_repeat Simple_repeat 1 64 0 270 0 0 0 chr10 62225732 62225762 -83363526 + (CA)n Simple_repeat Simple_repeat 1 30 0 755 198 24 18 chr10 62225764 62225931 -83363357 + MER104 DNA Tc2 3 170 -10 221 272 62 25 chr10 62226062 62226143 -83363145 - MIR3 SINE MIR -31 177 94 767 211 11 5 chr10 62226440 62226812 -83362476 + CT-rich Low_complexity Low_complexity 1 374 0 2151 167 65 0 chr10 62226967 62227339 -83361949 + MSTD LTR MaLR 1 396 0 380 261 23 8 chr10 62228436 62228566 -83360722 - L1ME4a LINE L1 -1 6120 5989 2257 119 0 0 chr10 62229679 62229990 -83359298 + AluY SINE Alu 1 311 0 279 261 17 35 chr10 62230135 62230250 -83359038 + MER104 DNA Tc2 5 117 -63 531 295 24 0 chr10 62231205 62231371 -83357917 + MIR SINE MIR 83 252 -10 22 0 0 0 chr10 62232080 62232102 -83357186 + AT_rich Low_complexity Low_complexity 1 22 0 1322 186 71 8 chr10 62232346 62232598 -83356690 - AluJb SINE Alu -23 289 22 22 56 0 0 chr10 62232679 62232715 -83356573 + AT_rich Low_complexity Low_complexity 1 36 0 324 265 104 72 chr10 62233462 62233711 -83355577 - L1ME4a LINE L1 -24 6097 5841 1339 271 111 31 chr10 62234016 62234827 -83354461 - L1M1 LINE L1 -3900 3665 2790 4598 187 20 20 chr10 62234839 62236309 -83352979 + L1MB1 LINE L1 4675 6146 -22 667 231 186 24 chr10 62236467 62237024 -83352264 - LTR50 LTR ERVL -9 786 2 681 134 98 0 chr10 62237180 62237292 -83351996 + Tigger1 DNA MER2_type 1192 1314 -1104 15266 135 19 4 chr10 62237743 62239000 -83350288 + Tigger1 DNA MER2_type 1 1312 -1106 2069 130 144 5 chr10 62239000 62239376 -83349912 - MSTA LTR MaLR 0 428 1 15266 135 19 4 chr10 62239376 62240499 -83348789 + Tigger1 DNA MER2_type 1312 2417 -1 298 302 144 43 chr10 62240574 62240852 -83348436 - L2 LINE L2 0 3313 3008 2237 116 33 28 chr10 62240929 62241291 -83347997 + THE1B LTR MaLR 1 364 0 191 318 32 0 chr10 62242179 62242242 -83347046 - MER5B DNA MER1_type -68 110 46 1590 180 52 0 chr10 62242261 62242528 -83346760 - AluJo SINE Alu -31 281 1 582 155 0 0 chr10 62242528 62242625 -83346663 + MLT1D LTR MaLR 408 504 -1 740 246 58 5 chr10 62243001 62243192 -83346096 - MER20 DNA MER1_type 0 219 19 3142 153 23 23 chr10 62243279 62243836 -83345452 + MER41D LTR ERV1 1 557 0 214 340 62 21 chr10 62244596 62244740 -83344548 + L2 LINE L2 2420 2569 -745 2326 208 49 3 chr10 62244944 62245515 -83343773 + L1M4 LINE L1 4565 5161 -985 186 43 0 0 chr10 62245518 62245541 -83343747 + (TTTTC)n Simple_repeat Simple_repeat 3 25 0 1150 140 0 0 chr10 62245544 62245701 -83343587 - AluSg/x SINE Alu -30 280 124 500 269 36 36 chr10 62245739 62245958 -83343330 - HAL1b LINE L1 -860 488 270 835 165 0 0 chr10 62245986 62246119 -83343169 - FRAM SINE Alu -10 166 34 546 86 0 12 chr10 62247148 62247229 -83342059 - MADE1 DNA Mariner 0 80 1 505 243 89 97 chr10 62247404 62247578 -83341710 - MIR SINE MIR 0 262 89 1896 251 41 42 chr10 62247578 62248168 -83341120 + MLT1E LTR MaLR 5 593 0 505 243 89 97 chr10 62248168 62248252 -83341036 - MIR SINE MIR -173 89 6 486 291 35 52 chr10 62248423 62248595 -83340693 - MIR3 SINE MIR -8 200 32 460 237 98 29 chr10 62248842 62249015 -83340273 + MER117 DNA MER1_type 6 190 -7 198 0 0 0 chr10 62249337 62249359 -83339929 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 381 22 0 0 chr10 62250066 62250112 -83339176 + (TG)n Simple_repeat Simple_repeat 1 46 0 279 114 0 0 chr10 62250114 62250158 -83339130 + (GA)n Simple_repeat Simple_repeat 2 45 0 911 75 0 15 chr10 62250408 62250452 -83338836 - L1PA4 LINE L1 -172 5983 5940 231 270 30 20 chr10 62250452 62250541 -83338747 - L1MA6 LINE L1 -359 5941 5849 1271 20 7 0 chr10 62250541 62250693 -83338595 + L1PA4 LINE L1 6002 6154 -1 481 287 121 11 chr10 62250734 62250908 -83338380 + MIR SINE MIR 70 262 0 207 250 0 21 chr10 62251303 62251351 -83337937 + MIR3 SINE MIR 111 157 -51 216 323 31 0 chr10 62251396 62251461 -83337827 + MIR SINE MIR 82 148 -60 223 246 116 14 chr10 62251630 62251699 -83337589 - L2 LINE L2 -37 3276 3201 204 135 0 0 chr10 62251716 62251753 -83337535 + (ATG)n Simple_repeat Simple_repeat 3 39 0 22 80 0 0 chr10 62252673 62252723 -83336565 + AT_rich Low_complexity Low_complexity 1 50 0 1576 253 125 51 chr10 62252780 62253666 -83335622 - HAL1 LINE L1 -42 2465 1514 1552 332 118 44 chr10 62253684 62255374 -83333914 + L2 LINE L2 1137 2952 -362 736 235 25 56 chr10 62255385 62255581 -83333707 + MIR SINE MIR 2 191 -71 496 319 85 21 chr10 62255584 62255913 -83333375 + L2 LINE L2 2954 3303 -10 306 298 21 21 chr10 62256151 62256245 -83333043 + MIR SINE MIR 45 138 -70 421 269 110 100 chr10 62257356 62257899 -83331389 - L1M2 LINE L1 -5532 1317 531 1339 121 18 176 chr10 62259897 62260284 -83329004 - MER7A DNA MER2_type 0 346 23 507 275 113 31 chr10 62260287 62260509 -83328779 + MIR SINE MIR 23 262 0 242 328 0 0 chr10 62260543 62260607 -83328681 + L2 LINE L2 3245 3308 -5 23 0 0 0 chr10 62261723 62261746 -83327542 + AT_rich Low_complexity Low_complexity 1 23 0 394 267 127 41 chr10 62262278 62262499 -83326789 + MIR SINE MIR 8 247 -15 459 274 44 0 chr10 62262976 62263111 -83326177 + MIR SINE MIR 116 256 -6 433 247 45 34 chr10 62263639 62263817 -83325471 - MLT1J LTR MaLR -19 492 313 24 0 0 0 chr10 62264252 62264276 -83325012 + AT_rich Low_complexity Low_complexity 1 24 0 260 122 24 0 chr10 62264277 62264318 -83324970 - MER57A LTR ERV1 -67 336 295 362 259 43 7 chr10 62265367 62265506 -83323782 - L1ME4a LINE L1 -10 6111 5968 288 316 20 20 chr10 62265543 62265641 -83323647 - L2 LINE L2 -24 3289 3192 329 283 55 14 chr10 62265657 62265802 -83323486 - L1ME4a LINE L1 -232 5889 5739 472 230 218 6 chr10 62265836 62266010 -83323278 + MIR SINE MIR 40 250 -12 243 0 0 0 chr10 62266413 62266440 -83322848 + (T)n Simple_repeat Simple_repeat 1 27 0 320 336 16 16 chr10 62266454 62266579 -83322709 - MER5A DNA MER1_type -64 125 1 21458 35 8 1 chr10 62266936 62270351 -83318937 + L1PA4 LINE L1 2736 6153 -2 200 343 15 44 chr10 62270707 62270844 -83318444 - MIR SINE MIR -6 256 124 6846 46 12 2 chr10 62271022 62272372 -83316916 - L1PA5 LINE L1 0 6154 4838 362 80 0 0 chr10 62272372 62272422 -83316866 + L1PA5 LINE L1 4797 4846 -1300 234 283 358 8 chr10 62273295 62273415 -83315873 + MIR3 SINE MIR 31 192 -16 581 285 70 80 chr10 62275472 62275872 -83313416 + L1MB2 LINE L1 421 816 -5487 2576 240 56 34 chr10 62276023 62276896 -83312392 + L1MB2 LINE L1 799 1651 -4731 6849 135 65 39 chr10 62276896 62278164 -83311124 + HSMAR2 DNA Mariner 2 1301 -1 2576 240 56 34 chr10 62278164 62278787 -83310501 + L1MB2 LINE L1 1651 2598 -3784 519 280 28 3 chr10 62278825 62278991 -83310297 + L1PB3 LINE L1 3 189 -6673 12680 197 64 13 chr10 62279015 62284177 -83305111 + L1PB3 LINE L1 1403 6870 0 10978 205 51 23 chr10 62284190 62286501 -83302787 + L1MB2 LINE L1 2631 4876 -1531 1978 164 0 3 chr10 62286501 62286812 -83302476 + AluJb SINE Alu 1 310 -2 10978 205 51 23 chr10 62286812 62288155 -83301133 + L1MB2 LINE L1 4876 6377 -30 1727 171 7 7 chr10 62288155 62288442 -83300846 - AluJo SINE Alu -25 287 1 10978 205 51 23 chr10 62288442 62288474 -83300814 + L1MB2 LINE L1 6377 6407 0 1592 179 36 94 chr10 62289383 62289797 -83299491 + MLT1B LTR MaLR 1 390 0 649 295 26 26 chr10 62290906 62291140 -83298148 - Charlie8 DNA MER1_type -2141 276 43 27 49 0 0 chr10 62291338 62291379 -83297909 + AT_rich Low_complexity Low_complexity 1 41 0 9921 174 76 52 chr10 62291641 62293515 -83295773 - L1MC3 LINE L1 -7 7778 5951 1637 167 53 0 chr10 62293515 62293779 -83295509 - AluJb SINE Alu -34 278 1 9921 174 76 52 chr10 62293779 62294309 -83294979 - L1MC3 LINE L1 -1834 5951 5435 2203 121 0 10 chr10 62294309 62294622 -83294666 - AluSx SINE Alu -2 310 1 9921 174 76 52 chr10 62294622 62294663 -83294625 - L1MC3 LINE L1 -2350 5435 5396 1601 178 7 27 chr10 62294663 62294955 -83294333 - AluJo SINE Alu -26 286 1 9921 174 76 52 chr10 62294955 62295456 -83293832 - L1MC3 LINE L1 -2389 5396 4769 409 239 39 58 chr10 62295696 62295851 -83293437 + L2 LINE L2 3142 3293 -20 2027 136 20 44 chr10 62295989 62296395 -83292893 - L1MA8 LINE L1 -5 6286 5891 652 122 0 0 chr10 62296411 62296509 -83292779 + MLT1D LTR MaLR 408 505 0 2136 76 0 0 chr10 62296947 62297247 -83292041 - AluY SINE Alu 0 321 22 319 323 32 0 chr10 62297312 62297405 -83291883 + MIR SINE MIR 31 126 -82 27 49 0 0 chr10 62297564 62297605 -83291683 + AT_rich Low_complexity Low_complexity 1 41 0 1889 206 61 35 chr10 62297763 62298254 -83291034 + MLT1D LTR MaLR 2 505 0 21 71 0 0 chr10 62298658 62298700 -83290588 + AT_rich Low_complexity Low_complexity 1 42 0 201 339 31 54 chr10 62298851 62298981 -83290307 - MIR SINE MIR -63 145 19 27 29 0 0 chr10 62299511 62299545 -83289743 + AT_rich Low_complexity Low_complexity 1 34 0 252 0 0 0 chr10 62299940 62299968 -83289320 + (T)n Simple_repeat Simple_repeat 1 28 0 637 203 60 0 chr10 62301549 62301682 -83287606 + MLT1D LTR MaLR 1 141 -364 3822 263 105 16 chr10 62301683 62303245 -83286043 - L1MEc LINE L1 -4652 1744 44 1725 188 22 25 chr10 62303292 62303653 -83285635 - MLT1A1 LTR MaLR -2 363 4 6518 198 51 22 chr10 62303947 62307605 -83281683 - L1 LINE L1 -1716 5492 1728 1480 264 92 59 chr10 62307581 62308289 -83280999 - L1 LINE L1 -6476 733 3 * 29 60 0 0 chr10 62308704 62308754 -83280534 + AT_rich Low_complexity Low_complexity 1 50 0 213 338 0 12 chr10 62309069 62309149 -83280139 - MIR SINE MIR -118 144 66 226 284 137 21 chr10 62309877 62309972 -83279316 - L2 LINE L2 -17 3255 3150 2131 86 98 3 chr10 62310457 62310783 -83278505 - L1PB1 LINE L1 -4 6147 5791 295 296 0 12 chr10 62310820 62310992 -83278296 + (TA)n Simple_repeat Simple_repeat 1 170 0 2698 106 5 5 chr10 62311000 62311417 -83277871 - L1PB1 LINE L1 -360 5791 5375 216 237 15 74 chr10 62312040 62312175 -83277113 + (TATATG)n Simple_repeat Simple_repeat 6 132 0 27 0 0 0 chr10 62312201 62312228 -83277060 + AT_rich Low_complexity Low_complexity 1 27 0 187 330 96 0 chr10 62312514 62312629 -83276659 - L2 LINE L2 -319 2953 2828 231 287 188 50 chr10 62312664 62312866 -83276422 + MIR SINE MIR 30 259 -3 5127 77 0 0 chr10 62314040 62314699 -83274589 - L1PA7 LINE L1 -15 6139 5481 22 0 0 0 chr10 62315935 62315957 -83273331 + AT_rich Low_complexity Low_complexity 1 22 0 6227 100 60 0 chr10 62315957 62317053 -83272235 - L1PA11 LINE L1 -2 6172 5052 217 169 92 0 chr10 62317530 62317595 -83271693 + (TTATG)n Simple_repeat Simple_repeat 5 75 0 1597 234 39 25 chr10 62319200 62319647 -83269641 - Charlie1b DNA MER1_type -2239 522 66 2076 61 0 4 chr10 62319647 62319911 -83269377 - L1PA8 LINE L1 0 6172 5910 1597 234 39 25 chr10 62319911 62319977 -83269311 - Charlie1b DNA MER1_type -2695 66 2 196 309 62 31 chr10 62319980 62320077 -83269211 - MIR SINE MIR -44 218 119 21 0 0 0 chr10 62320135 62320156 -83269132 + AT_rich Low_complexity Low_complexity 1 21 0 551 261 0 8 chr10 62320226 62320356 -83268932 - FLAM_A SINE Alu -4 129 1 557 238 98 60 chr10 62320905 62321140 -83268148 - MER5C DNA MER1_type -80 244 1 396 279 176 44 chr10 62321791 62321995 -83267293 - MIR SINE MIR -12 250 20 21 36 0 0 chr10 62323969 62323997 -83265291 + AT_rich Low_complexity Low_complexity 1 28 0 542 164 33 93 chr10 62324612 62324661 -83264627 - L1MB1 LINE L1 0 6168 6118 2123 122 7 0 chr10 62324661 62324957 -83264331 - AluSx SINE Alu -14 298 1 542 164 33 93 chr10 62324957 62324978 -83264310 - L1MB1 LINE L1 -50 6118 6097 1560 130 0 13 chr10 62324978 62325217 -83264071 + MER46A DNA MER2_type 1 236 0 542 164 33 93 chr10 62325217 62325328 -83263960 - L1MB1 LINE L1 -71 6097 5997 21 0 0 0 chr10 62325940 62325961 -83263327 + AT_rich Low_complexity Low_complexity 1 21 0 300 312 161 35 chr10 62326418 62326815 -83262473 - L1MC4a LINE L1 -1635 6173 5727 400 316 86 0 chr10 62326822 62327031 -83262257 - L1MC4a LINE L1 -2194 5614 5388 1814 192 106 35 chr10 62327181 62327645 -83261643 - MLT1D LTR MaLR -8 497 1 333 338 48 43 chr10 62327648 62327855 -83261433 + L2 LINE L2 2331 2538 -776 3953 91 31 32 chr10 62327866 62328218 -83261070 - L1PB1 LINE L1 0 6151 5799 387 0 0 0 chr10 62328218 62328261 -83261027 + (TG)n Simple_repeat Simple_repeat 2 44 0 3953 91 31 32 chr10 62328261 62328526 -83260762 - L1PB1 LINE L1 -352 5799 5535 442 178 0 0 chr10 62328528 62328601 -83260687 - AluJ/FLAM SINE Alu -239 73 1 405 0 0 0 chr10 62328689 62328734 -83260554 + (CA)n Simple_repeat Simple_repeat 2 46 0 484 250 0 10 chr10 62329296 62329400 -83259888 + MER81 DNA DNA 2 104 -10 216 97 0 0 chr10 62330828 62330859 -83258429 + (TCCA)n Simple_repeat Simple_repeat 1 31 0 263 274 36 36 chr10 62331024 62331108 -83258180 - L2 LINE L2 -15 3257 3174 894 89 0 107 chr10 62331108 62331276 -83258012 + AluSg/x SINE Alu 155 304 -6 272 270 34 0 chr10 62331298 62331429 -83257859 + (CATA)n Simple_repeat Simple_repeat 1 135 0 227 223 223 11 chr10 62333541 62333635 -83255653 + MER81 DNA DNA 1 114 0 592 256 37 37 chr10 62333745 62333960 -83255328 + LTR16C LTR ERVL 277 491 0 346 271 52 10 chr10 62333964 62334060 -83255228 - MIR SINE MIR -99 163 64 1771 169 10 26 chr10 62334095 62334408 -83254880 - AluJo SINE Alu -4 308 1 24 0 0 0 chr10 62334413 62334437 -83254851 + AT_rich Low_complexity Low_complexity 1 24 0 932 205 0 0 chr10 62334437 62334603 -83254685 - FAM SINE Alu -9 166 1 1523 151 136 15 chr10 62335962 62336286 -83253002 - MLT1A1 LTR MaLR 0 365 3 2213 84 3 13 chr10 62337064 62337362 -83251926 + AluY SINE Alu 1 295 -16 1402 80 0 0 chr10 62337362 62337537 -83251751 + AluSc SINE Alu 133 307 -2 21270 114 71 11 chr10 62337548 62341687 -83247601 + L1PA7 LINE L1 490 4955 -1506 5627 53 155 86 chr10 62341694 62342792 -83246496 - MER11A LTR ERVK 0 1266 1 6720 76 8 0 chr10 62342794 62344294 -83244994 + L1PA7 LINE L1 4959 6467 -2 234 0 0 0 chr10 62344563 62344589 -83244699 + (TG)n Simple_repeat Simple_repeat 2 27 0 2152 150 57 26 chr10 62345232 62345651 -83243637 + Tigger2a DNA MER2_type 2 433 -1 279 0 0 0 chr10 62345774 62345805 -83243483 + (TA)n Simple_repeat Simple_repeat 1 31 0 24 0 0 0 chr10 62345822 62345846 -83243442 + AT_rich Low_complexity Low_complexity 1 24 0 269 260 55 39 chr10 62346200 62346327 -83242961 - L1ME LINE L1 -457 5664 5536 311 235 37 88 chr10 62347981 62348117 -83241171 - MER5A DNA MER1_type 0 189 61 229 311 53 45 chr10 62348022 62348154 -83241134 + MER5A DNA MER1_type 44 176 -13 * 2022 72 34 4 chr10 62349021 62349284 -83240004 + AluY SINE Alu 1 271 -40 1912 165 28 8 chr10 62349389 62349747 -83239541 - MLT1A1 LTR MaLR 0 365 1 1285 264 110 57 chr10 62349841 62350145 -83239143 - HAL1 LINE L1 -16 2491 2204 1726 165 62 3 chr10 62350145 62350466 -83238822 + MER2 DNA MER2_type 4 343 -1 1285 264 110 57 chr10 62350466 62351046 -83238242 - HAL1 LINE L1 -303 2204 1523 1301 30 6 6 chr10 62351046 62351210 -83238078 + L1PA3 LINE L1 5992 6155 0 1285 264 110 57 chr10 62351210 62351535 -83237753 - HAL1 LINE L1 -984 1523 1217 2192 85 3 0 chr10 62351668 62351978 -83237310 + AluSp SINE Alu 1 311 0 209 227 11 48 chr10 62352110 62352302 -83236986 + CT-rich Low_complexity Low_complexity 1 184 0 314 323 11 11 chr10 62353339 62353432 -83235856 - MIR SINE MIR -136 126 34 1260 181 73 3 chr10 62354084 62354387 -83234901 - MER33 DNA MER1_type 0 324 1 304 240 31 23 chr10 62355889 62356018 -83233270 - L1ME4a LINE L1 -58 6063 5934 2101 128 20 0 chr10 62356099 62356272 -83233016 - AluSx SINE Alu -2 310 127 189 0 0 0 chr10 62356272 62356293 -83232995 + (TTA)n Simple_repeat Simple_repeat 2 22 0 2101 128 20 0 chr10 62356293 62356423 -83232865 - AluSx SINE Alu -185 127 1 25 31 0 0 chr10 62358586 62358618 -83230670 + AT_rich Low_complexity Low_complexity 1 32 0 2144 165 11 11 chr10 62359955 62360312 -83228976 + LTR18A LTR ERVL 1 357 0 2356 212 10 24 chr10 62360330 62360835 -83228453 + HERVL18 LTR ERVL 1 498 -5549 1966 223 56 16 chr10 62360829 62361277 -83228011 + HERVL18 LTR ERVL 1149 1614 -4433 * 1052 113 125 2 chr10 62361310 62361556 -83227732 + HERVL18 LTR ERVL 2119 2452 -3595 * 4355 174 11 41 chr10 62361555 62362441 -83226847 + HERVL18 LTR ERVL 2720 3579 -2468 610 149 11 0 chr10 62362443 62362537 -83226751 + HERVL18 LTR ERVL 4394 4488 -1559 314 228 0 0 chr10 62362539 62362596 -83226692 + HERVL18 LTR ERVL 5211 5267 -780 579 176 0 0 chr10 62362596 62362698 -83226590 + HERVL18 LTR ERVL 5946 6047 0 1899 155 2 108 chr10 62362880 62363279 -83226009 + LTR18A LTR ERVL 1 357 0 1734 198 82 59 chr10 62363372 62363862 -83225426 - MLT1D LTR MaLR -4 501 1 2099 82 8 0 chr10 62364112 62364368 -83224920 - AluSc SINE Alu -13 296 39 21 36 0 0 chr10 62365917 62365945 -83223343 + AT_rich Low_complexity Low_complexity 1 28 0 1714 170 0 74 chr10 62366164 62366257 -83223031 + AluJb SINE Alu 1 99 -213 1816 165 29 0 chr10 62366257 62366536 -83222752 + AluSx SINE Alu 1 287 -25 603 0 0 0 chr10 62366537 62366604 -83222684 + (AATAG)n Simple_repeat Simple_repeat 2 68 0 1714 170 0 74 chr10 62366604 62366844 -83222444 + AluJb SINE Alu 98 311 -1 26 0 0 0 chr10 62367862 62367888 -83221400 + AT_rich Low_complexity Low_complexity 1 26 0 286 314 6 0 chr10 62368383 62368506 -83220782 - MLT1J2 LTR MaLR -237 209 85 1522 168 71 7 chr10 62368695 62369005 -83220283 - MLT1C LTR MaLR -137 330 1 2211 127 0 0 chr10 62369217 62369524 -83219764 - AluSx SINE Alu -2 310 4 22 56 0 0 chr10 62369582 62369618 -83219670 + AT_rich Low_complexity Low_complexity 1 36 0 2242 99 10 0 chr10 62371456 62371748 -83217540 + AluSp SINE Alu 1 295 -18 699 240 158 24 chr10 62372422 62372834 -83216454 + L1ME4a LINE L1 5654 6120 -1 461 321 102 5 chr10 62373145 62373332 -83215956 - L3 LINE CR1 -344 1233 1029 970 173 6 17 chr10 62375048 62375227 -83214061 - FRAM SINE Alu 0 176 1 366 23 0 0 chr10 62377476 62377519 -83211769 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 2053 135 71 0 chr10 62377630 62377970 -83211318 + THE1B LTR MaLR 1 364 0 2278 107 13 3 chr10 62378615 62378925 -83210363 - AluSq SINE Alu 0 313 1 603 244 79 30 chr10 62379037 62379201 -83210087 - MER5B DNA MER1_type -6 172 1 2102 159 42 42 chr10 62379278 62379712 -83209576 - Tigger2a DNA MER2_type 0 434 1 256 356 74 20 chr10 62380763 62380912 -83208376 - MIR3 SINE MIR -6 202 46 204 40 0 0 chr10 62381215 62381240 -83208048 + (TCC)n Simple_repeat Simple_repeat 1 25 0 481 299 142 10 chr10 62381322 62381526 -83207762 + MIR SINE MIR 20 250 -12 202 198 136 74 chr10 62383391 62383472 -83205816 + MIR3 SINE MIR 108 193 -15 378 93 67 0 chr10 62383473 62383548 -83205740 + T-rich Low_complexity Low_complexity 1 80 0 1365 82 82 8 chr10 62383583 62383827 -83205461 - L1MA8 LINE L1 -2 6289 6028 2157 85 6 69 chr10 62384031 62384350 -83204938 - AluSx SINE Alu -13 299 1 1479 105 57 0 chr10 62384353 62384562 -83204726 - AluJb SINE Alu -7 305 85 368 291 7 57 chr10 62385241 62385382 -83203906 - L2 LINE L2 -3 3269 3136 427 89 67 78 chr10 62386400 62386490 -83202798 - L1MB2 LINE L1 -7 6164 6076 1729 164 14 11 chr10 62387300 62387637 -83201651 - AluJb SINE Alu 0 338 1 2651 49 7 0 chr10 62389761 62390069 -83199219 + AluY SINE Alu 1 310 -1 377 260 123 48 chr10 62391559 62391786 -83197502 - L1ME4a LINE L1 0 6121 5878 264 59 0 0 chr10 62393218 62393252 -83196036 + (TC)n Simple_repeat Simple_repeat 2 35 0 394 294 228 27 chr10 62394357 62394541 -83194747 - MIR SINE MIR -39 223 3 257 250 128 33 chr10 62394576 62394756 -83194532 + MER112 DNA MER1_type 7 203 -57 197 250 0 0 chr10 62397469 62397509 -83191779 + L2 LINE L2 3217 3256 -16 12393 24 0 0 chr10 62398314 62400538 -83188750 - L1PA2 LINE L1 0 6155 3932 5784 44 0 1 chr10 62400538 62401292 -83187996 + L1PA2 LINE L1 3196 3948 -2198 333 278 7 76 chr10 62402380 62402524 -83186764 - L1MC4a LINE L1 -1926 5882 5749 2021 257 68 40 chr10 62402593 62402831 -83186457 - L1MC4 LINE L1 -593 7449 7219 1982 135 7 3 chr10 62402831 62403120 -83186168 - AluSx SINE Alu -22 290 1 2021 257 68 40 chr10 62403120 62403674 -83185614 - L1MC4 LINE L1 -823 7219 6635 4254 104 68 3 chr10 62403707 62404354 -83184934 + L1PA15 LINE L1 5472 6160 -5 234 146 21 21 chr10 62405436 62405484 -83183804 + MER5B DNA MER1_type 131 178 0 355 215 0 0 chr10 62407567 62407632 -83181656 + L2 LINE L2 3249 3313 0 2232 125 0 0 chr10 62407688 62408000 -83181288 - AluSx SINE Alu 0 312 1 2145 138 21 3 chr10 62408103 62408436 -83180852 + MER1B DNA MER1_type 1 339 0 2044 224 74 12 chr10 62408439 62409123 -83180165 - L1ME1 LINE L1 -246 5920 5192 1717 255 46 43 chr10 62409148 62409865 -83179423 - L1MCc LINE L1 -4887 1536 818 2789 122 9 7 chr10 62410660 62411093 -83178195 - MER57B LTR ERV1 0 434 1 318 247 86 0 chr10 62411271 62411364 -83177924 + MIR SINE MIR 71 171 -91 195 370 89 15 chr10 62412324 62412459 -83176829 - MIR3 SINE MIR -31 177 33 27 29 0 0 chr10 62412630 62412664 -83176624 + AT_rich Low_complexity Low_complexity 1 34 0 618 159 152 0 chr10 62413794 62413926 -83175362 - MER46A DNA MER2_type -84 152 1 23 0 0 0 chr10 62414742 62414765 -83174523 + AT_rich Low_complexity Low_complexity 1 23 0 411 344 66 18 chr10 62415134 62415361 -83173927 - L2 LINE L2 -785 2529 2292 1070 167 41 12 chr10 62415368 62415614 -83173674 + L1ME2 LINE L1 5696 5948 -216 544 275 137 63 chr10 62415792 62416217 -83173071 - MLT1J LTR MaLR 0 511 56 566 313 83 71 chr10 62416263 62416685 -83172603 + L2 LINE L2 1713 2139 -1175 1445 114 4 0 chr10 62416685 62416912 -83172376 - L1MB3 LINE L1 -3 6180 5953 271 354 0 0 chr10 62416964 62417046 -83172242 + L2 LINE L2 3191 3272 0 287 356 0 0 chr10 62417227 62417314 -83171974 + L2 LINE L2 3127 3213 -59 193 214 24 0 chr10 62417957 62417999 -83171289 - L2 LINE L2 -4 3309 3267 2092 122 0 28 chr10 62418228 62418549 -83170739 - AluSx SINE Alu 0 312 1 393 256 69 12 chr10 62418638 62418798 -83170490 + Charlie8 DNA MER1_type 38 206 -2211 1270 190 43 7 chr10 62419983 62420425 -83168863 + L1MA9 LINE L1 5738 6293 -19 28726 120 23 51 chr10 62420461 62426255 -83163033 + L1P3 LINE L1 12 5626 -528 1707 62 0 0 chr10 62426255 62426479 -83162809 - LTR12 LTR ERV1 0 714 491 37456 73 10 8 chr10 62426483 62432610 -83156678 - L1PA5 LINE L1 0 6154 1 888 108 0 0 chr10 62432610 62432739 -83156549 - LTR12 LTR ERV1 -209 505 377 320 233 11 0 chr10 62432740 62432830 -83156458 - LTR30 LTR ERV1 -80 642 552 1408 63 90 137 chr10 62432830 62433129 -83156159 - LTR12 LTR ERV1 -429 285 1 4101 69 2 0 chr10 62433129 62433652 -83155636 + L1PA7 LINE L1 5623 6146 -8 260 257 37 37 chr10 62433906 62434015 -83155273 - MLT1L LTR MaLR -340 275 167 293 275 57 105 chr10 62434849 62435183 -83154105 + MLT1I LTR MaLR 69 386 -23 1024 196 68 32 chr10 62435592 62435873 -83153415 - L1MA10 LINE L1 -1 6333 6043 475 212 59 36 chr10 62436137 62436300 -83152988 + Charlie8 DNA MER1_type 1 189 -2228 231 36 0 0 chr10 62436784 62436812 -83152476 + (GA)n Simple_repeat Simple_repeat 1 28 0 4272 197 44 41 chr10 62436984 62437482 -83151806 - Tigger6a DNA MER2_type -515 1082 587 7459 36 0 0 chr10 62437482 62438616 -83150672 - L1PA4 LINE L1 -3 6152 5018 4272 197 44 41 chr10 62438616 62439196 -83150092 - Tigger6a DNA MER2_type -1010 587 1 231 332 180 3 chr10 62439553 62439720 -83149568 + MIR SINE MIR 17 206 -56 23 0 0 0 chr10 62440826 62440849 -83148439 + AT_rich Low_complexity Low_complexity 1 23 0 660 300 38 68 chr10 62442929 62443299 -83145989 + L2 LINE L2 2871 3229 -43 544 284 168 0 chr10 62443342 62443550 -83145738 - MIR SINE MIR -16 246 4 1967 172 10 0 chr10 62444302 62444610 -83144678 - AluJo SINE Alu -1 311 1 651 241 69 18 chr10 62445322 62445589 -83143699 - Charlie8 DNA MER1_type -2172 245 29 1960 148 17 7 chr10 62447783 62448080 -83141208 - AluJb SINE Alu -12 300 1 186 333 9 54 chr10 62449742 62449853 -83139435 - MER5A DNA MER1_type -68 121 16 599 192 7 33 chr10 62450314 62450465 -83138823 - L1PA16 LINE L1 -9 6157 6011 2122 151 24 16 chr10 62451138 62451510 -83137778 + THE1C LTR MaLR 1 375 0 1179 133 0 0 chr10 62452147 62452312 -83136976 - AluSg/x SINE Alu -11 299 135 180 0 0 0 chr10 62452312 62452332 -83136956 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2152 85 7 3 chr10 62452332 62452615 -83136673 - AluSp SINE Alu -29 284 1 1298 163 107 45 chr10 62452621 62452910 -83136378 - AluSx SINE Alu -5 307 1 2293 125 12 26 chr10 62452914 62452995 -83136293 - L1MA5 LINE L1 -7 6293 6212 2946 157 35 58 chr10 62452995 62453621 -83135667 - LTR9 LTR ERV1 0 612 1 2293 125 12 26 chr10 62453621 62453962 -83135326 - L1MA5 LINE L1 -88 6212 5877 264 342 63 9 chr10 62454083 62454194 -83135094 + L2 LINE L2 3150 3266 -6 549 302 52 57 chr10 62454657 62454905 -83134383 - MIR SINE MIR -8 254 8 1752 186 3 0 chr10 62455460 62455761 -83133527 - AluJo SINE Alu -5 307 6 857 178 6 23 chr10 62456788 62456962 -83132326 + FRAM SINE Alu 1 40 0 2005 137 0 7 chr10 62458232 62458538 -83130750 + AluSx SINE Alu 1 304 -8 348 151 0 2 chr10 62459445 62459502 -83129786 - L1MA1 LINE L1 -413 5878 5823 4103 183 30 24 chr10 62460834 62461698 -83127590 - MER4D LTR ERV1 0 872 4 320 218 11 58 chr10 62464657 62464744 -83124544 - Charlie3 DNA MER1_type -2627 83 1 1876 168 3 3 chr10 62465048 62465357 -83123931 + AluSx SINE Alu 1 309 -3 2108 116 0 14 chr10 62465391 62465685 -83123603 - AluSg SINE Alu -20 290 1 197 65 32 0 chr10 62466308 62466339 -83122949 + (CATTT)n Simple_repeat Simple_repeat 4 35 0 1727 140 12 0 chr10 62466345 62466595 -83122693 - AluSq SINE Alu -60 253 1 1700 176 3 19 chr10 62468027 62468339 -83120949 - AluJo SINE Alu -5 307 1 22 35 0 0 chr10 62468629 62468658 -83120630 + AT_rich Low_complexity Low_complexity 1 29 0 372 299 189 0 chr10 62468854 62468981 -83120307 + MER5A DNA MER1_type 9 159 -30 190 337 54 48 chr10 62469485 62469651 -83119637 + L3 LINE CR1 1208 1374 -203 200 211 0 19 chr10 62471199 62471251 -83118037 + GA-rich Low_complexity Low_complexity 3 53 0 369 271 271 44 chr10 62471306 62471487 -83117801 + MIR SINE MIR 36 257 -5 245 227 0 13 chr10 62471765 62471840 -83117448 + (TA)n Simple_repeat Simple_repeat 1 74 0 29 28 0 0 chr10 62472424 62472460 -83116828 + AT_rich Low_complexity Low_complexity 1 36 0 317 279 145 27 chr10 62472466 62472665 -83116623 - MIR SINE MIR -13 249 23 552 331 105 27 chr10 62472822 62473194 -83116094 - L2 LINE L2 0 3313 2913 246 337 129 0 chr10 62475698 62475799 -83113489 + L2 LINE L2 3200 3313 0 235 98 0 0 chr10 62476309 62476350 -83112938 + Tigger2 DNA MER2_type 2486 2526 -192 240 353 20 0 chr10 62477436 62477538 -83111750 + MIR3 SINE MIR 57 160 -48 2159 139 62 22 chr10 62478436 62478853 -83110435 + Tigger2a DNA MER2_type 1 434 0 28 0 0 0 chr10 62478895 62478923 -83110365 + AT_rich Low_complexity Low_complexity 1 28 0 1211 122 0 47 chr10 62478924 62479138 -83110150 - AluSg/x SINE Alu -24 288 85 240 167 0 0 chr10 62479248 62479284 -83110004 - Alu SINE Alu -266 36 1 357 250 76 30 chr10 62479447 62479579 -83109709 + L1ME4a LINE L1 5268 5405 -716 279 228 134 34 chr10 62479738 62479887 -83109401 + L1ME4a LINE L1 5956 6119 -2 528 248 115 61 chr10 62480742 62481020 -83108268 + LTR33 LTR ERVL 229 521 0 21 0 0 0 chr10 62481888 62481909 -83107379 + AT_rich Low_complexity Low_complexity 1 21 0 182 189 75 19 chr10 62482198 62482251 -83107037 - MIR3 SINE MIR 0 208 153 213 286 36 0 chr10 62482272 62482328 -83106960 - L2 LINE L2 -21 3251 3194 194 411 31 31 chr10 62482510 62482734 -83106554 + L2 LINE L2 2723 2946 -368 347 192 27 103 chr10 62483277 62483423 -83105865 + MIR SINE MIR 126 260 -2 337 252 117 53 chr10 62483490 62483696 -83105592 - L3 LINE CR1 -511 1066 848 24 53 0 0 chr10 62484315 62484353 -83104935 + AT_rich Low_complexity Low_complexity 1 38 0 2267 157 125 0 chr10 62484886 62484948 -83104340 - L1MA9 LINE L1 -1 6311 6258 198 0 0 0 chr10 62484948 62484970 -83104318 + (TA)n Simple_repeat Simple_repeat 1 22 0 * 276 30 0 0 chr10 62484969 62485002 -83104286 + (CA)n Simple_repeat Simple_repeat 2 34 0 2267 157 125 0 chr10 62484970 62485054 -83104234 - L1MA9 LINE L1 -54 6258 6186 270 81 0 0 chr10 62485054 62485091 -83104197 + (TG)n Simple_repeat Simple_repeat 2 38 0 2267 157 125 0 chr10 62485091 62485439 -83103849 - L1MA9 LINE L1 -126 6186 5790 * 6067 235 69 38 chr10 62485438 62487838 -83101450 - L1M1 LINE L1 -4020 2190 1 25 0 0 0 chr10 62488843 62488868 -83100420 + AT_rich Low_complexity Low_complexity 1 25 0 1486 114 129 20 chr10 62489018 62489309 -83099979 + AluSx SINE Alu 1 319 0 189 107 0 0 chr10 62489725 62489753 -83099535 + (A)n Simple_repeat Simple_repeat 1 28 0 206 265 0 0 chr10 62490239 62490288 -83099000 + MIR SINE MIR 119 167 -95 26 30 0 0 chr10 62491092 62491125 -83098163 + AT_rich Low_complexity Low_complexity 1 33 0 221 0 35 0 chr10 62491855 62491884 -83097404 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 21 0 0 0 chr10 62492675 62492696 -83096592 + AT_rich Low_complexity Low_complexity 1 21 0 1046 103 0 45 chr10 62493217 62493373 -83095915 + AluSq/x SINE Alu 1 149 -163 1590 184 61 15 chr10 62493394 62493786 -83095502 + LTR37A LTR ERV1 15 424 -2 2499 65 3 0 chr10 62494387 62494697 -83094591 - AluY SINE Alu 0 311 1 2117 127 0 0 chr10 62495115 62495443 -83093845 + AluSx SINE Alu 1 328 0 288 0 0 0 chr10 62497716 62497748 -83091540 + (A)n Simple_repeat Simple_repeat 1 32 0 198 143 0 0 chr10 62498672 62498707 -83090581 + (A)n Simple_repeat Simple_repeat 1 35 0 267 31 0 0 chr10 62499589 62499621 -83089667 + (CA)n Simple_repeat Simple_repeat 2 33 0 228 35 0 0 chr10 62500668 62500697 -83088591 + (TG)n Simple_repeat Simple_repeat 2 30 0 347 221 89 9 chr10 62500774 62500904 -83088384 + L1P LINE L1 4887 5025 -1121 1520 193 3 25 chr10 62500908 62501224 -83088064 + AluJo SINE Alu 3 312 0 267 227 92 71 chr10 62501452 62501593 -83087695 + MLT1L LTR MaLR 452 595 -20 22 56 0 0 chr10 62502944 62502980 -83086308 + AT_rich Low_complexity Low_complexity 1 36 0 320 271 131 0 chr10 62503722 62503829 -83085459 + HsTC2 DNA Tc2 2 122 -1776 505 169 130 19 chr10 62503874 62504028 -83085260 + HsTC2 DNA Tc2 1725 1895 -3 618 236 127 18 chr10 62505498 62505663 -83083625 + MER5A DNA MER1_type 7 189 0 239 340 30 10 chr10 62505687 62505787 -83083501 - MIR SINE MIR -91 117 16 436 284 45 0 chr10 62506042 62506176 -83083112 + L2 LINE L2 3150 3289 -24 1105 207 9 9 chr10 62506356 62506569 -83082719 - MER58A DNA MER1_type -11 213 1 882 124 51 17 chr10 62506720 62506898 -83082390 + L1MA7 LINE L1 6106 6289 -2 1220 191 104 92 chr10 62508484 62508976 -83080312 + MLT1D LTR MaLR 7 504 -1 612 250 61 6 chr10 62508993 62509157 -83080131 - MIR SINE MIR -75 187 15 36 40 0 0 chr10 62509804 62509854 -83079434 + AT_rich Low_complexity Low_complexity 1 50 0 183 80 0 0 chr10 62510582 62510607 -83078681 + (A)n Simple_repeat Simple_repeat 1 25 0 2250 128 0 0 chr10 62511637 62511943 -83077345 + AluSx SINE Alu 1 306 -6 212 270 66 124 chr10 62512366 62512592 -83076696 + L2 LINE L2 2286 2498 -816 231 279 105 12 chr10 62512655 62512741 -83076547 + MIR SINE MIR 73 166 -96 308 273 8 23 chr10 62512819 62512947 -83076341 - MER103 DNA DNA -33 133 8 350 248 150 9 chr10 62513549 62513662 -83075626 + L2 LINE L2 2963 3091 -181 542 281 129 14 chr10 62514175 62514385 -83074903 - MIR SINE MIR 0 262 29 24 0 0 0 chr10 62514566 62514590 -83074698 + AT_rich Low_complexity Low_complexity 1 24 0 13666 34 12 2 chr10 62514860 62517275 -83072013 + L1PA4 LINE L1 3720 6151 -4 225 0 0 0 chr10 62517426 62517451 -83071837 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 182 323 32 0 chr10 62518442 62518535 -83070753 - L2 LINE L2 -906 2408 2313 507 233 23 62 chr10 62520377 62520553 -83068735 - MIR SINE MIR -91 171 3 267 254 14 42 chr10 62521079 62521150 -83068138 - L2 LINE L2 0 3313 3245 2991 117 9 193 chr10 62521272 62521592 -83067696 + Tigger1 DNA MER2_type 1 378 -2040 1970 148 0 3 chr10 62521592 62521876 -83067412 - AluJb SINE Alu -29 283 1 2991 117 9 193 chr10 62521876 62521933 -83067355 + Tigger1 DNA MER2_type 378 444 -1974 573 15 0 0 chr10 62521933 62521999 -83067289 + (TA)n Simple_repeat Simple_repeat 1 66 0 2991 117 9 193 chr10 62521999 62522425 -83066863 + Tigger1 DNA MER2_type 444 657 -1761 2151 158 22 69 chr10 62522425 62522874 -83066414 + MSTA LTR MaLR 1 428 0 6958 169 66 51 chr10 62522876 62524431 -83064857 + MSTA-int LTR MaLR 3 1580 0 2187 170 27 5 chr10 62524431 62524842 -83064446 + MSTA LTR MaLR 2 421 -7 9938 134 27 19 chr10 62524845 62526598 -83062690 + Tigger1 DNA MER2_type 653 2418 0 1891 179 0 0 chr10 62526774 62527070 -83062218 - AluJb SINE Alu -16 296 1 26 64 0 0 chr10 62527142 62527189 -83062099 + AT_rich Low_complexity Low_complexity 1 47 0 244 296 143 48 chr10 62527902 62528091 -83061197 + MIR SINE MIR 43 249 -13 309 89 0 0 chr10 62529955 62530000 -83059288 + (CA)n Simple_repeat Simple_repeat 2 46 0 180 377 123 34 chr10 62530544 62531107 -83058181 + L2 LINE L2 808 1420 -1894 199 257 14 95 chr10 62531204 62531278 -83058010 - L2 LINE L2 -9 3304 3237 449 315 62 38 chr10 62532999 62533291 -83055997 - LTR16C LTR ERVL -2 489 191 974 301 49 10 chr10 62534039 62534445 -83054843 - MER90 LTR ERV1 -4 571 150 779 63 16 56 chr10 62534740 62534866 -83054422 + Alu SINE Alu 178 298 -13 280 327 96 40 chr10 62534910 62535109 -83054179 - L2 LINE L2 -191 3081 2872 248 235 0 24 chr10 62535545 62535630 -83053658 + (CACG)n Simple_repeat Simple_repeat 1 83 0 1866 185 43 3 chr10 62535908 62536259 -83053029 + MLT1A1 LTR MaLR 1 365 0 397 243 130 65 chr10 62536530 62536827 -83052461 + L1MB7 LINE L1 5535 5859 -325 250 278 11 11 chr10 62538114 62538204 -83051084 + CT-rich Low_complexity Low_complexity 2 91 0 1167 96 42 12 chr10 62539284 62539450 -83049838 - AluSg/x SINE Alu -10 302 132 1093 193 24 0 chr10 62540233 62540445 -83048843 - MER20 DNA MER1_type 0 219 3 345 320 108 30 chr10 62540785 62540988 -83048300 + MIR SINE MIR 28 246 -16 561 150 31 63 chr10 62541417 62541544 -83047744 - L1MC1 LINE L1 -1 6332 6210 4601 158 22 12 chr10 62541563 62542464 -83046824 - L1MC1 LINE L1 -229 6104 5197 194 176 0 59 chr10 62542924 62542975 -83046313 - L2 LINE L2 0 3313 3266 385 238 99 0 chr10 62543036 62543208 -83046080 + L1ME LINE L1 5559 5747 -374 841 169 11 45 chr10 62543271 62543448 -83045840 + MER20 DNA MER1_type 49 219 0 1758 156 15 12 chr10 62543571 62543910 -83045378 + L1MA4 LINE L1 5954 6293 -7 211 298 137 16 chr10 62544554 62544678 -83044610 + L2 LINE L2 2909 3047 -225 28 48 0 0 chr10 62544715 62544757 -83044531 + AT_rich Low_complexity Low_complexity 1 42 0 5976 120 15 54 chr10 62544972 62545296 -83043992 - L1MC1 LINE L1 0 6333 5998 1719 129 0 0 chr10 62545296 62545537 -83043751 - AluSx SINE Alu -11 301 61 5976 120 15 54 chr10 62545537 62546075 -83043213 - L1MC1 LINE L1 -335 5998 5523 1073 192 22 134 chr10 62546075 62546486 -83042802 - MLT1A1 LTR MaLR 0 365 1 5976 120 15 54 chr10 62546486 62546756 -83042532 - L1MC1 LINE L1 -810 5523 5244 1556 151 88 22 chr10 62546757 62547074 -83042214 - MER1B DNA MER1_type -1 338 1 1313 193 9 120 chr10 62547074 62547245 -83042043 - L1MC1 LINE L1 -895 5251 5063 813 94 17 0 chr10 62547245 62547362 -83041926 + L1PA11 LINE L1 6045 6163 -11 1313 193 9 120 chr10 62547362 62547765 -83041523 - L1MC1 LINE L1 -1083 5063 4741 2103 102 42 0 chr10 62547847 62548130 -83041158 - AluSx SINE Alu -17 295 1 271 327 48 10 chr10 62548503 62548607 -83040681 + MIR SINE MIR 20 127 -81 630 249 16 36 chr10 62549032 62549225 -83040063 - MIR SINE MIR -11 251 63 1982 192 78 2 chr10 62549253 62549649 -83039639 - MSTB LTR MaLR 0 426 1 239 330 11 11 chr10 62549653 62549744 -83039544 + L2 LINE L2 3222 3312 -1 203 256 39 90 chr10 62549923 62550001 -83039287 - MIR3 SINE MIR -125 83 10 257 365 68 20 chr10 62550704 62551029 -83038259 - L2 LINE L2 -182 3090 2752 1475 182 30 61 chr10 62552983 62553280 -83036008 - AluJo SINE Alu -24 288 1 187 284 174 18 chr10 62554762 62554871 -83034417 + L3b LINE CR1 1323 1448 -135 693 197 98 5 chr10 62555319 62555512 -83033776 + MER90 LTR ERV1 399 609 -5 496 337 11 11 chr10 62555681 62555868 -83033420 - MIR SINE MIR -6 256 70 409 350 12 12 chr10 62556558 62556721 -83032567 + MIR SINE MIR 2 164 -98 1285 273 153 6 chr10 62556741 62557243 -83032045 + MLT1K LTR MaLR 13 588 0 410 247 0 0 chr10 62557244 62557337 -83031951 + MIR SINE MIR 160 252 -10 1803 134 22 75 chr10 62557663 62557983 -83031305 - AluJo SINE Alu -8 304 2 746 216 16 54 chr10 62558700 62558885 -83030403 - MER45A DNA AcHobo 0 178 1 2196 75 24 20 chr10 62560348 62560643 -83028645 - AluY SINE Alu -12 299 4 362 194 45 119 chr10 62561280 62561414 -83027874 + MER5C DNA MER1_type 1 124 -200 392 220 88 0 chr10 62561423 62561514 -83027774 + MER5C DNA MER1_type 225 323 -1 27 0 0 0 chr10 62561645 62561672 -83027616 + AT_rich Low_complexity Low_complexity 1 27 0 1534 188 3 37 chr10 62562229 62562527 -83026761 - AluJo SINE Alu -24 288 1 399 306 100 0 chr10 62563771 62563931 -83025357 - MIR SINE MIR 0 262 87 363 293 131 14 chr10 62564213 62564435 -83024853 - MARNA DNA Mariner -45 541 294 2010 147 7 3 chr10 62564640 62564940 -83024348 - AluSx SINE Alu -11 301 1 278 223 146 10 chr10 62565084 62565187 -83024101 + L2 LINE L2 3192 3308 -5 23 33 0 0 chr10 62565189 62565219 -83024069 + AT_rich Low_complexity Low_complexity 1 30 0 198 0 0 0 chr10 62565790 62565812 -83023476 + (A)n Simple_repeat Simple_repeat 1 22 0 279 0 0 0 chr10 62568097 62568128 -83021160 + (A)n Simple_repeat Simple_repeat 1 31 0 15301 135 43 18 chr10 62569101 62570534 -83018754 - Tigger2 DNA MER2_type 0 2718 1187 2299 92 6 25 chr10 62570534 62570850 -83018438 - AluY SINE Alu -1 310 1 15301 135 43 18 chr10 62570850 62572068 -83017220 - Tigger2 DNA MER2_type -1531 1187 1 431 251 154 23 chr10 62572923 62573098 -83016190 - MIR SINE MIR 0 262 65 24 0 0 0 chr10 62574843 62574867 -83014421 + AT_rich Low_complexity Low_complexity 1 24 0 309 299 121 35 chr10 62575391 62575565 -83013723 - MIR3 SINE MIR -4 204 16 327 180 30 22 chr10 62577547 62577628 -83011660 + MIR SINE MIR 8 86 -122 1006 179 77 0 chr10 62578085 62578280 -83011008 - MER58A DNA MER1_type -14 210 1 450 0 0 0 chr10 62580524 62580574 -83008714 + (CA)n Simple_repeat Simple_repeat 1 50 0 301 308 0 53 chr10 62580921 62581054 -83008234 - L2 LINE L2 -1137 2177 2052 279 231 52 67 chr10 62581154 62581288 -83008000 + MER94 DNA DNA 2 133 -1 802 193 6 9 chr10 62581304 62581498 -83007790 + MER33 DNA MER1_type 1 179 -89 1719 156 0 49 chr10 62582513 62582821 -83006467 - AluJo SINE Alu -19 293 1 334 269 0 43 chr10 62582888 62582981 -83006307 - L2 LINE L2 0 3272 3184 200 311 49 0 chr10 62582977 62583038 -83006250 + L2 LINE L2 3209 3272 0 * 448 364 168 43 chr10 62584234 62584542 -83004746 + L2 LINE L2 1941 2209 -1104 2416 107 3 0 chr10 62584542 62584852 -83004436 + AluSx SINE Alu 1 311 -1 448 364 168 43 chr10 62584852 62585749 -83003539 + L2 LINE L2 2209 3313 0 257 314 97 40 chr10 62587236 62587360 -83001928 + MER5A DNA MER1_type 35 165 -24 247 333 0 0 chr10 62587454 62587529 -83001759 + MIR3 SINE MIR 86 160 -48 961 135 0 0 chr10 62587779 62587920 -83001368 + AluJb SINE Alu 1 141 -171 27 77 0 22 chr10 62587937 62588000 -83001288 + AT_rich Low_complexity Low_complexity 1 63 -26 1743 111 11 48 chr10 62588000 62588271 -83001017 + AluSx SINE Alu 16 276 -36 27 77 0 22 chr10 62588271 62588298 -83000990 + AT_rich Low_complexity Low_complexity 63 89 0 1994 145 3 3 chr10 62588303 62588600 -83000688 + AluSx SINE Alu 1 297 -15 389 323 0 0 chr10 62591604 62591734 -82997554 + MER94 DNA DNA 1 130 -4 269 258 11 56 chr10 62591880 62591969 -82997319 - L2 LINE L2 0 3313 3229 2080 127 0 0 chr10 62591995 62592307 -82996981 - AluSx SINE Alu 0 312 1 1865 151 3 16 chr10 62592772 62593084 -82996204 - AluJb SINE Alu -4 308 1 623 268 121 21 chr10 62594312 62594502 -82994786 - MIR SINE MIR -23 239 31 213 350 85 34 chr10 62595003 62595338 -82993950 - L2 LINE L2 -173 3099 2592 21 36 0 0 chr10 62596124 62596152 -82993136 + AT_rich Low_complexity Low_complexity 1 28 0 2849 193 6 11 chr10 62597179 62597823 -82991465 + L1 LINE L1 4364 5004 -1142 439 113 0 0 chr10 62597824 62597895 -82991393 + L1PA16 LINE L1 6095 6165 -1 285 286 0 0 chr10 62598423 62598486 -82990802 - MIR3 SINE MIR -15 193 131 259 299 195 23 chr10 62601181 62601355 -82987933 - MIR SINE MIR -12 250 47 21 36 0 0 chr10 62602093 62602121 -82987167 + AT_rich Low_complexity Low_complexity 1 28 0 326 325 108 41 chr10 62602389 62602583 -82986705 - L1ME LINE L1 -465 5697 5491 2009 154 0 3 chr10 62602598 62602897 -82986391 + AluJb SINE Alu 1 298 -14 405 0 0 0 chr10 62603107 62603152 -82986136 + (CA)n Simple_repeat Simple_repeat 2 46 0 1146 155 44 0 chr10 62603382 62603588 -82985700 - MER46A DNA MER2_type 0 236 22 2372 104 8 25 chr10 62604391 62604756 -82984532 - MER1A DNA MER1_type 0 529 171 1744 169 54 3 chr10 62605150 62605329 -82983959 - AluJb SINE Alu -2 310 109 300 27 0 0 chr10 62605329 62605366 -82983922 + (TG)n Simple_repeat Simple_repeat 2 38 0 1744 169 54 3 chr10 62605366 62605481 -82983807 - AluJb SINE Alu -203 109 1 441 234 17 120 chr10 62605735 62605910 -82983378 - MIR SINE MIR -55 207 51 1048 206 57 9 chr10 62606655 62606883 -82982405 + MER66B LTR ERV1 28 266 -220 1842 128 37 4 chr10 62606885 62607158 -82982130 + AluSx SINE Alu 3 284 -28 279 282 136 18 chr10 62608201 62608311 -82980977 - MIR SINE MIR -79 183 61 518 165 286 15 chr10 62608878 62609011 -82980277 + MER5A DNA MER1_type 21 189 0 1537 163 36 59 chr10 62609812 62610118 -82979170 - AluJb SINE Alu -13 299 1 2258 79 7 3 chr10 62610399 62610690 -82978598 + AluSq SINE Alu 2 293 -20 448 265 34 0 chr10 62611350 62611467 -82977821 + MIR SINE MIR 17 137 -125 573 191 0 0 chr10 62611472 62611587 -82977701 + (CATATA)n Simple_repeat Simple_repeat 2 116 0 6090 120 13 8 chr10 62611589 62612794 -82976494 - L1MA1 LINE L1 -85 6217 5006 551 264 115 0 chr10 62612869 62613017 -82976271 + MIR SINE MIR 65 229 -33 3588 47 0 7 chr10 62615182 62615633 -82973655 - LTR7 LTR ERV1 -2 448 1 2416 78 48 0 chr10 62615633 62616005 -82973283 - HERVH LTR ERV1 0 7713 7324 1296 128 18 14 chr10 62616005 62616224 -82973064 - HERVH LTR ERV1 -1894 5819 5600 4183 138 1 1 chr10 62616225 62616887 -82972401 - HERVH LTR ERV1 -2564 5149 4488 3203 113 0 6 chr10 62616889 62617394 -82971894 - HERVH LTR ERV1 -3720 3993 3492 919 127 7 0 chr10 62617384 62617534 -82971754 - HERVH LTR ERV1 -4423 3290 3140 * 18911 92 9 35 chr10 62617513 62620185 -82969103 - HERVH LTR ERV1 -4718 2995 408 4040 34 0 0 chr10 62620185 62620662 -82968626 - L1PA3 LINE L1 0 6155 5679 18911 92 9 35 chr10 62620662 62621061 -82968227 - HERVH LTR ERV1 -7305 408 1 3524 55 0 7 chr10 62621063 62621514 -82967774 - LTR7 LTR ERV1 -2 448 1 254 283 43 22 chr10 62623367 62623459 -82965829 + 7SK RNA RNA 5 98 -95 293 218 99 55 chr10 62623649 62623851 -82965437 + L1M4 LINE L1 5034 5244 -902 * 948 225 178 17 chr10 62623842 62624304 -82964984 - L1MEc LINE L1 -5324 1072 537 206 290 86 21 chr10 62624371 62624464 -82964824 - MER5B DNA MER1_type -79 99 1 404 281 78 24 chr10 62624469 62625085 -82964203 - L1ME LINE L1 -513 5720 5078 2002 156 0 16 chr10 62625649 62625963 -82963325 + AluJb SINE Alu 1 309 -3 298 276 168 88 chr10 62626601 62626941 -82962347 - L2 LINE L2 -2 3311 2945 377 327 83 6 chr10 62627563 62627719 -82961569 + HAL1 LINE L1 782 949 -1558 254 268 65 22 chr10 62627719 62627857 -82961431 + HAL1b LINE L1 748 891 -457 282 113 32 16 chr10 62627925 62627987 -82961301 + GA-rich Low_complexity Low_complexity 2 64 0 257 326 114 30 chr10 62628928 62629060 -82960228 + L2 LINE L2 3078 3220 -52 1190 268 74 44 chr10 62629174 62630124 -82959164 - L1MEc LINE L1 -2681 3534 2561 1929 142 22 19 chr10 62630124 62630435 -82958853 - AluSx SINE Alu 0 312 1 1190 268 74 44 chr10 62630435 62630866 -82958422 - L1MEc LINE L1 -3654 2561 2145 2296 75 7 3 chr10 62630870 62631163 -82958125 - AluY SINE Alu -17 294 1 300 325 75 33 chr10 62631196 62631436 -82957852 - L1MEc LINE L1 -4164 2051 1802 794 305 64 32 chr10 62631458 62632208 -82957080 - L1MEc LINE L1 -4608 1788 1015 596 246 131 63 chr10 62633188 62633305 -82955983 + MLT1G LTR MaLR 15 123 -432 3089 168 72 6 chr10 62633305 62633941 -82955347 - LTR58 LTR ERV1 -1 678 1 596 246 131 63 chr10 62633941 62634336 -82954952 + MLT1G LTR MaLR 123 555 0 990 251 110 72 chr10 62635381 62635910 -82953378 - MLT1H LTR MaLR 0 549 1 318 348 15 22 chr10 62635970 62636105 -82953183 - L2 LINE L2 -221 3051 2918 378 239 231 8 chr10 62636282 62636412 -82952876 + MIR SINE MIR 29 187 -75 306 0 0 0 chr10 62636836 62636870 -82952418 + (T)n Simple_repeat Simple_repeat 1 34 0 233 348 76 11 chr10 62637272 62637364 -82951924 - L2 LINE L2 -15 3298 3201 238 288 0 30 chr10 62637493 62637559 -82951729 + L2 LINE L2 3229 3292 -21 216 111 0 0 chr10 62637564 62637600 -82951688 + (TTCA)n Simple_repeat Simple_repeat 2 37 0 1608 248 108 35 chr10 62637618 62638222 -82951066 + MER21B LTR ERV1 15 662 -201 180 0 0 0 chr10 62638222 62638242 -82951046 + (AATTG)n Simple_repeat Simple_repeat 1 20 0 261 260 132 28 chr10 62638936 62639186 -82950102 + L1ME4a LINE L1 5729 6004 -117 213 288 51 68 chr10 62640685 62640803 -82948485 - MER5A DNA MER1_type -22 167 52 231 232 0 54 chr10 62641401 62641457 -82947831 + MER5B DNA MER1_type 2 54 -124 240 193 0 35 chr10 62641826 62641883 -82947405 + (TA)n Simple_repeat Simple_repeat 1 55 0 291 259 0 0 chr10 62641884 62641969 -82947319 - L1MC4 LINE L1 -1341 6701 6617 2028 87 0 29 chr10 62642017 62642294 -82946994 + AluY SINE Alu 38 306 -5 304 217 11 43 chr10 62642294 62642376 -82946912 - L1MC4 LINE L1 -1347 6695 6615 * 315 244 22 22 chr10 62642335 62642425 -82946863 + L1MC4 LINE L1 6614 6703 -1339 270 0 0 0 chr10 62642426 62642474 -82946814 + (TG)n Simple_repeat Simple_repeat 1 78 0 270 0 0 0 chr10 62642474 62642504 -82946784 + (TG)n Simple_repeat Simple_repeat 2 31 0 1906 94 0 29 chr10 62642517 62642792 -82946496 - AluY SINE Alu -7 304 38 301 250 73 0 chr10 62642805 62642901 -82946387 - L1M4 LINE L1 -3670 2476 2374 5745 241 128 21 chr10 62643011 62643340 -82945948 - L1MD3 LINE L1 -8 7987 7694 2125 128 35 41 chr10 62643340 62643706 -82945582 + THE1B LTR MaLR 1 364 0 5745 241 128 21 chr10 62643706 62645493 -82943795 - L1MD3 LINE L1 -301 7694 5645 445 145 170 107 chr10 62645493 62645652 -82943636 - MLT2D LTR ERVL 0 414 246 844 170 0 0 chr10 62645652 62645793 -82943495 - ERVL LTR ERVL -1137 4627 4487 723 424 120 41 chr10 62645818 62645872 -82943416 - MLT2C1 LTR ERVL -2 395 347 2208 74 3 0 chr10 62645872 62646179 -82943109 - AluY SINE Alu 0 308 1 723 424 120 41 chr10 62646179 62646489 -82942799 - MLT2C1 LTR ERVL -50 347 1 1321 249 48 19 chr10 62646489 62647170 -82942118 - L1MD3 LINE L1 -520 5646 4941 291 97 2 0 chr10 62647204 62647254 -82942034 + MSTA LTR MaLR 259 318 -114 1805 214 60 11 chr10 62647351 62647899 -82941389 - L1M4 LINE L1 -813 5333 4759 183 318 32 16 chr10 62648221 62648284 -82941004 - MER5B DNA MER1_type -20 158 95 21 0 0 0 chr10 62648455 62648476 -82940812 + AT_rich Low_complexity Low_complexity 1 21 0 663 275 110 4 chr10 62648600 62648967 -82940321 - LTR16C LTR ERVL -9 482 37 1241 300 91 5 chr10 62649083 62649523 -82939765 - L2 LINE L2 -7 3306 2829 182 324 29 0 chr10 62649583 62649651 -82939637 - L2 LINE L2 -653 2661 2592 452 261 82 23 chr10 62650725 62650877 -82938411 + MIR SINE MIR 7 163 -65 2270 65 0 14 chr10 62652176 62652469 -82936819 - AluY SINE Alu -16 295 7 2081 117 3 19 chr10 62653612 62653921 -82935367 - AluSx SINE Alu -8 304 1 1973 143 3 17 chr10 62653930 62654230 -82935058 - AluSx SINE Alu -16 296 1 559 317 139 4 chr10 62654423 62654653 -82934635 + MIR SINE MIR 2 262 0 698 263 67 42 chr10 62654822 62655179 -82934109 + L1ME LINE L1 5378 5743 -378 465 147 9 26 chr10 62657371 62657487 -82931801 + CT-rich Low_complexity Low_complexity 3 116 0 253 226 0 0 chr10 62658649 62658702 -82930586 - L2 LINE L2 -2 3270 3218 1657 303 91 43 chr10 62658914 62659947 -82929341 - HERV16 LTR ERVL -3601 1395 313 341 257 9 111 chr10 62660011 62660089 -82929199 - MLT1G LTR MaLR -7 583 499 2056 138 10 0 chr10 62660089 62660378 -82928910 - AluSx SINE Alu -17 295 4 341 257 9 111 chr10 62660378 62660525 -82928763 - MLT1G LTR MaLR -91 499 381 1112 180 15 0 chr10 62660545 62660745 -82928543 + MER20 DNA MER1_type 17 219 0 458 196 226 8 chr10 62660745 62660878 -82928410 - MLT1G LTR MaLR -207 383 222 627 240 34 11 chr10 62661014 62661189 -82928099 - MLT1G LTR MaLR -411 179 1 580 314 30 4 chr10 62661190 62661426 -82927862 - HERV16 LTR ERVL -4753 243 2 780 317 56 42 chr10 62661427 62661856 -82927432 - LTR16A LTR ERVL 0 450 16 508 219 139 0 chr10 62662583 62662734 -82926554 - MER96 DNA MER1_type? 0 175 4 1011 180 6 0 chr10 62662970 62663131 -82926157 - AluJo/FRAM SINE Alu -5 307 146 466 289 0 53 chr10 62663131 62663318 -82925970 - AluJb SINE Alu -133 179 3 225 360 0 0 chr10 62664307 62664382 -82924906 + MIR SINE MIR 21 95 -167 2300 112 0 0 chr10 62664396 62664701 -82924587 - AluSx SINE Alu -7 305 1 7435 254 25 16 chr10 62664751 62666814 -82922474 - L1PA12 LINE L1 -5512 2069 1 262 222 61 15 chr10 62666993 62667073 -82922215 - MIR3 SINE MIR -46 162 76 561 274 98 10 chr10 62667229 62667535 -82921753 + L1MEd LINE L1 903 1235 -4884 355 261 231 15 chr10 62667580 62667775 -82921513 + L1MEd LINE L1 1349 1585 -4725 805 167 88 15 chr10 62667790 62667994 -82921294 - Charlie4 DNA MER1_type -3 1958 1740 2327 160 18 61 chr10 62668601 62669046 -82920242 - MSTB LTR MaLR 0 426 1 1811 171 10 23 chr10 62669729 62670038 -82919250 + AluJo SINE Alu 1 305 -7 2389 121 47 10 chr10 62670629 62671034 -82918254 - MSTA LTR MaLR -8 420 1 1659 260 51 101 chr10 62671765 62672550 -82916738 + L2 LINE L2 2148 2893 -421 236 28 56 0 chr10 62675080 62675116 -82914172 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 25 51 0 0 chr10 62675722 62675761 -82913527 + AT_rich Low_complexity Low_complexity 1 39 0 237 132 0 0 chr10 62677884 62677922 -82911366 + (GAA)n Simple_repeat Simple_repeat 3 40 0 401 81 16 0 chr10 62678238 62678300 -82910988 + (GA)n Simple_repeat Simple_repeat 2 64 0 345 259 115 35 chr10 62680044 62680202 -82909086 + MIR SINE MIR 19 188 -74 639 171 21 71 chr10 62680266 62680406 -82908882 + FLAM_C SINE Alu 1 133 0 246 333 111 0 chr10 62680442 62680550 -82908738 + L3 LINE CR1 1455 1574 -3 317 314 138 11 chr10 62680630 62680818 -82908470 - MIR SINE MIR -48 214 3 300 268 22 120 chr10 62682183 62682366 -82906922 - MER102a DNA MER1_type 0 330 166 1042 176 16 5 chr10 62682404 62682591 -82906697 + MLT1A1 LTR MaLR 1 189 -176 590 271 54 73 chr10 62682594 62683004 -82906284 - L2 LINE L2 -107 3206 2805 1256 114 0 10 chr10 62683023 62683216 -82906072 + MLT2A1 LTR ERVL 1 191 -253 207 0 0 0 chr10 62683340 62683363 -82905925 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 221 333 158 17 chr10 62685080 62685257 -82904031 + MIR SINE MIR 47 248 -14 266 337 37 43 chr10 62685361 62685524 -82903764 - L3 LINE CR1 -11 1566 1405 359 238 80 60 chr10 62685566 62685717 -82903571 - MIR SINE MIR -42 220 67 344 284 11 11 chr10 62686085 62686173 -82903115 + L2 LINE L2 3184 3271 -1 359 330 155 17 chr10 62687529 62687768 -82901520 + L1MA5 LINE L1 493 764 -6445 12953 187 33 16 chr10 62687842 62688584 -82900704 + L1MA5 LINE L1 1717 2445 -4917 3584 109 4 4 chr10 62688584 62689098 -82900190 + MER75 DNA T2_type 1 514 0 12953 187 33 16 chr10 62689098 62693902 -82895386 + L1MA5 LINE L1 2445 7362 0 189 0 0 0 chr10 62693950 62693971 -82895317 + (A)n Simple_repeat Simple_repeat 1 21 0 265 191 21 0 chr10 62694390 62694437 -82894851 + MER5B DNA MER1_type 2 49 -129 3528 204 109 83 chr10 62694545 62695128 -82894160 - L1MC3 LINE L1 -7 7778 7211 271 250 11 65 chr10 62695128 62695220 -82894068 - MLT1F1 LTR MaLR -445 122 36 3528 204 109 83 chr10 62695220 62695936 -82893352 - L1MC3 LINE L1 -574 7211 6353 214 254 36 18 chr10 62695936 62695991 -82893297 + MER5B DNA MER1_type 52 107 -71 510 316 151 5 chr10 62696095 62696307 -82892981 + MIR SINE MIR 20 262 0 698 263 67 42 chr10 62696476 62696833 -82892455 + L1ME LINE L1 5378 5743 -378 378 239 231 8 chr10 62699240 62699370 -82889918 - MIR SINE MIR -75 187 29 318 348 15 22 chr10 62699546 62699681 -82889607 + L2 LINE L2 2918 3051 -221 990 251 110 72 chr10 62699741 62700270 -82889018 + MLT1H LTR MaLR 1 549 0 596 246 131 65 chr10 62701315 62701710 -82887578 - MLT1G LTR MaLR 0 555 123 3089 168 72 6 chr10 62701710 62702346 -82886942 + LTR58 LTR ERV1 1 678 -1 596 246 131 65 chr10 62702346 62702463 -82886825 - MLT1G LTR MaLR -432 123 15 794 305 64 32 chr10 62703443 62704193 -82885095 + L1MEc LINE L1 1015 1788 -4608 300 325 75 33 chr10 62704215 62704455 -82884833 + L1MEc LINE L1 1802 2051 -4164 2296 75 7 3 chr10 62704488 62704781 -82884507 + AluY SINE Alu 1 294 -17 1190 268 74 44 chr10 62704785 62705216 -82884072 + L1MEc LINE L1 2145 2561 -3654 1929 142 22 19 chr10 62705216 62705527 -82883761 + AluSx SINE Alu 1 312 0 1190 268 74 44 chr10 62705527 62706477 -82882811 + L1MEc LINE L1 2561 3534 -2681 404 327 67 79 chr10 62706591 62706982 -82882306 - L2 LINE L2 -52 3220 2835 1600 154 0 0 chr10 62707088 62707322 -82881966 + AluSx SINE Alu 1 234 -78 227 290 48 0 chr10 62708665 62708727 -82880561 - L2 LINE L2 -2 3311 3247 288 164 27 127 chr10 62708842 62708952 -82880336 - MER103 DNA DNA -66 100 2 543 212 0 53 chr10 62709886 62710018 -82879270 + Tigger7 DNA MER2_type 4 128 -2359 1440 160 44 35 chr10 62710019 62710337 -82878951 + Tigger7 DNA MER2_type 2167 2487 0 284 289 59 128 chr10 62710690 62710877 -82878411 - L2 LINE L2 -190 3082 2909 2118 198 55 34 chr10 62710927 62711422 -82877866 - MLT1D LTR MaLR 0 505 1 25 31 0 0 chr10 62711876 62711908 -82877380 + AT_rich Low_complexity Low_complexity 1 32 0 2260 101 0 3 chr10 62711944 62712241 -82877047 - AluSc SINE Alu -13 296 1 390 296 37 15 chr10 62712402 62712537 -82876751 - MIR3 SINE MIR -48 160 23 788 354 90 25 chr10 62713643 62714428 -82874860 - L2 LINE L2 -1604 1710 875 233 180 60 0 chr10 62714440 62714490 -82874798 - LTR45 LTR ERV1 -347 178 126 268 263 62 0 chr10 62714517 62714597 -82874691 - L2 LINE L2 -2548 766 682 197 326 147 16 chr10 62714656 62714785 -82874503 - L2 LINE L2 -2801 513 368 230 185 111 0 chr10 62714793 62714847 -82874441 + MIR SINE MIR 133 192 -70 21 0 0 0 chr10 62714867 62714888 -82874400 + AT_rich Low_complexity Low_complexity 1 21 0 703 272 87 0 chr10 62714921 62715127 -82874161 - MIR SINE MIR -28 234 11 22 0 0 0 chr10 62716705 62716727 -82872561 + AT_rich Low_complexity Low_complexity 1 22 0 348 324 23 6 chr10 62717262 62717422 -82871866 + MIR3 SINE MIR 20 186 -22 521 326 69 60 chr10 62717777 62718210 -82871078 - L2 LINE L2 0 3272 2836 1482 104 59 0 chr10 62718352 62718554 -82870734 + AluSc SINE Alu 85 298 -11 2642 91 19 3 chr10 62718603 62718965 -82870323 - MER39 LTR ERV1 0 707 340 4356 148 7 24 chr10 62718970 62719679 -82869609 + MER50 LTR ERV1 1 697 -37 1242 160 63 48 chr10 62719702 62719970 -82869318 - MER39 LTR ERV1 -433 274 3 180 0 0 0 chr10 62724045 62724065 -82865223 + (TTTTTG)n Simple_repeat Simple_repeat 4 23 0 228 261 153 0 chr10 62724092 62724203 -82865085 - L1MC4 LINE L1 -1 8041 7914 1799 210 100 15 chr10 62724286 62724796 -82864492 - L1ME2 LINE L1 -20 6144 5667 641 305 37 34 chr10 62724792 62725087 -82864201 - L1MC4a LINE L1 -136 7672 7377 * 1789 221 107 28 chr10 62725106 62725175 -82864113 + MLT1F LTR MaLR 10 72 -470 3678 153 8 52 chr10 62725175 62725815 -82863473 + LTR9 LTR ERV1 1 612 0 1789 221 107 28 chr10 62725815 62726239 -82863049 + MLT1F LTR MaLR 72 542 0 1234 263 92 20 chr10 62726239 62726748 -82862540 - L1MC4 LINE L1 -591 7451 6906 470 178 22 111 chr10 62726857 62726992 -82862296 - L2 LINE L2 -4 3309 3187 1020 232 38 0 chr10 62727738 62727949 -82861339 + MER20 DNA MER1_type 1 219 0 208 228 70 35 chr10 62728892 62728949 -82860339 + L2 LINE L2 3250 3308 -5 1391 225 110 48 chr10 62729001 62729091 -82860197 - MER34B LTR ERV1 -3 562 479 195 42 0 0 chr10 62729091 62729115 -82860173 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1391 225 110 48 chr10 62729115 62729544 -82859744 - MER34B LTR ERV1 -86 479 11 200 228 120 84 chr10 62729793 62729960 -82859328 + L2 LINE L2 2830 3002 -270 682 226 126 6 chr10 62729980 62730139 -82859149 + MER5B DNA MER1_type 1 178 0 424 200 17 113 chr10 62730176 62730291 -82858997 - MER5A DNA MER1_type -77 112 9 1013 191 11 21 chr10 62730323 62730512 -82858776 + MER5A DNA MER1_type 1 187 -2 394 286 83 83 chr10 62730512 62730752 -82858536 + L2 LINE L2 3032 3271 -1 539 266 34 51 chr10 62731439 62731616 -82857672 + MER5B DNA MER1_type 5 178 0 22 56 0 0 chr10 62732085 62732121 -82857167 + AT_rich Low_complexity Low_complexity 1 36 0 467 306 50 6 chr10 62733604 62733784 -82855504 + MER117 DNA MER1_type 1 188 -9 1894 189 175 25 chr10 62734468 62734734 -82854554 + MLT1D LTR MaLR 1 226 -279 2387 137 6 6 chr10 62734734 62735071 -82854217 - MER1B DNA MER1_type 0 337 1 1894 189 175 25 chr10 62735071 62735243 -82854045 + MLT1D LTR MaLR 226 505 0 1482 215 34 0 chr10 62735625 62735923 -82853365 - AluJo SINE Alu -4 308 1 323 302 32 63 chr10 62736104 62736230 -82853058 + L2 LINE L2 3151 3272 0 301 222 50 10 chr10 62736393 62736492 -82852796 + L1ME4a LINE L1 6018 6120 -1 620 241 108 22 chr10 62736659 62736891 -82852397 + MIR SINE MIR 11 262 0 379 282 0 0 chr10 62737060 62737163 -82852125 + MIR3 SINE MIR 105 207 -1 191 103 26 0 chr10 62738096 62738135 -82851153 + (CAA)n Simple_repeat Simple_repeat 1 40 0 306 247 25 0 chr10 62738636 62738717 -82850571 + MIR SINE MIR 89 171 -91 1737 169 72 77 chr10 62738720 62738924 -82850364 - MER31B LTR ERV1 0 543 340 5793 137 13 18 chr10 62738924 62739240 -82850048 + MER4D LTR ERV1 1 317 -586 2205 124 3 3 chr10 62739240 62739547 -82849741 - AluSx SINE Alu -5 307 1 5793 137 13 18 chr10 62739547 62740137 -82849151 + MER4D LTR ERV1 317 903 0 1737 169 72 77 chr10 62740137 62740400 -82848888 - MER31B LTR ERV1 -203 340 1 1695 144 13 7 chr10 62740533 62740832 -82848456 - L1 LINE L1 -787 5359 5059 1335 163 19 27 chr10 62740838 62741096 -82848192 + AluJb SINE Alu 1 256 -56 492 224 20 0 chr10 62741097 62741195 -82848093 + AluJb SINE Alu 208 307 -5 3810 127 129 78 chr10 62741250 62742118 -82847170 + L1MA9 LINE L1 5369 6280 -32 741 265 32 116 chr10 62742138 62742214 -82847074 - L2 LINE L2 0 3313 3232 1323 207 37 70 chr10 62742214 62742513 -82846775 - AluJb SINE Alu -13 289 1 741 265 32 116 chr10 62742513 62742814 -82846474 - L2 LINE L2 -81 3232 2968 227 208 102 188 chr10 62742960 62743038 -82846250 - MIR SINE MIR -6 256 173 2105 128 3 82 chr10 62743038 62743404 -82845884 - MER1B DNA MER1_type 0 337 1 227 208 102 188 chr10 62743404 62743522 -82845766 - MIR SINE MIR -89 173 77 567 240 0 0 chr10 62743999 62744099 -82845189 + FLAM_A SINE Alu 2 101 -41 246 288 115 36 chr10 62744256 62744395 -82844893 - MIR SINE MIR -93 169 20 207 279 62 93 chr10 62746081 62746242 -82843046 + MIR SINE MIR 101 256 -6 352 331 44 6 chr10 62746515 62746696 -82842592 - MER117 DNA MER1_type -9 188 1 298 329 6 47 chr10 62746913 62747083 -82842205 - MIR SINE MIR -73 189 27 673 335 61 45 chr10 62747693 62748002 -82841286 + L1MC/D LINE L1 4297 4599 -1547 2028 141 0 7 chr10 62748002 62748300 -82840988 - AluSx SINE Alu -11 301 6 673 335 61 45 chr10 62748300 62748595 -82840693 + L1MC/D LINE L1 4599 4911 -1235 352 0 42 0 chr10 62748654 62748702 -82840586 + (TG)n Simple_repeat Simple_repeat 2 51 0 189 0 0 0 chr10 62748707 62748728 -82840560 + (GA)n Simple_repeat Simple_repeat 1 21 0 949 201 67 14 chr10 62748750 62748959 -82840329 - AluJo SINE Alu -92 220 1 1231 280 57 18 chr10 62749162 62749669 -82839619 + L1MC/D LINE L1 5290 5816 -1992 556 263 6 29 chr10 62750354 62750529 -82838759 - MER5B DNA MER1_type -4 174 4 260 336 88 18 chr10 62750757 62750870 -82838418 + MER5A DNA MER1_type 62 182 -7 540 206 55 48 chr10 62751117 62751245 -82838043 - MLT1C LTR MaLR -294 173 42 3565 143 132 11 chr10 62751245 62751876 -82837412 - MER39 LTR ERV1 0 707 1 540 206 55 48 chr10 62751876 62751912 -82837376 - MLT1C LTR MaLR -425 42 8 222 37 0 0 chr10 62753572 62753599 -82835689 + (TG)n Simple_repeat Simple_repeat 2 28 0 1729 160 176 30 chr10 62753660 62754029 -82835259 + MSTA LTR MaLR 1 423 -5 9457 140 26 35 chr10 62754053 62755639 -82833649 + MSTA-int LTR MaLR 9 1580 0 1770 143 188 53 chr10 62755639 62755970 -82833318 + MSTA LTR MaLR 1 390 -38 2420 61 7 0 chr10 62755970 62756265 -82833023 - AluY SINE Alu -14 297 1 1770 143 188 53 chr10 62756265 62756310 -82832978 + MSTA LTR MaLR 390 428 0 481 290 95 36 chr10 62756970 62757191 -82832097 + MIR SINE MIR 19 252 -10 232 242 16 16 chr10 62757272 62757334 -82831954 - MIR SINE MIR -115 93 32 249 286 20 31 chr10 62759234 62759332 -82829956 + L2 LINE L2 3180 3276 -37 367 323 44 19 chr10 62759396 62759554 -82829734 - MIR SINE MIR -73 189 28 557 265 25 14 chr10 62759554 62759713 -82829575 - MER58A DNA MER1_type 0 158 12 223 298 135 10 chr10 62759829 62759933 -82829355 - MIR3 SINE MIR -54 154 38 1162 95 16 42 chr10 62760938 62761127 -82828161 + L1MB2 LINE L1 5987 6170 -1 291 261 171 11 chr10 62761141 62761317 -82827971 + MIR SINE MIR 52 255 -7 491 183 200 17 chr10 62761669 62761789 -82827499 - MER5A DNA MER1_type 0 189 48 22 35 0 0 chr10 62762589 62762618 -82826670 + AT_rich Low_complexity Low_complexity 1 29 0 2532 77 0 13 chr10 62763268 62763581 -82825707 + AluSc SINE Alu 1 309 0 324 262 84 9 chr10 62764560 62764667 -82824621 - MIR3 SINE MIR -15 193 79 1141 238 47 59 chr10 62764719 62765059 -82824229 + MLT1H LTR MaLR 1 336 -213 254 116 58 43 chr10 62765139 62765208 -82824080 + MLT1H LTR MaLR 505 574 -16 807 264 54 0 chr10 62765527 62765694 -82823594 - MER45A DNA AcHobo 0 178 3 2142 106 0 3 chr10 62767197 62767480 -82821808 + AluSc SINE Alu 1 282 -27 1071 162 0 6 chr10 62769393 62769560 -82819728 - FRAM SINE Alu -11 165 1 212 122 82 0 chr10 62769724 62769773 -82819515 + T-rich Low_complexity Low_complexity 3 55 0 460 311 91 18 chr10 62769964 62770183 -82819105 - MIR SINE MIR 0 262 28 1943 136 7 0 chr10 62770185 62770493 -82818795 - AluSx SINE Alu 0 310 1 204 40 0 0 chr10 62771894 62771919 -82817369 + (CA)n Simple_repeat Simple_repeat 2 26 0 280 239 15 15 chr10 62772294 62772361 -82816927 + MLT1K LTR MaLR 26 92 -496 * 847 278 93 24 chr10 62772357 62772691 -82816597 + MLT1K LTR MaLR 226 582 -6 2084 130 10 0 chr10 62772691 62772992 -82816296 + AluSx SINE Alu 1 304 -8 185 171 57 0 chr10 62774185 62774220 -82815068 - L2 LINE L2 -14 3299 3263 * 255 260 146 0 chr10 62774191 62774287 -82815001 - MIR SINE MIR -16 246 137 225 214 0 0 chr10 62774290 62774332 -82814956 + T-rich Low_complexity Low_complexity 1 42 0 1024 194 12 0 chr10 62774333 62774503 -82814785 - FAM SINE Alu -3 172 1 219 328 15 0 chr10 62774507 62774574 -82814714 - MIR SINE MIR -63 145 78 182 361 41 57 chr10 62774912 62775106 -82814182 + L2 LINE L2 2854 3044 -228 392 338 63 0 chr10 62775245 62775387 -82813901 + L2 LINE L2 3116 3266 -6 407 215 37 126 chr10 62775630 62775844 -82813444 + MER112 DNA MER1_type 35 229 -31 550 271 164 0 chr10 62775866 62776073 -82813215 + MIR SINE MIR 20 260 -2 496 310 32 19 chr10 62776118 62776276 -82813012 - MIR SINE MIR -78 184 25 2237 121 3 0 chr10 62776277 62776584 -82812704 - AluSx SINE Alu -4 308 1 397 291 60 33 chr10 62776714 62776896 -82812392 + MIR SINE MIR 14 200 -62 213 288 51 0 chr10 62778064 62778123 -82811165 + MIR3 SINE MIR 8 69 -139 281 344 46 8 chr10 62778492 62778623 -82810665 - MIR SINE MIR -66 196 61 597 94 0 12 chr10 62778645 62778730 -82810558 - LTR23 LTR ERV1 -34 403 320 2157 93 0 0 chr10 62779154 62779462 -82809826 + AluSx SINE Alu 15 322 0 379 254 90 30 chr10 62779471 62779605 -82809683 + L1ME3 LINE L1 6021 6162 0 1275 318 35 28 chr10 62780429 62780970 -82808318 - MLT1K LTR MaLR -31 557 13 183 80 0 0 chr10 62781372 62781397 -82807891 + (T)n Simple_repeat Simple_repeat 1 25 0 207 176 0 0 chr10 62781403 62781437 -82807851 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 1504 143 0 5 chr10 62781767 62781990 -82807298 - MLT1D LTR MaLR 0 505 284 6746 75 10 7 chr10 62782015 62782910 -82806378 - L1MA1 LINE L1 -5 6297 5400 311 208 167 14 chr10 62782980 62783052 -82806236 + MIR SINE MIR 26 108 -154 581 309 106 9 chr10 62783115 62783332 -82805956 - MIR SINE MIR -21 241 4 22 0 0 0 chr10 62784091 62784113 -82805175 + AT_rich Low_complexity Low_complexity 1 22 0 339 267 158 17 chr10 62785235 62785355 -82803933 - MIR SINE MIR -122 140 4 258 242 15 0 chr10 62786342 62786408 -82802880 + (TA)n Simple_repeat Simple_repeat 1 67 0 206 214 0 0 chr10 62786442 62786484 -82802804 + (CA)n Simple_repeat Simple_repeat 1 42 0 333 246 112 35 chr10 62787630 62787825 -82801463 - MIR SINE MIR -41 221 4 2643 202 24 2 chr10 62789859 62790394 -82798894 + L1MB4 LINE L1 5628 6174 -6 338 262 48 63 chr10 62790575 62790674 -82798614 - MIR SINE MIR -12 250 152 4368 129 34 79 chr10 62790674 62791496 -82797792 + LTR1 LTR ERV1 1 785 0 338 262 48 63 chr10 62791496 62791522 -82797766 - MIR SINE MIR -110 152 127 1557 188 51 0 chr10 62791606 62791778 -82797510 - AluJb SINE Alu -4 308 113 369 0 0 0 chr10 62791778 62791819 -82797469 + (TTG)n Simple_repeat Simple_repeat 2 42 0 1557 188 51 0 chr10 62791819 62791939 -82797349 - AluJb SINE Alu -199 113 1 283 268 30 35 chr10 62791987 62792087 -82797201 + MER5B DNA MER1_type 64 152 -26 4382 192 34 9 chr10 62792090 62793507 -82795781 + L1MB7 LINE L1 4730 6184 0 286 242 10 40 chr10 62793620 62793719 -82795569 - MIR SINE MIR -30 232 137 6459 53 1 0 chr10 62793917 62794666 -82794622 - L1PA5 LINE L1 -1 6153 5404 284 306 124 16 chr10 62794892 62795013 -82794275 + L2 LINE L2 3138 3271 -1 219 363 222 20 chr10 62795061 62795791 -82793497 - L2 LINE L2 -404 2910 2034 229 255 21 0 chr10 62795860 62795907 -82793381 - MLT1K LTR MaLR -16 572 525 285 172 0 62 chr10 62796161 62796225 -82793063 - MLT1K LTR MaLR -346 242 183 255 371 32 0 chr10 62797191 62797315 -82791973 + MIR SINE MIR 7 134 -128 3983 146 45 64 chr10 62797381 62797711 -82791577 + MER6 DNA MER2_type 66 401 -464 207 100 0 0 chr10 62797711 62797741 -82791547 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 3983 146 45 64 chr10 62797741 62798186 -82791102 + MER6 DNA MER2_type 401 826 -39 232 222 0 0 chr10 62799054 62799099 -82790189 + L2 LINE L2 3266 3310 -3 210 254 32 32 chr10 62799244 62799307 -82789981 + MIR SINE MIR 91 153 -55 355 331 153 6 chr10 62799659 62799822 -82789466 + MIR3 SINE MIR 16 202 -6 467 298 30 0 chr10 62799970 62800101 -82789187 - MIR SINE MIR -18 244 110 775 136 0 8 chr10 62800622 62800740 -82788548 - FLAM_C SINE Alu -16 117 1 486 280 136 81 chr10 62800897 62801836 -82787452 + L1M2 LINE L1 383 1442 -5407 1421 180 53 35 chr10 62802117 62802401 -82786887 + AluJo SINE Alu 10 298 -14 1811 168 0 10 chr10 62802450 62802753 -82786535 - AluJb SINE Alu -12 300 1 432 74 0 0 chr10 62803261 62803360 -82785928 + L1PA10 LINE L1 6093 6191 0 1338 189 12 4 chr10 62804409 62804653 -82784635 + AluSx SINE Alu 59 304 -8 366 362 7 13 chr10 62804784 62804936 -82784352 + MIR SINE MIR 5 155 -107 940 269 52 26 chr10 62804936 62805319 -82783969 + LTR40c LTR ERVL 1 393 -72 271 297 67 0 chr10 62805829 62805943 -82783345 + MIR SINE MIR 76 206 -56 374 339 26 0 chr10 62807241 62807356 -82781932 - L2 LINE L2 -17 3255 3138 912 137 0 29 chr10 62807389 62807528 -82781760 + FLAM_C SINE Alu 1 135 -8 4172 132 25 25 chr10 62807989 62808624 -82780664 + MER41B LTR ERV1 1 635 0 979 255 28 25 chr10 62808916 62809269 -82780019 - MER57A LTR ERV1 -48 355 2 4044 74 4 0 chr10 62809398 62809896 -82779392 + SVA Other Other 870 1369 -17 206 81 27 0 chr10 62809901 62809938 -82779350 + (TAAAA)n Simple_repeat Simple_repeat 2 39 0 810 107 9 0 chr10 62810538 62810650 -82778638 - L1PA10 LINE L1 -26 6142 6030 1607 221 30 0 chr10 62810841 62811171 -82778117 - MER58B DNA MER1_type -1 340 1 8962 99 16 5 chr10 62811635 62812892 -82776396 + Harlequin LTR ERV1 3538 4808 -2088 916 197 46 105 chr10 62813195 62813566 -82775722 - MLT1A2 LTR MaLR -35 355 1 306 271 36 68 chr10 62814310 62814531 -82774757 + MER58A DNA MER1_type 11 224 0 30 27 0 0 chr10 62814608 62814645 -82774643 + AT_rich Low_complexity Low_complexity 1 37 0 879 175 12 29 chr10 62814811 62814982 -82774306 - AluJo SINE Alu -115 197 30 2927 246 116 12 chr10 62814982 62815873 -82773415 - L2 LINE L2 -559 2755 1773 327 271 113 45 chr10 62816520 62816653 -82772635 - MIR3 SINE MIR -28 180 39 341 278 98 30 chr10 62816883 62817042 -82772246 + MIR SINE MIR 4 171 -58 5882 109 14 1 chr10 62817184 62818056 -82771232 - L1P LINE L1 -2905 3241 2359 21 0 0 0 chr10 62819063 62819084 -82770204 + AT_rich Low_complexity Low_complexity 1 21 0 776 235 148 39 chr10 62819190 62819501 -82769787 - LTR16A LTR ERVL -9 441 97 1917 106 18 28 chr10 62820376 62820699 -82768589 + AluSx SINE Alu 1 320 0 730 153 46 108 chr10 62820715 62820887 -82768401 - L1MC3 LINE L1 -21 7764 7618 1990 142 37 0 chr10 62820887 62821182 -82768106 + AluJo SINE Alu 6 311 -1 730 153 46 108 chr10 62821182 62821316 -82767972 - L1MC3 LINE L1 -167 7618 7477 221 259 19 0 chr10 62822137 62822191 -82767097 - MIR3 SINE MIR -46 162 108 288 239 204 11 chr10 62823125 62823213 -82766075 + MIR SINE MIR 6 110 -152 22 35 0 0 chr10 62823274 62823303 -82765985 + AT_rich Low_complexity Low_complexity 1 29 0 339 318 98 24 chr10 62823526 62823781 -82765507 + LTR33 LTR ERVL 1 274 -247 932 265 110 26 chr10 62823828 62824247 -82765041 - LTR16A LTR ERVL 0 457 4 271 234 43 21 chr10 62824294 62824388 -82764900 + LTR33 LTR ERVL 423 518 -3 372 43 0 0 chr10 62824388 62824434 -82764854 + (CA)n Simple_repeat Simple_repeat 2 47 0 405 286 92 10 chr10 62824436 62824632 -82764656 - L1MC4a LINE L1 -1929 5879 5668 1464 195 0 0 chr10 62824668 62824929 -82764359 - AluJb SINE Alu -3 309 49 458 174 64 9 chr10 62825039 62825148 -82764140 - LTR2B LTR ERV1 -26 464 350 * 772 236 27 73 chr10 62825144 62825403 -82763885 - LTR2 LTR ERV1 -202 247 1 7933 66 3 0 chr10 62825403 62826382 -82762906 - Harlequin LTR ERV1 0 6896 5915 2055 111 0 37 chr10 62827003 62827300 -82761988 + AluSx SINE Alu 1 286 -26 245 295 62 45 chr10 62828743 62828855 -82760433 + L2 LINE L2 3199 3312 -1 231 213 187 13 chr10 62829022 62829097 -82760191 + L2 LINE L2 3180 3267 -5 278 271 0 0 chr10 62829241 62829300 -82759988 - MIR3 SINE MIR -6 202 144 38803 86 5 5 chr10 62830351 62836492 -82752796 - L1PA6 LINE L1 0 6154 11 393 318 80 58 chr10 62837324 62837651 -82751637 - L3b LINE CR1 -148 1435 1102 419 222 259 24 chr10 62837732 62837944 -82751344 - MIR SINE MIR 0 262 1 397 218 208 0 chr10 62838933 62839034 -82750254 + MER94 DNA DNA 12 133 -1 331 363 12 23 chr10 62839607 62839778 -82749510 - MLT1J2 LTR MaLR -9 441 273 664 261 30 0 chr10 62839779 62839944 -82749344 - MLT1J2 LTR MaLR -280 170 1 296 220 0 0 chr10 62840108 62840167 -82749121 + MIR SINE MIR 84 142 -66 10911 193 41 40 chr10 62840323 62841146 -82748142 - L1PA16 LINE L1 -1 6165 5344 2218 128 0 0 chr10 62841146 62841443 -82747845 - AluSc SINE Alu -12 297 1 10911 193 41 40 chr10 62841443 62843570 -82745718 - L1PA16 LINE L1 -822 5344 3196 6383 43 0 0 chr10 62843570 62844290 -82744998 - L1PA5 LINE L1 -6 6148 5429 10911 193 41 40 chr10 62844290 62845145 -82744143 - L1PA16 LINE L1 -2970 3196 2343 486 220 68 0 chr10 62845174 62845292 -82743996 + MER109 Unknown Unknown 456 581 -1851 2855 97 14 8 chr10 62846113 62846475 -82742813 - THE1B LTR MaLR 0 364 1 2480 236 65 32 chr10 62846486 62847244 -82742044 - L1ME3A LINE L1 -6 6164 5382 308 333 99 56 chr10 62847244 62847728 -82741560 + L2 LINE L2 2399 2903 -411 370 336 98 12 chr10 62847983 62848227 -82741061 + L1M4 LINE L1 4891 5155 -991 3676 122 17 28 chr10 62848695 62849228 -82740060 + MER1A DNA MER1_type 1 527 0 468 35 0 0 chr10 62851224 62851282 -82738006 + (TC)n Simple_repeat Simple_repeat 1 58 0 195 287 129 20 chr10 62851722 62851823 -82737465 + L2 LINE L2 3161 3272 0 368 335 32 27 chr10 62852801 62852986 -82736302 + MER5A DNA MER1_type 2 187 -2 22 0 0 0 chr10 62853000 62853022 -82736266 + AT_rich Low_complexity Low_complexity 1 22 0 225 296 37 12 chr10 62853901 62853982 -82735306 + MIR SINE MIR 19 101 -107 239 331 83 28 chr10 62854137 62854282 -82735006 - MER5B DNA MER1_type -17 161 9 396 0 0 0 chr10 62854707 62854751 -82734537 + (CA)n Simple_repeat Simple_repeat 2 45 0 495 291 103 0 chr10 62854795 62854970 -82734318 + LTR33A LTR ERVL 1 193 -330 2446 196 30 19 chr10 62855200 62855740 -82733548 + L1MB8 LINE L1 5631 6176 -2 4236 135 23 9 chr10 62855930 62856574 -82732714 + MER39B LTR ERV1 1 653 0 2126 132 3 13 chr10 62858383 62858693 -82730595 + AluSx SINE Alu 1 307 -5 1801 117 6 29 chr10 62858707 62859026 -82730262 + THE1B LTR MaLR 1 364 0 238 273 172 10 chr10 62860512 62860611 -82728677 + MER5A DNA MER1_type 47 161 -28 457 291 55 0 chr10 62861245 62861372 -82727916 - MIR3 SINE MIR -9 199 66 493 306 120 60 chr10 62862234 62862707 -82726581 + L2 LINE L2 2347 2881 -391 2483 202 15 93 chr10 62862707 62863238 -82726050 - MLT2B3 LTR ERVL 0 554 74 468 0 0 0 chr10 62863238 62863290 -82725998 + (TG)n Simple_repeat Simple_repeat 2 53 0 2483 202 15 93 chr10 62863290 62863358 -82725930 - MLT2B3 LTR ERVL -480 74 2 493 306 120 60 chr10 62863358 62863544 -82725744 + L2 LINE L2 2881 3055 -217 1923 189 46 22 chr10 62863592 62864046 -82725242 + MLT1C LTR MaLR 3 467 0 189 239 0 0 chr10 62864165 62864211 -82725077 + L2 LINE L2 3262 3307 -6 195 333 25 25 chr10 62864313 62864394 -82724894 + L2 LINE L2 3145 3225 -47 368 290 84 8 chr10 62864606 62864737 -82724551 + MLT1I LTR MaLR 269 409 0 1420 280 58 2 chr10 62865591 62866002 -82723286 + L2 LINE L2 1239 1672 -1642 2051 207 15 24 chr10 62866003 62866462 -82722826 - LTR40b LTR ERVL 0 462 8 3095 266 67 69 chr10 62866520 62867853 -82721435 + L2 LINE L2 1806 3134 -179 2659 214 76 19 chr10 62867853 62868471 -82720817 + MER82 DNA MER2_type 1 653 0 3095 266 67 69 chr10 62868471 62868651 -82720637 + L2 LINE L2 3134 3313 0 300 321 75 0 chr10 62869033 62869139 -82720149 + L2 LINE L2 3147 3260 -12 394 313 72 12 chr10 62869692 62869858 -82719430 - MER5A DNA MER1_type -1 188 13 2073 125 0 0 chr10 62870019 62870355 -82718933 + AluSg SINE Alu 1 336 0 213 317 42 42 chr10 62870357 62870477 -82718811 + MER5B DNA MER1_type 59 178 0 223 308 0 55 chr10 62871161 62871252 -82718036 + MIR SINE MIR 164 249 -13 184 278 37 83 chr10 62871784 62871892 -82717396 + MER5A DNA MER1_type 42 144 -45 408 330 62 5 chr10 62872838 62873032 -82716256 - MIR SINE MIR -45 217 13 226 316 97 19 chr10 62873837 62873992 -82715296 + L2 LINE L2 2869 3035 -237 820 222 16 16 chr10 62874638 62874827 -82714461 + MER5A DNA MER1_type 1 189 0 211 315 141 11 chr10 62874830 62874922 -82714366 + MIR SINE MIR 19 122 -140 484 310 94 41 chr10 62875060 62875402 -82713886 + LTR16C LTR ERVL 132 491 0 22 0 0 0 chr10 62875416 62875438 -82713850 + AT_rich Low_complexity Low_complexity 1 22 0 219 277 24 0 chr10 62876618 62876701 -82712587 + (TAA)n Simple_repeat Simple_repeat 2 86 0 400 292 76 0 chr10 62876717 62876861 -82712427 - MIR SINE MIR -21 241 87 278 365 0 0 chr10 62876985 62877070 -82712218 + L2 LINE L2 3228 3312 -1 222 105 0 0 chr10 62877220 62877258 -82712030 + (TA)n Simple_repeat Simple_repeat 1 38 0 26 0 0 0 chr10 62878280 62878306 -82710982 + AT_rich Low_complexity Low_complexity 1 26 0 272 255 108 70 chr10 62878925 62879082 -82710206 - MER5A DNA MER1_type -7 182 20 186 156 0 0 chr10 62879328 62879360 -82709928 - MIR3 SINE MIR -7 201 170 197 365 67 10 chr10 62879514 62879618 -82709670 + L2 LINE L2 3162 3271 -1 657 316 130 17 chr10 62879741 62880086 -82709202 + MLT1J2 LTR MaLR 43 426 -24 453 217 123 0 chr10 62880385 62880491 -82708797 + MER45A DNA AcHobo 60 178 0 180 0 0 0 chr10 62881131 62881151 -82708137 + (TTG)n Simple_repeat Simple_repeat 2 21 0 247 154 0 77 chr10 62881804 62881856 -82707432 + MER63 DNA MER1_type 17 690 -146 302 354 101 41 chr10 62881882 62882282 -82707006 + L2 LINE L2 2628 3062 -210 1136 270 99 48 chr10 62882345 62882841 -82706447 - LTR33 LTR ERVL 0 521 1 346 287 155 8 chr10 62882925 62883054 -82706234 - MIR SINE MIR -113 149 2 296 316 43 36 chr10 62883069 62883208 -82706080 + L2 LINE L2 3173 3312 -1 258 213 80 0 chr10 62884339 62884414 -82704874 + Charlie8 DNA MER1_type 1346 1426 -991 386 342 49 1 chr10 62885750 62885899 -82703389 + MIR SINE MIR 38 191 -62 510 294 44 0 chr10 62886334 62886470 -82702818 - MIR SINE MIR -15 247 106 249 200 20 0 chr10 62886505 62886555 -82702733 - L2 LINE L2 -665 2649 2599 961 159 70 61 chr10 62887264 62887478 -82701810 - MER20 DNA MER1_type 0 219 4 268 244 160 38 chr10 62887894 62888025 -82701263 - L2 LINE L2 -3 3310 3164 1684 119 122 32 chr10 62888272 62888616 -82700672 + THE1C LTR MaLR 1 375 0 680 369 40 3 chr10 62888983 62889454 -82699834 - HERVL LTR ERVL -804 4850 4397 529 200 105 42 chr10 62889469 62889659 -82699629 + L1M4 LINE L1 4099 4300 -1846 26 50 0 0 chr10 62890095 62890135 -82699153 + AT_rich Low_complexity Low_complexity 1 40 0 2119 117 33 43 chr10 62890380 62890748 -82698540 + THE1B LTR MaLR 1 364 0 549 269 10 62 chr10 62890948 62891156 -82698132 - MIR SINE MIR -63 199 3 201 325 24 36 chr10 62891636 62891719 -82697569 + MIR3 SINE MIR 1 82 -126 225 0 0 0 chr10 62892644 62892669 -82696619 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 2210 120 3 0 chr10 62892978 62893278 -82696010 + AluSx SINE Alu 1 301 -11 658 249 127 5 chr10 62893358 62893555 -82695733 - MIR SINE MIR -25 237 17 293 337 0 11 chr10 62893555 62893647 -82695641 + MER58A DNA MER1_type 1 91 -16 522 225 17 17 chr10 62893948 62894068 -82695220 - MER39 LTR ERV1 0 707 588 616 95 0 0 chr10 62894070 62894154 -82695134 + AluY SINE Alu 212 295 -16 1065 224 85 22 chr10 62894154 62894512 -82694776 - MER39 LTR ERV1 -115 592 4 1259 177 58 63 chr10 62894867 62895263 -82694025 + LTR37A LTR ERV1 32 425 -1 329 310 272 5 chr10 62895265 62895449 -82693839 + MIR SINE MIR 22 254 -8 2358 47 0 0 chr10 62895495 62895772 -82693516 + AluY SINE Alu 2 278 -33 185 0 40 0 chr10 62895776 62895801 -82693487 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 249 278 60 45 chr10 62896645 62896778 -82692510 - MER103 DNA DNA -12 154 20 211 192 39 19 chr10 62896954 62897006 -82692282 - MER5B DNA MER1_type -120 58 6 217 336 127 9 chr10 62897012 62897122 -82692166 + L2 LINE L2 3150 3272 0 687 0 48 10 chr10 62897197 62897301 -82691987 + (TAGA)n Simple_repeat Simple_repeat 4 111 0 769 327 23 29 chr10 62897711 62897969 -82691319 + MIR SINE MIR 8 262 0 201 167 0 48 chr10 62898476 62898518 -82690770 + L2 LINE L2 1749 1788 -1526 403 333 6 39 chr10 62898536 62898692 -82690596 + MER5B DNA MER1_type 26 176 -2 224 247 169 13 chr10 62899175 62899252 -82690036 - MIR SINE MIR -74 188 100 401 249 85 62 chr10 62900440 62900904 -82688384 + HAL1 LINE L1 1871 2507 0 309 51 0 0 chr10 62901549 62901588 -82687700 + (TG)n Simple_repeat Simple_repeat 2 40 0 398 263 230 0 chr10 62901850 62902002 -82687286 - MIR SINE MIR -6 256 70 358 284 135 14 chr10 62902073 62902214 -82687074 + MER5A DNA MER1_type 29 186 -3 194 381 135 0 chr10 62903217 62903343 -82685945 + MIR3 SINE MIR 36 178 -30 1863 248 5 35 chr10 62903735 62904421 -82684867 - L1ME1 LINE L1 -4 6227 5595 2170 228 51 13 chr10 62904423 62905095 -82684193 - L1ME1 LINE L1 -3873 2523 1827 4831 258 45 31 chr10 62905100 62906360 -82682928 - L1ME1 LINE L1 -4617 1779 486 2060 220 20 7 chr10 62906360 62906815 -82682473 - MER65C LTR ERV1 0 461 1 4831 258 45 31 chr10 62906815 62907275 -82682013 - L1ME1 LINE L1 -5910 486 34 203 269 19 0 chr10 62908266 62908318 -82680970 - MIR3 SINE MIR -1 207 155 370 318 78 6 chr10 62908320 62908499 -82680789 - MER117 DNA MER1_type 0 197 6 194 277 43 0 chr10 62908500 62908547 -82680741 - MIR3 SINE MIR -42 166 118 208 298 149 35 chr10 62909175 62909289 -82679999 - MIR3 SINE MIR -78 130 4 288 328 42 19 chr10 62909376 62909582 -82679706 - MIR SINE MIR -22 240 33 34 24 0 0 chr10 62909856 62909897 -82679391 + AT_rich Low_complexity Low_complexity 1 41 0 182 61 0 30 chr10 62910277 62910310 -82678978 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 4172 131 65 24 chr10 62910312 62910412 -82678876 - L1MA8 LINE L1 -3 6288 6194 2160 118 3 7 chr10 62910412 62910709 -82678579 - AluSx SINE Alu -16 296 1 4172 131 65 24 chr10 62910709 62911411 -82677877 - L1MA8 LINE L1 -97 6194 5453 539 170 20 11 chr10 62911426 62911539 -82677749 + L1MA7 LINE L1 4843 4955 -1191 726 133 3 4 chr10 62911682 62911811 -82677477 + L1MA7 LINE L1 5776 5903 -263 3643 158 46 1 chr10 62911814 62912544 -82676744 - L1M2 LINE L1 -743 5403 4688 1537 112 0 0 chr10 62912901 62913106 -82676182 + AluSg SINE Alu 1 205 -105 418 273 97 7 chr10 62913463 62913978 -82675310 - L1ME3A LINE L1 -289 5864 5238 381 330 111 11 chr10 62914036 62914297 -82674991 - L1ME3A LINE L1 -996 5133 4847 275 315 0 0 chr10 62914309 62914401 -82674887 - L1ME3A LINE L1 -1314 4815 4724 1059 226 0 5 chr10 62914413 62914630 -82674658 - LTR16A LTR ERVL -5 445 230 2099 0 0 0 chr10 62914803 62915030 -82674258 - AluYa5 SINE Alu 0 311 85 282 278 0 14 chr10 62915033 62915105 -82674183 - LTR16A LTR ERVL -328 122 52 590 282 58 39 chr10 62915167 62915649 -82673639 - L1ME3A LINE L1 -1433 4696 4206 292 286 86 9 chr10 62915658 62915763 -82673525 - L1ME3A LINE L1 -1974 4155 4043 532 226 91 65 chr10 62915835 62916021 -82673267 - MIR SINE MIR -41 221 31 357 239 88 98 chr10 62916221 62916506 -82672782 - L1ME3A LINE L1 -5779 340 59 308 226 21 21 chr10 62917415 62917508 -82671780 + L1MC4 LINE L1 6610 6702 -1340 2453 218 19 58 chr10 62917520 62918262 -82671026 - L1ME1 LINE L1 -15 6151 5439 384 169 28 0 chr10 62918259 62918330 -82670958 + L1ME LINE L1 5360 5432 -734 * 739 344 128 23 chr10 62921321 62921979 -82667309 - L2 LINE L2 -459 2855 2129 192 111 0 0 chr10 62922023 62922059 -82667229 + (T)n Simple_repeat Simple_repeat 1 36 0 462 232 143 24 chr10 62923775 62923943 -82665345 + MIR SINE MIR 61 248 -14 1298 173 15 15 chr10 62925633 62925899 -82663389 + L1MD3 LINE L1 7730 7995 0 24 0 0 0 chr10 62927134 62927158 -82662130 + AT_rich Low_complexity Low_complexity 1 24 0 256 169 197 28 chr10 62927331 62927402 -82661886 - MLT1A2 LTR MaLR 0 374 292 396 0 0 0 chr10 62927769 62927813 -82661475 + (TG)n Simple_repeat Simple_repeat 2 45 0 2324 144 10 10 chr10 62927905 62928294 -82660994 + LTR45B LTR ERV1 3 391 -98 250 333 22 58 chr10 62928488 62928626 -82660662 + MIR3 SINE MIR 64 196 -12 290 343 57 5 chr10 62930998 62931143 -82658145 - MIR SINE MIR -54 154 19 390 306 65 29 chr10 62933842 62934012 -82655276 + MLT1J LTR MaLR 329 504 -7 467 266 23 16 chr10 62934097 62934225 -82655063 + L1ME LINE L1 332 460 -5745 1811 247 132 20 chr10 62934264 62935606 -82653682 + L1ME LINE L1 1431 2895 -3320 23 33 0 0 chr10 62935723 62935753 -82653535 + AT_rich Low_complexity Low_complexity 1 30 0 365 325 17 8 chr10 62936773 62936890 -82652398 + L2 LINE L2 3179 3296 -17 847 246 125 86 chr10 62937823 62938381 -82650907 - MLT1H1 LTR MaLR -19 536 1 343 351 73 0 chr10 62938446 62938597 -82650691 - L3 LINE CR1 -28 1549 1388 549 270 44 82 chr10 62938605 62938920 -82650368 - L1MC5 LINE L1 -386 7575 7273 273 338 19 7 chr10 62938892 62939046 -82650242 - L1MC4 LINE L1 -568 7474 7319 * 1436 240 62 60 chr10 62939072 62939735 -82649553 - L1MC5 LINE L1 -755 7206 6536 2462 178 65 23 chr10 62940155 62940677 -82648611 - L1MB8 LINE L1 -6 6172 5629 468 325 110 13 chr10 62941054 62941291 -82647997 + MIR SINE MIR 3 262 0 613 206 7 20 chr10 62942151 62942297 -82646991 - L1MA10 LINE L1 -11 6323 6180 2350 222 48 12 chr10 62942334 62943381 -82645907 - L1ME1 LINE L1 -165 6001 4880 822 218 17 17 chr10 62944086 62944260 -82645028 - MIR SINE MIR -87 175 2 1984 183 42 23 chr10 62944777 62945204 -82644084 + MER63B DNA MER1_type 1 435 -1 867 286 36 4 chr10 62945540 62945792 -82643496 + MIR SINE MIR 3 262 0 219 36 0 0 chr10 62945931 62945959 -82643329 + (TG)n Simple_repeat Simple_repeat 1 28 0 364 248 64 18 chr10 62946017 62946126 -82643162 - MIR SINE MIR -59 149 36 981 171 52 38 chr10 62946322 62946533 -82642755 - MLT1C LTR MaLR -252 215 2 21 82 0 0 chr10 62946799 62946848 -82642440 + AT_rich Low_complexity Low_complexity 1 49 0 268 140 18 18 chr10 62946945 62947002 -82642286 - L1ME4a LINE L1 -5 6116 6060 1478 229 39 45 chr10 62947594 62947852 -82641436 - LTR40c LTR ERVL -4 461 205 2183 92 0 0 chr10 62947852 62948169 -82641119 - AluSg SINE Alu 0 317 1 1478 229 39 45 chr10 62948169 62948372 -82640916 - LTR40c LTR ERVL -260 205 2 191 345 35 0 chr10 62948521 62948579 -82640709 - L2 LINE L2 -3 3269 3210 324 220 17 0 chr10 62949987 62950046 -82639242 - MIR SINE MIR -187 75 16 198 0 0 0 chr10 62950050 62950072 -82639216 + (TA)n Simple_repeat Simple_repeat 1 22 0 * 201 39 0 0 chr10 62950071 62950097 -82639191 + (GA)n Simple_repeat Simple_repeat 2 27 0 211 155 60 0 chr10 62950101 62950185 -82639103 + (TA)n Simple_repeat Simple_repeat 1 89 0 467 295 104 6 chr10 62950233 62950406 -82638882 - MIR SINE MIR -56 206 17 446 296 141 79 chr10 62950479 62950996 -82638292 - MLT1H LTR MaLR 0 549 1 225 224 0 20 chr10 62951054 62951103 -82638185 - MER63 DNA MER1_type -36 1024 977 472 163 0 12 chr10 62951103 62951183 -82638105 - MER63 DNA MER1_type -84 752 674 716 217 177 5 chr10 62952136 62952334 -82636954 + MIR SINE MIR 31 262 0 24 53 0 0 chr10 62952895 62952933 -82636355 + AT_rich Low_complexity Low_complexity 1 38 0 1081 175 34 0 chr10 62953081 62953258 -82636030 + FAM SINE Alu 1 47 -2 28 29 0 0 chr10 62953636 62953671 -82635617 + AT_rich Low_complexity Low_complexity 1 35 0 22 56 0 0 chr10 62953728 62953764 -82635524 + AT_rich Low_complexity Low_complexity 1 36 0 4271 183 44 13 chr10 62955122 62956405 -82632883 - L1PB4 LINE L1 -4 6152 4834 265 304 0 0 chr10 62957940 62958009 -82631279 + L3 LINE CR1 1043 1111 -466 255 114 0 0 chr10 62958011 62958055 -82631233 + (TA)n Simple_repeat Simple_repeat 2 45 0 272 349 151 4 chr10 62958055 62958287 -82631001 + L3 LINE CR1 1256 1521 -56 1003 160 38 37 chr10 62958432 62958722 -82630566 + MER2 DNA MER2_type 4 345 0 186 167 0 0 chr10 62958966 62959002 -82630286 + (CATA)n Simple_repeat Simple_repeat 1 36 0 24 0 0 0 chr10 62961660 62961684 -82627604 + AT_rich Low_complexity Low_complexity 1 24 0 7532 168 40 15 chr10 62961716 62962670 -82626618 - L1M2 LINE L1 -635 5656 4727 180 0 0 0 chr10 62962670 62962690 -82626598 + (TG)n Simple_repeat Simple_repeat 1 20 0 7532 168 40 15 chr10 62962690 62963292 -82625996 - L1M2 LINE L1 -1564 4727 4054 2295 76 0 7 chr10 62963292 62963580 -82625708 - AluY SINE Alu -15 296 11 7532 168 40 15 chr10 62963580 62963821 -82625467 - L1M2 LINE L1 -2237 4054 3820 468 359 93 33 chr10 62964521 62964822 -82624466 + L3 LINE CR1 892 1210 -367 21 0 0 0 chr10 62964965 62964986 -82624302 + AT_rich Low_complexity Low_complexity 1 21 0 3674 137 9 44 chr10 62965874 62966509 -82622779 - MER39B LTR ERV1 0 653 41 279 0 0 0 chr10 62966509 62966540 -82622748 + (T)n Simple_repeat Simple_repeat 1 31 0 231 192 77 19 chr10 62967465 62967517 -82621771 + L2 LINE L2 3245 3299 -14 207 293 152 40 chr10 62968358 62968457 -82620831 + L2 LINE L2 3204 3313 0 217 274 0 0 chr10 62969322 62969373 -82619915 + C-rich Low_complexity Low_complexity 3 53 0 44 20 0 0 chr10 62970738 62970789 -82618499 + AT_rich Low_complexity Low_complexity 1 51 0 396 0 0 0 chr10 62972422 62972466 -82616822 + (CA)n Simple_repeat Simple_repeat 2 45 0 309 235 0 82 chr10 62972829 62972927 -82616361 - L1MC4 LINE L1 -1339 6703 6614 * 343 296 20 0 chr10 62972857 62972955 -82616333 + L1MC4 LINE L1 6614 6713 -1329 428 256 195 6 chr10 62973559 62973723 -82615565 + MIR SINE MIR 2 196 -66 1977 98 0 0 chr10 62974938 62975192 -82614096 - AluSg SINE Alu -28 282 29 1087 228 9 13 chr10 62976725 62976949 -82612339 + MER58A DNA MER1_type 1 223 -1 25800 38 1 0 chr10 62977221 62977564 -82611724 - L1PA4 LINE L1 0 6155 5814 2794 16 0 0 chr10 62977564 62977869 -82611419 - AluYa5 SINE Alu -6 305 1 25800 38 1 0 chr10 62977869 62981485 -82607803 - L1PA4 LINE L1 -341 5814 2212 854 189 200 11 chr10 62981751 62982016 -82607272 - MER5C DNA MER1_type -7 317 3 21 0 0 0 chr10 62982121 62982142 -82607146 + AT_rich Low_complexity Low_complexity 1 21 0 192 355 28 9 chr10 62982344 62982451 -82606837 - L2 LINE L2 -237 3035 2927 231 259 79 43 chr10 62982762 62982901 -82606387 - Charlie1 DNA MER1_type -315 2446 2303 22 35 0 0 chr10 62984796 62984825 -82604463 + AT_rich Low_complexity Low_complexity 1 29 0 836 191 92 0 chr10 62984895 62985068 -82604220 - MER5A DNA MER1_type 0 189 1 298 292 55 89 chr10 62985297 62985588 -82603700 - L2 LINE L2 -804 2510 2230 1286 114 11 11 chr10 62986660 62986844 -82602444 - AluSg/x SINE Alu -9 303 120 1280 212 57 55 chr10 62987810 62988266 -82601022 - MER39 LTR ERV1 0 707 53 332 254 155 47 chr10 62988413 62988606 -82600682 + Charlie7 DNA MER1_type 5 218 -2394 797 225 151 38 chr10 62988634 62988995 -82600293 + Charlie7 DNA MER1_type 2143 2559 -53 2321 73 3 13 chr10 62988995 62989296 -82599992 - AluY SINE Alu -13 298 1 797 225 151 38 chr10 62989296 62989351 -82599937 + Charlie7 DNA MER1_type 2559 2606 -6 22185 46 0 0 chr10 62990633 62994178 -82595110 - L1PA5 LINE L1 0 6154 2611 552 187 58 22 chr10 62994782 62994921 -82594367 + L1PB4 LINE L1 6011 6154 -2 27 0 0 0 chr10 62994923 62994950 -82594338 + AT_rich Low_complexity Low_complexity 1 27 0 412 355 16 5 chr10 62995214 62995408 -82593880 - MIR SINE MIR 0 208 11 7165 48 1 1 chr10 62995583 62996496 -82592792 + L1PA5 LINE L1 5228 6141 -13 2090 107 38 0 chr10 62997443 62997734 -82591554 - AluSq SINE Alu -11 302 1 332 137 0 0 chr10 62998267 62998318 -82590970 - L1P3 LINE L1 -6182 279 229 10602 158 36 45 chr10 62999715 63000189 -82589099 + L1P LINE L1 12 489 -5657 2399 71 3 3 chr10 63000189 63000486 -82588802 + AluY SINE Alu 1 297 -14 10602 158 36 45 chr10 63000486 63002213 -82587075 + L1P LINE L1 489 2192 -3954 6732 59 25 1 chr10 63002213 63003649 -82585639 + L1PA7 LINE L1 4706 6152 -2 1591 182 3 35 chr10 63003666 63003950 -82585338 + AluJo SINE Alu 1 275 -37 1944 133 3 0 chr10 63003950 63004236 -82585052 - AluSp SINE Alu -7 306 20 1591 182 3 35 chr10 63004236 63004270 -82585018 + AluJo SINE Alu 275 309 -3 2635 141 21 2 chr10 63004473 63004891 -82584397 + MSTC LTR MaLR 1 426 -2 1912 154 9 95 chr10 63004909 63005350 -82583938 + MER57A LTR ERV1 1 403 0 21 0 0 0 chr10 63005612 63005633 -82583655 + AT_rich Low_complexity Low_complexity 1 21 0 193 318 15 0 chr10 63005772 63005838 -82583450 + L2 LINE L2 2661 2727 -587 28 0 0 0 chr10 63006010 63006038 -82583250 + AT_rich Low_complexity Low_complexity 1 28 0 250 224 0 149 chr10 63006608 63006715 -82582573 + L1M4 LINE L1 4886 4976 -1170 236 242 0 0 chr10 63006816 63006882 -82582406 + L1M4 LINE L1 5091 5156 -990 711 290 24 23 chr10 63007190 63007508 -82581780 + L1MC4a LINE L1 6476 6883 -1036 256 333 71 58 chr10 63008090 63008399 -82580889 - L2 LINE L2 -47 3266 2954 350 323 19 37 chr10 63008480 63008641 -82580647 - L2 LINE L2 -858 2456 2299 495 186 119 0 chr10 63008726 63008844 -82580444 - MER3 DNA MER1_type -10 199 68 502 226 51 57 chr10 63008947 63009123 -82580165 - MER39 LTR ERV1 -285 422 203 426 296 127 19 chr10 63009188 63009401 -82579887 - L2 LINE L2 -1358 1956 1721 34 42 0 0 chr10 63010227 63010275 -82579013 + AT_rich Low_complexity Low_complexity 1 48 0 683 233 61 6 chr10 63010734 63010897 -82578391 - MER69A DNA AcHobo 0 177 6 195 271 50 114 chr10 63010915 63011055 -82578233 - MIR SINE MIR -108 154 24 285 257 0 0 chr10 63011251 63011321 -82577967 - MER69A DNA AcHobo -16 161 92 387 205 268 0 chr10 63011336 63011448 -82577840 - MER69A DNA AcHobo -33 144 3 622 133 0 0 chr10 63011485 63011613 -82577675 - AluSg/x SINE Alu 0 324 197 21 0 0 0 chr10 63013048 63013069 -82576219 + AT_rich Low_complexity Low_complexity 1 21 0 232 272 54 65 chr10 63013174 63013266 -82576022 - MIR3 SINE MIR -24 184 94 690 278 53 37 chr10 63013308 63013553 -82575735 + MIR SINE MIR 4 252 -10 207 114 0 0 chr10 63013645 63013680 -82575608 + (ACTAG)n Simple_repeat Simple_repeat 3 37 0 209 189 0 0 chr10 63015878 63015915 -82573373 + (CTAGT)n Simple_repeat Simple_repeat 3 39 0 191 300 20 0 chr10 63016273 63016323 -82572965 + MIR SINE MIR 97 147 -61 1901 142 17 7 chr10 63016329 63016618 -82572670 + AluJb SINE Alu 1 292 -20 24 0 0 0 chr10 63016658 63016682 -82572606 + AT_rich Low_complexity Low_complexity 1 24 0 389 246 67 22 chr10 63017228 63017362 -82571926 + MIR SINE MIR 10 149 -113 743 137 26 0 chr10 63018606 63018812 -82570476 + AluJb SINE Alu 165 373 0 2875 3 0 0 chr10 63019444 63019755 -82569533 + AluYa5 SINE Alu 1 311 0 221 293 243 21 chr10 63021251 63021391 -82567897 + MIR3 SINE MIR 33 203 -5 1022 118 15 158 chr10 63023346 63023618 -82565670 + Tigger3(Golem) DNA MER2_type 65 297 -2732 1824 123 0 4 chr10 63023658 63023910 -82565378 - AluSx SINE Alu -28 284 34 640 203 0 17 chr10 63024008 63024126 -82565162 + FLAM_A SINE Alu 1 116 -17 276 30 0 0 chr10 63024130 63024163 -82565125 + (TAAA)n Simple_repeat Simple_repeat 3 35 0 189 274 123 19 chr10 63024659 63024765 -82564523 + L2 LINE L2 2004 2120 -1194 206 200 0 0 chr10 63024888 63024923 -82564365 + (CA)n Simple_repeat Simple_repeat 2 36 0 2367 108 11 32 chr10 63025270 63025642 -82563646 + THE1B LTR MaLR 1 364 0 233 243 149 0 chr10 63027100 63027174 -82562114 + L2 LINE L2 3225 3309 -4 254 246 154 27 chr10 63027957 63028067 -82561221 - MER76 LTR ERV -85 603 480 210 37 0 0 chr10 63028077 63028104 -82561184 + (TGG)n Simple_repeat Simple_repeat 1 27 0 228 238 48 71 chr10 63028120 63028204 -82561084 - MER76 LTR ERV -337 351 270 25 0 0 0 chr10 63028230 63028255 -82561033 + AT_rich Low_complexity Low_complexity 1 25 0 1416 203 105 42 chr10 63028709 63029117 -82560171 - MSTB2 LTR MaLR -1 456 23 311 342 46 7 chr10 63029154 63029306 -82559982 + L1 LINE L1 2392 2549 -3597 436 253 81 0 chr10 63029342 63029516 -82559772 - L1M4 LINE L1 -1016 5130 4943 253 302 48 8 chr10 63029660 63029786 -82559502 + L1ME LINE L1 5617 5747 -417 22 0 0 0 chr10 63029854 63029876 -82559412 + AT_rich Low_complexity Low_complexity 1 22 0 2932 101 14 25 chr10 63031117 63031554 -82557734 - MER57B LTR ERV1 -2 432 1 1942 163 0 3 chr10 63031790 63032090 -82557198 - AluJb SINE Alu -7 305 7 723 96 48 0 chr10 63032186 63032290 -82556998 - MER4B LTR ERV1 0 610 502 481 227 20 0 chr10 63033014 63033164 -82556124 + GA-rich Low_complexity Low_complexity 4 156 0 288 362 28 23 chr10 63033243 63033420 -82555868 - MIR3 SINE MIR -13 195 18 1222 215 119 8 chr10 63034420 63034797 -82554491 + LTR37A LTR ERV1 8 426 0 384 204 41 10 chr10 63037248 63037346 -82551942 + L1MC4 LINE L1 7767 7867 -175 357 0 0 0 chr10 63037343 63037382 -82551906 - L1PA6 LINE L1 -214 5940 5902 * 596 317 103 59 chr10 63037420 63038256 -82551032 - L1M4 LINE L1 -3143 3003 2131 2269 142 26 5 chr10 63038476 63038856 -82550432 + MER4B LTR ERV1 191 578 -32 15669 121 12 16 chr10 63039011 63041522 -82547766 - L1P LINE L1 -3003 3143 642 1362 104 14 24 chr10 63042278 63042490 -82546798 - Tigger5 DNA MER2_type 0 2323 2114 672 148 65 0 chr10 63042487 63042595 -82546693 - Tigger5 DNA MER2_type -2208 115 1 * 4800 225 86 35 chr10 63043836 63045445 -82543843 + L1MDa LINE L1 261 2091 -4449 359 227 68 0 chr10 63045442 63045530 -82543758 - L1MC3 LINE L1 -234 7551 7458 * 194 241 37 19 chr10 63045531 63045585 -82543703 - MER5B DNA MER1_type -123 55 1 377 264 176 68 chr10 63045736 63046190 -82543098 - LTR33 LTR ERVL -17 504 2 2171 88 7 23 chr10 63046255 63046563 -82542725 + AluSc SINE Alu 1 303 -6 25 75 0 0 chr10 63048101 63048154 -82541134 + AT_rich Low_complexity Low_complexity 1 53 0 33 25 0 0 chr10 63048855 63048895 -82540393 + AT_rich Low_complexity Low_complexity 1 40 0 2493 67 0 22 chr10 63051101 63051417 -82537871 + AluY SINE Alu 1 309 -2 196 264 38 0 chr10 63052726 63052779 -82536509 + MIR SINE MIR 49 103 -159 189 0 0 0 chr10 63054414 63054435 -82534853 + (TTAAA)n Simple_repeat Simple_repeat 1 21 0 228 111 0 0 chr10 63054502 63054538 -82534750 + (TAA)n Simple_repeat Simple_repeat 2 37 0 180 303 0 30 chr10 63054604 63054670 -82534618 - L2 LINE L2 -323 2990 2927 1946 103 44 7 chr10 63056563 63056880 -82532408 - AluSx SINE Alu 0 327 1 199 333 14 14 chr10 63057182 63057254 -82532034 + MIR SINE MIR 75 146 -116 225 178 0 0 chr10 63057397 63057442 -82531846 + (TCTA)n Simple_repeat Simple_repeat 3 47 0 260 278 35 43 chr10 63059789 63059904 -82529384 + MIR SINE MIR 34 147 -115 384 225 142 74 chr10 63060062 63060192 -82529096 + L1MC4a LINE L1 5811 5931 -1877 1721 176 7 13 chr10 63060192 63060493 -82528795 + AluJo SINE Alu 1 299 -13 384 225 142 74 chr10 63060493 63060673 -82528615 + L1MC4a LINE L1 5931 6142 -1666 617 320 167 42 chr10 63061771 63061828 -82527460 + L2 LINE L2 2260 2309 -1004 772 142 9 0 chr10 63061828 63061941 -82527347 + MER81 DNA DNA 1 114 0 617 320 167 42 chr10 63061941 63062806 -82526482 + L2 LINE L2 2309 3308 -5 331 317 53 48 chr10 63062838 63063003 -82526285 - MIR SINE MIR -61 147 16 226 191 0 0 chr10 63063515 63063557 -82525731 - L2 LINE L2 -1 3312 3271 406 302 87 0 chr10 63063838 63063964 -82525324 + L2 LINE L2 2255 2391 -923 302 333 92 13 chr10 63065635 63065788 -82523500 + MIR3 SINE MIR 41 205 -3 288 304 0 0 chr10 63066162 63066231 -82523057 + polypurine Low_complexity Low_complexity 4 72 0 21 0 0 0 chr10 63067309 63067330 -82521958 + GC_rich Low_complexity Low_complexity 1 21 0 422 265 99 43 chr10 63068049 63068211 -82521077 + MIR3 SINE MIR 32 202 -6 244 268 0 0 chr10 63068647 63068703 -82520585 + (TG)n Simple_repeat Simple_repeat 1 56 0 561 282 62 5 chr10 63068928 63069123 -82520165 - MIR SINE MIR -25 237 32 308 228 76 11 chr10 63069366 63069458 -82519830 + MIR3 SINE MIR 89 186 -22 266 146 0 18 chr10 63070193 63070248 -82519040 + (GAA)n Simple_repeat Simple_repeat 3 56 0 184 320 0 77 chr10 63071292 63071370 -82517918 - MER5B DNA MER1_type -1 177 106 279 0 0 0 chr10 63071414 63071445 -82517843 + (CA)n Simple_repeat Simple_repeat 2 32 0 252 310 12 12 chr10 63072485 63072581 -82516707 + GA-rich Low_complexity Low_complexity 1 96 0 1745 142 100 7 chr10 63074792 63075102 -82514186 - MER44D DNA MER2_type 0 609 1 25 31 0 0 chr10 63075319 63075351 -82513937 + AT_rich Low_complexity Low_complexity 1 32 0 299 300 67 17 chr10 63075491 63075611 -82513677 - MIR SINE MIR -1 261 136 277 339 71 19 chr10 63076604 63076719 -82512569 + MIR SINE MIR 2 123 -85 541 165 73 9 chr10 63077527 63077636 -82511652 + L1MC2 LINE L1 6224 6339 -5 286 295 70 31 chr10 63077646 63077775 -82511513 + MIR SINE MIR 5 138 -124 21 0 0 0 chr10 63077834 63077855 -82511433 + AT_rich Low_complexity Low_complexity 1 21 0 505 302 26 16 chr10 63078386 63078575 -82510713 - MIR SINE MIR 0 262 72 22 35 0 0 chr10 63079302 63079331 -82509957 + AT_rich Low_complexity Low_complexity 1 29 0 700 158 33 0 chr10 63079356 63079476 -82509812 - L1MD1 LINE L1 -6 6236 6113 291 253 30 129 chr10 63079806 63079922 -82509366 + MIR SINE MIR 6 95 -167 2333 117 76 15 chr10 63079922 63080265 -82509023 - THE1B LTR MaLR 0 364 1 291 253 30 129 chr10 63080265 63080350 -82508938 + MIR SINE MIR 95 187 -75 985 189 22 70 chr10 63080455 63080683 -82508605 - MER20 DNA MER1_type -1 218 2 291 54 0 0 chr10 63080818 63080855 -82508433 + (CA)n Simple_repeat Simple_repeat 1 37 0 215 324 27 34 chr10 63081111 63081259 -82508029 + MER5B DNA MER1_type 2 148 -30 208 329 33 59 chr10 63081129 63081281 -82508007 - MER5A DNA MER1_type -22 167 20 * 1332 185 139 12 chr10 63081791 63082115 -82507173 - MLT1A1 LTR MaLR 0 365 1 535 243 18 0 chr10 63082152 63082263 -82507025 + MER81 DNA DNA 1 113 -1 223 293 142 19 chr10 63082563 63082669 -82506619 - MER5A DNA MER1_type -38 151 33 253 277 45 18 chr10 63084183 63084295 -82504993 + MIR SINE MIR 148 262 0 244 54 83 6 chr10 63084422 63084470 -82504818 - L1MA1 LINE L1 0 6302 6258 213 39 0 0 chr10 63086024 63086050 -82503238 + (TG)n Simple_repeat Simple_repeat 2 27 0 243 297 11 43 chr10 63086528 63086713 -82502575 + C-rich Low_complexity Low_complexity 2 180 0 210 282 29 10 chr10 63086810 63086913 -82502375 + (CA)n Simple_repeat Simple_repeat 1 105 0 1091 186 0 0 chr10 63087488 63087676 -82501612 + L1M3 LINE L1 5542 5729 -454 958 202 84 2 chr10 63087679 63087989 -82501299 + MLT1B LTR MaLR 1 386 -4 2650 113 4 87 chr10 63087989 63088227 -82501061 + L1MB3 LINE L1 5724 5980 -203 1868 158 0 3 chr10 63088227 63088512 -82500776 + AluSx SINE Alu 1 284 -28 270 0 0 0 chr10 63088512 63088542 -82500746 + (TA)n Simple_repeat Simple_repeat 2 31 0 2650 113 4 87 chr10 63088542 63088751 -82500537 + L1MB3 LINE L1 5979 6204 21 2276 109 3 3 chr10 63088751 63089054 -82500234 + AluSx SINE Alu 1 303 -9 2316 110 0 0 chr10 63089054 63089363 -82499925 + AluSx SINE Alu 1 309 -3 2650 113 4 87 chr10 63089363 63089397 -82499891 + L1MB3 LINE L1 6133 6168 -15 365 296 45 62 chr10 63089581 63089757 -82499531 + MIR SINE MIR 56 228 -34 247 339 17 9 chr10 63089866 63089981 -82499307 + MIR3 SINE MIR 72 187 -21 1938 131 0 4 chr10 63090206 63090480 -82498808 + AluSx SINE Alu 1 273 -39 2209 125 18 9 chr10 63091004 63091339 -82497949 - MER1B DNA MER1_type -1 338 1 278 214 43 68 chr10 63091566 63091683 -82497605 - L2 LINE L2 -92 3221 3108 213 276 17 0 chr10 63092720 63092778 -82496510 + L2 LINE L2 3197 3255 -58 346 283 9 44 chr10 63092911 63093024 -82496264 - MER5A DNA MER1_type -3 186 78 2464 80 0 0 chr10 63093784 63094084 -82495204 - AluY SINE Alu -11 300 1 3324 143 21 34 chr10 63094708 63095060 -82494228 - L1MA5 LINE L1 -4 6296 5952 2592 61 0 10 chr10 63095060 63095373 -82493915 - AluY SINE Alu -1 310 1 3324 143 21 34 chr10 63095373 63095587 -82493701 - L1MA5 LINE L1 -348 5952 5737 481 301 27 38 chr10 63096975 63097145 -82492143 + MLT1K LTR MaLR 129 298 -290 2006 252 93 19 chr10 63097145 63097728 -82491560 + MLT1E2 LTR MaLR 1 626 0 481 301 27 38 chr10 63097728 63097743 -82491545 + MLT1K LTR MaLR 298 312 -276 466 273 62 31 chr10 63097775 63097969 -82491319 + MLT1K LTR MaLR 377 576 -12 1063 47 78 0 chr10 63099047 63099175 -82490113 - MER85 DNA T2_type 0 139 2 1884 163 52 34 chr10 63100871 63101258 -82488030 + L1MA6 LINE L1 5903 6296 -4 1081 194 201 10 chr10 63102643 63102957 -82486331 + L1ME3A LINE L1 5789 6162 -8 848 295 75 12 chr10 63104947 63105442 -82483846 + L2 LINE L2 2727 3251 -62 821 37 37 0 chr10 63105596 63105705 -82483583 + MSTB2 LTR MaLR 1 113 -344 1849 132 4 40 chr10 63105759 63105862 -82483426 - L1P4 LINE L1 -732 5442 5337 2186 116 0 0 chr10 63105862 63106156 -82483132 + AluSg SINE Alu 1 294 -16 1849 132 4 40 chr10 63106156 63106486 -82482802 - L1P4 LINE L1 -837 5337 5019 1996 56 15 37 chr10 63106486 63106755 -82482533 + L1PA13 LINE L1 5895 6157 -6 645 107 33 8 chr10 63106756 63106877 -82482411 + GA-rich Low_complexity Low_complexity 5 128 0 1152 220 26 15 chr10 63106878 63107146 -82482142 + MSTB1 LTR MaLR 162 432 0 216 352 143 0 chr10 63108395 63108500 -82480788 - L2 LINE L2 -5 3267 3148 1965 142 10 0 chr10 63108600 63108902 -82480386 + AluSx SINE Alu 1 305 -7 186 329 38 0 chr10 63109446 63109525 -82479763 - MIR SINE MIR -46 216 135 761 248 49 22 chr10 63109555 63109781 -82479507 - L2 LINE L2 0 3313 3082 388 308 172 56 chr10 63110241 63110654 -82478634 + L1M2 LINE L1 907 1367 -5482 674 323 144 45 chr10 63111070 63111867 -82477421 + L2 LINE L2 2393 3266 -6 292 317 50 17 chr10 63112811 63112931 -82476357 + MER5A DNA MER1_type 37 160 -29 221 280 40 27 chr10 63113498 63113573 -82475715 - L2 LINE L2 -1 3271 3196 322 268 176 56 chr10 63113680 63113982 -82475306 + LTR16C LTR ERVL 152 489 -2 219 345 50 25 chr10 63113983 63114102 -82475186 - L2 LINE L2 -71 3201 3080 491 291 92 22 chr10 63114406 63114722 -82474566 + L2 LINE L2 2561 2898 -416 490 290 105 46 chr10 63116282 63116520 -82472768 - MIR SINE MIR -9 253 2 371 259 166 16 chr10 63117228 63117421 -82471867 - L1ME4a LINE L1 -84 6037 5816 630 284 31 10 chr10 63117469 63117663 -82471625 + MER20B DNA MER1_type 6 203 -580 1874 132 14 18 chr10 63117944 63118225 -82471063 - AluSx SINE Alu -18 294 15 430 290 93 48 chr10 63118284 63118477 -82470811 + L1ME4a LINE L1 5608 5820 -301 2087 131 55 0 chr10 63118477 63118806 -82470482 - MER7A DNA MER2_type -1 345 1 430 290 93 48 chr10 63118806 63118902 -82470386 + L1ME4a LINE L1 5820 5910 -211 250 239 0 28 chr10 63118906 63118977 -82470311 + (TATAA)n Simple_repeat Simple_repeat 1 69 0 279 0 0 0 chr10 63119131 63119162 -82470126 + (TG)n Simple_repeat Simple_repeat 2 32 0 1764 42 0 0 chr10 63119750 63119962 -82469326 - L1PA3 LINE L1 0 6155 5944 329 313 149 0 chr10 63120491 63120625 -82468663 - MIR3 SINE MIR -17 191 38 423 0 0 0 chr10 63121075 63121122 -82468166 + (CA)n Simple_repeat Simple_repeat 2 48 0 23 33 0 0 chr10 63121444 63121474 -82467814 + AT_rich Low_complexity Low_complexity 1 30 0 296 350 91 0 chr10 63121664 63121807 -82467481 + MIR3 SINE MIR 52 207 -1 628 292 175 7 chr10 63122046 63122337 -82466951 - MER102b DNA MER1_type 0 341 2 2593 126 15 0 chr10 63122518 63122915 -82466373 - MER57A LTR ERV1 0 403 1 1730 203 48 58 chr10 63123066 63123563 -82465725 + MLT1D LTR MaLR 1 492 -13 217 152 0 22 chr10 63124661 63124707 -82464581 + T-rich Low_complexity Low_complexity 1 45 0 257 270 50 70 chr10 63124929 63125029 -82464259 + L3 LINE CR1 1478 1575 -2 241 306 82 12 chr10 63125465 63125550 -82463738 + MIR SINE MIR 33 123 -139 256 221 15 0 chr10 63126350 63126418 -82462870 + L1ME4a LINE L1 5777 5845 -276 233 75 25 0 chr10 63126503 63126543 -82462745 + (CA)n Simple_repeat Simple_repeat 1 41 0 333 259 160 15 chr10 63126544 63126675 -82462613 + L1ME4a LINE L1 5971 6120 -1 432 204 32 0 chr10 63127604 63127697 -82461591 + MIR SINE MIR 56 151 -111 25 0 0 0 chr10 63127908 63127933 -82461355 + AT_rich Low_complexity Low_complexity 1 25 0 617 216 58 18 chr10 63128760 63128931 -82460357 + MLT1G LTR MaLR 413 590 0 232 327 69 30 chr10 63129759 63129860 -82459428 - L2 LINE L2 -32 3240 3136 243 0 0 0 chr10 63130493 63130520 -82458768 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 2118 131 6 13 chr10 63131330 63131642 -82457646 - AluSx SINE Alu 0 312 3 355 295 128 26 chr10 63131769 63131925 -82457363 - MIR SINE MIR -10 252 81 214 125 0 0 chr10 63133076 63133108 -82456180 - L2 LINE L2 -92 3180 3149 575 327 117 45 chr10 63133257 63134120 -82455168 - L2 LINE L2 -230 3042 2110 206 200 0 0 chr10 63134211 63134246 -82455042 + (TG)n Simple_repeat Simple_repeat 2 36 0 192 274 123 19 chr10 63134369 63134475 -82454813 - L2 LINE L2 -1194 2120 2004 363 44 0 0 chr10 63134971 63135016 -82454272 + (TTTA)n Simple_repeat Simple_repeat 3 47 0 636 212 0 17 chr10 63135020 63135138 -82454150 - FLAM_A SINE Alu -17 116 1 1927 114 0 11 chr10 63135236 63135508 -82453780 + AluSx SINE Alu 34 302 -10 4195 31 14 8 chr10 63136400 63136916 -82452372 + L1PA4 LINE L1 5635 6153 -2 406 285 97 11 chr10 63138012 63138198 -82451090 - LTR67 LTR ERVL 0 557 356 347 257 9 9 chr10 63138267 63138380 -82450908 - MER104 DNA Tc2 -62 118 6 340 301 20 102 chr10 63138535 63138731 -82450557 - LTR67 LTR ERVL -374 183 4 2334 122 0 0 chr10 63139655 63139966 -82449322 - AluSq SINE Alu 0 313 3 399 281 25 0 chr10 63140041 63140162 -82449126 - MIR SINE MIR -8 254 131 1379 223 74 36 chr10 63140856 63141301 -82447987 - MLT1C LTR MaLR 0 467 6 25 0 0 0 chr10 63142202 63142227 -82447061 + AT_rich Low_complexity Low_complexity 1 25 0 24 0 0 0 chr10 63142708 63142732 -82446556 + AT_rich Low_complexity Low_complexity 1 24 0 502 79 66 13 chr10 63142771 63142847 -82446441 + MADE1 DNA Mariner 1 80 0 2378 86 0 13 chr10 63143395 63143708 -82445580 + AluSp SINE Alu 1 309 -4 861 124 16 78 chr10 63144468 63144661 -82444627 + MER53 DNA DNA 7 187 -2 744 310 27 40 chr10 63145454 63145857 -82443431 + MLT1I LTR MaLR 1 398 -11 2520 64 0 3 chr10 63145939 63146251 -82443037 - AluY SINE Alu 0 311 1 2454 65 0 13 chr10 63146263 63146571 -82442717 - AluY SINE Alu -7 304 1 549 263 77 21 chr10 63146611 63146805 -82442483 - MIR SINE MIR -56 206 2 3847 62 6 2 chr10 63149521 63150019 -82439269 - L1PA7 LINE L1 -4 6150 5651 2167 120 10 0 chr10 63150632 63150923 -82438365 - AluSg SINE Alu -16 294 1 470 267 41 61 chr10 63151340 63151478 -82437810 + MER31-int LTR ERV1 3345 3445 -1491 1779 150 42 21 chr10 63151478 63151764 -82437524 + AluSg SINE Alu 1 292 -18 470 267 41 61 chr10 63151764 63151938 -82437350 + MER31-int LTR ERV1 3445 3621 -1315 279 279 34 41 chr10 63151962 63152109 -82437179 + MER31-int LTR ERV1 3842 3987 -1599 1778 148 31 10 chr10 63153045 63153336 -82435952 + AluSx SINE Alu 1 297 -15 2167 105 7 7 chr10 63153706 63154012 -82435276 + AluSx SINE Alu 3 308 -4 203 288 99 54 chr10 63154754 63154865 -82434423 - MIR SINE MIR -56 206 91 297 274 145 17 chr10 63156441 63156558 -82432730 + MIR SINE MIR 20 151 -111 188 323 10 92 chr10 63156783 63156978 -82432310 + L2 LINE L2 2811 2989 -283 216 0 0 0 chr10 63156986 63157010 -82432278 + (TAA)n Simple_repeat Simple_repeat 2 25 0 186 333 79 9 chr10 63157169 63157283 -82432005 + L2 LINE L2 3180 3301 -12 308 310 126 29 chr10 63157294 63157468 -82431820 + MIR SINE MIR 28 218 -44 224 370 43 76 chr10 63157632 63157843 -82431445 - L2 LINE L2 -4 3268 3065 1855 179 53 35 chr10 63158692 63159235 -82430053 + MLT2A2 LTR ERVL 1 554 0 236 321 18 0 chr10 63159502 63159558 -82429730 - L2 LINE L2 -8 3264 3208 226 244 73 37 chr10 63159562 63159644 -82429644 - MER5C DNA MER1_type -2 322 238 296 229 156 18 chr10 63159656 63159765 -82429523 - MER5C DNA MER1_type -200 124 1 1917 148 28 0 chr10 63160096 63160379 -82428909 + AluSx SINE Alu 3 293 -19 281 248 195 18 chr10 63161524 63161637 -82427651 + MER5A DNA MER1_type 7 139 -50 214 272 0 130 chr10 63161761 63161853 -82427435 - MER5B DNA MER1_type -98 80 1 182 111 0 0 chr10 63162457 63162484 -82426804 - L2 LINE L2 -14 3258 3232 234 0 0 0 chr10 63162844 63162870 -82426418 + (A)n Simple_repeat Simple_repeat 1 26 0 204 171 24 0 chr10 63163586 63163627 -82425661 + (TA)n Simple_repeat Simple_repeat 1 42 0 22 0 0 0 chr10 63164671 63164693 -82424595 + GC_rich Low_complexity Low_complexity 1 22 0 1134 237 60 38 chr10 63165659 63166107 -82423181 + LTR37B LTR ERV1 9 466 -2 219 167 0 0 chr10 63167583 63167619 -82421669 - L2 LINE L2 -69 3203 3168 24 85 0 0 chr10 63167624 63167683 -82421605 + AT_rich Low_complexity Low_complexity 1 59 0 484 254 216 14 chr10 63167914 63168127 -82421161 + MIR SINE MIR 6 261 -1 22 35 0 0 chr10 63168142 63168171 -82421117 + AT_rich Low_complexity Low_complexity 1 29 0 223 236 56 28 chr10 63169416 63169488 -82419800 + L2 LINE L2 2873 2946 -368 285 227 45 45 chr10 63169555 63169665 -82419623 + L2 LINE L2 3094 3203 -110 1194 87 77 0 chr10 63169680 63169863 -82419425 - MER30 DNA MER1_type -33 197 1 304 336 28 0 chr10 63169865 63169972 -82419316 + L2 LINE L2 3199 3308 -5 347 276 64 39 chr10 63170153 63170309 -82418979 + MER117 DNA MER1_type 1 160 -37 2188 118 0 0 chr10 63170482 63170779 -82418509 - AluSc SINE Alu -12 297 1 609 343 121 13 chr10 63170957 63171354 -82417934 - L3 LINE CR1 -355 1222 783 2458 70 0 0 chr10 63171498 63171800 -82417488 - AluY SINE Alu -9 302 1 837 289 106 49 chr10 63172559 63173030 -82416258 - MLT1H1 LTR MaLR -57 498 1 6495 147 49 7 chr10 63173182 63174359 -82414929 - Tigger3b DNA MER2_type -4 1227 1 21 0 0 0 chr10 63175627 63175648 -82413640 + AT_rich Low_complexity Low_complexity 1 21 0 320 300 65 55 chr10 63175717 63175902 -82413386 + MIR3 SINE MIR 8 199 -9 330 182 0 0 chr10 63175972 63176038 -82413250 + GA-rich Low_complexity Low_complexity 3 68 0 25 31 0 0 chr10 63176643 63176675 -82412613 + AT_rich Low_complexity Low_complexity 1 32 0 332 209 0 23 chr10 63177174 63177260 -82412028 - L1MC5 LINE L1 -45 7916 7833 1587 201 26 67 chr10 63177277 63177763 -82411525 - MER110A LTR ERV1 0 468 44 227 206 73 0 chr10 63177763 63177831 -82411457 - MER110A LTR ERV1 -395 73 1 1785 235 206 0 chr10 63178823 63179329 -82409959 + Zaphod DNA AcHobo 1 610 -3421 230 171 0 0 chr10 63179417 63179458 -82409830 + Zaphod DNA AcHobo 623 663 -3368 2544 198 95 38 chr10 63179459 63180167 -82409121 + Zaphod DNA AcHobo 3284 4031 0 584 304 63 81 chr10 63180293 63180628 -82408660 - MER102b DNA MER1_type -11 330 2 309 227 0 34 chr10 63180728 63180816 -82408472 + CT-rich Low_complexity Low_complexity 1 85 0 1125 197 79 55 chr10 63181281 63181571 -82407717 - AluJo SINE Alu -3 299 3 233 308 140 28 chr10 63182124 63182267 -82407021 - L3b LINE CR1 -146 1437 1279 481 287 57 6 chr10 63182296 63182453 -82406835 - MIR3 SINE MIR 0 208 44 945 197 23 163 chr10 63182514 63182992 -82406296 + MLT2D LTR ERVL 1 411 -3 1630 227 20 6 chr10 63184301 63184658 -82404630 + MLT1A2 LTR MaLR 8 369 -5 23 54 0 0 chr10 63186511 63186548 -82402740 + AT_rich Low_complexity Low_complexity 1 37 0 326 324 119 56 chr10 63186689 63186855 -82402433 + L2 LINE L2 2836 2990 -282 342 0 0 0 chr10 63186855 63186893 -82402395 + (TG)n Simple_repeat Simple_repeat 1 38 0 326 324 119 56 chr10 63186893 63187137 -82402151 + L2 LINE L2 2990 3272 0 536 313 22 11 chr10 63187417 63187596 -82401692 - MIR SINE MIR -54 208 28 330 64 0 0 chr10 63188313 63188360 -82400928 - MADE1 DNA Mariner -33 47 1 236 223 179 61 chr10 63188360 63188589 -82400699 + L1ME4a LINE L1 5720 5975 -146 192 264 38 0 chr10 63189283 63189336 -82399952 - MIR SINE MIR -174 88 34 427 298 118 65 chr10 63189664 63190036 -82399252 - MLT1K LTR MaLR -11 577 186 1041 201 124 50 chr10 63190091 63190270 -82399018 - MLT1B LTR MaLR 0 390 226 351 44 0 0 chr10 63190270 63190315 -82398973 + (GA)n Simple_repeat Simple_repeat 1 45 0 1041 201 124 50 chr10 63190315 63190498 -82398790 - MLT1B LTR MaLR -164 226 1 1661 173 7 0 chr10 63191124 63191402 -82397886 - AluJo SINE Alu -32 280 1 242 276 0 0 chr10 63192225 63192283 -82397005 + (TG)n Simple_repeat Simple_repeat 1 58 0 29 0 0 0 chr10 63192624 63192653 -82396635 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr10 63193108 63193131 -82396157 + AT_rich Low_complexity Low_complexity 1 23 0 528 278 40 26 chr10 63194940 63195091 -82394197 + MIR3 SINE MIR 17 169 -39 521 309 72 27 chr10 63195261 63195523 -82393765 - Charlie8 DNA MER1_type -2141 276 3 2920 238 66 10 chr10 63195649 63196578 -82392710 - L1M4 LINE L1 -2817 3329 2349 1326 236 67 25 chr10 63197252 63197892 -82391396 - L1ME LINE L1 -515 5720 5011 1083 265 33 23 chr10 63197924 63198231 -82391057 + LTR40a LTR ERVL 5 264 -201 1407 228 100 25 chr10 63198301 63198789 -82390499 - L1ME LINE L1 -5300 1096 572 4585 168 11 7 chr10 63198789 63199637 -82389651 - L1PB4 LINE L1 -1 6155 5301 4126 154 24 1 chr10 63199637 63200312 -82388976 - L1PA15 LINE L1 0 6165 5476 2976 65 5 0 chr10 63200325 63200709 -82388579 - L1PA7 LINE L1 0 6154 5769 3037 130 6 11 chr10 63200716 63200748 -82388540 - L1PA15 LINE L1 -654 5497 5466 7358 40 3 3 chr10 63200748 63201787 -82387501 - L1PA5 LINE L1 -7 6147 5108 3037 130 6 11 chr10 63201787 63202533 -82386755 - L1PA15 LINE L1 -685 5466 4728 * 3781 193 31 6 chr10 63202524 63203355 -82385933 - L1 LINE L1 -807 5339 4488 1839 183 35 39 chr10 63203428 63203860 -82385428 - L1MB7 LINE L1 -98 6086 5657 1740 233 83 14 chr10 63203873 63204460 -82384828 - L1MB7 LINE L1 -743 5403 4776 1795 236 29 4 chr10 63204756 63205244 -82384044 - L1MB7 LINE L1 -1381 4765 4266 21 36 0 0 chr10 63205335 63205363 -82383925 + AT_rich Low_complexity Low_complexity 1 28 0 1874 162 3 0 chr10 63205410 63205694 -82383594 + AluSx SINE Alu 1 285 -27 26 0 0 0 chr10 63205694 63205720 -82383568 + AT_rich Low_complexity Low_complexity 1 26 0 476 297 75 23 chr10 63205844 63206084 -82383204 + L1MC5 LINE L1 6618 6870 -938 22 0 0 0 chr10 63206089 63206111 -82383177 + AT_rich Low_complexity Low_complexity 1 22 0 1080 291 97 44 chr10 63206160 63207867 -82381421 + L1ME LINE L1 68 1842 -4238 382 165 116 54 chr10 63207970 63208194 -82381094 + L1ME LINE L1 1850 2087 -3993 238 310 0 0 chr10 63208201 63208288 -82381000 + L1ME LINE L1 2173 2259 -4002 2190 116 7 10 chr10 63208288 63208598 -82380690 + AluSx SINE Alu 1 309 -3 24 32 0 0 chr10 63208682 63208713 -82380575 + AT_rich Low_complexity Low_complexity 1 31 0 666 257 17 17 chr10 63208774 63209015 -82380273 + L1ME LINE L1 3673 3913 -2167 23 0 0 0 chr10 63209077 63209100 -82380188 + AT_rich Low_complexity Low_complexity 1 23 0 400 281 45 75 chr10 63209111 63209403 -82379885 - L1ME1 LINE L1 -6 6160 5878 2674 136 54 16 chr10 63209411 63209911 -82379377 - L1MA6 LINE L1 0 6300 5782 234 150 0 0 chr10 63209911 63209951 -82379337 + (TA)n Simple_repeat Simple_repeat 1 40 0 232 261 11 0 chr10 63209953 63210041 -82379247 + L1MC4 LINE L1 6615 6703 -1339 1231 139 0 0 chr10 63210082 63210283 -82379005 - L1MA6 LINE L1 -507 5793 5593 39698 75 8 5 chr10 63210314 63216451 -82372837 - L1PA5 LINE L1 -2 6152 1 1744 157 0 3 chr10 63216452 63216745 -82372543 - L1MA6 LINE L1 -686 5614 5323 * 11356 205 41 11 chr10 63216744 63222252 -82367036 + L1MA2 LINE L1 1789 7477 -246 2785 206 97 21 chr10 63222242 63223035 -82366253 + L1MB2 LINE L1 3195 4047 -2099 * 3175 171 30 16 chr10 63223035 63223677 -82365611 + L1MB2 LINE L1 5514 6164 -7 204 40 0 0 chr10 63223721 63223746 -82365542 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 26 0 0 0 chr10 63223985 63224011 -82365277 + AT_rich Low_complexity Low_complexity 1 26 0 38851 35 1 5 chr10 63224011 63229568 -82359720 - L1PA3 LINE L1 -3 6152 617 347 337 16 27 chr10 63229830 63230017 -82359271 - L1MEc LINE L1 -6173 223 39 402 296 28 39 chr10 63230047 63230226 -82359062 + L2 LINE L2 3136 3312 -1 324 298 0 55 chr10 63230360 63230541 -82358747 + A-rich Low_complexity Low_complexity 2 172 0 189 0 0 0 chr10 63232184 63232205 -82357083 + (TAGA)n Simple_repeat Simple_repeat 2 22 0 196 93 70 0 chr10 63232281 63232324 -82356964 + (TCTA)n Simple_repeat Simple_repeat 4 49 0 1256 186 55 0 chr10 63233036 63233289 -82355999 + MER58B DNA MER1_type 72 338 -3 467 219 58 80 chr10 63233344 63233481 -82355807 - MLT1K LTR MaLR -1 587 454 186 43 0 0 chr10 63234280 63234303 -82354985 + (TG)n Simple_repeat Simple_repeat 1 23 0 195 139 0 0 chr10 63234303 63234339 -82354949 + (GA)n Simple_repeat Simple_repeat 2 37 0 480 35 0 0 chr10 63234339 63234397 -82354891 + (GGAA)n Simple_repeat Simple_repeat 4 61 0 442 309 61 97 chr10 63235823 63236331 -82352957 + MLT1K LTR MaLR 67 556 -32 23 0 0 0 chr10 63237178 63237201 -82352087 + AT_rich Low_complexity Low_complexity 1 23 0 393 329 42 42 chr10 63238005 63238221 -82351067 + MIR SINE MIR 11 226 -36 208 289 124 10 chr10 63238644 63238741 -82350547 + MER5B DNA MER1_type 4 111 -67 566 285 26 0 chr10 63238881 63239032 -82350256 - MIR SINE MIR -103 159 5 1285 279 72 8 chr10 63240464 63240855 -82348433 + LTR16C LTR ERVL 74 489 -2 323 316 0 0 chr10 63241032 63241130 -82348158 + L1M3b LINE L1 617 714 -5567 189 74 0 0 chr10 63241138 63241165 -82348123 + (GAAAA)n Simple_repeat Simple_repeat 4 30 0 12932 200 23 32 chr10 63241194 63244671 -82344617 + L1ME LINE L1 2126 5578 -804 4939 190 33 21 chr10 63244676 63246117 -82343171 + L1MA7 LINE L1 4171 5647 -644 1461 191 45 31 chr10 63246117 63246405 -82342883 - AluJo SINE Alu -20 292 1 4939 190 33 21 chr10 63246405 63247045 -82342243 + L1MA7 LINE L1 5647 6278 -13 186 360 94 51 chr10 63247408 63247683 -82341605 - L2 LINE L2 -407 2907 2621 341 319 50 0 chr10 63247743 63247862 -82341426 + L2 LINE L2 3189 3313 0 1416 141 45 64 chr10 63247981 63248293 -82340995 + MER44D DNA MER2_type 1 576 -33 2391 32 7 4 chr10 63248618 63248926 -82340362 + AluY SINE Alu 1 309 0 409 291 86 32 chr10 63248957 63249149 -82340139 - MIR SINE MIR 0 262 60 583 272 59 12 chr10 63249393 63249649 -82339639 + L1ME LINE L1 5728 5992 -365 357 344 0 38 chr10 63249682 63249842 -82339446 - L2 LINE L2 -1 3271 3118 696 244 89 23 chr10 63250509 63250767 -82338521 - L1ME2 LINE L1 -335 5829 5555 2509 70 0 0 chr10 63252478 63252778 -82336510 - AluY SINE Alu -7 304 5 1030 161 35 100 chr10 63253234 63253405 -82335883 + MLT1D LTR MaLR 5 155 -350 2217 86 0 7 chr10 63253405 63253696 -82335592 - AluSc SINE Alu -20 289 1 1030 161 35 100 chr10 63253696 63253784 -82335504 + MLT1D LTR MaLR 155 247 -258 1351 31 0 0 chr10 63254231 63254393 -82334895 + L1PA4 LINE L1 5990 6151 -4 2161 110 10 0 chr10 63254906 63255245 -82334043 + AluSx SINE Alu 1 312 0 630 296 62 25 chr10 63256144 63256387 -82332901 - MIR SINE MIR 0 262 11 2492 51 0 0 chr10 63257039 63257333 -82331955 - AluY SINE Alu -17 294 1 1562 153 15 11 chr10 63257702 63257970 -82331318 - AluJb SINE Alu -28 284 16 294 29 0 0 chr10 63258860 63258895 -82330393 + (TG)n Simple_repeat Simple_repeat 2 36 0 1640 110 13 84 chr10 63258902 63259210 -82330078 - AluSx SINE Alu -26 286 1 765 313 183 1 chr10 63259427 63260070 -82329218 - L2 LINE L2 -19 3294 2538 3895 184 41 46 chr10 63260431 63261789 -82327499 - L1MB8 LINE L1 0 6178 4827 26 50 0 0 chr10 63261792 63261832 -82327456 + AT_rich Low_complexity Low_complexity 1 40 0 416 300 29 14 chr10 63262043 63262183 -82327105 - MIR SINE MIR -4 258 117 246 316 195 8 chr10 63262291 63262466 -82326822 - MIR SINE MIR -21 187 18 183 328 141 0 chr10 63262564 63262628 -82326660 + MIR SINE MIR 74 146 -62 387 215 173 37 chr10 63263657 63263871 -82325417 + L1ME4a LINE L1 5879 6121 0 722 59 0 10 chr10 63264969 63265070 -82324218 + (TTCC)n Simple_repeat Simple_repeat 3 102 0 4711 206 126 108 chr10 63267938 63270130 -82319158 + L1MCa LINE L1 4 2235 -4191 3901 197 81 77 chr10 63270136 63270422 -82318866 + L1MC3 LINE L1 5544 5827 -1958 2052 185 38 17 chr10 63270422 63270898 -82318390 + L1MB4 LINE L1 5690 6175 -5 3901 197 81 77 chr10 63270898 63272098 -82317190 + L1MC3 LINE L1 5827 7036 -749 29423 116 17 24 chr10 63272115 63277764 -82311524 + L1PA7 LINE L1 10 5718 -743 3454 65 2 13 chr10 63277769 63278231 -82311057 + L1PA7 LINE L1 6010 6466 -3 255 277 12 12 chr10 63278304 63278387 -82310901 + MLT1F1 LTR MaLR 35 117 -450 2501 183 41 29 chr10 63278388 63278634 -82310654 + L1MC3 LINE L1 7182 7424 -361 1929 107 10 31 chr10 63278634 63278952 -82310336 + AluSq SINE Alu 1 312 0 2501 183 41 29 chr10 63278952 63279295 -82309993 + L1MC3 LINE L1 7424 7779 -6 246 309 11 112 chr10 63279801 63279989 -82309299 - L2 LINE L2 -208 3064 2896 219 143 20 61 chr10 63280521 63280570 -82308718 - L2 LINE L2 0 3313 3267 727 265 148 15 chr10 63280586 63280911 -82308377 - MLT1J2 LTR MaLR 0 450 83 2049 155 40 0 chr10 63282522 63282871 -82306417 - THE1B LTR MaLR 0 364 2 1171 143 14 38 chr10 63283315 63283524 -82305764 + Tigger3(Golem) DNA MER2_type 2825 3028 -1 180 0 0 0 chr10 63283630 63283650 -82305638 + (CA)n Simple_repeat Simple_repeat 2 21 0 335 337 80 12 chr10 63283824 63283987 -82305301 - MIR3 SINE MIR -11 197 24 237 56 42 69 chr10 63284028 63284100 -82305188 + (CATTA)n Simple_repeat Simple_repeat 4 73 0 2055 129 0 0 chr10 63284137 63284415 -82304873 + AluSx SINE Alu 6 283 -29 198 360 0 22 chr10 63284474 63284563 -82304725 - MER5A DNA MER1_type -83 106 20 250 267 40 50 chr10 63285599 63285700 -82303588 - MIR3 SINE MIR -19 189 90 205 363 53 9 chr10 63286540 63286653 -82302635 - L3b LINE CR1 -197 1386 1269 319 253 69 87 chr10 63287367 63287716 -82301572 + L1ME4a LINE L1 5674 6016 -105 1235 192 93 126 chr10 63287803 63288446 -82300842 + MLT1E3 LTR MaLR 8 624 0 423 311 142 14 chr10 63288691 63288903 -82300385 - L3 LINE CR1 -32 1545 1307 406 336 205 21 chr10 63289337 63289496 -82299792 - L3 LINE CR1 -2 1575 1446 2820 113 70 28 chr10 63289496 63290036 -82299252 - L1MA8 LINE L1 0 6291 5729 406 336 205 21 chr10 63290036 63290203 -82299085 - L3 LINE CR1 -131 1446 1189 333 47 0 0 chr10 63290235 63290278 -82299010 + (TG)n Simple_repeat Simple_repeat 1 43 0 2534 155 6 21 chr10 63290430 63290907 -82298381 + L1MA7 LINE L1 5817 6286 -5 1946 160 21 19 chr10 63291160 63291534 -82297754 - THE1C LTR MaLR 0 375 1 2366 100 3 0 chr10 63292022 63292333 -82296955 - AluSp SINE Alu -1 312 1 6780 58 15 4 chr10 63292333 63293351 -82295937 - L1PA8 LINE L1 -3 6169 5127 361 239 86 150 chr10 63293522 63293848 -82295440 + MLT1H1 LTR MaLR 62 366 -189 1244 142 33 84 chr10 63293935 63293973 -82295315 - MER93b LTR ERV1 0 373 335 1586 103 4 50 chr10 63293973 63294234 -82295054 + L1PA10 LINE L1 5915 6163 -5 1244 142 33 84 chr10 63294234 63294470 -82294818 - MER93b LTR ERV1 -38 335 113 455 139 23 0 chr10 63294660 63294746 -82294542 + L1MD2 LINE L1 6259 6346 -13 2049 200 21 74 chr10 63295361 63295940 -82293348 - MLT2B3 LTR ERVL -6 548 1 274 279 8 101 chr10 63295984 63296113 -82293175 - MIR SINE MIR -83 179 63 261 245 160 19 chr10 63296424 63296530 -82292758 + MIR SINE MIR 23 143 -119 207 358 0 0 chr10 63296593 63296660 -82292628 - MER5A DNA MER1_type -48 141 75 24 53 0 0 chr10 63297160 63297198 -82292090 + AT_rich Low_complexity Low_complexity 1 38 0 207 0 0 0 chr10 63297496 63297519 -82291769 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2580 195 22 48 chr10 63298285 63298978 -82290310 + L1MA5 LINE L1 1361 2035 -4814 2808 103 92 9 chr10 63298993 63299438 -82289850 + LTR19C LTR ERV1 211 692 -87 243 61 0 0 chr10 63299467 63299500 -82289788 + (TAAA)n Simple_repeat Simple_repeat 1 33 0 3982 193 77 18 chr10 63299502 63299628 -82289660 + L1MA5 LINE L1 2067 2184 -4664 2045 150 0 0 chr10 63299628 63299928 -82289360 + AluSx SINE Alu 1 300 -12 3982 193 77 18 chr10 63299928 63301680 -82287608 + L1MA5 LINE L1 2184 4059 -2789 4669 242 88 41 chr10 63301683 63303525 -82285763 - L1M2b LINE L1 -5281 1928 1 357 225 9 0 chr10 63303578 63303689 -82285599 + L1MA5 LINE L1 4057 4168 -2680 8298 167 49 11 chr10 63303803 63306569 -82282719 + L1MA5 LINE L1 4128 7002 0 710 364 98 24 chr10 63306998 63307592 -82281696 + L3 LINE CR1 228 865 -712 712 239 48 68 chr10 63307599 63307850 -82281438 + MIR SINE MIR 13 258 -4 222 343 59 10 chr10 63307882 63307984 -82281304 + L3 LINE CR1 900 1006 -571 23 54 0 0 chr10 63308404 63308441 -82280847 + AT_rich Low_complexity Low_complexity 1 37 0 7820 120 17 31 chr10 63308573 63309622 -82279666 + HSMAR2 DNA Mariner 2 1065 -237 4241 70 2 0 chr10 63309622 63310167 -82279121 + L1PA7 LINE L1 5598 6143 -11 7820 120 17 31 chr10 63310167 63310188 -82279100 + HSMAR2 DNA Mariner 1065 1085 -217 2184 116 0 10 chr10 63310188 63310491 -82278797 - AluSq SINE Alu -13 300 1 7820 120 17 31 chr10 63310491 63310738 -82278550 + HSMAR2 DNA Mariner 1085 1301 -1 456 256 102 23 chr10 63310748 63310924 -82278364 - L3 LINE CR1 -11 1566 1377 319 265 86 89 chr10 63311130 63311455 -82277833 - MER5C DNA MER1_type 0 324 1 21 36 0 0 chr10 63312137 63312165 -82277123 + AT_rich Low_complexity Low_complexity 1 28 0 180 111 0 0 chr10 63312767 63312794 -82276494 + (TTCA)n Simple_repeat Simple_repeat 2 28 0 21 36 0 0 chr10 63313889 63313917 -82275371 + AT_rich Low_complexity Low_complexity 1 28 0 243 0 0 0 chr10 63313950 63313977 -82275311 + (T)n Simple_repeat Simple_repeat 1 27 0 20281 71 3 3 chr10 63314328 63317854 -82271434 + L1PA6 LINE L1 2627 6151 -3 11423 25 1 0 chr10 63318641 63320662 -82268626 - L1PA3 LINE L1 -148 6007 3985 296 279 15 0 chr10 63320664 63320732 -82268556 + L2 LINE L2 3203 3271 -1 207 114 0 0 chr10 63320887 63320922 -82268366 + (GA)n Simple_repeat Simple_repeat 1 35 0 202 235 118 0 chr10 63321056 63321124 -82268164 - L2 LINE L2 -37 3235 3160 189 0 0 0 chr10 63322015 63322036 -82267252 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 312 250 147 26 chr10 63323135 63323251 -82266037 - MIR3 SINE MIR -21 187 58 3463 179 26 15 chr10 63324555 63325275 -82264013 - L1MB8 LINE L1 -6 6172 5445 234 207 171 45 chr10 63325379 63325490 -82263798 + L2 LINE L2 3185 3309 -4 223 233 189 0 chr10 63325504 63325594 -82263694 - L2 LINE L2 -23 3290 3184 414 94 0 0 chr10 63325841 63325905 -82263383 + (TG)n Simple_repeat Simple_repeat 1 64 0 2132 154 42 7 chr10 63326028 63326504 -82262784 - L1P3 LINE L1 -5675 786 2 320 236 120 89 chr10 63326653 63326968 -82262320 - MLT1J2 LTR MaLR -125 325 6 1397 284 46 65 chr10 63328069 63328541 -82260747 - L2 LINE L2 -61 3252 2805 2013 165 6 15 chr10 63328541 63328881 -82260407 + MER1B DNA MER1_type 1 337 0 1397 284 46 65 chr10 63328881 63329170 -82260118 - L2 LINE L2 -508 2805 2512 969 213 0 0 chr10 63329171 63329345 -82259943 + AluJb SINE Alu 137 310 -2 306 200 0 0 chr10 63329345 63329405 -82259883 - L2 LINE L2 -795 2519 2460 610 300 81 29 chr10 63329430 63329777 -82259511 + MLT1I LTR MaLR 27 391 -18 1139 272 15 30 chr10 63329794 63330132 -82259156 - L2 LINE L2 -850 2464 2132 576 286 65 0 chr10 63330132 63330317 -82258971 - L2 LINE L2 -1413 1901 1705 401 294 94 56 chr10 63330418 63330651 -82258637 - MIR SINE MIR -6 256 2 1092 183 65 9 chr10 63331285 63331570 -82257718 - MLT1A1 LTR MaLR 0 365 1 879 251 0 5 chr10 63332331 63332534 -82256754 - MLT1A2 LTR MaLR 0 374 173 305 98 0 20 chr10 63332534 63332585 -82256703 + (GA)n Simple_repeat Simple_repeat 2 51 0 759 150 50 50 chr10 63332591 63332771 -82256517 - MLT1A2 LTR MaLR -194 180 1 347 248 0 40 chr10 63332893 63332994 -82256294 + MLT1K LTR MaLR 492 588 0 200 234 0 43 chr10 63334051 63334098 -82255190 + polypyrimidine Low_complexity Low_complexity 1 45 0 222 277 71 80 chr10 63334196 63334276 -82255012 + MIR SINE MIR 44 124 -138 1167 166 5 0 chr10 63334276 63334475 -82254813 + L1PB4 LINE L1 5947 6146 -10 222 277 71 80 chr10 63334475 63334506 -82254782 + MIR SINE MIR 124 154 -108 2908 188 55 6 chr10 63334975 63335597 -82253691 + L1MB7 LINE L1 5500 6151 -33 326 215 36 70 chr10 63335776 63335881 -82253407 - MIR SINE MIR -67 141 58 2647 147 45 2 chr10 63337065 63337513 -82251775 - LTR24 LTR ERV1 0 467 1 403 264 55 9 chr10 63337515 63337625 -82251663 - L2 LINE L2 -5 3267 3153 22 35 0 0 chr10 63337949 63337978 -82251310 + AT_rich Low_complexity Low_complexity 1 29 0 761 92 40 0 chr10 63338222 63338395 -82250893 + (TA)n Simple_repeat Simple_repeat 1 180 0 25 0 0 0 chr10 63338395 63338420 -82250868 + AT_rich Low_complexity Low_complexity 1 25 0 832 76 11 33 chr10 63338420 63338604 -82250684 + (TA)n Simple_repeat Simple_repeat 1 180 0 448 150 0 0 chr10 63338862 63338942 -82250346 - MADE1 DNA Mariner 0 80 1 1583 203 62 23 chr10 63339652 63339671 -82249617 + L1MB8 LINE L1 5723 5740 -438 1167 147 82 147 chr10 63339671 63340168 -82249120 - MER4C LTR ERV1 0 465 1 1583 203 62 23 chr10 63340168 63340582 -82248706 + L1MB8 LINE L1 5740 6173 -5 250 309 62 10 chr10 63341199 63341296 -82247992 - MIR SINE MIR -67 141 40 470 364 138 4 chr10 63341389 63341614 -82247674 + MIR SINE MIR 8 262 0 295 325 9 9 chr10 63341716 63341830 -82247458 - L3 LINE CR1 -664 913 800 1841 167 38 24 chr10 63342436 63342777 -82246511 + MER7A DNA MER2_type 3 346 0 180 0 0 0 chr10 63342883 63342903 -82246385 + (CA)n Simple_repeat Simple_repeat 2 21 0 335 337 80 12 chr10 63343077 63343240 -82246048 - MIR3 SINE MIR -11 197 24 237 56 42 69 chr10 63343281 63343353 -82245935 + (CATTA)n Simple_repeat Simple_repeat 4 73 0 2055 129 0 0 chr10 63343390 63343668 -82245620 + AluSx SINE Alu 6 283 -29 198 360 0 22 chr10 63343727 63343816 -82245472 - MER5A DNA MER1_type -83 106 20 250 267 40 50 chr10 63344853 63344954 -82244334 - MIR3 SINE MIR -19 189 90 200 199 45 51 chr10 63345906 63346082 -82243206 + (TTATA)n Simple_repeat Simple_repeat 1 175 0 187 339 0 15 chr10 63346461 63346526 -82242762 - MIR SINE MIR -129 79 16 202 262 115 0 chr10 63346680 63346741 -82242547 + MIR SINE MIR 88 155 -107 871 199 64 131 chr10 63346865 63347363 -82241925 + MER63D DNA MER1_type 4 599 -462 1217 174 17 0 chr10 63347371 63347601 -82241687 + L1MB5 LINE L1 5941 6174 0 195 42 0 0 chr10 63347790 63347814 -82241474 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 234 0 0 0 chr10 63348277 63348303 -82240985 + (T)n Simple_repeat Simple_repeat 1 26 0 1553 241 47 20 chr10 63349184 63349633 -82239655 + MLT1C LTR MaLR 7 467 0 225 296 114 45 chr10 63349712 63349844 -82239444 - MIR SINE MIR -102 160 20 1006 219 20 30 chr10 63349913 63350210 -82239078 + L1ME2 LINE L1 5727 6020 -144 940 65 0 0 chr10 63350364 63350488 -82238800 - L1PA2 LINE L1 -1 6154 6031 1071 133 0 0 chr10 63450495 63450660 -82138628 - MSTA LTR MaLR -263 165 1 668 333 43 55 chr10 63450669 63451263 -82138025 - L2 LINE L2 -252 3020 2433 2189 155 39 11 chr10 63451263 63451618 -82137670 + MLT1A1 LTR MaLR 1 365 0 668 333 43 55 chr10 63451618 63451687 -82137601 - L2 LINE L2 -839 2433 2365 354 369 44 5 chr10 63451801 63452007 -82137281 + L3 LINE CR1 1208 1421 -156 536 337 55 1 chr10 63452007 63452211 -82137077 - MIR SINE MIR -38 224 5 2287 67 3 34 chr10 63452384 63452495 -82136793 - L1PA8 LINE L1 -6 6166 6053 2919 3 0 0 chr10 63452495 63452805 -82136483 - AluY SINE Alu -1 310 1 2287 67 3 34 chr10 63452805 63452991 -82136297 - L1PA8 LINE L1 -119 6053 5878 237 65 0 0 chr10 63453012 63453043 -82136245 + (TG)n Simple_repeat Simple_repeat 2 32 0 192 247 65 65 chr10 63453730 63453823 -82135465 + MIR SINE MIR 84 176 -86 476 335 31 0 chr10 63454438 63454599 -82134689 - MIR SINE MIR -1 261 96 2359 184 28 49 chr10 63455029 63455652 -82133636 + L1MD2 LINE L1 5102 5717 -642 1255 231 89 32 chr10 63455646 63455800 -82133488 + L1MD2 LINE L1 5967 6111 -248 * 234 0 0 0 chr10 63455800 63455826 -82133462 + (CA)n Simple_repeat Simple_repeat 2 27 0 1255 231 89 32 chr10 63455826 63455924 -82133364 + L1MD2 LINE L1 6111 6202 -157 2464 92 0 0 chr10 63455924 63456228 -82133060 + AluSx SINE Alu 1 304 -8 1255 231 89 32 chr10 63456228 63456346 -82132942 + L1MD2 LINE L1 6202 6359 0 192 303 0 101 chr10 63456583 63456672 -82132616 + MIR SINE MIR 20 99 -109 1318 191 40 117 chr10 63457651 63458054 -82131234 + MLT1A2 LTR MaLR 1 372 -2 1238 156 224 28 chr10 63458754 63458887 -82130401 - AluJo SINE Alu -2 300 194 218 0 94 0 chr10 63458887 63458919 -82130369 + T-rich Low_complexity Low_complexity 1 35 0 1238 156 224 28 chr10 63458919 63459035 -82130253 - AluJo SINE Alu -108 194 2 1087 235 32 0 chr10 63459542 63459759 -82129529 + MER58A DNA MER1_type 1 224 0 1779 148 15 107 chr10 63459774 63459934 -82129354 - MLT1A1 LTR MaLR -8 357 184 2283 92 6 13 chr10 63459934 63460249 -82129039 - AluSp SINE Alu 0 313 1 1779 148 15 107 chr10 63460249 63460481 -82128807 - MLT1A1 LTR MaLR -181 184 1 402 21 0 0 chr10 63460503 63460550 -82128738 + (CA)n Simple_repeat Simple_repeat 2 48 0 1992 181 14 32 chr10 63461032 63461402 -82127886 - MLT1A1 LTR MaLR -2 363 1 2251 101 3 19 chr10 63461626 63461934 -82127354 + AluSg SINE Alu 1 303 -7 2540 98 21 0 chr10 63461948 63462283 -82127005 + L1MA1 LINE L1 5957 6298 -4 2354 86 0 0 chr10 63462292 63462583 -82126705 + AluY SINE Alu 1 291 -20 3214 152 16 6 chr10 63462625 63463119 -82126169 + MER1A DNA MER1_type 31 529 0 2233 107 0 0 chr10 63463261 63463581 -82125707 + AluSx SINE Alu 1 320 0 2638 152 96 121 chr10 63463597 63463769 -82125519 - L1MC3 LINE L1 -21 7764 7589 1982 143 37 0 chr10 63463769 63464063 -82125225 + AluJo SINE Alu 6 310 -2 2638 152 96 121 chr10 63464063 63464475 -82124813 - L1MC3 LINE L1 -196 7589 7132 265 278 14 0 chr10 63464475 63464547 -82124741 - MLT1F1 LTR MaLR -444 123 51 2638 152 96 121 chr10 63464547 63464706 -82124582 - L1MC3 LINE L1 -653 7132 6970 315 242 118 13 chr10 63465984 63466137 -82123151 - L1ME4a LINE L1 -76 6045 5877 327 321 87 73 chr10 63466139 63466645 -82122643 - L1MC4a LINE L1 -137 7671 7154 1971 107 38 7 chr10 63466645 63466936 -82122352 - AluSx SINE Alu -12 300 1 327 321 87 73 chr10 63466936 63467042 -82122246 - L1MC4a LINE L1 -654 7154 7051 212 229 14 43 chr10 63467672 63467742 -82121546 - MIR SINE MIR -119 143 76 792 279 32 29 chr10 63467824 63468104 -82121184 + MLT1L LTR MaLR 197 477 -138 2052 91 73 0 chr10 63468858 63469132 -82120156 - AluSc SINE Alu -15 294 1 2145 152 20 3 chr10 63469848 63470197 -82119091 + MER57A LTR ERV1 1 355 -48 4172 132 25 25 chr10 63470489 63471124 -82118164 - MER41B LTR ERV1 0 635 1 195 129 0 0 chr10 63471159 63471190 -82118098 + (CAT)n Simple_repeat Simple_repeat 2 32 0 187 273 33 66 chr10 63471318 63471439 -82117849 - MIR SINE MIR -94 168 52 4444 89 40 3 chr10 63471631 63472237 -82117051 + L1PA14 LINE L1 5534 6161 0 538 205 102 19 chr10 63473507 63473722 -82115566 + Charlie5 DNA MER1_type 2391 2623 0 1712 110 64 36 chr10 63474051 63474332 -82114956 - AluJb SINE Alu -23 289 1 2128 121 7 0 chr10 63474783 63475072 -82114216 + AluSc SINE Alu 5 295 -14 573 292 71 22 chr10 63475700 63475926 -82113362 - MIR SINE MIR -14 248 12 196 282 45 64 chr10 63476271 63476381 -82112907 - MIR SINE MIR -125 137 30 4076 166 48 34 chr10 63476400 63477003 -82112285 + LTR39 LTR ERV1 1 619 -164 2008 159 0 7 chr10 63477003 63477305 -82111983 + AluSx SINE Alu 1 300 -12 4076 166 48 34 chr10 63477305 63477473 -82111815 + LTR39 LTR ERV1 619 783 0 367 282 149 37 chr10 63477874 63478115 -82111173 + L2 LINE L2 2472 2739 -575 501 130 0 0 chr10 63478312 63478404 -82110884 + MER53 DNA DNA 95 186 -3 949 243 38 4 chr10 63478408 63478671 -82110617 + L1ME2 LINE L1 5844 6115 -49 240 226 11 86 chr10 63478992 63479085 -82110203 + L2 LINE L2 3176 3261 -52 327 323 99 17 chr10 63479412 63479644 -82109644 + LTR33 LTR ERVL 1 251 -270 819 274 103 19 chr10 63479711 63480130 -82109158 - LTR16A LTR ERVL 0 457 4 238 234 43 21 chr10 63480177 63480271 -82109017 + LTR33 LTR ERVL 423 518 -3 372 43 0 0 chr10 63480271 63480317 -82108971 + (CA)n Simple_repeat Simple_repeat 2 47 0 465 275 77 69 chr10 63480319 63480551 -82108737 - L1MC4a LINE L1 -1929 5879 5641 1669 185 0 0 chr10 63480551 63480832 -82108456 - AluJb SINE Alu -3 309 29 465 275 77 69 chr10 63480832 63480988 -82108300 - L1MC4a LINE L1 -2167 5641 5488 316 294 104 45 chr10 63482041 63482247 -82107041 + MIR SINE MIR 1 212 -50 2962 230 126 79 chr10 63482651 63483500 -82105788 + L2 LINE L2 1773 2581 -732 1648 180 7 17 chr10 63483500 63483795 -82105493 + AluJo SINE Alu 1 292 -20 2962 230 126 79 chr10 63483795 63484089 -82105199 + L2 LINE L2 2581 2860 -453 7815 75 7 19 chr10 63484089 63485172 -82104116 - MER11C LTR ERVK 0 1071 1 2962 230 126 79 chr10 63485172 63485424 -82103864 + L2 LINE L2 2860 3215 -98 650 309 94 55 chr10 63485939 63486036 -82103252 + MLT1L LTR MaLR 44 136 -479 1754 180 7 7 chr10 63486036 63486325 -82102963 - AluJo SINE Alu -23 289 1 650 309 94 55 chr10 63486325 63486768 -82102520 + MLT1L LTR MaLR 136 605 -10 352 179 143 77 chr10 63487160 63487328 -82101960 + L1MC4a LINE L1 5256 5434 -2374 378 333 79 12 chr10 63487427 63487667 -82101621 + L1MC4a LINE L1 6336 6591 -1217 617 238 99 36 chr10 63487704 63487956 -82101332 + L1MC5 LINE L1 6652 6919 -1042 2585 96 16 0 chr10 63488067 63488452 -82100836 - L1M2 LINE L1 -550 5747 5357 561 147 17 52 chr10 63488453 63488569 -82100719 - FRAM SINE Alu -7 169 58 1499 250 25 0 chr10 63488570 63488890 -82100398 + L1M2c LINE L1 1234 1561 -5228 180 0 0 0 chr10 63488897 63488917 -82100371 + (TTATA)n Simple_repeat Simple_repeat 3 22 0 9720 200 28 13 chr10 63488917 63489801 -82099487 - L1 LINE L1 -1752 5036 4167 1975 147 30 0 chr10 63489801 63490100 -82099188 - AluSx SINE Alu -2 310 3 9720 200 28 13 chr10 63490100 63494490 -82094798 - L1 LINE L1 -2621 4167 14 373 250 36 0 chr10 63494548 63494632 -82094656 + LTR16A LTR ERVL 233 319 -131 410 309 27 0 chr10 63494657 63494767 -82094521 + L2 LINE L2 3158 3270 -2 244 189 19 0 chr10 63495043 63495096 -82094192 - LTR16A LTR ERVL -20 430 377 26 50 0 0 chr10 63495375 63495415 -82093873 + AT_rich Low_complexity Low_complexity 1 40 0 551 249 254 28 chr10 63496023 63496236 -82093052 - MIR SINE MIR 0 262 2 1908 183 0 0 chr10 63496371 63496666 -82092622 - AluSx SINE Alu -17 295 1 221 146 188 0 chr10 63497944 63497992 -82091296 + MIR SINE MIR 156 212 -50 25 31 0 0 chr10 63498143 63498175 -82091113 + AT_rich Low_complexity Low_complexity 1 32 0 479 341 6 18 chr10 63498202 63498372 -82090916 + MER5B DNA MER1_type 7 174 -4 228 35 0 0 chr10 63498521 63498550 -82090738 + (CA)n Simple_repeat Simple_repeat 1 29 0 24 0 0 0 chr10 63498962 63498986 -82090302 + AT_rich Low_complexity Low_complexity 1 24 0 2361 68 0 23 chr10 63499895 63500203 -82089085 + AluY SINE Alu 1 301 -10 617 327 14 9 chr10 63501549 63501763 -82087525 - MIR SINE MIR -37 225 11 2275 87 0 7 chr10 63501767 63502081 -82087207 + AluSc SINE Alu 1 309 0 889 98 8 0 chr10 63503427 63503550 -82085738 - L1PA10 LINE L1 -15 6153 6030 1445 222 33 0 chr10 63503741 63504070 -82085218 - MER58B DNA MER1_type -1 340 1 2278 146 68 54 chr10 63504563 63505173 -82084115 + MER4B LTR ERV1 1 778 -1 627 255 27 0 chr10 63505174 63505323 -82083965 - MIR SINE MIR -108 154 2 31 0 0 0 chr10 63505897 63505928 -82083360 + AT_rich Low_complexity Low_complexity 1 31 0 20206 95 31 32 chr10 63506140 63509112 -82080176 + L1PA7 LINE L1 2359 5333 -821 2141 129 13 0 chr10 63509112 63509421 -82079867 + AluSq SINE Alu 1 313 0 20206 95 31 32 chr10 63509421 63509835 -82079453 + L1PA7 LINE L1 5333 5776 -378 2368 115 0 3 chr10 63509835 63510149 -82079139 + AluSp SINE Alu 1 313 0 20206 95 31 32 chr10 63510149 63510524 -82078764 + L1PA7 LINE L1 5776 6150 -4 27 49 0 0 chr10 63510765 63510806 -82078482 + AT_rich Low_complexity Low_complexity 1 41 0 254 248 197 30 chr10 63511618 63511816 -82077472 + L1MC5 LINE L1 7701 7931 -30 2192 126 0 10 chr10 63512771 63513081 -82076207 + AluSx SINE Alu 1 307 -5 4023 206 139 36 chr10 63513132 63514451 -82074837 + Charlie1a DNA MER1_type 1 1455 0 281 297 67 0 chr10 63515324 63515438 -82073850 + MIR SINE MIR 76 206 -56 748 198 59 5 chr10 63516122 63516309 -82072979 + Charlie1 DNA MER1_type 1993 2189 -572 1613 118 4 4 chr10 63516312 63516541 -82072747 + AluSx SINE Alu 1 229 -83 309 224 24 0 chr10 63516565 63516650 -82072638 + Charlie1 DNA MER1_type 2174 2260 -501 254 344 66 13 chr10 63516952 63517103 -82072185 - MIR SINE MIR -30 232 74 460 288 88 94 chr10 63517145 63517331 -82071957 - MIR SINE MIR -63 145 3 328 220 68 76 chr10 63517773 63517891 -82071397 - MIR SINE MIR -66 196 80 282 262 38 71 chr10 63517996 63518179 -82071109 + MERVL LTR ERVL 1750 1926 -3559 424 228 218 78 chr10 63518506 63518712 -82070576 + MIR SINE MIR 26 260 -2 667 253 34 0 chr10 63519930 63520076 -82069212 + MIR SINE MIR 29 179 -83 276 304 0 0 chr10 63520226 63520295 -82068993 - MIR3 SINE MIR -31 177 109 295 165 165 13 chr10 63520400 63520479 -82068809 + L1ME3A LINE L1 5448 5538 -628 922 239 37 74 chr10 63520586 63520937 -82068351 + L1ME3A LINE L1 5809 6146 -24 374 342 34 20 chr10 63521892 63522041 -82067247 - MIR3 SINE MIR -6 202 52 3389 173 32 34 chr10 63522132 63522843 -82066445 + MER50 LTR ERV1 1 710 -24 2134 126 3 3 chr10 63523398 63523699 -82065589 + AluSx SINE Alu 1 301 -11 813 139 168 81 chr10 63523975 63524009 -82065279 - AluJo SINE Alu -123 189 159 21 0 0 0 chr10 63524009 63524030 -82065258 + AT_rich Low_complexity Low_complexity 1 21 0 813 139 168 81 chr10 63524030 63524148 -82065140 - AluJo SINE Alu -153 159 2 448 171 105 23 chr10 63524149 63524274 -82065014 - MER33 DNA MER1_type -262 62 1 1857 10 0 0 chr10 63524647 63524845 -82064443 - L1PA3 LINE L1 -4 6151 5954 2898 16 0 0 chr10 63525282 63525600 -82063688 - AluYb8 SINE Alu 0 318 1 1305 214 21 104 chr10 63526068 63526499 -82062789 - MLT2C1 LTR ERVL -2 395 1 353 310 6 57 chr10 63527423 63527456 -82061832 + MER5B DNA MER1_type 29 62 -116 1902 151 0 7 chr10 63527456 63527768 -82061520 + AluJb SINE Alu 1 310 0 353 310 6 57 chr10 63527768 63527891 -82061397 + MER5B DNA MER1_type 62 178 0 1312 27 13 37 chr10 63528156 63528644 -82060644 + (TATATG)n Simple_repeat Simple_repeat 1 476 0 419 293 32 0 chr10 63528757 63528880 -82060408 - MIR3 SINE MIR -46 162 36 690 187 114 42 chr10 63528955 63529121 -82060167 + MER45A DNA AcHobo 1 178 0 268 326 148 7 chr10 63529845 63529980 -82059308 - MIR3 SINE MIR -18 190 37 398 339 53 32 chr10 63530461 63530650 -82058638 + L2 LINE L2 3080 3272 0 21 0 0 0 chr10 63531289 63531310 -82057978 + AT_rich Low_complexity Low_complexity 1 21 0 761 232 152 39 chr10 63531416 63531726 -82057562 - LTR16A LTR ERVL -9 441 97 234 306 32 0 chr10 63531815 63531939 -82057349 - L1MC4a LINE L1 -1813 5995 5868 1159 248 145 60 chr10 63532030 63532727 -82056561 - L1MC4a LINE L1 -1636 6172 5417 676 112 10 0 chr10 63532727 63532825 -82056463 - AluSg/x SINE Alu -4 305 207 381 271 136 64 chr10 63532896 63533456 -82055832 - L1MC4a LINE L1 -1322 4824 4225 2085 95 15 4 chr10 63533689 63533962 -82055326 - AluSq SINE Alu -37 276 1 413 297 153 16 chr10 63533966 63534410 -82054878 - L1MC4a LINE L1 -1983 4163 3659 1797 167 26 3 chr10 63534442 63534747 -82054541 + AluJo SINE Alu 1 312 0 1012 165 6 11 chr10 63536790 63536966 -82052322 + AluJb SINE Alu 129 303 -9 2244 96 0 3 chr10 63537559 63537850 -82051438 + AluSx SINE Alu 1 290 -22 311 165 76 13 chr10 63539075 63539154 -82050134 + L1MB8 LINE L1 5498 5581 -603 985 187 0 21 chr10 63539154 63539341 -82049947 + L1MB7 LINE L1 5993 6175 -9 2230 64 11 4 chr10 63540368 63540674 -82048614 - AluY SINE Alu 0 308 1 2302 56 3 11 chr10 63540681 63540996 -82048292 - AluY SINE Alu 0 313 1 2087 124 7 0 chr10 63541277 63541560 -82047728 + AluSx SINE Alu 1 285 -27 210 191 0 0 chr10 63541560 63541602 -82047686 + (CATATA)n Simple_repeat Simple_repeat 3 44 0 22 0 0 0 chr10 63541603 63541625 -82047663 + AT_rich Low_complexity Low_complexity 1 22 0 2386 147 29 36 chr10 63541659 63542102 -82047186 + L1MB8 LINE L1 5739 6178 0 342 206 0 0 chr10 63542124 63542197 -82047091 + L1ME1 LINE L1 6089 6161 -5 10229 28 0 178 chr10 63542824 63544551 -82044737 + SVA Other Other 1 1430 0 299 321 47 0 chr10 63544579 63544685 -82044603 + MIR SINE MIR 45 155 -107 183 114 0 0 chr10 63544720 63544755 -82044533 + (A)n Simple_repeat Simple_repeat 1 35 0 2122 97 3 21 chr10 63545490 63545778 -82043510 - AluSq SINE Alu -7 306 24 866 270 17 13 chr10 63546198 63546435 -82042853 + MIR SINE MIR 9 246 -16 366 23 0 0 chr10 63546659 63546702 -82042586 + (CA)n Simple_repeat Simple_repeat 2 44 0 261 300 0 0 chr10 63548768 63548838 -82040450 + L2 LINE L2 3244 3313 0 1395 181 12 12 chr10 63549889 63550137 -82039151 - AluJb SINE Alu -24 288 41 673 245 20 103 chr10 63550386 63550471 -82038817 + Charlie8 DNA MER1_type 27 117 -224 2332 68 3 13 chr10 63550471 63550778 -82038510 - AluY SINE Alu -7 304 1 673 245 20 103 chr10 63550778 63550945 -82038343 + Charlie8 DNA MER1_type 117 258 -83 221 259 19 0 chr10 63551128 63551182 -82038106 - MIR3 SINE MIR -46 162 108 288 239 204 11 chr10 63552116 63552204 -82037084 + MIR SINE MIR 6 110 -152 22 35 0 0 chr10 63552265 63552294 -82036994 + AT_rich Low_complexity Low_complexity 1 29 0 1414 109 97 12 chr10 63553178 63553388 -82035900 + L1MA8 LINE L1 5561 5797 -494 207 0 0 0 chr10 63553388 63553411 -82035877 + (CA)n Simple_repeat Simple_repeat 2 24 0 1414 109 97 12 chr10 63553411 63553448 -82035840 + L1MA8 LINE L1 5797 5829 -462 2296 86 0 43 chr10 63553448 63553774 -82035514 + AluSx SINE Alu 1 312 0 924 138 7 7 chr10 63553811 63553956 -82035332 + AluJb SINE Alu 85 229 -83 878 90 15 0 chr10 63553990 63554123 -82035165 + (GGGAA)n Simple_repeat Simple_repeat 5 139 0 1526 131 54 74 chr10 63554128 63554479 -82034809 + L1MA8 LINE L1 5930 6273 -18 189 154 0 0 chr10 63556636 63556675 -82032613 + GA-rich Low_complexity Low_complexity 1 39 0 450 0 0 0 chr10 63557142 63557192 -82032096 + (CA)n Simple_repeat Simple_repeat 1 50 0 437 246 157 0 chr10 63557945 63558079 -82031209 + L1ME3A LINE L1 6007 6161 -9 2039 113 21 3 chr10 63558082 63558366 -82030922 - AluSx SINE Alu -23 289 1 266 249 62 20 chr10 63558711 63558862 -82030426 - Charlie8 DNA MER1_type 0 2417 173 1691 160 20 23 chr10 63560052 63560352 -82028936 - AluJo SINE Alu -13 299 1 416 278 30 15 chr10 63560360 63560493 -82028795 - MIR SINE MIR -108 154 20 520 288 23 28 chr10 63560558 63560735 -82028553 - MIR SINE MIR -69 193 18 265 203 54 27 chr10 63560936 63561010 -82028278 + L2 LINE L2 3191 3266 -6 1575 166 27 23 chr10 63561940 63562241 -82027047 - AluJo SINE Alu -10 302 1 45 75 0 0 chr10 63562342 63562436 -82026852 + AT_rich Low_complexity Low_complexity 1 94 0 291 325 101 12 chr10 63562476 63562645 -82026643 - LTR33 LTR ERVL -8 513 330 405 281 67 24 chr10 63562750 63562914 -82026374 - LTR33 LTR ERVL -328 193 23 442 228 364 0 chr10 63562946 63563108 -82026180 - MIR SINE MIR -36 226 6 714 202 0 0 chr10 63563141 63563250 -82026038 + FLAM_A SINE Alu 2 110 -32 180 0 0 0 chr10 63563260 63563280 -82026008 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 1078 134 0 17 chr10 63563585 63563757 -82025531 + AluSg/x SINE Alu 135 303 -9 209 261 43 54 chr10 63563916 63564008 -82025280 - L2 LINE L2 -294 2978 2888 369 336 103 14 chr10 63564440 63564586 -82024702 - L2 LINE L2 -558 2756 2598 220 300 57 29 chr10 63565555 63565625 -82023663 - L3 LINE CR1 -12 1565 1494 196 315 0 0 chr10 63565613 63565667 -82023621 - MIR3 SINE MIR -54 154 101 * 598 247 170 0 chr10 63565675 63565869 -82023419 + MIR SINE MIR 9 235 -27 197 283 83 17 chr10 63566684 63566744 -82022544 + L2 LINE L2 3250 3313 0 2872 134 76 71 chr10 63567105 63567739 -82021549 + L1MB7 LINE L1 5548 6184 0 207 69 0 0 chr10 63567802 63567831 -82021457 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 6114 126 33 7 chr10 63567831 63568132 -82021156 - L1PB1 LINE L1 -44 6107 5815 342 0 0 0 chr10 63568132 63568170 -82021118 + (TG)n Simple_repeat Simple_repeat 2 39 0 6114 126 33 7 chr10 63568170 63569406 -82019882 - L1PB1 LINE L1 -336 5815 4525 280 82 0 41 chr10 63569417 63569466 -82019822 + L1MB8 LINE L1 6132 6178 0 2204 117 0 13 chr10 63569700 63570007 -82019281 + AluSx SINE Alu 1 303 -9 2170 134 63 0 chr10 63570196 63570531 -82018757 - THE1B LTR MaLR -8 356 1 761 318 75 24 chr10 63570557 63570928 -82018360 + L2 LINE L2 2922 3311 -2 26 30 0 0 chr10 63571668 63571701 -82017587 + AT_rich Low_complexity Low_complexity 1 33 0 3856 97 6 14 chr10 63571814 63572329 -82016959 - MER9 LTR ERVK 0 511 1 284 274 84 130 chr10 63572604 63572819 -82016469 + MIR SINE MIR 18 222 -40 832 161 0 14 chr10 63573284 63573427 -82015861 - LTR2B LTR ERV1 0 490 350 772 236 27 73 chr10 63573423 63573682 -82015606 - LTR2 LTR ERV1 -202 247 1 * 38911 64 6 7 chr10 63573682 63578778 -82010510 - Harlequin LTR ERV1 0 6896 1807 7281 118 15 59 chr10 63578766 63580371 -82008917 - Harlequin LTR ERV1 -5474 1422 1 * 1948 190 68 32 chr10 63580371 63580814 -82008474 - LTR2B LTR ERV1 0 490 32 308 202 60 60 chr10 63580938 63581022 -82008266 - MIR SINE MIR -60 148 65 261 279 200 14 chr10 63581065 63581205 -82008083 - MER5A DNA MER1_type -6 183 18 309 308 103 0 chr10 63581294 63581411 -82007877 + L2 LINE L2 3143 3271 -1 491 264 239 0 chr10 63581773 63581970 -82007318 - MIR SINE MIR -17 245 2 394 248 58 44 chr10 63582738 63582875 -82006413 + MIR SINE MIR 53 191 -71 198 0 0 0 chr10 63583262 63583284 -82006004 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 1579 166 0 50 chr10 63583287 63583588 -82005700 - AluJb SINE Alu -26 286 1 2333 100 0 10 chr10 63585620 63585930 -82003358 + AluSg SINE Alu 1 307 -3 2032 150 23 48 chr10 63586057 63586410 -82002878 + MER2 DNA MER2_type 1 344 0 5483 114 49 74 chr10 63586521 63586592 -82002696 + Tigger3b DNA MER2_type 1 72 -2956 2321 95 0 0 chr10 63586592 63586886 -82002402 + AluSg1 SINE Alu 1 294 -15 5483 114 49 74 chr10 63586886 63587563 -82001725 + Tigger3b DNA MER2_type 72 720 -2308 2051 137 3 6 chr10 63587563 63587876 -82001412 - AluSx SINE Alu 0 312 1 5483 114 49 74 chr10 63587876 63588131 -82001157 + Tigger3b DNA MER2_type 720 980 -251 1432 165 8 27 chr10 63588131 63588153 -82001135 - AluJo SINE Alu 0 312 291 1850 178 0 10 chr10 63588153 63588462 -82000826 - AluJb SINE Alu -6 306 1 1432 165 8 27 chr10 63588462 63588700 -82000588 - AluJo SINE Alu -21 291 57 400 235 108 10 chr10 63588701 63588803 -82000485 - FRAM SINE Alu -60 116 5 636 259 134 9 chr10 63588843 63589075 -82000213 + L1ME4a LINE L1 5615 5875 -295 435 23 46 46 chr10 63589426 63589513 -81999775 + (TTCC)n Simple_repeat Simple_repeat 2 88 0 1631 181 17 7 chr10 63589521 63589808 -81999480 - AluJo SINE Alu -22 290 1 266 207 11 103 chr10 63589864 63589951 -81999337 + L1ME4a LINE L1 5968 6046 -75 9754 64 10 79 chr10 63590443 63591887 -81997401 + SVA Other Other 26 1369 -17 206 81 27 0 chr10 63591892 63591929 -81997359 + (TAAAA)n Simple_repeat Simple_repeat 2 39 0 203 167 0 0 chr10 63592675 63592717 -81996571 + A-rich Low_complexity Low_complexity 1 42 0 23 33 0 0 chr10 63592930 63592960 -81996328 + AT_rich Low_complexity Low_complexity 1 30 0 303 167 19 0 chr10 63593101 63593155 -81996133 - MIR SINE MIR -1 261 207 2124 89 0 25 chr10 63593597 63593878 -81995410 - AluSp SINE Alu -39 274 1 23 0 0 0 chr10 63593888 63593911 -81995377 + AT_rich Low_complexity Low_complexity 1 23 0 683 240 124 9 chr10 63594043 63594268 -81995020 + MIR SINE MIR 10 260 -2 236 303 156 55 chr10 63594361 63594599 -81994689 + L2 LINE L2 2992 3253 -19 21 0 0 0 chr10 63594711 63594732 -81994556 + AT_rich Low_complexity Low_complexity 1 21 0 327 271 113 45 chr10 63595404 63595537 -81993751 - MIR3 SINE MIR -28 180 39 357 280 96 28 chr10 63595767 63595939 -81993349 + MIR SINE MIR 4 185 -58 426 297 57 24 chr10 63595954 63596163 -81993125 - MIR SINE MIR -45 217 2 1940 124 60 17 chr10 63596190 63596489 -81992799 + AluSx SINE Alu 1 312 0 2449 85 7 0 chr10 63596841 63597148 -81992140 - AluSq SINE Alu -4 309 1 380 309 17 29 chr10 63597811 63597986 -81991302 - MARNA DNA Mariner -169 417 245 188 347 0 0 chr10 63598020 63598069 -81991219 + L2 LINE L2 3203 3251 -21 2014 112 10 35 chr10 63598157 63598469 -81990819 + AluJb SINE Alu 1 304 -8 193 200 0 44 chr10 63598538 63598583 -81990705 + L2 LINE L2 3257 3299 -14 472 229 8 33 chr10 63599190 63599312 -81989976 - MIR SINE MIR -109 153 35 180 97 0 0 chr10 63600097 63600128 -81989160 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 1485 81 0 20 chr10 63600469 63600667 -81988621 + L1PA6 LINE L1 5961 6154 0 1811 168 0 10 chr10 63601198 63601501 -81987787 + AluJb SINE Alu 1 300 -12 1477 181 51 34 chr10 63601550 63601843 -81987445 - AluJo SINE Alu -14 298 1 409 168 70 60 chr10 63602110 63602321 -81986967 - Charlie7 DNA MER1_type -40 2572 8 1849 201 45 14 chr10 63602365 63602787 -81986501 + MLT1C LTR MaLR 1 435 -32 405 200 29 71 chr10 63602820 63602990 -81986298 + MER31-int LTR ERV1 1287 1449 -3487 444 236 52 35 chr10 63603154 63603328 -81985960 + MER31-int LTR ERV1 1679 1855 -3081 656 239 32 78 chr10 63603543 63604053 -81985235 + MER31-int LTR ERV1 2211 2686 -2250 2648 189 76 144 chr10 63604067 63605254 -81984034 + MER31-int LTR ERV1 3120 4386 -550 1528 151 159 8 chr10 63605254 63605443 -81983845 - AluJo SINE Alu 0 321 162 2174 94 0 58 chr10 63605443 63605510 -81983778 - AluY SINE Alu 0 311 242 230 0 33 0 chr10 63605510 63605540 -81983748 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2174 94 0 58 chr10 63605540 63605802 -81983486 - AluY SINE Alu -69 242 1 1528 151 159 8 chr10 63605802 63605895 -81983393 - AluJo SINE Alu -159 162 1 2648 189 76 144 chr10 63605895 63605925 -81983363 + MER31-int LTR ERV1 4385 4247 -689 457 194 79 65 chr10 63605928 63606067 -81983221 + LTR37A LTR ERV1 1 141 -285 3725 122 4 4 chr10 63606724 63607234 -81982054 + MER9 LTR ERVK 1 510 -1 2320 123 32 56 chr10 63607446 63607494 -81981794 - L1MB2 LINE L1 -2 6169 6121 2105 118 6 41 chr10 63607494 63607808 -81981480 - AluSx SINE Alu -9 303 1 2320 123 32 56 chr10 63607808 63608191 -81981097 - L1MB2 LINE L1 -50 6121 5748 1821 194 45 3 chr10 63608191 63608546 -81980742 + MER92B LTR ERV1 1 370 -266 496 208 50 0 chr10 63608571 63608691 -81980597 + MER92B LTR ERV1 510 635 -1 2370 91 0 13 chr10 63608774 63609072 -81980216 - AluSx SINE Alu -18 294 1 256 352 33 0 chr10 63609086 63609177 -81980111 - MIR SINE MIR -113 149 56 2000 188 154 26 chr10 63609353 63609847 -81979441 - MER89 LTR ERV1 0 559 3 1785 136 7 4 chr10 63610089 63610361 -81978927 - AluJb SINE Alu -6 306 34 314 335 20 70 chr10 63610621 63610821 -81978467 + L2 LINE L2 2926 3115 -157 726 256 19 0 chr10 63611234 63611390 -81977898 + MIR SINE MIR 58 216 -46 2244 69 14 0 chr10 63611454 63611755 -81977533 - AluY SINE Alu 0 309 5 2006 116 0 0 chr10 63611815 63612092 -81977196 - MER9 LTR ERVK -234 277 1 22434 63 2 0 chr10 63612092 63614816 -81974472 - Harlequin LTR ERV1 -905 5991 3263 716 90 20 0 chr10 63614812 63614912 -81974376 + Harlequin LTR ERV1 4429 4530 -2366 * 10740 76 25 10 chr10 63614874 63616091 -81973197 - Harlequin LTR ERV1 -3608 3288 2044 225 65 0 0 chr10 63616091 63616122 -81973166 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 10740 76 25 10 chr10 63616122 63616364 -81972924 - Harlequin LTR ERV1 -4852 2044 1807 4929 132 62 43 chr10 63616348 63617813 -81971475 - Harlequin LTR ERV1 -3668 4117 1 * 2046 180 105 31 chr10 63617813 63618269 -81971019 - LTR2B LTR ERV1 0 490 1 200 274 0 0 chr10 63618293 63618344 -81970944 - L2 LINE L2 -12 3260 3210 198 312 65 21 chr10 63618349 63618442 -81970846 - MIR SINE MIR -93 115 19 217 304 194 55 chr10 63619673 63619874 -81969414 - MIR SINE MIR 0 262 34 23 0 0 0 chr10 63619923 63619946 -81969342 + AT_rich Low_complexity Low_complexity 1 23 0 2350 120 3 43 chr10 63620144 63620494 -81968794 + MER1B DNA MER1_type 1 336 -1 2080 109 16 20 chr10 63621516 63621819 -81967469 + AluSx SINE Alu 1 302 -10 252 0 0 0 chr10 63621835 63621863 -81967425 + (TC)n Simple_repeat Simple_repeat 1 28 0 * 396 0 0 0 chr10 63621862 63621906 -81967382 + (CA)n Simple_repeat Simple_repeat 1 44 0 3128 105 12 0 chr10 63622522 63622941 -81966347 + L1PA13 LINE L1 5737 6160 -3 520 270 33 33 chr10 63622979 63623190 -81966098 - L1MC5 LINE L1 -44 7917 7707 2379 88 73 32 chr10 63623374 63623715 -81965573 - THE1A LTR MaLR 0 355 1 12758 87 1 5 chr10 63623715 63625298 -81963990 - THE1A-int LTR MaLR 0 1580 4 2877 90 3 0 chr10 63625301 63625655 -81963633 - THE1A LTR MaLR 0 355 1 1689 196 3 0 chr10 63625907 63626203 -81963085 + AluJb SINE Alu 1 297 -15 283 188 35 47 chr10 63626224 63626309 -81962979 - L1MC5 LINE L1 -269 7692 7609 405 248 129 0 chr10 63626616 63626717 -81962571 + MIR SINE MIR 13 126 -136 548 235 22 0 chr10 63627267 63627403 -81961885 - MER63B DNA MER1_type 0 434 296 1201 223 33 60 chr10 63627403 63627714 -81961574 - MER63B DNA MER1_type -699 363 45 2095 102 3 7 chr10 63627714 63627999 -81961289 + AluSg SINE Alu 2 285 -25 414 0 0 0 chr10 63628005 63628051 -81961237 + (TAAA)n Simple_repeat Simple_repeat 4 49 0 1201 223 33 60 chr10 63628051 63628099 -81961189 - MER63B DNA MER1_type -1022 40 7 321 279 81 22 chr10 63628472 63628608 -81960680 - Charlie8 DNA MER1_type -2199 218 75 2420 86 3 0 chr10 63628608 63628910 -81960378 + AluSp SINE Alu 1 303 -10 506 299 126 26 chr10 63629156 63629427 -81959861 + LTR16C LTR ERVL 164 461 -30 193 354 24 24 chr10 63629618 63629700 -81959588 + L2 LINE L2 3164 3245 -27 12492 30 0 1 chr10 63629709 63631167 -81958121 - L1P LINE L1 -896 5250 3794 4850 18 0 0 chr10 63631165 63631710 -81957578 + L1PA2 LINE L1 5611 6155 0 * 1438 217 43 15 chr10 63631950 63632277 -81957011 + MLT1E3 LTR MaLR 289 624 0 658 199 29 0 chr10 63633113 63633249 -81956039 - Ricksha DNA DNA -1905 141 2 6436 131 55 8 chr10 63633251 63634301 -81954987 + Tigger1 DNA MER2_type 379 1478 -940 1419 156 23 23 chr10 63634318 63634619 -81954669 - AluSx SINE Alu -2 310 10 276 234 106 21 chr10 63634767 63634861 -81954427 - L1M4 LINE L1 -1931 4215 4114 665 137 0 0 chr10 63635195 63635290 -81953998 - MLT2B3 LTR ERVL -94 460 366 21 57 0 0 chr10 63637276 63637311 -81951977 + AT_rich Low_complexity Low_complexity 1 35 0 454 281 108 5 chr10 63637483 63637668 -81951620 - MIR SINE MIR -2 260 57 985 150 135 26 chr10 63637681 63638002 -81951286 + THE1C LTR MaLR 1 355 -9 194 314 0 0 chr10 63638227 63638278 -81951010 - MIR SINE MIR -102 160 110 3591 30 0 0 chr10 63638512 63638909 -81950379 - L1PA4 LINE L1 -6 6149 5753 1774 154 14 14 chr10 63638915 63639201 -81950087 - AluJo SINE Alu -21 291 6 344 272 70 6 chr10 63639295 63639453 -81949835 - L1MEc LINE L1 -5328 1068 901 22 35 0 0 chr10 63639971 63640000 -81949288 + AT_rich Low_complexity Low_complexity 1 29 0 1868 103 50 21 chr10 63640387 63640669 -81948619 + AluSx SINE Alu 17 306 -6 279 303 202 0 chr10 63640944 63641053 -81948235 - MIR SINE MIR -115 147 17 511 233 0 8 chr10 63641205 63641325 -81947963 - L1ME3A LINE L1 -7 6163 6045 2061 132 7 16 chr10 63641326 63641629 -81947659 + AluSx SINE Alu 1 300 -12 1028 167 0 6 chr10 63641662 63641818 -81947470 - FRAM SINE Alu -10 156 2 240 211 0 0 chr10 63642622 63642679 -81946609 + A-rich Low_complexity Low_complexity 1 57 0 21 0 0 0 chr10 63644393 63644414 -81944874 + AT_rich Low_complexity Low_complexity 1 21 0 1894 139 31 0 chr10 63646691 63646979 -81942309 + AluSx SINE Alu 1 297 -15 21 0 0 0 chr10 63647062 63647083 -81942205 + AT_rich Low_complexity Low_complexity 1 21 0 2887 181 11 28 chr10 63647962 63648634 -81940654 + L1MB1 LINE L1 4804 5468 -700 224 89 0 22 chr10 63648635 63648680 -81940608 + (TTA)n Simple_repeat Simple_repeat 3 46 0 7901 29 20 0 chr10 63648680 63649614 -81939674 - L1PA3 LINE L1 -18 6137 5203 3699 144 73 18 chr10 63649614 63649875 -81939413 + L1MB1 LINE L1 5472 5717 -451 2416 73 0 13 chr10 63649875 63650178 -81939110 + AluY SINE Alu 1 299 -12 3699 144 73 18 chr10 63650178 63650574 -81938714 + L1MB1 LINE L1 5717 6165 -3 270 0 0 0 chr10 63650778 63650808 -81938480 + (A)n Simple_repeat Simple_repeat 1 30 0 214 250 0 0 chr10 63650814 63650870 -81938418 + GA-rich Low_complexity Low_complexity 2 57 0 243 0 0 0 chr10 63650873 63650900 -81938388 + (TG)n Simple_repeat Simple_repeat 2 28 0 187 304 18 0 chr10 63651272 63651328 -81937960 + L2 LINE L2 3185 3241 -31 2271 109 7 3 chr10 63651902 63652206 -81937082 + AluSg SINE Alu 1 305 -5 1966 122 31 14 chr10 63652338 63652626 -81936662 + AluSx SINE Alu 1 293 -19 215 220 20 40 chr10 63652728 63652778 -81936510 + MER5B DNA MER1_type 68 116 -62 681 269 85 5 chr10 63652936 63653159 -81936129 + MIR SINE MIR 20 260 -2 1342 243 46 64 chr10 63653251 63653753 -81935535 - L1MD1 LINE L1 -5 6237 5745 539 340 84 8 chr10 63654500 63654762 -81934526 + L2 LINE L2 1830 2111 -1203 1655 198 89 40 chr10 63654769 63655218 -81934070 - L1MC3 LINE L1 -629 7156 6686 333 250 141 16 chr10 63657101 63657229 -81932059 + MIR SINE MIR 60 203 -59 2121 133 3 0 chr10 63660392 63660694 -81928594 + AluSx SINE Alu 1 303 -9 864 144 28 38 chr10 63662875 63663075 -81926213 + MER6 DNA MER2_type -64 865 0 436 311 30 19 chr10 63663131 63663318 -81925970 + MER5B DNA MER1_type 3 178 0 23 0 0 0 chr10 63663869 63663892 -81925396 + AT_rich Low_complexity Low_complexity 1 23 0 2520 165 78 11 chr10 63663930 63664403 -81924885 + MLT1D LTR MaLR 1 505 0 626 280 104 21 chr10 63664522 63664801 -81924487 + L1MC4a LINE L1 5600 5901 -1907 757 228 0 0 chr10 63664842 63664978 -81924310 + MER8 DNA MER2_type 42 177 -62 487 105 0 40 chr10 63665011 63665087 -81924201 - Tigger2 DNA MER2_type -2645 73 1 180 0 0 0 chr10 63665252 63665272 -81924016 + (A)n Simple_repeat Simple_repeat 1 20 0 252 205 51 26 chr10 63666596 63666674 -81922614 + MER116 DNA Mariner 1 80 0 216 0 0 0 chr10 63667789 63667813 -81921475 + (CA)n Simple_repeat Simple_repeat 2 25 0 363 267 73 63 chr10 63668589 63668795 -81920493 - L2 LINE L2 -8 3305 3098 24 0 0 0 chr10 63668862 63668886 -81920402 + AT_rich Low_complexity Low_complexity 1 24 0 571 313 70 9 chr10 63669661 63669891 -81919397 + MIR SINE MIR 18 261 -1 363 280 40 69 chr10 63669865 63670040 -81919248 + L2 LINE L2 3128 3297 -16 * 1964 149 7 0 chr10 63670372 63670668 -81918620 - AluJo SINE Alu -14 298 1 386 297 29 14 chr10 63670909 63671047 -81918241 + MIR3 SINE MIR 61 200 -8 4743 169 62 7 chr10 63671640 63672460 -81916828 + MER6 DNA MER2_type 1 865 0 1270 177 0 5 chr10 63673740 63673993 -81915295 + AluJo SINE Alu 87 338 0 24 0 0 0 chr10 63674044 63674068 -81915220 + AT_rich Low_complexity Low_complexity 1 24 0 247 228 110 41 chr10 63674980 63675125 -81914163 + L1ME4a LINE L1 5966 6120 -1 651 202 0 0 chr10 63675803 63675907 -81913381 + FLAM_A SINE Alu 1 104 -38 2001 195 172 69 chr10 63675910 63676724 -81912564 + LTR28 LTR ERV1 7 1020 0 238 283 0 0 chr10 63677847 63677900 -81911388 + polypurine Low_complexity Low_complexity 2 54 0 2052 142 24 48 chr10 63678325 63678698 -81910590 + THE1B LTR MaLR 1 364 0 184 269 183 0 chr10 63680266 63680370 -81908918 - L2 LINE L2 -233 3039 2917 489 227 106 53 chr10 63680391 63680598 -81908690 - MER112 DNA MER1_type -11 249 32 213 308 0 65 chr10 63680681 63680788 -81908500 - MIR SINE MIR -116 146 47 201 297 81 0 chr10 63681797 63681871 -81907417 + MIR SINE MIR 66 145 -117 2851 157 57 13 chr10 63682572 63683119 -81906169 + L1MB8 LINE L1 5607 6177 -1 314 333 24 16 chr10 63685124 63685247 -81904041 - MIR3 SINE MIR -49 159 36 2125 140 0 0 chr10 63686356 63686649 -81902639 + AluSq SINE Alu 1 293 -20 1960 97 58 55 chr10 63687440 63687566 -81901722 + AluSx SINE Alu 1 125 -187 225 94 0 0 chr10 63687566 63687598 -81901690 + (CAAA)n Simple_repeat Simple_repeat 4 35 0 1960 97 58 55 chr10 63687598 63687781 -81901507 + AluSx SINE Alu 125 311 -1 1810 157 20 7 chr10 63688965 63689264 -81900024 + AluJo SINE Alu 1 303 -9 2372 93 3 6 chr10 63690652 63690964 -81898324 + AluSq SINE Alu 1 311 -2 193 339 177 19 chr10 63691457 63691717 -81897571 + L2 LINE L2 2567 2867 -447 231 378 42 17 chr10 63692315 63692434 -81896854 - MIR SINE MIR -65 143 22 697 297 83 14 chr10 63692927 63693012 -81896276 - L1ME3A LINE L1 -339 5814 5736 2207 110 3 0 chr10 63693012 63693313 -81895975 - AluSg SINE Alu -8 302 1 697 297 83 14 chr10 63693313 63693517 -81895771 - L1ME3A LINE L1 -417 5736 5505 247 211 248 8 chr10 63693524 63693657 -81895631 - L1ME3A LINE L1 -802 5327 5163 2074 282 76 18 chr10 63693659 63694578 -81894710 + L2 LINE L2 2149 3135 -178 1247 233 131 68 chr10 63694599 63694852 -81894436 - L1ME3A LINE L1 -1769 4360 4125 2353 79 10 0 chr10 63694852 63695155 -81894133 - AluY SINE Alu -5 306 1 1247 233 131 68 chr10 63695155 63695237 -81894051 - L1ME3A LINE L1 -2004 4125 4050 2009 134 3 17 chr10 63695237 63695536 -81893752 - AluSx SINE Alu -17 295 1 1247 233 131 68 chr10 63695536 63695937 -81893351 - L1ME3A LINE L1 -2079 4050 3576 2476 80 0 0 chr10 63695940 63696242 -81893046 - AluY SINE Alu -9 302 1 1157 45 0 0 chr10 63696243 63696375 -81892913 - AluY SINE Alu -179 132 1 474 318 58 12 chr10 63696385 63696643 -81892645 - L1ME3A LINE L1 -2572 3557 3288 275 354 55 24 chr10 63696677 63696931 -81892357 - L1ME3A LINE L1 -5266 853 592 1486 109 95 78 chr10 63697659 63697953 -81891335 + AluSx SINE Alu 2 300 -12 207 0 0 0 chr10 63698536 63698559 -81890729 + (T)n Simple_repeat Simple_repeat 1 23 0 2354 71 0 3 chr10 63700247 63700542 -81888746 - AluY SINE Alu -17 294 1 216 0 0 0 chr10 63701007 63701031 -81888257 + (T)n Simple_repeat Simple_repeat 1 24 0 2745 184 34 26 chr10 63701052 63701586 -81887702 + MER6A DNA MER2_type 1 538 -67 1330 128 6 0 chr10 63701586 63701766 -81887522 + AluSq SINE Alu 1 181 -132 314 159 191 0 chr10 63701766 63701829 -81887459 + AluS SINE Alu 225 299 -2 * 494 185 0 0 chr10 63701821 63701902 -81887386 + MER6A DNA MER2_type 525 605 0 2100 122 0 7 chr10 63701911 63702205 -81887083 - AluSx SINE Alu -20 292 1 1064 155 55 0 chr10 63703378 63703559 -81885729 + L1MB3 LINE L1 5990 6180 -3 216 0 0 0 chr10 63704323 63704347 -81884941 + (A)n Simple_repeat Simple_repeat 1 24 0 1857 170 3 6 chr10 63706442 63706753 -81882535 + AluJb SINE Alu 1 310 -2 205 213 0 21 chr10 63708406 63708453 -81880835 + L3 LINE CR1 1338 1383 -194 2103 118 0 16 chr10 63708477 63708781 -81880507 + AluSg1 SINE Alu 1 299 -10 840 150 140 35 chr10 63708781 63708981 -81880307 + L1MB7 LINE L1 5964 6184 0 24 0 0 0 chr10 63709536 63709560 -81879728 + AT_rich Low_complexity Low_complexity 1 24 0 347 264 55 9 chr10 63711968 63712078 -81877210 - MER5C DNA MER1_type -204 120 6 430 330 57 5 chr10 63712093 63712305 -81876983 + MIR SINE MIR 27 249 -13 408 40 0 0 chr10 63712382 63712432 -81876856 + (TG)n Simple_repeat Simple_repeat 1 50 0 312 267 107 65 chr10 63712573 63713004 -81876284 + L1MEd LINE L1 785 1233 -4886 1536 156 3 62 chr10 63713004 63713292 -81875996 + AluSx SINE Alu 31 301 -11 2099 247 69 44 chr10 63713492 63713959 -81875329 + L1MCc LINE L1 788 1242 -5657 1529 181 3 62 chr10 63713959 63714104 -81875184 + AluJb SINE Alu 3 122 -190 1692 157 65 14 chr10 63714104 63714398 -81874890 + AluSx SINE Alu 1 309 -3 1529 181 3 62 chr10 63714398 63714561 -81874727 + AluJb SINE Alu 122 293 -19 2099 247 69 44 chr10 63714561 63715276 -81874012 + L1MCc LINE L1 1242 2011 -4888 1847 162 0 3 chr10 63715396 63715692 -81873596 + AluSx SINE Alu 1 295 -17 516 72 0 0 chr10 63715708 63715777 -81873511 + (CA)n Simple_repeat Simple_repeat 2 70 0 526 289 167 35 chr10 63715792 63716308 -81872980 + L1ME3A LINE L1 5322 5905 -259 855 203 136 11 chr10 63716584 63716900 -81872388 + L1MB5 LINE L1 5826 6184 0 411 182 197 27 chr10 63717778 63717919 -81871369 - MLT1H LTR MaLR -3 546 400 2307 101 3 0 chr10 63718763 63719069 -81870219 + AluSc SINE Alu 1 307 -2 277 271 79 57 chr10 63719808 63719948 -81869340 - MIR SINE MIR -117 145 3 750 191 51 25 chr10 63720275 63720402 -81868886 + LTR32 LTR ERVL 15 145 -326 4113 95 19 14 chr10 63720402 63720750 -81868538 + MER4B LTR ERV1 1 355 -255 1751 161 0 48 chr10 63720750 63721060 -81868228 - AluJb SINE Alu -17 295 1 4113 95 19 14 chr10 63721060 63721300 -81867988 + MER4B LTR ERV1 355 592 -18 662 100 0 11 chr10 63721286 63721376 -81867912 + MER4B LTR ERV1 522 610 0 * 1141 167 15 20 chr10 63721376 63721574 -81867714 + LTR32 LTR ERVL 164 360 -111 862 205 0 6 chr10 63721647 63721803 -81867485 + LTR32 LTR ERVL 317 471 0 2453 145 73 0 chr10 63721850 63722249 -81867039 + MER68 LTR ERV1 135 562 0 187 236 57 57 chr10 63722424 63722547 -81866741 + L2 LINE L2 2253 2375 -939 450 114 0 0 chr10 63722581 63722660 -81866628 + (A)n Simple_repeat Simple_repeat 1 79 0 550 298 124 39 chr10 63722667 63723134 -81866154 + L2 LINE L2 2454 2960 -354 213 333 157 9 chr10 63723280 63723388 -81865900 + L2 LINE L2 3123 3246 -26 454 311 82 41 chr10 63723718 63724085 -81865203 + MLT1J LTR MaLR 20 401 -110 28 79 0 0 chr10 63724358 63724421 -81864867 + AT_rich Low_complexity Low_complexity 1 63 0 189 0 0 0 chr10 63724667 63724688 -81864600 + (A)n Simple_repeat Simple_repeat 1 21 0 412 324 36 22 chr10 63724790 63724929 -81864359 + MIR3 SINE MIR 7 147 -61 620 237 115 55 chr10 63726089 63726342 -81862946 + MER46C DNA MER2_type 1 268 -70 1774 206 63 27 chr10 63726357 63726804 -81862484 + MLT1C LTR MaLR 3 465 -2 299 186 102 0 chr10 63726820 63726879 -81862409 + MER46C DNA MER2_type 273 337 -1 339 25 0 0 chr10 63727312 63727352 -81861936 + (CA)n Simple_repeat Simple_repeat 2 41 0 1858 202 81 57 chr10 63727746 63728217 -81861071 + MLT1D LTR MaLR 24 505 0 1986 109 88 0 chr10 63729268 63729552 -81859736 - AluSx SINE Alu -3 309 1 180 0 0 0 chr10 63729793 63729813 -81859475 + (A)n Simple_repeat Simple_repeat 1 20 0 375 323 163 12 chr10 63729851 63730035 -81859253 + L1M4 LINE L1 3689 3844 -2302 1799 173 65 0 chr10 63730035 63730359 -81858929 - MER7A DNA MER2_type 0 346 4 375 323 163 12 chr10 63730359 63730592 -81858696 + L1M4 LINE L1 3844 4169 -1977 183 216 68 40 chr10 63732272 63732346 -81856942 - MIR SINE MIR -105 157 82 1159 257 101 24 chr10 63732596 63733107 -81856181 + MER90 LTR ERV1 27 570 -5 977 217 181 4 chr10 63733587 63733864 -81855424 + L1ME3A LINE L1 5840 6165 -5 279 255 75 0 chr10 63733948 63734054 -81855234 + MIR SINE MIR 91 204 -58 190 174 20 51 chr10 63735175 63735273 -81854015 + GA-rich Low_complexity Low_complexity 2 96 0 255 128 0 113 chr10 63735283 63735478 -81853810 + (GGAAA)n Simple_repeat Simple_repeat 4 176 0 247 353 0 33 chr10 63735480 63735602 -81853686 + G-rich Low_complexity Low_complexity 3 120 0 2254 92 0 0 chr10 63735639 63735931 -81853357 + AluY SINE Alu 1 292 -19 323 306 83 71 chr10 63737331 63737655 -81851633 + L1MC4a LINE L1 5589 5916 -1892 2210 129 0 0 chr10 63737743 63738054 -81851234 + AluSx SINE Alu 1 311 -1 215 136 45 0 chr10 63738056 63738100 -81851188 + GA-rich Low_complexity Low_complexity 3 48 0 617 297 108 12 chr10 63739740 63740073 -81849215 + L1MC4a LINE L1 5283 5647 -2161 498 272 42 42 chr10 63740104 63740295 -81848993 + MIR SINE MIR 31 221 -41 406 241 218 35 chr10 63740296 63740553 -81848735 + L1MC4a LINE L1 5635 5938 -1870 24 32 0 0 chr10 63740582 63740613 -81848675 + AT_rich Low_complexity Low_complexity 1 31 0 212 300 71 41 chr10 63740824 63740994 -81848294 + MIR SINE MIR 23 197 -65 240 176 141 35 chr10 63741629 63741714 -81847574 + L1MC5 LINE L1 7647 7740 -221 206 286 41 31 chr10 63742301 63742399 -81846889 + L2 LINE L2 2872 2970 -302 459 235 91 48 chr10 63742532 63742935 -81846353 + LTR33A LTR ERVL 2 469 -54 203 244 67 11 chr10 63743564 63743654 -81845634 - MIR SINE MIR -102 160 66 23 33 0 0 chr10 63743664 63743694 -81845594 + AT_rich Low_complexity Low_complexity 1 30 0 2266 43 0 7 chr10 63743694 63743970 -81845318 - L1PA5 LINE L1 0 6154 5881 962 198 11 0 chr10 63744008 63744195 -81845093 - MER53 DNA DNA 0 189 1 825 217 33 52 chr10 63745945 63746274 -81843014 + L1ME3A LINE L1 5783 6108 -58 1636 162 3 27 chr10 63746274 63746570 -81842718 + AluJb SINE Alu 1 289 -23 261 0 0 0 chr10 63746573 63746602 -81842686 + (CATA)n Simple_repeat Simple_repeat 2 30 0 319 323 132 0 chr10 63746810 63746977 -81842311 + MIR SINE MIR 38 226 -36 231 122 122 0 chr10 63747468 63747509 -81841779 + L2 LINE L2 3218 3263 -9 1680 172 14 14 chr10 63747952 63748242 -81841046 + AluJo SINE Alu 1 290 -22 646 265 45 47 chr10 63748292 63748532 -81840756 + MIR SINE MIR 27 261 -1 1710 230 60 39 chr10 63748638 63749103 -81840185 + MER77 LTR ERV1 57 531 -74 21 0 0 0 chr10 63749175 63749196 -81840092 + AT_rich Low_complexity Low_complexity 1 21 0 241 43 43 43 chr10 63749522 63749569 -81839719 + (CAAAAA)n Simple_repeat Simple_repeat 2 48 0 1239 105 38 10 chr10 63749584 63749793 -81839495 + L1MB4 LINE L1 5966 6180 0 2480 70 0 7 chr10 63750189 63750488 -81838800 - AluSp SINE Alu -16 297 1 1764 146 8 4 chr10 63753709 63753977 -81835311 + AluSx SINE Alu 1 269 -43 4591 146 67 22 chr10 63755236 63755322 -81833966 + L1MC1 LINE L1 5431 5512 -821 2234 97 0 19 chr10 63755322 63755630 -81833658 - AluSx SINE Alu -10 302 1 4591 146 67 22 chr10 63755630 63756407 -81832881 + L1MC1 LINE L1 5512 6333 0 234 105 0 0 chr10 63759225 63759263 -81830025 + (CCG)n Simple_repeat Simple_repeat 2 39 0 21 0 0 0 chr10 63762249 63762270 -81827018 + AT_rich Low_complexity Low_complexity 1 21 0 656 157 0 95 chr10 63762474 63762621 -81826667 - FLAM_C SINE Alu 0 133 1 1081 156 94 6 chr10 63762719 63762899 -81826389 - MER20 DNA MER1_type -23 196 1 2230 118 0 9 chr10 63763076 63763391 -81825897 - AluSx SINE Alu 0 312 1 499 86 43 0 chr10 63763671 63763741 -81825547 - AluS SINE Alu -239 74 2 365 239 119 15 chr10 63763970 63764104 -81825184 + L1MC4a LINE L1 5697 5844 -1964 185 216 0 59 chr10 63764112 63764163 -81825125 + L2 LINE L2 2949 2996 -317 257 256 75 68 chr10 63764312 63764445 -81824843 + L2 LINE L2 3180 3313 0 1486 177 45 0 chr10 63764891 63765157 -81824131 + AluJo SINE Alu 20 297 -15 804 264 39 0 chr10 63765252 63765460 -81823828 - MER58A DNA MER1_type 0 224 9 525 265 103 27 chr10 63766184 63766369 -81822919 - L2 LINE L2 -1 3312 3114 538 212 201 0 chr10 63766617 63766806 -81822482 - MIR SINE MIR -28 234 8 1705 110 0 46 chr10 63766981 63767244 -81822044 + AluSx SINE Alu 27 277 -35 1940 112 0 25 chr10 63767423 63767699 -81821589 + AluSg SINE Alu 33 301 -9 232 162 0 0 chr10 63767699 63767736 -81821552 - Alu SINE Alu -262 37 1 496 292 30 6 chr10 63767813 63767981 -81821307 + MIR SINE MIR 78 249 -13 1276 108 11 0 chr10 63768663 63768839 -81820449 - AluSq SINE Alu -48 265 88 1162 195 9 4 chr10 63768850 63769076 -81820212 - AluJb SINE Alu -52 260 34 374 274 97 22 chr10 63769239 63769492 -81819796 - L1ME2 LINE L1 -10 6154 5881 467 269 64 13 chr10 63769971 63770127 -81819161 + Charlie8 DNA MER1_type 54 217 -2200 852 213 75 13 chr10 63771617 63771856 -81817432 + L1MC4a LINE L1 5693 5946 -1862 3938 214 45 6 chr10 63772774 63773765 -81815523 + L1 LINE L1 2849 3878 -2268 321 159 63 0 chr10 63773768 63773831 -81815457 - Zaphod DNA AcHobo -141 3890 3824 279 85 178 0 chr10 63773963 63774025 -81815263 + Alu SINE Alu 246 302 0 792 91 33 8 chr10 63774172 63774293 -81814995 - L1MA8 LINE L1 -3 6288 6165 188 403 16 8 chr10 63774298 63774427 -81814861 - MIR SINE MIR -61 147 18 294 121 224 0 chr10 63774767 63774825 -81814463 + THE1C LTR MaLR 1 71 -304 2815 60 14 6 chr10 63774853 63775205 -81814083 + THE1C LTR MaLR 21 375 0 500 247 217 18 chr10 63775692 63775822 -81813466 - Zaphod DNA AcHobo -3789 242 71 432 0 0 0 chr10 63775822 63775870 -81813418 + (TG)n Simple_repeat Simple_repeat 2 49 0 500 247 217 18 chr10 63775870 63775905 -81813383 - Zaphod DNA AcHobo -3960 71 44 552 281 126 9 chr10 63777512 63777743 -81811545 + L1M4 LINE L1 3712 3969 -2177 2130 141 0 0 chr10 63777918 63778223 -81811065 - AluSq SINE Alu -8 305 1 310 306 35 41 chr10 63778226 63778396 -81810892 - L1MC4a LINE L1 -1871 5937 5769 287 299 55 8 chr10 63778920 63779047 -81810241 + MIR SINE MIR 56 188 -74 924 122 8 0 chr10 63779738 63779869 -81809419 - AluSq/x SINE Alu -180 132 1 579 246 125 26 chr10 63780012 63780244 -81809044 - MIR SINE MIR 0 262 8 272 348 58 7 chr10 63780461 63780599 -81808689 + MIR SINE MIR 73 217 -45 2036 101 3 21 chr10 63780873 63781161 -81808127 - AluSc SINE Alu -26 283 1 765 266 78 12 chr10 63781201 63781445 -81807843 - LTR16B LTR ERVL 0 464 205 4066 165 23 6 chr10 63781605 63782288 -81807000 + L1MC1 LINE L1 5634 6328 -5 1999 117 41 3 chr10 63782427 63782717 -81806571 + AluSc SINE Alu 1 301 -8 526 256 41 89 chr10 63782857 63783103 -81806185 + L1M4 LINE L1 2857 3090 -3056 399 213 53 11 chr10 63783235 63783329 -81805959 - MIR SINE MIR -111 151 54 347 257 121 19 chr10 63783315 63783489 -81805799 - MIR SINE MIR -67 195 4 * 351 65 0 0 chr10 63785435 63785481 -81803807 + (T)n Simple_repeat Simple_repeat 1 46 0 623 115 6 176 chr10 63785693 63785722 -81803566 + LTR45B LTR ERV1 3 35 -454 2456 71 0 0 chr10 63785722 63786017 -81803271 - AluY SINE Alu -16 295 1 623 115 6 176 chr10 63786017 63786169 -81803119 + LTR45B LTR ERV1 35 153 -336 2290 90 3 10 chr10 63786362 63786662 -81802626 - AluY SINE Alu -13 298 1 2232 119 0 3 chr10 63786712 63787023 -81802265 - AluSg SINE Alu 0 310 1 326 94 0 158 chr10 63787505 63787676 -81801612 - AluSp/q SINE Alu -2 301 158 402 88 0 124 chr10 63787761 63787874 -81801414 - AluS SINE Alu -213 99 1 559 221 210 75 chr10 63788208 63788281 -81801007 + MSTD LTR MaLR 1 63 -333 2223 92 7 3 chr10 63788281 63788576 -81800712 + AluSg1 SINE Alu 1 296 -13 559 221 210 75 chr10 63788576 63788783 -81800505 + MSTD LTR MaLR 63 319 -77 537 88 0 0 chr10 63789246 63789314 -81799974 - Alu SINE Alu -241 69 2 186 217 17 33 chr10 63789841 63789901 -81799387 + L3 LINE CR1 634 692 -885 216 0 0 0 chr10 63790262 63790286 -81799002 + (T)n Simple_repeat Simple_repeat 1 24 0 1004 169 6 17 chr10 63790762 63790934 -81798354 - AluJo SINE Alu -142 170 1 1366 214 28 70 chr10 63790940 63791399 -81797889 - L1MC5 LINE L1 -818 7143 6704 500 223 27 0 chr10 63791603 63791715 -81797573 + MIR SINE MIR 54 168 -94 213 191 24 0 chr10 63791874 63791916 -81797372 - MIR SINE MIR -112 150 108 246 208 0 0 chr10 63792015 63792068 -81797220 - MLT1J LTR MaLR -33 478 426 2116 104 0 0 chr10 63792257 63792558 -81796730 - AluSc SINE Alu 0 301 1 201 133 0 0 chr10 63793184 63793214 -81796074 - MIR SINE MIR -118 90 61 225 319 44 0 chr10 63793686 63793777 -81795511 + MIR SINE MIR 168 262 0 230 304 19 42 chr10 63793803 63793914 -81795374 + MER5B DNA MER1_type 20 138 -51 2331 164 76 9 chr10 63794170 63794602 -81794686 - LOR1b LTR ERV1 0 461 1 955 160 9 71 chr10 63794918 63794999 -81794289 - MER2 DNA MER2_type -5 340 256 2365 92 0 0 chr10 63794999 63795292 -81793996 + AluSx SINE Alu 1 293 -19 955 160 9 71 chr10 63795292 63795422 -81793866 - MER2 DNA MER2_type -89 256 142 632 218 18 42 chr10 63795422 63795587 -81793701 - AluSg/x SINE Alu -22 288 128 280 355 0 0 chr10 63795620 63795761 -81793527 + T-rich Low_complexity Low_complexity 1 141 0 234 342 0 54 chr10 63795752 63795936 -81793352 + C-rich Low_complexity Low_complexity 3 176 0 * 307 344 0 31 chr10 63795863 63796026 -81793262 + CT-rich Low_complexity Low_complexity 5 162 0 2359 104 3 0 chr10 63796965 63797273 -81792015 - AluSp SINE Alu -4 309 1 21 0 0 0 chr10 63798432 63798453 -81790835 + AT_rich Low_complexity Low_complexity 1 21 0 2049 139 48 0 chr10 63798466 63798803 -81790485 - L1MA2 LINE L1 -2 6302 5950 4739 195 63 15 chr10 63798914 63800073 -81789215 - L1 LINE L1 -2181 3965 2751 409 281 79 73 chr10 63800127 63800430 -81788858 - MLT1K LTR MaLR -253 335 31 304 352 45 15 chr10 63800804 63801003 -81788285 + L1MC/D LINE L1 5562 5766 -2042 632 187 6 148 chr10 63801135 63801317 -81787971 + MSTD LTR MaLR 238 393 -3 563 311 102 4 chr10 63801361 63801625 -81787663 - L2 LINE L2 -774 2540 2251 877 142 71 6 chr10 63801968 63802137 -81787151 + L1MA4 LINE L1 6116 6295 -5 211 176 0 0 chr10 63803143 63803177 -81786111 + G-rich Low_complexity Low_complexity 3 36 0 2159 100 0 0 chr10 63803250 63803560 -81785728 - AluSx SINE Alu 0 311 2 269 313 92 20 chr10 63803933 63804237 -81785051 + L1 LINE L1 4405 4730 -1416 343 312 135 14 chr10 63804251 63804466 -81784822 + L1 LINE L1 4781 5021 -1125 2001 148 3 3 chr10 63804467 63804771 -81784517 + AluJb SINE Alu 9 312 0 244 236 179 32 chr10 63805095 63805218 -81784070 - L1P LINE L1 -2322 3824 3684 1501 285 54 16 chr10 63805349 63805794 -81783494 + LTR16B LTR ERVL 3 464 0 2025 102 3 71 chr10 63805834 63806157 -81783131 + AluSx SINE Alu 1 301 -11 543 291 96 14 chr10 63806158 63806378 -81782910 - MIR SINE MIR -4 258 21 790 230 66 47 chr10 63806423 63806697 -81782591 - L1MC5 LINE L1 -469 7492 7214 461 333 14 34 chr10 63807860 63808067 -81781221 + L2 LINE L2 2588 2790 -524 322 287 64 11 chr10 63808070 63808164 -81781124 + L2 LINE L2 2987 3085 -187 695 290 43 5 chr10 63808173 63808380 -81780908 + MIR SINE MIR 28 242 -20 203 283 10 61 chr10 63808519 63808618 -81780670 + MIR3 SINE MIR 108 201 -7 2333 87 7 0 chr10 63810160 63810460 -81778828 - AluSx SINE Alu -10 302 1 189 107 0 0 chr10 63810592 63810620 -81778668 + (T)n Simple_repeat Simple_repeat 1 28 0 42 48 0 0 chr10 63811516 63811579 -81777709 + AT_rich Low_complexity Low_complexity 1 63 0 2445 83 0 3 chr10 63812076 63812388 -81776900 - AluY SINE Alu 0 311 1 934 296 166 32 chr10 63812399 63812967 -81776321 + L2 LINE L2 2111 2754 -560 4754 120 22 33 chr10 63813026 63813775 -81775513 - L1PA14 LINE L1 -74 6087 5346 2142 129 10 0 chr10 63813775 63814077 -81775211 + AluSx SINE Alu 1 305 -7 4754 120 22 33 chr10 63814077 63814136 -81775152 - L1PA14 LINE L1 -815 5346 5288 822 171 32 0 chr10 63814134 63814292 -81774996 + L1PA14 LINE L1 5121 5283 -863 * 193 300 0 0 chr10 63814298 63814348 -81774940 + L2 LINE L2 2764 2813 -501 442 323 45 19 chr10 63814488 63814643 -81774645 + L2 LINE L2 2898 3056 -257 970 140 0 13 chr10 63814841 63814991 -81774297 - AluSx SINE Alu -144 168 21 824 154 13 70 chr10 63814992 63815015 -81774273 - MER2 DNA MER2_type -197 148 125 3373 89 43 7 chr10 63815015 63815411 -81773877 + MLT2A2 LTR ERVL 1 416 -37 369 0 0 0 chr10 63815411 63815452 -81773836 + (TA)n Simple_repeat Simple_repeat 1 41 0 3373 89 43 7 chr10 63815452 63815492 -81773796 + MLT2A2 LTR ERVL 416 453 0 16000 120 31 16 chr10 63815493 63816662 -81772626 + Tigger1 DNA MER2_type 1 1151 -1267 2123 142 0 0 chr10 63816662 63816965 -81772323 + AluSx SINE Alu 3 305 -7 16000 120 31 16 chr10 63816965 63817804 -81771484 + Tigger1 DNA MER2_type 1151 2053 -365 2388 86 7 0 chr10 63817804 63818106 -81771182 - AluSp SINE Alu -9 304 1 16000 120 31 16 chr10 63818106 63818477 -81770811 + Tigger1 DNA MER2_type 2053 2417 -1 824 154 13 70 chr10 63818477 63818607 -81770681 - MER2 DNA MER2_type -219 126 2 441 0 0 0 chr10 63818651 63818700 -81770588 + (TG)n Simple_repeat Simple_repeat 2 50 0 830 208 92 24 chr10 63819400 63819611 -81769677 + LTR45B LTR ERV1 250 579 -24 323 233 35 35 chr10 63819703 63819789 -81769499 + MIR3 SINE MIR 91 176 -32 2322 104 0 19 chr10 63820978 63821294 -81767994 - AluSx SINE Alu -2 310 1 2203 96 0 46 chr10 63822004 63822327 -81766961 + AluSq SINE Alu 1 308 -5 590 243 15 7 chr10 63822609 63822745 -81766543 + MER5B DNA MER1_type 1 137 -41 2080 121 6 13 chr10 63822881 63823194 -81766094 - AluSx SINE Alu -1 311 1 300 271 29 0 chr10 63823195 63823265 -81766023 - MER5A DNA MER1_type -113 76 5 218 322 0 0 chr10 63823548 63823607 -81765681 + CT-rich Low_complexity Low_complexity 2 60 0 265 216 102 23 chr10 63823916 63824004 -81765284 - MIR SINE MIR -44 218 124 802 138 25 38 chr10 63824019 63824178 -81765110 - AluSg/x SINE Alu 0 310 154 2288 172 47 58 chr10 63824519 63824985 -81764303 + LOR1b LTR ERV1 1 461 0 1326 170 0 90 chr10 63825365 63825688 -81763600 - AluJo SINE Alu -16 296 3 1805 207 15 6 chr10 63826047 63826390 -81762898 + MSTD LTR MaLR 1 346 -50 2157 169 76 32 chr10 63826616 63827049 -81762239 + LTR47A LTR ERVL 1 452 0 2235 112 3 10 chr10 63827064 63827378 -81761910 + AluSx SINE Alu 1 312 0 2116 111 51 26 chr10 63827930 63828282 -81761006 + L1PA16 LINE L1 5806 6166 0 2306 98 3 16 chr10 63828306 63828635 -81760653 - AluSq SINE Alu -10 303 1 229 167 0 21 chr10 63828635 63828660 -81760628 + CT-rich Low_complexity Low_complexity 4 180 0 391 274 171 0 chr10 63829433 63829550 -81759738 + MER91C DNA MER1_type 1 137 -3 774 218 111 97 chr10 63830001 63830299 -81758989 - MLT1K LTR MaLR -6 582 281 691 278 47 5 chr10 63830393 63830605 -81758683 - MLT1K LTR MaLR -333 255 35 193 364 70 40 chr10 63831267 63831495 -81757793 + L2 LINE L2 2815 3049 -223 210 247 278 10 chr10 63831771 63831868 -81757420 + L2 LINE L2 3188 3310 -3 1346 126 30 56 chr10 63832789 63833020 -81756268 - AluJb SINE Alu -81 231 7 7572 150 20 11 chr10 63833256 63835602 -81753686 + L1MA6 LINE L1 3926 6294 -6 279 0 0 0 chr10 63836119 63836150 -81753138 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 241 253 24 60 chr10 63836862 63836945 -81752343 - L2 LINE L2 0 3272 3193 226 167 0 0 chr10 63837019 63837061 -81752227 + MLT1K LTR MaLR 160 201 -387 308 282 0 24 chr10 63837220 63837305 -81751983 + GA-rich Low_complexity Low_complexity 5 87 0 342 230 30 20 chr10 63837868 63837968 -81751320 + MLT1F1 LTR MaLR 1 101 -466 272 176 162 0 chr10 63837968 63838042 -81751246 + Charlie1 DNA MER1_type 1611 1696 -1065 1226 157 16 12 chr10 63838069 63838317 -81750971 + L1MB7 LINE L1 5927 6175 -9 534 283 34 19 chr10 63838322 63838587 -81750701 + L1M4 LINE L1 3386 3654 -2492 336 178 42 76 chr10 63838589 63838661 -81750627 - L1M4 LINE L1 -2159 3987 3919 2360 75 7 10 chr10 63838661 63838968 -81750320 + AluY SINE Alu 1 306 -5 336 178 42 76 chr10 63838968 63839013 -81750275 - L1M4 LINE L1 -2227 3919 3874 274 145 101 14 chr10 63839010 63839079 -81750209 + L1M4 LINE L1 3769 3843 -2303 * 483 209 0 0 chr10 63839090 63839195 -81750093 + L1M4 LINE L1 5127 5231 -915 876 223 29 10 chr10 63839202 63839408 -81749880 + MER97c DNA MER1_type? 1 210 -880 1077 221 35 38 chr10 63839410 63839700 -81749588 + Charlie1a DNA MER1_type 12 300 -1155 2189 105 3 23 chr10 63839723 63840029 -81749259 + AluSp SINE Alu 1 300 -13 23 54 0 0 chr10 63840044 63840081 -81749207 + AT_rich Low_complexity Low_complexity 1 37 0 471 187 207 0 chr10 63840100 63840250 -81749038 + L1MA9 LINE L1 6132 6312 0 1587 192 112 19 chr10 63840278 63840706 -81748582 + Charlie1a DNA MER1_type 305 772 -683 358 196 197 27 chr10 63842015 63842156 -81747132 - MLT1H LTR MaLR -3 546 400 2294 105 3 0 chr10 63843000 63843306 -81745982 + AluSc SINE Alu 1 307 -2 270 312 48 40 chr10 63844045 63844170 -81745118 - MIR SINE MIR -117 145 20 682 191 51 25 chr10 63844512 63844639 -81744649 + LTR32 LTR ERVL 15 145 -326 3820 95 19 14 chr10 63844639 63844987 -81744301 + MER4B LTR ERV1 1 355 -255 1744 164 0 48 chr10 63844987 63845297 -81743991 - AluJb SINE Alu -17 295 1 3820 95 19 14 chr10 63845297 63845537 -81743751 + MER4B LTR ERV1 355 592 -18 616 100 0 11 chr10 63845523 63845613 -81743675 + MER4B LTR ERV1 522 610 0 * 1060 167 16 0 chr10 63845613 63845799 -81743489 + LTR32 LTR ERVL 164 352 -119 800 205 0 6 chr10 63845884 63846040 -81743248 + LTR32 LTR ERVL 317 471 0 2268 145 73 0 chr10 63846087 63846486 -81742802 + MER68 LTR ERV1 135 562 0 459 113 0 0 chr10 63846818 63846898 -81742390 + (A)n Simple_repeat Simple_repeat 1 80 0 538 298 124 39 chr10 63846905 63847372 -81741916 + L2 LINE L2 2454 2960 -354 216 333 157 9 chr10 63847518 63847626 -81741662 + L2 LINE L2 3123 3246 -26 368 298 65 23 chr10 63848019 63848315 -81740973 + MLT1J2 LTR MaLR 55 401 -110 28 79 0 0 chr10 63848588 63848651 -81740637 + AT_rich Low_complexity Low_complexity 1 63 0 225 0 0 0 chr10 63848897 63848922 -81740366 + (A)n Simple_repeat Simple_repeat 1 25 0 379 329 36 29 chr10 63849025 63849165 -81740123 + MIR3 SINE MIR 7 147 -61 501 239 116 56 chr10 63850326 63850577 -81738711 + MER46C DNA MER2_type 1 266 -72 1563 204 66 29 chr10 63850594 63851036 -81738252 + MLT1C LTR MaLR 3 460 -7 272 186 102 0 chr10 63851057 63851116 -81738172 + MER46C DNA MER2_type 273 337 -1 285 29 0 0 chr10 63851551 63851585 -81737703 + (CA)n Simple_repeat Simple_repeat 2 35 0 1690 213 59 42 chr10 63851981 63852455 -81736833 + MLT1D LTR MaLR 24 505 0 1520 168 95 0 chr10 63853508 63853782 -81735506 - AluJb SINE Alu -12 300 1 2089 112 11 0 chr10 63853811 63854096 -81735192 - AluSx SINE Alu -24 288 1 595 208 113 25 chr10 63854108 63854267 -81735021 - L2 LINE L2 -604 2710 2538 443 281 49 27 chr10 63855596 63855781 -81733507 + Charlie8 DNA MER1_type 84 272 -2145 324 264 46 0 chr10 63855947 63856034 -81733254 - MIR SINE MIR -20 242 152 189 0 0 0 chr10 63856321 63856342 -81732946 + (A)n Simple_repeat Simple_repeat 1 21 0 200 238 0 0 chr10 63856618 63856660 -81732628 + (TA)n Simple_repeat Simple_repeat 2 43 0 517 252 31 8 chr10 63858017 63858144 -81731144 + L2 LINE L2 3184 3313 0 205 279 44 0 chr10 63858868 63858936 -81730352 - L2 LINE L2 -6 3307 3237 2210 98 0 10 chr10 63859143 63859438 -81729850 - AluSq SINE Alu -17 296 5 636 274 85 0 chr10 63860411 63860623 -81728665 + MLT1I LTR MaLR 159 388 -21 279 222 144 44 chr10 63860750 63860840 -81728448 - Charlie8 DNA MER1_type -2318 99 1 245 308 0 0 chr10 63861205 63861270 -81728018 + MER5C DNA MER1_type 12 76 -248 184 284 24 79 chr10 63861422 63861549 -81727739 + L2 LINE L2 3190 3309 -4 539 239 29 7 chr10 63861604 63861742 -81727546 + Charlie8 DNA MER1_type 124 264 -2153 385 282 284 37 chr10 63862330 63862685 -81726603 - L2 LINE L2 0 3313 2871 310 200 0 0 chr10 63862897 63862957 -81726331 + L2 LINE L2 3213 3272 0 413 262 0 0 chr10 63863632 63863716 -81725572 - MIR SINE MIR -75 133 50 1263 119 72 20 chr10 63863905 63864156 -81725132 - L1MA5A LINE L1 -6 6291 6028 637 317 163 21 chr10 63864179 63864743 -81724545 + L2 LINE L2 2004 2647 -667 1122 104 18 6 chr10 63864760 63864923 -81724365 - AluY SINE Alu -8 303 139 2289 103 3 0 chr10 63865225 63865526 -81723762 + AluSq SINE Alu 1 302 -11 226 299 8 17 chr10 63865586 63865703 -81723585 + L1ME3 LINE L1 309 424 -5948 * 1439 248 66 5 chr10 63865699 63866106 -81723182 + L1ME3A LINE L1 5733 6164 -6 404 276 31 108 chr10 63866122 63866178 -81723110 + L1ME3 LINE L1 409 468 -5904 2181 106 11 0 chr10 63866178 63866462 -81722826 + AluSx SINE Alu 1 287 -25 404 276 31 108 chr10 63866462 63866829 -81722459 + L1ME3 LINE L1 468 799 -5573 2459 80 0 0 chr10 63866893 63867193 -81722095 - AluSc SINE Alu -9 300 1 431 202 79 0 chr10 63867195 63867309 -81721979 + L1ME1 LINE L1 6043 6165 -1 411 245 43 121 chr10 63867409 63867691 -81721597 + L1ME3 LINE L1 938 1197 -5175 2238 110 10 0 chr10 63867829 63868128 -81721160 + AluSq SINE Alu 1 302 -11 447 274 89 0 chr10 63868138 63868295 -81720993 - MER90 LTR ERV1 -200 375 205 812 262 24 28 chr10 63868468 63868792 -81720496 + L1ME3 LINE L1 1124 1495 -4877 517 109 0 11 chr10 63868816 63868908 -81720380 + L1PA15 LINE L1 6070 6160 -5 2049 147 0 0 chr10 63868913 63869212 -81720076 + AluSx SINE Alu 1 299 -13 397 293 70 45 chr10 63869260 63869790 -81719498 + L1ME3 LINE L1 2396 2938 -3444 524 224 59 122 chr10 63869838 63870075 -81719213 - MIR SINE MIR 0 262 41 432 267 88 52 chr10 63870703 63871346 -81717942 - L1MC5 LINE L1 -273 7688 7196 2427 106 3 0 chr10 63871351 63871699 -81717589 - AluSp SINE Alu 0 349 1 289 272 10 0 chr10 63871701 63871804 -81717484 - L1MC4 LINE L1 -842 7200 7097 608 293 84 45 chr10 63871928 63872492 -81716796 + L1ME3 LINE L1 3018 3941 -2441 772 292 50 10 chr10 63872494 63872792 -81716496 + MLT1J1 LTR MaLR 9 318 -128 477 274 120 41 chr10 63872793 63872867 -81716421 + L1ME3 LINE L1 5457 5524 -874 198 0 0 0 chr10 63872867 63872889 -81716399 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 477 274 120 41 chr10 63872889 63872935 -81716353 + L1ME3 LINE L1 5524 5565 -833 207 0 0 0 chr10 63872935 63872958 -81716330 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 477 274 120 41 chr10 63872958 63873112 -81716176 + L1ME3 LINE L1 5565 5706 -692 2297 110 0 0 chr10 63873112 63873411 -81715877 - AluSg1 SINE Alu -10 299 1 477 274 120 41 chr10 63873411 63873822 -81715466 + L1ME3 LINE L1 5706 6197 -201 327 241 25 0 chr10 63873914 63873993 -81715295 + 5S rRNA rRNA 4 84 -37 2362 103 0 3 chr10 63874045 63874356 -81714932 - AluSg SINE Alu 0 310 1 808 311 33 0 chr10 63874482 63874725 -81714563 - MER82 DNA MER2_type 0 653 403 1600 178 117 35 chr10 63874725 63874748 -81714540 + MSTB LTR MaLR 1 21 -405 2669 168 34 0 chr10 63874748 63875218 -81714070 - MER66B LTR ERV1 0 486 1 1600 178 117 35 chr10 63875218 63875588 -81713700 + MSTB LTR MaLR 21 426 0 2033 184 13 2 chr10 63875594 63875991 -81713297 - MER82 DNA MER2_type -252 401 1 10608 150 36 35 chr10 63876097 63878272 -81711016 + L1M4c LINE L1 24 2200 -4184 1875 188 107 28 chr10 63878270 63878728 -81710560 + L1MB2 LINE L1 5676 6169 -2 * 192 61 30 0 chr10 63878832 63878865 -81710423 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 2262 87 0 7 chr10 63878865 63879146 -81710142 - AluSg SINE Alu -5 305 1 24 32 0 0 chr10 63879733 63879764 -81709524 + AT_rich Low_complexity Low_complexity 1 31 0 319 162 0 40 chr10 63879804 63879878 -81709410 + L1MC3 LINE L1 7705 7775 -10 2154 89 7 24 chr10 63879944 63880236 -81709052 - AluY SINE Alu -22 289 3 2849 224 14 10 chr10 63880265 63880887 -81708401 + MLT1E2 LTR MaLR 1 625 -1 298 299 24 16 chr10 63881032 63881159 -81708129 - LTR33 LTR ERVL 0 521 394 182 160 60 80 chr10 63881213 63881263 -81708025 + L2 LINE L2 3224 3272 0 3244 220 13 23 chr10 63881761 63882125 -81707163 + L1MB7 LINE L1 4114 4480 -1666 2136 92 41 14 chr10 63882125 63882420 -81706868 + AluSx SINE Alu 1 303 -9 3244 220 13 23 chr10 63882420 63882979 -81706309 + L1MB7 LINE L1 4480 5028 -1118 270 103 0 112 chr10 63882986 63883093 -81706195 - AluSp/q SINE Alu -2 301 207 2259 112 0 3 chr10 63884134 63884429 -81704859 + AluSq SINE Alu 1 294 -19 3007 192 40 27 chr10 63884443 63885361 -81703927 + L1MB7 LINE L1 5086 6025 -159 324 0 0 0 chr10 63885372 63885408 -81703880 + (CA)n Simple_repeat Simple_repeat 1 36 0 215 200 0 17 chr10 63885519 63885579 -81703709 + CT-rich Low_complexity Low_complexity 2 60 0 2249 45 7 18 chr10 63885653 63885986 -81703302 - AluY SINE Alu 0 330 1 21 0 0 0 chr10 63885986 63886007 -81703281 + AT_rich Low_complexity Low_complexity 1 21 0 2330 122 0 0 chr10 63886011 63886323 -81702965 - AluSx SINE Alu 0 312 1 4901 113 27 33 chr10 63886331 63887118 -81702170 - L1PA15 LINE L1 -8 6157 5374 2563 48 0 16 chr10 63887118 63887433 -81701855 - AluY SINE Alu -1 310 1 4901 113 27 33 chr10 63887433 63887492 -81701796 - L1PA15 LINE L1 -791 5374 5316 2033 102 3 14 chr10 63887579 63887864 -81701424 - AluY SINE Alu -29 282 1 1364 283 54 16 chr10 63887904 63888349 -81700939 - LTR16B LTR ERVL 0 464 3 387 268 226 24 chr10 63888480 63888648 -81700640 + L1M4 LINE L1 3684 3885 -2261 318 302 57 94 chr10 63888737 63888933 -81700355 + L1M4 LINE L1 4745 4926 -1220 1985 169 0 3 chr10 63888933 63889246 -81700042 - AluJb SINE Alu 0 312 1 318 302 57 94 chr10 63889246 63889367 -81699921 + L1M4 LINE L1 4926 5050 -1096 1440 222 62 53 chr10 63890638 63891152 -81698136 - MER39 LTR ERV1 -9 698 1 32 26 0 0 chr10 63891245 63891284 -81698004 + AT_rich Low_complexity Low_complexity 1 39 0 1726 176 3 14 chr10 63891746 63892041 -81697247 - AluJo SINE Alu -20 292 1 727 254 65 106 chr10 63892053 63893117 -81696171 + L1MC4 LINE L1 7025 8042 0 303 224 0 0 chr10 63893583 63893659 -81695629 + MER116 DNA Mariner 1 76 -4 716 324 109 27 chr10 63893671 63893855 -81695433 - L3 LINE CR1 -75 1502 1334 2326 58 0 64 chr10 63893855 63894182 -81695106 - AluSq SINE Alu -7 306 1 716 324 109 27 chr10 63894182 63894197 -81695091 - L3 LINE CR1 -243 1334 1322 2136 96 3 0 chr10 63894197 63894488 -81694800 - AluY SINE Alu -19 292 1 716 324 109 27 chr10 63894488 63894654 -81694634 - L3 LINE CR1 -255 1322 1106 679 188 88 28 chr10 63894693 63894874 -81694414 - MER20 DNA MER1_type -21 198 7 1948 135 0 11 chr10 63895415 63895697 -81693591 - AluSg SINE Alu -31 279 1 683 293 92 4 chr10 63895885 63896124 -81693164 + MIR SINE MIR 3 262 0 2385 136 23 42 chr10 63896199 63896433 -81692855 - MSTB LTR MaLR 0 426 202 2066 122 14 14 chr10 63896433 63896593 -81692695 - AluSq SINE Alu -17 296 134 2157 118 6 29 chr10 63896593 63896908 -81692380 - AluSx SINE Alu -4 308 1 2066 122 14 14 chr10 63896908 63897043 -81692245 - AluSq SINE Alu -178 135 1 2385 136 23 42 chr10 63897043 63897242 -81692046 - MSTB LTR MaLR -224 202 1 212 211 58 0 chr10 63897284 63897336 -81691952 - L3 LINE CR1 -732 845 791 1154 188 39 0 chr10 63897444 63897652 -81691636 + MER20 DNA MER1_type 1 216 -3 504 326 39 6 chr10 63897668 63897846 -81691442 - L3 LINE CR1 -767 810 627 687 293 29 37 chr10 63897869 63898115 -81691173 + MIR SINE MIR 2 245 -17 1779 150 0 38 chr10 63898162 63898455 -81690833 - AluJo SINE Alu -30 282 1 2119 116 13 17 chr10 63898624 63898925 -81690363 - AluSg SINE Alu -10 300 1 2535 56 0 0 chr10 63899149 63899452 -81689836 - AluY SINE Alu -8 303 1 198 0 0 0 chr10 63900323 63900345 -81688943 + (TTTTA)n Simple_repeat Simple_repeat 4 25 0 180 302 75 0 chr10 63900411 63900464 -81688824 + L2 LINE L2 2767 2823 -491 1108 130 36 20 chr10 63900492 63900833 -81688455 - L1M4 LINE L1 -724 5430 5102 1488 186 136 0 chr10 63901124 63901463 -81687825 - MER57A LTR ERV1 -11 392 8 425 302 224 12 chr10 63901471 63901713 -81687575 - L2 LINE L2 -297 3016 2736 355 185 111 44 chr10 63901740 63901875 -81687413 + L1MC5 LINE L1 7787 7930 -31 585 238 99 22 chr10 63901880 63902061 -81687227 - L2 LINE L2 -615 2699 2505 853 205 0 43 chr10 63902061 63902246 -81687042 + AluJb SINE Alu 132 308 -4 708 263 27 0 chr10 63902516 63902702 -81686586 - L2 LINE L2 -945 2369 2179 2089 123 13 0 chr10 63902785 63903086 -81686202 - AluSx SINE Alu -6 306 2 252 100 0 0 chr10 63903086 63903126 -81686162 + (CA)n Simple_repeat Simple_repeat 1 40 0 197 319 55 11 chr10 63903598 63903689 -81685599 + MER5A DNA MER1_type 56 150 -39 * 268 364 20 0 chr10 63903609 63903708 -81685580 - MER5A DNA MER1_type -58 131 31 480 291 88 63 chr10 63904250 63904378 -81684910 + L2 LINE L2 2649 2772 -541 2445 105 0 0 chr10 63904378 63904691 -81684597 - AluSq SINE Alu 0 313 1 480 291 88 63 chr10 63904691 63904903 -81684385 + L2 LINE L2 2772 2996 -317 463 293 44 44 chr10 63904937 63905142 -81684146 + L2 LINE L2 3109 3313 0 1933 135 3 7 chr10 63906064 63906375 -81682913 - AluSx SINE Alu 0 310 1 983 240 4 26 chr10 63906375 63906642 -81682646 + MLT2B1 LTR ERVL 2 262 -258 240 143 0 0 chr10 63906654 63906696 -81682592 + (TG)n Simple_repeat Simple_repeat 2 43 0 360 181 0 2 chr10 63906958 63907035 -81682253 + L1ME3A LINE L1 5825 5900 -264 1709 157 4 0 chr10 63907081 63907336 -81681952 + AluJb SINE Alu 29 284 -28 2091 210 84 8 chr10 63907419 63908061 -81681227 - MER97a DNA MER1_type? 0 894 204 2355 189 86 21 chr10 63908061 63908712 -81680576 - Charlie1a DNA MER1_type 0 1455 763 2839 53 8 0 chr10 63908916 63909275 -81680013 - L1PA7 LINE L1 0 6154 5793 197 128 21 0 chr10 63909277 63909324 -81679964 + (CAAA)n Simple_repeat Simple_repeat 2 49 0 2104 115 7 3 chr10 63909963 63910258 -81679030 - AluSq SINE Alu -17 296 1 1562 194 112 19 chr10 63910855 63911283 -81678005 - Charlie1a DNA MER1_type -683 772 305 471 187 207 0 chr10 63911311 63911461 -81677827 - L1MA9 LINE L1 0 6312 6132 23 54 0 0 chr10 63911480 63911517 -81677771 + AT_rich Low_complexity Low_complexity 1 37 0 2245 98 3 23 chr10 63911532 63911838 -81677450 - AluSp SINE Alu -13 300 1 1072 225 36 36 chr10 63911844 63912151 -81677137 - Charlie1a DNA MER1_type -1137 318 12 876 223 29 10 chr10 63912153 63912359 -81676929 - MER97c DNA MER1_type? -880 210 1 483 209 0 0 chr10 63912366 63912471 -81676817 - L1M4 LINE L1 -915 5231 5127 274 145 101 14 chr10 63912482 63912551 -81676737 - L1M4 LINE L1 -2303 3843 3769 * 336 178 42 76 chr10 63912548 63912593 -81676695 + L1M4 LINE L1 3874 3919 -2227 2346 78 7 10 chr10 63912593 63912900 -81676388 - AluY SINE Alu -5 306 1 336 178 42 76 chr10 63912900 63912972 -81676316 + L1M4 LINE L1 3919 3987 -2159 534 283 34 19 chr10 63912974 63913239 -81676049 - L1M4 LINE L1 -2492 3654 3386 1322 150 16 4 chr10 63913244 63913490 -81675798 - L1MB7 LINE L1 -9 6175 5927 272 176 162 0 chr10 63913517 63913591 -81675697 - Charlie1 DNA MER1_type -1065 1696 1611 342 230 30 20 chr10 63913591 63913691 -81675597 - MLT1F1 LTR MaLR -466 101 1 308 282 0 24 chr10 63914254 63914339 -81674949 + CT-rich Low_complexity Low_complexity 5 87 0 226 167 0 0 chr10 63914498 63914540 -81674748 - MLT1K LTR MaLR -387 201 160 241 253 24 60 chr10 63914614 63914697 -81674591 + L2 LINE L2 3193 3272 0 279 0 0 0 chr10 63915410 63915441 -81673847 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 5291 132 70 3 chr10 63915958 63916929 -81672359 - L1MA6 LINE L1 -6 6294 5259 409 259 30 23 chr10 63916989 63917120 -81672168 - L2 LINE L2 -719 2595 2464 1708 202 0 3 chr10 63917524 63917811 -81671477 + AluJo SINE Alu 1 286 -26 306 284 41 77 chr10 63918085 63918254 -81671034 + MIR SINE MIR 81 243 -19 262 186 0 0 chr10 63918236 63918279 -81671009 - MIR SINE MIR -11 251 209 * 1338 227 42 85 chr10 63918292 63918821 -81670467 - MLT1H LTR MaLR -38 511 6 556 248 186 0 chr10 63918842 63918987 -81670301 - MIR SINE MIR -70 192 21 327 256 58 16 chr10 63919018 63919139 -81670149 + MLT1I LTR MaLR 1 126 -283 2234 94 0 11 chr10 63919432 63919719 -81669569 + AluSc SINE Alu 1 284 -25 332 333 8 16 chr10 63919723 63919849 -81669439 - HAL1b LINE L1 -27 1321 1197 519 295 101 53 chr10 63920017 63920244 -81669044 + MIR SINE MIR 19 256 -6 2137 142 7 0 chr10 63920300 63920610 -81668678 - AluSx SINE Alu 0 312 1 21 36 0 0 chr10 63921561 63921589 -81667699 + AT_rich Low_complexity Low_complexity 1 28 0 1841 5 0 0 chr10 63922898 63923098 -81666190 + AluYb8 SINE Alu 114 313 -5 223 333 56 103 chr10 63924211 63924280 -81665008 - L2 LINE L2 -9 3263 3192 1899 151 0 24 chr10 63924280 63924578 -81664710 + AluJb SINE Alu 1 291 -21 223 333 56 103 chr10 63924578 63924847 -81664441 - L2 LINE L2 -80 3192 2941 2114 126 0 3 chr10 63924953 63925255 -81664033 + AluSq SINE Alu 1 301 -12 355 184 19 87 chr10 63925304 63925407 -81663881 - L2 LINE L2 -54 3259 3164 2390 104 0 0 chr10 63925409 63925718 -81663570 + AluSq SINE Alu 1 309 -4 1829 268 60 38 chr10 63926164 63927069 -81662219 + L2 LINE L2 2378 3313 0 292 212 82 0 chr10 63927295 63927380 -81661908 - L2 LINE L2 -179 3134 3043 730 192 0 8 chr10 63977432 63977562 -81611726 + AluJb SINE Alu 172 300 -12 1916 154 0 35 chr10 63978785 63979103 -81610185 - AluJo SINE Alu -5 307 1 1725 159 48 7 chr10 63979964 63980235 -81609053 + AluJo SINE Alu 1 282 -30 319 122 0 12 chr10 63980193 63980246 -81609042 + Alu SINE Alu 241 282 -20 429 203 114 16 chr10 63981308 63981431 -81607857 + MIR SINE MIR 114 248 -14 218 184 0 0 chr10 63981646 63981684 -81607604 + (TTCA)n Simple_repeat Simple_repeat 1 38 0 189 266 76 51 chr10 63981702 63981781 -81607507 - L2 LINE L2 -46 3226 3146 275 276 119 30 chr10 63981843 63981977 -81607311 - MLT1J2 LTR MaLR -33 417 272 279 223 180 69 chr10 63984400 63984633 -81604655 + L1ME3A LINE L1 5911 6169 -1 268 282 141 20 chr10 63984643 63984792 -81604496 + MIR3 SINE MIR 3 169 -39 474 305 71 43 chr10 63985478 63985723 -81603565 + MLT1K LTR MaLR 140 398 -190 2152 122 18 73 chr10 63985723 63986108 -81603180 + THE1B LTR MaLR 1 364 0 474 305 71 43 chr10 63986108 63986187 -81603101 + MLT1K LTR MaLR 398 473 -115 391 332 80 11 chr10 63988512 63988699 -81600589 + MIR SINE MIR 28 227 -35 202 303 225 11 chr10 63989031 63989209 -81600079 - L3b LINE CR1 -206 1377 1162 1745 174 51 68 chr10 63989357 63989811 -81599477 + MER113 DNA MER1_type? 3 448 -73 395 257 44 7 chr10 63989963 63990099 -81599189 + MIR SINE MIR 31 171 -91 599 191 21 14 chr10 63990253 63990394 -81598894 + MIR SINE MIR 88 229 -33 762 244 67 10 chr10 63990685 63990878 -81598410 + MER63A DNA MER1_type 2 205 -5 375 300 53 12 chr10 63990925 63991086 -81598202 + MIR SINE MIR 20 182 -55 359 301 27 41 chr10 63991169 63991315 -81597973 + MIR3 SINE MIR 46 189 -19 1698 185 7 3 chr10 63992261 63992559 -81596729 - AluJo SINE Alu -12 300 2 26 82 0 0 chr10 63992732 63992793 -81596495 + AT_rich Low_complexity Low_complexity 1 61 0 467 258 13 69 chr10 63993201 63993360 -81595928 - MIR SINE MIR -2 260 111 26 64 0 0 chr10 63993541 63993588 -81595700 + AT_rich Low_complexity Low_complexity 1 47 0 431 77 0 0 chr10 63994231 63994283 -81595005 + Alu SINE Alu 239 290 -21 243 0 0 0 chr10 63994288 63994315 -81594973 + (CA)n Simple_repeat Simple_repeat 2 28 0 536 155 23 8 chr10 63994358 63994487 -81594801 + (CA)n Simple_repeat Simple_repeat 2 132 0 2382 88 0 7 chr10 63994490 63994796 -81594492 - AluSx SINE Alu -8 304 1 1031 231 0 9 chr10 63994796 63995012 -81594276 - AluJo SINE Alu -14 298 85 3902 168 33 26 chr10 63995012 63995321 -81593967 + L1M1 LINE L1 2211 2516 -5049 492 48 0 0 chr10 63995321 63995384 -81593904 + (GA)n Simple_repeat Simple_repeat 1 63 0 3902 168 33 26 chr10 63995384 63996137 -81593151 + L1M1 LINE L1 2516 3262 -4303 2103 148 0 0 chr10 63996137 63996435 -81592853 - AluSx SINE Alu -14 298 1 3902 168 33 26 chr10 63996435 63997252 -81592036 + L1M1 LINE L1 3262 4280 -3285 23 33 0 0 chr10 63997530 63997560 -81591728 + AT_rich Low_complexity Low_complexity 1 30 0 192 77 0 0 chr10 64000329 64000355 -81588933 + (CA)n Simple_repeat Simple_repeat 2 27 0 356 274 21 11 chr10 64000428 64000523 -81588765 + L2 LINE L2 3177 3272 0 545 196 22 65 chr10 64001231 64001287 -81588001 + MER2 DNA MER2_type 209 266 -79 2365 92 0 0 chr10 64001287 64001580 -81587708 - AluSx SINE Alu -19 293 1 545 196 22 65 chr10 64001580 64001661 -81587627 + MER2 DNA MER2_type 266 340 -5 2331 164 76 9 chr10 64001977 64002409 -81586879 + LOR1b LTR ERV1 1 461 0 230 304 19 42 chr10 64002665 64002776 -81586512 - MER5B DNA MER1_type -51 138 20 225 319 44 0 chr10 64002802 64002893 -81586395 - MIR SINE MIR 0 262 168 201 159 43 0 chr10 64003348 64003387 -81585901 + MIR SINE MIR 48 90 -118 2210 136 20 23 chr10 64003520 64003865 -81585423 - MER2 DNA MER2_type 0 344 1 546 292 30 6 chr10 64004352 64004520 -81584768 - MIR SINE MIR -13 249 78 226 162 0 0 chr10 64004597 64004634 -81584654 + AluSp SINE Alu 1 37 -262 2236 107 0 23 chr10 64004634 64004942 -81584346 - AluSg SINE Alu -9 301 1 2161 89 4 0 chr10 64004942 64005213 -81584075 + AluSp SINE Alu 27 298 -15 924 247 71 42 chr10 64005241 64005752 -81583536 - L1ME LINE L1 -285 5885 5237 1334 83 0 18 chr10 64006901 64007069 -81582219 - AluSx SINE Alu -127 185 21 854 155 13 65 chr10 64007070 64007093 -81582195 - MER2 DNA MER2_type -197 148 125 3373 89 43 7 chr10 64007093 64007489 -81581799 + MLT2A2 LTR ERVL 1 416 -37 369 0 0 0 chr10 64007489 64007530 -81581758 + (TA)n Simple_repeat Simple_repeat 1 41 0 3373 89 43 7 chr10 64007530 64007570 -81581718 + MLT2A2 LTR ERVL 416 453 0 16068 120 31 15 chr10 64007571 64008738 -81580550 + Tigger1 DNA MER2_type 1 1148 -1270 2123 142 0 0 chr10 64008738 64009041 -81580247 + AluSx SINE Alu 3 305 -7 16068 120 31 15 chr10 64009041 64009880 -81579408 + Tigger1 DNA MER2_type 1148 2053 -365 2432 86 3 0 chr10 64009880 64010183 -81579105 - AluSp SINE Alu -9 304 1 16068 120 31 15 chr10 64010183 64010554 -81578734 + Tigger1 DNA MER2_type 2053 2417 -1 854 155 13 65 chr10 64010554 64010683 -81578605 - MER2 DNA MER2_type -219 126 2 441 0 0 0 chr10 64010727 64010776 -81578512 + (TG)n Simple_repeat Simple_repeat 2 50 0 549 219 125 12 chr10 64011372 64011532 -81577756 + MIR SINE MIR 75 252 -10 2333 87 7 0 chr10 64012775 64013075 -81576213 - AluSx SINE Alu -10 302 1 189 107 0 0 chr10 64013207 64013235 -81576053 + (T)n Simple_repeat Simple_repeat 1 28 0 1338 126 30 56 chr10 64014349 64014580 -81574708 + AluJb SINE Alu 7 231 -81 201 247 278 10 chr10 64015501 64015598 -81573690 - L2 LINE L2 -3 3310 3188 758 278 47 5 chr10 64016764 64016976 -81572312 + MLT1K LTR MaLR 35 255 -333 883 215 111 97 chr10 64017070 64017368 -81571920 + MLT1K LTR MaLR 281 582 -6 373 274 171 0 chr10 64017819 64017936 -81571352 + MER91C DNA MER1_type 4 140 0 228 167 0 21 chr10 64018709 64018734 -81570554 + GA-rich Low_complexity Low_complexity 4 29 -21 2359 95 3 13 chr10 64018734 64019040 -81570248 + AluSq SINE Alu 1 303 -10 228 167 0 21 chr10 64019040 64019062 -81570226 + GA-rich Low_complexity Low_complexity 29 50 0 2116 111 51 26 chr10 64019086 64019438 -81569850 - L1PA16 LINE L1 0 6166 5806 2265 108 3 10 chr10 64019990 64020304 -81568984 - AluSx SINE Alu 0 312 1 2127 168 76 35 chr10 64020319 64020753 -81568535 - LTR47A LTR ERVL 0 452 1 1805 207 15 6 chr10 64020979 64021322 -81567966 - MSTD LTR MaLR -50 346 1 1714 181 0 33 chr10 64021681 64021985 -81567303 + AluJo SINE Alu 3 296 -16 2288 172 47 58 chr10 64022365 64022831 -81566457 - LOR1b LTR ERV1 0 461 1 2464 84 3 0 chr10 64023811 64024119 -81565169 + AluSx SINE Alu 1 309 -3 25 51 0 0 chr10 64024448 64024487 -81564801 + AT_rich Low_complexity Low_complexity 1 39 0 468 242 75 0 chr10 64024886 64025006 -81564282 - MIR SINE MIR -80 182 54 340 262 123 14 chr10 64025010 64025166 -81564122 - MIR3 SINE MIR -85 123 4 2117 104 0 0 chr10 64026196 64026497 -81562791 + AluSc SINE Alu 1 301 0 246 208 0 0 chr10 64026686 64026739 -81562549 + MLT1J LTR MaLR 426 478 -33 213 191 24 0 chr10 64026838 64026880 -81562408 + MIR SINE MIR 108 150 -112 500 223 27 0 chr10 64027039 64027151 -81562137 - MIR SINE MIR -94 168 54 1392 214 28 68 chr10 64027355 64027813 -81561475 + L1MC5 LINE L1 6704 7143 -818 1808 164 3 10 chr10 64027819 64028118 -81561170 + AluJb SINE Alu 1 297 -15 826 232 70 55 chr10 64028169 64028497 -81560791 + L1MC5 LINE L1 7160 7492 -469 543 291 96 14 chr10 64028542 64028762 -81560526 + MIR SINE MIR 21 258 -4 2070 97 3 66 chr10 64028763 64029082 -81560206 - AluSg SINE Alu -11 299 1 186 217 17 33 chr10 64029608 64029668 -81559620 + L3 LINE CR1 634 692 -885 216 0 0 0 chr10 64030029 64030053 -81559235 + (T)n Simple_repeat Simple_repeat 1 24 0 243 0 0 0 chr10 64030553 64030580 -81558708 + (T)n Simple_repeat Simple_repeat 1 27 0 353 343 102 13 chr10 64031040 64031276 -81558012 - L1MC/D LINE L1 -1990 5818 5562 409 281 79 73 chr10 64031650 64031953 -81557335 + MLT1K LTR MaLR 31 335 -253 12107 148 27 10 chr10 64032032 64035498 -81553790 + L1MA3 LINE L1 2779 6302 -3 21 0 0 0 chr10 64035511 64035532 -81553756 + AT_rich Low_complexity Low_complexity 1 21 0 2371 104 3 0 chr10 64036451 64036759 -81552529 + AluSp SINE Alu 1 309 -4 227 200 387 0 chr10 64038202 64038277 -81551011 - L2 LINE L2 -1 3271 3168 1759 174 3 7 chr10 64038311 64038610 -81550678 + AluJo SINE Alu 1 298 -14 2147 100 0 0 chr10 64038974 64039284 -81550004 + AluSx SINE Alu 2 311 0 211 176 0 0 chr10 64039357 64039391 -81549897 + C-rich Low_complexity Low_complexity 3 36 0 810 98 0 0 chr10 64040411 64040533 -81548755 - L1MA4 LINE L1 -19 6281 6160 583 311 102 4 chr10 64040909 64041173 -81548115 + L2 LINE L2 2251 2540 -774 941 186 161 113 chr10 64041217 64041518 -81547770 - MSTD LTR MaLR -3 393 69 2216 92 7 3 chr10 64041518 64041813 -81547475 - AluSg1 SINE Alu -13 296 1 941 186 161 113 chr10 64041813 64041883 -81547405 - MSTD LTR MaLR -327 69 4 2090 125 0 7 chr10 64042219 64042522 -81546766 + AluSq SINE Alu 1 301 -12 2018 128 10 0 chr10 64043004 64043292 -81545996 + AluSg SINE Alu 1 291 -19 1652 171 28 3 chr10 64045023 64045146 -81544142 + AluJb SINE Alu 1 120 -192 357 24 0 0 chr10 64045146 64045188 -81544100 + (CAA)n Simple_repeat Simple_repeat 3 44 0 1652 171 28 3 chr10 64045188 64045350 -81543938 + AluJb SINE Alu 120 293 -19 309 300 31 8 chr10 64045940 64046070 -81543218 + L1ME LINE L1 5572 5704 -417 1868 146 29 4 chr10 64047394 64047675 -81541613 - AluSx SINE Alu -8 304 17 32 81 0 0 chr10 64047699 64047773 -81541515 + AT_rich Low_complexity Low_complexity 1 74 0 325 263 47 29 chr10 64047808 64047979 -81541309 - MER113 DNA MER1_type? -337 184 11 21 0 0 0 chr10 64048323 64048344 -81540944 + AT_rich Low_complexity Low_complexity 1 21 0 426 85 0 0 chr10 64049424 64049483 -81539805 + (TGG)n Simple_repeat Simple_repeat 1 59 0 468 0 0 0 chr10 64059674 64059726 -81529562 + (CA)n Simple_repeat Simple_repeat 2 53 0 21 36 0 0 chr10 64060122 64060150 -81529138 + AT_rich Low_complexity Low_complexity 1 28 0 230 250 0 0 chr10 64060300 64060348 -81528940 + GA-rich Low_complexity Low_complexity 1 48 0 1938 103 10 41 chr10 64061604 64061895 -81527393 - AluSx SINE Alu -30 282 1 604 126 9 18 chr10 64062240 64062351 -81526937 + HY1 scRNA scRNA 1 110 -2 2213 100 13 3 chr10 64064628 64064915 -81524373 + AluSg SINE Alu 1 293 -17 207 0 0 0 chr10 64064915 64064938 -81524350 + (TTAAA)n Simple_repeat Simple_repeat 3 25 0 2213 100 13 3 chr10 64064938 64064951 -81524337 + AluSg SINE Alu 293 304 -6 21 0 0 0 chr10 64065958 64065979 -81523309 + AT_rich Low_complexity Low_complexity 1 21 0 2555 56 3 0 chr10 64066110 64066414 -81522874 - AluSq SINE Alu -8 305 1 225 196 0 0 chr10 64067463 64067509 -81521779 + A-rich Low_complexity Low_complexity 1 46 0 2147 114 3 0 chr10 64068933 64069222 -81520066 - AluSp SINE Alu -21 292 3 21 82 0 0 chr10 64069324 64069373 -81519915 + AT_rich Low_complexity Low_complexity 1 49 0 507 33 0 0 chr10 64069959 64070020 -81519268 + (TG)n Simple_repeat Simple_repeat 2 62 0 365 334 59 44 chr10 64070389 64070540 -81518748 + L1MC/D LINE L1 4877 5024 -1122 2131 104 17 3 chr10 64070540 64070827 -81518461 + AluSg SINE Alu 1 291 -19 365 334 59 44 chr10 64070827 64071016 -81518272 + L1MC/D LINE L1 5024 5222 -924 359 251 88 77 chr10 64071064 64071407 -81517881 + L1MC/D LINE L1 5288 5636 -528 2043 111 17 3 chr10 64071416 64071704 -81517584 - AluSx SINE Alu -19 293 2 303 319 17 8 chr10 64071704 64071823 -81517465 + L1MC/D LINE L1 5704 5823 -1985 339 280 149 47 chr10 64071828 64072124 -81517164 - L2 LINE L2 0 3313 2988 2367 84 0 0 chr10 64072230 64072528 -81516760 - AluSc SINE Alu -11 298 1 2182 110 0 0 chr10 64073229 64073535 -81515753 - AluSx SINE Alu 0 306 1 1999 141 3 32 chr10 64074681 64074993 -81514295 - AluSx SINE Alu -9 303 1 1715 193 3 7 chr10 64075888 64076183 -81513105 - AluJo SINE Alu -18 294 1 22 0 0 0 chr10 64076186 64076208 -81513080 + AT_rich Low_complexity Low_complexity 1 22 0 2155 122 3 0 chr10 64076393 64076711 -81512577 + AluSx SINE Alu 1 319 0 263 291 134 24 chr10 64076991 64077118 -81512170 - MER5A DNA MER1_type -5 184 44 346 292 62 9 chr10 64077616 64077729 -81511559 - MIR3 SINE MIR -45 163 45 297 318 95 16 chr10 64078510 64078699 -81510589 + MIR SINE MIR 33 236 -26 29 28 0 0 chr10 64079163 64079199 -81510089 + AT_rich Low_complexity Low_complexity 1 36 0 310 326 123 44 chr10 64079788 64080015 -81509273 - L2 LINE L2 -1 3271 3027 198 0 0 0 chr10 64080736 64080758 -81508530 + (T)n Simple_repeat Simple_repeat 1 22 0 476 140 32 0 chr10 64081359 64081452 -81507836 - MER33 DNA MER1_type -2 322 227 644 158 35 18 chr10 64081452 64081566 -81507722 - FLAM_A SINE Alu -9 133 18 702 205 54 31 chr10 64081566 64081789 -81507499 - MER33 DNA MER1_type -252 72 1 402 339 76 0 chr10 64082675 64082793 -81506495 - MER91A DNA MER1_type -16 180 54 597 302 82 13 chr10 64082825 64083057 -81506231 - MIR SINE MIR -10 252 5 2320 77 7 10 chr10 64083455 64083752 -81505536 - AluSc SINE Alu -13 296 1 2077 123 27 0 chr10 64084382 64084715 -81504573 + L1PA13 LINE L1 5788 6129 -34 1032 82 0 0 chr10 64084754 64084931 -81504357 + AluSg/x SINE Alu 179 355 0 316 347 31 0 chr10 64084931 64085029 -81504259 + MIR SINE MIR 42 142 -66 499 231 69 52 chr10 64085282 64085455 -81503833 - MIR SINE MIR -1 261 86 300 153 97 14 chr10 64085532 64085604 -81503684 + L1MB7 LINE L1 6101 6178 -6 216 229 21 0 chr10 64086745 64086793 -81502495 - L2 LINE L2 0 3313 3265 24 32 0 0 chr10 64087664 64087695 -81501593 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr10 64088122 64088151 -81501137 + AT_rich Low_complexity Low_complexity 1 29 0 246 128 0 0 chr10 64088247 64088286 -81501002 + (CA)n Simple_repeat Simple_repeat 2 40 0 637 317 163 21 chr10 64088723 64089287 -81500001 - L2 LINE L2 -667 2647 2004 1263 119 72 20 chr10 64089310 64089561 -81499727 + L1MA5A LINE L1 6028 6291 -6 413 262 0 0 chr10 64089750 64089834 -81499454 + MIR SINE MIR 50 133 -75 310 200 0 0 chr10 64090509 64090569 -81498719 - L2 LINE L2 0 3272 3213 408 239 45 0 chr10 64091120 64091208 -81498080 + L2 LINE L2 3222 3313 0 539 239 29 7 chr10 64091796 64091934 -81497354 - Charlie8 DNA MER1_type -2142 275 135 184 284 24 79 chr10 64091989 64092116 -81497172 - L2 LINE L2 -4 3309 3190 245 308 0 0 chr10 64092268 64092333 -81496955 - MER5C DNA MER1_type -248 76 12 279 222 144 44 chr10 64092698 64092788 -81496500 + Charlie8 DNA MER1_type 1 99 -2318 636 274 85 0 chr10 64092915 64093127 -81496161 - MLT1I LTR MaLR -21 388 159 2210 98 0 10 chr10 64094100 64094395 -81494893 + AluSq SINE Alu 5 296 -17 205 279 44 0 chr10 64094602 64094670 -81494618 + L2 LINE L2 3237 3307 -6 517 252 31 8 chr10 64095394 64095521 -81493767 - L2 LINE L2 0 3313 3184 200 238 0 0 chr10 64096878 64096920 -81492368 + (TA)n Simple_repeat Simple_repeat 2 43 0 189 0 0 0 chr10 64097196 64097217 -81492071 + (T)n Simple_repeat Simple_repeat 1 21 0 324 264 46 0 chr10 64097504 64097591 -81491697 + MIR SINE MIR 152 242 -20 443 281 49 27 chr10 64097757 64097942 -81491346 - Charlie8 DNA MER1_type -2145 272 84 351 65 0 0 chr10 64099769 64099815 -81489473 + (T)n Simple_repeat Simple_repeat 1 46 0 1338 147 56 31 chr10 64100027 64100056 -81489232 + LTR45B LTR ERV1 3 30 -459 2441 71 0 0 chr10 64100056 64100351 -81488937 - AluY SINE Alu -16 295 1 1338 147 56 31 chr10 64100351 64100712 -81488576 + LTR45B LTR ERV1 30 444 -45 322 233 35 35 chr10 64100828 64100914 -81488374 + MIR3 SINE MIR 91 176 -32 2333 104 0 19 chr10 64102103 64102419 -81486869 - AluSx SINE Alu -2 310 1 2200 96 0 47 chr10 64103129 64103451 -81485837 + AluSx SINE Alu 1 307 -5 596 243 15 7 chr10 64103733 64103869 -81485419 + MER5B DNA MER1_type 1 137 -41 2119 122 6 10 chr10 64104005 64104317 -81484971 - AluSx SINE Alu -1 311 1 301 271 29 0 chr10 64104318 64104388 -81484900 - MER5A DNA MER1_type -113 76 5 218 322 0 0 chr10 64104671 64104730 -81484558 + CT-rich Low_complexity Low_complexity 2 60 0 485 245 45 115 chr10 64105039 64105142 -81484146 - MIR SINE MIR -44 218 134 2138 121 0 31 chr10 64105142 64105464 -81483824 - AluSx SINE Alu 0 312 1 485 245 45 115 chr10 64105464 64105560 -81483728 - MIR SINE MIR -128 134 33 1102 92 7 0 chr10 64105619 64105761 -81483527 + AluSp SINE Alu 1 143 -170 49 52 0 0 chr10 64105761 64105838 -81483450 + AT_rich Low_complexity Low_complexity 1 77 0 2443 83 0 3 chr10 64106335 64106647 -81482641 - AluY SINE Alu 0 311 1 971 313 157 23 chr10 64106658 64107226 -81482062 + L2 LINE L2 2111 2754 -560 277 26 51 0 chr10 64107257 64107296 -81481992 - L1PA13 LINE L1 -14 6149 6109 * 4671 120 20 21 chr10 64107285 64108026 -81481262 - L1PA14 LINE L1 -74 6087 5346 2156 129 10 0 chr10 64108026 64108328 -81480960 + AluSx SINE Alu 1 305 -7 4671 120 20 21 chr10 64108328 64108387 -81480901 - L1PA14 LINE L1 -815 5346 5288 752 171 32 0 chr10 64108385 64108543 -81480745 + L1PA14 LINE L1 5121 5283 -863 * 197 300 0 0 chr10 64108549 64108599 -81480689 + L2 LINE L2 2764 2813 -501 620 360 72 30 chr10 64108739 64109100 -81480188 + L2 LINE L2 2897 3272 0 536 315 68 32 chr10 64109500 64109751 -81479537 + MIR SINE MIR 3 262 0 404 308 28 47 chr10 64109776 64109987 -81479301 + MIR SINE MIR 6 212 -50 458 333 14 34 chr10 64111012 64111219 -81478069 + L2 LINE L2 2588 2790 -524 323 287 64 11 chr10 64111222 64111316 -81477972 + L2 LINE L2 2987 3085 -187 692 290 43 5 chr10 64111325 64111532 -81477756 + MIR SINE MIR 28 242 -20 209 283 10 61 chr10 64111671 64111770 -81477518 + MIR3 SINE MIR 108 201 -7 193 308 62 0 chr10 64115208 64115273 -81474015 + L3b LINE CR1 1423 1491 -92 2480 50 0 3 chr10 64116720 64117018 -81472270 - AluY SINE Alu -14 297 1 1276 144 10 0 chr10 64118367 64118575 -81470713 + MER2 DNA MER2_type 1 210 -135 344 303 46 9 chr10 64118667 64118776 -81470512 + MIR3 SINE MIR 14 126 -82 2298 91 0 0 chr10 64119220 64119506 -81469782 + AluSc SINE Alu 3 288 -21 201 74 0 0 chr10 64121568 64121595 -81467693 + (T)n Simple_repeat Simple_repeat 1 27 0 201 74 0 0 chr10 64121691 64121718 -81467570 + (TG)n Simple_repeat Simple_repeat 2 28 0 1657 89 133 12 chr10 64121990 64122259 -81467029 + AluSg1 SINE Alu 1 299 0 26 50 0 0 chr10 64124987 64125027 -81464261 + AT_rich Low_complexity Low_complexity 1 40 0 260 238 209 19 chr10 64125201 64125306 -81463982 + MIR SINE MIR 19 143 -65 2253 111 3 0 chr10 64126099 64126397 -81462891 + AluSx SINE Alu 1 299 -13 1464 187 55 14 chr10 64126653 64126942 -81462346 + AluJb SINE Alu 1 301 -11 1864 116 0 4 chr10 64128667 64128918 -81460370 - AluSx SINE Alu -14 298 49 21 0 0 0 chr10 64129067 64129088 -81460200 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr10 64130200 64130237 -81459051 + AT_rich Low_complexity Low_complexity 1 37 0 2209 110 0 7 chr10 64131895 64132195 -81457093 + AluSx SINE Alu 1 298 -14 300 333 39 61 chr10 64134741 64135053 -81454235 + L1ME LINE L1 902 1206 -5210 392 289 60 42 chr10 64135086 64135327 -81453961 + L1ME LINE L1 1150 1563 -5044 314 333 17 25 chr10 64135430 64135550 -81453738 + HAL1 LINE L1 330 448 -2059 674 260 210 25 chr10 64135567 64136044 -81453244 + HAL1 LINE L1 517 1081 -1426 2496 262 92 28 chr10 64136085 64136936 -81452352 + HAL1 LINE L1 1167 2127 -380 2309 78 20 3 chr10 64136936 64137231 -81452057 + AluSx SINE Alu 1 300 -12 2496 262 92 28 chr10 64137231 64137639 -81451649 + HAL1 LINE L1 2127 2507 0 2023 145 0 25 chr10 64138881 64139199 -81450089 + AluSx SINE Alu 1 310 -2 5988 134 14 36 chr10 64139212 64140810 -81448478 + L1MA3 LINE L1 4509 6063 -242 1771 176 7 0 chr10 64140810 64141106 -81448182 + AluJb SINE Alu 1 298 -14 5988 134 14 36 chr10 64141106 64141339 -81447949 + L1MA3 LINE L1 6063 6300 -5 281 329 35 0 chr10 64141939 64142024 -81447264 + MIR SINE MIR 60 147 -115 207 207 12 98 chr10 64142465 64142547 -81446741 - MIR SINE MIR -119 143 69 280 339 58 17 chr10 64143324 64143498 -81445790 + MIR SINE MIR 36 216 -46 2035 110 3 57 chr10 64143556 64143874 -81445414 - AluSx SINE Alu -11 301 1 374 268 77 73 chr10 64144129 64144352 -81444936 + MIR SINE MIR 8 234 -28 21 0 0 0 chr10 64144508 64144529 -81444759 + AT_rich Low_complexity Low_complexity 1 21 0 2220 129 0 6 chr10 64145805 64146116 -81443172 + AluSx SINE Alu 3 311 -1 481 290 70 58 chr10 64146491 64146750 -81442538 - MLT1K LTR MaLR -243 345 84 236 342 35 9 chr10 64146983 64147097 -81442191 - L3 LINE CR1 -308 1269 1153 2251 95 3 0 chr10 64147100 64147396 -81441892 - AluY SINE Alu -14 297 1 747 238 79 9 chr10 64147670 64147767 -81441521 + MIR SINE MIR 16 105 -157 2362 109 0 3 chr10 64147767 64148078 -81441210 - AluSx SINE Alu 0 312 3 747 238 79 9 chr10 64148078 64148194 -81441094 + MIR SINE MIR 105 244 -18 353 302 119 0 chr10 64148597 64148756 -81440532 + MER5B DNA MER1_type 1 178 0 221 231 385 0 chr10 64148765 64148869 -81440419 + MER5B DNA MER1_type 1 144 -34 2038 129 0 7 chr10 64148869 64149149 -81440139 + AluSx SINE Alu 1 280 -32 228 35 0 0 chr10 64149149 64149178 -81440110 + (CA)n Simple_repeat Simple_repeat 1 29 0 352 300 90 5 chr10 64150298 64150498 -81438790 - L1MC4 LINE L1 -4 8038 7822 290 192 0 26 chr10 64151160 64151238 -81438050 + (TGG)n Simple_repeat Simple_repeat 1 76 0 2633 82 31 8 chr10 64151651 64152007 -81437281 + THE1B LTR MaLR 1 364 0 2196 113 10 0 chr10 64152022 64152315 -81436973 - AluSx SINE Alu -16 296 1 2084 110 28 0 chr10 64153040 64153330 -81435958 + AluSx SINE Alu 1 298 -14 2951 200 28 0 chr10 64154538 64155079 -81434209 + REP3 LTR ERV 5 560 -2 612 193 222 0 chr10 64155600 64155771 -81433517 + MER3 DNA MER1_type 1 209 0 198 118 0 0 chr10 64156630 64156664 -81432624 + (CACAT)n Simple_repeat Simple_repeat 1 34 0 210 219 0 0 chr10 64156774 64156838 -81432450 + A-rich Low_complexity Low_complexity 1 64 0 225 0 0 0 chr10 64160961 64160986 -81428302 + (T)n Simple_repeat Simple_repeat 1 25 0 435 280 11 46 chr10 64162261 64162436 -81426852 + MIR SINE MIR 45 213 -49 338 278 54 32 chr10 64163072 64163328 -81425960 + MLT1H1 LTR MaLR 25 287 -292 252 170 0 0 chr10 64163339 64163392 -81425896 + GA-rich Low_complexity Low_complexity 2 54 0 284 278 162 34 chr10 64163396 64163630 -81425658 + MLT1H1 LTR MaLR 292 555 0 555 297 108 9 chr10 64164908 64165130 -81424158 - MIR SINE MIR -7 255 12 576 100 118 27 chr10 64165193 64165303 -81423985 + L2 LINE L2 3193 3312 -1 1184 130 0 0 chr10 64165715 64165892 -81423396 - L1PA15 LINE L1 -24 6141 5965 2045 122 31 0 chr10 64165892 64166178 -81423110 - AluSx SINE Alu -16 296 2 2748 100 29 9 chr10 64166894 64167314 -81421974 + MSTA LTR MaLR 1 428 0 2326 93 0 0 chr10 64169106 64169407 -81419881 - AluSx SINE Alu -11 301 1 2567 135 19 9 chr10 64169887 64170309 -81418979 + MSTB LTR MaLR 1 426 0 216 293 152 10 chr10 64170342 64170441 -81418847 + MIR SINE MIR 48 160 -102 225 328 0 0 chr10 64170543 64170607 -81418681 - MIR SINE MIR -3 259 196 1146 135 68 144 chr10 64170616 64170956 -81418332 + MSTB1 LTR MaLR 4 317 -115 693 103 0 9 chr10 64171022 64171129 -81418159 + MSTB1 LTR MaLR 322 427 -5 635 303 41 1 chr10 64171202 64171402 -81417886 + MIR SINE MIR 40 245 -17 963 239 9 18 chr10 64171619 64171845 -81417443 + MER58A DNA MER1_type 1 224 0 358 239 9 64 chr10 64172145 64172254 -81417034 - L1ME3 LINE L1 -90 6072 5970 800 274 57 0 chr10 64172343 64172591 -81416697 + L1ME3A LINE L1 5608 5869 -301 835 270 118 32 chr10 64172595 64173028 -81416260 - L2 LINE L2 -561 2753 2284 255 305 61 0 chr10 64173373 64173455 -81415833 - L2 LINE L2 -14 3299 3213 2167 109 7 3 chr10 64173913 64174206 -81415082 + AluSx SINE Alu 3 296 -16 2117 247 26 7 chr10 64174404 64174950 -81414338 + L1MA4 LINE L1 13 568 -6997 2052 151 43 34 chr10 64174952 64175497 -81413791 + MLT2A2 LTR ERVL 1 554 0 3113 255 35 18 chr10 64175515 64176421 -81412867 + L1MA4 LINE L1 598 2201 -5364 303 314 44 20 chr10 64176437 64176689 -81412599 - AluSq SINE Alu -3 300 43 6154 187 31 7 chr10 64176911 64178301 -81410987 + L1MA4 LINE L1 4347 5769 -1796 4287 131 16 44 chr10 64178302 64179099 -81410189 + L1MA4 LINE L1 6931 7705 -14 567 112 0 0 chr10 64179266 64179355 -81409933 + HY3 scRNA scRNA 13 101 0 205 206 16 16 chr10 64180129 64180192 -81409096 + CT-rich Low_complexity Low_complexity 3 65 0 266 282 14 0 chr10 64180630 64180701 -81408587 + GA-rich Low_complexity Low_complexity 3 74 0 34 65 0 0 chr10 64180721 64180783 -81408505 + AT_rich Low_complexity Low_complexity 1 62 0 888 322 130 54 chr10 64181226 64181896 -81407392 + L3 LINE CR1 851 1571 -6 21 0 0 0 chr10 64184416 64184437 -81404851 + AT_rich Low_complexity Low_complexity 1 21 0 183 42 0 0 chr10 64184709 64184733 -81404555 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 3544 134 100 166 chr10 64184957 64185092 -81404196 - L1MC3 LINE L1 -1 7784 7642 2150 109 0 0 chr10 64185092 64185377 -81403911 - AluSx SINE Alu -27 285 1 3544 134 100 166 chr10 64185377 64185603 -81403685 - L1MC3 LINE L1 -143 7642 7403 5314 83 16 7 chr10 64185603 64186335 -81402953 - L1PA10 LINE L1 -13 6155 5417 3544 134 100 166 chr10 64186335 64186625 -81402663 - L1MC3 LINE L1 -382 7403 7095 303 286 0 0 chr10 64186625 64186709 -81402579 - MLT1F1 LTR MaLR -442 125 42 3544 134 100 166 chr10 64186709 64187142 -81402146 - L1MC3 LINE L1 -690 7095 6692 22 0 0 0 chr10 64190241 64190263 -81399025 + AT_rich Low_complexity Low_complexity 1 22 0 195 129 0 0 chr10 64190913 64190944 -81398344 + (TG)n Simple_repeat Simple_repeat 2 32 0 26 30 0 0 chr10 64191658 64191691 -81397597 + AT_rich Low_complexity Low_complexity 1 33 0 1799 133 65 0 chr10 64191792 64192071 -81397217 - AluJb SINE Alu -15 297 1 323 244 41 77 chr10 64192092 64192301 -81396987 + L2 LINE L2 2729 2921 -351 714 261 72 5 chr10 64192787 64192994 -81396294 + MIR SINE MIR 13 233 -29 275 196 0 0 chr10 64193013 64193059 -81396229 + MIR SINE MIR 207 252 -10 1515 144 20 106 chr10 64193102 64193450 -81395838 + AluYb8 SINE Alu 1 318 0 2091 127 13 3 chr10 64193531 64193838 -81395450 + AluSq SINE Alu 1 310 -3 770 313 151 45 chr10 64193880 64194645 -81394643 + L2 LINE L2 1633 2544 -770 2098 67 0 11 chr10 64194645 64194914 -81394374 - AluY SINE Alu -8 303 38 770 313 151 45 chr10 64194914 64195218 -81394070 + L2 LINE L2 2544 2815 -499 861 234 36 9 chr10 64195358 64195580 -81393708 + MIR SINE MIR 32 259 -3 201 362 0 0 chr10 64195617 64195664 -81393624 + L2 LINE L2 3140 3186 -86 27 0 0 0 chr10 64196080 64196107 -81393181 + AT_rich Low_complexity Low_complexity 1 27 0 1874 149 49 0 chr10 64196464 64196752 -81392536 + AluSx SINE Alu 1 302 -10 2404 87 0 7 chr10 64197454 64197764 -81391524 + AluSc SINE Alu 1 308 -1 1471 160 40 20 chr10 64198709 64198959 -81390329 + AluSx SINE Alu 39 293 -19 316 308 71 38 chr10 64199013 64199224 -81390064 - L1MC5 LINE L1 -48 7913 7696 196 360 79 0 chr10 64200391 64200480 -81388808 + L2 LINE L2 3125 3220 -52 28 29 0 0 chr10 64200553 64200588 -81388700 + AT_rich Low_complexity Low_complexity 1 35 0 2332 94 3 0 chr10 64200715 64201012 -81388276 + AluSp SINE Alu 1 298 -15 22 0 0 0 chr10 64202281 64202303 -81386985 + AT_rich Low_complexity Low_complexity 1 22 0 372 301 72 0 chr10 64202496 64202649 -81386639 - MIR SINE MIR -49 213 50 753 234 0 18 chr10 64203486 64203653 -81385635 - FRAM SINE Alu -2 164 1 233 232 0 0 chr10 64203682 64203738 -81385550 - L1ME LINE L1 -379 5742 5687 2370 53 3 0 chr10 64204267 64204593 -81384695 - AluY SINE Alu 0 327 1 735 183 0 0 chr10 64206350 64206470 -81382818 + FLAM_A SINE Alu 1 120 -13 287 115 33 0 chr10 64206477 64206538 -81382750 + (CAGAGA)n Simple_repeat Simple_repeat 2 64 0 180 0 0 0 chr10 64207558 64207578 -81381710 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 3629 170 19 20 chr10 64207811 64209021 -81380267 + L1PB4 LINE L1 4579 5780 -376 2050 100 52 0 chr10 64209040 64209330 -81379958 - AluSg SINE Alu -5 305 1 246 125 0 0 chr10 64209330 64209370 -81379918 - L1P5 LINE L1 -322 5829 5790 194 170 0 21 chr10 64209441 64209488 -81379800 + (TATATG)n Simple_repeat Simple_repeat 2 47 0 221 296 25 0 chr10 64209553 64209634 -81379654 + (CATA)n Simple_repeat Simple_repeat 3 85 0 2093 138 29 0 chr10 64209634 64209975 -81379313 + L1PB4 LINE L1 5789 6139 -17 1879 136 8 0 chr10 64210514 64210778 -81378510 + AluSx SINE Alu 2 267 -45 3417 144 54 5 chr10 64211480 64212096 -81377192 + L1MB2 LINE L1 5524 6169 -2 1394 201 49 17 chr10 64212104 64212392 -81376896 + AluJo SINE Alu 1 297 -15 26 0 0 0 chr10 64212396 64212422 -81376866 + AT_rich Low_complexity Low_complexity 1 26 0 389 284 154 15 chr10 64212476 64212677 -81376611 + MIR SINE MIR 9 237 -25 212 260 115 39 chr10 64212976 64213080 -81376208 - L2 LINE L2 0 3313 3202 2460 62 3 13 chr10 64215019 64215324 -81373964 - AluY SINE Alu -9 302 1 238 294 0 0 chr10 64216091 64216142 -81373146 + L2 LINE L2 3214 3264 -8 21 104 0 0 chr10 64216702 64216779 -81372509 + AT_rich Low_complexity Low_complexity 1 77 0 261 109 0 43 chr10 64216970 64217016 -81372272 - MADE1 DNA Mariner -36 44 1 2240 101 10 0 chr10 64217382 64217678 -81371610 - AluSg SINE Alu -11 299 1 1420 266 98 64 chr10 64217971 64219151 -81370137 + L1MEc LINE L1 789 2008 -4388 328 144 36 36 chr10 64219170 64219309 -81369979 + (TTATA)n Simple_repeat Simple_repeat 5 143 0 544 46 0 92 chr10 64219328 64219481 -81369807 + (TA)n Simple_repeat Simple_repeat 1 139 0 380 175 19 39 chr10 64219482 64219585 -81369703 + (TTATA)n Simple_repeat Simple_repeat 5 105 0 354 54 48 77 chr10 64219590 64219758 -81369530 + (TA)n Simple_repeat Simple_repeat 1 163 0 6744 98 8 1 chr10 64219860 64222352 -81366936 + L1PA8A LINE L1 3514 6103 -28 1831 201 181 31 chr10 64222402 64223152 -81366136 + Charlie2 DNA MER1_type 1999 2861 -1 449 288 56 20 chr10 64224328 64224526 -81364762 + L2 LINE L2 2554 2758 -556 360 242 134 64 chr10 64224597 64224911 -81364377 - HAL1 LINE L1 -1319 1188 853 919 252 64 13 chr10 64225154 64225388 -81363900 - MIR SINE MIR 0 262 17 498 294 67 39 chr10 64225445 64225714 -81363574 - HAL1 LINE L1 -1991 516 233 828 239 29 5 chr10 64225714 64225919 -81363369 - MER63A DNA MER1_type 0 210 1 498 294 67 39 chr10 64225919 64226009 -81363279 - HAL1 LINE L1 -2274 233 147 243 302 94 0 chr10 64226083 64226189 -81363099 - HAL1 LINE L1 -2391 116 1 539 295 153 33 chr10 64226230 64226660 -81362628 + L2 LINE L2 2826 3307 -6 184 337 109 22 chr10 64227208 64227300 -81361988 - L2 LINE L2 -15 3257 3158 696 182 8 23 chr10 64228119 64228251 -81361037 + FLAM_C SINE Alu 10 139 -4 2322 91 0 0 chr10 64230289 64230576 -81358712 - AluSq SINE Alu -26 287 1 1053 236 28 0 chr10 64231269 64231481 -81357807 + MER20 DNA MER1_type 2 219 0 187 258 155 21 chr10 64232026 64232123 -81357165 + L2 LINE L2 3197 3306 -7 2114 95 0 11 chr10 64233154 64233437 -81355851 - AluSg SINE Alu -30 280 1 24 32 0 0 chr10 64233602 64233633 -81355655 + AT_rich Low_complexity Low_complexity 1 31 0 1724 183 3 10 chr10 64233639 64233945 -81355343 + AluJo SINE Alu 1 304 -8 207 214 11 45 chr10 64235766 64235855 -81353433 + T-rich Low_complexity Low_complexity 5 90 0 2291 66 10 17 chr10 64237077 64237378 -81351910 - AluY SINE Alu -12 299 1 1919 171 29 24 chr10 64237778 64238199 -81351089 + L1MB3 LINE L1 5703 6125 -58 28 29 0 0 chr10 64239469 64239504 -81349784 + AT_rich Low_complexity Low_complexity 1 35 0 986 107 13 0 chr10 64240253 64240412 -81348876 + L1P4 LINE L1 5351 5511 -655 329 270 95 61 chr10 64241432 64241728 -81347560 - L1MCa LINE L1 -5039 1902 1597 1225 251 120 17 chr10 64241845 64242328 -81346960 - L1MCa LINE L1 -5107 1316 784 336 241 11 0 chr10 64242334 64242421 -81346867 - L1ME LINE L1 -517 5604 5517 448 264 82 31 chr10 64242758 64242917 -81346371 + MIR SINE MIR 25 191 -71 740 22 0 0 chr10 64243028 64243117 -81346171 + L1PA3 LINE L1 6064 6152 -3 21 0 0 0 chr10 64243117 64243138 -81346150 + AT_rich Low_complexity Low_complexity 1 21 0 1169 172 18 31 chr10 64243707 64243934 -81345354 + MER58A DNA MER1_type 1 224 0 984 249 53 60 chr10 64244125 64244707 -81344581 + L1MC5 LINE L1 7336 7913 -48 352 261 43 36 chr10 64244779 64244917 -81344371 + MIR SINE MIR 123 261 -1 851 170 0 15 chr10 64245038 64245173 -81344115 + FLAM_A SINE Alu 1 133 0 182 114 0 29 chr10 64245746 64245781 -81343507 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 1694 213 50 26 chr10 64245886 64246341 -81342947 - MER31B LTR ERV1 0 466 1 221 386 0 23 chr10 64247625 64247713 -81341575 + MIR SINE MIR 57 142 -66 431 206 31 77 chr10 64247745 64247939 -81341349 + L1MC5 LINE L1 7740 7924 -37 2269 109 3 6 chr10 64247963 64248276 -81341012 + AluSq SINE Alu 1 312 -1 2882 134 50 19 chr10 64248462 64249056 -81340232 - MER4B LTR ERV1 -2 777 1 256 213 160 60 chr10 64249763 64249913 -81339375 + Charlie2 DNA MER1_type 159 323 -2539 278 244 35 0 chr10 64249951 64250037 -81339251 + Charlie2 DNA MER1_type 1922 2010 -852 8157 173 16 33 chr10 64250052 64251830 -81337458 + L1P LINE L1 1147 2895 -3251 1959 83 0 15 chr10 64252109 64252375 -81336913 - AluY SINE Alu -8 303 42 1072 80 0 0 chr10 64252508 64252646 -81336642 - L1PA10 LINE L1 -15 6153 6016 324 254 69 84 chr10 64253613 64253804 -81335484 - MIR SINE MIR -45 217 24 268 321 0 12 chr10 64253986 64254067 -81335221 - L2 LINE L2 0 3313 3234 200 323 16 0 chr10 64254716 64254778 -81334510 + L2 LINE L2 3251 3313 0 2074 110 0 4 chr10 64255663 64255944 -81333344 - AluSg SINE Alu -30 280 1 259 305 99 34 chr10 64256347 64256690 -81332598 + L1ME LINE L1 5328 5699 -422 22 35 0 0 chr10 64256995 64257024 -81332264 + AT_rich Low_complexity Low_complexity 1 29 0 790 234 23 0 chr10 64257136 64257307 -81331981 + FAM SINE Alu 1 175 0 231 368 0 0 chr10 64258375 64258443 -81330845 - L2 LINE L2 -1 3271 3204 1063 169 101 62 chr10 64259987 64260325 -81328963 + L1MA7 LINE L1 5941 6291 0 1905 146 37 0 chr10 64260649 64260944 -81328344 - AluSx SINE Alu -6 306 1 270 246 220 21 chr10 64264108 64264333 -81324955 + MIR SINE MIR 2 235 -27 2709 150 5 2 chr10 64264358 64264785 -81324503 - MSTA LTR MaLR 0 428 1 391 264 141 18 chr10 64264982 64265145 -81324143 - MIR SINE MIR -72 190 8 3666 136 53 5 chr10 64268211 64268813 -81320475 + L1PA16 LINE L1 5525 6155 -11 23 0 0 0 chr10 64269492 64269515 -81319773 + AT_rich Low_complexity Low_complexity 1 23 0 374 202 79 0 chr10 64269523 64269612 -81319676 - MER3 DNA MER1_type -105 104 9 185 206 16 48 chr10 64269878 64269941 -81319347 - MIR SINE MIR -22 240 180 21 71 0 0 chr10 64270136 64270178 -81319110 + AT_rich Low_complexity Low_complexity 1 42 0 353 306 25 33 chr10 64270293 64270414 -81318874 + L2 LINE L2 3153 3272 0 1015 214 95 22 chr10 64270996 64271313 -81317975 - MER2 DNA MER2_type -4 340 1 238 323 128 15 chr10 64271928 64272061 -81317227 + MIR3 SINE MIR 2 149 -59 446 287 101 42 chr10 64272161 64272398 -81316890 + MIR SINE MIR 5 255 -7 390 211 122 16 chr10 64273742 64273865 -81315423 + MER20B DNA MER1_type 43 178 -605 259 272 224 7 chr10 64274153 64274300 -81314988 - MIR SINE MIR -26 236 58 2425 78 0 3 chr10 64274643 64274949 -81314339 + AluY SINE Alu 1 305 -6 321 262 0 37 chr10 64274998 64275124 -81314164 - MER5A DNA MER1_type -56 133 1 543 299 123 0 chr10 64276491 64276702 -81312586 + MIR SINE MIR 20 256 -6 3193 167 42 30 chr10 64276929 64277342 -81311946 + L1MB2 LINE L1 5452 5879 -292 2007 137 3 26 chr10 64277342 64277655 -81311633 + AluSx SINE Alu 1 306 -6 3193 167 42 30 chr10 64277655 64277949 -81311339 + L1MB2 LINE L1 5879 6168 -3 2214 109 0 7 chr10 64277992 64278294 -81310994 + AluY SINE Alu 1 300 -11 2106 147 0 0 chr10 64279023 64279335 -81309953 - AluSx SINE Alu 0 312 1 1506 193 39 14 chr10 64279617 64279974 -81309314 + L1MB7 LINE L1 5811 6176 -8 2664 33 0 0 chr10 64280116 64280420 -81308868 - AluY SINE Alu -7 304 1 295 232 32 53 chr10 64281607 64281702 -81307586 - MIR SINE MIR 0 262 170 1122 150 146 42 chr10 64281705 64282063 -81307225 - MSTC LTR MaLR 0 428 1 614 237 105 7 chr10 64282070 64282222 -81307066 - MIR SINE MIR -94 168 2 314 237 10 62 chr10 64282452 64282549 -81306739 + MIR SINE MIR 121 212 -50 182 339 27 27 chr10 64282573 64282685 -81306603 - MIR SINE MIR -65 197 86 412 309 79 34 chr10 64284335 64284752 -81304536 - L1M4 LINE L1 -858 5288 4853 365 273 10 67 chr10 64285214 64285408 -81303880 + L1ME LINE L1 5636 5818 -303 793 234 35 0 chr10 64286771 64286942 -81302346 + MER5A DNA MER1_type 1 177 -12 245 228 38 13 chr10 64287191 64287270 -81302018 - HAL1b LINE L1 -464 884 804 502 240 96 0 chr10 64287743 64287889 -81301399 + MER103 DNA DNA 6 165 -1 186 268 73 89 chr10 64288540 64288663 -81300625 + L2 LINE L2 3183 3303 -10 211 394 35 28 chr10 64288972 64289114 -81300174 - L2 LINE L2 -3 3269 3127 736 319 28 12 chr10 64289680 64289931 -81299357 + MIR SINE MIR 2 256 -6 2000 155 0 3 chr10 64290011 64290321 -81298967 + AluSx SINE Alu 1 309 -3 563 224 0 0 chr10 64290345 64290443 -81298845 + FRAM SINE Alu 21 118 -58 536 157 0 11 chr10 64290481 64290570 -81298718 - MER5A DNA MER1_type 0 189 102 279 191 0 0 chr10 64290583 64290630 -81298658 + Alu SINE Alu 245 291 -10 187 179 45 90 chr10 64290635 64290702 -81298586 + MIR SINE MIR 151 214 -48 279 323 165 13 chr10 64290703 64290861 -81298427 + MER91B DNA MER1_type 1 182 -8 1016 134 0 13 chr10 64292259 64292416 -81296872 + MER5A DNA MER1_type 13 167 -22 240 260 90 40 chr10 64292949 64293049 -81296239 + L2 LINE L2 3205 3309 -4 312 27 0 0 chr10 64294121 64294158 -81295130 + (TAGA)n Simple_repeat Simple_repeat 1 37 0 579 251 36 24 chr10 64294779 64294946 -81294342 + MIR SINE MIR 28 196 -66 5456 55 6 0 chr10 64296882 64297570 -81291718 + L1PA7 LINE L1 5461 6152 -2 3773 174 28 43 chr10 64297757 64298014 -81291274 - L1MA9 LINE L1 -253 6059 5800 315 71 0 0 chr10 64298014 64298056 -81291232 + (CA)n Simple_repeat Simple_repeat 2 43 0 3773 174 28 43 chr10 64298056 64299202 -81290086 - L1MA9 LINE L1 -512 5800 4680 400 264 174 6 chr10 64299312 64299479 -81289809 + MIR SINE MIR 67 261 -1 378 197 0 0 chr10 64299520 64299596 -81289692 + MER116 DNA Mariner 5 80 0 510 216 13 138 chr10 64299697 64299929 -81289359 + L2 LINE L2 3107 3309 -4 2127 122 3 13 chr10 64300207 64300510 -81288778 + AluSx SINE Alu 1 300 -12 717 218 0 0 chr10 64300517 64300682 -81288606 + (TG)n Simple_repeat Simple_repeat 2 166 0 368 200 0 32 chr10 64300675 64300800 -81288488 + (CATATA)n Simple_repeat Simple_repeat 5 125 0 * 1748 165 36 20 chr10 64304920 64305223 -81284065 - AluJo SINE Alu -4 308 1 188 311 216 0 chr10 64305241 64305315 -81283973 + L2 LINE L2 3173 3262 -10 31 0 0 0 chr10 64305399 64305430 -81283858 + AT_rich Low_complexity Low_complexity 1 31 0 1165 148 41 41 chr10 64306008 64306298 -81282990 + Charlie1 DNA MER1_type 2472 2761 0 852 298 16 4 chr10 64306490 64306738 -81282550 - MIR SINE MIR -10 252 2 186 43 0 0 chr10 64307184 64307207 -81282081 + (TCTA)n Simple_repeat Simple_repeat 2 24 0 21 0 0 0 chr10 64307231 64307252 -81282036 + AT_rich Low_complexity Low_complexity 1 21 0 280 310 181 0 chr10 64308323 64308443 -81280845 + MIR SINE MIR 14 137 -71 2205 106 10 3 chr10 64308917 64309220 -81280068 + AluSx SINE Alu 1 305 -7 1300 199 76 21 chr10 64309913 64310204 -81279084 + AluJb SINE Alu 1 307 -5 1630 150 84 4 chr10 64312236 64312510 -81276778 + AluJb SINE Alu 1 296 -16 241 240 20 0 chr10 64312511 64312561 -81276727 + polypurine Low_complexity Low_complexity 5 55 0 476 113 0 25 chr10 64312581 64312661 -81276627 + FLAM_C SINE Alu 58 135 -8 342 0 0 0 chr10 64312998 64313036 -81276252 + (TG)n Simple_repeat Simple_repeat 2 39 0 393 259 50 124 chr10 64314169 64314428 -81274860 + MIR SINE MIR 20 259 -3 790 308 35 62 chr10 64314768 64315222 -81274066 + L1MEd LINE L1 268 709 -5410 726 294 65 31 chr10 64315227 64315611 -81273677 + L1ME3A LINE L1 5543 5939 -231 200 279 132 58 chr10 64316347 64316537 -81272751 - L2 LINE L2 -1253 2061 1858 458 265 148 30 chr10 64316636 64316866 -81272422 - MIR SINE MIR -4 258 2 233 250 18 0 chr10 64317301 64317357 -81271931 + (TGAA)n Simple_repeat Simple_repeat 3 59 0 775 244 98 27 chr10 64317406 64317550 -81271738 + MIR SINE MIR 7 174 -88 1547 221 103 7 chr10 64317550 64317976 -81271312 - MLT1C LTR MaLR 0 467 1 775 244 98 27 chr10 64317976 64318056 -81271232 + MIR SINE MIR 174 247 -15 291 303 0 13 chr10 64318856 64318932 -81270356 + L2 LINE L2 3225 3299 -14 275 265 12 24 chr10 64320275 64320358 -81268930 - L2 LINE L2 0 3272 3191 985 183 67 24 chr10 64320478 64320686 -81268602 + MER20 DNA MER1_type 1 217 -2 194 281 73 12 chr10 64321056 64321138 -81268150 - L2 LINE L2 -181 3091 3005 1831 133 18 0 chr10 64321581 64321860 -81267428 + AluJo SINE Alu 14 297 -15 1701 129 20 4 chr10 64323290 64323545 -81265743 + AluSx SINE Alu 35 293 -19 1409 201 22 11 chr10 64327655 64327933 -81261355 + AluJo SINE Alu 1 281 -31 2441 121 22 0 chr10 64327933 64328288 -81261000 - THE1B LTR MaLR -1 363 1 1296 178 58 7 chr10 64328329 64328604 -81260684 + L1MB7 LINE L1 5896 6184 0 2068 125 0 3 chr10 64329153 64329473 -81259815 + AluSc SINE Alu 5 323 0 324 0 0 0 chr10 64329801 64329837 -81259451 + (CA)n Simple_repeat Simple_repeat 1 36 0 1443 176 3 85 chr10 64330421 64330751 -81258537 + AluJo SINE Alu 1 303 -9 21 0 0 0 chr10 64331012 64331033 -81258255 + AT_rich Low_complexity Low_complexity 1 21 0 2238 70 18 0 chr10 64331482 64331766 -81257522 + AluY SINE Alu 3 291 -20 207 340 96 19 chr10 64332488 64332644 -81256644 - MER5B DNA MER1_type -10 168 1 461 254 114 58 chr10 64333078 64333249 -81256039 + L1ME4a LINE L1 5651 5811 -310 14205 87 20 1 chr10 64333249 64336015 -81253273 + L1PA7 LINE L1 3359 6150 -4 461 254 114 58 chr10 64336015 64336212 -81253076 + L1ME4a LINE L1 5811 6038 -83 21 0 0 0 chr10 64336307 64336328 -81252960 + AT_rich Low_complexity Low_complexity 1 21 0 494 310 49 0 chr10 64336730 64336872 -81252416 - L3b LINE CR1 -157 1426 1278 806 52 0 0 chr10 64337962 64338058 -81251230 + L1PA10 LINE L1 6058 6153 -15 2119 61 0 11 chr10 64338191 64338455 -81250833 + AluY SINE Alu 42 302 -9 239 275 38 25 chr10 64338527 64338607 -81250681 + MIR SINE MIR 124 204 -58 227 340 0 0 chr10 64338620 64338720 -81250568 - L2 LINE L2 -133 3180 3081 1454 192 65 0 chr10 64338742 64339003 -81250285 + AluSx SINE Alu 1 278 -34 2616 55 3 0 chr10 64339120 64339430 -81249858 + AluY SINE Alu 1 311 0 483 272 38 96 chr10 64339555 64339816 -81249472 - MIR SINE MIR 0 262 17 278 191 34 56 chr10 64341313 64341402 -81247886 + Charlie8 DNA MER1_type 82 168 -2249 254 294 83 18 chr10 64341816 64341925 -81247363 + MIR SINE MIR 134 249 -13 219 297 37 106 chr10 64342102 64342348 -81246940 - L2 LINE L2 -65 3248 3020 437 300 37 16 chr10 64343256 64343446 -81245842 - Charlie8 DNA MER1_type -2136 281 88 271 282 136 0 chr10 64343498 64343608 -81245680 + MIR3 SINE MIR 75 199 -9 249 254 0 0 chr10 64343771 64343826 -81245462 - L2 LINE L2 -7 3265 3211 884 291 110 31 chr10 64344118 64344565 -81244723 - L2 LINE L2 -3 3310 2829 189 0 0 0 chr10 64344670 64344691 -81244597 + (T)n Simple_repeat Simple_repeat 1 21 0 2026 161 3 0 chr10 64345946 64346250 -81243038 + AluJo SINE Alu 6 310 -2 1775 103 95 0 chr10 64347590 64347842 -81241446 + AluSx SINE Alu 1 276 -36 4513 81 16 0 chr10 64347992 64348620 -81240668 - L1PA13 LINE L1 -4 6159 5522 402 252 76 17 chr10 64349384 64349503 -81239785 - L2 LINE L2 -1 3312 3187 250 282 35 103 chr10 64349594 64349768 -81239520 + L3 LINE CR1 1392 1553 -24 1883 294 111 26 chr10 64349975 64350784 -81238504 + L2 LINE L2 1443 2320 -994 1193 285 37 35 chr10 64350831 64351263 -81238025 + LTR16C LTR ERVL 51 483 -8 604 234 214 10 chr10 64351265 64351466 -81237822 + L2 LINE L2 2313 2554 -760 276 277 117 80 chr10 64351461 64351649 -81237639 + L2 LINE L2 3109 3303 -10 * 27 29 0 0 chr10 64351787 64351821 -81237467 + AT_rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr10 64352177 64352198 -81237090 + AT_rich Low_complexity Low_complexity 1 21 0 780 289 21 13 chr10 64352510 64352749 -81236539 + MIR SINE MIR 10 250 -12 521 86 0 12 chr10 64352842 64352923 -81236365 + (TTTTC)n Simple_repeat Simple_repeat 2 81 0 1230 164 26 13 chr10 64352940 64353171 -81236117 - AluJb SINE Alu -78 234 1 2023 141 0 16 chr10 64353664 64353968 -81235320 - AluSx SINE Alu -13 299 1 205 260 164 0 chr10 64354424 64354497 -81234791 + MIR SINE MIR 166 250 -12 525 224 286 0 chr10 64354602 64354749 -81234539 - MER5A DNA MER1_type 0 189 1 270 73 0 0 chr10 64355210 64355251 -81234037 + (A)n Simple_repeat Simple_repeat 1 41 0 396 333 14 14 chr10 64355302 64355443 -81233845 + MIR SINE MIR 1 141 -121 1724 195 0 23 chr10 64356687 64356995 -81232293 + AluJo SINE Alu 1 301 -11 1214 155 56 4 chr10 64357045 64357296 -81231992 - MER58B DNA MER1_type 0 341 78 927 185 76 5 chr10 64357298 64357482 -81231806 + AluJo SINE Alu 1 197 -115 246 289 133 0 chr10 64357529 64357619 -81231669 + MIR SINE MIR 50 151 -57 4138 98 21 7 chr10 64357620 64357868 -81231420 + L1PB2 LINE L1 5523 5766 -385 237 33 0 0 chr10 64357868 64357898 -81231390 + (TA)n Simple_repeat Simple_repeat 2 31 0 4138 98 21 7 chr10 64357898 64358269 -81231019 + L1PB2 LINE L1 5766 6151 0 442 292 123 47 chr10 64358683 64358919 -81230369 + L3b LINE CR1 1182 1435 -148 266 257 0 0 chr10 64359539 64359609 -81229679 - Charlie8 DNA MER1_type -2282 135 66 852 159 0 0 chr10 64359669 64359795 -81229493 - AluSg/x SINE Alu -15 295 170 2265 238 48 17 chr10 64359909 64360683 -81228605 - L1M4 LINE L1 -1254 4892 4095 805 93 0 47 chr10 64360692 64360821 -81228467 + AluY SINE Alu 187 309 -2 890 249 50 56 chr10 64360912 64361413 -81227875 - L1M4 LINE L1 -2378 3768 3271 1048 256 90 42 chr10 64361428 64361861 -81227427 - MLT1H LTR MaLR -1 548 95 21 71 0 0 chr10 64362090 64362132 -81227156 + AT_rich Low_complexity Low_complexity 1 42 0 396 250 71 44 chr10 64362590 64362900 -81226388 + L1ME4a LINE L1 5704 6023 -98 1567 162 7 23 chr10 64362985 64363294 -81225994 - L1MB1 LINE L1 -1 6167 5864 1447 76 5 10 chr10 64363496 64363693 -81225595 + L1PA10 LINE L1 5973 6168 0 219 103 0 0 chr10 64364521 64364560 -81224728 + (A)n Simple_repeat Simple_repeat 1 39 0 459 319 41 12 chr10 64364611 64364780 -81224508 + MIR SINE MIR 1 174 -88 254 271 131 47 chr10 64366220 64366327 -81222961 - L2 LINE L2 -19 3294 3179 1618 169 9 31 chr10 64368183 64368502 -81220786 + AluSx SINE Alu 1 312 0 1699 154 10 39 chr10 64369149 64369460 -81219828 - AluJb SINE Alu -8 304 3 363 229 37 9 chr10 64371243 64371352 -81217936 + L1ME4a LINE L1 5959 6070 -51 2040 147 0 0 chr10 64372879 64373179 -81216109 - AluSx SINE Alu -12 300 1 1908 316 117 38 chr10 64373222 64374271 -81215017 + L2 LINE L2 596 1819 -1495 336 24 0 0 chr10 64374271 64374312 -81214976 + (CA)n Simple_repeat Simple_repeat 1 41 0 1908 316 117 38 chr10 64374312 64374881 -81214407 + L2 LINE L2 1819 2342 -972 975 326 43 30 chr10 64374875 64375341 -81213947 + L2 LINE L2 2831 3302 -11 * 843 162 34 14 chr10 64375824 64375972 -81213316 + FRAM SINE Alu 1 151 -25 1682 171 43 0 chr10 64376595 64376875 -81212413 + AluJo SINE Alu 1 292 -20 226 273 0 0 chr10 64378412 64378478 -81210810 - L1ME LINE L1 -422 5699 5634 181 290 81 0 chr10 64378907 64378969 -81210319 - L2 LINE L2 0 3272 3206 199 305 124 29 chr10 64379010 64379115 -81210173 - L2 LINE L2 -171 3101 2987 28 29 0 0 chr10 64379239 64379274 -81210014 + GC_rich Low_complexity Low_complexity 1 35 0 216 0 0 0 chr10 64380139 64380163 -81209125 + (T)n Simple_repeat Simple_repeat 1 24 0 2272 109 0 0 chr10 64380180 64380482 -81208806 + AluSx SINE Alu 1 302 -10 2252 59 11 0 chr10 64380580 64380867 -81208421 + L1PA7 LINE L1 5861 6150 -4 186 299 159 0 chr10 64381185 64381292 -81207996 + L2 LINE L2 3189 3312 -1 557 279 40 58 chr10 64381821 64382047 -81207241 - MIR SINE MIR -40 222 1 2000 125 20 14 chr10 64382221 64382517 -81206771 + AluSx SINE Alu 1 298 -14 183 184 0 0 chr10 64382803 64382841 -81206447 + GA-rich Low_complexity Low_complexity 1 38 0 198 0 0 0 chr10 64384399 64384421 -81204867 + (CA)n Simple_repeat Simple_repeat 2 23 0 667 237 14 24 chr10 64385062 64385273 -81204015 + L1ME2 LINE L1 5956 6164 0 28 29 0 0 chr10 64386605 64386640 -81202648 + AT_rich Low_complexity Low_complexity 1 35 0 986 107 13 0 chr10 64387391 64387550 -81201738 + L1P4 LINE L1 5351 5511 -655 607 319 51 11 chr10 64388572 64388908 -81200380 + L3 LINE CR1 1171 1575 -2 341 211 26 0 chr10 64389961 64390037 -81199251 - MER81 DNA DNA -36 78 1 216 0 0 0 chr10 64390811 64390835 -81198453 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 407 292 43 64 chr10 64390900 64391169 -81198119 + L1ME4a LINE L1 5692 5927 -194 415 308 142 28 chr10 64392110 64392321 -81196967 - MIR SINE MIR -6 256 22 301 314 103 26 chr10 64393880 64394036 -81195252 + MIR SINE MIR 6 173 -89 6019 129 34 21 chr10 64394577 64396164 -81193124 + L1MA5A LINE L1 4695 6295 -2 22 35 0 0 chr10 64396236 64396265 -81193023 + AT_rich Low_complexity Low_complexity 1 29 0 531 335 71 13 chr10 64396572 64396796 -81192492 + MIR SINE MIR 13 249 -13 361 330 103 5 chr10 64397893 64398078 -81191210 - MIR SINE MIR -50 212 10 261 0 0 0 chr10 64398966 64398995 -81190293 + (TA)n Simple_repeat Simple_repeat 2 30 0 25 65 0 0 chr10 64399097 64399143 -81190145 + AT_rich Low_complexity Low_complexity 1 46 0 921 253 71 9 chr10 64399454 64399679 -81189609 - MIR SINE MIR -22 240 2 279 354 12 0 chr10 64399736 64399818 -81189470 - L2 LINE L2 -88 3184 3102 467 348 64 16 chr10 64400143 64400393 -81188895 + MIR SINE MIR 1 262 0 819 286 8 39 chr10 64400664 64400919 -81188369 + MIR SINE MIR 4 250 -12 547 335 76 24 chr10 64400953 64401374 -81187914 + L2 LINE L2 2424 2866 -448 288 338 0 0 chr10 64401661 64401735 -81187553 + L2 LINE L2 3240 3313 0 2293 101 0 0 chr10 64403040 64403336 -81185952 + AluSq SINE Alu 1 296 -17 336 24 0 0 chr10 64406893 64406934 -81182354 + (CA)n Simple_repeat Simple_repeat 2 42 0 2089 98 0 0 chr10 64408811 64409077 -81180211 + AluSx SINE Alu 2 267 -45 23 0 0 0 chr10 64409303 64409326 -81179962 + AT_rich Low_complexity Low_complexity 1 23 0 217 268 155 10 chr10 64410702 64410799 -81178489 + MIR3 SINE MIR 97 207 -1 505 172 43 17 chr10 64410879 64410995 -81178293 + MER3 DNA MER1_type 46 164 -45 * 1289 185 86 6 chr10 64410993 64411355 -81177933 + MER3 DNA MER1_type 2233 2623 0 779 78 17 0 chr10 64411478 64411593 -81177695 + (TTTC)n Simple_repeat Simple_repeat 2 118 0 251 302 129 0 chr10 64411677 64411793 -81177495 - L2 LINE L2 -40 3232 3102 381 247 54 65 chr10 64411992 64412178 -81177110 - L2 LINE L2 -48 3265 3082 253 321 48 12 chr10 64412709 64412793 -81176495 + MIR SINE MIR 62 148 -60 1251 203 70 6 chr10 64413933 64414249 -81175039 - MER58B DNA MER1_type 0 341 6 181 272 0 29 chr10 64414344 64414447 -81174841 + (TATATG)n Simple_repeat Simple_repeat 2 101 0 211 162 0 0 chr10 64414572 64414609 -81174679 - L2 LINE L2 0 3313 3277 405 0 0 0 chr10 64415937 64415982 -81173306 + (TG)n Simple_repeat Simple_repeat 1 45 0 987 211 43 0 chr10 64416315 64416524 -81172764 - MER58A DNA MER1_type -5 219 2 1877 156 32 41 chr10 64416528 64416868 -81172420 - MER1B DNA MER1_type 0 337 1 248 381 0 0 chr10 64416944 64417049 -81172239 + MIR SINE MIR 158 262 0 324 230 120 84 chr10 64417729 64417779 -81171509 - MIR SINE MIR 0 262 215 216 67 0 0 chr10 64417779 64417809 -81171479 + (TTCA)n Simple_repeat Simple_repeat 4 33 0 324 230 120 84 chr10 64417809 64417949 -81171339 - MIR SINE MIR -47 215 65 1935 151 88 44 chr10 64418411 64418821 -81170467 + MSTA LTR MaLR 1 428 0 395 308 179 13 chr10 64419779 64420091 -81169197 + L2 LINE L2 2065 2428 -886 935 119 0 53 chr10 64420348 64420499 -81168789 + FLAM_C SINE Alu 1 143 0 316 258 39 45 chr10 64420520 64420675 -81168613 + L2 LINE L2 3159 3312 -1 829 221 94 65 chr10 64420782 64420873 -81168415 + MLT1J2 LTR MaLR 95 182 -268 1770 166 3 26 chr10 64420873 64421175 -81168113 - AluJo SINE Alu -17 295 1 829 221 94 65 chr10 64421175 64421423 -81167865 + MLT1J2 LTR MaLR 182 444 -6 593 316 28 18 chr10 64421850 64422063 -81167225 + MIR SINE MIR 5 220 -42 1898 187 111 23 chr10 64422349 64422819 -81166469 + MLT2B1 LTR ERVL 8 518 -2 238 333 54 0 chr10 64422887 64422980 -81166308 + L2 LINE L2 3201 3298 -15 276 346 102 0 chr10 64423036 64423163 -81166125 + L2 LINE L2 3160 3299 -14 1891 164 0 10 chr10 64423920 64424219 -81165069 + AluJb SINE Alu 5 300 -12 245 306 8 75 chr10 64426356 64426490 -81162798 + MIR SINE MIR 94 218 -44 498 227 47 16 chr10 64427187 64427315 -81161973 + MER94 DNA DNA 3 134 0 543 266 58 13 chr10 64427502 64427656 -81161632 + MIR SINE MIR 47 207 -55 3152 102 9 78 chr10 64427656 64428194 -81161094 - MER1A DNA MER1_type 0 529 29 1626 91 4 4 chr10 64428262 64428493 -81160795 + L1PA7 LINE L1 5920 6150 -4 318 222 11 111 chr10 64429270 64429360 -81159928 + MIR SINE MIR 39 119 -89 216 167 0 0 chr10 64429820 64429856 -81159432 + CT-rich Low_complexity Low_complexity 1 36 0 271 250 36 24 chr10 64430100 64430184 -81159104 - MIR3 SINE MIR -12 196 112 357 226 48 12 chr10 64431166 64431250 -81158038 - MIR SINE MIR -111 151 65 196 379 28 36 chr10 64431783 64432031 -81157257 + L2 LINE L2 2616 2861 -453 191 316 42 0 chr10 64432359 64432454 -81156834 - MIR SINE MIR -92 170 72 182 326 196 0 chr10 64432534 64432626 -81156662 + L2 LINE L2 3152 3261 -11 352 281 107 8 chr10 64432853 64432974 -81156314 + MER94 DNA DNA 2 134 0 395 285 35 35 chr10 64434010 64434182 -81155106 + MER20 DNA MER1_type 31 202 -17 2315 179 71 11 chr10 64435805 64436369 -81152919 - L1MB4 LINE L1 0 6180 5583 193 296 176 0 chr10 64436754 64436862 -81152426 + L2 LINE L2 3179 3305 -8 410 335 68 17 chr10 64437787 64437963 -81151325 - MIR3 SINE MIR -5 203 19 889 156 54 38 chr10 64438428 64438614 -81150674 - MER53 DNA DNA 0 189 1 24 32 0 0 chr10 64438621 64438652 -81150636 + AT_rich Low_complexity Low_complexity 1 31 0 237 234 65 105 chr10 64438803 64438927 -81150361 - L2 LINE L2 -254 3059 2941 229 420 89 0 chr10 64438973 64439209 -81150079 - L2 LINE L2 -569 2745 2489 293 226 43 98 chr10 64440276 64440293 -81148995 - L1MA10 LINE L1 0 6334 6318 822 190 69 137 chr10 64440293 64440401 -81148887 - L1ME2 LINE L1 -9 6155 6041 814 186 93 31 chr10 64440401 64440594 -81148694 + MER3 DNA MER1_type 1 205 -4 822 190 69 137 chr10 64440594 64440770 -81148518 - L1ME2 LINE L1 -123 6041 5899 371 192 41 0 chr10 64440770 64440843 -81148445 - L1MB8 LINE L1 -16 6162 6087 822 190 69 137 chr10 64440843 64440921 -81148367 - L1ME2 LINE L1 -265 5899 5817 1826 182 22 54 chr10 64440946 64441314 -81147974 - MLT1A1 LTR MaLR -6 359 4 987 167 157 70 chr10 64441667 64441954 -81147334 + MER33 DNA MER1_type 1 312 -12 224 284 128 10 chr10 64443219 64443321 -81145967 - MIR3 SINE MIR -5 203 90 187 316 44 66 chr10 64445235 64445371 -81143917 - L3 LINE CR1 -857 720 588 1325 188 0 5 chr10 64445710 64445968 -81143320 - AluJb SINE Alu 0 320 64 282 181 57 0 chr10 64446673 64446778 -81142510 + (TA)n Simple_repeat Simple_repeat 1 111 0 1764 155 14 14 chr10 64447563 64447853 -81141435 + AluJo SINE Alu 1 290 -22 668 224 81 6 chr10 64447857 64448018 -81141270 + MER63A DNA MER1_type 38 210 0 1570 204 76 49 chr10 64448428 64448878 -81140410 + MLT1C LTR MaLR 6 467 0 299 299 26 68 chr10 64448890 64449007 -81140281 - MIR SINE MIR -73 135 24 228 302 88 33 chr10 64455799 64455981 -81133307 - L3 LINE CR1 -170 1407 1216 392 295 10 90 chr10 64457327 64457527 -81131761 + MIR3 SINE MIR 20 203 -5 518 115 0 13 chr10 64458024 64458102 -81131186 + MADE1 DNA Mariner 1 77 -3 647 256 12 12 chr10 64458403 64458563 -81130725 + MER5B DNA MER1_type 1 160 -18 199 290 58 77 chr10 64458628 64458835 -81130453 + L2 LINE L2 1255 1457 -1857 649 226 55 7 chr10 64459385 64459531 -81129757 + L1MC4a LINE L1 6604 6756 -1052 1441 125 94 0 chr10 64459806 64460030 -81129258 + L1PA7 LINE L1 5907 6151 -3 2148 191 134 54 chr10 64460038 64460986 -81128302 - MER4-int LTR ERV1 -5501 1097 29 3717 195 28 10 chr10 64460987 64461002 -81128286 - L1P LINE L1 -3745 2401 2388 2477 87 0 0 chr10 64461002 64461312 -81127976 - AluY SINE Alu -1 310 1 3717 195 28 10 chr10 64461312 64462075 -81127213 - L1P LINE L1 -3758 2388 1609 3412 113 8 4 chr10 64463107 64463620 -81125668 - L1P LINE L1 -1077 5069 4555 3712 98 15 2 chr10 64463646 64464367 -81124921 + L1P3 LINE L1 5051 5781 -373 1849 88 0 8 chr10 64464566 64464826 -81124462 - AluY SINE Alu 0 311 54 2192 112 3 0 chr10 64465362 64465657 -81123631 - AluY SINE Alu -15 296 1 859 230 23 9 chr10 64465667 64465884 -81123404 - L1MC3 LINE L1 0 7785 7566 563 266 59 25 chr10 64466009 64466212 -81123076 + MIR SINE MIR 53 262 0 408 92 231 0 chr10 64467619 64467684 -81121604 - MADE1 DNA Mariner 0 80 1 13183 114 21 17 chr10 64467877 64469916 -81119372 - L1P LINE L1 -3467 2679 633 27 0 0 0 chr10 64470626 64470653 -81118635 + AT_rich Low_complexity Low_complexity 1 27 0 315 0 0 0 chr10 64470653 64470692 -81118596 - HY3 scRNA scRNA -1 100 62 1270 238 75 64 chr10 64471872 64472469 -81116819 + L1ME1 LINE L1 5560 6163 -3 2048 142 3 0 chr10 64472776 64473072 -81116216 - AluSq SINE Alu -16 297 1 2202 190 80 18 chr10 64473222 64473732 -81115556 + L1 LINE L1 4687 5228 -918 267 93 0 0 chr10 64475125 64475168 -81114120 + (TG)n Simple_repeat Simple_repeat 2 44 0 201 350 109 0 chr10 64475425 64475562 -81113726 + L3b LINE CR1 1302 1453 -130 445 320 69 6 chr10 64475633 64475808 -81113480 - MIR SINE MIR -73 189 4 29 47 0 0 chr10 64476793 64476836 -81112452 + AT_rich Low_complexity Low_complexity 1 43 0 474 230 0 9 chr10 64476861 64476974 -81112314 - L1 LINE L1 -1904 4944 4833 313 302 114 100 chr10 64477523 64478271 -81111017 - L1 LINE L1 -5422 1427 660 186 43 0 0 chr10 64478271 64478294 -81110994 + (TGGGGG)n Simple_repeat Simple_repeat 3 25 0 313 302 114 100 chr10 64478294 64478564 -81110724 - L1 LINE L1 -6189 660 395 579 275 106 50 chr10 64479943 64480191 -81109097 + MIR SINE MIR 4 261 -1 594 266 0 27 chr10 64480293 64480477 -81108811 + MER104 DNA MER2_type 1 179 -1 2729 114 13 8 chr10 64480799 64481192 -81108096 - L1PA12 LINE L1 0 6168 5774 248 274 103 8 chr10 64482077 64482194 -81107094 - L1ME LINE L1 -305 5816 5689 2230 85 7 4 chr10 64482386 64482702 -81106586 - AluSx SINE Alu 0 317 1 996 283 105 12 chr10 64482702 64483211 -81106077 - L1ME LINE L1 -743 5403 5018 3549 140 19 64 chr10 64483211 64483852 -81105436 - LTR9 LTR ERV1 0 612 1 996 283 105 12 chr10 64483852 64483978 -81105310 - L1ME LINE L1 -1128 5018 4905 1813 189 0 0 chr10 64483987 64484137 -81105151 - AluJb SINE Alu -26 286 134 2406 106 0 0 chr10 64484137 64484449 -81104839 - AluSx SINE Alu 0 312 1 1813 189 0 0 chr10 64484449 64484584 -81104704 - AluJb SINE Alu -177 135 1 234 344 55 16 chr10 64485553 64485681 -81103607 + MIR3 SINE MIR 12 144 -64 245 302 147 26 chr10 64488519 64488751 -81100537 - MIR SINE MIR 0 262 3 379 136 0 57 chr10 64489370 64489458 -81099830 - L1PA15 LINE L1 -262 5903 5821 384 200 0 0 chr10 64490070 64490135 -81099153 - MER58A DNA MER1_type 0 224 160 868 201 25 0 chr10 64490139 64490298 -81098990 - AluJ SINE Alu -18 294 132 521 198 11 0 chr10 64490318 64490409 -81098879 - MER58A DNA MER1_type -15 92 1 2531 276 130 22 chr10 64491010 64491382 -81097906 + L2 LINE L2 1777 2107 -1206 2131 136 0 0 chr10 64491382 64491683 -81097605 - AluSx SINE Alu -11 301 1 2531 276 130 22 chr10 64491683 64492436 -81096852 + L2 LINE L2 2107 3036 -277 351 251 35 111 chr10 64493110 64493240 -81096048 - MER5A DNA MER1_type -5 184 73 1990 149 39 58 chr10 64493240 64493622 -81095666 + THE1C LTR MaLR 1 375 0 351 251 35 111 chr10 64493622 64493690 -81095598 - MER5A DNA MER1_type -116 73 1 464 309 26 7 chr10 64494031 64494183 -81095105 - MIR3 SINE MIR -1 207 53 804 159 0 36 chr10 64494365 64494503 -81094785 - AluJ SINE Alu -169 133 1 348 164 0 0 chr10 64495600 64495667 -81093621 + (TA)n Simple_repeat Simple_repeat 1 67 0 207 273 204 0 chr10 64495993 64496081 -81093207 + MIR SINE MIR 30 135 -127 200 271 209 23 chr10 64496191 64496320 -81092968 - L3 LINE CR1 -64 1513 1361 * 240 232 18 0 chr10 64496305 64496361 -81092927 - L2 LINE L2 0 3313 3257 364 328 178 9 chr10 64496392 64496730 -81092558 - L3 LINE CR1 -228 1349 955 4269 168 30 43 chr10 64497039 64497759 -81091529 + L1MB7 LINE L1 5116 5825 -359 2338 47 40 7 chr10 64497759 64498060 -81091228 - AluY SINE Alu 0 311 1 4269 168 30 43 chr10 64498060 64498359 -81090929 + L1MB7 LINE L1 5825 6126 -58 408 135 68 0 chr10 64500244 64500318 -81088970 - AluS SINE Alu 0 309 231 551 273 91 28 chr10 64500631 64500884 -81088404 + LTR37B LTR ERV1 198 466 -2 301 271 150 23 chr10 64501393 64501526 -81087762 + L1M2 LINE L1 815 964 -5885 309 298 24 0 chr10 64502189 64502357 -81086931 + (CA)n Simple_repeat Simple_repeat 2 173 0 262 326 11 0 chr10 64502430 64502605 -81086683 + (CA)n Simple_repeat Simple_repeat 1 177 0 2109 158 62 42 chr10 64502989 64503059 -81086229 + L1MB2 LINE L1 5706 5773 -398 1762 141 7 4 chr10 64503059 64503335 -81085953 + AluJo SINE Alu 6 282 -30 2109 158 62 42 chr10 64503335 64503719 -81085569 + L1MB2 LINE L1 5773 6169 -2 2537 81 0 0 chr10 64503729 64504036 -81085252 + AluSx SINE Alu 2 308 -4 540 256 80 92 chr10 64504048 64504516 -81084772 + L2 LINE L2 2710 3182 -131 2410 93 0 0 chr10 64504516 64504816 -81084472 + AluSx SINE Alu 1 300 -12 540 256 80 92 chr10 64504816 64504840 -81084448 + L2 LINE L2 3182 3205 -108 294 29 0 0 chr10 64504840 64504875 -81084413 + (TG)n Simple_repeat Simple_repeat 2 36 0 540 256 80 92 chr10 64504875 64504938 -81084350 + L2 LINE L2 3205 3263 -50 467 205 0 0 chr10 64505393 64505476 -81083812 - MER5B DNA MER1_type -4 174 92 878 227 99 6 chr10 64506269 64506441 -81082847 - MER5A DNA MER1_type -1 188 1 233 202 101 67 chr10 64507286 64507375 -81081913 + MARNA DNA Mariner 15 106 -480 1975 222 121 34 chr10 64507610 64508439 -81080849 + LTR1B LTR ERV1 1 826 0 439 257 9 0 chr10 64508695 64508808 -81080480 - LTR43 LTR ERV1 -306 296 183 30 0 0 0 chr10 64509080 64509110 -81080178 + AT_rich Low_complexity Low_complexity 1 30 0 1885 117 8 8 chr10 64509399 64509664 -81079624 - AluSq SINE Alu -3 310 46 24 32 0 0 chr10 64510312 64510343 -81078945 + AT_rich Low_complexity Low_complexity 1 31 0 2799 20 0 0 chr10 64510925 64511230 -81078058 + L1PA2 LINE L1 5850 6154 -1 323 313 103 15 chr10 64511288 64511483 -81077805 + MIR SINE MIR 20 231 -31 622 189 9 9 chr10 64513375 64513481 -81075807 + U6 snRNA snRNA 1 106 -1 237 345 64 0 chr10 64514172 64514323 -81074965 - MIR SINE MIR -47 215 57 1831 160 3 3 chr10 64514849 64515142 -81074146 + AluSg1 SINE Alu 2 294 -15 227 190 50 30 chr10 64517090 64517190 -81072098 + (CGTG)n Simple_repeat Simple_repeat 2 103 0 1398 221 55 52 chr10 64519271 64519800 -81069488 + MER67C LTR ERV1 22 514 0 33 43 0 0 chr10 64520076 64520123 -81069165 + AT_rich Low_complexity Low_complexity 1 47 0 261 318 47 0 chr10 64520247 64520354 -81068934 - MIR SINE MIR -71 191 80 408 257 0 19 chr10 64520502 64520607 -81068681 + L1M3e LINE L1 466 568 -6921 527 342 39 19 chr10 64520672 64520929 -81068359 + L1M3e LINE L1 1414 1675 -4890 2430 278 42 18 chr10 64521166 64522196 -81067092 + L1M3e LINE L1 2007 3060 -4505 1900 115 34 37 chr10 64522304 64522472 -81066816 - AluSx SINE Alu -17 295 127 2399 92 13 0 chr10 64522472 64522778 -81066510 - AluSp SINE Alu -3 310 1 1900 115 34 37 chr10 64522778 64522905 -81066383 - AluSx SINE Alu -185 127 1 1251 258 12 31 chr10 64522908 64523330 -81065958 - L1M4 LINE L1 -3481 2665 2252 193 244 110 63 chr10 64523837 64523964 -81065324 - MIR SINE MIR -10 252 120 258 169 138 50 chr10 64524417 64524502 -81064786 + MLT1H LTR MaLR 471 549 0 611 271 47 12 chr10 64524922 64525092 -81064196 + MER58A DNA MER1_type 7 182 -42 198 143 0 0 chr10 64525138 64525173 -81064115 + (T)n Simple_repeat Simple_repeat 1 35 0 21 36 0 0 chr10 64525582 64525610 -81063678 + AT_rich Low_complexity Low_complexity 1 28 0 3208 180 34 22 chr10 64526168 64526814 -81062474 - L1MB7 LINE L1 -9 6175 5522 317 243 84 0 chr10 64526823 64526930 -81062358 + MIR SINE MIR 136 251 -11 231 304 51 0 chr10 64527002 64527081 -81062207 - L3 LINE CR1 -266 1311 1229 202 247 209 70 chr10 64527196 64527354 -81061934 + MIR3 SINE MIR 6 185 -23 285 98 0 0 chr10 64527463 64527504 -81061784 + (A)n Simple_repeat Simple_repeat 1 41 0 202 343 14 0 chr10 64528138 64528208 -81061080 + L2 LINE L2 3238 3308 -5 463 212 95 91 chr10 64528458 64528722 -81060566 + L1ME4a LINE L1 5830 6094 -27 1850 158 7 10 chr10 64529245 64529542 -81059746 + AluJo SINE Alu 1 296 -16 22 0 0 0 chr10 64529542 64529564 -81059724 + AT_rich Low_complexity Low_complexity 1 22 0 302 291 40 13 chr10 64530195 64530346 -81058942 + HAL1b LINE L1 1191 1345 -3 23 0 0 0 chr10 64530467 64530490 -81058798 + AT_rich Low_complexity Low_complexity 1 23 0 268 260 26 0 chr10 64531592 64531669 -81057619 - MER31-int LTR ERV1 -4473 463 385 238 378 0 11 chr10 64532121 64532211 -81057077 + MIR SINE MIR 57 145 -117 420 67 0 0 chr10 64532896 64532956 -81056332 + (CA)n Simple_repeat Simple_repeat 2 61 0 216 285 29 79 chr10 64534155 64534333 -81054955 + MIR SINE MIR 12 230 -32 2041 146 58 3 chr10 64534585 64534913 -81054375 + MER7A DNA MER2_type 3 346 0 204 283 0 0 chr10 64535150 64535196 -81054092 + L2 LINE L2 3001 3046 -226 275 317 116 6 chr10 64535486 64535650 -81053638 - L2 LINE L2 -814 2500 2319 202 296 254 0 chr10 64535952 64536023 -81053265 - L2 LINE L2 0 3272 3184 2342 77 3 3 chr10 64536873 64537159 -81052129 - AluSq SINE Alu -27 286 1 327 323 103 7 chr10 64537613 64537768 -81051520 - MIR3 SINE MIR -9 199 30 1911 165 3 0 chr10 64537891 64538182 -81051106 - AluJb SINE Alu -20 292 1 330 313 81 35 chr10 64538427 64538625 -81050663 - MIR SINE MIR -45 217 11 326 139 120 28 chr10 64539750 64539858 -81049430 + L1MC5 LINE L1 7604 7721 -240 296 208 56 0 chr10 64539874 64539946 -81049342 + L1MC5 LINE L1 7812 7887 -74 308 323 98 0 chr10 64540457 64540621 -81048667 + MIR3 SINE MIR 15 194 -14 1974 133 3 7 chr10 64541692 64541977 -81047311 + AluSx SINE Alu 1 284 -28 22 56 0 0 chr10 64542323 64542359 -81046929 + AT_rich Low_complexity Low_complexity 1 36 0 239 205 5 261 chr10 64542899 64543114 -81046174 - MER5A DNA MER1_type 0 189 30 1967 104 11 0 chr10 64543116 64543384 -81045904 - AluSp SINE Alu -19 294 24 1691 167 21 34 chr10 64543789 64544172 -81045116 - L1MB8 LINE L1 0 6178 5801 265 262 76 7 chr10 64544822 64544967 -81044321 - L1ME4a LINE L1 -12 6109 5955 24 0 0 0 chr10 64545069 64545093 -81044195 + AT_rich Low_complexity Low_complexity 1 24 0 592 210 132 0 chr10 64545616 64545783 -81043505 + MER5A DNA MER1_type 1 189 0 990 238 128 24 chr10 64545783 64546166 -81043122 + L2 LINE L2 1328 1750 -1564 1844 233 25 16 chr10 64546166 64546655 -81042633 - L1ME2 LINE L1 0 6164 5672 883 269 45 5 chr10 64547115 64547338 -81041950 + MIR SINE MIR 1 232 -30 1425 201 90 12 chr10 64547340 64547663 -81041625 + MER7A DNA MER2_type 1 346 0 2430 93 0 0 chr10 64547821 64548132 -81041156 + AluY SINE Alu 1 311 0 2460 83 0 13 chr10 64548190 64548504 -81040784 + AluY SINE Alu 1 310 -1 275 250 197 8 chr10 64549355 64549487 -81039801 + MLT1L LTR MaLR 157 313 -302 * 347 341 12 24 chr10 64549465 64549632 -81039656 + MLT1L LTR MaLR 441 605 -10 197 261 87 29 chr10 64549928 64549997 -81039291 + L2 LINE L2 3238 3310 -3 467 219 21 0 chr10 64550689 64550785 -81038503 + MER5A DNA MER1_type 9 106 -83 22 0 0 0 chr10 64551147 64551169 -81038119 + AT_rich Low_complexity Low_complexity 1 22 0 1647 158 63 14 chr10 64552415 64552699 -81036589 + AluJb SINE Alu 1 298 -14 220 269 58 0 chr10 64553143 64553195 -81036093 + MER5A DNA MER1_type 135 189 0 1569 183 11 7 chr10 64553783 64554062 -81035226 - AluJb SINE Alu -8 304 25 391 303 32 27 chr10 64556004 64556192 -81033096 + MER5A DNA MER1_type 1 189 0 2100 141 0 3 chr10 64556818 64557130 -81032158 + AluSx SINE Alu 1 311 -1 1199 137 5 68 chr10 64557162 64557381 -81031907 + AluJo SINE Alu 76 280 -32 858 208 0 0 chr10 64557929 64558083 -81031205 + FAM SINE Alu 1 154 -31 655 173 14 16 chr10 64558088 64558362 -81030926 + GA-rich Low_complexity Low_complexity 1 273 0 22 56 0 0 chr10 64558427 64558463 -81030825 + AT_rich Low_complexity Low_complexity 1 36 0 740 230 109 22 chr10 64558741 64558971 -81030317 - MIR SINE MIR -11 251 2 470 296 84 35 chr10 64559996 64560486 -81028802 + L1MC5 LINE L1 7270 7783 -178 24 67 0 0 chr10 64560687 64560732 -81028556 + AT_rich Low_complexity Low_complexity 1 45 0 35 0 0 0 chr10 64561483 64561518 -81027770 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr10 64562305 64562326 -81026962 + AT_rich Low_complexity Low_complexity 1 21 0 759 131 0 15 chr10 64562437 64562567 -81026721 + L1MA6 LINE L1 6163 6290 -10 422 340 57 21 chr10 64564683 64564877 -81024411 - MIR SINE MIR -4 258 58 274 364 38 15 chr10 64565784 64565916 -81023372 - MIR SINE MIR -9 253 119 1776 151 10 20 chr10 64565935 64566249 -81023039 + AluSx SINE Alu 6 316 0 230 388 157 0 chr10 64568509 64568630 -81020658 + L2 LINE L2 3133 3272 0 2256 122 49 120 chr10 64569233 64569700 -81019588 + Tigger2 DNA MER2_type 1 2718 0 385 274 103 54 chr10 64571245 64571449 -81017839 - L2 LINE L2 -4 3309 3096 669 197 110 0 chr10 64572040 64572167 -81017121 + FAM SINE Alu 11 151 -34 258 269 8 108 chr10 64572363 64572462 -81016826 + MIR SINE MIR 28 113 -149 1985 132 20 0 chr10 64572462 64572758 -81016530 - AluSx SINE Alu -10 302 1 258 269 8 108 chr10 64572758 64572788 -81016500 + MIR SINE MIR 113 144 -118 264 171 0 0 chr10 64572819 64572860 -81016428 + 5S rRNA rRNA 2 42 -79 268 277 116 18 chr10 64572986 64573098 -81016190 + MIR SINE MIR 90 212 -50 225 65 0 0 chr10 64573144 64573175 -81016113 + (GA)n Simple_repeat Simple_repeat 2 32 0 357 267 93 35 chr10 64573300 64573472 -81015816 + MIR SINE MIR 70 251 -11 324 288 42 25 chr10 64573829 64573947 -81015341 - MER5A DNA MER1_type -4 185 66 215 316 82 38 chr10 64574677 64574835 -81014453 - L2 LINE L2 -4 3309 3145 464 238 57 0 chr10 64575054 64575159 -81014129 - L2 LINE L2 -10 3303 3193 2401 98 48 21 chr10 64575463 64575839 -81013449 + L1PA16 LINE L1 5778 6163 -3 736 238 101 16 chr10 64578134 64578382 -81010906 - LTR37A LTR ERV1 -1 425 157 221 95 0 24 chr10 64578617 64578659 -81010629 + (TTTTA)n Simple_repeat Simple_repeat 1 41 0 4415 31 0 2 chr10 64578659 64579178 -81010110 - L1PA4 LINE L1 -24 6131 5614 227 224 0 17 chr10 64579614 64579672 -81009616 - MER5B DNA MER1_type -120 58 2 2324 115 19 25 chr10 64579735 64580101 -81009187 + THE1B LTR MaLR 1 364 0 246 174 0 0 chr10 64582364 64582410 -81006878 + (CATA)n Simple_repeat Simple_repeat 2 47 0 295 297 242 8 chr10 64582541 64582669 -81006619 - MER5B DNA MER1_type 0 178 21 241 231 0 19 chr10 64583020 64583072 -81006216 - L2 LINE L2 -4 3268 3218 2208 129 3 0 chr10 64583519 64583830 -81005458 - AluSp SINE Alu 0 313 2 326 197 127 0 chr10 64583899 64583970 -81005318 - MER116 DNA Mariner 0 80 1 942 201 9 57 chr10 64584020 64584249 -81005039 - MER20 DNA MER1_type -1 218 1 301 182 88 157 chr10 64585749 64585908 -81003380 - MIR SINE MIR 0 262 115 310 282 0 0 chr10 64585953 64586031 -81003257 + MER96 DNA MER1_type? 98 175 0 22 0 0 0 chr10 64586371 64586393 -81002895 + AT_rich Low_complexity Low_complexity 1 22 0 369 286 48 18 chr10 64586556 64586724 -81002564 + L1MC4a LINE L1 5726 5898 -1910 24 77 0 0 chr10 64586948 64587000 -81002288 + AT_rich Low_complexity Low_complexity 1 52 0 607 231 45 6 chr10 64587185 64587341 -81001947 + MER5A DNA MER1_type 26 187 -2 273 300 143 35 chr10 64587350 64587521 -81001767 + MER5B DNA MER1_type 1 177 -1 245 260 13 13 chr10 64587959 64588036 -81001252 - MER5A DNA MER1_type -28 161 85 205 281 49 12 chr10 64588653 64588735 -81000553 - MIR3 SINE MIR -15 193 109 29 0 0 0 chr10 64589293 64589322 -80999966 + AT_rich Low_complexity Low_complexity 1 29 0 570 244 16 83 chr10 64591044 64591286 -80998002 + MER106A DNA MER1_type 1 226 -10 581 278 131 15 chr10 64595180 64595439 -80993849 - L2 LINE L2 -5 3308 3020 286 311 118 30 chr10 64596280 64596550 -80992738 + L1MC4a LINE L1 5625 5918 -1890 26 0 0 0 chr10 64597595 64597621 -80991667 + AT_rich Low_complexity Low_complexity 1 26 0 846 273 70 32 chr10 64598480 64598825 -80990463 + L1MC/D LINE L1 5412 5769 -2039 21 82 0 0 chr10 64599077 64599126 -80990162 + AT_rich Low_complexity Low_complexity 1 49 0 202 345 0 0 chr10 64599348 64599406 -80989882 + L2 LINE L2 3163 3220 -93 187 302 0 0 chr10 64600776 64600829 -80988459 + MIR3 SINE MIR 150 202 -6 1979 155 0 0 chr10 64601436 64601726 -80987562 - AluJo SINE Alu -17 295 6 625 261 41 5 chr10 64602268 64602460 -80986828 - MIR SINE MIR -62 146 1 2136 120 0 7 chr10 64602485 64602784 -80986504 - AluSg SINE Alu -11 299 3 1480 85 127 21 chr10 64602787 64603023 -80986265 - AluSg SINE Alu -2 308 48 291 121 0 0 chr10 64603051 64603109 -80986179 + (GA)n Simple_repeat Simple_repeat 1 58 0 1909 128 16 53 chr10 64603602 64603800 -80985488 - AluSx SINE Alu -2 310 127 198 0 0 0 chr10 64603800 64603822 -80985466 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 1909 128 16 53 chr10 64603822 64603942 -80985346 - AluSx SINE Alu -185 127 4 257 279 0 51 chr10 64604189 64604268 -80985020 - MIR SINE MIR -70 192 118 327 49 0 0 chr10 64604533 64604574 -80984714 + (CA)n Simple_repeat Simple_repeat 1 41 0 23 86 0 0 chr10 64605584 64605642 -80983646 + AT_rich Low_complexity Low_complexity 1 58 0 1042 252 69 32 chr10 64606975 64607607 -80981681 - HsTC2 DNA Tc2 0 1900 2 2278 126 19 19 chr10 64608131 64608495 -80980793 + THE1B LTR MaLR 1 364 0 308 342 111 26 chr10 64608621 64608811 -80980477 + MIR SINE MIR 51 256 -6 26 0 0 0 chr10 64608842 64608868 -80980420 + AT_rich Low_complexity Low_complexity 1 26 0 398 285 64 23 chr10 64609280 64609452 -80979836 + Charlie8 DNA MER1_type 6 184 -2233 240 91 23 0 chr10 64610089 64610133 -80979155 - MADE1 DNA Mariner -35 45 1 1800 179 0 10 chr10 64610585 64610897 -80978391 + AluJo SINE Alu 1 309 -3 21 36 0 0 chr10 64610901 64610929 -80978359 + AT_rich Low_complexity Low_complexity 1 28 0 237 204 0 0 chr10 64612135 64612184 -80977104 + L1MB5 LINE L1 5570 5618 -566 2098 129 12 19 chr10 64612184 64612509 -80976779 + MER1B DNA MER1_type 17 339 0 2524 181 41 10 chr10 64612509 64613098 -80976190 + L1MB5 LINE L1 5612 6182 -1 2321 92 25 0 chr10 64614528 64614853 -80974435 - L1PB1 LINE L1 -8 6143 5811 356 341 98 5 chr10 64614855 64615060 -80974228 - MIR SINE MIR -19 243 20 1410 104 0 0 chr10 64615242 64615424 -80973864 + AluSg/x SINE Alu 87 268 -44 249 98 0 0 chr10 64615436 64615477 -80973811 + (TAGA)n Simple_repeat Simple_repeat 4 44 0 231 288 0 55 chr10 64617371 64617444 -80971844 + L2 LINE L2 3222 3290 -23 1364 102 0 5 chr10 64617827 64618013 -80971275 - AluSg/x SINE Alu -30 282 98 1224 178 60 69 chr10 64618790 64619122 -80970166 - MER46C DNA MER2_type 0 338 10 22 0 0 0 chr10 64619172 64619194 -80970094 + AT_rich Low_complexity Low_complexity 1 22 0 1825 158 80 0 chr10 64620553 64620864 -80968424 - MER1B DNA MER1_type -1 336 1 13944 129 43 21 chr10 64621301 64621984 -80967304 + Tigger1 DNA MER2_type 22 689 -1729 1559 193 3 29 chr10 64621984 64622295 -80966993 + AluJo SINE Alu 1 303 -9 13944 129 43 21 chr10 64622295 64623957 -80965331 + Tigger1 DNA MER2_type 689 2418 0 1253 197 101 61 chr10 64624102 64624477 -80964811 + MLT1B LTR MaLR 1 390 0 213 39 0 0 chr10 64628283 64628309 -80960979 + (GA)n Simple_repeat Simple_repeat 1 26 0 213 39 0 0 chr10 64628757 64628783 -80960505 + (CCAA)n Simple_repeat Simple_repeat 3 28 0 2216 121 33 36 chr10 64632752 64633117 -80956171 + THE1B LTR MaLR 1 364 0 2474 82 0 0 chr10 64634440 64634746 -80954542 + AluSc SINE Alu 1 306 -3 207 0 0 0 chr10 64634762 64634785 -80954503 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 298 271 116 26 chr10 64635363 64635518 -80953770 - L1MC/D LINE L1 -2262 5546 5378 724 164 41 58 chr10 64636709 64636814 -80952474 - L1M LINE L1 -884 5428 5326 2217 94 0 47 chr10 64636814 64637133 -80952155 - AluSg SINE Alu -6 304 1 724 164 41 58 chr10 64637133 64637198 -80952090 - L1M LINE L1 -986 5326 5261 3654 45 0 5 chr10 64637225 64637671 -80951617 + L1PA7 LINE L1 5703 6146 -8 47 0 0 0 chr10 64638036 64638083 -80951205 + AT_rich Low_complexity Low_complexity 1 47 0 675 179 14 0 chr10 64638083 64638223 -80951065 - L1 LINE L1 -864 5282 5141 * 3952 155 31 4 chr10 64638217 64638900 -80950388 + L1MA6 LINE L1 5443 6143 -157 441 107 0 0 chr10 64638900 64638975 -80950313 - Alu SINE Alu 0 310 236 238 94 0 0 chr10 64638979 64639011 -80950277 - Alu SINE Alu -33 269 238 1928 98 23 11 chr10 64639015 64639279 -80950009 - AluSg SINE Alu -43 267 1 673 160 56 7 chr10 64639281 64639425 -80949863 + L1MA6 LINE L1 6137 6287 -13 1671 191 7 0 chr10 64639734 64640012 -80949276 + AluJo SINE Alu 3 282 -30 190 233 0 23 chr10 64640216 64640259 -80949029 - L2 LINE L2 -4 3309 3268 305 303 28 56 chr10 64640319 64640461 -80948827 + MIR3 SINE MIR 68 205 -3 2043 157 0 0 chr10 64641137 64641450 -80947838 + AluSq SINE Alu 1 313 0 1934 157 38 24 chr10 64642347 64642717 -80946571 - THE1C LTR MaLR 0 375 1 1383 191 85 78 chr10 64642816 64643378 -80945910 + L1MC5 LINE L1 6693 7255 -733 466 208 30 143 chr10 64643419 64643556 -80945732 + L1MC5 LINE L1 7208 7311 -650 2119 117 0 0 chr10 64643556 64643878 -80945410 - AluSg SINE Alu 0 322 1 466 208 30 143 chr10 64643878 64643970 -80945318 + L1MC5 LINE L1 7311 7412 -549 319 226 109 94 chr10 64644070 64644145 -80945143 + L1MC5 LINE L1 7402 7474 -487 1674 159 46 17 chr10 64644145 64644447 -80944841 + AluJb SINE Alu 1 311 -1 319 226 109 94 chr10 64644447 64644637 -80944651 + L1MC5 LINE L1 7474 7671 -290 275 238 56 32 chr10 64644712 64644838 -80944450 + L1MC5 LINE L1 7797 7925 -36 1223 189 39 4 chr10 64645679 64645939 -80943349 + MER33 DNA MER1_type 1 269 -55 1113 213 65 18 chr10 64646191 64646468 -80942820 + MER2 DNA MER2_type 56 345 0 460 149 32 85 chr10 64646787 64646951 -80942337 - AluJb SINE Alu 0 354 196 5370 78 7 0 chr10 64646996 64647726 -80941562 + L1MA1 LINE L1 5559 6293 -9 26 64 0 0 chr10 64647728 64647775 -80941513 + AT_rich Low_complexity Low_complexity 1 47 0 2245 92 7 16 chr10 64647984 64648288 -80941000 + AluSx SINE Alu 1 301 -11 2738 224 27 55 chr10 64650665 64651360 -80937928 - LTR8 LTR ERV1 0 691 16 1753 175 0 7 chr10 64654451 64654737 -80934551 - AluJb SINE Alu -28 284 1 715 319 102 27 chr10 64655014 64655425 -80933863 + L2 LINE L2 2464 2905 -409 244 321 113 13 chr10 64655459 64655618 -80933670 - MIR SINE MIR -14 248 74 507 296 133 74 chr10 64655785 64656191 -80933097 + L2 LINE L2 2883 3312 -1 282 95 0 0 chr10 64656677 64656719 -80932569 + (CA)n Simple_repeat Simple_repeat 2 43 0 2366 223 51 30 chr10 64656727 64657395 -80931893 + L1MC3 LINE L1 7104 7785 0 468 241 9 17 chr10 64657573 64657689 -80931599 - MIR SINE MIR 0 262 148 710 216 207 37 chr10 64658095 64658423 -80930865 + Charlie4a DNA MER1_type 1 384 -124 198 455 0 0 chr10 64659203 64659302 -80929986 - L3 LINE CR1 -1288 289 191 201 345 27 27 chr10 64659814 64659924 -80929364 - L3b LINE CR1 -45 1538 1429 808 152 0 8 chr10 64660815 64660940 -80928348 + AluJb SINE Alu 1 124 -188 180 97 0 0 chr10 64660942 64660973 -80928315 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 249 289 62 62 chr10 64661243 64661371 -80927917 + MIR SINE MIR 82 209 -53 25 51 0 0 chr10 64661809 64661848 -80927440 + AT_rich Low_complexity Low_complexity 1 39 0 430 341 47 18 chr10 64662737 64662907 -80926381 - MIR SINE MIR -86 176 2 231 323 197 8 chr10 64663613 64663740 -80925548 + MIR SINE MIR 106 256 -6 601 296 73 9 chr10 64664613 64664846 -80924442 - MIR SINE MIR -13 249 2 335 267 20 6 chr10 64665549 64665725 -80923563 + L1 LINE L1 5244 5421 -700 1981 101 34 4 chr10 64665757 64666024 -80923264 + AluSq SINE Alu 21 295 -18 2001 86 0 0 chr10 64667996 64668253 -80921035 - AluY SINE Alu -9 302 46 2119 125 7 0 chr10 64669301 64669588 -80919700 + AluSx SINE Alu 3 291 -21 350 213 0 0 chr10 64669692 64669767 -80919521 + MER116 DNA Mariner 5 79 -1 406 224 144 8 chr10 64669834 64669959 -80919329 - MIR SINE MIR -11 251 110 426 272 144 51 chr10 64671835 64672361 -80916927 - L1ME4a LINE L1 -53 6068 5494 389 325 34 41 chr10 64672491 64672759 -80916529 - L1ME4a LINE L1 -814 5332 5067 324 297 44 0 chr10 64673023 64673114 -80916174 + MIR SINE MIR 154 248 -14 410 320 31 44 chr10 64673327 64673555 -80915733 - L1M4 LINE L1 -1958 4188 3964 446 279 19 57 chr10 64673569 64673727 -80915561 - MIR SINE MIR -110 152 1 334 344 20 2 chr10 64675168 64675311 -80913977 - MIR SINE MIR -64 144 11 1087 208 0 10 chr10 64675868 64676075 -80913213 - MIR SINE MIR -30 232 28 695 242 137 9 chr10 64676366 64676577 -80912711 - MIR SINE MIR -15 247 10 234 0 0 0 chr10 64676670 64676696 -80912592 + (CAATG)n Simple_repeat Simple_repeat 5 30 0 253 248 119 18 chr10 64677523 64677632 -80911656 + MIR SINE MIR 116 235 -27 2059 135 7 0 chr10 64677760 64678049 -80911239 - AluSg SINE Alu -19 291 1 376 245 38 47 chr10 64678085 64678191 -80911097 + L2 LINE L2 3168 3272 0 603 251 27 44 chr10 64679231 64679414 -80909874 + MER77 LTR ERV1 41 220 -385 1660 123 20 0 chr10 64679477 64679729 -80909559 + L1PA15 LINE L1 5907 6163 -2 1332 228 37 21 chr10 64679829 64680145 -80909143 + MER77 LTR ERV1 302 597 -8 21 0 0 0 chr10 64680228 64680249 -80909039 + AT_rich Low_complexity Low_complexity 1 21 0 280 252 63 31 chr10 64680577 64680704 -80908584 + MLT1H1 LTR MaLR 180 310 -239 354 199 36 11 chr10 64680791 64680878 -80908410 + MLT1H1 LTR MaLR 464 592 -3 485 212 35 0 chr10 64681565 64681678 -80907610 - Charlie4a DNA MER1_type -29 479 363 988 203 87 19 chr10 64681767 64682077 -80907211 - Charlie4a DNA MER1_type -127 381 51 28 29 0 0 chr10 64682905 64682940 -80906348 + AT_rich Low_complexity Low_complexity 1 35 0 921 308 0 0 chr10 64683277 64683504 -80905784 - MIR SINE MIR -21 241 15 180 0 0 0 chr10 64684186 64684206 -80905082 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 180 0 0 0 chr10 64684517 64684537 -80904751 + (TTG)n Simple_repeat Simple_repeat 2 21 0 21 0 0 0 chr10 64685319 64685340 -80903948 + AT_rich Low_complexity Low_complexity 1 21 0 204 111 0 0 chr10 64685450 64685486 -80903802 + (TTTTA)n Simple_repeat Simple_repeat 1 36 0 266 287 81 0 chr10 64685597 64685684 -80903604 + MIR SINE MIR 58 151 -111 366 297 100 62 chr10 64685868 64686336 -80902952 - L2 LINE L2 -13 3300 2815 681 308 26 23 chr10 64686346 64686648 -80902640 - L2 LINE L2 -646 2668 2366 1915 133 0 18 chr10 64686755 64687069 -80902219 + AluSc SINE Alu 1 309 0 322 182 80 11 chr10 64687269 64687357 -80901931 - L1ME4a LINE L1 -40 6081 5988 661 213 0 8 chr10 64687975 64688097 -80901191 + FLAM_C SINE Alu 2 122 -21 1445 208 26 13 chr10 64688113 64688421 -80900867 + AluJo SINE Alu 1 312 0 21 71 0 0 chr10 64688571 64688613 -80900675 + AT_rich Low_complexity Low_complexity 1 42 0 4995 77 27 3 chr10 64689890 64690562 -80898726 + LTR12 LTR ERV1 1 688 0 23 0 0 0 chr10 64691173 64691196 -80898092 + AT_rich Low_complexity Low_complexity 1 23 0 225 333 89 41 chr10 64691805 64691928 -80897360 - MIR3 SINE MIR -65 143 15 567 333 23 7 chr10 64692884 64693184 -80896104 + L1ME LINE L1 5477 5781 -340 3716 264 81 46 chr10 64693355 64695623 -80893665 + L1MEc LINE L1 113 2452 -3763 16077 29 5 0 chr10 64695623 64698297 -80890991 + L1PA3 LINE L1 3468 6152 -3 3716 264 81 46 chr10 64698297 64698427 -80890861 + L1MEc LINE L1 2452 2576 -3639 2861 82 70 5 chr10 64698629 64699009 -80890279 + MLT2A1 LTR ERVL 2 413 -31 462 36 0 0 chr10 64699009 64699065 -80890223 + (TCTA)n Simple_repeat Simple_repeat 3 58 0 2861 82 70 5 chr10 64699065 64699100 -80890188 + MLT2A1 LTR ERVL 413 444 0 438 305 4 52 chr10 64699378 64699611 -80889677 + MLT1K LTR MaLR 365 586 -2 2111 133 3 16 chr10 64700956 64701272 -80888016 + AluSx SINE Alu 1 312 0 325 329 115 39 chr10 64701318 64701945 -80887343 - L2 LINE L2 -17 3296 2614 587 250 0 0 chr10 64701945 64702073 -80887215 + FLAM_A SINE Alu 2 129 -4 350 309 165 24 chr10 64702170 64702419 -80886869 - L2 LINE L2 -1156 2158 1875 22 0 0 0 chr10 64703080 64703102 -80886186 + AT_rich Low_complexity Low_complexity 1 22 0 2380 68 3 3 chr10 64703368 64703661 -80885627 - AluSc SINE Alu -16 293 1 360 295 151 19 chr10 64703800 64704441 -80884847 + L1MEc LINE L1 3276 4001 -2214 1244 120 0 0 chr10 64704447 64704614 -80884674 + AluSc SINE Alu 1 167 -142 244 89 22 0 chr10 64706089 64706134 -80883154 + L1M4 LINE L1 2877 2922 -3224 529 248 9 0 chr10 64706134 64706247 -80883041 + FLAM_A SINE Alu 2 115 -18 2541 105 5 24 chr10 64706248 64706619 -80882669 + THE1B LTR MaLR 1 364 0 959 170 5 32 chr10 64706635 64706823 -80882465 + AluJo SINE Alu 118 300 -12 5136 236 106 30 chr10 64706827 64707481 -80881807 + L1M4 LINE L1 2925 3528 -2636 6678 142 26 25 chr10 64707481 64708710 -80880578 - Tigger3b DNA MER2_type -1 1230 1 5136 236 106 30 chr10 64708710 64709699 -80879589 + L1M4 LINE L1 3528 4440 -1724 1770 180 7 0 chr10 64709699 64709993 -80879295 - AluJb SINE Alu -16 296 1 5136 236 106 30 chr10 64709993 64710667 -80878621 + L1M4 LINE L1 4440 5426 -738 1385 172 48 22 chr10 64711162 64711430 -80877858 - AluJo SINE Alu -13 299 25 325 143 0 0 chr10 64711455 64711504 -80877784 - Alu SINE Alu -252 51 3 27 29 0 0 chr10 64711601 64711635 -80877653 + AT_rich Low_complexity Low_complexity 1 34 0 811 291 45 8 chr10 64711759 64712006 -80877282 - MIR SINE MIR -5 257 2 241 213 33 0 chr10 64712425 64712486 -80876802 + (CATATA)n Simple_repeat Simple_repeat 3 65 0 1494 198 0 42 chr10 64712496 64712779 -80876509 - AluJo SINE Alu -41 271 1 828 215 70 0 chr10 64713200 64713372 -80875916 - MER58A DNA MER1_type -15 209 26 711 262 105 45 chr10 64713424 64713806 -80875482 - MLT1I LTR MaLR -2 407 3 183 42 0 0 chr10 64714207 64714231 -80875057 + (CA)n Simple_repeat Simple_repeat 2 25 0 211 254 68 0 chr10 64715220 64715279 -80874009 - MIR SINE MIR -193 69 7 22 80 0 0 chr10 64715360 64715410 -80873878 + AT_rich Low_complexity Low_complexity 1 50 0 478 272 44 0 chr10 64716006 64716120 -80873168 + L2 LINE L2 3195 3313 0 205 264 19 94 chr10 64716891 64716997 -80872291 + MIR SINE MIR 119 216 -46 22 70 0 0 chr10 64718501 64718544 -80870744 + AT_rich Low_complexity Low_complexity 1 43 0 232 388 0 0 chr10 64718703 64718783 -80870505 + L2 LINE L2 3189 3268 -4 3700 139 30 48 chr10 64719161 64719893 -80869395 + L1MB2 LINE L1 5446 6164 -7 641 148 102 51 chr10 64720241 64720417 -80868871 - MER53 DNA DNA 0 189 5 533 15 15 0 chr10 64720459 64720525 -80868763 + (TTATA)n Simple_repeat Simple_repeat 4 70 0 557 218 14 139 chr10 64721160 64721376 -80867912 - MER5A DNA MER1_type 0 189 1 2257 95 0 3 chr10 64722008 64722302 -80866986 + AluSg SINE Alu 1 293 -17 1614 298 88 29 chr10 64722759 64723114 -80866174 + L2 LINE L2 1822 2155 -1159 1820 173 3 7 chr10 64723114 64723420 -80865868 - AluJo SINE Alu -7 305 1 1614 298 88 29 chr10 64723420 64723949 -80865339 + L2 LINE L2 2155 2758 -556 493 283 91 87 chr10 64723950 64724445 -80864843 + MLT1J LTR MaLR 1 497 -14 502 303 80 59 chr10 64724456 64724954 -80864334 + L2 LINE L2 2755 3264 -49 1367 224 52 89 chr10 64724957 64725404 -80863884 + MLT1F LTR MaLR 108 537 -5 359 183 0 0 chr10 64725427 64725487 -80863801 + MER21B LTR ERV1 21 80 -783 2434 240 97 32 chr10 64725516 64726288 -80863000 + MER21B LTR ERV1 19 840 -23 2426 86 0 3 chr10 64726647 64726948 -80862340 - AluSq SINE Alu -13 300 1 521 224 71 51 chr10 64727468 64727530 -80861758 - L1ME2 LINE L1 -11 6153 6094 2650 134 36 2 chr10 64727530 64727941 -80861347 - MSTB LTR MaLR -1 425 1 521 224 71 51 chr10 64727941 64728074 -80861214 - L1ME2 LINE L1 -70 6094 5954 1570 135 33 0 chr10 64730054 64730328 -80858960 + L1MA4 LINE L1 6007 6289 -11 312 91 0 0 chr10 64731083 64731127 -80858161 + (GAAAA)n Simple_repeat Simple_repeat 2 45 0 21 0 0 0 chr10 64731830 64731851 -80857437 + AT_rich Low_complexity Low_complexity 1 21 0 3817 138 17 71 chr10 64732543 64733151 -80856137 + MER50 LTR ERV1 1 563 -171 2044 148 3 0 chr10 64733151 64733461 -80855827 + AluSx SINE Alu 1 311 -1 3817 138 17 71 chr10 64733461 64733598 -80855690 + MER50 LTR ERV1 563 706 -28 346 289 275 15 chr10 64733757 64734030 -80855258 + L2 LINE L2 2029 2372 -942 928 266 39 4 chr10 64734039 64734272 -80855016 + MIR SINE MIR 1 241 -21 519 342 145 30 chr10 64734334 64735040 -80854248 + L2 LINE L2 2432 3228 -44 335 233 103 62 chr10 64735149 64735167 -80854121 - MIR SINE MIR -91 171 155 1671 186 21 3 chr10 64735167 64735458 -80853830 + AluJo SINE Alu 1 296 -16 335 233 103 62 chr10 64735458 64735585 -80853703 - MIR SINE MIR -107 155 20 308 300 33 0 chr10 64735612 64735702 -80853586 + MIR SINE MIR 37 129 -133 1184 148 82 0 chr10 64735715 64735959 -80853329 + MER21A LTR ERV1 1 264 -667 2682 178 45 17 chr10 64735965 64736499 -80852789 + MER21A LTR ERV1 377 925 -6 185 246 72 43 chr10 64737040 64737109 -80852179 - MIR3 SINE MIR -124 84 14 302 273 0 0 chr10 64737144 64737232 -80852056 + GA-rich Low_complexity Low_complexity 3 90 0 234 211 160 26 chr10 64739292 64739486 -80849802 + L1MC/D LINE L1 4556 4775 -1371 * 364 274 19 40 chr10 64739483 64739735 -80849553 + L1MC/D LINE L1 5294 5544 -2241 401 254 70 0 chr10 64739834 64739948 -80849340 - MIR SINE MIR -4 258 137 1662 165 60 3 chr10 64740187 64740502 -80848786 + MER7A DNA MER2_type 16 346 0 4387 155 36 34 chr10 64740551 64740832 -80848456 + L1MB1 LINE L1 5203 5482 -686 183 80 0 0 chr10 64740832 64740857 -80848431 + (CA)n Simple_repeat Simple_repeat 2 26 0 4387 155 36 34 chr10 64740857 64741380 -80847908 + L1MB1 LINE L1 5482 6019 -149 1876 128 50 3 chr10 64741380 64741662 -80847626 - AluSq SINE Alu -18 295 1 4387 155 36 34 chr10 64741662 64741813 -80847475 + L1MB1 LINE L1 6019 6168 0 431 275 35 35 chr10 64741882 64741963 -80847325 - MIR SINE MIR -119 143 60 2421 93 0 0 chr10 64741963 64742274 -80847014 + AluY SINE Alu 1 311 0 431 275 35 35 chr10 64742274 64742334 -80846954 - MIR SINE MIR -201 61 2 1714 190 3 0 chr10 64742414 64742704 -80846584 + AluJb SINE Alu 1 291 -21 2085 132 0 10 chr10 64742766 64743069 -80846219 + AluSx SINE Alu 1 300 -12 1679 125 46 16 chr10 64743413 64743716 -80845572 + L1P LINE L1 11 322 -5824 716 122 65 0 chr10 64744487 64744610 -80844678 + L1PA16 LINE L1 6034 6164 -2 302 306 0 0 chr10 64744727 64744812 -80844476 + MIR SINE MIR 168 252 -10 738 259 78 31 chr10 64745664 64745958 -80843330 + Charlie2 DNA MER1_type 5 312 -2470 742 226 42 35 chr10 64745984 64746245 -80843043 + Charlie2 DNA MER1_type 1853 2115 -747 42234 32 23 2 chr10 64746257 64752238 -80837050 + L1PA3 LINE L1 73 6155 0 1997 139 3 0 chr10 64752251 64752575 -80836713 + L1PB1 LINE L1 5819 6143 -8 1736 225 78 24 chr10 64752598 64753269 -80836019 + Charlie2 DNA MER1_type 2127 2833 -29 313 273 139 19 chr10 64753862 64754145 -80835143 + L1MC5 LINE L1 4735 5051 -1095 1031 258 102 67 chr10 64754416 64754954 -80834334 + L1MC5 LINE L1 5363 5919 -1889 627 79 0 0 chr10 64754975 64755064 -80834224 + MER83C LTR ERV1 221 309 -64 1818 171 0 23 chr10 64755273 64755578 -80833710 + AluJo SINE Alu 1 298 -14 1814 197 69 113 chr10 64755910 64756798 -80832490 + L1MC5 LINE L1 7061 7909 -52 645 232 25 87 chr10 64757125 64757396 -80831892 + MLT1H1 LTR MaLR 1 253 -289 319 314 155 35 chr10 64758627 64758853 -80830435 - MIR SINE MIR 0 262 10 1715 153 48 10 chr10 64759110 64759405 -80829883 - AluJb SINE Alu 0 312 7 3204 81 29 19 chr10 64759460 64759941 -80829347 + LTR19A LTR ERV1 1 486 0 40 37 0 0 chr10 64760900 64760954 -80828334 + AT_rich Low_complexity Low_complexity 1 54 0 1933 155 20 15 chr10 64761088 64761429 -80827859 - MER61A LTR ERV1 0 343 1 2609 204 92 45 chr10 64761769 64762364 -80826924 + L1ME LINE L1 325 963 -5082 215 31 31 0 chr10 64762364 64762396 -80826892 + (CAA)n Simple_repeat Simple_repeat 1 33 0 2609 204 92 45 chr10 64762396 64762535 -80826753 + L1ME LINE L1 963 1094 -4951 320 75 75 0 chr10 64762535 64762588 -80826700 - MLT2B1 LTR ERVL 0 520 464 1192 153 30 75 chr10 64762641 64762882 -80826406 - Tigger2 DNA MER2_type -1 2717 2488 1727 154 0 11 chr10 64762882 64763154 -80826134 + AluJb SINE Alu 44 312 0 1192 153 30 75 chr10 64763154 64763180 -80826108 - Tigger2 DNA MER2_type -230 2488 2462 4553 147 20 1 chr10 64763235 64763977 -80825311 - Tigger2 DNA MER2_type -1961 757 2 2162 199 72 16 chr10 64763984 64764417 -80824871 - MLT2B1 LTR ERVL -63 457 1 2839 188 41 50 chr10 64764418 64764524 -80824764 + L1ME LINE L1 1092 1197 -5367 1016 67 0 0 chr10 64764524 64764659 -80824629 + L1MA2 LINE L1 6170 6304 0 2839 188 41 50 chr10 64764659 64764674 -80824614 + L1ME LINE L1 1197 1211 -5353 243 0 0 0 chr10 64764674 64764701 -80824587 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2839 188 41 50 chr10 64764701 64765360 -80823928 + L1ME LINE L1 1211 1955 -4609 745 160 0 34 chr10 64765366 64765485 -80823803 + FLAM_A SINE Alu 6 120 -22 6424 241 33 12 chr10 64765611 64766905 -80822383 + L1ME LINE L1 2262 3599 -2965 1975 113 88 0 chr10 64766905 64767188 -80822100 + AluSx SINE Alu 1 308 -4 6424 241 33 12 chr10 64767188 64768039 -80821249 + L1ME LINE L1 3599 4430 -2134 336 172 62 16 chr10 64768039 64768103 -80821185 + FLAM_A SINE Alu 32 98 -35 1956 159 14 14 chr10 64768103 64768473 -80820815 + L1MC2 LINE L1 5972 6341 -3 279 0 0 0 chr10 64768512 64768543 -80820745 + (TG)n Simple_repeat Simple_repeat 2 32 0 250 349 60 0 chr10 64768555 64768638 -80820650 + L2 LINE L2 3156 3243 -29 1748 160 0 7 chr10 64769850 64770119 -80819169 - AluJb SINE Alu -45 267 1 325 224 82 87 chr10 64770420 64770639 -80818649 + L1ME LINE L1 5850 6067 -472 322 223 170 27 chr10 64770861 64770973 -80818315 - MIR SINE MIR -21 241 114 980 215 20 119 chr10 64771127 64771523 -80817765 - MER57A LTR ERV1 -5 398 42 627 290 68 42 chr10 64772505 64773032 -80816256 - L1MC/D LINE L1 -2011 5797 5257 563 212 89 0 chr10 64773547 64773693 -80815595 - MIR SINE MIR -29 233 75 291 109 0 0 chr10 64773774 64773820 -80815468 - MADE1 DNA Mariner 0 80 35 1801 169 0 23 chr10 64773912 64774214 -80815074 - AluJb SINE Alu -15 297 3 231 293 37 12 chr10 64774783 64774865 -80814423 - L2 LINE L2 -529 2785 2702 901 168 11 38 chr10 64775593 64775778 -80813510 + FRAM SINE Alu 1 173 -3 2654 144 27 7 chr10 64775904 64776314 -80812974 + MSTB LTR MaLR 2 419 -7 191 210 97 32 chr10 64776443 64776505 -80812783 - MIR SINE MIR -73 189 124 628 200 148 38 chr10 64777139 64777232 -80812056 + MLT1D LTR MaLR 216 297 -208 2764 26 0 0 chr10 64777232 64777540 -80811748 + AluY SINE Alu 1 308 -3 628 200 148 38 chr10 64777540 64777643 -80811645 + MLT1D LTR MaLR 297 458 -47 282 333 48 24 chr10 64778650 64778860 -80810428 - L1ME LINE L1 -461 5701 5487 339 356 144 10 chr10 64779736 64779944 -80809344 - MIR SINE MIR -7 255 20 787 157 42 6 chr10 64779966 64780132 -80809156 + L1MB7 LINE L1 6013 6184 0 707 227 90 37 chr10 64780365 64780788 -80808500 + L1ME2 LINE L1 5587 6050 -114 333 108 27 27 chr10 64780807 64780881 -80808407 + L1MA10 LINE L1 6251 6324 -10 254 280 136 34 chr10 64781019 64781137 -80808151 - L3b LINE CR1 -203 1380 1251 324 184 46 81 chr10 64781301 64781388 -80807900 - MER63 DNA MER1_type -260 802 719 932 173 14 72 chr10 64781520 64781728 -80807560 + AluJb SINE Alu 98 293 -19 193 286 12 83 chr10 64782974 64783058 -80806230 - MIR SINE MIR -80 182 105 486 342 27 5 chr10 64783106 64783293 -80805995 + MIR3 SINE MIR 9 199 -9 426 179 0 0 chr10 64783718 64783785 -80805503 - AluJ/FLAM SINE Alu -242 70 4 184 29 29 29 chr10 64786015 64786049 -80803239 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 376 262 74 90 chr10 64786303 64786559 -80802729 + L1M2 LINE L1 695 946 -5903 29 28 0 0 chr10 64786846 64786882 -80802406 + GC_rich Low_complexity Low_complexity 1 36 0 24 0 0 0 chr10 64787089 64787113 -80802175 + AT_rich Low_complexity Low_complexity 1 24 0 1027 209 142 53 chr10 64787544 64788017 -80801271 - MER113 DNA MER1_type? -3 518 4 443 265 157 18 chr10 64788141 64788307 -80800981 - MIR SINE MIR -6 256 68 361 356 30 42 chr10 64789029 64789360 -80799928 + L2 LINE L2 1683 2009 -1305 196 308 143 15 chr10 64789360 64789493 -80799795 + L2 LINE L2 2131 2280 -1034 182 275 0 0 chr10 64789715 64789755 -80799533 - MIR SINE MIR -2 260 221 250 262 87 120 chr10 64789775 64790230 -80799058 + L2 LINE L2 2594 3046 -226 491 234 70 6 chr10 64790367 64790572 -80798716 + MER46C DNA MER2_type 96 337 -1 219 342 47 77 chr10 64790761 64790995 -80798293 + L2 LINE L2 3040 3266 -6 327 137 0 0 chr10 64791151 64791200 -80798088 - AluJo SINE Alu -35 267 226 940 212 0 11 chr10 64791200 64791384 -80797904 - AluJo SINE Alu -126 186 5 221 282 21 54 chr10 64791462 64791563 -80797725 - MIR SINE MIR -51 157 63 936 168 84 0 chr10 64791864 64792019 -80797269 - MER21B LTR ERV1 -368 495 328 549 283 75 0 chr10 64792146 64792333 -80796955 + MER113 DNA MER1_type? 293 493 -28 181 280 65 56 chr10 64792803 64792910 -80796378 + L2 LINE L2 2643 2750 -564 1611 155 34 44 chr10 64793902 64794198 -80795090 + AluJb SINE Alu 1 293 -19 253 239 30 0 chr10 64794980 64795047 -80794241 + MER91B DNA MER1_type 55 123 -67 287 266 0 64 chr10 64795077 64795171 -80794117 + MER91B DNA MER1_type 102 189 -1 481 309 0 8 chr10 64795185 64795311 -80793977 + L2 LINE L2 3148 3272 0 745 231 131 5 chr10 64795694 64795893 -80793395 - MER58A DNA MER1_type 0 224 1 256 316 77 0 chr10 64795961 64796078 -80793210 - MIR SINE MIR -65 197 72 942 279 89 46 chr10 64796125 64796809 -80792479 + L2 LINE L2 2593 3300 -13 452 299 15 30 chr10 64797546 64797680 -80791608 + MIR3 SINE MIR 76 207 -1 23 0 0 0 chr10 64797765 64797788 -80791500 + AT_rich Low_complexity Low_complexity 1 23 0 316 317 161 6 chr10 64798036 64798197 -80791091 + MIR3 SINE MIR 4 189 -19 1023 178 115 14 chr10 64798407 64798693 -80790595 + MER69 DNA AcHobo 1919 2233 -293 246 260 0 20 chr10 64799612 64799662 -80789626 - L2 LINE L2 -23 3249 3201 326 361 110 18 chr10 64799679 64799906 -80789382 + MIR SINE MIR 1 248 -14 180 250 0 0 chr10 64799940 64799976 -80789312 + L3 LINE CR1 238 273 -1304 1659 205 64 60 chr10 64800554 64801057 -80788231 - MLT1D LTR MaLR 0 505 1 323 305 128 49 chr10 64801184 64801348 -80787940 - MIR3 SINE MIR -14 194 18 734 207 81 0 chr10 64801749 64801923 -80787365 + MER5A DNA MER1_type 1 188 -1 26 0 0 0 chr10 64802279 64802305 -80786983 + AT_rich Low_complexity Low_complexity 1 26 0 736 157 54 20 chr10 64802621 64802768 -80786520 + MER20 DNA MER1_type 1 152 -67 5719 146 27 6 chr10 64802809 64803762 -80785526 + L1MA6 LINE L1 5148 6133 -167 2249 93 3 19 chr10 64803762 64804072 -80785216 + AluSx SINE Alu 7 311 -1 5719 146 27 6 chr10 64804072 64804244 -80785044 + L1MA6 LINE L1 6133 6300 0 700 153 9 0 chr10 64804261 64804372 -80784916 + FRAM SINE Alu 20 131 -45 286 204 0 0 chr10 64804394 64804448 -80784840 + MER20 DNA MER1_type 166 219 0 1479 219 58 0 chr10 64804534 64804877 -80784411 - MER47A DNA MER2_type 0 366 4 2277 60 14 0 chr10 64805930 64806214 -80783074 - AluY SINE Alu -23 288 1 228 329 37 106 chr10 64806877 64807199 -80782089 + L2 LINE L2 2956 3255 -17 233 323 62 0 chr10 64807432 64807528 -80781760 - L2 LINE L2 0 3272 3171 608 294 72 13 chr10 64807583 64807818 -80781470 + MIR SINE MIR 3 251 -11 437 261 61 39 chr10 64808403 64808633 -80780655 - L1MC4a LINE L1 -1756 6052 5818 457 304 165 49 chr10 64809656 64810061 -80779227 - L2 LINE L2 -785 2529 2050 1805 176 0 6 chr10 64810061 64810374 -80778914 + AluSx SINE Alu 1 311 -1 457 304 165 49 chr10 64810374 64810482 -80778806 - L2 LINE L2 -1264 2050 1956 318 106 0 0 chr10 64810497 64810544 -80778744 + (TA)n Simple_repeat Simple_repeat 2 48 0 461 198 0 0 chr10 64810819 64810910 -80778378 - L1MA4A LINE L1 -24 6279 6189 377 156 188 26 chr10 64810915 64811069 -80778219 - L1MA4A LINE L1 -182 6121 5943 259 267 109 59 chr10 64811080 64811181 -80778107 - L2 LINE L2 -15 3298 3193 486 318 54 65 chr10 64811682 64812098 -80777190 + HAL1 LINE L1 1074 1486 -1021 1785 118 34 37 chr10 64812098 64812395 -80776893 + AluSx SINE Alu 7 302 -10 486 318 54 65 chr10 64812395 64812425 -80776863 + HAL1 LINE L1 1486 1515 -992 1881 216 28 43 chr10 64812618 64812781 -80776507 - MLT1D LTR MaLR -3 502 338 1846 144 48 36 chr10 64812781 64813114 -80776174 - MER1B DNA MER1_type 0 337 1 1881 216 28 43 chr10 64813114 64813460 -80775828 - MLT1D LTR MaLR -167 338 1 23 0 0 0 chr10 64813509 64813532 -80775756 + AT_rich Low_complexity Low_complexity 1 23 0 347 251 80 28 chr10 64813557 64813735 -80775553 + L1MCa LINE L1 2317 2539 -3948 581 201 61 23 chr10 64813737 64813951 -80775337 - HsTC2b DNA Tc2 0 920 699 766 143 0 8 chr10 64813954 64814073 -80775215 + FLAM_C SINE Alu 1 118 -25 1243 248 84 11 chr10 64814099 64814478 -80774810 - HsTC2b DNA Tc2 -207 711 305 618 228 0 31 chr10 64814498 64814660 -80774628 - HsTC2b DNA Tc2 -755 160 4 340 303 37 10 chr10 64814706 64814775 -80774513 + L1MCa LINE L1 2553 2619 -3807 1092 172 74 77 chr10 64814775 64814979 -80774309 + MER33 DNA MER1_type 1 205 -2380 2038 118 7 11 chr10 64814979 64815266 -80774022 + AluSx SINE Alu 1 286 -26 1092 172 74 77 chr10 64815266 64815386 -80773902 + MER33 DNA MER1_type 205 324 0 340 303 37 10 chr10 64815386 64815610 -80773678 + L1MCa LINE L1 2619 2854 -3572 232 154 77 44 chr10 64815780 64815871 -80773417 + L1MCa LINE L1 3131 3224 -3202 2541 217 64 65 chr10 64815880 64816295 -80772993 + L1MCa LINE L1 249 663 -5944 1467 199 188 38 chr10 64816295 64816705 -80772583 + MLT2B1 LTR ERVL 1 487 -33 315 49 0 0 chr10 64816705 64816746 -80772542 + (CA)n Simple_repeat Simple_repeat 2 42 0 1467 199 188 38 chr10 64816746 64816787 -80772501 + MLT2B1 LTR ERVL 487 520 0 2541 217 64 65 chr10 64816787 64817306 -80771982 + L1MCa LINE L1 663 1182 -5425 228 289 0 10 chr10 64817412 64817516 -80771772 + L1MCa LINE L1 3393 3495 -2931 1096 139 0 33 chr10 64817525 64817705 -80771583 + AluSg/x SINE Alu 137 310 0 229 308 55 6 chr10 64817713 64817895 -80771393 + L1MCa LINE L1 3509 3699 -2727 314 217 200 0 chr10 64817920 64818040 -80771248 - MLT1F1 LTR MaLR -205 362 219 267 228 0 0 chr10 64818043 64818100 -80771188 - MLT1F1 LTR MaLR -492 75 19 23 42 0 21 chr10 64818114 64818133 -80771155 + AT_rich Low_complexity Low_complexity 1 19 -28 2025 152 0 7 chr10 64818133 64818430 -80770858 - AluJb SINE Alu -17 295 1 23 42 0 21 chr10 64818430 64818458 -80770830 + AT_rich Low_complexity Low_complexity 19 47 0 355 236 11 0 chr10 64818483 64818572 -80770716 + L1MC4a LINE L1 7326 7415 -393 370 273 62 10 chr10 64818778 64818972 -80770316 + L1MC4 LINE L1 7693 7896 -146 319 152 8 56 chr10 64818976 64819101 -80770187 + GA-rich Low_complexity Low_complexity 1 119 0 226 198 89 20 chr10 64819103 64819204 -80770084 + L1MC4 LINE L1 7918 8025 -17 2091 93 0 0 chr10 64819212 64819481 -80769807 + AluY SINE Alu 32 300 -11 27 49 0 0 chr10 64819705 64819746 -80769542 + AT_rich Low_complexity Low_complexity 1 41 0 24 67 0 0 chr10 64820143 64820188 -80769100 + AT_rich Low_complexity Low_complexity 1 45 0 547 289 87 25 chr10 64820248 64820490 -80768798 + MIR SINE MIR 6 262 0 284 233 29 68 chr10 64820664 64820767 -80768521 + MIR3 SINE MIR 110 208 0 1927 158 13 0 chr10 64820835 64821139 -80768149 - AluSx SINE Alu -4 308 1 688 113 0 16 chr10 64821435 64821559 -80767729 + (TTCC)n Simple_repeat Simple_repeat 3 124 0 229 279 43 29 chr10 64821883 64822023 -80767265 - L1ME LINE L1 -337 5784 5643 387 0 0 0 chr10 64822661 64822704 -80766584 + (CA)n Simple_repeat Simple_repeat 2 44 0 202 338 41 82 chr10 64822773 64823066 -80766222 + L2 LINE L2 2620 2900 -414 236 318 15 61 chr10 64823175 64823307 -80765981 + L2 LINE L2 2837 2962 -310 522 245 90 56 chr10 64823523 64823756 -80765532 - MIR SINE MIR -12 250 10 247 310 117 35 chr10 64823913 64824058 -80765230 + L2 LINE L2 3109 3265 -7 186 316 144 29 chr10 64824182 64824225 -80765063 + L2 LINE L2 3154 3191 -122 487 78 0 33 chr10 64824225 64824315 -80764973 + L1PB1 LINE L1 6064 6150 -1 186 316 144 29 chr10 64824315 64824410 -80764878 + L2 LINE L2 3191 3308 -5 990 250 104 4 chr10 64825019 64825278 -80764010 + MER69B DNA AcHobo 1 285 -941 1568 167 113 3 chr10 64825278 64825607 -80763681 + MLT1A1 LTR MaLR 1 365 0 1160 207 105 148 chr10 64825657 64825844 -80763444 + MER69B DNA AcHobo 344 538 -1988 1647 159 10 42 chr10 64825844 64826133 -80763155 + AluJo SINE Alu 1 280 -32 180 0 0 0 chr10 64826136 64826156 -80763132 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 1160 207 105 148 chr10 64826156 64826835 -80762453 + MER69B DNA AcHobo 540 1174 -1352 1327 178 40 130 chr10 64826835 64827234 -80762054 - MLT1A1 LTR MaLR -2 363 1 1160 207 105 148 chr10 64827234 64827285 -80762003 + MER69B DNA AcHobo 1174 1226 0 225 279 36 63 chr10 64827822 64827933 -80761355 + L2 LINE L2 2946 3053 -219 850 130 14 34 chr10 64828476 64828622 -80760666 - FLAM_C SINE Alu 0 143 1 216 97 0 0 chr10 64828670 64828701 -80760587 + (TTCA)n Simple_repeat Simple_repeat 3 33 0 2159 93 0 0 chr10 64828841 64829144 -80760144 - AluSc SINE Alu 0 303 1 1521 175 49 30 chr10 64829200 64829565 -80759723 - MLT1A2 LTR MaLR 0 374 3 818 166 7 0 chr10 64830945 64831135 -80758153 + FLAM_C SINE Alu 1 191 0 632 157 35 0 chr10 64831285 64831400 -80757888 + FLAM_A SINE Alu 1 119 -14 45 69 0 0 chr10 64831437 64831524 -80757764 + AT_rich Low_complexity Low_complexity 1 87 0 266 316 42 0 chr10 64833616 64833711 -80755577 - MIR SINE MIR -5 257 159 21 0 0 0 chr10 64833879 64833900 -80755388 + AT_rich Low_complexity Low_complexity 1 21 0 27 0 0 0 chr10 64834652 64834679 -80754609 + AT_rich Low_complexity Low_complexity 1 27 0 271 263 13 0 chr10 64835002 64835078 -80754210 + MIR SINE MIR 74 150 -112 302 293 30 20 chr10 64835409 64835508 -80753780 + L2 LINE L2 3154 3253 -19 257 294 15 0 chr10 64836119 64836187 -80753101 + L2 LINE L2 3240 3308 -5 1831 180 0 0 chr10 64837956 64838261 -80751027 + AluJb SINE Alu 1 305 -7 477 261 73 41 chr10 64840059 64840277 -80749011 - L1MC/D LINE L1 -2038 5770 5546 1253 152 159 4 chr10 64840720 64840990 -80748298 + MER47A DNA MER2_type 18 329 -37 851 123 97 0 chr10 64841944 64842098 -80747190 + LTR41 LTR ERVL 1 169 -604 282 197 33 7 chr10 64842153 64842243 -80747045 + LTR50 LTR ERVL 685 792 -3 21 0 0 0 chr10 64842693 64842714 -80746574 + AT_rich Low_complexity Low_complexity 1 21 0 4429 149 52 77 chr10 64842715 64843869 -80745419 - L1MA5 LINE L1 -4 6296 5224 1633 175 7 18 chr10 64843869 64844155 -80745133 - AluJb SINE Alu -29 283 1 4429 149 52 77 chr10 64844155 64844856 -80744432 - L1MA5 LINE L1 -1076 5224 4507 1013 177 11 27 chr10 64845049 64845235 -80744053 - AluJb SINE Alu -129 183 1 4358 151 52 14 chr10 64845236 64846191 -80743097 - L1 LINE L1 -1005 5141 4150 826 237 14 32 chr10 64847533 64847752 -80741536 - MER20 DNA MER1_type -3 216 2 455 305 108 0 chr10 64847765 64847932 -80741356 + MIR SINE MIR 47 231 -31 22 80 0 0 chr10 64848794 64848844 -80740444 + AT_rich Low_complexity Low_complexity 1 50 0 21 36 0 0 chr10 64850165 64850193 -80739095 + AT_rich Low_complexity Low_complexity 1 28 0 643 155 112 17 chr10 64851539 64851655 -80737633 + FLAM_C SINE Alu 1 127 -6 690 209 99 6 chr10 64851756 64851928 -80737360 - MER5A DNA MER1_type 0 189 2 200 336 135 0 chr10 64852102 64852206 -80737082 + MIR SINE MIR 4 121 -141 243 304 14 0 chr10 64852495 64852564 -80736724 + L2 LINE L2 3175 3244 -69 394 242 114 26 chr10 64852682 64852857 -80736431 - MIR SINE MIR -54 208 17 2191 114 7 0 chr10 64852950 64853248 -80736040 + AluSx SINE Alu 1 300 -12 902 121 0 8 chr10 64853660 64853784 -80735504 + FLAM_C SINE Alu 1 123 -20 2359 84 13 10 chr10 64854256 64854567 -80734721 - AluSq SINE Alu -1 312 1 27 62 0 0 chr10 64856843 64856891 -80732397 + AT_rich Low_complexity Low_complexity 1 48 0 293 269 60 0 chr10 64857911 64857978 -80731310 - L2 LINE L2 -1 3312 3242 952 155 50 0 chr10 64858188 64858349 -80730939 - MER45A DNA AcHobo 0 178 10 24 53 0 0 chr10 64858837 64858875 -80730413 + AT_rich Low_complexity Low_complexity 1 38 0 506 249 73 19 chr10 64859062 64859289 -80729999 - L1ME3A LINE L1 -306 5864 5681 273 191 149 113 chr10 64859310 64859478 -80729810 + LTR33A LTR ERVL 1 174 -349 333 269 60 7 chr10 64859605 64859754 -80729534 + LTR33A LTR ERVL 351 507 -16 389 275 100 15 chr10 64859781 64860156 -80729132 - L1ME3A LINE L1 -541 5580 5148 1516 157 60 8 chr10 64861598 64861898 -80727390 - AluJb SINE Alu 0 314 1 298 255 31 20 chr10 64862066 64862164 -80727124 - MIR SINE MIR -68 194 96 344 221 25 78 chr10 64863037 64863241 -80726047 + Charlie7 DNA MER1_type 2420 2612 0 1176 120 115 14 chr10 64863918 64864127 -80725161 - MER30 DNA MER1_type 0 230 1 782 244 124 49 chr10 64864746 64864817 -80724471 - MLT1J1 LTR MaLR -3 443 379 2324 104 0 0 chr10 64864817 64865126 -80724162 - AluSg SINE Alu -1 309 1 782 244 124 49 chr10 64865126 64865464 -80723824 - MLT1J1 LTR MaLR -67 379 3 195 42 0 0 chr10 64866265 64866289 -80722999 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 404 252 84 15 chr10 64866359 64866490 -80722798 + MER5B DNA MER1_type 38 177 -1 397 315 24 16 chr10 64866671 64866798 -80722490 + MIR SINE MIR 57 184 -78 2377 101 0 0 chr10 64867263 64867571 -80721717 - AluSg SINE Alu -2 308 1 1319 265 74 20 chr10 64867674 64868341 -80720947 - L1MC4a LINE L1 -743 5403 5186 47 19 0 0 chr10 64868418 64868472 -80720816 + AT_rich Low_complexity Low_complexity 1 54 0 26 0 0 0 chr10 64868612 64868638 -80720650 + AT_rich Low_complexity Low_complexity 1 26 0 890 156 14 0 chr10 64868638 64868779 -80720509 - AluSg/x SINE Alu -22 290 148 2304 112 3 6 chr10 64868968 64869281 -80720007 + AluSx SINE Alu 1 312 0 23 0 0 0 chr10 64869281 64869304 -80719984 + AT_rich Low_complexity Low_complexity 1 23 0 2090 112 14 0 chr10 64869304 64869602 -80719686 + AluSx SINE Alu 1 302 0 441 313 71 80 chr10 64869605 64869969 -80719319 - L1MC4a LINE L1 -1215 4931 4571 308 278 206 8 chr10 64870367 64870554 -80718734 + MIR SINE MIR 16 246 -16 259 248 92 0 chr10 64871149 64871258 -80718030 - L1ME4a LINE L1 -205 5916 5798 24 0 0 0 chr10 64871943 64871967 -80717321 + AT_rich Low_complexity Low_complexity 1 24 0 180 0 0 0 chr10 64872800 64872820 -80716468 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 527 213 50 44 chr10 64873334 64873494 -80715794 - MER103 DNA DNA -2 164 4 288 196 56 112 chr10 64873817 64873960 -80715328 - L1ME3A LINE L1 -66 6104 5970 607 314 86 0 chr10 64874142 64874352 -80714936 + MIR SINE MIR 29 256 -6 298 286 123 29 chr10 64874953 64875124 -80714164 - L2 LINE L2 -19 3294 3108 293 341 76 16 chr10 64875310 64875441 -80713847 + MIR3 SINE MIR 40 178 -30 920 217 96 25 chr10 64876279 64876599 -80712689 - L1MD3 LINE L1 -3 8039 7709 22 0 0 0 chr10 64876678 64876700 -80712588 + AT_rich Low_complexity Low_complexity 1 22 0 1351 171 68 0 chr10 64876714 64877006 -80712282 - L1MC4 LINE L1 -381 7661 7350 5926 186 42 17 chr10 64877052 64878459 -80710829 - Charlie1a DNA MER1_type -4 1451 10 969 201 30 4 chr10 64878684 64878952 -80710336 + MER33 DNA MER1_type 47 321 -3 1990 147 7 0 chr10 64879276 64879575 -80709713 - AluSx SINE Alu -11 301 1 399 309 0 40 chr10 64880461 64880587 -80708701 + L2 LINE L2 3169 3289 -24 2046 176 48 128 chr10 64880795 64881550 -80707738 + LTR8A LTR ERV1 34 727 0 434 274 65 89 chr10 64881617 64881865 -80707423 - MIR SINE MIR -1 261 20 1030 256 31 0 chr10 64882164 64882391 -80706897 - MIR SINE MIR -27 235 2 446 227 10 70 chr10 64882530 64882703 -80706585 - L1MC4a LINE L1 -493 5809 5685 34 42 0 0 chr10 64882714 64882762 -80706526 + AT_rich Low_complexity Low_complexity 1 48 0 589 318 18 0 chr10 64882775 64882995 -80706293 - L1MC4a LINE L1 -2104 5704 5481 2034 112 13 1 chr10 64883537 64884279 -80705009 + L1MA5 LINE L1 5362 6295 -5 769 85 0 0 chr10 64886088 64886194 -80703094 + AluSp SINE Alu 1 106 -207 465 66 0 0 chr10 64886296 64886357 -80702931 + (GGAA)n Simple_repeat Simple_repeat 4 64 0 198 0 0 0 chr10 64886358 64886380 -80702908 + (GGGGA)n Simple_repeat Simple_repeat 2 23 0 432 235 37 42 chr10 64886609 64886826 -80702462 + L1ME4a LINE L1 5698 5913 -208 1872 102 68 0 chr10 64887866 64888185 -80701103 - AluSx SINE Alu 0 338 2 2421 53 0 17 chr10 64888193 64888494 -80700794 - AluY SINE Alu -15 296 1 3099 168 24 6 chr10 64889020 64889652 -80699636 - L1P LINE L1 -815 5331 4689 282 329 59 0 chr10 64889936 64890021 -80699267 + L2 LINE L2 3166 3255 -17 26 30 0 0 chr10 64890083 64890116 -80699172 + AT_rich Low_complexity Low_complexity 1 33 0 2847 121 0 36 chr10 64890253 64890693 -80698595 + MSTC LTR MaLR 1 424 -4 309 230 90 10 chr10 64891314 64891414 -80697874 - L1ME4a LINE L1 -58 6063 5956 898 156 39 7 chr10 64891480 64891634 -80697654 - FRAM SINE Alu -6 160 2 573 232 188 51 chr10 64891755 64892031 -80697257 + L2 LINE L2 2999 3312 -1 242 305 72 36 chr10 64892042 64892209 -80697079 - MER117 DNA MER1_type -24 173 1 484 205 8 8 chr10 64893415 64893542 -80695746 + CT-rich Low_complexity Low_complexity 3 129 0 2045 157 3 0 chr10 64893549 64893861 -80695427 - AluSq SINE Alu 0 313 1 200 214 18 0 chr10 64893880 64893936 -80695352 + CT-rich Low_complexity Low_complexity 2 58 0 356 169 23 54 chr10 64893984 64894164 -80695124 + (GGGTG)n Simple_repeat Simple_repeat 1 174 0 185 59 20 59 chr10 64894227 64894278 -80695010 + (CGGGG)n Simple_repeat Simple_repeat 4 52 0 2308 230 56 30 chr10 64894425 64895160 -80694128 + Zaphod DNA AcHobo 191 944 -3087 1097 221 118 23 chr10 64895196 64895246 -80694042 + Zaphod DNA AcHobo 3605 3649 -382 22 56 0 0 chr10 64895246 64895282 -80694006 + AT_rich Low_complexity Low_complexity 1 36 0 1097 221 118 23 chr10 64895282 64895586 -80693702 + Zaphod DNA AcHobo 3649 4031 0 329 322 46 13 chr10 64895609 64895761 -80693527 - MLT1K LTR MaLR -322 266 110 2067 197 91 53 chr10 64895791 64896375 -80692913 - MER69 DNA AcHobo 0 2526 1921 1092 219 41 34 chr10 64896392 64896684 -80692604 - MER69 DNA AcHobo -814 412 119 236 191 21 0 chr10 64896749 64896796 -80692492 - MLT1K LTR MaLR -504 84 37 254 173 39 19 chr10 64897146 64897198 -80692090 - MER103 DNA DNA -58 108 56 1673 162 20 20 chr10 64897201 64897379 -80691909 - AluJb SINE Alu -15 297 117 198 0 0 0 chr10 64897379 64897401 -80691887 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 1673 162 20 20 chr10 64897401 64897519 -80691769 - AluJb SINE Alu -194 118 1 211 274 83 0 chr10 64897529 64897613 -80691675 - MIR SINE MIR -15 247 157 301 391 0 0 chr10 64897853 64898032 -80691256 + C-rich Low_complexity Low_complexity 1 179 0 275 200 21 42 chr10 64898061 64898156 -80691132 + (CCCCG)n Simple_repeat Simple_repeat 1 93 0 232 222 19 0 chr10 64898195 64898303 -80690985 + C-rich Low_complexity Low_complexity 3 112 0 1918 104 0 6 chr10 64898567 64898921 -80690367 + L1PA15 LINE L1 5609 6157 -8 180 330 55 117 chr10 64899172 64899220 -80690068 - L2 LINE L2 -213 3059 3010 2929 171 52 8 chr10 64899220 64899753 -80689535 - L1MB8 LINE L1 0 6178 5622 180 330 55 117 chr10 64899753 64899977 -80689311 - L2 LINE L2 -262 3010 2804 205 298 106 0 chr10 64901062 64901166 -80688122 - L2 LINE L2 -39 3274 3160 4736 119 22 14 chr10 64901256 64901705 -80687583 - Tigger3(Golem) DNA MER2_type -4 3024 2565 2133 85 43 0 chr10 64901705 64901986 -80687302 + AluSq SINE Alu 1 293 -20 4736 119 22 14 chr10 64901986 64902278 -80687010 - Tigger3(Golem) DNA MER2_type -463 2565 2277 591 152 38 9 chr10 64902269 64902374 -80686914 - Tigger3(Golem) DNA MER2_type -2921 108 1 * 1153 151 74 25 chr10 64902450 64902735 -80686553 - AluSx SINE Alu 0 302 4 810 259 61 0 chr10 64903408 64903605 -80685683 - MER63A DNA MER1_type 0 210 2 247 338 88 47 chr10 64903974 64904122 -80685166 + L2 LINE L2 3112 3265 -7 216 233 12 81 chr10 64904516 64904602 -80684686 - MIR SINE MIR -70 192 113 960 188 54 0 chr10 64905495 64905681 -80683607 - MER3 DNA MER1_type -5 204 9 375 268 16 16 chr10 64906611 64906738 -80682550 + MARNA DNA Mariner 211 337 -249 248 214 71 43 chr10 64906828 64906898 -80682390 - MARNA DNA Mariner -471 115 44 213 113 38 75 chr10 64907112 64907165 -80682123 - L2 LINE L2 0 3313 3263 204 333 57 0 chr10 64907523 64907628 -80681660 - L2 LINE L2 -4 3309 3199 2084 198 58 2 chr10 64908064 64908499 -80680789 - MLT1C LTR MaLR -8 459 1 820 156 0 8 chr10 64909007 64909129 -80680159 + AluJo SINE Alu 14 134 -178 267 317 39 10 chr10 64909208 64909312 -80679976 - MER5A DNA MER1_type -21 168 62 550 260 104 0 chr10 64909524 64909697 -80679591 + MIR SINE MIR 63 253 -9 293 266 0 0 chr10 64910668 64910732 -80678556 + L2 LINE L2 3207 3270 -2 454 266 138 28 chr10 64910777 64911131 -80678157 + L1ME4a LINE L1 5712 6104 -17 613 162 201 13 chr10 64911971 64912125 -80677163 - MER5A DNA MER1_type 0 189 7 393 305 201 0 chr10 64912686 64912840 -80676448 + MER5A DNA MER1_type 4 188 -1 274 203 17 0 chr10 64912914 64912973 -80676315 - MIR SINE MIR -21 241 182 2103 124 0 0 chr10 64914586 64914869 -80674419 - AluSx SINE Alu -20 292 10 395 274 140 11 chr10 64915102 64915281 -80674007 + LTR16A1 LTR ERVL 246 447 -10 281 280 28 28 chr10 64915282 64915389 -80673899 + MIR SINE MIR 156 262 0 2010 143 7 0 chr10 64915728 64916036 -80673252 - AluSx SINE Alu -2 310 1 523 130 43 43 chr10 64916374 64916489 -80672799 - L1MA9 LINE L1 0 6312 6198 181 291 136 39 chr10 64916617 64916720 -80672568 - L3b LINE CR1 -166 1417 1305 211 255 21 0 chr10 64916834 64916881 -80672407 - MER5A DNA MER1_type -71 118 71 2223 122 0 0 chr10 64916884 64917180 -80672108 - AluSx SINE Alu -16 296 1 27 0 0 0 chr10 64917828 64917855 -80671433 + AT_rich Low_complexity Low_complexity 1 27 0 285 303 113 28 chr10 64918079 64918221 -80671067 - MIR SINE MIR -12 250 97 192 77 0 0 chr10 64919102 64919128 -80670160 + (TTTC)n Simple_repeat Simple_repeat 2 27 0 479 26 52 0 chr10 64919302 64919379 -80669909 + (TCTA)n Simple_repeat Simple_repeat 2 82 0 354 319 108 24 chr10 64922736 64922949 -80666339 - MIR SINE MIR -14 248 18 877 246 62 25 chr10 64924095 64924335 -80664953 - MIR SINE MIR -12 250 2 280 290 70 20 chr10 64924443 64924543 -80664745 + L2 LINE L2 3164 3268 -4 475 294 60 17 chr10 64926092 64926327 -80662961 - MIR SINE MIR -16 246 2 1743 129 45 39 chr10 64926440 64926750 -80662538 - AluJo SINE Alu 0 312 1 192 200 0 0 chr10 64926886 64926936 -80662352 + (CA)n Simple_repeat Simple_repeat 1 50 0 1926 173 24 24 chr10 64926943 64927284 -80662004 - MER2 DNA MER2_type -1 343 3 234 0 0 0 chr10 64927284 64927310 -80661978 + (TG)n Simple_repeat Simple_repeat 1 26 0 * 597 49 0 0 chr10 64927309 64927390 -80661898 + (GA)n Simple_repeat Simple_repeat 1 81 0 2296 113 57 25 chr10 64928063 64928416 -80660872 + THE1B LTR MaLR 1 364 0 379 295 22 29 chr10 64928632 64928771 -80660517 + MIR3 SINE MIR 41 178 -30 469 287 79 0 chr10 64929996 64930160 -80659128 - MIR SINE MIR 0 262 86 458 225 115 39 chr10 64930859 64931041 -80658247 - MIR SINE MIR -46 216 21 2162 164 18 20 chr10 64931625 64932016 -80657272 + L1MA7 LINE L1 5674 6063 -228 887 182 0 0 chr10 64932020 64932168 -80657120 - FRAM SINE Alu -7 169 22 1461 116 30 13 chr10 64932199 64932431 -80656857 + L1MA6 LINE L1 6065 6300 0 349 282 78 17 chr10 64932685 64932836 -80656452 - MIR3 SINE MIR -36 172 13 557 217 0 94 chr10 64933807 64933945 -80655343 - FLAM_A SINE Alu -8 125 1 462 319 28 16 chr10 64933996 64934247 -80655041 - L1MC4 LINE L1 -169 7873 7620 888 242 51 31 chr10 64934979 64935235 -80654053 + MIR SINE MIR 2 262 0 893 217 32 14 chr10 64936488 64936769 -80652519 - L1M4 LINE L1 -1674 4472 4187 530 274 20 51 chr10 64936815 64937012 -80652276 + MIR SINE MIR 71 261 -1 393 252 117 9 chr10 64937097 64937208 -80652080 - MIR SINE MIR -56 206 84 224 378 71 8 chr10 64937332 64937570 -80651718 + L2 LINE L2 2553 2805 -509 193 311 78 39 chr10 64938003 64938106 -80651182 + L2 LINE L2 3006 3112 -160 1908 157 0 22 chr10 64938452 64938765 -80650523 - AluJb SINE Alu -6 306 1 2641 108 22 16 chr10 64938910 64939279 -80650009 + THE1C LTR MaLR 5 375 0 290 130 65 0 chr10 64941648 64941694 -80647594 - MLT1G3 LTR MaLR -127 463 415 * 305 257 29 0 chr10 64941690 64941760 -80647528 - MLT1G3 LTR MaLR -256 274 203 259 226 59 59 chr10 64941808 64941910 -80647378 - L2 LINE L2 -326 2946 2845 2291 105 0 0 chr10 64942109 64942405 -80646883 - AluSx SINE Alu -16 296 1 2353 93 0 0 chr10 64942928 64943229 -80646059 + AluY SINE Alu 1 301 -10 1486 250 15 33 chr10 64943262 64943771 -80645517 + MLT1G1 LTR MaLR 23 569 -21 2838 128 9 53 chr10 64943771 64944223 -80645065 + MSTB1 LTR MaLR 1 432 0 1486 250 15 33 chr10 64944223 64944245 -80645043 + MLT1G1 LTR MaLR 569 590 0 386 221 54 38 chr10 64944325 64944450 -80644838 + MIR SINE MIR 31 154 -54 1387 213 78 31 chr10 64945439 64945796 -80643492 - MLT1A2 LTR MaLR 0 374 1 1570 93 40 22 chr10 64945857 64946082 -80643206 - MER30 DNA MER1_type -1 229 1 196 295 90 0 chr10 64946772 64946871 -80642417 - MIR SINE MIR -48 160 52 238 232 85 12 chr10 64946918 64947000 -80642288 - MIR SINE MIR -75 133 46 238 288 110 48 chr10 64948925 64949071 -80640217 + MER5A DNA MER1_type 11 165 -24 596 261 43 49 chr10 64949375 64949559 -80639729 - MER63A DNA MER1_type 0 210 28 218 324 162 9 chr10 64950414 64950525 -80638763 + MIR SINE MIR 17 144 -118 2598 178 10 59 chr10 64950678 64951201 -80638087 + MLT1D LTR MaLR 1 497 -8 866 221 15 5 chr10 64951375 64951574 -80637714 - MIR SINE MIR -47 215 15 227 210 28 66 chr10 64951859 64952040 -80637248 + (CGGG)n Simple_repeat Simple_repeat 3 176 0 * 316 221 49 33 chr10 64951929 64952051 -80637237 + (CGGGG)n Simple_repeat Simple_repeat 1 124 0 2277 87 7 3 chr10 64952425 64952714 -80636574 - AluSg SINE Alu -20 290 1 361 43 0 0 chr10 64953643 64953689 -80635599 - MADE1 DNA Mariner -34 46 1 912 274 57 46 chr10 64954361 64954814 -80634474 - L2 LINE L2 -2 3311 2854 212 250 77 29 chr10 64954817 64954921 -80634367 - L2 LINE L2 -570 2744 2636 258 244 156 54 chr10 64954944 64955149 -80634139 - L2 LINE L2 -653 2661 2436 194 353 81 23 chr10 64955180 64955353 -80633935 + L2 LINE L2 3085 3267 -5 1499 165 71 11 chr10 64958667 64958957 -80630331 - AluJb SINE Alu 0 306 1 1019 257 20 14 chr10 64958976 64959268 -80630020 - L1ME1 LINE L1 -3 6163 5870 801 172 82 79 chr10 64959767 64959879 -80629409 - MER96B DNA MER1_type? -1 416 306 2264 114 0 3 chr10 64959879 64960186 -80629102 + AluSg SINE Alu 1 306 -4 801 172 82 79 chr10 64960186 64960340 -80628948 - MER96B DNA MER1_type? -111 306 149 269 250 0 0 chr10 64960338 64960394 -80628894 + MER96B DNA MER1_type? 362 417 0 * 240 348 142 43 chr10 64961199 64961432 -80627856 + MIR SINE MIR 6 261 -1 2533 105 13 35 chr10 64961572 64961944 -80627344 + THE1B LTR MaLR 1 364 0 201 305 17 51 chr10 64962159 64962277 -80627011 + L3b LINE CR1 1117 1230 -353 207 348 122 23 chr10 64962517 64962738 -80626550 + MIR SINE MIR 7 249 -13 23 92 0 0 chr10 64966840 64966905 -80622383 + AT_rich Low_complexity Low_complexity 1 65 0 2882 19 0 0 chr10 64967977 64968399 -80620889 + L1P LINE L1 3517 4124 -2022 217 288 25 12 chr10 64968399 64968479 -80620809 + L2 LINE L2 3162 3242 -71 654 194 61 6 chr10 64968525 64968705 -80620583 - Charlie5 DNA MER1_type -92 2520 2331 869 101 7 50 chr10 64969236 64969375 -80619913 - FLAM_C SINE Alu 0 143 11 269 237 0 0 chr10 64969401 64969460 -80619828 + MER63 DNA MER1_type 967 1025 -35 766 169 0 16 chr10 64970581 64970705 -80618583 - FLAM_A SINE Alu -10 123 2 850 184 26 131 chr10 64971797 64972064 -80617224 + MLT2D LTR ERVL 98 336 -78 2002 142 6 22 chr10 64972071 64972382 -80616906 - AluSx SINE Alu -6 306 1 28 48 0 0 chr10 64972466 64972508 -80616780 + AT_rich Low_complexity Low_complexity 1 42 0 1447 157 56 56 chr10 64973852 64974157 -80615131 + AluJb SINE Alu 1 305 -7 188 337 43 33 chr10 64974625 64974717 -80614571 + MIR3 SINE MIR 14 106 -102 2267 142 22 0 chr10 64976534 64976894 -80612394 + L1PA16 LINE L1 5790 6157 -9 23 0 0 0 chr10 64976894 64976917 -80612371 + AT_rich Low_complexity Low_complexity 1 23 0 2471 64 6 10 chr10 64976971 64977283 -80612005 + AluY SINE Alu 1 311 0 21 36 0 0 chr10 64977744 64977772 -80611516 + GC_rich Low_complexity Low_complexity 1 28 0 220 173 39 19 chr10 64981681 64981733 -80607555 - MIR SINE MIR -122 140 88 21 0 0 0 chr10 64983278 64983299 -80605989 + AT_rich Low_complexity Low_complexity 1 21 0 185 263 53 18 chr10 64983586 64983643 -80605645 + L2 LINE L2 3214 3272 0 2627 43 0 3 chr10 64984143 64984446 -80604842 - AluY SINE Alu -9 302 1 289 323 107 30 chr10 64984746 64985149 -80604139 + L2 LINE L2 1968 2401 -913 209 312 102 54 chr10 64985192 64985397 -80603891 + L2 LINE L2 2512 2726 -588 2324 97 0 10 chr10 64985595 64985895 -80603393 - AluSg SINE Alu -13 297 1 2314 93 10 10 chr10 64987088 64987401 -80601887 - AluSp SINE Alu 0 313 1 183 80 0 0 chr10 64987744 64987769 -80601519 + (A)n Simple_repeat Simple_repeat 1 25 0 681 144 0 0 chr10 64988579 64988683 -80600605 - L1PB4 LINE L1 0 6156 6053 1038 231 4 21 chr10 64988986 64989228 -80600060 - L1PB4 LINE L1 -2 6154 5917 386 268 115 27 chr10 64989274 64989457 -80599831 + MIR SINE MIR 63 261 -1 1901 179 0 10 chr10 64989492 64989804 -80599484 - AluJo SINE Alu -3 309 1 332 196 147 10 chr10 64991530 64991632 -80597656 - L1MD3 LINE L1 -10 7985 7870 183 247 27 55 chr10 64991700 64991773 -80597515 - MIR SINE MIR -79 183 113 189 0 0 0 chr10 64991875 64991896 -80597392 + (CA)n Simple_repeat Simple_repeat 2 22 0 1951 186 78 43 chr10 64992373 64992857 -80596431 - MLT1D LTR MaLR -4 501 1 1089 263 79 42 chr10 64993021 64993478 -80595810 - MLT1H LTR MaLR 0 549 76 288 380 10 5 chr10 64993503 64993695 -80595593 - L2 LINE L2 -2420 894 702 420 311 84 60 chr10 64994831 64995130 -80594158 + MARNA DNA Mariner 83 388 -198 664 285 10 1 chr10 64995589 64995780 -80593508 - MIR SINE MIR -32 230 40 722 167 83 39 chr10 64995782 64995962 -80593326 - MER20 DNA MER1_type 0 219 32 327 261 40 111 chr10 64996211 64996410 -80592878 - L3 LINE CR1 -28 1549 1365 436 102 0 0 chr10 64996614 64996673 -80592615 + U2 snRNA snRNA 1 59 -129 1866 143 3 21 chr10 64997009 64997295 -80591993 + AluSx SINE Alu 1 281 -31 22 56 0 0 chr10 64998905 64998941 -80590347 + AT_rich Low_complexity Low_complexity 1 36 0 28 29 0 0 chr10 64999326 64999361 -80589927 + AT_rich Low_complexity Low_complexity 1 35 0 247 191 32 63 chr10 65000570 65000633 -80588655 + MIR SINE MIR 123 183 -79 186 103 0 0 chr10 65001322 65001351 -80587937 + (TTC)n Simple_repeat Simple_repeat 2 30 0 931 302 177 7 chr10 65002181 65002738 -80586550 - L2 LINE L2 -40 3273 2629 590 279 75 0 chr10 65003950 65004111 -80585177 - MIR SINE MIR -75 187 15 2102 122 0 3 chr10 65004368 65004663 -80584625 - AluSq SINE Alu -19 294 1 394 286 61 51 chr10 65004985 65005054 -80584234 - MIR SINE MIR -7 255 188 882 206 47 23 chr10 65005054 65005268 -80584020 - MER20 DNA MER1_type 0 219 1 394 286 61 51 chr10 65005268 65005394 -80583894 - MIR SINE MIR -74 188 58 465 323 122 0 chr10 65010871 65011060 -80578228 - MIR SINE MIR -12 250 39 204 267 99 40 chr10 65011122 65011223 -80578065 + MIR3 SINE MIR 64 170 -38 328 260 121 121 chr10 65011252 65011656 -80577632 + L2 LINE L2 2908 3311 -2 252 218 18 0 chr10 65011840 65011895 -80577393 - MIR3 SINE MIR -47 161 106 * 266 309 243 20 chr10 65011891 65012043 -80577245 - MIR3 SINE MIR -10 198 13 605 273 11 22 chr10 65012494 65012677 -80576611 - MER5A DNA MER1_type -5 184 4 369 0 0 0 chr10 65012841 65012882 -80576406 + (TG)n Simple_repeat Simple_repeat 2 42 0 433 167 0 22 chr10 65013099 65013189 -80576099 - MER53 DNA DNA -7 182 95 544 315 69 0 chr10 65013795 65014011 -80575277 + MIR SINE MIR 23 253 -9 376 270 224 11 chr10 65014549 65014723 -80574565 + MIR SINE MIR 31 241 -21 216 0 0 0 chr10 65015003 65015027 -80574261 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 242 245 85 57 chr10 65015179 65015285 -80574003 + L2 LINE L2 3201 3309 -4 746 283 170 34 chr10 65015469 65015822 -80573466 + L2 LINE L2 2912 3312 -1 2348 81 0 3 chr10 65018216 65018514 -80570774 + AluSg1 SINE Alu 1 297 -12 198 103 0 0 chr10 65018528 65018557 -80570731 + (A)n Simple_repeat Simple_repeat 1 29 0 1225 186 93 79 chr10 65019503 65019869 -80569419 - MLT1A2 LTR MaLR 0 374 4 791 302 154 37 chr10 65019889 65020645 -80568643 - L2 LINE L2 -9 3304 2438 1608 154 97 4 chr10 65020654 65020933 -80568355 + AluSx SINE Alu 2 306 -6 257 322 112 14 chr10 65021048 65021191 -80568097 + L2 LINE L2 3116 3272 0 2157 117 7 3 chr10 65021197 65021506 -80567782 + AluSx SINE Alu 1 310 -2 749 242 6 0 chr10 65021518 65021679 -80567609 + FRAM SINE Alu 2 163 -13 35062 105 20 13 chr10 65021723 65027818 -80561470 + L1PA6 LINE L1 11 6143 -11 21 36 0 0 chr10 65028538 65028566 -80560722 + AT_rich Low_complexity Low_complexity 1 28 0 341 267 104 123 chr10 65028880 65029348 -80559940 - L1M2 LINE L1 -5460 1389 662 23 33 0 0 chr10 65030056 65030086 -80559202 + AT_rich Low_complexity Low_complexity 1 30 0 209 229 208 31 chr10 65031391 65031487 -80557801 - MIR SINE MIR -109 153 41 319 333 62 17 chr10 65031733 65031910 -80557378 - MIR3 SINE MIR 0 208 24 303 271 223 36 chr10 65032219 65032385 -80556903 + MIR SINE MIR 60 256 -6 598 203 176 26 chr10 65033472 65033625 -80555663 - MER5A DNA MER1_type -5 184 9 4098 198 53 6 chr10 65033769 65034651 -80554637 + MER63C DNA MER1_type 1 924 -6 2046 189 71 13 chr10 65034774 65035225 -80554063 - L1ME3A LINE L1 -8 6162 5686 358 314 53 24 chr10 65036168 65036337 -80552951 - L1ME4a LINE L1 -1 6120 5947 230 261 83 62 chr10 65036463 65036543 -80552745 - L1ME4a LINE L1 -346 5775 5698 1948 95 84 0 chr10 65036543 65036817 -80552471 - AluSg SINE Alu -13 297 1 230 261 83 62 chr10 65036817 65036977 -80552311 - L1ME4a LINE L1 -423 5698 5530 21 36 0 0 chr10 65037539 65037567 -80551721 + AT_rich Low_complexity Low_complexity 1 28 0 212 179 0 0 chr10 65037709 65037748 -80551540 + T-rich Low_complexity Low_complexity 1 39 0 644 220 147 0 chr10 65037755 65037905 -80551383 - L1ME3A LINE L1 -12 6158 5987 2029 175 6 0 chr10 65038714 65039079 -80550209 + L1MB7 LINE L1 5797 6163 -21 345 246 104 30 chr10 65039086 65039220 -80550068 - L1ME4a LINE L1 -12 6109 5966 464 309 56 11 chr10 65039857 65040035 -80549253 - MIR SINE MIR -2 260 75 362 256 96 78 chr10 65040144 65040437 -80548851 - L1M4 LINE L1 -3256 2890 2593 12814 167 76 43 chr10 65040954 65041048 -80548240 - L1MA4 LINE L1 -9 6291 6202 1953 131 158 11 chr10 65041048 65041421 -80547867 + MSTA LTR MaLR 1 428 0 12814 167 76 43 chr10 65041421 65042850 -80546438 - L1MA4 LINE L1 -98 6202 4822 865 55 0 0 chr10 65042850 65042959 -80546329 + MLT2A2 LTR ERVL 1 109 -344 12814 167 76 43 chr10 65042959 65043999 -80545289 - L1MA4 LINE L1 -1478 4822 3818 189 0 0 0 chr10 65043999 65044020 -80545268 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 1811 147 0 21 chr10 65044022 65044308 -80544980 - AluSx SINE Alu -32 280 1 12814 167 76 43 chr10 65044308 65044939 -80544349 - L1MA4 LINE L1 -2482 3818 3209 2399 166 9 32 chr10 65044939 65045372 -80543916 - MSTB LTR MaLR -2 424 2 12814 167 76 43 chr10 65045372 65045979 -80543309 - L1MA4 LINE L1 -3091 3209 2253 215 254 18 0 chr10 65046169 65046224 -80543064 + CT-rich Low_complexity Low_complexity 2 57 0 1718 159 74 40 chr10 65046288 65046639 -80542649 - THE1B LTR MaLR 0 364 2 24 32 0 0 chr10 65048153 65048184 -80541104 + AT_rich Low_complexity Low_complexity 1 31 0 365 324 74 27 chr10 65048593 65048741 -80540547 - L2 LINE L2 -4 3268 3114 460 280 40 123 chr10 65048808 65049012 -80540276 + L2 LINE L2 2521 2741 -573 2010 132 20 0 chr10 65049012 65049316 -80539972 + AluSq SINE Alu 4 313 0 1711 155 3 24 chr10 65049321 65049617 -80539671 + AluJb SINE Alu 22 311 -1 460 280 40 123 chr10 65049617 65049835 -80539453 + L2 LINE L2 2745 2913 -401 199 289 93 41 chr10 65050136 65050233 -80539055 - L2 LINE L2 -299 2973 2872 2255 113 7 3 chr10 65051211 65051521 -80537767 + AluSp SINE Alu 1 311 -2 208 288 58 58 chr10 65052358 65052497 -80536791 - L2 LINE L2 -212 3060 2922 1123 218 26 33 chr10 65052497 65052804 -80536484 + MLT1A2 LTR MaLR 1 305 -69 2535 171 47 50 chr10 65053080 65053725 -80535563 - L1MD2 LINE L1 -441 5918 5276 225 0 0 0 chr10 65055194 65055219 -80534069 + (T)n Simple_repeat Simple_repeat 1 25 0 272 340 58 27 chr10 65056035 65056223 -80533065 + MIR SINE MIR 19 212 -50 1904 98 0 4 chr10 65057342 65057586 -80531702 + AluSx SINE Alu 38 280 -32 696 289 16 11 chr10 65057913 65058103 -80531185 - MIR SINE MIR 0 262 72 180 77 0 0 chr10 65059586 65059612 -80529676 + (TG)n Simple_repeat Simple_repeat 2 27 0 363 259 67 44 chr10 65059658 65059793 -80529495 + MIR3 SINE MIR 10 147 -61 477 189 270 0 chr10 65060040 65060188 -80529100 - MER53 DNA DNA 0 189 2 2251 123 7 0 chr10 65060562 65060870 -80528418 - AluSg SINE Alu 0 310 1 4671 108 29 23 chr10 65061525 65062310 -80526978 - Tigger3b DNA MER2_type 0 1231 442 2073 170 46 21 chr10 65062582 65063017 -80526271 - Tigger3b DNA MER2_type -785 446 1 313 368 42 0 chr10 65063351 65063495 -80525793 - MIR SINE MIR -110 152 3 1606 207 10 0 chr10 65064136 65064431 -80524857 - AluJb SINE Alu -14 298 1 403 250 137 6 chr10 65064537 65064705 -80524583 + L1M4 LINE L1 3766 3955 -2191 497 270 32 8 chr10 65065167 65065293 -80523995 + MIR3 SINE MIR 28 156 -52 408 258 208 11 chr10 65065308 65065486 -80523802 + MIR SINE MIR 48 260 -2 369 357 16 8 chr10 65066812 65066938 -80522350 + MIR SINE MIR 33 159 -103 238 301 119 51 chr10 65067071 65067247 -80522041 + MIR SINE MIR 25 212 -50 2174 138 3 0 chr10 65067334 65067638 -80521650 - AluSx SINE Alu -7 305 1 221 322 167 11 chr10 65070078 65070258 -80519030 - L3b LINE CR1 -199 1384 1177 208 267 40 27 chr10 65070862 65070937 -80518351 - MIR SINE MIR -66 196 121 312 213 16 0 chr10 65071021 65071082 -80518206 + L2 LINE L2 3252 3313 0 228 86 0 0 chr10 65071169 65071204 -80518084 + (TGAA)n Simple_repeat Simple_repeat 3 37 0 22 0 0 0 chr10 65071517 65071539 -80517749 + AT_rich Low_complexity Low_complexity 1 22 0 908 119 0 15 chr10 65071918 65072052 -80517236 + FLAM_C SINE Alu 1 132 -1 1789 29 0 0 chr10 65072219 65072429 -80516859 - L1PA5 LINE L1 -1 6153 5944 432 265 197 42 chr10 65072429 65072738 -80516550 - L2 LINE L2 -23 3290 2934 1086 144 0 0 chr10 65072816 65072976 -80516312 - AluSg/x SINE Alu -5 307 148 199 303 118 13 chr10 65073990 65074066 -80515222 - L2 LINE L2 -32 3281 3198 906 302 209 50 chr10 65074241 65075171 -80514117 + L3 LINE CR1 334 1411 -166 189 304 0 0 chr10 65075243 65075289 -80513999 + L3b LINE CR1 1538 1583 0 7024 50 11 0 chr10 65076746 65078228 -80511060 + L1PA7 LINE L1 4662 6154 0 182 368 103 26 chr10 65078827 65078944 -80510344 - L3 LINE CR1 -6 1571 1446 304 330 36 77 chr10 65079320 65079514 -80509774 + L3b LINE CR1 1354 1539 -44 4478 31 0 0 chr10 65079965 65080536 -80508752 - L1P LINE L1 -3331 2815 2245 7649 20 5 0 chr10 65080536 65081777 -80507511 + L1PA2 LINE L1 4911 6155 0 486 335 115 31 chr10 65081788 65082048 -80507240 - L2 LINE L2 -129 3184 2903 226 320 65 49 chr10 65082206 65082329 -80506959 - MIR SINE MIR -65 143 20 483 266 60 40 chr10 65082733 65082932 -80506356 + MIR SINE MIR 47 249 -13 483 279 82 16 chr10 65083786 65083969 -80505319 - MIR3 SINE MIR -13 195 1 543 160 120 0 chr10 65084460 65084560 -80504728 - MER81 DNA DNA -2 112 1 541 274 71 20 chr10 65086193 65086390 -80502898 - MIR SINE MIR -20 242 36 * 569 321 91 35 chr10 65086386 65086703 -80502585 + L2 LINE L2 2862 3211 -102 1962 137 0 33 chr10 65086703 65087010 -80502278 - AluJb SINE Alu -7 305 9 569 321 91 35 chr10 65087010 65087119 -80502169 + L2 LINE L2 3211 3312 -1 1048 272 110 45 chr10 65087880 65088369 -80500919 - LTR33 LTR ERVL 0 521 1 333 323 10 0 chr10 65088405 65088501 -80500787 - MER81 DNA DNA -2 112 16 262 326 113 7 chr10 65088689 65088830 -80500458 + MIR3 SINE MIR 5 160 -48 227 309 12 0 chr10 65088907 65088988 -80500300 - MER103 DNA DNA -30 136 55 192 298 0 0 chr10 65089105 65089162 -80500126 + MIR3 SINE MIR 149 205 -3 234 290 0 43 chr10 65090916 65090985 -80498303 + MIR SINE MIR 30 95 -113 654 138 0 6 chr10 65091121 65091368 -80497920 + AluJb SINE Alu 1 294 -18 21 0 0 0 chr10 65091862 65091883 -80497405 + AT_rich Low_complexity Low_complexity 1 21 0 743 178 0 0 chr10 65092621 65092739 -80496549 + AluJb SINE Alu 1 118 -194 22 0 0 0 chr10 65092934 65092956 -80496332 + AT_rich Low_complexity Low_complexity 1 22 0 738 157 15 22 chr10 65092957 65093091 -80496197 - AluJb SINE Alu -179 133 1 2125 178 71 52 chr10 65093367 65093900 -80495388 + MER67A LTR ERV1 1 543 0 183 218 0 91 chr10 65094049 65094104 -80495184 + L2 LINE L2 3219 3268 -4 1099 163 4 75 chr10 65094836 65095088 -80494200 - MLT1B LTR MaLR -2 388 155 3921 113 93 89 chr10 65095121 65096489 -80492799 - pTR5 LTR ERV1 -1 2437 743 1920 102 27 0 chr10 65096489 65096745 -80492543 + AluSg SINE Alu 31 293 -17 623 173 0 64 chr10 65096745 65096901 -80492387 - MLT1B LTR MaLR -232 158 13 5335 92 35 9 chr10 65097066 65097826 -80491462 + LTR17 LTR ERV1 1 780 0 578 91 0 0 chr10 65097826 65097903 -80491385 + HERV17 LTR ERV1 1 77 -8549 * 5164 59 6 40 chr10 65097902 65098626 -80490662 + HERV17 LTR ERV1 1318 2016 -6610 * 27395 55 8 0 chr10 65098609 65102056 -80487232 + HERV17 LTR ERV1 2430 5902 -2724 1263 56 0 6 chr10 65102048 65102210 -80487078 + HERV17 LTR ERV1 6986 7146 -1480 * 298 51 0 0 chr10 65102207 65102246 -80487042 + HERV17 LTR ERV1 7510 7548 -1078 * 2283 61 0 3 chr10 65102236 65102529 -80486759 + HERV17 LTR ERV1 8335 8626 0 2693 98 0 10 chr10 65102529 65102918 -80486370 + LTR17 LTR ERV1 1 385 -395 224 318 0 15 chr10 65203037 65203103 -80386185 + L2 LINE L2 2998 3062 -210 999 188 38 0 chr10 65203260 65203420 -80385868 + FRAM SINE Alu 1 166 0 413 243 0 28 chr10 65203439 65203546 -80385742 - Charlie8 DNA MER1_type -2204 213 110 357 188 12 115 chr10 65203586 65203751 -80385537 - AluJb SINE Alu -19 283 165 1991 122 7 10 chr10 65206966 65207254 -80382034 - AluSq SINE Alu -26 287 1 232 331 28 49 chr10 65207255 65207397 -80381891 + MER5A DNA MER1_type 50 188 -1 4465 61 4 0 chr10 65207919 65208553 -80380735 - L1P3 LINE L1 -345 5809 5174 882 225 0 32 chr10 65208647 65208834 -80380454 + AluJo SINE Alu 7 187 -125 465 81 0 0 chr10 65209855 65209917 -80379371 + Alu SINE Alu 236 297 -13 1572 184 118 26 chr10 65209923 65210008 -80379280 + L1ME3 LINE L1 1706 1782 -4644 1641 184 3 17 chr10 65210008 65210307 -80378981 + AluJo SINE Alu 1 295 -17 1572 184 118 26 chr10 65210307 65210633 -80378655 + L1ME3 LINE L1 1782 2102 -4324 1113 116 0 0 chr10 65210633 65210779 -80378509 + AluSg SINE Alu 1 146 -164 1383 200 43 59 chr10 65210781 65210911 -80378377 + L1ME3 LINE L1 2108 2239 -4187 1915 137 50 0 chr10 65210911 65211188 -80378100 - AluSx SINE Alu -21 291 1 1383 200 43 59 chr10 65211188 65211281 -80378007 + L1ME3 LINE L1 2239 2332 -4094 1442 204 16 10 chr10 65211281 65211608 -80377680 + AluJo SINE Alu 1 312 0 1383 200 43 59 chr10 65211608 65212017 -80377271 + L1ME3 LINE L1 2332 2740 -3686 996 262 89 55 chr10 65212042 65212205 -80377083 - MER21B LTR ERV1 -194 669 513 1992 134 0 10 chr10 65212205 65212510 -80376778 + AluSg SINE Alu 1 302 -8 996 262 89 55 chr10 65212510 65212785 -80376503 - MER21B LTR ERV1 -350 513 216 1465 253 118 13 chr10 65212788 65213656 -80375632 + L1ME3 LINE L1 5020 5979 -463 2081 89 0 38 chr10 65213658 65213973 -80375315 + AluY SINE Alu 1 304 0 1303 92 12 0 chr10 65213976 65214149 -80375139 + AluSc SINE Alu 132 306 -3 1432 200 13 30 chr10 65214155 65214455 -80374833 + AluJo SINE Alu 1 295 -17 1305 241 38 24 chr10 65214455 65214878 -80374410 + L1ME3 LINE L1 5976 6404 -38 2441 65 0 0 chr10 65214885 65215178 -80374110 + AluY SINE Alu 1 293 -18 561 153 12 0 chr10 65215210 65215295 -80373993 - FRAM SINE Alu -18 158 73 543 201 16 54 chr10 65215481 65215620 -80373668 + L1MCa LINE L1 1026 1158 -5268 2025 148 6 10 chr10 65215620 65215931 -80373357 + AluSx SINE Alu 1 310 -2 543 201 16 54 chr10 65215931 65215975 -80373313 + L1MCa LINE L1 1158 1202 -5224 1457 207 26 42 chr10 65215996 65216265 -80373023 + L1MCa LINE L1 1151 1423 -5003 2091 113 3 7 chr10 65216265 65216588 -80372700 + AluSg SINE Alu 1 310 0 1457 207 26 42 chr10 65216588 65216740 -80372548 + L1MCa LINE L1 1423 1567 -4859 2280 102 0 3 chr10 65216740 65217034 -80372254 + AluSx SINE Alu 1 293 -19 666 75 0 0 chr10 65217151 65217231 -80372057 - MADE1 DNA Mariner 0 80 1 1004 224 98 75 chr10 65217574 65217972 -80371316 - MLT1I LTR MaLR -2 407 1 389 232 0 0 chr10 65217993 65218062 -80371226 - MER47A DNA MER2_type 0 366 298 2133 133 3 0 chr10 65218067 65218369 -80370919 + AluSx SINE Alu 3 305 -7 2222 113 13 3 chr10 65218390 65218700 -80370588 + AluSq SINE Alu 1 313 0 1198 160 45 139 chr10 65218758 65219066 -80370222 + MSTB1 LTR MaLR 88 355 -77 2100 118 6 13 chr10 65219066 65219381 -80369907 - AluSq SINE Alu 0 313 1 1198 160 45 139 chr10 65219381 65219453 -80369835 + MSTB1 LTR MaLR 355 432 0 * 1808 152 3 3 chr10 65219453 65219735 -80369553 - MER47A DNA MER2_type -84 282 1 446 100 75 75 chr10 65219860 65219940 -80369348 + MADE1 DNA Mariner 1 80 0 717 251 64 21 chr10 65219988 65220273 -80369015 - L1MC/D LINE L1 -318 5803 5521 509 272 42 56 chr10 65220338 65220377 -80368911 - MIR SINE MIR -16 246 208 1266 165 76 22 chr10 65220377 65220601 -80368687 - MER46A DNA MER2_type 0 236 1 509 272 42 56 chr10 65220601 65220746 -80368542 - MIR SINE MIR -54 208 62 2237 158 49 55 chr10 65220746 65221195 -80368093 + MER31B LTR ERV1 1 451 -15 198 0 0 0 chr10 65221195 65221217 -80368071 + (TA)n Simple_repeat Simple_repeat 2 23 0 2463 52 0 0 chr10 65221217 65221504 -80367784 - AluY SINE Alu -24 287 1 2237 158 49 55 chr10 65221504 65221522 -80367766 + MER31B LTR ERV1 449 466 0 509 272 42 56 chr10 65221522 65221549 -80367739 - MIR SINE MIR -200 62 37 931 238 57 9 chr10 65221667 65221894 -80367394 + MIR SINE MIR 4 241 -21 454 302 115 35 chr10 65222273 65222561 -80366727 + L2 LINE L2 3001 3311 -2 194 292 247 0 chr10 65222677 65222766 -80366522 - MIR SINE MIR -61 147 37 194 150 25 0 chr10 65222950 65222990 -80366298 + GA-rich Low_complexity Low_complexity 4 44 0 275 297 86 47 chr10 65223430 65223558 -80365730 - MIR SINE MIR -110 152 20 619 274 30 103 chr10 65223610 65223979 -80365309 - MLT1J LTR MaLR -16 495 154 849 166 133 0 chr10 65224809 65224960 -80364328 - FAM SINE Alu -4 171 1 193 106 21 21 chr10 65224968 65225015 -80364273 + (TTTTTA)n Simple_repeat Simple_repeat 2 48 0 1969 120 16 26 chr10 65225047 65225356 -80363932 + AluJb SINE Alu 3 308 -4 1901 108 49 28 chr10 65225360 65225697 -80363591 + AluSx SINE Alu 1 312 0 720 297 99 53 chr10 65225998 65226810 -80362478 - L1MC4a LINE L1 -743 5403 4944 2272 81 3 7 chr10 65226810 65227106 -80362182 - AluY SINE Alu -16 295 1 720 297 99 53 chr10 65227106 65227588 -80361700 - L1MC4a LINE L1 -1202 4944 4485 1975 86 71 0 chr10 65228130 65228398 -80360890 + AluSg1 SINE Alu 1 287 -22 193 353 67 8 chr10 65228529 65228648 -80360640 + L2 LINE L2 3180 3305 -8 1267 223 29 18 chr10 65228899 65229173 -80360115 + MLT1A1 LTR MaLR 1 277 -88 400 345 0 7 chr10 65229617 65229756 -80359532 + MIR SINE MIR 2 139 -123 180 77 0 0 chr10 65230383 65230409 -80358879 + (TG)n Simple_repeat Simple_repeat 1 26 0 330 132 0 0 chr10 65230460 65230513 -80358775 + (CA)n Simple_repeat Simple_repeat 2 54 0 406 354 57 37 chr10 65231080 65231433 -80357855 - L1MC4a LINE L1 -1709 4437 4078 729 219 61 36 chr10 65231486 65231682 -80357606 + L1ME2 LINE L1 5935 6135 -29 240 302 49 65 chr10 65231686 65232054 -80357234 - L1M4 LINE L1 -847 5299 4938 21 0 0 0 chr10 65232155 65232176 -80357112 + AT_rich Low_complexity Low_complexity 1 21 0 354 264 175 44 chr10 65232260 65232688 -80356600 - L1M4 LINE L1 -2388 3758 3275 388 299 7 20 chr10 65232863 65233010 -80356278 + MIR SINE MIR 118 262 0 948 197 19 14 chr10 65233590 65233798 -80355490 - MER3 DNA MER1_type 0 209 1 1202 66 13 0 chr10 65234106 65234258 -80355030 - AluSp/q SINE Alu -1 312 159 677 289 130 22 chr10 65235390 65235824 -80353464 + L2 LINE L2 2791 3271 -1 2154 93 11 0 chr10 65235836 65236158 -80353130 + AluSx SINE Alu 1 325 0 499 232 104 0 chr10 65236220 65236345 -80352943 + MIR SINE MIR 47 184 -78 26 0 0 0 chr10 65238323 65238349 -80350939 + AT_rich Low_complexity Low_complexity 1 26 0 243 0 0 0 chr10 65239769 65239796 -80349492 + (A)n Simple_repeat Simple_repeat 1 27 0 2061 118 7 0 chr10 65243640 65243928 -80345360 + AluSq SINE Alu 21 310 -3 468 86 0 0 chr10 65243928 65243998 -80345290 + (GGAA)n Simple_repeat Simple_repeat 1 70 0 2252 107 0 7 chr10 65245281 65245579 -80343709 + AluSx SINE Alu 1 296 -16 2578 58 3 0 chr10 65246121 65246429 -80342859 - AluY SINE Alu -2 309 1 1535 173 32 7 chr10 65246579 65246735 -80342553 - AluJb SINE Alu -22 290 122 2244 72 36 0 chr10 65246735 65247014 -80342274 - AluY SINE Alu -8 303 15 1535 173 32 7 chr10 65247014 65247140 -80342148 - AluJb SINE Alu -190 122 1 564 182 55 0 chr10 65248099 65248209 -80341079 - L2 LINE L2 -10 3303 3188 481 265 148 12 chr10 65248217 65248379 -80340909 - MIR SINE MIR -31 231 48 258 116 0 0 chr10 65250120 65250163 -80339125 + (T)n Simple_repeat Simple_repeat 1 43 0 192 111 0 0 chr10 65250364 65250400 -80338888 + (TG)n Simple_repeat Simple_repeat 2 37 0 181 324 20 39 chr10 65251744 65251846 -80337442 + L2 LINE L2 2694 2793 -521 1914 129 71 0 chr10 65252346 65252626 -80336662 + AluSx SINE Alu 1 300 -12 376 248 27 67 chr10 65254013 65254212 -80335076 - MIR SINE MIR -48 214 21 1415 183 111 0 chr10 65254979 65255241 -80334047 - AluJb SINE Alu -21 291 1 1836 126 0 69 chr10 65256870 65257187 -80332101 - AluSx SINE Alu -13 299 5 335 278 24 16 chr10 65257268 65257394 -80331894 + MER117 DNA MER1_type 20 146 -51 220 265 261 21 chr10 65257624 65257949 -80331339 + L3 LINE CR1 975 1377 -200 397 300 133 31 chr10 65258071 65258364 -80330924 + MER102b DNA MER1_type 15 337 -4 1053 216 103 10 chr10 65258381 65258673 -80330615 - MER5C DNA MER1_type -5 319 1 873 261 302 8 chr10 65260936 65261538 -80327750 + LTR50 LTR ERVL 17 795 0 2503 82 0 0 chr10 65262115 65262418 -80326870 + AluSc SINE Alu 1 303 -6 23 0 0 0 chr10 65264252 65264275 -80325013 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr10 65264903 65264924 -80324364 + AT_rich Low_complexity Low_complexity 1 21 0 305 248 98 39 chr10 65265604 65265757 -80323531 - MIR SINE MIR -71 191 30 2465 51 10 0 chr10 65266066 65266361 -80322927 + AluSp SINE Alu 1 298 -15 315 267 87 82 chr10 65266429 65266635 -80322653 - L2 LINE L2 0 3313 3107 372 115 4 13 chr10 65267583 65267665 -80321623 - Alu SINE Alu 0 302 250 991 138 181 0 chr10 65269439 65269627 -80319661 + L1MB8 LINE L1 5899 6120 -58 375 215 81 54 chr10 65270148 65270297 -80318991 + MIR SINE MIR 60 212 -50 293 233 192 8 chr10 65270540 65270660 -80318628 - MER103 DNA DNA -2 164 23 233 314 88 22 chr10 65270762 65270899 -80318389 - MIR SINE MIR 0 262 117 454 246 157 34 chr10 65270999 65271235 -80318053 - LTR33 LTR ERVL -229 292 28 231 365 57 38 chr10 65271277 65271436 -80317852 - L2 LINE L2 -12 3260 3099 1019 151 39 78 chr10 65271524 65271729 -80317559 - MER58A DNA MER1_type -26 198 2 1318 175 70 38 chr10 65272731 65272887 -80316401 + MER33 DNA MER1_type 1 151 -2434 2218 104 19 7 chr10 65272887 65273194 -80316094 - AluY SINE Alu 0 311 1 1318 175 70 38 chr10 65273194 65273351 -80315937 + MER33 DNA MER1_type 151 324 0 310 172 23 69 chr10 65273351 65273438 -80315850 - Charlie2a DNA MER1_type -32 2830 2748 900 240 32 18 chr10 65273439 65273718 -80315570 - Charlie2a DNA MER1_type -1853 1009 727 770 257 286 5 chr10 65273709 65274079 -80315209 - Charlie2a DNA MER1_type -2388 474 1 * 1557 126 10 80 chr10 65274703 65275005 -80314283 - L1MB4 LINE L1 -4 6176 5896 288 0 0 0 chr10 65275007 65275039 -80314249 + (CA)n Simple_repeat Simple_repeat 2 33 0 2389 170 70 14 chr10 65275039 65275709 -80313579 - L1MB4 LINE L1 -401 5779 5082 2363 87 0 7 chr10 65275713 65276011 -80313277 + AluSp SINE Alu 1 296 -17 29 0 0 0 chr10 65277002 65277031 -80312257 + AT_rich Low_complexity Low_complexity 1 29 0 330 26 0 0 chr10 65277086 65277125 -80312163 + (CA)n Simple_repeat Simple_repeat 2 40 0 22 35 0 0 chr10 65278208 65278237 -80311051 + AT_rich Low_complexity Low_complexity 1 29 0 186 43 0 0 chr10 65280317 65280340 -80308948 + (TTA)n Simple_repeat Simple_repeat 2 24 0 573 173 10 10 chr10 65280399 65280503 -80308785 + FLAM_A SINE Alu 26 129 -13 30 0 0 0 chr10 65280851 65280881 -80308407 + AT_rich Low_complexity Low_complexity 1 30 0 317 283 62 9 chr10 65280940 65281053 -80308235 - MER5A DNA MER1_type -3 186 68 1433 245 68 21 chr10 65282774 65283158 -80306130 - MLT1I LTR MaLR 0 409 8 2347 159 74 3 chr10 65283248 65283638 -80305650 - MER47B DNA MER2_type 0 418 1 462 63 38 0 chr10 65284776 65284855 -80304433 + (TAGA)n Simple_repeat Simple_repeat 1 82 0 213 211 0 0 chr10 65284874 65284912 -80304376 + (CA)n Simple_repeat Simple_repeat 1 38 0 371 288 75 14 chr10 65289158 65289304 -80299984 + MIR SINE MIR 1 155 -107 2159 125 3 3 chr10 65290125 65290437 -80298851 + AluSq SINE Alu 1 312 -1 208 206 122 103 chr10 65291196 65291303 -80297985 + L2 LINE L2 3175 3283 -30 261 0 0 0 chr10 65291305 65291334 -80297954 + (TTCA)n Simple_repeat Simple_repeat 3 31 0 268 337 11 11 chr10 65291343 65291432 -80297856 - L2 LINE L2 -20 3293 3205 311 271 104 0 chr10 65291486 65291582 -80297706 + MIR SINE MIR 155 260 -2 685 226 67 113 chr10 65291763 65292027 -80297261 + L2 LINE L2 2943 3185 -128 342 0 0 0 chr10 65292027 65292065 -80297223 + (CA)n Simple_repeat Simple_repeat 2 39 0 685 226 67 113 chr10 65292065 65292189 -80297099 + L2 LINE L2 3185 3313 0 260 236 309 9 chr10 65292208 65292318 -80296970 - MIR SINE MIR -100 162 20 358 240 292 0 chr10 65292550 65292704 -80296584 + L2 LINE L2 2577 2775 -539 192 284 74 12 chr10 65293464 65293545 -80295743 - MIR SINE MIR -120 142 57 188 359 0 65 chr10 65293800 65293892 -80295396 - L2 LINE L2 -218 3054 2969 1339 143 83 56 chr10 65296228 65296313 -80292975 + AluJb SINE Alu 25 106 -206 234 0 0 0 chr10 65296313 65296339 -80292949 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 1339 143 83 56 chr10 65296339 65296519 -80292769 + AluJb SINE Alu 106 297 -15 366 258 52 10 chr10 65296519 65296616 -80292672 - MIR SINE MIR -154 108 8 183 315 98 22 chr10 65297169 65297261 -80292027 - MER5A DNA MER1_type 0 189 91 2940 132 57 8 chr10 65297278 65297760 -80291528 - L1MA8 LINE L1 -3 6288 5780 198 0 0 0 chr10 65297760 65297782 -80291506 + (TA)n Simple_repeat Simple_repeat 1 22 0 2940 132 57 8 chr10 65297782 65297793 -80291495 - L1MA8 LINE L1 -511 5780 5771 610 115 29 86 chr10 65297800 65297939 -80291349 - L1MA4 LINE L1 -6 6294 6164 1727 75 4 21 chr10 65297941 65298182 -80291106 - L1MA8 LINE L1 -521 5779 5543 244 346 79 0 chr10 65298543 65298670 -80290618 + MIR3 SINE MIR 19 155 -53 198 226 19 19 chr10 65298881 65298934 -80290354 + MIR3 SINE MIR 151 203 -5 216 147 0 0 chr10 65299059 65299093 -80290195 - MIR SINE MIR -14 248 215 422 299 64 21 chr10 65299199 65299386 -80289902 - MIR SINE MIR -49 213 19 2269 114 3 0 chr10 65299580 65299888 -80289400 - AluSx SINE Alu -3 309 1 752 237 137 0 chr10 65300098 65300288 -80289000 + MER58A DNA MER1_type 9 224 0 469 209 52 64 chr10 65300304 65300476 -80288812 - MER104 DNA Tc2 -6 174 5 1855 128 4 0 chr10 65301171 65301428 -80287860 + AluSx SINE Alu 36 293 -19 360 0 0 0 chr10 65304995 65305035 -80284253 + (TA)n Simple_repeat Simple_repeat 2 41 0 1436 173 15 28 chr10 65306310 65306615 -80282673 + MER61B LTR ERV1 1 396 -29 183 243 0 0 chr10 65307982 65308019 -80281269 + MIR SINE MIR 117 153 -109 250 333 31 25 chr10 65308081 65308240 -80281048 - L2 LINE L2 -1 3312 3153 298 237 58 101 chr10 65310301 65310440 -80278848 - L2 LINE L2 0 3272 3140 25 0 0 0 chr10 65310528 65310553 -80278735 + AT_rich Low_complexity Low_complexity 1 25 0 2344 84 0 16 chr10 65311262 65311570 -80277718 - AluY SINE Alu 0 311 9 353 264 24 72 chr10 65311710 65311835 -80277453 + L2 LINE L2 2960 3078 -194 587 246 74 45 chr10 65312434 65312642 -80276646 + MIR SINE MIR 17 216 -46 2331 98 14 0 chr10 65312644 65312940 -80276348 + AluSx SINE Alu 1 300 -12 221 239 0 6 chr10 65313486 65313576 -80275712 - MIR SINE MIR -2 260 121 2480 80 0 6 chr10 65314083 65314396 -80274892 - AluSq SINE Alu -2 311 1 1863 146 0 7 chr10 65314919 65315207 -80274081 + AluSc SINE Alu 1 286 -23 249 396 30 30 chr10 65315301 65315470 -80273818 - L3b LINE CR1 -28 1555 1387 332 238 40 59 chr10 65315578 65315601 -80273687 - MIR3 SINE MIR -23 185 163 795 282 99 53 chr10 65315601 65315924 -80273364 - MER102b DNA MER1_type -1 340 3 332 238 40 59 chr10 65315924 65316001 -80273287 - MIR3 SINE MIR -45 163 87 1253 181 58 36 chr10 65316011 65316287 -80273001 + AluJo SINE Alu 1 282 -30 180 253 84 84 chr10 65316309 65316392 -80272896 + L2 LINE L2 3158 3240 -32 2291 96 7 0 chr10 65316403 65316706 -80272582 + AluSg SINE Alu 1 305 -5 200 196 0 0 chr10 65317233 65317279 -80272009 + CT-rich Low_complexity Low_complexity 1 46 0 283 323 85 55 chr10 65317669 65317904 -80271384 - MIR SINE MIR 0 262 21 241 77 0 51 chr10 65318141 65318180 -80271108 - Alu SINE Alu -185 117 81 225 0 0 0 chr10 65318275 65318300 -80270988 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 2009 124 0 0 chr10 65318310 65318593 -80270695 - AluSq SINE Alu -30 283 1 289 262 138 21 chr10 65319245 65319390 -80269898 + MIR3 SINE MIR 44 205 -3 23 0 0 0 chr10 65320727 65320750 -80268538 + AT_rich Low_complexity Low_complexity 1 23 0 192 77 0 0 chr10 65320839 65320865 -80268423 + (A)n Simple_repeat Simple_repeat 1 26 0 191 122 0 24 chr10 65322593 65322634 -80266654 + (TC)n Simple_repeat Simple_repeat 2 41 0 194 156 22 0 chr10 65322808 65322853 -80266435 + (TA)n Simple_repeat Simple_repeat 1 46 0 1773 153 25 19 chr10 65323029 65323350 -80265938 - MER33 DNA MER1_type 0 324 2 2291 91 0 13 chr10 65325098 65325405 -80263883 + AluY SINE Alu 1 303 -8 1554 160 64 14 chr10 65326844 65327125 -80262163 - AluJo SINE Alu -9 303 9 2060 90 0 15 chr10 65327917 65328185 -80261103 - AluSg SINE Alu -13 297 34 378 57 0 0 chr10 65329460 65329513 -80259775 + (TG)n Simple_repeat Simple_repeat 2 54 0 789 284 20 20 chr10 65329521 65329771 -80259517 + MIR SINE MIR 13 262 0 199 227 23 0 chr10 65329816 65329860 -80259428 - L2 LINE L2 -3 3269 3225 193 317 69 32 chr10 65336321 65336466 -80252822 - MIR3 SINE MIR -70 192 15 231 365 57 38 chr10 65337380 65337539 -80251749 + L2 LINE L2 3099 3260 -12 454 246 157 34 chr10 65337581 65337817 -80251471 + LTR33 LTR ERVL 28 292 -229 2100 128 0 3 chr10 65338656 65338987 -80250301 + AluSq SINE Alu 1 313 0 293 254 0 15 chr10 65340831 65340898 -80248390 + MIR SINE MIR 81 146 -62 225 0 0 0 chr10 65340925 65340950 -80248338 + (T)n Simple_repeat Simple_repeat 1 25 0 194 108 54 0 chr10 65341737 65341774 -80247514 + GA-rich Low_complexity Low_complexity 2 40 0 644 239 18 50 chr10 65341870 65342088 -80247200 + MER34 LTR ERV1 1 211 -331 254 326 45 45 chr10 65342534 65342666 -80246622 + L2 LINE L2 3168 3299 -14 927 172 135 0 chr10 65346788 65346980 -80242308 - MER58A DNA MER1_type 0 224 7 600 279 82 49 chr10 65348259 65348503 -80240785 - MIR SINE MIR -8 254 3 351 294 73 7 chr10 65348717 65348853 -80240435 - MIR SINE MIR -17 245 101 1102 205 19 30 chr10 65350085 65350209 -80239079 - ORSL DNA AcHobo -15 260 136 2268 112 0 3 chr10 65350209 65350513 -80238775 + AluSq SINE Alu 1 303 -10 1102 205 19 30 chr10 65350513 65350651 -80238637 - ORSL DNA AcHobo -139 136 1 583 250 195 15 chr10 65351417 65351617 -80237671 + MIR SINE MIR 13 248 -14 2150 141 0 0 chr10 65351677 65351981 -80237307 - AluSx SINE Alu -8 304 1 1568 0 0 0 chr10 65354268 65354436 -80234852 - AluYb8 SINE Alu 0 318 151 389 274 53 0 chr10 65354663 65354776 -80234512 + L2 LINE L2 3152 3270 -2 377 230 56 39 chr10 65355268 65355411 -80233877 + MIR SINE MIR 37 174 -62 1774 94 82 0 chr10 65356932 65357176 -80232112 + AluSg SINE Alu 35 298 -12 1019 254 61 64 chr10 65357651 65357800 -80231488 - MLT1J1 LTR MaLR -7 439 291 2354 133 123 5 chr10 65357800 65358183 -80231105 - MSTA LTR MaLR 0 428 1 1019 254 61 64 chr10 65358183 65358473 -80230815 - MLT1J1 LTR MaLR -155 291 1 295 255 176 10 chr10 65358795 65358897 -80230391 - MIR SINE MIR -67 141 23 1250 242 42 15 chr10 65358950 65359323 -80229965 + LTR16C LTR ERVL 50 491 0 4323 175 106 29 chr10 65359524 65359620 -80229668 - L1MB7 LINE L1 -20 6164 6077 1780 178 65 41 chr10 65359620 65360007 -80229281 - MSTD LTR MaLR 0 396 1 4323 175 106 29 chr10 65360007 65361116 -80228172 - L1MB7 LINE L1 -107 6077 4838 2112 138 0 10 chr10 65361116 65361414 -80227874 + AluSx SINE Alu 1 295 -17 4323 175 106 29 chr10 65361414 65361616 -80227672 - L1MB7 LINE L1 -1346 4838 4653 388 312 59 21 chr10 65361869 65362055 -80227233 + MIR SINE MIR 28 220 -42 1828 164 7 7 chr10 65363003 65363308 -80225980 + AluJb SINE Alu 1 305 -7 1824 107 0 101 chr10 65363608 65363935 -80225353 - AluSx SINE Alu -14 298 5 2989 172 38 82 chr10 65363948 65364201 -80225087 - L1MB3 LINE L1 0 6183 5920 216 0 0 0 chr10 65364201 65364225 -80225063 + (CA)n Simple_repeat Simple_repeat 1 24 0 2989 172 38 82 chr10 65364225 65364523 -80224765 - L1MB3 LINE L1 -263 5920 5673 2311 72 14 0 chr10 65364523 65364815 -80224473 - AluY SINE Alu -15 296 1 2989 172 38 82 chr10 65364815 65365035 -80224253 - L1MB3 LINE L1 -510 5673 5445 300 142 83 142 chr10 65365045 65365165 -80224123 - L1M3 LINE L1 -645 5538 5426 14646 191 38 45 chr10 65365916 65366154 -80223134 + L1MA5 LINE L1 1375 1613 -5389 1891 124 33 7 chr10 65366154 65366464 -80222824 + AluSx SINE Alu 1 317 0 14646 191 38 45 chr10 65366464 65369197 -80220091 + L1MA5 LINE L1 1613 4363 -2639 1705 96 8 0 chr10 65369197 65369435 -80219853 + L1MA3 LINE L1 6064 6305 0 14646 191 38 45 chr10 65369435 65369453 -80219835 + L1MA5 LINE L1 4363 4380 -2622 1459 198 13 45 chr10 65369453 65369585 -80219703 + AluJo SINE Alu 2 137 -175 2261 107 0 0 chr10 65369585 65369876 -80219412 + AluSc SINE Alu 1 291 -18 1459 198 13 45 chr10 65369876 65370056 -80219232 + AluJo SINE Alu 137 304 -8 14646 191 38 45 chr10 65370056 65372059 -80217229 + L1MA5 LINE L1 4380 6395 -607 255 61 0 0 chr10 65372059 65372092 -80217196 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 2075 99 14 11 chr10 65372097 65372379 -80216909 - AluSq SINE Alu -30 283 1 14646 191 38 45 chr10 65372379 65372487 -80216801 + L1MA5 LINE L1 6399 6506 -496 315 0 0 0 chr10 65372487 65372522 -80216766 + (CA)n Simple_repeat Simple_repeat 2 36 0 207 0 0 0 chr10 65372521 65372544 -80216744 + (GA)n Simple_repeat Simple_repeat 2 24 0 * 14646 191 38 45 chr10 65372522 65372857 -80216431 + L1MA5 LINE L1 6506 6799 -203 2021 105 3 74 chr10 65372857 65373181 -80216107 - AluSx SINE Alu -3 309 9 14646 191 38 45 chr10 65373181 65373382 -80215906 + L1MA5 LINE L1 6799 7000 -2 209 357 62 9 chr10 65373477 65373589 -80215699 - L2 LINE L2 -569 2745 2628 2280 102 0 3 chr10 65373597 65373891 -80215397 + AluSx SINE Alu 1 293 -19 666 75 0 0 chr10 65374008 65374088 -80215200 - MADE1 DNA Mariner 0 80 1 1004 224 98 75 chr10 65374431 65374829 -80214459 - MLT1I LTR MaLR -2 407 1 389 232 0 0 chr10 65374850 65374919 -80214369 - Tigger5 DNA MER2_type 0 2323 2255 2133 133 3 0 chr10 65374924 65375226 -80214062 + AluSx SINE Alu 3 305 -7 2195 116 13 3 chr10 65375247 65375557 -80213731 + AluSq SINE Alu 1 313 0 570 184 19 10 chr10 65375784 65375907 -80213381 + AluSg/x SINE Alu 179 302 0 1620 198 10 10 chr10 65375907 65376215 -80213073 - MER65C LTR ERV1 -153 308 1 277 289 72 82 chr10 65376215 65376409 -80212879 + L3 LINE CR1 1368 1559 -18 306 0 0 0 chr10 65376416 65376450 -80212838 + (CA)n Simple_repeat Simple_repeat 2 35 0 3841 182 50 14 chr10 65378334 65379174 -80210114 + L1 LINE L1 4119 4988 -1158 558 190 26 1 chr10 65379391 65379520 -80209768 + L1MEc LINE L1 2129 2243 -4183 1299 120 73 0 chr10 65379520 65379711 -80209577 - AluSg/x SINE Alu -21 291 87 6076 58 3 4 chr10 65380713 65381546 -80207742 - L1PA7 LINE L1 -149 6005 5174 961 201 0 30 chr10 65381644 65381843 -80207445 + AluJo SINE Alu 11 203 -109 295 248 20 39 chr10 65381934 65382077 -80207211 + CT-rich Low_complexity Low_complexity 1 140 0 848 200 14 48 chr10 65383742 65383952 -80205336 - AluSq SINE Alu -2 311 109 283 323 85 55 chr10 65384667 65384902 -80204386 + MIR SINE MIR 21 262 0 200 196 0 0 chr10 65385292 65385338 -80203950 + GA-rich Low_complexity Low_complexity 1 46 0 2137 107 0 13 chr10 65385865 65386174 -80203114 - AluSg SINE Alu -5 305 1 684 236 43 35 chr10 65386189 65386443 -80202845 - L1MCa LINE L1 -5020 1406 1151 566 211 14 66 chr10 65386464 65386508 -80202780 - L1MCa LINE L1 -5224 1202 1157 2025 148 6 10 chr10 65386508 65386819 -80202469 - AluSx SINE Alu -2 310 1 566 211 14 66 chr10 65386819 65386987 -80202301 - L1MCa LINE L1 -5269 1157 1001 272 50 0 50 chr10 65386997 65387069 -80202219 - Alu SINE Alu 0 302 255 384 22 0 0 chr10 65488742 65488787 -80100501 + (TG)n Simple_repeat Simple_repeat 2 46 0 1160 150 0 0 chr10 65490125 65490292 -80098996 + AluJb SINE Alu 129 295 -17 1446 200 75 102 chr10 65490454 65490975 -80098313 + MLT1F1 LTR MaLR 61 567 0 23 33 0 0 chr10 65491413 65491443 -80097845 + AT_rich Low_complexity Low_complexity 1 30 0 1952 84 15 26 chr10 65491540 65491813 -80097475 + AluSq SINE Alu 38 307 -6 1976 122 3 24 chr10 65493099 65493387 -80095901 - AluSx SINE Alu -30 282 1 368 219 10 31 chr10 65493793 65493889 -80095399 - MIR SINE MIR -119 143 50 643 261 35 49 chr10 65494487 65494589 -80094699 + Charlie8 DNA MER1_type 2 104 -237 1501 103 0 10 chr10 65494589 65494817 -80094471 + AluSg/x SINE Alu 79 304 0 643 261 35 49 chr10 65494817 65494939 -80094349 + Charlie8 DNA MER1_type 104 224 -117 932 175 38 0 chr10 65494958 65495118 -80094170 - FRAM SINE Alu 0 166 1 204 318 0 15 chr10 65495275 65495341 -80093947 - L2 LINE L2 -210 3062 2998 415 289 43 66 chr10 65495429 65495640 -80093648 + MIR SINE MIR 1 206 -56 22 0 0 0 chr10 65495667 65495689 -80093599 + AT_rich Low_complexity Low_complexity 1 22 0 968 184 40 0 chr10 65495690 65495864 -80093424 - MER58A DNA MER1_type -1 223 43 1296 164 0 14 chr10 65495865 65496079 -80093209 + AluSg/x SINE Alu 85 295 -17 2136 125 0 0 chr10 65496082 65496398 -80092890 + AluSx SINE Alu 1 316 0 230 238 0 0 chr10 65496399 65496441 -80092847 - MER58A DNA MER1_type -174 50 9 440 215 22 117 chr10 65497232 65497455 -80091833 + MIR SINE MIR 49 250 -12 295 204 82 102 chr10 65497681 65497779 -80091509 + L2 LINE L2 3193 3288 -25 2098 81 3 18 chr10 65498087 65498370 -80090918 + AluSp SINE Alu 1 279 -34 322 315 73 18 chr10 65498623 65498788 -80090500 + MIR3 SINE MIR 29 202 -6 336 200 0 0 chr10 65499472 65499552 -80089736 + (TA)n Simple_repeat Simple_repeat 1 80 0 1405 101 40 142 chr10 65499559 65499905 -80089383 - L1MA9 LINE L1 0 6312 6002 2657 42 0 0 chr10 65502546 65502852 -80086436 + AluY SINE Alu 1 306 -5 570 186 9 9 chr10 65503027 65503140 -80086148 + L2 LINE L2 3188 3300 -13 2421 76 26 3 chr10 65503342 65503645 -80085643 - AluY SINE Alu -1 310 1 22 0 0 0 chr10 65504023 65504045 -80085243 + AT_rich Low_complexity Low_complexity 1 22 0 1026 208 66 9 chr10 65504247 65504459 -80084829 - MER58A DNA MER1_type 0 224 1 297 272 105 49 chr10 65504600 65504762 -80084526 - MIR SINE MIR -6 256 86 771 206 38 27 chr10 65505180 65505364 -80083924 - MIR SINE MIR 0 262 77 262 297 9 54 chr10 65505383 65505494 -80083794 - MER5A DNA MER1_type -48 141 36 321 316 66 20 chr10 65506035 65506187 -80083101 - MIR SINE MIR -50 212 54 299 209 252 0 chr10 65506568 65506668 -80082620 + MIR SINE MIR 42 167 -63 186 43 0 0 chr10 65508062 65508085 -80081203 + (AGGGGG)n Simple_repeat Simple_repeat 5 27 0 1117 140 11 22 chr10 65508976 65509154 -80080134 - AluSx SINE Alu -136 176 1 2027 105 53 3 chr10 65509843 65510128 -80079160 + AluSc SINE Alu 1 299 -10 2260 115 3 6 chr10 65510939 65511251 -80078037 + AluSx SINE Alu 1 311 -1 2151 121 0 0 chr10 65511587 65511876 -80077412 - AluSg SINE Alu -21 289 1 181 178 44 15 chr10 65512425 65512560 -80076728 + (TA)n Simple_repeat Simple_repeat 2 140 0 194 248 28 121 chr10 65512808 65512949 -80076339 - MIR SINE MIR -70 192 65 2148 101 0 11 chr10 65515698 65516009 -80073279 - AluSq SINE Alu 0 308 1 232 331 28 49 chr10 65516010 65516152 -80073136 + MER5A DNA MER1_type 50 188 -1 521 255 146 33 chr10 65517277 65517489 -80071799 - MIR SINE MIR -6 256 21 315 0 0 0 chr10 65517517 65517552 -80071736 + (A)n Simple_repeat Simple_repeat 1 35 0 387 0 0 0 chr10 65517552 65517595 -80071693 + (TA)n Simple_repeat Simple_repeat 1 43 0 360 0 0 0 chr10 65519516 65519556 -80069732 + (CA)n Simple_repeat Simple_repeat 2 41 0 372 291 154 0 chr10 65521423 65521533 -80067755 - MIR3 SINE MIR -48 160 34 441 275 0 18 chr10 65521545 65521654 -80067634 + MIR SINE MIR 28 134 -128 2196 103 3 0 chr10 65521892 65522184 -80067104 - AluSx SINE Alu -19 293 1 334 168 242 63 chr10 65522215 65522405 -80066883 - MER113 DNA MER1_type? -297 224 1 1725 193 19 22 chr10 65522417 65522779 -80066509 + Charlie1b DNA MER1_type 5 365 -158 1466 216 38 63 chr10 65522791 65523267 -80066021 - L1ME1 LINE L1 -18 6148 5685 11922 129 23 12 chr10 65523267 65523491 -80065797 + Tigger1 DNA MER2_type 1 221 -2197 2356 98 0 0 chr10 65523491 65523787 -80065501 - AluSg SINE Alu -14 296 1 11922 129 23 12 chr10 65523787 65525420 -80063868 + Tigger1 DNA MER2_type 221 1878 -540 1106 169 108 8 chr10 65525420 65525680 -80063608 - AluJo SINE Alu 0 312 27 3209 142 25 34 chr10 65525680 65525887 -80063401 + Tigger1 DNA MER2_type 1867 2074 -344 1465 158 17 0 chr10 65525887 65526121 -80063167 + AluJb SINE Alu 75 312 0 3209 142 25 34 chr10 65526121 65526470 -80062818 + Tigger1 DNA MER2_type 2074 2418 0 1826 210 40 35 chr10 65526471 65527189 -80062099 - L1ME1 LINE L1 -481 5685 4964 951 128 72 11 chr10 65527200 65527380 -80061908 + Charlie1b DNA MER1_type 329 519 -4 1838 219 30 55 chr10 65527489 65527767 -80061521 - LTR40b LTR ERVL 0 462 198 2274 64 7 0 chr10 65527767 65528079 -80061209 - AluY SINE Alu 0 314 1 1838 219 30 55 chr10 65528079 65528273 -80061015 - LTR40b LTR ERVL -264 198 1 301 260 108 64 chr10 65528825 65529029 -80060259 + MLT1J LTR MaLR 297 509 -2 596 271 110 69 chr10 65529862 65529926 -80059362 - LTR33 LTR ERVL 0 521 461 1829 146 29 4 chr10 65529926 65530228 -80059060 + AluJb SINE Alu 1 309 0 596 271 110 69 chr10 65530228 65530642 -80058646 - LTR33 LTR ERVL -60 461 22 662 75 0 0 chr10 65531504 65531584 -80057704 + MADE1 DNA Mariner 1 80 0 2230 91 0 53 chr10 65531596 65531916 -80057372 + AluSc SINE Alu 1 303 -6 23 0 0 0 chr10 65531922 65531945 -80057343 + AT_rich Low_complexity Low_complexity 1 23 0 335 317 39 0 chr10 65532015 65532119 -80057169 - MIR SINE MIR -37 225 118 21 0 0 0 chr10 65532289 65532310 -80056978 + AT_rich Low_complexity Low_complexity 1 21 0 2018 130 17 3 chr10 65533305 65533597 -80055691 - AluSx SINE Alu -16 296 1 256 311 42 50 chr10 65534614 65534733 -80054555 - L2 LINE L2 0 3272 3155 405 277 179 67 chr10 65534984 65535341 -80053947 - L2 LINE L2 -1 3312 2916 2463 78 0 0 chr10 65535905 65536199 -80053089 - AluSx SINE Alu -18 294 1 670 198 190 68 chr10 65536653 65536678 -80052610 - L1MC5 LINE L1 -32 7929 7908 2319 61 4 0 chr10 65536678 65536957 -80052331 + AluY SINE Alu 19 298 -13 670 198 190 68 chr10 65536957 65537326 -80051962 - L1MC5 LINE L1 -53 7908 7487 392 263 20 10 chr10 65537341 65537440 -80051848 + MER81 DNA DNA 7 106 -8 922 224 86 50 chr10 65537470 65537831 -80051457 - L1MC5 LINE L1 -516 7445 7072 723 286 104 23 chr10 65537834 65538180 -80051108 - L2 LINE L2 -568 2746 2373 222 250 39 0 chr10 65538620 65538672 -80050616 - MER91C DNA MER1_type -24 116 63 267 323 72 25 chr10 65539297 65539459 -80049829 - MIR SINE MIR -62 146 29 2557 121 11 11 chr10 65539687 65540066 -80049222 + L1PB2 LINE L1 5772 6150 -1 267 255 89 38 chr10 65540262 65540419 -80048869 - L1ME4a LINE L1 -201 5920 5756 512 328 49 35 chr10 65540527 65540893 -80048395 + L2 LINE L2 2492 2862 -452 2037 125 3 3 chr10 65541249 65541566 -80047722 - AluSg SINE Alu 0 310 1 195 355 40 0 chr10 65541578 65541654 -80047634 + L2 LINE L2 3230 3308 -5 1005 276 90 61 chr10 65541846 65542404 -80046884 + MLT1K LTR MaLR 5 578 -10 348 83 0 0 chr10 65542591 65542639 -80046649 + (CA)n Simple_repeat Simple_repeat 2 49 0 291 296 17 26 chr10 65543143 65543258 -80046030 - L2 LINE L2 -3 3310 3197 321 273 0 0 chr10 65543279 65543345 -80045943 - L2 LINE L2 -46 3226 3161 320 239 52 37 chr10 65543361 65543495 -80045793 - Charlie7 DNA MER1_type -6 2606 2471 195 262 115 33 chr10 65545603 65545664 -80043624 - MIR3 SINE MIR -53 155 90 685 221 147 6 chr10 65545775 65545938 -80043350 - MER5A DNA MER1_type 0 189 4 244 312 13 0 chr10 65545940 65546017 -80043271 + MIR SINE MIR 1 78 -184 364 282 42 74 chr10 65546051 65546223 -80043065 - Charlie8 DNA MER1_type -1009 1408 135 2243 87 13 29 chr10 65546294 65546604 -80042684 - AluSx SINE Alu -7 305 1 2090 131 3 0 chr10 65546667 65546964 -80042324 + AluSx SINE Alu 1 298 -14 346 352 34 11 chr10 65547013 65547189 -80042099 - MIR SINE MIR -55 207 28 471 265 121 60 chr10 65547621 65547836 -80041452 + MIR SINE MIR 29 256 -6 6704 124 133 112 chr10 65547966 65549629 -80039659 + pTR5 LTR ERV1 741 2438 0 224 255 0 0 chr10 65549713 65549760 -80039528 - MIR SINE MIR -131 131 85 231 180 40 20 chr10 65549810 65549860 -80039428 + MIR SINE MIR 97 147 -61 262 222 0 122 chr10 65551280 65551370 -80037918 - L2 LINE L2 -23 3290 3212 2076 114 0 33 chr10 65551448 65551754 -80037534 - AluSx SINE Alu -16 296 1 432 214 18 0 chr10 65551771 65551883 -80037405 + MER113 DNA MER1_type? 1 114 -407 1884 153 117 9 chr10 65552531 65552857 -80036431 - MLT1A1 LTR MaLR -3 362 2 380 341 7 0 chr10 65552935 65553073 -80036215 + MIR SINE MIR 12 150 -112 22 35 0 0 chr10 65553268 65553297 -80035991 + AT_rich Low_complexity Low_complexity 1 29 0 468 267 23 41 chr10 65553432 65553604 -80035684 + MIR SINE MIR 2 170 -92 208 286 0 18 chr10 65555010 65555066 -80034222 - MIR3 SINE MIR -5 203 149 1152 224 78 51 chr10 65555488 65555922 -80033366 + MLT1J1 LTR MaLR 1 446 0 285 225 138 12 chr10 65556280 65556360 -80032928 + MIR SINE MIR 88 177 -85 204 40 0 0 chr10 65557035 65557060 -80032228 + (CAGGA)n Simple_repeat Simple_repeat 1 25 0 288 250 36 80 chr10 65557179 65557291 -80031997 + MIR SINE MIR 85 191 -71 673 300 11 38 chr10 65557853 65558116 -80031172 - MIR SINE MIR 0 262 7 465 229 15 61 chr10 65559320 65559451 -80029837 + L2 LINE L2 3188 3312 -1 275 282 13 13 chr10 65559886 65559964 -80029324 + MIR3 SINE MIR 82 159 -49 370 251 112 70 chr10 65560097 65560153 -80029135 + MER102a DNA MER1_type 82 134 -1283 2148 119 0 3 chr10 65560153 65560482 -80028806 - AluSx SINE Alu 0 312 1 370 251 112 70 chr10 65560482 65560640 -80028648 + MER102a DNA MER1_type 134 305 -25 273 275 64 18 chr10 65561286 65561395 -80027893 - MIR SINE MIR -34 228 115 2028 143 0 0 chr10 65561802 65562088 -80027200 + AluSx SINE Alu 1 286 -26 835 192 7 0 chr10 65562117 65562268 -80027020 + FRAM SINE Alu 1 150 -26 24 0 0 0 chr10 65562268 65562292 -80026996 + AT_rich Low_complexity Low_complexity 1 24 0 26 0 0 0 chr10 65562772 65562798 -80026490 + AT_rich Low_complexity Low_complexity 1 26 0 327 309 0 0 chr10 65563307 65563401 -80025887 - MER117 DNA MER1_type -3 194 101 442 286 94 25 chr10 65564206 65564451 -80024837 + L1ME LINE L1 5515 5776 -345 1467 164 62 15 chr10 65564524 65564798 -80024490 - AluJo SINE Alu -25 287 1 26 0 0 0 chr10 65564952 65564978 -80024310 + AT_rich Low_complexity Low_complexity 1 26 0 338 0 0 23 chr10 65565217 65565260 -80024028 + (TTTTC)n Simple_repeat Simple_repeat 4 45 0 601 221 18 0 chr10 65565265 65565378 -80023910 - FLAM_A SINE Alu -18 115 1 202 272 105 61 chr10 65565969 65566083 -80023205 - MIR SINE MIR -46 216 98 558 249 79 12 chr10 65567470 65567635 -80021653 + MIR SINE MIR 85 260 -2 1760 192 0 0 chr10 65567743 65568051 -80021237 - AluJb SINE Alu -4 308 1 882 275 58 20 chr10 65568168 65568615 -80020673 - L1ME4a LINE L1 -236 5885 5422 606 275 121 0 chr10 65568691 65568873 -80020415 + MIR SINE MIR 18 221 -41 287 207 69 0 chr10 65569440 65569498 -80019790 - MIR3 SINE MIR -24 184 123 251 116 47 0 chr10 65569820 65569863 -80019425 + MIR SINE MIR 103 147 -61 2578 41 0 16 chr10 65569880 65570196 -80019092 - AluY SINE Alu 0 311 1 202 267 13 13 chr10 65570346 65570421 -80018867 - MIR SINE MIR -107 101 27 443 198 43 96 chr10 65570641 65570828 -80018460 - MER5B DNA MER1_type 0 178 2 258 196 34 101 chr10 65570880 65571089 -80018199 + Charlie7 DNA MER1_type 2410 2604 -8 189 271 0 51 chr10 65571213 65571272 -80018016 + L2 LINE L2 3179 3234 -79 373 206 232 19 chr10 65571312 65571467 -80017821 + MIR SINE MIR 63 250 -12 183 259 136 37 chr10 65571715 65571796 -80017492 - L2 LINE L2 -258 3014 2926 1790 174 57 48 chr10 65571801 65572296 -80016992 + Charlie1b DNA MER1_type 6 504 -19 1804 156 65 3 chr10 65573604 65573925 -80015363 - MER58B DNA MER1_type 0 341 1 249 225 14 0 chr10 65574021 65574092 -80015196 + (TA)n Simple_repeat Simple_repeat 1 72 0 1638 204 51 10 chr10 65574100 65574512 -80014776 + MER63C DNA MER1_type 56 484 -446 1807 185 81 71 chr10 65574513 65574543 -80014745 - MLT2B1 LTR ERVL -6 514 486 302 0 26 0 chr10 65574543 65574581 -80014707 + (TG)n Simple_repeat Simple_repeat 1 39 0 1807 185 81 71 chr10 65574581 65575059 -80014229 - MLT2B1 LTR ERVL -34 486 1 1137 135 31 0 chr10 65575059 65575251 -80014037 + MER63C DNA MER1_type 481 678 -252 1106 221 59 25 chr10 65575252 65575323 -80013965 - MER2 DNA MER2_type -1 344 277 1850 163 7 7 chr10 65575323 65575630 -80013658 + AluSx SINE Alu 1 307 -5 1106 221 59 25 chr10 65575630 65575880 -80013408 - MER2 DNA MER2_type -68 277 12 979 198 54 4 chr10 65575879 65576121 -80013167 + MER63C DNA MER1_type 678 931 0 * 1877 214 62 31 chr10 65581333 65581881 -80007407 + MER74B LTR ERVL 58 622 0 311 278 61 83 chr10 65581888 65581929 -80007359 + L2 LINE L2 3089 3129 -184 2148 147 3 15 chr10 65581929 65582270 -80007018 - MER1B DNA MER1_type 0 337 1 311 278 61 83 chr10 65582270 65582458 -80006830 + L2 LINE L2 3129 3313 0 313 272 216 0 chr10 65582650 65582775 -80006513 + MIR SINE MIR 111 262 0 241 307 165 11 chr10 65582929 65583105 -80006183 + L3 LINE CR1 1121 1323 -254 210 358 41 8 chr10 65583164 65583287 -80006001 + L2 LINE L2 3185 3311 -2 309 311 106 8 chr10 65583608 65583740 -80005548 - L3 LINE CR1 -17 1560 1416 818 293 44 16 chr10 65583740 65583989 -80005299 + MIR SINE MIR 4 259 -3 22 56 0 0 chr10 65585010 65585046 -80004242 + AT_rich Low_complexity Low_complexity 1 36 0 2069 141 13 0 chr10 65585048 65585354 -80003934 + AluSx SINE Alu 1 310 -2 331 372 141 22 chr10 65585423 65585700 -80003588 - L2 LINE L2 -9 3263 2954 227 118 0 0 chr10 65585846 65585880 -80003408 + Alu SINE Alu 1 34 -268 1540 136 5 0 chr10 65585881 65586102 -80003186 + AluSg/x SINE Alu 80 301 -9 2432 56 0 0 chr10 65587589 65587908 -80001380 + AluY SINE Alu 1 319 0 455 264 119 51 chr10 65588196 65588222 -80001066 - L1MC/D LINE L1 -1997 5811 5788 2453 79 3 0 chr10 65588222 65588525 -80000763 + AluSp SINE Alu 1 304 -9 455 264 119 51 chr10 65588525 65589010 -80000278 - L1MC/D LINE L1 -2020 5788 5265 2763 189 84 93 chr10 65589137 65590375 -79998913 + L1MC5 LINE L1 6690 7916 -45 374 212 85 17 chr10 65590478 65590596 -79998692 + L2 LINE L2 3188 3313 0 496 211 88 54 chr10 65590883 65591030 -79998258 - MER5B DNA MER1_type 0 178 27 309 348 59 8 chr10 65592706 65592824 -79996464 + MIR SINE MIR 17 140 -68 882 300 8 12 chr10 65593429 65593679 -79995609 + MIR SINE MIR 2 250 -12 218 308 13 13 chr10 65594108 65594186 -79995102 + MIR SINE MIR 78 155 -107 298 308 33 25 chr10 65594790 65594910 -79994378 - MIR SINE MIR -113 149 29 431 280 10 10 chr10 65595060 65595160 -79994128 - MIR SINE MIR -84 124 25 239 271 0 0 chr10 65595276 65595335 -79993953 - L2 LINE L2 -1 3312 3254 1441 266 33 5 chr10 65595376 65595804 -79993484 + LTR16C LTR ERVL 12 451 -40 975 188 180 12 chr10 65595811 65596066 -79993222 + AluJo SINE Alu 1 298 -14 213 258 103 10 chr10 65597678 65597775 -79991513 + MIR3 SINE MIR 84 189 -19 2130 122 20 0 chr10 65597775 65598070 -79991218 - AluSx SINE Alu -6 306 6 1781 158 0 48 chr10 65598264 65598580 -79990708 - AluJb SINE Alu -11 301 1 180 0 0 0 chr10 65599826 65599846 -79989442 + (T)n Simple_repeat Simple_repeat 1 20 0 386 196 186 0 chr10 65602352 65602449 -79986839 - L2 LINE L2 -4 3309 3195 254 222 214 8 chr10 65602580 65602697 -79986591 + MER103 DNA DNA 24 164 -2 21 0 0 0 chr10 65602697 65602718 -79986570 + AT_rich Low_complexity Low_complexity 1 21 0 350 271 62 21 chr10 65603114 65603210 -79986078 + MIR SINE MIR 24 123 -85 367 248 83 41 chr10 65603224 65603369 -79985919 - MIR SINE MIR -49 213 63 309 239 36 109 chr10 65603497 65603635 -79985653 - L2 LINE L2 -1 3271 3144 2450 139 75 5 chr10 65603714 65604154 -79985134 + L1MB5 LINE L1 5694 6164 -10 209 354 53 44 chr10 65604229 65604342 -79984946 - L2 LINE L2 -22 3250 3137 232 283 130 0 chr10 65604547 65604639 -79984649 - MIR SINE MIR -73 135 32 1740 203 88 9 chr10 65604652 65605071 -79984217 - MER82 DNA MER2_type -6 647 196 357 190 58 35 chr10 65605084 65605258 -79984030 + (TTATA)n Simple_repeat Simple_repeat 2 179 0 353 177 19 67 chr10 65605223 65605513 -79983775 + (TATAA)n Simple_repeat Simple_repeat 1 275 0 * 960 211 10 20 chr10 65605521 65605725 -79983563 - MER82 DNA MER2_type -450 203 2 360 0 0 0 chr10 65605809 65605849 -79983439 + (CA)n Simple_repeat Simple_repeat 2 41 0 541 235 158 0 chr10 65605856 65606008 -79983280 - MER45A DNA AcHobo 0 178 3 2318 164 61 39 chr10 65606925 65607382 -79981906 - MLT1C LTR MaLR 0 467 1 1182 242 0 0 chr10 65607971 65608190 -79981098 - MER58A DNA MER1_type -4 220 2 2413 95 3 0 chr10 65608271 65608577 -79980711 - AluSg SINE Alu -3 307 1 211 276 138 17 chr10 65608653 65608769 -79980519 - MIR SINE MIR -5 257 128 2044 139 17 0 chr10 65609570 65609865 -79979423 - AluSq SINE Alu -13 300 1 24 0 0 0 chr10 65609874 65609898 -79979390 + AT_rich Low_complexity Low_complexity 1 24 0 187 356 17 52 chr10 65610129 65610244 -79979044 + MIR3 SINE MIR 7 117 -91 338 286 7 82 chr10 65611266 65611413 -79977875 - L2 LINE L2 -1 3312 3177 229 337 40 10 chr10 65611426 65611527 -79977761 - L2 LINE L2 0 3272 3169 466 288 71 22 chr10 65611880 65612064 -79977224 - MER117 DNA MER1_type 0 197 5 32 81 0 0 chr10 65612260 65612334 -79976954 + AT_rich Low_complexity Low_complexity 1 74 0 417 304 193 6 chr10 65612353 65612534 -79976754 - MIR SINE MIR -17 245 31 481 308 84 4 chr10 65613152 65613389 -79975899 - MIR SINE MIR 0 262 7 601 172 15 143 chr10 65613430 65613480 -79975808 + MER69A DNA AcHobo 1 56 -2470 2110 118 7 7 chr10 65613480 65613777 -79975511 + AluSq SINE Alu 1 297 -16 601 172 15 143 chr10 65613777 65613929 -79975359 + MER69A DNA AcHobo 56 177 0 643 268 127 5 chr10 65614795 65615000 -79974288 - MIR SINE MIR -24 238 9 419 288 9 0 chr10 65614998 65615109 -79974179 + MIR3 SINE MIR 96 207 -1 * 342 289 37 53 chr10 65616194 65616381 -79972907 + L2 LINE L2 3112 3295 -18 190 317 79 20 chr10 65616912 65617013 -79972275 - MIR SINE MIR -4 258 152 635 289 55 9 chr10 65617326 65617544 -79971744 - LTR67 LTR ERVL -296 261 34 25 31 0 0 chr10 65617805 65617837 -79971451 + AT_rich Low_complexity Low_complexity 1 32 0 353 218 27 18 chr10 65617919 65618029 -79971259 - MER113 DNA MER1_type? -405 116 6 200 108 0 27 chr10 65618111 65618148 -79971140 + (TTTA)n Simple_repeat Simple_repeat 4 39 0 5914 105 4 1 chr10 65618156 65618985 -79970303 - L1PA13 LINE L1 -19 6144 5314 2968 6 0 0 chr10 65620003 65620321 -79968967 - AluYb8 SINE Alu 0 318 1 318 325 162 16 chr10 65620654 65620845 -79968443 - MIR SINE MIR -43 219 1 180 0 0 0 chr10 65622387 65622407 -79966881 + (T)n Simple_repeat Simple_repeat 1 20 0 1767 191 127 26 chr10 65622502 65622926 -79966362 + MLT1C LTR MaLR 1 467 0 794 172 0 0 chr10 65622975 65623091 -79966197 + FLAM_A SINE Alu 8 123 -19 3636 287 102 26 chr10 65623165 65624551 -79964737 + L2 LINE L2 893 2430 -884 1870 179 3 0 chr10 65624551 65624859 -79964429 - AluJo SINE Alu -3 309 1 3636 287 102 26 chr10 65624859 65625147 -79964141 + L2 LINE L2 2430 2695 -619 2784 162 14 53 chr10 65625169 65625230 -79964058 - L1MB8 LINE L1 -11 6167 6105 2341 101 3 0 chr10 65625230 65625528 -79963760 - AluSp SINE Alu -14 299 1 2784 162 14 53 chr10 65625528 65625760 -79963528 - L1MB8 LINE L1 -73 6105 5904 2201 117 3 3 chr10 65625760 65626059 -79963229 + AluSq SINE Alu 1 299 -14 2784 162 14 53 chr10 65626059 65626326 -79962962 - L1MB8 LINE L1 -274 5904 5628 1248 151 23 9 chr10 65626328 65626547 -79962741 - THE1C LTR MaLR -152 223 2 650 261 20 0 chr10 65626685 65626838 -79962450 + MIR3 SINE MIR 51 206 -2 525 294 28 6 chr10 65627914 65628094 -79961194 + MER117 DNA MER1_type 14 197 0 378 199 65 10 chr10 65628095 65628192 -79961096 - MIR SINE MIR -81 127 42 951 267 174 6 chr10 65628689 65629011 -79960277 + LTR16A LTR ERVL 52 427 -23 1219 271 55 11 chr10 65629035 65629396 -79959892 + HERV16 LTR ERVL 914 1290 -3706 2142 146 22 4 chr10 65629467 65629823 -79959465 - MLT2B1 LTR ERVL 0 414 1 9074 174 70 28 chr10 65629823 65632050 -79957238 - ERVL-B1 LTR ERVL -7 5757 3387 2360 316 62 44 chr10 65632024 65633666 -79955622 + HERV16 LTR ERVL 2328 3999 -1486 * 332 314 163 13 chr10 65633784 65634023 -79955265 + L2 LINE L2 3034 3308 -5 228 301 204 0 chr10 65634018 65634111 -79955177 - MIR SINE MIR -130 132 21 * 664 229 43 38 chr10 65634080 65634290 -79954998 + MIR SINE MIR 51 261 -1 21 57 0 0 chr10 65635732 65635767 -79953521 + AT_rich Low_complexity Low_complexity 1 35 0 208 189 0 0 chr10 65636011 65636048 -79953240 - L2 LINE L2 -16 3297 3261 419 257 0 88 chr10 65636102 65636129 -79953159 - L2 LINE L2 0 3313 3285 225 0 0 0 chr10 65636129 65636154 -79953134 + (CA)n Simple_repeat Simple_repeat 2 26 0 419 257 0 88 chr10 65636154 65636297 -79952991 - L2 LINE L2 -28 3285 3158 371 327 119 0 chr10 65636502 65636661 -79952627 - MIR SINE MIR -1 261 84 351 244 83 45 chr10 65637041 65637197 -79952091 - L1ME4a LINE L1 -3 6118 5957 664 294 80 13 chr10 65637206 65637450 -79951838 - MIR SINE MIR -4 258 19 261 0 0 0 chr10 65637469 65637498 -79951790 + (TCTA)n Simple_repeat Simple_repeat 2 30 0 1957 141 10 7 chr10 65637536 65637842 -79951446 - AluJb SINE Alu -5 307 1 286 236 47 39 chr10 65637842 65637969 -79951319 - L1ME4a LINE L1 -209 5912 5785 1056 169 17 0 chr10 65638025 65638202 -79951086 + AluJo SINE Alu 1 180 -132 661 86 0 76 chr10 65639628 65639733 -79949555 + AluSg/x SINE Alu 207 303 -7 364 282 42 74 chr10 65639804 65639976 -79949312 + Charlie8 DNA MER1_type 135 1408 -1009 244 312 13 0 chr10 65640010 65640087 -79949201 - MIR SINE MIR -184 78 1 685 221 147 6 chr10 65640089 65640252 -79949036 + MER5A DNA MER1_type 4 189 0 195 262 115 33 chr10 65640363 65640424 -79948864 + MIR3 SINE MIR 90 155 -53 320 239 52 37 chr10 65642532 65642666 -79946622 + Charlie7 DNA MER1_type 2471 2606 -6 321 273 0 0 chr10 65642682 65642748 -79946540 + L2 LINE L2 3161 3226 -46 291 296 17 26 chr10 65642769 65642884 -79946404 + L2 LINE L2 3197 3310 -3 420 71 0 0 chr10 65643388 65643444 -79945844 + (TG)n Simple_repeat Simple_repeat 2 57 0 1005 276 90 61 chr10 65643632 65644190 -79945098 - MLT1K LTR MaLR -10 578 5 195 355 40 0 chr10 65644382 65644458 -79944830 - L2 LINE L2 -5 3308 3230 2034 125 3 3 chr10 65644470 65644787 -79944501 + AluSg SINE Alu 1 310 0 512 328 49 35 chr10 65645143 65645509 -79943779 - L2 LINE L2 -452 2862 2492 278 253 75 70 chr10 65645588 65645774 -79943514 + L1ME4a LINE L1 5734 5920 -201 2557 121 11 11 chr10 65645970 65646349 -79942939 - L1PB2 LINE L1 -1 6150 5772 281 315 72 25 chr10 65646577 65646739 -79942549 + MIR SINE MIR 29 146 -62 222 250 39 0 chr10 65647366 65647418 -79941870 - MER91C DNA MER1_type -62 78 25 723 286 104 23 chr10 65647858 65648204 -79941084 + L2 LINE L2 2373 2746 -568 922 224 86 50 chr10 65648207 65648568 -79940720 + L1MC5 LINE L1 7072 7445 -516 411 222 30 20 chr10 65648598 65648697 -79940591 - MER81 DNA DNA -8 106 7 678 194 208 58 chr10 65648712 65649073 -79940215 + L1MC5 LINE L1 7487 7901 -60 2405 51 10 3 chr10 65649081 65649377 -79939911 - AluY SINE Alu -13 298 1 307 326 163 16 chr10 65649712 65649902 -79939386 - MIR SINE MIR -44 218 1 21 0 0 0 chr10 65651444 65651465 -79937823 + AT_rich Low_complexity Low_complexity 1 21 0 1767 191 127 26 chr10 65651558 65651982 -79937306 + MLT1C LTR MaLR 1 467 0 794 172 0 0 chr10 65652031 65652147 -79937141 + FLAM_A SINE Alu 8 123 -19 3702 281 104 28 chr10 65652221 65653607 -79935681 + L2 LINE L2 893 2430 -884 1884 175 3 0 chr10 65653607 65653915 -79935373 - AluJo SINE Alu -3 309 1 3702 281 104 28 chr10 65653915 65654203 -79935085 + L2 LINE L2 2430 2695 -619 2761 164 14 53 chr10 65654225 65654286 -79935002 - L1MB8 LINE L1 -11 6167 6105 2237 98 14 0 chr10 65654286 65654581 -79934707 - AluSp SINE Alu -14 299 1 2761 164 14 53 chr10 65654581 65654813 -79934475 - L1MB8 LINE L1 -73 6105 5904 2216 111 0 7 chr10 65654813 65655111 -79934177 + AluSx SINE Alu 1 296 -16 2761 164 14 53 chr10 65655111 65655378 -79933910 - L1MB8 LINE L1 -274 5904 5628 1248 151 23 9 chr10 65655380 65655599 -79933689 - THE1C LTR MaLR -152 223 2 648 248 26 7 chr10 65655737 65655890 -79933398 + MIR3 SINE MIR 51 206 -2 479 271 19 7 chr10 65656966 65657146 -79932142 + MER117 DNA MER1_type 14 197 0 371 226 96 20 chr10 65657147 65657282 -79932006 - MIR SINE MIR -62 146 2 848 270 174 6 chr10 65657741 65658063 -79931225 + LTR16A LTR ERVL 52 427 -23 1046 277 55 11 chr10 65658087 65658448 -79930840 + HERVL LTR ERVL 914 1290 -3706 1992 144 22 4 chr10 65658519 65658875 -79930413 - MLT2B1 LTR ERVL 0 414 1 8226 181 69 28 chr10 65658875 65661099 -79928189 - ERVL-B1 LTR ERVL -7 5757 3393 1839 319 45 31 chr10 65661093 65662725 -79926563 + HERVL LTR ERVL 2345 4005 -1649 * 348 305 172 21 chr10 65662797 65663076 -79926212 + L2 LINE L2 2988 3308 -5 232 290 204 0 chr10 65663071 65663164 -79926124 - MIR SINE MIR -130 132 21 * 673 229 43 38 chr10 65663133 65663343 -79925945 + MIR SINE MIR 51 261 -1 21 57 0 0 chr10 65664785 65664820 -79924468 + AT_rich Low_complexity Low_complexity 1 35 0 209 189 0 0 chr10 65665064 65665101 -79924187 - L2 LINE L2 -16 3297 3261 405 256 0 93 chr10 65665155 65665182 -79924106 - L2 LINE L2 0 3313 3285 225 0 0 0 chr10 65665182 65665207 -79924081 + (CA)n Simple_repeat Simple_repeat 2 26 0 405 256 0 93 chr10 65665207 65665351 -79923937 - L2 LINE L2 -28 3285 3158 381 327 119 0 chr10 65665559 65665718 -79923570 - MIR SINE MIR -1 261 84 233 0 62 0 chr10 65665879 65665911 -79923377 + (TAAAA)n Simple_repeat Simple_repeat 1 34 0 228 86 0 0 chr10 65665929 65665964 -79923324 + (A)n Simple_repeat Simple_repeat 1 35 0 288 244 83 45 chr10 65666050 65666206 -79923082 - L1ME4a LINE L1 -3 6118 5957 674 299 80 13 chr10 65666215 65666459 -79922829 - MIR SINE MIR -4 258 19 240 35 0 0 chr10 65666478 65666507 -79922781 + (TCTA)n Simple_repeat Simple_repeat 2 30 0 1968 141 10 7 chr10 65666545 65666851 -79922437 - AluJb SINE Alu -5 307 1 240 236 47 39 chr10 65666851 65666978 -79922310 - L1ME4a LINE L1 -209 5912 5785 1133 163 16 0 chr10 65667034 65667218 -79922070 + AluJo SINE Alu 1 187 -125 320 230 0 0 chr10 65667238 65667312 -79921976 - L1ME4a LINE L1 -417 5704 5631 204 231 14 147 chr10 65667597 65667740 -79921548 - L2 LINE L2 -249 3023 2900 189 0 0 0 chr10 65668569 65668590 -79920698 + (TG)n Simple_repeat Simple_repeat 1 21 0 23 33 0 0 chr10 65668947 65668977 -79920311 + AT_rich Low_complexity Low_complexity 1 30 0 430 314 47 0 chr10 65669154 65669323 -79919965 + MIR SINE MIR 28 204 -58 * 598 280 97 34 chr10 65669314 65669700 -79919588 - L2 LINE L2 0 3313 2761 603 211 19 45 chr10 65669891 65670047 -79919241 - MIR SINE MIR -2 260 109 431 319 35 12 chr10 65670203 65670372 -79918916 + MIR SINE MIR 67 239 -23 2071 153 8 18 chr10 65670651 65671037 -79918251 - MLT1B LTR MaLR -6 384 3 195 200 0 0 chr10 65671349 65671384 -79917904 + MIR SINE MIR 118 152 -110 2321 106 3 3 chr10 65672656 65672958 -79916330 + AluSq SINE Alu 1 302 -11 187 227 0 0 chr10 65673321 65673365 -79915923 - MIR SINE MIR -56 206 163 522 337 10 15 chr10 65673477 65673673 -79915615 + L2 LINE L2 2890 3084 -188 270 234 208 0 chr10 65673778 65673855 -79915433 + L2 LINE L2 3178 3270 -2 782 290 67 35 chr10 65674149 65674552 -79914736 + MLT1K LTR MaLR 169 584 -4 1758 184 0 0 chr10 65677171 65677482 -79911806 - AluJb SINE Alu 0 311 1 221 0 35 0 chr10 65677946 65677975 -79911313 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 403 231 11 11 chr10 65680046 65680137 -79909151 + MIR SINE MIR 82 172 -90 519 238 9 0 chr10 65683301 65683406 -79905882 - L2 LINE L2 0 3313 3208 248 274 65 12 chr10 65684430 65684536 -79904752 - MIR SINE MIR -60 148 37 217 327 71 44 chr10 65686606 65686719 -79902569 - MER5A DNA MER1_type -3 186 71 354 333 42 68 chr10 65687227 65687627 -79901661 - L1M4 LINE L1 -743 5403 5014 23 68 0 0 chr10 65687648 65687692 -79901596 + AT_rich Low_complexity Low_complexity 1 44 0 402 300 88 54 chr10 65687761 65688001 -79901287 - MIR SINE MIR -1 261 14 351 265 66 40 chr10 65688033 65688184 -79901104 - L1M4 LINE L1 -1307 4839 4685 2067 132 0 14 chr10 65688463 65688759 -79900529 - AluSx SINE Alu -20 292 1 473 311 34 14 chr10 65688997 65689145 -79900143 - L2 LINE L2 -5 3267 3117 236 100 25 0 chr10 65690347 65690387 -79898901 + (TCTA)n Simple_repeat Simple_repeat 4 44 0 784 302 96 28 chr10 65690484 65690911 -79898377 + MLT1L LTR MaLR 19 474 -141 259 219 0 16 chr10 65690938 65691002 -79898286 + MLT1L LTR MaLR 549 611 -4 798 263 74 36 chr10 65691724 65692115 -79897173 - MLT1J1 LTR MaLR -21 425 20 560 324 79 67 chr10 65692164 65692803 -79896485 + L2 LINE L2 2626 3264 -8 191 310 116 101 chr10 65692834 65692963 -79896325 + MIR3 SINE MIR 50 180 -28 243 0 0 0 chr10 65693685 65693712 -79895576 + (TC)n Simple_repeat Simple_repeat 2 28 0 1838 146 7 20 chr10 65693712 65694006 -79895282 - AluJo SINE Alu -22 290 1 734 149 59 72 chr10 65694372 65695100 -79894188 - L1MC2 LINE L1 0 7764 6137 2413 62 7 3 chr10 65696428 65696767 -79892521 + AluY SINE Alu 3 342 0 483 287 166 36 chr10 65696825 65697133 -79892155 + L2 LINE L2 2920 3272 0 22 0 0 0 chr10 65697258 65697280 -79892008 + AT_rich Low_complexity Low_complexity 1 22 0 427 331 7 22 chr10 65697340 65697476 -79891812 + MIR SINE MIR 11 144 -118 * 446 276 25 68 chr10 65697475 65697613 -79891675 + MIR SINE MIR 38 170 -92 273 29 0 0 chr10 65697613 65697647 -79891641 + (TC)n Simple_repeat Simple_repeat 1 34 0 446 276 25 68 chr10 65697647 65697671 -79891617 + MIR SINE MIR 170 193 -69 743 292 134 11 chr10 65697752 65698207 -79891081 + L1MC4a LINE L1 5373 5883 -1925 322 316 123 18 chr10 65698539 65698710 -79890578 - MIR SINE MIR -73 189 1 291 289 156 46 chr10 65701635 65701808 -79887480 + MIR3 SINE MIR 11 202 -6 204 276 112 69 chr10 65703499 65703615 -79885673 + MIR SINE MIR 66 186 -76 1516 115 0 4 chr10 65705463 65705689 -79883599 - L1PA8 LINE L1 -9 6163 5939 21 0 0 0 chr10 65707397 65707418 -79881870 + AT_rich Low_complexity Low_complexity 1 21 0 395 316 17 17 chr10 65707473 65707590 -79881698 - MIR SINE MIR -62 146 30 354 23 0 0 chr10 65708512 65708555 -79880733 + (TG)n Simple_repeat Simple_repeat 2 44 0 25 51 0 0 chr10 65710547 65710586 -79878702 + AT_rich Low_complexity Low_complexity 1 39 0 322 287 102 64 chr10 65711970 65712127 -79877161 + MIR SINE MIR 49 211 -51 26 0 0 0 chr10 65713035 65713061 -79876227 + AT_rich Low_complexity Low_complexity 1 26 0 240 260 91 13 chr10 65714429 65714506 -79874782 + MIR3 SINE MIR 113 195 -13 258 394 32 0 chr10 65714682 65714837 -79874451 + L2 LINE L2 2360 2519 -795 207 0 0 0 chr10 65715003 65715026 -79874262 + (A)n Simple_repeat Simple_repeat 1 23 0 252 86 0 0 chr10 65715027 65715062 -79874226 + (CAAAG)n Simple_repeat Simple_repeat 4 38 0 2155 92 3 0 chr10 65715658 65715941 -79873347 - AluSx SINE Alu -24 288 5 438 321 33 58 chr10 65716277 65716517 -79872771 - MIR SINE MIR -12 250 17 182 315 0 0 chr10 65716567 65716621 -79872667 - MIR SINE MIR -113 149 96 26 50 0 0 chr10 65717157 65717197 -79872091 + AT_rich Low_complexity Low_complexity 1 40 0 335 295 54 8 chr10 65717673 65717802 -79871486 + MIR SINE MIR 117 251 -11 332 295 76 0 chr10 65717862 65717967 -79871321 + L2 LINE L2 3200 3312 -1 22 56 0 0 chr10 65720053 65720089 -79869199 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr10 65721373 65721394 -79867894 + AT_rich Low_complexity Low_complexity 1 21 0 295 316 18 35 chr10 65722588 65722702 -79866586 + MIR SINE MIR 33 144 -118 690 321 29 4 chr10 65723521 65723761 -79865527 - MIR SINE MIR -8 254 9 191 241 35 35 chr10 65723891 65723949 -79865339 - L2 LINE L2 -81 3232 3175 577 291 100 19 chr10 65724045 65724316 -79864972 + L2 LINE L2 2427 2719 -595 3070 197 40 83 chr10 65724318 65725065 -79864223 - MER69 DNA AcHobo -83 2443 1751 2243 110 10 3 chr10 65725065 65725375 -79863913 - AluSx SINE Alu 0 312 1 3070 197 40 83 chr10 65725375 65725664 -79863624 - MER69 DNA AcHobo -775 1751 1451 490 239 198 30 chr10 65725778 65725975 -79863313 - MER69 DNA AcHobo -1941 585 356 2083 89 32 0 chr10 65726288 65726570 -79862718 - AluY SINE Alu -20 291 1 688 230 41 5 chr10 65726988 65727184 -79862104 + MER105 DNA DNA 1 203 -1 520 278 11 50 chr10 65727779 65727959 -79861329 - MLT1J LTR MaLR -4 507 335 394 215 74 25 chr10 65728056 65728177 -79861111 + MER5B DNA MER1_type 4 130 -48 22 56 0 0 chr10 65728177 65728213 -79861075 + AT_rich Low_complexity Low_complexity 1 36 0 6095 74 2 5 chr10 65728275 65729081 -79860207 - L1PA14 LINE L1 -9 6152 5349 * 6438 176 13 3 chr10 65729078 65730349 -79858939 + L1P LINE L1 4139 5423 -738 189 314 0 0 chr10 65730354 65730405 -79858883 + MER5B DNA MER1_type 126 176 -2 21 57 0 0 chr10 65734128 65734163 -79855125 + AT_rich Low_complexity Low_complexity 1 35 0 285 98 0 0 chr10 65734440 65734481 -79854807 + (TCCC)n Simple_repeat Simple_repeat 3 43 0 322 287 102 64 chr10 65737019 65737176 -79852112 + MIR SINE MIR 49 211 -51 26 0 0 0 chr10 65738084 65738110 -79851178 + AT_rich Low_complexity Low_complexity 1 26 0 240 260 91 13 chr10 65739478 65739555 -79849733 + MIR3 SINE MIR 113 195 -13 258 394 32 0 chr10 65739731 65739886 -79849402 + L2 LINE L2 2360 2519 -795 207 0 0 0 chr10 65740052 65740075 -79849213 + (A)n Simple_repeat Simple_repeat 1 23 0 252 86 0 0 chr10 65740076 65740111 -79849177 + (CAAAG)n Simple_repeat Simple_repeat 4 38 0 2155 92 3 0 chr10 65740707 65740990 -79848298 - AluSx SINE Alu -24 288 5 438 321 33 58 chr10 65741326 65741566 -79847722 - MIR SINE MIR -12 250 17 182 315 0 0 chr10 65741616 65741670 -79847618 - MIR SINE MIR -113 149 96 26 50 0 0 chr10 65742203 65742243 -79847045 + AT_rich Low_complexity Low_complexity 1 40 0 335 295 54 8 chr10 65742719 65742848 -79846440 + MIR SINE MIR 117 251 -11 332 295 76 0 chr10 65742908 65743013 -79846275 + L2 LINE L2 3200 3312 -1 22 56 0 0 chr10 65745099 65745135 -79844153 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr10 65746419 65746440 -79842848 + AT_rich Low_complexity Low_complexity 1 21 0 295 316 18 35 chr10 65747634 65747748 -79841540 + MIR SINE MIR 33 144 -118 690 321 29 4 chr10 65748567 65748807 -79840481 - MIR SINE MIR -8 254 9 191 241 35 35 chr10 65748938 65748996 -79840292 - L2 LINE L2 -81 3232 3175 577 291 100 19 chr10 65749092 65749363 -79839925 + L2 LINE L2 2427 2719 -595 2162 218 41 56 chr10 65749365 65750093 -79839195 - MER69 DNA AcHobo -83 2443 1727 24 0 0 29 chr10 65750093 65750112 -79839176 + AT_rich Low_complexity Low_complexity 1 20 -14 2150 107 13 7 chr10 65750112 65750422 -79838866 - AluSx SINE Alu 0 312 1 24 0 0 29 chr10 65750422 65750437 -79838851 + AT_rich Low_complexity Low_complexity 20 34 0 320 233 147 53 chr10 65750608 65750758 -79838530 - HAL1b LINE L1 -7 1341 1178 27 29 0 0 chr10 65750781 65750815 -79838473 + AT_rich Low_complexity Low_complexity 1 34 0 1812 147 6 29 chr10 65751181 65751494 -79837794 - AluSx SINE Alu -6 306 1 1946 129 7 3 chr10 65752647 65752934 -79836354 + AluSx SINE Alu 3 290 -22 668 95 60 0 chr10 65752934 65753102 -79836186 + (TA)n Simple_repeat Simple_repeat 1 178 0 329 100 44 56 chr10 65753104 65753194 -79836094 + (TTATA)n Simple_repeat Simple_repeat 5 93 0 362 138 84 12 chr10 65753194 65753361 -79835927 + (TA)n Simple_repeat Simple_repeat 2 180 0 263 224 0 30 chr10 65753487 65753554 -79835734 + GA-rich Low_complexity Low_complexity 1 65 0 253 239 28 0 chr10 65754196 65754267 -79835021 + L1MC3 LINE L1 7704 7776 -9 234 164 45 60 chr10 65754282 65754349 -79834939 + L1MC/D LINE L1 5783 5848 -1960 21 0 0 0 chr10 65754940 65754961 -79834327 + AT_rich Low_complexity Low_complexity 1 21 0 215 143 32 0 chr10 65755133 65755196 -79834092 + (TAGA)n Simple_repeat Simple_repeat 2 66 0 251 250 31 0 chr10 65755581 65755645 -79833643 + MLT1L LTR MaLR 119 184 -431 727 295 54 24 chr10 65756198 65756659 -79832629 + L1M4 LINE L1 4750 5224 -922 2062 53 0 0 chr10 65756678 65756941 -79832347 + L1PA4 LINE L1 5893 6155 0 1180 225 65 47 chr10 65757326 65757774 -79831514 + L1MC5 LINE L1 7121 7576 -385 896 190 115 40 chr10 65757863 65758089 -79831199 + MLT1D LTR MaLR 42 284 -221 21 89 0 0 chr10 65758139 65758195 -79831093 + AT_rich Low_complexity Low_complexity 1 56 0 583 305 85 26 chr10 65758863 65759240 -79830048 + L1MEd LINE L1 752 1150 -4969 475 269 68 64 chr10 65759334 65759598 -79829690 + L1MEd LINE L1 1234 1581 -909 1647 214 102 12 chr10 65759861 65760292 -79828996 + L1MA8 LINE L1 5690 6159 -132 * 3273 231 76 44 chr10 65760286 65761411 -79827877 + L1MC4 LINE L1 6730 7890 -152 229 239 30 0 chr10 65761410 65761477 -79827811 + L1MD2 LINE L1 6277 6345 -14 * 419 213 21 40 chr10 65761966 65762781 -79826507 + CT-rich Low_complexity Low_complexity 1 799 0 350 166 18 47 chr10 65762834 65763003 -79826285 + CT-rich Low_complexity Low_complexity 3 166 0 214 306 7 39 chr10 65763020 65763211 -79826077 + CT-rich Low_complexity Low_complexity 1 184 0 253 221 13 40 chr10 65763240 65763389 -79825899 + CT-rich Low_complexity Low_complexity 2 146 0 423 262 11 48 chr10 65763419 65763606 -79825682 + CT-rich Low_complexity Low_complexity 1 180 0 407 240 0 0 chr10 65763740 65763836 -79825452 + AluSg/x SINE Alu 202 297 -5 231 339 161 17 chr10 65763872 65763990 -79825298 + L2 LINE L2 3138 3272 0 546 200 122 70 chr10 65765728 65765958 -79823330 + L1MC4a LINE L1 6442 6683 -1125 987 110 44 44 chr10 65766073 65766255 -79823033 + L1M3 LINE L1 5341 5522 -646 302 368 172 5 chr10 65766407 65766611 -79822677 - L1MC/D LINE L1 -2188 5620 5383 21 0 0 0 chr10 65766739 65766760 -79822528 + AT_rich Low_complexity Low_complexity 1 21 0 5542 57 0 0 chr10 65766760 65767448 -79821840 - L1PA5 LINE L1 -2 6152 5465 1202 35 0 0 chr10 65767564 65767706 -79821582 - L1PA5 LINE L1 -9 6145 6004 227 319 81 3 chr10 65768258 65768543 -79820745 - L1MC/D LINE L1 -1537 4609 4303 326 231 96 48 chr10 65768681 65768785 -79820503 + MLT1B LTR MaLR 18 126 -248 180 176 0 0 chr10 65769096 65769130 -79820158 + (TATATG)n Simple_repeat Simple_repeat 5 38 0 244 156 42 135 chr10 65769130 65769226 -79820062 + L1ME4a LINE L1 5935 6021 -100 489 299 60 42 chr10 65769863 65770200 -79819088 + L3 LINE CR1 1044 1428 -149 235 333 57 0 chr10 65770186 65770291 -79818997 + L2 LINE L2 3158 3268 -4 * 185 309 59 44 chr10 65770280 65770416 -79818872 + L3 LINE CR1 1406 1543 -34 * 222 37 0 0 chr10 65771197 65771224 -79818064 + (TGGA)n Simple_repeat Simple_repeat 3 29 0 1649 187 0 26 chr10 65771667 65771977 -79817311 - AluJo SINE Alu -10 302 1 296 287 138 11 chr10 65772013 65772289 -79816999 + L1MC4a LINE L1 5290 5597 -569 480 317 42 56 chr10 65772483 65772789 -79816499 + L1MC4a LINE L1 5765 6066 -1742 268 250 135 10 chr10 65773489 65773585 -79815703 - MER91C DNA MER1_type -32 108 1 390 272 157 26 chr10 65775537 65775805 -79813483 + L1MC/D LINE L1 5320 5622 -2186 613 246 8 0 chr10 65775954 65776088 -79813200 + MLT1B LTR MaLR 256 390 0 428 282 121 47 chr10 65776089 65776568 -79812720 - L1MC/D LINE L1 -1975 4171 3656 23 54 0 0 chr10 65776941 65776978 -79812310 + AT_rich Low_complexity Low_complexity 1 37 0 306 317 89 26 chr10 65777095 65777398 -79811890 - L1MC/D LINE L1 -3150 2996 2675 422 287 94 50 chr10 65777628 65777809 -79811479 + LTR16A LTR ERVL 262 450 0 * 558 325 86 18 chr10 65777809 65778075 -79811213 + LTR33 LTR ERVL 76 360 -161 246 242 45 0 chr10 65778075 65778141 -79811147 - MLT1I LTR MaLR 0 409 341 327 259 95 9 chr10 65778215 65778331 -79810957 - MLT1I LTR MaLR -217 192 67 2551 62 0 0 chr10 65778357 65778666 -79810622 + AluY SINE Alu 1 309 -2 555 313 65 77 chr10 65778950 65779577 -79809711 - HAL1b LINE L1 -608 740 121 2179 109 6 13 chr10 65779627 65779938 -79809350 - AluSx SINE Alu 0 312 4 270 281 0 55 chr10 65780081 65780209 -79809079 + CT-rich Low_complexity Low_complexity 6 126 0 22 0 0 0 chr10 65781033 65781055 -79808233 + AT_rich Low_complexity Low_complexity 1 22 0 204 271 17 17 chr10 65782751 65782810 -79806478 + MIR SINE MIR 203 261 -1 684 292 10 14 chr10 65783352 65783561 -79805727 + MLT1H1 LTR MaLR 1 208 -347 24 32 0 0 chr10 65783664 65783695 -79805593 + AT_rich Low_complexity Low_complexity 1 31 0 30 45 0 0 chr10 65783763 65783807 -79805481 + AT_rich Low_complexity Low_complexity 1 44 0 27427 65 8 21 chr10 65783807 65787962 -79801326 + L1P2 LINE L1 1639 5731 -423 1872 247 77 25 chr10 65787953 65788958 -79800330 - L1MEc LINE L1 -3174 3041 2041 * 2026 101 0 40 chr10 65789461 65789759 -79799529 + AluSx SINE Alu 1 286 -26 1746 239 103 8 chr10 65789794 65790262 -79799026 + MLT1F1 LTR MaLR 56 567 0 343 214 83 12 chr10 65791284 65791368 -79797920 - MIR SINE MIR -18 244 155 850 268 190 16 chr10 65792134 65792571 -79796717 + LTR33 LTR ERVL 3 515 -6 199 346 15 0 chr10 65793427 65793515 -79795773 + MIR SINE MIR 66 154 -60 1830 216 8 8 chr10 65793944 65794301 -79794987 - MLT1A1 LTR MaLR -8 357 1 447 35 0 0 chr10 65795770 65795827 -79793461 + (TG)n Simple_repeat Simple_repeat 2 58 0 5784 45 0 0 chr10 65796420 65797144 -79792144 + L1PA7 LINE L1 5449 6172 0 908 141 98 0 chr10 65800450 65800613 -79788675 - L1PA11 LINE L1 0 6174 5996 21 0 0 0 chr10 65802104 65802125 -79787163 + AT_rich Low_complexity Low_complexity 1 21 0 1844 140 0 7 chr10 65802757 65803042 -79786246 + AluJb SINE Alu 1 283 -29 314 242 162 0 chr10 65803350 65803449 -79785839 - Charlie8 DNA MER1_type -2208 209 95 24 32 0 0 chr10 65804598 65804629 -79784659 + AT_rich Low_complexity Low_complexity 1 31 0 1767 181 0 7 chr10 65805039 65805343 -79783945 - AluJb SINE Alu -10 302 1 252 228 13 89 chr10 65805343 65805422 -79783866 + MIR SINE MIR 120 192 -70 2070 128 0 13 chr10 65805430 65805735 -79783553 + AluSx SINE Alu 1 301 -11 261 323 45 26 chr10 65808194 65808349 -79780939 + MLT1K LTR MaLR 368 525 -63 361 297 62 16 chr10 65808639 65808767 -79780521 - MIR SINE MIR -119 143 10 2269 110 3 3 chr10 65808825 65809133 -79780155 - AluSx SINE Alu -2 310 3 192 279 44 0 chr10 65809346 65809414 -79779874 + MIR3 SINE MIR 93 163 -45 5359 124 22 30 chr10 65809430 65810285 -79779003 - L1MA8 LINE L1 0 6291 5442 2606 43 0 0 chr10 65810285 65810589 -79778699 - AluY SINE Alu -7 304 1 5359 124 22 30 chr10 65810589 65810643 -79778645 - L1MA8 LINE L1 -849 5442 5389 184 360 27 36 chr10 65812457 65812568 -79776720 - L2 LINE L2 -1499 1815 1706 256 256 0 26 chr10 65812859 65812937 -79776351 - MIR SINE MIR -4 258 183 186 43 0 0 chr10 65813393 65813416 -79775872 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 302 188 12 59 chr10 65818216 65818301 -79770987 + L1MC5 LINE L1 7834 7914 -47 27 0 0 0 chr10 65818416 65818443 -79770845 + AT_rich Low_complexity Low_complexity 1 27 0 580 275 113 75 chr10 65818487 65819043 -79770245 - L1ME4a LINE L1 -255 5866 5290 1812 179 0 7 chr10 65819138 65819434 -79769854 + AluJo SINE Alu 4 297 -15 15620 153 18 16 chr10 65819609 65820584 -79768704 - L1MA3 LINE L1 0 7724 6753 2132 96 3 54 chr10 65820584 65820898 -79768390 - AluY SINE Alu -13 298 1 15620 153 18 16 chr10 65820898 65824364 -79764924 - L1MA3 LINE L1 -971 6753 3263 2359 87 10 0 chr10 65824595 65824905 -79764383 - AluSp SINE Alu 0 313 1 1222 149 37 67 chr10 65825020 65825288 -79764000 - Tigger7 DNA MER2_type 0 2491 2232 23 0 0 0 chr10 65825443 65825466 -79763822 + AT_rich Low_complexity Low_complexity 1 23 0 305 295 70 16 chr10 65826298 65826427 -79762861 + MIR SINE MIR 1 136 -126 365 248 142 35 chr10 65826793 65826906 -79762382 + L2 LINE L2 3189 3313 0 25 0 0 0 chr10 65828340 65828365 -79760923 + AT_rich Low_complexity Low_complexity 1 25 0 1938 154 3 17 chr10 65828548 65828846 -79760442 + AluSx SINE Alu 3 296 -16 474 282 40 45 chr10 65829417 65829619 -79759669 + MIR SINE MIR 3 203 -59 180 248 38 105 chr10 65829740 65829845 -79759443 - L3 LINE CR1 -9 1568 1471 1442 227 129 40 chr10 65831094 65831565 -79757723 - LTR33 LTR ERVL -3 518 6 230 247 12 37 chr10 65833549 65833630 -79755658 + L3b LINE CR1 1251 1329 -254 417 269 71 21 chr10 65834115 65834256 -79755032 - MIR SINE MIR 0 262 115 583 213 16 74 chr10 65834518 65834762 -79754526 - L1MC5 LINE L1 -132 7829 7600 26 30 0 0 chr10 65835361 65835394 -79753894 + GC_rich Low_complexity Low_complexity 1 33 0 223 368 161 7 chr10 65835725 65835880 -79753408 + MIR3 SINE MIR 20 198 -10 2759 7 0 0 chr10 65837739 65838036 -79751252 + AluY SINE Alu 1 297 -14 347 276 68 55 chr10 65838772 65838935 -79750353 - L1 LINE L1 -1100 5046 4882 456 149 42 23 chr10 65839019 65839406 -79749882 + (TA)n Simple_repeat Simple_repeat 1 394 0 21 36 0 0 chr10 65839706 65839734 -79749554 + AT_rich Low_complexity Low_complexity 1 28 0 496 323 69 34 chr10 65839815 65840497 -79748791 - L1 LINE L1 -1807 4339 3634 1145 181 34 21 chr10 65840891 65841128 -79748160 + MER96B DNA MER1_type? 7 246 -171 25 0 0 0 chr10 65841273 65841298 -79747990 + AT_rich Low_complexity Low_complexity 1 25 0 191 327 99 10 chr10 65842077 65842178 -79747110 - MIR SINE MIR -152 110 1 21 71 0 0 chr10 65842350 65842392 -79746896 + AT_rich Low_complexity Low_complexity 1 42 0 2231 96 3 0 chr10 65843180 65843473 -79745815 + AluY SINE Alu 1 294 -17 492 275 39 135 chr10 65843473 65843680 -79745608 + MER91A DNA MER1_type 3 189 -7 191 243 0 122 chr10 65844017 65844091 -79745197 + L2 LINE L2 3249 3313 0 189 233 112 52 chr10 65844411 65844527 -79744761 + L2 LINE L2 3183 3305 -8 27 29 0 0 chr10 65846217 65846251 -79743037 + AT_rich Low_complexity Low_complexity 1 34 0 370 284 66 64 chr10 65848154 65848531 -79740757 + HAL1b LINE L1 376 753 -595 290 279 125 50 chr10 65848820 65848915 -79740373 + L1MC/D LINE L1 5347 5434 -694 2230 80 0 14 chr10 65848915 65849230 -79740058 + AluY SINE Alu 1 311 0 290 279 125 50 chr10 65849230 65849430 -79739858 + L1MC/D LINE L1 5434 5656 -472 569 220 17 0 chr10 65850080 65850198 -79739090 - MER45A DNA AcHobo 0 178 59 2063 87 3 60 chr10 65851269 65851621 -79737667 - AluSx SINE Alu 0 335 1 264 197 0 33 chr10 65852329 65852390 -79736898 - MIR SINE MIR -167 95 37 234 0 0 0 chr10 65852649 65852675 -79736613 + (TA)n Simple_repeat Simple_repeat 1 26 0 2058 124 35 3 chr10 65852937 65853227 -79736061 + AluSq SINE Alu 1 299 -14 577 217 8 54 chr10 65853508 65853637 -79735651 - FLAM_A SINE Alu -10 123 1 383 365 25 0 chr10 65853754 65853992 -79735296 - Charlie8 DNA MER1_type -2143 274 31 297 0 0 0 chr10 65854370 65854403 -79734885 + (CA)n Simple_repeat Simple_repeat 2 34 0 252 267 46 69 chr10 65855743 65855874 -79733414 + MIR SINE MIR 47 174 -88 351 294 78 54 chr10 65855973 65856177 -79733111 - MIR SINE MIR -24 238 30 24 0 0 29 chr10 65856206 65856220 -79733068 + AT_rich Low_complexity Low_complexity 1 14 -20 2338 92 3 0 chr10 65856220 65856514 -79732774 - AluSp SINE Alu -18 295 1 24 0 0 29 chr10 65856514 65856534 -79732754 + AT_rich Low_complexity Low_complexity 14 34 0 725 253 69 33 chr10 65856726 65856951 -79732337 + L1ME1 LINE L1 5941 6332 -2 385 342 43 5 chr10 65856956 65857143 -79732145 + MIR SINE MIR 63 256 -6 * 646 301 140 33 chr10 65857124 65857934 -79731354 - L2 LINE L2 -7 3306 2407 194 173 0 19 chr10 65858160 65858212 -79731076 + (TG)n Simple_repeat Simple_repeat 2 52 0 436 261 45 9 chr10 65858919 65859030 -79730258 - MIR SINE MIR -142 120 6 587 59 0 12 chr10 65859633 65859718 -79729570 + (GA)n Simple_repeat Simple_repeat 1 84 0 252 0 0 0 chr10 65861479 65861507 -79727781 + (T)n Simple_repeat Simple_repeat 1 28 0 2008 118 34 3 chr10 65862927 65863223 -79726065 - AluSx SINE Alu -5 307 3 360 339 60 0 chr10 65863426 65863594 -79725694 + L3 LINE CR1 1103 1280 -297 820 212 40 87 chr10 65863601 65864037 -79725251 - MLT1A1 LTR MaLR 0 374 1 274 376 23 18 chr10 65864060 65864278 -79725010 + L3 LINE CR1 1317 1535 -42 245 318 74 34 chr10 65865660 65865808 -79723480 + MER5A DNA MER1_type 14 167 -22 239 211 19 0 chr10 65865920 65865972 -79723316 + A-rich Low_complexity Low_complexity 5 57 0 771 316 22 4 chr10 65866343 65866568 -79722720 - MIR SINE MIR -32 230 2 941 189 144 0 chr10 65866596 65866776 -79722512 - MER58A DNA MER1_type 0 224 19 1992 113 18 7 chr10 65868127 65868410 -79720878 + AluSx SINE Alu 1 286 -26 350 219 232 32 chr10 65868435 65868590 -79720698 - MIR SINE MIR -65 197 12 29 0 0 0 chr10 65868723 65868752 -79720536 + AT_rich Low_complexity Low_complexity 1 29 0 567 213 8 8 chr10 65869049 65869171 -79720117 - MIR SINE MIR 0 262 141 187 179 0 51 chr10 65870063 65870102 -79719186 + L2 LINE L2 3271 3307 -6 247 164 33 0 chr10 65871166 65871227 -79718061 + CT-rich Low_complexity Low_complexity 4 66 0 293 298 31 99 chr10 65872335 65872496 -79716792 + MIR SINE MIR 2 151 -111 329 283 136 28 chr10 65873353 65873530 -79715758 - MIR3 SINE MIR -5 203 8 2095 102 14 10 chr10 65873761 65874055 -79715233 - AluSq SINE Alu -18 295 1 2046 109 7 0 chr10 65874772 65875047 -79714241 + AluSc SINE Alu 1 277 -32 207 0 0 0 chr10 65875052 65875075 -79714213 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 567 297 40 50 chr10 65875236 65875458 -79713830 - MIR SINE MIR -27 235 16 263 321 27 27 chr10 65876711 65876898 -79712390 - L1MC5 LINE L1 -187 7774 7588 * 1663 208 44 20 chr10 65876887 65877296 -79711992 - L1MB8 LINE L1 -35 6143 5725 448 214 71 62 chr10 65877330 65877540 -79711748 - L1MC5 LINE L1 -49 7912 7701 7782 135 26 14 chr10 65877566 65879316 -79709972 + L1M1 LINE L1 2375 4148 -3417 668 51 0 0 chr10 65879316 65879395 -79709893 - THE1B LTR MaLR -282 82 4 2594 99 15 2 chr10 65879395 65879789 -79709499 + L1MA3 LINE L1 5907 6305 0 216 0 0 0 chr10 65880686 65880710 -79708578 + (GA)n Simple_repeat Simple_repeat 1 24 0 218 247 27 0 chr10 65882451 65882524 -79706764 + (TA)n Simple_repeat Simple_repeat 1 75 0 414 371 11 23 chr10 65882878 65883053 -79706235 + MIR3 SINE MIR 17 189 -19 391 253 30 10 chr10 65884196 65884295 -79704993 + MIR SINE MIR 45 145 -63 208 305 95 48 chr10 65884370 65884475 -79704813 - L2 LINE L2 -19 3294 3185 216 236 124 79 chr10 65884548 65884637 -79704651 - L2 LINE L2 -3 3310 3218 759 246 71 29 chr10 65884705 65884945 -79704343 + MIR SINE MIR 13 262 0 544 326 50 82 chr10 65885024 65885487 -79703801 + MLT1K LTR MaLR 139 586 -2 26 0 0 0 chr10 65886232 65886258 -79703030 + AT_rich Low_complexity Low_complexity 1 26 0 392 287 138 42 chr10 65887320 65887487 -79701801 - MIR SINE MIR -10 252 70 321 261 126 8 chr10 65887709 65887828 -79701460 - MIR3 SINE MIR -1 207 75 533 193 0 0 chr10 65889505 65889593 -79699695 - MLT1D LTR MaLR -416 89 2 239 313 60 30 chr10 65889710 65889844 -79699444 - MIR SINE MIR -113 149 12 668 258 134 23 chr10 65890810 65891027 -79698261 - MLT1J LTR MaLR -227 284 44 2447 140 143 150 chr10 65891566 65891985 -79697303 - L1MC3 LINE L1 -169 7616 7196 329 226 20 69 chr10 65891985 65892087 -79697201 - MLT1F1 LTR MaLR -436 131 35 2447 140 143 150 chr10 65892087 65892451 -79696837 - L1MC3 LINE L1 -589 7196 6738 306 194 0 0 chr10 65892490 65892552 -79696736 + (TA)n Simple_repeat Simple_repeat 1 62 0 21 36 0 0 chr10 65894685 65894713 -79694575 + AT_rich Low_complexity Low_complexity 1 28 0 5592 163 36 17 chr10 65896551 65896916 -79692372 - L1PB4 LINE L1 -4 6152 5795 224 22 89 0 chr10 65896916 65896961 -79692327 + (TA)n Simple_repeat Simple_repeat 2 50 0 5592 163 36 17 chr10 65896961 65898327 -79690961 - L1PB4 LINE L1 -361 5795 4388 315 0 0 0 chr10 65898327 65898362 -79690926 + (TG)n Simple_repeat Simple_repeat 2 36 0 5592 163 36 17 chr10 65898362 65898631 -79690657 - L1PB4 LINE L1 -1768 4388 4126 701 0 24 0 chr10 65899021 65899105 -79690183 + (CATATA)n Simple_repeat Simple_repeat 3 88 0 243 380 53 0 chr10 65899991 65900104 -79689184 + L2 LINE L2 3150 3268 -4 249 309 12 74 chr10 65900125 65900287 -79689001 + MIR3 SINE MIR 19 170 -38 426 318 60 34 chr10 65900381 65900614 -79688674 - MIR SINE MIR -16 246 8 315 233 9 17 chr10 65901297 65901413 -79687875 + CT-rich Low_complexity Low_complexity 1 115 0 1137 246 87 22 chr10 65903679 65904191 -79685097 - L1ME LINE L1 -4957 1089 592 1652 180 7 23 chr10 65904196 65904501 -79684787 - AluJb SINE Alu -12 300 1 695 320 74 37 chr10 65904503 65904906 -79684382 - L1ME LINE L1 -5600 470 53 271 308 80 24 chr10 65904924 65905561 -79683727 - L1M4 LINE L1 -1113 5033 4316 487 303 13 0 chr10 65905564 65905719 -79683569 - L1ME3 LINE L1 -2 6160 6004 799 237 86 12 chr10 65905725 65905982 -79683306 - L1ME3 LINE L1 -228 5934 5659 286 300 109 26 chr10 65906276 65906616 -79682672 - L1ME3 LINE L1 -2095 4051 3684 210 128 0 51 chr10 65906616 65906655 -79682633 + (TTTTC)n Simple_repeat Simple_repeat 5 41 0 1930 204 36 8 chr10 65906686 65907043 -79682245 - MLT2B3 LTR ERVL -118 436 70 368 283 0 0 chr10 65907138 65907244 -79682044 - L1ME3 LINE L1 -3084 3062 2957 421 86 0 0 chr10 65907264 65907322 -79681966 - MLT2B3 LTR ERVL -496 58 1 28 0 0 0 chr10 65907527 65907555 -79681733 + AT_rich Low_complexity Low_complexity 1 28 0 542 298 96 10 chr10 65907638 65908054 -79681234 - L1M4 LINE L1 -3000 3146 2695 307 344 92 18 chr10 65908228 65908501 -79680787 - L1M4 LINE L1 -3644 2502 2210 707 252 66 35 chr10 65908809 65909186 -79680102 - L1MC5 LINE L1 -66 7895 7507 604 260 128 51 chr10 65909342 65910100 -79679188 - L1MC5 LINE L1 -465 7496 6670 1243 199 29 126 chr10 65910137 65910589 -79678699 + MLT1-int LTR MaLR 959 1366 -5 1118 196 39 58 chr10 65910647 65911061 -79678227 - MLT2A2 LTR ERVL -3 450 151 376 62 0 0 chr10 65911077 65911125 -79678163 + MLT2A2 LTR ERVL 406 453 0 41988 75 14 2 chr10 65911125 65913780 -79675508 + HERVL-A2 LTR ERVL 1 2623 -3031 1649 101 0 34 chr10 65913780 65914018 -79675270 + AluSq SINE Alu 67 296 -17 195 42 0 0 chr10 65914018 65914042 -79675246 + (TA)n Simple_repeat Simple_repeat 2 25 0 41988 75 14 2 chr10 65914042 65916794 -79672494 + HERVL-A2 LTR ERVL 2622 5472 -182 3484 214 82 36 chr10 65916896 65917206 -79672082 + L1MDa LINE L1 1285 1579 -4961 2238 93 0 17 chr10 65917206 65917506 -79671782 + AluSg SINE Alu 1 295 -15 3484 214 82 36 chr10 65917506 65918339 -79670949 + L1MDa LINE L1 1579 2481 -4059 28 61 0 0 chr10 65918343 65918392 -79670896 + AT_rich Low_complexity Low_complexity 1 49 0 26 64 0 0 chr10 65918716 65918763 -79670525 + AT_rich Low_complexity Low_complexity 1 47 0 543 284 87 60 chr10 65919202 65919671 -79669617 + L1 LINE L1 3692 4147 -1999 3017 112 5 2 chr10 65919671 65920098 -79669190 + MSTA LTR MaLR 1 428 0 543 284 87 60 chr10 65920098 65920914 -79668374 + L1 LINE L1 4147 5019 -1127 251 320 13 13 chr10 65921253 65921331 -79667957 - MLT1I LTR MaLR -125 284 207 2332 254 125 17 chr10 65921332 65922575 -79666713 - L1M4 LINE L1 -618 5556 4181 240 35 0 0 chr10 65922575 65922604 -79666684 + (TA)n Simple_repeat Simple_repeat 2 30 0 197 32 0 32 chr10 65922631 65922662 -79666626 + (TCTA)n Simple_repeat Simple_repeat 4 33 0 755 98 0 0 chr10 65922704 65922816 -79666472 + L1PA15 LINE L1 6049 6160 -5 626 250 114 19 chr10 65922929 65923193 -79666095 - L1M4 LINE L1 -1979 4167 3879 17629 208 21 18 chr10 65923214 65924981 -79664307 - L1PA15 LINE L1 -13 6803 5043 1510 113 185 8 chr10 65924981 65925246 -79664042 - AluSx SINE Alu 0 312 1 17629 208 21 18 chr10 65925246 65927298 -79661990 - L1PA15 LINE L1 -1773 5043 2999 2173 99 17 10 chr10 65927298 65927600 -79661688 + AluSq SINE Alu 1 304 -9 17629 208 21 18 chr10 65927600 65929620 -79659668 - L1PA15 LINE L1 -3817 2999 859 295 238 29 48 chr10 65929627 65929682 -79659606 - L1M4 LINE L1 -2263 3883 3828 1768 148 41 0 chr10 65929682 65929972 -79659316 + AluSc SINE Alu 1 301 0 295 238 29 48 chr10 65929972 65930020 -79659268 - L1M4 LINE L1 -2318 3828 3781 915 141 20 0 chr10 65930133 65930282 -79659006 - AluSg/x SINE Alu -5 305 154 504 291 0 0 chr10 65930283 65930458 -79658830 - L1M4 LINE L1 -2364 3782 3608 7134 16 0 0 chr10 65930478 65931295 -79657993 - L1PA2 LINE L1 -3 6152 5336 3375 28 0 0 chr10 65931293 65931693 -79657595 + L1P LINE L1 4809 5208 -938 * 1627 263 40 25 chr10 65931691 65932286 -79657002 - L1M4 LINE L1 -2536 3610 2999 * 1909 144 11 0 chr10 65932286 65932584 -79656704 + AluSx SINE Alu 4 304 0 1627 263 40 25 chr10 65932584 65932733 -79656555 - L1M4 LINE L1 -3147 2999 2854 700 207 35 0 chr10 65932851 65932996 -79656292 + MLT1D LTR MaLR 1 150 -355 818 260 74 12 chr10 65933017 65933340 -79655948 - L1MC/D LINE L1 -2211 5597 5255 378 356 54 10 chr10 65933562 65933857 -79655431 + L1MC4a LINE L1 6425 6732 -1076 2866 244 41 55 chr10 65933866 65934283 -79655005 - L1P LINE L1 -988 5158 4737 2013 117 11 0 chr10 65934283 65934565 -79654723 + AluSx SINE Alu 1 285 -27 2866 244 41 55 chr10 65934565 65934583 -79654705 - L1P LINE L1 -1409 4737 4720 411 21 0 0 chr10 65934583 65934631 -79654657 + (TAA)n Simple_repeat Simple_repeat 1 48 0 2866 244 41 55 chr10 65934631 65935285 -79654003 - L1P LINE L1 -1426 4720 4083 2706 139 71 2 chr10 65935286 65935767 -79653521 + L1PB4 LINE L1 5639 6152 -4 1316 186 4 4 chr10 65935841 65936072 -79653216 + AluJo SINE Alu 82 312 0 2447 90 12 0 chr10 65936177 65936521 -79652767 - L1PA10 LINE L1 -2 6166 5819 437 320 127 14 chr10 65936940 65937302 -79651986 + L1MC4 LINE L1 7093 7495 -547 1581 148 24 17 chr10 65937444 65937741 -79651547 + L1MD1 LINE L1 5944 6242 0 6652 129 29 0 chr10 65938576 65940565 -79648723 + L1MA3 LINE L1 4258 6305 0 1121 213 4 22 chr10 65940964 65941189 -79648099 - MER58A DNA MER1_type -2 222 2 3171 32 0 3 chr10 65941647 65942025 -79647263 - L1PA4 LINE L1 -7 6148 5772 844 62 7 2 chr10 65942025 65942145 -79647143 + L1PA4 LINE L1 5683 5785 -370 1146 95 0 12 chr10 65942374 65942543 -79646745 - L1PA8A LINE L1 -28 6103 5937 771 253 82 0 chr10 65942543 65942725 -79646563 + MIR SINE MIR 20 216 -46 2195 148 61 33 chr10 65942919 65943435 -79645853 - MLT2A2 LTR ERVL 0 554 1 435 259 190 10 chr10 65944169 65944374 -79644914 - MIR SINE MIR -1 261 20 445 243 42 30 chr10 65944682 65944945 -79644343 + L1ME LINE L1 3095 3360 -2786 * 2804 244 32 19 chr10 65944941 65946217 -79643071 + L1ME LINE L1 4387 5677 -487 22 0 0 0 chr10 65946806 65946828 -79642460 + AT_rich Low_complexity Low_complexity 1 22 0 364 273 85 30 chr10 65946925 65947090 -79642198 + L2 LINE L2 2551 2724 -590 494 375 74 3 chr10 65947091 65947443 -79641845 + L2 LINE L2 2930 3306 -7 238 310 110 39 chr10 65947604 65947759 -79641529 - L2 LINE L2 -210 3062 2897 1000 177 17 6 chr10 65947772 65947953 -79641335 + MER20 DNA MER1_type 37 219 0 201 121 0 0 chr10 65948092 65948125 -79641163 + (TTCCC)n Simple_repeat Simple_repeat 3 35 0 321 326 60 16 chr10 65948225 65948409 -79640879 - L2 LINE L2 -420 2894 2703 1154 146 67 105 chr10 65948420 65948589 -79640699 - MER33 DNA MER1_type -2261 324 171 2178 83 36 0 chr10 65948589 65948865 -79640423 + AluSq SINE Alu 2 287 -26 1154 146 67 105 chr10 65948865 65949010 -79640278 - MER33 DNA MER1_type -2414 171 22 449 307 22 48 chr10 65949013 65949241 -79640047 - L2 LINE L2 -614 2700 2479 528 200 92 0 chr10 65949491 65949611 -79639677 + L2 LINE L2 3183 3313 0 200 219 0 0 chr10 65949802 65949843 -79639445 + (TATATG)n Simple_repeat Simple_repeat 2 42 0 628 330 27 14 chr10 65950292 65950589 -79638699 + MER84-int LTR ERV1 1407 1707 -5415 4735 179 18 18 chr10 65950686 65951558 -79637730 - MER21B-int LTR ERV1 -3319 872 1 2440 186 38 37 chr10 65951579 65952379 -79636909 - MER21B LTR ERV1 -19 844 24 687 57 0 0 chr10 65952382 65952470 -79636818 + (TAGA)n Simple_repeat Simple_repeat 2 89 0 739 363 34 20 chr10 65952482 65953217 -79636071 + MER84-int LTR ERV1 3227 4659 -3097 1474 167 86 73 chr10 65953561 65954014 -79635274 - LTR36 LTR ERV1 0 611 73 760 156 0 0 chr10 65954118 65954240 -79635048 + FLAM_C SINE Alu 1 122 -11 570 251 0 0 chr10 65954244 65954423 -79634865 + GA-rich Low_complexity Low_complexity 1 179 0 762 335 32 44 chr10 65954435 65955245 -79634043 + MER84-int LTR ERV1 4675 7604 -516 215 31 31 0 chr10 65955818 65955850 -79633438 + (CAAAAA)n Simple_repeat Simple_repeat 3 35 0 275 315 0 0 chr10 65956830 65956922 -79632366 + MER84-int LTR ERV1 4321 4412 -542 566 206 8 3 chr10 65957509 65957632 -79631656 + MER72 LTR ERV1 255 482 -240 290 268 89 0 chr10 65957716 65957828 -79631460 + LTR26 LTR ERV1 458 579 -24 300 161 0 0 chr10 65957948 65958004 -79631284 - L1MA4 LINE L1 -679 5618 5563 2041 119 3 3 chr10 65958011 65958330 -79630958 + L1MA4 LINE L1 5616 5934 -366 827 118 0 66 chr10 65958330 65958502 -79630786 + L1MA4 LINE L1 6140 6305 0 794 257 75 39 chr10 65958790 65959248 -79630040 - L1PA8A LINE L1 -339 5792 5317 29 28 0 0 chr10 65959506 65959542 -79629746 + AT_rich Low_complexity Low_complexity 1 36 0 275 210 12 25 chr10 65960152 65960233 -79629055 - L1MC5 LINE L1 -50 7911 7832 276 203 57 104 chr10 65960376 65960568 -79628720 - L1MC5 LINE L1 -390 7571 7389 422 287 109 20 chr10 65960633 65960903 -79628385 - L1MC5 LINE L1 -1033 6775 6477 12683 122 4 1 chr10 65960903 65962841 -79626447 + L1P LINE L1 1930 3874 -2272 776 161 7 7 chr10 65962841 65962977 -79626311 + L1PA8A LINE L1 5995 6131 0 12683 122 4 1 chr10 65962977 65962992 -79626296 + L1P LINE L1 3874 3887 -2259 337 331 103 30 chr10 65962992 65963255 -79626033 - L1MC4a LINE L1 -1320 6488 6207 1665 254 42 52 chr10 65963518 65963971 -79625317 - L1MC4a LINE L1 -1920 5888 5441 2125 135 0 0 chr10 65963971 65964283 -79625005 - AluSx SINE Alu 0 312 1 1665 254 42 52 chr10 65964283 65964444 -79624844 - L1MC4a LINE L1 -2367 5441 5280 3912 215 26 20 chr10 65965003 65965045 -79624243 + L1MA9 LINE L1 4804 4844 -1468 2291 112 13 36 chr10 65965045 65965429 -79623859 - THE1C LTR MaLR 0 375 1 3912 215 26 20 chr10 65965429 65966363 -79622925 + L1MA9 LINE L1 4844 5771 -541 222 37 0 0 chr10 65966363 65966390 -79622898 + (TG)n Simple_repeat Simple_repeat 2 28 0 3912 215 26 20 chr10 65966390 65966833 -79622455 + L1MA9 LINE L1 5771 6238 -74 297 0 0 0 chr10 65966833 65966866 -79622422 + (TA)n Simple_repeat Simple_repeat 1 33 0 3912 215 26 20 chr10 65966866 65966904 -79622384 + L1MA9 LINE L1 6238 6274 -38 258 132 19 0 chr10 65966980 65967033 -79622255 - Tigger8 DNA MER2_type -355 311 258 474 304 204 14 chr10 65967275 65967627 -79621661 - L2 LINE L2 -543 2771 2353 313 302 61 65 chr10 65969011 65969256 -79620032 - MER112 DNA MER1_type -12 248 5 231 233 58 29 chr10 65969508 65969611 -79619677 + L1MC2 LINE L1 1294 1399 -5017 475 310 99 30 chr10 65969611 65970005 -79619283 + L1MC2 LINE L1 1263 1683 -4743 2135 158 3 15 chr10 65970281 65970622 -79618666 - MER1B DNA MER1_type 0 337 1 581 315 70 27 chr10 65970674 65971170 -79618118 + L1MC2 LINE L1 3695 4302 -2124 225 65 0 0 chr10 65971170 65971201 -79618087 + (TCTA)n Simple_repeat Simple_repeat 4 34 0 581 315 70 27 chr10 65971201 65971345 -79617943 + L1MC2 LINE L1 4302 4438 -1988 660 229 9 6 chr10 65971432 65971613 -79617675 + L1MC2 LINE L1 5083 5267 -1159 3359 168 22 37 chr10 65971614 65972368 -79616920 + L1MC2 LINE L1 5879 6621 -3 1900 241 58 93 chr10 65972749 65974090 -79615198 + L1MC5 LINE L1 6620 7913 -48 323 307 132 34 chr10 65974254 65974459 -79614829 + L1MC4a LINE L1 6111 6335 -1473 3073 79 40 7 chr10 65974534 65974964 -79614324 - MLT2A1 LTR ERVL 0 444 1 2028 57 18 0 chr10 65974966 65975247 -79614041 - HERVL-A1 LTR ERVL -2 5652 5367 310 296 70 76 chr10 65976048 65976392 -79612896 - L1ME LINE L1 -333 5788 5447 1138 202 12 8 chr10 65976496 65976749 -79612539 - L1MDb LINE L1 -5292 1251 998 1126 270 43 53 chr10 65977192 65977814 -79611474 - L1MDb LINE L1 -5911 629 14 678 240 17 34 chr10 65978371 65978546 -79610742 + MER5B DNA MER1_type 6 177 -1 2375 76 0 16 chr10 65978686 65978990 -79610298 + AluSc SINE Alu 1 299 -10 224 230 0 14 chr10 65980859 65980933 -79608355 + (TAG)n Simple_repeat Simple_repeat 1 73 0 196 338 100 25 chr10 65980974 65981134 -79608154 - MIR SINE MIR -55 207 36 206 296 0 0 chr10 65981933 65981987 -79607301 + (CACCAT)n Simple_repeat Simple_repeat 5 58 0 572 327 37 5 chr10 65982482 65982696 -79606592 - MIR SINE MIR -10 252 32 189 321 19 0 chr10 65982825 65982878 -79606410 - L2 LINE L2 -5 3267 3214 383 352 26 34 chr10 65983195 65983428 -79605860 + L3b LINE CR1 1102 1332 -251 402 254 78 115 chr10 65983742 65983986 -79605302 + MER102a DNA MER1_type 96 330 0 564 294 168 23 chr10 65984666 65984880 -79604408 + MIR SINE MIR 8 252 -10 671 200 17 6 chr10 65985135 65985310 -79603978 + GA-rich Low_complexity Low_complexity 4 180 0 969 117 11 17 chr10 65985327 65985404 -79603884 + (GAAA)n Simple_repeat Simple_repeat 1 254 0 969 117 11 17 chr10 65985404 65985583 -79603705 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 585 129 0 0 chr10 65985705 65985798 -79603490 + (GGAA)n Simple_repeat Simple_repeat 3 95 0 3531 221 52 17 chr10 65986206 65987182 -79602106 - Charlie1a DNA MER1_type 0 1455 446 443 327 88 5 chr10 65988936 65989141 -79600147 - MIR SINE MIR -7 255 34 668 272 31 0 chr10 65989226 65989417 -79599871 + MER20 DNA MER1_type 2 198 -21 2068 98 4 0 chr10 65991836 65992111 -79597177 + AluSx SINE Alu 1 276 -36 216 0 0 0 chr10 65992118 65992142 -79597146 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 338 179 106 46 chr10 65992572 65992723 -79596565 + L1ME4a LINE L1 5711 5870 -251 456 261 91 40 chr10 65992723 65992922 -79596366 - L2 LINE L2 -2 3311 3103 389 107 2 18 chr10 65994913 65994980 -79594308 - MLT1E2 LTR MaLR 0 626 484 418 119 0 0 chr10 65994980 65995039 -79594249 + AluS SINE Alu 233 291 -18 1925 253 47 24 chr10 65995044 65995577 -79593711 - MLT1E2 LTR MaLR -64 562 18 285 244 22 33 chr10 65995633 65995723 -79593565 - MIR SINE MIR -111 151 63 207 414 90 35 chr10 65995770 65996147 -79593141 - L2 LINE L2 -9 3263 2866 1148 274 47 45 chr10 65996427 65996876 -79592412 - MLT1K LTR MaLR -7 581 132 503 282 65 24 chr10 65996976 65997034 -79592254 - MER5A DNA MER1_type -4 185 131 2600 48 0 0 chr10 65997034 65997343 -79591945 + AluY SINE Alu 1 309 -2 503 282 65 24 chr10 65997343 65997454 -79591834 - MER5A DNA MER1_type -58 131 9 1161 208 141 62 chr10 65997652 65998070 -79591218 + Charlie1a DNA MER1_type 10 460 -995 2168 117 50 51 chr10 65998420 65999202 -79590086 + MER4D LTR ERV1 1 872 0 255 214 0 0 chr10 65999294 65999364 -79589924 + (CTA)n Simple_repeat Simple_repeat 1 70 0 428 353 137 18 chr10 65999508 66000062 -79589226 + L2 LINE L2 2469 3083 -189 205 333 0 32 chr10 66000144 66000207 -79589081 + L2 LINE L2 3137 3197 -75 1997 149 86 21 chr10 66000299 66000914 -79588374 - MER39 LTR ERV1 0 707 4 35 24 0 0 chr10 66000997 66001039 -79588249 + AT_rich Low_complexity Low_complexity 1 42 0 227 196 39 0 chr10 66001175 66001226 -79588062 - L1ME LINE L1 -679 5442 5390 238 266 147 0 chr10 66001236 66001345 -79587943 - L1ME LINE L1 -1140 5006 4882 791 256 68 18 chr10 66001638 66001857 -79587431 - LTR16A LTR ERVL -6 444 215 357 288 121 61 chr10 66001904 66002036 -79587252 - LTR16A1 LTR ERVL -303 147 8 204 274 88 39 chr10 66002444 66002546 -79586742 + L2 LINE L2 2297 2403 -911 200 397 0 0 chr10 66002676 66002754 -79586534 + L2 LINE L2 2595 2672 -642 253 308 44 33 chr10 66003175 66003266 -79586022 + L2 LINE L2 3132 3223 -49 1139 158 24 24 chr10 66003374 66003583 -79585705 - MER3 DNA MER1_type 0 209 1 566 294 44 68 chr10 66003647 66003943 -79585345 - LTR16C LTR ERVL -9 482 194 267 295 19 0 chr10 66004116 66004221 -79585067 - MLT1L LTR MaLR -39 576 470 503 356 60 0 chr10 66004358 66004591 -79584697 - MLT1L LTR MaLR -335 280 34 252 292 72 126 chr10 66004621 66005049 -79584239 + L3 LINE CR1 1068 1472 -105 307 346 54 27 chr10 66005110 66005295 -79583993 - MIR SINE MIR -71 191 2 438 127 0 0 chr10 66005430 66005501 -79583787 + (TTCC)n Simple_repeat Simple_repeat 3 73 0 1722 174 11 11 chr10 66005502 66005789 -79583499 - AluJo SINE Alu -24 288 2 844 246 74 0 chr10 66006692 66006895 -79582393 - MIR SINE MIR 0 262 45 30 89 0 0 chr10 66006906 66006985 -79582303 + AT_rich Low_complexity Low_complexity 1 79 0 22 0 0 0 chr10 66007169 66007191 -79582097 + AT_rich Low_complexity Low_complexity 1 22 0 204 324 0 0 chr10 66007699 66007773 -79581515 + A-rich Low_complexity Low_complexity 1 74 0 211 389 6 30 chr10 66008904 66009071 -79580217 - L2 LINE L2 -3072 242 80 967 161 12 0 chr10 66009271 66009433 -79579855 - AluJb SINE Alu -18 294 131 293 228 53 61 chr10 66009433 66009547 -79579741 + L2 LINE L2 2223 2335 -979 705 311 90 65 chr10 66009567 66009630 -79579658 - LTR33 LTR ERVL -5 516 456 1784 156 0 0 chr10 66009630 66009893 -79579395 + AluSx SINE Alu 1 263 -49 705 311 90 65 chr10 66009893 66010231 -79579057 - LTR33 LTR ERVL -65 456 105 302 336 141 46 chr10 66010377 66010639 -79578649 + L2 LINE L2 2384 2670 -644 1138 269 97 26 chr10 66010789 66011535 -79577753 - L2 LINE L2 -47 3266 2471 1365 241 33 46 chr10 66012521 66012977 -79576311 + L1MC/D LINE L1 5374 5823 -1985 311 49 0 0 chr10 66012994 66013035 -79576253 - MADE1 DNA Mariner -39 41 1 27 29 0 0 chr10 66013491 66013525 -79575763 + AT_rich Low_complexity Low_complexity 1 34 0 1843 118 75 0 chr10 66014284 66014563 -79574725 - AluSq SINE Alu -13 300 1 2257 96 3 16 chr10 66015257 66015571 -79573717 + AluSx SINE Alu 1 310 -2 35 0 0 0 chr10 66015912 66015947 -79573341 + AT_rich Low_complexity Low_complexity 1 35 0 213 39 0 0 chr10 66016557 66016583 -79572705 + (CA)n Simple_repeat Simple_repeat 2 27 0 243 229 16 33 chr10 66016783 66016844 -79572444 + 7SK RNA RNA 133 192 -1 238 365 154 0 chr10 66016921 66017025 -79572263 + L2 LINE L2 3143 3262 -10 1484 180 48 61 chr10 66017324 66017719 -79571569 - MLT1B LTR MaLR 0 467 1 1014 182 30 0 chr10 66017734 66017937 -79571351 + ERVL-B1 LTR ERVL 5549 5757 -7 883 204 73 10 chr10 66017937 66018190 -79571098 + MLT2B1 LTR ERVL 1 270 -144 323 95 0 0 chr10 66018331 66018373 -79570915 + MLT2B1 LTR ERVL 373 414 0 420 278 89 41 chr10 66018590 66018759 -79570529 + MIR SINE MIR 65 241 -21 746 192 27 7 chr10 66019007 66019153 -79570135 + FRAM SINE Alu 1 146 -30 23 0 0 0 chr10 66021284 66021307 -79567981 + AT_rich Low_complexity Low_complexity 1 23 0 258 136 0 0 chr10 66021754 66021798 -79567490 + (ATG)n Simple_repeat Simple_repeat 1 44 0 358 297 77 0 chr10 66021815 66021970 -79567318 - MIR SINE MIR -12 250 84 236 305 106 28 chr10 66021992 66022133 -79567155 - MIR SINE MIR 0 262 111 25 0 0 0 chr10 66022306 66022331 -79566957 + AT_rich Low_complexity Low_complexity 1 25 0 2084 88 3 46 chr10 66023499 66023806 -79565482 - AluY SINE Alu -17 294 1 233 206 0 32 chr10 66024921 66024984 -79564304 + (TAAA)n Simple_repeat Simple_repeat 4 64 0 298 194 129 0 chr10 66025567 66025629 -79563659 + MIR3 SINE MIR 98 167 -41 2208 196 59 10 chr10 66025857 66026366 -79562922 - L1MC3 LINE L1 0 7785 7252 180 309 27 73 chr10 66026367 66026477 -79562811 - MIR SINE MIR -41 221 117 524 275 90 0 chr10 66026910 66027088 -79562200 - MIR SINE MIR -6 256 63 262 222 16 32 chr10 66028233 66028296 -79560992 + MER90 LTR ERV1 527 588 -26 397 289 124 35 chr10 66028399 66028600 -79560688 - MIR SINE MIR 0 262 44 1098 210 65 60 chr10 66028944 66029330 -79559958 - MER113 DNA MER1_type? -101 420 33 767 184 142 21 chr10 66031537 66031709 -79557579 - MER90 LTR ERV1 -362 213 15 1888 149 33 0 chr10 66031709 66032010 -79557278 - AluSx SINE Alu 0 312 2 767 184 142 21 chr10 66032010 66032027 -79557261 - MER90 LTR ERV1 -560 15 1 261 0 0 0 chr10 66033253 66033282 -79556006 + (TG)n Simple_repeat Simple_repeat 2 30 0 24 0 0 0 chr10 66033629 66033653 -79555635 + AT_rich Low_complexity Low_complexity 1 24 0 908 123 12 18 chr10 66034203 66034327 -79554961 - Tigger1 DNA MER2_type -55 2363 2239 2460 68 3 3 chr10 66034327 66034636 -79554652 + AluSc SINE Alu 1 309 0 908 123 12 18 chr10 66034636 66034674 -79554614 - Tigger1 DNA MER2_type -179 2239 2202 409 223 83 8 chr10 66034680 66034801 -79554487 - Tigger1 DNA MER2_type -2269 149 20 586 237 51 120 chr10 66035538 66035888 -79553400 + L2 LINE L2 2983 3308 -5 371 291 65 18 chr10 66036100 66036331 -79552957 + MIR SINE MIR 20 262 0 186 118 0 0 chr10 66036390 66036424 -79552864 + (T)n Simple_repeat Simple_repeat 1 34 0 185 346 85 104 chr10 66036983 66037045 -79552243 - L2 LINE L2 -10 3262 3200 1250 207 69 36 chr10 66037045 66037378 -79551910 - MER2 DNA MER2_type 0 344 1 185 346 85 104 chr10 66037378 66037775 -79551513 - L2 LINE L2 -72 3200 2812 2120 133 0 0 chr10 66037948 66038248 -79551040 - AluSx SINE Alu -12 300 1 596 242 147 5 chr10 66038418 66038610 -79550678 - MIR SINE MIR -11 251 35 1989 146 3 3 chr10 66040393 66040702 -79548586 - AluSx SINE Alu -1 311 3 193 260 20 0 chr10 66040798 66040848 -79548440 - MIR SINE MIR 0 262 212 1135 232 129 6 chr10 66040888 66041228 -79548060 + MLT1B LTR MaLR 9 390 0 1866 153 3 0 chr10 66042727 66043014 -79546274 + AluSc SINE Alu 1 288 -21 435 305 28 40 chr10 66044173 66044393 -79544895 - MIR SINE MIR -37 225 10 23 0 0 0 chr10 66045536 66045559 -79543729 + AT_rich Low_complexity Low_complexity 1 23 0 216 67 0 0 chr10 66046083 66046113 -79543175 + (CA)n Simple_repeat Simple_repeat 2 31 0 2081 164 8 5 chr10 66046115 66046486 -79542802 + L1PA16 LINE L1 5795 6166 0 33 90 0 0 chr10 66047123 66047212 -79542076 + AT_rich Low_complexity Low_complexity 1 89 0 759 177 41 7 chr10 66047321 66047468 -79541820 - L1MC1 LINE L1 -13 6320 6169 900 251 3 41 chr10 66047473 66047764 -79541524 - L1M4 LINE L1 -1743 4403 4124 215 318 75 24 chr10 66047958 66048116 -79541172 + MIR SINE MIR 44 207 -55 248 284 11 57 chr10 66050760 66050848 -79538440 - L2 LINE L2 0 3272 3189 23 33 0 0 chr10 66050983 66051013 -79538275 + AT_rich Low_complexity Low_complexity 1 30 0 8408 239 50 34 chr10 66051774 66052856 -79536432 - L1ME1 LINE L1 -5 6972 5909 2321 136 5 16 chr10 66052856 66053224 -79536064 + THE1B LTR MaLR 1 364 0 8408 239 50 34 chr10 66053224 66054459 -79534829 - L1ME1 LINE L1 -1068 5909 4695 1128 214 60 21 chr10 66054459 66054744 -79534544 - AluJo SINE Alu -6 296 1 8408 239 50 34 chr10 66054744 66056359 -79532929 - L1ME1 LINE L1 -2282 4695 2977 2112 179 62 14 chr10 66056359 66056796 -79532492 - MLT1C LTR MaLR 0 467 10 519 232 54 60 chr10 66056807 66057095 -79532193 - L1ME1 LINE L1 -3982 2977 2690 679 284 13 58 chr10 66057164 66057562 -79531726 - L1ME1 LINE L1 -4436 2702 2323 356 123 18 0 chr10 66057725 66057782 -79531506 + Tigger2 DNA MER2_type 2 59 -2659 2678 139 9 27 chr10 66057791 66058238 -79531050 + Tigger2 DNA MER2_type 2280 2718 0 1490 239 80 78 chr10 66058245 66058999 -79530289 - L1ME1 LINE L1 -4757 2200 1343 1935 208 53 65 chr10 66059614 66060123 -79529165 + MER67D LTR ERV1 1 503 -11 428 266 54 54 chr10 66060134 66060356 -79528932 - L1ME1 LINE L1 -6610 249 28 359 325 62 6 chr10 66061448 66061608 -79527680 - MIR SINE MIR -10 252 84 354 312 4 87 chr10 66061615 66061846 -79527442 - MIR SINE MIR 0 262 51 851 347 78 32 chr10 66061967 66062491 -79526797 - L3 LINE CR1 0 1577 1030 571 332 60 9 chr10 66062515 66062732 -79526556 + MIR SINE MIR 1 228 -34 262 350 32 45 chr10 66062871 66063028 -79526260 - L3 LINE CR1 -561 1016 862 884 342 113 38 chr10 66063062 66063769 -79525519 - L3 LINE CR1 -817 760 1 357 283 98 0 chr10 66064041 66064133 -79525155 - L2 LINE L2 -3 3310 3210 324 314 63 46 chr10 66064980 66065155 -79524133 + MIR SINE MIR 53 230 -32 891 209 45 10 chr10 66065368 66065569 -79523719 - MER3 DNA MER1_type 0 209 2 213 319 11 21 chr10 66066932 66067026 -79522262 - MIR SINE MIR -103 159 67 231 288 0 0 chr10 66067121 66067190 -79522098 - FRAM/FAM SINE Alu -114 52 1 524 277 47 18 chr10 66071674 66071948 -79517340 + L1M4 LINE L1 4860 5141 -1005 225 274 123 43 chr10 66072031 66072447 -79516841 + L1MC4a LINE L1 4134 4582 -1564 324 321 160 29 chr10 66072489 66073044 -79516244 + L1MC4a LINE L1 4614 5241 -905 896 294 129 26 chr10 66073058 66073664 -79515624 + L1MC4a LINE L1 5260 5927 -1881 2506 65 0 3 chr10 66075133 66075442 -79513846 + AluY SINE Alu 1 308 -3 332 209 112 97 chr10 66075504 66075538 -79513750 + L1MEd LINE L1 1002 1034 -5171 306 0 0 0 chr10 66075538 66075572 -79513716 + (CA)n Simple_repeat Simple_repeat 2 35 0 332 209 112 97 chr10 66075572 66075671 -79513617 + L1MEd LINE L1 1034 1137 -5068 342 262 71 16 chr10 66075974 66076157 -79513131 + L1MEd LINE L1 1541 1733 -4663 756 196 6 34 chr10 66076496 66076675 -79512613 - Charlie5 DNA MER1_type -1011 1601 1428 246 146 73 127 chr10 66076737 66076847 -79512441 + Charlie5 DNA MER1_type 1602 1705 -907 2098 39 0 0 chr10 66076936 66077190 -79512098 - L1PA5 LINE L1 0 6154 5901 22 0 0 0 chr10 66077719 66077741 -79511547 + AT_rich Low_complexity Low_complexity 1 22 0 632 271 105 26 chr10 66078637 66078866 -79510422 + MIR SINE MIR 2 248 -14 1609 176 29 29 chr10 66079097 66079409 -79509879 + AluJo SINE Alu 1 312 0 615 231 91 28 chr10 66079427 66079622 -79509666 - MIR SINE MIR -13 249 40 297 344 90 8 chr10 66080029 66080151 -79509137 - MIR SINE MIR -70 192 61 235 354 47 31 chr10 66080204 66080396 -79508892 - MIR3 SINE MIR -10 198 4 11426 55 6 1 chr10 66081081 66082938 -79506350 - L1P2 LINE L1 -385 5769 3906 * 13900 104 35 8 chr10 66082933 66084965 -79504323 + L1P LINE L1 31 2117 -4029 1793 203 41 28 chr10 66084965 66085496 -79503792 + pTR5 LTR ERV1 750 1287 -1151 1739 271 17 43 chr10 66085496 66086027 -79503261 + L1PA15 LINE L1 135 651 -6136 385 75 0 0 chr10 66086027 66086080 -79503208 - MLT2A1 LTR ERVL 0 453 401 315 151 48 0 chr10 66086081 66086207 -79503081 + (TA)n Simple_repeat Simple_repeat 2 133 0 2895 106 20 2 chr10 66086207 66086605 -79502683 - MLT2A1 LTR ERVL -39 405 1 14657 209 18 15 chr10 66086617 66091041 -79498247 + L1PA15 LINE L1 2357 6791 -25 2741 130 95 0 chr10 66091041 66091525 -79497763 + Tigger3(Golem) DNA MER2_type 2498 3027 -2 25 31 0 0 chr10 66091691 66091723 -79497565 + AT_rich Low_complexity Low_complexity 1 32 0 279 159 275 0 chr10 66092752 66092821 -79496467 - MIR SINE MIR -3 259 172 1390 146 9 26 chr10 66093531 66093764 -79495524 - MER30 DNA MER1_type -1 229 1 913 93 8 0 chr10 66093887 66094016 -79495272 + L1PA10 LINE L1 6034 6163 -5 404 319 59 0 chr10 66094158 66094293 -79494995 + MIR SINE MIR 104 246 -16 264 336 39 0 chr10 66094313 66094417 -79494871 + MIR SINE MIR 133 240 -22 265 272 65 95 chr10 66094548 66094717 -79494571 - MIR SINE MIR -51 211 48 290 215 74 59 chr10 66096619 66096754 -79492534 + MIR SINE MIR 90 226 -36 285 308 167 8 chr10 66096860 66096980 -79492308 - MIR SINE MIR 0 262 124 412 308 71 50 chr10 66097047 66097245 -79492043 + MIR3 SINE MIR 1 202 -6 240 269 0 0 chr10 66097265 66097317 -79491971 + GA-rich Low_complexity Low_complexity 1 52 0 377 273 115 14 chr10 66097372 66097511 -79491777 - MIR SINE MIR -47 215 63 191 314 43 57 chr10 66097890 66098030 -79491258 + MIR SINE MIR 101 238 -24 181 313 78 0 chr10 66100539 66100603 -79488685 + MIR SINE MIR 194 262 0 * 281 322 79 23 chr10 66100602 66100779 -79488509 - MIR SINE MIR -56 206 20 2248 258 35 12 chr10 66100804 66101451 -79487837 + L1ME3A LINE L1 5467 6128 -42 1593 175 0 0 chr10 66101492 66101760 -79487528 - L1MC1 LINE L1 -17 6316 6049 582 360 16 8 chr10 66102631 66102881 -79486407 - MIR SINE MIR -10 252 1 3216 239 78 88 chr10 66103003 66104093 -79485195 - L1MC4 LINE L1 0 7807 6707 374 314 166 0 chr10 66104777 66104952 -79484336 - MIR SINE MIR -10 252 49 284 296 24 32 chr10 66105255 66105380 -79483908 + L1ME3A LINE L1 466 589 -5941 346 273 56 21 chr10 66105480 66105623 -79483665 + L1MA9 LINE L1 -218 4294967225 -6377 13091 178 44 28 chr10 66105638 66106022 -79483266 + L1MA9 LINE L1 2494 2871 -3677 1985 144 10 3 chr10 66106022 66106321 -79482967 + AluSx SINE Alu 1 301 -11 13091 178 44 28 chr10 66106321 66109932 -79479356 + L1MA9 LINE L1 2871 6543 -5 277 259 72 79 chr10 66109978 66110313 -79478975 + L1M3e LINE L1 1591 2130 -4253 3412 269 118 22 chr10 66110524 66112882 -79476406 + L1ME3A LINE L1 2420 5033 -1507 500 293 20 0 chr10 66113060 66113207 -79476081 + L2 LINE L2 2562 2711 -603 * 983 285 76 48 chr10 66113200 66113325 -79475963 + L2 LINE L2 2880 3000 -313 1951 126 10 7 chr10 66113325 66113626 -79475662 - AluSx SINE Alu -10 302 1 983 285 76 48 chr10 66113626 66113921 -79475367 + L2 LINE L2 3000 3312 -1 510 327 46 77 chr10 66114391 66114632 -79474656 + L1ME3A LINE L1 5696 5943 -621 287 64 0 21 chr10 66114632 66114679 -79474609 + (TAAA)n Simple_repeat Simple_repeat 3 48 0 510 327 46 77 chr10 66114679 66115020 -79474268 + L1ME3A LINE L1 5943 6263 -301 182 103 0 51 chr10 66115206 66115245 -79474043 + (TATG)n Simple_repeat Simple_repeat 2 38 0 1138 264 65 36 chr10 66115275 66115865 -79473423 + L1ME3 LINE L1 2898 3470 -2676 1940 179 146 16 chr10 66115865 66116311 -79472977 + MLT1D LTR MaLR 1 504 -1 1138 264 65 36 chr10 66116311 66116643 -79472645 + L1ME3 LINE L1 3470 4292 -1854 * 1607 223 142 38 chr10 66116640 66117218 -79472070 + L1MC4 LINE L1 6803 7440 -602 207 250 0 0 chr10 66117248 66117288 -79472000 + (TG)n Simple_repeat Simple_repeat 1 40 0 1460 275 106 34 chr10 66117315 66118858 -79470430 + L1ME3 LINE L1 4479 6127 -35 2031 133 0 7 chr10 66118911 66119213 -79470075 + AluSx SINE Alu 3 302 -10 213 186 34 0 chr10 66119532 66119591 -79469697 + T-rich Low_complexity Low_complexity 5 65 0 324 297 153 0 chr10 66121855 66121966 -79467322 - MIR3 SINE MIR -28 180 53 246 322 0 81 chr10 66122043 66122192 -79467096 - L2 LINE L2 -3 3310 3174 6128 147 19 26 chr10 66122957 66124135 -79465153 + L1MC1 LINE L1 5159 6333 0 211 194 0 0 chr10 66124332 66124368 -79464920 + (TG)n Simple_repeat Simple_repeat 1 36 0 3243 130 38 31 chr10 66124646 66125168 -79464120 - MER1A DNA MER1_type 0 527 2 2193 218 11 56 chr10 66125334 66125941 -79463347 + L1MB4 LINE L1 5597 6176 -4 244 308 35 21 chr10 66126861 66127004 -79462284 + Charlie8 DNA MER1_type 50 194 -2223 2275 127 32 19 chr10 66127385 66127755 -79461533 - THE1C LTR MaLR 0 375 1 23 0 0 0 chr10 66128340 66128363 -79460925 + AT_rich Low_complexity Low_complexity 1 23 0 300 234 39 0 chr10 66129210 66129287 -79460001 + MER103 DNA DNA 34 113 -53 212 220 186 0 chr10 66131062 66131121 -79458167 + L2 LINE L2 3229 3298 -15 193 71 0 48 chr10 66131706 66131748 -79457540 + (TTAA)n Simple_repeat Simple_repeat 3 42 0 1472 285 116 32 chr10 66132223 66132640 -79456648 + L2 LINE L2 2241 2622 -691 1797 169 21 3 chr10 66132640 66132924 -79456364 - AluJo SINE Alu -19 293 5 1472 285 116 32 chr10 66132924 66133495 -79455793 + L2 LINE L2 2622 3311 -2 2167 100 0 32 chr10 66133949 66134259 -79455029 - AluSq SINE Alu -13 300 1 987 209 82 65 chr10 66134597 66134889 -79454399 + AluJo SINE Alu 3 299 -3 21 36 0 0 chr10 66135166 66135194 -79454094 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr10 66135850 66135875 -79453413 + AT_rich Low_complexity Low_complexity 1 25 0 376 117 21 32 chr10 66136419 66136513 -79452775 + (TA)n Simple_repeat Simple_repeat 1 93 0 836 108 0 3 chr10 66136524 66136657 -79452631 - L1P LINE L1 -1505 4641 4511 387 0 0 0 chr10 66136782 66136825 -79452463 + (TTA)n Simple_repeat Simple_repeat 3 45 0 11717 77 15 8 chr10 66136825 66139210 -79450078 - L1PA7 LINE L1 -18 6136 3742 488 250 49 21 chr10 66139713 66139857 -79449431 + MIR SINE MIR 93 240 -22 23 33 0 0 chr10 66139857 66139887 -79449401 + AT_rich Low_complexity Low_complexity 1 30 0 906 211 13 69 chr10 66140086 66140318 -79448970 + MER20 DNA MER1_type 1 219 0 24 67 0 0 chr10 66141579 66141624 -79447664 + AT_rich Low_complexity Low_complexity 1 45 0 192 274 105 11 chr10 66143369 66143464 -79445824 + MIR SINE MIR 34 137 -71 196 316 40 26 chr10 66145366 66145442 -79443846 + L2 LINE L2 3227 3303 -10 282 29 0 0 chr10 66145765 66145800 -79443488 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 284 360 39 35 chr10 66146027 66146230 -79443058 - L2 LINE L2 -839 2475 2272 234 386 29 29 chr10 66146430 66146601 -79442687 - L2 LINE L2 -231 3041 2871 223 403 0 0 chr10 66146640 66146712 -79442576 - L2 LINE L2 -99 3173 3102 343 359 47 63 chr10 66147356 66147911 -79441377 - L2 LINE L2 -400 2914 2369 322 248 69 10 chr10 66147938 66148039 -79441249 - L1MC4 LINE L1 -1340 6702 6596 253 234 58 62 chr10 66148306 66148440 -79440848 - MIR SINE MIR -67 141 47 342 0 0 0 chr10 66148574 66148612 -79440676 + (A)n Simple_repeat Simple_repeat 1 38 0 427 137 147 0 chr10 66149336 66149431 -79439857 - MER5C DNA MER1_type -4 320 212 249 293 20 50 chr10 66149466 66149565 -79439723 - MER5C DNA MER1_type -228 96 1 38 39 0 0 chr10 66149677 66149729 -79439559 + AT_rich Low_complexity Low_complexity 1 52 0 3869 132 80 10 chr10 66149729 66150406 -79438882 - L1PA16 LINE L1 0 6166 5443 2679 170 33 6 chr10 66150406 66151042 -79438246 + L1P LINE L1 4768 5426 -739 235 298 53 13 chr10 66151602 66151753 -79437535 - MER103 DNA DNA -8 158 2 322 301 66 35 chr10 66151862 66152121 -79437167 + L1MC5 LINE L1 7641 7907 -54 2032 134 7 3 chr10 66152194 66152492 -79436796 - AluSq SINE Alu -14 299 1 23 33 0 0 chr10 66152581 66152611 -79436677 + AT_rich Low_complexity Low_complexity 1 30 0 424 279 84 32 chr10 66153439 66153593 -79435695 + MIR SINE MIR 7 168 -94 678 225 117 56 chr10 66155835 66155907 -79433381 - MIR SINE MIR -36 226 160 2135 130 0 0 chr10 66155907 66156214 -79433074 - AluSc SINE Alu -2 307 1 678 225 117 56 chr10 66156214 66156354 -79432934 - MIR SINE MIR -102 160 1 408 215 227 13 chr10 66156388 66156589 -79432699 + MER106B DNA MER1_type 1 1059 0 240 343 63 2 chr10 66157051 66157168 -79432120 + MIR SINE MIR 34 151 -57 1107 160 67 0 chr10 66158396 66158547 -79430741 - MER3 DNA MER1_type -1 208 40 5596 118 21 1 chr10 66158547 66159723 -79429565 + L1PA14 LINE L1 4953 6152 -9 180 0 0 0 chr10 66159723 66159743 -79429545 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1107 160 67 0 chr10 66159751 66159793 -79429495 - MER3 DNA MER1_type -169 40 2 1787 180 48 5 chr10 66160062 66160456 -79428832 - L1MB4 LINE L1 -1 6179 5769 248 0 0 30 chr10 66160690 66160723 -79428565 + (TTA)n Simple_repeat Simple_repeat 1 32 0 207 301 26 62 chr10 66160758 66160871 -79428417 + L3 LINE CR1 431 539 -1038 490 310 86 28 chr10 66160883 66161209 -79428079 - L3 LINE CR1 -182 1395 1051 180 125 0 0 chr10 66161328 66161360 -79427928 + (CCCA)n Simple_repeat Simple_repeat 3 34 0 333 304 35 9 chr10 66162891 66163006 -79426282 - MIR SINE MIR -34 228 111 1584 191 105 78 chr10 66163177 66163724 -79425564 + MLT1F1 LTR MaLR 2 565 -2 252 136 68 0 chr10 66163783 66163827 -79425461 - L2 LINE L2 -4 3309 3263 26 0 0 0 chr10 66163883 66163909 -79425379 + AT_rich Low_complexity Low_complexity 1 26 0 445 303 139 0 chr10 66163944 66164152 -79425136 + MIR SINE MIR 20 256 -6 189 0 0 0 chr10 66165192 66165213 -79424075 + (GAAA)n Simple_repeat Simple_repeat 2 22 0 466 243 216 39 chr10 66165309 66165568 -79423720 - L2 LINE L2 -4 3309 3005 397 248 50 10 chr10 66165696 66165797 -79423491 - L2 LINE L2 -561 2753 2649 219 69 0 0 chr10 66165814 66165843 -79423445 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 880 128 5 160 chr10 66165942 66166161 -79423127 - MER5A DNA MER1_type -4 185 1 809 183 120 37 chr10 66166689 66166880 -79422408 + MER63A DNA MER1_type 4 210 0 338 289 49 56 chr10 66167536 66167678 -79421610 - MER5A DNA MER1_type -6 183 43 * 366 262 43 50 chr10 66167564 66167705 -79421583 + MER5A DNA MER1_type 46 185 -4 482 371 25 59 chr10 66167718 66168004 -79421284 + L2 LINE L2 2994 3269 -3 182 260 104 97 chr10 66168119 66168273 -79421015 + MIR SINE MIR 82 236 -26 786 160 8 0 chr10 66168924 66169055 -79420233 + FLAM_A SINE Alu 2 133 0 351 338 66 7 chr10 66169385 66169536 -79419752 - MIR3 SINE MIR -47 161 2 199 246 0 35 chr10 66170929 66170986 -79418302 + MIR SINE MIR 162 216 -46 882 73 0 0 chr10 66171106 66171215 -79418073 + AluSp/q SINE Alu 197 305 -8 1199 89 6 0 chr10 66171475 66171644 -79417644 - L1PA4 LINE L1 -1 6154 5985 22 0 0 0 chr10 66172261 66172283 -79417005 + AT_rich Low_complexity Low_complexity 1 22 0 29 28 0 0 chr10 66173521 66173557 -79415731 + AT_rich Low_complexity Low_complexity 1 36 0 224 207 45 18 chr10 66173623 66173773 -79415515 + (TA)n Simple_repeat Simple_repeat 1 154 0 878 140 0 6 chr10 66175584 66175741 -79413547 + (TTCC)n Simple_repeat Simple_repeat 3 158 0 416 253 18 18 chr10 66176203 66176373 -79412915 + L1M4 LINE L1 3811 3980 -2166 1820 93 0 0 chr10 66176429 66176666 -79412622 + AluSg SINE Alu 25 261 -49 344 275 99 14 chr10 66176713 66176855 -79412433 + L1M4 LINE L1 4055 4208 -1938 181 364 86 19 chr10 66177578 66177740 -79411548 + MIR SINE MIR 53 225 -37 344 346 0 8 chr10 66177899 66178026 -79411262 + L2 LINE L2 3188 3313 0 576 194 50 21 chr10 66178071 66178283 -79411005 - L1MB4 LINE L1 -1 6179 5949 198 305 38 57 chr10 66178283 66178388 -79410900 - MIR SINE MIR -59 149 47 667 267 28 0 chr10 66178585 66178765 -79410523 - MIR SINE MIR -6 256 72 1003 186 85 117 chr10 66179026 66179309 -79409979 - L1ME2 LINE L1 -10 6154 5864 1975 146 0 0 chr10 66179309 66179597 -79409691 - AluSx SINE Alu -24 288 1 1003 186 85 117 chr10 66179597 66179653 -79409635 - L1ME2 LINE L1 -300 5864 5808 1858 160 14 0 chr10 66179653 66179814 -79409474 - AluJb SINE Alu -20 292 124 192 40 0 0 chr10 66179814 66179839 -79409449 + (TG)n Simple_repeat Simple_repeat 2 26 0 1858 160 14 0 chr10 66179839 66179965 -79409323 - AluJb SINE Alu -188 124 1 1003 186 85 117 chr10 66179965 66180069 -79409219 - L1ME2 LINE L1 -356 5808 5724 255 125 0 0 chr10 66180329 66180369 -79408919 + (TG)n Simple_repeat Simple_repeat 1 40 0 250 382 38 23 chr10 66181464 66181595 -79407693 - L2 LINE L2 -18 3254 3122 579 207 22 22 chr10 66181685 66181820 -79407468 + MLT1D LTR MaLR 1 135 -370 348 267 111 7 chr10 66181840 66181975 -79407313 + MLT1D LTR MaLR 319 467 0 31 26 0 0 chr10 66182612 66182650 -79406638 + AT_rich Low_complexity Low_complexity 1 38 0 1791 160 3 11 chr10 66182650 66182937 -79406351 - AluJb SINE Alu -25 287 3 1338 277 52 31 chr10 66182938 66183509 -79405779 + MLT1E LTR MaLR 26 590 -3 1610 314 65 48 chr10 66183566 66183805 -79405483 - L2 LINE L2 -372 2942 2709 1766 231 34 18 chr10 66183805 66184302 -79404986 - MLT1D LTR MaLR 0 505 1 1610 314 65 48 chr10 66184302 66184649 -79404639 - L2 LINE L2 -605 2709 2370 801 332 91 16 chr10 66184649 66184953 -79404335 + LTR33 LTR ERVL 1 356 -165 243 0 0 0 chr10 66184953 66184980 -79404308 + (TG)n Simple_repeat Simple_repeat 2 28 0 801 332 91 16 chr10 66184980 66185160 -79404128 + LTR33 LTR ERVL 356 521 0 1610 314 65 48 chr10 66185160 66185579 -79403709 - L2 LINE L2 -944 2370 1918 306 312 19 63 chr10 66185788 66185993 -79403295 - MIR SINE MIR 0 262 67 3429 227 73 39 chr10 66186141 66186155 -79403133 - L1MD2 LINE L1 -33 6326 6314 2391 152 39 5 chr10 66186155 66186569 -79402719 - MSTA LTR MaLR 0 428 1 3429 227 73 39 chr10 66186569 66187218 -79402070 - L1MD2 LINE L1 -45 6314 5602 489 76 0 0 chr10 66187218 66187284 -79402004 - L1PA4 LINE L1 -8 6147 6082 3429 227 73 39 chr10 66187284 66187750 -79401538 - L1MD2 LINE L1 -757 5602 5154 195 148 33 16 chr10 66187756 66187817 -79401471 + (TA)n Simple_repeat Simple_repeat 2 63 0 28 29 0 0 chr10 66189463 66189498 -79399790 + AT_rich Low_complexity Low_complexity 1 35 0 531 270 123 65 chr10 66189948 66190011 -79399277 + L3 LINE CR1 1110 1168 -409 985 228 53 56 chr10 66190011 66190349 -79398939 + MER102b DNA MER1_type 4 340 -1 531 270 123 65 chr10 66190349 66190626 -79398662 + L3 LINE CR1 1168 1470 -107 548 242 68 0 chr10 66191241 66191373 -79397915 + MER58A DNA MER1_type 2 142 0 602 146 31 54 chr10 66191374 66191504 -79397784 - Tigger7 DNA MER2_type 0 2487 2361 * 2848 189 11 4 chr10 66191499 66192034 -79397254 - Tigger7 DNA MER2_type -1940 547 9 388 205 12 0 chr10 66192053 66192136 -79397152 + MER58A DNA MER1_type 141 224 0 6271 23 0 0 chr10 66192605 66193332 -79395956 - L1PA2 LINE L1 -2 6153 5427 9218 26 1 0 chr10 66193332 66194465 -79394823 + L1P LINE L1 3820 4953 -1193 523 242 65 7 chr10 66194804 66194957 -79394331 + L1MC1 LINE L1 2 163 -5956 401 328 46 35 chr10 66195824 66196108 -79393180 + L2 LINE L2 2996 3282 -31 519 238 26 74 chr10 66196196 66196465 -79392823 + MER112 DNA MER1_type 1 256 0 573 187 65 13 chr10 66197530 66197685 -79391603 + L1MC1 LINE L1 3771 3933 -2196 4622 213 23 22 chr10 66197687 66199782 -79389506 + L1MC1 LINE L1 3876 5973 -343 835 216 44 23 chr10 66199981 66200300 -79388988 + MER34C LTR ERV1 59 427 -158 429 152 86 19 chr10 66200390 66200495 -79388793 + MER31-int LTR ERV1 877 988 -3948 1843 175 15 70 chr10 66200548 66201005 -79388283 + LTR9 LTR ERV1 1 432 -180 282 216 0 0 chr10 66202846 66202920 -79386368 + G-rich Low_complexity Low_complexity 1 74 0 490 89 83 18 chr10 66203006 66203174 -79386114 + (CATAT)n Simple_repeat Simple_repeat 2 180 0 485 51 5 107 chr10 66203193 66203389 -79385899 + (TA)n Simple_repeat Simple_repeat 2 177 0 706 25 0 101 chr10 66203417 66203616 -79385672 + (TA)n Simple_repeat Simple_repeat 2 180 0 320 54 0 89 chr10 66203627 66203739 -79385549 + (TA)n Simple_repeat Simple_repeat 2 103 0 301 361 98 8 chr10 66203792 66203914 -79385374 + MIR SINE MIR 1 134 -74 377 246 31 11 chr10 66203932 66204052 -79385236 + MIR SINE MIR 24 151 -57 692 294 169 69 chr10 66204064 66204442 -79384846 - L2 LINE L2 0 3272 2857 189 135 81 0 chr10 66204447 66204484 -79384804 + MIR SINE MIR 158 197 -65 23 33 0 0 chr10 66204597 66204627 -79384661 + AT_rich Low_complexity Low_complexity 1 30 0 2179 109 7 0 chr10 66204728 66205032 -79384256 + AluSx SINE Alu 1 306 -6 584 162 17 17 chr10 66205032 66205149 -79384139 + L1PA15 LINE L1 6033 6149 -16 236 300 95 58 chr10 66205453 66205696 -79383592 - L3 LINE CR1 -17 1560 1309 386 261 65 0 chr10 66205895 66205987 -79383301 + L2 LINE L2 3184 3281 -32 209 195 24 0 chr10 66206674 66206715 -79382573 - MIR3 SINE MIR -17 191 150 3519 283 115 37 chr10 66206838 66208624 -79380664 + L2 LINE L2 1256 3178 -135 2296 106 0 3 chr10 66208837 66209139 -79380149 - AluSx SINE Alu -11 301 1 325 256 44 22 chr10 66209298 66209388 -79379900 + MIR SINE MIR 106 197 -65 2506 261 47 14 chr10 66210334 66211036 -79378252 + L2 LINE L2 2277 3017 -296 2395 81 0 0 chr10 66211036 66211343 -79377945 - AluY SINE Alu -4 307 1 2506 261 47 14 chr10 66211343 66211468 -79377820 + L2 LINE L2 3017 3136 -177 769 230 105 25 chr10 66211506 66211971 -79377317 + MLT1H1 LTR MaLR 4 545 -10 471 261 0 84 chr10 66211982 66212124 -79377164 + L2 LINE L2 3184 3313 0 183 156 11 56 chr10 66213171 66213261 -79376027 + (TATATG)n Simple_repeat Simple_repeat 2 87 0 272 164 18 0 chr10 66215329 66215384 -79373904 + MLT1K LTR MaLR 513 568 -20 1286 204 71 0 chr10 66215418 66215698 -79373590 + AluJo SINE Alu 2 301 -11 22 56 0 0 chr10 66216714 66216750 -79372538 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr10 66216992 66217013 -79372275 + AT_rich Low_complexity Low_complexity 1 21 0 30 27 0 0 chr10 66218093 66218130 -79371158 + AT_rich Low_complexity Low_complexity 1 37 0 188 303 41 111 chr10 66218135 66218379 -79370909 - L3 LINE CR1 -219 1358 1132 229 150 100 0 chr10 66218932 66218972 -79370316 + Alu SINE Alu 125 168 -134 995 106 26 13 chr10 66219208 66219359 -79369929 - AluSg/x SINE Alu -23 287 135 2475 65 0 3 chr10 66220093 66220399 -79368889 + AluY SINE Alu 2 306 -5 2236 213 47 19 chr10 66220632 66221159 -79368129 - MER67A LTR ERV1 0 543 2 389 306 142 58 chr10 66221170 66221700 -79367588 + L2 LINE L2 2704 3310 -3 267 276 60 37 chr10 66222048 66222182 -79367106 + MIR SINE MIR 66 202 -60 1882 144 43 0 chr10 66222415 66222714 -79366574 + AluJb SINE Alu 1 312 0 22 0 0 0 chr10 66224039 66224061 -79365227 + AT_rich Low_complexity Low_complexity 1 22 0 314 239 94 34 chr10 66224263 66224441 -79364847 + MIR SINE MIR 47 233 -29 2214 110 0 16 chr10 66224541 66224859 -79364429 + AluSq SINE Alu 1 313 0 787 283 312 14 chr10 66225590 66226004 -79363284 + L2 LINE L2 708 1244 -2070 4599 197 66 32 chr10 66226108 66227032 -79362256 - Charlie1a DNA MER1_type -1681 1080 116 2030 66 0 4 chr10 66227032 66227291 -79361997 - AluY SINE Alu -15 296 39 4599 197 66 32 chr10 66227291 66227411 -79361877 - Charlie1a DNA MER1_type -2645 116 1 567 275 68 11 chr10 66227973 66228182 -79361106 + MIR SINE MIR 33 252 -10 2624 219 48 20 chr10 66228254 66229201 -79360087 + L1MEc LINE L1 2048 2988 -3227 2309 21 18 0 chr10 66229203 66229522 -79359766 - L1P2 LINE L1 -724 5431 5108 3378 36 0 5 chr10 66229522 66229939 -79359349 + L1PA4 LINE L1 5738 6152 -3 1151 203 151 23 chr10 66230051 66230399 -79358889 + MLT1F LTR MaLR 118 568 -27 217 307 57 11 chr10 66230480 66230568 -79358720 - L2 LINE L2 -458 2856 2765 180 318 56 65 chr10 66231362 66231469 -79357819 + MER5B DNA MER1_type 10 115 -63 422 277 148 15 chr10 66232403 66232605 -79356683 + MIR SINE MIR 33 261 -1 1334 68 6 23 chr10 66232850 66233026 -79356262 - AluSc SINE Alu -20 289 117 660 98 0 0 chr10 66233858 66233960 -79355328 + (TTCC)n Simple_repeat Simple_repeat 3 104 0 237 289 22 11 chr10 66233964 66234054 -79355234 + CT-rich Low_complexity Low_complexity 2 92 0 24 0 0 0 chr10 66235368 66235392 -79353896 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr10 66235971 66235994 -79353294 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr10 66236344 66236365 -79352923 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 66236445 66236466 -79352822 + AT_rich Low_complexity Low_complexity 1 21 0 787 236 181 24 chr10 66236744 66237032 -79352256 - MLT1E2 LTR MaLR -230 396 64 23 0 0 0 chr10 66237240 66237263 -79352025 + AT_rich Low_complexity Low_complexity 1 23 0 440 275 106 24 chr10 66237334 66237541 -79351747 + MIR SINE MIR 9 232 -30 1540 161 17 50 chr10 66238076 66238374 -79350914 + AluJo SINE Alu 1 288 -24 5860 223 53 33 chr10 66238750 66239700 -79349588 + L1MC/D LINE L1 3588 4517 -1702 1831 154 7 3 chr10 66239700 66239999 -79349289 + AluJb SINE Alu 1 300 -12 5860 223 53 33 chr10 66239999 66240899 -79348389 + L1MC/D LINE L1 4517 5474 -745 2756 153 70 2 chr10 66240911 66241409 -79347879 + L1MC3 LINE L1 6393 6924 -861 1156 191 132 10 chr10 66241401 66241704 -79347584 - L1MC3 LINE L1 -533 7252 6913 * 1818 229 56 5 chr10 66241704 66242115 -79347173 - L1MC4a LINE L1 -991 6817 6386 679 262 122 0 chr10 66242160 66242349 -79346939 + MIR SINE MIR 2 167 -95 2326 137 26 30 chr10 66242349 66242532 -79346756 + MSTB1 LTR MaLR 1 183 -249 2110 102 0 0 chr10 66242532 66242857 -79346431 - AluSg SINE Alu 0 325 1 2326 137 26 30 chr10 66242857 66243069 -79346219 + MSTB1 LTR MaLR 183 397 -35 2117 128 3 3 chr10 66243069 66243381 -79345907 - AluSx SINE Alu 0 312 1 2326 137 26 30 chr10 66243381 66243413 -79345875 + MSTB1 LTR MaLR 397 428 -4 679 262 122 0 chr10 66243413 66243444 -79345844 + MIR SINE MIR 167 249 -13 736 225 111 29 chr10 66243819 66244099 -79345189 + L1MC4 LINE L1 7734 8036 -6 22 70 0 0 chr10 66244186 66244229 -79345059 + AT_rich Low_complexity Low_complexity 1 43 0 1945 130 0 0 chr10 66247042 66247318 -79341970 + AluSx SINE Alu 35 310 -2 758 271 79 10 chr10 66247664 66247956 -79341332 + L1MC4 LINE L1 7591 7902 -140 668 199 8 15 chr10 66247972 66248103 -79341185 + FLAM_A SINE Alu 1 130 -3 240 108 0 0 chr10 66248116 66248153 -79341135 + L1MC4 LINE L1 8000 8036 -6 347 283 136 29 chr10 66248957 66249370 -79339918 + L1MEc LINE L1 1299 1755 -4641 21 89 0 0 chr10 66249412 66249468 -79339820 + AT_rich Low_complexity Low_complexity 1 56 0 313 258 87 26 chr10 66249654 66249883 -79339405 + L1MEc LINE L1 2156 2398 -3998 303 275 55 0 chr10 66249899 66250008 -79339280 + L1MEc LINE L1 2522 2636 -3579 453 304 30 11 chr10 66250073 66250336 -79338952 + L1MEc LINE L1 3289 3556 -2659 1750 168 0 10 chr10 66250425 66250716 -79338572 - AluJo SINE Alu -24 288 1 398 124 13 3 chr10 66251707 66251783 -79337505 + L1P LINE L1 5288 5362 -801 3330 135 28 60 chr10 66251851 66252505 -79336783 + L1MB3 LINE L1 5364 5996 -187 665 228 81 71 chr10 66252827 66253208 -79336080 - L1MC4 LINE L1 -11 8031 7647 21 57 0 0 chr10 66253255 66253290 -79335998 + AT_rich Low_complexity Low_complexity 1 35 0 466 262 160 32 chr10 66253324 66253695 -79335593 - L1MC4 LINE L1 -621 7421 7000 1905 146 0 3 chr10 66253934 66254249 -79335039 - AluJb SINE Alu 0 312 3 1176 123 0 17 chr10 66254261 66254464 -79334824 - AluSg/x SINE Alu 0 310 119 351 68 8 37 chr10 66254554 66254611 -79334677 - AluJb SINE Alu -177 125 77 1959 128 0 17 chr10 66254707 66255005 -79334283 + AluY SINE Alu 1 293 -18 36 0 0 0 chr10 66255879 66255915 -79333373 + AT_rich Low_complexity Low_complexity 1 36 0 187 291 128 0 chr10 66256093 66256179 -79333109 - MIR SINE MIR -50 212 116 22 0 0 0 chr10 66256212 66256234 -79333054 + AT_rich Low_complexity Low_complexity 1 22 0 2205 212 103 102 chr10 66256285 66256567 -79332721 - L1MC5 LINE L1 -149 7812 7532 4690 75 8 3 chr10 66256567 66257195 -79332093 + L1PA13 LINE L1 5514 6144 -19 2205 212 103 102 chr10 66257195 66257377 -79331911 - L1MC5 LINE L1 -429 7532 7352 2176 111 7 0 chr10 66257377 66257684 -79331604 - AluSp SINE Alu -4 309 1 2205 212 103 102 chr10 66257684 66257972 -79331316 - L1MC5 LINE L1 -609 7352 7066 264 77 0 0 chr10 66257972 66258011 -79331277 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2205 212 103 102 chr10 66258011 66258376 -79330912 - L1MC5 LINE L1 -895 7066 6692 22 35 0 0 chr10 66258481 66258510 -79330778 + AT_rich Low_complexity Low_complexity 1 29 0 256 350 70 51 chr10 66258913 66259070 -79330218 - L2 LINE L2 0 3313 3154 978 205 209 0 chr10 66260463 66260726 -79328562 + MER33 DNA MER1_type 7 324 0 28 48 0 0 chr10 66261024 66261066 -79328222 + AT_rich Low_complexity Low_complexity 1 42 0 577 57 0 100 chr10 66262117 66262426 -79326862 + (TA)n Simple_repeat Simple_repeat 1 278 0 463 68 0 135 chr10 66262474 66262681 -79326607 + (TA)n Simple_repeat Simple_repeat 2 180 0 482 65 0 135 chr10 66262697 66262897 -79326391 + (TA)n Simple_repeat Simple_repeat 1 173 0 336 254 0 0 chr10 66262935 66262998 -79326290 + L2 LINE L2 3202 3264 -8 342 261 146 18 chr10 66263072 66263237 -79326051 + MER5A DNA MER1_type 1 186 -3 308 327 0 9 chr10 66263415 66263522 -79325766 + GA-rich Low_complexity Low_complexity 1 106 0 184 143 20 82 chr10 66264157 66264206 -79325082 - L2 LINE L2 0 3313 3268 312 315 126 14 chr10 66264547 66264690 -79324598 + MIR3 SINE MIR 23 181 -27 2034 121 7 3 chr10 66264736 66265026 -79324262 + AluSx SINE Alu 1 291 -21 1810 135 156 13 chr10 66265145 66265523 -79323765 - MSTB1 LTR MaLR 0 432 1 672 377 0 0 chr10 66265541 66265798 -79323490 - MIR SINE MIR 0 262 6 272 253 0 38 chr10 66265794 66265873 -79323415 + L2 LINE L2 3238 3313 0 * 1772 212 45 25 chr10 66266441 66266890 -79322398 - L1ME3A LINE L1 0 6668 6211 319 175 0 0 chr10 66266919 66266976 -79322312 + MER89 LTR ERV1 9 65 -494 2084 185 11 3 chr10 66266987 66267366 -79321922 + MER89 LTR ERV1 178 559 0 1239 258 46 6 chr10 66267370 66267806 -79321482 - L1ME3A LINE L1 -481 6187 5734 4918 265 72 30 chr10 66267817 66268797 -79320491 - L1ME3A LINE L1 -1019 5625 4687 2324 75 0 0 chr10 66268797 66269090 -79320198 + AluY SINE Alu 1 293 -18 4918 265 72 30 chr10 66269090 66269356 -79319932 - L1ME3A LINE L1 -1957 4687 4434 2324 85 0 0 chr10 66269356 66269662 -79319626 - AluY SINE Alu -5 306 1 4918 265 72 30 chr10 66269662 66269732 -79319556 - L1ME3A LINE L1 -2210 4434 4368 225 0 0 0 chr10 66269732 66269757 -79319531 + (CA)n Simple_repeat Simple_repeat 2 26 0 4918 265 72 30 chr10 66269757 66270819 -79318469 - L1ME3A LINE L1 -2276 4368 3146 418 242 46 41 chr10 66270880 66270915 -79318373 - L1ME3A LINE L1 -3634 3010 2977 1893 179 40 3 chr10 66270915 66271267 -79318021 - MLT1A1 LTR MaLR 0 365 1 418 242 46 41 chr10 66271267 66271403 -79317885 - L1ME3A LINE L1 -3667 2977 2835 2163 170 26 34 chr10 66271403 66271821 -79317467 - MER47B DNA MER2_type -2 416 2 418 242 46 41 chr10 66271821 66271867 -79317421 - L1ME3A LINE L1 -3809 2835 2791 1326 186 0 0 chr10 66271877 66272097 -79317191 - ERVL LTR ERVL -1111 4653 4434 3000 171 8 19 chr10 66272122 66272636 -79316652 - MLT2B3 LTR ERVL -46 508 1 20552 146 26 11 chr10 66272636 66274169 -79315119 - ERVL-B3 LTR ERVL -7 5757 4248 2565 98 16 22 chr10 66274169 66274535 -79314753 + THE1B LTR MaLR 1 364 0 20552 146 26 11 chr10 66274535 66276353 -79312935 - ERVL-B3 LTR ERVL -1516 4248 2356 1997 140 12 39 chr10 66276343 66276679 -79312609 + ERVL LTR ERVL 4858 5184 -580 * 449 267 41 37 chr10 66276685 66277076 -79312212 - L1MDa LINE L1 -3890 2754 2409 366 317 13 13 chr10 66277180 66277404 -79311884 - L1MDa LINE L1 -4574 2251 2028 1641 245 71 42 chr10 66277866 66278385 -79310903 + MLT1F LTR MaLR 9 542 0 449 319 40 36 chr10 66278556 66278832 -79310456 + MLT1F-int LTR MaLR 300 576 -795 517 269 29 116 chr10 66279535 66279881 -79309407 + MLT1F-int LTR MaLR 1056 1371 0 879 289 62 4 chr10 66279899 66280155 -79309133 + MLT1F LTR MaLR 38 308 -234 683 70 147 32 chr10 66280155 66280278 -79309010 + THE1B LTR MaLR 1 132 -243 9621 93 16 7 chr10 66280278 66281576 -79307712 + THE1B-int LTR MaLR 271 1580 0 2218 116 53 28 chr10 66281576 66281931 -79307357 + THE1B LTR MaLR 1 364 0 750 263 20 61 chr10 66281933 66282180 -79307108 + MLT1F LTR MaLR 331 567 0 1765 158 7 0 chr10 66282365 66282638 -79306650 - 7SLRNA srpRNA srpRNA 0 320 46 1300 290 69 26 chr10 66282642 66283387 -79305901 + L1MEc LINE L1 522 1305 -5091 2364 94 0 3 chr10 66283387 66283695 -79305593 + AluSq SINE Alu 1 307 -6 1300 290 69 26 chr10 66283695 66283750 -79305538 + L1MEc LINE L1 1305 1356 -5040 640 246 43 16 chr10 66283843 66284030 -79305258 + LTR41 LTR ERVL 1 192 -581 310 238 16 0 chr10 66284491 66284554 -79304734 - L1MDa LINE L1 -4875 1771 1708 5585 238 67 26 chr10 66284559 66286180 -79303108 - L1MDa LINE L1 -4840 1702 15 405 241 85 25 chr10 66286210 66286621 -79302667 + L1M4 LINE L1 4382 4767 -1379 2147 133 0 0 chr10 66286621 66286929 -79302359 - AluSx SINE Alu -4 308 1 1355 195 79 79 chr10 66286929 66287360 -79301928 + MSTB1 LTR MaLR 1 431 -1 405 241 85 25 chr10 66287360 66287420 -79301868 + L1M4 LINE L1 4766 4917 -1229 1848 120 30 0 chr10 66287477 66287743 -79301545 - AluSx SINE Alu -38 274 1 860 71 0 0 chr10 66287782 66287895 -79301393 + MER41B LTR ERV1 515 627 -8 4561 144 13 0 chr10 66287900 66288581 -79300707 + MER41B-int LTR ERV1 1 690 -5256 2224 122 69 8 chr10 66288582 66288944 -79300344 + MER41B-int LTR ERV1 1392 1775 -4171 824 157 50 0 chr10 66288931 66289071 -79300217 + MER41B-int LTR ERV1 2476 2622 -4915 * 2905 123 76 23 chr10 66289087 66289662 -79299626 + MER41B-int LTR ERV1 2212 3011 -3252 2136 122 3 0 chr10 66289662 66289956 -79299332 + AluSx SINE Alu 1 295 -17 2905 123 76 23 chr10 66289956 66290080 -79299208 + MER41B-int LTR ERV1 3011 3127 -3136 * 12898 95 22 5 chr10 66290058 66292281 -79297007 + MER41B-int LTR ERV1 2879 5943 -3 3244 125 83 0 chr10 66292282 66292787 -79296501 + MER41B LTR ERV1 1 547 -88 262 155 52 0 chr10 66292787 66292845 -79296443 + L1M4 LINE L1 4942 5002 -1144 785 273 36 21 chr10 66292866 66293090 -79296198 + MLT2B1 LTR ERVL 257 486 -34 446 0 19 0 chr10 66293090 66293144 -79296144 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 785 273 36 21 chr10 66293144 66293180 -79296108 + MLT2B1 LTR ERVL 486 520 0 814 247 60 78 chr10 66293187 66293544 -79295744 + L1ME LINE L1 4765 5127 -1019 520 94 0 0 chr10 66293544 66293629 -79295659 + L1PA16 LINE L1 6077 6161 -5 814 247 60 78 chr10 66293629 66293750 -79295538 + L1ME LINE L1 5127 5236 -910 3382 186 100 12 chr10 66293750 66294509 -79294779 - LTR1B LTR ERV1 0 826 1 814 247 60 78 chr10 66294509 66294543 -79294745 + L1ME LINE L1 5236 5269 -877 296 271 28 9 chr10 66294544 66294651 -79294637 + (TA)n Simple_repeat Simple_repeat 1 109 0 60 83 0 0 chr10 66294711 66294855 -79294433 + AT_rich Low_complexity Low_complexity 1 144 0 742 222 77 0 chr10 66294872 66295066 -79294222 + L1ME LINE L1 5318 5526 -636 1326 201 17 78 chr10 66295069 66295427 -79293861 + MLT1A2 LTR MaLR 39 374 0 642 273 58 0 chr10 66295613 66295785 -79293503 + MLT1J LTR MaLR 18 199 -312 1692 164 39 3 chr10 66295788 66296074 -79293214 - MER61D LTR ERV1 0 501 206 637 348 60 61 chr10 66296079 66296819 -79292469 - L2 LINE L2 -305 2967 2236 4728 230 67 59 chr10 66298320 66302047 -79287241 + L1MB4 LINE L1 4 3796 -2848 1680 194 11 53 chr10 66302059 66302436 -79286852 - MLT1B LTR MaLR 0 390 30 1019 238 24 66 chr10 66302441 66302820 -79286468 + L1MB4 LINE L1 3792 4154 -2490 * 3701 182 50 36 chr10 66302818 66303433 -79285855 + L1MB4 LINE L1 4883 5488 -1184 1731 189 56 54 chr10 66303433 66303899 -79285389 + MLT1C LTR MaLR 1 467 0 3701 182 50 36 chr10 66303899 66304688 -79284600 + L1MB4 LINE L1 5488 6330 -342 516 167 0 0 chr10 66304688 66304795 -79284493 + L1MB4 LINE L1 6571 6678 0 521 272 12 12 chr10 66304963 66305132 -79284156 - L1M4 LINE L1 -3235 2911 2743 31 26 0 0 chr10 66305687 66305725 -79283563 + AT_rich Low_complexity Low_complexity 1 38 0 234 226 32 16 chr10 66306084 66306146 -79283142 - MIR SINE MIR -129 133 71 408 345 68 30 chr10 66306154 66306389 -79282899 - MIR SINE MIR -4 258 15 281 250 62 18 chr10 66306720 66306832 -79282456 - L1MC4a LINE L1 -1897 5911 5795 15440 177 16 4 chr10 66306970 66310743 -79278545 - L1PA13 LINE L1 -5 6158 2346 204 216 0 0 chr10 66311563 66311600 -79277688 + (CA)n Simple_repeat Simple_repeat 2 38 0 288 242 15 0 chr10 66311840 66311906 -79277382 + MER103 DNA DNA 57 123 -43 471 248 140 62 chr10 66312227 66312661 -79276627 + MLT1H1 LTR MaLR 14 489 -66 728 159 0 43 chr10 66312911 66313049 -79276239 + MER3 DNA MER1_type 78 209 0 22 35 0 0 chr10 66313413 66313442 -79275846 + AT_rich Low_complexity Low_complexity 1 29 0 304 198 75 75 chr10 66314270 66314376 -79274912 + MER5B DNA MER1_type 5 110 -68 24 32 0 0 chr10 66315016 66315047 -79274241 + AT_rich Low_complexity Low_complexity 1 31 0 684 198 6 64 chr10 66315996 66316035 -79273253 - MER45A DNA AcHobo -1433 148 108 416 107 12 83 chr10 66316035 66316119 -79273169 + MADE1 DNA Mariner 1 78 -2 684 198 6 64 chr10 66316119 66316236 -79273052 - MER45A DNA AcHobo -1473 108 1 1235 124 10 40 chr10 66316292 66316493 -79272795 + MER2 DNA MER2_type 3 197 -148 25 90 0 0 chr10 66316497 66316564 -79272724 + AT_rich Low_complexity Low_complexity 1 67 0 1751 156 0 41 chr10 66317673 66317968 -79271320 + AluJb SINE Alu 1 283 -29 388 246 87 64 chr10 66318013 66318371 -79270917 + L1MC4a LINE L1 5649 6014 -1794 2118 105 7 14 chr10 66318501 66318797 -79270491 + AluSg SINE Alu 1 294 -16 1429 200 96 0 chr10 66319074 66319354 -79269934 - AluJo SINE Alu -5 307 1 24 0 0 0 chr10 66319861 66319885 -79269403 + AT_rich Low_complexity Low_complexity 1 24 0 27 29 0 0 chr10 66319967 66320001 -79269287 + AT_rich Low_complexity Low_complexity 1 34 0 406 320 52 18 chr10 66320418 66320608 -79268680 + MLT1J LTR MaLR 54 290 -221 4175 90 40 2 chr10 66320608 66321186 -79268102 + MER4A LTR ERV1 1 600 0 406 320 52 18 chr10 66321186 66321209 -79268079 + MLT1J LTR MaLR 290 311 -200 1162 174 61 9 chr10 66321348 66321623 -79267665 - AluJb SINE Alu 0 370 85 2683 161 101 6 chr10 66321722 66322256 -79267032 + LTR36 LTR ERV1 3 587 -24 198 306 69 0 chr10 66322293 66322365 -79266923 - L2 LINE L2 -1 3271 3195 21 36 0 0 chr10 66322376 66322404 -79266884 + AT_rich Low_complexity Low_complexity 1 28 0 676 271 37 28 chr10 66322434 66322624 -79266664 + LTR33 LTR ERVL 12 206 -315 1765 154 64 45 chr10 66322624 66322981 -79266307 - THE1B LTR MaLR 0 364 1 676 271 37 28 chr10 66322981 66323004 -79266284 + LTR33 LTR ERVL 206 227 -294 284 236 0 0 chr10 66323165 66323237 -79266051 + LTR33 LTR ERVL 436 507 -14 939 252 164 0 chr10 66324726 66325012 -79264276 + MLT1G LTR MaLR 10 342 -248 1543 206 125 82 chr10 66325024 66325744 -79263544 + LTR1B LTR ERV1 1 751 -75 301 279 157 0 chr10 66325857 66325997 -79263291 + MLT1G LTR MaLR 318 479 -76 1043 220 104 52 chr10 66326160 66326506 -79262782 - MLT1A1 LTR MaLR 0 365 2 186 329 197 0 chr10 66327055 66327131 -79262157 - L2 LINE L2 -5 3267 3177 2468 71 3 0 chr10 66328128 66328438 -79260850 - AluY SINE Alu 0 311 1 237 250 0 0 chr10 66328753 66328805 -79260483 + Tigger5 DNA MER2_type 4 55 -2268 201 278 75 68 chr10 66329043 66329176 -79260112 - MIR3 SINE MIR -69 139 6 398 343 6 17 chr10 66329311 66329486 -79259802 + L2 LINE L2 3109 3281 -32 1253 199 100 96 chr10 66329508 66330070 -79259218 - LTR49 LTR ERV1 -30 565 2 2214 71 0 3 chr10 66330536 66330847 -79258441 - AluY SINE Alu 0 310 1 221 0 35 0 chr10 66330917 66330946 -79258342 + (TG)n Simple_repeat Simple_repeat 2 31 0 2631 87 27 11 chr10 66331200 66331569 -79257719 - THE1C LTR MaLR 0 375 1 287 328 8 45 chr10 66331726 66331860 -79257428 + MIR SINE MIR 90 218 -44 495 223 91 0 chr10 66332189 66332310 -79256978 + MER94 DNA DNA 1 132 -2 469 263 109 9 chr10 66332674 66332869 -79256419 - MLT1L LTR MaLR -87 528 233 216 0 0 0 chr10 66332887 66332911 -79256377 + (TTTAG)n Simple_repeat Simple_repeat 3 26 0 831 288 125 41 chr10 66332994 66333561 -79255727 + L2 LINE L2 2675 3313 0 380 228 41 48 chr10 66333585 66333730 -79255558 - MLT1L LTR MaLR -471 144 1 312 275 114 8 chr10 66334952 66335083 -79254205 - L2 LINE L2 0 3313 3169 305 202 34 34 chr10 66335246 66335335 -79253953 - L1ME4a LINE L1 -21 6100 6012 876 257 98 10 chr10 66335335 66335727 -79253561 + LTR33 LTR ERVL 1 515 -6 288 273 142 0 chr10 66335784 66335989 -79253299 - L1ME4a LINE L1 -215 5906 5673 726 304 111 3 chr10 66336016 66336378 -79252910 - L1ME4a LINE L1 -1074 5072 4672 22 0 0 0 chr10 66336427 66336449 -79252839 + AT_rich Low_complexity Low_complexity 1 22 0 2839 216 41 56 chr10 66336454 66337518 -79251770 - L1ME1 LINE L1 -31 6135 5093 28 0 0 0 chr10 66337528 66337556 -79251732 + AT_rich Low_complexity Low_complexity 1 28 0 315 261 45 23 chr10 66337604 66337692 -79251596 - L1MC4 LINE L1 -1339 6703 6614 22 35 0 0 chr10 66337720 66337749 -79251539 + AT_rich Low_complexity Low_complexity 1 29 0 415 201 96 100 chr10 66337749 66337978 -79251310 - L1ME1 LINE L1 -1062 5084 4857 292 151 0 27 chr10 66338075 66338148 -79251140 + GA-rich Low_complexity Low_complexity 2 72 0 1299 85 94 14 chr10 66340051 66340263 -79249025 + L1PA10 LINE L1 5939 6167 -1 29 0 0 0 chr10 66340277 66340306 -79248982 + AT_rich Low_complexity Low_complexity 1 29 0 457 16 32 0 chr10 66340306 66340368 -79248920 + (TA)n Simple_repeat Simple_repeat 2 65 0 693 205 8 0 chr10 66340811 66340933 -79248355 - FLAM_C SINE Alu -20 123 1 446 307 111 46 chr10 66341542 66341910 -79247378 + MLT1K LTR MaLR 90 481 -107 225 244 219 16 chr10 66341914 66342037 -79247251 - MLT1L LTR MaLR -8 607 460 361 247 52 33 chr10 66342069 66342249 -79247039 - MLT1L LTR MaLR -257 358 110 30 59 0 0 chr10 66342449 66342500 -79246788 + AT_rich Low_complexity Low_complexity 1 51 0 2282 111 0 3 chr10 66342509 66342806 -79246482 + AluSx SINE Alu 1 296 -16 553 210 65 93 chr10 66343256 66343314 -79245974 + L1MC5 LINE L1 7480 7538 -423 2120 140 0 3 chr10 66343314 66343622 -79245666 - AluSx SINE Alu -5 307 1 553 210 65 93 chr10 66343622 66344024 -79245264 + L1MC5 LINE L1 7538 7927 -34 2061 106 11 3 chr10 66344360 66344672 -79244616 + AluSx SINE Alu 1 314 0 1682 189 16 45 chr10 66344987 66345362 -79243926 + MLT1A1 LTR MaLR 2 365 0 1194 155 18 18 chr10 66345362 66345734 -79243554 + MLT1A1-int LTR MaLR 1 432 -1303 192 77 0 0 chr10 66345734 66345760 -79243528 + (CTATT)n Simple_repeat Simple_repeat 5 30 0 306 245 159 49 chr10 66345777 66345940 -79243348 + MIR SINE MIR 23 203 -59 1002 76 62 0 chr10 66346287 66346431 -79242857 - L1PA11 LINE L1 -4 6170 6018 738 201 0 0 chr10 66346735 66346874 -79242414 - FLAM_C SINE Alu -4 139 1 21 36 0 0 chr10 66347247 66347275 -79242013 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr10 66348856 66348891 -79240397 + AT_rich Low_complexity Low_complexity 1 35 0 23 33 0 0 chr10 66349528 66349558 -79239730 + AT_rich Low_complexity Low_complexity 1 30 0 26 64 0 0 chr10 66349620 66349667 -79239621 + AT_rich Low_complexity Low_complexity 1 47 0 1693 153 16 33 chr10 66350291 66350598 -79238690 + AluJb SINE Alu 1 302 -10 5852 140 146 90 chr10 66350868 66352487 -79236801 - pTR5 LTR ERV1 -1 2437 606 1951 110 0 24 chr10 66352487 66352777 -79236511 + AluSq SINE Alu 31 313 0 2313 65 13 16 chr10 66353234 66353544 -79235744 - AluY SINE Alu -2 309 1 397 298 73 23 chr10 66354074 66354275 -79235013 - MIR SINE MIR -30 232 23 476 318 66 16 chr10 66354373 66354631 -79234657 - MLT1I LTR MaLR -60 349 79 2111 91 4 4 chr10 66355454 66355730 -79233558 - AluSg SINE Alu -34 276 1 319 252 99 60 chr10 66356381 66356532 -79232756 + L1MDa LINE L1 1318 1474 -5066 863 277 90 32 chr10 66356615 66357215 -79232073 + L1M4 LINE L1 4067 4701 -1445 1304 194 40 53 chr10 66357508 66357549 -79231739 - Charlie2 DNA MER1_type 0 2862 2822 2370 116 21 93 chr10 66357549 66357885 -79231403 - L1MA4A LINE L1 0 6303 5944 198 118 0 0 chr10 66357885 66357919 -79231369 + (TCTCTG)n Simple_repeat Simple_repeat 3 36 0 2370 116 21 93 chr10 66357919 66357950 -79231338 - L1MA4A LINE L1 -359 5944 5912 1687 186 0 27 chr10 66357950 66358246 -79231042 - AluJb SINE Alu -24 288 1 2370 116 21 93 chr10 66358246 66358403 -79230885 - L1MA4A LINE L1 -391 5912 5816 1304 194 40 53 chr10 66358403 66358830 -79230458 - Charlie2 DNA MER1_type -40 2822 2400 250 243 29 0 chr10 66358825 66358895 -79230393 - Charlie2 DNA MER1_type -618 2244 2173 * 2072 113 7 0 chr10 66358922 66359205 -79230083 - AluSx SINE Alu -27 285 1 543 251 118 41 chr10 66359205 66359476 -79229812 - Charlie2 DNA MER1_type -2538 324 33 30 45 0 0 chr10 66359896 66359940 -79229348 + AT_rich Low_complexity Low_complexity 1 44 0 652 301 116 29 chr10 66360313 66360900 -79228388 - L1ME2 LINE L1 -261 5903 5266 274 274 189 47 chr10 66361083 66361189 -79228099 - MIR SINE MIR -70 192 72 419 92 0 0 chr10 66364924 66364989 -79224299 - MER116 DNA Mariner -1 79 15 345 317 118 27 chr10 66365752 66365973 -79223315 + MIR SINE MIR 21 261 -1 309 249 148 55 chr10 66366064 66366281 -79223007 - L1ME4a LINE L1 -16 6105 5869 902 195 115 10 chr10 66367264 66367464 -79221824 - MER58A DNA MER1_type -3 221 1 520 227 32 81 chr10 66367784 66367969 -79221319 - MER5B DNA MER1_type -2 176 1 1647 219 87 7 chr10 66369167 66369592 -79219696 - MLT1C LTR MaLR 0 467 9 262 320 73 68 chr10 66370447 66370653 -79218635 - MIR3 SINE MIR -1 207 1 361 263 108 65 chr10 66370972 66371006 -79218282 + MIR SINE MIR 69 100 -162 2143 108 0 38 chr10 66371006 66371321 -79217967 - AluSc SINE Alu -6 303 1 361 263 108 65 chr10 66371321 66371472 -79217816 + MIR SINE MIR 100 262 0 189 0 0 0 chr10 66372125 66372146 -79217142 + (CA)n Simple_repeat Simple_repeat 2 22 0 1778 197 0 0 chr10 66372830 66373135 -79216153 + AluJb SINE Alu 1 305 -7 2390 131 17 0 chr10 66373352 66373710 -79215578 - THE1B LTR MaLR 0 364 1 699 212 159 0 chr10 66374380 66374550 -79214738 + MER105 DNA DNA 2 198 -6 209 371 0 0 chr10 66375425 66375495 -79213793 + MIR SINE MIR 116 185 -77 257 238 63 98 chr10 66375834 66375977 -79213311 - L1MC4 LINE L1 0 8042 7905 731 261 123 99 chr10 66376015 66376369 -79212919 - L1MC4 LINE L1 -124 7918 7574 1874 152 0 14 chr10 66376369 66376659 -79212629 + AluJo SINE Alu 11 296 -16 731 261 123 99 chr10 66376659 66377469 -79211819 - L1MC4 LINE L1 -468 7574 6572 303 231 44 0 chr10 66377567 66377658 -79211630 - L1MC4 LINE L1 -5 8037 7943 1733 149 0 90 chr10 66377681 66378024 -79211264 - AluJo SINE Alu 0 312 1 210 265 0 0 chr10 66378078 66378127 -79211161 + (TATATG)n Simple_repeat Simple_repeat 2 50 0 1995 129 139 16 chr10 66378161 66378542 -79210746 - MSTA LTR MaLR 0 428 1 587 166 115 29 chr10 66378694 66378833 -79210455 - L1ME2 LINE L1 -169 5995 5845 519 259 19 12 chr10 66378857 66379019 -79210269 - L1ME LINE L1 -5902 168 6 21 36 0 0 chr10 66379039 66379067 -79210221 + AT_rich Low_complexity Low_complexity 1 28 0 442 307 71 28 chr10 66379402 66379685 -79209603 - L1MEc LINE L1 -3873 2523 2229 22 35 0 0 chr10 66379797 66379826 -79209462 + AT_rich Low_complexity Low_complexity 1 29 0 450 152 63 0 chr10 66379884 66379963 -79209325 + MSTB LTR MaLR 343 426 0 312 315 20 34 chr10 66380050 66380199 -79209089 - HAL1b LINE L1 -517 831 685 624 282 130 21 chr10 66380217 66380741 -79208547 - HAL1b LINE L1 -703 645 65 1984 150 53 3 chr10 66381226 66381565 -79207723 - Tigger7 DNA MER2_type -11 2576 2221 1588 186 40 50 chr10 66381562 66381752 -79207536 - Tigger7 DNA MER2_type -2189 298 111 * 1900 163 0 3 chr10 66381752 66382058 -79207230 + AluJb SINE Alu 1 305 -7 1588 186 40 50 chr10 66382058 66382168 -79207120 - Tigger7 DNA MER2_type -2376 111 1 195 259 173 0 chr10 66382919 66383000 -79206288 - MIR SINE MIR -64 198 104 266 264 36 82 chr10 66383103 66383213 -79206075 - L2 LINE L2 -1 3312 3208 208 200 146 0 chr10 66386967 66387022 -79202266 - MIR3 SINE MIR -133 75 13 357 318 0 9 chr10 66387061 66387168 -79202120 + L2 LINE L2 3160 3265 -7 21 0 0 0 chr10 66388266 66388287 -79201001 + AT_rich Low_complexity Low_complexity 1 21 0 570 307 22 75 chr10 66389344 66389463 -79199825 + L1 LINE L1 4054 4178 -1968 1905 47 0 0 chr10 66389463 66389697 -79199591 + L1PA4 LINE L1 5919 6152 -3 570 307 22 75 chr10 66389697 66389752 -79199536 + L1 LINE L1 4178 4234 -1912 1735 130 16 65 chr10 66389752 66390060 -79199228 + AluSx SINE Alu 1 293 -19 570 307 22 75 chr10 66390060 66390298 -79198990 + L1 LINE L1 4234 4445 -1701 1619 165 20 23 chr10 66390536 66390684 -79198604 + AluJo SINE Alu 2 149 -163 2018 97 0 4 chr10 66390684 66390951 -79198337 + AluY SINE Alu 1 266 -45 1619 165 20 23 chr10 66390951 66391105 -79198183 + AluJo SINE Alu 149 303 -9 194 373 88 0 chr10 66394802 66394904 -79194384 - L2 LINE L2 -4 3268 3158 3285 180 61 69 chr10 66395445 66396332 -79192956 - L1MA9 LINE L1 -38 6274 5395 1817 145 24 71 chr10 66396839 66397218 -79192070 - MER46B DNA MER2_type 0 236 1 1231 225 65 127 chr10 66397350 66398160 -79191128 - L1MC5 LINE L1 -263 7698 6964 1389 159 124 21 chr10 66398160 66398443 -79190845 - AluJb SINE Alu 0 312 1 1231 225 65 127 chr10 66398443 66398670 -79190618 - L1MC5 LINE L1 -997 6964 6725 523 256 66 25 chr10 66398938 66399180 -79190108 + MER112 DNA MER1_type 2 253 -3 1037 181 106 0 chr10 66400264 66400463 -79188825 - AluSg/x SINE Alu -9 303 84 472 169 0 0 chr10 66400513 66400590 -79188698 - L1MB4 LINE L1 -66 6114 6038 258 200 129 0 chr10 66400596 66400681 -79188607 + MSTB LTR MaLR 11 106 -320 649 183 26 9 chr10 66401291 66401406 -79187882 + FLAM_C SINE Alu 1 117 -16 369 0 0 0 chr10 66401406 66401447 -79187841 + (CA)n Simple_repeat Simple_repeat 2 42 0 1583 147 19 51 chr10 66402297 66402418 -79186870 + AluJo SINE Alu 1 124 -188 351 0 0 0 chr10 66402418 66402457 -79186831 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 1583 147 19 51 chr10 66402457 66402649 -79186639 + AluJo SINE Alu 124 304 -8 928 136 61 0 chr10 66403481 66403628 -79185660 - AluSg/x SINE Alu -15 295 140 26 50 0 0 chr10 66404123 66404163 -79185125 + AT_rich Low_complexity Low_complexity 1 40 0 1157 172 5 23 chr10 66404619 66404834 -79184454 + AluJo SINE Alu 87 297 -15 25 31 0 0 chr10 66405482 66405514 -79183774 + GC_rich Low_complexity Low_complexity 1 32 0 484 369 45 29 chr10 66406022 66406334 -79182954 - MLT1K LTR MaLR -235 353 37 317 333 11 0 chr10 66406692 66406779 -79182509 + LTR50 LTR ERVL 387 474 -321 1110 108 38 0 chr10 66407809 66408021 -79181267 + AluSp SINE Alu 149 366 0 607 205 0 0 chr10 66408124 66408241 -79181047 - AluSg/x SINE Alu -10 302 186 24 53 0 0 chr10 66409337 66409375 -79179913 + AT_rich Low_complexity Low_complexity 1 38 0 237 275 33 55 chr10 66409971 66410062 -79179226 - MIR SINE MIR -127 135 47 253 355 64 47 chr10 66412051 66412223 -79177065 - L1M2 LINE L1 -5896 953 779 25 31 0 0 chr10 66412616 66412648 -79176640 + AT_rich Low_complexity Low_complexity 1 32 0 518 270 68 0 chr10 66412671 66412834 -79176454 - MER5B DNA MER1_type -4 174 1 1604 211 41 40 chr10 66414438 66414932 -79174356 + L1MD3 LINE L1 7160 7829 -151 41 82 0 0 chr10 66414949 66415046 -79174242 + AT_rich Low_complexity Low_complexity 1 97 0 241 191 0 0 chr10 66415049 66415096 -79174192 + L1MC4 LINE L1 7762 7808 -234 336 274 40 160 chr10 66415729 66416259 -79173029 + L1M2 LINE L1 652 1117 -5732 1490 208 11 36 chr10 66417249 66417614 -79171674 + L1MA8 LINE L1 5822 6177 -114 1056 68 5 47 chr10 66417778 66417968 -79171320 + AluY SINE Alu 1 182 -129 185 354 31 0 chr10 66418214 66418279 -79171009 - L2 LINE L2 -1017 2297 2231 336 307 10 0 chr10 66418350 66418451 -79170837 - MLT1L LTR MaLR -372 243 142 1076 268 104 6 chr10 66418618 66418946 -79170342 - MLT1A1 LTR MaLR -2 363 4 2351 112 3 0 chr10 66420482 66420794 -79168494 - AluSp SINE Alu 0 313 1 338 264 39 23 chr10 66421020 66421149 -79168139 + MIR SINE MIR 96 226 -36 1655 144 42 83 chr10 66422685 66422998 -79166290 - AluJb SINE Alu -12 300 1 863 178 0 97 chr10 66423816 66424136 -79165152 + AluJo SINE Alu 1 289 -23 804 156 0 0 chr10 66424427 66424549 -79164739 + AluSg/x SINE Alu 176 297 -13 221 244 293 16 chr10 66424827 66424950 -79164338 + MIR SINE MIR 50 206 -56 738 210 48 89 chr10 66425156 66425470 -79163818 - AluSx SINE Alu 0 312 12 229 289 40 13 chr10 66425641 66425717 -79163571 + L2 LINE L2 3236 3313 0 562 216 144 6 chr10 66426119 66426286 -79163002 - MER3 DNA MER1_type 0 209 20 573 240 46 29 chr10 66427278 66427453 -79161835 + MER5B DNA MER1_type 1 178 0 308 203 78 109 chr10 66427491 66427619 -79161669 + MIR3 SINE MIR 84 207 -1 1235 92 0 58 chr10 66427768 66427942 -79161346 + AluSp SINE Alu 130 293 -20 715 258 0 0 chr10 66427946 66428105 -79161183 + FRAM SINE Alu 2 160 -6 673 318 42 8 chr10 66428632 66429009 -79160279 - L1M4 LINE L1 -2413 3733 3344 229 281 152 5 chr10 66429169 66429379 -79159909 - L1M4 LINE L1 -3680 2466 2226 2166 122 0 3 chr10 66429466 66429770 -79159518 - AluSc SINE Alu -1 308 6 1555 143 0 8 chr10 66430095 66430340 -79158948 + AluJo SINE Alu 68 310 -2 1693 152 0 51 chr10 66432088 66432403 -79156885 - AluSg SINE Alu -1 309 11 1066 258 168 5 chr10 66432609 66433044 -79156244 + LTR33 LTR ERVL 15 520 -1 1991 140 40 12 chr10 66434141 66434469 -79154819 - MER1B DNA MER1_type 0 337 1 192 271 34 0 chr10 66434818 66434877 -79154411 - MIR SINE MIR 0 262 202 2341 79 16 16 chr10 66435614 66435917 -79153371 + AluY SINE Alu 1 303 -8 1483 219 73 6 chr10 66436441 66436783 -79152505 - MLT1A1 LTR MaLR 0 365 1 275 193 202 50 chr10 66436783 66436902 -79152386 - MLT1E2 LTR MaLR -489 137 1 22 0 0 0 chr10 66437028 66437050 -79152238 + AT_rich Low_complexity Low_complexity 1 22 0 1991 127 4 0 chr10 66437345 66437620 -79151668 + AluSx SINE Alu 4 279 -33 633 191 7 64 chr10 66441655 66441796 -79147492 + FLAM_A SINE Alu 1 133 0 194 216 49 78 chr10 66443844 66443946 -79145342 - L2 LINE L2 -388 2926 2828 548 243 32 65 chr10 66444928 66445113 -79144175 + AluJo SINE Alu 122 300 -12 28 61 0 0 chr10 66447757 66447806 -79141482 + AT_rich Low_complexity Low_complexity 1 49 0 1323 119 55 0 chr10 66448085 66448287 -79141001 - AluSg/x SINE Alu 0 312 100 1675 119 4 0 chr10 66448437 66448664 -79140624 - AluSc SINE Alu -76 233 6 205 313 16 0 chr10 66448675 66448739 -79140549 - MER5A DNA MER1_type -124 65 1 1789 183 53 15 chr10 66449127 66449525 -79139763 - MER31A LTR ERV1 -72 413 1 1849 157 4 0 chr10 66451011 66451279 -79138009 - AluJb SINE Alu -30 282 14 1112 203 5 0 chr10 66451571 66451778 -79137510 - AluSx SINE Alu -104 208 1 34 24 0 0 chr10 66452174 66452215 -79137073 + AT_rich Low_complexity Low_complexity 1 41 0 447 93 0 111 chr10 66452623 66452731 -79136557 - AluSg/x SINE Alu -17 292 197 417 141 78 0 chr10 66453421 66453485 -79135803 + AluSp SINE Alu 54 122 -191 392 282 110 66 chr10 66454229 66454548 -79134740 - L2 LINE L2 -348 2966 2634 252 329 14 0 chr10 66454767 66454840 -79134448 - MIR SINE MIR -116 146 73 2211 130 0 3 chr10 66456232 66456540 -79132748 - AluSx SINE Alu -5 307 1 2559 72 27 0 chr10 66456751 66457086 -79132202 + LTR14A LTR ERVK 1 344 0 183 80 0 0 chr10 66457849 66457874 -79131414 + (GGGA)n Simple_repeat Simple_repeat 4 28 0 1036 50 0 0 chr10 66458095 66458214 -79131074 + AluY SINE Alu 1 119 -192 669 76 0 0 chr10 66459519 66459611 -79129677 + (TCCA)n Simple_repeat Simple_repeat 3 94 0 292 284 203 30 chr10 66459929 66460126 -79129162 - MIR SINE MIR -30 232 2 22 0 0 0 chr10 66461724 66461746 -79127542 + GC_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr10 66462316 66462340 -79126948 + AT_rich Low_complexity Low_complexity 1 24 0 30 59 0 0 chr10 66462536 66462587 -79126701 + GC_rich Low_complexity Low_complexity 1 51 0 494 317 26 30 chr10 66463391 66463627 -79125661 + MIR SINE MIR 3 242 -20 211 355 97 16 chr10 66464343 66464467 -79124821 + L2 LINE L2 3122 3255 -17 218 375 51 0 chr10 66464835 66464969 -79124319 + MIR3 SINE MIR 8 152 -68 349 309 199 22 chr10 66465964 66466145 -79123143 - MIR SINE MIR -5 257 45 240 300 0 0 chr10 66466253 66466323 -79122965 + AluSp SINE Alu 122 191 -112 * 369 125 0 47 chr10 66466304 66466368 -79122920 + FLAM_A SINE Alu 69 129 -4 275 207 52 67 chr10 66466783 66466968 -79122320 + MIR SINE MIR 10 260 -2 294 189 63 53 chr10 66466979 66467074 -79122214 + MER103 DNA DNA 70 165 -1 2170 136 0 13 chr10 66467174 66467484 -79121804 - AluJb SINE Alu -6 306 1 2162 107 3 10 chr10 66467565 66467863 -79121425 - AluSq SINE Alu -17 296 1 546 238 8 0 chr10 66468066 66468188 -79121100 + L1M4 LINE L1 3568 3690 -2456 * 612 173 134 45 chr10 66468180 66468359 -79120929 + L1M4 LINE L1 4368 4562 -1584 911 143 21 0 chr10 66468365 66468505 -79120783 + AluJo SINE Alu 7 149 -163 411 315 42 28 chr10 66469238 66469451 -79119837 + MIR SINE MIR 33 248 -14 366 273 64 0 chr10 66469635 66469745 -79119543 + MIR SINE MIR 16 132 -76 335 190 63 13 chr10 66470310 66470389 -79118899 - MER53 DNA DNA -4 185 103 275 308 85 30 chr10 66470931 66471065 -79118223 + MIR SINE MIR 10 149 -62 191 220 102 0 chr10 66471480 66471539 -79117749 - MIR SINE MIR -119 143 79 26 0 0 0 chr10 66471991 66472017 -79117271 + AT_rich Low_complexity Low_complexity 1 26 0 2547 189 19 2 chr10 66472087 66472548 -79116740 - L1PA16 LINE L1 -10 6156 5688 11439 225 21 19 chr10 66472548 66475669 -79113619 - L1PA15-16 LINE L1 -976 5873 2747 1832 125 14 0 chr10 66476524 66476805 -79112483 + AluJb SINE Alu 11 295 -17 1932 127 25 32 chr10 66477422 66477736 -79111552 + AluSx SINE Alu 1 312 0 1928 85 122 4 chr10 66477759 66478029 -79111259 + AluSp SINE Alu 1 302 -11 404 194 9 65 chr10 66478034 66478142 -79111146 + L1M3 LINE L1 4282 4383 -1763 247 67 0 0 chr10 66478142 66478193 -79111095 + AluSp/q SINE Alu 256 306 0 1453 142 12 149 chr10 66478239 66478405 -79110883 + THE1B LTR MaLR 1 78 -286 2027 162 0 0 chr10 66478405 66478708 -79110580 - AluSx SINE Alu -9 303 1 1453 142 12 149 chr10 66478708 66478956 -79110332 + THE1B LTR MaLR 78 358 -6 384 276 188 16 chr10 66478992 66479184 -79110104 + MIR SINE MIR 35 259 -3 1365 105 6 0 chr10 66479454 66479635 -79109653 + AluSp SINE Alu 121 302 -11 639 195 0 114 chr10 66479672 66479882 -79109406 + L1M3 LINE L1 5256 5441 -727 294 0 0 61 chr10 66481066 66481115 -79108173 + (TG)n Simple_repeat Simple_repeat 2 47 0 423 0 0 0 chr10 66481741 66481788 -79107500 + (TG)n Simple_repeat Simple_repeat 2 48 0 234 309 36 9 chr10 66481825 66481935 -79107353 - 5S rRNA rRNA -2 119 7 423 303 15 8 chr10 66482202 66482334 -79106954 - L1MC1 LINE L1 0 6333 6201 1545 199 25 39 chr10 66482334 66482695 -79106593 - MER93b LTR ERV1 -17 356 1 1175 176 8 65 chr10 66482716 66482978 -79106310 - AluJb SINE Alu -45 267 21 187 320 114 44 chr10 66483091 66483432 -79105856 - L2 LINE L2 -1863 1451 1087 377 298 16 0 chr10 66483917 66484038 -79105250 - L1P LINE L1 -729 5427 5305 319 272 38 81 chr10 66484061 66484249 -79105039 - L1M4 LINE L1 -916 5230 5054 1487 149 137 57 chr10 66484249 66484551 -79104737 + MLT1A1 LTR MaLR 1 334 -31 2147 128 0 0 chr10 66484551 66484848 -79104440 - AluSx SINE Alu -15 297 1 1487 149 137 57 chr10 66484848 66484881 -79104407 + MLT1A1 LTR MaLR 334 363 -2 319 272 38 81 chr10 66484881 66484953 -79104335 - L1M4 LINE L1 -1092 5054 4981 2548 71 0 0 chr10 66485053 66485364 -79103924 - AluY SINE Alu 0 311 1 2205 260 76 34 chr10 66485367 66486344 -79102944 + L1ME3A LINE L1 4110 5127 -1019 1275 238 51 11 chr10 66486355 66486791 -79102497 + L1ME3A LINE L1 5236 5689 -473 2130 185 11 3 chr10 66486795 66487174 -79102114 - MER89 LTR ERV1 0 559 178 325 175 0 0 chr10 66487185 66487242 -79102046 - MER89 LTR ERV1 -494 65 9 1829 212 45 25 chr10 66487271 66487720 -79101568 + L1ME3A LINE L1 5713 6170 0 271 253 0 38 chr10 66488288 66488367 -79100921 - L2 LINE L2 0 3313 3238 * 617 377 0 0 chr10 66488363 66488620 -79100668 + MIR SINE MIR 6 262 0 2033 135 156 13 chr10 66488638 66489016 -79100272 + MSTB1 LTR MaLR 1 432 0 2082 121 7 3 chr10 66489135 66489425 -79099863 - AluSx SINE Alu -21 291 1 312 315 126 14 chr10 66489471 66489614 -79099674 - MIR3 SINE MIR -27 181 23 186 143 20 82 chr10 66489955 66490004 -79099284 + L2 LINE L2 3268 3313 0 308 327 0 9 chr10 66490639 66490746 -79098542 + CT-rich Low_complexity Low_complexity 1 106 0 415 261 146 18 chr10 66490924 66491089 -79098199 - MER5A DNA MER1_type -3 186 1 338 254 0 0 chr10 66491163 66491226 -79098062 - L2 LINE L2 -8 3264 3202 482 65 0 135 chr10 66491264 66491464 -79097824 + (TA)n Simple_repeat Simple_repeat 2 174 0 463 68 0 135 chr10 66491480 66491687 -79097601 + (TA)n Simple_repeat Simple_repeat 2 180 0 577 46 0 103 chr10 66491735 66491929 -79097359 + (TA)n Simple_repeat Simple_repeat 2 175 0 511 70 2 104 chr10 66491969 66492516 -79096772 + (TA)n Simple_repeat Simple_repeat 1 491 0 706 43 0 97 chr10 66492545 66492855 -79096433 + (TA)n Simple_repeat Simple_repeat 1 280 0 292 361 98 8 chr10 66492918 66493040 -79096248 + MIR SINE MIR 1 134 -74 374 246 31 11 chr10 66493058 66493178 -79096110 + MIR SINE MIR 24 151 -57 675 291 169 69 chr10 66493190 66493568 -79095720 - L2 LINE L2 0 3272 2857 188 135 81 0 chr10 66493573 66493610 -79095678 + MIR SINE MIR 158 197 -65 23 33 0 0 chr10 66493723 66493753 -79095535 + AT_rich Low_complexity Low_complexity 1 30 0 2272 84 23 0 chr10 66493854 66494153 -79095135 + AluSx SINE Alu 1 306 -6 409 276 158 0 chr10 66494585 66494737 -79094551 - MIR SINE MIR -67 195 20 234 0 0 0 chr10 66495042 66495068 -79094220 + (A)n Simple_repeat Simple_repeat 1 26 0 319 281 104 111 chr10 66495598 66496157 -79093131 - L1M2 LINE L1 -5790 1059 505 286 294 111 0 chr10 66497210 66497322 -79091966 + MIR SINE MIR 42 164 -58 538 253 165 0 chr10 66497336 66497518 -79091770 - MER58A DNA MER1_type -1 223 12 539 281 57 60 chr10 66500104 66500489 -79088799 - L1ME4a LINE L1 -95 6026 5643 2146 130 0 3 chr10 66500498 66500797 -79088491 - AluSx SINE Alu -14 298 1 1980 164 126 15 chr10 66501668 66502058 -79087230 + Tigger2a DNA MER2_type 1 433 -1 483 322 27 7 chr10 66502793 66502939 -79086349 - MIR3 SINE MIR -57 151 3 335 412 71 12 chr10 66503387 66503642 -79085646 - L2 LINE L2 -13 3259 2990 185 284 0 99 chr10 66504425 66504506 -79084782 - L2 LINE L2 -3240 74 2 361 349 35 58 chr10 66504622 66504969 -79084319 - L2 LINE L2 -1 3271 2933 22 0 0 0 chr10 66505581 66505603 -79083685 + AT_rich Low_complexity Low_complexity 1 22 0 2176 154 61 5 chr10 66505908 66506316 -79082972 - Charlie1 DNA MER1_type -171 2590 2160 31 58 0 0 chr10 66506825 66506877 -79082411 + AT_rich Low_complexity Low_complexity 1 52 0 402 243 9 28 chr10 66507057 66507164 -79082124 + L1ME4a LINE L1 5955 6059 -62 304 248 40 50 chr10 66507166 66507267 -79082021 - L2 LINE L2 -3 3310 3211 229 253 61 30 chr10 66508829 66508928 -79080360 + HAL1b LINE L1 1237 1338 -10 767 288 92 52 chr10 66509246 66509820 -79079468 + L2 LINE L2 2627 3313 0 22 35 0 0 chr10 66510300 66510329 -79078959 + AT_rich Low_complexity Low_complexity 1 29 0 180 238 48 32 chr10 66510466 66510529 -79078759 - L3b LINE CR1 -263 1320 1257 230 198 0 74 chr10 66511101 66511182 -79078106 + GA-rich Low_complexity Low_complexity 2 76 0 286 236 142 17 chr10 66511584 66511700 -79077588 + MIR3 SINE MIR 41 170 -38 3787 118 41 20 chr10 66512089 66512722 -79076566 - Tigger3b DNA MER2_type 0 1232 587 6356 118 16 27 chr10 66512722 66514076 -79075212 - L1PB1 LINE L1 -16 6135 4798 2303 70 3 3 chr10 66514076 66514404 -79074884 - AluSx SINE Alu 0 328 1 6356 118 16 27 chr10 66514404 66514427 -79074861 - L1PB1 LINE L1 -1353 4798 4776 3256 146 78 20 chr10 66514431 66515034 -79074254 - Tigger3b DNA MER2_type -593 638 1 230 222 0 25 chr10 66515058 66515139 -79074149 + (CATATA)n Simple_repeat Simple_repeat 2 80 0 1447 161 8 8 chr10 66515539 66515775 -79073513 - MER46A DNA MER2_type 0 236 1 1180 156 41 70 chr10 66516783 66516819 -79072469 + MER46A DNA MER2_type 1 37 -2694 2011 87 26 62 chr10 66516819 66517128 -79072160 - AluSq SINE Alu -15 298 1 1180 156 41 70 chr10 66517128 66517334 -79071954 + MER46A DNA MER2_type 37 236 0 467 291 50 33 chr10 66517739 66517921 -79071367 + MIR SINE MIR 3 187 -75 1088 95 7 0 chr10 66519369 66519516 -79069772 - L1PB2 LINE L1 -3 6148 6001 2844 78 0 3 chr10 66519513 66519885 -79069403 + L1PB2 LINE L1 5588 5958 -193 312 263 29 46 chr10 66520665 66520784 -79068504 + MIR SINE MIR 38 154 -68 598 115 0 0 chr10 66522621 66522708 -79066580 + AluSp/q SINE Alu 220 306 -7 3307 220 11 31 chr10 66522719 66523568 -79065720 + L1PA13 LINE L1 231 1062 -5725 1254 153 0 71 chr10 66524928 66525182 -79064106 - MER46A DNA MER2_type 0 236 1 318 182 15 0 chr10 66526769 66526835 -79062453 + L1ME2 LINE L1 6076 6142 -22 213 234 0 0 chr10 66527086 66527150 -79062138 + C-rich Low_complexity Low_complexity 1 64 0 419 221 21 43 chr10 66527281 66527421 -79061867 + LTR23 LTR ERV1 301 437 0 296 232 24 24 chr10 66527423 66527505 -79061783 - MIR SINE MIR -108 154 73 580 279 52 33 chr10 66527836 66528108 -79061180 + MER34 LTR ERV1 1 277 -265 248 243 122 28 chr10 66528193 66528300 -79060988 - LTR54B LTR ERV1 -208 290 174 383 215 74 107 chr10 66528776 66528925 -79060363 - L1MC4a LINE L1 -1751 6057 5914 183 372 80 29 chr10 66528992 66529129 -79060159 + MIR3 SINE MIR 35 178 -30 1134 312 45 37 chr10 66529468 66530116 -79059172 - ERVL LTR ERVL -2563 3201 2549 816 334 45 16 chr10 66530154 66530819 -79058469 - ERVL LTR ERVL -2829 2167 1734 1097 145 5 39 chr10 66531036 66531243 -79058045 + AluJb SINE Alu 110 309 -3 284 329 27 10 chr10 66531846 66532144 -79057144 + L1M4 LINE L1 3752 4054 -2092 307 274 103 34 chr10 66532146 66532292 -79056996 + L1M4 LINE L1 5047 5202 -944 489 163 11 11 chr10 66532294 66532386 -79056902 + LTR56 LTR ERV1 92 183 -262 183 80 0 0 chr10 66532619 66532644 -79056644 + (TA)n Simple_repeat Simple_repeat 2 26 0 28 48 0 0 chr10 66532652 66532694 -79056594 + AT_rich Low_complexity Low_complexity 1 42 0 2182 148 46 44 chr10 66534487 66534872 -79054416 - Tigger2a DNA MER2_type -2274 434 46 2601 45 0 13 chr10 66534872 66535186 -79054102 + AluY SINE Alu 2 311 0 2182 148 46 44 chr10 66535186 66535233 -79054055 - Tigger2a DNA MER2_type -2662 46 1 558 299 112 0 chr10 66535769 66535966 -79053322 + L3 LINE CR1 1230 1448 -129 392 224 13 0 chr10 66536120 66536196 -79053092 - Tigger2 DNA MER2_type -1 2717 2641 558 300 80 73 chr10 66537596 66538049 -79051239 + L2 LINE L2 2809 3264 -8 2770 176 75 0 chr10 66538619 66539070 -79050218 + LTR26 LTR ERV1 1 503 -100 288 0 0 0 chr10 66539070 66539102 -79050186 + (TCTCC)n Simple_repeat Simple_repeat 4 35 0 2770 176 75 0 chr10 66539102 66539206 -79050082 + LTR26 LTR ERV1 503 598 -5 347 269 0 21 chr10 66539284 66539377 -79049911 - MER117 DNA MER1_type -40 157 67 419 213 9 28 chr10 66539407 66539515 -79049773 + MLT1E2 LTR MaLR 521 626 0 183 196 39 20 chr10 66539623 66539674 -79049614 + MIR SINE MIR 113 164 -98 447 286 173 0 chr10 66539939 66540107 -79049181 + MIR SINE MIR 63 259 -3 831 270 153 63 chr10 66540459 66540967 -79048321 + LTR67 LTR ERVL 2 555 -2 238 239 94 36 chr10 66541541 66541679 -79047609 + L2 LINE L2 3098 3243 -70 2972 77 48 0 chr10 66541885 66542300 -79046988 - L1PA10 LINE L1 -16 6152 5718 4285 128 2 4 chr10 66542305 66543288 -79046000 - L1PA10 LINE L1 -546 5622 4641 942 186 0 0 chr10 66543282 66543481 -79045807 + L1P LINE L1 2929 3127 -3019 * 5581 132 20 0 chr10 66543457 66544390 -79044898 + L1P LINE L1 3661 4612 -1534 228 258 15 30 chr10 66544629 66544695 -79044593 + MER5B DNA MER1_type 114 178 0 423 189 33 33 chr10 66544782 66544904 -79044384 + MER103 DNA DNA 45 166 0 460 243 39 10 chr10 66545114 66545217 -79044071 + MER5A DNA MER1_type 7 112 -77 896 166 51 98 chr10 66545706 66545941 -79043347 - AluJo SINE Alu -19 293 70 834 174 12 6 chr10 66546239 66546400 -79042888 + MER105 DNA DNA 1 162 -42 265 324 76 55 chr10 66546459 66546604 -79042684 - MER5B DNA MER1_type -30 148 1 332 349 32 5 chr10 66547016 66547205 -79042083 + L1M4 LINE L1 4975 5168 -978 1089 291 81 21 chr10 66547452 66547833 -79041455 + L2 LINE L2 2910 3313 0 284 310 82 13 chr10 66548109 66548267 -79041021 + L2 LINE L2 2602 2770 -544 1076 233 61 61 chr10 66548410 66548887 -79040401 - MER74B LTR ERVL -56 566 90 910 129 23 4 chr10 66548899 66549118 -79040170 + Tigger3(Golem) DNA MER2_type 18 324 -2705 1991 163 30 0 chr10 66549118 66549455 -79039833 + MER7A DNA MER2_type 1 345 -1 2621 95 8 16 chr10 66550183 66550561 -79038727 + THE1C LTR MaLR 1 375 0 678 244 28 60 chr10 66550747 66550964 -79038324 + MER63A DNA MER1_type 1 210 0 199 356 44 52 chr10 66551658 66551793 -79037495 - MIR SINE MIR -99 163 30 294 291 114 18 chr10 66551954 66552174 -79037114 - L1ME LINE L1 -323 5798 5558 1715 26 0 0 chr10 66552193 66552382 -79036906 - AluY SINE Alu -106 205 17 249 244 81 32 chr10 66553278 66553401 -79035887 - L1MC4a LINE L1 -1881 5927 5799 180 0 0 0 chr10 66553758 66553778 -79035510 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 312 301 98 7 chr10 66553878 66554021 -79035267 + MIR3 SINE MIR 44 199 -9 182 293 26 69 chr10 66555871 66555947 -79033341 + MIR3 SINE MIR 81 152 -56 353 261 39 56 chr10 66555947 66556127 -79033161 - MER5B DNA MER1_type -1 177 1 182 293 26 69 chr10 66556127 66556166 -79033122 + MIR3 SINE MIR 152 191 -17 514 278 57 21 chr10 66556820 66557014 -79032274 - L2 LINE L2 0 3313 3113 323 248 43 81 chr10 66558690 66558851 -79030437 + MIR SINE MIR 78 232 -30 201 301 164 0 chr10 66559994 66560067 -79029221 - L2 LINE L2 0 3272 3188 2150 131 3 0 chr10 66560100 66560406 -79028882 - AluSx SINE Alu -5 307 1 338 258 60 26 chr10 66561617 66561768 -79027520 + MLT1L LTR MaLR 460 615 0 181 333 0 0 chr10 66561820 66561874 -79027414 + L2 LINE L2 3246 3299 -14 279 0 0 0 chr10 66562091 66562122 -79027166 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1320 75 14 61 chr10 66562151 66562365 -79026923 - L1PA14 LINE L1 0 6161 5958 310 290 84 23 chr10 66562592 66562723 -79026565 + MER5A DNA MER1_type 2 140 -49 223 333 77 0 chr10 66562727 66562805 -79026483 + L2 LINE L2 3189 3272 0 795 285 48 9 chr10 66562964 66563192 -79026096 - MIR SINE MIR -17 245 9 392 298 53 0 chr10 66563301 66563415 -79025873 - MIR3 SINE MIR -7 201 82 228 341 110 11 chr10 66565050 66565141 -79024147 - L2 LINE L2 -5 3267 3168 217 300 111 22 chr10 66565131 66565221 -79024067 - L3 LINE CR1 -199 1378 1281 * 213 329 0 27 chr10 66565261 66565334 -79023954 - L3 LINE CR1 -426 1151 1081 617 286 158 57 chr10 66566076 66566571 -79022717 + LTR33 LTR ERVL 3 516 -7 221 56 0 28 chr10 66566679 66566715 -79022573 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 5542 30 0 0 chr10 66566715 66567388 -79021900 - L1PA3 LINE L1 -24 6131 5459 215 221 29 44 chr10 66567423 66567491 -79021797 - MER5B DNA MER1_type -8 170 104 210 309 82 45 chr10 66567438 66567548 -79021740 + MER5A DNA MER1_type 36 149 -40 * 329 183 12 24 chr10 66567567 66567649 -79021639 + L1MC5 LINE L1 7833 7913 -48 795 306 0 0 chr10 66568214 66568423 -79020865 + MIR SINE MIR 48 256 -6 232 251 74 79 chr10 66569862 66570077 -79019211 - L1MC4 LINE L1 -1 8041 7828 318 182 15 0 chr10 66570131 66570197 -79019091 - L1ME2 LINE L1 -22 6142 6076 361 237 86 71 chr10 66571199 66571397 -79017891 + L1ME3A LINE L1 5962 6162 -8 835 139 8 31 chr10 66571908 66572037 -79017251 + FLAM_C SINE Alu 2 127 -16 533 266 68 23 chr10 66572146 66572323 -79016965 - MIR SINE MIR 0 262 78 710 188 0 8 chr10 66572340 66572457 -79016831 + MER45A DNA AcHobo 53 168 -10 210 164 27 55 chr10 66572554 66572627 -79016661 + (CAAA)n Simple_repeat Simple_repeat 3 73 0 22 0 0 0 chr10 66573835 66573857 -79015431 + AT_rich Low_complexity Low_complexity 1 22 0 225 311 40 0 chr10 66573919 66573993 -79015295 - MIR SINE MIR -99 163 87 24 0 0 0 chr10 66574908 66574932 -79014356 + AT_rich Low_complexity Low_complexity 1 24 0 3399 167 14 14 chr10 66575054 66575648 -79013640 - L1PB4 LINE L1 -7 6149 5556 448 258 58 19 chr10 66575665 66575820 -79013468 + L1ME4a LINE L1 5651 5811 -310 386 278 9 17 chr10 66575848 66575963 -79013325 + MIR SINE MIR 16 129 -133 440 242 83 33 chr10 66576238 66576358 -79012930 + MER119 DNA MER1_type 7 132 -451 * 489 214 95 16 chr10 66576355 66576481 -79012807 + MER119 DNA MER1_type 447 582 -1 314 220 98 45 chr10 66576493 66576625 -79012663 + L1ME4a LINE L1 5980 6118 -3 363 262 36 48 chr10 66577042 66577210 -79012078 - L2 LINE L2 -555 2759 2594 453 179 57 9 chr10 66577335 66577441 -79011847 - L1ME4a LINE L1 0 6121 6011 223 202 21 32 chr10 66577446 66577540 -79011748 + (TA)n Simple_repeat Simple_repeat 2 94 0 730 268 13 48 chr10 66577609 66577840 -79011448 - MIR SINE MIR -16 246 24 870 202 53 48 chr10 66577933 66578141 -79011147 + MER3 DNA MER1_type 1 209 0 254 254 82 9 chr10 66578244 66578354 -79010934 - HAL1 LINE L1 -168 2339 2222 549 266 129 49 chr10 66578409 66578695 -79010593 - MLT1K LTR MaLR -1 587 279 216 158 0 0 chr10 66578738 66578776 -79010512 + (CA)n Simple_repeat Simple_repeat 2 39 0 426 267 105 118 chr10 66578776 66579231 -79010057 - MLT1H LTR MaLR -38 511 27 294 299 66 62 chr10 66579275 66579486 -79009802 - MLT1K LTR MaLR -367 221 10 279 0 0 0 chr10 66580384 66580415 -79008873 + (CA)n Simple_repeat Simple_repeat 2 32 0 26 0 0 0 chr10 66580604 66580630 -79008658 + AT_rich Low_complexity Low_complexity 1 26 0 2169 132 21 15 chr10 66582201 66582534 -79006754 - MER44D DNA MER2_type -4 605 1 287 247 59 12 chr10 66582753 66582838 -79006450 - MER102a DNA MER1_type 0 330 242 308 248 107 27 chr10 66583581 66583730 -79005558 + L1MEc LINE L1 1307 1467 -4929 208 188 21 62 chr10 66583970 66584018 -79005270 - MER5A DNA MER1_type 0 189 144 578 284 72 0 chr10 66586247 66586441 -79002847 + L2 LINE L2 3106 3313 0 201 74 0 0 chr10 66586745 66586772 -79002516 + (ATGGTG)n Simple_repeat Simple_repeat 1 27 0 4702 193 112 121 chr10 66586772 66588530 -79000758 + MER52A LTR ERV1 15 1755 0 1267 174 0 0 chr10 66588724 66588914 -79000374 - AluJb SINE Alu -18 294 105 26 30 0 0 chr10 66589057 66589090 -79000198 + AT_rich Low_complexity Low_complexity 1 33 0 255 286 20 10 chr10 66590170 66590242 -78999046 + (TATG)n Simple_repeat Simple_repeat 2 77 -23 9236 106 19 6 chr10 66590242 66591522 -78997766 + HSMAR2 DNA Mariner 2 1298 -4 255 286 20 10 chr10 66591522 66591547 -78997741 + (TATG)n Simple_repeat Simple_repeat 77 100 0 25 0 0 0 chr10 66591583 66591608 -78997680 + AT_rich Low_complexity Low_complexity 1 25 0 709 274 28 0 chr10 66591625 66591804 -78997484 - MIR SINE MIR -26 236 53 283 221 147 42 chr10 66591827 66592017 -78997271 - L1ME LINE L1 -242 5879 5670 906 277 165 12 chr10 66592019 66592438 -78996850 - LTR16C LTR ERVL -8 483 1 232 181 111 28 chr10 66592503 66592575 -78996713 - L1ME LINE L1 -525 5596 5519 21 57 0 0 chr10 66592657 66592692 -78996596 + AT_rich Low_complexity Low_complexity 1 35 0 2468 80 0 0 chr10 66593001 66593301 -78995987 + AluY SINE Alu 1 300 -11 22 80 0 0 chr10 66593479 66593529 -78995759 + AT_rich Low_complexity Low_complexity 1 50 0 1448 219 147 24 chr10 66594238 66594654 -78994634 + MLT1C LTR MaLR 1 467 0 803 271 53 16 chr10 66595378 66595625 -78993663 + MIR SINE MIR 7 262 0 1004 266 48 63 chr10 66595658 66596135 -78993153 - MLT1L LTR MaLR 0 615 146 432 284 71 33 chr10 66596484 66596695 -78992593 + L2 LINE L2 2155 2373 -941 772 188 62 14 chr10 66597200 66597344 -78991944 + FAM SINE Alu 8 158 -27 186 71 0 0 chr10 66597344 66597372 -78991916 + (TAAAA)n Simple_repeat Simple_repeat 3 30 0 273 264 82 45 chr10 66598947 66599057 -78990231 - L2 LINE L2 -21 3251 3138 281 286 31 10 chr10 66599175 66599273 -78990015 + HAL1 LINE L1 1363 1462 -1045 1144 274 85 19 chr10 66599504 66599880 -78989408 - MLT1I LTR MaLR -8 401 1 2373 84 0 3 chr10 66600483 66600791 -78988497 - AluY SINE Alu -4 307 1 504 248 60 0 chr10 66601431 66601548 -78987740 + MER94 DNA DNA 4 127 -7 280 286 13 0 chr10 66601888 66601965 -78987323 - L2 LINE L2 -1 3271 3194 2147 130 3 3 chr10 66603138 66603445 -78985843 - AluSx SINE Alu -5 307 1 217 337 58 12 chr10 66604147 66604233 -78985055 + MIR SINE MIR 29 118 -144 246 299 126 55 chr10 66605318 66605445 -78983843 - L2 LINE L2 0 3272 3137 188 338 15 98 chr10 66605655 66605788 -78983500 - MIR SINE MIR -113 149 28 2779 95 19 6 chr10 66606226 66606585 -78982703 - THE1B LTR MaLR 0 364 1 421 282 78 84 chr10 66606690 66607170 -78982118 + L1MC4a LINE L1 2417 2895 -3251 2070 99 37 0 chr10 66607170 66607475 -78981813 + AluSg SINE Alu 1 315 0 421 282 78 84 chr10 66607475 66607599 -78981689 + L1MC4a LINE L1 2895 3018 -3128 26 30 0 0 chr10 66607641 66607674 -78981614 + AT_rich Low_complexity Low_complexity 1 33 0 492 294 45 60 chr10 66607679 66607938 -78981350 + L1MC4a LINE L1 4644 4892 -1254 2546 136 18 67 chr10 66607938 66608339 -78980949 + MSTA LTR MaLR 1 379 -49 2026 101 11 14 chr10 66608339 66608617 -78980671 - AluSx SINE Alu -35 277 1 2546 136 18 67 chr10 66608617 66608665 -78980623 + MSTA LTR MaLR 379 428 0 492 294 45 60 chr10 66608665 66608936 -78980352 + L1MC4a LINE L1 4892 5166 -980 814 253 25 8 chr10 66609115 66609356 -78979932 + L1MD2 LINE L1 6113 6357 -2 * 870 280 104 48 chr10 66609350 66609908 -78979380 + L1MC4a LINE L1 5374 5962 -208 2127 118 0 22 chr10 66610097 66610411 -78978877 - AluSx SINE Alu -5 307 1 2956 256 78 47 chr10 66610788 66612137 -78977151 - L2 LINE L2 0 3313 1922 1262 158 77 37 chr10 66612316 66612562 -78976726 - AluJo SINE Alu -51 261 6 272 309 73 21 chr10 66612600 66612940 -78976348 + L1MC4 LINE L1 4288 4645 -1501 980 273 62 70 chr10 66612994 66613477 -78975811 + L1MC4 LINE L1 5174 5110 -1036 222 37 0 0 chr10 66613477 66613504 -78975784 + (TA)n Simple_repeat Simple_repeat 2 28 0 980 273 62 70 chr10 66613504 66613797 -78975491 + L1MC4 LINE L1 5109 5403 -743 1237 202 73 0 chr10 66615837 66615950 -78973338 + AluJo SINE Alu 1 104 -208 219 69 0 0 chr10 66615950 66615979 -78973309 + (CAA)n Simple_repeat Simple_repeat 2 30 0 1237 202 73 0 chr10 66615979 66616113 -78973175 + AluJo SINE Alu 104 266 -46 297 0 0 0 chr10 66616117 66616150 -78973138 + (TC)n Simple_repeat Simple_repeat 2 34 0 312 219 0 0 chr10 66616152 66616216 -78973072 + L1MC4 LINE L1 6640 6703 -1339 265 363 71 8 chr10 66616605 66616645 -78972643 - MIR SINE MIR -60 148 112 2338 64 3 0 chr10 66616645 66616927 -78972361 - L1PA8 LINE L1 -3 6169 5887 265 363 71 8 chr10 66616927 66617050 -78972238 - MIR SINE MIR -96 112 23 693 198 31 31 chr10 66617238 66617400 -78971888 - MER103 DNA DNA -1 165 4 265 149 27 95 chr10 66617665 66617739 -78971549 + MIR3 SINE MIR 112 180 -28 251 312 71 14 chr10 66617805 66617946 -78971342 - L1MC4 LINE L1 -1 8041 7893 886 206 28 9 chr10 66617977 66618191 -78971097 - L1MC4 LINE L1 -136 7906 7689 1967 93 0 4 chr10 66618257 66618516 -78970772 + AluSg SINE Alu 38 295 -15 302 277 179 9 chr10 66619049 66619156 -78970132 + MIR SINE MIR 5 123 -85 1902 161 92 67 chr10 66621548 66622039 -78967249 + MLT1D LTR MaLR 1 503 -2 218 307 117 38 chr10 66622823 66623087 -78966201 + L2 LINE L2 1901 2185 -1129 343 286 68 19 chr10 66623188 66623349 -78965939 + L2 LINE L2 2900 3068 -245 1998 188 37 22 chr10 66623905 66624242 -78965046 - L1MB8 LINE L1 -14 6164 5817 2294 114 0 3 chr10 66624242 66624548 -78964740 - AluSq SINE Alu -8 305 1 1998 188 37 22 chr10 66624548 66624673 -78964615 - L1MB8 LINE L1 -361 5817 5695 241 331 132 29 chr10 66624839 66624975 -78964313 + L2 LINE L2 3117 3266 -6 313 332 162 21 chr10 66625002 66625330 -78963958 + L2 LINE L2 2385 2758 -556 189 0 0 0 chr10 66626237 66626258 -78963030 + (T)n Simple_repeat Simple_repeat 1 21 0 413 313 28 28 chr10 66626750 66626894 -78962394 - MIR SINE MIR -109 153 10 308 95 0 48 chr10 66626905 66626968 -78962320 + (GA)n Simple_repeat Simple_repeat 1 60 0 244 208 67 7 chr10 66630096 66630245 -78959043 + (TA)n Simple_repeat Simple_repeat 2 159 0 206 336 107 0 chr10 66630255 66630377 -78958911 + MIR3 SINE MIR 64 198 -10 1386 164 29 16 chr10 66630691 66631003 -78958285 + MER33 DNA MER1_type 5 320 -4 292 376 20 0 chr10 66632663 66632764 -78956524 - MIR SINE MIR -113 149 47 258 32 0 0 chr10 66633339 66633370 -78955918 + (TTCA)n Simple_repeat Simple_repeat 2 32 0 261 367 58 8 chr10 66634311 66634431 -78954857 + L3b LINE CR1 1390 1515 -68 610 278 6 6 chr10 66635842 66636004 -78953284 + MIR SINE MIR 9 170 -92 228 376 45 22 chr10 66636681 66636859 -78952429 + L2 LINE L2 2872 3053 -219 22 56 0 0 chr10 66637115 66637151 -78952137 + AT_rich Low_complexity Low_complexity 1 36 0 410 312 110 6 chr10 66637380 66637553 -78951735 - MIR SINE MIR -69 193 3 2806 19 0 0 chr10 66637775 66638086 -78951202 - AluYb8 SINE Alu -7 311 1 274 365 105 44 chr10 66638416 66638942 -78950346 + L2 LINE L2 2090 2647 -667 427 299 5 48 chr10 66639112 66639299 -78949989 - MER104 DNA MER2_type -1 179 1 438 306 97 86 chr10 66639310 66639660 -78949628 + L2 LINE L2 2916 3269 -3 227 315 0 0 chr10 66639873 66639927 -78949361 + L2 LINE L2 3250 3303 -10 180 330 77 33 chr10 66640587 66640678 -78948610 - L2 LINE L2 -2440 874 780 1890 185 71 17 chr10 66641235 66641657 -78947631 - MLT1D LTR MaLR -60 445 1 391 294 118 7 chr10 66641657 66641810 -78947478 + MIR SINE MIR 77 246 -16 181 265 88 73 chr10 66642092 66642160 -78947128 - L3 LINE CR1 -113 1464 1396 2404 125 0 21 chr10 66642163 66642540 -78946748 + MSTC LTR MaLR 4 372 -56 191 114 29 0 chr10 66642540 66642575 -78946713 + T-rich Low_complexity Low_complexity 2 37 0 15327 152 51 18 chr10 66642587 66644343 -78944945 - L1PB1 LINE L1 -7 6860 5164 189 0 0 0 chr10 66644343 66644364 -78944924 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 15327 152 51 18 chr10 66644364 66645580 -78943708 - L1PB1 LINE L1 -1703 5164 3990 2119 131 3 16 chr10 66645580 66645894 -78943394 - AluSx SINE Alu -2 310 1 15327 152 51 18 chr10 66645894 66646712 -78942576 - L1PB1 LINE L1 -2877 3990 3201 1967 132 7 0 chr10 66646712 66647031 -78942257 - AluSx SINE Alu 0 321 1 15327 152 51 18 chr10 66647031 66648184 -78941104 - L1PB1 LINE L1 -3666 3201 2088 2592 100 14 6 chr10 66648184 66648545 -78940743 - THE1B LTR MaLR 0 364 1 15327 152 51 18 chr10 66648545 66650209 -78939079 - L1PB1 LINE L1 -4779 2088 1 515 93 0 0 chr10 66650217 66650292 -78938996 + MSTC LTR MaLR 354 428 0 391 292 58 62 chr10 66650292 66650518 -78938770 - L3 LINE CR1 -177 1400 1176 256 294 0 65 chr10 66650693 66650785 -78938503 + L2 LINE L2 2574 2659 -655 293 285 24 49 chr10 66650999 66651122 -78938166 + L1ME LINE L1 328 447 -5949 2136 172 69 5 chr10 66651233 66651639 -78937649 + MSTB1 LTR MaLR 1 432 0 3691 227 80 69 chr10 66652226 66653231 -78936057 + L1ME LINE L1 784 1776 -4630 2257 73 6 19 chr10 66653231 66653546 -78935742 + AluY SINE Alu 1 311 0 3691 227 80 69 chr10 66653546 66655719 -78933569 + L1ME LINE L1 1776 3954 -2452 219 69 0 0 chr10 66655728 66655757 -78933531 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 213 119 0 0 chr10 66655852 66655894 -78933394 + (TA)n Simple_repeat Simple_repeat 2 43 0 1102 171 0 0 chr10 66656115 66656279 -78933009 - FRAM SINE Alu -13 163 1 208 237 34 0 chr10 66657104 66657163 -78932125 + CT-rich Low_complexity Low_complexity 2 62 0 442 200 124 0 chr10 66657310 66657373 -78931915 - MLT1A1 LTR MaLR -202 163 109 1618 172 47 24 chr10 66657373 66657669 -78931619 - AluJb SINE Alu -9 303 1 442 200 124 0 chr10 66657669 66657750 -78931538 - MLT1A1 LTR MaLR -256 109 1 280 400 0 0 chr10 66658578 66658663 -78930625 - L2 LINE L2 -17 3296 3212 741 273 11 62 chr10 66659647 66659922 -78929366 + MIR SINE MIR 1 261 -1 426 252 189 0 chr10 66659917 66660044 -78929244 - MIR3 SINE MIR -45 163 13 * 219 373 32 22 chr10 66660385 66660570 -78928718 - L3 LINE CR1 -17 1560 1374 305 229 0 0 chr10 66661685 66661755 -78927533 - MER69 DNA AcHobo -7 2519 2450 * 559 222 104 0 chr10 66661750 66661885 -78927403 - MER69 DNA AcHobo -2377 149 1 23 0 0 0 chr10 66662075 66662098 -78927190 + AT_rich Low_complexity Low_complexity 1 23 0 521 42 14 0 chr10 66662529 66662601 -78926687 + (GA)n Simple_repeat Simple_repeat 1 73 0 315 0 0 0 chr10 66663636 66663671 -78925617 + (TG)n Simple_repeat Simple_repeat 1 35 0 470 213 29 103 chr10 66663798 66663972 -78925316 + MER5B DNA MER1_type 2 162 -16 296 340 9 9 chr10 66664186 66664292 -78924996 + MIR3 SINE MIR 82 187 -21 288 310 18 31 chr10 66664326 66664458 -78924830 + MIR SINE MIR 62 192 -16 232 219 0 16 chr10 66664514 66664578 -78924710 - MER103 DNA DNA -103 63 1 1024 104 0 0 chr10 66664838 66664973 -78924315 - AluSg/x SINE Alu -15 297 163 645 257 80 27 chr10 66665147 66665382 -78923906 + MIR SINE MIR 12 261 -1 227 196 0 0 chr10 66665474 66665520 -78923768 + Charlie8 DNA MER1_type 221 266 -2151 310 234 135 27 chr10 66665571 66665682 -78923606 + L2 LINE L2 3191 3313 0 1440 157 45 15 chr10 66665862 66666130 -78923158 + AluJb SINE Alu 36 311 -1 2693 212 82 51 chr10 66666131 66666886 -78922402 + L1ME1 LINE L1 4165 4895 -1271 5240 135 43 2 chr10 66666886 66667501 -78921787 + L1PA15 LINE L1 4271 4859 -1306 1631 186 0 43 chr10 66667501 66667841 -78921447 + AluJb SINE Alu 1 327 0 5240 135 43 2 chr10 66667841 66669101 -78920187 + L1PA15 LINE L1 4859 6165 0 2693 212 82 51 chr10 66669101 66669187 -78920101 + L1ME1 LINE L1 4895 4977 -1189 207 0 0 0 chr10 66669187 66669210 -78920078 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 2693 212 82 51 chr10 66669210 66670034 -78919254 + L1ME1 LINE L1 4977 5886 -280 4884 134 28 30 chr10 66670038 66670972 -78918316 + L1MA7 LINE L1 5360 6291 0 2109 116 0 0 chr10 66670979 66671315 -78917973 + AluSx SINE Alu 1 336 0 835 231 115 19 chr10 66671331 66671591 -78917697 + L1MD2 LINE L1 5879 6163 -196 209 238 0 0 chr10 66671591 66671633 -78917655 + (TA)n Simple_repeat Simple_repeat 1 42 0 316 255 28 38 chr10 66671635 66671741 -78917547 + L1MC4 LINE L1 6615 6719 -1323 241 304 13 25 chr10 66671963 66672042 -78917246 - MIR SINE MIR -148 114 37 329 283 258 10 chr10 66672092 66672290 -78916998 + MIR SINE MIR 13 259 -3 333 0 0 0 chr10 66672629 66672666 -78916622 + (TG)n Simple_repeat Simple_repeat 2 38 0 3005 114 2 49 chr10 66672711 66673159 -78916129 + MSTA LTR MaLR 2 428 0 4167 184 29 11 chr10 66674186 66675006 -78914282 + L1MA9 LINE L1 5440 6274 -38 297 280 195 8 chr10 66675856 66675974 -78913314 + MIR SINE MIR 15 154 -108 219 277 79 90 chr10 66676261 66676295 -78912993 - MER5B DNA MER1_type -3 175 142 2350 131 0 37 chr10 66676295 66676645 -78912643 + MER1B DNA MER1_type 1 337 0 219 277 79 90 chr10 66676645 66676787 -78912501 - MER5B DNA MER1_type -36 142 1 308 349 5 58 chr10 66677047 66677236 -78912052 + MIR SINE MIR 28 206 -56 194 222 74 49 chr10 66677830 66677911 -78911377 + L2 LINE L2 3231 3313 0 520 172 71 0 chr10 66678114 66678213 -78911075 - MER103 DNA DNA -1 165 60 2577 136 21 14 chr10 66678257 66678690 -78910598 - L1MA8 LINE L1 -2 6289 5854 232 275 117 23 chr10 66678948 66679119 -78910169 - L1MC4a LINE L1 -1635 6173 5987 1300 159 106 42 chr10 66679557 66679840 -78909448 + AluJo SINE Alu 1 301 -11 1733 111 4 4 chr10 66679842 66680085 -78909203 + AluSq SINE Alu 1 243 -70 746 308 22 4 chr10 66680322 66680549 -78908739 + MIR SINE MIR 2 232 -30 288 125 21 0 chr10 66683556 66683604 -78905684 + MADE1 DNA Mariner 32 80 0 305 378 0 0 chr10 66683965 66684145 -78905143 + G-rich Low_complexity Low_complexity 1 180 0 475 284 59 72 chr10 66685663 66685899 -78903389 - L3 LINE CR1 -77 1500 1268 263 269 194 11 chr10 66687023 66687116 -78902172 - L2 LINE L2 -31 3241 3132 1601 243 133 8 chr10 66687116 66687598 -78901690 - MLT1F LTR MaLR 0 542 1 414 293 75 101 chr10 66687957 66688381 -78900907 + L2 LINE L2 2810 3222 -50 263 161 0 16 chr10 66688405 66688467 -78900821 + GA-rich Low_complexity Low_complexity 4 64 0 1963 181 13 43 chr10 66688566 66688942 -78900346 - MLT1A1 LTR MaLR 0 365 1 1876 118 0 72 chr10 66689449 66689795 -78899493 + AluSx SINE Alu 1 324 0 823 296 117 42 chr10 66689944 66690450 -78898838 + MLT1K LTR MaLR 10 553 -35 201 94 0 0 chr10 66690957 66690989 -78898299 + (CAA)n Simple_repeat Simple_repeat 2 33 0 2271 97 3 0 chr10 66691156 66691446 -78897842 - AluSp SINE Alu -21 292 2 324 162 73 0 chr10 66695169 66695237 -78894051 - MLT1K LTR MaLR 0 588 516 921 295 148 20 chr10 66695481 66696036 -78893252 - L2 LINE L2 0 3313 2698 412 242 11 21 chr10 66696033 66696128 -78893160 - MIR SINE MIR -157 105 12 * 1023 254 62 7 chr10 66697014 66697302 -78891986 - L2 LINE L2 0 3313 3010 209 83 28 0 chr10 66697507 66697543 -78891745 + (TA)n Simple_repeat Simple_repeat 1 37 0 300 320 166 6 chr10 66697643 66697824 -78891464 + MIR SINE MIR 53 262 0 496 288 65 27 chr10 66699063 66699247 -78890041 - MIR SINE MIR -51 211 21 225 222 127 16 chr10 66699869 66699932 -78889356 + MLT1L LTR MaLR 35 104 -511 414 283 108 60 chr10 66699934 66700266 -78889022 + MLT1L LTR MaLR 222 569 -46 558 251 71 16 chr10 66702035 66702218 -78887070 - MER117 DNA MER1_type 0 197 5 853 259 177 5 chr10 66703066 66703433 -78885855 + MLT1K LTR MaLR 157 586 -2 443 291 97 23 chr10 66703448 66703623 -78885665 - MIR SINE MIR -12 250 63 702 239 154 57 chr10 66704169 66704629 -78884659 + LTR33A LTR ERVL 2 506 -17 263 218 333 0 chr10 66706079 66706166 -78883122 + MER91C DNA MER1_type 25 140 0 184 275 0 0 chr10 66708670 66708710 -78880578 - L2 LINE L2 -11 3302 3263 570 309 7 7 chr10 66708719 66708871 -78880417 - MIR SINE MIR -107 155 4 183 254 191 0 chr10 66709412 66709475 -78879813 - L2 LINE L2 -43 3229 3155 646 293 39 61 chr10 66709555 66710013 -78879275 + L1MB7 LINE L1 3884 4331 -1815 3171 199 30 81 chr10 66710201 66711068 -78878220 - L1ME1 LINE L1 -11 6155 5341 2581 14 0 0 chr10 66711068 66711346 -78877942 - AluYa5 SINE Alu -16 295 18 3171 199 30 81 chr10 66711346 66711618 -78877670 - L1ME1 LINE L1 -825 5341 5057 333 182 52 13 chr10 66713093 66713170 -78876118 - MER116 DNA Mariner 0 80 1 205 269 45 30 chr10 66713603 66713670 -78875618 - L2 LINE L2 -1 3312 3245 216 208 0 19 chr10 66714129 66714182 -78875106 + CT-rich Low_complexity Low_complexity 4 55 0 2913 85 3 34 chr10 66714832 66715219 -78874069 + THE1C LTR MaLR 1 375 0 532 133 0 0 chr10 66716056 66716139 -78873149 - L1MB1 LINE L1 0 6168 6086 2022 153 0 10 chr10 66716177 66716491 -78872797 - AluJb SINE Alu -1 311 1 292 300 0 58 chr10 66716794 66716914 -78872374 + GA-rich Low_complexity Low_complexity 2 114 0 628 239 201 0 chr10 66717269 66717453 -78871835 - MER58A DNA MER1_type 0 224 4 208 259 93 0 chr10 66718240 66718294 -78870994 + MER91C DNA MER1_type 52 110 -30 677 192 17 34 chr10 66720468 66720645 -78868643 + MER104 DNA MER2_type 4 177 -3 40 94 0 0 chr10 66720755 66720872 -78868416 + AT_rich Low_complexity Low_complexity 1 117 0 753 73 0 0 chr10 66721109 66721205 -78868083 + L1PA8 LINE L1 6074 6169 -3 3326 225 49 11 chr10 66721274 66722635 -78866653 + L1MB7 LINE L1 4775 6184 0 485 212 10 10 chr10 66723191 66723290 -78865998 - MLT1J2 LTR MaLR 0 450 352 1805 178 20 3 chr10 66723290 66723633 -78865655 - L1M4 LINE L1 -545 5639 5291 1119 160 57 72 chr10 66723633 66724048 -78865240 - MLT1A1 LTR MaLR 0 365 1 1966 220 139 11 chr10 66724048 66724608 -78864680 - L1M4 LINE L1 -851 5295 4664 43197 33 26 3 chr10 66725314 66731323 -78857965 - L1PA2 LINE L1 0 6155 2 353 226 102 81 chr10 66731336 66731522 -78857766 + MIR SINE MIR 73 262 0 334 269 65 0 chr10 66732003 66732096 -78857192 + L2 LINE L2 3215 3313 0 183 290 29 14 chr10 66732306 66732375 -78856913 - MIR SINE MIR -57 151 82 393 323 43 0 chr10 66733764 66733928 -78855360 + MIR SINE MIR 86 256 -6 270 343 52 80 chr10 66734256 66734583 -78854705 - L2 LINE L2 0 3272 2955 2487 86 0 0 chr10 66734887 66735191 -78854097 + AluSc SINE Alu 1 304 -5 423 221 12 98 chr10 66735696 66735859 -78853429 + L1ME LINE L1 5591 5739 -382 296 268 62 0 chr10 66736304 66736401 -78852887 - L2 LINE L2 -18 3295 3193 438 315 73 73 chr10 66736403 66736885 -78852403 + MLT1J LTR MaLR 25 506 -5 221 354 54 25 chr10 66737013 66737253 -78852035 - L2 LINE L2 -218 3054 2808 257 103 132 118 chr10 66737262 66737330 -78851958 + MIR SINE MIR 83 151 -57 336 295 60 46 chr10 66738181 66738398 -78850890 + MIR SINE MIR 40 259 -3 2167 122 3 0 chr10 66739254 66739558 -78849730 + AluSx SINE Alu 1 305 -7 506 284 70 25 chr10 66739819 66740104 -78849184 + AluSq SINE Alu 1 298 -5 497 178 7 89 chr10 66740663 66740798 -78848490 + L2 LINE L2 2731 2854 -460 1576 93 111 57 chr10 66740802 66741082 -78848206 + LTR9 LTR ERV1 1 295 -317 198 0 0 0 chr10 66741532 66741554 -78847734 + (A)n Simple_repeat Simple_repeat 1 22 0 281 156 0 0 chr10 66742554 66742599 -78846689 + MER2 DNA MER2_type 301 345 0 385 208 94 10 chr10 66742642 66742738 -78846550 + L1MC2 LINE L1 6212 6315 -29 416 276 110 7 chr10 66742815 66742960 -78846328 - MIR SINE MIR -53 209 50 280 264 0 56 chr10 66745382 66745454 -78843834 + L2 LINE L2 3246 3313 0 2061 154 3 0 chr10 66745902 66746214 -78843074 + AluSq SINE Alu 1 313 0 1604 77 0 0 chr10 66747166 66747375 -78841913 + L1PA7 LINE L1 5944 6152 -2 207 0 0 0 chr10 66748668 66748691 -78840597 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 462 220 43 14 chr10 66749739 66749880 -78839408 + MER113 DNA MER1_type? 6 150 -371 665 244 52 21 chr10 66749936 66750129 -78839159 + MER113 DNA MER1_type? 269 467 -54 667 237 37 21 chr10 66752477 66752667 -78836621 - L3 LINE CR1 -156 1421 1229 718 100 0 52 chr10 66754365 66754636 -78834652 + AluSx SINE Alu 13 312 0 404 325 41 0 chr10 66754665 66754834 -78834454 - MIR3 SINE MIR 0 208 33 21 57 0 0 chr10 66755306 66755341 -78833947 + GC_rich Low_complexity Low_complexity 1 35 0 427 244 84 66 chr10 66757189 66757402 -78831886 + MIR SINE MIR 10 226 -36 508 273 37 43 chr10 66757545 66757732 -78831556 + MIR SINE MIR 20 205 -57 302 33 7 7 chr10 66757825 66757876 -78831412 + MADE1 DNA Mariner 47 80 0 407 212 23 30 chr10 66758124 66758256 -78831032 + AluSg SINE Alu 10 140 -170 203 307 202 0 chr10 66760076 66760190 -78829098 - MIR SINE MIR -4 258 122 588 261 11 43 chr10 66760327 66760511 -78828777 + MER5B DNA MER1_type 1 178 0 290 321 170 38 chr10 66760618 66760830 -78828458 + MIR SINE MIR 22 261 -1 294 200 218 18 chr10 66763156 66763266 -78826022 - L2 LINE L2 0 3313 3182 288 0 0 0 chr10 66763302 66763334 -78825954 + (TG)n Simple_repeat Simple_repeat 1 32 0 2198 95 0 20 chr10 66763684 66763990 -78825298 + AluSp SINE Alu 1 300 -13 2370 78 0 10 chr10 66764845 66765139 -78824149 + AluY SINE Alu 1 291 -20 521 234 144 12 chr10 66766230 66766397 -78822891 + MIR SINE MIR 3 191 -71 204 40 0 0 chr10 66766668 66766693 -78822595 + (TCTA)n Simple_repeat Simple_repeat 4 28 0 621 286 69 14 chr10 66766902 66767178 -78822110 - L3 LINE CR1 -100 1477 1187 2748 23 0 3 chr10 66767211 66767517 -78821771 - AluY SINE Alu -6 305 1 231 88 0 0 chr10 66767841 66767875 -78821413 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 3131 50 13 0 chr10 66767882 66768264 -78821024 - L1PA3 LINE L1 0 6155 5769 9297 22 4 0 chr10 66768264 66769429 -78819859 + L1P1 LINE L1 4297 5466 -689 2186 102 10 0 chr10 66769429 66769722 -78819566 - AluSx SINE Alu -16 296 1 196 319 65 65 chr10 66770018 66770156 -78819132 - MIR SINE MIR -101 161 24 328 286 29 9 chr10 66771009 66771114 -78818174 - MIR SINE MIR -107 155 49 201 147 0 0 chr10 66771414 66771448 -78817840 + (GA)n Simple_repeat Simple_repeat 1 34 0 208 344 44 70 chr10 66772270 66772497 -78816791 - L2 LINE L2 -31 3241 3021 22 0 0 0 chr10 66772750 66772772 -78816516 + AT_rich Low_complexity Low_complexity 1 22 0 1692 177 6 19 chr10 66773830 66774146 -78815142 - AluJo SINE Alu 0 312 1 256 171 53 13 chr10 66774274 66774350 -78814938 + (TA)n Simple_repeat Simple_repeat 1 79 0 291 268 191 19 chr10 66774559 66774716 -78814572 + MIR SINE MIR 70 253 -9 1184 257 118 5 chr10 66775889 66776329 -78812959 - LTR33A LTR ERVL -6 517 28 399 285 83 21 chr10 66777191 66777384 -78811904 + L1ME LINE L1 5386 5590 -531 283 317 20 0 chr10 66777476 66777577 -78811711 + L1ME LINE L1 5752 5854 -267 24 0 0 0 chr10 66777597 66777621 -78811667 + AT_rich Low_complexity Low_complexity 1 24 0 28 29 0 0 chr10 66777740 66777775 -78811513 + AT_rich Low_complexity Low_complexity 1 35 0 1122 131 0 55 chr10 66778092 66778275 -78811013 + MER2 DNA MER2_type 1 173 -172 523 181 57 0 chr10 66778409 66778514 -78810774 - MER103 DNA DNA -36 130 20 2287 93 3 10 chr10 66779206 66779507 -78809781 - AluSg SINE Alu -11 299 1 189 0 0 0 chr10 66779715 66779736 -78809552 + (GA)n Simple_repeat Simple_repeat 1 21 0 578 227 165 0 chr10 66780050 66780226 -78809062 - L3 LINE CR1 -97 1480 1276 316 293 66 0 chr10 66780232 66780338 -78808950 + L2 LINE L2 3201 3313 0 186 365 65 0 chr10 66782067 66782174 -78807114 - L2 LINE L2 -32 3240 3127 633 323 164 27 chr10 66782428 66783387 -78805901 - L2 LINE L2 -425 2889 1800 725 313 9 9 chr10 66784423 66784656 -78804632 - MIR SINE MIR -18 244 12 1745 283 61 23 chr10 66784795 66785414 -78803874 - Tigger8 DNA MER2_type -17 649 7 187 273 0 0 chr10 66785428 66785472 -78803816 - L2 LINE L2 -9 3304 3261 343 253 0 0 chr10 66786083 66786170 -78803118 - MIR SINE MIR -55 153 67 420 20 0 0 chr10 66786416 66786465 -78802823 + (CA)n Simple_repeat Simple_repeat 1 49 0 554 227 50 90 chr10 66786465 66786743 -78802545 + L2 LINE L2 3047 3313 0 1107 273 142 15 chr10 66786978 66787436 -78801852 + LTR33 LTR ERVL 1 516 -5 286 336 115 0 chr10 66787466 66787588 -78801700 + MIR3 SINE MIR 38 173 -35 23 68 0 0 chr10 66787826 66787870 -78801418 + AT_rich Low_complexity Low_complexity 1 44 0 192 125 0 0 chr10 66787955 66787987 -78801301 - L2 LINE L2 0 3313 3282 995 123 6 6 chr10 66787992 66788154 -78801134 + HERVL-B3 LTR ERVL 5493 5654 0 2445 172 36 78 chr10 66788154 66788729 -78800559 + MLT2B3 LTR ERVL 1 551 -3 628 208 31 0 chr10 66789599 66789729 -78799559 + MIR SINE MIR 128 261 -1 188 167 21 0 chr10 66789729 66789777 -78799511 + CT-rich Low_complexity Low_complexity 2 50 0 261 152 0 0 chr10 66790067 66790113 -78799175 - L2 LINE L2 -2 3311 3266 751 254 68 32 chr10 66792527 66792779 -78796509 + MIR SINE MIR 2 262 0 2208 85 28 3 chr10 66793032 66793314 -78795974 - AluSx SINE Alu -17 295 7 1148 256 36 57 chr10 66793319 66793812 -78795476 - L2 LINE L2 -10 3303 2821 527 232 0 107 chr10 66794409 66794518 -78794770 + MIR SINE MIR 33 119 -143 2041 148 0 0 chr10 66794518 66794825 -78794463 + AluSx SINE Alu 1 307 0 527 232 0 107 chr10 66794825 66794891 -78794397 + MIR SINE MIR 119 190 -72 7475 184 128 13 chr10 66795834 66797408 -78791880 + MER52A LTR ERV1 1 1755 0 1344 237 95 39 chr10 66797644 66798158 -78791130 + L1ME3 LINE L1 5620 6162 0 219 88 0 0 chr10 66798664 66798698 -78790590 + (TG)n Simple_repeat Simple_repeat 1 34 0 427 325 116 24 chr10 66798704 66799082 -78790206 - L2 LINE L2 -357 2957 2545 347 328 103 39 chr10 66799348 66799580 -78789708 - MIR SINE MIR -8 254 8 398 240 77 62 chr10 66800174 66800382 -78788906 - MLT2F LTR ERVL -10 653 443 2333 108 8 33 chr10 66800401 66800964 -78788324 - MER51A LTR ERV1 0 634 1 1009 277 85 26 chr10 66800969 66801359 -78787929 - MLT2F LTR ERVL -244 419 7 207 0 0 0 chr10 66801482 66801505 -78787783 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1032 179 0 0 chr10 66801513 66801675 -78787613 + FRAM SINE Alu 1 161 -15 182 293 47 66 chr10 66801714 66801820 -78787468 - L2 LINE L2 -6 3307 3204 339 321 163 23 chr10 66801919 66802134 -78787154 + MIR SINE MIR 15 259 -3 987 277 101 12 chr10 66803615 66803943 -78785345 - LTR33 LTR ERVL -155 366 10 312 312 61 48 chr10 66804053 66804249 -78785039 - MIR SINE MIR -46 216 20 215 61 30 0 chr10 66804514 66804547 -78784741 + (GAAA)n Simple_repeat Simple_repeat 3 36 0 1668 207 66 37 chr10 66804802 66805256 -78784032 + MLT1C LTR MaLR 1 467 0 485 308 128 18 chr10 66805462 66805845 -78783443 - MLT1K LTR MaLR -3 585 161 612 253 24 57 chr10 66806193 66806532 -78782756 - MLT1F1 LTR MaLR 0 561 237 1022 181 44 6 chr10 66807691 66807873 -78781415 + MER5A DNA MER1_type 1 189 0 561 238 4 151 chr10 66809466 66809550 -78779738 - MIR SINE MIR 0 262 167 756 52 0 0 chr10 66809550 66809647 -78779641 + (TTCC)n Simple_repeat Simple_repeat 4 100 0 561 238 4 151 chr10 66809647 66809669 -78779619 - MIR SINE MIR -95 167 143 1644 163 0 58 chr10 66809669 66809964 -78779324 - AluJb SINE Alu -34 278 1 2389 69 0 7 chr10 66809967 66810270 -78779018 - AluY SINE Alu -10 301 1 561 238 4 151 chr10 66810270 66810423 -78778865 - MIR SINE MIR -121 141 37 233 306 0 0 chr10 66811178 66811250 -78778038 - Charlie8 DNA MER1_type -1 2416 2345 194 298 0 0 chr10 66811784 66811831 -78777457 + L2 LINE L2 2246 2292 -1022 246 105 0 0 chr10 66812085 66812123 -78777165 + (CAAG)n Simple_repeat Simple_repeat 2 39 0 2022 99 113 0 chr10 66812199 66812491 -78776797 + THE1B LTR MaLR 1 325 -39 7742 114 19 2 chr10 66812491 66813568 -78775720 + THE1B-int LTR MaLR 485 1580 0 2761 97 11 0 chr10 66813568 66813928 -78775360 + THE1B LTR MaLR 1 364 0 420 250 61 100 chr10 66813989 66814037 -78775251 - L1MEc LINE L1 -4872 1683 1635 405 0 0 0 chr10 66814037 66814082 -78775206 + (TG)n Simple_repeat Simple_repeat 2 46 0 420 250 61 100 chr10 66814082 66814779 -78774509 - L1MEc LINE L1 -4920 1635 988 273 29 0 0 chr10 66815487 66815521 -78773767 + (TG)n Simple_repeat Simple_repeat 1 34 0 180 111 0 0 chr10 66815798 66815825 -78773463 + (CTAA)n Simple_repeat Simple_repeat 4 30 0 566 257 29 6 chr10 66815830 66816001 -78773287 - MIR SINE MIR -6 256 82 200 373 0 0 chr10 66816086 66816153 -78773135 - MIR SINE MIR -184 78 12 1740 145 24 12 chr10 66817027 66817292 -78771996 + L1MA9 LINE L1 5795 6164 -148 237 83 0 0 chr10 66817292 66817328 -78771960 + (CA)n Simple_repeat Simple_repeat 1 36 0 1740 145 24 12 chr10 66817328 66817479 -78771809 + L1MA9 LINE L1 6164 6312 0 2133 138 7 0 chr10 66817616 66817913 -78771375 - AluSx SINE Alu -13 299 1 2261 231 24 24 chr10 66817983 66818525 -78770763 - MLT1F LTR MaLR 0 542 1 24 53 0 0 chr10 66819690 66819728 -78769560 + AT_rich Low_complexity Low_complexity 1 38 0 1540 203 17 13 chr10 66819796 66820149 -78769139 + AluJo SINE Alu 10 312 0 1001 147 83 78 chr10 66820173 66820391 -78768897 - MER20 DNA MER1_type 0 219 1 306 138 0 0 chr10 66820399 66820457 -78768831 + (TGAA)n Simple_repeat Simple_repeat 2 59 0 191 129 0 0 chr10 66820550 66820581 -78768707 - L2 LINE L2 -9 3263 3233 187 278 122 22 chr10 66820997 66821087 -78768201 + MIR SINE MIR 53 151 -57 330 287 92 41 chr10 66822397 66822592 -78766696 - MIR SINE MIR -10 252 48 1946 153 3 0 chr10 66823424 66823711 -78765577 + AluJb SINE Alu 1 288 -24 1104 287 94 5 chr10 66823716 66824089 -78765199 + MLT1J LTR MaLR 2 407 -104 1081 232 80 56 chr10 66824162 66824537 -78764751 + MLT1J LTR MaLR 97 480 -31 249 132 0 0 chr10 66825798 66825836 -78763452 + MER103 DNA DNA 14 51 -115 2245 133 0 3 chr10 66826428 66826737 -78762551 - AluSx SINE Alu -4 308 1 240 291 65 58 chr10 66827497 66827648 -78761640 - MER5B DNA MER1_type -36 143 2 428 283 107 0 chr10 66828296 66828473 -78760815 + MIR SINE MIR 63 258 -4 200 297 16 0 chr10 66828473 66828537 -78760751 + CT-rich Low_complexity Low_complexity 4 68 0 2292 158 3 18 chr10 66830114 66830456 -78758832 + MER1B DNA MER1_type 1 337 0 1968 153 0 3 chr10 66830717 66831011 -78758277 + AluSx SINE Alu 3 295 -17 44980 37 3 1 chr10 66831614 66837755 -78751533 - L1PA4 LINE L1 -1 6154 2 2310 107 0 0 chr10 66837765 66838064 -78751224 - AluSc SINE Alu -10 299 1 351 0 0 0 chr10 66838251 66838290 -78750998 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 5508 48 0 0 chr10 66838292 66838919 -78750369 - SVA Other Other -20 1366 740 22 0 0 0 chr10 66839033 66839055 -78750233 + GC_rich Low_complexity Low_complexity 1 22 0 207 0 0 0 chr10 66839100 66839123 -78750165 + (GA)n Simple_repeat Simple_repeat 2 24 0 564 263 77 16 chr10 66839148 66839342 -78749946 - MLT1G1 LTR MaLR -389 206 1 1381 263 85 26 chr10 66839441 66839898 -78749390 + LTR16C LTR ERVL 7 490 -1 191 125 375 0 chr10 66839901 66839941 -78749347 - MIR SINE MIR -160 102 48 243 273 0 0 chr10 66840079 66840134 -78749154 - L2 LINE L2 -11 3261 3207 1627 213 80 3 chr10 66840317 66840678 -78748610 - MLT1B LTR MaLR -1 389 1 891 67 17 0 chr10 66841411 66841530 -78747758 - MLT2A1 LTR ERVL -323 121 1 468 241 123 67 chr10 66841799 66841994 -78747294 - MIR SINE MIR -36 226 21 273 226 11 65 chr10 66842581 66842674 -78746614 - MIR SINE MIR -10 252 165 640 259 68 36 chr10 66842898 66843176 -78746112 - L1ME4a LINE L1 -95 6026 5740 45523 35 1 1 chr10 66843211 66849356 -78739932 - L1PA3 LINE L1 0 6155 9 794 88 0 0 chr10 66849425 66849527 -78739761 - L1PA3 LINE L1 -6044 102 1 411 280 79 85 chr10 66849653 66849971 -78739317 + L2 LINE L2 2931 3246 -26 10381 134 6 8 chr10 66849975 66851536 -78737752 - Tigger1 DNA MER2_type -861 1557 1 1858 133 16 29 chr10 66851563 66851879 -78737409 + AluSx SINE Alu 1 312 0 180 256 23 0 chr10 66851945 66851988 -78737300 + L3 LINE CR1 1533 1576 -1 273 357 76 13 chr10 66852004 66852161 -78737127 + MIR SINE MIR 21 187 -75 643 268 117 26 chr10 66853065 66853296 -78735992 - MIR SINE MIR -1 261 10 301 279 48 44 chr10 66853296 66853540 -78735748 + L1ME LINE L1 5346 5682 -439 225 313 68 0 chr10 66853778 66853925 -78735363 + LTR33 LTR ERVL 44 200 -321 298 244 116 0 chr10 66854505 66854591 -78734697 + L2 LINE L2 3176 3271 -1 1216 204 13 18 chr10 66854727 66854952 -78734336 - MER58A DNA MER1_type 0 224 1 379 281 21 0 chr10 66855396 66855492 -78733796 - MER94 DNA DNA -36 98 1 431 246 100 0 chr10 66857128 66857258 -78732030 + MIR SINE MIR 79 221 -41 2118 132 0 0 chr10 66857571 66857867 -78731421 - AluJb SINE Alu -16 296 1 299 388 98 0 chr10 66857966 66858149 -78731139 - L2 LINE L2 -534 2780 2580 184 161 0 0 chr10 66858415 66858446 -78730842 + MIR SINE MIR 118 148 -114 911 219 270 21 chr10 66858778 66859234 -78730054 - LTR50 LTR ERVL -2 793 452 2007 136 3 3 chr10 66859234 66859521 -78729767 + AluSg SINE Alu 1 287 -23 911 219 270 21 chr10 66859521 66859617 -78729671 - LTR50 LTR ERVL -343 452 3 1840 228 84 31 chr10 66859820 66860306 -78728982 + MLT1E LTR MaLR 18 529 -64 205 324 28 28 chr10 66860363 66860434 -78728854 - L2 LINE L2 -21 3292 3222 229 253 46 132 chr10 66861013 66861187 -78728101 - MIR SINE MIR -84 178 20 216 0 0 0 chr10 66863436 66863460 -78725828 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1587 127 75 56 chr10 66863722 66863989 -78725299 + AluSx SINE Alu 1 272 -40 639 26 0 0 chr10 66863989 66864066 -78725222 + (GAAA)n Simple_repeat Simple_repeat 3 79 0 1244 88 0 6 chr10 66864066 66864247 -78725041 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 664 249 32 63 chr10 66864359 66864580 -78724708 - MIR SINE MIR -2 260 47 718 274 64 50 chr10 66865259 66865602 -78723686 + MLT1L LTR MaLR 154 501 -114 180 288 68 0 chr10 66865696 66865755 -78723533 + MIR SINE MIR 176 238 -24 322 339 51 0 chr10 66866454 66866572 -78722716 + MIR3 SINE MIR 37 160 -48 765 182 177 71 chr10 66866572 66866770 -78722518 - MER20 DNA MER1_type 0 219 1 313 302 169 36 chr10 66866778 66867003 -78722285 - MER102a DNA MER1_type 0 330 76 761 308 50 4 chr10 66867007 66867247 -78722041 + MIR SINE MIR 12 262 0 1047 260 111 7 chr10 66868152 66868559 -78720729 + L1ME4a LINE L1 5596 6044 -77 305 258 0 0 chr10 66868595 66868657 -78720631 + MER91A DNA MER1_type 1 62 -134 22 0 0 0 chr10 66868740 66868762 -78720526 + AT_rich Low_complexity Low_complexity 1 22 0 398 281 7 14 chr10 66868791 66868930 -78720358 - MER69 DNA AcHobo 0 2526 2389 356 227 0 0 chr10 66869075 66869141 -78720147 - MER69 DNA AcHobo -2460 66 1 1395 281 24 63 chr10 66870143 66870921 -78718367 + L1M4 LINE L1 1515 2409 -4416 328 281 132 71 chr10 66870918 66871250 -78718038 + HAL1 LINE L1 1245 1618 -889 * 1961 14 0 5 chr10 66871250 66871467 -78717821 - AluYb8 SINE Alu -4 314 99 328 281 132 71 chr10 66871467 66871625 -78717663 + HAL1 LINE L1 1618 1765 -742 25 31 0 0 chr10 66871645 66871677 -78717611 + AT_rich Low_complexity Low_complexity 1 32 0 270 197 13 26 chr10 66872018 66872094 -78717194 + (TG)n Simple_repeat Simple_repeat 2 76 0 1113 231 9 0 chr10 66872480 66872709 -78716579 + MIR SINE MIR 2 232 -30 245 350 0 19 chr10 66872727 66872830 -78716458 + L1MC5 LINE L1 7778 7878 -83 17599 66 2 6 chr10 66872936 66875886 -78713402 + L1PA6 LINE L1 3204 6152 -2 7123 65 2 6 chr10 66874984 66875888 -78713400 + L1PA6 LINE L1 5254 6154 0 563 229 178 0 chr10 66876372 66876529 -78712759 + MER5A DNA MER1_type 3 187 -2 427 196 49 10 chr10 66876691 66876793 -78712495 - MER5B DNA MER1_type -3 175 70 486 120 0 0 chr10 66877001 66877076 -78712212 + (TA)n Simple_repeat Simple_repeat 2 76 0 24 0 0 0 chr10 66878192 66878216 -78711072 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr10 66879286 66879308 -78709980 + AT_rich Low_complexity Low_complexity 1 22 0 309 290 0 0 chr10 66880951 66881020 -78708268 - L2 LINE L2 -212 3060 2992 272 353 99 49 chr10 66882018 66882789 -78706499 - L2 LINE L2 -733 2581 1773 820 216 5 25 chr10 66882789 66882993 -78706295 + L1MA10 LINE L1 5115 5314 -832 831 32 0 0 chr10 66882993 66883088 -78706200 - AluY SINE Alu -11 300 206 1581 187 10 48 chr10 66883089 66883603 -78705685 + L1MA10 LINE L1 5306 5785 -457 8261 20 2 0 chr10 66883626 66885184 -78704104 + L1PA3 LINE L1 4596 6155 0 6888 167 21 17 chr10 66885197 66887520 -78701768 + L1PA16 LINE L1 3850 6165 -1 2472 140 29 40 chr10 66887512 66887963 -78701325 + L1MA10 LINE L1 5769 6214 -120 * 880 167 0 25 chr10 66887961 66888123 -78701165 + L1MA10 LINE L1 6177 6334 0 * 519 258 88 51 chr10 66888330 66888547 -78700741 - MLT1L LTR MaLR -26 589 365 2165 152 97 42 chr10 66888985 66889387 -78699901 - MSTB LTR MaLR -2 424 1 6613 270 61 27 chr10 66889454 66891046 -78698242 + L2 LINE L2 522 2213 -1101 1549 201 3 23 chr10 66891046 66891350 -78697938 + AluJo SINE Alu 1 298 -14 6613 270 61 27 chr10 66891350 66891970 -78697318 + L2 LINE L2 2213 2810 -504 667 215 94 11 chr10 66891989 66892180 -78697108 - Charlie4a DNA MER1_type -19 489 283 653 274 196 7 chr10 66892207 66892488 -78696800 + L2 LINE L2 2811 3144 -169 465 288 0 48 chr10 66892610 66892756 -78696532 + L2 LINE L2 3175 3313 0 21 0 0 0 chr10 66893359 66893380 -78695908 + AT_rich Low_complexity Low_complexity 1 21 0 665 224 139 68 chr10 66894488 66894769 -78694519 - LTR33A LTR ERVL -17 506 206 716 153 22 36 chr10 66895756 66895893 -78693395 + FRAM SINE Alu 2 136 -40 788 227 262 15 chr10 66896282 66896830 -78692458 + LTR50 LTR ERVL 13 794 -1 316 297 94 50 chr10 66898004 66898206 -78691082 + MIR SINE MIR 27 237 -25 394 298 216 9 chr10 66898851 66899069 -78690219 + MLT1K LTR MaLR 325 587 -1 2305 165 3 14 chr10 66899196 66899565 -78689723 - MLT1A1 LTR MaLR 0 365 1 623 109 20 0 chr10 66900444 66900545 -78688743 + (TTCC)n Simple_repeat Simple_repeat 3 105 0 376 293 0 23 chr10 66900669 66900802 -78688486 - LTR67 LTR ERVL 0 557 428 216 0 0 0 chr10 66901064 66901088 -78688200 + (A)n Simple_repeat Simple_repeat 1 24 0 309 270 174 92 chr10 66901099 66901403 -78687885 + L2 LINE L2 2938 3266 -6 205 244 24 0 chr10 66901581 66901622 -78687666 - MER91A DNA MER1_type -12 184 143 210 159 43 0 chr10 66901728 66901797 -78687491 + (TA)n Simple_repeat Simple_repeat 2 73 0 333 305 52 58 chr10 66901812 66901966 -78687322 - MER91A DNA MER1_type -43 153 1 254 225 36 18 chr10 66902362 66902473 -78686815 + (TA)n Simple_repeat Simple_repeat 1 113 0 1401 299 92 14 chr10 66902478 66903586 -78685702 - L1ME3A LINE L1 -207 5963 4755 490 191 17 0 chr10 66904029 66904134 -78685154 - MIR SINE MIR -70 138 63 301 274 49 20 chr10 66904214 66904316 -78684972 + L2 LINE L2 3168 3272 0 757 258 153 43 chr10 66905408 66905853 -78683435 - L2 LINE L2 0 3313 2820 1285 252 78 41 chr10 66907449 66907937 -78681351 - LTR33 LTR ERVL -13 508 3 239 161 18 0 chr10 66908062 66908118 -78681170 + T-rich Low_complexity Low_complexity 4 60 0 330 307 46 13 chr10 66908166 66908319 -78680969 + MER117 DNA MER1_type 1 158 -39 828 172 207 6 chr10 66908668 66908758 -78680530 - MER3 DNA MER1_type 0 209 138 300 27 0 0 chr10 66908758 66908795 -78680493 + (CA)n Simple_repeat Simple_repeat 1 37 0 828 172 207 6 chr10 66908795 66908878 -78680410 - MER3 DNA MER1_type -71 138 1 674 279 65 9 chr10 66908953 66909168 -78680120 - MIR SINE MIR -25 237 11 808 287 65 26 chr10 66909435 66909742 -78679546 - LTR33 LTR ERVL -1 520 202 392 287 0 0 chr10 66909769 66909884 -78679404 - LTR33 LTR ERVL -406 115 1 374 338 53 56 chr10 66910369 66910635 -78678653 + L2 LINE L2 2844 3108 -164 291 222 0 0 chr10 66910846 66910900 -78678388 - MER53 DNA DNA 0 189 136 246 188 0 21 chr10 66910858 66910906 -78678382 + MER53 DNA DNA 23 69 -120 * 2955 136 23 23 chr10 66910906 66911782 -78677506 + L1MC1 LINE L1 5389 6315 -18 1852 152 14 3 chr10 66911857 66912147 -78677141 + AluSx SINE Alu 1 293 -19 374 71 89 0 chr10 66912611 66912667 -78676621 - MER53 DNA DNA -127 62 2 334 288 27 47 chr10 66912874 66912996 -78676292 + MIR SINE MIR 8 127 -81 1505 176 18 123 chr10 66913243 66913624 -78675664 - MER58B DNA MER1_type 0 341 1 274 277 17 101 chr10 66913721 66913840 -78675448 + MIR SINE MIR 42 150 -58 2064 138 7 0 chr10 66914899 66915197 -78674091 + AluSx SINE Alu 1 300 -12 275 352 48 9 chr10 66915221 66915326 -78673962 + MIR SINE MIR 42 150 -112 313 299 195 7 chr10 66915619 66915773 -78673515 + MIR SINE MIR 23 205 -57 779 290 112 16 chr10 66916288 66916664 -78672624 - LTR16A LTR ERVL -18 432 21 329 282 41 6 chr10 66917464 66917634 -78671654 + (TA)n Simple_repeat Simple_repeat 1 176 0 195 129 0 0 chr10 66919261 66919292 -78669996 + (A)n Simple_repeat Simple_repeat 1 31 0 231 370 54 0 chr10 66919788 66919880 -78669408 - L3b LINE CR1 -98 1485 1389 459 0 0 0 chr10 66922389 66922440 -78666848 + (CA)n Simple_repeat Simple_repeat 2 52 0 973 146 161 36 chr10 66922440 66922632 -78666656 - MER46A DNA MER2_type -2 234 19 368 159 64 9 chr10 66922637 66922966 -78666322 + (TA)n Simple_repeat Simple_repeat 1 346 0 1910 119 61 0 chr10 66923000 66923278 -78666010 + AluSx SINE Alu 1 295 -17 234 0 0 0 chr10 66923386 66923412 -78665876 + (GGA)n Simple_repeat Simple_repeat 2 27 0 511 275 16 66 chr10 66923471 66923653 -78665635 - MIR SINE MIR -70 192 20 693 266 203 16 chr10 66923775 66924154 -78665134 + MLT1J2 LTR MaLR 1 450 0 381 58 0 0 chr10 66924317 66924369 -78664919 + (TC)n Simple_repeat Simple_repeat 1 52 0 1281 196 89 12 chr10 66924445 66924889 -78664399 - MER69 DNA AcHobo -4 2522 2001 * 1323 297 39 28 chr10 66924872 66925075 -78664213 - MER69 DNA AcHobo -652 574 375 1654 171 153 6 chr10 66925075 66925402 -78663886 + THE1C LTR MaLR 1 375 0 1323 297 39 28 chr10 66925402 66925629 -78663659 - MER69 DNA AcHobo -851 375 139 382 259 71 0 chr10 66926165 66926250 -78663038 + L2 LINE L2 3199 3289 -24 683 196 12 9 chr10 66926259 66926586 -78662702 + GA-rich Low_complexity Low_complexity 1 328 0 498 246 18 0 chr10 66926603 66926717 -78662571 + MIR SINE MIR 114 229 -33 1209 144 0 0 chr10 66928162 66928342 -78660946 - AluSg/x SINE Alu -1 311 132 285 316 83 25 chr10 66928507 66928718 -78660570 + MIR SINE MIR 36 262 0 4138 100 3 5 chr10 66928965 66929545 -78659743 - L1PA10 LINE L1 -5 6163 5585 537 251 70 16 chr10 66930206 66930437 -78658851 - MIR SINE MIR 0 262 20 1098 210 37 33 chr10 66930700 66930972 -78658316 - ORSL DNA AcHobo 0 275 3 342 267 61 8 chr10 66932621 66932752 -78656536 + MIR3 SINE MIR 22 159 -49 180 97 0 0 chr10 66933533 66933564 -78655724 + (TGAG)n Simple_repeat Simple_repeat 3 33 0 274 306 145 26 chr10 66934121 66934314 -78654974 - MIR SINE MIR -28 234 19 199 313 16 0 chr10 66934654 66934718 -78654570 + MIR SINE MIR 35 99 -109 262 275 87 29 chr10 66934803 66934941 -78654347 - MIR SINE MIR -72 190 45 213 294 0 98 chr10 66934936 66935038 -78654250 + MIR3 SINE MIR 99 190 -18 * 195 42 0 0 chr10 66935480 66935504 -78653784 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 432 127 0 0 chr10 66935505 66935603 -78653685 - AluS SINE Alu 0 319 222 248 287 50 10 chr10 66935603 66935704 -78653584 - MER5A DNA MER1_type -27 162 58 418 228 0 0 chr10 66936180 66936259 -78653029 + MER94 DNA DNA 1 79 -55 829 164 65 84 chr10 66936270 66936452 -78652836 + L1PB4 LINE L1 5947 6127 -29 1920 145 0 3 chr10 66936452 66936761 -78652527 - AluSx SINE Alu 0 308 1 829 164 65 84 chr10 66936761 66936791 -78652497 + L1PB4 LINE L1 6127 6156 0 259 182 0 91 chr10 66936796 66936873 -78652415 + MER94 DNA DNA 62 131 -3 501 225 156 17 chr10 66937227 66937400 -78651888 + MIR SINE MIR 28 224 -38 878 246 198 15 chr10 66937536 66938027 -78651261 - MLT1G3 LTR MaLR -5 525 1 209 328 161 16 chr10 66938410 66938596 -78650692 + L2 LINE L2 2871 3083 -189 1786 161 13 33 chr10 66938962 66939261 -78650027 - AluJo SINE Alu -19 293 1 242 73 24 0 chr10 66939291 66939332 -78649956 + (CA)n Simple_repeat Simple_repeat 2 43 0 342 67 0 0 chr10 66939696 66939741 -78649547 + (CA)n Simple_repeat Simple_repeat 1 45 0 226 227 0 0 chr10 66941778 66941822 -78647466 + MIR SINE MIR 216 259 -3 553 289 119 41 chr10 66944831 66945266 -78644022 - MLT1L LTR MaLR 0 615 48 1594 246 84 43 chr10 66945625 66945959 -78643329 + MLT1L LTR MaLR 5 375 -240 2470 78 0 7 chr10 66945959 66946266 -78643022 + AluY SINE Alu 1 305 -6 1594 246 84 43 chr10 66946266 66946516 -78642772 + MLT1L LTR MaLR 375 613 -2 2298 108 0 0 chr10 66947623 66947919 -78641369 - AluSx SINE Alu -16 296 1 553 318 47 8 chr10 66948376 66948612 -78640676 - MARNA DNA Mariner -13 573 329 1038 322 108 53 chr10 66949355 66950468 -78638820 + L3 LINE CR1 388 1561 -16 23 0 0 0 chr10 66950916 66950939 -78638349 + AT_rich Low_complexity Low_complexity 1 23 0 1121 150 0 98 chr10 66951143 66951414 -78637874 + AluJo SINE Alu 86 333 0 636 292 33 49 chr10 66952356 66952722 -78636566 + L2 LINE L2 2954 3313 0 33304 103 7 60 chr10 66953210 66956850 -78632438 + L1PA7 LINE L1 12 3147 -3007 2132 97 48 0 chr10 66956850 66957140 -78632148 + AluSp SINE Alu 3 306 -7 33304 103 7 60 chr10 66957140 66959995 -78629293 + L1PA7 LINE L1 3147 6152 -2 191 355 0 0 chr10 66960746 66960808 -78628480 + L2 LINE L2 3012 3073 -240 839 222 0 0 chr10 66962712 66962865 -78626423 - FRAM SINE Alu -22 154 2 1933 144 3 3 chr10 66963297 66963588 -78625700 + AluJb SINE Alu 4 294 -18 1869 128 24 4 chr10 66964406 66964820 -78624468 - L1MC1 LINE L1 0 6333 5920 278 288 43 18 chr10 66964820 66964983 -78624305 - L1PA8A LINE L1 -273 5858 5692 1640 150 0 83 chr10 66965491 66965817 -78623471 + AluJb SINE Alu 3 301 -11 1136 151 9 53 chr10 66965935 66966160 -78623128 + MER20 DNA MER1_type 4 218 -1 4320 148 12 32 chr10 66966865 66967590 -78621698 - MER50 LTR ERV1 -23 711 1 526 284 58 7 chr10 66968920 66969075 -78620213 - MIR3 SINE MIR -26 182 20 361 121 212 0 chr10 66969510 66969576 -78619712 - MADE1 DNA Mariner 0 80 1 21 0 0 0 chr10 66969855 66969876 -78619412 + AT_rich Low_complexity Low_complexity 1 21 0 272 202 244 25 chr10 66970742 66970861 -78618427 - MIR3 SINE MIR -26 182 38 389 252 298 8 chr10 66971653 66971891 -78617397 + L2 LINE L2 2501 2807 -507 490 305 57 73 chr10 66972089 66972460 -78616828 + L2 LINE L2 2947 3311 -2 1588 171 21 25 chr10 66972847 66973133 -78616155 - AluJo SINE Alu -22 290 6 262 295 11 42 chr10 66973167 66973262 -78616026 - MER5A DNA MER1_type -78 111 20 2310 67 0 17 chr10 66973926 66974223 -78615065 + AluY SINE Alu 1 292 -19 300 191 0 0 chr10 66974270 66974333 -78614955 + LTR30 LTR ERV1 552 614 -108 210 37 0 0 chr10 66974348 66974375 -78614913 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 239 313 30 10 chr10 66974381 66974480 -78614808 - MER5A DNA MER1_type -53 136 36 * 346 255 59 0 chr10 66974393 66974495 -78614793 + MER5B DNA MER1_type 66 173 -5 335 286 32 8 chr10 66974507 66974633 -78614655 - MIR SINE MIR -57 151 23 506 194 8 54 chr10 66974732 66974861 -78614427 + MIR SINE MIR 124 246 -16 2202 106 0 0 chr10 66980315 66980598 -78608690 + AluSq SINE Alu 22 304 -9 322 322 0 0 chr10 66990606 66990696 -78598592 - MIR SINE MIR -87 121 32 290 366 138 33 chr10 66992148 66992481 -78596807 - L2 LINE L2 -32 3240 2873 445 268 45 81 chr10 66993400 66993525 -78595763 + MIR SINE MIR 16 106 -156 2422 96 0 13 chr10 66993525 66993838 -78595450 + AluSc SINE Alu 1 309 0 445 268 45 81 chr10 66993838 66993988 -78595300 + MIR SINE MIR 106 260 -2 495 285 57 0 chr10 66993999 66994157 -78595131 - MIR SINE MIR -15 247 81 374 289 186 5 chr10 66995588 66995782 -78593506 - MIR SINE MIR 0 262 34 283 210 74 12 chr10 66995792 66995873 -78593415 + MIR SINE MIR 60 145 -63 3502 58 25 0 chr10 66996904 66997335 -78591953 + MLT2A1 LTR ERVL 1 442 -2 607 188 71 0 chr10 66997495 66997607 -78591681 - L2 LINE L2 -1 3312 3193 513 329 111 19 chr10 66997665 66998042 -78591246 - L3b LINE CR1 -59 1524 1113 323 264 12 56 chr10 66998100 66998262 -78591026 - MIR SINE MIR -53 155 43 2110 116 43 15 chr10 66999175 66999503 -78589785 + MER1B DNA MER1_type 1 337 0 461 277 184 20 chr10 66999546 66999893 -78589395 + L2 LINE L2 2866 3269 -3 313 323 0 0 chr10 66999952 67000048 -78589240 + MIR3 SINE MIR 109 204 -4 204 293 111 20 chr10 67001013 67001112 -78588176 - L2 LINE L2 -15 3257 3150 560 173 189 27 chr10 67003186 67003371 -78585917 + MER113 DNA MER1_type? 1 215 -306 211 234 21 0 chr10 67003511 67003558 -78585730 + (TATATG)n Simple_repeat Simple_repeat 4 51 0 304 211 137 11 chr10 67003559 67003654 -78585634 + L1MC4 LINE L1 6595 6701 -1341 236 271 47 0 chr10 67003655 67003740 -78585548 - L1MC4 LINE L1 -1340 6702 6614 191 114 29 0 chr10 67003740 67003775 -78585513 + (TATG)n Simple_repeat Simple_repeat 2 37 0 321 89 0 0 chr10 67003809 67003854 -78585434 + (TG)n Simple_repeat Simple_repeat 2 46 0 360 227 77 153 chr10 67003973 67004339 -78584949 + L1ME4a LINE L1 1269 1606 -4924 601 116 21 0 chr10 67004361 67004456 -78584832 + L1MA7 LINE L1 6012 6108 -183 1300 71 0 0 chr10 67004457 67004635 -78584653 + AluSg/x SINE Alu 129 306 0 845 200 11 0 chr10 67004636 67004821 -78584467 + L1MA7 LINE L1 6103 6289 -2 4139 144 138 82 chr10 67004846 67005196 -78584092 + L1MC3 LINE L1 6701 7030 -755 286 260 52 0 chr10 67005196 67005273 -78584015 + MLT1F1 LTR MaLR 45 125 -442 4139 144 138 82 chr10 67005273 67005871 -78583417 + L1MC3 LINE L1 7030 7783 -2 225 260 0 70 chr10 67006041 67006141 -78583147 + L1ME4a LINE L1 1848 1940 -4600 1802 257 64 43 chr10 67006170 67006498 -78582790 + L1ME4a LINE L1 5043 5363 -1195 2328 98 0 3 chr10 67006498 67006795 -78582493 + AluSx SINE Alu 1 296 -16 1802 257 64 43 chr10 67006795 67007068 -78582220 + L1ME4a LINE L1 5363 5629 -929 2279 86 0 46 chr10 67007068 67007392 -78581896 + AluY SINE Alu 2 310 -1 1802 257 64 43 chr10 67007392 67008076 -78581212 + L1ME4a LINE L1 5629 6355 -203 384 198 189 27 chr10 67008076 67008187 -78581101 + MIR SINE MIR 58 186 -76 189 107 0 0 chr10 67008240 67008268 -78581020 + (TTA)n Simple_repeat Simple_repeat 2 29 0 266 288 41 0 chr10 67008349 67008422 -78580866 - MIR SINE MIR -75 187 112 2231 69 38 3 chr10 67008948 67009238 -78580050 + AluY SINE Alu 1 300 -11 730 278 49 20 chr10 67009272 67009517 -78579771 - MIR SINE MIR -1 261 10 557 304 101 8 chr10 67009697 67009934 -78579354 - MIR SINE MIR 0 262 4 368 239 115 0 chr10 67009987 67010100 -78579188 - L2 LINE L2 0 3313 3188 380 159 61 98 chr10 67010468 67010600 -78578688 + L1ME4a LINE L1 6361 6487 -28 5644 134 30 4 chr10 67010747 67011075 -78578213 - L1MB3 LINE L1 -1 6182 5864 2073 192 6 6 chr10 67011075 67011440 -78577848 - MLT1A1 LTR MaLR 0 365 1 5644 134 30 4 chr10 67011440 67012093 -78577195 - L1MB3 LINE L1 -319 5864 5180 400 281 55 0 chr10 67012517 67012663 -78576625 + MER103 DNA DNA 12 165 -1 527 270 65 35 chr10 67013337 67013721 -78575567 - L1ME4a LINE L1 -157 5964 5561 767 308 90 63 chr10 67013903 67014501 -78574787 + L3 LINE CR1 886 1499 -78 352 329 126 0 chr10 67014900 67015067 -78574221 + MER117 DNA MER1_type 1 188 -9 289 296 23 0 chr10 67015924 67016012 -78573276 - MIR SINE MIR -76 132 43 418 261 28 33 chr10 67016112 67016292 -78572996 + CT-rich Low_complexity Low_complexity 1 179 0 333 0 0 0 chr10 67017672 67017709 -78571579 + (TG)n Simple_repeat Simple_repeat 1 37 0 518 213 101 58 chr10 67017748 67017936 -78571352 - MER117 DNA MER1_type -1 196 1 1837 129 68 96 chr10 67019069 67019464 -78569824 + MLT1B LTR MaLR 1 384 -6 795 252 57 51 chr10 67020301 67020801 -78568487 + L2 LINE L2 2666 3187 -126 2281 132 0 3 chr10 67020827 67021146 -78568142 + MER1B DNA MER1_type 22 339 0 587 176 34 8 chr10 67021149 67021268 -78568020 + L2 LINE L2 3192 3313 0 2220 105 0 3 chr10 67021542 67021851 -78567437 + AluSx SINE Alu 1 308 0 236 240 0 20 chr10 67022579 67022629 -78566659 + polypyrimidine Low_complexity Low_complexity 4 52 0 182 293 23 68 chr10 67022764 67022897 -78566391 - L2 LINE L2 -166 3106 2980 315 267 111 15 chr10 67023455 67023590 -78565698 - MIR3 SINE MIR -8 200 53 2321 107 0 7 chr10 67023671 67023979 -78565309 - AluSx SINE Alu -6 306 1 1448 123 51 8 chr10 67024601 67024854 -78564434 - L1MA9 LINE L1 -1 6311 6048 521 292 120 2 chr10 67024943 67025227 -78564061 - LTR33 LTR ERVL 0 521 140 219 344 16 23 chr10 67025318 67025446 -78563842 + MIR3 SINE MIR 81 207 -1 2272 109 7 0 chr10 67025710 67026013 -78563275 - AluSc SINE Alu -4 305 1 499 200 141 18 chr10 67029152 67029322 -78559966 - L1MC3 LINE L1 0 7785 7595 968 224 49 120 chr10 67029963 67030329 -78558959 + MER102b DNA MER1_type 2 341 0 1647 102 0 0 chr10 67030711 67030927 -78558361 - AluSg/x SINE Alu -11 301 86 363 247 25 0 chr10 67031331 67031412 -78557876 + L2 LINE L2 3230 3312 -1 352 224 0 41 chr10 67031710 67031808 -78557480 - MER103 DNA DNA -69 97 4 249 108 0 0 chr10 67032704 67032741 -78556547 + (A)n Simple_repeat Simple_repeat 1 37 0 23 0 0 0 chr10 67032806 67032829 -78556459 + AT_rich Low_complexity Low_complexity 1 23 0 1396 282 38 27 chr10 67033188 67033666 -78555622 + L2 LINE L2 2822 3304 -9 342 356 75 24 chr10 67034240 67034535 -78554753 + L2 LINE L2 2449 2758 -556 194 265 121 60 chr10 67034969 67035052 -78554236 + L2 LINE L2 3198 3285 -28 561 148 6 49 chr10 67035492 67035654 -78553634 + GA-rich Low_complexity Low_complexity 2 156 0 231 366 116 6 chr10 67035769 67035941 -78553347 + L2 LINE L2 3047 3237 -35 2269 84 3 7 chr10 67036398 67036695 -78552593 + AluSg1 SINE Alu 1 296 -13 590 299 50 54 chr10 67036946 67037516 -78551772 + L1ME3A LINE L1 5315 5881 -240 802 262 65 4 chr10 67037601 67037830 -78551458 + MIR SINE MIR 4 246 -16 224 327 196 21 chr10 67037962 67038243 -78551045 + L2 LINE L2 2564 2893 -421 381 308 46 8 chr10 67038327 67038457 -78550831 - MER5A DNA MER1_type -48 141 7 196 220 20 40 chr10 67038680 67038730 -78550558 + L2 LINE L2 3210 3258 -14 835 294 36 8 chr10 67039134 67039386 -78549902 + MIR SINE MIR 3 261 -1 459 0 0 0 chr10 67040067 67040118 -78549170 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 2021 106 29 0 chr10 67040120 67040393 -78548895 - AluSx SINE Alu -31 281 1 944 204 121 63 chr10 67040526 67040894 -78548394 + MLT1C LTR MaLR 38 467 0 319 185 49 12 chr10 67041003 67041084 -78548204 + MLT1L LTR MaLR 1 84 -531 25 0 0 0 chr10 67041513 67041538 -78547750 + AT_rich Low_complexity Low_complexity 1 25 0 792 193 184 5 chr10 67041538 67041756 -78547532 + L1ME3A LINE L1 5901 6157 -13 205 335 112 19 chr10 67042790 67043005 -78546283 - L2 LINE L2 -215 3057 2823 1674 128 78 0 chr10 67043074 67043332 -78545956 + AluSq SINE Alu 1 278 -35 2270 45 41 31 chr10 67043332 67043620 -78545668 + AluY SINE Alu 3 295 -16 309 26 0 0 chr10 67043649 67043687 -78545601 + (TG)n Simple_repeat Simple_repeat 2 39 0 4617 176 70 14 chr10 67043687 67043724 -78545564 - L1MB3 LINE L1 -15 6168 6134 2059 122 10 0 chr10 67043724 67044019 -78545269 - AluSg SINE Alu -12 298 1 4617 176 70 14 chr10 67044019 67044643 -78544645 - L1MB3 LINE L1 -49 6134 5433 258 56 0 0 chr10 67044643 67044679 -78544609 + (TTTTG)n Simple_repeat Simple_repeat 5 40 0 4617 176 70 14 chr10 67044679 67045013 -78544275 - L1MB3 LINE L1 -750 5433 5119 2928 100 28 2 chr10 67045016 67045514 -78543774 - L1MA4A LINE L1 -6 6297 5734 2919 189 18 70 chr10 67045517 67045968 -78543320 - L1MB3 LINE L1 -977 5169 4766 1975 124 33 0 chr10 67045968 67046278 -78543010 - AluSx SINE Alu 0 319 1 2919 189 18 70 chr10 67046278 67046535 -78542753 - L1MB3 LINE L1 -1380 4766 4497 3108 170 41 3 chr10 67047053 67047618 -78541670 + L1MB4 LINE L1 5578 6163 -17 471 191 278 12 chr10 67047976 67048149 -78541139 + ORSL DNA AcHobo 1 219 -56 557 269 76 31 chr10 67048329 67048552 -78540736 + MIR SINE MIR 1 233 -29 210 290 223 45 chr10 67048890 67049204 -78540084 + L2 LINE L2 2812 3181 -91 712 195 41 116 chr10 67050558 67050775 -78538513 + L1ME3 LINE L1 5916 6148 -14 1655 170 11 11 chr10 67050775 67051057 -78538231 + AluJo SINE Alu 1 282 -30 207 0 0 0 chr10 67051060 67051083 -78538205 + (GAAAA)n Simple_repeat Simple_repeat 2 24 0 712 195 41 116 chr10 67051083 67051128 -78538160 + L1ME3 LINE L1 6150 6162 0 309 239 66 0 chr10 67052284 67052409 -78536879 + L1M1 LINE L1 5677 5785 -517 1672 189 0 21 chr10 67052452 67052743 -78536545 - AluJb SINE Alu -26 286 2 413 250 29 79 chr10 67053615 67053755 -78535533 + L2 LINE L2 3140 3272 0 228 67 0 0 chr10 67054422 67054452 -78534836 + (GA)n Simple_repeat Simple_repeat 1 30 0 525 290 130 10 chr10 67054755 67054962 -78534326 - MIR SINE MIR 0 262 31 708 322 112 48 chr10 67055141 67055641 -78533647 + L3 LINE CR1 1034 1565 -12 2132 118 0 0 chr10 67056356 67056702 -78532586 + AluSx SINE Alu 3 348 0 553 328 99 4 chr10 67056849 67057081 -78532207 - MIR SINE MIR -8 254 1 277 213 49 0 chr10 67057124 67057185 -78532103 - L2 LINE L2 -23 3249 3186 286 283 33 0 chr10 67057239 67057331 -78531957 - L2 LINE L2 -210 3062 2968 1034 168 56 0 chr10 67058018 67058197 -78531091 - MER5A DNA MER1_type 0 189 1 347 269 256 0 chr10 67058408 67058568 -78530720 - Charlie8 DNA MER1_type -2158 259 59 190 262 0 0 chr10 67058571 67058613 -78530675 + MIR3 SINE MIR 148 189 -19 540 215 62 0 chr10 67058613 67058743 -78530545 - L1MD3 LINE L1 -332 7663 7526 598 248 56 25 chr10 67058816 67058977 -78530311 + MER63A DNA MER1_type 38 203 -7 330 239 29 6 chr10 67059126 67059228 -78530060 + MIR SINE MIR 17 119 -89 268 179 26 0 chr10 67059239 67059317 -78529971 + (TA)n Simple_repeat Simple_repeat 1 80 0 206 218 18 18 chr10 67059342 67059397 -78529891 + (TA)n Simple_repeat Simple_repeat 2 56 0 189 0 0 0 chr10 67059397 67059418 -78529870 + (CA)n Simple_repeat Simple_repeat 2 22 0 1989 135 0 0 chr10 67060470 67060936 -78528352 + AluSx SINE Alu 1 466 0 1310 49 0 22 chr10 67060752 67061039 -78528249 + (GAAA)n Simple_repeat Simple_repeat 1 283 0 850 252 83 33 chr10 67061050 67061292 -78527996 - MIR SINE MIR -3 259 6 480 256 36 42 chr10 67061546 67061714 -78527574 + MIR3 SINE MIR 21 187 -21 813 194 161 0 chr10 67063531 67063711 -78525577 + MER3 DNA MER1_type 1 209 0 1909 142 0 35 chr10 67065915 67066226 -78523062 - AluJo SINE Alu -10 302 3 2072 127 0 3 chr10 67066900 67067206 -78522082 + AluSq SINE Alu 1 305 0 411 301 171 20 chr10 67067212 67067411 -78521877 - MIR SINE MIR -15 247 19 462 250 76 42 chr10 67067659 67067803 -78521485 + L3 LINE CR1 347 495 -1082 624 286 73 100 chr10 67067929 67068397 -78520891 + L2 LINE L2 2816 3270 -2 986 305 113 57 chr10 67068425 67069198 -78520090 + L3 LINE CR1 736 1551 -26 255 313 47 47 chr10 67069358 67069486 -78519802 + MIR3 SINE MIR 28 155 -53 279 315 22 11 chr10 67069531 67069620 -78519668 + MER5A DNA MER1_type 2 91 -98 222 281 188 31 chr10 67069562 67069658 -78519630 - MER5A DNA MER1_type -23 166 56 * 191 86 0 29 chr10 67072040 67072075 -78517213 + (CAAAAA)n Simple_repeat Simple_repeat 1 34 0 1725 216 33 90 chr10 67072949 67073368 -78515920 + MER34 LTR ERV1 1 380 -162 1681 166 6 46 chr10 67073368 67073693 -78515595 - AluJo SINE Alu 0 312 1 1725 216 33 90 chr10 67073693 67073848 -78515440 + MER34 LTR ERV1 380 542 0 351 0 0 0 chr10 67074087 67074126 -78515162 + (CA)n Simple_repeat Simple_repeat 1 39 0 322 286 150 8 chr10 67074171 67074304 -78514984 - MIR3 SINE MIR -37 171 20 426 316 6 19 chr10 67074761 67074919 -78514369 + L2 LINE L2 3158 3313 0 276 350 19 57 chr10 67075088 67075292 -78513996 + MIR SINE MIR 20 217 -45 217 319 14 0 chr10 67076346 67076415 -78512873 - L2 LINE L2 -665 2649 2580 1821 185 0 10 chr10 67076778 67077092 -78512196 + AluJb SINE Alu 1 311 -1 444 82 0 0 chr10 67077094 67077155 -78512133 + (GGAA)n Simple_repeat Simple_repeat 3 63 0 537 312 157 51 chr10 67077474 67077868 -78511420 - L2 LINE L2 0 3272 2837 186 133 0 0 chr10 67079651 67079681 -78509607 + (TCCA)n Simple_repeat Simple_repeat 1 30 0 314 245 95 84 chr10 67079804 67079938 -78509350 - MIR SINE MIR -56 152 16 446 269 132 16 chr10 67080476 67080658 -78508630 - MIR SINE MIR -12 250 48 182 31 0 62 chr10 67081441 67081473 -78507815 + (CAAAAA)n Simple_repeat Simple_repeat 4 33 0 1354 142 10 0 chr10 67081866 67082071 -78507217 - L1PA16 LINE L1 -9 6157 5951 741 250 93 42 chr10 67084199 67084531 -78504757 - HAL1 LINE L1 -105 2402 2054 225 284 90 15 chr10 67084833 67084967 -78504321 + L2 LINE L2 3160 3303 -10 248 348 92 56 chr10 67085467 67085881 -78503407 + L2 LINE L2 2844 3272 0 437 239 0 11 chr10 67087331 67087419 -78501869 + MIR3 SINE MIR 115 201 -7 1002 195 42 116 chr10 67090409 67090570 -78498718 + L1M4 LINE L1 2278 2449 -3697 2060 108 0 65 chr10 67090570 67090894 -78498394 - AluSx SINE Alu -9 303 1 1002 195 42 116 chr10 67090894 67091112 -78498176 + L1M4 LINE L1 2449 2629 -3517 532 174 41 0 chr10 67091173 67091271 -78498017 + MER58B DNA MER1_type 239 340 -1 453 189 90 0 chr10 67091286 67091397 -78497891 + L1M4 LINE L1 2606 2726 -3420 * 775 206 12 0 chr10 67091395 67091560 -78497728 + L1M4 LINE L1 4721 4887 -1259 734 227 92 0 chr10 67091599 67091762 -78497526 - MIR SINE MIR -72 190 13 2350 95 3 7 chr10 67092894 67093200 -78496088 + AluSx SINE Alu 1 305 -7 3911 174 44 25 chr10 67093303 67094052 -78495236 + MER4E LTR ERV1 1 763 -16 6992 98 37 3 chr10 67094123 67095245 -78494043 + L1MA3 LINE L1 5144 6305 0 938 107 40 0 chr10 67095304 67095454 -78493834 - L1MA9 LINE L1 0 6312 6157 2414 140 15 15 chr10 67095527 67095998 -78493290 - MER52C LTR ERV1 -788 490 20 22 35 0 0 chr10 67096145 67096174 -78493114 + AT_rich Low_complexity Low_complexity 1 29 0 10002 164 115 32 chr10 67097995 67098443 -78490845 - Charlie5 DNA MER1_type -1 2623 2214 2154 57 25 21 chr10 67098443 67098763 -78490525 + AluY SINE Alu 1 321 0 10002 164 115 32 chr10 67098763 67099456 -78489832 - Charlie5 DNA MER1_type -410 2214 1580 8432 99 86 26 chr10 67099456 67100748 -78488540 - SVA Other Other 0 1386 18 10002 164 115 32 chr10 67100748 67101277 -78488011 - Charlie5 DNA MER1_type -1044 1580 1097 195 100 0 0 chr10 67101277 67101307 -78487981 + (TG)n Simple_repeat Simple_repeat 2 31 0 10002 164 115 32 chr10 67101307 67102053 -78487235 - Charlie5 DNA MER1_type -1527 1097 2 623 194 0 0 chr10 67102727 67102820 -78486468 + AluJo SINE Alu 2 94 -218 1853 124 58 0 chr10 67102822 67103113 -78486175 + AluSx SINE Alu 1 308 -4 1482 145 0 13 chr10 67103122 67103350 -78485938 + AluJo SINE Alu 84 308 -4 2193 116 0 3 chr10 67103350 67103643 -78485645 + AluSx SINE Alu 1 292 -20 459 246 20 46 chr10 67103657 67103852 -78485436 + L1ME4a LINE L1 5774 5963 -158 33 43 0 0 chr10 67103978 67104025 -78485263 + AT_rich Low_complexity Low_complexity 1 47 0 1764 61 5 0 chr10 67104106 67104320 -78484968 - L1PA5 LINE L1 -7 6147 5933 782 210 131 51 chr10 67105919 67106353 -78482935 - HAL1 LINE L1 -23 2484 2016 229 283 0 0 chr10 67106354 67106407 -78482881 - U6 snRNA snRNA 0 107 55 631 282 77 44 chr10 67107035 67107409 -78481879 - MLT1J LTR MaLR -3 611 216 1570 165 127 4 chr10 67109344 67109604 -78479684 + AluJb SINE Alu 1 292 -10 235 379 117 19 chr10 67109642 67109692 -78479596 + L2 LINE L2 1755 1799 -1515 2273 98 0 7 chr10 67109692 67109989 -78479299 - AluSx SINE Alu -13 299 5 235 379 117 19 chr10 67109989 67110358 -78478930 + L2 LINE L2 1799 2215 -1099 397 280 195 45 chr10 67110548 67110748 -78478540 + MIR SINE MIR 32 261 -1 1769 171 14 3 chr10 67111112 67111398 -78477890 - AluJo SINE Alu -23 289 1 875 183 13 0 chr10 67111496 67111649 -78477639 + MER3 DNA MER1_type 1 155 -54 214 354 89 41 chr10 67111722 67112013 -78477275 + L2 LINE L2 2871 3175 -97 1725 105 18 13 chr10 67112345 67112574 -78476714 - MER30 DNA MER1_type 0 230 1 303 316 57 19 chr10 67113039 67113197 -78476091 + L2 LINE L2 3147 3310 -3 729 271 60 50 chr10 67113306 67113689 -78475599 + L1ME LINE L1 5378 5764 -357 403 299 66 19 chr10 67113793 67114069 -78475219 + L1ME4a LINE L1 5611 5916 -205 279 169 0 17 chr10 67114107 67114166 -78475122 + L1ME4a LINE L1 6060 6117 -4 258 336 94 7 chr10 67114914 67115063 -78474225 - MIR SINE MIR -90 172 11 225 196 0 0 chr10 67115110 67115161 -78474127 + GA-rich Low_complexity Low_complexity 2 52 0 193 29 29 29 chr10 67115625 67115660 -78473628 + (TTTTTG)n Simple_repeat Simple_repeat 6 40 0 210 225 0 0 chr10 67116463 67116503 -78472785 + C-rich Low_complexity Low_complexity 2 41 0 210 105 0 0 chr10 67116821 67116859 -78472429 + (T)n Simple_repeat Simple_repeat 1 38 0 2318 94 0 0 chr10 67116873 67117159 -78472129 + AluSx SINE Alu 2 287 -25 2052 139 0 0 chr10 67117853 67118141 -78471147 - AluSx SINE Alu -16 296 9 789 168 95 95 chr10 67118302 67118570 -78470718 + MLT1B LTR MaLR 1 228 -162 567 118 0 0 chr10 67218610 67218695 -78370593 - AluJ/FLAM SINE Alu -226 86 2 46 62 0 0 chr10 67218753 67218834 -78370454 + AT_rich Low_complexity Low_complexity 1 81 0 314 298 30 0 chr10 67218839 67218970 -78370318 - L1M4 LINE L1 -1070 5076 4942 233 232 0 0 chr10 67219257 67219313 -78369975 + (TA)n Simple_repeat Simple_repeat 1 56 0 2383 101 0 0 chr10 67219505 67219803 -78369485 - AluSx SINE Alu -13 299 2 2367 88 3 3 chr10 67220769 67221065 -78368223 - AluSx SINE Alu -16 296 1 669 278 160 6 chr10 67221067 67221423 -78367865 + L1ME3A LINE L1 5386 5796 -374 251 241 310 7 chr10 67221436 67221581 -78367707 + MER5A DNA MER1_type 1 189 0 540 285 98 11 chr10 67221606 67221880 -78367408 + L1ME3A LINE L1 5851 6148 -22 488 274 69 29 chr10 67221943 67222188 -78367100 + L1MC/D LINE L1 2901 3155 -2991 1136 264 91 19 chr10 67223062 67223628 -78365660 + L1MC/D LINE L1 5209 5823 -779 1375 183 9 99 chr10 67223634 67223957 -78365331 + AluSx SINE Alu 6 299 -13 1722 143 35 41 chr10 67225011 67225325 -78363963 + AluJo SINE Alu 1 312 0 238 293 222 13 chr10 67226614 67226853 -78362435 + L2 LINE L2 3025 3313 0 311 352 74 6 chr10 67226977 67227139 -78362149 - MIR SINE MIR -25 237 65 23 33 0 0 chr10 67227291 67227321 -78361967 + AT_rich Low_complexity Low_complexity 1 30 0 507 211 18 0 chr10 67231237 67231346 -78357942 - MER5B DNA MER1_type -58 120 10 505 211 117 8 chr10 67231762 67231890 -78357398 + MER31B LTR ERV1 1 142 -324 1979 136 14 10 chr10 67231892 67232187 -78357101 + AluSx SINE Alu 1 296 -16 478 245 93 0 chr10 67232333 67232472 -78356816 - MIR SINE MIR -51 211 60 3761 99 2 6 chr10 67232989 67233502 -78355786 + MER9 LTR ERVK 1 511 0 194 333 48 0 chr10 67233706 67233811 -78355477 - L2 LINE L2 -517 2797 2688 406 138 0 0 chr10 67234017 67234075 -78355213 - Alu SINE Alu -15 295 238 4294 141 19 63 chr10 67234075 67234194 -78355094 - LTR61-int LTR ERV1 -985 5346 5223 2156 112 0 7 chr10 67234194 67234481 -78354807 - AluSg1 SINE Alu -14 295 11 4294 141 19 63 chr10 67234481 67234841 -78354447 - LTR61-int LTR ERV1 -1108 5223 4849 2316 101 10 0 chr10 67234841 67235139 -78354149 + AluSq SINE Alu 1 301 -12 4294 141 19 63 chr10 67235139 67235325 -78353963 - LTR61-int LTR ERV1 -1482 4849 4787 2189 102 158 13 chr10 67235325 67235699 -78353589 + MSTA LTR MaLR 1 428 0 4294 141 19 63 chr10 67235699 67235911 -78353377 - LTR61-int LTR ERV1 -1544 4787 4567 323 197 14 0 chr10 67235911 67235982 -78353306 - LTR61-int LTR ERV1 -1945 4386 4315 1722 154 21 7 chr10 67236787 67237066 -78352222 + AluJb SINE Alu 6 288 -24 12644 195 29 2 chr10 67237167 67239359 -78349929 - LTR61-int LTR ERV1 -5859 2567 317 2222 171 5 18 chr10 67239382 67239779 -78349509 - LTR61-int LTR ERV1 -8033 393 2 1937 169 128 56 chr10 67239779 67240334 -78348954 - LTR61 LTR ERV1 0 595 1 674 244 50 0 chr10 67240359 67240539 -78348749 - L1M1 LINE L1 -4434 3131 2943 1733 170 24 3 chr10 67240542 67240709 -78348579 - AluJb SINE Alu -18 294 117 209 57 29 0 chr10 67240709 67240744 -78348544 + (TTTTA)n Simple_repeat Simple_repeat 3 38 0 1733 170 24 3 chr10 67240744 67240864 -78348424 - AluJb SINE Alu -195 117 1 1036 176 37 5 chr10 67240916 67241104 -78348184 + AluJb SINE Alu 87 280 -32 225 0 0 0 chr10 67241261 67241286 -78348002 + (T)n Simple_repeat Simple_repeat 1 25 0 1065 98 0 0 chr10 67241286 67241419 -78347869 - AluSq/x SINE Alu -180 133 1 603 244 325 15 chr10 67241420 67241878 -78347410 - L1M4 LINE L1 -816 5330 4731 2222 88 0 30 chr10 67241881 67242178 -78347110 + AluSx SINE Alu 21 308 -4 1996 233 161 17 chr10 67242362 67242495 -78346793 - L1M4 LINE L1 -1833 4313 4200 1817 160 3 17 chr10 67242495 67242789 -78346499 - AluJo SINE Alu -22 290 1 1996 233 161 17 chr10 67242789 67243968 -78345320 - L1M4 LINE L1 -1946 4200 2623 1667 190 17 0 chr10 67243968 67244258 -78345030 + AluJo SINE Alu 1 295 -17 1996 233 161 17 chr10 67244258 67244457 -78344831 - L1M4 LINE L1 -3523 2623 2454 253 246 16 0 chr10 67244509 67244570 -78344718 - HAL1 LINE L1 -1811 696 635 890 155 6 42 chr10 67245070 67245238 -78344050 - AluJb SINE Alu -121 191 30 2047 150 0 0 chr10 67247692 67247985 -78341303 - AluSx SINE Alu -19 293 1 195 381 63 16 chr10 67248654 67248906 -78340382 - L2 LINE L2 -832 2482 2219 198 0 0 0 chr10 67248908 67248930 -78340358 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 299 56 0 0 chr10 67249217 67249253 -78340035 + LTR24C LTR ERV1 519 554 -81 474 260 189 26 chr10 67250291 67250571 -78338717 + HAL1 LINE L1 1083 1316 -1191 300 27 0 0 chr10 67250571 67250608 -78338680 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 474 260 189 26 chr10 67250608 67250823 -78338465 + HAL1 LINE L1 1316 1659 -848 753 181 31 0 chr10 67250939 67251066 -78338222 + FLAM_C SINE Alu 2 132 -11 22 0 0 0 chr10 67251157 67251179 -78338109 + AT_rich Low_complexity Low_complexity 1 22 0 277 223 32 32 chr10 67251339 67251433 -78337855 + HAL1 LINE L1 2228 2321 -186 273 305 12 0 chr10 67251445 67251527 -78337761 + L1MC/D LINE L1 5420 5502 -2306 2157 125 0 3 chr10 67252269 67252574 -78336714 + AluSx SINE Alu 1 304 -8 1115 146 0 0 chr10 67253038 67253202 -78336086 - AluSg/x SINE Alu -20 292 129 252 291 43 26 chr10 67253311 67253428 -78335860 + L2 LINE L2 2915 3033 -239 1884 115 48 24 chr10 67253770 67254065 -78335223 - AluJb SINE Alu -10 302 1 633 175 39 71 chr10 67254249 67254316 -78334972 + MER106B DNA MER1_type 1 69 -990 2429 95 0 0 chr10 67254316 67254620 -78334668 - AluSx SINE Alu -8 304 1 633 175 39 71 chr10 67254620 67254706 -78334582 + MER106B DNA MER1_type 69 149 -910 1907 85 0 4 chr10 67254834 67255081 -78334207 + AluSg/x SINE Alu 65 310 0 1662 176 17 0 chr10 67255533 67255822 -78333466 - AluJb SINE Alu -18 294 1 241 77 51 0 chr10 67255852 67255891 -78333397 + MER116 DNA Mariner 39 79 -1 600 271 68 8 chr10 67255904 67256170 -78333118 - L1ME4a LINE L1 -264 5857 5576 1094 104 0 83 chr10 67256184 67256338 -78332950 + AluSg/x SINE Alu 137 274 -38 243 0 0 0 chr10 67256338 67256365 -78332923 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1094 104 0 83 chr10 67256365 67256402 -78332886 + AluSg/x SINE Alu 274 312 0 565 266 126 84 chr10 67257867 67258004 -78331284 + L2 LINE L2 2196 2326 -988 1816 103 0 0 chr10 67258004 67258237 -78331051 + AluSx SINE Alu 1 233 -79 565 266 126 84 chr10 67258237 67258726 -78330562 + L2 LINE L2 2326 2848 -466 490 342 51 29 chr10 67258794 67259110 -78330178 + L2 LINE L2 2988 3310 -3 333 141 0 31 chr10 67259150 67259214 -78330074 - MER5C DNA MER1_type 0 324 263 205 344 21 21 chr10 67259705 67259801 -78329487 + L2 LINE L2 1528 1623 -1691 2126 121 7 0 chr10 67260803 67261093 -78328195 - AluSx SINE Alu -20 292 1 314 314 0 0 chr10 67261188 67261290 -78327998 - MIR3 SINE MIR -25 183 82 287 213 161 92 chr10 67264163 67264412 -78324876 - L2 LINE L2 -1 3312 3047 1897 228 41 22 chr10 67264637 67265129 -78324159 - MLT1D LTR MaLR 0 505 5 1650 251 105 74 chr10 67265278 67265668 -78323620 + L2 LINE L2 962 1339 -1975 1599 160 4 15 chr10 67265668 67265930 -78323358 - AluJb SINE Alu -53 259 1 1650 251 105 74 chr10 67265930 67266386 -78322902 + L2 LINE L2 1339 1834 -1480 22 35 0 0 chr10 67266404 67266433 -78322855 + AT_rich Low_complexity Low_complexity 1 29 0 15083 164 21 41 chr10 67266433 67266684 -78322604 - L1MA4 LINE L1 -11 7708 7454 1933 122 49 75 chr10 67266684 67267069 -78322219 + THE1C LTR MaLR 1 375 0 15083 164 21 41 chr10 67267069 67268571 -78320717 - L1MA4 LINE L1 -265 7454 5924 2166 123 3 3 chr10 67268571 67268871 -78320417 - AluSx SINE Alu -12 300 1 15083 164 21 41 chr10 67268871 67270452 -78318836 - L1MA4 LINE L1 -1795 5924 4313 1853 179 3 3 chr10 67270452 67270759 -78318529 - AluJb SINE Alu -5 307 1 15083 164 21 41 chr10 67270759 67271029 -78318259 - L1MA4 LINE L1 -3406 4313 4039 1942 168 3 0 chr10 67271029 67271338 -78317950 - AluJb SINE Alu -2 310 1 15083 164 21 41 chr10 67271338 67271365 -78317923 - L1MA4 LINE L1 -3680 4039 4013 2237 117 3 0 chr10 67271365 67271663 -78317625 + AluSx SINE Alu 1 299 -13 15083 164 21 41 chr10 67271663 67272670 -78316618 - L1MA4 LINE L1 -3706 4013 3162 686 60 60 0 chr10 67272687 67272787 -78316501 - LTR61 LTR ERV1 0 595 490 16175 194 35 16 chr10 67272787 67272997 -78316291 - HERV3 LTR ERV1 -897 7529 7324 1903 110 68 0 chr10 67272997 67273281 -78316007 - AluSp SINE Alu 0 302 1 16175 194 35 16 chr10 67273281 67276073 -78313215 - HERV3 LTR ERV1 -1102 7324 4471 594 132 11 0 chr10 67276088 67276179 -78313109 + MER9 LTR ERVK 40 131 -380 32070 90 3 1 chr10 67276181 67280333 -78308955 + HERVK9 LTR ERVK 1474 5634 -282 2184 84 17 0 chr10 67280418 67280705 -78308583 + HERVK9 LTR ERVK 5635 5913 -3 3266 137 8 6 chr10 67280710 67281220 -78308068 + MER9 LTR ERVK 1 511 0 11836 186 8 16 chr10 67281220 67283181 -78306107 - HERV3 LTR ERV1 -3951 4475 2531 702 48 0 0 chr10 67283281 67283365 -78305923 - AluSg SINE Alu -225 85 2 1867 166 0 0 chr10 67283930 67284237 -78305051 - AluSx SINE Alu -4 308 2 255 231 16 116 chr10 67284435 67284500 -78304788 + Charlie5 DNA MER1_type 4 53 -2571 2076 98 0 7 chr10 67284500 67284796 -78304492 + AluSc SINE Alu 1 294 -15 255 231 16 116 chr10 67284796 67284851 -78304437 + Charlie5 DNA MER1_type 53 112 -2512 1878 134 0 0 chr10 67284871 67285154 -78304134 + AluSx SINE Alu 21 303 -9 1386 186 48 21 chr10 67285155 67285445 -78303843 - L1M3 LINE L1 -385 5798 5501 497 47 12 106 chr10 67285461 67285485 -78303803 + Charlie5 DNA MER1_type 2236 2261 -363 2263 86 0 10 chr10 67285485 67285787 -78303501 - AluSq SINE Alu -14 299 1 497 47 12 106 chr10 67285787 67285847 -78303441 + Charlie5 DNA MER1_type 2261 2312 -312 2093 119 0 0 chr10 67285849 67286143 -78303145 - AluSc SINE Alu -15 294 1 1235 174 9 121 chr10 67286149 67286339 -78302949 - AluJo SINE Alu 0 302 92 2136 99 3 0 chr10 67286339 67286632 -78302656 + AluSp SINE Alu 1 294 -19 1235 174 9 121 chr10 67286632 67286643 -78302645 - AluJo SINE Alu -210 92 81 2089 118 3 0 chr10 67286643 67286939 -78302349 + AluSx SINE Alu 1 297 -15 1235 174 9 121 chr10 67286939 67287076 -78302212 - AluJo SINE Alu -221 81 1 207 100 0 0 chr10 67287085 67287115 -78302173 + (T)n Simple_repeat Simple_repeat 1 30 0 2623 142 65 5 chr10 67287115 67287558 -78301730 + Tigger1 DNA MER2_type 122 591 -1827 1228 120 5 5 chr10 67287559 67287751 -78301537 - AluSg/x SINE Alu -1 311 120 3207 44 8 0 chr10 67287769 67288153 -78301135 - SVA Other Other -11 1375 989 724 114 0 0 chr10 67288256 67288361 -78300927 + AluSg/x SINE Alu 191 295 -17 1763 116 9 113 chr10 67288592 67288929 -78300359 - AluSx SINE Alu 0 302 1 2191 109 6 10 chr10 67288944 67289257 -78300031 - AluSx SINE Alu 0 312 1 2112 115 3 3 chr10 67289259 67289572 -78299716 - AluSp SINE Alu 0 313 1 644 160 30 0 chr10 67289605 67289705 -78299583 - FLAM_C SINE Alu -32 111 9 2398 58 0 0 chr10 67290100 67290394 -78298894 + AluY SINE Alu 1 294 -17 1275 141 33 48 chr10 67290619 67290835 -78298453 - Tigger6 DNA MER2_type -16 1581 1368 2087 134 0 6 chr10 67290835 67291149 -78298139 + AluSx SINE Alu 1 312 0 1275 141 33 48 chr10 67291149 67291202 -78298086 - Tigger6 DNA MER2_type -229 1368 1316 1347 200 107 0 chr10 67291213 67291503 -78297785 - Tigger6 DNA MER2_type -1276 321 1 810 93 9 0 chr10 67291705 67291813 -78297475 + AluSc SINE Alu 1 109 -200 1449 133 62 8 chr10 67291968 67292224 -78297064 + L1MB3 LINE L1 5559 5828 -355 1511 159 0 98 chr10 67292227 67292388 -78296900 + AluJo SINE Alu 1 115 -197 2212 89 0 7 chr10 67292388 67292679 -78296609 + AluSg SINE Alu 1 289 -21 1511 159 0 98 chr10 67292679 67292843 -78296445 + AluJo SINE Alu 115 294 -18 1009 78 0 0 chr10 67292849 67292978 -78296310 + AluSq/x SINE Alu 1 129 -184 2172 105 0 3 chr10 67292978 67293291 -78295997 + AluSx SINE Alu 1 312 0 1212 176 30 7 chr10 67293428 67293766 -78295522 + MER74C LTR ERVL 13 437 -121 1624 132 13 36 chr10 67293809 67294112 -78295176 + AluSx SINE Alu 8 303 -9 1945 150 0 7 chr10 67294178 67294484 -78294804 - AluSx SINE Alu -8 304 1 2289 76 0 0 chr10 67294617 67294906 -78294382 - AluY SINE Alu -22 289 1 1507 104 142 8 chr10 67294914 67295182 -78294106 - L1MA5A LINE L1 -5 6292 5989 1621 155 3 23 chr10 67295190 67295499 -78293789 - AluJo SINE Alu -9 303 1 985 93 19 25 chr10 67295499 67295661 -78293627 - AluJb SINE Alu -8 304 144 23 33 0 0 chr10 67295948 67295978 -78293310 + GC_rich Low_complexity Low_complexity 1 30 0 1436 133 61 14 chr10 67296041 67296320 -78292968 - AluJb SINE Alu -20 292 1 259 158 26 26 chr10 67296809 67296885 -78292403 + L1ME4a LINE L1 5933 6008 -113 1684 174 7 3 chr10 67297198 67297497 -78291791 + AluJo SINE Alu 1 300 -12 1967 137 0 9 chr10 67297569 67297884 -78291404 + AluSx SINE Alu 1 312 0 608 13 26 0 chr10 67297982 67298058 -78291230 + (TCTCCC)n Simple_repeat Simple_repeat 4 81 0 3736 39 7 0 chr10 67298058 67298520 -78290768 + SVA Other Other 71 535 -851 1742 14 0 29 chr10 67298547 67298755 -78290533 + SVA Other Other 1179 1380 -6 23 0 0 0 chr10 67298755 67298778 -78290510 + AT_rich Low_complexity Low_complexity 1 23 0 1132 81 0 7 chr10 67299078 67299226 -78290062 + AluSp SINE Alu 1 147 -166 321 291 8 0 chr10 67299301 67299418 -78289870 - AluSp/q SINE Alu -3 300 183 18947 53 1 14 chr10 67299683 67302100 -78287188 + L1PA6 LINE L1 2939 5348 -806 1968 83 62 24 chr10 67302100 67302388 -78286900 + AluY SINE Alu 3 301 -10 18947 53 1 14 chr10 67302388 67303184 -78286104 + L1PA6 LINE L1 5348 6153 -1 385 183 103 48 chr10 67303260 67303365 -78285923 - AluJ/FLAM SINE Alu -207 95 3 2399 63 0 7 chr10 67304086 67304389 -78284899 - AluY SINE Alu -10 301 1 322 228 0 0 chr10 67304475 67304532 -78284756 + Cheshire DNA MER1_type 1 57 -2363 195 42 0 0 chr10 67304596 67304620 -78284668 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 2026 128 7 0 chr10 67307591 67307896 -78281392 - AluSq SINE Alu -2 311 5 940 130 0 0 chr10 67307986 67308117 -78281171 - AluSq/x SINE Alu -181 131 1 304 238 24 48 chr10 67308461 67308545 -78280743 + L1MC4 LINE L1 6640 6721 -1321 2721 233 33 6 chr10 67308630 67309264 -78280024 - MER82 DNA MER2_type 0 653 3 194 214 0 24 chr10 67309885 67309927 -78279361 - MER5A DNA MER1_type -19 170 130 210 259 0 0 chr10 67310350 67310404 -78278884 - MIR SINE MIR -30 232 179 1979 132 3 0 chr10 67310587 67310882 -78278406 + AluSg SINE Alu 1 296 -14 681 190 0 0 chr10 67311146 67311262 -78278026 + FLAM_A SINE Alu 10 125 -17 5181 189 120 10 chr10 67311904 67312932 -78276356 - HERVL74 LTR ERVL -2444 3241 2101 1474 177 20 0 chr10 67313095 67313343 -78275945 - HERVL74 LTR ERVL -3587 2098 1846 3020 68 35 55 chr10 67313343 67313796 -78275492 + MLT2A1 LTR ERVL 1 444 0 40468 83 18 16 chr10 67313796 67314143 -78275145 + HERVL-A1 LTR ERVL 1 346 -5308 1946 93 17 33 chr10 67314143 67314443 -78274845 + AluSc SINE Alu 1 295 -14 40468 83 18 16 chr10 67314443 67315788 -78273500 + HERVL-A1 LTR ERVL 346 1686 -3968 2026 126 0 13 chr10 67315788 67316098 -78273190 + AluSx SINE Alu 7 312 0 40468 83 18 16 chr10 67316098 67316964 -78272324 + HERVL-A1 LTR ERVL 1686 2548 -3106 225 271 73 80 chr10 67316964 67317115 -78272173 + L2 LINE L2 1886 2035 -1279 40468 83 18 16 chr10 67317115 67319378 -78269910 + HERVL-A1 LTR ERVL 2548 4992 -662 2359 83 0 0 chr10 67319378 67319679 -78269609 + AluSg SINE Alu 1 301 -9 40468 83 18 16 chr10 67319679 67320344 -78268944 + HERVL-A1 LTR ERVL 4992 5654 0 2993 85 41 23 chr10 67320344 67320741 -78268547 + MLT2A1 LTR ERVL 1 408 -36 216 0 0 0 chr10 67320741 67320765 -78268523 + (TA)n Simple_repeat Simple_repeat 2 25 0 2993 85 41 23 chr10 67320765 67320803 -78268485 + MLT2A1 LTR ERVL 408 444 0 2029 172 133 47 chr10 67320803 67321014 -78268274 - HERVL74 LTR ERVL -3835 1850 1659 1610 165 49 0 chr10 67321014 67321299 -78267989 - AluSx SINE Alu -13 299 1 2029 172 133 47 chr10 67321299 67321347 -78267941 - HERVL74 LTR ERVL -4026 1659 1617 1970 90 0 115 chr10 67321347 67321697 -78267591 - AluSq SINE Alu 0 313 1 2029 172 133 47 chr10 67321697 67321923 -78267365 - HERVL74 LTR ERVL -4068 1617 1321 903 194 5 48 chr10 67321927 67322113 -78267175 - HERVL74 LTR ERVL -2603 953 776 311 274 0 0 chr10 67322176 67322249 -78267039 + tRNA-Met-i tRNA tRNA 1 73 -2 1866 199 47 35 chr10 67323356 67323692 -78265596 - LTR53 LTR ERVL -11 508 163 1622 154 37 0 chr10 67323692 67323992 -78265296 - AluJo SINE Alu 0 310 1 1866 199 47 35 chr10 67323992 67324082 -78265206 - LTR53 LTR ERVL -356 163 76 698 196 223 97 chr10 67324096 67324281 -78265007 + L1M4c LINE L1 1714 1874 -4510 2077 134 3 0 chr10 67324281 67324587 -78264701 + AluSq SINE Alu 1 307 -6 698 196 223 97 chr10 67324587 67324641 -78264647 + L1M4c LINE L1 1874 1920 -4464 2191 108 0 0 chr10 67324641 67324936 -78264352 + AluSg SINE Alu 1 295 -15 698 196 223 97 chr10 67324936 67325040 -78264248 + L1M4c LINE L1 1920 2009 -4375 1076 175 0 0 chr10 67325040 67325206 -78264082 + FAM SINE Alu 1 166 -9 698 196 223 97 chr10 67325206 67325218 -78264070 + L1M4c LINE L1 2009 2018 -4366 1773 131 44 3 chr10 67325218 67325515 -78263773 + AluSq SINE Alu 1 309 -4 698 196 223 97 chr10 67325515 67325630 -78263658 + L1M4c LINE L1 2018 2117 -4267 2215 99 0 10 chr10 67325630 67325942 -78263346 + AluSg SINE Alu 2 310 0 698 196 223 97 chr10 67325942 67326068 -78263220 + L1M4c LINE L1 2117 2390 -3994 5514 121 118 20 chr10 67326068 67326322 -78262966 - Tigger3b DNA MER2_type -1797 1231 1003 1913 141 0 7 chr10 67326322 67326628 -78262660 + AluJb SINE Alu 7 310 -2 5514 121 118 20 chr10 67326628 67327175 -78262113 - Tigger3b DNA MER2_type -2025 1003 310 1850 160 10 0 chr10 67327175 67327475 -78261813 - AluJb SINE Alu -9 303 1 5514 121 118 20 chr10 67327475 67327673 -78261615 - Tigger3b DNA MER2_type -2718 310 133 4788 39 18 0 chr10 67327688 67328255 -78261033 - L1PA5 LINE L1 0 6154 5578 398 163 22 0 chr10 67328264 67328356 -78260932 - L1M4 LINE L1 -1658 4488 4395 409 262 0 0 chr10 67328356 67328440 -78260848 + AluJ/FRAM SINE Alu 219 302 0 * 2918 131 54 28 chr10 67328437 67328458 -78260830 + Tigger3(Golem) DNA MER2_type 2480 2499 -529 2126 127 0 7 chr10 67328458 67328766 -78260522 - AluSx SINE Alu -6 306 1 2918 131 54 28 chr10 67328766 67329279 -78260009 + Tigger3(Golem) DNA MER2_type 2499 3028 0 1624 173 3 26 chr10 67329414 67329721 -78259567 + AluJb SINE Alu 1 300 -12 713 142 0 0 chr10 67329776 67329882 -78259406 - FRAM SINE Alu -9 167 62 879 143 8 0 chr10 67329913 67330046 -78259242 + AluJo SINE Alu 1 134 -178 2024 88 40 0 chr10 67330048 67330346 -78258942 + AluSx SINE Alu 1 309 0 1214 211 4 0 chr10 67330447 67330684 -78258604 - AluJb SINE Alu -5 307 70 763 187 0 0 chr10 67330684 67330818 -78258470 + AluJb SINE Alu 179 312 0 398 277 35 111 chr10 67330835 67331124 -78258164 - L1MEc LINE L1 -4099 2297 2031 2260 58 0 0 chr10 67331265 67331541 -78257747 - AluY SINE Alu -14 297 22 1801 153 0 0 chr10 67331652 67331934 -78257354 - AluSx SINE Alu -30 282 1 23 54 0 0 chr10 67333005 67333042 -78256246 + AT_rich Low_complexity Low_complexity 1 37 0 642 190 15 95 chr10 67333045 67333221 -78256067 - MLT1A1 LTR MaLR -50 315 155 468 62 0 62 chr10 67333221 67333302 -78255986 - L1PA13 LINE L1 -2 6161 6086 642 190 15 95 chr10 67333302 67333325 -78255963 - MLT1A1 LTR MaLR -210 155 132 223 244 111 82 chr10 67333542 67333677 -78255611 - L2 LINE L2 0 3313 3175 569 280 100 35 chr10 67333788 67334049 -78255239 - L2 LINE L2 -562 2752 2475 2408 57 0 0 chr10 67334076 67334373 -78254915 + AluY SINE Alu 1 297 -14 195 42 0 0 chr10 67334374 67334398 -78254890 + (TA)n Simple_repeat Simple_repeat 2 25 0 35 0 0 0 chr10 67334470 67334505 -78254783 + AT_rich Low_complexity Low_complexity 1 35 0 787 80 0 18 chr10 67334506 67334618 -78254670 - AluSg/x SINE Alu -2 308 199 21 0 0 0 chr10 67334644 67334665 -78254623 + AT_rich Low_complexity Low_complexity 1 21 0 201 74 0 0 chr10 67334665 67334692 -78254596 + (T)n Simple_repeat Simple_repeat 1 27 0 851 200 0 0 chr10 67334868 67335028 -78254260 - AluJb SINE Alu -13 299 140 1158 309 188 29 chr10 67335133 67335842 -78253446 - L2 LINE L2 -340 2974 2128 4846 158 98 42 chr10 67335842 67336807 -78252481 + LTR28 LTR ERV1 1 1020 0 1158 309 188 29 chr10 67336807 67336881 -78252407 - L2 LINE L2 -1186 2128 2067 1191 115 39 43 chr10 67336899 67337107 -78252181 + AluJb SINE Alu 93 299 -13 1519 168 3 30 chr10 67337118 67337248 -78252040 + AluJb SINE Alu 7 139 -173 2193 93 3 7 chr10 67337248 67337550 -78251738 + AluSp SINE Alu 3 303 -10 1519 168 3 30 chr10 67337550 67337716 -78251572 + AluJb SINE Alu 139 295 -17 319 136 68 0 chr10 67337723 67337782 -78251506 - L2 LINE L2 -1266 2048 1986 1068 131 25 160 chr10 67337788 67337966 -78251322 - Tigger1 DNA MER2_type 0 2418 2218 1718 132 0 11 chr10 67337966 67338231 -78251057 - AluSx SINE Alu -17 295 34 1068 131 25 160 chr10 67338231 67338290 -78250998 - Tigger1 DNA MER2_type -200 2218 2153 691 186 7 64 chr10 67338290 67338430 -78250858 + FLAM_C SINE Alu 1 132 -1 2068 106 13 0 chr10 67338438 67338741 -78250547 + AluSx SINE Alu 1 307 -5 1068 131 25 160 chr10 67338741 67338775 -78250513 - Tigger1 DNA MER2_type -206 2212 2175 339 382 39 23 chr10 67339033 67339342 -78249946 + L2 LINE L2 2175 2488 -826 629 192 16 0 chr10 67339399 67339524 -78249764 - Cheshire DNA MER1_type 0 2420 2294 241 26 53 0 chr10 67339525 67339563 -78249725 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 826 184 5 65 chr10 67339576 67339777 -78249511 - AluJb SINE Alu -37 275 87 1348 157 39 18 chr10 67339783 67340048 -78249240 - Cheshire DNA MER1_type -127 2293 2019 1901 73 0 8 chr10 67340048 67340334 -78248954 - AluY SINE Alu 0 319 36 1348 157 39 18 chr10 67340334 67340347 -78248941 - Cheshire DNA MER1_type -401 2019 2008 797 217 74 86 chr10 67340352 67340565 -78248723 - L1MA9 LINE L1 -30 6282 6073 2154 109 3 0 chr10 67340565 67340876 -78248412 + AluSp SINE Alu 1 312 -1 797 217 74 86 chr10 67340876 67341012 -78248276 - L1MA9 LINE L1 -239 6073 5937 1760 153 24 0 chr10 67341031 67341326 -78247962 + AluJb SINE Alu 3 304 -8 270 0 0 0 chr10 67341326 67341356 -78247932 + (TA)n Simple_repeat Simple_repeat 2 31 0 481 170 132 0 chr10 67341385 67341491 -78247797 - Cheshire DNA MER1_type -1909 511 392 1036 175 0 0 chr10 67341494 67341677 -78247611 + AluSg/x SINE Alu 130 312 0 1330 184 111 58 chr10 67341686 67342045 -78247243 - Cheshire DNA MER1_type -2042 378 1 1559 102 94 62 chr10 67342282 67342557 -78246731 + AluSg SINE Alu 1 284 -26 1274 219 54 3 chr10 67342597 67342948 -78246340 - Looper DNA T2_type -1041 517 149 613 217 8 0 chr10 67342958 67343078 -78246210 + FLAM_C SINE Alu 2 122 -21 225 180 33 16 chr10 67343096 67343157 -78246131 - L1MCa LINE L1 -4358 2068 2007 23 0 0 0 chr10 67343171 67343194 -78246094 + AT_rich Low_complexity Low_complexity 1 23 0 444 99 12 25 chr10 67343245 67343326 -78245962 + Alu SINE Alu 231 310 -1 248 143 0 0 chr10 67343326 67343368 -78245920 - Looper DNA T2_type -1494 64 23 363 333 29 75 chr10 67343403 67343484 -78245804 - L1MEc LINE L1 -3989 2407 2324 1488 185 17 14 chr10 67343484 67343646 -78245642 - AluJo SINE Alu -13 299 134 2199 89 7 3 chr10 67343646 67343948 -78245340 - AluSp SINE Alu -10 303 1 1488 185 17 14 chr10 67343948 67344077 -78245211 - AluJo SINE Alu -178 134 7 363 333 29 75 chr10 67344077 67344245 -78245043 - L1MEc LINE L1 -4072 2324 2180 2053 124 7 0 chr10 67344245 67344551 -78244737 - AluSq SINE Alu -5 308 1 363 333 29 75 chr10 67344551 67344685 -78244603 - L1MEc LINE L1 -4216 2180 2041 1702 164 13 10 chr10 67344726 67345036 -78244252 + AluSx SINE Alu 1 311 -1 469 301 100 21 chr10 67345131 67345370 -78243918 + L2 LINE L2 2282 2539 -775 1753 158 17 0 chr10 67346695 67346986 -78242302 - AluJb SINE Alu -16 296 1 1954 119 7 0 chr10 67347028 67347305 -78241983 + MER61C LTR ERV1 1 279 -155 24 32 0 0 chr10 67347306 67347337 -78241951 + AT_rich Low_complexity Low_complexity 1 31 0 2086 130 0 0 chr10 67347341 67347640 -78241648 + AluSx SINE Alu 1 299 -13 1316 181 45 21 chr10 67347643 67347787 -78241501 - AluJo SINE Alu -18 294 155 1694 124 31 8 chr10 67347787 67348046 -78241242 - AluSx SINE Alu -47 265 1 1628 201 0 3 chr10 67348051 67348345 -78240943 - AluJb SINE Alu -18 294 2 1316 181 45 21 chr10 67348345 67348481 -78240807 - AluJo SINE Alu -160 152 1 1175 77 0 0 chr10 67348556 67348711 -78240577 + AluY SINE Alu 151 305 -6 1076 96 169 11 chr10 67348845 67349023 -78240265 + AluSq SINE Alu 2 207 -106 711 93 9 19 chr10 67349157 67349265 -78240023 + AluSc SINE Alu 190 296 -13 466 152 0 189 chr10 67349269 67349401 -78239887 - Tigger1 DNA MER2_type -2311 107 1 610 155 0 0 chr10 67349478 67349575 -78239713 + AluSg/x SINE Alu 205 301 -9 187 200 200 31 chr10 67349604 67349669 -78239619 - L2 LINE L2 -1357 1957 1882 271 256 85 88 chr10 67349909 67350102 -78239186 + L1M4 LINE L1 3474 3666 -2480 1827 159 0 13 chr10 67350102 67350411 -78238877 + AluJo SINE Alu 1 305 -7 2194 108 0 0 chr10 67350416 67350713 -78238575 + AluSq SINE Alu 1 297 -16 271 256 85 88 chr10 67350713 67350729 -78238559 + L1M4 LINE L1 3670 3685 -2461 1811 149 3 7 chr10 67350729 67351025 -78238263 + AluSx SINE Alu 1 295 -17 271 256 85 88 chr10 67351025 67351048 -78238240 + L1M4 LINE L1 3685 3707 -2439 1986 123 33 3 chr10 67351048 67351350 -78237938 + AluSq SINE Alu 1 311 -2 271 256 85 88 chr10 67351350 67351484 -78237804 + L1M4 LINE L1 3707 3847 -2299 2279 66 0 3 chr10 67351621 67351942 -78237346 + AluY SINE Alu 1 320 0 863 196 128 0 chr10 67351947 67352126 -78237162 + AluJb SINE Alu 86 287 -25 1880 134 0 0 chr10 67352181 67352456 -78236832 + AluSx SINE Alu 1 275 -37 222 37 0 0 chr10 67352462 67352489 -78236799 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 607 135 34 81 chr10 67353130 67353278 -78236010 + MER4A LTR ERV1 2 142 -522 1615 118 22 89 chr10 67353278 67353593 -78235695 + MER4A LTR ERV1 371 664 0 322 91 0 0 chr10 67353598 67353642 -78235646 - U7 snRNA snRNA -15 48 5 2311 56 0 0 chr10 67353644 67353969 -78235319 - AluY SINE Alu 0 326 2 737 88 9 18 chr10 67354002 67354115 -78235173 - AluSg/x SINE Alu -13 297 186 2156 92 3 13 chr10 67354123 67354429 -78234859 - AluSg SINE Alu -1 309 7 188 0 74 0 chr10 67354435 67354462 -78234826 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 804 104 0 0 chr10 67354465 67354580 -78234708 - AluSg/x SINE Alu -30 280 166 2173 97 0 0 chr10 67354830 67355128 -78234160 + AluSx SINE Alu 1 298 -14 2136 60 7 10 chr10 67356400 67356699 -78232589 + AluY SINE Alu 1 298 -13 627 73 0 0 chr10 67356753 67356835 -78232453 - AluJ/FRAM SINE Alu -10 302 221 1907 121 6 29 chr10 67357360 67357674 -78231614 + AluSx SINE Alu 1 307 -5 30 27 0 0 chr10 67357749 67357786 -78231502 + AT_rich Low_complexity Low_complexity 1 37 0 1704 179 62 0 chr10 67357815 67358123 -78231165 + Tigger6a DNA MER2_type 1 327 -756 2727 137 38 87 chr10 67358140 67358717 -78230571 + MER67B LTR ERV1 1 549 -112 559 135 84 3 chr10 67358783 67358890 -78230398 + MER67B LTR ERV1 405 614 0 1533 213 38 35 chr10 67358898 67359050 -78230238 - LTR52 LTR ERVL -20 401 251 1139 143 209 39 chr10 67359050 67359308 -78229980 + AluJb SINE Alu 1 302 0 1533 213 38 35 chr10 67359308 67359550 -78229738 - LTR52 LTR ERVL -170 251 6 456 135 62 0 chr10 67359579 67359675 -78229613 + Tigger6a DNA MER2_type 344 445 -638 2261 79 3 0 chr10 67359846 67360138 -78229150 + AluSp SINE Alu 1 293 -20 2061 103 3 0 chr10 67360166 67360448 -78228840 + AluSq SINE Alu 1 283 -30 2072 87 7 0 chr10 67360475 67360779 -78228509 + AluSp SINE Alu 11 316 0 740 184 19 63 chr10 67360885 67361061 -78228227 - Charlie5 DNA MER1_type -193 2431 2249 2029 107 13 3 chr10 67361061 67361361 -78227927 + AluSx SINE Alu 1 303 -9 2044 107 0 13 chr10 67361363 67361661 -78227627 + AluSp SINE Alu 1 294 -19 740 184 19 63 chr10 67361661 67361688 -78227600 - Charlie5 DNA MER1_type -376 2248 2234 2094 107 3 0 chr10 67361732 67362032 -78227256 + AluSx SINE Alu 1 301 -11 1969 116 3 3 chr10 67362400 67362694 -78226594 - AluSx SINE Alu -18 294 1 914 173 12 0 chr10 67362694 67362862 -78226426 - AluJo/FRAM SINE Alu -7 305 136 1972 147 0 3 chr10 67362864 67363177 -78226111 - AluSx SINE Alu 0 312 1 395 159 0 0 chr10 67363197 67363260 -78226028 - Tigger2 DNA MER2_type -2655 63 1 2407 69 0 0 chr10 67363422 67363725 -78225563 + AluY SINE Alu 1 303 -8 2741 240 148 47 chr10 67363726 67364169 -78225119 + L1MEc LINE L1 128 525 -5588 2304 98 3 0 chr10 67364169 67364476 -78224812 + AluSx SINE Alu 1 308 -4 2741 240 148 47 chr10 67364476 67364504 -78224784 + L1MEc LINE L1 525 549 -5564 8555 62 19 133 chr10 67364504 67366092 -78223196 + SVA Other Other 8 1386 0 2741 240 148 47 chr10 67366092 67366437 -78222851 + L1MEc LINE L1 549 858 -5255 848 188 0 0 chr10 67366437 67366570 -78222718 + FLAM_C SINE Alu 1 133 0 2741 240 148 47 chr10 67366570 67366856 -78222432 + L1MEc LINE L1 858 1189 -4924 1490 154 32 14 chr10 67366856 67367164 -78222124 + AluJb SINE Alu 1 313 0 2741 240 148 47 chr10 67367164 67367197 -78222091 + L1MEc LINE L1 1189 1217 -4896 1261 221 47 7 chr10 67367274 67367572 -78221716 + L1MDa LINE L1 48 357 -6183 2159 80 0 13 chr10 67367573 67367872 -78221416 + AluSc SINE Alu 1 295 -14 726 168 0 56 chr10 67367907 67368050 -78221238 + FLAM_C SINE Alu 6 140 -3 2284 98 0 0 chr10 67368052 67368359 -78220929 + AluSx SINE Alu 1 307 -5 2218 99 0 3 chr10 67368362 67368664 -78220624 + AluSq SINE Alu 1 301 -12 364 189 92 30 chr10 67368665 67368829 -78220459 + L1M4 LINE L1 4264 4437 -1709 410 57 57 0 chr10 67368836 67368889 -78220399 - U6 snRNA snRNA -51 56 1 230 154 19 0 chr10 67368889 67368941 -78220347 + L1M4 LINE L1 4412 4464 -1682 1950 103 0 4 chr10 67368983 67369255 -78220033 + AluSg SINE Alu 1 271 -39 3134 206 45 0 chr10 67369533 67370175 -78219113 - MLT1B-int LTR MaLR -700 671 1 668 222 15 89 chr10 67370175 67370216 -78219072 - MLT1B LTR MaLR 0 390 348 1841 146 0 0 chr10 67370216 67370529 -78218759 + AluSx SINE Alu 1 313 0 668 222 15 89 chr10 67370529 67370688 -78218600 - MLT1B LTR MaLR -42 348 203 407 59 35 47 chr10 67370698 67370783 -78218505 + (TTCC)n Simple_repeat Simple_repeat 3 86 0 4654 73 19 9 chr10 67370783 67371886 -78217402 + MER11A LTR ERVK 1 1254 -12 351 77 0 0 chr10 67372067 67372119 -78217169 + AluSg SINE Alu 249 300 0 1618 169 11 0 chr10 67372119 67372392 -78216896 - AluSx SINE Alu -36 276 1 523 200 72 123 chr10 67372432 67372627 -78216661 - MLT1B LTR MaLR -189 185 1 2345 148 28 26 chr10 67373001 67373426 -78215862 + MSTB LTR MaLR 1 426 0 303 161 18 0 chr10 67373475 67373531 -78215757 + FAM SINE Alu 35 91 -84 1395 152 0 0 chr10 67373535 67373746 -78215542 - AluSx SINE Alu -101 211 1 327 320 60 48 chr10 67373776 67373852 -78215436 - L1ME4a LINE L1 -148 5973 5899 1908 119 0 51 chr10 67373852 67374163 -78215125 - AluSx SINE Alu -17 295 1 327 320 60 48 chr10 67374163 67374336 -78214952 - L1ME4a LINE L1 -222 5899 5721 1955 129 3 0 chr10 67374428 67374723 -78214565 + AluSx SINE Alu 1 296 -16 1516 152 47 37 chr10 67375086 67375382 -78213906 - AluJo SINE Alu -8 304 6 1182 118 0 0 chr10 67375481 67375650 -78213638 - AluSg/x SINE Alu -12 297 129 2234 103 0 0 chr10 67375651 67375961 -78213327 - AluY SINE Alu -1 310 1 5061 94 60 38 chr10 67376180 67377018 -78212270 + SVA Other Other 531 1386 0 1969 103 14 0 chr10 67377037 67377362 -78211926 + AluSq SINE Alu 1 329 0 835 176 33 0 chr10 67377602 67377755 -78211533 + FRAM SINE Alu 1 158 -18 25 0 0 0 chr10 67378315 67378340 -78210948 + AT_rich Low_complexity Low_complexity 1 25 0 529 217 96 0 chr10 67378340 67378455 -78210833 - FLAM_C SINE Alu -7 126 1 2184 75 0 4 chr10 67378655 67378935 -78210353 + AluY SINE Alu 1 279 -32 1614 167 24 7 chr10 67379180 67379474 -78209814 - AluJb SINE Alu -13 299 1 1668 137 53 47 chr10 67379483 67379652 -78209636 - AluSx SINE Alu -10 302 129 2036 127 7 0 chr10 67379652 67379951 -78209337 + AluSc SINE Alu 1 301 -8 1668 137 53 47 chr10 67379951 67380081 -78209207 - AluSx SINE Alu -183 129 1 308 241 9 46 chr10 67380412 67380520 -78208768 - L1ME1 LINE L1 -5 6161 6058 943 204 117 0 chr10 67380527 67380723 -78208565 - MER58A DNA MER1_type 0 224 6 4552 218 61 56 chr10 67380725 67381337 -78207951 - L1MD1 LINE L1 -167 6075 5468 2277 109 0 0 chr10 67381337 67381648 -78207640 - AluSx SINE Alu -1 311 1 4552 218 61 56 chr10 67381648 67381946 -78207342 - L1MD1 LINE L1 -774 5468 5173 1542 91 4 83 chr10 67381946 67382210 -78207078 - AluSx SINE Alu -28 284 42 4552 218 61 56 chr10 67382210 67383597 -78205691 - L1MD1 LINE L1 -1069 5173 3757 2327 102 3 0 chr10 67383597 67383892 -78205396 - AluSp SINE Alu -17 296 1 4552 218 61 56 chr10 67383892 67383954 -78205334 - L1MD1 LINE L1 -2485 3757 3697 483 202 48 0 chr10 67384090 67384194 -78205094 - L1M LINE L1 -743 5427 5319 2139 141 3 3 chr10 67384194 67384507 -78204781 - AluSp SINE Alu 0 313 1 2061 86 55 21 chr10 67384564 67384855 -78204433 - AluSg SINE Alu -9 301 1 35 0 0 0 chr10 67385141 67385176 -78204112 + GC_rich Low_complexity Low_complexity 1 35 0 317 143 18 0 chr10 67385277 67385333 -78203955 - AluS SINE Alu -243 57 1 * 3774 105 22 8 chr10 67385333 67385365 -78203923 + Tigger1 DNA MER2_type 1448 1478 -940 2329 123 0 0 chr10 67385365 67385674 -78203614 + AluSx SINE Alu 1 309 -3 3774 105 22 8 chr10 67385674 67386228 -78203060 + Tigger1 DNA MER2_type 1478 2042 -376 2379 99 3 0 chr10 67386228 67386531 -78202757 + AluSp SINE Alu 1 304 -9 2371 76 0 3 chr10 67386533 67386835 -78202453 + AluY SINE Alu 1 301 -10 395 227 91 13 chr10 67386857 67387011 -78202277 + MER90 LTR ERV1 396 561 -53 1478 164 18 82 chr10 67387203 67387382 -78201906 - AluJo SINE Alu -4 308 158 2218 113 0 3 chr10 67387382 67387684 -78201604 - AluSg SINE Alu -9 301 1 1478 164 18 82 chr10 67387684 67387833 -78201455 - AluJo SINE Alu -154 158 1 2006 149 0 0 chr10 67387843 67388139 -78201149 - AluSx SINE Alu -7 305 10 1087 90 0 0 chr10 67388150 67388283 -78201005 - AluSq/x SINE Alu -180 133 1 296 75 0 0 chr10 67388283 67388323 -78200965 + MSTA LTR MaLR 389 428 0 569 244 6 54 chr10 67388323 67388491 -78200797 - L1ME3 LINE L1 -55 6107 5948 904 166 106 4 chr10 67388628 67388863 -78200425 + Charlie5 DNA MER1_type 2316 2574 -38 2218 118 3 0 chr10 67388863 67389159 -78200129 - AluSx SINE Alu -15 297 1 935 154 0 0 chr10 67389661 67389791 -78199497 - FLAM_C SINE Alu -13 130 1 1193 189 4 18 chr10 67389813 67390041 -78199247 - AluJb SINE Alu -2 310 86 521 31 0 0 chr10 67390061 67390125 -78199163 - AluSp/q SINE Alu -18 295 232 1524 107 0 0 chr10 67390125 67390322 -78198966 - AluSg1 SINE Alu -112 197 1 738 221 0 0 chr10 67390327 67390454 -78198834 - FLAM_A SINE Alu -6 127 1 1274 176 44 88 chr10 67390465 67390783 -78198505 - AluJo SINE Alu -8 304 1 2444 84 0 7 chr10 67390785 67391084 -78198204 - AluY SINE Alu -14 297 1 361 135 40 0 chr10 67391102 67391176 -78198112 + GA-rich Low_complexity Low_complexity 3 79 0 1897 157 24 0 chr10 67391207 67391501 -78197787 + AluSx SINE Alu 11 311 -1 302 141 39 13 chr10 67391507 67391585 -78197703 + GA-rich Low_complexity Low_complexity 1 80 0 392 116 29 0 chr10 67391587 67391656 -78197632 - MER11A LTR ERVK 0 1266 1196 20992 118 13 14 chr10 67391812 67395211 -78194077 - L1P LINE L1 -2739 3407 12 339 258 62 0 chr10 67395343 67395440 -78193848 + Looper DNA T2_type 419 521 -1037 1874 127 3 31 chr10 67395475 67395766 -78193522 - AluSx SINE Alu -26 286 4 998 94 18 12 chr10 67395767 67395938 -78193350 + (TTTC)n Simple_repeat Simple_repeat 2 173 0 2177 103 0 0 chr10 67395938 67396219 -78193069 - AluSg SINE Alu -29 281 1 2367 109 0 0 chr10 67396221 67396525 -78192763 - AluSx SINE Alu -4 308 5 946 158 81 14 chr10 67396545 67396766 -78192522 + Looper DNA T2_type 513 748 -810 1564 124 3 170 chr10 67396803 67397167 -78192121 + AluJb SINE Alu 1 303 -9 185 265 10 112 chr10 67397941 67398039 -78191249 + L3 LINE CR1 1292 1379 -198 2256 102 30 0 chr10 67399041 67399345 -78189943 - AluSp SINE Alu 0 313 1 2064 153 0 0 chr10 67399346 67399641 -78189647 - AluSx SINE Alu -17 295 1 1912 141 3 52 chr10 67399653 67399979 -78189309 - AluSg SINE Alu 0 310 1 942 136 70 47 chr10 67399979 67400156 -78189132 + Tigger1 DNA MER2_type 1248 1432 -986 1978 128 10 24 chr10 67400156 67400453 -78188835 - AluSq SINE Alu -20 293 1 942 136 70 47 chr10 67400453 67400488 -78188800 + Tigger1 DNA MER2_type 1432 1465 -953 372 171 0 0 chr10 67400481 67400557 -78188731 - AluS SINE Alu 0 300 225 * 1600 112 14 5 chr10 67400660 67400883 -78188405 + AluSg/x SINE Alu 69 293 -19 529 210 161 0 chr10 67401925 67402068 -78187220 - MER3 DNA MER1_type -11 198 33 2396 71 3 7 chr10 67402512 67402807 -78186481 + AluSp SINE Alu 3 296 -17 343 324 108 22 chr10 67402828 67403013 -78186275 + L1 LINE L1 2271 2471 -3675 289 335 103 0 chr10 67403177 67403332 -78185956 - MIR SINE MIR 0 262 92 2229 123 0 0 chr10 67403404 67403706 -78185582 - AluY SINE Alu -9 302 1 2121 121 0 7 chr10 67403714 67404019 -78185269 - AluSq SINE Alu -10 303 1 1908 105 16 70 chr10 67404070 67404383 -78184905 + AluSx SINE Alu 1 296 -16 362 288 107 91 chr10 67404450 67404925 -78184363 + L1 LINE L1 2894 3376 -2770 229 267 248 10 chr10 67404938 67405039 -78184249 + L2 LINE L2 3187 3311 -2 1460 181 80 21 chr10 67405102 67405390 -78183898 + AluJb SINE Alu 1 305 -7 489 167 0 31 chr10 67405481 67405577 -78183711 + FLAM_C SINE Alu 46 138 -5 270 305 23 40 chr10 67405885 67406059 -78183229 + G-rich Low_complexity Low_complexity 2 172 0 1041 152 98 0 chr10 67406252 67406436 -78182852 - AluJo SINE Alu -110 202 1 2278 99 0 13 chr10 67406733 67407035 -78182253 + AluSq SINE Alu 1 298 -15 2338 100 0 0 chr10 67407140 67407431 -78181857 + AluSx SINE Alu 14 304 -8 860 113 0 57 chr10 67407527 67407668 -78181620 + FLAM_C SINE Alu 1 133 0 2411 61 0 3 chr10 67408235 67408529 -78180759 - AluY SINE Alu -18 293 1 2410 83 7 0 chr10 67408563 67408865 -78180423 - AluSq SINE Alu -9 304 1 297 254 249 29 chr10 67409102 67409307 -78179981 - MIR SINE MIR 0 262 13 2571 55 7 0 chr10 67409558 67409866 -78179422 + AluY SINE Alu 1 310 -1 1282 133 188 28 chr10 67410212 67410327 -78178961 - AluSc SINE Alu -3 296 201 2007 121 3 36 chr10 67410327 67410666 -78178622 - AluSq SINE Alu 0 313 1 1282 133 188 28 chr10 67410666 67410805 -78178483 - AluSc SINE Alu -98 201 1 2676 49 0 0 chr10 67411113 67411420 -78177868 + AluY SINE Alu 1 307 -4 1855 64 0 8 chr10 67411420 67411653 -78177635 + AluSq SINE Alu 73 304 -9 761 111 7 96 chr10 67413219 67413240 -78176048 - AluJb SINE Alu -181 131 110 207 0 0 0 chr10 67413240 67413263 -78176025 + (TTTA)n Simple_repeat Simple_repeat 4 26 0 761 111 7 96 chr10 67413263 67413376 -78175912 - AluJb SINE Alu -202 110 9 2171 119 0 0 chr10 67413594 67413880 -78175408 - AluSx SINE Alu -26 286 1 439 133 27 0 chr10 67413885 67413960 -78175328 + L1M3 LINE L1 5508 5584 -599 2265 109 0 7 chr10 67414069 67414234 -78175054 - AluSg SINE Alu -10 300 136 2417 65 0 36 chr10 67414234 67414543 -78174745 - AluY SINE Alu -13 298 1 2265 109 0 7 chr10 67414543 67414679 -78174609 - AluSg SINE Alu -174 136 1 2130 92 19 25 chr10 67414682 67414997 -78174291 - AluSq SINE Alu 0 313 1 2124 121 24 0 chr10 67415005 67415295 -78173993 - AluSq SINE Alu -16 297 1 1714 207 26 5 chr10 67415298 67415675 -78173613 + MLT1A2-int LTR MaLR 1351 1735 0 1141 216 21 90 chr10 67415687 67416076 -78173212 + MLT1A2 LTR MaLR 13 374 0 533 305 102 54 chr10 67416190 67416632 -78172656 - L1MEc LINE L1 -5844 552 90 782 142 0 75 chr10 67416824 67416958 -78172330 - FLAM_C SINE Alu -18 125 2 1835 130 173 14 chr10 67417000 67417369 -78171919 - MSTA LTR MaLR 0 428 1 22 35 0 0 chr10 67417436 67417465 -78171823 + AT_rich Low_complexity Low_complexity 1 29 0 1358 122 45 32 chr10 67418517 67418764 -78170524 - AluJb SINE Alu -23 289 40 251 175 0 32 chr10 67419930 67419993 -78169295 + G-rich Low_complexity Low_complexity 1 61 0 1048 140 6 0 chr10 67420128 67420292 -78168996 + AluJb SINE Alu 137 301 -11 2273 65 20 3 chr10 67420305 67420599 -78168689 + AluSc SINE Alu 1 299 -10 805 151 8 0 chr10 67420946 67421072 -78168216 - AluJb SINE Alu -17 295 169 975 218 114 20 chr10 67521198 67521496 -78067792 - LTR48B LTR ERV1 -318 326 1 1234 125 22 0 chr10 67521522 67521706 -78067582 + AluSp SINE Alu 123 310 -3 500 117 0 0 chr10 67522380 67522457 -78066831 - L1M4 LINE L1 -501 5683 5607 202 297 81 0 chr10 67523158 67523232 -78066056 - MIR SINE MIR -117 145 66 3233 89 19 19 chr10 67523883 67524410 -78064878 + L1P5 LINE L1 5265 5791 -360 273 196 0 0 chr10 67524426 67524482 -78064806 + (TATG)n Simple_repeat Simple_repeat 2 57 0 337 75 0 0 chr10 67524483 67524536 -78064752 + L1PB1 LINE L1 6098 6150 -1 251 267 69 9 chr10 67526767 67526883 -78062405 + Charlie7 DNA MER1_type 44 166 -2446 344 216 108 18 chr10 67528891 67529002 -78060286 + MIR SINE MIR 33 153 -109 1018 123 0 0 chr10 67530236 67530391 -78058897 - L1PA13 LINE L1 -15 6148 5994 252 220 0 0 chr10 67531138 67531197 -78058091 + FAM SINE Alu 115 173 -6 21 71 0 0 chr10 67531396 67531438 -78057850 + AT_rich Low_complexity Low_complexity 1 42 0 1942 155 7 0 chr10 67531438 67531728 -78057560 - AluJb SINE Alu -20 292 1 332 312 48 42 chr10 67534175 67534364 -78054924 - L1MEc LINE L1 -6100 296 107 516 247 55 7 chr10 67534394 67534540 -78054748 + L1M4b LINE L1 2 154 -6705 3862 119 29 5 chr10 67534544 67535168 -78054120 - L1MA2 LINE L1 0 6304 5666 447 159 15 28 chr10 67535322 67535446 -78053842 + MSTA LTR MaLR 305 428 0 * 552 217 0 35 chr10 67535446 67535557 -78053731 - Tigger3(Golem) DNA MER2_type -2922 107 1 214 229 57 57 chr10 67535557 67535627 -78053661 - L2 LINE L2 -36 3277 3208 203 337 86 69 chr10 67535844 67536019 -78053269 + MIR3 SINE MIR 30 207 -1 293 231 56 74 chr10 67536216 67536324 -78052964 + L2 LINE L2 3205 3310 -3 1457 188 38 17 chr10 67536504 67536850 -78052438 - L1MB1 LINE L1 -16 6152 5800 2264 110 3 0 chr10 67537022 67537323 -78051965 + AluSp SINE Alu 5 306 -7 4317 221 8 9 chr10 67537336 67538205 -78051083 + L1PA14 LINE L1 233 1100 -5687 261 211 19 19 chr10 67538521 67538625 -78050663 + GA-rich Low_complexity Low_complexity 3 106 0 5234 164 31 7 chr10 67538787 67540253 -78049035 + L1PA14 LINE L1 5181 6684 -128 4043 219 4 24 chr10 67540367 67541391 -78047897 - L1 LINE L1 -2029 4117 3115 3302 212 50 31 chr10 67542017 67542983 -78046305 - L1MB1 LINE L1 -663 5517 4571 1525 179 4 15 chr10 67542983 67543251 -78046037 + AluJo SINE Alu 23 287 -25 234 0 0 0 chr10 67543253 67543279 -78046009 + (CA)n Simple_repeat Simple_repeat 2 27 0 3302 212 50 31 chr10 67543279 67543470 -78045818 - L1MB1 LINE L1 -1609 4571 4330 1080 136 0 0 chr10 67543477 67543631 -78045657 + FRAM SINE Alu 14 167 -9 1239 211 18 11 chr10 67543668 67543952 -78045336 + L1 LINE L1 4023 4308 -1838 430 257 144 24 chr10 67543961 67544253 -78045035 - L1ME4a LINE L1 -188 5933 5607 304 257 198 0 chr10 67544459 67544560 -78044728 - L1ME4a LINE L1 -623 5498 5378 266 296 92 88 chr10 67544702 67545202 -78044086 + L1MEd LINE L1 512 1013 -5106 2102 145 0 0 chr10 67545205 67545509 -78043779 + AluSx SINE Alu 1 304 -8 869 214 60 25 chr10 67545579 67545780 -78043508 - MER8 DNA MER2_type 0 239 32 216 258 55 62 chr10 67545820 67545948 -78043340 - L2 LINE L2 -69 3244 3118 195 269 19 0 chr10 67546042 67546094 -78043194 - L2 LINE L2 -341 2972 2920 2057 104 42 0 chr10 67546368 67546655 -78042633 - AluSx SINE Alu -13 299 1 2262 110 0 0 chr10 67546688 67546988 -78042300 - AluSc SINE Alu -9 300 1 30 0 0 0 chr10 67547532 67547562 -78041726 + AT_rich Low_complexity Low_complexity 1 30 0 1560 206 0 25 chr10 67547582 67547898 -78041390 + AluJb SINE Alu 1 308 -4 1074 195 37 86 chr10 67548009 67548358 -78040930 - L1MD2 LINE L1 -1 6358 6027 323 258 67 0 chr10 67549729 67549818 -78039470 + MIR SINE MIR 86 180 -82 1437 128 31 0 chr10 67549890 67550116 -78039172 - AluSc SINE Alu -19 290 58 448 167 200 0 chr10 67550941 67551031 -78038257 + FLAM_A SINE Alu 9 116 -26 610 191 0 44 chr10 67552546 67552682 -78036606 + FLAM_A SINE Alu 4 133 0 736 197 15 0 chr10 67552756 67552888 -78036400 + FRAM SINE Alu 26 159 -17 1114 141 0 0 chr10 67553302 67553465 -78035823 - AluSg/x SINE Alu -13 299 137 24 67 0 0 chr10 67553571 67553616 -78035672 + AT_rich Low_complexity Low_complexity 1 45 0 2111 128 0 0 chr10 67553657 67553946 -78035342 + AluSq SINE Alu 1 289 -24 512 109 22 22 chr10 67554174 67554266 -78035022 + Alu SINE Alu 221 312 0 2019 136 0 7 chr10 67554470 67554772 -78034516 + AluSx SINE Alu 1 300 -12 1831 171 0 3 chr10 67554981 67555300 -78033988 - AluJb SINE Alu 0 318 1 344 277 62 9 chr10 67555343 67555455 -78033833 - HAL1 LINE L1 -1643 864 747 2096 129 3 0 chr10 67555769 67556072 -78033216 - AluSx SINE Alu -3 309 6 1420 151 38 75 chr10 67556211 67556373 -78032915 - AluJb SINE Alu -17 295 147 2127 117 0 29 chr10 67556373 67556682 -78032606 - AluSx SINE Alu -10 302 3 1420 151 38 75 chr10 67556682 67556811 -78032477 - AluJb SINE Alu -165 147 15 1682 147 53 4 chr10 67557020 67557286 -78032002 - AluJb SINE Alu -13 299 21 183 281 83 31 chr10 67557464 67557560 -78031728 + L2 LINE L2 2743 2843 -471 579 122 0 0 chr10 67558008 67558090 -78031198 + AluSg1 SINE Alu 1 82 -227 206 386 9 44 chr10 67558169 67558283 -78031005 + MIR3 SINE MIR 54 163 -45 459 243 52 29 chr10 67558361 67558497 -78030791 + MER77 LTR ERV1 59 197 -408 1354 237 70 27 chr10 67558667 67559060 -78030228 + MER77 LTR ERV1 214 673 -4 646 232 46 20 chr10 67559093 67559244 -78030044 + MER21-int LTR ERV1 3073 3227 -3531 * 716 233 34 47 chr10 67559240 67559522 -78029766 + MER21-int LTR ERV1 138 3356 -3402 988 228 90 82 chr10 67559551 67559756 -78029532 + MER21-int LTR ERV1 1219 1430 -2761 2125 127 13 0 chr10 67559756 67560064 -78029224 - AluSp SINE Alu 0 313 2 988 228 90 82 chr10 67560064 67560213 -78029075 + MER21-int LTR ERV1 1430 1576 -2615 927 251 92 55 chr10 67560385 67560740 -78028548 + MER21-int LTR ERV1 1681 4959 -1799 505 237 96 19 chr10 67560738 67560894 -78028394 + MER21-int LTR ERV1 2087 2254 -1937 * 1568 131 150 0 chr10 67561207 67561467 -78027821 - AluSx SINE Alu -3 299 1 277 176 27 14 chr10 67561610 67561684 -78027604 + CT-rich Low_complexity Low_complexity 4 78 0 1846 126 22 4 chr10 67561693 67561962 -78027326 - AluSx SINE Alu -38 274 1 765 289 101 86 chr10 67562257 67562804 -78026484 + MER77 LTR ERV1 44 598 -7 352 304 190 16 chr10 67562886 67563070 -78026218 - MIR SINE MIR -40 222 7 1751 164 0 14 chr10 67563513 67563799 -78025489 - AluJo SINE Alu -28 284 3 250 192 150 42 chr10 67563893 67564013 -78025275 - L1ME LINE L1 -298 5823 5691 240 279 126 0 chr10 67564143 67564254 -78025034 - L1ME LINE L1 -477 5644 5520 22 0 0 0 chr10 67564686 67564708 -78024580 + AT_rich Low_complexity Low_complexity 1 22 0 429 289 60 54 chr10 67565161 67565327 -78023961 - L2 LINE L2 0 3272 3106 354 195 99 146 chr10 67566572 67566936 -78022352 + L1MC5 LINE L1 7307 7653 -308 310 179 0 0 chr10 67566954 67567010 -78022278 + L1MC5 LINE L1 7815 7870 -91 1615 191 7 13 chr10 67567198 67567502 -78021786 + AluJo SINE Alu 1 302 -10 2137 110 3 0 chr10 67567521 67567825 -78021463 + AluSp SINE Alu 1 305 0 414 164 0 14 chr10 67568031 67568104 -78021184 + AluJ/FRAM SINE Alu 228 299 -3 21 36 0 0 chr10 67568206 67568234 -78021054 + AT_rich Low_complexity Low_complexity 1 28 0 1978 230 85 32 chr10 67568953 67569545 -78019743 - L1ME1 LINE L1 -20 6146 5587 2303 96 0 0 chr10 67569545 67569837 -78019451 - AluY SINE Alu -19 292 1 1978 230 85 32 chr10 67569837 67570175 -78019113 - L1ME1 LINE L1 -579 5587 5268 2250 105 3 0 chr10 67570175 67570471 -78018817 - AluSp SINE Alu -16 297 1 1978 230 85 32 chr10 67570471 67570830 -78018458 - L1ME1 LINE L1 -898 5268 4756 1863 145 0 20 chr10 67570830 67571134 -78018154 - AluSx SINE Alu -13 299 2 1978 230 85 32 chr10 67571134 67571258 -78018030 - L1ME1 LINE L1 -1410 4756 4640 10063 191 44 72 chr10 67571339 67571744 -78017544 - L1M1 LINE L1 -498 6507 6092 1819 175 0 3 chr10 67571744 67572047 -78017241 - AluJb SINE Alu -8 304 3 10063 191 44 72 chr10 67572047 67572124 -78017164 - L1M1 LINE L1 -913 6092 6014 378 0 0 0 chr10 67572124 67572166 -78017122 + (TG)n Simple_repeat Simple_repeat 2 43 0 10063 191 44 72 chr10 67572166 67572187 -78017101 - L1M1 LINE L1 -991 6014 5994 2363 99 0 0 chr10 67572187 67572489 -78016799 - AluSc SINE Alu -7 302 1 10063 191 44 72 chr10 67572489 67572961 -78016327 - L1M1 LINE L1 -1011 5994 5510 239 167 56 0 chr10 67572961 67573015 -78016273 + LTR8A LTR ERV1 1 57 -670 10063 191 44 72 chr10 67573015 67573488 -78015800 - L1M1 LINE L1 -1495 5510 5025 2340 74 0 0 chr10 67573488 67573805 -78015483 - AluY SINE Alu 0 311 1 10063 191 44 72 chr10 67573805 67575691 -78013597 - L1M1 LINE L1 -1980 5025 3201 2127 114 40 0 chr10 67575691 67575989 -78013299 - AluSx SINE Alu 0 312 3 10063 191 44 72 chr10 67575989 67576297 -78012991 - L1M1 LINE L1 -3804 3201 2886 10133 199 36 26 chr10 67576301 67577098 -78012190 - L1M1 LINE L1 -3982 2867 2080 2500 69 0 0 chr10 67577098 67577403 -78011885 + AluY SINE Alu 1 305 -6 10133 199 36 26 chr10 67577403 67578877 -78010411 - L1M1 LINE L1 -4769 2080 572 249 83 0 0 chr10 67578921 67578957 -78010331 + (TG)n Simple_repeat Simple_repeat 2 37 0 385 276 90 0 chr10 67578999 67579144 -78010144 - L1ME1 LINE L1 -1594 4552 4395 225 215 0 46 chr10 67579220 67579285 -78010003 + Tigger1 DNA MER2_type 14 75 -2343 1650 167 0 39 chr10 67579306 67579611 -78009677 + AluJo SINE Alu 20 312 0 3109 160 31 31 chr10 67579638 67580243 -78009045 + Tigger1 DNA MER2_type 71 675 -1743 5833 153 112 3 chr10 67580250 67581314 -78007974 + Tigger1 DNA MER2_type 1072 2251 -167 1688 177 0 3 chr10 67581314 67581596 -78007692 - AluJb SINE Alu -11 301 21 1051 199 54 4 chr10 67582387 67582648 -78006640 - L1 LINE L1 -2055 4091 3818 495 335 0 13 chr10 67582648 67582803 -78006485 + MER58A DNA MER1_type 40 192 -32 2049 118 4 0 chr10 67582823 67583103 -78006185 - AluSq SINE Alu -32 281 1 3048 140 18 24 chr10 67583383 67583482 -78005806 - L1MA4 LINE L1 -256 6044 5946 1674 145 0 89 chr10 67583482 67583807 -78005481 - AluJo SINE Alu -14 298 3 3048 140 18 24 chr10 67583807 67584250 -78005038 - L1MA4 LINE L1 -354 5946 5505 1637 101 24 0 chr10 67584250 67584497 -78004791 + L1MA4 LINE L1 6043 6296 -4 1467 217 3 19 chr10 67584789 67585103 -78004185 + AluJo SINE Alu 1 309 -3 2276 85 0 7 chr10 67586428 67586723 -78002565 - AluSg SINE Alu -17 293 1 32 43 0 0 chr10 67587027 67587073 -78002215 + AT_rich Low_complexity Low_complexity 1 46 0 955 171 0 59 chr10 67587099 67587286 -78002002 - AluJo/FRAM SINE Alu -3 309 134 2242 99 0 7 chr10 67587287 67587580 -78001708 - AluSg SINE Alu -19 291 1 2960 189 54 2 chr10 67587604 67588229 -78001059 - L1MB3 LINE L1 -2 6181 5524 1965 77 41 0 chr10 67589065 67589311 -77999977 - AluSg SINE Alu -20 290 35 1363 182 84 25 chr10 67589367 67589642 -77999646 - AluJo SINE Alu -20 292 2 1720 175 3 3 chr10 67589937 67590234 -77999054 - AluJo SINE Alu -13 299 3 23 0 0 0 chr10 67590464 67590487 -77998801 + AT_rich Low_complexity Low_complexity 1 23 0 1162 159 0 0 chr10 67591065 67591241 -77998047 + AluJb SINE Alu 137 312 0 1074 177 24 76 chr10 67591369 67591618 -77997670 + AluJo SINE Alu 1 236 -76 3813 168 68 28 chr10 67591677 67592471 -77996817 + L1MB4 LINE L1 5233 6069 -111 2177 124 0 3 chr10 67592471 67592778 -77996510 + AluSq SINE Alu 1 306 -7 3813 168 68 28 chr10 67592778 67592889 -77996399 + L1MB4 LINE L1 6069 6174 -6 1926 121 40 0 chr10 67593334 67593606 -77995682 - AluSx SINE Alu -29 283 1 1443 189 28 91 chr10 67593742 67594138 -77995150 - MLT1B LTR MaLR 0 390 20 406 241 38 8 chr10 67594166 67594296 -77994992 - L1ME3A LINE L1 -36 6134 6000 2260 86 3 0 chr10 67594393 67594683 -77994605 - AluSp SINE Alu -22 291 1 497 249 48 90 chr10 67594835 67595000 -77994288 - L1M4 LINE L1 -2943 3203 3033 1499 149 31 87 chr10 67595000 67595321 -77993967 - AluJo SINE Alu -9 303 1 497 249 48 90 chr10 67595321 67595516 -77993772 - L1M4 LINE L1 -3113 3033 2849 2277 89 3 0 chr10 67595588 67595880 -77993408 - AluSg SINE Alu -17 293 1 192 40 0 0 chr10 67595880 67595905 -77993383 + (T)n Simple_repeat Simple_repeat 1 25 0 2157 117 0 3 chr10 67596340 67596630 -77992658 - AluSx SINE Alu -21 291 3 2244 105 3 0 chr10 67596642 67596938 -77992350 - AluSg SINE Alu -13 297 1 708 249 27 16 chr10 67597442 67597627 -77991661 + MER5A DNA MER1_type 3 189 0 23 0 0 0 chr10 67599246 67599269 -77990019 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr10 67599361 67599391 -77989897 + AT_rich Low_complexity Low_complexity 1 30 0 1820 144 27 17 chr10 67600815 67600981 -77988307 - AluSx SINE Alu -15 297 125 186 43 0 0 chr10 67600981 67601004 -77988284 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1820 144 27 17 chr10 67601004 67601129 -77988159 - AluSx SINE Alu -187 125 3 23 0 0 0 chr10 67601134 67601157 -77988131 + AT_rich Low_complexity Low_complexity 1 23 0 2342 87 3 0 chr10 67601452 67601751 -77987537 + AluY SINE Alu 1 300 -11 3105 167 35 7 chr10 67602784 67603376 -77985912 + Tigger2 DNA MER2_type 1 609 -2109 1193 162 103 0 chr10 67603406 67603640 -77985648 + Tigger2 DNA MER2_type 2461 2718 0 706 143 0 95 chr10 67603676 67603823 -77985465 + FLAM_C SINE Alu 1 133 0 2167 113 0 10 chr10 67603834 67604135 -77985153 + AluSc SINE Alu 1 298 -11 2390 85 3 0 chr10 67604138 67604443 -77984845 + AluSq SINE Alu 1 306 -7 423 205 159 3 chr10 67604451 67604649 -77984639 - L1ME3 LINE L1 -71 6091 5852 425 238 20 10 chr10 67604650 67604751 -77984537 - MLT1C LTR MaLR 0 467 366 26 0 0 0 chr10 67605014 67605040 -77984248 + AT_rich Low_complexity Low_complexity 1 26 0 198 280 80 0 chr10 67605144 67605194 -77984094 + MIR SINE MIR 34 87 -121 199 204 61 0 chr10 67605706 67605755 -77983533 - L2 LINE L2 -1 3312 3261 3567 158 41 16 chr10 67605781 67606463 -77982825 + LTR34 LTR ERV1 1 699 0 2441 265 101 56 chr10 67606740 67607313 -77981975 - HAL1 LINE L1 -495 2012 1466 2189 100 7 3 chr10 67607313 67607613 -77981675 - AluY SINE Alu -8 303 3 2441 265 101 56 chr10 67607613 67608779 -77980509 - HAL1 LINE L1 -1041 1466 148 223 359 144 25 chr10 67608780 67609100 -77980188 - L3 LINE CR1 -783 794 437 2131 134 0 7 chr10 67610114 67610420 -77978868 + AluSx SINE Alu 1 304 -8 464 245 83 22 chr10 67610437 67610576 -77978712 + MIR SINE MIR 42 187 -67 581 237 0 37 chr10 67611192 67611327 -77977961 + FLAM_A SINE Alu 2 131 -2 1169 131 0 0 chr10 67611611 67611771 -77977517 - AluSg/x SINE Alu -19 293 134 2173 110 7 7 chr10 67611771 67612080 -77977208 - AluSg SINE Alu -1 309 1 207 286 160 25 chr10 67612139 67612258 -77977030 - MIR SINE MIR -22 240 106 362 373 83 0 chr10 67612719 67612936 -77976352 - L2 LINE L2 -380 2934 2700 342 128 86 94 chr10 67613458 67613575 -77975713 - L1M2 LINE L1 -862 5438 5323 2350 88 7 0 chr10 67613576 67613884 -77975404 - AluSp SINE Alu -3 310 1 768 200 0 19 chr10 67613884 67614039 -77975249 - MLT1A1 LTR MaLR -211 154 3 775 189 16 22 chr10 67614041 67614226 -77975062 + L1MC4a LINE L1 2644 2827 -3319 453 176 11 11 chr10 67614232 67614323 -77974965 + FLAM SINE Alu 43 133 -10 455 256 72 66 chr10 67614344 67614578 -77974710 + L1MC4a LINE L1 2848 3079 -3067 1899 112 77 0 chr10 67614578 67614864 -77974424 + AluSq SINE Alu 1 308 -5 1866 134 3 41 chr10 67614865 67615156 -77974132 + AluSg SINE Alu 1 280 -30 455 256 72 66 chr10 67615156 67615266 -77974022 + L1MC4a LINE L1 3078 3196 -2950 1077 226 111 36 chr10 67615327 67615742 -77973546 + L1MC4a LINE L1 5482 5927 -1881 21 0 0 0 chr10 67615787 67615808 -77973480 + AT_rich Low_complexity Low_complexity 1 21 0 235 192 40 121 chr10 67615838 67615937 -77973351 + L1MC4a LINE L1 6074 6164 -1644 2091 202 73 112 chr10 67616281 67616790 -77972498 + L1MC5 LINE L1 6637 7085 -876 2119 120 0 10 chr10 67616790 67617091 -77972197 + AluSx SINE Alu 1 298 -14 2091 202 73 112 chr10 67617091 67617639 -77971649 + L1MC5 LINE L1 7085 7653 -308 310 179 0 0 chr10 67617657 67617713 -77971575 + L1MC5 LINE L1 7815 7870 -91 1728 189 3 10 chr10 67617901 67618213 -77971075 + AluJo SINE Alu 1 310 -2 1646 182 14 10 chr10 67618428 67618724 -77970564 - AluJo SINE Alu -15 297 1 311 369 18 0 chr10 67619069 67619180 -77970108 - MIR3 SINE MIR -92 116 4 307 115 49 0 chr10 67619791 67619852 -77969436 - Charlie1 DNA MER1_type -76 2685 2622 382 242 42 0 chr10 67619932 67620027 -77969261 - Charlie1 DNA MER1_type -2620 141 43 305 286 29 23 chr10 67620205 67620360 -77968928 + HsTC2 DNA Tc2 483 637 -1261 190 354 62 26 chr10 67621580 67621693 -77967595 - MER5A DNA MER1_type -9 180 64 624 216 47 6 chr10 67621972 67622143 -77967145 + L1MC5 LINE L1 7260 7437 -524 2070 134 0 23 chr10 67622203 67622509 -77966779 + AluSx SINE Alu 1 299 -13 1135 120 12 0 chr10 67622509 67622676 -77966612 + AluSg/x SINE Alu 134 302 -10 351 303 0 0 chr10 67622702 67622791 -77966497 - MER3 DNA MER1_type -103 106 18 2133 96 55 0 chr10 67622911 67623203 -77966085 + AluSx SINE Alu 1 308 -4 629 149 17 103 chr10 67623593 67623640 -77965648 - L1MB4 LINE L1 -1 6179 6130 2033 121 0 0 chr10 67623640 67623930 -77965358 - AluSx SINE Alu -11 301 12 629 149 17 103 chr10 67623930 67624057 -77965231 - L1MB4 LINE L1 -50 6130 6020 4635 209 79 20 chr10 67624058 67624675 -77964613 - L1MB4 LINE L1 -222 5958 5378 195 42 0 0 chr10 67624675 67624699 -77964589 + (TTTTG)n Simple_repeat Simple_repeat 4 27 0 4635 209 79 20 chr10 67624699 67625181 -77964107 - L1MB4 LINE L1 -802 5378 4926 843 200 134 66 chr10 67625181 67625501 -77963787 + MER2 DNA MER2_type 1 342 -2 4635 209 79 20 chr10 67625501 67626450 -77962838 - L1MB4 LINE L1 -1254 4926 3788 322 210 0 25 chr10 67626456 67626544 -77962744 - FAM SINE Alu 0 179 104 247 139 23 0 chr10 67626563 67626606 -77962682 - L1M3 LINE L1 -460 5723 5680 367 256 0 0 chr10 67626615 67626693 -77962595 - FRAM/FAM SINE Alu -89 77 1 1768 188 10 0 chr10 67626791 67627099 -77962189 - AluJb SINE Alu -1 311 1 267 290 60 40 chr10 67627103 67627303 -77961985 - L1M4 LINE L1 -1544 4602 4399 2173 99 3 0 chr10 67627785 67628097 -77961191 - AluSx SINE Alu 0 313 1 2012 138 0 0 chr10 67628476 67628788 -77960500 + AluSx SINE Alu 1 312 0 1363 151 5 0 chr10 67628964 67629176 -77960112 - AluSg/x SINE Alu 0 312 100 3106 268 81 66 chr10 67630056 67630757 -77958531 + L2 LINE L2 1794 2483 -830 2006 134 6 10 chr10 67630757 67631070 -77958218 + AluJb SINE Alu 1 312 0 3106 268 81 66 chr10 67631070 67631714 -77957574 + L2 LINE L2 2483 3148 -165 1596 161 51 25 chr10 67631714 67631988 -77957300 - AluJo SINE Alu -31 281 1 3106 268 81 66 chr10 67631988 67632132 -77957156 + L2 LINE L2 3148 3288 -25 1316 109 0 0 chr10 67632135 67632309 -77956979 + AluSq SINE Alu 129 302 -11 2196 100 0 0 chr10 67632361 67632667 -77956621 + AluSx SINE Alu 3 308 0 1842 243 85 61 chr10 67632994 67633321 -77955967 + MER21B LTR ERV1 5 323 -608 1785 162 3 10 chr10 67633321 67633635 -77955653 + AluJo SINE Alu 1 312 0 1842 243 85 61 chr10 67633635 67634068 -77955220 + MER21B LTR ERV1 323 848 -83 201 234 21 0 chr10 67634924 67634971 -77954317 + L2 LINE L2 3258 3305 -8 727 320 28 24 chr10 67635407 67635654 -77953634 - MIR SINE MIR -12 250 3 185 281 237 7 chr10 67635797 67635932 -77953356 + L2 LINE L2 2892 3057 -215 305 277 98 9 chr10 67636005 67636117 -77953171 + MIR SINE MIR 102 223 -39 216 0 0 0 chr10 67636543 67636567 -77952721 + (TC)n Simple_repeat Simple_repeat 2 25 0 1984 123 0 0 chr10 67636578 67636846 -77952442 - AluSq SINE Alu -11 302 35 4002 258 143 63 chr10 67637868 67640514 -77948774 - L2 LINE L2 0 3313 453 1914 161 3 0 chr10 67641015 67641314 -77947974 - AluSx SINE Alu -11 301 2 883 278 70 65 chr10 67641990 67642202 -77947086 - L1MEc LINE L1 -5754 642 433 704 141 7 22 chr10 67642202 67642337 -77946951 - FLAM_C SINE Alu 0 133 1 883 278 70 65 chr10 67642337 67642742 -77946546 - L1MEc LINE L1 -5963 433 22 21 0 0 0 chr10 67642751 67642772 -77946516 + AT_rich Low_complexity Low_complexity 1 21 0 1818 189 16 0 chr10 67643052 67643359 -77945929 + AluJo SINE Alu 1 312 0 2298 74 3 17 chr10 67643537 67643836 -77945452 + AluSp SINE Alu 1 295 -18 21 0 0 0 chr10 67643838 67643859 -77945429 + AT_rich Low_complexity Low_complexity 1 21 0 256 169 141 28 chr10 67644248 67644319 -77944969 - MLT1J LTR MaLR -48 463 385 316 238 0 0 chr10 67644700 67644780 -77944508 - LTR58 LTR ERV1 -250 429 350 2222 100 0 0 chr10 67644901 67645201 -77944087 - AluSc SINE Alu -9 300 1 1054 194 133 15 chr10 67645911 67646174 -77943114 + AluJo SINE Alu 2 295 -7 1364 164 71 25 chr10 67646178 67646502 -77942786 - L1MB7 LINE L1 -11 6173 5835 1475 166 123 3 chr10 67646509 67646859 -77942429 - L1MB7 LINE L1 -888 5258 4867 2011 126 7 0 chr10 67647654 67647932 -77941356 + AluSp SINE Alu 1 280 -33 256 171 171 11 chr10 67647972 67648060 -77941228 + MLT1I LTR MaLR 304 405 -4 664 280 88 37 chr10 67650252 67650598 -77938690 + MLT1I LTR MaLR 58 392 -17 2463 131 100 6 chr10 67650727 67651208 -77938080 + L1MB8 LINE L1 5648 6173 -5 3852 131 27 21 chr10 67652251 67652953 -77936335 - L1MB1 LINE L1 0 6168 5463 1944 172 0 3 chr10 67653683 67653991 -77935297 + AluJb SINE Alu 1 307 -5 1952 107 37 0 chr10 67653995 67654267 -77935021 + AluSx SINE Alu 1 282 -30 948 105 0 0 chr10 67654267 67654419 -77934869 + (TGGA)n Simple_repeat Simple_repeat 3 154 0 28 0 0 0 chr10 67654741 67654769 -77934519 + AT_rich Low_complexity Low_complexity 1 28 0 1336 216 87 65 chr10 67654780 67655024 -77934264 - L1MC5 LINE L1 -678 7283 7046 1984 90 69 7 chr10 67655024 67655314 -77933974 - AluSq SINE Alu -5 308 1 1336 216 87 65 chr10 67655314 67655667 -77933621 - L1MC5 LINE L1 -915 7046 6673 200 221 0 0 chr10 67655972 67656023 -77933265 + MIR SINE MIR 98 140 -68 228 219 77 77 chr10 67656048 67656217 -77933071 - L1MC5 LINE L1 -407 5714 5575 22 35 0 0 chr10 67656270 67656299 -77932989 + AT_rich Low_complexity Low_complexity 1 29 0 2352 91 0 0 chr10 67656478 67656775 -77932513 - AluSp SINE Alu -16 297 1 250 139 23 0 chr10 67657142 67657185 -77932103 + AluSg/x SINE Alu 119 162 -138 25 0 0 0 chr10 67657191 67657216 -77932072 + AT_rich Low_complexity Low_complexity 1 25 0 2269 84 0 60 chr10 67657222 67657554 -77931734 + AluSq SINE Alu 1 312 -1 1835 141 0 31 chr10 67658094 67658420 -77930868 - AluSx SINE Alu 0 317 1 1166 157 60 5 chr10 67658553 67658769 -77930519 + AluJb SINE Alu 85 312 0 574 286 92 18 chr10 67659682 67659899 -77929389 + MIR SINE MIR 30 262 0 785 251 109 59 chr10 67659936 67660090 -77929198 - L2 LINE L2 0 3313 3168 2233 125 0 0 chr10 67660090 67660394 -77928894 + AluSc SINE Alu 1 304 -5 785 251 109 59 chr10 67660394 67660614 -77928674 - L2 LINE L2 -145 3168 2920 2111 142 21 6 chr10 67660640 67660972 -77928316 - MER1B DNA MER1_type 0 337 1 1212 149 6 0 chr10 67660992 67661160 -77928128 + AluSx SINE Alu 1 169 -143 2241 91 0 0 chr10 67661375 67661686 -77927602 - AluSq SINE Alu 0 311 1 1132 185 5 0 chr10 67661698 67661898 -77927390 - Tigger3(Golem) DNA MER2_type -2828 201 1 477 182 20 0 chr10 67661900 67661999 -77927289 - L1ME3A LINE L1 -51 6119 6019 521 303 60 26 chr10 67662722 67662956 -77926332 + MIR SINE MIR 15 256 -6 557 338 99 21 chr10 67663092 67663246 -77926042 + L2 LINE L2 967 1108 -2206 1123 146 9 69 chr10 67663246 67663479 -77925809 - MER20 DNA MER1_type 0 219 1 557 338 99 21 chr10 67663479 67663747 -77925541 + L2 LINE L2 1108 1422 -1892 267 318 68 11 chr10 67663787 67663875 -77925413 + MIR SINE MIR 45 137 -125 297 278 46 37 chr10 67663973 67664081 -77925207 - L2 LINE L2 -232 3081 2973 341 296 47 41 chr10 67664107 67664279 -77925009 - L2 LINE L2 -1528 1786 1614 193 308 72 82 chr10 67664368 67664563 -77924725 + L2 LINE L2 2725 2917 -397 318 67 0 0 chr10 67664621 67664666 -77924622 + (T)n Simple_repeat Simple_repeat 1 45 0 478 322 34 92 chr10 67664692 67665018 -77924270 + L2 LINE L2 2966 3272 0 184 227 68 0 chr10 67665606 67665650 -77923638 - L2 LINE L2 -16 3256 3210 206 125 153 0 chr10 67665657 67665729 -77923559 + (TTTAA)n Simple_repeat Simple_repeat 3 85 0 523 100 0 22 chr10 67666505 67666595 -77922693 + (TCTA)n Simple_repeat Simple_repeat 3 90 0 294 167 17 17 chr10 67666596 67666656 -77922632 - AluS SINE Alu -247 61 2 473 226 108 72 chr10 67666656 67666851 -77922437 + MIR SINE MIR 12 213 -49 605 208 11 71 chr10 67667261 67667444 -77921844 + MER20 DNA MER1_type 41 212 -7 623 269 87 23 chr10 67667921 67668140 -77921148 - MIR SINE MIR -9 253 21 2124 137 0 0 chr10 67668151 67668450 -77920838 - AluSx SINE Alu -13 299 1 866 175 55 25 chr10 67668561 67668761 -77920527 - MER6B DNA MER2_type -3 207 2 709 253 19 0 chr10 67670322 67670480 -77918808 + FRAM SINE Alu 1 161 -15 467 201 75 81 chr10 67671042 67671216 -77918072 + L1MC5 LINE L1 7273 7445 -516 671 259 52 37 chr10 67671225 67671630 -77917658 + L1MC5 LINE L1 7502 7912 -49 814 196 13 7 chr10 67671820 67671973 -77917315 - FRAM SINE Alu -11 165 12 1402 191 146 3 chr10 67671979 67672314 -77916974 + MER77 LTR ERV1 215 597 -8 2669 187 67 87 chr10 67672337 67673730 -77915558 - L1ME1 LINE L1 -317 6644 5284 322 254 75 20 chr10 67673717 67673918 -77915370 - L1ME1 LINE L1 -2686 4255 4044 * 499 163 0 0 chr10 67673939 67674019 -77915269 - AluJ/FLAM SINE Alu -230 82 3 25 31 0 0 chr10 67674021 67674053 -77915235 + AT_rich Low_complexity Low_complexity 1 32 0 1538 207 20 20 chr10 67674053 67674357 -77914931 - AluJb SINE Alu -8 304 1 566 276 49 120 chr10 67674357 67674582 -77914706 - L1ME1 LINE L1 -5093 1330 1151 2110 132 0 3 chr10 67674582 67674877 -77914411 - AluSx SINE Alu -18 294 1 566 276 49 120 chr10 67674877 67675101 -77914187 - L1ME1 LINE L1 -5272 1151 913 270 191 12 48 chr10 67675102 67675186 -77914102 - L1ME1 LINE L1 -5477 946 866 434 182 105 35 chr10 67675735 67675878 -77913410 - L1ME3 LINE L1 -68 6094 5942 1807 144 10 23 chr10 67676054 67676360 -77912928 + AluJb SINE Alu 1 302 -10 273 253 11 32 chr10 67676578 67676673 -77912615 - L1ME3 LINE L1 -466 5655 5563 225 0 0 0 chr10 67676674 67676699 -77912589 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 2416 106 0 0 chr10 67676731 67677043 -77912245 - AluSq SINE Alu -1 312 1 2165 119 0 3 chr10 67677257 67677550 -77911738 + AluSx SINE Alu 1 292 -20 2254 99 0 3 chr10 67677721 67678024 -77911264 + AluSc SINE Alu 1 302 -7 2128 123 10 7 chr10 67678172 67678481 -77910807 + AluSx SINE Alu 1 310 -2 29 28 0 0 chr10 67678575 67678611 -77910677 + AT_rich Low_complexity Low_complexity 1 36 0 1711 180 0 3 chr10 67678740 67679049 -77910239 - AluSx SINE Alu 0 308 1 22 35 0 0 chr10 67679870 67679899 -77909389 + AT_rich Low_complexity Low_complexity 1 29 0 229 238 32 16 chr10 67680023 67680086 -77909202 + CT-rich Low_complexity Low_complexity 1 64 0 198 0 0 0 chr10 67680514 67680536 -77908752 + (TTCA)n Simple_repeat Simple_repeat 4 25 0 358 246 140 44 chr10 67680562 67680790 -77908498 - L2 LINE L2 -41 3272 3023 249 289 237 21 chr10 67681182 67681279 -77908009 + L2 LINE L2 3136 3253 -19 435 276 291 10 chr10 67681364 67681560 -77907728 + MIR SINE MIR 7 257 -5 613 187 8 37 chr10 67681829 67681963 -77907325 - FLAM_A SINE Alu -3 139 10 21 0 0 0 chr10 67682385 67682406 -77906882 + AT_rich Low_complexity Low_complexity 1 21 0 1831 110 42 52 chr10 67683269 67683578 -77905710 - AluSq SINE Alu -7 306 1 186 43 0 0 chr10 67684642 67684665 -77904623 + (CCG)n Simple_repeat Simple_repeat 2 24 0 454 140 0 60 chr10 67686722 67686822 -77902466 + FLAM_A SINE Alu 43 136 -6 534 208 97 19 chr10 67686933 67687087 -77902201 + L1ME2 LINE L1 5985 6150 -14 1815 162 3 25 chr10 67687338 67687652 -77901636 + AluJb SINE Alu 1 307 -5 1448 217 77 35 chr10 67687924 67688381 -77900907 - MLT1D LTR MaLR -29 476 1 25 65 0 0 chr10 67688417 67688463 -77900825 + AT_rich Low_complexity Low_complexity 1 46 0 198 143 0 0 chr10 67688967 67689002 -77900286 + (TCCA)n Simple_repeat Simple_repeat 3 37 0 21 36 0 0 chr10 67690059 67690087 -77899201 + AT_rich Low_complexity Low_complexity 1 28 0 1841 155 3 14 chr10 67690280 67690571 -77898717 - AluJo SINE Alu -24 288 1 305 216 137 29 chr10 67691483 67691585 -77897703 + MER46C DNA MER2_type 2 114 -224 2000 155 7 3 chr10 67691783 67692092 -77897196 + AluJb SINE Alu 1 310 -2 1668 182 14 10 chr10 67692307 67692603 -77896685 - AluJo SINE Alu -15 297 1 309 369 18 0 chr10 67692941 67693052 -77896236 - MIR3 SINE MIR -92 116 4 292 115 49 0 chr10 67693663 67693724 -77895564 - Charlie1 DNA MER1_type -76 2685 2622 351 242 42 0 chr10 67693804 67693899 -77895389 - Charlie1 DNA MER1_type -2620 141 43 265 286 30 23 chr10 67694077 67694210 -77895078 + HsTC2 DNA Tc2 483 616 -1282 188 354 62 26 chr10 67695452 67695565 -77893723 - MER5A DNA MER1_type -9 180 64 579 216 47 6 chr10 67695844 67696015 -77893273 + L1MC5 LINE L1 7260 7437 -524 2102 134 0 23 chr10 67696075 67696381 -77892907 + AluSx SINE Alu 1 299 -13 1139 120 12 0 chr10 67696381 67696548 -77892740 + AluSg/x SINE Alu 134 302 -10 323 303 0 0 chr10 67696574 67696663 -77892625 - MER3 DNA MER1_type -103 106 18 666 80 0 0 chr10 67696783 67696871 -77892417 + AluS SINE Alu 1 88 -224 276 305 76 23 chr10 67696971 67697102 -77892186 - L2 LINE L2 -203 3110 2973 341 296 47 41 chr10 67697128 67697300 -77891988 - L2 LINE L2 -1528 1786 1614 193 308 72 82 chr10 67697389 67697584 -77891704 + L2 LINE L2 2725 2917 -397 309 68 0 0 chr10 67697642 67697686 -77891602 + (T)n Simple_repeat Simple_repeat 1 44 0 422 330 17 103 chr10 67697691 67698039 -77891249 + L2 LINE L2 2955 3272 0 256 346 40 0 chr10 67698301 67698402 -77890886 - MIR SINE MIR -131 131 27 2366 93 3 0 chr10 67698761 67699071 -77890217 + AluY SINE Alu 1 311 0 2222 96 7 3 chr10 67699622 67699925 -77889363 + AluY SINE Alu 1 304 -7 23 0 0 0 chr10 67700028 67700051 -77889237 + AT_rich Low_complexity Low_complexity 1 23 0 537 254 101 0 chr10 67700180 67700318 -77888970 - MIR SINE MIR 0 262 111 745 317 130 18 chr10 67701474 67702021 -77887267 - L2 LINE L2 -55 3258 2639 1217 164 133 31 chr10 67702021 67702277 -77887011 + AluJo SINE Alu 1 282 -30 2345 72 0 16 chr10 67702296 67702600 -77886688 + AluY SINE Alu 1 299 -12 386 170 81 5 chr10 67702859 67702963 -77886325 - MER5A DNA MER1_type -37 152 31 9567 196 66 31 chr10 67703863 67704627 -77884661 - L1MC1 LINE L1 0 6613 5877 2259 106 0 3 chr10 67704627 67704929 -77884359 + AluSx SINE Alu 1 301 -11 9567 196 66 31 chr10 67704929 67707273 -77882015 - L1MC1 LINE L1 -736 5877 3616 2345 81 0 3 chr10 67707273 67707568 -77881720 - AluY SINE Alu -17 294 1 9567 196 66 31 chr10 67707568 67708602 -77880686 - L1MC1 LINE L1 -2997 3616 2620 1160 208 0 63 chr10 67708602 67708695 -77880593 - MER8 DNA MER2_type 0 239 142 2159 97 0 23 chr10 67708695 67708995 -77880293 + AluSg SINE Alu 1 293 -17 1160 208 0 63 chr10 67708995 67709156 -77880132 - MER8 DNA MER2_type -97 142 1 9567 196 66 31 chr10 67709156 67710399 -77878889 - L1MC1 LINE L1 -3993 2620 1422 5294 119 19 13 chr10 67710399 67710896 -77878392 + L1PA16 LINE L1 4814 5307 -859 2216 70 0 3 chr10 67710896 67711212 -77878076 + AluY SINE Alu 1 315 0 5294 119 19 13 chr10 67711212 67712057 -77877231 + L1PA16 LINE L1 5307 6163 -3 9567 196 66 31 chr10 67712057 67713050 -77876238 - L1MC1 LINE L1 -5191 1422 18 330 292 80 0 chr10 67713120 67713233 -77876055 - L1M4 LINE L1 -890 5256 5135 2282 125 0 0 chr10 67715052 67715357 -77873931 - AluSx SINE Alu -6 306 2 238 262 24 12 chr10 67715527 67715611 -77873677 - MER20B DNA MER1_type 0 783 699 630 259 201 18 chr10 67715771 67716114 -77873174 - MER20B DNA MER1_type -357 426 21 271 346 62 19 chr10 67716182 67716344 -77872944 + MIR SINE MIR 46 214 -48 189 269 11 108 chr10 67717500 67717593 -77871695 - MIR SINE MIR -80 182 99 355 310 58 77 chr10 67718442 67718703 -77870585 + L1M2 LINE L1 765 1020 -5829 * 477 308 92 85 chr10 67718550 67719346 -77869942 - L1M2 LINE L1 -5604 1245 586 215 276 65 94 chr10 67720542 67720624 -77868664 - L2 LINE L2 -191 3081 3005 1774 167 3 14 chr10 67720624 67720918 -77868370 + AluJo SINE Alu 12 302 -10 215 276 65 94 chr10 67720918 67721005 -77868283 - L2 LINE L2 -267 3005 2917 277 346 62 15 chr10 67721687 67721701 -77867587 + MIR SINE MIR 47 59 -203 1978 128 10 30 chr10 67721701 67722006 -77867282 - AluSx SINE Alu -13 299 1 277 346 62 15 chr10 67722006 67722121 -77867167 + MIR SINE MIR 59 182 -80 1217 114 6 0 chr10 67722121 67722287 -77867001 + AluSg/x SINE Alu 128 294 -16 180 250 83 42 chr10 67722287 67722359 -77866929 + MIR SINE MIR 170 244 -18 355 361 19 34 chr10 67722401 67722606 -77866682 + MIR3 SINE MIR 4 205 -3 2155 111 0 0 chr10 67722684 67722964 -77866324 - AluSq SINE Alu -17 296 17 217 318 61 0 chr10 67723118 67723184 -77866104 + MIR SINE MIR 7 76 -186 351 253 0 0 chr10 67723205 67723280 -77866008 + MIR SINE MIR 181 255 -7 267 272 26 82 chr10 67723537 67723805 -77865483 - L1ME LINE L1 -345 5776 5524 24 0 0 0 chr10 67723932 67723956 -77865332 + AT_rich Low_complexity Low_complexity 1 24 0 3277 255 107 54 chr10 67724442 67724651 -77864637 + L2 LINE L2 1584 1781 -1532 1899 160 0 29 chr10 67724651 67724958 -77864330 + AluJb SINE Alu 1 298 -14 3277 255 107 54 chr10 67724958 67726130 -77863158 + L2 LINE L2 1781 3042 -271 216 258 16 16 chr10 67726204 67726266 -77863022 + L2 LINE L2 3180 3241 -72 203 0 0 36 chr10 67726707 67726735 -77862553 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1771 141 3 34 chr10 67726737 67727028 -77862260 - AluJo SINE Alu -30 282 1 2263 94 0 10 chr10 67727038 67727336 -77861952 - AluSq SINE Alu -14 299 5 816 160 216 28 chr10 67728554 67728735 -77860553 - MER20 DNA MER1_type -4 215 1 603 170 165 60 chr10 67728788 67728970 -77860318 - MER3 DNA MER1_type 0 209 9 2150 68 29 0 chr10 67729664 67729945 -77859343 + AluY SINE Alu 23 311 0 1600 120 0 29 chr10 67729948 67730189 -77859099 + AluJb SINE Alu 72 305 -7 289 304 98 43 chr10 67730221 67730405 -77858883 + L3 LINE CR1 1272 1465 -112 2182 101 3 3 chr10 67730972 67731269 -77858019 - AluSx SINE Alu -15 297 1 1890 188 3 0 chr10 67731505 67731809 -77857479 - AluJo SINE Alu -5 307 3 506 299 60 31 chr10 67732586 67733174 -77856114 + L1ME3 LINE L1 4458 5062 -1084 617 289 88 25 chr10 67733254 67733493 -77855795 - MIR SINE MIR -4 258 5 1253 265 53 35 chr10 67733893 67734577 -77854711 + L1ME3 LINE L1 5262 5957 -207 2315 108 0 0 chr10 67735713 67736018 -77853270 + AluSx SINE Alu 1 305 -7 279 237 124 10 chr10 67736085 67736182 -77853106 + 7SK RNA RNA 3 110 -83 772 169 0 16 chr10 67736774 67736898 -77852390 + FLAM_A SINE Alu 2 123 -10 365 243 56 65 chr10 67737018 67737125 -77852163 - MER5B DNA MER1_type -42 136 31 207 359 26 39 chr10 67737350 67737506 -77851782 + L3 LINE CR1 321 474 -1103 383 247 108 38 chr10 67737716 67737874 -77851414 + HAL1b LINE L1 747 915 -433 412 289 190 24 chr10 67737880 67738012 -77851276 + HAL1b LINE L1 954 1063 -285 623 224 0 15 chr10 67738012 67738146 -77851142 - FLAM_C SINE Alu 0 133 2 412 289 190 24 chr10 67738146 67738345 -77850943 + HAL1b LINE L1 1063 1340 -8 21 36 0 0 chr10 67738384 67738412 -77850876 + AT_rich Low_complexity Low_complexity 1 28 0 2218 109 13 0 chr10 67739329 67739633 -77849655 - AluSx SINE Alu 0 312 5 415 195 0 0 chr10 67740389 67740476 -77848812 - MLT1H1 LTR MaLR -2 553 467 1028 204 0 15 chr10 67740561 67740762 -77848526 - AluJo SINE Alu -16 296 99 272 313 175 12 chr10 67740928 67741088 -77848200 - L2 LINE L2 -1 3312 3127 * 539 230 133 12 chr10 67741078 67741243 -77848045 - MIR SINE MIR 0 262 78 23 0 0 0 chr10 67742425 67742448 -77846840 + AT_rich Low_complexity Low_complexity 1 23 0 899 163 33 11 chr10 67742448 67742632 -77846656 - L1MA5A LINE L1 -44 6253 6066 2326 96 7 0 chr10 67742632 67742934 -77846354 - AluSc SINE Alu -5 304 1 876 86 0 0 chr10 67742942 67743058 -77846230 - AluSg/x SINE Alu -5 307 192 1018 222 225 30 chr10 67743168 67743661 -77845627 - L2 LINE L2 -239 3074 2490 216 227 0 45 chr10 67743663 67743729 -77845559 - L2 LINE L2 -1102 2212 2150 943 245 52 87 chr10 67743729 67744188 -77845100 + L1M4 LINE L1 4625 5054 -1092 2388 89 0 0 chr10 67744188 67744481 -77844807 - AluSg SINE Alu -17 293 1 943 245 52 87 chr10 67744481 67744698 -77844590 + L1M4 LINE L1 5054 5277 -869 1593 183 4 0 chr10 67746547 67746810 -77842478 + AluJo SINE Alu 1 264 -48 1144 174 103 4 chr10 67746816 67747069 -77842219 + L1MC3 LINE L1 6246 6523 -1262 4065 165 145 25 chr10 67748282 67749274 -77840014 + L1MC3 LINE L1 6673 7783 -2 272 278 68 68 chr10 67749273 67749384 -77839904 - L1MC4 LINE L1 -161 7881 7771 * 2283 98 0 23 chr10 67749384 67749690 -77839598 + AluY SINE Alu 1 299 -12 272 278 68 68 chr10 67749690 67749844 -77839444 - L1MC4 LINE L1 -270 7772 7616 224 206 27 82 chr10 67750633 67750706 -77838582 + L2 LINE L2 3233 3301 -12 2450 53 0 13 chr10 67751078 67751378 -77837910 + AluY SINE Alu 1 296 -15 343 301 116 27 chr10 67751783 67751929 -77837359 + MIR SINE MIR 7 165 -97 2014 94 60 20 chr10 67753385 67753683 -77835605 - AluSx SINE Alu -2 310 1 2591 0 0 0 chr10 67753831 67754196 -77835092 - AluYa5 SINE Alu 0 365 1 1083 159 68 47 chr10 67754359 67754655 -77834633 + MER63B DNA MER1_type 1 302 -134 204 222 22 0 chr10 67754823 67754868 -77834420 - MER5B DNA MER1_type -129 49 4 325 262 63 16 chr10 67755544 67755670 -77833618 + MER117 DNA MER1_type 65 196 -1 1360 138 178 16 chr10 67755766 67756019 -77833269 + AluSg1 SINE Alu 1 294 -15 22 35 0 0 chr10 67756378 67756407 -77832881 + AT_rich Low_complexity Low_complexity 1 29 0 689 272 63 13 chr10 67756823 67757062 -77832226 + MIR SINE MIR 12 262 0 353 258 20 33 chr10 67757134 67757285 -77832003 + L1ME4a LINE L1 5784 5932 -189 312 255 9 57 chr10 67757390 67757496 -77831792 + L1MC5 LINE L1 7832 7932 -29 2198 116 3 3 chr10 67759517 67759818 -77829470 - AluSx SINE Alu -11 301 1 2114 171 26 0 chr10 67760098 67760478 -77828810 + MLT1B LTR MaLR 1 390 0 931 124 0 0 chr10 67760566 67760703 -77828585 + L1MC3 LINE L1 6668 6804 -981 638 153 0 0 chr10 67760703 67760801 -77828487 - Tigger7 DNA MER2_type 0 2487 2390 428 161 0 69 chr10 67760803 67760890 -77828398 - Tigger7 DNA MER2_type -287 263 183 2522 182 93 5 chr10 67760898 67761476 -77827812 + L1MC3 LINE L1 7118 7746 -39 2057 141 7 0 chr10 67761602 67761899 -77827389 + AluSx SINE Alu 1 299 -13 237 302 93 0 chr10 67761993 67762079 -77827209 + L1ME4a LINE L1 5539 5632 -2176 1939 136 3 11 chr10 67762237 67762523 -77826765 + AluSx SINE Alu 1 284 -28 227 265 51 10 chr10 67762946 67763044 -77826244 + L1ME4a LINE L1 5991 6092 -29 2348 74 3 3 chr10 67763148 67763445 -77825843 - AluY SINE Alu -14 297 1 24 32 0 0 chr10 67763445 67763476 -77825812 + AT_rich Low_complexity Low_complexity 1 31 0 2086 165 104 51 chr10 67764458 67764966 -77824322 - L1MB5 LINE L1 0 6174 5640 517 216 101 75 chr10 67765457 67765527 -77823761 - MER5C DNA MER1_type 0 324 257 2385 73 0 3 chr10 67765527 67765828 -77823460 - AluY SINE Alu -11 300 1 517 216 101 75 chr10 67765828 67765912 -77823376 - MER5C DNA MER1_type -67 257 177 1949 157 0 26 chr10 67765912 67766224 -77823064 - AluJo SINE Alu -8 304 1 517 216 101 75 chr10 67766224 67766374 -77822914 - MER5C DNA MER1_type -147 177 11 2019 145 3 0 chr10 67766921 67767210 -77822078 + AluJb SINE Alu 1 290 -22 241 88 0 0 chr10 67767456 67767490 -77821798 + U2 snRNA snRNA 1 34 -154 704 86 60 0 chr10 67767709 67767825 -77821463 - L1PA13 LINE L1 -2 6161 6039 1929 133 0 14 chr10 67768094 67768373 -77820915 + AluJb SINE Alu 1 275 -37 1593 192 79 58 chr10 67768528 67768997 -77820291 - MLT1D LTR MaLR -22 483 5 279 355 125 28 chr10 67769002 67769179 -77820109 - MIR3 SINE MIR -64 198 3 1727 80 13 8 chr10 67769567 67769806 -77819482 - L1PA8 LINE L1 -1 6171 5932 613 191 116 5 chr10 67769923 67770112 -77819176 + L2 LINE L2 3104 3313 0 1017 268 97 73 chr10 67771232 67772109 -77817179 - HAL1 LINE L1 0 2507 1590 2369 95 7 0 chr10 67772109 67772413 -77816875 - AluSg SINE Alu -2 308 3 1017 268 97 73 chr10 67772413 67772777 -77816511 - HAL1 LINE L1 -917 1590 1236 308 268 97 119 chr10 67772964 67773073 -77816215 - L2 LINE L2 -1 3312 3202 1625 181 0 21 chr10 67773073 67773354 -77815934 + AluJo SINE Alu 9 283 -29 308 268 97 119 chr10 67773354 67773647 -77815641 - L2 LINE L2 -111 3202 2919 301 276 69 25 chr10 67773663 67773816 -77815472 + MIR SINE MIR 7 162 -62 8702 118 16 8 chr10 67774177 67775643 -77813645 + L1P LINE L1 3595 5073 -1073 897 123 7 41 chr10 67775912 67776058 -77813230 - AluJb SINE Alu -171 141 1 369 216 3 9 chr10 67776925 67777018 -77812270 + AluS SINE Alu 1 71 -232 36 53 0 0 chr10 67777698 67777755 -77811533 + AT_rich Low_complexity Low_complexity 1 57 0 28 0 0 0 chr10 67777789 67777817 -77811471 + AT_rich Low_complexity Low_complexity 1 28 0 854 178 14 0 chr10 67777836 67777982 -77811306 + AluJb SINE Alu 165 312 0 1771 164 9 28 chr10 67778170 67778488 -77810800 - AluJb SINE Alu 0 312 1 2490 67 0 0 chr10 67779156 67779454 -77809834 + AluY SINE Alu 1 298 -13 1987 141 3 3 chr10 67779463 67779787 -77809501 + AluSx SINE Alu 1 312 0 243 189 161 70 chr10 67779946 67780089 -77809199 + L1MC4 LINE L1 7864 8019 -23 1149 76 0 0 chr10 67780353 67780511 -77808777 + L1PA8 LINE L1 5949 6106 -66 2211 108 0 10 chr10 67781296 67781592 -77807696 - AluSg SINE Alu -17 293 1 555 128 0 0 chr10 67781797 67781883 -77807405 - L1PA8 LINE L1 -8 6164 6079 1638 171 45 39 chr10 67782436 67782746 -77806542 + AluJb SINE Alu 1 312 0 957 233 0 0 chr10 67782870 67783059 -77806229 + MER5A DNA MER1_type 1 189 0 192 238 286 19 chr10 67783073 67783178 -77806110 - MIR SINE MIR -108 154 22 209 253 38 38 chr10 67783283 67783362 -77805926 + MIR SINE MIR 118 196 -66 1615 171 10 20 chr10 67783781 67784079 -77805209 - AluJb SINE Alu -17 295 1 864 258 122 41 chr10 67784209 67784817 -77804471 - L1ME4a LINE L1 -83 6038 5382 332 258 35 76 chr10 67784902 67785100 -77804188 - LTR1B LTR ERV1 0 826 637 247 315 87 22 chr10 67785351 67785443 -77803845 + L2 LINE L2 3147 3244 -28 180 0 0 0 chr10 67786177 67786197 -77803091 + (T)n Simple_repeat Simple_repeat 1 20 0 2334 81 0 19 chr10 67787336 67787643 -77801645 + AluY SINE Alu 1 301 -10 23 54 0 0 chr10 67788014 67788051 -77801237 + AT_rich Low_complexity Low_complexity 1 37 0 305 281 144 62 chr10 67788200 67788360 -77800928 - MER5B DNA MER1_type 0 178 6 475 276 164 0 chr10 67788383 67788535 -77800753 + MER5A DNA MER1_type 13 189 0 2148 134 0 7 chr10 67788870 67789169 -77800119 - AluJo SINE Alu -15 297 1 1627 179 24 7 chr10 67789601 67789891 -77799397 - AluJo SINE Alu -17 295 1 469 279 81 10 chr10 67789892 67790089 -77799199 - HAL1 LINE L1 -1550 957 747 227 103 26 0 chr10 67790089 67790128 -77799160 + GA-rich Low_complexity Low_complexity 2 41 0 1105 179 0 10 chr10 67791418 67791613 -77797675 + AluJo SINE Alu 112 304 -8 1876 139 7 0 chr10 67791865 67792145 -77797143 - AluSx SINE Alu -30 282 1 21 89 0 0 chr10 67792858 67792914 -77796374 + AT_rich Low_complexity Low_complexity 1 56 0 216 0 0 0 chr10 67792937 67792961 -77796327 + (TTG)n Simple_repeat Simple_repeat 2 25 0 1698 174 4 4 chr10 67792976 67793251 -77796037 - AluJo SINE Alu -37 275 1 652 101 0 0 chr10 67793565 67793654 -77795634 + AluSg/x SINE Alu 201 289 -21 760 274 123 27 chr10 67793655 67794063 -77795225 + HAL1 LINE L1 1463 1909 -598 2200 113 0 7 chr10 67794128 67794419 -77794869 + AluSq SINE Alu 1 289 -24 181 0 69 0 chr10 67794430 67794459 -77794829 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 250 215 280 5 chr10 67794602 67794802 -77794486 + HAL1 LINE L1 2020 2274 -233 319 294 130 0 chr10 67795318 67795410 -77793878 - L2 LINE L2 -2 3311 3208 2531 66 0 0 chr10 67795523 67795826 -77793462 + AluY SINE Alu 1 303 -8 432 338 23 15 chr10 67797271 67797404 -77791884 + MIR3 SINE MIR 54 187 -21 933 189 63 19 chr10 67797406 67797612 -77791676 + MER20 DNA MER1_type 1 215 -4 541 85 51 25 chr10 67798755 67798873 -77790415 + CT-rich Low_complexity Low_complexity 4 124 0 866 219 0 0 chr10 67798876 67799040 -77790248 - FRAM SINE Alu -1 165 2 22 0 0 0 chr10 67799070 67799092 -77790196 + AT_rich Low_complexity Low_complexity 1 22 0 996 175 0 0 chr10 67801281 67801458 -77787830 + MER3 DNA MER1_type 23 199 -10 2091 121 0 3 chr10 67801662 67801952 -77787336 + AluSc SINE Alu 1 289 -20 566 63 13 0 chr10 67801952 67802031 -77787257 + (GGAA)n Simple_repeat Simple_repeat 1 80 0 423 326 33 55 chr10 67802240 67802513 -77786775 - L1ME2 LINE L1 -220 5944 5678 216 0 0 0 chr10 67802516 67802540 -77786748 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 237 253 32 0 chr10 67803204 67803277 -77786011 + MIR SINE MIR 78 153 -55 243 62 0 0 chr10 67803489 67803521 -77785767 + MER69 DNA AcHobo 1 32 -2494 2291 107 3 3 chr10 67803691 67804000 -77785288 - AluSx SINE Alu -3 309 1 357 182 53 68 chr10 67804002 67804134 -77785154 + MER69 DNA AcHobo 2396 2525 -1 334 228 76 11 chr10 67804241 67804333 -77784955 + MIR3 SINE MIR 90 187 -21 24 0 0 0 chr10 67804374 67804398 -77784890 + AT_rich Low_complexity Low_complexity 1 24 0 2331 95 0 7 chr10 67804512 67804817 -77784471 - AluSg SINE Alu -7 303 1 464 257 62 7 chr10 67805250 67805394 -77783894 - MIR3 SINE MIR -2 206 55 244 212 282 0 chr10 67805583 67805668 -77783620 + MER34 LTR ERV1 6 114 -428 569 128 11 43 chr10 67806458 67806552 -77782736 - AluJ/FLAM SINE Alu -221 91 1 2215 81 0 0 chr10 67806648 67806920 -77782368 + AluSg SINE Alu 5 276 -34 261 75 0 0 chr10 67806927 67806967 -77782321 + (CATA)n Simple_repeat Simple_repeat 2 41 0 1552 272 113 17 chr10 67807020 67807307 -77781981 + HAL1 LINE L1 8 266 -2241 1079 210 30 66 chr10 67807307 67807612 -77781676 + AluJo SINE Alu 1 294 -8 1552 272 113 17 chr10 67807612 67807982 -77781306 + HAL1 LINE L1 266 728 -1779 568 127 52 67 chr10 67807986 67808030 -77781258 + MLT1C LTR MaLR 1 44 -423 1484 187 55 42 chr10 67808030 67808415 -77780873 + MLT1B LTR MaLR 1 390 0 568 127 52 67 chr10 67808415 67808504 -77780784 + MLT1C LTR MaLR 44 132 -335 * 585 260 83 47 chr10 67808491 67808791 -77780497 + MLT1C LTR MaLR 152 462 -5 1534 260 137 67 chr10 67808795 67809009 -77780279 + HAL1 LINE L1 730 928 -1579 2212 95 3 0 chr10 67809009 67809322 -77779966 + AluSp SINE Alu 1 314 0 1534 260 137 67 chr10 67809322 67809890 -77779398 + HAL1 LINE L1 928 1455 -1052 2369 95 7 0 chr10 67809890 67810194 -77779094 + AluSg SINE Alu 3 308 -2 1534 260 137 67 chr10 67810194 67811071 -77778217 + HAL1 LINE L1 1455 2507 0 613 191 116 5 chr10 67812193 67812382 -77776906 - L2 LINE L2 0 3313 3104 1727 80 13 8 chr10 67812499 67812738 -77776550 + L1PA8 LINE L1 5932 6171 -1 228 350 110 9 chr10 67813128 67813300 -77775988 + MIR SINE MIR 7 198 -64 1538 195 79 59 chr10 67813305 67813776 -77775512 + MLT1D LTR MaLR 4 483 -22 1929 133 0 14 chr10 67813931 67814210 -77775078 - AluJb SINE Alu -37 275 1 704 86 60 0 chr10 67814479 67814595 -77774693 + L1PA13 LINE L1 6039 6161 -2 241 88 0 0 chr10 67814814 67814848 -77774440 - U2 snRNA snRNA -154 34 1 2019 145 3 0 chr10 67815094 67815383 -77773905 - AluJb SINE Alu -22 290 1 489 209 111 85 chr10 67815930 67816080 -77773208 + MER5C DNA MER1_type 11 156 -168 1949 157 0 26 chr10 67816080 67816392 -77772896 + AluJo SINE Alu 1 304 -8 489 209 111 85 chr10 67816392 67816476 -77772812 + MER5C DNA MER1_type 156 236 -88 2385 73 0 3 chr10 67816476 67816777 -77772511 + AluY SINE Alu 1 300 -11 489 209 111 85 chr10 67816777 67816847 -77772441 + MER5C DNA MER1_type 236 324 0 2086 165 104 51 chr10 67817338 67817846 -77771442 + L1MB5 LINE L1 5640 6174 0 24 32 0 0 chr10 67818828 67818859 -77770429 + AT_rich Low_complexity Low_complexity 1 31 0 2440 77 0 13 chr10 67818859 67819172 -77770116 + AluSx SINE Alu 1 309 -3 1719 157 0 0 chr10 67819295 67819543 -77769745 + AluJb SINE Alu 11 258 -54 290 223 0 61 chr10 67819820 67819939 -77769349 - L2 LINE L2 -306 2966 2857 305 221 95 44 chr10 67819985 67820143 -77769145 + L1ME4a LINE L1 5956 6121 0 362 279 40 138 chr10 67820491 67820789 -77768499 - L2 LINE L2 0 3272 3004 343 350 18 12 chr10 67820905 67821068 -77768220 - L2 LINE L2 -558 2756 2593 2217 101 7 3 chr10 67821140 67821436 -77767852 + AluSx SINE Alu 1 297 -15 339 175 0 0 chr10 67821531 67821588 -77767700 + AluS SINE Alu 1 57 -244 261 0 0 0 chr10 67821622 67821651 -77767637 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 274 253 13 0 chr10 67821776 67821851 -77767437 - L1ME4a LINE L1 -94 6027 5952 538 260 113 3 chr10 67821979 67822227 -77767061 - L1ME4a LINE L1 -346 5775 5499 543 237 207 61 chr10 67822229 67822710 -77766578 + MLT1G1 LTR MaLR 1 592 -3 577 325 66 51 chr10 67822872 67823399 -77765889 - L1ME4a LINE L1 -851 5295 4761 2223 111 0 0 chr10 67823675 67823972 -77765316 + AluSg SINE Alu 1 297 -13 402 192 0 0 chr10 67824180 67824258 -77765030 - AluSg/x SINE Alu -16 293 216 1800 115 4 0 chr10 67825046 67825325 -77763963 + L1M2 LINE L1 5409 5688 -612 255 61 0 0 chr10 67825330 67825363 -77763925 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 2071 99 14 11 chr10 67825368 67825650 -77763638 - AluSq SINE Alu -30 283 1 891 233 82 0 chr10 67825652 67825897 -77763391 - HAL1 LINE L1 -1035 1472 1208 269 155 398 29 chr10 67826477 67826580 -77762708 - MIR SINE MIR -14 248 108 21 36 0 0 chr10 67827082 67827110 -77762178 + AT_rich Low_complexity Low_complexity 1 28 0 259 182 0 0 chr10 67827482 67827537 -77761751 - AluJo SINE Alu -2 300 246 1164 166 0 6 chr10 67827537 67827712 -77761576 - AluJo SINE Alu -138 174 1 2426 77 0 0 chr10 67827719 67828019 -77761269 - AluY SINE Alu -11 300 1 2200 125 0 13 chr10 67828019 67828324 -77760964 - AluSx SINE Alu -11 301 1 2149 107 20 3 chr10 67828594 67828892 -77760396 - AluSq SINE Alu -10 303 1 322 250 19 96 chr10 67829554 67829581 -77759707 + MLT1I LTR MaLR 240 268 -141 829 216 6 0 chr10 67829581 67829743 -77759545 + FRAM SINE Alu 1 163 -3 322 250 19 96 chr10 67829743 67829871 -77759417 + MLT1I LTR MaLR 268 383 -26 2301 109 0 3 chr10 67830644 67830947 -77758341 + AluSx SINE Alu 1 302 -10 216 311 7 147 chr10 67831259 67831532 -77757756 - L2 LINE L2 -2715 599 365 * 225 320 49 41 chr10 67831531 67831653 -77757635 - MIR3 SINE MIR -72 136 14 1468 154 56 56 chr10 67832121 67832426 -77756862 - AluJb SINE Alu -7 305 1 349 275 18 9 chr10 67832979 67833088 -77756200 - MIR SINE MIR -49 213 104 440 18 0 0 chr10 67833433 67833490 -77755798 - AluY SINE Alu -261 57 1 2413 91 0 7 chr10 67833605 67833913 -77755375 - AluSx SINE Alu -6 306 1 197 32 0 32 chr10 67835383 67835414 -77753874 + (CAAAAA)n Simple_repeat Simple_repeat 2 31 0 592 196 10 0 chr10 67836308 67836410 -77752878 + FLAM_A SINE Alu 16 118 -24 2398 107 0 0 chr10 67836427 67836736 -77752552 + AluSx SINE Alu 1 309 -3 486 292 6 6 chr10 67836803 67836964 -77752324 - LTR33 LTR ERVL -54 467 307 532 255 75 61 chr10 67837006 67837218 -77752070 - LTR33 LTR ERVL -305 216 2 1276 253 113 32 chr10 67837222 67837954 -77751334 + L2 LINE L2 2509 3313 0 244 241 92 23 chr10 67838790 67838877 -77750411 + MLT1J1 LTR MaLR 188 280 -166 315 264 44 0 chr10 67839598 67839689 -77749599 + L2 LINE L2 3219 3313 0 838 134 0 0 chr10 67839690 67839809 -77749479 + FLAM_C SINE Alu 1 119 -24 25 0 0 0 chr10 67839816 67839841 -77749447 + AT_rich Low_complexity Low_complexity 1 25 0 26 50 0 0 chr10 67840007 67840047 -77749241 + AT_rich Low_complexity Low_complexity 1 40 0 328 276 11 40 chr10 67841042 67841216 -77748072 + GA-rich Low_complexity Low_complexity 5 173 0 960 173 12 0 chr10 67841474 67841642 -77747646 + AluJb SINE Alu 136 305 -7 399 249 178 18 chr10 67841650 67841819 -77747469 + L3 LINE CR1 1297 1492 -85 285 209 104 78 chr10 67842048 67842163 -77747125 + MER5A DNA MER1_type 44 161 -28 450 0 0 0 chr10 67842580 67842630 -77746658 + (CA)n Simple_repeat Simple_repeat 2 51 0 382 227 176 42 chr10 67842871 67842990 -77746298 + L2 LINE L2 3138 3272 0 2682 103 5 36 chr10 67844199 67844536 -77744752 + THE1C LTR MaLR 1 327 -48 2114 113 3 0 chr10 67844536 67844849 -77744439 + AluSx SINE Alu 1 314 0 2682 103 5 36 chr10 67844849 67844897 -77744391 + THE1C LTR MaLR 327 375 0 381 302 93 14 chr10 67844897 67845036 -77744252 - MIR SINE MIR -108 154 5 24 0 0 0 chr10 67845251 67845275 -77744013 + AT_rich Low_complexity Low_complexity 1 24 0 2020 172 61 0 chr10 67845492 67845835 -77743453 + MLT1A1 LTR MaLR 1 364 -1 180 182 30 0 chr10 67845840 67845873 -77743415 + MER5B DNA MER1_type 7 40 -138 2231 123 0 0 chr10 67845923 67846225 -77743063 + AluSx SINE Alu 1 302 -10 312 223 32 75 chr10 67846240 67846334 -77742954 + MER5B DNA MER1_type 78 167 -11 2085 108 4 0 chr10 67846714 67846992 -77742296 + AluSx SINE Alu 25 303 -9 2296 104 0 3 chr10 67848470 67848769 -77740519 - AluSc SINE Alu -11 298 1 524 303 38 96 chr10 67848858 67849172 -77740116 + L2 LINE L2 2972 3267 -5 208 283 33 0 chr10 67849200 67849260 -77740028 - MIR3 SINE MIR -6 202 141 2213 123 0 0 chr10 67849773 67850073 -77739215 + AluSx SINE Alu 1 300 -12 198 103 0 0 chr10 67850087 67850116 -77739172 + (A)n Simple_repeat Simple_repeat 1 29 0 717 276 25 65 chr10 67850303 67850424 -77738864 - MER58A DNA MER1_type -2224 196 85 2334 99 3 0 chr10 67850424 67850727 -77738561 - AluSx SINE Alu -8 304 1 717 276 25 65 chr10 67850727 67850804 -77738484 - MER58A DNA MER1_type -2335 85 6 978 87 0 8 chr10 67851149 67851275 -77738013 + AluSg SINE Alu 1 125 -185 24 32 0 0 chr10 67851275 67851306 -77737982 + AT_rich Low_complexity Low_complexity 1 31 0 2163 110 4 0 chr10 67851315 67851626 -77737662 + AluSx SINE Alu 2 313 0 319 317 68 43 chr10 67851683 67851844 -77737444 + HAL1b LINE L1 39 203 -1145 25 90 0 0 chr10 67851970 67852037 -77737251 + AT_rich Low_complexity Low_complexity 1 67 0 2255 105 0 10 chr10 67852275 67852579 -77736709 - AluSx SINE Alu -11 301 1 330 276 20 20 chr10 67852818 67852916 -77736372 + L2 LINE L2 2549 2646 -668 2299 87 34 0 chr10 67852937 67853235 -77736053 + AluSp SINE Alu 1 308 -5 3806 99 0 6 chr10 67853262 67853777 -77735511 + L1PB1 LINE L1 5638 6149 -2 1921 157 0 13 chr10 67854994 67855293 -77733995 + AluJo SINE Alu 1 295 -17 2010 212 78 16 chr10 67855690 67856189 -77733099 + MLT1F LTR MaLR 13 542 0 1951 92 57 11 chr10 67856959 67857242 -77732046 - AluSg1 SINE Alu -13 296 1 269 185 111 25 chr10 67857244 67857325 -77731963 - MIR SINE MIR -70 192 105 285 356 62 18 chr10 67857460 67857649 -77731639 + MIR3 SINE MIR 8 201 -44 181 310 17 0 chr10 67857666 67857724 -77731564 + MIR SINE MIR 84 142 -120 746 270 86 59 chr10 67857786 67858194 -77731094 + LTR16A LTR ERVL 25 443 -7 2194 75 14 14 chr10 67858592 67858885 -77730403 + AluSp SINE Alu 1 293 -20 978 34 0 0 chr10 67858885 67859003 -77730285 + (GGAA)n Simple_repeat Simple_repeat 3 120 0 21 0 0 0 chr10 67859477 67859498 -77729790 + AT_rich Low_complexity Low_complexity 1 21 0 1710 176 3 14 chr10 67860025 67860160 -77729128 + AluJb SINE Alu 1 136 -176 2292 112 3 0 chr10 67860160 67860465 -77728823 + AluSp SINE Alu 2 307 -6 1710 176 3 14 chr10 67860465 67860624 -77728664 + AluJb SINE Alu 136 292 -20 312 231 0 0 chr10 67860624 67860702 -77728586 + (TA)n Simple_repeat Simple_repeat 1 78 0 2445 50 7 10 chr10 67861069 67861367 -77727921 - AluY SINE Alu -14 297 1 29 0 0 0 chr10 67862068 67862097 -77727191 + AT_rich Low_complexity Low_complexity 1 29 0 501 219 90 13 chr10 67862221 67862376 -77726912 + L1ME4a LINE L1 5944 6110 -11 2271 116 0 0 chr10 67862385 67862688 -77726600 + AluSx SINE Alu 1 303 -9 247 329 71 7 chr10 67862800 67862940 -77726348 - L2 LINE L2 -567 2747 2599 2403 97 7 0 chr10 67863548 67863857 -77725431 - AluSx SINE Alu -1 311 1 294 241 0 0 chr10 67863898 67863956 -77725332 + L2 LINE L2 3215 3272 0 196 232 87 29 chr10 67864337 67864406 -77724882 - L3 LINE CR1 -3 1574 1502 2184 61 0 4 chr10 67864755 67865019 -77724269 - AluY SINE Alu -19 292 30 908 170 50 6 chr10 67865117 67865299 -77723989 - MIR SINE MIR -24 238 49 1255 280 52 25 chr10 67865547 67866286 -77723002 - L2 LINE L2 -17 3296 2533 2393 107 0 0 chr10 67867533 67867843 -77721445 + AluSg SINE Alu 1 310 0 2035 122 31 7 chr10 67867847 67867966 -77721322 + AluSc SINE Alu 1 116 -193 255 93 0 0 chr10 67867966 67868009 -77721279 + (CAAAA)n Simple_repeat Simple_repeat 3 45 0 2035 122 31 7 chr10 67868009 67868183 -77721105 + AluSc SINE Alu 116 301 -8 976 121 8 0 chr10 67868294 67868426 -77720862 - FLAM_C SINE Alu 0 133 1 194 262 0 24 chr10 67868970 67869012 -77720276 + L2 LINE L2 3141 3181 -91 236 277 59 114 chr10 67869154 67869293 -77719995 - MIR SINE MIR -2 260 136 1543 186 3 18 chr10 67869293 67869578 -77719710 + AluJo SINE Alu 2 282 -30 236 277 59 114 chr10 67869578 67869658 -77719630 - MIR SINE MIR -126 136 53 1997 139 10 13 chr10 67873588 67873889 -77715399 - AluJb SINE Alu -12 300 1 26 0 0 0 chr10 67874077 67874103 -77715185 + AT_rich Low_complexity Low_complexity 1 26 0 1859 157 10 7 chr10 67874154 67874447 -77714841 - AluJb SINE Alu -18 294 1 1651 204 93 11 chr10 67874471 67874838 -77714450 + MLT2C1 LTR ERVL 1 397 0 297 236 34 34 chr10 67875259 67875348 -77713940 - L2 LINE L2 -754 2560 2472 405 0 0 0 chr10 67877347 67877392 -77711896 + (CA)n Simple_repeat Simple_repeat 2 46 0 2415 73 0 0 chr10 67878144 67878444 -77710844 + AluSc SINE Alu 1 300 -9 21 57 0 0 chr10 67879788 67879823 -77709465 + AT_rich Low_complexity Low_complexity 1 35 0 1838 157 22 22 chr10 67880918 67881230 -77708058 + AluJo SINE Alu 1 312 0 180 309 64 64 chr10 67881603 67881713 -77707575 + L2 LINE L2 2944 3053 -219 24 0 0 0 chr10 67881734 67881758 -77707530 + AT_rich Low_complexity Low_complexity 1 24 0 231 236 90 0 chr10 67881758 67881847 -77707441 - L1MC4a LINE L1 -1638 6170 6074 1030 166 57 0 chr10 67882327 67882502 -77706786 - MER5A DNA MER1_type -4 185 1 1918 82 0 8 chr10 67882605 67882848 -77706440 + AluY SINE Alu 1 241 -70 508 197 0 17 chr10 67883181 67883298 -77705990 + AluSg/x SINE Alu 182 296 -13 359 280 89 44 chr10 67883302 67883398 -77705890 - L2 LINE L2 -809 2505 2415 2375 96 3 3 chr10 67883398 67883710 -77705578 + AluSp SINE Alu 1 312 -1 359 280 89 44 chr10 67883710 67883838 -77705450 - L2 LINE L2 -899 2415 2271 338 216 1 0 chr10 67883921 67883990 -77705298 - AluJ/FLAM SINE Alu -239 63 2 815 164 0 0 chr10 67884087 67884209 -77705079 + FLAM_C SINE Alu 1 122 -21 262 357 36 41 chr10 67884431 67884627 -77704661 + MIR SINE MIR 16 210 -52 2170 94 4 0 chr10 67885048 67885381 -77703907 - AluSc SINE Alu 0 334 1 216 86 0 0 chr10 67885385 67885420 -77703868 + (T)n Simple_repeat Simple_repeat 1 35 0 296 79 0 0 chr10 67885943 67885981 -77703307 + AluJo/FLAM SINE Alu 85 122 -180 319 50 0 133 chr10 67885981 67886069 -77703219 - Alu SINE Alu 0 313 234 1544 119 119 0 chr10 67886682 67886942 -77702346 - LTR1B LTR ERV1 -535 291 1 1416 214 49 41 chr10 67886989 67887334 -77701954 + LTR16C LTR ERVL 144 491 0 568 271 112 54 chr10 67888887 67889238 -77700050 - MLT1I LTR MaLR -2 407 38 443 275 16 85 chr10 67889594 67889723 -77699565 + MER5A DNA MER1_type 7 121 -68 2323 80 0 3 chr10 67889723 67890012 -77699276 - AluSg1 SINE Alu -21 288 1 443 275 16 85 chr10 67890012 67890071 -77699217 + MER5A DNA MER1_type 121 182 -7 2510 71 3 0 chr10 67891025 67891334 -77697954 + AluY SINE Alu 2 311 0 2426 220 52 88 chr10 67892865 67893133 -77696155 - L1MC5 LINE L1 -101 7860 7584 1896 164 3 14 chr10 67893133 67893426 -77695862 - AluJo SINE Alu -21 291 2 2426 220 52 88 chr10 67893426 67893560 -77695728 - L1MC5 LINE L1 -377 7584 7447 1118 161 0 12 chr10 67893560 67893728 -77695560 - FRAM SINE Alu 0 166 1 2426 220 52 88 chr10 67893728 67894332 -77694956 - L1MC5 LINE L1 -514 7447 6890 5478 69 62 6 chr10 67894332 67895058 -77694230 + LTR17 LTR ERV1 1 767 -13 207 167 0 0 chr10 67895062 67895098 -77694190 + C-rich Low_complexity Low_complexity 1 36 0 246 62 0 0 chr10 67895206 67895238 -77694050 + (TG)n Simple_repeat Simple_repeat 2 33 0 26 45 0 45 chr10 67895351 67895417 -77693871 + AT_rich Low_complexity Low_complexity 1 63 0 2003 138 6 22 chr10 67895477 67895788 -77693500 + AluSx SINE Alu 1 306 -6 1275 196 25 97 chr10 67895795 67896157 -77693131 - MLT2D LTR ERVL -78 336 1 2144 129 10 0 chr10 67896182 67896492 -77692796 - AluSp SINE Alu 0 313 1 2353 93 3 10 chr10 67896539 67896849 -77692439 + AluSx SINE Alu 1 308 -4 264 253 103 11 chr10 67896931 67897018 -77692270 - L2 LINE L2 -10 3262 3168 515 270 81 26 chr10 67897909 67898291 -77690997 + LTR33A LTR ERVL 62 523 0 242 194 0 32 chr10 67899113 67899175 -77690113 + (TA)n Simple_repeat Simple_repeat 1 60 0 785 204 0 0 chr10 67899348 67899480 -77689808 - FLAM_A SINE Alu 0 133 2 353 262 107 48 chr10 67900124 67900292 -77688996 + MIR3 SINE MIR 16 193 -15 2245 108 0 3 chr10 67900388 67900684 -77688604 + AluSx SINE Alu 1 295 -17 240 200 0 0 chr10 67900733 67900808 -77688480 + (TA)n Simple_repeat Simple_repeat 1 75 0 6743 223 8 13 chr10 67901296 67902949 -77686339 - L1PA12 LINE L1 -2991 4593 2948 4350 222 39 17 chr10 67902946 67903869 -77685419 - L1PA12 LINE L1 -6633 948 6 * 4019 193 39 16 chr10 67903875 67904766 -77684522 - L1 LINE L1 -3014 4551 3640 1959 167 0 0 chr10 67904804 67905098 -77684190 - AluSx SINE Alu -18 294 1 253 213 160 53 chr10 67905098 67905181 -77684107 - L1 LINE L1 -7469 96 1 606 270 162 51 chr10 67905231 67905737 -77683551 - HAL1 LINE L1 -822 1685 1072 588 222 0 0 chr10 67905737 67905854 -77683434 - L1PB4 LINE L1 -3 6153 6037 606 270 162 51 chr10 67905854 67906077 -77683211 - HAL1 LINE L1 -1435 1072 875 321 324 92 17 chr10 67906416 67906589 -77682699 - MIR SINE MIR -59 203 18 41 0 0 0 chr10 67908602 67908643 -77680645 + AT_rich Low_complexity Low_complexity 1 41 0 1752 138 44 7 chr10 67908824 67909099 -77680189 + AluSq SINE Alu 7 291 -22 530 240 0 139 chr10 67909162 67909239 -77680049 - MER102b DNA MER1_type -1087 341 255 1159 228 104 19 chr10 67909239 67909555 -77679733 - MER2 DNA MER2_type -1 343 1 530 240 0 139 chr10 67909555 67909685 -77679603 - MER102b DNA MER1_type -1173 255 163 2327 88 0 13 chr10 67909696 67910004 -77679284 - AluSx SINE Alu -8 304 1 233 250 66 13 chr10 67911491 67911567 -77677721 - MLT1K LTR MaLR 0 588 509 411 308 19 0 chr10 67911987 67912094 -77677194 - MER5A DNA MER1_type -77 112 4 268 309 40 60 chr10 67912104 67912253 -77677035 + MLT1K LTR MaLR 8 153 -435 310 258 0 0 chr10 67912296 67912358 -77676930 + L2 LINE L2 3248 3309 -4 1893 155 0 0 chr10 67912394 67912701 -77676587 + AluJb SINE Alu 1 307 0 446 289 74 66 chr10 67912815 67912865 -77676423 + MLT1L LTR MaLR 370 418 -197 2292 99 0 3 chr10 67912865 67913168 -77676120 + AluSg1 SINE Alu 1 302 -7 2373 89 3 9 chr10 67913176 67913491 -77675797 + AluSq SINE Alu 1 313 0 446 289 74 66 chr10 67913491 67913673 -77675615 + MLT1L LTR MaLR 424 613 -2 210 326 29 117 chr10 67914377 67914797 -77674491 + L2 LINE L2 2811 3193 -79 509 313 25 12 chr10 67916936 67917099 -77672189 + MIR3 SINE MIR 30 194 -14 470 253 89 59 chr10 67917318 67917447 -77671841 - Charlie8 DNA MER1_type -65 276 135 2305 107 0 3 chr10 67917447 67917755 -77671533 - AluSx SINE Alu -5 307 1 470 253 89 59 chr10 67917755 67917862 -77671426 - Charlie8 DNA MER1_type -206 135 33 21 0 0 0 chr10 67918140 67918161 -77671127 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr10 67918216 67918238 -77671050 + AT_rich Low_complexity Low_complexity 1 22 0 2271 82 0 0 chr10 67918581 67918888 -77670400 + AluY SINE Alu 1 307 0 283 183 323 11 chr10 67919309 67919402 -77669886 + MER34 LTR ERV1 1 122 -420 * 1465 230 43 41 chr10 67919378 67919817 -77669471 + MER39 LTR ERV1 259 698 -9 492 263 80 80 chr10 67920102 67920441 -77668847 - MLT1I LTR MaLR 0 409 71 1537 171 0 82 chr10 67920701 67921017 -77668271 - AluJb SINE Alu -22 290 1 782 268 82 60 chr10 67921205 67921702 -77667586 + MLT1J LTR MaLR 3 510 -1 271 318 15 0 chr10 67922906 67922972 -77666316 - MIR SINE MIR -192 70 4 1593 233 110 30 chr10 67923820 67924322 -77664966 - MLT1F LTR MaLR 0 542 1 1064 177 101 5 chr10 67924617 67924712 -77664576 - AluJo SINE Alu -83 229 144 441 0 0 0 chr10 67924712 67924761 -77664527 + (TG)n Simple_repeat Simple_repeat 2 50 0 1064 177 101 5 chr10 67924761 67924874 -77664414 - AluJo SINE Alu -168 144 1 1848 162 14 3 chr10 67924905 67925201 -77664087 + AluJo SINE Alu 1 299 -13 2216 111 3 0 chr10 67926123 67926430 -77662858 + AluSx SINE Alu 1 308 -4 197 0 71 0 chr10 67926488 67926516 -77662772 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 305 68 0 0 chr10 67926532 67926576 -77662712 - L1M3 LINE L1 -813 5521 5478 499 240 29 10 chr10 67926721 67926825 -77662463 + MLT1A1 LTR MaLR 180 285 -80 992 313 35 6 chr10 67926831 67927170 -77662118 + L1M2 LINE L1 102 450 -6399 1429 201 0 43 chr10 67927640 67927943 -77661345 + L1PA15-16 LINE L1 444 733 -6116 5747 231 49 16 chr10 67928398 67930480 -77658808 + L1PA15-16 LINE L1 1429 3624 -3225 375 268 54 0 chr10 67930806 67930918 -77658370 - LTR33 LTR ERVL -57 464 347 241 217 155 62 chr10 67931033 67931162 -77658126 - LTR33 LTR ERVL -362 159 19 1744 171 3 16 chr10 67931210 67931519 -77657769 - AluY SINE Alu -4 307 3 1866 115 25 4 chr10 67931904 67932432 -77656856 - L1M1 LINE L1 -3993 3572 3000 934 212 14 5 chr10 67932534 67932746 -77656542 - L1PA6 LINE L1 -13 6141 5928 928 101 0 0 chr10 67933263 67933382 -77655906 + AluSg/x SINE Alu 177 295 -17 240 200 0 0 chr10 67933431 67933506 -77655782 + (TA)n Simple_repeat Simple_repeat 2 76 0 487 276 80 25 chr10 67934009 67934172 -77655116 - MIR3 SINE MIR -18 190 19 346 324 44 55 chr10 67934690 67934872 -77654416 - MIR3 SINE MIR -25 183 4 1030 217 16 16 chr10 67936258 67936502 -77652786 + MIR SINE MIR 14 257 -5 676 299 68 35 chr10 67936567 67936935 -77652353 + MLT1K LTR MaLR 152 531 -57 400 300 31 31 chr10 67937194 67937324 -77651964 + MIR3 SINE MIR 78 207 -1 2099 127 0 0 chr10 67937505 67937805 -77651483 - AluSx SINE Alu -12 300 1 1819 157 0 18 chr10 67938420 67938730 -77650558 + AluSx SINE Alu 1 305 0 2194 116 3 0 chr10 67939005 67939299 -77649989 + AluSx SINE Alu 1 295 -17 530 273 8 0 chr10 67939306 67939427 -77649861 - MIR SINE MIR -139 123 2 2527 129 5 27 chr10 67939772 67940144 -77649144 - THE1B LTR MaLR 0 364 1 12246 78 3 2 chr10 67940144 67941693 -77647595 - THE1B-int LTR MaLR 0 1580 31 294 29 0 0 chr10 67942075 67942110 -77647178 + (TG)n Simple_repeat Simple_repeat 2 36 0 465 90 0 0 chr10 67942111 67942178 -77647110 + (GA)n Simple_repeat Simple_repeat 2 68 0 2348 109 0 3 chr10 67942531 67942844 -77646444 - AluSx SINE Alu 0 312 1 1977 136 7 10 chr10 67942998 67943292 -77645996 - AluJb SINE Alu -19 293 1 2267 100 0 0 chr10 67943338 67943627 -77645661 + AluSc SINE Alu 1 289 -20 494 70 14 0 chr10 67943627 67943698 -77645590 + (GGAA)n Simple_repeat Simple_repeat 1 72 0 423 326 33 55 chr10 67943907 67944180 -77645108 - L1ME2 LINE L1 -220 5944 5678 216 0 0 0 chr10 67944183 67944207 -77645081 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 237 253 32 0 chr10 67944871 67944944 -77644344 + MIR SINE MIR 78 153 -55 243 62 0 0 chr10 67945156 67945188 -77644100 + MER69 DNA AcHobo 1 32 -2494 2291 107 3 3 chr10 67945358 67945667 -77643621 - AluSx SINE Alu -3 309 1 357 182 53 68 chr10 67945669 67945801 -77643487 + MER69 DNA AcHobo 2396 2525 -1 334 228 76 11 chr10 67945908 67946000 -77643288 + MIR3 SINE MIR 90 187 -21 24 0 0 0 chr10 67946041 67946065 -77643223 + AT_rich Low_complexity Low_complexity 1 24 0 2331 95 0 7 chr10 67946179 67946484 -77642804 - AluSg SINE Alu -7 303 1 464 257 62 7 chr10 67946917 67947061 -77642227 - MIR3 SINE MIR -2 206 55 1255 193 53 92 chr10 67947250 67947732 -77641556 + MER39 LTR ERV1 6 682 -25 232 200 0 14 chr10 67947872 67947942 -77641346 + L1ME3A LINE L1 4779 4847 -1299 329 280 107 13 chr10 67948110 67948260 -77641028 + L1ME3A LINE L1 5017 5180 -966 667 196 18 0 chr10 67948260 67948401 -77640887 + FLAM_A SINE Alu 1 143 0 318 280 21 0 chr10 67948424 67948517 -77640771 + L1ME2 LINE L1 6070 6164 0 928 288 53 29 chr10 67948631 67949234 -77640054 + L1ME3A LINE L1 5264 5883 -287 501 206 62 14 chr10 67949665 67949811 -77639477 - HAL1 LINE L1 -630 1877 1725 1001 272 31 70 chr10 67949821 67950106 -77639182 - HAL1 LINE L1 -1886 621 326 1595 182 55 7 chr10 67950106 67950282 -77639006 - AluJb SINE Alu -2 310 113 396 0 0 0 chr10 67950282 67950326 -77638962 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 1595 182 55 7 chr10 67950326 67950440 -77638848 - AluJb SINE Alu -199 113 6 1001 272 31 70 chr10 67950440 67950456 -77638832 - HAL1 LINE L1 -2181 326 311 2161 106 3 3 chr10 67950456 67950748 -77638540 - AluSx SINE Alu -18 294 3 1001 272 31 70 chr10 67950748 67950956 -77638332 - HAL1 LINE L1 -2196 311 131 232 281 21 31 chr10 67951072 67951168 -77638120 - HAL1 LINE L1 -2385 122 28 259 262 119 71 chr10 67951362 67951488 -77637800 - MIR3 SINE MIR -39 169 38 2231 122 0 10 chr10 67951617 67951929 -77637359 - AluSx SINE Alu -3 309 1 288 0 0 0 chr10 67952594 67952626 -77636662 + (CA)n Simple_repeat Simple_repeat 2 33 0 579 287 109 30 chr10 67953406 67953636 -77635652 - MIR SINE MIR 0 262 15 1147 223 49 67 chr10 67953852 67953974 -77635314 - L1ME1 LINE L1 -5 6161 6038 3099 67 20 2 chr10 67953974 67954379 -77634909 + L1PA7 LINE L1 5743 6154 0 1147 223 49 67 chr10 67954379 67954750 -77634538 - L1ME1 LINE L1 -128 6038 5677 729 219 30 2 chr10 67954778 67954978 -77634310 - L1ME1 LINE L1 -626 5536 5333 195 100 0 0 chr10 67955199 67955229 -77634059 + (AATTG)n Simple_repeat Simple_repeat 4 33 0 742 180 0 0 chr10 67955388 67955516 -77633772 - FLAM_C SINE Alu -5 128 1 2553 56 0 7 chr10 67956733 67957036 -77632252 + AluY SINE Alu 1 301 -10 2031 156 0 3 chr10 67957974 67958281 -77631007 - AluJb SINE Alu -6 306 1 1749 164 39 39 chr10 67958779 67959091 -77630197 + AluJb SINE Alu 1 312 0 957 233 0 0 chr10 67959215 67959404 -77629884 + MER5A DNA MER1_type 1 189 0 192 238 286 19 chr10 67959418 67959523 -77629765 - MIR SINE MIR -108 154 22 209 253 38 38 chr10 67959628 67959707 -77629581 + MIR SINE MIR 118 196 -66 1815 175 10 0 chr10 67960126 67960417 -77628871 - AluJb SINE Alu -18 294 1 864 258 122 41 chr10 67960547 67961155 -77628133 - L1ME4a LINE L1 -83 6038 5382 3588 172 122 3 chr10 67961239 67961977 -77627311 - LTR1B LTR ERV1 0 826 1 1271 217 49 41 chr10 67962024 67962369 -77626919 + LTR16C LTR ERVL 144 491 0 461 287 100 35 chr10 67963920 67964209 -77625079 - MLT1I LTR MaLR -2 407 100 463 275 16 85 chr10 67964627 67964756 -77624532 + MER5A DNA MER1_type 7 121 -68 2279 83 0 3 chr10 67964756 67965045 -77624243 - AluSg1 SINE Alu -21 288 1 463 275 16 85 chr10 67965045 67965104 -77624184 + MER5A DNA MER1_type 121 182 -7 2525 74 0 0 chr10 67966058 67966368 -77622920 + AluY SINE Alu 2 311 0 2003 222 52 90 chr10 67967899 67968167 -77621121 - L1MC5 LINE L1 -101 7860 7583 1922 164 3 14 chr10 67968167 67968460 -77620828 - AluJo SINE Alu -21 291 2 2003 222 52 90 chr10 67968460 67968596 -77620692 - L1MC5 LINE L1 -378 7583 7443 1051 161 0 12 chr10 67968596 67968764 -77620524 - FRAM SINE Alu 0 166 1 2003 222 52 90 chr10 67968764 67969368 -77619920 - L1MC5 LINE L1 -518 7443 6890 5494 69 22 5 chr10 67969368 67970122 -77619166 + LTR17 LTR ERV1 1 767 -13 207 167 0 0 chr10 67970126 67970162 -77619126 + C-rich Low_complexity Low_complexity 1 36 0 246 62 0 0 chr10 67970270 67970302 -77618986 + (TG)n Simple_repeat Simple_repeat 2 33 0 27 45 0 45 chr10 67970415 67970482 -77618806 + AT_rich Low_complexity Low_complexity 1 64 0 2034 135 6 22 chr10 67970542 67970853 -77618435 + AluSx SINE Alu 1 306 -6 1137 196 25 97 chr10 67970860 67971222 -77618066 - MLT2D LTR ERVL -78 336 1 1569 121 3 57 chr10 67971247 67971561 -77617727 - AluSx SINE Alu 0 312 16 212 268 82 62 chr10 67971838 67971935 -77617353 + L2 LINE L2 3169 3267 -46 1799 160 11 0 chr10 67971978 67972288 -77617000 + AluJb SINE Alu 1 313 0 594 133 0 50 chr10 67972318 67972438 -77616850 - MER51C LTR ERV1 -2 638 525 356 197 66 16 chr10 67972439 67972561 -77616727 - MER51A LTR ERV1 -37 597 470 266 202 32 128 chr10 67973428 67973493 -77615795 - MIR SINE MIR -54 208 153 2375 86 0 13 chr10 67973493 67973807 -77615481 - AluSq SINE Alu -3 310 1 266 202 32 128 chr10 67973807 67973835 -77615453 - MIR SINE MIR -109 153 124 1923 121 95 20 chr10 67974509 67974856 -77614432 + THE1C LTR MaLR 1 373 -2 652 161 110 0 chr10 67975226 67975344 -77613944 - FLAM_C SINE Alu 0 133 3 570 223 137 29 chr10 67975510 67975685 -77613603 - MIR SINE MIR -5 257 64 1902 121 37 0 chr10 67975778 67976083 -77613205 + AluSx SINE Alu 1 315 0 7499 29 9 0 chr10 67976274 67977549 -77611739 - L1PA4 LINE L1 -2 6153 4873 229 244 13 26 chr10 67977549 67977627 -77611661 + MER58B DNA MER1_type 77 153 -188 8679 182 27 8 chr10 67977640 67978191 -77611097 - L1PA16 LINE L1 -6 6160 5621 1796 199 3 3 chr10 67978191 67978502 -77610786 - AluJo SINE Alu -1 311 1 8679 182 27 8 chr10 67978502 67978616 -77610672 - L1PA16 LINE L1 -545 5621 5511 2309 98 0 3 chr10 67978616 67978912 -77610376 - AluSg1 SINE Alu -11 298 4 8679 182 27 8 chr10 67978912 67979777 -77609511 - L1PA16 LINE L1 -655 5511 4663 1873 149 48 7 chr10 67979777 67980072 -77609216 + AluSx SINE Alu 1 307 -5 8679 182 27 8 chr10 67980072 67981503 -77607785 - L1PA16 LINE L1 -1503 4663 3140 856 209 34 0 chr10 67981512 67981689 -77607599 + MER58B DNA MER1_type 159 341 0 2199 83 7 20 chr10 67982503 67982803 -77606485 + AluSx SINE Alu 1 296 -16 725 181 111 33 chr10 67982803 67983046 -77606242 - L1ME3A LINE L1 -8 6162 5901 267 208 0 75 chr10 67983141 67983261 -77606027 + CT-rich Low_complexity Low_complexity 3 113 0 27 0 0 0 chr10 67983283 67983310 -77605978 + AT_rich Low_complexity Low_complexity 1 27 0 6223 196 9 55 chr10 67983565 67984668 -77604620 + L1 LINE L1 3185 4186 -1960 2239 91 14 0 chr10 67984668 67984965 -77604323 - AluSq SINE Alu -12 301 1 6223 196 9 55 chr10 67984965 67985549 -77603739 + L1 LINE L1 4186 4795 -1351 2119 98 0 7 chr10 67985549 67985835 -77603453 + AluSx SINE Alu 1 284 -28 5090 140 30 6 chr10 67985839 67987213 -77602075 + L1PA16 LINE L1 4758 6151 -15 2042 106 22 0 chr10 67987268 67987565 -77601723 + AluSg1 SINE Alu 1 303 0 487 342 64 64 chr10 67987752 67988141 -77601147 - L1MC4a LINE L1 -1888 5920 5532 993 277 80 46 chr10 67988252 67988990 -77600298 - L1MC4a LINE L1 -749 5397 4622 1684 172 0 3 chr10 67988990 67989281 -77600007 + AluSg SINE Alu 3 292 -18 993 277 80 46 chr10 67989281 67989433 -77599855 - L1MC4a LINE L1 -1524 4622 4477 227 192 0 0 chr10 67989810 67989862 -77599426 + (TA)n Simple_repeat Simple_repeat 1 52 0 1631 187 16 29 chr10 67990862 67991038 -77598250 - AluJo SINE Alu 0 312 140 180 0 0 0 chr10 67991047 67991067 -77598221 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 2366 64 3 14 chr10 67991067 67991353 -77597935 - AluSp SINE Alu -23 290 6 1631 187 16 29 chr10 67991353 67991486 -77597802 - AluJo SINE Alu -172 140 7 209 381 98 58 chr10 67991493 67991666 -77597622 - L2 LINE L2 -18 3254 3075 511 313 58 31 chr10 67991811 67992102 -77597186 + L1MEd LINE L1 351 649 -5470 235 245 20 0 chr10 67992456 67992505 -77596783 + L2 LINE L2 3190 3239 -33 1719 189 58 52 chr10 67992510 67992892 -77596396 - MLT1B LTR MaLR -3 387 4 2663 141 33 21 chr10 67993120 67993547 -77595741 + MSTB1 LTR MaLR 1 432 0 1501 217 133 41 chr10 67993559 67994070 -77595218 + L1MA7 LINE L1 5452 6009 -282 12362 144 17 30 chr10 67994090 67995963 -77593325 + Ricksha_c DNA DNA 10 1856 -1398 2072 137 0 20 chr10 67995963 67996269 -77593019 - AluSq SINE Alu -13 300 1 12362 144 17 30 chr10 67996269 67996458 -77592830 + Ricksha_c DNA DNA 1856 2046 0 256 154 0 0 chr10 67996524 67996563 -77592725 - MSTA LTR MaLR 0 428 390 1080 153 10 20 chr10 67996563 67996759 -77592529 + AluJo SINE Alu 1 194 -118 226 288 0 12 chr10 67996811 67996891 -77592397 + T-rich Low_complexity Low_complexity 1 79 0 1033 145 21 16 chr10 67997302 67997488 -77591800 - L1M1 LINE L1 -7360 205 19 550 185 126 143 chr10 67997488 67997916 -77591372 - Charlie7 DNA MER1_type -763 1849 1429 7545 39 18 8 chr10 67997968 67998859 -77590429 + L1PA7 LINE L1 5254 6153 -1 28 0 0 0 chr10 67998859 67998887 -77590401 + AT_rich Low_complexity Low_complexity 1 28 0 394 259 54 0 chr10 67999307 67999419 -77589869 - LTR33 LTR ERVL -57 464 347 241 217 155 62 chr10 67999534 67999663 -77589625 - LTR33 LTR ERVL -362 159 19 2679 36 3 0 chr10 67999711 68000017 -77589271 - AluY SINE Alu -4 307 1 1466 200 154 6 chr10 68000646 68000991 -77588297 + MSTD LTR MaLR 1 396 0 458 139 0 0 chr10 68001687 68001759 -77587529 - MIR SINE MIR -118 144 73 1206 116 22 0 chr10 68001765 68001946 -77587342 - MER53 DNA DNA 0 189 5 300 296 138 21 chr10 68002084 68002273 -77587015 - MIR SINE MIR -40 222 12 1416 151 5 0 chr10 68002462 68002674 -77586614 - AluJb SINE Alu -99 213 1 328 148 0 0 chr10 68004035 68004089 -77585199 - MIR SINE MIR -5 257 204 240 185 94 14 chr10 68004396 68004466 -77584822 - MIR SINE MIR -77 131 56 2932 102 3 0 chr10 68004524 68004897 -77584391 - THE1C LTR MaLR 0 375 2 2225 113 0 3 chr10 68005651 68005953 -77583335 - AluSx SINE Alu -11 301 1 512 242 56 19 chr10 68006031 68006192 -77583096 + HAL1b LINE L1 1193 6121 0 3627 123 24 4 chr10 68006527 68007038 -77582250 - MER1A DNA MER1_type -6 523 3 3052 61 2 23 chr10 68007089 68007484 -77581804 + L1PA5 LINE L1 5768 6154 0 602 160 19 0 chr10 68007489 68007595 -77581693 + AluSg/x SINE Alu 205 312 0 1244 186 0 62 chr10 68007741 68008020 -77581268 - AluJb SINE Alu 0 303 41 289 320 74 65 chr10 68008116 68008441 -77580847 + MLT1K LTR MaLR 147 474 -114 1374 127 33 0 chr10 68008706 68008941 -77580347 - AluSg/x SINE Alu 0 306 65 192 77 0 0 chr10 68009090 68009116 -77580172 + (GGA)n Simple_repeat Simple_repeat 2 27 0 309 275 55 37 chr10 68009219 68009328 -77579960 + Charlie8 DNA MER1_type 7 117 -2300 254 213 0 0 chr10 68009350 68009397 -77579891 - MIR SINE MIR -37 225 179 693 294 108 0 chr10 68009402 68009606 -77579682 - MIR SINE MIR -10 252 27 233 241 36 12 chr10 68009960 68010043 -77579245 + L1MB4 LINE L1 5110 5194 -952 668 290 0 0 chr10 68010056 68010187 -77579101 + FAM SINE Alu 1 131 -54 559 98 0 0 chr10 68010186 68010268 -77579020 + FAM SINE Alu 101 182 -3 * 4714 166 36 13 chr10 68010271 68010343 -77578945 + L1MB4 LINE L1 5198 5267 -913 2416 80 0 3 chr10 68010343 68010644 -77578644 + AluY SINE Alu 1 300 -11 4714 166 36 13 chr10 68010644 68011527 -77577761 + L1MB4 LINE L1 5267 6174 -6 562 273 60 0 chr10 68012246 68012396 -77576892 + MIR3 SINE MIR 42 200 -8 213 221 59 44 chr10 68013571 68013639 -77575649 - L2 LINE L2 0 3313 3245 1630 163 7 35 chr10 68013679 68013968 -77575320 + AluJo SINE Alu 21 301 -11 1815 218 25 46 chr10 68015249 68015726 -77573562 - LTR37B LTR ERV1 0 468 2 1867 184 0 0 chr10 68016433 68016727 -77572561 + AluJb SINE Alu 1 294 -18 4202 160 40 15 chr10 68016951 68017694 -77571594 + L1MB5 LINE L1 5413 6174 0 559 210 98 24 chr10 68017994 68018160 -77571128 - MIR3 SINE MIR -7 201 21 5823 72 36 1 chr10 68018706 68019446 -77569842 - MER4E LTR ERV1 0 766 1 726 308 12 36 chr10 68019782 68020035 -77569253 + MIR SINE MIR 16 262 0 324 276 80 9 chr10 68020225 68020412 -77568876 - L3 LINE CR1 -74 1503 1249 2098 180 91 35 chr10 68020412 68020872 -77568416 + MER66B LTR ERV1 1 486 0 302 215 130 75 chr10 68021280 68021497 -77567791 - MIR SINE MIR -44 218 1 1302 184 28 0 chr10 68021619 68021837 -77567451 + MER58A DNA MER1_type 1 224 0 692 281 158 38 chr10 68023094 68023436 -77565852 - L3 LINE CR1 -26 1551 1169 410 258 68 23 chr10 68023468 68023600 -77565688 - LTR33 LTR ERVL 0 521 384 645 306 70 0 chr10 68023720 68023919 -77565369 - LTR33 LTR ERVL -308 213 1 1039 322 64 8 chr10 68023973 68024361 -77564927 + MLT1K LTR MaLR 69 478 -110 343 318 32 19 chr10 68024443 68024597 -77564691 + MIR SINE MIR 52 207 -55 314 262 48 39 chr10 68025634 68025737 -77563551 - L2 LINE L2 -27 3245 3142 673 346 107 28 chr10 68025927 68026662 -77562626 + L2 LINE L2 2470 3272 0 1046 192 18 41 chr10 68026839 68027058 -77562230 + AluJo SINE Alu 85 298 -14 504 228 121 11 chr10 68027258 68027441 -77561847 - MLT1J LTR MaLR -278 190 8 1277 184 137 26 chr10 68027444 68027715 -77561573 + AluJo SINE Alu 2 302 0 272 140 0 18 chr10 68027715 68027772 -77561516 + (GAGAA)n Simple_repeat Simple_repeat 1 56 0 1940 162 0 3 chr10 68028349 68028645 -77560643 - AluJo SINE Alu -17 295 1 2117 111 7 20 chr10 68029439 68029757 -77559531 - AluSx SINE Alu 0 312 1 618 252 56 88 chr10 68030128 68030378 -77558910 - MIR SINE MIR -19 243 2 283 321 55 18 chr10 68030386 68030495 -77558793 + MIR3 SINE MIR 3 115 -93 272 304 35 92 chr10 68030663 68030923 -77558365 - MIR SINE MIR 0 262 18 245 277 61 68 chr10 68030945 68031093 -77558195 + L1ME LINE L1 5576 5722 -399 192 245 41 0 chr10 68031433 68031482 -77557806 + L2 LINE L2 3019 3069 -203 520 171 44 171 chr10 68031520 68031642 -77557646 - L1MA4 LINE L1 -52 6248 6112 197 32 0 32 chr10 68031642 68031673 -77557615 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 520 171 44 171 chr10 68031673 68031693 -77557595 - L1MA4 LINE L1 -188 6112 6091 2183 106 3 0 chr10 68031693 68032002 -77557286 - AluSx SINE Alu 0 310 1 520 171 44 171 chr10 68032002 68032109 -77557179 - L1MA4 LINE L1 -209 6091 6029 206 268 82 62 chr10 68032192 68032289 -77556999 + L2 LINE L2 3169 3267 -46 1786 157 11 0 chr10 68032332 68032642 -77556646 + AluJo SINE Alu 1 313 0 620 137 0 57 chr10 68032672 68032796 -77556492 - MER51C LTR ERV1 -2 638 522 466 232 120 77 chr10 68032795 68033054 -77556234 - MER51A LTR ERV1 -37 597 328 * 260 202 32 128 chr10 68033783 68033848 -77555440 - MIR SINE MIR -54 208 153 2383 86 0 13 chr10 68033848 68034162 -77555126 - AluSq SINE Alu -3 310 1 260 202 32 128 chr10 68034162 68034190 -77555098 - MIR SINE MIR -109 153 124 180 0 0 0 chr10 68034625 68034645 -77554643 + (A)n Simple_repeat Simple_repeat 1 20 0 7222 168 8 5 chr10 68035060 68036355 -77552933 + L1PA13 LINE L1 3111 4409 -1737 5436 85 27 50 chr10 68036362 68036388 -77552900 + SVA Other Other 1 868 -520 5436 83 23 56 chr10 68036388 68037622 -77551666 + SVA Other Other 1 868 -520 1030 56 92 36 chr10 68037939 68038134 -77551154 + SVA Other Other 661 866 -520 6528 66 9 52 chr10 68038249 68039239 -77550049 + SVA Other Other 433 1379 -7 1512 178 51 69 chr10 68039241 68039252 -77550036 + L1MA2 LINE L1 3084 3094 -3052 5534 134 14 26 chr10 68039252 68040671 -77548617 + L1PA13 LINE L1 4398 5812 -351 2490 89 0 0 chr10 68040671 68040975 -77548313 + AluSg SINE Alu 1 304 -6 5534 134 14 26 chr10 68040975 68041323 -77547965 + L1PA13 LINE L1 5812 6163 0 1512 178 51 69 chr10 68041323 68041743 -77547545 + L1MA2 LINE L1 3094 3507 -2639 216 86 0 0 chr10 68041744 68041779 -77547509 + (TAAAA)n Simple_repeat Simple_repeat 1 35 0 9731 143 17 1 chr10 68041779 68044375 -77544913 + L1MA2 LINE L1 3676 6304 0 309 248 76 110 chr10 68045497 68045535 -77543753 + HAL1b LINE L1 765 803 -545 1092 155 0 12 chr10 68045535 68045703 -77543585 + FRAM SINE Alu 1 166 0 309 248 76 110 chr10 68045703 68045809 -77543479 + HAL1b LINE L1 803 904 -444 422 283 0 14 chr10 68046167 68046305 -77542983 + MLT1F LTR MaLR 1 136 -406 1911 125 32 4 chr10 68046305 68046607 -77542681 - AluJb SINE Alu 0 312 1 21 0 0 0 chr10 68046992 68047013 -77542275 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr10 68047068 68047090 -77542198 + AT_rich Low_complexity Low_complexity 1 22 0 2258 82 0 0 chr10 68047432 68047739 -77541549 + AluY SINE Alu 1 307 0 240 215 312 0 chr10 68048160 68048253 -77541035 + MER34 LTR ERV1 1 122 -420 * 1184 239 46 43 chr10 68048229 68048668 -77540620 + MER39 LTR ERV1 259 698 -9 382 298 62 62 chr10 68048953 68049292 -77539996 - MLT1I LTR MaLR 0 409 71 1565 171 0 82 chr10 68049552 68049868 -77539420 - AluJb SINE Alu -22 290 1 597 268 82 60 chr10 68050056 68050553 -77538735 + MLT1J LTR MaLR 3 510 -1 273 318 15 0 chr10 68051757 68051823 -77537465 - MIR SINE MIR -192 70 4 1389 231 116 36 chr10 68052671 68053173 -77536115 - MLT1F LTR MaLR 0 542 1 6013 80 2 0 chr10 68053958 68054761 -77534527 + THE1B-int LTR MaLR 776 1580 0 2351 129 5 27 chr10 68054761 68055133 -77534155 + THE1B LTR MaLR 1 364 0 523 273 8 0 chr10 68055478 68055599 -77533689 + MIR SINE MIR 2 123 -139 2135 113 3 3 chr10 68055606 68055899 -77533389 - AluSx SINE Alu -17 295 3 1923 121 95 20 chr10 68056604 68056951 -77532337 + THE1C LTR MaLR 1 373 -2 1759 98 0 0 chr10 68057429 68057654 -77531634 + AluSc SINE Alu 65 289 -20 494 70 14 0 chr10 68057654 68057725 -77531563 + (GGAA)n Simple_repeat Simple_repeat 1 72 0 419 327 33 52 chr10 68057934 68058206 -77531082 - L1ME2 LINE L1 -220 5944 5678 183 42 0 0 chr10 68058209 68058233 -77531055 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 428 231 37 8 chr10 68059901 68060035 -77529253 + MER2 DNA MER2_type 1 138 -207 14367 163 26 14 chr10 68060264 68064876 -77524412 + L1MA2 LINE L1 3056 7723 0 1259 267 34 18 chr10 68064889 68065395 -77523893 + Charlie7 DNA MER1_type 1839 2352 -260 1071 123 70 11 chr10 68065435 68065620 -77523668 - Tigger3(Golem) DNA MER2_type -682 2347 2152 5431 121 52 91 chr10 68065620 68065979 -77523309 + Tigger3b DNA MER2_type 3 374 -2654 2190 111 0 10 chr10 68065979 68066276 -77523012 - AluSx SINE Alu -18 294 1 5431 121 52 91 chr10 68066276 68066855 -77522433 + Tigger3b DNA MER2_type 374 884 -2144 2332 97 0 0 chr10 68066855 68067145 -77522143 - AluSg SINE Alu -20 290 1 5431 121 52 91 chr10 68067145 68067454 -77521834 + Tigger3b DNA MER2_type 884 1203 -28 208 147 27 0 chr10 68067921 68067963 -77521325 + MIR SINE MIR 100 144 -64 815 80 35 0 chr10 68067975 68068088 -77521200 - AluSg/x SINE Alu -17 293 177 227 293 243 21 chr10 68068771 68068911 -77520377 - MIR3 SINE MIR -5 203 33 1730 86 41 34 chr10 68069495 68069762 -77519526 - L1PA11 LINE L1 -3 6171 5903 423 302 58 6 chr10 68069949 68070121 -77519167 + MIR SINE MIR 67 247 -15 245 229 20 14 chr10 68070394 68070540 -77518748 - L1ME LINE L1 -286 5884 5704 323 246 251 5 chr10 68071098 68071301 -77517987 - L1ME4a LINE L1 -4 6117 5865 1493 236 71 54 chr10 68073579 68073973 -77515315 - MLT1F LTR MaLR 0 542 135 1872 123 30 4 chr10 68073973 68074264 -77515024 + AluJb SINE Alu 13 312 0 1493 236 71 54 chr10 68074264 68074402 -77514886 - MLT1F LTR MaLR -407 135 1 309 248 76 110 chr10 68074760 68074866 -77514422 - HAL1b LINE L1 -444 904 803 1092 155 0 12 chr10 68074866 68075034 -77514254 - FRAM SINE Alu 0 166 1 309 248 76 110 chr10 68075034 68075072 -77514216 - HAL1b LINE L1 -545 803 765 8956 175 33 2 chr10 68075619 68078215 -77511073 - L1MA2 LINE L1 0 6304 3521 216 86 0 0 chr10 68078215 68078250 -77511038 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 8956 175 33 2 chr10 68078250 68078657 -77510631 - L1MA2 LINE L1 -2783 3521 3128 17651 178 9 20 chr10 68078676 68079024 -77510264 - L1PA13 LINE L1 0 7601 7251 2488 89 0 0 chr10 68079024 68079328 -77509960 - AluSg SINE Alu -6 304 1 17651 178 9 20 chr10 68079328 68080755 -77508533 - L1PA13 LINE L1 -350 7251 5809 9773 28 2 204 chr10 68080755 68082489 -77506799 - SVA Other Other 0 1386 4 17651 178 9 20 chr10 68082489 68085421 -77503867 - L1PA13 LINE L1 -1792 5809 2948 4040 223 39 17 chr10 68085418 68086341 -77502947 - L1PA13 LINE L1 -6633 948 6 * 3626 203 35 11 chr10 68086347 68087238 -77502050 - L1MA2 LINE L1 -3014 3132 2221 2009 166 0 0 chr10 68087276 68087571 -77501717 - AluSx SINE Alu -17 295 1 586 253 190 30 chr10 68087704 68088198 -77501090 - HAL1 LINE L1 -822 1685 1113 540 213 0 0 chr10 68088219 68088327 -77500961 - L1PB4 LINE L1 -12 6144 6037 315 345 50 20 chr10 68088373 68088573 -77500715 - HAL1 LINE L1 -1450 1057 852 334 324 92 17 chr10 68088888 68089061 -77500227 - MIR SINE MIR -59 203 18 41 0 0 0 chr10 68091076 68091117 -77498171 + AT_rich Low_complexity Low_complexity 1 41 0 1936 130 42 7 chr10 68091298 68091582 -77497706 + AluSx SINE Alu 7 300 -12 435 239 44 0 chr10 68092854 68092967 -77496321 - MER103 DNA DNA -47 119 2 5805 152 72 9 chr10 68093196 68094375 -77494913 + L1MA9 LINE L1 4507 5832 -480 387 0 0 0 chr10 68094375 68094418 -77494870 + (CA)n Simple_repeat Simple_repeat 2 44 0 5805 152 72 9 chr10 68094418 68094918 -77494370 + L1MA9 LINE L1 5832 6299 -13 324 143 0 0 chr10 68095168 68095224 -77494064 + (GA)n Simple_repeat Simple_repeat 1 56 0 346 229 81 47 chr10 68095247 68095399 -77493889 + MLT1J2 LTR MaLR 303 409 0 494 300 172 0 chr10 68095452 68095632 -77493656 - MIR SINE MIR -3 259 49 2216 126 0 0 chr10 68096060 68096362 -77492926 + AluSx SINE Alu 1 302 -10 210 118 0 0 chr10 68096560 68096594 -77492694 + (TTAA)n Simple_repeat Simple_repeat 1 34 0 1189 233 89 143 chr10 68096688 68096981 -77492307 + L1MC4 LINE L1 6815 7122 -920 2342 115 32 29 chr10 68096981 68097355 -77491933 - THE1C LTR MaLR 0 375 1 1189 233 89 143 chr10 68097355 68098233 -77491055 + L1MC4 LINE L1 7122 7920 -122 474 18 0 0 chr10 68098233 68098288 -77491000 + (TA)n Simple_repeat Simple_repeat 2 56 0 1189 233 89 143 chr10 68098288 68098336 -77490952 + L1MC4 LINE L1 7920 7969 -73 29 21 0 21 chr10 68098346 68098374 -77490914 + AT_rich Low_complexity Low_complexity 1 29 -17 2267 125 0 0 chr10 68098374 68098686 -77490602 - AluSx SINE Alu 0 312 1 29 21 0 21 chr10 68098686 68098704 -77490584 + AT_rich Low_complexity Low_complexity 29 46 0 797 250 64 0 chr10 68098799 68099003 -77490285 + MIR SINE MIR 46 262 0 2482 170 14 23 chr10 68099447 68099883 -77489405 - MSTB1 LTR MaLR 0 432 1 227 240 0 0 chr10 68100488 68100538 -77488750 + MIR SINE MIR 82 131 -131 2084 133 0 0 chr10 68100553 68100879 -77488409 + AluSx SINE Alu 1 312 0 206 278 14 14 chr10 68101280 68101352 -77487936 + (TCTCTG)n Simple_repeat Simple_repeat 6 77 0 547 265 60 113 chr10 68101857 68102257 -77487031 + MLT1J LTR MaLR 14 392 -119 628 179 14 62 chr10 68102257 68102402 -77486886 - MER31B LTR ERV1 0 466 329 822 176 8 0 chr10 68102402 68102533 -77486755 + AluJb SINE Alu 1 132 -180 994 146 24 40 chr10 68102538 68102848 -77486440 - MER31B LTR ERV1 -125 341 1 24 67 0 0 chr10 68103183 68103228 -77486060 + AT_rich Low_complexity Low_complexity 1 45 0 414 329 182 20 chr10 68103421 68104014 -77485274 + L2 LINE L2 1365 2053 -1261 824 263 41 23 chr10 68104341 68104764 -77484524 + MER90 LTR ERV1 37 603 -11 1752 98 0 0 chr10 68104952 68105176 -77484112 - AluSg/x SINE Alu 0 310 87 607 80 0 0 chr10 68105176 68105251 -77484037 + AluS SINE Alu 13 87 -225 2106 128 3 0 chr10 68105726 68106022 -77483266 - AluSg SINE Alu -10 300 4 252 0 0 0 chr10 68106024 68106052 -77483236 + (T)n Simple_repeat Simple_repeat 1 28 0 291 157 0 0 chr10 68106598 68106649 -77482639 + (CA)n Simple_repeat Simple_repeat 1 51 0 301 260 77 19 chr10 68107059 68107163 -77482125 + L2 LINE L2 3202 3311 -2 22 0 0 0 chr10 68108077 68108099 -77481189 + AT_rich Low_complexity Low_complexity 1 22 0 1573 155 18 122 chr10 68108282 68108452 -77480836 - AluJo SINE Alu 0 302 116 219 103 0 0 chr10 68108452 68108491 -77480797 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 2275 62 0 4 chr10 68108491 68108763 -77480525 - AluY SINE Alu -28 283 13 1573 155 18 122 chr10 68108763 68108926 -77480362 - AluJo SINE Alu -184 118 3 348 235 62 3 chr10 68109266 68109383 -77479905 + LTR33A LTR ERVL 419 523 0 2469 127 34 8 chr10 68109734 68110089 -77479199 + THE1B LTR MaLR 1 364 0 709 299 118 18 chr10 68110732 68111070 -77478218 - L2 LINE L2 -3 3310 2939 237 33 0 0 chr10 68112667 68112697 -77476591 + (TC)n Simple_repeat Simple_repeat 1 30 0 230 359 24 75 chr10 68112704 68112999 -77476289 - L2 LINE L2 -71 3201 2922 1591 238 32 0 chr10 68113211 68113552 -77475736 + LTR16B LTR ERVL 1 352 -112 345 356 17 17 chr10 68113595 68113775 -77475513 + HERV16 LTR ERVL 4809 4988 -8 1596 259 45 18 chr10 68113786 68114187 -77475101 + LTR16B LTR ERVL 3 419 -45 3012 164 47 29 chr10 68114187 68114698 -77474590 + MLT2B1 LTR ERVL 1 520 0 1596 259 45 18 chr10 68114698 68114744 -77474544 + LTR16B LTR ERVL 419 462 -2 458 326 94 20 chr10 68114797 68114925 -77474363 - L2 LINE L2 -468 2846 2729 2114 126 0 3 chr10 68114925 68115241 -77474047 - AluSq SINE Alu 0 313 1 458 326 94 20 chr10 68115241 68115357 -77473931 - L2 LINE L2 -585 2729 2584 29 28 0 0 chr10 68115506 68115542 -77473746 + AT_rich Low_complexity Low_complexity 1 36 0 824 231 47 6 chr10 68115920 68116089 -77473199 + MER45A DNA AcHobo 1 176 -2 417 268 141 0 chr10 68116092 68116234 -77473054 - MIR SINE MIR -93 169 8 185 205 26 0 chr10 68116527 68116566 -77472722 - MER5B DNA MER1_type 0 178 139 335 329 43 19 chr10 68116665 68116826 -77472462 - L3 LINE CR1 -1350 227 63 2991 174 38 34 chr10 68116829 68117409 -77471879 + L1M1 LINE L1 13 595 -6966 4107 86 4 4 chr10 68117409 68117920 -77471368 + MER9 LTR ERVK 1 511 0 23133 61 0 1 chr10 68117924 68120709 -77468579 + HERVK9 LTR ERVK 5 2786 -3130 7526 68 7 8 chr10 68120709 68121662 -77467626 + HERVK9 LTR ERVK 3711 4662 -1254 42767 61 2 1 chr10 68121671 68127824 -77461464 - L1PA5 LINE L1 0 6154 1 2693 117 19 0 chr10 68129541 68129909 -77459379 - THE1C LTR MaLR 0 375 1 619 316 25 29 chr10 68129975 68130219 -77459069 + MIR SINE MIR 1 243 -19 390 42 0 0 chr10 68131074 68131122 -77458166 + (TG)n Simple_repeat Simple_repeat 2 49 0 201 147 0 0 chr10 68131805 68131839 -77457449 + (TG)n Simple_repeat Simple_repeat 1 34 0 698 179 133 83 chr10 68132602 68132820 -77456468 + MER106A DNA MER1_type 8 236 0 207 234 19 140 chr10 68132849 68132956 -77456332 - MIR SINE MIR -78 130 37 * 214 288 91 0 chr10 68132928 68132994 -77456294 + MIR SINE MIR 50 121 -141 1250 199 142 24 chr10 68132994 68133326 -77455962 - L1ME1 LINE L1 -138 6028 5658 2262 105 7 0 chr10 68133331 68133627 -77455661 - AluSx SINE Alu -14 298 1 388 280 66 80 chr10 68134111 68134400 -77454888 - L2 LINE L2 -797 2517 2233 701 321 60 29 chr10 68134919 68135302 -77453986 + LTR16C LTR ERVL 97 491 0 373 274 122 37 chr10 68135722 68135886 -77453402 + MER5B DNA MER1_type 1 178 0 181 217 217 11 chr10 68137031 68137123 -77452165 - MIR SINE MIR -28 234 124 772 245 46 17 chr10 68137842 68138074 -77451214 - MIR SINE MIR -12 250 1 243 331 80 53 chr10 68139098 68139249 -77450039 - L2 LINE L2 -10 3262 3108 263 356 158 20 chr10 68139373 68139575 -77449713 - L2 LINE L2 0 3272 3043 227 299 79 68 chr10 68139528 68139705 -77449583 + MER91A DNA MER1_type 18 196 0 * 3505 198 37 48 chr10 68139718 68140576 -77448712 - L1ME1 LINE L1 0 6166 5318 783 136 8 0 chr10 68140620 68140738 -77448550 - FRAM SINE Alu -11 165 47 1817 196 72 39 chr10 68140738 68140883 -77448405 - L1ME1 LINE L1 -863 5283 5144 2313 104 0 0 chr10 68140883 68141180 -77448108 - AluSx SINE Alu -1 311 15 1817 196 72 39 chr10 68141180 68141519 -77447769 - L1ME1 LINE L1 -1002 5144 4783 1709 50 0 66 chr10 68141813 68142116 -77447172 + AluY SINE Alu 1 283 -28 218 306 19 19 chr10 68142624 68142781 -77446507 + CT-rich Low_complexity Low_complexity 3 159 0 * 339 276 41 24 chr10 68142704 68142874 -77446414 + C-rich Low_complexity Low_complexity 4 176 0 3366 148 13 19 chr10 68143005 68143825 -77445463 - L1P5 LINE L1 -407 5744 4929 330 304 36 18 chr10 68144218 68144330 -77444958 - MER91B DNA MER1_type -67 123 10 2075 116 48 0 chr10 68144436 68144730 -77444558 + AluSx SINE Alu 1 308 -4 1081 114 12 18 chr10 68145424 68145590 -77443698 + AluSg/x SINE Alu 120 284 -26 420 304 12 12 chr10 68145966 68146134 -77443154 + C-rich Low_complexity Low_complexity 1 168 0 198 219 0 0 chr10 68146150 68146214 -77443074 + C-rich Low_complexity Low_complexity 1 64 0 350 243 29 22 chr10 68146220 68146356 -77442932 + (CCCCG)n Simple_repeat Simple_repeat 1 137 0 28 29 0 0 chr10 68146389 68146424 -77442864 + GC_rich Low_complexity Low_complexity 1 35 0 10008 34 9 0 chr10 68146645 68147866 -77441422 + L1P LINE L1 1912 3143 -3003 2312 220 29 77 chr10 68148002 68149010 -77440278 + L1P LINE L1 2278 3236 -2910 1710 128 0 16 chr10 68149012 68149270 -77440018 - THE1C LTR MaLR 0 375 122 235 318 39 0 chr10 68149656 68149785 -77439503 + MLT1K LTR MaLR 126 259 -329 297 311 42 0 chr10 68150775 68150894 -77438394 - L2 LINE L2 -589 2725 2602 3234 138 15 51 chr10 68150931 68151541 -77437747 + L1PA16 LINE L1 5570 6157 -9 1663 176 0 8 chr10 68151690 68151957 -77437331 + AluJb SINE Alu 1 265 -47 1080 282 190 10 chr10 68152166 68152729 -77436559 + L1ME3A LINE L1 5293 5951 -219 518 249 35 56 chr10 68153549 68153746 -77435542 - MER117 DNA MER1_type -1 196 4 4272 209 29 12 chr10 68154505 68155483 -77433805 - L1P LINE L1 -1008 5138 4145 1470 230 62 0 chr10 68155797 68156101 -77433187 + L1MA9 LINE L1 1532 1854 -5632 * 11338 212 42 43 chr10 68156097 68159737 -77429551 + L1MA9 LINE L1 2814 6457 -1274 2260 107 0 3 chr10 68159737 68160036 -77429252 - AluSq SINE Alu -15 298 1 11338 212 42 43 chr10 68160036 68160826 -77428462 + L1MA9 LINE L1 6457 7069 -662 2250 166 12 0 chr10 68160826 68161170 -77428118 - MER7A DNA MER2_type 0 346 1 11338 212 42 43 chr10 68161170 68161499 -77427789 + L1MA9 LINE L1 7069 7397 -334 5505 85 15 4 chr10 68161495 68162246 -77427042 + L1PA14 LINE L1 5403 6161 0 * 1692 158 48 40 chr10 68162217 68162596 -77426692 + L1MA9 LINE L1 5931 6312 0 * 315 297 16 23 chr10 68162921 68163049 -77426239 - MER5B DNA MER1_type -51 127 1 2276 181 33 15 chr10 68163067 68163525 -77425763 - L1MB7 LINE L1 -9 6175 5710 193 216 54 40 chr10 68163631 68163705 -77425583 - L3 LINE CR1 -434 1143 1069 484 276 114 59 chr10 68164088 68164264 -77425024 - MIR SINE MIR -3 259 64 2928 59 35 0 chr10 68164264 68164605 -77424683 + THE1A LTR MaLR 1 353 -2 484 276 114 59 chr10 68164605 68164657 -77424631 - MIR SINE MIR -198 64 16 369 286 50 8 chr10 68164689 68164808 -77424480 - L2 LINE L2 -6 3307 3184 1822 136 11 7 chr10 68166744 68167031 -77422257 + AluSx SINE Alu 25 312 0 394 351 27 18 chr10 68167197 68167419 -77421869 - MIR SINE MIR -11 251 28 282 319 104 7 chr10 68167504 68167639 -77421649 + MIR SINE MIR 81 228 -34 648 297 74 7 chr10 68168166 68168435 -77420853 - L1MC4a LINE L1 -1827 5981 5695 344 207 129 93 chr10 68168496 68168676 -77420612 - MER20B DNA MER1_type -3 216 28 1543 201 49 57 chr10 68168758 68169126 -77420162 + MLT1A1 LTR MaLR 1 365 0 263 256 64 0 chr10 68169515 68169593 -77419695 - MIR3 SINE MIR 0 208 126 340 265 42 96 chr10 68169725 68169851 -77419437 + MER5A DNA MER1_type 1 126 -61 1970 79 0 43 chr10 68169851 68170131 -77419157 - AluY SINE Alu -15 296 29 340 265 42 96 chr10 68170131 68170170 -77419118 + MER5A DNA MER1_type 126 166 -21 231 36 0 0 chr10 68170440 68170468 -77418820 + (A)n Simple_repeat Simple_repeat 1 28 0 259 253 190 68 chr10 68170960 68171344 -77417944 + LTR33 LTR ERVL 19 449 -72 347 211 56 11 chr10 68171957 68172047 -77417241 - L1ME LINE L1 -341 5780 5687 1881 264 71 8 chr10 68172094 68172881 -77416407 - L2 LINE L2 -56 3257 2421 1100 207 14 18 chr10 68172902 68173119 -77416169 + MER20 DNA MER1_type 1 216 -3 2855 138 58 2 chr10 68174387 68174850 -77414438 - L1MB8 LINE L1 -6 6172 5684 195 196 0 22 chr10 68174875 68174921 -77414367 + L2 LINE L2 3015 3059 -213 279 234 13 13 chr10 68175934 68176011 -77413277 + L2 LINE L2 3189 3265 -7 338 207 13 33 chr10 68177927 68178077 -77411211 + CT-rich Low_complexity Low_complexity 2 148 0 195 341 24 0 chr10 68179453 68179535 -77409753 - MIR SINE MIR -27 235 152 251 234 65 103 chr10 68179918 68180025 -77409263 + MER102b DNA MER1_type 228 330 -11 387 158 13 0 chr10 68180025 68180101 -77409187 + MIR SINE MIR 174 250 -12 1514 215 12 12 chr10 68180334 68180660 -77408628 + MER58B DNA MER1_type 7 332 -9 895 274 132 16 chr10 68180955 68181327 -77407961 + LTR33 LTR ERVL 3 417 -104 299 252 235 8 chr10 68181360 68181479 -77407809 + MIR SINE MIR 114 259 -3 272 346 98 29 chr10 68181540 68181887 -77407401 - L2 LINE L2 -724 2590 2220 332 287 17 94 chr10 68181943 68181999 -77407289 + MIR3 SINE MIR 2 61 -147 1715 157 13 31 chr10 68181999 68182317 -77406971 - AluJo SINE Alu 0 312 1 332 287 17 94 chr10 68182317 68182441 -77406847 + MIR3 SINE MIR 61 168 -40 757 252 90 26 chr10 68182635 68182869 -77406419 - MIR SINE MIR 0 262 14 789 215 65 29 chr10 68184206 68184458 -77404830 + MIR SINE MIR 5 261 -1 194 283 10 91 chr10 68184641 68184740 -77404548 + L2 LINE L2 3178 3268 -4 397 285 56 40 chr10 68184869 68185051 -77404237 - MIR SINE MIR -43 219 36 702 256 55 81 chr10 68185159 68185507 -77403781 - MER102b DNA MER1_type -1 340 2 22 35 0 0 chr10 68186237 68186266 -77403022 + AT_rich Low_complexity Low_complexity 1 29 0 1089 228 79 58 chr10 68187480 68187532 -77401756 + L1MC5 LINE L1 7452 7501 -460 216 0 0 0 chr10 68187532 68187556 -77401732 + (GA)n Simple_repeat Simple_repeat 1 24 0 1089 228 79 58 chr10 68187556 68187688 -77401600 + L1MC5 LINE L1 7501 7629 -332 189 0 0 0 chr10 68187688 68187709 -77401579 + (TTA)n Simple_repeat Simple_repeat 2 22 0 1763 164 0 18 chr10 68187711 68187997 -77401291 - AluJo SINE Alu -31 281 1 1089 228 79 58 chr10 68187997 68188133 -77401155 + L1MC5 LINE L1 7629 7761 -200 1553 215 135 5 chr10 68188133 68188519 -77400769 - MER63B DNA MER1_type 0 436 1 1089 228 79 58 chr10 68188519 68188675 -77400613 + L1MC5 LINE L1 7761 7943 -18 231 330 17 26 chr10 68188752 68188867 -77400421 + MIR SINE MIR 20 133 -75 678 261 35 58 chr10 68189142 68189167 -77400121 + MIR SINE MIR 8 32 -230 2635 138 8 70 chr10 68189167 68189552 -77399736 + L1MB8 LINE L1 5722 6072 -106 2300 93 0 7 chr10 68189552 68189852 -77399436 + AluSx SINE Alu 1 298 -14 2635 138 8 70 chr10 68189852 68189953 -77399335 + L1MB8 LINE L1 6072 6178 0 678 261 35 58 chr10 68189953 68190187 -77399101 + MIR SINE MIR 32 261 -1 284 39 0 78 chr10 68190245 68190270 -77399018 + (T)n Simple_repeat Simple_repeat 1 22 -25 1612 111 9 4 chr10 68190270 68190495 -77398793 - AluSp SINE Alu -87 226 1 284 39 0 78 chr10 68190495 68190520 -77398768 + (T)n Simple_repeat Simple_repeat 22 47 0 951 210 162 34 chr10 68190596 68190924 -77398364 + MLT1D LTR MaLR 16 385 -120 22 35 0 0 chr10 68190961 68190990 -77398298 + AT_rich Low_complexity Low_complexity 1 29 0 277 194 14 42 chr10 68190990 68191062 -77398226 - L1MA9 LINE L1 -38 6274 6205 204 40 0 0 chr10 68192648 68192673 -77396615 + (CA)n Simple_repeat Simple_repeat 1 25 0 772 180 37 6 chr10 68192878 68193039 -77396249 + MER20 DNA MER1_type 39 204 -15 789 188 48 6 chr10 68193161 68193326 -77395962 - MER20 DNA MER1_type -19 200 29 230 301 14 0 chr10 68193479 68193552 -77395736 - MIR SINE MIR -5 257 184 292 293 12 0 chr10 68193585 68193667 -77395621 + (CATA)n Simple_repeat Simple_repeat 2 84 0 429 92 15 0 chr10 68194044 68194109 -77395179 + MER34B LTR ERV1 308 373 -192 3541 111 35 4 chr10 68194203 68194716 -77394572 - MER34B LTR ERV1 -29 536 8 461 280 113 42 chr10 68195665 68195904 -77393384 - MIR SINE MIR -5 257 2 528 247 176 22 chr10 68196124 68196306 -77392982 + MLT1F1 LTR MaLR 1 210 -332 931 227 199 0 chr10 68196360 68196611 -77392677 + MLT1F1 LTR MaLR 181 481 -86 312 250 70 101 chr10 68196955 68197150 -77392138 + MIR3 SINE MIR 5 222 -40 457 264 16 8 chr10 68197342 68197467 -77391821 - L2 LINE L2 0 3313 3188 1391 178 58 19 chr10 68197758 68198067 -77391221 + L1MA9 LINE L1 5991 6311 -1 202 306 125 36 chr10 68198186 68198434 -77390854 - L2 LINE L2 -421 2893 2624 756 219 44 25 chr10 68198456 68198785 -77390503 + MLT1B LTR MaLR 1 390 0 402 315 6 44 chr10 68198833 68199014 -77390274 + MER5B DNA MER1_type 2 175 -3 322 185 87 22 chr10 68199295 68199387 -77389901 + MIR SINE MIR 46 143 -119 2221 115 48 48 chr10 68199406 68199781 -77389507 + THE1C LTR MaLR 1 375 0 293 259 65 37 chr10 68200678 68200786 -77388502 + L2 LINE L2 3150 3260 -12 231 203 0 0 chr10 68201801 68201860 -77387428 + (CCA)n Simple_repeat Simple_repeat 3 61 0 521 299 23 42 chr10 68201860 68202121 -77387167 - MIR SINE MIR -2 260 5 1017 286 78 29 chr10 68203266 68203651 -77385637 - MLT1I LTR MaLR 0 409 6 789 202 85 81 chr10 68204132 68204380 -77384908 - MIR SINE MIR -2 260 12 1070 189 38 47 chr10 68204866 68205078 -77384210 + MER63A DNA MER1_type 1 210 0 180 0 0 0 chr10 68205121 68205141 -77384147 + (A)n Simple_repeat Simple_repeat 1 20 0 199 301 86 0 chr10 68205312 68205405 -77383883 + MIR3 SINE MIR 6 106 -102 22 35 0 0 chr10 68205699 68205728 -77383560 + AT_rich Low_complexity Low_complexity 1 29 0 463 299 64 29 chr10 68205761 68205965 -77383323 - MIR SINE MIR -50 212 2 222 118 0 0 chr10 68206329 68206363 -77382925 + (GGGAGA)n Simple_repeat Simple_repeat 3 36 0 457 284 106 24 chr10 68207057 68207265 -77382023 + MIR SINE MIR 22 246 -16 196 236 69 69 chr10 68207512 68207584 -77381704 + MIR SINE MIR 63 134 -74 2256 102 7 0 chr10 68207584 68207879 -77381409 - AluSq SINE Alu -16 297 1 218 179 0 125 chr10 68208733 68208789 -77380499 - L2 LINE L2 -195 3077 3029 336 228 139 0 chr10 68208932 68209011 -77380277 - MLT1E1 LTR MaLR -505 149 60 28 0 0 0 chr10 68209829 68209857 -77379431 + AT_rich Low_complexity Low_complexity 1 28 0 2354 84 0 0 chr10 68209875 68210174 -77379114 - AluY SINE Alu -12 299 1 992 207 162 6 chr10 68210449 68210483 -77378805 - MLT2B1 LTR ERVL -2 552 525 387 41 0 0 chr10 68210483 68210532 -77378756 + (TG)n Simple_repeat Simple_repeat 2 50 0 992 207 162 6 chr10 68210532 68210779 -77378509 - MLT2B1 LTR ERVL -29 525 166 5684 145 16 18 chr10 68210872 68211851 -77377437 - L1MA5 LINE L1 -2 6298 5322 397 105 18 0 chr10 68211852 68211909 -77377379 - MER4E LTR ERV1 -26 753 696 1604 229 13 11 chr10 68211915 68212291 -77376997 - L1M2 LINE L1 -5113 2096 1720 764 269 116 57 chr10 68212317 68212884 -77376404 - L1M2 LINE L1 -6335 874 1 470 238 81 43 chr10 68212893 68213103 -77376185 + L1MC5 LINE L1 7708 7925 -36 299 279 43 37 chr10 68215430 68215617 -77373671 + LTR67 LTR ERVL 346 515 -8 22 0 0 0 chr10 68215879 68215901 -77373387 + AT_rich Low_complexity Low_complexity 1 22 0 812 212 76 0 chr10 68216708 68216892 -77372396 - MIR SINE MIR -60 202 5 688 308 49 0 chr10 68216949 68217134 -77372154 + MER91A DNA MER1_type 1 194 -2 331 365 72 31 chr10 68217698 68218094 -77371194 + L2 LINE L2 2615 3042 -230 246 373 24 24 chr10 68218331 68218457 -77370831 + L2 LINE L2 3136 3261 -11 203 152 0 0 chr10 68219181 68219214 -77370074 + (CAT)n Simple_repeat Simple_repeat 2 34 0 275 309 0 12 chr10 68219307 68219391 -77369897 - MIR SINE MIR -63 145 63 552 218 35 104 chr10 68219662 68219864 -77369424 + MER91B DNA MER1_type 3 190 0 291 268 109 43 chr10 68219868 68220006 -77369282 - MLT1K LTR MaLR -246 342 196 1416 185 44 105 chr10 68220200 68220589 -77368699 + MLT1A1 LTR MaLR 1 365 0 1514 192 0 0 chr10 68220811 68221082 -77368206 - AluJb SINE Alu -8 304 34 22 0 0 0 chr10 68221942 68221964 -77367324 + AT_rich Low_complexity Low_complexity 1 22 0 265 277 142 71 chr10 68222172 68222511 -77366777 - MLT1K LTR MaLR -2 586 224 268 289 157 13 chr10 68223625 68223784 -77365504 - L2 LINE L2 -15 3298 3117 439 280 77 33 chr10 68223852 68224034 -77365254 + MIR SINE MIR 17 206 -56 5349 65 20 17 chr10 68225344 68226002 -77363286 - PABL_A LTR ERV1 0 660 1 1639 159 14 24 chr10 68226536 68226831 -77362457 + AluJb SINE Alu 3 294 -18 632 293 148 15 chr10 68227039 68227370 -77361918 + L3 LINE CR1 1190 1564 -13 631 249 34 82 chr10 68227731 68227964 -77361324 - L1ME3A LINE L1 -27 6143 5922 * 633 241 50 91 chr10 68227954 68228017 -77361271 - L1ME3A LINE L1 -609 5553 5489 893 128 0 8 chr10 68228017 68228142 -77361146 - FLAM_C SINE Alu -9 124 1 633 241 50 91 chr10 68228142 68228520 -77360768 - L1ME3A LINE L1 -673 5489 5107 * 42762 47 2 2 chr10 68228499 68234511 -77354777 - L1PA4 LINE L1 0 6155 144 4427 167 24 36 chr10 68234665 68235556 -77353732 + MER11C LTR ERVK 192 1071 0 1290 92 82 38 chr10 68235556 68235796 -77353492 + L1PA10 LINE L1 5161 5406 -750 243 0 0 0 chr10 68235950 68235977 -77353311 + (T)n Simple_repeat Simple_repeat 1 27 0 30 0 0 0 chr10 68235991 68236021 -77353267 + GC_rich Low_complexity Low_complexity 1 30 0 238 156 0 0 chr10 68236031 68236063 -77353225 + A-rich Low_complexity Low_complexity 1 32 0 228 35 0 0 chr10 68236080 68236109 -77353179 + (T)n Simple_repeat Simple_repeat 1 29 0 3352 100 2 5 chr10 68236110 68236674 -77352614 + L1PA10 LINE L1 5456 6155 -13 993 176 0 24 chr10 68237641 68237811 -77351477 - FRAM SINE Alu 0 166 1 12263 75 1 1 chr10 68237954 68239543 -77349745 - L1P LINE L1 -4536 1610 22 1446 284 131 22 chr10 68239556 68240494 -77348794 - L1M4 LINE L1 -993 5153 4114 665 137 0 0 chr10 68240828 68240923 -77348365 - MLT2B3 LTR ERVL -94 460 366 209 281 0 67 chr10 68241967 68242056 -77347232 + MIR SINE MIR 106 188 -74 11827 130 48 33 chr10 68242224 68243166 -77346122 - Tigger1 DNA MER2_type 0 2418 1492 1986 133 3 0 chr10 68243166 68243452 -77345836 + AluSx SINE Alu 5 291 -21 207 0 0 0 chr10 68243455 68243478 -77345810 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 11827 130 48 33 chr10 68243478 68244540 -77344748 - Tigger1 DNA MER2_type -927 1491 379 1478 146 138 0 chr10 68244542 68244795 -77344493 + Ricksha DNA DNA 2 289 -2957 1269 134 90 0 chr10 68244793 68244994 -77344294 + Ricksha DNA DNA 1821 2039 -1207 * 5214 134 43 14 chr10 68245013 68245894 -77343394 + Ricksha DNA DNA 2208 3114 -132 2877 174 107 52 chr10 68245894 68246606 -77342682 - L1MB8 LINE L1 -78 6100 5350 1569 218 123 12 chr10 68246741 68247202 -77342086 - L1ME3A LINE L1 -14 6156 5658 274 250 15 0 chr10 68247774 68247842 -77341446 - L1ME LINE L1 -5998 72 4 640 237 33 95 chr10 68247853 68248064 -77341224 + MER63A DNA MER1_type 9 206 -4 23 0 0 0 chr10 68248348 68248371 -77340917 + AT_rich Low_complexity Low_complexity 1 23 0 2091 107 0 0 chr10 68248625 68248897 -77340391 + AluY SINE Alu 21 292 -19 2557 122 8 3 chr10 68249323 68249676 -77339612 + THE1A LTR MaLR 1 355 0 10774 22 5 0 chr10 68249689 68251668 -77337620 + L1PA4 LINE L1 4175 6147 -8 315 65 0 0 chr10 68251670 68251716 -77337572 + (TA)n Simple_repeat Simple_repeat 2 47 0 498 218 0 0 chr10 68252567 68252723 -77336565 + (TA)n Simple_repeat Simple_repeat 2 157 0 229 270 0 40 chr10 68252732 68252832 -77336456 + L1MC4 LINE L1 6611 6706 -1336 538 304 33 16 chr10 68253128 68253371 -77335917 - L1MEd LINE L1 -5281 838 592 1404 206 56 21 chr10 68253375 68253748 -77335540 - Zaphod DNA AcHobo 0 4031 3646 2768 254 47 11 chr10 68253753 68254535 -77334753 - Zaphod DNA AcHobo -3160 871 62 413 329 130 54 chr10 68254536 68255074 -77334214 - L1MEd LINE L1 -5535 584 6 204 312 121 21 chr10 68255333 68255474 -77333814 + MIR SINE MIR 5 159 -103 673 228 39 22 chr10 68256203 68256383 -77332905 + L1ME LINE L1 5346 5528 -634 9444 189 29 15 chr10 68256395 68258434 -77330854 + L1MEc LINE L1 2224 5472 -743 3957 157 72 10 chr10 68258434 68258955 -77330333 + L1PA16 LINE L1 5446 6030 -136 2297 135 39 33 chr10 68258955 68259317 -77329971 - THE1B LTR MaLR 0 364 1 3957 157 72 10 chr10 68259317 68259454 -77329834 + L1PA16 LINE L1 6030 6157 -9 2512 255 139 34 chr10 68259459 68259612 -77329676 + L1M4 LINE L1 2161 2297 -3849 526 236 36 0 chr10 68259612 68259722 -77329566 + MER81 DNA DNA 1 114 0 2512 255 139 34 chr10 68259722 68261480 -77327808 + L1M4 LINE L1 2297 4329 -1817 216 0 0 0 chr10 68261480 68261504 -77327784 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 1390 43 0 6 chr10 68261506 68261670 -77327618 - AluY SINE Alu -30 281 119 188 257 67 76 chr10 68261722 68261827 -77327461 - L2 LINE L2 -178 3094 2991 1535 118 0 13 chr10 68264815 68265043 -77324245 - AluSg/x SINE Alu -2 310 86 213 154 0 0 chr10 68267990 68268029 -77321259 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 372 22 0 0 chr10 68268389 68268434 -77320854 + (TG)n Simple_repeat Simple_repeat 2 46 0 1581 164 57 114 chr10 68268465 68268850 -77320438 - MLT1A1 LTR MaLR -1 364 2 213 322 177 35 chr10 68269307 68269590 -77319698 - L2 LINE L2 -44 3228 2906 2918 88 6 0 chr10 68269612 68269965 -77319323 + THE1A LTR MaLR 1 355 0 11906 88 5 15 chr10 68269965 68270477 -77318811 + THE1A-int LTR MaLR 1 517 -1063 7012 61 5 0 chr10 68270477 68271783 -77317505 - L1PA7 LINE L1 -5 6149 4813 11906 88 5 15 chr10 68271783 68272866 -77316422 + THE1A-int LTR MaLR 517 1580 0 2769 69 6 19 chr10 68272866 68273182 -77316106 + THE1A LTR MaLR 1 313 -42 3922 111 0 4 chr10 68273182 68273695 -77315593 - MER9 LTR ERVK 0 511 1 2769 69 6 19 chr10 68273695 68273738 -77315550 + THE1A LTR MaLR 313 355 0 2473 147 32 34 chr10 68273738 68274146 -77315142 + MSTB LTR MaLR 20 426 0 3543 191 19 36 chr10 68274252 68274975 -77314313 + MER50 LTR ERV1 1 711 -23 9765 141 10 40 chr10 68274976 68276644 -77312644 + MER50-int LTR ERV1 1 1732 -5473 1285 173 25 111 chr10 68276642 68276966 -77312322 + MER50-int LTR ERV1 1555 1850 -5355 * 6077 183 32 87 chr10 68276958 68278366 -77310922 + MER50-int LTR ERV1 2784 4114 -3091 * 6909 126 12 10 chr10 68278355 68279368 -77309920 + MER50-int LTR ERV1 6182 7196 -9 3590 179 55 34 chr10 68279368 68280073 -77309215 + MER50 LTR ERV1 1 720 -14 215 358 50 41 chr10 68280092 68280310 -77308978 - L2 LINE L2 -542 2772 2553 1000 283 102 30 chr10 68280482 68281284 -77308004 - L2 LINE L2 0 3313 2466 343 330 122 3 chr10 68281407 68281701 -77307587 + L1ME2 LINE L1 4887 5215 -931 743 259 65 12 chr10 68281725 68282028 -77307260 + L1ME2 LINE L1 5684 5954 -210 1527 197 227 66 chr10 68282470 68283033 -77306255 + MLT1E1 LTR MaLR 1 654 0 215 349 40 20 chr10 68283740 68283889 -77305399 - L2 LINE L2 0 3272 3121 245 211 0 84 chr10 68284813 68284884 -77304404 + MER69 DNA AcHobo 2462 2526 0 353 238 23 64 chr10 68285269 68285441 -77303847 - L1ME4a LINE L1 -30 6091 5927 27 29 0 0 chr10 68285442 68285476 -77303812 + AT_rich Low_complexity Low_complexity 1 34 0 1166 239 94 66 chr10 68285575 68286076 -77303212 - MLT1H1 LTR MaLR -38 517 3 1043 193 14 24 chr10 68286092 68286299 -77302989 - MER3 DNA MER1_type 0 209 5 467 281 23 76 chr10 68286304 68286606 -77302682 + L1MC4 LINE L1 6653 7025 -1017 15418 195 30 10 chr10 68286634 68291316 -77297972 + L1PA13 LINE L1 1 4857 -1940 4082 96 7 7 chr10 68291359 68291902 -77297386 + L1PA13 LINE L1 6270 6812 -2 524 297 25 21 chr10 68291925 68292175 -77297113 + L1MC4 LINE L1 7017 7231 -730 678 250 70 78 chr10 68292305 68292532 -77296756 + L1MC5 LINE L1 7305 7532 -429 2217 109 0 0 chr10 68292532 68292872 -77296416 + AluSq SINE Alu 1 340 0 678 250 70 78 chr10 68292872 68293255 -77296033 + L1MC5 LINE L1 7532 7911 -50 993 176 0 24 chr10 68293644 68293814 -77295474 + FRAM SINE Alu 1 166 0 920 149 0 0 chr10 68294779 68294913 -77294375 - L1PA10 LINE L1 -13 6155 6022 4670 91 27 9 chr10 68294914 68295625 -77293663 - L1PA10 LINE L1 -286 5882 5163 6155 151 21 31 chr10 68295625 68296707 -77292581 - MER11C LTR ERVK 0 1071 1 4670 91 27 9 chr10 68296707 68296854 -77292434 - L1PA10 LINE L1 -1005 5163 5020 479 234 0 47 chr10 68297349 68297456 -77291832 - L2 LINE L2 -16 3297 3196 622 236 144 42 chr10 68297475 68297788 -77291500 - MER7A DNA MER2_type -1 345 3 2902 277 163 25 chr10 68297982 68299432 -77289856 + L2 LINE L2 1217 2865 -449 529 144 0 62 chr10 68299450 68299547 -77289741 + MLT2B3 LTR ERVL 462 552 -2 246 95 0 0 chr10 68299613 68299655 -77289633 + (TG)n Simple_repeat Simple_repeat 2 43 0 21 36 0 0 chr10 68300465 68300493 -77288795 + AT_rich Low_complexity Low_complexity 1 28 0 243 353 74 8 chr10 68301738 68301854 -77287434 + L2 LINE L2 2971 3095 -172 998 190 115 20 chr10 68301854 68302054 -77287234 - MER20 DNA MER1_type 0 219 1 1904 186 22 22 chr10 68302065 68302430 -77286858 + MLT1A1 LTR MaLR 1 365 0 1527 204 80 13 chr10 68302586 68303090 -77286198 - MLT1E2 LTR MaLR -8 618 89 1450 165 62 55 chr10 68303097 68303313 -77285975 - LTR52 LTR ERVL -104 317 97 1640 207 25 17 chr10 68303313 68303671 -77285617 - MLT1A1 LTR MaLR 0 365 5 1450 165 62 55 chr10 68303671 68303763 -77285525 - LTR52 LTR ERVL -324 97 7 2079 103 46 0 chr10 68303815 68304097 -77285191 - AluSg SINE Alu -15 295 1 44867 36 2 10 chr10 68304118 68310326 -77278962 - L1PA4 LINE L1 0 6155 1 240 254 32 0 chr10 68310952 68311015 -77278273 + L3 LINE CR1 733 797 -780 234 105 0 0 chr10 68311284 68311322 -77277966 + (TG)n Simple_repeat Simple_repeat 1 38 0 1385 190 29 89 chr10 68311416 68311763 -77277525 + Charlie1a DNA MER1_type 5 330 -1125 687 187 36 14 chr10 68311775 68311914 -77277374 + MLT2F LTR ERVL 522 663 0 211 272 48 72 chr10 68311922 68312047 -77277241 + L3 LINE CR1 1230 1351 -226 554 245 223 0 chr10 68312052 68312236 -77277052 + MIR SINE MIR 28 252 -10 181 288 91 0 chr10 68312249 68312315 -77276973 + L3 LINE CR1 1335 1406 -171 3041 109 25 2 chr10 68312319 68312761 -77276527 - Tigger2 DNA MER2_type 0 2718 2267 452 118 15 0 chr10 68312745 68312813 -77276475 - Tigger2 DNA MER2_type -2649 69 1 * 213 340 13 0 chr10 68312899 68312985 -77276303 + MIR SINE MIR 58 144 -64 422 315 0 63 chr10 68313047 68313190 -77276098 + L3 LINE CR1 1437 1570 -7 38 0 0 0 chr10 68313251 68313289 -77275999 + AT_rich Low_complexity Low_complexity 1 38 0 256 330 11 78 chr10 68314071 68314262 -77275026 - MER5B DNA MER1_type 0 178 1 2151 62 0 11 chr10 68314680 68314940 -77274348 + AluSg SINE Alu 39 295 -15 221 146 0 0 chr10 68314996 68315037 -77274251 + L2 LINE L2 3273 3313 0 449 239 49 49 chr10 68315524 68315687 -77273601 + MLT1J1 LTR MaLR 1 163 -283 256 208 21 0 chr10 68315800 68315848 -77273440 - MLT1J2 LTR MaLR -152 298 250 406 206 0 0 chr10 68316080 68316153 -77273135 + MIR SINE MIR 78 150 -112 5266 120 21 15 chr10 68316156 68316964 -77272324 + L1PA16 LINE L1 5352 6164 -2 478 143 52 0 chr10 68316978 68317055 -77272233 - AluSg/x SINE Alu -15 297 217 238 185 15 62 chr10 68317055 68317120 -77272168 + MIR SINE MIR 137 198 -64 45 34 0 0 chr10 68317422 68317481 -77271807 + AT_rich Low_complexity Low_complexity 1 59 0 185 163 102 61 chr10 68317965 68318014 -77271274 - L2 LINE L2 -12 3260 3210 1974 131 0 20 chr10 68319499 68319819 -77269469 - AluSx SINE Alu 0 312 1 428 271 145 14 chr10 68320253 68320467 -77268821 + MIR SINE MIR 14 255 -7 1237 212 163 34 chr10 68320487 68320594 -77268694 - MSTD LTR MaLR 0 396 304 1964 130 98 9 chr10 68320594 68320909 -77268379 - MER61A LTR ERV1 0 343 1 1237 212 163 34 chr10 68320909 68321150 -77268138 - MSTD LTR MaLR -92 304 3 720 312 118 54 chr10 68321233 68321733 -77267555 + L3 LINE CR1 561 1092 -485 216 0 0 0 chr10 68322961 68322985 -77266303 + (T)n Simple_repeat Simple_repeat 1 24 0 294 302 108 23 chr10 68323847 68323976 -77265312 + MIR3 SINE MIR 19 158 -50 2211 113 7 3 chr10 68324173 68324473 -77264815 + AluSg SINE Alu 1 301 -9 419 304 60 15 chr10 68324872 68325073 -77264215 + MIR SINE MIR 47 256 -6 1845 161 19 7 chr10 68326278 68326588 -77262700 - MLT1C LTR MaLR -4 463 150 611 214 0 0 chr10 68326600 68326717 -77262571 + MLT1B LTR MaLR 1 117 -273 22 0 0 0 chr10 68328738 68328760 -77260528 + AT_rich Low_complexity Low_complexity 1 22 0 5343 119 56 15 chr10 68328761 68328914 -77260374 - L1MA6 LINE L1 -5 6295 6150 2053 100 11 0 chr10 68328914 68329183 -77260105 - AluSx SINE Alu -18 294 23 5343 119 56 15 chr10 68329183 68329909 -77259379 - L1MA6 LINE L1 -150 6150 5380 559 263 112 27 chr10 68329912 68330136 -77259152 - L1M1 LINE L1 -5425 2140 1898 243 188 0 0 chr10 68330163 68330211 -77259077 - L1M1 LINE L1 -4635 1930 1883 509 288 16 8 chr10 68330244 68330452 -77258836 - L1M1 LINE L1 -6676 813 213 1234 275 110 23 chr10 68330691 68331380 -77257908 - L1M1 LINE L1 -6588 901 16 234 317 10 29 chr10 68332503 68332607 -77256681 - MIR SINE MIR -51 211 110 2190 202 40 20 chr10 68332615 68333071 -77256217 - MLT1C LTR MaLR 0 467 3 554 32 0 0 chr10 68333524 68333586 -77255702 - HERV17 LTR ERV1 -2776 5850 5789 * 1553 81 14 27 chr10 68333534 68333755 -77255533 + HERV17 LTR ERV1 5802 6019 -2607 276 103 0 0 chr10 68333748 68333787 -77255501 + HERV17 LTR ERV1 7510 7548 -1078 * 2436 62 0 0 chr10 68333777 68334069 -77255219 + HERV17 LTR ERV1 8335 8626 0 2675 58 0 0 chr10 68334069 68334395 -77254893 + LTR17 LTR ERV1 1 326 -454 325 196 0 0 chr10 68334577 68334633 -77254655 + MER94 DNA DNA 1 56 -78 23 33 0 0 chr10 68334733 68334763 -77254525 + AT_rich Low_complexity Low_complexity 1 30 0 504 255 27 33 chr10 68335018 68335202 -77254086 + MER114 LTR ERV 4 186 -462 1822 186 22 6 chr10 68335216 68335581 -77253707 - L1 LINE L1 -2391 3755 3385 * 9032 164 29 14 chr10 68335579 68337952 -77251336 + L1MA4 LINE L1 3611 6020 -280 22 0 0 0 chr10 68337961 68337983 -77251305 + AT_rich Low_complexity Low_complexity 1 22 0 5747 149 13 4 chr10 68337983 68339275 -77250013 + L1M2 LINE L1 4345 5651 -640 2765 117 5 8 chr10 68339926 68340302 -77248986 - THE1C LTR MaLR 0 375 1 10849 107 32 40 chr10 68340302 68341894 -77247394 - THE1C-int LTR MaLR 0 1580 1 230 97 0 0 chr10 68342095 68342126 -77247162 + MER63A DNA MER1_type 1 31 -179 564 244 23 8 chr10 68342163 68342294 -77246994 + MER63A DNA MER1_type 39 171 -39 2062 138 0 10 chr10 68346085 68346383 -77242905 - AluSx SINE Alu -17 295 1 226 143 54 36 chr10 68346383 68346439 -77242849 - HSMAR1 DNA Mariner -3 1284 1228 599 291 11 6 chr10 68346576 68346758 -77242530 - MIR SINE MIR -5 257 75 2218 89 0 0 chr10 68350965 68351236 -77238052 + AluSx SINE Alu 1 271 -41 672 249 116 46 chr10 68353355 68353596 -77235692 - MIR SINE MIR 0 262 5 2061 117 31 0 chr10 68353701 68353991 -77235297 - AluSx SINE Alu -13 299 1 2897 174 46 61 chr10 68354494 68355448 -77233840 - LTR13 LTR ERVK 0 1007 16 407 299 61 30 chr10 68356211 68356408 -77232880 + MIR3 SINE MIR 4 206 -2 1300 222 75 49 chr10 68356807 68357194 -77232094 + MLT2C1 LTR ERVL 1 397 0 848 205 36 18 chr10 68357744 68357910 -77231378 - MER20 DNA MER1_type -50 169 1 361 257 187 18 chr10 68358310 68358483 -77230805 + MIR SINE MIR 64 262 0 5678 155 15 13 chr10 68359671 68361155 -77228133 - L1PA16 LINE L1 0 6166 4680 423 311 51 62 chr10 68361434 68361691 -77227597 + MLT1K LTR MaLR 166 419 -169 23 0 0 0 chr10 68361692 68361715 -77227573 + AT_rich Low_complexity Low_complexity 1 23 0 700 287 91 57 chr10 68362731 68363083 -77226205 + L2 LINE L2 2950 3313 0 321 286 14 0 chr10 68363147 68363217 -77226071 + MIR SINE MIR 1 71 -191 471 258 19 57 chr10 68363345 68363588 -77225700 + MIR SINE MIR 37 261 -1 207 273 45 15 chr10 68364084 68364150 -77225138 + MIR SINE MIR 88 155 -107 391 264 163 47 chr10 68364404 68364681 -77224607 + L2 LINE L2 3005 3313 0 356 326 38 23 chr10 68365551 68365683 -77223605 - L2 LINE L2 0 3272 3139 1683 203 39 9 chr10 68365785 68366115 -77223173 - MER58B DNA MER1_type -1 340 1 232 245 7 84 chr10 68366205 68366348 -77222940 + G-rich Low_complexity Low_complexity 6 137 0 276 118 0 0 chr10 68366367 68366418 -77222870 + L1MA3 LINE L1 6255 6305 0 234 273 57 23 chr10 68366509 68366597 -77222691 - MER103 DNA DNA -68 98 8 237 299 274 13 chr10 68367878 68368035 -77221253 - MIR3 SINE MIR -6 202 5 473 120 217 0 chr10 68368746 68368838 -77220450 + MER53 DNA DNA 1 112 -77 472 290 53 0 chr10 68368916 68369047 -77220241 - MIR3 SINE MIR -21 187 50 816 161 0 8 chr10 68372659 68372789 -77216499 - AluJb SINE Alu -181 131 3 222 300 0 0 chr10 68372926 68372986 -77216302 + L2 LINE L2 3213 3272 0 485 271 99 57 chr10 68373075 68373267 -77216021 + MIR SINE MIR 25 224 -38 271 268 83 71 chr10 68374948 68375116 -77214172 + MER5A DNA MER1_type 5 174 -15 619 259 35 35 chr10 68375117 68375291 -77213997 + MER5B DNA MER1_type 1 174 -4 403 279 130 19 chr10 68375658 68375819 -77213469 + L2 LINE L2 3130 3308 -5 2230 94 14 0 chr10 68377412 68377709 -77211579 + AluSp SINE Alu 1 301 -12 263 309 29 0 chr10 68377895 68377963 -77211325 - L2 LINE L2 -18 3254 3185 400 296 26 53 chr10 68378091 68378280 -77211008 - MIR SINE MIR -46 216 33 567 0 0 0 chr10 68378342 68378405 -77210883 + (CA)n Simple_repeat Simple_repeat 2 64 0 616 188 39 8 chr10 68379169 68379297 -77209991 - MIR SINE MIR -101 161 30 180 0 0 0 chr10 68379953 68379973 -77209315 + (TC)n Simple_repeat Simple_repeat 2 21 0 951 144 0 0 chr10 68379973 68380112 -77209176 - AluSg/x SINE Alu -19 293 155 22 56 0 0 chr10 68380167 68380203 -77209085 + AT_rich Low_complexity Low_complexity 1 36 0 296 204 68 34 chr10 68380260 68380348 -77208940 + MIR SINE MIR 91 181 -81 240 292 0 31 chr10 68380693 68380801 -77208487 + (CATG)n Simple_repeat Simple_repeat 1 104 0 258 225 100 12 chr10 68381530 68381610 -77207678 + L1MC/D LINE L1 5458 5544 -2264 283 117 67 17 chr10 68381957 68382017 -77207271 + HsTC2 DNA Tc2 39 101 -1797 468 279 20 66 chr10 68382028 68382225 -77207063 - L1MEd LINE L1 -5487 632 445 253 250 0 0 chr10 68382374 68382430 -77206858 + HsTC2 DNA Tc2 1824 1879 -19 258 292 0 0 chr10 68383509 68383574 -77205714 - L2 LINE L2 -14 3299 3235 28 29 0 0 chr10 68384042 68384077 -77205211 + AT_rich Low_complexity Low_complexity 1 35 0 415 247 11 0 chr10 68386607 68386696 -77202592 + MER58B DNA MER1_type 252 341 0 1797 181 127 22 chr10 68386982 68387392 -77201896 + MSTB2 LTR MaLR 5 457 0 300 53 0 0 chr10 68388707 68388745 -77200543 + (TG)n Simple_repeat Simple_repeat 1 38 0 1787 161 7 4 chr10 68388745 68389025 -77200263 - AluSx SINE Alu -31 281 1 2408 91 0 0 chr10 68389179 68389487 -77199801 - AluY SINE Alu -3 308 1 1265 193 19 87 chr10 68389495 68389817 -77199471 - AluJo SINE Alu -12 300 1 400 310 19 19 chr10 68389894 68390049 -77199239 - MIR3 SINE MIR -40 168 14 272 299 37 28 chr10 68391064 68391171 -77198117 + MIR SINE MIR 112 219 -43 235 251 34 31 chr10 68392183 68392259 -77197029 - MER5A DNA MER1_type -82 106 20 622 235 84 47 chr10 68392606 68392951 -77196337 + LTR18B LTR ERVL 1 614 0 319 248 62 26 chr10 68393779 68393892 -77195396 + MIR SINE MIR 37 153 -109 1186 309 32 22 chr10 68394283 68394785 -77194503 - LTR33 LTR ERVL -4 517 11 2264 122 0 0 chr10 68394895 68395199 -77194089 - AluSx SINE Alu -8 304 1 403 279 47 29 chr10 68395264 68395436 -77193852 + MIR SINE MIR 24 198 -64 1790 259 54 28 chr10 68396686 68397422 -77191866 + L2 LINE L2 2514 3263 -50 396 297 10 10 chr10 68397466 68397567 -77191721 - L2 LINE L2 -4 3268 3168 755 226 50 0 chr10 68397753 68397912 -77191376 - MLT1A1 LTR MaLR 0 365 199 406 258 31 31 chr10 68399221 68399349 -77189939 - MIR SINE MIR -116 146 19 311 293 17 92 chr10 68399326 68399500 -77189788 + MIR SINE MIR 29 189 -73 * 264 253 72 36 chr10 68399872 68399955 -77189333 + MIR SINE MIR 84 169 -93 752 250 57 42 chr10 68399964 68400228 -77189060 - L2 LINE L2 0 3313 3046 340 135 0 0 chr10 68400229 68400281 -77189007 + MLT1A1 LTR MaLR 1 52 -313 * 446 198 0 0 chr10 68400278 68400359 -77188929 - MLT1A1 LTR MaLR -223 142 62 237 140 120 0 chr10 68400374 68400424 -77188864 + MLT1A1 LTR MaLR 307 362 -3 592 218 21 0 chr10 68401114 68401256 -77188032 + MER117 DNA MER1_type 3 147 -50 243 306 87 44 chr10 68402484 68402667 -77186621 - L2 LINE L2 -213 3059 2869 324 0 0 0 chr10 68403240 68403276 -77186012 + (TG)n Simple_repeat Simple_repeat 2 37 0 249 291 9 55 chr10 68404071 68404181 -77185107 - MIR3 SINE MIR -3 205 101 289 248 106 35 chr10 68404447 68404560 -77184728 - MIR3 SINE MIR -11 197 77 248 191 32 16 chr10 68404627 68404690 -77184598 - MIR3 SINE MIR -133 75 12 3014 174 11 25 chr10 68405619 68406181 -77183107 + MER41C LTR ERV1 1 554 0 306 244 39 0 chr10 68406840 68406918 -77182370 + MIR SINE MIR 112 192 -70 477 193 37 37 chr10 68407125 68407234 -77182054 + MER5A DNA MER1_type 1 109 -80 592 208 77 0 chr10 68407234 68407364 -77181924 + MER5A DNA MER1_type 48 187 -2 575 317 45 53 chr10 68408549 68408928 -77180360 - L1MEd LINE L1 -5451 668 293 523 183 75 17 chr10 68408941 68409061 -77180227 + MLT1C LTR MaLR 1 127 -378 40644 39 21 1 chr10 68409061 68415090 -77174198 + L1PA3 LINE L1 3 6151 -4 898 234 95 11 chr10 68415227 68415500 -77173788 + MLT1C LTR MaLR 172 467 0 241 224 0 15 chr10 68415722 68415789 -77173499 - L1MEd LINE L1 -6004 115 50 1710 241 74 37 chr10 68416532 68417103 -77172185 - MLT1E LTR MaLR 0 593 3 638 268 70 108 chr10 68417257 68417831 -77171457 + L2 LINE L2 2049 3313 0 22 0 0 0 chr10 68418430 68418452 -77170836 + AT_rich Low_complexity Low_complexity 1 22 0 400 302 84 17 chr10 68419665 68419844 -77169444 - MIR SINE MIR -50 212 22 278 228 0 13 chr10 68421296 68421375 -77167913 + L1ME4a LINE L1 5573 5650 -471 346 285 150 35 chr10 68421434 68421774 -77167514 + L1ME4a LINE L1 5691 6069 -52 181 308 0 0 chr10 68423346 68423385 -77165903 + L2 LINE L2 3012 3050 -222 465 280 55 74 chr10 68423567 68423824 -77165464 - MIR SINE MIR -1 261 10 33 25 0 0 chr10 68423852 68423892 -77165396 + AT_rich Low_complexity Low_complexity 1 40 0 883 291 45 0 chr10 68424119 68424408 -77164880 - MLT1I LTR MaLR -2 407 106 310 218 138 23 chr10 68424783 68424870 -77164418 + MIR SINE MIR 36 132 -76 219 310 166 37 chr10 68424877 68425064 -77164224 - L3b LINE CR1 -164 1419 1209 304 301 28 108 chr10 68426382 68426558 -77162730 + MER5A DNA MER1_type 28 189 0 230 298 77 19 chr10 68426792 68426896 -77162392 - L2 LINE L2 -15 3298 3189 234 240 0 0 chr10 68427138 68427188 -77162100 + MLT1J LTR MaLR 112 161 -350 * 284 295 53 37 chr10 68427158 68427348 -77161940 + MLT1L LTR MaLR 198 390 -225 380 342 35 5 chr10 68427640 68427842 -77161446 + MLT1K LTR MaLR 12 219 -369 401 321 46 0 chr10 68428045 68428176 -77161112 + L3 LINE CR1 1440 1576 -1 281 328 61 8 chr10 68428328 68428459 -77160829 + MIR SINE MIR 16 153 -109 360 311 60 55 chr10 68428508 68428691 -77160597 - MIR SINE MIR -9 253 70 243 157 20 39 chr10 68429453 68429504 -77159784 - MLT1J2 LTR MaLR -341 109 60 432 287 62 73 chr10 68429585 68429926 -77159362 + MLT1I LTR MaLR 71 407 -2 409 412 81 18 chr10 68430179 68430543 -77158745 - L2 LINE L2 -42 3230 2847 215 300 17 0 chr10 68433423 68433483 -77155805 - L2 LINE L2 -1 3312 3252 905 211 55 55 chr10 68433564 68433972 -77155316 - MLT1A1 LTR MaLR 0 365 1 816 223 10 45 chr10 68534057 68534259 -77055029 - AluJb SINE Alu -117 195 1 250 257 14 0 chr10 68534283 68534353 -77054935 - L1M4b LINE L1 -6779 80 10 1866 152 76 23 chr10 68534600 68534943 -77054345 - THE1B LTR MaLR 0 364 4 2889 231 50 16 chr10 68535239 68536271 -77053017 + L1PA15-16 LINE L1 2063 3123 -3726 1553 75 0 8 chr10 68536430 68536670 -77052618 - L1P LINE L1 -2772 3374 3137 3820 83 9 7 chr10 68536679 68537247 -77052041 - L1P LINE L1 -3593 2553 1985 198 0 0 0 chr10 68537605 68537627 -77051661 + (A)n Simple_repeat Simple_repeat 1 22 0 1833 203 34 5 chr10 68537862 68538242 -77051046 - MSTB LTR MaLR 0 426 36 2092 202 20 29 chr10 68539054 68539123 -77050165 + L1 LINE L1 4318 4386 -1760 4944 65 3 0 chr10 68539123 68539752 -77049536 + L1PA7 LINE L1 5518 6148 -6 2092 202 20 29 chr10 68539752 68540267 -77049021 + L1 LINE L1 4386 4897 -1249 23 33 0 0 chr10 68540512 68540542 -77048746 + AT_rich Low_complexity Low_complexity 1 30 0 277 282 51 0 chr10 68540981 68541059 -77048229 + MIR SINE MIR 12 93 -169 2121 127 0 0 chr10 68541293 68541584 -77047704 - AluSx SINE Alu -19 293 3 1635 38 47 4 chr10 68541616 68541852 -77047436 - AluYb8 SINE Alu 0 318 73 7094 172 11 23 chr10 68541971 68543456 -77045832 - L1PBa LINE L1 -864 5998 4532 2393 97 0 6 chr10 68543866 68544177 -77045111 + AluSc SINE Alu 1 309 0 1916 159 13 0 chr10 68544214 68544522 -77044766 + AluJo SINE Alu 1 312 0 23 68 0 0 chr10 68544676 68544720 -77044568 + AT_rich Low_complexity Low_complexity 1 44 0 189 0 0 0 chr10 68545005 68545026 -77044262 + (T)n Simple_repeat Simple_repeat 1 21 0 1340 293 107 19 chr10 68545586 68546231 -77043057 + L2 LINE L2 1701 2402 -912 5546 165 63 11 chr10 68546496 68547421 -77041867 - L1PBa LINE L1 -2616 4246 3371 1984 151 0 0 chr10 68547421 68547706 -77041582 - AluSx SINE Alu -27 285 1 5546 165 63 11 chr10 68547706 68550268 -77039020 - L1PBa LINE L1 -3491 3371 432 736 222 11 5 chr10 68550267 68550456 -77038832 - L1PBa LINE L1 -6668 195 6 * 246 225 38 50 chr10 68551540 68551620 -77037668 - MIR SINE MIR -18 244 166 2133 146 16 24 chr10 68552647 68553025 -77036263 + THE1C LTR MaLR 1 375 0 9332 116 84 6 chr10 68553025 68554491 -77034797 + THE1C-int LTR MaLR 1 1580 0 2062 165 13 21 chr10 68554491 68554867 -77034421 + THE1C LTR MaLR 1 373 -2 507 258 46 26 chr10 68555223 68555417 -77033871 + MIR SINE MIR 63 260 -2 963 339 103 5 chr10 68555766 68556400 -77032888 - L2 LINE L2 -226 3087 2395 214 305 0 0 chr10 68557373 68557432 -77031856 + (CTTG)n Simple_repeat Simple_repeat 2 60 0 25 51 0 0 chr10 68558149 68558188 -77031100 + AT_rich Low_complexity Low_complexity 1 39 0 2075 118 0 0 chr10 68558486 68558788 -77030500 + AluSc SINE Alu 1 302 0 231 200 0 0 chr10 68558816 68558861 -77030427 + Alu SINE Alu 1 45 -258 194 393 25 8 chr10 68559101 68559223 -77030065 - MIR3 SINE MIR -8 200 77 268 74 0 56 chr10 68559521 68559575 -77029713 + (AGGGGG)n Simple_repeat Simple_repeat 2 52 0 260 294 76 22 chr10 68561401 68561493 -77027795 - L2 LINE L2 -31 3241 3145 1708 208 7 0 chr10 68561543 68561837 -77027451 - AluJo SINE Alu -16 296 1 199 295 0 124 chr10 68562068 68562197 -77027091 + MIR SINE MIR 49 161 -101 3111 120 43 6 chr10 68562207 68562700 -77026588 - MER9 LTR ERVK 0 511 1 2280 173 30 1 chr10 68562701 68563233 -77026055 + LTR69 LTR ERVL 1 588 0 195 196 0 39 chr10 68563574 68563625 -77025663 + L2 LINE L2 3265 3313 0 206 241 0 0 chr10 68563985 68564039 -77025249 + A-rich Low_complexity Low_complexity 1 54 0 203 338 38 12 chr10 68564900 68564980 -77024308 + MER5B DNA MER1_type 80 161 -17 198 231 58 0 chr10 68565019 68565071 -77024217 - MIR SINE MIR -12 250 196 414 382 26 5 chr10 68565100 68565291 -77023997 - MIR SINE MIR -58 204 10 577 195 27 87 chr10 68565319 68565468 -77023820 + MLT2E LTR ERVL 13 152 -476 500 293 57 13 chr10 68565583 68565849 -77023439 - L1ME LINE L1 -622 5525 5241 2063 130 3 0 chr10 68565932 68566217 -77023071 - AluSx SINE Alu -13 299 14 1364 272 68 70 chr10 68566266 68567653 -77021635 - L1ME LINE L1 -1092 5037 3654 357 283 85 45 chr10 68567653 68567830 -77021458 - L1ME LINE L1 -4734 1395 1212 397 296 55 36 chr10 68567833 68568107 -77021181 - L1ME LINE L1 -4925 1194 916 21 0 0 0 chr10 68568164 68568185 -77021103 + AT_rich Low_complexity Low_complexity 1 21 0 1897 131 67 0 chr10 68568483 68568765 -77020523 - AluSx SINE Alu -11 301 1 210 222 0 32 chr10 68569385 68569448 -77019840 + (CATATA)n Simple_repeat Simple_repeat 5 65 0 22 0 0 0 chr10 68569808 68569830 -77019458 + AT_rich Low_complexity Low_complexity 1 22 0 254 253 33 11 chr10 68569941 68570032 -77019256 + MIR SINE MIR 120 212 -50 277 309 164 26 chr10 68570263 68570415 -77018873 + MIR SINE MIR 34 206 -56 204 255 20 0 chr10 68570460 68570511 -77018777 - MIR SINE MIR -108 154 103 2125 125 20 0 chr10 68572161 68572458 -77016830 + AluSq SINE Alu 4 306 -7 886 242 9 32 chr10 68572468 68572687 -77016601 + MER58A DNA MER1_type 1 214 -10 806 251 62 9 chr10 68572884 68572913 -77016375 - MIR SINE MIR -21 241 215 1667 202 104 30 chr10 68572913 68573383 -77015905 - MLT1D LTR MaLR 0 505 1 806 251 62 9 chr10 68573383 68573564 -77015724 - MIR SINE MIR -47 215 20 43866 38 3 6 chr10 68573777 68579947 -77009341 + L1PA4 LINE L1 1 6152 -3 2048 91 0 0 chr10 68580375 68580639 -77008649 - AluY SINE Alu -8 303 40 306 172 241 22 chr10 68580861 68580964 -77008324 + MER34 LTR ERV1 1 110 -432 283 276 90 64 chr10 68580937 68581093 -77008195 + MER39 LTR ERV1 260 419 -288 * 805 218 117 26 chr10 68581161 68581431 -77007857 + MER39 LTR ERV1 412 580 -5 2879 221 82 51 chr10 68582293 68583300 -77005988 - L1MC4a LINE L1 0 7808 6770 321 256 29 15 chr10 68583333 68583466 -77005822 - L1MC4a LINE L1 -1138 6739 6666 1710 242 45 33 chr10 68583648 68584219 -77005069 - L1MC4a LINE L1 -1262 6615 6038 544 302 57 47 chr10 68584241 68585095 -77004193 - L1MC4a LINE L1 -797 5418 4556 1218 156 60 115 chr10 68585182 68585566 -77003722 - MLT1A1 LTR MaLR -2 363 1 310 302 50 34 chr10 68585572 68585751 -77003537 - L1MC4a LINE L1 -1820 4395 4214 570 272 0 0 chr10 68585909 68586082 -77003206 + (CATATA)n Simple_repeat Simple_repeat 5 177 0 410 308 65 42 chr10 68586140 68586229 -77003059 - L1P LINE L1 -2165 3981 3896 1823 213 11 3 chr10 68586229 68586591 -77002697 - MLT1A1 LTR MaLR 0 365 1 410 308 65 42 chr10 68586591 68586959 -77002329 - L1P LINE L1 -2250 3896 3513 333 222 11 56 chr10 68587049 68587139 -77002149 + AluJ/FLAM SINE Alu 13 98 -204 328 333 113 28 chr10 68587392 68587789 -77001499 - L1MC4a LINE L1 -2991 3224 2794 1789 187 50 6 chr10 68587841 68588178 -77001110 - MLT1A1 LTR MaLR -2 363 12 28 48 0 0 chr10 68588205 68588247 -77001041 + AT_rich Low_complexity Low_complexity 1 42 0 319 306 82 15 chr10 68588247 68588381 -77000907 - HAL1b LINE L1 -926 422 280 1807 133 0 8 chr10 68588454 68588710 -77000578 - AluSx SINE Alu -58 254 1 198 0 0 0 chr10 68590227 68590249 -76999039 + (A)n Simple_repeat Simple_repeat 1 22 0 678 226 0 0 chr10 68590991 68591115 -76998173 - FLAM_A SINE Alu -9 124 1 356 264 50 33 chr10 68591659 68591780 -76997508 - MER91C DNA MER1_type 0 140 18 186 133 0 0 chr10 68594031 68594061 -76995227 + (GGA)n Simple_repeat Simple_repeat 3 32 0 21 0 0 0 chr10 68595039 68595060 -76994228 + AT_rich Low_complexity Low_complexity 1 21 0 935 293 15 8 chr10 68596565 68596828 -76992460 + L1MDa LINE L1 12 276 -6264 456 255 0 10 chr10 68596863 68596965 -76992323 + L1MDa LINE L1 383 483 -6057 582 291 38 0 chr10 68596975 68597185 -76992103 - L1M4 LINE L1 -1087 5059 4842 881 240 44 30 chr10 68597257 68597619 -76991669 - L1MC4a LINE L1 -3933 2463 2097 1057 292 102 58 chr10 68597716 68598008 -76991280 - L1MC4a LINE L1 -4974 1422 1144 423 0 0 0 chr10 68598008 68598055 -76991233 + (TG)n Simple_repeat Simple_repeat 2 48 0 1057 292 102 58 chr10 68598055 68599082 -76990206 - L1MC4a LINE L1 -5252 1144 46 186 191 0 0 chr10 68599347 68599394 -76989894 + (TA)n Simple_repeat Simple_repeat 1 47 0 365 235 0 12 chr10 68600312 68600397 -76988891 - MIR SINE MIR -1 261 178 424 139 0 23 chr10 68600418 68600504 -76988784 + (GGAA)n Simple_repeat Simple_repeat 3 86 0 339 240 0 0 chr10 68600620 68600724 -76988564 + (CA)n Simple_repeat Simple_repeat 2 105 0 355 320 94 58 chr10 68601055 68601489 -76987799 + MLT1K LTR MaLR 125 574 -14 244 242 132 11 chr10 68601543 68601634 -76987654 - MER103 DNA DNA -18 148 47 220 364 18 18 chr10 68601648 68601758 -76987530 - L2 LINE L2 -9 3263 3154 1447 156 151 44 chr10 68601804 68602170 -76987118 + MSTB2 LTR MaLR 3 419 -38 2285 75 10 13 chr10 68602170 68602476 -76986812 - AluY SINE Alu -6 305 1 1447 156 151 44 chr10 68602476 68602520 -76986768 + MSTB2 LTR MaLR 419 457 0 268 320 54 20 chr10 68602778 68602925 -76986363 - L2 LINE L2 -1 3312 3161 728 277 18 51 chr10 68602954 68603228 -76986060 + L2 LINE L2 3037 3301 -12 23 0 0 0 chr10 68603473 68603496 -76985792 + AT_rich Low_complexity Low_complexity 1 23 0 2001 200 63 65 chr10 68605183 68605738 -76983550 + MLT2B3 LTR ERVL 1 554 0 2166 97 0 16 chr10 68605767 68606078 -76983210 - AluSg SINE Alu -4 306 1 284 208 31 73 chr10 68606247 68606343 -76982945 - MIR3 SINE MIR -47 161 70 244 194 69 14 chr10 68606373 68606445 -76982843 - MLT1K LTR MaLR -22 566 491 309 231 25 8 chr10 68606910 68607031 -76982257 + CT-rich Low_complexity Low_complexity 2 124 0 781 155 0 0 chr10 68607122 68607238 -76982050 + FLAM_C SINE Alu 2 117 -16 366 216 45 90 chr10 68607370 68607504 -76981784 - L2 LINE L2 -5 3267 3140 393 296 93 11 chr10 68608174 68608444 -76980844 - L1ME4a LINE L1 -18 6103 5812 262 138 11 181 chr10 68608702 68608890 -76980398 + AluJb SINE Alu 1 156 -146 225 67 0 189 chr10 68608914 68609078 -76980210 + AluY SINE Alu 169 301 0 245 272 81 81 chr10 68609104 68609277 -76980011 - L1ME4a LINE L1 -598 5523 5351 21 0 0 0 chr10 68609427 68609448 -76979840 + AT_rich Low_complexity Low_complexity 1 21 0 572 204 22 0 chr10 68609519 68609656 -76979632 - L1MC4 LINE L1 -453 7589 7450 641 251 98 0 chr10 68609805 68609988 -76979300 - L1MC4 LINE L1 -598 7444 7244 1715 237 102 9 chr10 68609997 68610358 -76978930 - L1MC4 LINE L1 -962 7080 6647 315 0 0 0 chr10 68610358 68610393 -76978895 + (CA)n Simple_repeat Simple_repeat 2 36 0 1715 237 102 9 chr10 68610393 68610592 -76978696 - L1MC4 LINE L1 -1395 6647 6468 249 264 0 0 chr10 68611249 68611302 -76977986 + GA-rich Low_complexity Low_complexity 2 54 0 261 0 0 0 chr10 68611715 68611744 -76977544 + (CA)n Simple_repeat Simple_repeat 2 30 0 354 242 235 7 chr10 68611854 68612003 -76977285 + MIR SINE MIR 31 213 -49 294 336 15 8 chr10 68612331 68612462 -76976826 - Charlie8 DNA MER1_type -2190 227 96 22 0 0 0 chr10 68612810 68612832 -76976456 + AT_rich Low_complexity Low_complexity 1 22 0 737 195 0 0 chr10 68613114 68613242 -76976046 + FLAM_C SINE Alu 2 129 -4 189 211 0 0 chr10 68614335 68614387 -76974901 + GA-rich Low_complexity Low_complexity 1 52 0 644 253 129 4 chr10 68615033 68615258 -76974030 - MIR SINE MIR 0 262 10 5865 143 21 23 chr10 68615403 68616927 -76972361 + L1PB1 LINE L1 4631 6149 -2 5194 147 48 48 chr10 68617006 68618057 -76971231 + L1MC1 LINE L1 5281 6331 -2 34 55 0 0 chr10 68618214 68618269 -76971019 + AT_rich Low_complexity Low_complexity 1 55 0 285 181 19 38 chr10 68618294 68618399 -76970889 + (TTA)n Simple_repeat Simple_repeat 3 105 0 3172 164 99 30 chr10 68618528 68618788 -76970500 + MER50 LTR ERV1 1 242 -492 2453 68 0 0 chr10 68618788 68619084 -76970204 + AluSc SINE Alu 1 296 -13 3172 164 99 30 chr10 68619084 68619488 -76969800 + MER50 LTR ERV1 242 711 -23 273 207 0 39 chr10 68619489 68619594 -76969694 - L1ME LINE L1 -722 5432 5333 207 100 0 0 chr10 68619811 68619841 -76969447 + (TAAA)n Simple_repeat Simple_repeat 1 30 0 451 354 40 30 chr10 68620306 68620504 -76968784 + L2 LINE L2 3073 3272 0 2837 166 157 0 chr10 68621087 68621667 -76967621 - LTR51 LTR ERV1 0 671 1 3600 157 56 15 chr10 68622128 68622189 -76967099 + MER67C LTR ERV1 1 58 -652 2314 108 0 0 chr10 68622189 68622494 -76966794 + AluSg SINE Alu 1 305 -5 3600 157 56 15 chr10 68622494 68623114 -76966174 + MER67C LTR ERV1 58 710 0 952 208 75 95 chr10 68623950 68624244 -76965044 + AluJo SINE Alu 2 289 -13 1000 163 31 0 chr10 68624264 68624424 -76964864 + AluJo SINE Alu 122 286 -26 430 326 14 7 chr10 68625744 68625885 -76963403 + MLT2E LTR ERVL 2 143 -485 22 0 0 0 chr10 68625892 68625914 -76963374 + AT_rich Low_complexity Low_complexity 1 22 0 1964 124 3 41 chr10 68625919 68626210 -76963078 + AluSx SINE Alu 15 294 -18 4278 158 11 4 chr10 68626221 68626999 -76962289 - L1MA7 LINE L1 -31 6260 5365 665 150 0 18 chr10 68626997 68627110 -76962178 + L1 LINE L1 4804 4914 -1232 * 249 242 15 0 chr10 68627457 68627523 -76961765 + (TA)n Simple_repeat Simple_repeat 1 67 0 341 248 53 30 chr10 68627523 68627656 -76961632 - L1ME3 LINE L1 -13 6149 6014 642 281 42 38 chr10 68627661 68627924 -76961364 - L1ME3 LINE L1 -219 5951 5688 322 281 0 22 chr10 68628302 68628391 -76960897 + LTR16B LTR ERVL 319 405 -59 599 324 103 3 chr10 68628438 68628759 -76960529 + HERV16 LTR ERVL 1 353 -4643 22 0 0 0 chr10 68629086 68629108 -76960180 + AT_rich Low_complexity Low_complexity 1 22 0 518 264 72 28 chr10 68629202 68629341 -76959947 - L1ME LINE L1 -853 5293 5162 1558 192 3 32 chr10 68629341 68629653 -76959635 + AluJb SINE Alu 1 303 -9 518 264 72 28 chr10 68629653 68629831 -76959457 - L1ME LINE L1 -984 5162 4962 2283 181 44 0 chr10 68629902 68630312 -76958976 + MSTA LTR MaLR 1 428 0 9643 158 15 9 chr10 68630316 68631953 -76957335 + MSTA-int LTR MaLR 5 1651 0 2305 138 83 0 chr10 68631953 68632337 -76956951 + MSTA LTR MaLR 1 416 -12 326 311 129 14 chr10 68632385 68632594 -76956694 - L1ME LINE L1 -1301 4845 4613 236 111 22 0 chr10 68633305 68633350 -76955938 + (TAGA)n Simple_repeat Simple_repeat 3 48 0 1705 191 61 6 chr10 68633352 68633697 -76955591 - MLT1A1 LTR MaLR -1 364 1 209 210 16 0 chr10 68633705 68633767 -76955521 + (TA)n Simple_repeat Simple_repeat 1 63 0 256 285 12 35 chr10 68633786 68633958 -76955330 - L1MC4 LINE L1 -146 7896 7729 1257 193 58 4 chr10 68634178 68634250 -76955038 + AluJo SINE Alu 47 114 -198 207 0 0 0 chr10 68634250 68634273 -76955015 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 1257 193 58 4 chr10 68634273 68634443 -76954845 + AluJo SINE Alu 114 302 -10 983 247 41 88 chr10 68634616 68635126 -76954162 - L1MC4 LINE L1 -396 7646 7161 832 154 0 15 chr10 68635126 68635262 -76954026 + AluJo SINE Alu 1 134 -178 484 246 72 10 chr10 68635272 68635479 -76953809 - L1MC4 LINE L1 -868 7174 6955 2107 128 14 0 chr10 68635601 68635897 -76953391 + AluSx SINE Alu 1 300 -12 761 263 81 101 chr10 68635941 68636723 -76952565 - LTR41 LTR ERVL -3 792 14 578 218 45 86 chr10 68636809 68637179 -76952109 - L1MC4 LINE L1 -743 5403 5181 318 253 1 2 chr10 68637522 68637611 -76951677 + L1M4 LINE L1 4735 4821 -1325 1318 255 134 27 chr10 68637701 68638193 -76951095 - MLT1H1 LTR MaLR -16 539 1 2195 114 7 0 chr10 68638249 68638557 -76950731 + AluY SINE Alu 1 310 -1 181 244 44 0 chr10 68639204 68639249 -76950039 - L2 LINE L2 -11 3302 3256 241 203 0 27 chr10 68642235 68642309 -76946979 + GA-rich Low_complexity Low_complexity 4 75 0 2205 111 0 0 chr10 68642415 68642704 -76946584 - AluSg SINE Alu -21 289 1 366 213 40 60 chr10 68642730 68642880 -76946408 + L1MD3 LINE L1 7840 7986 -9 210 267 0 27 chr10 68642935 68643010 -76946278 + (TATATG)n Simple_repeat Simple_repeat 5 77 0 276 183 17 0 chr10 68643024 68643084 -76946204 + HAL1 LINE L1 1100 1160 -1347 1650 255 95 48 chr10 68643339 68643991 -76945297 + L1MC4a LINE L1 6444 7126 -682 329 289 0 0 chr10 68644728 68644811 -76944477 - HERVL LTR ERVL -2440 3214 3132 181 336 92 42 chr10 68644863 68644982 -76944306 + L3 LINE CR1 984 1108 -469 368 271 37 0 chr10 68645029 68645136 -76944152 + L3 LINE CR1 1333 1443 -134 25 0 0 0 chr10 68645815 68645840 -76943448 + AT_rich Low_complexity Low_complexity 1 25 0 190 215 63 89 chr10 68646257 68646336 -76942952 + L3 LINE CR1 1501 1577 0 207 260 40 0 chr10 68646381 68646431 -76942857 - L2 LINE L2 -51 3221 3170 1013 253 33 3 chr10 68646713 68647013 -76942275 + L1ME3 LINE L1 5463 5771 -393 608 246 78 41 chr10 68647021 68647239 -76942049 + L1ME3 LINE L1 5877 6108 -54 2358 77 0 3 chr10 68647239 68647537 -76941751 - AluSx SINE Alu -14 298 2 608 246 78 41 chr10 68647537 68647586 -76941702 + L1ME3 LINE L1 6108 6154 -8 201 39 0 0 chr10 68647661 68647687 -76941601 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 181 266 16 31 chr10 68647715 68647779 -76941509 + MIR SINE MIR 110 172 -90 2380 113 65 32 chr10 68648281 68648751 -76940537 - Tigger4(Zombi) DNA MER2_type 0 2731 2175 1524 194 27 20 chr10 68648763 68649062 -76940226 - Tigger4(Zombi) DNA MER2_type -2430 301 1 1001 179 146 105 chr10 68649081 68649500 -76939788 - Zaphod DNA AcHobo 0 4031 3596 * 1804 215 86 23 chr10 68649499 68650160 -76939128 - Zaphod DNA AcHobo -3041 990 288 454 208 118 28 chr10 68650392 68650536 -76938752 - MER103 DNA DNA -9 157 1 1060 237 51 51 chr10 68650569 68650962 -76938326 + MSTD LTR MaLR 1 393 -3 2530 43 0 40 chr10 68651217 68651541 -76937747 + AluY SINE Alu 1 311 0 2155 130 0 7 chr10 68652131 68652439 -76936849 + AluSx SINE Alu 1 306 -6 1242 160 72 36 chr10 68653839 68654089 -76935199 + MER7A DNA MER2_type 2 258 -88 450 238 75 78 chr10 68654089 68654581 -76934707 - L1MDa LINE L1 -3697 2843 2359 1903 154 7 10 chr10 68654676 68654974 -76934314 - AluSx SINE Alu -15 297 1 292 302 50 28 chr10 68655434 68655613 -76933675 - HAL1b LINE L1 -714 634 452 361 326 54 61 chr10 68655614 68655704 -76933584 - HAL1b LINE L1 -1045 303 214 4271 168 65 49 chr10 68655704 68656758 -76932530 - MER11C LTR ERVK 0 1071 1 361 326 54 61 chr10 68656758 68656928 -76932360 - HAL1b LINE L1 -1134 214 45 670 308 4 34 chr10 68657952 68658057 -76931231 - MIR SINE MIR -4 258 151 1794 164 0 7 chr10 68658057 68658355 -76930933 - AluJb SINE Alu -16 296 1 670 308 4 34 chr10 68658355 68658515 -76930773 - MIR SINE MIR -111 151 1 187 296 11 68 chr10 68659639 68659727 -76929561 - MIR SINE MIR 0 262 180 1722 149 58 15 chr10 68659819 68660148 -76929140 + MER61A LTR ERV1 1 343 0 448 266 0 18 chr10 68662408 68662521 -76926767 + MIR3 SINE MIR 98 208 0 237 267 93 0 chr10 68664961 68665047 -76924241 - MLT1L LTR MaLR -520 95 2 258 219 14 0 chr10 68666548 68666621 -76922667 + (TA)n Simple_repeat Simple_repeat 2 75 0 188 119 0 24 chr10 68666773 68666815 -76922473 + (CAAT)n Simple_repeat Simple_repeat 3 43 0 257 295 39 13 chr10 68667085 68667163 -76922125 - L2 LINE L2 0 3272 3193 24 0 0 0 chr10 68667451 68667475 -76921813 + AT_rich Low_complexity Low_complexity 1 24 0 296 275 82 25 chr10 68669315 68669559 -76919729 + L1M4 LINE L1 2941 3198 -2948 841 276 91 0 chr10 68671235 68671543 -76917745 + MER46C DNA MER2_type 2 337 -1 249 32 0 0 chr10 68671579 68671610 -76917678 - L1MA9 LINE L1 0 6312 6282 1745 261 29 18 chr10 68671954 68672467 -76916821 - LTR40a LTR ERVL 0 519 1 948 226 81 0 chr10 68672467 68672702 -76916586 - HERVL40 LTR ERVL 0 5530 5277 224 254 155 0 chr10 68673542 68673613 -76915675 + L2 LINE L2 3220 3301 -12 273 364 72 24 chr10 68674058 68674267 -76915021 - LTR16A LTR ERVL 0 450 232 2319 99 0 3 chr10 68674466 68674778 -76914510 + AluSq SINE Alu 1 311 -2 181 347 102 27 chr10 68674817 68674964 -76914324 - L2 LINE L2 -797 2517 2360 236 281 0 0 chr10 68674978 68675035 -76914253 + L2 LINE L2 3183 3239 -33 21 82 0 0 chr10 68675466 68675515 -76913773 + AT_rich Low_complexity Low_complexity 1 49 0 422 388 6 6 chr10 68675572 68675732 -76913556 - MIR3 SINE MIR -48 160 1 1548 201 60 0 chr10 68676463 68676781 -76912507 - MER58B DNA MER1_type -4 337 1 234 150 0 0 chr10 68677826 68677866 -76911422 + (TA)n Simple_repeat Simple_repeat 2 41 0 * 366 143 0 0 chr10 68677859 68677922 -76911366 + (TG)n Simple_repeat Simple_repeat 2 64 0 491 161 143 81 chr10 68677927 68678017 -76911271 + MER21A LTR ERV1 28 111 -820 351 0 0 0 chr10 68678017 68678056 -76911232 + (TC)n Simple_repeat Simple_repeat 2 40 0 491 161 143 81 chr10 68678056 68678126 -76911162 + MER21A LTR ERV1 111 198 -733 238 159 136 0 chr10 68678106 68678150 -76911138 + MER39 LTR ERV1 264 313 -394 * 826 159 0 0 chr10 68678150 68678276 -76911012 + FLAM_C SINE Alu 1 126 -17 201 175 0 0 chr10 68678610 68678650 -76910638 + (CA)n Simple_repeat Simple_repeat 2 41 0 257 293 130 24 chr10 68682568 68682691 -76906597 + L2 LINE L2 3137 3272 0 372 253 207 0 chr10 68683377 68683527 -76905761 + MER5A DNA MER1_type 4 189 0 2167 122 15 0 chr10 68684863 68685199 -76904089 + L1PA14 LINE L1 5819 6159 -2 334 209 61 52 chr10 68686480 68686595 -76902693 + MLT1I LTR MaLR 245 360 -49 351 0 0 0 chr10 68686813 68686852 -76902436 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 1285 109 27 126 chr10 68686857 68687151 -76902137 - AluSx SINE Alu -47 265 1 21 36 0 0 chr10 68687301 68687329 -76901959 + AT_rich Low_complexity Low_complexity 1 28 0 409 344 33 48 chr10 68687419 68687873 -76901415 - L1MDa LINE L1 -2751 3789 3343 228 326 29 23 chr10 68687894 68688069 -76901219 - L1MDa LINE L1 -3222 3318 3143 2493 161 47 18 chr10 68688463 68688978 -76900310 - L1MA8 LINE L1 -4 6287 5758 273 233 10 0 chr10 68690311 68690377 -76898911 - L1MDa LINE L1 -962 1939 1782 464 116 0 14 chr10 68690378 68690447 -76898841 + Tigger2 DNA MER2_type 2 69 -2649 * 2650 130 25 25 chr10 68690437 68690883 -76898405 + Tigger2 DNA MER2_type 2273 2718 0 711 281 92 39 chr10 68690936 68691317 -76897971 + LTR68 LTR ERV1 36 436 -304 4628 178 45 20 chr10 68691636 68692078 -76897210 - L1MA9 LINE L1 -85 6227 5798 333 0 0 0 chr10 68692078 68692115 -76897173 + (TG)n Simple_repeat Simple_repeat 2 38 0 4628 178 45 20 chr10 68692115 68692819 -76896469 - L1MA9 LINE L1 -514 5798 5039 333 264 243 34 chr10 68697652 68697887 -76891401 + L2 LINE L2 2998 3281 -32 242 407 46 9 chr10 68700103 68700211 -76889077 + MIR3 SINE MIR 15 126 -82 385 275 48 30 chr10 68700231 68700398 -76888890 - MIR SINE MIR -3 259 90 444 195 0 0 chr10 68700406 68700483 -76888805 + L1PB4 LINE L1 6021 6097 -59 24 0 0 0 chr10 68700487 68700511 -76888777 + AT_rich Low_complexity Low_complexity 1 24 0 307 235 0 71 chr10 68700511 68700609 -76888679 + L1MC4 LINE L1 6613 6703 -1339 24 0 0 0 chr10 68700791 68700815 -76888473 + AT_rich Low_complexity Low_complexity 1 24 0 35 24 0 0 chr10 68701556 68701598 -76887690 + AT_rich Low_complexity Low_complexity 1 42 0 190 270 27 27 chr10 68702431 68702505 -76886783 + MIR SINE MIR 110 183 -79 580 315 94 9 chr10 68702605 68702818 -76886470 + MIR SINE MIR 16 246 -16 376 338 23 38 chr10 68702828 68702961 -76886327 + MIR3 SINE MIR 50 180 -28 213 344 99 23 chr10 68706201 68706332 -76882956 - L2 LINE L2 -16 3256 3116 466 232 27 36 chr10 68706408 68706520 -76882768 + L2 LINE L2 3185 3295 -18 1703 140 56 0 chr10 68706548 68706834 -76882454 + AluSx SINE Alu 1 302 -10 188 255 21 43 chr10 68706860 68706907 -76882381 - MIR SINE MIR -136 72 27 211 88 88 0 chr10 68706999 68707033 -76882255 + MIR SINE MIR 112 148 -114 21 0 0 0 chr10 68707551 68707572 -76881716 + AT_rich Low_complexity Low_complexity 1 21 0 428 317 61 26 chr10 68709887 68710117 -76879171 + MIR SINE MIR 11 248 -14 2133 126 84 0 chr10 68710229 68710563 -76878725 + THE1B LTR MaLR 1 362 -2 836 52 59 0 chr10 68711015 68711150 -76878138 + GA-rich Low_complexity Low_complexity 2 144 0 904 226 48 41 chr10 68711152 68711422 -76877866 + MLT1A1 LTR MaLR 94 365 0 220 212 144 53 chr10 68711805 68711937 -76877351 - L2 LINE L2 -56 3257 3114 841 278 55 68 chr10 68712159 68712559 -76876729 + MLT1K LTR MaLR 127 521 -67 215 348 34 0 chr10 68712738 68712827 -76876461 - MIR SINE MIR -121 141 50 215 241 15 15 chr10 68713270 68713403 -76875885 + (TA)n Simple_repeat Simple_repeat 2 134 0 362 355 7 7 chr10 68714284 68714436 -76874852 + MER5B DNA MER1_type 27 178 0 343 228 55 39 chr10 68715207 68715334 -76873954 + MARNA DNA Mariner 406 534 -52 359 270 118 25 chr10 68715485 68715800 -76873488 + L1ME4a LINE L1 5573 5916 -205 641 306 22 6 chr10 68715879 68716059 -76873229 - MIR SINE MIR -56 206 24 22 0 0 0 chr10 68716180 68716202 -76873086 + AT_rich Low_complexity Low_complexity 1 22 0 279 0 0 0 chr10 68716911 68716942 -76872346 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1716 156 7 0 chr10 68716944 68717213 -76872075 - AluJb SINE Alu -31 281 11 182 306 187 37 chr10 68718269 68718403 -76870885 + MIR3 SINE MIR 54 207 -1 1066 94 0 0 chr10 68718465 68718603 -76870685 - AluSg/x SINE Alu -9 303 166 708 265 5 25 chr10 68719391 68719587 -76869701 - L2 LINE L2 -4 3309 3118 2289 107 0 0 chr10 68719592 68719901 -76869387 + AluSg1 SINE Alu 1 309 0 192 278 294 16 chr10 68721140 68721327 -76867961 - L2 LINE L2 -637 2677 2439 39 38 0 0 chr10 68721480 68721533 -76867755 + AT_rich Low_complexity Low_complexity 1 53 0 25 0 0 0 chr10 68721686 68721711 -76867577 + AT_rich Low_complexity Low_complexity 1 25 0 262 361 68 0 chr10 68721748 68721881 -76867407 - MIR SINE MIR -60 202 61 22 0 0 0 chr10 68721881 68721903 -76867385 + AT_rich Low_complexity Low_complexity 1 22 0 577 146 41 0 chr10 68722001 68722113 -76867175 - L1M3 LINE L1 -714 5583 5485 4292 145 17 26 chr10 68722234 68722483 -76866805 + L1MC1 LINE L1 5577 5827 -506 2143 103 3 30 chr10 68722483 68722783 -76866505 + AluSx SINE Alu 1 292 -20 4292 145 17 26 chr10 68722783 68723297 -76865991 + L1MC1 LINE L1 5827 6333 0 2003 121 21 0 chr10 68723771 68724053 -76865235 - AluSq SINE Alu -25 288 1 23 33 0 0 chr10 68724220 68724250 -76865038 + AT_rich Low_complexity Low_complexity 1 30 0 892 303 78 23 chr10 68725580 68725979 -76863309 - LTR16A LTR ERVL -9 441 21 469 256 128 24 chr10 68726096 68726307 -76862981 - MIR SINE MIR -21 241 9 238 143 79 32 chr10 68726494 68726557 -76862731 - 7SK RNA RNA -79 114 49 248 216 0 0 chr10 68727387 68727438 -76861850 + L2 LINE L2 3263 3313 0 769 322 13 0 chr10 68728171 68728398 -76860890 + MIR SINE MIR 1 230 -32 1975 324 58 16 chr10 68728440 68729396 -76859892 - L2 LINE L2 -515 2799 1804 617 285 4 43 chr10 68729836 68730117 -76859171 - L2 LINE L2 -1562 1752 1483 32 43 0 0 chr10 68730959 68731005 -76858283 + AT_rich Low_complexity Low_complexity 1 46 0 309 286 0 22 chr10 68731191 68731282 -76858006 - MIR SINE MIR -126 136 48 2418 97 0 0 chr10 68731868 68732167 -76857121 - AluSx SINE Alu -13 299 1 275 274 77 26 chr10 68732247 68732454 -76856834 - MLT1I LTR MaLR -23 386 135 4433 154 13 21 chr10 68732495 68733315 -76855973 - L1PB4 LINE L1 -25 6131 5318 1337 182 46 13 chr10 68733320 68733622 -76855666 - L1MB8 LINE L1 -6 6172 5861 398 129 22 5 chr10 68733633 68733718 -76855570 - L1PB4 LINE L1 0 6156 6066 308 345 17 0 chr10 68733762 68733881 -76855407 - MLT1I LTR MaLR -275 134 14 236 281 16 31 chr10 68734545 68734609 -76854679 + MIR3 SINE MIR 6 68 -140 246 81 0 0 chr10 68734785 68734822 -76854466 + (ATG)n Simple_repeat Simple_repeat 2 38 0 2232 110 0 0 chr10 68735353 68735645 -76853643 + AluSc SINE Alu 1 292 -17 627 41 10 21 chr10 68735728 68735825 -76853463 + (TTATA)n Simple_repeat Simple_repeat 5 100 0 208 123 88 0 chr10 68736106 68736163 -76853125 + (TA)n Simple_repeat Simple_repeat 2 63 0 201 184 81 0 chr10 68736658 68736745 -76852543 + (TA)n Simple_repeat Simple_repeat 2 95 0 931 252 150 37 chr10 68737234 68737725 -76851563 + MLT1F LTR MaLR 1 593 0 1642 142 14 3 chr10 68737798 68738087 -76851201 + L1MA9 LINE L1 6021 6312 0 1828 164 10 16 chr10 68738140 68738450 -76850838 + AluJo SINE Alu 3 310 -2 22 0 0 0 chr10 68738451 68738473 -76850815 + AT_rich Low_complexity Low_complexity 1 22 0 215 93 23 0 chr10 68739046 68739089 -76850199 + (TTTTG)n Simple_repeat Simple_repeat 3 46 0 357 216 14 0 chr10 68739178 68739252 -76850036 - MER46C DNA MER2_type -21 317 243 304 339 107 8 chr10 68739368 68739489 -76849799 - MIR SINE MIR -128 134 2 351 0 0 0 chr10 68739513 68739552 -76849736 + (TG)n Simple_repeat Simple_repeat 2 40 0 1994 129 26 14 chr10 68739854 68740203 -76849085 + L1MA8 LINE L1 5939 6291 0 192 310 113 28 chr10 68741737 68741879 -76847409 + L2 LINE L2 3160 3313 0 198 333 75 50 chr10 68742453 68742573 -76846715 + L2 LINE L2 3137 3259 -13 288 263 84 137 chr10 68742759 68742811 -76846477 - MIR SINE MIR -71 191 138 2186 118 16 0 chr10 68742811 68743117 -76846171 - AluSx SINE Alu -1 311 1 288 263 84 137 chr10 68743117 68743254 -76846034 - MIR SINE MIR -124 138 12 717 313 148 8 chr10 68744616 68745009 -76844279 - LTR16C LTR ERVL 0 491 44 947 289 88 0 chr10 68745026 68745310 -76843978 + LTR16C LTR ERVL 169 477 -14 505 214 8 34 chr10 68745927 68746044 -76843244 - MER81 DNA DNA 0 114 1 3120 168 4 0 chr10 68846696 68847250 -76742038 - L1P LINE L1 -1352 4794 4239 4138 232 14 3 chr10 68847939 68848983 -76740305 + L1 LINE L1 4233 5288 -858 1796 205 42 19 chr10 68849299 68849723 -76739565 + MLT1C LTR MaLR 1 434 -33 21 0 0 0 chr10 68850068 68850089 -76739199 + GC_rich Low_complexity Low_complexity 1 21 0 1088 270 77 66 chr10 68850504 68851140 -76738148 + L1ME1 LINE L1 5501 6143 -23 380 229 6 112 chr10 68851004 68851183 -76738105 + L1MA10 LINE L1 6175 6334 0 * 310 306 134 11 chr10 68851869 68852055 -76737233 + L1ME2 LINE L1 1192 1400 -4996 623 165 26 0 chr10 68852057 68852172 -76737116 + FAM SINE Alu 35 152 -33 680 279 35 35 chr10 68852188 68852520 -76736768 + L1ME2 LINE L1 1385 1719 -4677 195 42 0 0 chr10 68852520 68852544 -76736744 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 680 279 35 35 chr10 68852544 68852580 -76736708 + L1ME2 LINE L1 1718 1753 -4643 2126 280 60 38 chr10 68852698 68854098 -76735190 + L1ME2 LINE L1 2063 3453 -2762 405 254 63 11 chr10 68854117 68854306 -76734982 + L1ME2 LINE L1 5199 5397 -818 368 276 35 9 chr10 68854304 68854538 -76734750 + L1ME2 LINE L1 5784 6067 -166 * 875 164 22 38 chr10 68854601 68854784 -76734504 + L1MC1 LINE L1 5908 6087 -246 1165 198 5 0 chr10 68854838 68855045 -76734243 + L1MC1 LINE L1 6081 6288 -45 1946 39 0 0 chr10 68855762 68855996 -76733292 + L1PA4 LINE L1 5911 6144 -11 519 268 81 20 chr10 68856441 68856639 -76732649 + LTR33 LTR ERVL 5 214 -307 390 284 142 0 chr10 68856668 68856858 -76732430 + LTR33 LTR ERVL 305 521 0 650 296 28 16 chr10 68858407 68858660 -76730628 - MIR SINE MIR 0 262 7 563 351 22 9 chr10 68859371 68859593 -76729695 + MIR SINE MIR 33 257 -5 32 0 0 0 chr10 68859757 68859789 -76729499 + AT_rich Low_complexity Low_complexity 1 32 0 352 325 46 16 chr10 68860675 68860869 -76728419 + MLT1L LTR MaLR 360 559 -56 842 167 0 0 chr10 68861209 68861341 -76727947 + FLAM_C SINE Alu 1 132 -11 21 71 0 0 chr10 68861859 68861901 -76727387 + AT_rich Low_complexity Low_complexity 1 42 0 859 284 93 25 chr10 68862527 68862883 -76726405 + L2 LINE L2 2934 3313 0 337 360 22 33 chr10 68865114 68865389 -76723899 + L1ME LINE L1 10 281 -5789 492 327 73 14 chr10 68865792 68866147 -76723141 + L1ME LINE L1 520 895 -5175 3839 128 10 10 chr10 68866147 68866261 -76723027 - Tigger1 DNA MER2_type -218 2200 2087 2115 120 0 52 chr10 68866261 68866437 -76722851 - AluSx SINE Alu -3 309 156 2345 70 0 3 chr10 68866437 68866771 -76722517 - AluY SINE Alu 0 311 1 2115 120 0 52 chr10 68866771 68866920 -76722368 - AluSx SINE Alu -156 156 1 3839 128 10 10 chr10 68866920 68867409 -76721879 - Tigger1 DNA MER2_type -330 2088 1597 394 66 33 0 chr10 68867393 68867454 -76721834 - Tigger1 DNA MER2_type -1733 685 623 * 268 49 16 115 chr10 68867808 68867869 -76721419 + HSMAR1 DNA Mariner 1 55 -1232 472 147 29 0 chr10 68868073 68868175 -76721113 + A-rich Low_complexity Low_complexity 3 107 0 1987 121 0 14 chr10 68869541 68869823 -76719465 - AluSx SINE Alu -31 281 4 2052 97 28 16 chr10 68871529 68871924 -76717364 + LTR7 LTR ERV1 1 450 0 2786 0 0 0 chr10 68873748 68874045 -76715243 - AluYa5 SINE Alu -14 297 1 183 313 88 12 chr10 68875085 68875165 -76714123 + L2 LINE L2 3182 3267 -5 210 266 47 47 chr10 68875198 68875262 -76714026 - L2 LINE L2 0 3272 3209 503 222 52 0 chr10 68875276 68875411 -76713877 - MER31-int LTR ERV1 -823 4113 3972 873 63 0 2 chr10 68875411 68875536 -76713752 - L1PA7 LINE L1 -169 5986 5864 493 58 0 46 chr10 68875534 68875621 -76713667 + L1PA7 LINE L1 5982 6064 -90 * 1640 213 63 82 chr10 68875672 68875760 -76713528 - MER31-int LTR ERV1 -1040 5094 5006 4428 46 2 0 chr10 68875760 68876301 -76712987 + L1PA7 LINE L1 5607 6148 -6 1640 213 63 82 chr10 68876301 68876976 -76712312 - MER31-int LTR ERV1 -1128 5006 3330 21 36 0 0 chr10 68877094 68877122 -76712166 + AT_rich Low_complexity Low_complexity 1 28 0 205 274 14 82 chr10 68877297 68877370 -76711918 - MER5A DNA MER1_type -87 102 35 1933 249 60 62 chr10 68877521 68878838 -76710450 - MER31-int LTR ERV1 -1870 3066 1709 1995 91 0 8 chr10 68878839 68879104 -76710184 + AluSg SINE Alu 47 309 -1 416 217 25 64 chr10 68879285 68879333 -76709955 - MER31-int LTR ERV1 -3500 1436 1388 2265 110 0 0 chr10 68879333 68879634 -76709654 - AluSc SINE Alu -7 302 2 416 217 25 64 chr10 68879634 68879742 -76709546 - MER31-int LTR ERV1 -3548 1388 1286 615 258 74 11 chr10 68879756 68879933 -76709355 - MER31-int LTR ERV1 -3621 1315 1114 1741 138 85 6 chr10 68879933 68880251 -76709037 - MER2 DNA MER2_type -1 343 1 615 258 74 11 chr10 68880251 68880344 -76708944 - MER31-int LTR ERV1 -3822 1114 1028 1366 256 109 42 chr10 68880755 68880966 -76708322 - MER92C LTR ERV1 -3 551 355 1933 207 61 35 chr10 68880966 68881458 -76707830 - MLT1D LTR MaLR 0 505 1 1366 256 109 42 chr10 68881458 68881742 -76707546 - MER92C LTR ERV1 -199 355 23 709 316 26 13 chr10 68881836 68882067 -76707221 + MIR SINE MIR 29 262 0 1380 125 0 5 chr10 68882264 68882456 -76706832 - AluSx SINE Alu -121 191 1 1611 109 44 4 chr10 68882768 68883016 -76706272 - Tigger2 DNA MER2_type 0 2718 2461 4153 172 12 3 chr10 68883084 68883822 -76705466 - Tigger2 DNA MER2_type -1972 746 2 22 56 0 0 chr10 68884875 68884911 -76704377 + AT_rich Low_complexity Low_complexity 1 36 0 1336 181 4 44 chr10 68885113 68885362 -76703926 - MER8 DNA MER2_type 0 239 1 180 0 0 0 chr10 68885600 68885620 -76703668 + (TG)n Simple_repeat Simple_repeat 1 20 0 633 257 149 12 chr10 68886017 68886258 -76703030 - L1MEd LINE L1 -5840 279 6 202 271 34 17 chr10 68886261 68886320 -76702968 + L2 LINE L2 1923 1982 -1332 855 337 119 11 chr10 68886373 68886942 -76702346 + L2 LINE L2 2019 2649 -665 27 0 0 0 chr10 68887122 68887149 -76702139 + AT_rich Low_complexity Low_complexity 1 27 0 2146 163 36 5 chr10 68887883 68888410 -76700878 + LTR69 LTR ERVL 1 584 -4 299 326 65 36 chr10 68890322 68890460 -76698828 + MIR SINE MIR 5 146 -116 406 232 9 18 chr10 68890488 68890600 -76698688 - L1MA10 LINE L1 -2 6332 6222 257 315 43 0 chr10 68890728 68890820 -76698468 + L2 LINE L2 1859 1954 -1360 277 330 67 74 chr10 68890990 68891798 -76697490 - L2 LINE L2 -50 3222 2390 198 373 53 0 chr10 68892429 68892504 -76696784 + MIR SINE MIR 59 137 -71 2445 70 0 3 chr10 68892630 68892942 -76696346 + AluY SINE Alu 1 311 0 2053 136 108 8 chr10 68893022 68893411 -76695877 + MSTA LTR MaLR 1 428 0 418 286 46 42 chr10 68894644 68894903 -76694385 + MIR SINE MIR 3 262 0 411 21 0 0 chr10 68895125 68895173 -76694115 + (TG)n Simple_repeat Simple_repeat 2 49 0 27 49 0 0 chr10 68895972 68896013 -76693275 + AT_rich Low_complexity Low_complexity 1 41 0 508 324 25 42 chr10 68896710 68896951 -76692337 - L2 LINE L2 -782 2532 2296 207 69 0 0 chr10 68896955 68896984 -76692304 + (TCTCTG)n Simple_repeat Simple_repeat 2 30 0 379 279 66 46 chr10 68897058 68897255 -76692033 + MIR SINE MIR 50 250 -12 315 325 90 77 chr10 68898319 68898707 -76690581 - L1ME4a LINE L1 -11 6110 5718 2379 67 3 3 chr10 68898716 68899013 -76690275 - AluY SINE Alu -14 297 1 763 169 0 29 chr10 68899080 68899216 -76690072 - AluJo SINE Alu -178 134 3 229 333 90 0 chr10 68900193 68900304 -76688984 + MIR SINE MIR 20 140 -68 1728 207 131 67 chr10 68900364 68901046 -76688242 - MER50 LTR ERV1 0 734 10 213 321 0 0 chr10 68901176 68901229 -76688059 - MIR SINE MIR -66 142 90 800 307 44 7 chr10 68903579 68903853 -76685435 + LTR33 LTR ERVL 1 284 -237 1571 215 61 41 chr10 68904308 68904749 -76684539 - MLT1C LTR MaLR -10 457 8 1262 160 27 57 chr10 68904964 68905227 -76684061 + L1MA9 LINE L1 5537 5791 -521 435 197 13 0 chr10 68905274 68905350 -76683938 + Tigger3b DNA MER2_type 1 77 -1154 * 5813 123 37 6 chr10 68905343 68906309 -76682979 + Tigger3b DNA MER2_type 230 1225 -6 2632 165 50 0 chr10 68906313 68906817 -76682471 + L1MA9 LINE L1 5784 6312 0 29 0 0 0 chr10 68907200 68907229 -76682059 + AT_rich Low_complexity Low_complexity 1 29 0 27 0 0 0 chr10 68907580 68907607 -76681681 + AT_rich Low_complexity Low_complexity 1 27 0 340 309 83 39 chr10 68907656 68907837 -76681451 - MIR SINE MIR -20 242 54 2852 197 87 50 chr10 68908072 68908836 -76680452 + L1MA9 LINE L1 5262 6059 -253 2277 114 0 16 chr10 68908836 68909151 -76680137 + AluSx SINE Alu 1 310 -2 2852 197 87 50 chr10 68909151 68909205 -76680083 + L1MA9 LINE L1 6059 6110 -202 3551 119 3 42 chr10 68909207 68909804 -76679484 + MER4B LTR ERV1 1 574 -36 699 224 62 0 chr10 68909838 68910030 -76679258 + L1MA10 LINE L1 6112 6315 -19 26 30 0 0 chr10 68910641 68910674 -76678614 + AT_rich Low_complexity Low_complexity 1 33 0 311 310 31 54 chr10 68911890 68912019 -76677269 + L2 LINE L2 3188 3313 0 757 230 12 12 chr10 68913170 68913335 -76675953 + FRAM SINE Alu 2 166 0 22 70 0 0 chr10 68913609 68913652 -76675636 + AT_rich Low_complexity Low_complexity 1 43 0 1827 124 52 7 chr10 68915548 68915838 -76673450 - AluSx SINE Alu -9 303 1 297 334 65 76 chr10 68916073 68916429 -76672859 + L2 LINE L2 1366 1717 -1597 1847 165 38 105 chr10 68916766 68916883 -76672405 - Tigger1 DNA MER2_type -1998 420 297 1779 152 40 17 chr10 68916883 68917185 -76672103 + AluSx SINE Alu 1 309 -3 1847 165 38 105 chr10 68917185 68917460 -76671828 - Tigger1 DNA MER2_type -2121 297 59 2302 103 0 0 chr10 68917460 68917762 -76671526 + AluSp SINE Alu 1 302 -11 1847 165 38 105 chr10 68917762 68917817 -76671471 - Tigger1 DNA MER2_type -2359 59 2 2397 49 0 0 chr10 68918819 68919104 -76670184 - AluY SINE Alu -26 285 1 209 146 0 49 chr10 68919105 68919146 -76670142 - L2 LINE L2 -13 3300 3262 21 0 0 0 chr10 68919328 68919349 -76669939 + AT_rich Low_complexity Low_complexity 1 21 0 230 320 80 0 chr10 68920825 68920925 -76668363 - MIR3 SINE MIR -1 207 100 23 0 0 0 chr10 68920952 68920975 -76668313 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr10 68921782 68921805 -76667483 + AT_rich Low_complexity Low_complexity 1 23 0 698 227 0 26 chr10 68922095 68922249 -76667039 + FRAM SINE Alu 20 169 -7 895 190 6 0 chr10 68922625 68922788 -76666500 + L1M3 LINE L1 5538 5701 -479 225 0 0 0 chr10 68923411 68923436 -76665852 + (CA)n Simple_repeat Simple_repeat 2 26 0 2099 264 26 40 chr10 68923780 68924539 -76664749 + L1M4 LINE L1 3283 4031 -2115 388 275 95 26 chr10 68924824 68925013 -76664275 + L1M4 LINE L1 5261 5462 -716 223 182 0 0 chr10 68925131 68925175 -76664113 + A-rich Low_complexity Low_complexity 2 45 0 1873 143 36 0 chr10 68925440 68925741 -76663547 - AluSx SINE Alu 0 312 1 232 379 56 30 chr10 68928038 68928236 -76661052 - MIR SINE MIR -28 234 32 821 203 0 0 chr10 68928424 68928596 -76660692 - AluJb SINE Alu 0 306 135 189 175 0 0 chr10 68928599 68928639 -76660649 + A-rich Low_complexity Low_complexity 1 40 0 6375 139 47 7 chr10 68928752 68929849 -76659439 - Tigger3b DNA MER2_type 0 1231 91 1726 209 137 87 chr10 68929868 68930683 -76658605 - LTR1B LTR ERV1 0 1020 1 526 215 0 0 chr10 68930684 68930777 -76658511 - Tigger3b DNA MER2_type -1138 93 1 369 0 0 0 chr10 68930820 68930861 -76658427 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 25 0 0 0 chr10 68931178 68931203 -76658085 + AT_rich Low_complexity Low_complexity 1 25 0 241 372 91 33 chr10 68931232 68931506 -76657782 - L2 LINE L2 -172 3100 2811 241 366 84 14 chr10 68932463 68932605 -76656683 + MIR SINE MIR 36 187 -75 231 156 44 0 chr10 68932605 68932650 -76656638 - Tigger1 DNA MER2_type -1213 1205 1159 25 0 0 0 chr10 68932891 68932916 -76656372 + AT_rich Low_complexity Low_complexity 1 25 0 25 31 0 0 chr10 68932944 68932976 -76656312 + AT_rich Low_complexity Low_complexity 1 32 0 289 296 50 20 chr10 68933164 68933363 -76655925 - L1MC/D LINE L1 -2346 5462 5258 269 287 44 88 chr10 68934167 68934303 -76654985 + MIR3 SINE MIR 13 142 -66 2362 222 44 41 chr10 68934480 68935141 -76654147 - L1ME2 LINE L1 -38 6195 5533 983 261 128 55 chr10 68935185 68936302 -76652986 - L1ME2 LINE L1 -1604 4611 3414 725 252 58 107 chr10 68936330 68936554 -76652734 - L1ME2 LINE L1 -4333 2063 1830 2335 100 0 0 chr10 68936554 68936863 -76652425 + AluSg SINE Alu 1 309 -1 725 252 58 107 chr10 68936863 68937206 -76652082 - L1ME2 LINE L1 -4566 1830 1524 1034 247 49 98 chr10 68937284 68937815 -76651473 - MLT1D LTR MaLR 0 505 1 2077 164 44 36 chr10 68937817 68938294 -76650994 - L1MDa LINE L1 -4214 2326 1846 3004 201 137 171 chr10 68938954 68939632 -76649656 - L1MDa LINE L1 -4710 1830 1130 777 224 55 55 chr10 68939632 68939706 -76649582 + MLT1D LTR MaLR 1 74 -431 258 32 0 0 chr10 68939706 68939737 -76649551 + (CA)n Simple_repeat Simple_repeat 2 32 0 777 224 55 55 chr10 68939737 68939899 -76649389 + MLT1D LTR MaLR 73 237 -268 3004 201 137 171 chr10 68939899 68940879 -76648409 - L1MDa LINE L1 -5410 1130 1 2098 119 0 10 chr10 68941220 68941546 -76647742 + AluSx SINE Alu 1 312 0 399 312 23 17 chr10 68941621 68941794 -76647494 - MIR SINE MIR 0 262 89 419 216 74 47 chr10 68943417 68943565 -76645723 - MER97b DNA MER1_type? -874 179 28 366 285 73 22 chr10 68943751 68943888 -76645400 - MLT2E LTR ERVL -453 175 32 965 165 176 84 chr10 68944072 68944345 -76644943 + AluJo SINE Alu 1 298 -14 203 296 0 0 chr10 68944447 68944501 -76644787 + CT-rich Low_complexity Low_complexity 6 59 0 453 341 77 47 chr10 68944777 68945310 -76643978 - L1MD2 LINE L1 -530 5829 5281 1882 189 85 16 chr10 68945327 68945761 -76643527 + MLT1C LTR MaLR 4 467 0 21 57 0 0 chr10 68945883 68945918 -76643370 + AT_rich Low_complexity Low_complexity 1 35 0 2206 106 0 3 chr10 68945982 68946283 -76643005 - AluSg1 SINE Alu -9 300 1 232 283 50 44 chr10 68946414 68946573 -76642715 - L1MD2 LINE L1 -1500 4646 4487 288 213 0 25 chr10 68946774 68946854 -76642434 + (TA)n Simple_repeat Simple_repeat 1 78 0 639 335 52 7 chr10 68947035 68947342 -76641946 + LTR16C LTR ERVL 171 491 0 470 324 22 27 chr10 68948026 68948248 -76641040 - HAL1b LINE L1 -756 592 372 249 269 45 0 chr10 68949107 68949174 -76640114 + MIR3 SINE MIR 91 160 -48 653 88 10 0 chr10 68949423 68949525 -76639763 + (GGAA)n Simple_repeat Simple_repeat 4 106 0 1618 200 0 13 chr10 68951466 68951771 -76637517 - AluJo SINE Alu -11 301 1 236 348 0 0 chr10 68953002 68953084 -76636204 + MLT1H1 LTR MaLR 23 136 -419 459 275 135 21 chr10 68953270 68953463 -76635825 + MLT1H1 LTR MaLR 322 536 -19 343 197 0 0 chr10 68953684 68953755 -76635533 - L1MB4 LINE L1 -3 6177 6107 * 792 177 191 20 chr10 68953724 68953968 -76635320 - L1MB5 LINE L1 -36 6138 5839 1638 235 88 5 chr10 68954256 68954677 -76634611 + MLT2B1 LTR ERVL 1 456 -64 248 145 0 87 chr10 68954708 68954777 -76634511 - L1MC4 LINE L1 -1339 6703 6641 285 95 24 0 chr10 68954788 68954830 -76634458 + MLT2B1 LTR ERVL 478 520 0 270 202 0 45 chr10 68956743 68956832 -76632456 + (TATAA)n Simple_repeat Simple_repeat 3 87 0 192 77 0 0 chr10 68957491 68957517 -76631771 + (TAAAA)n Simple_repeat Simple_repeat 3 28 0 411 328 46 21 chr10 68958393 68958595 -76630693 + MLT1H LTR MaLR 64 309 -240 1523 301 83 14 chr10 68958714 68959757 -76629531 + L1MEc LINE L1 1046 2160 -4236 1372 178 12 0 chr10 68959771 68960018 -76629270 + L1PB4 LINE L1 5907 6156 0 405 243 108 45 chr10 68960025 68960136 -76629152 - L2 LINE L2 -24 3289 3172 2052 128 3 0 chr10 68960820 68961118 -76628170 + AluSx SINE Alu 1 299 -13 29 47 0 0 chr10 68961128 68961171 -76628117 + AT_rich Low_complexity Low_complexity 1 43 0 502 176 24 0 chr10 68961315 68961400 -76627888 + MER70A LTR ERVL 386 472 0 4521 179 36 26 chr10 68961409 68962556 -76626732 + L1M2 LINE L1 4336 5501 -772 400 260 87 7 chr10 68962605 68962755 -76626533 - LTR50 LTR ERVL -154 641 480 477 268 167 0 chr10 68962873 68963041 -76626247 - LTR50 LTR ERVL -593 202 7 1827 242 47 40 chr10 68963433 68963939 -76625349 - MLT2B1 LTR ERVL 0 486 59 1502 143 0 4 chr10 68963939 68964170 -76625118 + AluSg/x SINE Alu 69 298 -12 1827 242 47 40 chr10 68964170 68964230 -76625058 - MLT2B1 LTR ERVL -427 59 1 1392 252 116 34 chr10 68965836 68966644 -76622644 - L1MCa LINE L1 -3215 3211 2328 516 283 78 31 chr10 68966739 68967124 -76622164 - L1MCa LINE L1 -5151 1265 863 255 389 47 0 chr10 68967573 68967722 -76621566 - L1MCa LINE L1 -6051 556 401 1023 222 0 30 chr10 68969249 68969479 -76619809 - MER58A DNA MER1_type -1 223 1 180 0 0 0 chr10 68969732 68969752 -76619536 + (TTTG)n Simple_repeat Simple_repeat 3 22 0 1436 165 4 50 chr10 68969758 68970019 -76619269 - AluJo SINE Alu -30 282 34 22 35 0 0 chr10 68970860 68970889 -76618399 + AT_rich Low_complexity Low_complexity 1 29 0 671 325 94 40 chr10 68971212 68971636 -76617652 - LTR16B LTR ERVL -15 449 3 25 53 0 18 chr10 68971714 68971745 -76617543 + AT_rich Low_complexity Low_complexity 1 32 -24 1513 225 3 0 chr10 68971745 68972034 -76617254 + AluJb SINE Alu 1 290 -22 25 53 0 18 chr10 68972034 68972059 -76617229 + AT_rich Low_complexity Low_complexity 32 56 0 676 337 29 8 chr10 68972346 68972592 -76616696 + MIR SINE MIR 11 261 -1 236 314 81 16 chr10 68973202 68973326 -76615962 - L2 LINE L2 0 3313 3182 6035 156 14 14 chr10 68973678 68974782 -76614506 - L1P LINE L1 -2784 3362 2259 12201 130 8 1 chr10 68974782 68977491 -76611797 + L1PA10 LINE L1 3434 6155 -13 291 279 36 45 chr10 68977781 68977892 -76611396 - L2 LINE L2 -867 2447 2338 1584 145 119 0 chr10 68978843 68979112 -76610176 + AluSq SINE Alu 1 301 -12 513 307 26 8 chr10 68979843 68979976 -76609312 + L1MD3 LINE L1 7722 7851 -144 7195 50 0 3 chr10 68979976 68981040 -76608248 - L1PA5 LINE L1 -4 6150 5090 513 307 26 8 chr10 68981040 68981173 -76608115 + L1MD3 LINE L1 7851 7993 -2 399 281 47 0 chr10 68981236 68981364 -76607924 + LTR16A LTR ERVL 30 163 -287 7195 179 153 26 chr10 68981366 68982924 -76606364 - MER52A LTR ERV1 0 1755 1 280 296 114 8 chr10 68983034 68983166 -76606122 + LTR16A LTR ERVL 290 435 -15 252 254 14 0 chr10 68984058 68984129 -76605159 - L1ME3A LINE L1 -78 6092 6021 666 121 0 0 chr10 68984134 68984233 -76605055 - FRAM SINE Alu -38 138 40 673 229 0 8 chr10 68984241 68984372 -76604916 - FLAM_A SINE Alu -3 130 1 454 145 0 0 chr10 68984372 68984441 -76604847 + MLT1D LTR MaLR 437 505 0 264 299 97 44 chr10 68984528 68984795 -76604493 - L2 LINE L2 -314 2999 2720 190 380 62 0 chr10 68985037 68985166 -76604122 + L2 LINE L2 2619 2755 -559 349 150 0 192 chr10 68985197 68985317 -76603971 + MER96B DNA MER1_type? 4 100 -317 3226 213 43 11 chr10 68985317 68986021 -76603267 - L1MB7 LINE L1 -12 6172 5447 364 210 74 0 chr10 68986022 68986103 -76603185 - Tigger5 DNA MER2_type 0 2323 2237 397 217 60 0 chr10 68986111 68986194 -76603094 + Tigger5 DNA MER2_type 1 88 -2235 230 254 0 17 chr10 68986212 68986271 -76603017 - Tigger5 DNA MER2_type -1 2322 2265 815 181 12 0 chr10 68986323 68986532 -76602756 - L1MB7 LINE L1 -742 5436 5225 22 0 0 0 chr10 68986597 68986619 -76602669 + AT_rich Low_complexity Low_complexity 1 22 0 1051 178 42 17 chr10 68986620 68986861 -76602427 - L1MA9 LINE L1 -7 6305 6059 2349 98 3 0 chr10 68986888 68987195 -76602093 + AluSp SINE Alu 1 308 -5 402 312 100 13 chr10 68987812 68988152 -76601136 + MLT1J2 LTR MaLR 49 443 -7 371 363 56 13 chr10 68988153 68988387 -76600901 + ERVL LTR ERVL 2237 2480 -3284 2093 142 51 17 chr10 68988417 68988769 -76600519 - THE1B LTR MaLR 0 364 1 206 103 0 26 chr10 68989021 68989060 -76600228 + (TAA)n Simple_repeat Simple_repeat 3 40 0 657 269 118 35 chr10 68990057 68990454 -76598834 + MER57B LTR ERV1 1 430 -4 338 231 188 0 chr10 68990557 68990674 -76598614 + MER103 DNA DNA 20 158 -8 1906 158 7 0 chr10 68991005 68991296 -76597992 + AluSx SINE Alu 1 293 -19 28512 131 12 57 chr10 68991308 68991689 -76597599 + L1PA8 LINE L1 12 409 -5763 397 0 19 19 chr10 68991689 68991743 -76597545 + (TTG)n Simple_repeat Simple_repeat 2 55 0 28512 131 12 57 chr10 68991743 68995283 -76594005 + L1PA8 LINE L1 409 3521 -2651 2257 110 0 3 chr10 68995283 68995582 -76593706 - AluSx SINE Alu -14 298 1 28512 131 12 57 chr10 68995582 68998119 -76591169 + L1PA8 LINE L1 3521 6170 -2 526 325 12 6 chr10 68998825 68998991 -76590297 + MER5B DNA MER1_type 12 178 0 226 289 177 33 chr10 68999051 68999183 -76590105 + MER5B DNA MER1_type 12 189 0 245 369 0 12 chr10 68999359 68999443 -76589845 + MIR SINE MIR 33 115 -93 219 329 35 25 chr10 68999929 69000079 -76589209 + MIR SINE MIR 16 164 -71 335 261 7 123 chr10 69000209 69000347 -76588941 - L2 LINE L2 0 3272 3151 347 337 70 61 chr10 69000499 69000978 -76588310 - L2 LINE L2 -238 3034 2550 216 270 135 0 chr10 69000996 69001070 -76588218 + L2 LINE L2 3171 3254 -18 294 298 91 8 chr10 69001081 69001202 -76588086 - L3 LINE CR1 -154 1423 1293 306 0 0 0 chr10 69001211 69001245 -76588043 + (CA)n Simple_repeat Simple_repeat 2 35 0 326 130 0 0 chr10 69001330 69001384 -76587904 + MLT2B1 LTR ERVL 467 520 0 277 345 21 14 chr10 69001489 69001634 -76587654 - MIR SINE MIR -38 224 79 1983 168 69 24 chr10 69001985 69002519 -76586769 - MLT2A2 LTR ERVL 0 554 1 606 311 129 56 chr10 69002593 69003353 -76585935 - L2 LINE L2 -256 3057 2246 243 88 0 0 chr10 69004637 69004671 -76584617 + (A)n Simple_repeat Simple_repeat 1 34 0 293 137 40 40 chr10 69005328 69005503 -76583785 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 * 531 98 92 0 chr10 69005466 69005629 -76583659 + (TA)n Simple_repeat Simple_repeat 2 179 0 379 161 33 44 chr10 69005675 69005855 -76583433 + (CATA)n Simple_repeat Simple_repeat 3 180 0 * 623 105 80 0 chr10 69005824 69006156 -76583132 + (TA)n Simple_repeat Simple_repeat 1 358 0 529 288 8 0 chr10 69006554 69006672 -76582616 - MER5B DNA MER1_type -59 119 1 349 326 150 33 chr10 69006733 69007212 -76582076 - L2 LINE L2 -739 2575 2041 3207 244 40 60 chr10 69007562 69007747 -76581541 - L1ME LINE L1 -679 5727 5540 2138 54 0 4 chr10 69007747 69008007 -76581281 - AluY SINE Alu -7 304 46 3207 244 40 60 chr10 69008007 69008136 -76581152 - L1ME LINE L1 -866 5540 5410 3837 9 0 0 chr10 69008136 69008570 -76580718 + L1PA2 LINE L1 5719 6152 -3 3207 244 40 60 chr10 69008570 69009768 -76579520 - L1ME LINE L1 -996 5410 4261 2089 138 39 30 chr10 69009768 69010129 -76579159 - THE1B LTR MaLR 0 364 1 3207 244 40 60 chr10 69010129 69010289 -76578999 - L1ME LINE L1 -2145 4261 4099 27 29 0 0 chr10 69010343 69010377 -76578911 + AT_rich Low_complexity Low_complexity 1 34 0 9400 191 43 13 chr10 69010377 69012618 -76576670 - L1MA4 LINE L1 -11 6471 4109 1533 193 56 0 chr10 69012618 69012910 -76576378 - AluJb SINE Alu 0 307 1 9400 191 43 13 chr10 69012910 69013736 -76575552 - L1MA4 LINE L1 -2373 4109 3310 4601 169 44 3 chr10 69013734 69014811 -76574477 - L1MA4 LINE L1 -4071 1257 1 * 737 304 35 5 chr10 69014811 69015179 -76574109 - L1ME LINE L1 -2293 4089 3711 343 310 109 18 chr10 69015250 69015524 -76573764 - L1ME LINE L1 -4950 1434 1280 235 328 61 8 chr10 69015721 69015852 -76573436 - L2 LINE L2 -4 3309 3172 1228 249 88 41 chr10 69015904 69016411 -76572877 + MLT1E3 LTR MaLR 95 619 -5 2271 83 4 0 chr10 69016566 69016844 -76572444 + AluY SINE Alu 1 279 -32 249 363 102 6 chr10 69016991 69017148 -76572140 + MER5A DNA MER1_type 7 178 -11 1098 162 4 60 chr10 69017251 69017380 -76571908 - L1MA4A LINE L1 -2 6301 6193 1948 166 27 0 chr10 69017380 69017676 -76571612 - AluJb SINE Alu -8 304 1 1098 162 4 60 chr10 69017676 69017811 -76571477 - L1MA4A LINE L1 -110 6193 6052 1631 199 0 11 chr10 69017986 69018268 -76571020 + AluJo SINE Alu 3 281 -31 22 0 0 0 chr10 69018269 69018291 -76570997 + AT_rich Low_complexity Low_complexity 1 22 0 197 125 0 62 chr10 69019256 69019304 -76569984 + (A)n Simple_repeat Simple_repeat 1 45 0 1671 171 28 0 chr10 69019639 69019926 -76569362 + AluJb SINE Alu 3 297 -15 813 166 17 50 chr10 69020081 69020262 -76569026 - FRAM SINE Alu -2 174 1 262 333 128 36 chr10 69020338 69020533 -76568755 + L2 LINE L2 2590 2802 -512 211 280 172 0 chr10 69021498 69021591 -76567697 - MIR3 SINE MIR -33 175 67 2211 94 0 0 chr10 69022345 69022633 -76566655 + AluSq SINE Alu 19 306 -7 328 214 205 8 chr10 69022884 69023001 -76566287 + MLT1E1 LTR MaLR 1 140 -514 1805 143 42 31 chr10 69023429 69023787 -76565501 - L1PB1 LINE L1 -7 6860 6499 180 219 0 0 chr10 69023788 69023829 -76565459 + (CATATA)n Simple_repeat Simple_repeat 3 43 0 9506 194 18 21 chr10 69023829 69025194 -76564094 - L1PB1 LINE L1 -359 6508 5140 180 0 0 0 chr10 69025194 69025214 -76564074 + (TTTTA)n Simple_repeat Simple_repeat 3 22 0 9506 194 18 21 chr10 69025214 69026643 -76562645 - L1PB1 LINE L1 -1727 5140 3723 1191 152 142 52 chr10 69026647 69026957 -76562331 + MER4A LTR ERV1 5 342 -322 534 105 254 9 chr10 69027018 69027132 -76562156 + MER4C LTR ERV1 300 441 -24 4065 160 49 17 chr10 69027157 69027243 -76562045 - L1PB1 LINE L1 -3135 3727 3645 2052 140 0 0 chr10 69027243 69027535 -76561753 - AluSx SINE Alu -16 296 5 4065 160 49 17 chr10 69027535 69028592 -76560696 - L1PB1 LINE L1 -3217 3645 2550 274 252 248 23 chr10 69028778 69029040 -76560248 + L1ME4a LINE L1 5757 6077 -44 2368 156 64 12 chr10 69029093 69029498 -76559790 + MSTB LTR MaLR 1 426 0 464 291 89 6 chr10 69029765 69029923 -76559365 - MIR SINE MIR -72 190 20 309 261 0 54 chr10 69031115 69031207 -76558081 + MER103 DNA DNA 35 121 -45 590 271 5 53 chr10 69031897 69032085 -76557203 - MER5A DNA MER1_type 0 189 11 1055 270 0 4 chr10 69032148 69032418 -76556870 + AluSx SINE Alu 35 303 -9 267 339 66 20 chr10 69032987 69033288 -76556000 - LTR16A LTR ERVL -75 375 61 196 276 122 65 chr10 69033592 69033715 -76555573 - MIR3 SINE MIR -70 138 9 424 141 39 167 chr10 69033939 69033974 -76555314 - MER3 DNA MER1_type -40 122 84 2476 81 3 0 chr10 69033974 69034281 -76555007 + AluSp SINE Alu 1 308 -5 424 141 39 167 chr10 69034281 69034299 -76554989 - MER3 DNA MER1_type -78 84 65 1980 151 0 3 chr10 69034299 69034598 -76554690 + AluJb SINE Alu 1 298 -14 424 141 39 167 chr10 69034598 69034699 -76554589 - MER3 DNA MER1_type -97 65 34 195 100 0 0 chr10 69035140 69035170 -76554118 + (CA)n Simple_repeat Simple_repeat 1 30 0 13309 50 3 12 chr10 69035397 69037151 -76552137 + L1P LINE L1 1978 3715 -2431 25 31 0 0 chr10 69037798 69037830 -76551458 + AT_rich Low_complexity Low_complexity 1 32 0 201 74 0 0 chr10 69038848 69038875 -76550413 + (TTATA)n Simple_repeat Simple_repeat 5 31 0 41 36 0 0 chr10 69039462 69039517 -76549771 + AT_rich Low_complexity Low_complexity 1 55 0 23 54 0 0 chr10 69039557 69039594 -76549694 + AT_rich Low_complexity Low_complexity 1 37 0 857 286 134 28 chr10 69040265 69040666 -76548622 + L1MCb LINE L1 3 455 -5590 2388 146 35 19 chr10 69040666 69041091 -76548197 + MSTB1 LTR MaLR 1 432 0 857 286 134 28 chr10 69041091 69041123 -76548165 + L1MCb LINE L1 455 482 -5563 * 1825 231 59 7 chr10 69041120 69041575 -76547713 + L1MC3 LINE L1 5897 6375 -1410 * 2342 190 79 12 chr10 69041566 69041932 -76547356 + L1MC3 LINE L1 7190 7607 -178 2096 113 13 10 chr10 69041932 69042232 -76547056 + AluSx SINE Alu 1 301 -11 2342 190 79 12 chr10 69042232 69042424 -76546864 + L1MC3 LINE L1 7607 7785 0 660 321 149 25 chr10 69042728 69043123 -76546165 + L2 LINE L2 2805 3248 -65 2162 144 49 0 chr10 69044213 69044560 -76544728 + THE1B LTR MaLR 1 364 0 504 266 51 32 chr10 69044965 69045123 -76544165 + MIR SINE MIR 56 216 -46 370 216 88 64 chr10 69045347 69045472 -76543816 - MIR3 SINE MIR -13 195 68 23 0 0 0 chr10 69047033 69047056 -76542232 + AT_rich Low_complexity Low_complexity 1 23 0 291 267 56 0 chr10 69047420 69047510 -76541778 + MER103 DNA DNA 3 97 -69 32402 92 7 6 chr10 69048507 69052932 -76536356 - HERV9 LTR ERV1 -3913 4486 58 5274 64 3 180 chr10 69052956 69053960 -76535328 - LTR12 LTR ERV1 0 826 1 2011 192 81 120 chr10 69053972 69054747 -76534541 + LTR1B LTR ERV1 1 745 -81 424 326 15 15 chr10 69055332 69055464 -76533824 - MER5A DNA MER1_type -51 138 7 269 200 4 8 chr10 69056159 69056220 -76533068 - Alu SINE Alu -254 47 2 1857 155 0 38 chr10 69056242 69056559 -76532729 - AluSx SINE Alu -5 307 3 21 0 0 0 chr10 69056744 69056765 -76532523 + AT_rich Low_complexity Low_complexity 1 21 0 446 281 103 32 chr10 69057105 69057600 -76531688 + L1ME2 LINE L1 2377 2906 -3240 272 271 118 32 chr10 69057639 69057919 -76531369 + L1ME2 LINE L1 2974 3277 -2869 283 291 139 13 chr10 69058209 69058360 -76530928 - L1ME LINE L1 -440 5681 5512 22 35 0 0 chr10 69059527 69059556 -76529732 + AT_rich Low_complexity Low_complexity 1 29 0 1858 174 3 7 chr10 69059742 69060052 -76529236 + AluJb SINE Alu 1 309 -3 1150 204 51 131 chr10 69062833 69063632 -76525656 + LTR8A LTR ERV1 1 719 -7 1948 136 9 46 chr10 69063663 69064009 -76525279 - MER1B DNA MER1_type -4 333 1 832 222 91 18 chr10 69064462 69064683 -76524605 + LTR8 LTR ERV1 9 245 -446 592 319 93 61 chr10 69065324 69065795 -76523493 + L1ME2 LINE L1 3998 4452 -1694 2200 90 9 40 chr10 69065795 69066116 -76523172 + AluSq SINE Alu 1 311 -2 592 319 93 61 chr10 69066116 69066835 -76522453 + L1ME2 LINE L1 4452 5234 -912 492 345 30 54 chr10 69066840 69067416 -76521872 + L1ME2 LINE L1 5336 5897 -267 236 171 43 60 chr10 69067430 69067547 -76521741 + (CATATA)n Simple_repeat Simple_repeat 2 116 0 21 36 0 0 chr10 69068296 69068324 -76520964 + AT_rich Low_complexity Low_complexity 1 28 0 22 88 0 0 chr10 69068433 69068490 -76520798 + AT_rich Low_complexity Low_complexity 1 57 0 21 57 0 0 chr10 69068596 69068631 -76520657 + AT_rich Low_complexity Low_complexity 1 35 0 22 56 0 0 chr10 69068707 69068743 -76520545 + AT_rich Low_complexity Low_complexity 1 36 0 1999 136 3 13 chr10 69069454 69069770 -76519518 - AluSq SINE Alu 0 313 1 2889 139 8 110 chr10 69070268 69070903 -76518385 + MER101B LTR ERV1 1 570 0 3520 167 30 5 chr10 69071408 69072067 -76517221 - MER67C LTR ERV1 0 710 35 642 176 24 16 chr10 69072097 69072222 -76517066 - FLAM_C SINE Alu -12 131 6 328 358 70 5 chr10 69072783 69072984 -76516304 + MIR SINE MIR 49 262 0 211 247 140 11 chr10 69073262 69073355 -76515933 + MER5C DNA MER1_type 220 324 0 181 252 165 16 chr10 69073410 69073537 -76515751 - MER5C DNA MER1_type -55 269 124 22 35 0 0 chr10 69074216 69074245 -76515043 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr10 69075092 69075113 -76514175 + AT_rich Low_complexity Low_complexity 1 21 0 250 303 107 8 chr10 69076389 69076511 -76512777 - MER5C DNA MER1_type -185 139 6 3635 57 2 0 chr10 69076920 69076931 -76512357 + L1P3 LINE L1 5345 5354 -800 2734 68 6 0 chr10 69076931 69077286 -76512002 - L1PA7 LINE L1 -3 6151 5795 3635 57 2 0 chr10 69077286 69077730 -76511558 + L1PA7 LINE L1 5354 5801 -353 1073 133 46 70 chr10 69078106 69078347 -76510941 + L1MB2 LINE L1 5934 6168 -3 756 267 75 53 chr10 69079093 69079453 -76509835 + MLT1J LTR MaLR 1 368 -143 30 77 0 0 chr10 69079663 69079728 -76509560 + AT_rich Low_complexity Low_complexity 1 65 0 279 0 0 0 chr10 69079739 69079770 -76509518 + (TG)n Simple_repeat Simple_repeat 2 32 0 1996 159 16 21 chr10 69079824 69080201 -76509087 + THE1C LTR MaLR 1 375 0 829 292 83 49 chr10 69080431 69080605 -76508683 - HAL1 LINE L1 -228 2279 2112 2127 161 65 24 chr10 69080605 69081021 -76508267 + Tigger2a DNA MER2_type 1 433 -1 829 292 83 49 chr10 69081021 69081438 -76507850 - HAL1 LINE L1 -395 2112 1668 2515 242 26 25 chr10 69081454 69081603 -76507685 - MLT1A1-int LTR MaLR -1079 656 509 2353 88 0 16 chr10 69081603 69081911 -76507377 - AluSg SINE Alu -7 303 1 2515 242 26 25 chr10 69081911 69082413 -76506875 - MLT1A1-int LTR MaLR -1226 509 4 1472 202 101 42 chr10 69082416 69082752 -76506536 - MLT1A1 LTR MaLR 0 365 10 284 232 0 53 chr10 69082766 69082861 -76506427 - HAL1 LINE L1 -1580 927 838 2392 175 16 78 chr10 69083874 69084444 -76504844 + LTR29 LTR ERV1 1 534 -88 3941 167 57 41 chr10 69084444 69085298 -76503990 + MER4D LTR ERV1 1 868 -35 2124 109 26 10 chr10 69085299 69085602 -76503686 + AluSx SINE Alu 1 308 -4 1047 165 0 0 chr10 69085605 69085763 -76503525 + AluSg/x SINE Alu 141 298 -14 593 158 10 0 chr10 69085833 69085934 -76503354 + MER39B LTR ERV1 552 653 0 425 276 98 8 chr10 69087484 69087607 -76501681 - L2 LINE L2 0 3313 3180 3441 136 22 51 chr10 69088645 69089764 -76499524 + L1M1 LINE L1 4714 5787 -518 2400 166 65 109 chr10 69089764 69089971 -76499317 + LTR8A LTR ERV1 1 216 -511 2189 129 10 0 chr10 69089971 69090281 -76499007 + AluSq SINE Alu 1 313 0 2400 166 65 109 chr10 69090281 69090736 -76498552 + LTR8A LTR ERV1 216 634 -93 336 136 15 15 chr10 69090737 69090803 -76498485 + LTR60 LTR ERV1 1 66 -520 1014 259 46 25 chr10 69090924 69091248 -76498040 + LTR43 LTR ERV1 132 462 -140 2959 126 46 2 chr10 69091448 69091947 -76497341 + L1MA3 LINE L1 5783 6303 -2 283 325 18 9 chr10 69092517 69092631 -76496657 - ERVL LTR ERVL -2211 3553 3439 406 312 71 0 chr10 69092777 69092931 -76496357 - ERVL LTR ERVL -2521 3243 3079 852 276 47 24 chr10 69093798 69094219 -76495069 - MSTB2 LTR MaLR -19 438 1 1894 172 48 50 chr10 69094219 69094637 -76494651 - MLT1A1-int LTR MaLR 0 1735 1319 876 200 0 6 chr10 69094642 69094817 -76494471 - MLT1A1-int LTR MaLR -1560 175 2 1273 245 89 22 chr10 69094819 69095190 -76494098 - MSTD LTR MaLR 0 396 1 657 283 133 0 chr10 69095190 69095416 -76493872 - LTR50 LTR ERVL -525 270 15 328 284 0 18 chr10 69095763 69095872 -76493416 - LTR67 LTR ERVL -40 517 411 495 311 44 16 chr10 69096630 69096813 -76492475 - L3 LINE CR1 -39 1538 1351 718 263 115 41 chr10 69096815 69097180 -76492108 - LTR16A LTR ERVL 0 450 59 409 208 0 0 chr10 69097528 69097600 -76491688 - tRNA-Glu-GAG tRNA tRNA -3 72 1 275 327 82 63 chr10 69097616 69097885 -76491403 - L3 LINE CR1 -581 996 723 * 324 195 117 0 chr10 69097853 69097930 -76491358 + L2 LINE L2 3227 3312 -1 579 303 81 0 chr10 69098981 69099179 -76490109 - MIR SINE MIR -32 230 17 2264 122 5 42 chr10 69099609 69099963 -76489325 + L1PA15 LINE L1 5788 6128 -37 2202 150 8 14 chr10 69099963 69100329 -76488959 - THE1B LTR MaLR 0 364 1 2264 122 5 42 chr10 69100329 69100358 -76488930 + L1PA15 LINE L1 6128 6157 -8 392 312 108 6 chr10 69100430 69100587 -76488701 - MIR SINE MIR -27 235 63 264 239 0 0 chr10 69100698 69100765 -76488523 - LTR50 LTR ERVL -2 793 727 664 252 178 26 chr10 69100806 69101378 -76487910 - LTR50 LTR ERVL -45 750 7 246 230 81 14 chr10 69102116 69102190 -76487098 - L2 LINE L2 -10 3303 3225 388 279 85 58 chr10 69102214 69102472 -76486816 + L1M4 LINE L1 3275 3539 -2607 1710 142 6 80 chr10 69103059 69103383 -76485905 - AluJo SINE Alu -6 306 7 1668 241 109 52 chr10 69103956 69104642 -76484646 - MER50 LTR ERV1 0 734 10 1319 211 115 41 chr10 69104816 69105121 -76484167 + LTR2 LTR ERV1 3 349 -100 2268 73 0 13 chr10 69105121 69105422 -76483866 - AluY SINE Alu -14 297 1 1319 211 115 41 chr10 69105422 69105532 -76483756 + LTR2 LTR ERV1 349 449 0 228 150 75 0 chr10 69105782 69105862 -76483426 + (TA)n Simple_repeat Simple_repeat 1 86 0 973 153 53 9 chr10 69105966 69106194 -76483094 - Charlie5 DNA MER1_type -82 2530 2293 2152 109 7 0 chr10 69106194 69106488 -76482800 + AluSc SINE Alu 1 296 -13 257 137 39 0 chr10 69106488 69106539 -76482749 + GA-rich Low_complexity Low_complexity 1 53 0 394 176 0 0 chr10 69106594 69106668 -76482620 - Charlie5 DNA MER1_type -2503 109 36 696 299 44 32 chr10 69106837 69107088 -76482200 - MIR SINE MIR -1 261 8 692 260 20 36 chr10 69108145 69108341 -76480947 - MIR SINE MIR -7 255 63 7696 89 5 7 chr10 69109033 69110092 -76479196 - MER11C LTR ERVK -14 1057 1 1632 142 0 50 chr10 69110257 69110539 -76478749 + AluSx SINE Alu 1 268 -44 966 245 5 0 chr10 69110623 69110811 -76478477 - Tigger7 DNA MER2_type -494 211 23 635 179 36 0 chr10 69110828 69110940 -76478348 - Tigger7 DNA MER2_type -2140 347 232 28 0 0 0 chr10 69111153 69111181 -76478107 + AT_rich Low_complexity Low_complexity 1 28 0 247 349 14 41 chr10 69111282 69111428 -76477860 - L2 LINE L2 -1 3312 3171 977 324 42 52 chr10 69111893 69112486 -76476802 + L2 LINE L2 1898 2484 -830 1147 240 108 52 chr10 69112491 69112974 -76476314 + L1MC4 LINE L1 6527 7036 -1006 * 2026 233 76 28 chr10 69112971 69113616 -76475672 + L1MC4a LINE L1 7127 7802 -6 954 306 46 35 chr10 69116225 69116747 -76472541 + L1ME2 LINE L1 3673 4200 -1946 1587 232 27 24 chr10 69116749 69117120 -76472168 + MLT2D LTR ERVL 1 375 -39 453 36 0 0 chr10 69117120 69117175 -76472113 + (CA)n Simple_repeat Simple_repeat 2 56 0 1587 232 27 24 chr10 69117175 69117216 -76472072 + MLT2D LTR ERVL 375 414 0 773 243 36 0 chr10 69117216 69117431 -76471857 + L1ME2 LINE L1 5638 5863 -301 577 271 178 16 chr10 69117441 69117762 -76471526 - L2 LINE L2 -256 3057 2687 1293 215 32 32 chr10 69118324 69118664 -76470624 + MLT1D LTR MaLR 1 340 -165 2470 124 0 5 chr10 69118665 69119037 -76470251 - L1P4 LINE L1 -486 5679 5310 909 196 22 6 chr10 69119068 69119247 -76470041 + MLT1D LTR MaLR 324 505 0 377 192 41 0 chr10 69119330 69119403 -76469885 - MER67D LTR ERV1 -438 76 1 22 0 0 0 chr10 69119773 69119795 -76469493 + AT_rich Low_complexity Low_complexity 1 22 0 209 306 157 0 chr10 69120345 69120479 -76468809 - MIR SINE MIR -3 259 105 180 0 0 0 chr10 69120586 69120606 -76468682 + (TTA)n Simple_repeat Simple_repeat 1 20 0 895 253 65 27 chr10 69121077 69121338 -76467950 - MLT1H LTR MaLR -276 273 3 200 128 26 0 chr10 69121669 69121708 -76467580 + A-rich Low_complexity Low_complexity 2 41 0 273 57 0 0 chr10 69124767 69124802 -76464486 + (TTG)n Simple_repeat Simple_repeat 2 36 0 1673 154 3 54 chr10 69124804 69125102 -76464186 - AluSx SINE Alu -29 283 1 717 288 41 36 chr10 69125943 69126162 -76463126 + MIR SINE MIR 11 230 -32 663 261 14 51 chr10 69126200 69126415 -76462873 + MIR SINE MIR 2 208 -54 678 185 25 0 chr10 69126918 69127075 -76462213 + L1MD1 LINE L1 6081 6241 -1 1683 214 24 55 chr10 69127245 69127666 -76461622 - MER74A LTR ERVL -30 528 121 288 304 29 43 chr10 69128818 69128956 -76460332 + MIR SINE MIR 126 261 -1 673 160 0 8 chr10 69129352 69129477 -76459811 + L1MA9 LINE L1 6187 6310 -2 1931 224 99 55 chr10 69129492 69130196 -76459092 + L1MC4 LINE L1 7162 7896 -146 848 129 27 7 chr10 69132142 69132289 -76456999 - L1MA9 LINE L1 0 6312 6163 2516 55 0 3 chr10 69132856 69133168 -76456120 - AluY SINE Alu 0 311 1 209 281 0 35 chr10 69134171 69134228 -76455060 - L2 LINE L2 -15 3298 3244 260 82 0 20 chr10 69134236 69134285 -76455003 + (TTTTG)n Simple_repeat Simple_repeat 3 50 0 5785 99 53 3 chr10 69134287 69135155 -76454133 - L1PA11 LINE L1 -10 6164 5254 223 293 24 24 chr10 69135530 69135612 -76453676 + MIR3 SINE MIR 93 174 -34 28 71 0 0 chr10 69135765 69135821 -76453467 + AT_rich Low_complexity Low_complexity 1 56 0 2187 159 74 17 chr10 69137235 69137638 -76451650 + MSTB LTR MaLR 1 426 0 4900 174 39 37 chr10 69138117 69139822 -76449466 - L1PA16 LINE L1 -1 6165 4473 327 216 16 54 chr10 69140095 69140280 -76449008 + (TA)n Simple_repeat Simple_repeat 1 178 0 22 35 0 0 chr10 69140466 69140495 -76448793 + AT_rich Low_complexity Low_complexity 1 29 0 306 272 76 76 chr10 69140647 69140805 -76448483 + L3 LINE CR1 1305 1462 -115 369 315 27 20 chr10 69141755 69141901 -76447387 - MER5A DNA MER1_type 0 189 43 227 391 35 9 chr10 69141921 69142036 -76447252 + MER5A DNA MER1_type 44 161 -28 265 392 81 29 chr10 69143592 69143865 -76445423 - L2 LINE L2 -556 2758 2472 239 281 0 0 chr10 69144689 69144753 -76444535 - MER94 DNA DNA -54 80 17 * 595 248 41 7 chr10 69144751 69144896 -76444392 + MLT1A2 LTR MaLR 225 374 0 280 336 75 22 chr10 69145148 69145282 -76444006 - MIR SINE MIR -119 143 3 341 358 29 7 chr10 69147840 69147977 -76441311 + MER5A DNA MER1_type 48 187 -2 21 89 0 0 chr10 69148313 69148369 -76440919 + AT_rich Low_complexity Low_complexity 1 56 0 2182 117 50 8 chr10 69149507 69149866 -76439422 - THE1C LTR MaLR 0 375 2 277 188 130 0 chr10 69150088 69150157 -76439131 + L1ME1 LINE L1 5389 5466 -700 689 205 0 0 chr10 69150175 69150292 -76438996 + FLAM_C SINE Alu 7 123 -20 1728 252 65 11 chr10 69150309 69150829 -76438459 + L1ME1 LINE L1 5466 6013 -153 23 0 0 0 chr10 69151077 69151100 -76438188 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr10 69151337 69151359 -76437929 + AT_rich Low_complexity Low_complexity 1 22 0 221 183 21 54 chr10 69151400 69151493 -76437795 + (TA)n Simple_repeat Simple_repeat 2 91 0 29 47 0 0 chr10 69151718 69151761 -76437527 + AT_rich Low_complexity Low_complexity 1 43 0 229 263 18 0 chr10 69151880 69151937 -76437351 + GA-rich Low_complexity Low_complexity 3 60 0 2060 135 6 3 chr10 69152036 69152347 -76436941 + AluSx SINE Alu 1 312 0 22 0 0 0 chr10 69152530 69152552 -76436736 + AT_rich Low_complexity Low_complexity 1 22 0 1824 129 21 0 chr10 69152794 69153074 -76436214 + MER7A DNA MER2_type 15 298 -48 241 167 95 0 chr10 69153142 69153184 -76436104 + MER7A DNA MER2_type 301 346 0 2075 119 20 10 chr10 69153369 69153664 -76435624 + AluSx SINE Alu 3 300 -12 183 42 0 0 chr10 69153710 69153734 -76435554 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 1071 172 5 0 chr10 69154306 69154498 -76434790 + L1PBa LINE L1 3 195 -6668 7405 99 26 12 chr10 69154503 69156156 -76433132 + L1PBa LINE L1 636 2473 -4390 1506 183 7 21 chr10 69156557 69156841 -76432447 - AluJo SINE Alu -25 287 8 230 310 35 95 chr10 69156931 69157131 -76432157 + L2 LINE L2 1749 1936 -1378 782 313 107 10 chr10 69157675 69157985 -76431303 + L2 LINE L2 2005 2344 -970 1778 188 11 19 chr10 69157988 69158356 -76430932 - MLT1A1 LTR MaLR 0 365 1 2003 222 41 108 chr10 69158356 69158535 -76430753 - MLT1A1-int LTR MaLR 0 1735 1546 2272 66 0 3 chr10 69158535 69158823 -76430465 + AluY SINE Alu 1 287 -24 2003 222 41 108 chr10 69158823 69158836 -76430452 - MLT1A1-int LTR MaLR -189 1546 1534 180 0 0 0 chr10 69158836 69158856 -76430432 + (TTAAA)n Simple_repeat Simple_repeat 2 21 0 2003 222 41 108 chr10 69158856 69159848 -76429440 - MLT1A1-int LTR MaLR -201 1534 255 1562 221 22 3 chr10 69159848 69160164 -76429124 - MLT2B1 LTR ERVL -198 322 1 1410 183 67 30 chr10 69160167 69160495 -76428793 - ERVL-B1 LTR ERVL -10 5754 5415 10120 175 9 8 chr10 69160540 69162247 -76427041 - ERVL-B1 LTR ERVL -346 5418 3710 3861 196 55 20 chr10 69162247 69163033 -76426255 - ERVL-B1 LTR ERVL -3275 2489 1677 248 132 0 0 chr10 69163035 69163073 -76426215 + L1MA8 LINE L1 6209 6246 -45 21 57 0 19 chr10 69163074 69163088 -76426200 + AT_rich Low_complexity Low_complexity 1 14 -38 6878 87 9 14 chr10 69163088 69164826 -76424462 - L1PA7 LINE L1 -4 6150 4397 21 57 0 19 chr10 69164826 69164864 -76424424 + AT_rich Low_complexity Low_complexity 14 52 0 369 145 0 14 chr10 69164879 69164948 -76424340 - L1PA7 LINE L1 -3218 2928 2861 * 23190 133 13 80 chr10 69164943 69169639 -76419649 - L1P LINE L1 -1753 4393 12 234 139 0 0 chr10 69169649 69169692 -76419596 + L1MA8 LINE L1 6245 6287 -4 4961 209 17 11 chr10 69169717 69170709 -76418579 - ERVL-B1 LTR ERVL -4087 1677 680 2692 226 46 92 chr10 69170752 69171192 -76418096 - ERVL-B1 LTR ERVL -5000 764 333 240 167 0 0 chr10 69171192 69171234 -76418054 - 5S rRNA rRNA -79 42 1 2692 226 46 92 chr10 69171234 69171552 -76417736 - ERVL-B1 LTR ERVL -5431 333 2 1506 221 132 52 chr10 69171580 69172019 -76417269 - MLT2B3 LTR ERVL -80 474 1 717 334 135 6 chr10 69172154 69172574 -76416714 + L2 LINE L2 2624 3098 -215 577 37 12 12 chr10 69172641 69172722 -76416566 + (TCTA)n Simple_repeat Simple_repeat 3 83 0 21 0 0 0 chr10 69175452 69175473 -76413815 + AT_rich Low_complexity Low_complexity 1 21 0 436 255 206 57 chr10 69176053 69176335 -76412953 + MLT1H LTR MaLR 219 542 -7 29 0 0 0 chr10 69177847 69177876 -76411412 + AT_rich Low_complexity Low_complexity 1 29 0 218 105 0 88 chr10 69177931 69177988 -76411300 + (TAAAAA)n Simple_repeat Simple_repeat 6 57 0 255 133 0 0 chr10 69178174 69178219 -76411069 + (TTTAA)n Simple_repeat Simple_repeat 5 49 0 262 226 0 0 chr10 69178489 69178542 -76410746 - L2 LINE L2 0 3313 3261 1059 209 58 15 chr10 69180197 69180526 -76408762 - MER33 DNA MER1_type -28 296 1 194 261 62 15 chr10 69180579 69180644 -76408644 - L2 LINE L2 -182 3090 3023 842 148 0 0 chr10 69180933 69181055 -76408233 + FLAM_C SINE Alu 1 122 -21 21 0 0 0 chr10 69181055 69181076 -76408212 + AT_rich Low_complexity Low_complexity 1 21 0 1441 188 32 49 chr10 69181156 69181501 -76407787 + MER44D DNA MER2_type 1 609 0 255 79 0 0 chr10 69181675 69181713 -76407575 + (TG)n Simple_repeat Simple_repeat 2 39 0 225 206 29 29 chr10 69182218 69182286 -76407002 + GA-rich Low_complexity Low_complexity 4 71 0 236 313 21 0 chr10 69182901 69182997 -76406291 - L1ME3 LINE L1 -22 6140 6043 1314 263 106 22 chr10 69183142 69183776 -76405512 - L1ME3 LINE L1 -222 5948 5262 2111 100 7 3 chr10 69183879 69184202 -76405086 + AluSq SINE Alu 1 324 0 284 263 83 52 chr10 69186001 69186420 -76402868 - L1ME3 LINE L1 -1606 4540 4109 455 290 106 70 chr10 69187345 69187686 -76401602 - MLT1H1 LTR MaLR 0 555 203 187 68 0 68 chr10 69187751 69187795 -76401493 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 273 128 0 0 chr10 69187878 69187925 -76401363 + (TAA)n Simple_repeat Simple_repeat 2 48 0 1009 244 5 0 chr10 69187954 69188175 -76401113 - MIR SINE MIR -38 224 3 46 0 0 0 chr10 69188633 69188679 -76400609 + AT_rich Low_complexity Low_complexity 1 46 0 32 0 0 0 chr10 69190051 69190083 -76399205 + AT_rich Low_complexity Low_complexity 1 32 0 255 389 28 0 chr10 69190814 69190922 -76398366 - L2 LINE L2 -1 3271 3161 219 297 186 0 chr10 69191470 69191588 -76397700 - L2 LINE L2 0 3272 3133 306 240 41 82 chr10 69192297 69192493 -76396795 + L1M4 LINE L1 4963 5150 -996 715 318 60 14 chr10 69192647 69192999 -76396289 - L1ME3A LINE L1 -35 6135 5768 250 77 0 39 chr10 69194079 69194131 -76395157 + (TTTTA)n Simple_repeat Simple_repeat 1 50 0 7433 25 0 1 chr10 69194131 69195731 -76393557 - L1PA3 LINE L1 -24 6131 4533 17315 29 1 0 chr10 69195731 69197814 -76391474 + L1P LINE L1 2404 4487 -1659 1927 115 49 0 chr10 69197893 69198180 -76391108 + AluSx SINE Alu 1 301 -11 4934 165 99 11 chr10 69198495 69199432 -76389856 + LTR28 LTR ERV1 1 1020 0 21 0 0 0 chr10 69201015 69201036 -76388252 + AT_rich Low_complexity Low_complexity 1 21 0 448 333 161 15 chr10 69202237 69202915 -76386373 - L2 LINE L2 -15 3298 2460 412 308 203 6 chr10 69202930 69203112 -76386176 - L2 LINE L2 -989 2325 2108 234 363 63 26 chr10 69203127 69203317 -76385971 - L2 LINE L2 -534 2780 2584 372 158 183 0 chr10 69203363 69203445 -76385843 + L1MA9 LINE L1 6215 6311 -1 227 276 181 0 chr10 69203769 69203874 -76385414 + LTR16A1 LTR ERVL 1 124 -333 364 293 167 35 chr10 69203931 69204105 -76385183 + LTR16A1 LTR ERVL 261 457 0 21 0 0 0 chr10 69204152 69204173 -76385115 + AT_rich Low_complexity Low_complexity 1 21 0 31 26 0 0 chr10 69206115 69206153 -76383135 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr10 69206878 69206900 -76382388 + AT_rich Low_complexity Low_complexity 1 22 0 267 286 17 25 chr10 69207447 69207566 -76381722 + LTR33 LTR ERVL 396 513 -8 462 194 83 0 chr10 69207600 69207708 -76381580 + MER5C DNA MER1_type 7 123 -201 2179 98 3 31 chr10 69207794 69208111 -76381177 + AluY SINE Alu 1 308 -3 201 283 0 19 chr10 69208537 69208590 -76380698 - L2 LINE L2 -5 3267 3216 21 57 0 0 chr10 69208605 69208640 -76380648 + AT_rich Low_complexity Low_complexity 1 35 0 501 297 95 11 chr10 69209030 69209575 -76379713 - L1ME LINE L1 -618 5544 4961 270 191 11 34 chr10 69210339 69210428 -76378860 + (CATA)n Simple_repeat Simple_repeat 2 88 0 290 277 0 12 chr10 69210439 69210522 -76378766 + (TA)n Simple_repeat Simple_repeat 2 83 0 2201 106 0 3 chr10 69210652 69210944 -76378344 - AluSg SINE Alu -19 291 1 2390 81 0 3 chr10 69211690 69211998 -76377290 - AluSq SINE Alu -6 307 1 245 206 0 15 chr10 69212230 69212298 -76376990 + (TA)n Simple_repeat Simple_repeat 2 68 0 25 75 0 0 chr10 69212611 69212664 -76376624 + AT_rich Low_complexity Low_complexity 1 53 0 326 360 107 4 chr10 69212666 69212919 -76376369 + MLT1J2 LTR MaLR 1 279 -171 349 379 155 0 chr10 69213113 69213422 -76375866 + L2 LINE L2 1959 2315 -999 834 193 27 5 chr10 69213423 69213610 -76375678 + L1MA8 LINE L1 6098 6288 -3 381 356 158 4 chr10 69213627 69213880 -76375408 + L2 LINE L2 2322 2613 -701 206 265 0 20 chr10 69213882 69213931 -76375357 - L2 LINE L2 -571 2743 2696 202 338 15 0 chr10 69213971 69214039 -76375249 + L2 LINE L2 2671 2739 -575 213 136 91 0 chr10 69214337 69214403 -76374885 + (TA)n Simple_repeat Simple_repeat 2 73 0 1430 193 55 11 chr10 69214412 69214687 -76374601 - AluJo SINE Alu -25 287 1 903 317 49 55 chr10 69214773 69215484 -76373804 + L2 LINE L2 2595 3311 -2 385 325 54 18 chr10 69215829 69215995 -76373293 + MER5B DNA MER1_type 7 178 0 27 0 0 0 chr10 69216473 69216500 -76372788 + AT_rich Low_complexity Low_complexity 1 27 0 221 356 10 29 chr10 69216516 69216620 -76372668 + MER5B DNA MER1_type 8 109 -69 696 233 81 36 chr10 69216634 69216943 -76372345 - L1MC5 LINE L1 -33 7928 7606 291 291 13 25 chr10 69216988 69217146 -76372142 - L1MC5 LINE L1 -440 7521 7366 183 353 0 15 chr10 69217665 69217733 -76371555 + MER5A DNA MER1_type 95 161 -28 1915 145 0 0 chr10 69217784 69218073 -76371215 + AluSx SINE Alu 23 311 -1 667 227 43 37 chr10 69219680 69219722 -76369566 + MER58A DNA MER1_type 39 79 -2341 1860 153 40 35 chr10 69219722 69220095 -76369193 - THE1C LTR MaLR 0 375 1 667 227 43 37 chr10 69220095 69220215 -76369073 + MER58A DNA MER1_type 79 202 -22 31 0 0 0 chr10 69220957 69220988 -76368300 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr10 69221025 69221046 -76368242 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr10 69221080 69221115 -76368173 + AT_rich Low_complexity Low_complexity 1 35 0 355 267 26 43 chr10 69221166 69221282 -76368006 - MER5A DNA MER1_type -4 185 72 2152 143 27 14 chr10 69221416 69221786 -76367502 + THE1C LTR MaLR 1 375 0 25 95 0 0 chr10 69222377 69222451 -76366837 + AT_rich Low_complexity Low_complexity 1 74 0 817 227 68 33 chr10 69222454 69222831 -76366457 - LTR16C LTR ERVL -4 487 67 267 284 193 24 chr10 69222886 69223140 -76366148 - L1MEd LINE L1 -2098 4031 3735 604 75 0 0 chr10 69223197 69223277 -76366011 + MADE1 DNA Mariner 1 80 0 526 309 100 33 chr10 69223412 69223927 -76365361 - L1MEd LINE L1 -2638 3491 2938 270 232 0 62 chr10 69223943 69224055 -76365233 - L1MC5 LINE L1 -47 7914 7810 1750 128 9 25 chr10 69224057 69224408 -76364880 - MER4A LTR ERV1 0 664 261 505 149 53 11 chr10 69224408 69224502 -76364786 - MER4A LTR ERV1 -566 98 1 870 252 58 33 chr10 69224558 69225042 -76364246 - L1MC5 LINE L1 -204 7757 7262 486 265 64 74 chr10 69225165 69225678 -76363610 - L1MC5 LINE L1 -733 7228 6721 315 325 43 0 chr10 69225681 69225869 -76363419 - L1MEd LINE L1 -3174 2955 2760 390 235 84 42 chr10 69225891 69226010 -76363278 + MER58A DNA MER1_type 13 136 0 1760 210 72 100 chr10 69226018 69226718 -76362570 - MER61E LTR ERV1 -4 774 1 337 287 31 54 chr10 69226820 69226949 -76362339 - L1MEd LINE L1 -3394 2735 2610 2110 133 0 0 chr10 69227456 69227758 -76361530 - AluSx SINE Alu -9 303 2 320 333 26 0 chr10 69227768 69227921 -76361367 - HAL1 LINE L1 -877 1630 1474 195 129 0 0 chr10 69227970 69228001 -76361287 + (TG)n Simple_repeat Simple_repeat 2 32 0 227 346 38 30 chr10 69228110 69228373 -76360915 - L1MEd LINE L1 -4995 1124 860 252 196 20 49 chr10 69229034 69229136 -76360152 + (TCTA)n Simple_repeat Simple_repeat 4 102 0 25 0 0 0 chr10 69229310 69229335 -76359953 + AT_rich Low_complexity Low_complexity 1 25 0 992 246 17 10 chr10 69229406 69229694 -76359594 + L1PB4 LINE L1 2771 3060 -3086 * 4939 183 16 29 chr10 69229674 69230611 -76358677 + L1PB4 LINE L1 4397 5313 -843 2102 119 0 0 chr10 69230611 69230904 -76358384 + AluSx SINE Alu 1 293 -19 4939 183 16 29 chr10 69230904 69231736 -76357552 + L1PB4 LINE L1 5313 6154 -2 297 174 41 102 chr10 69232428 69232526 -76356762 + L2 LINE L2 3221 3312 -1 649 181 118 0 chr10 69232667 69232811 -76356477 - LTR47A LTR ERVL -31 421 261 837 218 32 50 chr10 69233101 69233321 -76355967 - MER20 DNA MER1_type 0 219 4 277 294 49 10 chr10 69233574 69233676 -76355612 - MER5C DNA MER1_type -13 311 206 23 0 0 0 chr10 69233890 69233913 -76355375 + AT_rich Low_complexity Low_complexity 1 23 0 246 361 0 19 chr10 69233921 69234029 -76355259 - MIR SINE MIR -98 164 59 279 351 0 11 chr10 69234071 69234165 -76355123 + L2 LINE L2 3190 3282 -31 185 191 0 21 chr10 69234166 69234213 -76355075 + GA-rich Low_complexity Low_complexity 3 48 0 21 36 0 0 chr10 69234932 69234960 -76354328 + AT_rich Low_complexity Low_complexity 1 28 0 222 185 123 12 chr10 69235117 69235198 -76354090 + MIR SINE MIR 132 221 -41 1486 231 5 9 chr10 69235323 69235753 -76353535 + MER89 LTR ERV1 1 491 -68 1865 164 0 20 chr10 69236568 69236873 -76352415 + AluSx SINE Alu 1 299 -13 234 193 0 0 chr10 69237971 69238028 -76351260 + (TA)n Simple_repeat Simple_repeat 2 58 0 183 129 0 0 chr10 69238134 69238165 -76351123 + (CA)n Simple_repeat Simple_repeat 2 32 0 564 329 98 40 chr10 69238352 69238829 -76350459 - MLT1K LTR MaLR -5 583 79 24 32 0 0 chr10 69240454 69240485 -76348803 + AT_rich Low_complexity Low_complexity 1 31 0 4747 142 15 10 chr10 69240576 69241373 -76347915 + L1PA16 LINE L1 5366 6166 0 2178 86 0 0 chr10 69241823 69242141 -76347147 + AluSc SINE Alu 1 318 0 266 230 9 106 chr10 69242464 69242577 -76346711 + L1ME LINE L1 30 131 -5939 297 307 57 57 chr10 69243001 69243177 -76346111 + MIR SINE MIR 1 176 -86 3046 117 0 35 chr10 69243901 69244413 -76344875 - L1MA3 LINE L1 0 6305 5812 5725 160 9 26 chr10 69244809 69245178 -76344110 - L1PB2 LINE L1 -7 6860 6487 423 0 0 0 chr10 69245178 69245225 -76344063 + (TCTA)n Simple_repeat Simple_repeat 3 49 0 5725 160 9 26 chr10 69245225 69246754 -76342534 - L1PB2 LINE L1 -380 6487 4999 28774 112 22 3 chr10 69246754 69248846 -76340442 + HERVL LTR ERVL 1086 3137 -2517 2146 122 3 0 chr10 69248846 69249142 -76340146 - AluSx SINE Alu -15 297 1 28774 112 22 3 chr10 69249142 69251132 -76338156 + HERVL LTR ERVL 3137 5246 -408 189 295 0 64 chr10 69251132 69251210 -76338078 + MIR3 SINE MIR 12 84 -124 656 135 0 0 chr10 69251210 69251314 -76337974 + HERVL-B3 LTR ERVL 5325 5428 -226 260 107 0 160 chr10 69251309 69251384 -76337904 + HERVL-B3 LTR ERVL 5592 5654 0 * 2037 191 48 62 chr10 69251385 69251946 -76337342 + MLT2B3 LTR ERVL 2 554 0 15846 182 44 4 chr10 69251946 69256190 -76333098 - L1PB2 LINE L1 -2447 4415 1 5539 168 19 14 chr10 69256199 69257892 -76331396 - L1MA3 LINE L1 -475 5830 4127 228 390 39 32 chr10 69258011 69258165 -76331123 - MIR3 SINE MIR -31 177 23 358 319 72 53 chr10 69259070 69259751 -76329537 + HAL1 LINE L1 978 1671 -836 235 226 15 95 chr10 69259806 69259943 -76329345 + HAL1 LINE L1 2261 2386 -121 553 308 33 56 chr10 69260296 69260598 -76328690 + MER110-int LTR ERV1 4353 4647 0 418 284 77 18 chr10 69260912 69261081 -76328207 + MER110 LTR ERV1 306 484 -7 2283 71 30 0 chr10 69261177 69261472 -76327816 - AluY SINE Alu -7 304 1 224 196 147 49 chr10 69261714 69261816 -76327472 + L2 LINE L2 3201 3312 -1 887 116 55 20 chr10 69261918 69262064 -76327224 + AluSg1 SINE Alu 1 151 -158 1680 183 20 59 chr10 69262383 69262792 -76326496 - L1MA7 LINE L1 -9 6282 5890 4870 70 31 0 chr10 69264690 69265337 -76323951 - PABL_B LTR ERV1 0 667 1 23 86 0 0 chr10 69265558 69265616 -76323672 + AT_rich Low_complexity Low_complexity 1 58 0 21 0 0 0 chr10 69265823 69265844 -76323444 + AT_rich Low_complexity Low_complexity 1 21 0 39 38 0 0 chr10 69265907 69265960 -76323328 + AT_rich Low_complexity Low_complexity 1 53 0 1010 213 84 0 chr10 69267091 69267340 -76321948 + L1MC2 LINE L1 6066 6335 -9 417 328 75 70 chr10 69268028 69268654 -76320634 + HAL1 LINE L1 816 1444 -1063 233 286 0 0 chr10 69269124 69269180 -76320108 + LTR16C LTR ERVL 167 222 -269 276 289 114 0 chr10 69269237 69269351 -76319937 + LTR16C LTR ERVL 360 486 -5 1780 218 16 19 chr10 69270306 69270682 -76318606 + MER82 DNA MER2_type 278 652 -1 195 139 0 0 chr10 69270685 69270721 -76318567 + (TG)n Simple_repeat Simple_repeat 1 36 0 32 0 0 0 chr10 69270855 69270887 -76318401 + AT_rich Low_complexity Low_complexity 1 32 0 2703 17 0 0 chr10 69271222 69271524 -76317764 - AluYa5 SINE Alu -9 302 1 483 293 116 31 chr10 69271827 69272251 -76317037 - L1M4 LINE L1 -795 5351 4892 4977 192 32 15 chr10 69272531 69273840 -76315448 - L1MA7 LINE L1 0 6291 4938 2761 96 0 0 chr10 69273840 69274204 -76315084 - THE1B LTR MaLR 0 364 1 4977 192 32 15 chr10 69274204 69274893 -76314395 - L1MA7 LINE L1 -1353 4938 4262 918 241 46 50 chr10 69274890 69275329 -76313959 + L1 LINE L1 2738 3174 -2972 * 768 153 8 0 chr10 69275345 69275476 -76313812 + FLAM_C SINE Alu 11 142 -1 12773 173 25 53 chr10 69275491 69278955 -76310333 + L1MA1 LINE L1 15 3740 -3825 7922 191 52 6 chr10 69278928 69280671 -76308617 + L1MA1 LINE L1 4245 6067 -1498 * 636 136 0 9 chr10 69280665 69280775 -76308513 + L1MA1 LINE L1 7134 7242 -479 * 291 121 0 7 chr10 69280778 69280834 -76308454 - L1P4 LINE L1 -339 5827 5774 31 44 0 0 chr10 69280848 69280893 -76308395 + AT_rich Low_complexity Low_complexity 1 45 0 343 53 4 0 chr10 69280907 69280967 -76308321 - L1M3 LINE L1 -708 5446 5394 2956 97 17 13 chr10 69281016 69281482 -76307806 + L1MA1 LINE L1 7247 7714 -7 854 216 0 0 chr10 69281499 69281661 -76307627 + FRAM SINE Alu 1 154 -22 5091 180 32 11 chr10 69281677 69282729 -76306559 + L1 LINE L1 3177 4251 -1895 353 290 43 7 chr10 69282882 69283020 -76306268 - L1M4 LINE L1 -1977 4169 4027 * 42099 34 23 1 chr10 69283017 69288993 -76300295 + L1PA3 LINE L1 46 6155 0 719 294 31 22 chr10 69289047 69289370 -76299918 - L1M4 LINE L1 -2122 4024 3699 368 316 7 22 chr10 69289522 69289658 -76299630 - HAL1 LINE L1 -891 1616 1483 2076 113 0 13 chr10 69290485 69290785 -76298503 - AluSg SINE Alu -9 301 6 1790 104 64 54 chr10 69291303 69291601 -76297687 + AluSq SINE Alu 1 301 -12 438 275 96 5 chr10 69291879 69292097 -76297191 - L1M4 LINE L1 -1438 4708 4471 299 191 73 0 chr10 69292291 69292359 -76296929 - L1MC1 LINE L1 -5 6328 6256 1352 165 4 20 chr10 69292462 69292717 -76296571 - L1MC1 LINE L1 -103 6230 5980 206 311 210 17 chr10 69293057 69293176 -76296112 + MER5A DNA MER1_type 47 188 -1 341 353 124 24 chr10 69293253 69293624 -76295664 - L3 LINE CR1 -57 1520 1113 322 323 71 0 chr10 69293657 69293756 -76295532 - L2 LINE L2 -4 3268 3163 186 256 139 12 chr10 69293762 69293848 -76295440 - L3 LINE CR1 -492 1085 989 209 307 53 79 chr10 69295628 69295742 -76293546 + MIR SINE MIR 53 163 -99 1197 173 10 0 chr10 69295754 69295962 -76293326 - L1MA4A LINE L1 -423 5880 5671 2186 154 22 2 chr10 69295962 69296367 -76292921 + L1MA4A LINE L1 5881 6296 -7 27 0 0 0 chr10 69296575 69296602 -76292686 + AT_rich Low_complexity Low_complexity 1 27 0 2421 151 16 38 chr10 69297233 69297676 -76291612 + Tigger2a DNA MER2_type 1 433 -1 25 51 0 0 chr10 69298610 69298649 -76290639 + AT_rich Low_complexity Low_complexity 1 39 0 267 31 0 0 chr10 69298773 69298805 -76290483 + (CA)n Simple_repeat Simple_repeat 1 32 0 25 0 0 0 chr10 69299281 69299306 -76289982 + AT_rich Low_complexity Low_complexity 1 25 0 525 320 45 22 chr10 69299352 69299711 -76289577 - L1ME LINE L1 -346 5816 5450 513 253 199 34 chr10 69299730 69300138 -76289150 + L1M4 LINE L1 3505 3979 -2167 22 35 0 0 chr10 69300635 69300664 -76288624 + AT_rich Low_complexity Low_complexity 1 29 0 432 252 102 15 chr10 69300675 69300882 -76288406 - L1ME LINE L1 -358 5804 5587 29 70 0 0 chr10 69301107 69301164 -76288124 + AT_rich Low_complexity Low_complexity 1 57 0 286 289 94 39 chr10 69301235 69301415 -76287873 - L1MEd LINE L1 -5368 751 562 668 162 0 1 chr10 69301905 69302022 -76287266 + L1MA4 LINE L1 5680 5795 -356 292 226 0 0 chr10 69301999 69302061 -76287227 - L1M1 LINE L1 -605 5700 5639 * 1440 167 7 0 chr10 69302062 69302331 -76286957 + L1MA4 LINE L1 6022 6292 -8 4984 169 43 19 chr10 69302877 69304288 -76285000 + L1PA16 LINE L1 4747 6165 -1 1257 98 37 5 chr10 69304317 69304531 -76284757 + L1MA4 LINE L1 6071 6291 -9 218 407 25 0 chr10 69305566 69305684 -76283604 - L2 LINE L2 -10 3303 3183 1926 121 28 3 chr10 69306094 69306383 -76282905 - AluSq SINE Alu -17 296 1 195 69 0 0 chr10 69306394 69306423 -76282865 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 1072 146 0 0 chr10 69306433 69306591 -76282697 - AluSg/x SINE Alu -18 294 137 8037 170 13 31 chr10 69306597 69309257 -76280031 - L1PB1 LINE L1 0 6151 3544 273 357 69 30 chr10 69309368 69309729 -76279559 + L2 LINE L2 2355 2729 -585 867 291 51 6 chr10 69309757 69310070 -76279218 - L1ME3A LINE L1 -293 5877 5551 417 345 120 10 chr10 69311136 69311345 -76277943 + MIR SINE MIR 24 255 -7 21 36 0 0 chr10 69311404 69311432 -76277856 + AT_rich Low_complexity Low_complexity 1 28 0 1877 126 0 4 chr10 69311537 69311806 -76277482 + AluSg SINE Alu 24 291 -19 290 277 0 12 chr10 69311936 69312019 -76277269 + (TA)n Simple_repeat Simple_repeat 2 83 0 270 191 11 34 chr10 69312030 69312119 -76277169 + (TATG)n Simple_repeat Simple_repeat 2 88 0 351 347 40 6 chr10 69312883 69313206 -76276082 + L1M4 LINE L1 4961 5294 -852 29 70 0 0 chr10 69413289 69413346 -76175942 + AT_rich Low_complexity Low_complexity 1 57 0 206 275 0 8 chr10 69413894 69414025 -76175263 + (TA)n Simple_repeat Simple_repeat 2 131 0 405 54 0 0 chr10 69414388 69414444 -76174844 + (GA)n Simple_repeat Simple_repeat 1 56 0 29 0 0 0 chr10 69414494 69414523 -76174765 + AT_rich Low_complexity Low_complexity 1 29 0 394 273 43 14 chr10 69414545 69414684 -76174604 + L1MC5 LINE L1 7765 7907 -54 183 302 68 37 chr10 69415085 69415264 -76174024 + L2 LINE L2 1137 1321 -1993 211 292 92 0 chr10 69415292 69415357 -76173931 + L2 LINE L2 2712 2782 -532 238 338 0 0 chr10 69416349 69416426 -76172862 - MIR SINE MIR -116 146 70 21 71 0 0 chr10 69417312 69417354 -76171934 + AT_rich Low_complexity Low_complexity 1 42 0 385 303 133 18 chr10 69417360 69417525 -76171763 - MIR SINE MIR -56 206 23 327 49 0 0 chr10 69417937 69417978 -76171310 + (TG)n Simple_repeat Simple_repeat 2 42 0 236 30 30 0 chr10 69418661 69418694 -76170594 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 22 35 0 0 chr10 69418791 69418820 -76170468 + AT_rich Low_complexity Low_complexity 1 29 0 377 316 132 31 chr10 69419745 69419917 -76169371 - L1M4 LINE L1 -1196 4950 4748 2054 130 42 33 chr10 69419917 69420278 -76169010 + THE1B LTR MaLR 1 364 0 377 316 132 31 chr10 69420278 69420333 -76168955 - L1M4 LINE L1 -1398 4748 4700 437 208 110 85 chr10 69420336 69420572 -76168716 - L1M4 LINE L1 -1487 4659 4418 723 248 81 30 chr10 69420641 69421146 -76168142 + LTR28 LTR ERV1 1 1300 -23 227 370 59 7 chr10 69422483 69422618 -76166670 + MIR SINE MIR 12 153 -109 303 231 21 153 chr10 69422861 69423194 -76166094 - L1MC5 LINE L1 -766 7195 6907 346 276 104 15 chr10 69423194 69423328 -76165960 - LTR16B LTR ERVL 0 464 319 1336 308 55 35 chr10 69423606 69424230 -76165058 - HERV16 LTR ERVL -2658 2338 1703 539 201 104 31 chr10 69424312 69424513 -76164775 + MLT1E1 LTR MaLR 45 272 -376 5063 72 21 48 chr10 69425045 69425808 -76163480 - MER4E LTR ERV1 -23 743 2 24 85 0 0 chr10 69425884 69425943 -76163345 + AT_rich Low_complexity Low_complexity 1 59 0 644 333 40 30 chr10 69426199 69426602 -76162686 + L1MEc LINE L1 22 428 -5968 484 174 11 11 chr10 69426638 69426730 -76162558 - LTR49 LTR ERV1 0 595 504 882 291 67 42 chr10 69426873 69427279 -76162009 + LTR33 LTR ERVL 41 456 -65 188 185 19 0 chr10 69427380 69427434 -76161854 + (CATA)n Simple_repeat Simple_repeat 4 58 0 1278 292 126 41 chr10 69427756 69428079 -76161209 + HAL1 LINE L1 557 851 -1656 183 42 0 0 chr10 69428079 69428103 -76161185 + (CAAA)n Simple_repeat Simple_repeat 3 26 0 1278 292 126 41 chr10 69428103 69428868 -76160420 + HAL1 LINE L1 851 1737 -770 1404 109 0 0 chr10 69428968 69429171 -76160117 + AluSg/x SINE Alu 97 299 0 326 340 57 3 chr10 69429631 69429913 -76159375 - L1ME LINE L1 -288 5833 5537 3958 180 19 21 chr10 69430622 69431368 -76157920 + Tigger7 DNA MER2_type 12 755 -1732 348 83 0 0 chr10 69432716 69432764 -76156524 + (T)n Simple_repeat Simple_repeat 1 48 0 45 45 0 0 chr10 69434237 69434303 -76154985 + AT_rich Low_complexity Low_complexity 1 66 0 322 376 62 19 chr10 69434905 69435067 -76154221 - MER91A DNA MER1_type -26 170 2 277 404 105 22 chr10 69437515 69438050 -76151238 - L2 LINE L2 -1217 2097 1519 1654 187 3 19 chr10 69438264 69438579 -76150709 + AluJo SINE Alu 1 310 -2 905 234 8 43 chr10 69440355 69440590 -76148698 - MLT2B2 LTR ERVL -11 504 278 269 229 33 0 chr10 69441453 69441514 -76147774 - MER94 DNA DNA 0 134 72 21 0 0 0 chr10 69442597 69442618 -76146670 + AT_rich Low_complexity Low_complexity 1 21 0 1438 237 77 14 chr10 69443147 69443709 -76145579 - MER114 LTR ERV 0 648 52 26 101 0 0 chr10 69443972 69444061 -76145227 + AT_rich Low_complexity Low_complexity 1 89 0 375 250 10 10 chr10 69444204 69444300 -76144988 + MER77 LTR ERV1 504 599 -6 1519 226 198 16 chr10 69444830 69445269 -76144019 + LTR53 LTR ERVL 1 519 0 732 299 142 29 chr10 69447778 69448397 -76140891 + L2 LINE L2 2603 3309 -4 433 236 27 9 chr10 69448696 69448806 -76140482 - MIR SINE MIR -37 225 114 1178 223 39 34 chr10 69448867 69449222 -76140066 - L1ME1 LINE L1 -5 6161 5805 195 100 0 0 chr10 69449810 69449840 -76139448 + (CA)n Simple_repeat Simple_repeat 1 30 0 1762 318 25 12 chr10 69450078 69450725 -76138563 + L1MCc LINE L1 17 671 -5752 382 97 42 0 chr10 69450964 69451036 -76138252 + CT-rich Low_complexity Low_complexity 5 79 0 1128 263 81 40 chr10 69451055 69451789 -76137499 - L1MCc LINE L1 -4887 1536 1104 2260 89 0 0 chr10 69451844 69452186 -76137102 + AluY SINE Alu 1 342 0 801 273 130 45 chr10 69452188 69452566 -76136722 - LTR16A1 LTR ERVL -41 416 7 319 336 71 18 chr10 69452905 69453018 -76136270 + MIR SINE MIR 34 141 -67 22 35 0 0 chr10 69453426 69453455 -76135833 + AT_rich Low_complexity Low_complexity 1 29 0 304 298 53 30 chr10 69453885 69454016 -76135272 - MIR SINE MIR -8 254 121 24 67 0 0 chr10 69454188 69454233 -76135055 + AT_rich Low_complexity Low_complexity 1 45 0 337 143 39 26 chr10 69454387 69454464 -76134824 - MER116 DNA Mariner -2 78 1 277 186 57 43 chr10 69454604 69454674 -76134614 - MLT1H1 LTR MaLR -31 524 454 358 241 60 0 chr10 69455618 69455751 -76133537 - L1ME1 LINE L1 -9 6157 6017 979 212 5 5 chr10 69455753 69455946 -76133342 + AluJo SINE Alu 3 195 -117 2045 113 0 3 chr10 69455972 69456285 -76133003 + AluSx SINE Alu 1 312 0 1365 61 0 22 chr10 69456645 69456826 -76132462 - MER107 DNA MER1_type -18 179 3 224 315 120 60 chr10 69456984 69457168 -76132120 - L2 LINE L2 -926 2388 2194 297 0 0 0 chr10 69459014 69459047 -76130241 + (TG)n Simple_repeat Simple_repeat 1 33 0 1228 115 44 0 chr10 69459725 69459907 -76129381 - MER4E LTR ERV1 0 766 577 1154 130 0 0 chr10 69459913 69460082 -76129206 + AluSq SINE Alu 144 312 -1 8491 114 3 35 chr10 69460091 69461416 -76127872 + HSMAR1 DNA Mariner 1 1283 -4 1777 174 78 37 chr10 69461419 69461827 -76127461 - MER4B LTR ERV1 -185 425 1 2179 126 0 0 chr10 69462175 69462477 -76126811 + AluSx SINE Alu 1 302 -10 410 261 33 0 chr10 69462878 69462970 -76126318 - MLT1G1 LTR MaLR -493 102 8 842 150 8 0 chr10 69462971 69463104 -76126184 + MLT1G LTR MaLR 457 590 0 319 140 0 0 chr10 69463575 69463625 -76125663 - Alu SINE Alu -3 298 249 346 263 65 68 chr10 69463725 69464018 -76125270 + L1M4 LINE L1 4172 4463 -1683 2841 219 21 33 chr10 69464025 69464723 -76124565 + Tigger6a DNA MER2_type 1 690 -393 5712 106 142 183 chr10 69464804 69466296 -76122992 - pTR5 LTR ERV1 0 2606 1524 339 25 0 0 chr10 69467083 69467123 -76122165 + (CAT)n Simple_repeat Simple_repeat 2 41 0 436 295 36 0 chr10 69467155 69467294 -76121994 - MIR SINE MIR -30 232 89 224 340 93 0 chr10 69467326 69467423 -76121865 - MIR SINE MIR -155 107 2 248 313 20 82 chr10 69467472 69467619 -76121669 + MIR3 SINE MIR 66 203 -5 315 0 0 0 chr10 69467875 69467910 -76121378 + (CA)n Simple_repeat Simple_repeat 2 36 0 8696 181 14 15 chr10 69467912 69468955 -76120333 - ERVL-D LTR ERVL -344 5420 4379 8074 58 3 1 chr10 69468955 69469922 -76119366 + LTR5 LTR ERVK 1 969 0 8696 181 14 15 chr10 69469922 69470438 -76118850 - ERVL-D LTR ERVL -1385 4379 3864 723 253 11 26 chr10 69470434 69470624 -76118664 - ERVL-D LTR ERVL -2502 3262 3076 * 620 209 91 4 chr10 69470683 69470969 -76118319 - MER93b LTR ERV1 -11 362 21 767 228 136 9 chr10 69470986 69471214 -76118074 - ERVL-D LTR ERVL -5506 258 2 362 83 0 0 chr10 69471215 69471263 -76118025 - MLT2D LTR ERVL 0 414 367 254 264 0 22 chr10 69471289 69471380 -76117908 - L1MC4 LINE L1 -1340 6702 6614 342 194 0 0 chr10 69471427 69471499 -76117789 + (TA)n Simple_repeat Simple_repeat 2 73 0 1073 227 42 9 chr10 69471524 69471828 -76117460 - MLT2D LTR ERVL -41 479 65 2210 174 28 16 chr10 69472106 69472530 -76116758 - MSTB1 LTR MaLR -3 429 1 223 315 45 22 chr10 69472754 69472843 -76116445 - L2 LINE L2 -24 3289 3199 200 224 15 0 chr10 69473132 69473199 -76116089 + (CTA)n Simple_repeat Simple_repeat 1 68 0 341 318 128 10 chr10 69473532 69473727 -76115561 + MIR SINE MIR 42 259 -3 320 253 12 12 chr10 69474216 69474299 -76114989 + MLT1F LTR MaLR 1 83 -459 365 227 57 0 chr10 69474591 69474679 -76114609 + MLT1H1 LTR MaLR 463 555 0 407 331 54 35 chr10 69474722 69474982 -76114306 - L3 LINE CR1 -10 1567 1303 2270 109 0 0 chr10 69476125 69476418 -76112870 - AluSx SINE Alu -19 293 1 245 262 182 56 chr10 69476797 69477011 -76112277 - Tigger8 DNA MER2_type -257 409 169 356 304 35 0 chr10 69477209 69477324 -76111964 - MIR SINE MIR -122 140 22 191 340 0 0 chr10 69477351 69477401 -76111887 + MIR SINE MIR 36 85 -123 289 225 14 14 chr10 69478103 69478174 -76111114 + Tigger2a DNA MER2_type 3 73 -361 643 268 48 6 chr10 69478209 69478377 -76110911 - MER8 DNA MER2_type -64 175 1 259 309 60 0 chr10 69479140 69479224 -76110064 - L2 LINE L2 -4 3268 3180 21 0 0 0 chr10 69481306 69481327 -76107961 + AT_rich Low_complexity Low_complexity 1 21 0 199 325 72 12 chr10 69481385 69481468 -76107820 - L2 LINE L2 -18 3295 3208 2220 157 11 13 chr10 69481728 69482105 -76107183 + MLT2D LTR ERVL 1 376 -38 331 343 118 22 chr10 69482424 69482780 -76106508 - L2 LINE L2 -940 2374 1985 439 301 9 0 chr10 69482902 69483015 -76106273 + MER81 DNA DNA 1 114 0 231 323 21 109 chr10 69483144 69483336 -76105952 - L2 LINE L2 -2887 427 253 198 0 0 0 chr10 69485051 69485073 -76104215 + (T)n Simple_repeat Simple_repeat 1 22 0 2206 93 0 0 chr10 69485437 69485715 -76103573 - AluY SINE Alu -33 278 1 2424 159 14 16 chr10 69485718 69486153 -76103135 - Tigger2a DNA MER2_type 0 434 1 1683 186 18 15 chr10 69486153 69486486 -76102802 + ERVL-D LTR ERVL 5431 5764 0 756 201 86 6 chr10 69486332 69486506 -76102782 + Ricksha DNA DNA 185 372 -1674 * 916 236 25 25 chr10 69486506 69486743 -76102545 + MLT2D LTR ERVL 82 318 -96 207 0 0 0 chr10 69487590 69487613 -76101675 + (CAA)n Simple_repeat Simple_repeat 2 24 0 5569 127 20 20 chr10 69488239 69489206 -76100082 - MER11C LTR ERVK -14 1057 1 2790 132 54 17 chr10 69489514 69489992 -76099296 - MER7C DNA MER2_type -1 601 106 227 217 0 0 chr10 69490053 69490099 -76099189 + (TA)n Simple_repeat Simple_repeat 1 46 0 428 77 0 0 chr10 69491376 69491444 -76097844 + MER34C LTR ERV1 12 98 -463 969 106 0 0 chr10 69491463 69491595 -76097693 + AluYb8 SINE Alu 1 132 -186 1390 200 79 83 chr10 69491602 69491966 -76097322 + MER34 LTR ERV1 82 445 -97 2445 125 14 8 chr10 69491966 69492335 -76096953 + THE1C LTR MaLR 4 374 -1 1390 200 79 83 chr10 69492335 69492425 -76096863 + MER34 LTR ERV1 445 534 -8 371 231 17 26 chr10 69492460 69492577 -76096711 + LTR33 LTR ERVL 386 501 -20 25 0 0 0 chr10 69492766 69492791 -76096497 + AT_rich Low_complexity Low_complexity 1 25 0 1267 178 70 49 chr10 69492818 69493105 -76096183 + MSTD LTR MaLR 104 396 0 319 371 0 0 chr10 69493116 69493232 -76096056 + L2 LINE L2 3138 3253 -19 4683 89 38 16 chr10 69494118 69494800 -76094488 + MER4E LTR ERV1 3 699 -67 227 346 135 29 chr10 69494923 69495302 -76093986 + L2 LINE L2 2544 2962 -352 267 355 23 12 chr10 69495484 69495656 -76093632 - L1ME LINE L1 -423 5698 5525 27 49 0 0 chr10 69495950 69495991 -76093297 + AT_rich Low_complexity Low_complexity 1 41 0 25 31 0 0 chr10 69496426 69496458 -76092830 + AT_rich Low_complexity Low_complexity 1 32 0 2183 79 0 44 chr10 69497468 69497786 -76091502 - AluSc SINE Alu -5 304 1 611 262 112 0 chr10 69497924 69498138 -76091150 + MER33 DNA MER1_type 9 246 -78 863 58 0 0 chr10 69498154 69498258 -76091030 + AluYa5 SINE Alu 104 207 -104 1949 266 22 33 chr10 69498754 69499385 -76089903 + MLT1E2 LTR MaLR 3 626 0 354 430 25 13 chr10 69499391 69499707 -76089581 + L1MEc LINE L1 888 1207 -5931 2164 137 0 0 chr10 69499867 69500174 -76089114 + AluSx SINE Alu 6 312 0 361 275 83 33 chr10 69500221 69500556 -76088732 + L1MEc LINE L1 1331 1711 -5236 435 185 0 0 chr10 69500862 69500954 -76088334 + GA-rich Low_complexity Low_complexity 2 93 0 785 248 42 61 chr10 69501089 69501351 -76087937 + MLT1E LTR MaLR 337 593 0 249 396 10 5 chr10 69501357 69501451 -76087837 - MIR SINE MIR -62 146 57 2186 55 3 71 chr10 69501451 69501762 -76087526 - AluY SINE Alu -1 310 21 249 396 10 5 chr10 69501762 69501806 -76087482 - MIR SINE MIR -151 57 15 2366 93 0 0 chr10 69501838 69502149 -76087139 - AluY SINE Alu 0 311 1 281 284 31 55 chr10 69502158 69502285 -76087003 - MIR SINE MIR -13 249 126 2020 172 5 32 chr10 69502477 69502849 -76086439 - THE1B LTR MaLR 0 364 3 11104 104 17 1 chr10 69502851 69504405 -76084883 - THE1B-int LTR MaLR 0 1580 1 2221 139 8 32 chr10 69504405 69504778 -76084510 - THE1B LTR MaLR 0 364 1 30 59 0 0 chr10 69504950 69505001 -76084287 + AT_rich Low_complexity Low_complexity 1 51 0 2484 43 7 3 chr10 69505192 69505494 -76083794 - AluY SINE Alu -8 303 1 3391 111 2 64 chr10 69505719 69506296 -76082992 - L1PB1 LINE L1 0 6151 5611 14144 102 16 17 chr10 69506535 69508628 -76080660 + L1PA6 LINE L1 465 2555 -3591 822 88 9 0 chr10 69508632 69508745 -76080543 + L1P LINE L1 3988 4101 -2045 21133 68 0 2 chr10 69508745 69512340 -76076948 + L1PA6 LINE L1 2554 6151 -3 36 0 0 0 chr10 69512843 69512879 -76076409 + AT_rich Low_complexity Low_complexity 1 36 0 31 102 0 0 chr10 69513081 69513189 -76076099 + AT_rich Low_complexity Low_complexity 1 108 0 25 0 0 0 chr10 69513312 69513337 -76075951 + AT_rich Low_complexity Low_complexity 1 25 0 3073 76 0 0 chr10 69513770 69514178 -76075110 - L1PA4 LINE L1 -4 6151 5744 1430 224 21 9 chr10 69514309 69514639 -76074649 - Tigger6 DNA MER2_type -749 334 1 1812 248 58 69 chr10 69514646 69515251 -76074037 - L1ME LINE L1 -1683 4397 3806 1976 136 0 11 chr10 69515251 69515578 -76073710 + AluSq SINE Alu 1 324 0 1812 248 58 69 chr10 69515578 69516008 -76073280 - L1ME LINE L1 -2274 3806 3373 695 219 70 45 chr10 69516073 69516273 -76073015 - L1ME LINE L1 -2717 3363 3149 2241 83 3 59 chr10 69516273 69516597 -76072691 - AluY SINE Alu -5 306 1 695 219 70 45 chr10 69516597 69516753 -76072535 - L1ME LINE L1 -2931 3149 2998 1464 248 69 4 chr10 69516776 69517269 -76072019 - L1ME LINE L1 -3460 2620 2096 504 288 7 14 chr10 69517327 69517473 -76071815 + MER58B DNA MER1_type 197 341 0 1548 250 109 52 chr10 69517595 69517746 -76071542 - L1ME LINE L1 -4476 1604 1463 1525 191 18 11 chr10 69517746 69518028 -76071260 - AluJb SINE Alu -18 294 11 1548 250 109 52 chr10 69518028 69518921 -76070367 - L1ME LINE L1 -4617 1463 529 333 374 61 52 chr10 69519045 69519355 -76069933 - L1ME LINE L1 -5573 497 185 425 319 95 31 chr10 69519604 69519961 -76069327 - LTR34 LTR ERV1 -3 696 317 280 364 7 7 chr10 69520196 69520339 -76068949 - L1ME LINE L1 -5921 149 7 2167 106 3 3 chr10 69521009 69521302 -76067986 - AluSc SINE Alu -13 296 4 795 76 42 0 chr10 69521601 69521719 -76067569 - MER4E LTR ERV1 0 766 644 232 379 58 0 chr10 69522475 69522578 -76066710 + MIR SINE MIR 42 150 -58 292 340 48 27 chr10 69523797 69523944 -76065344 - MER5A DNA MER1_type -1 188 39 1947 143 7 0 chr10 69524359 69524653 -76064635 - AluSp SINE Alu -15 298 3 1090 208 89 53 chr10 69524863 69525224 -76064064 + MLT1A2 LTR MaLR 1 374 0 21 71 0 0 chr10 69525358 69525400 -76063888 + AT_rich Low_complexity Low_complexity 1 42 0 345 328 79 44 chr10 69526250 69526592 -76062696 + L1M4 LINE L1 4206 4559 -1587 1998 78 9 47 chr10 69527448 69527768 -76061520 - AluY SINE Alu -3 308 1 23 0 0 0 chr10 69527769 69527792 -76061496 + AT_rich Low_complexity Low_complexity 1 23 0 247 340 28 28 chr10 69528456 69528562 -76060726 - MIR SINE MIR -18 244 139 5669 121 13 2 chr10 69528878 69530465 -76058823 + L1PA13 LINE L1 4530 6162 -1 1454 216 40 11 chr10 69531283 69531662 -76057626 + MLT1B LTR MaLR 1 390 0 33 0 0 0 chr10 69532965 69532998 -76056290 + AT_rich Low_complexity Low_complexity 1 33 0 263 140 0 0 chr10 69534893 69534943 -76054345 + L1MC4 LINE L1 6654 6703 -1339 980 136 0 0 chr10 69534945 69535085 -76054203 - AluSg/x SINE Alu -16 294 155 248 333 117 0 chr10 69536152 69536263 -76053025 - MIR SINE MIR -58 150 27 263 264 154 0 chr10 69536647 69536757 -76052531 + L2 LINE L2 3111 3237 -76 235 314 81 0 chr10 69537715 69537801 -76051487 - L2 LINE L2 -46 3226 3134 328 192 112 88 chr10 69538125 69538250 -76051038 - MER94 DNA DNA -1 133 6 24 0 0 0 chr10 69539060 69539084 -76050204 + AT_rich Low_complexity Low_complexity 1 24 0 264 129 94 0 chr10 69539097 69539182 -76050106 + (TA)n Simple_repeat Simple_repeat 1 93 0 759 153 51 57 chr10 69539233 69539390 -76049898 + MLT1A1 LTR MaLR 1 156 -209 2270 196 54 8 chr10 69539396 69539932 -76049356 - L1P LINE L1 -2655 3491 2931 1299 89 26 0 chr10 69539932 69540122 -76049166 + L1PA13 LINE L1 5968 6162 -1 1011 208 37 28 chr10 69540122 69540338 -76048950 + MLT1A1 LTR MaLR 148 365 0 27 49 0 0 chr10 69540850 69540891 -76048397 + AT_rich Low_complexity Low_complexity 1 41 0 9065 48 8 1 chr10 69541874 69543786 -76045502 - L1PA5 LINE L1 -8 6146 4227 2294 216 15 37 chr10 69543885 69544403 -76044885 + MER67D LTR ERV1 8 514 0 21 71 0 0 chr10 69544530 69544572 -76044716 + AT_rich Low_complexity Low_complexity 1 42 0 202 286 0 0 chr10 69544591 69544647 -76044641 + (TATATG)n Simple_repeat Simple_repeat 2 57 0 1221 204 23 106 chr10 69545570 69545968 -76043320 - MLT1A1 LTR MaLR 0 365 1 209 313 187 33 chr10 69546975 69547125 -76042163 + MIR SINE MIR 31 203 -59 12096 35 0 0 chr10 69547390 69549617 -76039671 + L1PA3 LINE L1 3929 6155 0 1315 225 74 6 chr10 69550275 69550613 -76038675 - MLT1A1 LTR MaLR -4 361 1 615 140 34 28 chr10 69550870 69551049 -76038239 + GA-rich Low_complexity Low_complexity 1 180 0 23 54 0 0 chr10 69551632 69551669 -76037619 + AT_rich Low_complexity Low_complexity 1 37 0 27 92 0 0 chr10 69552735 69552811 -76036477 + AT_rich Low_complexity Low_complexity 1 76 0 22 35 0 0 chr10 69553689 69553718 -76035570 + AT_rich Low_complexity Low_complexity 1 29 0 1396 120 0 5 chr10 69553832 69554032 -76035256 - AluSx SINE Alu -113 199 1 743 248 100 31 chr10 69556224 69556283 -76033005 - MER33 DNA MER1_type -2267 318 265 1644 55 0 0 chr10 69556283 69556484 -76032804 - AluY SINE Alu -7 304 104 743 248 100 31 chr10 69556484 69556714 -76032574 - MER33 DNA MER1_type -2320 265 9 2065 91 0 44 chr10 69556852 69557170 -76032118 + AluSc SINE Alu 1 304 -5 904 78 157 0 chr10 69557440 69557606 -76031682 - L1P5 LINE L1 -659 5495 5304 * 4976 231 49 10 chr10 69557601 69559006 -76030282 - L1 LINE L1 -2399 3747 2288 618 228 17 17 chr10 69559017 69559197 -76030091 - L1M4 LINE L1 -3241 2905 2726 283 351 5 43 chr10 69559241 69559426 -76029862 - L1MCc LINE L1 -5957 466 289 281 316 25 13 chr10 69559436 69559594 -76029694 - L1MCc LINE L1 -6248 175 16 1757 94 12 0 chr10 69559723 69559977 -76029311 - HERVL LTR ERVL -4392 1262 1006 * 20390 79 17 1 chr10 69559974 69562669 -76026619 - HERVL LTR ERVL -2914 2740 2 262 71 143 0 chr10 69562691 69562733 -76026555 - MLT2A2 LTR ERVL -405 48 1 738 234 7 0 chr10 69562886 69563027 -76026261 + Tigger3(Golem) DNA MER2_type 1 142 -2887 * 1383 168 51 19 chr10 69563023 69563279 -76026009 + Tigger3(Golem) DNA MER2_type 2765 3028 -1 353 302 95 20 chr10 69563494 69563746 -76025542 - L1ME LINE L1 -318 5803 5533 21 0 0 0 chr10 69565516 69565537 -76023751 + AT_rich Low_complexity Low_complexity 1 21 0 9959 171 35 14 chr10 69565704 69565865 -76023423 - L1MA3 LINE L1 0 6305 6149 1978 144 13 0 chr10 69565865 69566163 -76023125 - AluSx SINE Alu -10 302 1 9959 171 35 14 chr10 69566163 69567775 -76021513 - L1MA3 LINE L1 -156 6149 4427 315 0 0 0 chr10 69567775 69567810 -76021478 + (TG)n Simple_repeat Simple_repeat 2 36 0 9959 171 35 14 chr10 69567810 69569268 -76020020 - L1MA3 LINE L1 -1878 4427 3002 21951 73 6 7 chr10 69569377 69572222 -76017066 + HERVL LTR ERVL 2452 5293 -361 25 0 0 0 chr10 69572442 69572467 -76016821 + AT_rich Low_complexity Low_complexity 1 25 0 296 278 31 10 chr10 69572721 69572818 -76016470 - ERVL LTR ERVL -3274 2490 2392 633 297 187 0 chr10 69572928 69573174 -76016114 + L2 LINE L2 2924 3215 -98 963 211 11 0 chr10 69573229 69573409 -76015879 + MER5A DNA MER1_type 3 184 -5 337 387 16 29 chr10 69573455 69573698 -76015590 - ERVL LTR ERVL -3460 2194 1955 418 284 8 8 chr10 69574675 69574802 -76014486 - MIR SINE MIR -46 216 90 457 338 76 0 chr10 69575773 69575971 -76013317 + MIR SINE MIR 47 259 -3 647 191 43 0 chr10 69576142 69576283 -76013005 - MER41A LTR ERV1 -16 538 392 44 20 0 0 chr10 69577089 69577140 -76012148 + AT_rich Low_complexity Low_complexity 1 51 0 216 320 53 0 chr10 69577834 69577909 -76011379 - L2 LINE L2 0 3313 3235 29 28 0 0 chr10 69579480 69579516 -76009772 + AT_rich Low_complexity Low_complexity 1 36 0 22 113 0 0 chr10 69579690 69579796 -76009492 + AT_rich Low_complexity Low_complexity 1 106 0 252 203 54 27 chr10 69579888 69579962 -76009326 + L1MEd LINE L1 2 77 -6042 32 81 0 0 chr10 69579966 69580040 -76009248 + AT_rich Low_complexity Low_complexity 1 74 0 227 271 14 0 chr10 69580152 69580222 -76009066 - L1M4 LINE L1 -1807 4339 4269 543 239 9 0 chr10 69580230 69580339 -76008949 + MSTB1 LTR MaLR 1 110 -322 311 231 28 20 chr10 69580555 69580723 -76008565 + L1MC4 LINE L1 7598 8032 -10 21 0 0 0 chr10 69581115 69581136 -76008152 + AT_rich Low_complexity Low_complexity 1 21 0 212 246 33 0 chr10 69581252 69581313 -76007975 + (TA)n Simple_repeat Simple_repeat 1 63 0 337 359 28 0 chr10 69581397 69581539 -76007749 + L2 LINE L2 675 820 -2494 206 325 60 0 chr10 69582115 69582198 -76007090 - L2 LINE L2 -2 3270 3183 3218 47 1 8 chr10 69582238 69582673 -76006615 + L1PA4 LINE L1 5724 6155 0 22676 51 2 0 chr10 69582729 69586400 -76002888 + L1PA4 LINE L1 2483 6155 0 23 68 0 0 chr10 69587749 69587793 -76001495 + AT_rich Low_complexity Low_complexity 1 44 0 463 260 154 12 chr10 69588187 69588356 -76000932 - L1MD3 LINE L1 -464 7531 7339 316 286 134 82 chr10 69588816 69589047 -76000241 + L2 LINE L2 3029 3271 -1 11801 174 25 12 chr10 69589842 69591841 -75997447 + L1M1 LINE L1 21 2046 -5519 1031 110 32 0 chr10 69591952 69592107 -75997181 + MLT2A2 LTR ERVL 294 453 0 360 165 33 0 chr10 69592535 69592626 -75996662 + (TA)n Simple_repeat Simple_repeat 1 94 0 779 150 0 8 chr10 69594104 69594231 -75995057 + MER101 LTR ERV1 11 136 -338 845 128 0 15 chr10 69694305 69694438 -75894850 - AluSc SINE Alu -178 131 1 2082 110 7 0 chr10 69694438 69694730 -75894558 - AluSx SINE Alu -18 294 1 254 259 120 19 chr10 69694731 69694839 -75894449 - MIR SINE MIR -46 216 98 441 371 63 22 chr10 69695716 69696161 -75893127 + L2 LINE L2 2851 3313 0 223 286 0 0 chr10 69696360 69696416 -75892872 - MIR SINE MIR -58 204 149 180 326 78 57 chr10 69696458 69696599 -75892689 - MIR SINE MIR -117 145 2 2321 206 24 51 chr10 69697151 69697660 -75891628 + LTR42 LTR ERVL 1 495 0 417 342 63 8 chr10 69697737 69697974 -75891314 + MIR SINE MIR 2 251 -11 246 307 10 50 chr10 69699044 69699145 -75890143 - L2 LINE L2 -1 3271 3175 21 36 0 0 chr10 69702062 69702090 -75887198 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr10 69703296 69703320 -75885968 + AT_rich Low_complexity Low_complexity 1 24 0 416 242 129 0 chr10 69703324 69703456 -75885832 + MIR SINE MIR 83 231 -31 * 460 259 0 9 chr10 69703453 69703561 -75885727 + L2 LINE L2 3206 3312 -1 30 45 0 0 chr10 69704602 69704646 -75884642 + AT_rich Low_complexity Low_complexity 1 44 0 23 33 0 0 chr10 69706434 69706464 -75882824 + AT_rich Low_complexity Low_complexity 1 30 0 208 226 0 48 chr10 69707541 69707603 -75881685 + GA-rich Low_complexity Low_complexity 1 59 0 861 200 12 0 chr10 69709096 69709266 -75880022 + AluSg/x SINE Alu 138 309 -1 721 257 0 0 chr10 69710384 69710532 -75878756 - MIR SINE MIR -81 181 34 1869 108 63 76 chr10 69711175 69711555 -75877733 - THE1C LTR MaLR 0 375 1 2383 95 22 38 chr10 69713118 69713488 -75875800 - THE1B LTR MaLR 0 364 1 1973 159 0 0 chr10 69713852 69714147 -75875141 - AluSx SINE Alu -17 295 1 332 192 52 29 chr10 69714335 69714507 -75874781 + (TA)n Simple_repeat Simple_repeat 1 176 0 813 296 33 61 chr10 69714586 69714895 -75874393 - L1ME LINE L1 -352 5818 5525 2185 93 4 0 chr10 69714895 69715173 -75874115 - AluSp SINE Alu -21 292 14 813 296 33 61 chr10 69715173 69715319 -75873969 - L1ME LINE L1 -645 5525 5376 349 281 97 42 chr10 69715340 69715578 -75873710 - L1ME LINE L1 -1853 4293 4043 395 275 62 26 chr10 69715650 69715843 -75873445 - L1ME LINE L1 -3313 2833 2634 * 1666 252 38 33 chr10 69715839 69716470 -75872818 - L1ME1 LINE L1 -139 6027 5394 595 255 119 4 chr10 69716494 69716772 -75872516 - L1ME1 LINE L1 -1072 5074 4765 3234 51 2 2 chr10 69717285 69717698 -75871590 - L1PA4 LINE L1 0 6155 5743 296 345 53 12 chr10 69717744 69717915 -75871373 + MIR SINE MIR 21 198 -64 2200 117 3 0 chr10 69717969 69718276 -75871012 - AluSg SINE Alu -2 308 1 446 279 139 0 chr10 69718629 69718794 -75870494 - LTR33A LTR ERVL -20 503 316 322 286 293 0 chr10 69720495 69720635 -75868653 + MIR SINE MIR 3 183 -79 554 261 38 62 chr10 69720834 69721045 -75868243 - MIR SINE MIR -54 208 3 21 0 0 0 chr10 69721194 69721215 -75868073 + AT_rich Low_complexity Low_complexity 1 21 0 413 323 118 17 chr10 69722251 69722548 -75866740 + MLT1L LTR MaLR 175 501 -114 301 299 80 29 chr10 69724905 69725042 -75864246 + L2 LINE L2 2193 2336 -978 775 279 0 80 chr10 69725065 69725316 -75863972 + MIR SINE MIR 2 232 -30 194 218 20 163 chr10 69725325 69725472 -75863816 + MIR SINE MIR 137 262 0 2512 57 0 10 chr10 69727303 69727617 -75861671 - AluY SINE Alu 0 311 1 303 330 41 0 chr10 69727691 69727788 -75861500 + MIR3 SINE MIR 99 199 -9 21 0 0 0 chr10 69728164 69728185 -75861103 + AT_rich Low_complexity Low_complexity 1 21 0 688 249 158 10 chr10 69729521 69729730 -75859558 - MIR SINE MIR -21 241 2 192 207 17 52 chr10 69729754 69729812 -75859476 - MIR3 SINE MIR -151 57 2 1803 105 0 8 chr10 69730700 69730963 -75858325 + AluSc SINE Alu 42 302 0 552 366 31 12 chr10 69731181 69731438 -75857850 + MIR SINE MIR 1 262 0 2042 86 0 11 chr10 69731468 69731747 -75857541 - AluY SINE Alu -1 310 35 338 324 77 8 chr10 69732140 69732326 -75856962 + MIR SINE MIR 36 232 -30 535 27 27 0 chr10 69733266 69733339 -75855949 + (TCTA)n Simple_repeat Simple_repeat 4 78 0 189 0 0 0 chr10 69733549 69733570 -75855718 + (TG)n Simple_repeat Simple_repeat 2 22 0 452 270 72 7 chr10 69734113 69734265 -75855023 + MIR SINE MIR 101 262 0 688 304 27 18 chr10 69734428 69734652 -75854636 + MIR SINE MIR 18 243 -19 207 69 0 0 chr10 69734813 69734842 -75854446 + (TCTCTG)n Simple_repeat Simple_repeat 2 30 0 23 54 0 0 chr10 69734925 69734962 -75854326 + AT_rich Low_complexity Low_complexity 1 37 0 278 290 0 0 chr10 69735845 69735914 -75853374 - MIR SINE MIR 0 262 194 458 312 26 7 chr10 69736027 69736181 -75853107 + MLT1I LTR MaLR 253 409 0 2551 60 0 13 chr10 69736401 69736716 -75852572 + AluY SINE Alu 1 311 0 324 342 96 15 chr10 69737627 69737826 -75851462 + MIR SINE MIR 28 242 -20 836 266 82 47 chr10 69737887 69738312 -75850976 - LTR16A1 LTR ERVL -2 455 16 621 255 0 7 chr10 69738281 69738426 -75850862 + MER20 DNA MER1_type 76 219 0 * 192 40 0 0 chr10 69738556 69738581 -75850707 + (CA)n Simple_repeat Simple_repeat 2 26 0 186 298 106 0 chr10 69739678 69739772 -75849516 - MIR3 SINE MIR 0 208 105 2335 72 0 3 chr10 69740147 69740439 -75848849 + AluY SINE Alu 1 291 -20 2075 148 22 3 chr10 69741193 69741564 -75847724 + L1MA8 LINE L1 5911 6288 -3 1729 187 150 47 chr10 69742415 69742881 -75846407 + MER67D LTR ERV1 1 514 0 33 25 0 0 chr10 69743351 69743391 -75845897 + AT_rich Low_complexity Low_complexity 1 40 0 325 333 8 0 chr10 69745757 69745880 -75843408 - L3b LINE CR1 -314 1269 1146 23 33 0 0 chr10 69745991 69746021 -75843267 + AT_rich Low_complexity Low_complexity 1 30 0 27 29 0 0 chr10 69746046 69746080 -75843208 + AT_rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr10 69747116 69747137 -75842151 + AT_rich Low_complexity Low_complexity 1 21 0 55 29 0 0 chr10 69747502 69747571 -75841717 + AT_rich Low_complexity Low_complexity 1 69 0 1881 295 192 11 chr10 69747704 69748643 -75840645 + L2 LINE L2 1894 3009 -304 257 304 0 14 chr10 69748767 69748836 -75840452 + L2 LINE L2 3203 3270 -2 238 162 27 0 chr10 69750291 69750365 -75838923 + (TA)n Simple_repeat Simple_repeat 2 77 0 348 318 133 17 chr10 69750385 69750558 -75838730 - MLT1I LTR MaLR -95 314 122 382 230 50 14 chr10 69751300 69751439 -75837849 - LTR67 LTR ERVL 0 557 414 255 322 169 0 chr10 69751703 69751821 -75837467 + MIR SINE MIR 20 157 -105 207 232 0 73 chr10 69752743 69752825 -75836463 - MIR SINE MIR -42 220 145 182 37 37 0 chr10 69753729 69753756 -75835532 + (CA)n Simple_repeat Simple_repeat 1 28 0 3650 168 41 44 chr10 69753793 69754581 -75834707 + LTR1 LTR ERV1 1 785 0 211 353 122 7 chr10 69754591 69754730 -75834558 + MIR SINE MIR 93 247 -15 1090 179 119 70 chr10 69754773 69755202 -75834086 - LTR7 LTR ERV1 0 450 1 629 285 40 44 chr10 69755573 69755822 -75833466 - MIR SINE MIR -14 248 1 340 272 89 38 chr10 69755851 69756009 -75833279 + MIR SINE MIR 46 211 -51 249 98 0 0 chr10 69756290 69756331 -75832957 + (TTTTTA)n Simple_repeat Simple_repeat 6 46 0 650 75 11 0 chr10 69756469 69756563 -75832725 + L1PA7 LINE L1 6057 6151 -3 330 326 63 48 chr10 69756678 69756948 -75832340 - L2 LINE L2 -815 2499 2226 764 296 33 88 chr10 69757056 69757546 -75831742 - MLT1J LTR MaLR -48 463 1 2224 171 11 0 chr10 69758207 69758582 -75830706 + L1PA16 LINE L1 5762 6140 -26 2129 77 42 3 chr10 69758582 69758867 -75830421 - AluY SINE Alu -15 296 1 1614 174 36 4 chr10 69759307 69759583 -75829705 + AluJb SINE Alu 2 286 -26 29686 88 5 5 chr10 69759593 69763712 -75825576 + L1PA5 LINE L1 3 4122 -2024 9657 57 0 0 chr10 69763812 69765811 -75823477 + L1PA5 LINE L1 4154 6152 -2 306 274 32 24 chr10 69766676 69766800 -75822488 + GA-rich Low_complexity Low_complexity 5 129 0 1836 160 7 10 chr10 69767602 69767896 -75821392 - AluSx SINE Alu -19 293 1 1088 252 78 51 chr10 69768314 69768687 -75820601 + L1M2c LINE L1 12 394 -6395 189 250 62 0 chr10 69768904 69768952 -75820336 - MIR SINE MIR -155 107 57 212 270 0 10 chr10 69769238 69769338 -75819950 + (TA)n Simple_repeat Simple_repeat 2 100 0 1951 47 16 0 chr10 69771175 69771430 -75817858 + L1PA7 LINE L1 5695 5953 -201 2060 130 33 0 chr10 69771544 69771844 -75817444 - AluSx SINE Alu -2 310 1 2141 108 0 0 chr10 69773117 69773405 -75815883 - AluY SINE Alu -23 288 1 24 0 0 0 chr10 69773928 69773952 -75815336 + AT_rich Low_complexity Low_complexity 1 24 0 564 246 88 9 chr10 69773963 69774178 -75815110 + L1ME4a LINE L1 5628 5859 -262 1619 180 54 7 chr10 69774258 69774552 -75814736 + AluJb SINE Alu 2 309 -3 11837 205 51 33 chr10 69774575 69777117 -75812171 + L1PA16 LINE L1 816 3311 -3558 393 144 33 89 chr10 69777117 69777207 -75812081 + MSTA LTR MaLR 342 426 -2 11837 205 51 33 chr10 69777207 69779692 -75809596 + L1PA16 LINE L1 3311 6078 -791 1797 206 79 2 chr10 69779692 69780085 -75809203 - MSTB LTR MaLR -3 423 1 11837 205 51 33 chr10 69780085 69780883 -75808405 + L1PA16 LINE L1 6078 6860 -9 23 97 0 0 chr10 69780998 69781070 -75808218 + AT_rich Low_complexity Low_complexity 1 72 0 347 308 0 0 chr10 69781504 69781595 -75807693 + GA-rich Low_complexity Low_complexity 3 93 0 278 287 85 16 chr10 69781597 69781726 -75807562 - MIR SINE MIR 0 262 125 414 285 62 0 chr10 69781785 69781929 -75807359 - MIR SINE MIR -14 248 96 511 302 72 45 chr10 69782069 69782291 -75806997 - MIR SINE MIR -1 261 34 724 201 7 20 chr10 69782913 69783098 -75806190 - L1M LINE L1 -805 5341 5181 23 33 0 0 chr10 69783130 69783160 -75806128 + AT_rich Low_complexity Low_complexity 1 30 0 2036 109 11 3 chr10 69783652 69783973 -75805315 + AluSx SINE Alu 1 323 0 21 0 0 0 chr10 69784634 69784655 -75804633 + AT_rich Low_complexity Low_complexity 1 21 0 302 304 12 27 chr10 69785169 69785413 -75803875 + GA-rich Low_complexity Low_complexity 1 240 0 2168 162 57 20 chr10 69785566 69786055 -75803233 + L1MA4A LINE L1 5789 6295 -8 23 0 0 0 chr10 69786323 69786346 -75802942 + AT_rich Low_complexity Low_complexity 1 23 0 2177 91 0 0 chr10 69786397 69786684 -75802604 + AluSc SINE Alu 1 287 -22 5409 155 47 17 chr10 69787312 69789329 -75799959 - L1MA5 LINE L1 0 6300 4233 667 113 9 0 chr10 69789351 69789457 -75799831 - L1MA3 LINE L1 0 6305 6199 886 138 8 0 chr10 69789597 69789756 -75799532 + L1MA3 LINE L1 5999 6175 -130 * 1075 195 0 5 chr10 69789755 69789960 -75799328 - L1MA5 LINE L1 -1904 4242 4039 21 36 0 0 chr10 69790020 69790048 -75799240 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr10 69790610 69790636 -75798652 + AT_rich Low_complexity Low_complexity 1 26 0 212 167 33 17 chr10 69791565 69791625 -75797663 + (TA)n Simple_repeat Simple_repeat 1 61 0 307 94 0 0 chr10 69792858 69792911 -75796377 - L1PB1 LINE L1 -1 6150 6098 273 196 0 0 chr10 69792912 69792968 -75796320 + (CATA)n Simple_repeat Simple_repeat 2 57 0 9264 197 9 18 chr10 69792984 69795687 -75793601 - L1P5 LINE L1 -360 5791 3115 642 192 0 0 chr10 69797591 69797737 -75791551 + G-rich Low_complexity Low_complexity 1 146 0 13341 195 34 50 chr10 69797743 69801379 -75787909 - L1M1 LINE L1 -525 6480 3007 1922 138 0 0 chr10 69801379 69801654 -75787634 - AluSg SINE Alu -25 285 11 13341 195 34 50 chr10 69801654 69804608 -75784680 - L1M1 LINE L1 -3998 3007 6 2013 125 10 0 chr10 69805376 69805672 -75783616 + AluSp SINE Alu 3 301 -12 422 141 172 0 chr10 69807618 69807717 -75781571 + L1MA8 LINE L1 6173 6288 -3 27 0 0 0 chr10 69808147 69808174 -75781114 + AT_rich Low_complexity Low_complexity 1 27 0 775 274 70 9 chr10 69808337 69808567 -75780721 - MIR SINE MIR -17 245 2 24 0 0 0 chr10 69808759 69808783 -75780505 + AT_rich Low_complexity Low_complexity 1 24 0 224 360 149 6 chr10 69809135 69809310 -75779978 + MIR SINE MIR 52 251 -11 23 0 0 0 chr10 69809336 69809359 -75779929 + AT_rich Low_complexity Low_complexity 1 23 0 882 298 83 22 chr10 69810134 69810543 -75778745 - MLT1J2 LTR MaLR -2 448 15 240 35 0 0 chr10 69810943 69810972 -75778316 + (TGG)n Simple_repeat Simple_repeat 1 29 0 220 198 25 86 chr10 69811394 69811475 -75777813 - MIR SINE MIR -1 261 186 223 343 0 0 chr10 69811483 69811556 -75777732 + MER91B DNA MER1_type 1 73 -117 1463 241 50 13 chr10 69812501 69812924 -75776364 - MLT1D LTR MaLR 0 505 5 2357 74 0 3 chr10 69813652 69813950 -75775338 - AluY SINE Alu -9 302 6 672 75 0 0 chr10 69814963 69815057 -75774231 - L1PA13 LINE L1 -87 6076 5983 317 286 23 23 chr10 69816155 69816344 -75772944 + CT-rich Low_complexity Low_complexity 1 189 0 265 252 94 8 chr10 69817271 69817398 -75771890 - Charlie7 DNA MER1_type -58 2554 2417 * 660 231 86 66 chr10 69817391 69817499 -75771789 - Charlie7 DNA MER1_type -1891 721 617 2237 102 0 0 chr10 69817499 69817793 -75771495 + AluSg SINE Alu 1 294 -16 660 231 86 66 chr10 69817793 69817987 -75771301 - Charlie7 DNA MER1_type -1995 617 413 360 283 58 7 chr10 69818116 69818254 -75771034 - Charlie7 DNA MER1_type -2424 188 44 183 157 22 45 chr10 69819965 69820054 -75769234 + CT-rich Low_complexity Low_complexity 1 87 0 190 360 59 37 chr10 69820265 69820401 -75768887 - MIR3 SINE MIR -69 139 1 194 284 122 66 chr10 69820764 69820961 -75768327 - L2 LINE L2 0 3313 3106 535 335 71 30 chr10 69821316 69821582 -75767706 - L3 LINE CR1 -6 1571 1295 1738 131 11 4 chr10 69821609 69821876 -75767412 - AluSx SINE Alu -43 269 1 24 0 0 0 chr10 69822779 69822803 -75766485 + AT_rich Low_complexity Low_complexity 1 24 0 672 243 50 20 chr10 69823266 69823468 -75765820 + MER3 DNA MER1_type 2 209 0 2296 74 0 3 chr10 69823500 69823819 -75765469 + AluSc SINE Alu 2 319 0 829 249 32 45 chr10 69824051 69824272 -75765016 + MER58A DNA MER1_type 2 219 -5 366 236 56 11 chr10 69824290 69824379 -75764909 + MER58B DNA MER1_type 244 336 -5 288 0 0 0 chr10 69826856 69826888 -75762400 + (CA)n Simple_repeat Simple_repeat 2 33 0 2282 82 0 20 chr10 69829337 69829641 -75759647 - AluY SINE Alu -13 298 1 180 319 67 59 chr10 69829849 69829968 -75759320 + MER5A DNA MER1_type 22 141 -48 1570 190 3 23 chr10 69830521 69830826 -75758462 - AluJo SINE Alu -13 299 1 411 21 0 0 chr10 69831267 69831315 -75757973 + (CA)n Simple_repeat Simple_repeat 2 49 0 24 0 0 0 chr10 69831884 69831908 -75757380 + AT_rich Low_complexity Low_complexity 1 24 0 207 69 0 0 chr10 69832067 69832096 -75757192 + (GA)n Simple_repeat Simple_repeat 2 30 0 209 318 30 0 chr10 69832372 69832438 -75756850 + MIR3 SINE MIR 110 177 -31 2491 63 0 0 chr10 69832754 69833057 -75756231 - AluY SINE Alu -8 303 1 182 259 217 30 chr10 69833316 69833482 -75755806 + L3 LINE CR1 636 832 -745 303 238 16 0 chr10 69833870 69833933 -75755355 + tRNA-Ile-ATT tRNA tRNA 11 74 -3 211 205 0 0 chr10 69834599 69834638 -75754650 + (CA)n Simple_repeat Simple_repeat 2 40 0 267 339 28 9 chr10 69835800 69835909 -75753379 + MIR SINE MIR 48 158 -104 299 281 129 76 chr10 69836674 69836816 -75752472 + HAL1 LINE L1 769 902 -1605 4951 36 7 3 chr10 69836816 69837424 -75751864 + L1PA4 LINE L1 5544 6153 -2 299 281 129 76 chr10 69837424 69837807 -75751481 + HAL1 LINE L1 902 1322 -1185 824 317 101 31 chr10 69837807 69838477 -75750811 + L2 LINE L2 2594 3313 0 4911 142 22 24 chr10 69838681 69840386 -75748902 + L1PA16 LINE L1 4428 6157 -9 307 263 94 71 chr10 69840650 69840874 -75748414 + HAL1 LINE L1 2269 2497 -10 220 273 0 0 chr10 69841251 69841306 -75747982 - L2 LINE L2 0 3272 3218 343 228 50 8 chr10 69841497 69841629 -75747659 - MIR SINE MIR -60 202 65 2399 67 3 16 chr10 69841789 69842103 -75747185 - AluY SINE Alu 0 311 2 251 300 0 0 chr10 69842168 69842228 -75747060 + (TATG)n Simple_repeat Simple_repeat 3 62 0 586 255 113 24 chr10 69842572 69842784 -75746504 + MIR SINE MIR 32 262 0 232 27 54 0 chr10 69842851 69842888 -75746400 + (TTATA)n Simple_repeat Simple_repeat 5 43 0 23 97 0 0 chr10 69843546 69843618 -75745670 + AT_rich Low_complexity Low_complexity 1 72 0 211 271 118 24 chr10 69844382 69844467 -75744821 + L2 LINE L2 3208 3300 -13 2018 143 0 6 chr10 69845030 69845345 -75743943 - AluSq SINE Alu 0 313 1 2560 58 0 0 chr10 69845532 69845841 -75743447 - AluY SINE Alu -2 309 1 255 252 111 37 chr10 69846567 69846702 -75742586 - MER21B LTR ERV1 -373 490 346 6836 175 8 7 chr10 69847409 69849558 -75739730 + L1PA13 LINE L1 3985 6160 -3 2705 201 55 42 chr10 69849561 69850228 -75739060 + L1MC4a LINE L1 7133 7808 0 188 351 141 39 chr10 69850337 69850804 -75738484 + L2 LINE L2 2461 2975 -339 193 258 203 31 chr10 69850939 69851067 -75738221 + L2 LINE L2 3151 3300 -13 2269 119 0 0 chr10 69851287 69851599 -75737689 + AluSx SINE Alu 1 312 0 183 205 0 0 chr10 69851804 69851843 -75737445 + A-rich Low_complexity Low_complexity 1 39 0 429 36 0 0 chr10 69852626 69852681 -75736607 + (TG)n Simple_repeat Simple_repeat 2 56 0 1849 136 18 0 chr10 69852681 69852960 -75736328 - AluSx SINE Alu -28 284 1 406 296 127 21 chr10 69853465 69853654 -75735634 - MIR SINE MIR 0 262 54 2804 163 23 13 chr10 69854628 69855101 -75734187 + L1PA14 LINE L1 1 478 -7103 11952 181 7 6 chr10 69855101 69857154 -75732134 + L1PA14 LINE L1 4389 6424 -1175 2352 74 0 3 chr10 69857154 69857451 -75731837 + AluY SINE Alu 7 302 -9 11952 181 7 6 chr10 69857451 69858618 -75730670 + L1PA14 LINE L1 6424 7588 -11 234 368 53 44 chr10 69858750 69859071 -75730217 + L2 LINE L2 2141 2464 -850 828 163 6 52 chr10 69859094 69859266 -75730022 - FRAM SINE Alu -13 163 1 264 339 85 52 chr10 69859314 69859528 -75729760 + L2 LINE L2 2895 3127 -145 1429 165 6 79 chr10 69859528 69859844 -75729444 - AluJo SINE Alu -19 293 1 264 339 85 52 chr10 69859844 69859995 -75729293 + L2 LINE L2 3127 3272 0 180 200 0 0 chr10 69859995 69860035 -75729253 + (TGAA)n Simple_repeat Simple_repeat 2 41 0 22 56 0 0 chr10 69861902 69861938 -75727350 + AT_rich Low_complexity Low_complexity 1 36 0 23 33 0 0 chr10 69862035 69862065 -75727223 + AT_rich Low_complexity Low_complexity 1 30 0 1734 73 97 0 chr10 69862080 69862339 -75726949 - L1MA1 LINE L1 0 6302 6019 10176 178 30 13 chr10 69862342 69864353 -75724935 - L1MA5 LINE L1 -4 6296 4214 2337 106 0 0 chr10 69864353 69864655 -75724633 + AluSg SINE Alu 1 302 -8 10176 178 30 13 chr10 69864655 69865519 -75723769 - L1MA5 LINE L1 -2086 4214 3367 1323 248 48 19 chr10 69865520 69865965 -75723323 + MER89 LTR ERV1 2 559 0 657 263 30 48 chr10 69869066 69869336 -75719952 + HAL1 LINE L1 1 265 -2242 601 283 101 47 chr10 69869379 69869697 -75719591 + HAL1 LINE L1 362 696 -1811 371 341 175 5 chr10 69870702 69870919 -75718369 + MIR SINE MIR 9 262 0 24 32 0 0 chr10 69870924 69870955 -75718333 + AT_rich Low_complexity Low_complexity 1 31 0 431 191 7 0 chr10 69871899 69872046 -75717242 + (TA)n Simple_repeat Simple_repeat 2 149 0 28 0 0 0 chr10 69872297 69872325 -75716963 + AT_rich Low_complexity Low_complexity 1 28 0 2114 146 16 24 chr10 69872694 69873072 -75716216 - THE1C LTR MaLR 0 375 1 357 317 72 75 chr10 69873603 69873909 -75715379 - L2 LINE L2 -4 3309 3005 237 33 0 0 chr10 69873940 69873970 -75715318 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 2229 115 3 0 chr10 69874569 69874873 -75714415 - AluSp SINE Alu -8 305 1 216 167 0 0 chr10 69875129 69875177 -75714111 + (CAGAGA)n Simple_repeat Simple_repeat 3 50 0 3946 144 19 11 chr10 69875694 69876332 -75712956 + MER39B LTR ERV1 1 643 -10 2308 95 0 0 chr10 69876346 69876641 -75712647 + AluSg SINE Alu 1 295 -15 22 56 0 0 chr10 69878446 69878482 -75710806 + AT_rich Low_complexity Low_complexity 1 36 0 229 305 0 0 chr10 69878801 69878860 -75710428 + MIR SINE MIR 201 259 -3 270 309 25 0 chr10 69879474 69879555 -75709733 + MIR SINE MIR 68 150 -112 594 298 45 11 chr10 69880194 69880372 -75708916 - MIR SINE MIR -72 190 7 1251 174 51 96 chr10 69880771 69881127 -75708161 - MER58B DNA MER1_type -1 340 1 1686 149 0 0 chr10 69881241 69881496 -75707792 - AluSg SINE Alu -2 308 54 307 244 12 0 chr10 69881649 69881731 -75707557 - L1MA8 LINE L1 0 6291 6209 * 2283 145 39 14 chr10 69881729 69882164 -75707124 + L1MA8 LINE L1 5787 6232 -59 1339 270 49 49 chr10 69882660 69883208 -75706080 - L1ME3A LINE L1 -9 6161 5614 289 257 257 6 chr10 69884127 69884298 -75704990 + MIR SINE MIR 40 253 -9 313 353 26 0 chr10 69884508 69884624 -75704664 - MIR3 SINE MIR -52 156 38 25 83 0 0 chr10 69884755 69884815 -75704473 + AT_rich Low_complexity Low_complexity 1 60 0 253 321 82 15 chr10 69885540 69885674 -75703614 - MIR SINE MIR -1 261 119 311 271 9 26 chr10 69885864 69886023 -75703265 + L1MC4 LINE L1 7642 7906 -136 23 33 0 0 chr10 69886665 69886695 -75702593 + AT_rich Low_complexity Low_complexity 1 30 0 791 335 80 60 chr10 69886883 69887585 -75701703 - L3 LINE CR1 -125 1452 737 314 296 44 39 chr10 69889313 69889426 -75699862 + L1MCc LINE L1 23 139 -6284 1888 186 96 45 chr10 69889426 69889915 -75699373 - MER67D LTR ERV1 0 514 1 314 296 44 39 chr10 69889915 69890007 -75699281 + L1MCc LINE L1 139 229 -6194 284 241 38 0 chr10 69890056 69890135 -75699153 + L1MC4a LINE L1 6782 6863 -945 628 214 0 0 chr10 69890138 69890255 -75699033 + FLAM_C SINE Alu 3 119 -24 2926 229 70 30 chr10 69890309 69890641 -75698647 + L1MC4a LINE L1 6890 7207 -601 2092 107 16 3 chr10 69890641 69890950 -75698338 + AluSq SINE Alu 1 313 0 2926 229 70 30 chr10 69890950 69891536 -75697752 + L1MC4a LINE L1 7207 7808 0 2340 107 3 0 chr10 69892658 69892968 -75696320 + AluSp SINE Alu 1 311 -2 446 157 22 0 chr10 69893106 69893195 -75696093 + L1MA3 LINE L1 6215 6305 0 212 172 17 0 chr10 69893615 69893673 -75695615 + (TTTA)n Simple_repeat Simple_repeat 1 59 0 821 187 11 44 chr10 69895578 69895641 -75693647 + MER20 DNA MER1_type 42 106 -113 1487 257 91 41 chr10 69895641 69896224 -75693064 + LTR9 LTR ERV1 1 612 0 821 187 11 44 chr10 69896224 69896342 -75692946 + MER20 DNA MER1_type 106 217 -2 423 0 0 0 chr10 69897290 69897337 -75691951 + (TG)n Simple_repeat Simple_repeat 2 48 0 349 323 44 31 chr10 69897400 69897629 -75691659 - L1ME LINE L1 -501 5620 5389 581 126 0 10 chr10 69898135 69898238 -75691050 + (TTCC)n Simple_repeat Simple_repeat 2 103 0 236 389 77 32 chr10 69898437 69898658 -75690630 - MIR SINE MIR -12 250 20 234 269 0 0 chr10 69899174 69899226 -75690062 + (ATG)n Simple_repeat Simple_repeat 3 54 0 691 224 100 0 chr10 69899259 69899429 -75689859 - MIR SINE MIR -55 207 21 656 294 48 41 chr10 69900259 69900551 -75688737 - L2 LINE L2 0 3313 3020 1291 306 110 19 chr10 69900736 69901356 -75687932 + L2 LINE L2 2293 2968 -346 29 70 0 0 chr10 69901701 69901758 -75687530 + AT_rich Low_complexity Low_complexity 1 57 0 274 361 67 67 chr10 69902707 69902976 -75686312 - L2 LINE L2 -32 3240 2972 206 307 74 74 chr10 69903102 69903346 -75685942 - L2 LINE L2 -493 2821 2578 399 128 0 93 chr10 69903390 69903476 -75685812 + MER67C LTR ERV1 312 389 -321 417 226 196 0 chr10 69903499 69903632 -75685656 + MER67D LTR ERV1 356 514 0 458 309 134 55 chr10 69903632 69904124 -75685164 - L2 LINE L2 -736 2578 2048 2008 148 0 3 chr10 69905317 69905627 -75683661 - AluSx SINE Alu -2 310 2 706 278 50 33 chr10 69906174 69906415 -75682873 - MIR SINE MIR -1 261 17 200 325 162 17 chr10 69907097 69907214 -75682074 + MIR3 SINE MIR 8 141 -67 186 314 98 0 chr10 69908734 69908836 -75680452 + MIR SINE MIR 96 207 -55 208 147 0 0 chr10 69911020 69911054 -75678234 + (TAA)n Simple_repeat Simple_repeat 1 34 0 738 215 41 36 chr10 69911091 69911286 -75678002 - MIR SINE MIR -1 261 66 264 59 0 0 chr10 69911489 69911523 -75677765 + (TGG)n Simple_repeat Simple_repeat 3 36 0 3304 189 13 3 chr10 69912071 69912702 -75676586 + L1MB7 LINE L1 5532 6168 -16 192 351 50 100 chr10 69912942 69913201 -75676087 + L2 LINE L2 2987 3232 -40 1238 153 0 14 chr10 69913251 69913460 -75675828 - L1PB3 LINE L1 0 6154 5949 2180 72 7 0 chr10 69914757 69915034 -75674254 + AluSp SINE Alu 28 306 -7 480 18 0 0 chr10 69915125 69915182 -75674106 + (TG)n Simple_repeat Simple_repeat 2 58 0 240 287 131 16 chr10 69915270 69915392 -75673896 + MIR SINE MIR 47 182 -80 296 239 42 0 chr10 69916124 69916195 -75673093 + MIR SINE MIR 119 192 -70 25 0 0 0 chr10 69916550 69916575 -75672713 + AT_rich Low_complexity Low_complexity 1 25 0 221 245 0 0 chr10 69916605 69916654 -75672634 + A-rich Low_complexity Low_complexity 3 51 0 25 31 0 0 chr10 69916955 69916987 -75672301 + AT_rich Low_complexity Low_complexity 1 32 0 335 278 101 114 chr10 69917129 69917507 -75671781 + L2 LINE L2 2870 3242 -71 666 250 36 62 chr10 69918120 69918344 -75670944 - MER20 DNA MER1_type -1 218 1 777 48 38 0 chr10 69918577 69918682 -75670606 + L1PA4 LINE L1 6047 6155 0 477 171 34 41 chr10 69918724 69918870 -75670418 - L1MA7 LINE L1 -4 6287 6143 754 117 75 160 chr10 69918870 69918884 -75670404 + L1MA7 LINE L1 5646 5660 -631 2246 106 0 3 chr10 69918884 69919186 -75670102 + AluSx SINE Alu 3 303 -9 754 117 75 160 chr10 69919186 69919384 -75669904 + L1MA7 LINE L1 5660 5840 -451 1773 133 8 0 chr10 69919554 69919810 -75669478 - Tigger3(Golem) DNA MER2_type 0 3029 2772 679 212 0 60 chr10 69919807 69919847 -75669441 - Tigger3(Golem) DNA MER2_type -1089 142 101 * 1902 156 138 5 chr10 69919847 69920225 -75669063 + MSTA LTR MaLR 1 428 0 679 212 0 60 chr10 69920225 69920335 -75668953 - Tigger3(Golem) DNA MER2_type -1130 101 1 211 229 57 57 chr10 69920335 69920405 -75668883 - L2 LINE L2 -36 3277 3208 215 337 86 69 chr10 69920622 69920797 -75668491 + MIR3 SINE MIR 30 207 -1 289 231 56 74 chr10 69920994 69921102 -75668186 + L2 LINE L2 3205 3310 -3 3881 181 21 8 chr10 69921273 69922028 -75667260 - L1MB1 LINE L1 -4 6164 5400 297 370 45 3 chr10 69922288 69922472 -75666816 + MIR3 SINE MIR 15 206 -2 223 355 0 0 chr10 69922754 69922830 -75666458 + (TAG)n Simple_repeat Simple_repeat 3 78 0 301 198 112 40 chr10 69923073 69923228 -75666060 + L1MCa LINE L1 1996 6243 -158 450 196 0 0 chr10 69923232 69923324 -75665964 + (TA)n Simple_repeat Simple_repeat 1 92 0 2229 113 0 3 chr10 69923402 69923711 -75665577 + AluSc SINE Alu 1 308 -1 709 81 16 0 chr10 69924310 69924433 -75664855 + (TAGA)n Simple_repeat Simple_repeat 4 128 0 1729 260 38 27 chr10 69925139 69925441 -75663847 + L1ME1 LINE L1 5596 5908 -258 2054 131 131 13 chr10 69925441 69925824 -75663464 - MSTA LTR MaLR 0 428 1 1729 260 38 27 chr10 69925824 69926078 -75663210 + L1ME1 LINE L1 5908 6158 -8 24 0 0 0 chr10 69927695 69927719 -75661569 + AT_rich Low_complexity Low_complexity 1 24 0 777 128 24 8 chr10 69927720 69927845 -75661443 - FLAM_C SINE Alu -16 127 1 27 62 0 0 chr10 69927854 69927902 -75661386 + AT_rich Low_complexity Low_complexity 1 48 0 232 369 48 19 chr10 69927930 69928033 -75661255 - L2 LINE L2 -7 3306 3201 202 287 0 92 chr10 69928533 69928620 -75660668 - L2 LINE L2 -1 3312 3234 21 0 0 0 chr10 69928975 69928996 -75660292 + AT_rich Low_complexity Low_complexity 1 21 0 477 231 29 0 chr10 69929056 69929160 -75660128 + MIR SINE MIR 155 261 -1 1519 168 49 28 chr10 69930370 69930655 -75658633 + AluJb SINE Alu 1 291 -21 369 234 138 14 chr10 69930662 69930807 -75658481 - Charlie7 DNA MER1_type -1012 1600 1438 1749 247 81 3 chr10 69930815 69931394 -75657894 + L1MC4 LINE L1 874 1497 -4929 2219 138 8 22 chr10 69931441 69931796 -75657492 - THE1B LTR MaLR -12 352 3 11684 87 6 1 chr10 69931798 69933371 -75655917 - THE1B-int LTR MaLR 0 1580 1 2297 132 5 24 chr10 69933371 69933742 -75655546 - THE1B LTR MaLR 0 364 1 1817 201 198 15 chr10 69933749 69934438 -75654850 + L1M1 LINE L1 2820 3607 -3958 7355 212 74 17 chr10 69934438 69935789 -75653499 + L1MC3 LINE L1 5781 7270 -515 2465 52 0 13 chr10 69935789 69936096 -75653192 + AluY SINE Alu 1 303 -8 7355 212 74 17 chr10 69936096 69936617 -75652671 + L1MC3 LINE L1 7270 7760 -25 2085 98 11 0 chr10 69936617 69936892 -75652396 + AluSg SINE Alu 21 298 -12 376 304 42 37 chr10 69936928 69937119 -75652169 + L1MC4 LINE L1 4560 4751 -1675 3066 154 69 25 chr10 69937124 69937759 -75651529 + L1MC1 LINE L1 5671 6333 0 2307 102 3 0 chr10 69937785 69938090 -75651198 + AluSp SINE Alu 1 306 -7 4300 208 13 9 chr10 69938103 69938969 -75650319 + L1PA13 LINE L1 233 1101 -5686 4040 185 15 45 chr10 69938968 69939360 -75649928 + L1M1 LINE L1 4364 4766 -2799 * 2112 99 0 43 chr10 69939360 69939683 -75649605 + AluSc SINE Alu 1 309 0 4040 185 15 45 chr10 69939683 69940230 -75649058 + L1M1 LINE L1 4766 5275 -2290 5910 103 16 3 chr10 69940256 69941851 -75647437 + L1PA13 LINE L1 4551 6147 -16 559 314 90 53 chr10 69941890 69942031 -75647257 + L1MC4 LINE L1 4777 4911 -1515 2044 139 7 0 chr10 69942031 69942341 -75646947 + AluSx SINE Alu 1 312 0 559 314 90 53 chr10 69942341 69942978 -75646310 + L1MC4 LINE L1 4911 5584 -842 534 262 13 27 chr10 69943008 69943190 -75646098 + L1MC4 LINE L1 5702 5879 -522 1299 287 140 20 chr10 69943244 69944552 -75644736 + L1MC4 LINE L1 6072 7649 -673 2277 201 135 58 chr10 69944590 69944702 -75644586 + MER63C DNA MER1_type 1 103 -957 2359 74 0 3 chr10 69944702 69945000 -75644288 - AluY SINE Alu -14 297 1 2277 201 135 58 chr10 69945000 69945628 -75643660 + MER63C DNA MER1_type 103 815 -245 1821 114 57 7 chr10 69945628 69945908 -75643380 - AluSx SINE Alu -18 294 1 2277 201 135 58 chr10 69945908 69946004 -75643284 + MER63C DNA MER1_type 815 902 -28 595 287 58 63 chr10 69946013 69946441 -75642847 + L1MC4 LINE L1 7689 8114 -208 1429 208 3 10 chr10 69946466 69946764 -75642524 + AluJb SINE Alu 3 298 -14 1692 123 10 97 chr10 69947345 69947655 -75641633 + AluSx SINE Alu 1 283 -29 186 43 0 0 chr10 69947655 69947678 -75641610 + (AAATG)n Simple_repeat Simple_repeat 3 25 0 1897 146 3 22 chr10 69949777 69950093 -75639195 + AluSx SINE Alu 3 312 0 2279 239 30 15 chr10 69950717 69951385 -75637903 - L1M4 LINE L1 -904 5176 4499 387 237 126 64 chr10 69953265 69953279 -75636009 - L1MC4a LINE L1 -1626 6182 6170 2129 121 3 3 chr10 69953279 69953585 -75635703 - AluSp SINE Alu -7 306 1 387 237 126 64 chr10 69953585 69953912 -75635376 - L1MC4a LINE L1 -1638 6170 5820 2215 108 0 0 chr10 69954652 69954949 -75634339 - AluSc SINE Alu -12 297 1 1613 199 0 3 chr10 69955365 69955652 -75633636 - AluJb SINE Alu -24 288 3 24 0 0 0 chr10 69955870 69955894 -75633394 + AT_rich Low_complexity Low_complexity 1 24 0 397 219 38 9 chr10 69956307 69956412 -75632876 - L1MC4a LINE L1 -1979 5829 5722 250 45 0 91 chr10 69956572 69956638 -75632650 + (TATG)n Simple_repeat Simple_repeat 2 61 0 21 0 0 0 chr10 69957147 69957168 -75632120 + AT_rich Low_complexity Low_complexity 1 21 0 1100 190 39 143 chr10 69957168 69957574 -75631714 + MLT1A1 LTR MaLR 1 364 -1 392 252 20 0 chr10 69957897 69958044 -75631244 + (TA)n Simple_repeat Simple_repeat 1 150 0 21 36 0 0 chr10 69958155 69958183 -75631105 + AT_rich Low_complexity Low_complexity 1 28 0 271 343 41 4 chr10 69958271 69958516 -75630772 - L1M4 LINE L1 -2200 3880 3627 2292 121 11 14 chr10 69958861 69959226 -75630062 + THE1B LTR MaLR 1 364 0 1311 123 43 8 chr10 69959295 69959530 -75629758 - L1MA4 LINE L1 -1 6299 6057 1766 260 129 49 chr10 69961631 69962646 -75626642 - L1ME LINE L1 -4893 1139 105 285 29 0 0 chr10 69962646 69962680 -75626608 + (CA)n Simple_repeat Simple_repeat 2 35 0 1766 260 129 49 chr10 69962680 69962789 -75626499 - L1ME LINE L1 -5927 105 6 198 0 0 0 chr10 69963517 69963539 -75625749 + (TA)n Simple_repeat Simple_repeat 2 23 0 602 219 11 2 chr10 69963711 69963894 -75625394 - MER58B DNA MER1_type -1 340 1 459 296 58 40 chr10 69964311 69964585 -75624703 + L1MD1 LINE L1 4798 5076 -1070 347 230 130 23 chr10 69964587 69964884 -75624404 + L1MD1 LINE L1 5122 5467 -695 739 199 23 0 chr10 69964897 69965028 -75624260 + L1MDa LINE L1 119 252 -6288 730 236 51 32 chr10 69965050 69965266 -75624022 + L1MD1 LINE L1 6022 6241 -1 469 277 127 9 chr10 69965266 69965479 -75623809 - L2 LINE L2 -18 3295 3058 542 277 47 75 chr10 69965484 69965762 -75623526 - L2 LINE L2 -390 2924 2655 14887 202 55 11 chr10 69965840 69966202 -75623086 - L1PB1 LINE L1 -1 6866 6521 973 58 15 0 chr10 69966202 69966339 -75622949 + (TAGA)n Simple_repeat Simple_repeat 4 142 0 14887 202 55 11 chr10 69966339 69972440 -75616848 - L1PB1 LINE L1 -346 6521 101 567 324 24 0 chr10 69972534 69972741 -75616547 + MIR SINE MIR 47 258 -4 27 0 0 0 chr10 69973004 69973031 -75616257 + AT_rich Low_complexity Low_complexity 1 27 0 258 276 17 0 chr10 69973213 69973271 -75616017 + MLT1K LTR MaLR 174 232 -356 1455 175 7 131 chr10 69973840 69974292 -75614996 + L1PA15 LINE L1 5769 6164 -1 35 0 0 22 chr10 69974548 69974579 -75614709 + AT_rich Low_complexity Low_complexity 1 32 -13 2110 113 0 0 chr10 69974579 69974862 -75614426 - AluSg1 SINE Alu -26 283 1 35 0 0 22 chr10 69974862 69974876 -75614412 + AT_rich Low_complexity Low_complexity 32 45 0 219 249 67 129 chr10 69974879 69974970 -75614318 - MIR SINE MIR -50 212 138 1668 128 0 123 chr10 69974970 69975321 -75613967 + AluSx SINE Alu 1 308 -4 219 249 67 129 chr10 69975321 69975422 -75613866 - MIR SINE MIR -124 138 32 21 36 0 0 chr10 69976358 69976386 -75612902 + AT_rich Low_complexity Low_complexity 1 28 0 784 348 25 19 chr10 69976494 69976862 -75612426 - LTR16B LTR ERVL -92 372 3 26 0 0 0 chr10 69977146 69977172 -75612116 + AT_rich Low_complexity Low_complexity 1 26 0 688 339 102 32 chr10 69977173 69977642 -75611646 + L2 LINE L2 2806 3307 -6 5858 123 14 3 chr10 69977861 69979027 -75610261 - L1PB1 LINE L1 -33 6118 4942 225 0 0 0 chr10 69979037 69979062 -75610226 + (T)n Simple_repeat Simple_repeat 1 25 0 355 355 61 48 chr10 69979251 69979629 -75609659 - L2 LINE L2 -3 3310 2928 2001 136 3 0 chr10 69979647 69979941 -75609347 + AluSx SINE Alu 1 295 -17 1767 105 112 4 chr10 69980088 69980355 -75608933 + AluSx SINE Alu 1 296 -16 204 272 0 11 chr10 69981242 69981334 -75607954 + T-rich Low_complexity Low_complexity 4 94 0 1429 195 15 8 chr10 69982232 69982494 -75606794 + AluJb SINE Alu 35 298 -14 27 0 0 0 chr10 69982564 69982591 -75606697 + AT_rich Low_complexity Low_complexity 1 27 0 446 246 97 15 chr10 69982658 69982792 -75606496 - MIR SINE MIR -102 160 16 720 291 48 4 chr10 69982807 69983034 -75606254 - MIR SINE MIR -25 237 1 187 264 139 42 chr10 69983201 69983273 -75606015 + MIR SINE MIR 166 244 -18 1428 162 4 36 chr10 69983327 69983574 -75605714 - MER8 DNA MER2_type 0 239 1 294 268 41 21 chr10 69983674 69983771 -75605517 - MIR SINE MIR -64 144 46 204 97 0 0 chr10 69983963 69983994 -75605294 + (CA)n Simple_repeat Simple_repeat 2 32 0 207 149 15 60 chr10 69984096 69984163 -75605125 + (AATAG)n Simple_repeat Simple_repeat 3 66 0 1876 144 109 3 chr10 69985344 69985664 -75603624 + MLT1A1 LTR MaLR 12 365 0 270 227 52 103 chr10 69986988 69987085 -75602203 + L1MDa LINE L1 2 93 -6447 194 208 19 0 chr10 69987094 69987147 -75602141 + (TA)n Simple_repeat Simple_repeat 1 54 0 405 86 0 0 chr10 69987195 69987253 -75602035 + (TA)n Simple_repeat Simple_repeat 1 58 0 213 94 0 0 chr10 69987266 69987298 -75601990 + (CA)n Simple_repeat Simple_repeat 2 33 0 4064 212 78 6 chr10 69987303 69988391 -75600897 + L1MD1 LINE L1 5084 6242 0 26 0 0 0 chr10 69990637 69990663 -75598625 + AT_rich Low_complexity Low_complexity 1 26 0 2586 40 0 0 chr10 69991048 69991350 -75597938 - AluY SINE Alu -9 302 1 25 0 0 0 chr10 69991623 69991648 -75597640 + AT_rich Low_complexity Low_complexity 1 25 0 331 205 25 131 chr10 69991968 69992090 -75597198 + MER58A DNA MER1_type 1 109 0 388 315 45 38 chr10 69992190 69992482 -75596806 - L1ME3A LINE L1 -238 5932 5639 399 235 91 62 chr10 69992512 69992832 -75596456 - L1ME3A LINE L1 -662 5500 5160 1939 121 28 3 chr10 69992832 69993114 -75596174 + AluSx SINE Alu 14 302 -10 399 235 91 62 chr10 69993114 69993158 -75596130 - L1ME3A LINE L1 -1002 5160 5119 277 211 64 73 chr10 69993483 69993592 -75595696 - L1MDa LINE L1 -3652 2730 2623 237 243 0 0 chr10 69994733 69994803 -75594485 + (TA)n Simple_repeat Simple_repeat 1 70 0 1616 98 61 8 chr10 69994803 69995067 -75594221 + L1MA6 LINE L1 6023 6300 0 219 36 0 0 chr10 69995072 69995100 -75594188 + (TG)n Simple_repeat Simple_repeat 1 28 0 4782 239 53 45 chr10 69995583 69997063 -75592225 + L1M4 LINE L1 31 1521 -5021 3381 177 82 38 chr10 69997071 69997391 -75591897 - L1MA9 LINE L1 -215 6097 5792 324 0 0 0 chr10 69997391 69997427 -75591861 + (TG)n Simple_repeat Simple_repeat 1 36 0 3381 177 82 38 chr10 69997427 69998405 -75590883 - L1MA9 LINE L1 -520 5792 4738 329 282 52 26 chr10 69998393 69998737 -75590551 - L1MDa LINE L1 -4359 2023 1643 * 1358 251 12 27 chr10 69998735 69999137 -75590151 + L1M4 LINE L1 1504 1899 -4747 268 297 28 66 chr10 70000005 70000187 -75589101 + LTR68 LTR ERV1 283 457 -283 2047 151 67 3 chr10 70000575 70000947 -75588341 + MSTD LTR MaLR 1 396 0 21 0 0 0 chr10 70001329 70001350 -75587938 + AT_rich Low_complexity Low_complexity 1 21 0 332 273 53 38 chr10 70001661 70001793 -75587495 + L2 LINE L2 3159 3292 -21 376 298 131 0 chr10 70002089 70002257 -75587031 - L2 LINE L2 -1228 2086 1897 1812 115 3 21 chr10 70003102 70003388 -75585900 + AluSx SINE Alu 8 288 -24 302 304 104 9 chr10 70005803 70005918 -75583370 - Charlie8 DNA MER1_type -2154 263 138 473 0 18 0 chr10 70006138 70006195 -75583093 + (TCTA)n Simple_repeat Simple_repeat 3 60 0 266 318 34 40 chr10 70007162 70007338 -75581950 + L1 LINE L1 3588 3762 -2384 1543 138 7 54 chr10 70008387 70008566 -75580722 - AluSg SINE Alu 0 314 154 309 26 0 0 chr10 70008566 70008604 -75580684 + (TA)n Simple_repeat Simple_repeat 1 38 0 1543 138 7 54 chr10 70008604 70008752 -75580536 - AluSg SINE Alu -160 154 1 282 160 0 0 chr10 70008884 70008934 -75580354 - MER4-int LTR ERV1 -5437 1161 1112 17538 61 2 3 chr10 70009588 70012661 -75576627 - L1PA6 LINE L1 -2 6152 3082 263 313 142 39 chr10 70012861 70013094 -75576194 - L2 LINE L2 -1195 2119 1863 515 320 86 23 chr10 70014597 70014772 -75574516 - MIR3 SINE MIR -2 206 21 3117 133 22 32 chr10 70014790 70015325 -75573963 - LTR26B LTR ERV1 -1 530 1 314 278 108 38 chr10 70015746 70015958 -75573330 - MIR SINE MIR -14 248 22 3147 176 21 27 chr10 70016274 70016900 -75572388 - LTR29 LTR ERV1 0 622 1 977 216 16 5 chr10 70017124 70017314 -75571974 - LTR26E LTR ERV1 -36 586 395 776 94 0 0 chr10 70017314 70017420 -75571868 - MER84 LTR ERVI -401 106 1 4031 98 22 30 chr10 70017420 70018052 -75571236 - MER84-int LTR ERV1 0 4954 4328 * 20076 128 10 16 chr10 70018050 70020139 -75569149 - MER84-int LTR ERV1 -982 3972 1908 2246 93 0 3 chr10 70020139 70020430 -75568858 - AluSp SINE Alu -19 294 5 20076 128 10 16 chr10 70020430 70021439 -75567849 - MER84-int LTR ERV1 -3046 1908 894 4866 147 7 7 chr10 70021446 70022201 -75567087 - MER84-int LTR ERV1 -4199 755 1 3553 103 6 0 chr10 70022201 70022694 -75566594 - MER84 LTR ERVI 0 507 12 250 197 33 0 chr10 70023134 70023195 -75566093 + (CA)n Simple_repeat Simple_repeat 2 64 0 182 274 129 40 chr10 70023894 70024018 -75565270 + MIR SINE MIR 84 218 -44 230 307 102 73 chr10 70024319 70024456 -75564832 + L2 LINE L2 3173 3313 0 942 221 100 9 chr10 70024872 70025103 -75564185 + MIR SINE MIR 11 262 0 3900 142 12 35 chr10 70026296 70027020 -75562268 - L1MA2 LINE L1 0 7723 7016 210 37 0 0 chr10 70027020 70027047 -75562241 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 547 68 0 0 chr10 70027047 70027120 -75562168 - AluY SINE Alu -29 282 210 3204 132 26 26 chr10 70027120 70028016 -75561272 - L1MA2 LINE L1 -698 7026 6121 * 6014 156 28 13 chr10 70028004 70029459 -75559829 - L1MA2 LINE L1 -3537 4028 2550 1111 239 0 5 chr10 70029459 70029664 -75559624 - L1MA2 LINE L1 -5987 1578 1375 * 1844 140 24 40 chr10 70029648 70029801 -75559487 - L1M1 LINE L1 -5021 2544 2390 2115 105 10 7 chr10 70029801 70030097 -75559191 - AluSc SINE Alu -8 301 5 1844 140 24 40 chr10 70030097 70030314 -75558974 - L1M1 LINE L1 -5175 2390 2180 5027 226 118 33 chr10 70030318 70031935 -75557353 + MER52A LTR ERV1 1 1755 0 6235 172 134 3 chr10 70031935 70033099 -75556189 - L1M1 LINE L1 -5390 2175 859 366 44 0 0 chr10 70033100 70033145 -75556143 - MER4C LTR ERV1 -26 439 395 * 4533 157 68 11 chr10 70033116 70033933 -75555355 - MER4D LTR ERV1 -39 864 1 1284 246 45 47 chr10 70033934 70034548 -75554740 - L1ME LINE L1 -363 5801 5136 1310 145 14 14 chr10 70034587 70034794 -75554494 - MSTC LTR MaLR 0 428 222 622 135 81 0 chr10 70034775 70034886 -75554402 - MSTC LTR MaLR -308 120 1 * 26 0 0 0 chr10 70034895 70034921 -75554367 + AT_rich Low_complexity Low_complexity 1 26 0 820 217 72 10 chr10 70035503 70035710 -75553578 - L1MD2 LINE L1 -13 6346 6127 329 179 82 22 chr10 70037592 70037726 -75551562 + (TTAA)n Simple_repeat Simple_repeat 2 143 0 331 335 86 24 chr10 70038045 70038254 -75551034 - L1ME4a LINE L1 -19 6102 5881 899 203 48 78 chr10 70039751 70040046 -75549242 - AluJo SINE Alu -25 287 2 45 102 0 0 chr10 70041387 70041544 -75547744 + AT_rich Low_complexity Low_complexity 1 157 0 1347 307 85 26 chr10 70041636 70042177 -75547111 - MLT1E LTR MaLR -8 585 13 180 184 0 0 chr10 70042458 70042507 -75546781 + (TG)n Simple_repeat Simple_repeat 2 50 0 956 288 128 26 chr10 70042626 70043690 -75545598 - L1ME3A LINE L1 -5 6165 4900 2521 44 0 13 chr10 70043690 70044005 -75545283 - AluY SINE Alu 0 311 1 956 288 128 26 chr10 70044005 70044413 -75544875 - L1ME3A LINE L1 -1270 4900 4535 27 49 0 0 chr10 70044426 70044467 -75544821 + AT_rich Low_complexity Low_complexity 1 41 0 284 279 27 0 chr10 70044469 70044580 -75544708 - L1ME LINE L1 -1495 4651 4538 746 264 0 0 chr10 70044587 70044750 -75544538 - MLT1E1 LTR MaLR 0 654 492 22 56 0 0 chr10 70045174 70045210 -75544078 + AT_rich Low_complexity Low_complexity 1 36 0 1874 283 63 19 chr10 70045600 70046222 -75543066 + L1MA5 LINE L1 159 807 -6402 * 12971 212 37 24 chr10 70046194 70049718 -75539570 + L1MA5 LINE L1 1654 5132 -2230 689 210 0 16 chr10 70049718 70049842 -75539446 + FLAM_A SINE Alu 1 122 -11 12971 212 37 24 chr10 70049842 70051459 -75537829 + L1MA5 LINE L1 5132 6877 -485 288 0 0 0 chr10 70051459 70051491 -75537797 + (TA)n Simple_repeat Simple_repeat 2 33 0 12971 212 37 24 chr10 70051491 70051984 -75537304 + L1MA5 LINE L1 6877 7362 0 1025 201 214 89 chr10 70052580 70052837 -75536451 - MLT2B2 LTR ERVL 0 515 291 863 154 0 0 chr10 70052837 70052967 -75536321 - FLAM_C SINE Alu -3 130 1 1025 201 214 89 chr10 70052967 70053167 -75536121 - MLT2B2 LTR ERVL -224 291 1 269 225 56 11 chr10 70053339 70053428 -75535860 + MER46C DNA MER2_type 80 172 -166 342 230 32 8 chr10 70054075 70054201 -75535087 + CT-rich Low_complexity Low_complexity 4 132 0 779 106 26 13 chr10 70054214 70054365 -75534923 + CT-rich Low_complexity Low_complexity 1 153 0 204 304 0 0 chr10 70054636 70054705 -75534583 + A-rich Low_complexity Low_complexity 3 71 0 21 0 0 0 chr10 70054823 70054844 -75534444 + AT_rich Low_complexity Low_complexity 1 21 0 1835 196 149 67 chr10 70055834 70056491 -75532797 + LTR1B LTR ERV1 1 711 -115 2172 117 3 0 chr10 70056732 70057041 -75532247 - AluSx SINE Alu -2 310 1 1432 227 123 53 chr10 70057067 70057573 -75531715 - MLT1F LTR MaLR -1 541 1 595 240 30 151 chr10 70057596 70057967 -75531321 - MLT1F-int LTR MaLR -24 1347 1022 254 299 26 58 chr10 70058030 70058184 -75531104 - MLT1F-int LTR MaLR -1221 150 2 1217 239 109 72 chr10 70058237 70058667 -75530621 - MLT1F LTR MaLR -92 450 5 1970 198 30 10 chr10 70058678 70059085 -75530203 - MER61B LTR ERV1 -29 781 2 2161 188 32 140 chr10 70059165 70059514 -75529774 + L1MD2 LINE L1 5581 5812 -430 2377 78 0 0 chr10 70059514 70059810 -75529478 - AluSg1 SINE Alu -13 296 1 2161 188 32 140 chr10 70059810 70060188 -75529100 + L1MD2 LINE L1 5812 6229 -13 350 358 28 0 chr10 70060190 70060299 -75528989 + MIR SINE MIR 18 129 -133 1334 145 62 155 chr10 70060365 70060863 -75528425 - LTR47A LTR ERVL 0 452 1 288 268 103 0 chr10 70061471 70061568 -75527720 + MIR SINE MIR 120 226 -36 252 59 0 0 chr10 70061866 70061900 -75527388 + (TCTA)n Simple_repeat Simple_repeat 1 34 0 25 0 0 0 chr10 70062225 70062250 -75527038 + AT_rich Low_complexity Low_complexity 1 25 0 1748 144 10 46 chr10 70063851 70064156 -75525132 - AluSx SINE Alu -12 300 7 2161 124 3 0 chr10 70064594 70064900 -75524388 + AluSq SINE Alu 1 307 -6 219 69 0 0 chr10 70066935 70066964 -75522324 + (TCTCTG)n Simple_repeat Simple_repeat 2 30 0 1048 262 139 34 chr10 70067253 70067692 -75521596 + L2 LINE L2 2829 3313 0 819 196 98 16 chr10 70071490 70071684 -75517604 + MER6B DNA MER2_type 1 210 0 262 308 72 62 chr10 70072010 70072218 -75517070 - L2 LINE L2 -1 3312 3103 267 329 37 0 chr10 70072449 70072531 -75516757 + MIR3 SINE MIR 115 199 -9 240 183 67 0 chr10 70073050 70073110 -75516178 + MER53 DNA DNA 9 72 -117 23 33 0 0 chr10 70073227 70073257 -75516031 + AT_rich Low_complexity Low_complexity 1 30 0 1820 194 14 11 chr10 70074284 70074645 -75514643 - MER57A LTR ERV1 0 403 42 2164 130 10 0 chr10 70074798 70075106 -75514182 + AluSq SINE Alu 1 311 -2 3304 206 37 5 chr10 70076506 70077352 -75511936 + L1P LINE L1 4031 4903 -1243 387 156 31 0 chr10 70078896 70078960 -75510328 + AluJ/FLAM SINE Alu 1 66 -236 33 0 0 0 chr10 70079100 70079133 -75510155 + AT_rich Low_complexity Low_complexity 1 33 0 22 56 0 0 chr10 70079429 70079465 -75509823 + AT_rich Low_complexity Low_complexity 1 36 0 1796 121 0 4 chr10 70080306 70080554 -75508734 - AluSx SINE Alu -60 252 6 1628 173 34 27 chr10 70081548 70081958 -75507330 + Charlie1b DNA MER1_type 110 522 -1 292 362 92 22 chr10 70082047 70082232 -75507056 - MIR SINE MIR -53 209 12 258 32 0 0 chr10 70083684 70083715 -75505573 + (TC)n Simple_repeat Simple_repeat 2 32 0 27 0 0 0 chr10 70084160 70084187 -75505101 + AT_rich Low_complexity Low_complexity 1 27 0 426 171 0 0 chr10 70084316 70084386 -75504902 - MER3 DNA MER1_type -138 71 2 328 110 12 0 chr10 70084997 70085053 -75504235 + Alu SINE Alu 1 44 -256 28 0 0 0 chr10 70085686 70085714 -75503574 + AT_rich Low_complexity Low_complexity 1 28 0 26 30 0 0 chr10 70085816 70085849 -75503439 + AT_rich Low_complexity Low_complexity 1 33 0 21 71 0 0 chr10 70085911 70085953 -75503335 + AT_rich Low_complexity Low_complexity 1 42 0 8806 77 2 1 chr10 70087148 70088356 -75500932 + L1P LINE L1 1 1209 -4937 2513 219 70 68 chr10 70088495 70089550 -75499738 + L1M4 LINE L1 3608 4664 -1482 255 31 0 0 chr10 70089668 70089700 -75499588 + (CA)n Simple_repeat Simple_repeat 2 33 0 6157 47 0 15 chr10 70090086 70090934 -75498354 - L1PA4 LINE L1 0 6155 5321 246 297 9 18 chr10 70090949 70091060 -75498228 + CT-rich Low_complexity Low_complexity 5 114 0 401 234 11 46 chr10 70091078 70091304 -75497984 + CT-rich Low_complexity Low_complexity 1 217 0 189 0 0 0 chr10 70091535 70091556 -75497732 + (TTTTTG)n Simple_repeat Simple_repeat 3 23 0 359 279 82 78 chr10 70094963 70095257 -75494031 + L3b LINE CR1 1174 1468 -115 180 97 0 0 chr10 70096203 70096234 -75493054 + (C)n Simple_repeat Simple_repeat 1 31 0 448 288 68 50 chr10 70097182 70097463 -75491825 + L1MDa LINE L1 34 319 -6221 188 355 13 0 chr10 70098908 70098984 -75490304 + MIR SINE MIR 156 232 -30 263 252 13 13 chr10 70099566 70099717 -75489571 + (TA)n Simple_repeat Simple_repeat 2 152 0 212 169 65 13 chr10 70099749 70099826 -75489462 + (TA)n Simple_repeat Simple_repeat 2 82 0 266 207 16 41 chr10 70099839 70099960 -75489328 + (CATATA)n Simple_repeat Simple_repeat 6 123 0 242 271 43 14 chr10 70100073 70100143 -75489145 + L2 LINE L2 3238 3309 -4 326 288 220 8 chr10 70101399 70101531 -75487757 + L2 LINE L2 3108 3267 -5 345 273 167 13 chr10 70101965 70102115 -75487173 + MIR SINE MIR 78 250 -12 850 232 113 23 chr10 70102235 70102632 -75486656 - L1M4 LINE L1 -845 5301 4869 183 329 71 0 chr10 70103558 70103628 -75485660 - L2 LINE L2 -13 3259 3185 531 246 127 8 chr10 70103816 70103950 -75485338 - MER5A DNA MER1_type 0 189 40 3679 186 28 11 chr10 70104107 70104890 -75484398 - L1P LINE L1 -5342 804 9 252 0 0 0 chr10 70105267 70105295 -75483993 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 260 159 0 48 chr10 70106887 70106950 -75482338 + CT-rich Low_complexity Low_complexity 1 60 0 2260 186 21 97 chr10 70107740 70108484 -75480804 - L1MB7 LINE L1 -46 6138 5451 8195 78 8 1 chr10 70109089 70110287 -75479001 + L1P LINE L1 2018 3223 -2923 11690 40 12 1 chr10 70110387 70111937 -75477351 - L1P LINE L1 -1771 4375 2808 238 222 0 22 chr10 70112115 70112160 -75477128 - MIR SINE MIR -141 67 24 180 125 0 0 chr10 70112609 70112641 -75476647 + (TTA)n Simple_repeat Simple_repeat 1 32 0 306 106 0 0 chr10 70113902 70113949 -75475339 + (ATG)n Simple_repeat Simple_repeat 2 48 0 655 263 54 16 chr10 70113977 70114187 -75475101 + MLT1G1 LTR MaLR 10 206 -389 8182 77 3 4 chr10 70114639 70115814 -75473474 + L1P LINE L1 1217 2389 -3757 890 177 75 175 chr10 70115962 70116193 -75473095 + MLT2B1 LTR ERVL 8 261 -259 2174 116 3 0 chr10 70116193 70116487 -75472801 + AluSq SINE Alu 1 295 -18 890 177 75 175 chr10 70116487 70116825 -75472463 + MLT2B1 LTR ERVL 260 520 0 471 325 85 5 chr10 70117106 70117306 -75471982 + MIR SINE MIR 47 262 0 1171 197 5 0 chr10 70117875 70118068 -75471220 - AluJo SINE Alu -118 194 1 2221 104 3 10 chr10 70118327 70118634 -75470654 - AluSg SINE Alu -5 305 1 491 196 116 14 chr10 70119921 70120059 -75469229 - MIR SINE MIR 0 262 111 1678 178 43 35 chr10 70121570 70121941 -75467347 + MLT1A2 LTR MaLR 1 374 0 520 318 28 19 chr10 70122170 70122381 -75466907 - MIR SINE MIR -2 260 48 185 0 40 0 chr10 70122495 70122520 -75466768 + (TA)n Simple_repeat Simple_repeat 1 26 0 593 202 9 9 chr10 70122595 70122709 -75466579 + FLAM_C SINE Alu 3 116 -17 182 222 127 63 chr10 70123006 70123069 -75466219 - MIR3 SINE MIR -32 176 110 3215 68 0 5 chr10 70123456 70123880 -75465408 + L1PA7 LINE L1 5729 6150 -4 1480 227 160 23 chr10 70123946 70124094 -75465194 + MLT1F LTR MaLR 1 127 -415 225 0 0 0 chr10 70124094 70124119 -75465169 + (TC)n Simple_repeat Simple_repeat 1 25 0 1480 227 160 23 chr10 70124119 70124445 -75464843 + MLT1F LTR MaLR 127 540 -2 334 250 87 67 chr10 70125017 70125225 -75464063 - L1MC4a LINE L1 -1195 6613 6441 718 296 86 19 chr10 70125227 70125599 -75463689 - HAL1 LINE L1 -703 1804 1408 336 286 13 0 chr10 70125641 70125718 -75463570 + MIR SINE MIR 2 79 -183 925 184 0 20 chr10 70125854 70126006 -75463282 - AluJo SINE Alu -30 282 134 334 175 12 0 chr10 70126145 70126225 -75463063 + L1MA4 LINE L1 6219 6299 -1 960 278 29 0 chr10 70126893 70127166 -75462122 + L1ME LINE L1 5493 5773 -397 270 0 0 0 chr10 70127584 70127614 -75461674 + (TAA)n Simple_repeat Simple_repeat 3 32 0 432 0 0 0 chr10 70127614 70127662 -75461626 + (TTA)n Simple_repeat Simple_repeat 2 49 0 434 301 92 27 chr10 70127757 70128019 -75461269 - HAL1 LINE L1 -727 1780 1502 449 90 0 0 chr10 70129249 70129316 -75459972 - L1PA2 LINE L1 0 6155 6089 521 335 42 28 chr10 70129901 70130188 -75459100 + L1MEc LINE L1 176 466 -5930 22 0 0 0 chr10 70130705 70130727 -75458561 + AT_rich Low_complexity Low_complexity 1 22 0 3919 145 72 46 chr10 70130908 70130953 -75458335 + LTR1B LTR ERV1 1 43 -783 1951 124 0 27 chr10 70130953 70131252 -75458036 + AluSx SINE Alu 19 309 -3 3919 145 72 46 chr10 70131252 70131638 -75457650 + LTR1B LTR ERV1 43 417 -409 1745 142 0 15 chr10 70131638 70131930 -75457358 + AluSg SINE Alu 20 307 0 3919 145 72 46 chr10 70131930 70132301 -75456987 + LTR1B LTR ERV1 417 826 0 518 296 37 11 chr10 70132503 70132692 -75456596 + L1MEc LINE L1 226 419 -5977 738 174 0 15 chr10 70132995 70133127 -75456161 - AluJo SINE Alu -172 130 1 324 340 114 26 chr10 70133139 70133410 -75455878 + L3b LINE CR1 1238 1532 -51 706 217 14 29 chr10 70135221 70135428 -75453860 - L1M4 LINE L1 -944 5202 4999 633 218 117 106 chr10 70135520 70135974 -75453314 - LTR37B LTR ERV1 -9 459 1 21 0 0 0 chr10 70136817 70136838 -75452450 + AT_rich Low_complexity Low_complexity 1 21 0 1436 219 11 0 chr10 70137334 70137608 -75451680 + AluJo SINE Alu 1 277 -35 219 36 0 0 chr10 70137609 70137637 -75451651 + (TC)n Simple_repeat Simple_repeat 1 28 0 22 0 0 0 chr10 70137670 70137692 -75451596 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr10 70138674 70138695 -75450593 + AT_rich Low_complexity Low_complexity 1 21 0 1783 177 34 22 chr10 70139076 70139432 -75449856 - MER6 DNA MER2_type -504 361 2 2324 103 0 10 chr10 70140049 70140359 -75448929 + AluSg SINE Alu 1 307 -3 4102 186 61 22 chr10 70140359 70141313 -75447975 + L1MC2 LINE L1 5206 6194 -150 280 376 29 24 chr10 70141579 70141789 -75447499 - MIR SINE MIR -5 257 47 207 100 0 0 chr10 70142451 70142481 -75446807 + (A)n Simple_repeat Simple_repeat 1 30 0 299 232 59 100 chr10 70143857 70144077 -75445211 + L1ME4a LINE L1 5837 6047 -74 251 362 71 24 chr10 70144454 70144581 -75444707 - L2 LINE L2 -4 3268 3136 22 35 0 0 chr10 70144941 70144970 -75444318 + AT_rich Low_complexity Low_complexity 1 29 0 224 200 0 40 chr10 70146926 70146976 -75442312 + (CATA)n Simple_repeat Simple_repeat 1 48 0 224 205 0 39 chr10 70147039 70147117 -75442171 + A-rich Low_complexity Low_complexity 2 76 0 201 400 0 29 chr10 70147286 70147391 -75441897 + MER91A DNA MER1_type 5 106 -90 200 149 21 0 chr10 70147418 70147465 -75441823 + (TA)n Simple_repeat Simple_repeat 2 49 0 404 323 90 20 chr10 70147992 70148151 -75441137 + MIR SINE MIR 42 188 -74 1591 176 40 0 chr10 70148151 70148423 -75440865 + AluSx SINE Alu 3 285 -27 333 0 0 0 chr10 70148423 70148460 -75440828 + (CA)n Simple_repeat Simple_repeat 2 38 0 404 323 90 20 chr10 70148460 70148500 -75440788 + MIR SINE MIR 187 256 -6 2328 110 0 3 chr10 70148549 70148858 -75440430 - AluSx SINE Alu -4 308 1 283 355 57 8 chr10 70149222 70149346 -75439942 + L2 LINE L2 3143 3272 0 3819 161 37 46 chr10 70149457 70150197 -75439091 + LTR39 LTR ERV1 1 735 -48 1731 143 97 26 chr10 70150197 70150547 -75438741 - THE1C LTR MaLR 0 375 1 3819 161 37 46 chr10 70150547 70150589 -75438699 + LTR39 LTR ERV1 735 776 -7 1835 221 82 67 chr10 70150649 70151318 -75437970 + LTR8A LTR ERV1 34 712 -15 183 331 37 37 chr10 70151347 70151483 -75437805 - L2 LINE L2 -17 3296 3161 1228 107 93 28 chr10 70151571 70151787 -75437501 - MER30 DNA MER1_type 0 230 1 400 336 19 43 chr10 70153477 70153688 -75435600 - MIR SINE MIR -55 207 2 24 0 0 0 chr10 70154321 70154345 -75434943 + AT_rich Low_complexity Low_complexity 1 24 0 2193 113 0 0 chr10 70154484 70154776 -75434512 - AluSg SINE Alu -18 292 1 972 251 57 27 chr10 70154841 70155175 -75434113 + MER2 DNA MER2_type 2 345 0 21 36 0 0 chr10 70156387 70156415 -75432873 + AT_rich Low_complexity Low_complexity 1 28 0 319 289 70 9 chr10 70157799 70157913 -75431375 - MIR3 SINE MIR -33 175 55 258 301 75 27 chr10 70157940 70158086 -75431202 + MIR SINE MIR 101 253 -9 21 0 0 0 chr10 70158329 70158350 -75430938 + AT_rich Low_complexity Low_complexity 1 21 0 407 304 45 54 chr10 70158432 70158656 -75430632 - L2 LINE L2 -8 3305 3084 475 343 128 18 chr10 70158943 70159278 -75430010 - L2 LINE L2 -2235 1079 708 2312 100 3 0 chr10 70159354 70159655 -75429633 - AluY SINE Alu -9 302 1 21 0 0 0 chr10 70159657 70159678 -75429610 + AT_rich Low_complexity Low_complexity 1 21 0 384 294 0 0 chr10 70160119 70160211 -75429077 + MER5A DNA MER1_type 18 109 -80 11127 218 45 44 chr10 70161107 70164110 -75425178 + L1M2 LINE L1 3 3049 -3945 2360 125 13 19 chr10 70264244 70264621 -75324667 - THE1C LTR MaLR 0 375 1 198 0 0 0 chr10 70264759 70264781 -75324507 + (A)n Simple_repeat Simple_repeat 1 22 0 247 280 40 0 chr10 70265046 70265121 -75324167 + MLT1L LTR MaLR 4 81 -534 797 254 16 21 chr10 70265176 70265369 -75323919 - MER63A DNA MER1_type -11 199 8 382 289 124 27 chr10 70265371 70265596 -75323692 + MLT1L LTR MaLR 149 395 -220 2067 117 4 4 chr10 70265641 70265945 -75323343 + AluSg SINE Alu 1 304 0 4164 88 0 2 chr10 70265957 70266512 -75322776 + MER41A LTR ERV1 1 554 0 578 255 20 7 chr10 70266553 70266702 -75322586 + MER97c DNA MER1_type? 29 179 -911 2143 76 0 0 chr10 70267080 70267344 -75321944 - AluY SINE Alu -47 264 1 810 251 90 90 chr10 70267349 70267620 -75321668 - L1ME LINE L1 -1487 5157 4887 2273 97 7 10 chr10 70267620 70267919 -75321369 - AluSp SINE Alu -15 298 1 810 251 90 90 chr10 70267919 70268664 -75320624 - L1ME LINE L1 -1757 4887 4131 2260 77 0 26 chr10 70268682 70268995 -75320293 - AluY SINE Alu -6 305 1 2263 258 105 11 chr10 70269045 70270109 -75319179 - L1ME LINE L1 -2821 3823 2660 738 209 68 11 chr10 70270137 70270314 -75318974 + MER58A DNA MER1_type 37 223 -1 1015 270 123 50 chr10 70270316 70271275 -75318013 - L1ME LINE L1 -3981 2663 1533 439 262 53 136 chr10 70271367 70271592 -75317696 - L1ME LINE L1 -5484 1150 908 2248 106 0 3 chr10 70271592 70271904 -75317384 - AluY SINE Alu 0 311 1 439 262 53 136 chr10 70271904 70272296 -75316992 - L1ME LINE L1 -5726 908 584 299 191 128 50 chr10 70272406 70272547 -75316741 - L1M4 LINE L1 -3668 2478 2327 264 322 50 15 chr10 70272812 70273011 -75316277 - L1M4 LINE L1 -3831 2315 2110 4371 199 44 25 chr10 70273181 70274616 -75314672 + L1MB4 LINE L1 4167 5642 -538 1790 169 0 3 chr10 70274616 70274900 -75314388 + AluJb SINE Alu 7 289 -23 4371 199 44 25 chr10 70274900 70275435 -75313853 + L1MB4 LINE L1 5642 6166 -14 327 270 44 88 chr10 70275601 70275805 -75313483 + MIR SINE MIR 68 262 0 2275 115 3 0 chr10 70276018 70276330 -75312958 - AluSp SINE Alu 0 313 1 7300 156 14 10 chr10 70278265 70278430 -75310858 + HSMAR2 DNA Mariner 2 165 -1137 2531 132 8 0 chr10 70278430 70278802 -75310486 - THE1C LTR MaLR 0 375 1 7300 156 14 10 chr10 70278802 70279879 -75309409 + HSMAR2 DNA Mariner 165 1249 -53 40 49 0 0 chr10 70279913 70279974 -75309314 + AT_rich Low_complexity Low_complexity 1 61 0 24 32 0 0 chr10 70280056 70280087 -75309201 + AT_rich Low_complexity Low_complexity 1 31 0 28 29 0 0 chr10 70280178 70280213 -75309075 + AT_rich Low_complexity Low_complexity 1 35 0 799 150 0 27 chr10 70280213 70280360 -75308928 - L1PB4 LINE L1 -1 6155 6013 2233 127 0 0 chr10 70280592 70280899 -75308389 + AluSx SINE Alu 4 310 -2 1790 118 164 78 chr10 70281245 70281617 -75307671 - MER4A LTR ERV1 0 664 261 270 331 129 20 chr10 70282246 70282494 -75306794 + L2 LINE L2 2456 2730 -584 295 395 64 21 chr10 70282643 70282876 -75306412 - L2 LINE L2 -27 3245 3003 314 351 79 12 chr10 70283596 70283795 -75305493 + MIR SINE MIR 3 214 -48 3664 97 39 35 chr10 70284449 70285047 -75304241 - MER4A LTR ERV1 0 600 1 21 0 0 0 chr10 70285418 70285439 -75303849 + AT_rich Low_complexity Low_complexity 1 21 0 34 42 0 0 chr10 70285775 70285823 -75303465 + AT_rich Low_complexity Low_complexity 1 48 0 398 244 58 39 chr10 70286147 70286303 -75302985 + MIR SINE MIR 34 192 -70 372 319 139 6 chr10 70287060 70287226 -75302062 + MIR SINE MIR 60 247 -15 22 0 0 0 chr10 70287486 70287508 -75301780 + AT_rich Low_complexity Low_complexity 1 22 0 1403 179 50 92 chr10 70287517 70287898 -75301390 - MLT1A1 LTR MaLR 0 365 1 276 276 214 35 chr10 70288164 70288309 -75300979 - MIR SINE MIR 0 262 92 269 332 102 76 chr10 70288559 70288981 -75300307 - L2 LINE L2 -1 3312 2880 717 212 6 30 chr10 70289033 70289198 -75300090 - MER20 DNA MER1_type -53 166 6 22 0 0 0 chr10 70290577 70290599 -75298689 + AT_rich Low_complexity Low_complexity 1 22 0 4710 181 39 24 chr10 70291585 70292781 -75296507 - L1MA9 LINE L1 -35 6277 5060 667 196 22 27 chr10 70293049 70293233 -75296055 + MER53 DNA DNA 6 188 -1 184 130 43 0 chr10 70293749 70293795 -75295493 + GA-rich Low_complexity Low_complexity 2 49 0 238 208 56 0 chr10 70293887 70293959 -75295329 + L1ME3A LINE L1 1165 1240 -5169 384 307 92 44 chr10 70294006 70294322 -75294966 + L1ME3A LINE L1 1334 1664 -4923 273 299 91 16 chr10 70294370 70294557 -75294731 + L1ME3A LINE L1 1747 1947 -4640 2198 90 0 10 chr10 70294754 70295066 -75294222 + AluY SINE Alu 1 309 -2 195 129 0 0 chr10 70295214 70295245 -75294043 + (A)n Simple_repeat Simple_repeat 1 31 0 1006 252 40 54 chr10 70295317 70295666 -75293622 + MLT1I LTR MaLR 66 409 0 1840 138 18 64 chr10 70295739 70296129 -75293159 + THE1C LTR MaLR 4 375 0 737 292 45 16 chr10 70296227 70296604 -75292684 + L1ME3A LINE L1 5143 5530 -876 290 210 50 0 chr10 70296605 70296705 -75292583 + (TA)n Simple_repeat Simple_repeat 2 106 0 1097 307 131 10 chr10 70296728 70297402 -75291886 + L1ME3A LINE L1 5581 6335 -95 297 0 0 0 chr10 70298630 70298663 -75290625 + (TA)n Simple_repeat Simple_repeat 2 34 0 265 282 167 0 chr10 70298930 70299164 -75290124 - L1ME4a LINE L1 -56 6065 5793 1875 103 4 19 chr10 70299182 70299453 -75289835 + AluSg1 SINE Alu 4 270 -39 7406 36 0 0 chr10 70299676 70300671 -75288617 - L1PA5 LINE L1 -8 6146 5151 292 159 0 29 chr10 70301874 70301943 -75287345 + GA-rich Low_complexity Low_complexity 4 70 0 505 111 0 0 chr10 70302724 70302796 -75286492 - MER5A DNA MER1_type -84 105 34 3451 132 59 19 chr10 70302799 70303442 -75285846 + LTR34 LTR ERV1 1 669 -30 602 184 18 0 chr10 70304782 70304891 -75284397 - FLAM_C SINE Alu -32 111 1 90 19 0 0 chr10 70304929 70305033 -75284255 + AT_rich Low_complexity Low_complexity 1 104 0 2104 117 0 0 chr10 70306070 70306360 -75282928 - AluSx SINE Alu -11 301 12 405 54 0 0 chr10 70306380 70306436 -75282852 + (TC)n Simple_repeat Simple_repeat 1 56 0 26 0 0 0 chr10 70307741 70307767 -75281521 + AT_rich Low_complexity Low_complexity 1 26 0 35 54 0 0 chr10 70307841 70307897 -75281391 + AT_rich Low_complexity Low_complexity 1 56 0 219 139 0 42 chr10 70308011 70308083 -75281205 + (TA)n Simple_repeat Simple_repeat 2 70 0 721 191 7 15 chr10 70308628 70308764 -75280524 - AluJo SINE Alu -177 135 1 271 338 210 4 chr10 70309205 70309593 -75279695 - L2 LINE L2 -203 3069 2559 2400 77 0 0 chr10 70310071 70310371 -75278917 - AluY SINE Alu -11 300 1 383 266 0 65 chr10 70311020 70311159 -75278129 + FLAM_A SINE Alu 1 130 -3 449 284 84 7 chr10 70311174 70311329 -75277959 - MIR SINE MIR -70 192 26 244 407 9 9 chr10 70312631 70312739 -75276549 - MIR SINE MIR -80 128 21 441 298 106 0 chr10 70312741 70312902 -75276386 + MIR SINE MIR 84 261 -1 201 39 0 0 chr10 70313085 70313111 -75276177 + (A)n Simple_repeat Simple_repeat 1 26 0 2027 126 0 14 chr10 70313119 70313413 -75275875 + AluSq SINE Alu 1 290 -23 871 197 49 45 chr10 70313448 70313764 -75275524 - MER69 DNA AcHobo -11 2515 2161 566 128 11 0 chr10 70313874 70313968 -75275320 - MER69 DNA AcHobo -887 339 245 408 291 10 0 chr10 70313977 70314080 -75275208 - MER69 DNA AcHobo -1095 131 28 26 30 0 0 chr10 70314600 70314633 -75274655 + AT_rich Low_complexity Low_complexity 1 33 0 13683 28 1 0 chr10 70314930 70317192 -75272096 - L1PA4 LINE L1 -140 6015 3752 497 320 77 27 chr10 70317208 70317508 -75271780 + L2 LINE L2 2999 3313 0 934 335 71 32 chr10 70317876 70318372 -75270916 + L3 LINE CR1 1057 1571 -6 286 316 281 13 chr10 70318450 70318681 -75270607 + L3 LINE CR1 579 871 -706 38 61 0 0 chr10 70318950 70319016 -75270272 + AT_rich Low_complexity Low_complexity 1 66 0 324 294 20 0 chr10 70319177 70319279 -75270009 + U13 snRNA snRNA 1 104 0 186 358 37 0 chr10 70319323 70319404 -75269884 + L3 LINE CR1 1022 1105 -472 352 313 28 67 chr10 70319409 70319588 -75269700 + L3 LINE CR1 1401 1572 -5 417 232 141 0 chr10 70320076 70320175 -75269113 + L2 LINE L2 3199 3311 -2 514 347 163 21 chr10 70322141 70322914 -75266374 - L2 LINE L2 -573 2741 1859 5056 129 63 30 chr10 70323087 70324035 -75265253 - L1MA4 LINE L1 -4 6296 5317 446 196 203 0 chr10 70324046 70324179 -75265109 + MER58B DNA MER1_type 167 326 -15 389 85 0 17 chr10 70324180 70324239 -75265049 - L1PA13 LINE L1 -19 6795 6738 18463 178 18 13 chr10 70324334 70325153 -75264135 - L1PA13 LINE L1 -88 6726 5913 1970 142 3 13 chr10 70325153 70325455 -75263833 + AluSx SINE Alu 1 299 -13 18463 178 18 13 chr10 70325455 70330224 -75259064 - L1PA13 LINE L1 -901 5913 1110 7794 193 14 14 chr10 70330228 70331909 -75257379 - L1MA4 LINE L1 -817 5329 3649 5912 174 31 8 chr10 70335382 70336560 -75252728 - L1 LINE L1 -1268 4942 3739 3878 229 52 128 chr10 70336577 70336959 -75252329 - L1 LINE L1 -4183 2028 1618 414 39 0 0 chr10 70336959 70337011 -75252277 + (TA)n Simple_repeat Simple_repeat 2 53 0 3878 229 52 128 chr10 70337011 70337022 -75252266 - L1 LINE L1 -4593 1618 1608 598 138 0 0 chr10 70337022 70337109 -75252179 - AluJ/FLAM SINE Alu -210 102 16 3878 229 52 128 chr10 70337109 70338563 -75250725 - L1 LINE L1 -4603 1608 45 1210 210 59 39 chr10 70338563 70338688 -75250600 + AluJo SINE Alu 1 122 -180 252 0 0 0 chr10 70338688 70338716 -75250572 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 1210 210 59 39 chr10 70338716 70338876 -75250412 + AluJo SINE Alu 122 292 -10 2101 98 25 0 chr10 70338882 70339187 -75250101 + AluSx SINE Alu 1 312 0 3878 229 52 128 chr10 70339187 70339510 -75249778 - L1 LINE L1 -6171 40 1 757 289 40 20 chr10 70339529 70339782 -75249506 - MIR SINE MIR 0 262 5 1090 294 179 30 chr10 70339846 70340835 -75248453 - L2 LINE L2 -265 3048 1917 812 219 47 0 chr10 70340946 70341115 -75248173 + MER5A DNA MER1_type 2 178 -11 273 283 113 0 chr10 70341125 70341231 -75248057 - MER63A DNA MER1_type 0 210 93 341 327 9 9 chr10 70341311 70341421 -75247867 - MER5A DNA MER1_type -76 113 4 276 323 87 8 chr10 70342018 70342145 -75247143 + L3 LINE CR1 459 595 -982 253 252 63 36 chr10 70342191 70342302 -75246986 - MIR SINE MIR 0 262 149 839 329 134 32 chr10 70342332 70343013 -75246275 + L3 LINE CR1 685 1434 -143 205 345 0 0 chr10 70343251 70343309 -75245979 + L2 LINE L2 3212 3269 -3 502 230 62 67 chr10 70344171 70344349 -75244939 + MIR3 SINE MIR 19 195 -13 264 351 53 60 chr10 70345319 70345584 -75243704 + MLT1K LTR MaLR 323 585 -3 330 84 11 11 chr10 70345898 70345954 -75243334 + L1M2 LINE L1 2350 2432 -4417 5085 228 26 22 chr10 70346065 70351187 -75238101 + L1PB3 LINE L1 9 4343 -2527 237 33 0 0 chr10 70351187 70351217 -75238071 + (CAA)n Simple_repeat Simple_repeat 2 31 0 5085 228 26 22 chr10 70351217 70353738 -75235550 + L1PB3 LINE L1 4343 6853 -17 1810 176 47 96 chr10 70353740 70354056 -75235232 + L1MDa LINE L1 925 1198 -5342 897 131 34 11 chr10 70354056 70354232 -75235056 + L1MA4 LINE L1 6120 6299 -1 1810 176 47 96 chr10 70354232 70354528 -75234760 + L1MDa LINE L1 1198 1507 -5033 1470 171 59 18 chr10 70354532 70354872 -75234416 + L1MDa LINE L1 1644 1997 -4543 8958 201 17 16 chr10 70355262 70357514 -75231774 + L1PA16 LINE L1 3228 5480 -686 2856 19 0 9 chr10 70357514 70357835 -75231453 + AluYb8 SINE Alu 1 318 0 8958 201 17 16 chr10 70357835 70358514 -75230774 + L1PA16 LINE L1 5480 6157 -9 509 250 28 21 chr10 70358537 70358681 -75230607 + MER5A DNA MER1_type 43 187 -2 496 262 75 42 chr10 70359149 70359363 -75229925 + MIR SINE MIR 2 222 -40 332 315 28 35 chr10 70359479 70359622 -75229666 + MIR SINE MIR 28 169 -93 2151 119 3 0 chr10 70362448 70362743 -75226545 - AluSx SINE Alu -16 296 1 236 213 21 21 chr10 70362832 70362879 -75226409 + MIR SINE MIR 3 49 -213 403 343 34 34 chr10 70363289 70363464 -75225824 + MIR SINE MIR 32 206 -56 26 0 0 0 chr10 70364129 70364155 -75225133 + AT_rich Low_complexity Low_complexity 1 26 0 2157 94 0 4 chr10 70364257 70364534 -75224754 + AluSc SINE Alu 1 276 -33 306 0 0 0 chr10 70364534 70364568 -75224720 + (CAAAA)n Simple_repeat Simple_repeat 1 34 0 880 286 73 38 chr10 70365626 70366049 -75223239 + LTR33 LTR ERVL 37 474 -47 313 358 6 16 chr10 70366105 70366263 -75223025 + MIR SINE MIR 17 169 -39 2004 165 0 0 chr10 70367394 70367703 -75221585 - AluSx SINE Alu -3 309 1 1411 148 42 8 chr10 70368568 70368804 -75220484 - THE1B LTR MaLR -113 251 8 485 251 97 68 chr10 70369903 70370214 -75219074 - MLT1H LTR MaLR 0 549 230 2018 146 10 79 chr10 70370226 70370629 -75218659 + THE1C LTR MaLR 1 375 0 403 269 106 19 chr10 70370630 70370838 -75218450 + MER113 DNA MER1_type? 293 518 -3 1906 164 9 18 chr10 70371324 70371666 -75217622 + MER44D DNA MER2_type 1 609 0 317 322 0 62 chr10 70372292 70372438 -75216850 + MER5A DNA MER1_type 23 159 -30 914 266 52 7 chr10 70373290 70373576 -75215712 - MLT1A1 LTR MaLR 0 365 67 1425 200 22 7 chr10 70373905 70374175 -75215113 - MLT2C1 LTR ERVL -41 356 83 1563 173 11 71 chr10 70374180 70374545 -75214743 - MER82 DNA MER2_type -239 414 72 212 0 36 0 chr10 70374589 70374617 -75214671 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 546 134 0 12 chr10 70374621 70374703 -75214585 - FRAM SINE Alu -31 145 65 199 342 18 18 chr10 70376790 70376901 -75212387 + L3b LINE CR1 1127 1237 -346 273 303 8 42 chr10 70377026 70377145 -75212143 - MIR SINE MIR -71 137 23 269 341 0 0 chr10 70377144 70377232 -75212056 + MIR SINE MIR 173 260 -2 * 617 139 6 151 chr10 70377486 70377658 -75211630 + Tigger2a DNA MER2_type 1 147 -287 1763 173 29 32 chr10 70377970 70378317 -75210971 - MER7A DNA MER2_type -2 344 1 870 233 12 74 chr10 70378318 70378389 -75210899 + L1M4 LINE L1 4791 4865 -1281 1052 139 139 20 chr10 70378389 70378591 -75210697 + MER30 DNA MER1_type 1 226 -4 870 233 12 74 chr10 70378591 70378845 -75210443 + L1M4 LINE L1 4865 5096 -1050 2434 164 69 4 chr10 70380142 70380604 -75208684 - L1MB4 LINE L1 -2 6178 5687 343 171 22 0 chr10 70380620 70380697 -75208591 - MSTA LTR MaLR -12 416 273 229 262 60 0 chr10 70384372 70384456 -75204832 - L1MC4 LINE L1 -1339 6703 6615 1220 152 91 16 chr10 70384723 70384966 -75204322 + Tigger1 DNA MER2_type 2153 2413 -5 264 176 66 0 chr10 70385954 70386045 -75203243 + (TG)n Simple_repeat Simple_repeat 1 97 0 2034 155 45 24 chr10 70386431 70386811 -75202477 - MER61D LTR ERV1 0 501 114 295 228 8 36 chr10 70386845 70386947 -75202341 - L1MEc LINE L1 -3907 2261 2137 339 113 0 0 chr10 70387483 70387536 -75201752 + (TCCC)n Simple_repeat Simple_repeat 4 56 0 2157 112 0 14 chr10 70388724 70389019 -75200269 + AluSq SINE Alu 1 291 -22 210 306 41 0 chr10 70389075 70389124 -75200164 - L2 LINE L2 -29 3243 3193 258 304 87 72 chr10 70389543 70389889 -75199399 - L2 LINE L2 -2625 689 339 2213 119 0 0 chr10 70390050 70390351 -75198937 + LTR8A LTR ERV1 1 301 -426 1281 104 0 0 chr10 70390351 70390524 -75198764 - MER4E LTR ERV1 0 766 594 8457 30 1 0 chr10 70392484 70394250 -75195038 - L1HS LINE L1 -24 6131 4365 8804 56 14 2 chr10 70394760 70395901 -75193387 + L1P LINE L1 3210 4364 -1782 2085 129 0 10 chr10 70396163 70396472 -75192816 + AluSx SINE Alu 1 306 -6 867 192 66 0 chr10 70402721 70402872 -75186416 - FRAM SINE Alu -2 164 4 324 316 89 32 chr10 70403440 70403630 -75185658 - MIR3 SINE MIR -7 201 1 212 288 41 0 chr10 70403825 70403898 -75185390 + MIR3 SINE MIR 127 202 -6 347 111 16 63 chr10 70404638 70404701 -75184587 + MADE1 DNA Mariner 1 60 -20 262 90 15 104 chr10 70404697 70404764 -75184524 - HSMAR1 DNA Mariner -1226 61 1 * 198 0 0 0 chr10 70405748 70405770 -75183518 + (A)n Simple_repeat Simple_repeat 1 22 0 192 40 0 0 chr10 70406562 70406587 -75182701 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 2070 108 0 74 chr10 70407577 70407901 -75181387 + AluSq SINE Alu 1 300 -13 347 163 12 0 chr10 70408766 70408846 -75180442 + (TA)n Simple_repeat Simple_repeat 2 82 0 1144 163 20 0 chr10 70409573 70409775 -75179513 - MER2 DNA MER2_type -135 210 5 2012 133 7 10 chr10 70410132 70410433 -75178855 + L1PB3 LINE L1 5845 6144 -10 248 250 26 0 chr10 70411010 70411086 -75178202 - MIR SINE MIR -10 252 175 2248 102 3 0 chr10 70411616 70411909 -75177379 + AluSq SINE Alu 1 294 -19 204 327 40 20 chr10 70412083 70412184 -75177104 + MIR SINE MIR 159 261 -1 1269 92 0 17 chr10 70412348 70412521 -75176767 + L1PB1 LINE L1 5507 5676 -498 2376 88 3 9 chr10 70412522 70412839 -75176449 + L1PB1 LINE L1 5836 6150 -1 2429 70 0 7 chr10 70412860 70413158 -75176130 + AluY SINE Alu 1 296 -15 3739 104 18 6 chr10 70413159 70413658 -75175630 + L1PA11 LINE L1 5664 6168 -6 243 249 95 44 chr10 70413736 70413874 -75175414 + MLT1J2 LTR MaLR 300 401 -49 183 80 0 0 chr10 70414452 70414477 -75174811 + (TCCC)n Simple_repeat Simple_repeat 4 28 0 186 196 43 22 chr10 70415243 70415289 -75173999 - L2 LINE L2 0 3313 3267 1673 109 4 0 chr10 70415441 70415670 -75173618 - THE1C LTR MaLR -3 372 143 252 0 0 0 chr10 70416170 70416198 -75173090 + (TTG)n Simple_repeat Simple_repeat 3 30 0 232 274 0 32 chr10 70416225 70416287 -75173001 + MER5B DNA MER1_type 18 77 -101 476 293 0 88 chr10 70416488 70416669 -75172619 + L3 LINE CR1 1321 1485 -92 1819 175 0 0 chr10 70417446 70417743 -75171545 + AluSx SINE Alu 7 303 -9 209 327 47 19 chr10 70418862 70418969 -75170319 - MIR SINE MIR -63 145 36 216 0 0 0 chr10 70419845 70419869 -75169419 + (TTTTTA)n Simple_repeat Simple_repeat 2 25 0 1888 92 114 7 chr10 70421514 70421787 -75167501 - AluSg1 SINE Alu -7 302 1 326 271 72 55 chr10 70422495 70422787 -75166501 - L1ME LINE L1 -581 5589 5293 22 0 0 0 chr10 70422834 70422856 -75166432 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr10 70422903 70422924 -75166364 + AT_rich Low_complexity Low_complexity 1 21 0 256 289 12 0 chr10 70423236 70423319 -75165969 + (TA)n Simple_repeat Simple_repeat 2 85 0 1728 26 0 0 chr10 70423414 70423606 -75165682 - L1PA3 LINE L1 -5 6150 5959 231 343 63 49 chr10 70424755 70424898 -75164390 + L2 LINE L2 2918 3062 -210 25 0 0 0 chr10 70425070 70425095 -75164193 + AT_rich Low_complexity Low_complexity 1 25 0 438 316 176 13 chr10 70425682 70426058 -75163230 - L2 LINE L2 -932 2382 1946 527 58 145 0 chr10 70426307 70426376 -75162912 + MADE1 DNA Mariner 1 79 -1 349 313 96 87 chr10 70426621 70427068 -75162220 + L2 LINE L2 2863 3313 0 22 0 0 0 chr10 70427389 70427411 -75161877 + AT_rich Low_complexity Low_complexity 1 22 0 205 208 19 38 chr10 70427760 70427813 -75161475 - L2 LINE L2 -1 3312 3261 358 342 97 49 chr10 70428186 70429086 -75160202 + L1MC4a LINE L1 3643 4585 -1561 2297 114 0 3 chr10 70429176 70429484 -75159804 + AluSq SINE Alu 1 307 -6 382 276 180 13 chr10 70429706 70430255 -75159033 + L1MC4a LINE L1 5238 5820 -301 2470 72 0 0 chr10 70430303 70430595 -75158693 + AluY SINE Alu 1 292 -19 309 341 12 54 chr10 70430913 70431080 -75158208 + HAL1b LINE L1 1189 1348 0 324 0 0 0 chr10 70431477 70431513 -75157775 + (TG)n Simple_repeat Simple_repeat 2 37 0 414 0 0 0 chr10 70432895 70432941 -75156347 + (TG)n Simple_repeat Simple_repeat 1 46 0 27 0 0 0 chr10 70433315 70433342 -75155946 + AT_rich Low_complexity Low_complexity 1 27 0 831 322 49 33 chr10 70437105 70437534 -75151754 + LTR16A LTR ERVL 20 455 -2 338 267 25 58 chr10 70438227 70438347 -75150941 + MLT1G1 LTR MaLR 1 116 -479 * 493 176 0 22 chr10 70438344 70438435 -75150853 + MLT1F1 LTR MaLR 472 560 -7 426 20 0 0 chr10 70439158 70439209 -75150079 + (CA)n Simple_repeat Simple_repeat 2 52 0 22 0 0 0 chr10 70439547 70439569 -75149719 + AT_rich Low_complexity Low_complexity 1 22 0 226 145 81 0 chr10 70439893 70439955 -75149333 + (TAGA)n Simple_repeat Simple_repeat 2 68 0 1649 201 0 4 chr10 70440878 70441157 -75148131 + AluJb SINE Alu 1 278 -34 336 77 0 0 chr10 70441157 70441209 -75148079 + (TCTG)n Simple_repeat Simple_repeat 2 53 0 294 124 72 21 chr10 70441209 70441306 -75147982 + (TA)n Simple_repeat Simple_repeat 2 103 0 275 146 18 0 chr10 70441354 70441409 -75147879 + (TA)n Simple_repeat Simple_repeat 2 57 0 2059 184 47 83 chr10 70441455 70442031 -75147257 - L1MD2 LINE L1 -24 6335 5781 1381 228 77 63 chr10 70442033 70442460 -75146828 - L1MD2 LINE L1 -914 5232 4791 1975 162 27 15 chr10 70442460 70442793 -75146495 + MER1B DNA MER1_type 1 337 0 1381 228 77 63 chr10 70442793 70443031 -75146257 - L1MD2 LINE L1 -1355 4791 4558 180 111 0 0 chr10 70443911 70443938 -75145350 + (A)n Simple_repeat Simple_repeat 1 27 0 219 290 16 0 chr10 70444001 70444063 -75145225 + L2 LINE L2 3210 3272 0 2291 81 0 29 chr10 70444413 70444720 -75144568 - AluY SINE Alu -13 298 1 422 279 0 9 chr10 70445047 70445158 -75144130 - MER5B DNA MER1_type 0 178 69 703 320 80 59 chr10 70445563 70446123 -75143165 - L2 LINE L2 -840 2474 1903 2351 223 113 38 chr10 70446162 70446902 -75142386 + L1MA8 LINE L1 10 805 -6225 1354 217 2 130 chr10 70446901 70447407 -75141881 + L1MA8 LINE L1 3492 3932 -3174 * 4214 114 41 123 chr10 70447408 70448305 -75140983 - LTR12 LTR ERV1 0 826 3 1776 208 76 28 chr10 70448316 70448893 -75140395 - pTR5 LTR ERV1 -1088 1350 746 11283 169 35 9 chr10 70448893 70452128 -75137160 + L1MA8 LINE L1 3927 7247 -4 408 305 107 40 chr10 70452250 70452699 -75136589 - L2 LINE L2 -1594 1720 1242 475 289 144 0 chr10 70452881 70453054 -75136234 - MIR SINE MIR 0 262 65 724 318 104 34 chr10 70453074 70453489 -75135799 + L3 LINE CR1 1124 1567 -10 242 28 0 28 chr10 70453719 70453755 -75135533 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 24 0 0 0 chr10 70454573 70454597 -75134691 + AT_rich Low_complexity Low_complexity 1 24 0 303 93 0 0 chr10 70455114 70455157 -75134131 + (TC)n Simple_repeat Simple_repeat 2 44 0 347 272 43 0 chr10 70455157 70455249 -75134039 + MIR3 SINE MIR 110 205 -3 22 0 0 0 chr10 70455277 70455299 -75133989 + AT_rich Low_complexity Low_complexity 1 22 0 1761 170 18 0 chr10 70455606 70455889 -75133399 - AluSx SINE Alu -23 289 2 183 80 0 0 chr10 70455910 70455935 -75133353 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 668 308 95 43 chr10 70455937 70456086 -75133202 - L2 LINE L2 0 3313 3173 312 27 0 0 chr10 70456086 70456123 -75133165 + (CA)n Simple_repeat Simple_repeat 1 37 0 668 308 95 43 chr10 70456123 70456321 -75132967 - L2 LINE L2 -140 3173 2948 2179 169 0 8 chr10 70456439 70456806 -75132482 + MLT1A1 LTR MaLR 1 364 -1 754 203 0 0 chr10 70456890 70457023 -75132265 - FLAM_C SINE Alu 0 133 1 913 300 83 12 chr10 70457507 70457844 -75131444 + L2 LINE L2 2898 3258 -55 273 254 0 0 chr10 70457906 70457969 -75131319 + MIR SINE MIR 200 262 0 2134 98 120 0 chr10 70458080 70458397 -75130891 - THE1A LTR MaLR 0 355 1 209 32 0 32 chr10 70458539 70458570 -75130718 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 337 203 0 0 chr10 70458992 70459066 -75130222 + MER53 DNA DNA 113 186 -3 1519 279 53 78 chr10 70459191 70459995 -75129293 + L2 LINE L2 1179 1962 -1352 590 252 45 19 chr10 70460021 70460176 -75129112 + L2 LINE L2 2647 2805 -509 29 0 0 0 chr10 70460986 70461015 -75128273 + AT_rich Low_complexity Low_complexity 1 29 0 195 69 0 0 chr10 70461783 70461812 -75127476 + (A)n Simple_repeat Simple_repeat 1 29 0 219 225 44 19 chr10 70461819 70461892 -75127396 + MER5B DNA MER1_type 87 167 -22 267 179 54 0 chr10 70461958 70462014 -75127274 - MIR SINE MIR -126 136 78 311 343 71 30 chr10 70462898 70463096 -75126192 - MIR3 SINE MIR 0 208 3 640 312 146 93 chr10 70463173 70463644 -75125644 - L3 LINE CR1 -6 1571 1127 583 218 45 74 chr10 70463644 70463887 -75125401 + MER106A DNA MER1_type 1 236 0 640 312 146 93 chr10 70463887 70464600 -75124688 - L3 LINE CR1 -450 1127 324 324 0 0 0 chr10 70465322 70465358 -75123930 + (TG)n Simple_repeat Simple_repeat 1 36 0 183 184 0 0 chr10 70465358 70465396 -75123892 + (CATATA)n Simple_repeat Simple_repeat 2 39 0 21 36 0 0 chr10 70465402 70465430 -75123858 + AT_rich Low_complexity Low_complexity 1 28 0 2154 126 3 0 chr10 70465430 70465732 -75123556 + AluSx SINE Alu 1 303 -9 2256 102 10 0 chr10 70466163 70466467 -75122821 + AluSx SINE Alu 3 309 -3 1530 239 71 105 chr10 70467058 70467703 -75121585 - MLT1E2 LTR MaLR -1 625 1 948 236 23 54 chr10 70468600 70468858 -75120430 + MIR SINE MIR 13 262 0 188 333 24 49 chr10 70469132 70469255 -75120033 - L2 LINE L2 0 3272 3153 34 55 0 0 chr10 70469823 70469878 -75119410 + AT_rich Low_complexity Low_complexity 1 55 0 207 0 0 0 chr10 70470680 70470703 -75118585 + (TTTTTA)n Simple_repeat Simple_repeat 2 24 0 289 287 75 59 chr10 70470758 70471012 -75118276 - HAL1 LINE L1 -999 1508 1251 319 273 136 23 chr10 70471268 70471400 -75117888 + MIR SINE MIR 4 150 -112 189 0 0 0 chr10 70473008 70473029 -75116259 + (CA)n Simple_repeat Simple_repeat 2 22 0 197 345 36 0 chr10 70473970 70474054 -75115234 + MIR3 SINE MIR 74 160 -48 714 216 208 19 chr10 70474175 70474360 -75114928 - MER5C DNA MER1_type -1 323 174 2616 99 3 29 chr10 70474360 70474734 -75114554 + THE1B LTR MaLR 1 364 0 714 216 208 19 chr10 70474734 70474817 -75114471 - MER5C DNA MER1_type -150 174 4 212 152 43 0 chr10 70475333 70475379 -75113909 + (CATA)n Simple_repeat Simple_repeat 4 51 0 795 330 78 54 chr10 70475685 70476458 -75112830 - L2 LINE L2 -342 2972 2182 1801 121 39 18 chr10 70476907 70477068 -75112220 - AluSc SINE Alu -22 287 116 272 48 24 0 chr10 70477068 70477110 -75112178 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 1801 121 39 18 chr10 70477110 70477229 -75112059 - AluSc SINE Alu -193 116 1 220 361 18 57 chr10 70477599 70477823 -75111465 - L2 LINE L2 -251 3021 2814 463 105 0 0 chr10 70479566 70479642 -75109646 - L1PA16 LINE L1 0 6166 6091 299 221 0 29 chr10 70479769 70479837 -75109451 + MIR SINE MIR 99 164 -98 210 333 30 52 chr10 70479922 70480057 -75109231 + MIR SINE MIR 85 216 -46 733 216 14 7 chr10 70481084 70481232 -75108056 + MER20 DNA MER1_type 65 213 -6 264 244 23 0 chr10 70482052 70482138 -75107150 + L1MC4 LINE L1 6614 6701 -1341 365 239 0 22 chr10 70482154 70482246 -75107042 + L1MC4 LINE L1 6614 6703 -1339 2577 58 0 6 chr10 70482258 70482571 -75106717 - AluY SINE Alu 0 311 1 306 367 68 17 chr10 70482690 70482867 -75106421 + MIR3 SINE MIR 20 205 -3 288 294 88 29 chr10 70482951 70483121 -75106167 - MLT1K LTR MaLR -30 558 379 1261 174 10 0 chr10 70483167 70483368 -75105920 + AluJb SINE Alu 86 288 -24 267 395 31 19 chr10 70483424 70483586 -75105702 - MLT1K LTR MaLR -300 288 125 221 319 29 65 chr10 70484335 70484473 -75104815 + L2 LINE L2 3177 3309 -4 282 56 0 0 chr10 70484618 70484654 -75104634 + (CA)n Simple_repeat Simple_repeat 2 37 0 621 294 114 68 chr10 70485128 70485589 -75103699 + L2 LINE L2 2714 3225 -88 2227 58 38 14 chr10 70485589 70485880 -75103408 + AluY SINE Alu 1 298 -13 621 294 114 68 chr10 70485880 70485964 -75103324 + L2 LINE L2 3225 3304 -9 22 35 0 0 chr10 70486442 70486471 -75102817 + AT_rich Low_complexity Low_complexity 1 29 0 279 200 141 0 chr10 70487130 70487215 -75102073 - MER58 DNA MER1_type -142 199 103 5617 28 5 0 chr10 70487216 70487871 -75101417 - L1PA3 LINE L1 0 6155 5498 29270 47 1 2 chr10 70487871 70491498 -75097790 + L1P LINE L1 12 3633 -2513 342 198 99 40 chr10 70491498 70491599 -75097689 - MER58 DNA MER1_type -2305 115 9 203 306 42 0 chr10 70492282 70492354 -75096934 + MIR SINE MIR 114 188 -74 1528 174 71 21 chr10 70493545 70493826 -75095462 + AluJb SINE Alu 4 298 -14 21 0 0 0 chr10 70493829 70493850 -75095438 + AT_rich Low_complexity Low_complexity 1 21 0 371 153 0 12 chr10 70494090 70494175 -75095113 + (TA)n Simple_repeat Simple_repeat 2 85 0 224 266 25 0 chr10 70494316 70494395 -75094893 + (TA)n Simple_repeat Simple_repeat 2 82 0 209 286 26 0 chr10 70495886 70495963 -75093325 + (CATATA)n Simple_repeat Simple_repeat 2 80 0 2507 137 19 43 chr10 70495994 70496461 -75092827 - L1M2 LINE L1 -540 5772 5317 185 207 0 35 chr10 70496467 70496525 -75092763 + (CATATA)n Simple_repeat Simple_repeat 4 59 0 2222 86 17 0 chr10 70496558 70496848 -75092440 - AluSp SINE Alu -18 295 1 2956 185 41 25 chr10 70496850 70497563 -75091725 - L1M2 LINE L1 -815 5331 4608 267 175 0 50 chr10 70497861 70497941 -75091347 - L1MA10 LINE L1 -3 6331 6256 3701 222 97 33 chr10 70497963 70498632 -75090656 - L1M4 LINE L1 -1197 4949 4324 15806 134 26 30 chr10 70498632 70499367 -75089921 - Tigger4(Zombi) DNA MER2_type -1 2730 1994 1974 86 0 8 chr10 70499367 70499622 -75089666 + AluSq SINE Alu 54 306 -7 288 0 0 0 chr10 70499624 70499656 -75089632 + (TAG)n Simple_repeat Simple_repeat 2 33 0 186 43 0 0 chr10 70499659 70499682 -75089606 + (TCG)n Simple_repeat Simple_repeat 2 24 0 15806 134 26 30 chr10 70499682 70501680 -75087608 - Tigger4(Zombi) DNA MER2_type -740 1991 1 3701 222 97 33 chr10 70501680 70501763 -75087525 - L1M4 LINE L1 -1822 4324 4248 234 91 0 0 chr10 70501763 70501796 -75087492 + (TTCA)n Simple_repeat Simple_repeat 3 35 0 3701 222 97 33 chr10 70501796 70502405 -75086883 - L1M4 LINE L1 -1898 4248 3500 451 260 7 14 chr10 70502404 70502550 -75086738 - L1M4 LINE L1 -3493 2653 2509 * 235 213 0 0 chr10 70503121 70503168 -75086120 + CT-rich Low_complexity Low_complexity 1 47 0 1595 191 0 92 chr10 70505101 70505526 -75083762 - MLT1B LTR MaLR -4 386 1 339 287 86 46 chr10 70505591 70505765 -75083523 - L3 LINE CR1 -3 1574 1394 437 322 49 6 chr10 70506937 70507120 -75082168 - MIR3 SINE MIR -1 207 17 23 33 0 0 chr10 70507198 70507228 -75082060 + AT_rich Low_complexity Low_complexity 1 30 0 201 167 0 0 chr10 70508143 70508179 -75081109 + A-rich Low_complexity Low_complexity 1 36 0 1990 113 3 68 chr10 70508434 70508760 -75080528 - AluSx SINE Alu -3 309 5 258 125 0 0 chr10 70509456 70509504 -75079784 + (TC)n Simple_repeat Simple_repeat 1 48 0 357 244 32 73 chr10 70510674 70510797 -75078491 + Zaphod DNA AcHobo 3914 4031 0 229 329 139 56 chr10 70511281 70511504 -75077784 + L2 LINE L2 2439 2642 -672 1139 163 11 0 chr10 70511504 70511688 -75077600 + MER5A DNA MER1_type 1 186 -3 229 329 139 56 chr10 70511688 70511875 -75077413 + L2 LINE L2 2642 2883 -431 1315 211 87 19 chr10 70512316 70512729 -75076559 - Zaphod DNA AcHobo -1 4030 3590 * 1925 264 87 17 chr10 70512718 70513604 -75075684 - Zaphod DNA AcHobo -3039 992 2 1721 184 25 78 chr10 70513746 70514143 -75075145 + MLT2C2 LTR ERVL 24 399 -65 228 348 0 0 chr10 70514309 70514378 -75074910 + L2 LINE L2 3116 3184 -88 255 108 48 60 chr10 70515493 70515576 -75073712 + (TATAA)n Simple_repeat Simple_repeat 1 82 0 524 244 17 9 chr10 70515579 70515694 -75073594 + L2 LINE L2 3193 3308 -5 2218 110 3 3 chr10 70517445 70517754 -75071534 + AluSx SINE Alu 1 309 -3 360 257 53 18 chr10 70517886 70517999 -75071289 - MER5B DNA MER1_type -61 117 1 316 259 9 17 chr10 70518293 70518409 -75070879 + Charlie7 DNA MER1_type 2498 2612 0 2405 74 0 0 chr10 70518991 70519287 -75070001 + AluY SINE Alu 1 296 -15 1582 186 14 31 chr10 70521802 70522152 -75067136 + MER2 DNA MER2_type 1 344 0 541 343 105 39 chr10 70523270 70523602 -75065686 + L3 LINE CR1 929 1282 -295 466 308 34 82 chr10 70523942 70524150 -75065138 + L3 LINE CR1 1374 1571 -6 383 308 109 0 chr10 70524997 70525153 -75064135 + MLT1J LTR MaLR 16 188 -323 2649 166 11 35 chr10 70525178 70525480 -75063808 - L1P LINE L1 -842 5304 5019 1873 162 13 0 chr10 70525480 70525782 -75063506 - AluSx SINE Alu -6 306 1 2649 166 11 35 chr10 70525782 70526021 -75063267 - L1P LINE L1 -1127 5019 4776 803 223 97 0 chr10 70526338 70526544 -75062744 - MIR SINE MIR -4 258 33 282 132 0 0 chr10 70526799 70526852 -75062436 + (GA)n Simple_repeat Simple_repeat 2 54 0 266 114 0 0 chr10 70527768 70527803 -75061485 - Alu SINE Alu -262 39 5 22 0 0 0 chr10 70528130 70528152 -75061136 + AT_rich Low_complexity Low_complexity 1 22 0 387 0 0 0 chr10 70528210 70528253 -75061035 + (CA)n Simple_repeat Simple_repeat 2 44 0 548 325 50 39 chr10 70528293 70528573 -75060715 + L2 LINE L2 3031 3313 0 233 276 0 0 chr10 70529382 70529440 -75059848 + (CAT)n Simple_repeat Simple_repeat 2 59 0 207 100 0 0 chr10 70529684 70529714 -75059574 + (GAAAA)n Simple_repeat Simple_repeat 5 34 0 4739 157 40 0 chr10 70531497 70532282 -75057006 - MSTA-int LTR MaLR -835 816 1 2716 131 24 5 chr10 70532282 70532702 -75056586 - MSTA LTR MaLR 0 428 1 316 240 87 146 chr10 70533417 70533671 -75055617 + L3 LINE CR1 1047 1285 -292 348 310 148 7 chr10 70533837 70533992 -75055296 - MER20B DNA MER1_type -606 177 1 360 243 81 9 chr10 70533999 70534110 -75055178 - MIR SINE MIR -27 235 117 1452 320 36 33 chr10 70535725 70536401 -75052887 + L2 LINE L2 2459 3140 -173 299 236 34 34 chr10 70536932 70537021 -75052267 + L2 LINE L2 2472 2560 -754 21 0 0 0 chr10 70538835 70538856 -75050432 + AT_rich Low_complexity Low_complexity 1 21 0 4539 113 4 6 chr10 70539218 70539933 -75049355 - L1P LINE L1 -1911 4235 3522 601 119 10 0 chr10 70543200 70543301 -75045987 + L1P LINE L1 2046 2147 -3999 * 7460 46 1 6 chr10 70543297 70544320 -75044968 - L1P LINE L1 -2581 3565 2548 310 220 60 30 chr10 70545827 70545927 -75043361 + L1 LINE L1 3047 3149 -2997 538 325 94 14 chr10 70546096 70546646 -75042642 + L1 LINE L1 3345 3938 -2208 332 328 0 1 chr10 70547427 70547527 -75041761 + MIR SINE MIR 8 106 -102 1829 191 32 0 chr10 70547530 70547871 -75041417 - MLT1A1 LTR MaLR -5 360 9 197 247 101 45 chr10 70547897 70547986 -75041302 + MIR SINE MIR 128 221 -41 1744 178 7 3 chr10 70548011 70548314 -75040974 - AluJb SINE Alu -8 304 1 909 253 90 4 chr10 70548329 70548562 -75040726 - MIR SINE MIR -5 257 5 6915 134 22 6 chr10 70548893 70550112 -75039176 + Tigger1 DNA MER2_type 450 1688 -730 1353 207 28 14 chr10 70552644 70552934 -75036354 + MLT2B2 LTR ERVL 22 315 -200 745 86 0 19 chr10 70553076 70553181 -75036107 + AluSg/x SINE Alu 199 301 -11 25 90 0 0 chr10 70553420 70553487 -75035801 + AT_rich Low_complexity Low_complexity 1 67 0 325 317 68 43 chr10 70553614 70553775 -75035513 - HAL1b LINE L1 -1145 203 39 2137 114 4 0 chr10 70553834 70554145 -75035143 - AluSx SINE Alu 0 313 2 24 32 0 0 chr10 70554154 70554185 -75035103 + AT_rich Low_complexity Low_complexity 1 31 0 976 87 0 8 chr10 70554185 70554311 -75034977 - AluSg SINE Alu -185 125 1 267 326 0 0 chr10 70554766 70554858 -75034430 + T-rich Low_complexity Low_complexity 1 92 0 581 167 83 58 chr10 70555096 70555159 -75034129 - MER97b DNA MER1_type? -874 179 119 1911 140 0 50 chr10 70555159 70555481 -75033807 + AluSx SINE Alu 3 308 -4 581 167 83 58 chr10 70555481 70555573 -75033715 - MER97b DNA MER1_type? -934 119 20 322 253 12 0 chr10 70555590 70555673 -75033615 - L1ME3A LINE L1 -285 5885 5802 2191 120 56 8 chr10 70555678 70556052 -75033236 + MSTA LTR MaLR 1 392 -36 1401 180 8 8 chr10 70556054 70556328 -75032960 - AluJb SINE Alu 0 308 35 1127 108 0 6 chr10 70556486 70556643 -75032645 + AluSg/x SINE Alu 141 296 -16 4944 143 30 8 chr10 70556660 70558009 -75031279 + L1PA16 LINE L1 4785 6151 -15 2042 106 22 0 chr10 70558064 70558361 -75030927 + AluSg1 SINE Alu 1 303 0 500 342 82 58 chr10 70558549 70559146 -75030142 - L1MC4a LINE L1 -306 5860 5298 5496 68 22 9 chr10 70559323 70560086 -75029202 - LTR17 LTR ERV1 -7 773 1 1261 224 62 70 chr10 70560086 70560690 -75028598 + L1MC5 LINE L1 6890 7490 -471 1021 160 0 18 chr10 70560690 70560859 -75028429 + FRAM SINE Alu 1 166 0 7387 214 11 45 chr10 70561163 70561614 -75027674 - L1 LINE L1 -1481 6084 5619 2239 91 14 0 chr10 70561614 70561911 -75027377 + AluSq SINE Alu 1 301 -12 7387 214 11 45 chr10 70561911 70563612 -75025676 - L1 LINE L1 -1946 5619 4005 2067 116 98 5 chr10 70563742 70564149 -75025139 - L1 LINE L1 -4114 3451 3007 21 36 0 0 chr10 70564219 70564247 -75025041 + AT_rich Low_complexity Low_complexity 1 28 0 7413 41 1 1 chr10 70564247 70565677 -75023611 - L1PA5 LINE L1 -2 6152 4725 595 194 37 0 chr10 70565719 70565827 -75023461 + L1M1 LINE L1 171 282 -7283 295 206 27 0 chr10 70565830 70565903 -75023385 - L1 LINE L1 -6987 578 504 209 381 98 58 chr10 70566286 70566459 -75022829 + L2 LINE L2 3075 3254 -18 1631 187 16 29 chr10 70566466 70566599 -75022689 + AluJo SINE Alu 7 140 -172 2366 64 3 14 chr10 70566599 70566885 -75022403 + AluSp SINE Alu 6 290 -23 180 0 0 0 chr10 70566885 70566905 -75022383 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 1631 187 16 29 chr10 70566914 70567090 -75022198 + AluJo SINE Alu 140 312 0 227 192 0 0 chr10 70568090 70568142 -75021146 + (TA)n Simple_repeat Simple_repeat 1 52 0 317 204 38 29 chr10 70568665 70568758 -75020530 - MER5A DNA MER1_type -30 159 57 204 250 0 0 chr10 70568773 70568813 -75020475 + MER5C DNA MER1_type 1 40 -284 2101 136 0 3 chr10 70568896 70569191 -75020097 - AluSx SINE Alu -18 294 1 358 262 107 48 chr10 70569287 70569455 -75019833 - MIR3 SINE MIR -15 193 16 732 204 0 0 chr10 70570099 70570231 -75019057 + FLAM_A SINE Alu 2 133 0 242 194 0 32 chr10 70570404 70570466 -75018822 + (TA)n Simple_repeat Simple_repeat 1 60 0 5248 217 31 6 chr10 70571394 70572970 -75016318 - L1PA13 LINE L1 -3612 3185 1564 1652 163 7 35 chr10 70573923 70574212 -75015076 - AluJo SINE Alu -11 301 21 217 221 59 44 chr10 70574252 70574320 -75014968 + L2 LINE L2 3245 3313 0 530 263 59 13 chr10 70575495 70575647 -75013641 - MIR3 SINE MIR -8 200 42 261 266 31 78 chr10 70576236 70576364 -75012924 - L2 LINE L2 -922 2392 2271 338 200 1 0 chr10 70576447 70576516 -75012772 - AluJ/FLAM SINE Alu -239 63 2 821 164 0 0 chr10 70576613 70576735 -75012553 + FLAM_C SINE Alu 1 122 -21 272 357 36 41 chr10 70576957 70577153 -75012135 + MIR SINE MIR 16 210 -52 2253 104 3 3 chr10 70577601 70577910 -75011378 - AluSc SINE Alu 0 309 1 216 86 0 0 chr10 70577914 70577949 -75011339 + (T)n Simple_repeat Simple_repeat 1 35 0 1391 138 4 39 chr10 70578472 70578510 -75010778 + AluJb SINE Alu 85 123 -189 2252 84 0 0 chr10 70578510 70578823 -75010465 - AluSx SINE Alu 0 313 1 1391 138 4 39 chr10 70578823 70579015 -75010273 + AluJb SINE Alu 123 308 -4 736 304 12 43 chr10 70579571 70579824 -75009464 + MIR SINE MIR 18 262 0 321 276 80 9 chr10 70580015 70580202 -75009086 - L3 LINE CR1 -74 1503 1249 1896 180 91 35 chr10 70580202 70580662 -75008626 + MER66B LTR ERV1 1 486 0 303 215 130 75 chr10 70581070 70581287 -75008001 - MIR SINE MIR -44 218 1 1202 184 28 0 chr10 70581409 70581627 -75007661 + MER58A DNA MER1_type 1 224 0 2553 56 0 7 chr10 70582385 70582688 -75006600 - AluY SINE Alu -10 301 1 742 180 0 0 chr10 70583905 70584033 -75005255 + FLAM_C SINE Alu 1 128 -5 195 100 0 0 chr10 70584192 70584222 -75005066 + (CAATT)n Simple_repeat Simple_repeat 4 33 0 729 219 30 2 chr10 70584443 70584643 -75004645 + L1ME1 LINE L1 5333 5536 -626 1147 223 49 67 chr10 70584671 70585042 -75004246 + L1ME1 LINE L1 5677 6038 -128 3099 67 20 2 chr10 70585042 70585447 -75003841 - L1PA7 LINE L1 0 6154 5743 1147 223 49 67 chr10 70585447 70585569 -75003719 + L1ME1 LINE L1 6038 6161 -5 579 287 109 30 chr10 70585785 70586015 -75003273 + MIR SINE MIR 15 262 0 2124 111 7 20 chr10 70586404 70586722 -75002566 - AluSx SINE Alu 0 312 1 680 244 56 88 chr10 70587093 70587343 -75001945 - MIR SINE MIR -19 243 2 285 321 55 18 chr10 70587351 70587460 -75001828 + MIR3 SINE MIR 3 115 -93 286 304 35 92 chr10 70587628 70587888 -75001400 - MIR SINE MIR 0 262 18 323 272 93 62 chr10 70587896 70588058 -75001230 + L1ME LINE L1 5556 5722 -399 194 245 41 0 chr10 70588398 70588447 -75000841 + L2 LINE L2 3019 3069 -203 273 214 60 43 chr10 70588488 70588605 -75000683 - L1MA4 LINE L1 -55 6245 6127 197 32 0 32 chr10 70588607 70588638 -75000650 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 1912 157 3 14 chr10 70589217 70589503 -74999785 + AluJo SINE Alu 9 291 -21 662 216 47 35 chr10 70589517 70589771 -74999517 + L1MC5 LINE L1 7604 7860 -101 2525 74 0 0 chr10 70591302 70591612 -74997676 - AluY SINE Alu 0 311 2 21 0 0 0 chr10 70591907 70591928 -74997360 + GC_rich Low_complexity Low_complexity 1 21 0 195 129 0 0 chr10 70592013 70592044 -74997244 + (GGGAGA)n Simple_repeat Simple_repeat 6 36 0 22 0 0 0 chr10 70592186 70592208 -74997080 + GC_rich Low_complexity Low_complexity 1 22 0 192 152 0 0 chr10 70592208 70592241 -74997047 + A-rich Low_complexity Low_complexity 1 33 0 2031 156 0 3 chr10 70592776 70593083 -74996205 - AluJb SINE Alu -6 306 1 1749 164 39 39 chr10 70593581 70593893 -74995395 + AluJb SINE Alu 1 312 0 957 233 0 0 chr10 70594017 70594206 -74995082 + MER5A DNA MER1_type 1 189 0 192 238 286 19 chr10 70594220 70594325 -74994963 - MIR SINE MIR -108 154 22 209 253 38 38 chr10 70594430 70594509 -74994779 + MIR SINE MIR 118 196 -66 483 153 0 0 chr10 70594928 70595000 -74994288 - AluJ/FRAM SINE Alu -18 294 223 1107 135 37 10 chr10 70595124 70595363 -74993925 - MLT2D LTR ERVL -132 282 1 1877 157 10 7 chr10 70595387 70595680 -74993608 + AluJb SINE Alu 1 294 -18 26 0 0 0 chr10 70595731 70595757 -74993531 + AT_rich Low_complexity Low_complexity 1 26 0 2006 139 10 13 chr10 70595945 70596246 -74993042 + AluJb SINE Alu 1 300 -12 907 129 8 0 chr10 70599745 70599877 -74989411 + FLAM_C SINE Alu 1 133 0 2042 122 31 7 chr10 70599987 70600161 -74989127 - AluSc SINE Alu -8 301 116 255 93 0 0 chr10 70600161 70600204 -74989084 + (TTTTG)n Simple_repeat Simple_repeat 3 45 0 2042 122 31 7 chr10 70600204 70600323 -74988965 - AluSc SINE Alu -193 116 1 2397 107 0 0 chr10 70600326 70600636 -74988652 - AluSg SINE Alu 0 310 1 1349 287 49 24 chr10 70601847 70602618 -74986670 + L2 LINE L2 2504 3296 -17 921 170 50 6 chr10 70602866 70603048 -74986240 + MIR SINE MIR 49 238 -24 361 86 0 17 chr10 70603146 70603204 -74986084 + AluY SINE Alu 30 86 -214 11266 145 17 31 chr10 70603423 70603612 -74985676 - Ricksha_c DNA DNA -1208 2046 1856 2098 137 0 20 chr10 70603612 70603918 -74985370 + AluSq SINE Alu 1 300 -13 11266 145 17 31 chr10 70603918 70605794 -74983494 - Ricksha_c DNA DNA -1398 1856 10 1288 217 133 41 chr10 70605814 70606325 -74982963 - L1MA7 LINE L1 -282 6009 5452 2466 141 33 21 chr10 70606337 70606764 -74982524 - MSTB1 LTR MaLR 0 432 1 1428 179 63 55 chr10 70606992 70607355 -74981933 + MLT1B LTR MaLR 4 369 -21 1619 211 25 47 chr10 70607990 70608463 -74980825 - LTR37B LTR ERV1 0 468 6 1893 184 0 0 chr10 70609173 70609467 -74979821 + AluJb SINE Alu 1 294 -18 3844 159 40 15 chr10 70609689 70610432 -74978856 + L1MB5 LINE L1 5413 6174 0 562 210 98 24 chr10 70610732 70610898 -74978390 - MIR3 SINE MIR -7 201 21 3313 79 37 0 chr10 70611444 70611925 -74977363 - MER4E LTR ERV1 0 766 268 387 0 0 0 chr10 70613053 70613096 -74976192 + (CA)n Simple_repeat Simple_repeat 2 44 0 2399 70 0 0 chr10 70613847 70614146 -74975142 + AluSc SINE Alu 1 299 -10 21 57 0 0 chr10 70615490 70615525 -74973763 + AT_rich Low_complexity Low_complexity 1 35 0 1864 157 22 22 chr10 70616620 70616932 -74972356 + AluJo SINE Alu 1 312 0 228 146 0 0 chr10 70617328 70617369 -74971919 - Alu SINE Alu -259 41 1 214 283 33 0 chr10 70617882 70617942 -74971346 + MIR3 SINE MIR 141 202 -6 544 303 38 96 chr10 70617970 70618284 -74971004 - L2 LINE L2 -5 3267 2972 2319 100 0 3 chr10 70618373 70618672 -74970616 + AluSc SINE Alu 1 298 -11 1924 137 4 0 chr10 70620158 70620436 -74968852 - AluSx SINE Alu -9 303 25 317 223 32 75 chr10 70620819 70620913 -74968375 - MER5B DNA MER1_type -11 167 78 2237 123 0 0 chr10 70620928 70621230 -74968058 - AluSx SINE Alu -10 302 1 181 182 30 0 chr10 70621280 70621313 -74967975 - MER5B DNA MER1_type -138 40 7 1847 172 61 0 chr10 70621318 70621661 -74967627 - MLT1A1 LTR MaLR -1 364 1 24 0 0 0 chr10 70621878 70621902 -74967386 + AT_rich Low_complexity Low_complexity 1 24 0 397 302 93 14 chr10 70622117 70622256 -74967032 + MIR SINE MIR 5 154 -108 2497 103 5 36 chr10 70622256 70622304 -74966984 - THE1C LTR MaLR 0 375 327 2110 113 3 0 chr10 70622304 70622625 -74966663 - AluSx SINE Alu 0 322 1 2497 103 5 36 chr10 70622625 70622962 -74966326 - THE1C LTR MaLR -48 327 1 369 177 150 95 chr10 70624171 70624318 -74964970 - L2 LINE L2 0 3313 3159 306 0 0 0 chr10 70624534 70624568 -74964720 + (TG)n Simple_repeat Simple_repeat 2 35 0 1965 162 0 3 chr10 70625637 70625933 -74963355 + AluJo SINE Alu 1 295 -17 272 140 0 18 chr10 70626510 70626567 -74962721 + (TTCTC)n Simple_repeat Simple_repeat 1 56 0 1167 184 137 26 chr10 70626567 70626838 -74962450 - AluJo SINE Alu 0 302 2 440 235 124 12 chr10 70626841 70627019 -74962269 + MLT1J LTR MaLR 8 167 -283 962 216 18 40 chr10 70627224 70627446 -74961842 - AluJo SINE Alu -14 298 82 699 352 101 22 chr10 70627619 70628354 -74960934 - L2 LINE L2 0 3272 2470 325 269 59 34 chr10 70628544 70628663 -74960625 + L2 LINE L2 3142 3263 -9 355 318 32 19 chr10 70629684 70629838 -74959450 - MIR SINE MIR -55 207 52 921 322 67 10 chr10 70629920 70630308 -74958980 - MLT1K LTR MaLR -110 478 69 587 306 70 0 chr10 70630362 70630561 -74958727 + LTR33 LTR ERVL 1 213 -308 363 258 68 23 chr10 70630681 70630813 -74958475 + LTR33 LTR ERVL 384 521 0 701 289 152 32 chr10 70630845 70631187 -74958101 + L3 LINE CR1 1169 1551 -26 197 232 87 29 chr10 70631734 70631803 -74957485 + L3 LINE CR1 1502 1574 -3 298 241 0 0 chr10 70632184 70632242 -74957046 - L2 LINE L2 0 3272 3215 2419 94 7 0 chr10 70632283 70632592 -74956696 + AluSx SINE Alu 1 311 -1 201 333 13 47 chr10 70632597 70632747 -74956541 + L2 LINE L2 2445 2589 -725 254 329 71 7 chr10 70633200 70633340 -74955948 + L2 LINE L2 2599 2747 -567 2244 122 0 0 chr10 70633452 70633755 -74955533 - AluSx SINE Alu -9 303 1 485 226 90 13 chr10 70633764 70633919 -74955369 - L1ME4a LINE L1 -11 6110 5944 29 0 0 0 chr10 70634042 70634071 -74955217 + AT_rich Low_complexity Low_complexity 1 29 0 2390 57 7 10 chr10 70634774 70635071 -74954217 + AluY SINE Alu 1 296 -15 309 238 0 0 chr10 70635436 70635516 -74953772 + (TA)n Simple_repeat Simple_repeat 1 80 0 1690 178 3 14 chr10 70635516 70635673 -74953615 - AluJb SINE Alu -22 290 136 2292 112 3 0 chr10 70635673 70635978 -74953310 - AluSp SINE Alu -6 307 2 1690 178 3 14 chr10 70635978 70636113 -74953175 - AluJb SINE Alu -176 136 1 21 0 0 0 chr10 70636640 70636661 -74952627 + AT_rich Low_complexity Low_complexity 1 21 0 318 26 0 0 chr10 70637135 70637174 -74952114 + (TTCC)n Simple_repeat Simple_repeat 2 40 0 725 174 61 0 chr10 70637332 70637464 -74951824 - AluJo SINE Alu -171 141 2 1112 257 116 47 chr10 70637564 70638203 -74951085 - L1ME4a LINE L1 -57 6064 5382 3884 186 122 3 chr10 70638287 70639025 -74950263 - LTR1B LTR ERV1 0 826 1 1405 217 49 41 chr10 70639072 70639417 -74949871 + LTR16C LTR ERVL 144 491 0 568 271 112 54 chr10 70640969 70641320 -74947968 - MLT1I LTR MaLR -2 407 38 452 275 16 85 chr10 70641676 70641805 -74947483 + MER5A DNA MER1_type 7 121 -68 2293 83 0 3 chr10 70641805 70642094 -74947194 - AluSg1 SINE Alu -21 288 1 452 275 16 85 chr10 70642094 70642153 -74947135 + MER5A DNA MER1_type 121 182 -7 1543 186 3 18 chr10 70643115 70643400 -74945888 + AluJo SINE Alu 2 282 -30 1515 108 5 0 chr10 70644446 70644650 -74944638 + AluSp SINE Alu 104 308 -5 3772 103 0 6 chr10 70644677 70645192 -74944096 + L1PB1 LINE L1 5638 6149 -2 1921 157 0 13 chr10 70646408 70646707 -74942581 + AluJo SINE Alu 1 295 -17 2010 212 78 16 chr10 70647104 70647603 -74941685 + MLT1F LTR MaLR 13 542 0 1978 88 57 11 chr10 70648375 70648658 -74940630 - AluSg1 SINE Alu -13 296 1 269 185 111 25 chr10 70648660 70648741 -74940547 - MIR SINE MIR -70 192 105 285 356 62 18 chr10 70648876 70649065 -74940223 + MIR3 SINE MIR 8 201 -44 181 310 17 0 chr10 70649082 70649140 -74940148 + MIR SINE MIR 84 142 -120 746 270 86 59 chr10 70649202 70649610 -74939678 + LTR16A LTR ERVL 25 443 -7 2448 77 0 13 chr10 70650008 70650321 -74938967 + AluSp SINE Alu 1 309 -4 258 32 0 0 chr10 70650342 70650373 -74938915 + (CA)n Simple_repeat Simple_repeat 2 32 0 799 147 18 94 chr10 70650391 70650448 -74938840 + L1MA9 LINE L1 5780 5840 -472 2177 99 0 3 chr10 70650448 70650731 -74938557 + AluSx SINE Alu 9 290 -22 799 147 18 94 chr10 70650731 70650843 -74938445 + L1MA9 LINE L1 5840 5936 -376 2230 107 3 0 chr10 70651033 70651323 -74937965 + AluSp SINE Alu 1 291 -22 523 234 0 143 chr10 70651386 70651464 -74937824 - MER102b DNA MER1_type -1087 341 253 1159 228 104 19 chr10 70651464 70651780 -74937508 - MER2 DNA MER2_type -1 343 1 523 234 0 143 chr10 70651780 70651910 -74937378 - MER102b DNA MER1_type -1175 253 163 2327 88 0 13 chr10 70651921 70652229 -74937059 - AluSx SINE Alu -8 304 1 233 250 66 13 chr10 70653717 70653793 -74935495 - MLT1K LTR MaLR 0 588 509 411 308 19 0 chr10 70654213 70654320 -74934968 - MER5A DNA MER1_type -77 112 4 268 309 40 60 chr10 70654330 70654479 -74934809 + MLT1K LTR MaLR 8 153 -435 310 258 0 0 chr10 70654522 70654584 -74934704 + L2 LINE L2 3248 3309 -4 1893 155 0 0 chr10 70654620 70654927 -74934361 + AluJb SINE Alu 1 307 0 446 289 74 66 chr10 70655041 70655091 -74934197 + MLT1L LTR MaLR 370 418 -197 2320 92 0 3 chr10 70655091 70655394 -74933894 + AluSg1 SINE Alu 1 302 -7 2373 89 3 9 chr10 70655402 70655717 -74933571 + AluSq SINE Alu 1 313 0 446 289 74 66 chr10 70655717 70655899 -74933389 + MLT1L LTR MaLR 424 613 -2 210 326 29 117 chr10 70656604 70657024 -74932264 + L2 LINE L2 2811 3193 -79 288 0 0 0 chr10 70658781 70658813 -74930475 + (TG)n Simple_repeat Simple_repeat 2 33 0 2210 122 0 10 chr10 70659478 70659789 -74929499 + AluSx SINE Alu 1 308 -4 249 262 119 71 chr10 70659918 70660044 -74929244 + MIR3 SINE MIR 38 169 -39 269 281 21 31 chr10 70660238 70660334 -74928954 + HAL1 LINE L1 28 122 -2385 1160 271 33 71 chr10 70660450 70660658 -74928630 + HAL1 LINE L1 131 345 -2162 2166 106 3 3 chr10 70660658 70660950 -74928338 + AluSx SINE Alu 3 294 -18 1160 271 33 71 chr10 70660950 70660966 -74928322 + HAL1 LINE L1 345 360 -2147 1578 182 55 7 chr10 70660966 70661080 -74928208 + AluJb SINE Alu 6 113 -199 360 0 0 0 chr10 70661080 70661120 -74928168 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 1578 182 55 7 chr10 70661120 70661296 -74927992 + AluJb SINE Alu 113 310 -2 1160 271 33 71 chr10 70661296 70661580 -74927708 + HAL1 LINE L1 360 621 -1886 552 206 62 14 chr10 70661590 70661736 -74927552 + HAL1 LINE L1 1725 1877 -630 1159 292 56 26 chr10 70662138 70662771 -74926517 - L1ME3A LINE L1 -261 5917 5264 239 280 21 0 chr10 70662885 70662978 -74926310 - L1ME2 LINE L1 0 6164 6070 706 196 18 0 chr10 70663001 70663142 -74926146 - FLAM_A SINE Alu 0 143 1 295 255 119 82 chr10 70663142 70663530 -74925758 - L1ME3A LINE L1 -966 5180 4779 1414 189 55 101 chr10 70663670 70664152 -74925136 - MER39 LTR ERV1 -25 682 6 463 257 62 7 chr10 70664341 70664485 -74924803 + MIR3 SINE MIR 55 206 -2 2333 95 0 7 chr10 70664918 70665223 -74924065 + AluSg SINE Alu 1 303 -7 24 0 0 0 chr10 70665337 70665361 -74923927 + AT_rich Low_complexity Low_complexity 1 24 0 335 228 76 11 chr10 70665402 70665494 -74923794 - MIR3 SINE MIR -21 187 90 391 180 41 128 chr10 70665601 70665735 -74923553 - MER69 DNA AcHobo -1 2525 2408 2287 107 3 3 chr10 70665735 70666044 -74923244 + AluSx SINE Alu 1 309 -3 391 180 41 128 chr10 70666044 70666081 -74923207 - MER69 DNA AcHobo -118 2408 2369 259 62 0 0 chr10 70666214 70666246 -74923042 - MER69 DNA AcHobo -2494 32 1 234 242 32 0 chr10 70666469 70666531 -74922757 - MIR SINE MIR -121 141 78 216 0 0 0 chr10 70667196 70667220 -74922068 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 300 311 47 16 chr10 70667306 70667496 -74921792 + L1ME2 LINE L1 5749 5944 -220 269 159 16 0 chr10 70667705 70667768 -74921520 + CT-rich Low_complexity Low_complexity 1 64 0 465 90 0 0 chr10 70668227 70668294 -74920994 + (TC)n Simple_repeat Simple_repeat 2 68 0 294 29 0 0 chr10 70668295 70668330 -74920958 + (CA)n Simple_repeat Simple_repeat 2 36 0 12358 78 3 0 chr10 70668712 70670258 -74919030 + THE1B-int LTR MaLR 31 1580 0 2527 129 5 27 chr10 70670258 70670630 -74918658 + THE1B LTR MaLR 1 364 0 530 273 8 0 chr10 70670976 70671097 -74918191 + MIR SINE MIR 2 123 -139 2194 116 3 0 chr10 70671104 70671398 -74917890 - AluSx SINE Alu -17 295 1 1818 157 0 18 chr10 70671673 70671983 -74917305 - AluSx SINE Alu 0 305 1 2134 120 0 0 chr10 70672598 70672898 -74916390 + AluSx SINE Alu 1 300 -12 400 300 31 31 chr10 70673079 70673209 -74916079 - MIR3 SINE MIR -1 207 78 676 299 68 35 chr10 70673469 70673837 -74915451 - MLT1K LTR MaLR -57 531 152 1030 217 16 16 chr10 70673902 70674146 -74915142 - MIR SINE MIR -5 257 14 346 343 39 44 chr10 70675532 70675713 -74913575 + MIR3 SINE MIR 4 183 -25 211 250 0 0 chr10 70675803 70675847 -74913441 - MIR SINE MIR -113 149 106 487 276 80 25 chr10 70676229 70676392 -74912896 + MIR3 SINE MIR 19 190 -18 466 160 0 0 chr10 70676832 70676907 -74912381 + AluJ/FRAM SINE Alu 230 304 -8 1687 235 71 60 chr10 70677371 70677509 -74911779 + MLT1F LTR MaLR 1 136 -406 1733 129 38 4 chr10 70677509 70677794 -74911494 - AluJb SINE Alu 0 312 17 1687 235 71 60 chr10 70677794 70678191 -74911097 + MLT1F LTR MaLR 136 542 0 457 246 251 0 chr10 70680456 70680671 -74908617 + L1ME4a LINE L1 5849 6117 -4 255 224 101 18 chr10 70681172 70681393 -74907895 + L1ME3A LINE L1 5674 5946 -224 421 302 58 6 chr10 70681612 70681784 -74907504 - MIR SINE MIR -15 247 67 1845 93 41 33 chr10 70681971 70682241 -74907047 + L1PA11 LINE L1 5903 6174 0 226 293 243 21 chr10 70682822 70682962 -74906326 + MIR3 SINE MIR 33 203 -5 821 80 35 0 chr10 70683645 70683758 -74905530 + AluSg/x SINE Alu 177 293 -17 207 147 27 0 chr10 70683770 70683812 -74905476 - MIR SINE MIR -64 144 100 6006 121 52 91 chr10 70684279 70684588 -74904700 - Tigger3b DNA MER2_type -1825 1203 884 2333 97 0 0 chr10 70684588 70684878 -74904410 + AluSg SINE Alu 1 290 -20 6006 121 52 91 chr10 70684878 70685457 -74903831 - Tigger3b DNA MER2_type -2144 884 374 2186 111 0 10 chr10 70685457 70685754 -74903534 + AluSx SINE Alu 1 294 -18 6006 121 52 91 chr10 70685754 70686113 -74903175 - Tigger3b DNA MER2_type -2654 374 3 1162 123 70 11 chr10 70686113 70686298 -74902990 + Tigger3(Golem) DNA MER2_type 2152 2347 -682 1463 267 34 18 chr10 70686338 70686844 -74902444 - Charlie7 DNA MER1_type -260 2352 1839 8882 142 19 19 chr10 70686857 70689398 -74899890 - L1MA2 LINE L1 0 6304 3767 1429 201 0 43 chr10 70689936 70690239 -74899049 - L1PA15-16 LINE L1 -6116 733 444 992 313 35 6 chr10 70690709 70691048 -74898240 - L1M2 LINE L1 -6399 450 102 499 240 29 10 chr10 70691054 70691158 -74898130 - MLT1A1 LTR MaLR -80 285 180 305 115 17 23 chr10 70691273 70691347 -74897941 + L1M3 LINE L1 5449 5521 -782 197 0 71 0 chr10 70691363 70691391 -74897897 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 2197 111 3 0 chr10 70691449 70691756 -74897532 - AluSx SINE Alu -4 308 1 1848 162 14 3 chr10 70692678 70692974 -74896314 - AluJo SINE Alu -13 299 1 1064 177 101 5 chr10 70693005 70693118 -74896170 + AluJo SINE Alu 1 102 -210 441 0 0 0 chr10 70693118 70693167 -74896121 + (CA)n Simple_repeat Simple_repeat 2 50 0 1064 177 101 5 chr10 70693167 70693262 -74896026 + AluJo SINE Alu 102 229 -83 1593 233 110 30 chr10 70693557 70694059 -74895229 + MLT1F LTR MaLR 1 542 0 271 318 15 0 chr10 70694907 70694973 -74894315 + MIR SINE MIR 4 70 -192 782 268 82 60 chr10 70696177 70696674 -74892614 - MLT1J LTR MaLR -1 510 3 1537 171 0 82 chr10 70696862 70697178 -74892110 + AluJb SINE Alu 1 290 -22 492 263 80 80 chr10 70697438 70697777 -74891511 + MLT1I LTR MaLR 71 409 0 1465 230 43 41 chr10 70698062 70698501 -74890787 - MER39 LTR ERV1 -9 698 259 283 183 323 11 chr10 70698477 70698570 -74890718 - MER34 LTR ERV1 -420 122 1 * 1921 80 0 0 chr10 70698991 70699257 -74890031 - AluY SINE Alu 0 307 42 1786 157 11 0 chr10 70699409 70699719 -74889569 + AluJo SINE Alu 1 313 0 620 137 0 57 chr10 70699749 70699873 -74889415 - MER51C LTR ERV1 -2 638 522 466 232 120 77 chr10 70699872 70700131 -74889157 - MER51A LTR ERV1 -37 597 328 * 260 202 32 128 chr10 70700860 70700925 -74888363 - MIR SINE MIR -54 208 153 2383 86 0 13 chr10 70700925 70701239 -74888049 - AluSq SINE Alu -3 310 1 260 202 32 128 chr10 70701239 70701267 -74888021 - MIR SINE MIR -109 153 124 2091 121 95 20 chr10 70701941 70702288 -74887000 + THE1C LTR MaLR 1 373 -2 701 161 110 0 chr10 70702658 70702776 -74886512 - FLAM_C SINE Alu 0 133 3 567 223 137 29 chr10 70702942 70703117 -74886171 - MIR SINE MIR -5 257 64 1902 121 37 0 chr10 70703210 70703515 -74885773 + AluSx SINE Alu 1 315 0 8007 29 9 0 chr10 70703706 70704981 -74884307 - L1PA4 LINE L1 -2 6153 4873 265 247 12 25 chr10 70704981 70705062 -74884226 + MER58B DNA MER1_type 77 156 -185 9808 182 26 8 chr10 70705068 70705623 -74883665 - L1PA16 LINE L1 -2 6164 5621 1760 199 3 3 chr10 70705623 70705934 -74883354 - AluJo SINE Alu -1 311 1 9808 182 26 8 chr10 70705934 70706048 -74883240 - L1PA16 LINE L1 -545 5621 5511 2307 98 0 3 chr10 70706048 70706344 -74882944 - AluSg1 SINE Alu -11 298 4 9808 182 26 8 chr10 70706344 70707209 -74882079 - L1PA16 LINE L1 -655 5511 4663 1856 149 48 7 chr10 70707209 70707504 -74881784 + AluSx SINE Alu 1 307 -5 9808 182 26 8 chr10 70707504 70708935 -74880353 - L1PA16 LINE L1 -1503 4663 3140 979 198 34 0 chr10 70708944 70709121 -74880167 + MER58B DNA MER1_type 159 341 0 2192 92 3 20 chr10 70709935 70710239 -74879049 + AluSq SINE Alu 1 299 -14 246 167 21 0 chr10 70710239 70710287 -74879001 + L1MA8 LINE L1 6025 6073 -218 986 185 13 26 chr10 70711539 70711771 -74877517 + L1MA8 LINE L1 6060 6288 -3 4714 166 36 13 chr10 70712451 70713334 -74875954 - L1MB4 LINE L1 -6 6174 5267 2416 80 0 3 chr10 70713334 70713635 -74875653 - AluY SINE Alu -11 300 1 4714 166 36 13 chr10 70713635 70713707 -74875581 - L1MB4 LINE L1 -913 5267 5198 559 98 0 0 chr10 70713710 70713792 -74875496 - FAM SINE Alu -3 182 101 * 668 290 0 0 chr10 70713791 70713922 -74875366 - FAM SINE Alu -54 131 1 233 241 36 12 chr10 70713935 70714018 -74875270 - L1MB4 LINE L1 -952 5194 5110 693 294 108 0 chr10 70714372 70714576 -74874712 + MIR SINE MIR 27 252 -10 254 213 0 0 chr10 70714581 70714628 -74874660 + MIR SINE MIR 179 225 -37 309 275 55 37 chr10 70714650 70714759 -74874529 - Charlie8 DNA MER1_type -2300 117 7 192 77 0 0 chr10 70714862 70714888 -74874400 + (TCC)n Simple_repeat Simple_repeat 2 27 0 1375 127 33 0 chr10 70715037 70715272 -74874016 + AluSg/x SINE Alu 65 306 0 289 320 74 65 chr10 70715537 70715862 -74873426 - MLT1K LTR MaLR -114 474 147 1245 186 0 62 chr10 70715958 70716237 -74873051 + AluJb SINE Alu 41 303 0 602 160 19 0 chr10 70716383 70716489 -74872799 - AluSg/x SINE Alu 0 309 202 3052 61 2 23 chr10 70716494 70716889 -74872399 - L1PA5 LINE L1 0 6154 5768 3627 123 24 4 chr10 70716940 70717451 -74871837 + MER1A DNA MER1_type 3 523 -6 512 242 56 19 chr10 70717786 70717947 -74871341 - HAL1b LINE L1 0 6121 1193 2225 113 0 3 chr10 70718025 70718327 -74870961 + AluSx SINE Alu 1 301 -11 2932 102 3 0 chr10 70719081 70719454 -74869834 + THE1C LTR MaLR 2 375 0 240 185 94 14 chr10 70719512 70719582 -74869706 + MIR SINE MIR 56 131 -77 328 148 0 0 chr10 70719889 70719943 -74869345 + MIR SINE MIR 204 257 -5 1369 155 5 5 chr10 70721302 70721515 -74867773 + AluJb SINE Alu 1 213 -99 300 296 138 21 chr10 70721704 70721893 -74867395 + MIR SINE MIR 12 222 -40 1206 116 22 0 chr10 70722031 70722212 -74867076 + MER53 DNA DNA 5 189 0 458 139 0 0 chr10 70722218 70722290 -74866998 + MIR SINE MIR 73 144 -118 1466 200 154 6 chr10 70722986 70723331 -74865957 - MSTD LTR MaLR 0 396 1 2679 36 3 0 chr10 70723960 70724266 -74865022 + AluY SINE Alu 1 307 -4 241 217 155 62 chr10 70724314 70724443 -74864845 + LTR33 LTR ERVL 19 159 -362 394 259 54 0 chr10 70724558 70724670 -74864618 + LTR33 LTR ERVL 347 464 -57 28 0 0 0 chr10 70725090 70725118 -74864170 + AT_rich Low_complexity Low_complexity 1 28 0 7194 40 18 9 chr10 70725118 70726010 -74863278 - L1PA7 LINE L1 -1 6153 5254 550 185 126 143 chr10 70726062 70726490 -74862798 + Charlie7 DNA MER1_type 1429 1849 -763 999 150 58 19 chr10 70726490 70726697 -74862591 + L1M1 LINE L1 19 233 -7332 677 348 106 9 chr10 70826759 70826893 -74762395 - L2 LINE L2 -2 3311 3191 4552 151 31 37 chr10 70826893 70827607 -74761681 + MER6 DNA MER2_type 1 711 -154 2004 142 3 0 chr10 70827607 70827910 -74761378 + AluSx SINE Alu 1 304 -8 4552 151 31 37 chr10 70827910 70828065 -74761223 + MER6 DNA MER2_type 711 865 0 677 348 106 9 chr10 70828065 70828373 -74760915 - L2 LINE L2 -122 3191 2826 1275 249 18 80 chr10 70828384 70828855 -74760433 + MLT2B1 LTR ERVL 5 439 -81 330 26 0 0 chr10 70828855 70828894 -74760394 + (CA)n Simple_repeat Simple_repeat 2 40 0 1275 249 18 80 chr10 70828894 70828972 -74760316 + MLT2B1 LTR ERVL 439 520 0 1140 293 46 24 chr10 70828974 70829435 -74759853 - L2 LINE L2 -580 2734 2264 1959 174 22 54 chr10 70829809 70830218 -74759070 + MSTD LTR MaLR 1 396 0 271 336 63 21 chr10 70830718 70830861 -74758427 + MIR3 SINE MIR 59 207 -1 357 24 0 0 chr10 70830874 70830916 -74758372 + (TG)n Simple_repeat Simple_repeat 2 43 0 197 314 22 51 chr10 70831687 70831824 -74757464 - MIR3 SINE MIR 0 208 76 212 292 28 0 chr10 70831825 70831897 -74757391 - MIR SINE MIR -103 105 32 273 300 58 50 chr10 70831971 70832091 -74757197 + L2 LINE L2 3171 3291 -22 2004 157 33 30 chr10 70832500 70832863 -74756425 + THE1B LTR MaLR 1 364 0 2142 110 0 31 chr10 70833749 70834066 -74755222 + AluSq SINE Alu 1 307 -6 218 235 101 67 chr10 70834102 70834145 -74755143 - L2 LINE L2 -46 3267 3227 2163 118 7 0 chr10 70834145 70834442 -74754846 + AluSx SINE Alu 1 299 -13 218 235 101 67 chr10 70834442 70834577 -74754711 - L2 LINE L2 -86 3227 3083 350 294 85 13 chr10 70834693 70834846 -74754442 - Charlie8 DNA MER1_type -2206 211 48 1652 140 64 0 chr10 70834984 70835249 -74754039 + AluSg SINE Alu 1 282 -28 29 0 0 0 chr10 70835252 70835281 -74754007 + AT_rich Low_complexity Low_complexity 1 29 0 237 139 0 0 chr10 70836745 70836788 -74752500 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 2402 81 0 10 chr10 70836951 70837261 -74752027 + AluSp SINE Alu 1 307 -6 374 328 103 6 chr10 70837869 70838043 -74751245 - MIR SINE MIR -52 210 20 2108 130 0 0 chr10 70838062 70838370 -74750918 + AluSx SINE Alu 2 309 0 5410 123 9 30 chr10 70838370 70839256 -74750032 - L1PA16 LINE L1 -10 6156 5290 1270 226 0 3 chr10 70839257 70839544 -74749744 + L1P LINE L1 4814 5099 -1047 654 296 77 27 chr10 70839653 70839950 -74749338 - LTR16B LTR ERVL -103 361 50 227 209 209 61 chr10 70840510 70840625 -74748663 - L2 LINE L2 -2 3311 3180 23 0 0 0 chr10 70841064 70841087 -74748201 + AT_rich Low_complexity Low_complexity 1 23 0 518 275 99 20 chr10 70844628 70844861 -74744427 - MIR SINE MIR -6 256 8 205 325 76 86 chr10 70845420 70845829 -74743459 - L2 LINE L2 -353 2961 2557 266 293 55 19 chr10 70846011 70846190 -74743098 + MLT1J2 LTR MaLR 273 409 0 685 179 75 52 chr10 70848581 70848754 -74740534 + MER5B DNA MER1_type 2 178 0 441 305 52 0 chr10 70849204 70849358 -74739930 - MIR SINE MIR -43 219 58 2262 126 96 30 chr10 70849536 70849941 -74739347 - MSTB1 LTR MaLR 0 432 1 2195 206 149 0 chr10 70849941 70850432 -74738856 + MLT1F1 LTR MaLR 4 567 0 298 333 16 16 chr10 70853437 70853563 -74735725 - L2 LINE L2 -322 2991 2866 1771 221 85 37 chr10 70853581 70854171 -74735117 + MLT1E2 LTR MaLR 1 538 -4 5653 133 30 11 chr10 70854297 70855228 -74734060 + L1MC1 LINE L1 5385 6333 0 1096 324 76 67 chr10 70855234 70855465 -74733823 - L2 LINE L2 -711 2603 2375 2363 93 0 0 chr10 70855465 70855765 -74733523 - AluSx SINE Alu -12 300 1 1096 324 76 67 chr10 70855765 70856602 -74732686 - L2 LINE L2 -939 2375 1526 262 296 102 11 chr10 70857588 70857676 -74731612 + MIR SINE MIR 20 115 -93 187 296 37 56 chr10 70859824 70859932 -74729356 - MIR SINE MIR -79 183 78 28 0 0 0 chr10 70860657 70860685 -74728603 + AT_rich Low_complexity Low_complexity 1 28 0 186 118 0 0 chr10 70860717 70860751 -74728537 + (A)n Simple_repeat Simple_repeat 1 34 0 199 330 187 0 chr10 70860921 70861012 -74728276 + MIR SINE MIR 34 141 -67 22 35 0 0 chr10 70861131 70861160 -74728128 + AT_rich Low_complexity Low_complexity 1 29 0 618 288 83 15 chr10 70861236 70861441 -74727847 + MIR SINE MIR 4 222 -40 2003 106 0 63 chr10 70861470 70861803 -74727485 + AluSp SINE Alu 1 314 0 235 328 116 43 chr10 70862359 70862756 -74726532 + L2 LINE L2 2847 3272 0 357 297 193 10 chr10 70862813 70863015 -74726273 + L1MC4a LINE L1 5814 6052 -1756 21 100 0 0 chr10 70863094 70863164 -74726124 + AT_rich Low_complexity Low_complexity 1 70 0 633 252 117 88 chr10 70863480 70864010 -74725278 + L1MC5 LINE L1 6642 7141 -820 * 3022 182 39 25 chr10 70864002 70864152 -74725136 + L1MB1 LINE L1 4629 4775 -1559 203 88 29 0 chr10 70864152 70864186 -74725102 + (CAAA)n Simple_repeat Simple_repeat 3 37 0 3022 182 39 25 chr10 70864186 70865062 -74724226 + L1MB1 LINE L1 4775 5671 -663 36580 94 9 8 chr10 70865070 70871194 -74718094 + L1PA6 LINE L1 11 6141 -13 2399 156 81 8 chr10 70871198 70871679 -74717609 + L1MB1 LINE L1 5653 6168 0 664 225 60 18 chr10 70871696 70872162 -74717126 + L1MC5 LINE L1 7119 7415 -393 195 69 0 0 chr10 70872317 70872346 -74716942 + (TG)n Simple_repeat Simple_repeat 1 29 0 523 232 70 79 chr10 70872363 70872678 -74716610 + L1MC5 LINE L1 7623 7934 -27 24 32 0 0 chr10 70874349 70874380 -74714908 + AT_rich Low_complexity Low_complexity 1 31 0 232 359 78 0 chr10 70874513 70874616 -74714672 + L2 LINE L2 3173 3283 -30 1961 126 22 0 chr10 70874907 70875217 -74714071 + AluSp SINE Alu 1 316 0 226 284 114 62 chr10 70875550 70875726 -74713562 - L2 LINE L2 -9 3304 3120 340 331 46 0 chr10 70877265 70877395 -74711893 + MIR3 SINE MIR 40 175 -33 2717 32 0 0 chr10 70878632 70878943 -74710345 + AluY SINE Alu 1 311 0 634 304 108 54 chr10 70879426 70879802 -74709486 + HAL1 LINE L1 375 729 -1778 1961 87 0 0 chr10 70879802 70880054 -74709234 - AluY SINE Alu -9 302 51 634 304 108 54 chr10 70880054 70880361 -74708927 + HAL1 LINE L1 729 1095 -1412 659 200 160 0 chr10 70880374 70880524 -74708764 - MER58A DNA MER1_type -2 222 49 1631 255 82 12 chr10 70880664 70881264 -74708024 + HAL1 LINE L1 1152 1793 -714 299 130 19 0 chr10 70881371 70881425 -74707863 + (TA)n Simple_repeat Simple_repeat 2 56 0 2155 112 0 7 chr10 70881427 70881721 -74707567 - AluSc SINE Alu -15 294 3 327 289 178 21 chr10 70881806 70882048 -74707240 + HAL1 LINE L1 2025 2304 -203 305 182 148 57 chr10 70882424 70882512 -74706776 + MER21B LTR ERV1 710 805 -58 613 227 184 35 chr10 70882622 70882878 -74706410 + L2 LINE L2 3020 3313 0 2350 93 0 0 chr10 70884528 70884830 -74704458 + AluY SINE Alu 1 302 -9 230 191 118 145 chr10 70884835 70884987 -74704301 + L1MC5 LINE L1 7754 7901 -60 278 230 81 0 chr10 70885931 70886005 -74703283 - MIR SINE MIR -77 185 106 22 0 0 0 chr10 70886264 70886286 -74703002 + AT_rich Low_complexity Low_complexity 1 22 0 799 261 88 27 chr10 70886368 70886663 -74702625 + L2 LINE L2 2333 2645 -669 1079 241 34 64 chr10 70886674 70887045 -74702243 - MLT1A1 LTR MaLR -2 363 1 1093 276 117 24 chr10 70887045 70887608 -74701680 + L2 LINE L2 2691 3312 -1 1571 119 23 0 chr10 70888490 70888750 -74700538 - L1MA2 LINE L1 0 6304 6039 387 333 36 0 chr10 70889552 70889663 -74699625 - L2 LINE L2 -9 3304 3190 227 313 104 15 chr10 70889748 70889882 -74699406 + MER5A DNA MER1_type 44 189 0 825 254 71 13 chr10 70890405 70890629 -74698659 - MIR SINE MIR -24 238 2 624 286 77 13 chr10 70890791 70891025 -74698263 + MIR SINE MIR 1 249 -13 23 54 0 0 chr10 70892486 70892523 -74696765 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr10 70896865 70896886 -74692402 + AT_rich Low_complexity Low_complexity 1 21 0 263 380 72 12 chr10 70898562 70898728 -74690560 + MIR SINE MIR 15 190 -72 22 0 0 0 chr10 70901301 70901323 -74687965 + AT_rich Low_complexity Low_complexity 1 22 0 229 174 130 0 chr10 70901485 70901531 -74687757 - L3 LINE CR1 -204 1373 1322 300 179 19 113 chr10 70902138 70902244 -74687044 - L1MDa LINE L1 -4036 2504 2409 245 303 198 6 chr10 70902844 70903006 -74686282 + MIR SINE MIR 20 212 -50 217 324 0 14 chr10 70903036 70903110 -74686178 + MIR SINE MIR 163 235 -27 184 321 114 22 chr10 70903347 70903531 -74685757 + L2 LINE L2 2839 3039 -233 2183 165 43 17 chr10 70903922 70904341 -74684947 - Tigger2a DNA MER2_type -1 433 4 1276 164 108 34 chr10 70905888 70906156 -74683132 + AluJo SINE Alu 1 288 -24 297 194 46 0 chr10 70907723 70907806 -74681482 + MIR SINE MIR 117 203 -59 261 0 0 0 chr10 70908223 70908252 -74681036 + (TC)n Simple_repeat Simple_repeat 2 30 0 * 306 106 0 0 chr10 70908251 70908298 -74680990 + (TG)n Simple_repeat Simple_repeat 2 48 0 238 263 18 0 chr10 70908298 70908355 -74680933 + CT-rich Low_complexity Low_complexity 2 59 0 235 200 46 15 chr10 70908906 70908971 -74680317 + MIR SINE MIR 131 197 -65 14962 127 9 38 chr10 70909377 70911868 -74677420 - Tigger1 DNA MER2_type 0 2418 1 1210 223 46 21 chr10 70912066 70912394 -74676894 - L1ME3A LINE L1 -8 6162 5827 219 222 0 0 chr10 70913178 70913223 -74676065 + CT-rich Low_complexity Low_complexity 1 45 0 1998 153 20 14 chr10 70913496 70913842 -74675446 - MER7A DNA MER2_type 0 346 1 2343 83 0 7 chr10 70914950 70915252 -74674036 + AluSp SINE Alu 3 302 -11 31 0 0 0 chr10 70916250 70916281 -74673007 + AT_rich Low_complexity Low_complexity 1 31 0 270 0 0 0 chr10 70916763 70916793 -74672495 + (CA)n Simple_repeat Simple_repeat 2 31 0 2201 99 17 10 chr10 70916797 70917090 -74672198 - AluSx SINE Alu -17 295 1 703 281 75 13 chr10 70917094 70917322 -74671966 - MIR SINE MIR -7 255 14 610 321 54 0 chr10 70919492 70919716 -74669572 + MIR SINE MIR 27 262 0 23 0 0 0 chr10 70919814 70919837 -74669451 + AT_rich Low_complexity Low_complexity 1 23 0 220 200 0 0 chr10 70920121 70920161 -74669127 - MER91 DNA MER1_type 0 140 101 214 348 22 34 chr10 70920506 70920595 -74668693 + MIR3 SINE MIR 11 98 -110 191 230 95 40 chr10 70920961 70921035 -74668253 + L2 LINE L2 2179 2256 -1058 * 389 336 67 18 chr10 70920989 70921212 -74668076 - MIR SINE MIR 0 262 29 286 281 0 0 chr10 70921229 70921293 -74667995 + L2 LINE L2 3205 3268 -4 325 329 142 52 chr10 70921751 70921906 -74667382 + MER91A DNA MER1_type 28 196 0 212 238 0 79 chr10 70921919 70921982 -74667306 + MER5A DNA MER1_type 132 189 0 362 242 0 42 chr10 70923045 70923140 -74666148 - L1MC4 LINE L1 -1338 6704 6614 548 291 44 0 chr10 70923261 70923443 -74665845 - LTR33 LTR ERVL 0 521 332 524 284 73 35 chr10 70923496 70923728 -74665560 - LTR33 LTR ERVL -280 241 1 191 380 53 26 chr10 70923732 70923845 -74665443 + MIR3 SINE MIR 82 197 -11 234 0 0 0 chr10 70923983 70924009 -74665279 + (A)n Simple_repeat Simple_repeat 1 26 0 412 347 80 6 chr10 70925145 70925321 -74663967 + MIR3 SINE MIR 15 203 -5 869 250 54 13 chr10 70926584 70926900 -74662388 - Charlie4a DNA MER1_type -4 504 176 2605 259 88 64 chr10 70926905 70928074 -74661214 + L2 LINE L2 1794 3046 -267 2288 103 0 10 chr10 70928074 70928385 -74660903 - AluSc SINE Alu -1 308 1 2605 259 88 64 chr10 70928385 70928660 -74660628 + L2 LINE L2 3046 3313 0 373 308 31 23 chr10 70928917 70929060 -74660228 + MIR SINE MIR 20 163 -45 2132 105 0 30 chr10 70929520 70929824 -74659464 - AluSc SINE Alu -14 295 1 2366 101 0 0 chr10 70930929 70931236 -74658052 + AluSc SINE Alu 1 307 -2 351 299 0 0 chr10 70931723 70931820 -74657468 + MIR SINE MIR 90 186 -76 290 261 23 0 chr10 70933008 70933096 -74656192 + L1MC4 LINE L1 6614 6703 -1339 29 28 0 0 chr10 70934002 70934038 -74655250 + AT_rich Low_complexity Low_complexity 1 36 0 284 288 14 0 chr10 70934248 70934321 -74654967 + L2 LINE L2 3240 3313 0 2078 127 0 0 chr10 70934409 70934717 -74654571 + AluSx SINE Alu 1 308 0 716 286 153 21 chr10 70934777 70935308 -74653980 - L1ME4a LINE L1 0 6121 5521 2374 79 0 3 chr10 70936820 70937112 -74652176 + AluSg SINE Alu 1 291 -19 271 298 220 12 chr10 70937154 70937322 -74651966 + MIR SINE MIR 48 250 -12 661 187 8 8 chr10 70938005 70938128 -74651160 - FLAM_A SINE Alu -10 123 1 1639 104 0 5 chr10 70938375 70938597 -74650691 - AluSg/x SINE Alu -2 308 88 263 91 0 0 chr10 70938762 70938795 -74650493 + U2 snRNA snRNA 1 33 -155 22 0 0 0 chr10 70939234 70939256 -74650032 + AT_rich Low_complexity Low_complexity 1 22 0 1981 118 11 3 chr10 70939309 70939596 -74649692 - AluSg SINE Alu -21 289 1 395 235 54 13 chr10 70939603 70939618 -74649670 - L1MA10 LINE L1 -2 6332 6318 1042 218 42 24 chr10 70939618 70939907 -74649381 - L1ME2 LINE L1 -9 6155 5862 2097 216 24 38 chr10 70939997 70940570 -74648718 - L1ME2 LINE L1 -331 5833 5269 397 324 84 90 chr10 70941725 70942068 -74647220 - L2 LINE L2 -2 3270 2930 192 77 0 0 chr10 70942520 70942546 -74646742 + (TTTTTG)n Simple_repeat Simple_repeat 6 31 0 2263 96 3 0 chr10 70942831 70943123 -74646165 + AluSc SINE Alu 1 293 -16 267 152 0 0 chr10 70943721 70943767 -74645521 + (CA)n Simple_repeat Simple_repeat 1 46 0 965 75 11 145 chr10 70943809 70943918 -74645370 + L1MB1 LINE L1 6001 6076 -113 2333 107 0 3 chr10 70943918 70944228 -74645060 + AluSx SINE Alu 1 309 -3 965 75 11 145 chr10 70944228 70944304 -74644984 + L1MB1 LINE L1 6076 6161 -28 24 53 0 0 chr10 70944413 70944451 -74644837 + AT_rich Low_complexity Low_complexity 1 38 0 2137 119 7 10 chr10 70944630 70944940 -74644348 - AluSx SINE Alu -1 311 3 546 318 38 17 chr10 70945181 70945417 -74643871 + MIR SINE MIR 21 261 -1 2226 100 10 0 chr10 70946568 70946878 -74642410 - AluSp SINE Alu 0 313 1 556 309 87 10 chr10 70947977 70948184 -74641104 + MIR SINE MIR 23 245 -17 22 0 0 0 chr10 70948819 70948841 -74640447 + AT_rich Low_complexity Low_complexity 1 22 0 647 266 48 11 chr10 70949532 70949720 -74639568 - MIR SINE MIR 0 262 68 308 224 0 0 chr10 70949755 70949813 -74639475 - L2 LINE L2 -1 3312 3255 22 0 0 0 chr10 70950437 70950459 -74638829 + AT_rich Low_complexity Low_complexity 1 22 0 291 382 80 14 chr10 70950633 70950845 -74638443 + L2 LINE L2 2836 3061 -252 727 313 80 9 chr10 70950994 70951333 -74637955 - LTR33 LTR ERVL -145 376 14 2080 121 0 0 chr10 70951389 70951700 -74637588 - AluSc SINE Alu 0 311 1 1871 147 4 0 chr10 70951891 70952170 -74637118 + AluSx SINE Alu 2 281 -31 507 264 54 8 chr10 70952495 70952624 -74636664 - L2 LINE L2 0 3313 3179 510 276 248 33 chr10 70952633 70953153 -74636135 - L2 LINE L2 -258 3055 2423 340 328 36 52 chr10 70953753 70953945 -74635343 + MIR SINE MIR 1 189 -73 244 283 123 9 chr10 70955506 70955612 -74633676 + L2 LINE L2 3187 3304 -9 363 270 58 44 chr10 70956200 70956337 -74632951 - MIR3 SINE MIR -28 180 42 1114 92 0 0 chr10 70957238 70957379 -74631909 - AluSp SINE Alu -25 288 148 785 287 36 11 chr10 70957749 70958028 -74631260 - L1ME LINE L1 -560 5602 5317 236 185 0 31 chr10 70958045 70958110 -74631178 + CT-rich Low_complexity Low_complexity 3 65 0 497 295 100 42 chr10 70958116 70958635 -74630653 - L1ME LINE L1 -863 5283 4735 1021 292 115 44 chr10 70958744 70959150 -74630138 - MLT1G1 LTR MaLR -161 394 7 302 215 108 115 chr10 70959308 70959438 -74629850 - L2 LINE L2 -3 3310 3182 902 333 55 36 chr10 70960644 70961260 -74628028 + L2 LINE L2 2160 2787 -527 219 409 16 16 chr10 70961415 70961542 -74627746 + L2 LINE L2 2957 3083 -189 2097 120 3 7 chr10 70962038 70962346 -74626942 + AluSx SINE Alu 1 307 -5 454 324 83 67 chr10 70963442 70963803 -74625485 + L2 LINE L2 2372 2738 -576 284 262 125 0 chr10 70964067 70964235 -74625053 + L1MEc LINE L1 2216 2404 -3992 578 330 84 24 chr10 70964281 70964699 -74624589 + L1MEc LINE L1 2446 2888 -3327 23 42 0 21 chr10 70966681 70966695 -74622593 + AT_rich Low_complexity Low_complexity 1 14 -33 2333 97 0 0 chr10 70966695 70967004 -74622284 + AluSc SINE Alu 1 309 0 23 42 0 21 chr10 70967004 70967037 -74622251 + AT_rich Low_complexity Low_complexity 14 47 0 390 306 45 25 chr10 70967650 70967807 -74621481 + MIR3 SINE MIR 17 176 -32 22 35 0 0 chr10 70968512 70968541 -74620747 + AT_rich Low_complexity Low_complexity 1 29 0 519 226 18 18 chr10 70969138 70969302 -74619986 - MER103 DNA DNA -1 165 2 2222 125 0 0 chr10 70971357 70971660 -74617628 - AluSx SINE Alu -9 303 1 306 294 70 41 chr10 70971782 70971952 -74617336 - MIR SINE MIR -79 129 8 21 82 0 0 chr10 70972283 70972332 -74616956 + AT_rich Low_complexity Low_complexity 1 49 0 2032 131 0 7 chr10 70972472 70972770 -74616518 - AluSx SINE Alu -16 296 1 22 35 0 0 chr10 70973417 70973446 -74615842 + AT_rich Low_complexity Low_complexity 1 29 0 345 302 43 86 chr10 70973446 70973747 -74615541 - HAL1b LINE L1 -46 1302 1015 453 291 107 12 chr10 70973882 70974126 -74615162 - HAL1b LINE L1 -464 884 618 500 258 86 79 chr10 70974183 70974450 -74614838 - MLT1H LTR MaLR -49 500 232 480 305 60 9 chr10 70974540 70974773 -74614515 - HAL1b LINE L1 -739 609 365 21 0 0 0 chr10 70974791 70974812 -74614476 + AT_rich Low_complexity Low_complexity 1 21 0 312 307 0 23 chr10 70974889 70974977 -74614311 - HAL1b LINE L1 -1182 166 81 204 40 0 0 chr10 70975198 70975223 -74614065 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 24 53 0 0 chr10 70976012 70976050 -74613238 + AT_rich Low_complexity Low_complexity 1 38 0 211 286 32 16 chr10 70976479 70976542 -74612746 + L2 LINE L2 3242 3305 -8 2158 91 3 42 chr10 70976722 70977031 -74612257 + AluSc SINE Alu 1 297 -12 971 245 25 8 chr10 70977345 70977586 -74611702 - MIR SINE MIR -4 258 14 387 297 104 22 chr10 70977643 70977825 -74611463 - MIR SINE MIR -65 197 1 383 212 118 0 chr10 70977890 70977975 -74611313 - MIR3 SINE MIR -3 205 111 23 33 0 0 chr10 70978079 70978109 -74611179 + AT_rich Low_complexity Low_complexity 1 30 0 369 294 59 63 chr10 70978697 70978918 -74610370 - MIR SINE MIR -36 226 7 786 279 95 38 chr10 70980355 70980932 -74608356 - HAL1b LINE L1 -5 1343 734 617 284 126 35 chr10 70981035 70981489 -74607799 - HAL1b LINE L1 -742 606 112 184 299 31 134 chr10 70982631 70982758 -74606530 - L2 LINE L2 -4 3268 3155 252 0 0 0 chr10 70983400 70983428 -74605860 + (TG)n Simple_repeat Simple_repeat 1 28 0 2165 102 0 7 chr10 70983453 70983746 -74605542 - AluSx SINE Alu -21 291 1 26 50 0 0 chr10 70983751 70983791 -74605497 + AT_rich Low_complexity Low_complexity 1 40 0 1007 233 45 20 chr10 70984264 70984509 -74604779 + MIR SINE MIR 12 262 0 294 316 113 30 chr10 70984637 70984770 -74604518 + L2 LINE L2 3170 3313 0 2095 118 7 0 chr10 70984886 70985190 -74604098 - AluSp SINE Alu -5 308 3 409 304 43 22 chr10 70985209 70985347 -74603941 - MIR SINE MIR -75 187 47 290 361 46 23 chr10 70986220 70986350 -74602938 - L2 LINE L2 -7 3265 3133 21 57 0 0 chr10 70987091 70987126 -74602162 + AT_rich Low_complexity Low_complexity 1 35 0 193 383 29 37 chr10 70987700 70987943 -74601345 - L2 LINE L2 -1017 2297 2057 228 35 0 0 chr10 70988008 70988037 -74601251 + (TG)n Simple_repeat Simple_repeat 2 30 0 262 200 62 25 chr10 70988232 70988312 -74600976 + L1M4 LINE L1 4280 4362 -1784 2109 105 0 3 chr10 70988330 70988615 -74600673 + AluY SINE Alu 1 284 -27 633 120 0 0 chr10 70988523 70988615 -74600673 + AluSg/x SINE Alu 192 306 0 208 0 0 0 chr10 70988615 70988638 -74600650 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 877 207 36 0 chr10 70988638 70988860 -74600428 + L1M4 LINE L1 4454 4683 -1463 2241 153 32 121 chr10 70989653 70990207 -74599081 - MLT1D LTR MaLR 0 505 1 336 337 39 10 chr10 70990246 70990451 -74598837 - MARNA DNA Mariner -13 573 363 2168 91 13 10 chr10 70990522 70990830 -74598458 + AluSp SINE Alu 1 309 -4 210 71 0 0 chr10 70990830 70990858 -74598430 + (GGAA)n Simple_repeat Simple_repeat 1 28 0 4145 27 0 0 chr10 70991462 70991946 -74597342 + L1PA3 LINE L1 5672 6155 0 36 91 0 0 chr10 70992037 70992136 -74597152 + AT_rich Low_complexity Low_complexity 1 99 0 243 355 0 11 chr10 70992832 70992925 -74596363 + GA-rich Low_complexity Low_complexity 4 95 0 2145 90 19 29 chr10 70993093 70993403 -74595885 - AluSc SINE Alu -2 307 1 334 250 62 86 chr10 70993626 70993754 -74595534 - MIR SINE MIR -60 202 78 206 341 177 22 chr10 70995012 70995329 -74593959 + L3b LINE CR1 1102 1467 -116 597 239 117 5 chr10 70995440 70995628 -74593660 - MER3 DNA MER1_type 0 209 1 21 36 0 0 chr10 70995705 70995733 -74593555 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr10 70996039 70996070 -74593218 + AT_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr10 70996167 70996195 -74593093 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr10 70996229 70996255 -74593033 + AT_rich Low_complexity Low_complexity 1 26 0 2152 96 7 0 chr10 70996398 70996705 -74592583 + AluSq SINE Alu 1 309 0 421 327 77 12 chr10 70997743 70997911 -74591377 - MIR SINE MIR -52 210 32 790 214 181 0 chr10 70999239 70999421 -74589867 - MIR SINE MIR -21 241 27 2074 113 3 3 chr10 70999446 70999746 -74589542 - AluSx SINE Alu -12 300 1 334 287 78 26 chr10 70999972 71000087 -74589201 - L2 LINE L2 0 3272 3152 596 172 0 0 chr10 71001817 71001938 -74587350 - AluJb SINE Alu 0 310 190 940 88 8 0 chr10 71001950 71002075 -74587213 - AluSp/q SINE Alu -19 294 169 1076 76 0 0 chr10 71002076 71002207 -74587081 + AluSg SINE Alu 19 149 -161 542 196 125 0 chr10 71002221 71002333 -74586955 - AluJb SINE Alu -186 126 1 278 322 249 27 chr10 71002433 71002762 -74586526 - L2 LINE L2 -61 3252 2851 228 67 0 0 chr10 71003043 71003073 -74586215 + (A)n Simple_repeat Simple_repeat 1 30 0 490 327 139 30 chr10 71003143 71003473 -74585815 - L2 LINE L2 -533 2781 2416 21 36 0 0 chr10 71003869 71003897 -74585391 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr10 71005149 71005171 -74584117 + AT_rich Low_complexity Low_complexity 1 22 0 259 358 78 37 chr10 71007827 71008070 -74581218 - L2 LINE L2 -633 2681 2429 183 80 0 0 chr10 71008802 71008827 -74580461 + (T)n Simple_repeat Simple_repeat 1 25 0 1647 123 12 4 chr10 71009618 71009871 -74579417 - L1PA16 LINE L1 -9 6157 5903 587 256 93 61 chr10 71010446 71010692 -74578596 + MIR SINE MIR 2 255 -7 24 32 0 0 chr10 71011247 71011278 -74578010 + AT_rich Low_complexity Low_complexity 1 31 0 257 67 0 22 chr10 71011278 71011323 -74577965 + (TTG)n Simple_repeat Simple_repeat 2 45 0 227 306 82 37 chr10 71011586 71011720 -74577568 - MIR SINE MIR -35 173 34 192 40 0 0 chr10 71013600 71013625 -74575663 + (TTAAA)n Simple_repeat Simple_repeat 5 29 0 22 0 0 0 chr10 71013954 71013976 -74575312 + AT_rich Low_complexity Low_complexity 1 22 0 184 245 113 66 chr10 71017050 71017156 -74572132 + MIR3 SINE MIR 91 201 -7 926 94 0 0 chr10 71017322 71017450 -74571838 - AluSg/x SINE Alu -2 310 183 602 138 0 0 chr10 71017489 71017576 -74571712 - AluSc SINE Alu -222 87 1 2194 105 0 0 chr10 71017631 71017927 -74571361 - AluSx SINE Alu -16 296 1 369 0 0 0 chr10 71018186 71018227 -74571061 + (TC)n Simple_repeat Simple_repeat 1 41 0 210 37 0 0 chr10 71018624 71018651 -74570637 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 218 321 102 40 chr10 71019167 71019295 -74569993 - MER5B DNA MER1_type -51 138 2 23 33 0 0 chr10 71020062 71020092 -74569196 + AT_rich Low_complexity Low_complexity 1 30 0 297 354 35 9 chr10 71021289 71021402 -74567886 + MIR SINE MIR 30 145 -117 549 271 41 0 chr10 71022433 71022603 -74566685 + MER69 DNA AcHobo 227 403 -823 517 239 9 0 chr10 71022595 71022704 -74566584 + MER69 DNA AcHobo 2417 2526 0 * 2530 166 48 0 chr10 71023326 71023809 -74565479 - L1MA9 LINE L1 -1 6311 5806 1832 143 17 7 chr10 71026227 71026514 -74562774 + AluJb SINE Alu 1 290 -22 339 246 16 120 chr10 71026944 71027127 -74562161 + MLT1I LTR MaLR 244 407 -2 304 260 101 41 chr10 71028258 71028427 -74560861 - MIR SINE MIR -10 252 74 289 289 21 21 chr10 71028906 71029003 -74560285 + MLT2E LTR ERVL 35 131 -497 315 247 0 54 chr10 71029205 71029298 -74559990 + LTR33A LTR ERVL 436 523 0 24 67 0 0 chr10 71030616 71030661 -74558627 + AT_rich Low_complexity Low_complexity 1 45 0 325 305 96 7 chr10 71031397 71031536 -74557752 + MIR SINE MIR 40 188 -62 663 273 148 40 chr10 71031671 71032070 -74557218 + MLT1J1 LTR MaLR 1 442 -4 2192 102 7 3 chr10 71032389 71032684 -74556604 - AluSc SINE Alu -13 296 1 191 364 0 0 chr10 71033823 71033878 -74555410 - MER5A DNA MER1_type -92 97 43 231 133 0 0 chr10 71033928 71033973 -74555315 + (TTCA)n Simple_repeat Simple_repeat 1 45 0 436 335 155 31 chr10 71034318 71034930 -74554358 - L2 LINE L2 -710 2604 1917 1850 124 23 0 chr10 71034973 71035239 -74554049 + AluSx SINE Alu 3 274 -38 24 32 0 0 chr10 71035242 71035273 -74554015 + AT_rich Low_complexity Low_complexity 1 31 0 208 135 0 27 chr10 71035275 71035312 -74553976 + (GAA)n Simple_repeat Simple_repeat 2 37 0 562 292 12 30 chr10 71035440 71035608 -74553680 - L3 LINE CR1 -3 1574 1410 2395 232 76 37 chr10 71035612 71035747 -74553541 - L1ME3A LINE L1 -3 6236 6108 267 31 0 0 chr10 71035747 71035779 -74553509 + (CACCC)n Simple_repeat Simple_repeat 4 35 0 2395 232 76 37 chr10 71035779 71036660 -74552628 - L1ME3A LINE L1 -131 6108 5158 2048 124 3 3 chr10 71036660 71036967 -74552321 + AluSc SINE Alu 1 307 -2 2395 232 76 37 chr10 71036967 71037021 -74552267 - L1ME3A LINE L1 -1081 5158 5108 460 290 65 75 chr10 71037370 71037943 -74551345 - L1ME3A LINE L1 -4596 1800 1234 1814 166 3 3 chr10 71038158 71038447 -74550841 - AluSx SINE Alu -23 289 1 320 308 28 21 chr10 71038515 71038658 -74550630 - L1ME3A LINE L1 -5461 935 792 345 313 146 18 chr10 71039435 71039716 -74549572 - L3 LINE CR1 -163 1414 1098 2134 108 14 0 chr10 71040228 71040523 -74548765 - AluSc SINE Alu -10 299 1 2634 49 0 0 chr10 71040536 71040843 -74548445 - AluY SINE Alu -4 307 1 210 37 0 0 chr10 71041364 71041391 -74547897 + (CA)n Simple_repeat Simple_repeat 1 27 0 252 309 45 27 chr10 71042459 71042569 -74546719 - MIR3 SINE MIR -11 197 86 341 327 145 37 chr10 71043053 71044014 -74545274 + L2 LINE L2 2246 3313 0 2212 109 0 0 chr10 71044706 71045009 -74544279 - AluY SINE Alu -8 303 1 2153 107 0 0 chr10 71045761 71046052 -74543236 + AluSg SINE Alu 1 291 -19 459 0 0 0 chr10 71046052 71046103 -74543185 + (CA)n Simple_repeat Simple_repeat 2 52 0 2485 52 0 0 chr10 71046821 71047126 -74542162 + AluY SINE Alu 1 305 -6 478 234 86 74 chr10 71047566 71047810 -74541478 - MIR SINE MIR -12 250 4 384 300 124 55 chr10 71047855 71048202 -74541086 + L2 LINE L2 2866 3236 -36 26 74 0 0 chr10 71048323 71048377 -74540911 + AT_rich Low_complexity Low_complexity 1 54 0 34 24 0 0 chr10 71050636 71050677 -74538611 + AT_rich Low_complexity Low_complexity 1 41 0 21 0 0 0 chr10 71051261 71051282 -74538006 + AT_rich Low_complexity Low_complexity 1 21 0 199 203 29 14 chr10 71052273 71052342 -74536946 + (TGGA)n Simple_repeat Simple_repeat 3 72 0 25 0 0 0 chr10 71055172 71055197 -74534091 + AT_rich Low_complexity Low_complexity 1 25 0 217 347 0 0 chr10 71055544 71055619 -74533669 - MIR SINE MIR -12 250 176 2427 61 0 0 chr10 71055740 71056037 -74533251 - AluY SINE Alu -14 297 1 642 274 104 11 chr10 71057901 71058126 -74531162 - MIR SINE MIR -10 252 15 1757 167 61 9 chr10 71058240 71058570 -74530718 - MER7A DNA MER2_type -1 345 1 22 35 0 0 chr10 71059558 71059587 -74529701 + AT_rich Low_complexity Low_complexity 1 29 0 2238 103 7 10 chr10 71059612 71059922 -74529366 + AluSg SINE Alu 1 309 -1 14147 132 26 16 chr10 71060014 71061893 -74527395 + Tigger1 DNA MER2_type 92 1952 -466 1809 126 65 27 chr10 71061893 71062186 -74527102 - AluSx SINE Alu -8 304 1 14147 132 26 16 chr10 71062186 71062407 -74526881 + Tigger1 DNA MER2_type 1952 2169 -249 2087 103 3 3 chr10 71062407 71062689 -74526599 - AluSc SINE Alu -27 282 1 14147 132 26 16 chr10 71062689 71062892 -74526396 + Tigger1 DNA MER2_type 2169 2418 0 21 36 0 0 chr10 71063540 71063568 -74525720 + AT_rich Low_complexity Low_complexity 1 28 0 31 0 0 0 chr10 71064816 71064847 -74524441 + AT_rich Low_complexity Low_complexity 1 31 0 1675 109 0 9 chr10 71065628 71065858 -74523430 + AluSq SINE Alu 1 228 -85 1940 119 0 48 chr10 71065894 71066205 -74523083 + AluY SINE Alu 1 296 -15 44 0 0 0 chr10 71067395 71067439 -74521849 + AT_rich Low_complexity Low_complexity 1 44 0 252 149 0 0 chr10 71068755 71068802 -74520486 + (TC)n Simple_repeat Simple_repeat 2 48 0 22 0 0 0 chr10 71069503 71069525 -74519763 + AT_rich Low_complexity Low_complexity 1 22 0 1585 159 44 44 chr10 71069645 71069941 -74519347 - AluJo SINE Alu -9 303 8 466 293 171 15 chr10 71071224 71071358 -74517930 + MIR SINE MIR 20 132 -130 692 239 0 0 chr10 71071358 71071488 -74517800 + FLAM_C SINE Alu 2 131 -2 466 293 171 15 chr10 71071488 71071558 -74517730 + MIR SINE MIR 132 256 -6 330 237 0 0 chr10 71071937 71072034 -74517254 + (TATG)n Simple_repeat Simple_repeat 2 98 0 3340 142 14 0 chr10 71072118 71072682 -74516606 - L1MA4A LINE L1 0 6303 5732 292 337 114 76 chr10 71072825 71073547 -74515741 + L2 LINE L2 2136 2884 -430 180 191 95 155 chr10 71073631 71073715 -74515573 - L2 LINE L2 -15 3298 3220 195 324 15 15 chr10 71073786 71073854 -74515434 + L2 LINE L2 3172 3239 -33 561 294 25 6 chr10 71073893 71074056 -74515232 - MIR SINE MIR -1 261 96 191 208 57 75 chr10 71074102 71074155 -74515133 - L2 LINE L2 -187 3085 3034 183 286 18 0 chr10 71075501 71075557 -74513731 + L2 LINE L2 3216 3272 0 205 299 52 41 chr10 71076149 71076246 -74513042 - L2 LINE L2 -38 3234 3137 21 0 0 0 chr10 71076562 71076583 -74512705 + AT_rich Low_complexity Low_complexity 1 21 0 740 152 36 14 chr10 71077078 71077216 -74512072 - MLT2D LTR ERVL -273 141 1 298 345 70 7 chr10 71077219 71077361 -74511927 - L2 LINE L2 -783 2531 2381 228 111 0 0 chr10 71077438 71077474 -74511814 + (CA)n Simple_repeat Simple_repeat 1 36 0 2036 89 0 95 chr10 71078758 71079094 -74510194 - AluSg SINE Alu -6 304 1 24 32 0 0 chr10 71079919 71079950 -74509338 + AT_rich Low_complexity Low_complexity 1 31 0 369 0 0 0 chr10 71080966 71081007 -74508281 + (CA)n Simple_repeat Simple_repeat 1 41 0 590 220 187 0 chr10 71081204 71081354 -74507934 - MER5A DNA MER1_type 0 189 12 183 184 0 82 chr10 71082020 71082069 -74507219 + L2 LINE L2 3268 3312 -1 243 0 0 0 chr10 71083332 71083359 -74505929 + (T)n Simple_repeat Simple_repeat 1 27 0 620 262 58 17 chr10 71083395 71083567 -74505721 + Charlie8 DNA MER1_type 85 263 -2154 22 0 0 0 chr10 71085182 71085204 -74504084 + AT_rich Low_complexity Low_complexity 1 22 0 187 273 0 0 chr10 71085997 71086041 -74503247 + L3 LINE CR1 1533 1576 -1 21 36 0 0 chr10 71086618 71086646 -74502642 + AT_rich Low_complexity Low_complexity 1 28 0 209 268 18 0 chr10 71086650 71086706 -74502582 + L2 LINE L2 3216 3272 0 220 258 45 0 chr10 71087468 71087534 -74501754 - L3 LINE CR1 -910 667 599 428 291 24 71 chr10 71088080 71088243 -74501045 - MIR3 SINE MIR -17 191 37 243 192 19 0 chr10 71088380 71088432 -74500856 + L2 LINE L2 3261 3313 0 230 0 33 0 chr10 71088589 71088619 -74500669 + (TA)n Simple_repeat Simple_repeat 2 32 0 205 156 0 0 chr10 71089303 71089335 -74499953 + GA-rich Low_complexity Low_complexity 4 35 0 216 67 0 0 chr10 71089652 71089682 -74499606 + (TTTTTA)n Simple_repeat Simple_repeat 5 34 0 225 0 0 0 chr10 71089818 71089843 -74499445 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 1393 58 0 0 chr10 71089843 71090017 -74499271 - L1PA3 LINE L1 -4 6151 5978 324 0 0 0 chr10 71090595 71090631 -74498657 + (CA)n Simple_repeat Simple_repeat 2 37 0 21 57 0 0 chr10 71090873 71090908 -74498380 + AT_rich Low_complexity Low_complexity 1 35 0 1253 143 24 24 chr10 71091252 71091461 -74497827 - AluJo SINE Alu -19 293 85 388 222 0 0 chr10 71091674 71091746 -74497542 + AluJ/FRAM SINE Alu 224 295 -7 25 0 0 0 chr10 71093651 71093676 -74495612 + AT_rich Low_complexity Low_complexity 1 25 0 2198 100 3 0 chr10 71095477 71095778 -74493510 - AluY SINE Alu -9 302 1 24 85 0 0 chr10 71096862 71096921 -74492367 + AT_rich Low_complexity Low_complexity 1 59 0 2029 134 15 15 chr10 71097267 71097610 -74491678 - MER61A LTR ERV1 0 343 1 451 239 137 88 chr10 71098653 71098858 -74490430 + MIR SINE MIR 48 262 0 234 0 0 0 chr10 71100079 71100105 -74489183 + (TCTA)n Simple_repeat Simple_repeat 3 28 0 326 296 96 8 chr10 71101662 71101787 -74487501 + MIR SINE MIR 16 151 -111 312 293 40 0 chr10 71102178 71102277 -74487011 - MER5A DNA MER1_type 0 189 87 242 208 0 0 chr10 71104553 71104601 -74484687 + MIR SINE MIR 162 209 -53 21 36 0 0 chr10 71107110 71107138 -74482150 + AT_rich Low_complexity Low_complexity 1 28 0 446 279 62 11 chr10 71108156 71108335 -74480953 - MER5A DNA MER1_type -1 188 1 21 57 0 0 chr10 71109108 71109143 -74480145 + AT_rich Low_complexity Low_complexity 1 35 0 297 209 0 15 chr10 71109984 71110051 -74479237 + HsTC2 DNA Tc2 20 85 -1813 251 239 11 0 chr10 71110243 71110331 -74478957 + (TA)n Simple_repeat Simple_repeat 2 90 0 219 273 45 18 chr10 71110422 71110532 -74478756 + (CATATA)n Simple_repeat Simple_repeat 5 117 0 26 0 0 0 chr10 71110611 71110637 -74478651 + AT_rich Low_complexity Low_complexity 1 26 0 236 247 27 0 chr10 71113936 71114009 -74475279 + (TA)n Simple_repeat Simple_repeat 2 76 0 278 291 219 13 chr10 71114640 71114791 -74474497 - MIR SINE MIR -12 250 69 324 0 0 0 chr10 71115587 71115623 -74473665 + (CA)n Simple_repeat Simple_repeat 1 36 0 1187 209 62 56 chr10 71116158 71116498 -74472790 + MER2 DNA MER2_type 1 342 -2 201 152 0 0 chr10 71117024 71117057 -74472231 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 231 88 0 0 chr10 71117222 71117256 -74472032 + (CTCA)n Simple_repeat Simple_repeat 2 35 0 194 412 24 36 chr10 71117322 71117487 -74471801 + L2 LINE L2 3110 3272 0 217 175 52 41 chr10 71117731 71117828 -74471460 + T-rich Low_complexity Low_complexity 4 101 0 21 36 0 0 chr10 71118492 71118520 -74470768 + AT_rich Low_complexity Low_complexity 1 28 0 2039 128 0 0 chr10 71119589 71119894 -74469394 + AluSx SINE Alu 1 305 0 247 286 61 20 chr10 71119963 71120061 -74469227 + L2 LINE L2 3169 3270 -2 22 0 0 0 chr10 71121097 71121119 -74468169 + AT_rich Low_complexity Low_complexity 1 22 0 636 318 82 9 chr10 71122307 71122527 -74466761 + MIR SINE MIR 6 241 -21 2132 102 3 10 chr10 71122691 71123019 -74466269 - AluSp SINE Alu 0 313 1 1805 172 42 3 chr10 71123106 71123438 -74465850 - MER7A DNA MER2_type 0 346 4 283 280 108 32 chr10 71123480 71123637 -74465651 + MIR SINE MIR 3 171 -91 4167 173 29 6 chr10 71124612 71125342 -74463946 + Tigger7 DNA MER2_type 24 770 -1717 2253 115 8 38 chr10 71125347 71125720 -74463568 + Tigger7 DNA MER2_type 2126 2487 0 1984 131 0 26 chr10 71125796 71126101 -74463187 - AluSq SINE Alu -12 301 5 4125 186 20 16 chr10 71126524 71127338 -74461950 - L1MB8 LINE L1 -1 6177 5361 1127 210 126 29 chr10 71127343 71127402 -74461886 - MER2 DNA MER2_type -5 340 288 1120 193 41 58 chr10 71127402 71127518 -74461770 + MER8 DNA MER2_type 1 117 -122 2303 92 0 0 chr10 71127518 71127811 -74461477 + AluY SINE Alu 1 293 -18 1120 193 41 58 chr10 71127811 71127937 -74461351 + MER8 DNA MER2_type 117 239 0 1127 210 126 29 chr10 71127937 71128042 -74461246 - MER2 DNA MER2_type -57 288 195 2744 168 122 7 chr10 71128042 71128584 -74460704 + MER6A DNA MER2_type 1 604 -1 1127 210 126 29 chr10 71128584 71128728 -74460560 - MER2 DNA MER2_type -150 195 1 4360 204 27 78 chr10 71128728 71129073 -74460215 - L1MB8 LINE L1 -784 5362 5001 1036 31 78 0 chr10 71129073 71129202 -74460086 + MER85 DNA T2_type 1 139 0 4360 204 27 78 chr10 71129202 71129308 -74459980 - L1MB8 LINE L1 -1145 5001 4891 1621 172 3 41 chr10 71129308 71129628 -74459660 + AluJb SINE Alu 4 311 -1 4360 204 27 78 chr10 71129628 71129683 -74459605 - L1MB8 LINE L1 -1255 4891 4835 1524 174 6 55 chr10 71129683 71129994 -74459294 - AluJb SINE Alu -16 296 1 4360 204 27 78 chr10 71129994 71130194 -74459094 - L1MB8 LINE L1 -1311 4835 4626 468 90 0 70 chr10 71130194 71130294 -74458994 - L1MA4 LINE L1 -7 6293 6201 4360 204 27 78 chr10 71130294 71131004 -74458284 - L1MB8 LINE L1 -1520 4626 4016 2238 91 10 7 chr10 71132159 71132457 -74456831 - AluSc SINE Alu -10 299 1 958 265 92 24 chr10 71132596 71133244 -74456044 - L2 LINE L2 -98 3215 2309 304 334 140 40 chr10 71134065 71134570 -74454718 - L2 LINE L2 -41 3231 2664 245 227 195 47 chr10 71135078 71135206 -74454082 - MIR SINE MIR -65 197 51 2108 119 7 7 chr10 71136600 71136895 -74452393 - AluSx SINE Alu -17 295 1 21 0 0 0 chr10 71137528 71137549 -74451739 + AT_rich Low_complexity Low_complexity 1 21 0 1129 221 28 21 chr10 71138374 71138659 -74450629 - L1ME3A LINE L1 -5 6165 5879 858 232 0 30 chr10 71138703 71138901 -74450387 - L1ME3A LINE L1 -425 5745 5554 269 394 61 0 chr10 71139115 71139247 -74450041 - L2 LINE L2 -10 3262 3123 31 26 0 0 chr10 71139556 71139594 -74449694 + AT_rich Low_complexity Low_complexity 1 38 0 423 344 122 29 chr10 71139765 71140248 -74449040 + L2 LINE L2 2199 2726 -588 28 0 0 0 chr10 71140469 71140497 -74448791 + AT_rich Low_complexity Low_complexity 1 28 0 5177 118 5 9 chr10 71140497 71140859 -74448429 - L1PB1 LINE L1 -7 6144 5782 447 19 0 0 chr10 71140859 71140911 -74448377 + (TA)n Simple_repeat Simple_repeat 1 52 0 5177 118 5 9 chr10 71140911 71141344 -74447944 - L1PB1 LINE L1 -369 5782 5352 41942 37 25 2 chr10 71141359 71147375 -74441913 - L1PA3 LINE L1 0 6155 5 14159 191 72 9 chr10 71147355 71148293 -74440995 - L1PBa LINE L1 -759 6103 5225 * 189 0 0 0 chr10 71148293 71148314 -74440974 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 14159 191 72 9 chr10 71148314 71149407 -74439881 - L1PBa LINE L1 -1637 5225 4202 2265 106 7 0 chr10 71149407 71149708 -74439580 - AluSq SINE Alu -10 303 1 14159 191 72 9 chr10 71149708 71150650 -74438638 - L1PBa LINE L1 -2660 4202 3321 2353 95 3 0 chr10 71150650 71150956 -74438332 + AluSp SINE Alu 1 307 -6 14159 191 72 9 chr10 71150956 71153571 -74435717 - L1PBa LINE L1 -3541 3321 129 2713 149 16 16 chr10 71153619 71154108 -74435180 + L1MA9 LINE L1 5824 6312 0 187 356 0 17 chr10 71154229 71154288 -74435000 + L2 LINE L2 3193 3250 -22 270 296 80 48 chr10 71155586 71155711 -74433577 - MIR SINE MIR -88 174 46 2039 104 0 0 chr10 71156202 71156471 -74432817 + AluY SINE Alu 35 303 -8 408 356 40 5 chr10 71156488 71156690 -74432598 + MIR SINE MIR 1 209 -53 2269 237 34 7 chr10 71156724 71157281 -74432007 - L1MD3 LINE L1 0 7995 7424 562 290 59 65 chr10 71157372 71157662 -74431626 + L2 LINE L2 3022 3309 -4 181 265 299 8 chr10 71158728 71158845 -74430443 - L2 LINE L2 0 3313 3163 1197 274 89 50 chr10 71158932 71159414 -74429874 - L2 LINE L2 -352 2962 2462 443 241 71 57 chr10 71159484 71159696 -74429592 - LTR16A LTR ERVL -93 357 143 403 174 0 93 chr10 71159716 71159802 -74429486 - Tigger5 DNA MER2_type -2245 78 1 2282 144 3 0 chr10 71159870 71160230 -74429058 - MER46B DNA MER2_type 0 236 1 327 288 0 0 chr10 71161430 71161496 -74427792 + L2 LINE L2 3231 3296 -17 183 42 0 0 chr10 71161497 71161521 -74427767 + (TGAA)n Simple_repeat Simple_repeat 3 26 0 904 294 130 49 chr10 71162371 71164114 -74425174 + L1MEd LINE L1 430 2370 -913 1865 273 100 41 chr10 71164172 71165051 -74424237 + L1MEd LINE L1 2664 3647 -2482 180 0 0 0 chr10 71165051 71165071 -74424217 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 1865 273 100 41 chr10 71165071 71165503 -74423785 + L1MEd LINE L1 3647 4052 -2077 352 286 29 21 chr10 71165525 71165665 -74423623 + L1ME3A LINE L1 5811 5951 -219 269 365 0 24 chr10 71166159 71166285 -74423003 - MIR SINE MIR -66 142 20 319 329 47 27 chr10 71166350 71166499 -74422789 + L2 LINE L2 3162 3313 0 28 0 0 0 chr10 71167271 71167299 -74421989 + AT_rich Low_complexity Low_complexity 1 28 0 647 153 63 0 chr10 71167456 71167567 -74421721 + L1MA7 LINE L1 6148 6265 -26 401 291 97 81 chr10 71167602 71167715 -74421573 - L1MEd LINE L1 -2882 3247 3137 2103 136 0 0 chr10 71167715 71168017 -74421271 - AluY SINE Alu -9 302 1 401 291 97 81 chr10 71168017 71168697 -74420591 - L1MEd LINE L1 -2992 3137 2441 1999 124 4 0 chr10 71168700 71168998 -74420290 + AluSx SINE Alu 7 305 0 332 245 56 21 chr10 71169047 71169190 -74420098 - L1MEd LINE L1 -3710 2419 2272 329 330 87 35 chr10 71169394 71169624 -74419664 - L1MEd LINE L1 -4967 1152 911 2267 85 0 30 chr10 71169647 71169952 -74419336 - AluSg1 SINE Alu -13 296 1 325 303 97 40 chr10 71170067 71170242 -74419046 + MER5A DNA MER1_type 4 188 -1 1004 191 113 44 chr10 71170523 71170816 -74418472 + Charlie4a DNA MER1_type 1 313 -195 2126 111 0 0 chr10 71170893 71171181 -74418107 - AluSq SINE Alu -10 303 16 223 337 0 10 chr10 71171442 71171543 -74417745 + CT-rich Low_complexity Low_complexity 4 103 0 3358 157 63 32 chr10 71171606 71172292 -74416996 - MER67C LTR ERV1 -2 708 2 2942 114 29 23 chr10 71172750 71173381 -74415907 + LTR8A LTR ERV1 1 724 -3 2361 123 71 17 chr10 71173466 71173872 -74415416 - MSTA LTR MaLR 0 428 1 462 100 14 0 chr10 71174044 71174114 -74415174 + LTR8A LTR ERV1 271 341 -386 2436 118 22 0 chr10 71174566 71174921 -74414367 - THE1B LTR MaLR -1 363 1 21 0 0 0 chr10 71175217 71175238 -74414050 + AT_rich Low_complexity Low_complexity 1 21 0 22 88 0 0 chr10 71175428 71175485 -74413803 + AT_rich Low_complexity Low_complexity 1 57 0 441 301 141 0 chr10 71176086 71176242 -74413046 + MER45A DNA AcHobo 1 178 0 306 0 0 0 chr10 71176538 71176578 -74412710 + L1PA4 LINE L1 6113 6152 -3 2079 114 0 0 chr10 71178392 71178700 -74410588 + AluY SINE Alu 17 311 0 259 233 38 43 chr10 71178878 71179070 -74410218 + CT-rich Low_complexity Low_complexity 1 190 0 719 210 92 26 chr10 71179879 71180074 -74409214 - MER3 DNA MER1_type 0 209 2 213 353 98 23 chr10 71182577 71182710 -74406578 - MIR SINE MIR -92 170 28 381 306 34 29 chr10 71182874 71183083 -74406205 - L1MC4 LINE L1 -1043 6999 6790 4149 127 42 19 chr10 71183153 71183875 -74405413 - L1MC1 LINE L1 0 6333 5596 5153 99 56 4 chr10 71183881 71184681 -74404607 + L1PA13 LINE L1 5303 6144 -19 21 57 0 0 chr10 71184703 71184738 -74404550 + AT_rich Low_complexity Low_complexity 1 35 0 538 170 38 0 chr10 71184739 71184845 -74404443 - L1MA9 LINE L1 -23 6289 6180 5714 176 28 30 chr10 71184847 71186840 -74402448 - L1MA9 LINE L1 -231 6081 4092 1924 164 34 25 chr10 71186826 71187262 -74402026 - L1MC1 LINE L1 -716 5617 5176 * 25 0 0 0 chr10 71187352 71187377 -74401911 + AT_rich Low_complexity Low_complexity 1 25 0 24 85 0 0 chr10 71187472 71187531 -74401757 + AT_rich Low_complexity Low_complexity 1 59 0 21 71 0 0 chr10 71188121 71188163 -74401125 + AT_rich Low_complexity Low_complexity 1 42 0 4432 140 22 23 chr10 71188433 71188894 -74400394 - L1MA8 LINE L1 -3 6288 5827 1728 179 0 40 chr10 71188894 71189218 -74400070 - AluJb SINE Alu 0 312 2 4432 140 22 23 chr10 71189218 71189541 -74399747 - L1MA8 LINE L1 -464 5827 5505 1331 168 5 0 chr10 71189625 71189833 -74399455 - AluJb SINE Alu -103 209 1 343 207 138 35 chr10 71189986 71190073 -74399215 + L2 LINE L2 3150 3245 -27 1671 179 3 33 chr10 71190163 71190470 -74398818 + AluJb SINE Alu 3 300 -12 296 145 0 16 chr10 71190479 71190541 -74398747 + (GA)n Simple_repeat Simple_repeat 2 62 0 293 309 137 24 chr10 71190686 71190830 -74398458 + MIR SINE MIR 49 211 -51 435 261 18 0 chr10 71190830 71190941 -74398347 + MIR SINE MIR 2 114 -148 22 35 0 0 chr10 71190976 71191005 -74398283 + AT_rich Low_complexity Low_complexity 1 29 0 258 290 16 0 chr10 71191072 71191134 -74398154 - MIR SINE MIR -197 65 3 22 0 0 0 chr10 71191183 71191205 -74398083 + AT_rich Low_complexity Low_complexity 1 22 0 2144 117 3 23 chr10 71192000 71192307 -74396981 - AluSg SINE Alu -9 301 1 2294 110 3 0 chr10 71192621 71192929 -74396359 + AluSc SINE Alu 1 309 0 8395 130 8 2 chr10 71193036 71194327 -74394961 + HSMAR2 DNA Mariner 3 1301 -1 8489 28 3 0 chr10 71194346 71196130 -74393158 - L1PA4 LINE L1 0 6155 4367 250 30 0 0 chr10 71196130 71196163 -74393125 + L1P LINE L1 2818 2850 -3296 24 77 0 0 chr10 71196196 71196248 -74393040 + AT_rich Low_complexity Low_complexity 1 52 0 283 222 0 33 chr10 71196358 71196448 -74392840 + (CATATA)n Simple_repeat Simple_repeat 2 88 0 23 0 0 0 chr10 71196828 71196851 -74392437 + AT_rich Low_complexity Low_complexity 1 23 0 258 252 102 46 chr10 71196933 71197116 -74392172 + MIR SINE MIR 33 222 -40 268 335 179 6 chr10 71197142 71197321 -74391967 - MIR SINE MIR -21 241 32 1711 156 7 17 chr10 71198192 71198480 -74390808 - AluJo SINE Alu -7 305 21 180 0 0 0 chr10 71198532 71198552 -74390736 + (T)n Simple_repeat Simple_repeat 1 20 0 606 258 163 6 chr10 71199463 71199641 -74389647 - MER45C DNA AcHobo -1 952 747 438 270 11 0 chr10 71199748 71199837 -74389451 - MER45C DNA AcHobo -150 803 714 549 265 113 9 chr10 71199905 71200132 -74389156 - MER45C DNA AcHobo -688 265 1 2412 161 23 29 chr10 71200988 71201473 -74387815 - MLT1D LTR MaLR -4 501 20 320 328 48 8 chr10 71201561 71201686 -74387602 + L2 LINE L2 3143 3272 0 180 238 0 0 chr10 71202503 71202545 -74386743 + L2 LINE L2 3271 3312 -1 25 0 0 0 chr10 71202735 71202760 -74386528 + AT_rich Low_complexity Low_complexity 1 25 0 397 113 0 38 chr10 71202877 71202957 -74386331 + (TCCC)n Simple_repeat Simple_repeat 4 80 0 433 330 121 36 chr10 71204457 71204878 -74384410 - LTR16A LTR ERVL 0 457 1 2132 136 0 3 chr10 71205054 71205355 -74383933 - AluSx SINE Alu -12 300 1 209 108 27 0 chr10 71205494 71205531 -74383757 + (TA)n Simple_repeat Simple_repeat 1 38 0 333 320 64 56 chr10 71205683 71206074 -74383214 - L2 LINE L2 -44 3228 2835 905 200 11 17 chr10 71206265 71206445 -74382843 - AluJb SINE Alu -1 311 133 2339 101 3 0 chr10 71206448 71206754 -74382534 - AluSp SINE Alu -6 307 1 1282 172 99 8 chr10 71206952 71207252 -74382036 - MER33 DNA MER1_type -23 301 1 8815 176 20 15 chr10 71207263 71209869 -74379419 - L1PA14 LINE L1 -2 6159 3540 1843 146 10 14 chr10 71209899 71210194 -74379094 - AluSx SINE Alu -18 294 1 957 312 50 72 chr10 71210379 71210918 -74378370 + MLT1G1 LTR MaLR 1 527 -68 2375 96 0 0 chr10 71210918 71211220 -74378068 - AluSx SINE Alu -10 302 1 957 312 50 72 chr10 71211220 71211280 -74378008 + MLT1G1 LTR MaLR 527 587 -8 6888 230 72 38 chr10 71212378 71216829 -74372459 - L1MD2 LINE L1 0 6636 2027 4339 211 14 42 chr10 71216842 71217309 -74371979 - L1MB1 LINE L1 -2 6166 5688 2035 142 7 0 chr10 71217309 71217611 -74371677 + AluJb SINE Alu 1 304 -8 4339 211 14 42 chr10 71217611 71218650 -74370638 - L1MB1 LINE L1 -480 5688 4713 3914 54 17 0 chr10 71218651 71219132 -74370156 - LTR2B LTR ERV1 0 490 2 10207 146 4 7 chr10 71219133 71220745 -74368543 - Harlequin LTR ERV1 0 6896 5289 859 144 21 110 chr10 71220745 71220981 -74368307 - L1MB1 LINE L1 -1828 4318 4104 * 4512 228 26 14 chr10 71220977 71222234 -74367054 + L1 LINE L1 2362 3633 -2513 324 53 0 0 chr10 71222262 71222300 -74366988 - tRNA-Gly-GGA tRNA tRNA -37 38 1 189 0 0 0 chr10 71222494 71222515 -74366773 + (CA)n Simple_repeat Simple_repeat 2 22 0 183 244 0 0 chr10 71222748 71222789 -74366499 - MIR SINE MIR -209 53 13 503 298 33 28 chr10 71222808 71223023 -74366265 - L2 LINE L2 0 3313 3098 25 51 0 0 chr10 71223916 71223955 -74365333 + AT_rich Low_complexity Low_complexity 1 39 0 412 299 70 9 chr10 71224432 71224624 -74364664 + MIR SINE MIR 2 206 -56 522 257 16 82 chr10 71224627 71224769 -74364519 + MER5B DNA MER1_type 3 132 -46 2250 115 0 0 chr10 71224769 71225065 -74364223 + AluSx SINE Alu 1 296 -16 522 257 16 82 chr10 71225065 71225105 -74364183 + MER5B DNA MER1_type 132 173 -5 227 259 62 25 chr10 71225086 71225167 -74364121 + MIR SINE MIR 173 256 -6 * 208 325 0 0 chr10 71225524 71225604 -74363684 + GA-rich Low_complexity Low_complexity 3 82 0 992 152 86 43 chr10 71226771 71226981 -74362307 - MER20 DNA MER1_type 0 219 1 210 264 64 0 chr10 71226996 71227063 -74362225 - MIR SINE MIR -58 150 79 231 307 0 40 chr10 71227490 71227640 -74361648 + C-rich Low_complexity Low_complexity 6 149 0 523 242 159 6 chr10 71228979 71229161 -74360127 + MER2 DNA MER2_type 135 344 -1 2409 96 0 0 chr10 71230694 71231006 -74358282 - AluSp SINE Alu 0 313 2 189 254 149 0 chr10 71231962 71232029 -74357259 - MIR SINE MIR -2 260 184 22 35 0 0 chr10 71234077 71234106 -74355182 + AT_rich Low_complexity Low_complexity 1 29 0 269 321 175 21 chr10 71234122 71234350 -74354938 - MIR SINE MIR 0 262 4 421 227 270 5 chr10 71234381 71234566 -74354722 - MIR SINE MIR 0 262 29 740 291 69 48 chr10 71235692 71236255 -74353033 + HAL1 LINE L1 486 1060 -1447 1425 158 10 10 chr10 71236691 71236982 -74352306 + L1MA7 LINE L1 5999 6289 -2 298 215 13 13 chr10 71236995 71237074 -74352214 + MLT1I LTR MaLR 324 402 -7 988 279 69 24 chr10 71237135 71237389 -74351899 + HAL1 LINE L1 1994 2235 -272 2049 80 0 8 chr10 71237389 71237651 -74351637 - AluY SINE Alu -14 297 38 988 279 69 24 chr10 71237651 71237888 -74351400 + HAL1 LINE L1 2235 2507 0 29 28 0 0 chr10 71238015 71238051 -74351237 + AT_rich Low_complexity Low_complexity 1 36 0 1329 199 30 14 chr10 71238206 71238327 -74350961 + AluJo SINE Alu 1 118 -194 453 19 0 0 chr10 71238327 71238381 -74350907 + (TTAAA)n Simple_repeat Simple_repeat 3 56 0 1329 199 30 14 chr10 71238381 71238555 -74350733 + AluJo SINE Alu 118 301 -11 2209 130 19 26 chr10 71241210 71241588 -74347700 + THE1C LTR MaLR 1 375 0 1957 166 0 3 chr10 71242292 71242600 -74346688 + AluJo SINE Alu 1 307 -5 402 338 64 10 chr10 71243042 71243246 -74346042 + MIR SINE MIR 3 217 -45 1800 252 107 17 chr10 71243269 71244050 -74345238 + L1ME2 LINE L1 5263 6130 -34 371 297 37 68 chr10 71244224 71244568 -74344720 + L1M4 LINE L1 2255 2575 -3571 1648 197 3 3 chr10 71244568 71244863 -74344425 + AluJo SINE Alu 1 295 -17 371 297 37 68 chr10 71244863 71245107 -74344181 + L1M4 LINE L1 2575 2825 -3321 755 290 8 35 chr10 71245121 71245376 -74343912 - MIR SINE MIR 0 262 15 239 377 37 19 chr10 71245781 71245996 -74343292 - L3 LINE CR1 -336 1241 1023 443 293 66 23 chr10 71246405 71246664 -74342624 + L1ME4a LINE L1 5636 5905 -216 637 257 6 12 chr10 71246667 71246838 -74342450 + L1MC5 LINE L1 7727 7896 -65 22 70 0 0 chr10 71246897 71246940 -74342348 + AT_rich Low_complexity Low_complexity 1 43 0 4308 118 3 2 chr10 71247512 71248146 -74341142 + MER41B LTR ERV1 1 635 0 5565 80 17 3 chr10 71248238 71248993 -74340295 - MER4E LTR ERV1 0 766 1 2847 107 49 9 chr10 71249324 71249771 -74339517 - MER4C LTR ERV1 0 465 1 182 256 179 26 chr10 71249782 71249860 -74339428 - MIR3 SINE MIR -112 96 7 919 249 31 81 chr10 71250050 71250407 -74338881 + LTR29 LTR ERV1 1 339 -283 1906 149 44 20 chr10 71250407 71250750 -74338538 - MER61C LTR ERV1 0 434 84 1045 159 31 44 chr10 71250766 71250993 -74338295 + LTR48 LTR ERV1 521 744 -43 21 0 0 0 chr10 71252147 71252168 -74337120 + AT_rich Low_complexity Low_complexity 1 21 0 208 299 45 0 chr10 71252236 71252303 -74336985 - L2 LINE L2 -8 3305 3236 226 202 45 22 chr10 71252511 71252600 -74336688 - L1M4 LINE L1 -1045 5599 5509 256 232 0 18 chr10 71252673 71252729 -74336559 - L1M4 LINE L1 -6208 334 280 2350 113 116 3 chr10 71252780 71253161 -74336127 + MER39B LTR ERV1 3 426 -227 4206 158 20 20 chr10 71253162 71253873 -74335415 + MER50 LTR ERV1 1 711 -23 1021 134 56 69 chr10 71253874 71254105 -74335183 + MER39B LTR ERV1 424 651 -2 1045 155 141 5 chr10 71254107 71254328 -74334960 - L1M4 LINE L1 -6235 411 15 344 316 105 37 chr10 71254389 71254819 -74334469 - MARNA DNA Mariner -22 564 106 1141 91 46 51 chr10 71254865 71255062 -74334226 + LTR23 LTR ERV1 1 196 -241 419 125 80 0 chr10 71255086 71255174 -74334114 + MER34C LTR ERV1 423 517 -68 283 125 18 36 chr10 71255247 71255303 -74333985 + MER34C LTR ERV1 531 585 0 258 214 143 31 chr10 71255309 71255407 -74333881 - MIR3 SINE MIR -22 186 78 201 340 0 0 chr10 71255425 71255478 -74333810 - L2 LINE L2 -10 3262 3210 818 290 17 8 chr10 71256355 71256593 -74332695 + MIR SINE MIR 22 261 -1 2198 123 0 0 chr10 71257081 71257382 -74331906 + AluSg SINE Alu 3 303 -7 801 178 7 0 chr10 71258861 71258996 -74330292 + FRAM SINE Alu 23 158 -18 321 252 116 20 chr10 71259093 71259240 -74330048 - Charlie7 DNA MER1_type -2451 161 1 286 282 92 30 chr10 71259358 71259489 -74329799 - MIR SINE MIR -37 225 87 419 63 16 0 chr10 71259767 71259830 -74329458 + (TGGA)n Simple_repeat Simple_repeat 2 65 0 1386 197 42 24 chr10 71259833 71260122 -74329166 - AluJo SINE Alu -13 299 6 737 287 45 8 chr10 71260503 71260747 -74328541 - MIR SINE MIR 0 262 10 502 289 84 48 chr10 71261034 71261283 -74328005 + MIR SINE MIR 1 258 -4 3573 144 58 14 chr10 71261816 71262442 -74326846 - MER39B LTR ERV1 0 653 1 3827 35 2 0 chr10 71263538 71264001 -74325287 - L1PA4 LINE L1 0 6155 5692 248 218 18 18 chr10 71264194 71264249 -74325039 + L2 LINE L2 3218 3272 0 2682 331 60 23 chr10 71266234 71266673 -74322615 - HERVL LTR ERVL -948 4706 4284 2407 93 0 0 chr10 71266673 71266984 -74322304 + AluSq SINE Alu 1 311 -2 2682 331 60 23 chr10 71266984 71267838 -74321450 - HERVL LTR ERVL -1370 4284 3366 1439 324 42 27 chr10 71268220 71268950 -74320338 - HERVL LTR ERVL -1844 3810 3093 1634 96 101 0 chr10 71268950 71269169 -74320119 - AluSc SINE Alu -19 290 50 1439 324 42 27 chr10 71269169 71269724 -74319564 - HERVL LTR ERVL -2561 3093 1912 276 256 23 12 chr10 71269913 71269999 -74319289 - HERVL LTR ERVL -3842 1643 1557 994 235 0 0 chr10 71270011 71270198 -74319090 + MER5A DNA MER1_type 2 188 -1 649 334 40 21 chr10 71270404 71270784 -74318504 - HERVL LTR ERVL -4322 1442 1056 27 62 0 0 chr10 71270946 71270994 -74318294 + AT_rich Low_complexity Low_complexity 1 48 0 228 125 0 0 chr10 71270994 71271034 -74318254 - L1MA9 LINE L1 -38 6274 6235 5015 109 22 30 chr10 71271309 71271708 -74317580 + L1MA8 LINE L1 5428 5829 -462 2307 43 0 4 chr10 71271708 71271984 -74317304 + AluY SINE Alu 1 275 -36 1091 15 8 0 chr10 71271987 71272120 -74317168 + (GAAA)n Simple_repeat Simple_repeat 3 136 0 5015 109 22 30 chr10 71272120 71272586 -74316702 + L1MA8 LINE L1 5831 6290 -1 885 311 64 25 chr10 71272840 71272956 -74316332 - LTR33 LTR ERVL -1 520 410 1038 205 5 5 chr10 71272956 71273141 -74316147 + MER5A DNA MER1_type 5 189 0 885 311 64 25 chr10 71273141 71273461 -74315827 - LTR33 LTR ERVL -111 410 67 258 343 141 55 chr10 71274688 71275015 -74314273 - L2 LINE L2 -14 3258 2904 2252 61 0 4 chr10 71275016 71275293 -74313995 + AluY SINE Alu 1 276 -35 910 19 0 0 chr10 71275293 71275399 -74313889 + L1HS LINE L1 6049 6154 -1 314 335 105 30 chr10 71275408 71275616 -74313672 - L2 LINE L2 -411 2903 2712 183 42 0 0 chr10 71275616 71275640 -74313648 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 314 335 105 30 chr10 71275640 71275804 -74313484 - L2 LINE L2 -602 2712 2503 340 364 110 26 chr10 71275864 71276246 -74313042 - L2 LINE L2 -1217 2097 1684 412 357 88 0 chr10 71277063 71277245 -74312043 + MIR SINE MIR 9 206 -56 243 79 0 0 chr10 71277488 71277526 -74311762 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 2467 119 17 6 chr10 71278235 71278595 -74310693 + THE1B LTR MaLR 1 364 0 262 267 23 114 chr10 71278763 71278894 -74310394 - MIR3 SINE MIR -38 170 52 225 245 0 0 chr10 71279568 71279617 -74309671 + (TG)n Simple_repeat Simple_repeat 1 49 0 2444 103 11 29 chr10 71280546 71280926 -74308362 - THE1C LTR MaLR -2 373 1 879 212 38 21 chr10 71281436 71281664 -74307624 + L1ME1 LINE L1 5928 6161 -5 299 280 0 34 chr10 71281873 71281972 -74307316 + L2 LINE L2 878 974 -2340 243 61 0 0 chr10 71281972 71282005 -74307283 + (CA)n Simple_repeat Simple_repeat 1 33 0 299 280 0 34 chr10 71282005 71282023 -74307265 + L2 LINE L2 974 991 -2323 2228 115 0 0 chr10 71282102 71282398 -74306890 - AluSg SINE Alu -14 296 1 255 353 12 0 chr10 71282703 71282788 -74306500 + L2 LINE L2 3227 3312 -1 2118 61 15 0 chr10 71283206 71283493 -74305795 + AluY SINE Alu 25 315 0 271 393 102 10 chr10 71283569 71283765 -74305523 - L2 LINE L2 -548 2766 2553 22 35 0 0 chr10 71284486 71284515 -74304773 + AT_rich Low_complexity Low_complexity 1 29 0 845 252 259 8 chr10 71284910 71285303 -74303985 + L2 LINE L2 1883 2374 -940 424 310 78 28 chr10 71285578 71285862 -74303426 + HAL1b LINE L1 583 880 -468 995 206 101 16 chr10 71286092 71286408 -74302880 + HAL1b LINE L1 1000 1342 -6 237 167 0 0 chr10 71287184 71287238 -74302050 + T-rich Low_complexity Low_complexity 1 54 0 1729 42 0 0 chr10 71287241 71287455 -74301833 - L1PA4 LINE L1 -3 6152 5939 2202 92 3 3 chr10 71287455 71287749 -74301539 - AluSc SINE Alu -15 294 1 314 277 36 36 chr10 71288327 71288439 -74300849 + MIR3 SINE MIR 49 160 -48 727 300 99 43 chr10 71288524 71288880 -74300408 + L2 LINE L2 2773 3147 -166 2568 216 33 11 chr10 71288880 71289427 -74299861 + MER68 LTR ERV1 1 559 -3 227 265 0 0 chr10 71289459 71289508 -74299780 + L2 LINE L2 3265 3313 0 2171 131 0 0 chr10 71289637 71289942 -74299346 + AluSq SINE Alu 1 305 -8 932 298 51 47 chr10 71291642 71292112 -74297176 + L2 LINE L2 2148 2619 -695 19910 174 32 12 chr10 71292245 71298852 -74290436 - L1PA13 LINE L1 0 6814 1 1814 175 3 0 chr10 71299116 71299407 -74289881 + AluJb SINE Alu 1 292 -20 192 182 0 0 chr10 71299700 71299733 -74289555 - L2 LINE L2 -10 3303 3271 1009 301 63 35 chr10 71299789 71300247 -74289041 - MLT1J LTR MaLR -23 488 18 465 190 35 43 chr10 71300406 71300522 -74288766 + MIR SINE MIR 126 240 -22 355 275 130 14 chr10 71303696 71303834 -74285454 + MIR3 SINE MIR 10 163 -45 571 275 48 12 chr10 71303847 71304014 -74285274 + MER117 DNA MER1_type 18 190 -7 228 67 0 0 chr10 71305047 71305077 -74284211 + (CA)n Simple_repeat Simple_repeat 2 31 0 4580 142 66 5 chr10 71305077 71305845 -74283443 + MER6 DNA MER2_type 51 865 0 2330 168 55 25 chr10 71305865 71306336 -74282952 + Tigger1 DNA MER2_type 8 492 -1926 * 11167 120 13 9 chr10 71306320 71308032 -74281256 + Tigger1 DNA MER2_type 699 2417 -1 2511 142 28 21 chr10 71308109 71308532 -74280756 - MSTB LTR MaLR 0 426 1 6372 106 11 3 chr10 71311076 71312022 -74277266 - L1MA2 LINE L1 0 6304 5352 232 221 15 0 chr10 71312043 71312111 -74277177 - L1M4 LINE L1 -3806 2340 2272 2569 61 0 3 chr10 71312117 71312429 -74276859 - AluY SINE Alu 0 311 1 14785 157 21 16 chr10 71312429 71312910 -74276378 - L1 LINE L1 -955 6610 6133 183 100 0 0 chr10 71312910 71312940 -74276348 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 14785 157 21 16 chr10 71312940 71312983 -74276305 - L1 LINE L1 -1432 6133 6092 2172 115 7 0 chr10 71312983 71313278 -74276010 - AluSx SINE Alu -15 297 1 14785 157 21 16 chr10 71313278 71313933 -74275355 - L1 LINE L1 -1473 6092 5442 340 77 31 0 chr10 71313933 71313998 -74275290 + (TTATA)n Simple_repeat Simple_repeat 1 67 0 14785 157 21 16 chr10 71313998 71316572 -74272716 - L1 LINE L1 -2123 5442 2837 1683 135 75 18 chr10 71317092 71317250 -74272038 - AluJb SINE Alu -15 297 149 180 0 0 0 chr10 71317250 71317270 -74272018 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1683 135 75 18 chr10 71317270 71317392 -74271896 - AluJb SINE Alu -163 149 1 368 260 0 62 chr10 71317492 71317588 -74271700 - L2 LINE L2 0 3272 3183 4984 163 33 10 chr10 71318044 71318425 -74270863 + L1MB1 LINE L1 4848 5219 -949 2337 178 17 7 chr10 71318425 71318847 -74270441 - MSTB LTR MaLR 0 426 1 4984 163 33 10 chr10 71318847 71319752 -74269536 + L1MB1 LINE L1 5219 6167 -1 401 255 81 20 chr10 71320130 71320279 -74269009 - MIR SINE MIR -101 161 4 27 29 0 0 chr10 71320594 71320628 -74268660 + AT_rich Low_complexity Low_complexity 1 34 0 2462 216 65 35 chr10 71320680 71320934 -74268354 + L1ME1 LINE L1 5439 5684 -482 201 74 0 0 chr10 71320934 71320961 -74268327 + (TA)n Simple_repeat Simple_repeat 2 28 0 2462 216 65 35 chr10 71320961 71321396 -74267892 + L1ME1 LINE L1 5684 6149 -17 23 0 0 0 chr10 71321546 71321569 -74267719 + AT_rich Low_complexity Low_complexity 1 23 0 406 324 55 14 chr10 71321999 71322144 -74267144 - L2 LINE L2 -5 3267 3117 431 379 6 0 chr10 71323080 71323241 -74266047 + MIR SINE MIR 29 190 -72 191 208 208 0 chr10 71323753 71323806 -74265482 + L2 LINE L2 3250 3313 0 394 248 38 8 chr10 71325162 71325295 -74263993 + Charlie7 DNA MER1_type 53 189 -2423 1851 153 3 17 chr10 71325656 71325956 -74263332 + AluSq SINE Alu 1 296 -17 4117 170 16 17 chr10 71327027 71327868 -74261420 - L1PB2 LINE L1 -2 6149 5310 4139 202 44 17 chr10 71328063 71329139 -74260149 - Tigger1 DNA MER2_type -86 2332 1228 206 105 53 35 chr10 71329579 71329618 -74259670 + T-rich Low_complexity Low_complexity 3 45 -15 1002 221 4 4 chr10 71329618 71329844 -74259444 - L1MB1 LINE L1 -7 6161 5936 206 105 53 35 chr10 71329844 71329861 -74259427 + T-rich Low_complexity Low_complexity 45 60 0 2096 185 28 11 chr10 71329866 71330303 -74258985 - L1PB3 LINE L1 -3 6151 5708 570 314 77 4 chr10 71331905 71332117 -74257171 - MIR SINE MIR -21 241 21 792 188 162 5 chr10 71332752 71332949 -74256339 + MSTA LTR MaLR 1 228 -200 3395 197 14 0 chr10 71333616 71334190 -74255098 + L1PA13 LINE L1 1 582 -6205 3772 204 55 21 chr10 71334396 71334454 -74254834 - L1MC3 LINE L1 -188 7597 7542 1946 210 0 3 chr10 71334454 71334820 -74254468 + MLT1A1 LTR MaLR 1 365 0 3772 204 55 21 chr10 71334820 71335715 -74253573 - L1MC3 LINE L1 -243 7542 6612 680 267 17 13 chr10 71335762 71335998 -74253290 - AluSg SINE Alu -30 280 44 369 194 0 75 chr10 71336225 71336318 -74252970 - L2 LINE L2 -40 3273 3188 247 319 0 0 chr10 71336502 71336593 -74252695 + A-rich Low_complexity Low_complexity 1 91 0 660 154 8 16 chr10 71337293 71337416 -74251872 - MER50 LTR ERV1 -278 456 335 2464 265 48 24 chr10 71337418 71338455 -74250833 + L1M4 LINE L1 4330 5391 -755 691 135 0 0 chr10 71338698 71338794 -74250494 + LTR40a LTR ERVL 407 502 -17 967 106 7 13 chr10 71338795 71338946 -74250342 + L1PA15 LINE L1 6001 6150 -15 434 233 86 45 chr10 71338986 71339170 -74250118 + MLT1J2 LTR MaLR 260 409 0 3192 46 32 2 chr10 71339229 71339663 -74249625 - L1PA4 LINE L1 -3 6152 5706 1305 207 43 6 chr10 71340838 71341166 -74248122 - L1 LINE L1 -1489 4657 4318 5382 125 78 25 chr10 71341301 71342293 -74246995 + Tigger3b DNA MER2_type 187 1230 -1 240 285 0 41 chr10 71342885 71343008 -74246280 + CT-rich Low_complexity Low_complexity 3 120 0 22 0 0 0 chr10 71343821 71343843 -74245445 + AT_rich Low_complexity Low_complexity 1 22 0 2068 85 25 6 chr10 71344055 71344371 -74244917 - L1P LINE L1 -1454 4692 4371 5115 225 19 14 chr10 71344562 71345871 -74243417 + L1 LINE L1 2973 4288 -1858 4303 261 3 2 chr10 71346009 71346966 -74242322 - L1M2b LINE L1 -5705 1504 547 5147 236 30 50 chr10 71347837 71349182 -74240106 - ERVL LTR ERVL -1092 4672 3354 262 257 0 0 chr10 71349542 71349612 -74239676 + MIR SINE MIR 183 252 -10 1686 170 36 34 chr10 71350455 71350813 -74238475 + LTR19C LTR ERV1 1 359 -420 4510 275 29 28 chr10 71350920 71353900 -74235388 - L1PBb LINE L1 -2441 4408 1358 233 308 22 11 chr10 71353907 71353998 -74235290 - L1PBb LINE L1 -5285 1564 1473 230 256 61 0 chr10 71354221 71354303 -74234985 - HAL1 LINE L1 -1551 956 870 * 804 317 110 30 chr10 71354299 71354864 -74234424 - L1PBb LINE L1 -1871 1339 730 202 362 112 20 chr10 71354929 71355125 -74234163 + L2 LINE L2 1948 2161 -1153 287 327 64 0 chr10 71355145 71355255 -74234033 + MER5A DNA MER1_type 2 118 -71 2356 198 9 35 chr10 71355475 71356107 -74233181 - L1P LINE L1 -3253 2893 2278 * 4887 86 10 3 chr10 71356103 71356895 -74232393 + L1PA8A LINE L1 4689 5485 -646 1690 181 22 0 chr10 71357002 71357316 -74231972 - MER57A LTR ERV1 0 403 83 1719 135 159 73 chr10 71357316 71357686 -74231602 - MER4A LTR ERV1 0 664 263 619 117 0 48 chr10 71357686 71357789 -74231499 - MER4A LTR ERV1 -566 98 1 586 114 0 0 chr10 71357789 71357875 -74231413 - MER57A LTR ERV1 -317 86 1 2322 159 19 28 chr10 71357988 71358197 -74231091 + MER4B LTR ERV1 1 210 -400 327 65 0 0 chr10 71358197 71358243 -74231045 + (CAA)n Simple_repeat Simple_repeat 2 47 0 2322 159 19 28 chr10 71358243 71358499 -74230789 + MER4B LTR ERV1 210 462 -148 753 144 37 112 chr10 71358504 71358692 -74230596 - LTR39 LTR ERV1 -609 174 1 394 305 15 30 chr10 71358830 71359030 -74230258 - MIR SINE MIR 0 262 66 825 244 114 29 chr10 71359482 71359728 -74229560 - MSTD LTR MaLR -124 272 6 310 232 37 37 chr10 71360256 71360338 -74228950 + L2 LINE L2 3229 3310 -3 951 252 92 3 chr10 71360508 71360790 -74228498 - MER58B DNA MER1_type -34 307 1 5647 210 34 5 chr10 71361887 71361964 -74227324 + MSTA-int LTR MaLR 509 582 -1069 548 75 0 12 chr10 71361964 71362044 -74227244 + MADE1 DNA Mariner 1 79 -1 5647 210 34 5 chr10 71362044 71363076 -74226212 + MSTA-int LTR MaLR 582 1651 0 471 135 14 0 chr10 71363076 71363150 -74226138 + MSTA LTR MaLR 1 75 -353 3763 160 9 6 chr10 71363567 71364209 -74225079 - LTR5 LTR ERVK -325 644 1 247 342 61 18 chr10 71364282 71364396 -74224892 + MIR SINE MIR 23 141 -121 508 281 101 17 chr10 71364669 71364847 -74224441 - MIR SINE MIR -57 205 13 197 338 0 0 chr10 71364981 71365049 -74224239 + MIR SINE MIR 194 261 -1 3043 266 24 5 chr10 71366265 71367235 -74222053 + L1 LINE L1 2562 3549 -2597 4735 232 18 10 chr10 71367242 71368497 -74220791 + L1 LINE L1 3976 5240 -906 346 219 48 10 chr10 71368830 71368930 -74220358 + MER31-int LTR ERV1 1096 1180 -3691 297 247 0 11 chr10 71369232 71369321 -74219967 + MER31-int LTR ERV1 3354 3441 -2890 333 257 53 48 chr10 71369422 71369628 -74219660 + MER31-int LTR ERV1 1707 1913 -3023 26 0 0 0 chr10 71369651 71369677 -74219611 + AT_rich Low_complexity Low_complexity 1 26 0 253 253 38 51 chr10 71369698 71369856 -74219432 + MER31-int LTR ERV1 2780 2935 -2080 3059 133 10 12 chr10 71369950 71370448 -74218840 + MER31-int LTR ERV1 5104 5600 -1937 304 290 0 21 chr10 71370448 71370541 -74218747 + L1MC4 LINE L1 6613 6703 -1339 249 246 0 0 chr10 71370552 71370617 -74218671 + (TA)n Simple_repeat Simple_repeat 2 66 0 2608 111 54 9 chr10 71370659 71371102 -74218186 + MER57-int LTR ERV1 5620 6082 -1455 5193 250 13 6 chr10 71371268 71372261 -74217027 + L1PA15-16 LINE L1 2027 3025 -3824 186 43 0 0 chr10 71372261 71372284 -74217004 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5193 250 13 6 chr10 71372284 71372778 -74216510 + L1PA15-16 LINE L1 3025 3514 -3335 1879 181 23 25 chr10 71373232 71373629 -74215659 - MSTB1 LTR MaLR -32 400 5 2626 154 0 0 chr10 71373798 71374220 -74215068 + L1PA16 LINE L1 5583 6004 -162 8801 227 53 13 chr10 71374372 71377801 -74211487 - L1 LINE L1 -3396 4169 226 375 325 81 51 chr10 71378269 71378663 -74210625 + L2 LINE L2 2182 2587 -727 225 0 0 0 chr10 71378698 71378723 -74210565 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 1329 231 40 0 chr10 71378726 71379040 -74210248 + AluJo SINE Alu 1 325 0 4359 226 26 36 chr10 71379041 71380249 -74209039 - L1MD3 LINE L1 -17 7978 6784 4722 199 25 26 chr10 71380354 71382052 -74207236 - L1PBb LINE L1 -3738 2465 748 7294 228 25 66 chr10 71382171 71384708 -74204580 + L1 LINE L1 2931 5364 -782 376 111 16 16 chr10 71384708 71384771 -74204517 + THE1C LTR MaLR 1 63 -312 21 71 0 0 chr10 71385194 71385236 -74204052 + AT_rich Low_complexity Low_complexity 1 42 0 213 344 17 61 chr10 71385329 71385509 -74203779 + L2 LINE L2 2656 2827 -487 288 353 25 16 chr10 71385905 71386027 -74203261 - MIR3 SINE MIR -10 198 76 379 332 50 50 chr10 71386524 71386803 -74202485 - L2 LINE L2 0 3313 3035 209 348 91 59 chr10 71386803 71386990 -74202298 + MER91A DNA MER1_type 3 195 -1 8276 227 31 8 chr10 71387547 71389630 -74199658 - L1P LINE L1 -888 5258 3128 402 277 109 55 chr10 71389986 71390188 -74199100 + MLT1I LTR MaLR 197 409 0 21 71 0 0 chr10 71390335 71390377 -74198911 + AT_rich Low_complexity Low_complexity 1 42 0 246 289 6 45 chr10 71392021 71392177 -74197111 + CT-rich Low_complexity Low_complexity 2 151 0 22 0 0 0 chr10 71392317 71392339 -74196949 + AT_rich Low_complexity Low_complexity 1 22 0 642 315 48 66 chr10 71392502 71393001 -74196287 - MLT1J LTR MaLR -18 493 4 24 32 0 0 chr10 71393186 71393217 -74196071 + AT_rich Low_complexity Low_complexity 1 31 0 14277 23 0 2 chr10 71393278 71394992 -74194296 + L1P LINE L1 2709 4419 -1727 1529 221 12 53 chr10 71395257 71395687 -74193601 + L1PA16 LINE L1 5739 6150 -16 2908 214 18 18 chr10 71395709 71397008 -74192280 + L1MB1 LINE L1 4643 5946 -222 987 325 32 34 chr10 71397076 71397784 -74191504 + L1PBa LINE L1 469 1175 -5688 272 408 35 13 chr10 71398406 71398634 -74190654 + L2 LINE L2 2569 2801 -513 983 317 54 5 chr10 71398733 71399102 -74190186 - MLT1I LTR MaLR -2 407 21 706 197 0 0 chr10 71399233 71399365 -74189923 - FLAM_C SINE Alu -1 132 1 193 280 262 9 chr10 71399505 71399612 -74189676 + L2 LINE L2 3180 3313 0 255 305 12 0 chr10 71400064 71400146 -74189142 - L1ME LINE L1 -5985 85 3 227 339 45 51 chr10 71400280 71400457 -74188831 + L2 LINE L2 2135 2310 -1004 910 316 78 17 chr10 71400571 71401046 -74188242 + MLT1H LTR MaLR 44 547 -2 457 389 27 19 chr10 71401338 71401638 -74187650 + L2 LINE L2 2776 3076 -237 239 277 34 95 chr10 71401894 71402042 -74187246 + MLT1I LTR MaLR 232 370 -39 676 265 114 0 chr10 71402353 71402677 -74186611 - L1MCa LINE L1 -5018 1546 1186 2729 164 88 35 chr10 71402686 71403368 -74185920 + LTR8A LTR ERV1 10 727 0 672 263 34 80 chr10 71403377 71403432 -74185856 - L1MCa LINE L1 -5076 969 913 917 236 117 89 chr10 71403432 71403971 -74185317 + MER41C LTR ERV1 1 554 0 672 263 34 80 chr10 71403971 71404352 -74184936 - L1MCa LINE L1 -5132 913 553 535 223 41 56 chr10 71404418 71404615 -74184673 - L1MCa LINE L1 -5469 576 383 611 319 22 30 chr10 71404750 71405020 -74184268 - L1PA12 LINE L1 -5519 2062 1795 1564 242 23 93 chr10 71405029 71405685 -74183603 - L1PA12 LINE L1 -6947 634 25 2276 102 7 0 chr10 71405832 71406126 -74183162 - AluSx SINE Alu -16 296 1 187 340 158 30 chr10 71406198 71406527 -74182761 + L2 LINE L2 1314 1684 -1630 27 49 0 0 chr10 71407290 71407331 -74181957 + AT_rich Low_complexity Low_complexity 1 41 0 225 180 0 0 chr10 71407547 71407597 -74181691 + GA-rich Low_complexity Low_complexity 2 51 0 222 313 50 61 chr10 71408373 71408472 -74180816 + MER5A DNA MER1_type 64 161 -28 187 250 83 56 chr10 71408834 71408906 -74180382 + MER5A DNA MER1_type 43 116 -73 345 24 0 0 chr10 71408909 71408951 -74180337 + (CA)n Simple_repeat Simple_repeat 2 43 0 7448 212 11 25 chr10 71409846 71412033 -74177255 + L1PA13 LINE L1 1842 4014 -2783 3852 166 89 4 chr10 71412030 71413585 -74175703 + L1PA13 LINE L1 4852 6550 -264 * 1440 206 6 3 chr10 71413811 71414122 -74175166 + L1PA7 LINE L1 5828 6139 -15 261 185 0 0 chr10 71414137 71414191 -74175097 + MSTD LTR MaLR 343 396 0 5077 272 39 27 chr10 71414193 71415770 -74173518 + MSTD-int LTR MaLR 2 1596 -139 1646 191 10 10 chr10 71415779 71416067 -74173221 - AluJo SINE Alu -24 288 1 6903 33 1 1 chr10 71416081 71417582 -74171706 + L1PA3 LINE L1 4608 6107 -48 1593 249 68 6 chr10 71417775 71418397 -74170891 - L1 LINE L1 -2964 3006 2347 2087 282 72 40 chr10 71418419 71419397 -74169891 - L1 LINE L1 -4879 1012 4 2382 118 8 8 chr10 71419583 71419938 -74169350 - THE1A LTR MaLR 0 355 1 10483 108 34 17 chr10 71419938 71421491 -74167797 - THE1A-int LTR MaLR 0 1580 2 2104 150 8 11 chr10 71421491 71421843 -74167445 - THE1A LTR MaLR -2 353 1 2332 97 0 7 chr10 71422402 71422710 -74166578 + AluSx SINE Alu 1 306 -6 1339 139 205 30 chr10 71422979 71423316 -74165972 + MER4A LTR ERV1 2 397 -267 280 256 0 51 chr10 71423325 71423403 -74165885 - L2 LINE L2 -10 3303 3230 180 0 0 0 chr10 71423809 71423829 -74165459 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1728 134 0 18 chr10 71423831 71424111 -74165177 + MER4A LTR ERV1 388 463 -2 21 0 0 0 chr10 71424119 71424140 -74165148 + AT_rich Low_complexity Low_complexity 1 21 0 442 234 53 18 chr10 71424983 71425154 -74164134 + Charlie7 DNA MER1_type 548 724 -1888 2326 294 235 9 chr10 71425312 71426689 -74162599 + L2 LINE L2 4 1692 -1622 369 314 166 15 chr10 71426699 71427030 -74162258 + L1M4 LINE L1 4226 4606 -1540 1502 249 45 14 chr10 71427198 71427712 -74161576 + L1M4 LINE L1 4672 5201 -945 553 319 80 29 chr10 71427725 71428001 -74161287 + L1PA13 LINE L1 3 292 -6495 4577 226 44 21 chr10 71428454 71429901 -74159387 + L1PA13 LINE L1 1391 2942 -3855 2672 127 44 0 chr10 71429901 71430311 -74158977 - MSTA LTR MaLR 0 428 1 4577 226 44 21 chr10 71430311 71430448 -74158840 + L1PA13 LINE L1 2942 3074 -3723 29945 54 38 3 chr10 71430653 71434824 -74154464 - L1P LINE L1 -1828 4318 1 16201 203 20 20 chr10 71437967 71441211 -74148077 + L1PA12 LINE L1 239 4299 -3285 2248 150 13 11 chr10 71441211 71441584 -74147704 + THE1C LTR MaLR 1 374 -1 16201 203 20 20 chr10 71441584 71443239 -74146049 + L1PA12 LINE L1 4299 5953 -1631 6322 94 8 9 chr10 71443239 71445057 -74144231 + L1PA11 LINE L1 4341 6164 -10 5037 111 7 1 chr10 71445074 71445824 -74143464 + L1PA11 LINE L1 5413 6166 -8 231 158 0 0 chr10 71445860 71445898 -74143390 + L1M2 LINE L1 5521 5558 -742 2808 146 24 0 chr10 71446015 71446467 -74142821 + Tigger1 DNA MER2_type 153 615 -1803 521 236 102 0 chr10 71446467 71446624 -74142664 + L1M4 LINE L1 3546 3718 -2428 1360 210 106 82 chr10 71446628 71447119 -74142169 + MLT1D LTR MaLR 1 503 -2 867 189 41 8 chr10 71447181 71447424 -74141864 - L1M4 LINE L1 -2982 3164 2914 262 311 132 12 chr10 71447445 71447612 -74141676 - L2 LINE L2 -811 2503 2317 565 253 184 16 chr10 71447891 71448081 -74141207 + MIR SINE MIR 15 236 -26 321 47 0 0 chr10 71448588 71448631 -74140657 + (TG)n Simple_repeat Simple_repeat 2 44 0 274 302 121 0 chr10 71448708 71448824 -74140464 + L2 LINE L2 3184 3313 0 199 176 0 0 chr10 71449020 71449054 -74140234 - L3 LINE CR1 -21 1556 1523 * 411 320 13 39 chr10 71449024 71449177 -74140111 - MIR3 SINE MIR -29 179 31 2809 89 56 21 chr10 71450435 71450864 -74138424 - MLT2A1 LTR ERVL 0 444 1 23 0 0 0 chr10 71452401 71452424 -74136864 + AT_rich Low_complexity Low_complexity 1 23 0 2815 41 0 0 chr10 71452633 71452971 -74136317 - L1PA6 LINE L1 0 6154 5817 208 198 380 8 chr10 71454131 71454252 -74135036 + L2 LINE L2 3147 3312 -1 518 243 85 32 chr10 71454572 71454761 -74134527 - L2 LINE L2 0 3313 3115 315 197 33 0 chr10 71455614 71455675 -74133613 - L2 LINE L2 -1 3312 3250 266 309 12 12 chr10 71455948 71456032 -74133256 - MLT1K LTR MaLR -183 405 322 783 129 150 0 chr10 71456571 71456711 -74132577 - MSTA LTR MaLR 0 428 268 1362 174 228 24 chr10 71457215 71457681 -74131607 - L1MC4 LINE L1 -105 7937 7377 226 238 0 0 chr10 71457705 71457768 -74131520 - L1MC4a LINE L1 -1191 6617 6555 202 185 19 19 chr10 71458882 71458936 -74130352 + (TAA)n Simple_repeat Simple_repeat 3 56 0 789 233 68 32 chr10 71458970 71459226 -74130062 - MIR SINE MIR 0 262 9 24 85 0 0 chr10 71459268 71459327 -74129961 + AT_rich Low_complexity Low_complexity 1 59 0 1925 98 19 0 chr10 71459490 71459746 -74129542 + AluSg SINE Alu 33 293 -17 914 170 46 21 chr10 71460059 71460253 -74129035 + L1PA16 LINE L1 5968 6166 0 23 54 0 0 chr10 71460334 71460371 -74128917 + AT_rich Low_complexity Low_complexity 1 37 0 211 308 0 0 chr10 71460400 71460452 -74128836 - MER5A DNA MER1_type -1 188 137 3264 169 57 46 chr10 71460610 71461366 -74127922 - L1MA8 LINE L1 -2 6289 5526 1223 132 9 14 chr10 71461519 71461731 -74127557 - L1MB7 LINE L1 -312 5872 5662 22 35 0 0 chr10 71461807 71461836 -74127452 + AT_rich Low_complexity Low_complexity 1 29 0 235 236 0 45 chr10 71461865 71461954 -74127334 + (TTTAA)n Simple_repeat Simple_repeat 3 87 0 13182 210 27 50 chr10 71462156 71462975 -74126313 - L1PA16 LINE L1 -9 7595 6759 2620 40 0 3 chr10 71462975 71463279 -74126009 - AluY SINE Alu -6 305 3 13182 210 27 50 chr10 71463279 71467310 -74121978 - L1PA16 LINE L1 -845 6759 2858 21 36 0 0 chr10 71467406 71467434 -74121854 + AT_rich Low_complexity Low_complexity 1 28 0 3765 155 46 59 chr10 71468266 71469079 -74120209 - L1MA8 LINE L1 -5 6286 5473 5148 123 16 6 chr10 71469080 71469792 -74119496 - L1PA12 LINE L1 -2 6166 5475 189 0 0 0 chr10 71469792 71469813 -74119475 + (TTG)n Simple_repeat Simple_repeat 1 21 0 5148 123 16 6 chr10 71469813 71470213 -74119075 - L1PA12 LINE L1 -693 5475 5080 1548 210 7 7 chr10 71470385 71470675 -74118613 - L1PA16 LINE L1 -7290 291 2 2192 279 21 13 chr10 71470682 71471387 -74117901 - L1PA12 LINE L1 -4689 2892 2182 277 410 35 30 chr10 71471547 71471779 -74117509 - L1PA12 LINE L1 -6544 1030 798 591 214 38 45 chr10 71471818 71472015 -74117273 - MLT1A1 LTR MaLR -28 429 133 1782 36 0 5 chr10 71472957 71473178 -74116110 + L1PA4 LINE L1 5932 6151 -4 391 155 0 0 chr10 71473833 71473891 -74115397 + Tigger2 DNA MER2_type 2 59 -2659 2152 150 92 31 chr10 71473899 71474082 -74115206 + Tigger2 DNA MER2_type 2280 2451 -267 2717 84 5 16 chr10 71474082 71474461 -74114827 - THE1C LTR MaLR 0 375 1 10340 100 34 37 chr10 71474461 71476046 -74113242 - THE1C-int LTR MaLR 0 1580 1 2511 77 44 11 chr10 71476046 71476409 -74112879 - THE1C LTR MaLR 0 375 1 2152 150 92 31 chr10 71476409 71476637 -74112651 + Tigger2 DNA MER2_type 2450 2718 0 21 82 0 0 chr10 71477095 71477144 -74112144 + AT_rich Low_complexity Low_complexity 1 49 0 251 225 171 27 chr10 71477201 71477312 -74111976 + MIR SINE MIR 63 189 -73 3428 252 51 35 chr10 71478844 71479908 -74109380 - ERVL LTR ERVL -238 5526 4446 388 301 18 0 chr10 71479898 71480011 -74109277 - ERVL LTR ERVL -1494 4270 4156 * 10660 27 2 0 chr10 71480031 71482076 -74107212 - L1PA3 LINE L1 0 6155 4108 774 139 0 0 chr10 71482201 71482316 -74106972 - Tigger1 DNA MER2_type -2303 115 1 185 191 0 21 chr10 71482440 71482487 -74106801 + (TAAA)n Simple_repeat Simple_repeat 3 48 0 612 259 44 48 chr10 71482889 71483117 -74106171 + MIR SINE MIR 20 246 -16 318 314 36 58 chr10 71483432 71483569 -74105719 - MIR3 SINE MIR -10 198 65 6414 166 7 1 chr10 71484053 71486203 -74103085 + L1PB1 LINE L1 3980 6142 -9 35 0 0 0 chr10 71486230 71486265 -74103023 + AT_rich Low_complexity Low_complexity 1 35 0 25 31 0 0 chr10 71486647 71486679 -74102609 + AT_rich Low_complexity Low_complexity 1 32 0 369 310 43 9 chr10 71486999 71487115 -74102173 + L2 LINE L2 3189 3308 -5 20861 158 34 30 chr10 71487198 71487975 -74101313 + L1M1 LINE L1 9 782 -6783 2557 138 16 19 chr10 71487975 71488404 -74100884 - MSTA LTR MaLR 0 428 1 20861 158 34 30 chr10 71488404 71491525 -74097763 + L1M1 LINE L1 782 3933 -3632 7653 32 0 0 chr10 71491525 71492699 -74096589 - L1PA3 LINE L1 0 6155 4982 20861 158 34 30 chr10 71492699 71493888 -74095400 + L1M1 LINE L1 3933 5116 -2449 1195 145 102 14 chr10 71493885 71494168 -74095120 + L1M1 LINE L1 3355 3662 -3903 * 986 144 6 56 chr10 71494210 71494390 -74094898 - MSTD LTR MaLR -225 171 1 208 248 331 30 chr10 71494562 71494695 -74094593 + L2 LINE L2 3124 3296 -17 195 254 0 85 chr10 71494799 71494858 -74094430 - L2 LINE L2 -86 3186 3133 210 342 26 0 chr10 71494900 71494976 -74094312 + L2 LINE L2 200 277 -3037 886 287 82 33 chr10 71495049 71495232 -74094056 + L2 LINE L2 2644 2817 -496 3507 148 63 6 chr10 71495232 71495554 -74093734 + MER67C LTR ERV1 1 303 -407 2459 69 0 0 chr10 71495554 71495860 -74093428 + AluY SINE Alu 1 306 -5 3507 148 63 6 chr10 71495860 71496207 -74093081 + MER67C LTR ERV1 303 708 -2 886 287 82 33 chr10 71496207 71496641 -74092647 + L2 LINE L2 2817 3313 0 332 243 61 0 chr10 71496972 71497115 -74092173 + L1ME1 LINE L1 4498 4659 -1487 180 0 0 0 chr10 71497277 71497297 -74091991 + (TGAA)n Simple_repeat Simple_repeat 2 21 0 8932 224 23 11 chr10 71497676 71500095 -74089193 + L1 LINE L1 2350 4796 -1350 8083 68 34 0 chr10 71500081 71501192 -74088096 + L1PA6 LINE L1 3089 4148 -2006 * 8083 70 23 2 chr10 71501192 71503047 -74086241 + L1PA6 LINE L1 4280 6154 0 1714 105 4 0 chr10 71503095 71503333 -74085955 + AluSq SINE Alu 61 299 -14 4663 165 48 54 chr10 71503333 71503553 -74085735 + L1PA16 LINE L1 4790 5010 -1156 251 139 47 0 chr10 71503553 71503596 -74085692 + MLT1A2 LTR MaLR 284 328 -46 4663 165 48 54 chr10 71503596 71504722 -74084566 + L1PA16 LINE L1 5010 6154 -12 3226 223 57 26 chr10 71504757 71505682 -74083606 + L1ME1 LINE L1 5193 6125 -41 401 264 0 0 chr10 71505690 71505777 -74083511 + FLAM_A SINE Alu 34 120 -22 1576 264 86 47 chr10 71505859 71506705 -74082583 + L1MC4a LINE L1 4797 5186 -960 276 100 0 0 chr10 71506705 71506745 -74082543 + (TATG)n Simple_repeat Simple_repeat 3 42 0 1576 264 86 47 chr10 71506745 71506913 -74082375 + L1MC4a LINE L1 5186 5346 -800 2670 20 0 0 chr10 71507537 71507842 -74081446 - AluYa5 SINE Alu -6 305 1 5355 44 3 1 chr10 71507909 71508568 -74080720 - L1PA5 LINE L1 -3 6151 5492 441 305 52 52 chr10 71508569 71508956 -74080332 + L1MC4a LINE L1 5511 5897 -1911 4078 130 15 5 chr10 71509196 71509858 -74079430 + L1PA16 LINE L1 5489 6157 -9 7108 34 5 0 chr10 71509899 71511078 -74078210 - L1PA2 LINE L1 0 6155 4986 9770 43 2 1 chr10 71511078 71512302 -74076986 + L1P LINE L1 1407 2632 -3514 402 253 67 11 chr10 71512325 71512503 -74076785 + L1MC4a LINE L1 5852 6039 -1769 302 215 17 134 chr10 71512554 71512726 -74076562 + L2 LINE L2 3152 3303 -10 1314 202 0 0 chr10 71512799 71513022 -74076266 - MER58A DNA MER1_type -1 223 1 189 107 0 0 chr10 71513113 71513141 -74076147 + (TAAA)n Simple_repeat Simple_repeat 3 30 0 431 117 0 0 chr10 71513290 71513367 -74075921 - L1MA3 LINE L1 0 6305 6229 424 304 22 22 chr10 71513367 71513502 -74075786 - L2 LINE L2 -273 3040 2906 306 246 43 14 chr10 71513803 71513872 -74075416 + MIR SINE MIR 20 90 -118 486 188 227 58 chr10 71513929 71514006 -74075282 + MER20 DNA MER1_type 40 103 -116 1927 115 34 24 chr10 71514006 71514301 -74074987 + AluSx SINE Alu 1 298 -14 486 188 227 58 chr10 71514301 71514377 -74074911 + MER20 DNA MER1_type 103 219 0 1727 203 21 4 chr10 71514531 71514860 -74074428 + MLT1A1 LTR MaLR 24 365 0 1694 134 11 11 chr10 71516323 71516607 -74072681 - L1MA5A LINE L1 -6 6291 6008 697 138 18 0 chr10 71516607 71516716 -74072572 - FRAM SINE Alu -55 121 11 530 115 42 0 chr10 71516727 71516823 -74072465 - L1MA5A LINE L1 -244 6053 5954 1299 192 8 96 chr10 71516920 71517305 -74071983 - L1MD3 LINE L1 0 7995 7645 948 87 17 87 chr10 71517311 71517484 -74071804 - L1MA5A LINE L1 -366 5931 5771 316 313 106 40 chr10 71517907 71518105 -74071183 + MIR SINE MIR 6 216 -46 2759 13 0 0 chr10 71518422 71518729 -74070559 + AluYa5 SINE Alu 1 307 -4 201 267 200 0 chr10 71519941 71520001 -74069287 - MIR SINE MIR -70 138 67 1948 192 70 8 chr10 71521324 71521725 -74067563 - MSTB LTR MaLR 0 426 1 458 320 117 5 chr10 71521981 71522187 -74067101 - MIR SINE MIR -22 240 12 996 85 0 0 chr10 71622500 71622629 -73966659 - AluSc SINE Alu -180 129 1 2105 114 0 0 chr10 71623207 71623504 -73965784 - AluSq SINE Alu -14 299 3 738 193 7 7 chr10 71623515 71623655 -73965633 - AluSg/x SINE Alu -16 296 157 21 36 0 0 chr10 71624319 71624347 -73964941 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr10 71624390 71624414 -73964874 + AT_rich Low_complexity Low_complexity 1 24 0 449 169 65 0 chr10 71624945 71625022 -73964266 - MER5A DNA MER1_type -107 82 1 817 182 121 71 chr10 71625037 71625235 -73964053 + AluJo SINE Alu 2 209 -103 1888 119 11 0 chr10 71625273 71625558 -73963730 + AluSc SINE Alu 1 288 -21 241 224 0 0 chr10 71625712 71625761 -73963527 + L2 LINE L2 3229 3277 -36 3273 159 29 63 chr10 71625762 71626429 -73962859 - LTR8 LTR ERV1 0 691 48 218 182 55 18 chr10 71626541 71626596 -73962692 + L2 LINE L2 1754 1810 -1504 2096 96 0 4 chr10 71626598 71626903 -73962385 - AluSg SINE Alu 0 304 1 1593 123 77 43 chr10 71626908 71627208 -73962080 - AluJo SINE Alu -2 310 1 1259 187 49 0 chr10 71627324 71627591 -73961697 - AluJb SINE Alu -8 304 25 1809 74 0 0 chr10 71627699 71627928 -73961360 - AluY SINE Alu -81 230 2 643 240 46 29 chr10 71629752 71629927 -73959361 + MER5B DNA MER1_type 1 178 0 1230 109 8 96 chr10 71630759 71630998 -73958290 + L1MC1 LINE L1 6116 6333 0 386 226 288 34 chr10 71631253 71631399 -73957889 - MER5A DNA MER1_type 0 189 7 364 231 46 37 chr10 71631416 71631524 -73957764 + MIR SINE MIR 27 135 -127 1896 125 36 0 chr10 71632324 71632604 -73956684 + AluSx SINE Alu 1 290 -22 1812 135 17 14 chr10 71632666 71632962 -73956326 - AluJb SINE Alu -13 299 3 2005 119 3 0 chr10 71633641 71633935 -73955353 + AluSp SINE Alu 1 295 -18 611 185 109 8 chr10 71633947 71634066 -73955222 + FLAM_C SINE Alu 3 133 0 811 158 0 7 chr10 71634080 71634219 -73955069 - AluSg/x SINE Alu -17 293 156 1809 102 0 4 chr10 71634319 71634574 -73954714 + AluSx SINE Alu 47 300 -12 237 186 0 23 chr10 71636276 71636319 -73952969 + MIR SINE MIR 221 262 0 21 95 0 0 chr10 71639115 71639178 -73950110 + GC_rich Low_complexity Low_complexity 1 63 0 254 133 22 22 chr10 71639347 71639392 -73949896 - AluSp SINE Alu -121 182 138 22 35 0 0 chr10 71639405 71639434 -73949854 + AT_rich Low_complexity Low_complexity 1 29 0 254 260 74 107 chr10 71639434 71639652 -73949636 - L1ME4a LINE L1 -6 6115 5912 2185 95 7 0 chr10 71639652 71639947 -73949341 - AluSc SINE Alu -12 297 1 254 260 74 107 chr10 71639947 71640094 -73949194 - L1ME4a LINE L1 -209 5912 5762 27 29 0 0 chr10 71640101 71640135 -73949153 + AT_rich Low_complexity Low_complexity 1 34 0 698 161 8 24 chr10 71640137 71640261 -73949027 - FLAM_A SINE Alu -11 122 1 337 265 11 81 chr10 71640264 71640295 -73948993 - L1ME4a LINE L1 -366 5755 5723 1743 174 13 7 chr10 71640295 71640605 -73948683 - AluJo SINE Alu 0 312 1 337 265 11 81 chr10 71640605 71640758 -73948530 - L1ME4a LINE L1 -398 5723 5584 284 236 103 34 chr10 71640793 71640929 -73948359 - L1M2 LINE L1 -694 5462 5327 2063 114 0 10 chr10 71640943 71641241 -73948047 - AluSx SINE Alu -17 295 1 2605 45 0 0 chr10 71641252 71641560 -73947728 - AluY SINE Alu -3 308 1 349 144 0 2 chr10 71642400 71642461 -73946827 - Alu SINE Alu -250 52 1 1884 202 50 22 chr10 71642744 71642923 -73946365 + MSTB LTR MaLR 3 176 -250 2085 130 0 0 chr10 71642923 71643222 -73946066 + AluSx SINE Alu 1 299 -13 1884 202 50 22 chr10 71643222 71643443 -73945845 + MSTB LTR MaLR 176 414 -12 601 193 14 64 chr10 71644458 71644598 -73944690 + FLAM_A SINE Alu 1 133 0 2126 107 0 16 chr10 71645514 71645824 -73943464 - AluSx SINE Alu -7 305 1 1719 112 6 96 chr10 71647144 71647466 -73941822 + AluSg SINE Alu 1 293 -17 377 233 0 68 chr10 71648264 71648343 -73940945 + Charlie1 DNA MER1_type 1 73 -2688 2191 113 3 0 chr10 71648343 71648654 -73940634 - AluSq SINE Alu -1 312 1 377 233 0 68 chr10 71648654 71648677 -73940611 + Charlie1 DNA MER1_type 73 96 -2665 1773 227 195 15 chr10 71648720 71649076 -73940212 + Charlie1 DNA MER1_type 86 377 -2384 1248 179 101 30 chr10 71649076 71649344 -73939944 + AluJo SINE Alu 1 287 -15 1773 227 195 15 chr10 71649344 71649823 -73939465 + Charlie1 DNA MER1_type 377 768 -1993 2140 129 3 0 chr10 71649823 71650118 -73939170 - AluSx SINE Alu -12 300 5 1773 227 195 15 chr10 71650118 71650132 -73939156 + Charlie1 DNA MER1_type 768 778 -1983 2191 117 0 0 chr10 71650132 71650431 -73938857 - AluY SINE Alu -12 299 1 1773 227 195 15 chr10 71650431 71650597 -73938691 + Charlie1 DNA MER1_type 778 2580 -181 729 250 6 0 chr10 71650613 71650769 -73938519 + MER20 DNA MER1_type 60 216 -3 676 258 0 0 chr10 71651391 71651550 -73937738 - FRAM SINE Alu -6 160 2 1246 81 0 0 chr10 71651579 71651728 -73937560 - AluSp SINE Alu -35 278 130 275 195 78 109 chr10 71651877 71652005 -73937283 - MIR3 SINE MIR -1 207 84 689 193 0 0 chr10 71652125 71652265 -73937023 + L1M3 LINE L1 5302 5441 -727 341 21 0 21 chr10 71653432 71653479 -73935809 + (TG)n Simple_repeat Simple_repeat 2 47 0 381 22 0 0 chr10 71654106 71654152 -73935136 + (TG)n Simple_repeat Simple_repeat 2 47 0 258 328 17 8 chr10 71654188 71654307 -73934981 - 5S rRNA rRNA 0 121 2 443 288 15 8 chr10 71654569 71654701 -73934587 - L1MC1 LINE L1 0 6333 6201 1635 203 25 34 chr10 71654701 71655056 -73934232 - MER93b LTR ERV1 -17 356 5 1237 179 4 61 chr10 71655082 71655344 -73933944 - AluJb SINE Alu -45 267 21 282 264 39 23 chr10 71655826 71655955 -73933333 + MIR SINE MIR 96 226 -36 1547 128 54 70 chr10 71656811 71657109 -73932179 + AluJb SINE Alu 1 293 -19 182 176 29 0 chr10 71657287 71657321 -73931967 + L2 LINE L2 3185 3219 -94 465 298 147 9 chr10 71658148 71658366 -73930922 + MIR SINE MIR 2 249 -13 653 214 174 0 chr10 71659181 71659359 -73929929 + MER3 DNA MER1_type 1 209 0 26 0 0 0 chr10 71659410 71659436 -73929852 + AT_rich Low_complexity Low_complexity 1 26 0 2737 35 0 13 chr10 71659548 71659863 -73929425 + AluY SINE Alu 1 311 0 183 299 39 13 chr10 71660113 71660190 -73929098 - L2 LINE L2 0 3313 3235 208 337 34 0 chr10 71660357 71660446 -73928842 + MIR SINE MIR 24 115 -93 1726 162 50 23 chr10 71661012 71661315 -73927973 + AluSx SINE Alu 1 311 -1 183 159 333 0 chr10 71661528 71661597 -73927691 + MER5C DNA MER1_type 33 124 -200 2105 156 0 0 chr10 71661727 71662035 -73927253 + AluSx SINE Alu 3 310 -2 1298 140 8 62 chr10 71662035 71662079 -73927209 - PABL_A-int LTR ERV1 -4036 979 934 2017 103 43 27 chr10 71662079 71662379 -73926909 + AluSq SINE Alu 1 305 -8 1298 140 8 62 chr10 71662379 71662577 -73926711 - PABL_A-int LTR ERV1 -4081 934 750 616 144 0 0 chr10 71662571 71662661 -73926627 - pTR5 LTR ERV1 -2046 392 303 * 276 278 11 0 chr10 71662663 71662753 -73926535 - LTR30 LTR ERV1 -79 643 553 253 163 0 0 chr10 71662758 71662801 -73926487 - pTR5 LTR ERV1 -409 2029 1987 2003 130 49 0 chr10 71662821 71663105 -73926183 + AluSx SINE Alu 1 298 -14 229 230 149 11 chr10 71663302 71663389 -73925899 - MIR SINE MIR -57 205 107 2468 55 0 23 chr10 71663467 71663776 -73925512 - AluY SINE Alu -9 302 1 1114 158 0 0 chr10 71664023 71664187 -73925101 - AluSg/x SINE Alu -17 295 132 183 42 0 0 chr10 71664306 71664330 -73924958 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2142 112 30 7 chr10 71664519 71664823 -73924465 + AluSx SINE Alu 1 311 -1 37 39 0 0 chr10 71665111 71665162 -73924126 + AT_rich Low_complexity Low_complexity 1 51 0 1581 150 80 3 chr10 71666178 71666478 -73922810 - L1MA4 LINE L1 -10 6290 5968 488 251 72 18 chr10 71666669 71666836 -73922452 - L1MC4a LINE L1 -1884 5924 5749 1091 196 40 0 chr10 71667854 71668053 -73921235 - MER58A DNA MER1_type -16 208 2 1902 150 14 3 chr10 71668358 71668652 -73920636 + AluSx SINE Alu 1 297 -15 1844 149 0 37 chr10 71671133 71671456 -73917832 - AluJo SINE Alu -1 311 1 1149 244 79 5 chr10 71671571 71671965 -73917323 - L1MC4 LINE L1 -799 7243 6821 5097 68 11 17 chr10 71673830 71674494 -73914794 + SVA Other Other 727 1386 0 656 167 9 0 chr10 71674495 71674603 -73914685 + MER65A LTR ERV1 172 280 -165 1492 203 0 14 chr10 71676555 71676846 -73912442 + AluJo SINE Alu 2 288 -24 2296 94 10 3 chr10 71676961 71677260 -73912028 - AluSc SINE Alu -8 301 1 707 196 8 8 chr10 71678536 71678669 -73910619 - FLAM_A SINE Alu 0 133 1 310 68 17 17 chr10 71678731 71678790 -73910498 + (TG)n Simple_repeat Simple_repeat 2 60 0 1203 225 96 61 chr10 71678801 71679176 -73910112 - MLT1D LTR MaLR 0 593 116 1445 214 73 3 chr10 71679176 71679517 -73909771 - MLT1A1 LTR MaLR 0 365 1 1203 225 96 61 chr10 71679517 71679638 -73909650 - MLT1D LTR MaLR -477 116 1 180 111 0 0 chr10 71679696 71679723 -73909565 + (TA)n Simple_repeat Simple_repeat 1 27 0 2157 103 3 45 chr10 71680084 71680395 -73908893 + AluSx SINE Alu 1 298 -14 2219 118 0 0 chr10 71680412 71680701 -73908587 + AluSp SINE Alu 1 289 -24 1231 168 54 0 chr10 71680802 71681005 -73908283 - AluJo SINE Alu -98 214 1 721 175 8 8 chr10 71681036 71681162 -73908126 + FLAM_C SINE Alu 2 127 -16 23 33 0 0 chr10 71681162 71681192 -73908096 + AT_rich Low_complexity Low_complexity 1 30 0 180 0 0 0 chr10 71682701 71682721 -73906567 + (TG)n Simple_repeat Simple_repeat 1 20 0 1318 168 20 81 chr10 71682721 71683018 -73906270 - AluJo SINE Alu -33 279 1 2308 91 0 19 chr10 71689008 71689316 -73899972 - AluSx SINE Alu -10 302 1 2395 90 3 0 chr10 71691431 71691732 -73897556 + AluY SINE Alu 1 302 -9 185 346 79 14 chr10 71691838 71692052 -73897236 + L2 LINE L2 1533 1760 -1554 198 296 56 0 chr10 71692123 71692194 -73897094 - L2 LINE L2 -43 3229 3155 188 211 0 0 chr10 71693188 71693226 -73896062 + MIR SINE MIR 216 253 -9 1990 128 26 20 chr10 71693276 71693581 -73895707 + AluSx SINE Alu 4 310 -2 1911 85 115 7 chr10 71693604 71693874 -73895414 + AluSc SINE Alu 1 299 -10 368 204 9 65 chr10 71693879 71693987 -73895301 + L1 LINE L1 4282 4383 -1763 231 100 0 0 chr10 71693987 71694041 -73895247 + AluSp/q SINE Alu 256 309 0 1797 167 34 58 chr10 71694087 71694252 -73895036 + THE1C LTR MaLR 1 168 -207 1985 162 0 0 chr10 71694252 71694556 -73894732 - AluSx SINE Alu 0 304 1 1797 167 34 58 chr10 71694556 71694767 -73894521 + THE1C LTR MaLR 168 369 -6 362 247 187 6 chr10 71694808 71694974 -73894314 + MIR SINE MIR 40 235 -27 21 0 0 0 chr10 71695933 71695954 -73893334 + GC_rich Low_complexity Low_complexity 1 21 0 498 118 0 0 chr10 71697253 71697329 -73891959 - AluS SINE Alu -233 77 2 3302 195 19 16 chr10 71698427 71698476 -73890812 - L1 LINE L1 -1685 4461 4414 201 39 0 0 chr10 71698476 71698502 -73890786 + (TTTTA)n Simple_repeat Simple_repeat 2 27 0 3302 195 19 16 chr10 71698502 71699123 -73890165 - L1 LINE L1 -1732 4414 3786 2333 84 0 7 chr10 71699123 71699420 -73889868 - AluSg SINE Alu -15 295 1 3302 195 19 16 chr10 71699420 71699446 -73889842 - L1 LINE L1 -2360 3786 3762 3557 210 23 6 chr10 71699447 71700275 -73889013 + L1 LINE L1 4459 5300 -846 2674 102 9 25 chr10 71700275 71700704 -73888584 + L1PB1 LINE L1 5709 6150 -1 3557 210 23 6 chr10 71700704 71700715 -73888573 + L1 LINE L1 5300 5309 -837 1274 158 5 23 chr10 71700827 71701042 -73888246 - AluJo SINE Alu -15 297 87 595 319 213 35 chr10 71701359 71702101 -73887187 + HAL1 LINE L1 91 964 -1543 303 264 34 43 chr10 71702109 71702317 -73886971 + HAL1 LINE L1 1088 1293 -1214 362 250 128 32 chr10 71702336 71702492 -73886796 + HAL1 LINE L1 1367 1537 -970 5754 80 20 55 chr10 71702528 71703420 -73885868 + SVA Other Other 6 866 -520 2933 51 27 5 chr10 71703449 71703822 -73885466 + SVA Other Other 635 1015 -371 1526 67 0 0 chr10 71703924 71704104 -73885184 + AluSp SINE Alu 121 300 -13 255 31 0 0 chr10 71704701 71704733 -73884555 + (CA)n Simple_repeat Simple_repeat 1 32 0 31 76 0 0 chr10 71705169 71705235 -73884053 + GC_rich Low_complexity Low_complexity 1 66 0 1579 200 118 9 chr10 71705937 71706387 -73882901 - Charlie4a DNA MER1_type -8 500 2 2504 61 7 0 chr10 71706389 71706683 -73882605 + AluY SINE Alu 1 296 -15 393 291 21 90 chr10 71706888 71706984 -73882304 - Charlie8 DNA MER1_type -2198 219 118 2256 114 0 0 chr10 71706984 71707281 -73882007 + AluSx SINE Alu 1 297 -15 393 291 21 90 chr10 71707281 71707418 -73881870 - Charlie8 DNA MER1_type -2299 118 2 246 309 50 29 chr10 71708318 71708457 -73880831 - MIR SINE MIR -41 221 80 1851 138 32 3 chr10 71709654 71709936 -73879352 - AluJo SINE Alu -22 290 1 334 225 146 7 chr10 71709980 71710131 -73879157 + MARNA DNA Mariner 376 547 -39 621 247 272 7 chr10 71710142 71710425 -73878863 + L2 LINE L2 2956 3313 0 1589 190 23 7 chr10 71710426 71710726 -73878562 - AluJo SINE Alu -7 305 1 2339 101 3 0 chr10 71711468 71711766 -73877522 - AluSp SINE Alu -14 299 1 790 186 93 6 chr10 71711773 71711934 -73877354 - FAM SINE Alu 0 175 1 180 0 0 0 chr10 71711953 71711973 -73877315 + (T)n Simple_repeat Simple_repeat 1 20 0 1338 145 5 10 chr10 71711991 71712191 -73877097 - AluJb SINE Alu -113 199 1 201 196 20 0 chr10 71712400 71712451 -73876837 + (TA)n Simple_repeat Simple_repeat 2 53 0 572 84 12 0 chr10 71712635 71712718 -73876570 - AluY SINE Alu -9 302 219 783 279 5 14 chr10 71713188 71713410 -73875878 + AluJo SINE Alu 1 220 -92 461 214 20 0 chr10 71713641 71713739 -73875549 - LTR49-int LTR ERV1 -2884 3447 3348 1008 177 0 28 chr10 71713839 71714020 -73875268 + AluJb SINE Alu 120 295 -17 237 339 218 24 chr10 71714172 71714553 -73874735 - L2 LINE L2 -5 3308 2854 472 183 54 0 chr10 71714561 71714654 -73874634 + LTR47B LTR ERVL 5 102 -341 2327 102 7 0 chr10 71714662 71714965 -73874323 - AluSx SINE Alu -7 305 1 1327 154 28 28 chr10 71714966 71715213 -73874075 + LTR47A LTR ERVL 206 452 0 2947 147 20 56 chr10 71715217 71715823 -73873465 + L1MB2 LINE L1 5586 6169 -2 2154 128 10 3 chr10 71715828 71716134 -73873154 - AluSx SINE Alu -4 308 1 2350 98 3 13 chr10 71716146 71716461 -73872827 - AluSp SINE Alu -1 312 1 2172 125 7 0 chr10 71716461 71716764 -73872524 - AluSp SINE Alu -8 305 1 1623 230 45 30 chr10 71716777 71717268 -73872020 + L1MC4a LINE L1 7160 7657 -151 81 66 0 0 chr10 71717273 71717424 -73871864 + AT_rich Low_complexity Low_complexity 1 151 0 296 305 42 0 chr10 71717427 71717522 -73871766 + L1MD3 LINE L1 7840 7938 -57 240 35 0 0 chr10 71718149 71718178 -73871110 + (TCC)n Simple_repeat Simple_repeat 2 30 0 2184 116 0 0 chr10 71718245 71718569 -73870719 + AluSq SINE Alu 1 324 0 1059 269 196 0 chr10 71718623 71719046 -73870242 + LTR33 LTR ERVL 15 520 -1 286 143 0 18 chr10 71720611 71720667 -73868621 + MER69 DNA AcHobo 2444 2498 -28 263 56 0 0 chr10 71721189 71721225 -73868063 - MIR SINE MIR -114 148 113 2296 126 0 0 chr10 71722627 71722936 -73866352 - AluSx SINE Alu -3 309 1 2464 60 27 0 chr10 71723149 71723484 -73865804 + LTR14A LTR ERVK 1 344 0 1406 218 0 10 chr10 71723821 71724119 -73865169 + AluSg SINE Alu 16 310 0 27 108 0 0 chr10 71725056 71725167 -73864121 + GC_rich Low_complexity Low_complexity 1 111 0 792 189 70 53 chr10 71725314 71725542 -73863746 + MIR SINE MIR 13 244 -18 2262 115 3 3 chr10 71725713 71726025 -73863263 - AluSx SINE Alu 0 312 1 1430 175 4 19 chr10 71726206 71726463 -73862825 + AluJo SINE Alu 42 294 -18 226 88 0 29 chr10 71730662 71730715 -73858573 - Alu SINE Alu 0 302 256 1885 145 13 35 chr10 71730906 71731082 -73858206 - AluSx SINE Alu -1 311 133 2084 116 17 10 chr10 71731082 71731384 -73857904 - AluSg1 SINE Alu -5 304 1 2398 106 3 0 chr10 71731388 71731691 -73857597 - AluSp SINE Alu -9 304 1 1885 145 13 35 chr10 71731691 71731827 -73857461 - AluSx SINE Alu -182 130 1 2181 108 10 0 chr10 71731836 71732167 -73857121 - AluSx SINE Alu 0 312 1 2309 106 3 3 chr10 71732167 71732468 -73856820 - AluSq SINE Alu -12 301 1 2334 111 3 3 chr10 71732468 71732775 -73856513 - AluSq SINE Alu -6 307 1 2538 94 0 0 chr10 71733266 71733574 -73855714 - AluSg SINE Alu -2 308 1 1886 122 48 4 chr10 71735011 71735310 -73853978 + AluSx SINE Alu 1 311 0 203 236 11 56 chr10 71735357 71735446 -73853842 + T-rich Low_complexity Low_complexity 1 85 0 1945 165 0 7 chr10 71735853 71736156 -73853132 - AluJo SINE Alu -11 301 1 838 205 6 6 chr10 71736410 71736576 -73852712 + FRAM SINE Alu 1 166 0 237 256 18 98 chr10 71736590 71736754 -73852534 - L1ME3A LINE L1 -51 6119 5969 2174 129 0 7 chr10 71736781 71737084 -73852204 - AluSx SINE Alu -11 301 1 1550 165 24 17 chr10 71737120 71737411 -73851877 + AluJo SINE Alu 1 293 -19 339 206 72 31 chr10 71737480 71737577 -73851711 - L1MC5 LINE L1 -451 7510 7410 556 116 9 45 chr10 71737581 71737598 -73851690 - MER2 DNA MER2_type -150 195 179 1235 106 111 24 chr10 71737598 71737806 -73851482 - MER30 DNA MER1_type -4 226 1 556 116 9 45 chr10 71737806 71737865 -73851423 - MER2 DNA MER2_type -166 179 122 2368 105 0 0 chr10 71737865 71738159 -73851129 + AluSx SINE Alu 1 294 -18 556 116 9 45 chr10 71738159 71738193 -73851095 - MER2 DNA MER2_type -223 122 88 523 128 0 75 chr10 71738250 71738344 -73850944 + MER2 DNA MER2_type 1 87 -258 1565 253 58 17 chr10 71738348 71738584 -73850704 - L2 LINE L2 -997 2317 2092 2057 155 3 0 chr10 71738584 71738893 -73850395 + AluSx SINE Alu 1 310 -2 1565 253 58 17 chr10 71738893 71739118 -73850170 - L2 LINE L2 -1222 2092 1837 2475 67 0 7 chr10 71739128 71739425 -73849863 + AluY SINE Alu 1 295 -16 625 262 60 87 chr10 71739437 71739588 -73849700 + L1MEd LINE L1 23 176 -5943 2285 112 0 0 chr10 71739588 71739884 -73849404 - AluSx SINE Alu -16 296 1 625 262 60 87 chr10 71739884 71740148 -73849140 + L1MEd LINE L1 176 427 -5692 232 239 0 0 chr10 71741733 71741779 -73847509 + CT-rich Low_complexity Low_complexity 1 46 0 203 297 231 0 chr10 71744280 71744371 -73844917 - MIR SINE MIR -29 233 122 2488 77 0 6 chr10 71744374 71744687 -73844601 + AluY SINE Alu 1 311 0 901 223 99 75 chr10 71744691 71745007 -73844281 + L2 LINE L2 2961 3287 -26 1217 117 226 32 chr10 71745007 71745255 -73844033 - AluSg SINE Alu -4 296 1 901 223 99 75 chr10 71745255 71745283 -73844005 + L2 LINE L2 3287 3313 0 181 328 15 30 chr10 71745315 71745382 -73843906 - MIR SINE MIR -189 73 8 592 223 7 29 chr10 71746290 71746429 -73842859 + MIR SINE MIR 47 182 -80 458 336 150 0 chr10 71746623 71746843 -73842445 + MIR SINE MIR 6 258 -4 455 201 149 22 chr10 71747348 71747482 -73841806 + MIR SINE MIR 112 262 0 208 217 0 0 chr10 71747490 71747536 -73841752 + (CAT)n Simple_repeat Simple_repeat 3 48 0 278 290 32 11 chr10 71747541 71747634 -73841654 + MIR SINE MIR 168 262 0 2542 71 0 0 chr10 71747661 71747956 -73841332 + AluSx SINE Alu 1 295 -17 269 193 92 82 chr10 71747995 71748124 -73841164 + MIR SINE MIR 17 164 -91 825 169 101 0 chr10 71748127 71748275 -73841013 + FRAM SINE Alu 2 164 -12 526 246 123 78 chr10 71749850 71750134 -73839154 + MER102b DNA MER1_type 44 340 -1 950 201 0 18 chr10 71750260 71750479 -73838809 - L1MB8 LINE L1 -243 5935 5721 198 0 0 0 chr10 71750481 71750503 -73838785 + (TG)n Simple_repeat Simple_repeat 1 22 0 211 156 89 0 chr10 71750511 71750556 -73838732 - L2 LINE L2 -1636 1678 1630 1537 191 0 0 chr10 71750577 71750839 -73838449 + AluJb SINE Alu 35 296 -16 288 0 0 0 chr10 71755297 71755329 -73833959 + (T)n Simple_repeat Simple_repeat 1 32 0 2460 59 0 0 chr10 71755872 71756175 -73833113 + AluY SINE Alu 1 303 -8 2083 139 3 0 chr10 71759015 71759324 -73829964 + AluSx SINE Alu 1 310 -2 2065 107 24 0 chr10 71759730 71760019 -73829269 + AluSx SINE Alu 1 296 -16 2070 104 16 19 chr10 71760324 71760632 -73828656 - AluSx SINE Alu -5 307 1 267 248 9 16 chr10 71760706 71760803 -73828485 + MER5B DNA MER1_type 1 189 0 1893 96 66 0 chr10 71765071 71765343 -73823945 - AluSx SINE Alu -22 290 1 183 182 0 0 chr10 71766307 71766340 -73822948 + MIR SINE MIR 117 149 -113 2072 107 47 7 chr10 71768611 71768911 -73820377 - AluJo SINE Alu 0 312 1 2069 113 0 16 chr10 71769007 71769316 -73819972 - AluJb SINE Alu -8 304 1 1638 168 3 54 chr10 71769870 71770186 -73819102 - AluJo SINE Alu -12 300 1 519 330 178 21 chr10 71771467 71772032 -73817256 - L2 LINE L2 -2 3270 2615 2185 99 0 0 chr10 71774132 71774425 -73814863 - AluSx SINE Alu -19 293 1 182 245 41 0 chr10 71774548 71774597 -73814691 - L2 LINE L2 -19 3294 3244 29 28 0 0 chr10 71777103 71777139 -73812149 + AT_rich Low_complexity Low_complexity 1 36 0 1988 100 0 0 chr10 71777259 71777520 -73811768 - AluSg SINE Alu -49 261 1 21 0 0 0 chr10 71778269 71778290 -73810998 + AT_rich Low_complexity Low_complexity 1 21 0 1031 163 12 0 chr10 71778339 71778505 -73810783 + AluJb SINE Alu 134 301 -11 306 0 0 0 chr10 71779043 71779077 -73810211 + (CA)n Simple_repeat Simple_repeat 2 35 0 2004 82 3 21 chr10 71779178 71779460 -73809828 + AluSx SINE Alu 1 277 -35 423 0 0 0 chr10 71779464 71779511 -73809777 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 895 272 179 8 chr10 71779732 71780118 -73809170 - Tigger8 DNA MER2_type -53 613 162 205 271 0 0 chr10 71780591 71780639 -73808649 + CT-rich Low_complexity Low_complexity 2 49 0 2308 56 24 0 chr10 71781299 71781587 -73807701 + AluY SINE Alu 1 295 -16 2319 91 0 7 chr10 71782314 71782623 -73806665 - AluSx SINE Alu -1 311 5 268 171 61 61 chr10 71784952 71785034 -73804254 + MIR SINE MIR 111 192 -70 939 287 106 53 chr10 71785131 71785262 -73804026 - L2 LINE L2 -21 3292 3169 1839 154 3 3 chr10 71785262 71785568 -73803720 + AluSx SINE Alu 1 306 -6 939 287 106 53 chr10 71785568 71785616 -73803672 - L2 LINE L2 -144 3169 3125 2213 113 0 0 chr10 71785616 71785918 -73803370 + AluSx SINE Alu 1 302 -10 939 287 106 53 chr10 71785918 71786312 -73802976 - L2 LINE L2 -188 3125 2753 2201 99 0 0 chr10 71786312 71786605 -73802683 + AluSq SINE Alu 3 295 -18 939 287 106 53 chr10 71786605 71786908 -73802380 - L2 LINE L2 -560 2753 2361 801 153 7 15 chr10 71787518 71787655 -73801633 + AluJo SINE Alu 2 137 -175 2275 92 0 10 chr10 71787668 71787803 -73801485 + AluSx SINE Alu 1 136 -176 2342 87 0 6 chr10 71787803 71788114 -73801174 + AluSq SINE Alu 1 309 -4 2275 92 0 10 chr10 71788114 71788284 -73801004 + AluSx SINE Alu 136 303 -9 282 29 0 0 chr10 71788284 71788319 -73800969 + (TA)n Simple_repeat Simple_repeat 2 36 0 237 222 0 0 chr10 71788319 71788364 -73800924 + MER81 DNA DNA 70 114 0 255 61 0 0 chr10 71789090 71789123 -73800165 + (CCCTG)n Simple_repeat Simple_repeat 1 33 0 419 276 116 25 chr10 71789647 71789846 -73799442 + MIR SINE MIR 8 224 -38 2363 64 3 0 chr10 71792020 71792315 -73796973 + AluY SINE Alu 2 297 -14 185 182 152 0 chr10 71793169 71793235 -73796053 + MIR SINE MIR 79 154 -108 565 338 48 13 chr10 71793898 71794126 -73795162 + MIR SINE MIR 3 238 -24 2334 60 0 10 chr10 71796397 71796695 -73792593 + AluSg SINE Alu 16 310 0 673 248 66 35 chr10 71797243 71797469 -73791819 + MIR SINE MIR 28 260 -2 732 180 8 0 chr10 71797499 71797627 -73791661 + FLAM_A SINE Alu 4 132 -1 214 127 0 73 chr10 71798002 71798057 -73791231 + (GGGTG)n Simple_repeat Simple_repeat 2 52 0 475 287 60 12 chr10 71799452 71799619 -73789669 + MIR SINE MIR 13 187 -75 393 259 71 18 chr10 71799613 71799725 -73789563 + L2 LINE L2 3194 3311 -2 * 242 200 53 40 chr10 71799716 71799791 -73789497 + MIR SINE MIR 187 262 0 * 1939 118 4 7 chr10 71801523 71801802 -73787486 + AluSx SINE Alu 3 280 -32 1111 175 13 74 chr10 71802952 71803181 -73786107 - MER20 DNA MER1_type -4 215 1 1931 146 7 3 chr10 71803274 71803576 -73785712 + AluJb SINE Alu 1 303 -9 285 310 52 26 chr10 71804011 71804127 -73785161 + MIR3 SINE MIR 86 204 -4 225 317 0 50 chr10 71805917 71806018 -73783270 + MIR3 SINE MIR 107 202 -6 352 335 69 57 chr10 71806942 71807187 -73782101 - L2 LINE L2 0 3272 3025 332 319 110 87 chr10 71807382 71807487 -73781801 - L2 LINE L2 -529 2785 2684 1071 179 12 0 chr10 71807487 71807660 -73781628 + FAM SINE Alu 1 175 0 332 319 110 87 chr10 71807660 71807968 -73781320 - L2 LINE L2 -630 2684 2353 2431 57 17 0 chr10 71807968 71808268 -73781020 - AluY SINE Alu -6 305 1 332 319 110 87 chr10 71808268 71808415 -73780873 - L2 LINE L2 -961 2353 2211 1855 138 3 3 chr10 71808874 71809157 -73780131 + AluSx SINE Alu 14 296 -16 1647 169 30 24 chr10 71809178 71809473 -73779815 + AluJb SINE Alu 1 297 -15 1808 134 35 10 chr10 71810203 71810493 -73778795 + AluSx SINE Alu 1 297 -15 197 281 240 10 chr10 71810611 71810707 -73778581 + L2 LINE L2 3194 3311 -2 302 258 133 33 chr10 71814479 71814599 -73774689 + MIR SINE MIR 21 152 -110 566 251 36 24 chr10 71814633 71814800 -73774488 + MER5B DNA MER1_type 5 173 -5 911 239 33 5 chr10 71815035 71815248 -73774040 - MIR SINE MIR -11 251 33 2137 120 3 0 chr10 71817435 71817744 -73771544 + AluSx SINE Alu 1 310 -2 1551 160 34 20 chr10 71817977 71818271 -73771017 + AluJo SINE Alu 1 298 -14 3992 217 25 13 chr10 71918644 71919589 -73669699 - L1P LINE L1 -1065 5081 4125 4266 204 48 16 chr10 71919773 71920805 -73668483 + L1P LINE L1 1491 2554 -3592 336 314 45 41 chr10 71921475 71921695 -73667593 - MIR SINE MIR -32 230 10 1271 106 0 21 chr10 71921775 71921963 -73667325 + AluSx SINE Alu 5 188 -124 459 258 0 0 chr10 71922654 71922809 -73666479 + (TCCA)n Simple_repeat Simple_repeat 2 156 0 238 254 98 49 chr10 71922809 71922931 -73666357 - L2 LINE L2 0 3272 3145 395 216 186 0 chr10 71923152 71923254 -73666034 - MIR SINE MIR -121 141 21 195 250 33 0 chr10 71923295 71923355 -73665933 + L2 LINE L2 3227 3288 -25 471 326 21 0 chr10 71923577 71923718 -73665570 - MIR SINE MIR -46 216 73 350 257 224 7 chr10 71924291 71924443 -73664845 + MIR SINE MIR 56 240 -22 437 136 0 12 chr10 71925779 71925860 -73663428 + (TCCC)n Simple_repeat Simple_repeat 1 80 0 353 286 8 0 chr10 71926309 71926428 -73662860 - HAL1 LINE L1 -147 2360 2241 2319 99 0 0 chr10 71926667 71926970 -73662318 - AluSx SINE Alu -9 303 1 12379 55 0 1 chr10 71928190 71929748 -73659540 + L1P LINE L1 1197 2752 -3394 560 184 19 107 chr10 71929881 71930087 -73659201 + L1 LINE L1 5158 5345 -801 2249 96 3 3 chr10 71930087 71930380 -73658908 - AluSq SINE Alu -17 296 4 9240 102 8 8 chr10 71930400 71932479 -73656809 - L1PA6 LINE L1 0 6154 4076 189 74 0 0 chr10 71933298 71933325 -73655963 + (G)n Simple_repeat Simple_repeat 1 27 0 5977 33 37 1 chr10 71933343 71934279 -73655009 - L1PA4 LINE L1 -142 6013 5045 307 179 0 0 chr10 71934297 71934353 -73654935 + L1MC4 LINE L1 6648 6703 -1339 2233 107 18 0 chr10 71934367 71934693 -73654595 - L1P5 LINE L1 -364 5792 5461 570 157 17 0 chr10 71934733 71934848 -73654440 - L1 LINE L1 -1439 4707 4591 1953 165 0 3 chr10 71935217 71935514 -73653774 - AluJb SINE Alu -7 305 10 458 223 83 0 chr10 71935907 71936028 -73653260 + LTR16A1 LTR ERVL 178 308 -149 1374 137 57 135 chr10 71936028 71936450 -73652838 - Charlie5 DNA MER1_type 0 2624 2236 539 229 34 0 chr10 71936454 71936572 -73652716 - Charlie5 DNA MER1_type -2489 123 2 540 210 32 0 chr10 71936590 71936714 -73652574 + LTR16A1 LTR ERVL 324 451 -6 296 367 0 0 chr10 71937068 71937147 -73652141 + MIR SINE MIR 58 136 -72 205 200 0 0 chr10 71937185 71937225 -73652063 + (TTA)n Simple_repeat Simple_repeat 1 40 0 714 266 74 31 chr10 71937595 71937851 -73651437 + MLT1I LTR MaLR 143 409 0 2940 174 55 8 chr10 71938914 71939401 -73649887 + L1MA10 LINE L1 5658 6189 -145 360 0 0 0 chr10 71939401 71939441 -73649847 + (CA)n Simple_repeat Simple_repeat 1 40 0 2940 174 55 8 chr10 71939441 71939595 -73649693 + L1MA10 LINE L1 6189 6334 0 1902 203 8 21 chr10 71939669 71940048 -73649240 + L1PA12 LINE L1 9 382 -7199 815 207 10 35 chr10 71940215 71940413 -73648875 - L1M4 LINE L1 -1456 4690 4498 305 181 42 0 chr10 71940418 71940490 -73648798 - L1M4 LINE L1 -1695 4451 4377 451 257 140 35 chr10 71940503 71940845 -73648443 - L1ME LINE L1 -5114 956 579 374 330 33 60 chr10 71941104 71941558 -73647730 - L1ME LINE L1 -5539 531 90 2457 298 45 30 chr10 71941567 71942342 -73646946 + L1PA12 LINE L1 788 1574 -6000 2037 204 39 46 chr10 71942340 71942893 -73646395 + L1PA12 LINE L1 2023 2582 -4999 * 232 218 18 0 chr10 71943131 71943186 -73646102 - L1P5 LINE L1 -315 5836 5781 5889 215 22 49 chr10 71943194 71944480 -73644808 - L1PA15-16 LINE L1 -2973 3876 2714 958 93 78 0 chr10 71944480 71944609 -73644679 + MER85 DNA T2_type 1 139 0 5889 215 22 49 chr10 71944609 71945476 -73643812 - L1PA15-16 LINE L1 -4135 2714 1825 1816 91 0 25 chr10 71945645 71945886 -73643402 - AluSg SINE Alu -75 235 1 1210 163 32 0 chr10 71945887 71946133 -73643155 - L1 LINE L1 -2657 3489 3236 2163 104 0 14 chr10 71948673 71948970 -73640318 - AluY SINE Alu -5 306 14 2521 65 0 0 chr10 71948984 71949278 -73640010 - AluY SINE Alu -17 294 1 11398 93 6 3 chr10 71949729 71951265 -73638023 + L1P3 LINE L1 8 1547 -4914 8609 56 1 7 chr10 71951397 71952474 -73636814 - L1P LINE L1 -5067 1079 9 513 282 7 7 chr10 71953202 71953351 -73635937 + LTR67 LTR ERVL 409 557 0 18050 54 3 5 chr10 71953870 71956253 -73633035 + L1P LINE L1 2797 5174 -972 2170 230 107 58 chr10 71956775 71957993 -73631295 + L1ME3A LINE L1 4753 6160 -10 1919 144 0 51 chr10 71958035 71958390 -73630898 - MER1B DNA MER1_type 0 337 1 240 274 0 0 chr10 71959789 71959840 -73629448 - L2 LINE L2 -1 3271 3221 285 367 86 7 chr10 71959964 71960103 -73629185 - L2 LINE L2 -177 3095 2946 787 201 8 0 chr10 71960105 71960239 -73629049 + Tigger3(Golem) DNA MER2_type 3 137 -2892 4799 109 69 25 chr10 71960258 71961072 -73628216 + Tigger3(Golem) DNA MER2_type 2179 3028 -1 240 307 60 85 chr10 71961082 71961365 -73627923 - L2 LINE L2 -374 2940 2665 494 101 112 0 chr10 71961454 71961543 -73627745 + L1PA15 LINE L1 6054 6152 -13 3153 185 55 22 chr10 71961792 71962485 -73626803 + L1MA9 LINE L1 5557 6272 -40 26 52 0 17 chr10 71962486 71962526 -73626762 + AT_rich Low_complexity Low_complexity 1 41 -16 2205 94 28 0 chr10 71962526 71962812 -73626476 - AluSq SINE Alu -19 294 1 26 52 0 17 chr10 71962812 71962829 -73626459 + AT_rich Low_complexity Low_complexity 41 57 0 2457 145 25 31 chr10 71963980 71964429 -73624859 - Tigger2 DNA MER2_type 0 2718 2273 419 143 0 14 chr10 71964419 71964489 -73624799 - Tigger2 DNA MER2_type -2649 69 1 * 526 214 202 36 chr10 71964695 71964943 -73624345 - L2 LINE L2 -15 3298 3010 217 286 152 9 chr10 71964935 71965047 -73624241 - L2 LINE L2 -423 2891 2764 * 5661 206 10 4 chr10 71965177 71966364 -73622924 + L1PA16 LINE L1 3389 4582 -1564 3343 140 4 0 chr10 71966364 71966881 -73622407 + L1PA16 LINE L1 5643 6164 -2 321 271 30 124 chr10 71966980 71967202 -73622086 - L1MCa LINE L1 -909 1667 1433 510 211 51 150 chr10 71967319 71967797 -73621491 - LTR27 LTR ERV1 -12 894 238 360 289 86 26 chr10 71967806 71968223 -73621065 - L1MCa LINE L1 -4846 1369 894 327 277 50 35 chr10 71968262 71968403 -73620885 - L1MCa LINE L1 -5469 927 785 902 218 79 85 chr10 71968613 71969302 -73619986 + L1ME LINE L1 4966 5641 -521 223 336 200 0 chr10 71970304 71970414 -73618874 - L2 LINE L2 -15 3257 3126 394 271 50 29 chr10 71970639 71970779 -73618509 - L2 LINE L2 -12 3301 3159 6877 188 43 17 chr10 71971096 71972336 -73616952 + L1M2 LINE L1 1341 2547 -4301 1471 196 46 4 chr10 71972336 71972454 -73616834 + AluJb SINE Alu 1 112 -200 441 0 0 0 chr10 71972454 71972503 -73616785 + (CA)n Simple_repeat Simple_repeat 2 50 0 1471 196 46 4 chr10 71972503 71972664 -73616624 + AluJb SINE Alu 112 292 -20 6877 188 43 17 chr10 71972664 71974484 -73614804 + L1M2 LINE L1 2547 4484 -2364 8405 133 12 7 chr10 71974504 71975779 -73613509 + L1P LINE L1 11 1292 -4854 235 298 269 0 chr10 71976528 71976632 -73612656 - L2 LINE L2 -8 3264 3133 310 281 144 7 chr10 71976653 71976792 -73612496 - MIR SINE MIR -7 255 98 2528 30 23 0 chr10 71977444 71977743 -73611545 + AluY SINE Alu 1 306 -5 285 314 44 27 chr10 71979773 71979942 -73609346 + MIR SINE MIR 22 192 -70 254 276 171 29 chr10 71979955 71980060 -73609228 - L2 LINE L2 -3 3269 3150 220 241 17 17 chr10 71980168 71980226 -73609062 - L2 LINE L2 -6 3307 3250 7085 117 12 20 chr10 71980230 71980298 -73608990 + HSMAR2 DNA Mariner 212 279 -1023 2101 124 3 0 chr10 71980298 71980609 -73608679 + AluSx SINE Alu 1 312 0 7085 117 12 20 chr10 71980609 71981638 -73607650 + HSMAR2 DNA Mariner 279 1301 -1 218 361 35 35 chr10 71981639 71981808 -73607480 + L2 LINE L2 2722 2890 -424 275 271 83 77 chr10 71981946 71982127 -73607161 + L2 LINE L2 3122 3303 -10 1503 128 11 11 chr10 71982217 71982483 -73606805 + L1MA8 LINE L1 6014 6279 -12 1477 160 14 7 chr10 71982487 71982769 -73606519 + L1MA4 LINE L1 6007 6290 -10 1641 58 10 0 chr10 71982769 71982974 -73606314 + L1PA3 LINE L1 5941 6148 -7 261 0 0 0 chr10 71982979 71983008 -73606280 + (TAAAA)n Simple_repeat Simple_repeat 3 31 0 2505 106 8 19 chr10 71983129 71983497 -73605791 + THE1B LTR MaLR 1 364 0 11685 92 5 4 chr10 71983497 71985075 -73604213 + THE1B-int LTR MaLR 1 1580 0 1929 111 8 93 chr10 71985075 71985428 -73603860 + THE1B LTR MaLR 1 323 -41 31194 56 1 1 chr10 71985588 71990382 -73598906 + L1PA5 LINE L1 1350 6143 -11 441 129 0 0 chr10 71990385 71990455 -73598833 + (TA)n Simple_repeat Simple_repeat 1 70 0 4810 176 12 1 chr10 71990455 71991365 -73597923 + L1PB4 LINE L1 3786 4705 -1441 2109 122 18 0 chr10 71991407 71991736 -73597552 + L1PB4 LINE L1 5461 5795 -361 306 227 0 0 chr10 71991736 71991811 -73597477 + (TA)n Simple_repeat Simple_repeat 1 75 0 7608 29 1 0 chr10 71991812 71992919 -73596369 + L1PA3 LINE L1 5045 6152 -3 1399 241 15 0 chr10 71992999 71993335 -73595953 + L1PB4 LINE L1 5814 6154 -2 204 188 0 0 chr10 71994192 71994224 -73595064 + (TG)n Simple_repeat Simple_repeat 2 33 0 186 270 0 0 chr10 71994252 71994315 -73594973 + (CATATA)n Simple_repeat Simple_repeat 6 68 0 597 300 50 25 chr10 71998667 71998899 -73590389 - MIR SINE MIR -13 249 16 389 280 9 28 chr10 71999169 71999276 -73590012 + L2 LINE L2 3193 3297 -16 21 36 0 0 chr10 72000338 72000366 -73588922 + AT_rich Low_complexity Low_complexity 1 28 0 202 353 0 49 chr10 72000925 72001027 -73588261 + L2 LINE L2 3182 3278 -35 307 128 0 0 chr10 72001543 72001590 -73587698 - L1MA9 LINE L1 -794 5497 5451 3394 174 25 6 chr10 72001591 72002300 -73586988 + L1MA9 LINE L1 5479 6298 -14 180 313 36 48 chr10 72002475 72002558 -73586730 + L3b LINE CR1 1213 1294 -289 1479 129 0 5 chr10 72002682 72002899 -73586389 + AluSq SINE Alu 82 297 -16 194 62 15 92 chr10 72004130 72004195 -73585093 + (CAAAAA)n Simple_repeat Simple_repeat 1 60 0 356 0 0 0 chr10 72004301 72004346 -73584942 + L1PA4 LINE L1 6110 6154 -1 379 306 0 67 chr10 72004510 72004541 -73584747 - MIR3 SINE MIR -31 177 145 1885 142 40 3 chr10 72004541 72004837 -73584451 - AluSg SINE Alu -3 307 1 379 306 0 67 chr10 72004837 72004939 -73584349 - MIR3 SINE MIR -63 145 53 22 23 0 45 chr10 72005839 72005866 -73583422 + AT_rich Low_complexity Low_complexity 1 27 -15 2141 115 3 0 chr10 72005866 72006161 -73583127 - AluSc SINE Alu -13 296 1 22 23 0 45 chr10 72006161 72006177 -73583111 + AT_rich Low_complexity Low_complexity 27 42 0 2437 124 14 38 chr10 72006370 72006797 -73582491 - L1M2 LINE L1 -561 5751 5335 7569 58 2 4 chr10 72006797 72007776 -73581512 + L1P LINE L1 3279 4255 -1891 807 141 63 21 chr10 72007882 72008024 -73581264 - THE1C LTR MaLR -227 148 1 25 0 0 0 chr10 72009536 72009561 -73579727 + AT_rich Low_complexity Low_complexity 1 25 0 318 136 25 123 chr10 72011680 72011761 -73577527 - MLT1K LTR MaLR -325 263 191 433 315 19 69 chr10 72011880 72012019 -73577269 + MIR SINE MIR 45 171 -91 2087 129 3 3 chr10 72012019 72012328 -73576960 - AluSx SINE Alu -3 309 1 433 315 19 69 chr10 72012328 72012404 -73576884 + MIR SINE MIR 171 249 -13 698 259 21 47 chr10 72012836 72013029 -73576259 - MER58A DNA MER1_type -35 189 2 192 77 0 0 chr10 72014535 72014561 -73574727 + (GGAAA)n Simple_repeat Simple_repeat 5 30 0 976 187 0 0 chr10 72016114 72016280 -73573008 + FRAM SINE Alu 1 166 0 1858 165 7 0 chr10 72016811 72017133 -73572155 - AluJo SINE Alu 0 312 1 1225 112 34 29 chr10 72017146 72017352 -73571936 - L1PA13 LINE L1 0 6163 5957 691 202 0 16 chr10 72017370 72017499 -73571789 + FLAM_A SINE Alu 1 127 -6 25 31 0 0 chr10 72017515 72017547 -73571741 + AT_rich Low_complexity Low_complexity 1 32 0 485 244 145 87 chr10 72017685 72018029 -73571259 + MLT1J2 LTR MaLR 75 438 -12 2577 62 0 9 chr10 72018555 72018895 -73570393 + L1PA7 LINE L1 5818 6154 0 4873 74 1 1 chr10 72018923 72019569 -73569719 - L1MA2 LINE L1 0 6304 5659 234 0 0 0 chr10 72019766 72019792 -73569496 + (CA)n Simple_repeat Simple_repeat 2 27 0 1724 164 0 38 chr10 72019899 72020082 -73569206 - AluJb SINE Alu -7 305 138 249 57 0 0 chr10 72020082 72020117 -73569171 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1724 164 0 38 chr10 72020117 72020250 -73569038 - AluJb SINE Alu -174 138 1 806 198 22 50 chr10 72020271 72020453 -73568835 - MER20 DNA MER1_type -42 177 1 204 250 0 0 chr10 72020928 72020972 -73568316 - L2 LINE L2 -15 3298 3255 2026 196 17 46 chr10 72021475 72021954 -73567334 + MER41B LTR ERV1 132 596 -39 683 244 67 25 chr10 72022739 72022969 -73566319 - MER2 DNA MER2_type 0 345 106 1863 136 44 25 chr10 72022969 72023286 -73566002 + LTR24 LTR ERV1 1 323 -144 565 100 12 12 chr10 72023293 72023373 -73565915 - MER2 DNA MER2_type -237 108 29 * 1667 176 29 49 chr10 72023362 72023708 -73565580 + MLT1B LTR MaLR 52 390 0 3587 213 33 20 chr10 72023715 72024569 -73564719 + L1ME1 LINE L1 5313 6334 0 24 0 0 0 chr10 72024685 72024709 -73564579 + AT_rich Low_complexity Low_complexity 1 24 0 459 183 8 75 chr10 72025285 72025405 -73563883 + L1PA15-16 LINE L1 905 1016 -5833 20501 51 3 0 chr10 72025537 72028933 -73560355 + L1PA5 LINE L1 2754 6152 -2 24 53 0 0 chr10 72029387 72029425 -73559863 + AT_rich Low_complexity Low_complexity 1 38 0 2555 90 14 0 chr10 72029772 72030126 -73559162 + L1PA11 LINE L1 5749 6107 -67 571 144 9 36 chr10 72030132 72030243 -73559045 + LTR1 LTR ERV1 145 252 -533 428 34 85 0 chr10 72030278 72030337 -73558951 + L1PA11 LINE L1 6110 6173 -1 2790 118 67 3 chr10 72030920 72031438 -73557850 - LTR1 LTR ERV1 0 785 203 815 202 47 31 chr10 72031451 72031708 -73557580 - LTR1 LTR ERV1 -499 286 26 33 94 0 0 chr10 72032019 72032115 -73557173 + AT_rich Low_complexity Low_complexity 1 96 0 1486 184 45 27 chr10 72032723 72033054 -73556234 - MER58B DNA MER1_type -1 340 4 22 0 0 0 chr10 72033566 72033588 -73555700 + AT_rich Low_complexity Low_complexity 1 22 0 2477 201 243 19 chr10 72033628 72034271 -73555017 - L1M2 LINE L1 -750 5396 4898 2601 140 31 5 chr10 72034271 72034685 -73554603 - MSTB LTR MaLR -1 425 1 2477 201 243 19 chr10 72034685 72034911 -73554377 - L1M2 LINE L1 -1248 4898 4369 1603 189 7 3 chr10 72036247 72036532 -73552756 + AluJo SINE Alu 7 292 -20 21 57 0 0 chr10 72037194 72037229 -73552059 + AT_rich Low_complexity Low_complexity 1 35 0 22 56 0 0 chr10 72037479 72037515 -73551773 + AT_rich Low_complexity Low_complexity 1 36 0 694 35 0 0 chr10 72037515 72037600 -73551688 + L1PA5 LINE L1 6067 6151 -3 2540 234 21 21 chr10 72037833 72038462 -73550826 - L1MEc LINE L1 -5728 668 40 194 370 74 42 chr10 72039949 72040165 -73549123 + L2 LINE L2 3050 3272 0 328 406 36 48 chr10 72040203 72040452 -73548836 - L2 LINE L2 -19 3253 3008 461 321 118 5 chr10 72040973 72041194 -73548094 - MIR SINE MIR 0 262 17 22 0 0 0 chr10 72041291 72041313 -73547975 + AT_rich Low_complexity Low_complexity 1 22 0 668 223 117 37 chr10 72041385 72041658 -73547630 + L1ME LINE L1 5508 5802 -319 392 254 201 18 chr10 72041663 72041832 -73547456 - MIR SINE MIR -61 201 2 356 258 24 8 chr10 72042002 72042126 -73547162 + (TA)n Simple_repeat Simple_repeat 2 127 0 25 0 0 0 chr10 72042430 72042455 -73546833 + AT_rich Low_complexity Low_complexity 1 25 0 227 176 27 40 chr10 72043455 72043529 -73545759 + (TAAA)n Simple_repeat Simple_repeat 4 76 0 2004 117 9 29 chr10 72044063 72044379 -73544909 - AluSg SINE Alu 0 310 1 207 0 0 0 chr10 72044492 72044515 -73544773 + (T)n Simple_repeat Simple_repeat 1 23 0 543 271 123 0 chr10 72045210 72045365 -73543923 - MIR SINE MIR 0 262 89 481 245 0 0 chr10 72045920 72046022 -73543266 - MER103 DNA DNA -64 102 1 628 344 60 44 chr10 72046123 72046576 -73542712 - L3 LINE CR1 -2 1575 1116 1068 331 179 22 chr10 72046922 72047663 -73541625 - L3 LINE CR1 -424 1153 296 631 117 138 0 chr10 72049322 72049467 -73539821 - AluSq SINE Alu -13 300 136 227 229 219 10 chr10 72049596 72049692 -73539596 - MLT1I LTR MaLR -293 116 1 639 148 0 39 chr10 72050566 72050694 -73538594 - LTR49 LTR ERV1 0 595 473 4001 212 61 47 chr10 72050719 72052377 -73536911 - LTR49-int LTR ERV1 -1484 4847 1690 2180 200 30 63 chr10 72052605 72053155 -73536133 - LTR49-int LTR ERV1 -177 1609 1344 888 265 9 14 chr10 72053143 72053366 -73535922 - LTR49-int LTR ERV1 -4231 2100 1879 * 1044 119 50 100 chr10 72053409 72053669 -73535619 - LTR49-int LTR ERV1 -4797 1534 1288 1804 145 30 17 chr10 72053683 72053980 -73535308 - AluJo SINE Alu -11 301 1 352 265 0 0 chr10 72054046 72054114 -73535174 - tRNA-Glu-GAG tRNA tRNA 0 75 8 415 246 27 9 chr10 72054130 72054240 -73535048 - LTR48B-int LTR ERV1 -5136 1195 1084 4189 160 73 58 chr10 72054332 72055233 -73534055 - LTR48B-int LTR ERV1 -5416 915 1 1733 228 74 10 chr10 72055235 72055723 -73533565 - LTR48B LTR ERV1 0 644 126 2254 79 3 20 chr10 72055760 72056052 -73533236 + AluSp SINE Alu 1 287 -26 243 250 0 0 chr10 72056059 72056115 -73533173 - MER34 LTR ERV1 -486 56 1 930 215 10 15 chr10 72057841 72058041 -73531247 - MER58A DNA MER1_type 0 224 26 2281 116 0 3 chr10 72058100 72058410 -73530878 - AluSg SINE Alu -1 309 1 891 157 39 0 chr10 72058630 72058783 -73530505 + MER5B DNA MER1_type 1 159 -19 310 235 0 0 chr10 72058933 72059001 -73530287 - L1MC4 LINE L1 -1339 6703 6636 2063 135 3 0 chr10 72060349 72060696 -73528592 - L1 LINE L1 -1093 5053 4706 5002 103 16 11 chr10 72061985 72062771 -73526517 + L1PA13 LINE L1 5372 6161 -2 244 337 60 0 chr10 72062893 72062976 -73526312 + L2 LINE L2 2112 2199 -1115 1213 292 160 61 chr10 72063080 72063914 -73525374 + L2 LINE L2 2242 3196 -117 2327 110 0 3 chr10 72063914 72064223 -73525065 + AluSx SINE Alu 1 308 -4 1213 292 160 61 chr10 72064223 72064355 -73524933 + L2 LINE L2 3196 3313 0 1782 131 14 58 chr10 72064754 72065112 -73524176 + MLT1B LTR MaLR 1 342 -48 2716 90 48 64 chr10 72065112 72065568 -73523720 + MER1A DNA MER1_type 1 449 -80 248 189 0 19 chr10 72065568 72065621 -73523667 + LTR30 LTR ERV1 1 52 -670 2208 127 81 1 chr10 72065621 72065998 -73523290 + LTR12 LTR ERV1 100 480 -234 437 153 0 14 chr10 72066012 72066084 -73523204 + MER1A DNA MER1_type 453 523 -6 425 98 0 0 chr10 72066085 72066146 -73523142 + MLT1B LTR MaLR 330 390 0 192 321 57 28 chr10 72066568 72066674 -73522614 - L2 LINE L2 -85 3228 3120 182 206 110 41 chr10 72067803 72067876 -73521412 - L2 LINE L2 -2787 527 450 2418 60 0 10 chr10 72068262 72068560 -73520728 + AluY SINE Alu 1 295 -16 26 0 0 0 chr10 72068724 72068750 -73520538 + AT_rich Low_complexity Low_complexity 1 26 0 2363 89 3 0 chr10 72070767 72071069 -73518219 - AluSp SINE Alu -10 303 1 612 149 35 21 chr10 72071203 72071344 -73517944 - L1MA9 LINE L1 0 6312 6170 11125 207 35 21 chr10 72071515 72075532 -73513756 + L1PA16 LINE L1 733 4423 -2426 2459 139 57 55 chr10 72075532 72076042 -73513246 + MER9 LTR ERVK 1 511 0 11125 207 35 21 chr10 72076042 72076814 -73512474 + L1PA16 LINE L1 4423 5183 -1666 10524 25 1 0 chr10 72076806 72078111 -73511177 - L1PA3 LINE L1 -868 5278 3972 * 7170 25 11 0 chr10 72078111 72078950 -73510338 + L1PA3 LINE L1 5301 6152 -3 22 35 0 0 chr10 72078950 72078979 -73510309 + AT_rich Low_complexity Low_complexity 1 29 0 5442 117 4 49 chr10 72078979 72080702 -73508586 + L1PA16 LINE L1 5166 6869 0 410 267 42 30 chr10 72081710 72081875 -73507413 + MIR SINE MIR 91 256 -6 308 344 77 26 chr10 72081911 72082106 -73507182 - L3b LINE CR1 -255 1328 1124 2273 107 0 3 chr10 72083552 72083852 -73505436 - AluSq SINE Alu -14 299 1 1582 126 5 0 chr10 72083854 72084069 -73505219 - AluSg/x SINE Alu -14 298 83 1067 130 0 0 chr10 72084069 72084215 -73505073 - AluSq/x SINE Alu -165 148 3 33 43 0 0 chr10 72084915 72084962 -73504326 + AT_rich Low_complexity Low_complexity 1 47 0 191 188 21 0 chr10 72084970 72085018 -73504270 + (TA)n Simple_repeat Simple_repeat 2 50 0 205 189 0 0 chr10 72085030 72085067 -73504221 - L2 LINE L2 -957 2357 2321 328 204 0 0 chr10 72085074 72085150 -73504138 - L1MA9 LINE L1 -347 5950 5875 27 0 0 0 chr10 72085578 72085605 -73503683 + AT_rich Low_complexity Low_complexity 1 27 0 278 357 163 40 chr10 72086444 72087015 -73502273 - L2 LINE L2 -5 3267 2623 24 77 0 0 chr10 72087071 72087123 -73502165 + AT_rich Low_complexity Low_complexity 1 52 0 213 309 41 31 chr10 72087133 72087230 -73502058 - L2 LINE L2 -991 2323 2226 191 182 0 0 chr10 72087652 72087685 -73501603 - L2 LINE L2 0 3313 3281 430 304 74 0 chr10 72087792 72087940 -73501348 - L2 LINE L2 -221 3092 2934 2373 64 3 3 chr10 72088462 72088759 -73500529 + AluY SINE Alu 1 297 -14 220 329 0 43 chr10 72089761 72089831 -73499457 + MIR SINE MIR 41 107 -155 804 137 49 27 chr10 72090079 72090262 -73499026 - MER53 DNA DNA -2 187 1 27053 89 4 8 chr10 72092126 72097038 -73492250 - L1PA7 LINE L1 -13 6456 1573 9946 119 17 4 chr10 72197043 72199376 -73389912 + L1PA10 LINE L1 3815 6168 0 5257 146 17 47 chr10 72199380 72199810 -73389478 + L1MA4 LINE L1 4946 5388 -912 1524 179 48 31 chr10 72199810 72200101 -73389187 + AluJo SINE Alu 1 296 -16 5257 146 17 47 chr10 72200101 72200414 -73388874 + L1MA4 LINE L1 5388 5709 -591 2264 125 0 3 chr10 72200414 72200725 -73388563 + AluSx SINE Alu 1 310 -2 5257 146 17 47 chr10 72200725 72201365 -73387923 + L1MA4 LINE L1 5709 6298 -2 1312 213 61 9 chr10 72201406 72201749 -73387539 + L1MB5 LINE L1 5814 6174 0 253 293 17 0 chr10 72201923 72201981 -73387307 - L2 LINE L2 -19 3294 3236 338 185 0 0 chr10 72202071 72202136 -73387152 - MLT1F1 LTR MaLR -4 563 499 300 203 0 0 chr10 72202192 72202237 -73387051 + MLT2B1 LTR ERVL 2 46 -474 1994 159 36 32 chr10 72202237 72202797 -73386491 + MLT2A2 LTR ERVL 1 554 0 1643 205 12 4 chr10 72202797 72203185 -73386103 + MLT2B1 LTR ERVL 42 474 -41 393 136 0 0 chr10 72203185 72203251 -73386037 + (CA)n Simple_repeat Simple_repeat 1 66 0 1439 204 40 47 chr10 72204445 72204965 -73384323 + MLT1E1 LTR MaLR 1 654 0 724 193 43 0 chr10 72205325 72205465 -73383823 - MER7A DNA MER2_type 0 336 191 * 3240 99 59 6 chr10 72205457 72205950 -73383338 + MER1A DNA MER1_type 11 529 0 1057 148 84 20 chr10 72205950 72206150 -73383138 - MER7A DNA MER2_type -135 211 1 457 231 120 0 chr10 72206150 72206267 -73383021 + MIR3 SINE MIR 75 205 -3 21 0 0 0 chr10 72206285 72206306 -73382982 + AT_rich Low_complexity Low_complexity 1 21 0 2397 76 7 0 chr10 72206491 72206793 -73382495 + AluY SINE Alu 1 304 -7 1845 205 104 29 chr10 72207528 72207981 -73381307 + LTR2B LTR ERV1 3 489 -1 24 0 0 0 chr10 72208161 72208185 -73381103 + AT_rich Low_complexity Low_complexity 1 24 0 504 107 0 0 chr10 72209404 72209479 -73379809 + tRNA-Ser-TCA tRNA tRNA 8 82 -3 588 222 37 134 chr10 72209936 72209989 -73379299 + L1ME4a LINE L1 5780 5837 -284 2683 30 0 3 chr10 72209989 72210293 -73378995 + AluY SINE Alu 1 303 -8 588 222 37 134 chr10 72210293 72210613 -73378675 + L1ME4a LINE L1 5837 6117 -4 304 204 31 4 chr10 72210930 72210999 -73378289 - MLT1J LTR MaLR -2 509 448 22 0 0 0 chr10 72211077 72211099 -73378189 + AT_rich Low_complexity Low_complexity 1 22 0 2272 89 7 3 chr10 72211127 72211430 -73377858 + AluSq SINE Alu 1 304 -9 366 259 50 58 chr10 72211668 72211807 -73377481 - MLT1J LTR MaLR -145 366 229 779 256 99 94 chr10 72212291 72212705 -73376583 + LTR67 LTR ERVL 97 512 -45 1982 113 25 0 chr10 72212864 72213163 -73376125 + AluSx SINE Alu 1 306 0 1807 153 16 22 chr10 72213192 72213506 -73375782 - AluJb SINE Alu 0 312 1 194 278 191 71 chr10 72213568 72213694 -73375594 + L2 LINE L2 3132 3272 0 243 241 0 0 chr10 72213926 72213980 -73375308 + CT-rich Low_complexity Low_complexity 4 57 0 624 359 98 15 chr10 72214610 72215150 -73374138 + L2 LINE L2 2364 2948 -366 2054 137 3 0 chr10 72216580 72216873 -73372415 + AluSx SINE Alu 1 294 -18 1237 149 43 19 chr10 72217091 72217299 -73371989 - MER58A DNA MER1_type 0 224 12 552 280 13 19 chr10 72217766 72217923 -73371365 + MIR SINE MIR 20 175 -87 180 0 0 0 chr10 72218346 72218366 -73370922 + (T)n Simple_repeat Simple_repeat 1 20 0 2010 109 60 0 chr10 72218602 72218887 -73370401 - AluSq SINE Alu -11 302 1 259 297 44 22 chr10 72218959 72219050 -73370238 + L2 LINE L2 2765 2857 -457 275 104 21 0 chr10 72219193 72219241 -73370047 + (CA)n Simple_repeat Simple_repeat 2 50 0 22 0 0 0 chr10 72219262 72219284 -73370004 + AT_rich Low_complexity Low_complexity 1 22 0 2141 120 0 10 chr10 72219330 72219638 -73369650 + AluSx SINE Alu 1 305 -7 311 252 109 89 chr10 72219851 72220153 -73369135 - L1MC4a LINE L1 -1797 6011 5704 185 254 48 0 chr10 72220308 72220371 -73368917 - L3 LINE CR1 -108 1469 1404 402 273 170 64 chr10 72221499 72221858 -73367430 - LTR33 LTR ERVL 0 521 125 744 161 0 91 chr10 72222052 72222195 -73367093 + FLAM_A SINE Alu 4 133 0 1505 191 0 15 chr10 72222195 72222462 -73366826 - AluJo SINE Alu -49 263 1 477 305 67 72 chr10 72222694 72223124 -73366164 - L1ME4a LINE L1 -294 5827 5400 588 194 133 24 chr10 72223680 72223845 -73365443 - MER5A DNA MER1_type 0 189 7 326 85 0 0 chr10 72224050 72224097 -73365191 - AluJb SINE Alu 0 302 256 635 157 0 58 chr10 72224097 72224218 -73365070 + AluJo/FRAM SINE Alu 137 250 -62 1543 176 11 11 chr10 72224218 72224490 -73364798 - AluJb SINE Alu -38 274 3 283 281 16 0 chr10 72224511 72224575 -73364713 - L2 LINE L2 -60 3212 3148 600 110 0 0 chr10 72225229 72225311 -73363977 - AluJb SINE Alu -5 307 226 1231 92 0 12 chr10 72225311 72225474 -73363814 - AluJb SINE Alu -122 190 30 273 333 77 24 chr10 72226155 72226362 -73362926 - L2 LINE L2 -17 3255 3038 * 341 312 45 13 chr10 72226334 72226488 -73362800 - MIR3 SINE MIR -17 191 33 1797 157 3 27 chr10 72226685 72226985 -73362303 + AluJo SINE Alu 1 293 -19 1744 179 106 50 chr10 72227158 72227223 -73362065 - MLT1C LTR MaLR 0 467 407 2127 138 0 0 chr10 72227223 72227528 -73361760 - AluJb SINE Alu -7 305 1 1744 179 106 50 chr10 72227528 72227904 -73361384 - MLT1C LTR MaLR -60 407 1 1098 214 70 20 chr10 72227931 72228272 -73361016 - L1MC5 LINE L1 -57 7904 7547 658 289 40 102 chr10 72228723 72229076 -73360212 + L2 LINE L2 2941 3271 -1 302 226 11 43 chr10 72229080 72229173 -73360115 + GA-rich Low_complexity Low_complexity 3 92 0 3085 128 7 0 chr10 72229205 72229636 -73359652 + MER57B LTR ERV1 1 434 0 1591 166 64 11 chr10 72229736 72230019 -73359269 - AluJo SINE Alu -14 298 1 269 279 96 52 chr10 72230031 72230167 -73359121 + Charlie8 DNA MER1_type 61 202 -2215 259 273 30 0 chr10 72230274 72230340 -73358948 + Charlie8 DNA MER1_type 2341 2408 -9 987 183 47 5 chr10 72230419 72230610 -73358678 + MER3 DNA MER1_type 3 201 -8 530 237 191 0 chr10 72230625 72230777 -73358511 - MER5A DNA MER1_type 0 189 9 677 250 6 24 chr10 72230801 72230855 -73358433 - MER5A DNA MER1_type -8 181 128 2063 102 3 58 chr10 72230855 72231168 -73358120 + AluSg SINE Alu 1 296 -14 677 250 6 24 chr10 72231168 72231277 -73358011 - MER5A DNA MER1_type -61 128 21 1342 182 33 119 chr10 72231342 72231634 -73357654 - MLT1A1 LTR MaLR -4 361 110 2907 159 19 16 chr10 72231634 72232118 -73357170 + LTR45B LTR ERV1 5 489 0 1342 182 33 119 chr10 72232118 72232220 -73357068 - MLT1A1 LTR MaLR -255 110 1 2250 103 3 0 chr10 72232225 72232525 -73356763 + AluSq SINE Alu 1 301 -12 1152 150 0 0 chr10 72232526 72232693 -73356595 + AluSg/x SINE Alu 135 301 -11 450 139 0 0 chr10 72232764 72232836 -73356452 - MIR SINE MIR -123 139 68 271 265 103 0 chr10 72233011 72233079 -73356209 - MIR SINE MIR -58 150 76 221 255 235 39 chr10 72233719 72233821 -73355467 - MER5B DNA MER1_type -3 175 54 1974 192 44 25 chr10 72233823 72234230 -73355058 - MER21B LTR ERV1 0 863 449 292 61 143 0 chr10 72234230 72234279 -73355009 - LTR23 LTR ERV1 0 437 382 2315 83 3 0 chr10 72234282 72234570 -73354718 + AluSx SINE Alu 1 289 -23 2403 167 88 12 chr10 72234591 72235010 -73354278 - MER21B LTR ERV1 -411 452 2 196 311 133 11 chr10 72235667 72235757 -73353531 - MIR3 SINE MIR -42 166 66 516 270 61 25 chr10 72236839 72237035 -73352253 + L1MC4a LINE L1 5571 5773 -2035 1059 127 0 6 chr10 72237053 72237243 -73352045 + AluSq SINE Alu 128 316 0 361 303 43 6 chr10 72237243 72237405 -73351883 + L1MC4a LINE L1 5772 5939 -1869 844 154 0 0 chr10 72237662 72237785 -73351503 + FLAM_C SINE Alu 1 123 -20 261 0 0 0 chr10 72237809 72237838 -73351450 + (TG)n Simple_repeat Simple_repeat 2 30 0 30 45 0 0 chr10 72239423 72239467 -73349821 + AT_rich Low_complexity Low_complexity 1 44 0 1899 101 0 91 chr10 72239472 72239790 -73349498 + AluSx SINE Alu 1 289 -23 198 0 0 0 chr10 72239793 72239815 -73349473 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 2155 154 25 19 chr10 72239941 72240304 -73348984 - MLT1A1 LTR MaLR 0 365 1 2105 125 0 7 chr10 72240538 72240834 -73348454 + AluSx SINE Alu 1 294 -18 2129 121 0 0 chr10 72240887 72241168 -73348120 + AluSg SINE Alu 5 285 -25 1719 167 32 0 chr10 72241262 72241543 -73347745 + AluJo SINE Alu 1 290 -22 993 251 103 67 chr10 72242519 72242654 -73346634 + L1ME4a LINE L1 5483 5612 -509 2551 47 0 0 chr10 72242654 72242953 -73346335 + AluY SINE Alu 2 300 -11 993 251 103 67 chr10 72242953 72243292 -73345996 + L1ME4a LINE L1 5612 5937 -184 1738 171 7 7 chr10 72243292 72243596 -73345692 + AluJb SINE Alu 1 304 -8 993 251 103 67 chr10 72243596 72243647 -73345641 + L1ME4a LINE L1 5937 5985 -136 2525 74 3 0 chr10 72243647 72243959 -73345329 - AluSp SINE Alu 0 313 1 993 251 103 67 chr10 72243959 72244032 -73345256 + L1ME4a LINE L1 5985 6105 -16 319 316 68 23 chr10 72244354 72244487 -73344801 + L1ME4a LINE L1 5980 6118 -3 2309 76 14 0 chr10 72244497 72244786 -73344502 + AluSg SINE Alu 1 293 -17 1066 256 108 28 chr10 72244795 72244843 -73344445 - LTR16C LTR ERVL -5 486 443 2029 141 30 0 chr10 72244843 72245142 -73344146 + AluJb SINE Alu 1 308 -4 1066 256 108 28 chr10 72245142 72245453 -73343835 - LTR16C LTR ERVL -48 443 98 2105 101 7 3 chr10 72245562 72245850 -73343438 + AluSg SINE Alu 5 293 -17 2312 108 0 0 chr10 72246406 72246702 -73342586 + AluSq SINE Alu 5 300 -13 2040 130 3 34 chr10 72246736 72247058 -73342230 - AluJo SINE Alu 0 312 1 1533 189 26 43 chr10 72247142 72247563 -73341725 + MER65C LTR ERV1 1 461 0 222 278 0 0 chr10 72247674 72247728 -73341560 - MIR SINE MIR -21 241 188 321 26 0 0 chr10 72247728 72247766 -73341522 + (TG)n Simple_repeat Simple_repeat 1 38 0 1317 184 45 4 chr10 72247766 72248032 -73341256 - AluJb SINE Alu -33 279 3 485 277 7 28 chr10 72248035 72248176 -73341112 - MIR SINE MIR -65 197 60 905 236 4 61 chr10 72249150 72249249 -73340039 - MIR SINE MIR -10 252 149 883 237 0 6 chr10 72249249 72249418 -73339870 - FAM SINE Alu -6 169 2 905 236 4 61 chr10 72249418 72249547 -73339741 - MIR SINE MIR -113 149 37 2214 121 0 0 chr10 72249644 72249941 -73339347 + AluSx SINE Alu 1 297 -15 730 256 14 107 chr10 72249968 72250257 -73339031 + MIR SINE MIR 1 262 0 22 70 0 0 chr10 72250703 72250746 -73338542 + AT_rich Low_complexity Low_complexity 1 43 0 225 132 0 0 chr10 72250943 72250981 -73338307 + (TGGA)n Simple_repeat Simple_repeat 1 38 0 2320 107 0 3 chr10 72251436 72251744 -73337544 + AluSx SINE Alu 1 307 -5 289 231 200 15 chr10 72251744 72251863 -73337425 + L1ME4a LINE L1 5971 6117 -4 2120 122 3 3 chr10 72251875 72252171 -73337117 + AluSg SINE Alu 1 296 -14 619 188 0 0 chr10 72253396 72253497 -73335791 + U6 snRNA snRNA 1 101 -6 210 37 0 0 chr10 72253501 72253528 -73335760 + (CA)n Simple_repeat Simple_repeat 2 28 0 2647 109 5 35 chr10 72254501 72254868 -73334420 + L1PB3 LINE L1 5764 6120 -34 1867 128 203 11 chr10 72254868 72255227 -73334061 - MSTA LTR MaLR 0 428 1 2647 109 5 35 chr10 72255227 72255254 -73334034 + L1PB3 LINE L1 6120 6146 -8 404 96 0 0 chr10 72255523 72255575 -73333713 + Alu SINE Alu 1 52 -259 246 136 19 19 chr10 72256648 72256702 -73332586 + MIR SINE MIR 67 125 -83 197 343 30 0 chr10 72256769 72256836 -73332452 - L2 LINE L2 -22 3291 3223 258 376 42 28 chr10 72257086 72257299 -73331989 - L2 LINE L2 -383 2931 2716 2132 90 3 39 chr10 72257456 72257767 -73331521 + AluSg1 SINE Alu 1 300 -9 1051 145 0 0 chr10 72257768 72257934 -73331354 + AluSg/x SINE Alu 133 298 -12 946 192 6 17 chr10 72257934 72258106 -73331182 + MLT1A1 LTR MaLR 34 203 -162 1176 139 0 0 chr10 72258106 72258271 -73331017 + AluSg/x SINE Alu 132 296 -16 4802 179 39 19 chr10 72258271 72258362 -73330926 + L1MB7 LINE L1 4307 4395 -1789 2285 94 0 33 chr10 72258362 72258669 -73330619 + AluSg SINE Alu 1 297 -13 4802 179 39 19 chr10 72258669 72260121 -73329167 + L1MB7 LINE L1 4390 5880 -299 2448 99 3 0 chr10 72260121 72260433 -73328855 + AluSp SINE Alu 1 313 0 240 156 22 0 chr10 72261156 72261201 -73328087 + L1ME4a LINE L1 5967 6012 -109 25 31 0 0 chr10 72261237 72261269 -73328019 + AT_rich Low_complexity Low_complexity 1 32 0 2148 128 3 3 chr10 72261434 72261740 -73327548 - AluSx SINE Alu -6 306 1 363 288 125 27 chr10 72262085 72262269 -73327019 - MIR SINE MIR -49 213 12 2055 149 0 13 chr10 72262489 72262797 -73326491 + AluSx SINE Alu 1 304 -8 1826 157 0 11 chr10 72262815 72263101 -73326187 + AluJb SINE Alu 1 283 -29 2228 100 7 0 chr10 72263555 72263846 -73325442 - AluSq SINE Alu -17 296 4 2339 70 0 7 chr10 72263946 72264245 -73325043 + AluY SINE Alu 1 297 -14 2018 125 7 0 chr10 72264251 72264538 -73324750 + AluSx SINE Alu 1 289 -23 1183 80 17 0 chr10 72264538 72264714 -73324574 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 188 354 62 18 chr10 72264723 72264836 -73324452 - L2 LINE L2 0 3272 3155 1006 205 133 25 chr10 72265188 72265512 -73323776 + L1ME3 LINE L1 5807 6170 0 2405 99 3 0 chr10 72265665 72265977 -73323311 - AluSp SINE Alu 0 313 1 2338 93 3 0 chr10 72266129 72266420 -73322868 + AluSp SINE Alu 1 292 -21 887 346 103 19 chr10 72266595 72267467 -73321821 - L2 LINE L2 -670 2644 1700 1833 92 32 35 chr10 72267615 72267897 -73321391 + AluSx SINE Alu 14 294 -18 1706 177 32 0 chr10 72268323 72268606 -73320682 + AluJo SINE Alu 2 293 -19 2365 101 0 0 chr10 72268852 72269149 -73320139 + AluSg SINE Alu 3 299 -11 23 54 0 0 chr10 72269255 72269292 -73319996 + AT_rich Low_complexity Low_complexity 1 37 0 2328 96 0 3 chr10 72269604 72269927 -73319361 - AluSx SINE Alu 0 312 3 274 262 354 0 chr10 72269929 72270093 -73319195 + MIR SINE MIR 41 262 0 206 263 0 18 chr10 72270100 72270157 -73319131 - MIR SINE MIR -150 112 57 2021 141 36 0 chr10 72270183 72270489 -73318799 - 7SLRNA srpRNA srpRNA 0 320 4 1839 176 3 0 chr10 72271026 72271328 -73317960 - AluJb SINE Alu -9 303 1 367 98 63 35 chr10 72271348 72271522 -73317766 + (TA)n Simple_repeat Simple_repeat 2 180 0 185 44 82 59 chr10 72271546 72271681 -73317607 + (TA)n Simple_repeat Simple_repeat 2 139 0 310 51 67 62 chr10 72271705 72271883 -73317405 + (TA)n Simple_repeat Simple_repeat 2 180 0 2295 108 0 0 chr10 72271999 72272295 -73316993 + AluSx SINE Alu 1 296 -16 2227 108 7 3 chr10 72272299 72272596 -73316692 + AluSq SINE Alu 1 298 -15 302 324 22 0 chr10 72273043 72273161 -73316127 + L1ME4a LINE L1 5473 5590 -531 289 277 0 0 chr10 72273162 72273245 -73316043 + (TA)n Simple_repeat Simple_repeat 1 83 0 198 103 0 0 chr10 72273569 72273598 -73315690 + (TA)n Simple_repeat Simple_repeat 1 29 0 384 264 58 42 chr10 72273599 72273738 -73315550 + L1ME4a LINE L1 5592 5738 -383 3789 124 15 32 chr10 72273738 72274253 -73315035 + LTR19B LTR ERV1 1 506 -74 2539 65 0 3 chr10 72274253 72274562 -73314726 + AluY SINE Alu 1 308 -3 3789 124 15 32 chr10 72274562 72274636 -73314652 + LTR19B LTR ERV1 506 580 0 384 264 58 42 chr10 72274636 72274757 -73314531 + L1ME4a LINE L1 5738 5856 -265 25 65 0 0 chr10 72274879 72274925 -73314363 + AT_rich Low_complexity Low_complexity 1 46 0 2069 103 31 21 chr10 72274928 72275219 -73314069 + AluSx SINE Alu 3 296 -16 2430 63 0 0 chr10 72275221 72275553 -73313735 + AluY SINE Alu 1 332 0 979 226 19 0 chr10 72275553 72275765 -73313523 - MIR SINE MIR -15 247 32 338 202 0 10 chr10 72275765 72275801 -73313487 + (CATATA)n Simple_repeat Simple_repeat 5 40 -62 2129 119 0 3 chr10 72275801 72276087 -73313201 + AluSg SINE Alu 1 285 -25 338 202 0 10 chr10 72276087 72276149 -73313139 + (CATATA)n Simple_repeat Simple_repeat 40 102 0 198 0 0 0 chr10 72276652 72276674 -73312614 + (TTTTG)n Simple_repeat Simple_repeat 4 25 0 2416 96 6 3 chr10 72276878 72277190 -73312098 + AluSq SINE Alu 1 313 0 2810 187 71 40 chr10 72277359 72278091 -73311197 + L1MC4a LINE L1 6897 7651 -157 889 131 46 20 chr10 72278108 72278261 -73311027 + MER58A DNA MER1_type 34 190 -34 366 61 0 0 chr10 72278315 72278364 -73310924 + (TC)n Simple_repeat Simple_repeat 1 49 0 455 233 0 0 chr10 72278370 72278456 -73310832 - MER96 DNA MER1_type? -89 86 1 718 161 27 7 chr10 72279073 72279222 -73310066 + L1MD3 LINE L1 7844 7995 0 464 233 52 0 chr10 72279325 72279441 -73309847 - MIR SINE MIR -29 233 112 2060 113 27 10 chr10 72279441 72279741 -73309547 + AluSx SINE Alu 1 305 -7 2331 114 0 0 chr10 72280304 72280610 -73308678 + AluSc SINE Alu 1 306 -3 279 0 0 0 chr10 72280612 72280643 -73308645 + (CA)n Simple_repeat Simple_repeat 2 32 0 3070 40 0 5 chr10 72280901 72281275 -73308013 + L1PA8 LINE L1 5801 6172 0 53 69 0 0 chr10 72281777 72281879 -73307409 + AT_rich Low_complexity Low_complexity 1 102 0 497 273 129 16 chr10 72281879 72282190 -73307098 + L1ME4a LINE L1 5695 6040 -81 23 0 0 0 chr10 72282405 72282428 -73306860 + AT_rich Low_complexity Low_complexity 1 23 0 24 32 0 0 chr10 72282526 72282557 -73306731 + AT_rich Low_complexity Low_complexity 1 31 0 1730 153 0 44 chr10 72283383 72283703 -73305585 - AluJb SINE Alu -6 306 1 205 309 0 15 chr10 72283707 72283775 -73305513 - L2 LINE L2 -88 3225 3159 1094 127 6 6 chr10 72283819 72283984 -73305304 + AluSc SINE Alu 134 298 -11 841 169 0 22 chr10 72284229 72284365 -73304923 - FLAM_C SINE Alu -10 133 1 2187 109 10 0 chr10 72284544 72284838 -73304450 + AluSg SINE Alu 1 297 -13 1308 189 9 3 chr10 72284858 72285115 -73304173 + L1M3 LINE L1 5519 5779 -404 2075 146 0 7 chr10 72285118 72285420 -73303868 + AluSx SINE Alu 1 300 -12 820 169 0 0 chr10 72285430 72285548 -73303740 + FLAM_C SINE Alu 1 118 -25 2238 97 14 0 chr10 72285568 72285857 -73303431 - AluSp SINE Alu -20 293 1 1416 190 12 0 chr10 72285864 72286106 -73303182 + MSTB LTR MaLR 182 426 0 6561 168 1 6 chr10 72286107 72287170 -73302118 + MSTA-int LTR MaLR 2 1059 -592 2467 162 18 43 chr10 72287172 72287560 -73301728 + MSTA LTR MaLR 1 397 -31 2093 101 4 7 chr10 72287560 72287863 -73301425 - AluSg1 SINE Alu 0 304 3 2220 137 0 0 chr10 72287872 72288178 -73301110 - AluSg SINE Alu -4 306 1 2467 162 18 43 chr10 72288178 72288217 -73301071 + MSTA LTR MaLR 405 428 0 3254 149 34 36 chr10 72288217 72288537 -73300751 + MSTA-int LTR MaLR 1057 1377 -274 2280 114 0 3 chr10 72288537 72288845 -73300443 - AluSx SINE Alu -4 308 2 3254 149 34 36 chr10 72288845 72289106 -73300182 + MSTA-int LTR MaLR 1377 1637 -14 2410 154 16 48 chr10 72289118 72289487 -73299801 + MSTA LTR MaLR 1 355 -73 1961 165 0 0 chr10 72289487 72289784 -73299504 + AluJb SINE Alu 1 297 -15 2410 154 16 48 chr10 72289784 72289856 -73299432 + MSTA LTR MaLR 355 428 0 1934 127 51 0 chr10 72290194 72290469 -73298819 + AluSg SINE Alu 1 289 -21 1503 202 36 10 chr10 72290474 72290776 -73298512 - MLT1A1 LTR MaLR -55 310 1 2238 101 10 0 chr10 72290872 72291169 -73298119 - AluY SINE Alu -11 300 1 1679 133 65 18 chr10 72291577 72291856 -73297432 + AluJo SINE Alu 1 292 -20 720 296 94 39 chr10 72292022 72292033 -73297255 + L1MC2 LINE L1 5299 5308 -2500 2464 57 0 28 chr10 72292033 72292350 -73296938 + AluY SINE Alu 2 309 -2 720 296 94 39 chr10 72292350 72292932 -73296356 + L1MC2 LINE L1 5308 5925 -1883 1950 105 3 67 chr10 72293003 72293317 -73295971 + AluSg SINE Alu 1 294 -16 2186 101 0 26 chr10 72293327 72293635 -73295653 + AluSq SINE Alu 1 300 -13 2226 82 7 0 chr10 72293823 72294114 -73295174 + AluSq SINE Alu 1 293 -20 570 151 0 0 chr10 72294114 72294220 -73295068 + G-rich Low_complexity Low_complexity 1 106 0 2484 53 0 7 chr10 72295171 72295472 -73293816 + AluY SINE Alu 1 299 -12 388 188 109 0 chr10 72295537 72295638 -73293650 + L1MC2 LINE L1 6207 6318 -26 180 0 0 0 chr10 72295641 72295661 -73293627 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 2275 95 7 3 chr10 72295686 72295981 -73293307 + AluSq SINE Alu 1 296 -17 1215 137 96 4 chr10 72296004 72296409 -73292879 - LTR54 LTR ERV1 -7 503 1 216 255 0 20 chr10 72296435 72296486 -73292802 - MIR SINE MIR -188 74 25 1417 178 21 32 chr10 72296548 72296829 -73292459 + AluJo SINE Alu 19 296 -16 203 154 51 0 chr10 72296836 72296875 -73292413 + GA-rich Low_complexity Low_complexity 1 41 0 184 312 13 26 chr10 72296875 72296952 -73292336 + MIR SINE MIR 19 94 -114 448 242 176 0 chr10 72296982 72297135 -73292153 - MER5A DNA MER1_type 0 189 10 2692 55 0 0 chr10 72297281 72297592 -73291696 + AluY SINE Alu 1 311 0 221 0 35 0 chr10 72298136 72298165 -73291123 + (CAAAAA)n Simple_repeat Simple_repeat 1 30 0 1673 136 43 36 chr10 72298174 72298474 -73290814 + AluJo SINE Alu 1 302 0 1889 46 0 0 chr10 72298799 72299015 -73290273 + AluY SINE Alu 1 216 -95 1213 154 31 0 chr10 72299016 72299211 -73290077 + AluJo SINE Alu 95 295 -17 316 193 36 0 chr10 72299211 72299294 -73289994 + (CATATA)n Simple_repeat Simple_repeat 3 88 0 315 216 0 62 chr10 72299294 72299391 -73289897 - L1MC4 LINE L1 -1337 6705 6615 * 318 315 0 0 chr10 72299320 72299409 -73289879 + L1MC4 LINE L1 6614 6702 -1340 390 42 0 0 chr10 72299409 72299457 -73289831 + (CA)n Simple_repeat Simple_repeat 1 48 0 492 249 97 38 chr10 72299718 72299903 -73289385 + MIR SINE MIR 67 262 0 2260 83 3 26 chr10 72300287 72300589 -73288699 - AluSp SINE Alu -18 295 1 465 281 147 21 chr10 72300956 72301084 -73288204 + L2 LINE L2 2807 2917 -396 1706 143 75 10 chr10 72301084 72301377 -73287911 - AluJb SINE Alu 0 312 1 465 281 147 21 chr10 72301377 72301660 -73287628 + L2 LINE L2 2917 3312 -1 318 229 229 56 chr10 72301780 72301952 -73287336 - L1MC4a LINE L1 -1633 6175 6034 2358 100 0 10 chr10 72301952 72302262 -73287026 - AluSg SINE Alu -3 307 1 318 229 229 56 chr10 72302262 72302273 -73287015 - L1MC4a LINE L1 -1774 6034 6026 2399 99 0 0 chr10 72302273 72302575 -73286713 - AluSg SINE Alu -8 302 1 2202 115 7 3 chr10 72302582 72302887 -73286401 - AluSq SINE Alu -7 306 1 318 229 229 56 chr10 72302887 72302961 -73286327 - L1MC4a LINE L1 -1786 6022 5863 528 258 94 88 chr10 72302978 72303173 -73286115 - L1MC4a LINE L1 -326 5795 5628 2280 110 0 3 chr10 72303173 72303482 -73285806 + AluSg SINE Alu 1 308 -2 528 258 94 88 chr10 72303482 72303697 -73285591 - L1MC4a LINE L1 -493 5628 5416 426 93 0 0 chr10 72303712 72303766 -73285522 - U6 snRNA snRNA -53 54 1 281 115 131 0 chr10 72303768 72303829 -73285459 - L1MC4a LINE L1 -2370 5438 5370 * 2006 140 56 59 chr10 72303828 72304155 -73285133 - L1MB8 LINE L1 -6 6172 5846 1884 129 13 32 chr10 72304155 72304465 -73284823 - AluJo SINE Alu -8 304 1 2006 140 56 59 chr10 72304465 72304476 -73284812 - L1MB8 LINE L1 -332 5846 5836 2236 100 7 10 chr10 72304476 72304785 -73284503 - AluSp SINE Alu 0 313 6 2006 140 56 59 chr10 72304785 72304899 -73284389 - L1MB8 LINE L1 -342 5836 5724 2524 71 0 7 chr10 72304943 72305253 -73284035 + AluY SINE Alu 1 308 -3 1620 201 0 0 chr10 72305582 72305856 -73283432 + AluJo SINE Alu 1 274 -38 2331 106 0 6 chr10 72305947 72306259 -73283029 + AluSx SINE Alu 1 310 -2 954 124 72 0 chr10 72306331 72306484 -73282804 + AluSg/x SINE Alu 141 304 -8 710 235 18 6 chr10 72306667 72306833 -73282455 - MER5B DNA MER1_type -10 168 1 1056 252 121 45 chr10 72308432 72308477 -73280811 + Charlie2a DNA MER1_type 32 72 -2790 2295 84 7 3 chr10 72308477 72308773 -73280515 - AluSg SINE Alu -13 297 1 1056 252 121 45 chr10 72308773 72309167 -73280121 + Charlie2a DNA MER1_type 72 504 -2358 3661 133 121 58 chr10 72309169 72309350 -73279938 + LTR39 LTR ERV1 1 169 -614 2263 115 0 10 chr10 72309350 72309655 -73279633 + AluSp SINE Alu 1 302 -11 3661 133 121 58 chr10 72309655 72310061 -73279227 + LTR39 LTR ERV1 169 646 -137 1857 149 38 3 chr10 72310061 72310349 -73278939 + AluJo SINE Alu 1 298 -14 3661 133 121 58 chr10 72310349 72310497 -73278791 + LTR39 LTR ERV1 646 783 0 602 214 71 0 chr10 72310503 72310629 -73278659 - FAM SINE Alu -47 138 4 814 162 7 7 chr10 72310693 72310870 -73278418 - FRAM SINE Alu 0 187 11 1580 228 131 51 chr10 72310937 72311485 -73277803 - MLT1E LTR MaLR 0 593 2 654 205 11 120 chr10 72311485 72311585 -73277703 + Charlie2a DNA MER1_type 951 1060 -1802 2213 117 0 0 chr10 72311585 72311866 -73277422 + AluSx SINE Alu 1 281 -31 190 0 67 0 chr10 72311868 72311898 -73277390 + (TA)n Simple_repeat Simple_repeat 2 33 0 654 205 11 120 chr10 72311898 72312076 -73277212 + Charlie2a DNA MER1_type 1061 1201 -1661 1701 148 0 0 chr10 72312098 72312348 -73276940 - AluSx SINE Alu -17 295 46 2132 112 24 3 chr10 72312436 72312730 -73276558 + AluSx SINE Alu 1 300 -12 2941 167 152 37 chr10 72312756 72313317 -73275971 + Charlie2a DNA MER1_type 1582 2268 -594 2128 113 3 0 chr10 72313317 72313632 -73275656 - AluSq SINE Alu 0 316 1 2941 167 152 37 chr10 72313632 72313883 -73275405 + Charlie2a DNA MER1_type 2268 2489 -373 2388 96 0 0 chr10 72313918 72314219 -73275069 - AluSx SINE Alu -11 301 1 2436 201 94 64 chr10 72314292 72314544 -73274744 + L1M4 LINE L1 3548 3791 -2355 1815 144 12 50 chr10 72314544 72314673 -73274615 + AluJo SINE Alu 1 133 -179 1486 195 18 18 chr10 72314673 72314856 -73274432 - AluJo SINE Alu 0 309 124 207 0 0 0 chr10 72314856 72314879 -73274409 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 1486 195 18 18 chr10 72314879 72315004 -73274284 - AluJo SINE Alu -184 125 1 1815 144 12 50 chr10 72315004 72315192 -73274096 + AluJo SINE Alu 133 307 -5 2116 99 0 87 chr10 72315195 72315528 -73273760 + AluSq SINE Alu 1 304 -9 2436 201 94 64 chr10 72315528 72315749 -73273539 + L1M4 LINE L1 3792 4005 -2141 1743 161 36 7 chr10 72315749 72316029 -73273259 + AluJo SINE Alu 1 288 -24 2436 201 94 64 chr10 72316029 72316318 -73272970 + L1M4 LINE L1 4005 4338 -1808 775 136 17 90 chr10 72316320 72316342 -73272946 + L1MA7 LINE L1 6034 6056 -235 2569 58 0 0 chr10 72316342 72316637 -73272651 - AluY SINE Alu -16 295 1 775 136 17 90 chr10 72316637 72316779 -73272509 + L1MA7 LINE L1 6056 6187 -104 2364 108 0 0 chr10 72316779 72317085 -73272203 - AluSg SINE Alu -4 306 1 775 136 17 90 chr10 72317085 72317096 -73272192 + L1MA7 LINE L1 6187 6197 -94 1639 134 115 7 chr10 72317096 72317365 -73271923 - AluSg1 SINE Alu -11 298 1 641 165 17 102 chr10 72317365 72317463 -73271825 + L1M4 LINE L1 4677 4755 -1391 2329 107 0 0 chr10 72317463 72317771 -73271517 + AluSc SINE Alu 1 308 -1 641 165 17 102 chr10 72317771 72317848 -73271440 + L1M4 LINE L1 4755 4837 -1309 2231 96 14 0 chr10 72317866 72318158 -73271130 - AluSg SINE Alu -14 296 1 1233 137 0 0 chr10 72318158 72318340 -73270948 + AluSg/x SINE Alu 120 301 -11 744 233 27 47 chr10 72318341 72318473 -73270815 + L1M4 LINE L1 5036 5169 -977 2117 129 0 0 chr10 72318473 72318775 -73270513 + AluSx SINE Alu 3 304 -8 744 233 27 47 chr10 72318775 72318892 -73270396 + L1M4 LINE L1 5169 5280 -866 2519 71 0 3 chr10 72318892 72319200 -73270088 + AluY SINE Alu 1 307 -4 744 233 27 47 chr10 72319200 72319225 -73270063 + L1M4 LINE L1 5280 5304 -842 2021 97 34 4 chr10 72319836 72320103 -73269185 - AluSx SINE Alu -37 275 1 356 257 91 27 chr10 72320109 72320296 -73268992 - L1MC/D LINE L1 -2341 5467 5269 932 216 22 36 chr10 72320505 72320727 -73268561 - MER20 DNA MER1_type 0 219 1 1366 187 12 12 chr10 72320898 72321139 -73268149 + AluJo SINE Alu 50 290 -22 2413 94 0 0 chr10 72321494 72321793 -73267495 - AluSg SINE Alu -11 299 1 1811 168 0 46 chr10 72321822 72322002 -73267286 - AluJb SINE Alu 0 312 152 2267 111 0 0 chr10 72322002 72322299 -73266989 - AluSg SINE Alu -13 297 1 1811 168 0 46 chr10 72322299 72322445 -73266843 - AluJb SINE Alu -160 152 1 2167 127 0 9 chr10 72322478 72322793 -73266495 + AluSx SINE Alu 1 312 0 1633 134 68 119 chr10 72322818 72323203 -73266085 - LTR56 LTR ERV1 0 445 87 1656 171 4 4 chr10 72323203 72323472 -73265816 - AluJb SINE Alu -43 269 1 1633 134 68 119 chr10 72323472 72323555 -73265733 - LTR56 LTR ERV1 -358 87 1 39 0 0 20 chr10 72323569 72323589 -73265699 + AT_rich Low_complexity Low_complexity 1 20 -29 2205 115 0 0 chr10 72323589 72323877 -73265411 + AluSg SINE Alu 1 288 -22 39 0 0 20 chr10 72323877 72323906 -73265382 + AT_rich Low_complexity Low_complexity 20 49 0 2458 80 0 3 chr10 72324022 72324334 -73264954 - AluY SINE Alu 0 311 1 807 128 8 0 chr10 72324334 72324451 -73264837 - AluSp SINE Alu -177 136 19 1509 149 112 4 chr10 72324617 72324885 -73264403 - AluSg1 SINE Alu -12 297 1 2129 125 0 7 chr10 72324899 72325196 -73264092 - AluSx SINE Alu -15 297 3 2413 74 3 3 chr10 72325203 72325500 -73263788 - AluY SINE Alu -14 297 1 1616 205 3 0 chr10 72325503 72325796 -73263492 - AluJo SINE Alu -18 294 1 26 64 0 0 chr10 72325842 72325889 -73263399 + AT_rich Low_complexity Low_complexity 1 47 0 313 291 74 34 chr10 72325902 72325998 -73263290 - L1MC/D LINE L1 -1051 5095 4989 2065 111 10 23 chr10 72325998 72326304 -73262984 - AluSp SINE Alu -11 302 1 313 291 74 34 chr10 72326304 72326355 -73262933 - L1MC/D LINE L1 -1157 4989 4942 212 59 29 0 chr10 72326452 72326486 -73262802 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 2493 61 0 0 chr10 72326490 72326784 -73262504 - AluY SINE Alu -16 295 2 2355 100 0 3 chr10 72326840 72327149 -73262139 - AluSq SINE Alu -5 308 1 1139 98 0 23 chr10 72327683 72327792 -73261496 - L1PA8 LINE L1 -8 6164 6059 2449 73 3 0 chr10 72327792 72328094 -73261194 - AluSp SINE Alu -10 303 1 1139 98 0 23 chr10 72328094 72328157 -73261131 - L1PA8 LINE L1 -113 6059 5996 200 275 150 58 chr10 72328249 72328369 -73260919 - MIR3 SINE MIR -28 180 50 204 308 145 8 chr10 72328774 72328891 -73260397 - MIR3 SINE MIR -46 162 30 22 0 0 0 chr10 72329355 72329377 -73259911 + GC_rich Low_complexity Low_complexity 1 22 0 192 89 0 71 chr10 72329823 72329879 -73259409 + (CGG)n Simple_repeat Simple_repeat 3 54 0 232 211 18 0 chr10 72329977 72330034 -73259254 + (CGA)n Simple_repeat Simple_repeat 3 60 0 218 143 0 41 chr10 72330372 72330421 -73258867 + (TTTTC)n Simple_repeat Simple_repeat 5 51 0 2496 59 10 0 chr10 72330832 72331135 -73258153 - AluSc SINE Alu -3 306 1 1545 132 140 0 chr10 72331205 72331470 -73257818 + AluJo SINE Alu 1 302 0 2410 95 0 6 chr10 72331751 72332066 -73257222 - AluSp SINE Alu 0 313 1 2247 91 3 0 chr10 72332469 72332766 -73256522 - AluSp SINE Alu -11 302 5 565 302 55 17 chr10 72332808 72333043 -73256245 + L2 LINE L2 3070 3313 0 180 0 0 0 chr10 72333195 72333215 -73256073 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 554 155 0 0 chr10 72334870 72334967 -73254321 - AluJb SINE Alu -8 304 208 2202 98 0 0 chr10 72334974 72335248 -73254040 - AluSg SINE Alu -36 274 1 1637 174 50 0 chr10 72335362 72335644 -73253644 + AluJb SINE Alu 6 301 -11 2410 93 0 0 chr10 72335644 72335954 -73253334 + AluY SINE Alu 1 311 0 743 158 73 161 chr10 72336935 72337183 -73252105 + MER33 DNA MER1_type 2 270 -2315 1628 179 14 7 chr10 72337183 72337468 -73251820 + AluJo SINE Alu 1 287 -25 743 158 73 161 chr10 72337468 72337493 -73251795 + MER33 DNA MER1_type 270 296 -2289 2235 116 0 0 chr10 72337493 72337796 -73251492 - AluSx SINE Alu -9 303 1 743 158 73 161 chr10 72337796 72337875 -73251413 + MER33 DNA MER1_type 296 324 0 2347 86 0 3 chr10 72338027 72338341 -73250947 - L1PA8 LINE L1 -4 6168 5856 2125 120 0 7 chr10 72338436 72338736 -73250552 - AluSg SINE Alu -11 299 2 637 222 0 8 chr10 72338891 72339008 -73250280 + FLAM_C SINE Alu 5 120 -23 1948 121 45 3 chr10 72339600 72339890 -73249398 - AluSc SINE Alu -7 302 1 1633 117 0 12 chr10 72340034 72340274 -73249014 + AluSq SINE Alu 3 239 -74 2264 95 20 3 chr10 72340628 72340933 -73248355 - AluSq SINE Alu -3 310 1 667 173 129 104 chr10 72341007 72341045 -73248243 - MER20 DNA MER1_type -4 215 179 1149 194 82 61 chr10 72341045 72341338 -73247950 - AluJo SINE Alu -3 299 1 667 173 129 104 chr10 72341338 72341408 -73247880 - MER20 DNA MER1_type -40 179 112 1740 117 139 15 chr10 72341408 72341682 -73247606 + AluSx SINE Alu 1 308 -4 667 173 129 104 chr10 72341682 72341774 -73247514 - MER20 DNA MER1_type -107 112 9 1868 139 21 4 chr10 72341783 72342064 -73247224 + AluSx SINE Alu 11 296 -16 1803 124 75 3 chr10 72342180 72342325 -73246963 - AluSq SINE Alu -11 302 169 1685 121 17 0 chr10 72342325 72342556 -73246732 - AluSg SINE Alu -75 235 1 1803 124 75 3 chr10 72342556 72342692 -73246596 - AluSq SINE Alu -144 169 1 207 0 0 0 chr10 72342843 72342866 -73246422 + (T)n Simple_repeat Simple_repeat 1 23 0 2292 93 33 0 chr10 72342883 72343183 -73246105 + AluSg SINE Alu 1 310 0 868 190 6 0 chr10 72343584 72343742 -73245546 + FRAM SINE Alu 1 159 -7 321 155 0 84 chr10 72344070 72344141 -73245147 + AluS SINE Alu 1 65 -243 38 22 0 0 chr10 72344197 72344242 -73245046 + AT_rich Low_complexity Low_complexity 1 45 0 251 279 84 32 chr10 72344493 72344647 -73244641 - L1MC/D LINE L1 -1925 5883 5722 2097 110 7 3 chr10 72344697 72344987 -73244301 + AluSx SINE Alu 1 291 -21 27 0 0 0 chr10 72344990 72345017 -73244271 + AT_rich Low_complexity Low_complexity 1 27 0 2090 116 7 3 chr10 72345029 72345339 -73243949 - AluSx SINE Alu 0 311 1 1582 185 7 11 chr10 72345352 72345628 -73243660 - AluJo SINE Alu -27 285 11 934 151 141 16 chr10 72346056 72346241 -73243047 - AluJo SINE Alu -15 297 90 382 218 0 59 chr10 72346363 72346464 -73242824 - MER58C DNA MER1_type -3 212 118 362 213 13 0 chr10 72346622 72346697 -73242591 + MER58 DNA MER1_type 1 76 -139 1042 103 146 19 chr10 72346715 72346875 -73242413 - L1MA8 LINE L1 -7 6284 6089 2481 71 3 0 chr10 72346875 72347183 -73242105 - AluSq SINE Alu -4 309 1 1042 103 146 19 chr10 72347183 72347235 -73242053 - L1MA8 LINE L1 -202 6089 6045 480 206 79 16 chr10 72347278 72347404 -73241884 + MER58 DNA MER1_type 88 221 -2199 2034 112 28 11 chr10 72347706 72347992 -73241296 + AluSx SINE Alu 1 291 -21 725 228 0 7 chr10 72348004 72348153 -73241135 - FAM SINE Alu -37 148 1 2260 91 3 13 chr10 72348283 72348581 -73240707 - AluY SINE Alu -16 295 1 1799 152 9 32 chr10 72349012 72349328 -73239960 - AluJb SINE Alu 0 312 4 2476 71 7 0 chr10 72349457 72349754 -73239534 + AluSp SINE Alu 1 299 -14 628 189 82 36 chr10 72350602 72350868 -73238420 - L1MC4a LINE L1 -153 5968 5698 2127 128 13 0 chr10 72352106 72352412 -73236876 + AluSx SINE Alu 1 310 -2 2031 147 7 0 chr10 72353515 72353807 -73235481 + AluSx SINE Alu 1 294 -18 2156 113 3 0 chr10 72354468 72354768 -73234520 - AluSq SINE Alu -12 301 1 780 191 0 0 chr10 72354773 72354904 -73234384 - FLAM_A SINE Alu -2 131 1 2101 132 0 0 chr10 72354996 72355285 -73234003 + AluSx SINE Alu 11 299 -13 1507 198 20 13 chr10 72356088 72356386 -73232902 - AluJo SINE Alu -12 300 1 439 223 6 6 chr10 72356512 72356687 -73232601 + CT-rich Low_complexity Low_complexity 4 178 0 1741 106 70 8 chr10 72356701 72356957 -73232331 - AluSx SINE Alu -40 272 1 527 244 48 42 chr10 72356995 72357163 -73232125 - MIR SINE MIR -30 232 64 472 268 177 10 chr10 72358195 72358404 -73230884 - MIR SINE MIR -18 244 1 2447 97 0 0 chr10 72358953 72359263 -73230025 - AluSg SINE Alu 0 310 1 1650 168 0 64 chr10 72359592 72359919 -73229369 - AluSq SINE Alu -7 306 1 335 182 182 11 chr10 72360774 72360862 -73228426 - MIR SINE MIR -113 149 47 661 148 0 9 chr10 72360898 72361006 -73228282 - FLAM_A SINE Alu -20 122 16 23 0 0 0 chr10 72361684 72361707 -73227581 + AT_rich Low_complexity Low_complexity 1 23 0 2204 96 7 0 chr10 72363824 72364117 -73225171 + AluSx SINE Alu 1 295 -17 323 209 105 0 chr10 72364450 72364536 -73224752 + MER104 DNA Tc2 72 166 -14 473 277 50 14 chr10 72364752 72364893 -73224395 - MER5B DNA MER1_type -30 148 3 2012 127 6 16 chr10 72365413 72365728 -73223560 - AluSx SINE Alu 0 312 1 256 220 17 0 chr10 72366466 72366525 -73222763 - MER46C DNA MER2_type 0 338 279 355 202 160 8 chr10 72366570 72366689 -73222599 - MER46C DNA MER2_type -200 138 2 31 0 0 0 chr10 72366843 72366874 -73222414 + AT_rich Low_complexity Low_complexity 1 31 0 201 238 0 0 chr10 72368244 72368286 -73221002 + L2 LINE L2 3227 3268 -4 285 253 24 12 chr10 72368290 72368373 -73220915 + MARNA DNA Mariner 137 220 -366 1059 124 98 16 chr10 72368459 72368652 -73220636 - AluJb SINE Alu -17 295 87 1894 138 26 35 chr10 72368989 72369183 -73220105 - MER2 DNA MER2_type 0 345 154 1963 128 73 9 chr10 72369183 72369510 -73219778 - MER7A DNA MER2_type 0 346 1 1894 138 26 35 chr10 72369510 72369662 -73219626 - MER2 DNA MER2_type -191 154 2 1998 180 144 34 chr10 72370498 72370970 -73218318 + MLT1F LTR MaLR 7 530 -12 2382 95 0 6 chr10 72371006 72371321 -73217967 + AluSq SINE Alu 1 313 0 291 272 127 76 chr10 72371393 72371551 -73217737 + L2 LINE L2 2867 3032 -240 301 239 177 35 chr10 72371560 72371673 -73217615 - L2 LINE L2 0 3313 3185 247 242 8 153 chr10 72371778 72371902 -73217386 + L2 LINE L2 3201 3306 -7 468 0 0 0 chr10 72372273 72372325 -73216963 + (TA)n Simple_repeat Simple_repeat 2 53 0 2318 92 0 3 chr10 72372325 72372618 -73216670 - AluSc SINE Alu -17 292 1 1059 251 117 19 chr10 72372702 72373128 -73216160 - L2 LINE L2 -40 3273 2800 410 278 7 40 chr10 72373157 72373308 -73215980 - HAL1 LINE L1 -1749 758 613 581 269 87 97 chr10 72373376 72373534 -73215754 - HAL1 LINE L1 -2109 398 240 2141 103 7 7 chr10 72373534 72373825 -73215463 + AluSg SINE Alu 1 291 -19 581 269 87 97 chr10 72373825 72374068 -73215220 - HAL1 LINE L1 -2267 240 1 1800 230 60 84 chr10 72374094 72374419 -73214869 - L1ME1 LINE L1 -17 6149 5818 1817 159 28 0 chr10 72374419 72374708 -73214580 - AluJb SINE Alu -15 297 1 2320 56 28 3 chr10 72374713 72374999 -73214289 - AluSp SINE Alu -20 293 1 1800 230 60 84 chr10 72374999 72375143 -73214145 - L1ME1 LINE L1 -352 5814 5668 654 159 14 28 chr10 72375143 72375288 -73214000 - L1MB2 LINE L1 -7 6164 6022 1800 230 60 84 chr10 72375288 72375546 -73213742 - L1ME1 LINE L1 -498 5668 5433 1601 124 0 0 chr10 72375655 72375873 -73213415 - AluSx SINE Alu -94 218 1 1915 106 17 20 chr10 72375884 72376177 -73213111 - AluSc SINE Alu -17 292 1 2070 84 0 0 chr10 72376367 72376618 -73212670 - AluSx SINE Alu -61 251 1 1207 193 6 111 chr10 72376655 72376857 -73212431 - AluJo SINE Alu -15 297 142 2177 113 3 0 chr10 72376857 72377150 -73212138 - AluSx SINE Alu -18 294 1 1207 193 6 111 chr10 72377150 72377279 -73212009 - AluJo SINE Alu -170 142 1 21 0 0 0 chr10 72377961 72377982 -73211306 + AT_rich Low_complexity Low_complexity 1 21 0 231 180 0 0 chr10 72378567 72378617 -73210671 - HAL1 LINE L1 -1 2506 2457 695 291 44 5 chr10 72378625 72378828 -73210460 - MIR SINE MIR -2 260 50 264 246 272 15 chr10 72378934 72379206 -73210082 - HAL1 LINE L1 -115 2392 2051 1176 244 209 21 chr10 72379210 72379824 -73209464 - HAL1 LINE L1 -508 1999 1271 2137 118 0 0 chr10 72380041 72380338 -73208950 - AluY SINE Alu -14 297 1 476 311 57 79 chr10 72380416 72380873 -73208415 - HAL1 LINE L1 -1947 560 114 24 0 0 0 chr10 72381130 72381154 -73208134 + AT_rich Low_complexity Low_complexity 1 24 0 2191 111 0 3 chr10 72382576 72382874 -73206414 - AluSx SINE Alu -13 299 3 22 0 0 0 chr10 72383031 72383053 -73206235 + AT_rich Low_complexity Low_complexity 1 22 0 2311 104 7 0 chr10 72383055 72383362 -73205926 + AluSc SINE Alu 1 309 0 2343 101 0 0 chr10 72383558 72383864 -73205424 + AluSg SINE Alu 1 306 -4 466 191 159 8 chr10 72384246 72384372 -73204916 + MIR SINE MIR 113 257 -5 198 0 0 0 chr10 72384813 72384835 -73204453 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 2120 89 11 14 chr10 72384839 72385120 -73204168 - AluSg SINE Alu -30 280 1 30 45 0 0 chr10 72385133 72385177 -73204111 + AT_rich Low_complexity Low_complexity 1 44 0 2015 95 3 82 chr10 72385318 72385634 -73203654 - AluSx SINE Alu -16 296 6 235 240 89 34 chr10 72386051 72386197 -73203091 - L1ME4a LINE L1 -4 6117 5964 433 197 76 8 chr10 72386324 72386456 -73202832 - L1ME4a LINE L1 -1 6120 5980 243 88 73 176 chr10 72386524 72386564 -73202724 - L1ME4a LINE L1 -258 5863 5831 1975 105 84 3 chr10 72386564 72386849 -73202439 - AluSx SINE Alu -4 308 1 243 88 73 176 chr10 72386849 72386876 -73202412 - L1ME4a LINE L1 -290 5831 5803 511 234 0 31 chr10 72387111 72387239 -73202049 + MIR SINE MIR 139 262 0 2181 93 4 0 chr10 72387400 72387699 -73201589 - AluSp SINE Alu 0 305 6 306 307 59 55 chr10 72388132 72388334 -73200954 + HAL1 LINE L1 10 212 -2295 329 306 87 35 chr10 72388501 72388674 -73200614 + HAL1 LINE L1 454 635 -1872 13673 131 45 25 chr10 72388756 72390896 -73198392 + L1M1 LINE L1 1369 3465 -4100 1560 175 23 0 chr10 72390896 72391153 -73198135 + AluJb SINE Alu 33 295 -17 13673 131 45 25 chr10 72391153 72391235 -73198053 + L1M1 LINE L1 3465 3544 -4021 462 18 0 0 chr10 72391235 72391290 -73197998 + (CA)n Simple_repeat Simple_repeat 2 56 0 13673 131 45 25 chr10 72391290 72391519 -73197769 + L1M1 LINE L1 3544 3767 -3798 2099 115 0 4 chr10 72391519 72391818 -73197470 + AluSc SINE Alu 1 298 0 13673 131 45 25 chr10 72391818 72392120 -73197168 + L1M1 LINE L1 3767 4169 -3396 2317 202 44 146 chr10 72392140 72392749 -73196539 + L1P5 LINE L1 2244 2913 -3238 1045 85 0 0 chr10 72392749 72392878 -73196410 - AluSg SINE Alu -179 131 3 2317 202 44 146 chr10 72392878 72393530 -73195758 + L1P5 LINE L1 2913 3630 -2521 1979 145 0 0 chr10 72393530 72393813 -73195475 + AluSx SINE Alu 1 283 -29 2317 202 44 146 chr10 72393813 72393863 -73195425 + L1P5 LINE L1 3630 3683 -2468 2235 103 0 25 chr10 72393863 72393983 -73195305 + AluY SINE Alu 1 122 -189 216 0 0 0 chr10 72393983 72394007 -73195281 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 2235 103 0 25 chr10 72394007 72394205 -73195083 + AluY SINE Alu 122 311 0 2317 202 44 146 chr10 72394205 72394636 -73194652 + L1P5 LINE L1 3683 4156 -1995 2005 131 29 10 chr10 72394636 72394942 -73194346 + AluSx SINE Alu 1 312 0 2317 202 44 146 chr10 72394942 72395080 -73194208 + L1P5 LINE L1 4156 5607 -544 2308 99 3 0 chr10 72395173 72395467 -73193821 - AluSx SINE Alu -17 295 1 517 282 36 15 chr10 72395481 72395676 -73193612 + L1MC4 LINE L1 6471 6669 -1373 2163 99 0 3 chr10 72395824 72396127 -73193161 + AluY SINE Alu 1 302 -9 446 197 87 31 chr10 72396134 72396261 -73193027 - L1MD3 LINE L1 -33 7949 7642 1268 159 88 115 chr10 72396635 72397114 -73192174 + L1MC5 LINE L1 6773 7238 -723 700 182 14 47 chr10 72397249 72397397 -73191891 - MER58B DNA MER1_type -3 338 196 32 43 0 0 chr10 72398040 72398086 -73191202 + AT_rich Low_complexity Low_complexity 1 46 0 2259 110 3 0 chr10 72398696 72399004 -73190284 + AluSq SINE Alu 1 309 -4 25 0 0 0 chr10 72399312 72399337 -73189951 + AT_rich Low_complexity Low_complexity 1 25 0 234 283 238 42 chr10 72400841 72401019 -73188269 - L3 LINE CR1 -5 1572 1430 2077 119 0 3 chr10 72401019 72401313 -73187975 - AluSg SINE Alu -17 293 1 234 283 238 42 chr10 72401313 72401491 -73187797 - L3 LINE CR1 -147 1430 1146 1245 244 121 13 chr10 72403163 72403552 -73185736 + MER77 LTR ERV1 57 487 -118 2318 79 10 0 chr10 72403598 72403889 -73185399 - AluSp SINE Alu -19 294 1 638 189 15 35 chr10 72404704 72404859 -73184429 + MER77 LTR ERV1 466 599 -6 562 198 17 9 chr10 72405264 72405380 -73183908 - L1MC1 LINE L1 -11 6322 6206 2159 101 24 0 chr10 72406346 72406633 -73182655 - AluSx SINE Alu -16 296 3 561 291 199 0 chr10 72407184 72407490 -73181798 + L2 LINE L2 1705 2071 -1243 600 325 148 36 chr10 72407491 72407889 -73181399 + L2 LINE L2 2460 2812 -501 2262 107 3 3 chr10 72407889 72408197 -73181091 - AluSg SINE Alu -2 308 1 600 325 148 36 chr10 72408197 72408565 -73180723 + L2 LINE L2 2812 3313 0 182 244 134 94 chr10 72408748 72408875 -73180413 - L2 LINE L2 -7 3306 3175 1534 152 4 4 chr10 72409170 72409401 -73179887 - AluSx SINE Alu -79 233 3 200 35 35 0 chr10 72409553 72409582 -73179706 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 2441 81 0 0 chr10 72409983 72410279 -73179009 - AluY SINE Alu -15 296 1 251 296 14 14 chr10 72410341 72410412 -73178876 - L2 LINE L2 -1 3271 3201 453 279 104 5 chr10 72410680 72410881 -73178407 + L1MC4 LINE L1 7275 7495 -547 * 462 242 29 17 chr10 72410854 72411079 -73178209 + L1MC4 LINE L1 7300 7626 -416 386 231 0 51 chr10 72411112 72411229 -73178059 + L1ME LINE L1 898 1008 -5923 299 254 57 33 chr10 72411293 72411415 -73177873 + L1ME LINE L1 1173 1297 -5634 207 0 0 0 chr10 72411433 72411456 -73177832 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2356 84 0 10 chr10 72411503 72411800 -73177488 - AluY SINE Alu -17 294 1 1132 230 170 4 chr10 72411821 72412273 -73177015 + L1ME LINE L1 3150 3676 -3265 1657 283 135 60 chr10 72412282 72413435 -73175853 + L1ME LINE L1 110 1363 -5060 2111 140 0 6 chr10 72413435 72413749 -73175539 + AluSx SINE Alu 1 312 0 1657 283 135 60 chr10 72413749 72413834 -73175454 + L1ME LINE L1 1363 1440 -4983 702 232 109 6 chr10 72413835 72414193 -73175095 + L1ME LINE L1 3716 4110 -2831 2357 214 98 68 chr10 72414206 72415057 -73174231 + L1ME LINE L1 4221 5045 -1896 2164 153 0 0 chr10 72415057 72415365 -73173923 + AluSq SINE Alu 1 308 -5 2450 70 10 13 chr10 72415365 72415679 -73173609 + AluSp SINE Alu 1 313 0 2357 214 98 68 chr10 72415679 72415860 -73173428 + L1ME LINE L1 5044 5285 -1656 559 277 74 27 chr10 72415963 72416299 -73172989 + L1MC4 LINE L1 7691 8042 0 192 200 29 0 chr10 72416340 72416375 -73172913 - L2 LINE L2 -334 2979 2944 673 214 0 0 chr10 72416765 72416891 -73172397 + AluSp/q SINE Alu 172 297 -16 337 256 122 56 chr10 72416937 72417117 -73172171 - MIR SINE MIR -50 212 21 1604 112 5 5 chr10 72417122 72417337 -73171951 - AluSq SINE Alu -98 215 1 838 182 62 84 chr10 72417656 72417881 -73171407 + MER58A DNA MER1_type 2 221 -3 17473 165 54 30 chr10 72418177 72419386 -73169902 + L1M1 LINE L1 17 1195 -6370 1874 160 3 0 chr10 72419386 72419673 -73169615 + AluJb SINE Alu 1 288 -24 2038 109 41 3 chr10 72419680 72419973 -73169315 + AluSx SINE Alu 1 304 -8 17473 165 54 30 chr10 72419973 72421425 -73167863 + L1M1 LINE L1 1200 2616 -4949 1744 78 0 5 chr10 72421425 72421643 -73167645 + AluY SINE Alu 85 301 -10 17473 165 54 30 chr10 72421643 72421807 -73167481 + L1M1 LINE L1 2616 2775 -4790 2107 78 3 71 chr10 72421807 72422115 -73167173 - AluSp SINE Alu -22 291 5 17473 165 54 30 chr10 72422115 72423360 -73165928 + L1M1 LINE L1 2775 4193 -3372 1696 146 59 17 chr10 72423361 72423649 -73165639 + AluSx SINE Alu 1 300 -12 4184 143 47 17 chr10 72423651 72424530 -73164758 + L1ME LINE L1 5269 6173 -768 1633 109 4 4 chr10 72424532 72424762 -73164526 + AluSx SINE Alu 1 230 -82 2545 123 10 2 chr10 72424768 72425184 -73164104 + L1MA2 LINE L1 5352 5770 -535 2351 89 0 25 chr10 72425184 72425500 -73163788 + AluY SINE Alu 1 308 -3 1159 143 0 0 chr10 72425500 72425661 -73163627 + AluSg/x SINE Alu 132 292 -18 1516 98 41 59 chr10 72425662 72425706 -73163582 + L1MA2 LINE L1 5765 5808 -496 2174 120 3 3 chr10 72425706 72426005 -73163283 + AluSx SINE Alu 1 299 -13 1516 98 41 59 chr10 72426005 72426274 -73163014 + L1MA2 LINE L1 5808 6231 -73 2201 113 0 20 chr10 72426274 72426575 -73162713 - AluSx SINE Alu -17 295 1 1516 98 41 59 chr10 72426575 72426646 -73162642 + L1MA2 LINE L1 6231 6302 -2 378 355 73 73 chr10 72426771 72427030 -73162258 + L2 LINE L2 3010 3268 -4 2151 118 3 14 chr10 72428046 72428342 -73160946 - AluSx SINE Alu -19 293 1 197 160 0 40 chr10 72432138 72432188 -73157100 + A-rich Low_complexity Low_complexity 3 50 0 201 167 0 0 chr10 72432703 72432739 -73156549 + A-rich Low_complexity Low_complexity 1 36 0 29 28 0 0 chr10 72433185 72433221 -73156067 + AT_rich Low_complexity Low_complexity 1 36 0 1657 152 65 7 chr10 72433591 72433867 -73155421 - AluJb SINE Alu -20 292 1 2287 102 7 7 chr10 72434748 72435053 -73154235 + AluSx SINE Alu 1 305 -7 942 163 36 6 chr10 72435058 72435224 -73154064 + FAM SINE Alu 2 172 -3 2319 113 3 0 chr10 72436107 72436417 -73152871 - AluSp SINE Alu -2 311 1 1673 104 155 0 chr10 72436420 72436671 -73152617 - AluSx SINE Alu -18 294 5 395 270 74 16 chr10 72436722 72436911 -73152377 - L1MC5 LINE L1 -516 7445 7246 384 283 16 68 chr10 72437110 72437301 -73151987 - L1ME LINE L1 -683 5438 5258 259 168 13 6 chr10 72437710 72437936 -73151352 + AluJo SINE Alu 2 261 -41 240 194 104 0 chr10 72438032 72438099 -73151189 + LTR37A LTR ERV1 46 119 -307 556 216 39 28 chr10 72438179 72438360 -73150928 - Charlie1 DNA MER1_type -19 2742 2560 1775 116 85 0 chr10 72438387 72438495 -73150793 + AluY SINE Alu 1 98 -209 188 0 74 0 chr10 72438495 72438522 -73150766 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 1775 116 85 0 chr10 72438522 72438698 -73150590 + AluY SINE Alu 98 307 0 277 290 63 45 chr10 72438927 72439196 -73150092 + MER31-int LTR ERV1 2471 2744 -2192 593 148 16 25 chr10 72439231 72439353 -73149935 + MLT1B LTR MaLR 1 121 -269 313 241 0 0 chr10 72439515 72439573 -73149715 - MER2 DNA MER2_type -1 344 287 2287 94 10 0 chr10 72439582 72439881 -73149407 - AluSc SINE Alu -7 302 1 21 36 0 0 chr10 72439916 72439944 -73149344 + AT_rich Low_complexity Low_complexity 1 28 0 1708 171 10 0 chr10 72440114 72440424 -73148864 + AluSp SINE Alu 1 313 0 381 136 73 158 chr10 72440429 72440606 -73148682 + L1M4 LINE L1 4329 4490 -1656 559 277 74 27 chr10 72440709 72441045 -73148243 + L1MC4 LINE L1 7691 8042 0 192 200 29 0 chr10 72441086 72441121 -73148167 - L2 LINE L2 -334 2979 2944 200 309 18 0 chr10 72441561 72441616 -73147672 - L2 LINE L2 -825 2489 2434 2295 91 17 0 chr10 72441643 72441939 -73147349 + AluSc SINE Alu 1 301 -8 402 21 0 0 chr10 72441948 72441995 -73147293 + (CA)n Simple_repeat Simple_repeat 2 48 0 1090 82 0 0 chr10 72442775 72442909 -73146379 + AluSg1 SINE Alu 1 134 -175 1211 128 6 17 chr10 72443009 72443189 -73146099 + AluSg1 SINE Alu 119 296 -16 1997 124 32 3 chr10 72443373 72443656 -73145632 - AluSq SINE Alu -22 291 1 32 0 0 0 chr10 72443665 72443697 -73145591 + AT_rich Low_complexity Low_complexity 1 32 0 453 249 134 46 chr10 72444236 72444625 -73144663 + MER31-int LTR ERV1 3381 3803 -1133 865 158 0 0 chr10 72444651 72444778 -73144510 - FLAM_C SINE Alu -11 132 6 710 186 68 107 chr10 72444845 72444884 -73144404 + MER77 LTR ERV1 1 40 -565 2014 156 123 28 chr10 72444884 72444922 -73144366 + MLT1C LTR MaLR 4 37 -430 1943 139 10 3 chr10 72444922 72445217 -73144071 + AluJb SINE Alu 1 297 -15 2014 156 123 28 chr10 72445217 72445602 -73143686 + MLT1C LTR MaLR 37 467 0 710 186 68 107 chr10 72445602 72445714 -73143574 + MER77 LTR ERV1 40 141 -464 1919 178 0 3 chr10 72445714 72446012 -73143276 + AluJb SINE Alu 1 297 -15 710 186 68 107 chr10 72446012 72446111 -73143177 + MER77 LTR ERV1 141 242 -363 1725 178 102 5 chr10 72446195 72446616 -73142672 - L1MB4 LINE L1 0 6180 5719 2207 127 0 3 chr10 72447218 72447526 -73141762 - AluSx SINE Alu -5 307 1 5967 122 32 41 chr10 72447529 72447780 -73141508 - L1MA3 LINE L1 -1 7723 7471 2089 83 10 60 chr10 72447780 72448094 -73141194 - AluY SINE Alu -9 302 5 5967 122 32 41 chr10 72448094 72449206 -73140082 - L1MA3 LINE L1 -253 7471 6384 2283 117 21 27 chr10 72449206 72449581 -73139707 - THE1C LTR MaLR 0 375 3 5967 122 32 41 chr10 72449581 72449781 -73139507 - L1MA3 LINE L1 -1340 6384 6184 * 10434 151 48 24 chr10 72449775 72450331 -73138957 - L1MA3 LINE L1 -3608 3957 3416 1551 171 16 0 chr10 72450331 72450577 -73138711 - AluJo SINE Alu -14 298 49 10434 151 48 24 chr10 72450577 72450989 -73138299 - L1MA3 LINE L1 -4149 3416 3016 2295 92 10 19 chr10 72450989 72451303 -73137985 - AluSq SINE Alu -2 311 1 10434 151 48 24 chr10 72451303 72452328 -73136960 - L1MA3 LINE L1 -4549 3016 1892 2311 124 0 3 chr10 72452328 72452643 -73136645 - 7SLRNA srpRNA srpRNA -6 314 1 10434 151 48 24 chr10 72452643 72453023 -73136265 - L1MA3 LINE L1 -5673 1892 1523 788 119 137 24 chr10 72453052 72453220 -73136068 - LTR8A LTR ERV1 -97 630 444 24 0 0 0 chr10 72453221 72453245 -73136043 + AT_rich Low_complexity Low_complexity 1 24 0 892 147 13 0 chr10 72453293 72453443 -73135845 + L1MB2 LINE L1 5633 5784 -387 3318 118 9 93 chr10 72453443 72453566 -73135722 - Tigger1 DNA MER2_type -1 2417 2285 1811 161 0 20 chr10 72453566 72453865 -73135423 + AluSx SINE Alu 3 295 -17 3318 118 9 93 chr10 72453865 72453911 -73135377 - Tigger1 DNA MER2_type -133 2285 2237 693 194 31 8 chr10 72453911 72454040 -73135248 - FLAM_C SINE Alu -1 132 1 3318 118 9 93 chr10 72454040 72454536 -73134752 - Tigger1 DNA MER2_type -181 2237 1807 1080 112 59 5 chr10 72455519 72455706 -73133582 - Tigger1 DNA MER2_type -634 1784 1588 1265 162 72 22 chr10 72455707 72455929 -73133359 - AluJo SINE Alu -31 281 49 8459 126 44 23 chr10 72455929 72457430 -73131858 - Tigger1 DNA MER2_type -830 1588 57 554 68 12 228 chr10 72457464 72457626 -73131662 + Tigger1 DNA MER2_type 155 281 -2137 922 114 47 7 chr10 72457634 72457783 -73131505 + Tigger1 DNA MER2_type 1 155 -2263 * 1042 123 17 98 chr10 72457774 72458010 -73131278 + Tigger1 DNA MER2_type 2202 2418 0 1811 151 38 27 chr10 72458011 72458376 -73130912 + L1MB2 LINE L1 5801 6169 -2 288 189 0 0 chr10 72458510 72458563 -73130725 - L1MC4a LINE L1 -1900 5908 5856 991 270 60 25 chr10 72459592 72460092 -73129196 + MLT1H LTR MaLR 1 549 0 322 246 58 22 chr10 72460092 72460230 -73129058 - L1MEd LINE L1 -5881 238 96 255 167 0 0 chr10 72460379 72460421 -73128867 - MER5B DNA MER1_type 0 178 137 2117 129 0 0 chr10 72460448 72460735 -73128553 + AluSx SINE Alu 1 287 -25 2352 88 0 16 chr10 72460971 72461278 -73128010 - AluSc SINE Alu -7 302 1 1905 102 0 44 chr10 72462109 72462424 -73126864 - AluSx SINE Alu -11 301 1 1026 258 99 35 chr10 72462424 72463083 -73126205 + L1ME3 LINE L1 3364 4064 -2082 720 236 134 68 chr10 72463233 72463622 -73125666 + L1ME3 LINE L1 4269 4714 -1432 2589 62 3 0 chr10 72463622 72463929 -73125359 - AluSp SINE Alu -3 310 3 720 236 134 68 chr10 72463929 72464152 -73125136 + L1ME3 LINE L1 4714 4921 -1225 5760 189 98 28 chr10 72464155 72465120 -73124168 + L1MB3 LINE L1 20 1116 -5268 2655 17 0 10 chr10 72465120 72465421 -73123867 + AluYa5 SINE Alu 1 298 -13 5760 189 98 28 chr10 72465421 72465860 -73123428 + L1MB3 LINE L1 1116 1523 -4861 1916 188 55 37 chr10 72465846 72466163 -73123125 + L1MB3 LINE L1 3969 4279 -2103 * 2271 103 3 0 chr10 72466163 72466464 -73122824 + AluSp SINE Alu 2 303 -10 1916 188 55 37 chr10 72466464 72466853 -73122435 + L1MB3 LINE L1 4279 4820 -1562 2148 106 3 0 chr10 72466853 72467179 -73122109 + AluSp SINE Alu 1 327 0 4519 176 28 28 chr10 72467183 72468363 -73120925 + L1MB3 LINE L1 5229 6410 -9 1028 279 112 27 chr10 72468371 72469334 -73119954 + L1ME3 LINE L1 4910 5959 -203 1113 180 22 40 chr10 72469662 72469890 -73119398 + AluJo SINE Alu 87 310 -2 1862 153 3 3 chr10 72470744 72471032 -73118256 - AluJo SINE Alu -24 288 1 1463 167 16 19 chr10 72471107 72471198 -73118090 + AluSq SINE Alu 47 137 -176 2175 93 7 0 chr10 72471198 72471489 -73117799 + AluY SINE Alu 1 293 -18 1463 167 16 19 chr10 72471489 72471655 -73117633 + AluSq SINE Alu 137 303 -10 22 70 0 0 chr10 72471656 72471699 -73117589 + AT_rich Low_complexity Low_complexity 1 43 0 400 246 42 124 chr10 72471876 72472206 -73117082 - L1MC5 LINE L1 -50 7911 7609 2115 123 0 3 chr10 72472281 72472573 -73116715 + AluSx SINE Alu 5 295 -17 258 113 28 14 chr10 72472574 72472645 -73116643 + (TA)n Simple_repeat Simple_repeat 1 72 0 1119 225 77 84 chr10 72472691 72473379 -73115909 - L1MC5 LINE L1 -743 7218 6542 1398 180 21 42 chr10 72473542 72473825 -73115463 + AluJo SINE Alu 18 294 -18 2166 133 0 3 chr10 72473845 72474147 -73115141 + AluSx SINE Alu 1 301 -11 278 147 53 0 chr10 72474300 72474375 -73114913 + (TA)n Simple_repeat Simple_repeat 1 79 0 2072 91 10 13 chr10 72474379 72474677 -73114611 - AluSg SINE Alu -13 297 1 764 216 167 26 chr10 72474772 72474797 -73114491 - L1MC5 LINE L1 -230 5891 5871 1957 140 7 3 chr10 72474797 72475104 -73114184 + AluSx SINE Alu 1 308 -4 764 216 167 26 chr10 72475104 72475409 -73113879 - L1MC5 LINE L1 -250 5871 5611 229 238 60 48 chr10 72475433 72475517 -73113771 - L1MC5 LINE L1 -1564 4582 4498 445 93 80 13 chr10 72476112 72476187 -73113101 - MADE1 DNA Mariner 0 80 1 1923 135 7 7 chr10 72476400 72476689 -73112599 - AluSx SINE Alu -21 291 3 629 295 32 73 chr10 72479139 72479576 -73109712 + L2 LINE L2 2153 2571 -743 2190 104 7 17 chr10 72479797 72480096 -73109192 - AluSg SINE Alu -14 296 1 335 313 216 42 chr10 72480177 72480673 -73108615 + L2 LINE L2 2687 3261 -11 2316 80 0 13 chr10 72480673 72480975 -73108313 + AluY SINE Alu 1 298 -13 335 313 216 42 chr10 72480975 72480990 -73108298 + L2 LINE L2 3261 3272 0 26 30 0 0 chr10 72481395 72481428 -73107860 + AT_rich Low_complexity Low_complexity 1 33 0 2424 87 0 3 chr10 72481725 72482035 -73107253 - AluSx SINE Alu -2 310 2 875 203 183 20 chr10 72482283 72482538 -73106750 + L1MC1 LINE L1 4312 4641 -1505 252 59 0 0 chr10 72482538 72482572 -73106716 + (TG)n Simple_repeat Simple_repeat 2 35 0 875 203 183 20 chr10 72482572 72482666 -73106622 + L1MC1 LINE L1 4641 4718 -1428 1745 131 22 55 chr10 72483674 72483986 -73105302 + AluSx SINE Alu 11 312 0 23 33 0 0 chr10 72484179 72484209 -73105079 + AT_rich Low_complexity Low_complexity 1 30 0 410 290 97 11 chr10 72484575 72484751 -73104537 + L2 LINE L2 3117 3307 -6 21 36 0 0 chr10 72485113 72485141 -73104147 + AT_rich Low_complexity Low_complexity 1 28 0 2302 107 3 0 chr10 72485249 72485558 -73103730 + AluSg SINE Alu 1 310 0 23 33 0 0 chr10 72485575 72485605 -73103683 + AT_rich Low_complexity Low_complexity 1 30 0 2182 87 28 3 chr10 72486659 72486947 -73102341 - AluSg1 SINE Alu -14 295 1 1878 160 7 0 chr10 72486983 72487283 -73102005 + AluJb SINE Alu 1 302 -10 2051 129 0 7 chr10 72488201 72488503 -73100785 + AluSg SINE Alu 1 300 -10 1920 143 0 20 chr10 72489712 72490012 -73099276 + AluSx SINE Alu 6 299 -13 235 313 231 24 chr10 72490443 72490651 -73098637 + L3 LINE CR1 1310 1560 -17 225 289 66 0 chr10 72491184 72491260 -73098028 - L2 LINE L2 -50 3263 3183 1399 192 52 19 chr10 72491355 72491626 -73097662 + AluJb SINE Alu 3 282 -30 210 37 0 0 chr10 72491631 72491658 -73097630 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 230 194 42 56 chr10 72492009 72492081 -73097207 + L1ME3A LINE L1 6094 6164 -6 * 5389 157 46 27 chr10 72492074 72492587 -73096701 + L1MC1 LINE L1 5175 5677 -656 1934 149 20 3 chr10 72492587 72492888 -73096400 - AluJb SINE Alu -6 306 1 5389 157 46 27 chr10 72492888 72493506 -73095782 + L1MC1 LINE L1 5677 6328 -5 1194 248 157 45 chr10 72493533 72494016 -73095272 + L1MC4a LINE L1 5431 5967 -1841 760 167 77 2 chr10 72494050 72494282 -73095006 + AluSg SINE Alu 1 305 -7 1528 200 32 0 chr10 72494305 72494590 -73094698 + AluJb SINE Alu 4 297 -15 1492 174 57 7 chr10 72494593 72494874 -73094414 + AluSx SINE Alu 1 295 -17 25 31 0 0 chr10 72495019 72495051 -73094237 + AT_rich Low_complexity Low_complexity 1 32 0 193 207 69 52 chr10 72495622 72495680 -73093608 - MIR SINE MIR -2 260 202 180 77 0 0 chr10 72495770 72495796 -73093492 + (A)n Simple_repeat Simple_repeat 1 26 0 2477 54 0 47 chr10 72496010 72496327 -73092961 - AluY SINE Alu -9 302 1 1854 118 77 3 chr10 72496350 72496637 -73092651 - AluJb SINE Alu -4 308 1 3604 191 91 25 chr10 72496862 72497764 -73091524 - Looper DNA T2_type -278 1280 319 1121 212 0 0 chr10 72497764 72497967 -73091321 + MER82 DNA MER2_type 2 204 -449 822 246 26 39 chr10 72497962 72497979 -73091309 + MER82 DNA MER2_type 332 348 -305 * 1640 164 54 0 chr10 72497979 72498259 -73091029 - AluJb SINE Alu -17 295 1 822 246 26 39 chr10 72498259 72498473 -73090815 + MER82 DNA MER2_type 348 560 -93 1763 125 39 18 chr10 72499019 72499300 -73089988 - AluSx SINE Alu -13 299 13 36 40 0 0 chr10 72499389 72499439 -73089849 + AT_rich Low_complexity Low_complexity 1 50 0 1486 119 13 0 chr10 72499581 72499807 -73089481 - AluSg/x SINE Alu 0 310 82 356 231 127 30 chr10 72500171 72500305 -73088983 - MIR SINE MIR -4 258 112 2159 99 17 3 chr10 72500424 72500716 -73088572 - AluSx SINE Alu -16 296 1 186 350 67 8 chr10 72501018 72501138 -73088150 - L2 LINE L2 -5 3267 3141 202 312 21 21 chr10 72501437 72501530 -73087758 - MIR SINE MIR -128 134 42 1902 85 0 0 chr10 72502021 72502257 -73087031 + AluSg SINE Alu 10 245 -65 1694 145 28 4 chr10 72502392 72502647 -73086641 - AluSx SINE Alu -51 261 1 208 313 62 0 chr10 72502933 72502997 -73086291 + L2 LINE L2 3202 3269 -3 223 277 0 0 chr10 72503182 72503229 -73086059 - MIR SINE MIR -10 252 206 839 97 0 9 chr10 72503235 72503349 -73085939 - AluSc SINE Alu -12 297 185 450 284 52 0 chr10 72503353 72503487 -73085801 - MIR SINE MIR -90 172 32 270 271 109 35 chr10 72503529 72503758 -73085530 - L1MC4a LINE L1 -1693 6115 5870 386 323 74 4 chr10 72503832 72504089 -73085199 - L1MC4a LINE L1 -1487 4659 4385 504 147 5 38 chr10 72504106 72504290 -73084998 + (TATAA)n Simple_repeat Simple_repeat 2 179 0 671 153 14 14 chr10 72504312 72504602 -73084686 + (TATAA)n Simple_repeat Simple_repeat 1 290 0 184 321 179 33 chr10 72504648 72504832 -73084456 + MIR SINE MIR 52 262 0 1961 131 0 56 chr10 72504865 72505185 -73084103 - AluSg SINE Alu -8 302 1 2162 84 0 0 chr10 72505932 72506207 -73083081 + AluY SINE Alu 35 309 -2 2401 90 0 6 chr10 72506243 72506555 -73082733 + AluSx SINE Alu 1 310 -2 2291 86 3 25 chr10 72507119 72507433 -73081855 + AluSg SINE Alu 1 307 -3 1892 148 7 7 chr10 72507865 72508155 -73081133 - AluSg SINE Alu -20 290 1 2110 118 0 3 chr10 72508303 72508590 -73080698 + AluSq SINE Alu 1 286 -27 1940 152 13 7 chr10 72508608 72508917 -73080371 + AluSx SINE Alu 1 311 -1 2029 131 0 23 chr10 72508919 72509267 -73080021 + AluSx SINE Alu 1 341 0 321 245 83 36 chr10 72509283 72509338 -73079950 + L1ME4a LINE L1 5695 5746 -375 2129 116 3 13 chr10 72509338 72509641 -73079647 + AluSg SINE Alu 1 300 -10 321 245 83 36 chr10 72509641 72509777 -73079511 + L1ME4a LINE L1 5746 5895 -226 21 57 0 0 chr10 72510017 72510052 -73079236 + AT_rich Low_complexity Low_complexity 1 35 0 1448 177 79 4 chr10 72510237 72510514 -73078774 + AluJb SINE Alu 1 298 -14 1615 178 0 20 chr10 72512718 72512849 -73076439 + AluJo SINE Alu 8 140 -172 2328 101 0 7 chr10 72512849 72513156 -73076132 + AluSx SINE Alu 1 305 -7 1615 178 0 20 chr10 72513156 72513328 -73075960 + AluJo SINE Alu 140 305 -7 456 252 55 36 chr10 72513425 72513603 -73075685 + MIR SINE MIR 22 206 -56 2122 100 0 0 chr10 72514408 72514722 -73074566 + AluY SINE Alu 1 314 0 2315 104 3 0 chr10 72514972 72515281 -73074007 + AluSq SINE Alu 1 310 -3 23 33 0 0 chr10 72517473 72517503 -73071785 + AT_rich Low_complexity Low_complexity 1 30 0 315 213 27 158 chr10 72519417 72519600 -73069688 + L1M2 LINE L1 808 966 -5883 226 302 0 40 chr10 72519857 72519983 -73069305 + G-rich Low_complexity Low_complexity 5 125 0 21 0 0 0 chr10 72520063 72520084 -73069204 + GC_rich Low_complexity Low_complexity 1 21 0 1729 133 93 4 chr10 72520741 72521048 -73068240 - AluSx SINE Alu 0 312 1 1839 163 93 34 chr10 72521119 72521488 -73067800 - MLT1C LTR MaLR 0 467 66 2365 63 3 13 chr10 72521488 72521788 -73067500 + AluSp SINE Alu 1 297 -16 1839 163 93 34 chr10 72521788 72521859 -73067429 - MLT1C LTR MaLR -401 66 1 1670 148 84 3 chr10 72521987 72522271 -73067017 - AluJb SINE Alu -5 307 1 199 337 168 0 chr10 72523061 72523156 -73066132 + MIR SINE MIR 152 262 0 23 0 0 0 chr10 72523260 72523283 -73066005 + AT_rich Low_complexity Low_complexity 1 23 0 430 200 116 26 chr10 72523383 72523538 -73065750 + L2 LINE L2 2995 3163 -150 512 261 36 12 chr10 72523587 72523752 -73065536 + L2 LINE L2 3128 3296 -17 1740 167 3 13 chr10 72523760 72524072 -73065216 + AluJb SINE Alu 1 309 -3 234 273 0 0 chr10 72524099 72524165 -73065123 + L1ME LINE L1 5533 5598 -523 267 81 0 0 chr10 72524277 72524314 -73064974 - L2 LINE L2 -4 3309 3273 2284 119 0 0 chr10 72524426 72524738 -73064550 + AluSq SINE Alu 1 312 -1 26 0 0 0 chr10 72524758 72524784 -73064504 + AT_rich Low_complexity Low_complexity 1 26 0 1169 203 75 80 chr10 72525450 72525842 -73063446 - MLT1C LTR MaLR 0 467 76 1988 140 31 34 chr10 72525842 72526191 -73063097 - MER7A DNA MER2_type 0 346 1 1169 203 75 80 chr10 72526191 72526262 -73063026 - MLT1C LTR MaLR -391 76 6 963 78 47 88 chr10 72526593 72526786 -73062502 - MLT1B LTR MaLR -204 186 2 2327 103 0 0 chr10 72526831 72527131 -73062157 + AluSx SINE Alu 1 300 -12 2053 111 3 42 chr10 72529340 72529647 -73059641 + AluSx SINE Alu 1 295 -17 21 71 0 0 chr10 72529657 72529699 -73059589 + AT_rich Low_complexity Low_complexity 1 42 0 2347 94 3 0 chr10 72529779 72530076 -73059212 - AluSg SINE Alu -12 298 1 232 297 182 30 chr10 72530605 72530770 -73058518 + L2 LINE L2 2551 2740 -574 335 295 123 51 chr10 72530808 72531140 -73058148 + L2 LINE L2 2856 3211 -61 1595 123 13 4 chr10 72531237 72531504 -73057784 - AluSx SINE Alu 0 314 46 234 337 59 10 chr10 72531987 72532088 -73057200 + L2 LINE L2 3155 3260 -12 274 341 12 12 chr10 72532114 72532199 -73057089 + L2 LINE L2 3183 3267 -5 1337 166 35 39 chr10 72533389 72533673 -73055615 - L1MB8 LINE L1 -6 6172 5890 1997 153 0 7 chr10 72533678 72533978 -73055310 - AluSx SINE Alu -14 298 1 227 31 31 0 chr10 72533978 72534010 -73055278 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 2203 65 0 14 chr10 72534012 72534291 -73054997 - AluY SINE Alu -36 275 1 2305 95 0 7 chr10 72534817 72535111 -73054177 - AluSx SINE Alu -20 292 1 247 208 0 0 chr10 72535966 72536019 -73053269 + (TA)n Simple_repeat Simple_repeat 2 54 0 1934 149 7 3 chr10 72536040 72536342 -73052946 - AluJb SINE Alu -9 303 1 805 228 0 0 chr10 72536593 72536742 -73052546 + FRAM SINE Alu 12 160 -16 2332 95 0 13 chr10 72536855 72537161 -73052127 + AluSq SINE Alu 1 302 -11 361 298 48 80 chr10 72537378 72537566 -73051722 - MIR SINE MIR -30 232 51 763 179 0 35 chr10 72537679 72537824 -73051464 - AluJo SINE Alu -172 140 1 3364 131 20 52 chr10 72537992 72538103 -73051185 - MER41B LTR ERV1 -7 628 515 2269 78 0 60 chr10 72538103 72538434 -73050854 + AluY SINE Alu 1 311 0 3364 131 20 52 chr10 72538434 72538900 -73050388 - MER41B LTR ERV1 -120 515 72 2312 81 13 13 chr10 72538900 72539208 -73050080 - AluSq SINE Alu -5 308 1 3364 131 20 52 chr10 72539208 72539278 -73050010 - MER41B LTR ERV1 -563 72 1 1882 139 4 0 chr10 72539426 72539700 -73049588 + AluSx SINE Alu 1 275 -37 1498 170 7 22 chr10 72539740 72540011 -73049277 + AluJb SINE Alu 33 299 -13 1326 155 8 19 chr10 72540329 72540587 -73048701 + L1MB3 LINE L1 5921 6175 -8 240 353 35 0 chr10 72540873 72540958 -73048330 + MIR3 SINE MIR 73 160 -48 1833 101 0 0 chr10 72540961 72541198 -73048090 + AluSg SINE Alu 36 272 -38 30 0 0 0 chr10 72542111 72542141 -73047147 + AT_rich Low_complexity Low_complexity 1 30 0 793 184 126 11 chr10 72542163 72542337 -73046951 - MIR SINE MIR -11 251 58 2187 117 0 0 chr10 72542608 72542899 -73046389 + AluSx SINE Alu 1 291 -21 2196 97 10 0 chr10 72543208 72543498 -73045790 + AluSq SINE Alu 1 293 -20 185 65 32 0 chr10 72543988 72544019 -73045269 + (TTG)n Simple_repeat Simple_repeat 1 32 0 1518 108 0 23 chr10 72544082 72544296 -73044992 + AluSg/x SINE Alu 84 292 -18 315 281 166 29 chr10 72544569 72544708 -73044580 + MIR SINE MIR 7 164 -98 201 216 165 62 chr10 72544786 72544883 -73044405 + MIR SINE MIR 120 226 -36 228 234 0 0 chr10 72545618 72545665 -73043623 + L2 LINE L2 3267 3313 0 194 312 94 65 chr10 72545702 72545840 -73043448 - L2 LINE L2 -13 3300 3159 295 287 80 16 chr10 72546109 72546360 -73042928 - L1M4 LINE L1 -3733 2413 2147 1921 133 17 23 chr10 72546767 72547069 -73042219 - AluJb SINE Alu -9 303 4 703 284 25 2 chr10 72547135 72547397 -73041891 - HAL1b LINE L1 -807 541 319 2214 115 0 0 chr10 72548312 72548598 -73040690 + AluSq SINE Alu 1 286 -27 465 314 120 16 chr10 72548618 72548809 -73040479 + MIR SINE MIR 46 256 -6 2313 109 3 0 chr10 72549423 72549727 -73039561 - AluSx SINE Alu -7 305 1 813 175 145 48 chr10 72549801 72550029 -73039259 + MIR SINE MIR 13 262 0 23 33 0 0 chr10 72551840 72551870 -73037418 + AT_rich Low_complexity Low_complexity 1 30 0 2074 116 6 31 chr10 72551976 72552295 -73036993 - AluSx SINE Alu -1 311 1 389 229 124 19 chr10 72553024 72553129 -73036159 + L2 LINE L2 3198 3313 0 2074 131 3 6 chr10 72553353 72553665 -73035623 - AluSx SINE Alu -1 311 1 314 123 18 0 chr10 72554882 72554939 -73034349 + CT-rich Low_complexity Low_complexity 2 59 0 1923 165 0 3 chr10 72558058 72558355 -73030933 + AluJo SINE Alu 1 296 -16 1634 150 19 12 chr10 72558383 72558703 -73030585 - L1MA9 LINE L1 0 6312 5991 2224 101 10 23 chr10 72558981 72559289 -73029999 - AluSq SINE Alu -5 308 5 2259 117 0 0 chr10 72559625 72559925 -73029363 + AluSx SINE Alu 5 304 -8 1780 266 148 18 chr10 72559956 72560822 -73028466 + L2 LINE L2 2343 3313 0 33 97 0 0 chr10 72560853 72560956 -73028332 + AT_rich Low_complexity Low_complexity 1 103 0 449 269 36 9 chr10 72561005 72561154 -73028134 - MIR SINE MIR -63 145 21 1646 127 0 0 chr10 72561182 72561410 -73027878 + AluSq SINE Alu 85 312 -1 2310 103 0 13 chr10 72561582 72561884 -73027404 + AluSq SINE Alu 1 298 -15 207 289 164 90 chr10 72561938 72562250 -73027038 - L2 LINE L2 -12 3260 2926 199 219 50 33 chr10 72562343 72562408 -73026880 + MIR SINE MIR 89 147 -61 31 0 0 0 chr10 72562422 72562453 -73026835 + AT_rich Low_complexity Low_complexity 1 31 0 666 249 144 26 chr10 72562455 72562684 -73026604 - MIR SINE MIR 0 262 7 445 341 92 14 chr10 72562900 72563117 -73026171 - MIR SINE MIR -7 255 22 1692 187 7 7 chr10 72563194 72563494 -73025794 + AluJo SINE Alu 1 300 -12 459 0 0 0 chr10 72563522 72563573 -73025715 + (GGAA)n Simple_repeat Simple_repeat 2 52 0 294 237 151 0 chr10 72563916 72564009 -73025279 - L1ME LINE L1 -342 5779 5673 2110 111 0 4 chr10 72564030 72564352 -73024936 - AluSq SINE Alu 0 325 5 281 184 79 13 chr10 72564726 72564802 -73024486 + MER117 DNA MER1_type 1 81 -116 1831 162 3 0 chr10 72565645 72565935 -73023353 + AluJb SINE Alu 5 295 -17 1291 187 3 41 chr10 72567117 72567264 -73022024 - Charlie5 DNA MER1_type 0 2624 2491 2257 84 0 0 chr10 72567264 72567580 -73021708 + AluSp SINE Alu 1 316 0 1291 187 3 41 chr10 72567580 72567725 -73021563 - Charlie5 DNA MER1_type -133 2491 2342 1988 117 0 17 chr10 72567737 72568028 -73021260 + AluSx SINE Alu 1 286 -26 2161 69 0 35 chr10 72568039 72568328 -73020960 + AluY SINE Alu 1 279 -32 375 23 0 0 chr10 72568328 72568372 -73020916 + (TAAA)n Simple_repeat Simple_repeat 3 46 0 613 154 0 0 chr10 72568373 72568464 -73020824 - Charlie5 DNA MER1_type -2521 91 1 559 203 126 0 chr10 72568701 72568844 -73020444 + MER69A DNA AcHobo 7 167 -10 333 260 87 10 chr10 72569264 72569368 -73019920 + L2 LINE L2 3155 3266 -6 236 330 80 27 chr10 72570159 72570271 -73019017 - L2 LINE L2 -18 3295 3178 237 347 97 23 chr10 72570704 72570880 -73018408 - L2 LINE L2 -337 2977 2789 25 0 0 0 chr10 72570911 72570936 -73018352 + AT_rich Low_complexity Low_complexity 1 25 0 1878 112 7 66 chr10 72571645 72571949 -73017339 - AluSx SINE Alu -26 286 1 2475 77 0 26 chr10 72571964 72572277 -73017011 - AluSg SINE Alu -5 305 1 814 300 102 54 chr10 72573148 72573628 -73015660 - L2 LINE L2 0 3313 2811 638 181 24 0 chr10 72573710 72573853 -73015435 + MER5A DNA MER1_type 1 146 -43 240 256 67 11 chr10 72573856 72573946 -73015342 + L1MC5 LINE L1 7833 7927 -34 725 283 148 29 chr10 72573969 72574382 -73014906 - L1ME3A LINE L1 -223 5947 5486 1126 167 14 37 chr10 72574382 72574597 -73014691 - MER46A DNA MER2_type -25 211 2 1263 229 97 137 chr10 72574601 72574822 -73014466 - L1ME3A LINE L1 -677 5485 5257 2415 75 0 26 chr10 72574822 72575128 -73014160 + AluSq SINE Alu 1 298 -15 1263 229 97 137 chr10 72575128 72575751 -73013537 - L1ME3A LINE L1 -905 5257 4610 2320 109 0 0 chr10 72575751 72576063 -73013225 + AluSx SINE Alu 1 312 0 1263 229 97 137 chr10 72576063 72576191 -73013097 - L1ME3A LINE L1 -1552 4610 4478 757 227 0 0 chr10 72576191 72576323 -73012965 - FRAM SINE Alu -45 131 1 1263 229 97 137 chr10 72576323 72577092 -73012196 - L1ME3A LINE L1 -1684 4478 3688 585 341 70 11 chr10 72577276 72577560 -73011728 - L2 LINE L2 -1192 2122 1822 2130 135 3 0 chr10 72577666 72577969 -73011319 - AluSx SINE Alu -8 304 1 809 220 44 0 chr10 72578024 72578183 -73011105 - MER69A DNA AcHobo -7 170 5 394 196 64 146 chr10 72578801 72579020 -73010268 - L2 LINE L2 -1 3312 3112 2269 107 0 0 chr10 72579159 72579449 -73009839 + AluSc SINE Alu 1 290 -19 29 0 0 0 chr10 72579449 72579478 -73009810 + AT_rich Low_complexity Low_complexity 1 29 0 2156 114 3 3 chr10 72579581 72579897 -73009391 - AluSx SINE Alu 0 316 1 460 252 57 96 chr10 72580352 72580634 -73008654 - L2 LINE L2 -3 3310 3040 231 129 48 32 chr10 72581526 72581588 -73007700 - HAL1 LINE L1 -122 2385 2323 5909 165 65 51 chr10 72581588 72582739 -73006549 - Charlie1a DNA MER1_type -1306 1455 280 2120 127 13 0 chr10 72582739 72583046 -73006242 - AluSx SINE Alu -1 311 1 5909 165 65 51 chr10 72583046 72583270 -73006018 - Charlie1a DNA MER1_type -2481 280 61 709 299 80 46 chr10 72583297 72583795 -73005493 - HAL1 LINE L1 -177 2330 1816 795 261 56 62 chr10 72583849 72584205 -73005083 - HAL1 LINE L1 -2149 358 5 1254 281 71 13 chr10 72584440 72584892 -73004396 - L2 LINE L2 -7 3306 2829 315 383 37 21 chr10 72585213 72585401 -73003887 - L2 LINE L2 -228 3044 2854 1635 165 18 4 chr10 72585441 72585713 -73003575 + AluJb SINE Alu 7 282 -30 2312 101 0 0 chr10 72585733 72586030 -73003258 + AluSc SINE Alu 1 297 -12 244 231 13 51 chr10 72586371 72586449 -73002839 - MLT1C LTR MaLR -390 77 3 1159 258 87 4 chr10 72586455 72586910 -73002378 - L1MC4a LINE L1 -1878 5930 5403 1115 249 94 65 chr10 72587803 72588377 -73000911 - L2 LINE L2 0 3313 2707 2189 116 0 0 chr10 72588377 72588697 -73000591 - AluSx SINE Alu 0 312 3 1115 249 94 65 chr10 72588697 72588782 -73000506 - L2 LINE L2 -606 2707 2626 195 344 16 0 chr10 72589063 72589124 -73000164 + L2 LINE L2 3252 3313 0 324 270 54 27 chr10 72589536 72589647 -72999641 + MIR SINE MIR 40 153 -55 2479 67 3 0 chr10 72589668 72589967 -72999321 - AluSp SINE Alu -12 301 2 252 86 0 0 chr10 72590287 72590322 -72998966 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 207 362 109 23 chr10 72590834 72591008 -72998280 + L2 LINE L2 2848 3036 -236 595 303 52 3 chr10 72591365 72591568 -72997720 - MLT1J LTR MaLR -243 215 31 583 143 18 77 chr10 72591722 72591790 -72997498 - MIR SINE MIR -38 224 167 2076 147 0 7 chr10 72591790 72592097 -72997191 - AluSx SINE Alu -3 309 5 583 143 18 77 chr10 72592097 72592171 -72997117 - MIR SINE MIR -95 167 90 21 36 0 0 chr10 72592964 72592992 -72996296 + AT_rich Low_complexity Low_complexity 1 28 0 1634 174 22 7 chr10 72593589 72593864 -72995424 + AluJo SINE Alu 2 280 -32 835 144 8 0 chr10 72594118 72594243 -72995045 - FLAM_C SINE Alu -17 126 1 443 272 22 22 chr10 72595261 72595397 -72993891 - MIR3 SINE MIR -40 168 33 845 186 181 16 chr10 72595593 72595781 -72993507 + MER20 DNA MER1_type 1 219 0 3095 103 61 8 chr10 72596487 72597039 -72992249 - MER4B LTR ERV1 -7 772 27 1988 126 11 7 chr10 72597267 72597579 -72991709 - AluSq SINE Alu 0 313 1 2053 121 4 0 chr10 72597583 72597929 -72991359 - AluSx SINE Alu 0 347 1 2041 127 0 3 chr10 72599542 72599866 -72989422 + AluSx SINE Alu 1 323 0 23 0 0 0 chr10 72602128 72602151 -72987137 + AT_rich Low_complexity Low_complexity 1 23 0 2001 139 0 25 chr10 72602196 72602513 -72986775 + AluJb SINE Alu 1 309 -3 882 148 0 186 chr10 72602724 72602961 -72986327 + 7SK RNA RNA 1 193 0 1010 98 0 0 chr10 72603803 72603935 -72985353 - AluSg/x SINE Alu -17 295 164 589 271 37 68 chr10 72603945 72604056 -72985232 - L1ME LINE L1 -459 5662 5549 561 269 8 8 chr10 72604056 72604190 -72985098 + MER94 DNA DNA 1 134 0 589 271 37 68 chr10 72604190 72604399 -72984889 - L1ME LINE L1 -572 5549 5352 414 209 86 36 chr10 72604594 72604733 -72984555 + L1ME4a LINE L1 5962 6107 -14 809 138 29 0 chr10 72604739 72604877 -72984411 - L1MA8 LINE L1 -3 6288 6147 2011 116 3 70 chr10 72605024 72605353 -72983935 + AluSx SINE Alu 2 308 -4 2184 115 0 3 chr10 72605531 72605826 -72983462 + AluSx SINE Alu 1 294 -18 2157 107 0 60 chr10 72606111 72606429 -72982859 + AluSq SINE Alu 1 299 -14 2217 113 3 16 chr10 72606778 72607087 -72982201 + AluSx SINE Alu 1 305 -7 760 168 0 8 chr10 72607571 72607690 -72981598 + FLAM_C SINE Alu 1 118 -15 2640 113 49 78 chr10 72607712 72607920 -72981368 - LTR26E LTR ERV1 -148 474 262 1642 171 39 4 chr10 72607920 72608200 -72981088 + AluJo SINE Alu 1 290 -22 2640 113 49 78 chr10 72608200 72608242 -72981046 - LTR26E LTR ERV1 -360 262 220 2358 63 0 11 chr10 72608242 72608554 -72980734 + AluY SINE Alu 1 309 0 2640 113 49 78 chr10 72608554 72608789 -72980499 - LTR26E LTR ERV1 -402 220 1 539 298 78 29 chr10 72608789 72608994 -72980294 - MLT1L LTR MaLR -381 234 20 1952 159 77 37 chr10 72608998 72609376 -72979912 - MSTD LTR MaLR -3 393 1 2265 95 3 0 chr10 72610068 72610363 -72978925 + AluSx SINE Alu 1 296 -16 31 26 0 0 chr10 72610991 72611029 -72978259 + AT_rich Low_complexity Low_complexity 1 38 0 1752 142 10 36 chr10 72611644 72611946 -72977342 + AluJo SINE Alu 1 294 -18 1660 227 25 11 chr10 72613304 72613657 -72975631 - MER4D LTR ERV1 0 903 546 291 212 0 0 chr10 72613658 72613726 -72975562 - MER4E LTR ERV1 -592 280 105 1277 122 6 0 chr10 72613738 72613918 -72975370 + AluSg/x SINE Alu 131 311 -1 327 162 18 144 chr10 72613919 72613961 -72975327 - MER4E LTR ERV1 -669 97 51 2330 75 0 47 chr10 72613961 72614279 -72975009 + AluY SINE Alu 1 303 -8 327 162 18 144 chr10 72614279 72614347 -72974941 - MER4E LTR ERV1 -715 51 1 1189 217 83 102 chr10 72614353 72614638 -72974650 - MLT1J LTR MaLR -4 507 235 2092 129 0 0 chr10 72614638 72614925 -72974363 - AluSg SINE Alu -13 297 11 1189 217 83 102 chr10 72614925 72615156 -72974132 - MLT1J LTR MaLR -276 235 1 202 234 0 0 chr10 72615271 72615318 -72973970 + (TA)n Simple_repeat Simple_repeat 2 48 0 362 226 346 8 chr10 72615607 72615740 -72973548 + MER5B DNA MER1_type 1 178 0 2340 113 7 0 chr10 72615764 72616074 -72973214 + AluSx SINE Alu 1 312 0 189 239 43 0 chr10 72616234 72616280 -72973008 + MER5B DNA MER1_type 1 48 -130 * 955 190 0 0 chr10 72616279 72616453 -72972835 + MER5A DNA MER1_type 16 189 0 240 287 89 79 chr10 72616482 72616583 -72972705 + MER5B DNA MER1_type 61 162 -16 499 227 288 0 chr10 72616639 72616802 -72972486 + MER63A DNA MER1_type 1 210 0 2433 126 57 3 chr10 72617015 72617381 -72971907 + MER4D LTR ERV1 190 575 -328 281 167 0 33 chr10 72617396 72617454 -72971834 + MER4E LTR ERV1 531 586 -193 941 90 8 0 chr10 72617454 72617587 -72971701 - MER41B LTR ERV1 0 635 502 1058 233 69 31 chr10 72617594 72617911 -72971377 + LTR2B LTR ERV1 148 476 -14 426 200 27 40 chr10 72617925 72618070 -72971218 + MER4D LTR ERV1 626 870 -8 1007 216 36 44 chr10 72618279 72618529 -72970759 + PABL_B LTR ERV1 419 666 -1 292 109 0 0 chr10 72619528 72619574 -72969714 + AluSp/q SINE Alu 255 300 -3 3587 49 2 0 chr10 72620979 72621410 -72967878 + Harlequin LTR ERV1 6464 6895 -1 1953 191 61 29 chr10 72621433 72621878 -72967410 + LTR2B LTR ERV1 32 490 0 306 241 126 0 chr10 72621905 72621992 -72967296 + LTR10A LTR ERV1 1 98 -511 635 183 10 0 chr10 72623792 72623896 -72965392 - FLAM_A SINE Alu -19 123 19 1429 124 5 0 chr10 72623900 72624109 -72965179 - AluSg/x SINE Alu -1 311 102 202 207 35 35 chr10 72624110 72624168 -72965120 - MIR SINE MIR -116 146 89 649 226 0 8 chr10 72624170 72624303 -72964985 + AluSg/x SINE Alu 155 286 -24 21 0 0 0 chr10 72624708 72624729 -72964559 + AT_rich Low_complexity Low_complexity 1 21 0 352 278 68 68 chr10 72625740 72625931 -72963357 + LTR16A LTR ERVL 105 295 -155 275 245 75 11 chr10 72627251 72627345 -72961943 + MIR SINE MIR 47 146 -62 222 405 30 0 chr10 72627368 72627499 -72961789 + MER5A DNA MER1_type 18 152 -37 2267 96 10 0 chr10 72628624 72628916 -72960372 + AluSp SINE Alu 1 295 -18 210 268 75 23 chr10 72629080 72629183 -72960105 - MIR SINE MIR -67 141 34 1624 104 5 5 chr10 72630071 72630291 -72958997 + AluSx SINE Alu 1 220 -92 583 143 18 77 chr10 72631218 72631292 -72957996 + MIR SINE MIR 90 154 -108 1988 147 3 10 chr10 72631292 72631598 -72957690 + AluSx SINE Alu 5 308 -4 583 143 18 77 chr10 72631598 72631666 -72957622 + MIR SINE MIR 154 224 -38 595 303 52 3 chr10 72631820 72632023 -72957265 + MLT1J LTR MaLR 31 203 -243 207 362 109 23 chr10 72632380 72632554 -72956734 - L2 LINE L2 -236 3036 2848 252 86 0 0 chr10 72633066 72633101 -72956187 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2395 80 3 26 chr10 72633421 72633734 -72955554 + AluSx SINE Alu 2 307 -5 1878 112 7 66 chr10 72633749 72634053 -72955235 + AluSx SINE Alu 1 286 -26 25 0 0 0 chr10 72634762 72634787 -72954501 + AT_rich Low_complexity Low_complexity 1 25 0 237 347 97 23 chr10 72634818 72634994 -72954294 + L2 LINE L2 2789 2977 -337 236 330 80 27 chr10 72635427 72635539 -72953749 + L2 LINE L2 3178 3295 -18 2066 131 3 6 chr10 72636584 72636896 -72952392 + AluSx SINE Alu 1 311 -1 380 229 124 19 chr10 72637120 72637225 -72952063 - L2 LINE L2 0 3313 3198 1975 125 6 34 chr10 72637954 72638274 -72951014 + AluSx SINE Alu 1 311 -1 23 33 0 0 chr10 72638380 72638410 -72950878 + AT_rich Low_complexity Low_complexity 1 30 0 806 175 145 48 chr10 72640221 72640449 -72948839 - MIR SINE MIR 0 262 13 2311 109 3 0 chr10 72640523 72640827 -72948461 + AluSx SINE Alu 1 305 -7 455 314 120 16 chr10 72641441 72641632 -72947656 - MIR SINE MIR -6 256 46 2209 115 0 0 chr10 72641652 72641938 -72947350 - AluSq SINE Alu -27 286 1 799 270 33 9 chr10 72642853 72643115 -72946173 + HAL1b LINE L1 319 1669 -807 1906 133 17 23 chr10 72643181 72643483 -72945805 + AluJb SINE Alu 4 303 -9 390 276 77 19 chr10 72643880 72644141 -72945147 + L1M4 LINE L1 2138 2413 -3733 225 234 0 0 chr10 72644585 72644632 -72944656 - L2 LINE L2 0 3313 3267 195 216 165 62 chr10 72645367 72645464 -72943824 - MIR SINE MIR -36 226 120 312 281 166 29 chr10 72645542 72645681 -72943607 - MIR SINE MIR -98 164 7 1513 108 0 23 chr10 72645954 72646168 -72943120 - AluSg/x SINE Alu -18 294 86 185 65 32 0 chr10 72646231 72646262 -72943026 + (CAA)n Simple_repeat Simple_repeat 1 32 0 2183 100 10 0 chr10 72646752 72647042 -72942246 - AluSq SINE Alu -20 293 1 747 300 104 56 chr10 72647914 72648394 -72940894 - L2 LINE L2 0 3313 2811 638 181 24 0 chr10 72648476 72648619 -72940669 + MER5A DNA MER1_type 1 146 -43 240 256 67 11 chr10 72648622 72648712 -72940576 + L1MC5 LINE L1 7833 7927 -34 725 283 148 29 chr10 72648735 72649148 -72940140 - L1ME3A LINE L1 -223 5947 5486 1126 167 14 37 chr10 72649148 72649363 -72939925 - MER46A DNA MER2_type -25 211 2 919 248 30 77 chr10 72649367 72649588 -72939700 - L1ME3A LINE L1 -677 5485 5255 2415 75 0 26 chr10 72649588 72649894 -72939394 + AluSq SINE Alu 1 298 -15 919 248 30 77 chr10 72649894 72650323 -72938965 - L1ME3A LINE L1 -907 5255 4867 256 225 155 0 chr10 72750576 72750647 -72838641 + L2 LINE L2 3227 3308 -5 1125 164 0 20 chr10 72750840 72751041 -72838247 - AluJb SINE Alu -16 296 100 423 255 41 0 chr10 72751178 72751276 -72838012 + L2 LINE L2 3198 3299 -14 1686 150 0 25 chr10 72751387 72751661 -72837627 - AluJb SINE Alu -45 267 1 2246 103 7 0 chr10 72752474 72752765 -72836523 - AluSx SINE Alu -19 293 1 546 155 57 7 chr10 72753384 72753685 -72835603 + (TA)n Simple_repeat Simple_repeat 1 316 0 2128 119 0 3 chr10 72753689 72753983 -72835305 - AluSx SINE Alu -19 293 1 1858 145 6 35 chr10 72754354 72754665 -72834623 + AluJb SINE Alu 1 302 -10 1801 183 10 7 chr10 72754917 72755217 -72834071 + AluJo SINE Alu 1 301 -11 1317 111 0 0 chr10 72755613 72755784 -72833504 - AluSp SINE Alu -22 291 121 764 100 36 0 chr10 72756202 72756312 -72832976 + AluJb SINE Alu 1 114 -198 485 241 0 14 chr10 72756313 72756458 -72832830 + GA-rich Low_complexity Low_complexity 2 144 0 431 163 0 0 chr10 72757111 72757191 -72832097 + MER116 DNA Mariner 1 80 0 623 278 148 30 chr10 72757833 72758096 -72831192 - L2 LINE L2 0 3313 3020 370 240 52 0 chr10 72758169 72758265 -72831023 + MER5C DNA MER1_type 2 102 -222 292 99 0 25 chr10 72758265 72758497 -72830791 + AluSq SINE Alu 1 298 -5 309 221 366 0 chr10 72758498 72758670 -72830618 + MER5C DNA MER1_type 90 324 0 1070 257 247 20 chr10 72758693 72759275 -72830013 - L2 LINE L2 -887 2427 1706 2072 161 0 0 chr10 72759275 72759585 -72829703 - AluSx SINE Alu -2 310 1 1070 257 247 20 chr10 72759585 72759597 -72829691 - L2 LINE L2 -1608 1706 1698 11422 141 19 33 chr10 72760410 72761379 -72827909 - L1MA4 LINE L1 -5 6295 5314 2130 101 3 17 chr10 72761379 72761666 -72827622 - AluSx SINE Alu -29 283 1 11422 141 19 33 chr10 72761666 72762381 -72826907 - L1MA4 LINE L1 -986 5314 4590 2117 151 0 0 chr10 72762381 72762693 -72826595 - AluSx SINE Alu 0 312 1 11422 141 19 33 chr10 72762693 72763633 -72825655 - L1MA4 LINE L1 -1710 4590 3694 213 39 0 0 chr10 72763633 72763659 -72825629 + (TTG)n Simple_repeat Simple_repeat 1 26 0 11422 141 19 33 chr10 72763659 72764355 -72824933 - L1MA4 LINE L1 -2606 3694 2990 378 0 0 0 chr10 72764973 72765015 -72824273 + (CA)n Simple_repeat Simple_repeat 1 42 0 30 27 0 0 chr10 72765316 72765353 -72823935 + AT_rich Low_complexity Low_complexity 1 37 0 492 266 162 0 chr10 72766800 72766954 -72822334 + MER5A DNA MER1_type 10 188 -1 1905 147 3 19 chr10 72766966 72767280 -72822008 - AluJo SINE Alu -3 309 1 2097 148 0 7 chr10 72767650 72767960 -72821328 - AluJb SINE Alu -4 308 1 249 33 0 0 chr10 72767973 72768003 -72821285 + (TCC)n Simple_repeat Simple_repeat 3 32 0 565 188 0 0 chr10 72768934 72769030 -72820258 - Tigger7 DNA MER2_type 0 2491 2396 1223 194 14 9 chr10 72769035 72769257 -72820031 - Tigger7 DNA MER2_type -290 260 38 393 268 106 0 chr10 72769773 72769896 -72819392 - MER5B DNA MER1_type -42 136 1 1802 63 21 13 chr10 72769914 72770152 -72819136 + L1PA8A LINE L1 5865 6104 -27 281 234 19 123 chr10 72771053 72771207 -72818081 + L2 LINE L2 2897 3034 -238 296 256 36 73 chr10 72771332 72771469 -72817819 + L2 LINE L2 3137 3268 -4 2406 94 0 0 chr10 72771655 72771954 -72817334 + AluSx SINE Alu 5 303 -9 2164 112 0 43 chr10 72772662 72772985 -72816303 + AluSx SINE Alu 3 311 -1 301 253 0 0 chr10 72773247 72773326 -72815962 - L1ME1 LINE L1 -273 5893 5815 2460 80 0 3 chr10 72773326 72773627 -72815661 + AluY SINE Alu 1 300 -11 1891 142 20 14 chr10 72774482 72774777 -72814511 + AluJo SINE Alu 1 297 -15 285 98 0 0 chr10 72774856 72774897 -72814391 + (CA)n Simple_repeat Simple_repeat 2 42 0 243 0 0 0 chr10 72774896 72774923 -72814365 + (GA)n Simple_repeat Simple_repeat 2 28 0 * 264 161 36 36 chr10 72774925 72774981 -72814307 - Tigger5 DNA MER2_type 0 2323 2268 * 378 161 0 0 chr10 72774935 72774991 -72814297 + Tigger5 DNA MER2_type 2268 2323 0 2278 97 13 26 chr10 72775615 72775926 -72813362 + AluSx SINE Alu 1 307 -5 242 326 64 21 chr10 72776094 72776235 -72813053 + L2 LINE L2 2904 3050 -222 224 174 22 0 chr10 72776485 72776531 -72812757 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 1951 145 0 26 chr10 72776572 72776875 -72812413 + AluSx SINE Alu 1 295 -17 455 218 36 9 chr10 72777305 72777415 -72811873 - MER5B DNA MER1_type -3 175 63 2157 120 0 0 chr10 72778151 72778455 -72810833 + AluSx SINE Alu 1 304 0 2065 134 6 13 chr10 72780854 72781168 -72808120 - AluSx SINE Alu 0 312 1 440 210 0 0 chr10 72782799 72782880 -72806408 + L2 LINE L2 3233 3313 0 351 250 53 61 chr10 72783175 72783307 -72805981 - L2 LINE L2 0 3272 3142 2240 110 10 0 chr10 72783621 72783930 -72805358 - AluSx SINE Alu 0 312 1 1203 188 53 0 chr10 72784172 72784380 -72804908 - MER20 DNA MER1_type 0 219 1 721 139 0 0 chr10 72784440 72784541 -72804747 + FLAM_C SINE Alu 23 123 -20 2256 130 0 0 chr10 72784893 72785201 -72804087 - AluSx SINE Alu -4 308 1 2174 112 3 7 chr10 72785718 72786022 -72803266 - AluSx SINE Alu -9 303 1 928 191 0 6 chr10 72786254 72786427 -72802861 + MER5B DNA MER1_type 1 172 -6 15655 111 38 13 chr10 72787254 72788033 -72801255 + Tigger1 DNA MER2_type 1 759 -1659 2516 64 0 0 chr10 72788033 72788329 -72800959 + AluY SINE Alu 1 296 -15 15655 111 38 13 chr10 72788329 72789732 -72799556 + Tigger1 DNA MER2_type 759 2250 -168 1636 166 0 10 chr10 72789732 72790046 -72799242 - AluJb SINE Alu 0 312 5 15655 111 38 13 chr10 72790046 72790220 -72799068 + Tigger1 DNA MER2_type 2250 2418 0 416 93 0 0 chr10 72791641 72791695 -72797593 - U2 snRNA snRNA -134 54 1 954 128 0 0 chr10 72791714 72791855 -72797433 - AluSg/x SINE Alu 0 312 172 2171 113 0 10 chr10 72791879 72792179 -72797109 - AluSx SINE Alu -15 297 1 29 60 0 0 chr10 72793149 72793199 -72796089 + AT_rich Low_complexity Low_complexity 1 50 0 2338 78 3 3 chr10 72793242 72793536 -72795752 + AluSc SINE Alu 1 294 -15 204 67 0 0 chr10 72794064 72794094 -72795194 + (CA)n Simple_repeat Simple_repeat 2 31 0 22 35 0 0 chr10 72794721 72794750 -72794538 + AT_rich Low_complexity Low_complexity 1 29 0 180 0 0 0 chr10 72794777 72794797 -72794491 + (T)n Simple_repeat Simple_repeat 1 20 0 367 235 107 48 chr10 72794833 72795020 -72794268 + MER88 LTR ERVL 46 243 -221 * 1473 233 121 21 chr10 72794878 72795265 -72794023 - MER74B LTR ERVL -74 548 123 1627 185 44 3 chr10 72795278 72795575 -72793713 - AluJo SINE Alu -3 309 1 6465 128 56 53 chr10 72795677 72795787 -72793501 + Tigger3b DNA MER2_type 1 109 -2919 2091 107 58 30 chr10 72795787 72796152 -72793136 + THE1C LTR MaLR 1 375 0 6465 128 56 53 chr10 72796152 72796590 -72792698 + Tigger3b DNA MER2_type 109 544 -2484 2239 123 0 0 chr10 72796590 72796891 -72792397 - AluSx SINE Alu -11 301 1 6465 128 56 53 chr10 72796891 72797568 -72791720 + Tigger3b DNA MER2_type 544 1231 0 2443 85 0 0 chr10 72797761 72798068 -72791220 + AluY SINE Alu 1 307 -4 2507 46 0 0 chr10 72798384 72798700 -72790588 + AluY SINE Alu 1 316 0 1927 163 0 7 chr10 72798754 72799061 -72790227 - AluJo SINE Alu -5 307 3 22 0 0 0 chr10 72799434 72799456 -72789832 + AT_rich Low_complexity Low_complexity 1 22 0 2405 100 3 0 chr10 72800563 72800864 -72788424 - AluSq SINE Alu -11 302 1 31 26 0 0 chr10 72801793 72801831 -72787457 + AT_rich Low_complexity Low_complexity 1 38 0 21 57 0 0 chr10 72803892 72803927 -72785361 + AT_rich Low_complexity Low_complexity 1 35 0 572 224 86 7 chr10 72805240 72805392 -72783896 - MER103 DNA DNA -1 165 2 1675 163 57 18 chr10 72805429 72805712 -72783576 + AluJb SINE Alu 1 294 -18 2240 114 7 0 chr10 72805762 72806070 -72783218 - AluSq SINE Alu -3 310 1 220 324 27 36 chr10 72806075 72806186 -72783102 - MIR SINE MIR -64 144 35 190 184 20 20 chr10 72806207 72806256 -72783032 - MIR3 SINE MIR -39 169 121 1364 159 12 12 chr10 72806594 72806839 -72782449 + AluJo SINE Alu 60 304 -8 264 30 0 0 chr10 72807185 72807218 -72782070 + (CA)n Simple_repeat Simple_repeat 2 34 0 2058 129 4 0 chr10 72807453 72807758 -72781530 - AluSx SINE Alu 0 306 1 342 222 168 54 chr10 72808174 72808341 -72780947 + MIR SINE MIR 7 192 -70 537 227 60 20 chr10 72808535 72808685 -72780603 + MIR SINE MIR 79 234 -28 2234 107 0 7 chr10 72808902 72809200 -72780088 + AluSx SINE Alu 1 296 -16 1879 263 72 25 chr10 72809501 72809939 -72779349 + MLT2E LTR ERVL 30 503 -125 2316 106 0 0 chr10 72809939 72810242 -72779046 - AluSx SINE Alu -9 303 1 1879 263 72 25 chr10 72810242 72810370 -72778918 + MLT2E LTR ERVL 503 623 -5 1787 146 3 21 chr10 72811455 72811766 -72777522 - AluJb SINE Alu 0 308 3 313 231 88 0 chr10 72811766 72811857 -72777431 - L2 LINE L2 -9 3304 3206 191 333 52 0 chr10 72812273 72812369 -72776919 + L2 LINE L2 3155 3255 -17 250 211 105 98 chr10 72813577 72813604 -72775684 + MER103 DNA DNA 24 49 -117 1887 165 23 46 chr10 72813604 72813883 -72775405 + MER2 DNA MER2_type 1 272 -72 2212 105 0 7 chr10 72813883 72814177 -72775111 - AluSx SINE Alu -20 292 1 1887 165 23 46 chr10 72814177 72814248 -72775040 + MER2 DNA MER2_type 272 343 -1 250 211 105 98 chr10 72814248 72814353 -72774935 + MER103 DNA DNA 49 157 -9 1982 135 10 19 chr10 72814425 72814905 -72774383 + AluSx SINE Alu 1 312 0 1097 236 61 58 chr10 72815210 72815277 -72774011 - MER39 LTR ERV1 0 707 642 1730 186 3 19 chr10 72815277 72815594 -72773694 + AluJo SINE Alu 1 312 0 1097 236 61 58 chr10 72815594 72815890 -72773398 - MER39 LTR ERV1 -65 642 146 1798 104 0 8 chr10 72815890 72816131 -72773157 - AluSx SINE Alu -23 289 51 1097 236 61 58 chr10 72816131 72816214 -72773074 - MER39 LTR ERV1 -561 146 65 1146 212 72 44 chr10 72816470 72816869 -72772419 + L1MC5 LINE L1 7246 7656 -300 2137 146 0 0 chr10 72816869 72817170 -72772118 + AluSx SINE Alu 1 301 -11 1622 182 3 11 chr10 72817201 72817487 -72771801 + AluJo SINE Alu 17 300 -12 701 221 48 72 chr10 72817487 72817736 -72771552 + L1MC5 LINE L1 7651 7893 -68 2231 92 4 0 chr10 72817756 72818088 -72771200 - AluSx SINE Alu 0 333 1 1527 94 103 0 chr10 72819432 72819645 -72769643 - AluSp SINE Alu -20 293 59 2219 136 0 0 chr10 72819646 72819954 -72769334 + AluSg SINE Alu 2 309 -1 2349 106 3 0 chr10 72820136 72820447 -72768841 - AluSx SINE Alu 0 312 1 263 172 0 62 chr10 72820448 72820512 -72768776 - LTR67 LTR ERVL -41 516 457 549 277 76 34 chr10 72821608 72821846 -72767442 - MIR SINE MIR -2 260 13 183 100 0 0 chr10 72822991 72823021 -72766267 + (CA)n Simple_repeat Simple_repeat 1 30 0 28 0 0 0 chr10 72823862 72823890 -72765398 + AT_rich Low_complexity Low_complexity 1 28 0 2448 83 0 0 chr10 72825402 72825702 -72763586 - AluSx SINE Alu -12 300 1 1167 253 84 86 chr10 72825793 72826389 -72762899 + MLT1G1 LTR MaLR 1 595 0 417 281 29 7 chr10 72826418 72826557 -72762731 + MIR SINE MIR 20 161 -101 2224 129 0 0 chr10 72826557 72826868 -72762420 + AluSx SINE Alu 1 311 -1 30 45 0 0 chr10 72827153 72827197 -72762091 + AT_rich Low_complexity Low_complexity 1 44 0 2252 131 0 0 chr10 72827258 72827570 -72761718 + AluSx SINE Alu 1 312 0 235 289 69 25 chr10 72827596 72827800 -72761488 + L1MC4 LINE L1 5755 5967 -1841 2791 182 180 147 chr10 72828239 72828938 -72760350 + L1MC4 LINE L1 6460 7135 -907 812 226 6 17 chr10 72828938 72829115 -72760173 + FRAM SINE Alu 1 175 -1 2791 182 180 147 chr10 72829115 72829637 -72759651 + L1MC4 LINE L1 7135 7903 -139 265 120 40 0 chr10 72829796 72829846 -72759442 - L1MB4 LINE L1 -4 6176 6125 1802 169 31 31 chr10 72829890 72829908 -72759380 - L1MB4 LINE L1 -33 6147 6130 1834 121 12 33 chr10 72829908 72830029 -72759259 - L1MA5A LINE L1 -3 6294 6172 2059 134 10 0 chr10 72830029 72830319 -72758969 - AluSx SINE Alu -19 293 1 1834 121 12 33 chr10 72830319 72830527 -72758761 - L1MA5A LINE L1 -125 6172 5972 1802 169 31 31 chr10 72830527 72830902 -72758386 - L1MB4 LINE L1 -50 6130 5742 1611 118 9 0 chr10 72830902 72831131 -72758157 + AluSg/x SINE Alu 77 307 -5 25 0 0 0 chr10 72831196 72831221 -72758067 + AT_rich Low_complexity Low_complexity 1 25 0 1353 210 101 48 chr10 72833139 72833457 -72755831 + L1ME3 LINE L1 2258 2558 -3588 2479 67 0 13 chr10 72833457 72833756 -72755532 + AluY SINE Alu 1 295 -16 1353 210 101 48 chr10 72833756 72833852 -72755436 + L1ME3 LINE L1 2558 2647 -3499 2357 127 114 5 chr10 72833852 72834238 -72755050 + MSTA LTR MaLR 1 428 0 1353 210 101 48 chr10 72834238 72834369 -72754919 + L1ME3 LINE L1 2647 2833 -3313 744 276 46 13 chr10 72834348 72834721 -72754567 + L1ME3 LINE L1 3092 3476 -2670 * 478 292 164 19 chr10 72834825 72835214 -72754074 - LTR16A LTR ERVL -5 445 3 2526 253 84 73 chr10 72835215 72835625 -72753663 + L1ME3 LINE L1 3532 3936 -2226 1586 194 14 10 chr10 72835625 72835918 -72753370 + AluJo SINE Alu 5 298 -14 2526 253 84 73 chr10 72835918 72836103 -72753185 + L1ME3 LINE L1 3936 4117 -2045 330 26 0 0 chr10 72836103 72836142 -72753146 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2121 125 0 0 chr10 72836149 72836429 -72752859 - AluSc SINE Alu -28 281 2 2526 253 84 73 chr10 72836429 72836603 -72752685 + L1ME3 LINE L1 4122 4293 -1869 2116 138 3 0 chr10 72836603 72836893 -72752395 + AluSx SINE Alu 2 292 -20 2526 253 84 73 chr10 72836893 72837005 -72752283 + L1ME3 LINE L1 4293 4402 -1760 1348 155 144 18 chr10 72837005 72837282 -72752006 - AluJo SINE Alu 0 312 1 2526 253 84 73 chr10 72837282 72837825 -72751463 + L1ME3 LINE L1 4402 4937 -1225 2049 113 3 24 chr10 72837825 72838118 -72751170 + AluSx SINE Alu 1 287 -25 2526 253 84 73 chr10 72838118 72839028 -72750260 + L1ME3 LINE L1 4937 5907 -255 2004 151 0 20 chr10 72839028 72839332 -72749956 + AluJb SINE Alu 1 298 -14 2526 253 84 73 chr10 72839332 72839530 -72749758 + L1ME3 LINE L1 5907 6101 -61 1813 133 8 4 chr10 72839552 72839811 -72749477 + AluSq SINE Alu 34 294 -15 500 0 17 0 chr10 72839811 72839871 -72749417 + (TAGA)n Simple_repeat Simple_repeat 2 62 0 602 274 39 44 chr10 72839909 72840113 -72749175 + HAL1 LINE L1 410 612 -1895 416 121 0 0 chr10 72840116 72840174 -72749114 - MLT1L LTR MaLR -369 246 189 26 0 0 0 chr10 72841384 72841410 -72747878 + AT_rich Low_complexity Low_complexity 1 26 0 815 196 0 65 chr10 72841559 72841682 -72747606 - MER5A DNA MER1_type -1 188 79 2333 101 7 3 chr10 72841682 72841988 -72747300 - AluSx SINE Alu -5 307 1 815 196 0 65 chr10 72841988 72842048 -72747240 - MER5A DNA MER1_type -110 79 17 2350 87 3 0 chr10 72843133 72843422 -72745866 + AluSx SINE Alu 4 293 -19 1196 144 0 6 chr10 72843432 72843613 -72745675 + AluSc SINE Alu 130 309 0 1649 181 66 23 chr10 72843702 72844005 -72745283 - MLT1E LTR MaLR -2 591 276 3828 96 58 25 chr10 72844028 72844271 -72745017 + MER4B LTR ERV1 1 235 -375 1237 72 24 0 chr10 72844271 72844438 -72744850 + L1PA8 LINE L1 6002 6172 0 3828 96 58 25 chr10 72844438 72844785 -72744503 + MER4B LTR ERV1 235 610 0 575 171 135 98 chr10 72844790 72844983 -72744305 - MLT1E LTR MaLR -350 243 44 678 203 77 65 chr10 72845012 72845273 -72744015 + L1MC5 LINE L1 7669 7932 -29 2296 116 3 3 chr10 72845306 72845617 -72743671 + AluSp SINE Alu 1 311 -2 1687 221 114 47 chr10 72845626 72846134 -72743154 - MLT1F LTR MaLR 0 542 1 2179 137 0 0 chr10 72846189 72846495 -72742793 + AluSx SINE Alu 1 306 -6 1896 173 0 0 chr10 72846662 72846946 -72742342 + AluJo SINE Alu 1 284 -28 613 289 84 39 chr10 72847519 72847830 -72741458 + MLT1I LTR MaLR 71 395 -14 2295 108 42 31 chr10 72847910 72848270 -72741018 + THE1B LTR MaLR 1 364 0 11865 100 3 2 chr10 72848270 72849849 -72739439 + THE1B-int LTR MaLR 1 1580 0 1922 127 43 43 chr10 72849851 72850175 -72739113 + THE1B LTR MaLR 3 326 -38 228 172 0 35 chr10 72850209 72850267 -72739021 + (CGG)n Simple_repeat Simple_repeat 2 57 0 5826 64 15 54 chr10 72850493 72851475 -72737813 + SVA Other Other 344 1404 0 422 61 0 0 chr10 72851477 72851526 -72737762 + THE1B LTR MaLR 307 355 0 1894 154 0 41 chr10 72851760 72852078 -72737210 + AluJo SINE Alu 1 305 -7 2179 119 10 0 chr10 72852272 72852567 -72736721 - AluSx SINE Alu -14 298 1 2574 48 0 0 chr10 72852893 72853186 -72736102 + AluY SINE Alu 1 293 -18 2024 130 35 0 chr10 72853312 72853597 -72735691 + AluSx SINE Alu 3 297 -15 909 114 0 15 chr10 72854226 72854358 -72734930 - FLAM_C SINE Alu -2 131 2 23 33 0 0 chr10 72854636 72854666 -72734622 + AT_rich Low_complexity Low_complexity 1 30 0 198 0 0 0 chr10 72854919 72854941 -72734347 + (TG)n Simple_repeat Simple_repeat 1 22 0 2151 110 0 4 chr10 72854941 72855222 -72734066 - AluSx SINE Alu -32 280 1 2043 147 0 6 chr10 72856843 72857156 -72732132 - AluJb SINE Alu -1 311 1 2376 108 0 0 chr10 72857258 72857563 -72731725 - AluSx SINE Alu -7 305 1 891 141 0 7 chr10 72857679 72857814 -72731474 - AluJo SINE Alu -178 134 1 1781 116 0 4 chr10 72858049 72858290 -72730998 + AluSq SINE Alu 29 268 -45 545 212 9 26 chr10 72858320 72858433 -72730855 - MER81 DNA DNA 0 114 4 252 0 0 0 chr10 72858476 72858504 -72730784 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 1938 148 11 0 chr10 72858953 72859237 -72730051 + AluSx SINE Alu 1 287 -25 640 256 130 4 chr10 72859253 72859483 -72729805 - MIR SINE MIR -1 261 3 1951 128 3 54 chr10 72860421 72860734 -72728554 + AluSx SINE Alu 1 297 -15 270 0 0 0 chr10 72860839 72860869 -72728419 + (CA)n Simple_repeat Simple_repeat 1 30 0 186 315 34 79 chr10 72860954 72861043 -72728245 + MIR SINE MIR 159 243 -19 2277 86 7 0 chr10 72861615 72861905 -72727383 + AluSp SINE Alu 5 296 -17 292 246 54 54 chr10 72863618 72863688 -72725600 + MIR SINE MIR 34 106 -156 2172 138 0 0 chr10 72863688 72863985 -72725303 - AluSx SINE Alu -15 297 1 292 246 54 54 chr10 72863985 72864044 -72725244 + MIR SINE MIR 105 163 -99 1620 171 53 0 chr10 72864054 72864335 -72724953 - AluJo SINE Alu -16 296 1 2095 106 0 0 chr10 72864904 72865177 -72724111 + AluSq SINE Alu 37 309 -4 216 184 41 0 chr10 72865359 72865408 -72723880 + L2 LINE L2 2925 2975 -338 290 217 29 14 chr10 72865509 72865578 -72723710 + MER96 DNA MER1_type? 1 70 -105 735 284 54 43 chr10 72865622 72865900 -72723388 + LTR16A LTR ERVL 59 339 -111 1476 118 0 0 chr10 72865900 72866103 -72723185 - AluSg/x SINE Alu -9 303 101 1933 167 0 0 chr10 72866386 72866686 -72722602 + AluJo SINE Alu 1 300 -12 2117 121 3 32 chr10 72866845 72867160 -72722128 + AluSx SINE Alu 1 306 -6 218 31 0 31 chr10 72867186 72867218 -72722070 + (TAAAA)n Simple_repeat Simple_repeat 2 32 0 876 164 40 0 chr10 72867898 72868050 -72721238 + AluSg/x SINE Alu 135 292 -18 481 273 122 86 chr10 72868548 72868852 -72720436 + L2 LINE L2 2958 3272 0 972 113 0 21 chr10 72869005 72869146 -72720142 + FLAM_C SINE Alu 6 143 0 1731 150 60 20 chr10 72869159 72869459 -72719829 + AluJo SINE Alu 1 312 0 789 132 0 0 chr10 72869530 72869644 -72719644 + FLAM_C SINE Alu 11 124 -19 365 239 11 0 chr10 72869659 72869751 -72719537 + L1MC4 LINE L1 7949 8041 -1 412 217 57 0 chr10 72869809 72869915 -72719373 + MIR SINE MIR 73 184 -78 333 0 0 0 chr10 72869933 72869970 -72719318 + (CA)n Simple_repeat Simple_repeat 2 38 0 2299 99 0 7 chr10 72870000 72870304 -72718984 + AluSg SINE Alu 1 302 -8 25 0 0 0 chr10 72870562 72870587 -72718701 + AT_rich Low_complexity Low_complexity 1 25 0 2134 103 11 0 chr10 72870749 72871050 -72718238 + AluSx SINE Alu 1 304 0 1804 163 3 7 chr10 72871072 72871367 -72717921 - AluSx SINE Alu -18 294 1 186 171 0 0 chr10 72871372 72871413 -72717875 + GA-rich Low_complexity Low_complexity 2 42 0 200 255 0 21 chr10 72871423 72871470 -72717818 + MIR SINE MIR 217 262 0 430 242 118 39 chr10 72871649 72871802 -72717486 + MER5A DNA MER1_type 24 188 -1 2329 98 7 0 chr10 72872066 72872371 -72716917 - AluSx SINE Alu -5 307 1 1907 135 29 29 chr10 72873743 72874055 -72715233 + AluJo SINE Alu 1 312 0 1948 108 0 41 chr10 72874231 72874559 -72714729 - AluSx SINE Alu 0 318 3 22 0 0 0 chr10 72874663 72874685 -72714603 + AT_rich Low_complexity Low_complexity 1 22 0 545 90 0 0 chr10 72874688 72874755 -72714533 + AluJ/FLAM SINE Alu 1 67 -245 30 0 0 0 chr10 72874759 72874789 -72714499 + AT_rich Low_complexity Low_complexity 1 30 0 322 302 83 0 chr10 72875135 72875231 -72714057 + L2 LINE L2 3128 3231 -41 233 56 0 28 chr10 72875740 72875776 -72713512 + (GAAA)n Simple_repeat Simple_repeat 4 38 0 803 172 0 0 chr10 72876255 72876371 -72712917 + FLAM_C SINE Alu 3 118 -15 22 35 0 0 chr10 72876371 72876400 -72712888 + AT_rich Low_complexity Low_complexity 1 29 0 841 181 0 0 chr10 72876455 72876588 -72712700 - FLAM_C SINE Alu 0 133 1 588 211 84 42 chr10 72876590 72876648 -72712640 - MER5B DNA MER1_type -5 173 119 2280 108 3 3 chr10 72876648 72876954 -72712334 + AluSq SINE Alu 1 306 -7 588 211 84 42 chr10 72876954 72877061 -72712227 - MER5B DNA MER1_type -59 119 1 40 73 0 0 chr10 72877264 72877346 -72711942 + AT_rich Low_complexity Low_complexity 1 82 0 2073 127 0 3 chr10 72878205 72878505 -72710783 - AluSx SINE Alu -13 299 1 2371 67 0 0 chr10 72878666 72878974 -72710314 - AluY SINE Alu 0 308 1 501 216 0 10 chr10 72879209 72879306 -72709982 + MER2 DNA MER2_type 2 97 -248 791 273 106 9 chr10 72879340 72879662 -72709626 - L1ME4a LINE L1 -253 5868 5516 1907 139 31 0 chr10 72879721 72880015 -72709273 - AluSx SINE Alu -9 303 1 417 20 0 0 chr10 72880021 72880071 -72709217 + (TG)n Simple_repeat Simple_repeat 2 51 0 2163 121 7 7 chr10 72880300 72880605 -72708683 + AluSx SINE Alu 1 305 -7 2289 107 3 0 chr10 72880703 72881011 -72708277 + AluSc SINE Alu 1 309 0 2204 127 0 0 chr10 72881029 72881328 -72707960 + AluSx SINE Alu 1 299 -13 2655 130 61 26 chr10 72881484 72881541 -72707747 - L1MA8 LINE L1 -2 6289 6235 183 80 0 0 chr10 72881541 72881566 -72707722 + (TA)n Simple_repeat Simple_repeat 1 25 0 2655 130 61 26 chr10 72881566 72881999 -72707289 - L1MA8 LINE L1 -56 6235 5782 2232 130 179 22 chr10 72881999 72882342 -72706946 - Tigger5 DNA MER2_type -2 2321 1901 2051 115 10 35 chr10 72882342 72882480 -72706808 + AluSg SINE Alu 1 141 -169 2360 94 0 0 chr10 72882480 72882778 -72706510 + AluY SINE Alu 1 298 -13 2051 115 10 35 chr10 72882778 72882951 -72706337 + AluSg SINE Alu 141 304 -6 2232 130 179 22 chr10 72882951 72883021 -72706267 - Tigger5 DNA MER2_type -422 1901 1843 1389 191 5 0 chr10 72883026 72883246 -72706042 - Tigger5 DNA MER2_type -2102 221 1 2759 114 36 83 chr10 72883246 72883773 -72705515 - L1MA8 LINE L1 -515 5785 5234 2467 73 0 6 chr10 72883773 72884086 -72705202 - AluY SINE Alu 0 311 1 1815 148 3 36 chr10 72884086 72884390 -72704898 - AluJb SINE Alu -18 294 1 2759 114 36 83 chr10 72884390 72884552 -72704736 - L1MA8 LINE L1 -1064 5236 5113 2151 121 0 0 chr10 72885132 72885452 -72703836 - AluSx SINE Alu 0 320 1 483 292 83 18 chr10 72885589 72885757 -72703531 + L1M4 LINE L1 204 382 -6160 1331 121 0 0 chr10 72885768 72885950 -72703338 - AluSg/x SINE Alu -7 303 122 2254 116 0 0 chr10 72885963 72886265 -72703023 - AluSx SINE Alu -10 302 1 5581 211 29 37 chr10 72886267 72886478 -72702810 + L1M4 LINE L1 391 602 -6044 2103 129 30 0 chr10 72886478 72886780 -72702508 + AluSx SINE Alu 1 311 -1 5581 211 29 37 chr10 72886780 72887910 -72701378 + L1M4 LINE L1 602 1708 -4938 1927 143 3 3 chr10 72887910 72888203 -72701085 + AluSx SINE Alu 5 297 -15 5581 211 29 37 chr10 72888203 72888554 -72700734 + L1M4 LINE L1 1708 2060 -4586 848 125 0 35 chr10 72888548 72888692 -72700596 + L1MB2 LINE L1 5352 5490 -693 * 1911 129 13 23 chr10 72888692 72889001 -72700287 + AluSx SINE Alu 2 307 -5 570 154 18 0 chr10 72889003 72889113 -72700175 + L1MB2 LINE L1 6059 6170 -1 2215 89 0 0 chr10 72889121 72889422 -72699866 + AluY SINE Alu 1 301 0 1307 185 98 45 chr10 72889433 72889719 -72699569 + AluJo SINE Alu 1 301 -1 494 253 48 48 chr10 72889730 72889959 -72699329 + L1M4 LINE L1 2265 2493 -4153 857 243 0 0 chr10 72889959 72890136 -72699152 + FRAM SINE Alu 1 176 0 960 92 18 12 chr10 72890148 72890311 -72698977 + (GAAA)n Simple_repeat Simple_repeat 3 166 0 1414 202 13 65 chr10 72890383 72890577 -72698711 + L1M4 LINE L1 2564 2766 -3878 1921 120 0 114 chr10 72890577 72890911 -72698377 + AluSx SINE Alu 2 297 -5 1414 202 13 65 chr10 72890911 72890969 -72698319 + L1M4 LINE L1 2766 2825 -3819 2311 68 7 0 chr10 72890969 72891294 -72697994 - AluSp SINE Alu 0 330 4 1414 202 13 65 chr10 72891294 72891599 -72697689 + L1M4 LINE L1 2825 3033 -3611 1267 155 14 0 chr10 72891599 72891806 -72697482 + MER2 DNA MER2_type 1 210 -135 838 154 0 42 chr10 72891850 72891993 -72697295 - FLAM_C SINE Alu -5 138 2 2237 107 0 13 chr10 72891997 72892297 -72696991 - AluSx SINE Alu -16 296 1 213 196 0 0 chr10 72892322 72892368 -72696920 + T-rich Low_complexity Low_complexity 1 46 0 1402 224 15 3 chr10 72892430 72892769 -72696519 + L1M4 LINE L1 3028 3370 -3274 * 2658 145 203 131 chr10 72892762 72893121 -72696167 + L1MC3 LINE L1 6732 7064 -721 343 207 46 46 chr10 72893121 72893208 -72696080 + MLT1F1 LTR MaLR 39 125 -442 2658 145 203 131 chr10 72893208 72893554 -72695734 + L1MC3 LINE L1 7064 7384 -401 1947 147 0 10 chr10 72893554 72893854 -72695434 + AluJo SINE Alu 1 297 -15 2658 145 203 131 chr10 72893854 72893920 -72695368 + L1MC3 LINE L1 7384 7444 -341 1526 165 79 38 chr10 72893920 72894211 -72695077 - AluJo SINE Alu -4 308 6 2658 145 203 131 chr10 72894211 72894329 -72694959 + L1MC3 LINE L1 7444 7779 -6 1347 171 43 39 chr10 72894333 72894455 -72694833 + MLT1F1 LTR MaLR 307 427 -140 1989 139 7 0 chr10 72894455 72894750 -72694538 + AluSx SINE Alu 1 297 -15 1347 171 43 39 chr10 72894750 72894885 -72694403 + MLT1F1 LTR MaLR 427 565 -2 2226 82 0 0 chr10 72895381 72895650 -72693638 - AluSc SINE Alu -40 269 1 1983 129 14 4 chr10 72895780 72896091 -72693197 - AluSx SINE Alu 0 314 1 2158 130 0 0 chr10 72896139 72896446 -72692842 + AluSg SINE Alu 1 307 -3 1992 146 0 3 chr10 72896457 72896758 -72692530 + AluSx SINE Alu 1 300 -12 257 386 71 20 chr10 72896819 72897073 -72692215 + L2 LINE L2 2826 3092 -180 1636 144 115 11 chr10 72897232 72897510 -72691778 - AluSx SINE Alu 0 312 6 258 226 43 118 chr10 72897916 72897942 -72691346 - MIR SINE MIR -65 143 117 2146 136 0 0 chr10 72897942 72898251 -72691037 + AluSc SINE Alu 1 309 0 258 226 43 118 chr10 72898251 72898317 -72690971 - MIR SINE MIR -91 117 58 2295 100 13 0 chr10 72898573 72898872 -72690416 + AluSg SINE Alu 1 303 -7 2080 123 0 3 chr10 72900047 72900354 -72688934 - AluSx SINE Alu 0 306 1 207 0 0 0 chr10 72900482 72900505 -72688783 + (CAAG)n Simple_repeat Simple_repeat 4 26 0 495 286 84 7 chr10 72901023 72901177 -72688111 + MIR SINE MIR 10 175 -87 1471 76 47 24 chr10 72901738 72901885 -72687403 - AluY SINE Alu -29 282 127 432 0 0 0 chr10 72901885 72901933 -72687355 + (TG)n Simple_repeat Simple_repeat 2 49 0 1471 76 47 24 chr10 72901933 72901996 -72687292 - AluY SINE Alu -184 127 67 1476 126 53 70 chr10 72902032 72902334 -72686954 - AluJb SINE Alu -15 297 1 914 216 43 35 chr10 72905584 72905867 -72683421 - L1MB7 LINE L1 -9 6175 5854 225 94 0 0 chr10 72906394 72906426 -72682862 + (T)n Simple_repeat Simple_repeat 1 32 0 22 0 0 0 chr10 72906600 72906622 -72682666 + AT_rich Low_complexity Low_complexity 1 22 0 260 220 202 18 chr10 72906916 72907025 -72682263 - MIR SINE MIR -86 176 48 219 88 0 0 chr10 72908921 72908955 -72680333 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1253 81 6 0 chr10 72910863 72911023 -72678265 - AluY SINE Alu -20 291 131 2174 94 27 10 chr10 72911205 72911503 -72677785 - AluSg SINE Alu -7 303 1 859 160 13 13 chr10 72911985 72912141 -72677147 - AluSg/x SINE Alu -19 290 135 21 0 0 0 chr10 72913422 72913443 -72675845 + AT_rich Low_complexity Low_complexity 1 21 0 225 0 0 0 chr10 72914984 72915009 -72674279 + (A)n Simple_repeat Simple_repeat 1 25 0 1002 110 110 0 chr10 72915729 72915874 -72673414 + AluSp SINE Alu 137 297 -16 694 191 32 8 chr10 72917484 72917610 -72671678 + FLAM_A SINE Alu 1 129 -4 872 47 19 0 chr10 72917818 72917925 -72671363 - L1MA1 LINE L1 0 6302 6194 1277 143 81 39 chr10 72918066 72918324 -72670964 + AluJo SINE Alu 37 305 -7 2382 92 3 3 chr10 72918454 72918759 -72670529 - AluSx SINE Alu -7 305 1 21 0 0 0 chr10 72919359 72919380 -72669908 + AT_rich Low_complexity Low_complexity 1 21 0 1753 156 3 62 chr10 72919390 72919711 -72669577 + AluJo SINE Alu 1 302 -10 199 208 257 40 chr10 72919713 72919814 -72669474 - MIR3 SINE MIR -22 186 64 501 209 39 39 chr10 72919943 72920072 -72669216 - MIR3 SINE MIR -27 181 53 460 294 16 75 chr10 72920099 72920351 -72668937 + HAL1 LINE L1 582 818 -1689 356 297 28 14 chr10 72920553 72920698 -72668590 + HAL1 LINE L1 1684 1830 -677 2428 86 0 3 chr10 72920900 72921202 -72668086 + AluSc SINE Alu 1 301 -8 2342 102 0 19 chr10 72921212 72921525 -72667763 + AluSg SINE Alu 1 307 -3 2284 101 10 0 chr10 72921637 72921943 -72667345 + AluSp SINE Alu 1 309 -4 377 264 24 8 chr10 72922212 72922337 -72666951 - L1MC5 LINE L1 -514 7447 7321 2125 110 0 3 chr10 72922337 72922619 -72666669 + AluSx SINE Alu 1 281 -31 191 30 0 61 chr10 72922623 72922656 -72666632 + (TAAAA)n Simple_repeat Simple_repeat 4 34 0 24 0 0 0 chr10 72922784 72922808 -72666480 + AT_rich Low_complexity Low_complexity 1 24 0 2037 62 0 0 chr10 72922810 72923051 -72666237 + AluY SINE Alu 1 241 -70 2139 107 7 0 chr10 72923156 72923437 -72665851 + AluSx SINE Alu 22 304 -8 781 215 0 28 chr10 72923475 72923619 -72665669 - FLAM_C SINE Alu -1 142 3 742 262 97 78 chr10 72923619 72924009 -72665279 + HAL1 LINE L1 1637 2039 -468 2155 107 32 0 chr10 72924009 72924290 -72664998 + AluSg SINE Alu 1 290 -20 742 262 97 78 chr10 72924290 72924396 -72664892 + HAL1 LINE L1 2039 2142 -365 2248 104 7 0 chr10 72924411 72924709 -72664579 + AluSx SINE Alu 1 300 -12 1056 134 6 0 chr10 72924711 72924868 -72664420 + AluSg/x SINE Alu 136 293 -19 1784 169 3 0 chr10 72924888 72925178 -72664110 + AluJo SINE Alu 11 301 -11 24 0 0 0 chr10 72925182 72925206 -72664082 + AT_rich Low_complexity Low_complexity 1 24 0 502 234 22 49 chr10 72925272 72925456 -72663832 + HAL1 LINE L1 2245 2423 -84 22 0 0 0 chr10 72925490 72925512 -72663776 + AT_rich Low_complexity Low_complexity 1 22 0 1401 156 62 27 chr10 72925566 72925822 -72663466 - AluJb SINE Alu -45 267 3 191 253 195 0 chr10 72925847 72925934 -72663354 + L3 LINE CR1 1402 1505 -72 474 253 78 42 chr10 72925962 72926128 -72663160 - MIR SINE MIR -44 218 47 2158 133 0 0 chr10 72926206 72926507 -72662781 - AluSx SINE Alu -11 301 1 2687 48 0 0 chr10 72926993 72927302 -72661986 + AluY SINE Alu 1 309 -2 364 235 291 25 chr10 72927335 72927531 -72661757 - MIR SINE MIR -4 258 11 2107 125 7 7 chr10 72927582 72927887 -72661401 + AluSx SINE Alu 1 305 -7 1977 133 7 3 chr10 72927922 72928208 -72661080 - AluSx SINE Alu -24 288 2 2035 115 13 26 chr10 72928238 72928551 -72660737 + AluSx SINE Alu 1 309 -3 2183 119 0 10 chr10 72928590 72928892 -72660396 - AluSx SINE Alu -13 299 1 23 33 0 0 chr10 72928900 72928930 -72660358 + AT_rich Low_complexity Low_complexity 1 30 0 1943 152 0 10 chr10 72929269 72929586 -72659702 + AluSx SINE Alu 4 312 0 2223 99 0 0 chr10 72929989 72930272 -72659016 + AluSx SINE Alu 1 283 -29 1462 119 5 0 chr10 72930457 72930650 -72658638 + AluSx SINE Alu 1 194 -118 222 118 0 0 chr10 72930655 72930689 -72658599 + (TA)n Simple_repeat Simple_repeat 1 34 0 238 208 10 83 chr10 72930710 72930806 -72658482 + L1MC4 LINE L1 6614 6702 -1340 203 80 8 96 chr10 72930829 72930954 -72658334 + (TA)n Simple_repeat Simple_repeat 1 114 0 22 0 0 0 chr10 72931004 72931026 -72658262 + AT_rich Low_complexity Low_complexity 1 22 0 968 112 15 0 chr10 72931029 72931163 -72658125 + AluSg/x SINE Alu 158 293 -17 1479 93 10 0 chr10 72931290 72931484 -72657804 - AluSx SINE Alu -116 196 1 1050 176 112 97 chr10 72931513 72931791 -72657497 + AluJo SINE Alu 1 282 -30 25 0 0 0 chr10 72931791 72931816 -72657472 + AT_rich Low_complexity Low_complexity 1 25 0 2258 75 0 17 chr10 72931822 72932114 -72657174 + AluY SINE Alu 1 287 -24 612 125 0 0 chr10 72932178 72932289 -72656999 + AluSg/x SINE Alu 200 310 0 2094 95 31 17 chr10 72932361 72932655 -72656633 + AluSq SINE Alu 1 298 -15 422 232 12 0 chr10 72932775 72932857 -72656431 + L2 LINE L2 3231 3313 0 231 148 204 0 chr10 72932860 72932914 -72656374 + MIR SINE MIR 186 250 -12 1705 182 0 19 chr10 72933403 72933716 -72655572 + AluJo SINE Alu 1 307 -5 1739 174 37 0 chr10 72933870 72934169 -72655119 + AluJo SINE Alu 1 310 -2 1855 119 56 18 chr10 72934555 72934840 -72654448 - AluSg SINE Alu -14 296 1 233 292 31 21 chr10 72935718 72935814 -72653474 + L1ME4a LINE L1 5932 6028 -93 660 145 30 46 chr10 72936076 72936207 -72653081 - FLAM_A SINE Alu -4 138 10 21 36 0 0 chr10 72936437 72936465 -72652823 + AT_rich Low_complexity Low_complexity 1 28 0 3283 184 26 2 chr10 72936609 72937190 -72652098 + MER6A DNA MER2_type 11 605 0 2024 137 0 13 chr10 72937415 72937721 -72651567 + AluSx SINE Alu 11 312 0 2050 124 4 0 chr10 72937821 72938096 -72651192 + AluSx SINE Alu 1 276 -36 399 83 89 6 chr10 72938100 72938257 -72651031 + (TA)n Simple_repeat Simple_repeat 2 171 0 1995 99 0 0 chr10 72938260 72938513 -72650775 + AluSg SINE Alu 13 265 -45 984 190 0 17 chr10 72938808 72938987 -72650301 - FRAM SINE Alu -8 168 1 499 212 8 8 chr10 72938987 72939119 -72650169 + CT-rich Low_complexity Low_complexity 1 132 0 868 169 0 0 chr10 72939124 72939260 -72650028 - FLAM_C SINE Alu -7 136 1 2336 80 0 13 chr10 72939328 72939628 -72649660 - AluSg SINE Alu -14 296 1 2302 100 3 0 chr10 72939741 72940041 -72649247 + AluSp SINE Alu 4 304 -9 1621 256 25 18 chr10 72940041 72940479 -72648809 + L1MDa LINE L1 120 560 -5980 1566 189 59 104 chr10 72940482 72940568 -72648720 + MSTC LTR MaLR 1 89 -339 2154 137 0 0 chr10 72940568 72940875 -72648413 + AluJb SINE Alu 6 312 0 1566 189 59 104 chr10 72940875 72941000 -72648288 + MSTC LTR MaLR 89 218 -210 878 158 0 0 chr10 72941000 72941127 -72648161 + AluJo SINE Alu 1 127 -175 1566 189 59 104 chr10 72941127 72941358 -72647930 + MSTC LTR MaLR 218 424 -4 2012 121 3 7 chr10 72941362 72941659 -72647629 + AluSq SINE Alu 1 296 -17 228 67 0 0 chr10 72941798 72941828 -72647460 + (T)n Simple_repeat Simple_repeat 1 30 0 890 185 20 46 chr10 72941845 72942040 -72647248 + AluJo SINE Alu 123 312 0 530 187 93 22 chr10 72942040 72942179 -72647109 + L1MDa LINE L1 1297 1445 -5095 1311 82 16 33 chr10 72942192 72942211 -72647077 + AluSc SINE Alu 114 132 -177 2429 83 0 0 chr10 72942211 72942511 -72646777 + AluY SINE Alu 1 300 -11 1935 123 34 7 chr10 72942511 72942803 -72646485 + AluSg SINE Alu 1 301 -9 1311 82 16 33 chr10 72942803 72942964 -72646324 + AluSc SINE Alu 130 292 -17 2728 193 93 63 chr10 72942964 72943369 -72645919 + L1MDa LINE L1 1513 1904 -4636 1376 180 46 49 chr10 72943369 72943487 -72645801 + AluJo SINE Alu 1 118 -194 1772 171 31 10 chr10 72943487 72943780 -72645508 + AluJo SINE Alu 1 299 -13 1376 180 46 49 chr10 72943780 72943966 -72645322 + AluJo SINE Alu 118 304 -8 1740 156 3 60 chr10 72943968 72944283 -72645005 + AluJb SINE Alu 1 297 -15 2728 193 93 63 chr10 72944283 72944845 -72644443 + L1MDa LINE L1 1904 2447 -4093 1637 185 10 27 chr10 72944845 72945143 -72644145 + AluJo SINE Alu 1 293 -19 2728 193 93 63 chr10 72945143 72945192 -72644096 + L1MDa LINE L1 2447 2493 -4047 1726 150 35 38 chr10 72945192 72945505 -72643783 + AluJo SINE Alu 1 312 0 897 142 0 15 chr10 72945515 72945649 -72643639 + FLAM_C SINE Alu 2 133 0 2728 193 93 63 chr10 72945649 72946010 -72643278 + L1MDa LINE L1 2501 3011 -3529 312 305 55 55 chr10 72946150 72946422 -72642866 - L1ME4a LINE L1 -1 6120 5849 772 192 8 23 chr10 72946473 72946603 -72642685 + FLAM_C SINE Alu 2 129 -4 1797 78 4 0 chr10 72946608 72946840 -72642448 + L1PA14 LINE L1 5929 6161 0 2476 70 0 7 chr10 72946853 72947151 -72642137 + AluY SINE Alu 1 296 -15 2070 119 0 41 chr10 72947177 72947497 -72641791 + AluSx SINE Alu 2 308 -4 2261 96 0 10 chr10 72947504 72947797 -72641491 + AluSq SINE Alu 1 290 -23 441 0 0 0 chr10 72947803 72947852 -72641436 + (TA)n Simple_repeat Simple_repeat 1 49 0 21 71 0 0 chr10 72948047 72948089 -72641199 + AT_rich Low_complexity Low_complexity 1 42 0 211 200 0 0 chr10 72948873 72948908 -72640380 + (TG)n Simple_repeat Simple_repeat 2 36 0 21 0 0 0 chr10 72949858 72949879 -72639409 + AT_rich Low_complexity Low_complexity 1 21 0 201 186 23 0 chr10 72950726 72950769 -72638519 + GA-rich Low_complexity Low_complexity 3 46 0 279 54 0 0 chr10 72950918 72950955 -72638333 + (TG)n Simple_repeat Simple_repeat 2 38 0 483 207 11 0 chr10 72950955 72951042 -72638246 - FLAM_A SINE Alu -21 121 34 2353 75 7 3 chr10 72951173 72951468 -72637820 - AluY SINE Alu -15 296 1 893 131 15 0 chr10 72951469 72951599 -72637689 - AluJo/FLAM SINE Alu -170 132 1 215 190 35 0 chr10 72951615 72951627 -72637661 + A-rich Low_complexity Low_complexity 1 11 -49 696 100 108 85 chr10 72951627 72951757 -72637531 + FLAM_C SINE Alu 1 133 0 215 190 35 0 chr10 72951757 72951802 -72637486 + A-rich Low_complexity Low_complexity 11 60 0 2321 109 0 0 chr10 72951940 72952244 -72637044 + AluSx SINE Alu 1 304 -8 1985 138 0 10 chr10 72952923 72953213 -72636075 + AluSx SINE Alu 1 287 -25 1264 120 0 0 chr10 72953406 72953589 -72635699 - AluY SINE Alu -9 302 120 2560 74 0 0 chr10 72953901 72954212 -72635076 + AluY SINE Alu 1 311 0 311 208 133 33 chr10 72954255 72954375 -72634913 + L1ME3A LINE L1 6039 6170 0 302 214 180 0 chr10 72954419 72954508 -72634780 + MER112 DNA MER1_type 152 256 -4 1974 157 0 0 chr10 72954511 72954797 -72634491 + AluSx SINE Alu 1 286 -26 2141 124 0 3 chr10 72954805 72955103 -72634185 + AluSx SINE Alu 1 297 -15 2460 68 0 7 chr10 72956450 72956746 -72632542 + AluSg SINE Alu 1 294 -16 770 82 0 0 chr10 72957074 72957172 -72632116 - L1PA8 LINE L1 -2 6170 6073 2294 89 3 0 chr10 72957824 72958115 -72631173 - AluSg SINE Alu -18 292 1 2345 95 0 0 chr10 72958543 72958838 -72630450 + AluSq SINE Alu 1 295 -18 271 262 76 75 chr10 72959118 72959191 -72630097 + MIR SINE MIR 38 109 -153 2296 108 0 0 chr10 72959191 72959498 -72629790 + AluSg SINE Alu 1 307 -3 271 262 76 75 chr10 72959498 72959622 -72629666 + MIR SINE MIR 109 235 -27 2078 113 14 3 chr10 72959652 72959935 -72629353 + AluSg SINE Alu 1 286 -24 1748 166 6 10 chr10 72960023 72960336 -72628952 + AluJb SINE Alu 1 312 0 1593 175 10 26 chr10 72960357 72960665 -72628623 - AluJb SINE Alu -7 305 3 2140 115 7 3 chr10 72960779 72961075 -72628213 + AluSg SINE Alu 1 297 -13 807 181 19 25 chr10 72961113 72961273 -72628015 + AluSg/x SINE Alu 134 292 -20 377 282 149 28 chr10 72961273 72961528 -72627760 + L1MC4a LINE L1 5874 6159 -1649 406 172 101 10 chr10 72961768 72961867 -72627421 - L1ME4a LINE L1 -4 6117 6010 861 166 13 25 chr10 72961943 72962100 -72627188 + MER33 DNA MER1_type 1 155 -169 785 183 8 8 chr10 72962102 72962228 -72627060 - FLAM_A SINE Alu -7 126 1 1039 162 0 54 chr10 72962237 72962403 -72626885 - AluJo SINE Alu -14 298 141 2316 101 0 3 chr10 72962403 72962701 -72626587 - AluSx SINE Alu -12 300 4 1039 162 0 54 chr10 72962701 72962719 -72626569 - AluJo SINE Alu -171 141 124 301 172 103 0 chr10 72962719 72962835 -72626453 + MER33 DNA MER1_type 165 292 -32 1899 151 10 26 chr10 72962835 72963146 -72626142 + AluJb SINE Alu 1 306 -6 2043 108 0 21 chr10 72963146 72963470 -72625818 + AluSx SINE Alu 1 318 0 2137 97 10 27 chr10 72963639 72963939 -72625349 - AluSq SINE Alu -18 295 1 2222 85 16 39 chr10 72964250 72964556 -72624732 + AluSc SINE Alu 1 299 -10 23 33 0 0 chr10 72964885 72964915 -72624373 + AT_rich Low_complexity Low_complexity 1 30 0 2190 112 0 3 chr10 72965055 72965351 -72623937 + AluSx SINE Alu 1 295 -17 358 255 0 61 chr10 72966204 72966223 -72623065 - L1ME LINE L1 -507 5614 5595 2102 96 47 17 chr10 72966223 72966524 -72622764 - AluY SINE Alu -1 310 1 358 255 0 61 chr10 72966524 72966602 -72622686 - L1ME LINE L1 -526 5595 5523 669 91 0 0 chr10 72967508 72967596 -72621692 + AluSg/x SINE Alu 214 301 -9 2137 100 31 3 chr10 72968236 72968527 -72620761 - AluSx SINE Alu -13 299 1 1458 149 105 7 chr10 72969354 72969630 -72619658 - MER7A DNA MER2_type 0 346 46 1351 161 3 143 chr10 72969689 72970031 -72619257 + AluSx SINE Alu 5 298 -14 2140 132 0 0 chr10 72970084 72970388 -72618900 + AluSg SINE Alu 1 304 -6 2187 104 0 0 chr10 72970607 72970896 -72618392 + AluSx SINE Alu 1 289 -23 23 0 0 0 chr10 72970896 72970919 -72618369 + AT_rich Low_complexity Low_complexity 1 23 0 2017 127 3 41 chr10 72971267 72971582 -72617706 - AluSx SINE Alu -9 303 1 280 265 191 7 chr10 72971604 72971740 -72617548 + MIR SINE MIR 48 208 -54 267 81 0 0 chr10 72971992 72972029 -72617259 + Alu SINE Alu 1 37 -265 1900 109 11 7 chr10 72972029 72972312 -72616976 - AluSp SINE Alu -23 290 7 236 153 169 0 chr10 72972525 72972643 -72616645 + AluSc SINE Alu 2 139 -160 1077 137 0 12 chr10 72972752 72972920 -72616368 + AluSg/x SINE Alu 143 308 -2 2323 103 0 6 chr10 72972969 72973280 -72616008 + AluY SINE Alu 1 309 -2 2533 51 0 3 chr10 72973305 72973601 -72615687 + AluY SINE Alu 1 295 -16 22 35 0 0 chr10 72974665 72974694 -72614594 + AT_rich Low_complexity Low_complexity 1 29 0 794 129 0 71 chr10 72974697 72974837 -72614451 - FLAM_C SINE Alu -3 130 1 2262 121 0 7 chr10 72975414 72975720 -72613568 - AluSx SINE Alu -8 304 1 2100 101 4 7 chr10 72975830 72976107 -72613181 - AluSx SINE Alu -17 295 20 862 174 0 7 chr10 72976368 72976512 -72612776 - AluJb SINE Alu -14 298 156 236 135 0 27 chr10 72976515 72976552 -72612736 - AluSx SINE Alu -264 36 1 24 0 0 0 chr10 72976691 72976715 -72612573 + AT_rich Low_complexity Low_complexity 1 24 0 2527 81 0 0 chr10 72977607 72977916 -72611372 + AluSc SINE Alu 1 309 0 2313 73 3 23 chr10 72980530 72980832 -72608456 - AluY SINE Alu -15 296 1 1963 129 36 0 chr10 72980860 72981140 -72608148 + AluSx SINE Alu 1 290 -22 872 119 0 22 chr10 72981166 72981300 -72607988 + FLAM_C SINE Alu 3 133 0 2060 96 0 4 chr10 72981479 72981740 -72607548 + AluSq SINE Alu 1 260 -53 2412 95 0 0 chr10 72981968 72982273 -72607015 + AluY SINE Alu 1 305 -6 1024 161 17 11 chr10 72982734 72982914 -72606374 - AluSg/x SINE Alu -11 301 121 1962 130 6 43 chr10 72982916 72983240 -72606048 - AluSx SINE Alu 0 312 1 2362 96 0 3 chr10 72983708 72984010 -72605278 + AluSc SINE Alu 1 301 -8 53 53 0 30 chr10 72984012 72984085 -72605203 + AT_rich Low_complexity Low_complexity 1 70 -58 673 198 0 0 chr10 72984085 72984201 -72605087 + FLAM_C SINE Alu 1 116 -17 53 53 0 30 chr10 72984201 72984259 -72605029 + AT_rich Low_complexity Low_complexity 70 128 0 716 291 56 20 chr10 72984429 72984680 -72604608 - MIR SINE MIR 0 262 3 448 351 20 36 chr10 72984813 72985061 -72604227 - L2 LINE L2 -252 3061 2818 606 111 0 0 chr10 72985066 72985147 -72604141 + AluSc SINE Alu 5 85 -224 2295 116 0 3 chr10 72985147 72985457 -72603831 + AluSg SINE Alu 1 309 -1 1717 102 4 0 chr10 72985459 72985684 -72603604 + AluSg/x SINE Alu 77 302 -8 311 256 15 66 chr10 72985692 72985760 -72603528 - L2 LINE L2 -495 2819 2760 2234 119 0 0 chr10 72985760 72986062 -72603226 + AluSx SINE Alu 1 302 -10 311 256 15 66 chr10 72986062 72986130 -72603158 - L2 LINE L2 -554 2760 2690 2084 128 0 0 chr10 72986175 72986472 -72602816 + AluSp SINE Alu 14 310 -3 1630 184 9 22 chr10 72986564 72986880 -72602408 + AluJb SINE Alu 1 312 0 285 216 124 0 chr10 72986882 72986979 -72602309 + L1M4 LINE L1 3373 3481 -2665 1686 183 25 14 chr10 72986983 72987268 -72602020 + AluJb SINE Alu 1 288 -24 2242 105 20 0 chr10 72987281 72987575 -72601713 + AluSp SINE Alu 1 300 -13 2557 67 0 0 chr10 72987672 72987971 -72601317 + AluY SINE Alu 1 299 -12 1328 233 89 33 chr10 72987972 72988169 -72601119 + L1M4 LINE L1 3502 3687 -2459 1726 192 0 13 chr10 72988169 72988477 -72600811 + AluJo SINE Alu 1 304 -8 1328 233 89 33 chr10 72988477 72988760 -72600528 + L1M4 LINE L1 3687 4009 -2137 550 197 169 67 chr10 72988775 72988819 -72600469 + MLT1G1 LTR MaLR 10 48 -547 2096 124 10 0 chr10 72988819 72989109 -72600179 - AluSx SINE Alu -15 297 5 550 197 169 67 chr10 72989109 72989242 -72600046 + MLT1G1 LTR MaLR 48 205 -390 2105 122 7 7 chr10 72989343 72989638 -72599650 - AluSx SINE Alu -16 296 2 349 290 75 81 chr10 72989796 72990032 -72599256 - L2 LINE L2 -1611 1703 1468 1870 97 57 11 chr10 72990032 72990311 -72598977 - AluSg SINE Alu -18 292 1 349 290 75 81 chr10 72990311 72990381 -72598907 - L2 LINE L2 -1846 1468 1399 511 32 0 0 chr10 72990520 72990582 -72598706 + AluYa5 SINE Alu 151 212 -99 927 183 0 24 chr10 72992127 72992296 -72596992 - FRAM SINE Alu -1 165 1 2329 102 0 7 chr10 72992999 72993302 -72595986 + AluSp SINE Alu 1 301 -12 1154 38 0 8 chr10 72993367 72993500 -72595788 - AluY SINE Alu -179 132 1 2383 88 3 0 chr10 72993688 72993995 -72595293 - AluSx SINE Alu -4 308 1 681 236 11 17 chr10 72994691 72994869 -72594419 - MIR SINE MIR -51 211 35 33 66 0 0 chr10 72994888 72994949 -72594339 + AT_rich Low_complexity Low_complexity 1 61 0 1245 128 0 0 chr10 72995041 72995213 -72594075 + AluSg/x SINE Alu 129 300 -12 256 172 103 0 chr10 72995226 72995284 -72594004 - L1MC5 LINE L1 -53 7908 7845 2075 120 10 0 chr10 72995355 72995646 -72593642 + AluSg SINE Alu 1 294 -16 560 155 240 0 chr10 72995727 72995856 -72593432 - AluJb SINE Alu -16 296 137 2447 70 0 3 chr10 72995885 72996183 -72593105 + AluY SINE Alu 1 297 -14 27 81 0 0 chr10 72996422 72996484 -72592804 + AT_rich Low_complexity Low_complexity 1 62 0 1566 126 0 31 chr10 72996519 72996742 -72592546 + AluSg/x SINE Alu 84 299 -13 251 263 11 32 chr10 72996774 72996869 -72592419 - L1ME4a LINE L1 -68 6053 5961 2539 64 3 0 chr10 72997447 72997745 -72591543 + AluY SINE Alu 1 299 -12 579 196 0 53 chr10 72997760 72997893 -72591395 - FLAM_A SINE Alu -7 126 1 2337 71 17 0 chr10 72997905 72998199 -72591089 - AluSp SINE Alu -1 312 14 2008 130 0 7 chr10 72998227 72998536 -72590752 - AluSx SINE Alu 0 307 1 349 267 0 0 chr10 72998539 72998614 -72590674 - L1ME4a LINE L1 -2211 5597 5523 1136 85 12 30 chr10 72999082 72999246 -72590042 - AluY SINE Alu -14 297 137 2590 53 0 0 chr10 72999304 72999604 -72589684 - AluY SINE Alu -11 300 1 2039 118 20 10 chr10 72999624 72999920 -72589368 - AluSx SINE Alu -13 299 1 571 215 153 11 chr10 72999925 73000102 -72589186 - MIR SINE MIR -14 248 47 692 135 98 138 chr10 73000218 73000396 -72588892 - Charlie1b DNA MER1_type -2238 523 360 2034 124 11 3 chr10 73000396 73000678 -72588610 - AluSx SINE Alu -28 284 1 692 135 98 138 chr10 73000678 73000796 -72588492 - Charlie1b DNA MER1_type -2401 360 239 473 221 0 19 chr10 73000800 73000904 -72588384 - FRAM SINE Alu -3 173 72 2402 98 3 0 chr10 73000914 73001220 -72588068 - AluSp SINE Alu -6 307 1 831 125 8 0 chr10 73001240 73001360 -72587928 - 5S rRNA rRNA 0 121 1 656 253 62 0 chr10 73001369 73001563 -72587725 - Charlie1b DNA MER1_type -267 256 51 953 189 6 0 chr10 73001843 73002002 -72587286 - FRAM SINE Alu -16 160 1 1973 135 35 0 chr10 73002059 73002347 -72586941 + AluSq SINE Alu 1 298 -15 1989 166 0 6 chr10 73002358 73002672 -72586616 + AluSx SINE Alu 1 312 0 303 71 0 0 chr10 73002701 73002743 -72586545 + (TG)n Simple_repeat Simple_repeat 1 42 0 2005 126 0 0 chr10 73002743 73003020 -72586268 - AluSg SINE Alu -33 277 1 2361 136 40 6 chr10 73003020 73003425 -72585863 - L1MB3 LINE L1 -41 6142 5724 2222 114 3 7 chr10 73003893 73004200 -72585088 - AluSx SINE Alu -6 306 1 2176 131 0 6 chr10 73004203 73004517 -72584771 - AluSx SINE Alu 0 312 1 2180 125 0 0 chr10 73004580 73004876 -72584412 - AluSx SINE Alu -16 296 1 203 211 77 0 chr10 73005197 73005249 -72584039 + CT-rich Low_complexity Low_complexity 3 58 0 2326 104 0 0 chr10 73005272 73005569 -72583719 - AluSx SINE Alu -15 297 1 204 40 0 0 chr10 73005669 73005694 -72583594 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 205 372 0 0 chr10 73005799 73005877 -72583411 - L2 LINE L2 -8 3264 3187 1653 129 20 8 chr10 73006195 73006450 -72582838 - Tigger3(Golem) DNA MER2_type -1 3028 2771 521 195 154 0 chr10 73006447 73006570 -72582718 - Tigger3(Golem) DNA MER2_type -2887 142 1 * 335 329 53 0 chr10 73006580 73006732 -72582556 + L1M4 LINE L1 2689 2848 -3298 2260 108 3 3 chr10 73006892 73007188 -72582100 + AluSx SINE Alu 1 296 -16 1725 166 0 41 chr10 73007209 73007525 -72581763 + AluJb SINE Alu 1 304 0 1303 210 54 20 chr10 73007720 73008015 -72581273 + AluJb SINE Alu 1 305 -7 26 0 0 0 chr10 73008120 73008146 -72581142 + AT_rich Low_complexity Low_complexity 1 26 0 823 153 8 0 chr10 73008203 73008327 -72580961 + AluSq/x SINE Alu 1 125 -188 1687 135 12 8 chr10 73008972 73009231 -72580057 - AluSx SINE Alu -7 305 46 1081 164 33 0 chr10 73009537 73009720 -72579568 - MER5A DNA MER1_type 0 189 1 710 127 0 0 chr10 73010093 73010203 -72579085 - AluY SINE Alu -4 307 198 1832 101 40 4 chr10 73010203 73010451 -72578837 - AluSg SINE Alu -53 257 1 921 158 0 7 chr10 73010453 73010599 -72578689 - AluJb SINE Alu -167 145 1 1710 118 122 0 chr10 73010995 73011106 -72578182 + AluSx SINE Alu 1 97 -215 465 19 0 0 chr10 73011106 73011160 -72578128 + (CA)n Simple_repeat Simple_repeat 2 55 0 1710 118 122 0 chr10 73011160 73011319 -72577969 + AluSx SINE Alu 97 304 -8 2576 41 7 3 chr10 73012096 73012391 -72576897 - AluY SINE Alu -15 296 1 932 198 12 0 chr10 73012391 73012553 -72576735 - AluJb SINE Alu -15 297 134 2251 122 3 0 chr10 73012553 73012857 -72576431 - AluSx SINE Alu -7 305 1 2527 136 20 20 chr10 73012939 73013381 -72575907 - L1MA2 LINE L1 0 6304 5863 815 119 0 0 chr10 73013389 73013498 -72575790 - FLAM_C SINE Alu -34 109 1 2018 152 10 0 chr10 73013951 73014248 -72575040 - AluSx SINE Alu -12 300 1 22 99 0 0 chr10 73014256 73014327 -72574961 + AT_rich Low_complexity Low_complexity 1 71 0 1993 136 7 0 chr10 73014589 73014910 -72574378 - AluSq SINE Alu 0 313 1 2239 110 3 3 chr10 73015342 73015650 -72573638 - AluSp SINE Alu -5 308 1 2293 80 7 3 chr10 73015652 73015982 -72573306 - AluSc SINE Alu 0 309 2 971 118 0 0 chr10 73015985 73016112 -72573176 - AluSq/x SINE Alu -180 133 7 2107 120 7 10 chr10 73016125 73016426 -72572862 - AluSq SINE Alu -13 300 1 2097 87 8 0 chr10 73017442 73017707 -72571581 + AluSq SINE Alu 37 303 -10 1283 103 0 0 chr10 73017707 73017872 -72571416 + AluSg/x SINE Alu 134 298 -14 1657 158 48 0 chr10 73017886 73018159 -72571129 + AluJb SINE Alu 9 294 -18 2038 138 3 0 chr10 73018306 73018597 -72570691 - AluSg SINE Alu -18 292 1 1786 167 10 20 chr10 73018731 73019037 -72570251 - AluJo SINE Alu -4 308 6 753 203 0 0 chr10 73019076 73019194 -72570094 - FLAM_C SINE Alu -15 118 1 1993 138 7 0 chr10 73019496 73019786 -72569502 + AluY SINE Alu 1 292 -19 1763 148 42 0 chr10 73019905 73020169 -72569119 - AluSx SINE Alu -37 275 1 2106 101 3 20 chr10 73020176 73020335 -72568953 - AluY SINE Alu -19 292 139 2250 107 3 3 chr10 73020335 73020635 -72568653 - AluSp SINE Alu -13 300 1 2106 101 3 20 chr10 73020635 73020772 -72568516 - AluY SINE Alu -172 139 1 2176 124 3 0 chr10 73020779 73021078 -72568210 - AluSp SINE Alu -13 300 1 2263 97 7 0 chr10 73021141 73021439 -72567849 - AluSx SINE Alu -12 300 1 2357 87 3 0 chr10 73021653 73021953 -72567335 - AluSp SINE Alu -12 301 1 1362 155 0 18 chr10 73022179 73022405 -72566883 + AluSx SINE Alu 1 222 -90 1966 126 3 46 chr10 73022512 73022837 -72566451 - AluSq SINE Alu -2 311 1 2086 154 8 56 chr10 73023197 73023593 -72565695 - L1MB8 LINE L1 0 6178 5802 3085 176 31 15 chr10 73023593 73024175 -72565113 - L1MB5 LINE L1 -6 6168 5576 185 91 0 30 chr10 73024430 73024437 -72564851 + (TA)n Simple_repeat Simple_repeat 2 8 -25 1972 106 14 11 chr10 73024437 73024721 -72564567 + AluY SINE Alu 1 285 -26 185 91 0 30 chr10 73024721 73024746 -72564542 + (TA)n Simple_repeat Simple_repeat 8 33 0 1653 165 20 17 chr10 73024842 73025139 -72564149 + AluJb SINE Alu 1 298 -14 247 264 47 57 chr10 73025140 73025246 -72564042 + MLT1J1 LTR MaLR 1 105 -341 1782 177 7 13 chr10 73025525 73025825 -72563463 - AluJb SINE Alu -14 298 1 2038 126 14 0 chr10 73025908 73026193 -72563095 - AluSx SINE Alu -18 294 6 1222 185 0 5 chr10 73026444 73026655 -72562633 + AluJo SINE Alu 85 294 -18 504 319 100 44 chr10 73026660 73027360 -72561928 - L2 LINE L2 -531 2783 2045 2328 95 0 7 chr10 73028606 73028901 -72560387 + AluSq SINE Alu 1 293 -20 231 114 0 0 chr10 73028945 73028980 -72560308 + (T)n Simple_repeat Simple_repeat 1 35 0 403 167 0 42 chr10 73029002 73029074 -72560214 + AluJ/FLAM SINE Alu 1 69 -243 1348 186 15 34 chr10 73029075 73029339 -72559949 - AluJo SINE Alu -53 259 1 1926 108 67 27 chr10 73030006 73030330 -72558958 + AluSg SINE Alu 1 310 0 743 260 55 28 chr10 73030330 73030584 -72558704 - L1ME3 LINE L1 -3 6159 5899 1101 169 0 0 chr10 73030585 73030763 -72558525 - FRAM SINE Alu -6 170 1 554 103 0 0 chr10 73030864 73030942 -72558346 + Alu SINE Alu 220 297 -12 25 51 0 0 chr10 73031026 73031065 -72558223 + AT_rich Low_complexity Low_complexity 1 39 0 1470 82 0 5 chr10 73031083 73031262 -72558026 - AluY SINE Alu 0 311 132 2212 110 3 0 chr10 73031262 73031562 -72557726 - AluSp SINE Alu -12 301 1 1470 82 0 5 chr10 73031562 73031576 -72557712 - AluY SINE Alu -179 132 119 3752 153 125 49 chr10 73031790 73032485 -72556803 - L1MD1 LINE L1 0 6242 5601 2300 92 3 0 chr10 73032485 73032779 -72556509 - AluY SINE Alu -16 295 1 2263 98 0 3 chr10 73032779 73033073 -72556215 - AluSg SINE Alu -16 294 1 3752 153 125 49 chr10 73033073 73033143 -72556145 - L1MD1 LINE L1 -641 5601 5538 279 0 0 0 chr10 73033143 73033174 -72556114 + (TG)n Simple_repeat Simple_repeat 2 32 0 1562 158 66 26 chr10 73033174 73033447 -72555841 - AluJb SINE Alu -28 284 1 3752 153 125 49 chr10 73033447 73033461 -72555827 - L1MD1 LINE L1 -704 5538 5526 1963 98 76 0 chr10 73033461 73033738 -72555550 - AluSx SINE Alu -14 298 1 3752 153 125 49 chr10 73033738 73033957 -72555331 - L1MD1 LINE L1 -716 5526 5325 2402 76 0 13 chr10 73033957 73034271 -72555017 - AluY SINE Alu -1 310 1 2185 128 0 0 chr10 73034273 73034569 -72554719 - AluSx SINE Alu -16 296 1 3752 153 125 49 chr10 73034569 73034677 -72554611 - L1MD1 LINE L1 -917 5325 5062 1881 167 0 3 chr10 73034678 73034972 -72554316 - AluSx SINE Alu -19 293 1 31 0 0 0 chr10 73035034 73035065 -72554223 + AT_rich Low_complexity Low_complexity 1 31 0 2425 64 0 3 chr10 73035124 73035422 -72553866 + AluY SINE Alu 1 297 -14 2400 87 0 3 chr10 73035431 73035740 -72553548 + AluSg SINE Alu 1 308 -2 1964 161 0 0 chr10 73036299 73036603 -72552685 - AluJo SINE Alu -8 304 1 2753 202 125 29 chr10 73036603 73037617 -72551671 - L1MDa LINE L1 -5198 1342 18 210 37 0 0 chr10 73037629 73037656 -72551632 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2091 116 0 0 chr10 73038712 73038987 -72550301 + AluSg SINE Alu 1 275 -35 2041 121 44 0 chr10 73039055 73039352 -72549936 - AluSx SINE Alu -2 310 1 2231 93 10 0 chr10 73039591 73039881 -72549407 + AluSx SINE Alu 3 295 -17 652 122 11 0 chr10 73039882 73039972 -72549316 - L1MC1 LINE L1 -12 6321 6231 464 132 0 0 chr10 73040021 73040097 -72549191 - AluS SINE Alu -5 306 231 323 239 77 54 chr10 73040241 73040271 -72549017 + MIR SINE MIR 20 48 -214 2235 104 0 0 chr10 73040271 73040568 -72548720 - AluSg SINE Alu -13 297 1 323 239 77 54 chr10 73040568 73040667 -72548621 + MIR SINE MIR 48 152 -110 2459 76 3 0 chr10 73041852 73042155 -72547133 + AluSx SINE Alu 1 304 -8 1131 123 6 0 chr10 73042160 73042331 -72546957 + L1PA8A LINE L1 5933 6104 -27 2371 133 57 23 chr10 73042357 73042396 -72546892 - L1MB2 LINE L1 -7 6164 6128 2130 108 10 0 chr10 73042396 73042693 -72546595 - AluSq SINE Alu -13 300 1 2371 133 57 23 chr10 73042693 73043089 -72546199 - L1MB2 LINE L1 -43 6128 5714 1353 178 51 12 chr10 73043154 73043407 -72545881 - AluJb SINE Alu -12 300 38 204 111 0 0 chr10 73043412 73043448 -72545840 + (T)n Simple_repeat Simple_repeat 1 36 0 1483 168 62 48 chr10 73043572 73043863 -72545425 - AluJo SINE Alu -17 295 1 762 142 0 0 chr10 73044192 73044298 -72544990 - FLAM_C SINE Alu -36 107 2 1765 159 11 4 chr10 73044362 73044639 -72544649 - AluJb SINE Alu -33 279 1 842 224 19 13 chr10 73044669 73044825 -72544463 - AluJb SINE Alu -49 263 107 1935 106 60 0 chr10 73044875 73045170 -72544118 + AluSc SINE Alu 1 311 0 2472 85 3 0 chr10 73045249 73045555 -72543733 + AluSp SINE Alu 1 307 -6 21 0 0 0 chr10 73046549 73046570 -72542718 + AT_rich Low_complexity Low_complexity 1 21 0 24 67 0 0 chr10 73046705 73046750 -72542538 + AT_rich Low_complexity Low_complexity 1 45 0 2431 41 34 17 chr10 73046823 73047118 -72542170 - AluY SINE Alu -11 300 1 183 80 0 0 chr10 73047449 73047474 -72541814 + (T)n Simple_repeat Simple_repeat 1 25 0 2213 99 0 7 chr10 73047526 73047837 -72541451 + AluSq SINE Alu 1 313 0 2823 3 0 0 chr10 73048306 73048607 -72540681 + AluYa5 SINE Alu 1 301 -10 2582 61 0 3 chr10 73048614 73048925 -72540363 + AluSq SINE Alu 1 310 -3 2240 114 0 3 chr10 73049018 73049324 -72539964 - AluSg SINE Alu -5 305 1 597 276 35 48 chr10 73049411 73049569 -72539719 + MER112 DNA MER1_type 23 179 -81 2226 111 0 37 chr10 73049569 73049893 -72539395 + AluSx SINE Alu 1 312 0 597 276 35 48 chr10 73049893 73049962 -72539326 + MER112 DNA MER1_type 179 247 -13 206 261 15 62 chr10 73050123 73050188 -72539100 + L2 LINE L2 3022 3083 -189 1394 179 33 55 chr10 73050238 73050545 -72538743 - AluJo SINE Alu -12 300 1 2195 114 0 13 chr10 73050555 73050863 -72538425 - AluSg SINE Alu -6 304 1 945 137 0 22 chr10 73051264 73051403 -72537885 + AluJ SINE Alu 1 136 -176 235 114 68 0 chr10 73051404 73051448 -72537840 + L1PA14 LINE L1 5928 5974 -187 809 155 31 0 chr10 73051449 73051578 -72537710 + AluSq/x SINE Alu 1 133 -179 1440 90 16 0 chr10 73051581 73051770 -72537518 + L1PA14 LINE L1 5959 6150 -11 210 37 0 0 chr10 73051775 73051802 -72537486 + (CA)n Simple_repeat Simple_repeat 2 28 0 204 111 0 0 chr10 73051909 73051945 -72537343 + (TA)n Simple_repeat Simple_repeat 1 36 0 1149 148 0 0 chr10 73052034 73052210 -72537078 + AluJb SINE Alu 121 296 -16 875 70 0 0 chr10 73052363 73052463 -72536825 - AluSg/x SINE Alu -144 168 69 1362 152 0 0 chr10 73052465 73052662 -72536626 - AluSg SINE Alu -113 197 1 2270 84 7 10 chr10 73052781 73053089 -72536199 + AluSc SINE Alu 1 307 -2 49 66 0 0 chr10 73053432 73053523 -72535765 + GC_rich Low_complexity Low_complexity 1 91 0 2350 84 3 10 chr10 73053754 73054063 -72535225 - AluSp SINE Alu -6 307 1 265 136 0 99 chr10 73054102 73054183 -72535105 + AluS SINE Alu 1 73 -230 216 267 12 12 chr10 73054526 73054612 -72534676 + CT-rich Low_complexity Low_complexity 3 88 0 469 121 0 15 chr10 73054972 73055038 -72534250 - AluS SINE Alu -247 66 2 1137 251 7 14 chr10 73055045 73055320 -72533968 - AluSg SINE Alu -14 296 24 359 310 15 36 chr10 73055491 73055922 -72533366 + CT-rich Low_complexity Low_complexity 1 422 0 5245 123 10 23 chr10 73056457 73057397 -72531891 - L1PB1 LINE L1 -74 6077 5149 1052 207 30 42 chr10 73058343 73058554 -72530734 - L1MDa LINE L1 -5156 1384 1177 3831 143 4 2 chr10 73058554 73059107 -72530181 + MER41A LTR ERV1 1 554 0 1052 207 30 42 chr10 73059107 73059228 -72530060 - L1MDa LINE L1 -5363 1177 1056 682 241 44 35 chr10 73059410 73059638 -72529650 - MER67C LTR ERV1 -311 399 170 2294 98 0 0 chr10 73060394 73060689 -72528599 - AluSx SINE Alu -17 295 1 21 0 0 0 chr10 73061281 73061302 -72527986 + AT_rich Low_complexity Low_complexity 1 21 0 23 87 0 0 chr10 73061370 73061416 -72527872 + AT_rich Low_complexity Low_complexity 1 46 0 24 0 0 0 chr10 73061622 73061646 -72527642 + AT_rich Low_complexity Low_complexity 1 24 0 423 344 49 27 chr10 73061894 73062118 -72527170 - MLT1H LTR MaLR -237 312 84 26 50 0 0 chr10 73062285 73062325 -72526963 + AT_rich Low_complexity Low_complexity 1 40 0 520 87 0 0 chr10 73063596 73063665 -72525623 + MSTA LTR MaLR 360 428 0 664 134 31 16 chr10 73063668 73063795 -72525493 + L1MC1 LINE L1 6013 6141 -192 654 232 0 0 chr10 73063815 73063953 -72525335 + L1MC1 LINE L1 6130 6267 -66 6233 121 1 206 chr10 73063961 73065824 -72523464 + L1P LINE L1 2 1482 -4664 2124 253 49 41 chr10 73065977 73066889 -72522399 - L1M1 LINE L1 -4705 2860 2010 1158 197 56 7 chr10 73068061 73068330 -72520958 + L1MB4 LINE L1 5710 5991 -189 21 57 0 0 chr10 73069019 73069054 -72520234 + AT_rich Low_complexity Low_complexity 1 35 0 227 282 124 66 chr10 73069139 73069380 -72519908 - L1MC/D LINE L1 -1987 5821 5567 5578 109 25 12 chr10 73070907 73071837 -72517451 + L1PA13 LINE L1 5206 6145 -18 562 67 0 0 chr10 73074439 73074514 -72514774 - L1PA11 LINE L1 0 6174 6100 211 232 24 24 chr10 73075056 73075138 -72514150 + (TAAA)n Simple_repeat Simple_repeat 2 83 0 372 325 73 29 chr10 73076867 73077073 -72512215 + L2 LINE L2 2508 2722 -592 243 0 0 0 chr10 73077108 73077135 -72512153 + (CA)n Simple_repeat Simple_repeat 1 27 0 784 267 73 76 chr10 73077329 73077884 -72511404 + MLT1E2 LTR MaLR 1 623 -3 274 162 27 27 chr10 73078415 73078489 -72510799 + CT-rich Low_complexity Low_complexity 3 76 0 1141 244 120 7 chr10 73078663 73078962 -72510326 + MER21B LTR ERV1 20 352 -511 606 182 91 45 chr10 73078989 73079143 -72510145 + MER21B LTR ERV1 685 845 -18 1653 234 21 58 chr10 73079654 73080170 -72509118 + MER82 DNA MER2_type 157 653 0 5167 102 10 48 chr10 73080771 73081601 -72507687 + L1PB1 LINE L1 5350 6147 -4 599 201 33 44 chr10 73081601 73081855 -72507433 - L1MC/D LINE L1 -840 5306 5071 21 71 0 0 chr10 73082761 73082803 -72506485 + AT_rich Low_complexity Low_complexity 1 42 0 258 291 123 49 chr10 73083008 73083252 -72506036 + Charlie8 DNA MER1_type 4 265 -2152 1597 132 0 12 chr10 73083718 73083969 -72505319 + MER9 LTR ERVK 264 511 0 471 260 0 77 chr10 73083974 73084155 -72505133 - L1MC/D LINE L1 -3294 2852 2686 228 194 0 108 chr10 73084303 73084432 -72504856 + CT-rich Low_complexity Low_complexity 2 116 0 23 54 0 0 chr10 73084892 73084929 -72504359 + AT_rich Low_complexity Low_complexity 1 37 0 768 336 27 8 chr10 73085549 73085918 -72503370 + HERV16 LTR ERVL 964 1339 -3657 1640 186 62 83 chr10 73086757 73086833 -72502455 + MER44D DNA MER2_type 32 108 -2379 2043 116 25 0 chr10 73086833 73087137 -72502151 - AluSx SINE Alu 0 311 1 1640 186 62 83 chr10 73087137 73087587 -72501701 + MER44D DNA MER2_type 108 603 -2 279 298 131 25 chr10 73087671 73087869 -72501419 - L2 LINE L2 -830 2484 2266 7311 60 6 0 chr10 73088335 73090070 -72499218 + L1PA7 LINE L1 4436 6152 -2 346 275 87 7 chr10 73090549 73090698 -72498590 - MLT1A2 LTR MaLR -24 350 190 24 0 0 0 chr10 73090735 73090759 -72498529 + AT_rich Low_complexity Low_complexity 1 24 0 1629 90 0 5 chr10 73090991 73091213 -72498075 - AluSg/x SINE Alu -10 300 80 2266 109 0 0 chr10 73091213 73091505 -72497783 - AluSx SINE Alu -19 293 1 747 165 31 0 chr10 73091507 73091634 -72497654 - AluJo/FLAM SINE Alu -179 133 3 2232 93 0 0 chr10 73091647 73091926 -72497362 - AluSg SINE Alu -20 290 12 1173 137 6 0 chr10 73091926 73092101 -72497187 + AluSp SINE Alu 136 311 -2 530 286 110 10 chr10 73092103 73092393 -72496895 + L2 LINE L2 2740 3073 -240 1184 126 0 11 chr10 73092418 73092636 -72496652 - AluSc SINE Alu 0 309 123 241 120 11 54 chr10 73092683 73092775 -72496513 + (CCCCCG)n Simple_repeat Simple_repeat 1 88 0 181 138 17 17 chr10 73092812 73092870 -72496418 + (TGG)n Simple_repeat Simple_repeat 2 59 0 843 134 8 0 chr10 73093368 73093495 -72495793 + AluSp/q SINE Alu 175 302 -11 1693 141 28 14 chr10 73093739 73094023 -72495265 - AluJb SINE Alu -12 300 13 760 175 21 14 chr10 73094621 73094764 -72494524 - AluJb SINE Alu -24 288 145 2238 110 3 10 chr10 73094788 73095097 -72494191 - AluSq SINE Alu -6 307 1 649 178 96 0 chr10 73095098 73095244 -72494044 + AluJb SINE Alu 115 274 -38 304 109 0 0 chr10 73095384 73095430 -72493858 + AluSc SINE Alu 251 296 -3 2203 107 0 0 chr10 73095433 73095722 -72493566 + AluSg SINE Alu 1 289 -21 1113 132 0 12 chr10 73095875 73096042 -72493246 - AluSg/x SINE Alu -11 299 135 1830 144 3 7 chr10 73096042 73096326 -72492962 - AluSq SINE Alu -29 284 2 2028 135 7 3 chr10 73096334 73096623 -72492665 - AluSg SINE Alu -20 290 1 661 210 0 0 chr10 73096709 73096828 -72492460 + FLAM_C SINE Alu 1 119 -24 216 0 0 0 chr10 73096830 73096854 -72492434 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 2105 97 7 31 chr10 73096854 73097142 -72492146 - AluSq SINE Alu -32 281 1 180 111 0 0 chr10 73097169 73097196 -72492092 + (CCA)n Simple_repeat Simple_repeat 3 29 0 1555 195 20 7 chr10 73098397 73098700 -72490588 - AluJo SINE Alu -5 307 1 2375 97 0 7 chr10 73098711 73099021 -72490267 - AluSc SINE Alu -1 308 1 729 156 16 8 chr10 73099115 73099243 -72490045 + FLAM_C SINE Alu 2 130 -13 2039 137 3 7 chr10 73099251 73099550 -72489738 + AluSx SINE Alu 1 298 -14 1951 116 13 60 chr10 73099553 73099871 -72489417 + AluSx SINE Alu 1 303 -9 1436 142 0 14 chr10 73100156 73100375 -72488913 + AluJb SINE Alu 73 288 -24 226 200 0 0 chr10 73100375 73100415 -72488873 + G-rich Low_complexity Low_complexity 1 40 0 267 54 0 0 chr10 73100439 73100476 -72488812 + (C)n Simple_repeat Simple_repeat 1 37 0 30 27 0 0 chr10 73101154 73101191 -72488097 + GC_rich Low_complexity Low_complexity 1 37 0 233 214 0 57 chr10 73102222 73102292 -72486996 + CT-rich Low_complexity Low_complexity 2 67 0 232 292 11 11 chr10 73103530 73103619 -72485669 + CT-rich Low_complexity Low_complexity 2 90 0 2244 116 0 0 chr10 73104236 73104530 -72484758 - AluSx SINE Alu -13 299 6 746 330 14 0 chr10 73104705 73105002 -72484286 - AluSx SINE Alu -1 301 1 470 151 0 0 chr10 73105687 73105760 -72483528 - AluS SINE Alu -233 76 4 1976 156 0 0 chr10 73105791 73106092 -72483196 + AluSx SINE Alu 1 301 -11 2152 114 0 0 chr10 73106150 73106431 -72482857 + AluSx SINE Alu 1 281 -31 252 163 0 0 chr10 73106460 73106509 -72482779 + AluSp/q SINE Alu 253 301 -2 209 135 19 0 chr10 73107438 73107490 -72481798 + A-rich Low_complexity Low_complexity 3 55 0 1346 258 75 12 chr10 73107672 73108087 -72481201 + LTR47B LTR ERVL 3 443 0 358 346 22 28 chr10 73108101 73108283 -72481005 + LTR47B-int LTR ERVL 15 195 -5148 2314 96 0 3 chr10 73108442 73108745 -72480543 + AluSq SINE Alu 2 303 -10 2309 104 0 0 chr10 73109421 73109718 -72479570 - AluSx SINE Alu -15 297 1 204 67 0 0 chr10 73109940 73109970 -72479318 + (TTAAA)n Simple_repeat Simple_repeat 3 32 0 1982 130 33 0 chr10 73110082 73110382 -72478906 + AluSg SINE Alu 1 310 0 2118 147 0 6 chr10 73110528 73110840 -72478448 + AluSx SINE Alu 1 310 -2 1818 68 0 5 chr10 73110841 73111060 -72478228 + AluSc SINE Alu 83 300 -9 1227 172 3 109 chr10 73111064 73111402 -72477886 + AluSc SINE Alu 3 304 -5 2089 128 16 3 chr10 73111459 73111765 -72477523 - AluSx SINE Alu -1 311 2 933 194 0 46 chr10 73111777 73111973 -72477315 - AluJb SINE Alu -5 307 121 8167 57 5 2 chr10 73112002 73112965 -72476323 + LTR5 LTR ERVK 1 966 -3 207 167 0 0 chr10 73113669 73113705 -72475583 + (CCG)n Simple_repeat Simple_repeat 2 37 0 664 56 22 0 chr10 73114066 73114156 -72475132 + AluS SINE Alu 2 93 -220 1197 126 22 0 chr10 73114384 73114567 -72474721 - AluSq SINE Alu -126 187 1 1797 142 8 4 chr10 73114612 73114879 -72474409 + AluSx SINE Alu 44 311 -1 1167 146 44 5 chr10 73115425 73115631 -72473657 - MER20 DNA MER1_type -4 215 2 2191 92 7 3 chr10 73115755 73116039 -72473249 - AluSc SINE Alu -20 289 5 725 203 8 0 chr10 73116043 73116171 -72473117 - FLAM_A SINE Alu -1 132 4 2260 91 3 3 chr10 73116881 73117189 -72472099 + AluSp SINE Alu 1 308 0 2350 105 0 0 chr10 73117515 73117820 -72471468 + AluSc SINE Alu 1 305 -4 1216 209 6 90 chr10 73117881 73118192 -72471096 + AluJo SINE Alu 9 293 -19 2283 101 0 7 chr10 73118239 73118536 -72470752 - AluSg SINE Alu -15 295 1 1668 163 45 28 chr10 73118785 73119073 -72470215 - AluJb SINE Alu -19 293 1 2311 96 10 6 chr10 73119106 73119418 -72469870 - AluSp SINE Alu 0 313 1 238 160 0 40 chr10 73119429 73119479 -72469809 - Alu SINE Alu 0 300 253 * 1838 185 25 86 chr10 73119476 73119693 -72469595 + LTR54 LTR ERV1 18 247 -263 261 109 0 0 chr10 73119693 73119739 -72469549 + (ATTG)n Simple_repeat Simple_repeat 2 47 0 1943 97 32 18 chr10 73119741 73120019 -72469269 - AluSx SINE Alu -30 282 1 1838 185 25 86 chr10 73120019 73120322 -72468966 + LTR54 LTR ERV1 248 509 -1 342 109 0 0 chr10 73120322 73120377 -72468911 + L1MD2 LINE L1 6305 6359 0 717 95 0 0 chr10 73120387 73120482 -72468806 + AluSq SINE Alu 2 96 -217 924 70 0 0 chr10 73120484 73120598 -72468690 + AluSp/q SINE Alu 186 299 -14 21 0 0 0 chr10 73121743 73121764 -72467524 + AT_rich Low_complexity Low_complexity 1 21 0 943 176 47 10 chr10 73121807 73122000 -72467288 - MER2 DNA MER2_type 0 345 146 2012 111 21 0 chr10 73122082 73122371 -72466917 + AluSc SINE Alu 1 295 -14 286 88 0 53 chr10 73122371 73122428 -72466860 + (GGGGA)n Simple_repeat Simple_repeat 3 56 0 213 39 0 0 chr10 73122446 73122472 -72466816 + (GGAA)n Simple_repeat Simple_repeat 4 29 0 2129 100 0 7 chr10 73122507 73122808 -72466480 + AluSq SINE Alu 15 313 0 699 183 0 24 chr10 73122901 73123027 -72466261 + AluJo/FLAM SINE Alu 5 127 -185 2011 121 3 16 chr10 73123027 73123332 -72465956 + AluSx SINE Alu 1 301 -11 2074 124 7 0 chr10 73123400 73123707 -72465581 + AluSx SINE Alu 1 309 -3 786 275 42 21 chr10 73123707 73123943 -72465345 + MIR SINE MIR 22 262 0 863 171 0 13 chr10 73124708 73124866 -72464422 - FRAM SINE Alu -11 165 10 1753 146 0 10 chr10 73125506 73125794 -72463494 - AluSg SINE Alu -1 309 25 670 169 8 8 chr10 73125809 73125927 -72463361 - FLAM_C SINE Alu -10 133 16 283 154 0 0 chr10 73126221 73126273 -72463015 - AluSx SINE Alu 0 308 257 1409 205 3 19 chr10 73126310 73126617 -72462671 + AluJo SINE Alu 1 302 -10 1881 119 0 0 chr10 73128230 73128498 -72460790 - AluSx SINE Alu -33 279 12 192 77 0 0 chr10 73128541 73128567 -72460721 + (TCCC)n Simple_repeat Simple_repeat 2 27 0 207 329 0 12 chr10 73129045 73129130 -72460158 + G-rich Low_complexity Low_complexity 4 87 0 * 294 215 25 63 chr10 73129073 73129231 -72460057 + (AGGTG)n Simple_repeat Simple_repeat 4 155 0 857 124 84 22 chr10 73129652 73129830 -72459458 + AluSg/x SINE Alu 107 295 -17 569 174 27 87 chr10 73129830 73129979 -72459309 - AluJo SINE Alu -100 212 73 2439 55 0 10 chr10 73130202 73130514 -72458774 - AluY SINE Alu -2 309 1 1000 82 30 0 chr10 73130516 73130651 -72458637 - AluSg1 SINE Alu -169 140 2 292 274 14 0 chr10 73131173 73131246 -72458042 + L2 LINE L2 2200 2273 -1041 243 36 0 0 chr10 73131247 73131275 -72458013 - L1MC4 LINE L1 -1051 6991 6964 259 179 0 4 chr10 73131277 73131335 -72457953 - L1MC/D LINE L1 -414 5752 5709 236 220 209 0 chr10 73131372 73131463 -72457825 + L2 LINE L2 2926 3035 -278 835 185 12 12 chr10 73131485 73131647 -72457641 + AluSg/x SINE Alu 130 291 -21 1787 125 4 0 chr10 73131666 73131930 -72457358 + AluSq SINE Alu 37 301 -12 235 350 120 15 chr10 73131930 73132204 -72457084 - L2 LINE L2 -1110 2204 1902 4565 70 14 7 chr10 73132348 73132417 -72456871 + LTR10C LTR ERV1 1 68 -523 2301 76 0 3 chr10 73132417 73132719 -72456569 - AluY SINE Alu -10 301 1 4565 70 14 7 chr10 73132719 73133236 -72456052 + LTR10C LTR ERV1 68 591 0 351 113 42 0 chr10 73133342 73133413 -72455875 + (TA)n Simple_repeat Simple_repeat 1 74 0 232 221 0 53 chr10 73133414 73133509 -72455779 - L1MC4 LINE L1 -1339 6703 6614 * 265 239 45 0 chr10 73133427 73133515 -72455773 + L1MC4 LINE L1 6612 6703 -1339 2056 97 3 32 chr10 73133516 73133826 -72455462 - AluSq SINE Alu -12 301 1 243 0 0 0 chr10 73133838 73133865 -72455423 + (T)n Simple_repeat Simple_repeat 1 27 0 2365 47 0 7 chr10 73134033 73134333 -72454955 + AluY SINE Alu 1 298 -13 244 224 0 0 chr10 73134333 73134391 -72454897 - Tigger7 DNA MER2_type -2385 102 45 444 246 38 16 chr10 73134403 73134561 -72454727 + MER21B LTR ERV1 1 201 -404 1734 230 108 11 chr10 73134680 73135145 -72454143 + MER21B LTR ERV1 342 851 -12 2233 106 3 3 chr10 73135242 73135553 -72453735 - AluSq SINE Alu -2 311 1 828 160 21 85 chr10 73135555 73135743 -72453545 - FRAM SINE Alu 0 40 1 1622 126 0 0 chr10 73135977 73136223 -72453065 - AluSg SINE Alu -3 307 62 470 293 10 20 chr10 73136913 73137111 -72452177 + AluSq SINE Alu 110 305 -8 38 66 0 0 chr10 73137113 73137174 -72452114 + AT_rich Low_complexity Low_complexity 1 61 0 482 220 10 0 chr10 73137225 73137325 -72451963 + Tigger7 DNA MER2_type 4 104 -601 1029 89 0 27 chr10 73137328 73137462 -72451826 + AluSq/x SINE Alu 3 134 -178 2159 122 0 0 chr10 73137462 73137773 -72451515 + AluSp SINE Alu 1 311 -2 1029 89 0 27 chr10 73137773 73137784 -72451504 + AluSq/x SINE Alu 134 144 -168 2090 100 3 3 chr10 73137787 73138076 -72451212 + AluSc SINE Alu 1 289 -20 264 181 20 3 chr10 73138129 73138188 -72451100 + L1MC/D LINE L1 5541 5599 -734 1611 160 38 0 chr10 73138189 73138477 -72450811 + AluSx SINE Alu 1 299 -13 2479 40 0 7 chr10 73138515 73138817 -72450471 - AluYa5 SINE Alu -11 300 1 1023 96 0 0 chr10 73138818 73138954 -72450334 - AluSq/x SINE Alu -177 136 1 1147 204 27 15 chr10 73139013 73139097 -72450191 + AluJo SINE Alu 34 116 -196 194 0 39 0 chr10 73139097 73139123 -72450165 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1915 125 3 7 chr10 73139133 73139437 -72449851 + AluSx SINE Alu 1 303 -9 1147 204 27 15 chr10 73139437 73139601 -72449687 + AluJo SINE Alu 124 296 -16 401 99 0 234 chr10 73139721 73139832 -72449456 + AluJ SINE Alu 21 105 -197 1940 87 4 4 chr10 73139851 73140150 -72449138 - AluSx SINE Alu 0 316 18 21 36 0 0 chr10 73140165 73140193 -72449095 + AT_rich Low_complexity Low_complexity 1 28 0 246 189 0 0 chr10 73140415 73140452 -72448836 - AluSx SINE Alu -262 37 1 1014 171 6 0 chr10 73140458 73140633 -72448655 + AluJ SINE Alu 115 290 -22 1486 116 5 0 chr10 73141535 73141750 -72447538 - AluSq SINE Alu -11 302 87 714 159 0 40 chr10 73141820 73141946 -72447342 + FLAM_C SINE Alu 2 122 -21 222 62 0 0 chr10 73141966 73141998 -72447290 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 2741 3 0 7 chr10 73142035 73142344 -72446944 + AluYa5 SINE Alu 1 307 -4 2049 122 0 3 chr10 73142435 73142739 -72446549 + AluSq SINE Alu 1 303 -10 547 171 34 26 chr10 73142743 73142860 -72446428 + FLAM_C SINE Alu 1 118 -15 25 0 0 0 chr10 73142860 73142885 -72446403 + AT_rich Low_complexity Low_complexity 1 25 0 1287 169 9 4 chr10 73142885 73143116 -72446172 + AluSg/x SINE Alu 79 310 0 1794 137 35 0 chr10 73143289 73143574 -72445714 + AluSx SINE Alu 3 297 -15 1667 154 21 14 chr10 73143594 73143880 -72445408 + AluSx SINE Alu 1 288 -24 2043 108 0 3 chr10 73143894 73144181 -72445107 + AluSg SINE Alu 1 286 -24 578 256 33 22 chr10 73144201 73144381 -72444907 - L1ME LINE L1 -425 5696 5515 1182 128 11 0 chr10 73144424 73144603 -72444685 - AluSq SINE Alu -20 293 113 233 214 0 57 chr10 73145354 73145424 -72443864 + CT-rich Low_complexity Low_complexity 2 67 0 232 292 11 11 chr10 73146659 73146748 -72442540 + CT-rich Low_complexity Low_complexity 2 90 0 2124 116 0 0 chr10 73147365 73147659 -72441629 - AluSx SINE Alu -13 299 6 2041 127 13 0 chr10 73147831 73148131 -72441157 - AluSx SINE Alu -8 304 1 1584 159 3 44 chr10 73148425 73148720 -72440568 + AluJo SINE Alu 16 298 -14 1383 184 53 14 chr10 73148879 73149162 -72440126 + AluJb SINE Alu 3 296 -16 198 0 0 0 chr10 73149162 73149184 -72440104 + (TA)n Simple_repeat Simple_repeat 2 23 0 607 286 64 26 chr10 73150562 73150796 -72438492 - MIR SINE MIR -13 249 7 224 256 176 0 chr10 73150887 73150982 -72438306 - MIR SINE MIR -57 151 42 1527 97 5 0 chr10 73151075 73151281 -72438007 - AluSp SINE Alu -106 207 1 24 32 0 0 chr10 73151284 73151315 -72437973 + AT_rich Low_complexity Low_complexity 1 31 0 559 206 0 66 chr10 73151323 73151459 -72437829 + AluSp/q SINE Alu 174 300 -13 1833 103 4 19 chr10 73151609 73151870 -72437418 - AluSp SINE Alu -56 257 1 260 91 0 0 chr10 73151872 73151905 -72437383 - Alu SINE Alu -270 33 1 2162 84 0 56 chr10 73151905 73152225 -72437063 - AluSq SINE Alu -11 302 1 1134 182 5 0 chr10 73152353 73152556 -72436732 + AluJb SINE Alu 100 303 -9 188 235 0 78 chr10 73152646 73152697 -72436591 + L2 LINE L2 3209 3255 -17 2514 58 0 6 chr10 73152859 73153172 -72436116 - AluY SINE Alu 0 311 1 675 222 76 6 chr10 73153320 73153491 -72435797 + AluJo SINE Alu 120 302 -10 1604 119 75 32 chr10 73153668 73153790 -72435498 - L1PA16 LINE L1 -9 6157 6042 2476 65 0 0 chr10 73153790 73154098 -72435190 - AluSx SINE Alu -4 308 1 1604 119 75 32 chr10 73154098 73154253 -72435035 - L1PA16 LINE L1 -124 6042 5868 2230 82 0 13 chr10 73154324 73154627 -72434661 - AluY SINE Alu -12 299 1 249 42 42 21 chr10 73154652 73154700 -72434588 + (TTTTA)n Simple_repeat Simple_repeat 2 50 0 2093 99 3 0 chr10 73154702 73154984 -72434304 - AluSx SINE Alu -29 283 1 1506 127 147 0 chr10 73154987 73155259 -72434029 - AluSg SINE Alu 0 309 2 1106 68 0 0 chr10 73155259 73155392 -72433896 - AluSg SINE Alu -177 133 1 663 203 0 8 chr10 73155396 73155519 -72433769 - FLAM_C SINE Alu -11 122 1 1746 157 10 3 chr10 73155532 73155832 -72433456 + AluJb SINE Alu 1 302 -10 211 106 106 21 chr10 73158497 73158544 -72430744 + MIR SINE MIR 156 206 -56 2097 112 0 0 chr10 73158796 73159132 -72430156 + AluSq SINE Alu 1 336 0 1758 128 33 0 chr10 73159139 73159454 -72429834 + AluSq SINE Alu 1 324 0 2242 57 4 0 chr10 73159454 73159778 -72429510 + AluY SINE Alu 1 325 0 1749 151 24 0 chr10 73159788 73160079 -72429209 + AluSx SINE Alu 1 298 -14 1651 183 3 7 chr10 73160094 73160400 -72428888 + AluJo SINE Alu 1 305 -7 1854 141 0 43 chr10 73160435 73160623 -72428665 - AluSx SINE Alu 0 312 142 2281 60 10 7 chr10 73160623 73160922 -72428366 - AluY SINE Alu -11 300 1 1854 141 0 43 chr10 73160922 73161059 -72428229 - AluSx SINE Alu -170 142 1 1147 204 27 15 chr10 73161118 73161202 -72428086 + AluJo SINE Alu 34 116 -196 194 0 39 0 chr10 73161202 73161228 -72428060 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1928 122 3 7 chr10 73161238 73161542 -72427746 + AluSx SINE Alu 1 303 -9 1147 204 27 15 chr10 73161542 73161706 -72427582 + AluJo SINE Alu 124 296 -16 401 99 0 234 chr10 73161826 73161937 -72427351 + FLAM_C SINE Alu 21 105 -28 1019 97 0 7 chr10 73161956 73162133 -72427155 - AluSg/x SINE Alu 0 316 141 721 188 7 14 chr10 73162382 73162520 -72426768 - AluJo SINE Alu -174 138 2 898 107 0 14 chr10 73162737 73162877 -72426411 + AluSg/x SINE Alu 162 299 -11 201 78 20 59 chr10 73163161 73163212 -72426076 + (GGAGA)n Simple_repeat Simple_repeat 2 50 0 558 143 0 48 chr10 73163343 73163448 -72425840 + HY3 scRNA scRNA 1 100 -1 23 33 0 0 chr10 73163760 73163790 -72425498 + AT_rich Low_complexity Low_complexity 1 30 0 2043 96 34 3 chr10 73164208 73164500 -72424788 - AluSx SINE Alu -11 301 1 25 0 0 0 chr10 73164500 73164525 -72424763 + AT_rich Low_complexity Low_complexity 1 25 0 1135 57 0 7 chr10 73164617 73164861 -72424427 - AluY SINE Alu -9 302 2 2040 123 3 0 chr10 73164862 73165164 -72424124 - AluSx SINE Alu -9 303 1 537 173 0 39 chr10 73165244 73165348 -72423940 + AluJ SINE Alu 44 143 -169 923 191 23 0 chr10 73165381 73165554 -72423734 + AluJ SINE Alu 131 307 -5 1244 153 149 11 chr10 73165677 73165938 -72423350 + AluSg1 SINE Alu 1 297 -12 2103 107 0 0 chr10 73165938 73166252 -72423036 + AluSg1 SINE Alu 1 314 0 1613 119 101 14 chr10 73166372 73166650 -72422638 + AluSg SINE Alu 1 302 -8 2306 73 13 0 chr10 73167255 73167558 -72421730 - AluSq SINE Alu -6 307 1 2365 75 7 0 chr10 73168720 73169027 -72420261 + AluSp SINE Alu 2 310 -3 1064 231 56 25 chr10 73169028 73169235 -72420053 + L1ME1 LINE L1 5816 6036 -130 1688 149 20 14 chr10 73169235 73169371 -72419917 + AluSx SINE Alu 1 135 -177 2246 102 0 0 chr10 73169371 73169676 -72419612 + AluY SINE Alu 1 305 -6 1688 149 20 14 chr10 73169676 73169834 -72419454 + AluSx SINE Alu 135 297 -15 1064 231 56 25 chr10 73169834 73169912 -72419376 + L1ME1 LINE L1 6036 6110 -56 1545 145 7 18 chr10 73169948 73170230 -72419058 - AluSx SINE Alu -33 279 1 1900 135 0 7 chr10 73170315 73170612 -72418676 - AluSx SINE Alu -17 295 1 1081 157 5 16 chr10 73170664 73170855 -72418433 + AluSx SINE Alu 11 199 -113 2156 55 0 24 chr10 73170876 73171165 -72418123 + AluY SINE Alu 11 292 -19 2021 111 16 10 chr10 73171166 73171473 -72417815 + AluSc SINE Alu 1 309 0 22 35 0 0 chr10 73171473 73171502 -72417786 + AT_rich Low_complexity Low_complexity 1 29 0 792 147 14 21 chr10 73171537 73171680 -72417608 - MER33 DNA MER1_type -182 142 1 1408 169 12 89 chr10 73171806 73172132 -72417156 + AluJo SINE Alu 1 301 -1 2172 101 3 0 chr10 73172594 73172891 -72416397 + AluSp SINE Alu 1 298 -15 676 255 0 0 chr10 73173042 73173229 -72416059 - FRAM SINE Alu 0 187 1 1041 331 47 47 chr10 73173275 73174027 -72415261 - LTR57-int LTR ERVL -2507 2836 2085 1902 139 0 3 chr10 73174027 73174328 -72414960 + AluSx SINE Alu 1 300 -12 1875 145 10 3 chr10 73174329 73174639 -72414649 + AluSx SINE Alu 1 312 0 2212 103 3 3 chr10 73174698 73175010 -72414278 + AluSq SINE Alu 1 312 -1 2146 100 3 10 chr10 73175022 73175331 -72413957 + AluSp SINE Alu 1 307 -6 2241 68 3 10 chr10 73175467 73175785 -72413503 + AluSp SINE Alu 1 313 0 4582 66 8 8 chr10 73176029 73176618 -72412670 - LTR10C LTR ERV1 -2 589 1 216 200 0 0 chr10 73177266 73177311 -72411977 - L2 LINE L2 0 3313 3269 1229 229 42 17 chr10 73177497 73177634 -72411654 + AluJo SINE Alu 1 133 -169 1942 127 0 10 chr10 73177634 73177934 -72411354 + AluSx SINE Alu 1 297 -15 1229 229 42 17 chr10 73177934 73178084 -72411204 + AluJo SINE Alu 133 295 -7 2034 125 16 0 chr10 73178086 73178390 -72410898 + AluSq SINE Alu 3 311 -2 21 0 0 0 chr10 73178390 73178411 -72410877 + AT_rich Low_complexity Low_complexity 1 21 0 1930 125 0 0 chr10 73178442 73178779 -72410509 + AluSg SINE Alu 1 337 0 2238 101 3 0 chr10 73178859 73179155 -72410133 + AluSp SINE Alu 1 297 -16 2283 88 0 0 chr10 73179155 73179449 -72409839 + AluSg1 SINE Alu 1 294 -15 2139 117 0 0 chr10 73179581 73179881 -72409407 + AluSq SINE Alu 1 300 -13 936 89 0 0 chr10 73180070 73180194 -72409094 + AluSc SINE Alu 166 289 -20 1910 149 0 0 chr10 73181208 73181497 -72407791 + AluSx SINE Alu 1 289 -23 749 169 0 22 chr10 73181497 73181628 -72407660 - AluJo/FLAM SINE Alu -174 128 1 1777 152 3 0 chr10 73182093 73182376 -72406912 + AluSx SINE Alu 9 292 -20 2234 113 0 0 chr10 73182538 73182848 -72406440 - AluSg SINE Alu 0 310 1 1937 125 31 0 chr10 73182848 73183137 -72406151 - AluSg SINE Alu -12 298 1 793 138 15 8 chr10 73183140 73183270 -72406018 - AluSq/x SINE Alu -180 133 3 282 371 0 0 chr10 73183287 73183384 -72405904 + L2 LINE L2 2981 3077 -195 1632 117 3 139 chr10 73183500 73183852 -72405436 - AluSx SINE Alu -4 308 5 1456 197 16 7 chr10 73183923 73184227 -72405061 - AluJo SINE Alu -5 307 1 2255 97 0 6 chr10 73184238 73184549 -72404739 - AluSc SINE Alu 0 309 1 1095 152 5 16 chr10 73184570 73184761 -72404527 - AluSx SINE Alu -113 199 11 1900 135 0 7 chr10 73184813 73185110 -72404178 + AluSx SINE Alu 1 295 -17 1532 149 7 18 chr10 73185195 73185477 -72403811 + AluSx SINE Alu 1 279 -33 1036 234 56 25 chr10 73185513 73185591 -72403697 - L1ME1 LINE L1 -56 6110 6036 1705 146 20 14 chr10 73185591 73185749 -72403539 - AluSx SINE Alu -15 297 135 2238 102 0 0 chr10 73185749 73186053 -72403235 - AluY SINE Alu -7 304 1 1705 146 20 14 chr10 73186053 73186189 -72403099 - AluSx SINE Alu -177 135 1 1036 234 56 25 chr10 73186189 73186396 -72402892 - L1ME1 LINE L1 -130 6036 5816 1876 136 3 10 chr10 73186397 73186691 -72402597 - AluSx SINE Alu -3 309 18 1752 111 0 19 chr10 73186691 73186997 -72402291 + AluYa5 SINE Alu 1 301 -10 404 141 14 0 chr10 73187036 73187107 -72402181 - AluS SINE Alu -13 298 227 1586 122 4 0 chr10 73187207 73187436 -72401852 + AluSq SINE Alu 64 293 -20 578 256 33 22 chr10 73187479 73187659 -72401629 + L1ME LINE L1 5515 5696 -425 2043 108 0 3 chr10 73187679 73187966 -72401322 - AluSg SINE Alu -24 286 1 1624 161 21 14 chr10 73187980 73188266 -72401022 - AluSx SINE Alu -24 288 1 1778 140 35 0 chr10 73188285 73188570 -72400718 - AluSx SINE Alu -15 297 3 1307 164 9 4 chr10 73188743 73188974 -72400314 - AluSg/x SINE Alu 0 312 81 23 0 0 0 chr10 73188974 73188997 -72400291 + AT_rich Low_complexity Low_complexity 1 23 0 547 171 34 26 chr10 73188997 73189114 -72400174 - FLAM_C SINE Alu -15 118 1 2077 115 0 3 chr10 73189118 73189422 -72399866 - AluSq SINE Alu -10 303 1 222 62 0 0 chr10 73189537 73189569 -72399719 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 714 159 0 40 chr10 73189589 73189715 -72399573 - FLAM_C SINE Alu -21 122 2 1471 129 0 0 chr10 73189785 73189995 -72399293 + AluSg/x SINE Alu 87 296 -16 862 159 7 13 chr10 73190005 73190156 -72399132 + FRAM SINE Alu 8 157 -19 180 71 0 0 chr10 73190587 73190602 -72398686 + (TTTAA)n Simple_repeat Simple_repeat 3 20 -10 1926 111 7 14 chr10 73190602 73190899 -72398389 - AluSq SINE Alu -18 295 1 180 71 0 0 chr10 73190899 73190911 -72398377 + (TTTAA)n Simple_repeat Simple_repeat 19 30 0 1979 124 7 0 chr10 73190999 73191297 -72397991 - AluY SINE Alu -11 300 1 2050 111 0 33 chr10 73191299 73191606 -72397682 - AluSq SINE Alu -16 297 1 1965 116 48 0 chr10 73191752 73192045 -72397243 - AluSg SINE Alu -3 307 1 337 253 22 39 chr10 73192072 73192164 -72397124 - L1MC4 LINE L1 -1378 6944 6852 1546 157 50 7 chr10 73192164 73192444 -72396844 - AluJo SINE Alu -18 294 3 337 253 22 39 chr10 73192444 73192514 -72396774 - L1MC4 LINE L1 -1470 6852 1924 1910 121 10 7 chr10 73192525 73192823 -72396465 - AluSq SINE Alu -14 299 1 2108 97 0 13 chr10 73193147 73193447 -72395841 - AluSp SINE Alu -17 296 1 21 0 0 0 chr10 73193455 73193476 -72395812 + AT_rich Low_complexity Low_complexity 1 21 0 338 215 11 32 chr10 73193555 73193648 -72395640 - L1MEc LINE L1 -4452 1944 1854 1903 111 68 0 chr10 73193648 73193928 -72395360 - AluSx SINE Alu -13 299 1 219 125 0 0 chr10 73194046 73194086 -72395202 + (GGAA)n Simple_repeat Simple_repeat 3 42 0 2170 110 3 0 chr10 73194311 73194612 -72394676 - AluSp SINE Alu -11 302 1 2219 100 3 3 chr10 73194624 73194935 -72394353 - AluSq SINE Alu -2 311 1 1875 145 10 3 chr10 73194994 73195304 -72393984 - AluSx SINE Alu 0 312 1 1902 139 0 3 chr10 73195305 73195606 -72393682 - AluSx SINE Alu -12 300 1 1015 332 47 47 chr10 73195606 73196358 -72392930 + HERVL18 LTR ERVL 2085 2836 -2507 677 255 0 0 chr10 73196404 73196591 -72392697 + FRAM SINE Alu 1 187 0 2209 94 3 0 chr10 73196742 73197039 -72392249 - AluSp SINE Alu -15 298 1 1599 125 29 64 chr10 73197351 73197489 -72391799 + AluJo SINE Alu 2 143 -169 2067 110 0 19 chr10 73197489 73197798 -72391490 + AluSg SINE Alu 1 303 -7 1599 125 29 64 chr10 73197798 73197970 -72391318 + AluJo SINE Alu 143 301 -11 516 352 27 26 chr10 73198241 73198703 -72390585 + HERVL18 LTR ERVL 3610 4197 -1275 1976 137 0 3 chr10 73198810 73199110 -72390178 + AluSx SINE Alu 1 299 -13 1392 161 3 75 chr10 73199120 73199442 -72389846 + AluJo SINE Alu 1 299 -13 2039 92 14 17 chr10 73199541 73199834 -72389454 + AluSc SINE Alu 1 292 -17 1802 119 7 11 chr10 73200177 73200462 -72388826 + AluSx SINE Alu 12 295 -17 602 223 91 66 chr10 73200462 73200659 -72388629 - AluJo SINE Alu -100 212 11 420 20 0 0 chr10 73200671 73200720 -72388568 + (TCTA)n Simple_repeat Simple_repeat 1 49 0 2485 48 0 10 chr10 73200860 73201174 -72388114 - AluY SINE Alu 0 311 1 1000 82 30 0 chr10 73201176 73201311 -72387977 - AluSg1 SINE Alu -169 140 2 292 274 14 0 chr10 73201833 73201906 -72387382 + L2 LINE L2 2200 2273 -1041 243 36 0 0 chr10 73201907 73201935 -72387353 - L1MC4 LINE L1 -1051 6991 6964 259 179 0 4 chr10 73201937 73201995 -72387293 - L1MC/D LINE L1 -414 5752 5709 236 220 209 0 chr10 73202032 73202123 -72387165 + L2 LINE L2 2926 3035 -278 835 185 12 12 chr10 73202145 73202307 -72386981 + AluSg/x SINE Alu 130 291 -21 1761 119 11 11 chr10 73202326 73202595 -72386693 + AluSx SINE Alu 37 305 -7 189 0 0 0 chr10 73202595 73202616 -72386672 + (CA)n Simple_repeat Simple_repeat 2 22 0 1411 180 29 4 chr10 73202672 73202967 -72386321 - AluJb SINE Alu 0 306 5 1976 100 7 24 chr10 73202993 73203282 -72386006 - AluSc SINE Alu -25 284 1 395 261 31 102 chr10 73203302 73203528 -72385760 + L2 LINE L2 3080 3289 -24 600 197 29 58 chr10 73203689 73203826 -72385462 - FLAM_A SINE Alu -6 136 4 817 211 0 0 chr10 73203841 73203983 -72385305 - FRAM SINE Alu -22 154 13 284 57 0 0 chr10 73204132 73204167 -72385121 - tRNA-Gly-GGA tRNA tRNA -39 36 2 1882 110 35 0 chr10 73204188 73204310 -72384978 + AluSq SINE Alu 1 117 -196 207 0 0 0 chr10 73204310 73204333 -72384955 + (TAA)n Simple_repeat Simple_repeat 2 24 0 1882 110 35 0 chr10 73204333 73204492 -72384796 + AluSq SINE Alu 117 292 -21 241 236 0 42 chr10 73205359 73205431 -72383857 + GA-rich Low_complexity Low_complexity 2 70 0 23 54 0 0 chr10 73205781 73205818 -72383470 + GC_rich Low_complexity Low_complexity 1 37 0 1302 90 22 0 chr10 73207129 73207307 -72381981 - AluSp SINE Alu -131 182 1 2059 108 14 0 chr10 73208541 73208827 -72380461 + AluSc SINE Alu 1 290 -19 252 171 0 0 chr10 73208881 73208922 -72380366 + L2 LINE L2 3271 3311 -2 2256 82 7 7 chr10 73208948 73209252 -72380036 - AluSx SINE Alu -8 304 1 2055 128 0 0 chr10 73209337 73209642 -72379646 + AluSx SINE Alu 1 305 -7 1885 133 3 3 chr10 73209738 73209900 -72379388 - AluSx SINE Alu -19 293 129 2046 114 3 9 chr10 73209900 73210215 -72379073 - AluSp SINE Alu 0 313 1 1885 133 3 3 chr10 73210215 73210345 -72378943 - AluSx SINE Alu -182 130 1 2136 85 17 3 chr10 73210641 73210934 -72378354 + AluSc SINE Alu 1 297 -12 1355 165 16 90 chr10 73210934 73211091 -72378197 - AluJo SINE Alu -21 291 166 1857 146 0 3 chr10 73211091 73211392 -72377896 - AluSx SINE Alu -12 300 1 1355 165 16 90 chr10 73211392 73211547 -72377741 - AluJo SINE Alu -146 166 1 234 373 63 0 chr10 73211676 73211802 -72377486 + MIR SINE MIR 128 261 -1 206 268 62 71 chr10 73212669 73212781 -72376507 - MIR SINE MIR -37 225 115 1793 117 65 0 chr10 73212784 73213075 -72376213 - AluSx SINE Alu -2 310 1 346 250 0 13 chr10 73213121 73213197 -72376091 - AluJ/FLAM SINE Alu -227 75 1 283 311 133 33 chr10 73213197 73213377 -72375911 - MIR SINE MIR -15 247 50 21 36 0 0 chr10 73213694 73213722 -72375566 + AT_rich Low_complexity Low_complexity 1 28 0 1688 153 20 3 chr10 73213754 73214054 -72375234 + AluJo SINE Alu 1 305 -7 342 219 24 6 chr10 73214131 73214248 -72375040 - L1ME LINE L1 -5949 121 2 815 103 0 0 chr10 73214401 73214518 -72374770 - AluJb SINE Alu -195 117 1 1807 165 3 7 chr10 73214577 73214886 -72374402 - AluSx SINE Alu -4 308 1 1696 154 3 62 chr10 73215022 73215346 -72373942 - AluJb SINE Alu -7 305 1 1035 157 174 25 chr10 73215486 73215722 -72373566 + AluJo SINE Alu 28 298 -14 2308 94 3 0 chr10 73215757 73216065 -72373223 - AluSp SINE Alu 0 313 5 2040 95 3 11 chr10 73216535 73216851 -72372437 + AluY SINE Alu 1 314 0 2153 108 19 0 chr10 73216948 73217255 -72372033 + AluSq SINE Alu 1 313 0 295 355 120 43 chr10 73217565 73217864 -72371424 + L2 LINE L2 2926 3247 -25 2109 100 17 10 chr10 73217870 73218169 -72371119 + AluSc SINE Alu 5 305 -4 920 164 30 0 chr10 73218352 73218517 -72370771 - AluSg/x SINE Alu -9 303 134 2087 105 0 7 chr10 73218517 73218823 -72370465 - AluSq SINE Alu -6 307 4 2260 103 0 0 chr10 73218828 73219138 -72370150 - AluSx SINE Alu -2 310 1 2106 116 0 6 chr10 73219614 73219925 -72369363 + AluSx SINE Alu 4 312 0 806 191 89 0 chr10 73219925 73220082 -72369206 + AluJo/FRAM SINE Alu 129 299 -13 23 33 0 0 chr10 73220117 73220147 -72369141 + AT_rich Low_complexity Low_complexity 1 30 0 1306 205 7 7 chr10 73220524 73220827 -72368461 - AluSg SINE Alu -5 305 3 405 0 0 0 chr10 73220892 73220937 -72368351 + (CA)n Simple_repeat Simple_repeat 2 46 0 246 62 0 0 chr10 73220936 73220968 -72368320 + (TA)n Simple_repeat Simple_repeat 2 33 0 * 1025 118 12 6 chr10 73220937 73221122 -72368166 - AluSg/x SINE Alu -18 292 135 721 188 7 14 chr10 73221368 73221506 -72367782 - AluJo SINE Alu -174 138 2 204 40 0 0 chr10 73221903 73221928 -72367360 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 2292 109 0 0 chr10 73221955 73222267 -72367021 - AluSx SINE Alu 0 312 1 3037 152 55 55 chr10 73222436 73223040 -72366248 + L1MB4 LINE L1 5524 6130 -50 2012 118 21 7 chr10 73223040 73223327 -72365961 + AluSq SINE Alu 1 291 -22 3037 152 55 55 chr10 73223327 73223379 -72365909 + L1MB4 LINE L1 6129 6180 0 2035 114 44 0 chr10 73223624 73223921 -72365367 - AluSx SINE Alu -2 310 1 204 273 30 15 chr10 73227053 73227119 -72362169 - L2 LINE L2 -1 3312 3246 1626 193 0 18 chr10 73228425 73228710 -72360578 + AluJo SINE Alu 3 282 -30 714 293 89 7 chr10 73229216 73229663 -72359625 - LTR33 LTR ERVL -2 519 17 545 188 20 0 chr10 73229724 73229825 -72359463 + L1MD3 LINE L1 7869 7971 -24 1621 110 9 4 chr10 73230127 73230355 -72358933 + AluSp SINE Alu 1 229 -84 21 53 0 35 chr10 73230425 73230460 -72358828 + AT_rich Low_complexity Low_complexity 1 35 -20 1947 152 3 7 chr10 73230460 73230750 -72358538 - AluSx SINE Alu -23 289 1 21 53 0 35 chr10 73230750 73230771 -72358517 + AT_rich Low_complexity Low_complexity 35 55 0 474 259 0 0 chr10 73230815 73230953 -72358335 - FLAM_A SINE Alu 0 145 8 2119 130 0 0 chr10 73231020 73231320 -72357968 + AluSx SINE Alu 1 300 -12 192 40 0 0 chr10 73231530 73231555 -72357733 + (CAAAAA)n Simple_repeat Simple_repeat 2 26 0 1481 184 68 3 chr10 73232357 73232650 -72356638 - AluSx SINE Alu 0 312 1 301 138 25 0 chr10 73232709 73232789 -72356499 + (TA)n Simple_repeat Simple_repeat 2 83 0 2246 103 3 3 chr10 73232872 73233163 -72356125 - AluSc SINE Alu -18 291 1 2245 98 0 3 chr10 73233175 73233470 -72355818 - AluSg SINE Alu -16 294 1 2085 132 0 3 chr10 73233475 73233771 -72355517 - AluSx SINE Alu -17 295 1 26 0 0 0 chr10 73233771 73233797 -72355491 + AT_rich Low_complexity Low_complexity 1 26 0 675 155 16 47 chr10 73233797 73233926 -72355362 - FLAM_C SINE Alu -8 125 1 1167 209 21 46 chr10 73233931 73234100 -72355188 - AluJo SINE Alu -4 308 147 2409 78 3 0 chr10 73234100 73234396 -72354892 - AluSp SINE Alu -16 297 1 1167 209 21 46 chr10 73234396 73234509 -72354779 - AluJo SINE Alu -165 147 33 36 23 0 0 chr10 73234700 73234743 -72354545 + AT_rich Low_complexity Low_complexity 1 43 0 710 206 8 0 chr10 73234802 73234933 -72354355 + AluSq/x SINE Alu 2 133 -180 2282 106 0 0 chr10 73234937 73235238 -72354050 + AluY SINE Alu 1 301 -10 2012 123 13 29 chr10 73235238 73235554 -72353734 + AluSx SINE Alu 1 311 -1 1585 179 70 0 chr10 73235590 73235875 -72353413 - AluJb SINE Alu -7 305 1 2192 107 7 0 chr10 73235948 73236238 -72353050 + AluSg SINE Alu 1 292 -18 576 260 16 0 chr10 73236266 73236389 -72352899 + FAM SINE Alu 1 125 -60 892 249 0 0 chr10 73236389 73236566 -72352722 + AluJo SINE Alu 85 261 -51 859 100 0 17 chr10 73236586 73236774 -72352514 - AluSg/x SINE Alu 0 349 164 392 179 0 12 chr10 73236787 73236871 -72352417 + GA-rich Low_complexity Low_complexity 1 83 0 2207 116 7 0 chr10 73237026 73237327 -72351961 - AluSx SINE Alu -9 303 1 474 217 0 43 chr10 73237371 73237486 -72351802 + FLAM_C SINE Alu 23 132 -11 1946 161 3 0 chr10 73237551 73237855 -72351433 - AluJb SINE Alu -7 305 1 2254 90 3 10 chr10 73238592 73238893 -72350395 + AluSx SINE Alu 1 299 -13 816 138 0 51 chr10 73239460 73239598 -72349690 - AluSg/x SINE Alu -24 285 155 1415 187 0 0 chr10 73239601 73239831 -72349457 - AluJb SINE Alu -82 230 1 22 0 0 0 chr10 73239857 73239879 -72349409 + AT_rich Low_complexity Low_complexity 1 22 0 1875 122 28 11 chr10 73239882 73240168 -72349120 - AluSg SINE Alu -19 291 1 335 211 154 89 chr10 73240172 73240280 -72349008 - L1MC4 LINE L1 -44 7998 7898 2101 111 3 19 chr10 73240280 73240587 -72348701 - AluSq SINE Alu -9 304 3 335 211 154 89 chr10 73240587 73240599 -72348689 - L1MC4 LINE L1 -144 7898 7888 2158 82 62 21 chr10 73240599 73240890 -72348398 - AluSp SINE Alu -10 303 1 335 211 154 89 chr10 73240890 73241014 -72348274 - L1MC4 LINE L1 -154 7888 7737 238 67 0 67 chr10 73241024 73241069 -72348219 - L1MC4 LINE L1 -264 7778 7737 1176 183 234 41 chr10 73241070 73241481 -72347807 - L1MC4 LINE L1 -263 7779 7290 1221 197 7 81 chr10 73241485 73241655 -72347633 - AluJo SINE Alu -18 294 113 2463 64 0 0 chr10 73241655 73241950 -72347338 - AluY SINE Alu -16 295 1 2575 52 16 10 chr10 73241958 73242267 -72347021 - AluY SINE Alu 0 311 1 1221 197 7 81 chr10 73242267 73242382 -72346906 - AluJo SINE Alu -206 106 22 238 176 189 40 chr10 73242403 73242477 -72346811 - L1MC4a LINE L1 -599 7209 7125 2227 88 3 3 chr10 73242478 73242789 -72346499 - AluSp SINE Alu 0 311 1 753 196 75 35 chr10 73242853 73243026 -72346262 - AluJb SINE Alu -3 309 130 761 224 6 22 chr10 73243765 73243944 -72345344 + FRAM SINE Alu 1 176 0 1227 176 90 36 chr10 73244180 73244459 -72344829 - AluJb SINE Alu -18 294 1 693 185 130 20 chr10 73244502 73244702 -72344586 - L1MA7 LINE L1 0 6291 6070 249 300 0 0 chr10 73244716 73244786 -72344502 - L1ME2 LINE L1 -10 6154 6085 3231 196 80 47 chr10 73244794 73244854 -72344434 - L1MB8 LINE L1 -9 6169 6112 1982 116 41 7 chr10 73244854 73245148 -72344140 + AluSx SINE Alu 1 304 -8 3231 196 80 47 chr10 73245148 73246046 -72343242 - L1MB8 LINE L1 -66 6112 5180 496 137 14 0 chr10 73246098 73246171 -72343117 + AluJ/FLAM SINE Alu 2 75 -237 831 118 0 0 chr10 73246190 73246309 -72342979 - AluSp/q SINE Alu -16 297 179 1681 127 13 0 chr10 73246309 73246546 -72342742 + AluSx SINE Alu 64 303 -9 1818 161 66 216 chr10 73246869 73247109 -72342179 - L1MC4a LINE L1 0 7808 7534 747 108 0 0 chr10 73247109 73247220 -72342068 + (TTCC)n Simple_repeat Simple_repeat 4 114 0 1888 125 10 24 chr10 73247221 73247510 -72341778 - AluSx SINE Alu -27 285 1 1818 161 66 216 chr10 73247510 73247699 -72341589 - L1MC4a LINE L1 -274 7534 7318 685 210 0 0 chr10 73247699 73247823 -72341465 - FLAM_C SINE Alu -19 124 1 1818 161 66 216 chr10 73247823 73248302 -72340986 - L1MC4a LINE L1 -490 7318 6929 301 333 59 7 chr10 73248376 73248511 -72340777 + L3 LINE CR1 1425 1566 -11 1337 118 0 0 chr10 73249029 73249215 -72340073 - AluSg/x SINE Alu 0 312 127 2446 87 3 0 chr10 73249222 73249533 -72339755 - AluSp SINE Alu -1 312 1 2418 49 0 11 chr10 73249537 73249978 -72339310 - AluY SINE Alu 0 438 1 1700 168 13 22 chr10 73250749 73251064 -72338224 + AluJo SINE Alu 1 312 0 273 195 0 91 chr10 73251175 73251279 -72338009 - AluJ/FRAM SINE Alu 0 302 233 180 111 0 0 chr10 73251297 73251324 -72337964 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 745 151 0 0 chr10 73251325 73251444 -72337844 - FLAM_C SINE Alu -23 120 2 1958 129 24 7 chr10 73251455 73251793 -72337495 - AluSx SINE Alu 0 343 1 2103 107 3 42 chr10 73251939 73252070 -72337218 + AluSx SINE Alu 5 140 -172 2284 109 6 6 chr10 73252070 73252382 -72336906 + AluSx SINE Alu 1 312 0 2103 107 3 42 chr10 73252382 73252560 -72336728 + AluSx SINE Alu 140 302 -10 2053 110 7 32 chr10 73252590 73252900 -72336388 + AluSx SINE Alu 1 302 -10 213 39 0 0 chr10 73252927 73252953 -72336335 + (TTA)n Simple_repeat Simple_repeat 2 27 0 412 136 0 0 chr10 73252960 73253019 -72336269 - AluS SINE Alu -30 279 221 1255 100 6 6 chr10 73253021 73253191 -72336097 - AluSq SINE Alu -143 170 1 534 255 35 0 chr10 73253866 73254011 -72335277 + Charlie5 DNA MER1_type 50 199 -2413 2018 139 0 0 chr10 73254028 73254315 -72334973 + AluSx SINE Alu 2 288 -24 24 0 0 0 chr10 73254315 73254339 -72334949 + AT_rich Low_complexity Low_complexity 1 24 0 22 43 0 21 chr10 73254457 73254478 -72334810 + AT_rich Low_complexity Low_complexity 1 21 -25 2124 106 3 23 chr10 73254478 73254780 -72334508 - AluSc SINE Alu -13 296 1 22 43 0 21 chr10 73254780 73254805 -72334483 + AT_rich Low_complexity Low_complexity 21 46 0 1950 137 3 10 chr10 73255253 73255559 -72333729 - AluSq SINE Alu -9 304 1 315 282 276 18 chr10 73255582 73255838 -72333450 - L2 LINE L2 -1003 2311 2122 1705 186 7 7 chr10 73255838 73256145 -72333143 + AluJo SINE Alu 1 307 -5 315 282 276 18 chr10 73256145 73256345 -72332943 - L2 LINE L2 -1192 2122 1737 201 121 0 0 chr10 73256361 73256394 -72332894 + (T)n Simple_repeat Simple_repeat 1 33 0 706 112 78 9 chr10 73256394 73256510 -72332778 - AluY SINE Alu -179 132 9 2342 68 10 3 chr10 73256987 73257280 -72332008 + AluY SINE Alu 1 295 -16 204 97 0 0 chr10 73257780 73257811 -72331477 + (A)n Simple_repeat Simple_repeat 1 31 0 1823 122 0 0 chr10 73257899 73258154 -72331134 + AluSx SINE Alu 54 308 -4 22 35 0 0 chr10 73258268 73258297 -72330991 + AT_rich Low_complexity Low_complexity 1 29 0 1014 200 0 5 chr10 73258313 73258503 -72330785 - AluJb SINE Alu 0 312 124 333 70 0 0 chr10 73258503 73258546 -72330742 + MADE1 DNA Mariner 3 45 -35 675 133 62 78 chr10 73258546 73258674 -72330614 - AluSq/x SINE Alu -186 127 2 1433 158 0 18 chr10 73258897 73259125 -72330163 - AluJb SINE Alu -80 232 9 1930 102 15 98 chr10 73259701 73260036 -72329252 - AluSx SINE Alu -4 308 2 29 0 0 0 chr10 73260038 73260067 -72329221 + AT_rich Low_complexity Low_complexity 1 29 0 848 167 0 0 chr10 73260256 73260382 -72328906 + FLAM_C SINE Alu 1 126 -17 677 185 0 15 chr10 73260652 73260787 -72328501 + FLAM_C SINE Alu 1 133 0 831 185 229 15 chr10 73261404 73261609 -72327679 + AluJb SINE Alu 25 273 -39 309 26 0 0 chr10 73261926 73261964 -72327324 + (TG)n Simple_repeat Simple_repeat 1 38 0 1998 111 33 0 chr10 73261964 73262234 -72327054 - AluSx SINE Alu -33 279 1 658 129 0 35 chr10 73262460 73262576 -72326712 - AluSg/x SINE Alu -6 303 192 312 111 0 22 chr10 73262581 73262626 -72326662 + Alu SINE Alu 1 44 -257 549 133 12 0 chr10 73262626 73262709 -72326579 + AluSg/x SINE Alu 92 175 -137 1392 126 5 5 chr10 73262817 73263023 -72326265 + AluSg/x SINE Alu 94 299 -13 2197 108 3 0 chr10 73263051 73263338 -72325950 + AluSx SINE Alu 7 294 -18 204 265 0 15 chr10 73263378 73263446 -72325842 + MIR SINE MIR 119 185 -77 260 195 91 0 chr10 73263491 73263568 -72325720 + AluJ/FRAM SINE Alu 217 300 -2 344 176 0 14 chr10 73263602 73263676 -72325612 + G-rich Low_complexity Low_complexity 5 77 0 660 207 9 0 chr10 73263716 73263832 -72325456 + FLAM_C SINE Alu 5 121 -12 1990 113 13 60 chr10 73263990 73264308 -72324980 + AluSx SINE Alu 1 303 -9 1426 142 0 14 chr10 73264593 73264811 -72324477 + AluJb SINE Alu 73 287 -25 195 42 0 0 chr10 73264811 73264835 -72324453 + (GGAGA)n Simple_repeat Simple_repeat 5 28 0 1635 106 18 0 chr10 73264936 73265163 -72324125 + AluSg SINE Alu 60 290 -20 1631 167 33 33 chr10 73265174 73265305 -72323983 + AluJo SINE Alu 1 131 -181 2353 105 0 10 chr10 73265305 73265618 -72323670 + AluSq SINE Alu 1 310 -3 1631 167 33 33 chr10 73265618 73265786 -72323502 + AluJo SINE Alu 130 300 -12 2130 133 3 0 chr10 73265800 73266100 -72323188 + AluSq SINE Alu 1 301 -12 258 268 98 12 chr10 73266100 73266182 -72323106 - L2 LINE L2 -1110 2204 2116 4594 70 14 7 chr10 73266517 73266586 -72322702 + LTR10C LTR ERV1 1 68 -523 2522 70 0 0 chr10 73266586 73266887 -72322401 - AluY SINE Alu -10 301 1 4594 70 14 7 chr10 73266887 73267404 -72321884 + LTR10C LTR ERV1 68 591 0 776 145 12 24 chr10 73267511 73267759 -72321529 + (TA)n Simple_repeat Simple_repeat 1 245 0 249 226 0 32 chr10 73267767 73267860 -72321428 - L1MC4 LINE L1 -1339 6703 6614 * 300 272 19 0 chr10 73267780 73267883 -72321405 + L1MC4 LINE L1 6612 6716 -1326 1967 110 3 34 chr10 73267894 73268186 -72321102 - AluSq SINE Alu -30 283 1 2607 52 0 0 chr10 73268384 73268694 -72320594 + AluY SINE Alu 1 310 -1 2092 102 3 13 chr10 73268730 73269033 -72320255 + AluSg SINE Alu 1 300 -10 645 176 16 8 chr10 73269270 73269395 -72319893 + FLAM_C SINE Alu 5 130 -13 2107 133 3 3 chr10 73269403 73269703 -72319585 + AluSx SINE Alu 1 300 -12 2203 107 0 0 chr10 73269706 73269995 -72319293 + AluSg SINE Alu 1 289 -21 1113 132 0 12 chr10 73270148 73270315 -72318973 - AluSg/x SINE Alu -11 299 135 1824 144 3 11 chr10 73270315 73270600 -72318688 - AluSq SINE Alu -29 284 2 2028 135 7 3 chr10 73270608 73270897 -72318391 - AluSg SINE Alu -20 290 1 661 210 0 0 chr10 73270983 73271102 -72318186 + FLAM_C SINE Alu 1 119 -24 216 0 0 0 chr10 73271104 73271128 -72318160 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 2198 103 0 3 chr10 73271128 73271410 -72317878 - AluSq SINE Alu -32 281 1 1958 138 3 17 chr10 73271416 73271713 -72317575 - AluSg SINE Alu -14 296 4 1976 156 0 0 chr10 73271744 73272045 -72317243 + AluSx SINE Alu 1 301 -11 2152 114 0 0 chr10 73272103 73272384 -72316904 + AluSx SINE Alu 1 281 -31 252 163 0 0 chr10 73272413 73272462 -72316826 + AluSp/q SINE Alu 253 301 -2 196 100 20 40 chr10 73273383 73273433 -72315855 + (CAAAAA)n Simple_repeat Simple_repeat 4 52 0 1461 261 75 10 chr10 73273620 73274034 -72315254 + LTR47B LTR ERVL 3 443 0 371 348 11 27 chr10 73274048 73274232 -72315056 + LTR47B-int LTR ERVL 15 195 -5148 2272 99 0 3 chr10 73274391 73274694 -72314594 + AluSq SINE Alu 2 303 -10 2264 108 0 0 chr10 73275371 73275668 -72313620 - AluSx SINE Alu -15 297 1 204 67 0 0 chr10 73275890 73275920 -72313368 + (TTAAA)n Simple_repeat Simple_repeat 3 32 0 1952 133 33 0 chr10 73276032 73276332 -72312956 + AluSg SINE Alu 1 310 0 2025 153 0 7 chr10 73276478 73276785 -72312503 + AluSx SINE Alu 1 305 -7 1678 106 0 0 chr10 73276785 73277003 -72312285 + AluSc SINE Alu 83 300 -9 22 35 0 0 chr10 73277064 73277093 -72312195 + AT_rich Low_complexity Low_complexity 1 29 0 596 233 120 0 chr10 73277100 73277250 -72312038 + MER6B DNA MER2_type 2 169 -41 590 250 107 19 chr10 73277491 73277707 -72311581 + L1MC/D LINE L1 5337 5571 -2237 2247 98 37 0 chr10 73277810 73278107 -72311181 - AluY SINE Alu -3 308 1 21 57 0 0 chr10 73278620 73278655 -72310633 + AT_rich Low_complexity Low_complexity 1 35 0 750 183 0 0 chr10 73278658 73278778 -72310510 - FLAM_C SINE Alu -22 121 2 23 54 0 0 chr10 73279334 73279371 -72309917 + AT_rich Low_complexity Low_complexity 1 37 0 27 29 0 0 chr10 73279781 73279815 -72309473 + AT_rich Low_complexity Low_complexity 1 34 0 413 238 104 26 chr10 73280119 73280273 -72309015 + L1ME LINE L1 4454 4627 -1519 246 62 0 0 chr10 73280273 73280305 -72308983 + (TG)n Simple_repeat Simple_repeat 2 33 0 413 238 104 26 chr10 73280305 73280343 -72308945 + L1ME LINE L1 4627 4661 -1485 342 224 154 51 chr10 73280329 73280485 -72308803 + L1ME LINE L1 4937 5108 -1038 * 1397 216 23 13 chr10 73280509 73280814 -72308474 + AluJb SINE Alu 1 308 -4 311 161 269 11 chr10 73280817 73280910 -72308378 + AluJo/FRAM SINE Alu 185 301 -1 1277 149 126 12 chr10 73280927 73281182 -72308106 + AluSx SINE Alu 29 312 0 214 149 30 45 chr10 73281204 73281302 -72307986 + (TA)n Simple_repeat Simple_repeat 1 96 0 328 269 54 8 chr10 73281313 73281448 -72307840 + L1ME LINE L1 5310 5442 -720 537 151 0 12 chr10 73281489 73281575 -72307713 + AluSg/x SINE Alu 208 292 -20 850 166 0 7 chr10 73282423 73282562 -72306726 - L1PB4 LINE L1 -4 6152 6015 1483 182 0 58 chr10 73282632 73282962 -72306326 - AluJo SINE Alu -1 311 1 38 39 0 0 chr10 73283088 73283140 -72306148 + AT_rich Low_complexity Low_complexity 1 52 0 1064 117 0 0 chr10 73283273 73283410 -72305878 + AluSq/x SINE Alu 1 137 -176 1817 157 33 0 chr10 73283410 73283710 -72305578 + AluSq SINE Alu 1 310 -3 1608 170 35 10 chr10 73283797 73284085 -72305203 + AluJo SINE Alu 1 295 -17 29 78 0 0 chr10 73284168 73284232 -72305056 + AT_rich Low_complexity Low_complexity 1 64 0 2451 55 0 58 chr10 73284234 73284561 -72304727 + AluY SINE Alu 1 308 -3 2111 99 0 52 chr10 73284624 73284948 -72304340 + AluSq SINE Alu 7 313 0 2071 124 0 7 chr10 73284957 73285255 -72304033 + AluSq SINE Alu 18 313 0 29 28 0 0 chr10 73285317 73285353 -72303935 + AT_rich Low_complexity Low_complexity 1 36 0 694 215 81 12 chr10 73285676 73285848 -72303440 + L1ME3A LINE L1 5982 6165 -5 2076 118 31 0 chr10 73285963 73286250 -72303038 + AluSx SINE Alu 1 296 -16 1354 120 11 0 chr10 73286444 73286635 -72302653 - AluSx SINE Alu -119 193 1 768 167 0 0 chr10 73286694 73286808 -72302480 - AluSg/x SINE Alu -10 302 189 791 113 27 3 chr10 73287150 73287368 -72301920 + AluSx SINE Alu 8 302 -8 22 56 0 0 chr10 73287707 73287743 -72301545 + AT_rich Low_complexity Low_complexity 1 36 0 772 220 50 6 chr10 73287936 73288095 -72301193 - AluJb SINE Alu -16 296 131 2464 46 20 7 chr10 73288106 73288412 -72300876 + AluY SINE Alu 1 310 -1 1200 133 4 86 chr10 73288427 73288599 -72300689 - MER31A LTR ERV1 -194 291 141 2300 107 0 0 chr10 73288599 73288897 -72300391 + AluSx SINE Alu 1 298 -14 1200 133 4 86 chr10 73288897 73288957 -72300331 - MER31A LTR ERV1 -344 141 78 944 212 6 6 chr10 73288957 73289122 -72300166 + FAM SINE Alu 1 165 -10 687 143 67 0 chr10 73289284 73289403 -72299885 + AluSg/x SINE Alu 176 302 -8 22 56 0 0 chr10 73289742 73289778 -72299510 + AT_rich Low_complexity Low_complexity 1 36 0 1342 168 44 61 chr10 73289970 73290141 -72299147 - AluJb SINE Alu -16 296 131 2416 70 3 0 chr10 73290141 73290439 -72298849 + AluY SINE Alu 1 299 -12 1342 168 44 61 chr10 73290439 73290564 -72298724 - AluJb SINE Alu -181 131 5 1936 134 10 3 chr10 73290574 73290872 -72298416 - AluSx SINE Alu -12 300 1 242 268 0 0 chr10 73290911 73290967 -72298321 - L2 LINE L2 0 3313 3258 1925 90 8 0 chr10 73291086 73291331 -72297957 + AluY SINE Alu 33 279 -32 3088 143 2 4 chr10 73291332 73291788 -72297500 - MER1A DNA MER1_type -35 494 40 198 0 0 0 chr10 73291940 73291962 -72297326 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 300 173 58 0 chr10 73292072 73292124 -72297164 + MLT1F1 LTR MaLR 189 243 -324 619 129 0 143 chr10 73292413 73292553 -72296735 - FAM SINE Alu -2 47 1 1015 166 266 55 chr10 73292572 73292861 -72296427 + MLT1F1 LTR MaLR 164 513 -54 2211 95 0 3 chr10 73292978 73293282 -72296006 - AluSx SINE Alu -9 303 1 319 201 49 118 chr10 73293342 73293486 -72295802 + L2 LINE L2 2927 3060 -253 2339 93 7 0 chr10 73293490 73293791 -72295497 - AluSq SINE Alu -10 303 1 353 318 124 24 chr10 73293943 73294321 -72294967 + L1ME4a LINE L1 4428 4843 -1303 1198 174 191 0 chr10 73294667 73294933 -72294355 + AluJb SINE Alu 1 312 0 1990 36 72 20 chr10 73296155 73296405 -72292883 - AluY SINE Alu -20 291 29 359 269 120 43 chr10 73296411 73296619 -72292669 + L1ME4a LINE L1 5625 5848 -273 2030 119 41 0 chr10 73296960 73297255 -72292033 - AluSq SINE Alu -6 307 1 1046 209 4 36 chr10 73297320 73297545 -72291743 + MER20 DNA MER1_type 1 218 -1 2491 54 7 3 chr10 73297992 73298290 -72290998 - AluY SINE Alu -12 299 1 413 280 188 32 chr10 73298331 73298549 -72290739 + MIR SINE MIR 10 261 -1 810 180 0 0 chr10 73298708 73298836 -72290452 + FLAM_C SINE Alu 6 133 -10 2063 158 0 0 chr10 73299990 73300294 -72288994 - AluSx SINE Alu -8 304 1 1602 198 0 13 chr10 73303110 73303408 -72285880 + AluJb SINE Alu 1 294 -18 2303 114 0 0 chr10 73303413 73303720 -72285568 + AluSg SINE Alu 1 307 -3 311 242 0 0 chr10 73303874 73303940 -72285348 + AluSc SINE Alu 220 285 -14 1989 112 26 26 chr10 73304009 73304321 -72284967 - AluSx SINE Alu 0 312 1 339 224 53 0 chr10 73304346 73304422 -72284866 - L1ME3A LINE L1 -8 6162 6083 1927 167 0 19 chr10 73304566 73304884 -72284404 - AluJb SINE Alu 0 312 1 658 174 10 117 chr10 73304893 73304955 -72284333 - L1MB7 LINE L1 -17 6167 6100 2144 136 0 0 chr10 73304955 73305256 -72284032 + AluSq SINE Alu 1 301 -12 658 174 10 117 chr10 73305256 73305389 -72283899 - L1MB7 LINE L1 -84 6100 5993 1426 202 3 24 chr10 73305407 73305694 -72283594 - AluJo SINE Alu -11 301 21 400 173 0 0 chr10 73305795 73305876 -72283412 + L1MA8 LINE L1 6209 6289 -2 793 250 0 0 chr10 73305897 73306057 -72283231 + FRAM SINE Alu 1 160 -16 1879 100 4 19 chr10 73306059 73306319 -72282969 + AluSc SINE Alu 1 256 -53 302 91 18 0 chr10 73306333 73306388 -72282900 + (TAAA)n Simple_repeat Simple_repeat 2 57 0 710 180 127 40 chr10 73306388 73306538 -72282750 + 7SLRNA srpRNA srpRNA 135 297 -23 896 112 0 0 chr10 73306538 73306663 -72282625 + AluSp/q SINE Alu 182 306 -7 784 215 107 10 chr10 73306714 73306919 -72282369 - MER58B DNA MER1_type 0 341 117 2413 68 13 3 chr10 73307011 73307318 -72281970 + AluY SINE Alu 1 310 -1 1725 127 0 0 chr10 73307340 73307592 -72281696 + AluSg SINE Alu 44 295 -15 2023 128 3 0 chr10 73307636 73307926 -72281362 + AluSx SINE Alu 5 295 -17 1376 149 76 43 chr10 73308093 73308433 -72280855 + AluJb SINE Alu 1 349 0 1565 127 0 0 chr10 73308434 73308654 -72280634 - AluSg/x SINE Alu -27 285 66 357 138 17 0 chr10 73308654 73308712 -72280576 + AluSp/q SINE Alu 244 302 -1 414 0 0 0 chr10 73309047 73309093 -72280195 + (CA)n Simple_repeat Simple_repeat 1 46 0 484 195 158 68 chr10 73309249 73309439 -72279849 - MER106A DNA MER1_type 0 236 30 1184 174 5 0 chr10 73309780 73309976 -72279312 + AluSx SINE Alu 1 197 -115 1294 129 26 0 chr10 73309982 73310176 -72279112 - AluSg/x SINE Alu -21 289 91 301 114 0 23 chr10 73310176 73310220 -72279068 - Alu SINE Alu -258 44 2 697 131 8 33 chr10 73310220 73310342 -72278946 + AluSx SINE Alu 188 306 -6 1790 143 31 0 chr10 73310570 73310857 -72278431 + AluSx SINE Alu 1 296 -16 27 0 0 0 chr10 73311879 73311906 -72277382 + AT_rich Low_complexity Low_complexity 1 27 0 2185 95 0 35 chr10 73312138 73312455 -72276833 - AluSq SINE Alu -6 307 2 1097 101 6 19 chr10 73313308 73313485 -72275803 - AluY SINE Alu 0 311 137 1052 168 55 21 chr10 73313817 73314055 -72275233 - AluY SINE Alu -30 281 36 1341 95 0 0 chr10 73314055 73314224 -72275064 - AluY SINE Alu -142 169 1 707 156 49 16 chr10 73314623 73314745 -72274543 + FLAM_C SINE Alu 5 130 -13 23 0 0 0 chr10 73314745 73314768 -72274520 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr10 73315259 73315289 -72273999 + AT_rich Low_complexity Low_complexity 1 30 0 1246 182 9 9 chr10 73315487 73315707 -72273581 + AluJo SINE Alu 3 222 -90 25 31 0 0 chr10 73315915 73315947 -72273341 + AT_rich Low_complexity Low_complexity 1 32 0 474 138 0 0 chr10 73315988 73316053 -72273235 + AluS SINE Alu 6 70 -242 24 53 0 0 chr10 73316053 73316091 -72273197 + AT_rich Low_complexity Low_complexity 1 38 0 322 271 8 8 chr10 73316288 73316406 -72272882 + AluSc SINE Alu 182 299 0 27 49 0 0 chr10 73317067 73317108 -72272180 + AT_rich Low_complexity Low_complexity 1 41 0 262 216 169 47 chr10 73317217 73317365 -72271923 + L1MDa LINE L1 1876 2041 -4499 26 0 0 0 chr10 73317437 73317463 -72271825 + AT_rich Low_complexity Low_complexity 1 26 0 327 214 56 48 chr10 73317612 73317738 -72271550 + MER112 DNA MER1_type 7 133 -127 1792 118 4 12 chr10 73317847 73318102 -72271186 - AluSq SINE Alu 0 313 61 339 102 0 0 chr10 73318105 73318154 -72271134 + AluJ/F(R)AM SINE Alu 158 206 -105 2430 133 18 0 chr10 73319081 73319464 -72269824 + HSMAR2 DNA Mariner 3 392 -910 593 219 123 0 chr10 73319464 73319619 -72269669 - FAM SINE Alu 0 175 2 2073 123 7 3 chr10 73319751 73320051 -72269237 - AluSq SINE Alu -12 301 1 261 0 0 0 chr10 73320054 73320083 -72269205 + (TG)n Simple_repeat Simple_repeat 2 30 0 744 86 0 0 chr10 73320092 73320197 -72269091 + (TA)n Simple_repeat Simple_repeat 2 106 0 225 0 0 0 chr10 73320207 73320232 -72269056 + (CA)n Simple_repeat Simple_repeat 1 25 0 2129 101 39 0 chr10 73320517 73320803 -72268485 - AluY SINE Alu -14 297 1 946 111 0 30 chr10 73320809 73320944 -72268344 - AluSq/x SINE Alu -181 131 1 4775 138 20 26 chr10 73320944 73321778 -72267510 + HSMAR2 DNA Mariner 383 1252 -50 748 184 104 40 chr10 73321808 73321885 -72267403 - AluJo SINE Alu -97 215 144 1802 75 119 8 chr10 73321885 73322138 -72267150 - AluSp SINE Alu -21 292 12 748 184 104 40 chr10 73322138 73322155 -72267133 - AluJo SINE Alu -168 144 130 195 69 0 0 chr10 73322155 73322184 -72267104 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 748 184 104 40 chr10 73322184 73322289 -72266999 - AluJo SINE Alu -182 130 2 378 335 11 34 chr10 73322298 73322474 -72266814 - L2 LINE L2 -571 2743 2572 336 311 93 6 chr10 73322506 73322667 -72266621 - L2 LINE L2 -928 2386 2212 1868 127 0 0 chr10 73322697 73322949 -72266339 + AluSq SINE Alu 1 252 -61 2102 133 0 22 chr10 73323123 73323440 -72265848 + AluSx SINE Alu 1 310 -2 2185 124 0 0 chr10 73323904 73324203 -72265085 - AluSx SINE Alu -13 299 1 1479 200 0 24 chr10 73324576 73324871 -72264417 - AluJb SINE Alu -18 294 7 671 200 43 14 chr10 73325736 73325876 -72263412 - FRAM SINE Alu -11 165 22 518 96 14 0 chr10 73325930 73326003 -72263285 + AluS SINE Alu 19 92 -220 406 116 0 187 chr10 73326116 73326191 -72263097 - MER34C LTR ERV1 -484 101 5 456 159 45 0 chr10 73326193 73326281 -72263007 + L1M4 LINE L1 5699 5790 -394 279 235 82 0 chr10 73326305 73326390 -72262898 + U13 snRNA snRNA 1 92 -12 2318 86 7 3 chr10 73326390 73326691 -72262597 + AluSp SINE Alu 2 303 -10 21 36 0 0 chr10 73326696 73326724 -72262564 + AT_rich Low_complexity Low_complexity 1 28 0 2492 80 0 6 chr10 73326726 73327037 -72262251 + AluSg SINE Alu 1 309 -1 2393 109 18 149 chr10 73327038 73327238 -72262050 - MER31A LTR ERV1 -5 480 256 1549 178 3 47 chr10 73327238 73327536 -72261752 + AluJo SINE Alu 14 298 -14 2764 32 0 6 chr10 73327537 73327850 -72261438 + AluY SINE Alu 1 311 0 2393 109 18 149 chr10 73327850 73328039 -72261249 - MER31A LTR ERV1 -229 256 44 2312 105 0 0 chr10 73328039 73328335 -72260953 + AluSx SINE Alu 1 296 -16 2393 109 18 149 chr10 73328335 73328395 -72260893 - MER31A LTR ERV1 -441 44 109 884 212 6 6 chr10 73328395 73328560 -72260728 + FAM SINE Alu 1 165 -10 2393 109 18 149 chr10 73328560 73328658 -72260630 - MER31A LTR ERV1 -375 110 1 2072 97 4 0 chr10 73328672 73328939 -72260349 - AluSx SINE Alu -6 306 39 311 192 14 0 chr10 73328947 73329020 -72260268 + CT-rich Low_complexity Low_complexity 1 74 0 1344 162 0 37 chr10 73329029 73329270 -72260018 - AluJb SINE Alu 0 312 81 2794 197 51 47 chr10 73329275 73329844 -72259444 - MER31A-int LTR ERV1 -53 4883 4309 2420 84 3 0 chr10 73329844 73330142 -72259146 - AluSq SINE Alu -14 299 1 2794 197 51 47 chr10 73330142 73330319 -72258969 - MER31A-int LTR ERV1 -627 4309 4134 1983 141 13 10 chr10 73330333 73330639 -72258649 - AluSx SINE Alu -5 307 1 437 61 0 30 chr10 73330862 73330928 -72258360 + (TCCCC)n Simple_repeat Simple_repeat 1 64 0 1118 119 6 6 chr10 73330929 73331088 -72258200 - AluSg/x SINE Alu -24 288 130 721 159 23 38 chr10 73331170 73331302 -72257986 - AluJo SINE Alu -176 136 7 1588 194 61 54 chr10 73331376 73331404 -72257884 - MER31A-int LTR ERV1 -781 5817 5791 2019 63 3 121 chr10 73331404 73331758 -72257530 + AluY SINE Alu 1 311 0 1588 194 61 54 chr10 73331758 73332272 -72257016 - MER31A-int LTR ERV1 -807 5791 3498 2484 74 0 0 chr10 73332272 73332622 -72256666 + AluY SINE Alu 1 350 0 1312 180 75 58 chr10 73332625 73332925 -72256363 + L1MB7 LINE L1 5798 6106 -78 2180 100 10 0 chr10 73332925 73333214 -72256074 - AluSq SINE Alu -21 292 1 1312 180 75 58 chr10 73333214 73333275 -72256013 + L1MB7 LINE L1 6106 6165 -19 3767 72 45 34 chr10 73333307 73333625 -72255663 + L1PA5 LINE L1 5552 5882 -272 2397 58 10 3 chr10 73333625 73333920 -72255368 - AluY SINE Alu -13 298 2 3767 72 45 34 chr10 73333920 73334197 -72255091 + L1PA5 LINE L1 5882 6154 0 2172 118 3 3 chr10 73334975 73335280 -72254008 + AluSg SINE Alu 1 305 -5 867 121 0 0 chr10 73335285 73335401 -72253887 + AluSq/x SINE Alu 20 135 -178 2389 78 7 3 chr10 73335401 73335530 -72253758 + AluY SINE Alu 2 129 -182 2284 50 0 75 chr10 73335530 73335888 -72253400 + AluY SINE Alu 1 311 0 2389 78 7 3 chr10 73335888 73336067 -72253221 + AluY SINE Alu 129 311 0 314 200 133 33 chr10 73336114 73336234 -72253054 + L1ME3A LINE L1 6039 6170 0 301 204 182 0 chr10 73336279 73336367 -72252921 + MER112 DNA MER1_type 153 256 -4 1692 146 93 0 chr10 73336370 73336638 -72252650 + AluSx SINE Alu 1 293 -19 1339 114 0 0 chr10 73336639 73336815 -72252473 + AluSg/x SINE Alu 132 307 -3 2049 130 17 0 chr10 73336851 73337150 -72252138 + AluSx SINE Alu 3 306 -6 251 314 172 0 chr10 73337259 73337428 -72251860 + MIR SINE MIR 62 259 -3 21 0 0 0 chr10 73338681 73338702 -72250586 + AT_rich Low_complexity Low_complexity 1 21 0 2359 90 0 3 chr10 73339174 73339475 -72249813 - AluSg1 SINE Alu -9 300 1 29 28 0 0 chr10 73339601 73339637 -72249651 + AT_rich Low_complexity Low_complexity 1 36 0 2416 100 3 0 chr10 73341344 73341655 -72247633 + AluSx SINE Alu 1 312 0 21 0 0 0 chr10 73341911 73341932 -72247356 + AT_rich Low_complexity Low_complexity 1 21 0 802 160 15 0 chr10 73343478 73343609 -72245679 + FLAM_C SINE Alu 1 133 0 2455 87 0 0 chr10 73343891 73344191 -72245097 + AluY SINE Alu 1 300 -11 2201 119 7 0 chr10 73344201 73344496 -72244792 + AluSp SINE Alu 1 297 -16 1746 159 10 10 chr10 73344504 73344794 -72244494 + AluSx SINE Alu 1 290 -22 668 188 0 8 chr10 73344796 73344913 -72244375 - AluJo/FLAM SINE Alu -186 116 1 853 204 61 6 chr10 73344946 73345127 -72244161 + AluJb SINE Alu 119 309 -3 2082 95 24 27 chr10 73345181 73345476 -72243812 + AluSp SINE Alu 2 295 -18 849 96 9 0 chr10 73345537 73345652 -72243636 + AluSp SINE Alu 32 147 -166 572 143 0 0 chr10 73345652 73345743 -72243545 + AluSg/x SINE Alu 212 302 -8 27 29 0 0 chr10 73345973 73346007 -72243281 + AT_rich Low_complexity Low_complexity 1 34 0 1844 171 10 3 chr10 73346158 73346462 -72242826 + AluJb SINE Alu 1 306 -6 2233 102 0 0 chr10 73346482 73346775 -72242513 - AluY SINE Alu -18 293 1 2354 63 3 3 chr10 73347040 73347326 -72241962 + AluY SINE Alu 1 286 -25 2067 124 6 25 chr10 73347595 73347909 -72241379 + AluSg SINE Alu 1 308 -2 2182 113 10 7 chr10 73347992 73348294 -72240994 - AluSx SINE Alu -9 303 1 2306 104 3 0 chr10 73348304 73348613 -72240675 - AluSp SINE Alu -3 310 1 1716 182 3 7 chr10 73348645 73348947 -72240341 + AluJb SINE Alu 1 301 -11 2118 112 0 30 chr10 73348949 73349252 -72240036 + AluSx SINE Alu 1 294 -18 658 214 0 30 chr10 73349262 73349393 -72239895 + FLAM_A SINE Alu 2 128 -5 32 44 0 29 chr10 73349481 73349524 -72239764 + AT_rich Low_complexity Low_complexity 1 43 -23 1471 211 18 0 chr10 73349524 73349652 -72239636 + AluJb SINE Alu 1 125 -187 2003 131 7 10 chr10 73349652 73349957 -72239331 + AluSg SINE Alu 1 304 -6 1471 211 18 0 chr10 73349957 73350113 -72239175 + AluJb SINE Alu 125 290 -22 32 44 0 29 chr10 73350113 73350137 -72239151 + AT_rich Low_complexity Low_complexity 43 66 0 890 117 0 22 chr10 73350137 73350274 -72239014 + AluSq/x SINE Alu 1 134 -179 2238 89 26 3 chr10 73350279 73350583 -72238705 + AluSp SINE Alu 1 311 -2 2168 108 10 3 chr10 73350667 73350972 -72238316 + AluSp SINE Alu 1 307 -6 312 70 0 0 chr10 73351630 73351673 -72237615 + (TA)n Simple_repeat Simple_repeat 2 44 0 361 256 70 16 chr10 73351735 73351864 -72237424 + L1MC/D LINE L1 5309 5444 -2364 1094 83 0 0 chr10 73352089 73352222 -72237066 + AluSq/x SINE Alu 1 133 -180 317 202 269 10 chr10 73352301 73352405 -72236883 + MLT1H LTR MaLR 399 529 -20 1180 123 0 24 chr10 73352414 73352584 -72236704 - AluSg SINE Alu -144 166 1 415 263 33 100 chr10 73352586 73352681 -72236607 + L1MC/D LINE L1 5548 5648 -2160 798 139 0 44 chr10 73352681 73352818 -72236470 - FLAM_C SINE Alu 0 133 3 415 263 33 100 chr10 73352818 73352918 -72236370 + L1MC/D LINE L1 5648 5723 -2085 1882 126 17 23 chr10 73352918 73353219 -72236069 + AluSx SINE Alu 12 310 -2 415 263 33 100 chr10 73353219 73353292 -72235996 + L1MC/D LINE L1 5723 5799 -2009 1272 162 0 30 chr10 73353365 73353541 -72235747 - AluSg/x SINE Alu 0 312 132 213 39 0 0 chr10 73353541 73353567 -72235721 + (TTTTA)n Simple_repeat Simple_repeat 2 27 0 2016 130 3 0 chr10 73353567 73353851 -72235437 - AluSq SINE Alu -28 285 1 1272 162 0 30 chr10 73353851 73353908 -72235380 - AluSg/x SINE Alu -178 134 85 476 200 31 50 chr10 73354076 73354236 -72235052 + L1M4 LINE L1 3064 3220 -2926 689 162 0 0 chr10 73354238 73354343 -72234945 + FLAM_C SINE Alu 3 107 -36 325 264 52 36 chr10 73354347 73354540 -72234748 - L1 LINE L1 -2739 3407 3212 2503 63 0 19 chr10 73354543 73354894 -72234394 - AluY SINE Alu 0 345 1 1440 194 37 14 chr10 73354909 73355079 -72234209 - AluJb SINE Alu 0 302 121 2171 90 0 59 chr10 73355079 73355264 -72234024 - AluSp SINE Alu -9 304 144 2618 46 3 3 chr10 73355264 73355567 -72233721 - AluY SINE Alu -8 303 1 2171 90 0 59 chr10 73355567 73355703 -72233585 - AluSp SINE Alu -169 144 2 1440 194 37 14 chr10 73355703 73355826 -72233462 - AluJb SINE Alu -181 121 2 1435 57 21 42 chr10 73355850 73356042 -72233246 - AluSp SINE Alu -8 305 118 2052 103 7 27 chr10 73356072 73356364 -72232924 + AluSg SINE Alu 11 296 -14 33 56 0 14 chr10 73356364 73356375 -72232913 + AT_rich Low_complexity Low_complexity 1 11 -60 1839 156 0 7 chr10 73356375 73356664 -72232624 + AluSq SINE Alu 1 287 -26 33 56 0 14 chr10 73356664 73356724 -72232564 + AT_rich Low_complexity Low_complexity 11 71 0 2160 64 89 4 chr10 73360716 73360996 -72228292 - AluY SINE Alu -7 304 1 1702 92 4 13 chr10 73361528 73361755 -72227533 - AluY SINE Alu -15 296 72 1155 89 7 0 chr10 73361755 73361901 -72227387 - AluY SINE Alu -164 147 1 27 49 0 0 chr10 73361981 73362022 -72227266 + AT_rich Low_complexity Low_complexity 1 41 0 446 239 23 29 chr10 73362496 73362584 -72226704 + L1MC5 LINE L1 6739 6826 -959 2621 49 0 13 chr10 73362584 73362891 -72226397 + AluY SINE Alu 1 303 -8 446 239 23 29 chr10 73362891 73362936 -72226352 + L1MC5 LINE L1 6826 6870 -915 1926 137 45 0 chr10 73362936 73363228 -72226060 + AluSx SINE Alu 1 305 -7 446 239 23 29 chr10 73363228 73363247 -72226041 + L1MC5 LINE L1 6870 6921 -864 222 277 0 31 chr10 73363268 73363333 -72225955 + (CATATA)n Simple_repeat Simple_repeat 3 65 0 2163 121 3 0 chr10 73363865 73364155 -72225133 - AluSq SINE Alu -22 291 1 559 256 83 20 chr10 73364238 73364492 -72224796 + L1MC4a LINE L1 5661 5930 -1878 2232 121 0 0 chr10 73364608 73364906 -72224382 - AluSx SINE Alu -14 298 1 603 193 164 14 chr10 73365628 73365768 -72223520 + FRAM SINE Alu 4 164 -2 1304 180 39 39 chr10 73365785 73366069 -72223219 + L1MB8 LINE L1 5837 6120 -58 1143 145 62 76 chr10 73366069 73366187 -72223101 - Tigger1 DNA MER2_type 0 2418 2300 1834 181 0 3 chr10 73366187 73366485 -72222803 + AluJb SINE Alu 1 297 -15 2564 60 0 0 chr10 73366492 73366793 -72222495 + AluY SINE Alu 1 301 -10 1143 145 62 76 chr10 73366793 73366942 -72222346 - Tigger1 DNA MER2_type -124 2294 2147 922 210 10 15 chr10 73366942 73367137 -72222151 + AluJo SINE Alu 86 279 -33 1791 122 37 90 chr10 73367137 73367197 -72222091 - Tigger1 DNA MER2_type -411 2007 1945 2023 131 10 0 chr10 73367197 73367488 -72221800 + AluSx SINE Alu 2 295 -17 1791 122 37 90 chr10 73367488 73367651 -72221637 - Tigger1 DNA MER2_type -473 1945 1809 2399 51 10 17 chr10 73367651 73367945 -72221343 + AluY SINE Alu 1 292 -19 1791 122 37 90 chr10 73367945 73368096 -72221192 - Tigger1 DNA MER2_type -609 1809 1652 558 121 66 0 chr10 73368097 73368188 -72221100 - AluSg SINE Alu -186 124 28 2110 86 60 0 chr10 73368236 73368538 -72220750 + AluY SINE Alu 1 318 0 1058 155 6 6 chr10 73368539 73368707 -72220581 + AluJb SINE Alu 134 301 -11 5942 133 88 139 chr10 73368711 73369274 -72220014 - Tigger1 DNA MER2_type -969 1449 859 710 120 0 96 chr10 73369274 73369399 -72219889 - FRAM SINE Alu -19 157 45 5942 133 88 139 chr10 73369399 73369826 -72219462 - Tigger1 DNA MER2_type -1559 859 412 1430 181 29 29 chr10 73369826 73370135 -72219153 - AluJb SINE Alu -3 309 1 5942 133 88 139 chr10 73370135 73370154 -72219134 - Tigger1 DNA MER2_type -2006 412 394 2209 103 10 0 chr10 73370154 73370445 -72218843 - AluSx SINE Alu -15 297 4 5942 133 88 139 chr10 73370445 73370457 -72218831 - Tigger1 DNA MER2_type -2024 394 383 2148 133 0 3 chr10 73370457 73370758 -72218530 - AluSx SINE Alu -11 301 2 5942 133 88 139 chr10 73370758 73371135 -72218153 - Tigger1 DNA MER2_type -2035 383 2 235 102 0 41 chr10 73371148 73371197 -72218091 + L1MB7 LINE L1 6138 6184 0 1493 209 28 0 chr10 73371216 73371503 -72217785 + AluJo SINE Alu 1 295 -17 2258 108 0 3 chr10 73372150 73372446 -72216842 + AluSx SINE Alu 1 295 -17 2090 100 31 7 chr10 73372565 73372856 -72216432 + AluSg SINE Alu 1 298 -12 443 296 37 69 chr10 73372977 73373470 -72215818 - L2 LINE L2 -10 3303 2780 2222 114 10 0 chr10 73373473 73373770 -72215518 - AluSg SINE Alu -10 300 1 1438 160 4 4 chr10 73373770 73374001 -72215287 - AluJb SINE Alu -23 289 59 2179 117 0 10 chr10 73374012 73374310 -72214978 - AluSx SINE Alu -17 295 1 1432 216 40 83 chr10 73374317 73374871 -72214417 - L2 LINE L2 -536 2778 2202 1465 163 24 8 chr10 73374871 73375122 -72214166 + AluJo SINE Alu 13 614 0 2248 104 0 7 chr10 73375129 73375427 -72213861 - AluSq SINE Alu -17 296 1 1554 163 20 30 chr10 73375427 73375469 -72213819 + AluJo SINE Alu 20 310 -2 1432 216 40 83 chr10 73375474 73375575 -72213713 - L2 LINE L2 -1112 2202 2135 2248 103 0 31 chr10 73375575 73375709 -72213579 + AluSc SINE Alu 1 138 -171 2295 114 7 0 chr10 73375709 73376017 -72213271 + AluSx SINE Alu 1 310 -2 2248 103 0 31 chr10 73376017 73376201 -72213087 + AluSc SINE Alu 138 309 0 21 0 0 0 chr10 73376793 73376814 -72212474 + AT_rich Low_complexity Low_complexity 1 21 0 1988 121 28 3 chr10 73377054 73377343 -72211945 - AluSx SINE Alu -16 296 1 724 216 0 0 chr10 73377382 73377507 -72211781 + AluJo SINE Alu 12 136 -176 884 121 40 50 chr10 73377507 73377706 -72211582 + AluSp SINE Alu 1 197 -116 622 140 0 40 chr10 73377808 73377908 -72211380 + AluSg/x SINE Alu 205 300 -12 1388 170 0 0 chr10 73377974 73378197 -72211091 - AluY SINE Alu -12 299 77 268 338 4 13 chr10 73378329 73378485 -72210803 + CT-rich Low_complexity Low_complexity 4 235 0 2475 58 0 3 chr10 73378685 73378979 -72210309 - AluY SINE Alu -18 293 1 2094 131 0 0 chr10 73379011 73379308 -72209980 - AluSx SINE Alu -9 303 7 564 301 63 68 chr10 73379348 73379747 -72209541 - L2 LINE L2 0 3313 2917 2382 89 0 0 chr10 73379812 73380115 -72209173 - AluY SINE Alu -8 303 1 2297 95 3 0 chr10 73380140 73380436 -72208852 - AluSp SINE Alu -16 297 1 1839 150 11 7 chr10 73380501 73380787 -72208501 + AluSg SINE Alu 1 287 -23 538 137 10 59 chr10 73380953 73381055 -72208233 - FLAM_C SINE Alu -15 128 32 2104 125 0 3 chr10 73381149 73381446 -72207842 - AluSx SINE Alu -16 296 1 1581 159 96 0 chr10 73381955 73382225 -72207063 + AluSx SINE Alu 1 296 -16 1620 143 96 7 chr10 73382227 73382499 -72206789 + AluSq SINE Alu 1 296 -17 682 246 32 28 chr10 73382664 73382916 -72206372 + L1MC5 LINE L1 7238 7490 -471 2197 99 10 0 chr10 73382949 73383242 -72206046 + AluSp SINE Alu 1 296 -17 2205 114 3 3 chr10 73383274 73383615 -72205673 + AluSq SINE Alu 4 313 0 279 217 50 0 chr10 73383621 73383681 -72205607 + L1MC5 LINE L1 7510 7572 -389 1001 173 66 15 chr10 73385221 73385418 -72203870 - AluJo SINE Alu -13 299 93 1501 243 94 13 chr10 73385621 73386016 -72203272 + L1MC4 LINE L1 6579 7005 -1037 2177 97 7 0 chr10 73386029 73386317 -72202971 + AluSq SINE Alu 6 295 -18 2123 102 0 33 chr10 73386320 73386662 -72202626 + AluSc SINE Alu 1 309 0 624 212 45 86 chr10 73386673 73386965 -72202323 - L1MC4 LINE L1 -209 7833 7554 34 0 0 0 chr10 73386996 73387030 -72202258 + AT_rich Low_complexity Low_complexity 1 34 0 349 331 27 0 chr10 73387030 73387178 -72202110 - L1MC4 LINE L1 -508 7534 7383 2443 74 0 3 chr10 73387412 73387724 -72201564 - AluY SINE Alu 0 311 1 517 189 16 55 chr10 73387732 73387859 -72201429 + L1ME1 LINE L1 6040 6161 -5 2217 115 3 0 chr10 73387870 73388166 -72201122 + AluSp SINE Alu 1 297 -16 2307 76 3 3 chr10 73388167 73388458 -72200830 + AluSg SINE Alu 1 291 -19 27 0 0 0 chr10 73388458 73388485 -72200803 + AT_rich Low_complexity Low_complexity 1 27 0 2209 118 13 0 chr10 73388878 73389184 -72200104 - AluSg SINE Alu 0 310 1 272 295 48 72 chr10 73389199 73389365 -72199923 + L1ME LINE L1 5500 5661 -460 836 171 75 0 chr10 73389453 73389599 -72199689 + FRAM SINE Alu 1 151 -25 1334 214 12 0 chr10 73389639 73389887 -72199401 + AluJo SINE Alu 1 251 -61 24 53 0 0 chr10 73389936 73389974 -72199314 + AT_rich Low_complexity Low_complexity 1 38 0 1418 185 13 61 chr10 73390012 73390325 -72198963 - AluJb SINE Alu -14 298 1 1688 203 0 3 chr10 73390348 73390639 -72198649 - AluJo SINE Alu -22 290 1 1983 117 39 0 chr10 73390799 73391081 -72198207 + AluSx SINE Alu 1 293 -19 230 143 0 0 chr10 73391096 73391138 -72198150 + LTR66 LTR ERVL 398 439 -171 303 234 0 0 chr10 73391140 73391217 -72198071 + (TA)n Simple_repeat Simple_repeat 2 78 0 378 0 0 0 chr10 73391225 73391267 -72198021 + (CA)n Simple_repeat Simple_repeat 2 43 0 559 177 0 10 chr10 73391267 73391363 -72197925 - AluJ/FLAM SINE Alu -216 96 2 1755 181 7 0 chr10 73391418 73391705 -72197583 + AluSx SINE Alu 1 289 -23 1319 83 0 6 chr10 73391730 73391898 -72197390 + AluY SINE Alu 1 167 -144 22 52 0 35 chr10 73392026 73392055 -72197233 + AT_rich Low_complexity Low_complexity 1 29 -27 2084 117 0 3 chr10 73392055 73392346 -72196942 + AluSx SINE Alu 1 290 -22 22 52 0 35 chr10 73392346 73392374 -72196914 + AT_rich Low_complexity Low_complexity 29 56 0 28 0 0 0 chr10 73392518 73392546 -72196742 + AT_rich Low_complexity Low_complexity 1 28 0 418 59 0 0 chr10 73395202 73395253 -72194035 - Alu SINE Alu -261 52 2 581 87 0 35 chr10 73396785 73396900 -72192388 + (TCTA)n Simple_repeat Simple_repeat 1 111 0 1324 196 29 29 chr10 73396901 73397182 -72192106 - AluJo SINE Alu -31 281 1 2549 58 0 7 chr10 73397553 73397863 -72191425 + AluY SINE Alu 1 308 -3 23 33 0 0 chr10 73397879 73397909 -72191379 + AT_rich Low_complexity Low_complexity 1 30 0 545 90 0 36 chr10 73398226 73398337 -72190951 + (TCTA)n Simple_repeat Simple_repeat 1 107 0 1339 200 29 25 chr10 73398338 73398618 -72190670 - AluJo SINE Alu -31 281 1 2329 107 3 0 chr10 73398872 73399182 -72190106 + AluSq SINE Alu 1 311 -2 223 281 149 35 chr10 73399537 73399651 -72189637 - MIR SINE MIR -7 255 129 2097 125 0 28 chr10 73399674 73399993 -72189295 + AluSx SINE Alu 1 310 -2 238 264 14 14 chr10 73400035 73400107 -72189181 + (TA)n Simple_repeat Simple_repeat 2 73 0 626 122 16 65 chr10 73400779 73400902 -72188386 - L1MB3 LINE L1 -2 6181 6065 21 0 0 0 chr10 73401180 73401201 -72188087 + AT_rich Low_complexity Low_complexity 1 21 0 1298 196 143 8 chr10 73401212 73401478 -72187810 + AluJb SINE Alu 1 302 0 1512 118 0 5 chr10 73401485 73401706 -72187582 + AluJb SINE Alu 86 305 -7 1191 127 9 8 chr10 73401772 73401993 -72187295 - AluSq SINE Alu -14 299 1 2006 114 0 0 chr10 73402035 73402308 -72186980 + AluSx SINE Alu 1 273 -39 26 64 0 0 chr10 73403031 73403078 -72186210 + AT_rich Low_complexity Low_complexity 1 47 0 778 60 0 20 chr10 73403189 73403289 -72185999 + L1PA4 LINE L1 6050 6147 -8 2046 123 30 0 chr10 73403311 73403611 -72185677 + AluSx SINE Alu 1 309 -3 1360 112 170 98 chr10 73403640 73403916 -72185372 + AluSx SINE Alu 9 304 -8 2250 112 0 0 chr10 73403918 73404221 -72185067 + AluSg SINE Alu 1 303 -7 549 234 86 8 chr10 73404253 73404381 -72184907 + AluJb SINE Alu 2 139 -173 2335 90 0 10 chr10 73404423 73404723 -72184565 + AluSq SINE Alu 2 298 -15 1024 198 70 112 chr10 73404723 73404883 -72184405 + AluJo SINE Alu 2 167 -135 2162 100 7 7 chr10 73404883 73405172 -72184116 + AluSq SINE Alu 1 289 -24 194 0 0 37 chr10 73405172 73405199 -72184089 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 1024 198 70 112 chr10 73405199 73405351 -72183937 + AluJo SINE Alu 165 302 0 662 229 0 23 chr10 73405714 73405845 -72183443 - FLAM_C SINE Alu -4 129 2 2115 114 6 41 chr10 73406004 73406140 -72183148 + AluSx SINE Alu 1 140 -172 1997 139 0 4 chr10 73406140 73406471 -72182817 + AluSg1 SINE Alu 1 330 0 2115 114 6 41 chr10 73406471 73406648 -72182640 + AluSx SINE Alu 140 304 -8 1799 121 110 7 chr10 73406723 73407004 -72182284 + AluSg SINE Alu 1 310 0 1496 129 5 5 chr10 73407033 73407257 -72182031 + AluSg/x SINE Alu 77 300 -10 1708 137 4 26 chr10 73407270 73407541 -72181747 + AluSx SINE Alu 1 265 -47 347 263 90 15 chr10 73408500 73408633 -72180655 - L1MC4a LINE L1 -1883 5925 5783 477 323 95 0 chr10 73408637 73408795 -72180493 + MER58C DNA MER1_type 1 173 -42 2012 125 0 14 chr10 73408970 73409304 -72179984 + AluSx SINE Alu 1 330 0 816 197 8 0 chr10 73409666 73409798 -72179490 - AluJo SINE Alu -178 134 2 253 93 0 111 chr10 73410713 73410739 -72178549 + L1P4 LINE L1 5802 5821 -342 2125 117 7 3 chr10 73410739 73411030 -72178258 + AluSq SINE Alu 1 292 -21 253 93 0 111 chr10 73411030 73411057 -72178231 + L1P4 LINE L1 5821 5849 -314 1148 133 0 0 chr10 73411260 73411418 -72177870 - AluSx SINE Alu -149 163 6 34 24 0 0 chr10 73411555 73411596 -72177692 + AT_rich Low_complexity Low_complexity 1 41 0 2270 80 3 45 chr10 73411743 73412055 -72177233 - AluSp SINE Alu -14 299 1 207 200 0 0 chr10 73412476 73412521 -72176767 + A-rich Low_complexity Low_complexity 2 46 0 1553 193 27 3 chr10 73412669 73412965 -72176323 - AluJb SINE Alu -9 303 1 2929 156 62 11 chr10 73413360 73413929 -72175359 + L1MA8 LINE L1 5646 6243 -48 2083 133 7 0 chr10 73414036 73414336 -72174952 + AluSx SINE Alu 1 302 -10 534 168 89 0 chr10 73414367 73414468 -72174820 + HY1 scRNA scRNA 3 112 0 1250 172 48 139 chr10 73414483 73414815 -72174473 + AluJo SINE Alu 1 302 0 1702 170 7 10 chr10 73414835 73415123 -72174165 - AluJb SINE Alu -25 287 1 812 151 0 22 chr10 73415561 73415700 -72173588 + AluSg/x SINE Alu 171 306 -4 698 173 0 10 chr10 73415701 73415805 -72173483 - AluJo/FLAM SINE Alu -196 116 14 22 35 0 0 chr10 73416100 73416129 -72173159 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr10 73416197 73416226 -72173062 + AT_rich Low_complexity Low_complexity 1 29 0 2052 131 24 0 chr10 73416231 73416528 -72172760 + AluSx SINE Alu 7 310 -2 681 141 0 10 chr10 73416549 73416648 -72172640 - FLAM_C SINE Alu -25 118 21 1932 170 0 3 chr10 73416750 73417061 -72172227 - AluJb SINE Alu -2 310 1 879 193 20 0 chr10 73417258 73417408 -72171880 - FRAM SINE Alu -12 154 2 1959 132 4 0 chr10 73417540 73417852 -72171436 + AluSx SINE Alu 1 313 0 2013 148 23 0 chr10 73418298 73418603 -72170685 + AluSx SINE Alu 1 312 0 1473 214 3 20 chr10 73419196 73419499 -72169789 + AluJb SINE Alu 1 298 -14 2137 108 0 3 chr10 73419553 73419839 -72169449 + AluSc SINE Alu 1 285 -24 21 36 0 0 chr10 73419848 73419876 -72169412 + AT_rich Low_complexity Low_complexity 1 28 0 2098 112 10 7 chr10 73419970 73420266 -72169022 + AluSq SINE Alu 1 297 -16 411 233 12 0 chr10 73420325 73420411 -72168877 + FLAM_A SINE Alu 36 122 -20 338 238 122 82 chr10 73420470 73420617 -72168671 - AluJo/FRAM SINE Alu -4 298 146 2580 51 0 10 chr10 73420620 73420933 -72168355 + AluY SINE Alu 1 310 -1 893 222 24 24 chr10 73421014 73421221 -72168067 - MER3 DNA MER1_type 0 209 3 2027 122 14 3 chr10 73421221 73421516 -72167772 - AluSx SINE Alu -14 298 1 389 188 71 0 chr10 73421727 73421812 -72167476 + FLAM_A SINE Alu 43 133 0 1839 138 19 0 chr10 73422051 73422320 -72166968 + AluSx SINE Alu 1 274 -38 287 123 0 35 chr10 73422322 73422379 -72166909 + Alu SINE Alu 247 301 0 292 247 12 126 chr10 73422714 73422847 -72166441 + MIR3 SINE MIR 36 183 -25 1698 126 7 32 chr10 73422847 73423125 -72166163 + AluSx SINE Alu 37 307 -5 292 247 12 126 chr10 73423125 73423168 -72166120 + MIR3 SINE MIR 183 193 -15 2350 98 7 0 chr10 73423168 73423473 -72165815 - AluSg SINE Alu -3 307 1 292 247 12 126 chr10 73423473 73423487 -72165801 + MIR3 SINE MIR 193 207 -1 2225 102 0 0 chr10 73423738 73424032 -72165256 + AluY SINE Alu 1 294 -17 1826 171 10 3 chr10 73424052 73424356 -72164932 - AluJb SINE Alu -6 306 1 27 29 0 0 chr10 73424506 73424540 -72164748 + AT_rich Low_complexity Low_complexity 1 34 0 611 141 0 0 chr10 73424770 73424862 -72164426 - AluSg/x SINE Alu -7 302 211 843 96 9 0 chr10 73424862 73424977 -72164311 - AluSp SINE Alu -166 147 32 2111 88 24 27 chr10 73425038 73425333 -72163955 - AluSp SINE Alu -18 295 2 881 204 61 6 chr10 73425387 73425568 -72163720 - AluJb SINE Alu -3 309 119 717 188 0 8 chr10 73425601 73425718 -72163570 + AluJo/FLAM SINE Alu 1 116 -186 1730 159 10 10 chr10 73425720 73426010 -72163278 - AluSx SINE Alu -22 290 1 2260 112 3 0 chr10 73426018 73426313 -72162975 - AluSp SINE Alu -17 296 1 2302 90 0 0 chr10 73426323 73426622 -72162666 - AluY SINE Alu -12 299 1 934 225 4 38 chr10 73426892 73427132 -72162156 + AluJo SINE Alu 34 265 -47 216 0 0 0 chr10 73427141 73427165 -72162123 + (GA)n Simple_repeat Simple_repeat 1 24 0 598 249 91 12 chr10 73427233 73427398 -72161890 + AluJo SINE Alu 104 281 -31 1794 102 23 128 chr10 73427473 73427817 -72161471 - AluYb8 SINE Alu 0 308 1 1826 79 68 54 chr10 73427827 73428107 -72161181 - AluSg SINE Alu -26 284 1 960 227 123 38 chr10 73428112 73428583 -72160705 - L1MC4 LINE L1 -55 7987 7477 24 53 0 0 chr10 73429006 73429044 -72160244 + AT_rich Low_complexity Low_complexity 1 38 0 3388 149 2 0 chr10 73429210 73429741 -72159547 - L1PA14 LINE L1 -3 6158 5627 1618 119 146 0 chr10 73429944 73430204 -72159084 - AluSg SINE Alu -2 298 1 21 0 0 0 chr10 73430213 73430234 -72159054 + AT_rich Low_complexity Low_complexity 1 21 0 1684 126 38 0 chr10 73430381 73430642 -72158646 + AluSx SINE Alu 3 273 -39 26 64 0 0 chr10 73431365 73431412 -72157876 + AT_rich Low_complexity Low_complexity 1 47 0 739 60 0 20 chr10 73431523 73431623 -72157665 + L1PA4 LINE L1 6050 6147 -8 1933 123 30 0 chr10 73431645 73431945 -72157343 + AluSx SINE Alu 1 309 -3 1265 116 170 98 chr10 73431974 73432250 -72157038 + AluSx SINE Alu 9 304 -8 2135 116 0 0 chr10 73432252 73432555 -72156733 + AluSg SINE Alu 1 303 -7 492 234 86 8 chr10 73432587 73432715 -72156573 + AluJb SINE Alu 2 139 -173 1949 98 10 16 chr10 73432757 73433063 -72156225 + AluSq SINE Alu 2 305 -8 950 125 17 45 chr10 73433069 73433245 -72156043 + AluSp SINE Alu 133 303 -10 775 242 0 0 chr10 73433248 73433413 -72155875 + AluJ SINE Alu 137 301 -1 2247 65 3 23 chr10 73433427 73433737 -72155551 + AluY SINE Alu 1 304 -7 390 261 5 54 chr10 73434066 73434250 -72155038 + GA-rich Low_complexity Low_complexity 3 177 0 202 229 0 0 chr10 73434299 73434347 -72154941 + A-rich Low_complexity Low_complexity 1 48 0 2308 92 0 0 chr10 73435174 73435477 -72153811 + AluSq SINE Alu 1 303 -10 21 36 0 0 chr10 73435735 73435763 -72153525 + AT_rich Low_complexity Low_complexity 1 28 0 1181 178 28 9 chr10 73435838 73436052 -72153236 + MER20 DNA MER1_type 2 219 0 2064 123 3 0 chr10 73436167 73436467 -72152821 - AluSx SINE Alu -11 301 1 261 83 0 0 chr10 73436472 73436508 -72152780 + (TTTTA)n Simple_repeat Simple_repeat 4 39 0 1684 164 20 10 chr10 73436789 73437094 -72152194 - AluSq SINE Alu -5 308 1 1887 119 0 14 chr10 73437418 73437695 -72151593 + AluSx SINE Alu 1 273 -39 2180 100 0 0 chr10 73438252 73438543 -72150745 + AluSg SINE Alu 6 296 -14 2107 113 3 0 chr10 73438676 73438976 -72150312 - AluSq SINE Alu -12 301 1 1698 151 3 36 chr10 73439182 73439487 -72149801 - AluSx SINE Alu -17 295 1 784 179 15 0 chr10 73439492 73439626 -72149662 - AluJb SINE Alu -175 137 2 390 159 31 0 chr10 73439659 73439745 -72149543 + AluJb SINE Alu 169 233 -69 527 202 37 28 chr10 73439745 73439854 -72149434 - AluJb SINE Alu -34 278 169 528 167 9 46 chr10 73440222 73440330 -72148958 - MER5A DNA MER1_type -81 108 5 1718 144 20 23 chr10 73440479 73440778 -72148510 + AluJb SINE Alu 1 298 -14 2142 90 14 0 chr10 73440883 73441172 -72148116 - AluSq SINE Alu 0 313 21 798 158 0 0 chr10 73441239 73441366 -72147922 - AluJb SINE Alu -184 128 2 2019 107 17 0 chr10 73442089 73442380 -72146908 + AluSg1 SINE Alu 1 296 -13 21 71 0 0 chr10 73442543 73442585 -72146703 + AT_rich Low_complexity Low_complexity 1 42 0 1939 132 0 7 chr10 73442924 73443220 -72146068 + AluSx SINE Alu 1 294 -18 2086 103 10 10 chr10 73443222 73443524 -72145764 + AluSc SINE Alu 1 302 -7 1738 176 0 0 chr10 73444289 73444579 -72144709 + AluJb SINE Alu 1 290 -22 2091 117 0 0 chr10 73445340 73445630 -72143658 + AluSg SINE Alu 1 290 -20 971 203 6 0 chr10 73445721 73445884 -72143404 + FAM SINE Alu 5 168 -7 2391 60 0 7 chr10 73446158 73446456 -72142832 + AluSc SINE Alu 1 296 -13 818 174 0 0 chr10 73446697 73446835 -72142453 + FLAM_C SINE Alu 2 139 -4 1943 128 3 26 chr10 73446849 73447155 -72142133 + AluSx SINE Alu 1 299 -13 2245 91 0 0 chr10 73447155 73447451 -72141837 + AluSc SINE Alu 1 296 -13 261 222 28 83 chr10 73448231 73448303 -72140985 - MIR SINE MIR -58 150 83 2234 113 0 0 chr10 73448555 73448865 -72140423 + AluSx SINE Alu 1 310 -2 988 205 0 0 chr10 73448879 73449045 -72140243 + FRAM SINE Alu 1 166 0 2274 99 0 0 chr10 73449050 73449353 -72139935 + AluSg SINE Alu 1 303 -7 1990 119 0 26 chr10 73449486 73449797 -72139491 - AluSx SINE Alu -9 303 1 1323 177 8 0 chr10 73449945 73450188 -72139100 + AluJb SINE Alu 51 295 -17 2405 58 0 0 chr10 73450387 73450681 -72138607 - AluY SINE Alu -16 295 2 2012 108 21 3 chr10 73451020 73451307 -72137981 + AluSg SINE Alu 1 292 -18 655 187 0 43 chr10 73451444 73451583 -72137705 - FLAM_A SINE Alu 0 133 1 1715 166 0 7 chr10 73451819 73452115 -72137173 + AluSx SINE Alu 1 294 -18 346 210 19 0 chr10 73452115 73452194 -72137094 - L1MB5 LINE L1 -251 5923 5837 1219 151 56 36 chr10 73452214 73452258 -72137030 - L1MB7 LINE L1 -311 5873 5831 2049 86 14 0 chr10 73452258 73452569 -72136719 - AluSp SINE Alu 0 315 1 2227 84 3 13 chr10 73452574 73452882 -72136406 - AluSp SINE Alu -8 305 1 1219 151 56 36 chr10 73452882 73453081 -72136207 - L1MB7 LINE L1 -356 5828 5618 323 198 43 17 chr10 73453078 73453162 -72136126 - L1MDa LINE L1 -5177 1363 1274 * 1774 147 16 19 chr10 73453162 73453474 -72135814 - AluSx SINE Alu -1 311 1 323 198 43 17 chr10 73453474 73453505 -72135783 - L1MDa LINE L1 -5266 1274 1245 2145 127 32 21 chr10 73453507 73453595 -72135693 - MER41B LTR ERV1 -88 547 462 2462 43 0 3 chr10 73453595 73453894 -72135394 - AluY SINE Alu -13 298 1 2145 127 32 21 chr10 73453894 73454145 -72135143 - MER41B LTR ERV1 -173 462 204 1469 117 164 4 chr10 73454146 73454402 -72134886 - AluSx SINE Alu -15 297 1 682 140 0 0 chr10 73454426 73454526 -72134762 - FLAM_A SINE Alu -23 119 20 2903 212 82 71 chr10 73454539 73454591 -72134697 - L1MDa LINE L1 -5311 1229 1179 3763 118 37 66 chr10 73454591 73455245 -72134043 - MER41B LTR ERV1 0 635 1 2903 212 82 71 chr10 73455245 73455302 -72133986 - L1MDa LINE L1 -5361 1179 1124 1742 166 19 3 chr10 73455302 73455609 -72133679 - AluSx SINE Alu 0 312 1 2903 212 82 71 chr10 73455609 73456380 -72132908 - L1MDa LINE L1 -5416 1124 339 2320 86 0 0 chr10 73456381 73456685 -72132603 + AluY SINE Alu 1 304 -7 2220 89 0 7 chr10 73456694 73456997 -72132291 + AluSq SINE Alu 1 301 -12 207 0 0 0 chr10 73457689 73457712 -72131576 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 1781 146 0 14 chr10 73457904 73458198 -72131090 + AluJb SINE Alu 22 311 -1 216 86 0 0 chr10 73458222 73458257 -72131031 + (A)n Simple_repeat Simple_repeat 1 35 0 953 154 0 6 chr10 73458260 73458416 -72130872 + AluJb SINE Alu 123 277 -35 23 0 0 0 chr10 73458490 73458513 -72130775 + AT_rich Low_complexity Low_complexity 1 23 0 2133 121 0 6 chr10 73458562 73458876 -72130412 - AluSx SINE Alu 0 312 1 1000 170 242 81 chr10 73458918 73459148 -72130140 + MER31A LTR ERV1 1 193 -292 1885 135 7 3 chr10 73459148 73459452 -72129836 + AluSx SINE Alu 1 305 -7 1000 170 242 81 chr10 73459452 73459639 -72129649 + MER31A LTR ERV1 193 485 0 2169 92 7 3 chr10 73459658 73459961 -72129327 - AluSc SINE Alu -5 304 1 537 138 0 0 chr10 73461020 73461107 -72128181 - AluJ/FRAM SINE Alu 0 312 226 1346 63 5 37 chr10 73461207 73461440 -72127848 + AluY SINE Alu 111 311 0 2176 87 3 0 chr10 73461582 73461881 -72127407 - AluSg SINE Alu -10 300 1 4757 50 3 23 chr10 73463639 73463934 -72125354 - L1PA5 LINE L1 -1 6153 5854 2416 50 0 3 chr10 73463934 73464232 -72125056 + AluY SINE Alu 2 298 -13 4757 50 3 23 chr10 73464232 73464550 -72124738 - L1PA5 LINE L1 -300 5854 5552 2247 92 0 3 chr10 73464643 73464946 -72124342 + AluSq SINE Alu 1 302 -11 207 0 0 0 chr10 73465638 73465661 -72123627 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 1734 153 0 14 chr10 73465853 73466147 -72123141 + AluJb SINE Alu 22 311 -1 216 0 0 0 chr10 73466171 73466195 -72123093 + (A)n Simple_repeat Simple_repeat 1 24 0 303 184 0 165 chr10 73467211 73467271 -72122017 + MIR SINE MIR 34 70 -138 738 125 139 0 chr10 73467271 73467415 -72121873 - FRAM SINE Alu -2 164 1 303 184 0 165 chr10 73467415 73467463 -72121825 + MIR SINE MIR 70 124 -84 2379 53 0 0 chr10 73467520 73467820 -72121468 - AluY SINE Alu -11 300 1 2086 108 3 3 chr10 73468170 73468475 -72120813 + AluSg SINE Alu 1 305 -5 256 244 136 57 chr10 73468657 73468715 -72120573 - MIR SINE MIR 0 262 210 1574 141 35 14 chr10 73468715 73468999 -72120289 - AluJb SINE Alu -19 293 4 256 244 136 57 chr10 73468999 73469116 -72120172 - MIR SINE MIR -52 210 73 309 353 11 16 chr10 73469458 73469642 -72119646 - MIR SINE MIR -2 260 78 1904 152 3 7 chr10 73469930 73470240 -72119048 - AluJb SINE Alu -3 309 1 2209 110 0 0 chr10 73470496 73470795 -72118493 - AluSx SINE Alu -13 299 1 1468 119 0 0 chr10 73470998 73471208 -72118080 - AluSg/x SINE Alu -8 302 93 1897 86 175 139 chr10 73471209 73471830 -72117458 + LTR12 LTR ERV1 1 2212 -226 1628 86 0 0 chr10 73471830 73472040 -72117248 + AluSc SINE Alu 1 210 -99 1282 142 14 5 chr10 73472040 73472259 -72117029 + AluSg/x SINE Alu 78 298 -14 301 169 46 0 chr10 73472266 73472331 -72116957 + HY1 scRNA scRNA 45 112 0 733 247 16 11 chr10 73472347 73472529 -72116759 + AluJo SINE Alu 2 184 -128 1345 71 16 0 chr10 73472706 73472888 -72116400 + AluY SINE Alu 110 294 -17 818 182 52 67 chr10 73472897 73472989 -72116299 - L1ME LINE L1 -720 5446 5354 1961 156 0 0 chr10 73472989 73473296 -72115992 - AluSq SINE Alu -6 307 1 818 182 52 67 chr10 73473296 73473449 -72115839 - L1ME LINE L1 -812 5354 5200 1941 151 0 0 chr10 73473449 73473760 -72115528 - AluSx SINE Alu -1 311 1 818 182 52 67 chr10 73473760 73473805 -72115483 - L1ME LINE L1 -966 5200 5156 1770 128 0 67 chr10 73473805 73473969 -72115319 - AluJb SINE Alu -17 295 122 2354 63 0 7 chr10 73473969 73474271 -72115017 - AluY SINE Alu -10 301 2 1770 128 0 67 chr10 73474271 73474284 -72115004 - AluJb SINE Alu -190 122 110 2181 98 3 13 chr10 73474284 73474600 -72114688 - AluSq SINE Alu 0 313 1 1770 128 0 67 chr10 73474600 73474733 -72114555 - AluJb SINE Alu -202 110 5 818 182 52 67 chr10 73474733 73474818 -72114470 - L1ME LINE L1 -1010 5156 5071 1988 115 0 11 chr10 73474818 73475148 -72114140 - AluSx SINE Alu 0 327 1 818 182 52 67 chr10 73475148 73475502 -72113786 - L1ME LINE L1 -1095 5071 4585 719 130 0 0 chr10 73475503 73475603 -72113685 + U6 snRNA snRNA 1 100 -7 430 211 0 42 chr10 73475616 73475711 -72113577 - L1ME LINE L1 -1552 4594 4504 1867 134 25 0 chr10 73476104 73476403 -72112885 - AluSx SINE Alu 0 311 6 184 42 0 0 chr10 73476419 73476443 -72112845 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2138 77 7 11 chr10 73476443 73476729 -72112559 - AluSp SINE Alu -1 308 1 710 236 19 6 chr10 73477197 73477354 -72111934 + MIR SINE MIR 93 251 -11 1597 179 7 16 chr10 73477360 73477668 -72111620 - AluJo SINE Alu -6 306 2 203 238 0 0 chr10 73477927 73477969 -72111319 + MIR SINE MIR 41 82 -126 1929 119 27 0 chr10 73478711 73479005 -72110283 - AluY SINE Alu -7 304 3 2003 121 7 0 chr10 73479391 73479689 -72109599 + AluJb SINE Alu 1 300 -12 1674 152 34 3 chr10 73479726 73480023 -72109265 + AluJb SINE Alu 1 306 -6 565 130 0 78 chr10 73480143 73480258 -72109030 + L1MA4 LINE L1 6174 6279 -21 2075 127 0 3 chr10 73480259 73480550 -72108738 + AluSx SINE Alu 2 291 -21 2157 98 0 0 chr10 73480551 73480846 -72108442 + AluSx SINE Alu 1 295 -17 328 259 0 74 chr10 73480846 73480949 -72108339 - L1MDa LINE L1 -4697 1685 1493 2704 26 0 0 chr10 73480949 73481258 -72108030 - AluYb8 SINE Alu -9 309 1 328 259 0 74 chr10 73481258 73481276 -72108012 - L1MDa LINE L1 -4889 1493 1475 1199 152 38 0 chr10 73481276 73481487 -72107801 - AluJo SINE Alu -4 308 90 2210 96 0 7 chr10 73481624 73481925 -72107363 - AluSq SINE Alu -14 299 1 593 254 61 12 chr10 73481926 73482162 -72107126 - HERVL68 LTR ERVL -69 5461 2821 268 138 46 92 chr10 73482259 73482324 -72106964 - HERVL68 LTR ERVL -261 2776 2715 2123 113 6 0 chr10 73482374 73482685 -72106603 - AluSp SINE Alu 0 313 1 2143 123 3 0 chr10 73482685 73482995 -72106293 - AluSq SINE Alu -2 311 1 1809 146 0 20 chr10 73482997 73483298 -72105990 - AluJb SINE Alu -17 295 1 464 171 48 29 chr10 73483471 73483576 -72105712 - HERVL68 LTR ERVL -345 2692 2586 1108 169 48 60 chr10 73483576 73483825 -72105463 + AluJo SINE Alu 46 291 -21 25 31 0 0 chr10 73483974 73484006 -72105282 + GC_rich Low_complexity Low_complexity 1 32 0 801 100 0 0 chr10 73484949 73485059 -72104229 + AluSq/x SINE Alu 2 111 -202 1654 119 0 4 chr10 73485059 73485303 -72103985 + AluSq SINE Alu 71 313 0 1976 131 7 0 chr10 73486106 73486397 -72102891 - AluSx SINE Alu -18 294 2 1947 103 11 0 chr10 73486933 73487240 -72102048 - AluSq SINE Alu 0 310 1 779 140 0 29 chr10 73487683 73487819 -72101469 - FLAM_C SINE Alu 0 133 2 1913 120 38 0 chr10 73488146 73488437 -72100851 + AluSx SINE Alu 1 302 -10 1404 194 16 36 chr10 73488521 73488825 -72100463 - AluJo SINE Alu -14 298 1 1991 97 0 11 chr10 73488836 73489114 -72100174 - AluSx SINE Alu -7 305 31 2662 143 61 31 chr10 73489114 73489590 -72099698 - LTR2B LTR ERV1 0 490 1 760 217 16 26 chr10 73490287 73490476 -72098812 - L1ME2 LINE L1 -13 6151 5965 2018 119 3 0 chr10 73490477 73490779 -72098509 - AluSx SINE Alu -9 303 1 2201 90 3 0 chr10 73490807 73491097 -72098191 - AluSq SINE Alu -22 291 1 1311 154 68 106 chr10 73491100 73491411 -72097877 - AluJo SINE Alu -3 299 1 2022 102 7 0 chr10 73491632 73491925 -72097363 - AluY SINE Alu -16 295 1 514 278 86 5 chr10 73491925 73492112 -72097176 + MIR SINE MIR 47 248 -14 291 342 25 8 chr10 73492364 73492484 -72096804 + MIR SINE MIR 19 140 -68 384 369 105 23 chr10 73492775 73493081 -72096207 - L2 LINE L2 -3 3269 2939 269 239 88 29 chr10 73493442 73493551 -72095737 + MIR SINE MIR 22 133 -75 1805 160 0 0 chr10 73493663 73493963 -72095325 - AluJb SINE Alu 0 312 13 2022 167 29 27 chr10 73493963 73494237 -72095051 - L1 LINE L1 -1765 4381 4104 2416 70 0 0 chr10 73494237 73494536 -72094752 + AluY SINE Alu 1 299 -12 2022 167 29 27 chr10 73494536 73494674 -72094614 - L1 LINE L1 -2042 4104 3968 1925 192 20 157 chr10 73494662 73494846 -72094442 + L1 LINE L1 4513 4720 -1426 * 1504 160 0 8 chr10 73494846 73495096 -72094192 - AluJo SINE Alu -27 285 38 1925 192 20 157 chr10 73495096 73495216 -72094072 + L1 LINE L1 4720 4855 -1291 1895 101 60 0 chr10 73495216 73495511 -72093777 + AluSq SINE Alu 1 311 0 1925 192 20 157 chr10 73495511 73495938 -72093350 + L1 LINE L1 4855 5146 -1000 186 43 0 0 chr10 73495956 73495979 -72093309 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 446 85 387 47 chr10 73496020 73496126 -72093162 - AluJb SINE Alu -169 143 2 1972 135 3 3 chr10 73496158 73496469 -72092819 - AluSx SINE Alu -1 311 1 2017 123 3 0 chr10 73496553 73496853 -72092435 - AluSg SINE Alu -9 301 1 2191 105 0 3 chr10 73498141 73498447 -72090841 - AluSg1 SINE Alu -4 305 1 1737 152 24 0 chr10 73498646 73498936 -72090352 - AluJo SINE Alu -10 302 6 346 184 82 10 chr10 73498942 73499040 -72090248 - L1ME LINE L1 -438 5728 5624 346 206 196 11 chr10 73499045 73499137 -72090151 - L1ME LINE L1 -586 5578 5470 853 173 39 85 chr10 73499146 73499406 -72089882 - AluSg1 SINE Alu -8 301 54 1885 121 28 3 chr10 73499617 73499906 -72089382 - AluSx SINE Alu -16 296 1 1291 201 0 46 chr10 73499945 73500070 -72089218 + AluJb SINE Alu 12 141 -171 2276 79 7 0 chr10 73500070 73500374 -72088914 + AluSp SINE Alu 1 306 -7 1291 201 0 46 chr10 73500374 73500551 -72088737 + AluJb SINE Alu 141 300 -12 1910 128 3 13 chr10 73500583 73500881 -72088407 - AluSx SINE Alu -17 295 1 650 185 0 8 chr10 73501312 73501431 -72087857 - FLAM_C SINE Alu -13 120 3 208 98 24 24 chr10 73501437 73501478 -72087810 + (TTA)n Simple_repeat Simple_repeat 1 41 0 929 170 6 0 chr10 73501491 73501650 -72087638 - AluSg/x SINE Alu -17 293 134 1722 177 0 0 chr10 73501757 73502056 -72087232 - AluJb SINE Alu -9 303 5 1757 116 25 44 chr10 73502082 73502400 -72086888 + AluSx SINE Alu 1 312 0 21 0 0 0 chr10 73502993 73503014 -72086274 + AT_rich Low_complexity Low_complexity 1 21 0 1840 122 31 3 chr10 73503254 73503542 -72085746 - AluSx SINE Alu -16 296 1 1144 207 7 48 chr10 73503586 73503705 -72085583 + AluJb SINE Alu 18 140 -172 2231 79 10 0 chr10 73503705 73504008 -72085280 + AluSp SINE Alu 1 306 -7 1144 207 7 48 chr10 73504008 73504183 -72085105 + AluJb SINE Alu 140 300 -12 841 166 43 12 chr10 73504436 73504599 -72084689 + FAM SINE Alu 5 172 -3 769 167 7 36 chr10 73504604 73504742 -72084546 + AluJo SINE Alu 2 135 -177 2040 101 7 3 chr10 73505001 73505288 -72084000 + AluSg1 SINE Alu 1 288 -21 2896 97 17 43 chr10 73505420 73505635 -72083653 + L1PA15 LINE L1 5716 5935 -230 1803 146 23 0 chr10 73505635 73505937 -72083351 + AluSx SINE Alu 1 309 -3 2896 97 17 43 chr10 73505937 73506169 -72083119 + L1PA15 LINE L1 5935 6153 -12 198 0 0 0 chr10 73506169 73506191 -72083097 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 2896 97 17 43 chr10 73506191 73506204 -72083084 + L1PA15 LINE L1 6153 6165 0 1571 173 20 10 chr10 73506220 73506520 -72082768 + AluJb SINE Alu 1 303 -9 2036 111 13 16 chr10 73506521 73506827 -72082461 + AluSg SINE Alu 1 305 -5 1815 146 29 0 chr10 73506856 73507137 -72082151 + AluJb SINE Alu 3 291 -21 2244 104 3 0 chr10 73507143 73507452 -72081836 + AluSp SINE Alu 1 310 -3 2378 79 0 3 chr10 73507812 73508116 -72081172 + AluY SINE Alu 1 303 -8 862 145 7 28 chr10 73508126 73508271 -72081017 + AluJb SINE Alu 1 142 -170 198 0 0 0 chr10 73508371 73508393 -72080895 + (TAAA)n Simple_repeat Simple_repeat 4 25 0 242 175 0 0 chr10 73508397 73508437 -72080851 + L1M4 LINE L1 5834 5873 -311 346 210 19 0 chr10 73508457 73508536 -72080752 + L1MB5 LINE L1 5837 5923 -251 1715 166 0 7 chr10 73508536 73508832 -72080456 - AluSx SINE Alu -18 294 1 655 187 0 43 chr10 73509068 73509207 -72080081 + FLAM_A SINE Alu 1 133 0 2012 108 21 3 chr10 73509343 73509630 -72079658 - AluSg SINE Alu -18 292 1 2412 55 0 19 chr10 73509969 73510281 -72079007 + AluY SINE Alu 2 307 -4 823 222 24 24 chr10 73510362 73510569 -72078719 - MER3 DNA MER1_type 0 209 3 1928 122 14 3 chr10 73510569 73510864 -72078424 - AluSx SINE Alu -14 298 1 390 188 71 0 chr10 73511075 73511160 -72078128 + FLAM_A SINE Alu 43 133 0 1737 138 19 0 chr10 73511400 73511669 -72077619 + AluSx SINE Alu 1 274 -38 284 123 0 35 chr10 73511671 73511728 -72077560 + Alu SINE Alu 247 301 0 227 293 30 30 chr10 73512063 73512162 -72077126 + MIR SINE MIR 36 134 -128 459 74 25 37 chr10 73512353 73512434 -72076854 - AluY SINE Alu -230 81 2 1220 90 24 0 chr10 73512536 73512702 -72076586 + AluSx SINE Alu 1 170 -142 286 180 16 33 chr10 73512702 73512763 -72076525 + AluSc SINE Alu 229 288 -11 1918 134 7 10 chr10 73513297 73513596 -72075692 + AluSx SINE Alu 1 298 -14 989 166 15 10 chr10 73513745 73513950 -72075338 - AluJb SINE Alu -4 308 103 855 83 100 0 chr10 73513950 73514070 -72075218 + AluY SINE Alu 1 132 -179 677 175 9 0 chr10 73514104 73514218 -72075070 - AluJb SINE Alu -194 118 4 2308 92 0 0 chr10 73515012 73515315 -72073973 + AluSq SINE Alu 1 303 -10 21 36 0 0 chr10 73515573 73515601 -72073687 + AT_rich Low_complexity Low_complexity 1 28 0 1181 178 28 9 chr10 73515676 73515890 -72073398 + MER20 DNA MER1_type 2 219 0 2063 123 3 0 chr10 73516006 73516306 -72072982 - AluSx SINE Alu -11 301 1 261 83 0 0 chr10 73516311 73516347 -72072941 + (TTTTA)n Simple_repeat Simple_repeat 4 39 0 26 30 0 0 chr10 73516554 73516587 -72072701 + AT_rich Low_complexity Low_complexity 1 33 0 1621 174 16 10 chr10 73516628 73516933 -72072355 - AluSx SINE Alu -5 307 1 1887 119 0 14 chr10 73517257 73517534 -72071754 + AluSx SINE Alu 1 273 -39 2166 103 0 0 chr10 73518090 73518381 -72070907 + AluSg SINE Alu 6 296 -14 1952 120 7 7 chr10 73518514 73518815 -72070473 - AluSq SINE Alu -12 301 1 1689 154 3 33 chr10 73519021 73519326 -72069962 - AluSx SINE Alu -16 296 1 784 179 15 0 chr10 73519331 73519465 -72069823 - AluJb SINE Alu -175 137 2 390 159 31 0 chr10 73519498 73519584 -72069704 + AluJb SINE Alu 169 233 -69 527 202 37 28 chr10 73519584 73519693 -72069595 - AluJb SINE Alu -34 278 169 528 167 9 46 chr10 73520061 73520169 -72069119 - MER5A DNA MER1_type -81 108 5 1709 144 20 24 chr10 73520318 73520616 -72068672 + AluJb SINE Alu 1 297 -15 2069 98 14 0 chr10 73520700 73520985 -72068303 - AluSq SINE Alu -4 309 21 798 158 0 0 chr10 73521052 73521179 -72068109 - AluJb SINE Alu -184 128 2 2010 107 17 0 chr10 73521901 73522191 -72067097 + AluSg1 SINE Alu 1 295 -14 21 71 0 0 chr10 73522354 73522396 -72066892 + AT_rich Low_complexity Low_complexity 1 42 0 1909 129 3 7 chr10 73522735 73523030 -72066258 + AluSx SINE Alu 1 294 -18 2030 109 10 10 chr10 73523032 73523334 -72065954 + AluSc SINE Alu 1 302 -7 1754 172 0 0 chr10 73524099 73524389 -72064899 + AluJb SINE Alu 1 290 -22 2146 117 0 0 chr10 73525150 73525448 -72063840 + AluSg SINE Alu 1 298 -12 945 209 6 0 chr10 73525539 73525702 -72063586 + FAM SINE Alu 5 168 -7 2387 63 0 7 chr10 73525976 73526275 -72063013 + AluSc SINE Alu 1 297 -12 818 174 0 0 chr10 73526516 73526654 -72062634 + FLAM_C SINE Alu 2 139 -4 1911 127 7 29 chr10 73526668 73526976 -72062312 + AluSx SINE Alu 1 301 -11 2276 98 3 0 chr10 73526976 73527272 -72062016 + AluSc SINE Alu 1 297 -12 229 194 30 90 chr10 73528057 73528124 -72061164 - MIR SINE MIR -63 145 83 2285 125 0 0 chr10 73528376 73528688 -72060600 + AluSx SINE Alu 1 312 0 889 190 6 6 chr10 73528706 73528864 -72060424 + FRAM SINE Alu 11 168 -8 2354 78 0 7 chr10 73528867 73529160 -72060128 + AluSg SINE Alu 1 291 -19 775 157 43 0 chr10 73529171 73529311 -72059977 - Tigger1 DNA MER2_type -621 1797 1652 558 121 66 0 chr10 73529312 73529403 -72059885 - AluSg SINE Alu -186 124 28 2110 86 60 0 chr10 73529451 73529753 -72059535 + AluY SINE Alu 1 318 0 1031 153 6 12 chr10 73529754 73529924 -72059364 + AluJb SINE Alu 134 302 -10 5965 132 88 139 chr10 73529928 73530491 -72058797 - Tigger1 DNA MER2_type -969 1449 859 710 120 0 96 chr10 73530491 73530616 -72058672 - FRAM SINE Alu -19 157 45 5965 132 88 139 chr10 73530616 73531043 -72058245 - Tigger1 DNA MER2_type -1559 859 412 1465 182 29 26 chr10 73531043 73531351 -72057937 - AluJb SINE Alu -3 309 1 5965 132 88 139 chr10 73531351 73531370 -72057918 - Tigger1 DNA MER2_type -2006 412 394 2209 103 10 0 chr10 73531370 73531661 -72057627 - AluSx SINE Alu -15 297 4 5965 132 88 139 chr10 73531661 73531673 -72057615 - Tigger1 DNA MER2_type -2024 394 383 2179 126 0 3 chr10 73531673 73531974 -72057314 - AluSx SINE Alu -11 301 2 5965 132 88 139 chr10 73531974 73532351 -72056937 - Tigger1 DNA MER2_type -2035 383 2 235 102 0 41 chr10 73532364 73532413 -72056875 + L1MB7 LINE L1 6138 6184 0 1493 209 28 0 chr10 73532432 73532719 -72056569 + AluJo SINE Alu 1 295 -17 2267 108 0 3 chr10 73533366 73533663 -72055625 + AluSx SINE Alu 1 296 -16 1089 118 59 12 chr10 73533782 73533952 -72055336 + AluSg1 SINE Alu 1 178 -131 1588 199 52 11 chr10 73534071 73534490 -72054798 - MER31-int LTR ERV1 -1022 4101 3498 2484 74 0 0 chr10 73534490 73534840 -72054448 + AluY SINE Alu 1 350 0 1317 186 86 10 chr10 73534843 73535144 -72054144 + L1MB7 LINE L1 5798 6121 -63 2250 113 0 0 chr10 73535144 73535436 -72053852 - AluSp SINE Alu -21 292 1 1726 163 7 27 chr10 73535466 73535760 -72053528 - AluJb SINE Alu -24 288 1 792 217 151 40 chr10 73535830 73536102 -72053186 - HERVL68 LTR ERVL -467 2570 2269 259 79 0 26 chr10 73536146 73536184 -72053104 - MER61A LTR ERV1 0 343 307 232 143 0 0 chr10 73536188 73536223 -72053065 - Alu SINE Alu -265 37 3 284 153 34 17 chr10 73536261 73536320 -72052968 - HERVL68 LTR ERVL -2356 681 622 269 324 25 0 chr10 73536754 73536877 -72052411 - HERVL68 LTR ERVL -2574 463 247 1275 186 53 120 chr10 73537067 73537535 -72051753 + LTR68 LTR ERV1 1 437 -303 1757 120 85 0 chr10 73540025 73540283 -72049005 + AluSg SINE Alu 1 280 -30 2284 106 10 3 chr10 73540307 73540608 -72048680 + AluSx SINE Alu 3 305 -7 1295 97 6 0 chr10 73540942 73541107 -72048181 + AluSp SINE Alu 1 166 -147 2427 165 62 9 chr10 73541107 73541561 -72047727 - MER9 LTR ERVK 0 511 34 3408 215 34 24 chr10 73541568 73543040 -72046248 - HERVK9 LTR ERVK 0 7321 5183 933 199 16 22 chr10 73543053 73543383 -72045905 - HERVK9 LTR ERVK -730 5186 5044 332 148 0 19 chr10 73543375 73543429 -72045859 - HERVK9 LTR ERVK -990 4926 4874 * 3412 60 16 5 chr10 73543453 73543888 -72045400 - HERVK9 LTR ERVK -1698 4218 3779 * 17524 110 14 13 chr10 73543881 73543936 -72045352 - HERVK9 LTR ERVK -2066 3850 3797 2435 73 3 3 chr10 73543936 73544239 -72045049 - AluY SINE Alu -8 303 1 17524 110 14 13 chr10 73544239 73545383 -72043905 - HERVK9 LTR ERVK -2119 3797 2655 2515 73 0 0 chr10 73545383 73545685 -72043603 + AluY SINE Alu 1 302 -9 17524 110 14 13 chr10 73545685 73546953 -72042335 - HERVK9 LTR ERVK -3261 2655 1377 2414 78 3 3 chr10 73546953 73547260 -72042028 - AluY SINE Alu -4 307 1 17524 110 14 13 chr10 73547260 73547291 -72041997 - HERVK9 LTR ERVK -4539 1377 1348 2484 204 22 33 chr10 73547292 73548140 -72041148 - HERVK9 LTR ERVK -5305 611 1 2465 172 57 4 chr10 73548140 73548600 -72040688 - MER9 LTR ERVK 0 511 28 633 101 239 0 chr10 73548601 73548710 -72040578 + AluSp/q SINE Alu 161 295 -18 180 214 214 43 chr10 73548902 73549019 -72040269 - MIR SINE MIR -79 183 47 250 261 57 34 chr10 73549717 73549805 -72039483 + MER103 DNA DNA 10 99 -67 337 296 120 0 chr10 73549908 73550016 -72039272 - MIR3 SINE MIR -48 160 40 29 0 0 0 chr10 73550145 73550174 -72039114 + AT_rich Low_complexity Low_complexity 1 29 0 2572 177 108 21 chr10 73550472 73551047 -72038241 + MLT1E2 LTR MaLR 1 625 -1 2396 105 0 3 chr10 73552348 73552662 -72036626 - AluSq SINE Alu 0 313 1 816 209 6 6 chr10 73553026 73553189 -72036099 - FRAM SINE Alu -3 163 1 247 57 0 29 chr10 73553222 73553257 -72036031 + LTR39 LTR ERV1 1 34 -749 2594 53 0 3 chr10 73553273 73553576 -72035712 - AluY SINE Alu -9 302 1 21 0 0 0 chr10 73553576 73553597 -72035691 + AT_rich Low_complexity Low_complexity 1 21 0 2473 69 20 0 chr10 73553635 73553963 -72035325 - AluSg SINE Alu 0 335 2 207 0 0 0 chr10 73554029 73554052 -72035236 + (T)n Simple_repeat Simple_repeat 1 23 0 2670 154 76 32 chr10 73554099 73554598 -72034690 + LTR39 LTR ERV1 104 624 -159 939 10 0 0 chr10 73554598 73554701 -72034587 + AluYa5/8 SINE Alu 203 305 -5 778 235 6 19 chr10 73554701 73554863 -72034425 + LTR39 LTR ERV1 616 775 -8 342 0 0 0 chr10 73556135 73556173 -72033115 + (TA)n Simple_repeat Simple_repeat 2 39 0 2276 88 7 0 chr10 73556187 73556471 -72032817 - AluSp SINE Alu -27 286 1 304 216 80 80 chr10 73557440 73557565 -72031723 - L1MD2 LINE L1 -2 6357 6233 1034 133 133 0 chr10 73557930 73558110 -72031178 - MER39B LTR ERV1 -447 206 3 250 268 14 0 chr10 73559279 73559350 -72029938 + MER5A DNA MER1_type 11 82 -107 1150 152 36 58 chr10 73560024 73560199 -72029089 + MER20 DNA MER1_type 1 171 -48 475 215 8 66 chr10 73560199 73560320 -72028968 - MER81 DNA DNA 0 114 1 1150 152 36 58 chr10 73560320 73560368 -72028920 + MER20 DNA MER1_type 171 219 0 1336 169 74 27 chr10 73560484 73560780 -72028508 - AluJo SINE Alu 0 312 3 259 285 44 36 chr10 73560781 73560918 -72028370 + L2 LINE L2 1873 2010 -1304 2137 95 0 68 chr10 73560981 73561307 -72027981 - AluSx SINE Alu -8 304 1 2252 105 0 3 chr10 73562814 73563109 -72026179 - AluSg SINE Alu -15 295 2 914 172 0 0 chr10 73563211 73563362 -72025926 - FRAM SINE Alu -15 161 11 1148 82 22 82 chr10 73563409 73563592 -72025696 + AluSc SINE Alu 1 172 -137 1873 177 0 3 chr10 73563717 73564028 -72025260 - AluJb SINE Alu -2 310 1 21 36 0 0 chr10 73564034 73564062 -72025226 + AT_rich Low_complexity Low_complexity 1 28 0 897 118 0 0 chr10 73564073 73564192 -72025096 - AluJo SINE Alu -7 305 187 555 160 0 32 chr10 73564193 73564287 -72025001 - AluJo SINE Alu -170 142 52 827 156 0 0 chr10 73564307 73564429 -72024859 - FLAM_C SINE Alu -7 126 5 2362 84 0 0 chr10 73567748 73568035 -72021253 - AluY SINE Alu -24 287 1 2128 112 3 3 chr10 73568374 73568660 -72020628 - AluSg SINE Alu -8 302 17 516 348 10 40 chr10 73568959 73569059 -72020229 + L3 LINE CR1 1277 1378 -199 1780 156 25 3 chr10 73569059 73569341 -72019947 - AluJo SINE Alu -23 289 2 516 348 10 40 chr10 73569341 73569539 -72019749 + L3 LINE CR1 1378 1566 -11 440 290 55 14 chr10 73569911 73570056 -72019232 + MIR SINE MIR 35 185 -77 22 80 0 0 chr10 73570167 73570217 -72019071 + AT_rich Low_complexity Low_complexity 1 50 0 2155 94 38 3 chr10 73570791 73571078 -72018210 - AluSc SINE Alu -12 297 1 975 73 7 44 chr10 73571080 73571216 -72018072 - AluSq/x SINE Alu -180 132 2 2407 104 0 0 chr10 73571233 73571542 -72017746 - AluSq SINE Alu -4 309 1 2611 46 3 3 chr10 73572167 73572474 -72016814 - AluY SINE Alu -4 307 1 2121 106 33 0 chr10 73572983 73573284 -72016004 - AluSp SINE Alu -2 311 1 322 224 56 70 chr10 73574837 73574966 -72014322 + MIR3 SINE MIR 11 143 -86 244 339 83 8 chr10 73576353 73576474 -72012814 - L2 LINE L2 -1 3312 3183 243 88 0 0 chr10 73576509 73576543 -72012745 + (A)n Simple_repeat Simple_repeat 1 34 0 292 322 76 17 chr10 73576601 73576719 -72012569 + L3 LINE CR1 1196 1320 -257 1343 156 37 0 chr10 73576770 73577013 -72012275 - L1MB3 LINE L1 -4 6179 5928 633 200 64 0 chr10 73577441 73577566 -72011722 + AluJo/FLAM SINE Alu 1 133 -169 2305 89 0 13 chr10 73577569 73577704 -72011584 + AluSq SINE Alu 2 137 -166 2269 97 0 35 chr10 73577704 73577837 -72011451 + AluSg SINE Alu 1 137 -173 2248 110 0 10 chr10 73577837 73578137 -72011151 + AluSx SINE Alu 1 297 -15 2269 97 0 35 chr10 73578137 73578313 -72010975 + AluSg SINE Alu 137 299 -11 2305 89 0 13 chr10 73578313 73578480 -72010808 + AluSq SINE Alu 137 300 -3 914 204 6 0 chr10 73578483 73578640 -72010648 + FRAM SINE Alu 1 158 -8 1150 137 6 6 chr10 73579360 73579535 -72009753 - AluSx SINE Alu -137 175 1 21 82 0 0 chr10 73579638 73579687 -72009601 + AT_rich Low_complexity Low_complexity 1 49 0 461 214 61 150 chr10 73579795 73579948 -72009340 + MIR SINE MIR 8 173 -89 2259 108 0 3 chr10 73579948 73580244 -72009044 + AluSx SINE Alu 1 295 -17 461 214 61 150 chr10 73580244 73580271 -72009017 + MIR SINE MIR 173 201 -61 1421 155 126 60 chr10 73580271 73580588 -72008700 - MER46C DNA MER2_type 0 338 1 461 214 61 150 chr10 73580588 73580686 -72008602 + MIR SINE MIR 201 262 0 2078 135 3 3 chr10 73581624 73581935 -72007353 - AluSp SINE Alu -2 311 1 734 279 121 30 chr10 73582243 73582487 -72006801 + L1ME4a LINE L1 5624 5844 -277 2360 95 3 3 chr10 73582487 73582793 -72006495 + AluSq SINE Alu 1 306 -7 734 279 121 30 chr10 73582793 73582951 -72006337 + L1ME4a LINE L1 5844 6072 -49 2015 147 0 16 chr10 73582951 73583264 -72006024 - AluJb SINE Alu -4 308 1 734 279 121 30 chr10 73583264 73583300 -72005988 + L1ME4a LINE L1 6072 6103 -18 955 158 0 0 chr10 73583311 73583444 -72005844 - FLAM_C SINE Alu 0 133 1 25 31 0 0 chr10 73583451 73583483 -72005805 + AT_rich Low_complexity Low_complexity 1 32 0 358 197 16 0 chr10 73583912 73583973 -72005315 + AluJb SINE Alu 1 62 -240 2320 104 3 0 chr10 73583973 73584280 -72005008 - AluSp SINE Alu -5 308 1 1499 149 21 4 chr10 73584280 73584520 -72004768 + AluJb SINE Alu 54 297 -15 1956 138 0 0 chr10 73584713 73585019 -72004269 - AluSg SINE Alu 0 306 1 712 154 0 0 chr10 73585974 73586078 -72003210 - U6 snRNA snRNA -3 104 1 183 42 0 0 chr10 73586512 73586536 -72002752 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1744 164 3 10 chr10 73586539 73586832 -72002456 - AluJo SINE Alu -21 291 1 558 257 94 6 chr10 73586879 73587050 -72002238 + MIR SINE MIR 58 243 -19 * 664 237 49 49 chr10 73587045 73587269 -72002019 - L2 LINE L2 0 3313 3090 22 0 0 0 chr10 73587956 73587978 -72001310 + AT_rich Low_complexity Low_complexity 1 22 0 2248 107 3 0 chr10 73589058 73589356 -71999932 + AluSx SINE Alu 1 299 -13 2539 76 0 0 chr10 73589450 73589754 -71999534 + AluY SINE Alu 1 304 -7 2276 112 0 0 chr10 73589754 73590057 -71999231 + AluSc SINE Alu 1 303 -6 2277 123 0 0 chr10 73590392 73590701 -71998587 + AluSg SINE Alu 1 309 -1 243 131 351 71 chr10 73590825 73590993 -71998295 - L1MC5 LINE L1 -77 7884 7670 1597 112 0 9 chr10 73591011 73591235 -71998053 - AluSq SINE Alu -22 291 70 1413 155 0 0 chr10 73591336 73591549 -71997739 - AluSx SINE Alu -99 213 1 2353 82 3 0 chr10 73591577 73591870 -71997418 - AluSq SINE Alu -19 294 1 1314 148 39 51 chr10 73591905 73592075 -71997213 - L1MB5 LINE L1 0 6174 6006 2158 104 34 0 chr10 73592075 73592373 -71996915 - AluSq SINE Alu -5 308 1 1314 148 39 51 chr10 73592373 73592458 -71996830 - L1MB5 LINE L1 -168 6006 5922 2056 102 33 143 chr10 73592458 73592849 -71996439 + Tigger3(Golem) DNA MER2_type 1 3029 0 516 138 0 1 chr10 73592849 73592937 -71996351 - L1MB7 LINE L1 -261 5923 5837 * 1467 194 54 28 chr10 73592936 73593327 -71995961 - L1ME2 LINE L1 -22 6142 5742 23 0 0 0 chr10 73593421 73593444 -71995844 + AT_rich Low_complexity Low_complexity 1 23 0 1719 172 7 20 chr10 73593809 73594112 -71995176 - AluJb SINE Alu -13 299 1 23 0 0 0 chr10 73594239 73594262 -71995026 + AT_rich Low_complexity Low_complexity 1 23 0 2133 117 6 22 chr10 73594310 73594627 -71994661 + AluSx SINE Alu 1 312 0 1252 216 220 33 chr10 73594632 73595138 -71994150 - L1MC5 LINE L1 -45 7916 7279 180 0 0 0 chr10 73595138 73595158 -71994130 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 1252 216 220 33 chr10 73595158 73595252 -71994036 - L1MC5 LINE L1 -682 7279 7204 618 290 135 48 chr10 73595238 73595742 -71993546 - HAL1b LINE L1 -643 705 158 * 578 236 0 0 chr10 73595830 73595936 -71993352 - FAM SINE Alu -9 176 71 2012 94 62 0 chr10 73596081 73596357 -71992931 + AluSq SINE Alu 1 293 -20 294 29 0 0 chr10 73596378 73596413 -71992875 + (TA)n Simple_repeat Simple_repeat 2 36 0 302 174 29 29 chr10 73596424 73596493 -71992795 + AluJ/FRAM SINE Alu 232 300 -2 383 304 30 130 chr10 73596564 73596834 -71992454 - L2 LINE L2 -52 3220 2978 1470 171 20 34 chr10 73596860 73597153 -71992135 + AluJo SINE Alu 7 295 -17 192 372 0 12 chr10 73597285 73597371 -71991917 - L2 LINE L2 -800 2514 2430 2311 114 7 0 chr10 73597388 73597696 -71991592 + AluSq SINE Alu 1 310 -3 827 109 4 61 chr10 73597699 73597773 -71991515 + (GGAA)n Simple_repeat Simple_repeat 1 78 -727 2266 98 0 19 chr10 73597773 73598080 -71991208 + AluSx SINE Alu 1 301 -11 2137 132 0 6 chr10 73598082 73598393 -71990895 + AluSc SINE Alu 1 309 0 827 109 4 61 chr10 73598393 73598552 -71990736 + (GGAA)n Simple_repeat Simple_repeat 79 805 0 2126 120 10 0 chr10 73598559 73598867 -71990421 + AluSx SINE Alu 1 311 -1 21 36 0 0 chr10 73599269 73599297 -71989991 + AT_rich Low_complexity Low_complexity 1 28 0 892 150 0 0 chr10 73599297 73599417 -71989871 - FLAM_C SINE Alu -23 120 1 1319 207 4 4 chr10 73599472 73599733 -71989555 - AluJo SINE Alu -12 300 40 832 232 6 18 chr10 73599762 73599930 -71989358 - FRAM SINE Alu 0 166 1 623 189 0 0 chr10 73600041 73600136 -71989152 - AluJ/FLAM SINE Alu -216 96 2 22 0 0 0 chr10 73600136 73600158 -71989130 + AT_rich Low_complexity Low_complexity 1 22 0 203 154 51 0 chr10 73600212 73600251 -71989037 + (TATG)n Simple_repeat Simple_repeat 3 43 0 381 211 42 0 chr10 73600260 73600331 -71988957 - MIR SINE MIR -181 81 8 1897 144 4 0 chr10 73600609 73600887 -71988401 + AluJb SINE Alu 16 294 -18 318 67 0 0 chr10 73600997 73601042 -71988246 + (TG)n Simple_repeat Simple_repeat 1 45 0 478 170 200 10 chr10 73601080 73601180 -71988108 - FLAM_A SINE Alu -14 119 1 198 0 0 0 chr10 73601597 73601619 -71987669 + (TTTTA)n Simple_repeat Simple_repeat 3 24 0 1662 153 4 39 chr10 73601622 73601779 -71987509 - AluJo SINE Alu -24 288 144 1952 142 3 3 chr10 73601779 73602074 -71987214 - AluSx SINE Alu -17 295 1 1662 153 4 39 chr10 73602074 73602197 -71987091 - AluJo SINE Alu -168 144 18 2357 99 0 19 chr10 73602396 73602710 -71986578 + AluSp SINE Alu 1 308 -5 228 150 0 0 chr10 73603132 73603172 -71986116 - L1MB8 LINE L1 0 6178 6139 1083 170 6 6 chr10 73603360 73603531 -71985757 + FAM SINE Alu 1 171 -4 2072 106 0 67 chr10 73603537 73603868 -71985420 + AluSx SINE Alu 4 312 0 2043 141 0 10 chr10 73603962 73604274 -71985014 + AluSx SINE Alu 1 309 -3 205 67 67 17 chr10 73604278 73604300 -71984988 + (TA)n Simple_repeat Simple_repeat 1 20 -43 1641 176 31 0 chr10 73604300 73604589 -71984699 + AluJb SINE Alu 1 298 -14 205 67 67 17 chr10 73604589 73604626 -71984662 + (TA)n Simple_repeat Simple_repeat 20 63 0 189 0 0 0 chr10 73604673 73604694 -71984594 + (T)n Simple_repeat Simple_repeat 1 21 0 1109 87 7 27 chr10 73604713 73604863 -71984425 + AluSg SINE Alu 1 147 -163 2256 88 0 3 chr10 73604963 73605246 -71984042 - AluSq SINE Alu -31 282 1 657 263 72 82 chr10 73605285 73605528 -71983760 - L1ME4a LINE L1 -160 5961 5717 2305 113 0 3 chr10 73605528 73605838 -71983450 + AluSq SINE Alu 1 309 -4 657 263 72 82 chr10 73605838 73606207 -71983081 - L1ME4a LINE L1 -404 5717 5355 2161 132 0 0 chr10 73606338 73606626 -71982662 + AluSx SINE Alu 1 288 -24 237 133 22 0 chr10 73607173 73607218 -71982070 + Alu SINE Alu 1 46 -254 288 98 0 39 chr10 73607319 73607370 -71981918 + AluSp/q SINE Alu 249 297 -6 25 31 0 0 chr10 73608125 73608157 -71981131 + AT_rich Low_complexity Low_complexity 1 32 0 2272 119 0 0 chr10 73608973 73609284 -71980004 + AluSx SINE Alu 1 311 -1 2368 90 0 7 chr10 73609635 73609936 -71979352 + AluY SINE Alu 10 308 -3 315 0 0 0 chr10 73609936 73609971 -71979317 + (TA)n Simple_repeat Simple_repeat 2 36 0 1984 145 0 7 chr10 73609977 73610273 -71979015 + AluJb SINE Alu 1 294 -18 526 279 79 41 chr10 73610699 73610829 -71978459 - L1MC4 LINE L1 -17 8025 7901 899 131 30 56 chr10 73610829 73611005 -71978283 - L1MA5A LINE L1 -13 6284 6112 2343 103 0 0 chr10 73611005 73611306 -71977982 - AluSx SINE Alu -11 301 1 899 131 30 56 chr10 73611306 73611327 -71977961 - L1MA5A LINE L1 -185 6112 6092 526 279 79 41 chr10 73611327 73611512 -71977776 - L1MC4 LINE L1 -141 7901 7698 470 243 55 130 chr10 73612170 73612667 -71976621 - L1MC5 LINE L1 -350 7674 7249 284 254 17 0 chr10 73612738 73612797 -71976491 - L3 LINE CR1 -20 1557 1498 2126 104 24 0 chr10 73612920 73613207 -71976081 + AluSc SINE Alu 12 305 -4 2292 99 3 0 chr10 73613552 73613844 -71975444 - AluSp SINE Alu -20 293 1 2222 117 7 3 chr10 73613849 73614157 -71975131 - AluSx SINE Alu -3 309 1 297 128 0 0 chr10 73614323 73614370 -71974918 + (CA)n Simple_repeat Simple_repeat 2 48 0 2229 104 0 3 chr10 73614376 73614664 -71974624 - AluSq SINE Alu -26 287 1 232 250 10 42 chr10 73614758 73614854 -71974434 - L1ME LINE L1 -202 5919 5827 1684 135 28 83 chr10 73614890 73615215 -71974073 - AluJb SINE Alu -5 307 1 1584 182 43 0 chr10 73615253 73615533 -71973755 - AluJb SINE Alu -20 292 1 314 29 0 0 chr10 73615559 73615594 -71973694 + U2 snRNA snRNA 1 35 -153 587 198 60 0 chr10 73615600 73615716 -71973572 - FLAM_C SINE Alu -18 125 3 2176 116 7 0 chr10 73615822 73616124 -71973164 - AluSx SINE Alu -8 304 1 975 98 0 182 chr10 73616136 73616361 -71972927 - AluSx SINE Alu -117 195 12 574 204 31 58 chr10 73616371 73616427 -71972861 - L1ME LINE L1 -302 5819 5763 1407 201 30 27 chr10 73616427 73616725 -71972563 - AluJo SINE Alu -13 299 1 574 204 31 58 chr10 73616725 73616859 -71972429 - L1ME LINE L1 -358 5763 5634 2413 94 0 3 chr10 73616907 73617214 -71972074 - AluSx SINE Alu -6 306 1 288 345 43 0 chr10 73617486 73617602 -71971686 - L2 LINE L2 -24 3289 3169 1588 110 0 5 chr10 73617784 73618002 -71971286 + AluSg SINE Alu 1 217 -93 1079 135 10 45 chr10 73618156 73618356 -71970932 - AluJb SINE Alu -119 193 1 283 283 228 30 chr10 73618367 73618600 -71970688 - L3 LINE CR1 -361 1216 938 28 0 0 0 chr10 73619108 73619136 -71970152 + AT_rich Low_complexity Low_complexity 1 28 0 1117 160 4 80 chr10 73619176 73619261 -71970027 - AluJo SINE Alu -92 220 130 2251 93 0 7 chr10 73619261 73619574 -71969714 - AluSq SINE Alu 0 313 5 1117 160 4 80 chr10 73619574 73619725 -71969563 - AluJo SINE Alu -182 130 2 1930 144 0 23 chr10 73620253 73620559 -71968729 - AluJo SINE Alu -13 299 1 277 203 58 65 chr10 73620907 73621045 -71968243 - L1MC5 LINE L1 -214 7747 7611 1500 137 25 121 chr10 73621048 73621370 -71967918 - AluSx SINE Alu -21 291 1 771 196 42 28 chr10 73621370 73621513 -71967775 - AluJo SINE Alu -165 147 3 1028 205 137 49 chr10 73621558 73621944 -71967344 - L1MC5 LINE L1 -73 7888 7469 2383 84 0 0 chr10 73622186 73622484 -71966804 - AluSc SINE Alu -11 298 1 729 158 108 8 chr10 73622488 73622608 -71966680 - FLAM_C SINE Alu -10 133 2 452 254 71 42 chr10 73622617 73622857 -71966431 - L1ME LINE L1 -299 5822 5576 2295 94 7 3 chr10 73622949 73623246 -71966042 - AluSx SINE Alu -14 298 1 23 33 0 0 chr10 73623574 73623604 -71965684 + AT_rich Low_complexity Low_complexity 1 30 0 2236 124 0 0 chr10 73624548 73624847 -71964441 + AluSx SINE Alu 1 299 -13 644 321 85 38 chr10 73625061 73625755 -71963533 - L2 LINE L2 0 3272 2551 426 223 36 65 chr10 73625735 73625874 -71963414 - MIR SINE MIR -121 141 7 * 2208 100 0 10 chr10 73625918 73626218 -71963070 - AluY SINE Alu -14 297 1 884 209 0 0 chr10 73626425 73626583 -71962705 - AluJb SINE Alu -18 294 137 381 305 84 46 chr10 73626603 73626970 -71962318 - L2 LINE L2 -905 2409 2029 2046 100 0 72 chr10 73627391 73627711 -71961577 + AluSx SINE Alu 1 297 -15 1532 188 0 21 chr10 73627715 73627997 -71961291 - AluJo SINE Alu -24 288 13 600 171 162 0 chr10 73628019 73628130 -71961158 - FLAM_A SINE Alu -4 129 1 277 346 79 0 chr10 73628253 73628455 -71960833 - L2 LINE L2 -2156 1158 941 293 295 117 39 chr10 73628676 73628957 -71960331 - L2 LINE L2 -2716 598 296 218 333 130 65 chr10 73629095 73629326 -71959962 - L2 LINE L2 -9 3263 3018 363 229 74 69 chr10 73630043 73630070 -71959218 - L1ME4a LINE L1 0 6121 6096 2162 119 3 0 chr10 73630070 73630363 -71958925 + AluSx SINE Alu 1 294 -18 363 229 74 69 chr10 73630363 73630510 -71958778 - L1ME4a LINE L1 -25 6096 5946 1197 153 0 0 chr10 73630635 73630811 -71958477 - AluSg/x SINE Alu -1 311 136 244 296 92 0 chr10 73631344 73631442 -71957846 - L2 LINE L2 -3 3310 3204 2448 83 0 0 chr10 73631507 73631808 -71957480 + AluSx SINE Alu 1 301 -11 2439 65 7 0 chr10 73631889 73632182 -71957106 + AluY SINE Alu 1 295 -16 292 250 109 26 chr10 73632293 73632449 -71956839 - MIR SINE MIR -14 248 80 1957 123 3 46 chr10 73632450 73632752 -71956536 + AluJb SINE Alu 1 289 -23 1946 117 31 14 chr10 73632765 73633055 -71956233 + AluSx SINE Alu 1 295 -17 186 136 34 17 chr10 73633113 73633172 -71956116 + (TA)n Simple_repeat Simple_repeat 1 60 0 771 150 0 23 chr10 73633204 73633337 -71955951 + AluSg/x SINE Alu 156 285 -27 2517 54 0 3 chr10 73634515 73634810 -71954478 + AluSg SINE Alu 1 294 -16 23 0 0 0 chr10 73635774 73635797 -71953491 + AT_rich Low_complexity Low_complexity 1 23 0 248 157 0 0 chr10 73635869 73635920 -71953368 - AluSp/q SINE Alu 0 303 253 836 104 0 0 chr10 73635922 73636028 -71953260 - AluSp SINE Alu -207 106 1 1604 174 13 58 chr10 73636029 73636200 -71953088 - AluJo SINE Alu -16 296 144 2138 103 7 3 chr10 73636200 73636491 -71952797 - AluY SINE Alu -19 292 1 1604 174 13 58 chr10 73636491 73636629 -71952659 - AluJo SINE Alu -168 144 1 473 211 0 0 chr10 73636694 73636784 -71952504 + FRAM SINE Alu 73 162 -14 1913 139 17 0 chr10 73636970 73637258 -71952030 + AluSx SINE Alu 1 293 -19 2214 122 0 3 chr10 73638212 73638516 -71950772 - AluSx SINE Alu -8 304 2 25 0 0 0 chr10 73638526 73638551 -71950737 + AT_rich Low_complexity Low_complexity 1 25 0 744 169 0 0 chr10 73638864 73638988 -71950300 - FLAM_A SINE Alu -9 124 1 1402 180 0 9 chr10 73640145 73640378 -71948910 + AluJo SINE Alu 60 290 -22 992 154 0 19 chr10 73640734 73640890 -71948398 + FRAM SINE Alu 1 152 -24 25 0 0 0 chr10 73641375 73641400 -71947888 + AT_rich Low_complexity Low_complexity 1 25 0 2458 63 3 0 chr10 73641581 73641880 -71947408 + AluY SINE Alu 9 308 -3 1083 101 13 0 chr10 73642138 73642287 -71947001 - AluSg SINE Alu -159 151 1 2246 115 0 6 chr10 73642341 73642653 -71946635 - AluSg SINE Alu 0 310 1 1382 150 24 0 chr10 73643168 73643381 -71945907 - AluSq SINE Alu -95 218 1 1618 143 86 14 chr10 73643807 73644087 -71945201 - AluJb SINE Alu -12 300 1 1523 184 65 4 chr10 73644087 73644365 -71944923 - AluJo SINE Alu -17 295 1 429 285 58 7 chr10 73644369 73644506 -71944782 - L1ME LINE L1 -458 5663 5520 2478 81 0 0 chr10 73645193 73645490 -71943798 - AluSc SINE Alu -12 297 1 990 154 40 84 chr10 73646398 73646560 -71942728 - AluSg/x SINE Alu -10 300 149 2165 134 0 0 chr10 73646560 73646865 -71942423 - AluSx SINE Alu -7 305 1 990 154 40 84 chr10 73646865 73646929 -71942359 - AluSg/x SINE Alu -161 149 84 508 184 39 0 chr10 73647027 73647130 -71942158 - L1MB7 LINE L1 -17 6167 6061 973 81 44 0 chr10 73647138 73647274 -71942014 - L1PA11 LINE L1 0 6174 6033 21 0 0 0 chr10 73647305 73647326 -71941962 + AT_rich Low_complexity Low_complexity 1 21 0 568 195 119 0 chr10 73647326 73647444 -71941844 - FLAM_C SINE Alu -10 133 2 587 183 80 133 chr10 73648615 73648818 -71940470 + MER33 DNA MER1_type 13 196 -2389 2061 128 0 33 chr10 73648818 73649122 -71940166 + AluSx SINE Alu 4 297 -15 587 183 80 133 chr10 73649122 73649219 -71940069 + MER33 DNA MER1_type 196 297 -27 313 184 92 58 chr10 73649957 73650044 -71939244 + MLT1F1 LTR MaLR 45 134 -433 1089 206 344 7 chr10 73650046 73650473 -71938815 + L1MC3 LINE L1 7209 7779 -6 831 127 8 30 chr10 73650745 73650879 -71938409 - FLAM_C SINE Alu -2 131 1 1495 167 98 29 chr10 73651568 73651679 -71937609 + AluJb SINE Alu 1 103 -209 2231 114 3 3 chr10 73651679 73651986 -71937302 + AluSp SINE Alu 1 307 -6 1495 167 98 29 chr10 73651986 73652149 -71937139 + AluJb SINE Alu 103 294 -18 194 170 0 21 chr10 73652149 73652196 -71937092 + GA-rich Low_complexity Low_complexity 2 47 0 2452 71 0 7 chr10 73652204 73652501 -71936787 - AluY SINE Alu -16 295 1 533 170 259 30 chr10 73652854 73652989 -71936299 - FRAM SINE Alu 0 166 1 251 252 181 19 chr10 73653080 73653235 -71936053 - L1ME LINE L1 -297 5824 5645 1695 153 10 49 chr10 73653740 73654048 -71935240 + AluJo SINE Alu 1 296 -16 747 159 35 80 chr10 73654086 73654312 -71934976 + L1MB7 LINE L1 5943 6158 -26 980 173 39 0 chr10 73654421 73654600 -71934688 - L1MD2 LINE L1 -6 6353 6168 285 294 81 6 chr10 73654986 73655146 -71934142 + L2 LINE L2 2153 2324 -990 760 192 105 11 chr10 73655311 73655611 -71933677 - Charlie1 DNA MER1_type -4 2757 19 2322 92 3 0 chr10 73655873 73656165 -71933123 + AluSp SINE Alu 1 293 -20 941 210 242 28 chr10 73656639 73656887 -71932401 + AluJo SINE Alu 1 301 -1 396 295 43 7 chr10 73657029 73657168 -71932120 + MIR SINE MIR 8 151 -111 291 54 0 0 chr10 73657766 73657803 -71931485 + (TG)n Simple_repeat Simple_repeat 2 38 0 2047 93 29 7 chr10 73657803 73658082 -71931206 - AluSx SINE Alu -27 285 1 195 42 0 0 chr10 73659613 73659637 -71929651 + (A)n Simple_repeat Simple_repeat 1 24 0 26 0 0 0 chr10 73661021 73661047 -71928241 + AT_rich Low_complexity Low_complexity 1 26 0 381 297 91 6 chr10 73661212 73661387 -71927901 - L1ME LINE L1 -301 5820 5631 1320 196 4 0 chr10 73661387 73661612 -71927676 - AluJo SINE Alu -86 226 1 901 217 0 0 chr10 73661707 73661868 -71927420 - AluJo SINE Alu -5 297 137 1365 80 0 0 chr10 73661897 73662060 -71927228 + AluY SINE Alu 128 290 -21 270 133 0 22 chr10 73662062 73662107 -71927181 - AluJo SINE Alu -175 127 84 271 211 84 0 chr10 73662112 73662183 -71927105 + L2 LINE L2 3221 3297 -16 1863 148 3 41 chr10 73662198 73662516 -71926772 - AluJo SINE Alu -6 306 1 1829 108 111 38 chr10 73662696 73662984 -71926304 + AluSx SINE Alu 1 309 -3 555 135 167 0 chr10 73663005 73663101 -71926187 + FLAM_C SINE Alu 25 136 -7 394 256 94 30 chr10 73663181 73663384 -71925904 - L2 LINE L2 -924 2390 2175 257 270 129 43 chr10 73663435 73663598 -71925690 - MIR SINE MIR -66 196 20 1258 51 0 6 chr10 73663883 73664041 -71925247 - L1PA8 LINE L1 0 6172 6016 961 151 101 46 chr10 73664069 73664287 -71925001 - AluJo SINE Alu -82 230 1 1753 174 3 7 chr10 73665603 73665913 -71923375 - AluJo SINE Alu -3 309 1 1380 165 67 32 chr10 73666162 73666280 -71923008 + AluJo SINE Alu 1 113 -199 207 0 0 0 chr10 73666280 73666303 -71922985 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 1380 165 67 32 chr10 73666303 73666469 -71922819 + AluJo SINE Alu 113 295 -17 875 129 0 0 chr10 73666623 73666747 -71922541 + AluJb SINE Alu 180 303 -9 29 28 0 0 chr10 73666810 73666846 -71922442 + AT_rich Low_complexity Low_complexity 1 36 0 795 179 7 40 chr10 73666904 73667055 -71922233 + AluJb SINE Alu 2 147 -165 1734 189 3 3 chr10 73667902 73668208 -71921080 - AluJb SINE Alu -6 306 1 825 144 0 65 chr10 73669515 73669668 -71919620 - FLAM_C SINE Alu 0 143 1 1085 164 18 0 chr10 73669943 73670114 -71919174 + AluJb SINE Alu 123 296 -16 275 280 10 20 chr10 73670149 73670249 -71919039 + (TA)n Simple_repeat Simple_repeat 1 99 0 752 182 13 25 chr10 73670593 73670752 -71918536 - L1MA10 LINE L1 -9 6325 6169 684 160 0 0 chr10 73670821 73670927 -71918361 - FLAM_A SINE Alu -12 130 25 1762 143 64 4 chr10 73670935 73671215 -71918073 - AluJb SINE Alu -15 297 1 261 157 14 57 chr10 73671219 73671289 -71917999 - L1ME2 LINE L1 -229 5935 5869 1172 220 131 0 chr10 73671299 73671635 -71917653 - L1M4 LINE L1 -2231 3915 3536 2219 119 0 0 chr10 73671790 73672084 -71917204 + AluSx SINE Alu 1 294 -18 21 0 0 0 chr10 73672168 73672189 -71917099 + AT_rich Low_complexity Low_complexity 1 21 0 2196 107 14 0 chr10 73672193 73672483 -71916805 + AluSq SINE Alu 1 294 -19 2373 105 0 0 chr10 73672485 73672790 -71916498 + AluSx SINE Alu 1 305 -7 741 129 89 32 chr10 73672796 73672920 -71916368 + FLAM_C SINE Alu 1 131 -2 1449 163 110 83 chr10 73673193 73673556 -71915732 + MSTA LTR MaLR 1 426 -2 983 99 141 0 chr10 73673882 73674024 -71915264 + MSTA LTR MaLR 267 428 0 717 122 0 0 chr10 73674066 73674164 -71915124 - AluSg SINE Alu -211 99 2 1223 190 62 68 chr10 73674177 73674530 -71914758 - Charlie4a DNA MER1_type -157 351 1 278 146 0 18 chr10 73674642 73674686 -71914602 + (TA)n Simple_repeat Simple_repeat 1 45 -9 2367 94 0 16 chr10 73674686 73674995 -71914293 - AluSx SINE Alu -8 304 1 278 146 0 18 chr10 73674995 73675005 -71914283 + (TA)n Simple_repeat Simple_repeat 45 54 0 2119 144 0 0 chr10 73675006 73675312 -71913976 - AluSx SINE Alu -6 306 1 1007 232 87 88 chr10 73675418 73675678 -71913610 - MLT1F1 LTR MaLR -107 460 205 2554 70 0 0 chr10 73675678 73675980 -71913308 + AluY SINE Alu 1 302 -9 1007 232 87 88 chr10 73675980 73676185 -71913103 - MLT1F1 LTR MaLR -362 205 1 756 200 53 58 chr10 73676820 73677010 -71912278 - MER5A DNA MER1_type 0 189 1 2165 113 17 0 chr10 73677387 73677678 -71911610 + AluSx SINE Alu 1 296 -16 1747 147 15 0 chr10 73677820 73678079 -71911209 + AluJo SINE Alu 19 281 -31 2102 112 7 3 chr10 73678079 73678363 -71910925 - AluSx SINE Alu -16 296 11 469 165 12 12 chr10 73678470 73678555 -71910733 - AluS SINE Alu -227 86 2 1557 177 3 51 chr10 73678703 73679019 -71910269 + AluJo SINE Alu 1 301 -11 818 174 0 0 chr10 73679026 73679158 -71910130 + FLAM_C SINE Alu 2 133 0 487 188 152 0 chr10 73679682 73679794 -71909494 - MIR SINE MIR -45 217 89 21 36 0 0 chr10 73679867 73679895 -71909393 + AT_rich Low_complexity Low_complexity 1 28 0 2387 89 0 3 chr10 73680038 73680341 -71908947 + AluSc SINE Alu 1 302 -7 831 163 0 8 chr10 73680349 73680478 -71908810 + FLAM_C SINE Alu 1 128 -5 1844 146 13 38 chr10 73680682 73680998 -71908290 + AluJb SINE Alu 4 311 -1 339 283 119 31 chr10 73681299 73681496 -71907792 + MIR SINE MIR 11 232 -30 2267 97 10 0 chr10 73681496 73681786 -71907502 + AluSg SINE Alu 3 295 -15 339 283 119 31 chr10 73681786 73681814 -71907474 + MIR SINE MIR 232 256 -6 777 156 9 15 chr10 73684238 73684485 -71904803 + AluJo SINE Alu 2 296 -16 306 0 0 0 chr10 73684485 73684519 -71904769 + (TA)n Simple_repeat Simple_repeat 2 35 0 1709 206 88 49 chr10 73685055 73685320 -71903968 - L1MD3 LINE L1 -1 8041 7788 665 136 76 68 chr10 73685320 73685452 -71903836 + FLAM_C SINE Alu 1 133 0 1709 206 88 49 chr10 73685452 73685778 -71903510 - L1MD3 LINE L1 -254 7788 7443 464 284 101 6 chr10 73686287 73686456 -71902832 + L1ME LINE L1 5517 5701 -420 246 243 74 40 chr10 73686642 73686790 -71902498 + L1ME LINE L1 5713 5865 -256 678 101 11 0 chr10 73687277 73687392 -71901896 + AluSg/x SINE Alu 191 306 0 191 321 0 0 chr10 73687392 73687448 -71901840 + L2 LINE L2 2996 3051 -221 1695 159 39 3 chr10 73687492 73687775 -71901513 - AluJb SINE Alu -14 298 6 2220 114 13 0 chr10 73687780 73688086 -71901202 - AluSx SINE Alu -2 310 1 810 262 63 4 chr10 73688212 73688449 -71900839 + MIR SINE MIR 11 261 -1 21 82 0 0 chr10 73688573 73688622 -71900666 + AT_rich Low_complexity Low_complexity 1 49 0 1859 126 161 64 chr10 73688664 73688705 -71900583 - MSTA LTR MaLR 0 428 392 1821 149 0 4 chr10 73688705 73688974 -71900314 + AluSq SINE Alu 1 268 -45 1859 126 161 64 chr10 73688974 73689322 -71899966 - MSTA LTR MaLR -36 392 1 1798 150 14 3 chr10 73689856 73690142 -71899146 - AluJb SINE Alu -19 293 5 237 309 93 21 chr10 73690238 73690335 -71898953 - L2 LINE L2 -4 3309 3206 253 332 80 34 chr10 73690396 73690678 -71898610 - L2 LINE L2 -235 3037 2737 2026 108 0 4 chr10 73691012 73691289 -71897999 - AluSg SINE Alu -6 304 29 2403 72 0 0 chr10 73693248 73693539 -71895749 + AluY SINE Alu 1 291 -20 1848 145 31 7 chr10 73693549 73693838 -71895450 + AluJb SINE Alu 1 296 -16 223 209 0 0 chr10 73693839 73693882 -71895406 - L2 LINE L2 -4 3309 3267 614 271 153 68 chr10 73694250 73694443 -71894845 - L2 LINE L2 0 3313 3138 2311 100 0 3 chr10 73694443 73694742 -71894546 - AluSx SINE Alu -14 298 1 614 271 153 68 chr10 73694742 73695096 -71894192 - L2 LINE L2 -175 3138 2815 2079 82 92 0 chr10 73695096 73695378 -71893910 - AluY SINE Alu -3 308 1 614 271 153 68 chr10 73695378 73695620 -71893668 - L2 LINE L2 -498 2815 2465 2084 115 3 14 chr10 73696068 73696388 -71892900 + AluSx SINE Alu 1 312 0 902 178 0 96 chr10 73696592 73696690 -71892598 + AluJb SINE Alu 134 205 -107 2303 78 20 7 chr10 73696690 73696983 -71892305 + AluSg SINE Alu 1 297 -13 902 178 0 96 chr10 73696983 73697081 -71892207 + AluJb SINE Alu 205 311 -1 1929 113 7 48 chr10 73697086 73697230 -71892058 + AluSg SINE Alu 1 149 -169 2569 51 0 0 chr10 73697230 73697526 -71891762 + AluY SINE Alu 1 296 -15 1929 113 7 48 chr10 73697526 73697711 -71891577 + AluSg SINE Alu 149 318 0 802 178 8 16 chr10 73697722 73697851 -71891437 + FLAM_A SINE Alu 1 128 -5 2197 120 0 0 chr10 73697915 73698206 -71891082 - AluSx SINE Alu -21 291 1 2143 104 10 10 chr10 73698441 73698748 -71890540 + AluSx SINE Alu 1 307 -5 201 108 0 0 chr10 73700016 73700053 -71889235 + (TG)n Simple_repeat Simple_repeat 2 38 0 1393 108 4 73 chr10 73700165 73700422 -71888866 - AluSg/x SINE Alu 0 312 87 317 43 0 43 chr10 73700430 73700477 -71888811 - AluSc SINE Alu -168 131 87 928 112 8 15 chr10 73700480 73700614 -71888674 - AluSq/x SINE Alu -180 133 1 601 170 82 19 chr10 73701229 73701388 -71887900 - Charlie1 DNA MER1_type -23 2738 2570 2017 124 0 3 chr10 73701389 73701671 -71887617 - AluSx SINE Alu -18 294 14 670 237 56 25 chr10 73701701 73701899 -71887389 - MIR SINE MIR -8 254 51 28 22 0 22 chr10 73702145 73702169 -71887119 + AT_rich Low_complexity Low_complexity 1 25 -20 2031 141 7 0 chr10 73702169 73702467 -71886821 + AluSx SINE Alu 1 300 -12 28 22 0 22 chr10 73702467 73702488 -71886800 + AT_rich Low_complexity Low_complexity 25 45 0 184 137 39 0 chr10 73702499 73702550 -71886738 + (TA)n Simple_repeat Simple_repeat 1 53 0 855 128 0 8 chr10 73702550 73702675 -71886613 - FLAM_C SINE Alu -6 137 14 651 162 0 0 chr10 73702915 73703014 -71886274 + AluJb SINE Alu 199 297 -15 928 114 38 8 chr10 73703034 73703166 -71886122 + AluJo SINE Alu 1 136 -176 2260 113 0 3 chr10 73703360 73703671 -71885617 - AluSx SINE Alu -2 310 1 2074 138 14 0 chr10 73704344 73704633 -71884655 - AluSx SINE Alu -19 293 1 1555 174 3 51 chr10 73704780 73705096 -71884192 + AluJo SINE Alu 1 301 -11 856 182 0 0 chr10 73705103 73705235 -71884053 + FLAM_C SINE Alu 2 133 0 487 188 152 0 chr10 73705760 73705872 -71883416 - MIR SINE MIR -45 217 89 21 36 0 0 chr10 73705945 73705973 -71883315 + AT_rich Low_complexity Low_complexity 1 28 0 2408 86 0 3 chr10 73706116 73706420 -71882868 + AluSc SINE Alu 1 303 -6 831 163 0 8 chr10 73706428 73706557 -71882731 + FLAM_C SINE Alu 1 128 -5 1842 146 13 38 chr10 73706762 73707078 -71882210 + AluJb SINE Alu 4 311 -1 352 288 159 6 chr10 73707379 73707549 -71881739 + MIR SINE MIR 11 206 -56 2131 127 0 3 chr10 73707576 73707867 -71881421 + AluSg SINE Alu 3 292 -18 501 110 0 0 chr10 73707867 73707949 -71881339 + (TA)n Simple_repeat Simple_repeat 2 83 0 1637 216 51 37 chr10 73707949 73708462 -71880826 - L1M4 LINE L1 -1270 4876 4357 940 129 0 0 chr10 73708463 73708595 -71880693 + FLAM_C SINE Alu 1 132 -11 701 235 6 0 chr10 73708693 73708876 -71880412 - HAL1 LINE L1 -1217 1290 1107 1989 189 124 37 chr10 73708902 73709363 -71879925 + MLT1F LTR MaLR 1 501 -41 1285 109 34 0 chr10 73709386 73709561 -71879727 - AluSq SINE Alu -27 286 106 1408 138 9 18 chr10 73710452 73710670 -71878618 - AluSx SINE Alu -61 251 36 253 323 47 24 chr10 73710677 73710804 -71878484 - MIR SINE MIR -110 152 23 2146 271 104 17 chr10 73710811 73711847 -71877441 + L2 LINE L2 2188 3313 0 475 315 71 15 chr10 73712003 73712200 -71877088 - MIR SINE MIR -6 256 49 325 371 115 24 chr10 73712355 73712730 -71876558 + L2 LINE L2 2852 3260 -12 479 253 133 6 chr10 73712886 73713052 -71876236 + MIR SINE MIR 5 191 -71 16828 126 62 14 chr10 73713927 73715979 -71873309 - Tigger2 DNA MER2_type 0 2718 766 2250 94 0 31 chr10 73715979 73716298 -71872990 + AluY SINE Alu 1 309 -2 16828 126 62 14 chr10 73716298 73716704 -71872584 - Tigger2 DNA MER2_type -1952 766 127 2372 81 0 3 chr10 73716704 73717011 -71872277 + AluSc SINE Alu 1 306 -3 16828 126 62 14 chr10 73717011 73717145 -71872143 - Tigger2 DNA MER2_type -2591 127 1 872 270 133 32 chr10 73717206 73717924 -71871364 - L2 LINE L2 -48 3265 2403 2343 70 0 0 chr10 73718668 73718983 -71870305 + AluY SINE Alu 1 315 0 535 241 99 6 chr10 73719001 73719176 -71870112 - L1ME4a LINE L1 -207 5914 5725 209 345 60 0 chr10 73719689 73719773 -71869515 - L2 LINE L2 -5 3267 3179 2169 99 28 0 chr10 73719906 73720190 -71869098 - AluSx SINE Alu -17 295 4 236 311 160 0 chr10 73720854 73720960 -71868328 + L3 LINE CR1 405 527 -1050 180 0 0 0 chr10 73721225 73721245 -71868043 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 2010 119 0 4 chr10 73721257 73721534 -71867754 - AluSx SINE Alu -11 301 26 358 348 14 7 chr10 73721535 73721673 -71867615 - MIR SINE MIR -116 146 8 3117 93 29 27 chr10 73721851 73722294 -71866994 - MLT2A1 LTR ERVL 0 444 1 2277 86 13 16 chr10 73722408 73722721 -71866567 + AluSp SINE Alu 1 312 -1 237 328 92 8 chr10 73722991 73723122 -71866166 + L3 LINE CR1 572 713 -864 4243 106 23 5 chr10 73724783 73725397 -71863891 + L1MA2 LINE L1 5679 6303 -1 1712 177 0 40 chr10 73725744 73726044 -71863244 + AluJb SINE Alu 1 288 -24 26 64 0 0 chr10 73726680 73726727 -71862561 + AT_rich Low_complexity Low_complexity 1 47 0 2280 108 0 0 chr10 73726779 73727074 -71862214 + AluSx SINE Alu 1 295 -17 1684 174 18 103 chr10 73727985 73728382 -71860906 - MLT1A2 LTR MaLR -11 363 1 204 207 0 35 chr10 73729187 73729245 -71860043 + T-rich Low_complexity Low_complexity 4 59 0 1801 174 0 0 chr10 73729482 73729786 -71859502 + AluJb SINE Alu 1 304 0 313 282 124 25 chr10 73731056 73731258 -71858030 - MIR SINE MIR -8 254 33 2477 62 0 3 chr10 73731260 73731564 -71857724 - AluY SINE Alu -8 303 1 777 304 171 5 chr10 73731720 73732148 -71857140 + L2 LINE L2 2581 3068 -204 296 268 179 0 chr10 73732334 73732446 -71856842 + L2 LINE L2 3181 3312 -1 3474 164 21 18 chr10 73732472 73732534 -71856754 - L1MB7 LINE L1 -10 6174 6114 2348 91 0 16 chr10 73732534 73732842 -71856446 + AluSg SINE Alu 1 303 -7 3474 164 21 18 chr10 73732842 73733390 -71855898 - L1MB7 LINE L1 -70 6114 5562 1180 208 118 65 chr10 73733399 73733839 -71855449 - MER31B LTR ERV1 -5 538 1 287 288 153 17 chr10 73736264 73736441 -71852847 + MIR3 SINE MIR 7 207 -1 1121 117 0 83 chr10 73736459 73736585 -71852703 + L1MB2 LINE L1 5968 6072 -99 2393 56 7 10 chr10 73736585 73736889 -71852399 - AluY SINE Alu -8 303 1 1121 117 0 83 chr10 73736889 73736967 -71852321 + L1MB2 LINE L1 6072 6155 -16 2359 51 0 14 chr10 73737004 73737296 -71851992 + AluY SINE Alu 21 308 -3 273 213 113 57 chr10 73737312 73737453 -71851835 - MER103 DNA DNA 0 166 18 811 260 65 4 chr10 73739609 73739840 -71849448 + MIR SINE MIR 13 257 -5 2257 117 0 0 chr10 73740155 73740455 -71848833 + AluSx SINE Alu 1 300 -12 2347 158 61 18 chr10 73741839 73742281 -71847007 + LOR1b LTR ERV1 1 461 0 1823 186 100 134 chr10 73742479 73743445 -71845843 - LTR1B LTR ERV1 0 1020 1 430 81 0 0 chr10 73743882 73743944 -71845344 - Alu SINE Alu -4 308 247 274 264 126 11 chr10 73744070 73744157 -71845131 - MIR3 SINE MIR -21 187 91 1694 180 3 71 chr10 73745059 73745425 -71843863 - MER2 DNA MER2_type -2 342 2 2357 23 0 0 chr10 73746013 73746273 -71843015 - AluYa5 SINE Alu -1 310 51 483 231 132 58 chr10 73746340 73746635 -71842653 - L1ME4a LINE L1 -166 5955 5639 21 36 0 0 chr10 73747126 73747154 -71842134 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr10 73747502 73747530 -71841758 + AT_rich Low_complexity Low_complexity 1 28 0 237 128 0 0 chr10 73747910 73747957 -71841331 + (GA)n Simple_repeat Simple_repeat 1 47 0 1259 190 35 64 chr10 73747959 73748301 -71840987 - MLT2C1 LTR ERVL -65 332 1 350 286 102 0 chr10 73748445 73748592 -71840696 + MARNA DNA Mariner 323 484 -102 1169 202 32 5 chr10 73748735 73748953 -71840335 - MER58A DNA MER1_type 0 224 1 1143 136 0 0 chr10 73749081 73749273 -71840015 - AluSq SINE Alu 0 322 131 2035 114 19 19 chr10 73749295 73749602 -71839686 - AluSq SINE Alu -6 307 1 202 258 13 13 chr10 73750153 73750228 -71839060 + MIR SINE MIR 62 137 -71 216 333 46 20 chr10 73750279 73750432 -71838856 - L2 LINE L2 -606 2708 2552 515 282 97 29 chr10 73750528 73750734 -71838554 + MIR SINE MIR 7 226 -36 31 0 0 0 chr10 73751952 73751983 -71837305 + AT_rich Low_complexity Low_complexity 1 31 0 234 191 0 0 chr10 73752046 73752093 -71837195 + C-rich Low_complexity Low_complexity 5 51 0 184 330 71 9 chr10 73753688 73753800 -71835488 + L2 LINE L2 1758 1876 -1438 429 312 38 64 chr10 73755217 73755374 -71833914 + L2 LINE L2 3113 3265 -7 225 0 0 0 chr10 73755523 73755548 -71833740 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 2600 65 0 0 chr10 73755603 73755913 -71833375 - AluSg SINE Alu 0 310 1 345 24 0 0 chr10 73756280 73756322 -71832966 + (CA)n Simple_repeat Simple_repeat 2 43 0 28 0 0 0 chr10 73756730 73756758 -71832530 + AT_rich Low_complexity Low_complexity 1 28 0 1347 207 143 30 chr10 73757754 73758082 -71831206 - MLT1E LTR MaLR -1 592 259 345 183 12 85 chr10 73758106 73758188 -71831100 - MLT1E LTR MaLR -470 123 48 1394 38 0 0 chr10 73758191 73758351 -71830937 + AluY SINE Alu 151 310 -1 273 146 0 0 chr10 73759328 73759369 -71829919 + L2 LINE L2 3216 3256 -16 2158 117 3 7 chr10 73759463 73759772 -71829516 + AluSg SINE Alu 1 308 -2 180 394 32 0 chr10 73759819 73759913 -71829375 - MIR SINE MIR -43 219 123 418 340 76 28 chr10 73760389 73760639 -71828649 + L2 LINE L2 2979 3240 -32 216 269 26 13 chr10 73760858 73760936 -71828352 - L3b LINE CR1 -356 1227 1149 2371 100 3 0 chr10 73761830 73762141 -71827147 + AluSx SINE Alu 1 312 0 26 50 0 0 chr10 73763006 73763046 -71826242 + AT_rich Low_complexity Low_complexity 1 40 0 2272 95 10 3 chr10 73763371 73763667 -71825621 - AluSq SINE Alu -15 298 1 426 35 0 69 chr10 73763866 73763953 -71825335 + (TA)n Simple_repeat Simple_repeat 1 81 0 347 329 78 73 chr10 73764257 73764679 -71824609 + L2 LINE L2 2848 3271 -1 458 92 15 0 chr10 73765022 73765087 -71824201 + MER41A LTR ERV1 399 464 -90 297 0 0 0 chr10 73765087 73765120 -71824168 + (A)n Simple_repeat Simple_repeat 1 33 0 267 63 0 0 chr10 73765255 73765296 -71823992 + MADE1 DNA Mariner 46 80 0 25 51 0 0 chr10 73765337 73765376 -71823912 + AT_rich Low_complexity Low_complexity 1 39 0 234 239 14 14 chr10 73765933 73766004 -71823284 + L1ME4a LINE L1 5942 6012 -109 2168 113 3 10 chr10 73766234 73766534 -71822754 + AluSx SINE Alu 1 298 -14 4574 84 12 2 chr10 73767276 73767873 -71821415 - HERVL LTR ERVL -5049 605 3 22 0 0 0 chr10 73768625 73768647 -71820641 + AT_rich Low_complexity Low_complexity 1 22 0 7051 135 15 17 chr10 73768819 73770083 -71819205 + L1M1 LINE L1 4182 5440 -743 643 159 65 0 chr10 73770083 73770190 -71819098 - AluJo SINE Alu -73 239 126 2172 111 3 0 chr10 73770208 73770506 -71818782 + AluSx SINE Alu 6 304 -8 1895 126 20 3 chr10 73770513 73770807 -71818481 + L1M1 LINE L1 5490 5788 -512 739 175 48 36 chr10 73770807 73770973 -71818315 - LTR49 LTR ERV1 0 595 428 2176 121 7 10 chr10 73771231 73771537 -71817751 + AluSx SINE Alu 1 305 -7 470 240 29 76 chr10 73771643 73771814 -71817474 - MIR SINE MIR -61 201 39 314 292 50 17 chr10 73772099 73772219 -71817069 + L2 LINE L2 3148 3271 -1 1962 111 7 24 chr10 73772552 73772840 -71816448 - AluSx SINE Alu -17 295 13 2146 164 67 5 chr10 73773074 73773464 -71815824 - MLT2D LTR ERVL 0 414 1 2062 120 31 0 chr10 73774221 73774512 -71814776 + AluSx SINE Alu 1 300 -12 2060 139 13 7 chr10 73774995 73775296 -71813992 + AluJo SINE Alu 1 303 -9 1410 107 38 86 chr10 73775489 73775616 -71813672 + AluJo SINE Alu 13 145 -167 2283 100 0 0 chr10 73775616 73775915 -71813373 + AluSx SINE Alu 1 299 -13 1410 107 38 86 chr10 73775915 73776077 -71813211 + AluJo SINE Alu 145 288 -24 242 193 227 11 chr10 73776083 73776171 -71813117 - L2 LINE L2 -14 3299 3193 202 285 163 12 chr10 73776209 73776381 -71812907 + L2 LINE L2 2230 2427 -887 545 260 179 0 chr10 73776428 73776601 -71812687 - MIR SINE MIR -12 250 47 1661 167 83 92 chr10 73776616 73776876 -71812412 + Charlie1b DNA MER1_type 1 262 -2499 2254 89 0 0 chr10 73776876 73777267 -71812021 + AluSg SINE Alu 1 391 0 1661 167 83 92 chr10 73777267 73777328 -71811960 + Charlie1b DNA MER1_type 262 322 -2439 2063 122 34 0 chr10 73777328 73777622 -71811666 + AluSx SINE Alu 1 304 -8 1661 167 83 92 chr10 73777622 73777703 -71811585 + Charlie1b DNA MER1_type 322 402 -2359 1912 159 0 10 chr10 73777703 73778017 -71811271 + AluJo SINE Alu 1 311 -1 1661 167 83 92 chr10 73778017 73778102 -71811186 + Charlie1b DNA MER1_type 402 487 -36 828 163 0 0 chr10 73778110 73778233 -71811055 - FLAM_C SINE Alu -20 123 1 350 167 0 0 chr10 73778242 73778296 -71810992 + Charlie1b DNA MER1_type 470 523 0 1000 234 115 29 chr10 73778479 73778791 -71810497 - MLT1K LTR MaLR -2 586 248 652 138 0 73 chr10 73778816 73778867 -71810421 - L1MB3 LINE L1 -2 6181 6128 2142 128 0 0 chr10 73778867 73779163 -71810125 - AluJb SINE Alu -16 296 1 652 138 0 73 chr10 73779163 73779234 -71810054 - L1MB3 LINE L1 -55 6128 6068 880 266 95 43 chr10 73779236 73779605 -71809683 + MLT1K LTR MaLR 44 431 -157 204 125 0 0 chr10 73779638 73779670 -71809618 + (TTTTC)n Simple_repeat Simple_repeat 2 33 0 1721 178 36 128 chr10 73779699 73779852 -71809436 + MLT1D LTR MaLR 1 166 -339 2163 89 43 0 chr10 73779852 73780132 -71809156 - AluY SINE Alu -19 292 1 1721 178 36 128 chr10 73780132 73780534 -71808754 + MLT1D LTR MaLR 166 505 0 1193 186 0 18 chr10 73780693 73780913 -71808375 - AluJb SINE Alu -96 216 1 1975 115 38 3 chr10 73781217 73781505 -71807783 - AluSx SINE Alu -14 298 1 317 259 56 37 chr10 73781548 73781656 -71807632 + HAL1 LINE L1 1823 1932 -575 1816 163 0 10 chr10 73781789 73782077 -71807211 + AluJo SINE Alu 1 285 -27 1155 123 0 0 chr10 73782216 73782378 -71806910 - AluY SINE Alu -17 294 133 293 278 76 21 chr10 73782391 73782535 -71806753 + HAL1b LINE L1 746 897 -451 294 248 112 77 chr10 73782599 73782922 -71806366 + HAL1 LINE L1 2143 2476 -31 1827 101 12 4 chr10 73782928 73783185 -71806103 - AluSx SINE Alu -15 297 39 288 152 0 7 chr10 73783321 73783374 -71805914 - AluSp SINE Alu -133 170 128 2119 126 0 0 chr10 73783404 73783689 -71805599 + AluY SINE Alu 1 285 -26 34 55 0 0 chr10 73783689 73783744 -71805544 + AT_rich Low_complexity Low_complexity 1 55 0 470 194 41 10 chr10 73783906 73784004 -71805284 + FLAM_A SINE Alu 23 123 -19 1971 162 3 3 chr10 73784060 73784369 -71804919 + AluJb SINE Alu 1 309 -3 2313 115 0 7 chr10 73784563 73784868 -71804420 + AluSq SINE Alu 1 303 -10 1923 160 6 6 chr10 73785131 73785443 -71803845 + AluSx SINE Alu 1 312 0 5001 83 14 5 chr10 73785624 73786278 -71803010 + PABL_A LTR ERV1 1 660 0 535 275 33 16 chr10 73786824 73787006 -71802282 - MER5A DNA MER1_type -4 185 1 2402 93 0 0 chr10 73787284 73787585 -71801703 - AluSx SINE Alu -7 305 5 1905 151 14 7 chr10 73787852 73788143 -71801145 + AluSx SINE Alu 1 293 -19 940 138 0 7 chr10 73788817 73788955 -71800333 + FLAM_C SINE Alu 1 137 -6 225 157 39 0 chr10 73788955 73789006 -71800282 + (TA)n Simple_repeat Simple_repeat 1 53 0 28 22 0 22 chr10 73789017 73789038 -71800250 + AT_rich Low_complexity Low_complexity 1 21 -24 1978 145 10 0 chr10 73789038 73789335 -71799953 - AluSx SINE Alu -12 300 1 28 22 0 22 chr10 73789335 73789359 -71799929 + AT_rich Low_complexity Low_complexity 21 45 0 610 234 52 26 chr10 73789605 73789797 -71799491 + MIR SINE MIR 51 247 -15 2031 124 0 3 chr10 73789833 73790115 -71799173 + AluSx SINE Alu 14 294 -18 581 170 82 19 chr10 73790116 73790275 -71799013 + Charlie1 DNA MER1_type 2570 2738 -23 937 112 8 15 chr10 73790890 73791024 -71798264 + AluSq/x SINE Alu 1 133 -179 316 43 0 43 chr10 73791027 73791074 -71798214 + AluSc SINE Alu 87 131 -168 1392 107 4 81 chr10 73791082 73791341 -71797947 + AluSg/x SINE Alu 87 312 0 201 108 0 0 chr10 73791453 73791490 -71797798 + (CA)n Simple_repeat Simple_repeat 2 38 0 2154 108 10 10 chr10 73792758 73793065 -71796223 - AluSx SINE Alu -5 307 1 1438 169 15 26 chr10 73793300 73793572 -71795716 + AluSx SINE Alu 1 269 -43 1285 109 5 91 chr10 73793950 73794160 -71795128 - AluSg SINE Alu -118 192 1 802 186 0 0 chr10 73794230 73794375 -71794913 + MLT2B3 LTR ERVL 1 145 -409 887 161 121 11 chr10 73794387 73794561 -71794727 + MLT2B2 LTR ERVL 323 515 0 2008 111 26 46 chr10 73794702 73795008 -71794280 + AluSx SINE Alu 1 300 -12 1646 300 40 13 chr10 73795018 73795743 -71793545 - HERV16 LTR ERVL -3546 1450 686 2390 104 0 7 chr10 73795795 73796102 -71793186 - AluSq SINE Alu -8 305 1 1933 168 3 3 chr10 73796296 73796605 -71792683 - AluJb SINE Alu -3 309 1 470 194 41 10 chr10 73796661 73796759 -71792529 - FLAM_A SINE Alu -19 123 23 34 55 0 0 chr10 73796921 73796976 -71792312 + AT_rich Low_complexity Low_complexity 1 55 0 2093 123 0 0 chr10 73796976 73797261 -71792027 - AluY SINE Alu -26 285 1 760 126 0 59 chr10 73797693 73797828 -71791460 + FLAM_C SINE Alu 1 127 -6 198 206 0 59 chr10 73797920 73797988 -71791300 - MIR SINE MIR -37 225 162 307 295 160 6 chr10 73798826 73798982 -71790306 + MIR SINE MIR 66 245 -17 348 252 104 9 chr10 73799013 73799128 -71790160 + MIR SINE MIR 78 203 -59 2008 129 39 0 chr10 73799129 73799415 -71789873 + AluSx SINE Alu 1 297 -15 1224 271 29 3 chr10 73799694 73800008 -71789280 - LTR16A LTR ERVL -8 442 121 3200 322 58 28 chr10 73800210 73800745 -71788543 - HERVL LTR ERVL -310 5344 4827 671 190 7 44 chr10 73800745 73800882 -71788406 - FLAM_A SINE Alu -1 132 1 3200 322 58 28 chr10 73800882 73802075 -71787213 - HERVL LTR ERVL -827 4827 3564 195 42 0 0 chr10 73802269 73802293 -71786995 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 1900 144 7 0 chr10 73802295 73802573 -71786715 - AluJb SINE Alu -32 280 1 869 128 0 0 chr10 73802596 73802713 -71786575 - FLAM_C SINE Alu -16 117 1 351 350 32 19 chr10 73802728 73802845 -71786443 - HERVL LTR ERVL -3164 2600 2479 1841 197 14 57 chr10 73802845 73802904 -71786384 - MER47B DNA MER2_type -1905 418 358 2119 110 11 0 chr10 73802904 73803214 -71786074 - AluSx SINE Alu 0 313 1 1841 197 14 57 chr10 73803214 73803590 -71785698 - MER47B DNA MER2_type -1965 358 1 351 350 32 19 chr10 73803590 73803629 -71785659 - HERVL LTR ERVL -3285 2479 2442 1211 145 0 5 chr10 73803709 73803909 -71785379 - AluSg/x SINE Alu -1 308 110 198 267 0 117 chr10 73804197 73804317 -71784971 - MIR SINE MIR -19 243 138 854 126 0 8 chr10 73804327 73804446 -71784842 - FLAM_C SINE Alu -25 118 1 452 250 78 0 chr10 73804446 73804574 -71784714 - MIR SINE MIR -111 151 14 273 57 0 0 chr10 73804648 73804683 -71784605 + (TAAA)n Simple_repeat Simple_repeat 1 35 0 280 339 24 24 chr10 73804783 73804948 -71784340 - L3b LINE CR1 -142 1441 1277 2174 132 3 3 chr10 73805458 73805769 -71783519 + AluSq SINE Alu 1 311 -2 1876 153 0 7 chr10 73805769 73806087 -71783201 + AluJb SINE Alu 3 318 0 216 318 45 32 chr10 73806113 73806267 -71783021 - L2 LINE L2 -219 3094 2939 229 347 41 0 chr10 73806483 73806581 -71782707 + MIR3 SINE MIR 53 154 -54 806 140 5 145 chr10 73806774 73806967 -71782321 + FRAM SINE Alu 1 166 0 1496 148 9 0 chr10 73807696 73807919 -71781369 + AluJo SINE Alu 1 225 -87 735 126 9 9 chr10 73807920 73808031 -71781257 + AluJo/FRAM SINE Alu 182 292 -20 1383 169 76 3 chr10 73808067 73808369 -71780919 - MER33 DNA MER1_type 0 324 1 1778 175 14 3 chr10 73808510 73808802 -71780486 + AluSx SINE Alu 1 295 -17 454 80 173 0 chr10 73808999 73809074 -71780214 + L1MA8 LINE L1 6008 6095 -196 773 167 0 0 chr10 73809094 73809214 -71780074 - FRAM SINE Alu -56 120 1 1084 113 24 71 chr10 73809216 73809244 -71780044 + L1MA8 LINE L1 6082 6110 -181 2267 120 0 0 chr10 73809244 73809545 -71779743 - AluSx SINE Alu -9 303 3 1084 113 24 71 chr10 73809545 73809728 -71779560 + L1MA8 LINE L1 6110 6283 -8 360 0 0 0 chr10 73810033 73810073 -71779215 + (TA)n Simple_repeat Simple_repeat 2 41 0 2141 133 7 0 chr10 73810073 73810381 -71778907 - AluSx SINE Alu -2 310 1 1671 143 19 84 chr10 73810812 73810991 -71778297 - AluJb SINE Alu -12 300 150 2200 125 0 6 chr10 73810991 73811303 -71777985 - AluSx SINE Alu -2 310 1 1671 143 19 84 chr10 73811303 73811444 -71777844 - AluJb SINE Alu -162 150 1 1849 155 3 17 chr10 73811454 73811744 -71777544 - AluJb SINE Alu -24 288 3 2018 111 0 86 chr10 73811985 73812310 -71776978 - AluSx SINE Alu -15 297 1 239 267 125 25 chr10 73812354 73812474 -71776814 - L1ME4a LINE L1 -2 6119 5988 2403 79 0 10 chr10 73812510 73812814 -71776474 + AluY SINE Alu 1 301 -10 252 0 0 0 chr10 73812860 73812888 -71776400 + (A)n Simple_repeat Simple_repeat 1 28 0 2093 147 0 0 chr10 73813146 73813446 -71775842 + AluJb SINE Alu 1 300 -12 198 0 0 0 chr10 73813548 73813570 -71775718 + (A)n Simple_repeat Simple_repeat 1 22 0 2205 116 0 7 chr10 73814122 73814415 -71774873 - AluSg SINE Alu -17 293 3 610 209 0 0 chr10 73814498 73814608 -71774680 - FRAM SINE Alu -25 151 42 2066 110 14 3 chr10 73814651 73814933 -71774355 - AluSg SINE Alu -25 285 1 1434 169 82 8 chr10 73815276 73815531 -71773757 + AluJo SINE Alu 1 274 -38 436 143 121 0 chr10 73815698 73815789 -71773499 + Alu SINE Alu 209 310 0 2012 132 0 3 chr10 73815914 73816201 -71773087 - AluSx SINE Alu -26 286 1 713 191 16 0 chr10 73816401 73816527 -71772761 + FLAM_A SINE Alu 2 129 -4 1689 173 7 0 chr10 73816783 73817066 -71772222 - AluJb SINE Alu -21 291 7 503 258 88 0 chr10 73817089 73817271 -71772017 - L1MC5 LINE L1 -58 7903 7706 532 250 108 7 chr10 73817338 73817486 -71771802 + MIR3 SINE MIR 23 185 -23 207 200 0 25 chr10 73817452 73817492 -71771796 + L3 LINE CR1 1525 1563 -14 * 215 30 0 30 chr10 73817566 73817599 -71771689 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 2023 114 30 20 chr10 73817777 73818074 -71771214 - AluSx SINE Alu -12 300 1 872 135 0 8 chr10 73818673 73818799 -71770489 + AluSq/x SINE Alu 1 125 -187 263 50 50 0 chr10 73818799 73818839 -71770449 + (GAAAA)n Simple_repeat Simple_repeat 3 44 0 2285 102 0 0 chr10 73819564 73819880 -71769408 - AluY SINE Alu 0 316 1 2235 102 7 0 chr10 73820271 73820565 -71768723 + AluSx SINE Alu 2 297 -15 596 209 0 0 chr10 73823020 73823130 -71766158 + FLAM_C SINE Alu 2 111 -32 841 86 14 43 chr10 73823146 73823286 -71766002 + FRAM SINE Alu 1 40 0 414 0 0 0 chr10 73823290 73823336 -71765952 + (TA)n Simple_repeat Simple_repeat 2 47 0 1676 208 86 48 chr10 73823872 73824137 -71765151 - L1MD3 LINE L1 -1 8041 7788 615 136 76 68 chr10 73824137 73824269 -71765019 + FLAM_C SINE Alu 1 133 0 1676 208 86 48 chr10 73824269 73824595 -71764693 - L1MD3 LINE L1 -254 7788 7443 451 284 101 6 chr10 73825104 73825273 -71764015 + L1ME LINE L1 5517 5701 -420 230 243 74 40 chr10 73825459 73825607 -71763681 + L1ME LINE L1 5713 5865 -256 640 101 11 0 chr10 73826094 73826209 -71763079 + AluSg/x SINE Alu 193 308 0 1720 160 38 3 chr10 73826309 73826596 -71762692 - AluJb SINE Alu -10 302 6 2204 118 13 0 chr10 73826601 73826906 -71762382 - AluSx SINE Alu -3 309 1 741 262 63 4 chr10 73827032 73827269 -71762019 + MIR SINE MIR 11 261 -1 21 82 0 0 chr10 73827393 73827442 -71761846 + AT_rich Low_complexity Low_complexity 1 49 0 1727 128 161 64 chr10 73827484 73827525 -71761763 - MSTA LTR MaLR 0 428 392 1842 149 0 4 chr10 73827525 73827794 -71761494 + AluSq SINE Alu 1 268 -45 1727 128 161 64 chr10 73827794 73828142 -71761146 - MSTA LTR MaLR -36 392 1 1797 154 14 3 chr10 73828676 73828962 -71760326 - AluJb SINE Alu -19 293 5 208 309 93 21 chr10 73829058 73829155 -71760133 - L2 LINE L2 -4 3309 3206 206 322 69 40 chr10 73829216 73829418 -71759870 - L2 LINE L2 -235 3037 2830 2040 108 0 4 chr10 73829832 73830109 -71759179 - AluSg SINE Alu -6 304 29 2443 69 0 0 chr10 73832068 73832359 -71756929 + AluY SINE Alu 1 291 -20 1846 149 31 7 chr10 73832369 73832658 -71756630 + AluJb SINE Alu 1 296 -16 211 209 0 0 chr10 73832659 73832702 -71756586 - L2 LINE L2 -4 3309 3267 543 264 115 81 chr10 73833070 73833263 -71756025 - L2 LINE L2 0 3313 3128 2289 101 3 3 chr10 73833263 73833561 -71755727 - AluSx SINE Alu -14 298 1 543 264 115 81 chr10 73833561 73833922 -71755366 - L2 LINE L2 -185 3128 2715 2068 88 91 0 chr10 73833922 73834207 -71755081 - AluY SINE Alu 0 311 1 543 264 115 81 chr10 73834207 73834403 -71754885 - L2 LINE L2 -598 2715 2527 2156 121 3 13 chr10 73834897 73835211 -71754077 + AluSx SINE Alu 1 311 -1 801 178 0 86 chr10 73835415 73835513 -71753775 + AluJb SINE Alu 134 214 -98 2407 78 20 0 chr10 73835513 73835809 -71753479 + AluSg SINE Alu 1 302 -8 801 178 0 86 chr10 73835809 73835873 -71753415 + AluJb SINE Alu 214 282 -30 33 0 0 0 chr10 73835875 73835908 -71753380 + AT_rich Low_complexity Low_complexity 1 33 0 1953 113 7 48 chr10 73835912 73836056 -71753232 + AluSg SINE Alu 1 149 -169 2637 44 0 0 chr10 73836056 73836352 -71752936 + AluY SINE Alu 1 296 -15 1953 113 7 48 chr10 73836352 73836537 -71752751 + AluSg SINE Alu 149 318 0 767 160 8 16 chr10 73836555 73836680 -71752608 + FLAM_A SINE Alu 8 131 -11 2225 117 0 0 chr10 73836742 73837033 -71752255 - AluSx SINE Alu -21 291 1 29 28 0 0 chr10 73837342 73837378 -71751910 + AT_rich Low_complexity Low_complexity 1 36 0 389 219 130 22 chr10 73837387 73837562 -71751726 + L1MC5 LINE L1 6712 6847 -1114 2771 154 40 21 chr10 73837563 73838120 -71751168 + L1MB7 LINE L1 5579 6145 -39 180 0 0 0 chr10 73838123 73838143 -71751145 + (TA)n Simple_repeat Simple_repeat 2 21 0 1440 215 128 61 chr10 73838209 73838778 -71750510 + MLT1E1 LTR MaLR 1 649 -5 1232 197 138 72 chr10 73838778 73838916 -71750372 + L1MC5 LINE L1 6899 7027 -934 2387 78 0 20 chr10 73838916 73839247 -71750041 + AluSg SINE Alu 1 310 0 1232 197 138 72 chr10 73839247 73839437 -71749851 + L1MC5 LINE L1 7027 7203 -758 2178 98 6 25 chr10 73839437 73839752 -71749536 + AluSg SINE Alu 1 309 -1 1232 197 138 72 chr10 73839752 73840016 -71749272 + L1MC5 LINE L1 7203 7531 -430 22 0 0 0 chr10 73840397 73840419 -71748869 + AT_rich Low_complexity Low_complexity 1 22 0 814 154 0 0 chr10 73840426 73840543 -71748745 - FLAM_C SINE Alu -24 119 3 181 381 34 0 chr10 73840740 73840858 -71748430 - L2 LINE L2 -12 3301 3180 861 128 0 23 chr10 73841062 73841195 -71748093 - FLAM_C SINE Alu -3 130 1 573 235 115 85 chr10 73841297 73841722 -71747566 + L1ME LINE L1 5325 5762 -359 1035 156 12 12 chr10 73842019 73842192 -71747096 + AluJb SINE Alu 1 173 -139 370 320 55 52 chr10 73842449 73842756 -71746532 - HAL1b LINE L1 -554 794 484 2250 127 0 0 chr10 73842756 73843063 -71746225 - AluSg SINE Alu -3 307 1 370 320 55 52 chr10 73843063 73843120 -71746168 - HAL1b LINE L1 -864 484 429 1931 147 24 20 chr10 73843535 73843828 -71745460 - AluJo SINE Alu -18 294 1 1605 176 3 42 chr10 73843839 73844146 -71745142 - AluSx SINE Alu -17 295 1 243 200 80 0 chr10 73844607 73844657 -71744631 + L1M4 LINE L1 5554 5607 -514 852 274 67 45 chr10 73844666 73845042 -71744246 - MLT1I LTR MaLR 0 409 26 2381 76 0 3 chr10 73845354 73845644 -71743644 - AluSc SINE Alu -20 289 1 1654 174 10 35 chr10 73845644 73845955 -71743333 - AluJb SINE Alu -9 303 1 220 278 122 97 chr10 73846349 73846637 -71742651 + L3 LINE CR1 73 367 -1210 224 330 121 0 chr10 73846693 73846784 -71742504 + MIR3 SINE MIR 55 156 -52 296 350 55 16 chr10 73846988 73847171 -71742117 - L3 LINE CR1 -258 1319 1130 1792 172 3 7 chr10 73847189 73847479 -71741809 - AluJb SINE Alu -23 289 1 243 167 0 0 chr10 73847525 73847561 -71741727 + L1M4 LINE L1 5621 5656 -528 2950 154 35 48 chr10 73847564 73848168 -71741120 - L1MC2 LINE L1 -25 6319 5724 830 237 32 99 chr10 73848234 73848505 -71740783 - L1MC2 LINE L1 -863 5283 5054 2202 103 3 0 chr10 73848505 73848796 -71740492 - AluSq SINE Alu -21 292 1 830 237 32 99 chr10 73848796 73848988 -71740300 - L1MC2 LINE L1 -1092 5054 4851 322 258 90 45 chr10 73848989 73849167 -71740121 - L1 LINE L1 -1170 4976 4791 1608 151 110 24 chr10 73849194 73849531 -71739757 - L1MB7 LINE L1 0 6184 5819 219 114 0 0 chr10 73849539 73849574 -71739714 + (TTCA)n Simple_repeat Simple_repeat 2 36 0 2012 125 29 0 chr10 73849574 73849846 -71739442 - AluSg SINE Alu -27 283 1 4114 166 39 21 chr10 73849870 73851160 -71738128 - L1MB4 LINE L1 -6 6174 4862 1822 159 16 3 chr10 73851165 73851473 -71737815 - AluJb SINE Alu 0 312 1 2471 70 0 3 chr10 73852216 73852517 -71736771 - AluY SINE Alu -11 300 1 2437 189 63 75 chr10 73852568 73852978 -71736310 + L1MC4 LINE L1 7265 7678 -364 787 207 20 0 chr10 73852978 73853128 -71736160 - FRAM SINE Alu -11 155 3 2437 189 63 75 chr10 73853128 73853196 -71736092 + L1MC4 LINE L1 7678 7745 -297 2268 113 10 3 chr10 73853196 73853506 -71735782 - AluSx SINE Alu 0 312 1 186 71 0 0 chr10 73853510 73853538 -71735750 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 1767 134 40 7 chr10 73853541 73853817 -71735471 - AluSx SINE Alu -27 285 1 2437 189 63 75 chr10 73853817 73853868 -71735420 + L1MC4 LINE L1 7750 7800 -242 2286 76 28 3 chr10 73853868 73854157 -71735131 - AluY SINE Alu -14 297 2 2437 189 63 75 chr10 73854157 73854403 -71734885 + L1MC4 LINE L1 7800 8042 0 259 357 119 7 chr10 73854801 73854944 -71734344 + L3 LINE CR1 1414 1572 -5 214 354 39 23 chr10 73855653 73855783 -71733505 + MIR3 SINE MIR 5 136 -72 855 201 32 0 chr10 73858110 73858264 -71731024 - FRAM SINE Alu -17 159 1 21 0 0 0 chr10 73858340 73858361 -71730927 + AT_rich Low_complexity Low_complexity 1 21 0 1567 171 22 25 chr10 73858404 73858678 -71730610 - AluJo SINE Alu -30 282 10 2242 112 3 0 chr10 73858719 73859013 -71730275 - AluSq SINE Alu -18 295 1 228 259 25 12 chr10 73859017 73859098 -71730190 - L1ME LINE L1 -312 5809 5728 426 162 0 0 chr10 73859464 73859532 -71729756 - FLAM_A SINE Alu -28 114 47 1572 188 0 33 chr10 73859614 73859918 -71729370 + AluJo SINE Alu 1 294 -18 1996 118 41 0 chr10 73859918 73860189 -71729099 + AluSx SINE Alu 1 282 -30 2460 70 0 3 chr10 73860281 73860580 -71728708 - AluY SINE Alu -13 298 1 342 241 58 7 chr10 73860793 73860930 -71728358 + L1ME4a LINE L1 5769 5912 -209 1228 163 49 5 chr10 73861041 73861244 -71728044 - AluJb SINE Alu -13 299 88 1294 97 0 11 chr10 73861793 73861969 -71727319 - AluSg/x SINE Alu -7 305 132 2326 97 0 0 chr10 73861984 73862284 -71727004 - AluY SINE Alu -11 300 1 1466 142 0 130 chr10 73862393 73862717 -71726571 - AluJb SINE Alu -30 282 1 680 194 11 69 chr10 73863200 73863229 -71726059 - MER20 DNA MER1_type 0 219 190 626 235 0 0 chr10 73863229 73863368 -71725920 - FLAM_A SINE Alu 0 139 1 680 194 11 69 chr10 73863368 73863512 -71725776 - MER20 DNA MER1_type -29 190 55 2313 84 7 3 chr10 73863512 73863808 -71725480 + AluSx SINE Alu 1 297 -15 442 240 112 72 chr10 73863814 73864135 -71725153 - HAL1 LINE L1 -31 2476 2143 293 278 76 21 chr10 73864199 73864343 -71724945 - HAL1b LINE L1 -451 897 746 1183 117 0 0 chr10 73864356 73864518 -71724770 + AluY SINE Alu 133 294 -17 1808 163 0 10 chr10 73864657 73864945 -71724343 - AluJo SINE Alu -27 285 1 315 259 56 37 chr10 73865078 73865186 -71724102 - HAL1 LINE L1 -575 1932 1823 1828 133 39 3 chr10 73865229 73865515 -71723773 + AluSx SINE Alu 1 296 -16 1193 186 0 18 chr10 73865819 73866039 -71723249 + AluJb SINE Alu 1 216 -96 1527 182 36 126 chr10 73866198 73866600 -71722688 - MLT1D LTR MaLR 0 505 165 2199 86 43 0 chr10 73866600 73866880 -71722408 + AluY SINE Alu 1 292 -19 1527 182 36 126 chr10 73866880 73867032 -71722256 - MLT1D LTR MaLR -340 165 1 204 125 0 0 chr10 73867061 73867093 -71722195 + (GAAAA)n Simple_repeat Simple_repeat 2 33 0 887 266 95 43 chr10 73867126 73867495 -71721793 - MLT1K LTR MaLR -157 431 44 627 138 0 73 chr10 73867497 73867568 -71721720 + L1MB3 LINE L1 6068 6128 -55 2179 125 0 0 chr10 73867568 73867864 -71721424 + AluJb SINE Alu 1 296 -16 627 138 0 73 chr10 73867864 73867915 -71721373 + L1MB3 LINE L1 6128 6181 -2 979 233 115 32 chr10 73867940 73868253 -71721035 + MLT1K LTR MaLR 248 586 -2 347 167 0 0 chr10 73868436 73868490 -71720798 - Charlie1b DNA MER1_type 0 523 470 834 163 0 0 chr10 73868499 73868622 -71720666 + FLAM_C SINE Alu 1 123 -20 1635 161 88 96 chr10 73868630 73868715 -71720573 - Charlie1b DNA MER1_type -2274 487 403 1913 162 0 10 chr10 73868715 73869029 -71720259 - AluJo SINE Alu -1 311 1 1635 161 88 96 chr10 73869029 73869110 -71720178 - Charlie1b DNA MER1_type -2358 403 323 2080 122 34 0 chr10 73869110 73869404 -71719884 - AluSx SINE Alu -8 304 1 1635 161 88 96 chr10 73869404 73869465 -71719823 - Charlie1b DNA MER1_type -2438 323 263 2304 86 0 0 chr10 73869465 73869860 -71719428 - AluSg SINE Alu 0 395 1 1635 161 88 96 chr10 73869860 73870120 -71719168 - Charlie1b DNA MER1_type -2498 263 1 497 239 101 0 chr10 73870135 73870273 -71719015 + MIR SINE MIR 47 198 -64 212 193 227 11 chr10 73870565 73870653 -71718635 + L2 LINE L2 3193 3299 -14 1430 103 38 86 chr10 73870659 73870821 -71718467 - AluJo SINE Alu -24 288 145 2306 100 0 0 chr10 73870821 73871120 -71718168 - AluSx SINE Alu -13 299 1 1430 103 38 86 chr10 73871120 73871247 -71718041 - AluJo SINE Alu -167 145 13 2052 141 13 7 chr10 73871440 73871738 -71717550 - AluJo SINE Alu -12 300 1 2133 113 31 0 chr10 73872221 73872512 -71716776 - AluSx SINE Alu -12 300 1 2150 164 67 5 chr10 73873269 73873659 -71715629 + MLT2D LTR ERVL 1 414 0 1972 115 7 24 chr10 73873893 73874181 -71715107 + AluSx SINE Alu 13 295 -17 299 293 52 9 chr10 73874514 73874630 -71714658 - L2 LINE L2 -1 3271 3151 423 240 29 76 chr10 73874919 73875090 -71714198 + MIR SINE MIR 39 201 -61 2171 122 7 10 chr10 73875196 73875500 -71713788 - AluSx SINE Alu -9 303 1 2174 132 0 0 chr10 73876778 73877074 -71712214 - AluSx SINE Alu -16 296 1 1832 159 3 36 chr10 73877140 73877442 -71711846 + AluJb SINE Alu 1 292 -20 338 275 19 32 chr10 73877893 73878044 -71711244 - MIR SINE MIR -49 159 9 182 238 59 69 chr10 73878122 73878223 -71711065 - MER5B DNA MER1_type -62 116 17 2163 91 3 21 chr10 73878274 73878561 -71710727 - AluSp SINE Alu -31 282 1 2318 102 7 0 chr10 73878810 73879113 -71710175 + AluSx SINE Alu 1 305 -7 1262 217 21 31 chr10 73879518 73879705 -71709583 + MER33 DNA MER1_type 1 185 -2400 2206 108 3 0 chr10 73879705 73880002 -71709286 + AluSg SINE Alu 1 298 -12 1262 217 21 31 chr10 73880002 73880141 -71709147 + MER33 DNA MER1_type 185 324 0 693 217 25 25 chr10 73880317 73880478 -71708810 + FRAM SINE Alu 1 159 -17 2176 110 0 0 chr10 73880483 73880793 -71708495 + AluSc SINE Alu 3 312 0 2704 36 0 0 chr10 73880795 73881098 -71708190 + AluY SINE Alu 1 303 -8 737 155 0 9 chr10 73881122 73881238 -71708050 + FLAM_A SINE Alu 11 125 -17 2176 91 3 24 chr10 73881256 73881552 -71707736 + AluY SINE Alu 6 295 -16 1610 217 67 34 chr10 73881678 73882125 -71707163 - MLT1C LTR MaLR 0 467 6 371 284 46 0 chr10 73882226 73882335 -71706953 - L2 LINE L2 -23 3249 3136 544 283 93 35 chr10 73882973 73883284 -71706004 + L2 LINE L2 2985 3313 0 201 266 78 0 chr10 73883490 73883554 -71705734 + MER91C DNA MER1_type 36 104 -36 1538 147 12 102 chr10 73883833 73884166 -71705122 - AluJb SINE Alu -9 303 1 226 258 84 101 chr10 73884291 73884469 -71704819 - MER5B DNA MER1_type -3 175 1 848 123 112 79 chr10 73884640 73884721 -71704567 - LTR45B LTR ERV1 -131 358 281 1949 134 26 30 chr10 73884721 73884830 -71704458 - AluSx SINE Alu -8 304 196 2379 99 0 0 chr10 73884830 73885134 -71704154 - AluY SINE Alu -7 304 1 1949 134 26 30 chr10 73885134 73885329 -71703959 - AluSx SINE Alu -116 196 1 848 123 112 79 chr10 73885329 73885467 -71703821 - LTR45B LTR ERV1 -208 281 149 2564 14 0 0 chr10 73885467 73885756 -71703532 + L1PA2 LINE L1 5867 6155 0 848 123 112 79 chr10 73885756 73885792 -71703496 - LTR45B LTR ERV1 -340 149 3 1872 208 30 24 chr10 73885803 73886181 -71703107 + Charlie4a DNA MER1_type 27 410 -1551 2504 82 0 0 chr10 73886181 73886485 -71702803 - AluY SINE Alu -7 304 1 1872 208 30 24 chr10 73886485 73886573 -71702715 + Charlie4a DNA MER1_type 410 496 -12 1804 152 57 7 chr10 73889030 73889327 -71699961 + AluJo SINE Alu 1 312 0 2242 94 13 3 chr10 73889344 73889642 -71699646 + AluSx SINE Alu 1 301 -11 231 36 0 0 chr10 73889857 73889885 -71699403 + (TTA)n Simple_repeat Simple_repeat 3 30 0 869 208 0 0 chr10 73889886 73890035 -71699253 - FRAM SINE Alu -17 149 1 2214 113 13 3 chr10 73890046 73890347 -71698941 - AluSq SINE Alu -9 304 1 2117 96 0 17 chr10 73890458 73890791 -71698497 + AluY SINE Alu 1 311 0 1611 180 3 26 chr10 73890791 73891096 -71698192 + AluJo SINE Alu 14 311 -1 623 221 15 0 chr10 73891102 73891233 -71698055 + FLAM_A SINE Alu 1 133 0 621 102 10 10 chr10 73891336 73891434 -71697854 - BC200 scRNA scRNA -54 146 49 2294 111 0 0 chr10 73891490 73891787 -71697501 - AluSx SINE Alu -15 297 1 200 205 123 82 chr10 73892435 73892557 -71696731 - MIR SINE MIR -120 142 16 560 291 50 0 chr10 73892996 73893195 -71696093 - MIR SINE MIR -45 217 9 451 309 26 0 chr10 73893253 73893405 -71695883 + L2 LINE L2 3116 3271 -1 2774 163 57 10 chr10 73893553 73894076 -71695212 + L1MB7 LINE L1 5571 6118 -66 307 235 51 20 chr10 73894081 73894179 -71695109 + MIR SINE MIR 45 145 -63 225 234 0 0 chr10 73894413 73894460 -71694828 + MER5B DNA MER1_type 131 177 -1 652 198 12 62 chr10 73894460 73894622 -71694666 - MER5A DNA MER1_type -12 177 24 273 217 174 0 chr10 73894681 73894773 -71694515 + MER5B DNA MER1_type 20 127 -51 2222 123 0 0 chr10 73894803 73895113 -71694175 + AluSx SINE Alu 1 310 -2 207 127 109 36 chr10 73895243 73895298 -71693990 + MER5B DNA MER1_type 117 175 -3 1051 163 0 17 chr10 73897060 73897232 -71692056 + FRAM SINE Alu 1 169 -7 2335 97 0 22 chr10 73897234 73897554 -71691734 + AluSq SINE Alu 1 313 0 252 259 0 0 chr10 73897818 73897872 -71691416 + L2 LINE L2 3257 3310 -3 1736 174 3 3 chr10 73897985 73898267 -71691021 - AluJo SINE Alu -30 282 1 30 0 0 0 chr10 73899152 73899182 -71690106 + GC_rich Low_complexity Low_complexity 1 30 0 517 109 22 22 chr10 73899186 73899324 -71689964 + C-rich Low_complexity Low_complexity 3 140 0 423 319 39 44 chr10 73899411 73899496 -71689792 + MIR SINE MIR 47 131 -131 995 243 31 27 chr10 73899496 73899560 -71689728 + MIR SINE MIR 2 64 -198 2263 92 0 3 chr10 73899560 73899854 -71689434 + AluSc SINE Alu 1 293 -16 995 243 31 27 chr10 73899854 73900048 -71689240 + MIR SINE MIR 64 261 -1 423 319 39 44 chr10 73900048 73900166 -71689122 + MIR SINE MIR 131 249 -13 182 273 65 52 chr10 73900315 73900392 -71688896 - L2 LINE L2 -50 3222 3145 9356 85 17 15 chr10 73900445 73901688 -71687600 + HSMAR1 DNA Mariner 1 1250 -37 1907 145 0 3 chr10 73901688 73901994 -71687294 + AluSx SINE Alu 1 305 0 9356 85 17 15 chr10 73901994 73902032 -71687256 + HSMAR1 DNA Mariner 1250 1286 -1 1274 171 0 23 chr10 73902128 73902345 -71686943 - AluJo SINE Alu -16 296 85 369 0 0 0 chr10 73902350 73902391 -71686897 + (TG)n Simple_repeat Simple_repeat 2 42 0 456 207 120 13 chr10 73902493 73902643 -71686645 - L1MC5 LINE L1 -78 7883 7718 468 313 68 18 chr10 73902724 73902857 -71686431 + L1ME4a LINE L1 5689 5814 -307 2239 110 0 19 chr10 73902857 73903167 -71686121 + AluSx SINE Alu 1 304 -8 468 313 68 18 chr10 73903167 73903359 -71685929 + L1ME4a LINE L1 5814 6030 -91 685 234 51 22 chr10 73903435 73903709 -71685579 - L1MC5 LINE L1 -247 7714 7433 369 0 0 0 chr10 73903892 73903933 -71685355 + (CA)n Simple_repeat Simple_repeat 2 42 0 2260 82 21 7 chr10 73903933 73904218 -71685070 - AluSg SINE Alu -17 293 5 2151 91 14 0 chr10 73904224 73904499 -71684789 - AluSx SINE Alu -16 296 18 1537 193 26 33 chr10 73904821 73905126 -71684162 - AluJo SINE Alu -9 303 1 1979 146 17 0 chr10 73905759 73906054 -71683234 - AluSx SINE Alu -12 300 1 29 0 0 0 chr10 73906450 73906479 -71682809 + AT_rich Low_complexity Low_complexity 1 29 0 750 123 35 0 chr10 73906605 73906719 -71682569 + 7SLRNA srpRNA srpRNA 203 320 0 602 270 241 0 chr10 73906778 73907052 -71682236 - L1MC4a LINE L1 -1877 5931 5592 854 136 0 8 chr10 73907059 73907184 -71682104 - FLAM_C SINE Alu -19 124 1 410 205 78 176 chr10 73907184 73907398 -71681890 - L1MC4a LINE L1 -2205 5603 5370 651 107 107 9 chr10 73907398 73907510 -71681778 - L1MA9 LINE L1 -8 6304 6182 410 205 78 176 chr10 73907510 73907526 -71681762 - L1MC4a LINE L1 -2438 5370 5354 2700 30 0 7 chr10 73907526 73907831 -71681457 - AluY SINE Alu -8 303 1 410 205 78 176 chr10 73907831 73907945 -71681343 - L1MC4a LINE L1 -2454 5354 5292 1932 145 7 3 chr10 73907988 73908277 -71681011 - AluJo SINE Alu -18 294 5 346 306 12 60 chr10 73908350 73908598 -71680690 - L1MC4a LINE L1 -977 5169 4934 23 0 0 0 chr10 73908644 73908667 -71680621 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr10 73909149 73909171 -71680117 + AT_rich Low_complexity Low_complexity 1 22 0 2422 100 0 0 chr10 73909735 73910046 -71679242 + AluSq SINE Alu 1 311 -2 295 110 14 99 chr10 73910055 73910150 -71679138 + L1MB1 LINE L1 6103 6188 -1 2331 93 3 0 chr10 73910735 73911025 -71678263 - AluY SINE Alu -20 291 1 993 97 0 0 chr10 73911048 73911172 -71678116 - FLAM_C SINE Alu -19 124 1 1964 143 21 0 chr10 73911198 73911485 -71677803 + AluSx SINE Alu 1 293 -19 1329 198 105 52 chr10 73911485 73911924 -71677364 + L1ME3A LINE L1 5696 6157 -13 202 348 248 21 chr10 73912098 73912239 -71677049 + L2 LINE L2 2999 3171 -101 1892 107 89 4 chr10 73912655 73912925 -71676363 + AluSg SINE Alu 1 293 -17 2054 145 0 6 chr10 73913454 73913765 -71675523 - AluJb SINE Alu -3 309 1 477 73 0 0 chr10 73913961 73914029 -71675259 + Alu SINE Alu 242 309 -1 24 32 0 0 chr10 73915758 73915789 -71673499 + AT_rich Low_complexity Low_complexity 1 31 0 181 89 44 44 chr10 73916069 73916085 -71673203 + GA-rich Low_complexity Low_complexity 4 19 -29 2157 138 0 6 chr10 73916085 73916397 -71672891 + AluSg SINE Alu 1 310 0 181 89 44 44 chr10 73916397 73916425 -71672863 + GA-rich Low_complexity Low_complexity 18 48 0 1921 172 25 3 chr10 73916836 73917191 -71672097 - MLT1B LTR MaLR 0 390 28 2346 113 0 3 chr10 73918068 73918379 -71670909 + AluSx SINE Alu 1 310 -2 198 103 0 0 chr10 73918382 73918411 -71670877 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 441 130 0 0 chr10 73918913 73918982 -71670306 - L1MB8 LINE L1 -6 6172 6104 2249 130 0 0 chr10 73918983 73919284 -71670004 + AluSx SINE Alu 1 301 -11 1579 176 55 0 chr10 73919576 73919883 -71669405 + MER33 DNA MER1_type 1 324 0 2047 117 37 0 chr10 73920033 73920333 -71668955 + AluY SINE Alu 1 311 0 513 204 204 0 chr10 73920471 73920618 -71668670 - MIR SINE MIR -20 242 66 45 15 0 30 chr10 73921007 73921041 -71668247 + AT_rich Low_complexity Low_complexity 1 34 -31 1576 158 30 47 chr10 73921041 73921339 -71667949 - AluJb SINE Alu -19 293 1 45 15 0 30 chr10 73921339 73921371 -71667917 + AT_rich Low_complexity Low_complexity 34 65 0 2425 93 0 0 chr10 73921463 73921763 -71667525 + AluSx SINE Alu 1 300 -12 1924 145 0 3 chr10 73922066 73922370 -71666918 + AluSx SINE Alu 1 303 0 560 270 149 18 chr10 73922764 73922986 -71666302 - MIR SINE MIR 0 262 12 1561 154 9 69 chr10 73923135 73923454 -71665834 + AluJo SINE Alu 5 304 -8 2191 105 0 17 chr10 73923709 73923866 -71665422 - AluSq SINE Alu -23 290 139 2535 57 0 3 chr10 73923866 73924165 -71665123 - AluY SINE Alu -13 298 1 2191 105 0 17 chr10 73924165 73924302 -71664986 - AluSq SINE Alu -174 139 1 2004 115 3 19 chr10 73924610 73924931 -71664357 + L1MB7 LINE L1 5743 6058 -126 929 103 0 0 chr10 73924934 73925051 -71664237 + FLAM_C SINE Alu 2 118 -25 1961 158 10 3 chr10 73925115 73925413 -71663875 + AluJo SINE Alu 1 300 -12 1771 138 33 26 chr10 73925737 73926042 -71663246 - AluJo SINE Alu -4 308 2 751 158 0 0 chr10 73926262 73926376 -71662912 + FLAM_C SINE Alu 9 122 -21 1281 114 38 0 chr10 73926381 73926565 -71662723 + AluSq SINE Alu 1 191 -122 1067 152 54 134 chr10 73926570 73926847 -71662441 + AluJb SINE Alu 40 294 -18 210 128 0 43 chr10 73926854 73926901 -71662387 + (TAAAAA)n Simple_repeat Simple_repeat 3 47 0 776 208 184 118 chr10 73927074 73927412 -71661876 + LTR33A LTR ERVL 7 388 -135 1970 120 72 0 chr10 73927412 73927703 -71661585 - AluSq SINE Alu -1 312 1 776 208 184 118 chr10 73927703 73927849 -71661439 + LTR33A LTR ERVL 388 523 0 488 307 205 7 chr10 73927852 73928215 -71661073 + L2 LINE L2 1533 1823 -1491 1760 144 7 14 chr10 73928215 73928499 -71660789 + AluJb SINE Alu 13 294 -18 488 307 205 7 chr10 73928499 73928705 -71660583 + L2 LINE L2 1823 2215 -1099 294 268 109 29 chr10 73928808 73928946 -71660342 + L2 LINE L2 3158 3306 -7 1842 123 20 27 chr10 73929376 73929677 -71659611 - AluSq SINE Alu -14 299 1 2099 108 21 3 chr10 73929707 73929994 -71659294 + AluSg SINE Alu 1 292 -18 2257 237 85 58 chr10 73931287 73932061 -71657227 + L1ME1 LINE L1 5258 6060 -106 1303 189 6 87 chr10 73932061 73932373 -71656915 - AluJo SINE Alu -21 291 5 2257 237 85 58 chr10 73932373 73932483 -71656805 + L1ME1 LINE L1 6060 6166 0 22 56 0 0 chr10 73932559 73932595 -71656693 + AT_rich Low_complexity Low_complexity 1 36 0 26 30 0 0 chr10 73932696 73932729 -71656559 + AT_rich Low_complexity Low_complexity 1 33 0 1921 147 3 3 chr10 73932729 73933028 -71656260 - AluJb SINE Alu -13 299 1 180 0 0 0 chr10 73933318 73933338 -71655950 + (T)n Simple_repeat Simple_repeat 1 20 0 2221 114 3 3 chr10 73933825 73934122 -71655166 - AluSx SINE Alu -15 297 1 350 172 65 0 chr10 73934124 73934217 -71655071 - L1M4 LINE L1 -3119 3027 2929 857 138 5 134 chr10 73934217 73934434 -71654854 - AluSg/x SINE Alu -1 311 123 440 160 113 27 chr10 73934438 73934588 -71654700 - L1M4 LINE L1 -3238 2908 2746 228 267 0 0 chr10 73935452 73935512 -71653776 + G-rich Low_complexity Low_complexity 4 63 0 21 57 0 0 chr10 73935682 73935717 -71653571 + GC_rich Low_complexity Low_complexity 1 35 0 180 0 0 0 chr10 73936630 73936650 -71652638 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 206 252 308 19 chr10 73936683 73936790 -71652498 - L2 LINE L2 -1 3271 3134 1224 119 0 57 chr10 73937537 73937731 -71651557 + AluSx SINE Alu 5 187 -125 474 83 97 0 chr10 73937733 73937805 -71651483 + AluSg/x SINE Alu 88 166 -146 1831 92 108 64 chr10 73937934 73938229 -71651059 + AluSx SINE Alu 1 308 -4 2343 99 3 0 chr10 73938591 73938895 -71650393 - AluSx SINE Alu -7 305 1 34 0 0 0 chr10 73938986 73939020 -71650268 + AT_rich Low_complexity Low_complexity 1 34 0 911 118 15 22 chr10 73939193 73939329 -71649959 + AluJb SINE Alu 1 135 -177 1636 182 20 24 chr10 73939329 73939625 -71649663 + AluJo SINE Alu 1 295 -17 2441 98 0 0 chr10 73940511 73940808 -71648480 + AluSx SINE Alu 1 297 -15 1949 157 23 3 chr10 73940814 73941120 -71648168 + AluJb SINE Alu 1 312 0 2304 83 3 22 chr10 73941120 73941434 -71647854 + AluSx SINE Alu 1 308 -4 752 228 98 18 chr10 73941607 73941818 -71647470 - MIR SINE MIR -1 261 30 1125 201 48 0 chr10 73941818 73942027 -71647261 + MER20 DNA MER1_type 1 219 0 752 228 98 18 chr10 73942027 73942039 -71647249 - MIR SINE MIR -232 30 20 980 129 8 0 chr10 73942714 73942846 -71646442 - FLAM_C SINE Alu -10 133 1 243 61 0 0 chr10 73942909 73942942 -71646346 + (TTA)n Simple_repeat Simple_repeat 2 34 0 363 206 0 14 chr10 73942961 73943034 -71646254 - FRAM/FAM SINE Alu -100 66 1 1023 111 0 35 chr10 73943118 73943262 -71646026 - AluSq/x SINE Alu -174 139 1 2453 86 0 10 chr10 73943270 73943574 -71645714 - AluSx SINE Alu -11 301 1 551 219 25 8 chr10 73946886 73947005 -71642283 + MER5B DNA MER1_type 1 121 -57 898 200 40 11 chr10 73947030 73947205 -71642083 + AluJo SINE Alu 22 201 -111 1437 153 24 35 chr10 73947205 73947382 -71641906 + LTR12 LTR ERV1 1 175 -539 1915 91 28 4 chr10 73947382 73947635 -71641653 + AluSp SINE Alu 1 259 -54 1437 153 24 35 chr10 73947635 73947745 -71641543 + LTR12 LTR ERV1 175 285 -429 279 233 0 0 chr10 73947745 73947818 -71641470 + LTR30 LTR ERV1 552 624 -98 573 154 36 18 chr10 73947822 73947932 -71641356 + LTR12 LTR ERV1 470 581 -133 400 224 47 0 chr10 73947933 73948018 -71641270 + AluJo SINE Alu 199 287 -25 635 137 0 20 chr10 73948196 73948298 -71640990 + FLAM_C SINE Alu 38 137 -6 194 129 0 0 chr10 73948750 73948781 -71640507 + MIR3 SINE MIR 172 202 -6 1790 115 0 0 chr10 73948791 73949034 -71640254 - AluY SINE Alu -4 307 65 1576 96 10 103 chr10 73949036 73949337 -71639951 + LTR12 LTR ERV1 1 273 -441 300 206 11 33 chr10 73949368 73949460 -71639828 + LTR30 LTR ERV1 553 642 -80 619 116 0 0 chr10 73949462 73949548 -71639740 + LTR12 LTR ERV1 481 566 -148 522 113 0 25 chr10 73949548 73949628 -71639660 - AluSg1 SINE Alu -230 79 2 637 187 0 0 chr10 73950102 73950209 -71639079 + U6 snRNA snRNA 1 107 0 3464 155 25 9 chr10 73950209 73950880 -71638408 + L1P LINE L1 2561 3242 -2904 617 136 8 25 chr10 73951528 73951646 -71637642 - L1PA16 LINE L1 -3 6163 6048 26 50 0 0 chr10 73951671 73951711 -71637577 + AT_rich Low_complexity Low_complexity 1 40 0 2576 51 3 13 chr10 73952710 73953024 -71636264 + AluY SINE Alu 1 311 0 1006 224 134 34 chr10 73953164 73953521 -71635767 + MSTD LTR MaLR 1 393 -3 753 170 195 6 chr10 73953561 73953720 -71635568 + MER5A DNA MER1_type 1 189 0 262 306 110 84 chr10 73953789 73954099 -71635189 - L2 LINE L2 -389 2925 2608 522 184 35 0 chr10 73954429 73954516 -71634772 + FLAM_A SINE Alu 1 90 -52 1611 111 65 15 chr10 73954614 73954876 -71634412 + AluSx SINE Alu 1 275 -37 22 0 0 0 chr10 73954996 73955018 -71634270 + AT_rich Low_complexity Low_complexity 1 22 0 2081 148 3 0 chr10 73955018 73955323 -71633965 + AluJb SINE Alu 1 306 -6 2334 97 3 0 chr10 73955363 73955674 -71633614 - AluSx SINE Alu 0 312 1 248 232 43 0 chr10 73955705 73955774 -71633514 - L1ME LINE L1 -457 5664 5593 260 261 14 0 chr10 73955774 73955843 -71633445 + MIR3 SINE MIR 131 200 -8 2166 106 0 27 chr10 73957456 73957757 -71631531 + AluSx SINE Alu 1 293 -19 395 178 108 127 chr10 73959021 73959120 -71630168 + MIR3 SINE MIR 40 136 -72 1989 185 58 52 chr10 73959120 73959618 -71629670 - MLT1D LTR MaLR 0 505 5 395 178 108 127 chr10 73959618 73959675 -71629613 + MIR3 SINE MIR 136 193 -15 2260 117 7 0 chr10 73959717 73960142 -71629146 + AluSx SINE Alu 1 427 0 498 268 85 0 chr10 73961014 73961178 -71628110 + MER5B DNA MER1_type 1 178 0 267 175 0 0 chr10 73961346 73961386 -71627902 + Alu SINE Alu 1 40 -261 2310 110 7 0 chr10 73961386 73961737 -71627551 - AluSg SINE Alu 0 353 1 635 162 0 36 chr10 73961737 73961848 -71627440 + FLAM_C SINE Alu 27 133 -10 181 279 88 75 chr10 73961856 73962003 -71627285 + MIR SINE MIR 111 259 -3 239 260 102 47 chr10 73962587 73962714 -71626574 + MIR SINE MIR 20 153 -55 299 310 102 42 chr10 73962959 73963320 -71625968 - L2 LINE L2 -459 2855 2473 294 327 47 9 chr10 73963546 73963653 -71625635 - L2 LINE L2 -30 3242 3132 360 222 45 97 chr10 73963792 73963968 -71625320 - MER69A DNA AcHobo -3 174 8 208 242 234 55 chr10 73963969 73964097 -71625191 - MIR SINE MIR -1 261 111 270 325 21 10 chr10 73964453 73964563 -71624725 + MIR SINE MIR 45 154 -71 216 111 0 0 chr10 73965584 73965620 -71623668 + (GGA)n Simple_repeat Simple_repeat 2 37 0 596 283 25 6 chr10 73966443 73966602 -71622686 + MIR SINE MIR 69 230 -32 285 20 39 39 chr10 73966990 73967041 -71622247 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 2221 100 0 0 chr10 73967043 73967323 -71621965 - AluSx SINE Alu -32 280 1 826 179 6 19 chr10 73967325 73967481 -71621807 - FRAM SINE Alu -12 154 1 271 328 60 35 chr10 73967790 73967906 -71621382 - MIR SINE MIR -21 241 123 837 194 0 0 chr10 73967912 73968051 -71621237 + FLAM_C SINE Alu 5 143 0 198 277 69 54 chr10 73968404 73968534 -71620754 - MIR SINE MIR -57 151 20 2595 51 0 0 chr10 73968552 73968846 -71620442 - AluY SINE Alu -17 294 1 453 246 144 12 chr10 73968936 73969103 -71620185 + MER5A DNA MER1_type 1 189 0 323 290 163 32 chr10 73969723 73969944 -71619344 - MIR SINE MIR -12 250 1 811 105 0 0 chr10 73970320 73970425 -71618863 + AluSq/x SINE Alu 1 105 -207 416 295 103 58 chr10 73970694 73971006 -71618282 - L2 LINE L2 -14 3258 2933 226 266 58 93 chr10 73971065 73971204 -71618084 - L2 LINE L2 -469 2845 2712 1818 161 10 29 chr10 73971543 73971853 -71617435 + AluJb SINE Alu 1 304 -8 23 0 0 0 chr10 73973218 73973241 -71616047 + AT_rich Low_complexity Low_complexity 1 23 0 359 252 55 8 chr10 73973351 73973478 -71615810 + MER102a DNA MER1_type 197 329 -1 226 231 0 0 chr10 73973516 73973568 -71615720 + MER96 DNA MER1_type? 2 53 -122 233 333 0 0 chr10 73973740 73973836 -71615452 + MER34 LTR ERV1 1 96 -446 790 231 105 14 chr10 73973888 73974144 -71615144 + LTR29 LTR ERV1 170 446 -149 2117 119 0 7 chr10 73974144 73974438 -71614850 + AluSx SINE Alu 1 292 -20 790 231 105 14 chr10 73974438 73974598 -71614690 + LTR29 LTR ERV1 446 590 -5 2285 108 3 0 chr10 73974748 73975045 -71614243 + AluSg SINE Alu 1 298 -12 1576 99 22 83 chr10 73975296 73975609 -71613679 + MER4B LTR ERV1 1 294 -316 2410 91 0 0 chr10 73975611 73975907 -71613381 - AluSx SINE Alu -16 296 1 996 143 53 16 chr10 73975907 73976096 -71613192 + MER4E LTR ERV1 584 779 0 2247 125 0 0 chr10 73976239 73976543 -71612745 - AluSx SINE Alu -8 304 1 435 145 0 0 chr10 73976546 73976615 -71612673 - AluY SINE Alu -12 297 229 2397 86 0 10 chr10 73976615 73976917 -71612371 - AluSq SINE Alu -14 299 1 1761 119 4 4 chr10 73976918 73977162 -71612126 - AluY SINE Alu -67 244 1 1907 144 0 22 chr10 73977227 73977422 -71611866 + MER1B DNA MER1_type 34 221 -2491 2341 164 47 45 chr10 73977422 73977911 -71611377 + LTR2B LTR ERV1 1 490 0 1907 144 0 22 chr10 73977911 73978027 -71611261 + MER1B DNA MER1_type 221 338 -1 2123 133 3 3 chr10 73978050 73978351 -71610937 + AluSx SINE Alu 1 301 -11 987 236 22 9 chr10 73978417 73978642 -71610646 - MIR SINE MIR -2 260 33 295 319 50 6 chr10 73979029 73979189 -71610099 + L2 LINE L2 2246 2412 -902 294 258 90 0 chr10 73979184 73979273 -71610015 - L2 LINE L2 0 3313 3217 * 1131 188 53 145 chr10 73979275 73979770 -71609518 + MER4A LTR ERV1 29 286 -179 2225 97 7 13 chr10 73979770 73980114 -71609174 - AluY SINE Alu 0 311 1 1131 188 53 145 chr10 73980114 73980272 -71609016 + MER4A LTR ERV1 286 457 -8 2381 94 10 3 chr10 73980274 73980616 -71608672 - AluSx SINE Alu 0 344 1 182 321 12 62 chr10 73980657 73980738 -71608550 - L2 LINE L2 -94 3219 3143 845 251 27 53 chr10 73980775 73981074 -71608214 + MLT1J LTR MaLR 20 310 -201 606 240 78 16 chr10 73981110 73981302 -71607986 + MLT1C LTR MaLR 193 396 -71 4341 108 14 68 chr10 73981426 73981581 -71607707 + LTR8 LTR ERV1 1 163 -528 2185 104 0 0 chr10 73981581 73981861 -71607427 + AluSx SINE Alu 1 280 -32 422 18 0 18 chr10 73981867 73981923 -71607365 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 4341 108 14 68 chr10 73981923 73982491 -71606797 + LTR8 LTR ERV1 168 691 0 1222 123 0 52 chr10 73982491 73982702 -71606586 + HUERS-P1 LTR ERV1 1 200 -6063 1018 111 14 0 chr10 73982702 73982846 -71606442 + LTR8 LTR ERV1 546 691 0 1982 139 19 13 chr10 73983412 73983722 -71605566 + AluSx SINE Alu 1 312 0 181 200 233 0 chr10 73983825 73983885 -71605403 - MIR SINE MIR -124 138 65 475 125 102 0 chr10 73983922 73984010 -71605278 - MER33 DNA MER1_type -1 323 227 583 184 70 9 chr10 73984010 73984124 -71605164 - FRAM SINE Alu -20 156 36 815 202 17 84 chr10 73984126 73984197 -71605091 - MER33 DNA MER1_type -2363 222 148 1825 164 7 20 chr10 73984197 73984496 -71604792 - AluJo SINE Alu -17 295 1 815 202 17 84 chr10 73984496 73984662 -71604626 - MER33 DNA MER1_type -2437 148 1 1037 201 59 90 chr10 73984746 73984909 -71604379 - MER39 LTR ERV1 -1 687 520 2302 119 3 0 chr10 73984909 73985220 -71604068 + AluSx SINE Alu 1 312 0 1037 201 59 90 chr10 73985220 73985499 -71603789 - MER39 LTR ERV1 -168 520 67 207 333 53 18 chr10 73985602 73985716 -71603572 + MIR SINE MIR 32 149 -59 331 316 8 38 chr10 73986403 73986536 -71602752 + MIR SINE MIR 17 145 -63 2838 158 9 44 chr10 73986577 73986628 -71602660 + L1MB7 LINE L1 5622 5673 -511 2458 100 0 0 chr10 73986628 73986937 -71602351 + AluSc SINE Alu 1 309 0 2838 158 9 44 chr10 73986937 73987449 -71601839 + L1MB7 LINE L1 5673 6165 -19 271 340 39 10 chr10 73987540 73987643 -71601645 + MIR SINE MIR 151 256 -6 588 297 81 34 chr10 73988326 73988793 -71600495 + L1ME3A LINE L1 5452 5937 -233 2011 116 55 17 chr10 73988795 73989088 -71600200 + AluSx SINE Alu 1 304 -8 245 61 0 0 chr10 73990496 73990529 -71598759 + Alu SINE Alu 93 125 -41 25 0 0 0 chr10 73991856 73991881 -71597407 + AT_rich Low_complexity Low_complexity 1 25 0 2488 71 7 0 chr10 73991881 73992177 -71597111 + AluSp SINE Alu 1 298 -15 2354 104 3 0 chr10 73992237 73992535 -71596753 + AluSg SINE Alu 1 299 -11 808 217 49 44 chr10 73992596 73992822 -71596466 + AluJo SINE Alu 86 312 0 691 129 0 0 chr10 73993307 73993408 -71595880 - FLAM_C SINE Alu -7 136 36 374 275 46 9 chr10 73993460 73993569 -71595719 - L2 LINE L2 -2 3311 3199 2058 108 51 10 chr10 73993580 73993875 -71595413 + AluSx SINE Alu 1 307 -5 2552 65 0 3 chr10 73994316 73994622 -71594666 - AluY SINE Alu -6 305 1 1158 133 6 0 chr10 73994627 73994793 -71594495 - AluSq SINE Alu -10 303 137 1925 133 0 36 chr10 73994798 73995100 -71594188 - AluSx SINE Alu -13 299 9 2199 113 0 3 chr10 73995112 73995405 -71593883 - AluSg SINE Alu -18 292 1 1396 89 5 45 chr10 73996037 73996239 -71593049 - AluSg SINE Alu -116 194 1 425 184 13 0 chr10 73996241 73996340 -71592948 + AluSg/x SINE Alu 206 305 0 386 228 111 25 chr10 73996434 73996596 -71592692 + HAL1 LINE L1 790 965 -1542 2001 158 0 0 chr10 73996627 73996924 -71592364 - AluJb SINE Alu -15 297 1 1804 172 7 7 chr10 73997792 73998094 -71591194 - AluJo SINE Alu -10 302 1 248 289 133 16 chr10 73998731 73998859 -71590429 - MIR SINE MIR -17 245 103 337 240 160 10 chr10 73999083 73999183 -71590105 - L2 LINE L2 -3 3269 3155 * 439 280 83 24 chr10 73999168 73999336 -71589952 + L2 LINE L2 3136 3313 0 207 88 0 0 chr10 73999565 73999599 -71589689 + (CA)n Simple_repeat Simple_repeat 2 35 0 28 48 0 0 chr10 73999670 73999712 -71589576 + AT_rich Low_complexity Low_complexity 1 42 0 470 267 192 0 chr10 74000434 74000580 -71588708 - MER5A DNA MER1_type -6 183 10 1664 154 51 17 chr10 74001145 74001438 -71587850 + AluJb SINE Alu 1 303 -9 347 137 0 0 chr10 74001496 74001547 -71587741 + MER66A LTR ERV1 287 337 -141 2438 84 0 0 chr10 74001737 74002034 -71587254 - AluSg SINE Alu -13 297 1 331 271 56 9 chr10 74002070 74002177 -71587111 + MIR SINE MIR 33 144 -118 279 0 0 0 chr10 74002719 74002750 -71586538 + (TCCA)n Simple_repeat Simple_repeat 1 31 0 2361 92 0 3 chr10 74002926 74003219 -71586069 + AluSx SINE Alu 1 292 -20 1022 159 0 0 chr10 74003233 74003378 -71585910 + FRAM SINE Alu 12 156 -20 2015 148 10 0 chr10 74003690 74003988 -71585300 + AluSx SINE Alu 1 301 -11 694 162 43 8 chr10 74004199 74004316 -71584972 - FLAM_C SINE Alu -16 127 7 370 287 77 59 chr10 74004715 74004815 -71584473 + L1ME4a LINE L1 5593 5690 -431 2407 72 7 0 chr10 74004815 74005120 -71584168 + AluSx SINE Alu 1 307 -5 370 287 77 59 chr10 74005120 74005343 -71583945 + L1ME4a LINE L1 5690 5922 -199 2246 124 0 0 chr10 74006460 74006759 -71582529 - AluSx SINE Alu -13 299 1 1609 164 74 30 chr10 74006759 74007057 -71582231 - AluJb SINE Alu -1 311 1 232 303 56 11 chr10 74007090 74007179 -71582109 + MIR3 SINE MIR 10 102 -106 2423 82 0 0 chr10 74007537 74007831 -71581457 - AluSq SINE Alu -19 294 1 2376 78 7 16 chr10 74009058 74009366 -71579922 + AluSq SINE Alu 1 305 -8 1765 197 7 0 chr10 74009566 74009875 -71579413 - AluJb SINE Alu -1 311 1 354 290 122 0 chr10 74009876 74009983 -71579305 - MIR SINE MIR -115 147 28 1094 117 0 0 chr10 74010095 74010240 -71579048 - AluSg/x SINE Alu -6 306 162 230 153 0 119 chr10 74010625 74010684 -71578604 - FLAM_A SINE Alu -9 124 73 663 156 0 0 chr10 74010692 74010788 -71578500 - FLAM_A SINE Alu -46 96 1 2221 115 0 23 chr10 74010818 74011122 -71578166 + AluSx SINE Alu 1 297 -15 197 194 28 0 chr10 74011420 74011456 -71577832 - MIR3 SINE MIR -39 169 133 501 234 211 0 chr10 74011901 74012029 -71577259 - MIR SINE MIR -106 156 2 228 210 70 77 chr10 74012981 74013124 -71576164 + HAL1 LINE L1 89 230 -2277 1841 160 6 26 chr10 74013247 74013559 -71575729 + AluSx SINE Alu 1 306 -6 7304 166 97 39 chr10 74013575 74015305 -71573983 + L1MC3 LINE L1 5934 7762 -23 2176 126 7 0 chr10 74015342 74015643 -71573645 + AluSq SINE Alu 1 303 -10 1409 97 128 0 chr10 74015656 74015852 -71573436 + AluSx SINE Alu 2 222 -90 426 119 0 48 chr10 74015852 74015936 -71573352 - AluS SINE Alu 0 310 231 439 63 0 48 chr10 74016036 74016099 -71573189 - AluJ/FLAM SINE Alu -251 61 2 2510 67 3 0 chr10 74016188 74016485 -71572803 + AluSp SINE Alu 1 298 -15 369 0 0 0 chr10 74016967 74017008 -71572280 + (TG)n Simple_repeat Simple_repeat 2 42 0 452 203 32 154 chr10 74017008 74017313 -71571975 - L1ME4a LINE L1 -6 6115 5849 289 318 26 66 chr10 74017463 74017614 -71571674 + MIR3 SINE MIR 17 161 -47 813 167 0 0 chr10 74017799 74017931 -71571357 - FLAM_A SINE Alu 0 133 2 2952 6 0 0 chr10 74018053 74018365 -71570923 - AluYb8 SINE Alu -6 312 1 325 293 19 19 chr10 74018375 74018481 -71570807 - MIR SINE MIR -73 189 84 248 284 49 20 chr10 74018543 74018645 -71570643 + L3b LINE CR1 1130 1234 -349 785 179 93 0 chr10 74019456 74019607 -71569681 - FRAM SINE Alu -1 165 1 1044 158 0 55 chr10 74019864 74020047 -71569241 + FAM SINE Alu 1 47 -2 621 308 55 56 chr10 74020583 74021169 -71568119 - L2 LINE L2 0 3313 2717 2205 122 0 3 chr10 74021169 74021473 -71567815 - AluSx SINE Alu -9 303 1 621 308 55 56 chr10 74021473 74021629 -71567659 - L2 LINE L2 -596 2717 2562 195 42 0 0 chr10 74022114 74022138 -71567150 + (A)n Simple_repeat Simple_repeat 1 24 0 523 184 104 61 chr10 74022150 74022313 -71566975 - L1MB8 LINE L1 -6 6172 6003 2040 164 0 0 chr10 74023172 74023484 -71565804 - AluSx SINE Alu 0 312 1 218 336 94 16 chr10 74023487 74023615 -71565673 - MIR SINE MIR -82 180 43 1074 172 10 0 chr10 74023828 74024020 -71565268 - L1MC4 LINE L1 -1036 7006 6813 1751 166 3 37 chr10 74024223 74024519 -71564769 + AluJb SINE Alu 3 288 -24 2352 96 0 7 chr10 74024597 74024889 -71564399 - AluSg SINE Alu -20 290 1 1575 184 56 0 chr10 74024990 74025297 -71563991 + AluJo SINE Alu 1 322 0 973 295 19 8 chr10 74026643 74026901 -71562387 + MIR SINE MIR 2 262 0 224 214 54 0 chr10 74027520 74027576 -71561712 + (TCCA)n Simple_repeat Simple_repeat 2 60 0 191 238 0 0 chr10 74027576 74027618 -71561670 - L2 LINE L2 0 3313 3272 326 276 49 57 chr10 74029015 74029138 -71560150 - MIR SINE MIR -71 191 70 2534 70 0 13 chr10 74029170 74029484 -71559804 - AluY SINE Alu -1 310 1 239 254 225 42 chr10 74029567 74029709 -71559579 - MIR3 SINE MIR -20 188 21 2464 96 0 3 chr10 74030769 74031081 -71558207 - AluSq SINE Alu -2 311 1 1527 159 35 0 chr10 74031088 74031378 -71557910 - L1M4 LINE L1 -1404 4742 4443 1032 147 13 0 chr10 74031514 74031670 -71557618 + AluJb SINE Alu 135 292 -20 2497 80 0 0 chr10 74031721 74032022 -71557266 - AluSx SINE Alu -11 301 1 2407 82 0 0 chr10 74033265 74033557 -71555731 + AluSc SINE Alu 1 292 -17 1694 202 0 13 chr10 74033565 74033877 -71555411 + AluJb SINE Alu 1 308 -4 1409 172 4 13 chr10 74035262 74035569 -71553719 + AluJo SINE Alu 6 310 0 1660 186 3 7 chr10 74035721 74036012 -71553276 + AluJo SINE Alu 1 290 -22 1739 172 4 0 chr10 74037547 74037841 -71551447 + AluJo SINE Alu 13 307 0 22 35 0 0 chr10 74038435 74038464 -71550824 + AT_rich Low_complexity Low_complexity 1 29 0 2019 130 3 32 chr10 74038885 74039193 -71550095 - AluSx SINE Alu -13 299 1 400 238 7 56 chr10 74039264 74039356 -71549932 + L1ME LINE L1 5594 5678 -443 1810 171 0 13 chr10 74039356 74039654 -71549634 + AluJo SINE Alu 1 294 -18 400 238 7 56 chr10 74039654 74039704 -71549584 + L1ME LINE L1 5678 5729 -392 23 33 0 0 chr10 74039969 74039999 -71549289 + AT_rich Low_complexity Low_complexity 1 30 0 785 241 34 38 chr10 74040313 74040550 -71548738 - MIR SINE MIR -7 255 20 369 161 25 37 chr10 74040550 74040631 -71548657 - FLAM_A SINE Alu 0 133 54 1329 188 14 61 chr10 74040633 74040791 -71548497 - AluJo SINE Alu -33 279 140 1910 102 0 4 chr10 74040791 74041045 -71548243 + AluSc SINE Alu 39 291 -18 1329 188 14 61 chr10 74041045 74041179 -71548109 - AluJo SINE Alu -172 140 1 1131 171 174 16 chr10 74041692 74041950 -71547338 + AluSg SINE Alu 1 299 -1 1713 178 0 23 chr10 74042390 74042694 -71546594 + AluJo SINE Alu 1 297 -15 310 287 59 0 chr10 74042705 74042841 -71546447 + L1MB8 LINE L1 5692 5835 -327 2344 92 3 7 chr10 74043296 74043600 -71545688 + AluSp SINE Alu 1 303 -10 2124 112 14 0 chr10 74043876 74044170 -71545118 + AluSc SINE Alu 1 298 -11 536 252 18 0 chr10 74044455 74044566 -71544722 + MER81 DNA DNA 2 114 0 1583 235 52 2 chr10 74044566 74044971 -71544317 + L1MC4 LINE L1 7478 7902 -140 776 188 11 54 chr10 74045379 74045457 -71543831 + MER104 DNA MER2_type 3 83 -1815 2612 60 0 0 chr10 74045457 74045759 -71543529 + AluY SINE Alu 1 302 -9 776 188 11 54 chr10 74045759 74045866 -71543422 + MER104 DNA MER2_type 83 180 0 499 306 91 52 chr10 74046522 74046604 -71542684 + L1MEc LINE L1 23 100 -6296 2253 113 0 0 chr10 74046604 74046904 -71542384 + AluSx SINE Alu 1 300 -12 499 306 91 52 chr10 74046904 74047379 -71541909 + L1MEc LINE L1 100 602 -5794 739 201 6 30 chr10 74047887 74048056 -71541232 + FRAM SINE Alu 2 166 0 240 35 0 0 chr10 74049048 74049077 -71540211 + (T)n Simple_repeat Simple_repeat 1 29 0 2424 73 3 0 chr10 74049603 74049906 -71539382 + AluY SINE Alu 1 304 -7 420 241 289 0 chr10 74050162 74050328 -71538960 + L3 LINE CR1 1277 1490 -87 324 0 0 0 chr10 74050750 74050786 -71538502 + (TG)n Simple_repeat Simple_repeat 2 37 0 2255 95 3 23 chr10 74050852 74051156 -71538132 - AluSp SINE Alu -15 298 1 1311 184 10 71 chr10 74051386 74051695 -71537593 + L1MB8 LINE L1 5865 6154 -24 1936 146 0 13 chr10 74051705 74052006 -71537282 - AluJb SINE Alu -15 297 1 559 267 176 44 chr10 74052012 74052581 -71536707 - L2 LINE L2 -609 2705 2062 581 172 22 67 chr10 74052972 74053106 -71536182 + L1MB2 LINE L1 6001 6128 -43 2033 164 0 0 chr10 74053108 74053418 -71535870 + AluJo SINE Alu 1 310 -2 41 48 0 0 chr10 74053439 74053501 -71535787 + AT_rich Low_complexity Low_complexity 1 62 0 1494 189 163 12 chr10 74053510 74053854 -71535434 + MSTD LTR MaLR 1 396 0 1983 124 0 4 chr10 74055977 74056243 -71533045 - AluSx SINE Alu -46 266 2 1680 169 16 29 chr10 74056416 74056548 -71532740 + AluJo SINE Alu 3 135 -177 2462 63 7 3 chr10 74056548 74056848 -71532440 + AluY SINE Alu 1 301 -10 1680 169 16 29 chr10 74056848 74057022 -71532266 + AluJo SINE Alu 135 305 -7 840 165 0 15 chr10 74057038 74057158 -71532130 + FLAM_C SINE Alu 2 121 -181 402 39 0 0 chr10 74057158 74057210 -71532078 + (TG)n Simple_repeat Simple_repeat 2 53 0 840 165 0 15 chr10 74057210 74057222 -71532066 + FLAM_C SINE Alu 121 132 -170 480 318 122 14 chr10 74057632 74057846 -71531442 + MIR SINE MIR 8 244 -18 2186 120 3 0 chr10 74058207 74058506 -71530782 + AluSx SINE Alu 1 300 -12 935 217 43 4 chr10 74058518 74058748 -71530540 - L1MB3 LINE L1 -1 6182 5944 334 253 11 0 chr10 74058748 74058839 -71530449 + MIR SINE MIR 94 185 -77 2239 128 0 0 chr10 74059819 74060124 -71529164 + AluSx SINE Alu 1 305 -7 642 299 54 38 chr10 74060129 74060573 -71528715 - L1ME4a LINE L1 -3 6118 5668 2247 125 3 3 chr10 74060609 74060920 -71528368 + AluSx SINE Alu 1 311 -1 207 0 0 0 chr10 74061486 74061509 -71527779 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 251 284 63 0 chr10 74062329 74062424 -71526864 + MIR3 SINE MIR 60 160 -48 234 132 57 19 chr10 74062562 74062615 -71526673 + MIR3 SINE MIR 153 207 -1 213 39 0 0 chr10 74062649 74062675 -71526613 + (ATG)n Simple_repeat Simple_repeat 3 28 0 395 247 176 12 chr10 74062688 74062902 -71526386 - MIR SINE MIR -12 250 2 208 262 131 82 chr10 74063150 74063272 -71526016 + MER91B DNA MER1_type 2 129 -61 244 256 174 0 chr10 74063290 74063376 -71525912 + MER91B DNA MER1_type 90 190 0 2361 117 117 8 chr10 74063747 74064131 -71525157 - MSTA LTR MaLR -2 426 1 510 171 0 23 chr10 74064174 74064262 -71525026 - MER58B DNA MER1_type -1 340 255 217 297 152 22 chr10 74065117 74065255 -71524033 - MIR SINE MIR -80 182 27 2194 215 75 36 chr10 74065643 74066373 -71522915 - L1MC5 LINE L1 -115 7846 7088 276 273 108 43 chr10 74066349 74066580 -71522708 - L1MB3 LINE L1 -265 5856 5611 * 1748 140 0 101 chr10 74067247 74067583 -71521705 - AluJb SINE Alu 0 302 1 310 287 19 28 chr10 74067791 74067899 -71521389 + MIR SINE MIR 80 186 -76 403 283 114 46 chr10 74067992 74068083 -71521205 - L1ME4a LINE L1 -1 6120 6037 1801 100 115 0 chr10 74068083 74068343 -71520945 + AluSq SINE Alu 7 296 -17 403 283 114 46 chr10 74068343 74068382 -71520906 - L1ME4a LINE L1 -84 6037 6002 405 0 0 0 chr10 74068382 74068427 -71520861 + (TG)n Simple_repeat Simple_repeat 2 46 0 403 283 114 46 chr10 74068427 74068562 -71520726 - L1ME4a LINE L1 -119 6002 5878 1681 184 28 0 chr10 74068562 74068850 -71520438 - AluJo SINE Alu -16 296 1 403 283 114 46 chr10 74068850 74068950 -71520338 - L1ME4a LINE L1 -243 5878 5728 440 294 41 30 chr10 74070133 74070330 -71518958 + MIR SINE MIR 14 212 -50 1380 134 68 104 chr10 74070356 74070663 -71518625 + AluJo SINE Alu 1 296 -16 365 302 73 62 chr10 74071813 74072088 -71517200 - L3 LINE CR1 -18 1559 1282 1614 200 6 19 chr10 74072346 74072661 -71516627 + AluJo SINE Alu 1 311 -1 330 47 62 31 chr10 74072666 74072730 -71516558 + GA-rich Low_complexity Low_complexity 1 66 0 2142 115 0 30 chr10 74072867 74073171 -71516117 + AluSx SINE Alu 1 295 -17 1884 157 3 19 chr10 74073316 74073629 -71515659 - AluJb SINE Alu -4 308 1 797 173 0 0 chr10 74074326 74074459 -71514829 - FLAM_A SINE Alu 0 133 1 2181 110 10 7 chr10 74074483 74074782 -71514506 + AluSx SINE Alu 1 300 -12 239 318 45 0 chr10 74074954 74075064 -71514224 + L2 LINE L2 3167 3281 -32 198 0 0 0 chr10 74075080 74075102 -71514186 + (TGAA)n Simple_repeat Simple_repeat 1 22 0 202 379 39 10 chr10 74075221 74075324 -71513964 - L2 LINE L2 -40 3232 3127 1526 203 41 78 chr10 74075435 74075662 -71513626 - Charlie4a DNA MER1_type -1473 488 254 2385 90 0 3 chr10 74075662 74075961 -71513327 - AluY SINE Alu -13 298 1 1526 203 41 78 chr10 74075961 74076042 -71513246 - Charlie4a DNA MER1_type -1707 254 172 2298 114 3 0 chr10 74076042 74076348 -71512940 - AluSq SINE Alu -6 307 1 1526 203 41 78 chr10 74076348 74076501 -71512787 - Charlie4a DNA MER1_type -1789 172 43 1308 266 50 79 chr10 74076616 74077200 -71512088 - L1MCc LINE L1 -4681 2441 1842 2175 103 3 55 chr10 74077200 74077391 -71511897 - AluSx SINE Alu 0 312 113 222 37 0 0 chr10 74077391 74077418 -71511870 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2119 110 0 3 chr10 74077418 74077700 -71511588 - AluY SINE Alu -30 281 1 2175 103 3 55 chr10 74077700 74077836 -71511452 - AluSx SINE Alu -197 115 1 1308 266 50 79 chr10 74077836 74078321 -71510967 - L1MCc LINE L1 -5280 1842 1180 672 167 0 0 chr10 74078346 74078448 -71510840 + AluJ/FLAM SINE Alu 1 102 -210 30 27 0 0 chr10 74078458 74078495 -71510793 + AT_rich Low_complexity Low_complexity 1 37 0 2075 122 28 0 chr10 74078502 74078788 -71510500 + AluSx SINE Alu 3 296 -16 984 93 0 43 chr10 74079423 74079562 -71509726 + FLAM_C SINE Alu 1 133 -10 21 0 0 0 chr10 74079562 74079583 -71509705 + AT_rich Low_complexity Low_complexity 1 21 0 600 270 86 64 chr10 74079595 74079682 -71509606 - L1M4 LINE L1 -3271 2875 2791 882 236 103 0 chr10 74079682 74079885 -71509403 - MER58A DNA MER1_type 0 224 1 600 270 86 64 chr10 74079885 74079992 -71509296 - L1M4 LINE L1 -3355 2791 2688 2414 97 3 3 chr10 74079992 74080303 -71508985 + AluSq SINE Alu 1 311 -2 243 88 0 0 chr10 74080303 74080337 -71508951 + (TA)n Simple_repeat Simple_repeat 2 35 0 600 270 86 64 chr10 74080337 74080548 -71508740 - L1M4 LINE L1 -3457 2689 2459 2228 117 0 0 chr10 74080561 74080852 -71508436 + AluSx SINE Alu 1 291 -21 251 191 56 22 chr10 74080873 74080962 -71508326 + (TTAA)n Simple_repeat Simple_repeat 2 93 0 555 276 38 5 chr10 74081260 74081470 -71507818 - HAL1 LINE L1 -864 1643 1427 1992 142 3 3 chr10 74081470 74081772 -71507516 + AluJb SINE Alu 1 302 -10 2388 82 3 0 chr10 74081936 74082230 -71507058 + AluSq SINE Alu 1 295 -18 2194 85 34 20 chr10 74084307 74084600 -71504688 - AluY SINE Alu -14 297 1 2008 170 31 11 chr10 74084657 74085015 -71504273 + MLT1A1 LTR MaLR 1 365 0 1044 166 11 0 chr10 74085328 74085509 -71503779 - MER5A DNA MER1_type -4 185 3 216 135 0 0 chr10 74085597 74085634 -71503654 + (TCC)n Simple_repeat Simple_repeat 3 39 0 278 220 50 40 chr10 74085773 74085873 -71503415 + L2 LINE L2 3117 3217 -96 205 360 122 0 chr10 74086245 74086409 -71502879 + MIR SINE MIR 47 230 -32 205 274 0 0 chr10 74086424 74086475 -71502813 + (CAT)n Simple_repeat Simple_repeat 1 51 0 2393 80 6 29 chr10 74087018 74087330 -71501958 + AluSq SINE Alu 1 305 -8 2012 135 0 25 chr10 74087348 74087667 -71501621 + AluJo SINE Alu 1 311 -1 2247 106 0 55 chr10 74087682 74088012 -71501276 + AluSx SINE Alu 1 312 0 268 274 88 53 chr10 74088046 74088159 -71501129 - MIR3 SINE MIR -34 174 58 608 215 154 30 chr10 74088343 74088576 -71500712 + MIR SINE MIR 1 262 0 623 182 0 0 chr10 74088715 74088825 -71500463 + AluJo/FLAM SINE Alu 1 110 -202 857 209 0 0 chr10 74088827 74088985 -71500303 - AluJo/FRAM SINE Alu -7 295 138 1438 97 0 0 chr10 74088988 74089173 -71500115 - AluY SINE Alu 0 311 127 674 95 0 0 chr10 74089277 74089372 -71499916 + AluY SINE Alu 194 288 -23 1815 174 13 0 chr10 74090157 74090455 -71498833 + AluJo SINE Alu 1 302 -10 2216 101 3 23 chr10 74090488 74090796 -71498492 - AluSq SINE Alu -11 302 1 255 86 0 0 chr10 74090955 74090990 -71498298 - THE1C LTR MaLR 0 428 394 2120 108 11 52 chr10 74091055 74091417 -71497871 - THE1C LTR MaLR -28 347 1 1350 174 36 12 chr10 74091451 74091747 -71497541 + L1MB7 LINE L1 5897 6163 -21 1613 160 0 52 chr10 74091806 74092094 -71497194 + AluJo SINE Alu 9 281 -31 740 181 6 104 chr10 74092271 74092453 -71496835 + FRAM SINE Alu 2 165 -1 1991 85 15 4 chr10 74092725 74093007 -71496281 - AluSx SINE Alu 0 305 21 2197 129 3 3 chr10 74093403 74093713 -71495575 - AluSx SINE Alu -2 310 1 746 138 7 43 chr10 74093723 74093861 -71495427 - FLAM_C SINE Alu 0 133 1 2201 129 0 3 chr10 74094431 74094741 -71494547 - AluSq SINE Alu -4 309 1 534 251 48 24 chr10 74095417 74095584 -71493704 - MIR SINE MIR -81 181 11 1922 170 0 7 chr10 74096061 74096367 -71492921 - AluJo SINE Alu -8 304 1 694 230 149 113 chr10 74097484 74097846 -71491442 - MLT1H LTR MaLR 0 549 161 2743 39 0 0 chr10 74097846 74098155 -71491133 - AluY SINE Alu -2 309 1 694 230 149 113 chr10 74098155 74098322 -71490966 - MLT1H LTR MaLR -388 161 1 1803 148 31 10 chr10 74098435 74098569 -71490719 + AluJb SINE Alu 2 132 -180 2037 122 3 21 chr10 74098569 74098877 -71490411 + AluSx SINE Alu 1 303 0 1803 148 31 10 chr10 74098877 74099006 -71490282 + AluJb SINE Alu 132 275 -37 276 30 0 0 chr10 74099006 74099039 -71490249 + (GA)n Simple_repeat Simple_repeat 2 34 0 1803 148 31 10 chr10 74099039 74099064 -71490224 + AluJb SINE Alu 275 298 -14 395 335 58 21 chr10 74099235 74099423 -71489865 + L2 LINE L2 3074 3268 -4 250 272 68 48 chr10 74100606 74100753 -71488535 - L2 LINE L2 -225 3047 2898 2426 142 11 32 chr10 74100994 74101437 -71487851 - Tigger2a DNA MER2_type 0 434 1 750 258 9 109 chr10 74101510 74101606 -71487682 + Charlie7 DNA MER1_type 242 346 -2266 2274 125 0 3 chr10 74101606 74101911 -71487377 + AluSx SINE Alu 1 304 -8 750 258 9 109 chr10 74101911 74101922 -71487366 + Charlie7 DNA MER1_type 346 357 -2255 2523 81 0 0 chr10 74101922 74102229 -71487059 + AluSq SINE Alu 1 307 -6 750 258 9 109 chr10 74102229 74102342 -71486946 + Charlie7 DNA MER1_type 357 422 -2190 1670 197 14 7 chr10 74102342 74102637 -71486651 + AluJo SINE Alu 4 300 -12 750 258 9 109 chr10 74102637 74102744 -71486544 + Charlie7 DNA MER1_type 422 538 -2074 1237 153 0 0 chr10 74102863 74103052 -71486236 - AluSg/x SINE Alu -3 307 119 901 216 97 58 chr10 74103052 74103115 -71486173 - L1ME3 LINE L1 -2 6160 6101 1682 160 14 27 chr10 74103115 74103266 -71486022 - AluJo SINE Alu -22 290 138 331 19 19 38 chr10 74103266 74103319 -71485969 + (TTTG)n Simple_repeat Simple_repeat 1 52 0 2291 72 7 0 chr10 74103319 74103596 -71485692 - AluSg SINE Alu -31 279 1 2194 125 0 0 chr10 74103596 74103892 -71485396 - AluSg SINE Alu -13 297 1 1682 160 14 27 chr10 74103892 74104032 -71485256 - AluJo SINE Alu -171 141 1 901 216 97 58 chr10 74104032 74104310 -71484978 - L1ME3 LINE L1 -61 6101 5806 2458 165 25 85 chr10 74104785 74104895 -71484393 + L1M4 LINE L1 4218 4333 -1813 2335 94 0 10 chr10 74104895 74105194 -71484094 + AluSg1 SINE Alu 1 296 -13 2458 165 25 85 chr10 74105194 74105274 -71484014 + L1M4 LINE L1 4333 4416 -1730 2015 118 0 0 chr10 74105274 74105536 -71483752 + AluSx SINE Alu 51 312 0 2458 165 25 85 chr10 74105536 74105896 -71483392 + L1M4 LINE L1 4416 4725 -1421 2303 103 0 3 chr10 74105896 74106187 -71483101 + AluSq SINE Alu 1 290 -23 2458 165 25 85 chr10 74106187 74106305 -71482983 + L1M4 LINE L1 4725 4848 -1298 1062 64 0 0 chr10 74106312 74106437 -71482851 - AluY SINE Alu -17 294 170 316 125 18 0 chr10 74106440 74106496 -71482792 + L1M4 LINE L1 4853 4909 -1237 1188 162 0 33 chr10 74106497 74106707 -71482581 + AluJb SINE Alu 99 301 -11 226 330 19 19 chr10 74106742 74106845 -71482443 - L2 LINE L2 -770 2544 2442 449 290 43 0 chr10 74106865 74107003 -71482285 + L2 LINE L2 2954 3097 -216 390 216 0 36 chr10 74107008 74107119 -71482169 - MLT1J LTR MaLR 0 511 405 229 275 118 14 chr10 74107319 74107442 -71481846 - MIR SINE MIR -67 141 30 2442 81 0 7 chr10 74108055 74108350 -71480938 + AluSc SINE Alu 1 293 -16 2407 89 3 0 chr10 74110410 74110712 -71478576 - AluSp SINE Alu -10 303 1 2404 78 3 16 chr10 74110859 74111166 -71478122 - AluSq SINE Alu -10 303 1 542 195 149 7 chr10 74111282 74111436 -71477852 - MIR SINE MIR -77 185 10 206 265 31 82 chr10 74111545 74111643 -71477645 + MIR SINE MIR 120 212 -50 516 150 0 0 chr10 74112897 74113010 -71476278 + (TG)n Simple_repeat Simple_repeat 2 114 0 358 243 84 9 chr10 74114089 74114196 -71475092 + MIR SINE MIR 77 191 -71 38 0 0 20 chr10 74114454 74114480 -71474808 + AT_rich Low_complexity Low_complexity 1 27 -21 2092 131 0 10 chr10 74114480 74114771 -71474517 - AluSx SINE Alu -24 288 1 38 0 0 20 chr10 74114771 74114793 -71474495 + AT_rich Low_complexity Low_complexity 27 48 0 811 164 0 0 chr10 74114793 74114909 -71474379 - FLAM_C SINE Alu -22 121 6 1853 178 3 0 chr10 74115378 74115682 -71473606 - AluJb SINE Alu -7 305 1 1913 147 39 0 chr10 74115691 74115977 -71473311 - AluJb SINE Alu -15 297 1 1988 95 16 0 chr10 74116121 74116374 -71472914 + AluSx SINE Alu 35 291 -21 318 67 0 0 chr10 74116384 74116429 -71472859 + (CAAA)n Simple_repeat Simple_repeat 2 46 0 251 260 195 13 chr10 74116628 74116782 -71472506 - L2 LINE L2 -231 3041 2860 244 338 69 14 chr10 74116818 74116963 -71472325 - L2 LINE L2 -557 2757 2605 208 286 0 16 chr10 74117045 74117108 -71472180 + L2 LINE L2 3211 3272 0 462 244 284 5 chr10 74117475 74117676 -71471612 - MIR SINE MIR 0 262 6 234 206 162 0 chr10 74117801 74117869 -71471419 - MIR3 SINE MIR -18 190 112 186 167 0 0 chr10 74118275 74118311 -71470977 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 345 145 0 0 chr10 74118332 74118394 -71470894 + (TCCA)n Simple_repeat Simple_repeat 2 63 0 221 272 233 10 chr10 74118398 74118501 -71470787 - L2 LINE L2 0 3272 3147 881 112 64 0 chr10 74120762 74120887 -71468401 - FLAM_C SINE Alu -10 133 1 970 187 84 52 chr10 74121080 74121246 -71468042 - LTR29 LTR ERV1 0 644 485 2007 105 94 7 chr10 74121246 74121532 -71467756 - AluSx SINE Alu -1 311 1 970 187 84 52 chr10 74121532 74121661 -71467627 - LTR29 LTR ERV1 -159 485 362 2397 86 7 0 chr10 74121661 74121953 -71467335 - AluSg SINE Alu -14 296 3 970 187 84 52 chr10 74121953 74122100 -71467188 - LTR29 LTR ERV1 -282 362 137 384 236 30 9 chr10 74122082 74122198 -71467090 - MER34 LTR ERV1 -416 126 11 * 2388 81 20 0 chr10 74122750 74123047 -71466241 + AluSq SINE Alu 1 303 -10 463 259 19 50 chr10 74123378 74123577 -71465711 + MIR SINE MIR 6 192 -65 1620 122 122 32 chr10 74173845 74174189 -71415099 - THE1C LTR MaLR 0 375 1 195 288 12 62 chr10 74174462 74174542 -71414746 + L2 LINE L2 3200 3275 -38 207 289 0 36 chr10 74175938 74176021 -71413267 + C-rich Low_complexity Low_complexity 2 81 0 * 236 322 11 33 chr10 74175962 74176145 -71413143 + CT-rich Low_complexity Low_complexity 1 179 0 225 202 12 24 chr10 74176175 74176259 -71413029 + CT-rich Low_complexity Low_complexity 1 83 0 245 206 0 16 chr10 74177580 74177643 -71411645 + T-rich Low_complexity Low_complexity 4 65 0 2819 245 48 25 chr10 74177649 74178396 -71410892 - L1PA13 LINE L1 -4861 1926 1163 214 204 37 0 chr10 74179127 74179181 -71410107 + MIR SINE MIR 86 141 -67 511 224 77 14 chr10 74179522 74179665 -71409623 + MER3 DNA MER1_type 57 208 -1 231 235 20 0 chr10 74179629 74179680 -71409608 - MER3 DNA MER1_type -124 85 34 * 1705 143 75 0 chr10 74179752 74180017 -71409271 + AluSc SINE Alu 1 285 -24 1048 105 0 0 chr10 74180818 74180951 -71408337 - FLAM_C SINE Alu -10 133 1 1412 144 7 15 chr10 74180951 74181221 -71408067 + L1MB8 LINE L1 5906 6173 -5 2299 134 15 41 chr10 74181681 74181778 -71407510 + L1MB4 LINE L1 5729 5827 -353 2350 109 0 3 chr10 74181778 74182082 -71407206 + AluSq SINE Alu 1 303 -10 2299 134 15 41 chr10 74182082 74182099 -71407189 + L1MB4 LINE L1 5827 5843 -337 825 205 0 24 chr10 74182099 74182265 -71407023 + FRAM SINE Alu 4 165 -1 2299 134 15 41 chr10 74182265 74182613 -71406675 + L1MB4 LINE L1 5843 6180 0 1827 99 12 4 chr10 74185010 74185253 -71404035 - AluSp SINE Alu -7 306 62 29 0 0 0 chr10 74185421 74185450 -71403838 + AT_rich Low_complexity Low_complexity 1 29 0 790 168 8 0 chr10 74185450 74185575 -71403713 - FLAM_C SINE Alu -7 126 1 21 36 0 0 chr10 74185624 74185652 -71403636 + AT_rich Low_complexity Low_complexity 1 28 0 316 297 29 36 chr10 74186447 74186585 -71402703 + L3 LINE CR1 951 1087 -490 2036 150 0 0 chr10 74186591 74186877 -71402411 - AluJb SINE Alu -26 286 1 252 307 97 18 chr10 74186902 74187016 -71402272 + L3 LINE CR1 1385 1507 -70 1106 233 42 64 chr10 74187084 74187492 -71401796 + L1ME3A LINE L1 5766 6164 -6 195 261 159 14 chr10 74187499 74187568 -71401720 + L3b LINE CR1 1384 1462 -121 200 200 0 0 chr10 74188600 74188635 -71400653 + (TTCA)n Simple_repeat Simple_repeat 1 35 0 1222 160 191 0 chr10 74188793 74189024 -71400264 + AluJb SINE Alu 1 275 -37 2096 132 3 0 chr10 74189024 74189328 -71399960 - AluSx SINE Alu -7 305 1 659 203 47 20 chr10 74189328 74189476 -71399812 - MIR SINE MIR -38 224 73 232 321 18 18 chr10 74189665 74189774 -71399514 - MIR SINE MIR -76 132 24 208 174 22 0 chr10 74190098 74190144 -71399144 - L2 LINE L2 -19 3253 3207 294 274 85 52 chr10 74190506 74190659 -71398629 - MIR3 SINE MIR -21 187 30 2268 110 3 0 chr10 74192946 74193237 -71396051 - AluSx SINE Alu -20 292 1 594 304 11 5 chr10 74194558 74194749 -71394539 + MER46C DNA MER2_type 147 338 0 188 57 0 57 chr10 74195006 74195041 -71394247 + (TGGA)n Simple_repeat Simple_repeat 2 34 0 2051 128 98 18 chr10 74195127 74195464 -71393824 - THE1B LTR MaLR 0 364 1 436 292 62 37 chr10 74195887 74196048 -71393240 - MER5B DNA MER1_type -1 177 13 2212 116 10 3 chr10 74196048 74196358 -71392930 - AluSx SINE Alu 0 312 1 2053 137 7 3 chr10 74196779 74197079 -71392209 - AluJo SINE Alu -11 301 1 394 282 39 19 chr10 74197931 74198087 -71391201 + L3 LINE CR1 1270 1428 -149 1108 226 13 4 chr10 74198187 74198417 -71390871 + MIR SINE MIR 9 240 -22 242 302 116 31 chr10 74198422 74198551 -71390737 - MIR SINE MIR -22 240 101 1291 162 65 16 chr10 74199477 74199712 -71389576 + AluJo SINE Alu 54 303 -9 186 43 0 0 chr10 74199712 74199735 -71389553 + (CATA)n Simple_repeat Simple_repeat 2 24 0 1291 162 65 16 chr10 74199735 74199746 -71389542 + AluJo SINE Alu 303 312 0 283 246 77 112 chr10 74201483 74201768 -71387520 + L1M4 LINE L1 3995 4269 -1877 885 105 0 0 chr10 74201795 74201909 -71387379 - AluSq/x SINE Alu -198 114 1 21 0 0 0 chr10 74202334 74202355 -71386933 + AT_rich Low_complexity Low_complexity 1 21 0 253 89 89 18 chr10 74202433 74202489 -71386799 - L1MD3 LINE L1 -1 7994 7935 224 191 32 0 chr10 74202491 74202554 -71386734 + (TATG)n Simple_repeat Simple_repeat 2 66 0 244 303 28 0 chr10 74202566 74202675 -71386613 + L1M4 LINE L1 4381 4492 -1654 723 151 101 0 chr10 74203399 74203518 -71385770 + FLAM_C SINE Alu 2 132 -11 1445 159 67 7 chr10 74204210 74204480 -71384808 + AluJo SINE Alu 1 286 -26 1601 88 0 0 chr10 74204809 74205001 -71384287 - AluSq SINE Alu -115 198 7 248 269 75 0 chr10 74205146 74205239 -71384049 + L1ME4a LINE L1 6020 6119 -2 1950 125 59 7 chr10 74205261 74205549 -71383739 + AluJb SINE Alu 1 303 -9 819 156 8 0 chr10 74206210 74206332 -71382956 + FLAM_A SINE Alu 1 123 -10 1046 267 56 49 chr10 74206639 74207171 -71382117 - MLT1H LTR MaLR 0 549 14 286 271 271 47 chr10 74208263 74208499 -71380789 + L2 LINE L2 3023 3311 -2 206 244 0 0 chr10 74208572 74208613 -71380675 - L2 LINE L2 -90 3182 3142 193 308 32 32 chr10 74208642 74208798 -71380490 - L2 LINE L2 -283 2989 2834 226 255 75 93 chr10 74209139 74209314 -71379974 + MIR SINE MIR 10 183 -63 2196 96 10 7 chr10 74209655 74209973 -71379315 + AluSg SINE Alu 1 310 0 21 0 0 0 chr10 74210077 74210098 -71379190 + AT_rich Low_complexity Low_complexity 1 21 0 848 115 11 120 chr10 74210127 74210318 -71378970 + MER90 LTR ERV1 1 170 -405 * 926 187 19 74 chr10 74210312 74210449 -71378839 + MER90 LTR ERV1 370 513 -101 1674 163 11 0 chr10 74210449 74210713 -71378575 - AluJb SINE Alu -19 293 27 760 178 0 0 chr10 74210719 74210837 -71378451 - FLAM_C SINE Alu -15 118 1 926 187 19 74 chr10 74210837 74210949 -71378339 + MER90 LTR ERV1 518 612 -2 303 138 15 0 chr10 74210951 74211016 -71378272 - LTR37A LTR ERV1 -46 380 315 213 39 0 0 chr10 74211084 74211110 -71378178 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 1534 179 7 52 chr10 74211304 74211612 -71377676 + AluJb SINE Alu 1 294 -18 337 319 67 18 chr10 74211716 74211998 -71377290 - L1MC4a LINE L1 -1888 5920 5625 599 151 0 0 chr10 74213854 74213940 -71375348 + AluSg/x SINE Alu 103 188 -122 255 98 49 0 chr10 74213940 74213981 -71375307 + Alu SINE Alu 261 303 -5 * 744 262 103 40 chr10 74213971 74214322 -71374966 + MLT1J LTR MaLR 95 467 -44 1270 67 0 11 chr10 74214385 74214565 -71374723 + (TTC)n Simple_repeat Simple_repeat 3 180 0 1528 119 0 0 chr10 74214568 74214795 -71374493 - L1PB2 LINE L1 -36 6115 5889 306 269 124 38 chr10 74214828 74215014 -71374274 + L2 LINE L2 1838 2039 -1275 410 245 38 9 chr10 74215097 74215203 -71374085 + MER115 DNA AcHobo 322 430 -263 533 266 126 28 chr10 74215298 74215512 -71373776 - MIR SINE MIR -15 247 13 1863 158 58 19 chr10 74215721 74216081 -71373207 + MLT1A2 LTR MaLR 1 374 0 1401 170 229 14 chr10 74216170 74216523 -71372765 + MLT1C LTR MaLR 1 429 -38 1005 210 65 5 chr10 74216529 74216743 -71372545 + Tigger5 DNA MER2_type 1 227 -2096 1716 151 66 71 chr10 74216779 74216938 -71372350 + MLT1B LTR MaLR 1 159 -231 2189 127 3 0 chr10 74216938 74217237 -71372051 - AluSq SINE Alu -13 300 1 1716 151 66 71 chr10 74217237 74217469 -71371819 + MLT1B LTR MaLR 159 390 0 371 315 63 16 chr10 74217481 74217608 -71371680 + L2 LINE L2 3137 3269 -3 1101 234 95 78 chr10 74218332 74218931 -71370357 - L1MC5 LINE L1 -813 7148 6549 1721 181 0 7 chr10 74218941 74219239 -71370049 - AluJo SINE Alu -16 296 1 716 296 93 16 chr10 74219548 74219926 -71369362 - HAL1b LINE L1 -629 719 313 1628 176 37 9 chr10 74219931 74220255 -71369033 - MER21B LTR ERV1 -2 861 529 5622 151 20 3 chr10 74220266 74221993 -71367295 - L1PB1 LINE L1 0 6151 4398 686 236 10 15 chr10 74222047 74222242 -71367046 - L1PB1 LINE L1 -2120 4026 3833 1956 159 7 0 chr10 74222322 74222623 -71366665 - AluJb SINE Alu -9 303 1 351 0 0 0 chr10 74223080 74223119 -71366169 + (TA)n Simple_repeat Simple_repeat 1 39 0 * 378 0 0 0 chr10 74223118 74223160 -71366128 + (GA)n Simple_repeat Simple_repeat 2 43 0 1624 125 0 22 chr10 74223184 74223416 -71365872 - AluSx SINE Alu -85 227 1 625 291 91 53 chr10 74223624 74223819 -71365469 + MLT1J2 LTR MaLR 39 225 -225 2739 84 14 41 chr10 74223819 74224236 -71365052 + L1PB2 LINE L1 5742 6147 -4 625 291 91 53 chr10 74224236 74224435 -71364853 + MLT1J2 LTR MaLR 225 448 -2 385 127 0 0 chr10 74224486 74224549 -71364739 - L1MB8 LINE L1 0 6178 6116 3869 181 126 86 chr10 74224557 74225984 -71363304 + MER52A LTR ERV1 1 1755 0 3694 180 40 30 chr10 74225984 74226241 -71363047 - L1MB7 LINE L1 -71 6113 5860 1252 130 115 10 chr10 74226241 74226330 -71362958 - MER30 DNA MER1_type 0 230 152 2306 112 3 0 chr10 74226330 74226625 -71362663 - AluSp SINE Alu -17 296 1 1252 130 115 10 chr10 74226625 74226743 -71362545 - MER30 DNA MER1_type -78 152 1 3694 180 40 30 chr10 74226743 74227128 -71362160 - L1MB7 LINE L1 -324 5860 5459 1814 174 23 0 chr10 74227128 74227427 -71361861 - AluJb SINE Alu -6 306 1 3694 180 40 30 chr10 74227427 74227607 -71361681 - L1MB7 LINE L1 -725 5459 5282 489 300 60 78 chr10 74227616 74228016 -71361272 - L1PB1 LINE L1 -2643 3503 3111 2415 88 0 0 chr10 74228104 74228400 -71360888 - AluSx SINE Alu -16 296 1 733 169 8 15 chr10 74228431 74228561 -71360727 - FLAM_C SINE Alu -1 142 14 956 240 0 0 chr10 74228704 74228887 -71360401 + AluSg/x SINE Alu 117 299 -11 2372 172 105 24 chr10 74228887 74229427 -71359861 - L1MB8 LINE L1 -264 5914 5297 2475 91 0 0 chr10 74229427 74229735 -71359553 - AluSg SINE Alu -2 308 1 2372 172 105 24 chr10 74229735 74229871 -71359417 - L1MB8 LINE L1 -881 5297 5173 383 241 204 22 chr10 74230662 74230799 -71358489 + MER5A DNA MER1_type 18 179 -10 285 222 69 28 chr10 74230901 74230973 -71358315 - MER5C DNA MER1_type -204 120 46 1808 172 10 7 chr10 74231303 74231606 -71357682 + AluJb SINE Alu 1 304 -8 226 264 28 14 chr10 74231648 74231720 -71357568 + (TATG)n Simple_repeat Simple_repeat 2 74 0 470 233 107 85 chr10 74232827 74232919 -71356369 + MER113 DNA MER1_type? 19 107 -414 2404 95 3 0 chr10 74232919 74233223 -71356065 - AluSp SINE Alu -8 305 1 2094 109 22 0 chr10 74233233 74233537 -71355751 - AluSx SINE Alu 0 312 3 470 233 107 85 chr10 74233537 74233702 -71355586 + MER113 DNA MER1_type? 115 294 -227 752 95 0 29 chr10 74233727 74233832 -71355456 + FLAM_C SINE Alu 25 126 -17 186 133 0 0 chr10 74233832 74233862 -71355426 + (TAA)n Simple_repeat Simple_repeat 1 30 0 436 286 28 17 chr10 74233864 74234042 -71355246 + MER113 DNA MER1_type? 293 472 -49 277 273 74 70 chr10 74234388 74234630 -71354658 - L2 LINE L2 -20 3252 3010 510 178 58 111 chr10 74235167 74235238 -71354050 + MER20B DNA MER1_type 545 618 -165 2177 90 0 21 chr10 74235238 74235526 -71353762 + AluSg SINE Alu 1 282 -28 510 178 58 111 chr10 74235526 74235662 -71353626 + MER20B DNA MER1_type 618 741 -42 2025 167 3 0 chr10 74235932 74236243 -71353045 + AluSx SINE Alu 1 312 0 3740 141 34 18 chr10 74236313 74236613 -71352675 - L1MB3 LINE L1 -52 6131 5837 2340 102 3 13 chr10 74236613 74236927 -71352361 - AluSp SINE Alu -2 311 1 3740 141 34 18 chr10 74236927 74237305 -71351983 - L1MB3 LINE L1 -346 5837 5442 469 213 113 0 chr10 74237466 74237631 -71351657 + MIR SINE MIR 23 206 -56 869 252 198 25 chr10 74237774 74238414 -71350874 + L1ME4a LINE L1 5353 6103 -18 1946 156 3 7 chr10 74239171 74239472 -71349816 + AluJb SINE Alu 1 300 -12 425 248 38 30 chr10 74239677 74239810 -71349478 + MER94 DNA DNA 1 134 0 274 243 108 27 chr10 74239961 74240072 -71349216 + MIR SINE MIR 13 132 -130 423 110 123 0 chr10 74240135 74240208 -71349080 - AluJ/FLAM SINE Alu -229 83 2 303 183 42 14 chr10 74240763 74240834 -71348454 - Tigger5 DNA MER2_type 0 2323 2251 303 179 0 18 chr10 74240803 74240859 -71348429 - Tigger5 DNA MER2_type -2268 55 1 2162 107 0 0 chr10 74241942 74242213 -71347075 - AluSx SINE Alu -19 293 23 878 161 0 0 chr10 74242442 74242585 -71346703 - FLAM_C SINE Alu 0 143 1 1905 160 6 16 chr10 74243153 74243465 -71345823 + AluJo SINE Alu 1 309 -3 252 236 286 7 chr10 74243472 74243612 -71345676 - MIR SINE MIR -8 254 76 846 265 67 16 chr10 74243762 74244015 -71345273 + MER102b DNA MER1_type 27 292 -49 1838 164 40 74 chr10 74244378 74244824 -71344464 - MSTB1 LTR MaLR 0 432 2 400 281 20 128 chr10 74245180 74245525 -71343763 - MARNA DNA Mariner -236 350 43 282 246 136 20 chr10 74245848 74245947 -71343341 + MIR SINE MIR 43 151 -61 229 385 0 0 chr10 74246627 74246736 -71342552 + CT-rich Low_complexity Low_complexity 4 112 0 849 90 0 8 chr10 74248416 74248549 -71340739 - FLAM_C SINE Alu 0 133 2 395 161 35 63 chr10 74248728 74248871 -71340417 + C-rich Low_complexity Low_complexity 5 143 0 1618 131 32 32 chr10 74249451 74249765 -71339523 + MER44D DNA MER2_type 2 585 -24 804 96 0 0 chr10 74249777 74249892 -71339396 + (TA)n Simple_repeat Simple_repeat 1 115 0 2008 148 7 13 chr10 74250183 74250487 -71338801 + AluJo SINE Alu 1 302 -10 1420 225 47 24 chr10 74250596 74251005 -71338283 + LTR47B LTR ERVL 1 418 -25 2835 187 18 76 chr10 74251190 74251784 -71337504 + LTR8 LTR ERV1 1 545 -146 2154 109 42 0 chr10 74251784 74252068 -71337220 - AluSq SINE Alu -17 296 1 2835 187 18 76 chr10 74252068 74252207 -71337081 + LTR8 LTR ERV1 545 691 0 223 157 14 100 chr10 74252396 74252466 -71336822 - MIR3 SINE MIR -36 172 109 349 176 214 30 chr10 74252534 74252665 -71336623 + MIR3 SINE MIR 25 179 -29 2047 107 4 0 chr10 74252780 74253043 -71336245 - AluSq SINE Alu -13 300 37 393 244 104 15 chr10 74253799 74253934 -71335354 - MIR SINE MIR -16 246 100 211 287 40 30 chr10 74254073 74254174 -71335114 - MIR SINE MIR -80 128 27 668 225 18 114 chr10 74254463 74254743 -71334545 + MIR SINE MIR 7 259 -3 222 203 0 51 chr10 74254767 74254826 -71334462 + (CATG)n Simple_repeat Simple_repeat 1 56 0 222 62 0 0 chr10 74254829 74254861 -71334427 + (CA)n Simple_repeat Simple_repeat 2 33 0 204 298 12 36 chr10 74255754 74255838 -71333450 + MIR SINE MIR 45 126 -82 418 269 97 0 chr10 74256545 74256690 -71332598 - MIR3 SINE MIR -9 199 41 379 323 19 25 chr10 74257117 74257278 -71332010 + MIR SINE MIR 77 236 -26 380 234 0 32 chr10 74257328 74257422 -71331866 - MER5A DNA MER1_type -98 91 1 2264 104 7 7 chr10 74258755 74259054 -71330234 - AluSx SINE Alu -11 301 3 226 94 0 0 chr10 74259086 74259118 -71330170 + Alu SINE Alu 2 33 -100 658 290 50 25 chr10 74259130 74259413 -71329875 - LTR16A LTR ERVL 0 450 161 1826 126 77 0 chr10 74260344 74260605 -71328683 - AluSg SINE Alu -29 281 1 231 235 20 0 chr10 74260678 74260693 -71328595 + MER3 DNA MER1_type 34 49 -160 511 224 77 14 chr10 74260693 74260836 -71328452 - MER3 DNA MER1_type -1 208 57 188 222 37 0 chr10 74261177 74261231 -71328057 - MIR SINE MIR -67 141 86 1843 213 77 11 chr10 74261790 74262245 -71327043 - Charlie4a DNA MER1_type 0 508 24 630 274 0 6 chr10 74263433 74263608 -71325680 - AluSq SINE Alu -138 175 2 238 146 0 0 chr10 74263720 74263768 -71325520 - Alu SINE Alu -7 295 248 * 390 119 0 8 chr10 74263762 74263828 -71325460 + AluSp/q SINE Alu 241 299 -4 2296 113 10 0 chr10 74264114 74264423 -71324865 - AluSx SINE Alu 0 312 1 950 210 69 0 chr10 74264691 74264924 -71324364 + L1MB4 LINE L1 4628 4876 -1270 2266 143 46 62 chr10 74265399 74265779 -71323509 + L1MB4 LINE L1 4862 5247 -931 1912 154 58 21 chr10 74265779 74266104 -71323184 - MER1B DNA MER1_type 0 337 1 2266 143 46 62 chr10 74266104 74266206 -71323082 + L1MB4 LINE L1 5247 5349 -829 1928 135 9 55 chr10 74266206 74266531 -71322757 - AluJb SINE Alu -2 310 1 2266 143 46 62 chr10 74266531 74266665 -71322623 + L1MB4 LINE L1 5349 5471 -707 1599 192 13 19 chr10 74266669 74266982 -71322306 - MLT2B2 LTR ERVL -8 507 197 455 200 0 0 chr10 74267005 74267100 -71322188 - AluSg/x SINE Alu 0 309 215 * 552 84 0 24 chr10 74267092 74267170 -71322118 - AluSq SINE Alu -160 153 77 1484 151 0 0 chr10 74267170 74267382 -71321906 - AluSx SINE Alu -100 212 1 1395 108 10 0 chr10 74267386 74267590 -71321698 - MLT2B2 LTR ERVL -309 206 1 3563 159 4 40 chr10 74267608 74267933 -71321355 + L1MB4 LINE L1 5476 5811 -369 1935 155 24 0 chr10 74267933 74268229 -71321059 - AluJb SINE Alu -9 303 1 3563 159 4 40 chr10 74268229 74268578 -71320710 + L1MB4 LINE L1 5811 6125 -55 2353 76 17 0 chr10 74268578 74268866 -71320422 + AluSp SINE Alu 1 293 -20 3563 159 4 40 chr10 74268866 74268921 -71320367 + L1MB4 LINE L1 6125 6180 0 1752 152 10 24 chr10 74269178 74269475 -71319813 - AluJb SINE Alu -19 293 1 246 274 274 5 chr10 74269493 74269683 -71319605 - L1ME LINE L1 -281 5889 5649 2251 118 3 0 chr10 74269888 74270184 -71319104 + AluSg SINE Alu 1 297 -13 309 216 148 11 chr10 74270603 74270691 -71318597 - L2 LINE L2 -5 3267 3168 240 330 33 0 chr10 74271957 74272048 -71317240 - MIR SINE MIR -48 214 121 524 284 66 25 chr10 74272281 74272478 -71316810 + MIR SINE MIR 51 255 -7 181 184 0 0 chr10 74272585 74272623 -71316665 - L2 LINE L2 0 3313 3276 183 225 0 70 chr10 74273038 74273109 -71316179 + MIR SINE MIR 90 155 -107 1191 280 89 21 chr10 74273316 74273830 -71315458 - L2 LINE L2 -1116 2198 1650 3105 228 91 3 chr10 74273830 74274678 -71314610 + L1ME1 LINE L1 3199 4120 -2026 1692 188 15 51 chr10 74274695 74275105 -71314183 + L1ME1 LINE L1 4819 5213 -933 672 164 17 0 chr10 74275105 74275221 -71314067 + FLAM_C SINE Alu 3 120 -23 3591 212 55 24 chr10 74275231 74276174 -71313114 + L1ME1 LINE L1 5189 6161 -5 22 35 0 0 chr10 74276244 74276273 -71313015 + AT_rich Low_complexity Low_complexity 1 29 0 2284 72 16 6 chr10 74276515 74276833 -71312455 - L1PA7 LINE L1 -3 6151 5831 16674 75 9 7 chr10 74276833 74279248 -71310040 + L1P LINE L1 2948 5369 -777 699 216 125 0 chr10 74279756 74279932 -71309356 + MIR SINE MIR 1 198 -64 2566 78 3 0 chr10 74280138 74280447 -71308841 - AluSg SINE Alu 0 310 1 198 0 0 0 chr10 74280935 74280957 -71308331 + (A)n Simple_repeat Simple_repeat 1 22 0 474 236 9 0 chr10 74282048 74282158 -71307130 + MIR SINE MIR 58 168 -94 214 306 65 28 chr10 74282541 74282649 -71306639 + MIR3 SINE MIR 58 169 -39 256 267 36 109 chr10 74282735 74282900 -71306388 + MER20B DNA MER1_type 136 288 -495 645 194 14 29 chr10 74282902 74283041 -71306247 + FLAM_A SINE Alu 1 137 -5 1525 251 59 11 chr10 74283044 74283515 -71305773 + MER20B DNA MER1_type 290 783 0 427 145 26 0 chr10 74283564 74283640 -71305648 - MER5A DNA MER1_type -111 78 1 407 238 188 12 chr10 74284182 74284342 -71304946 - MIR SINE MIR -61 201 14 383 267 15 122 chr10 74284999 74285261 -71304027 + MIR SINE MIR 23 256 -6 693 266 34 6 chr10 74285586 74285763 -71303525 - L2 LINE L2 0 3313 3132 1962 150 0 45 chr10 74286553 74286906 -71302382 - MER1B DNA MER1_type 0 337 1 1102 283 42 5 chr10 74287273 74287655 -71301633 + L2 LINE L2 2170 2565 -749 180 0 0 0 chr10 74287655 74287675 -71301613 + (CCA)n Simple_repeat Simple_repeat 2 21 0 1221 227 124 38 chr10 74287761 74288188 -71301100 + MLT2B1 LTR ERVL 1 464 -56 580 231 82 77 chr10 74288261 74288469 -71300819 + LTR16A LTR ERVL 177 385 -65 914 243 205 8 chr10 74288489 74289051 -71300237 + L2 LINE L2 2606 3300 -13 225 0 0 0 chr10 74289051 74289076 -71300212 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 831 228 94 5 chr10 74289764 74289988 -71299300 + MIR SINE MIR 9 252 -10 373 218 55 18 chr10 74290460 74290570 -71298718 + L3 LINE CR1 1378 1491 -86 353 315 167 34 chr10 74290892 74291292 -71297996 - L2 LINE L2 -24 3248 2791 470 318 56 9 chr10 74291454 74291668 -71297620 + MIR SINE MIR 34 257 -5 453 256 34 32 chr10 74292054 74292212 -71297076 - MIR SINE MIR -25 237 82 459 0 0 0 chr10 74292237 74292288 -71297000 + (TTA)n Simple_repeat Simple_repeat 2 52 0 190 273 216 0 chr10 74292417 74292505 -71296783 + L3 LINE CR1 1360 1466 -111 248 348 28 28 chr10 74293254 74293395 -71295893 - MIR3 SINE MIR -51 157 17 308 294 103 22 chr10 74293465 74293601 -71295687 - MIR3 SINE MIR -54 154 8 294 233 70 0 chr10 74293955 74294041 -71295247 + MIR3 SINE MIR 101 192 -16 447 287 22 7 chr10 74294122 74294258 -71295030 + MIR SINE MIR 104 241 -21 208 323 32 0 chr10 74294449 74294542 -71294746 - MIR SINE MIR -84 124 29 1117 84 0 0 chr10 74294694 74294837 -71294451 + AluSq/x SINE Alu 1 143 -169 2338 76 0 0 chr10 74294837 74295138 -71294150 + AluY SINE Alu 1 301 -10 1708 166 14 3 chr10 74296946 74297241 -71292047 + AluJo SINE Alu 1 298 -14 1215 164 72 117 chr10 74297681 74297861 -71291427 - MER2 DNA MER2_type 0 344 185 1912 133 0 14 chr10 74297861 74298170 -71291118 - AluSx SINE Alu 0 305 1 1215 164 72 117 chr10 74298170 74298347 -71290941 - MER2 DNA MER2_type -159 185 2 4207 56 24 65 chr10 74299026 74300099 -71289189 + MER11A LTR ERVK 1 1266 0 375 301 148 28 chr10 74300391 74300607 -71288681 - L1ME4a LINE L1 0 6121 5880 201 302 93 0 chr10 74300735 74300821 -71288467 + MER5A DNA MER1_type 21 114 -75 201 318 15 0 chr10 74301281 74301347 -71287941 + MIR SINE MIR 77 143 -119 1022 157 10 41 chr10 74301989 74302186 -71287102 + AluJo SINE Alu 120 310 -2 236 132 0 0 chr10 74302526 74302564 -71286724 - MIR SINE MIR -150 112 75 732 345 59 13 chr10 74302651 74303127 -71286161 + L2 LINE L2 2435 2932 -382 342 291 121 21 chr10 74303240 74303381 -71285907 + L2 LINE L2 3159 3313 0 297 246 63 19 chr10 74304116 74304254 -71285034 + MLT1K LTR MaLR 71 284 -304 2533 121 15 30 chr10 74305046 74305321 -71283967 + MLT1B LTR MaLR 1 270 -120 2393 66 0 0 chr10 74305321 74305643 -71283645 + AluY SINE Alu 1 311 0 2533 121 15 30 chr10 74305643 74305763 -71283525 + MLT1B LTR MaLR 270 390 0 355 289 39 8 chr10 74305802 74305930 -71283358 + MIR3 SINE MIR 10 141 -67 882 266 57 59 chr10 74306249 74306674 -71282614 + L2 LINE L2 2888 3311 -2 2225 114 0 0 chr10 74307611 74307919 -71281369 + AluSx SINE Alu 1 308 -4 1061 140 10 45 chr10 74308625 74308825 -71280463 - AluJo SINE Alu -3 309 117 674 308 48 25 chr10 74308854 74309211 -71280077 - L1M4 LINE L1 -1251 4895 4531 31 31 0 47 chr10 74309226 74309290 -71279998 + AT_rich Low_complexity Low_complexity 1 61 0 411 175 25 0 chr10 74311508 74311588 -71277700 + MIR SINE MIR 48 129 -79 542 192 19 0 chr10 74311950 74312054 -71277234 + FRAM SINE Alu 59 164 -12 191 176 0 103 chr10 74312423 74312491 -71276797 + L2 LINE L2 3196 3256 -16 550 269 102 69 chr10 74312641 74312946 -71276342 - L2 LINE L2 0 3272 2958 637 182 63 6 chr10 74313156 74313315 -71275973 - Charlie1b DNA MER1_type 0 523 356 1399 199 11 4 chr10 74313320 74313586 -71275702 + AluJb SINE Alu 1 268 -44 223 169 0 34 chr10 74313591 74313650 -71275638 + G-rich Low_complexity Low_complexity 5 61 0 186 43 0 0 chr10 74313654 74313677 -71275611 + (GAAA)n Simple_repeat Simple_repeat 4 26 0 860 250 128 19 chr10 74313682 74313994 -71275294 - Charlie1b DNA MER1_type -176 347 2 721 250 185 14 chr10 74314020 74314470 -71274818 - L2 LINE L2 -71 3242 2660 663 121 105 57 chr10 74314470 74314594 -71274694 - FLAM_A SINE Alu -3 130 1 721 250 185 14 chr10 74314594 74314763 -71274525 - L2 LINE L2 -653 2660 2521 382 276 123 35 chr10 74314986 74315189 -71274099 + L1MC4 LINE L1 7454 7674 -368 572 272 47 6 chr10 74315199 74315368 -71273920 - MER21B LTR ERV1 -47 816 641 1129 139 0 246 chr10 74315369 74315751 -71273537 + AluJb SINE Alu 1 288 -24 1104 238 158 69 chr10 74315752 74316125 -71273163 - MER21B LTR ERV1 -212 651 204 189 74 0 0 chr10 74316125 74316152 -71273136 + (CCCCCA)n Simple_repeat Simple_repeat 4 30 0 1104 238 158 69 chr10 74316152 74316371 -71272917 - MER21B LTR ERV1 -659 204 6 342 0 0 0 chr10 74317536 74317574 -71271714 + (TG)n Simple_repeat Simple_repeat 2 39 0 189 0 0 0 chr10 74317573 74317594 -71271694 + (TTTTG)n Simple_repeat Simple_repeat 3 23 0 * 1056 128 0 0 chr10 74317598 74317747 -71271541 - FRAM SINE Alu -30 146 1 183 341 44 22 chr10 74318261 74318352 -71270936 + MIR SINE MIR 64 156 -106 292 294 32 24 chr10 74318540 74318666 -71270622 + MER113 DNA MER1_type? 1 127 -394 423 248 28 28 chr10 74318836 74318977 -71270311 - MIR3 SINE MIR -48 160 20 371 297 74 6 chr10 74319524 74319699 -71269589 + MIR SINE MIR 70 256 -6 211 319 14 0 chr10 74320439 74320508 -71268780 + MIR3 SINE MIR 115 184 -24 204 345 47 47 chr10 74320579 74320727 -71268561 - L3b LINE CR1 -141 1442 1295 1147 255 123 19 chr10 74320948 74321371 -71267917 - MLT1D LTR MaLR -8 497 31 2330 81 3 0 chr10 74321385 74321682 -71267606 - AluSx SINE Alu -14 298 1 260 192 39 0 chr10 74322515 74322567 -71266721 + MER5B DNA MER1_type 3 56 -122 2389 73 0 13 chr10 74322575 74322890 -71266398 + AluY SINE Alu 1 311 0 1499 157 20 68 chr10 74322909 74323203 -71266085 + AluJb SINE Alu 1 280 -32 244 241 17 0 chr10 74323222 74323280 -71266008 + MER5A DNA MER1_type 63 121 -68 279 247 135 0 chr10 74323980 74324069 -71265219 + MIR SINE MIR 96 196 -66 279 320 72 20 chr10 74324109 74324262 -71265026 - MIR SINE MIR -8 254 94 486 0 0 0 chr10 74325140 74325194 -71264094 + (CATCT)n Simple_repeat Simple_repeat 3 56 0 201 196 36 36 chr10 74325395 74325451 -71263837 - MIR SINE MIR -71 137 82 745 267 144 50 chr10 74325489 74325964 -71263324 + L2 LINE L2 2795 3312 -1 197 125 0 21 chr10 74326071 74326119 -71263169 + (TTTTG)n Simple_repeat Simple_repeat 2 48 0 326 209 77 0 chr10 74326416 74326507 -71262781 + MIR3 SINE MIR 107 204 -4 388 306 31 19 chr10 74326760 74326920 -71262368 + HAL1b LINE L1 1187 1348 0 501 294 44 6 chr10 74327125 74327285 -71262003 + MIR3 SINE MIR 36 201 -7 599 261 226 0 chr10 74327339 74327538 -71261750 - MIR SINE MIR -14 248 5 304 290 58 29 chr10 74327932 74328070 -71261218 - L2 LINE L2 -6 3266 3125 1205 205 17 27 chr10 74328420 74328713 -71260575 - MER113 DNA MER1_type? -109 412 123 262 128 0 0 chr10 74328715 74328754 -71260534 + LTR56 LTR ERV1 349 387 -58 1980 142 3 0 chr10 74328824 74329119 -71260169 + AluSx SINE Alu 1 296 -16 21 57 0 0 chr10 74329124 74329159 -71260129 + AT_rich Low_complexity Low_complexity 1 35 0 669 232 54 58 chr10 74329218 74329442 -71259846 + L1ME3A LINE L1 5933 6155 -15 297 278 65 0 chr10 74329433 74329541 -71259747 + L1MC4a LINE L1 5598 5712 -2096 * 685 104 35 28 chr10 74329547 74329691 -71259597 + GA-rich Low_complexity Low_complexity 1 145 0 385 284 47 16 chr10 74329697 74329887 -71259401 + L1MC4a LINE L1 5723 5918 -1890 1782 116 48 0 chr10 74330037 74330305 -71258983 - AluSc SINE Alu -5 304 24 1760 174 27 0 chr10 74330378 74330676 -71258612 - AluSx SINE Alu -6 306 1 1999 127 3 0 chr10 74330684 74330975 -71258313 - AluSx SINE Alu -20 292 1 242 354 18 50 chr10 74331567 74331731 -71257557 - MIR SINE MIR -64 144 28 197 237 0 0 chr10 74331841 74331879 -71257409 + MER5B DNA MER1_type 1 38 -140 182 286 36 12 chr10 74332012 74332096 -71257192 - L3 LINE CR1 -222 1355 1270 274 256 122 0 chr10 74332167 74332249 -71257039 - MIR SINE MIR -84 124 33 442 305 116 0 chr10 74332600 74332764 -71256524 - MIR SINE MIR 0 262 80 274 170 57 0 chr10 74332766 74332819 -71256469 + U6 snRNA snRNA 1 56 -51 31 0 0 0 chr10 74332822 74332853 -71256435 + AT_rich Low_complexity Low_complexity 1 31 0 235 283 83 50 chr10 74333028 74333148 -71256140 - MIR SINE MIR -71 137 13 1737 127 23 17 chr10 74334345 74334645 -71254643 + AluJb SINE Alu 1 302 -10 2184 99 0 13 chr10 74334645 74334959 -71254329 + AluSx SINE Alu 1 310 -2 1812 169 0 13 chr10 74335502 74335815 -71253473 + AluJo SINE Alu 1 309 -3 2178 108 0 0 chr10 74335912 74336208 -71253080 + AluSx SINE Alu 1 296 -16 437 283 36 22 chr10 74336896 74337034 -71252254 + MER5B DNA MER1_type 11 150 -28 1860 146 10 0 chr10 74337037 74337339 -71251949 - AluSx SINE Alu -5 307 3 200 209 0 23 chr10 74337343 74337386 -71251902 - MER5B DNA MER1_type -136 42 1 401 224 211 16 chr10 74337469 74337640 -71251648 + MER63A DNA MER1_type 1 168 -42 260 214 179 0 chr10 74338279 74338363 -71250925 + MIR3 SINE MIR 110 208 0 259 333 12 0 chr10 74338381 74338465 -71250823 - L2 LINE L2 -10 3303 3219 1683 151 17 23 chr10 74338565 74338864 -71250424 + AluJo SINE Alu 12 308 -4 1640 256 74 91 chr10 74338906 74340098 -71249190 - L2 LINE L2 -337 2977 1771 2471 59 0 30 chr10 74340176 74340480 -71248808 - AluY SINE Alu -16 295 1 868 256 214 15 chr10 74340484 74340941 -71248347 + MLT1H1 LTR MaLR 3 550 -5 2122 125 10 0 chr10 74340954 74341249 -71248039 - AluSg SINE Alu -11 299 2 21 0 0 0 chr10 74341260 74341281 -71248007 + AT_rich Low_complexity Low_complexity 1 21 0 852 159 0 8 chr10 74341463 74341595 -71247693 + FLAM_C SINE Alu 3 133 0 391 165 0 31 chr10 74341601 74341698 -71247590 + GA-rich Low_complexity Low_complexity 5 98 0 224 256 141 16 chr10 74341783 74341889 -71247399 - MIR SINE MIR -37 225 97 2280 98 27 0 chr10 74341912 74342207 -71247081 + AluY SINE Alu 1 303 -8 296 242 10 40 chr10 74342474 74342573 -71246715 + MER103 DNA DNA 61 156 -10 2194 118 13 7 chr10 74344017 74344322 -71244966 + AluSx SINE Alu 1 307 -5 384 22 0 0 chr10 74344409 74344454 -71244834 + (TG)n Simple_repeat Simple_repeat 1 45 0 262 330 36 9 chr10 74344818 74344930 -71244358 - MIR3 SINE MIR -22 186 72 1978 128 0 60 chr10 74345205 74345524 -71243764 - AluSx SINE Alu -10 302 3 188 325 44 44 chr10 74346116 74346230 -71243058 + L2 LINE L2 3142 3255 -17 2071 120 0 11 chr10 74348478 74348761 -71240527 + AluSg SINE Alu 1 280 -30 7559 158 144 17 chr10 74348765 74350268 -71239020 + MER52A LTR ERV1 62 1755 0 2269 128 120 5 chr10 74350389 74350772 -71238516 + MSTA LTR MaLR 2 428 0 2228 204 22 81 chr10 74350773 74351487 -71237801 + L1MA9 LINE L1 5611 6282 -30 995 104 0 8 chr10 74351503 74351620 -71237668 + FLAM_C SINE Alu 1 118 -184 369 0 0 0 chr10 74351620 74351661 -71237627 + (CA)n Simple_repeat Simple_repeat 2 42 0 995 104 0 8 chr10 74351661 74351677 -71237611 + FLAM_C SINE Alu 118 133 -169 1988 142 3 40 chr10 74352356 74352680 -71236608 + AluSx SINE Alu 1 312 0 241 286 58 45 chr10 74353011 74353235 -71236053 + L1M4 LINE L1 2131 2357 -3789 2003 144 23 0 chr10 74353246 74353551 -71235737 + AluJb SINE Alu 1 312 0 1049 153 6 0 chr10 74353617 74353774 -71235514 + AluJo SINE Alu 9 166 -146 611 155 0 0 chr10 74353775 74353878 -71235410 + AluSg/x SINE Alu 209 311 -1 684 312 58 50 chr10 74353889 74354120 -71235168 + L1M4 LINE L1 2426 2654 -3492 1829 136 0 60 chr10 74354120 74354421 -71234867 + AluSx SINE Alu 1 283 -29 189 0 0 0 chr10 74354425 74354446 -71234842 + (TAA)n Simple_repeat Simple_repeat 2 22 0 684 312 58 50 chr10 74354446 74354606 -71234682 + L1M4 LINE L1 2656 2825 -3321 1785 160 7 33 chr10 74354606 74354741 -71234547 + AluJo SINE Alu 1 138 -174 2529 70 0 10 chr10 74354741 74355055 -71234233 + AluY SINE Alu 1 311 0 1785 160 7 33 chr10 74355055 74355219 -71234069 + AluJo SINE Alu 138 292 -20 520 246 53 39 chr10 74355236 74355443 -71233845 + HAL1 LINE L1 2298 2507 0 2414 93 10 6 chr10 74355484 74355796 -71233492 - AluSq SINE Alu 0 313 1 2048 149 0 0 chr10 74355796 74356098 -71233190 - AluSx SINE Alu -10 302 1 310 286 95 32 chr10 74356125 74356251 -71233037 + MIR SINE MIR 11 144 -118 828 185 11 69 chr10 74356977 74357042 -71232246 - MER5B DNA MER1_type 0 178 111 2437 80 7 0 chr10 74357042 74357344 -71231944 + AluSp SINE Alu 1 304 -9 828 185 11 69 chr10 74357344 74357467 -71231821 - MER5B DNA MER1_type -67 111 1 318 132 0 0 chr10 74357798 74357851 -71231437 + (CAT)n Simple_repeat Simple_repeat 1 53 0 2559 78 0 0 chr10 74357926 74358235 -71231053 - AluY SINE Alu -2 309 1 269 277 59 50 chr10 74358495 74358614 -71230674 + MIR3 SINE MIR 15 134 -74 222 313 83 14 chr10 74358891 74358990 -71230298 + MIR SINE MIR 15 117 -102 731 188 135 0 chr10 74359011 74359181 -71230107 - MIR SINE MIR -1 261 69 275 291 13 0 chr10 74359476 74359555 -71229733 + LTR67 LTR ERVL 97 176 -381 * 579 253 60 60 chr10 74359489 74359738 -71229550 + MLT1L LTR MaLR 168 416 -199 1956 110 25 73 chr10 74360261 74360588 -71228700 - AluSp SINE Alu -2 311 1 619 235 132 35 chr10 74360633 74360759 -71228529 - MLT1J LTR MaLR -173 338 226 351 0 0 0 chr10 74360759 74360798 -71228490 + (TG)n Simple_repeat Simple_repeat 2 40 0 619 235 132 35 chr10 74360798 74360960 -71228328 - MLT1J LTR MaLR -285 226 22 380 274 69 44 chr10 74360991 74361195 -71228093 - L2 LINE L2 -537 2777 2569 764 134 14 42 chr10 74361567 74361709 -71227579 + FLAM_C SINE Alu 6 143 0 210 207 69 58 chr10 74361732 74361819 -71227469 - L2 LINE L2 -228 3044 2957 302 287 113 33 chr10 74363688 74363838 -71225450 - L2 LINE L2 0 3313 3152 2305 95 3 3 chr10 74364154 74364449 -71224839 - AluSx SINE Alu -17 295 1 2340 189 12 22 chr10 74364449 74364780 -71224508 - L1M4 LINE L1 -981 5165 4839 2201 98 0 60 chr10 74364780 74365096 -71224192 - AluSx SINE Alu -15 297 1 2340 189 12 22 chr10 74365096 74365273 -71224015 - L1M4 LINE L1 -1307 4839 4662 234 346 0 13 chr10 74365373 74365451 -71223837 + L2 LINE L2 3236 3312 -1 360 224 0 0 chr10 74365580 74365678 -71223610 + G-rich Low_complexity Low_complexity 1 98 0 1067 110 0 21 chr10 74365705 74365850 -71223438 + AluY SINE Alu 106 247 -64 269 185 161 25 chr10 74365850 74365931 -71223357 - MLT1J LTR MaLR -400 111 20 600 73 0 92 chr10 74366737 74366846 -71222442 + THE1-int LTR MaLR 1173 1271 -309 * 679 43 96 43 chr10 74366843 74366958 -71222330 - THE1C-int LTR MaLR -172 1408 1288 6036 110 97 10 chr10 74366984 74367957 -71221331 - THE1C-int LTR MaLR -523 1057 1 2639 114 3 36 chr10 74367957 74368344 -71220944 - THE1C LTR MaLR 0 375 2 464 287 42 14 chr10 74368347 74368490 -71220798 + MIR SINE MIR 2 148 -114 184 368 23 60 chr10 74368513 74368646 -71220642 - L3 LINE CR1 -1019 558 431 450 0 0 0 chr10 74369285 74369333 -71219955 + (TG)n Simple_repeat Simple_repeat 1 98 0 450 0 0 0 chr10 74369333 74369383 -71219905 + (TG)n Simple_repeat Simple_repeat 2 51 0 2367 96 0 10 chr10 74371155 74371468 -71217820 + AluSg SINE Alu 1 310 0 215 267 171 94 chr10 74371824 74372281 -71217007 + L2 LINE L2 2175 2666 -648 951 102 55 0 chr10 74372339 74372466 -71216822 + AluSx SINE Alu 1 134 -179 37 23 0 0 chr10 74372466 74372510 -71216778 + AT_rich Low_complexity Low_complexity 1 44 0 1303 131 0 0 chr10 74372514 74372690 -71216598 + AluSx SINE Alu 118 293 -19 247 270 52 87 chr10 74372801 74372916 -71216372 - L2 LINE L2 0 3272 3162 285 225 22 45 chr10 74372992 74373081 -71216207 - Charlie7 DNA MER1_type -2520 92 6 817 303 83 47 chr10 74373115 74373667 -71215621 - MLT1K LTR MaLR -12 576 5 4415 266 93 36 chr10 74373857 74374635 -71214653 + L1MEc LINE L1 35 768 -5628 2023 128 106 69 chr10 74374635 74375071 -71214217 + LTR47A LTR ERVL 1 452 0 4415 266 93 36 chr10 74375071 74376276 -71213012 + L1MEc LINE L1 768 2130 -4266 365 271 22 122 chr10 74377027 74377208 -71212080 + MIR3 SINE MIR 26 188 -20 498 281 127 35 chr10 74377251 74377511 -71211777 + MER102a DNA MER1_type 32 315 -15 482 260 65 26 chr10 74378129 74378283 -71211005 + MIR SINE MIR 25 184 -78 411 333 8 0 chr10 74378548 74378677 -71210611 - MIR SINE MIR -68 194 65 181 348 14 0 chr10 74378836 74378905 -71210383 + L2 LINE L2 2987 3056 -216 654 268 107 33 chr10 74379176 74379272 -71210016 + L1ME4a LINE L1 5576 5663 -458 2106 132 0 7 chr10 74379272 74379568 -71209720 + AluSx SINE Alu 1 294 -18 654 268 107 33 chr10 74379568 74379795 -71209493 + L1ME4a LINE L1 5663 5945 -176 315 49 0 0 chr10 74379795 74379836 -71209452 + (TC)n Simple_repeat Simple_repeat 2 42 0 654 268 107 33 chr10 74379836 74379970 -71209318 + L1ME4a LINE L1 5945 6068 -53 900 94 0 0 chr10 74380676 74380804 -71208484 + (TA)n Simple_repeat Simple_repeat 2 129 0 184 219 164 27 chr10 74380817 74380890 -71208398 - MIR SINE MIR -165 97 15 1055 241 160 24 chr10 74381628 74382072 -71207216 - MLT1C LTR MaLR 0 488 1 1540 103 15 5 chr10 74382567 74382771 -71206517 + AluSq SINE Alu 1 206 -107 436 35 0 0 chr10 74382772 74382829 -71206459 + AluSq SINE Alu 241 297 -12 357 255 0 0 chr10 74383038 74383132 -71206156 - L1MEd LINE L1 -6008 111 18 363 297 132 10 chr10 74383146 74383449 -71205839 - L1ME4a LINE L1 -234 5887 5548 398 319 94 59 chr10 74383699 74383892 -71205396 + L2 LINE L2 2438 2650 -664 1979 164 7 13 chr10 74383892 74384197 -71205091 - AluJb SINE Alu -9 303 1 398 319 94 59 chr10 74384197 74384342 -71204946 + L2 LINE L2 2650 2788 -526 370 311 68 0 chr10 74384383 74384515 -71204773 + MIR SINE MIR 48 188 -74 340 267 36 65 chr10 74384571 74384788 -71204500 - MLT1I LTR MaLR -118 332 123 430 273 47 27 chr10 74385728 74385878 -71203410 - MIR3 SINE MIR -27 181 29 1531 135 0 46 chr10 74386304 74386563 -71202725 - AluJo SINE Alu -37 275 29 460 254 43 29 chr10 74387448 74387586 -71201702 - MIR3 SINE MIR -61 147 8 189 0 0 0 chr10 74387736 74387757 -71201531 + (CTG)n Simple_repeat Simple_repeat 2 22 0 607 113 28 0 chr10 74387757 74387863 -71201425 + CT-rich Low_complexity Low_complexity 3 111 0 1622 200 32 0 chr10 74388128 74388413 -71200875 - AluSx SINE Alu -18 294 1 409 253 75 65 chr10 74388496 74388682 -71200606 - MIR SINE MIR -74 188 1 227 262 28 84 chr10 74389404 74389511 -71199777 + MIR3 SINE MIR 15 115 -93 201 241 139 0 chr10 74389956 74390031 -71199257 - MIR SINE MIR -101 161 73 851 160 0 21 chr10 74393921 74394065 -71195223 - AluJo SINE Alu -171 141 1 372 237 39 96 chr10 74394465 74394621 -71194667 + MIR SINE MIR 46 192 -70 1584 214 54 27 chr10 74394820 74395193 -71194095 - MLT1E LTR MaLR 0 593 211 301 226 16 0 chr10 74395220 74395282 -71194006 - MLT1E LTR MaLR -479 63 1 253 139 0 0 chr10 74395310 74395346 -71193942 + U2 snRNA snRNA 1 36 -152 462 65 0 0 chr10 74395399 74395461 -71193827 + (CA)n Simple_repeat Simple_repeat 2 63 0 378 0 0 0 chr10 74396073 74396115 -71193173 + (CA)n Simple_repeat Simple_repeat 1 42 0 252 253 120 0 chr10 74396367 74396442 -71192846 - MIR SINE MIR -131 131 48 608 229 42 52 chr10 74396456 74396648 -71192640 - L1MC5 LINE L1 -44 7917 7728 645 269 91 33 chr10 74396683 74396925 -71192363 + MIR SINE MIR 5 260 -2 485 301 118 0 chr10 74397738 74397967 -71191321 - MIR SINE MIR 0 262 7 518 304 26 53 chr10 74398002 74398344 -71190944 - L1MC5 LINE L1 -26 7935 7603 457 138 202 0 chr10 74398514 74398608 -71190680 - MER81 DNA DNA 0 114 2 482 293 24 6 chr10 74399337 74399504 -71189784 - MIR3 SINE MIR -26 182 13 470 337 72 0 chr10 74400469 74400635 -71188653 + MIR SINE MIR 3 180 -82 482 292 227 31 chr10 74500713 74501097 -71088191 - L3 LINE CR1 -215 1362 904 22 70 0 0 chr10 74501347 74501390 -71087898 + AT_rich Low_complexity Low_complexity 1 43 0 2100 116 38 0 chr10 74502230 74502522 -71086766 + AluSg SINE Alu 1 303 -7 286 301 58 102 chr10 74503877 74504083 -71085205 - L2 LINE L2 -91 3181 2985 364 252 243 43 chr10 74504103 74504313 -71084975 + L2 LINE L2 3020 3271 -1 426 39 0 0 chr10 74505025 74505077 -71084211 + (CA)n Simple_repeat Simple_repeat 1 52 0 269 365 61 7 chr10 74505181 74505329 -71083959 + MIR SINE MIR 56 211 -51 277 239 43 35 chr10 74505936 74506038 -71083250 - MIR SINE MIR -76 132 33 217 316 82 20 chr10 74506587 74506685 -71082603 - MER91A DNA MER1_type -27 169 66 864 192 0 9 chr10 74506930 74507362 -71081926 + (TGG)n Simple_repeat Simple_repeat 1 427 0 524 200 112 0 chr10 74507595 74507720 -71081568 - MLT1H1 LTR MaLR -5 550 412 444 214 120 0 chr10 74507803 74507920 -71081368 - MLT1H1 LTR MaLR -5 550 420 256 132 0 0 chr10 74508017 74508055 -71081233 - MLT1I LTR MaLR -274 135 98 225 140 20 20 chr10 74508029 74508079 -71081209 - MLT1H LTR MaLR -394 155 106 * 438 339 49 11 chr10 74508465 74508648 -71080640 + MIR SINE MIR 49 238 -24 226 209 0 0 chr10 74509013 74509056 -71080232 - L2 LINE L2 -214 3058 3016 260 130 14 58 chr10 74509385 74509454 -71079834 - MER53 DNA DNA -123 66 1 742 310 134 7 chr10 74511245 74511664 -71077624 + MLT1K LTR MaLR 7 478 -110 2072 129 30 7 chr10 74512241 74512544 -71076744 - AluSg SINE Alu 0 310 1 446 190 161 44 chr10 74512738 74512875 -71076413 + MLT1J LTR MaLR 336 488 -23 332 257 204 0 chr10 74512902 74513015 -71076273 + L2 LINE L2 3137 3272 0 441 212 24 0 chr10 74513185 74513270 -71076018 - L2 LINE L2 0 3272 3186 346 287 49 30 chr10 74513359 74513523 -71075765 - L2 LINE L2 -255 3017 2851 491 299 23 17 chr10 74514521 74514695 -71074593 - MER117 DNA MER1_type -12 185 11 475 210 41 142 chr10 74515074 74515293 -71073995 - MER117 DNA MER1_type 0 197 1 374 160 53 0 chr10 74515829 74515904 -71073384 + MIR SINE MIR 113 191 -71 1102 226 4 36 chr10 74516031 74516283 -71073005 - MIR SINE MIR -16 246 3 237 250 129 57 chr10 74516856 74516980 -71072308 + MER5B DNA MER1_type 17 149 -29 356 291 119 104 chr10 74517528 74517882 -71071406 + L2 LINE L2 2914 3272 0 599 304 42 29 chr10 74517923 74518163 -71071125 + L3 LINE CR1 1333 1575 -2 376 251 118 80 chr10 74518666 74518818 -71070470 - Charlie8 DNA MER1_type -59 282 120 2361 107 0 0 chr10 74518818 74519128 -71070160 - AluSx SINE Alu -2 310 1 376 251 118 80 chr10 74519128 74519162 -71070126 - Charlie8 DNA MER1_type -221 120 89 498 281 135 10 chr10 74519386 74519699 -71069589 + LTR16A LTR ERVL 21 362 -88 2433 192 89 15 chr10 74520328 74520869 -71068419 - MER119 DNA MER1_type -2 581 1 1104 97 0 7 chr10 74521100 74521244 -71068044 + AluSq/x SINE Alu 1 143 -170 928 199 34 27 chr10 74521419 74521681 -71067607 - L1M4 LINE L1 -1298 4848 4585 602 79 10 40 chr10 74521681 74521782 -71067506 + MER4A LTR ERV1 1 98 -566 1845 115 9 22 chr10 74521783 74522132 -71067156 + MER4A LTR ERV1 262 664 0 1295 258 129 2 chr10 74522133 74522582 -71066706 - L1M4 LINE L1 -1559 4587 4082 686 309 81 55 chr10 74522672 74523131 -71066157 - L1MEc LINE L1 -5865 531 61 1705 128 14 78 chr10 74523199 74523567 -71065721 - MER4A LTR ERV1 0 664 262 491 133 89 0 chr10 74523568 74523658 -71065630 - MER4A LTR ERV1 -566 98 1 354 259 237 7 chr10 74523669 74523808 -71065480 - L1MEd LINE L1 -5270 849 679 2370 196 115 75 chr10 74524004 74524793 -71064495 + LTR1B LTR ERV1 1 821 -5 189 121 0 0 chr10 74525408 74525441 -71063847 + (TTCA)n Simple_repeat Simple_repeat 4 36 0 2206 120 30 0 chr10 74526026 74526325 -71062963 + AluSx SINE Alu 1 308 -4 422 229 118 35 chr10 74526327 74526497 -71062791 - MIR SINE MIR -64 198 15 431 323 25 22 chr10 74526497 74526819 -71062469 + L1M4 LINE L1 4860 5182 -964 4208 189 31 29 chr10 74526821 74528084 -71061204 + L1MB8 LINE L1 4923 6163 -15 687 83 51 13 chr10 74529115 74529272 -71060016 + (TCTA)n Simple_repeat Simple_repeat 1 163 0 364 285 128 28 chr10 74530002 74530181 -71059107 - MIR SINE MIR -57 205 9 448 254 110 0 chr10 74531265 74531383 -71057905 + MIR SINE MIR 47 177 -85 759 189 91 0 chr10 74531451 74531626 -71057662 + MER46C DNA MER2_type 6 196 -142 528 302 63 27 chr10 74531883 74531990 -71057298 - MIR SINE MIR -2 260 158 1918 125 54 7 chr10 74531990 74532269 -71057019 - AluSx SINE Alu -20 292 1 528 302 63 27 chr10 74532269 74532383 -71056905 - MIR SINE MIR -104 158 31 324 302 25 19 chr10 74533143 74533302 -71055986 - L1MC4a LINE L1 -1905 5903 5744 255 319 42 0 chr10 74533406 74533525 -71055763 - L1MC4a LINE L1 -477 5644 5521 404 286 70 79 chr10 74533717 74533958 -71055330 + MIR SINE MIR 1 239 -23 236 260 0 0 chr10 74533977 74534050 -71055238 + (TTA)n Simple_repeat Simple_repeat 1 73 0 344 228 24 102 chr10 74534569 74534736 -71054552 + MIR3 SINE MIR 44 197 -11 282 276 5 25 chr10 74534851 74534965 -71054323 - MIR SINE MIR -56 206 97 483 260 78 13 chr10 74535122 74535276 -71054012 - MIR SINE MIR -37 225 62 2118 116 0 11 chr10 74535663 74535986 -71053302 + AluSx SINE Alu 1 320 0 767 221 24 29 chr10 74536073 74536281 -71053007 - LTR16C LTR ERVL 0 491 285 816 241 42 0 chr10 74537031 74537222 -71052066 + MIR SINE MIR 60 258 -4 533 235 8 15 chr10 74537824 74537956 -71051332 + MIR3 SINE MIR 30 160 -48 252 254 103 52 chr10 74537963 74538125 -71051163 - MER5A DNA MER1_type -10 179 1 722 239 144 6 chr10 74539431 74539611 -71049677 - MIR SINE MIR 0 262 58 200 308 0 0 chr10 74539667 74539732 -71049556 - MIR SINE MIR -12 250 186 1425 192 70 3 chr10 74539858 74540170 -71049118 - MER58B DNA MER1_type -8 333 1 2187 105 3 51 chr10 74540442 74540757 -71048531 + AluSx SINE Alu 1 300 -12 1182 266 81 44 chr10 74540760 74541301 -71047987 - MLT1K LTR MaLR -24 564 4 214 250 88 0 chr10 74541309 74541377 -71047911 + MIR SINE MIR 111 184 -78 877 182 52 0 chr10 74541509 74541663 -71047625 + FRAM SINE Alu 1 161 -15 3749 149 1 11 chr10 74541670 74542316 -71046972 + L1MB3 LINE L1 5544 6183 0 1908 162 7 3 chr10 74543816 74544113 -71045175 - AluJb SINE Alu -14 298 1 562 240 7 20 chr10 74544139 74544285 -71045003 - L1MA10 LINE L1 -7 6327 6184 * 1845 206 81 77 chr10 74544284 74544876 -71044412 - L1MC4 LINE L1 -743 5403 5336 2234 125 3 6 chr10 74544876 74545188 -71044100 + AluSx SINE Alu 1 311 -1 1845 206 81 77 chr10 74545188 74545716 -71043572 - L1MC4 LINE L1 -810 5336 4812 1634 157 39 51 chr10 74545885 74546318 -71042970 - L1MC4 LINE L1 -1340 4806 4379 1008 114 0 0 chr10 74546319 74546495 -71042793 - AluSq SINE Alu 0 328 153 920 173 12 0 chr10 74546497 74546665 -71042623 - L1MC4 LINE L1 -1903 4243 4074 604 233 58 58 chr10 74547551 74547740 -71041548 + MIR SINE MIR 74 262 0 227 288 34 85 chr10 74547736 74547854 -71041434 - L2 LINE L2 -18 3254 3143 * 246 284 125 0 chr10 74548003 74548091 -71041197 + MIR SINE MIR 51 149 -59 1762 181 29 5 chr10 74548094 74548461 -71040827 + L1MB3 LINE L1 5785 6163 -20 2453 100 0 0 chr10 74548461 74548770 -71040518 - AluSg SINE Alu -1 309 1 289 219 114 19 chr10 74548913 74549018 -71040270 - MER91C DNA MER1_type 0 140 26 725 284 94 16 chr10 74549234 74549554 -71039734 - L2 LINE L2 -2 3311 2967 2020 166 40 44 chr10 74550036 74550525 -71038763 + L1PBa LINE L1 2014 2502 -4361 2407 82 3 0 chr10 74550525 74550818 -71038470 + AluSg SINE Alu 1 294 -16 2020 166 40 44 chr10 74550818 74550847 -71038441 + L1PBa LINE L1 2502 2530 -4333 635 209 78 7 chr10 74551333 74551486 -71037802 - Charlie1 DNA MER1_type -255 2506 2343 231 179 214 18 chr10 74551484 74551540 -71037748 - Charlie1 DNA MER1_type -2690 71 5 * 234 366 9 9 chr10 74551586 74551698 -71037590 - MIR SINE MIR -61 147 36 491 288 60 78 chr10 74551752 74552131 -71037157 - L1MEc LINE L1 -899 1591 1207 4605 47 0 0 chr10 74552131 74552710 -71036578 + L1PA6 LINE L1 5576 6154 0 491 288 60 78 chr10 74552710 74552915 -71036373 - L1MEc LINE L1 -1283 1207 1063 2420 115 0 0 chr10 74552915 74553227 -71036061 - AluSx SINE Alu 0 312 1 491 288 60 78 chr10 74553227 74553315 -71035973 - L1MEc LINE L1 -1427 1063 975 1280 218 51 25 chr10 74553563 74553917 -71035371 - MLT1A2 LTR MaLR -11 363 1 2318 105 0 3 chr10 74554059 74554364 -71034924 + AluSg SINE Alu 1 304 -6 3128 184 169 124 chr10 74554712 74555296 -71033992 - L1MD3 LINE L1 -9 7986 7429 473 209 26 0 chr10 74555296 74555411 -71033877 - MLT1F1 LTR MaLR -449 118 1 3128 184 169 124 chr10 74555411 74555596 -71033692 - L1MD3 LINE L1 -566 7429 7254 1920 178 0 0 chr10 74555596 74555905 -71033383 + AluSx SINE Alu 1 309 -3 3128 184 169 124 chr10 74555905 74556311 -71032977 - L1MD3 LINE L1 -741 7254 6629 2167 129 94 10 chr10 74556311 74556706 -71032582 + MSTC LTR MaLR 1 428 0 3128 184 169 124 chr10 74556706 74556791 -71032497 - L1MD3 LINE L1 -1366 6629 6549 977 211 29 20 chr10 74556857 74557103 -71032185 - L1ME2 LINE L1 -44 6120 5873 1330 190 45 103 chr10 74557104 74557524 -71031764 - MLT1C LTR MaLR 0 467 1 2060 225 8 42 chr10 74557526 74558051 -71031237 - L1ME2 LINE L1 -304 5860 5354 264 122 41 0 chr10 74558052 74558101 -71031187 + LTR10B LTR ERV1 1 51 -496 2425 121 163 8 chr10 74558124 74558596 -71030692 + LTR10A LTR ERV1 1 545 -64 472 224 61 0 chr10 74558619 74558766 -71030522 - L1ME2 LINE L1 -797 5349 5194 595 143 19 0 chr10 74558766 74558871 -71030417 - AluJb SINE Alu 0 312 206 299 278 63 8 chr10 74559156 74559282 -71030006 - L1MEd LINE L1 -5985 134 2 555 238 157 0 chr10 74560232 74560379 -71028909 - MER5A DNA MER1_type 0 189 20 392 212 59 123 chr10 74560424 74560594 -71028694 + MER5B DNA MER1_type 19 177 -1 244 309 229 20 chr10 74561643 74561844 -71027444 + MIR SINE MIR 1 243 -19 861 114 6 12 chr10 74561989 74562155 -71027133 + (TCCA)n Simple_repeat Simple_repeat 4 168 0 413 299 39 26 chr10 74562199 74562353 -71026935 - MER5A DNA MER1_type -33 156 1 219 93 139 0 chr10 74562366 74562409 -71026879 - MIR SINE MIR -62 146 98 189 353 0 0 chr10 74562957 74563025 -71026263 + MIR SINE MIR 33 100 -108 2166 97 30 20 chr10 74563119 74563419 -71025869 - AluSg SINE Alu -7 303 1 21 36 0 0 chr10 74563424 74563452 -71025836 + AT_rich Low_complexity Low_complexity 1 28 0 319 236 36 55 chr10 74563461 74563504 -71025784 + MER103 DNA DNA 1 43 -123 1133 227 101 30 chr10 74563504 74563940 -71025348 + MLT1C LTR MaLR 1 467 0 319 236 36 55 chr10 74563940 74564006 -71025282 + MER103 DNA DNA 43 108 -58 2368 68 4 0 chr10 74564038 74564349 -71024939 + AluY SINE Alu 1 312 0 750 243 154 0 chr10 74564841 74565055 -71024233 - MIR SINE MIR -13 249 3 194 350 12 0 chr10 74565094 74565174 -71024114 - L2 LINE L2 0 3313 3233 332 338 44 6 chr10 74565625 74565785 -71023503 - MIR SINE MIR -1 261 96 183 296 19 0 chr10 74565959 74566013 -71023275 + MIR SINE MIR 205 259 -3 180 299 147 6 chr10 74566290 74566447 -71022841 + L2 LINE L2 2885 3063 -209 417 222 209 7 chr10 74566582 74566735 -71022553 - MER5A DNA MER1_type 0 189 6 205 296 91 11 chr10 74566778 74566866 -71022422 - MER5B DNA MER1_type -35 143 49 1962 162 3 7 chr10 74567835 74568143 -71021145 + AluSx SINE Alu 1 307 -5 782 274 34 5 chr10 74568178 74568386 -71020902 - MIR SINE MIR -13 249 36 2582 136 19 7 chr10 74568708 74569128 -71020160 - MSTB LTR MaLR -1 425 1 385 275 0 124 chr10 74569548 74569667 -71019621 + MIR SINE MIR 20 108 -154 2671 36 10 3 chr10 74569667 74569975 -71019313 - AluY SINE Alu 0 311 2 385 275 0 124 chr10 74569975 74570048 -71019240 + MIR SINE MIR 108 188 -74 2083 129 94 32 chr10 74571281 74571684 -71017604 - MSTC LTR MaLR 0 428 1 190 240 147 0 chr10 74572071 74572146 -71017142 + MIR3 SINE MIR 109 194 -14 1719 172 7 21 chr10 74574311 74574621 -71014667 + AluJo SINE Alu 1 306 0 394 335 17 40 chr10 74575037 74575210 -71014078 + MIR SINE MIR 5 173 -89 220 261 80 45 chr10 74575255 74575343 -71013945 - MIR SINE MIR -2 260 170 352 61 0 0 chr10 74575763 74575812 -71013476 + MADE1 DNA Mariner 27 75 -5 271 321 69 0 chr10 74575993 74576124 -71013164 + MIR SINE MIR 120 259 -3 2335 99 3 3 chr10 74576252 74576556 -71012732 - AluSx SINE Alu -8 304 1 860 241 5 0 chr10 74577622 74577829 -71011459 + MER3 DNA MER1_type 1 208 -1 285 326 67 91 chr10 74578149 74578624 -71010664 + L2 LINE L2 2809 3272 0 251 280 40 0 chr10 74578726 74578801 -71010487 + MIR3 SINE MIR 112 189 -19 206 296 92 31 chr10 74579490 74579588 -71009700 - MIR SINE MIR -89 119 16 194 0 0 37 chr10 74580896 74580923 -71008365 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 236 51 0 26 chr10 74581439 74581478 -71007810 + (TCC)n Simple_repeat Simple_repeat 1 38 0 638 234 137 15 chr10 74583396 74583593 -71005695 + MIR SINE MIR 28 248 -14 297 351 13 20 chr10 74585176 74585327 -71003961 - MLT1K LTR MaLR 0 588 439 359 300 155 46 chr10 74585385 74585688 -71003600 - MLT1K LTR MaLR -238 350 15 322 276 49 8 chr10 74585729 74585885 -71003403 - MIR SINE MIR -64 144 29 266 321 12 0 chr10 74586306 74586387 -71002901 + MIR SINE MIR 65 146 -62 402 255 154 0 chr10 74586439 74586588 -71002700 + MER112 DNA MER1_type 27 198 -62 264 246 72 0 chr10 74586837 74586906 -71002382 + MIR3 SINE MIR 81 154 -54 860 302 62 33 chr10 74587708 74588009 -71001279 + MLT1L LTR MaLR 1 292 -323 2472 89 0 0 chr10 74588009 74588313 -71000975 + AluY SINE Alu 1 304 -7 860 302 62 33 chr10 74588313 74588565 -71000723 + MLT1L LTR MaLR 292 609 -6 1833 139 30 27 chr10 74588590 74588928 -71000360 - MER44D DNA MER2_type 0 609 1 573 339 95 15 chr10 74588933 74589479 -70999809 - L1MC4a LINE L1 -1926 5882 5293 2061 150 108 12 chr10 74589724 74590130 -70999158 + LTR36 LTR ERV1 2 446 -165 758 176 7 0 chr10 74590140 74590276 -70999012 + MLT1A1 LTR MaLR 228 364 -1 212 329 20 40 chr10 74591500 74591652 -70997636 + L2 LINE L2 2873 3021 -251 371 293 9 0 chr10 74591658 74591774 -70997514 + MER117 DNA MER1_type 81 197 0 338 346 43 12 chr10 74591989 74592151 -70997137 - MIR SINE MIR -76 186 20 268 284 21 53 chr10 74592266 74592361 -70996927 + MIR SINE MIR 80 171 -91 213 290 14 0 chr10 74592961 74593030 -70996258 - L2 LINE L2 0 3272 3203 533 255 0 32 chr10 74593260 74593417 -70995871 + MER117 DNA MER1_type 46 197 0 333 317 58 0 chr10 74593420 74593524 -70995764 + L2 LINE L2 3162 3271 -1 202 221 263 32 chr10 74593534 74593629 -70995659 - MIR SINE MIR -71 137 21 456 249 69 0 chr10 74595454 74595611 -70993677 - L2 LINE L2 -256 3016 2852 859 74 7 52 chr10 74595816 74595951 -70993337 + MER1B DNA MER1_type 211 339 0 283 311 74 8 chr10 74596336 74596458 -70992830 + MIR SINE MIR 23 142 -66 267 235 0 0 chr10 74596653 74596751 -70992537 + (CA)n Simple_repeat Simple_repeat 1 98 0 237 292 0 0 chr10 74596764 74596901 -70992387 + (CA)n Simple_repeat Simple_repeat 2 138 0 224 316 25 0 chr10 74597181 74597260 -70992028 - MIR3 SINE MIR -52 156 76 853 223 84 17 chr10 74598154 74598392 -70990896 - MIR SINE MIR 0 262 9 1737 137 3 68 chr10 74598495 74598816 -70990472 + AluJo SINE Alu 1 300 -12 271 279 143 4 chr10 74600284 74600420 -70988868 + MIR3 SINE MIR 22 181 -27 493 250 110 0 chr10 74600665 74600801 -70988487 + MER117 DNA MER1_type 1 151 -46 258 136 0 0 chr10 74601234 74601278 -70988010 + (TTCA)n Simple_repeat Simple_repeat 4 47 0 24 0 0 0 chr10 74602348 74602372 -70986916 + AT_rich Low_complexity Low_complexity 1 24 0 378 112 272 41 chr10 74602603 74602729 -70986559 + MIR3 SINE MIR 44 200 -8 1536 219 82 57 chr10 74602969 74603294 -70985994 - MER21B LTR ERV1 -338 525 183 2270 115 3 0 chr10 74603294 74603599 -70985689 + AluY SINE Alu 2 307 -4 1536 219 82 57 chr10 74603599 74603747 -70985541 - MER21B LTR ERV1 -680 183 40 30 69 0 0 chr10 74603756 74603814 -70985474 + AT_rich Low_complexity Low_complexity 1 58 0 287 162 176 14 chr10 74603852 74603926 -70985362 - MER21B LTR ERV1 -773 90 5 882 238 24 19 chr10 74603941 74604147 -70985141 - LTR16C LTR ERVL -218 273 67 237 329 0 12 chr10 74604176 74604261 -70985027 - L2 LINE L2 -50 3263 3180 578 254 79 6 chr10 74604332 74604509 -70984779 + MIR SINE MIR 29 218 -44 2236 102 7 0 chr10 74604668 74604963 -70984325 + AluSq SINE Alu 1 297 -16 378 241 108 0 chr10 74604975 74605058 -70984230 + REP3 LTR ERV 2 93 -469 552 210 101 7 chr10 74605110 74605248 -70984040 - MIR SINE MIR -66 196 46 220 186 76 0 chr10 74605940 74606006 -70983282 + MIR SINE MIR 42 118 -90 188 158 26 0 chr10 74606204 74606242 -70983046 - MIR SINE MIR -56 152 114 408 250 0 0 chr10 74606789 74606877 -70982411 + MIR SINE MIR 53 140 -122 195 276 0 0 chr10 74607624 74607700 -70981588 + (TG)n Simple_repeat Simple_repeat 1 76 0 241 341 47 8 chr10 74607892 74608021 -70981267 - L2 LINE L2 -73 3240 3107 186 189 0 0 chr10 74608422 74608459 -70980829 + CT-rich Low_complexity Low_complexity 4 40 0 200 290 72 0 chr10 74609322 74609391 -70979897 - MIR SINE MIR -15 247 174 212 245 0 0 chr10 74609575 74609624 -70979664 - MIR SINE MIR -85 123 75 253 264 0 0 chr10 74610503 74610556 -70978732 - L2 LINE L2 -7 3265 3213 850 278 24 4 chr10 74610902 74611157 -70978131 + MIR SINE MIR 3 262 0 429 351 5 27 chr10 74611196 74611384 -70977904 - MIR3 SINE MIR -10 198 15 212 299 15 0 chr10 74612087 74612154 -70977134 + MIR SINE MIR 36 103 -105 347 197 73 129 chr10 74612334 74612512 -70976776 - MLT1H LTR MaLR 0 549 382 269 278 28 0 chr10 74613342 74613414 -70975874 - MER115 DNA AcHobo -3 690 617 254 282 74 100 chr10 74614443 74614794 -70974494 - L2 LINE L2 0 3272 2931 378 313 129 41 chr10 74614874 74615465 -70973823 - L2 LINE L2 -449 2865 2223 289 283 45 61 chr10 74615498 74615696 -70973592 - MLT1L LTR MaLR 0 615 421 1141 318 32 53 chr10 74615979 74616718 -70972570 + L1MEc LINE L1 361 1084 -5637 2090 110 3 10 chr10 74616720 74617010 -70972278 + AluSx SINE Alu 1 288 -24 631 204 61 6 chr10 74617017 74617198 -70972090 + L1MEc LINE L1 1566 1756 -4784 2319 57 11 4 chr10 74617406 74617687 -70971601 + AluY SINE Alu 29 311 0 189 74 0 0 chr10 74619119 74619146 -70970142 + (CAA)n Simple_repeat Simple_repeat 3 29 0 2164 199 28 61 chr10 74619271 74619809 -70969479 - MLT1F LTR MaLR -22 520 1 505 320 83 45 chr10 74619818 74620089 -70969199 - L2 LINE L2 -1231 2083 1824 2382 150 19 5 chr10 74620089 74620194 -70969094 + Tigger2a DNA MER2_type 1 103 -2605 240 35 0 0 chr10 74620194 74620223 -70969065 + (TCC)n Simple_repeat Simple_repeat 2 30 0 2382 150 19 5 chr10 74620223 74620543 -70968745 + Tigger2a DNA MER2_type 103 432 -2 505 320 83 45 chr10 74620543 74620961 -70968327 - L2 LINE L2 -1490 1824 1368 301 312 236 11 chr10 74621197 74621578 -70967710 - L3 LINE CR1 -3 1574 1108 413 192 34 0 chr10 74622819 74622925 -70966363 + MLT1F-int LTR MaLR 1247 1621 -30 2001 217 73 12 chr10 74622960 74623454 -70965834 + MLT1F LTR MaLR 19 542 0 5189 52 9 0 chr10 74623850 74624846 -70964442 + L1P2 LINE L1 4674 5680 -474 213 331 71 39 chr10 74625295 74625449 -70963839 + L2 LINE L2 3106 3264 -8 794 246 95 12 chr10 74626049 74626301 -70962987 - MLT1K LTR MaLR -2 586 314 534 236 16 0 chr10 74626333 74626460 -70962828 + FLAM_A SINE Alu 10 138 -4 484 225 18 0 chr10 74627225 74627336 -70961952 + LTR16A LTR ERVL 225 337 -113 2257 127 0 0 chr10 74627549 74627856 -70961432 - AluSx SINE Alu -5 307 1 273 218 100 27 chr10 74628075 74628185 -70961103 - MIR SINE MIR -81 181 64 208 278 0 14 chr10 74628325 74628397 -70960891 + MIR SINE MIR 55 125 -83 430 304 43 33 chr10 74629040 74629224 -70960064 - MIR SINE MIR 0 262 77 638 173 95 34 chr10 74629632 74629811 -70959477 + MIR SINE MIR 73 262 0 395 239 51 90 chr10 74630519 74630753 -70958535 - MLT1K LTR MaLR -6 582 358 880 296 88 27 chr10 74631551 74632062 -70957226 + L2 LINE L2 2436 2977 -337 333 136 0 0 chr10 74632261 74632320 -70956968 + L1MA9 LINE L1 6245 6303 -9 285 323 86 27 chr10 74632345 74632531 -70956757 + L2 LINE L2 3104 3300 -13 222 118 0 0 chr10 74632531 74632565 -70956723 + (TGAA)n Simple_repeat Simple_repeat 1 34 0 189 308 54 11 chr10 74632745 74632891 -70956397 - MIR SINE MIR 0 262 110 181 237 53 40 chr10 74633134 74633210 -70956078 + MIR3 SINE MIR 3 79 -129 * 516 289 54 6 chr10 74633202 74633368 -70955920 - MIR SINE MIR -12 250 77 885 235 54 14 chr10 74635680 74635901 -70953387 + MIR SINE MIR 33 262 0 272 333 80 0 chr10 74636038 74636176 -70953112 + MIR SINE MIR 45 191 -58 572 264 88 22 chr10 74637018 74637245 -70952043 + MIR SINE MIR 21 262 0 1084 170 59 17 chr10 74637396 74637672 -70951616 + MER1B DNA MER1_type 1 339 0 182 387 32 16 chr10 74638007 74638131 -70951157 + L2 LINE L2 2934 3059 -213 304 79 0 0 chr10 74639198 74639236 -70950052 - tRNA-Trp tRNA tRNA -37 38 1 251 354 102 0 chr10 74639276 74639403 -70949885 - MIR SINE MIR -77 185 46 229 307 198 0 chr10 74639795 74639896 -70949392 - MIR SINE MIR -85 177 57 1039 138 22 31 chr10 74640686 74641008 -70948280 + L1MB8 LINE L1 5789 6178 0 373 255 89 89 chr10 74641198 74641570 -70947718 - L1ME3A LINE L1 -230 5940 5569 201 263 0 53 chr10 74641581 74641638 -70947650 - MIR SINE MIR -67 141 88 219 324 0 0 chr10 74642245 74642313 -70946975 + MER5A DNA MER1_type 4 71 -118 296 309 109 6 chr10 74642327 74642492 -70946796 - L2 LINE L2 -491 2823 2642 186 338 22 25 chr10 74644126 74644234 -70945054 + L2 LINE L2 2656 2761 -553 517 249 60 49 chr10 74644240 74644425 -70944863 - MER117 DNA MER1_type -3 194 8 832 269 98 24 chr10 74644630 74644977 -70944311 + MLT1J LTR MaLR 13 332 -114 236 325 12 12 chr10 74646260 74646340 -70942948 - L2 LINE L2 -4 3268 3189 297 232 85 0 chr10 74646536 74646618 -70942670 + MIR SINE MIR 156 244 -18 537 328 84 8 chr10 74647475 74647713 -70941575 - MIR SINE MIR -3 259 4 273 283 222 0 chr10 74648874 74648973 -70940315 - L2 LINE L2 0 3272 3152 354 309 73 0 chr10 74650168 74650278 -70939010 + MIR SINE MIR 143 260 -2 * 376 262 19 19 chr10 74650272 74650379 -70938909 - MIR SINE MIR -107 155 49 535 290 14 55 chr10 74650405 74650622 -70938666 + Charlie8 DNA MER1_type 11 218 -2199 297 327 19 10 chr10 74650817 74650921 -70938367 - MIR SINE MIR -88 120 16 730 259 43 93 chr10 74651487 74651862 -70937426 - L2 LINE L2 -100 3213 2858 1063 290 98 13 chr10 74651990 74652404 -70936884 + LTR16A LTR ERVL 6 442 -8 257 341 78 22 chr10 74652426 74652627 -70936661 - MIR SINE MIR -56 206 3 2794 165 54 26 chr10 74652776 74653280 -70936008 + MLT2B1 LTR ERVL 1 518 -2 274 325 138 8 chr10 74653284 74653407 -70935881 - L2 LINE L2 -510 2804 2666 2447 253 139 104 chr10 74653827 74654553 -70934735 + L2 LINE L2 826 1526 -1788 689 220 75 17 chr10 74654553 74654726 -70934562 - MER58A DNA MER1_type -38 186 4 2447 253 139 104 chr10 74654726 74655636 -70933652 + L2 LINE L2 1526 2696 -618 652 255 238 23 chr10 74655632 74655977 -70933311 + L2 LINE L2 2876 3294 -19 * 575 264 137 22 chr10 74655977 74656204 -70933084 + MER102a DNA MER1_type 78 330 0 182 282 51 26 chr10 74656770 74656848 -70932440 - MIR SINE MIR 0 262 183 401 280 72 21 chr10 74657007 74657184 -70932104 + MIR3 SINE MIR 30 165 -43 273 351 70 16 chr10 74658585 74658770 -70930518 - L2 LINE L2 -1 3312 3118 560 62 25 38 chr10 74658955 74659035 -70930253 + MADE1 DNA Mariner 2 80 0 417 288 30 0 chr10 74659062 74659194 -70930094 - MIR SINE MIR -118 144 9 901 201 18 31 chr10 74659240 74659464 -70929824 - MIR SINE MIR -26 236 16 509 313 65 8 chr10 74659481 74659727 -70929561 - L2 LINE L2 -431 2883 2624 284 259 148 0 chr10 74659971 74660079 -70929209 + L3 LINE CR1 1384 1507 -70 336 24 0 0 chr10 74661342 74661383 -70927905 + (TC)n Simple_repeat Simple_repeat 1 41 0 308 235 105 52 chr10 74661384 74661537 -70927751 + MER5A DNA MER1_type 7 167 -22 1045 226 4 36 chr10 74662110 74662362 -70926926 + MIR SINE MIR 3 246 -16 350 185 49 0 chr10 74662483 74662564 -70926724 - MIR SINE MIR -65 197 113 205 315 27 0 chr10 74663269 74663342 -70925946 + MIR SINE MIR 129 203 -59 1357 148 0 34 chr10 74663533 74663769 -70925519 - AluJo SINE Alu -55 257 30 21 57 0 0 chr10 74663808 74663843 -70925445 + AT_rich Low_complexity Low_complexity 1 35 0 418 201 79 29 chr10 74664462 74664601 -70924687 - L2 LINE L2 0 3313 3168 863 240 68 9 chr10 74664961 74665182 -70924106 - MIR SINE MIR 0 262 29 247 258 89 81 chr10 74665179 74665303 -70923985 - MIR3 SINE MIR -20 188 64 * 214 353 74 0 chr10 74665888 74666010 -70923278 - MIR SINE MIR -4 258 128 316 304 87 14 chr10 74667091 74667229 -70922059 - MIR SINE MIR -12 250 103 725 318 35 16 chr10 74669257 74669512 -70919776 - MIR SINE MIR 0 262 3 752 209 12 23 chr10 74670254 74670426 -70918862 - MIR SINE MIR -91 171 2 254 330 22 11 chr10 74670537 74670628 -70918660 - L3b LINE CR1 -132 1451 1360 231 363 0 0 chr10 74670628 74670708 -70918580 + MER117 DNA MER1_type 1 80 -117 180 0 0 0 chr10 74672257 74672277 -70917011 + (T)n Simple_repeat Simple_repeat 1 20 0 468 245 252 0 chr10 74674369 74674508 -70914780 - MIR SINE MIR -25 237 64 281 349 30 8 chr10 74675177 74675309 -70913979 - MIR SINE MIR -55 153 19 290 289 72 0 chr10 74675751 74675848 -70913440 - L2 LINE L2 -1 3271 3168 227 355 65 0 chr10 74675867 74675960 -70913328 - L2 LINE L2 -20 3252 3154 526 286 42 36 chr10 74676075 74676243 -70913045 - MIR SINE MIR -6 256 88 216 0 0 0 chr10 74676292 74676316 -70912972 + (TTTAA)n Simple_repeat Simple_repeat 2 25 0 1752 157 31 3 chr10 74676316 74676602 -70912686 - AluJb SINE Alu -18 294 1 907 212 69 0 chr10 74677084 74677287 -70912001 + MER20 DNA MER1_type 1 217 -2 481 352 56 9 chr10 74677483 74677699 -70911589 - MIR SINE MIR -12 250 25 293 241 40 13 chr10 74678073 74678168 -70911120 - MIR SINE MIR -39 169 71 915 226 26 0 chr10 74678265 74678455 -70910833 - MER63A DNA MER1_type -13 197 3 489 216 134 8 chr10 74678591 74678725 -70910563 - MER117 DNA MER1_type -43 154 4 242 273 50 72 chr10 74680452 74680591 -70908697 - MIR SINE MIR -46 216 81 613 75 0 0 chr10 74681099 74681179 -70908109 - MADE1 DNA Mariner 0 80 1 429 266 36 58 chr10 74681227 74681366 -70907922 - MIR SINE MIR -48 214 79 421 265 80 33 chr10 74681430 74681581 -70907707 - MIR SINE MIR -103 159 2 1085 208 38 4 chr10 74681899 74682135 -70907153 + MIR SINE MIR 15 258 -4 2406 80 0 0 chr10 74682259 74682561 -70906727 - AluSg SINE Alu -8 302 1 261 286 218 15 chr10 74682563 74682696 -70906592 - MIR SINE MIR -36 226 67 1273 163 102 1 chr10 74682709 74682974 -70906314 - MER1B DNA MER1_type 0 339 89 1091 254 6 75 chr10 74683962 74684321 -70904967 - MER102b DNA MER1_type -1 340 7 195 289 40 26 chr10 74684352 74684428 -70904860 + L2 LINE L2 3237 3313 0 370 328 90 19 chr10 74685208 74685433 -70903855 - MIR SINE MIR -21 241 3 184 357 0 0 chr10 74685484 74685540 -70903748 - MIR SINE MIR -110 98 43 269 270 20 9 chr10 74685569 74685724 -70903564 - MER117 DNA MER1_type -2 195 1 1615 155 31 24 chr10 74685822 74686113 -70903175 - AluJb SINE Alu -19 293 1 412 348 139 35 chr10 74686387 74686870 -70902418 - L1ME4a LINE L1 -1 6120 5588 191 350 25 25 chr10 74686966 74687086 -70902202 - MIR SINE MIR -69 139 20 205 291 0 70 chr10 74687812 74687898 -70901390 - L2 LINE L2 -7 3265 3186 * 627 277 49 5 chr10 74687896 74688080 -70901208 + MIR SINE MIR 71 262 0 393 262 89 98 chr10 74688105 74688382 -70900906 - L2 LINE L2 -129 3184 2884 902 197 83 0 chr10 74688382 74688442 -70900846 - MER3 DNA MER1_type 0 209 155 2007 139 0 16 chr10 74688442 74688786 -70900502 + AluSx SINE Alu 1 312 0 902 197 83 0 chr10 74688786 74688918 -70900370 - MER3 DNA MER1_type -54 155 1 393 262 89 98 chr10 74688918 74689063 -70900225 - L2 LINE L2 -429 2884 2739 568 226 37 53 chr10 74689388 74689664 -70899624 + LTR16A LTR ERVL 18 354 -96 255 321 107 14 chr10 74689998 74690138 -70899150 - MIR SINE MIR -109 153 1 23 0 0 0 chr10 74690879 74690902 -70898386 + AT_rich Low_complexity Low_complexity 1 23 0 444 279 144 42 chr10 74691872 74692087 -70897201 + MIR SINE MIR 26 262 0 212 219 14 55 chr10 74692849 74692922 -70896366 + GA-rich Low_complexity Low_complexity 2 71 0 180 271 34 0 chr10 74692932 74692991 -70896297 - MIR SINE MIR -19 243 183 334 299 85 30 chr10 74693061 74693225 -70896063 + MIR SINE MIR 1 173 -89 200 307 0 13 chr10 74693294 74693369 -70895919 + GA-rich Low_complexity Low_complexity 6 79 0 210 302 69 26 chr10 74694374 74694490 -70894798 - L2 LINE L2 -45 3227 3107 346 317 103 0 chr10 74694503 74694648 -70894640 - MER5A DNA MER1_type 0 189 30 2378 94 0 0 chr10 74694909 74695216 -70894072 + AluSx SINE Alu 6 312 0 571 245 28 0 chr10 74695765 74695908 -70893380 - MIR SINE MIR -5 257 111 200 237 0 0 chr10 74696017 74696055 -70893233 - MIR SINE MIR -141 121 84 198 345 0 0 chr10 74696072 74696127 -70893161 - L2 LINE L2 0 3272 3218 408 291 73 12 chr10 74696148 74696313 -70892975 + L2 LINE L2 2874 3048 -224 186 308 19 0 chr10 74696467 74696519 -70892769 + L2 LINE L2 3261 3313 0 695 282 15 72 chr10 74696652 74696784 -70892504 - MIR SINE MIR -4 258 147 972 194 56 10 chr10 74696784 74696980 -70892308 + MER3 DNA MER1_type 5 209 0 695 282 15 72 chr10 74696980 74697109 -70892179 - MIR SINE MIR -115 147 12 269 263 105 0 chr10 74697248 74697343 -70891945 + MIR3 SINE MIR 103 207 -1 632 292 113 37 chr10 74697974 74697991 -70891297 + L2 LINE L2 2673 2687 -585 1986 153 50 36 chr10 74697991 74698350 -70890938 - THE1B LTR MaLR 0 364 1 632 292 113 37 chr10 74698350 74698887 -70890401 + L2 LINE L2 2687 3272 0 181 349 15 0 chr10 74698983 74699049 -70890239 - L2 LINE L2 -104 3168 3102 251 305 76 44 chr10 74699131 74699380 -70889908 - L2 LINE L2 -212 3060 2804 665 296 50 0 chr10 74699819 74700018 -70889270 - MIR SINE MIR -6 256 48 717 321 75 46 chr10 74700213 74700668 -70888620 - L2 LINE L2 -5 3308 2841 483 273 0 0 chr10 74700984 74701094 -70888194 - MIR SINE MIR -110 152 43 369 283 137 14 chr10 74701865 74702077 -70887211 - Charlie8 DNA MER1_type -2179 238 1 1688 201 0 3 chr10 74702243 74702551 -70886737 + AluJb SINE Alu 1 307 -5 225 297 30 40 chr10 74702847 74702948 -70886340 + MIR3 SINE MIR 10 109 -99 407 105 0 13 chr10 74708351 74708427 -70880861 + (TC)n Simple_repeat Simple_repeat 2 76 0 423 0 0 0 chr10 74708427 74708474 -70880814 + (CA)n Simple_repeat Simple_repeat 1 47 0 2238 98 3 0 chr10 74709212 74709508 -70879780 - AluSx SINE Alu -15 297 1 337 287 31 47 chr10 74709530 74709659 -70879629 - MIR SINE MIR -64 144 18 638 291 91 4 chr10 74709731 74709961 -70879327 - MIR SINE MIR -12 250 1 875 227 120 0 chr10 74710029 74710245 -70879043 - MIR SINE MIR -19 243 2 294 250 0 36 chr10 74711141 74711225 -70878063 + CT-rich Low_complexity Low_complexity 1 81 0 345 265 182 0 chr10 74711938 74712070 -70877218 - MIR3 SINE MIR -5 203 48 925 246 23 54 chr10 74712441 74712696 -70876592 - MIR SINE MIR -1 261 10 333 317 161 21 chr10 74713209 74713406 -70875882 - MIR SINE MIR -34 228 5 492 322 137 51 chr10 74714172 74714881 -70874407 - L2 LINE L2 -4 3268 2301 725 220 14 57 chr10 74714905 74715114 -70874174 - MER63A DNA MER1_type -2 208 9 785 330 103 72 chr10 74715514 74716136 -70873152 + L1M4 LINE L1 4724 5364 -782 543 309 62 5 chr10 74716960 74717154 -70872134 - MIR SINE MIR -34 228 24 355 254 121 62 chr10 74718830 74718978 -70870310 - MIR SINE MIR -56 152 6 337 102 0 6 chr10 74721016 74721073 -70868215 + MER51B LTR ERV1 236 286 -91 204 97 0 0 chr10 74721073 74721104 -70868184 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 180 0 0 0 chr10 74721890 74721910 -70867378 + (TCCC)n Simple_repeat Simple_repeat 2 21 0 1848 165 0 22 chr10 74721914 74722230 -70867058 - AluJb SINE Alu -3 309 1 228 303 11 11 chr10 74722914 74723003 -70866285 + Charlie8 DNA MER1_type 188 276 -2141 225 304 0 33 chr10 74723663 74723755 -70865533 + L1ME1 LINE L1 6048 6136 -30 32 43 0 0 chr10 74723763 74723809 -70865479 + AT_rich Low_complexity Low_complexity 1 46 0 267 261 11 11 chr10 74723859 74723947 -70865341 + (TATATG)n Simple_repeat Simple_repeat 3 90 0 281 289 13 0 chr10 74724059 74724135 -70865153 + MIR SINE MIR 186 262 0 187 341 74 17 chr10 74724450 74724626 -70864662 + L2 LINE L2 1612 1797 -1517 * 217 387 36 0 chr10 74724620 74724731 -70864557 + L2 LINE L2 2951 3065 -207 182 369 18 0 chr10 74724758 74724787 -70864501 + L2 LINE L2 3154 3181 -91 2350 93 3 0 chr10 74724787 74725097 -70864191 - AluSx SINE Alu 0 312 2 182 369 18 0 chr10 74725097 74725178 -70864110 + L2 LINE L2 3181 3266 -6 314 176 12 82 chr10 74725623 74725708 -70863580 + MLT1E1 LTR MaLR 91 169 -424 1206 211 66 29 chr10 74725801 74726193 -70863095 + MLT1E1 LTR MaLR 177 652 -2 278 311 207 36 chr10 74726193 74726415 -70862873 + L3 LINE CR1 1303 1562 -15 182 190 35 69 chr10 74726891 74726949 -70862339 - MIR SINE MIR -99 163 108 337 218 175 25 chr10 74727048 74727213 -70862075 - MIR SINE MIR -38 224 37 505 348 59 8 chr10 74727952 74728188 -70861100 - MIR SINE MIR -1 261 14 1338 188 134 43 chr10 74729347 74729741 -70859547 + L1ME2 LINE L1 5732 6161 -3 1949 130 28 0 chr10 74729790 74730075 -70859213 - AluSx SINE Alu -19 293 1 1112 184 28 28 chr10 74731409 74731627 -70857661 + MER20 DNA MER1_type 2 219 0 2958 86 86 14 chr10 74732470 74732903 -70856385 + MER4C LTR ERV1 1 464 -1 246 315 56 0 chr10 74735553 74735696 -70853592 + MER103 DNA DNA 8 158 -8 28 0 0 0 chr10 74735701 74735729 -70853559 + AT_rich Low_complexity Low_complexity 1 28 0 2296 149 10 8 chr10 74736542 74736937 -70852351 + MLT1C LTR MaLR 72 467 0 323 252 122 41 chr10 74737003 74737150 -70852138 - MIR3 SINE MIR -37 171 13 1409 241 40 50 chr10 74737156 74737534 -70851754 - MLT1A2 LTR MaLR 0 374 1 605 178 20 14 chr10 74738418 74738564 -70850724 - MER103 DNA DNA -7 159 13 180 0 0 0 chr10 74740016 74740036 -70849252 + (GGA)n Simple_repeat Simple_repeat 3 22 0 191 370 14 0 chr10 74740912 74740985 -70848303 - MIR SINE MIR -87 121 48 286 321 48 30 chr10 74742680 74742848 -70846440 - MIR SINE MIR -12 250 80 182 347 80 0 chr10 74743448 74743523 -70845765 + MIR3 SINE MIR 86 166 -42 657 294 94 0 chr10 74746410 74746645 -70842643 + MIR SINE MIR 6 262 0 282 253 0 19 chr10 74747943 74748042 -70841246 + MIR SINE MIR 17 111 -97 555 302 167 19 chr10 74748877 74749135 -70840153 - L3 LINE CR1 -15 1562 1267 208 263 53 0 chr10 74749895 74749952 -70839336 + MIR SINE MIR 35 94 -168 1129 150 25 15 chr10 74749962 74750194 -70839094 + MSTD LTR MaLR 1 236 -221 226 169 77 31 chr10 74750289 74750354 -70838934 + MSTD LTR MaLR 112 179 -217 1391 193 36 14 chr10 74750373 74750648 -70838640 + MSTD LTR MaLR 116 396 0 306 296 59 15 chr10 74750650 74750785 -70838503 + MIR SINE MIR 121 261 -1 2481 94 0 0 chr10 74750922 74751229 -70838059 + AluSc SINE Alu 3 309 0 471 266 156 78 chr10 74751262 74751698 -70837590 + MLT1H LTR MaLR 80 549 0 187 254 36 18 chr10 74752447 74752502 -70836786 + MIR SINE MIR 87 142 -66 219 69 0 0 chr10 74753026 74753055 -70836233 + (A)n Simple_repeat Simple_repeat 1 29 0 205 257 110 64 chr10 74755537 74755646 -70833642 + MIR SINE MIR 38 151 -111 340 290 91 95 chr10 74755756 74755987 -70833301 + MER102b DNA MER1_type 112 341 0 284 380 41 0 chr10 74757052 74757173 -70832115 - MIR SINE MIR -63 145 20 268 315 117 0 chr10 74757576 74757687 -70831601 + MIR SINE MIR 125 248 -14 429 267 0 0 chr10 74758498 74758599 -70830689 + MIR SINE MIR 57 157 -105 * 706 225 126 0 chr10 74758598 74758780 -70830508 - MIR SINE MIR 0 262 58 7106 218 24 32 chr10 74758918 74759567 -70829721 - L1M4 LINE L1 -5035 1820 1167 2502 66 3 7 chr10 74759567 74759869 -70829419 - AluY SINE Alu -10 301 1 7106 218 24 32 chr10 74759869 74760058 -70829230 - L1M4 LINE L1 -5688 1167 978 1971 157 3 3 chr10 74760058 74760358 -70828930 + AluSx SINE Alu 1 300 -12 7106 218 24 32 chr10 74760358 74761356 -70827932 - L1M4 LINE L1 -5877 978 7 2034 151 0 16 chr10 74761625 74761972 -70827316 + AluSx SINE Alu 1 312 0 611 150 0 0 chr10 74762000 74762100 -70827188 + MLT2B2 LTR ERVL 1 100 -415 * 908 202 24 85 chr10 74762091 74762305 -70826983 + MLT2B1 LTR ERVL 289 488 -32 1728 190 10 22 chr10 74762305 74762616 -70826672 - AluJb SINE Alu -5 307 1 908 202 24 85 chr10 74762616 74762648 -70826640 + MLT2B1 LTR ERVL 488 520 0 23 33 0 0 chr10 74763037 74763067 -70826221 + AT_rich Low_complexity Low_complexity 1 30 0 893 228 12 0 chr10 74763074 74763241 -70826047 - AluJb SINE Alu -8 304 136 2144 108 6 44 chr10 74763355 74763537 -70825751 - AluSx SINE Alu -7 305 139 2651 58 0 0 chr10 74763537 74763846 -70825442 - AluY SINE Alu -2 309 1 2144 108 6 44 chr10 74763846 74763979 -70825309 - AluSx SINE Alu -173 139 2 2228 113 10 0 chr10 74764000 74764300 -70824988 - AluSq SINE Alu -10 303 1 334 322 35 20 chr10 74764300 74764499 -70824789 - L1ME LINE L1 -423 6092 5891 278 103 0 0 chr10 74765182 74765221 -70824067 - MER66A LTR ERV1 0 478 440 1782 172 30 3 chr10 74766137 74766433 -70822855 + AluJb SINE Alu 1 304 -8 23 0 0 0 chr10 74767206 74767229 -70822059 + AT_rich Low_complexity Low_complexity 1 23 0 340 331 93 15 chr10 74767495 74767827 -70821461 - L1MC/D LINE L1 -2048 5760 5403 513 145 9 8 chr10 74767861 74767953 -70821335 + MLT1J LTR MaLR 42 174 -275 771 160 0 8 chr10 74768126 74768251 -70821037 - FLAM_A SINE Alu -9 124 1 408 308 60 14 chr10 74768283 74768479 -70820809 - L1ME LINE L1 -752 5788 5636 462 18 0 0 chr10 74768488 74768543 -70820745 + (TCTCCC)n Simple_repeat Simple_repeat 5 59 0 4889 74 38 7 chr10 74768543 74769236 -70820052 + SVA Other Other 57 770 -616 6289 62 19 19 chr10 74769442 74770265 -70819023 + SVA Other Other 561 1383 -3 1447 202 31 3 chr10 74770370 74770722 -70818566 - LTR37A LTR ERV1 -52 374 13 568 330 116 18 chr10 74771079 74771473 -70817815 - L1ME LINE L1 -971 5569 5142 645 272 24 39 chr10 74771475 74771806 -70817482 - L1MC5 LINE L1 -48 7913 7588 266 286 32 71 chr10 74771791 74772102 -70817186 - L1ME LINE L1 -1370 5170 4872 * 353 295 40 22 chr10 74772140 74772279 -70817009 - L1MDa LINE L1 -4059 2481 2358 440 105 0 23 chr10 74772795 74772881 -70816407 + (GGAA)n Simple_repeat Simple_repeat 3 86 0 327 264 14 0 chr10 74773075 74773147 -70816141 - MIR SINE MIR -1 261 189 282 260 192 0 chr10 74775119 74775223 -70814065 - MIR3 SINE MIR -23 185 62 899 273 72 33 chr10 74775744 74776141 -70813147 - Charlie8 DNA MER1_type -1022 1395 1 559 206 27 76 chr10 74776307 74776491 -70812797 + MER5B DNA MER1_type 2 176 -2 312 349 86 0 chr10 74779299 74779451 -70809837 - MIR SINE MIR -7 255 91 2323 92 0 0 chr10 74779536 74779829 -70809459 - AluSx SINE Alu -19 293 1 1921 178 0 9 chr10 74781055 74781420 -70807868 + AluJb SINE Alu 1 362 0 2418 76 3 28 chr10 74782473 74782790 -70806498 + AluSg SINE Alu 1 309 -1 2340 91 0 7 chr10 74783463 74783770 -70805518 - AluSc SINE Alu -4 305 1 217 248 40 50 chr10 74784843 74784944 -70804344 - MIR SINE MIR -71 137 38 2218 105 10 3 chr10 74785869 74786164 -70803124 - AluSx SINE Alu -15 297 1 543 96 0 0 chr10 74786609 74786692 -70802596 + (TG)n Simple_repeat Simple_repeat 2 84 0 225 0 0 0 chr10 74787529 74787554 -70801734 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 2272 87 0 0 chr10 74787556 74787832 -70801456 - AluSx SINE Alu -36 276 1 473 249 113 17 chr10 74787982 74788052 -70801236 - MIR SINE MIR -6 256 194 1909 169 0 17 chr10 74788052 74788348 -70800940 - AluJo SINE Alu -21 291 1 473 249 113 17 chr10 74788348 74788454 -70800834 - MIR SINE MIR -68 194 63 195 308 0 0 chr10 74788965 74789085 -70800203 + (CA)n Simple_repeat Simple_repeat 1 120 0 241 212 26 88 chr10 74793244 74793357 -70795931 - MIR3 SINE MIR -9 199 94 195 42 0 0 chr10 74796109 74796133 -70793155 + (TTTTG)n Simple_repeat Simple_repeat 1 24 0 207 250 97 14 chr10 74796751 74796823 -70792465 + MIR SINE MIR 69 146 -62 1527 130 0 22 chr10 74796825 74797056 -70792232 + AluJo SINE Alu 87 312 0 619 162 186 73 chr10 74797209 74797413 -70791875 - ORSL DNA AcHobo -46 229 3 472 310 52 17 chr10 74798865 74799039 -70790249 + MIR3 SINE MIR 14 193 -15 191 171 29 0 chr10 74800319 74800354 -70788934 - L2 LINE L2 -20 3252 3217 238 283 150 0 chr10 74801833 74801946 -70787342 + MER94 DNA DNA 1 130 -4 2290 104 0 7 chr10 74803974 74804281 -70785007 + AluSx SINE Alu 1 305 -7 414 0 0 0 chr10 74804281 74804327 -70784961 + (TA)n Simple_repeat Simple_repeat 2 47 0 250 252 236 24 chr10 74808356 74808483 -70780805 + MIR3 SINE MIR 3 156 -52 236 309 36 0 chr10 74809187 74809271 -70780017 + MIR SINE MIR 37 123 -85 309 250 130 0 chr10 74809943 74810035 -70779253 - MIR3 SINE MIR -18 190 87 1159 186 173 24 chr10 74810761 74811132 -70778156 - LTR37A LTR ERV1 0 426 1 182 277 108 0 chr10 74811941 74812024 -70777264 + MIR3 SINE MIR 65 156 -52 892 196 65 135 chr10 74812479 74813036 -70776252 + L1MC4 LINE L1 7519 8036 -6 453 230 153 24 chr10 74813047 74813256 -70776032 + HAL1 LINE L1 1529 1764 -743 6425 216 22 40 chr10 74813500 74814863 -70774425 + L1MB7 LINE L1 1 1333 -5209 2109 134 10 0 chr10 74814863 74815161 -70774127 + AluSx SINE Alu 1 301 -11 6425 216 22 40 chr10 74815161 74815413 -70773875 + L1MB7 LINE L1 1333 1588 -4954 1518 140 22 0 chr10 74815413 74815641 -70773647 + AluSg/x SINE Alu 78 310 0 1068 240 128 0 chr10 74815657 74815953 -70773335 + L1M4 LINE L1 2610 2943 -3701 1923 279 65 27 chr10 74815957 74816584 -70772704 + L1M4 LINE L1 7 657 -6132 3790 220 42 23 chr10 74816934 74817916 -70771372 + L1M4 LINE L1 1270 2269 -4520 976 156 12 17 chr10 74817922 74818095 -70771193 + LTR9 LTR ERV1 441 612 0 3216 145 17 19 chr10 74818100 74818624 -70770664 + HUERS-P3 LTR ERV1 5 527 -8392 899 176 11 28 chr10 74818624 74818800 -70770488 + LTR9 LTR ERV1 357 529 -83 1605 206 108 32 chr10 74818808 74818942 -70770346 + L1MB7 LINE L1 1781 1903 -4741 1826 141 54 3 chr10 74818942 74819239 -70770049 + AluSx SINE Alu 1 312 0 1605 206 108 32 chr10 74819239 74819911 -70769377 + L1MB7 LINE L1 1903 2652 -3992 661 217 0 0 chr10 74819916 74820036 -70769252 + FLAM_C SINE Alu 13 132 -11 346 146 29 29 chr10 74820048 74820151 -70769137 + GA-rich Low_complexity Low_complexity 4 106 0 990 257 16 4 chr10 74820162 74820407 -70768881 + L1MB7 LINE L1 4101 4348 -2296 * 1302 184 26 29 chr10 74820392 74820438 -70768850 + L1MB7 LINE L1 4866 4911 -1733 2401 86 7 0 chr10 74820438 74820739 -70768549 + AluSx SINE Alu 1 303 -9 1302 184 26 29 chr10 74820739 74821034 -70768254 + L1MB7 LINE L1 4911 5206 -1438 * 2808 144 28 57 chr10 74821029 74821365 -70767923 + L1MB7 LINE L1 5769 6113 -569 1757 162 0 11 chr10 74821365 74821636 -70767652 + AluJb SINE Alu 35 302 -10 2808 144 28 57 chr10 74821636 74821773 -70767515 + L1MB7 LINE L1 6113 6224 -458 2005 128 3 13 chr10 74821773 74822071 -70767217 + AluSx SINE Alu 1 295 -17 2808 144 28 57 chr10 74822071 74822194 -70767094 + L1MB7 LINE L1 6224 6349 -333 1419 175 93 15 chr10 74822194 74822463 -70766825 - AluJb SINE Alu -16 296 7 661 284 138 51 chr10 74822616 74823197 -70766091 + L1M4 LINE L1 3392 3921 -2867 2141 101 17 7 chr10 74823197 74823485 -70765803 - AluSq SINE Alu -22 291 1 661 284 138 51 chr10 74823485 74824387 -70764901 + L1M4 LINE L1 3921 5004 -1784 411 28 0 103 chr10 74824430 74824537 -70764751 + (GGAA)n Simple_repeat Simple_repeat 3 98 0 3461 245 62 31 chr10 74824569 74826009 -70763279 + L1ME LINE L1 3 1487 -4593 1824 169 6 16 chr10 74826009 74826323 -70762965 + AluJo SINE Alu 1 311 -1 3461 245 62 31 chr10 74826323 74826382 -70762906 + L1ME LINE L1 1487 1543 -4537 196 313 109 43 chr10 74826620 74826850 -70762438 + L2 LINE L2 2525 2769 -545 1236 94 0 6 chr10 74826852 74827012 -70762276 - AluSg/x SINE Alu -12 298 140 1857 88 24 24 chr10 74827020 74827316 -70761972 - AluY SINE Alu -15 296 1 1074 169 11 5 chr10 74829401 74829590 -70759698 + AluJb SINE Alu 120 309 -3 1743 236 47 20 chr10 74829604 74830160 -70759128 - L1M4 LINE L1 -3307 2839 2269 515 188 188 0 chr10 74830193 74830319 -70758969 + FLAM_A SINE Alu 1 144 0 313 105 0 5 chr10 74830323 74830381 -70758907 - L1MB2 LINE L1 -15 6168 6101 960 207 54 38 chr10 74831795 74832109 -70757179 + L1MB7 LINE L1 3168 3486 -2660 1331 193 15 35 chr10 74832109 74832368 -70756920 + AluJb SINE Alu 1 254 -58 4172 224 22 18 chr10 74832368 74833473 -70755815 + L1MB7 LINE L1 4141 5249 -897 4650 151 40 22 chr10 74833956 74834830 -70754458 + L1MB7 LINE L1 5276 6165 -19 405 216 11 0 chr10 74834879 74834967 -70754321 + L1ME2 LINE L1 6076 6164 0 5368 178 73 38 chr10 74836274 74836909 -70752379 + L1MCa LINE L1 32 730 -5696 2399 80 0 13 chr10 74836909 74837209 -70752079 + AluY SINE Alu 1 296 -15 5368 178 73 38 chr10 74837209 74837743 -70751545 + L1MCa LINE L1 730 1243 -5183 404 117 70 16 chr10 74838646 74838774 -70750514 + GA-rich Low_complexity Low_complexity 5 139 0 657 69 0 0 chr10 74838822 74838909 -70750379 + (TTTCC)n Simple_repeat Simple_repeat 2 88 0 779 162 0 0 chr10 74838910 74839021 -70750267 - FLAM_C SINE Alu -27 116 6 1709 161 7 0 chr10 74839068 74839354 -70749934 - L1MB3 LINE L1 -7 6176 5889 3624 172 19 18 chr10 74839355 74840410 -70748878 - L1MB3 LINE L1 -521 5662 4608 2272 125 0 0 chr10 74840413 74840717 -70748571 - AluSx SINE Alu -8 304 1 207 288 38 30 chr10 74841033 74841165 -70748123 + A-rich Low_complexity Low_complexity 6 138 0 245 282 6 58 chr10 74841207 74841363 -70747925 + GA-rich Low_complexity Low_complexity 1 148 0 263 137 0 20 chr10 74841477 74841528 -70747760 + (GGAA)n Simple_repeat Simple_repeat 1 50 0 5777 150 28 13 chr10 74841529 74842542 -70746746 + L1MC1 LINE L1 5297 6324 -9 10871 126 43 18 chr10 74842542 74845640 -70743648 + L1PB1 LINE L1 2 3316 -3546 736 102 83 0 chr10 74845641 74845749 -70743539 + AluSp SINE Alu 2 118 -195 251 179 13 51 chr10 74845888 74845966 -70743322 + GA-rich Low_complexity Low_complexity 1 75 0 556 228 92 29 chr10 74846127 74846333 -70742955 + L1M4 LINE L1 1214 1432 -4952 2163 186 22 26 chr10 74846339 74846916 -70742372 - L1M4 LINE L1 -452 5726 5152 2223 199 51 11 chr10 74846932 74847496 -70741792 + L1M4 LINE L1 4875 5436 -946 1723 92 13 21 chr10 74847500 74847738 -70741550 + AluSx SINE Alu 1 236 -76 12117 174 21 25 chr10 74847824 74848549 -70740739 + L1PB1 LINE L1 3296 4022 -2845 2392 77 7 0 chr10 74848549 74848849 -70740439 + AluY SINE Alu 1 302 -9 12117 174 21 25 chr10 74848849 74851326 -70737962 + L1PB1 LINE L1 4022 6484 -383 351 0 0 0 chr10 74851326 74851365 -70737923 + (TG)n Simple_repeat Simple_repeat 2 40 0 12117 174 21 25 chr10 74851365 74851748 -70737540 + L1PB1 LINE L1 6484 6867 0 289 301 16 47 chr10 74851803 74851996 -70737292 + HAL1b LINE L1 90 276 -1072 1552 153 8 0 chr10 74852002 74852250 -70737038 + L1MA3 LINE L1 6041 6290 -15 32 0 0 23 chr10 74852253 74852266 -70737022 + AT_rich Low_complexity Low_complexity 1 13 -29 2324 93 3 0 chr10 74852266 74852556 -70736732 - AluSp SINE Alu -22 291 1 32 0 0 23 chr10 74852556 74852585 -70736703 + AT_rich Low_complexity Low_complexity 13 42 0 1921 155 3 0 chr10 74852596 74852892 -70736396 + AluJb SINE Alu 1 297 -15 189 0 0 0 chr10 74852901 74852922 -70736366 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 644 304 48 31 chr10 74852922 74853280 -70736008 + HAL1b LINE L1 270 633 -715 2241 97 13 7 chr10 74853518 74853816 -70735472 - AluSg SINE Alu -10 300 1 1473 181 28 129 chr10 74854062 74854449 -70734839 + MER7A DNA MER2_type 1 346 0 1688 141 0 4 chr10 74854475 74854751 -70734537 - AluSx SINE Alu 0 312 38 2285 228 75 65 chr10 74854807 74855694 -70733594 + L1MC5 LINE L1 6633 7528 -433 2027 248 123 22 chr10 74855777 74856405 -70732883 + L1MEc LINE L1 16 706 -5690 2399 233 90 47 chr10 74856413 74857402 -70731886 + L1MEc LINE L1 882 1913 -4483 402 266 43 63 chr10 74857395 74857602 -70731686 + L1ME3A LINE L1 5918 6120 -50 * 752 219 0 0 chr10 74858020 74858148 -70731140 + FLAM_C SINE Alu 3 130 -3 1440 102 66 37 chr10 74858153 74858397 -70730891 + AluSx SINE Alu 1 251 -61 301 340 78 7 chr10 74859525 74859678 -70729610 - MIR3 SINE MIR -28 180 17 30 27 0 0 chr10 74859801 74859838 -70729450 + AT_rich Low_complexity Low_complexity 1 37 0 691 224 112 0 chr10 74859928 74860107 -70729181 - MIR SINE MIR -1 261 63 4934 155 34 62 chr10 74862739 74862796 -70726492 - L1MA9 LINE L1 -5 6307 6250 4597 55 0 0 chr10 74862796 74863327 -70725961 - L1PA5 LINE L1 0 6154 5624 1721 170 91 9 chr10 74863327 74863645 -70725643 - MER2 DNA MER2_type 0 344 1 4934 155 34 62 chr10 74863645 74863961 -70725327 - L1MA9 LINE L1 -61 6251 5928 2218 114 0 13 chr10 74863961 74864267 -70725021 - AluSx SINE Alu -10 302 1 4934 155 34 62 chr10 74864267 74864415 -70724873 - L1MA9 LINE L1 -384 5928 5777 306 53 0 0 chr10 74864415 74864453 -70724835 - MADE1 DNA Mariner -42 38 1 453 36 0 0 chr10 74864458 74864513 -70724775 + (CA)n Simple_repeat Simple_repeat 2 56 0 4934 155 34 62 chr10 74864513 74864993 -70724295 - L1MA9 LINE L1 -539 5773 5308 207 0 0 0 chr10 74864993 74865016 -70724272 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 4934 155 34 62 chr10 74865016 74865470 -70723818 - L1MA9 LINE L1 -1004 5308 4843 2111 162 61 56 chr10 74865898 74865968 -70723320 - MSTA LTR MaLR 0 428 360 3762 52 19 9 chr10 74865968 74866429 -70722859 + L1PA8 LINE L1 5707 6172 0 2111 162 61 56 chr10 74866429 74866784 -70722504 - MSTA LTR MaLR -68 360 1 9720 39 1 4 chr10 74867930 74869004 -70720284 - MER11C LTR ERVK 0 1071 1 600 50 0 0 chr10 74869055 74869135 -70720153 + (TTCC)n Simple_repeat Simple_repeat 1 80 0 2117 111 42 0 chr10 74869345 74869634 -70719654 - AluSx SINE Alu -11 301 1 1303 186 99 19 chr10 74869714 74869852 -70719436 - Cheshire DNA MER1_type 0 2420 2295 234 0 0 0 chr10 74869852 74869878 -70719410 + (TAA)n Simple_repeat Simple_repeat 3 28 0 1303 186 99 19 chr10 74869878 74870062 -70719226 - Cheshire DNA MER1_type -125 2295 2072 547 250 0 41 chr10 74870061 74870113 -70719175 - Cheshire DNA MER1_type -2255 165 112 * 1794 173 3 22 chr10 74870113 74870431 -70718857 - AluJb SINE Alu 0 312 1 547 250 0 41 chr10 74870431 74870550 -70718738 - Cheshire DNA MER1_type -2308 112 1 762 221 84 121 chr10 74870609 74871098 -70718190 - HAL1 LINE L1 -33 2474 2004 876 203 0 0 chr10 74871583 74871741 -70717547 - AluSg/x SINE Alu -18 294 137 807 189 0 0 chr10 74871914 74872041 -70717247 - FLAM_C SINE Alu -6 127 1 253 299 159 0 chr10 74872351 74872458 -70716830 + MIR SINE MIR 21 144 -64 23 54 0 0 chr10 74872623 74872660 -70716628 + AT_rich Low_complexity Low_complexity 1 37 0 669 183 0 0 chr10 74872665 74872769 -70716519 + FLAM_C SINE Alu 2 105 -38 7412 34 3 16 chr10 74872769 74873623 -70715665 + L1PA3 LINE L1 5308 6150 -5 613 231 122 55 chr10 74873717 74873955 -70715333 - MIR SINE MIR -1 261 8 864 140 0 22 chr10 74873957 74874093 -70715195 - FRAM SINE Alu -14 162 30 323 337 55 12 chr10 74874228 74874391 -70714897 - L3 LINE CR1 -8 1569 1400 2035 169 28 17 chr10 74874868 74875194 -70714094 + MLT1A1 LTR MaLR 1 333 -32 2033 176 27 0 chr10 74875194 74875529 -70713759 - MER2 DNA MER2_type 0 344 1 2035 169 28 17 chr10 74875529 74875563 -70713725 + MLT1A1 LTR MaLR 333 365 0 21 0 0 0 chr10 74876444 74876465 -70712823 + AT_rich Low_complexity Low_complexity 1 21 0 955 135 0 0 chr10 74876468 74876601 -70712687 - FLAM_C SINE Alu 0 133 1 1182 168 0 50 chr10 74877451 74877671 -70711617 - AluJo SINE Alu -12 300 92 24 0 0 0 chr10 74877949 74877973 -70711315 + AT_rich Low_complexity Low_complexity 1 24 0 204 103 73 73 chr10 74878072 74878140 -70711148 + (CCCCAG)n Simple_repeat Simple_repeat 3 70 0 182 111 0 0 chr10 74879494 74879521 -70709767 - L2 LINE L2 -6 3266 3240 604 165 0 9 chr10 74879526 74879635 -70709653 - FLAM_A SINE Alu 0 142 35 1029 278 78 21 chr10 74879774 74880209 -70709079 + L1MC4a LINE L1 5496 5955 -1853 813 150 23 0 chr10 74880363 74880530 -70708758 - AluSc SINE Alu 0 313 144 323 91 0 0 chr10 74880530 74880585 -70708703 - AluSg/x SINE Alu -132 170 122 218 191 11 180 chr10 74881246 74881335 -70707953 - L2 LINE L2 -1 3312 3239 571 249 91 37 chr10 74881896 74882137 -70707151 - MIR SINE MIR -1 261 8 23 0 0 0 chr10 74882781 74882804 -70706484 + AT_rich Low_complexity Low_complexity 1 23 0 190 196 0 22 chr10 74883329 74883375 -70705913 - L3b LINE CR1 -11 1572 1528 2401 87 7 0 chr10 74883522 74883820 -70705468 - AluSx SINE Alu -12 300 1 1973 126 10 10 chr10 74884241 74884550 -70704738 + AluSx SINE Alu 1 309 -3 881 213 38 0 chr10 74884993 74885153 -70704135 + FRAM SINE Alu 1 166 0 1176 131 120 0 chr10 74886949 74887140 -70702148 + L1PB1 LINE L1 5907 6120 -31 189 0 0 0 chr10 74887161 74887182 -70702106 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 2170 120 0 10 chr10 74888242 74888541 -70700747 + AluSx SINE Alu 1 296 -16 2693 112 0 3 chr10 74888659 74889015 -70700273 + THE1A LTR MaLR 1 355 0 1844 101 3 140 chr10 74889175 74889532 -70699756 - AluY SINE Alu -3 308 1 872 233 201 29 chr10 74889534 74889942 -70699346 + HAL1 LINE L1 813 1290 -1217 432 260 164 39 chr10 74890057 74890179 -70699109 + HAL1 LINE L1 1543 1648 -859 1687 123 46 102 chr10 74890179 74890503 -70698785 + AluJb SINE Alu 1 306 -6 432 260 164 39 chr10 74890503 74890692 -70698596 + HAL1 LINE L1 1648 1893 -614 2990 208 56 13 chr10 74890833 74891445 -70697843 - MER82 DNA MER2_type -14 639 2 265 292 36 48 chr10 74891738 74891906 -70697382 + HAL1b LINE L1 714 879 -469 232 214 135 56 chr10 74892043 74892169 -70697119 + HAL1 LINE L1 2227 2362 -145 2620 220 35 11 chr10 74892416 74892984 -70696304 - MER119 DNA MER1_type -1 582 1 445 158 18 79 chr10 74893111 74893225 -70696063 - MER104 DNA Tc2 -73 107 1 2064 120 20 3 chr10 74894642 74894942 -70694346 - AluSq SINE Alu -8 305 1 612 206 0 0 chr10 74895117 74895258 -70694030 + (TG)n Simple_repeat Simple_repeat 1 141 0 189 291 105 8 chr10 74895587 74895699 -70693589 - MIR SINE MIR -7 201 78 6235 102 77 85 chr10 74895699 74896829 -70692459 - Tigger3b DNA MER2_type -1797 1231 109 2090 127 0 0 chr10 74896829 74897132 -70692156 + AluSx SINE Alu 1 303 0 6235 102 77 85 chr10 74897132 74897203 -70692085 - Tigger3b DNA MER2_type -2919 109 39 2406 112 31 25 chr10 74898682 74899040 -70690248 + THE1B LTR MaLR 5 364 0 1136 172 68 11 chr10 74899082 74899478 -70689810 - MLT1D LTR MaLR 0 505 1 23 0 0 0 chr10 74900726 74900749 -70688539 + AT_rich Low_complexity Low_complexity 1 23 0 343 164 68 0 chr10 74901291 74901364 -70687924 - MER5A DNA MER1_type -102 87 10 2141 88 0 52 chr10 74901439 74901746 -70687542 + AluSx SINE Alu 2 292 -20 1062 41 8 0 chr10 74901746 74901868 -70687420 + AluY SINE Alu 1 123 -188 24 32 0 0 chr10 74901868 74901899 -70687389 + AT_rich Low_complexity Low_complexity 1 31 0 257 326 21 0 chr10 74901899 74901992 -70687296 - MER5A DNA MER1_type -49 140 33 232 231 185 0 chr10 74902749 74902814 -70686474 + MIR SINE MIR 183 259 -3 232 339 110 0 chr10 74903107 74903225 -70686063 - L2 LINE L2 -3 3269 3139 460 151 151 9 chr10 74903385 74903491 -70685797 - MER5B DNA MER1_type -51 127 7 369 0 0 0 chr10 74903721 74903762 -70685526 + (CA)n Simple_repeat Simple_repeat 1 41 0 2385 84 3 0 chr10 74904153 74904449 -70684839 + AluSp SINE Alu 1 297 -16 224 263 59 40 chr10 74904483 74904609 -70684679 - L2 LINE L2 -876 2438 2307 1743 156 3 61 chr10 74904609 74904756 -70684532 + AluJo SINE Alu 1 120 -192 2313 112 0 10 chr10 74904756 74905069 -70684219 + AluSq SINE Alu 2 311 -2 1743 156 3 61 chr10 74905069 74905248 -70684040 + AluJo SINE Alu 120 308 -4 295 282 53 24 chr10 74905254 74905452 -70683836 + MIR SINE MIR 2 259 -3 1314 81 25 0 chr10 74905952 74906150 -70683138 + L1MA2 LINE L1 6102 6304 0 3359 123 12 80 chr10 74906168 74906293 -70682995 + L1MB4 LINE L1 5551 5683 -497 2535 55 13 0 chr10 74906293 74906602 -70682686 + AluSp SINE Alu 1 313 0 3359 123 12 80 chr10 74906602 74907137 -70682151 + L1MB4 LINE L1 5683 6166 -14 283 310 10 0 chr10 74907140 74907240 -70682048 + Charlie4 DNA MER1_type 1861 1961 0 471 189 24 71 chr10 74908403 74908530 -70680758 + MER91B DNA MER1_type 10 130 -60 809 149 11 103 chr10 74908561 74908736 -70680552 + AluSg/x SINE Alu 135 293 -17 1763 156 0 21 chr10 74908757 74909040 -70680248 - AluJb SINE Alu -12 300 24 298 232 0 0 chr10 74909047 74909103 -70680185 + MER91B DNA MER1_type 135 190 0 873 188 135 96 chr10 74909496 74909873 -70679415 + LTR37B LTR ERV1 9 400 -68 777 196 14 0 chr10 74909873 74910016 -70679272 + AluJb SINE Alu 145 289 -23 1195 179 144 12 chr10 74910599 74910856 -70678432 - AluJb SINE Alu -11 291 1 301 243 0 0 chr10 74910856 74910930 -70678358 - MER31-int LTR ERV1 -2494 2629 2556 472 228 59 43 chr10 74910971 74911284 -70678004 - MER31-int LTR ERV1 -3521 1415 1192 296 156 156 9 chr10 74911297 74911406 -70677882 - AluSc SINE Alu -2 297 173 1244 77 18 12 chr10 74911687 74911856 -70677432 - THE1C LTR MaLR -205 170 1 604 266 96 7 chr10 74912855 74913126 -70676162 + L1MCa LINE L1 2064 2358 -4068 642 209 0 0 chr10 74913135 74913245 -70676043 + FLAM_A SINE Alu 4 113 -29 592 251 33 47 chr10 74913265 74913480 -70675808 + L1MCa LINE L1 2390 2601 -4006 339 276 99 46 chr10 74914501 74914526 -70674762 + L1ME LINE L1 43 65 -6005 645 227 8 8 chr10 74914526 74914654 -70674634 + FLAM_A SINE Alu 1 128 -5 339 276 99 46 chr10 74914654 74914780 -70674508 + L1ME LINE L1 65 202 -5868 260 197 141 14 chr10 74915487 74915558 -70673730 - L2 LINE L2 -7 3265 3186 465 363 0 20 chr10 74915717 74915918 -70673370 + LTR67 LTR ERVL 65 261 -296 350 300 50 0 chr10 74916025 74916145 -70673143 + LTR67 LTR ERVL 432 557 0 1997 166 9 50 chr10 74916252 74916673 -70672615 - L1MD3 LINE L1 -22 7973 7570 2641 146 39 0 chr10 74916677 74917087 -70672201 - MSTB LTR MaLR 0 426 1 220 189 75 0 chr10 74917095 74917148 -70672140 - MIR SINE MIR -147 115 59 319 282 86 0 chr10 74917606 74917723 -70671565 + L2 LINE L2 3137 3263 -9 240 35 0 0 chr10 74918261 74918290 -70670998 + (TG)n Simple_repeat Simple_repeat 1 29 0 566 197 8 25 chr10 74919833 74919955 -70669333 - MER34 LTR ERV1 -421 121 2 345 223 146 0 chr10 74920231 74920334 -70668954 - L2 LINE L2 -2 3311 3194 341 283 51 43 chr10 74920501 74920639 -70668649 + MIR SINE MIR 51 189 -73 206 234 0 0 chr10 74920689 74920736 -70668552 + (AATTG)n Simple_repeat Simple_repeat 5 51 0 7394 139 25 41 chr10 74920965 74922372 -70666916 - L1P LINE L1 -4075 2071 688 302 216 125 0 chr10 74922499 74922587 -70666701 + MIR SINE MIR 56 154 -108 1235 287 84 23 chr10 74922778 74923207 -70666081 + MLT1J LTR MaLR 56 510 -1 6010 202 10 1 chr10 74923787 74924853 -70664435 + LTR49-int LTR ERV1 715 1790 -6023 322 206 43 22 chr10 74925457 74925549 -70663739 - HAL1 LINE L1 -343 2164 2071 1168 114 148 0 chr10 74926359 74926535 -70662753 - AluSx SINE Alu -110 202 1 6700 26 18 0 chr10 74927799 74929094 -70660194 - L1PA3 LINE L1 -225 5930 4613 1525 108 0 5 chr10 74929228 74929432 -70659856 - AluSq SINE Alu -110 203 1 277 299 104 34 chr10 74929433 74929731 -70659557 + L1M4 LINE L1 3802 4120 -2026 558 279 108 28 chr10 74929755 74930042 -70659246 + L2 LINE L2 2238 2547 -767 222 175 18 35 chr10 74930459 74930516 -70658772 + CT-rich Low_complexity Low_complexity 5 60 0 509 207 122 58 chr10 74931166 74931413 -70657875 - LTR41 LTR ERVL 0 795 513 350 198 222 60 chr10 74931721 74931888 -70657400 - LTR41 LTR ERVL -579 194 1 7683 171 43 40 chr10 74932103 74933794 -70655494 + LTR49-int LTR ERV1 4074 5769 -562 956 166 12 6 chr10 74934940 74935103 -70654185 - FRAM SINE Alu -16 160 1 1707 154 28 11 chr10 74935848 74936134 -70653154 + AluJb SINE Alu 2 292 -20 272 200 50 0 chr10 74936174 74936234 -70653054 - FAM SINE Alu -1 178 116 445 299 13 39 chr10 74936319 74936714 -70652574 + CT-rich Low_complexity Low_complexity 1 384 0 272 229 12 0 chr10 74936736 74936819 -70652469 + C-rich Low_complexity Low_complexity 2 85 0 315 191 0 0 chr10 74937107 74937175 -70652113 + A-rich Low_complexity Low_complexity 1 68 0 185 109 73 0 chr10 74937187 74937242 -70652046 + CT-rich Low_complexity Low_complexity 1 59 0 * 397 109 0 82 chr10 74937232 74937342 -70651946 + (TTTCC)n Simple_repeat Simple_repeat 2 102 0 1383 217 25 3 chr10 74937357 74937643 -70651645 - AluJo SINE Alu -10 292 1 514 221 66 16 chr10 74938394 74938516 -70650772 - FLAM_A SINE Alu -2 131 4 373 253 102 18 chr10 74939366 74939532 -70649756 - L1MC4 LINE L1 -175 7867 7688 218 344 50 22 chr10 74941593 74941773 -70647515 + MIR SINE MIR 20 204 -58 659 195 0 0 chr10 74941852 74941975 -70647313 + AluJb SINE Alu 167 289 -23 2233 96 10 3 chr10 74942196 74942487 -70646801 - AluSq SINE Alu -8 305 13 1131 141 0 0 chr10 74943193 74943356 -70645932 - AluSg/x SINE Alu -14 296 134 1895 137 3 47 chr10 74943787 74944108 -70645180 - AluJo SINE Alu -5 307 1 7321 131 44 29 chr10 74944562 74945522 -70643766 - Tigger1 DNA MER2_type -1 2417 1434 2538 7 0 0 chr10 74945522 74945792 -70643496 - AluYa5 SINE Alu -5 306 37 7321 131 44 29 chr10 74945792 74946065 -70643223 - Tigger1 DNA MER2_type -984 1434 1166 361 143 0 0 chr10 74947199 74947255 -70642033 - Tigger1 DNA MER2_type -1236 1182 1127 228 0 0 0 chr10 74947257 74947283 -70642005 - Tigger1 DNA MER2_type -1260 1158 1133 1750 110 99 14 chr10 74947283 74947565 -70641723 - Tigger1 DNA MER2_type -1252 1166 861 2582 162 209 7 chr10 74947575 74948130 -70641158 - Tigger1 DNA MER2_type -1750 668 2 182 98 37 49 chr10 74948340 74948422 -70640866 + (CGGGG)n Simple_repeat Simple_repeat 4 84 0 907 111 0 8 chr10 74948748 74948874 -70640414 - AluJb SINE Alu -187 125 1 30 27 0 0 chr10 74948967 74949004 -70640284 + AT_rich Low_complexity Low_complexity 1 37 0 280 244 17 78 chr10 74949055 74949170 -70640118 + L1ME4a LINE L1 5964 6071 -50 21 71 0 0 chr10 74949515 74949557 -70639731 + AT_rich Low_complexity Low_complexity 1 42 0 417 313 13 62 chr10 74949989 74950216 -70639072 - MER102b DNA MER1_type 0 341 126 325 272 37 0 chr10 74950754 74950835 -70638453 - MER94 DNA DNA -4 130 47 2388 91 7 3 chr10 74950856 74951163 -70638125 - AluSg SINE Alu -2 308 1 1773 157 7 33 chr10 74951597 74951897 -70637391 - AluJo SINE Alu -14 298 7 306 244 222 51 chr10 74951934 74952168 -70637120 + L2 LINE L2 2036 2309 -1005 354 345 162 24 chr10 74952414 74952797 -70636491 + L2 LINE L2 2836 3271 -1 22 0 0 0 chr10 74952957 74952979 -70636309 + AT_rich Low_complexity Low_complexity 1 22 0 1679 134 0 13 chr10 74953525 74953764 -70635524 + AluSx SINE Alu 1 236 -76 183 329 14 43 chr10 74953869 74953939 -70635349 + L2 LINE L2 3238 3305 -8 189 107 0 0 chr10 74954278 74954306 -70634982 + (T)n Simple_repeat Simple_repeat 1 28 0 309 278 105 56 chr10 74954810 74955003 -70634285 - MIR SINE MIR -46 216 21 225 0 0 0 chr10 74957002 74957027 -70632261 + (T)n Simple_repeat Simple_repeat 1 25 0 1828 141 13 20 chr10 74958433 74958739 -70630549 + AluSx SINE Alu 1 304 -8 2123 109 32 0 chr10 74958915 74959199 -70630089 + AluSg SINE Alu 2 294 -16 252 0 0 0 chr10 74959468 74959496 -70629792 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 1647 188 0 4 chr10 74959504 74959776 -70629512 - AluJo SINE Alu -37 275 5 2460 46 0 0 chr10 74960110 74960420 -70628868 + AluY SINE Alu 1 310 0 1079 216 92 10 chr10 74960604 74960909 -70628379 + MER58B DNA MER1_type 9 338 -3 644 163 34 20 chr10 74962298 74962445 -70626843 + LTR29 LTR ERV1 425 573 -49 238 248 159 18 chr10 74963028 74963141 -70626147 + MIR3 SINE MIR 65 193 -15 205 217 0 22 chr10 74963399 74963445 -70625843 - MIR SINE MIR -115 147 103 2060 134 0 26 chr10 74964891 74965196 -70624092 - AluSx SINE Alu -15 297 1 634 280 131 36 chr10 74965247 74965522 -70623766 + AluJo SINE Alu 1 301 -1 204 40 0 0 chr10 74965537 74965562 -70623726 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 567 204 0 0 chr10 74965566 74965654 -70623634 - FRAM SINE Alu -22 154 67 813 152 0 23 chr10 74965660 74965792 -70623496 - FLAM_C SINE Alu -7 136 8 262 269 13 13 chr10 74965797 74965875 -70623413 + MIR SINE MIR 169 246 -16 27 0 0 0 chr10 74965888 74965915 -70623373 + AT_rich Low_complexity Low_complexity 1 27 0 366 122 116 2 chr10 74966356 74966435 -70622853 + AluJ/FRAM SINE Alu 223 296 -6 1993 137 4 0 chr10 74966447 74966725 -70622563 + AluJb SINE Alu 13 291 -21 2758 157 51 13 chr10 74966750 74967278 -70622010 - L1MB7 LINE L1 -58 6126 5579 225 65 0 0 chr10 74967449 74967480 -70621808 + (CA)n Simple_repeat Simple_repeat 2 32 0 232 200 40 0 chr10 74969273 74969323 -70619965 + C-rich Low_complexity Low_complexity 6 57 0 531 0 0 0 chr10 74969631 74969690 -70619598 + (GA)n Simple_repeat Simple_repeat 2 60 0 511 275 58 19 chr10 74969832 74970039 -70619249 - L2 LINE L2 -8 3305 3091 1941 128 60 13 chr10 74970039 74970359 -70618929 + AluJo SINE Alu 1 312 0 248 212 18 142 chr10 74970563 74970597 -70618691 + MIR SINE MIR 148 185 -77 2122 113 28 0 chr10 74970597 74970888 -70618400 + AluSq SINE Alu 1 299 -14 248 212 18 142 chr10 74970888 74970966 -70618322 + MIR SINE MIR 185 246 -16 489 278 40 21 chr10 74971070 74971285 -70618003 - MIR SINE MIR 0 262 45 1870 122 49 0 chr10 74971318 74971581 -70617707 - AluSx SINE Alu -36 276 1 292 273 56 43 chr10 74972687 74972848 -70616440 - MLT1J1 LTR MaLR 0 446 284 1810 128 95 0 chr10 74972892 74973060 -70616228 - AluJo SINE Alu -13 299 94 369 0 0 0 chr10 74973060 74973101 -70616187 + (TG)n Simple_repeat Simple_repeat 2 42 0 1810 128 95 0 chr10 74973101 74973205 -70616083 - AluJo SINE Alu -218 94 1 181 254 246 31 chr10 74973390 74973520 -70615768 + L2 LINE L2 2950 3107 -165 2315 96 36 33 chr10 74973601 74973964 -70615324 - THE1B LTR MaLR 0 364 1 234 235 102 61 chr10 74974029 74974127 -70615161 + MIR SINE MIR 45 146 -62 3092 122 45 36 chr10 74974165 74974714 -70614574 - MER21A LTR ERV1 -2 929 376 722 175 226 9 chr10 74974719 74974936 -70614352 - MER21A LTR ERV1 -667 264 1 1915 162 7 0 chr10 74975349 74975657 -70613631 + AluJo SINE Alu 1 310 -2 676 245 39 15 chr10 74976834 74977038 -70612250 + L2 LINE L2 3092 3300 -13 441 0 0 0 chr10 74977038 74977087 -70612201 + (TGAA)n Simple_repeat Simple_repeat 1 49 0 1275 229 23 23 chr10 74977143 74977493 -70611795 - L1MD3 LINE L1 -19 7976 7627 923 139 0 0 chr10 74977505 74977642 -70611646 - FRAM SINE Alu 0 40 1 780 191 0 8 chr10 74977646 74977772 -70611516 - FLAM_C SINE Alu -17 126 2 932 173 16 65 chr10 74977772 74977957 -70611331 - FRAM SINE Alu -1 175 1 317 226 0 0 chr10 74977957 74978019 -70611269 - L1MC4 LINE L1 -491 7551 7490 269 172 62 0 chr10 74978019 74978083 -70611205 + MADE1 DNA Mariner 1 68 -12 597 206 85 42 chr10 74978089 74978278 -70611010 - L1MC4 LINE L1 -555 7487 7291 714 188 8 0 chr10 74978290 74978407 -70610881 - FLAM_C SINE Alu -15 118 1 522 211 184 0 chr10 74978500 74978647 -70610641 + L1MC4a LINE L1 6422 6595 -1213 307 261 101 70 chr10 74978672 74978929 -70610359 + MER102b DNA MER1_type 72 336 -5 274 188 0 0 chr10 74978977 74979025 -70610263 - MIR SINE MIR -131 77 30 250 305 191 34 chr10 74979450 74979712 -70609576 + L2 LINE L2 2962 3264 -8 500 310 102 14 chr10 74979799 74980015 -70609273 - MIR SINE MIR -26 236 2 234 308 121 0 chr10 74980570 74980661 -70608627 + MIR3 SINE MIR 15 116 -92 579 271 91 15 chr10 74980719 74980918 -70608370 - MIR SINE MIR 0 262 49 207 159 0 68 chr10 74981085 74981129 -70608159 - MIR SINE MIR -89 119 81 207 227 13 40 chr10 74982166 74982241 -70607047 + (CGCGG)n Simple_repeat Simple_repeat 2 74 0 21 0 0 0 chr10 74982296 74982317 -70606971 + GC_rich Low_complexity Low_complexity 1 21 0 1669 99 0 0 chr10 74982738 74982950 -70606338 - AluSx SINE Alu -100 212 1 435 222 0 19 chr10 74983554 74983716 -70605572 + (CA)n Simple_repeat Simple_repeat 1 159 0 2436 74 0 13 chr10 74984241 74984540 -70604748 + AluSx SINE Alu 3 297 -15 1026 249 154 29 chr10 74984687 74985097 -70604191 - MLT1J LTR MaLR -50 461 1 1073 55 0 79 chr10 74985156 74985321 -70603967 - FRAM SINE Alu 0 176 25 792 230 218 0 chr10 74986089 74986346 -70602942 - MER5C DNA MER1_type -5 319 7 291 181 62 83 chr10 74986346 74986490 -70602798 + Charlie7 DNA MER1_type 2472 2612 0 2344 96 7 0 chr10 74986812 74987113 -70602175 + AluSx SINE Alu 1 303 -9 1399 185 45 0 chr10 74987412 74987704 -70601584 + MLT1A1 LTR MaLR 1 305 -60 1009 176 0 0 chr10 74987705 74987875 -70601413 + FRAM SINE Alu 1 170 -6 377 149 0 30 chr10 74987879 74987946 -70601342 + MLT1A1 LTR MaLR 300 364 -1 249 211 53 35 chr10 74988367 74988424 -70600864 + MER3 DNA MER1_type 29 86 -123 934 108 13 70 chr10 74988424 74988581 -70600707 - FRAM SINE Alu -17 159 12 545 188 194 0 chr10 74988596 74988740 -70600548 - MER3 DNA MER1_type -83 126 2 2581 57 0 0 chr10 74990505 74990803 -70598485 + AluY SINE Alu 1 298 -13 1675 219 62 11 chr10 74991355 74991821 -70597467 - L1ME3A LINE L1 0 6170 5681 204 266 31 16 chr10 74992482 74992546 -70596742 + MIR3 SINE MIR 2 66 -142 599 250 150 18 chr10 74992608 74992828 -70596460 + MIR SINE MIR 14 262 0 397 206 206 46 chr10 74992940 74993246 -70596042 - L1MC5 LINE L1 -39 7922 7568 852 134 0 16 chr10 74993246 74993373 -70595915 + FLAM_A SINE Alu 1 125 -8 1822 161 9 32 chr10 74993380 74993696 -70595592 + AluJo SINE Alu 3 311 -1 508 240 7 7 chr10 74993696 74993850 -70595438 + GA-rich Low_complexity Low_complexity 1 154 0 1050 262 69 48 chr10 74993857 74994319 -70594969 - L1MC5 LINE L1 -385 7576 7105 2199 162 65 22 chr10 74995984 74996028 -70593260 - L1MB5 LINE L1 -8 6172 6131 2353 121 0 0 chr10 74996028 74996335 -70592953 - AluSx SINE Alu -5 307 1 2199 162 65 22 chr10 74996335 74996447 -70592841 - L1MB5 LINE L1 -49 6131 6025 4829 64 20 2 chr10 74996447 74997044 -70592244 - LTR14B LTR ERVK 0 608 1 2199 162 65 22 chr10 74997044 74997391 -70591897 - L1MB5 LINE L1 -155 6025 5661 191 333 37 22 chr10 74997716 74997851 -70591437 - L2 LINE L2 -481 2833 2697 2301 114 3 3 chr10 74997857 74998165 -70591123 + AluSg SINE Alu 3 310 0 877 141 0 16 chr10 74998797 74998925 -70590363 - FLAM_C SINE Alu -16 127 2 364 315 65 22 chr10 74998926 74999344 -70589944 + L1MEd LINE L1 1112 1633 -857 231 359 76 16 chr10 74999787 74999813 -70589475 + L1MEd LINE L1 447 470 -5649 2111 127 7 0 chr10 74999813 75000112 -70589176 + AluSp SINE Alu 1 301 -12 231 359 76 16 chr10 75000112 75000269 -70589019 + L1MEd LINE L1 470 641 -5478 225 233 0 81 chr10 75000272 75000358 -70588930 - HsTC2 DNA Tc2 -1816 82 4 215 300 88 0 chr10 75000536 75000616 -70588672 - L2 LINE L2 -1 3312 3226 2163 84 3 21 chr10 75001956 75002241 -70587047 + AluSq SINE Alu 24 303 -10 207 155 10 204 chr10 75003386 75003489 -70585799 + MER5B DNA MER1_type 51 133 -45 1851 159 43 7 chr10 75003499 75003800 -70585488 + AluJb SINE Alu 1 312 0 2295 167 110 2 chr10 75003810 75004266 -70585022 - MLT1D LTR MaLR 0 505 1 232 159 135 40 chr10 75005164 75005262 -70584026 + MER5A DNA MER1_type 4 115 -74 1635 142 19 71 chr10 75006169 75006493 -70582795 + AluJo SINE Alu 6 312 0 2418 82 0 0 chr10 75006549 75006843 -70582445 + AluSx SINE Alu 1 294 -18 2087 113 7 7 chr10 75008806 75009116 -70580172 + AluSx SINE Alu 2 311 0 2465 73 7 0 chr10 75010033 75010335 -70578953 - AluSp SINE Alu -9 304 1 2201 131 3 0 chr10 75011046 75011351 -70577937 + AluSx SINE Alu 1 306 -6 357 236 79 47 chr10 75013568 75013695 -70575593 - MIR SINE MIR -61 147 17 376 303 242 0 chr10 75013940 75014138 -70575150 + MIR SINE MIR 17 262 0 306 207 17 0 chr10 75014239 75014297 -70574991 + MER21B LTR ERV1 13 71 -792 343 254 0 0 chr10 75014325 75014396 -70574892 + MER21B LTR ERV1 19 89 -774 2354 216 134 27 chr10 75014399 75015140 -70574148 + MER21B LTR ERV1 43 862 -1 261 0 0 0 chr10 75016785 75016814 -70572474 + (A)n Simple_repeat Simple_repeat 1 29 0 186 43 0 0 chr10 75016818 75016841 -70572447 + (CAGGG)n Simple_repeat Simple_repeat 2 24 0 347 129 69 119 chr10 75017196 75017297 -70571991 + 7SLRNA srpRNA srpRNA 225 320 0 85 0 0 10 chr10 75017297 75017370 -70571918 + AT_rich Low_complexity Low_complexity 1 74 -21 2335 110 0 0 chr10 75017370 75017670 -70571618 + AluSp SINE Alu 1 300 -13 85 0 0 10 chr10 75017670 75017692 -70571596 + AT_rich Low_complexity Low_complexity 74 95 0 659 301 99 0 chr10 75018266 75018479 -70570809 + MIR SINE MIR 18 251 -11 2128 126 23 0 chr10 75018578 75018879 -70570409 - AluSx SINE Alu -4 308 1 267 246 61 79 chr10 75020079 75020193 -70569095 - L2 LINE L2 -5 3267 3156 1462 143 210 9 chr10 75020451 75020779 -70568509 + MSTD LTR MaLR 3 396 0 241 288 0 0 chr10 75020821 75020880 -70568408 - AluJo SINE Alu -135 167 109 735 129 0 0 chr10 75020880 75020981 -70568307 + AluJ/FLAM SINE Alu 2 102 -210 2371 88 7 7 chr10 75021531 75021838 -70567450 - AluSx SINE Alu -5 307 1 506 296 63 11 chr10 75021896 75022085 -70567203 - MIR SINE MIR 0 262 64 374 244 0 0 chr10 75022106 75022184 -70567104 - MIR SINE MIR -56 206 129 482 259 76 122 chr10 75022192 75022536 -70566752 + L1MC/D LINE L1 4502 4829 -1317 25 0 0 0 chr10 75023069 75023094 -70566194 + AT_rich Low_complexity Low_complexity 1 25 0 414 267 70 74 chr10 75023203 75023297 -70565991 + L1MC/D LINE L1 5026 5119 -1027 1922 107 0 38 chr10 75023297 75023614 -70565674 + AluSg SINE Alu 6 310 0 414 267 70 74 chr10 75023614 75023843 -70565445 + L1MC/D LINE L1 5119 5373 -773 2095 101 6 73 chr10 75023843 75024170 -70565118 - AluSx SINE Alu -7 305 1 305 227 11 57 chr10 75024226 75024314 -70564974 + L1MC4 LINE L1 6614 6697 -1345 338 127 70 0 chr10 75024337 75024408 -70564880 + L1MC/D LINE L1 5406 5481 -2327 860 157 65 7 chr10 75024430 75024583 -70564705 + AluJb SINE Alu 125 286 -26 617 285 140 0 chr10 75024604 75024811 -70564477 - L2 LINE L2 -246 3067 2832 1777 227 55 49 chr10 75024823 75025334 -70563954 - LTR40a LTR ERVL -5 514 1 299 230 115 0 chr10 75025334 75025421 -70563867 - L2 LINE L2 -491 2823 2727 723 212 0 8 chr10 75025828 75025960 -70563328 - FLAM_C SINE Alu -1 132 2 1631 182 37 10 chr10 75025969 75026265 -70563023 - AluJo SINE Alu -8 304 1 1140 114 0 0 chr10 75026673 75026822 -70562466 - AluSc SINE Alu -160 149 1 2071 101 37 14 chr10 75026831 75027127 -70562161 - AluSc SINE Alu -6 303 1 823 184 0 0 chr10 75027846 75027971 -70561317 + FLAM_C SINE Alu 1 125 -18 476 297 0 16 chr10 75027987 75028115 -70561173 - L2 LINE L2 0 3313 3188 27 0 0 0 chr10 75028136 75028163 -70561125 + AT_rich Low_complexity Low_complexity 1 27 0 1413 211 39 4 chr10 75028177 75028457 -70560831 - AluJo SINE Alu -22 290 1 1922 151 0 3 chr10 75028541 75028855 -70560433 + AluJb SINE Alu 1 313 0 388 286 39 104 chr10 75029390 75029621 -70559667 + L1ME4a LINE L1 5874 6089 -32 783 183 8 0 chr10 75029623 75029754 -70559534 - FLAM_C SINE Alu -11 132 1 2166 127 3 0 chr10 75029800 75030100 -70559188 + AluSc SINE Alu 1 301 -8 7995 156 31 54 chr10 75030100 75031071 -70558217 + L1MC3 LINE L1 6068 7059 -726 1731 184 7 7 chr10 75031071 75031381 -70557907 + AluJo SINE Alu 1 310 -2 7995 156 31 54 chr10 75031381 75031804 -70557484 + L1MC3 LINE L1 7059 7490 -295 2217 109 7 7 chr10 75031804 75032106 -70557182 + AluSq SINE Alu 1 302 -11 7995 156 31 54 chr10 75032106 75032173 -70557115 + L1MC3 LINE L1 7490 7557 -228 2151 123 3 3 chr10 75032173 75032466 -70556822 + AluSx SINE Alu 1 293 -19 7995 156 31 54 chr10 75032466 75032523 -70556765 + L1MC3 LINE L1 7557 7614 -171 2418 103 0 3 chr10 75032523 75032835 -70556453 + AluSp SINE Alu 1 311 -2 7995 156 31 54 chr10 75032835 75032890 -70556398 + L1MC3 LINE L1 7614 7669 -116 1724 181 36 13 chr10 75032890 75033194 -70556094 + AluJb SINE Alu 1 311 -1 7995 156 31 54 chr10 75033194 75033366 -70555922 + L1MC3 LINE L1 7669 7778 -7 462 258 145 0 chr10 75033602 75033726 -70555562 + MIR SINE MIR 26 167 -95 268 303 11 45 chr10 75033714 75033790 -70555498 + L2 LINE L2 3227 3301 -12 * 1705 199 10 0 chr10 75033790 75034087 -70555201 + AluJb SINE Alu 1 300 -12 268 303 11 45 chr10 75034087 75034099 -70555189 + L2 LINE L2 3301 3312 -1 437 211 0 9 chr10 75034101 75034210 -70555078 + GA-rich Low_complexity Low_complexity 4 111 0 619 188 5 38 chr10 75034373 75034559 -70554729 + GA-rich Low_complexity Low_complexity 1 180 0 248 299 179 0 chr10 75034709 75034826 -70554462 + L2 LINE L2 2913 3050 -222 3434 145 22 73 chr10 75034918 75035047 -70554241 - L1MB7 LINE L1 -9 6175 6041 1701 150 0 11 chr10 75035047 75035307 -70553981 + AluJo SINE Alu 1 257 -55 3434 145 22 73 chr10 75035307 75035781 -70553507 - L1MB7 LINE L1 -143 6041 5544 192 77 0 0 chr10 75035781 75035807 -70553481 + (TA)n Simple_repeat Simple_repeat 2 27 0 1611 210 0 17 chr10 75035807 75035963 -70553325 - AluJo SINE Alu -13 299 149 2122 111 10 3 chr10 75035963 75036251 -70553037 - AluSx SINE Alu -22 290 1 1611 210 0 17 chr10 75036251 75036394 -70552894 - AluJo SINE Alu -163 149 5 3434 145 22 73 chr10 75036394 75036526 -70552762 - L1MB7 LINE L1 -638 5546 5476 1962 162 3 3 chr10 75036553 75036856 -70552432 - AluJb SINE Alu -5 307 5 680 240 20 0 chr10 75037197 75037343 -70551945 + MER5A DNA MER1_type 39 187 -2 597 295 82 19 chr10 75037460 75037826 -70551462 + L1ME4a LINE L1 5517 5905 -216 2474 50 0 0 chr10 75037840 75038163 -70551125 - AluY SINE Alu 0 323 1 3279 26 0 3 chr10 75038179 75038559 -70550729 - L1PA4 LINE L1 0 6155 5777 1809 102 121 11 chr10 75038559 75038824 -70550464 - AluSg SINE Alu -16 294 1 303 237 0 0 chr10 75038877 75038936 -70550352 + MER82 DNA MER2_type 1 59 -594 1826 165 7 13 chr10 75039063 75039372 -70549916 + AluJb SINE Alu 1 307 -5 2331 102 0 3 chr10 75039373 75039667 -70549621 + AluSx SINE Alu 2 294 -18 342 284 119 9 chr10 75040100 75040209 -70549079 - MIR SINE MIR -55 153 33 2193 114 0 3 chr10 75040361 75040651 -70548637 + AluSx SINE Alu 1 289 -23 30 0 0 0 chr10 75040651 75040681 -70548607 + AT_rich Low_complexity Low_complexity 1 30 0 232 298 125 19 chr10 75040966 75041070 -70548218 - L2 LINE L2 -19 3253 3139 282 313 27 27 chr10 75041291 75041403 -70547885 - MIR3 SINE MIR -16 192 81 278 336 35 0 chr10 75041561 75041674 -70547614 + MIR SINE MIR 146 262 0 2103 121 7 3 chr10 75041823 75042113 -70547175 + AluSx SINE Alu 1 291 -21 22 0 0 0 chr10 75042293 75042315 -70546973 + AT_rich Low_complexity Low_complexity 1 22 0 959 202 14 23 chr10 75042582 75042800 -70546488 - MER58A DNA MER1_type 0 224 9 439 220 220 26 chr10 75042811 75043084 -70546204 - L1MC4a LINE L1 -1915 5893 5568 182 200 0 0 chr10 75043675 75043710 -70545578 - MIR SINE MIR -127 135 101 295 289 37 89 chr10 75043746 75043881 -70545407 + MIR SINE MIR 5 132 -130 1863 153 0 54 chr10 75043898 75044212 -70545076 + AluJo SINE Alu 1 297 -15 598 274 124 23 chr10 75044270 75044606 -70544682 + MLT1I LTR MaLR 34 404 -5 336 238 24 24 chr10 75044607 75044691 -70544597 + L2 LINE L2 3173 3256 -16 392 94 47 0 chr10 75044817 75044881 -70544407 + MLT1B LTR MaLR 15 81 -309 2263 101 3 7 chr10 75044889 75045187 -70544101 - AluSq SINE Alu -16 297 1 2261 204 14 40 chr10 75045208 75045625 -70543663 - L1PA15-16 LINE L1 -4289 2560 2159 2454 88 0 3 chr10 75045625 75045932 -70543356 - AluSc SINE Alu -3 306 1 2261 204 14 40 chr10 75045932 75046068 -70543220 - L1PA15-16 LINE L1 -4690 2159 2021 1858 90 0 8 chr10 75046073 75046328 -70542960 - L1PB1 LINE L1 -2 6149 5897 351 89 0 18 chr10 75046430 75046486 -70542802 + MLT1C LTR MaLR 64 118 -349 2180 110 0 0 chr10 75046486 75046777 -70542511 + AluSx SINE Alu 15 305 -7 863 178 27 139 chr10 75046787 75047118 -70542170 + MLT1C LTR MaLR 97 467 0 2420 105 0 0 chr10 75047426 75047732 -70541556 + AluSx SINE Alu 1 306 -6 1336 185 106 4 chr10 75047746 75048011 -70541277 + AluJb SINE Alu 5 296 -16 2753 235 211 12 chr10 75048024 75048960 -70540328 + L1MD2 LINE L1 21 1142 -5267 2280 110 3 0 chr10 75048961 75049262 -70540026 + AluSp SINE Alu 1 302 -11 604 177 143 86 chr10 75049267 75049446 -70539842 + L1MD2 LINE L1 1240 1340 -4964 2102 135 3 3 chr10 75049446 75049743 -70539545 + AluSx SINE Alu 1 297 -15 604 177 143 86 chr10 75049743 75049856 -70539432 + L1MD2 LINE L1 1340 1445 -4859 1865 221 79 27 chr10 75050250 75050880 -70538408 + L1MD2 LINE L1 2452 3114 -3292 4605 175 64 53 chr10 75050889 75051770 -70537518 + L1MD2 LINE L1 4828 5698 -921 1977 127 38 10 chr10 75051770 75052061 -70537227 + AluJb SINE Alu 1 299 -13 4605 175 64 53 chr10 75052061 75052948 -70536340 + L1MD2 LINE L1 5698 6619 0 2125 122 10 0 chr10 75052956 75053252 -70536036 + AluSx SINE Alu 1 299 -13 269 320 21 0 chr10 75053282 75053379 -70535909 - MIR SINE MIR -112 150 52 1935 139 0 23 chr10 75054292 75054595 -70534693 - AluJb SINE Alu -16 296 1 1244 162 0 178 chr10 75054945 75055304 -70533984 + AluJb SINE Alu 1 295 -17 2255 127 53 13 chr10 75055305 75055698 -70533590 + L1MA7 LINE L1 5883 6291 0 21 0 0 0 chr10 75055805 75055826 -70533462 + AT_rich Low_complexity Low_complexity 1 21 0 2151 96 25 0 chr10 75056000 75056281 -70533007 + AluSg1 SINE Alu 9 296 -13 24 32 0 0 chr10 75056605 75056636 -70532652 + AT_rich Low_complexity Low_complexity 1 31 0 2286 92 0 0 chr10 75057453 75057734 -70531554 + AluSc SINE Alu 1 281 -28 827 209 5 21 chr10 75057750 75057937 -70531351 + AluJo SINE Alu 104 287 -25 208 269 0 15 chr10 75058080 75058147 -70531141 + A-rich Low_complexity Low_complexity 4 69 0 219 69 0 0 chr10 75058814 75058843 -70530445 + (GGGGA)n Simple_repeat Simple_repeat 4 32 0 591 205 98 141 chr10 75058965 75059322 -70529966 + L1ME4a LINE L1 5492 5828 -293 1461 189 57 11 chr10 75059322 75059602 -70529686 + AluJo SINE Alu 1 293 -19 591 205 98 141 chr10 75059602 75059692 -70529596 + L1ME4a LINE L1 5828 5920 -201 2231 102 10 3 chr10 75059848 75060152 -70529136 + AluSq SINE Alu 1 306 -7 1658 160 46 11 chr10 75060273 75060555 -70528733 - AluJb SINE Alu -8 304 13 2112 141 0 3 chr10 75060733 75061032 -70528256 - AluJb SINE Alu -14 298 1 1854 144 18 0 chr10 75062023 75062300 -70526988 - AluJb SINE Alu -15 297 16 2477 57 10 3 chr10 75062706 75063003 -70526285 - AluY SINE Alu -12 299 1 1232 184 136 29 chr10 75063218 75063534 -70525754 - MER21B LTR ERV1 -105 758 409 2043 161 67 5 chr10 75063900 75064272 -70525016 - L1MC3 LINE L1 -469 7316 6922 2150 125 143 62 chr10 75064273 75064754 -70524534 + L1MB7 LINE L1 5634 6153 -31 1773 161 53 11 chr10 75064775 75065130 -70524158 + L1MB7 LINE L1 5814 6183 -1 297 304 18 27 chr10 75066099 75066211 -70523077 - L3 LINE CR1 -187 1390 1280 2199 116 0 0 chr10 75066853 75067183 -70522105 + AluSx SINE Alu 1 330 0 915 144 8 0 chr10 75067197 75067329 -70521959 - FLAM_C SINE Alu 0 133 1 2164 98 0 20 chr10 75067411 75067708 -70521580 - AluSx SINE Alu -6 306 16 427 167 0 0 chr10 75067808 75067874 -70521414 - AluJ/FLAM SINE Alu -245 67 2 2141 122 0 3 chr10 75068300 75068596 -70520692 + AluSg SINE Alu 1 295 -15 2043 76 43 36 chr10 75068981 75069283 -70520005 + AluY SINE Alu 1 304 -7 232 266 25 25 chr10 75069513 75069592 -70519696 - MIR SINE MIR -180 82 4 885 151 0 0 chr10 75071170 75071296 -70517992 - FLAM_C SINE Alu -17 126 1 257 245 179 28 chr10 75071470 75071576 -70517712 + MARNA DNA Mariner 126 247 -339 2115 100 0 7 chr10 75072054 75072323 -70516965 - AluSx SINE Alu -45 267 1 1040 191 0 0 chr10 75072347 75072515 -70516773 - AluJb SINE Alu -13 299 132 276 149 0 0 chr10 75072515 75072562 -70516726 + (TG)n Simple_repeat Simple_repeat 1 47 0 708 74 66 4 chr10 75072563 75072806 -70516482 + (TA)n Simple_repeat Simple_repeat 1 258 0 380 250 0 0 chr10 75072915 75072987 -70516301 - AluY SINE Alu -107 194 123 263 202 39 0 chr10 75072990 75073094 -70516194 + (TA)n Simple_repeat Simple_repeat 1 108 0 748 51 58 31 chr10 75073107 75073634 -70515654 + (TA)n Simple_repeat Simple_repeat 1 722 0 246 176 0 20 chr10 75073639 75073690 -70515598 - AluY SINE Alu -169 133 84 2438 77 0 6 chr10 75074610 75074921 -70514367 + AluY SINE Alu 1 309 -2 337 202 42 92 chr10 75074968 75075087 -70514201 - L2 LINE L2 0 3313 3201 288 56 0 0 chr10 75075118 75075154 -70514134 + tRNA-Gly-GGC tRNA tRNA 1 36 -38 2901 29 3 20 chr10 75075234 75075584 -70513704 - L1PA4 LINE L1 -1 6154 5811 788 163 0 0 chr10 75075641 75075764 -70513524 + AluJo/FLAM SINE Alu 2 124 -178 207 0 0 0 chr10 75075775 75075798 -70513490 + (GA)n Simple_repeat Simple_repeat 2 24 0 1573 188 0 17 chr10 75075798 75076081 -70513207 - AluJo SINE Alu -32 280 1 889 150 0 0 chr10 75076690 75076823 -70512465 + FLAM_C SINE Alu 1 133 0 21 0 0 0 chr10 75076958 75076979 -70512309 + AT_rich Low_complexity Low_complexity 1 21 0 2516 90 0 0 chr10 75077280 75077592 -70511696 - AluSp SINE Alu 0 313 2 1487 180 36 22 chr10 75077776 75078077 -70511211 - AluSx SINE Alu 0 305 1 1564 158 91 7 chr10 75078855 75079140 -70510148 + AluJo SINE Alu 1 309 -3 2035 159 0 3 chr10 75079930 75080238 -70509050 + AluJb SINE Alu 1 307 -5 597 162 45 0 chr10 75081855 75081966 -70507322 - FLAM_A SINE Alu -4 138 23 2115 121 3 0 chr10 75082481 75082771 -70506517 - AluJb SINE Alu -21 291 1 1565 185 0 30 chr10 75083028 75083330 -70505958 - AluJb SINE Alu -18 294 2 2339 111 0 0 chr10 75083847 75084154 -70505134 + AluSx SINE Alu 1 307 -5 253 116 23 0 chr10 75085309 75085352 -70503936 + MIR3 SINE MIR 113 156 -52 371 250 52 9 chr10 75086485 75086601 -70502687 + MIR SINE MIR 105 225 -37 22 0 0 0 chr10 75086660 75086682 -70502606 + GC_rich Low_complexity Low_complexity 1 22 0 26 0 0 0 chr10 75086992 75087018 -70502270 + AT_rich Low_complexity Low_complexity 1 26 0 2163 113 3 0 chr10 75087345 75087636 -70501652 + AluSx SINE Alu 1 292 -20 278 275 12 12 chr10 75087999 75088079 -70501209 + L2 LINE L2 3189 3268 -4 2224 138 0 0 chr10 75088280 75088591 -70500697 - AluSx SINE Alu -1 311 1 2403 77 0 3 chr10 75088623 75088923 -70500365 - AluSg SINE Alu -11 299 1 219 363 133 19 chr10 75089121 75089377 -70499911 - L2 LINE L2 -12 3260 2976 2328 82 7 10 chr10 75089413 75089719 -70499569 + AluSg SINE Alu 1 305 -5 547 354 61 23 chr10 75089721 75090150 -70499138 - L2 LINE L2 -471 2843 2399 340 219 14 0 chr10 75090175 75090248 -70499040 + MLT1L LTR MaLR 6 79 -536 2241 121 0 10 chr10 75090249 75090562 -70498726 + AluSq SINE Alu 1 310 -3 6139 106 53 37 chr10 75090632 75093424 -70495864 - SVA Other Other -518 1386 22 222 37 0 0 chr10 75093424 75093451 -70495837 + (AGGGGG)n Simple_repeat Simple_repeat 4 30 0 6139 106 53 37 chr10 75093451 75093470 -70495818 - SVA Other Other -1882 22 5 328 311 0 50 chr10 75093770 75093950 -70495338 + G-rich Low_complexity Low_complexity 4 174 0 228 368 7 7 chr10 75094499 75094635 -70494653 + GA-rich Low_complexity Low_complexity 2 137 0 2327 77 3 3 chr10 75094638 75094924 -70494364 - AluSc SINE Alu -23 286 1 243 271 150 15 chr10 75094927 75095060 -70494228 + MLT1L LTR MaLR 132 282 -333 377 197 0 0 chr10 75095082 75095153 -70494135 + MLT1I LTR MaLR 339 409 0 618 258 39 65 chr10 75095191 75095283 -70494005 + MLT1L LTR MaLR 383 476 -139 2478 64 0 32 chr10 75095283 75095594 -70493694 + AluY SINE Alu 1 301 -10 618 258 39 65 chr10 75095594 75095730 -70493558 + MLT1L LTR MaLR 476 605 -10 402 117 0 0 chr10 75095747 75095807 -70493481 + L1MB3 LINE L1 5808 5867 -316 811 122 0 0 chr10 75095811 75095918 -70493370 - AluSq/x SINE Alu -205 107 1 1052 192 0 5 chr10 75096150 75096348 -70492940 + L1MB3 LINE L1 5866 6062 -121 2221 98 7 3 chr10 75096348 75096635 -70492653 + AluSx SINE Alu 1 288 -24 260 111 22 0 chr10 75096635 75096680 -70492608 + GA-rich Low_complexity Low_complexity 1 46 0 573 112 71 0 chr10 75096682 75096780 -70492508 + L1MB3 LINE L1 6043 6147 -36 650 231 114 46 chr10 75096871 75097238 -70492050 - LTR33A LTR ERVL 0 523 84 668 304 61 20 chr10 75097259 75097506 -70491782 - MLT1I LTR MaLR -23 386 130 1106 194 42 0 chr10 75097876 75098067 -70491221 - AluJb SINE Alu -10 302 104 1056 250 107 60 chr10 75099210 75099797 -70489491 + MLT1L LTR MaLR 1 615 0 831 253 73 70 chr10 75099939 75100338 -70488950 + MLT1K LTR MaLR 173 572 -16 209 333 13 13 chr10 75100950 75101028 -70488260 + MIR SINE MIR 71 148 -114 470 340 7 13 chr10 75101975 75102128 -70487160 + MIR SINE MIR 13 164 -98 614 277 57 0 chr10 75102138 75102279 -70487009 - L2 LINE L2 -1 3271 3123 2379 115 0 0 chr10 75102311 75102623 -70486665 - AluSx SINE Alu 0 312 1 556 297 47 10 chr10 75102732 75102924 -70486364 + L2 LINE L2 2918 3116 -197 647 83 12 0 chr10 75102958 75103042 -70486246 + AluS SINE Alu 5 89 -223 2080 151 0 0 chr10 75103207 75103505 -70485783 - AluJb SINE Alu -14 298 1 743 191 27 53 chr10 75103611 75103799 -70485489 + MER5A DNA MER1_type 7 189 0 439 304 14 40 chr10 75103812 75103960 -70485328 + MER5A DNA MER1_type 7 150 -39 1936 156 0 31 chr10 75104298 75104618 -70484670 + AluJo SINE Alu 1 310 -2 2256 120 0 13 chr10 75105544 75105860 -70483428 + AluSx SINE Alu 1 312 0 2958 193 36 12 chr10 75106033 75106638 -70482650 - LTR26E LTR ERV1 0 622 3 296 235 61 87 chr10 75106661 75106776 -70482512 - L2 LINE L2 -1 3312 3201 917 239 81 5 chr10 75106796 75107018 -70482270 - MIR SINE MIR -16 246 8 619 250 22 0 chr10 75107290 75107426 -70481862 + MER5B DNA MER1_type 1 139 -39 2231 198 41 99 chr10 75107428 75107753 -70481535 - LTR8 LTR ERV1 0 691 349 1995 104 119 33 chr10 75107753 75108088 -70481200 + THE1B LTR MaLR 1 364 0 2231 198 41 99 chr10 75108088 75108496 -70480792 - LTR8 LTR ERV1 -342 349 1 212 158 53 0 chr10 75108497 75108535 -70480753 + MER5B DNA MER1_type 139 178 0 298 281 105 9 chr10 75109219 75109333 -70479955 - MIR SINE MIR -67 141 17 2460 84 23 0 chr10 75110455 75110754 -70478534 + AluSx SINE Alu 1 306 -6 317 245 66 10 chr10 75110761 75110863 -70478425 + L1ME3 LINE L1 5730 5822 -299 215 264 167 0 chr10 75111326 75111398 -70477890 - L2 LINE L2 0 3313 3230 293 282 0 0 chr10 75111621 75111692 -70477596 + MIR SINE MIR 80 150 -112 260 245 154 49 chr10 75112528 75112671 -70476617 + MIR SINE MIR 14 171 -91 264 320 0 30 chr10 75113607 75113707 -70475581 + MIR SINE MIR 39 135 -73 340 232 188 29 chr10 75114139 75114277 -70475011 - MIR SINE MIR -91 171 12 204 182 136 82 chr10 75114370 75114480 -70474808 + L3 LINE CR1 1269 1384 -193 2149 246 136 63 chr10 75114836 75115848 -70473440 + L1MC4 LINE L1 6790 7727 -315 237 33 0 0 chr10 75115848 75115878 -70473410 + (GA)n Simple_repeat Simple_repeat 1 30 0 2149 246 136 63 chr10 75115878 75115936 -70473352 + L1MC4 LINE L1 7727 7779 -263 2575 50 0 3 chr10 75115936 75116233 -70473055 + AluY SINE Alu 1 296 -15 2149 246 136 63 chr10 75116233 75116329 -70472959 + L1MC4 LINE L1 7779 8042 0 535 175 157 42 chr10 75116437 75116603 -70472685 + L1ME3 LINE L1 5903 6087 -75 2306 153 74 43 chr10 75116607 75116765 -70472523 + L1MB2 LINE L1 5643 5795 -376 2257 117 3 0 chr10 75116765 75117073 -70472215 - AluSq SINE Alu -3 310 2 2306 153 74 43 chr10 75117073 75117425 -70471863 + L1MB2 LINE L1 5795 6169 -2 21 0 0 0 chr10 75117425 75117446 -70471842 + AT_rich Low_complexity Low_complexity 1 21 0 333 0 0 0 chr10 75117469 75117506 -70471782 + (TA)n Simple_repeat Simple_repeat 1 37 0 944 141 6 68 chr10 75117946 75118123 -70471165 - L1MB5 LINE L1 -6 6168 6003 364 132 132 0 chr10 75118811 75118887 -70470401 - L1MB8 LINE L1 0 6178 6093 272 93 37 0 chr10 75118893 75118947 -70470341 - L1MB3 LINE L1 -1 6182 6127 2238 86 0 3 chr10 75118967 75119258 -70470030 + AluY SINE Alu 1 290 -21 1973 137 24 0 chr10 75119422 75119714 -70469574 + AluSx SINE Alu 12 310 -2 280 254 108 39 chr10 75119746 75119876 -70469412 + L1MC4a LINE L1 5715 5853 -1955 249 276 173 19 chr10 75120024 75120180 -70469108 + L1MC4a LINE L1 5988 6167 -1641 256 333 0 0 chr10 75120259 75120337 -70468951 + (TG)n Simple_repeat Simple_repeat 2 79 0 418 280 23 69 chr10 75120786 75120961 -70468327 - L3 LINE CR1 -98 1479 1313 626 284 40 25 chr10 75121025 75121226 -70468062 + MIR SINE MIR 56 259 -3 1146 250 100 30 chr10 75121981 75122421 -70466867 + LTR33 LTR ERVL 40 510 -11 195 286 0 39 chr10 75122655 75122732 -70466556 - MIR SINE MIR -51 211 138 208 243 220 20 chr10 75122741 75122858 -70466430 - MIR SINE MIR -62 200 62 745 214 67 75 chr10 75123401 75123746 -70465542 - L1MC5 LINE L1 -71 7890 7549 1029 240 125 55 chr10 75123749 75124261 -70465027 - MLT1H LTR MaLR 0 549 2 617 275 13 25 chr10 75124263 75124499 -70464789 - L1MC5 LINE L1 -412 7549 7317 1415 155 0 0 chr10 75124564 75124771 -70464517 - AluJo SINE Alu -100 212 6 1974 105 4 4 chr10 75124834 75125092 -70464196 - AluSx SINE Alu -16 296 39 456 296 21 26 chr10 75125094 75125283 -70464005 + L2 LINE L2 2754 2941 -373 366 250 43 101 chr10 75125314 75125522 -70463766 + L2 LINE L2 3118 3313 0 813 196 16 42 chr10 75126235 75126424 -70462864 + MER5A DNA MER1_type 4 187 -2 2082 161 0 0 chr10 75126550 75126860 -70462428 + AluJb SINE Alu 1 310 -2 358 294 49 14 chr10 75126884 75127027 -70462261 + MIR SINE MIR 71 218 -44 2313 122 0 0 chr10 75127154 75127466 -70461822 + AluSx SINE Alu 1 312 0 676 87 16 24 chr10 75127469 75127595 -70461693 + (GAAA)n Simple_repeat Simple_repeat 4 128 0 299 242 147 11 chr10 75128416 75128511 -70460777 + MER5B DNA MER1_type 1 108 -70 2252 109 0 3 chr10 75129483 75129776 -70459512 + AluSg SINE Alu 1 292 -18 311 281 0 0 chr10 75131031 75131113 -70458175 - L1M4 LINE L1 -3123 3023 2942 203 283 100 58 chr10 75131165 75131285 -70458003 - MIR SINE MIR -112 150 26 2167 117 3 0 chr10 75131892 75132182 -70457106 - AluSx SINE Alu -1 311 21 219 182 73 0 chr10 75132643 75132698 -70456590 + MIR SINE MIR 94 152 -56 186 73 73 0 chr10 75133052 75133093 -70456195 + (CTGGGG)n Simple_repeat Simple_repeat 1 44 0 437 287 49 0 chr10 75133401 75133523 -70455765 - L3 LINE CR1 -176 1401 1274 670 319 213 9 chr10 75133653 75134104 -70455184 - L3 LINE CR1 -693 884 342 22 35 0 0 chr10 75134243 75134272 -70455016 + AT_rich Low_complexity Low_complexity 1 29 0 4799 160 21 54 chr10 75134282 75134472 -70454816 - L1MA7 LINE L1 0 6291 6096 2064 126 18 0 chr10 75134472 75134758 -70454530 - AluSx SINE Alu -17 295 5 2084 137 0 3 chr10 75134768 75135076 -70454212 - AluSx SINE Alu 0 307 1 4799 160 21 54 chr10 75135076 75135927 -70453361 - L1MA7 LINE L1 -204 6087 5273 2202 110 0 0 chr10 75136037 75136341 -70452947 + AluSg SINE Alu 1 304 0 660 264 24 51 chr10 75136612 75136866 -70452422 + LTR16C LTR ERVL 243 489 -2 456 291 43 35 chr10 75136924 75137178 -70452110 - L1ME4a LINE L1 -181 5940 5685 385 300 127 55 chr10 75137228 75137465 -70451823 - L3 LINE CR1 -1277 300 47 358 279 7 29 chr10 75137956 75138092 -70451196 - MIR SINE MIR -67 195 63 189 0 0 0 chr10 75138448 75138469 -70450819 + (TG)n Simple_repeat Simple_repeat 2 22 0 270 56 0 0 chr10 75138519 75138555 -70450733 + (TC)n Simple_repeat Simple_repeat 1 36 0 295 76 0 61 chr10 75138610 75138676 -70450612 + (TCTCTG)n Simple_repeat Simple_repeat 2 63 0 225 152 43 0 chr10 75138719 75138765 -70450523 + (TCTG)n Simple_repeat Simple_repeat 2 49 0 201 74 0 0 chr10 75138765 75138792 -70450496 + (CA)n Simple_repeat Simple_repeat 1 27 0 228 229 288 46 chr10 75139677 75139830 -70449458 + MIR SINE MIR 61 250 -12 190 217 0 43 chr10 75139800 75139846 -70449442 + L2 LINE L2 3266 3309 -4 * 4424 62 28 13 chr10 75139931 75140531 -70448757 + L1MA1 LINE L1 5682 6290 -12 220 304 81 34 chr10 75140708 75140856 -70448432 - L3 LINE CR1 -10 1567 1413 665 224 20 33 chr10 75140939 75141091 -70448197 + MIR SINE MIR 109 258 -4 714 181 137 22 chr10 75141236 75141418 -70447870 + MIR SINE MIR 60 262 0 2258 108 7 7 chr10 75141433 75141739 -70447549 - AluSx SINE Alu -6 306 1 530 217 35 55 chr10 75142000 75142088 -70447200 + MIR SINE MIR 22 110 -129 2646 113 3 3 chr10 75142088 75142452 -70446836 + THE1B LTR MaLR 1 364 0 530 217 35 55 chr10 75142452 75142542 -70446746 + MIR SINE MIR 110 200 -39 1444 190 48 27 chr10 75142646 75142808 -70446480 + MLT1B LTR MaLR 1 158 -232 1901 161 0 43 chr10 75142808 75143132 -70446156 + AluJb SINE Alu 1 310 -2 1444 190 48 27 chr10 75143132 75143306 -70445982 + MLT1B LTR MaLR 158 344 -46 1821 103 57 7 chr10 75143333 75143630 -70445658 + MER1B DNA MER1_type 8 331 -8 321 51 0 0 chr10 75143634 75143673 -70445615 + MLT1B LTR MaLR 348 386 -4 260 267 124 57 chr10 75143834 75143939 -70445349 - MIR SINE MIR -61 147 36 269 234 15 124 chr10 75144448 75144464 -70444824 - Charlie8 DNA MER1_type -194 147 131 2209 117 0 0 chr10 75144464 75144768 -70444520 - AluSx SINE Alu 0 304 1 269 234 15 124 chr10 75144768 75144887 -70444401 - Charlie8 DNA MER1_type -210 131 26 497 162 9 213 chr10 75144929 75145145 -70444143 - MER5B DNA MER1_type -6 172 1 246 62 0 0 chr10 75145219 75145251 -70444037 + (TGAA)n Simple_repeat Simple_repeat 4 35 0 207 210 210 10 chr10 75145430 75145530 -70443758 + L2 LINE L2 2843 2962 -351 441 183 149 10 chr10 75145617 75145747 -70443541 + MER5B DNA MER1_type 1 128 -50 269 128 0 0 chr10 75145755 75145794 -70443494 + Alu SINE Alu 248 286 -16 1786 130 0 8 chr10 75145798 75146044 -70443244 - AluSx SINE Alu -68 244 1 320 215 31 0 chr10 75146044 75146109 -70443179 + MER5B DNA MER1_type 112 178 0 996 204 45 88 chr10 75146172 75146201 -70443087 - MLT1A2 LTR MaLR -34 340 311 2106 98 3 47 chr10 75146201 75146498 -70442790 - AluY SINE Alu -14 297 14 996 204 45 88 chr10 75146498 75146820 -70442468 - MLT1A2 LTR MaLR -63 311 4 255 330 31 21 chr10 75147626 75147723 -70441565 + MIR SINE MIR 18 115 -93 1830 163 21 3 chr10 75148154 75148443 -70440845 + AluJo SINE Alu 1 294 -18 446 292 58 0 chr10 75148497 75148651 -70440637 + MIR SINE MIR 76 238 -24 492 228 44 15 chr10 75148892 75149028 -70440260 + LTR37B LTR ERV1 119 258 -210 458 199 163 92 chr10 75149038 75149112 -70440176 - MER5A DNA MER1_type -30 159 92 2476 90 3 0 chr10 75149112 75149422 -70439866 - AluSq SINE Alu -2 311 1 458 199 163 92 chr10 75149422 75149488 -70439800 - MER5A DNA MER1_type -97 92 9 1015 300 104 17 chr10 75149908 75150502 -70438786 - L2 LINE L2 0 3313 2667 237 311 78 0 chr10 75150502 75150605 -70438683 - MER5B DNA MER1_type -37 141 31 246 181 28 97 chr10 75151207 75151279 -70438009 - MIR SINE MIR -89 173 107 2244 119 3 3 chr10 75151515 75151825 -70437463 + AluSx SINE Alu 1 310 -2 1196 179 102 81 chr10 75152247 75152700 -70436588 + MER110A LTR ERV1 23 477 -14 425 281 26 0 chr10 75152852 75152966 -70436322 - MIR3 SINE MIR -18 190 74 366 227 34 0 chr10 75152963 75153051 -70436237 + MIR SINE MIR 167 257 -5 * 2342 113 3 0 chr10 75153065 75153375 -70435913 + AluSx SINE Alu 1 311 -1 2108 111 14 0 chr10 75153381 75153685 -70435603 + AluSq SINE Alu 1 308 0 859 208 45 0 chr10 75153784 75153962 -70435326 - MER5A DNA MER1_type 0 189 4 652 178 130 11 chr10 75154737 75154898 -70434390 - MER5A DNA MER1_type -3 186 4 405 254 24 48 chr10 75154908 75155034 -70434254 - MER91A DNA MER1_type -17 179 57 417 174 228 0 chr10 75155563 75155655 -70433633 - MER81 DNA DNA 0 114 2 2355 156 42 77 chr10 75157051 75157347 -70431941 + L1MB4 LINE L1 5589 5857 -323 2210 107 0 7 chr10 75157347 75157645 -70431643 + AluSg1 SINE Alu 1 296 -13 2355 156 42 77 chr10 75157645 75157920 -70431368 + L1MB4 LINE L1 5857 6140 -40 1129 160 0 0 chr10 75158199 75158368 -70430920 - AluJo SINE Alu -143 169 1 200 57 0 29 chr10 75158386 75158421 -70430867 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2140 65 4 4 chr10 75158625 75158887 -70430401 + AluY SINE Alu 1 262 -49 24 32 0 0 chr10 75158924 75158955 -70430333 + AT_rich Low_complexity Low_complexity 1 31 0 1671 158 0 40 chr10 75159000 75159298 -70429990 - AluJo SINE Alu -2 310 25 2582 170 28 147 chr10 75159309 75160264 -70429024 - L1MC4a LINE L1 -1092 6716 5875 874 168 8 0 chr10 75160267 75160428 -70428860 + AluJb SINE Alu 151 312 0 587 221 8 8 chr10 75160428 75160550 -70428738 - MER5B DNA MER1_type -56 122 1 1159 185 56 35 chr10 75160660 75160757 -70428531 - MER8 DNA MER2_type -2 237 144 2385 110 32 24 chr10 75160757 75161129 -70428159 - THE1C LTR MaLR 0 375 1 1159 185 56 35 chr10 75161129 75161263 -70428025 - MER8 DNA MER2_type -95 144 1 218 319 167 22 chr10 75161268 75161406 -70427882 + L3 LINE CR1 1392 1549 -28 449 281 84 6 chr10 75162275 75162433 -70426855 + MIR SINE MIR 65 234 -28 297 271 35 55 chr10 75162602 75162741 -70426547 + MIR SINE MIR 36 176 -58 182 261 31 15 chr10 75162727 75162792 -70426496 + L2 LINE L2 2994 3059 -213 * 1939 105 11 25 chr10 75162877 75163162 -70426126 - AluSx SINE Alu 0 312 32 332 331 86 23 chr10 75163322 75163497 -70425791 + MIR3 SINE MIR 5 190 -18 502 260 75 20 chr10 75163550 75163696 -70425592 - MIR SINE MIR -16 246 93 189 246 105 18 chr10 75163728 75163785 -70425503 - L2 LINE L2 -61 3211 3150 230 305 0 152 chr10 75163836 75163880 -70425408 + MER5B DNA MER1_type 1 50 -128 1710 162 20 43 chr10 75163880 75163976 -70425312 - AluJb SINE Alu -16 296 199 3514 209 20 81 chr10 75163976 75165007 -70424281 - LTR5 LTR ERVK 0 969 1 1710 162 20 43 chr10 75165007 75165213 -70424075 - AluJb SINE Alu -113 199 1 230 305 0 152 chr10 75165213 75165378 -70423910 + MER5B DNA MER1_type 50 178 0 * 372 288 98 13 chr10 75165378 75165520 -70423768 + MIR SINE MIR 16 170 -92 1740 147 3 29 chr10 75165826 75166133 -70423155 + AluJb SINE Alu 11 309 -3 26 0 0 0 chr10 75166682 75166708 -70422580 + GC_rich Low_complexity Low_complexity 1 26 0 378 302 139 12 chr10 75167576 75167748 -70421540 - MIR SINE MIR -54 208 15 215 246 170 37 chr10 75168783 75168918 -70420370 - MIR SINE MIR -70 192 38 2648 141 29 2 chr10 75169761 75170215 -70419073 - L1MB3 LINE L1 -10 6173 5708 258 270 36 0 chr10 75171267 75171378 -70417910 - L1ME4a LINE L1 0 6121 6007 2841 223 103 12 chr10 75171436 75172101 -70417187 - L1ME1 LINE L1 -5 6161 5415 2313 120 7 0 chr10 75172101 75172410 -70416878 + AluSx SINE Alu 1 311 -1 2841 223 103 12 chr10 75172410 75172510 -70416778 - L1ME1 LINE L1 -751 5415 5326 2209 113 0 0 chr10 75172529 75172834 -70416454 + AluSx SINE Alu 1 305 0 725 161 0 0 chr10 75172899 75173011 -70416277 - AluSp/q SINE Alu -17 296 185 2237 135 3 0 chr10 75173119 75173430 -70415858 - AluJb SINE Alu 0 312 1 183 80 0 0 chr10 75173497 75173522 -70415766 + (A)n Simple_repeat Simple_repeat 1 25 0 637 235 73 40 chr10 75174554 75174620 -70414668 + MER112 DNA MER1_type 2 64 -192 468 0 0 0 chr10 75174620 75174672 -70414616 + (TAGA)n Simple_repeat Simple_repeat 2 53 0 637 235 73 40 chr10 75174672 75174852 -70414436 + MER112 DNA MER1_type 64 256 0 223 225 53 133 chr10 75176500 75176651 -70412637 - MIR3 SINE MIR -62 146 8 198 301 12 60 chr10 75177145 75177228 -70412060 - L3 LINE CR1 -30 1547 1469 467 284 117 83 chr10 75177240 75178251 -70411037 - L1 LINE L1 -2737 3409 2350 1916 135 0 4 chr10 75178840 75179106 -70410182 + AluSx SINE Alu 9 273 -39 307 288 55 34 chr10 75179289 75179435 -70409853 - L2 LINE L2 -1 3312 3164 2459 240 76 28 chr10 75179519 75179749 -70409539 - L1M4 LINE L1 -1985 4161 3943 2270 99 3 13 chr10 75179749 75180062 -70409226 - AluSx SINE Alu -2 310 1 2459 240 76 28 chr10 75180062 75180607 -70408681 - L1M4 LINE L1 -2203 3943 3349 263 329 81 12 chr10 75181137 75181298 -70407990 + MIR3 SINE MIR 21 192 -16 297 315 89 7 chr10 75181400 75181546 -70407742 - MIR SINE MIR -1 261 104 1951 148 7 3 chr10 75182559 75182849 -70406439 + AluJb SINE Alu 1 291 -21 189 214 36 0 chr10 75182866 75182922 -70406366 + MIR SINE MIR 74 131 -131 2209 123 0 0 chr10 75184065 75184366 -70404922 + AluSx SINE Alu 1 301 -11 183 321 71 12 chr10 75186022 75186106 -70403182 + L2 LINE L2 2972 3060 -212 2916 166 60 4 chr10 75186472 75187001 -70402287 + MER89 LTR ERV1 1 559 0 996 177 1 127 chr10 75188639 75188833 -70400455 - L1MD3 LINE L1 -369 5809 5701 2263 100 0 0 chr10 75188833 75189157 -70400131 - AluSx SINE Alu 0 325 2 996 177 1 127 chr10 75189157 75189283 -70400005 - L1MD3 LINE L1 -477 5701 5561 2289 122 3 0 chr10 75190036 75190340 -70398948 + AluSx SINE Alu 1 305 -7 2484 170 58 79 chr10 75191398 75191682 -70397606 + L1MB8 LINE L1 5561 5849 -329 2018 139 0 35 chr10 75191682 75191992 -70397296 + AluSx SINE Alu 1 299 -13 2484 170 58 79 chr10 75191992 75192213 -70397075 + L1MB8 LINE L1 5849 6053 -125 2123 112 7 36 chr10 75192213 75192518 -70396770 + AluSx SINE Alu 1 296 -16 2484 170 58 79 chr10 75192518 75192633 -70396655 + L1MB8 LINE L1 6053 6169 -9 24 53 0 0 chr10 75192634 75192672 -70396616 + AT_rich Low_complexity Low_complexity 1 38 0 389 258 73 46 chr10 75192740 75192891 -70396397 + MIR SINE MIR 99 253 -9 200 244 0 0 chr10 75193096 75193141 -70396147 + L2 LINE L2 2894 2938 -334 310 274 151 0 chr10 75193151 75193257 -70396031 + L1M4 LINE L1 4302 4423 -1723 359 294 25 62 chr10 75193298 75193458 -70395830 + L2 LINE L2 3007 3160 -112 703 321 128 59 chr10 75194010 75194113 -70395175 + L1M4 LINE L1 4027 4121 -2025 1774 163 22 26 chr10 75194113 75194426 -70394862 + AluJo SINE Alu 1 312 0 703 321 128 59 chr10 75194426 75194755 -70394533 + L1M4 LINE L1 4121 4426 -1720 2149 146 0 0 chr10 75194755 75195063 -70394225 - AluJb SINE Alu -4 308 1 703 321 128 59 chr10 75195063 75195471 -70393817 + L1M4 LINE L1 4426 4926 -1220 323 259 71 108 chr10 75195966 75196062 -70393226 - L1MD3 LINE L1 -2341 5467 5369 1419 173 87 7 chr10 75196062 75196176 -70393112 + AluJo SINE Alu 1 105 -207 1737 139 87 21 chr10 75196176 75196463 -70392825 + AluSx SINE Alu 1 306 -6 1419 173 87 7 chr10 75196463 75196625 -70392663 + AluJo SINE Alu 105 299 -13 323 259 71 108 chr10 75196625 75196740 -70392548 - L1MD3 LINE L1 -2439 5369 5264 341 275 188 22 chr10 75196812 75196950 -70392338 + L1ME4a LINE L1 5883 6043 -78 1791 159 0 0 chr10 75197093 75197357 -70391931 - AluSx SINE Alu -23 289 26 2320 95 3 13 chr10 75197734 75198039 -70391249 + AluSx SINE Alu 2 303 -9 223 226 38 0 chr10 75198167 75198220 -70391068 - L2 LINE L2 -1 3312 3258 346 274 123 20 chr10 75198689 75198835 -70390453 - MIR SINE MIR -100 162 2 187 311 182 19 chr10 75199122 75199331 -70389957 + L3 LINE CR1 1077 1319 -258 2378 107 0 0 chr10 75199492 75199801 -70389487 + AluSx SINE Alu 1 309 -3 448 257 169 0 chr10 75199802 75199950 -70389338 - MIR SINE MIR -4 258 86 398 224 0 51 chr10 75200022 75200120 -70389168 - MER81 DNA DNA -21 93 1 330 311 40 33 chr10 75201085 75201100 -70388188 - MER5B DNA MER1_type -26 152 139 2047 146 17 0 chr10 75201100 75201402 -70387886 + AluJb SINE Alu 1 307 -5 330 311 40 33 chr10 75201402 75201537 -70387751 - MER5B DNA MER1_type -39 139 1 269 299 276 14 chr10 75201544 75201765 -70387523 - L3 LINE CR1 -52 1525 1247 1374 191 45 48 chr10 75202637 75202973 -70386315 + L1MC1 LINE L1 5998 6332 -1 889 133 48 24 chr10 75202968 75203133 -70386155 - L1MB2 LINE L1 -31 6140 5972 * 499 313 17 22 chr10 75203293 75203472 -70385816 - MIR SINE MIR -6 256 79 429 197 213 121 chr10 75203496 75203611 -70385677 - MIR SINE MIR 0 262 159 2030 85 0 0 chr10 75203611 75203857 -70385431 - AluSx SINE Alu -9 303 58 429 197 213 121 chr10 75203857 75203980 -70385308 - MIR SINE MIR -103 159 2 259 214 183 46 chr10 75204175 75204311 -70384977 + MIR3 SINE MIR 50 207 -1 * 626 261 0 18 chr10 75204296 75204461 -70384827 - MER5B DNA MER1_type -2 176 15 228 206 315 0 chr10 75204527 75204600 -70384688 - MER5A DNA MER1_type -80 109 14 726 169 20 34 chr10 75204623 75204771 -70384517 + MER5A DNA MER1_type 1 146 -43 571 246 58 12 chr10 75205064 75205235 -70384053 + MIR3 SINE MIR 30 208 0 240 270 45 11 chr10 75205455 75205544 -70383744 - HAL1 LINE L1 -47 2460 2369 349 188 62 62 chr10 75206305 75206401 -70382887 + MIR SINE MIR 54 149 -113 1926 154 0 44 chr10 75206428 75206747 -70382541 + AluJb SINE Alu 3 307 -5 2235 97 0 0 chr10 75206768 75207090 -70382198 + AluSg SINE Alu 2 323 0 2506 180 12 6 chr10 75207090 75207573 -70381715 + L1MB7 LINE L1 5684 6169 -15 306 286 67 0 chr10 75207573 75207678 -70381610 + MIR SINE MIR 138 249 -13 344 270 60 0 chr10 75208161 75208261 -70381027 - MIR SINE MIR -92 170 65 263 242 211 11 chr10 75208296 75208391 -70380897 + MIR SINE MIR 28 141 -67 1065 172 28 6 chr10 75209472 75209652 -70379636 + AluJo SINE Alu 1 184 -128 2547 75 0 0 chr10 75210586 75210891 -70378397 - AluSg1 SINE Alu 0 309 5 695 184 32 0 chr10 75210907 75211032 -70378256 - FLAM_C SINE Alu -2 131 3 237 108 0 0 chr10 75211045 75211082 -70378206 + (TCC)n Simple_repeat Simple_repeat 3 39 0 1438 237 68 6 chr10 75212147 75212625 -70376663 - L1ME1 LINE L1 -16 6168 5649 1658 153 7 18 chr10 75212629 75212910 -70376378 - AluJo SINE Alu 0 312 35 266 163 20 0 chr10 75212957 75213006 -70376282 - L1ME1 LINE L1 -498 5666 5617 1149 180 30 6 chr10 75213006 75213296 -70375992 + MER2 DNA MER2_type 1 344 -1 371 213 19 138 chr10 75213298 75213536 -70375752 - L1ME1 LINE L1 -550 5616 5351 2251 95 3 3 chr10 75213536 75213850 -70375438 - AluSq SINE Alu 0 314 1 371 213 19 138 chr10 75213850 75213892 -70375396 - L1ME1 LINE L1 -815 5351 5377 2367 72 3 25 chr10 75213892 75214210 -70375078 - AluY SINE Alu 0 311 1 371 213 19 138 chr10 75214210 75214284 -70375004 - L1ME1 LINE L1 -788 5378 5297 2494 182 133 36 chr10 75214617 75215519 -70373769 + L1M4 LINE L1 4589 5589 -595 1527 87 0 0 chr10 75215520 75215705 -70373583 + AluSc SINE Alu 1 185 -124 2104 144 30 91 chr10 75216726 75217199 -70372089 + LTR8 LTR ERV1 246 689 -2 384 222 9 28 chr10 75217207 75217315 -70371973 - MLT1E LTR MaLR -472 121 16 758 67 0 19 chr10 75217346 75217451 -70371837 - AluY SINE Alu -2 309 207 1005 104 0 0 chr10 75217493 75217618 -70371670 + AluSq/x SINE Alu 9 133 -180 201 108 0 0 chr10 75217679 75217716 -70371572 + (TTTTTG)n Simple_repeat Simple_repeat 2 38 0 621 326 112 10 chr10 75217814 75218197 -70371091 - L2 LINE L2 -778 2536 2115 460 154 0 0 chr10 75218243 75218308 -70370980 + AluJ/FLAM SINE Alu 2 66 -246 301 68 85 0 chr10 75218308 75218367 -70370921 - LTR61 LTR ERV1 0 595 532 240 214 0 18 chr10 75218385 75218441 -70370847 + FLAM SINE Alu 63 117 -16 687 274 7 39 chr10 75218466 75218747 -70370541 - AluSg SINE Alu -10 300 29 275 233 123 0 chr10 75219587 75219660 -70369628 - MER94 DNA DNA -52 82 1 194 371 56 11 chr10 75219861 75219950 -70369338 + MIR SINE MIR 119 211 -51 1953 146 26 7 chr10 75220011 75220313 -70368975 - AluJb SINE Alu -4 308 1 1933 156 63 81 chr10 75220313 75220871 -70368417 + L1MB8 LINE L1 5628 6175 -3 797 150 21 14 chr10 75221360 75221500 -70367788 + MLT1A2 LTR MaLR 1 141 -233 391 325 115 11 chr10 75223864 75224055 -70365233 + MIR SINE MIR 41 251 -11 1141 113 0 25 chr10 75224214 75224374 -70364914 - AluSx SINE Alu -156 156 1 331 216 294 7 chr10 75224375 75224528 -70364760 - MLT1E LTR MaLR -51 573 377 760 183 213 0 chr10 75224569 75224733 -70364555 - MLT1E LTR MaLR -394 199 1 287 234 180 0 chr10 75224741 75224852 -70364436 - L2 LINE L2 -311 2961 2831 231 269 0 32 chr10 75226022 75226097 -70363191 - MIR SINE MIR -111 97 24 387 259 96 48 chr10 75226158 75226324 -70362964 + MIR SINE MIR 88 261 -1 546 244 26 30 chr10 75226416 75226622 -70362666 + MIR SINE MIR 16 212 -50 206 321 94 38 chr10 75226687 75226846 -70362442 + L3b LINE CR1 1260 1427 -156 826 98 0 8 chr10 75226882 75227004 -70362284 - AluSg/x SINE Alu -17 295 175 524 175 39 0 chr10 75227320 75227423 -70361865 + MLT1A2 LTR MaLR 268 374 0 1681 175 7 11 chr10 75227874 75228159 -70361129 - AluJo SINE Alu -26 286 3 866 102 0 0 chr10 75228161 75228288 -70361000 - L1M2 LINE L1 -823 5489 5363 285 331 96 24 chr10 75228575 75228826 -70360462 - L2 LINE L2 -86 3186 2918 2283 113 0 3 chr10 75229235 75229545 -70359743 - AluSx SINE Alu -3 309 1 568 68 0 0 chr10 75229960 75230033 -70359255 + AluSp/q SINE Alu 229 301 -12 2229 120 0 0 chr10 75230109 75230408 -70358880 - AluSq SINE Alu -14 299 1 227 245 43 137 chr10 75230408 75230505 -70358783 - MER5B DNA MER1_type -50 128 46 279 287 35 11 chr10 75230416 75230503 -70358785 + MER5A DNA MER1_type 70 158 -31 1784 130 31 48 chr10 75230505 75230797 -70358491 - AluSx SINE Alu -12 300 14 227 245 43 137 chr10 75230797 75230838 -70358450 - MER5B DNA MER1_type -132 46 3 2470 73 0 3 chr10 75231409 75231425 -70357863 - AluY SINE Alu -9 302 287 198 0 0 0 chr10 75231425 75231447 -70357841 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 2470 73 0 3 chr10 75231447 75231733 -70357555 - AluY SINE Alu -24 287 1 324 191 315 62 chr10 75231761 75231939 -70357349 - MIR SINE MIR 0 262 40 433 323 31 57 chr10 75232497 75232700 -70356588 + MIR SINE MIR 15 213 -49 225 65 0 0 chr10 75232700 75232731 -70356557 + (TTCA)n Simple_repeat Simple_repeat 4 34 0 433 323 31 57 chr10 75232731 75232756 -70356532 + MIR SINE MIR 213 237 -25 364 245 128 10 chr10 75232957 75233059 -70356229 + L2 LINE L2 3158 3271 -1 1813 138 4 7 chr10 75233242 75233511 -70355777 - AluSx SINE Alu -4 308 41 221 305 18 22 chr10 75233537 75233692 -70355596 + CT-rich Low_complexity Low_complexity 1 154 0 1567 178 87 3 chr10 75234145 75234432 -70354856 + AluJb SINE Alu 1 311 -1 384 325 74 67 chr10 75234902 75235200 -70354088 + L2 LINE L2 2944 3243 -29 266 269 93 96 chr10 75235200 75235293 -70353995 + MER102b DNA MER1_type 3 95 -1333 1533 189 3 42 chr10 75235293 75235415 -70353873 + AluJo SINE Alu 13 138 -174 1578 118 4 13 chr10 75235415 75235644 -70353644 + AluSg/x SINE Alu 86 312 0 1533 189 3 42 chr10 75235644 75235833 -70353455 + AluJo SINE Alu 138 312 0 266 269 93 96 chr10 75235833 75236051 -70353237 + MER102b DNA MER1_type 95 313 -28 2102 127 6 13 chr10 75236068 75236382 -70352906 - AluSx SINE Alu 0 312 1 545 313 47 16 chr10 75236528 75236720 -70352568 - MIR SINE MIR -42 220 23 433 245 82 99 chr10 75236768 75236875 -70352413 + L2 LINE L2 3037 3144 -169 2454 96 0 0 chr10 75236875 75237187 -70352101 + AluSq SINE Alu 1 312 -1 433 245 82 99 chr10 75237187 75237361 -70351927 + L2 LINE L2 3144 3313 0 1443 108 0 15 chr10 75238215 75238418 -70350870 - AluSq SINE Alu -113 200 1 2430 110 0 0 chr10 75239188 75239497 -70349791 + AluSq SINE Alu 1 309 -4 24 53 0 0 chr10 75239704 75239742 -70349546 + AT_rich Low_complexity Low_complexity 1 38 0 2283 113 3 0 chr10 75240059 75240368 -70348920 + AluSx SINE Alu 1 310 -2 2328 118 0 0 chr10 75240595 75240900 -70348388 + AluSx SINE Alu 1 305 -7 211 272 80 32 chr10 75241642 75241767 -70347521 + L2 LINE L2 2933 3063 -209 818 310 29 4 chr10 75242006 75242248 -70347040 - MIR SINE MIR -1 261 14 1906 141 17 20 chr10 75242799 75243096 -70346192 - AluJb SINE Alu 0 312 17 2179 133 3 0 chr10 75243100 75243401 -70345887 - AluSx SINE Alu -10 302 1 1857 147 62 7 chr10 75244351 75244643 -70344645 - AluJb SINE Alu -4 308 1 311 246 38 72 chr10 75244805 75245021 -70344267 + HAL1b LINE L1 798 2394 -113 365 221 93 93 chr10 75245733 75245905 -70343383 - MLT1L LTR MaLR -262 353 182 311 192 0 14 chr10 75245971 75246044 -70343244 - MLT1L LTR MaLR -543 72 1 495 286 67 34 chr10 75246053 75246231 -70343057 + HAL1 LINE L1 2121 2304 -203 1025 181 141 0 chr10 75246232 75246431 -70342857 + AluJb SINE Alu 1 227 -85 282 237 42 51 chr10 75246437 75246555 -70342733 + HAL1 LINE L1 2364 2480 -27 27 29 0 0 chr10 75246567 75246601 -70342687 + AT_rich Low_complexity Low_complexity 1 34 0 1428 167 7 14 chr10 75246642 75246924 -70342364 + L1MB3 LINE L1 5887 6166 -17 2183 91 3 45 chr10 75247383 75247692 -70341596 - AluSc SINE Alu -13 296 1 1894 162 36 0 chr10 75247723 75248082 -70341206 - L1MB3 LINE L1 0 6183 5812 1545 210 13 26 chr10 75248093 75248398 -70340890 - AluJo SINE Alu -11 301 1 2220 124 0 3 chr10 75248463 75248762 -70340526 + AluSq SINE Alu 1 298 -15 863 243 37 14 chr10 75248824 75249038 -70340250 - MIR SINE MIR -21 241 23 329 317 0 33 chr10 75249599 75249719 -70339569 + MIR SINE MIR 22 137 -125 256 353 94 6 chr10 75249792 75249962 -70339326 - MIR SINE MIR -55 207 23 347 322 49 14 chr10 75250319 75250462 -70338826 + L2 LINE L2 2933 3080 -192 305 125 0 0 chr10 75250515 75250563 -70338725 + MIR SINE MIR 104 151 -111 213 294 15 0 chr10 75250939 75251007 -70338281 - MIR3 SINE MIR -53 155 87 258 274 81 75 chr10 75251477 75251632 -70337656 - L1ME4a LINE L1 0 6121 5963 228 67 0 0 chr10 75251632 75251662 -70337626 + (TG)n Simple_repeat Simple_repeat 1 30 0 258 274 81 75 chr10 75251662 75251692 -70337596 - L1ME4a LINE L1 -158 5963 5935 826 161 0 8 chr10 75251835 75251965 -70337323 + FLAM_C SINE Alu 1 129 -14 526 195 42 0 chr10 75252018 75252136 -70337152 - L1ME3A LINE L1 -198 5972 5850 309 162 132 15 chr10 75253269 75253337 -70335951 - MIR SINE MIR -94 168 93 316 324 60 13 chr10 75253434 75253616 -70335672 + MIR SINE MIR 37 230 -32 363 207 17 39 chr10 75253800 75253979 -70335309 + (CATATA)n Simple_repeat Simple_repeat 2 176 0 185 342 13 13 chr10 75254045 75254121 -70335167 + L2 LINE L2 3160 3235 -37 284 350 41 36 chr10 75255626 75255820 -70333468 + MIR SINE MIR 19 213 -49 339 271 96 104 chr10 75256169 75256324 -70332964 + MER112 DNA MER1_type 9 163 -97 1917 90 0 23 chr10 75256324 75256590 -70332698 - AluSq SINE Alu -53 260 1 339 271 96 104 chr10 75256590 75256674 -70332614 + MER112 DNA MER1_type 163 246 -14 305 320 34 29 chr10 75258750 75258925 -70330363 + MIR SINE MIR 33 208 -54 195 260 0 0 chr10 75259025 75259075 -70330213 - MIR SINE MIR -134 128 79 770 217 36 0 chr10 75259082 75259248 -70330040 + MER45C DNA AcHobo 1 172 -781 864 296 118 31 chr10 75259298 75259680 -70329608 + MER45C DNA AcHobo 281 695 -258 952 199 168 21 chr10 75259815 75260101 -70329187 + MER45B DNA AcHobo 713 1040 0 339 25 0 0 chr10 75260231 75260271 -70329017 + (CA)n Simple_repeat Simple_repeat 2 41 0 2131 51 4 26 chr10 75260618 75260891 -70328397 - AluY SINE Alu -44 267 1 1949 142 3 16 chr10 75260930 75261246 -70328042 + AluSq SINE Alu 1 312 -1 225 185 278 93 chr10 75261777 75261928 -70327360 + MIR SINE MIR 84 262 0 287 109 62 62 chr10 75261933 75261997 -70327291 - AluY SINE Alu -6 296 249 305 320 34 29 chr10 75264996 75265171 -70324117 + MIR SINE MIR 33 208 -54 195 260 0 0 chr10 75265271 75265321 -70323967 - MIR SINE MIR -134 128 79 770 217 36 0 chr10 75265328 75265494 -70323794 + MER45C DNA AcHobo 1 172 -781 864 296 118 31 chr10 75265544 75265926 -70323362 + MER45C DNA AcHobo 281 695 -258 952 199 168 21 chr10 75266061 75266347 -70322941 + MER45B DNA AcHobo 713 1040 0 339 25 0 0 chr10 75266477 75266517 -70322771 + (CA)n Simple_repeat Simple_repeat 2 41 0 2206 40 0 26 chr10 75266864 75267137 -70322151 - AluY SINE Alu -44 267 2 805 117 29 0 chr10 75267333 75267470 -70321818 + MLT2B2 LTR ERVL 1 141 -374 1924 123 3 23 chr10 75267472 75267774 -70321514 + AluSx SINE Alu 1 296 -16 225 185 278 93 chr10 75267779 75267930 -70321358 - MIR SINE MIR 0 262 84 2141 118 3 13 chr10 75268461 75268776 -70320512 - AluSq SINE Alu -1 312 1 824 166 14 0 chr10 75268918 75269057 -70320231 - FAM SINE Alu -44 141 1 494 196 9 0 chr10 75269062 75269174 -70320114 - L1M4 LINE L1 -984 5162 5050 319 314 19 69 chr10 75269174 75269246 -70320042 + MER5A DNA MER1_type 39 113 -76 2414 69 0 0 chr10 75269246 75269549 -70319739 + AluSg SINE Alu 2 304 -6 319 314 19 69 chr10 75269549 75269635 -70319653 + MER5A DNA MER1_type 113 189 0 582 184 18 0 chr10 75270941 75271055 -70318233 - MER20 DNA MER1_type -6 213 98 865 187 12 23 chr10 75271088 75271259 -70318029 - MLT1A1 LTR MaLR -51 314 146 215 122 0 24 chr10 75271259 75271300 -70317988 + (TTCC)n Simple_repeat Simple_repeat 3 42 0 240 35 0 0 chr10 75271323 75271352 -70317936 + (TCCCC)n Simple_repeat Simple_repeat 3 31 0 1156 165 100 35 chr10 75271366 75271596 -70317692 - AluJo SINE Alu -49 263 19 990 136 7 0 chr10 75271624 75271778 -70317510 - MLT1A1 LTR MaLR -210 155 1 457 125 25 0 chr10 75271800 75271880 -70317408 - MER20 DNA MER1_type -129 90 9 371 307 81 10 chr10 75272128 75272404 -70316884 + L2 LINE L2 2729 3026 -246 2080 106 10 7 chr10 75272405 75272698 -70316590 - AluSx SINE Alu -18 294 1 714 280 112 31 chr10 75273063 75273349 -70315939 + L2 LINE L2 3005 3313 0 198 370 8 59 chr10 75273389 75273508 -70315780 - MIR SINE MIR -64 144 32 186 43 0 0 chr10 75273516 75273539 -70315749 + (TC)n Simple_repeat Simple_repeat 2 24 0 872 152 13 13 chr10 75273539 75273690 -70315598 - FRAM SINE Alu -14 162 12 1624 259 62 19 chr10 75274101 75274630 -70314658 + L1ME3 LINE L1 5611 6162 0 181 195 0 24 chr10 75274739 75274780 -70314508 + MIR SINE MIR 23 62 -146 1594 173 0 21 chr10 75274843 75275176 -70314112 - AluJb SINE Alu 0 327 1 198 290 137 77 chr10 75275491 75275791 -70313497 - L2 LINE L2 -75 3238 2921 414 251 61 77 chr10 75275830 75276077 -70313211 - L1ME LINE L1 -413 5708 5466 196 339 27 9 chr10 75276095 75276207 -70313081 + MIR SINE MIR 125 238 -24 199 209 23 0 chr10 75276433 75276476 -70312812 + MIR SINE MIR 102 145 -63 1117 323 158 10 chr10 75276502 75277301 -70311987 - L2 LINE L2 -8 3305 2375 859 253 0 0 chr10 75277606 75277772 -70311516 + FRAM SINE Alu 1 157 -19 299 0 23 0 chr10 75278027 75278070 -70311218 - L1MB7 LINE L1 -19 6165 6122 346 163 0 133 chr10 75278071 75278150 -70311138 - Tigger5 DNA MER2_type 0 2323 2258 2250 100 0 0 chr10 75278150 75278450 -70310838 + AluSx SINE Alu 9 308 -4 346 163 0 133 chr10 75278450 75278468 -70310820 - Tigger5 DNA MER2_type -65 2258 2239 345 183 42 14 chr10 75278481 75278552 -70310736 + Tigger5 DNA MER2_type 1 73 -2250 286 197 15 15 chr10 75278569 75278635 -70310653 - Tigger5 DNA MER2_type -7 2316 2251 * 359 146 0 0 chr10 75278604 75278659 -70310629 - Tigger5 DNA MER2_type -2268 55 1 441 155 60 0 chr10 75278659 75278743 -70310545 - L1MB7 LINE L1 -62 6122 6034 * 3026 149 19 25 chr10 75278734 75279297 -70309991 + L1MB5 LINE L1 5590 6149 -25 2194 77 31 0 chr10 75279654 75279940 -70309348 + AluY SINE Alu 1 295 -16 1117 193 48 9 chr10 75280447 75280675 -70308613 + AluJb SINE Alu 66 302 -10 2179 116 0 0 chr10 75280676 75280979 -70308309 + AluSx SINE Alu 1 303 -9 1045 147 139 27 chr10 75280982 75281240 -70308048 + L1MB8 LINE L1 5888 6174 -4 1766 166 7 3 chr10 75282480 75282782 -70306506 + AluJb SINE Alu 1 303 -9 1111 259 39 18 chr10 75282785 75283175 -70306113 + L1ME1 LINE L1 5765 6162 -4 968 170 22 0 chr10 75283222 75283404 -70305884 + L1MB5 LINE L1 5989 6174 0 2471 63 0 0 chr10 75283468 75283770 -70305518 + AluY SINE Alu 1 302 -9 213 324 0 14 chr10 75284175 75284246 -70305042 + MER5A DNA MER1_type 5 74 -115 1969 112 3 41 chr10 75284247 75284561 -70304727 + AluSx SINE Alu 1 302 -10 1802 125 57 7 chr10 75284595 75284713 -70304575 + AluSq SINE Alu 1 112 -201 2395 78 0 0 chr10 75284713 75285019 -70304269 + AluY SINE Alu 1 306 -5 1802 125 57 7 chr10 75285019 75285197 -70304091 + AluSq SINE Alu 112 312 -1 28 0 0 0 chr10 75285197 75285225 -70304063 + AT_rich Low_complexity Low_complexity 1 28 0 2394 58 0 0 chr10 75285225 75285520 -70303768 + AluY SINE Alu 1 295 -16 2042 131 0 0 chr10 75285532 75285823 -70303465 + AluSx SINE Alu 1 291 -21 2020 129 0 0 chr10 75285826 75286120 -70303168 + AluSx SINE Alu 1 294 -18 2426 59 0 3 chr10 75286120 75286423 -70302865 + AluY SINE Alu 1 302 -9 260 195 0 98 chr10 75286456 75286538 -70302750 - MIR SINE MIR 0 262 189 21 0 0 0 chr10 75286741 75286762 -70302526 + AT_rich Low_complexity Low_complexity 1 21 0 958 128 51 6 chr10 75286884 75287040 -70302248 + FRAM SINE Alu 2 164 -12 965 213 33 53 chr10 75287040 75287341 -70301947 + L1ME1 LINE L1 5756 6050 -116 2373 84 0 3 chr10 75287342 75287652 -70301636 - AluSg SINE Alu -1 309 1 1020 164 10 53 chr10 75287653 75287860 -70301428 - LTR8 LTR ERV1 -493 198 1 2199 116 0 0 chr10 75287908 75288211 -70301077 - AluSx SINE Alu -9 303 1 288 0 0 0 chr10 75288217 75288249 -70301039 + (TA)n Simple_repeat Simple_repeat 2 33 0 2152 123 0 0 chr10 75288250 75288551 -70300737 - AluSx SINE Alu -11 301 1 551 147 70 19 chr10 75288560 75288698 -70300590 - MER113 DNA MER1_type? -310 211 66 639 269 66 15 chr10 75288698 75288895 -70300393 + MER63A DNA MER1_type 4 210 0 282 226 0 0 chr10 75288895 75288957 -70300331 - MER113 DNA MER1_type? -454 67 6 344 129 0 43 chr10 75289324 75289354 -70299934 + (TCCC)n Simple_repeat Simple_repeat 4 34 -36 2326 98 0 0 chr10 75289354 75289661 -70299627 - AluSq SINE Alu -6 307 1 276 30 0 0 chr10 75289661 75289694 -70299594 + (TTTTC)n Simple_repeat Simple_repeat 5 37 0 344 129 0 43 chr10 75289694 75289732 -70299556 + (TCCC)n Simple_repeat Simple_repeat 32 70 0 2305 97 0 3 chr10 75289743 75290053 -70299235 - AluSq SINE Alu -3 310 2 1710 155 16 88 chr10 75290128 75290514 -70298774 - MLT1B LTR MaLR -6 620 34 1490 99 5 0 chr10 75291223 75291434 -70297854 - AluJb SINE Alu -100 212 1 2086 228 67 12 chr10 75291462 75291972 -70297316 + MLT1H LTR MaLR 12 549 0 283 305 84 0 chr10 75292572 75292667 -70296621 + L2 LINE L2 3147 3249 -23 1879 194 87 23 chr10 75292727 75293166 -70296122 - MLT1C LTR MaLR 0 467 1 2117 78 24 7 chr10 75293232 75293526 -70295762 - AluSx SINE Alu -13 299 1 505 228 125 45 chr10 75294066 75294290 -70294998 + AluSq SINE Alu 46 287 -26 986 149 11 50 chr10 75294347 75294528 -70294760 - AluSx SINE Alu -138 174 1 1571 89 62 9 chr10 75294605 75294861 -70294427 + AluSx SINE Alu 47 314 0 1955 102 0 60 chr10 75294873 75295187 -70294101 + AluSg SINE Alu 13 307 -3 2226 93 0 3 chr10 75295189 75295522 -70293766 + AluY SINE Alu 1 311 0 548 230 89 2 chr10 75295584 75295744 -70293544 - MIR SINE MIR -85 123 3 2096 94 3 36 chr10 75295841 75296150 -70293138 - AluSx SINE Alu -13 299 1 1370 164 34 61 chr10 75296286 75296579 -70292709 - AluJo SINE Alu -23 289 5 231 264 0 0 chr10 75296912 75296965 -70292323 + MIR SINE MIR 103 155 -107 245 125 42 42 chr10 75297043 75297091 -70292197 + Charlie1 DNA MER1_type 1 48 -2713 1163 116 155 0 chr10 75297097 75297348 -70291940 + Charlie1 DNA MER1_type 2349 2638 -123 594 175 0 35 chr10 75297348 75297362 -70291926 - 7SLRNA srpRNA srpRNA -3 317 304 207 0 0 0 chr10 75297362 75297385 -70291903 + (TTG)n Simple_repeat Simple_repeat 2 24 0 594 175 0 35 chr10 75297385 75297484 -70291804 - 7SLRNA srpRNA srpRNA -16 304 208 562 154 27 0 chr10 75297484 75297594 -70291694 + Charlie1 DNA MER1_type 2648 2760 -1 212 162 0 0 chr10 75298263 75298300 -70290988 + (CTG)n Simple_repeat Simple_repeat 1 37 0 213 108 0 0 chr10 75298319 75298356 -70290932 + (CGG)n Simple_repeat Simple_repeat 3 39 0 26 30 0 0 chr10 75298440 75298473 -70290815 + GC_rich Low_complexity Low_complexity 1 33 0 1666 115 37 4 chr10 75300102 75300372 -70288916 - AluJb SINE Alu -33 279 1 1654 64 0 0 chr10 75300984 75301214 -70288074 - AluY SINE Alu 0 312 83 6167 61 29 40 chr10 75301214 75302379 -70286909 - SVA Other Other -588 1385 434 733 84 0 0 chr10 75302379 75302474 -70286814 - AluY SINE Alu -216 95 1 246 323 71 32 chr10 75303487 75303642 -70285646 - MIR3 SINE MIR -32 176 16 2363 88 27 0 chr10 75304125 75304422 -70284866 - AluSq SINE Alu -8 305 1 723 105 0 18 chr10 75305419 75305533 -70283755 + AluSg/x SINE Alu 199 310 -2 527 229 0 8 chr10 75305575 75305693 -70283595 + MIR SINE MIR 124 240 -22 1271 142 39 25 chr10 75305723 75305927 -70283361 + AluSq SINE Alu 27 233 -80 29 0 0 0 chr10 75305939 75305968 -70283320 + AT_rich Low_complexity Low_complexity 1 29 0 547 266 78 75 chr10 75305999 75306334 -70282954 + L1MEd LINE L1 425 760 -5359 1885 133 56 25 chr10 75306371 75306656 -70282632 + AluSg SINE Alu 1 294 -16 1624 171 4 4 chr10 75306680 75306943 -70282345 + AluJo SINE Alu 44 306 -6 283 157 0 0 chr10 75306990 75307041 -70282247 - U5 snRNA snRNA -65 51 1 995 145 0 47 chr10 75307073 75307245 -70282043 - AluJb SINE Alu -49 263 100 596 234 172 99 chr10 75308121 75308336 -70280952 - L1ME4a LINE L1 0 6121 5923 2530 72 0 3 chr10 75308336 75308641 -70280647 - AluY SINE Alu -7 304 1 596 234 172 99 chr10 75308641 75308720 -70280568 - L1ME4a LINE L1 -198 5923 5851 1902 127 23 47 chr10 75308720 75309020 -70280268 + AluSx SINE Alu 1 293 -19 596 234 172 99 chr10 75309020 75309108 -70280180 - L1ME4a LINE L1 -270 5851 5710 1940 144 27 7 chr10 75310251 75310543 -70278745 - AluSx SINE Alu -14 298 1 747 234 110 13 chr10 75310735 75310962 -70278326 - MIR SINE MIR 0 262 14 235 278 21 41 chr10 75311150 75311247 -70278041 - L2 LINE L2 -10 3262 3168 180 254 0 0 chr10 75311616 75311675 -70277613 + (CA)n Simple_repeat Simple_repeat 2 60 0 198 181 139 69 chr10 75311688 75311760 -70277528 + L2 LINE L2 3237 3313 0 186 328 0 0 chr10 75311987 75312045 -70277243 + MIR SINE MIR 176 233 -29 332 115 39 0 chr10 75312145 75312197 -70277091 + MER112 DNA MER1_type 1 54 -206 306 247 132 32 chr10 75313250 75313417 -70275871 - MIR SINE MIR -5 203 19 544 304 91 13 chr10 75313778 75314008 -70275280 + MIR SINE MIR 5 252 -10 2246 97 0 39 chr10 75314256 75314400 -70274888 + AluSp SINE Alu 1 128 -185 2182 89 55 7 chr10 75314400 75314692 -70274596 + AluSq SINE Alu 1 306 -7 2246 97 0 39 chr10 75314692 75314855 -70274433 + AluSp SINE Alu 128 296 -17 180 330 57 11 chr10 75314871 75314959 -70274329 + L2 LINE L2 3139 3230 -42 1678 136 97 3 chr10 75315691 75315999 -70273289 - MER1B DNA MER1_type 0 337 1 230 241 103 0 chr10 75317061 75317119 -70272169 + MIR SINE MIR 128 191 -71 25 0 0 0 chr10 75318522 75318547 -70270741 + GC_rich Low_complexity Low_complexity 1 25 0 23 78 0 0 chr10 75318652 75318703 -70270585 + GC_rich Low_complexity Low_complexity 1 51 0 247 200 140 17 chr10 75318871 75318951 -70270337 + L1ME1 LINE L1 6055 6124 -210 1591 128 0 0 chr10 75318951 75319170 -70270118 + AluJb SINE Alu 87 305 -7 247 200 140 17 chr10 75319170 75319208 -70270080 + L1ME1 LINE L1 6124 6332 -2 1935 170 0 0 chr10 75319246 75319535 -70269753 + AluJb SINE Alu 1 289 -23 263 104 21 0 chr10 75319798 75319846 -70269442 + (TC)n Simple_repeat Simple_repeat 2 50 0 544 257 112 0 chr10 75319846 75319998 -70269290 - MIR SINE MIR -66 196 28 334 268 134 16 chr10 75320548 75320675 -70268613 - MIR SINE MIR -100 162 21 210 250 261 0 chr10 75321424 75321512 -70267776 + MIR SINE MIR 34 144 -64 2398 78 3 19 chr10 75321717 75322026 -70267262 - AluSq SINE Alu -5 308 5 411 315 60 26 chr10 75322040 75322272 -70267016 - L1ME4a LINE L1 -5 6116 5877 2170 126 0 0 chr10 75322336 75322629 -70266659 + AluSx SINE Alu 1 293 -19 25 31 0 0 chr10 75322990 75323022 -70266266 + GC_rich Low_complexity Low_complexity 1 32 0 183 80 0 0 chr10 75323742 75323767 -70265521 + (CACCC)n Simple_repeat Simple_repeat 3 27 0 300 252 83 12 chr10 75323800 75323954 -70265334 - MIR SINE MIR -8 254 85 475 189 144 33 chr10 75323960 75324113 -70265175 + MER69A DNA AcHobo 1 170 -7 706 314 146 35 chr10 75324562 75325438 -70263850 + L2 LINE L2 1776 2870 -402 2490 80 3 0 chr10 75325438 75325739 -70263549 + AluSp SINE Alu 1 302 -11 706 314 146 35 chr10 75325739 75326188 -70263100 + L2 LINE L2 2870 3267 -5 2075 150 0 6 chr10 75326443 75326757 -70262531 - AluJb SINE Alu 0 312 1 732 244 79 9 chr10 75326923 75327152 -70262136 + MIR SINE MIR 17 261 -1 2220 69 35 21 chr10 75327788 75328076 -70261212 + AluY SINE Alu 2 293 -18 745 285 121 30 chr10 75328194 75328625 -70260663 - L2 LINE L2 -4 3309 2840 1098 231 48 45 chr10 75328627 75328878 -70260410 - L1ME3 LINE L1 -22 6140 5886 2407 93 0 7 chr10 75328878 75329179 -70260109 - AluSq SINE Alu -14 299 1 1098 231 48 45 chr10 75329179 75329287 -70260001 - L1ME3 LINE L1 -276 5886 5780 2319 102 0 7 chr10 75329290 75329593 -70259695 - AluSx SINE Alu -11 301 1 459 0 0 0 chr10 75329605 75329656 -70259632 + (TATG)n Simple_repeat Simple_repeat 4 54 0 2470 64 0 0 chr10 75329656 75329939 -70259349 - AluY SINE Alu -28 283 1 397 265 31 0 chr10 75329976 75330074 -70259214 - MIR3 SINE MIR -41 167 67 292 299 109 36 chr10 75330136 75330273 -70259015 - MIR SINE MIR -6 256 110 205 238 98 41 chr10 75330546 75330668 -70258620 + MIR3 SINE MIR 59 187 -21 872 140 0 56 chr10 75330869 75330913 -70258375 - L1MB3 LINE L1 -7 6176 6131 2291 108 3 0 chr10 75330913 75331208 -70258080 - AluSg SINE Alu -14 296 1 872 140 0 56 chr10 75331208 75331341 -70257947 - L1MB3 LINE L1 -52 6131 6009 191 312 22 65 chr10 75332117 75332255 -70257033 + L3 LINE CR1 1329 1460 -117 490 218 21 49 chr10 75332304 75332446 -70256842 + MIR SINE MIR 80 217 -45 262 302 87 0 chr10 75332676 75332804 -70256484 - MIR SINE MIR -63 145 31 2298 107 0 0 chr10 75332918 75333209 -70256079 - AluSq SINE Alu -22 291 1 441 0 0 0 chr10 75333368 75333417 -70255871 + (TG)n Simple_repeat Simple_repeat 2 50 0 800 92 0 0 chr10 75333417 75333515 -70255773 - AluSg/x SINE Alu -27 285 188 325 258 218 0 chr10 75333515 75333639 -70255649 - MIR SINE MIR -98 164 14 191 311 42 50 chr10 75333932 75334051 -70255237 + MER5A DNA MER1_type 72 189 0 196 286 0 0 chr10 75334351 75334393 -70254895 + L3 LINE CR1 1426 1467 -110 2393 103 0 0 chr10 75334458 75334759 -70254529 - AluSx SINE Alu -11 301 1 426 324 40 0 chr10 75334821 75334994 -70254294 + L1MC5 LINE L1 7745 7924 -37 240 153 28 28 chr10 75335187 75335259 -70254029 + (TTATA)n Simple_repeat Simple_repeat 1 72 0 2111 134 0 40 chr10 75335266 75335449 -70253839 - AluSx SINE Alu -4 308 142 2135 107 0 74 chr10 75335449 75335787 -70253501 - AluSq SINE Alu 0 313 1 2111 134 0 40 chr10 75335787 75335924 -70253364 - AluSx SINE Alu -170 142 1 657 328 51 8 chr10 75336162 75336477 -70252811 - L1MC4a LINE L1 -466 5704 5535 2347 88 0 0 chr10 75336922 75337226 -70252062 - AluSq SINE Alu 0 304 1 715 208 68 34 chr10 75337528 75337735 -70251553 - MIR SINE MIR -2 260 47 352 264 109 0 chr10 75337941 75338051 -70251237 + L2 LINE L2 3136 3257 -15 508 170 64 50 chr10 75338166 75338307 -70250981 + L2 LINE L2 3159 3301 -12 2256 83 20 23 chr10 75338317 75338618 -70250670 - AluSx SINE Alu -12 300 1 2441 53 0 4 chr10 75339006 75339287 -70250001 - AluY SINE Alu -31 280 1 186 224 0 0 chr10 75341152 75341201 -70248087 + CT-rich Low_complexity Low_complexity 4 52 0 2128 183 118 25 chr10 75343104 75343623 -70245665 - MLT1F1 LTR MaLR 0 567 1 2067 101 0 50 chr10 75344443 75344769 -70244519 - AluSx SINE Alu 0 311 1 180 0 0 0 chr10 75346152 75346172 -70243116 + (T)n Simple_repeat Simple_repeat 1 20 0 30 0 0 0 chr10 75346457 75346487 -70242801 + AT_rich Low_complexity Low_complexity 1 30 0 355 314 165 0 chr10 75347350 75347538 -70241750 + MIR SINE MIR 12 230 -32 2379 92 0 0 chr10 75347818 75348110 -70241178 - AluSg SINE Alu -18 292 1 1600 197 7 17 chr10 75348372 75348671 -70240617 + AluJo SINE Alu 1 296 -16 243 294 147 18 chr10 75349158 75349321 -70239967 + MIR3 SINE MIR 12 195 -13 851 131 0 29 chr10 75349732 75349869 -70239419 - FLAM_C SINE Alu 0 133 1 243 279 113 22 chr10 75350140 75350296 -70238992 - MIR SINE MIR -64 144 33 2193 125 7 0 chr10 75351611 75351908 -70237380 - AluJb SINE Alu -13 299 1 2383 94 0 0 chr10 75352559 75352856 -70236432 - AluSq SINE Alu -16 297 1 436 340 100 5 chr10 75352957 75353157 -70236131 - MIR SINE MIR -24 238 20 265 280 76 68 chr10 75353161 75353279 -70236009 - MIR3 SINE MIR -11 197 79 228 275 0 29 chr10 75353315 75353384 -70235904 + L2 LINE L2 3189 3255 -17 460 327 20 15 chr10 75354274 75354473 -70234815 - MIR SINE MIR -55 207 8 1459 96 80 0 chr10 75354571 75354770 -70234518 + AluSp SINE Alu 87 301 -12 2280 70 10 3 chr10 75355355 75355653 -70233635 + AluSp SINE Alu 2 301 -12 193 372 21 0 chr10 75355658 75355752 -70233536 + MIR SINE MIR 101 196 -66 2092 110 3 23 chr10 75356201 75356502 -70232786 + AluSx SINE Alu 1 295 -17 825 251 95 0 chr10 75356536 75356767 -70232521 + MIR SINE MIR 9 261 -1 2203 90 3 0 chr10 75357206 75357495 -70231793 - AluSc SINE Alu -19 290 1 2102 116 13 3 chr10 75357988 75358291 -70230997 + AluSg SINE Alu 1 306 -4 389 335 61 6 chr10 75359168 75359332 -70229956 - MIR SINE MIR 0 262 90 290 315 0 0 chr10 75360886 75360959 -70228329 - MIR SINE MIR -5 257 185 1771 156 3 14 chr10 75360995 75361320 -70227968 + AluSx SINE Alu 1 312 0 843 131 23 0 chr10 75361600 75361730 -70227558 + FLAM_C SINE Alu 1 133 0 1631 140 25 7 chr10 75361751 75362029 -70227259 + AluSp SINE Alu 1 283 -30 456 389 72 39 chr10 75362297 75362408 -70226880 - L1 LINE L1 -782 5364 5258 2187 108 6 13 chr10 75362408 75362722 -70226566 + AluSx SINE Alu 1 312 0 456 389 72 39 chr10 75362722 75362998 -70226290 - L1 LINE L1 -888 5258 4964 352 254 74 25 chr10 75362998 75363142 -70226146 + MIR SINE MIR 7 158 -50 4527 214 63 45 chr10 75363179 75363299 -70225989 - Charlie1a DNA MER1_type -1328 1433 1317 2259 97 13 0 chr10 75363299 75363597 -70225691 + AluSx SINE Alu 1 302 -10 4527 214 63 45 chr10 75363597 75364368 -70224920 - Charlie1a DNA MER1_type -1444 1317 562 2058 86 3 31 chr10 75364368 75364710 -70224578 + AluSp SINE Alu 1 334 0 4527 214 63 45 chr10 75364710 75364793 -70224495 - Charlie1a DNA MER1_type -2199 562 482 1927 136 10 10 chr10 75364793 75365087 -70224201 + AluJb SINE Alu 1 294 -18 4527 214 63 45 chr10 75365087 75365513 -70223775 - Charlie1a DNA MER1_type -2279 482 4 191 288 106 0 chr10 75365514 75365580 -70223708 + MIR SINE MIR 180 252 -10 31 68 0 0 chr10 75366115 75366174 -70223114 + AT_rich Low_complexity Low_complexity 1 59 0 2190 104 0 31 chr10 75366174 75366492 -70222796 + AluSq SINE Alu 1 308 -5 1744 162 11 0 chr10 75366492 75366770 -70222518 - AluJb SINE Alu -25 287 7 254 111 0 127 chr10 75366771 75366796 -70222492 - AluJb SINE Alu -163 139 112 473 47 16 0 chr10 75366796 75366860 -70222428 + (TG)n Simple_repeat Simple_repeat 2 66 0 254 111 0 127 chr10 75366860 75366897 -70222391 - AluJb SINE Alu -190 112 85 187 250 50 25 chr10 75366932 75367012 -70222276 - L2 LINE L2 -20 3252 3171 468 304 63 0 chr10 75367645 75367803 -70221485 + MIR3 SINE MIR 31 198 -10 315 0 0 0 chr10 75367842 75367877 -70221411 + (TG)n Simple_repeat Simple_repeat 1 35 0 1065 262 66 33 chr10 75370228 75370560 -70218728 - MLT1J LTR MaLR 0 511 161 1468 177 118 54 chr10 75370560 75370804 -70218484 - MSTD LTR MaLR 0 396 118 2417 61 3 0 chr10 75370804 75371100 -70218188 + AluSg SINE Alu 1 297 -13 1468 177 118 54 chr10 75371100 75371227 -70218061 - MSTD LTR MaLR -278 118 1 1065 262 66 33 chr10 75371227 75371317 -70217971 - MLT1J LTR MaLR -350 161 75 308 261 11 0 chr10 75371928 75372016 -70217272 - Charlie8 DNA MER1_type -2252 165 77 1959 119 6 53 chr10 75372271 75372589 -70216699 + AluSx SINE Alu 2 304 -8 326 248 86 0 chr10 75372640 75372745 -70216543 - L1MC4 LINE L1 -138 7904 7791 286 318 31 0 chr10 75373986 75374115 -70215173 - L1ME4a LINE L1 -20 6101 5969 354 385 68 19 chr10 75374698 75374903 -70214385 - MIR SINE MIR -23 239 25 229 346 12 0 chr10 75375028 75375109 -70214179 - L2 LINE L2 -3 3269 3188 895 234 19 72 chr10 75375146 75375189 -70214099 - MER33 DNA MER1_type -2261 324 280 1831 122 52 14 chr10 75375189 75375477 -70213811 - AluSx SINE Alu -13 299 1 895 234 19 72 chr10 75375477 75375605 -70213683 - MER33 DNA MER1_type -2305 280 173 1560 185 23 23 chr10 75375605 75375913 -70213375 - AluJo SINE Alu -4 308 1 895 234 19 72 chr10 75375913 75376047 -70213241 - MER33 DNA MER1_type -2412 173 34 626 279 29 17 chr10 75376107 75376279 -70213009 - MIR SINE MIR -25 237 64 392 225 40 73 chr10 75376350 75376400 -70212888 - L1ME1 LINE L1 -5 6161 6111 2150 127 0 0 chr10 75376400 75376699 -70212589 - AluSx SINE Alu -13 299 1 392 225 40 73 chr10 75376699 75376799 -70212489 - L1ME1 LINE L1 -55 6111 6016 1408 252 80 9 chr10 75376846 75376954 -70212334 - L1ME1 LINE L1 -249 5917 5818 2369 75 7 0 chr10 75376954 75377259 -70212029 - AluSp SINE Alu -6 307 1 1408 252 80 9 chr10 75377259 75377721 -70211567 - L1ME1 LINE L1 -348 5818 5276 196 246 0 35 chr10 75377737 75377794 -70211494 + MIR SINE MIR 177 231 -31 412 344 13 7 chr10 75378011 75378165 -70211123 + MIR3 SINE MIR 3 157 -51 868 135 0 23 chr10 75378167 75378300 -70210988 - FLAM_C SINE Alu -13 130 1 1740 188 38 57 chr10 75378305 75378620 -70210668 - MLT1A1 LTR MaLR 0 365 57 2336 106 0 0 chr10 75378620 75378932 -70210356 - AluSx SINE Alu 0 312 1 1740 188 38 57 chr10 75378932 75378988 -70210300 - MLT1A1 LTR MaLR -308 57 1 182 220 0 119 chr10 75379529 75379588 -70209700 - L3 LINE CR1 -98 1479 1428 2400 96 0 0 chr10 75379736 75380049 -70209239 - AluSq SINE Alu 0 313 1 236 303 119 9 chr10 75380394 75380503 -70208785 + MIR SINE MIR 121 241 -21 2134 93 3 7 chr10 75380585 75380875 -70208413 - AluSx SINE Alu -7 305 17 422 217 136 32 chr10 75380900 75381130 -70208158 - Charlie4 DNA MER1_type -15 1946 1704 251 264 99 0 chr10 75381519 75381610 -70207678 - Charlie4 DNA MER1_type -1677 284 185 384 220 42 59 chr10 75381887 75382005 -70207283 - MIR3 SINE MIR -25 183 68 387 223 29 0 chr10 75383577 75383680 -70205608 - L1ME4a LINE L1 -38 6083 5978 583 296 15 25 chr10 75383783 75383986 -70205302 - L1ME4a LINE L1 -301 5820 5620 2055 115 3 35 chr10 75384057 75384369 -70204919 - AluSx SINE Alu -10 302 1 223 295 39 26 chr10 75384744 75384822 -70204466 + L2 LINE L2 3180 3258 -14 303 328 25 0 chr10 75385304 75385421 -70203867 - MIR SINE MIR -68 140 14 382 244 14 18 chr10 75386190 75386301 -70202987 + MIR SINE MIR 43 151 -63 517 224 73 73 chr10 75386422 75386466 -70202822 - MIR3 SINE MIR -14 194 151 977 235 47 0 chr10 75386466 75386679 -70202609 + MER58A DNA MER1_type 2 224 0 517 224 73 73 chr10 75386679 75386826 -70202462 - MIR3 SINE MIR -56 152 3 2762 102 0 0 chr10 75386847 75387209 -70202079 - L1PA5 LINE L1 -9 6145 5784 357 272 22 0 chr10 75387434 75387526 -70201762 - MIR SINE MIR -15 247 154 1402 233 66 15 chr10 75387767 75388175 -70201113 - MLT1J LTR MaLR -82 429 1 280 345 73 34 chr10 75388647 75388853 -70200435 + L2 LINE L2 2996 3209 -63 642 283 27 11 chr10 75389466 75389653 -70199635 - MIR SINE MIR -72 190 1 442 330 52 74 chr10 75389922 75390286 -70199002 - L2 LINE L2 0 3272 2917 2025 118 44 3 chr10 75390774 75391070 -70198218 + AluSg SINE Alu 1 308 -2 1792 163 17 3 chr10 75392092 75392386 -70196902 + AluJb SINE Alu 1 298 -14 427 343 41 0 chr10 75392421 75392567 -70196721 - MIR SINE MIR -78 184 33 844 231 38 9 chr10 75392744 75392956 -70196332 - MER58A DNA MER1_type 0 224 7 338 349 7 41 chr10 75392961 75393107 -70196181 + L1ME LINE L1 5643 5783 -338 1684 141 0 103 chr10 75393157 75393505 -70195783 - AluJb SINE Alu 0 312 1 1401 186 51 18 chr10 75393534 75393808 -70195480 + AluJo SINE Alu 30 312 0 744 123 5 43 chr10 75393818 75394005 -70195283 + (GGA)n Simple_repeat Simple_repeat 1 180 0 376 187 8 32 chr10 75394011 75394134 -70195154 + GA-rich Low_complexity Low_complexity 2 121 0 413 284 8 23 chr10 75395207 75395356 -70193932 - MIR SINE MIR -65 143 1 303 325 22 0 chr10 75395908 75396035 -70193253 - MIR SINE MIR -73 135 46 422 232 8 0 chr10 75396069 75396315 -70192973 + (CA)n Simple_repeat Simple_repeat 1 248 0 397 229 39 39 chr10 75397185 75397364 -70191924 + (CA)n Simple_repeat Simple_repeat 2 180 0 269 253 37 19 chr10 75399727 75399889 -70189399 + (TG)n Simple_repeat Simple_repeat 2 166 0 198 342 86 0 chr10 75401419 75401536 -70187752 + L2 LINE L2 2833 2959 -313 750 126 94 16 chr10 75401556 75401576 -70187712 - AluSq/x SINE Alu -175 137 120 3887 154 41 10 chr10 75401576 75402263 -70187025 - L1MB3 LINE L1 0 6183 5476 750 126 94 16 chr10 75402263 75402369 -70186919 - AluSq/x SINE Alu -192 120 1 2213 166 55 7 chr10 75402372 75403019 -70186269 - L1MB3 LINE L1 -688 5492 4826 433 326 66 0 chr10 75403084 75403280 -70186008 - MIR SINE MIR -36 226 18 250 344 125 30 chr10 75404489 75404794 -70184494 - L2 LINE L2 -443 2871 2538 804 110 0 39 chr10 75404897 75405024 -70184264 - FLAM_C SINE Alu 0 143 22 2219 110 0 0 chr10 75405195 75405477 -70183811 + AluSx SINE Alu 1 310 0 232 36 0 0 chr10 75405477 75405505 -70183783 + (CAAAA)n Simple_repeat Simple_repeat 3 165 0 1499 186 4 4 chr10 75405937 75406190 -70183098 + AluJb SINE Alu 29 281 -31 213 39 0 0 chr10 75406193 75406219 -70183069 + (CAA)n Simple_repeat Simple_repeat 2 27 0 228 67 0 0 chr10 75406693 75406723 -70182565 + (CACCC)n Simple_repeat Simple_repeat 3 32 0 2166 104 21 0 chr10 75407264 75407552 -70181736 + AluSx SINE Alu 1 294 -18 949 122 0 0 chr10 75408178 75408309 -70180979 + FLAM_C SINE Alu 12 142 -1 525 193 29 50 chr10 75409400 75409540 -70179748 - MER5B DNA MER1_type -39 139 3 580 208 181 0 chr10 75409550 75409699 -70179589 - MER5A DNA MER1_type 0 189 14 3029 155 34 5 chr10 75409724 75410279 -70179009 - L1MB7 LINE L1 -25 6159 5589 188 274 32 16 chr10 75410284 75410346 -70178942 - MIR SINE MIR -122 86 24 929 270 104 31 chr10 75411703 75412278 -70177010 - L1MC5 LINE L1 -34 7927 7311 272 253 0 25 chr10 75412385 75412464 -70176824 - L1MC5 LINE L1 -781 7180 7104 220 202 204 44 chr10 75412841 75412983 -70176305 - MIR3 SINE MIR -67 141 9 2314 103 0 22 chr10 75413387 75413721 -70175567 + AluSx SINE Alu 1 312 0 208 299 0 26 chr10 75414246 75414323 -70174965 + CT-rich Low_complexity Low_complexity 4 78 0 1294 249 49 37 chr10 75414869 75415279 -70174009 + LTR16C LTR ERVL 77 491 0 347 279 215 17 chr10 75415328 75415565 -70173723 + L2 LINE L2 2989 3272 0 369 318 68 0 chr10 75415591 75415723 -70173565 - L3 LINE CR1 -90 1487 1347 935 119 8 0 chr10 75415832 75415958 -70173330 + FRAM SINE Alu 25 151 -25 459 0 0 0 chr10 75415958 75416009 -70173279 + (CATA)n Simple_repeat Simple_repeat 2 52 0 4202 113 21 0 chr10 75416930 75417552 -70171736 + MER41B LTR ERV1 1 635 0 3696 131 48 50 chr10 75417951 75418676 -70170612 + LTR8A LTR ERV1 1 724 -3 316 17 150 50 chr10 75419102 75419162 -70170126 + MADE1 DNA Mariner 3 68 -12 339 44 0 0 chr10 75419205 75419250 -70170038 + MADE1 DNA Mariner 36 80 0 2812 141 72 42 chr10 75419509 75419834 -70169454 - L1MB4 LINE L1 -10 6170 5817 2188 144 0 0 chr10 75419834 75420140 -70169148 + AluSx SINE Alu 2 307 -5 2812 141 72 42 chr10 75420140 75420408 -70168880 - L1MB4 LINE L1 -363 5817 5559 1780 143 9 22 chr10 75420463 75420812 -70168476 - MER4A LTR ERV1 -1 663 261 279 0 0 0 chr10 75421148 75421179 -70168109 + (TGAA)n Simple_repeat Simple_repeat 4 34 0 233 231 62 0 chr10 75421205 75421270 -70168018 + L2 LINE L2 3142 3210 -62 299 239 28 64 chr10 75421814 75421923 -70167365 - MIR SINE MIR -118 144 40 753 263 0 17 chr10 75422879 75423058 -70166230 - MER41D LTR ERV1 0 557 382 1640 137 44 48 chr10 75423124 75423417 -70165871 + AluJb SINE Alu 1 292 -20 185 289 19 0 chr10 75424127 75424190 -70165098 - MIR SINE MIR -66 142 90 29 0 0 0 chr10 75425160 75425189 -70164099 + AT_rich Low_complexity Low_complexity 1 29 0 1588 189 32 4 chr10 75425298 75425579 -70163709 - AluJo SINE Alu -17 295 7 2279 118 0 0 chr10 75425592 75425888 -70163400 - AluSx SINE Alu -16 296 1 522 273 73 87 chr10 75425945 75426314 -70162974 + L1M4 LINE L1 3422 3795 -2351 2274 123 0 0 chr10 75426314 75426614 -70162674 + AluSx SINE Alu 1 300 -12 522 273 73 87 chr10 75426614 75427507 -70161781 + L1M4 LINE L1 3795 4666 -1480 253 187 53 27 chr10 75427533 75427608 -70161680 + GA-rich Low_complexity Low_complexity 3 79 0 469 283 107 60 chr10 75427677 75428097 -70161191 - MLT1K LTR MaLR -23 565 126 497 260 8 0 chr10 75428261 75428388 -70160900 + FLAM_A SINE Alu 5 132 -1 458 265 159 27 chr10 75428392 75428982 -70160306 + L1P4 LINE L1 4906 5563 -603 1852 152 12 64 chr10 75429723 75430222 -70159066 + AluJo SINE Alu 1 482 0 186 240 0 0 chr10 75430240 75430290 -70158998 + GA-rich Low_complexity Low_complexity 30 79 0 383 321 70 72 chr10 75430433 75430994 -70158294 + L1MCa LINE L1 1166 3629 -2797 1429 236 31 18 chr10 75431125 75431291 -70157997 - L1ME3 LINE L1 -132 6032 5870 1705 106 0 4 chr10 75431291 75431517 -70157771 - AluSg/x SINE Alu -13 299 75 1429 236 31 18 chr10 75431517 75431815 -70157473 - L1ME3 LINE L1 -294 5870 5567 2024 139 3 0 chr10 75431870 75432158 -70157130 - AluJb SINE Alu -23 289 1 791 305 39 12 chr10 75432172 75432582 -70156706 - L1ME3 LINE L1 -1112 5034 4614 304 309 30 79 chr10 75433182 75433271 -70156017 - MIR SINE MIR -19 243 164 2415 109 0 0 chr10 75433271 75433583 -70155705 - AluSx SINE Alu 0 312 1 304 309 30 79 chr10 75433583 75433658 -70155630 - MIR SINE MIR -98 164 87 210 301 14 41 chr10 75435079 75435152 -70154136 - MIR SINE MIR -6 256 186 2218 125 0 0 chr10 75435230 75435525 -70153763 + AluSx SINE Alu 1 295 -17 4264 163 86 29 chr10 75435590 75436025 -70153263 - L1MA8 LINE L1 -23 6268 5859 2390 93 3 22 chr10 75436025 75436337 -70152951 - AluSq SINE Alu -7 306 1 4264 163 86 29 chr10 75436337 75436930 -70152358 - L1MA8 LINE L1 -432 5859 5168 425 273 16 8 chr10 75437293 75437414 -70151874 + MIR SINE MIR 16 137 -71 1097 183 0 52 chr10 75438136 75438366 -70150922 - AluJo SINE Alu -9 303 86 388 301 37 10 chr10 75438453 75438617 -70150671 + MIR SINE MIR 41 210 -52 450 240 99 8 chr10 75438628 75438749 -70150539 - L2 LINE L2 0 3313 3182 2548 97 16 0 chr10 75438967 75439339 -70149949 - MER83 LTR ERV1 -70 378 1 1015 245 190 20 chr10 75439381 75440143 -70149145 - L2 LINE L2 -253 3060 2168 203 61 30 0 chr10 75440632 75440665 -70148623 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 185 278 74 0 chr10 75440675 75440729 -70148559 + MIR SINE MIR 127 184 -78 534 220 88 38 chr10 75443234 75443393 -70145895 + MER5B DNA MER1_type 12 178 0 298 204 38 56 chr10 75445334 75445454 -70143834 - MIR SINE MIR -59 149 39 245 282 222 0 chr10 75446540 75446657 -70142631 - MIR SINE MIR -16 246 104 522 161 45 54 chr10 75448417 75448595 -70140693 + MIR SINE MIR 12 185 -58 2279 143 28 43 chr10 75449511 75449637 -70139651 + LTR26E LTR ERV1 75 201 -421 2597 56 0 3 chr10 75449637 75449942 -70139346 + AluY SINE Alu 1 304 -7 2279 143 28 43 chr10 75449942 75450287 -70139001 + LTR26E LTR ERV1 201 620 -2 2085 161 8 6 chr10 75450287 75450429 -70138859 - MER34C LTR ERV1 -124 461 321 2086 130 40 3 chr10 75450429 75450728 -70138560 + AluSx SINE Alu 1 310 -2 2085 161 8 6 chr10 75450728 75450942 -70138346 - MER34C LTR ERV1 -264 321 104 4437 149 111 46 chr10 75450943 75451982 -70137306 - MER52C LTR ERV1 -2 1276 1 2209 114 0 38 chr10 75451996 75452311 -70136977 + AluY SINE Alu 1 303 -8 526 157 22 0 chr10 75452311 75452400 -70136888 - MER34C LTR ERV1 -484 101 11 654 258 71 44 chr10 75452409 75452579 -70136709 - L1MEd LINE L1 -3095 3034 2870 1902 132 22 125 chr10 75452579 75452908 -70136380 - MER57A LTR ERV1 0 403 131 2181 129 7 0 chr10 75452908 75453210 -70136078 + AluSx SINE Alu 1 304 -8 1902 132 22 125 chr10 75453210 75453328 -70135960 - MER57A LTR ERV1 -272 131 2 654 258 71 44 chr10 75453328 75453521 -70135767 - L1MEd LINE L1 -3259 2870 2661 2411 148 16 69 chr10 75453526 75454209 -70135079 + MER4D LTR ERV1 1 903 0 360 277 11 23 chr10 75454212 75454389 -70134899 - L1MEd LINE L1 -3473 2656 2482 304 314 98 56 chr10 75454389 75454726 -70134562 - L1MEd LINE L1 -4975 1144 794 426 272 50 100 chr10 75455606 75455867 -70133421 - MIR SINE MIR -14 248 1 547 286 48 32 chr10 75456494 75456683 -70132605 + MIR SINE MIR 21 212 -50 1298 189 84 55 chr10 75457021 75457365 -70131923 - MLT1A1 LTR MaLR -2 363 10 799 196 0 0 chr10 75457617 75457750 -70131538 + FLAM_A SINE Alu 1 133 0 194 61 0 30 chr10 75457773 75457806 -70131482 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 253 204 37 0 chr10 75457882 75457936 -70131352 + L2 LINE L2 3258 3313 0 1227 314 61 48 chr10 75457944 75458763 -70130525 + L1MEd LINE L1 19 848 -5271 1371 268 36 29 chr10 75458807 75459332 -70129956 + L1MC4a LINE L1 5436 5811 -351 448 240 52 98 chr10 75459524 75459724 -70129564 + L1MEd LINE L1 948 1129 -4990 1955 153 0 0 chr10 75459724 75460025 -70129263 + AluJb SINE Alu 1 301 -11 448 240 52 98 chr10 75460025 75460149 -70129139 + L1MEd LINE L1 1129 1257 -4862 703 296 132 64 chr10 75460155 75460669 -70128619 + L1MEd LINE L1 1303 1889 -4421 2122 118 0 6 chr10 75460669 75460983 -70128305 - AluSx SINE Alu 0 312 1 703 296 132 64 chr10 75460983 75461246 -70128042 + L1MEd LINE L1 1889 2133 -4177 314 279 104 20 chr10 75461250 75461451 -70127837 + L1MEd LINE L1 2093 2310 -3819 290 93 0 160 chr10 75461450 75461474 -70127814 + L1MB3 LINE L1 6119 6145 -38 * 2259 90 0 7 chr10 75461474 75461775 -70127513 + AluSc SINE Alu 1 299 -10 290 93 0 160 chr10 75461775 75461825 -70127463 + L1MB3 LINE L1 6145 6181 -2 1572 249 97 75 chr10 75461826 75462612 -70126676 + L1MEd LINE L1 2288 3056 -3073 2721 10 0 0 chr10 75462612 75462917 -70126371 - AluYa5 SINE Alu -6 305 1 1572 249 97 75 chr10 75462917 75463064 -70126224 + L1MEd LINE L1 3056 3198 -2931 2387 60 3 0 chr10 75463064 75463363 -70125925 - AluY SINE Alu -11 300 1 1572 249 97 75 chr10 75463363 75463567 -70125721 + L1MEd LINE L1 3198 3450 -2679 1339 192 79 57 chr10 75463981 75464335 -70124953 - MLT1A1 LTR MaLR 0 365 4 1953 104 4 14 chr10 75464345 75464625 -70124663 + AluSq SINE Alu 1 277 -36 240 35 0 0 chr10 75464631 75464660 -70124628 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 724 153 7 35 chr10 75464668 75464812 -70124476 - MLT1A1-int LTR MaLR 0 1735 1596 712 176 49 14 chr10 75464816 75464958 -70124330 + FRAM SINE Alu 25 171 -5 7593 189 16 72 chr10 75464965 75465022 -70124266 - MLT1A1-int LTR MaLR -128 1607 1548 1674 116 71 8 chr10 75465022 75465310 -70123978 + AluSx SINE Alu 1 305 0 7593 189 16 72 chr10 75465310 75465387 -70123901 - MLT1A1-int LTR MaLR -187 1548 1468 2101 125 0 13 chr10 75465387 75465700 -70123588 + AluSq SINE Alu 1 309 -4 7593 189 16 72 chr10 75465700 75467264 -70122024 - MLT1A1-int LTR MaLR -267 1468 1 1827 201 13 45 chr10 75467267 75467641 -70121647 - MLT1A1 LTR MaLR -3 362 1 1254 144 26 4 chr10 75467706 75467935 -70121353 + L1MB7 LINE L1 4929 5162 -984 2385 54 0 7 chr10 75467937 75468233 -70121055 - AluY SINE Alu -17 294 1 1499 166 0 25 chr10 75468242 75468520 -70120768 - AluJb SINE Alu -16 296 26 1020 175 0 0 chr10 75468540 75468700 -70120588 - AluJo SINE Alu -152 160 1 4535 181 22 20 chr10 75468700 75469541 -70119747 + L1MB7 LINE L1 5152 5994 -190 2193 95 0 43 chr10 75469541 75469866 -70119422 + AluSx SINE Alu 1 311 -1 4535 181 22 20 chr10 75469866 75470051 -70119237 + L1MB7 LINE L1 5994 6177 -7 353 318 69 29 chr10 75470317 75470490 -70118798 - MIR3 SINE MIR -25 183 4 396 287 49 18 chr10 75471235 75471399 -70117889 - MIR SINE MIR -80 182 14 421 278 97 23 chr10 75471887 75472063 -70117225 + MIR3 SINE MIR 3 191 -17 186 222 264 14 chr10 75472446 75472518 -70116770 + L3 LINE CR1 1359 1448 -129 2133 114 0 0 chr10 75472640 75472939 -70116349 - AluSx SINE Alu -13 299 1 203 182 0 55 chr10 75473072 75473127 -70116161 + GA-rich Low_complexity Low_complexity 2 53 0 297 202 157 0 chr10 75473349 75473438 -70115850 + MIR3 SINE MIR 90 192 -16 265 205 157 0 chr10 75474460 75474543 -70114745 + MIR SINE MIR 30 125 -83 944 76 0 0 chr10 75474899 75475017 -70114271 - FLAM_C SINE Alu -15 118 1 281 161 97 16 chr10 75475167 75475229 -70114059 + MIR SINE MIR 31 97 -165 1591 74 46 5 chr10 75476520 75476736 -70112552 - MER30 DNA MER1_type 0 230 6 639 302 23 51 chr10 75477248 75477620 -70111668 - Charlie8 DNA MER1_type -2131 286 37 226 360 0 0 chr10 75478448 75478523 -70110765 - MIR SINE MIR -67 141 67 231 283 40 0 chr10 75478636 75478735 -70110553 + LTR33 LTR ERVL 1 103 -418 1505 158 47 4 chr10 75478935 75479188 -70110100 - AluJb SINE Alu -48 264 1 361 289 142 11 chr10 75479200 75479390 -70109898 + LTR33 LTR ERVL 305 519 -2 857 246 154 48 chr10 75479539 75479673 -70109615 - LTR16C LTR ERVL -12 479 361 2160 93 7 17 chr10 75479673 75479975 -70109313 + AluSx SINE Alu 1 299 -13 857 246 154 48 chr10 75479975 75480198 -70109090 - LTR16C LTR ERVL -130 361 84 594 222 114 17 chr10 75480373 75480549 -70108739 + LTR67 LTR ERVL 363 555 -2 1664 146 36 0 chr10 75480897 75481172 -70108116 - AluJo SINE Alu -15 297 13 186 118 0 0 chr10 75481850 75481884 -70107404 + (A)n Simple_repeat Simple_repeat 1 34 0 660 125 0 75 chr10 75481886 75482006 -70107282 - LTR26E LTR ERV1 -511 111 1 552 157 39 10 chr10 75482006 75482100 -70107188 + MER34C LTR ERV1 456 552 -33 1858 145 54 31 chr10 75482100 75482124 -70107164 + MER4D LTR ERV1 1 23 -880 1679 153 10 52 chr10 75482124 75482431 -70106857 + AluJb SINE Alu 1 294 -18 1858 145 54 31 chr10 75482431 75482758 -70106530 + MER4D LTR ERV1 23 360 -543 1855 136 31 28 chr10 75482734 75483090 -70106198 + MER4D LTR ERV1 219 527 -83 * 2071 118 40 3 chr10 75483099 75483403 -70105885 + LTR7 LTR ERV1 134 448 -2 650 168 30 8 chr10 75483406 75483537 -70105751 + MER4D LTR ERV1 770 903 0 314 264 47 19 chr10 75483574 75483680 -70105608 + L1M4 LINE L1 3049 3157 -2989 2046 134 0 0 chr10 75483693 75483991 -70105297 + AluSx SINE Alu 13 310 -2 636 275 14 5 chr10 75483991 75484202 -70105086 + L1M4 LINE L1 3270 3482 -2664 3978 191 52 8 chr10 75484231 75484861 -70104427 - L1MB7 LINE L1 -37 6147 5448 2026 176 11 19 chr10 75484861 75485225 -70104063 - MLT1A1 LTR MaLR -4 361 1 3978 191 52 8 chr10 75485225 75485668 -70103620 - L1MB7 LINE L1 -736 5448 5026 14704 119 37 92 chr10 75485669 75486215 -70103073 + Tigger2 DNA MER2_type 1 575 -2143 1506 141 16 8 chr10 75486215 75486463 -70102825 + AluJb SINE Alu 1 250 -62 14704 119 37 92 chr10 75486463 75487075 -70102213 + Tigger2 DNA MER2_type 575 1219 -1499 9656 28 4 151 chr10 75487075 75488615 -70100673 + SVA Other Other 71 1384 -2 14704 119 37 92 chr10 75488615 75488720 -70100568 + Tigger2 DNA MER2_type 1219 1328 -1390 760 188 8 0 chr10 75488720 75488848 -70100440 + FLAM_C SINE Alu 2 130 -13 14704 119 37 92 chr10 75488848 75490217 -70099071 + Tigger2 DNA MER2_type 1328 2611 -107 1666 113 0 0 chr10 75490298 75490527 -70098761 - AluSx SINE Alu -83 229 1 383 184 66 0 chr10 75490528 75490604 -70098684 - MSTC LTR MaLR -347 81 1 * 1116 272 19 26 chr10 75490604 75491017 -70098271 - MER74A LTR ERVL -93 465 56 1822 198 103 39 chr10 75491092 75491607 -70097681 - LTR10A LTR ERV1 -61 548 1 1891 127 0 0 chr10 75491670 75491937 -70097351 - AluSx SINE Alu -45 267 1 292 213 13 13 chr10 75491937 75492012 -70097276 - L1MB7 LINE L1 -1322 4824 4750 515 217 6 102 chr10 75492021 75492207 -70097081 - AluSg/x SINE Alu 0 302 133 393 39 0 0 chr10 75492240 75492291 -70096997 + (CA)n Simple_repeat Simple_repeat 2 52 0 2766 277 113 21 chr10 75492291 75493694 -70095594 + L1M4 LINE L1 3503 5034 -1112 1712 138 73 0 chr10 75493708 75493997 -70095291 + AluJb SINE Alu 1 310 -2 300 305 7 53 chr10 75494005 75494156 -70095132 + L3 LINE CR1 1394 1537 -40 38301 86 11 8 chr10 75494252 75500384 -70088904 - L1PA6 LINE L1 0 6154 13 257 227 11 91 chr10 75500606 75500694 -70088594 + MIR SINE MIR 117 197 -65 779 254 46 2 chr10 75501029 75501245 -70088043 - MIR SINE MIR -5 257 34 222 308 50 33 chr10 75501410 75501530 -70087758 + MIR3 SINE MIR 10 131 -77 1628 53 10 0 chr10 75501642 75501848 -70087440 + L1PB1 LINE L1 5944 6151 0 457 348 7 0 chr10 75501852 75501993 -70087295 - MIR SINE MIR -91 171 30 2221 219 98 60 chr10 75502034 75502729 -70086559 - MER50 LTR ERV1 0 734 14 519 159 185 73 chr10 75503186 75503337 -70085951 + LTR40a LTR ERVL 1 168 -351 2316 165 14 0 chr10 75503362 75503714 -70085574 + LTR18A LTR ERVL 1 357 0 13255 184 10 9 chr10 75503727 75506522 -70082766 + HERVL18 LTR ERVL 8 6047 0 2451 126 47 0 chr10 75506523 75506864 -70082424 + LTR18A LTR ERVL 1 357 0 740 235 157 11 chr10 75506864 75507138 -70082150 + LTR40b LTR ERVL 190 462 0 292 125 104 0 chr10 75507139 75507187 -70082101 + HERVL40 LTR ERVL 1 53 -5477 423 0 0 0 chr10 75507308 75507355 -70081933 + (TTA)n Simple_repeat Simple_repeat 2 48 0 338 187 120 0 chr10 75507536 75507611 -70081677 + HERVL40 LTR ERVL 3784 3867 -1663 630 222 42 28 chr10 75508581 75508725 -70080563 + MIR SINE MIR 28 173 -89 2110 144 0 0 chr10 75508862 75509153 -70080135 - AluSx SINE Alu -19 293 3 3690 152 29 50 chr10 75509314 75509453 -70079835 - MER50 LTR ERV1 -30 704 564 2106 82 45 0 chr10 75509453 75509762 -70079526 + AluSx SINE Alu 1 321 0 3690 152 29 50 chr10 75509762 75509916 -70079372 - MER50 LTR ERV1 -170 564 408 2328 106 13 0 chr10 75509916 75510217 -70079071 - AluSp SINE Alu -8 305 1 3690 152 29 50 chr10 75510217 75510640 -70078648 - MER50 LTR ERV1 -326 408 1 361 326 16 0 chr10 75511312 75511441 -70077847 - L2 LINE L2 -218 3054 2924 431 305 49 12 chr10 75511442 75511606 -70077682 - MIR3 SINE MIR -8 200 31 10571 114 17 7 chr10 75512156 75512953 -70076335 + Tigger1 DNA MER2_type 5 793 -1625 1761 167 0 55 chr10 75512953 75513283 -70076005 + AluJb SINE Alu 1 312 0 10571 114 17 7 chr10 75513283 75514096 -70075192 + Tigger1 DNA MER2_type 793 1631 -787 1007 90 77 0 chr10 75514094 75514249 -70075039 - Tigger1 DNA MER2_type -82 2336 2170 * 5445 102 17 3 chr10 75514267 75515050 -70074238 + Tigger1 DNA MER2_type 1625 2418 0 2355 109 0 3 chr10 75515076 75515387 -70073901 - AluSg SINE Alu 0 310 1 3084 179 56 2 chr10 75515387 75515956 -70073332 - Tigger7 DNA MER2_type -1887 600 1 256 198 56 24 chr10 75515970 75516096 -70073192 + (TATAA)n Simple_repeat Simple_repeat 1 130 0 427 282 52 72 chr10 75516454 75516745 -70072543 + L2 LINE L2 2944 3228 -44 255 223 9 98 chr10 75516922 75517034 -70072254 + MLT1L LTR MaLR 16 117 -498 784 239 43 0 chr10 75517251 75517460 -70071828 - MER58A DNA MER1_type -1 223 6 453 235 26 129 chr10 75517466 75517551 -70071737 + L1MC5 LINE L1 7499 7591 -370 2054 139 3 0 chr10 75517551 75517839 -70071449 - AluSx SINE Alu -23 289 1 453 235 26 129 chr10 75517839 75518209 -70071079 + L1MC5 LINE L1 7591 7907 -54 2137 121 6 10 chr10 75518228 75518579 -70070709 + AluSx SINE Alu 1 350 0 2044 118 7 39 chr10 75518626 75518932 -70070356 + AluSx SINE Alu 2 297 -15 619 293 25 5 chr10 75518969 75519167 -70070121 + MLT1L LTR MaLR 343 544 -71 1732 150 50 10 chr10 75520047 75520347 -70068941 - AluJb SINE Alu 0 312 1 1014 166 27 16 chr10 75520377 75520564 -70068724 - MER5A DNA MER1_type 0 189 1 349 295 23 31 chr10 75520706 75520835 -70068453 + MIR SINE MIR 23 150 -58 2299 93 3 13 chr10 75520892 75521239 -70068049 + AluSq SINE Alu 1 313 0 372 302 69 42 chr10 75521297 75521486 -70067802 + MIR SINE MIR 14 207 -55 536 279 45 101 chr10 75521739 75522097 -70067191 - L2 LINE L2 -2 3270 2933 333 280 28 34 chr10 75522219 75522463 -70066825 + MER41B LTR ERV1 54 430 -205 6890 69 9 1 chr10 75522531 75523491 -70065797 + MER11B LTR ERVK 1 1109 -127 391 316 89 28 chr10 75523661 75523952 -70065336 - L2 LINE L2 -528 2786 2478 372 238 112 49 chr10 75524419 75524562 -70064726 + MIR3 SINE MIR 36 187 -21 219 321 0 73 chr10 75525696 75525833 -70063455 - MIR SINE MIR -63 145 19 435 88 12 38 chr10 75525833 75525913 -70063375 + (TC)n Simple_repeat Simple_repeat 2 79 0 351 0 0 0 chr10 75525913 75525952 -70063336 + (CA)n Simple_repeat Simple_repeat 1 39 0 867 195 6 35 chr10 75526020 75526189 -70063099 - AluJb SINE Alu -15 297 134 236 211 0 19 chr10 75526686 75526738 -70062550 - MIR SINE MIR -101 161 111 283 170 75 28 chr10 75527185 75527291 -70061997 + (CCCCG)n Simple_repeat Simple_repeat 4 114 0 215 271 31 10 chr10 75527946 75528042 -70061246 + (TCTCTG)n Simple_repeat Simple_repeat 3 100 0 210 37 0 0 chr10 75528069 75528096 -70061192 + (TG)n Simple_repeat Simple_repeat 1 27 0 258 289 67 0 chr10 75530063 75530153 -70059135 + MIR SINE MIR 41 136 -126 317 265 0 0 chr10 75530166 75530234 -70059054 - L2 LINE L2 -48 3224 3157 481 229 51 81 chr10 75530849 75530932 -70058356 - MER106A DNA MER1_type 0 236 152 972 192 6 0 chr10 75530932 75531104 -70058184 - FAM SINE Alu -2 173 1 481 229 51 81 chr10 75531104 75531256 -70058032 - MER106A DNA MER1_type -84 152 8 289 269 215 7 chr10 75531276 75531425 -70057863 - MER5A DNA MER1_type -3 186 7 346 240 10 58 chr10 75532141 75532245 -70057043 + MIR3 SINE MIR 74 172 -36 271 188 14 43 chr10 75532890 75532959 -70056329 - MIR SINE MIR -83 179 113 414 222 10 0 chr10 75533225 75533324 -70055964 - L2 LINE L2 -236 3036 2937 369 296 28 0 chr10 75533514 75533622 -70055666 + MIR3 SINE MIR 81 191 -17 251 324 122 38 chr10 75533766 75533979 -70055309 - L2 LINE L2 -21 3251 3021 699 158 96 6 chr10 75534742 75534919 -70054369 + L1MB8 LINE L1 5981 6173 -5 2323 83 13 16 chr10 75534921 75535233 -70054055 + AluSq SINE Alu 1 311 -2 500 255 31 37 chr10 75535340 75535501 -70053787 + MIR SINE MIR 65 224 -38 1512 112 31 27 chr10 75535518 75535742 -70053546 - AluSx SINE Alu -87 225 1 289 274 30 148 chr10 75535839 75536142 -70053146 - L2 LINE L2 -36 3236 2970 707 248 114 1 chr10 75537223 75537428 -70051860 + MIR SINE MIR 4 230 -32 762 280 104 48 chr10 75538407 75538739 -70050549 - MLT1H LTR MaLR -2 547 174 2325 157 46 14 chr10 75538739 75539154 -70050134 - MSTA LTR MaLR 0 428 1 762 280 104 48 chr10 75539154 75539339 -70049949 - MLT1H LTR MaLR -375 174 1 393 219 146 0 chr10 75539340 75539463 -70049825 + MIR SINE MIR 86 226 -36 388 256 42 89 chr10 75540310 75540501 -70048787 - MIR3 SINE MIR -26 182 1 4983 56 0 10 chr10 75541084 75541671 -70047617 - SVA Other Other 0 1386 806 413 310 108 50 chr10 75541681 75542311 -70046977 - L1MEd LINE L1 -1105 1302 1 1544 186 81 3 chr10 75542587 75542872 -70046416 + AluJo SINE Alu 6 312 0 752 192 0 0 chr10 75542932 75543057 -70046231 + FLAM_C SINE Alu 1 125 -8 2066 152 7 0 chr10 75544357 75544653 -70044635 + AluSx SINE Alu 1 298 -14 451 230 36 22 chr10 75544677 75544816 -70044472 + AluSc SINE Alu 146 286 -23 704 66 11 0 chr10 75545090 75545181 -70044107 + AluSg/x SINE Alu 202 293 -17 867 111 8 0 chr10 75545274 75545391 -70043897 + FLAM_C SINE Alu 1 118 -15 300 199 153 69 chr10 75545577 75545708 -70043580 - L1MCa LINE L1 -4327 2099 1958 2417 203 26 20 chr10 75546275 75546813 -70042475 - L1MB7 LINE L1 -197 5987 5447 345 210 74 0 chr10 75546814 75546895 -70042393 - Tigger5 DNA MER2_type 0 2323 2237 364 217 60 0 chr10 75546903 75546986 -70042302 + Tigger5 DNA MER2_type 1 88 -2235 276 264 90 0 chr10 75547117 75547272 -70042016 - L1MB7 LINE L1 -741 5433 5265 656 110 0 46 chr10 75547553 75547662 -70041626 - AluSp/q SINE Alu 0 313 210 2466 62 12 6 chr10 75548795 75549120 -70040168 + THE1C LTR MaLR 49 375 0 270 202 0 45 chr10 75550510 75550599 -70038689 + (TATAA)n Simple_repeat Simple_repeat 3 87 0 5646 143 18 21 chr10 75551263 75552302 -70036986 - HERV9 LTR ERV1 -6478 1921 806 5869 126 17 20 chr10 75552407 75553533 -70035755 + L1P LINE L1 4304 5426 -728 313 318 9 0 chr10 75553877 75553984 -70035304 - MLT1H LTR MaLR -319 230 123 249 311 56 0 chr10 75555093 75555183 -70034105 + MLT1J LTR MaLR 103 197 -314 414 178 0 0 chr10 75555403 75555476 -70033812 + MER67D LTR ERV1 87 159 -355 1390 93 5 0 chr10 75555477 75555671 -70033617 + LTR12 LTR ERV1 80 274 -440 291 265 20 0 chr10 75555675 75555773 -70033515 + LTR30 LTR ERV1 544 643 -79 1345 187 78 36 chr10 75555773 75556269 -70033019 + HERV9 LTR ERV1 1 437 -2001 3363 202 74 7 chr10 75556411 75557761 -70031527 + L1M3f LINE L1 514 4008 -2320 4350 210 22 14 chr10 75558008 75559102 -70030186 - L1MB7 LINE L1 -1048 5098 3996 275 232 74 0 chr10 75559119 75559214 -70030074 - AluJb SINE Alu -17 285 184 281 118 20 0 chr10 75560552 75560603 -70028685 + MLT2B1 LTR ERVL 1 52 -468 1429 142 0 9 chr10 75560612 75560844 -70028444 - AluSg/x SINE Alu -12 300 71 1509 258 49 43 chr10 75560845 75561351 -70027937 + MLT2B1 LTR ERVL 64 520 0 428 268 167 0 chr10 75561743 75561911 -70027377 + LTR50 LTR ERVL 7 202 -593 5239 74 28 68 chr10 75562345 75563797 -70025491 - SVA Other Other -518 868 60 261 0 0 0 chr10 75563797 75563826 -70025462 + (AGGGGG)n Simple_repeat Simple_repeat 5 33 0 278 228 79 20 chr10 75565023 75565124 -70024164 - MLT1L LTR MaLR 0 615 509 1102 264 32 35 chr10 75565329 75565704 -70023584 - MLT1L LTR MaLR -207 408 35 510 252 0 0 chr10 75565838 75565953 -70023335 - MLT1H LTR MaLR -430 119 5 227 270 157 0 chr10 75568174 75568289 -70020999 + L2 LINE L2 2581 2713 -601 389 342 206 7 chr10 75568352 75568662 -70020626 + L2 LINE L2 2942 3313 0 2076 117 13 0 chr10 75569758 75570066 -70019222 + AluSx SINE Alu 1 312 0 492 274 71 18 chr10 75570570 75570738 -70018550 - MER5B DNA MER1_type -1 177 1 199 272 146 19 chr10 75570890 75570993 -70018295 - MIR3 SINE MIR -46 162 47 225 342 86 8 chr10 75571174 75571291 -70017997 - L1ME4a LINE L1 -32 6089 5964 2530 147 47 2 chr10 75571435 75571843 -70017445 - MSTB LTR MaLR 0 426 1 423 307 137 13 chr10 75572075 75572228 -70017060 - MIR SINE MIR -79 183 12 4130 170 52 28 chr10 75572892 75573819 -70015469 - L1MB7 LINE L1 -1 6183 5235 664 287 68 8 chr10 75574155 75574406 -70014882 - L2 LINE L2 -857 2457 2192 509 327 255 3 chr10 75574443 75575294 -70013994 - L2 LINE L2 -1364 1950 886 194 309 48 12 chr10 75576965 75577049 -70012239 - MIR3 SINE MIR -29 179 93 639 219 22 0 chr10 75577748 75577885 -70011403 + MIR SINE MIR 67 206 -56 345 328 0 17 chr10 75577972 75578088 -70011200 + L3 LINE CR1 1386 1499 -78 191 263 53 0 chr10 75579247 75579304 -70009984 + L2 LINE L2 2998 3057 -215 386 288 113 23 chr10 75579433 75579610 -70009678 + MARNA DNA Mariner 24 216 -370 342 259 0 24 chr10 75579850 75579935 -70009353 + L2 LINE L2 3230 3312 -1 210 143 0 0 chr10 75580029 75580064 -70009224 + (TG)n Simple_repeat Simple_repeat 1 35 0 208 149 32 64 chr10 75581086 75581151 -70008137 + MIR3 SINE MIR 103 165 -43 436 303 56 6 chr10 75581484 75581646 -70007642 + MIR SINE MIR 81 250 -12 314 241 5 0 chr10 75582881 75583097 -70006191 + (CA)n Simple_repeat Simple_repeat 1 217 0 265 225 7 7 chr10 75583130 75583272 -70006016 + (CA)n Simple_repeat Simple_repeat 2 143 0 200 279 6 0 chr10 75583315 75583487 -70005801 + (CA)n Simple_repeat Simple_repeat 2 174 0 192 243 0 0 chr10 75583564 75583638 -70005650 + (CA)n Simple_repeat Simple_repeat 1 74 0 2342 187 105 19 chr10 75584002 75584573 -70004715 - L1MB7 LINE L1 -19 6165 5546 202 317 0 24 chr10 75584809 75584891 -70004397 + MIR SINE MIR 43 122 -86 216 286 86 19 chr10 75585111 75585216 -70004072 + MER91A DNA MER1_type 1 112 -84 245 371 42 42 chr10 75585566 75585806 -70003482 + L2 LINE L2 2988 3227 -45 325 241 108 0 chr10 75586214 75586297 -70002991 + MIR SINE MIR 97 188 -74 859 255 42 9 chr10 75586324 75586540 -70002748 + MER58A DNA MER1_type 2 224 0 243 303 79 56 chr10 75586743 75586921 -70002367 - MIR SINE MIR -74 188 7 244 344 150 6 chr10 75587817 75587977 -70001311 - MER102a DNA MER1_type -32 298 116 2501 62 0 0 chr10 75588042 75588346 -70000942 - AluY SINE Alu -7 304 1 325 271 47 23 chr10 75589175 75589304 -69999984 + MIR SINE MIR 61 192 -70 263 266 0 13 chr10 75589569 75589648 -69999640 - MLT1K LTR MaLR 0 588 511 276 261 0 45 chr10 75589841 75589929 -69999359 - MLT1K LTR MaLR -306 282 199 255 236 18 0 chr10 75590109 75590164 -69999124 + L2 LINE L2 3243 3298 -15 200 274 82 89 chr10 75590178 75590324 -69998964 + L2 LINE L2 3149 3293 -20 1097 270 66 8 chr10 75590934 75591330 -69997958 - LTR37A LTR ERV1 0 426 8 331 186 43 0 chr10 75591897 75591967 -69997321 - MLT1K LTR MaLR -7 581 509 1787 153 13 10 chr10 75592458 75592758 -69996530 + AluJo SINE Alu 1 301 -11 304 342 82 22 chr10 75592770 75593001 -69996287 - MIR SINE MIR -3 259 15 236 247 37 25 chr10 75593055 75593136 -69996152 - MER34 LTR ERV1 -12 530 449 2218 97 10 3 chr10 75593213 75593523 -69995765 + AluSx SINE Alu 1 312 0 2009 110 16 16 chr10 75596918 75597228 -69992060 - AluSq SINE Alu -3 310 1 1522 163 23 69 chr10 75597228 75597534 -69991754 - AluJo SINE Alu -16 296 5 903 160 13 6 chr10 75597557 75597713 -69991575 + MER20 DNA MER1_type 37 193 -26 423 38 0 0 chr10 75597903 75597956 -69991332 + (CA)n Simple_repeat Simple_repeat 1 53 0 1777 160 0 20 chr10 75597956 75598250 -69991038 - AluJo SINE Alu -24 288 1 192 321 0 0 chr10 75598276 75598332 -69990956 - MIR SINE MIR -12 250 195 280 153 51 0 chr10 75598964 75599023 -69990265 + HsTC2 DNA Tc2 1837 1898 0 302 327 19 0 chr10 75599194 75599298 -69989990 + (CA)n Simple_repeat Simple_repeat 2 107 0 1546 245 75 64 chr10 75599411 75599555 -69989733 - HsTC2a DNA Tc2 -1156 744 603 2278 103 0 0 chr10 75599555 75599865 -69989423 - AluSg SINE Alu 0 310 1 1546 245 75 64 chr10 75599865 75599917 -69989371 - HsTC2a DNA Tc2 -1297 603 553 2391 80 0 6 chr10 75599917 75600229 -69989059 - AluY SINE Alu -1 310 1 1546 245 75 64 chr10 75600229 75600684 -69988604 - HsTC2a DNA Tc2 -1347 553 85 2892 163 155 122 chr10 75601077 75601424 -69987864 + L1MC3 LINE L1 6733 7067 -718 301 300 11 0 chr10 75601424 75601514 -69987774 + MLT1F1 LTR MaLR 35 125 -442 2892 163 155 122 chr10 75601514 75602095 -69987193 + L1MC3 LINE L1 7067 7784 -1 741 282 88 5 chr10 75602415 75602631 -69986657 + MIR SINE MIR 8 241 -21 309 278 153 5 chr10 75603452 75603642 -69985646 - L1M4c LINE L1 -4474 1908 1581 2331 153 11 14 chr10 75603929 75604295 -69984993 - MLT1A1 LTR MaLR 0 365 1 760 137 0 84 chr10 75606297 75606356 -69982932 - FLAM_C SINE Alu -187 125 81 2395 63 0 3 chr10 75606356 75606655 -69982633 + AluY SINE Alu 1 298 -13 760 137 0 84 chr10 75606655 75606726 -69982562 - FLAM_C SINE Alu -231 81 6 258 250 48 0 chr10 75606762 75606846 -69982442 + L1ME4a LINE L1 5866 5953 -168 271 354 20 0 chr10 75607020 75607119 -69982169 + L3 LINE CR1 1408 1508 -69 470 221 159 7 chr10 75607211 75607356 -69981932 - MER5A DNA MER1_type 0 189 23 602 311 85 13 chr10 75607569 75607804 -69981484 + MIR SINE MIR 1 252 -10 264 272 18 97 chr10 75608259 75608373 -69980915 + MIR SINE MIR 121 225 -37 202 326 33 11 chr10 75608510 75608602 -69980686 + MIR3 SINE MIR 81 174 -34 225 350 103 9 chr10 75609166 75609292 -69979996 + MIR SINE MIR 30 164 -62 263 333 20 0 chr10 75609393 75609492 -69979796 - MIR SINE MIR -72 136 36 314 204 11 0 chr10 75609601 75609689 -69979599 + (CA)n Simple_repeat Simple_repeat 2 90 0 411 294 0 8 chr10 75609714 75609840 -69979448 + (CA)n Simple_repeat Simple_repeat 2 126 0 413 235 126 0 chr10 75611438 75611557 -69977731 - L2 LINE L2 -1 3312 3179 180 0 0 0 chr10 75612353 75612373 -69976915 + (CCTG)n Simple_repeat Simple_repeat 2 21 0 371 275 46 15 chr10 75612795 75612926 -69976362 + MER5A DNA MER1_type 55 189 0 264 251 7 110 chr10 75615611 75615759 -69973529 - MIR SINE MIR -65 143 18 181 288 62 12 chr10 75615876 75615956 -69973332 + MIR SINE MIR 32 115 -147 289 173 0 0 chr10 75616321 75616373 -69972915 - MER5B DNA MER1_type 0 178 127 679 259 0 0 chr10 75616384 75616554 -69972734 + L1MB7 LINE L1 6000 6169 -15 506 182 111 0 chr10 75616567 75616666 -69972622 - MER5B DNA MER1_type -68 110 1 331 207 126 0 chr10 75616816 75616903 -69972385 - MIR SINE MIR -118 144 47 259 279 97 39 chr10 75617178 75617321 -69971967 - MIR SINE MIR -61 147 18 206 300 24 118 chr10 75618312 75618482 -69970806 - L3 LINE CR1 -91 1486 1333 274 305 95 0 chr10 75618616 75618711 -69970577 + MIR SINE MIR 150 253 -9 192 330 54 54 chr10 75618716 75618828 -69970460 - MIR SINE MIR -1 261 150 305 283 114 66 chr10 75618923 75619089 -69970199 - MIR SINE MIR -76 186 13 607 285 62 11 chr10 75619848 75620027 -69969261 + MER91B DNA MER1_type 3 190 0 360 275 160 0 chr10 75620605 75620736 -69968552 - L3 LINE CR1 -2 1575 1424 852 186 49 130 chr10 75621525 75621810 -69967478 + MIR SINE MIR 1 262 0 324 293 42 31 chr10 75621810 75621984 -69967304 - MIR SINE MIR -65 197 16 228 258 21 32 chr10 75623432 75623525 -69965763 + GA-rich Low_complexity Low_complexity 3 94 0 357 300 40 60 chr10 75623563 75623713 -69965575 - MIR SINE MIR -56 206 60 1123 231 153 48 chr10 75624183 75624680 -69964608 - MLT1H LTR MaLR 0 549 1 722 164 40 13 chr10 75624899 75625051 -69964237 + L1MB7 LINE L1 5927 6082 -102 1179 146 0 30 chr10 75625068 75625267 -69964021 + AluJb SINE Alu 1 193 -119 355 148 0 0 chr10 75625290 75625344 -69963944 + L1MB8 LINE L1 6107 6160 -18 296 310 33 54 chr10 75625747 75625931 -69963357 - MIR3 SINE MIR -27 181 2 246 283 0 0 chr10 75626398 75626458 -69962830 + (TG)n Simple_repeat Simple_repeat 2 61 0 299 298 179 18 chr10 75626615 75626783 -69962505 - MIR SINE MIR -29 233 39 303 332 166 5 chr10 75627110 75627297 -69961991 + MIR SINE MIR 45 261 -1 392 245 295 22 chr10 75627840 75627979 -69961309 - MIR SINE MIR -85 177 1 329 331 41 49 chr10 75627990 75628151 -69961137 - L2 LINE L2 -192 3080 2920 261 0 0 0 chr10 75628151 75628180 -69961108 + (TG)n Simple_repeat Simple_repeat 1 29 0 329 331 41 49 chr10 75628180 75628284 -69961004 - L2 LINE L2 -352 2920 2817 1938 187 31 9 chr10 75629232 75629654 -69959634 + L1M4 LINE L1 4832 5262 -884 208 222 206 0 chr10 75629659 75629722 -69959566 - L2 LINE L2 -17 3296 3221 234 286 38 38 chr10 75631927 75632032 -69957256 + L2 LINE L2 3205 3309 -4 216 211 39 0 chr10 75632042 75632094 -69957194 - MIR SINE MIR -128 134 81 233 277 99 10 chr10 75632098 75632199 -69957089 - MIR SINE MIR -93 169 60 254 303 41 41 chr10 75632698 75632820 -69956468 - MIR SINE MIR -27 235 114 * 525 327 48 47 chr10 75632819 75633394 -69955894 - L2 LINE L2 0 3272 2641 1824 135 0 91 chr10 75633541 75633882 -69955406 + AluJo SINE Alu 1 310 -2 1077 169 9 58 chr10 75633934 75634105 -69955183 + L1MB3 LINE L1 5970 6129 -54 2283 90 0 13 chr10 75634105 75634406 -69954882 + AluSq SINE Alu 1 297 -16 1077 169 9 58 chr10 75634406 75634459 -69954829 + L1MB3 LINE L1 6129 6183 0 293 302 34 20 chr10 75634480 75634629 -69954659 + L1ME LINE L1 5709 5859 -303 2495 179 26 7 chr10 75635001 75635453 -69953835 - MER65C LTR ERV1 0 461 1 249 318 36 55 chr10 75635904 75636014 -69953274 - MIR3 SINE MIR -1 207 100 239 197 254 0 chr10 75636913 75636984 -69952304 + MIR SINE MIR 61 149 -59 417 274 123 1 chr10 75636994 75637258 -69952030 + MER46C DNA MER2_type 3 334 -4 246 176 0 59 chr10 75637396 75637447 -69951841 - L2 LINE L2 0 3272 3225 342 264 47 31 chr10 75637556 75637685 -69951603 + MIR3 SINE MIR 78 208 0 222 220 0 0 chr10 75637856 75637915 -69951373 + CT-rich Low_complexity Low_complexity 2 60 0 488 301 119 5 chr10 75638022 75638215 -69951073 - MIR SINE MIR -16 246 32 748 217 39 11 chr10 75638509 75638689 -69950599 - MER5A DNA MER1_type -4 185 1 1538 158 90 11 chr10 75641294 75641573 -69947715 + AluJo SINE Alu 5 305 -7 2242 89 10 0 chr10 75643313 75643606 -69945682 - AluSp SINE Alu -17 296 1 258 277 0 0 chr10 75643612 75643677 -69945611 - L1ME LINE L1 -299 5822 5758 759 102 0 17 chr10 75643677 75643795 -69945493 + MSTA LTR MaLR 313 428 0 9801 136 15 37 chr10 75643797 75645410 -69943878 + MSTA-int LTR MaLR 3 1580 0 1992 143 178 6 chr10 75645410 75645775 -69943513 + MSTA LTR MaLR 1 428 0 1680 142 56 4 chr10 75645855 75646226 -69943062 + AluJo SINE Alu 1 385 0 184 378 12 12 chr10 75646293 75646375 -69942913 + MIR SINE MIR 13 94 -168 2394 158 6 27 chr10 75646422 75646567 -69942721 + L1MB3 LINE L1 5684 5830 -353 2204 101 13 0 chr10 75646567 75646873 -69942415 + AluSq SINE Alu 1 310 -3 2394 158 6 27 chr10 75646873 75647209 -69942079 + L1MB3 LINE L1 5830 6155 -28 262 260 49 65 chr10 75647386 75647452 -69941836 - MLT1K LTR MaLR -329 259 194 1990 183 43 125 chr10 75647452 75648118 -69941170 + LTR9 LTR ERV1 1 612 0 262 260 49 65 chr10 75648118 75648174 -69941114 - MLT1K LTR MaLR -394 194 139 234 0 0 0 chr10 75648949 75648975 -69940313 + (TTTTG)n Simple_repeat Simple_repeat 1 26 0 2051 126 0 0 chr10 75648977 75649263 -69940025 - AluSx SINE Alu -26 286 1 393 221 133 3 chr10 75649263 75649362 -69939926 + MIR SINE MIR 18 117 -97 181 311 66 0 chr10 75650202 75650263 -69939025 - L2 LINE L2 -3 3310 3246 287 298 203 15 chr10 75650289 75650615 -69938673 + L2 LINE L2 2530 2916 -398 478 248 102 53 chr10 75650690 75650916 -69938372 + L2 LINE L2 3077 3313 0 315 303 142 13 chr10 75651955 75652110 -69937178 + MER5B DNA MER1_type 1 175 -3 * 487 312 91 16 chr10 75652110 75652282 -69937006 + MIR SINE MIR 43 228 -34 209 310 42 0 chr10 75654007 75654078 -69935210 - MIR SINE MIR -81 181 108 316 326 76 22 chr10 75655408 75655592 -69933696 - MIR3 SINE MIR -3 205 12 2394 158 6 27 chr10 75656301 75656446 -69932842 + L1MB3 LINE L1 5684 5830 -353 2116 103 13 3 chr10 75656446 75656746 -69932542 + AluSq SINE Alu 1 303 -10 2394 158 6 27 chr10 75656746 75657082 -69932206 + L1MB3 LINE L1 5830 6155 -28 252 268 49 65 chr10 75657259 75657325 -69931963 - MLT1K LTR MaLR -329 259 194 1975 185 43 125 chr10 75657325 75657991 -69931297 + LTR9 LTR ERV1 1 612 0 252 268 49 65 chr10 75657991 75658047 -69931241 - MLT1K LTR MaLR -394 194 139 234 0 0 0 chr10 75658822 75658848 -69930440 + (TTTTG)n Simple_repeat Simple_repeat 1 26 0 2066 122 0 0 chr10 75658850 75659136 -69930152 - AluSx SINE Alu -26 286 1 409 221 133 3 chr10 75659136 75659235 -69930053 + MIR SINE MIR 18 117 -97 256 288 202 18 chr10 75660162 75660489 -69928799 + L2 LINE L2 2530 2916 -398 466 221 111 62 chr10 75660564 75660790 -69928498 + L2 LINE L2 3077 3313 0 258 304 139 32 chr10 75661829 75661987 -69927301 + MER5B DNA MER1_type 1 175 -3 * 468 312 91 16 chr10 75661987 75662159 -69927129 + MIR SINE MIR 43 228 -34 190 310 42 0 chr10 75663884 75663955 -69925333 - MIR SINE MIR -81 181 108 276 323 89 6 chr10 75665284 75665442 -69923846 - MIR3 SINE MIR -3 205 35 393 300 16 10 chr10 75666250 75666398 -69922890 - MIR SINE MIR -60 148 29 357 294 62 25 chr10 75668283 75668443 -69920845 - MIR3 SINE MIR -13 195 30 1554 278 195 24 chr10 75668782 75669894 -69919394 + L2 LINE L2 1985 3313 0 1222 269 36 11 chr10 75671878 75672239 -69917049 + L1ME3A LINE L1 5497 5866 -304 24 32 0 0 chr10 75672748 75672779 -69916509 + AT_rich Low_complexity Low_complexity 1 31 0 226 275 150 66 chr10 75672913 75673080 -69916208 - MIR3 SINE MIR -7 201 21 577 296 29 41 chr10 75673217 75673460 -69915828 + MER112 DNA MER1_type 1 240 -20 766 269 0 21 chr10 75674374 75674567 -69914721 + MIR SINE MIR 47 235 -27 273 317 81 16 chr10 75674597 75674720 -69914568 + MIR SINE MIR 132 262 0 280 314 23 0 chr10 75674771 75674857 -69914431 + MIR SINE MIR 88 175 -87 332 191 15 0 chr10 75675708 75675776 -69913512 - MIR SINE MIR -14 248 180 9072 249 45 15 chr10 75675800 75676821 -69912467 - L1MDa LINE L1 -888 5652 4664 180 0 0 0 chr10 75676821 75676841 -69912447 + (TTTC)n Simple_repeat Simple_repeat 1 20 0 9072 249 45 15 chr10 75676841 75676854 -69912434 - L1MDa LINE L1 -1876 4664 4653 369 43 0 0 chr10 75676854 75676901 -69912387 + (TTCTC)n Simple_repeat Simple_repeat 4 50 0 9072 249 45 15 chr10 75676901 75678001 -69911287 - L1MDa LINE L1 -1887 4653 3588 2128 121 0 26 chr10 75678001 75678308 -69910980 - AluSg1 SINE Alu -10 299 1 9072 249 45 15 chr10 75678308 75678512 -69910776 - L1MDa LINE L1 -2952 3588 3392 1921 163 7 13 chr10 75678512 75678819 -69910469 - AluJb SINE Alu -3 309 5 9072 249 45 15 chr10 75678819 75679986 -69909302 - L1MDa LINE L1 -3148 3392 1973 2948 165 14 8 chr10 75679986 75680490 -69908798 - MER84 LTR ERV1 0 507 1 443 125 25 25 chr10 75680493 75680573 -69908715 - MER84 LTR ERVI -427 80 1 13862 82 26 13 chr10 75680573 75682548 -69906740 - MER84-int LTR ERV1 0 4954 2954 11272 116 12 20 chr10 75682978 75684727 -69904561 - MER84-int LTR ERV1 -1984 2970 1236 6670 153 15 2 chr10 75684729 75685944 -69903344 - L1P LINE L1 -2638 3508 2278 1757 102 4 0 chr10 75685944 75686169 -69903119 + AluSg/x SINE Alu 75 300 -12 5072 220 80 16 chr10 75686170 75686977 -69902311 - L1PA12 LINE L1 -6270 1311 398 2938 123 83 83 chr10 75686977 75687589 -69901699 + LTR9 LTR ERV1 1 612 0 5072 220 80 16 chr10 75687589 75688007 -69901281 - L1PA12 LINE L1 -7183 398 8 8132 107 16 4 chr10 75688016 75689057 -69900231 - MER84-int LTR ERV1 -3709 1245 187 2467 89 3 3 chr10 75689057 75689370 -69899918 + AluSq SINE Alu 1 313 0 8132 107 16 4 chr10 75689370 75689496 -69899792 - MER84-int LTR ERV1 -4767 187 64 754 171 16 0 chr10 75689498 75689627 -69899661 + AluSq/x SINE Alu 2 132 -181 454 60 0 15 chr10 75689635 75689702 -69899586 - MER84-int LTR ERV1 -4888 66 1 3178 121 26 18 chr10 75689702 75690205 -69899083 - MER84 LTR ERV1 0 507 1 2704 167 82 47 chr10 75690205 75690958 -69898330 - L1MDa LINE L1 -4649 1891 1112 277 189 92 140 chr10 75690930 75691258 -69898030 - L1M4 LINE L1 -2713 3827 3516 * 2074 114 0 14 chr10 75691369 75691666 -69897622 - AluY SINE Alu -16 295 3 428 139 191 0 chr10 75691668 75691783 -69897505 - L1MC/D LINE L1 -2372 5436 5300 643 255 42 37 chr10 75692011 75692227 -69897061 + MIR SINE MIR 20 236 -26 267 279 0 15 chr10 75692885 75692953 -69896335 + L2 LINE L2 3175 3241 -72 259 196 0 0 chr10 75692965 75693021 -69896267 + L1ME3A LINE L1 6054 6109 -61 806 289 62 31 chr10 75693084 75693409 -69895879 - L3 LINE CR1 -39 1538 1204 210 365 45 37 chr10 75693468 75693712 -69895576 - L2 LINE L2 -131 3141 2896 2455 180 58 9 chr10 75694861 75695306 -69893982 - MLT1C LTR MaLR 0 467 1 218 368 73 7 chr10 75695687 75695823 -69893465 + L2 LINE L2 2659 2803 -511 465 225 16 23 chr10 75695884 75696013 -69893275 + L1ME3A LINE L1 6037 6164 -6 231 143 54 18 chr10 75696719 75696775 -69892513 + Charlie8 DNA MER1_type 91 148 -2269 1661 159 76 0 chr10 75696811 75697102 -69892186 + AluSx SINE Alu 2 312 0 566 256 52 65 chr10 75697132 75697362 -69891926 + L2 LINE L2 3084 3310 -3 21 0 0 0 chr10 75697755 75697776 -69891512 + GC_rich Low_complexity Low_complexity 1 21 0 257 213 33 16 chr10 75698185 75698246 -69891042 - MIR SINE MIR -66 142 81 255 261 120 11 chr10 75698419 75698511 -69890777 - MER5A DNA MER1_type -50 139 38 288 290 19 28 chr10 75698635 75698742 -69890546 + MER20B DNA MER1_type 6 111 -672 752 300 55 65 chr10 75698858 75699003 -69890285 + MER20B DNA MER1_type 154 299 -484 2050 103 59 0 chr10 75699003 75699298 -69889990 + AluSx SINE Alu 3 312 0 752 300 55 65 chr10 75699298 75699788 -69889500 + MER20B DNA MER1_type 299 783 0 769 133 71 0 chr10 75700057 75700170 -69889118 + FLAM_C SINE Alu 2 122 -21 204 40 0 0 chr10 75700171 75700196 -69889092 + (TAA)n Simple_repeat Simple_repeat 1 25 0 320 316 76 32 chr10 75700196 75700354 -69888934 - MIR SINE MIR -16 246 82 1867 133 78 39 chr10 75700561 75700922 -69888366 - THE1C LTR MaLR 0 375 1 992 189 0 6 chr10 75701845 75702020 -69887268 + FAM SINE Alu 2 175 0 636 196 165 13 chr10 75702053 75702211 -69887077 - MER5A DNA MER1_type -1 188 7 273 57 0 0 chr10 75702320 75702355 -69886933 + (TC)n Simple_repeat Simple_repeat 2 36 0 414 0 0 0 chr10 75702355 75702401 -69886887 + (CA)n Simple_repeat Simple_repeat 1 46 0 330 271 99 53 chr10 75702432 75702583 -69886705 + MIR3 SINE MIR 45 202 -6 272 306 62 38 chr10 75702659 75702819 -69886469 + MIR SINE MIR 65 228 -34 766 196 0 8 chr10 75703667 75703800 -69885488 - FLAM_C SINE Alu 0 133 2 336 262 42 24 chr10 75704557 75704725 -69884563 + G-rich Low_complexity Low_complexity 5 175 0 26 30 0 0 chr10 75704753 75704786 -69884502 + GC_rich Low_complexity Low_complexity 1 33 0 2247 81 3 0 chr10 75705447 75705761 -69883527 - AluSx SINE Alu 0 315 1 909 213 6 11 chr10 75705870 75706044 -69883244 - FAM SINE Alu -2 173 1 313 360 27 20 chr10 75706141 75706288 -69883000 + L2 LINE L2 3117 3264 -8 2085 118 3 14 chr10 75706532 75706866 -69882422 - AluSq SINE Alu 0 331 1 180 0 0 0 chr10 75706868 75706888 -69882400 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 252 307 18 97 chr10 75708024 75708070 -69881218 - L3 LINE CR1 -10 1567 1519 1950 148 3 26 chr10 75708070 75708380 -69880908 - AluJb SINE Alu -9 303 1 252 307 18 97 chr10 75708380 75708447 -69880841 - L3 LINE CR1 -58 1519 1463 471 261 241 5 chr10 75708527 75708730 -69880558 - MIR SINE MIR -2 260 10 506 170 89 77 chr10 75708874 75708937 -69880351 + MER20B DNA MER1_type 545 606 -177 2116 140 7 0 chr10 75708937 75709230 -69880058 + AluSx SINE Alu 1 295 -17 506 170 89 77 chr10 75709230 75709401 -69879887 + MER20B DNA MER1_type 606 782 -1 1195 181 54 0 chr10 75709959 75710163 -69879125 + MER20 DNA MER1_type 1 215 -4 271 237 82 21 chr10 75711145 75711242 -69878046 - LTR33 LTR ERVL -66 455 353 218 196 0 0 chr10 75711585 75711631 -69877657 + CT-rich Low_complexity Low_complexity 1 46 0 192 97 0 0 chr10 75712124 75712155 -69877133 + (TA)n Simple_repeat Simple_repeat 1 31 0 1199 61 7 0 chr10 75713399 75713547 -69875741 - AluSg/x SINE Alu -5 307 159 615 295 29 10 chr10 75713633 75713840 -69875448 - LTR33 LTR ERVL -288 233 23 277 234 266 38 chr10 75714065 75714223 -69875065 - L3 LINE CR1 -11 1566 1373 2050 110 10 14 chr10 75714340 75714630 -69874658 + AluSx SINE Alu 1 289 -23 489 97 43 11 chr10 75714631 75714724 -69874564 + (CAATA)n Simple_repeat Simple_repeat 4 99 0 210 91 0 0 chr10 75714726 75714759 -69874529 + (CATTC)n Simple_repeat Simple_repeat 1 33 0 298 285 57 25 chr10 75714778 75714936 -69874352 - MLT1J LTR MaLR -139 372 210 1076 292 63 17 chr10 75715183 75715839 -69873449 - L1ME3A LINE L1 -216 5954 5265 1248 219 151 5 chr10 75716120 75716630 -69872658 - L1ME3 LINE L1 0 6162 5542 729 223 0 43 chr10 75716748 75716932 -69872356 - FRAM SINE Alu 0 176 1 345 213 53 163 chr10 75717922 75718183 -69871105 - MIR SINE MIR -10 252 21 26 0 0 0 chr10 75718535 75718561 -69870727 + AT_rich Low_complexity Low_complexity 1 26 0 1231 150 78 36 chr10 75718651 75718957 -69870331 - L1MB8 LINE L1 -51 6127 5809 1300 204 72 16 chr10 75719251 75719639 -69869649 - LTR37A LTR ERV1 0 426 17 4157 155 67 43 chr10 75719656 75720534 -69868754 - MER21A LTR ERV1 -32 899 1 22 0 0 0 chr10 75720592 75720614 -69868674 + AT_rich Low_complexity Low_complexity 1 22 0 344 214 34 34 chr10 75722850 75722939 -69866349 + MIR3 SINE MIR 113 201 -7 236 297 141 14 chr10 75723254 75723367 -69865921 + MIR SINE MIR 1 140 -68 2525 63 3 0 chr10 75723899 75724201 -69865087 + AluY SINE Alu 1 303 -8 371 235 24 21 chr10 75724811 75724919 -69864369 + MIR SINE MIR 34 144 -64 269 167 22 44 chr10 75724932 75725022 -69864266 + CT-rich Low_complexity Low_complexity 3 90 0 1532 142 7 80 chr10 75725026 75725314 -69863974 - AluJo SINE Alu -24 288 22 67 14 0 0 chr10 75725437 75725511 -69863777 + AT_rich Low_complexity Low_complexity 1 74 0 2264 113 0 0 chr10 75725528 75725821 -69863467 - AluSx SINE Alu -19 293 1 263 200 18 0 chr10 75725993 75726048 -69863240 + L2 LINE L2 3257 3312 -1 1540 203 89 16 chr10 75726188 75726557 -69862731 - MSTD LTR MaLR 0 396 1 410 222 141 45 chr10 75727120 75727318 -69861970 - MER112 DNA MER1_type -6 254 38 187 333 0 37 chr10 75727998 75728052 -69861236 - MIR SINE MIR -87 121 70 1288 91 30 25 chr10 75728247 75728445 -69860843 + MER30 DNA MER1_type 1 199 -31 456 298 76 18 chr10 75728635 75728806 -69860482 + MIR3 SINE MIR 20 200 -8 1808 171 10 62 chr10 75729766 75730151 -69859137 - MLT1A1 LTR MaLR 0 365 1 689 299 63 15 chr10 75730477 75730812 -69858476 - L1MC4a LINE L1 -1914 5894 5544 2129 151 107 8 chr10 75730849 75731233 -69858055 - MSTB LTR MaLR -4 422 1 384 313 0 0 chr10 75731335 75731434 -69857854 - L2 LINE L2 -22 3291 3193 229 331 92 35 chr10 75731716 75731858 -69857430 + L2 LINE L2 3123 3272 0 1024 249 74 28 chr10 75732197 75732523 -69856765 + MER58B DNA MER1_type 1 341 0 2263 85 0 0 chr10 75733170 75733482 -69855806 - AluSc SINE Alu 0 312 1 287 247 59 24 chr10 75733813 75733898 -69855390 - L2 LINE L2 -25 3247 3160 861 159 48 48 chr10 75734864 75735072 -69854216 - L1MB3 LINE L1 -8 6175 5968 723 113 30 0 chr10 75735219 75735352 -69853936 - L1MA8 LINE L1 -8 6283 6147 2266 112 3 3 chr10 75735580 75735892 -69853396 - AluSx SINE Alu 0 312 1 305 242 48 48 chr10 75736573 75736697 -69852591 + MIR SINE MIR 67 190 -72 1189 136 96 18 chr10 75736787 75736898 -69852390 - L1MA8 LINE L1 -2 6289 6188 2503 78 3 0 chr10 75736898 75737205 -69852083 - AluSg SINE Alu -2 308 1 1189 136 96 18 chr10 75737205 75737373 -69851915 - L1MA8 LINE L1 -103 6188 5988 233 332 65 60 chr10 75738284 75738483 -69850805 + MIR SINE MIR 2 201 -61 824 143 0 0 chr10 75738625 75738758 -69850530 - FLAM_C SINE Alu 0 133 1 1037 223 81 48 chr10 75738942 75739314 -69849974 + L1MC4a LINE L1 5609 5992 -1816 26 30 0 0 chr10 75739433 75739466 -69849822 + AT_rich Low_complexity Low_complexity 1 33 0 863 170 5 98 chr10 75739744 75739968 -69849320 + MER20 DNA MER1_type 17 219 0 819 237 52 0 chr10 75740133 75740344 -69848944 - MER58A DNA MER1_type 0 224 3 273 163 0 0 chr10 75741142 75741191 -69848097 + (TG)n Simple_repeat Simple_repeat 2 50 0 781 276 28 9 chr10 75741202 75741419 -69847869 - L2 LINE L2 0 3313 3093 2175 122 0 13 chr10 75742614 75742918 -69846370 - AluSx SINE Alu -12 300 1 895 226 73 36 chr10 75743848 75744096 -69845192 + MIR SINE MIR 6 262 0 1023 148 94 12 chr10 75744155 75744344 -69844944 - L1MD3 LINE L1 0 7995 7780 183 100 0 0 chr10 75744344 75744374 -69844914 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 1023 148 94 12 chr10 75744374 75744428 -69844860 - L1MD3 LINE L1 -215 7780 7732 2146 135 0 3 chr10 75744443 75744739 -69844549 - AluSx SINE Alu -17 295 1 1837 185 0 6 chr10 75746568 75746881 -69842407 - AluJb SINE Alu -1 311 1 226 229 82 0 chr10 75746891 75746952 -69842336 + MIR3 SINE MIR 111 176 -32 257 346 22 44 chr10 75747034 75747170 -69842118 + L2 LINE L2 2725 2857 -457 189 250 0 0 chr10 75747388 75747424 -69841864 - L2 LINE L2 -27 3245 3210 * 496 294 108 19 chr10 75747394 75747608 -69841680 - MIR SINE MIR -27 235 3 55 0 0 0 chr10 75747999 75748054 -69841234 + AT_rich Low_complexity Low_complexity 1 55 0 759 262 10 0 chr10 75749159 75749365 -69839923 + L1ME LINE L1 5574 5781 -381 511 131 4 186 chr10 75749387 75749623 -69839665 - L1MC5 LINE L1 -1041 6920 6728 326 208 20 81 chr10 75749671 75749820 -69839468 + L1MEd LINE L1 1011 1150 -4969 3958 111 85 103 chr10 75749944 75751391 -69837897 + pTR5 LTR ERV1 66 2438 0 1982 150 0 7 chr10 75751464 75751770 -69837518 - AluJb SINE Alu -8 304 1 198 0 0 0 chr10 75751773 75751795 -69837493 + (T)n Simple_repeat Simple_repeat 1 22 0 503 275 79 79 chr10 75751843 75752298 -69836990 - L1MEd LINE L1 -5273 846 392 240 269 236 6 chr10 75752656 75752838 -69836450 - L3 LINE CR1 -295 1282 1059 1914 165 0 0 chr10 75754591 75754894 -69834394 + AluJb SINE Alu 3 305 -7 237 286 0 16 chr10 75755500 75755563 -69833725 + MIR SINE MIR 83 144 -64 23 0 0 0 chr10 75755670 75755693 -69833595 + AT_rich Low_complexity Low_complexity 1 23 0 2171 118 3 0 chr10 75755765 75756062 -69833226 + AluSx SINE Alu 1 298 -14 376 301 78 0 chr10 75756065 75756168 -69833120 - L2 LINE L2 -23 3249 3139 1994 132 0 33 chr10 75758701 75759005 -69830283 + AluJb SINE Alu 3 296 -16 208 345 94 35 chr10 75759122 75759308 -69829980 - MIR SINE MIR -68 140 5 895 199 74 0 chr10 75762382 75762558 -69826730 - MER5A DNA MER1_type 0 189 1 1740 158 0 50 chr10 75762783 75762926 -69826362 + AluJo SINE Alu 1 150 -159 2456 81 7 0 chr10 75762926 75763235 -69826053 + AluSp SINE Alu 1 311 -2 1740 158 0 50 chr10 75763235 75763415 -69825873 + AluJo SINE Alu 150 309 0 198 311 0 33 chr10 75763720 75763781 -69825507 - MIR3 SINE MIR -48 160 102 188 139 0 56 chr10 75764897 75764933 -69824355 + L3 LINE CR1 1468 1501 -76 200 279 44 96 chr10 75765213 75765349 -69823939 + MIR SINE MIR 84 212 -50 2261 82 9 38 chr10 75766291 75766607 -69822681 - AluSq SINE Alu -6 307 1 225 0 0 0 chr10 75767862 75767887 -69821401 + (TG)n Simple_repeat Simple_repeat 2 26 0 1758 169 7 7 chr10 75769741 75770020 -69819268 - AluJb SINE Alu -19 293 15 1651 226 88 20 chr10 75770796 75771283 -69818005 - MLT2B1 LTR ERVL 0 520 1 1261 130 93 0 chr10 75771299 75771514 -69817774 - MER46A DNA MER2_type -1 235 1 184 260 94 94 chr10 75771849 75771945 -69817343 + L2 LINE L2 3208 3303 -10 2132 71 0 4 chr10 75772962 75773228 -69816060 - AluY SINE Alu -9 302 38 319 348 62 6 chr10 75773276 75773454 -69815834 - L1ME LINE L1 -550 5571 5384 180 191 48 0 chr10 75774915 75774957 -69814331 - MIR SINE MIR -70 138 95 189 0 0 0 chr10 75776402 75776423 -69812865 + (CCCCCG)n Simple_repeat Simple_repeat 3 23 0 29 70 0 0 chr10 75777053 75777110 -69812178 + GC_rich Low_complexity Low_complexity 1 57 0 180 170 43 0 chr10 75777247 75777294 -69811994 + MIR SINE MIR 48 96 -166 2496 235 101 29 chr10 75777325 75778690 -69810598 - L1ME1 LINE L1 -2 6164 4693 436 340 77 72 chr10 75778696 75779058 -69810230 - L1ME2 LINE L1 -220 5944 5709 245 252 2 37 chr10 75779160 75779256 -69810032 + L1ME LINE L1 5579 5652 -514 351 240 0 13 chr10 75779403 75779478 -69809810 - LTR28 LTR ERV1 0 1020 947 2692 189 68 25 chr10 75779528 75780328 -69808960 - LTR28 LTR ERV1 -70 950 1 318 288 50 50 chr10 75780331 75780802 -69808486 - L1ME2 LINE L1 -738 5432 4961 511 247 6 57 chr10 75780804 75780935 -69808353 + MLT1F LTR MaLR 8 131 -411 1448 162 94 4 chr10 75780935 75781201 -69808087 - AluJo SINE Alu -22 290 1 511 247 6 57 chr10 75781201 75781227 -69808061 + MLT1F LTR MaLR 131 157 -385 548 210 215 5 chr10 75781251 75781446 -69807842 + MLT1F LTR MaLR 304 539 -3 1492 287 99 31 chr10 75781578 75782377 -69806911 + L1MCc LINE L1 24 876 -5547 577 271 20 23 chr10 75782453 75782649 -69806639 + L1ME3A LINE L1 5378 5566 -600 870 233 125 8 chr10 75782712 75782952 -69806336 - MLT1C LTR MaLR 0 467 200 474 196 133 95 chr10 75783196 75783557 -69805731 + L1ME3A LINE L1 5557 5735 -435 2218 104 0 0 chr10 75783557 75783837 -69805451 - AluSq SINE Alu -33 280 1 474 196 133 95 chr10 75783837 75784286 -69805002 + L1ME3A LINE L1 5735 6165 -5 729 281 167 36 chr10 75785210 75785570 -69803718 - MLT1I LTR MaLR -2 407 1 2769 242 147 42 chr10 75785868 75786404 -69802884 - MER69B DNA AcHobo -1300 1226 748 1850 166 0 0 chr10 75786404 75786681 -69802607 + AluSx SINE Alu 23 299 -13 2769 242 147 42 chr10 75786681 75787253 -69802035 - MER69B DNA AcHobo -1778 748 1 670 268 31 5 chr10 75787749 75787943 -69801345 + MIR SINE MIR 25 223 -39 633 304 128 4 chr10 75787974 75788247 -69801041 + LTR16C LTR ERVL 71 377 -114 1276 299 74 41 chr10 75788268 75789310 -69799978 - L1M4 LINE L1 -824 5322 4247 317 270 77 51 chr10 75789311 75789507 -69799781 + L3 LINE CR1 1373 1573 -4 197 62 0 31 chr10 75789572 75789604 -69799684 + (TTCC)n Simple_repeat Simple_repeat 4 34 0 746 211 77 34 chr10 75790315 75790523 -69798765 + MER20 DNA MER1_type 3 219 0 1265 165 33 80 chr10 75790532 75790608 -69798680 - Charlie5 DNA MER1_type -1 2623 2545 2249 99 7 0 chr10 75790608 75790900 -69798388 - AluSp SINE Alu -19 294 1 1265 165 33 80 chr10 75790900 75791187 -69798101 - Charlie5 DNA MER1_type -79 2545 2277 566 213 16 0 chr10 75791200 75791327 -69797961 - MER3 DNA MER1_type -87 122 41 496 258 103 26 chr10 75792661 75792894 -69796394 - L1MC5 LINE L1 -49 7912 7662 2252 80 59 0 chr10 75792908 75793197 -69796091 - AluY SINE Alu -5 306 1 461 253 130 0 chr10 75793426 75793588 -69795700 - MIR SINE MIR -16 246 64 270 254 132 0 chr10 75794255 75794369 -69794919 - MIR SINE MIR -63 145 17 191 322 0 35 chr10 75794514 75794601 -69794687 - MIR3 SINE MIR -21 187 104 448 190 82 23 chr10 75794897 75795033 -69794255 + MIR SINE MIR 15 121 -87 258 342 0 0 chr10 75795134 75795210 -69794078 + MIR SINE MIR 48 123 -85 194 319 42 34 chr10 75795552 75795671 -69793617 - MIR3 SINE MIR -74 134 15 * 226 318 16 40 chr10 75795602 75795728 -69793560 + MIR3 SINE MIR 12 134 -74 389 281 62 0 chr10 75796778 75796938 -69792350 + MLT1K LTR MaLR 2 171 -417 599 264 141 22 chr10 75796966 75797242 -69792046 + MLT1K LTR MaLR 274 582 -6 293 290 74 34 chr10 75797301 75797477 -69791811 + L2 LINE L2 2192 2374 -940 330 96 41 0 chr10 75797509 75797582 -69791706 + CT-rich Low_complexity Low_complexity 2 77 0 360 0 0 0 chr10 75797616 75797656 -69791632 + (TCCA)n Simple_repeat Simple_repeat 1 40 0 299 190 63 13 chr10 75797711 75797790 -69791498 - MIR SINE MIR 0 262 180 405 229 176 0 chr10 75797821 75797952 -69791336 - MIR SINE MIR -53 209 56 243 350 21 0 chr10 75798247 75798344 -69790944 + L2 LINE L2 3169 3267 -5 2515 134 37 0 chr10 75798730 75799134 -69790154 - MSTB LTR MaLR 0 426 8 456 256 128 29 chr10 75799587 75799899 -69789389 + LTR16B LTR ERVL 54 396 -68 324 319 110 6 chr10 75800267 75800430 -69788858 - MIR3 SINE MIR -15 193 14 2806 69 5 8 chr10 75800689 75801064 -69788224 - THE1C LTR MaLR 0 375 2 325 297 165 6 chr10 75801282 75801464 -69787824 + MIR SINE MIR 20 230 -32 302 324 15 0 chr10 75801708 75801920 -69787368 + GA-rich Low_complexity Low_complexity 1 215 0 372 77 0 0 chr10 75801953 75802005 -69787283 + (GA)n Simple_repeat Simple_repeat 1 52 0 306 284 45 22 chr10 75803044 75803178 -69786110 + MIR3 SINE MIR 46 182 -26 268 325 48 8 chr10 75803341 75803467 -69785821 - MIR3 SINE MIR -37 171 41 201 351 105 9 chr10 75804229 75804343 -69784945 + L2 LINE L2 2937 3061 -211 228 269 143 17 chr10 75804385 75804504 -69784784 + MER117 DNA MER1_type 30 163 -34 237 282 35 12 chr10 75805041 75805126 -69784162 - MIR SINE MIR -107 155 69 288 345 0 0 chr10 75805234 75805350 -69783938 - MIR3 SINE MIR -12 196 81 189 107 0 0 chr10 75805756 75805784 -69783504 + (TCC)n Simple_repeat Simple_repeat 2 29 0 210 328 90 30 chr10 75806708 75806842 -69782446 - MIR SINE MIR -78 184 43 191 205 0 0 chr10 75808184 75808223 -69781065 + MIR SINE MIR 108 146 -116 251 159 0 0 chr10 75808544 75808588 -69780700 + MIR SINE MIR 109 152 -110 2144 107 7 0 chr10 75808597 75808878 -69780410 + AluSq SINE Alu 5 287 -26 186 207 35 52 chr10 75809286 75809344 -69779944 + L2 LINE L2 2613 2669 -645 2940 260 11 22 chr10 75809402 75810303 -69778985 - L1ME3 LINE L1 -13 6149 5259 204 298 99 41 chr10 75810406 75810527 -69778761 + L2 LINE L2 2924 3051 -221 266 306 0 0 chr10 75810729 75810801 -69778487 - MER94 DNA DNA -11 123 52 339 312 38 19 chr10 75810833 75811029 -69778259 + MIR SINE MIR 4 202 -60 1472 162 44 14 chr10 75811279 75811575 -69777713 - L1MA9 LINE L1 0 6312 6008 30 27 0 0 chr10 75811578 75811615 -69777673 + AT_rich Low_complexity Low_complexity 1 37 0 930 178 0 44 chr10 75811615 75811781 -69777507 - AluJb SINE Alu -18 294 135 2387 94 3 0 chr10 75811781 75812080 -69777208 - AluSp SINE Alu -13 300 1 930 178 0 44 chr10 75812080 75812093 -69777195 - AluJb SINE Alu -177 135 123 280 336 16 33 chr10 75812415 75812537 -69776751 - MIR3 SINE MIR -18 190 71 666 220 81 0 chr10 75812748 75812934 -69776354 - MER63A DNA MER1_type -8 202 2 24 53 0 0 chr10 75813022 75813060 -69776228 + AT_rich Low_complexity Low_complexity 1 38 0 186 290 16 32 chr10 75813698 75813760 -69775528 - L2 LINE L2 -1071 2243 2183 321 147 15 0 chr10 75814644 75814712 -69774576 - MER53 DNA DNA -84 105 37 201 229 0 71 chr10 75815414 75815484 -69773804 - MIR3 SINE MIR -33 175 111 240 247 182 0 chr10 75816181 75816258 -69773030 - L2 LINE L2 -1 3312 3222 245 347 146 0 chr10 75817390 75817534 -69771754 + L2 LINE L2 3108 3272 0 239 258 65 0 chr10 75818302 75818364 -69770924 - MIR SINE MIR -80 182 117 222 62 0 0 chr10 75818375 75818407 -69770881 + (TTCA)n Simple_repeat Simple_repeat 4 35 0 207 255 147 39 chr10 75818980 75819082 -69770206 - MIR SINE MIR -31 231 119 356 346 30 0 chr10 75819224 75819357 -69769931 + MIR SINE MIR 103 239 -23 220 281 70 0 chr10 75819524 75819581 -69769707 + MIR SINE MIR 81 141 -67 242 292 0 0 chr10 75820198 75820263 -69769025 + MIR3 SINE MIR 90 154 -54 274 322 144 23 chr10 75820727 75820901 -69768387 - MIR SINE MIR -7 255 61 348 298 11 0 chr10 75821372 75821466 -69767822 + MIR3 SINE MIR 64 158 -50 190 261 148 43 chr10 75821496 75821611 -69767677 - MER5B DNA MER1_type -50 128 2 513 320 131 6 chr10 75821898 75822210 -69767078 + L2 LINE L2 2473 2823 -491 331 300 100 87 chr10 75822353 75822723 -69766565 + L3 LINE CR1 1191 1565 -12 603 246 0 0 chr10 75822780 75822894 -69766394 + MER81 DNA DNA 1 114 0 202 192 19 144 chr10 75823127 75823231 -69766057 + MIR3 SINE MIR 101 191 -17 460 156 39 0 chr10 75825263 75825340 -69763948 - AluJo SINE Alu -175 137 58 187 338 0 0 chr10 75825520 75825588 -69763700 - L2 LINE L2 -213 3059 2992 203 0 37 0 chr10 75825708 75825735 -69763553 + (GGA)n Simple_repeat Simple_repeat 2 29 0 194 283 221 0 chr10 75825898 75826011 -69763277 - L2 LINE L2 -1397 1917 1780 301 224 129 61 chr10 75826212 75826359 -69762929 + MIR SINE MIR 35 191 -71 602 368 227 5 chr10 75827502 75828078 -69761210 + L3 LINE CR1 682 1385 -192 236 305 80 73 chr10 75828365 75828516 -69760772 + L3 LINE CR1 1415 1566 -11 272 301 32 38 chr10 75830425 75830589 -69758699 - MIR3 SINE MIR -54 154 17 432 0 0 0 chr10 75831138 75831186 -69758102 + (TG)n Simple_repeat Simple_repeat 2 49 0 346 246 127 16 chr10 75831238 75831364 -69757924 + L2 LINE L2 3133 3272 0 196 296 102 37 chr10 75831355 75831463 -69757825 + MIR3 SINE MIR 2 116 -92 * 356 263 57 16 chr10 75832239 75832420 -69756868 - MIR3 SINE MIR -63 145 9 221 366 0 0 chr10 75833113 75833184 -69756104 + L2 LINE L2 3241 3311 -2 264 275 66 0 chr10 75833588 75833679 -69755609 + MIR3 SINE MIR 63 159 -49 389 283 101 61 chr10 75833747 75833945 -69755343 - MIR SINE MIR -44 218 13 217 328 250 0 chr10 75834201 75834317 -69754971 - L2 LINE L2 -2 3270 3126 223 364 7 46 chr10 75834442 75834593 -69754695 - L2 LINE L2 -213 3059 2915 912 259 92 11 chr10 75834714 75835115 -69754173 - LTR16C LTR ERVL -4 487 1 755 300 25 4 chr10 75835290 75835533 -69753755 + MIR SINE MIR 15 262 0 1851 151 21 0 chr10 75835661 75835943 -69753345 + AluSx SINE Alu 1 291 -21 495 0 0 0 chr10 75835943 75835998 -69753290 + (TATAA)n Simple_repeat Simple_repeat 2 56 0 23 0 0 0 chr10 75836310 75836333 -69752955 + AT_rich Low_complexity Low_complexity 1 23 0 854 165 0 0 chr10 75836393 75836526 -69752762 - FLAM_C SINE Alu 0 133 1 246 247 0 82 chr10 75836564 75836649 -69752639 + MIR SINE MIR 120 197 -65 325 345 18 0 chr10 75838998 75839111 -69750177 + MIR3 SINE MIR 82 196 -12 420 242 158 36 chr10 75840571 75840736 -69748552 - MIR3 SINE MIR -23 185 1 377 333 8 0 chr10 75841269 75841398 -69747890 - MIR3 SINE MIR -13 195 66 309 337 11 72 chr10 75842114 75842295 -69746993 - MIR SINE MIR -25 237 68 294 262 214 0 chr10 75842313 75842397 -69746891 - L2 LINE L2 -10 3262 3161 354 247 72 0 chr10 75843353 75843450 -69745838 - MIR3 SINE MIR -24 184 81 435 292 122 54 chr10 75843609 75843945 -69745343 + L2 LINE L2 2912 3270 -2 566 271 92 84 chr10 75844027 75844407 -69744881 + MLT1J2 LTR MaLR 68 450 0 276 366 74 5 chr10 75845574 75845776 -69743512 + L2 LINE L2 2830 3045 -227 2259 182 47 105 chr10 75845780 75846444 -69742844 + MLT1E2 LTR MaLR 2 626 0 700 250 53 29 chr10 75846460 75846607 -69742681 + MLT1G LTR MaLR 15 157 -433 2245 85 0 0 chr10 75846607 75846917 -69742371 + AluSx SINE Alu 1 310 0 700 250 53 29 chr10 75846917 75847241 -69742047 + MLT1G LTR MaLR 157 587 -3 283 243 65 75 chr10 75848288 75848395 -69740893 - MIR SINE MIR -67 141 36 467 339 54 14 chr10 75848425 75848646 -69740642 - L3 LINE CR1 -10 1567 1338 337 215 9 28 chr10 75848723 75849157 -69740131 + (TG)n Simple_repeat Simple_repeat 1 426 0 603 214 0 2 chr10 75849231 75849662 -69739626 + (TG)n Simple_repeat Simple_repeat 1 429 0 182 160 32 32 chr10 75850389 75850483 -69738805 + (CAGAGA)n Simple_repeat Simple_repeat 6 99 0 2474 161 29 7 chr10 75850691 75851106 -69738182 - MSTB LTR MaLR -2 424 1 185 280 40 27 chr10 75851802 75851877 -69737411 - L3b LINE CR1 -153 1430 1355 527 278 153 5 chr10 75852094 75852303 -69736985 + MIR SINE MIR 22 261 -1 192 125 0 0 chr10 75853266 75853298 -69735990 + (TC)n Simple_repeat Simple_repeat 2 33 0 504 283 22 0 chr10 75853547 75853685 -69735603 + MIR3 SINE MIR 47 187 -21 573 212 7 29 chr10 75853729 75853866 -69735422 + L2 LINE L2 3179 3312 -1 510 294 78 67 chr10 75854328 75854798 -69734490 + L1ME LINE L1 5321 5824 -297 389 292 168 0 chr10 75856075 75856212 -69733076 - MIR SINE MIR -95 167 8 * 560 236 14 144 chr10 75856148 75856365 -69732923 + MIR SINE MIR 14 187 -75 395 169 0 0 chr10 75856365 75856430 -69732858 - L1PB4 LINE L1 -13 6143 6079 560 236 14 144 chr10 75856430 75856496 -69732792 + MIR SINE MIR 187 260 -2 296 305 98 78 chr10 75856568 75856863 -69732425 - L2 LINE L2 -19 3253 2953 195 328 16 0 chr10 75857430 75857494 -69731794 + MIR SINE MIR 70 134 -128 254 296 68 0 chr10 75857515 75857603 -69731685 - MER94 DNA DNA -40 94 1 1785 141 57 10 chr10 75857843 75858141 -69731147 + AluSx SINE Alu 1 312 0 570 278 30 15 chr10 75858381 75858579 -69730709 - MER63A DNA MER1_type -8 202 2 2249 84 0 10 chr10 75859591 75859908 -69729380 + AluY SINE Alu 3 311 0 330 341 40 0 chr10 75859984 75860110 -69729178 - L1ME3A LINE L1 0 6170 6040 1159 297 63 10 chr10 75860161 75860649 -69728639 - L1ME3A LINE L1 -213 5957 5444 298 266 78 47 chr10 75861062 75861190 -69728098 + L3 LINE CR1 929 1060 -517 620 355 59 14 chr10 75861291 75861850 -69727438 - L2 LINE L2 -16 3297 2720 400 307 82 34 chr10 75861949 75862304 -69726984 + LTR16C LTR ERVL 99 470 -21 338 296 142 9 chr10 75862346 75862572 -69726716 - L2 LINE L2 -630 2684 2429 716 190 25 78 chr10 75862792 75863034 -69726254 + Charlie5 DNA MER1_type 2357 2585 -27 190 276 35 0 chr10 75863247 75863305 -69725983 + L3 LINE CR1 1513 1572 -5 2866 92 24 86 chr10 75864109 75864612 -69724676 - MER41A LTR ERV1 0 554 83 1176 90 22 0 chr10 75864620 75864798 -69724490 - MER41B LTR ERV1 -453 182 1 185 205 128 26 chr10 75864922 75865000 -69724288 + MIR SINE MIR 69 154 -108 2581 103 59 7 chr10 75865010 75865417 -69723871 + MSTA LTR MaLR 1 428 0 294 235 15 0 chr10 75865426 75865494 -69723794 - LTR67 LTR ERVL -10 547 479 654 246 115 20 chr10 75865671 75865923 -69723365 + LTR33 LTR ERVL 235 510 -11 218 333 13 27 chr10 75866225 75866300 -69722988 + MIR SINE MIR 189 262 0 359 308 10 0 chr10 75866536 75866640 -69722648 - L2 LINE L2 -1 3312 3208 304 288 91 35 chr10 75867474 75867672 -69721616 - LTR16A1 LTR ERVL -13 444 236 330 286 128 15 chr10 75868976 75869109 -69720179 - MIR SINE MIR -113 149 2 1110 239 7 34 chr10 75869194 75869491 -69719797 - L1ME4a LINE L1 -185 5936 5648 21 0 0 0 chr10 75869585 75869606 -69719682 + AT_rich Low_complexity Low_complexity 1 21 0 294 317 32 8 chr10 75869638 75869761 -69719527 + MIR3 SINE MIR 59 184 -24 190 341 59 44 chr10 75870344 75870664 -69718624 - L2 LINE L2 -25 3288 2964 210 37 0 0 chr10 75871207 75871234 -69718054 + (CA)n Simple_repeat Simple_repeat 2 28 0 201 349 53 15 chr10 75871439 75871571 -69717717 - MIR3 SINE MIR -61 147 11 1251 238 94 24 chr10 75873405 75873879 -69715409 + L1ME3 LINE L1 5569 6071 -91 852 254 0 32 chr10 75874247 75874464 -69714824 + MER63A DNA MER1_type 1 210 0 243 171 214 14 chr10 75875026 75875096 -69714192 + LTR33 LTR ERVL 434 517 -4 574 266 85 0 chr10 75875103 75875280 -69714008 + L3 LINE CR1 1371 1562 -15 205 121 0 0 chr10 75875595 75875628 -69713660 - MIR SINE MIR -64 144 112 314 313 92 29 chr10 75875841 75876061 -69713227 + MIR SINE MIR 2 243 -19 6210 217 72 11 chr10 75876095 75878487 -69710801 - L1ME2 LINE L1 -9 6224 3684 1013 327 66 42 chr10 75878502 75879258 -69710030 - L1ME2 LINE L1 -5581 815 59 2156 156 43 21 chr10 75879465 75879888 -69709400 - MSTB1 LTR MaLR 0 432 1 493 255 14 113 chr10 75880006 75880218 -69709070 - MIR SINE MIR -9 253 63 378 260 98 40 chr10 75881127 75881300 -69707988 - MIR SINE MIR 0 262 80 776 245 27 0 chr10 75882572 75882756 -69706532 - MIR SINE MIR 0 262 74 203 219 156 16 chr10 75883641 75883705 -69705583 + MIR3 SINE MIR 87 159 -49 282 216 0 0 chr10 75884008 75884059 -69705229 + L2 LINE L2 3220 3270 -2 262 287 181 16 chr10 75884280 75884468 -69704820 - MIR SINE MIR -35 227 9 234 206 153 6 chr10 75884585 75884698 -69704590 - MIR SINE MIR -56 152 18 209 278 28 0 chr10 75884853 75884925 -69704363 - MIR SINE MIR -56 152 79 249 265 196 0 chr10 75885245 75885396 -69703892 - MIR SINE MIR -6 256 62 225 281 178 14 chr10 75885592 75885783 -69703505 + MIR SINE MIR 26 243 -19 313 303 19 31 chr10 75885991 75886153 -69703135 + (CA)n Simple_repeat Simple_repeat 2 161 0 253 236 16 57 chr10 75886665 75886788 -69702500 + (TCTCTG)n Simple_repeat Simple_repeat 3 120 0 236 296 0 0 chr10 75887075 75887129 -69702159 - MER91A DNA MER1_type -139 57 4 429 204 0 0 chr10 75888698 75888850 -69700438 + (CA)n Simple_repeat Simple_repeat 1 152 0 199 304 76 13 chr10 75888951 75889030 -69700258 + MER5B DNA MER1_type 67 150 -28 214 335 165 6 chr10 75889101 75889259 -69700029 - L3 LINE CR1 -60 1517 1335 245 348 0 26 chr10 75889504 75889619 -69699669 - MIR SINE MIR 0 262 151 300 111 0 0 chr10 75889636 75889681 -69699607 + (TG)n Simple_repeat Simple_repeat 2 46 0 422 205 200 27 chr10 75889682 75889867 -69699421 - L1MC4a LINE L1 -1878 5930 5714 213 206 0 63 chr10 75890204 75890267 -69699021 + C-rich Low_complexity Low_complexity 1 59 0 205 253 121 22 chr10 75890573 75890664 -69698624 + MIR SINE MIR 25 124 -84 480 263 96 0 chr10 75891285 75891441 -69697847 + L2 LINE L2 2889 3059 -213 589 261 163 19 chr10 75892244 75892459 -69696829 + MIR SINE MIR 14 259 -3 183 346 13 13 chr10 75892530 75892608 -69696680 + L2 LINE L2 3124 3201 -71 301 331 38 0 chr10 75892978 75893115 -69696173 - MIR SINE MIR -62 146 10 1705 124 90 36 chr10 75893775 75894131 -69695157 + THE1C LTR MaLR 1 375 0 406 286 109 0 chr10 75894386 75894533 -69694755 - MIR SINE MIR -70 192 30 500 264 104 18 chr10 75894703 75894866 -69694422 + MIR SINE MIR 7 183 -79 302 336 28 66 chr10 75895132 75895343 -69693945 + MIR SINE MIR 21 223 -39 213 204 19 0 chr10 75895409 75895463 -69693825 + MIR SINE MIR 83 137 -71 298 209 29 86 chr10 75896105 75896210 -69693078 - MIR SINE MIR -57 205 107 2190 219 149 17 chr10 75896373 75897029 -69692259 + L1ME1 LINE L1 5419 6161 -5 447 231 116 0 chr10 75897421 75897542 -69691746 - MER91A DNA MER1_type -40 156 22 263 246 0 0 chr10 75897581 75897646 -69691642 + MIR SINE MIR 82 146 -62 279 191 0 0 chr10 75897740 75897808 -69691480 + (TGGA)n Simple_repeat Simple_repeat 1 68 0 449 205 8 0 chr10 75897930 75898057 -69691231 + (TGGA)n Simple_repeat Simple_repeat 4 131 0 282 296 28 28 chr10 75898699 75898841 -69690447 + MIR SINE MIR 29 170 -92 284 208 13 26 chr10 75899213 75899290 -69689998 - MIR SINE MIR -83 125 50 189 245 127 47 chr10 75900037 75900180 -69689108 - MIR3 SINE MIR -62 146 4 2381 122 59 28 chr10 75901658 75902176 -69687112 + MLT2A2 LTR ERVL 1 554 0 354 330 69 45 chr10 75902185 75902476 -69686812 + L2 LINE L2 3005 3302 -11 285 29 0 0 chr10 75902481 75902515 -69686773 + (TGAA)n Simple_repeat Simple_repeat 4 37 0 374 318 23 32 chr10 75902862 75903079 -69686209 - HERVL LTR ERVL -1591 4063 3849 6695 213 80 10 chr10 75903082 75904522 -69684766 + MLT1A1-int LTR MaLR 195 1735 0 755 181 14 100 chr10 75904522 75904615 -69684673 + MLT1A1 LTR MaLR 1 68 -297 2407 83 20 0 chr10 75904615 75904917 -69684371 + AluY SINE Alu 1 308 -3 755 181 14 100 chr10 75904917 75905033 -69684255 + MLT1A1 LTR MaLR 68 192 -173 29603 69 4 2 chr10 75905141 75908965 -69680323 - HERVL-A2 LTR ERVL -376 5278 1446 1103 110 7 0 chr10 75908968 75909122 -69680166 - HERVL-A2 LTR ERVL -4709 945 791 10857 61 20 3 chr10 75909122 75910544 -69678744 - HERVL-A2 LTR ERVL -4209 1445 1 310 51 0 0 chr10 75910544 75910583 -69678705 - MLT2A2 LTR ERVL 0 453 415 194 0 0 37 chr10 75910584 75910611 -69678677 + (TA)n Simple_repeat Simple_repeat 2 27 0 333 236 75 67 chr10 75910631 75910936 -69678352 + L1MC4 LINE L1 6550 7742 -219 32 0 0 0 chr10 75910936 75910968 -69678320 + AT_rich Low_complexity Low_complexity 1 32 0 1786 127 54 10 chr10 75911068 75911382 -69677906 - HERVL-A1 LTR ERVL -5326 328 1 357 102 0 31 chr10 75911382 75911461 -69677827 - MLT2A1 LTR ERVL 0 444 390 291 171 29 0 chr10 75911464 75911569 -69677719 + (TA)n Simple_repeat Simple_repeat 2 109 0 304 277 42 84 chr10 75911578 75911744 -69677544 - L1MCa LINE L1 -4362 2064 1906 310 327 0 40 chr10 75911618 75911719 -69677569 + L1MC4 LINE L1 6607 6703 -1339 361 306 56 9 chr10 75911766 75911874 -69677414 - L1MC4 LINE L1 -1335 6707 6595 257 135 45 0 chr10 75911885 75911974 -69677314 + (TA)n Simple_repeat Simple_repeat 2 94 0 309 296 41 20 chr10 75911974 75912072 -69677216 + L1MC4 LINE L1 6604 6703 -1339 2548 115 26 5 chr10 75912092 75912483 -69676805 - MLT2A1 LTR ERVL -45 399 1 235 228 0 0 chr10 75912484 75912541 -69676747 + L1ME1 LINE L1 5369 5425 -934 1932 173 3 0 chr10 75912542 75912848 -69676440 + AluJo SINE Alu 1 307 -5 1714 194 33 41 chr10 75912867 75913233 -69676055 + MSTD LTR MaLR 27 389 -7 2165 251 39 17 chr10 75913234 75913883 -69675405 + L1ME1 LINE L1 5449 6111 -55 433 183 0 0 chr10 75913881 75913985 -69675303 + L1MA9 LINE L1 6209 6312 0 * 193 208 28 14 chr10 75914240 75914312 -69674976 + CT-rich Low_complexity Low_complexity 3 75 0 246 348 116 0 chr10 75914449 75914561 -69674727 - MIR3 SINE MIR -45 163 39 1018 236 142 34 chr10 75915325 75915740 -69673548 + MLT1D LTR MaLR 41 500 -5 394 336 92 55 chr10 75915996 75916381 -69672907 + L1MB8 LINE L1 5666 6004 -174 458 285 146 0 chr10 75916393 75916551 -69672737 - MER5A DNA MER1_type 0 189 9 321 317 49 12 chr10 75916592 75916756 -69672532 + MER5B DNA MER1_type 5 174 -4 1998 138 0 3 chr10 75916964 75917260 -69672028 + AluJb SINE Alu 1 295 -17 317 305 18 0 chr10 75917655 75917822 -69671466 + (CAGT)n Simple_repeat Simple_repeat 2 171 0 213 65 0 0 chr10 75918034 75918065 -69671223 + (TCTG)n Simple_repeat Simple_repeat 3 33 0 201 74 0 0 chr10 75918755 75918782 -69670506 + (TG)n Simple_repeat Simple_repeat 2 28 0 253 368 32 39 chr10 75919035 75919190 -69670098 + MIR3 SINE MIR 47 200 -8 300 346 19 0 chr10 75919802 75919906 -69669382 - MIR SINE MIR -110 152 47 791 257 121 27 chr10 75919925 75920298 -69668990 - MLT1H LTR MaLR -4 545 138 535 318 113 33 chr10 75920448 75920750 -69668538 + L3 LINE CR1 1225 1550 -27 324 120 0 0 chr10 75921528 75921578 -69667710 + (ATG)n Simple_repeat Simple_repeat 1 50 0 551 96 0 0 chr10 75921589 75921662 -69667626 - Alu SINE Alu -18 292 220 544 305 57 38 chr10 75921664 75921874 -69667414 + MIR SINE MIR 30 243 -19 233 340 30 0 chr10 75922897 75922997 -69666291 - MIR SINE MIR -113 149 47 3942 27 0 0 chr10 75923093 75923544 -69665744 + L1PA3 LINE L1 5702 6152 -3 265 153 14 69 chr10 75923593 75923665 -69665623 + L3 LINE CR1 1407 1474 -103 268 242 111 10 chr10 75923973 75924072 -69665216 - MIR SINE MIR -69 139 31 818 215 81 0 chr10 75924077 75924249 -69665039 + MER5A DNA MER1_type 1 186 -3 254 296 41 41 chr10 75924417 75924515 -69664773 - MIR SINE MIR -87 121 24 518 300 100 18 chr10 75925036 75925256 -69664032 - MIR SINE MIR -2 260 23 205 244 207 37 chr10 75925399 75925481 -69663807 + MIR SINE MIR 22 117 -145 726 194 55 0 chr10 75925548 75925713 -69663575 + MIR SINE MIR 85 258 -4 1658 160 24 113 chr10 75925788 75925942 -69663346 + MER7A DNA MER2_type 2 168 -2870 2218 80 0 52 chr10 75925942 75926266 -69663022 - AluY SINE Alu -4 307 1 1658 160 24 113 chr10 75926266 75926492 -69662796 + MER7A DNA MER2_type 168 346 0 314 297 24 85 chr10 75926548 75926713 -69662575 + MIR3 SINE MIR 6 160 -48 566 286 67 9 chr10 75928895 75929119 -69660169 + LTR16C LTR ERVL 255 491 0 315 104 0 0 chr10 75929441 75929489 -69659799 + (TG)n Simple_repeat Simple_repeat 2 49 0 391 302 59 12 chr10 75930158 75930327 -69658961 - MIR3 SINE MIR -28 180 4 1172 234 93 28 chr10 75930591 75931023 -69658265 + MLT1C LTR MaLR 6 465 -2 382 318 9 0 chr10 75931574 75931684 -69657604 - MIR3 SINE MIR -40 168 58 277 356 89 0 chr10 75932069 75932170 -69657118 + MIR3 SINE MIR 50 159 -49 335 221 81 0 chr10 75932377 75932463 -69656825 - MIR SINE MIR -74 188 96 358 260 56 64 chr10 75933308 75933460 -69655828 + MIR SINE MIR 35 181 -58 214 350 58 0 chr10 75934291 75934411 -69654877 + L3b LINE CR1 1268 1394 -189 720 276 102 13 chr10 75934538 75934929 -69654359 + LTR16A1 LTR ERVL 10 435 -22 729 326 175 5 chr10 75934955 75935534 -69653754 - L2 LINE L2 0 3313 2637 503 290 84 25 chr10 75935788 75935899 -69653389 + LTR16C LTR ERVL 240 343 -148 1958 189 31 8 chr10 75935899 75936253 -69653035 + MLT1A1 LTR MaLR 1 362 -3 503 290 84 25 chr10 75936253 75936379 -69652909 + LTR16C LTR ERVL 343 491 0 1198 293 19 36 chr10 75936381 75936585 -69652703 - L2 LINE L2 -705 2609 2403 2335 82 3 9 chr10 75936585 75936900 -69652388 + AluSq SINE Alu 1 313 0 1198 293 19 36 chr10 75936900 75937170 -69652118 - L2 LINE L2 -911 2403 2143 478 288 32 0 chr10 75937313 75937438 -69651850 - MER91C DNA MER1_type 0 140 12 366 329 37 19 chr10 75937532 75937693 -69651595 - L2 LINE L2 -251 3062 2899 193 295 39 26 chr10 75937778 75937856 -69651432 - MIR SINE MIR -141 121 43 399 194 0 0 chr10 75938335 75938438 -69650850 + (CA)n Simple_repeat Simple_repeat 2 104 0 654 312 21 66 chr10 75938438 75938771 -69650517 + L2 LINE L2 2939 3256 -16 332 318 143 37 chr10 75940015 75940163 -69649125 - MIR SINE MIR -8 254 87 350 274 114 46 chr10 75940163 75940338 -69648950 + MIR SINE MIR 4 190 -72 375 283 7 40 chr10 75940683 75940802 -69648486 + MER103 DNA DNA 3 117 -49 1831 213 19 8 chr10 75940802 75941163 -69648125 + MLT1A1 LTR MaLR 1 365 0 375 283 7 40 chr10 75941163 75941195 -69648093 + MER103 DNA DNA 117 149 -17 251 198 62 62 chr10 75941489 75941585 -69647703 + MIR3 SINE MIR 82 177 -31 199 269 142 57 chr10 75942269 75942410 -69646878 + MIR3 SINE MIR 35 187 -21 206 291 18 0 chr10 75943122 75943177 -69646111 + L2 LINE L2 2414 2469 -845 196 288 51 17 chr10 75943337 75943396 -69645892 + MER5B DNA MER1_type 9 69 -109 * 335 342 205 16 chr10 75943394 75944151 -69645137 - L2 LINE L2 -346 2968 2069 302 289 11 123 chr10 75945041 75945228 -69644060 - L2 LINE L2 -200 3072 2907 648 280 80 42 chr10 75945476 75945862 -69643426 + LTR16C LTR ERVL 91 491 0 198 376 40 20 chr10 75946699 75946800 -69642488 + L2 LINE L2 3158 3260 -12 627 233 33 0 chr10 75946884 75947046 -69642242 + MIR SINE MIR 36 201 -61 264 270 45 22 chr10 75947204 75947293 -69641995 + MIR3 SINE MIR 113 203 -5 211 289 0 0 chr10 75947814 75947866 -69641422 - MIR SINE MIR -116 146 95 220 162 0 0 chr10 75948064 75948101 -69641187 - MIR SINE MIR -63 145 109 241 277 96 0 chr10 75948532 75948615 -69640673 - MER91C DNA MER1_type -21 119 29 262 329 51 36 chr10 75948734 75948871 -69640417 + MIR SINE MIR 110 248 -14 211 149 149 45 chr10 75948909 75948976 -69640312 - L2 LINE L2 -46 3226 3153 234 246 127 79 chr10 75949229 75949355 -69639933 - MIR SINE MIR -8 254 123 423 259 134 27 chr10 75949379 75949750 -69639538 - LTR33A LTR ERVL 0 523 61 1132 320 146 52 chr10 75950245 75951468 -69637820 + L2 LINE L2 1613 2949 -365 223 340 196 0 chr10 75951567 75951664 -69637624 + L2 LINE L2 3196 3311 -2 * 226 318 37 28 chr10 75951642 75951749 -69637539 - MIR SINE MIR -94 168 61 302 176 30 9 chr10 75952195 75952290 -69636998 + MIR3 SINE MIR 69 166 -42 278 287 215 27 chr10 75952785 75953008 -69636280 - L2 LINE L2 -54 3259 2995 181 288 45 0 chr10 75953388 75953454 -69635834 - MIR SINE MIR -106 102 34 443 345 10 44 chr10 75954116 75954322 -69634966 - L3 LINE CR1 -11 1566 1368 224 167 0 0 chr10 75954630 75954666 -69634622 + MIR SINE MIR 204 239 -23 492 205 131 0 chr10 75954891 75955013 -69634275 - MIR SINE MIR -111 151 14 484 186 144 0 chr10 75955940 75956058 -69633230 + MIR SINE MIR 14 148 -114 224 167 0 0 chr10 75956286 75956322 -69632966 - MIR SINE MIR -23 239 204 450 349 5 53 chr10 75956630 75956839 -69632449 + L3 LINE CR1 1368 1566 -11 384 22 0 0 chr10 75956880 75956925 -69632363 + (CA)n Simple_repeat Simple_repeat 1 45 0 612 241 78 0 chr10 75957083 75957249 -69632039 - MIR SINE MIR -70 192 14 330 285 31 0 chr10 75957460 75957575 -69631713 + MIR SINE MIR 44 161 -47 295 355 97 0 chr10 75958207 75958331 -69630957 + MIR3 SINE MIR 21 156 -52 1776 128 64 4 chr10 75958506 75958787 -69630501 - AluJb SINE Alu -14 298 1 453 349 20 0 chr10 75960049 75960198 -69629090 + MIR SINE MIR 111 262 0 555 261 164 12 chr10 75961606 75961771 -69627517 + MER91A DNA MER1_type 1 190 -6 206 322 136 8 chr10 75962074 75962192 -69627096 + L2 LINE L2 3128 3260 -12 308 302 71 16 chr10 75962288 75962414 -69626874 + MIR3 SINE MIR 29 161 -47 426 311 90 12 chr10 75963326 75963493 -69625795 - MIR SINE MIR -36 226 47 257 254 34 0 chr10 75963585 75963644 -69625644 - MIR SINE MIR -58 150 90 189 0 0 0 chr10 75963682 75963703 -69625585 + (T)n Simple_repeat Simple_repeat 1 21 0 581 138 32 0 chr10 75964153 75964247 -69625041 - L1MD3 LINE L1 -9 7986 7890 590 216 47 0 chr10 75964308 75964456 -69624832 - L1MD3 LINE L1 -469 7526 7372 403 183 14 0 chr10 75964428 75964499 -69624789 - MLT1F1 LTR MaLR -445 122 51 * 874 193 17 123 chr10 75964511 75965048 -69624240 - L1MD3 LINE L1 -678 7317 6730 2266 88 0 0 chr10 75965067 75965363 -69623925 - AluSx SINE Alu -16 296 1 197 214 71 0 chr10 75965875 75965931 -69623357 + MIR SINE MIR 93 152 -110 732 264 84 9 chr10 75965996 75966223 -69623065 + MIR SINE MIR 4 247 -15 6278 139 14 16 chr10 75966353 75966715 -69622573 - L1MC1 LINE L1 0 6333 5972 2066 80 69 0 chr10 75966715 75967004 -69622284 - AluSc SINE Alu 0 309 1 6278 139 14 16 chr10 75967004 75967673 -69621615 - L1MC1 LINE L1 -361 5972 5304 236 158 0 0 chr10 75967673 75967711 -69621577 + CT-rich Low_complexity Low_complexity 1 38 0 1163 83 14 16 chr10 75967711 75968037 -69621251 + (TTTC)n Simple_repeat Simple_repeat 1 506 0 1411 169 38 61 chr10 75968045 75968358 -69620930 - AluJb SINE Alu -6 306 1 1909 192 2 38 chr10 75968359 75968802 -69620486 - L1MC1 LINE L1 -837 5309 4883 348 321 64 0 chr10 75969820 75969960 -69619328 + MIR SINE MIR 93 241 -21 267 356 6 6 chr10 75970607 75970787 -69618501 + (CA)n Simple_repeat Simple_repeat 1 180 0 180 194 28 0 chr10 75971156 75971192 -69618096 - L2 LINE L2 -17 3255 3219 189 280 93 9 chr10 75971389 75971496 -69617792 + L2 LINE L2 2932 3047 -225 1348 146 5 0 chr10 75971757 75971976 -69617312 - AluSg/x SINE Alu -9 303 84 220 301 179 17 chr10 75972324 75972497 -69616791 - L2 LINE L2 -216 3056 2856 1397 197 125 55 chr10 75972501 75972958 -69616330 - MLT1D LTR MaLR -5 500 12 310 234 153 24 chr10 75974458 75974582 -69614706 + MIR SINE MIR 53 192 -70 1218 242 60 18 chr10 75976091 75976443 -69612845 + MLT1A2 LTR MaLR 15 374 0 234 258 113 0 chr10 75976728 75976825 -69612463 + MIR SINE MIR 33 140 -68 264 294 98 28 chr10 75977091 75977234 -69612054 + MIR3 SINE MIR 1 153 -55 188 308 25 63 chr10 75977617 75977776 -69611512 - L2 LINE L2 -216 3056 2904 420 247 38 32 chr10 75978029 75978187 -69611101 + HAL1 LINE L1 2273 2431 -76 318 309 81 40 chr10 75978542 75978765 -69610523 + MIR SINE MIR 28 259 -3 210 281 10 125 chr10 75979934 75980126 -69609162 + MIR3 SINE MIR 15 184 -24 210 289 158 21 chr10 75980429 75980619 -69608669 - L3 LINE CR1 -191 1386 1171 1711 309 133 23 chr10 75980704 75981449 -69607839 - L3 LINE CR1 -672 905 79 2224 103 0 3 chr10 75981677 75981989 -69607299 + AluSx SINE Alu 1 311 -1 643 306 185 2 chr10 75982003 75982496 -69606792 + L1MC4a LINE L1 5316 5898 -1910 219 36 0 0 chr10 75982510 75982538 -69606750 + (TG)n Simple_repeat Simple_repeat 1 28 0 3287 164 72 34 chr10 75983036 75983705 -69605583 - LTR8A LTR ERV1 0 727 34 323 313 98 12 chr10 75984715 75984878 -69604410 + MIR3 SINE MIR 9 185 -23 584 240 116 12 chr10 75985328 75985531 -69603757 + MIR SINE MIR 15 250 -12 304 237 0 0 chr10 75985580 75985639 -69603649 + MER5B DNA MER1_type 6 64 -114 21424 180 37 7 chr10 75985650 75988023 -69601265 + L1PA13 LINE L1 1 2301 -4496 2126 113 0 0 chr10 75988023 75988315 -69600973 - AluSc SINE Alu -17 292 1 21424 180 37 7 chr10 75988315 75991798 -69597490 + L1PA13 LINE L1 2301 6040 -757 255 263 42 42 chr10 75991839 75991934 -69597354 - MLT1E3 LTR MaLR -132 492 398 5018 110 25 0 chr10 75991934 75992654 -69596634 + L1PA13 LINE L1 5424 6161 -2 212 234 191 32 chr10 75992663 75992757 -69596531 + MER5B DNA MER1_type 52 160 -18 2183 131 51 26 chr10 75992757 75993108 -69596180 - THE1B LTR MaLR 0 364 5 11670 86 7 4 chr10 75993108 75994601 -69594687 - MSTB-int LTR MaLR -1 1579 82 539 149 0 35 chr10 75994629 75994716 -69594572 + FRAM SINE Alu 12 95 -81 5937 181 98 5 chr10 75994717 75995842 -69593446 - MSTB-int LTR MaLR -422 1229 1 2515 158 39 2 chr10 75995842 75996253 -69593035 - MSTB LTR MaLR 0 426 1 6544 232 52 21 chr10 75996253 75998337 -69590951 - L1ME LINE L1 -682 5553 3408 7452 188 27 20 chr10 75998338 75999937 -69589351 + L1M3f LINE L1 10 1597 -4731 2003 113 0 11 chr10 75999937 76000251 -69589037 + AluSg SINE Alu 1 311 0 7452 188 27 20 chr10 76000251 76000964 -69588324 + L1M3f LINE L1 1597 2304 -4024 1596 174 53 0 chr10 76000964 76001246 -69588042 + AluJb SINE Alu 1 297 -15 7452 188 27 20 chr10 76001246 76002879 -69586409 + L1M3f LINE L1 2304 3972 -2356 407 143 0 6 chr10 76002879 76003123 -69586165 + AluJb SINE Alu 1 296 -16 1479 202 7 7 chr10 76003134 76003411 -69585877 + LTR57 LTR ERVL 1 277 -134 * 2370 118 3 3 chr10 76003407 76003745 -69585543 - THE1A LTR MaLR -17 338 1 12048 89 10 0 chr10 76003745 76005309 -69583979 - THE1A-int LTR MaLR 0 1580 2 2736 77 8 0 chr10 76005310 76005662 -69583626 - THE1A LTR MaLR 0 355 1 632 204 0 0 chr10 76005662 76005804 -69583484 + L1MA4 LINE L1 6153 6294 -6 1105 220 54 33 chr10 76005805 76006196 -69583092 - L1ME LINE L1 -2795 3420 3022 255 105 92 53 chr10 76006205 76006220 -69583068 - L1MC2 LINE L1 0 6344 6331 2062 107 0 3 chr10 76006220 76006511 -69582777 - AluSc SINE Alu -19 290 1 255 105 92 53 chr10 76006511 76006571 -69582717 - L1MC2 LINE L1 -13 6331 6266 270 111 0 0 chr10 76006573 76006609 -69582679 - MSTB-int LTR MaLR -271 1309 1274 1260 113 0 0 chr10 76006613 76006781 -69582507 + THE1-int LTR MaLR 680 847 -733 1665 147 51 122 chr10 76006785 76007213 -69582075 - L1MC3 LINE L1 -87 7698 7301 1798 198 57 46 chr10 76007215 76007669 -69581619 + MLT1C LTR MaLR 9 467 0 462 192 0 0 chr10 76007669 76007747 -69581541 - L1MC3 LINE L1 -486 7299 7222 467 316 105 8 chr10 76008308 76008555 -69580733 - L1ME LINE L1 -346 5775 5505 369 201 38 32 chr10 76008546 76008995 -69580293 - L1ME LINE L1 -4029 2367 1855 * 413 237 7 58 chr10 76008999 76009138 -69580150 + L1MEc LINE L1 51 182 -6214 410 146 83 0 chr10 76009140 76009236 -69580052 + L1M4 LINE L1 2819 2922 -3224 961 284 0 30 chr10 76009466 76009734 -69579554 - L1ME LINE L1 -6086 310 51 4158 217 32 68 chr10 76009738 76011496 -69577792 + L1MEc LINE L1 1855 3573 -2642 2724 162 30 2 chr10 76011493 76011987 -69577301 - L1MB7 LINE L1 -31 6153 5646 * 1135 96 72 6 chr10 76011987 76012153 -69577135 - MLT2A1 LTR ERVL 0 444 268 280 355 97 0 chr10 76012323 76012447 -69576841 + MIR3 SINE MIR 21 156 -52 432 291 175 11 chr10 76019830 76020208 -69569080 + LTR67 LTR ERVL 114 553 -4 392 308 68 49 chr10 76020555 76020818 -69568470 + HERVL LTR ERVL 3020 3287 -2367 512 284 107 31 chr10 76021047 76021336 -69567952 + HERVL LTR ERVL 3630 3940 -1714 679 326 97 19 chr10 76021721 76022306 -69566982 + HERVL LTR ERVL 4419 5049 -715 230 351 32 11 chr10 76022933 76023027 -69566261 + L2 LINE L2 2615 2710 -604 1814 137 20 41 chr10 76023339 76023632 -69565656 + AluSg SINE Alu 1 287 -23 287 250 167 0 chr10 76023664 76023760 -69565528 - MIR SINE MIR -39 223 112 2659 216 17 43 chr10 76023863 76024608 -69564680 - L1M4 LINE L1 -1357 4789 4064 4614 237 50 31 chr10 76024637 76026102 -69563186 + L1MEc LINE L1 3548 5040 -1175 241 245 52 83 chr10 76026358 76026512 -69562776 - L2 LINE L2 -707 2607 2459 2120 109 20 14 chr10 76026512 76026806 -69562482 + AluSq SINE Alu 1 296 -17 241 245 52 83 chr10 76026806 76026843 -69562445 - L2 LINE L2 -855 2459 2422 914 138 12 25 chr10 76026966 76027126 -69562162 + MLT1D LTR MaLR 1 158 -347 1079 200 5 5 chr10 76027130 76027350 -69561938 + MLT1D LTR MaLR 286 505 0 1658 169 33 0 chr10 76027357 76027473 -69561815 + AluJo SINE Alu 1 112 -200 342 0 0 0 chr10 76027473 76027511 -69561777 + (CA)n Simple_repeat Simple_repeat 1 38 0 1658 169 33 0 chr10 76027511 76027667 -69561621 + AluJo SINE Alu 112 282 -30 409 280 119 6 chr10 76027740 76027908 -69561380 - L2 LINE L2 -813 2501 2315 276 289 0 0 chr10 76028979 76029055 -69560233 - MIR SINE MIR -102 160 85 2179 131 18 34 chr10 76029176 76029557 -69559731 + THE1C LTR MaLR 1 375 0 476 206 41 0 chr10 76029593 76029690 -69559598 - MER5A DNA MER1_type -80 109 9 234 222 14 97 chr10 76030066 76030127 -69559161 + MIR3 SINE MIR 103 157 -51 203 132 19 170 chr10 76030127 76030180 -69559108 - MER5B DNA MER1_type -1 177 133 3196 216 48 52 chr10 76030182 76031372 -69557916 - L1ME1 LINE L1 0 6166 4990 422 49 16 0 chr10 76031372 76031433 -69557855 + (TG)n Simple_repeat Simple_repeat 2 63 0 2087 103 21 7 chr10 76034544 76034835 -69554453 + AluSx SINE Alu 2 296 -16 309 239 138 0 chr10 76037053 76037162 -69552126 + L1MB8 LINE L1 5985 6108 -70 1520 191 40 4 chr10 76037610 76037887 -69551401 + AluJb SINE Alu 1 287 -25 192 125 0 0 chr10 76040200 76040232 -69549056 + (AGCTG)n Simple_repeat Simple_repeat 4 35 0 1170 253 135 2 chr10 76041672 76042079 -69547209 + MLT1C LTR MaLR 1 461 -6 255 133 0 0 chr10 76044699 76044744 -69544544 + (TA)n Simple_repeat Simple_repeat 1 45 0 301 292 41 11 chr10 76045424 76045547 -69543741 + MIR SINE MIR 66 149 -59 243 248 65 61 chr10 76046020 76046179 -69543109 + MIR SINE MIR 23 182 -72 353 287 23 0 chr10 76046590 76046677 -69542611 - MIR SINE MIR -94 168 80 233 114 0 0 chr10 76046801 76046836 -69542452 - MIR SINE MIR -117 145 111 231 152 0 0 chr10 76047828 76047874 -69541414 + (CA)n Simple_repeat Simple_repeat 2 47 0 204 315 160 30 chr10 76049461 76049661 -69539627 - L2 LINE L2 -664 2650 2425 2270 114 3 3 chr10 76050190 76050498 -69538790 + AluSx SINE Alu 1 308 -4 450 276 94 107 chr10 76051207 76051291 -69537997 - L2 LINE L2 -1 3271 3187 2291 98 3 0 chr10 76051291 76051588 -69537700 + AluSx SINE Alu 3 300 -12 450 276 94 107 chr10 76051588 76052060 -69537228 - L2 LINE L2 -85 3187 2723 341 293 14 14 chr10 76052086 76052233 -69537055 - LTR16C LTR ERVL 0 491 345 6918 151 73 12 chr10 76052667 76054140 -69535148 + L1PA13 LINE L1 3765 5427 -736 2189 122 3 3 chr10 76054140 76054436 -69534852 + AluSq SINE Alu 1 296 -17 6918 151 73 12 chr10 76054436 76055214 -69534074 + L1PA13 LINE L1 5427 6157 -6 214 358 125 36 chr10 76055525 76055804 -69533484 + L2 LINE L2 2223 2526 -788 314 291 54 4 chr10 76056787 76056911 -69532377 - L1M3 LINE L1 -558 5610 5486 589 233 214 11 chr10 76057239 76057501 -69531787 + MER58D DNA MER1_type 71 385 -1 1472 183 47 7 chr10 76060147 76060421 -69528867 - AluJb SINE Alu -27 285 1 786 270 59 13 chr10 76060939 76061176 -69528112 + LTR16A LTR ERVL 203 450 0 37 62 0 0 chr10 76061575 76061640 -69527648 + AT_rich Low_complexity Low_complexity 1 65 0 443 322 120 0 chr10 76062003 76062186 -69527102 - L1M4b LINE L1 -6271 588 384 688 280 212 40 chr10 76062399 76062903 -69526385 + L1MCa LINE L1 98 561 -5484 339 293 107 7 chr10 76062908 76063048 -69526240 + L1MCa LINE L1 631 784 -5261 569 216 246 8 chr10 76063113 76063377 -69525911 + L1MCa LINE L1 994 1320 -5244 410 291 224 57 chr10 76065017 76065488 -69523800 + L1MCa LINE L1 1461 2147 -4444 900 209 6 6 chr10 76069545 76069727 -69519561 - MER5A DNA MER1_type -7 182 1 270 331 45 15 chr10 76070016 76070149 -69519139 + MIR3 SINE MIR 24 160 -48 213 324 81 18 chr10 76070165 76070276 -69519012 - L2 LINE L2 -11 3302 3185 303 213 6 0 chr10 76070479 76070552 -69518736 - L1MA3 LINE L1 -5 6299 6224 192 255 0 0 chr10 76070686 76070733 -69518555 + MER5B DNA MER1_type 51 97 -81 1586 192 81 15 chr10 76071353 76071747 -69517541 - LTR56 LTR ERV1 -1 436 46 1910 97 0 0 chr10 76071749 76071987 -69517301 - AluSx SINE Alu -23 289 52 258 167 0 19 chr10 76072010 76072064 -69517224 - LTR56 LTR ERV1 -384 61 9 211 175 206 16 chr10 76072477 76072540 -69516748 + MIR SINE MIR 49 123 -85 2218 120 0 0 chr10 76073663 76073954 -69515334 + AluSx SINE Alu 2 292 -20 325 316 70 0 chr10 76073974 76074088 -69515200 + MIR SINE MIR 3 124 -138 189 214 179 0 chr10 76074133 76074189 -69515099 + MIR SINE MIR 123 188 -74 237 264 264 14 chr10 76074573 76074721 -69514567 - MIR3 SINE MIR -23 185 1 499 311 80 21 chr10 76074778 76075067 -69514221 + MER102b DNA MER1_type 14 319 -22 225 182 55 0 chr10 76075915 76075970 -69513318 + CT-rich Low_complexity Low_complexity 4 61 0 1952 132 38 0 chr10 76076158 76076445 -69512843 + AluSx SINE Alu 1 298 -14 550 234 159 0 chr10 76076549 76076694 -69512594 - MIR SINE MIR -83 179 12 514 193 44 9 chr10 76076707 76076821 -69512467 + L1ME4a LINE L1 6002 6119 -2 314 354 31 6 chr10 76077710 76077871 -69511417 + L1MC4a LINE L1 5728 5892 -1916 2088 142 0 0 chr10 76077939 76078235 -69511053 - AluSx SINE Alu -16 296 1 21 36 0 0 chr10 76078244 76078272 -69511016 + AT_rich Low_complexity Low_complexity 1 28 0 1834 168 40 0 chr10 76078509 76078806 -69510482 + AluSx SINE Alu 4 312 0 2030 145 7 0 chr10 76079059 76079363 -69509925 + AluSx SINE Alu 1 306 -6 560 183 33 0 chr10 76080848 76080968 -69508320 + Charlie5 DNA MER1_type 1 124 -2488 1044 193 69 69 chr10 76080969 76081093 -69508195 + Charlie5 DNA MER1_type 2235 2358 -266 1895 134 17 27 chr10 76081093 76081391 -69507897 + AluJo SINE Alu 1 295 -17 1044 193 69 69 chr10 76081391 76081644 -69507644 + Charlie5 DNA MER1_type 2357 2612 -12 567 330 80 34 chr10 76081644 76082069 -69507219 - L1M4 LINE L1 -2347 3799 3032 187 195 0 0 chr10 76082997 76083038 -69506250 + MIR SINE MIR 80 120 -142 2455 112 0 0 chr10 76083216 76083528 -69505760 + AluSx SINE Alu 1 312 0 320 306 82 20 chr10 76084102 76084249 -69505039 + MIR3 SINE MIR 6 161 -47 288 312 21 0 chr10 76084710 76084803 -69504485 - L2 LINE L2 -11 3302 3208 655 180 31 68 chr10 76085115 76085276 -69504012 - LTR32 LTR ERVL 0 471 317 1925 145 32 0 chr10 76085377 76085687 -69503601 - LTR32 LTR ERVL -137 334 15 538 304 54 5 chr10 76085687 76085891 -69503397 - MIR SINE MIR -35 227 14 2004 136 33 22 chr10 76086159 76086526 -69502762 + THE1C LTR MaLR 1 371 -4 685 199 31 106 chr10 76086670 76086896 -69502392 - MER63A DNA MER1_type -1 209 1 1153 277 63 58 chr10 76086896 76087490 -69501798 + L1MEc LINE L1 839 1441 -4955 2415 240 20 11 chr10 76087490 76088052 -69501236 + MLT1F1 LTR MaLR 1 567 0 1153 277 63 58 chr10 76088052 76088396 -69500892 + L1MEc LINE L1 1441 1782 -4614 2174 86 10 54 chr10 76088468 76088782 -69500506 - AluSg SINE Alu -10 300 1 1568 210 59 3 chr10 76088794 76089602 -69499686 + L1MEc LINE L1 12 880 -5516 1724 180 133 29 chr10 76089731 76089812 -69499476 + MER44D DNA MER2_type 1 72 -2415 2230 99 7 10 chr10 76089812 76090114 -69499174 + AluSx SINE Alu 1 301 -11 1724 180 133 29 chr10 76090114 76090443 -69498845 + MER44D DNA MER2_type 72 509 -96 1335 172 83 65 chr10 76090443 76090562 -69498726 + MER2 DNA MER2_type 2 117 -228 5170 135 32 19 chr10 76090562 76091473 -69497815 + MER49 LTR ERV1 1 923 0 1335 172 83 65 chr10 76091473 76091690 -69497598 + MER2 DNA MER2_type 117 344 -1 449 212 24 0 chr10 76091691 76091776 -69497512 + MER44D DNA MER2_type 519 605 0 1192 229 9 4 chr10 76091776 76092046 -69497242 + L1ME2 LINE L1 5901 6334 0 2556 171 45 17 chr10 76092378 76092819 -69496469 - MER44D DNA MER2_type -1884 603 88 1379 162 24 134 chr10 76092819 76093147 -69496141 + AluJb SINE Alu 1 292 -20 2556 171 45 17 chr10 76093147 76093238 -69496050 - MER44D DNA MER2_type -2399 88 1 183 278 74 0 chr10 76094435 76094489 -69494799 + MIR SINE MIR 72 129 -133 714 176 34 27 chr10 76094724 76094872 -69494416 - Tigger7 DNA MER2_type -584 149 1 216 345 23 0 chr10 76094930 76095017 -69494271 + MIR SINE MIR 139 227 -35 2227 183 33 68 chr10 76095033 76095607 -69493681 + MLT2B3 LTR ERVL 1 554 0 376 226 36 0 chr10 76096431 76096515 -69492773 - MER45A DNA AcHobo 0 178 92 2232 125 27 11 chr10 76096515 76096890 -69492398 + L1MC3 LINE L1 7391 7771 -14 1246 86 114 0 chr10 76097154 76097364 -69491924 + L1MB7 LINE L1 5897 6130 -54 2248 107 3 7 chr10 76097379 76097687 -69491601 - AluSx SINE Alu -5 307 1 237 118 0 0 chr10 76097695 76097729 -69491559 + MIR SINE MIR 211 244 -18 414 305 92 0 chr10 76098179 76098343 -69490945 - MIR SINE MIR -64 198 20 269 368 18 0 chr10 76098583 76098697 -69490591 - L2 LINE L2 0 3272 3157 218 300 0 0 chr10 76099720 76099790 -69489498 + (TG)n Simple_repeat Simple_repeat 1 70 0 660 236 31 0 chr10 76100223 76100384 -69488904 + MIR SINE MIR 65 230 -32 438 258 45 19 chr10 76100593 76100748 -69488540 - MIR SINE MIR -59 203 45 23 0 0 0 chr10 76101288 76101311 -69487977 + GC_rich Low_complexity Low_complexity 1 23 0 198 71 0 0 chr10 76101767 76101795 -69487493 + (CGG)n Simple_repeat Simple_repeat 2 29 0 306 0 0 0 chr10 76102542 76102576 -69486712 + (TTA)n Simple_repeat Simple_repeat 1 34 0 396 0 0 0 chr10 76102595 76102639 -69486649 + (TG)n Simple_repeat Simple_repeat 2 45 0 261 0 0 0 chr10 76104682 76104711 -69484577 + (TG)n Simple_repeat Simple_repeat 1 29 0 252 286 107 14 chr10 76104944 76105084 -69484204 - MIR3 SINE MIR -49 159 7 3459 46 21 0 chr10 76108111 76108546 -69480742 - MLT2A1 LTR ERVL 0 444 1 769 272 10 5 chr10 76109415 76109610 -69479678 + MIR SINE MIR 59 254 -8 184 234 99 117 chr10 76109708 76109819 -69479469 + MIR SINE MIR 31 139 -69 672 240 80 53 chr10 76110617 76110842 -69478446 + MIR SINE MIR 17 247 -15 279 0 0 0 chr10 76110854 76110885 -69478403 + (CAT)n Simple_repeat Simple_repeat 3 33 0 231 281 21 62 chr10 76110950 76111046 -69478242 - L2 LINE L2 -208 3064 2973 204 314 95 19 chr10 76111238 76111343 -69477945 + MIR SINE MIR 109 221 -41 230 213 0 0 chr10 76112105 76112152 -69477136 + L2 LINE L2 3267 3313 0 279 71 0 0 chr10 76113097 76113139 -69476149 + (CA)n Simple_repeat Simple_repeat 2 43 0 501 17 0 0 chr10 76113233 76113291 -69475997 + (CA)n Simple_repeat Simple_repeat 2 59 0 353 250 102 9 chr10 76113356 76113464 -69475824 + MIR SINE MIR 34 151 -57 228 250 0 0 chr10 76113471 76113515 -69475773 + MIR SINE MIR 36 79 -129 321 222 73 75 chr10 76113946 76114074 -69475214 + MIR SINE MIR 20 156 -64 2439 99 0 0 chr10 76114937 76115249 -69474039 - AluSx SINE Alu 0 312 1 427 353 34 15 chr10 76115306 76115510 -69473778 + MIR SINE MIR 28 235 -27 301 192 12 122 chr10 76115549 76115721 -69473567 + L1MC/D LINE L1 3786 3938 -2208 2469 72 11 32 chr10 76115768 76115852 -69473436 + L1PB1 LINE L1 5783 5867 -284 2482 100 0 0 chr10 76115852 76116161 -69473127 - AluSx SINE Alu -3 309 1 2469 72 11 32 chr10 76116161 76116453 -69472835 + L1PB1 LINE L1 5867 6151 0 328 265 34 41 chr10 76116453 76116574 -69472714 + L1MC3 LINE L1 1978 6926 -1139 402 74 0 0 chr10 76116574 76116628 -69472660 + (CA)n Simple_repeat Simple_repeat 2 55 0 266 320 50 33 chr10 76116634 76116815 -69472473 + L1MC/D LINE L1 4018 4201 -1945 853 325 34 30 chr10 76116818 76117596 -69471692 + L1MC/D LINE L1 4724 5504 -773 339 298 87 51 chr10 76117626 76117840 -69471448 - MIR SINE MIR -24 238 4 209 303 34 67 chr10 76118819 76118908 -69470380 - MIR SINE MIR -64 198 113 468 203 22 26 chr10 76119905 76120040 -69469248 + MIR3 SINE MIR 94 177 -31 427 315 266 3 chr10 76120203 76120489 -69468799 + L2 LINE L2 2952 3312 -1 329 297 34 17 chr10 76120532 76120650 -69468638 - MER5B DNA MER1_type -52 126 7 674 192 146 7 chr10 76120662 76120813 -69468475 - MER5B DNA MER1_type -2 176 5 213 39 0 0 chr10 76121324 76121350 -69467938 + (CCCCAG)n Simple_repeat Simple_repeat 2 27 0 289 302 132 16 chr10 76121956 76122085 -69467203 + MIR3 SINE MIR 28 171 -37 363 218 33 106 chr10 76122951 76123105 -69466183 - MIR SINE MIR -1 207 47 224 322 113 9 chr10 76123549 76123664 -69465624 - MIR SINE MIR -113 149 23 261 188 0 0 chr10 76123942 76123990 -69465298 + (TCTCTG)n Simple_repeat Simple_repeat 1 48 0 515 228 26 0 chr10 76124817 76124931 -69464357 + MIR SINE MIR 33 149 -59 186 321 173 0 chr10 76124997 76125078 -69464210 + MIR SINE MIR 161 255 -7 377 363 65 5 chr10 76126094 76126295 -69462993 + MIR SINE MIR 14 226 -36 538 276 182 0 chr10 76126300 76126492 -69462796 + MIR SINE MIR 32 258 -4 1577 109 101 4 chr10 76127353 76127601 -69461687 - AluSx SINE Alu -17 295 24 1022 149 7 0 chr10 76127661 76127815 -69461473 - FRAM SINE Alu -25 151 1 183 290 130 61 chr10 76128349 76128480 -69460808 + MIR SINE MIR 94 233 -29 489 268 51 7 chr10 76129790 76129928 -69459360 - MIR SINE MIR -24 238 95 240 257 176 0 chr10 76131025 76131099 -69458189 - MIR SINE MIR -112 150 64 2139 108 3 10 chr10 76131708 76132015 -69457273 + AluSx SINE Alu 1 305 -7 1058 215 72 0 chr10 76132109 76132304 -69456984 + MER3 DNA MER1_type 1 209 0 765 286 80 5 chr10 76132575 76132799 -69456489 - MIR SINE MIR -2 260 20 197 323 121 30 chr10 76132817 76132916 -69456372 - L2 LINE L2 -1 3312 3205 236 281 0 16 chr10 76133156 76133220 -69456068 + L2 LINE L2 3248 3310 -3 253 277 268 0 chr10 76134003 76134115 -69455173 + MER5A DNA MER1_type 37 178 -11 218 103 0 26 chr10 76135328 76135367 -69453921 + (GGGA)n Simple_repeat Simple_repeat 3 40 0 211 250 0 0 chr10 76136057 76136105 -69453183 - L2 LINE L2 -211 3061 3014 187 222 0 123 chr10 76136707 76136788 -69452500 + MIR3 SINE MIR 90 160 -48 234 62 0 0 chr10 76137594 76137626 -69451662 + (TC)n Simple_repeat Simple_repeat 2 33 0 279 0 0 0 chr10 76137626 76137657 -69451631 + (CA)n Simple_repeat Simple_repeat 1 31 0 337 324 50 0 chr10 76139268 76139450 -69449838 + MER117 DNA MER1_type 1 191 -6 278 331 31 71 chr10 76139649 76139694 -69449594 - MIR3 SINE MIR -11 197 152 394 244 184 12 chr10 76139694 76139862 -69449426 + MER117 DNA MER1_type 1 197 0 278 331 31 71 chr10 76139862 76139943 -69449345 - MIR3 SINE MIR -56 152 76 212 345 46 0 chr10 76140916 76141003 -69448285 + MIR SINE MIR 55 145 -63 255 238 67 57 chr10 76141189 76141294 -69447994 - MIR SINE MIR -51 211 106 657 235 34 34 chr10 76141304 76141483 -69447805 - MIR SINE MIR -1 261 83 315 336 36 29 chr10 76142762 76142902 -69446386 - MIR3 SINE MIR -52 156 16 455 291 189 19 chr10 76143695 76144066 -69445222 - L1ME4a LINE L1 -78 6043 5610 237 296 61 41 chr10 76144786 76144884 -69444404 - MIR SINE MIR -76 186 87 496 234 9 0 chr10 76145532 76145643 -69443645 - MIR3 SINE MIR -49 159 48 186 318 94 12 chr10 76146009 76146094 -69443194 + MIR SINE MIR 102 193 -69 196 269 0 19 chr10 76146207 76146259 -69443029 + MIR SINE MIR 94 144 -118 276 253 13 0 chr10 76146691 76146766 -69442522 - MIR SINE MIR -97 165 90 324 264 55 11 chr10 76146841 76146932 -69442356 - MIR SINE MIR -90 172 78 302 123 88 0 chr10 76147366 76147423 -69441865 - MIR SINE MIR -69 139 78 2085 133 13 0 chr10 76147867 76148175 -69441113 + AluSx SINE Alu 1 312 0 322 185 31 0 chr10 76148262 76148327 -69440961 - MIR SINE MIR -68 140 74 340 279 158 37 chr10 76148367 76148557 -69440731 - MIR SINE MIR -14 248 36 220 310 0 0 chr10 76149921 76149979 -69439309 + MIR SINE MIR 90 147 -61 198 214 18 36 chr10 76150294 76150350 -69438938 + MIR3 SINE MIR 113 167 -41 458 279 111 6 chr10 76150482 76150654 -69438634 + MIR SINE MIR 46 235 -27 313 293 130 0 chr10 76151292 76151415 -69437873 - L2 LINE L2 0 3313 3175 353 309 118 29 chr10 76151615 76151861 -69437427 - L2 LINE L2 -88 3225 2958 487 183 67 17 chr10 76151954 76152074 -69437214 + MIR SINE MIR 21 146 -62 265 299 221 8 chr10 76152884 76153011 -69436277 + MIR SINE MIR 47 200 -62 401 289 133 0 chr10 76153063 76153191 -69436097 - MIR SINE MIR -14 248 104 639 211 63 0 chr10 76153442 76153584 -69435704 + MER5A DNA MER1_type 39 189 0 955 119 0 8 chr10 76153610 76153744 -69435544 + FLAM_C SINE Alu 1 133 0 498 301 119 18 chr10 76153748 76153967 -69435321 + MIR SINE MIR 20 260 -2 206 325 37 30 chr10 76154680 76154784 -69434504 - MIR SINE MIR -63 145 69 2269 73 0 13 chr10 76155298 76155598 -69433690 + AluY SINE Alu 1 296 -15 377 289 25 38 chr10 76155604 76155763 -69433525 + MIR3 SINE MIR 9 165 -43 383 234 73 48 chr10 76155853 76155977 -69433311 - MIR SINE MIR -129 133 7 202 329 183 17 chr10 76156636 76157123 -69432165 - L2 LINE L2 -222 3050 2484 395 317 92 0 chr10 76158569 76158711 -69430577 - MIR SINE MIR -76 186 32 598 252 26 13 chr10 76158839 76158990 -69430298 - MIR SINE MIR -40 222 70 253 244 0 51 chr10 76159415 76159493 -69429795 - MIR SINE MIR -74 134 61 254 294 63 24 chr10 76159762 76159888 -69429400 + MIR3 SINE MIR 58 188 -20 433 338 27 6 chr10 76161632 76161813 -69427475 - MIR SINE MIR -9 199 9 685 253 12 0 chr10 76162543 76162709 -69426579 - MER3 DNA MER1_type -87 122 2 183 234 62 16 chr10 76163204 76163268 -69426020 - MIR SINE MIR -93 115 49 201 319 159 18 chr10 76164435 76164548 -69424740 + MIR SINE MIR 21 149 -59 283 299 27 64 chr10 76165223 76165594 -69423694 + L1MC/D LINE L1 5244 5595 -805 185 361 103 7 chr10 76167017 76167172 -69422116 - L2 LINE L2 -725 2589 2420 237 132 0 0 chr10 76167804 76167842 -69421446 + (TCCA)n Simple_repeat Simple_repeat 3 40 0 527 324 11 0 chr10 76167911 76168087 -69421201 + (TCCA)n Simple_repeat Simple_repeat 3 180 0 260 308 132 35 chr10 76169599 76169826 -69419462 - MIR SINE MIR -2 260 12 413 230 24 63 chr10 76169897 76170023 -69419265 + MIR3 SINE MIR 39 159 -49 22 0 0 0 chr10 76171010 76171032 -69418256 + AT_rich Low_complexity Low_complexity 1 22 0 311 269 55 62 chr10 76171287 76171432 -69417856 - MIR SINE MIR -106 156 13 223 275 12 25 chr10 76172451 76172531 -69416757 - L3b LINE CR1 -211 1372 1294 304 307 10 10 chr10 76172776 76172877 -69416411 - MIR3 SINE MIR -9 199 99 370 250 52 9 chr10 76173525 76173641 -69415647 + MER103 DNA DNA 1 121 -45 362 236 24 93 chr10 76173787 76174014 -69415274 - MER91B DNA MER1_type -2 188 4 379 287 19 0 chr10 76174290 76174398 -69414890 + MIR3 SINE MIR 78 187 -21 24 32 0 0 chr10 76174508 76174539 -69414749 + AT_rich Low_complexity Low_complexity 1 31 0 189 107 0 0 chr10 76175063 76175091 -69414197 + (CACG)n Simple_repeat Simple_repeat 4 31 0 360 297 10 0 chr10 76175577 76175678 -69413610 - MIR SINE MIR -74 134 33 306 125 0 0 chr10 76177280 76177328 -69411960 + (CA)n Simple_repeat Simple_repeat 1 48 0 216 200 0 0 chr10 76177391 76177436 -69411852 + T-rich Low_complexity Low_complexity 1 45 0 360 268 29 36 chr10 76177636 76177774 -69411514 - MLT1G1 LTR MaLR -194 336 200 1021 240 9 0 chr10 76177776 76177993 -69411295 - MLT1G1 LTR MaLR -374 221 3 564 226 7 7 chr10 76177994 76178131 -69411157 - L1MEc LINE L1 -2246 3969 3833 624 254 8 0 chr10 76178134 76178252 -69411036 + FLAM_C SINE Alu 2 120 -23 372 43 0 0 chr10 76178252 76178298 -69410990 + (TAAA)n Simple_repeat Simple_repeat 2 47 0 337 230 9 0 chr10 76178306 76178419 -69410869 - L1MEc LINE L1 -2373 3842 3729 437 316 46 29 chr10 76178441 76178748 -69410540 - L1MEc LINE L1 -3940 2456 2145 308 360 37 28 chr10 76178763 76178977 -69410311 - L1MEc LINE L1 -4182 2033 1818 615 325 90 6 chr10 76179005 76179316 -69409972 - L1MEc LINE L1 -4579 1817 1481 230 259 0 0 chr10 76180189 76180243 -69409045 - L1MEc LINE L1 -5557 839 786 590 308 44 6 chr10 76181377 76181559 -69407729 - MIR SINE MIR -56 206 18 589 332 151 9 chr10 76181692 76182029 -69407259 + L3 LINE CR1 1192 1576 -1 366 237 178 50 chr10 76182473 76182692 -69406596 + Charlie8 DNA MER1_type 34 280 -2137 232 293 24 0 chr10 76182777 76182859 -69406429 + Charlie8 DNA MER1_type 378 461 -1956 1667 174 17 13 chr10 76183674 76183973 -69405315 - AluJo SINE Alu -12 300 1 258 32 0 0 chr10 76184298 76184329 -69404959 + (TGAA)n Simple_repeat Simple_repeat 4 34 0 358 294 17 8 chr10 76184489 76184608 -69404680 + MIR3 SINE MIR 5 124 -84 253 260 26 0 chr10 76185019 76185096 -69404192 + MIR SINE MIR 70 148 -60 254 279 139 8 chr10 76185996 76186125 -69403163 + MIR3 SINE MIR 33 178 -30 493 301 54 60 chr10 76186354 76186690 -69402598 - L2 LINE L2 -124 3189 2856 1909 108 34 0 chr10 76186696 76186965 -69402323 + AluSx SINE Alu 1 278 -34 222 276 118 0 chr10 76188358 76188434 -69400854 + MIR SINE MIR 169 253 -9 699 290 39 13 chr10 76188442 76188673 -69400615 - MIR SINE MIR -6 256 20 304 287 25 64 chr10 76188821 76188978 -69400310 - MIR3 SINE MIR -57 151 1 2061 117 0 0 chr10 76189946 76190236 -69399052 + AluSx SINE Alu 1 290 -22 659 311 32 40 chr10 76190373 76190451 -69398837 - MIR SINE MIR -15 247 170 1899 226 140 8 chr10 76190451 76190964 -69398324 - MER119 DNA MER1_type 0 583 3 659 311 32 40 chr10 76190964 76191133 -69398155 - MIR SINE MIR -92 170 2 193 291 145 17 chr10 76191175 76191292 -69397996 - MIR SINE MIR -60 148 17 328 232 146 62 chr10 76191566 76191745 -69397543 + MIR3 SINE MIR 20 208 0 322 371 13 7 chr10 76192113 76192264 -69397024 - L3 LINE CR1 -74 1503 1352 2290 94 3 0 chr10 76192291 76192599 -69396689 - AluSg1 SINE Alu 0 309 1 409 257 74 57 chr10 76193293 76193468 -69395820 + MIR SINE MIR 29 206 -56 1971 124 3 0 chr10 76193491 76193802 -69395486 + AluSx SINE Alu 1 312 0 285 272 37 0 chr10 76193982 76194063 -69395225 - MIR SINE MIR -88 120 37 407 286 76 36 chr10 76194678 76194903 -69394385 + MLT1G LTR MaLR 353 566 -24 474 287 64 0 chr10 76194912 76195069 -69394219 + L1ME3A LINE L1 5997 6163 -7 262 297 9 27 chr10 76195445 76195556 -69393732 - L2 LINE L2 -2227 1087 979 1641 158 0 21 chr10 76195693 76195984 -69393304 + AluJo SINE Alu 8 292 -20 549 239 45 26 chr10 76196424 76196579 -69392709 + MIR SINE MIR 28 185 -77 269 203 232 49 chr10 76196680 76196846 -69392442 - MIR SINE MIR -51 157 1 2044 98 6 49 chr10 76196986 76197313 -69391975 - AluSq SINE Alu 0 313 1 210 250 21 0 chr10 76197383 76197431 -69391857 + CT-rich Low_complexity Low_complexity 6 54 0 2707 174 53 16 chr10 76197632 76198195 -69391093 + MER34C LTR ERV1 2 585 0 424 191 52 61 chr10 76199123 76199238 -69390050 + MIR SINE MIR 59 172 -90 2284 74 3 22 chr10 76200064 76200375 -69388913 - AluSx SINE Alu -7 305 1 21 0 0 0 chr10 76200901 76200922 -69388366 + GC_rich Low_complexity Low_complexity 1 21 0 886 175 26 6 chr10 76202057 76202236 -69387052 - MLT1A2 LTR MaLR -19 371 188 202 213 0 21 chr10 76202463 76202510 -69386778 - L2 LINE L2 -1 3271 3226 550 273 20 7 chr10 76202631 76202781 -69386507 + MIR SINE MIR 39 190 -72 202 280 84 56 chr10 76202847 76202954 -69386334 + MIR SINE MIR 73 182 -80 290 216 27 40 chr10 76203385 76203459 -69385829 - MIR SINE MIR -68 140 68 202 271 217 8 chr10 76203513 76203642 -69385646 + MIR SINE MIR 1 156 -52 22 70 0 0 chr10 76203690 76203733 -69385555 + AT_rich Low_complexity Low_complexity 1 43 0 421 326 61 26 chr10 76203816 76204080 -69385208 - L1MC4a LINE L1 -1736 6072 5800 181 240 80 0 chr10 76204211 76204261 -69385027 + MIR3 SINE MIR 148 201 -7 1344 261 77 32 chr10 76204962 76205429 -69383859 - MLT1J LTR MaLR -9 502 15 181 326 50 21 chr10 76205460 76205601 -69383687 - L2 LINE L2 -273 2999 2855 712 176 155 5 chr10 76205723 76205916 -69383372 - MER31B LTR ERV1 -2 464 243 942 172 137 10 chr10 76205935 76206139 -69383149 - MER8 DNA MER2_type 0 239 10 285 230 126 35 chr10 76206141 76206228 -69383060 - MER31A LTR ERV1 -218 267 82 831 251 87 0 chr10 76206233 76206452 -69382836 - MER8 DNA MER2_type 0 239 2 763 202 11 16 chr10 76206462 76206645 -69382643 - MER31B LTR ERV1 -284 182 1 571 198 0 0 chr10 76207020 76207121 -69382167 + U13 snRNA snRNA 2 102 -2 312 259 47 12 chr10 76207132 76207217 -69382071 - MER5B DNA MER1_type -49 129 42 334 250 104 0 chr10 76207399 76207495 -69381793 + MER5A DNA MER1_type 9 114 -75 438 251 10 103 chr10 76207556 76207607 -69381681 + MIR SINE MIR 78 132 -130 2145 109 0 10 chr10 76207607 76207911 -69381377 - AluJb SINE Alu -11 301 1 438 251 10 103 chr10 76207911 76208062 -69381226 + MIR SINE MIR 132 261 -1 339 301 137 27 chr10 76209131 76209314 -69379974 - MIR SINE MIR -3 259 57 307 257 53 18 chr10 76210112 76210225 -69379063 - MIR SINE MIR -20 242 126 319 304 103 3 chr10 76210766 76210934 -69378354 - MIR SINE MIR -53 209 22 310 120 0 20 chr10 76210959 76211009 -69378279 - MER5B DNA MER1_type -8 170 122 1106 119 0 0 chr10 76211016 76211175 -69378113 + AluSg/x SINE Alu 150 308 -4 283 213 160 21 chr10 76211192 76211286 -69378002 - MER5B DNA MER1_type -67 111 5 687 141 0 74 chr10 76211295 76211430 -69377858 + FLAM_A SINE Alu 1 125 -8 342 284 100 37 chr10 76211439 76211629 -69377659 + L3b LINE CR1 1251 1452 -131 245 164 33 49 chr10 76212433 76212494 -69376794 - MIR SINE MIR -14 248 189 469 293 95 22 chr10 76212495 76212727 -69376561 - MIR SINE MIR -9 253 5 896 242 178 38 chr10 76212859 76213309 -69375979 - L2 LINE L2 -1312 2002 1490 353 210 12 25 chr10 76213333 76213414 -69375874 + MER112 DNA MER1_type 179 258 -2 227 206 147 29 chr10 76213457 76213525 -69375763 - MIR SINE MIR -114 148 73 190 319 167 14 chr10 76213547 76213685 -69375603 - MER5A DNA MER1_type -13 176 18 2091 107 10 13 chr10 76213792 76214138 -69375150 - AluSx SINE Alu 0 349 5 194 323 0 0 chr10 76215760 76215822 -69373466 + MIR SINE MIR 36 97 -111 688 211 68 53 chr10 76215872 76216062 -69373226 - MER58A DNA MER1_type -11 213 21 478 297 159 0 chr10 76216138 76216320 -69372968 + L2 LINE L2 3103 3313 0 214 289 77 10 chr10 76216448 76216552 -69372736 + L2 LINE L2 2851 2961 -311 204 40 0 0 chr10 76216639 76216664 -69372624 + (T)n Simple_repeat Simple_repeat 1 25 0 258 293 40 0 chr10 76216682 76216757 -69372531 + L2 LINE L2 3236 3313 0 816 211 153 23 chr10 76217711 76218041 -69371247 - MLT1C LTR MaLR 0 390 7 2193 126 3 3 chr10 76220167 76220468 -69368820 + AluSx SINE Alu 1 301 -11 294 243 17 0 chr10 76220792 76220875 -69368413 + MIR SINE MIR 81 147 -61 319 296 41 0 chr10 76222001 76222099 -69367189 - MER91C DNA MER1_type -36 104 3 1940 231 106 4 chr10 76223315 76223853 -69365435 - MLT1E LTR MaLR 0 593 1 1788 149 52 3 chr10 76224670 76224958 -69364330 - AluJo SINE Alu -10 302 1 915 128 0 0 chr10 76225366 76225491 -69363797 + FLAM_C SINE Alu 9 133 -10 442 256 56 0 chr10 76226688 76226813 -69362475 + MER117 DNA MER1_type 32 163 -34 392 221 188 20 chr10 76226890 76227039 -69362249 - MLT1G1 LTR MaLR -6 536 363 556 259 84 7 chr10 76227080 76227262 -69362026 - MLT1G1 LTR MaLR -334 256 47 299 286 84 45 chr10 76227954 76228108 -69361180 - MIR SINE MIR -40 222 63 1630 157 0 22 chr10 76228109 76228376 -69360912 + AluJo SINE Alu 1 261 -51 252 231 231 0 chr10 76229836 76229927 -69359361 - L2 LINE L2 0 3272 3161 574 280 25 0 chr10 76230045 76230202 -69359086 - MIR3 SINE MIR -25 183 23 1068 257 113 0 chr10 76230473 76230773 -69358515 - LTR16C LTR ERVL -2 489 156 288 331 123 23 chr10 76230983 76231243 -69358045 - MLT1K LTR MaLR -154 434 149 281 326 0 12 chr10 76231649 76231735 -69357553 + L2 LINE L2 3223 3307 -6 309 264 82 9 chr10 76231758 76231868 -69357420 + MIR SINE MIR 16 133 -75 324 0 0 0 chr10 76232004 76232040 -69357248 + (TG)n Simple_repeat Simple_repeat 2 37 0 465 306 123 30 chr10 76232465 76232700 -69356588 + MIR SINE MIR 2 258 -4 447 351 44 0 chr10 76232934 76233162 -69356126 - MIR SINE MIR -17 245 8 1291 275 122 28 chr10 76233608 76234110 -69355178 - MLT1G1 LTR MaLR -43 552 4 216 189 36 36 chr10 76234135 76234246 -69355042 + CT-rich Low_complexity Low_complexity 4 114 0 193 206 175 16 chr10 76234262 76234325 -69354963 - L2 LINE L2 -52 3220 3148 397 302 94 0 chr10 76234744 76234893 -69354395 - MER117 DNA MER1_type -34 163 1 1011 266 13 0 chr10 76235848 76236085 -69353203 - MIR SINE MIR -16 246 7 420 273 129 17 chr10 76236767 76236969 -69352319 - MIR SINE MIR -10 252 30 240 214 18 0 chr10 76237099 76237155 -69352133 + (TG)n Simple_repeat Simple_repeat 2 58 0 1817 143 19 19 chr10 76238236 76238543 -69350745 + AluJo SINE Alu 3 309 -3 217 240 20 0 chr10 76238589 76238639 -69350649 - MIR SINE MIR -110 152 102 1718 158 7 45 chr10 76238655 76238822 -69350466 - AluJb SINE Alu -30 282 129 2444 72 0 3 chr10 76238822 76239115 -69350173 + AluY SINE Alu 1 292 -19 1718 158 7 45 chr10 76239115 76239239 -69350049 - AluJb SINE Alu -183 129 2 203 220 17 51 chr10 76239239 76239298 -69349990 - MIR SINE MIR -146 116 60 296 253 75 41 chr10 76239478 76239624 -69349664 - MIR SINE MIR -52 210 60 278 344 25 25 chr10 76239677 76239840 -69349448 - MIR SINE MIR -39 223 61 471 268 9 0 chr10 76240390 76240502 -69348786 + MER81 DNA DNA 2 114 0 2082 136 7 13 chr10 76240591 76240901 -69348387 - AluJb SINE Alu -2 310 3 373 219 31 0 chr10 76241389 76241485 -69347803 - MIR SINE MIR -61 147 49 242 231 92 0 chr10 76241555 76241620 -69347668 - MIR SINE MIR -60 148 78 184 293 121 83 chr10 76241810 76241822 -69347466 - L2 LINE L2 -96 3217 3207 2166 129 3 0 chr10 76241822 76242117 -69347171 - AluSx SINE Alu 0 312 17 184 293 121 83 chr10 76242117 76242261 -69347027 - L2 LINE L2 -106 3207 3055 746 309 46 4 chr10 76242269 76242531 -69346757 + L1ME LINE L1 5533 5805 -316 1610 166 10 76 chr10 76242818 76243152 -69346136 - AluJo SINE Alu 0 314 1 2067 130 0 41 chr10 76245147 76245463 -69343825 - AluJo SINE Alu -9 303 1 662 83 0 0 chr10 76245490 76245586 -69343702 - AluSg/x SINE Alu 0 310 215 2362 108 0 6 chr10 76246639 76246953 -69342335 + AluSq SINE Alu 1 312 -1 1358 162 0 45 chr10 76247661 76247908 -69341380 - AluJb SINE Alu 0 312 77 936 191 17 0 chr10 76247924 76248097 -69341191 + MLT-int LTR MaLR 362 537 -1198 498 127 0 0 chr10 76248102 76248173 -69341115 - AluJb SINE Alu -240 72 2 301 236 117 5 chr10 76248994 76249124 -69340164 + MIR SINE MIR 4 154 -62 391 275 137 39 chr10 76249488 76249626 -69339662 + MIR SINE MIR 1 124 -138 2001 143 0 38 chr10 76249626 76249941 -69339347 + AluJo SINE Alu 1 303 -9 391 275 137 39 chr10 76249941 76250035 -69339253 + MIR SINE MIR 124 256 -6 523 303 69 23 chr10 76250405 76250623 -69338665 + MIR SINE MIR 2 229 -33 1965 169 11 11 chr10 76250629 76250984 -69338304 + MLT1A1 LTR MaLR 11 365 0 1348 204 91 23 chr10 76250984 76251292 -69337996 + MLT-int LTR MaLR 338 666 -1069 331 104 0 0 chr10 76251462 76251510 -69337778 - MIR SINE MIR -113 149 102 22 0 0 30 chr10 76252202 76252223 -69337065 + AT_rich Low_complexity Low_complexity 1 22 -10 1056 153 0 0 chr10 76252223 76252386 -69336902 - FAM SINE Alu -12 163 1 22 0 0 30 chr10 76252386 76252397 -69336891 + AT_rich Low_complexity Low_complexity 22 32 0 296 93 37 0 chr10 76252397 76252451 -69336837 - Charlie1 DNA MER1_type -205 2556 2501 892 141 0 22 chr10 76252451 76252471 -69336817 - FLAM_C SINE Alu -180 132 113 597 224 11 0 chr10 76252471 76252654 -69336634 - L1MA4 LINE L1 -5 6295 6111 892 141 0 22 chr10 76252654 76252768 -69336520 - FLAM_C SINE Alu -199 113 1 341 207 24 0 chr10 76252775 76252857 -69336431 - L1MA4 LINE L1 -157 6143 6060 1005 198 15 5 chr10 76253287 76253489 -69335799 + MIR SINE MIR 8 211 -51 398 243 295 6 chr10 76253899 76254072 -69335216 - MIR SINE MIR -6 256 34 427 264 42 36 chr10 76254088 76254255 -69335033 + MER5A DNA MER1_type 18 185 -4 * 905 178 12 0 chr10 76254110 76254273 -69335015 - MER5A DNA MER1_type -24 165 1 269 200 0 0 chr10 76255192 76255247 -69334041 + MIR SINE MIR 111 165 -97 904 243 80 16 chr10 76255339 76255817 -69333471 + MER115 DNA AcHobo 89 670 -23 264 59 0 0 chr10 76256400 76256434 -69332854 + (CACCAT)n Simple_repeat Simple_repeat 5 38 0 241 250 0 0 chr10 76256680 76256740 -69332548 - L3 LINE CR1 -220 1357 1298 242 297 99 20 chr10 76256766 76256867 -69332421 - L2 LINE L2 0 3272 3164 372 324 18 63 chr10 76257042 76257264 -69332024 + L1MC4 LINE L1 7826 8037 -5 564 294 108 16 chr10 76257826 76258020 -69331268 - MIR SINE MIR -1 261 50 415 294 104 59 chr10 76258555 76258912 -69330376 + L1MCc LINE L1 1282 1621 -5501 1718 194 3 0 chr10 76258912 76259205 -69330083 + AluJb SINE Alu 1 294 -18 415 294 104 59 chr10 76259205 76259444 -69329844 + L1MCc LINE L1 1621 1848 -5274 2427 92 0 13 chr10 76259444 76259760 -69329528 + AluSx SINE Alu 1 312 0 415 294 104 59 chr10 76259760 76259982 -69329306 + L1MCc LINE L1 1848 2352 -4770 1107 152 6 12 chr10 76259982 76260153 -69329135 + FRAM SINE Alu 1 163 -13 526 313 238 12 chr10 76260153 76260489 -69328799 + L1MCc LINE L1 2362 2773 -4349 2001 104 0 0 chr10 76260495 76260746 -69328542 + AluSx SINE Alu 1 251 -61 3874 244 56 55 chr10 76260746 76261427 -69327861 + L1MCc LINE L1 3357 4036 -2905 1526 202 62 0 chr10 76261427 76261719 -69327569 + AluJo SINE Alu 1 310 -2 3874 244 56 55 chr10 76261719 76262735 -69326553 + L1MCc LINE L1 4036 5059 -1882 333 0 0 0 chr10 76262735 76262772 -69326516 + (CA)n Simple_repeat Simple_repeat 2 38 0 3874 244 56 55 chr10 76262772 76262987 -69326301 + L1MCc LINE L1 5059 5272 -1669 667 201 0 43 chr10 76262987 76263126 -69326162 + FLAM_A SINE Alu 1 133 0 1330 239 119 11 chr10 76263462 76263923 -69325365 - L1ME3A LINE L1 -5 6165 5655 1575 252 70 34 chr10 76263928 76264723 -69324565 - L1ME3A LINE L1 -1349 4797 3974 4733 174 46 9 chr10 76264724 76265414 -69323874 - L1MB4 LINE L1 0 6180 5517 689 171 5 131 chr10 76265414 76265613 -69323675 - FAM SINE Alu -1 174 1 4733 174 46 9 chr10 76265613 76266392 -69322896 - L1MB4 LINE L1 -663 5517 4678 297 53 0 0 chr10 76266507 76266569 -69322719 + Alu SINE Alu 245 306 0 635 244 17 28 chr10 76266584 76266764 -69322524 - L1ME3 LINE L1 -21 6141 5964 231 211 18 0 chr10 76266880 76266937 -69322351 + Charlie8 DNA MER1_type 2356 2413 -4 293 284 57 11 chr10 76266949 76267037 -69322251 - MIR3 SINE MIR -27 181 90 234 182 0 36 chr10 76267417 76267472 -69321816 + GA-rich Low_complexity Low_complexity 4 56 0 2316 112 0 13 chr10 76267886 76268191 -69321097 - AluSx SINE Alu -11 301 1 472 180 11 0 chr10 76268383 76268472 -69320816 - Charlie5 DNA MER1_type 0 2622 2533 888 144 0 0 chr10 76268472 76268597 -69320691 - AluJb SINE Alu -15 297 173 457 286 58 29 chr10 76268981 76269187 -69320101 - Charlie8 DNA MER1_type -2148 269 58 357 247 0 0 chr10 76269187 76269264 -69320024 - L2 LINE L2 -1 3312 3236 885 281 18 0 chr10 76269372 76269596 -69319692 - MIR SINE MIR 0 262 35 268 316 32 0 chr10 76269635 76269730 -69319558 - MIR SINE MIR -55 153 56 183 329 0 14 chr10 76269963 76270033 -69319255 + MIR3 SINE MIR 100 168 -40 271 180 20 0 chr10 76270299 76270349 -69318939 + MIR SINE MIR 97 147 -61 313 280 50 20 chr10 76270660 76270760 -69318528 - L2 LINE L2 -10 3303 3201 240 35 0 0 chr10 76270823 76270852 -69318436 + (GA)n Simple_repeat Simple_repeat 2 30 0 617 206 26 45 chr10 76272453 76272608 -69316680 + MIR SINE MIR 29 180 -82 689 176 0 0 chr10 76272758 76272889 -69316399 - AluY SINE Alu -179 132 2 246 81 0 0 chr10 76272981 76273018 -69316270 + (CA)n Simple_repeat Simple_repeat 1 37 0 344 273 115 10 chr10 76273135 76273315 -69315973 - MIR SINE MIR 0 262 62 354 250 81 14 chr10 76273864 76274012 -69315276 - L1ME3A LINE L1 -72 6098 5941 21 36 0 0 chr10 76274886 76274914 -69314374 + AT_rich Low_complexity Low_complexity 1 28 0 2081 133 3 0 chr10 76274924 76275209 -69314079 - AluSx SINE Alu -26 286 1 943 189 0 11 chr10 76275932 76276107 -69313181 - FAM SINE Alu -1 174 2 634 151 0 0 chr10 76276421 76276527 -69312761 - MER5A DNA MER1_type -80 109 4 432 0 0 0 chr10 76277250 76277298 -69311990 + (CA)n Simple_repeat Simple_repeat 2 49 0 296 377 45 0 chr10 76278671 76278825 -69310463 - L3 LINE CR1 -2 1575 1415 263 312 21 11 chr10 76278875 76278968 -69310320 - L3 LINE CR1 -343 1234 1141 356 296 127 11 chr10 76278992 76279181 -69310107 - MIR SINE MIR -35 227 17 215 61 30 0 chr10 76279181 76279214 -69310074 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 542 290 121 48 chr10 76279220 76279510 -69309778 - L2 LINE L2 -32 3240 2930 375 169 0 0 chr10 76279861 76279926 -69309362 + AluJ/FLAM SINE Alu 1 65 -237 747 261 51 9 chr10 76280053 76280268 -69309020 + MER58A DNA MER1_type 1 224 0 255 157 0 0 chr10 76280301 76280352 -69308936 + (CA)n Simple_repeat Simple_repeat 2 52 0 448 302 100 21 chr10 76280399 76280730 -69308558 - L2 LINE L2 -688 2626 2270 379 315 36 18 chr10 76280774 76280939 -69308349 + MIR3 SINE MIR 28 195 -13 428 213 148 0 chr10 76281025 76281180 -69308108 - LTR33A LTR ERVL -84 439 262 380 280 78 89 chr10 76281390 76281683 -69307605 - L2 LINE L2 -59 3213 2924 283 247 67 11 chr10 76282057 76282146 -69307142 + MIR SINE MIR 70 163 -99 290 287 77 28 chr10 76282542 76282685 -69306603 + LTR67 LTR ERVL 408 557 0 193 196 65 0 chr10 76282911 76282957 -69306331 + L2 LINE L2 3148 3196 -76 * 358 321 62 76 chr10 76282953 76283376 -69305912 - L2 LINE L2 -1 3271 2855 180 255 19 113 chr10 76283879 76283985 -69305303 + MIR SINE MIR 117 212 -50 236 256 8 77 chr10 76284985 76285102 -69304186 - MIR3 SINE MIR -21 187 79 656 275 50 42 chr10 76285125 76285365 -69303923 - MIR SINE MIR -1 261 20 328 239 176 57 chr10 76285376 76285535 -69303753 - MER5B DNA MER1_type 0 178 1 366 260 10 0 chr10 76285572 76285668 -69303620 + MIR SINE MIR 49 145 -117 500 267 205 26 chr10 76285672 76285867 -69303421 + MIR SINE MIR 19 248 -14 273 221 15 0 chr10 76286084 76286152 -69303136 - L1ME4a LINE L1 -100 6021 5953 228 268 226 21 chr10 76286259 76286494 -69302794 + L1MEc LINE L1 1703 1985 -4411 225 310 43 9 chr10 76286697 76286813 -69302475 - L1ME4a LINE L1 -1897 5911 5792 460 281 0 0 chr10 76286818 76286914 -69302374 - MER45 DNA AcHobo -1485 96 1 1076 231 64 52 chr10 76287338 76287608 -69301680 - MER113 DNA MER1_type? -85 436 158 1993 85 0 19 chr10 76287608 76287868 -69301420 + AluY SINE Alu 40 294 -17 1076 231 64 52 chr10 76287868 76288021 -69301267 - MER113 DNA MER1_type? -363 158 8 180 250 61 145 chr10 76288321 76288617 -69300671 + L2 LINE L2 2917 3187 -85 282 293 26 35 chr10 76288627 76288743 -69300545 + MIR SINE MIR 30 144 -64 531 182 9 18 chr10 76288847 76288957 -69300331 - MIR SINE MIR -46 216 108 441 237 75 122 chr10 76288958 76289320 -69299968 - MLT1J2 LTR MaLR 0 419 66 2509 83 3 0 chr10 76289654 76289954 -69299334 - AluSp SINE Alu -12 301 1 1189 67 0 0 chr10 76289954 76290089 -69299199 - AluSg SINE Alu -175 135 1 292 315 94 8 chr10 76290093 76290220 -69299068 - MIR SINE MIR -48 214 77 985 239 5 5 chr10 76290705 76290910 -69298378 + AluJb SINE Alu 108 312 0 434 217 33 50 chr10 76290964 76291084 -69298204 + MIR SINE MIR 30 147 -61 515 225 36 22 chr10 76291111 76291249 -69298039 + MIR SINE MIR 33 172 -90 2222 129 0 3 chr10 76291250 76291553 -69297735 - AluSx SINE Alu -10 302 1 231 195 26 78 chr10 76291908 76291985 -69297303 - MER91B DNA MER1_type -117 73 1 257 135 0 39 chr10 76292220 76292272 -69297016 + MIR SINE MIR 101 150 -112 319 283 193 24 chr10 76292569 76292735 -69296553 - MIR SINE MIR -21 241 48 433 314 26 7 chr10 76292787 76292940 -69296348 - MIR SINE MIR -4 258 103 393 58 0 0 chr10 76293325 76293377 -69295911 + (TCCA)n Simple_repeat Simple_repeat 1 52 0 614 221 81 59 chr10 76293469 76293533 -69295755 + L1MC5 LINE L1 7640 7701 -260 1380 146 75 8 chr10 76293533 76293801 -69295487 - L1MC1 LINE L1 0 6333 6048 614 221 81 59 chr10 76293801 76294008 -69295280 + L1MC5 LINE L1 7701 7917 -44 292 217 14 29 chr10 76294477 76294546 -69294742 - MIR SINE MIR -60 148 81 2038 184 53 59 chr10 76295141 76295653 -69293635 - LTR54 LTR ERV1 0 510 2 207 349 111 24 chr10 76295763 76295889 -69293399 + MIR SINE MIR 90 226 -36 917 241 14 14 chr10 76295955 76296171 -69293117 - LTR16C LTR ERVL -2 489 274 806 205 32 32 chr10 76296171 76296356 -69292932 - MER5A DNA MER1_type -2 187 3 520 289 64 6 chr10 76296360 76296516 -69292772 - LTR16C LTR ERVL -220 271 107 309 179 0 0 chr10 76296653 76296709 -69292579 + MER69 DNA AcHobo 83 138 -1088 * 681 129 37 80 chr10 76296688 76296851 -69292437 + MER69 DNA AcHobo 2368 2523 -3 324 313 168 24 chr10 76296918 76297126 -69292162 + MIR SINE MIR 18 255 -7 1953 95 39 42 chr10 76297838 76298157 -69291131 + AluSq SINE Alu 1 318 0 591 141 7 15 chr10 76298157 76298299 -69290989 + LTR24 LTR ERV1 325 467 0 233 223 155 29 chr10 76298463 76298566 -69290722 - MIR SINE MIR -130 132 17 544 272 60 18 chr10 76299220 76299650 -69289638 + MER113 DNA MER1_type? 40 517 -4 203 114 23 0 chr10 76300481 76300525 -69288763 + CT-rich Low_complexity Low_complexity 2 46 0 274 286 0 3 chr10 76300665 76300759 -69288529 + MIR SINE MIR 51 143 -65 201 256 47 0 chr10 76301943 76302022 -69287266 - MIR SINE MIR -58 150 105 307 273 50 121 chr10 76302408 76302690 -69286598 + L2 LINE L2 2989 3250 -22 22 35 0 0 chr10 76302700 76302729 -69286559 + AT_rich Low_complexity Low_complexity 1 29 0 199 256 0 0 chr10 76302902 76302945 -69286343 + MIR SINE MIR 104 146 -62 314 217 43 11 chr10 76303148 76303240 -69286048 - MIR3 SINE MIR -13 195 101 496 257 146 24 chr10 76303250 76303456 -69285832 - MIR SINE MIR -12 250 20 309 283 72 36 chr10 76303647 76303813 -69285475 - L3 LINE CR1 -35 1542 1371 216 0 0 0 chr10 76303893 76303917 -69285371 + (CA)n Simple_repeat Simple_repeat 2 25 0 1899 143 0 40 chr10 76305996 76306297 -69282991 - AluSx SINE Alu -23 289 1 1667 155 44 7 chr10 76306339 76306635 -69282653 - AluSx SINE Alu -5 307 1 318 149 0 45 chr10 76307077 76307144 -69282144 + Alu SINE Alu 239 302 0 304 322 35 0 chr10 76307417 76307504 -69281784 - L1MC4 LINE L1 -1343 6699 6610 1827 112 87 14 chr10 76307615 76307902 -69281386 + AluSx SINE Alu 1 308 -4 1258 177 5 0 chr10 76307903 76308118 -69281170 + MLT1D LTR MaLR 290 505 0 343 129 0 43 chr10 76310178 76310248 -69279040 + MIR SINE MIR 85 151 -57 777 299 9 0 chr10 76310538 76310752 -69278536 + MIR SINE MIR 47 262 0 223 310 168 9 chr10 76310745 76310858 -69278430 - MIR SINE MIR -62 146 16 * 2222 113 0 7 chr10 76311247 76311549 -69277739 + AluSc SINE Alu 2 301 -8 396 243 121 21 chr10 76311558 76311698 -69277590 + MER103 DNA DNA 12 165 -1 2323 85 3 3 chr10 76311777 76312070 -69277218 + AluSx SINE Alu 10 302 -10 220 275 44 33 chr10 76312865 76312956 -69276332 + MIR SINE MIR 60 151 -111 572 197 7 20 chr10 76313872 76314024 -69275264 - L1MB8 LINE L1 0 6178 6029 2143 131 0 29 chr10 76314027 76314444 -69274844 + AluJo SINE Alu 1 408 0 2799 206 59 52 chr10 76314445 76314877 -69274411 - L1MB7 LINE L1 -148 6036 5609 2363 104 0 0 chr10 76314877 76315176 -69274112 - AluSx SINE Alu -13 299 1 2799 206 59 52 chr10 76315176 76315291 -69273997 - L1MB7 LINE L1 -575 5609 5496 2437 107 7 0 chr10 76315291 76315601 -69273687 - AluSx SINE Alu 0 312 1 2799 206 59 52 chr10 76315601 76315750 -69273538 - L1MB7 LINE L1 -688 5496 5350 2247 119 0 3 chr10 76315750 76316053 -69273235 - AluSx SINE Alu -10 302 1 2799 206 59 52 chr10 76316053 76316302 -69272986 - L1MB7 LINE L1 -834 5350 5093 202 179 48 60 chr10 76316704 76316788 -69272500 - L2 LINE L2 -338 2934 2852 183 349 47 0 chr10 76316851 76316957 -69272331 - L2 LINE L2 -874 2440 2330 291 260 32 51 chr10 76317454 76317588 -69271700 + L1MC4a LINE L1 5468 5596 -774 501 303 36 36 chr10 76317626 76317690 -69271598 + L1MC4a LINE L1 5678 5741 -2067 2088 75 54 41 chr10 76317690 76317985 -69271303 + AluSx SINE Alu 1 299 -13 501 303 36 36 chr10 76317985 76318141 -69271147 + L1MC4a LINE L1 5740 5898 -1910 591 184 8 3 chr10 76319358 76319718 -69269570 + (TG)n Simple_repeat Simple_repeat 1 362 0 292 349 16 0 chr10 76320440 76320569 -69268719 - L1ME LINE L1 -399 5722 5592 1743 271 165 4 chr10 76320631 76321566 -69267722 + L2 LINE L2 2177 3282 -31 427 203 41 3 chr10 76322250 76322363 -69266925 + MIR SINE MIR 11 124 -84 419 218 30 20 chr10 76323712 76323813 -69265475 + MIR SINE MIR 105 206 -56 195 42 0 0 chr10 76323850 76323874 -69265414 + (TTCC)n Simple_repeat Simple_repeat 1 24 0 288 349 12 0 chr10 76324014 76324100 -69265188 + MIR SINE MIR 72 158 -104 901 296 63 54 chr10 76324119 76324673 -69264615 + L1MC4a LINE L1 5329 5887 -1921 820 225 72 29 chr10 76324827 76325103 -69264185 + MER102b DNA MER1_type 54 341 0 2237 100 0 10 chr10 76325221 76325530 -69263758 + AluSx SINE Alu 7 312 0 259 266 21 75 chr10 76326291 76326385 -69262903 + MIR SINE MIR 33 121 -141 21 0 0 0 chr10 76326443 76326464 -69262824 + AT_rich Low_complexity Low_complexity 1 21 0 242 197 71 15 chr10 76327164 76327258 -69262030 + MIR SINE MIR 71 138 -70 285 387 32 72 chr10 76327377 76327752 -69261536 - L2 LINE L2 -1 3271 2912 220 226 19 0 chr10 76328167 76328220 -69261068 - L3 LINE CR1 -112 1465 1412 277 278 78 17 chr10 76328229 76328344 -69260944 - MIR3 SINE MIR -4 204 83 1992 142 0 10 chr10 76328593 76328904 -69260384 + AluSx SINE Alu 1 308 -4 769 267 35 47 chr10 76329008 76329263 -69260025 + MIR SINE MIR 10 261 -1 272 253 173 49 chr10 76329198 76329360 -69259928 - MIR SINE MIR -17 245 64 * 192 296 96 26 chr10 76330102 76330217 -69259071 - MIR3 SINE MIR -73 135 13 605 261 37 12 chr10 76331347 76331508 -69257780 - MIR SINE MIR 0 262 98 292 303 46 51 chr10 76331629 76331804 -69257484 - L2 LINE L2 -213 3059 2886 481 302 180 5 chr10 76332260 76332482 -69256806 + MIR SINE MIR 1 261 -1 248 333 103 8 chr10 76332516 76332633 -69256655 - L2 LINE L2 0 3272 3145 982 180 38 85 chr10 76332636 76332719 -69256569 - MER33 DNA MER1_type -2264 321 236 1742 150 10 39 chr10 76332719 76333026 -69256262 + AluJb SINE Alu 7 304 -8 982 180 38 85 chr10 76333026 76333258 -69256030 - MER33 DNA MER1_type -2349 236 21 326 280 312 16 chr10 76333605 76333855 -69255433 - L3 LINE CR1 -15 1562 1239 413 189 11 22 chr10 76335775 76335865 -69253423 + MIR3 SINE MIR 78 166 -42 532 320 34 11 chr10 76336488 76336666 -69252622 - L3 LINE CR1 -103 1474 1293 212 213 149 53 chr10 76336730 76336824 -69252464 - MIR SINE MIR -1 261 159 2308 88 0 7 chr10 76337419 76337724 -69251564 - AluSx SINE Alu -9 303 1 2216 283 135 12 chr10 76337742 76338791 -69250497 + L2 LINE L2 1868 3063 -250 308 317 107 15 chr10 76339565 76339770 -69249518 + L2 LINE L2 2862 3085 -187 243 296 28 0 chr10 76340072 76340143 -69249145 + L2 LINE L2 3200 3272 0 184 298 0 0 chr10 76341275 76341322 -69247966 - MIR3 SINE MIR -49 159 113 * 618 183 213 6 chr10 76341317 76341481 -69247807 + MIR SINE MIR 39 236 -26 1721 164 19 22 chr10 76341986 76342298 -69246990 - AluJo SINE Alu -1 311 1 939 177 53 0 chr10 76342312 76342521 -69246767 - L1MD3 LINE L1 -8 7987 7768 227 100 0 25 chr10 76342600 76342640 -69246648 + (TAGA)n Simple_repeat Simple_repeat 3 41 0 694 244 31 70 chr10 76342656 76342914 -69246374 - L2 LINE L2 0 3313 3066 245 302 104 0 chr10 76343012 76343108 -69246180 - MIR SINE MIR -67 141 36 614 284 99 26 chr10 76343854 76344086 -69245202 - MIR SINE MIR 0 262 14 180 312 15 116 chr10 76344108 76344307 -69244981 - L2 LINE L2 -93 3179 3001 486 343 110 4 chr10 76344410 76344646 -69244642 - MIR SINE MIR 0 262 2 279 339 36 0 chr10 76344800 76344912 -69244376 + MIR SINE MIR 29 144 -64 614 203 20 37 chr10 76345499 76345661 -69243627 + MIR3 SINE MIR 13 171 -52 382 256 19 51 chr10 76345754 76345910 -69243378 + MIR SINE MIR 56 206 -56 251 244 73 61 chr10 76345918 76345934 -69243354 + MIR SINE MIR 180 194 -68 2320 81 7 3 chr10 76345934 76346242 -69243046 - AluY SINE Alu -2 309 1 1703 141 34 24 chr10 76346242 76346539 -69242749 - AluJo SINE Alu -10 302 3 251 244 73 61 chr10 76346539 76346603 -69242685 + MIR SINE MIR 193 262 0 290 330 207 25 chr10 76346768 76347125 -69242163 - L3 LINE CR1 -25 1552 1131 * 679 250 82 14 chr10 76347116 76347336 -69241952 - MIR SINE MIR -25 237 3 180 294 211 9 chr10 76348838 76348947 -69240341 - MIR SINE MIR -46 216 86 237 262 0 49 chr10 76349028 76349089 -69240199 - MER5A DNA MER1_type -115 74 17 383 330 65 11 chr10 76349713 76349898 -69239390 + MIR SINE MIR 53 247 -15 855 253 5 15 chr10 76351140 76351338 -69237950 - MIR SINE MIR -64 198 3 611 315 65 10 chr10 76351380 76351580 -69237708 - MIR SINE MIR -15 247 37 335 283 92 46 chr10 76352064 76352216 -69237072 - MIR SINE MIR -1 261 103 738 269 15 0 chr10 76352218 76352415 -69236873 - MER3 DNA MER1_type -9 200 1 196 293 0 35 chr10 76352565 76352623 -69236665 - MIR SINE MIR -120 142 87 312 361 0 16 chr10 76353281 76353464 -69235824 + (TG)n Simple_repeat Simple_repeat 1 180 0 337 363 0 0 chr10 76353476 76353636 -69235652 + (TG)n Simple_repeat Simple_repeat 1 160 0 400 300 0 58 chr10 76353670 76353860 -69235428 + (TG)n Simple_repeat Simple_repeat 2 180 0 204 216 0 0 chr10 76354033 76354070 -69235218 + (TG)n Simple_repeat Simple_repeat 1 37 0 1117 187 11 0 chr10 76354447 76354634 -69234654 - MER5A DNA MER1_type 0 189 1 775 293 43 23 chr10 76354701 76354957 -69234331 + MIR SINE MIR 2 262 0 344 212 32 28 chr10 76354929 76355074 -69234214 - MIR3 SINE MIR -86 176 2 * 224 303 71 0 chr10 76355492 76355591 -69233697 + L2 LINE L2 2699 2804 -510 2969 194 18 63 chr10 76356295 76356770 -69232518 - L1ME1 LINE L1 -6 6160 5665 1962 140 3 0 chr10 76356770 76357062 -69232226 - AluSx SINE Alu -19 293 1 2969 194 18 63 chr10 76357062 76357153 -69232135 - L1ME1 LINE L1 -501 5665 5571 643 232 0 43 chr10 76357153 76357291 -69231997 - FLAM_A SINE Alu -1 132 1 2969 194 18 63 chr10 76357291 76357419 -69231869 - L1ME1 LINE L1 -595 5571 5439 1135 161 5 32 chr10 76357419 76357637 -69231651 - L1MB4 LINE L1 -1 6179 5968 2969 194 18 63 chr10 76357637 76357650 -69231638 - L1ME1 LINE L1 -727 5439 5427 1688 163 37 13 chr10 76357650 76357950 -69231338 - AluJb SINE Alu -5 307 1 2969 194 18 63 chr10 76357950 76358298 -69230990 - L1ME1 LINE L1 -739 5427 5151 234 382 118 31 chr10 76358374 76359199 -69230089 + L2 LINE L2 1845 3262 -10 563 255 53 41 chr10 76359233 76359661 -69229627 + LTR33A LTR ERVL 2 517 -6 250 290 29 0 chr10 76360541 76360610 -69228678 - L2 LINE L2 -5 3267 3197 654 279 104 17 chr10 76360658 76360898 -69228390 + MIR SINE MIR 2 262 0 291 276 35 11 chr10 76361731 76361818 -69227470 + MIR SINE MIR 113 201 -61 377 266 36 78 chr10 76361954 76362146 -69227142 + MIR3 SINE MIR 23 206 -2 359 324 44 0 chr10 76363054 76363190 -69226098 + MIR3 SINE MIR 36 177 -31 400 271 14 43 chr10 76363500 76363640 -69225648 - MIR3 SINE MIR -15 193 54 2335 95 0 0 chr10 76364346 76364651 -69224637 - AluSx SINE Alu -7 305 1 273 309 44 28 chr10 76364672 76364853 -69224435 + L2 LINE L2 2127 2310 -1004 488 244 177 6 chr10 76365053 76365217 -69224071 - MER117 DNA MER1_type 0 197 6 564 385 28 7 chr10 76365222 76365620 -69223668 + L2 LINE L2 2605 3013 -300 472 244 109 26 chr10 76366223 76366379 -69222909 - MIR SINE MIR -57 205 37 244 329 26 0 chr10 76367240 76367386 -69221902 - MLT1J2 LTR MaLR -192 217 70 245 315 222 17 chr10 76367512 76367814 -69221474 - L2 LINE L2 -5 3267 2904 238 349 205 8 chr10 76368000 76368258 -69221030 - L2 LINE L2 -774 2540 2232 278 209 26 17 chr10 76369349 76369464 -69219824 + CT-rich Low_complexity Low_complexity 3 118 0 406 295 23 0 chr10 76370832 76370961 -69218327 - MIR SINE MIR -29 233 102 201 222 63 0 chr10 76371746 76371809 -69217479 + MIR SINE MIR 30 96 -112 480 293 18 18 chr10 76371859 76372026 -69217262 - L1M4 LINE L1 -2051 4095 3929 2275 97 0 3 chr10 76372197 76372507 -69216781 - AluSc SINE Alu 0 309 1 332 338 53 8 chr10 76372518 76372651 -69216637 - MLT1L LTR MaLR -80 535 397 239 333 125 0 chr10 76373792 76373912 -69215376 - MIR SINE MIR -108 154 20 760 259 163 4 chr10 76373926 76374196 -69215092 - LTR16A LTR ERVL 0 450 138 314 290 21 0 chr10 76374258 76374351 -69214937 + L2 LINE L2 2944 3038 -234 555 174 11 0 chr10 76374464 76374556 -69214732 - Tigger2 DNA MER2_type -10 2708 2616 259 128 0 0 chr10 76374555 76374594 -69214694 - Tigger2 DNA MER2_type -2679 39 1 * 23 54 0 0 chr10 76374746 76374783 -69214505 + AT_rich Low_complexity Low_complexity 1 37 0 361 345 173 8 chr10 76375716 76375971 -69213317 + MER102b DNA MER1_type 28 324 -17 1534 299 91 48 chr10 76375984 76376778 -69212510 - L1MEd LINE L1 -4737 1573 815 369 0 0 0 chr10 76376778 76376819 -69212469 + (TG)n Simple_repeat Simple_repeat 1 41 0 1534 299 91 48 chr10 76376819 76377508 -69211780 - L1MEd LINE L1 -5495 815 3 350 256 23 0 chr10 76377711 76377797 -69211491 - MIR SINE MIR -64 144 57 1106 202 43 32 chr10 76377880 76378133 -69211155 - MIR SINE MIR 0 262 7 477 158 0 0 chr10 76378137 76378219 -69211069 + AluS SINE Alu 227 308 -4 198 194 0 0 chr10 76379028 76379064 -69210224 + MIR3 SINE MIR 165 200 -8 372 258 48 16 chr10 76379826 76379950 -69209338 - L2 LINE L2 -2 3270 3143 181 291 165 0 chr10 76380111 76380190 -69209098 - MIR SINE MIR -87 121 30 217 322 0 0 chr10 76380200 76380270 -69209018 + MIR SINE MIR 80 150 -58 183 156 0 0 chr10 76380619 76380651 -69208637 + (TCCA)n Simple_repeat Simple_repeat 3 34 0 591 273 6 18 chr10 76380775 76380940 -69208348 - MER103 DNA DNA -2 164 2 816 274 47 8 chr10 76381582 76381816 -69207472 + MIR SINE MIR 12 254 -8 519 214 207 0 chr10 76381816 76381961 -69207327 + MER96 DNA MER1_type 1 175 0 1582 139 104 21 chr10 76382732 76383020 -69206268 + AluJo SINE Alu 1 312 0 683 179 167 6 chr10 76383085 76383247 -69206041 + MER5A DNA MER1_type 2 189 0 611 254 12 35 chr10 76383257 76383430 -69205858 + MER5B DNA MER1_type 3 171 -7 523 266 40 17 chr10 76383652 76383825 -69205463 + MER5B DNA MER1_type 2 178 0 498 250 23 47 chr10 76383902 76384074 -69205214 - MER5B DNA MER1_type -3 175 8 240 315 34 60 chr10 76384896 76385045 -69204243 + MIR3 SINE MIR 9 153 -55 402 301 52 0 chr10 76385079 76385232 -69204056 - MER117 DNA MER1_type -30 167 7 305 341 36 0 chr10 76385281 76385419 -69203869 - MIR3 SINE MIR -55 153 11 344 289 74 7 chr10 76385669 76385804 -69203484 + L2 LINE L2 3129 3272 0 377 148 0 0 chr10 76385833 76385894 -69203394 + MIR SINE MIR 57 117 -145 2289 112 53 0 chr10 76386097 76386473 -69202815 + L1MA4 LINE L1 5653 6048 -252 1847 143 0 0 chr10 76386473 76386739 -69202549 + AluSp SINE Alu 13 278 -35 2164 119 3 0 chr10 76386739 76387049 -69202239 + AluSp SINE Alu 1 311 -2 1204 100 0 12 chr10 76387050 76387220 -69202068 + AluSg/x SINE Alu 135 302 -10 1425 128 22 0 chr10 76387223 76387450 -69201838 + L1MA5 LINE L1 6068 6299 -1 246 217 203 16 chr10 76387841 76387952 -69201336 + MIR SINE MIR 9 135 -73 602 26 0 13 chr10 76387952 76388029 -69201259 + (TTTTC)n Simple_repeat Simple_repeat 4 79 0 2106 116 6 3 chr10 76388039 76388350 -69200938 - AluSx SINE Alu 0 312 1 302 314 33 65 chr10 76388350 76388497 -69200791 + MIR SINE MIR 115 256 -6 486 259 22 0 chr10 76389460 76389599 -69199689 + MER117 DNA MER1_type 9 150 -47 442 345 52 39 chr10 76390685 76391218 -69198070 - L2 LINE L2 0 3313 2778 2909 160 10 25 chr10 76391221 76391740 -69197548 - L1MB2 LINE L1 0 6171 5661 746 211 22 15 chr10 76392245 76392464 -69196824 - LTR16C LTR ERVL -6 485 219 621 309 42 0 chr10 76392634 76392851 -69196437 - LTR16C LTR ERVL -264 227 2 3700 165 12 20 chr10 76392946 76393600 -69195688 + L1MB5 LINE L1 5526 6174 0 212 265 59 0 chr10 76394355 76394423 -69194865 + MIR SINE MIR 68 139 -69 1897 129 0 14 chr10 76394591 76394886 -69194402 + AluSx SINE Alu 1 291 -21 277 331 71 26 chr10 76395053 76395207 -69194081 + MIR3 SINE MIR 33 193 -15 647 231 46 18 chr10 76395215 76395413 -69193875 + MIR SINE MIR 48 251 -11 367 333 169 5 chr10 76395522 76395735 -69193553 + MIR SINE MIR 14 261 -1 211 240 116 0 chr10 76395853 76395925 -69193363 - MIR SINE MIR -63 145 86 492 196 118 0 chr10 76396052 76396154 -69193134 - MER81 DNA DNA 0 114 1 1722 224 55 61 chr10 76396460 76396950 -69192338 - MLT1K LTR MaLR 0 588 102 361 266 26 35 chr10 76397825 76397938 -69191350 - MIR SINE MIR -76 132 21 193 164 164 0 chr10 76399291 76399346 -69189942 - MIR SINE MIR -120 142 79 295 233 0 0 chr10 76399994 76400054 -69189234 - L2 LINE L2 0 3272 3213 417 289 38 31 chr10 76400107 76400266 -69189022 + MIR3 SINE MIR 30 189 -19 202 205 161 5 chr10 76400857 76400973 -69188315 + MIR3 SINE MIR 14 198 -10 479 186 10 135 chr10 76401135 76401328 -69187960 + L3 LINE CR1 1315 1483 -94 392 258 77 44 chr10 76401367 76401549 -69187739 - MER5A DNA MER1_type 0 189 2 342 0 0 0 chr10 76402539 76402577 -69186711 + (TC)n Simple_repeat Simple_repeat 1 38 0 300 53 0 0 chr10 76402576 76402614 -69186674 + (CA)n Simple_repeat Simple_repeat 1 38 0 * 595 283 89 11 chr10 76402808 76402988 -69186300 + MIR SINE MIR 67 260 -2 452 323 94 15 chr10 76403755 76403956 -69185332 - MIR SINE MIR 0 262 46 262 311 47 61 chr10 76403984 76404132 -69185156 + MIR SINE MIR 117 262 0 246 341 174 0 chr10 76404116 76404248 -69185040 + L2 LINE L2 3114 3268 -4 * 258 32 0 0 chr10 76405242 76405273 -69184015 + (TG)n Simple_repeat Simple_repeat 2 32 0 320 287 49 15 chr10 76405304 76405477 -69183811 - MIR SINE MIR -51 211 33 329 255 128 26 chr10 76406785 76406944 -69182344 + MIR SINE MIR 74 260 -2 1814 152 0 71 chr10 76406954 76407290 -69181998 - AluJb SINE Alu 0 312 1 255 266 73 37 chr10 76407563 76407672 -69181616 - MIR3 SINE MIR -35 173 61 217 246 70 0 chr10 76408832 76408889 -69180399 - MIR SINE MIR -97 165 105 724 268 38 9 chr10 76409356 76409569 -69179719 - L1ME3A LINE L1 -27 6143 5925 242 269 65 43 chr10 76409648 76409741 -69179547 + MIR SINE MIR 10 104 -158 359 260 24 55 chr10 76410033 76410160 -69179128 - MIR SINE MIR -64 198 76 181 191 119 0 chr10 76410916 76410958 -69178330 - L2 LINE L2 0 3272 3226 214 343 98 72 chr10 76411038 76411467 -69177821 + L2 LINE L2 2827 3266 -6 2275 150 97 66 chr10 76411728 76412084 -69177204 + MLT1D LTR MaLR 1 377 -128 1962 125 30 7 chr10 76412084 76412389 -69176899 - AluSx SINE Alu 0 312 1 2275 150 97 66 chr10 76412389 76412518 -69176770 + MLT1D LTR MaLR 377 501 -4 299 281 24 0 chr10 76413083 76413165 -69176123 - L2 LINE L2 0 3272 3189 373 304 101 0 chr10 76413915 76414063 -69175225 - MIR SINE MIR -58 204 42 357 264 270 17 chr10 76414829 76415007 -69174281 + MIR SINE MIR 3 225 -37 244 202 0 0 chr10 76415154 76415207 -69174081 + MIR SINE MIR 100 146 -62 491 228 167 31 chr10 76416255 76416417 -69172871 - MER5A DNA MER1_type 0 189 6 297 307 92 12 chr10 76416529 76416692 -69172596 + MER91A DNA MER1_type 1 176 -20 420 55 0 0 chr10 76417198 76417253 -69172035 + (CA)n Simple_repeat Simple_repeat 1 55 0 371 340 91 0 chr10 76417955 76418130 -69171158 - MIR SINE MIR -15 247 57 237 333 11 11 chr10 76418197 76418287 -69171001 - L3 LINE CR1 -173 1404 1315 2221 108 0 6 chr10 76419901 76420215 -69169073 - AluSx SINE Alu 0 312 1 332 292 62 49 chr10 76420375 76420519 -69168769 + MIR SINE MIR 28 173 -89 208 304 44 74 chr10 76420613 76420709 -69168579 - L2 LINE L2 -79 3193 3101 405 0 0 0 chr10 76420709 76420754 -69168534 + (CA)n Simple_repeat Simple_repeat 1 45 0 208 304 44 74 chr10 76420754 76420792 -69168496 - L2 LINE L2 -171 3101 3063 354 324 38 22 chr10 76424940 76425145 -69164143 - MIR SINE MIR -20 242 35 382 269 106 0 chr10 76425553 76425657 -69163631 - MIR3 SINE MIR -4 204 90 218 349 92 20 chr10 76425956 76426108 -69163180 - MIR SINE MIR -44 218 56 215 100 0 25 chr10 76426624 76426664 -69162624 + (TC)n Simple_repeat Simple_repeat 2 40 0 419 326 12 22 chr10 76426841 76427070 -69162218 + CT-rich Low_complexity Low_complexity 1 226 0 191 330 80 0 chr10 76427973 76428061 -69161227 - MIR SINE MIR -87 121 27 1757 211 27 0 chr10 76428866 76429198 -69160090 - MER58B DNA MER1_type 0 341 1 268 282 71 0 chr10 76429200 76429285 -69160003 - MIR3 SINE MIR -21 187 97 468 224 48 95 chr10 76429387 76429599 -69159689 + MIR SINE MIR 7 207 -1 185 339 104 0 chr10 76430309 76430424 -69158864 - MIR SINE MIR -117 145 19 253 281 45 11 chr10 76430850 76430939 -69158349 - MIR SINE MIR -65 143 52 904 232 174 9 chr10 76432747 76433075 -69156213 - L2 LINE L2 0 3313 2932 400 341 80 49 chr10 76433511 76433775 -69155513 - L2 LINE L2 -19 3253 2982 295 210 12 74 chr10 76433768 76433849 -69155439 + L2 LINE L2 3238 3313 0 * 278 226 0 0 chr10 76433837 76433899 -69155389 - L2 LINE L2 -286 2986 2925 * 251 234 94 0 chr10 76434029 76434093 -69155195 + L2 LINE L2 3242 3311 -2 627 297 65 63 chr10 76434180 76434625 -69154663 - L2 LINE L2 -2 3270 2825 293 294 62 75 chr10 76436556 76436702 -69152586 - L3b LINE CR1 -8 1575 1432 300 323 81 25 chr10 76436704 76436865 -69152423 + MER117 DNA MER1_type 1 170 -27 281 310 92 35 chr10 76437299 76437441 -69151847 + MIR SINE MIR 103 252 -10 1550 177 0 31 chr10 76437478 76437809 -69151479 + AluJo SINE Alu 28 349 0 367 182 185 2 chr10 76439324 76439465 -69149823 - MIR SINE MIR -61 147 6 276 323 143 19 chr10 76439852 76440013 -69149275 - MIR3 SINE MIR -24 184 4 206 350 38 0 chr10 76440135 76440215 -69149073 + MIR3 SINE MIR 76 158 -50 440 174 304 14 chr10 76440217 76440355 -69148933 - MER5B DNA MER1_type 0 178 1 226 321 110 0 chr10 76441274 76441362 -69147926 - MIR SINE MIR -10 252 148 1591 160 7 28 chr10 76441362 76441650 -69147638 - AluJo SINE Alu 0 312 31 226 321 110 0 chr10 76441650 76441670 -69147618 - MIR SINE MIR -114 148 132 268 301 46 56 chr10 76441932 76442128 -69147160 - MIR SINE MIR -42 220 27 268 276 0 11 chr10 76442581 76442668 -69146620 - HAL1 LINE L1 -954 1553 1468 2028 116 51 0 chr10 76443501 76443794 -69145494 + AluSx SINE Alu 1 308 -4 450 260 116 47 chr10 76443850 76444127 -69145161 - HAL1 LINE L1 -1 2506 2211 1939 262 155 51 chr10 76444275 76445165 -69144123 - HAL1 LINE L1 -307 2200 1404 2109 120 0 16 chr10 76445165 76445482 -69143806 - AluSx SINE Alu 0 312 1 1939 262 155 51 chr10 76445482 76446534 -69142754 - HAL1 LINE L1 -1103 1404 11 198 245 38 0 chr10 76446547 76446600 -69142688 - L2 LINE L2 -4 3268 3214 236 263 132 0 chr10 76447430 76447506 -69141782 - L3b LINE CR1 -197 1386 1301 398 269 0 14 chr10 76447692 76447811 -69141477 + MIR SINE MIR 30 143 -67 269 365 0 8 chr10 76448469 76448595 -69140693 + CT-rich Low_complexity Low_complexity 3 127 0 217 127 0 127 chr10 76449270 76449341 -69139947 + (CCCCAA)n Simple_repeat Simple_repeat 4 65 0 600 258 16 67 chr10 76450286 76450480 -69138808 + MIR3 SINE MIR 11 194 -14 426 319 72 48 chr10 76450824 76450919 -69138369 - MIR SINE MIR -3 259 168 1869 79 0 0 chr10 76450919 76451160 -69138128 - AluSg/x SINE Alu 0 312 72 426 319 72 48 chr10 76451160 76451315 -69137973 - MIR SINE MIR -94 168 3 402 195 0 0 chr10 76451960 76452042 -69137246 - L1 LINE L1 -2583 3563 3482 477 272 72 13 chr10 76452381 76452710 -69136578 - LTR33 LTR ERVL -84 437 40 427 285 124 23 chr10 76452851 76453072 -69136216 - MIR SINE MIR -27 235 4 518 244 69 25 chr10 76454276 76454436 -69134852 - MIR SINE MIR -15 247 81 253 260 14 58 chr10 76454718 76454814 -69134474 - MIR SINE MIR -105 103 9 445 315 19 19 chr10 76456613 76456775 -69132513 - MIR3 SINE MIR -1 207 46 415 250 10 0 chr10 76456810 76456906 -69132382 + MIR SINE MIR 48 144 -118 1024 133 7 0 chr10 76457079 76457230 -69132058 - FAM SINE Alu -16 169 18 314 253 11 11 chr10 76457837 76457924 -69131364 + (TG)n Simple_repeat Simple_repeat 2 88 0 558 261 246 14 chr10 76462486 76462697 -69126591 - MIR SINE MIR 0 262 3 276 342 25 25 chr10 76464129 76464290 -69124998 + L2 LINE L2 2924 3084 -188 340 214 17 55 chr10 76464681 76464802 -69124486 - MIR SINE MIR -79 129 38 386 240 67 47 chr10 76466182 76466332 -69122956 + MIR SINE MIR 110 262 0 215 359 16 0 chr10 76466589 76466653 -69122635 + L2 LINE L2 3249 3313 0 415 306 31 19 chr10 76466666 76466826 -69122462 - MER5A DNA MER1_type -1 188 27 381 308 139 0 chr10 76467668 76467840 -69121448 + MER117 DNA MER1_type 2 197 0 388 378 53 10 chr10 76469091 76469300 -69119988 + MIR SINE MIR 21 238 -24 190 237 0 0 chr10 76469353 76469391 -69119897 + MIR SINE MIR 3 40 -222 1389 167 54 11 chr10 76469398 76469716 -69119572 + MER33 DNA MER1_type 1 315 -9 408 297 189 11 chr10 76469725 76469900 -69119388 + MIR SINE MIR 32 237 -25 288 340 54 20 chr10 76469920 76470067 -69119221 - L2 LINE L2 -5 3267 3116 347 349 74 25 chr10 76470246 76470682 -69118606 - L2 LINE L2 -222 3050 2599 436 253 220 11 chr10 76470912 76471094 -69118194 - MIR SINE MIR -14 248 29 629 197 16 0 chr10 76471114 76471241 -69118047 + MER5A DNA MER1_type 1 129 -60 324 154 0 0 chr10 76471232 76471284 -69118004 - MER5A DNA MER1_type -137 52 1 * 394 158 7 151 chr10 76471356 76471495 -69117793 + MER106A DNA MER1_type 117 235 -1 297 0 0 0 chr10 76471725 76471758 -69117530 + (TG)n Simple_repeat Simple_repeat 2 34 0 259 304 138 0 chr10 76472526 76472664 -69116624 - MER117 DNA MER1_type -37 160 4 213 194 0 69 chr10 76473747 76473819 -69115469 + (CACCT)n Simple_repeat Simple_repeat 3 69 0 497 292 95 19 chr10 76473953 76474225 -69115063 - L1ME3A LINE L1 -224 5946 5658 446 328 0 8 chr10 76474282 76474407 -69114881 - MIR SINE MIR -119 143 20 348 94 0 0 chr10 76474493 76474546 -69114742 + (TTCA)n Simple_repeat Simple_repeat 1 53 0 503 308 56 20 chr10 76474552 76474747 -69114541 - L2 LINE L2 -11 3302 3101 684 187 122 0 chr10 76475534 76475673 -69113615 + MIR SINE MIR 85 240 -22 203 0 0 36 chr10 76475676 76475704 -69113584 + (TTA)n Simple_repeat Simple_repeat 1 27 0 2164 101 7 0 chr10 76476310 76476598 -69112690 - AluSg SINE Alu -20 290 1 705 261 70 33 chr10 76476994 76477235 -69112053 - MIR SINE MIR 0 262 13 1082 130 0 38 chr10 76477900 76478084 -69111204 + FRAM SINE Alu 1 176 0 1146 269 105 35 chr10 76478407 76478891 -69110397 - MER113 DNA MER1_type? -3 518 1 199 191 0 118 chr10 76478962 76479030 -69110258 + L2 LINE L2 3210 3269 -3 2051 200 72 29 chr10 76479494 76479978 -69109310 - MLT1D LTR MaLR 0 505 1 1108 310 75 8 chr10 76480302 76480938 -69108350 + L1M3 LINE L1 4783 5457 -726 993 158 71 55 chr10 76480951 76481019 -69108269 + MER58D DNA MER1_type 26 91 -2329 1255 210 100 0 chr10 76481019 76481300 -69107988 + AluJo SINE Alu 1 309 -3 993 158 71 55 chr10 76481300 76481485 -69107803 + MER58D DNA MER1_type 91 283 -103 324 200 0 0 chr10 76481486 76481556 -69107732 + CT-rich Low_complexity Low_complexity 2 71 0 2095 108 10 7 chr10 76481557 76481854 -69107434 - AluSp SINE Alu -15 298 1 489 176 118 0 chr10 76481854 76481956 -69107332 + MER58D DNA MER1_type 271 384 -2 338 213 0 0 chr10 76481990 76482065 -69107223 - MER116 DNA Mariner 0 80 6 185 200 0 0 chr10 76482307 76482342 -69106946 + MIR SINE MIR 215 249 -13 206 277 15 66 chr10 76482437 76482574 -69106714 + L2 LINE L2 2930 3059 -213 567 224 15 22 chr10 76483449 76483583 -69105705 - MIR SINE MIR -102 160 28 373 279 31 47 chr10 76483598 76483727 -69105561 - MIR SINE MIR -70 192 66 192 320 13 13 chr10 76484482 76484560 -69104728 - MIR3 SINE MIR -19 189 112 304 279 153 0 chr10 76484940 76485051 -69104237 - L2 LINE L2 0 3313 3186 282 279 0 0 chr10 76486038 76486106 -69103182 - L2 LINE L2 -6 3266 3199 303 277 46 46 chr10 76486254 76486384 -69102904 - L1ME4a LINE L1 -26 6095 5966 381 251 98 41 chr10 76486544 76486839 -69102449 + L1MC5 LINE L1 7613 7924 -37 307 289 28 59 chr10 76486902 76487098 -69102190 + MIR3 SINE MIR 15 202 -6 2262 110 3 0 chr10 76487170 76487480 -69101808 - AluSq SINE Alu -2 311 1 630 221 114 13 chr10 76487544 76487693 -69101595 - MER103 DNA DNA -1 165 2 2204 100 0 3 chr10 76487693 76487993 -69101295 - AluSc SINE Alu -9 300 2 226 310 168 9 chr10 76488382 76488495 -69100793 + MIR SINE MIR 16 146 -62 * 794 299 9 0 chr10 76488488 76488702 -69100586 - MIR SINE MIR 0 262 47 347 129 0 43 chr10 76488992 76489062 -69100226 - MIR SINE MIR -57 151 85 568 248 33 7 chr10 76489516 76489665 -69099623 - MIR SINE MIR -61 147 34 195 277 96 21 chr10 76489966 76490060 -69099228 - MIR SINE MIR -50 212 112 572 291 36 0 chr10 76490927 76491092 -69098196 + MIR SINE MIR 36 206 -56 688 240 7 7 chr10 76491157 76491307 -69097981 + MIR SINE MIR 8 157 -105 1018 153 12 0 chr10 76491314 76491484 -69097804 + FRAM SINE Alu 1 172 -4 575 176 76 0 chr10 76492269 76492388 -69096900 - L1MB4 LINE L1 -2 6178 6051 21 0 0 0 chr10 76492421 76492442 -69096846 + AT_rich Low_complexity Low_complexity 1 21 0 483 269 151 46 chr10 76492472 76492498 -69096790 - L1ME4a LINE L1 -69 6052 6030 1300 173 23 0 chr10 76492498 76492712 -69096576 + MER20 DNA MER1_type 1 219 0 483 269 151 46 chr10 76492712 76493057 -69096231 - L1ME4a LINE L1 -91 6030 5642 606 239 188 26 chr10 76493719 76494028 -69095260 - L2 LINE L2 0 3313 2955 748 264 39 10 chr10 76494507 76494715 -69094573 + MIR SINE MIR 48 261 -1 2001 158 0 0 chr10 76494799 76495110 -69094178 + AluJb SINE Alu 1 311 -1 572 307 33 19 chr10 76495143 76495358 -69093930 - MIR SINE MIR -23 239 22 249 33 0 0 chr10 76496465 76496495 -69092793 + (TCTCCC)n Simple_repeat Simple_repeat 5 34 0 208 311 46 20 chr10 76496710 76496861 -69092427 + L2 LINE L2 1940 2094 -1220 405 0 0 0 chr10 76497130 76497175 -69092113 + (TG)n Simple_repeat Simple_repeat 1 45 0 1873 139 7 0 chr10 76497201 76497481 -69091807 - AluSx SINE Alu -30 282 1 614 312 75 0 chr10 76497650 76497849 -69091439 + MIR SINE MIR 49 262 0 879 242 94 0 chr10 76498688 76498911 -69090377 - MIR SINE MIR -6 256 13 246 257 122 65 chr10 76498899 76499113 -69090175 + L2 LINE L2 3088 3313 0 * 282 56 0 0 chr10 76499406 76499442 -69089846 + (TG)n Simple_repeat Simple_repeat 2 37 0 2168 93 7 0 chr10 76500038 76500327 -69088961 - AluSx SINE Alu -21 291 1 180 214 0 0 chr10 76500332 76500374 -69088914 + L2 LINE L2 3230 3271 -1 753 233 34 34 chr10 76501074 76501280 -69088008 - MIR SINE MIR 0 262 57 1018 273 82 25 chr10 76502078 76502211 -69087077 + MER113 DNA MER1_type? 40 164 -357 219 103 0 0 chr10 76502211 76502250 -69087038 + (ACTAG)n Simple_repeat Simple_repeat 5 43 0 1018 273 82 25 chr10 76502250 76502516 -69086772 + MER113 DNA MER1_type? 164 462 -59 304 304 16 24 chr10 76503743 76503868 -69085420 - MER5B DNA MER1_type -5 173 50 218 300 0 17 chr10 76503930 76503990 -69085298 + L2 LINE L2 3204 3262 -10 597 262 94 21 chr10 76504132 76504323 -69084965 + MIR SINE MIR 43 247 -15 309 243 65 47 chr10 76504728 76504897 -69084391 - Charlie7 DNA MER1_type 0 2612 2441 1987 117 30 0 chr10 76504897 76505195 -69084093 + AluSq SINE Alu 1 307 -6 180 245 0 0 chr10 76505992 76506045 -69083243 + (TG)n Simple_repeat Simple_repeat 2 54 0 1952 120 33 13 chr10 76506231 76506530 -69082758 + AluSx SINE Alu 1 305 -7 401 255 39 0 chr10 76506556 76506658 -69082630 - Charlie7 DNA MER1_type -2506 106 1 372 252 9 37 chr10 76507017 76507124 -69082164 + MIR SINE MIR 23 126 -136 331 326 27 14 chr10 76507292 76507439 -69081849 - MLT1I LTR MaLR -189 220 72 233 343 21 29 chr10 76508568 76508708 -69080580 + L2 LINE L2 3134 3272 0 575 313 135 34 chr10 76510177 76510803 -69078485 - L2 LINE L2 0 3313 2599 281 385 21 7 chr10 76511102 76511245 -69078043 + MIR3 SINE MIR 49 193 -15 617 278 67 5 chr10 76511533 76511727 -69077561 + MIR SINE MIR 37 242 -20 1070 132 0 0 chr10 76511735 76511894 -69077394 + FRAM SINE Alu 4 162 -14 324 0 0 0 chr10 76511913 76511949 -69077339 + (TTA)n Simple_repeat Simple_repeat 3 38 0 433 260 0 10 chr10 76511950 76512050 -69077238 - MIR SINE MIR -59 149 51 252 0 0 0 chr10 76512575 76512603 -69076685 + (A)n Simple_repeat Simple_repeat 1 28 0 1797 229 44 7 chr10 76512996 76513450 -69075838 + Charlie4a DNA MER1_type 36 506 -2 246 32 0 0 chr10 76514550 76514581 -69074707 + (ATG)n Simple_repeat Simple_repeat 2 32 0 209 277 43 53 chr10 76515562 76515656 -69073632 + MIR SINE MIR 59 151 -57 2014 130 3 0 chr10 76515684 76515976 -69073312 - AluSx SINE Alu -19 293 1 190 259 35 0 chr10 76516102 76516160 -69073128 - MIR SINE MIR -68 140 81 681 251 212 21 chr10 76516288 76516618 -69072670 - L2 LINE L2 -1 3312 2920 1448 218 78 47 chr10 76516758 76517184 -69072104 + L1MB5 LINE L1 5730 6168 -6 1848 179 0 0 chr10 76517192 76517500 -69071788 - AluJo SINE Alu -4 308 1 785 264 79 22 chr10 76517600 76517877 -69071411 - L2 LINE L2 -735 2579 2287 341 291 76 52 chr10 76517879 76518051 -69071237 + MER63A DNA MER1_type 7 182 -28 286 294 4 140 chr10 76518077 76518141 -69071147 - L2 LINE L2 -1055 2259 2188 1690 157 10 13 chr10 76518141 76518446 -69070842 + AluJb SINE Alu 1 304 -8 286 294 4 140 chr10 76518446 76518660 -69070628 - L2 LINE L2 -1126 2188 2019 799 266 77 18 chr10 76519031 76519317 -69069971 + L1ME1 LINE L1 5847 6149 -17 224 344 69 8 chr10 76519506 76519637 -69069651 - L2 LINE L2 -508 2806 2668 208 341 7 7 chr10 76519929 76520009 -69069279 + CT-rich Low_complexity Low_complexity 1 83 -52 2830 101 25 41 chr10 76520009 76520444 -69068844 - MSTC LTR MaLR 0 428 1 208 341 7 7 chr10 76520444 76520498 -69068790 + CT-rich Low_complexity Low_complexity 82 135 0 193 286 118 0 chr10 76520923 76521042 -69068246 - MIR3 SINE MIR -74 134 2 298 229 11 45 chr10 76522755 76522941 -69066347 + GA-rich Low_complexity Low_complexity 1 192 -382 1728 137 122 18 chr10 76522941 76523269 -69066019 - MLT1A1 LTR MaLR -3 362 1 298 229 11 45 chr10 76523269 76523350 -69065938 + GA-rich Low_complexity Low_complexity 192 574 0 1761 140 46 7 chr10 76523416 76523701 -69065587 + AluJo SINE Alu 1 296 -16 214 333 111 15 chr10 76523723 76523858 -69065430 - MIR3 SINE MIR -34 174 27 534 297 135 4 chr10 76524569 76524798 -69064490 - MIR SINE MIR 0 262 4 454 262 37 0 chr10 76525304 76525411 -69063877 - MIR SINE MIR -89 173 63 232 340 110 26 chr10 76526719 76526910 -69062378 + MIR SINE MIR 2 208 -54 1021 128 20 67 chr10 76527582 76527648 -69061640 - MER5A DNA MER1_type -3 186 118 2281 89 0 19 chr10 76527648 76527962 -69061326 + AluSg SINE Alu 3 310 0 1021 128 20 67 chr10 76527962 76528090 -69061198 - MER5A DNA MER1_type -71 118 1 609 226 40 57 chr10 76528100 76528277 -69061011 - MER5B DNA MER1_type -2 176 3 310 313 88 7 chr10 76528359 76528506 -69060782 - MER5B DNA MER1_type -6 172 14 615 227 74 17 chr10 76528718 76528894 -69060394 + MER5A DNA MER1_type 1 186 -3 1773 141 3 60 chr10 76528975 76529296 -69059992 + AluSx SINE Alu 1 304 0 222 336 8 67 chr10 76529522 76529570 -69059718 + MIR SINE MIR 2 51 -211 2212 101 3 7 chr10 76529570 76529878 -69059410 - AluSx SINE Alu -5 307 1 222 336 8 67 chr10 76529878 76529963 -69059325 + MIR SINE MIR 51 127 -135 200 288 61 0 chr10 76530194 76530260 -69059028 + MIR SINE MIR 186 255 -7 271 298 12 0 chr10 76530278 76530362 -69058926 + L1MC4a LINE L1 5829 5913 -1895 224 263 0 18 chr10 76532604 76532661 -69056627 + C-rich Low_complexity Low_complexity 1 56 0 362 139 139 0 chr10 76534260 76534346 -69054942 - MLT1K LTR MaLR 0 588 491 813 107 8 8 chr10 76534359 76534480 -69054808 + AluSq/x SINE Alu 1 121 -191 555 267 185 9 chr10 76534665 76534897 -69054391 - MLT1K LTR MaLR -232 356 84 186 222 0 0 chr10 76536096 76536132 -69053156 + MIR SINE MIR 109 144 -118 659 231 0 35 chr10 76536758 76536927 -69052361 + MER8 DNA MER2_type 77 239 0 590 221 45 26 chr10 76536936 76537090 -69052198 - MIR SINE MIR -92 170 14 331 359 6 11 chr10 76537498 76537768 -69051520 + (TG)n Simple_repeat Simple_repeat 1 268 0 189 74 0 0 chr10 76538035 76538062 -69051226 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 502 344 68 56 chr10 76538062 76538351 -69050937 - L2 LINE L2 -13 3259 2964 1586 163 0 75 chr10 76538351 76538671 -69050617 + AluJb SINE Alu 1 296 -16 502 344 68 56 chr10 76538671 76538736 -69050552 - L2 LINE L2 -308 2964 2901 471 233 139 39 chr10 76539646 76539826 -69049462 + MIR SINE MIR 57 254 -8 221 316 35 18 chr10 76539845 76539959 -69049329 + MIR3 SINE MIR 10 125 -83 450 313 91 29 chr10 76540781 76540989 -69048299 + MIR SINE MIR 19 239 -23 671 238 12 0 chr10 76541262 76541422 -69047866 + MER45A DNA AcHobo 17 178 0 1134 253 75 39 chr10 76541547 76542093 -69047195 - MLT1G LTR MaLR 0 590 25 222 336 17 34 chr10 76542897 76543016 -69046272 - MIR SINE MIR -75 133 17 347 331 72 12 chr10 76543053 76543219 -69046069 + MIR3 SINE MIR 17 192 -16 312 342 99 31 chr10 76543555 76543938 -69045350 - L2 LINE L2 -42 3271 2863 213 232 74 32 chr10 76544036 76544131 -69045157 - L2 LINE L2 -654 2660 2562 417 340 92 0 chr10 76544304 76544489 -69044799 + MIR SINE MIR 50 251 -11 207 69 0 0 chr10 76545019 76545048 -69044240 + (CA)n Simple_repeat Simple_repeat 2 30 0 398 114 14 0 chr10 76545348 76545418 -69043870 + (GA)n Simple_repeat Simple_repeat 2 72 0 406 305 28 21 chr10 76545777 76545918 -69043370 - MIR SINE MIR -114 148 7 382 245 39 20 chr10 76546014 76546116 -69043172 + MIR3 SINE MIR 74 177 -31 386 285 59 27 chr10 76546671 76546857 -69042431 + MER112 DNA MER1_type 37 228 -32 2012 107 43 10 chr10 76547051 76547350 -69041938 - AluSc SINE Alu 0 309 1 564 297 47 16 chr10 76547351 76547391 -69041897 + MIR SINE MIR 63 100 -162 1213 268 113 48 chr10 76547391 76547869 -69041419 - MLT1J LTR MaLR 0 511 3 564 297 47 16 chr10 76547869 76548020 -69041268 + MIR SINE MIR 100 260 -2 400 307 113 39 chr10 76548006 76548237 -69041051 - MIR SINE MIR 0 262 15 * 287 282 74 63 chr10 76548473 76548626 -69040662 + MIR SINE MIR 28 192 -62 357 267 40 23 chr10 76548851 76549027 -69040261 + (CCCCG)n Simple_repeat Simple_repeat 2 180 0 1112 232 142 35 chr10 76549883 76550305 -69038983 - MLT1C LTR MaLR 0 467 1 766 274 0 0 chr10 76550691 76550870 -69038418 + MIR SINE MIR 84 262 0 1197 136 0 0 chr10 76550942 76551119 -69038169 + AluSg/x SINE Alu 118 294 -16 193 238 0 0 chr10 76551142 76551184 -69038104 + L2 LINE L2 3210 3251 -21 588 281 6 19 chr10 76551714 76551874 -69037414 - MIR SINE MIR 0 262 105 197 239 26 18 chr10 76551907 76552020 -69037268 + CT-rich Low_complexity Low_complexity 1 114 0 575 258 15 0 chr10 76552146 76552278 -69037010 - L2 LINE L2 -1 3312 3179 374 290 134 37 chr10 76552320 76552537 -69036751 + L2 LINE L2 2475 2712 -602 267 282 100 18 chr10 76552567 76552737 -69036551 - L2 LINE L2 -294 3019 2836 233 276 112 0 chr10 76553046 76553144 -69036144 + MER117 DNA MER1_type 53 161 -36 213 39 0 0 chr10 76554448 76554474 -69034814 + (GA)n Simple_repeat Simple_repeat 2 27 0 * 471 35 0 0 chr10 76554473 76554530 -69034758 + (TG)n Simple_repeat Simple_repeat 1 57 0 583 318 42 38 chr10 76555580 76555816 -69033472 + MIR SINE MIR 18 254 -8 246 356 60 52 chr10 76556406 76556570 -69032718 + L2 LINE L2 3029 3197 -116 2074 125 0 7 chr10 76556570 76556867 -69032421 - AluSc SINE Alu -14 295 1 246 356 60 52 chr10 76556867 76556969 -69032319 + L2 LINE L2 3197 3297 -16 1273 58 0 0 chr10 76556974 76557129 -69032159 + AluSg/x SINE Alu 137 291 -21 186 200 22 22 chr10 76557838 76557883 -69031405 - L2 LINE L2 -556 2758 2714 2102 112 13 16 chr10 76558078 76558383 -69030905 - AluSx SINE Alu -8 304 1 577 214 39 73 chr10 76558840 76559018 -69030270 + MIR SINE MIR 32 203 -59 356 312 112 24 chr10 76559062 76559357 -69029931 - L2 LINE L2 -13 3259 2939 215 379 58 29 chr10 76559792 76559966 -69029322 + MIR3 SINE MIR 26 204 -4 256 305 105 0 chr10 76560247 76560342 -69028946 - L2 LINE L2 -2 3311 3207 572 284 29 39 chr10 76560725 76560929 -69028359 + MIR SINE MIR 15 216 -46 479 181 14 101 chr10 76561673 76561811 -69027477 - MIR SINE MIR -42 220 95 289 319 17 17 chr10 76562409 76562528 -69026760 + MIR SINE MIR 23 141 -67 640 227 15 81 chr10 76562615 76562813 -69026475 - MIR SINE MIR -22 240 56 2289 95 3 7 chr10 76563019 76563324 -69025964 - AluSx SINE Alu -8 304 1 2121 122 0 0 chr10 76563462 76563757 -69025531 + AluSx SINE Alu 1 295 -17 970 179 6 0 chr10 76564879 76565047 -69024241 - FRAM SINE Alu -7 169 1 405 258 114 0 chr10 76565359 76565491 -69023797 - MIR3 SINE MIR -6 202 56 517 341 49 16 chr10 76565923 76566169 -69023119 - L2 LINE L2 -5 3267 3014 295 330 27 18 chr10 76567091 76567203 -69022085 - MIR SINE MIR -64 144 32 292 319 53 102 chr10 76567187 76567472 -69021816 + L2 LINE L2 2809 3079 -193 * 1618 134 29 7 chr10 76567589 76567864 -69021424 + AluSx SINE Alu 7 287 -25 254 292 0 62 chr10 76567878 76568056 -69021232 + CT-rich Low_complexity Low_complexity 5 171 0 417 317 11 33 chr10 76568084 76568267 -69021021 + C-rich Low_complexity Low_complexity 2 180 0 266 283 0 7 chr10 76568296 76568449 -69020839 + C-rich Low_complexity Low_complexity 1 152 0 304 308 79 44 chr10 76568510 76568737 -69020551 - HAL1 LINE L1 -1291 1216 982 273 174 9 46 chr10 76568779 76568888 -69020400 + CT-rich Low_complexity Low_complexity 2 106 0 453 216 11 68 chr10 76568949 76569139 -69020149 + CT-rich Low_complexity Low_complexity 1 179 0 2085 114 3 13 chr10 76569418 76569725 -69019563 - AluSx SINE Alu -8 304 1 814 146 8 0 chr10 76570253 76570376 -69018912 + FLAM_C SINE Alu 2 125 -18 264 59 0 0 chr10 76570643 76570677 -69018611 + (CAGA)n Simple_repeat Simple_repeat 2 35 0 532 226 36 15 chr10 76570692 76570829 -69018459 + MIR SINE MIR 20 159 -103 192 270 0 68 chr10 76570821 76570895 -69018393 + L2 LINE L2 3194 3262 -10 * 236 263 18 0 chr10 76571557 76571614 -69017674 + CT-rich Low_complexity Low_complexity 1 58 0 1966 109 7 7 chr10 76572422 76572682 -69016606 + AluSq SINE Alu 25 287 -26 199 0 0 0 chr10 76572682 76572704 -69016584 + (CAAA)n Simple_repeat Simple_repeat 2 180 0 1966 109 7 7 chr10 76572704 76572717 -69016571 + AluSq SINE Alu 286 298 -15 499 267 174 5 chr10 76573064 76573251 -69016037 + MIR SINE MIR 9 217 -45 359 224 68 117 chr10 76573476 76573681 -69015607 - MIR3 SINE MIR -5 203 9 450 277 145 24 chr10 76573724 76573890 -69015398 - MER5A DNA MER1_type 0 189 4 401 359 0 21 chr10 76574120 76574265 -69015023 + MER91A DNA MER1_type 55 196 0 242 259 17 0 chr10 76576494 76576552 -69012736 - L2 LINE L2 -7 3265 3207 369 352 0 0 chr10 76577108 76577611 -69011677 + (TGG)n Simple_repeat Simple_repeat 1 503 0 236 357 0 0 chr10 76577633 76577776 -69011512 + (TGG)n Simple_repeat Simple_repeat 2 144 0 425 225 101 22 chr10 76579514 76579652 -69009636 + MIR SINE MIR 114 262 0 195 331 74 33 chr10 76579866 76579987 -69009301 - L2 LINE L2 -1 3271 3146 347 255 130 19 chr10 76580020 76580181 -69009107 - MLT1J2 LTR MaLR 0 450 272 548 252 26 32 chr10 76580602 76580757 -69008531 - MIR SINE MIR -28 234 81 393 314 17 8 chr10 76581254 76581372 -69007916 - MIR3 SINE MIR -19 189 71 221 224 51 61 chr10 76581347 76581445 -69007843 - L2 LINE L2 -42 3230 3134 * 366 300 53 12 chr10 76581483 76581644 -69007644 - MIR SINE MIR -55 153 20 697 264 57 0 chr10 76581691 76581884 -69007404 - MER63A DNA MER1_type -5 205 2 663 199 19 13 chr10 76582175 76582331 -69006957 - MIR SINE MIR -33 229 73 252 167 0 0 chr10 76582606 76582654 -69006634 + CT-rich Low_complexity Low_complexity 4 51 0 421 340 59 10 chr10 76584879 76585082 -69004206 - MIR SINE MIR -13 249 37 1682 183 3 13 chr10 76585938 76586238 -69003050 + AluJo SINE Alu 1 297 -15 416 236 55 0 chr10 76586267 76586377 -69002911 + L2 LINE L2 2717 2832 -482 199 310 89 52 chr10 76587034 76587305 -69001983 + L2 LINE L2 2804 3084 -229 930 287 55 4 chr10 76587388 76587625 -69001663 + MIR SINE MIR 12 260 -2 291 301 36 0 chr10 76587661 76587744 -69001544 + L2 LINE L2 3172 3257 -15 265 287 39 68 chr10 76588483 76588656 -69000632 + MIR SINE MIR 1 167 -41 2143 129 0 0 chr10 76588656 76588951 -69000337 + AluSx SINE Alu 1 295 -17 184 343 14 0 chr10 76589730 76589803 -68999485 + MIR3 SINE MIR 81 154 -54 231 275 0 25 chr10 76591375 76591455 -68997833 + GA-rich Low_complexity Low_complexity 2 79 0 758 260 72 17 chr10 76591872 76592107 -68997181 + MIR SINE MIR 15 262 0 205 244 70 23 chr10 76592210 76592296 -68996992 + MIR SINE MIR 85 175 -33 344 335 168 15 chr10 76592563 76592766 -68996522 + L3 LINE CR1 1344 1577 0 23 0 0 0 chr10 76592940 76592963 -68996325 + AT_rich Low_complexity Low_complexity 1 23 0 504 305 66 3 chr10 76594889 76595093 -68994195 + MIR SINE MIR 33 250 -12 382 303 14 7 chr10 76596074 76596216 -68993072 + MER117 DNA MER1_type 55 197 0 21 0 0 0 chr10 76598161 76598182 -68991106 + AT_rich Low_complexity Low_complexity 1 21 0 493 317 74 49 chr10 76598195 76598315 -68990973 - MLT1K LTR MaLR -74 514 398 2147 114 18 75 chr10 76598315 76598701 -68990587 - THE1B LTR MaLR 0 364 1 493 317 74 49 chr10 76598701 76598946 -68990342 - MLT1K LTR MaLR -190 398 140 330 321 54 52 chr10 76599144 76599529 -68989759 - L2 LINE L2 -179 3093 2706 535 275 28 17 chr10 76600207 76600385 -68988903 + Charlie8 DNA MER1_type 41 220 -2197 1311 224 153 40 chr10 76600469 76600919 -68988369 - MLT1D LTR MaLR 0 505 5 436 190 146 66 chr10 76600923 76601060 -68988228 + MIR SINE MIR 115 262 0 260 378 31 26 chr10 76603158 76603351 -68985937 - L2 LINE L2 -470 2844 2651 232 298 73 48 chr10 76605020 76605144 -68984144 - MIR SINE MIR -65 143 17 690 243 78 30 chr10 76605325 76605621 -68983667 + MER102a DNA MER1_type 4 313 -17 205 273 18 0 chr10 76605637 76605692 -68983596 - MIR3 SINE MIR -47 161 106 245 323 15 0 chr10 76605824 76605889 -68983399 - MIR SINE MIR -113 95 30 575 243 46 58 chr10 76606122 76606381 -68982907 - MER102a DNA MER1_type -2 328 73 1857 156 0 34 chr10 76607336 76607657 -68981631 + AluJo SINE Alu 1 310 -2 255 316 13 0 chr10 76608003 76608082 -68981206 + MIR3 SINE MIR 81 160 -48 270 0 0 0 chr10 76608972 76609002 -68980286 + (CA)n Simple_repeat Simple_repeat 2 31 0 469 174 47 121 chr10 76609279 76609428 -68979860 - MIR3 SINE MIR -13 195 58 617 330 35 5 chr10 76609954 76610157 -68979131 - MIR SINE MIR -34 228 20 987 140 0 0 chr10 76610710 76610853 -68978435 + AluJo SINE Alu 1 143 -169 733 278 79 8 chr10 76611184 76611450 -68977838 - L2 LINE L2 -203 3110 2826 1899 91 33 65 chr10 76612842 76613149 -68976139 - AluY SINE Alu -10 301 5 643 292 91 5 chr10 76613265 76613484 -68975804 - MLT1K LTR MaLR -330 258 21 356 245 242 18 chr10 76614331 76614519 -68974769 - MIR SINE MIR -25 237 20 915 301 25 0 chr10 76615618 76615857 -68973431 - MIR SINE MIR -16 246 2 201 175 0 0 chr10 76616208 76616248 -68973040 + (CA)n Simple_repeat Simple_repeat 2 41 0 239 139 23 0 chr10 76616268 76616311 -68972977 - MIR SINE MIR -106 156 113 208 226 153 65 chr10 76616278 76616402 -68972886 - MIR3 SINE MIR -62 146 12 * 550 136 0 0 chr10 76617341 76617422 -68971866 - AluJo/F(R)AM SINE Alu -98 214 134 1513 140 117 15 chr10 76617422 76617686 -68971602 - AluJo SINE Alu -21 291 1 259 256 37 0 chr10 76617810 76617892 -68971396 - LTR16A1 LTR ERVL 0 457 373 284 253 33 11 chr10 76618001 76618092 -68971196 - LTR16C LTR ERVL -242 249 157 276 260 28 133 chr10 76618299 76618377 -68970911 - MIR SINE MIR -42 220 170 2455 58 0 10 chr10 76618377 76618688 -68970600 - AluY SINE Alu -3 308 1 276 260 28 133 chr10 76618688 76618790 -68970498 - MIR SINE MIR -92 170 59 308 270 54 36 chr10 76618801 76618912 -68970376 - L2 LINE L2 -5 3267 3155 194 244 0 0 chr10 76620966 76621011 -68968277 - MIR SINE MIR -5 257 213 952 195 0 6 chr10 76621035 76621204 -68968084 + FRAM SINE Alu 1 166 -10 540 203 61 66 chr10 76621291 76621488 -68967800 - MER21B LTR ERV1 -19 844 649 2782 210 74 17 chr10 76621521 76622168 -68967120 - MER21B LTR ERV1 -179 684 1 267 331 12 100 chr10 76622382 76622711 -68966577 - L2 LINE L2 -32 3240 2941 356 280 43 48 chr10 76623430 76623612 -68965676 + MIR3 SINE MIR 1 172 -61 584 360 114 14 chr10 76625261 76625622 -68963666 - L2 LINE L2 -26 3246 2850 216 284 123 0 chr10 76625646 76625727 -68963561 - MIR SINE MIR -74 188 98 316 279 9 54 chr10 76625864 76625975 -68963313 - MIR SINE MIR -111 151 46 246 306 89 33 chr10 76626544 76626724 -68962564 + Charlie8 DNA MER1_type 4 193 -2224 333 323 118 16 chr10 76627681 76627867 -68961421 + MIR SINE MIR 4 208 -54 328 246 77 9 chr10 76628594 76628707 -68960581 + MIR SINE MIR 35 153 -65 221 404 46 0 chr10 76629576 76629685 -68959603 + L2 LINE L2 3126 3239 -33 575 280 169 13 chr10 76629874 76630099 -68959189 + MIR SINE MIR 2 261 -1 313 306 36 9 chr10 76630735 76630846 -68958442 + MER91A DNA MER1_type 1 114 -82 476 277 70 18 chr10 76631088 76631280 -68958008 + MIR SINE MIR 12 214 -48 1864 219 73 6 chr10 76631306 76631822 -68957466 - MLT1H LTR MaLR -2 540 7 460 253 8 132 chr10 76632436 76632799 -68956489 - MLT1J LTR MaLR -193 318 1 207 86 0 29 chr10 76632836 76632871 -68956417 + (CCCCCA)n Simple_repeat Simple_repeat 6 39 0 357 82 0 0 chr10 76633603 76633652 -68955636 + (TTCA)n Simple_repeat Simple_repeat 1 49 0 312 315 79 36 chr10 76633781 76633946 -68955342 - L2 LINE L2 -211 3061 2890 334 342 182 9 chr10 76634568 76634799 -68954489 - L2 LINE L2 0 3272 3002 249 313 111 59 chr10 76636090 76636278 -68953010 + MIR SINE MIR 36 228 -34 412 233 53 8 chr10 76636284 76636417 -68952871 - MER117 DNA MER1_type 0 197 59 813 222 6 22 chr10 76637846 76638026 -68951262 - FRAM SINE Alu -1 175 1 344 250 22 0 chr10 76638863 76638955 -68950333 - MER94 DNA DNA -39 95 2 191 250 0 21 chr10 76640835 76640883 -68948405 + L3 LINE CR1 1520 1566 -11 314 279 49 16 chr10 76642416 76642538 -68946750 - MIR SINE MIR -24 238 113 685 236 0 14 chr10 76643166 76643310 -68945978 + MIR SINE MIR 51 192 -70 564 324 47 6 chr10 76643342 76643512 -68945776 + MIR3 SINE MIR 18 194 -14 186 192 154 0 chr10 76643643 76643695 -68945593 - L2 LINE L2 -2 3311 3252 671 168 46 0 chr10 76644416 76644547 -68944741 + L1MB4 LINE L1 6044 6180 0 577 285 73 15 chr10 76644909 76645169 -68944119 - L1MC/D LINE L1 -2001 5807 5533 720 128 0 0 chr10 76646605 76646707 -68942581 + AluJ/FLAM SINE Alu 1 102 -210 1626 118 67 67 chr10 76647624 76647749 -68941539 + AluSx SINE Alu 1 125 -187 2081 108 7 7 chr10 76647749 76648044 -68941244 + AluSx SINE Alu 1 295 -17 1626 118 67 67 chr10 76648044 76648215 -68941073 + AluSx SINE Alu 124 297 -15 824 144 8 0 chr10 76648217 76648342 -68940946 - FLAM_C SINE Alu -17 126 1 417 284 51 28 chr10 76648348 76648516 -68940772 - MIR SINE MIR -77 185 12 758 103 0 0 chr10 76648934 76649031 -68940257 - AluS SINE Alu -211 102 6 998 182 0 28 chr10 76649038 76649219 -68940069 + AluJo SINE Alu 121 296 -16 2011 114 10 17 chr10 76649226 76649516 -68939772 + AluSx SINE Alu 1 288 -24 543 101 0 0 chr10 76649519 76649598 -68939690 + (CA)n Simple_repeat Simple_repeat 2 80 0 328 267 19 28 chr10 76649602 76649709 -68939579 - L1MCa LINE L1 -1339 6983 1996 * 334 257 0 14 chr10 76649676 76649750 -68939538 - L1MCa LINE L1 -4358 2068 1996 230 176 108 0 chr10 76649771 76649845 -68939443 - L1MC4 LINE L1 -1347 6695 6614 1053 150 0 0 chr10 76649850 76650030 -68939258 + (TA)n Simple_repeat Simple_repeat 1 180 0 250 299 58 0 chr10 76652696 76652783 -68936505 + MIR SINE MIR 101 192 -70 823 183 0 0 chr10 76652864 76653006 -68936282 - FLAM_C SINE Alu -1 142 1 206 400 40 24 chr10 76653706 76653831 -68935457 - MIR3 SINE MIR 0 208 82 550 281 120 0 chr10 76653918 76654085 -68935203 - MIR SINE MIR -31 231 45 888 252 59 68 chr10 76654109 76654446 -68934842 + MER102b DNA MER1_type 2 335 -6 212 310 108 19 chr10 76654470 76654628 -68934660 - MIR3 SINE MIR -25 183 12 286 190 23 150 chr10 76656139 76656272 -68933016 + MIR SINE MIR 26 147 -61 647 258 89 5 chr10 76656317 76656507 -68932781 - MIR SINE MIR -19 243 38 264 253 0 27 chr10 76656672 76656747 -68932541 - L2 LINE L2 0 3313 3241 192 161 0 0 chr10 76657810 76657841 -68931447 - MIR SINE MIR -27 235 205 2190 85 0 0 chr10 76657857 76658169 -68931119 - AluSx SINE Alu 0 312 1 1627 164 17 37 chr10 76658179 76658478 -68930810 - AluJo SINE Alu -19 293 1 927 212 25 20 chr10 76658481 76658684 -68930604 - MIR SINE MIR -46 216 13 1491 174 51 68 chr10 76658815 76659269 -68930019 - MER113 DNA MER1_type? -73 448 3 208 363 151 27 chr10 76659270 76659416 -68929872 - MIR3 SINE MIR -2 206 43 219 303 225 11 chr10 76659417 76659595 -68929693 + L3b LINE CR1 1162 1377 -206 510 341 67 14 chr10 76659892 76660115 -68929173 - MIR SINE MIR 0 262 28 260 292 14 0 chr10 76662311 76662383 -68926905 - MIR SINE MIR -73 135 63 196 315 189 9 chr10 76663534 76663645 -68925643 + L2 LINE L2 3183 3313 0 342 0 0 0 chr10 76663750 76663788 -68925500 + (CA)n Simple_repeat Simple_repeat 1 38 0 354 221 95 0 chr10 76665754 76665849 -68923439 - MIR3 SINE MIR -24 184 81 523 262 133 33 chr10 76666200 76666614 -68922674 - LTR33 LTR ERVL 0 523 59 335 219 85 0 chr10 76667055 76667137 -68922151 + MER117 DNA MER1_type 60 148 -49 226 296 123 28 chr10 76668126 76668236 -68921052 + MIR SINE MIR 45 163 -63 609 223 81 6 chr10 76668252 76668428 -68920860 + MIR SINE MIR 35 222 -40 1510 148 98 32 chr10 76668459 76668736 -68920552 - AluJo SINE Alu -17 295 1 268 316 53 0 chr10 76668839 76668915 -68920373 - MIR SINE MIR -70 192 113 239 150 0 27 chr10 76669253 76669320 -68919968 + MIR SINE MIR 104 147 -61 282 333 41 0 chr10 76669746 76669869 -68919419 - Charlie8 DNA MER1_type -2199 218 91 2201 236 130 13 chr10 76669872 76670855 -68918433 - L2 LINE L2 -6 3307 2195 192 352 34 0 chr10 76671480 76671568 -68917720 - MIR3 SINE MIR -14 194 104 322 287 113 13 chr10 76672071 76672221 -68917067 - MIR SINE MIR -82 180 16 318 376 52 6 chr10 76673094 76673267 -68916021 + MIR3 SINE MIR 28 208 0 273 236 9 45 chr10 76674362 76674472 -68914816 + CT-rich Low_complexity Low_complexity 1 106 0 677 287 66 20 chr10 76675517 76675761 -68913527 + MIR SINE MIR 8 262 0 365 250 21 71 chr10 76676006 76676146 -68913142 + MIR3 SINE MIR 38 170 -38 2151 113 0 19 chr10 76676185 76676496 -68912792 - AluSx SINE Alu -7 305 1 265 399 8 23 chr10 76676576 76676709 -68912579 + MIR3 SINE MIR 13 143 -65 309 294 127 6 chr10 76676862 76677013 -68912275 - MIR3 SINE MIR -52 156 21 560 144 0 10 chr10 76677025 76677122 -68912166 - L1PB4 LINE L1 0 6156 6061 4393 136 10 14 chr10 76677184 76677751 -68911537 - L1PB4 LINE L1 -97 6059 5491 2102 118 0 7 chr10 76677751 76678047 -68911241 - AluSx SINE Alu -17 295 2 4393 136 10 14 chr10 76678047 76678148 -68911140 - L1PB4 LINE L1 -665 5491 5392 2322 92 0 0 chr10 76678148 76678453 -68910835 - AluY SINE Alu -6 305 1 4393 136 10 14 chr10 76678453 76678513 -68910775 - L1PB4 LINE L1 -764 5392 5333 2506 74 0 0 chr10 76681262 76681574 -68907714 - AluSq SINE Alu -1 312 1 520 312 77 68 chr10 76681679 76682236 -68907052 + L1MC/D LINE L1 4669 5230 -916 2364 84 0 0 chr10 76682243 76682553 -68906735 + AluSx SINE Alu 3 312 0 216 0 0 0 chr10 76682554 76682578 -68906710 + (TA)n Simple_repeat Simple_repeat 2 25 0 465 342 138 0 chr10 76682613 76682844 -68906444 + L1MC/D LINE L1 5311 5573 -2235 203 277 9 54 chr10 76683358 76683470 -68905818 + CT-rich Low_complexity Low_complexity 2 108 0 308 263 57 78 chr10 76683560 76683687 -68905601 - L1M2 LINE L1 -613 5541 5440 2182 108 3 13 chr10 76683687 76684003 -68905285 - AluSq SINE Alu 0 313 1 308 263 57 78 chr10 76684003 76684088 -68905200 - L1M2 LINE L1 -714 5440 5355 270 319 64 38 chr10 76684318 76684475 -68904813 + L1ME LINE L1 5422 5582 -539 243 287 9 26 chr10 76685361 76685476 -68903812 + CT-rich Low_complexity Low_complexity 4 116 0 252 59 0 0 chr10 76685738 76685772 -68903516 + (GGA)n Simple_repeat Simple_repeat 2 35 0 524 135 21 10 chr10 76686285 76686381 -68902907 - L1MB2 LINE L1 0 6171 6075 188 263 53 0 chr10 76686392 76686449 -68902839 - L2 LINE L2 -3 3269 3210 * 449 197 10 150 chr10 76686417 76686610 -68902678 - MIR SINE MIR -24 238 73 239 352 33 0 chr10 76687762 76687853 -68901435 - MIR3 SINE MIR -34 174 81 193 314 0 0 chr10 76689691 76689742 -68899546 - L2 LINE L2 -17 3255 3205 572 224 8 8 chr10 76690184 76690309 -68898979 + L2 LINE L2 3188 3312 -1 2418 77 6 0 chr10 76690844 76691155 -68898133 - AluSp SINE Alu 0 313 1 2207 92 0 3 chr10 76691726 76692021 -68897267 + AluSq SINE Alu 1 294 -19 214 276 17 0 chr10 76692401 76692459 -68896829 - MIR SINE MIR -121 141 83 22 35 0 0 chr10 76693243 76693272 -68896016 + AT_rich Low_complexity Low_complexity 1 29 0 205 203 34 17 chr10 76693274 76693333 -68895955 - MIR SINE MIR -67 141 82 2011 108 6 48 chr10 76693389 76693704 -68895584 + AluSx SINE Alu 1 302 -10 276 317 17 67 chr10 76693711 76693831 -68895457 + MIR SINE MIR 54 167 -95 253 309 164 0 chr10 76694917 76695027 -68894261 - MIR3 SINE MIR -78 130 3 185 209 109 91 chr10 76696112 76696222 -68893066 - L2 LINE L2 -5 3308 3197 1897 112 72 0 chr10 76696281 76696559 -68892729 - AluSg SINE Alu -12 298 1 211 261 34 23 chr10 76697823 76697911 -68891377 + (TCCA)n Simple_repeat Simple_repeat 3 91 0 391 239 6 6 chr10 76697961 76698124 -68891164 + (TCCA)n Simple_repeat Simple_repeat 3 165 0 187 339 40 40 chr10 76698487 76698661 -68890627 + L2 LINE L2 2866 3039 -233 326 265 84 0 chr10 76698696 76698779 -68890509 - MIR SINE MIR -107 155 66 2006 137 3 13 chr10 76698864 76699177 -68890111 - AluSx SINE Alu 0 312 3 361 259 0 37 chr10 76699889 76699997 -68889291 + MIR SINE MIR 57 160 -102 205 152 0 0 chr10 76700294 76700327 -68888961 + (CCTG)n Simple_repeat Simple_repeat 3 35 0 2168 105 3 7 chr10 76700500 76700805 -68888483 + AluSx SINE Alu 1 304 -8 1996 125 10 3 chr10 76703325 76703628 -68885660 + AluSx SINE Alu 1 305 -7 968 183 6 17 chr10 76703947 76704127 -68885161 + AluJo SINE Alu 117 294 -18 668 117 0 3 chr10 76704130 76704324 -68884964 + AluSx SINE Alu 4 247 -65 222 37 0 0 chr10 76704336 76704363 -68884925 + (CA)n Simple_repeat Simple_repeat 2 28 0 207 0 0 0 chr10 76704414 76704437 -68884851 + (CA)n Simple_repeat Simple_repeat 2 24 0 26 30 0 0 chr10 76708076 76708109 -68881179 + AT_rich Low_complexity Low_complexity 1 33 0 255 275 44 11 chr10 76708153 76708244 -68881044 + MIR3 SINE MIR 82 175 -33 686 278 28 0 chr10 76710535 76710715 -68878573 + MER3 DNA MER1_type 1 185 -24 284 269 130 28 chr10 76710989 76711097 -68878191 + L2 LINE L2 3190 3308 -5 234 0 0 0 chr10 76712651 76712677 -68876611 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 365 312 107 34 chr10 76714098 76714361 -68874927 + L1ME4a LINE L1 5565 5846 -275 381 198 210 51 chr10 76714698 76714855 -68874433 - MER58A DNA MER1_type -28 196 15 1115 123 12 0 chr10 76716294 76716457 -68872831 + FRAM SINE Alu 1 162 -14 2552 42 0 10 chr10 76716815 76717128 -68872160 + AluY SINE Alu 1 310 -1 2173 110 0 0 chr10 76717145 76717445 -68871843 + AluSx SINE Alu 1 300 -12 1842 156 38 0 chr10 76718074 76718363 -68870925 + AluJb SINE Alu 1 300 -12 2624 91 22 14 chr10 76719004 76719365 -68869923 + THE1B LTR MaLR 1 364 0 1950 114 7 0 chr10 76719417 76719724 -68869564 + AluSx SINE Alu 1 309 0 249 200 0 0 chr10 76719797 76719847 -68869441 + L2 LINE L2 2200 2249 -1065 1073 256 42 16 chr10 76721966 76722275 -68867013 + MLT1I LTR MaLR 93 409 0 421 176 0 0 chr10 76723005 76723073 -68866215 - AluSg/x SINE Alu -159 153 86 1173 209 0 0 chr10 76723073 76723293 -68865995 - AluJo SINE Alu -92 220 1 189 196 0 59 chr10 76723299 76723350 -68865938 - MIR SINE MIR -54 208 161 369 346 0 0 chr10 76724106 76724545 -68864743 + (TGG)n Simple_repeat Simple_repeat 1 439 0 366 284 79 95 chr10 76724549 76725080 -68864208 - L1MDa LINE L1 -1572 5072 1331 310 151 0 0 chr10 76725940 76725993 -68863295 + L1MA6 LINE L1 6248 6300 0 2548 64 0 0 chr10 76726820 76727117 -68862171 - AluY SINE Alu -14 297 1 275 330 119 11 chr10 76727281 76727457 -68861831 - L2 LINE L2 -91 3181 2987 180 0 0 0 chr10 76729861 76729881 -68859407 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1384 162 0 0 chr10 76729887 76730091 -68859197 - AluJb SINE Alu -23 289 86 252 337 28 22 chr10 76730130 76730311 -68858977 - L1ME LINE L1 -630 5534 5353 388 222 8 51 chr10 76730693 76730810 -68858478 + MIR SINE MIR 36 147 -115 4665 231 52 37 chr10 76731176 76732594 -68856694 - L1MDa LINE L1 -5094 1448 9 314 352 73 48 chr10 76732834 76733232 -68856056 - L1ME LINE L1 -1826 4320 3913 491 204 26 18 chr10 76733958 76734071 -68855217 + MLT1E LTR MaLR 465 578 -15 597 259 27 36 chr10 76734253 76734473 -68854815 - MIR SINE MIR -24 238 21 638 216 141 35 chr10 76735206 76735433 -68853855 - L1ME3 LINE L1 0 6162 5912 235 245 215 68 chr10 76735518 76735681 -68853607 - MIR SINE MIR -10 252 66 480 278 19 49 chr10 76736621 76736826 -68852462 - MIR SINE MIR -57 205 7 371 236 65 24 chr10 76738372 76738495 -68850793 + MIR SINE MIR 77 204 -58 361 263 50 10 chr10 76738657 76738756 -68850532 - MIR SINE MIR 0 262 160 561 226 39 45 chr10 76738758 76738913 -68850375 + MLT1H1 LTR MaLR 3 156 -399 4059 199 57 17 chr10 76738915 76739797 -68849491 - MER49 LTR ERV1 0 923 7 510 255 120 43 chr10 76739921 76740129 -68849159 + MLT1H1 LTR MaLR 332 555 0 301 280 55 16 chr10 76740132 76740259 -68849029 - MIR SINE MIR -75 133 31 1609 253 205 21 chr10 76742469 76743381 -68845907 + L2 LINE L2 2154 3241 -31 316 333 9 9 chr10 76744043 76744157 -68845131 + MIR SINE MIR 23 136 -126 327 342 106 5 chr10 76744170 76744369 -68844919 - L1ME3A LINE L1 -20 6150 5932 744 227 115 10 chr10 76744554 76744831 -68844457 + L1MCc LINE L1 1357 1872 -4924 981 70 7 63 chr10 76745106 76745249 -68844039 - AluSq/x SINE Alu -174 139 5 1850 168 14 14 chr10 76745347 76745644 -68843644 - AluJo SINE Alu -15 297 1 2953 40 0 3 chr10 76746115 76746488 -68842800 - L1PA5 LINE L1 0 6154 5783 189 147 0 0 chr10 76746497 76746531 -68842757 - L2 LINE L2 -19 3294 3261 1191 193 14 5 chr10 76747210 76747423 -68841865 - MER58A DNA MER1_type 0 224 10 757 257 92 5 chr10 76748231 76748445 -68840843 - MIR SINE MIR -23 239 14 1461 231 32 34 chr10 76748875 76749553 -68839735 + L1ME LINE L1 4928 5606 -560 626 184 52 7 chr10 76749638 76749774 -68839514 - MER69 DNA AcHobo -3 2523 2382 702 237 18 65 chr10 76750318 76750590 -68838698 + MIR SINE MIR 2 255 -7 638 316 168 7 chr10 76752042 76752495 -68836793 - L2 LINE L2 -338 2976 2451 421 330 116 5 chr10 76753846 76754070 -68835218 - MER112 DNA MER1_type -11 249 1 227 143 0 0 chr10 76754766 76754801 -68834487 - L2 LINE L2 -17 3296 3262 1190 198 75 39 chr10 76755240 76755599 -68833689 - MLT1C LTR MaLR -1 466 95 2845 7 0 0 chr10 76756522 76756821 -68832467 - AluYa5 SINE Alu -12 299 1 29 70 0 0 chr10 76757077 76757134 -68832154 + AT_rich Low_complexity Low_complexity 1 57 0 280 340 39 32 chr10 76757177 76757333 -68831955 - MIR SINE MIR -90 172 16 280 323 0 0 chr10 76757982 76758047 -68831241 + Charlie8 DNA MER1_type 14 78 -2339 2411 76 3 0 chr10 76758135 76758426 -68830862 + AluSx SINE Alu 1 292 -20 191 200 22 22 chr10 76759135 76759180 -68830108 - L2 LINE L2 -556 2758 2714 2213 109 13 16 chr10 76759377 76759680 -68829608 - AluSx SINE Alu -10 302 1 574 208 39 73 chr10 76760140 76760318 -68828970 + MIR SINE MIR 32 203 -59 301 295 48 33 chr10 76760366 76760576 -68828712 - L2 LINE L2 -17 3255 3043 225 298 106 0 chr10 76761547 76761641 -68827647 - L2 LINE L2 -2 3270 3167 549 236 7 49 chr10 76762058 76762202 -68827086 + MIR SINE MIR 50 187 -75 466 168 18 71 chr10 76762998 76763111 -68826177 - MIR SINE MIR -61 201 95 250 294 55 9 chr10 76763709 76763818 -68825470 + MIR SINE MIR 23 136 -72 581 232 15 81 chr10 76763915 76764113 -68825175 - MIR SINE MIR -22 240 56 2132 119 34 7 chr10 76764319 76764613 -68824675 - AluSx SINE Alu -10 302 1 586 227 37 156 chr10 76764622 76765053 -68824235 - L1MC4 LINE L1 -142 7900 7521 350 252 19 49 chr10 76765435 76765681 -68823607 + G-rich Low_complexity Low_complexity 1 238 0 376 212 11 13 chr10 76765990 76766080 -68823208 + MER2 DNA MER2_type 1 89 -150 2227 82 62 3 chr10 76766142 76766433 -68822855 + AluSg SINE Alu 1 308 -2 1870 147 25 3 chr10 76766570 76766855 -68822433 + AluJb SINE Alu 1 291 -21 332 276 18 74 chr10 76767512 76767675 -68821613 + MIR SINE MIR 58 211 -51 2080 80 87 21 chr10 76768343 76768662 -68820626 + AluY SINE Alu 1 311 0 1629 132 47 0 chr10 76768698 76768933 -68820355 + AluJb SINE Alu 10 255 -57 208 257 100 0 chr10 76771883 76771953 -68817335 + L3 LINE CR1 1299 1375 -202 888 160 18 30 chr10 76771992 76772161 -68817127 + AluJb SINE Alu 133 299 -13 240 315 46 23 chr10 76772175 76772305 -68816983 + L3 LINE CR1 1426 1558 -19 2373 95 0 3 chr10 76772630 76772926 -68816362 - AluSg SINE Alu -15 295 1 1971 143 13 3 chr10 76772961 76773261 -68816027 + AluSx SINE Alu 1 303 -9 208 162 0 0 chr10 76774920 76774957 -68814331 + MIR SINE MIR 161 197 -65 871 158 0 0 chr10 76774977 76775110 -68814178 + AluJb SINE Alu 1 133 -179 2251 125 0 0 chr10 76775112 76775409 -68813879 + AluSx SINE Alu 1 297 -15 1485 158 137 44 chr10 76775471 76775946 -68813342 + Charlie1b DNA MER1_type 1 519 -4 231 295 157 27 chr10 76776362 76776640 -68812648 - L2 LINE L2 -7 3265 2927 234 93 259 0 chr10 76777042 76777096 -68812192 + L1MC/D LINE L1 5743 5810 -1998 1431 197 0 3 chr10 76777103 76777387 -68811901 + L1MD3 LINE L1 7705 7987 -8 600 288 136 8 chr10 76777449 76777772 -68811516 + L1ME3A LINE L1 5416 5791 -371 2202 123 0 0 chr10 76777772 76778065 -68811223 + AluSx SINE Alu 1 293 -19 600 288 136 8 chr10 76778065 76778102 -68811186 + L1ME3A LINE L1 5791 5822 -340 343 61 20 0 chr10 76778124 76778173 -68811115 - U7 snRNA snRNA -1 62 13 1456 179 41 47 chr10 76778246 76778586 -68810702 + MER44D DNA MER2_type 1 608 -1 433 214 84 38 chr10 76779493 76779624 -68809664 - MIR SINE MIR -48 214 78 2285 115 0 22 chr10 76779831 76780145 -68809143 + AluSx SINE Alu 1 307 -5 1151 53 8 0 chr10 76780561 76780693 -68808595 + AluSx SINE Alu 1 133 -180 985 127 7 7 chr10 76780794 76780944 -68808344 + AluSx SINE Alu 141 290 -22 281 231 13 0 chr10 76780957 76781035 -68808253 + LTR9 LTR ERV1 444 522 -90 241 223 180 69 chr10 76781491 76781724 -68807564 + L1ME3A LINE L1 5911 6169 -1 293 281 133 22 chr10 76781748 76781883 -68807405 + MIR3 SINE MIR 20 169 -39 985 133 6 61 chr10 76782815 76783031 -68806257 + AluSp SINE Alu 117 322 0 922 130 0 0 chr10 76783063 76783194 -68806094 - FLAM_C SINE Alu 0 133 3 5570 70 9 17 chr10 76783279 76784051 -68805237 + MER4E LTR ERV1 1 766 0 208 287 0 53 chr10 76784777 76784871 -68804417 + G-rich Low_complexity Low_complexity 6 94 0 785 105 105 49 chr10 76784949 76785092 -68804196 + AluJb SINE Alu 2 152 -160 2131 124 0 19 chr10 76785215 76785522 -68803766 + AluSg SINE Alu 1 301 -9 798 96 32 70 chr10 76785550 76785706 -68803582 - MER39 LTR ERV1 -11 696 547 321 298 39 0 chr10 76785841 76785945 -68803343 - MIR SINE MIR -68 140 33 2661 30 7 0 chr10 76786310 76786611 -68802677 + AluY SINE Alu 1 303 -8 2037 125 3 11 chr10 76786810 76787138 -68802150 - AluSx SINE Alu 0 330 5 21 0 0 0 chr10 76787142 76787163 -68802125 + AT_rich Low_complexity Low_complexity 1 21 0 307 354 34 17 chr10 76787416 76787591 -68801697 + L1ME LINE L1 5591 5768 -353 2312 103 6 13 chr10 76787807 76788118 -68801170 + AluSx SINE Alu 4 312 0 1662 170 28 10 chr10 76788553 76788842 -68800446 + AluJb SINE Alu 1 294 -18 584 243 59 72 chr10 76789327 76789549 -68799739 + MLT1J LTR MaLR 1 219 -292 28 0 0 0 chr10 76789749 76789777 -68799511 + AT_rich Low_complexity Low_complexity 1 28 0 2148 105 3 0 chr10 76789777 76790063 -68799225 - AluSx SINE Alu -2 310 24 658 206 115 0 chr10 76790141 76790306 -68798982 + MLT1J LTR MaLR 235 418 -93 2092 152 0 0 chr10 76790737 76791047 -68798241 - AluSx SINE Alu -2 310 1 2285 128 0 0 chr10 76791050 76791354 -68797934 - AluSx SINE Alu -8 304 1 466 285 142 15 chr10 76791892 76792222 -68797066 - LTR16A LTR ERVL 0 450 79 467 261 92 13 chr10 76892303 76892456 -68696832 + MER5B DNA MER1_type 14 178 0 291 304 173 18 chr10 76892466 76892524 -68696764 - MIR SINE MIR -34 228 180 2010 201 44 42 chr10 76892524 76892961 -68696327 + MLT1D LTR MaLR 1 441 -64 1713 159 20 3 chr10 76892961 76893256 -68696032 + AluJb SINE Alu 1 300 -12 2010 201 44 42 chr10 76893256 76893321 -68695967 + MLT1D LTR MaLR 441 504 -1 291 304 173 18 chr10 76893321 76893430 -68695858 - MIR SINE MIR -82 180 35 216 220 17 17 chr10 76893470 76893529 -68695759 + MIR SINE MIR 34 92 -116 2021 131 0 0 chr10 76893950 76894241 -68695047 - AluSx SINE Alu -21 291 1 2184 102 88 23 chr10 76894305 76894510 -68694778 + MER51B LTR ERV1 1 240 -137 2221 109 0 0 chr10 76894510 76894813 -68694475 - AluSx SINE Alu -9 303 1 2184 102 88 23 chr10 76894813 76894961 -68694327 + MER51B LTR ERV1 240 377 0 403 289 155 36 chr10 76895079 76895273 -68694015 + MIR SINE MIR 8 224 -38 310 239 80 0 chr10 76895303 76895391 -68693897 + L2 LINE L2 3160 3254 -18 1824 186 99 6 chr10 76896161 76896567 -68692721 - L1MD2 LINE L1 0 6359 5802 703 222 66 24 chr10 76896733 76896900 -68692388 + MER5B DNA MER1_type 2 175 -3 290 308 11 0 chr10 76897440 76897531 -68691757 - MIR SINE MIR -142 120 29 2082 120 7 7 chr10 76897927 76898235 -68691053 + AluSq SINE Alu 6 313 0 602 294 0 35 chr10 76898769 76898811 -68690477 - MER117 DNA MER1_type -1 196 154 2651 136 54 0 chr10 76898811 76899217 -68690071 + MSTA LTR MaLR 1 428 0 602 294 0 35 chr10 76899217 76899371 -68689917 - MER117 DNA MER1_type -43 154 7 2127 129 3 0 chr10 76899371 76899681 -68689607 + AluSx SINE Alu 1 311 -1 1289 180 4 21 chr10 76899714 76899953 -68689335 + AluJb SINE Alu 64 298 -14 443 263 67 83 chr10 76900320 76900632 -68688656 - L1MC4a LINE L1 -1892 5916 5610 1713 211 14 19 chr10 76900640 76900854 -68688434 - MLT1A1 LTR MaLR -6 359 146 2199 104 3 0 chr10 76900854 76901153 -68688135 - AluSp SINE Alu -13 300 1 1713 211 14 19 chr10 76901153 76901298 -68687990 - MLT1A1 LTR MaLR -219 146 2 541 256 173 31 chr10 76901373 76901708 -68687580 - MLT1J1 LTR MaLR 0 450 66 13549 107 40 67 chr10 76902019 76902141 -68687147 - Tigger1 DNA MER2_type 0 2418 2294 2191 81 0 7 chr10 76902141 76902437 -68686851 + AluSq SINE Alu 1 294 -19 13549 107 40 67 chr10 76902437 76902664 -68686624 - Tigger1 DNA MER2_type -124 2294 2062 1601 172 23 16 chr10 76902664 76902972 -68686316 - AluJo SINE Alu -2 310 1 13549 107 40 67 chr10 76902972 76903146 -68686142 - Tigger1 DNA MER2_type -356 2062 1885 2276 95 0 3 chr10 76903146 76903450 -68685838 - AluSq SINE Alu -8 305 3 13549 107 40 67 chr10 76903450 76903473 -68685815 - Tigger1 DNA MER2_type -533 1885 1863 1394 119 46 9 chr10 76903473 76903692 -68685596 - MER30 DNA MER1_type 0 230 4 13549 107 40 67 chr10 76903692 76904175 -68685113 - Tigger1 DNA MER2_type -555 1863 1368 1766 120 10 57 chr10 76904175 76904308 -68684980 + AluJo SINE Alu 11 149 -163 2263 94 3 0 chr10 76904308 76904606 -68684682 + AluSx SINE Alu 1 299 -13 1766 120 10 57 chr10 76904606 76904772 -68684516 + AluJo SINE Alu 149 296 -16 13549 107 40 67 chr10 76904772 76905633 -68683655 - Tigger1 DNA MER2_type -1050 1368 605 2214 100 13 0 chr10 76905633 76905934 -68683354 + AluSq SINE Alu 1 305 -8 13549 107 40 67 chr10 76905934 76906510 -68682778 - Tigger1 DNA MER2_type -1813 605 15 269 282 12 12 chr10 76906698 76906783 -68682505 - MIR SINE MIR -94 168 84 231 88 0 0 chr10 76906877 76906911 -68682377 + (TC)n Simple_repeat Simple_repeat 2 35 0 225 108 0 0 chr10 76906928 76906965 -68682323 + (TG)n Simple_repeat Simple_repeat 1 37 0 331 178 178 0 chr10 76907219 76907292 -68681996 - L2 LINE L2 0 3272 3187 527 118 13 0 chr10 76907389 76907504 -68681784 - FLAM_C SINE Alu 0 158 43 1692 189 31 11 chr10 76907525 76907874 -68681414 - L1MB3 LINE L1 -1 6182 5827 282 318 54 0 chr10 76907916 76908045 -68681243 + L2 LINE L2 2560 2695 -619 1020 165 0 78 chr10 76908134 76908173 -68681115 + AluJb SINE Alu 84 124 -188 1975 85 78 21 chr10 76908173 76908456 -68680832 - AluSg SINE Alu -11 299 1 1020 165 0 78 chr10 76908456 76908646 -68680642 + AluJb SINE Alu 124 295 -17 252 59 0 0 chr10 76910706 76910740 -68678548 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 639 273 167 21 chr10 76910741 76911071 -68678217 - L2 LINE L2 -14 3299 2922 2136 116 10 10 chr10 76911950 76912261 -68677027 - AluSq SINE Alu -2 311 1 355 258 107 3 chr10 76912949 76913124 -68676164 - MIR SINE MIR -50 212 16 561 209 108 20 chr10 76913540 76913688 -68675600 + MIR SINE MIR 88 248 -14 421 348 7 7 chr10 76913703 76913841 -68675447 + L2 LINE L2 3172 3309 -4 2242 97 0 3 chr10 76913909 76914208 -68675080 + AluSx SINE Alu 2 299 -13 725 146 18 0 chr10 76914264 76914374 -68674914 + FLAM_A SINE Alu 1 112 -30 1938 110 29 0 chr10 76914405 76914677 -68674611 + AluSx SINE Alu 22 301 -11 790 218 86 0 chr10 76915280 76915338 -68673950 + MER20 DNA MER1_type 31 83 -136 1779 157 20 3 chr10 76915338 76915631 -68673657 + AluJo SINE Alu 1 298 -14 790 218 86 0 chr10 76915631 76915746 -68673542 + MER20 DNA MER1_type 83 219 0 318 26 0 0 chr10 76915774 76915813 -68673475 + (TG)n Simple_repeat Simple_repeat 2 40 0 756 280 58 12 chr10 76916641 76916884 -68672404 + MIR SINE MIR 9 262 0 269 252 52 61 chr10 76916995 76917110 -68672178 - MER91C DNA MER1_type 0 140 27 612 241 115 7 chr10 76917291 76917569 -68671719 + LTR16C LTR ERVL 75 491 0 203 204 0 23 chr10 76919573 76919617 -68669671 + (CATA)n Simple_repeat Simple_repeat 2 44 0 201 233 14 27 chr10 76920278 76920351 -68668937 + T-rich Low_complexity Low_complexity 6 77 0 771 120 0 0 chr10 76922858 76922966 -68666322 + FLAM_C SINE Alu 2 109 -34 25 0 0 0 chr10 76924104 76924129 -68665159 + AT_rich Low_complexity Low_complexity 1 25 0 507 287 37 24 chr10 76924308 76924472 -68664816 + MIR3 SINE MIR 15 180 -28 1516 177 53 7 chr10 76925722 76926004 -68663284 - AluJb SINE Alu -17 295 1 330 188 30 38 chr10 76926637 76926709 -68662579 + GA-rich Low_complexity Low_complexity 3 75 -59 882 159 0 0 chr10 76926709 76926841 -68662447 + FLAM_C SINE Alu 1 132 -1 330 188 30 38 chr10 76926841 76926901 -68662387 + GA-rich Low_complexity Low_complexity 75 134 0 1817 138 3 17 chr10 76927125 76927414 -68661874 + AluJb SINE Alu 7 291 -21 563 335 82 22 chr10 76927570 76927934 -68661354 - LTR16C LTR ERVL -101 390 5 907 57 32 0 chr10 76928300 76928424 -68660864 - AluY SINE Alu -18 293 166 192 204 23 0 chr10 76929077 76929121 -68660167 - MIR SINE MIR -119 143 99 1114 207 41 110 chr10 76929238 76929362 -68659926 + MLT1A1 LTR MaLR 1 132 -233 2242 94 7 0 chr10 76929362 76929661 -68659627 + AluSg SINE Alu 1 301 -9 1114 207 41 110 chr10 76929661 76929903 -68659385 + MLT1A1 LTR MaLR 132 341 -24 431 117 39 0 chr10 76929903 76929980 -68659308 + MADE1 DNA Mariner 1 80 0 1114 207 41 110 chr10 76929980 76930004 -68659284 + MLT1A1 LTR MaLR 341 365 0 185 308 220 11 chr10 76930042 76930133 -68659155 - L3 LINE CR1 -259 1318 1209 399 158 0 13 chr10 76930152 76930228 -68659060 + MIR SINE MIR 77 151 -111 1850 133 24 27 chr10 76931107 76931401 -68657887 - AluJb SINE Alu -19 293 1 997 227 88 4 chr10 76931452 76931690 -68657598 + MIR SINE MIR 4 261 -1 2941 143 60 2 chr10 76931758 76932228 -68657060 - LOR1a LTR ERV1 0 497 1 2022 106 0 7 chr10 76932244 76932558 -68656730 + AluSx SINE Alu 1 312 0 22 0 0 0 chr10 76932740 76932762 -68656526 + AT_rich Low_complexity Low_complexity 1 22 0 531 164 156 8 chr10 76932772 76932894 -68656394 + FLAM_C SINE Alu 2 141 -2 969 268 101 45 chr10 76932895 76933026 -68656262 + L1ME4a LINE L1 5490 5612 -509 2027 120 7 0 chr10 76933026 76933203 -68656085 - AluSx SINE Alu -11 301 120 279 0 0 0 chr10 76933203 76933234 -68656054 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2027 120 7 0 chr10 76933234 76933355 -68655933 - AluSx SINE Alu -192 120 1 969 268 101 45 chr10 76933355 76933708 -68655580 + L1ME4a LINE L1 5612 6001 -120 2247 51 0 55 chr10 76933708 76934020 -68655268 + AluY SINE Alu 1 295 -16 2449 51 0 26 chr10 76934154 76934467 -68654821 + AluY SINE Alu 1 305 -6 428 269 126 55 chr10 76934564 76934746 -68654542 + MIR SINE MIR 6 200 -62 180 176 0 0 chr10 76935671 76935705 -68653583 + (CA)n Simple_repeat Simple_repeat 2 35 0 751 196 21 32 chr10 76936427 76936616 -68652672 - MER5A DNA MER1_type 0 189 3 231 233 67 33 chr10 76936631 76936721 -68652567 - MER5B DNA MER1_type -74 104 12 1862 113 92 0 chr10 76937578 76937860 -68651428 + AluSg SINE Alu 1 308 -2 221 244 0 0 chr10 76937985 76938030 -68651258 + (TG)n Simple_repeat Simple_repeat 2 46 0 625 122 0 37 chr10 76938452 76938559 -68650729 - AluSg/x SINE Alu 0 310 208 1033 187 0 0 chr10 76938726 76938892 -68650396 + FRAM SINE Alu 1 166 0 1107 295 90 3 chr10 76938930 76939296 -68649992 + MLT1J LTR MaLR 110 507 -4 315 322 11 124 chr10 76939320 76939497 -68649791 - L1ME LINE L1 -354 5767 5611 2146 116 0 0 chr10 76939500 76939801 -68649487 + AluSx SINE Alu 1 301 -11 801 128 0 64 chr10 76939843 76939984 -68649304 - FLAM_C SINE Alu 0 143 12 390 116 0 0 chr10 76940367 76940436 -68648852 - L1MA7 LINE L1 0 6291 6223 452 294 10 71 chr10 76940526 76940598 -68648690 - MIR SINE MIR 0 262 187 2163 97 23 0 chr10 76940598 76940897 -68648391 + AluSx SINE Alu 1 306 -6 452 294 10 71 chr10 76940897 76941021 -68648267 - MIR SINE MIR -75 187 78 336 24 0 0 chr10 76941192 76941233 -68648055 + (TG)n Simple_repeat Simple_repeat 2 42 0 912 178 89 18 chr10 76941251 76941476 -68647812 - MER67A LTR ERV1 -196 347 107 1119 142 15 25 chr10 76941759 76941956 -68647332 - AluSg/x SINE Alu 0 312 118 308 265 117 117 chr10 76942151 76942333 -68646955 + MIR SINE MIR 14 198 -64 1719 176 0 0 chr10 76942333 76942623 -68646665 + AluJo SINE Alu 1 290 -22 308 265 117 117 chr10 76942623 76942689 -68646599 + MIR SINE MIR 197 262 0 3944 82 6 9 chr10 76943135 76943682 -68645606 + MER41A LTR ERV1 1 545 -9 1561 163 24 17 chr10 76943682 76943971 -68645317 + AluJo SINE Alu 22 312 0 461 289 58 6 chr10 76944292 76944465 -68644823 - MIR SINE MIR 0 262 81 966 209 6 0 chr10 76945127 76945304 -68643984 - MER45A DNA AcHobo 0 178 1 1701 152 7 24 chr10 76945384 76945680 -68643608 + AluSx SINE Alu 7 297 -15 329 306 131 25 chr10 76945739 76945938 -68643350 + MIR SINE MIR 38 257 -5 2287 106 0 0 chr10 76946799 76947111 -68642177 - AluSx SINE Alu 0 312 1 367 336 99 39 chr10 76947114 76947263 -68642025 + L1MC4a LINE L1 5698 5837 -1971 2258 67 0 3 chr10 76947263 76947573 -68641715 - AluY SINE Alu 0 309 1 367 336 99 39 chr10 76947573 76947755 -68641533 + L1MC4a LINE L1 5837 6050 -1758 1331 234 96 28 chr10 76948031 76948395 -68640893 - LTR40a LTR ERVL -1 518 130 * 2629 163 85 36 chr10 76948386 76948998 -68640290 + MER4A LTR ERV1 22 663 -1 523 168 131 0 chr10 76948998 76949104 -68640184 - LTR40a LTR ERVL -398 121 2 214 272 34 0 chr10 76949108 76949195 -68640093 - MIR SINE MIR -71 137 45 23 33 0 0 chr10 76949572 76949602 -68639686 + AT_rich Low_complexity Low_complexity 1 30 0 187 214 48 0 chr10 76949823 76949865 -68639423 + MIR SINE MIR 102 145 -117 333 295 54 26 chr10 76950237 76950433 -68638855 - MIR SINE MIR -55 207 8 199 340 105 39 chr10 76951145 76951215 -68638073 + L2 LINE L2 2946 3010 -262 3185 133 44 20 chr10 76951215 76951485 -68637803 - L1PB4 LINE L1 -9 6147 5885 2167 121 0 0 chr10 76951485 76951791 -68637497 + AluSx SINE Alu 1 306 -6 3185 133 44 20 chr10 76951791 76952060 -68637228 - L1PB4 LINE L1 -271 5885 5595 199 340 105 39 chr10 76952060 76952274 -68637014 + L2 LINE L2 3010 3249 -23 882 188 10 56 chr10 76952430 76952542 -68636746 + L1MC3 LINE L1 7251 7352 -433 1894 137 3 3 chr10 76952542 76952835 -68636453 + AluSx SINE Alu 5 297 -15 882 188 10 56 chr10 76952835 76952919 -68636369 + L1MC3 LINE L1 7352 7438 -347 516 215 37 0 chr10 76952919 76953026 -68636262 - MER45 DNA AcHobo -59 119 9 391 276 47 8 chr10 76953733 76953860 -68635428 + MIR3 SINE MIR 36 167 -41 559 300 53 0 chr10 76954039 76954209 -68635079 + MIR SINE MIR 14 192 -70 2248 109 3 0 chr10 76954477 76954788 -68634500 + AluSx SINE Alu 1 312 0 257 109 22 0 chr10 76954857 76954903 -68634385 + GA-rich Low_complexity Low_complexity 3 49 0 1011 144 19 0 chr10 76955673 76955833 -68633455 - FRAM SINE Alu -12 164 2 318 250 0 83 chr10 76955844 76955976 -68633312 + L1ME LINE L1 5706 5826 -295 1045 241 139 106 chr10 76956827 76957403 -68631885 - MLT1H1 LTR MaLR 0 555 1 518 267 46 46 chr10 76957472 76957667 -68631621 + Tigger8 DNA MER2_type 47 241 -425 2188 113 3 0 chr10 76957668 76957977 -68631311 + AluSx SINE Alu 1 310 -2 788 158 0 16 chr10 76958038 76958165 -68631123 + FLAM_C SINE Alu 2 126 -17 495 267 37 0 chr10 76958376 76958511 -68630777 + L1MC5 LINE L1 7726 7865 -96 2085 102 3 3 chr10 76958516 76958830 -68630458 - AluSx SINE Alu 0 314 1 465 280 31 42 chr10 76959263 76959456 -68629832 + Charlie8 DNA MER1_type 2 192 -2225 481 224 42 98 chr10 76959511 76959696 -68629592 + MLT1C LTR MaLR 1 183 -207 1941 163 0 3 chr10 76959696 76960009 -68629279 + AluJo SINE Alu 1 312 0 481 224 42 98 chr10 76960009 76960051 -68629237 + MLT1C LTR MaLR 183 226 -164 1129 244 25 4 chr10 76960082 76960356 -68628932 + MLT1C LTR MaLR 186 465 -2 287 217 236 0 chr10 76960378 76960484 -68628804 - L3 LINE CR1 -76 1501 1371 261 281 62 38 chr10 76960596 76960756 -68628532 - L2 LINE L2 -189 3083 2920 337 228 0 43 chr10 76961049 76961141 -68628147 + MLT1K LTR MaLR 124 211 -377 321 212 24 47 chr10 76961412 76961497 -68627791 + MLT1K LTR MaLR 506 588 0 1344 128 0 15 chr10 76962102 76962340 -68626948 - AluSg/x SINE Alu 0 318 84 1971 120 31 7 chr10 76962696 76962988 -68626300 - AluSx SINE Alu -13 299 1 906 137 8 0 chr10 76962990 76963121 -68626167 - FLAM_A SINE Alu -1 132 1 329 352 98 27 chr10 76963226 76963482 -68625806 - L2 LINE L2 -453 2861 2588 209 226 7 175 chr10 76963790 76963927 -68625361 + L2 LINE L2 3139 3252 -20 425 156 21 104 chr10 76964526 76964622 -68624666 + MER21B LTR ERV1 1 88 -775 3046 182 87 2 chr10 76964624 76965196 -68624092 + MER21B LTR ERV1 41 661 -202 1440 179 4 8 chr10 76965216 76965473 -68623815 - AluJb SINE Alu -17 295 40 652 189 99 57 chr10 76965485 76965697 -68623591 + MER21B LTR ERV1 642 862 -1 2213 106 0 13 chr10 76965725 76966037 -68623251 + AluSx SINE Alu 1 308 -4 222 37 0 0 chr10 76966310 76966337 -68622951 + (GA)n Simple_repeat Simple_repeat 1 27 0 227 79 26 0 chr10 76966387 76966425 -68622863 + (TTTG)n Simple_repeat Simple_repeat 4 42 0 364 91 91 30 chr10 76966460 76966526 -68622762 - MIR3 SINE MIR -52 156 87 188 282 14 70 chr10 76966781 76966852 -68622436 + MIR SINE MIR 122 188 -74 1540 135 74 4 chr10 76966871 76967115 -68622173 + AluJo SINE Alu 13 273 -39 378 0 0 0 chr10 76967126 76967168 -68622120 + (TAA)n Simple_repeat Simple_repeat 2 43 0 1775 120 82 17 chr10 76968373 76968664 -68620624 + AluSg SINE Alu 1 310 0 2103 94 7 10 chr10 76968675 76968972 -68620316 + AluSx SINE Alu 1 296 -16 448 182 0 0 chr10 76969106 76969183 -68620105 + L1MB4 LINE L1 6045 6121 -59 1339 171 93 0 chr10 76969192 76969461 -68619827 - AluJo SINE Alu -18 294 1 243 170 0 0 chr10 76973028 76973075 -68616213 + (CA)n Simple_repeat Simple_repeat 1 47 0 228 186 0 0 chr10 76973291 76973350 -68615938 + CT-rich Low_complexity Low_complexity 1 59 0 1811 141 93 51 chr10 76975106 76975205 -68614083 + MER7A DNA MER2_type 1 94 -2944 2296 57 0 0 chr10 76975205 76975520 -68613768 - AluY SINE Alu 0 315 1 2214 92 0 29 chr10 76975520 76975826 -68613462 - AluSq SINE Alu -16 297 1 1811 141 93 51 chr10 76975826 76976058 -68613230 + MER7A DNA MER2_type 93 346 0 211 250 62 12 chr10 76976065 76976145 -68613143 + MIR SINE MIR 63 146 -62 322 356 45 0 chr10 76976313 76976487 -68612801 - MIR SINE MIR -52 210 30 356 234 72 0 chr10 76976706 76976817 -68612471 + MER69 DNA AcHobo 2 120 -2406 1371 201 11 11 chr10 76976821 76977104 -68612184 - AluJo SINE Alu -3 309 27 408 141 0 0 chr10 76977114 76977178 -68612110 + MER69 DNA AcHobo 2459 2522 -4 340 346 101 16 chr10 76977769 76977957 -68611331 - L3b LINE CR1 -55 1528 1325 216 250 0 0 chr10 76979070 76979122 -68610166 + C-rich Low_complexity Low_complexity 5 56 0 2036 135 42 0 chr10 76979959 76980248 -68609040 - AluJo SINE Alu -11 301 1 753 272 77 32 chr10 76981247 76981559 -68607729 + MER102a DNA MER1_type 3 328 -2 2320 108 3 10 chr10 76981665 76981979 -68607309 - AluSx SINE Alu 0 312 1 422 306 25 0 chr10 76982061 76982182 -68607106 - MIR3 SINE MIR -3 205 82 1496 198 128 6 chr10 76982206 76982559 -68606729 + MLT1F1 LTR MaLR 172 567 0 210 277 209 34 chr10 76984033 76984181 -68605107 - MIR3 SINE MIR -29 179 6 243 267 0 48 chr10 76985255 76985360 -68603928 + CT-rich Low_complexity Low_complexity 4 103 0 852 161 0 0 chr10 76987085 76987209 -68602079 - FLAM_C SINE Alu -19 124 1 196 351 22 30 chr10 76987260 76987394 -68601894 - MIR SINE MIR -74 188 56 194 308 96 48 chr10 76987472 76987576 -68601712 + MIR SINE MIR 17 125 -83 189 237 0 0 chr10 76987570 76987608 -68601680 + MER5B DNA MER1_type 9 46 -132 * 1922 156 0 29 chr10 76987609 76987916 -68601372 - AluJo SINE Alu -10 302 5 328 295 36 0 chr10 76988552 76988691 -68600597 + L1ME4a LINE L1 5978 6121 0 204 206 0 15 chr10 76988693 76988724 -68600564 + (TAA)n Simple_repeat Simple_repeat 3 33 -36 2442 72 13 0 chr10 76988724 76989029 -68600259 + AluY SINE Alu 1 309 -2 204 206 0 15 chr10 76989029 76989065 -68600223 + (TAA)n Simple_repeat Simple_repeat 33 69 0 925 287 24 8 chr10 76989469 76989723 -68599565 - MIR SINE MIR 0 262 5 225 286 133 0 chr10 76990326 76990424 -68598864 + MIR SINE MIR 36 146 -62 183 139 56 0 chr10 76991661 76991697 -68597591 + MIR SINE MIR 111 148 -60 262 260 27 120 chr10 76992425 76992575 -68596713 - L2 LINE L2 -14 3258 3123 1309 219 59 56 chr10 76992900 76993067 -68596221 + MLT1A2 LTR MaLR 2 167 -207 2227 128 0 0 chr10 76993067 76993371 -68595917 + AluJb SINE Alu 6 309 -3 1309 219 59 56 chr10 76993371 76993560 -68595728 + MLT1A2 LTR MaLR 167 359 -15 374 314 83 8 chr10 76993807 76993928 -68595360 - MIR3 SINE MIR -3 205 76 250 337 0 0 chr10 76994807 76994890 -68594398 - MIR SINE MIR -80 128 46 586 211 41 48 chr10 76995160 76995307 -68593981 + MIR SINE MIR 37 182 -80 268 279 0 15 chr10 76995384 76995452 -68593836 - L2 LINE L2 -8 3264 3198 314 151 247 0 chr10 76996399 76996472 -68592816 - MER91C DNA MER1_type -19 121 31 25 0 0 0 chr10 76997828 76997853 -68591435 + GC_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr10 76999109 76999130 -68590158 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr10 77000070 77000095 -68589193 + AT_rich Low_complexity Low_complexity 1 25 0 228 122 0 0 chr10 77000651 77000692 -68588596 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 1677 179 23 10 chr10 77001104 77001412 -68587876 + AluJo SINE Alu 1 312 0 2355 103 0 10 chr10 77001414 77001724 -68587564 - AluSx SINE Alu -5 307 1 1984 99 26 7 chr10 77001928 77002200 -68587088 - AluSp SINE Alu -36 277 1 307 333 52 20 chr10 77002245 77002494 -68586794 + L1MC4a LINE L1 5665 5921 -1887 1151 173 101 10 chr10 77002511 77002818 -68586470 - Charlie1 DNA MER1_type -1 2760 2426 1871 166 18 52 chr10 77002834 77003220 -68586068 - MLT1B LTR MaLR -9 381 9 1688 185 26 15 chr10 77003220 77003561 -68585727 - Charlie1 DNA MER1_type -2416 345 1 310 239 186 60 chr10 77003562 77003586 -68585702 + MIR SINE MIR 75 95 -167 1735 157 29 36 chr10 77003586 77003892 -68585396 - AluJb SINE Alu -8 304 1 310 239 186 60 chr10 77003892 77004034 -68585254 + MIR SINE MIR 95 262 0 364 0 19 38 chr10 77004109 77004162 -68585126 + (TTTA)n Simple_repeat Simple_repeat 2 53 0 421 213 0 0 chr10 77004162 77004242 -68585046 - FLAM SINE Alu -22 121 42 24 32 0 0 chr10 77005127 77005158 -68584130 + AT_rich Low_complexity Low_complexity 1 31 0 759 172 13 7 chr10 77005172 77005323 -68583965 - Charlie1 DNA MER1_type -2510 251 100 2168 125 0 19 chr10 77005414 77005727 -68583561 + AluJo SINE Alu 1 307 -5 2507 64 0 26 chr10 77006071 77006382 -68582906 + AluY SINE Alu 1 303 -8 206 256 11 33 chr10 77006643 77006733 -68582555 + GA-rich Low_complexity Low_complexity 3 90 0 2258 169 52 45 chr10 77007065 77007580 -68581708 + L1MB2 LINE L1 5652 6170 -1 632 210 89 25 chr10 77008857 77009014 -68580274 - FAM SINE Alu -8 167 1 2259 115 3 0 chr10 77010029 77010341 -68578947 + AluSp SINE Alu 1 313 0 21 0 0 0 chr10 77010377 77010398 -68578890 + AT_rich Low_complexity Low_complexity 1 21 0 2166 98 10 17 chr10 77010720 77011017 -68578271 - AluSx SINE Alu -17 295 1 904 133 0 15 chr10 77011048 77011183 -68578105 - FLAM_C SINE Alu 0 133 1 399 242 0 10 chr10 77011690 77011789 -68577499 + L1ME3A LINE L1 6065 6162 -8 1769 78 0 0 chr10 77012413 77012645 -68576643 + L1PA14 LINE L1 5930 6161 0 398 239 74 80 chr10 77012962 77013125 -68576163 - L1M4 LINE L1 -852 5294 5133 2336 107 3 0 chr10 77013183 77013483 -68575805 + AluSq SINE Alu 1 301 -12 403 247 119 23 chr10 77013536 77013620 -68575668 - MIR SINE MIR -1 261 186 2689 46 0 0 chr10 77013620 77013922 -68575366 - AluY SINE Alu -9 302 1 403 247 119 23 chr10 77013922 77014013 -68575275 - MIR SINE MIR -76 186 71 233 250 24 48 chr10 77014043 77014127 -68575161 + MER34 LTR ERV1 67 148 -394 1167 184 34 117 chr10 77014169 77014587 -68574701 + MER39 LTR ERV1 325 707 0 254 324 0 15 chr10 77014599 77014667 -68574621 - MIR SINE MIR -194 68 2 1557 206 40 58 chr10 77015417 77015979 -68573309 + LTR28 LTR ERV1 311 813 -13 3308 121 76 26 chr10 77018231 77018555 -68570733 + LTR24C LTR ERV1 1 307 -328 2300 128 0 0 chr10 77018555 77018867 -68570421 - AluJb SINE Alu 0 312 1 3308 121 76 26 chr10 77018867 77019147 -68570141 + LTR24C LTR ERV1 307 635 0 2456 79 0 0 chr10 77020997 77021289 -68567999 + AluSg SINE Alu 1 292 -18 1983 144 10 7 chr10 77021696 77021988 -68567300 + AluJb SINE Alu 1 293 -19 2481 55 0 3 chr10 77022139 77022432 -68566856 - AluY SINE Alu -19 292 1 2346 135 51 0 chr10 77022692 77023085 -68566203 + L1MB3 LINE L1 5771 6183 0 2133 119 13 0 chr10 77023090 77023392 -68565896 + AluSx SINE Alu 1 306 -6 2600 56 3 0 chr10 77024834 77025137 -68564151 + AluY SINE Alu 1 304 -7 801 199 73 29 chr10 77025402 77025608 -68563680 - MER58 DNA MER1_type -2205 215 1 252 263 0 0 chr10 77025736 77025793 -68563495 - L2 LINE L2 -9 3263 3207 262 326 95 23 chr10 77026019 77026283 -68563005 - L2 LINE L2 -1239 2075 1793 312 268 14 0 chr10 77026642 77026713 -68562575 - L1MC4 LINE L1 0 8042 7971 625 250 92 31 chr10 77026923 77027297 -68561991 - L1MEd LINE L1 -4970 1149 829 803 168 8 0 chr10 77027302 77027421 -68561867 + FLAM_C SINE Alu 1 120 -23 1159 144 17 0 chr10 77027428 77027602 -68561686 - AluSg/x SINE Alu -17 293 117 269 318 34 34 chr10 77027720 77027899 -68561389 - L1MEd LINE L1 -5379 740 562 2468 88 0 0 chr10 77028576 77028883 -68560405 + AluY SINE Alu 1 307 -4 2406 106 3 0 chr10 77028988 77029299 -68559989 + AluSq SINE Alu 1 312 -1 6645 127 69 87 chr10 77029365 77030445 -68558843 + L1MCa LINE L1 18 1065 -5361 2025 107 32 7 chr10 77030445 77030754 -68558534 + AluSx SINE Alu 1 312 0 6645 127 69 87 chr10 77030754 77031349 -68557939 + L1MCa LINE L1 1065 1669 -4757 2373 193 12 89 chr10 77031343 77031630 -68557658 + L1MCa LINE L1 2246 2554 -3872 * 1957 161 0 3 chr10 77031630 77031935 -68557353 - AluJb SINE Alu -8 304 1 2373 193 12 89 chr10 77031935 77032629 -68556659 + L1MCa LINE L1 2554 3300 -3126 2118 124 0 3 chr10 77032629 77032927 -68556361 + AluSg SINE Alu 1 297 -13 2373 193 12 89 chr10 77032927 77032990 -68556298 + L1MCa LINE L1 3300 3366 -3060 1635 169 34 37 chr10 77032990 77033286 -68556002 + AluJo SINE Alu 1 295 -17 2373 193 12 89 chr10 77033286 77033546 -68555742 + L1MCa LINE L1 3366 3645 -2781 2389 70 0 7 chr10 77033546 77033846 -68555442 + AluY SINE Alu 1 298 -13 2373 193 12 89 chr10 77033846 77033890 -68555398 + L1MCa LINE L1 3640 3461 -2961 1086 167 38 0 chr10 77033890 77034100 -68555188 + L1MC1 LINE L1 6110 6327 -6 189 0 0 0 chr10 77035214 77035235 -68554053 + (T)n Simple_repeat Simple_repeat 1 21 0 358 336 84 0 chr10 77036311 77036442 -68552846 + L2 LINE L2 3116 3257 -15 401 263 53 45 chr10 77036679 77036812 -68552476 + MIR3 SINE MIR 54 187 -21 780 231 0 0 chr10 77038200 77038369 -68550919 + AluJb SINE Alu 137 305 -7 301 287 11 58 chr10 77038763 77038850 -68550438 + MIR3 SINE MIR 1 83 -125 368 281 70 9 chr10 77038906 77039020 -68550268 + MIR3 SINE MIR 57 177 -31 1620 166 15 96 chr10 77039776 77039880 -68549408 + L1MB8 LINE L1 5724 5835 -343 1866 164 13 29 chr10 77039880 77040010 -68549278 + AluJb SINE Alu 3 134 -178 2201 119 0 13 chr10 77040010 77040313 -68548975 + AluSq SINE Alu 1 299 -14 1866 164 13 29 chr10 77040313 77040493 -68548795 + AluJb SINE Alu 134 308 -4 1620 166 15 96 chr10 77040493 77040901 -68548387 + L1MB8 LINE L1 5835 6173 -5 804 200 42 0 chr10 77041171 77041361 -68547927 - MER3 DNA MER1_type 0 209 12 2272 97 0 7 chr10 77041629 77041929 -68547359 + AluSg SINE Alu 1 298 -12 342 0 0 0 chr10 77041930 77041968 -68547320 + (CA)n Simple_repeat Simple_repeat 2 39 0 184 323 0 16 chr10 77042026 77042088 -68547200 + MIR SINE MIR 87 147 -115 2285 92 30 0 chr10 77042364 77042659 -68546629 - AluSx SINE Alu -8 304 1 1029 167 71 29 chr10 77042964 77043174 -68546114 - MER20 DNA MER1_type 0 219 1 364 153 71 12 chr10 77043239 77043324 -68545964 + MER53 DNA DNA 93 182 -7 * 382 176 71 0 chr10 77043255 77043340 -68545948 - MER53 DNA DNA -98 91 1 412 334 93 61 chr10 77043734 77044197 -68545091 - L2 LINE L2 -8 3264 2778 620 224 137 0 chr10 77044326 77044487 -68544801 - MIR SINE MIR -27 235 53 1174 105 0 7 chr10 77044489 77044642 -68544646 + AluSq/x SINE Alu 1 152 -160 1853 157 10 26 chr10 77044642 77044955 -68544333 + AluJo SINE Alu 4 311 -1 894 270 192 5 chr10 77045685 77046284 -68543004 - L2 LINE L2 -50 3263 2541 1788 151 0 42 chr10 77046494 77046667 -68542621 - AluJo SINE Alu 0 312 162 6112 52 8 72 chr10 77046667 77047550 -68541738 + LTR12 LTR ERV1 1 826 0 1788 151 0 42 chr10 77047550 77047706 -68541582 - AluJo SINE Alu -150 162 1 2291 110 0 3 chr10 77047737 77048045 -68541243 + AluSg SINE Alu 1 307 -3 2129 139 0 3 chr10 77048345 77048655 -68540633 - AluSx SINE Alu -3 309 1 309 230 196 61 chr10 77048924 77049072 -68540216 - MIR3 SINE MIR -21 187 20 297 281 38 69 chr10 77049075 77049094 -68540194 + L2 LINE L2 3159 3177 -136 1684 96 153 0 chr10 77049094 77049355 -68539933 - AluSx SINE Alu 0 302 2 297 281 38 69 chr10 77049355 77049495 -68539793 + L2 LINE L2 3177 3313 0 2389 86 0 6 chr10 77049592 77049905 -68539383 - AluY SINE Alu 0 311 1 190 319 67 42 chr10 77050270 77050389 -68538899 - L2 LINE L2 0 3313 3192 196 288 17 17 chr10 77051406 77051465 -68537823 + MIR SINE MIR 23 81 -181 459 0 0 0 chr10 77051527 77051578 -68537710 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 234 184 0 0 chr10 77051578 77051627 -68537661 + (TA)n Simple_repeat Simple_repeat 1 49 0 442 336 25 25 chr10 77051793 77052108 -68537180 - L1ME4a LINE L1 -277 6238 5924 183 333 101 30 chr10 77052196 77052295 -68536993 + L2 LINE L2 3196 3301 -12 411 296 128 55 chr10 77052391 77052790 -68536498 - L1ME4a LINE L1 -1929 4611 4184 2201 113 0 0 chr10 77052856 77053157 -68536131 - AluSx SINE Alu -11 301 1 2224 109 3 3 chr10 77053370 77053673 -68535615 + AluY SINE Alu 1 303 -8 275 295 26 13 chr10 77053693 77053849 -68535439 - L1M4 LINE L1 -1707 4439 4282 665 182 18 0 chr10 77053857 77053988 -68535300 - FLAM_A SINE Alu 0 137 5 994 289 63 25 chr10 77054047 77054474 -68534814 - L1M4 LINE L1 -3348 2798 2336 1955 120 48 0 chr10 77054474 77054765 -68534523 - AluSg1 SINE Alu -4 305 1 994 289 63 25 chr10 77054765 77054990 -68534298 - L1M4 LINE L1 -3810 2336 2121 416 278 107 28 chr10 77055432 77055759 -68533529 - L1ME4a LINE L1 -4539 2001 1649 293 239 132 89 chr10 77055806 77056019 -68533269 + L2 LINE L2 2826 3047 -225 228 186 102 0 chr10 77056066 77056125 -68533163 + Charlie1 DNA MER1_type 1567 1631 -1130 610 289 13 7 chr10 77056220 77056369 -68532919 + L2 LINE L2 3123 3272 0 262 222 170 82 chr10 77056497 77056668 -68532620 + L2 LINE L2 2914 3099 -173 213 296 132 43 chr10 77056812 77057069 -68532219 - L2 LINE L2 -1700 1614 1335 210 327 69 30 chr10 77057442 77057543 -68531745 + L2 LINE L2 3163 3267 -5 2117 129 3 0 chr10 77057749 77058043 -68531245 - AluSx SINE Alu -17 295 1 21 36 0 0 chr10 77058043 77058071 -68531217 + AT_rich Low_complexity Low_complexity 1 28 0 534 291 98 5 chr10 77058127 77058330 -68530958 + MIR SINE MIR 41 262 0 5617 154 83 71 chr10 77058378 77059647 -68529641 + Charlie1a DNA MER1_type 1 1290 -1471 2554 65 0 0 chr10 77059647 77059955 -68529333 + AluY SINE Alu 1 308 -3 5617 154 83 71 chr10 77059955 77060121 -68529167 + Charlie1a DNA MER1_type 1290 1453 -2 2305 110 3 0 chr10 77060394 77060694 -68528594 + AluSq SINE Alu 1 301 -12 7339 38 7 1 chr10 77061137 77062093 -68527195 + L1PA6 LINE L1 5191 6149 -5 256 191 0 183 chr10 77062129 77062186 -68527102 - MIR SINE MIR -32 230 164 2169 89 3 10 chr10 77062186 77062479 -68526809 - AluSc SINE Alu -18 291 1 1729 125 0 113 chr10 77062483 77062820 -68526468 - AluJb SINE Alu -3 299 1 256 191 0 183 chr10 77062820 77062872 -68526416 - MIR SINE MIR -101 161 137 585 172 43 9 chr10 77063041 77063157 -68526131 + FLAM_A SINE Alu 1 120 -13 2373 78 7 3 chr10 77063907 77064216 -68525072 - AluY SINE Alu -1 310 1 2048 119 27 0 chr10 77064216 77064511 -68524777 - AluSq SINE Alu -10 303 1 281 237 21 11 chr10 77064528 77064621 -68524667 + L1MC4a LINE L1 5570 5663 -458 461 177 62 39 chr10 77064654 77064784 -68524504 + L1MC5 LINE L1 7096 7228 -733 228 282 0 12 chr10 77064862 77064947 -68524341 + L1MC4a LINE L1 7274 7357 -451 2050 158 0 0 chr10 77064984 77065282 -68524006 - AluSx SINE Alu -14 298 1 474 266 42 130 chr10 77065282 77065666 -68523622 + L1MC4a LINE L1 5682 6031 -1777 1190 195 22 7 chr10 77065784 77066056 -68523232 + L1ME2 LINE L1 5879 6154 -10 348 256 85 39 chr10 77066071 77066200 -68523088 + L1ME4a LINE L1 5984 6118 -3 308 359 0 26 chr10 77066321 77066438 -68522850 + L2 LINE L2 3200 3313 0 2311 140 46 24 chr10 77066502 77066915 -68522373 + MSTB LTR MaLR 5 426 0 2388 70 0 32 chr10 77066971 77067287 -68522001 + AluY SINE Alu 1 306 -5 716 131 0 0 chr10 77067490 77067597 -68521691 - FLAM_C SINE Alu -36 107 1 562 123 49 49 chr10 77068136 77068258 -68521030 + L1MB2 LINE L1 6048 6169 -2 2532 69 0 0 chr10 77070390 77070694 -68518594 - AluY SINE Alu -7 304 1 769 163 0 30 chr10 77071069 77071204 -68518084 + FLAM_C SINE Alu 1 131 -2 37 81 0 0 chr10 77071204 77071290 -68517998 + AT_rich Low_complexity Low_complexity 1 86 0 2438 73 0 0 chr10 77071292 77071593 -68517695 + AluY SINE Alu 1 301 -10 672 244 29 12 chr10 77071757 77071929 -68517359 + MLT1E2 LTR MaLR 1 175 -451 2906 156 76 38 chr10 77072220 77072649 -68516639 + L1MB5 LINE L1 4806 5217 -957 2303 87 3 13 chr10 77072649 77072961 -68516327 - AluY SINE Alu -2 309 1 936 164 13 13 chr10 77072964 77073123 -68516165 - FRAM SINE Alu -6 160 2 2906 156 76 38 chr10 77073123 77073151 -68516137 + L1MB5 LINE L1 5218 5243 -931 2285 114 0 0 chr10 77073151 77073448 -68515840 + AluSx SINE Alu 1 297 -15 2906 156 76 38 chr10 77073448 77073943 -68515345 + L1MB5 LINE L1 5243 5831 -343 2261 91 0 14 chr10 77073943 77074239 -68515049 + AluSx SINE Alu 1 292 -20 3744 178 39 50 chr10 77074285 77074455 -68514833 - L1MB5 LINE L1 -4 6170 6000 2005 145 3 0 chr10 77074455 77074752 -68514536 - AluSx SINE Alu -14 298 1 3744 178 39 50 chr10 77074752 77075504 -68513784 - L1MB5 LINE L1 -174 6000 5258 2309 84 3 7 chr10 77075607 77075906 -68513382 - AluSp SINE Alu -15 298 1 856 267 93 8 chr10 77076390 77076626 -68512662 - MIR SINE MIR -3 259 4 715 128 0 0 chr10 77076811 77076913 -68512375 + AluJ/FLAM SINE Alu 1 102 -210 3654 194 30 29 chr10 77077023 77078110 -68511178 + L1MB7 LINE L1 5088 6175 -9 1519 156 12 8 chr10 77078129 77078379 -68510909 - AluJo SINE Alu -12 300 50 2130 84 0 4 chr10 77078407 77078704 -68510584 + AluY SINE Alu 9 304 0 2465 200 125 52 chr10 77078704 77079059 -68510229 + L1MC4a LINE L1 5270 5598 -2210 1436 199 43 51 chr10 77079059 77079452 -68509836 + MLT1B LTR MaLR 1 390 0 2465 200 125 52 chr10 77079452 77079662 -68509626 + L1MC4a LINE L1 5598 5791 -2017 1747 137 50 14 chr10 77079662 77079939 -68509349 + AluJb SINE Alu 5 291 -21 2465 200 125 52 chr10 77079939 77080324 -68508964 + L1MC4a LINE L1 5791 6290 -1518 2315 100 0 0 chr10 77080328 77080628 -68508660 + AluSq SINE Alu 1 300 -13 783 263 138 7 chr10 77080628 77080925 -68508363 + L1MC4 LINE L1 7200 7535 -507 693 158 140 18 chr10 77080941 77081112 -68508176 + AluJo SINE Alu 119 310 -2 634 256 57 40 chr10 77081115 77081342 -68507946 + L1MC4 LINE L1 7580 7810 -232 634 181 48 0 chr10 77081349 77081454 -68507834 + FLAM_A SINE Alu 1 110 -32 454 235 160 5 chr10 77081465 77081652 -68507636 + L1MC4 LINE L1 7817 8032 -10 1520 182 266 10 chr10 77081653 77081915 -68507373 - MLT1D LTR MaLR 0 505 311 2033 106 34 0 chr10 77081915 77082207 -68507081 - AluSx SINE Alu -10 302 1 1520 182 266 10 chr10 77082207 77082346 -68506942 - MLT1D LTR MaLR -194 311 1 2165 104 0 3 chr10 77082624 77082932 -68506356 + AluSg SINE Alu 1 307 -3 845 165 0 0 chr10 77083003 77083136 -68506152 - FLAM_C SINE Alu 0 133 1 366 290 29 97 chr10 77083191 77083524 -68505764 - L1MEc LINE L1 -5073 1112 789 568 254 39 0 chr10 77085219 77085349 -68503939 + MIR3 SINE MIR 36 170 -38 484 282 162 19 chr10 77085589 77085805 -68503483 + MIR SINE MIR 3 249 -13 456 261 42 14 chr10 77086496 77086638 -68502650 - MIR SINE MIR -1 261 116 1797 154 7 13 chr10 77086830 77087135 -68502153 - AluJb SINE Alu -9 303 1 249 324 123 66 chr10 77087226 77087634 -68501654 + L2 LINE L2 2842 3272 0 285 216 171 34 chr10 77088852 77088940 -68500348 + MLT1E2 LTR MaLR 109 208 -418 1382 159 7 76 chr10 77088991 77089281 -68500007 + MLT1E2 LTR MaLR 355 624 -2 2024 139 0 3 chr10 77089648 77089958 -68499330 - AluSx SINE Alu -3 309 1 317 230 196 61 chr10 77090227 77090375 -68498913 - MIR3 SINE MIR -21 187 20 306 261 85 72 chr10 77090382 77090394 -68498894 + L2 LINE L2 3159 3169 -144 1607 106 152 15 chr10 77090394 77090658 -68498630 - AluSx SINE Alu -1 301 2 306 261 85 72 chr10 77090658 77090798 -68498490 + L2 LINE L2 3169 3313 0 2127 96 0 34 chr10 77090895 77091217 -68498071 - AluY SINE Alu 0 311 1 2259 138 49 23 chr10 77091273 77091658 -68497630 - MSTB LTR MaLR 0 426 32 741 203 0 0 chr10 77091844 77091982 -68497306 + FLAM_C SINE Alu 2 139 -4 1022 62 69 0 chr10 77092286 77092430 -68496858 + L1PA11 LINE L1 6018 6171 -3 21 36 0 0 chr10 77092733 77092761 -68496527 + AT_rich Low_complexity Low_complexity 1 28 0 908 171 5 42 chr10 77094361 77094554 -68494734 - AluJo SINE Alu -126 186 1 2337 75 16 0 chr10 77094569 77094875 -68494413 - AluSp SINE Alu -2 311 1 720 148 26 0 chr10 77096473 77096588 -68492700 - AluJb SINE Alu -5 307 190 1936 113 3 34 chr10 77096802 77097120 -68492168 - AluSx SINE Alu 0 309 1 755 182 0 0 chr10 77098586 77098707 -68490581 + FLAM_A SINE Alu 3 123 -10 1995 126 3 3 chr10 77098714 77099007 -68490281 + AluSq SINE Alu 1 293 -20 699 133 9 0 chr10 77099203 77099308 -68489980 - AluJb SINE Alu -205 107 2 231 239 108 24 chr10 77099474 77099641 -68489647 + L1ME4a LINE L1 5939 6119 -2 1814 108 9 63 chr10 77099645 77099960 -68489328 + AluSp SINE Alu 1 298 -15 418 169 85 108 chr10 77100154 77100284 -68489004 - MER3 DNA MER1_type 0 209 83 1118 170 181 19 chr10 77100469 77100739 -68488549 - MSTB1 LTR MaLR -118 314 1 647 377 0 0 chr10 77100757 77101014 -68488274 - MIR SINE MIR 0 262 6 279 253 0 38 chr10 77101010 77101089 -68488199 + L2 LINE L2 3238 3313 0 * 245 288 88 16 chr10 77102658 77102783 -68486505 + MIR SINE MIR 64 197 -65 276 230 46 46 chr10 77103221 77103308 -68485980 + MER91B DNA MER1_type 53 139 -51 1604 95 33 4 chr10 77103418 77103660 -68485628 + AluSx SINE Alu 54 302 -10 479 340 37 19 chr10 77103700 77104162 -68485126 - L2 LINE L2 -847 2467 1932 1335 126 9 14 chr10 77104162 77104384 -68484904 - AluSq SINE Alu -82 231 11 205 212 61 15 chr10 77104967 77105033 -68484255 + GA-rich Low_complexity Low_complexity 6 74 0 1941 131 7 0 chr10 77105289 77105580 -68483708 + AluSx SINE Alu 1 293 -19 24 0 0 0 chr10 77105580 77105604 -68483684 + AT_rich Low_complexity Low_complexity 1 24 0 1834 91 0 0 chr10 77106767 77107009 -68482279 - AluSg SINE Alu -56 254 13 511 165 46 18 chr10 77107067 77107082 -68482206 - MER3 DNA MER1_type 5 167 154 2380 45 0 3 chr10 77107082 77107372 -68481916 - AluY SINE Alu -22 289 1 511 165 46 18 chr10 77107372 77107465 -68481823 - MER3 DNA MER1_type -8 154 56 648 187 7 90 chr10 77107887 77108042 -68481246 + MIR SINE MIR 8 149 -113 815 148 0 42 chr10 77108163 77108305 -68480983 + AluJo SINE Alu 1 136 -176 494 307 36 36 chr10 77108760 77108952 -68480336 + MIR SINE MIR 48 239 -23 403 234 47 9 chr10 77109180 77109287 -68480001 - MIR SINE MIR -119 143 33 282 29 0 0 chr10 77110126 77110161 -68479127 + (CA)n Simple_repeat Simple_repeat 2 36 0 2043 124 0 0 chr10 77110161 77110451 -68478837 - AluSx SINE Alu -22 290 1 1661 150 0 58 chr10 77110800 77111113 -68478175 + AluJo SINE Alu 1 295 -17 232 241 80 54 chr10 77111737 77111849 -68477439 - MIR SINE MIR -55 207 93 200 296 80 76 chr10 77112094 77112344 -68476944 - L2 LINE L2 -98 3174 2924 469 248 6 89 chr10 77112624 77112939 -68476349 + AluSx SINE Alu 14 302 -10 843 117 15 0 chr10 77113445 77113582 -68475706 + FRAM SINE Alu 26 164 -12 544 349 108 12 chr10 77114069 77114404 -68474884 + L2 LINE L2 2897 3263 -9 2192 103 3 0 chr10 77114407 77114707 -68474581 + AluSx SINE Alu 1 301 -11 1056 121 0 0 chr10 77114707 77114856 -68474432 + AluY SINE Alu 1 149 -162 900 111 7 52 chr10 77115105 77115140 -68474148 - AluY SINE Alu -165 146 111 2268 70 3 3 chr10 77115140 77115440 -68473848 - AluY SINE Alu -11 300 1 900 111 7 52 chr10 77115440 77115557 -68473731 - AluY SINE Alu -200 111 1 2531 139 22 55 chr10 77116440 77116872 -68472416 + L1MD1 LINE L1 5755 6169 -73 1580 191 10 3 chr10 77116872 77117166 -68472122 - AluJo SINE Alu -14 298 3 2531 139 22 55 chr10 77117166 77117238 -68472050 + L1MD1 LINE L1 6169 6242 0 350 255 105 26 chr10 77117244 77117397 -68471891 + Charlie8 DNA MER1_type 107 271 -2146 1993 104 62 32 chr10 77117527 77117836 -68471452 - THE1B LTR MaLR -46 318 1 5321 82 27 20 chr10 77117836 77118571 -68470717 - THE1B-int LTR MaLR 0 1580 841 8170 177 8 1 chr10 77118707 77120161 -68469127 - L1P LINE L1 -975 5171 3708 194 328 16 0 chr10 77120322 77120386 -68468902 + L2 LINE L2 3238 3302 -11 187 264 132 44 chr10 77120399 77120490 -68468798 + MIR SINE MIR 44 142 -66 339 25 0 0 chr10 77120919 77120959 -68468329 + (TG)n Simple_repeat Simple_repeat 2 41 0 1860 74 0 4 chr10 77121087 77121330 -68467958 - AluSc SINE Alu -2 307 66 390 289 15 30 chr10 77122108 77122243 -68467045 - AluSq/x SINE Alu -169 134 2 682 204 52 92 chr10 77122243 77122645 -68466643 + L1MC5 LINE L1 7542 7927 -34 329 301 9 9 chr10 77123268 77123381 -68465907 - MIR3 SINE MIR -50 158 46 512 218 27 0 chr10 77124130 77124240 -68465048 - MER81 DNA DNA -1 113 1 39 92 0 0 chr10 77125105 77125214 -68464074 + GC_rich Low_complexity Low_complexity 1 109 0 623 157 19 19 chr10 77125718 77125826 -68463462 + FLAM_A SINE Alu 21 128 -14 205 219 333 10 chr10 77126023 77126119 -68463169 - MER5A DNA MER1_type 0 189 63 1763 100 16 0 chr10 77126699 77126950 -68462338 - AluSp SINE Alu -58 255 1 370 313 73 26 chr10 77127177 77127369 -68461919 + MIR SINE MIR 5 205 -57 1462 153 75 18 chr10 77128114 77128395 -68460893 - AluJo SINE Alu -13 299 3 262 263 145 0 chr10 77128431 77128507 -68460781 - MIR SINE MIR -122 140 54 1955 105 0 85 chr10 77128507 77128849 -68460439 + AluSq SINE Alu 1 313 0 919 195 115 10 chr10 77129775 77129975 -68459313 - MER58A DNA MER1_type -3 221 1 533 227 32 81 chr10 77130295 77130480 -68458808 - MER5B DNA MER1_type -2 176 1 4435 173 61 41 chr10 77130850 77131829 -68457459 - pTR5 LTR ERV1 -670 1768 770 853 174 0 0 chr10 77132307 77132439 -68456849 - FLAM_C SINE Alu 0 133 2 2210 261 45 41 chr10 77136321 77137617 -68451671 + L1M4c LINE L1 1295 2697 -3685 821 74 28 0 chr10 77137736 77137873 -68451415 + AluSg/x SINE Alu 173 312 0 1669 191 16 50 chr10 77138189 77138566 -68450722 + MLT1A1 LTR MaLR 2 365 0 1403 149 147 14 chr10 77138570 77138938 -68450350 + MLT1A1-int LTR MaLR 5 432 -946 192 77 0 0 chr10 77138938 77138964 -68450324 + (CTATT)n Simple_repeat Simple_repeat 5 30 0 180 313 43 43 chr10 77138981 77139096 -68450192 + MIR SINE MIR 23 137 -125 215 312 37 46 chr10 77141588 77141697 -68447591 + L2 LINE L2 3159 3266 -6 2201 96 14 10 chr10 77141893 77142186 -68447102 + AluSx SINE Alu 1 294 -18 2226 108 3 0 chr10 77142203 77142489 -68446799 + AluSx SINE Alu 1 287 -25 304 305 94 0 chr10 77142507 77142635 -68446653 - MER5A DNA MER1_type -49 140 1 843 219 0 0 chr10 77142638 77142789 -68446499 + FRAM SINE Alu 2 152 -24 1765 126 8 12 chr10 77142821 77143075 -68446213 + AluSc SINE Alu 1 253 -56 2210 99 0 7 chr10 77143856 77144149 -68445139 + AluSp SINE Alu 1 291 -22 191 300 75 25 chr10 77144371 77144451 -68444837 + MIR SINE MIR 31 114 -94 2132 134 0 0 chr10 77144491 77144783 -68444505 + AluSx SINE Alu 1 292 -20 2382 87 10 0 chr10 77144784 77145083 -68444205 + AluSx SINE Alu 1 302 -10 1416 153 48 12 chr10 77145130 77145378 -68443910 + AluJo SINE Alu 12 268 -44 1781 144 34 17 chr10 77146696 77146994 -68442294 - AluJo SINE Alu -9 303 1 2283 102 0 0 chr10 77147002 77147344 -68441944 - AluSq SINE Alu 0 342 1 1138 146 0 10 chr10 77147486 77147678 -68441610 - AluJb SINE Alu -3 309 120 249 123 96 27 chr10 77147678 77147751 -68441537 - AluY SINE Alu -12 289 212 2065 104 113 6 chr10 77150419 77150755 -68438533 + L1P5 LINE L1 5408 5779 -372 1470 142 0 103 chr10 77150756 77151087 -68438201 + AluJb SINE Alu 1 297 -15 1376 186 47 11 chr10 77151121 77151396 -68437892 + AluJb SINE Alu 3 287 -25 502 294 77 5 chr10 77151643 77151837 -68437451 - AluJb SINE Alu -9 303 96 275 275 114 8 chr10 77153066 77153197 -68436091 - L2 LINE L2 0 3313 3169 234 202 34 34 chr10 77153361 77153450 -68435838 - L1ME4a LINE L1 -21 6100 6012 829 243 0 0 chr10 77153450 77153631 -68435657 + LTR33 LTR ERVL 1 181 -340 1335 149 26 94 chr10 77153821 77154015 -68435273 - AluSx SINE Alu -25 287 120 243 0 0 0 chr10 77154015 77154042 -68435246 + (TTTA)n Simple_repeat Simple_repeat 4 30 0 1335 149 26 94 chr10 77154042 77154155 -68435133 - AluSx SINE Alu -192 120 1 490 229 9 0 chr10 77154359 77154464 -68434824 - MIR SINE MIR -109 153 48 191 61 30 0 chr10 77154561 77154594 -68434694 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 314 44 132 0 chr10 77155224 77155292 -68433996 + CT-rich Low_complexity Low_complexity 4 80 0 1067 110 52 64 chr10 77157056 77157164 -68432124 + AluSx SINE Alu 1 108 -204 2293 83 27 7 chr10 77157164 77157464 -68431824 + AluSg1 SINE Alu 2 307 -2 1067 110 52 64 chr10 77157464 77157528 -68431760 + AluSx SINE Alu 108 171 -141 23 0 0 0 chr10 77157979 77158002 -68431286 + AT_rich Low_complexity Low_complexity 1 23 0 2060 259 71 36 chr10 77158003 77158923 -68430365 + L1ME LINE L1 4176 5127 -1019 1110 241 59 12 chr10 77158934 77159359 -68429929 + L1ME LINE L1 5236 5680 -482 289 101 8 101 chr10 77159568 77159697 -68429591 + (TA)n Simple_repeat Simple_repeat 2 118 0 317 254 0 0 chr10 77159735 77159798 -68429490 + L2 LINE L2 3202 3264 -8 365 261 146 18 chr10 77159872 77160037 -68429251 + MER5A DNA MER1_type 1 186 -3 308 327 0 9 chr10 77160215 77160322 -68428966 + GA-rich Low_complexity Low_complexity 1 106 0 266 315 126 14 chr10 77161350 77161493 -68427795 + MIR3 SINE MIR 23 181 -27 2099 117 7 7 chr10 77161539 77161830 -68427458 + AluSx SINE Alu 1 291 -21 1687 194 45 107 chr10 77161999 77162691 -68426597 + L1 LINE L1 2666 3314 -2832 1669 196 13 53 chr10 77162691 77163069 -68426219 - MLT1B LTR MaLR 0 390 28 1037 239 24 66 chr10 77163070 77163451 -68425837 + L1 LINE L1 3292 3656 -2490 2277 81 3 3 chr10 77163943 77164251 -68425037 - AluSp SINE Alu 0 308 1 1980 132 28 0 chr10 77165582 77165869 -68423419 + AluJb SINE Alu 1 295 -17 1401 166 117 15 chr10 77166225 77166490 -68422798 + AluJb SINE Alu 1 292 -20 318 106 0 0 chr10 77166533 77166580 -68422708 - Alu SINE Alu -9 292 246 1203 154 0 11 chr10 77167176 77167364 -68421924 - AluSx SINE Alu -124 188 3 2179 142 0 6 chr10 77167404 77167715 -68421573 - AluSx SINE Alu -3 309 1 323 150 50 0 chr10 77167781 77167841 -68421447 - L1ME LINE L1 -406 5760 5698 559 270 54 0 chr10 77167939 77168124 -68421164 - MIR SINE MIR -3 259 65 888 140 37 0 chr10 77168409 77168545 -68420743 + AluJb SINE Alu 1 141 -171 201 39 0 0 chr10 77168577 77168603 -68420685 + (CAA)n Simple_repeat Simple_repeat 2 27 0 555 256 116 10 chr10 77169250 77169457 -68419831 + L1M4 LINE L1 2683 2911 -3235 526 167 0 0 chr10 77169625 77169733 -68419555 - L1MB4 LINE L1 0 6180 6073 2843 166 29 53 chr10 77169733 77170521 -68418767 - L1MB4 LINE L1 -343 5831 5053 602 199 61 61 chr10 77170521 77170702 -68418586 - MLT1C LTR MaLR 0 467 287 1550 121 179 17 chr10 77170807 77171104 -68418184 - MSTA LTR MaLR -83 345 1 602 169 126 32 chr10 77171256 77171411 -68417877 - L1ME2 LINE L1 -169 5995 5815 509 259 19 12 chr10 77171419 77171581 -68417707 - L1ME LINE L1 -5902 168 6 21 36 0 0 chr10 77171601 77171629 -68417659 + AT_rich Low_complexity Low_complexity 1 28 0 264 305 73 29 chr10 77171964 77172236 -68417052 - L1M4 LINE L1 -3732 2912 2629 22 35 0 0 chr10 77172359 77172388 -68416900 + AT_rich Low_complexity Low_complexity 1 29 0 460 152 63 0 chr10 77172446 77172525 -68416763 + MSTB LTR MaLR 343 426 0 284 269 88 16 chr10 77172779 77172961 -68416327 - HAL1b LINE L1 -703 645 451 4841 240 65 28 chr10 77173136 77174543 -68414745 - L1M4 LINE L1 -5001 1541 83 1245 101 61 2 chr10 77174726 77174926 -68414362 + LTR12 LTR ERV1 513 714 0 1691 153 16 33 chr10 77175196 77175503 -68413785 - AluJb SINE Alu -10 302 1 26 64 0 0 chr10 77176127 77176174 -68413114 + AT_rich Low_complexity Low_complexity 1 47 0 23 33 0 0 chr10 77176236 77176266 -68413022 + AT_rich Low_complexity Low_complexity 1 30 0 334 300 100 29 chr10 77176603 77176773 -68412515 - L2 LINE L2 -506 2808 2627 21 36 0 0 chr10 77179966 77179994 -68409294 + AT_rich Low_complexity Low_complexity 1 28 0 2358 272 52 30 chr10 77180434 77181258 -68408030 + L1M4 LINE L1 2931 3736 -2410 225 0 0 0 chr10 77181258 77181283 -68408005 + (TG)n Simple_repeat Simple_repeat 2 26 0 2358 272 52 30 chr10 77181283 77181353 -68407935 + L1M4 LINE L1 3736 3803 -2343 2367 85 0 0 chr10 77181353 77181659 -68407629 + AluY SINE Alu 1 306 -5 2358 272 52 30 chr10 77181659 77181925 -68407363 + L1M4 LINE L1 3803 4117 -2029 1797 79 0 0 chr10 77181925 77182153 -68407135 - AluY SINE Alu -18 293 66 759 272 92 53 chr10 77182284 77182644 -68406644 + L2 LINE L2 2940 3313 0 22 35 0 0 chr10 77183124 77183153 -68406135 + AT_rich Low_complexity Low_complexity 1 29 0 180 238 48 32 chr10 77183290 77183353 -68405935 - L3b LINE CR1 -263 1320 1257 230 198 0 74 chr10 77183926 77184007 -68405281 + GA-rich Low_complexity Low_complexity 2 76 0 286 236 142 17 chr10 77184409 77184525 -68404763 + MIR3 SINE MIR 41 170 -38 739 198 40 0 chr10 77185204 77185330 -68403958 + FLAM_C SINE Alu 2 132 -11 457 16 32 0 chr10 77185770 77185832 -68403456 + (TA)n Simple_repeat Simple_repeat 2 65 0 29 0 0 0 chr10 77185832 77185861 -68403427 + AT_rich Low_complexity Low_complexity 1 29 0 734 83 83 9 chr10 77185875 77185983 -68403305 - L1PA10 LINE L1 -1 6167 6052 755 204 7 0 chr10 77186370 77186507 -68402781 - FLAM_C SINE Alu -4 139 2 453 92 0 0 chr10 77187263 77187328 -68401960 - MER116 DNA Mariner -1 79 15 339 317 118 27 chr10 77188090 77188311 -68400977 + MIR SINE MIR 21 261 -1 2263 80 23 3 chr10 77189801 77190101 -68399187 - AluSx SINE Alu -6 306 1 23 33 0 0 chr10 77190202 77190232 -68399056 + AT_rich Low_complexity Low_complexity 1 30 0 656 295 163 68 chr10 77190388 77190768 -68398520 + L2 LINE L2 2857 3272 0 374 246 31 11 chr10 77190780 77190900 -68398388 - MIR SINE MIR -57 151 24 292 361 98 8 chr10 77190918 77191040 -68398248 - MIR SINE MIR -74 134 1 637 40 0 95 chr10 77191093 77191349 -68397939 + (TA)n Simple_repeat Simple_repeat 1 231 0 237 98 16 33 chr10 77191361 77191422 -68397866 + (TA)n Simple_repeat Simple_repeat 2 61 0 751 288 89 22 chr10 77191890 77192251 -68397037 - L1ME LINE L1 -514 5650 5266 268 274 189 47 chr10 77192434 77192540 -68396748 - MIR SINE MIR -70 192 72 2556 40 7 3 chr10 77195383 77195684 -68393604 + AluY SINE Alu 1 302 -9 601 243 47 14 chr10 77195871 77195977 -68393311 - MIR SINE MIR -3 259 145 1414 158 30 21 chr10 77195977 77196211 -68393077 + MER46A DNA MER2_type 1 236 0 601 243 47 14 chr10 77196211 77196252 -68393036 - MIR SINE MIR -117 145 107 803 64 0 0 chr10 77196260 77196354 -68392934 + AluSp/q SINE Alu 208 301 -12 378 0 0 0 chr10 77196354 77196396 -68392892 + (TA)n Simple_repeat Simple_repeat 2 43 0 912 58 83 0 chr10 77196396 77196516 -68392772 + MER85 DNA T2_type 10 139 0 276 262 202 0 chr10 77196516 77196600 -68392688 - MIR SINE MIR -154 108 8 291 212 0 76 chr10 77196676 77196742 -68392546 + MIR3 SINE MIR 111 171 -37 226 200 12 153 chr10 77196765 77196850 -68392438 - L2 LINE L2 -1 3271 3199 812 168 37 6 chr10 77197751 77197912 -68391376 + Tigger4(Zombi) DNA MER2_type 2566 2731 0 2606 165 47 83 chr10 77198419 77199057 -68390231 + L1MA9 LINE L1 5395 6009 -303 308 262 29 19 chr10 77199221 77199324 -68389964 + L1M4 LINE L1 3081 3184 -2962 203 276 10 31 chr10 77199341 77199439 -68389849 + GA-rich Low_complexity Low_complexity 4 99 0 2094 70 3 30 chr10 77199677 77199977 -68389311 + AluSp SINE Alu 22 313 0 465 278 135 42 chr10 77199993 77200400 -68388888 - MLT1K LTR MaLR -7 581 137 1933 140 14 0 chr10 77201077 77201356 -68387932 - AluSq SINE Alu -15 298 16 802 212 52 24 chr10 77201461 77201673 -68387615 - MIR SINE MIR -24 238 21 291 297 135 0 chr10 77201908 77202100 -68387188 - L1M4 LINE L1 -3281 2865 2648 455 242 46 41 chr10 77202161 77202196 -68387092 - L1M4 LINE L1 -3634 2512 2479 1911 191 43 3 chr10 77202196 77202547 -68386741 - MLT1A1 LTR MaLR 0 365 1 455 242 46 41 chr10 77202547 77202683 -68386605 - L1M4 LINE L1 -3667 2479 2337 2340 172 26 34 chr10 77202683 77203101 -68386187 - MER47B DNA MER2_type -2 416 2 455 242 46 41 chr10 77203101 77203147 -68386141 - L1M4 LINE L1 -3809 2337 2293 1349 186 0 0 chr10 77203157 77203377 -68385911 - ERVL LTR ERVL -1111 4653 4434 3046 167 8 21 chr10 77203402 77203917 -68385371 - MLT2B3 LTR ERVL -46 508 1 7626 154 30 11 chr10 77203917 77205232 -68384056 - ERVL-B3 LTR ERVL -7 5757 4419 767 261 20 60 chr10 77205352 77205601 -68383687 + MLT1F LTR MaLR 304 542 0 1770 158 7 0 chr10 77205786 77206059 -68383229 - 7SLRNA srpRNA srpRNA 0 320 46 1278 284 64 24 chr10 77206118 77206788 -68382500 + L1MEc LINE L1 586 1282 -5114 1832 129 0 35 chr10 77206808 77207126 -68382162 + AluSx SINE Alu 1 307 -5 2276 111 0 3 chr10 77207634 77207931 -68381357 - AluSx SINE Alu -16 296 1 30 59 0 0 chr10 77207940 77207991 -68381297 + AT_rich Low_complexity Low_complexity 1 51 0 420 232 47 46 chr10 77208173 77208371 -68380917 + MLT1L LTR MaLR 95 358 -257 281 258 210 16 chr10 77208405 77208529 -68380759 + MLT1L LTR MaLR 460 607 -8 370 311 85 60 chr10 77208533 77208816 -68380472 - MLT1K LTR MaLR -107 481 192 1993 127 13 25 chr10 77209026 77209165 -68380123 + AluSx SINE Alu 1 140 -172 1996 132 24 3 chr10 77209165 77209461 -68379827 + AluSx SINE Alu 1 302 -10 1993 127 13 25 chr10 77209461 77209637 -68379651 + AluSx SINE Alu 140 312 0 546 330 126 34 chr10 77209712 77210329 -68378959 - L2 LINE L2 -2 3270 2596 2382 98 3 0 chr10 77210357 77210663 -68378625 + AluSx SINE Alu 1 307 -5 212 152 0 87 chr10 77210923 77210969 -68378319 + MIR SINE MIR 88 129 -79 249 157 137 0 chr10 77211150 77211201 -68378087 + L2 LINE L2 3215 3272 0 436 227 9 55 chr10 77211698 77211808 -68377480 - MER45 DNA AcHobo -73 105 1 1266 124 10 40 chr10 77211864 77212065 -68377223 + MER2 DNA MER2_type 3 197 -148 25 90 0 0 chr10 77212069 77212136 -68377152 + AT_rich Low_complexity Low_complexity 1 67 0 2382 105 0 0 chr10 77213245 77213550 -68375738 + AluSq SINE Alu 1 305 -8 556 125 25 0 chr10 77213847 77213947 -68375341 - AluSp/q SINE Alu 0 307 206 242 311 8 16 chr10 77214182 77214304 -68374984 - L1M4 LINE L1 -1354 4792 4672 22 0 0 0 chr10 77214353 77214375 -68374913 + AT_rich Low_complexity Low_complexity 1 22 0 3068 213 40 61 chr10 77214380 77215451 -68373837 - L1ME1 LINE L1 -31 6135 5093 28 0 0 0 chr10 77215461 77215489 -68373799 + AT_rich Low_complexity Low_complexity 1 28 0 232 91 23 0 chr10 77215527 77215571 -68373717 + LTR66 LTR ERVL 395 439 -171 334 186 10 10 chr10 77215582 77215679 -68373609 + (TA)n Simple_repeat Simple_repeat 2 98 0 493 209 94 98 chr10 77215679 77215913 -68373375 - L1ME1 LINE L1 -1059 5087 4855 250 258 15 0 chr10 77215921 77215987 -68373301 + L1MC/D LINE L1 5738 5804 -2004 292 151 0 27 chr10 77216008 77216081 -68373207 + GA-rich Low_complexity Low_complexity 2 72 0 395 278 166 0 chr10 77216309 77216460 -68372828 - MIR SINE MIR -67 195 20 234 0 0 0 chr10 77216764 77216790 -68372498 + (A)n Simple_repeat Simple_repeat 1 26 0 332 283 115 115 chr10 77217319 77217874 -68371414 - L1M2 LINE L1 -5790 1059 505 286 294 111 0 chr10 77218928 77219040 -68370248 + MIR SINE MIR 42 164 -58 508 251 164 6 chr10 77219054 77219237 -68370051 - MER58A DNA MER1_type -1 223 12 1996 138 3 10 chr10 77219765 77220062 -68369226 + AluSx SINE Alu 1 295 -17 612 131 10 0 chr10 77220063 77220162 -68369126 + MER41B-int LTR ERV1 2847 2946 -3000 * 13043 97 24 8 chr10 77220149 77222391 -68366897 + MER41B-int LTR ERV1 2856 5943 -3 3290 124 83 2 chr10 77222392 77222898 -68366390 + MER41B LTR ERV1 1 547 -88 276 155 52 0 chr10 77222898 77222956 -68366332 + L1M4 LINE L1 4942 5002 -1144 797 93 6 99 chr10 77223322 77223494 -68365794 - AluSx SINE Alu -155 157 2 2972 117 119 6 chr10 77223496 77224070 -68365218 - MER41B-int LTR ERV1 -3276 2670 2212 845 157 50 0 chr10 77224086 77224226 -68365062 - MER41B-int LTR ERV1 -4915 2622 2476 * 2213 120 69 9 chr10 77224225 77224575 -68364713 - MER41B-int LTR ERV1 -4184 1762 1392 4615 144 13 0 chr10 77224576 77225257 -68364031 - MER41B-int LTR ERV1 -5256 690 1 876 71 0 0 chr10 77225262 77225375 -68363913 - MER41B LTR ERV1 -8 627 515 2046 113 0 0 chr10 77225414 77225688 -68363600 + AluSx SINE Alu 1 274 -38 1035 195 113 60 chr10 77225805 77226123 -68363165 - MSTB1 LTR MaLR -1 431 97 648 251 118 41 chr10 77226645 77226916 -68362372 + Charlie2 DNA MER1_type 33 324 -2538 2039 113 7 3 chr10 77226916 77227200 -68362088 + AluSx SINE Alu 1 285 -27 1506 196 46 53 chr10 77227227 77227719 -68361569 + Charlie2 DNA MER1_type 2173 2667 -195 2615 116 21 93 chr10 77227719 77227876 -68361412 + L1MA4A LINE L1 5816 5983 -320 1664 186 0 27 chr10 77227876 77228172 -68361116 + AluJb SINE Alu 1 288 -24 2615 116 21 93 chr10 77228172 77228203 -68361085 + L1MA4A LINE L1 5983 6015 -288 198 118 0 0 chr10 77228203 77228237 -68361051 + (CAGAGA)n Simple_repeat Simple_repeat 3 36 0 2615 116 21 93 chr10 77228237 77228573 -68360715 + L1MA4A LINE L1 6015 6303 0 1506 196 46 53 chr10 77228573 77228614 -68360674 + Charlie2 DNA MER1_type 2667 2862 0 790 263 75 44 chr10 77228907 77229429 -68359859 - L1M4 LINE L1 -1445 4701 4164 1685 219 87 7 chr10 77230392 77230817 -68358471 - MLT1C LTR MaLR 0 467 9 241 320 73 68 chr10 77231672 77231878 -68357410 - MIR3 SINE MIR -1 207 1 340 269 108 65 chr10 77232197 77232231 -68357057 + MIR SINE MIR 69 100 -162 2161 108 0 38 chr10 77232231 77232546 -68356742 - AluSc SINE Alu -6 303 1 340 269 108 65 chr10 77232546 77232697 -68356591 + MIR SINE MIR 100 262 0 208 200 146 0 chr10 77237504 77237559 -68351729 - MIR3 SINE MIR -133 75 13 357 318 0 9 chr10 77237598 77237705 -68351583 + L2 LINE L2 3160 3265 -7 21 0 0 0 chr10 77238803 77238824 -68350464 + AT_rich Low_complexity Low_complexity 1 21 0 1082 50 0 0 chr10 77240000 77240141 -68349147 + L1PA5 LINE L1 5919 6059 -95 340 313 111 42 chr10 77240292 77240580 -68348708 - L1M4c LINE L1 -5170 1214 907 2111 91 4 4 chr10 77241102 77241378 -68347910 + AluSg SINE Alu 1 276 -34 557 318 66 16 chr10 77242201 77242459 -68346829 + MLT1I LTR MaLR 79 349 -60 395 304 73 23 chr10 77242557 77242758 -68346530 + MIR SINE MIR 23 232 -30 2314 65 13 16 chr10 77243288 77243598 -68345690 + AluY SINE Alu 1 309 -2 1931 110 0 24 chr10 77244055 77244345 -68344943 - AluSq SINE Alu 0 313 31 402 203 0 0 chr10 77244345 77244424 -68344864 + pTR5 LTR ERV1 743 821 -1617 3988 107 2 2 chr10 77244597 77245138 -68344150 - THE1-int LTR MaLR -769 811 271 683 70 147 32 chr10 77245138 77245261 -68344027 - THE1B LTR MaLR -243 132 1 879 289 62 4 chr10 77245261 77245517 -68343771 - MLT1F LTR MaLR -234 308 38 517 269 29 116 chr10 77245535 77245881 -68343407 - MLT1F-int LTR MaLR 0 1371 1056 449 319 40 36 chr10 77246587 77246863 -68342425 - MLT1F-int LTR MaLR -795 576 300 1641 245 71 42 chr10 77247034 77247553 -68341735 - MLT1F LTR MaLR 0 542 9 366 317 13 13 chr10 77248015 77248239 -68341049 + L1MEc LINE L1 1599 1822 -4574 449 267 41 37 chr10 77248343 77248734 -68340554 + L1MEc LINE L1 1980 2415 -3890 1997 140 12 39 chr10 77248740 77249076 -68340212 - ERVL LTR ERVL -580 5184 4858 * 2970 129 23 12 chr10 77249066 77249545 -68339743 + ERVL LTR ERVL 2356 2839 -2925 4692 245 74 38 chr10 77249676 77252090 -68337198 - L1M4c LINE L1 -4115 2531 4 637 348 60 61 chr10 77253591 77254331 -68334957 + L2 LINE L2 2236 2967 -305 1692 164 39 3 chr10 77254336 77254622 -68334666 + MER61D LTR ERV1 206 501 0 642 273 58 0 chr10 77254625 77254797 -68334491 - MLT1J LTR MaLR -312 199 18 1326 201 17 78 chr10 77254983 77255341 -68333947 - MLT1A2 LTR MaLR 0 374 39 713 221 77 5 chr10 77255344 77255539 -68333749 - L1ME LINE L1 -636 5526 5318 22 120 0 0 chr10 77255556 77255631 -68333657 + AT_rich Low_complexity Low_complexity 1 75 0 29 70 0 0 chr10 77255657 77255714 -68333574 + AT_rich Low_complexity Low_complexity 1 57 0 296 271 28 9 chr10 77255774 77255881 -68333407 + (TA)n Simple_repeat Simple_repeat 2 110 0 814 247 60 78 chr10 77255882 77255916 -68333372 - L1ME LINE L1 -877 5269 5236 3342 189 103 11 chr10 77255916 77256672 -68332616 + LTR1B LTR ERV1 1 826 0 814 247 60 78 chr10 77256672 77256793 -68332495 - L1ME LINE L1 -910 5236 5114 520 94 0 0 chr10 77256793 77256878 -68332410 - L1PA16 LINE L1 -5 6161 6077 814 247 60 78 chr10 77256878 77257235 -68332053 - L1ME LINE L1 -1032 5114 4765 189 0 0 0 chr10 77257566 77257587 -68331701 + (CA)n Simple_repeat Simple_repeat 2 22 0 1778 197 0 0 chr10 77258270 77258575 -68330713 + AluJb SINE Alu 1 305 -7 2390 131 17 0 chr10 77258792 77259150 -68330138 - THE1B LTR MaLR 0 364 1 699 212 159 0 chr10 77259820 77259990 -68329298 + MER105 DNA DNA 2 198 -6 209 371 0 0 chr10 77260866 77260936 -68328352 + MIR SINE MIR 116 185 -77 210 150 0 0 chr10 77261408 77261448 -68327840 + (CA)n Simple_repeat Simple_repeat 2 41 0 361 252 112 61 chr10 77261455 77261749 -68327539 - L1MC4 LINE L1 -124 7918 7610 1874 152 0 14 chr10 77261810 77262100 -68327188 + AluJo SINE Alu 11 296 -16 778 296 41 25 chr10 77262304 77262660 -68326628 - L1MC4 LINE L1 -476 7410 6979 877 236 26 5 chr10 77262680 77262910 -68326378 - L1MC4 LINE L1 -989 6904 6572 303 231 44 0 chr10 77263008 77263099 -68326189 - L1MC4 LINE L1 -5 8037 7943 252 100 0 40 chr10 77263132 77263182 -68326106 - FLAM SINE Alu -1 132 89 2401 204 2 0 chr10 77263362 77263871 -68325417 - L1P LINE L1 -3291 2855 2346 204 216 0 0 chr10 77264689 77264726 -68324562 + (CA)n Simple_repeat Simple_repeat 2 38 0 288 242 15 0 chr10 77264965 77265031 -68324257 + MER103 DNA DNA 57 123 -43 471 248 140 62 chr10 77265352 77265786 -68323502 + MLT1H1 LTR MaLR 14 489 -66 728 159 0 43 chr10 77266036 77266174 -68323114 + MER3 DNA MER1_type 78 209 0 22 35 0 0 chr10 77266538 77266567 -68322721 + AT_rich Low_complexity Low_complexity 1 29 0 304 198 75 75 chr10 77267395 77267501 -68321787 + MER5B DNA MER1_type 5 110 -68 24 32 0 0 chr10 77268141 77268172 -68321116 + AT_rich Low_complexity Low_complexity 1 31 0 290 159 0 0 chr10 77269121 77269160 -68320128 - MER45A DNA AcHobo -30 148 110 310 73 0 0 chr10 77269160 77269201 -68320087 + MADE1 DNA Mariner 1 41 -39 293 270 0 40 chr10 77270434 77270534 -68318754 - LTR33 LTR ERVL -14 507 412 735 271 34 38 chr10 77270645 77270690 -68318598 - LTR33 LTR ERVL -275 246 202 1750 152 67 45 chr10 77270690 77271046 -68318242 + THE1B LTR MaLR 1 364 0 735 271 34 38 chr10 77271046 77271236 -68318052 - LTR33 LTR ERVL -319 202 12 21 36 0 0 chr10 77271266 77271294 -68317994 + AT_rich Low_complexity Low_complexity 1 28 0 197 306 69 0 chr10 77271305 77271377 -68317911 + L2 LINE L2 3195 3271 -1 2871 161 101 6 chr10 77271414 77271948 -68317340 - LTR36 LTR ERV1 -24 587 3 1134 174 61 9 chr10 77272047 77272322 -68316966 + AluJb SINE Alu 85 370 0 470 320 52 18 chr10 77272461 77272484 -68316804 - MLT1J LTR MaLR -200 311 290 4184 90 40 2 chr10 77272484 77273062 -68316226 - MER4A LTR ERV1 0 600 1 470 320 52 18 chr10 77273062 77273252 -68316036 - MLT1J LTR MaLR -221 290 54 27 29 0 0 chr10 77273669 77273703 -68315585 + AT_rich Low_complexity Low_complexity 1 34 0 24 0 0 0 chr10 77273785 77273809 -68315479 + AT_rich Low_complexity Low_complexity 1 24 0 1378 204 96 0 chr10 77274316 77274596 -68314692 + AluJo SINE Alu 1 307 -5 583 115 23 0 chr10 77274872 77274959 -68314329 - AluSc SINE Alu -16 293 205 525 302 5 21 chr10 77275129 77275321 -68313967 + MLT1J LTR MaLR 231 419 -92 501 223 91 0 chr10 77275690 77275811 -68313477 - MER94 DNA DNA -2 132 1 293 328 8 45 chr10 77276140 77276274 -68313014 - MIR SINE MIR -44 218 90 2291 82 3 13 chr10 77276431 77276746 -68312542 + THE1C LTR MaLR 1 312 -63 221 0 35 0 chr10 77277098 77277127 -68312161 + (CA)n Simple_repeat Simple_repeat 2 31 0 2223 98 10 0 chr10 77277198 77277503 -68311785 + AluY SINE Alu 1 308 -3 427 168 40 0 chr10 77277550 77277631 -68311657 + L1M4 LINE L1 5517 5606 -568 2388 101 0 13 chr10 77277631 77277947 -68311341 + AluSx SINE Alu 1 312 0 479 284 83 0 chr10 77278063 77278247 -68311041 - L1MC4a LINE L1 -374 5788 5714 2384 97 0 10 chr10 77278537 77278847 -68310441 - AluSx SINE Alu -5 307 1 434 163 41 31 chr10 77279246 77279344 -68309944 - AluSg/x SINE Alu -20 292 194 325 189 25 16 chr10 77279415 77279537 -68309751 + CT-rich Low_complexity Low_complexity 2 124 0 1035 245 164 0 chr10 77280025 77280311 -68308977 + MLT1G LTR MaLR 10 342 -248 1761 206 125 82 chr10 77280323 77281043 -68308245 + LTR1B LTR ERV1 1 751 -75 345 279 157 0 chr10 77281156 77281296 -68307992 + MLT1G LTR MaLR 318 479 -76 1059 220 104 52 chr10 77281459 77281805 -68307483 - MLT1A1 LTR MaLR 0 365 2 183 329 197 0 chr10 77282372 77282448 -68306840 - L2 LINE L2 -5 3267 3177 2382 71 10 0 chr10 77283446 77283754 -68305534 - AluY SINE Alu 0 311 1 253 250 0 0 chr10 77284069 77284121 -68305167 + Tigger5 DNA MER2_type 4 55 -2268 201 278 75 68 chr10 77284359 77284492 -68304796 - MIR3 SINE MIR -69 139 6 398 343 6 17 chr10 77284627 77284802 -68304486 + L2 LINE L2 3109 3281 -32 1253 199 100 96 chr10 77284824 77285386 -68303902 - LTR49 LTR ERV1 -30 565 2 403 269 46 17 chr10 77287428 77287603 -68301685 - L1MC/D LINE L1 -1989 5819 5640 2157 130 0 3 chr10 77287612 77287911 -68301377 - AluSx SINE Alu -14 298 1 1793 164 126 15 chr10 77288782 77289172 -68300116 + Tigger2a DNA MER2_type 1 433 -1 493 322 27 7 chr10 77289907 77290053 -68299235 - MIR3 SINE MIR -57 151 3 354 412 71 12 chr10 77290501 77290756 -68298532 - L2 LINE L2 -13 3259 2990 184 284 0 99 chr10 77291539 77291620 -68297668 - L2 LINE L2 -3240 74 2 384 346 35 58 chr10 77291736 77292083 -68297205 - L2 LINE L2 -1 3271 2933 22 0 0 0 chr10 77292695 77292717 -68296571 + AT_rich Low_complexity Low_complexity 1 22 0 1960 162 61 5 chr10 77293022 77293430 -68295858 - Charlie1 DNA MER1_type -171 2590 2160 3378 238 72 37 chr10 77393868 77394158 -68195130 + L1MB7 LINE L1 3314 3592 -2554 2106 118 0 7 chr10 77394158 77394474 -68194814 - AluSx SINE Alu 0 314 1 3378 238 72 37 chr10 77394474 77394498 -68194790 + L1MB7 LINE L1 3592 3614 -2532 2191 108 0 3 chr10 77394498 77394786 -68194502 - AluSq SINE Alu -26 287 1 3378 238 72 37 chr10 77394786 77395848 -68193440 + L1MB7 LINE L1 3614 4741 -1405 1826 136 0 63 chr10 77395891 77396192 -68193096 - AluSx SINE Alu -30 282 1 740 172 94 43 chr10 77396192 77396425 -68192863 + L1ME2 LINE L1 5783 6027 -137 369 238 99 108 chr10 77396440 77396663 -68192625 + L1MC4 LINE L1 7821 8041 -1 2152 148 0 0 chr10 77397576 77397874 -68191414 - AluSx SINE Alu -14 298 1 1923 143 23 10 chr10 77398678 77398978 -68190310 + AluJb SINE Alu 1 304 -8 926 200 65 182 chr10 77399066 77399561 -68189727 - L1ME3A LINE L1 -30 6140 5704 2296 98 0 13 chr10 77399600 77399917 -68189371 + AluSq SINE Alu 1 313 0 221 231 0 0 chr10 77399917 77399956 -68189332 - L2 LINE L2 -14 3299 3261 1556 159 73 18 chr10 77400210 77400537 -68188751 + L1MB3 LINE L1 5726 6070 -113 2404 45 0 14 chr10 77400586 77400874 -68188414 - AluY SINE Alu -5 306 23 182 327 96 29 chr10 77401249 77401353 -68187935 - L2 LINE L2 -12 3301 3191 2295 99 3 3 chr10 77401834 77402137 -68187151 + AluSq SINE Alu 1 303 -10 2101 114 11 0 chr10 77402186 77402467 -68186821 + AluSq SINE Alu 7 290 -23 235 0 0 54 chr10 77402472 77402509 -68186779 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 2934 185 51 92 chr10 77402510 77402716 -68186572 + L1MB7 LINE L1 5048 5261 -923 2087 130 0 3 chr10 77402716 77403015 -68186273 + AluSx SINE Alu 1 298 -14 2934 185 51 92 chr10 77403015 77403989 -68185299 + L1MB7 LINE L1 5261 6175 -9 2154 133 3 3 chr10 77404279 77404581 -68184707 - AluSx SINE Alu -10 302 1 24 32 0 0 chr10 77404593 77404624 -68184664 + AT_rich Low_complexity Low_complexity 1 31 0 191 336 64 36 chr10 77405098 77405238 -68184050 + MIR SINE MIR 20 163 -99 198 425 0 9 chr10 77405956 77406069 -68183219 + L2 LINE L2 2979 3090 -182 453 217 54 54 chr10 77406215 77406344 -68182944 + L2 LINE L2 3169 3297 -16 2421 82 0 7 chr10 77406437 77406743 -68182545 + AluY SINE Alu 2 305 -6 255 185 0 108 chr10 77407075 77407123 -68182165 - MER5B DNA MER1_type 0 178 137 2496 120 11 8 chr10 77407123 77407497 -68181791 - THE1C LTR MaLR 0 375 1 255 185 0 108 chr10 77407497 77407513 -68181775 - MER5B DNA MER1_type -41 137 121 390 280 20 10 chr10 77407549 77407649 -68181639 - MER5B DNA MER1_type -50 128 28 286 227 144 31 chr10 77408935 77409032 -68180256 - MIR3 SINE MIR -9 199 92 2305 95 38 46 chr10 77409108 77409327 -68179961 + THE1B LTR MaLR 1 217 -147 2424 74 0 3 chr10 77409327 77409626 -68179662 - AluSp SINE Alu -15 298 1 2305 95 38 46 chr10 77409626 77409773 -68179515 + THE1B LTR MaLR 217 364 0 246 263 0 18 chr10 77409847 77409904 -68179384 + MIR SINE MIR 16 71 -137 1563 153 0 4 chr10 77409944 77410173 -68179115 - AluJb SINE Alu -16 296 69 962 45 0 0 chr10 77410173 77410308 -68178980 + AluSp/q SINE Alu 189 323 0 436 158 145 0 chr10 77410350 77410426 -68178862 - AluJb SINE Alu -222 90 4 2133 112 3 57 chr10 77410509 77410840 -68178448 - AluSq SINE Alu 0 313 1 836 327 34 12 chr10 77410959 77411286 -68178002 + L2 LINE L2 2596 2929 -385 1307 219 18 57 chr10 77411310 77411693 -68177595 + MLT1B LTR MaLR 23 390 0 311 320 78 30 chr10 77411747 77411978 -68177310 + L2 LINE L2 1802 2043 -1271 1677 110 9 0 chr10 77411979 77412206 -68177082 - AluSg/x SINE Alu -15 297 69 267 325 103 16 chr10 77412207 77412333 -68176955 + L2 LINE L2 2345 2481 -833 185 252 159 28 chr10 77412638 77412745 -68176543 - L2 LINE L2 -1261 2053 1933 242 278 0 0 chr10 77412779 77412833 -68176455 + MIR SINE MIR 26 79 -129 1425 165 0 16 chr10 77412835 77413090 -68176198 + MER41C LTR ERV1 1 251 -303 2187 124 3 0 chr10 77413388 77413678 -68175610 - AluSx SINE Alu -21 291 1 494 289 151 18 chr10 77413678 77413749 -68175539 - MIR SINE MIR -2 260 200 796 128 8 30 chr10 77413749 77413882 -68175406 - FLAM_C SINE Alu -3 130 1 494 289 151 18 chr10 77413882 77414035 -68175253 - MIR SINE MIR -62 200 6 830 108 85 192 chr10 77415230 77415309 -68173979 + MER46A DNA MER2_type 3 89 -2642 1998 130 0 7 chr10 77415309 77415585 -68173703 - AluSq SINE Alu -39 274 1 830 108 85 192 chr10 77415585 77415664 -68173624 + MER46A DNA MER2_type 89 125 -2606 1976 147 3 3 chr10 77415664 77415963 -68173325 - AluJo SINE Alu -13 299 1 830 108 85 192 chr10 77415963 77416063 -68173225 + MER46A DNA MER2_type 125 234 -2 705 164 35 0 chr10 77416883 77416999 -68172289 + FLAM_C SINE Alu 1 120 -13 324 0 0 0 chr10 77416999 77417035 -68172253 + (TA)n Simple_repeat Simple_repeat 2 37 0 2129 96 24 7 chr10 77417583 77417876 -68171412 - AluSq SINE Alu -15 298 1 719 289 28 32 chr10 77418154 77418403 -68170885 + MIR SINE MIR 3 250 -12 2340 117 0 0 chr10 77418403 77418710 -68170578 + AluSx SINE Alu 1 307 -5 224 167 0 0 chr10 77418846 77418888 -68170400 + L2 LINE L2 3267 3308 -5 309 268 255 6 chr10 77419045 77419202 -68170086 - MIR SINE MIR -2 260 65 354 273 99 25 chr10 77419523 77419684 -68169604 - L1ME LINE L1 -367 5754 5582 2160 108 3 0 chr10 77419839 77420125 -68169163 - AluSx SINE Alu -25 287 1 236 329 0 27 chr10 77421206 77421279 -68168009 + MIR3 SINE MIR 1 71 -137 259 289 67 11 chr10 77421391 77421481 -68167807 + L2 LINE L2 3168 3262 -10 2279 83 0 3 chr10 77421583 77421872 -68167416 - AluY SINE Alu -18 293 6 886 86 0 39 chr10 77421901 77422029 -68167259 + AluSg/x SINE Alu 190 312 0 2307 104 0 0 chr10 77422166 77422465 -68166823 - AluSc SINE Alu 0 309 11 2125 103 0 17 chr10 77423536 77423865 -68165423 - AluSq SINE Alu 0 324 1 231 36 0 0 chr10 77423936 77423964 -68165324 + (A)n Simple_repeat Simple_repeat 1 28 0 1958 152 7 0 chr10 77425785 77426081 -68163207 + AluSx SINE Alu 1 298 -14 479 253 112 18 chr10 77426137 77426262 -68163026 - MIR SINE MIR 0 262 115 1514 168 88 0 chr10 77426262 77426559 -68162729 + AluJo SINE Alu 1 320 0 479 253 112 18 chr10 77426559 77426602 -68162686 - MIR SINE MIR -147 115 77 195 42 0 0 chr10 77426954 77426978 -68162310 + (T)n Simple_repeat Simple_repeat 1 24 0 2314 92 3 0 chr10 77427315 77427609 -68161679 + AluSx SINE Alu 1 295 -17 500 246 24 54 chr10 77427987 77428154 -68161134 + MIR SINE MIR 4 165 -97 1613 150 82 11 chr10 77429508 77429788 -68159500 + AluJo SINE Alu 1 300 -12 29 28 0 0 chr10 77430155 77430191 -68159097 + AT_rich Low_complexity Low_complexity 1 36 0 23 0 0 0 chr10 77431935 77431958 -68157330 + AT_rich Low_complexity Low_complexity 1 23 0 483 265 129 24 chr10 77432248 77432418 -68156870 + MIR SINE MIR 49 236 -26 2204 118 7 0 chr10 77434930 77435227 -68154061 + AluSx SINE Alu 1 299 -13 2217 125 0 3 chr10 77435577 77435889 -68153399 + AluSx SINE Alu 1 311 -1 4065 91 7 11 chr10 77436130 77436671 -68152617 - L1PB1 LINE L1 -3 6148 5610 4262 89 13 0 chr10 77437106 77437854 -68151434 + L1P3 LINE L1 4783 5536 -618 954 193 142 0 chr10 77437884 77438117 -68151171 + L1ME2 LINE L1 5793 6058 -106 709 207 114 45 chr10 77438180 77438426 -68150862 + L1MC4 LINE L1 6366 6628 -1414 556 211 0 0 chr10 77438418 77438527 -68150761 + L1MC4 LINE L1 7484 7592 -450 * 3517 247 106 38 chr10 77438528 77439915 -68149373 + L1M4 LINE L1 14 1495 -5047 226 182 36 0 chr10 77439912 77439967 -68149321 + L1MB3 LINE L1 6120 6176 -7 * 2336 200 39 14 chr10 77439972 77440757 -68148531 + L1M4 LINE L1 5246 6057 -615 668 186 7 55 chr10 77440757 77440902 -68148386 + FRAM SINE Alu 22 159 -17 1584 180 4 18 chr10 77440904 77441176 -68148112 + AluJb SINE Alu 1 268 -44 306 0 0 0 chr10 77441758 77441792 -68147496 + (CA)n Simple_repeat Simple_repeat 1 34 0 538 248 195 0 chr10 77441816 77441965 -68147323 - MIR SINE MIR -57 205 28 222 208 0 0 chr10 77442675 77442728 -68146560 + (TA)n Simple_repeat Simple_repeat 1 53 0 518 193 0 0 chr10 77444035 77444118 -68145170 + AluS SINE Alu 2 84 -229 1026 244 50 20 chr10 77444609 77444912 -68144376 - L2 LINE L2 -509 2805 2494 2215 103 0 0 chr10 77444948 77445295 -68143993 + AluSx SINE Alu 1 347 0 2088 97 0 0 chr10 77445302 77445560 -68143728 + AluSx SINE Alu 1 258 -54 279 54 0 0 chr10 77445664 77445701 -68143587 + (CA)n Simple_repeat Simple_repeat 2 38 0 329 326 68 62 chr10 77445751 77445913 -68143375 - L1ME4a LINE L1 -256 5865 5705 1745 187 3 13 chr10 77445913 77446223 -68143065 - AluJb SINE Alu -5 307 1 329 326 68 62 chr10 77446223 77446397 -68142891 - L1ME4a LINE L1 -416 5705 5527 200 195 0 0 chr10 77447124 77447165 -68142123 + A-rich Low_complexity Low_complexity 1 41 0 2271 118 3 0 chr10 77447841 77448146 -68141142 + AluSq SINE Alu 1 306 -7 1276 179 15 102 chr10 77448438 77448762 -68140526 - AluJo SINE Alu -16 296 1 2275 123 0 0 chr10 77448768 77449069 -68140219 - AluSx SINE Alu -11 301 1 335 61 184 0 chr10 77449069 77449118 -68140170 - AluSg/x SINE Alu -159 141 84 1241 195 0 5 chr10 77449118 77449339 -68139949 - AluJo SINE Alu -92 220 1 256 250 0 0 chr10 77449355 77449411 -68139877 - L2 LINE L2 0 3313 3258 2270 108 0 0 chr10 77449528 77449825 -68139463 - AluSg SINE Alu -13 297 1 2282 119 0 0 chr10 77450771 77451082 -68138206 + AluSx SINE Alu 1 311 -1 23 78 0 0 chr10 77451440 77451491 -68137797 + AT_rich Low_complexity Low_complexity 1 51 0 21 0 0 0 chr10 77451718 77451739 -68137549 + AT_rich Low_complexity Low_complexity 1 21 0 465 66 0 0 chr10 77452710 77452771 -68136517 + (TA)n Simple_repeat Simple_repeat 1 61 0 2102 118 10 29 chr10 77452771 77453085 -68136203 - AluSx SINE Alu 0 312 5 24 0 0 0 chr10 77453505 77453529 -68135759 + AT_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr10 77453900 77453928 -68135360 + AT_rich Low_complexity Low_complexity 1 28 0 340 219 11 93 chr10 77454018 77454201 -68135087 - L2 LINE L2 -103 3210 3043 2291 107 7 3 chr10 77454614 77454923 -68134365 - AluSx SINE Alu -2 310 1 610 241 48 18 chr10 77455473 77455639 -68133649 + MIR SINE MIR 13 183 -79 248 243 215 14 chr10 77455644 77455788 -68133500 + L1MDa LINE L1 1526 1698 -4842 1144 172 4 73 chr10 77455812 77456045 -68133243 + MER20 DNA MER1_type 2 218 -1 6356 111 9 17 chr10 77456085 77456333 -68132955 + L1PA16 LINE L1 4144 4393 -1773 339 25 0 0 chr10 77456333 77456373 -68132915 + (CA)n Simple_repeat Simple_repeat 2 41 0 6356 111 9 17 chr10 77456373 77457420 -68131868 + L1PA16 LINE L1 4393 5455 -711 2140 106 0 24 chr10 77457420 77457746 -68131542 - AluSx SINE Alu 0 319 1 6356 111 9 17 chr10 77457746 77458452 -68130836 + L1PA16 LINE L1 5455 6166 0 2072 124 13 0 chr10 77458621 77458919 -68130369 + AluSq SINE Alu 1 302 -11 2145 108 0 3 chr10 77458922 77459239 -68130049 + AluSp SINE Alu 1 316 0 666 121 40 0 chr10 77459987 77460086 -68129202 - Tigger3(Golem) DNA MER2_type 0 3038 2936 666 138 89 24 chr10 77460068 77460191 -68129097 - Tigger3(Golem) DNA MER2_type -100 2929 2799 298 218 36 0 chr10 77460192 77460247 -68129041 - Tigger3(Golem) DNA MER2_type -2972 57 1 2207 106 0 10 chr10 77460585 77460886 -68128402 + AluSx SINE Alu 1 298 -14 1780 172 10 7 chr10 77460910 77461207 -68128081 + AluJo SINE Alu 1 298 -14 2310 114 0 0 chr10 77461430 77461728 -68127560 + AluSc SINE Alu 1 298 -11 2149 121 30 7 chr10 77461737 77462042 -68127246 + AluSx SINE Alu 1 312 0 191 322 126 49 chr10 77462617 77462760 -68126528 + L2 LINE L2 3119 3272 0 1775 146 6 47 chr10 77463217 77463344 -68125944 + AluJo SINE Alu 3 134 -178 2070 138 0 0 chr10 77463344 77463635 -68125653 - AluSx SINE Alu -19 293 3 1775 146 6 47 chr10 77463635 77463829 -68125459 + AluJo SINE Alu 134 311 -1 1968 100 93 0 chr10 77464279 77464559 -68124729 + AluSx SINE Alu 1 306 -6 402 57 0 0 chr10 77464559 77464578 -68124710 + (CA)n Simple_repeat Simple_repeat 1 72 0 402 57 0 0 chr10 77464578 77464631 -68124657 + (CA)n Simple_repeat Simple_repeat 2 54 0 273 139 0 0 chr10 77465922 77465965 -68123323 - MIR SINE MIR 0 262 220 1683 202 64 17 chr10 77465973 77466124 -68123164 - HsTC2 DNA Tc2 2 1900 1758 1949 131 7 23 chr10 77466124 77466429 -68122859 + AluSx SINE Alu 1 300 -12 1683 202 64 17 chr10 77466429 77466697 -68122591 - HsTC2 DNA Tc2 -140 1758 1285 305 194 132 104 chr10 77466687 77466831 -68122457 - HsTC2 DNA Tc2 -1747 151 4 * 655 325 15 5 chr10 77466883 77467083 -68122205 - MIR SINE MIR -54 208 7 2280 109 3 0 chr10 77468005 77468308 -68120980 + AluSx SINE Alu 2 305 -7 6877 18 0 0 chr10 77468369 77469103 -68120185 - L1PA3 LINE L1 -2 6153 5420 4390 23 3 0 chr10 77469107 77469670 -68119618 + L1PA3 LINE L1 4879 5442 -713 2060 134 3 0 chr10 77469696 77469988 -68119300 + AluSx SINE Alu 1 293 -19 2096 101 49 3 chr10 77470309 77470597 -68118691 + AluSx SINE Alu 1 301 -11 2154 133 0 9 chr10 77470835 77471150 -68118138 + AluSx SINE Alu 1 312 0 39515 78 9 9 chr10 77471188 77477339 -68111949 - L1PA6 LINE L1 0 6154 1 1931 148 16 0 chr10 77477341 77477644 -68111644 - AluJo SINE Alu -4 308 1 249 274 0 0 chr10 77478470 77478532 -68110756 + MIR SINE MIR 200 261 -1 2324 97 0 7 chr10 77479023 77479331 -68109957 + AluSx SINE Alu 1 306 -6 1282 107 0 18 chr10 77479331 77479500 -68109788 + AluSg/x SINE Alu 126 291 -21 2059 103 27 10 chr10 77479512 77479813 -68109475 + AluSx SINE Alu 1 306 -6 2417 163 46 10 chr10 77479898 77480309 -68108979 + MSTB LTR MaLR 1 426 0 1765 137 0 113 chr10 77480326 77480663 -68108625 + AluJb SINE Alu 4 302 0 479 304 137 15 chr10 77480737 77481000 -68108288 + L1ME LINE L1 5318 5612 -509 754 281 104 28 chr10 77481003 77481320 -68107968 + L1ME LINE L1 5443 5783 -379 1907 147 3 0 chr10 77481322 77481608 -68107680 + AluSx SINE Alu 1 287 -25 489 34 0 0 chr10 77481608 77481667 -68107621 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 1599 89 5 27 chr10 77481812 77482036 -68107252 + AluSp SINE Alu 95 313 0 2392 106 0 0 chr10 77482047 77482359 -68106929 + AluSx SINE Alu 1 312 0 2354 81 10 7 chr10 77482615 77482923 -68106365 + AluSq SINE Alu 1 309 -4 1350 202 250 15 chr10 77483835 77484231 -68105057 + MLT1F LTR MaLR 24 512 -30 1103 186 43 19 chr10 77484231 77484396 -68104892 - AluJb SINE Alu -8 304 131 477 0 0 0 chr10 77484396 77484449 -68104839 + (TG)n Simple_repeat Simple_repeat 2 54 0 1103 186 43 19 chr10 77484449 77484493 -68104795 - AluJb SINE Alu -181 131 90 360 0 0 0 chr10 77484493 77484533 -68104755 + (TG)n Simple_repeat Simple_repeat 2 41 0 798 211 0 0 chr10 77484537 77484670 -68104618 - FLAM_C SINE Alu 0 133 1 1847 145 7 26 chr10 77484762 77485066 -68104222 - AluJb SINE Alu -12 300 3 329 115 0 16 chr10 77485236 77485297 -68103991 + (GA)n Simple_repeat Simple_repeat 1 60 0 2397 88 10 0 chr10 77485433 77485739 -68103549 + AluSq SINE Alu 1 309 -4 1787 142 0 74 chr10 77486251 77486575 -68102713 - AluJb SINE Alu -12 300 1 2291 124 0 6 chr10 77486595 77486909 -68102379 + AluSx SINE Alu 1 312 0 544 326 70 55 chr10 77487157 77487740 -68101548 + L2 LINE L2 2131 2817 -497 21 0 0 0 chr10 77488306 77488327 -68100961 + AT_rich Low_complexity Low_complexity 1 21 0 218 371 26 77 chr10 77488980 77489174 -68100114 + L2 LINE L2 3047 3230 -42 652 216 114 36 chr10 77489192 77489214 -68100074 + MIR SINE MIR 12 31 -231 2147 111 3 10 chr10 77489214 77489521 -68099767 + AluSq SINE Alu 1 305 -8 652 216 114 36 chr10 77489521 77489665 -68099623 + MIR SINE MIR 31 191 -71 277 196 0 18 chr10 77489674 77489730 -68099558 + Tigger5 DNA MER2_type 1 55 -2268 924 157 0 7 chr10 77489752 77489899 -68099389 - AluJb SINE Alu -1 311 166 250 236 91 0 chr10 77489907 77489962 -68099326 + Tigger5 DNA MER2_type 2264 2323 0 310 219 31 0 chr10 77489962 77490026 -68099262 + MIR SINE MIR 197 262 0 2360 72 14 0 chr10 77490616 77490909 -68098379 - AluSp SINE Alu -16 297 1 2154 145 43 10 chr10 77491147 77491541 -68097747 + MER7C DNA MER2_type 1 407 -195 2375 122 0 0 chr10 77491560 77491872 -68097416 + AluSx SINE Alu 1 312 0 254 311 0 0 chr10 77491888 77491949 -68097339 + (CA)n Simple_repeat Simple_repeat 2 62 0 1012 128 29 73 chr10 77492061 77492265 -68097023 + MER7C DNA MER2_type 407 601 -1 1262 112 0 6 chr10 77492558 77492727 -68096561 - AluSg/x SINE Alu -23 287 120 398 318 24 21 chr10 77492918 77493078 -68096210 + MIR SINE MIR 6 163 -45 1684 164 58 34 chr10 77493081 77493460 -68095828 + MLT1B LTR MaLR 1 388 -2 595 270 109 11 chr10 77494003 77494227 -68095061 - MIR SINE MIR -12 250 15 2095 111 3 54 chr10 77495037 77495353 -68093935 + AluSq SINE Alu 1 300 -13 2089 111 0 75 chr10 77495552 77495689 -68093599 + AluSx SINE Alu 1 147 -165 1919 148 3 0 chr10 77495689 77495996 -68093292 + AluSx SINE Alu 1 308 0 2089 111 0 75 chr10 77495996 77496190 -68093098 + AluSx SINE Alu 147 308 -4 3879 170 17 21 chr10 77496738 77497358 -68091930 + MER44D DNA MER2_type 1 491 -1996 2302 116 0 10 chr10 77497358 77497668 -68091620 + AluSx SINE Alu 1 307 -5 3879 170 17 21 chr10 77497668 77497771 -68091517 + MER44D DNA MER2_type 491 593 -12 356 158 179 63 chr10 77498089 77498184 -68091104 + L2 LINE L2 3208 3313 0 182 322 34 0 chr10 77498175 77498234 -68091054 - L2 LINE L2 -76 3196 3136 * 2029 127 0 31 chr10 77498737 77499070 -68090218 - AluSx SINE Alu 0 324 1 635 258 94 46 chr10 77499087 77499479 -68089809 + HAL1 LINE L1 1111 1521 -986 325 136 0 148 chr10 77499520 77499608 -68089680 - MER33 DNA MER1_type 0 363 289 2652 116 57 7 chr10 77499608 77500066 -68089222 + L1MA5A LINE L1 5813 6293 -4 2213 86 0 17 chr10 77500090 77500380 -68088908 - AluY SINE Alu -24 287 3 1182 152 53 0 chr10 77500402 77500645 -68088643 - MER33 DNA MER1_type -68 256 1 188 324 0 56 chr10 77500916 77500987 -68088301 + MIR3 SINE MIR 101 167 -41 215 312 99 28 chr10 77501243 77501384 -68087904 - MIR SINE MIR -14 248 98 397 286 96 2 chr10 77501872 77502180 -68087108 + L1ME LINE L1 5106 5437 -727 4167 190 42 22 chr10 77502196 77503476 -68085812 + L1M1 LINE L1 3257 4565 -3000 448 312 23 50 chr10 77503487 77503717 -68085571 + L1ME LINE L1 5428 5650 -520 2381 109 3 0 chr10 77503717 77504029 -68085259 + AluSq SINE Alu 1 313 0 448 312 23 50 chr10 77504029 77504099 -68085189 + L1ME LINE L1 5650 5720 -450 1566 201 16 16 chr10 77504123 77504427 -68084861 + AluJo SINE Alu 1 304 -8 2038 185 64 110 chr10 77504783 77505545 -68083743 + LTR8A LTR ERV1 1 727 0 294 190 76 13 chr10 77505546 77505625 -68083663 + MLT1H LTR MaLR 464 547 -2 676 183 33 7 chr10 77505915 77506068 -68083220 - MER58 DNA MER1_type -158 183 27 1985 187 139 98 chr10 77506122 77506960 -68082328 - LTR28 LTR ERV1 -4 1016 1 663 130 10 0 chr10 77507137 77507237 -68082051 + FLAM_C SINE Alu 14 114 -29 188 33 0 33 chr10 77507237 77507267 -68082021 + (CAAT)n Simple_repeat Simple_repeat 4 32 0 2246 87 17 0 chr10 77507305 77507593 -68081695 + AluY SINE Alu 1 293 -18 1648 155 113 76 chr10 77507601 77507841 -68081447 + LTR2B LTR ERV1 3 233 -257 231 36 0 0 chr10 77507841 77507869 -68081419 + (TTCTG)n Simple_repeat Simple_repeat 1 28 0 1648 155 113 76 chr10 77507869 77508099 -68081189 + LTR2B LTR ERV1 233 490 0 886 165 24 0 chr10 77508992 77509156 -68080132 - MER4E LTR ERV1 0 779 612 235 262 5 80 chr10 77509570 77509757 -68079531 + C-rich Low_complexity Low_complexity 4 176 0 2266 93 0 3 chr10 77510247 77510536 -68078752 - AluSc SINE Alu -21 288 1 258 169 0 34 chr10 77510715 77510774 -68078514 + T-rich Low_complexity Low_complexity 5 61 0 4086 152 82 20 chr10 77511830 77511970 -68077318 - MER6 DNA MER2_type 0 865 735 2136 118 0 0 chr10 77511970 77512267 -68077021 + AluSx SINE Alu 1 297 -15 4086 152 82 20 chr10 77512267 77512923 -68076365 - MER6 DNA MER2_type -130 735 20 2248 99 10 16 chr10 77513127 77513439 -68075849 + AluSx SINE Alu 1 310 -2 745 174 0 0 chr10 77513692 77513807 -68075481 - FLAM_A SINE Alu -17 116 2 670 245 90 21 chr10 77514533 77514587 -68074701 - MIR SINE MIR -24 238 189 2079 126 3 3 chr10 77514587 77514881 -68074407 - AluSx SINE Alu -18 294 1 670 245 90 21 chr10 77514881 77515014 -68074274 - MIR SINE MIR -73 189 38 2391 106 0 0 chr10 77515097 77515400 -68073888 + AluSx SINE Alu 1 303 -9 1542 196 14 11 chr10 77515400 77515681 -68073607 - AluJo SINE Alu -30 282 1 189 212 0 0 chr10 77515998 77516031 -68073257 + L2 LINE L2 3224 3256 -16 2235 116 7 0 chr10 77517020 77517321 -68071967 - AluSx SINE Alu -9 303 1 814 136 0 8 chr10 77517970 77518088 -68071200 - AluSq/x SINE Alu -196 117 1 459 292 50 46 chr10 77518179 77518398 -68070890 - MIR SINE MIR -14 248 29 1847 168 10 3 chr10 77518687 77518979 -68070309 - AluJo SINE Alu -18 294 1 292 236 0 0 chr10 77519051 77519115 -68070173 + Charlie8 DNA MER1_type 1360 1415 -1002 520 320 148 35 chr10 77519132 77519760 -68069528 - L2 LINE L2 -554 2760 2062 2258 117 0 0 chr10 77520552 77520860 -68068428 - AluSx SINE Alu 0 312 5 389 349 113 18 chr10 77521618 77521893 -68067395 - L3 LINE CR1 -56 1521 1221 246 81 0 0 chr10 77521976 77522013 -68067275 + (TA)n Simple_repeat Simple_repeat 1 37 0 2345 85 10 0 chr10 77522013 77522308 -68066980 - AluSx SINE Alu -14 298 1 310 289 72 28 chr10 77523535 77523715 -68065573 + HAL1b LINE L1 316 503 -845 566 186 0 157 chr10 77523734 77523906 -68065382 + AluJb SINE Alu 137 281 -31 794 150 15 0 chr10 77524102 77524235 -68065053 + MER58B DNA MER1_type 204 338 -3 210 220 60 20 chr10 77524266 77524366 -68064922 + A-rich Low_complexity Low_complexity 2 105 0 756 148 0 0 chr10 77524385 77524530 -68064758 - FLAM_C SINE Alu 0 145 1 368 291 160 23 chr10 77524637 77524812 -68064476 - MIR SINE MIR -57 205 7 28 0 0 0 chr10 77524863 77524891 -68064397 + AT_rich Low_complexity Low_complexity 1 28 0 294 29 0 0 chr10 77525034 77525069 -68064219 + (CA)n Simple_repeat Simple_repeat 1 35 0 1982 143 4 0 chr10 77525616 77525923 -68063365 - AluSx SINE Alu 0 308 1 5212 107 33 4 chr10 77525953 77526795 -68062493 + HSMAR2 DNA Mariner 1 867 -435 270 342 74 30 chr10 77527797 77527999 -68061289 - MIR SINE MIR 0 262 52 1510 181 101 0 chr10 77528840 77529116 -68060172 - AluJb SINE Alu -8 304 1 715 151 75 224 chr10 77531456 77531843 -68057445 - L1MC4 LINE L1 -1 8041 7757 2163 101 42 0 chr10 77531843 77532130 -68057158 - AluSx SINE Alu -13 299 1 715 151 75 224 chr10 77532130 77532287 -68057001 - L1MC4 LINE L1 -285 7757 7578 711 146 8 8 chr10 77532347 77532477 -68056811 - L1MB7 LINE L1 -268 5916 5787 660 130 85 62 chr10 77532483 77532660 -68056628 - Ricksha_b DNA DNA -7 1647 1467 * 3523 121 60 53 chr10 77532653 77533299 -68055989 - Ricksha_b DNA DNA -1883 971 318 2222 105 13 3 chr10 77533299 77533605 -68055683 - AluSc SINE Alu 0 309 1 3523 121 60 53 chr10 77533605 77533660 -68055628 - Ricksha_b DNA DNA -2536 318 265 262 83 0 0 chr10 77533673 77533709 -68055579 - Ricksha_b DNA DNA -1217 37 2 410 159 248 9 chr10 77533709 77533822 -68055466 - L1MB7 LINE L1 -384 5796 5657 3551 160 31 13 chr10 77533925 77534608 -68054680 - MER4D LTR ERV1 -173 730 36 412 69 69 28 chr10 77534694 77534766 -68054522 + MER57A-int LTR ERV1 7463 7537 0 2014 143 92 5 chr10 77534766 77535136 -68054152 + MER57A LTR ERV1 1 402 -1 1780 154 0 47 chr10 77535248 77535399 -68053889 - AluJo SINE Alu -28 284 152 2420 73 0 7 chr10 77535399 77535699 -68053589 - AluY SINE Alu -13 298 1 1780 154 0 47 chr10 77535699 77535845 -68053443 - AluJo SINE Alu -160 152 1 294 260 62 31 chr10 77535929 77536025 -68053263 + L2 LINE L2 3209 3307 -6 234 91 0 0 chr10 77536025 77536058 -68053230 + (TA)n Simple_repeat Simple_repeat 2 34 0 302 263 195 8 chr10 77536065 77536183 -68053105 - L1ME4a LINE L1 -45 6076 5937 544 149 26 26 chr10 77536186 77536300 -68052988 + L1MC5 LINE L1 7356 7469 -492 357 315 56 17 chr10 77536351 77536529 -68052759 - LTR16C LTR ERVL -101 390 206 849 211 119 37 chr10 77536779 77537182 -68052106 + L1MC5 LINE L1 7478 7913 -48 2189 118 0 0 chr10 77537216 77537503 -68051785 - AluSx SINE Alu -25 287 1 1989 162 0 0 chr10 77537688 77537997 -68051291 - AluJb SINE Alu -3 309 1 2055 136 7 3 chr10 77538155 77538457 -68050831 + AluSq SINE Alu 1 303 -10 1862 152 10 6 chr10 77538491 77538979 -68050309 + MER7C DNA MER2_type 1 600 -2 772 205 30 0 chr10 77538983 77539149 -68050139 + MER82 DNA MER2_type 1 171 -482 572 237 67 9 chr10 77539149 77539373 -68049915 - L1M4 LINE L1 -3080 3066 2830 203 346 0 0 chr10 77539518 77539570 -68049718 + L2 LINE L2 3234 3285 -28 749 177 0 0 chr10 77540318 77540442 -68048846 - AluJb SINE Alu -188 124 1 2256 97 10 3 chr10 77541050 77541360 -68047928 - AluSq SINE Alu -1 312 1 2522 69 0 0 chr10 77541734 77542039 -68047249 - AluY SINE Alu -6 305 1 276 281 37 44 chr10 77542381 77542516 -68046772 + L3 LINE CR1 1099 1232 -345 1060 221 50 45 chr10 77542673 77543031 -68046257 + L1MC5 LINE L1 7086 7445 -516 2295 114 0 0 chr10 77543239 77543547 -68045741 + AluSx SINE Alu 1 308 -4 1599 146 15 11 chr10 77544847 77545114 -68044174 - AluSp SINE Alu -13 300 33 2171 109 7 3 chr10 77545350 77545653 -68043635 + AluSx SINE Alu 1 304 -8 288 362 0 11 chr10 77546153 77546247 -68043041 + MIR SINE MIR 20 112 -150 219 204 0 0 chr10 77546284 77546338 -68042950 + (CATA)n Simple_repeat Simple_repeat 3 56 0 291 202 111 50 chr10 77547351 77547450 -68041838 + AluJo SINE Alu 43 147 -155 1134 185 18 130 chr10 77547455 77547785 -68041503 + AluJo SINE Alu 18 310 -2 40 59 0 0 chr10 77547949 77548017 -68041271 + AT_rich Low_complexity Low_complexity 1 68 0 758 141 50 0 chr10 77548108 77548229 -68041059 + FLAM_C SINE Alu 1 127 -16 26 0 0 0 chr10 77548232 77548258 -68041030 + AT_rich Low_complexity Low_complexity 1 26 0 2044 139 27 9 chr10 77548311 77548642 -68040646 + MER1B DNA MER1_type 1 337 0 2194 131 0 0 chr10 77549152 77549458 -68039830 + AluSx SINE Alu 1 306 -6 233 347 25 41 chr10 77549630 77549826 -68039462 - L2 LINE L2 -1771 1543 1351 2131 125 3 0 chr10 77550094 77550389 -68038899 + AluSx SINE Alu 1 296 -16 2237 123 0 0 chr10 77550716 77551017 -68038271 - AluSx SINE Alu -11 301 1 2856 155 42 0 chr10 77551747 77552271 -68037017 + L1MB2 LINE L1 5583 6128 -43 273 132 19 0 chr10 77552469 77552522 -68036766 + L1MB4 LINE L1 6126 6179 -1 25 51 0 0 chr10 77552552 77552591 -68036697 + AT_rich Low_complexity Low_complexity 1 39 0 21 36 0 0 chr10 77552624 77552652 -68036636 + AT_rich Low_complexity Low_complexity 1 28 0 635 337 73 26 chr10 77552673 77552822 -68036466 + L1MEc LINE L1 32 173 -6223 2253 123 7 0 chr10 77552822 77553132 -68036156 + AluSx SINE Alu 1 312 0 635 337 73 26 chr10 77553132 77553560 -68035728 + L1MEc LINE L1 173 636 -5760 1701 119 48 122 chr10 77553562 77553707 -68035581 + AluSx SINE Alu 1 155 -157 4302 31 0 0 chr10 77553707 77554216 -68035072 + L1PA4 LINE L1 5647 6155 0 1701 119 48 122 chr10 77554216 77554405 -68034883 + AluSx SINE Alu 155 310 -2 2052 132 13 13 chr10 77554598 77554909 -68034379 - AluSx SINE Alu -1 311 1 180 0 0 0 chr10 77555402 77555422 -68033866 + (ATG)n Simple_repeat Simple_repeat 2 21 0 383 203 0 93 chr10 77555425 77555543 -68033745 - MIR SINE MIR -7 255 149 631 208 96 109 chr10 77555551 77555631 -68033657 - LTR41 LTR ERVL -1 772 692 1374 196 105 18 chr10 77555631 77555917 -68033371 + AluJo SINE Alu 1 311 -1 631 208 96 109 chr10 77555917 77556148 -68033140 - LTR41 LTR ERVL -81 692 465 380 228 177 6 chr10 77556355 77556513 -68032775 - LTR41 LTR ERVL -587 186 2 283 286 0 14 chr10 77556536 77556606 -68032682 - MIR SINE MIR -160 102 34 308 207 33 50 chr10 77557157 77557278 -68032010 + MLT1H LTR MaLR 431 549 0 2444 87 0 3 chr10 77557308 77557617 -68031671 - AluSx SINE Alu -4 308 1 318 50 0 0 chr10 77557760 77557800 -68031488 + (TA)n Simple_repeat Simple_repeat 2 41 0 2218 138 0 0 chr10 77557800 77558098 -68031190 - AluSx SINE Alu -14 298 1 2151 119 3 0 chr10 77558523 77558808 -68030480 - AluSx SINE Alu -26 286 1 2084 131 0 0 chr10 77559649 77559932 -68029356 + AluSx SINE Alu 5 287 -25 180 315 35 107 chr10 77560088 77560285 -68029003 - L2 LINE L2 -551 2763 2581 622 195 76 8 chr10 77560344 77560462 -68028826 + FLAM_A SINE Alu 1 126 -7 303 383 25 31 chr10 77560601 77560763 -68028525 + MIR3 SINE MIR 25 185 -23 181 365 94 0 chr10 77560934 77561019 -68028269 - MIR SINE MIR -82 126 34 36 23 0 0 chr10 77561154 77561197 -68028091 + AT_rich Low_complexity Low_complexity 1 43 0 1349 238 71 55 chr10 77561200 77561751 -68027537 + L1MC4a LINE L1 5303 5867 -1941 825 157 0 8 chr10 77561751 77561885 -68027403 + FLAM_C SINE Alu 1 133 0 1349 238 71 55 chr10 77561885 77561967 -68027321 + L1MC4a LINE L1 5867 5946 -1862 33 0 0 0 chr10 77562218 77562251 -68027037 + AT_rich Low_complexity Low_complexity 1 33 0 2187 110 36 3 chr10 77562811 77563112 -68026176 + AluSq SINE Alu 1 311 -2 647 210 8 8 chr10 77563639 77563763 -68025525 - FLAM_C SINE Alu -19 124 1 301 206 67 127 chr10 77563933 77564001 -68025287 - HAL1b LINE L1 -7 1341 1270 8938 153 80 80 chr10 77564001 77564496 -68024792 + Tigger1 DNA MER2_type 2 495 -1923 2502 82 0 13 chr10 77564496 77564813 -68024475 + AluSq SINE Alu 1 313 0 8938 153 80 80 chr10 77564813 77565794 -68023494 + Tigger1 DNA MER2_type 495 1474 -944 2407 91 3 0 chr10 77565794 77566091 -68023197 + AluSp SINE Alu 3 300 -13 8938 153 80 80 chr10 77566091 77566830 -68022458 + Tigger1 DNA MER2_type 1474 2211 -207 1994 137 0 23 chr10 77566830 77567129 -68022159 - AluSx SINE Alu -20 292 1 8938 153 80 80 chr10 77567129 77567162 -68022126 + Tigger1 DNA MER2_type 2211 2242 -176 2227 117 3 0 chr10 77567162 77567469 -68021819 - AluSg SINE Alu -2 308 1 8938 153 80 80 chr10 77567469 77567631 -68021657 + Tigger1 DNA MER2_type 2242 2417 -1 301 206 67 127 chr10 77567631 77567727 -68021561 - HAL1b LINE L1 -78 1270 1187 1084 212 34 0 chr10 77567738 77567974 -68021314 - MLT1A1 LTR MaLR 0 365 122 495 202 71 0 chr10 77568039 77568138 -68021150 + Tigger4(Zombi) DNA MER2_type 1 106 -2625 * 2283 118 25 32 chr10 77568132 77568566 -68020722 + Tigger4(Zombi) DNA MER2_type 2301 2731 0 2173 113 0 0 chr10 77569014 77569342 -68019946 - AluSx SINE Alu 0 328 1 1991 124 7 0 chr10 77569913 77570186 -68019102 + AluSx SINE Alu 1 275 -37 2138 127 3 3 chr10 77570486 77570794 -68018494 - AluSq SINE Alu -5 308 1 211 328 143 42 chr10 77570879 77570998 -68018290 - L2 LINE L2 -5 3267 3137 1457 178 0 128 chr10 77571023 77571366 -68017922 + AluJb SINE Alu 1 299 -13 1773 161 56 7 chr10 77571369 77571673 -68017615 + 7SLRNA srpRNA srpRNA 2 320 0 2160 115 10 0 chr10 77571848 77572143 -68017145 - AluSx SINE Alu -14 298 1 1741 143 40 0 chr10 77573124 77573397 -68015891 - AluJb SINE Alu -18 294 11 1314 112 5 0 chr10 77573648 77573836 -68015452 - AluSg/x SINE Alu -7 303 115 1746 68 0 0 chr10 77573978 77574184 -68015104 + AluSx SINE Alu 1 206 -106 414 56 0 0 chr10 77574186 77574240 -68015048 + AluSx SINE Alu 244 297 -14 1110 190 101 57 chr10 77574320 77574579 -68014709 + MER2 DNA MER2_type 2 279 -66 1915 162 10 0 chr10 77574579 77574876 -68014412 - AluJo SINE Alu -11 301 2 1110 190 101 57 chr10 77574876 77574932 -68014356 + MER2 DNA MER2_type 279 331 -14 2325 95 0 3 chr10 77574934 77575230 -68014058 + AluSx SINE Alu 1 295 -17 1538 196 33 4 chr10 77575776 77576051 -68013237 + AluJo SINE Alu 21 303 -9 1824 146 0 48 chr10 77576053 77576347 -68012941 + AluSx SINE Alu 1 280 -32 308 24 0 24 chr10 77576347 77576389 -68012899 + (TAAA)n Simple_repeat Simple_repeat 4 44 0 355 240 49 60 chr10 77576402 77576545 -68012743 + MER34B LTR ERV1 366 508 -57 2175 112 128 16 chr10 77576545 77576928 -68012360 + MSTA LTR MaLR 1 426 -2 355 240 49 60 chr10 77576928 77576967 -68012321 + MER34B LTR ERV1 508 546 -19 403 305 35 25 chr10 77577007 77577210 -68012078 + L1M4 LINE L1 4019 4223 -1923 1010 199 10 5 chr10 77577229 77577435 -68011853 - MER20 DNA MER1_type -4 215 9 308 310 24 75 chr10 77577441 77577571 -68011717 + L1M4 LINE L1 4239 4355 -1791 2341 87 0 3 chr10 77577571 77577870 -68011418 + AluSx SINE Alu 1 298 -14 308 310 24 75 chr10 77577870 77577952 -68011336 + L1M4 LINE L1 4355 4440 -1706 499 253 69 87 chr10 77578032 77578309 -68010979 + L1M4 LINE L1 4573 4844 -1302 612 121 23 15 chr10 77578354 77578486 -68010802 + L1M4 LINE L1 1887 2019 -4365 351 213 85 0 chr10 77578498 77578592 -68010696 + FAM SINE Alu 74 175 0 3824 241 27 15 chr10 77578602 77579094 -68010194 + L1M4 LINE L1 2353 2838 -3544 2320 77 0 19 chr10 77579094 77579427 -68009861 + AluSg SINE Alu 1 310 0 3824 241 27 15 chr10 77579427 77580239 -68009049 + L1M4 LINE L1 2838 3673 -2709 1602 155 49 0 chr10 77580306 77580571 -68008717 + AluSx SINE Alu 1 278 -34 418 109 0 0 chr10 77580572 77580636 -68008652 - Alu SINE Alu -9 303 240 34 42 0 0 chr10 77680781 77680829 -67908459 + AT_rich Low_complexity Low_complexity 1 48 0 282 29 0 0 chr10 77680845 77680880 -67908408 + (G)n Simple_repeat Simple_repeat 1 35 0 278 142 126 126 chr10 77680969 77681096 -67908192 + AluSg/x SINE Alu 203 300 0 316 207 27 27 chr10 77681263 77681374 -67907914 + (CATATA)n Simple_repeat Simple_repeat 5 115 0 266 331 110 7 chr10 77681404 77681558 -67907730 - MIR SINE MIR -6 256 87 458 111 69 0 chr10 77681564 77681636 -67907652 + AluSp/q SINE Alu 204 280 -33 1016 58 52 19 chr10 77681637 77681792 -67907496 + AluY SINE Alu 1 160 -151 1176 131 30 5 chr10 77681893 77682092 -67907196 + L1MB7 LINE L1 5962 6165 -19 1547 179 54 67 chr10 77682094 77682494 -67906794 + L1M4 LINE L1 4552 4947 -1435 2304 61 3 14 chr10 77682494 77682789 -67906499 + AluSp SINE Alu 1 292 -21 1547 179 54 67 chr10 77682789 77682853 -67906435 + L1M4 LINE L1 4947 5010 -1372 2056 87 52 10 chr10 77682853 77683142 -67906146 + AluSx SINE Alu 2 302 -10 240 234 16 47 chr10 77683142 77683206 -67906082 - L1ME LINE L1 -311 5810 5749 365 148 284 0 chr10 77683441 77683522 -67905766 - AluSg/x SINE Alu -2 298 195 1171 68 12 6 chr10 77683640 77683803 -67905485 + AluY SINE Alu 145 308 -3 296 333 134 12 chr10 77683805 77683976 -67905312 - L2 LINE L2 -428 2886 2695 727 133 9 0 chr10 77684238 77684343 -67904945 + MLT1D LTR MaLR 1 106 -399 1721 185 0 13 chr10 77684387 77684690 -67904598 + AluJb SINE Alu 1 299 -13 1441 113 10 0 chr10 77684763 77684958 -67904330 + AluSx SINE Alu 1 197 -115 185 311 57 38 chr10 77685023 77685129 -67904159 + MIR SINE MIR 56 163 -99 343 185 0 0 chr10 77685495 77685560 -67903728 - AluS SINE Alu -5 295 231 1097 156 54 65 chr10 77685867 77686143 -67903145 + AluJb SINE Alu 22 294 -18 405 285 0 69 chr10 77686150 77686193 -67903095 - MIR SINE MIR -124 138 94 2277 105 0 0 chr10 77686193 77686487 -67902801 + AluSg SINE Alu 6 299 -11 405 285 0 69 chr10 77686487 77686587 -67902701 - MIR SINE MIR -168 94 5 599 195 16 8 chr10 77686658 77686781 -67902507 + L1MB8 LINE L1 4503 4626 -1520 * 3550 173 50 15 chr10 77686775 77687625 -67901663 + L1MB8 LINE L1 5110 5995 -183 412 215 52 59 chr10 77687648 77687783 -67901505 + L1MB7 LINE L1 5910 6043 -141 1004 86 0 33 chr10 77687811 77687962 -67901326 + AluSg SINE Alu 1 146 -164 203 229 0 0 chr10 77688411 77688446 -67900842 + (TG)n Simple_repeat Simple_repeat 2 36 0 2405 68 0 3 chr10 77688447 77688741 -67900547 - AluY SINE Alu -18 293 1 300 283 17 33 chr10 77688784 77688904 -67900384 + L1ME4a LINE L1 5959 6076 -45 2011 93 10 30 chr10 77688929 77689231 -67900057 - AluSq SINE Alu -17 296 1 2375 88 3 3 chr10 77689453 77689758 -67899530 + AluSq SINE Alu 1 305 -8 4593 149 58 38 chr10 77689917 77691183 -67898105 + L1MB1 LINE L1 4881 6172 -17 1277 148 45 49 chr10 77691308 77691551 -67897737 + AluJo SINE Alu 65 306 -6 504 265 85 40 chr10 77691553 77691753 -67897535 - L1MEd LINE L1 -5564 555 347 465 228 89 8 chr10 77691915 77692038 -67897250 - L2 LINE L2 -1 3312 3180 1724 181 14 3 chr10 77692079 77692372 -67896916 + AluJo SINE Alu 1 296 -16 2874 134 71 54 chr10 77692388 77692940 -67896348 - MER21A LTR ERV1 -358 573 13 201 74 0 0 chr10 77692954 77692981 -67896307 + (CA)n Simple_repeat Simple_repeat 2 28 0 24 85 0 0 chr10 77692987 77693046 -67896242 + AT_rich Low_complexity Low_complexity 1 59 0 211 250 75 50 chr10 77693321 77693401 -67895887 + MIR SINE MIR 34 115 -93 260 244 176 17 chr10 77693891 77694010 -67895278 - L2 LINE L2 -7 3306 3169 383 297 54 7 chr10 77694155 77694303 -67894985 + L1ME LINE L1 5524 5678 -443 2393 93 3 0 chr10 77694363 77694673 -67894615 + AluSp SINE Alu 1 311 -2 877 149 97 6 chr10 77694756 77694931 -67894357 + L1MA9 LINE L1 5995 6185 -127 2359 82 3 10 chr10 77695106 77695412 -67893876 - AluSp SINE Alu -9 304 1 580 16 0 0 chr10 77696025 77696126 -67893162 + AluY SINE Alu 218 318 0 2184 78 0 7 chr10 77696203 77696485 -67892803 + AluY SINE Alu 1 280 -31 22 0 0 0 chr10 77696626 77696648 -67892640 + AT_rich Low_complexity Low_complexity 1 22 0 696 101 10 0 chr10 77697502 77697601 -67891687 - LTR12 LTR ERV1 0 714 615 365 220 11 0 chr10 77697603 77697694 -67891594 - LTR30 LTR ERV1 -79 643 552 2466 173 173 20 chr10 77697694 77698288 -67891000 - pTR5 LTR ERV1 -402 2036 1352 2004 125 14 14 chr10 77698365 77698660 -67890628 - AluSx SINE Alu -17 295 1 1213 239 121 10 chr10 77698671 77699076 -67890212 - L2 LINE L2 -1 3312 2863 2119 119 20 0 chr10 77699085 77699379 -67889909 + AluSx SINE Alu 1 300 -12 188 202 56 79 chr10 77699533 77699622 -67889666 - MIR SINE MIR 0 262 176 792 91 9 9 chr10 77700000 77700110 -67889178 - Tigger2 DNA MER2_type -2608 110 1 2279 177 52 19 chr10 77700128 77700592 -67888696 - L1MD2 LINE L1 -461 5898 5420 778 133 255 0 chr10 77700592 77700780 -67888508 - MER33 DNA MER1_type -88 236 1 267 54 0 0 chr10 77701237 77701274 -67888014 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 1370 185 4 43 chr10 77701296 77701572 -67887716 + AluJb SINE Alu 27 291 -21 1933 167 0 7 chr10 77701582 77701887 -67887401 + AluJb SINE Alu 1 303 -9 234 0 0 0 chr10 77701890 77701916 -67887372 + (TA)n Simple_repeat Simple_repeat 1 26 0 21 36 0 0 chr10 77702658 77702686 -67886602 + AT_rich Low_complexity Low_complexity 1 28 0 867 127 85 67 chr10 77703466 77703631 -67885657 + FAM SINE Alu 1 168 -7 1979 89 19 0 chr10 77703642 77703899 -67885389 + AluSq SINE Alu 34 295 -18 382 193 64 93 chr10 77703910 77704050 -67885238 + MER5A DNA MER1_type 53 188 -1 2494 69 3 0 chr10 77704368 77704671 -67884617 + AluSp SINE Alu 1 304 -9 1842 156 9 34 chr10 77704686 77705006 -67884282 + AluJo SINE Alu 1 312 0 359 306 104 0 chr10 77705511 77705645 -67883643 + MIR3 SINE MIR 60 207 -1 991 151 17 17 chr10 77705762 77705934 -67883354 + AluJo SINE Alu 54 225 -87 298 328 135 31 chr10 77706510 77706836 -67882452 - L2 LINE L2 -1124 2190 1831 1945 151 0 13 chr10 77706934 77707238 -67882050 - AluJb SINE Alu -12 300 1 243 0 0 0 chr10 77707238 77707265 -67882023 + (T)n Simple_repeat Simple_repeat 1 27 0 749 100 0 10 chr10 77707265 77707365 -67881923 - HY3 scRNA scRNA -2 99 1 2717 127 67 20 chr10 77708842 77709244 -67880044 - MSTC LTR MaLR -4 424 4 1883 116 101 0 chr10 77709423 77709700 -67879588 - AluSg SINE Alu -3 307 3 2398 94 0 22 chr10 77709704 77710023 -67879265 - AluSx SINE Alu 0 312 1 21 71 0 0 chr10 77710136 77710178 -67879110 + AT_rich Low_complexity Low_complexity 1 42 0 24 0 0 0 chr10 77710455 77710479 -67878809 + AT_rich Low_complexity Low_complexity 1 24 0 331 256 92 46 chr10 77711031 77711226 -67878062 - L1MC5 LINE L1 -1002 6959 6756 918 120 0 23 chr10 77711364 77711497 -67877791 - FRAM SINE Alu -18 158 29 298 329 145 13 chr10 77711644 77711878 -67877410 + L2 LINE L2 2646 2910 -404 220 271 0 0 chr10 77711971 77712019 -67877269 + L2 LINE L2 3242 3289 -24 2083 142 3 0 chr10 77712031 77712342 -67876946 - AluJb SINE Alu 0 312 1 2319 92 10 0 chr10 77712527 77712821 -67876467 + AluSx SINE Alu 1 297 -15 2514 206 25 32 chr10 77713065 77713562 -67875726 + L1 LINE L1 4807 5301 -845 2215 114 0 0 chr10 77713562 77713851 -67875437 + AluSq SINE Alu 1 289 -24 2514 206 25 32 chr10 77713851 77713946 -67875342 + L1 LINE L1 5301 5395 -751 2438 56 0 0 chr10 77714233 77714559 -67874729 - AluY SINE Alu 0 311 1 441 0 0 0 chr10 77714597 77714646 -67874642 + (TG)n Simple_repeat Simple_repeat 2 50 0 2043 101 3 32 chr10 77714835 77715143 -67874145 - AluSq SINE Alu -14 299 1 252 0 0 0 chr10 77715160 77715188 -67874100 + (TA)n Simple_repeat Simple_repeat 2 29 0 2200 112 0 0 chr10 77715188 77715483 -67873805 - AluSc SINE Alu -14 295 1 1853 131 0 64 chr10 77715483 77715795 -67873493 - AluSx SINE Alu -9 303 12 2106 115 38 0 chr10 77715881 77716168 -67873120 - AluSx SINE Alu -14 298 1 212 222 111 0 chr10 77716234 77716297 -67872991 + L2 LINE L2 3244 3313 0 277 225 54 62 chr10 77716324 77716453 -67872835 + L2 LINE L2 3182 3309 -4 485 189 183 74 chr10 77716517 77716593 -67872695 - MER69 DNA AcHobo -416 2110 2044 1268 196 60 28 chr10 77716593 77716878 -67872410 - AluJb SINE Alu -18 294 1 485 189 183 74 chr10 77716878 77716976 -67872312 - MER69 DNA AcHobo -482 2044 1917 1464 160 34 34 chr10 77717011 77717304 -67871984 + AluJo SINE Alu 1 293 -19 2745 227 63 5 chr10 77717312 77717903 -67871385 - MER69 DNA AcHobo -1899 627 3 2147 117 0 7 chr10 77718004 77718302 -67870986 - AluSc SINE Alu -13 296 1 2077 121 87 65 chr10 77718302 77718479 -67870809 - Charlie1b DNA MER1_type -2253 508 336 904 120 16 0 chr10 77718479 77718604 -67870684 - FLAM_C SINE Alu -6 127 1 2077 121 87 65 chr10 77718604 77718872 -67870416 - Charlie1b DNA MER1_type -2425 336 53 727 299 56 9 chr10 77719253 77719484 -67869804 - MIR SINE MIR -8 254 13 21 0 0 0 chr10 77721350 77721371 -67867917 + AT_rich Low_complexity Low_complexity 1 21 0 243 0 0 0 chr10 77721636 77721663 -67867625 + (T)n Simple_repeat Simple_repeat 1 27 0 21 36 0 0 chr10 77722920 77722948 -67866340 + AT_rich Low_complexity Low_complexity 1 28 0 195 42 0 0 chr10 77722961 77722985 -67866303 + (TG)n Simple_repeat Simple_repeat 2 25 0 * 315 0 0 0 chr10 77722984 77723019 -67866269 + (TA)n Simple_repeat Simple_repeat 1 35 0 2527 70 0 13 chr10 77723021 77723336 -67865952 - AluY SINE Alu 0 311 1 1884 154 7 10 chr10 77723756 77724055 -67865233 - AluJo SINE Alu -14 298 1 30 0 0 0 chr10 77724171 77724201 -67865087 + AT_rich Low_complexity Low_complexity 1 30 0 253 108 0 0 chr10 77724201 77724238 -67865050 - FLAM_A SINE Alu -4 129 93 1719 148 10 37 chr10 77724238 77724535 -67864753 + AluJo SINE Alu 3 291 -21 2072 121 7 16 chr10 77724990 77725297 -67863991 - AluSx SINE Alu -8 304 1 27 0 0 0 chr10 77725980 77726007 -67863281 + AT_rich Low_complexity Low_complexity 1 27 0 776 156 8 23 chr10 77726111 77726239 -67863049 + AluSq/x SINE Alu 2 127 -185 22 56 0 0 chr10 77726245 77726281 -67863007 + AT_rich Low_complexity Low_complexity 1 36 0 1863 142 17 13 chr10 77726881 77727183 -67862105 - AluSx SINE Alu -5 307 5 24 0 0 0 chr10 77727497 77727521 -67861767 + AT_rich Low_complexity Low_complexity 1 24 0 278 49 0 24 chr10 77727521 77727562 -67861726 + (TG)n Simple_repeat Simple_repeat 1 40 0 584 107 0 12 chr10 77727567 77727651 -67861637 - AluS SINE Alu -229 84 2 865 156 0 0 chr10 77727741 77727863 -67861425 + FLAM_A SINE Alu 1 122 -11 518 150 17 58 chr10 77727878 77727998 -67861290 + L1MB8 LINE L1 6058 6172 -6 780 197 0 8 chr10 77728015 77728142 -67861146 - FLAM_A SINE Alu -5 128 3 1850 178 0 25 chr10 77729482 77729797 -67859491 + AluJo SINE Alu 3 309 -3 250 250 192 8 chr10 77730334 77730385 -67858903 + L1ME4a LINE L1 5979 6019 -102 2548 81 0 0 chr10 77730385 77730695 -67858593 - AluSx SINE Alu -2 310 1 250 250 192 8 chr10 77730695 77730763 -67858525 + L1ME4a LINE L1 6019 6120 -1 1428 179 43 8 chr10 77730959 77731216 -67858072 + AluJb SINE Alu 3 268 -44 2272 93 0 7 chr10 77731243 77731564 -67857724 + AluSq SINE Alu 1 313 0 376 325 102 15 chr10 77731742 77732016 -67857272 + MLT1K LTR MaLR 291 588 0 355 172 98 21 chr10 77732080 77732204 -67857084 - MER5A DNA MER1_type 0 189 1 2277 98 0 16 chr10 77732424 77732731 -67856557 + AluSx SINE Alu 1 302 -10 1967 125 99 35 chr10 77733442 77733536 -67855752 + MER47A DNA MER2_type 1 88 -2235 1881 122 61 0 chr10 77733536 77733814 -67855474 + AluSg SINE Alu 1 295 -15 1967 125 99 35 chr10 77733814 77734062 -67855226 + MER47A DNA MER2_type 88 365 -1 740 121 0 0 chr10 77734280 77734379 -67854909 - HY3 scRNA scRNA -2 99 1 21 36 0 0 chr10 77735609 77735637 -67853651 + AT_rich Low_complexity Low_complexity 1 28 0 1518 149 0 71 chr10 77736100 77736395 -67852893 - AluJo SINE Alu -36 276 3 1775 151 0 36 chr10 77736634 77736938 -67852350 + AluJb SINE Alu 1 293 -19 2849 168 108 24 chr10 77736979 77737173 -67852115 + L1MB8 LINE L1 5078 5254 -930 2433 78 3 0 chr10 77737173 77737469 -67851819 - AluSp SINE Alu -16 297 1 2849 168 108 24 chr10 77737469 77737633 -67851655 + L1MB8 LINE L1 5254 5403 -781 992 228 0 6 chr10 77737633 77737804 -67851484 + FAM SINE Alu 1 170 -5 2849 168 108 24 chr10 77737804 77738194 -67851094 + L1MB8 LINE L1 5403 5881 -303 1166 159 40 13 chr10 77738195 77738422 -67850866 + L1MB8 LINE L1 5946 6178 0 2446 91 0 3 chr10 77738437 77738746 -67850542 + AluSx SINE Alu 1 308 -4 716 202 0 0 chr10 77738756 77738885 -67850403 - L1ME LINE L1 -497 5669 5541 535 302 69 14 chr10 77739062 77739337 -67849951 + L1M4 LINE L1 4804 5093 -1053 822 184 138 0 chr10 77739339 77739491 -67849797 + AluSg/x SINE Alu 128 300 -12 3899 250 44 15 chr10 77740340 77741456 -67847832 - L1M2c LINE L1 -5411 1378 354 2023 196 50 24 chr10 77741584 77742739 -67846549 - L1M4 LINE L1 -3515 3333 2064 25 51 0 0 chr10 77742739 77742778 -67846510 + AT_rich Low_complexity Low_complexity 1 39 0 347 144 10 125 chr10 77742837 77742868 -67846420 - L1M4 LINE L1 -4786 2064 2031 2080 131 0 0 chr10 77742868 77743184 -67846104 + AluSx SINE Alu 1 316 0 347 144 10 125 chr10 77743184 77743255 -67846033 - L1M4 LINE L1 -4819 2031 1973 754 191 0 0 chr10 77743355 77743491 -67845797 - MER45 DNA AcHobo -853 187 52 209 204 0 61 chr10 77743518 77743567 -67845721 - MIR SINE MIR -142 66 21 2034 149 10 0 chr10 77743612 77743907 -67845381 + AluSx SINE Alu 1 298 -14 353 231 116 88 chr10 77744053 77744304 -67844984 - L1M4 LINE L1 -5546 1303 1046 252 59 0 0 chr10 77744324 77744358 -67844930 + (GGGA)n Simple_repeat Simple_repeat 3 36 0 351 0 0 0 chr10 77744762 77744801 -67844487 + (CA)n Simple_repeat Simple_repeat 2 40 0 1441 109 0 19 chr10 77744882 77745093 -67844195 - AluSp SINE Alu -9 304 98 461 250 24 43 chr10 77745357 77745565 -67843723 - L1MC5 LINE L1 -57 7904 7701 1449 178 0 0 chr10 77745574 77745804 -67843484 - AluJo SINE Alu -19 293 64 1053 173 0 17 chr10 77745817 77745996 -67843292 - AluJo SINE Alu -11 301 126 358 233 137 46 chr10 77746110 77746372 -67842916 - L1MC5 LINE L1 -416 7545 7260 881 214 44 39 chr10 77746483 77746851 -67842437 - L1MC4 LINE L1 -728 7233 6876 626 309 22 11 chr10 77747153 77747334 -67841954 - MER5A DNA MER1_type -5 184 2 682 141 107 0 chr10 77748353 77748502 -67840786 - AluSg/x SINE Alu -12 297 133 2179 122 0 6 chr10 77748643 77748955 -67840333 - AluSx SINE Alu -2 310 1 994 226 75 35 chr10 77748955 77749353 -67839935 - L1M4 LINE L1 -2394 4454 4041 882 150 0 7 chr10 77749355 77749495 -67839793 + FLAM_C SINE Alu 3 141 -2 459 261 25 0 chr10 77749507 77749668 -67839620 - L1M4 LINE L1 -2786 4062 3898 612 161 0 0 chr10 77749669 77749762 -67839526 + FLAM_A SINE Alu 22 114 -28 298 280 70 21 chr10 77749881 77750024 -67839264 - L1MC4 LINE L1 -1888 5920 5771 1393 220 5 48 chr10 77750034 77750407 -67838881 - LTR47B LTR ERVL -86 357 1 376 176 0 118 chr10 77750407 77750543 -67838745 - MER4B-int LTR ERV1 -2538 4220 1191 2034 118 26 3 chr10 77750544 77750849 -67838439 - AluSx SINE Alu 0 312 1 313 252 58 58 chr10 77750985 77751146 -67838142 - L1MEd LINE L1 -4868 1251 1088 2350 91 0 7 chr10 77751146 77751454 -67837834 - AluY SINE Alu -5 306 1 313 252 58 58 chr10 77751454 77751518 -67837770 - L1MEd LINE L1 -5030 1089 1026 304 256 19 51 chr10 77751655 77751811 -67837477 + CT-rich Low_complexity Low_complexity 5 155 0 189 74 0 0 chr10 77751992 77752019 -67837269 + (TTTTA)n Simple_repeat Simple_repeat 3 29 0 2007 132 4 0 chr10 77752021 77752302 -67836986 - AluJb SINE Alu -30 282 1 423 0 0 0 chr10 77752703 77752750 -67836538 + (TA)n Simple_repeat Simple_repeat 1 47 0 2041 147 0 3 chr10 77753578 77753870 -67835418 + AluJb SINE Alu 1 291 -21 1015 243 14 9 chr10 77755113 77755335 -67833953 + MER58A DNA MER1_type 2 224 0 189 0 0 0 chr10 77756686 77756707 -67832581 + (A)n Simple_repeat Simple_repeat 1 21 0 1788 186 0 7 chr10 77756904 77757211 -67832077 + AluJb SINE Alu 1 305 -7 189 0 0 0 chr10 77757398 77757419 -67831869 + (TTTTTG)n Simple_repeat Simple_repeat 4 24 0 3724 195 54 24 chr10 77757570 77759315 -67829973 - L1M4 LINE L1 -3202 3646 1850 1681 168 3 39 chr10 77760898 77761208 -67828080 - AluJo SINE Alu -13 299 1 604 213 0 16 chr10 77761474 77761596 -67827692 + 7SLRNA srpRNA srpRNA 194 313 -7 1994 123 4 0 chr10 77761666 77761943 -67827345 + AluSx SINE Alu 17 294 -18 843 173 99 0 chr10 77762061 77762223 -67827065 + AluSc SINE Alu 117 294 -15 2215 97 7 26 chr10 77762307 77762617 -67826671 + AluSx SINE Alu 1 304 -8 21 0 0 0 chr10 77763082 77763103 -67826185 + AT_rich Low_complexity Low_complexity 1 21 0 848 146 126 10 chr10 77763178 77763377 -67825911 + Tigger6 DNA MER2_type 1376 1597 0 1867 163 11 0 chr10 77764032 77764382 -67824906 + L1ME3A LINE L1 5478 5831 -353 1272 176 14 5 chr10 77764382 77764604 -67824684 + AluJb SINE Alu 1 224 -88 287 137 233 29 chr10 77764990 77765139 -67824149 + AluJb SINE Alu 156 301 -1 530 202 85 31 chr10 77765632 77765761 -67823527 + L2 LINE L2 3175 3310 -3 240 274 174 5 chr10 77766212 77766402 -67822886 + HAL1 LINE L1 2012 2233 -274 402 131 40 6 chr10 77766469 77766555 -67822733 + L1MC/D LINE L1 5356 5440 -725 212 330 11 11 chr10 77766834 77766922 -67822366 + GA-rich Low_complexity Low_complexity 1 88 0 2216 112 0 7 chr10 77767054 77767359 -67821929 - AluSx SINE Alu -9 303 1 1226 253 83 29 chr10 77767396 77767888 -67821400 + MLT1G1 LTR MaLR 1 525 -24 26 30 0 0 chr10 77767929 77767962 -67821326 + AT_rich Low_complexity Low_complexity 1 33 0 415 175 127 16 chr10 77767997 77768123 -67821165 + L1ME3A LINE L1 6023 6162 -8 1453 148 46 13 chr10 77768517 77768820 -67820468 + L1MB4 LINE L1 5868 6180 0 1648 177 28 14 chr10 77768864 77769152 -67820136 - AluJo SINE Alu -16 296 5 1111 199 31 10 chr10 77769158 77769449 -67819839 - L1M4 LINE L1 -947 5199 4903 209 316 158 46 chr10 77770362 77770514 -67818774 - L2 LINE L2 -207 3065 2897 496 291 116 29 chr10 77770569 77770810 -67818478 - L2 LINE L2 -1232 2082 1821 367 310 138 37 chr10 77770916 77771242 -67818046 - L2 LINE L2 -1988 1326 968 290 143 0 0 chr10 77771288 77771337 -67817951 - L1MB7 LINE L1 -19 6165 6117 2302 87 10 0 chr10 77771515 77771813 -67817475 + AluSx SINE Alu 1 301 -11 1857 165 0 29 chr10 77772120 77772435 -67816853 + AluJo SINE Alu 1 306 -6 2129 92 20 20 chr10 77772683 77772989 -67816299 + AluY SINE Alu 1 306 -5 1618 167 49 24 chr10 77772992 77773279 -67816009 - AluJo SINE Alu -18 294 1 2820 10 0 6 chr10 77773364 77773677 -67815611 + AluYa5 SINE Alu 1 311 0 1424 116 55 0 chr10 77774012 77774211 -67815077 - AluSp SINE Alu -103 210 1 1267 120 41 29 chr10 77774311 77774553 -67814735 - L1MB7 LINE L1 -10 6410 6166 2085 151 23 3 chr10 77774553 77774937 -67814351 - L1MB7 LINE L1 -473 5947 5556 1187 213 8 35 chr10 77774949 77775203 -67814085 + AluJo SINE Alu 1 247 -65 2149 109 3 14 chr10 77775219 77775513 -67813775 - AluSx SINE Alu -21 291 1 415 169 169 8 chr10 77775517 77775641 -67813647 - L1MB7 LINE L1 -905 5477 5334 214 222 0 0 chr10 77775798 77775843 -67813445 - MIR SINE MIR 0 262 218 324 213 147 40 chr10 77776020 77776125 -67813163 - L1MB7 LINE L1 -3940 2444 2352 1526 188 54 0 chr10 77776125 77776402 -67812886 - AluJb SINE Alu -19 293 2 324 213 147 40 chr10 77776402 77776569 -67812719 - L1MB7 LINE L1 -4032 2352 2143 * 756 192 154 46 chr10 77776568 77776938 -67812350 - L1MB7 LINE L1 -4780 1523 781 1605 160 97 9 chr10 77778026 77778345 -67810943 + MER7A DNA MER2_type 1 345 -1 1925 165 3 3 chr10 77778940 77779243 -67810045 - AluJo SINE Alu -9 303 1 2193 118 0 3 chr10 77779511 77779808 -67809480 - AluSx SINE Alu -16 296 1 325 218 81 0 chr10 77779945 77780032 -67809256 - L1M4 LINE L1 -2982 3164 3071 1152 202 35 7 chr10 77780033 77780320 -67808968 - L1MB8 LINE L1 -6 6172 5878 301 245 61 0 chr10 77780360 77780458 -67808830 - L1M4 LINE L1 -3059 3087 2984 348 309 59 48 chr10 77780634 77780876 -67808412 - HAL1b LINE L1 -715 633 382 2191 114 7 3 chr10 77780876 77781174 -67808114 - AluSx SINE Alu -13 299 1 348 309 59 48 chr10 77781174 77781387 -67807901 - HAL1b LINE L1 -966 382 173 1169 139 35 78 chr10 77781411 77781641 -67807647 - AluJb SINE Alu -7 305 86 954 170 11 0 chr10 77781722 77781904 -67807384 - L1MB8 LINE L1 -407 5776 5593 3681 180 72 7 chr10 77782042 77782892 -67806396 - L1MB3 LINE L1 -6 6177 5273 723 163 137 11 chr10 77782886 77783076 -67806212 - L1MB3 LINE L1 -1317 4829 4616 * 746 231 120 57 chr10 77783076 77783409 -67805879 - MSTD LTR MaLR -2 394 41 27739 61 15 5 chr10 77783604 77788321 -67800967 - L1PA6 LINE L1 -3 6151 1393 288 169 117 13 chr10 77788658 77788735 -67800553 + LTR29 LTR ERV1 4 88 -534 * 1015 177 58 74 chr10 77788719 77788773 -67800515 + MER39 LTR ERV1 260 313 -394 2190 70 17 26 chr10 77788773 77789075 -67800213 + AluY SINE Alu 1 299 -12 1015 177 58 74 chr10 77789075 77789331 -67799957 + MER39 LTR ERV1 313 565 -142 1318 145 0 62 chr10 77789331 77789573 -67799715 - AluJb SINE Alu 0 312 86 605 154 33 8 chr10 77789574 77789718 -67799570 + MER39 LTR ERV1 457 564 -1 849 218 91 10 chr10 77789886 77790194 -67799094 - Charlie2 DNA MER1_type 0 2862 2530 1002 169 45 30 chr10 77790245 77790446 -67798842 + MER20 DNA MER1_type 16 219 0 958 211 176 49 chr10 77790446 77791034 -67798254 - Charlie2 DNA MER1_type -350 2512 1850 618 218 104 60 chr10 77792896 77793213 -67796075 - L1ME LINE L1 -390 5774 5444 1978 155 3 0 chr10 77793905 77794202 -67795086 - AluSx SINE Alu -14 298 1 1919 155 0 37 chr10 77794253 77794576 -67794712 - AluJb SINE Alu -1 311 1 936 177 97 113 chr10 77795281 77795648 -67793640 + MLT1A1 LTR MaLR 1 365 0 612 157 0 0 chr10 77796377 77796466 -67792822 - AluJb SINE Alu -223 89 1 2349 95 3 0 chr10 77796785 77797081 -67792207 + AluSx SINE Alu 1 297 -15 374 191 11 45 chr10 77797684 77797773 -67791515 + MER96 DNA MER1_type? 12 97 -78 287 129 48 0 chr10 77797775 77797837 -67791451 - Charlie5 DNA MER1_type -57 2555 2491 269 159 222 0 chr10 77797897 77797960 -67791328 - MER5B DNA MER1_type -101 77 1 224 369 53 39 chr10 77797960 77798178 -67791110 - L2 LINE L2 -585 2728 2444 271 315 0 0 chr10 77798514 77798587 -67790701 + (TA)n Simple_repeat Simple_repeat 1 73 0 2260 105 7 0 chr10 77800082 77800376 -67788912 + AluSx SINE Alu 1 296 -16 270 0 0 0 chr10 77800817 77800847 -67788441 + (T)n Simple_repeat Simple_repeat 1 30 0 552 294 82 102 chr10 77803714 77804401 -67784887 - L2 LINE L2 -22 3250 2590 1087 181 0 5 chr10 77804510 77804698 -67784590 + AluJo SINE Alu 6 192 -120 1537 121 94 35 chr10 77804703 77805043 -67784245 - THE1C LTR MaLR -15 360 1 735 105 0 0 chr10 77805043 77805138 -67784150 + AluJo SINE Alu 188 282 -30 287 230 151 75 chr10 77805529 77805703 -67783585 - L1M4 LINE L1 -2098 4048 3850 2251 114 0 0 chr10 77805703 77806000 -67783288 - AluSq SINE Alu -16 297 1 287 230 151 75 chr10 77806000 77806064 -67783224 - L1M4 LINE L1 -2296 3850 3792 2912 215 89 21 chr10 77806123 77806664 -67782624 - L1ME1 LINE L1 -4 6162 5659 1046 177 84 26 chr10 77806664 77806890 -67782398 + MER8 DNA MER2_type 1 239 0 2912 215 89 21 chr10 77806890 77807205 -67782083 - L1ME1 LINE L1 -507 5659 5210 351 0 0 0 chr10 77807205 77807244 -67782044 + (CA)n Simple_repeat Simple_repeat 2 40 0 2912 215 89 21 chr10 77807244 77807357 -67781931 - L1ME1 LINE L1 -956 5210 5106 437 167 29 39 chr10 77807377 77807479 -67781809 - FLAM_C SINE Alu -12 131 31 1230 225 34 54 chr10 77807577 77807936 -67781352 - L1ME1 LINE L1 -1051 5095 4746 2129 111 19 16 chr10 77807936 77808243 -67781045 + AluSx SINE Alu 1 308 -4 1230 225 34 54 chr10 77808243 77808349 -67780939 - L1ME1 LINE L1 -1400 4746 4639 957 191 0 0 chr10 77808350 77808497 -67780791 + FRAM SINE Alu 1 146 -30 799 217 92 0 chr10 77808514 77808754 -67780534 - L1ME1 LINE L1 -1499 4647 4386 33677 82 14 17 chr10 77808879 77810108 -67779180 - L1P LINE L1 -1063 5083 3852 2403 68 0 0 chr10 77810108 77810403 -67778885 - AluY SINE Alu -15 296 2 33677 82 14 17 chr10 77810403 77814247 -67775041 - L1P LINE L1 -2294 3852 24 1007 164 0 6 chr10 77815138 77815303 -67773985 + FRAM SINE Alu 1 161 -15 282 29 0 0 chr10 77815405 77815440 -67773848 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2299 87 0 10 chr10 77815520 77815829 -67773459 - AluSg1 SINE Alu -3 306 1 439 259 27 0 chr10 77816024 77816062 -67773226 - L1MA10 LINE L1 -4 6330 6293 1270 195 37 126 chr10 77816062 77816174 -67773114 - L1ME2 LINE L1 -37 6127 6007 1656 183 3 10 chr10 77816174 77816464 -67772824 + AluJo SINE Alu 1 288 -24 1495 190 12 0 chr10 77816474 77816732 -67772556 + AluJb SINE Alu 1 261 -51 1270 195 37 126 chr10 77816732 77817172 -67772116 - L1ME2 LINE L1 -166 5998 5614 261 210 32 0 chr10 77817172 77817234 -67772054 - L1ME2 LINE L1 -917 5229 5166 1887 225 135 0 chr10 77817267 77817880 -67771408 + L1ME LINE L1 4253 4948 -1198 243 311 48 0 chr10 77818092 77818195 -67771093 - LTR52 LTR ERVL -200 221 114 645 192 62 7 chr10 77818214 77818360 -67770928 - LTR52 LTR ERVL -265 156 3 704 151 24 24 chr10 77818415 77818541 -67770747 + FLAM_C SINE Alu 1 126 -17 961 232 35 4 chr10 77818557 77818816 -67770472 + L1ME LINE L1 5014 5280 -866 718 113 0 60 chr10 77818818 77818951 -67770337 + FLAM_C SINE Alu 1 125 -18 1235 223 15 71 chr10 77818951 77819050 -67770238 + L1ME LINE L1 5297 5400 -766 2126 123 10 3 chr10 77819050 77819352 -67769936 + AluSx SINE Alu 1 304 -8 1235 223 15 71 chr10 77819352 77819647 -67769641 + L1ME LINE L1 5400 5669 -497 201 74 0 0 chr10 77819657 77819684 -67769604 + (T)n Simple_repeat Simple_repeat 1 27 0 2025 84 0 4 chr10 77819743 77819993 -67769295 - AluSx SINE Alu -63 249 1 1055 159 40 13 chr10 77820008 77820235 -67769053 - L1MB8 LINE L1 0 6178 5946 2577 157 50 26 chr10 77820243 77820626 -67768662 - L1MB8 LINE L1 -315 5869 5468 926 228 0 6 chr10 77820626 77820797 -67768491 - FAM SINE Alu -5 170 1 2577 157 50 26 chr10 77820797 77820949 -67768339 - L1MB8 LINE L1 -716 5468 5321 2264 90 3 0 chr10 77820963 77821251 -67768037 + AluSq SINE Alu 1 289 -24 22 42 0 0 chr10 77822101 77822125 -67767163 + AT_rich Low_complexity Low_complexity 1 24 0 803 163 8 0 chr10 77822847 77822970 -67766318 - FLAM_C SINE Alu -19 124 1 2371 109 0 6 chr10 77823217 77823528 -67765760 - AluSx SINE Alu -3 309 1 22 56 0 0 chr10 77823590 77823626 -67765662 + AT_rich Low_complexity Low_complexity 1 36 0 675 153 120 7 chr10 77823635 77823785 -67765503 + L1MC/D LINE L1 5635 5801 -558 420 167 122 0 chr10 77823785 77823875 -67765413 + Tigger4(Zombi) DNA MER2_type 1 101 -2630 475 351 100 19 chr10 77823917 77824276 -67765012 - L1MEd LINE L1 -5676 443 56 2272 131 42 65 chr10 77824387 77824883 -67764405 + MER31A LTR ERV1 1 485 0 2142 102 0 0 chr10 77824892 77825167 -67764121 + AluSx SINE Alu 1 275 -37 543 208 0 0 chr10 77825479 77825720 -67763568 + (TA)n Simple_repeat Simple_repeat 1 241 0 867 169 0 0 chr10 77825755 77825885 -67763403 - AluJb SINE Alu -54 258 129 237 278 247 10 chr10 77826161 77826258 -67763030 + MIR SINE MIR 46 165 -97 6580 178 67 91 chr10 77826352 77828020 -67761268 + L1MA4 LINE L1 474 2258 -4910 1033 70 0 0 chr10 77828020 77828149 -67761139 + AluSc SINE Alu 173 301 -8 6580 178 67 91 chr10 77828149 77828550 -67760738 + L1MA4 LINE L1 2258 2667 -4501 2509 179 53 49 chr10 77828550 77829250 -67760038 + L1MA4 LINE L1 4260 4962 -2205 2154 132 0 0 chr10 77829251 77829554 -67759734 + AluSx SINE Alu 1 303 -9 2594 130 37 0 chr10 77829557 77829989 -67759299 + L1MA4 LINE L1 6506 6953 -368 * 6813 159 27 25 chr10 77829987 77831329 -67757959 + L1P LINE L1 77 1421 -4725 2691 94 50 44 chr10 77831458 77831677 -67757611 - L1M1 LINE L1 -4299 3266 3050 1590 201 0 18 chr10 77831677 77831960 -67757328 - AluJb SINE Alu -34 278 1 2691 94 50 44 chr10 77831960 77832240 -67757048 - L1M1 LINE L1 -4515 3050 2764 473 83 0 0 chr10 77832291 77832363 -67756925 - L1M1 LINE L1 -5208 2357 2286 10944 161 50 21 chr10 77832366 77834182 -67755106 - L1M1 LINE L1 -5379 2186 299 1888 140 17 10 chr10 77834182 77834474 -67754814 + AluJb SINE Alu 1 294 -18 10944 161 50 21 chr10 77834474 77834770 -67754518 - L1M1 LINE L1 -7266 299 13 2130 146 0 0 chr10 77834787 77835096 -67754192 - AluSx SINE Alu -2 310 2 3638 217 13 36 chr10 77835107 77835403 -67753885 - L1 LINE L1 -1408 4738 4437 2457 90 0 0 chr10 77835403 77835713 -67753575 + AluY SINE Alu 2 311 0 3638 217 13 36 chr10 77835713 77835902 -67753386 - L1 LINE L1 -1709 4437 4245 216 67 0 0 chr10 77835902 77835932 -67753356 + (TG)n Simple_repeat Simple_repeat 1 30 0 3638 217 13 36 chr10 77835932 77836352 -67752936 - L1 LINE L1 -1901 4245 3856 2084 133 3 0 chr10 77836352 77836652 -67752636 - AluSx SINE Alu -11 301 1 3638 217 13 36 chr10 77836652 77836765 -67752523 - L1 LINE L1 -2290 3856 3742 1565 193 14 30 chr10 77836776 77837072 -67752216 + AluJo SINE Alu 1 291 -21 734 268 13 0 chr10 77837121 77837278 -67752010 - FAM SINE Alu -16 159 1 1587 188 42 7 chr10 77837291 77837455 -67751833 - AluJo SINE Alu -14 298 118 225 0 0 0 chr10 77837455 77837480 -67751808 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 1587 188 42 7 chr10 77837480 77837603 -67751685 - AluJo SINE Alu -194 118 1 2498 214 31 79 chr10 77837603 77837731 -67751557 - L1 LINE L1 -2392 3754 3621 1824 101 4 23 chr10 77837731 77837988 -67751300 + AluSx SINE Alu 36 287 -25 2498 214 31 79 chr10 77837988 77838191 -67751097 - L1 LINE L1 -2525 3621 3410 320 48 0 0 chr10 77838191 77838233 -67751055 - tRNA-Ile-ATT tRNA tRNA -35 42 1 2498 214 31 79 chr10 77838233 77838564 -67750724 - L1 LINE L1 -2736 3410 3065 2175 128 0 10 chr10 77838564 77838876 -67750412 - AluSx SINE Alu -3 309 1 2361 102 0 0 chr10 77838884 77839187 -67750101 - AluSq SINE Alu -10 303 1 2498 214 31 79 chr10 77839187 77839433 -67749855 - L1 LINE L1 -3088 3058 2840 6898 134 22 33 chr10 77839447 77839471 -67749817 - L1MA5A LINE L1 -1 6296 6273 1419 180 72 36 chr10 77839471 77839588 -67749700 + AluJo SINE Alu 1 112 -200 204 40 0 0 chr10 77839588 77839613 -67749675 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 1419 180 72 36 chr10 77839613 77839773 -67749515 + AluJo SINE Alu 112 288 -24 6898 134 22 33 chr10 77839773 77841964 -67747324 - L1MA5A LINE L1 -24 6273 4058 1927 144 6 60 chr10 77841964 77842283 -67747005 + AluJb SINE Alu 1 302 -10 6898 134 22 33 chr10 77842283 77842445 -67746843 - L1MA5A LINE L1 -2239 4058 3896 1984 152 0 10 chr10 77842445 77842742 -67746546 + AluJb SINE Alu 1 294 -18 6898 134 22 33 chr10 77842742 77843084 -67746204 - L1MA5A LINE L1 -2401 3896 3616 310 123 18 0 chr10 77843221 77843278 -67746010 + AluSp/q SINE Alu 244 301 -2 307 143 36 0 chr10 77843416 77843472 -67745816 + L1ME4a LINE L1 5989 6046 -75 364 162 32 47 chr10 77844378 77844504 -67744784 + AluJ/FLAM SINE Alu 1 75 -227 1927 69 11 47 chr10 77845084 77845358 -67743930 - AluSq SINE Alu -49 264 1 538 227 14 14 chr10 77846057 77846198 -67743090 - L1MC4 LINE L1 0 8042 7902 231 261 70 52 chr10 77846205 77846320 -67742968 - L1MC4 LINE L1 -124 7918 7802 309 277 59 0 chr10 77846653 77846754 -67742534 - MIR3 SINE MIR -3 205 99 701 188 141 41 chr10 77846935 77847105 -67742183 - MER5A DNA MER1_type -1 188 2 967 205 36 51 chr10 77847542 77847737 -67741551 + Tigger7 DNA MER2_type 1 192 -541 1421 113 108 4 chr10 77847739 77847970 -67741318 + Tigger7 DNA MER2_type 2330 2584 -3 180 226 0 0 chr10 77847973 77848004 -67741284 - L2 LINE L2 -90 3223 3193 227 191 319 11 chr10 77848636 77848730 -67740558 - MIR SINE MIR -66 142 20 288 296 0 0 chr10 77849295 77849366 -67739922 + C-rich Low_complexity Low_complexity 4 74 0 2047 133 3 0 chr10 77849888 77850188 -67739100 + AluSx SINE Alu 1 301 -11 3723 218 14 30 chr10 77850188 77850608 -67738680 + L1M4 LINE L1 3845 4270 -1876 216 67 0 0 chr10 77850608 77850638 -67738650 + (CA)n Simple_repeat Simple_repeat 1 30 0 3723 218 14 30 chr10 77850638 77850827 -67738461 + L1M4 LINE L1 4270 4460 -1686 2462 90 0 0 chr10 77850827 77851137 -67738151 - AluY SINE Alu 0 311 2 3723 218 14 30 chr10 77851137 77851434 -67737854 + L1M4 LINE L1 4460 4738 -1408 2114 146 0 0 chr10 77851445 77851754 -67737534 + AluSx SINE Alu 2 310 -2 15912 164 69 28 chr10 77851771 77852067 -67737221 + L1MA2 LINE L1 13 295 -7428 1877 140 17 10 chr10 77852067 77852359 -67736929 - AluJb SINE Alu -18 294 1 15912 164 69 28 chr10 77852359 77854583 -67734705 + L1MA2 LINE L1 295 2425 -5298 1556 201 0 18 chr10 77854583 77854866 -67734422 + AluJb SINE Alu 1 278 -34 15912 164 69 28 chr10 77854866 77855219 -67734069 + L1MA2 LINE L1 2425 2762 -4961 2213 137 0 0 chr10 77855219 77855525 -67733763 + AluSx SINE Alu 1 306 -6 15912 164 69 28 chr10 77855525 77855891 -67733397 + L1MA2 LINE L1 2762 3111 -4612 2098 121 0 7 chr10 77855891 77856180 -67733108 - AluSx SINE Alu -19 293 7 15912 164 69 28 chr10 77856180 77858928 -67730360 + L1MA2 LINE L1 3111 5744 -1979 180 0 0 0 chr10 77858928 77858948 -67730340 + (CAA)n Simple_repeat Simple_repeat 2 21 0 15912 164 69 28 chr10 77858948 77859570 -67729718 + L1MA2 LINE L1 5744 6339 -1384 432 0 0 0 chr10 77859570 77859618 -67729670 + (TA)n Simple_repeat Simple_repeat 1 48 0 15912 164 69 28 chr10 77859618 77860131 -67729157 + L1MA2 LINE L1 6339 7723 0 1123 195 76 8 chr10 77860141 77860392 -67728896 + L1M4 LINE L1 4735 5002 -1144 451 192 50 0 chr10 77860393 77860492 -67728796 + MER5B DNA MER1_type 73 176 -2 681 139 52 9 chr10 77861210 77861325 -67727963 + AluJb SINE Alu 189 308 -4 198 366 0 0 chr10 77861422 77861504 -67727784 + L3 LINE CR1 1494 1575 -2 2178 122 0 34 chr10 77861504 77861824 -67727464 + AluSx SINE Alu 1 309 -3 1680 167 7 14 chr10 77861902 77862190 -67727098 - AluJo SINE Alu -26 286 1 2273 135 46 38 chr10 77862207 77862480 -67726808 + L1MB4 LINE L1 4992 5261 -919 1861 154 0 3 chr10 77862480 77862765 -67726523 - AluJb SINE Alu -28 284 1 2273 135 46 38 chr10 77862765 77863571 -67725717 + L1MB4 LINE L1 5261 6174 -6 2147 160 50 40 chr10 77863606 77863977 -67725311 + MER45R DNA AcHobo 1102 1481 -100 2310 92 0 7 chr10 77863977 77864272 -67725016 - AluSx SINE Alu -19 293 1 2147 160 50 40 chr10 77864272 77864375 -67724913 + MER45R DNA AcHobo 1481 1581 0 247 310 86 9 chr10 77864378 77864494 -67724794 + MIR SINE MIR 61 185 -77 226 289 0 0 chr10 77864494 77864546 -67724742 + (TG)n Simple_repeat Simple_repeat 1 52 0 2156 114 0 0 chr10 77864802 77865092 -67724196 - AluSq SINE Alu -23 290 1 967 180 16 16 chr10 77866360 77866549 -67722739 + MER53 DNA DNA 1 189 0 379 194 43 0 chr10 77868212 77868305 -67720983 - MER5A DNA MER1_type -1 188 92 1225 150 5 10 chr10 77868308 77868515 -67720773 - AluJo SINE Alu -101 211 6 611 237 90 0 chr10 77868557 77868713 -67720575 + MER5B DNA MER1_type 1 170 -8 2441 82 0 7 chr10 77868972 77869278 -67720010 + AluY SINE Alu 1 304 -7 328 294 28 28 chr10 77869298 77869407 -67719881 - MER5A DNA MER1_type -27 162 54 455 201 97 65 chr10 77869455 77869609 -67719679 + MIR SINE MIR 49 207 -55 2065 85 4 0 chr10 77869974 77870269 -67719019 + AluSx SINE Alu 24 319 0 481 179 8 98 chr10 77870451 77870574 -67718714 + MER81 DNA DNA 3 114 0 2244 86 9 19 chr10 77870720 77871035 -67718253 - AluSx SINE Alu 0 312 1 440 314 34 24 chr10 77871222 77871515 -67717773 + L1MC/D LINE L1 5255 5550 -2258 615 118 0 11 chr10 77871524 77871617 -67717671 - L1PA10 LINE L1 -1 6167 6076 236 327 20 10 chr10 77871898 77871999 -67717289 - L1M4 LINE L1 -978 5168 5067 466 174 61 10 chr10 77872006 77872104 -67717184 - MER58 DNA MER1_type -2166 254 152 1735 102 0 4 chr10 77872555 77872791 -67716497 + AluSq SINE Alu 1 235 -78 855 181 18 23 chr10 77872857 77873028 -67716260 + MLT1A1 LTR MaLR 196 365 0 912 158 66 0 chr10 77873028 77873180 -67716108 + L1MB5 LINE L1 6005 6166 -8 1695 185 6 10 chr10 77873191 77873504 -67715784 + AluJo SINE Alu 1 312 0 1634 202 0 25 chr10 77873506 77873823 -67715465 + AluJo SINE Alu 1 309 -3 3803 152 39 1 chr10 77873832 77874546 -67714742 + L1MB7 LINE L1 5180 5929 -255 1009 174 36 5 chr10 77874549 77874745 -67714543 + L1MB7 LINE L1 5975 6176 -8 2277 109 0 0 chr10 77874783 77875077 -67714211 + AluSx SINE Alu 1 294 -18 1494 244 134 38 chr10 77875098 77875574 -67713714 - MLT1F LTR MaLR -6 536 15 1252 246 91 35 chr10 77875619 77876049 -67713239 + MLT1J LTR MaLR 1 454 -57 569 258 29 73 chr10 77876095 77876370 -67712918 + L1M4 LINE L1 4456 4718 -1428 22 0 0 0 chr10 77876461 77876483 -67712805 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr10 77876578 77876602 -67712686 + AT_rich Low_complexity Low_complexity 1 24 0 691 138 24 30 chr10 77876613 77876780 -67712508 + GA-rich Low_complexity Low_complexity 3 168 0 347 282 74 37 chr10 77876873 77877036 -67712252 + MIR SINE MIR 14 182 -80 2439 82 0 0 chr10 77877471 77877764 -67711524 + AluSx SINE Alu 5 297 -15 180 0 0 0 chr10 77877833 77877853 -67711435 + (CAT)n Simple_repeat Simple_repeat 1 20 0 351 0 0 0 chr10 77878544 77878583 -67710705 + (CA)n Simple_repeat Simple_repeat 1 39 0 1162 91 0 0 chr10 77878586 77878729 -67710559 - AluSq/x SINE Alu -168 145 3 270 56 0 0 chr10 77878889 77878925 -67710363 + (CA)n Simple_repeat Simple_repeat 2 37 0 330 344 111 16 chr10 77879790 77880034 -67709254 - L3b LINE CR1 -76 1507 1241 1468 144 156 0 chr10 77880053 77880303 -67708985 - AluJb SINE Alu -22 290 2 210 297 51 36 chr10 77880833 77880971 -67708317 + L2 LINE L2 2705 2844 -470 986 184 23 2 chr10 77881001 77881407 -67707881 - ALR/Alpha Satellite centromeric 0 414 1 5967 207 53 36 chr10 77881481 77882590 -67706698 - L1MB8 LINE L1 -6 6172 5084 2045 107 72 0 chr10 77882590 77882881 -67706407 - AluSq SINE Alu -1 312 1 5967 207 53 36 chr10 77882881 77883504 -67705784 - L1MB8 LINE L1 -1094 5084 4473 2434 55 3 35 chr10 77883504 77883814 -67705474 - AluY SINE Alu -11 300 1 5967 207 53 36 chr10 77883814 77883955 -67705333 - L1MB8 LINE L1 -1705 4473 3198 2257 105 23 18 chr10 77883961 77884304 -67704984 - L1MB7 LINE L1 -19 6165 5821 287 340 60 84 chr10 77884305 77884590 -67704698 + L2 LINE L2 2995 3272 0 248 266 375 8 chr10 77885924 77886052 -67703236 + MER5B DNA MER1_type 3 177 -1 777 215 53 75 chr10 77886061 77886108 -67703180 + MER58A DNA MER1_type 1 48 -2372 186 43 0 0 chr10 77886108 77886131 -67703157 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2289 92 0 0 chr10 77886133 77886426 -67702862 - AluSx SINE Alu -19 293 1 777 215 53 75 chr10 77886426 77886603 -67702685 + MER58A DNA MER1_type 49 223 -1 1594 157 46 25 chr10 77886706 77886986 -67702302 - AluJo SINE Alu -24 288 3 2311 116 3 0 chr10 77887354 77887665 -67701623 + AluSx SINE Alu 1 312 0 500 268 106 35 chr10 77888411 77888609 -67700679 - MIR SINE MIR 0 262 51 336 315 114 45 chr10 77889147 77889227 -67700061 - L1M4 LINE L1 -433 5745 5672 1504 157 20 4 chr10 77889227 77889476 -67699812 - AluJo SINE Alu -11 301 49 336 315 114 45 chr10 77889476 77889703 -67699585 - L1M4 LINE L1 -506 5672 5414 1423 149 116 11 chr10 77890890 77891158 -67698130 + AluSg SINE Alu 1 296 -14 606 153 0 31 chr10 77891158 77891256 -67698032 + AluSg/x SINE Alu 135 229 -81 1936 133 29 16 chr10 77891503 77891811 -67697477 - AluJo SINE Alu 0 312 1 302 339 55 28 chr10 77892038 77892147 -67697141 - L2 LINE L2 -12 3260 3149 183 286 20 0 chr10 77892749 77892798 -67696490 - L2 LINE L2 -2 3311 3262 456 302 98 9 chr10 77892847 77893062 -67696226 - L2 LINE L2 -218 3054 2821 2080 128 0 3 chr10 77893293 77893581 -67695707 + AluSx SINE Alu 1 287 -25 945 101 0 0 chr10 77893581 77893607 -67695681 + AluSq SINE Alu 1 314 0 445 239 50 63 chr10 77893731 77893891 -67695397 + L1MA10 LINE L1 6008 6334 0 266 337 74 20 chr10 77894169 77894371 -67694917 - L2 LINE L2 -556 2758 2546 196 308 13 39 chr10 77894359 77894437 -67694851 - MER5B DNA MER1_type -102 76 1 * 1755 154 22 0 chr10 77894826 77895098 -67694190 + AluJb SINE Alu 1 278 -34 207 292 125 14 chr10 77895155 77895299 -67693989 + L2 LINE L2 1726 1885 -1429 264 322 31 106 chr10 77895338 77895597 -67693691 + L2 LINE L2 2216 2448 -866 2412 82 3 13 chr10 77895597 77895903 -67693385 - AluSq SINE Alu -10 303 1 264 322 31 106 chr10 77895903 77895963 -67693325 + L2 LINE L2 2448 2511 -803 20917 186 39 16 chr10 77896704 77897556 -67691732 + L1PA12 LINE L1 747 1578 -6006 1967 134 7 26 chr10 77897556 77897862 -67691426 + AluSq SINE Alu 1 300 -13 20917 186 39 16 chr10 77897862 77898761 -67690527 + L1PA12 LINE L1 1578 2455 -5129 2335 104 10 0 chr10 77898761 77899070 -67690218 + AluSx SINE Alu 1 312 0 20917 186 39 16 chr10 77899070 77902101 -67687187 + L1PA12 LINE L1 2455 6453 -1131 471 113 0 0 chr10 77902683 77902763 -67686525 + (ATG)n Simple_repeat Simple_repeat 3 82 0 6979 72 17 8 chr10 77903420 77904568 -67684720 + L1PA12 LINE L1 6440 7603 -3 2798 214 56 43 chr10 77904766 77905411 -67683877 - MER82 DNA MER2_type 0 653 1 2243 104 13 10 chr10 77905567 77905865 -67683423 + AluSq SINE Alu 1 299 -14 232 208 0 19 chr10 77907073 77907126 -67682162 + L2 LINE L2 3219 3270 -2 199 189 0 0 chr10 77908093 77908130 -67681158 + L2 LINE L2 3277 3313 0 2279 107 10 7 chr10 77908162 77908472 -67680816 + AluSx SINE Alu 1 311 -1 206 277 15 46 chr10 77909113 77909178 -67680110 + L2 LINE L2 3202 3264 -8 532 176 10 0 chr10 77909230 77909332 -67679956 - L1MC3 LINE L1 -353 7432 7330 924 167 42 0 chr10 77909814 77909982 -67679306 + MER58B DNA MER1_type 167 341 0 1132 69 0 0 chr10 77910229 77910360 -67678928 - AluY SINE Alu -180 131 1 389 294 0 0 chr10 77910508 77910610 -67678678 + MIR3 SINE MIR 86 187 -21 640 119 50 0 chr10 77910790 77910891 -67678397 + AluSq/x SINE Alu 2 107 -206 1583 126 4 9 chr10 77910894 77911125 -67678163 + AluY SINE Alu 62 291 -20 1515 120 19 100 chr10 77911188 77911311 -67677977 + L1PA16 LINE L1 5875 6006 -160 1985 152 3 3 chr10 77911311 77911613 -67677675 + AluJb SINE Alu 1 302 -10 1515 120 19 100 chr10 77911613 77911798 -67677490 + L1PA16 LINE L1 6006 6158 -8 2166 113 3 0 chr10 77912479 77912770 -67676518 - AluSx SINE Alu -20 292 1 224 304 61 43 chr10 77913064 77913179 -67676109 - MER5A DNA MER1_type 0 189 73 * 277 315 42 28 chr10 77913093 77913236 -67676052 + MER5A DNA MER1_type 43 187 -2 497 216 183 20 chr10 77913281 77913434 -67675854 + MER5A DNA MER1_type 10 187 -2 1866 159 7 20 chr10 77913450 77913746 -67675542 - AluJo SINE Alu -20 292 1 603 312 71 25 chr10 77914811 77915205 -67674083 + L1MEd LINE L1 237 648 -5471 1962 160 76 44 chr10 77915205 77915249 -67674039 + MSTB1 LTR MaLR 1 42 -390 2219 102 14 0 chr10 77915249 77915542 -67673746 - AluSx SINE Alu -15 297 1 1962 160 76 44 chr10 77915542 77915904 -67673384 + MSTB1 LTR MaLR 42 420 -12 318 218 56 95 chr10 77916031 77916210 -67673078 + L1MEd LINE L1 782 953 -5166 409 220 202 63 chr10 77916222 77916366 -67672922 + MLT1J LTR MaLR 227 350 -161 1732 174 149 41 chr10 77916366 77916597 -67672691 - LTR2B LTR ERV1 0 490 285 186 43 0 0 chr10 77916597 77916620 -67672668 + (CAGAA)n Simple_repeat Simple_repeat 1 23 0 1732 174 149 41 chr10 77916620 77916830 -67672458 - LTR2B LTR ERV1 -205 285 1 409 220 202 63 chr10 77916830 77916908 -67672380 + MLT1J LTR MaLR 350 480 -31 2385 106 0 6 chr10 77917203 77917514 -67671774 + AluSq SINE Alu 1 309 -4 40 21 0 0 chr10 77917590 77917637 -67671651 + AT_rich Low_complexity Low_complexity 1 47 0 240 242 110 92 chr10 77917777 77917837 -67671451 + L1MC4a LINE L1 5893 5950 -1858 2304 148 22 27 chr10 77917837 77918203 -67671085 + THE1B LTR MaLR 1 364 0 240 242 110 92 chr10 77918203 77918423 -67670865 + L1MC4a LINE L1 5950 6178 -1630 234 0 0 0 chr10 77918663 77918689 -67670599 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 1425 173 50 32 chr10 77918692 77918969 -67670319 - AluJo SINE Alu -30 282 1 660 176 10 0 chr10 77918999 77919124 -67670164 + AluJb SINE Alu 182 307 0 789 190 139 44 chr10 77919478 77919657 -67669631 - MER33 DNA MER1_type -2261 324 163 1605 210 0 0 chr10 77919657 77919938 -67669350 - AluJo SINE Alu -24 288 8 789 190 139 44 chr10 77919938 77920053 -67669235 - MER33 DNA MER1_type -2422 163 2 694 176 0 0 chr10 77920447 77920555 -67668733 - FLAM_A SINE Alu -34 108 1 631 0 25 0 chr10 77920960 77921039 -67668249 + (TCTA)n Simple_repeat Simple_repeat 2 82 0 2274 113 0 3 chr10 77921106 77921416 -67667872 - AluSg SINE Alu -1 309 1 651 277 174 66 chr10 77922320 77922439 -67666849 + L3 LINE CR1 994 1099 -478 1746 169 3 14 chr10 77922439 77922729 -67666559 - AluJb SINE Alu -25 287 1 651 277 174 66 chr10 77922729 77923096 -67666192 + L3 LINE CR1 1099 1533 -44 2265 119 0 0 chr10 77923407 77923718 -67665570 + AluSx SINE Alu 1 311 -1 23 33 0 0 chr10 77924675 77924705 -67664583 + AT_rich Low_complexity Low_complexity 1 30 0 302 303 0 28 chr10 77925140 77925249 -67664039 + CT-rich Low_complexity Low_complexity 2 107 0 1202 122 66 81 chr10 77925536 77925807 -67663481 - L1MC3 LINE L1 -21 7764 7498 2203 104 3 32 chr10 77925818 77926134 -67663154 - AluSx SINE Alu -5 307 1 2416 69 0 3 chr10 77927799 77928089 -67661199 - AluY SINE Alu -20 291 3 601 254 107 42 chr10 77928651 77928888 -67660400 - L1MC5 LINE L1 -204 7757 7537 2105 117 7 3 chr10 77928888 77929178 -67660110 + AluSx SINE Alu 1 291 -21 180 0 0 0 chr10 77929178 77929198 -67660090 + (TA)n Simple_repeat Simple_repeat 2 21 0 601 254 107 42 chr10 77929198 77929344 -67659944 - L1MC5 LINE L1 -423 7538 7348 404 256 179 23 chr10 77929485 77929747 -67659541 - L2 LINE L2 -1050 2264 1962 1996 127 0 0 chr10 77929780 77930055 -67659233 - AluSx SINE Alu -17 295 21 184 216 0 0 chr10 77930493 77930530 -67658758 + MIR SINE MIR 111 147 -61 595 159 167 0 chr10 77930534 77930672 -67658616 - MER5A DNA MER1_type -24 165 5 4482 149 83 6 chr10 77930783 77931613 -67657675 - L1MB3 LINE L1 0 6183 5290 1277 112 162 0 chr10 77931624 77931821 -67657467 - MER30 DNA MER1_type -1 229 1 2561 131 136 0 chr10 77931984 77932412 -67656876 - LTR19A LTR ERV1 0 486 1 289 265 61 60 chr10 77935402 77935578 -67653710 - MER5B DNA MER1_type 0 189 3 2078 235 95 72 chr10 77936620 77937327 -67651961 - L1ME3A LINE L1 -28 6125 5436 3165 142 20 20 chr10 77937327 77937714 -67651574 - L1MB8 LINE L1 -1 6177 5788 9041 69 3 1 chr10 77937714 77938783 -67650505 - MER11C LTR ERVK 0 1071 1 3165 142 20 20 chr10 77938783 77938931 -67650357 - L1MB8 LINE L1 -389 5789 5642 2078 235 95 72 chr10 77938931 77939202 -67650086 - L1ME3A LINE L1 -717 5436 5173 754 182 41 0 chr10 77939202 77939323 -67649965 - FLAM_A SINE Alu -7 126 1 2078 235 95 72 chr10 77939323 77939587 -67649701 - L1ME3A LINE L1 -980 5173 4917 1546 191 24 10 chr10 77939587 77939885 -67649403 - AluJo SINE Alu -10 302 1 2078 235 95 72 chr10 77939885 77940197 -67649091 - L1ME3A LINE L1 -1236 4917 4532 700 266 66 16 chr10 77940313 77940569 -67648719 - L1ME3A LINE L1 -1777 4352 4084 2168 129 0 7 chr10 77940665 77940967 -67648321 - AluSx SINE Alu -12 300 1 1524 278 77 38 chr10 77941063 77941444 -67647844 - L1MEd LINE L1 -4598 1712 1347 2168 134 3 0 chr10 77941444 77941749 -67647539 - AluSx SINE Alu -6 306 1 1524 278 77 38 chr10 77941749 77942310 -67646978 - L1MEd LINE L1 -4963 1347 673 1821 171 7 13 chr10 77942310 77942619 -67646669 + AluJb SINE Alu 1 307 -5 1524 278 77 38 chr10 77942619 77942697 -67646591 - L1MEd LINE L1 -5637 673 600 213 186 70 0 chr10 77943452 77943495 -67645793 - L2 LINE L2 -11 3261 3216 1799 185 10 3 chr10 77943511 77943809 -67645479 + AluJb SINE Alu 1 300 -12 237 349 223 21 chr10 77943872 77944642 -67644646 - L2 LINE L2 -1670 1644 719 581 212 187 25 chr10 77944643 77944846 -67644442 - MER106A DNA MER1_type 0 236 1 573 284 67 34 chr10 77945536 77945775 -67643513 + MIR SINE MIR 2 248 -14 5151 138 31 38 chr10 77946533 77947413 -67641875 + L1MA4 LINE L1 4555 5419 -881 2585 61 0 10 chr10 77947413 77947726 -67641562 + AluY SINE Alu 1 310 -1 5151 138 31 38 chr10 77947726 77948601 -67640687 + L1MA4 LINE L1 5419 6299 -1 272 349 85 31 chr10 77948893 77949022 -67640266 + L2 LINE L2 3109 3244 -28 1850 157 11 0 chr10 77949531 77949818 -67639470 + AluJo SINE Alu 1 290 -22 2451 59 0 13 chr10 77950149 77950452 -67638836 + AluY SINE Alu 1 299 -12 241 217 187 74 chr10 77950617 77950820 -67638468 - L1ME4a LINE L1 -14 6107 5882 1015 193 69 78 chr10 77950875 77951124 -67638164 + MER2 DNA MER2_type 1 248 -97 2215 109 7 10 chr10 77951124 77951428 -67637860 - AluSx SINE Alu -9 303 1 1015 193 69 78 chr10 77951428 77951526 -67637762 + MER2 DNA MER2_type 248 345 0 1973 149 0 10 chr10 77952163 77952464 -67636824 - AluJb SINE Alu -14 298 1 2481 70 0 7 chr10 77952857 77953159 -67636129 - AluY SINE Alu -11 300 1 185 208 151 0 chr10 77953650 77953703 -67635585 + L2 LINE L2 3209 3269 -3 251 219 193 44 chr10 77953824 77953942 -67635346 - MIR SINE MIR -77 131 7 1851 112 81 0 chr10 77954045 77954330 -67634958 + AluSg SINE Alu 1 308 -2 2495 77 0 3 chr10 77954654 77954966 -67634322 + AluY SINE Alu 1 311 0 1380 124 15 5 chr10 77954977 77955179 -67634109 + AluJb SINE Alu 86 289 -23 1005 122 181 18 chr10 77955997 77956218 -67633070 - Tigger2 DNA MER2_type 0 2718 2462 3488 125 49 45 chr10 77956276 77956819 -67632469 - Tigger2 DNA MER2_type -1964 754 206 2195 110 3 0 chr10 77956819 77957111 -67632177 + AluSx SINE Alu 5 297 -15 3488 125 49 45 chr10 77957111 77957216 -67632072 - Tigger2 DNA MER2_type -2512 206 103 753 127 0 95 chr10 77957796 77957954 -67631334 - FLAM_C SINE Alu 0 143 1 2026 123 32 41 chr10 77958002 77958342 -67630946 + MER1B DNA MER1_type 1 337 0 2600 50 0 0 chr10 77958450 77958749 -67630539 + AluY SINE Alu 1 299 -12 651 179 55 7 chr10 77958790 77958935 -67630353 - MER96B DNA MER1_type? -184 233 82 1033 207 0 65 chr10 77958935 77959167 -67630121 + AluSx SINE Alu 2 218 -94 552 123 47 38 chr10 77959201 77959307 -67629981 + AluJb SINE Alu 198 304 -8 334 200 0 0 chr10 77959314 77959379 -67629909 - MER96B DNA MER1_type? -324 93 29 1705 173 26 29 chr10 77959405 77959718 -67629570 + AluJo SINE Alu 1 312 0 372 200 48 0 chr10 77960781 77960886 -67628402 + L1MC4 LINE L1 7933 8042 0 27 62 0 0 chr10 77960904 77960952 -67628336 + AT_rich Low_complexity Low_complexity 1 48 0 4514 124 52 7 chr10 77962042 77962733 -67626555 + MER72 LTR ERV1 1 722 0 25 51 0 0 chr10 77963002 77963041 -67626247 + AT_rich Low_complexity Low_complexity 1 39 0 479 293 98 58 chr10 77963083 77963193 -67626095 + MIR SINE MIR 20 124 -138 2244 108 0 0 chr10 77963193 77963481 -67625807 + AluSc SINE Alu 1 288 -21 479 293 98 58 chr10 77963481 77963575 -67625713 + MIR SINE MIR 124 232 -30 1019 175 0 12 chr10 77963611 77963771 -67625517 + FRAM SINE Alu 1 149 -27 1650 150 26 36 chr10 77963773 77964079 -67625209 - AluJb SINE Alu -9 303 1 1207 186 141 66 chr10 77964354 77964822 -67624466 - L1ME2 LINE L1 -8 6227 5725 737 226 43 16 chr10 77964819 77965076 -67624212 - L1ME2 LINE L1 -3985 2411 2148 * 1696 178 10 24 chr10 77965142 77965434 -67623854 - AluJo SINE Alu -22 290 3 2034 146 13 3 chr10 77965470 77965772 -67623516 - AluSx SINE Alu -7 305 1 945 242 23 9 chr10 77965804 77966023 -67623265 - MER58A DNA MER1_type 0 224 3 382 149 0 15 chr10 77966034 77966101 -67623187 + MER1B DNA MER1_type 264 329 0 940 71 8 0 chr10 77966328 77966454 -67622834 + AluY SINE Alu 184 310 -1 529 257 186 44 chr10 77966507 77966639 -67622649 + MIR SINE MIR 1 113 -149 3723 104 23 11 chr10 77966639 77967160 -67622128 - MER1A DNA MER1_type 0 527 1 529 257 186 44 chr10 77967160 77967253 -67622035 + MIR SINE MIR 113 258 -4 2006 148 0 29 chr10 77967359 77967500 -67621788 + AluSx SINE Alu 1 145 -167 2273 107 3 0 chr10 77967500 77967810 -67621478 + AluSx SINE Alu 1 311 -1 2006 148 0 29 chr10 77967810 77967978 -67621310 + AluSx SINE Alu 145 301 -11 1973 150 3 3 chr10 77968047 77968340 -67620948 + AluSx SINE Alu 1 293 -19 2341 79 10 0 chr10 77968966 77969269 -67620019 + AluSp SINE Alu 1 306 -7 447 250 132 28 chr10 77969401 77969613 -67619675 + L1ME4a LINE L1 5842 6075 -46 22 0 0 0 chr10 77969613 77969635 -67619653 + AT_rich Low_complexity Low_complexity 1 22 0 2386 101 0 0 chr10 77969712 77970019 -67619269 - AluSc SINE Alu -2 307 1 1425 143 132 0 chr10 77970173 77970445 -67618843 - AluJo SINE Alu -4 308 1 642 255 116 88 chr10 77970714 77971212 -67618076 - L2 LINE L2 -1 3312 2756 1321 77 14 23 chr10 77971475 77971696 -67617592 - L1MA1 LINE L1 -105 6197 5979 277 104 209 0 chr10 77971697 77971764 -67617524 - L1 LINE L1 -2987 3159 3079 2424 74 0 0 chr10 77971764 77972063 -67617225 - AluY SINE Alu -12 299 1 824 152 0 8 chr10 77972091 77972216 -67617072 - FLAM_A SINE Alu -9 124 1 2343 83 0 22 chr10 77972593 77972905 -67616383 + AluSq SINE Alu 1 305 -8 2305 106 0 0 chr10 77974429 77974730 -67614558 + AluSx SINE Alu 1 301 -11 1056 107 0 0 chr10 77975011 77975151 -67614137 - AluSp SINE Alu -45 268 129 222 136 0 0 chr10 77975176 77975220 -67614068 + (TCCC)n Simple_repeat Simple_repeat 1 44 0 1303 147 10 10 chr10 77975227 77975450 -67613838 - AluJb SINE Alu 0 312 86 807 244 91 87 chr10 77975534 77975972 -67613316 - MLT1J LTR MaLR -69 442 3 435 256 139 64 chr10 77975997 77976190 -67613098 - L1ME4a LINE L1 -217 5904 5727 1963 164 0 3 chr10 77976190 77976483 -67612805 - AluJb SINE Alu -16 296 5 435 256 139 64 chr10 77976483 77976649 -67612639 - L1ME4a LINE L1 -394 5727 5518 2194 114 3 19 chr10 77976654 77976971 -67612317 - AluSx SINE Alu 0 312 1 1777 108 29 108 chr10 77977317 77977659 -67611629 - AluYb8 SINE Alu -3 315 1 1936 189 46 58 chr10 77977696 77978089 -67611199 + MSTA LTR MaLR 1 390 -38 2288 113 0 10 chr10 77978089 77978399 -67610889 - AluSg SINE Alu -3 307 1 1936 189 46 58 chr10 77978399 77978438 -67610850 + MSTA LTR MaLR 390 428 0 4310 168 50 4 chr10 77978438 77979256 -67610032 + MSTA-int LTR MaLR 1 856 -795 1329 136 0 0 chr10 77979277 77979493 -67609795 + AluSg/x SINE Alu 98 313 0 3730 164 68 18 chr10 77979501 77979829 -67609459 + MSTA-int LTR MaLR 852 1162 -489 2348 108 0 6 chr10 77979829 77980143 -67609145 + AluSx SINE Alu 1 312 0 3730 164 68 18 chr10 77980143 77980574 -67608714 + MSTA-int LTR MaLR 1162 1649 -2 1559 152 196 0 chr10 77980578 77980914 -67608374 + MSTA LTR MaLR 27 428 0 2274 110 3 0 chr10 77981715 77982024 -67607264 + AluSx SINE Alu 1 310 -2 1874 172 3 3 chr10 77983090 77983392 -67605896 + AluJo SINE Alu 1 302 -10 938 163 85 18 chr10 77983435 77983670 -67605618 - MER21B LTR ERV1 -26 905 579 1239 214 24 63 chr10 77983692 77984024 -67605264 - MER21B LTR ERV1 -532 331 13 252 130 19 0 chr10 77984259 77984313 -67604975 - L1MA10 LINE L1 -1 6333 6279 388 52 0 19 chr10 77984314 77984328 -67604960 - L1P LINE L1 -769 5392 5379 3417 119 32 94 chr10 77984328 77984841 -67604447 - L1PB4 LINE L1 -1 6857 6399 2098 109 21 3 chr10 77984841 77985125 -67604163 - AluSq SINE Alu -24 289 1 3417 119 32 94 chr10 77985125 77985326 -67603962 - L1PB4 LINE L1 -459 6399 6187 388 52 0 19 chr10 77985326 77985380 -67603908 - L1P LINE L1 -782 5379 5330 210 37 0 0 chr10 77985383 77985410 -67603878 + (TC)n Simple_repeat Simple_repeat 2 28 0 1911 126 0 14 chr10 77985419 77985696 -67603592 - AluJb SINE Alu -39 273 1 7704 201 80 14 chr10 77985696 77987554 -67601734 - L1PB4 LINE L1 -805 6043 4309 1919 144 0 47 chr10 77987554 77987874 -67601414 - AluSx SINE Alu -7 305 1 7704 201 80 14 chr10 77987874 77987945 -67601343 - L1PB4 LINE L1 -2539 4309 4244 872 143 0 0 chr10 77987945 77988071 -67601217 - FLAM_C SINE Alu -7 126 1 7704 201 80 14 chr10 77988071 77989055 -67600233 - L1PB4 LINE L1 -2604 4244 2732 1586 204 66 53 chr10 77989379 77989909 -67599379 - L1ME2 LINE L1 -40 6124 5588 1111 229 49 8 chr10 77989921 77990396 -67598892 - MLT1E LTR MaLR -7 586 1 1033 247 41 130 chr10 77990398 77991131 -67598157 - MLT1E-int LTR MaLR -15 1356 689 1096 225 102 28 chr10 77991261 77991585 -67597703 - MLT1E-int LTR MaLR -710 661 314 341 238 0 0 chr10 77991587 77991671 -67597617 - MLT1E-int LTR MaLR -1213 158 75 * 4431 170 40 29 chr10 77991664 77993107 -67596181 + L1MB7 LINE L1 4341 5806 -378 1526 141 127 50 chr10 77993107 77993469 -67595819 + MLT1B LTR MaLR 1 390 0 4431 170 40 29 chr10 77993469 77993852 -67595436 + L1MB7 LINE L1 5806 6183 -1 3399 251 148 17 chr10 77993852 77995364 -67593924 - L1MEc LINE L1 -4658 1738 36 1122 168 0 11 chr10 77995496 77995681 -67593607 + AluJo SINE Alu 112 294 -18 2127 210 101 34 chr10 77995692 77996278 -67593010 - L1ME3A LINE L1 -95 6075 5451 778 212 0 7 chr10 77996698 77996849 -67592439 - MER58A DNA MER1_type 0 224 75 616 190 151 6 chr10 77996866 77997023 -67592265 + L1ME3A LINE L1 5663 5846 -328 2411 80 7 0 chr10 77997023 77997323 -67591965 - AluSx SINE Alu -10 302 1 680 151 79 7 chr10 77997352 77997457 -67591831 + L1MB5 LINE L1 6018 6137 -37 7000 127 71 9 chr10 77997457 77998616 -67590672 + Tigger3b DNA MER2_type 1 1231 0 680 151 79 7 chr10 77998616 77998649 -67590639 + L1MB5 LINE L1 6137 6166 -8 277 244 0 0 chr10 77998669 77998714 -67590574 - MER58A DNA MER1_type -176 48 4 753 231 47 63 chr10 77998751 77998776 -67590512 + MIR SINE MIR 11 35 -227 2119 122 3 0 chr10 77998776 77999064 -67590224 + AluY SINE Alu 1 289 -22 753 231 47 63 chr10 77999064 77999293 -67589995 + MIR SINE MIR 35 261 -1 1802 152 17 7 chr10 77999634 77999936 -67589352 - AluJo SINE Alu -7 305 1 863 280 59 43 chr10 77999990 78000176 -67589112 - L1MEd LINE L1 -5295 824 642 679 229 106 16 chr10 78000176 78000364 -67588924 - MER3 DNA MER1_type 0 209 5 863 280 59 43 chr10 78000364 78000548 -67588740 - L1MEd LINE L1 -5477 642 448 2022 130 13 10 chr10 78001142 78001450 -67587838 - AluSx SINE Alu -3 309 1 662 116 0 11 chr10 78001454 78001549 -67587739 - FLAM_A SINE Alu -16 126 33 1762 144 0 0 chr10 78001887 78002144 -67587144 + AluSx SINE Alu 44 300 -12 191 344 38 46 chr10 78003355 78003486 -67585802 - L2 LINE L2 -225 3047 2918 1355 222 62 19 chr10 78003684 78004008 -67585280 - L1ME2 LINE L1 -299 5865 5528 180 303 40 26 chr10 78004599 78004675 -67584613 - MIR SINE MIR -122 140 64 180 0 0 0 chr10 78005887 78005907 -67583381 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 1681 155 7 21 chr10 78005910 78006194 -67583094 - AluJo SINE Alu -31 281 2 774 164 25 8 chr10 78008261 78008383 -67580905 - FLAM_A SINE Alu -9 124 1 1695 202 68 30 chr10 78008732 78008965 -67580323 - MLT1C LTR MaLR 0 467 244 2206 117 0 0 chr10 78008965 78009263 -67580025 - AluSg SINE Alu -12 298 1 2065 130 33 0 chr10 78009263 78009564 -67579724 - AluJb SINE Alu -1 311 1 1695 202 68 30 chr10 78009564 78009769 -67579519 - MLT1C LTR MaLR -222 245 11 2096 117 0 17 chr10 78009973 78010273 -67579015 - AluSx SINE Alu -17 295 1 924 157 13 25 chr10 78010283 78010442 -67578846 - FRAM SINE Alu -22 154 1 2141 106 3 26 chr10 78010615 78010917 -67578371 + AluSx SINE Alu 1 295 -17 1072 221 18 31 chr10 78010982 78011208 -67578080 + MER58A DNA MER1_type 2 224 0 1219 153 36 0 chr10 78012490 78012686 -67576602 - AluJo SINE Alu -24 288 86 2274 94 0 7 chr10 78012982 78013281 -67576007 + AluY SINE Alu 1 297 -14 33 25 0 0 chr10 78014689 78014729 -67574559 + AT_rich Low_complexity Low_complexity 1 40 0 184 245 0 61 chr10 78014967 78015016 -67574272 - L3b LINE CR1 -19 1564 1519 267 178 0 0 chr10 78015057 78015102 -67574186 - L1MA10 LINE L1 -37 6297 6253 498 113 0 0 chr10 78015952 78016014 -67573274 - AluS SINE Alu -255 63 2 854 203 45 11 chr10 78016014 78016191 -67573097 + MER58A DNA MER1_type 41 223 -1 336 281 145 2 chr10 78016194 78016325 -67572963 - MIR3 SINE MIR -50 158 11 2342 104 0 0 chr10 78016792 78017100 -67572188 + AluY SINE Alu 1 308 -3 282 29 0 0 chr10 78017180 78017215 -67572073 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 997 159 0 0 chr10 78017317 78017474 -67571814 - FRAM SINE Alu -15 161 5 1717 148 42 35 chr10 78018349 78018659 -67570629 - AluJo SINE Alu 0 312 1 272 314 164 14 chr10 78018669 78018809 -67570479 - MIR SINE MIR -74 188 28 24 0 0 0 chr10 78018849 78018873 -67570415 + AT_rich Low_complexity Low_complexity 1 24 0 202 98 98 0 chr10 78018917 78018968 -67570320 + (TTAA)n Simple_repeat Simple_repeat 2 57 0 253 339 126 8 chr10 78018976 78019103 -67570185 + MIR SINE MIR 10 151 -111 1939 117 4 4 chr10 78019143 78019431 -67569857 + AluSx SINE Alu 18 305 0 771 149 142 0 chr10 78020326 78020467 -67568821 - MLT1B LTR MaLR -226 164 4 2152 115 3 34 chr10 78020479 78020801 -67568487 + AluJb SINE Alu 1 312 0 338 259 0 60 chr10 78020840 78020956 -67568332 + MIR SINE MIR 118 226 -36 1427 144 93 12 chr10 78021922 78022179 -67567109 + AluSg1 SINE Alu 1 278 -31 845 198 107 0 chr10 78023871 78024068 -67565220 + L1MB7 LINE L1 5947 6164 -20 1692 192 10 3 chr10 78024528 78024835 -67564453 + AluJo SINE Alu 1 309 -3 709 142 61 74 chr10 78025599 78025747 -67563541 + MER1B DNA MER1_type 193 338 -1 183 80 0 0 chr10 78025765 78025790 -67563498 + (A)n Simple_repeat Simple_repeat 1 25 0 280 183 99 14 chr10 78028932 78029003 -67560285 + MIR SINE MIR 92 168 -94 1673 160 4 0 chr10 78029268 78029530 -67559758 - AluJo SINE Alu -44 268 6 2098 114 10 26 chr10 78030113 78030246 -67559042 + AluSc SINE Alu 1 135 -174 2267 56 10 46 chr10 78030246 78030552 -67558736 + AluY SINE Alu 3 297 -14 2098 114 10 26 chr10 78030552 78030724 -67558564 + AluSc SINE Alu 135 301 -8 2256 96 0 16 chr10 78031695 78031998 -67557290 - AluSx SINE Alu -14 298 1 238 335 76 46 chr10 78033231 78033428 -67555860 - L2 LINE L2 -87 3185 2983 420 175 52 41 chr10 78034547 78034644 -67554644 + L1ME3A LINE L1 6064 6161 -9 804 267 70 88 chr10 78034827 78035257 -67554031 + MLT1J LTR MaLR 40 461 -50 1932 145 3 17 chr10 78035298 78035434 -67553854 + AluSx SINE Alu 1 137 -175 2209 83 10 0 chr10 78035434 78035722 -67553566 + AluY SINE Alu 1 291 -20 1932 145 3 17 chr10 78035722 78035875 -67553413 + AluSx SINE Alu 137 286 -26 461 131 40 20 chr10 78036288 78036387 -67552901 - AluSc SINE Alu -207 102 2 2274 84 0 23 chr10 78036617 78036926 -67552362 - AluSg SINE Alu -8 302 1 2289 113 0 0 chr10 78038071 78038372 -67550916 - AluSx SINE Alu -11 301 1 26 0 0 0 chr10 78038380 78038406 -67550882 + AT_rich Low_complexity Low_complexity 1 26 0 598 108 15 77 chr10 78039246 78039376 -67549912 - AluSq/x SINE Alu -189 123 2 2019 53 30 23 chr10 78039456 78039721 -67549567 - L1MA1 LINE L1 0 6302 6036 326 229 70 154 chr10 78039742 78039813 -67549475 - L1ME2 LINE L1 -264 5900 5825 1267 183 18 23 chr10 78039813 78040032 -67549256 + MER20 DNA MER1_type 1 218 -1 326 229 70 154 chr10 78040032 78040161 -67549127 - L1ME2 LINE L1 -339 5825 5714 869 235 12 12 chr10 78040254 78040420 -67548868 + FRAM SINE Alu 1 166 -10 556 99 27 18 chr10 78040420 78040531 -67548757 + L1MA4 LINE L1 5964 6075 -225 1084 92 7 0 chr10 78040532 78040685 -67548603 + MER41B LTR ERV1 482 635 0 1158 166 4 50 chr10 78040703 78040980 -67548308 + L1MA3 LINE L1 6042 6305 0 1907 120 84 0 chr10 78040992 78041266 -67548022 + AluSx SINE Alu 1 297 -15 348 196 42 112 chr10 78041504 78041568 -67547720 + L1ME4a LINE L1 5749 5799 -322 2282 63 49 0 chr10 78041568 78041853 -67547435 - AluSc SINE Alu -10 299 1 348 196 42 112 chr10 78041853 78041931 -67547357 + L1ME4a LINE L1 5799 5881 -240 1796 258 92 23 chr10 78042180 78042279 -67547009 - L1ME LINE L1 -4865 1468 1377 1430 133 51 95 chr10 78042279 78042426 -67546862 - AluJo SINE Alu -31 281 152 1906 122 15 0 chr10 78042426 78042689 -67546599 - AluSx SINE Alu -16 296 30 1430 133 51 95 chr10 78042689 78042835 -67546453 - AluJo SINE Alu -160 152 1 1796 258 92 23 chr10 78042835 78044128 -67545160 - L1ME LINE L1 -4956 1377 73 3615 132 112 38 chr10 78044566 78045243 -67544045 + LTR8A LTR ERV1 1 727 0 299 338 37 7 chr10 78046290 78046399 -67542889 - MIR3 SINE MIR -5 203 88 1906 103 4 8 chr10 78046399 78046660 -67542628 + AluSq SINE Alu 45 304 -9 299 338 37 7 chr10 78046660 78046686 -67542602 - MIR3 SINE MIR -120 88 64 887 293 169 37 chr10 78046686 78047274 -67542014 + L2 LINE L2 1840 2553 -761 2187 91 17 7 chr10 78047274 78047571 -67541717 - AluSg SINE Alu -10 300 1 887 293 169 37 chr10 78047571 78047743 -67541545 + L2 LINE L2 2553 2701 -613 240 149 0 0 chr10 78047802 78047849 -67541439 + (CA)n Simple_repeat Simple_repeat 2 48 0 267 250 0 0 chr10 78047876 78047928 -67541360 + MLT1F LTR MaLR 1 52 -490 1442 204 52 67 chr10 78047928 78048330 -67540958 + MSTD LTR MaLR 1 396 0 298 241 0 0 chr10 78048334 78048392 -67540896 - Tigger5 DNA MER2_type -1 2322 2265 339 185 0 0 chr10 78048415 78048469 -67540819 - Tigger5 DNA MER2_type -2268 55 2 1707 236 81 9 chr10 78048470 78048927 -67540361 + MLT1F LTR MaLR 49 538 -4 683 180 25 0 chr10 78048961 78049083 -67540205 - MER44D DNA MER2_type -1 604 480 983 130 0 0 chr10 78049086 78049224 -67540064 + MER72 LTR ERV1 585 722 0 1999 128 0 10 chr10 78049298 78049594 -67539694 + AluSx SINE Alu 4 296 -16 2519 166 0 14 chr10 78049895 78050227 -67539061 - MER44D DNA MER2_type -2003 484 103 2113 120 7 0 chr10 78050227 78050518 -67538770 + AluSx SINE Alu 1 293 -19 2519 166 0 14 chr10 78050518 78050612 -67538676 - MER44D DNA MER2_type -2384 103 9 2003 139 20 26 chr10 78050810 78051155 -67538133 - MER7A DNA MER2_type -5 341 1 349 277 126 39 chr10 78051443 78051674 -67537614 - L1M4 LINE L1 -1328 4818 4568 1754 160 7 27 chr10 78051994 78052150 -67537138 - AluJb SINE Alu -24 288 139 2167 131 0 10 chr10 78052150 78052463 -67536825 - AluSx SINE Alu 0 312 3 1754 160 7 27 chr10 78052463 78052599 -67536689 - AluJb SINE Alu -173 139 2 24 67 0 0 chr10 78052656 78052701 -67536587 + AT_rich Low_complexity Low_complexity 1 45 0 4526 152 50 10 chr10 78052763 78053568 -67535720 + L1MC1 LINE L1 5488 6324 -9 73 23 0 0 chr10 78053671 78053758 -67535530 + AT_rich Low_complexity Low_complexity 1 87 0 712 72 21 10 chr10 78054406 78054503 -67534785 - AluJb SINE Alu -144 168 71 2143 104 17 0 chr10 78054972 78055260 -67534028 + AluSq SINE Alu 1 293 -20 227 321 42 32 chr10 78055327 78055517 -67533771 - Charlie4 DNA MER1_type -1347 614 423 27 0 0 0 chr10 78055784 78055811 -67533477 + AT_rich Low_complexity Low_complexity 1 27 0 3137 225 23 20 chr10 78056142 78056581 -67532707 + L1ME1 LINE L1 5260 5703 -463 2384 76 0 35 chr10 78056581 78056897 -67532391 - AluY SINE Alu -6 305 1 3137 225 23 20 chr10 78056897 78057199 -67532089 + L1ME1 LINE L1 5703 6003 -163 2248 105 0 0 chr10 78057279 78057575 -67531713 + AluSx SINE Alu 1 296 -16 269 118 59 0 chr10 78057607 78057658 -67531630 + L1MB7 LINE L1 6131 6184 0 1684 123 22 82 chr10 78057919 78058237 -67531051 - AluJo SINE Alu -13 299 1 2449 59 0 20 chr10 78058408 78058712 -67530576 + AluSc SINE Alu 1 298 -11 331 163 0 0 chr10 78058722 78058771 -67530517 - MER94 DNA DNA -74 60 12 232 246 14 29 chr10 78058883 78058952 -67530336 - MIR SINE MIR -110 152 85 392 322 49 7 chr10 78059031 78059174 -67530114 - MIR SINE MIR -97 165 17 1985 118 31 0 chr10 78061618 78061905 -67527383 + AluSg SINE Alu 1 296 -14 358 229 107 16 chr10 78062296 78062418 -67526870 - L1ME4a LINE L1 -9 6112 5980 29 28 0 0 chr10 78063192 78063228 -67526060 + AT_rich Low_complexity Low_complexity 1 36 0 355 345 129 29 chr10 78063257 78063605 -67525683 - L1M4 LINE L1 -1134 5012 4630 243 0 0 0 chr10 78063608 78063635 -67525653 + (CA)n Simple_repeat Simple_repeat 2 28 0 925 219 35 27 chr10 78063654 78063910 -67525378 + MIR SINE MIR 1 258 -4 818 179 6 42 chr10 78064338 78064506 -67524782 + FRAM SINE Alu 2 163 -3 750 287 204 10 chr10 78064589 78065042 -67524246 + L2 LINE L2 2764 3301 -12 216 0 0 0 chr10 78065048 78065072 -67524216 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 25 65 0 0 chr10 78065080 78065126 -67524162 + AT_rich Low_complexity Low_complexity 1 46 0 458 237 8 15 chr10 78065403 78065534 -67523754 - HAL1b LINE L1 -554 794 665 321 286 41 27 chr10 78065997 78066144 -67523144 - L1MC5 LINE L1 -69 7892 7744 481 212 8 76 chr10 78066312 78066430 -67522858 + MER58A DNA MER1_type 38 147 0 567 178 10 10 chr10 78066433 78066534 -67522754 + MER58A DNA MER1_type 124 224 0 2223 105 0 7 chr10 78067227 78067531 -67521757 - AluSx SINE Alu -10 302 1 288 296 0 0 chr10 78068053 78068124 -67521164 + G-rich Low_complexity Low_complexity 4 74 0 223 191 319 11 chr10 78068689 78068783 -67520505 + MIR SINE MIR 20 142 -66 1375 113 108 4 chr10 78069449 78069680 -67519608 - Tigger7 DNA MER2_type -3 2484 2230 955 210 36 51 chr10 78069682 78069877 -67519411 - Tigger7 DNA MER2_type -2295 192 1 631 188 141 41 chr10 78070314 78070484 -67518804 + MER5A DNA MER1_type 2 188 -1 317 277 59 0 chr10 78070665 78070766 -67518522 + MIR3 SINE MIR 99 205 -3 511 227 14 14 chr10 78071221 78071362 -67517926 + L1MC4 LINE L1 7902 8042 0 2261 85 3 41 chr10 78072061 78072380 -67516908 + AluSq SINE Alu 1 307 -6 1648 155 34 0 chr10 78072521 78072786 -67516502 - AluJo SINE Alu -32 280 7 2266 166 12 19 chr10 78073289 78073717 -67515571 - L1MB8 LINE L1 -269 5909 5485 813 185 13 13 chr10 78073718 78073875 -67515413 - AluJb SINE Alu -18 294 138 1048 180 20 0 chr10 78073878 78074078 -67515210 - L1MB8 LINE L1 -690 5488 5285 267 269 41 68 chr10 78074055 78074274 -67515014 - L1M4 LINE L1 -2692 3454 3242 * 2125 88 15 0 chr10 78074303 78074576 -67514712 - AluSx SINE Alu -35 277 1 714 182 91 30 chr10 78074598 78074763 -67514525 - L1M4 LINE L1 -3285 2861 2687 2217 104 7 3 chr10 78075758 78076057 -67513231 + AluSq SINE Alu 1 300 -13 260 255 191 21 chr10 78076713 78076948 -67512340 + L1MC4 LINE L1 7768 8042 0 2303 100 0 3 chr10 78077710 78078010 -67511278 - AluSq SINE Alu -12 301 3 638 200 52 0 chr10 78078822 78078937 -67510351 + FLAM_A SINE Alu 2 122 -11 1086 210 94 7 chr10 78079794 78080070 -67509218 - AluJo SINE Alu -1 301 2 242 233 167 25 chr10 78080264 78080384 -67508904 - HAL1b LINE L1 -239 1109 973 1527 129 36 0 chr10 78080392 78080616 -67508672 - AluSx SINE Alu -23 289 58 831 299 98 23 chr10 78080670 78081232 -67508056 - HAL1b LINE L1 -547 801 198 799 210 105 11 chr10 78081284 78081465 -67507823 + MER58A DNA MER1_type 25 222 -2 2417 94 0 0 chr10 78082812 78083119 -67506169 + AluSx SINE Alu 2 308 -4 2238 114 3 0 chr10 78084128 78084434 -67504854 + AluSx SINE Alu 5 311 -1 2419 70 13 0 chr10 78085778 78085906 -67503382 + AluSq SINE Alu 3 128 -185 270 0 0 0 chr10 78085906 78085936 -67503352 + (CAA)n Simple_repeat Simple_repeat 2 31 0 2419 70 13 0 chr10 78085936 78086109 -67503179 + AluSq SINE Alu 128 308 -5 240 143 0 0 chr10 78086530 78086572 -67502716 + (CA)n Simple_repeat Simple_repeat 1 42 0 609 325 132 33 chr10 78086610 78087155 -67502133 + L2 LINE L2 1932 2530 -784 528 298 149 9 chr10 78087198 78087426 -67501862 + MIR SINE MIR 3 262 0 1885 157 126 8 chr10 78087593 78087975 -67501313 + MSTA LTR MaLR 1 427 -1 707 264 91 81 chr10 78089591 78090075 -67499213 + L2 LINE L2 2825 3313 0 2433 78 0 7 chr10 78090112 78090418 -67498870 + AluSp SINE Alu 2 305 -8 216 344 53 31 chr10 78090421 78090648 -67498640 + L2 LINE L2 2804 3035 -237 250 240 20 0 chr10 78090801 78090851 -67498437 + L2 LINE L2 3222 3272 0 1409 179 79 107 chr10 78090945 78091024 -67498264 + MER69B DNA AcHobo 583 663 -1863 1805 157 11 3 chr10 78091024 78091493 -67497795 + AluSx SINE Alu 1 471 0 1544 166 12 0 chr10 78091501 78091754 -67497534 + AluJb SINE Alu 1 256 -56 1409 179 79 107 chr10 78091754 78092184 -67497104 + MER69B DNA AcHobo 670 1089 -1437 2005 135 21 7 chr10 78092184 78092472 -67496816 + AluSx SINE Alu 3 294 -18 1409 179 79 107 chr10 78092472 78092483 -67496805 + MER69B DNA AcHobo 1089 1099 -127 513 0 0 0 chr10 78092496 78092553 -67496735 + (TA)n Simple_repeat Simple_repeat 1 57 0 712 231 98 52 chr10 78092603 78092949 -67496339 + L1MC5 LINE L1 7537 7898 -63 21 0 0 0 chr10 78094143 78094164 -67495124 + AT_rich Low_complexity Low_complexity 1 21 0 1940 164 0 3 chr10 78094600 78094904 -67494384 + AluJb SINE Alu 3 305 -7 1407 143 136 30 chr10 78095465 78095730 -67493558 - AluJo SINE Alu -19 293 1 1934 128 10 7 chr10 78096076 78096381 -67492907 - Tigger4(Zombi) DNA MER2_type -2 2729 2424 1211 178 4 13 chr10 78096384 78096609 -67492679 - Tigger4(Zombi) DNA MER2_type -2508 223 1 339 242 68 93 chr10 78096735 78096896 -67492392 + L1ME4a LINE L1 5329 5485 -2323 738 189 0 23 chr10 78096950 78097082 -67492206 + FLAM_A SINE Alu 1 129 -4 434 269 46 0 chr10 78097137 78097245 -67492043 + L2 LINE L2 3160 3272 0 308 250 142 115 chr10 78097245 78097347 -67491941 + L1ME4a LINE L1 5697 5795 -326 2162 86 62 0 chr10 78097347 78097637 -67491651 + AluSg SINE Alu 1 308 -2 308 250 142 115 chr10 78097637 78097830 -67491458 + L1ME4a LINE L1 5795 6000 -121 2062 105 0 0 chr10 78097994 78098280 -67491008 + AluSg SINE Alu 14 299 0 205 250 36 0 chr10 78098559 78098615 -67490673 - MIR SINE MIR -136 126 69 247 103 0 0 chr10 78098702 78098741 -67490547 - MADE1 DNA Mariner -5 75 37 2241 92 0 0 chr10 78098755 78099036 -67490252 + AluSx SINE Alu 20 300 -12 2061 133 0 7 chr10 78099045 78099359 -67489929 + AluSx SINE Alu 1 312 0 323 310 128 22 chr10 78099510 78099736 -67489552 + L1M4 LINE L1 2657 2906 -3240 1439 148 41 65 chr10 78099764 78100055 -67489233 + AluJo SINE Alu 22 305 -7 1459 191 62 7 chr10 78100118 78100406 -67488882 - AluJo SINE Alu 0 312 9 2259 99 0 0 chr10 78100559 78100853 -67488435 - AluSg SINE Alu -16 294 1 227 361 65 0 chr10 78101349 78101504 -67487784 + MLT1G1-int LTR MaLR 356 520 -851 268 200 16 152 chr10 78102252 78102377 -67486911 + MLT1G1-int LTR MaLR 1081 1188 -183 31 0 0 0 chr10 78102439 78102470 -67486818 + AT_rich Low_complexity Low_complexity 1 31 0 233 207 153 63 chr10 78102493 78102604 -67486684 + MLT1G1-int LTR MaLR 1227 1347 -24 847 249 210 23 chr10 78102606 78103093 -67486195 + MLT1G1 LTR MaLR 15 554 -1 2136 103 7 0 chr10 78103394 78103676 -67485612 + AluSx SINE Alu 1 284 -28 399 58 58 58 chr10 78103902 78103971 -67485317 + LTR39 LTR ERV1 50 118 -665 2935 162 13 29 chr10 78103971 78104527 -67484761 + LTR39 LTR ERV1 237 783 0 327 224 163 41 chr10 78104546 78104644 -67484644 - MIR SINE MIR -141 121 12 1668 153 4 11 chr10 78107946 78108220 -67481068 - AluJo SINE Alu -29 283 12 2458 84 7 0 chr10 78108557 78108866 -67480422 + AluSx SINE Alu 1 311 -1 2305 109 0 0 chr10 78109005 78109308 -67479980 + AluSx SINE Alu 1 303 -9 2032 116 0 3 chr10 78109794 78110111 -67479177 - AluSx SINE Alu 0 316 1 297 288 183 7 chr10 78110124 78110277 -67479011 - MIR SINE MIR -73 189 10 2087 121 14 3 chr10 78113906 78114203 -67475085 + AluSq SINE Alu 1 300 -13 26 0 0 0 chr10 78115496 78115522 -67473766 + AT_rich Low_complexity Low_complexity 1 26 0 360 0 0 0 chr10 78116022 78116062 -67473226 + (CA)n Simple_repeat Simple_repeat 2 41 0 4462 155 52 16 chr10 78116135 78117274 -67472014 - L1MB7 LINE L1 0 6184 5005 2304 103 0 0 chr10 78117306 78117606 -67471682 + AluSc SINE Alu 1 300 -9 334 195 103 0 chr10 78117608 78117695 -67471593 - L1MB7 LINE L1 -1316 4830 4735 8701 204 53 17 chr10 78118035 78120389 -67468899 - L1MA4 LINE L1 -291 6191 3922 1864 166 0 20 chr10 78120389 78120691 -67468597 - AluJo SINE Alu -16 296 1 8701 204 53 17 chr10 78120691 78123378 -67465910 - L1MA4 LINE L1 -2560 3922 1332 1723 186 7 0 chr10 78123378 78123681 -67465607 + AluJb SINE Alu 2 306 0 8701 204 53 17 chr10 78123681 78123861 -67465427 - L1MA4 LINE L1 -5150 1332 1160 2066 137 0 10 chr10 78123861 78124160 -67465128 - AluSx SINE Alu -16 296 1 8701 204 53 17 chr10 78124160 78124725 -67464563 - L1MA4 LINE L1 -5322 1160 144 1229 122 0 15 chr10 78124726 78124923 -67464365 + L1PA8 LINE L1 5978 6171 -1 420 227 62 107 chr10 78124940 78125035 -67464253 + L1MEc LINE L1 1545 1643 -4753 3711 68 19 2 chr10 78125035 78125518 -67463770 + L1PA7 LINE L1 5656 6146 -8 420 227 62 107 chr10 78125518 78125713 -67463575 + L1MEc LINE L1 1643 1822 -4574 288 282 43 88 chr10 78125865 78126330 -67462958 + L1MEc LINE L1 1731 2174 -4222 1313 183 30 12 chr10 78126352 78126680 -67462608 + L1MEc LINE L1 2792 3125 -3090 1425 145 21 25 chr10 78126695 78126977 -67462311 + L1MB8 LINE L1 5896 6176 -2 656 225 16 0 chr10 78126993 78127122 -67462166 + FLAM_A SINE Alu 1 131 -2 760 249 102 45 chr10 78127145 78127429 -67461859 + HsTC2b DNA Tc2 6 313 -1582 1739 162 28 17 chr10 78127429 78127719 -67461569 + AluJo SINE Alu 1 293 -19 760 249 102 45 chr10 78127719 78127767 -67461521 + HsTC2b DNA Tc2 313 357 -558 344 213 125 19 chr10 78127777 78127937 -67461351 + HsTC2b DNA Tc2 739 915 -3 260 298 30 69 chr10 78128722 78128853 -67460435 - MIR SINE MIR -88 174 49 777 186 0 0 chr10 78128927 78129051 -67460237 + FLAM_C SINE Alu 1 124 -19 236 75 0 25 chr10 78129051 78129091 -67460197 + (TTAAA)n Simple_repeat Simple_repeat 3 41 0 336 215 112 0 chr10 78129503 78129610 -67459678 + L1ME1 LINE L1 6009 6127 -39 1682 165 25 38 chr10 78130407 78130722 -67458566 + AluJo SINE Alu 1 311 -1 1794 175 26 3 chr10 78130758 78131061 -67458227 - AluJo SINE Alu 0 312 3 867 144 8 0 chr10 78131473 78131605 -67457683 - FLAM_C SINE Alu 0 133 1 226 333 103 43 chr10 78132787 78133021 -67456267 + L2 LINE L2 2606 2853 -461 296 301 23 74 chr10 78133079 78133255 -67456033 + L2 LINE L2 2910 3076 -196 1462 213 48 48 chr10 78133277 78133732 -67455556 + MLT1D LTR MaLR 1 455 -50 353 314 107 0 chr10 78133794 78133915 -67455373 + L2 LINE L2 3117 3250 -22 923 147 22 56 chr10 78134210 78134442 -67454846 - L1 LINE L1 -2511 3635 3412 1153 126 72 5 chr10 78134644 78134851 -67454437 + L1PB3 LINE L1 5911 6131 -23 236 89 44 0 chr10 78134869 78134914 -67454374 + L1PB3 LINE L1 6108 6154 0 486 222 48 40 chr10 78135409 78135535 -67453753 + MIR3 SINE MIR 72 198 -10 281 290 189 69 chr10 78135608 78135723 -67453565 + MIR SINE MIR 10 110 -152 1646 164 3 72 chr10 78135723 78136041 -67453247 + AluJo SINE Alu 1 296 -16 281 290 189 69 chr10 78136041 78136142 -67453146 + MIR SINE MIR 110 252 -10 1726 192 0 20 chr10 78136224 78136526 -67452762 + AluJo SINE Alu 1 296 -16 1157 179 75 85 chr10 78136568 78136943 -67452345 - MLT1A2 LTR MaLR 0 374 4 1705 189 73 32 chr10 78137049 78137488 -67451800 + LTR2B LTR ERV1 34 490 0 339 157 41 39 chr10 78138149 78138234 -67451054 + MER34C LTR ERV1 34 101 -484 546 214 10 0 chr10 78138239 78138337 -67450951 + FLAM_A SINE Alu 3 101 -41 1152 208 71 25 chr10 78138455 78138821 -67450467 + MER34B LTR ERV1 183 565 0 652 234 37 5 chr10 78139266 78139454 -67449834 + LTR33A LTR ERVL 328 521 -2 696 224 0 8 chr10 78139549 78139683 -67449605 - FLAM_A SINE Alu 0 133 1 728 160 8 0 chr10 78140302 78140421 -67448867 + AluJo/FLAM SINE Alu 14 133 -179 1770 158 3 35 chr10 78140424 78140735 -67448553 + AluJo SINE Alu 1 301 -11 708 221 55 68 chr10 78140986 78141127 -67448161 - MIR SINE MIR -30 232 94 2130 126 7 0 chr10 78141127 78141428 -67447860 + AluSq SINE Alu 1 303 -10 708 221 55 68 chr10 78141428 78141521 -67447767 - MIR SINE MIR -168 94 1 216 253 0 36 chr10 78141531 78141591 -67447697 - MIR SINE MIR -105 103 45 473 186 31 0 chr10 78141728 78141825 -67447463 - AluJb SINE Alu -10 302 203 653 138 0 0 chr10 78141825 78141919 -67447369 + AluSq/x SINE Alu 15 108 -205 1099 187 21 0 chr10 78141919 78142106 -67447182 - AluJb SINE Alu -121 191 1 180 410 12 12 chr10 78142146 78142229 -67447059 + MIR SINE MIR 16 98 -110 284 300 71 0 chr10 78142300 78142370 -67446918 + MER91A DNA MER1_type 24 98 -98 216 291 36 0 chr10 78142470 78142525 -67446763 + MER91A DNA MER1_type 134 190 0 479 212 54 138 chr10 78142556 78142673 -67446615 + MIR SINE MIR 75 169 -93 1778 175 3 23 chr10 78142673 78142982 -67446306 - AluJb SINE Alu -9 303 1 479 212 54 138 chr10 78142982 78143067 -67446221 + MIR SINE MIR 169 260 -2 198 232 80 80 chr10 78143073 78143185 -67446103 + MIR SINE MIR 105 216 -46 900 114 0 23 chr10 78144183 78144315 -67444973 + AluSq/x SINE Alu 5 133 -179 2238 107 0 0 chr10 78144436 78144736 -67444552 + AluY SINE Alu 1 300 -11 2251 119 0 7 chr10 78144923 78145233 -67444055 + AluSx SINE Alu 5 312 0 2274 119 0 7 chr10 78145272 78145582 -67443706 + AluSx SINE Alu 1 308 -4 910 226 39 66 chr10 78145597 78145929 -67443359 + L1ME1 LINE L1 5822 6144 -22 21 0 0 0 chr10 78146201 78146222 -67443066 + AT_rich Low_complexity Low_complexity 1 21 0 2080 98 0 67 chr10 78146490 78146805 -67442483 + AluSx SINE Alu 1 294 -18 474 204 45 30 chr10 78146835 78146967 -67442321 - MER94 DNA DNA 0 134 1 1476 171 0 81 chr10 78147276 78147585 -67441703 - AluJb SINE Alu -18 294 11 829 173 0 0 chr10 78147913 78148040 -67441248 - FLAM_C SINE Alu -16 127 1 763 178 153 43 chr10 78148150 78148228 -67441060 + MER33 DNA MER1_type 1 69 -2516 2312 78 3 0 chr10 78148228 78148522 -67440766 + AluSx SINE Alu 1 295 -17 763 178 153 43 chr10 78148522 78148724 -67440564 + MER33 DNA MER1_type 69 312 -12 1435 163 69 45 chr10 78148736 78149025 -67440263 - AluJo SINE Alu -16 296 1 250 170 0 21 chr10 78150425 78150472 -67438816 + L2 LINE L2 3268 3313 0 753 168 7 0 chr10 78150593 78150742 -67438546 + L1MB3 LINE L1 6034 6183 0 204 260 0 26 chr10 78150831 78150908 -67438380 + (TATAA)n Simple_repeat Simple_repeat 5 79 0 2149 112 3 3 chr10 78151046 78151340 -67437948 + AluSq SINE Alu 1 294 -19 182 31 0 62 chr10 78151609 78151641 -67437647 + (CAAAAA)n Simple_repeat Simple_repeat 2 31 0 1031 115 0 0 chr10 78151941 78152080 -67437208 - AluSg/x SINE Alu -26 284 146 268 167 28 0 chr10 78152491 78152563 -67436725 + (TA)n Simple_repeat Simple_repeat 1 74 0 295 250 0 0 chr10 78153019 78153075 -67436213 + L2 LINE L2 3257 3312 -1 2162 121 0 13 chr10 78153142 78153448 -67435840 - AluSx SINE Alu -10 302 1 236 175 16 0 chr10 78153517 78153580 -67435708 + CT-rich Low_complexity Low_complexity 1 64 0 1590 180 50 32 chr10 78154211 78154523 -67434765 - MER7A DNA MER2_type -2692 346 27 2454 59 16 0 chr10 78154523 78154828 -67434460 - AluY SINE Alu -1 310 1 1590 180 50 32 chr10 78154828 78154855 -67434433 - MER7A DNA MER2_type -3011 27 2 2325 99 0 3 chr10 78155175 78155487 -67433801 + AluSx SINE Alu 2 312 0 224 230 0 40 chr10 78155927 78156001 -67433287 + A-rich Low_complexity Low_complexity 3 73 0 2137 89 11 4 chr10 78156182 78156463 -67432825 - AluSc SINE Alu -15 294 12 29 0 0 0 chr10 78156636 78156665 -67432623 + AT_rich Low_complexity Low_complexity 1 29 0 974 73 0 0 chr10 78156751 78156875 -67432413 - AluSg/x SINE Alu -8 302 179 4228 147 54 59 chr10 78156902 78158243 -67431045 - L1MA10 LINE L1 -100 6234 4901 180 286 0 0 chr10 78158272 78158321 -67430967 + L2 LINE L2 3263 3311 -2 2413 95 0 0 chr10 78158420 78158725 -67430563 - AluSq SINE Alu -8 305 1 2343 83 0 22 chr10 78160249 78160561 -67428727 - AluSq SINE Alu -8 305 1 824 152 0 8 chr10 78160938 78161063 -67428225 + FLAM_A SINE Alu 1 124 -9 2320 70 0 0 chr10 78161091 78161414 -67427874 + AluY SINE Alu 1 311 0 2251 206 25 32 chr10 78161701 78161796 -67427492 - L1 LINE L1 -751 5395 5301 2219 114 0 0 chr10 78161796 78162085 -67427203 - AluSq SINE Alu -24 289 1 2251 206 25 32 chr10 78162085 78162582 -67426706 - L1 LINE L1 -845 5301 4807 2319 92 10 0 chr10 78162826 78163120 -67426168 - AluSx SINE Alu -15 297 1 2059 148 3 0 chr10 78163305 78163616 -67425672 + AluJb SINE Alu 1 312 0 222 271 0 0 chr10 78163628 78163676 -67425612 - L2 LINE L2 -24 3289 3242 314 329 145 13 chr10 78163769 78164003 -67425285 - L2 LINE L2 -404 2910 2646 919 120 0 23 chr10 78164150 78164283 -67425005 + FRAM SINE Alu 29 158 -18 273 253 175 24 chr10 78164421 78164616 -67424672 + L1MC4 LINE L1 6756 7000 -1002 24 0 0 0 chr10 78165168 78165192 -67424096 + AT_rich Low_complexity Low_complexity 1 24 0 21 71 0 0 chr10 78165469 78165511 -67423777 + AT_rich Low_complexity Low_complexity 1 42 0 2400 94 0 22 chr10 78165624 78165943 -67423345 + AluSx SINE Alu 1 312 0 1880 116 101 0 chr10 78165947 78166224 -67423064 + AluSg SINE Alu 3 307 -3 2520 127 67 20 chr10 78166403 78166805 -67422483 + MSTC LTR MaLR 4 424 -4 699 100 0 10 chr10 78168282 78168382 -67420906 + HY3 scRNA scRNA 1 99 -2 234 0 0 0 chr10 78168382 78168408 -67420880 + (A)n Simple_repeat Simple_repeat 1 26 0 1965 148 3 17 chr10 78168408 78168705 -67420583 + AluSx SINE Alu 1 293 -19 342 202 79 18 chr10 78168736 78168850 -67420438 - L1ME4a LINE L1 -23 6098 5978 2305 99 0 7 chr10 78168969 78169271 -67420017 + AluSq SINE Alu 1 300 -13 2112 92 17 3 chr10 78169271 78169566 -67419722 + AluSp SINE Alu 1 299 -14 1753 175 17 10 chr10 78169589 78169886 -67419402 + AluJo SINE Alu 1 299 -13 639 249 6 30 chr10 78170139 78170304 -67418984 + FAM SINE Alu 5 165 -10 359 284 118 0 chr10 78170366 78170535 -67418753 - L1MEd LINE L1 -4931 1188 1000 2923 224 58 18 chr10 78170741 78171549 -67417739 - L1ME2 LINE L1 -11 6222 5448 207 0 0 0 chr10 78171549 78171572 -67417716 + (TTAA)n Simple_repeat Simple_repeat 1 23 0 634 234 0 8 chr10 78171572 78171696 -67417592 - FLAM_C SINE Alu -10 123 1 2923 224 58 18 chr10 78171696 78171801 -67417487 - L1ME2 LINE L1 -784 5449 5262 537 16 0 0 chr10 78171801 78171863 -67417425 + (TTCC)n Simple_repeat Simple_repeat 1 62 0 1604 93 0 22 chr10 78171863 78172089 -67417199 - AluSg/x SINE Alu -10 299 79 4429 196 62 79 chr10 78172090 78172505 -67416783 - L1ME2 LINE L1 -947 5268 4847 2223 122 0 0 chr10 78172505 78172809 -67416479 - AluSx SINE Alu -8 304 1 4429 196 62 79 chr10 78172809 78172871 -67416417 - L1ME2 LINE L1 -1368 4847 4785 2406 58 3 0 chr10 78172871 78173162 -67416126 - AluSp SINE Alu -21 292 1 4429 196 62 79 chr10 78173162 78173564 -67415724 - L1ME2 LINE L1 -1430 4785 4378 2099 128 31 5 chr10 78173564 78173947 -67415341 - L1MB7 LINE L1 -19 6165 5773 4429 196 62 79 chr10 78173947 78174740 -67414548 - L1ME2 LINE L1 -1837 4378 3623 344 228 8 71 chr10 78174744 78174871 -67414417 - L1M4 LINE L1 -1806 5151 5033 3112 200 121 50 chr10 78174874 78175045 -67414243 - L1M4 LINE L1 -2467 4490 4333 1841 168 17 0 chr10 78175045 78175343 -67413945 - AluJb SINE Alu -9 303 1 3112 200 121 50 chr10 78175343 78176416 -67412872 - L1M4 LINE L1 -2624 4333 3157 382 270 54 27 chr10 78176809 78176994 -67412294 - L1M4 LINE L1 -6659 200 11 343 271 143 25 chr10 78177003 78177206 -67412082 - L1M4 LINE L1 -2448 3698 3472 268 227 82 0 chr10 78177380 78177477 -67411811 - L1ME2 LINE L1 -4519 1877 1773 1015 231 127 28 chr10 78177701 78178098 -67411190 - MLT1G LTR MaLR 0 590 126 2157 127 10 0 chr10 78178099 78178399 -67410889 + AluSq SINE Alu 1 303 -10 3983 205 25 15 chr10 78178399 78179302 -67409986 + L1 LINE L1 2180 3094 -3052 2368 86 0 10 chr10 78179302 78179604 -67409684 + AluY SINE Alu 1 299 -12 3983 205 25 15 chr10 78179604 78179671 -67409617 + L1 LINE L1 3094 3159 -2987 1351 77 14 18 chr10 78179672 78179892 -67409396 + L1MA1 LINE L1 5979 6197 -105 642 255 116 88 chr10 78180155 78180653 -67408635 + L2 LINE L2 2756 3312 -1 1425 143 132 0 chr10 78180922 78181194 -67408094 + AluJo SINE Alu 1 308 -4 2386 101 0 0 chr10 78181348 78181655 -67407633 + AluSc SINE Alu 1 307 -2 22 0 0 0 chr10 78181732 78181754 -67407534 + AT_rich Low_complexity Low_complexity 1 22 0 447 250 132 28 chr10 78181754 78181966 -67407322 - L1ME4a LINE L1 -46 6075 5842 2341 79 10 0 chr10 78182098 78182401 -67406887 - AluSp SINE Alu -7 306 1 1973 150 3 3 chr10 78183026 78183319 -67405969 - AluSx SINE Alu -19 293 1 2006 148 0 29 chr10 78183388 78183556 -67405732 - AluSx SINE Alu -11 301 145 2273 107 3 0 chr10 78183556 78183866 -67405422 - AluSx SINE Alu -1 311 1 2006 148 0 29 chr10 78183866 78184007 -67405281 - AluSx SINE Alu -167 145 1 529 257 186 44 chr10 78184113 78184206 -67405082 - MIR SINE MIR -4 258 180 3693 103 23 13 chr10 78184206 78184728 -67404560 + MER1A DNA MER1_type 1 527 0 529 257 186 44 chr10 78184728 78184860 -67404428 - MIR SINE MIR -82 180 1 2546 61 0 3 chr10 78184913 78185224 -67404064 - AluY SINE Alu -1 310 1 1401 185 4 43 chr10 78185233 78185509 -67403779 - AluJb SINE Alu -21 291 27 267 54 0 0 chr10 78185531 78185568 -67403720 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 679 138 255 0 chr10 78186025 78186213 -67403075 + MER33 DNA MER1_type 1 236 -88 2068 177 52 19 chr10 78186213 78186677 -67402611 + L1MD2 LINE L1 5420 5898 -461 1321 96 24 10 chr10 78186695 78186903 -67402385 + Tigger2 DNA MER2_type 1 211 -2507 855 137 8 0 chr10 78186912 78187043 -67402245 + Tigger2 DNA MER2_type 2573 2704 -14 1123 213 70 60 chr10 78187062 78187462 -67401826 + L1MD2 LINE L1 5941 6344 -15 1703 166 3 51 chr10 78187477 78187790 -67401498 - AluJo SINE Alu -14 298 1 360 163 116 0 chr10 78187790 78187876 -67401412 + MER33 DNA MER1_type 229 324 0 394 232 18 18 chr10 78187999 78188111 -67401177 + MER103 DNA DNA 4 115 -51 558 254 44 9 chr10 78188111 78188225 -67401063 - MIR SINE MIR -114 148 31 248 323 21 0 chr10 78188536 78188632 -67400656 + L1MC4 LINE L1 7779 7876 -166 2601 62 0 0 chr10 78188684 78188990 -67400298 + AluY SINE Alu 1 306 -5 273 151 170 38 chr10 78189001 78189107 -67400181 + L1MC5 LINE L1 7806 7925 -36 1627 135 117 4 chr10 78189373 78189647 -67399641 + AluSg SINE Alu 1 305 -5 276 353 113 23 chr10 78190031 78190085 -67399203 - MIR SINE MIR -12 250 202 1936 120 4 4 chr10 78190085 78190375 -67398913 - AluSx SINE Alu 0 305 16 276 353 113 23 chr10 78190375 78190540 -67398748 - MIR SINE MIR -60 202 10 202 98 98 0 chr10 78190548 78190599 -67398689 + (TTAA)n Simple_repeat Simple_repeat 2 57 0 24 0 0 0 chr10 78190643 78190667 -67398621 + AT_rich Low_complexity Low_complexity 1 24 0 283 314 164 14 chr10 78190707 78190847 -67398441 + MIR SINE MIR 28 188 -74 1609 159 44 34 chr10 78190857 78191152 -67398136 + AluJo SINE Alu 1 298 -14 2033 95 0 34 chr10 78191255 78191579 -67397709 - AluSq SINE Alu 0 314 1 555 291 61 19 chr10 78191682 78191895 -67397393 + MIR SINE MIR 2 223 -39 21 0 0 0 chr10 78192178 78192199 -67397089 + GC_rich Low_complexity Low_complexity 1 21 0 288 0 0 0 chr10 78192270 78192302 -67396986 + (TCC)n Simple_repeat Simple_repeat 2 33 0 325 261 176 24 chr10 78192776 78192941 -67396347 + MIR3 SINE MIR 17 206 -2 5951 118 30 41 chr10 78193243 78194985 -67394303 + L1MA3 LINE L1 4583 6305 0 2252 86 0 0 chr10 78194992 78195271 -67394017 + AluSg SINE Alu 32 310 0 327 310 78 0 chr10 78195452 78195581 -67393707 - MIR3 SINE MIR -9 199 61 281 191 67 105 chr10 78195720 78195858 -67393430 - MER113 DNA MER1_type? -308 213 84 1734 170 0 27 chr10 78195858 78196152 -67393136 + AluJb SINE Alu 19 304 -8 281 191 67 105 chr10 78196152 78196223 -67393065 - MER113 DNA MER1_type? -437 84 12 2164 120 0 49 chr10 78196232 78196557 -67392731 - AluSx SINE Alu -3 309 1 2248 169 11 0 chr10 78197470 78197830 -67391458 - LTR57 LTR ERVL -47 364 1 586 354 129 13 chr10 78198130 78198526 -67390762 + L2 LINE L2 2339 2780 -534 3591 203 105 9 chr10 78198680 78199631 -67389657 - L1 LINE L1 -2261 3885 2844 256 250 7 96 chr10 78199651 78199787 -67389501 + L2 LINE L2 2867 2990 -282 2289 86 7 20 chr10 78200312 78200613 -67388675 - AluSx SINE Alu -15 297 1 252 0 0 0 chr10 78200630 78200658 -67388630 + (TA)n Simple_repeat Simple_repeat 2 29 0 2304 95 0 0 chr10 78200658 78200953 -67388335 - AluSc SINE Alu -14 295 1 492 94 82 94 chr10 78201026 78201111 -67388177 - MER58B DNA MER1_type -8 333 124 1078 200 15 0 chr10 78201250 78201445 -67387843 + AluJb SINE Alu 64 261 -51 1383 208 43 68 chr10 78201451 78201893 -67387395 - L1ME1 LINE L1 -138 6028 5598 289 210 32 0 chr10 78201885 78201947 -67387341 - L1ME1 LINE L1 -917 5229 5166 * 1741 221 76 0 chr10 78201973 78202593 -67386695 + L1ME LINE L1 4246 4948 -1198 272 311 48 0 chr10 78202805 78202908 -67386380 - LTR52 LTR ERVL -200 221 114 711 192 62 7 chr10 78202927 78203073 -67386215 - LTR52 LTR ERVL -265 156 3 231 304 0 0 chr10 78203073 78203129 -67386159 + L1ME LINE L1 4950 5005 -1141 757 152 24 24 chr10 78203129 78203254 -67386034 + FLAM_C SINE Alu 2 126 -17 1117 218 44 7 chr10 78203256 78203527 -67385761 + L1ME LINE L1 5000 5280 -866 903 108 0 31 chr10 78203529 78203658 -67385630 + FLAM_C SINE Alu 1 125 -18 1379 217 15 74 chr10 78203660 78203755 -67385533 + L1ME LINE L1 5301 5400 -766 2168 126 10 0 chr10 78203755 78204056 -67385232 + AluSx SINE Alu 1 304 -8 1379 217 15 74 chr10 78204056 78204352 -67384936 + L1ME LINE L1 5400 5669 -497 1706 128 4 15 chr10 78204362 78204636 -67384652 - AluSg SINE Alu -4 306 36 1211 156 78 5 chr10 78205233 78205451 -67383837 - MER46A DNA MER2_type -1 235 2 2084 117 37 0 chr10 78205569 78205869 -67383419 - AluSx SINE Alu -1 311 1 1453 132 5 0 chr10 78205931 78206144 -67383144 + AluJb SINE Alu 1 214 -98 635 101 0 0 chr10 78206144 78206223 -67383065 + AluSq/x SINE Alu 39 117 -196 524 150 12 0 chr10 78206223 78206303 -67382985 + AluJ/FRAM SINE Alu 216 296 -16 2225 102 0 10 chr10 78206401 78206694 -67382594 - AluSx SINE Alu -22 290 1 369 75 38 0 chr10 78206700 78206753 -67382535 + L1MB7 LINE L1 6130 6184 0 473 269 70 56 chr10 78207084 78207719 -67381569 + L1MC4a LINE L1 4795 5450 -757 8058 29 0 1 chr10 78207784 78209412 -67379876 - L1PA4 LINE L1 0 6155 4530 1167 294 75 14 chr10 78209414 78209563 -67379725 + L1MC4a LINE L1 5437 5575 -2233 2125 136 46 129 chr10 78209563 78210019 -67379269 - MER47B DNA MER2_type 0 418 1 1167 294 75 14 chr10 78210019 78210311 -67378977 + L1MC4a LINE L1 5575 5905 -1903 333 294 58 44 chr10 78211304 78211617 -67377671 + L1ME LINE L1 5283 5610 -564 2293 104 0 7 chr10 78211760 78212058 -67377230 - AluSq SINE Alu -17 296 1 1554 169 14 32 chr10 78212084 78212368 -67376920 - AluJo SINE Alu -33 279 1 807 171 8 8 chr10 78212540 78212669 -67376619 - FLAM_C SINE Alu -4 129 1 200 263 316 44 chr10 78212744 78212858 -67376430 - MIR3 SINE MIR -28 180 36 456 114 318 0 chr10 78213118 78213206 -67376082 - AluSg/x SINE Alu -2 308 193 * 476 163 0 0 chr10 78213201 78213281 -67376007 + AluJ/FRAM SINE Alu 232 311 -1 2123 119 10 0 chr10 78213695 78213989 -67375299 + AluSg SINE Alu 1 297 -13 766 214 15 0 chr10 78213994 78214125 -67375163 + FLAM_A SINE Alu 1 133 0 21 0 0 0 chr10 78214377 78214398 -67374890 + AT_rich Low_complexity Low_complexity 1 21 0 2373 102 0 0 chr10 78215112 78215416 -67373872 + AluSg SINE Alu 1 304 -6 2536 60 0 3 chr10 78216184 78216484 -67372804 - AluY SINE Alu -12 299 1 33 25 0 0 chr10 78216767 78216807 -67372481 + AT_rich Low_complexity Low_complexity 1 40 0 297 0 0 0 chr10 78216990 78217023 -67372265 + (TAA)n Simple_repeat Simple_repeat 2 34 0 285 213 0 0 chr10 78217615 78217662 -67371626 + MER4D LTR ERV1 791 837 -66 413 264 170 31 chr10 78218106 78218197 -67371091 - MER5A DNA MER1_type 0 189 112 2136 114 0 10 chr10 78218197 78218541 -67370747 - AluSx SINE Alu 0 312 1 413 264 170 31 chr10 78218541 78218608 -67370680 - MER5A DNA MER1_type -77 112 9 427 192 144 0 chr10 78219788 78219892 -67369396 - L1ME3 LINE L1 0 6162 6044 1373 134 99 0 chr10 78219904 78220136 -67369152 - L1MB7 LINE L1 -6 6178 5924 1283 90 0 0 chr10 78220552 78220718 -67368570 + AluSq SINE Alu 137 302 -11 37 23 0 0 chr10 78220837 78220881 -67368407 + AT_rich Low_complexity Low_complexity 1 44 0 21 36 0 0 chr10 78221035 78221063 -67368225 + AT_rich Low_complexity Low_complexity 1 28 0 203 229 0 0 chr10 78223467 78223502 -67365786 + (TG)n Simple_repeat Simple_repeat 2 36 0 2405 68 0 3 chr10 78223503 78223797 -67365491 - AluY SINE Alu -18 293 1 300 283 17 33 chr10 78223840 78223960 -67365328 + L1ME4a LINE L1 5959 6076 -45 2289 94 3 7 chr10 78223985 78224282 -67365006 - AluSq SINE Alu -17 296 1 1715 131 86 4 chr10 78225621 78225888 -67363400 - AluSq SINE Alu -24 289 1 21 0 0 0 chr10 78225983 78226004 -67363284 + AT_rich Low_complexity Low_complexity 1 21 0 2016 124 3 0 chr10 78226100 78226404 -67362884 - AluSg SINE Alu 0 305 1 1095 103 0 0 chr10 78226405 78226541 -67362747 - AluSq/x SINE Alu -177 136 1 262 233 44 33 chr10 78227436 78227526 -67361762 + L1MC5 LINE L1 7837 7927 -34 1834 174 0 7 chr10 78227528 78227822 -67361466 + AluJb SINE Alu 12 303 -9 234 0 0 0 chr10 78227825 78227851 -67361437 + (TA)n Simple_repeat Simple_repeat 1 26 0 21 36 0 0 chr10 78228593 78228621 -67360667 + AT_rich Low_complexity Low_complexity 1 28 0 867 127 85 67 chr10 78229401 78229566 -67359722 + FAM SINE Alu 1 168 -7 1979 89 19 0 chr10 78229577 78229834 -67359454 + AluSq SINE Alu 34 295 -18 382 193 64 93 chr10 78229845 78229985 -67359303 + MER5A DNA MER1_type 53 188 -1 2494 69 3 0 chr10 78230303 78230606 -67358682 + AluSp SINE Alu 1 304 -9 1842 156 9 34 chr10 78230621 78230941 -67358347 + AluJo SINE Alu 1 312 0 359 306 104 0 chr10 78231446 78231580 -67357708 + MIR3 SINE MIR 60 207 -1 991 151 17 17 chr10 78231697 78231869 -67357419 + AluJo SINE Alu 54 225 -87 996 132 7 7 chr10 78232259 78232411 -67356877 - AluJo SINE Alu -160 152 1 2430 54 3 3 chr10 78232549 78232846 -67356442 - AluY SINE Alu -14 297 1 999 184 102 0 chr10 78232919 78233115 -67356173 - MER58A DNA MER1_type -8 216 1 320 292 139 0 chr10 78233705 78233842 -67355446 + L2 LINE L2 3150 3305 -8 2434 84 0 0 chr10 78234158 78234456 -67354832 + AluSg SINE Alu 1 298 -12 807 151 0 0 chr10 78234503 78234629 -67354659 - AluSg/x SINE Alu -3 309 184 1451 161 0 39 chr10 78234743 78235003 -67354285 - AluJo SINE Alu -6 306 57 339 281 38 81 chr10 78235004 78235164 -67354124 + MIR SINE MIR 94 246 -16 345 217 76 135 chr10 78235419 78235609 -67353679 + MIR SINE MIR 2 180 -67 2305 112 0 0 chr10 78235691 78235994 -67353294 - AluSx SINE Alu -9 303 1 2540 54 0 0 chr10 78237641 78237939 -67351349 + AluY SINE Alu 1 298 -13 196 216 0 149 chr10 78239311 78239385 -67349903 - L2 LINE L2 -31 3241 3179 293 273 10 10 chr10 78239413 78239512 -67349776 + L1ME LINE L1 5721 5819 -302 797 193 33 40 chr10 78239519 78239669 -67349619 + AluJo SINE Alu 2 150 -162 2152 137 0 0 chr10 78240538 78240837 -67348451 - AluSx SINE Alu -13 299 1 891 201 5 64 chr10 78240864 78241021 -67348267 + AluJo SINE Alu 121 265 -47 2410 85 0 3 chr10 78241021 78241328 -67347960 - AluY SINE Alu -5 306 1 891 201 5 64 chr10 78241328 78241374 -67347914 + AluJo SINE Alu 265 312 0 1513 101 0 0 chr10 78242589 78242788 -67346500 - AluSq SINE Alu -6 307 109 2017 76 0 60 chr10 78243927 78244229 -67345059 + AluY SINE Alu 12 295 -16 239 260 200 40 chr10 78244361 78244511 -67344777 + MIR SINE MIR 30 203 -59 2132 119 0 7 chr10 78245398 78245701 -67343587 + AluSq SINE Alu 1 301 -12 1946 141 7 0 chr10 78245868 78246167 -67343121 + AluSx SINE Alu 1 301 -11 246 32 0 0 chr10 78247642 78247673 -67341615 + (TG)n Simple_repeat Simple_repeat 1 31 0 1188 167 129 91 chr10 78250185 78250354 -67338934 - AluJo SINE Alu -4 298 112 2297 99 0 0 chr10 78250354 78250658 -67338630 + AluSg SINE Alu 1 304 -6 1188 167 129 91 chr10 78250658 78250775 -67338513 - AluJo SINE Alu -190 112 1 427 149 27 0 chr10 78250874 78250948 -67338340 + U3 snRNA snRNA 1 76 -141 218 299 15 15 chr10 78251130 78251197 -67338091 + L2 LINE L2 3182 3248 -24 2065 128 0 3 chr10 78251600 78251890 -67337398 - AluSx SINE Alu -23 289 1 2510 72 0 7 chr10 78251899 78252206 -67337082 - AluSg SINE Alu -5 305 1 1335 218 6 47 chr10 78252235 78252552 -67336736 - AluJo SINE Alu -7 305 2 2090 111 0 0 chr10 78252998 78253277 -67336011 - AluSx SINE Alu -33 279 1 1915 169 3 0 chr10 78253278 78253573 -67335715 - AluJo SINE Alu -14 298 3 480 108 27 0 chr10 78253698 78253772 -67335516 + AluS SINE Alu 2 77 -236 243 0 0 0 chr10 78254326 78254353 -67334935 + (A)n Simple_repeat Simple_repeat 1 27 0 2198 100 0 10 chr10 78254623 78254924 -67334364 + AluSc SINE Alu 3 300 -9 862 171 59 13 chr10 78255874 78256026 -67333262 - FRAM SINE Alu -17 159 1 192 255 59 0 chr10 78256292 78256343 -67332945 - L2 LINE L2 -6 3266 3213 768 199 0 8 chr10 78256925 78257056 -67332232 + FLAM_A SINE Alu 2 131 -2 355 302 39 16 chr10 78257064 78257193 -67332095 - MIR3 SINE MIR -31 177 46 378 0 0 0 chr10 78257247 78257289 -67331999 + (CA)n Simple_repeat Simple_repeat 2 43 0 2024 137 3 0 chr10 78257398 78257697 -67331591 + AluSx SINE Alu 1 300 -12 2317 99 7 0 chr10 78257768 78258061 -67331227 + AluSx SINE Alu 3 297 -15 2408 81 3 0 chr10 78258061 78258358 -67330930 + AluSc SINE Alu 1 298 -11 24 32 0 0 chr10 78258754 78258785 -67330503 + AT_rich Low_complexity Low_complexity 1 31 0 2100 111 0 20 chr10 78258904 78259064 -67330224 - AluSx SINE Alu -21 291 138 2261 101 3 3 chr10 78259064 78259360 -67329928 - AluSp SINE Alu -17 296 1 2100 111 0 20 chr10 78259360 78259496 -67329792 - AluSx SINE Alu -174 138 1 32 0 0 0 chr10 78259609 78259641 -67329647 + AT_rich Low_complexity Low_complexity 1 32 0 545 72 0 60 chr10 78259642 78259725 -67329563 + L1PA8 LINE L1 6090 6167 -5 1613 171 3 41 chr10 78259733 78259877 -67329411 + AluJo SINE Alu 1 130 -182 2459 80 0 19 chr10 78259877 78260191 -67329097 + AluSg SINE Alu 1 308 -2 1613 171 3 41 chr10 78260191 78260339 -67328949 + AluJo SINE Alu 130 282 -30 32 0 0 0 chr10 78260347 78260379 -67328909 + AT_rich Low_complexity Low_complexity 1 32 0 420 204 199 71 chr10 78260837 78260959 -67328329 - MER112 DNA MER1_type -6 254 149 1758 133 66 11 chr10 78260959 78261273 -67328015 - AluSx SINE Alu 0 312 1 420 204 199 71 chr10 78261273 78261361 -67327927 - MER112 DNA MER1_type -111 149 17 330 263 32 21 chr10 78261443 78261538 -67327750 + MIR SINE MIR 11 106 -156 552 255 27 13 chr10 78261543 78261692 -67327596 + MIR SINE MIR 68 218 -44 2270 98 7 7 chr10 78261894 78262200 -67327088 - AluSq SINE Alu -7 306 1 199 304 148 44 chr10 78262311 78262446 -67326842 + L2 LINE L2 3158 3306 -7 229 287 186 8 chr10 78262450 78262579 -67326709 + MIR SINE MIR 96 247 -15 2041 124 3 37 chr10 78262615 78262938 -67326350 - AluSx SINE Alu 0 312 1 369 0 0 0 chr10 78263490 78263531 -67325757 + (TG)n Simple_repeat Simple_repeat 2 42 0 2149 98 0 0 chr10 78263532 78263807 -67325481 - AluSg SINE Alu -35 275 1 774 164 7 57 chr10 78263894 78264034 -67325254 - FLAM_A SINE Alu 0 133 1 2150 103 3 7 chr10 78264096 78264388 -67324900 - AluSp SINE Alu -22 291 1 995 221 6 0 chr10 78265601 78265782 -67323506 + MER58A DNA MER1_type 42 223 -1 242 253 24 12 chr10 78265992 78266075 -67323213 + CT-rich Low_complexity Low_complexity 4 87 0 1579 166 42 11 chr10 78266144 78266428 -67322860 + AluJo SINE Alu 1 293 -19 240 283 123 47 chr10 78266482 78266588 -67322700 - MIR SINE MIR -79 129 16 209 200 0 0 chr10 78266650 78266685 -67322603 + polypyrimidine Low_complexity Low_complexity 2 36 0 2317 94 3 0 chr10 78266803 78267101 -67322187 - AluSx SINE Alu -13 299 1 200 176 0 0 chr10 78267282 78267316 -67321972 + (TG)n Simple_repeat Simple_repeat 2 35 0 1405 125 26 0 chr10 78267411 78267643 -67321645 - L1MC3 LINE L1 -1 7784 7547 2141 224 51 27 chr10 78268065 78268644 -67320644 + L1ME3A LINE L1 5523 6117 -53 1077 113 28 0 chr10 78269257 78269434 -67319854 - L1MA2 LINE L1 -109 6195 6014 183 80 0 0 chr10 78269439 78269464 -67319824 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 972 192 61 33 chr10 78269494 78269708 -67319580 - AluJo SINE Alu -92 220 1 407 259 139 74 chr10 78269729 78269949 -67319339 - MIR SINE MIR -19 243 14 185 283 151 19 chr10 78270244 78270350 -67318938 + L2 LINE L2 3193 3312 -1 584 315 149 5 chr10 78270604 78270826 -67318462 + L2 LINE L2 2548 2801 -513 435 231 22 0 chr10 78270837 78270928 -67318360 + MER63 DNA MER1_type 27 745 -317 791 298 43 28 chr10 78270988 78271243 -67318045 + L2 LINE L2 2811 3069 -244 1212 94 6 0 chr10 78271726 78271886 -67317402 + AluSq SINE Alu 150 310 -3 189 107 0 0 chr10 78272049 78272077 -67317211 + (T)n Simple_repeat Simple_repeat 1 28 0 2457 86 0 0 chr10 78272457 78272759 -67316529 + AluY SINE Alu 1 302 -9 394 210 167 7 chr10 78272916 78273054 -67316234 - L1ME4a LINE L1 -1 6120 5961 442 278 114 15 chr10 78273612 78274015 -67315273 - L1ME4a LINE L1 -2016 5792 5255 261 322 11 23 chr10 78274078 78274165 -67315123 + Tigger8 DNA MER2_type 578 663 -3 335 312 18 9 chr10 78274260 78274369 -67314919 + L3 LINE CR1 1341 1450 -127 1438 189 0 68 chr10 78274502 78274674 -67314614 - AluJb SINE Alu -12 300 159 2308 88 0 3 chr10 78274674 78274968 -67314320 - AluY SINE Alu -18 293 1 1438 189 0 68 chr10 78274968 78275117 -67314171 - AluJb SINE Alu -153 159 1 2201 102 20 3 chr10 78275149 78275444 -67313844 + AluSq SINE Alu 1 300 -13 606 228 15 37 chr10 78275607 78275743 -67313545 - FLAM_A SINE Alu 0 133 1 270 0 0 0 chr10 78275801 78275831 -67313457 + (TG)n Simple_repeat Simple_repeat 2 31 0 456 307 67 67 chr10 78275865 78276165 -67313123 - L1MC4a LINE L1 -1910 5898 5599 374 194 19 68 chr10 78276173 78276276 -67313012 + Tigger4(Zombi) DNA MER2_type 2632 2729 -2 440 294 17 28 chr10 78277211 78277391 -67311897 - L2 LINE L2 -15 3298 3121 1440 306 45 40 chr10 78277391 78277921 -67311367 - LTR67 LTR ERVL -3 554 22 366 270 30 137 chr10 78277980 78278250 -67311038 - L2 LINE L2 -245 3068 2828 2173 121 0 16 chr10 78278727 78279033 -67310255 + AluSx SINE Alu 1 301 -11 986 166 22 17 chr10 78279270 78279451 -67309837 - MER20 DNA MER1_type -4 215 34 2111 135 0 6 chr10 78279494 78279805 -67309483 - AluSx SINE Alu -3 309 1 2181 79 76 7 chr10 78279842 78280133 -67309155 - AluSx SINE Alu -1 311 1 856 170 0 0 chr10 78280497 78280632 -67308656 - AluJb SINE Alu -177 135 1 609 192 88 16 chr10 78280647 78280772 -67308516 - AluSq/x SINE Alu -179 134 1 3681 175 90 28 chr10 78280973 78281828 -67307460 - L1MB7 LINE L1 0 6184 5277 473 286 33 17 chr10 78282566 78282712 -67306576 + MIR SINE MIR 6 160 -48 2281 107 0 0 chr10 78282721 78283021 -67306267 + AluSg SINE Alu 1 300 -10 533 127 0 13 chr10 78283031 78283110 -67306178 + FLAM_A SINE Alu 46 123 -19 357 281 67 0 chr10 78283115 78283204 -67306084 + MIR SINE MIR 161 255 -7 230 54 0 27 chr10 78283212 78283249 -67306039 + (TA)n Simple_repeat Simple_repeat 2 37 0 27 29 0 0 chr10 78283442 78283476 -67305812 + AT_rich Low_complexity Low_complexity 1 34 0 949 185 0 0 chr10 78283647 78283809 -67305479 + FRAM SINE Alu 4 165 -11 522 192 131 3 chr10 78283842 78284063 -67305225 + MER33 DNA MER1_type 19 324 0 1571 152 25 29 chr10 78284171 78284448 -67304840 - AluJb SINE Alu -23 289 14 1045 151 27 16 chr10 78284448 78284633 -67304655 + AluJb SINE Alu 111 297 -15 255 188 31 16 chr10 78284633 78284697 -67304591 - L1M3 LINE L1 -326 5854 5790 698 308 146 45 chr10 78284697 78285164 -67304124 + L3 LINE CR1 640 1153 -424 523 226 0 0 chr10 78285200 78285306 -67303982 + L3 LINE CR1 1392 1497 -80 325 202 92 46 chr10 78285433 78285542 -67303746 + L1ME4a LINE L1 5991 6104 -17 1877 171 3 3 chr10 78287055 78287364 -67301924 - AluSx SINE Alu -3 309 1 1956 108 72 0 chr10 78289242 78289520 -67299768 - AluSx SINE Alu -14 298 1 1308 115 0 21 chr10 78289695 78289887 -67299401 - AluSx SINE Alu -105 207 20 198 0 0 0 chr10 78290223 78290245 -67299043 + (T)n Simple_repeat Simple_repeat 1 22 0 306 0 0 0 chr10 78290924 78290958 -67298330 + (CA)n Simple_repeat Simple_repeat 1 34 0 1032 206 42 0 chr10 78291049 78291263 -67298025 + AluJo SINE Alu 81 303 -9 1826 96 126 4 chr10 78291854 78292115 -67297173 - AluSg1 SINE Alu -16 293 1 1670 187 0 11 chr10 78292821 78293104 -67296184 + AluJb SINE Alu 1 280 -32 240 35 0 0 chr10 78293109 78293138 -67296150 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 2201 125 0 0 chr10 78293538 78293843 -67295445 + AluSq SINE Alu 1 305 -8 2102 128 14 0 chr10 78294357 78294653 -67294635 + AluSx SINE Alu 1 300 -12 577 176 15 81 chr10 78294667 78294803 -67294485 + FLAM_A SINE Alu 1 127 -6 2517 75 0 0 chr10 78295055 78295361 -67293927 + AluY SINE Alu 1 306 -5 1752 191 0 10 chr10 78295757 78296061 -67293227 + AluJb SINE Alu 1 301 -11 1418 116 0 10 chr10 78296075 78296274 -67293014 + AluSg/x SINE Alu 100 296 -16 181 347 21 21 chr10 78296831 78296926 -67292362 - L2 LINE L2 -443 2871 2777 2161 125 0 0 chr10 78296943 78297240 -67292048 + AluSg SINE Alu 2 298 -12 219 303 164 8 chr10 78297269 78297325 -67291963 - MIR SINE MIR -110 152 106 1893 128 3 83 chr10 78297325 78297459 -67291829 + AluSx SINE Alu 1 144 -168 2300 88 3 38 chr10 78297459 78297778 -67291510 + AluSp SINE Alu 1 308 -5 1893 128 3 83 chr10 78297778 78297970 -67291318 + AluSx SINE Alu 144 301 -11 219 303 164 8 chr10 78297970 78298035 -67291253 - MIR SINE MIR -156 106 12 2177 97 3 39 chr10 78298184 78298493 -67290795 + AluSp SINE Alu 5 302 -11 452 309 5 80 chr10 78298494 78298695 -67290593 - MIR3 SINE MIR -20 188 3 2069 126 7 3 chr10 78298905 78299207 -67290081 - AluSg SINE Alu -7 303 1 235 284 92 0 chr10 78299589 78299626 -67289662 - MER91A DNA MER1_type -18 172 140 2206 116 0 3 chr10 78299626 78299919 -67289369 + AluSx SINE Alu 1 292 -20 235 284 92 0 chr10 78299919 78299991 -67289297 - MER91A DNA MER1_type -50 140 56 4395 146 38 70 chr10 78299994 78300644 -67288644 + MER6 DNA MER2_type 5 674 -191 1909 171 3 7 chr10 78300644 78300949 -67288339 - AluJb SINE Alu -8 304 1 4395 146 38 70 chr10 78300949 78301017 -67288271 + MER6 DNA MER2_type 674 743 -122 2104 119 17 0 chr10 78301017 78301310 -67287978 - AluSx SINE Alu -14 298 1 4395 146 38 70 chr10 78301310 78301479 -67287809 + MER6 DNA MER2_type 743 865 0 791 179 109 50 chr10 78301774 78301975 -67287313 + Tigger5 DNA MER2_type 26 238 -2085 763 87 0 0 chr10 78301966 78302081 -67287207 + Tigger5 DNA MER2_type 2086 2200 -123 * 1980 174 56 15 chr10 78302355 78302894 -67286394 + L1P LINE L1 4530 5090 -1056 519 139 0 23 chr10 78303035 78303121 -67286167 + AluJ/FRAM SINE Alu 215 298 -14 198 232 80 80 chr10 78304428 78304540 -67284748 - MIR SINE MIR -46 216 105 469 216 52 146 chr10 78304546 78304631 -67284657 - MIR SINE MIR -2 260 169 1767 178 3 23 chr10 78304631 78304940 -67284348 + AluJb SINE Alu 1 303 -9 469 216 52 146 chr10 78304940 78305067 -67284221 - MIR SINE MIR -93 169 68 240 254 36 0 chr10 78305088 78305143 -67284145 - MER91 DNA MER1_type 0 190 134 1605 201 0 26 chr10 78305481 78305785 -67283503 + AluJo SINE Alu 1 296 -16 899 147 26 16 chr10 78306667 78306857 -67282431 - L1MA8 LINE L1 -3 6288 6097 1977 135 3 0 chr10 78306858 78307183 -67282105 + AluSx SINE Alu 1 326 0 902 135 0 21 chr10 78307367 78307508 -67281780 - AluSp/q SINE Alu -4 309 172 1491 118 0 23 chr10 78307508 78307728 -67281560 + AluSg/x SINE Alu 84 298 -14 1325 226 95 14 chr10 78308546 78308895 -67280393 - L2 LINE L2 0 3313 2937 4105 148 9 14 chr10 78309104 78309876 -67279412 + L1P LINE L1 1119 1886 -4260 681 154 23 8 chr10 78309992 78310122 -67279166 + THE1B LTR MaLR 233 364 0 1146 159 0 16 chr10 78310138 78310320 -67278968 + AluJb SINE Alu 120 298 -14 2420 213 110 3 chr10 78310320 78310936 -67278352 + L1ME1 LINE L1 5478 6159 -7 326 210 81 40 chr10 78310975 78311099 -67278189 + L1M4 LINE L1 4883 5011 -1135 1484 156 80 18 chr10 78311100 78311375 -67277913 - AluJo SINE Alu -20 292 1 338 19 39 0 chr10 78311528 78311580 -67277708 + AluSp/q SINE Alu 250 303 0 443 126 97 39 chr10 78312121 78312224 -67277064 - L1MC5 LINE L1 -51 7910 7802 57 28 0 0 chr10 78312272 78312343 -67276945 + AT_rich Low_complexity Low_complexity 1 71 0 778 160 0 0 chr10 78312344 78312463 -67276825 - FLAM_A SINE Alu -11 122 4 189 0 0 0 chr10 78312463 78312484 -67276804 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 1643 138 0 0 chr10 78312484 78312715 -67276573 - AluSx SINE Alu -27 285 55 564 66 13 0 chr10 78313572 78313648 -67275640 - AluSc SINE Alu -209 100 24 1375 97 0 6 chr10 78313716 78313892 -67275396 + AluSq SINE Alu 1 175 -138 991 167 46 0 chr10 78313897 78314071 -67275217 + AluJo SINE Alu 121 302 -10 207 191 64 0 chr10 78314430 78314477 -67274811 - L2 LINE L2 -223 3049 3000 2250 74 3 49 chr10 78314479 78314803 -67274485 - AluY SINE Alu -2 309 1 535 117 0 0 chr10 78314804 78314881 -67274407 - AluSp/q SINE Alu -33 280 204 285 331 110 7 chr10 78314887 78315041 -67274247 + MIR SINE MIR 87 256 -6 316 207 27 27 chr10 78315071 78315182 -67274106 + (TATATG)n Simple_repeat Simple_repeat 5 115 0 1946 91 87 0 chr10 78315320 78315618 -67273670 - AluSx SINE Alu 0 321 1 657 232 144 21 chr10 78315963 78316157 -67273131 - MIR SINE MIR -44 218 1 236 343 0 0 chr10 78316375 78316442 -67272846 - L3 LINE CR1 -3 1574 1508 245 56 0 0 chr10 78316637 78316673 -67272615 + L1M4 LINE L1 4665 4700 -1446 231 182 0 0 chr10 78316680 78316724 -67272564 - L1ME LINE L1 -447 5723 5680 1086 83 0 89 chr10 78316734 78316902 -67272386 - AluSg/x SINE Alu -2 310 158 244 294 103 0 chr10 78316921 78317047 -67272241 - L1ME LINE L1 -508 5662 5524 5697 101 28 17 chr10 78317060 78318083 -67271205 + MER11B LTR ERVK 1 1015 -56 312 271 47 0 chr10 78318481 78318566 -67270722 - L1MC4 LINE L1 -1342 6700 6612 259 85 43 0 chr10 78318566 78318613 -67270675 + (TA)n Simple_repeat Simple_repeat 2 50 0 2871 138 27 27 chr10 78318614 78319136 -67270152 + Tigger7 DNA MER2_type 1 522 -1965 30 0 0 0 chr10 78319164 78319194 -67270094 + AT_rich Low_complexity Low_complexity 1 30 0 515 172 0 11 chr10 78319204 78319297 -67269991 + Tigger7 DNA MER2_type 2400 2491 0 371 248 71 35 chr10 78319375 78319488 -67269800 - L1MC4 LINE L1 -122 7920 7804 4981 216 64 73 chr10 78319490 78319592 -67269696 - L1MC4a LINE L1 -101 7707 7606 237 108 0 0 chr10 78319592 78319629 -67269659 + (TTCA)n Simple_repeat Simple_repeat 3 39 0 1601 152 76 4 chr10 78319629 78319893 -67269395 - AluJo SINE Alu -29 283 1 4981 216 64 73 chr10 78319893 78321554 -67267734 - L1MC4a LINE L1 -201 7607 5961 2473 56 13 0 chr10 78321554 78321859 -67267429 + AluY SINE Alu 1 309 -2 4981 216 64 73 chr10 78321859 78322186 -67267102 - L1MC4a LINE L1 -1847 5961 5633 430 296 91 40 chr10 78322215 78322620 -67266668 - L1MC4a LINE L1 -1284 4862 4437 314 265 137 38 chr10 78322984 78323195 -67266093 - L1MC4a LINE L1 -1999 4147 3916 420 256 74 23 chr10 78323265 78323574 -67265714 - L1MC4a LINE L1 -2866 3280 2956 354 259 237 7 chr10 78423835 78423974 -67165314 + L1MEd LINE L1 679 849 -5270 491 133 89 0 chr10 78423985 78424075 -67165213 + MER4A LTR ERV1 1 98 -566 1705 128 14 78 chr10 78424076 78424444 -67164844 + MER4A LTR ERV1 262 664 0 690 305 83 57 chr10 78424511 78424970 -67164318 + L1MEc LINE L1 61 531 -5865 500 193 67 0 chr10 78425060 78425179 -67164109 + L1M4 LINE L1 4082 4208 -1938 2093 125 0 0 chr10 78425761 78426049 -67163239 - AluSx SINE Alu -1 311 24 539 295 106 18 chr10 78426393 78426620 -67162668 + MIR SINE MIR 14 260 -2 450 287 88 6 chr10 78426789 78426970 -67162318 - MLT1J2 LTR MaLR -240 210 15 210 280 43 11 chr10 78427563 78427656 -67161632 - MIR3 SINE MIR -1 207 112 1564 220 9 14 chr10 78427697 78428047 -67161241 - MLT1A1 LTR MaLR 0 365 18 430 273 47 27 chr10 78429639 78429789 -67159499 - MIR3 SINE MIR -27 181 29 1531 135 0 46 chr10 78430215 78430474 -67158814 - AluJo SINE Alu -37 275 29 180 0 0 0 chr10 78431455 78431475 -67157813 + (TA)n Simple_repeat Simple_repeat 2 21 0 184 219 164 27 chr10 78431488 78431561 -67157727 - MIR SINE MIR -165 97 15 1055 241 160 24 chr10 78432299 78432743 -67156545 - MLT1C LTR MaLR 0 488 1 1540 103 15 5 chr10 78433238 78433442 -67155846 + AluSq SINE Alu 1 206 -107 432 36 0 0 chr10 78433443 78433499 -67155789 + AluSq SINE Alu 242 297 -13 344 266 0 0 chr10 78433708 78433802 -67155486 - L1MEd LINE L1 -6008 111 18 376 297 132 10 chr10 78433816 78434119 -67155169 - L1ME4a LINE L1 -234 5887 5548 547 331 69 0 chr10 78434304 78434479 -67154809 - MIR SINE MIR -73 189 3 507 292 18 6 chr10 78435444 78435612 -67153676 + MIR3 SINE MIR 13 182 -26 455 138 202 0 chr10 78436341 78436435 -67152853 + MER81 DNA DNA 2 114 0 1024 160 120 17 chr10 78436786 78437068 -67152220 + MLT2B1 LTR ERVL 202 520 0 417 229 84 24 chr10 78437084 78437250 -67152038 + LTR33 LTR ERVL 346 521 0 280 197 33 0 chr10 78437563 78437624 -67151664 - MIR3 SINE MIR -1 207 145 271 171 12 24 chr10 78437663 78437745 -67151543 + (CACCAT)n Simple_repeat Simple_repeat 1 81 0 417 227 21 14 chr10 78437764 78437905 -67151383 + (CCA)n Simple_repeat Simple_repeat 1 142 0 265 363 22 0 chr10 78437925 78438016 -67151272 - MIR SINE MIR -85 123 31 1805 142 0 0 chr10 78438188 78438459 -67150829 + AluSx SINE Alu 37 307 0 277 326 149 7 chr10 78438793 78438934 -67150354 - MIR SINE MIR -50 212 52 2014 164 0 0 chr10 78439193 78439504 -67149784 - AluJb SINE Alu -1 311 1 233 281 182 8 chr10 78439567 78439688 -67149600 + MIR3 SINE MIR 18 159 -49 1682 165 34 9 chr10 78440500 78440821 -67148467 + MLT1A1 LTR MaLR 9 337 -28 6796 68 0 7 chr10 78440822 78441843 -67147445 - L1PA7 LINE L1 0 6154 5128 2433 192 89 15 chr10 78442029 78442570 -67146718 - MER119 DNA MER1_type -2 581 1 2430 92 0 3 chr10 78442801 78443107 -67146181 + AluSc SINE Alu 1 305 -4 624 209 78 7 chr10 78443609 78443762 -67145526 - Charlie1 DNA MER1_type -255 2506 2343 283 286 36 36 chr10 78443862 78443974 -67145314 - MIR SINE MIR -61 147 36 493 298 56 75 chr10 78444037 78444407 -67144881 - L1MEc LINE L1 -4651 1587 1212 4828 48 0 0 chr10 78444407 78444986 -67144302 + L1PA6 LINE L1 5576 6154 0 493 298 56 75 chr10 78444986 78445190 -67144098 - L1MEc LINE L1 -5026 1212 1063 2412 115 0 0 chr10 78445190 78445502 -67143786 - AluSx SINE Alu 0 312 1 493 298 56 75 chr10 78445502 78445590 -67143698 - L1MEc LINE L1 -5175 1063 975 1260 218 51 23 chr10 78445838 78446191 -67143097 - MLT1A2 LTR MaLR -11 363 1 1675 88 0 0 chr10 78446333 78446538 -67142750 + AluSg SINE Alu 1 205 -105 1504 227 88 49 chr10 78446646 78447008 -67142280 + L1MC3 LINE L1 4946 4837 -1309 2211 135 3 0 chr10 78447008 78447319 -67141969 - AluSx SINE Alu 0 312 1 1504 227 88 49 chr10 78447319 78447911 -67141377 + L1MC3 LINE L1 4836 5403 -743 555 240 7 20 chr10 78447910 78448056 -67141232 + L1MA10 LINE L1 6184 6327 -7 * 1900 162 7 3 chr10 78448082 78448379 -67140909 + AluJb SINE Alu 1 298 -14 407 293 53 8 chr10 78449927 78450060 -67139228 + MER5B DNA MER1_type 1 139 -39 487 224 211 0 chr10 78450108 78450260 -67139028 + MER5A DNA MER1_type 6 189 0 2750 136 19 7 chr10 78450937 78451357 -67137931 + MSTB LTR MaLR 1 425 -1 817 255 43 14 chr10 78451679 78451887 -67137401 + MIR SINE MIR 36 249 -13 1981 169 0 6 chr10 78451924 78452238 -67137050 - AluSx SINE Alu 0 312 1 391 297 119 104 chr10 78453214 78453568 -67135720 + L2 LINE L2 2914 3272 0 599 304 42 29 chr10 78453609 78453849 -67135439 + L3 LINE CR1 1333 1575 -2 389 255 112 80 chr10 78454352 78454505 -67134783 - Charlie8 DNA MER1_type -59 271 109 2361 107 0 0 chr10 78454505 78454815 -67134473 - AluSx SINE Alu -2 310 1 389 255 112 80 chr10 78454815 78454849 -67134439 - Charlie8 DNA MER1_type -221 109 78 525 277 135 10 chr10 78455072 78455385 -67133903 + LTR16A LTR ERVL 21 362 -88 776 246 170 7 chr10 78455684 78455973 -67133315 + L1ME2 LINE L1 4252 4587 -1559 1824 117 9 22 chr10 78455974 78456324 -67132964 - MER4A LTR ERV1 0 664 261 602 79 10 40 chr10 78456324 78456425 -67132863 - MER4A LTR ERV1 -566 98 1 1874 213 67 32 chr10 78456425 78457022 -67132266 + L1ME2 LINE L1 4585 5202 -944 687 195 0 16 chr10 78457023 78457146 -67132142 + AluJ SINE Alu 85 205 -107 632 137 29 0 chr10 78457222 78457324 -67131964 + AluJ SINE Alu 206 310 -2 477 225 60 0 chr10 78457325 78457476 -67131812 + L1ME2 LINE L1 5190 5349 -797 2414 121 164 6 chr10 78457499 78457970 -67131318 - LTR10A LTR ERV1 -64 545 1 265 122 41 0 chr10 78457993 78458042 -67131246 - LTR10B LTR ERV1 -496 51 1 2007 213 11 48 chr10 78458043 78458569 -67130719 + L1ME2 LINE L1 5354 5860 -304 1313 187 52 110 chr10 78458571 78458991 -67130297 + MLT1C LTR MaLR 1 467 0 945 211 29 20 chr10 78458992 78459238 -67130050 + L1ME2 LINE L1 5873 6120 -44 3104 176 191 107 chr10 78459319 78459389 -67129899 + L1MD3 LINE L1 6527 6590 -1405 2379 124 94 8 chr10 78459389 78459783 -67129505 - MSTC LTR MaLR 0 428 1 3104 176 191 107 chr10 78459783 78460190 -67129098 + L1MD3 LINE L1 6590 6961 -1034 1912 178 0 0 chr10 78460190 78460499 -67128789 - AluSx SINE Alu -3 309 1 3104 176 191 107 chr10 78460499 78460684 -67128604 + L1MD3 LINE L1 6961 7129 -866 460 209 26 0 chr10 78460684 78460799 -67128489 + MLT1F1 LTR MaLR 1 118 -449 3104 176 191 107 chr10 78460799 78461383 -67127905 + L1MD3 LINE L1 7129 7986 -9 291 54 0 0 chr10 78461746 78461783 -67127505 + (TTCTCC)n Simple_repeat Simple_repeat 3 39 0 191 319 88 19 chr10 78464911 78465071 -67124217 + MIR3 SINE MIR 16 186 -22 582 41 0 0 chr10 78465157 78465230 -67124058 + (CA)n Simple_repeat Simple_repeat 2 74 0 3706 127 13 2 chr10 78466202 78466747 -67122541 - L1PA15 LINE L1 -2 6163 5613 201 241 139 0 chr10 78470000 78470075 -67119213 + MIR SINE MIR 73 161 -101 227 262 28 84 chr10 78470520 78470627 -67118661 - MIR3 SINE MIR -93 115 15 409 253 75 65 chr10 78471349 78471535 -67117753 + MIR SINE MIR 1 188 -74 1803 175 31 0 chr10 78471618 78471909 -67117379 + AluSx SINE Alu 1 300 -12 526 249 131 13 chr10 78472237 78472466 -67116822 + MIR SINE MIR 7 262 0 691 269 91 33 chr10 78473279 78473521 -67115767 - MIR SINE MIR -2 260 5 608 210 45 57 chr10 78473572 78473748 -67115540 + L1MC5 LINE L1 7744 7917 -44 266 253 120 0 chr10 78473762 78473837 -67115451 + MIR SINE MIR 48 131 -131 342 0 0 0 chr10 78474089 78474127 -67115161 + (TG)n Simple_repeat Simple_repeat 1 38 0 534 57 0 0 chr10 78474739 78474809 -67114479 + (TG)n Simple_repeat Simple_repeat 2 71 0 250 139 0 0 chr10 78474862 78474898 -67114390 - U2 snRNA snRNA -152 36 1 287 226 16 0 chr10 78474926 78474988 -67114300 + MLT1E LTR MaLR 1 63 -479 1510 214 54 27 chr10 78475015 78475388 -67113900 + MLT1E LTR MaLR 211 593 0 409 237 48 97 chr10 78475587 78475766 -67113522 - MIR SINE MIR -67 141 10 214 177 177 0 chr10 78475989 78476051 -67113237 - L2 LINE L2 0 3313 3241 2069 159 0 7 chr10 78476143 78476451 -67112837 + AluJb SINE Alu 1 306 -6 259 200 123 31 chr10 78476505 78476570 -67112718 - L2 LINE L2 -81 3191 3121 225 270 110 8 chr10 78476876 78477036 -67112252 - MIR SINE MIR -37 225 24 189 194 125 69 chr10 78477968 78478040 -67111248 + MIR3 SINE MIR 10 85 -123 653 271 20 68 chr10 78478275 78478526 -67110762 - MIR SINE MIR -20 242 4 2177 102 0 26 chr10 78479692 78480026 -67109262 - AluSq SINE Alu 0 313 1 248 328 16 41 chr10 78480177 78480299 -67108989 - MIR SINE MIR -56 152 34 260 214 18 18 chr10 78481141 78481197 -67108091 - L2 LINE L2 -10 3303 3248 439 260 60 20 chr10 78481283 78481433 -67107855 + MIR SINE MIR 49 204 -58 1754 172 50 0 chr10 78481433 78481730 -67107558 + AluSx SINE Alu 1 312 0 180 152 0 0 chr10 78481771 78481804 -67107484 + (TTA)n Simple_repeat Simple_repeat 2 34 0 2057 129 3 0 chr10 78483605 78483891 -67105397 - AluSq SINE Alu -26 287 1 2338 122 0 0 chr10 78483901 78484213 -67105075 - AluSx SINE Alu 0 312 1 2090 111 3 54 chr10 78485143 78485459 -67103829 + AluSx SINE Alu 1 300 -12 644 264 32 68 chr10 78486748 78486968 -67102320 + LTR33A LTR ERVL 3 214 -309 1119 236 59 33 chr10 78487004 78487200 -67102088 - L1M4 LINE L1 -2091 4055 3866 884 215 0 35 chr10 78487200 78487372 -67101916 - FAM SINE Alu -8 167 2 1119 236 59 33 chr10 78487372 78487565 -67101723 - L1M4 LINE L1 -2280 3866 3656 1286 261 93 60 chr10 78487587 78487802 -67101486 + LTR41 LTR ERVL 11 217 -556 1538 176 40 64 chr10 78487802 78488176 -67101112 - MLT1A1 LTR MaLR 0 365 1 1286 261 93 60 chr10 78488176 78488640 -67100648 + LTR41 LTR ERVL 217 716 -57 1796 174 0 4 chr10 78488640 78488921 -67100367 + AluJo SINE Alu 1 280 -32 2508 156 6 10 chr10 78488927 78489407 -67099881 - L1P LINE L1 -1486 4660 4183 338 279 0 137 chr10 78489507 78489616 -67099672 + MIR SINE MIR 31 107 -155 2693 39 7 3 chr10 78489616 78489925 -67099363 - AluY SINE Alu 0 311 2 338 279 0 137 chr10 78489925 78489998 -67099290 + MIR SINE MIR 107 188 -74 2215 129 94 32 chr10 78491230 78491633 -67097655 - MSTC LTR MaLR 0 428 1 206 240 147 0 chr10 78492020 78492095 -67097193 + MIR3 SINE MIR 109 194 -14 1707 172 7 21 chr10 78494260 78494570 -67094718 + AluJo SINE Alu 1 306 0 415 330 17 40 chr10 78494986 78495159 -67094129 + MIR SINE MIR 5 173 -89 227 272 25 49 chr10 78495201 78495282 -67094006 - MIR SINE MIR -15 247 169 2100 116 38 0 chr10 78495587 78495879 -67093409 - AluSg SINE Alu -7 303 1 364 252 243 43 chr10 78496457 78496667 -67092621 - L2 LINE L2 -1 3271 3020 286 301 58 102 chr10 78496687 78496893 -67092395 + L2 LINE L2 2985 3181 -91 268 220 0 0 chr10 78497975 78498025 -67091263 + CT-rich Low_complexity Low_complexity 2 51 0 381 247 72 10 chr10 78498522 78498619 -67090669 - L2 LINE L2 -51 3221 3119 678 209 43 26 chr10 78498791 78499140 -67090148 + MER69 DNA AcHobo 1 407 -819 437 199 31 68 chr10 78499265 78499391 -67089897 + MER69 DNA AcHobo 2328 2448 -78 2099 154 3 0 chr10 78499391 78499702 -67089586 - AluJb SINE Alu 0 312 1 437 199 31 68 chr10 78499702 78499736 -67089552 + MER69 DNA AcHobo 2448 2482 -44 2475 85 0 3 chr10 78500116 78500423 -67088865 - AluSc SINE Alu -2 307 2 237 83 0 0 chr10 78500641 78500677 -67088611 + (TG)n Simple_repeat Simple_repeat 2 37 0 253 300 50 67 chr10 78502531 78502651 -67086637 - L2 LINE L2 -7 3265 3148 327 336 87 59 chr10 78502755 78503193 -67086095 + MLT1K LTR MaLR 16 465 -123 2805 214 34 49 chr10 78503637 78504337 -67084951 + MER52A LTR ERV1 212 901 -854 1961 192 82 92 chr10 78504524 78505119 -67084169 + LTR1B LTR ERV1 238 826 0 339 302 47 17 chr10 78505123 78505295 -67083993 - L1MEd LINE L1 -5941 178 2 582 238 157 0 chr10 78506242 78506389 -67082899 - MER5A DNA MER1_type 0 189 20 419 212 59 123 chr10 78506434 78506604 -67082684 + MER5B DNA MER1_type 19 177 -1 267 309 229 20 chr10 78507653 78507854 -67081434 + MIR SINE MIR 1 243 -19 799 130 6 6 chr10 78507999 78508160 -67081128 + (TCCA)n Simple_repeat Simple_repeat 4 164 0 447 286 45 32 chr10 78508204 78508358 -67080930 - MER5A DNA MER1_type -33 156 1 236 125 143 18 chr10 78508358 78508414 -67080874 - MIR3 SINE MIR -48 160 98 192 353 0 0 chr10 78508962 78509030 -67080258 + MIR SINE MIR 33 100 -108 1954 99 31 20 chr10 78509124 78509418 -67079870 - AluSg SINE Alu -13 297 1 21 36 0 0 chr10 78509423 78509451 -67079837 + AT_rich Low_complexity Low_complexity 1 28 0 331 236 36 55 chr10 78509460 78509503 -67079785 + MER103 DNA DNA 1 43 -123 1235 216 106 34 chr10 78509503 78509939 -67079349 + MLT1C LTR MaLR 1 467 0 331 236 36 55 chr10 78509939 78510005 -67079283 + MER103 DNA DNA 43 108 -58 2235 75 0 0 chr10 78510037 78510349 -67078939 + AluY SINE Alu 1 312 0 807 238 154 0 chr10 78510841 78511055 -67078233 - MIR SINE MIR -13 249 3 204 350 12 0 chr10 78511094 78511174 -67078114 - L2 LINE L2 0 3272 3192 343 302 58 14 chr10 78511625 78511764 -67077524 - MIR SINE MIR -1 261 117 195 296 19 0 chr10 78511959 78512013 -67077275 + MIR SINE MIR 205 259 -3 786 278 134 63 chr10 78513333 78513647 -67075641 + L1MC5 LINE L1 5877 6167 -1641 2478 159 21 21 chr10 78513647 78514074 -67075214 + MSTC LTR MaLR 1 427 -1 786 278 134 63 chr10 78514074 78514745 -67074543 + L1MC5 LINE L1 6167 6948 -860 3398 214 119 38 chr10 78514754 78515707 -67073581 - L1MCb LINE L1 -5015 1030 1 1950 240 128 25 chr10 78515792 78516391 -67072897 - MLT2F LTR ERVL -1 645 1 304 253 81 0 chr10 78516391 78516478 -67072810 + L1MC5 LINE L1 6993 7086 -875 241 247 41 14 chr10 78516491 78516564 -67072724 - MLT1F LTR MaLR -215 327 253 * 261 317 98 0 chr10 78516532 78516614 -67072674 - MLT1H LTR MaLR -229 320 231 2978 131 27 37 chr10 78516657 78517008 -67072280 - L1MC1 LINE L1 -5 6328 5982 2100 103 7 13 chr10 78517008 78517310 -67071978 - AluSx SINE Alu -12 300 1 2978 131 27 37 chr10 78517310 78517476 -67071812 - L1MC1 LINE L1 -351 5982 5816 234 62 0 0 chr10 78517476 78517508 -67071780 + (TTCC)n Simple_repeat Simple_repeat 3 34 0 788 196 0 0 chr10 78517515 78517648 -67071640 - FLAM_C SINE Alu 0 133 1 5126 196 29 5 chr10 78517648 78518524 -67070764 - L1MC1 LINE L1 -502 5831 4978 240 86 0 0 chr10 78518524 78518559 -67070729 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5126 196 29 5 chr10 78518559 78519421 -67069867 - L1MC1 LINE L1 -1355 4978 4052 294 29 0 0 chr10 78521633 78521668 -67067620 + (CA)n Simple_repeat Simple_repeat 2 36 0 396 257 19 146 chr10 78521960 78522166 -67067122 + MLT1K LTR MaLR 73 252 -336 845 210 422 30 chr10 78522501 78523067 -67066221 + LTR50 LTR ERVL 8 795 0 384 253 118 62 chr10 78523077 78523255 -67066033 - MER58A DNA MER1_type 0 224 37 262 323 16 63 chr10 78523377 78523504 -67065784 + MIR3 SINE MIR 87 207 -1 1383 255 17 20 chr10 78523538 78523895 -67065393 - LTR16A LTR ERVL -5 445 90 1866 119 44 75 chr10 78523915 78524302 -67064986 - THE1C LTR MaLR 0 375 1 899 293 65 57 chr10 78524546 78525164 -67064124 - ERVL LTR ERVL -441 5323 4701 350 346 0 0 chr10 78525198 78525325 -67063963 - ERVL LTR ERVL -897 4588 4462 934 316 215 12 chr10 78525796 78526149 -67063139 + L2 LINE L2 2006 2286 -986 2044 129 186 21 chr10 78526149 78526537 -67062751 - LTR47A LTR ERVL 0 452 1 934 316 215 12 chr10 78526537 78527202 -67062086 + L2 LINE L2 2286 3252 -20 852 247 38 21 chr10 78527207 78527442 -67061846 - MIR SINE MIR -22 240 2 287 318 63 0 chr10 78527834 78527960 -67061328 - L3b LINE CR1 -194 1389 1256 471 252 29 29 chr10 78528319 78528458 -67060830 + MIR3 SINE MIR 18 156 -52 1846 128 0 67 chr10 78528694 78529007 -67060281 - AluSx SINE Alu -20 292 1 612 260 101 31 chr10 78529055 78529282 -67060006 - MIR SINE MIR -17 245 3 259 219 171 8 chr10 78529325 78529448 -67059840 + Charlie7 DNA MER1_type 2469 2611 -1 2551 202 55 9 chr10 78529732 78530292 -67058996 - L1MD1 LINE L1 0 6502 5917 * 3196 231 32 27 chr10 78530287 78530757 -67058531 - L1MD1 LINE L1 -822 5584 5118 1639 162 42 0 chr10 78530757 78531041 -67058247 + AluJb SINE Alu 1 296 -16 3196 231 32 27 chr10 78531041 78531594 -67057694 - L1MD1 LINE L1 -1288 5118 4556 603 203 8 8 chr10 78531569 78531697 -67057591 - L1MD1 LINE L1 -5324 1085 958 * 910 198 6 0 chr10 78531691 78531853 -67057435 - L1M2 LINE L1 -5991 858 696 835 116 30 3 chr10 78531853 78531988 -67057300 - MSTA LTR MaLR 0 428 292 2957 184 16 2 chr10 78531988 78532484 -67056804 - L1M2 LINE L1 -6344 505 3 2503 237 46 38 chr10 78532498 78533279 -67056009 - L1M4 LINE L1 -1908 4238 3452 3355 214 83 71 chr10 78533288 78533376 -67055912 - L1MDb LINE L1 -4564 1976 1891 1725 162 0 23 chr10 78533376 78533715 -67055573 - AluJb SINE Alu 0 312 1 3355 214 83 71 chr10 78533715 78534142 -67055146 - L1MDb LINE L1 -4649 1891 1471 2100 98 0 7 chr10 78534142 78534429 -67054859 - AluSc SINE Alu -22 287 3 3355 214 83 71 chr10 78534429 78535393 -67053895 - L1MDb LINE L1 -5069 1471 526 335 224 15 0 chr10 78535412 78535479 -67053809 - L1MDb LINE L1 -6194 349 282 249 203 188 0 chr10 78535483 78535547 -67053741 + MLT1C LTR MaLR 8 83 -384 746 125 0 70 chr10 78535557 78535685 -67053603 - FLAM_A SINE Alu -10 123 5 2025 183 13 25 chr10 78535699 78536097 -67053191 + MLT1C LTR MaLR 75 467 0 531 296 1 1 chr10 78536097 78536235 -67053053 - L1MDb LINE L1 -6263 280 19 322 333 8 0 chr10 78536354 78536471 -67052817 + HAL1 LINE L1 1759 1876 -631 207 100 0 0 chr10 78537029 78537059 -67052229 + (TA)n Simple_repeat Simple_repeat 2 31 0 1530 188 23 79 chr10 78537518 78537911 -67051377 - MLT1A2 LTR MaLR 0 374 4 1387 241 13 71 chr10 78538281 78538675 -67050613 + MLT1K LTR MaLR 4 374 -214 726 301 99 28 chr10 78538675 78539100 -67050188 - MLT1L LTR MaLR 0 615 161 795 250 50 14 chr10 78539129 78539349 -67049939 + MLT2C1 LTR ERVL 1 228 -169 1783 129 0 8 chr10 78539382 78539645 -67049643 - MER4E LTR ERV1 0 779 519 241 125 25 0 chr10 78539645 78539685 -67049603 + L1MD3 LINE L1 6961 7001 -994 336 191 0 0 chr10 78539685 78539748 -67049540 - MLT1A2 LTR MaLR -2 372 310 1339 118 0 19 chr10 78539748 78539959 -67049329 + AluSq SINE Alu 90 296 -17 233 158 0 0 chr10 78539960 78539998 -67049290 + L1P LINE L1 3887 3924 -2222 286 254 41 49 chr10 78540121 78540243 -67049045 - L1ME4a LINE L1 -53 6068 5948 315 49 0 0 chr10 78540251 78540292 -67048996 + (GA)n Simple_repeat Simple_repeat 2 42 0 661 244 56 17 chr10 78540382 78540519 -67048769 - L1ME4a LINE L1 -303 5818 5667 1955 132 0 7 chr10 78540519 78540815 -67048473 - AluSx SINE Alu -18 294 1 661 244 56 17 chr10 78540815 78540911 -67048377 - L1ME4a LINE L1 -454 5667 5576 402 326 8 0 chr10 78541410 78541539 -67047749 + MIR SINE MIR 65 194 -68 477 260 65 26 chr10 78541804 78541958 -67047330 - MIR SINE MIR -78 184 25 563 282 127 31 chr10 78542576 78542835 -67046453 - MER102b DNA MER1_type -15 326 43 364 271 22 122 chr10 78542878 78543059 -67046229 - MIR3 SINE MIR -20 188 26 4822 261 90 35 chr10 78543810 78545018 -67044270 - L1MEc LINE L1 -4266 2130 769 2001 128 106 69 chr10 78545018 78545454 -67043834 - LTR47A LTR ERVL 0 452 1 4822 261 90 35 chr10 78545454 78546232 -67043056 - L1MEc LINE L1 -5627 769 35 957 291 88 50 chr10 78546420 78546974 -67042314 + MLT1K LTR MaLR 2 576 -12 309 225 22 45 chr10 78547008 78547097 -67042191 + Charlie7 DNA MER1_type 6 92 -2520 243 270 52 87 chr10 78547173 78547288 -67042000 + L2 LINE L2 3162 3272 0 1184 136 0 0 chr10 78547399 78547575 -67041713 - AluSx SINE Alu -19 293 118 37 23 0 0 chr10 78547579 78547623 -67041665 + AT_rich Low_complexity Low_complexity 1 44 0 888 102 55 0 chr10 78547623 78547750 -67041538 - AluSx SINE Alu -179 134 1 224 271 169 92 chr10 78547808 78548265 -67041023 - L2 LINE L2 -648 2666 2175 261 21 21 42 chr10 78548591 78548639 -67040649 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 2158 98 0 3 chr10 78548641 78548937 -67040351 - AluSg SINE Alu -15 295 1 522 0 0 0 chr10 78550700 78550707 -67038581 + (CA)n Simple_repeat Simple_repeat 1 65 0 522 0 0 0 chr10 78550707 78550765 -67038523 + (CA)n Simple_repeat Simple_repeat 2 59 0 181 368 23 60 chr10 78551453 78551586 -67037702 + L3 LINE CR1 431 558 -1019 463 287 42 14 chr10 78551609 78551752 -67037536 - MIR SINE MIR -114 148 2 1145 109 0 0 chr10 78551755 78551902 -67037386 + THE1C LTR MaLR 2 148 -227 4010 61 44 0 chr10 78552002 78552961 -67036327 - L1P3 LINE L1 -330 5824 4818 270 273 82 27 chr10 78552994 78553104 -67036184 + MIR SINE MIR 113 228 -34 232 293 217 30 chr10 78553118 78553422 -67035866 - L2 LINE L2 -3 3310 2950 582 288 87 40 chr10 78553452 78554011 -67035277 + MLT1L LTR MaLR 2 613 -2 290 327 20 0 chr10 78554138 78554239 -67035049 - L2 LINE L2 -613 2701 2599 224 261 70 99 chr10 78554391 78554533 -67034755 + MIR3 SINE MIR 6 143 -65 1666 177 43 107 chr10 78555126 78555566 -67033722 + MLT2D LTR ERVL 1 412 -2 404 291 92 18 chr10 78557182 78557367 -67031921 - MIR SINE MIR -46 216 24 193 329 0 0 chr10 78557656 78557726 -67031562 - MIR SINE MIR -61 201 132 366 265 41 0 chr10 78558776 78558874 -67030414 - Charlie8 DNA MER1_type -2257 160 59 200 383 104 0 chr10 78561066 78561181 -67028107 + MIR SINE MIR 88 214 -48 305 263 51 3 chr10 78561877 78562016 -67027272 + MIR SINE MIR 77 262 0 182 294 76 11 chr10 78562649 78562741 -67026547 + MIR SINE MIR 48 145 -117 794 150 0 0 chr10 78563228 78563341 -67025947 - AluSg SINE Alu -195 115 3 1363 102 0 31 chr10 78563341 78563537 -67025751 + AluSg/x SINE Alu 116 305 -7 2034 124 3 31 chr10 78564594 78564916 -67024372 + AluSq SINE Alu 1 313 0 264 281 67 76 chr10 78565164 78565388 -67023900 - L2 LINE L2 -75 3238 3017 201 253 165 51 chr10 78565665 78565744 -67023544 + MIR SINE MIR 99 186 -76 252 229 0 0 chr10 78566823 78566906 -67022382 + CT-rich Low_complexity Low_complexity 1 83 0 524 236 198 19 chr10 78567506 78567718 -67021570 - MIR SINE MIR 0 262 13 361 207 326 7 chr10 78567786 78567921 -67021367 + MER45A DNA AcHobo 1 178 0 296 338 28 0 chr10 78568542 78568687 -67020601 + MIR3 SINE MIR 60 208 0 381 248 41 16 chr10 78568828 78568949 -67020339 - MLT1K LTR MaLR -309 279 156 201 367 48 39 chr10 78569021 78569250 -67020038 + L2 LINE L2 3036 3266 -6 235 250 13 22 chr10 78569390 78569492 -67019796 - MLT1K LTR MaLR -28 587 482 4637 165 25 24 chr10 78569493 78570295 -67018993 - MER52A LTR ERV1 0 1755 953 509 217 189 0 chr10 78571147 78571290 -67017998 - MIR SINE MIR -75 187 18 293 309 24 0 chr10 78571384 78571468 -67017820 - L1ME3A LINE L1 -56 6114 6029 1376 282 81 40 chr10 78571600 78572758 -67016530 - L1ME3A LINE L1 -209 5961 4759 7036 207 81 27 chr10 78572789 78575473 -67013815 + L1MDa LINE L1 22 3094 -3446 1574 157 94 3 chr10 78575473 78575759 -67013529 + AluJo SINE Alu 1 312 0 7036 207 81 27 chr10 78575759 78576416 -67012872 + L1MDa LINE L1 3094 3714 -2826 297 350 58 29 chr10 78576432 78576672 -67012616 + MLT1J LTR MaLR 135 381 -130 566 27 0 14 chr10 78576962 78577035 -67012253 + (CTA)n Simple_repeat Simple_repeat 2 73 0 319 266 112 56 chr10 78577697 78577840 -67011448 + MIR SINE MIR 12 162 -100 566 250 49 21 chr10 78578537 78578705 -67010583 + MER5B DNA MER1_type 1 182 -7 211 306 16 0 chr10 78578896 78578958 -67010330 - MIR SINE MIR -1 261 199 207 274 96 0 chr10 78579205 78579278 -67010010 + L2 LINE L2 3220 3299 -14 195 204 23 0 chr10 78579697 78579741 -67009547 + L2 LINE L2 3141 3185 -87 181 100 75 0 chr10 78579866 78579906 -67009382 + CT-rich Low_complexity Low_complexity 3 45 0 202 306 14 0 chr10 78579917 78579989 -67009299 + C-rich Low_complexity Low_complexity 2 74 0 31 44 0 0 chr10 78580311 78580356 -67008932 + GC_rich Low_complexity Low_complexity 1 45 0 305 348 69 15 chr10 78580985 78581189 -67008099 + MIR SINE MIR 28 242 -20 2446 66 3 0 chr10 78582051 78582352 -67006936 + AluSg SINE Alu 1 302 -8 497 296 109 0 chr10 78583104 78583324 -67005964 - MER113 DNA MER1_type? -6 515 272 225 238 90 49 chr10 78585952 78586078 -67003210 + MIR SINE MIR 41 178 -30 439 289 152 19 chr10 78586379 78586590 -67002698 - MIR SINE MIR -11 251 13 309 291 196 6 chr10 78587308 78587487 -67001801 + MIR SINE MIR 33 245 -17 1184 257 70 13 chr10 78587510 78587907 -67001381 + MER113 DNA MER1_type? 69 488 -33 419 294 129 13 chr10 78588007 78588310 -67000978 - L1MC4a LINE L1 -1654 6154 5817 193 263 53 0 chr10 78588349 78588406 -67000882 + MIR3 SINE MIR 129 188 -20 200 281 0 31 chr10 78588681 78588745 -67000543 + MIR3 SINE MIR 126 187 -21 1456 107 0 19 chr10 78588875 78589090 -67000198 - L1PA13 LINE L1 -1 6162 5952 215 120 300 0 chr10 78590056 78590106 -66999182 + MIR SINE MIR 85 149 -113 206 305 57 19 chr10 78590552 78590657 -66998631 + MER5B DNA MER1_type 2 110 -68 233 167 19 0 chr10 78590998 78591052 -66998236 + GA-rich Low_complexity Low_complexity 2 56 0 261 265 76 38 chr10 78591722 78591854 -66997434 + MIR SINE MIR 47 183 -79 1163 181 434 10 chr10 78591912 78592327 -66996961 - MLT1E LTR MaLR -2 591 1 317 288 259 1 chr10 78592357 78592537 -66996751 - MIR SINE MIR -13 249 27 184 246 18 35 chr10 78592821 78592878 -66996410 - L2 LINE L2 -8 3264 3209 383 228 13 0 chr10 78593088 78593167 -66996121 - MLT1J LTR MaLR -202 309 230 403 296 5 82 chr10 78593235 78593431 -66995857 + L2 LINE L2 3132 3312 -1 301 326 0 0 chr10 78593537 78593629 -66995659 - MIR SINE MIR -48 214 123 354 248 40 0 chr10 78594321 78594422 -66994866 - MIR3 SINE MIR -48 160 56 322 234 9 28 chr10 78595078 78595185 -66994103 + CT-rich Low_complexity Low_complexity 4 108 0 203 327 6 32 chr10 78595723 78595879 -66993409 + GA-rich Low_complexity Low_complexity 5 156 0 284 332 37 47 chr10 78696493 78696683 -66892605 + L2 LINE L2 2862 3049 -223 346 219 186 10 chr10 78696769 78696866 -66892422 + MIR SINE MIR 31 143 -65 187 217 50 50 chr10 78697035 78697095 -66892193 + L2 LINE L2 3210 3269 -3 569 207 24 67 chr10 78698076 78698255 -66891033 + L1ME3A LINE L1 5700 5873 -291 1896 229 147 113 chr10 78698273 78699332 -66889956 + L1MC4 LINE L1 6945 8039 -3 27 62 0 0 chr10 78699402 78699450 -66889838 + AT_rich Low_complexity Low_complexity 1 48 0 2088 128 17 0 chr10 78699815 78700112 -66889176 - AluSx SINE Alu -10 302 1 722 102 102 39 chr10 78700112 78700240 -66889048 - AluSc SINE Alu -4 305 170 2200 159 14 66 chr10 78700621 78701119 -66888169 + L1M4 LINE L1 4562 5033 -1113 * 3591 140 52 5 chr10 78701113 78701741 -66887547 - L1 LINE L1 -1493 4653 3996 861 114 31 104 chr10 78701737 78701953 -66887335 + L1MA6 LINE L1 5225 5426 -743 * 2545 140 50 7 chr10 78701953 78702375 -66886913 - Tigger3b DNA MER2_type -81 1151 712 683 146 0 6 chr10 78702376 78702622 -66886666 - AluJb SINE Alu -15 297 1 1822 93 75 85 chr10 78702646 78702729 -66886559 - Tigger3b DNA MER2_type -2383 645 563 2005 97 4 4 chr10 78702729 78703031 -66886257 + AluY SINE Alu 16 317 0 1822 93 75 85 chr10 78703031 78703071 -66886217 - Tigger3b DNA MER2_type -2465 563 524 1799 161 13 3 chr10 78703071 78703369 -66885919 + AluJo SINE Alu 1 301 -11 1822 93 75 85 chr10 78703369 78703619 -66885669 - Tigger3b DNA MER2_type -2504 524 274 559 213 0 0 chr10 78703617 78703711 -66885577 - Tigger3b DNA MER2_type -1129 102 9 * 4735 122 51 7 chr10 78703711 78704097 -66885191 + L1MA6 LINE L1 5533 5901 -399 2114 117 7 13 chr10 78704097 78704396 -66884892 - AluSx SINE Alu -15 297 1 4735 122 51 7 chr10 78704396 78704739 -66884549 + L1MA6 LINE L1 5901 6294 -6 2538 70 0 0 chr10 78704750 78705052 -66884236 - AluY SINE Alu -9 302 1 1183 179 44 10 chr10 78705080 78705437 -66883851 + L1M4 LINE L1 5154 5520 -658 2886 165 92 0 chr10 78705442 78705988 -66883300 - LTR31 LTR ERV1 -15 604 9 513 138 0 101 chr10 78706046 78706120 -66883168 + L1M4 LINE L1 5534 5595 -589 1944 115 3 49 chr10 78706120 78706425 -66882863 + AluSx SINE Alu 1 291 -21 513 138 0 101 chr10 78706425 78706459 -66882829 + L1M4 LINE L1 5595 5631 -553 491 133 12 12 chr10 78706564 78706647 -66882641 - AluS SINE Alu -229 83 1 224 122 24 0 chr10 78706696 78706737 -66882551 + (TA)n Simple_repeat Simple_repeat 1 42 0 2023 131 24 3 chr10 78706783 78707081 -66882207 + AluSx SINE Alu 1 304 -8 2064 120 52 0 chr10 78708006 78708297 -66880991 + AluSx SINE Alu 1 306 -6 2524 40 40 0 chr10 78709878 78710177 -66879111 - AluY SINE Alu 0 311 1 186 43 0 0 chr10 78710247 78710270 -66879018 + (ATG)n Simple_repeat Simple_repeat 3 25 0 2163 119 7 0 chr10 78711178 78711473 -66877815 - AluSx SINE Alu -15 297 1 1908 164 0 19 chr10 78712143 78712461 -66876827 - AluJo SINE Alu 0 312 1 183 302 0 48 chr10 78712642 78712705 -66876583 - L2 LINE L2 -27 3245 3186 5170 165 18 30 chr10 78715044 78716223 -66873065 + L1MB5 LINE L1 5001 6173 -1 2518 73 0 0 chr10 78716950 78717252 -66872036 - AluSg SINE Alu -8 302 1 32 0 0 0 chr10 78719427 78719459 -66869829 + AT_rich Low_complexity Low_complexity 1 32 0 2374 97 0 0 chr10 78720570 78720880 -66868408 + AluSg SINE Alu 1 310 0 414 0 0 0 chr10 78720933 78720979 -66868309 + (TG)n Simple_repeat Simple_repeat 1 46 0 892 184 6 54 chr10 78721004 78721172 -66868116 - FRAM SINE Alu -6 160 1 1167 107 0 39 chr10 78721623 78721801 -66867487 - AluSg/x SINE Alu 0 312 142 1031 161 33 43 chr10 78725378 78725589 -66863699 + AluJo SINE Alu 1 209 -103 1230 189 98 59 chr10 78726762 78727205 -66862083 + LTR37A LTR ERV1 7 423 -3 261 333 22 0 chr10 78727275 78727413 -66861875 + L1M1 LINE L1 5306 5446 -857 1592 185 11 25 chr10 78727413 78727699 -66861589 + AluJo SINE Alu 1 282 -30 249 57 0 0 chr10 78727705 78727740 -66861548 + (TAGA)n Simple_repeat Simple_repeat 4 38 0 1105 68 0 0 chr10 78727953 78728085 -66861203 + AluSg SINE Alu 3 134 -176 2523 71 0 0 chr10 78728085 78728395 -66860893 + AluY SINE Alu 1 310 -1 225 318 0 0 chr10 78728517 78728580 -66860708 + L1MEd LINE L1 280 342 -5777 2096 106 3 3 chr10 78728583 78728865 -66860423 + AluSx SINE Alu 1 282 -30 21 0 0 0 chr10 78729027 78729048 -66860240 + AT_rich Low_complexity Low_complexity 1 21 0 2234 92 7 14 chr10 78729121 78729416 -66859872 - AluSq SINE Alu -16 297 5 438 248 30 0 chr10 78729597 78729698 -66859590 - MER81 DNA DNA -1 113 10 33 56 0 0 chr10 78729997 78730051 -66859237 + AT_rich Low_complexity Low_complexity 1 54 0 2009 120 31 0 chr10 78730680 78730971 -66858317 + AluSq SINE Alu 1 300 -13 18385 44 0 4 chr10 78731192 78733421 -66855867 - L1P LINE L1 -3235 2911 690 6819 162 37 15 chr10 78733522 78735100 -66854188 + L1PB3 LINE L1 3888 5529 -625 2245 91 10 10 chr10 78735100 78735408 -66853880 + AluSp SINE Alu 1 308 -5 6819 162 37 15 chr10 78735408 78736040 -66853248 + L1PB3 LINE L1 5529 6146 -8 2129 107 31 0 chr10 78736040 78736330 -66852958 - AluSx SINE Alu -13 299 1 243 305 12 0 chr10 78736334 78736416 -66852872 + L1ME LINE L1 5740 5822 -299 247 346 0 0 chr10 78737079 78737160 -66852128 - Alu SINE Alu -5 296 216 4398 132 55 29 chr10 78737168 78737475 -66851813 + L1MA9 LINE L1 5509 5807 -505 2306 96 10 0 chr10 78737475 78737777 -66851511 + AluSq SINE Alu 1 305 -8 4398 132 55 29 chr10 78737777 78738240 -66851048 + L1MA9 LINE L1 5807 6299 -13 22 35 0 0 chr10 78738824 78738853 -66850435 + AT_rich Low_complexity Low_complexity 1 29 0 3296 159 68 35 chr10 78739235 78739941 -66849347 + L1MB3 LINE L1 5452 6180 -3 2469 87 0 7 chr10 78740051 78740361 -66848927 + AluSg SINE Alu 1 308 -2 836 143 32 0 chr10 78740390 78740516 -66848772 - AluJb SINE Alu -23 289 160 278 186 12 0 chr10 78740527 78740613 -66848675 + (TG)n Simple_repeat Simple_repeat 1 87 0 286 95 24 0 chr10 78740613 78740655 -66848633 - AluJb SINE Alu -173 129 87 276 100 0 0 chr10 78740668 78740708 -66848580 + (TG)n Simple_repeat Simple_repeat 2 41 0 868 122 8 0 chr10 78740708 78740831 -66848457 - AluJb SINE Alu -188 124 1 452 92 31 0 chr10 78740857 78740922 -66848366 + AluJ/FLAM SINE Alu 2 68 -244 580 335 80 26 chr10 78741265 78741578 -66847710 + MER102b DNA MER1_type 12 341 0 2257 89 4 0 chr10 78741750 78742065 -66847223 - AluSc SINE Alu 0 316 1 293 100 20 0 chr10 78742098 78742148 -66847140 + (CA)n Simple_repeat Simple_repeat 2 52 0 2274 104 0 7 chr10 78742355 78742663 -66846625 - AluSx SINE Alu -6 306 1 373 136 26 29 chr10 78742663 78742768 -66846520 + MSTD LTR MaLR 210 403 -54 237 110 76 179 chr10 78742756 78742901 -66846387 + MER113 DNA MER1_type? 87 216 -305 * 181 333 17 17 chr10 78742981 78743041 -66846247 + MIR SINE MIR 6 65 -197 1801 129 0 63 chr10 78743041 78743343 -66845945 - AluJb SINE Alu -9 303 21 367 268 88 21 chr10 78743388 78743582 -66845706 - L1MC4a LINE L1 -1547 6261 6055 914 228 155 61 chr10 78743613 78743687 -66845601 - L1MC4a LINE L1 -1828 5980 5914 2220 115 0 0 chr10 78743687 78743983 -66845305 - AluSg SINE Alu -13 297 2 914 228 155 61 chr10 78743983 78744067 -66845221 - L1MC4a LINE L1 -1894 5914 5839 1854 162 3 10 chr10 78744067 78744381 -66844907 + AluJo SINE Alu 1 312 0 914 228 155 61 chr10 78744381 78744633 -66844655 - L1MC4a LINE L1 -1969 5839 5530 557 272 36 0 chr10 78744663 78744868 -66844420 + MIR SINE MIR 74 261 -1 780 245 37 41 chr10 78745221 78745515 -66843773 + L1MC5 LINE L1 7604 7896 -65 189 0 0 0 chr10 78745570 78745591 -66843697 + (TA)n Simple_repeat Simple_repeat 1 21 0 901 116 62 0 chr10 78745699 78745828 -66843460 + AluSq/x SINE Alu 1 137 -175 2014 117 24 0 chr10 78745828 78746118 -66843170 + AluY SINE Alu 1 297 -14 2189 104 10 10 chr10 78746118 78746416 -66842872 + AluSx SINE Alu 1 298 -14 2323 95 3 3 chr10 78746811 78747117 -66842171 - AluSq SINE Alu -7 306 1 1832 158 3 7 chr10 78747444 78747728 -66841560 - AluJo SINE Alu -25 287 5 2113 128 7 0 chr10 78747948 78748238 -66841050 - AluSx SINE Alu -20 292 1 231 36 0 0 chr10 78749002 78749030 -66840258 + (TA)n Simple_repeat Simple_repeat 2 29 0 1870 130 14 4 chr10 78749032 78749309 -66839979 - AluSx SINE Alu -32 280 1 222 37 0 0 chr10 78749318 78749345 -66839943 + (A)n Simple_repeat Simple_repeat 1 27 0 2341 95 0 0 chr10 78749756 78750060 -66839228 + AluSx SINE Alu 1 304 -8 1442 92 0 10 chr10 78750669 78750875 -66838413 + AluY SINE Alu 1 204 -107 472 98 0 0 chr10 78750917 78750978 -66838310 - Alu SINE Alu -248 62 2 728 226 0 0 chr10 78750983 78751147 -66838141 - L1MCb LINE L1 -3769 2795 2632 2216 114 3 3 chr10 78751147 78751455 -66837833 - AluSq SINE Alu -4 309 2 2063 133 0 10 chr10 78751578 78751880 -66837408 - AluSx SINE Alu -13 299 1 340 248 50 92 chr10 78751931 78752149 -66837139 - L1MC4a LINE L1 -1834 5974 5766 2326 53 40 17 chr10 78752203 78752504 -66836784 + AluY SINE Alu 1 308 -3 459 265 5 112 chr10 78752793 78752918 -66836370 + MER5B DNA MER1_type 4 102 -76 1834 152 17 13 chr10 78752918 78753220 -66836068 - AluJo SINE Alu -9 303 1 459 265 5 112 chr10 78753220 78753290 -66835998 + MER5B DNA MER1_type 102 178 0 219 283 0 0 chr10 78753401 78753461 -66835827 + (TAG)n Simple_repeat Simple_repeat 3 62 0 900 239 82 101 chr10 78753801 78753886 -66835402 - MLT1J LTR MaLR -18 493 408 1415 173 32 67 chr10 78753886 78754198 -66835090 + AluJo SINE Alu 1 301 -11 2419 85 0 0 chr10 78754201 78754494 -66834794 + AluSc SINE Alu 1 293 -16 900 239 82 101 chr10 78754494 78754907 -66834381 - MLT1J LTR MaLR -105 406 1 375 136 18 136 chr10 78754982 78755092 -66834196 - L1MC2 LINE L1 -1 6343 6247 374 194 0 14 chr10 78755089 78755161 -66834127 - L1M4 LINE L1 -2343 3803 3733 * 4404 213 50 16 chr10 78755159 78757120 -66832168 - L1MCb LINE L1 -4504 2241 13 468 218 41 11 chr10 78757177 78757312 -66831976 - L1MC4a LINE L1 -442 5679 5535 1523 199 10 10 chr10 78757389 78757681 -66831607 - AluJb SINE Alu -20 292 1 541 263 0 9 chr10 78758014 78758128 -66831160 - MER81 DNA DNA -1 113 1 268 326 67 59 chr10 78758332 78758467 -66830821 + L2 LINE L2 3122 3257 -15 2407 97 0 0 chr10 78758611 78758909 -66830379 - AluSg SINE Alu -12 298 1 494 320 21 5 chr10 78759126 78759320 -66829968 - MER117 DNA MER1_type 0 197 1 192 40 0 0 chr10 78759546 78759571 -66829717 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 15097 23 0 0 chr10 78759578 78762006 -66827282 - L1PA3 LINE L1 -3 6152 3725 1257 178 8 106 chr10 78762276 78762334 -66826954 - MER8 DNA MER2_type 0 239 177 1704 113 116 22 chr10 78762334 78762609 -66826679 - AluSx SINE Alu -11 301 1 1257 178 8 106 chr10 78762609 78762623 -66826665 - MER8 DNA MER2_type -62 177 163 2223 118 7 0 chr10 78762623 78762919 -66826369 - AluSg SINE Alu -12 298 1 1257 178 8 106 chr10 78762919 78763109 -66826179 - MER8 DNA MER2_type -76 163 2 1974 153 7 0 chr10 78763113 78763408 -66825880 - AluSx SINE Alu -15 297 1 8847 148 123 51 chr10 78763607 78765243 -66824045 - MER52A LTR ERV1 0 1755 1 266 329 113 58 chr10 78765555 78765847 -66823441 - L2 LINE L2 -12 3260 2953 1428 196 50 37 chr10 78765880 78766262 -66823026 + L1M4 LINE L1 4807 5193 -953 557 149 32 0 chr10 78766241 78766335 -66822953 + L1MB8 LINE L1 5877 5973 -205 * 546 165 52 0 chr10 78766340 78766437 -66822851 + L1MB8 LINE L1 6072 6173 -5 855 236 14 83 chr10 78766537 78766813 -66822475 + AluJo SINE Alu 21 277 -35 397 162 68 34 chr10 78766813 78766841 -66822447 + L1M4 LINE L1 5175 5201 -945 2100 139 10 0 chr10 78766841 78767150 -66822138 + AluSx SINE Alu 1 312 0 397 162 68 34 chr10 78767150 78767238 -66822050 + L1M4 LINE L1 5201 5295 -851 * 665 224 82 0 chr10 78767236 78767406 -66821882 + L1PB4 LINE L1 5866 6049 -107 607 158 0 20 chr10 78767549 78767650 -66821638 - AluJ/FLAM SINE Alu -212 100 2 754 290 33 67 chr10 78767678 78767806 -66821482 - L2 LINE L2 -341 2973 2842 2431 77 0 3 chr10 78767806 78768106 -66821182 + AluY SINE Alu 1 299 -12 754 290 33 67 chr10 78768106 78768277 -66821011 - L2 LINE L2 -472 2842 2684 1029 168 30 44 chr10 78768277 78768480 -66820808 - MER20 DNA MER1_type 0 219 20 1975 127 23 16 chr10 78768526 78768659 -66820629 + AluSx SINE Alu 1 132 -180 2455 89 0 13 chr10 78768659 78768974 -66820314 + AluY SINE Alu 1 311 0 1975 127 23 16 chr10 78768974 78769147 -66820141 + AluSx SINE Alu 132 309 -3 1980 108 24 24 chr10 78769240 78769536 -66819752 + AluSx SINE Alu 1 296 -16 247 280 81 66 chr10 78769744 78769955 -66819333 - L2 LINE L2 -1001 2313 2100 887 136 71 0 chr10 78770225 78770379 -66818909 - MER5A DNA MER1_type -10 179 15 588 306 82 36 chr10 78771221 78771440 -66817848 + L2 LINE L2 3032 3260 -12 2079 106 58 0 chr10 78771710 78772002 -66817286 - AluSx SINE Alu -3 309 1 2514 60 0 19 chr10 78773575 78773892 -66815396 + AluY SINE Alu 1 311 0 277 140 0 70 chr10 78773903 78773960 -66815328 + L2 LINE L2 3167 3219 -94 198 380 20 10 chr10 78774492 78774592 -66814696 + L2 LINE L2 2549 2649 -665 186 296 19 0 chr10 78774651 78774705 -66814583 - L2 LINE L2 -4 3268 3214 3134 156 89 19 chr10 78774754 78775247 -66814041 - L1MB7 LINE L1 -5 6173 5716 796 178 0 22 chr10 78775247 78775382 -66813906 - FLAM_C SINE Alu -1 132 1 3134 156 89 19 chr10 78775382 78775744 -66813544 - L1MB7 LINE L1 -462 5716 5215 1690 140 79 0 chr10 78775744 78776022 -66813266 - AluJo SINE Alu -12 300 1 23 0 0 0 chr10 78776350 78776373 -66812915 + AT_rich Low_complexity Low_complexity 1 23 0 2250 102 0 7 chr10 78777160 78777463 -66811825 - AluSq SINE Alu -12 301 1 332 309 51 67 chr10 78777657 78777835 -66811453 - MIR3 SINE MIR -15 193 19 525 176 37 139 chr10 78778143 78778238 -66811050 + L1MC5 LINE L1 7609 7712 -249 2238 89 0 48 chr10 78778238 78778551 -66810737 + AluSx SINE Alu 1 298 -14 525 176 37 139 chr10 78778551 78778644 -66810644 + L1MC5 LINE L1 7712 7769 -192 1390 194 79 7 chr10 78778644 78778922 -66810366 + AluJb SINE Alu 1 298 -14 525 176 37 139 chr10 78778922 78778977 -66810311 + L1MC5 LINE L1 7769 7828 -133 2306 74 3 14 chr10 78778979 78779275 -66810013 + AluY SINE Alu 7 299 -12 343 307 55 31 chr10 78779334 78779461 -66809827 - L2 LINE L2 -25 3247 3118 826 296 180 26 chr10 78779461 78779921 -66809367 - L2 LINE L2 -5 3308 2782 1970 117 4 4 chr10 78780289 78780562 -66808726 - AluSx SINE Alu -39 273 1 2323 103 0 3 chr10 78780571 78780881 -66808407 - AluSc SINE Alu 0 309 1 1385 258 38 49 chr10 78781082 78781532 -66807756 - MLT1J2 LTR MaLR -4 446 2 21 0 0 0 chr10 78781605 78781626 -66807662 + AT_rich Low_complexity Low_complexity 1 21 0 1990 153 7 0 chr10 78782665 78782959 -66806329 + AluSx SINE Alu 1 296 -16 215 326 41 31 chr10 78783711 78783809 -66805479 - L2 LINE L2 -26 3287 3189 866 108 0 0 chr10 78783994 78784105 -66805183 + HY1 scRNA scRNA 1 111 -1 551 313 89 80 chr10 78784105 78784809 -66804479 - L2 LINE L2 -357 2957 2247 264 266 138 87 chr10 78784880 78785098 -66804190 + L2 LINE L2 2997 3225 -47 487 240 67 109 chr10 78785748 78785839 -66803449 + MER112 DNA MER1_type 1 94 -162 2245 98 7 0 chr10 78785839 78786136 -66803152 + AluSp SINE Alu 1 299 -14 487 240 67 109 chr10 78786136 78786311 -66802977 + MER112 DNA MER1_type 94 256 0 2454 75 0 13 chr10 78786320 78786628 -66802660 + AluY SINE Alu 5 308 -3 321 238 43 70 chr10 78786775 78786960 -66802328 - L1MC5 LINE L1 -50 7911 7732 229 285 133 26 chr10 78787257 78787408 -66801880 + MIR SINE MIR 71 237 -25 300 344 47 31 chr10 78787519 78787647 -66801641 + L2 LINE L2 3102 3231 -41 212 365 35 0 chr10 78787684 78787769 -66801519 - L2 LINE L2 -640 2674 2587 1998 128 17 3 chr10 78788068 78788356 -66800932 + AluJb SINE Alu 4 295 -17 3515 126 32 27 chr10 78788625 78788770 -66800518 - MER1A DNA MER1_type -2173 527 384 2068 107 10 7 chr10 78788770 78789061 -66800227 - AluSg SINE Alu -18 292 1 3515 126 32 27 chr10 78789061 78789439 -66799849 - MER1A DNA MER1_type -2316 384 1 240 238 71 16 chr10 78790193 78790319 -66798969 + L1ME4a LINE L1 5831 5963 -158 718 75 0 0 chr10 78790455 78790549 -66798739 + AluY SINE Alu 216 309 -2 455 290 149 78 chr10 78791055 78791451 -66797837 + L1MEd LINE L1 71 494 -5625 759 271 48 43 chr10 78791457 78791829 -66797459 + L1MEd LINE L1 2659 3032 -3097 3679 190 77 52 chr10 78791835 78792828 -66796460 + L1MDa LINE L1 26 1123 -5413 2090 142 3 0 chr10 78792828 78793137 -66796151 + AluSg SINE Alu 1 310 0 2059 135 0 0 chr10 78793141 78793442 -66795846 + AluSx SINE Alu 1 301 0 1874 127 47 33 chr10 78793755 78794055 -66795233 - AluSx SINE Alu -8 304 1 3030 190 116 6 chr10 78794822 78795485 -66793803 + L1MC4a LINE L1 7073 7808 0 1814 148 7 4 chr10 78795538 78795816 -66793472 - AluJo SINE Alu -16 296 18 310 115 0 0 chr10 78796025 78796077 -66793211 - Charlie5 DNA MER1_type -100 2512 2461 236 192 55 0 chr10 78796613 78796686 -66792602 - L1MC4 LINE L1 -1339 6703 6627 2339 82 7 13 chr10 78796797 78797103 -66792185 + AluSc SINE Alu 1 304 -5 1829 151 0 20 chr10 78797236 78797528 -66791760 + AluJo SINE Alu 1 286 -26 471 290 75 78 chr10 78797565 78797820 -66791468 - L3 LINE CR1 -6 1571 1318 17607 46 1 3 chr10 78797862 78800399 -66788889 + L1P2 LINE L1 3244 5776 -378 1206 156 113 91 chr10 78800895 78801170 -66788118 + AluJo SINE Alu 1 281 -31 828 151 0 0 chr10 78801205 78801351 -66787937 + GA-rich Low_complexity Low_complexity 2 147 0 22 0 0 0 chr10 78802298 78802320 -66786968 + AT_rich Low_complexity Low_complexity 1 22 0 897 184 16 27 chr10 78803437 78803622 -66785666 - AluJb SINE Alu -16 296 114 3081 159 62 38 chr10 78803764 78803802 -66785486 + L1MB8 LINE L1 5530 5566 -612 2249 99 3 3 chr10 78803802 78804106 -66785182 + AluSp SINE Alu 2 305 -8 3081 159 62 38 chr10 78804106 78804220 -66785068 + L1MB8 LINE L1 5566 5676 -502 2377 83 7 0 chr10 78804220 78804522 -66784766 + AluY SINE Alu 1 304 -7 3081 159 62 38 chr10 78804522 78805002 -66784286 + L1MB8 LINE L1 5676 6178 0 207 0 0 0 chr10 78805279 78805302 -66783986 + (A)n Simple_repeat Simple_repeat 1 23 0 3436 175 247 25 chr10 78805618 78806184 -66783104 + MSTA-int LTR MaLR 602 1041 -610 1995 142 3 7 chr10 78806184 78806480 -66782808 + AluSx SINE Alu 6 300 -12 3436 175 247 25 chr10 78806480 78806796 -66782492 + MSTA-int LTR MaLR 1041 1651 0 2183 129 30 6 chr10 78806796 78807159 -66782129 + MSTA LTR MaLR 1 372 -56 904 176 0 57 chr10 78807160 78807336 -66781952 - FRAM SINE Alu 0 166 1 187 391 70 39 chr10 78807385 78807641 -66781647 - L2 LINE L2 -2005 1309 1046 2048 150 0 7 chr10 78807681 78807987 -66781301 + AluSx SINE Alu 1 304 -8 2271 97 0 3 chr10 78808664 78808954 -66780334 - AluSc SINE Alu -20 289 1 2177 119 16 0 chr10 78809004 78809307 -66779981 - AluSx SINE Alu -4 308 1 441 234 77 17 chr10 78810844 78810964 -66778324 - MIR3 SINE MIR -7 201 72 2213 101 0 7 chr10 78812711 78813007 -66776281 - AluSx SINE Alu -18 294 1 283 345 124 0 chr10 78813636 78813749 -66775539 - MIR3 SINE MIR -23 185 59 327 307 158 51 chr10 78813793 78814204 -66775084 + L1MC/D LINE L1 3791 4245 -1901 834 213 12 0 chr10 78814343 78814503 -66774785 + AluSg/x SINE Alu 137 298 -12 2626 36 0 3 chr10 78814618 78814923 -66774365 + AluYa5 SINE Alu 1 304 -7 241 340 37 5 chr10 78815238 78815426 -66773862 + L1MC/D LINE L1 5395 5588 -771 808 142 0 37 chr10 78815633 78815767 -66773521 - FLAM_C SINE Alu -14 129 1 31 68 0 0 chr10 78815962 78816021 -66773267 + AT_rich Low_complexity Low_complexity 1 59 0 2196 98 0 39 chr10 78817081 78817387 -66771901 - AluSg SINE Alu -16 294 1 223 347 46 63 chr10 78817515 78817754 -66771534 + L2 LINE L2 2043 2277 -1037 2422 41 7 7 chr10 78817784 78818074 -66771214 - AluY SINE Alu -21 290 1 537 262 40 8 chr10 78818106 78818232 -66771056 + L2 LINE L2 3180 3309 -4 2109 97 4 7 chr10 78818388 78818667 -66770621 + AluSc SINE Alu 18 295 -14 1824 145 16 35 chr10 78818709 78819019 -66770269 + AluJo SINE Alu 1 304 -8 575 300 50 50 chr10 78819392 78819583 -66769705 + L1ME4a LINE L1 5321 5514 -607 3825 156 36 52 chr10 78819583 78820378 -66768910 - LTR39 LTR ERV1 0 783 1 575 300 50 50 chr10 78820378 78820566 -66768722 + L1ME4a LINE L1 5513 5700 -421 624 306 38 34 chr10 78820584 78820819 -66768469 + MIR SINE MIR 1 236 -26 318 271 51 25 chr10 78820835 78820953 -66768335 + L1ME4a LINE L1 5776 5896 -225 404 77 15 15 chr10 78821226 78821291 -66767997 - LTR35 LTR ERV1 -553 65 1 1116 167 48 13 chr10 78821291 78821519 -66767769 - MSTB LTR MaLR -150 276 41 283 185 0 0 chr10 78821577 78821631 -66767657 - MSTB LTR MaLR -372 54 1 931 231 20 16 chr10 78821681 78821984 -66767304 + L1M4c LINE L1 1300 1603 -4781 1335 130 5 5 chr10 78822020 78822212 -66767076 + AluSx SINE Alu 1 192 -120 2240 78 25 0 chr10 78822400 78822684 -66766604 - AluY SINE Alu -20 291 1 2203 103 0 10 chr10 78822691 78822981 -66766307 - AluSg SINE Alu -23 287 1 1878 138 3 52 chr10 78823411 78823716 -66765572 + AluSx SINE Alu 9 298 -14 706 177 43 52 chr10 78823736 78823968 -66765320 + L1MC5 LINE L1 7688 7917 -44 802 219 0 0 chr10 78823976 78824127 -66765161 - FAM SINE Alu -15 170 20 820 242 0 0 chr10 78824166 78824327 -66764961 + FRAM SINE Alu 1 158 -18 315 350 119 25 chr10 78824671 78824914 -66764374 + L3b LINE CR1 1102 1367 -216 211 287 46 23 chr10 78824875 78824962 -66764326 + MIR3 SINE MIR 119 207 -1 * 181 266 38 38 chr10 78825013 78825092 -66764196 + L3b LINE CR1 1334 1412 -171 21 36 0 0 chr10 78825796 78825824 -66763464 + AT_rich Low_complexity Low_complexity 1 28 0 29 28 0 0 chr10 78826270 78826306 -66762982 + AT_rich Low_complexity Low_complexity 1 36 0 301 336 115 0 chr10 78827164 78827286 -66762002 + MIR SINE MIR 28 163 -99 1774 159 7 3 chr10 78828019 78828309 -66760979 + AluSx SINE Alu 5 295 -17 21 0 0 0 chr10 78829367 78829388 -66759900 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr10 78830534 78830554 -66758734 + (CAGA)n Simple_repeat Simple_repeat 1 20 0 394 224 155 14 chr10 78830555 78830751 -66758537 + L1MD2 LINE L1 5938 6143 -28 2049 141 3 3 chr10 78830967 78831273 -66758015 + AluSx SINE Alu 1 306 -6 2145 103 20 3 chr10 78832126 78832428 -66756860 + AluSx SINE Alu 1 307 -5 2345 82 7 0 chr10 78832802 78833095 -66756193 - AluSq SINE Alu -18 295 1 1783 147 0 37 chr10 78833190 78833490 -66755798 - AluSx SINE Alu -19 293 5 523 267 30 0 chr10 78833895 78834026 -66755262 + L2 LINE L2 3179 3313 0 642 251 192 0 chr10 78834128 78834347 -66754941 - MIR SINE MIR 0 262 2 21 36 0 0 chr10 78834448 78834476 -66754812 + AT_rich Low_complexity Low_complexity 1 28 0 1713 165 14 14 chr10 78834618 78834909 -66754379 - AluJb SINE Alu -17 295 5 2324 93 0 7 chr10 78835091 78835392 -66753896 + AluSx SINE Alu 3 301 -11 836 237 109 5 chr10 78835780 78835991 -66753297 + MIR SINE MIR 14 246 -16 523 280 69 26 chr10 78836011 78836315 -66752973 + L1ME4a LINE L1 5617 5933 -188 1877 181 3 3 chr10 78836389 78836699 -66752589 + AluJb SINE Alu 1 310 -2 644 219 0 0 chr10 78838635 78838758 -66750530 + FLAM_A SINE Alu 1 123 -10 1271 109 0 0 chr10 78839196 78839361 -66749927 - AluSg/x SINE Alu -10 302 138 878 195 0 6 chr10 78839500 78839664 -66749624 + AluY SINE Alu 140 302 -9 500 239 123 46 chr10 78839833 78839997 -66749291 - L1ME4a LINE L1 -207 5914 5721 2048 99 6 57 chr10 78839997 78840311 -66748977 - AluSx SINE Alu -14 298 1 500 239 123 46 chr10 78840311 78840406 -66748882 - L1ME4a LINE L1 -400 5721 5635 1051 200 0 0 chr10 78840433 78840603 -66748685 - AluJb SINE Alu -12 300 131 971 192 0 12 chr10 78840791 78840963 -66748325 + FAM SINE Alu 1 170 -5 1797 163 7 3 chr10 78841037 78841326 -66747962 + AluJb SINE Alu 1 290 -22 2489 81 3 0 chr10 78841430 78841739 -66747549 + AluSp SINE Alu 1 310 -3 335 82 0 0 chr10 78841739 78841788 -66747500 + AluSg/x SINE Alu 83 131 -169 2352 82 3 0 chr10 78841791 78842085 -66747203 + AluSg SINE Alu 1 295 -15 268 282 32 24 chr10 78842085 78842209 -66747079 - L1MC5 LINE L1 -581 7380 7256 186 274 202 24 chr10 78842248 78842332 -66746956 - L3 LINE CR1 -24 1553 1455 2094 124 20 0 chr10 78842332 78842630 -66746658 - AluSx SINE Alu -8 304 1 1787 153 33 43 chr10 78842750 78843050 -66746238 - AluJb SINE Alu -15 297 1 2342 76 13 3 chr10 78843060 78843363 -66745925 - AluSg SINE Alu -4 306 1 376 331 71 14 chr10 78843698 78843979 -66745309 - L1ME1 LINE L1 -341 5825 5529 383 261 45 9 chr10 78844003 78844114 -66745174 + MER5A DNA MER1_type 49 163 -26 349 310 62 16 chr10 78844016 78844145 -66745143 - MER5A DNA MER1_type -50 139 5 * 271 257 27 0 chr10 78844597 78844671 -66744617 + MIR3 SINE MIR 112 187 -21 2462 70 0 0 chr10 78844865 78845167 -66744121 - AluY SINE Alu -9 302 1 2077 106 58 0 chr10 78846740 78847032 -66742256 + AluSx SINE Alu 1 309 -3 646 290 81 36 chr10 78847302 78847523 -66741765 - L2 LINE L2 -12 3260 3030 180 0 0 0 chr10 78847777 78847797 -66741491 + (TCTCCC)n Simple_repeat Simple_repeat 3 22 0 2077 99 3 93 chr10 78847872 78848075 -66741213 - AluSx SINE Alu 0 312 151 2492 69 13 0 chr10 78848075 78848379 -66740909 - AluSg SINE Alu -2 308 1 2077 99 3 93 chr10 78848379 78848518 -66740770 - AluSx SINE Alu -161 151 1 2234 99 3 0 chr10 78848736 78849055 -66740233 + AluSp SINE Alu 1 320 0 2356 60 10 7 chr10 78850044 78850342 -66738946 + AluSq SINE Alu 1 299 -14 1883 141 0 25 chr10 78851327 78851646 -66737642 - AluJb SINE Alu -1 311 1 25 0 0 0 chr10 78851689 78851714 -66737574 + AT_rich Low_complexity Low_complexity 1 25 0 186 43 0 0 chr10 78852887 78852910 -66736378 + (CGGGGG)n Simple_repeat Simple_repeat 5 27 0 2268 75 4 4 chr10 78855314 78855624 -66733664 - AluSc SINE Alu 0 310 1 782 154 0 0 chr10 78856642 78856759 -66732529 - FLAM_C SINE Alu -15 118 2 303 138 12 88 chr10 78856868 78856948 -66732340 - MER20 DNA MER1_type -9 210 137 289 174 58 29 chr10 78857055 78857124 -66732164 - MER20 DNA MER1_type -82 137 67 181 235 0 20 chr10 78858657 78858708 -66730580 + L2 LINE L2 2603 2652 -662 700 296 180 26 chr10 78858713 78859173 -66730115 + L2 LINE L2 2782 3308 -5 300 307 55 31 chr10 78859173 78859300 -66729988 + L2 LINE L2 3118 3247 -25 403 263 15 44 chr10 78859333 78859359 -66729929 + L2 LINE L2 1963 1988 -1326 2227 96 3 16 chr10 78859359 78859662 -66729626 - AluY SINE Alu -12 299 1 403 263 15 44 chr10 78859662 78859772 -66729516 + L2 LINE L2 1988 2095 -1219 449 255 76 0 chr10 78860170 78860327 -66728961 - MIR SINE MIR -35 227 59 21 0 0 0 chr10 78860350 78860371 -66728917 + AT_rich Low_complexity Low_complexity 1 21 0 1943 124 37 0 chr10 78861018 78861335 -66727953 - AluSx SINE Alu 0 327 1 1967 195 49 62 chr10 78861336 78861574 -66727714 + L1ME4a LINE L1 4847 5086 -1270 1709 111 56 82 chr10 78861574 78861880 -66727408 - AluSx SINE Alu -12 300 3 1967 195 49 62 chr10 78861880 78862104 -66727184 + L1ME4a LINE L1 5086 5311 -1045 2184 125 0 7 chr10 78862104 78862420 -66726868 + AluSx SINE Alu 1 312 0 1967 195 49 62 chr10 78862420 78862673 -66726615 + L1ME4a LINE L1 5311 5558 -798 2040 130 23 7 chr10 78862673 78862980 -66726308 + AluSx SINE Alu 1 312 0 1967 195 49 62 chr10 78862980 78863036 -66726252 + L1ME4a LINE L1 5558 5613 -743 1926 127 0 4 chr10 78863258 78863534 -66725754 - AluSx SINE Alu -12 300 26 251 264 107 33 chr10 78863548 78863669 -66725619 - MIR SINE MIR -113 149 20 1953 145 3 23 chr10 78863741 78864051 -66725237 + AluJo SINE Alu 1 304 -8 293 302 34 34 chr10 78864738 78864887 -66724401 + L2 LINE L2 2596 2744 -570 216 0 0 0 chr10 78864887 78864911 -66724377 + (TAA)n Simple_repeat Simple_repeat 2 25 0 914 241 21 21 chr10 78864923 78865159 -66724129 - MIR SINE MIR -12 250 15 359 315 13 27 chr10 78865482 78865631 -66723657 + L2 LINE L2 3164 3310 -3 180 0 0 0 chr10 78866203 78866223 -66723065 + (TCTCCC)n Simple_repeat Simple_repeat 3 22 0 1240 135 5 0 chr10 78866298 78866483 -66722805 - AluSg/x SINE Alu 0 310 125 2538 61 13 10 chr10 78866499 78866810 -66722478 - AluSx SINE Alu 0 312 1 1807 163 7 3 chr10 78866914 78867203 -66722085 - AluJb SINE Alu -22 290 1 984 198 0 11 chr10 78867272 78867449 -66721839 - FAM SINE Alu 0 175 1 1032 200 0 0 chr10 78867637 78867807 -66721481 + AluJb SINE Alu 131 300 -12 593 241 189 52 chr10 78867834 78867929 -66721359 + L1ME4a LINE L1 5635 5716 -405 2069 99 6 57 chr10 78867929 78868243 -66721045 + AluSx SINE Alu 1 298 -14 593 241 189 52 chr10 78868243 78868549 -66720739 + L1ME4a LINE L1 5716 6091 -30 1213 155 0 15 chr10 78868576 78868776 -66720512 - AluSg/x SINE Alu -9 303 107 1704 143 4 0 chr10 78868877 78869122 -66720166 - AluSq SINE Alu -67 246 1 1901 149 10 0 chr10 78869211 78869499 -66719789 - AluSx SINE Alu -21 291 1 2509 81 3 0 chr10 78869783 78870092 -66719196 + AluSp SINE Alu 1 310 -3 370 85 7 18 chr10 78870092 78870144 -66719144 + AluSg/x SINE Alu 93 131 -169 2437 78 0 3 chr10 78870144 78870440 -66718848 + AluSg SINE Alu 1 295 -15 2384 97 3 0 chr10 78870620 78870928 -66718360 + AluSq SINE Alu 1 309 -4 287 297 47 61 chr10 78871099 78871247 -66718041 - MIR3 SINE MIR -3 205 60 2375 92 0 7 chr10 78871641 78871944 -66717344 - AluSc SINE Alu -8 301 1 2007 151 3 7 chr10 78874581 78874885 -66714403 - AluJb SINE Alu -8 304 2 771 113 0 0 chr10 78874919 78875025 -66714263 + AluJb SINE Alu 200 305 -7 226 252 37 28 chr10 78875857 78875964 -66713324 + A-rich Low_complexity Low_complexity 3 110 0 1714 98 20 8 chr10 78879735 78880027 -66709261 - AluSg SINE Alu 0 330 36 2371 103 0 0 chr10 78880353 78880664 -66708624 - AluY SINE Alu 0 311 1 1844 178 3 16 chr10 78881859 78882174 -66707114 + AluJo SINE Alu 1 311 -1 2313 94 7 7 chr10 78882331 78882628 -66706660 + AluSx SINE Alu 1 297 -15 2384 97 3 0 chr10 78882808 78883116 -66706172 + AluSq SINE Alu 1 309 -4 287 297 47 61 chr10 78883287 78883435 -66705853 - MIR3 SINE MIR -3 205 60 2375 92 0 7 chr10 78883829 78884132 -66705156 - AluSc SINE Alu -8 301 1 2007 151 3 7 chr10 78886769 78887073 -66702215 - AluJb SINE Alu -8 304 2 771 113 0 0 chr10 78887107 78887213 -66702075 + AluJb SINE Alu 200 305 -7 226 252 37 28 chr10 78888046 78888153 -66701135 + A-rich Low_complexity Low_complexity 3 110 0 2259 81 3 14 chr10 78891925 78892261 -66697027 - AluSg SINE Alu 0 333 1 982 171 63 0 chr10 78892985 78893143 -66696145 + FAM SINE Alu 1 168 -7 431 250 92 0 chr10 78893202 78893322 -66695966 + L2 LINE L2 3183 3313 0 1670 145 87 14 chr10 78893614 78893890 -66695398 + AluJb SINE Alu 1 296 -16 868 189 40 0 chr10 78894860 78895008 -66694280 + AluJb SINE Alu 137 290 -22 1094 135 17 6 chr10 78895813 78895991 -66693297 + AluSc SINE Alu 120 299 -10 1676 167 0 4 chr10 78895992 78896250 -66693038 - AluJb SINE Alu -55 257 1 1923 150 7 0 chr10 78896257 78896564 -66692724 - AluSx SINE Alu -3 309 1 1669 161 10 13 chr10 78896999 78897297 -66691991 - AluJb SINE Alu -15 297 1 2127 123 3 19 chr10 78897299 78897615 -66691673 - AluSx SINE Alu -1 311 1 599 242 0 0 chr10 78897624 78897752 -66691536 - FLAM_A SINE Alu -1 132 5 1896 125 0 25 chr10 78898509 78898789 -66690499 - AluSx SINE Alu -39 273 1 1212 131 0 11 chr10 78898920 78899095 -66690193 - AluSg/x SINE Alu -6 304 132 2384 95 0 10 chr10 78899095 78899263 -66690025 - AluSx SINE Alu -11 301 136 2260 105 0 0 chr10 78899263 78899559 -66689729 - AluSc SINE Alu -12 297 2 2384 95 0 10 chr10 78899559 78899694 -66689594 - AluSx SINE Alu -176 136 1 1898 150 0 29 chr10 78900204 78900510 -66688778 - AluSx SINE Alu -15 297 1 292 308 119 0 chr10 78900510 78900653 -66688635 + MIR SINE MIR 97 256 -6 2175 128 0 0 chr10 78900840 78901144 -66688144 - AluSg SINE Alu -6 304 1 1937 151 3 3 chr10 78901271 78901575 -66687713 - AluSx SINE Alu -8 304 1 1806 122 47 69 chr10 78901776 78902095 -66687193 - AluJb SINE Alu 0 312 1 2500 72 0 3 chr10 78902221 78902525 -66686763 - AluY SINE Alu -7 304 2 610 175 9 18 chr10 78902658 78902772 -66686516 - FLAM_A SINE Alu -17 116 4 2352 145 69 31 chr10 78902800 78902919 -66686369 - L1MB2 LINE L1 -1 6170 6057 2291 110 7 0 chr10 78902919 78903227 -66686061 - AluSx SINE Alu -2 310 1 2352 145 69 31 chr10 78903227 78903584 -66685704 - L1MB2 LINE L1 -114 6057 5676 1082 180 0 0 chr10 78903586 78903747 -66685541 - AluJb SINE Alu -20 292 132 703 174 15 15 chr10 78903759 78903891 -66685397 + FLAM_C SINE Alu 1 132 -1 276 103 103 52 chr10 78903891 78903927 -66685361 + AluY SINE Alu 133 174 -127 258 231 0 0 chr10 78903927 78903979 -66685309 + LTR30 LTR ERV1 1 52 -670 1246 92 111 74 chr10 78903979 78904196 -66685092 + LTR12 LTR ERV1 53 277 -437 341 263 10 0 chr10 78904196 78904295 -66684993 + LTR30 LTR ERV1 544 643 -79 768 110 0 0 chr10 78904297 78904397 -66684891 + LTR12 LTR ERV1 615 714 0 1044 90 0 0 chr10 78904397 78904530 -66684758 + AluY SINE Alu 165 297 -14 701 178 25 0 chr10 78904530 78904648 -66684640 - AluJo/FLAM SINE Alu -190 122 2 2086 151 56 35 chr10 78904652 78904837 -66684451 - L1MB2 LINE L1 -488 5683 5503 2301 92 3 25 chr10 78904837 78905154 -66684134 - AluSg SINE Alu 0 310 1 2086 151 56 35 chr10 78905154 78905349 -66683939 - L1MB2 LINE L1 -668 5503 5289 1887 123 0 97 chr10 78905349 78905689 -66683599 - AluSx SINE Alu -4 308 2 2086 151 56 35 chr10 78905689 78905812 -66683476 - L1MB2 LINE L1 -882 5289 5170 193 207 35 35 chr10 78906129 78906187 -66683101 + L2 LINE L2 3209 3266 -6 2373 99 10 0 chr10 78906242 78906546 -66682742 - AluSx SINE Alu -5 307 1 2372 88 0 3 chr10 78906558 78906852 -66682436 - AluY SINE Alu -18 293 1 1212 133 0 76 chr10 78908069 78908202 -66681086 - L1PA15 LINE L1 -4 6161 6048 2314 90 0 0 chr10 78908202 78908491 -66680797 - AluSq SINE Alu -24 289 1 1212 133 0 76 chr10 78908491 78908567 -66680721 - L1PA15 LINE L1 -117 6048 5968 1274 209 26 0 chr10 78908567 78908833 -66680455 - L1MD1 LINE L1 -1 6241 5967 2216 94 10 0 chr10 78908925 78909224 -66680064 + AluSp SINE Alu 1 302 -11 390 200 19 38 chr10 78909254 78909359 -66679929 + MIR SINE MIR 78 180 -82 290 312 192 66 chr10 78909500 78909849 -66679439 + L3 LINE CR1 36 428 -1149 2104 104 3 20 chr10 78910036 78910198 -66679090 - AluSg SINE Alu -17 293 137 2099 103 0 33 chr10 78910198 78910498 -66678790 - AluSc SINE Alu -19 290 1 2104 104 3 20 chr10 78910498 78910633 -66678655 - AluSg SINE Alu -173 137 1 1307 137 82 16 chr10 78910633 78910888 -66678400 - L1M4 LINE L1 -979 5167 4896 2675 148 15 44 chr10 78910888 78911035 -66678253 - MER44D DNA MER2_type -1882 605 455 2160 103 3 3 chr10 78911035 78911325 -66677963 - AluSx SINE Alu -22 290 1 2675 148 15 44 chr10 78911325 78911352 -66677936 - MER44D DNA MER2_type -2032 455 429 3893 157 16 67 chr10 78911352 78912080 -66677208 - LTR8 LTR ERV1 0 691 1 2675 148 15 44 chr10 78912080 78912377 -66676911 - MER44D DNA MER2_type -2058 429 275 2219 119 0 22 chr10 78912378 78912560 -66676728 - AluSx SINE Alu 0 312 138 2465 61 0 7 chr10 78912560 78912853 -66676435 - AluY SINE Alu -20 291 1 2219 119 0 22 chr10 78912853 78912989 -66676299 - AluSx SINE Alu -174 138 1 2339 93 0 7 chr10 78912991 78913301 -66675987 - AluSx SINE Alu -4 308 1 541 111 14 0 chr10 78913827 78913899 -66675389 + 7SLRNA srpRNA srpRNA 237 309 -11 2262 98 0 31 chr10 78913907 78914225 -66675063 + AluSx SINE Alu 5 312 0 1075 163 20 25 chr10 78914509 78914712 -66674576 + AluJo SINE Alu 86 287 -25 2195 126 0 0 chr10 78914758 78915051 -66674237 + AluSx SINE Alu 1 293 -19 1862 130 6 61 chr10 78915722 78916052 -66673236 - AluJb SINE Alu 0 312 1 189 0 0 0 chr10 78916636 78916657 -66672631 + (T)n Simple_repeat Simple_repeat 1 21 0 22 0 0 0 chr10 78918616 78918638 -66670650 + AT_rich Low_complexity Low_complexity 1 22 0 233 234 117 54 chr10 78918826 78918937 -66670351 - MIR SINE MIR -13 249 132 315 363 37 0 chr10 78918966 78919101 -66670187 + MIR SINE MIR 123 262 0 * 337 204 163 10 chr10 78919086 78919184 -66670104 - MIR SINE MIR -98 164 52 2261 97 7 13 chr10 78920605 78920914 -66668374 + AluSx SINE Alu 1 307 -5 189 121 0 0 chr10 78921274 78921307 -66667981 + (CAT)n Simple_repeat Simple_repeat 3 35 0 564 283 42 26 chr10 78921308 78921499 -66667789 - MIR SINE MIR -10 252 59 2376 71 0 7 chr10 78921640 78921937 -66667351 - AluY SINE Alu -16 295 1 207 355 8 16 chr10 78922845 78922966 -66666322 - L2 LINE L2 -338 2975 2856 2255 78 35 0 chr10 78923106 78923389 -66665899 - AluSc SINE Alu -16 293 1 2296 144 103 10 chr10 78923467 78923856 -66665432 + MSTB LTR MaLR 1 425 -1 2285 90 3 0 chr10 78924730 78925019 -66664269 - AluSg SINE Alu -17 293 4 543 183 226 18 chr10 78925165 78925329 -66663959 - L1MD3 LINE L1 -29 7966 7769 1071 172 17 78 chr10 78925360 78925544 -66663744 - AluJo SINE Alu -9 303 134 2218 113 0 0 chr10 78925544 78925836 -66663452 + AluSq SINE Alu 1 292 -21 1071 172 17 78 chr10 78925836 78925883 -66663405 - AluJo SINE Alu -178 134 86 1837 188 21 44 chr10 78925886 78926316 -66662972 - L1MC4a LINE L1 -201 7607 7188 2111 82 13 59 chr10 78926434 78926740 -66662548 + AluSx SINE Alu 5 296 -16 664 242 73 12 chr10 78927515 78927680 -66661608 - MER69A DNA AcHobo -2 175 1 552 186 29 0 chr10 78927881 78927983 -66661305 - AluJ SINE Alu -206 106 2 299 198 27 72 chr10 78927988 78928052 -66661236 - L1ME LINE L1 -504 5662 5604 2062 153 6 57 chr10 78928052 78928252 -66661036 - MER7A DNA MER2_type -2692 346 173 2141 97 0 21 chr10 78928252 78928565 -66660723 + AluSq SINE Alu 2 308 0 2062 153 6 57 chr10 78928565 78928729 -66660559 - MER7A DNA MER2_type -2865 173 2 299 198 27 72 chr10 78928729 78928775 -66660513 - L1ME LINE L1 -562 5604 5557 188 67 33 0 chr10 78928902 78928932 -66660356 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 1277 300 53 31 chr10 78928942 78929103 -66660185 + L1ME3A LINE L1 5318 5474 -696 1658 179 10 14 chr10 78929103 78929400 -66659888 + AluJo SINE Alu 2 297 -15 1277 300 53 31 chr10 78929400 78929858 -66659430 + L1ME3A LINE L1 5474 5951 -219 1206 144 0 11 chr10 78930225 78930405 -66658883 - AluSg/x SINE Alu -1 309 132 263 361 67 8 chr10 78930745 78930864 -66658424 + L2 LINE L2 2922 3047 -225 33 0 0 0 chr10 78930864 78930897 -66658391 + AT_rich Low_complexity Low_complexity 1 33 0 796 172 0 0 chr10 78930898 78931014 -66658274 - FLAM_C SINE Alu -17 116 1 194 250 0 58 chr10 78931123 78931175 -66658113 + L2 LINE L2 3239 3287 -26 2472 81 0 7 chr10 78931224 78931532 -66657756 - AluSg SINE Alu -2 308 3 2579 47 0 31 chr10 78931667 78931984 -66657304 - AluY SINE Alu -4 307 1 1581 129 100 22 chr10 78932304 78932575 -66656713 - AluSx SINE Alu -20 292 1 1942 120 0 69 chr10 78932615 78932793 -66656495 - AluSx SINE Alu -15 297 149 2251 98 3 0 chr10 78932793 78933080 -66656208 - AluSp SINE Alu -25 288 1 1942 120 0 69 chr10 78933080 78933218 -66656070 - AluSx SINE Alu -163 149 3 1193 99 89 0 chr10 78933287 78933478 -66655810 + Tigger2 DNA MER2_type 1 208 -2510 773 191 64 0 chr10 78933485 78933626 -66655662 + Tigger2 DNA MER2_type 2568 2717 -1 2242 87 10 7 chr10 78934183 78934482 -66654806 + AluSc SINE Alu 5 304 -5 2338 64 7 0 chr10 78934587 78934869 -66654419 + AluSx SINE Alu 16 299 -13 1146 105 12 6 chr10 78934869 78935031 -66654257 + AluSg/x SINE Alu 132 294 -16 2305 93 0 13 chr10 78935715 78936026 -66653262 + AluSg1 SINE Alu 3 309 0 211 329 66 42 chr10 78936115 78936282 -66653006 - L3b LINE CR1 -97 1486 1316 861 188 32 97 chr10 78937172 78937249 -66652039 + L1MC5 LINE L1 7625 7705 -256 1624 174 67 0 chr10 78937249 78937519 -66651769 - AluJo SINE Alu -24 288 1 861 188 32 97 chr10 78937519 78937749 -66651539 + L1MC5 LINE L1 7705 7912 -49 2250 116 0 0 chr10 78939547 78939849 -66649439 - AluSx SINE Alu -10 302 1 651 243 44 48 chr10 78939859 78939870 -66649418 - MIR SINE MIR -57 205 195 189 0 0 0 chr10 78939870 78939891 -66649397 + (TG)n Simple_repeat Simple_repeat 2 22 0 651 243 44 48 chr10 78939891 78939929 -66649359 - MIR SINE MIR -67 195 158 1645 112 0 0 chr10 78939929 78940144 -66649144 - AluSg/x SINE Alu -14 296 82 651 243 44 48 chr10 78940144 78940299 -66648989 - MIR SINE MIR -104 158 1 844 193 80 11 chr10 78940315 78940502 -66648786 - MER105 DNA DNA -3 201 2 2295 79 7 0 chr10 78941242 78941533 -66647755 - AluY SINE Alu -18 293 1 2493 241 122 72 chr10 78941710 78942134 -66647154 - L2 LINE L2 0 3313 2911 2107 140 0 3 chr10 78942134 78942441 -66646847 + AluSx SINE Alu 1 306 -6 2493 241 122 72 chr10 78942441 78942992 -66646296 - L2 LINE L2 -402 2911 2228 241 143 0 0 chr10 78942992 78943027 -66646261 - MADE1 DNA Mariner 0 80 46 2493 241 122 72 chr10 78943027 78943349 -66645939 - L2 LINE L2 -1085 2228 1923 21 57 0 0 chr10 78943450 78943485 -66645803 + AT_rich Low_complexity Low_complexity 1 35 0 7713 39 4 1 chr10 78943485 78944983 -66644305 - L1PA6 LINE L1 -13 6141 4635 1421 112 5 0 chr10 78944985 78945181 -66644107 - AluSx SINE Alu -56 256 60 422 286 42 24 chr10 78945500 78945713 -66643575 + L1ME2 LINE L1 5713 5929 -235 1590 151 66 40 chr10 78945725 78946029 -66643259 + AluJb SINE Alu 1 312 0 216 259 63 98 chr10 78947039 78947182 -66642106 + MER5A DNA MER1_type 34 171 -18 2296 120 0 0 chr10 78947348 78947656 -66641632 + AluSg SINE Alu 1 308 -2 3352 170 102 55 chr10 78947717 78948130 -66641158 + L1MD2 LINE L1 5513 5905 -454 2139 106 0 0 chr10 78948130 78948413 -66640875 + AluSx SINE Alu 14 296 -16 3352 170 102 55 chr10 78948413 78948695 -66640593 + L1MD2 LINE L1 5905 6254 -105 2650 46 0 0 chr10 78948695 78949002 -66640286 + AluY SINE Alu 2 308 -3 3352 170 102 55 chr10 78949002 78949112 -66640176 + L1MD2 LINE L1 6254 6357 -2 1269 191 7 34 chr10 78949613 78949907 -66639381 - AluSx SINE Alu -14 298 13 313 336 16 16 chr10 78949964 78950121 -66639167 + CT-rich Low_complexity Low_complexity 1 157 0 204 211 40 0 chr10 78950148 78950224 -66639064 + CT-rich Low_complexity Low_complexity 1 79 0 285 312 0 11 chr10 78950250 78950343 -66638945 + CT-rich Low_complexity Low_complexity 2 93 0 2133 113 0 7 chr10 78950491 78950806 -66638482 + AluSx SINE Alu 1 313 0 2445 87 3 0 chr10 78950909 78951218 -66638070 - AluSg SINE Alu 0 310 1 1014 221 46 103 chr10 78951280 78951418 -66637870 - L1ME3A LINE L1 -225 5945 5801 2438 82 3 0 chr10 78951418 78951721 -66637567 - AluSp SINE Alu -9 304 1 1014 221 46 103 chr10 78951721 78952017 -66637271 - L1ME3A LINE L1 -369 5801 5536 1710 185 4 0 chr10 78952132 78952435 -66636853 - AluJo SINE Alu 0 304 1 560 316 91 47 chr10 78952435 78952589 -66636699 - MLT1I LTR MaLR -9 400 254 1374 188 34 45 chr10 78952589 78952881 -66636407 - AluJo SINE Alu -23 289 1 560 316 91 47 chr10 78952881 78953109 -66636179 - MLT1I LTR MaLR -155 254 1 892 254 111 51 chr10 78953111 78953381 -66635907 + L1MC/D LINE L1 4723 4975 -1264 1845 148 4 0 chr10 78953381 78953652 -66635636 + AluJo SINE Alu 12 283 -29 892 254 111 51 chr10 78953652 78953934 -66635354 + L1MC/D LINE L1 4975 5333 -906 2267 92 3 0 chr10 78953934 78954246 -66635042 + AluSp SINE Alu 1 313 0 892 254 111 51 chr10 78954246 78954412 -66634876 + L1MC/D LINE L1 5333 5488 -751 690 177 28 55 chr10 78954421 78954602 -66634686 + AluJo SINE Alu 2 177 -135 1058 124 4 85 chr10 78954710 78954969 -66634319 - AluY SINE Alu -73 238 1 2097 213 42 30 chr10 78955143 78955519 -66633769 + L1MC5 LINE L1 7300 7687 -274 2450 48 7 3 chr10 78955519 78955810 -66633478 + AluY SINE Alu 1 292 -19 2097 213 42 30 chr10 78955810 78956058 -66633230 + L1MC5 LINE L1 7687 7931 -30 2251 80 0 58 chr10 78956695 78957020 -66632268 - AluY SINE Alu -5 306 1 741 184 0 0 chr10 78958224 78958338 -66630950 - FLAM_A SINE Alu -19 114 1 235 187 187 27 chr10 78958847 78958922 -66630366 + L1PBa LINE L1 807 893 -5970 23 0 0 0 chr10 78960245 78960268 -66629020 + AT_rich Low_complexity Low_complexity 1 23 0 2080 122 0 0 chr10 78960417 78960713 -66628575 + AluSx SINE Alu 1 296 -16 1418 154 47 50 chr10 78961027 78961326 -66627962 + AluJb SINE Alu 1 298 -14 2189 120 0 0 chr10 78961495 78961804 -66627484 + AluSg SINE Alu 2 310 0 455 229 0 59 chr10 78962250 78962343 -66626945 + AluJo SINE Alu 26 113 -199 1648 144 72 0 chr10 78962343 78962633 -66626655 + AluSx SINE Alu 1 309 0 455 229 0 59 chr10 78962633 78962656 -66626632 + AluJo SINE Alu 113 136 -176 2185 96 0 0 chr10 78962788 78963090 -66626198 + AluY SINE Alu 1 302 -9 958 132 35 0 chr10 78963094 78963238 -66626050 - FAM SINE Alu -16 169 21 1916 132 3 3 chr10 78964610 78964899 -66624389 - AluSx SINE Alu -23 289 1 385 130 28 0 chr10 78964920 78964995 -66624293 + Alu SINE Alu 1 55 -248 291 151 0 0 chr10 78965140 78965162 -66624126 + (TAA)n Simple_repeat Simple_repeat 2 23 -31 2222 80 0 0 chr10 78965162 78965449 -66623839 + AluSq SINE Alu 1 287 -26 291 151 0 0 chr10 78965449 78965479 -66623809 + (TAA)n Simple_repeat Simple_repeat 22 54 0 966 240 39 4 chr10 78965516 78965749 -66623539 - MIR SINE MIR -10 252 12 344 185 69 150 chr10 78965909 78966082 -66623206 + L1ME4a LINE L1 5850 6008 -113 2157 79 7 3 chr10 78967121 78967411 -66621877 - AluSx SINE Alu -21 291 1 231 221 130 52 chr10 78967819 78967896 -66621392 + L2 LINE L2 3189 3271 -1 2255 90 3 7 chr10 78968082 78968392 -66620896 + AluSc SINE Alu 1 309 0 801 194 0 0 chr10 78968580 78968719 -66620569 + FLAM_C SINE Alu 3 141 -2 2138 87 0 7 chr10 78968805 78969094 -66620194 - AluSc SINE Alu -22 287 1 2168 99 0 19 chr10 78969104 78969416 -66619872 - AluSg SINE Alu -4 306 1 1077 155 0 6 chr10 78969423 78969604 -66619684 - AluSg/x SINE Alu -6 306 127 239 163 20 7 chr10 78969610 78969661 -66619627 - Alu SINE Alu -267 34 1 943 186 28 40 chr10 78969670 78969911 -66619377 - L1MA9 LINE L1 -38 6274 6036 705 149 0 0 chr10 78969911 78970018 -66619270 - U6 snRNA snRNA 0 107 1 1796 121 22 4 chr10 78970031 78970304 -66618984 + L1PA13 LINE L1 5865 6142 -21 1946 122 30 0 chr10 78971876 78972171 -66617117 + AluSx SINE Alu 1 304 -8 1596 37 28 5 chr10 78973038 78973255 -66616033 - AluY SINE Alu -17 294 73 1940 128 30 7 chr10 78973398 78973703 -66615585 + AluSx SINE Alu 1 312 0 1336 158 42 25 chr10 78973728 78974013 -66615275 + AluJb SINE Alu 12 301 -11 315 267 170 91 chr10 78974015 78974080 -66615208 + L1M4 LINE L1 4768 4826 -1320 2020 129 3 3 chr10 78974080 78974390 -66614898 + AluSq SINE Alu 1 310 -3 315 267 170 91 chr10 78974390 78974777 -66614511 + L1M4 LINE L1 4826 5256 -890 1307 123 44 85 chr10 78974815 78974881 -66614407 + L1MA2 LINE L1 6018 6085 -219 1847 132 3 26 chr10 78974881 78975191 -66614097 + AluSx SINE Alu 9 311 -1 1307 123 44 85 chr10 78975191 78975417 -66613871 + L1MA2 LINE L1 6085 6298 -6 24 0 0 0 chr10 78975417 78975441 -66613847 + AT_rich Low_complexity Low_complexity 1 24 0 1447 185 52 0 chr10 78975441 78975727 -66613561 + AluJo SINE Alu 1 301 -11 937 179 7 125 chr10 78975727 78975866 -66613422 + AluYb8 SINE Alu 1 155 -163 2044 104 33 0 chr10 78975866 78976165 -66613123 + AluSx SINE Alu 1 309 -3 937 179 7 125 chr10 78976165 78976181 -66613107 + AluYb8 SINE Alu 155 171 -147 1861 87 62 21 chr10 78976181 78976470 -66612818 + L1PA10 LINE L1 5868 6168 0 937 179 7 125 chr10 78976470 78976593 -66612695 + AluYb8 SINE Alu 171 247 -71 585 127 0 100 chr10 78977018 78977168 -66612120 - AluSq/x SINE Alu -177 136 2 336 275 107 15 chr10 78977244 78977375 -66611913 - L1 LINE L1 -1678 4468 4326 2239 94 0 3 chr10 78977380 78977678 -66611610 + AluSq SINE Alu 2 298 -15 315 254 66 8 chr10 78977757 78977879 -66611409 - L1 LINE L1 -1908 4238 4110 1673 179 7 0 chr10 78977901 78978202 -66611086 - AluJo SINE Alu -9 303 1 1883 79 112 4 chr10 78979490 78979767 -66609521 + AluSq SINE Alu 1 307 -6 522 142 236 19 chr10 78979803 78979931 -66609357 + FLAM_C SINE Alu 5 155 0 943 182 31 0 chr10 78980539 78980698 -66608590 - FRAM SINE Alu 0 166 3 2262 104 0 0 chr10 78980846 78981153 -66608135 + AluSx SINE Alu 1 307 -5 2023 158 6 22 chr10 78982022 78982384 -66606904 + L1MC3 LINE L1 7263 7618 -167 184 57 29 29 chr10 78982751 78982786 -66606502 + (TATATG)n Simple_repeat Simple_repeat 1 35 0 1613 181 0 25 chr10 78982991 78983311 -66605977 + AluJo SINE Alu 1 312 0 2119 106 0 3 chr10 78983471 78983773 -66605515 + AluSx SINE Alu 1 301 -11 281 318 83 45 chr10 78983815 78983947 -66605341 - MIR SINE MIR -56 152 16 1567 127 0 0 chr10 78984502 78984723 -66604565 + AluSx SINE Alu 19 239 -73 863 125 28 0 chr10 78984728 78984872 -66604416 + AluJb SINE Alu 163 310 -2 2215 81 0 0 chr10 78984934 78985217 -66604071 + AluSg SINE Alu 1 283 -27 394 205 0 36 chr10 78985286 78985369 -66603919 - MIR SINE MIR -57 151 78 246 62 0 0 chr10 78986478 78986510 -66602778 + (A)n Simple_repeat Simple_repeat 1 32 0 516 229 89 13 chr10 78987528 78987685 -66601603 - MIR SINE MIR -35 227 59 193 241 12 72 chr10 78987720 78987803 -66601485 + L2 LINE L2 3234 3311 -2 1824 124 37 0 chr10 78988376 78988693 -66600595 - AluSx SINE Alu 0 327 1 1641 210 35 31 chr10 78988694 78988932 -66600356 + L1M4 LINE L1 4847 5089 -1057 1659 101 56 82 chr10 78988932 78989238 -66600050 - AluSx SINE Alu -12 300 3 1641 210 35 31 chr10 78989238 78989451 -66599837 + L1M4 LINE L1 5089 5300 -846 705 221 10 67 chr10 78989467 78989765 -66599523 + AluSx SINE Alu 3 283 -19 303 121 0 0 chr10 78989929 78989987 -66599301 + (C)n Simple_repeat Simple_repeat 1 58 0 261 198 0 0 chr10 78990038 78990119 -66599169 + C-rich Low_complexity Low_complexity 1 81 0 829 124 0 0 chr10 78990474 78990595 -66598693 + AluSg/x SINE Alu 183 303 -9 899 133 54 42 chr10 78990599 78990765 -66598523 - L1MB8 LINE L1 -126 6052 5885 536 135 19 39 chr10 78990952 78991056 -66598232 + AluSq/x SINE Alu 2 103 -210 210 263 0 26 chr10 78991333 78991409 -66597879 + CT-rich Low_complexity Low_complexity 1 74 0 211 149 0 60 chr10 78991631 78991698 -66597590 + (TCCCC)n Simple_repeat Simple_repeat 4 66 0 260 241 36 54 chr10 78991701 78991813 -66597475 + C-rich Low_complexity Low_complexity 4 113 0 24 32 0 0 chr10 78991856 78991887 -66597401 + GC_rich Low_complexity Low_complexity 1 31 0 225 0 0 0 chr10 78992052 78992077 -66597211 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 326 220 132 0 chr10 78992150 78992241 -66597047 + L1M4 LINE L1 5293 5395 -751 2237 78 7 0 chr10 78992242 78992535 -66596753 + AluSp SINE Alu 1 295 -18 977 124 14 0 chr10 78992535 78992680 -66596608 + AluSg/x SINE Alu 132 278 -32 187 54 54 0 chr10 78992680 78992717 -66596571 + (TAA)n Simple_repeat Simple_repeat 1 39 0 832 199 0 0 chr10 78992775 78992911 -66596377 + AluJ SINE Alu 2 137 -175 923 173 43 0 chr10 78992983 78993145 -66596143 + AluJ SINE Alu 130 298 -14 1104 115 0 55 chr10 78993168 78993403 -66595885 + AluSq SINE Alu 12 233 -80 2183 90 3 3 chr10 78994276 78994577 -66594711 - AluY SINE Alu -10 301 1 2074 94 0 7 chr10 78994727 78995015 -66594273 - AluSc SINE Alu -17 292 7 1308 194 79 7 chr10 78995072 78995350 -66593938 - AluJb SINE Alu -14 298 1 325 228 139 13 chr10 78995447 78995605 -66593683 - AluSg/x SINE Alu -4 296 119 1974 163 57 12 chr10 78995922 78995943 -66593345 + L1M3 LINE L1 5262 5281 -890 1768 123 0 97 chr10 78995943 78996283 -66593005 + AluSx SINE Alu 2 308 -4 1974 163 57 12 chr10 78996283 78996478 -66592810 + L1M3 LINE L1 5281 5466 -705 2151 88 3 28 chr10 78996478 78996796 -66592492 + AluSg SINE Alu 1 310 0 1974 163 57 12 chr10 78996796 78996982 -66592306 + L1M3 LINE L1 5466 5683 -488 343 200 43 14 chr10 78996986 78997056 -66592232 + AluJ/FLAM SINE Alu 2 73 -229 217 289 11 11 chr10 78997202 78997292 -66591996 + CT-rich Low_complexity Low_complexity 5 94 0 21 95 0 0 chr10 78998217 78998280 -66591008 + GC_rich Low_complexity Low_complexity 1 63 0 22 0 0 0 chr10 78998334 78998356 -66590932 + GC_rich Low_complexity Low_complexity 1 22 0 1175 140 4 49 chr10 78998759 78999002 -66590286 + AluSg/x SINE Alu 70 301 -9 347 235 235 52 chr10 78999029 78999335 -66589953 - L1ME4a LINE L1 -30 6091 5730 2172 94 7 3 chr10 78999335 78999632 -66589656 - AluSx SINE Alu -14 298 1 1659 162 7 7 chr10 78999739 79000029 -66589259 - AluJb SINE Alu -22 290 1 992 198 0 11 chr10 79000100 79000277 -66589011 - FAM SINE Alu 0 175 1 1796 139 3 23 chr10 79001265 79001568 -66587720 - AluJb SINE Alu -15 297 1 1994 119 3 7 chr10 79001603 79001905 -66587383 - AluSg SINE Alu -9 301 1 355 182 0 102 chr10 79001932 79002020 -66587268 - LTR16C LTR ERVL 0 491 413 396 239 210 40 chr10 79002234 79002410 -66586878 + MIR SINE MIR 57 262 0 1925 135 3 0 chr10 79002434 79002757 -66586531 - AluSx SINE Alu 0 324 1 1567 153 57 7 chr10 79002810 79003091 -66586197 + AluJb SINE Alu 7 301 -11 1510 168 16 42 chr10 79003229 79003538 -66585750 + AluJo SINE Alu 1 301 -11 1381 165 31 8 chr10 79003543 79003804 -66585484 + AluJo SINE Alu 36 302 -10 238 358 81 20 chr10 79003890 79004038 -66585250 + L2 LINE L2 3116 3272 0 243 255 20 0 chr10 79004054 79004105 -66585183 + L2 LINE L2 3209 3260 -12 339 25 0 0 chr10 79004293 79004333 -66584955 + (TA)n Simple_repeat Simple_repeat 2 41 0 2176 74 0 39 chr10 79004333 79004643 -66584645 - AluSx SINE Alu -14 298 1 22 0 0 0 chr10 79006825 79006847 -66582441 + AT_rich Low_complexity Low_complexity 1 22 0 2346 67 3 0 chr10 79007049 79007346 -66581942 + AluSc SINE Alu 1 298 -11 827 181 34 0 chr10 79007348 79007497 -66581791 + AluSc SINE Alu 134 287 -22 844 191 79 0 chr10 79007510 79007688 -66581600 - MER33 DNA MER1_type -132 192 1 317 255 57 28 chr10 79007777 79007883 -66581405 - MER102b DNA MER1_type -6 335 227 722 179 130 6 chr10 79008008 79008170 -66581118 - AluJb SINE Alu -5 307 126 344 250 71 12 chr10 79008503 79008587 -66580701 - L1MC4 LINE L1 -1339 6983 1976 1736 176 6 6 chr10 79008589 79008901 -66580387 - AluSx SINE Alu 0 312 1 192 309 12 36 chr10 79008959 79009043 -66580245 + L2 LINE L2 3228 3309 -4 417 329 27 27 chr10 79009235 79009384 -66579904 + LTR16C LTR ERVL 156 304 -187 1629 179 95 0 chr10 79009425 79009699 -66579589 + AluJb SINE Alu 1 300 -12 370 149 27 54 chr10 79009713 79009787 -66579501 - MER5A DNA MER1_type -107 82 11 756 160 89 19 chr10 79009795 79010008 -66579280 - AluSp SINE Alu -1 312 85 289 349 0 30 chr10 79010253 79010419 -66578869 + G-rich Low_complexity Low_complexity 3 163 0 * 459 267 5 43 chr10 79010350 79010577 -66578711 + GA-rich Low_complexity Low_complexity 1 218 0 392 162 9 48 chr10 79010774 79010879 -66578409 + AluSp/q SINE Alu 203 303 0 255 246 0 0 chr10 79010896 79010953 -66578335 - L2 LINE L2 0 3272 3216 342 0 0 0 chr10 79011080 79011118 -66578170 + (CA)n Simple_repeat Simple_repeat 2 39 0 384 197 68 86 chr10 79011118 79011189 -66578099 - MER5B DNA MER1_type -63 115 45 2187 101 45 0 chr10 79011189 79011476 -66577812 + AluSq SINE Alu 1 300 -13 384 197 68 86 chr10 79011476 79011521 -66577767 - MER5B DNA MER1_type -133 45 1 1964 129 0 0 chr10 79011587 79011851 -66577437 + AluSx SINE Alu 1 264 -48 27 49 0 0 chr10 79012463 79012504 -66576784 + AT_rich Low_complexity Low_complexity 1 41 0 2253 97 31 0 chr10 79012641 79012931 -66576357 + AluY SINE Alu 1 299 -12 2406 83 0 35 chr10 79012931 79013243 -66576045 + AluY SINE Alu 1 301 -10 1080 137 9 50 chr10 79013734 79013786 -66575502 + L1MA4A LINE L1 6090 6143 -160 1918 149 0 58 chr10 79013786 79014114 -66575174 + AluSx SINE Alu 1 309 -3 1080 137 9 50 chr10 79014114 79014280 -66575008 + L1MA4A LINE L1 6143 6299 -4 2483 57 27 0 chr10 79014694 79015029 -66574259 - LTR14A LTR ERVK 0 344 1 2296 126 0 0 chr10 79015242 79015551 -66573737 + AluSx SINE Alu 1 309 -3 263 56 0 0 chr10 79016953 79016989 -66572299 + MIR SINE MIR 113 148 -114 286 143 0 18 chr10 79017511 79017567 -66571721 - MER69 DNA AcHobo -28 2498 2444 1990 110 0 75 chr10 79019291 79019609 -66569679 + AluSx SINE Alu 6 299 -13 2433 99 0 0 chr10 79019823 79020136 -66569152 + AluSq SINE Alu 1 313 0 1269 69 52 0 chr10 79020255 79020429 -66568859 + BC200 scRNA scRNA 1 183 -17 249 321 101 0 chr10 79020431 79020540 -66568748 - MIR3 SINE MIR -87 121 2 25 31 0 0 chr10 79021163 79021195 -66568093 + AT_rich Low_complexity Low_complexity 1 32 0 2193 115 6 10 chr10 79021719 79022033 -66567255 - AluSp SINE Alu 0 313 1 1773 145 24 24 chr10 79022195 79022491 -66566797 - AluJb SINE Alu -16 296 1 903 105 17 39 chr10 79023205 79023272 -66566016 + MER53 DNA DNA 1 68 -121 1793 167 13 17 chr10 79023272 79023572 -66565716 - AluJb SINE Alu -13 299 1 903 105 17 39 chr10 79023572 79023685 -66565603 + MER53 DNA DNA 68 177 -12 397 192 88 0 chr10 79023653 79023778 -66565510 + MER53 DNA DNA 43 178 -11 * 2437 89 3 6 chr10 79023817 79024131 -66565157 - AluSq SINE Alu 0 313 1 462 124 39 124 chr10 79024159 79024288 -66565000 + MER53 DNA DNA 71 188 -1 1902 154 0 3 chr10 79025158 79025444 -66563844 - AluSx SINE Alu -27 285 1 2019 133 4 0 chr10 79025449 79025774 -66563514 - AluSx SINE Alu 0 328 3 824 133 7 22 chr10 79025781 79025916 -66563372 - FLAM_C SINE Alu 0 133 1 1799 154 4 0 chr10 79025965 79026232 -66563056 - AluJb SINE Alu -44 268 1 2079 133 20 3 chr10 79026960 79027254 -66562034 - AluJb SINE Alu -13 299 1 2434 78 0 3 chr10 79028976 79029271 -66560017 - AluSq SINE Alu -11 302 9 2478 58 0 14 chr10 79029428 79029722 -66559566 - AluY SINE Alu -1 310 21 1808 184 0 3 chr10 79029987 79030293 -66558995 - AluJb SINE Alu 0 305 1 823 129 8 8 chr10 79030307 79030431 -66558857 - FLAM_A SINE Alu -7 135 12 1646 93 0 25 chr10 79030899 79031136 -66558152 + AluSq SINE Alu 64 294 -19 2137 124 7 3 chr10 79031142 79031432 -66557856 + AluSg SINE Alu 1 291 -19 1974 149 0 26 chr10 79031521 79031830 -66557458 - AluJb SINE Alu -11 301 1 2453 81 7 0 chr10 79032102 79032409 -66556879 - AluY SINE Alu -2 309 1 863 127 0 89 chr10 79032422 79032579 -66556709 - FLAM_C SINE Alu 0 143 1 201 154 0 0 chr10 79033658 79033697 -66555591 + (CCCTG)n Simple_repeat Simple_repeat 3 41 0 525 227 64 43 chr10 79033829 79033970 -66555318 + MIR SINE MIR 119 262 0 2180 125 13 10 chr10 79034190 79034501 -66554787 - AluSx SINE Alu 0 312 1 200 216 39 0 chr10 79035297 79035348 -66553940 + CT-rich Low_complexity Low_complexity 1 53 0 1664 179 0 40 chr10 79036287 79036363 -66552925 + AluJb SINE Alu 1 79 -245 2434 90 3 3 chr10 79036363 79036675 -66552613 - AluSq SINE Alu 0 313 2 1664 179 0 40 chr10 79036675 79036934 -66552354 + AluJb SINE Alu 79 324 0 2150 74 27 27 chr10 79036962 79037260 -66552028 - AluSg SINE Alu 0 310 13 495 255 153 25 chr10 79038530 79038726 -66550562 - MIR SINE MIR -41 221 1 360 0 0 0 chr10 79042847 79042887 -66546401 + (TG)n Simple_repeat Simple_repeat 1 40 0 2589 60 0 0 chr10 79042942 79043244 -66546044 + AluY SINE Alu 1 302 -9 2240 99 3 20 chr10 79044949 79045251 -66544037 - AluSx SINE Alu -15 297 1 2052 96 0 48 chr10 79045490 79045608 -66543680 + AluY SINE Alu 28 150 -161 2496 62 0 36 chr10 79045608 79045916 -66543372 + AluY SINE Alu 1 297 -14 2052 96 0 48 chr10 79045916 79046088 -66543200 + AluY SINE Alu 150 304 -7 783 279 5 14 chr10 79046618 79046840 -66542448 + AluJo SINE Alu 1 220 -92 471 204 20 0 chr10 79047071 79047169 -66542119 - LTR49-int LTR ERV1 -2884 3447 3348 1008 177 0 28 chr10 79047269 79047450 -66541838 + AluJb SINE Alu 120 295 -17 237 339 218 24 chr10 79047602 79047983 -66541305 - L2 LINE L2 -5 3308 2854 472 183 54 0 chr10 79047991 79048084 -66541204 + LTR47B LTR ERVL 5 102 -341 2327 102 7 0 chr10 79048092 79048395 -66540893 - AluSx SINE Alu -7 305 1 1327 154 28 28 chr10 79048396 79048643 -66540645 + LTR47A LTR ERVL 206 452 0 2947 147 20 56 chr10 79048647 79049253 -66540035 + L1MB2 LINE L1 5586 6169 -2 2154 128 10 3 chr10 79049258 79049564 -66539724 - AluSx SINE Alu -4 308 1 2350 98 3 13 chr10 79049576 79049891 -66539397 - AluSp SINE Alu -1 312 1 2172 125 7 0 chr10 79049891 79050194 -66539094 - AluSp SINE Alu -8 305 1 1623 230 45 30 chr10 79050207 79050698 -66538590 + L1MC4a LINE L1 7160 7657 -151 81 66 0 0 chr10 79050703 79050854 -66538434 + AT_rich Low_complexity Low_complexity 1 151 0 296 305 42 0 chr10 79050857 79050952 -66538336 + L1MD3 LINE L1 7840 7938 -57 240 35 0 0 chr10 79051579 79051608 -66537680 + (TCC)n Simple_repeat Simple_repeat 2 30 0 2184 116 0 0 chr10 79051675 79051999 -66537289 + AluSq SINE Alu 1 324 0 1059 269 196 0 chr10 79052053 79052476 -66536812 + LTR33 LTR ERVL 15 520 -1 313 133 133 67 chr10 79054520 79054640 -66534648 - LTR8 LTR ERV1 -563 128 1 223 186 0 23 chr10 79054861 79054904 -66534384 - MIR SINE MIR 0 262 221 227 213 33 0 chr10 79055054 79055115 -66534173 + AluSp/q SINE Alu 239 301 -2 223 186 0 23 chr10 79056817 79056860 -66532428 + MIR SINE MIR 221 262 0 244 256 35 47 chr10 79057046 79057081 -66532207 - L2 LINE L2 0 3313 3279 3274 158 26 70 chr10 79057081 79057804 -66531484 + LTR8 LTR ERV1 1 691 0 244 256 35 47 chr10 79057804 79057854 -66531434 - L2 LINE L2 -34 3279 3229 2022 136 10 0 chr10 79057992 79058293 -66530995 - AluSc SINE Alu -5 304 1 828 181 121 70 chr10 79058331 79058530 -66530758 - AluJo SINE Alu -103 209 1 728 190 86 6 chr10 79058544 79058718 -66530570 + MER5A DNA MER1_type 1 188 -1 2044 125 36 0 chr10 79058876 79059156 -66530132 + AluSx SINE Alu 1 290 -22 1937 138 17 14 chr10 79059218 79059514 -66529774 - AluJb SINE Alu -13 299 3 2158 119 3 0 chr10 79060194 79060488 -66528800 + AluSp SINE Alu 1 295 -18 1002 235 62 59 chr10 79060500 79060627 -66528661 + AluJo SINE Alu 3 128 -174 2069 156 0 0 chr10 79060627 79060928 -66528360 - AluSx SINE Alu -11 301 1 1002 235 62 59 chr10 79060928 79061083 -66528205 + AluJo SINE Alu 128 292 -10 1613 162 50 23 chr10 79061213 79061516 -66527772 + AluSx SINE Alu 1 311 -1 219 174 333 0 chr10 79061729 79061798 -66527490 + MER5C DNA MER1_type 33 124 -200 1983 156 0 0 chr10 79061928 79062236 -66527052 + AluSx SINE Alu 3 310 -2 1289 140 8 62 chr10 79062236 79062280 -66527008 - PABL_A-int LTR ERV1 -4036 979 934 1896 103 43 27 chr10 79062280 79062580 -66526708 + AluSq SINE Alu 1 305 -8 1289 140 8 62 chr10 79062580 79062778 -66526510 - PABL_A-int LTR ERV1 -4081 934 750 619 144 0 0 chr10 79062772 79062862 -66526426 - pTR5 LTR ERV1 -2046 392 303 * 284 278 11 0 chr10 79062864 79062954 -66526334 - LTR30 LTR ERV1 -79 643 553 256 163 0 0 chr10 79062959 79063002 -66526286 - pTR5 LTR ERV1 -409 2029 1987 1880 130 49 0 chr10 79063022 79063306 -66525982 + AluSx SINE Alu 1 298 -14 246 291 236 8 chr10 79063503 79063630 -66525658 - MIR SINE MIR -57 205 50 2329 55 0 23 chr10 79063668 79063976 -66525312 - AluY SINE Alu -9 302 2 643 240 46 29 chr10 79065800 79065975 -66523313 + MER5B DNA MER1_type 1 178 0 324 195 78 109 chr10 79066013 79066141 -66523147 + MIR3 SINE MIR 84 207 -1 1177 81 0 0 chr10 79066290 79066439 -66522849 + AluSp SINE Alu 130 278 -35 683 258 0 0 chr10 79066468 79066627 -66522661 + FRAM SINE Alu 2 160 -6 725 250 6 0 chr10 79067249 79067405 -66521883 - MER20 DNA MER1_type -3 216 60 2230 230 180 21 chr10 79067421 79067587 -66521701 - Charlie1 DNA MER1_type -181 2580 2442 2069 117 0 0 chr10 79067587 79067886 -66521402 + AluY SINE Alu 1 299 -12 2230 230 180 21 chr10 79067886 79067900 -66521388 - Charlie1 DNA MER1_type -319 2442 2432 2025 129 3 0 chr10 79067900 79068195 -66521093 + AluSx SINE Alu 5 300 -12 2230 230 180 21 chr10 79068195 79068674 -66520614 - Charlie1 DNA MER1_type -329 2432 2031 1248 179 101 30 chr10 79068674 79068942 -66520346 - AluJo SINE Alu -15 287 1 2230 230 180 21 chr10 79068942 79069298 -66519990 - Charlie1 DNA MER1_type -730 2031 86 377 233 0 68 chr10 79069341 79069364 -66519924 - Charlie1 DNA MER1_type -2665 96 73 2191 113 3 0 chr10 79069364 79069675 -66519613 + AluSq SINE Alu 1 312 -1 377 233 0 68 chr10 79069675 79069754 -66519534 - Charlie1 DNA MER1_type -2688 73 1 1719 112 6 96 chr10 79070552 79070874 -66518414 - AluSg SINE Alu -17 293 1 1301 156 20 16 chr10 79072785 79073029 -66516259 - AluY SINE Alu -1 310 66 3138 138 26 25 chr10 79075110 79075650 -66513638 + L1MA8 LINE L1 5644 6187 -104 931 214 17 25 chr10 79075650 79075888 -66513400 + MER46A DNA MER2_type 1 236 0 3138 138 26 25 chr10 79075888 79075919 -66513369 + L1MA8 LINE L1 6187 6216 -75 22 0 0 0 chr10 79075989 79076011 -66513277 + AT_rich Low_complexity Low_complexity 1 22 0 218 283 19 0 chr10 79076227 79076280 -66513008 + L2 LINE L2 3237 3290 -23 333 118 0 0 chr10 79076289 79076340 -66512948 + (TGGA)n Simple_repeat Simple_repeat 1 51 0 210 286 0 0 chr10 79076353 79076402 -66512886 + (TGGG)n Simple_repeat Simple_repeat 4 52 0 192 242 0 30 chr10 79076536 79076635 -66512653 + GA-rich Low_complexity Low_complexity 1 96 0 27 49 0 0 chr10 79076927 79076968 -66512320 + AT_rich Low_complexity Low_complexity 1 41 0 320 264 146 34 chr10 79077483 79077661 -66511627 - MIR SINE MIR -30 232 35 2096 170 13 16 chr10 79077692 79078068 -66511220 - THE1C LTR MaLR 0 375 1 1005 78 99 0 chr10 79078362 79078504 -66510784 + MSTA LTR MaLR 1 156 -272 21 36 0 0 chr10 79079633 79079661 -66509627 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr10 79079704 79079728 -66509560 + AT_rich Low_complexity Low_complexity 1 24 0 2126 107 0 16 chr10 79080401 79080711 -66508577 + AluSx SINE Alu 1 305 -7 703 157 16 70 chr10 79081669 79081854 -66507434 - AluY SINE Alu -135 176 2 1047 158 0 0 chr10 79082102 79082266 -66507022 - AluSg/x SINE Alu -17 293 130 209 225 0 28 chr10 79082340 79082411 -66506877 + A-rich Low_complexity Low_complexity 2 70 0 2019 112 30 7 chr10 79082600 79082904 -66506384 + AluSx SINE Alu 1 311 -1 37 39 0 0 chr10 79083192 79083243 -66506045 + AT_rich Low_complexity Low_complexity 1 51 0 225 210 12 37 chr10 79086315 79086396 -66502892 + G-rich Low_complexity Low_complexity 2 80 0 240 348 33 0 chr10 79087313 79087405 -66501883 - MIR SINE MIR -93 115 21 213 299 39 13 chr10 79087569 79087646 -66501642 + L2 LINE L2 3235 3313 0 2598 35 0 13 chr10 79087896 79088211 -66501077 - AluY SINE Alu 0 311 1 26 0 0 0 chr10 79088323 79088349 -66500939 + AT_rich Low_complexity Low_complexity 1 26 0 646 214 174 0 chr10 79088400 79088578 -66500710 - MER3 DNA MER1_type 0 209 1 558 298 147 9 chr10 79089393 79089611 -66499677 - MIR SINE MIR -13 249 2 198 176 29 0 chr10 79090438 79090472 -66498816 - L2 LINE L2 -94 3219 3185 1438 128 54 70 chr10 79090650 79090948 -66498340 - AluJb SINE Alu -19 293 1 31 76 0 0 chr10 79091954 79092020 -66497268 + GC_rich Low_complexity Low_complexity 1 66 0 1671 191 118 9 chr10 79092722 79093172 -66496116 - Charlie4a DNA MER1_type -8 500 2 2348 61 7 0 chr10 79093174 79093468 -66495820 + AluY SINE Alu 1 296 -15 443 266 40 111 chr10 79093673 79093769 -66495519 - Charlie8 DNA MER1_type -2198 219 118 2099 114 0 0 chr10 79093769 79094066 -66495222 + AluSx SINE Alu 1 297 -15 443 266 40 111 chr10 79094066 79094195 -66495093 - Charlie8 DNA MER1_type -2299 118 10 275 309 50 29 chr10 79095103 79095242 -66494046 - MIR SINE MIR -41 221 80 1706 138 32 3 chr10 79096439 79096721 -66492567 - AluJo SINE Alu -22 290 1 364 225 146 7 chr10 79096765 79096916 -66492372 + MARNA DNA Mariner 376 547 -39 691 247 272 7 chr10 79096927 79097210 -66492078 + L2 LINE L2 2956 3313 0 1431 190 23 7 chr10 79097211 79097511 -66491777 - AluJo SINE Alu -7 305 1 2185 101 3 0 chr10 79098253 79098551 -66490737 - AluSp SINE Alu -14 299 1 831 186 93 6 chr10 79098558 79098719 -66490569 - FAM SINE Alu 0 175 1 180 0 0 0 chr10 79098738 79098758 -66490530 + (T)n Simple_repeat Simple_repeat 1 20 0 1232 145 5 10 chr10 79098776 79098976 -66490312 - AluJb SINE Alu -113 199 1 201 196 20 0 chr10 79099185 79099236 -66490052 + (TA)n Simple_repeat Simple_repeat 2 53 0 1215 102 6 0 chr10 79099420 79099587 -66489701 - AluSg/x SINE Alu -9 301 134 21 0 0 0 chr10 79100470 79100491 -66488797 + GC_rich Low_complexity Low_complexity 1 21 0 1884 202 50 22 chr10 79102107 79102328 -66486960 - MSTB LTR MaLR -12 414 176 1980 129 0 10 chr10 79102328 79102630 -66486658 - AluSx SINE Alu -13 299 1 1884 202 50 22 chr10 79102630 79102809 -66486479 - MSTB LTR MaLR -250 176 3 2064 125 0 10 chr10 79103101 79103412 -66485876 + AluY SINE Alu 1 308 -3 34 24 0 0 chr10 79103821 79103862 -66485426 + AT_rich Low_complexity Low_complexity 1 41 0 2151 110 3 0 chr10 79104254 79104553 -66484735 + AluSx SINE Alu 1 300 -12 376 252 108 81 chr10 79104609 79104831 -66484457 - HAL1 LINE L1 -208 2299 2072 1133 282 162 64 chr10 79104895 79105420 -66483868 - HAL1 LINE L1 -361 2146 1674 6879 65 12 20 chr10 79105420 79107087 -66482201 - SVA Other Other -683 1386 6 1133 282 162 64 chr10 79107087 79107649 -66481639 - HAL1 LINE L1 -833 1674 821 250 264 58 50 chr10 79107695 79107816 -66481472 - HAL1 LINE L1 -1765 742 621 401 310 135 49 chr10 79107999 79108325 -66480963 - HAL1 LINE L1 -2150 357 4 1167 158 5 23 chr10 79108573 79108788 -66480500 + AluJo SINE Alu 87 297 -15 3510 212 23 4 chr10 79108900 79108911 -66480377 - L1 LINE L1 -852 5294 5285 2822 102 9 25 chr10 79108911 79109360 -66479928 - L1PB1 LINE L1 -1 6150 5709 3510 212 23 4 chr10 79109360 79110168 -66479120 - L1 LINE L1 -861 5285 4459 3298 195 19 16 chr10 79110169 79110195 -66479093 + L1 LINE L1 3762 3786 -2360 2203 84 0 7 chr10 79110195 79110492 -66478796 + AluSg SINE Alu 1 295 -15 3298 195 19 16 chr10 79110492 79111113 -66478175 + L1 LINE L1 3786 4414 -1732 201 39 0 0 chr10 79111113 79111139 -66478149 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 3298 195 19 16 chr10 79111139 79111188 -66478100 + L1 LINE L1 4414 4461 -1685 2476 49 3 0 chr10 79112285 79112589 -66476699 + AluY SINE Alu 1 305 -6 1727 145 13 35 chr10 79113580 79113756 -66475532 - AluSx SINE Alu -1 311 133 1926 116 17 10 chr10 79113756 79114058 -66475230 - AluSg1 SINE Alu -5 304 1 2242 106 3 0 chr10 79114062 79114365 -66474923 - AluSp SINE Alu -9 304 1 1727 145 13 35 chr10 79114365 79114501 -66474787 - AluSx SINE Alu -182 130 1 2028 108 10 0 chr10 79114510 79114841 -66474447 - AluSx SINE Alu 0 312 1 2153 97 3 3 chr10 79114853 79115142 -66474146 - AluSq SINE Alu -24 289 1 2175 109 3 3 chr10 79115145 79115449 -66473839 - AluSq SINE Alu -9 304 1 2376 94 0 0 chr10 79115940 79116248 -66473040 - AluSg SINE Alu -2 308 1 1738 122 48 4 chr10 79117685 79117984 -66471304 + AluSx SINE Alu 1 311 0 203 236 11 56 chr10 79118031 79118120 -66471168 + T-rich Low_complexity Low_complexity 1 85 0 1782 165 0 7 chr10 79118527 79118830 -66470458 - AluJo SINE Alu -11 301 1 876 205 6 6 chr10 79119084 79119250 -66470038 + FRAM SINE Alu 1 166 0 250 256 18 98 chr10 79119264 79119428 -66469860 - L1ME3A LINE L1 -51 6119 5969 2017 129 0 7 chr10 79119455 79119758 -66469530 - AluSx SINE Alu -11 301 1 1402 165 24 17 chr10 79119794 79120085 -66469203 + AluJo SINE Alu 1 293 -19 351 206 72 31 chr10 79120154 79120251 -66469037 - L1MC5 LINE L1 -451 7510 7410 594 116 9 45 chr10 79120255 79120272 -66469016 - MER2 DNA MER2_type -150 195 179 1310 106 111 24 chr10 79120272 79120480 -66468808 - MER30 DNA MER1_type -4 226 1 594 116 9 45 chr10 79120480 79120539 -66468749 - MER2 DNA MER2_type -166 179 122 2214 105 0 0 chr10 79120539 79120833 -66468455 + AluSx SINE Alu 1 294 -18 594 116 9 45 chr10 79120833 79120867 -66468421 - MER2 DNA MER2_type -223 122 88 191 273 18 0 chr10 79120869 79120924 -66468364 + L2 LINE L2 2497 2552 -762 549 128 0 75 chr10 79120924 79121018 -66468270 + MER2 DNA MER2_type 1 87 -258 1684 233 64 34 chr10 79121022 79121258 -66468030 - L2 LINE L2 -997 2317 2090 1896 151 3 0 chr10 79121258 79121562 -66467726 + AluSx SINE Alu 1 305 -7 1684 233 64 34 chr10 79121562 79121792 -66467496 - L2 LINE L2 -1224 2090 1837 2320 67 0 7 chr10 79121802 79122099 -66467189 + AluY SINE Alu 1 295 -16 253 191 22 45 chr10 79122646 79122735 -66466553 + GA-rich Low_complexity Low_complexity 1 87 0 427 178 40 40 chr10 79122802 79122903 -66466385 - AluJ/FLAM SINE Alu -210 102 2 758 176 8 0 chr10 79122937 79123062 -66466226 + FLAM_C SINE Alu 2 127 -16 23 33 0 0 chr10 79123062 79123092 -66466196 + AT_rich Low_complexity Low_complexity 1 30 0 180 0 0 0 chr10 79124601 79124621 -66464667 + (TG)n Simple_repeat Simple_repeat 1 20 0 1261 162 20 81 chr10 79124621 79124918 -66464370 - AluJo SINE Alu -33 279 1 631 317 62 21 chr10 79130636 79130876 -66458412 - MIR SINE MIR -1 261 12 2038 107 24 0 chr10 79130926 79131215 -66458073 - AluSx SINE Alu -16 296 1 2052 139 3 0 chr10 79131621 79131930 -66457358 - AluSx SINE Alu -2 310 1 2448 57 0 0 chr10 79134774 79135075 -66454213 - AluY SINE Alu -10 301 1 288 0 0 0 chr10 79135618 79135650 -66453638 + (A)n Simple_repeat Simple_repeat 1 32 0 1497 191 0 0 chr10 79140108 79140370 -66448918 - AluJb SINE Alu -16 296 35 225 156 89 0 chr10 79140391 79140436 -66448852 + L2 LINE L2 1630 1678 -1636 198 0 0 0 chr10 79140444 79140466 -66448822 + (CA)n Simple_repeat Simple_repeat 1 22 0 1808 191 2 88 chr10 79140478 79140969 -66448319 + L1MB8 LINE L1 5729 6177 -1 211 197 211 13 chr10 79140981 79141057 -66448231 + L2 LINE L2 1720 1810 -1504 2122 92 0 4 chr10 79141059 79141364 -66447924 - AluSg SINE Alu 0 304 1 1574 120 76 47 chr10 79141369 79141670 -66447618 - AluJo SINE Alu -2 310 1 1378 184 44 10 chr10 79141786 79142080 -66447208 - AluJb SINE Alu -8 304 1 212 206 15 44 chr10 79142253 79142321 -66446967 + CT-rich Low_complexity Low_complexity 2 67 0 621 206 0 0 chr10 79142948 79143055 -66446233 - THE1C LTR MaLR -268 107 1 229 100 0 0 chr10 79143101 79143155 -66446133 - AluSp/q SINE Alu 0 309 256 363 204 9 65 chr10 79143155 79143263 -66446025 - L1M4 LINE L1 -1763 4383 4282 1828 88 110 4 chr10 79143268 79143540 -66445748 - AluSg SINE Alu -9 301 1 1871 128 26 20 chr10 79143563 79143868 -66445420 - AluSx SINE Alu -2 310 4 206 211 0 0 chr10 79143918 79143956 -66445332 - MIR SINE MIR -9 253 216 180 360 37 59 chr10 79143966 79144102 -66445186 - MIR3 SINE MIR -51 157 25 222 296 56 0 chr10 79144950 79145021 -66444267 + L2 LINE L2 3155 3229 -43 260 346 79 14 chr10 79145092 79145306 -66443982 - L2 LINE L2 -1554 1760 1533 2272 86 3 0 chr10 79145412 79145713 -66443575 - AluY SINE Alu -9 302 1 207 343 28 19 chr10 79147706 79147814 -66441474 + L2 LINE L2 868 976 -2338 2178 91 0 19 chr10 79147828 79148136 -66441152 + AluSx SINE Alu 1 302 -10 196 360 99 29 chr10 79148242 79148625 -66440663 + L2 LINE L2 1042 1451 -1863 1142 179 4 61 chr10 79148738 79149000 -66440288 + AluJb SINE Alu 21 267 -45 1626 203 25 34 chr10 79149026 79149381 -66439907 + MER93b LTR ERV1 5 356 -17 446 288 15 8 chr10 79149381 79149513 -66439775 + L1MC1 LINE L1 6201 6333 0 262 328 17 8 chr10 79149775 79149894 -66439394 + 5S rRNA rRNA 2 121 0 381 22 0 0 chr10 79149930 79149976 -66439312 + (CA)n Simple_repeat Simple_repeat 2 47 0 341 21 0 21 chr10 79150603 79150650 -66438638 + (CA)n Simple_repeat Simple_repeat 2 47 0 682 175 0 118 chr10 79151817 79152028 -66437260 - L1M3 LINE L1 -727 5441 5256 2247 108 0 0 chr10 79152068 79152374 -66436914 - AluSp SINE Alu -7 306 1 2031 110 3 41 chr10 79152383 79152701 -66436587 - AluSx SINE Alu -6 306 1 180 111 0 0 chr10 79153062 79153089 -66436199 + (TA)n Simple_repeat Simple_repeat 2 28 0 1218 225 96 61 chr10 79153147 79153268 -66436020 + MLT1D LTR MaLR 1 116 -477 1449 214 73 3 chr10 79153268 79153609 -66435679 + MLT1A1 LTR MaLR 1 365 0 1218 225 96 61 chr10 79153609 79153984 -66435304 + MLT1D LTR MaLR 116 593 0 310 68 17 17 chr10 79153995 79154054 -66435234 + (CA)n Simple_repeat Simple_repeat 2 60 0 713 196 8 8 chr10 79154116 79154249 -66435039 + FLAM_A SINE Alu 1 133 0 2169 94 10 3 chr10 79155525 79155824 -66433464 + AluSc SINE Alu 1 301 -8 1388 210 0 10 chr10 79155939 79156230 -66433058 - AluJo SINE Alu -23 289 2 624 176 9 0 chr10 79158182 79158290 -66430998 - MER65A LTR ERV1 -165 280 172 4835 68 11 17 chr10 79158291 79158955 -66430333 - SVA Other Other 0 1386 727 1156 244 79 5 chr10 79160820 79161214 -66428074 + L1MC4 LINE L1 6821 7243 -799 1730 149 0 37 chr10 79161329 79161652 -66427636 + AluJo SINE Alu 1 311 -1 25 31 0 0 chr10 79162396 79162428 -66426860 + AT_rich Low_complexity Low_complexity 1 32 0 191 317 87 19 chr10 79164208 79164312 -66424976 - L2 LINE L2 -229 3043 2933 1827 150 14 3 chr10 79165313 79165607 -66423681 - AluSx SINE Alu -15 297 1 1053 196 40 0 chr10 79165912 79166111 -66423177 + MER58A DNA MER1_type 2 208 -16 459 259 73 21 chr10 79167129 79167330 -66421958 + L1MC4a LINE L1 5749 5959 -162 1643 142 77 10 chr10 79167487 79167798 -66421490 + L1MA4 LINE L1 5968 6299 -1 2251 110 3 0 chr10 79168179 79168489 -66420799 - AluSp SINE Alu -2 311 1 321 264 82 38 chr10 79168764 79168923 -66420365 + MIR SINE MIR 96 261 -1 1146 86 0 7 chr10 79169743 79169895 -66419393 - AluSc SINE Alu -158 151 1 2157 108 0 0 chr10 79170473 79170769 -66418519 - AluSq SINE Alu -15 298 3 2043 113 3 17 chr10 79170780 79171080 -66418208 - AluSx SINE Alu -16 296 1 2150 93 0 3 chr10 79171110 79171419 -66417869 + AluSx SINE Alu 1 312 0 1332 180 4 19 chr10 79175614 79175875 -66413413 - AluJo SINE Alu -14 298 42 2165 116 3 0 chr10 79176056 79176367 -66412921 + AluSx SINE Alu 1 312 0 802 208 68 51 chr10 79176538 79176774 -66412514 - MIR SINE MIR -18 244 5 27 108 0 0 chr10 79176913 79177024 -66412264 + GC_rich Low_complexity Low_complexity 1 111 0 255 31 0 0 chr10 79178386 79178418 -66410870 + (TG)n Simple_repeat Simple_repeat 1 32 0 2344 67 0 3 chr10 79179015 79179315 -66409973 - AluSp SINE Alu -13 300 2 1976 130 6 16 chr10 79179642 79179957 -66409331 + AluSx SINE Alu 1 312 0 182 245 41 0 chr10 79182467 79182516 -66406772 + L2 LINE L2 3244 3294 -19 2185 99 0 0 chr10 79182639 79182932 -66406356 + AluSx SINE Alu 1 293 -19 519 330 178 21 chr10 79185032 79185597 -66403691 + L2 LINE L2 2615 3270 -2 1653 165 3 54 chr10 79186878 79187194 -66402094 + AluJo SINE Alu 1 300 -12 2069 113 0 16 chr10 79187748 79188057 -66401231 + AluJb SINE Alu 1 304 -8 2072 107 47 7 chr10 79188153 79188453 -66400835 + AluJo SINE Alu 1 312 0 183 182 0 0 chr10 79190724 79190757 -66398531 - MIR SINE MIR -113 149 117 1893 96 66 0 chr10 79191721 79191993 -66397295 + AluSx SINE Alu 1 290 -22 267 248 9 16 chr10 79196260 79196357 -66392931 - MER5B DNA MER1_type 0 189 1 2133 99 14 3 chr10 79196431 79196723 -66392565 + AluSx SINE Alu 1 295 -17 1089 77 7 0 chr10 79196975 79197118 -66392170 - AluSp/q SINE Alu -14 299 156 1574 141 0 4 chr10 79197154 79197396 -66391892 + AluSg/x SINE Alu 70 310 0 802 208 68 51 chr10 79197567 79197803 -66391485 - MIR SINE MIR -18 244 5 450 201 149 22 chr10 79198456 79198590 -66390698 + MIR SINE MIR 112 262 0 208 217 0 0 chr10 79198598 79198644 -66390644 + (CAT)n Simple_repeat Simple_repeat 3 48 0 280 312 21 0 chr10 79198649 79198742 -66390546 + MIR SINE MIR 168 262 0 2397 77 0 0 chr10 79198769 79199068 -66390220 + AluSx SINE Alu 1 299 -13 271 193 92 82 chr10 79199103 79199232 -66390056 + MIR SINE MIR 17 164 -91 829 169 101 0 chr10 79199235 79199383 -66389905 + FRAM SINE Alu 2 164 -12 571 243 123 78 chr10 79200958 79201242 -66388046 + MER102b DNA MER1_type 44 340 -1 1266 109 8 96 chr10 79202316 79202555 -66386733 + L1MC1 LINE L1 6116 6333 0 359 226 288 34 chr10 79202810 79202956 -66386332 - MER5A DNA MER1_type 0 189 7 333 231 46 37 chr10 79202973 79203081 -66386207 + MIR SINE MIR 27 135 -127 673 248 66 35 chr10 79204100 79204326 -66384962 + MIR SINE MIR 28 260 -2 732 180 8 0 chr10 79204356 79204484 -66384804 + FLAM_A SINE Alu 4 132 -1 214 127 0 73 chr10 79204859 79204914 -66384374 + (GGGTG)n Simple_repeat Simple_repeat 2 52 0 475 287 60 12 chr10 79206309 79206476 -66382812 + MIR SINE MIR 13 187 -75 393 259 71 18 chr10 79206470 79206582 -66382706 + L2 LINE L2 3194 3311 -2 * 242 200 53 40 chr10 79206573 79206648 -66382640 + MIR SINE MIR 187 262 0 * 1939 118 4 7 chr10 79208380 79208659 -66380629 + AluSx SINE Alu 3 280 -32 1111 175 13 74 chr10 79209808 79210037 -66379251 - MER20 DNA MER1_type -4 215 1 1931 146 7 3 chr10 79210130 79210432 -66378856 + AluJb SINE Alu 1 303 -9 285 310 52 26 chr10 79210867 79210983 -66378305 + MIR3 SINE MIR 86 204 -4 225 317 0 50 chr10 79212773 79212874 -66376414 + MIR3 SINE MIR 107 202 -6 385 311 76 62 chr10 79213818 79214043 -66375245 - L2 LINE L2 -20 3252 3025 418 308 116 92 chr10 79214238 79214343 -66374945 - L2 LINE L2 -529 2785 2684 1066 179 12 0 chr10 79214343 79214516 -66374772 + FAM SINE Alu 1 175 0 418 308 116 92 chr10 79214516 79214824 -66374464 - L2 LINE L2 -630 2684 2353 2563 57 17 0 chr10 79214824 79215124 -66374164 - AluY SINE Alu -6 305 1 418 308 116 92 chr10 79215124 79215271 -66374017 - L2 LINE L2 -961 2353 2211 1973 138 3 3 chr10 79215730 79216013 -66373275 + AluSx SINE Alu 14 296 -16 1766 169 30 24 chr10 79216034 79216329 -66372959 + AluJb SINE Alu 1 297 -15 1915 134 35 10 chr10 79217059 79217349 -66371939 + AluSx SINE Alu 1 297 -15 202 281 240 10 chr10 79217467 79217563 -66371725 + L2 LINE L2 3194 3311 -2 315 258 133 33 chr10 79221336 79221456 -66367832 + MIR SINE MIR 21 152 -110 590 251 36 24 chr10 79221490 79221657 -66367631 + MER5B DNA MER1_type 5 173 -5 955 239 33 5 chr10 79221892 79222105 -66367183 - MIR SINE MIR -11 251 33 2254 120 3 0 chr10 79224292 79224601 -66364687 + AluSx SINE Alu 1 310 -2 1659 160 31 20 chr10 79224834 79225127 -66364161 + AluJo SINE Alu 1 296 -16 286 292 24 65 chr10 79225292 79225460 -66363828 - L2 LINE L2 -216 3056 2896 2754 45 0 0 chr10 79226209 79226517 -66362771 + AluY SINE Alu 1 308 -3 2206 114 0 10 chr10 79226528 79226826 -66362462 + AluSx SINE Alu 1 295 -17 264 242 101 31 chr10 79226840 79226976 -66362312 + L1M2 LINE L1 5327 5467 -672 315 265 11 81 chr10 79227011 79227164 -66362124 + L1ME4a LINE L1 5584 5723 -398 1894 174 13 7 chr10 79227164 79227474 -66361814 + AluJo SINE Alu 1 312 0 315 265 11 81 chr10 79227474 79227505 -66361783 + L1ME4a LINE L1 5723 5755 -366 722 161 8 24 chr10 79227508 79227632 -66361656 + FLAM_A SINE Alu 1 122 -11 645 271 75 104 chr10 79227639 79227822 -66361466 + L1ME4a LINE L1 5726 5913 -208 2329 95 7 0 chr10 79227822 79228117 -66361171 + AluSc SINE Alu 1 297 -12 645 271 75 104 chr10 79228117 79228335 -66360953 + L1ME4a LINE L1 5913 6115 -6 22 35 0 0 chr10 79228335 79228364 -66360924 + AT_rich Low_complexity Low_complexity 1 29 0 736 152 38 38 chr10 79228377 79228509 -66360779 + FLAM_A SINE Alu 2 133 0 2035 125 35 0 chr10 79228551 79228839 -66360449 - AluSx SINE Alu -14 298 1 2439 95 7 0 chr10 79228863 79229169 -66360119 - AluSg SINE Alu -2 308 1 21 0 0 0 chr10 79229918 79229939 -66359349 + AT_rich Low_complexity Low_complexity 1 21 0 1104 158 12 0 chr10 79229988 79230152 -66359136 + AluJb SINE Alu 134 299 -13 306 0 0 0 chr10 79230692 79230726 -66358562 + (CA)n Simple_repeat Simple_repeat 2 35 0 2115 82 3 21 chr10 79230827 79231109 -66358179 + AluSx SINE Alu 1 277 -35 423 0 0 0 chr10 79231113 79231160 -66358128 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 830 267 172 8 chr10 79231381 79231741 -66357547 - Tigger8 DNA MER2_type -53 613 195 205 271 0 0 chr10 79232240 79232288 -66357000 + CT-rich Low_complexity Low_complexity 2 49 0 2433 56 24 0 chr10 79232948 79233236 -66356052 + AluY SINE Alu 1 295 -16 2452 91 0 7 chr10 79233963 79234272 -66355016 - AluSx SINE Alu -1 311 5 290 214 40 43 chr10 79236557 79236683 -66352605 + MIR SINE MIR 21 192 -70 1008 270 113 60 chr10 79236784 79236911 -66352377 - L2 LINE L2 -25 3288 3169 1944 154 3 3 chr10 79236911 79237217 -66352071 + AluSx SINE Alu 1 306 -6 1008 270 113 60 chr10 79237217 79237265 -66352023 - L2 LINE L2 -144 3169 3125 2335 113 0 0 chr10 79237265 79237567 -66351721 + AluSx SINE Alu 1 302 -10 1008 270 113 60 chr10 79237567 79237961 -66351327 - L2 LINE L2 -188 3125 2753 2327 99 0 0 chr10 79237961 79238254 -66351034 + AluSq SINE Alu 3 295 -18 1008 270 113 60 chr10 79238254 79238557 -66350731 - L2 LINE L2 -560 2753 2361 818 149 0 15 chr10 79239166 79239300 -66349988 + FLAM_C SINE Alu 1 132 -11 2406 92 0 10 chr10 79239317 79239452 -66349836 + AluSx SINE Alu 1 136 -176 2480 87 0 6 chr10 79239452 79239763 -66349525 + AluSq SINE Alu 1 309 -4 2406 92 0 10 chr10 79239763 79239933 -66349355 + AluSx SINE Alu 136 303 -9 282 29 0 0 chr10 79239933 79239968 -66349320 + (TA)n Simple_repeat Simple_repeat 2 36 0 226 222 0 0 chr10 79239968 79240013 -66349275 + MER81 DNA DNA 70 114 0 255 61 0 0 chr10 79240739 79240772 -66348516 + (CCCTG)n Simple_repeat Simple_repeat 1 33 0 450 270 130 15 chr10 79241295 79241495 -66347793 + MIR SINE MIR 2 224 -38 2491 64 3 0 chr10 79243669 79243964 -66345324 + AluY SINE Alu 2 297 -14 209 182 152 0 chr10 79244818 79244884 -66344404 + MIR SINE MIR 79 154 -108 600 324 62 5 chr10 79245550 79245775 -66343513 + MIR SINE MIR 1 238 -24 2460 60 0 10 chr10 79248046 79248344 -66340944 + AluSg SINE Alu 16 310 0 1783 178 16 10 chr10 79248747 79249056 -66340232 + AluJb SINE Alu 1 311 -1 248 285 220 0 chr10 79249070 79249256 -66340032 + L1MC/D LINE L1 5569 5795 -2013 378 0 0 0 chr10 79251677 79251719 -66337569 + (TG)n Simple_repeat Simple_repeat 1 42 0 7803 62 23 4 chr10 79252410 79253536 -66335752 - L1P LINE L1 -3640 2506 1359 1960 201 88 2 chr10 79253885 79254363 -66334925 + Charlie1b DNA MER1_type 1 519 -4 1675 144 26 47 chr10 79256307 79256647 -66332641 + THE1B LTR MaLR 32 364 0 6079 30 8 0 chr10 79257372 79258368 -66330920 - L1P2 LINE L1 -515 5639 4639 571 283 86 5 chr10 79258540 79258738 -66330550 - Charlie8 DNA MER1_type -2203 214 1 1684 188 0 41 chr10 79258739 79259059 -66330229 - AluJb SINE Alu -5 307 1 584 325 67 12 chr10 79260563 79260803 -66328485 + MIR SINE MIR 8 260 -2 349 274 34 51 chr10 79261257 79261374 -66327914 - L1MC4 LINE L1 -1337 6705 6591 183 276 86 0 chr10 79263357 79263415 -66325873 - L2 LINE L2 0 3272 3210 246 132 29 15 chr10 79263467 79263535 -66325753 + (TA)n Simple_repeat Simple_repeat 1 69 0 330 350 55 31 chr10 79263710 79263964 -66325324 - L3 LINE CR1 -99 1478 1219 4104 168 17 9 chr10 79264318 79265357 -66323931 + L1MA6 LINE L1 4961 6010 -290 297 0 0 0 chr10 79266240 79266273 -66323015 + (CA)n Simple_repeat Simple_repeat 2 34 0 1214 268 50 44 chr10 79266273 79266928 -66322360 - L2 LINE L2 -167 3146 2495 1704 134 10 26 chr10 79267063 79267376 -66321912 + AluSx SINE Alu 1 308 -4 567 227 23 15 chr10 79267831 79267963 -66321325 + AluJo/FLAM SINE Alu 1 133 -169 1319 76 6 0 chr10 79267965 79268136 -66321152 + AluSp SINE Alu 1 172 -141 381 354 79 0 chr10 79268557 79268721 -66320567 - MIR SINE MIR -57 205 29 186 43 0 0 chr10 79269215 79269238 -66320050 + (TC)n Simple_repeat Simple_repeat 2 24 0 1121 274 29 81 chr10 79269819 79270301 -66318987 - LTR16A1 LTR ERVL 0 457 1 535 164 35 26 chr10 79270444 79270560 -66318728 - MLT1A1 LTR MaLR 0 365 249 1228 194 29 4 chr10 79271031 79271309 -66317979 - AluJo SINE Alu -19 293 9 401 262 43 28 chr10 79271497 79271638 -66317650 - MLT1I LTR MaLR -229 180 38 438 60 0 72 chr10 79273678 79273761 -66315527 - L1PA16 LINE L1 -11 6155 6079 486 297 7 0 chr10 79275121 79275259 -66314029 - MIR SINE MIR -77 185 47 244 333 17 17 chr10 79275659 79275776 -66313512 - L2 LINE L2 -36 3277 3161 275 49 24 0 chr10 79277323 79277364 -66311924 + (TG)n Simple_repeat Simple_repeat 2 43 0 30 27 0 0 chr10 79277829 79277866 -66311422 + AT_rich Low_complexity Low_complexity 1 37 0 672 174 58 0 chr10 79277977 79278132 -66311156 + L1MA8 LINE L1 6128 6291 0 180 284 142 15 chr10 79278141 79278275 -66311013 + MIR SINE MIR 99 249 -13 2753 132 19 56 chr10 79278518 79278685 -66310603 - L1MB4 LINE L1 -188 5992 5820 2236 114 0 0 chr10 79278685 79278992 -66310296 - AluSx SINE Alu -5 307 1 2753 132 19 56 chr10 79278992 79279361 -66309927 - L1MB4 LINE L1 -360 5820 5476 4163 50 4 0 chr10 79280346 79280851 -66308437 + L1PA5 LINE L1 5648 6154 0 370 253 22 56 chr10 79282139 79282317 -66306971 + GA-rich Low_complexity Low_complexity 5 176 0 1537 161 37 4 chr10 79282344 79282617 -66306671 + AluJb SINE Alu 9 290 -22 257 27 0 0 chr10 79282617 79282654 -66306634 + L1MB4 LINE L1 6142 6178 -2 1942 125 0 11 chr10 79282684 79283002 -66306286 + AluSx SINE Alu 1 315 0 538 121 0 121 chr10 79283374 79283425 -66305863 - L1M3 LINE L1 -627 5544 5513 981 149 0 83 chr10 79283425 79283568 -66305720 - AluJo/FRAM SINE Alu 0 302 175 1993 131 0 3 chr10 79283568 79283865 -66305423 + AluSx SINE Alu 1 296 -16 981 149 0 83 chr10 79283865 79283902 -66305386 - AluJo/FRAM SINE Alu -127 175 137 538 121 0 121 chr10 79283902 79283966 -66305322 - L1M3 LINE L1 -658 5513 5443 2040 108 0 24 chr10 79286480 79286795 -66302493 - AluSx SINE Alu 0 312 1 460 316 111 39 chr10 79286799 79286825 -66302463 - L1M4 LINE L1 -1704 4442 4419 1723 168 3 16 chr10 79286825 79287128 -66302160 + AluJo SINE Alu 1 299 -13 460 316 111 39 chr10 79287128 79287490 -66301798 - L1M4 LINE L1 -1727 4419 4026 318 150 17 33 chr10 79287591 79287651 -66301637 + AluS SINE Alu 3 61 -240 1739 99 12 0 chr10 79287779 79288021 -66301267 - AluSq SINE Alu -68 245 1 351 60 0 0 chr10 79288227 79288277 -66301011 + (CA)n Simple_repeat Simple_repeat 2 51 0 348 254 74 8 chr10 79288614 79288736 -66300552 - L1ME4a LINE L1 -56 6065 5936 237 220 34 0 chr10 79288758 79288817 -66300471 - L1ME1 LINE L1 -3 6163 6103 293 173 0 19 chr10 79288853 79288905 -66300383 + AluSp SINE Alu 152 202 -101 1076 248 100 53 chr10 79288906 79288964 -66300324 - MLT2B1 LTR ERVL -5 515 461 273 57 0 0 chr10 79288964 79288999 -66300289 + (TG)n Simple_repeat Simple_repeat 2 36 0 1076 248 100 53 chr10 79288999 79289432 -66299856 - MLT2B1 LTR ERVL -59 461 1 246 235 25 25 chr10 79289433 79289514 -66299774 + MLT1K LTR MaLR 505 585 -3 2123 80 10 0 chr10 79289675 79289963 -66299325 - AluSp SINE Alu -21 292 2 903 10 0 0 chr10 79289991 79290093 -66299195 + AluY SINE Alu 195 296 -15 745 202 0 0 chr10 79290093 79290217 -66299071 - AluJo/FLAM SINE Alu -187 125 2 616 205 49 0 chr10 79290222 79290344 -66298944 - AluJb SINE Alu -8 304 177 783 174 101 7 chr10 79291074 79291223 -66298065 - FRAM SINE Alu -12 164 2 22 35 0 0 chr10 79291236 79291265 -66298023 + AT_rich Low_complexity Low_complexity 1 29 0 254 260 74 107 chr10 79291265 79291483 -66297805 - L1ME4a LINE L1 -6 6115 5912 2176 95 7 0 chr10 79291483 79291777 -66297511 - AluSc SINE Alu -13 296 1 254 260 74 107 chr10 79291777 79291924 -66297364 - L1ME4a LINE L1 -209 5912 5762 27 29 0 0 chr10 79291931 79291965 -66297323 + AT_rich Low_complexity Low_complexity 1 34 0 698 161 8 24 chr10 79291967 79292091 -66297197 - FLAM_A SINE Alu -11 122 1 352 286 11 66 chr10 79292094 79292122 -66297166 - L1ME4a LINE L1 -366 5755 5727 1776 168 13 7 chr10 79292122 79292431 -66296857 - AluJo SINE Alu -1 311 1 352 286 11 66 chr10 79292431 79292584 -66296704 - L1ME4a LINE L1 -394 5727 5584 284 236 103 34 chr10 79292619 79292755 -66296533 - L1M2 LINE L1 -694 5462 5327 1988 108 7 10 chr10 79292769 79293066 -66296222 - AluSx SINE Alu -16 296 1 1882 144 0 7 chr10 79293069 79293367 -66295921 - AluSx SINE Alu -16 296 1 1825 278 70 24 chr10 79293390 79294020 -66295268 - MLT2F LTR ERVL -2 661 3 1571 126 0 8 chr10 79294053 79294311 -66294977 - AluSx SINE Alu 0 301 46 896 248 54 2 chr10 79294331 79294577 -66294711 + L1ME LINE L1 5325 5585 -577 2324 71 0 10 chr10 79294802 79295111 -66294177 - AluSg SINE Alu -4 306 1 2039 120 0 10 chr10 79295111 79295412 -66293876 - AluSx SINE Alu -14 298 1 808 236 21 5 chr10 79295414 79295605 -66293683 - MIR SINE MIR -41 221 28 2277 82 3 0 chr10 79295727 79296021 -66293267 - AluSc SINE Alu -14 295 1 2168 81 3 7 chr10 79296026 79296323 -66292965 - AluSg SINE Alu -14 296 1 1026 157 6 6 chr10 79296734 79296893 -66292395 + FRAM SINE Alu 1 159 -7 1808 140 14 59 chr10 79296895 79296941 -66292347 - L1MB8 LINE L1 -9 6169 6122 755 214 0 0 chr10 79296941 79297072 -66292216 - FLAM_A SINE Alu -2 131 1 1808 140 14 59 chr10 79297072 79297382 -66291906 - L1MB8 LINE L1 -56 6122 5829 804 164 0 8 chr10 79297427 79297561 -66291727 + FLAM_C SINE Alu 1 133 0 2175 108 0 7 chr10 79297629 79297935 -66291353 - AluSg1 SINE Alu -3 306 3 292 308 107 60 chr10 79298070 79298304 -66290984 - L2 LINE L2 -190 3082 2838 843 318 61 24 chr10 79298737 79299228 -66290060 + L2 LINE L2 2069 2577 -737 401 91 0 15 chr10 79299269 79299335 -66289953 + AluSp/q SINE Alu 238 302 -11 1810 154 0 33 chr10 79299366 79299672 -66289616 - AluJb SINE Alu -16 296 1 402 296 169 36 chr10 79299759 79300460 -66288828 - L2 LINE L2 0 3272 2465 704 188 0 0 chr10 79301237 79301354 -66287934 + FLAM_A SINE Alu 1 117 -16 195 42 0 0 chr10 79301354 79301378 -66287910 + (TGAA)n Simple_repeat Simple_repeat 3 26 0 2319 86 0 0 chr10 79301395 79301697 -66287591 - AluSg SINE Alu -8 302 1 2071 106 3 7 chr10 79302092 79302385 -66286903 - AluSx SINE Alu -20 292 1 873 192 12 23 chr10 79302410 79302582 -66286706 + MER5A DNA MER1_type 19 188 -1 341 227 8 19 chr10 79302593 79302742 -66286546 - MER5B DNA MER1_type -3 186 1 504 275 35 7 chr10 79302834 79302976 -66286312 + MER5A DNA MER1_type 35 180 -9 638 244 52 35 chr10 79302998 79303170 -66286118 - MER5B DNA MER1_type 0 178 4 1295 170 106 35 chr10 79303178 79303460 -66285828 + AluJb SINE Alu 1 302 0 1097 150 0 0 chr10 79303475 79303648 -66285640 + AluSg/x SINE Alu 137 309 -3 1968 169 174 18 chr10 79303871 79304197 -66285091 - MLT1D LTR MaLR 0 505 93 1926 113 38 10 chr10 79304197 79304488 -66284800 + AluSx SINE Alu 1 299 -13 1968 169 174 18 chr10 79304488 79304598 -66284690 - MLT1D LTR MaLR -412 93 1 1434 159 26 17 chr10 79304660 79304962 -66284326 + L1MA6 LINE L1 5995 6299 -1 2930 174 48 56 chr10 79304991 79305938 -66283350 - LTR13 LTR ERVK 0 1007 16 1885 119 7 11 chr10 79305946 79306231 -66283057 + AluSx SINE Alu 15 298 -14 1467 96 5 14 chr10 79306951 79307160 -66282128 + AluSg/x SINE Alu 86 292 -18 2003 139 3 0 chr10 79307535 79307844 -66281444 + AluSx SINE Alu 1 310 -2 608 258 106 70 chr10 79308113 79308620 -66280668 - L2 LINE L2 -40 3232 2704 239 269 86 11 chr10 79308602 79308695 -66280593 - MIR SINE MIR -2 260 161 * 1987 123 0 13 chr10 79308707 79309049 -66280239 - AluSx SINE Alu 0 312 1 310 214 36 48 chr10 79309611 79309695 -66279593 + L3 LINE CR1 1490 1572 -5 1510 156 14 18 chr10 79309833 79310116 -66279172 - AluJo SINE Alu -17 295 14 1760 167 10 13 chr10 79310322 79310633 -66278655 - AluJo SINE Alu -2 310 1 1388 108 0 0 chr10 79311710 79311904 -66277384 + AluSg/x SINE Alu 106 299 -11 1736 176 0 3 chr10 79311909 79312244 -66277044 + AluJb SINE Alu 1 334 0 959 110 17 35 chr10 79312245 79312418 -66276870 + AluSc SINE Alu 139 308 -1 2082 118 0 16 chr10 79312804 79313119 -66276169 - AluSx SINE Alu 0 312 3 363 295 67 75 chr10 79313126 79313380 -66275908 - L1ME4a LINE L1 0 6121 5870 1879 111 56 3 chr10 79313397 79313685 -66275603 - AluSc SINE Alu -6 303 1 1204 156 9 0 chr10 79313693 79313904 -66275384 - L1MD3 LINE L1 -13 7982 7770 211 71 0 0 chr10 79313905 79313933 -66275355 + (T)n Simple_repeat Simple_repeat 1 180 0 1840 108 0 4 chr10 79313933 79314182 -66275106 - AluSg/x SINE Alu 0 340 65 2240 96 10 7 chr10 79314324 79314626 -66274662 - AluSx SINE Alu -9 303 1 7412 138 86 53 chr10 79315722 79317239 -66272049 - pTR5 LTR ERV1 -143 2295 142 497 247 87 84 chr10 79317255 79317428 -66271860 - L1M2 LINE L1 -727 5573 5402 1350 167 167 0 chr10 79317428 79317561 -66271727 - AluJo SINE Alu -19 293 184 243 0 0 0 chr10 79317561 79317588 -66271700 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1350 167 167 0 chr10 79317588 79317705 -66271583 - AluJo SINE Alu -128 184 1 497 247 87 84 chr10 79317705 79317887 -66271401 - L1M2 LINE L1 -898 5402 5217 2194 121 0 3 chr10 79318071 79318368 -66270920 + AluSx SINE Alu 7 302 -10 337 268 105 42 chr10 79318433 79318516 -66270772 + L1ME3A LINE L1 5968 6044 -126 2108 144 0 7 chr10 79318516 79318822 -66270466 - AluJb SINE Alu -8 304 1 337 268 105 42 chr10 79318822 79318928 -66270360 + L1ME3A LINE L1 6044 6169 -1 2358 86 0 3 chr10 79318989 79319281 -66270007 - AluSg SINE Alu -19 291 1 1967 145 0 13 chr10 79319707 79320010 -66269278 + AluJb SINE Alu 1 299 -13 623 121 0 0 chr10 79321106 79321197 -66268091 - FLAM SINE Alu -11 132 42 561 220 23 8 chr10 79321392 79321524 -66267764 + MLT1D LTR MaLR 1 134 -371 212 226 16 0 chr10 79322024 79322086 -66267202 + (TA)n Simple_repeat Simple_repeat 1 63 0 180 152 0 0 chr10 79322171 79322204 -66267084 + (TAAA)n Simple_repeat Simple_repeat 3 35 0 1490 153 0 0 chr10 79322310 79322532 -66266756 - AluJb SINE Alu -8 304 83 2008 152 3 3 chr10 79322535 79322831 -66266457 - AluJo SINE Alu -16 296 1 234 150 0 0 chr10 79322938 79322978 -66266310 + (TA)n Simple_repeat Simple_repeat 2 41 0 231 36 0 0 chr10 79322978 79323006 -66266282 + (CA)n Simple_repeat Simple_repeat 2 29 0 1987 153 0 17 chr10 79323006 79323301 -66265987 - AluSx SINE Alu -22 290 1 252 220 0 51 chr10 79323393 79323452 -66265836 - L2 LINE L2 0 3313 3258 446 265 48 74 chr10 79323568 79323798 -66265490 - L2 LINE L2 -220 3052 2829 323 211 89 22 chr10 79323858 79323948 -66265340 - MIR SINE MIR -109 153 58 2080 112 18 0 chr10 79324349 79324661 -66264627 - AluSx SINE Alu 0 317 1 1798 132 44 41 chr10 79324661 79324956 -66264332 - AluSx SINE Alu -16 296 1 1197 240 178 22 chr10 79325011 79325391 -66263897 + L1ME3A LINE L1 5450 5916 -254 1968 120 19 19 chr10 79325391 79325699 -66263589 - AluSx SINE Alu -2 310 3 1197 240 178 22 chr10 79325699 79325780 -66263508 + L1ME3A LINE L1 5916 5983 -187 28 86 0 0 chr10 79325962 79326032 -66263256 + GC_rich Low_complexity Low_complexity 1 70 0 227 336 9 45 chr10 79327243 79327353 -66261935 + L3 LINE CR1 297 402 -1175 229 337 40 0 chr10 79330083 79330184 -66259104 + L2 LINE L2 3208 3312 -1 638 284 6 16 chr10 79330474 79330657 -66258631 - MER5A DNA MER1_type -1 188 8 232 239 0 0 chr10 79332187 79332233 -66257055 + CT-rich Low_complexity Low_complexity 1 46 0 203 297 231 0 chr10 79334734 79334825 -66254463 - MIR SINE MIR -29 233 122 2488 77 0 6 chr10 79334828 79335141 -66254147 + AluY SINE Alu 1 311 0 901 223 99 75 chr10 79335145 79335461 -66253827 + L2 LINE L2 2961 3287 -26 1217 117 226 32 chr10 79335461 79335709 -66253579 - AluSg SINE Alu -4 296 1 901 223 99 75 chr10 79335709 79335737 -66253551 + L2 LINE L2 3287 3313 0 181 328 15 30 chr10 79335769 79335836 -66253452 - MIR SINE MIR -189 73 8 592 223 7 29 chr10 79336743 79336882 -66252406 + MIR SINE MIR 47 182 -80 458 336 150 0 chr10 79337076 79337296 -66251992 + MIR SINE MIR 6 258 -4 952 104 56 28 chr10 79337916 79338060 -66251228 + AluSq/x SINE Alu 1 148 -164 395 244 38 76 chr10 79338993 79339039 -66250249 + L1ME4a LINE L1 5818 5864 -257 1936 167 0 23 chr10 79339039 79339345 -66249943 + AluJo SINE Alu 1 299 -13 395 244 38 76 chr10 79339345 79339429 -66249859 + L1ME4a LINE L1 5864 5943 -178 2456 87 0 13 chr10 79339429 79339741 -66249547 + AluSg SINE Alu 1 308 -2 570 251 31 52 chr10 79340198 79340275 -66249013 - MIR SINE MIR 0 262 185 1925 121 7 31 chr10 79340275 79340584 -66248704 - AluSq SINE Alu 0 302 1 570 251 31 52 chr10 79340584 79340696 -66248592 - MIR SINE MIR -77 185 76 2050 118 0 4 chr10 79340816 79341088 -66248200 + AluSx SINE Alu 26 296 -16 344 310 41 14 chr10 79341269 79341414 -66247874 + MER5B DNA MER1_type 1 149 -29 2367 92 3 10 chr10 79341734 79342048 -66247240 - AluSx SINE Alu 0 312 1 2139 144 13 0 chr10 79342078 79342384 -66246904 - AluJo SINE Alu -2 310 1 461 311 0 8 chr10 79342465 79342587 -66246701 + MER91A DNA MER1_type 2 122 -74 30 59 0 0 chr10 79342801 79342852 -66246436 + AT_rich Low_complexity Low_complexity 1 51 0 2005 134 3 33 chr10 79344002 79344309 -66244979 - AluSx SINE Alu -13 299 2 465 303 55 36 chr10 79345696 79345861 -66243427 + MER91A DNA MER1_type 1 168 -28 2114 137 3 3 chr10 79347401 79347700 -66241588 - AluSx SINE Alu -13 299 1 22 0 0 0 chr10 79349167 79349189 -66240099 + GC_rich Low_complexity Low_complexity 1 22 0 419 242 94 11 chr10 79349667 79349970 -66239318 - MER110A LTR ERV1 -1 467 132 581 170 179 0 chr10 79351275 79351387 -66237901 - FLAM_C SINE Alu -1 132 1 2690 40 0 0 chr10 79351390 79351689 -66237599 - AluY SINE Alu -12 299 1 375 313 141 16 chr10 79351726 79351918 -66237370 - MIR SINE MIR -46 216 1 210 222 56 0 chr10 79352501 79352546 -66236742 + MIR SINE MIR 66 116 -146 1837 127 8 0 chr10 79352546 79352806 -66236482 - AluSq SINE Alu -8 305 44 276 258 61 0 chr10 79352853 79352919 -66236369 - L2 LINE L2 0 3313 3244 2291 92 10 0 chr10 79353724 79354017 -66235271 + AluSx SINE Alu 2 297 -15 1862 173 17 10 chr10 79354901 79355202 -66234086 + AluJb SINE Alu 2 304 -8 470 314 0 28 chr10 79355281 79355479 -66233809 - MIR SINE MIR -56 206 18 782 270 86 9 chr10 79355840 79356073 -66233215 - MIR SINE MIR 0 262 12 1382 171 4 21 chr10 79356304 79356538 -66232750 - AluJo SINE Alu -22 290 61 1979 137 10 26 chr10 79357020 79357326 -66231962 + AluSx SINE Alu 1 301 -11 2748 136 50 132 chr10 79357997 79358564 -66230724 + L1MB2 LINE L1 5461 6023 -148 375 125 0 11 chr10 79358564 79358632 -66230656 + Alu SINE Alu 1 51 -251 2748 136 50 132 chr10 79358632 79358764 -66230524 + L1MB2 LINE L1 6023 6164 -7 1826 157 4 11 chr10 79358885 79359166 -66230122 - AluSx SINE Alu -33 279 1 2254 115 7 0 chr10 79359179 79359474 -66229814 - AluSx SINE Alu -11 301 5 2237 102 10 3 chr10 79360109 79360412 -66228876 + AluSq SINE Alu 1 305 -8 234 363 30 15 chr10 79360594 79360729 -66228559 + MIR3 SINE MIR 7 143 -65 342 95 0 32 chr10 79361633 79361696 -66227592 + L1M3 LINE L1 5442 5502 -669 387 160 152 7 chr10 79361697 79361734 -66227554 + FRAM SINE Alu 67 97 -205 1897 147 3 17 chr10 79361734 79362034 -66227254 - AluSx SINE Alu -16 296 1 387 160 152 7 chr10 79362034 79362104 -66227184 + FRAM SINE Alu 97 143 -23 40 0 0 0 chr10 79362104 79362144 -66227144 + AT_rich Low_complexity Low_complexity 1 40 0 1889 162 28 0 chr10 79362162 79362446 -66226842 + AluJb SINE Alu 4 295 -17 27 0 0 0 chr10 79362471 79362498 -66226790 + AT_rich Low_complexity Low_complexity 1 27 0 2072 122 3 11 chr10 79362508 79362825 -66226463 + AluSx SINE Alu 1 315 0 2553 81 0 0 chr10 79363062 79363371 -66225917 + AluY SINE Alu 1 309 -2 410 270 73 15 chr10 79363493 79363630 -66225658 - L1MC4 LINE L1 -138 7904 7760 429 338 54 22 chr10 79364025 79364247 -66225041 + MIR SINE MIR 34 262 0 335 299 175 0 chr10 79364386 79364540 -66224748 + MIR SINE MIR 32 212 -50 753 171 17 0 chr10 79364656 79364773 -66224515 + FLAM_A SINE Alu 1 119 -14 563 276 15 0 chr10 79365327 79365461 -66223827 - L2 LINE L2 0 3272 3137 227 380 114 0 chr10 79365899 79366057 -66223231 - L2 LINE L2 -215 3057 2882 1642 157 45 51 chr10 79366233 79366545 -66222743 - AluJb SINE Alu -1 311 2 366 325 138 0 chr10 79366676 79366836 -66222452 - MER102a DNA MER1_type 0 330 149 1002 194 16 121 chr10 79366862 79367153 -66222135 + LTR16C LTR ERVL 110 430 -61 2076 142 0 0 chr10 79367153 79367448 -66221840 - AluSx SINE Alu -17 295 1 1919 136 63 3 chr10 79367448 79367735 -66221553 - AluJo SINE Alu -8 304 1 1002 194 16 121 chr10 79367735 79367823 -66221465 + LTR16C LTR ERVL 428 450 -41 363 145 14 14 chr10 79367824 79367893 -66221395 + LTR16C LTR ERVL 420 488 -3 1614 184 36 16 chr10 79367925 79368230 -66221058 - AluJo SINE Alu -1 311 1 1946 132 54 14 chr10 79368431 79368727 -66220561 + AluSx SINE Alu 1 308 -4 1935 125 0 21 chr10 79368738 79369017 -66220271 + AluSx SINE Alu 1 273 -39 797 147 0 7 chr10 79369027 79369170 -66220118 + (GGGAA)n Simple_repeat Simple_repeat 4 145 0 204 40 0 0 chr10 79369173 79369198 -66220090 + (GAAA)n Simple_repeat Simple_repeat 4 28 0 477 313 18 40 chr10 79370197 79370421 -66218867 - MIR SINE MIR 0 262 44 374 321 18 0 chr10 79371974 79372086 -66217202 + L2 LINE L2 3136 3249 -23 476 133 44 11 chr10 79372754 79372844 -66216444 + MIR SINE MIR 106 198 -64 2405 79 0 7 chr10 79372916 79373220 -66216068 + AluY SINE Alu 1 302 -9 1737 148 25 6 chr10 79373222 79373546 -66215742 + L1MB4 LINE L1 5821 6150 -30 917 161 0 32 chr10 79373546 79373701 -66215587 + AluJo SINE Alu 1 150 -162 221 0 0 33 chr10 79373746 79373776 -66215512 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2021 62 0 4 chr10 79373949 79374193 -66215095 + AluY SINE Alu 65 307 -4 2642 42 7 0 chr10 79374195 79374502 -66214786 + AluY SINE Alu 1 309 -2 325 295 88 14 chr10 79374572 79374766 -66214522 + MIR SINE MIR 1 203 -59 386 208 20 20 chr10 79375313 79375414 -66213874 - LTR16B LTR ERVL 0 464 364 23 68 0 0 chr10 79376307 79376351 -66212937 + AT_rich Low_complexity Low_complexity 1 44 0 348 237 137 7 chr10 79376416 79376555 -66212733 + MIR SINE MIR 48 204 -58 34 0 0 0 chr10 79376936 79376970 -66212318 + AT_rich Low_complexity Low_complexity 1 34 0 837 183 0 0 chr10 79377000 79377131 -66212157 - FLAM_A SINE Alu -1 132 2 871 301 51 39 chr10 79377180 79377612 -66211676 - MLT1K LTR MaLR 0 588 152 840 203 0 6 chr10 79377712 79377870 -66211418 - AluJb SINE Alu -117 195 39 368 298 117 0 chr10 79378275 79378446 -66210842 - L1MEc LINE L1 -4579 1984 1794 233 239 0 45 chr10 79378542 79378557 -66210731 - L1MEc LINE L1 -4783 1601 1587 2153 154 6 14 chr10 79378557 79378908 -66210380 + MER7A DNA MER2_type 1 346 0 233 239 0 45 chr10 79378908 79378980 -66210308 - L1MEc LINE L1 -4797 1587 1518 331 182 0 182 chr10 79378981 79379068 -66210220 + MLT2B2 LTR ERVL 408 465 -50 482 0 17 0 chr10 79379068 79379126 -66210162 + (TCTA)n Simple_repeat Simple_repeat 3 61 0 331 182 0 182 chr10 79379126 79379170 -66210118 + MLT2B2 LTR ERVL 465 515 0 785 307 23 28 chr10 79379170 79379522 -66209766 - L1MEc LINE L1 -5801 762 413 234 228 0 0 chr10 79379699 79379756 -66209532 + MLT1L LTR MaLR 545 601 -14 1205 143 6 0 chr10 79379756 79379924 -66209364 - AluSx SINE Alu -12 300 132 2355 110 0 0 chr10 79379924 79380233 -66209055 - AluSg1 SINE Alu 0 309 1 2284 138 0 0 chr10 79380258 79380570 -66208718 - AluSx SINE Alu 0 312 1 1127 105 7 20 chr10 79380576 79380729 -66208559 - AluSx SINE Alu -162 151 1 397 282 151 63 chr10 79380824 79381180 -66208108 + L1M4 LINE L1 4026 4420 -1726 1901 167 3 16 chr10 79381180 79381486 -66207802 - AluJo SINE Alu -10 302 1 397 282 151 63 chr10 79381486 79381512 -66207776 + L1M4 LINE L1 4420 4442 -1704 4701 190 181 24 chr10 79381769 79381926 -66207362 + L1MC4 LINE L1 6455 6586 -1456 369 0 0 0 chr10 79381926 79381967 -66207321 + (TG)n Simple_repeat Simple_repeat 1 41 0 4701 190 181 24 chr10 79381967 79382815 -66206473 + L1MC4 LINE L1 6586 7300 -742 2347 92 3 0 chr10 79382815 79383107 -66206181 + AluSq SINE Alu 1 293 -20 2415 87 3 0 chr10 79383108 79383418 -66205870 + AluY SINE Alu 1 311 0 4701 190 181 24 chr10 79383418 79383782 -66205506 + L1MC4 LINE L1 7299 8042 0 854 238 98 107 chr10 79383895 79384222 -66205066 - MLT1H1 LTR MaLR -2 553 230 2102 106 3 14 chr10 79384222 79384515 -66204773 - AluSg SINE Alu -19 291 2 854 238 98 107 chr10 79384515 79384645 -66204643 - MLT1H1 LTR MaLR -325 230 100 2705 145 9 74 chr10 79385249 79385372 -66203916 - L1MB8 LINE L1 -2 6176 6046 1949 152 0 3 chr10 79385372 79385662 -66203626 - AluJb SINE Alu -13 299 11 2705 145 9 74 chr10 79385662 79386055 -66203233 - L1MB8 LINE L1 -132 6046 5699 2199 118 3 0 chr10 79386055 79386351 -66202937 - AluSg SINE Alu -13 297 1 2705 145 9 74 chr10 79386351 79386411 -66202877 - L1MB8 LINE L1 -479 5699 5637 2357 97 3 0 chr10 79386423 79386723 -66202565 - AluSp SINE Alu -12 301 1 728 216 89 51 chr10 79386876 79386927 -66202361 + MIR SINE MIR 18 66 -196 1986 86 4 0 chr10 79386927 79387198 -66202090 + AluSg SINE Alu 36 307 0 728 216 89 51 chr10 79387198 79387381 -66201907 + MIR SINE MIR 66 262 0 954 181 13 0 chr10 79387382 79387537 -66201751 + FRAM SINE Alu 1 157 -9 21 0 0 0 chr10 79387598 79387619 -66201669 + AT_rich Low_complexity Low_complexity 1 21 0 3249 165 21 25 chr10 79388534 79388897 -66200391 - L1MB8 LINE L1 -5 6173 5813 2303 100 21 0 chr10 79388897 79389188 -66200100 + AluSg SINE Alu 1 297 -13 3249 165 21 25 chr10 79389188 79389454 -66199834 - L1MB8 LINE L1 -365 5813 5547 1496 172 8 89 chr10 79389845 79390228 -66199060 - MLT1A2 LTR MaLR -18 356 5 2502 92 0 3 chr10 79390354 79390668 -66198620 - AluSq SINE Alu 0 313 1 399 275 89 25 chr10 79390807 79390984 -66198304 - MIR SINE MIR -44 218 33 432 221 80 0 chr10 79391840 79391953 -66197335 + MIR3 SINE MIR 58 179 -29 1846 125 37 40 chr10 79391965 79392262 -66197026 - AluSx SINE Alu -16 296 1 2019 109 71 3 chr10 79392670 79392953 -66196335 - AluSx SINE Alu -10 302 1 2220 115 0 10 chr10 79393902 79394207 -66195081 + AluSx SINE Alu 1 302 -10 2261 105 10 0 chr10 79394207 79394511 -66194777 + AluSp SINE Alu 1 307 -6 700 247 22 69 chr10 79394530 79394605 -66194683 - MIR SINE MIR 0 262 185 1513 205 3 10 chr10 79394605 79394898 -66194390 + AluJo SINE Alu 1 291 -21 700 247 22 69 chr10 79394898 79395053 -66194235 - MIR SINE MIR -77 185 43 2252 117 3 7 chr10 79395054 79395363 -66193925 + AluSx SINE Alu 1 308 -4 239 197 45 45 chr10 79395818 79395884 -66193404 + AluS SINE Alu 1 66 -237 750 126 7 53 chr10 79396019 79396170 -66193118 + AluSg/x SINE Alu 149 292 -20 2247 91 30 3 chr10 79396180 79396476 -66192812 + AluSx SINE Alu 3 306 -6 182 363 24 24 chr10 79396479 79396603 -66192685 - MER5A DNA MER1_type -64 125 2 1005 125 0 26 chr10 79396683 79396835 -66192453 + AluSg/x SINE Alu 155 302 -8 1712 199 16 0 chr10 79397190 79397497 -66191791 + AluSx SINE Alu 1 312 0 1107 185 6 0 chr10 79397547 79397725 -66191563 - AluJo/FRAM SINE Alu 0 312 134 2455 77 3 0 chr10 79397725 79398025 -66191263 - AluSp SINE Alu -11 302 2 286 196 0 0 chr10 79398053 79398104 -66191184 + AluY SINE Alu 195 245 -56 2502 56 3 3 chr10 79398406 79398710 -66190578 + AluY SINE Alu 1 304 -7 262 177 48 32 chr10 79398781 79398843 -66190445 + L1ME3 LINE L1 6020 6082 -80 347 122 0 56 chr10 79398948 79399038 -66190250 + (GAAA)n Simple_repeat Simple_repeat 4 88 0 518 252 81 62 chr10 79399047 79399137 -66190151 + MIR SINE MIR 49 136 -126 1716 179 3 19 chr10 79399137 79399450 -66189838 + AluJo SINE Alu 1 308 -4 518 252 81 62 chr10 79399450 79399569 -66189719 + MIR SINE MIR 136 262 0 2367 96 7 0 chr10 79400725 79401027 -66188261 - AluSg SINE Alu -6 304 1 1847 144 12 47 chr10 79401031 79401350 -66187938 - AluJb SINE Alu 0 312 5 25 0 0 0 chr10 79401952 79401977 -66187311 + GC_rich Low_complexity Low_complexity 1 25 0 256 209 23 70 chr10 79402226 79402355 -66186933 + G-rich Low_complexity Low_complexity 2 124 0 246 99 14 42 chr10 79402628 79402699 -66186589 + (CCCCG)n Simple_repeat Simple_repeat 1 69 0 30 69 0 0 chr10 79402712 79402770 -66186518 + GC_rich Low_complexity Low_complexity 1 58 0 287 274 69 39 chr10 79403422 79403524 -66185764 + MIR SINE MIR 5 109 -153 1554 81 0 10 chr10 79403524 79403722 -66185566 - AluSg/x SINE Alu -22 290 95 353 225 135 0 chr10 79403810 79403899 -66185389 + MIR SINE MIR 141 241 -21 1195 66 0 0 chr10 79403909 79404045 -66185243 + AluSg SINE Alu 1 136 -174 283 289 237 0 chr10 79404047 79404144 -66185144 + L2 LINE L2 3146 3265 -7 1297 184 132 23 chr10 79405340 79405606 -66183682 - AluJb SINE Alu -7 295 1 309 214 36 48 chr10 79406168 79406252 -66183036 + L3 LINE CR1 1490 1572 -5 1733 153 10 17 chr10 79406390 79406678 -66182610 - AluJo SINE Alu -17 295 10 1904 168 10 13 chr10 79406879 79407189 -66182099 - AluJo SINE Alu -3 309 1 464 198 74 8 chr10 79407540 79407661 -66181627 + L2 LINE L2 3184 3312 -1 498 298 78 37 chr10 79407942 79408133 -66181155 - MIR SINE MIR -5 257 59 189 107 0 0 chr10 79408308 79408336 -66180952 + (TTCA)n Simple_repeat Simple_repeat 3 30 0 229 327 69 83 chr10 79408352 79408701 -66180587 - L2 LINE L2 -49 3264 2921 1013 117 0 0 chr10 79408711 79408848 -66180440 + AluJb SINE Alu 163 299 -13 231 268 61 0 chr10 79408853 79408935 -66180353 - L2 LINE L2 -360 2912 2826 497 312 124 57 chr10 79409432 79409746 -66179542 + L2 LINE L2 2924 3258 -14 2344 109 0 6 chr10 79410070 79410382 -66178906 + AluSx SINE Alu 1 310 -2 424 196 42 173 chr10 79410566 79410590 -66178698 + MIR SINE MIR 76 102 -160 2051 137 3 13 chr10 79410590 79410896 -66178392 - AluJb SINE Alu -9 303 1 424 196 42 173 chr10 79410896 79410991 -66178297 + MIR SINE MIR 102 208 -54 1203 107 38 84 chr10 79410991 79411200 -66178088 - L1MA8 LINE L1 -2 6289 6093 1493 159 144 0 chr10 79411200 79411334 -66177954 - AluSx SINE Alu -18 294 181 414 0 0 0 chr10 79411334 79411380 -66177908 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 1493 159 144 0 chr10 79411380 79411502 -66177786 - AluSx SINE Alu -131 181 1 1203 107 38 84 chr10 79411502 79411555 -66177733 - L1MA8 LINE L1 -198 6093 6039 424 196 42 173 chr10 79411555 79411648 -66177640 + MIR SINE MIR 208 261 -1 197 183 0 133 chr10 79411715 79411775 -66177513 + L2 LINE L2 2430 2481 -833 495 277 89 30 chr10 79411790 79411992 -66177296 + MIR SINE MIR 48 261 -1 207 280 0 0 chr10 79412158 79412208 -66177080 + CT-rich Low_complexity Low_complexity 3 52 0 341 99 0 62 chr10 79412210 79412291 -66176997 + (TTCC)n Simple_repeat Simple_repeat 1 76 0 2333 107 3 0 chr10 79412323 79412622 -66176666 + AluSp SINE Alu 1 300 -13 243 121 12 205 chr10 79412631 79412668 -66176620 - L2 LINE L2 -45 3268 3254 2066 127 14 7 chr10 79412668 79412959 -66176329 + AluSx SINE Alu 1 293 -19 243 121 12 205 chr10 79412959 79413004 -66176284 - L2 LINE L2 -59 3254 3202 1747 110 23 19 chr10 79413004 79413268 -66176020 + AluSx SINE Alu 35 299 -13 301 256 79 74 chr10 79413271 79413486 -66175802 + L1ME4a LINE L1 5900 6115 -6 22 35 0 0 chr10 79413486 79413515 -66175773 + AT_rich Low_complexity Low_complexity 1 29 0 736 152 38 38 chr10 79413528 79413660 -66175628 + FLAM_A SINE Alu 2 133 0 2367 77 0 10 chr10 79413983 79414280 -66175008 - AluSg SINE Alu -16 294 1 2176 120 0 10 chr10 79414280 79414580 -66174708 - AluSx SINE Alu -15 297 1 814 236 21 5 chr10 79414582 79414773 -66174515 - MIR SINE MIR -41 221 28 2421 82 3 0 chr10 79414895 79415189 -66174099 - AluSc SINE Alu -14 295 1 2379 81 3 0 chr10 79415194 79415489 -66173799 - AluSg SINE Alu -14 296 1 1052 157 6 6 chr10 79415900 79416059 -66173229 + FRAM SINE Alu 1 159 -7 1816 143 14 59 chr10 79416061 79416107 -66173181 - L1MB8 LINE L1 -9 6169 6122 778 214 0 0 chr10 79416107 79416238 -66173050 - FLAM_A SINE Alu -2 131 1 1816 143 14 59 chr10 79416238 79416548 -66172740 - L1MB8 LINE L1 -56 6122 5829 804 164 0 8 chr10 79416593 79416727 -66172561 + FLAM_C SINE Alu 1 133 0 2191 107 0 7 chr10 79416796 79417104 -66172184 - AluSg1 SINE Alu -3 306 1 288 308 107 60 chr10 79417237 79417471 -66171817 - L2 LINE L2 -190 3082 2838 960 310 61 22 chr10 79417904 79418394 -66170894 + L2 LINE L2 2069 2577 -737 414 109 0 0 chr10 79418435 79418499 -66170789 + AluSp/q SINE Alu 238 301 -12 1810 154 0 33 chr10 79418530 79418836 -66170452 - AluJb SINE Alu -16 296 1 402 296 169 36 chr10 79418923 79419624 -66169664 - L2 LINE L2 0 3272 2465 704 188 0 0 chr10 79420401 79420518 -66168770 + FLAM_A SINE Alu 1 117 -16 195 42 0 0 chr10 79420518 79420542 -66168746 + (TGAA)n Simple_repeat Simple_repeat 3 26 0 2319 86 0 0 chr10 79420559 79420861 -66168427 - AluSg SINE Alu -8 302 1 2080 105 3 7 chr10 79421256 79421550 -66167738 - AluSx SINE Alu -19 293 1 954 195 12 6 chr10 79421575 79421744 -66167544 + MER5A DNA MER1_type 19 188 -1 341 227 8 19 chr10 79421755 79421904 -66167384 - MER5B DNA MER1_type -3 186 1 504 275 35 7 chr10 79421996 79422138 -66167150 + MER5A DNA MER1_type 35 180 -9 638 244 52 35 chr10 79422160 79422332 -66166956 - MER5B DNA MER1_type 0 178 4 1295 170 106 35 chr10 79422340 79422622 -66166666 + AluJb SINE Alu 1 302 0 1106 150 0 0 chr10 79422637 79422810 -66166478 + AluSg/x SINE Alu 135 307 -3 1953 172 174 18 chr10 79423033 79423359 -66165929 - MLT1D LTR MaLR 0 505 93 1933 110 38 10 chr10 79423359 79423649 -66165639 + AluSx SINE Alu 1 298 -14 1953 172 174 18 chr10 79423649 79423759 -66165529 - MLT1D LTR MaLR -412 93 1 1437 159 26 17 chr10 79423821 79424123 -66165165 + L1MA6 LINE L1 5995 6299 -1 2900 175 48 57 chr10 79424152 79425100 -66164188 - LTR13 LTR ERVK 0 1007 16 1928 119 3 11 chr10 79425108 79425394 -66163894 + AluSx SINE Alu 15 298 -14 1467 96 5 14 chr10 79426115 79426324 -66162964 + AluSg/x SINE Alu 86 292 -18 2003 139 3 0 chr10 79426699 79427008 -66162280 + AluSx SINE Alu 1 310 -2 605 259 106 70 chr10 79427277 79427784 -66161504 - L2 LINE L2 -40 3232 2704 229 288 59 17 chr10 79427766 79427884 -66161404 - MIR SINE MIR -2 260 138 * 2026 128 0 3 chr10 79427898 79428211 -66161077 - AluSx SINE Alu 0 312 1 193 152 0 0 chr10 79428246 79428279 -66161009 - MIR SINE MIR -128 134 102 607 133 178 37 chr10 79428408 79428543 -66160745 + MER20 DNA MER1_type 1 154 -65 1800 143 16 32 chr10 79428648 79428962 -66160326 - AluJo SINE Alu -1 311 3 908 234 67 35 chr10 79430133 79430383 -66158905 - MER46C DNA MER2_type -6 332 69 2013 138 0 0 chr10 79430383 79430679 -66158609 - AluSx SINE Alu -16 296 1 908 234 67 35 chr10 79430679 79430740 -66158548 - MER46C DNA MER2_type -269 69 11 204 254 32 0 chr10 79431895 79431958 -66157330 + (TATG)n Simple_repeat Simple_repeat 4 68 0 3430 111 9 47 chr10 79431958 79432310 -66156978 + MER4B LTR ERV1 1 326 -284 1989 113 24 3 chr10 79432310 79432603 -66156685 - AluSq SINE Alu -14 299 1 3430 111 9 47 chr10 79432603 79432809 -66156479 + MER4B LTR ERV1 326 538 -72 348 254 74 8 chr10 79433127 79433249 -66156039 - L1ME4a LINE L1 -56 6065 5936 237 220 34 0 chr10 79433271 79433330 -66155958 - L1ME1 LINE L1 -3 6163 6103 1140 96 0 0 chr10 79433372 79433529 -66155759 + AluSp/q SINE Alu 157 313 0 255 257 14 71 chr10 79433734 79433804 -66155484 + MLT1K LTR MaLR 108 173 -415 426 276 154 0 chr10 79433948 79434104 -66155184 + MLT1K LTR MaLR 409 588 0 1781 137 3 7 chr10 79434159 79434452 -66154836 + AluSx SINE Alu 1 292 -20 2114 103 7 0 chr10 79434462 79434753 -66154535 + AluSx SINE Alu 3 295 -17 1809 122 14 27 chr10 79434967 79435262 -66154026 + AluJo SINE Alu 11 301 -11 415 206 22 22 chr10 79435851 79435943 -66153345 - MLT1J LTR MaLR -419 92 1 1816 196 72 100 chr10 79436068 79436132 -66153156 - MLT1E3 LTR MaLR 0 624 560 2252 67 0 0 chr10 79436132 79436451 -66152837 - AluY SINE Alu 0 319 1 1816 196 72 100 chr10 79436451 79436463 -66152825 - MLT1E3 LTR MaLR -64 560 549 2343 70 0 0 chr10 79436463 79436748 -66152540 - AluSc SINE Alu -24 285 1 1816 196 72 100 chr10 79436748 79437311 -66151977 - MLT1E3 LTR MaLR -75 549 1 386 237 11 0 chr10 79437872 79437965 -66151323 + L1MC5 LINE L1 7321 7414 -547 1703 148 0 7 chr10 79438037 79438314 -66150974 + AluJb SINE Alu 36 310 -2 31 0 0 0 chr10 79438314 79438345 -66150943 + AT_rich Low_complexity Low_complexity 1 31 0 2115 112 0 0 chr10 79438366 79438661 -66150627 - AluSx SINE Alu -17 295 1 2403 56 0 3 chr10 79438860 79439165 -66150123 - AluY SINE Alu -7 304 1 510 274 71 28 chr10 79439198 79439453 -66149835 + L1MC4a LINE L1 5570 5835 -1973 562 303 45 18 chr10 79440564 79440785 -66148503 + MIR SINE MIR 24 250 -12 202 276 13 40 chr10 79442246 79442322 -66146966 - MER5A DNA MER1_type 0 189 116 907 110 0 21 chr10 79442339 79442484 -66146804 - FRAM SINE Alu -4 172 31 1983 114 0 0 chr10 79442490 79442798 -66146490 - AluSc SINE Alu 0 308 1 266 254 0 30 chr10 79442798 79442865 -66146423 + MER5B DNA MER1_type 114 178 0 837 128 8 23 chr10 79443414 79443547 -66145741 - FLAM_C SINE Alu -10 133 3 199 105 53 0 chr10 79443590 79443628 -66145660 + L2 LINE L2 3269 3308 -5 300 310 60 9 chr10 79443796 79443912 -66145376 - MARNA DNA Mariner -9 577 456 1015 136 0 0 chr10 79444218 79444365 -66144923 - AluSp SINE Alu -20 293 147 1670 157 17 13 chr10 79444860 79445159 -66144129 - AluJo SINE Alu -12 300 1 333 193 121 12 chr10 79445295 79445378 -66143910 + L1ME4a LINE L1 6029 6120 -1 470 264 78 43 chr10 79445435 79445618 -66143670 - MIR SINE MIR -62 146 4 1959 126 0 10 chr10 79445834 79446143 -66143145 - AluSx SINE Alu -3 309 4 2288 89 0 3 chr10 79446393 79446697 -66142591 - AluSx SINE Alu -9 303 1 1277 185 85 22 chr10 79446778 79447018 -66142270 + MER2 DNA MER2_type 1 267 -78 2132 120 0 0 chr10 79447018 79447327 -66141961 - AluSx SINE Alu -3 309 1 1277 185 85 22 chr10 79447327 79447405 -66141883 + MER2 DNA MER2_type 267 339 -6 1910 140 74 0 chr10 79447701 79448037 -66141251 + MER46B DNA MER2_type 1 236 0 1635 152 12 53 chr10 79448098 79448420 -66140868 - AluJb SINE Alu -3 309 1 2152 110 0 0 chr10 79448647 79448937 -66140351 - AluSx SINE Alu -22 290 1 2189 105 0 3 chr10 79448941 79449245 -66140043 - AluSq SINE Alu -10 303 1 23 33 0 0 chr10 79449278 79449308 -66139980 + AT_rich Low_complexity Low_complexity 1 30 0 2424 59 0 3 chr10 79450396 79450700 -66138588 - AluY SINE Alu -8 303 1 23 0 0 0 chr10 79450750 79450773 -66138515 + AT_rich Low_complexity Low_complexity 1 23 0 1877 120 36 0 chr10 79450773 79451049 -66138239 - AluSx SINE Alu -26 286 1 2035 123 3 13 chr10 79451052 79451362 -66137926 - AluSx SINE Alu 0 312 6 2119 105 20 3 chr10 79452029 79452334 -66136954 + AluSq SINE Alu 1 310 -3 477 309 100 54 chr10 79453933 79454282 -66135006 + L2 LINE L2 2949 3313 0 560 284 84 40 chr10 79454729 79454979 -66134309 + MIR SINE MIR 2 262 0 25 0 0 0 chr10 79455228 79455253 -66134035 + AT_rich Low_complexity Low_complexity 1 25 0 1871 162 0 9 chr10 79455362 79455677 -66133611 - AluJb SINE Alu 0 312 1 186 43 0 0 chr10 79455693 79455716 -66133572 + (A)n Simple_repeat Simple_repeat 1 23 0 1723 148 32 4 chr10 79455851 79456128 -66133160 - AluJb SINE Alu -26 286 2 1958 92 46 3 chr10 79456413 79456695 -66132593 + AluSx SINE Alu 1 294 -18 1082 223 33 30 chr10 79456827 79457128 -66132160 + L1ME3A LINE L1 5866 6167 -3 2074 94 0 20 chr10 79457313 79457611 -66131677 - AluSg SINE Alu -10 300 9 2544 36 0 0 chr10 79458264 79458567 -66130721 - AluY SINE Alu -8 303 1 1462 103 0 83 chr10 79458567 79458747 -66130541 - AluSx SINE Alu 0 312 119 208 51 26 26 chr10 79458747 79458786 -66130502 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2133 91 3 0 chr10 79458786 79459071 -66130217 - AluSp SINE Alu -27 286 1 1462 103 0 83 chr10 79459071 79459189 -66130099 - AluSx SINE Alu -191 121 38 2038 116 0 13 chr10 79459608 79459918 -66129370 - L1M3 LINE L1 -375 5805 5500 919 129 7 7 chr10 79459924 79460064 -66129224 - AluJo/FRAM SINE Alu -11 301 162 2110 90 7 0 chr10 79460066 79460355 -66128933 + AluSx SINE Alu 1 291 -21 246 235 25 25 chr10 79460516 79460597 -66128691 - MLT1K LTR MaLR -3 585 505 1093 246 100 53 chr10 79460598 79461031 -66128257 + MLT2B1 LTR ERVL 1 461 -59 273 57 0 0 chr10 79461031 79461066 -66128222 + (CA)n Simple_repeat Simple_repeat 2 36 0 1093 246 100 53 chr10 79461066 79461124 -66128164 + MLT2B1 LTR ERVL 461 515 -5 293 173 0 19 chr10 79461125 79461177 -66128111 - AluSp SINE Alu -101 202 152 237 220 34 0 chr10 79461213 79461272 -66128016 + L1ME1 LINE L1 6103 6163 -3 348 254 74 8 chr10 79461294 79461416 -66127872 + L1ME4a LINE L1 5936 6065 -56 363 285 146 0 chr10 79461833 79461956 -66127332 + MIR SINE MIR 53 193 -69 2160 99 3 3 chr10 79461958 79462262 -66127026 - AluSq SINE Alu -9 304 1 1730 57 0 0 chr10 79462593 79462803 -66126485 + L1PA8 LINE L1 5960 6169 -3 526 315 135 17 chr10 79462853 79463335 -66125953 + L1MC4a LINE L1 5627 6165 -1643 2514 39 0 10 chr10 79463685 79463994 -66125294 + AluYa5 SINE Alu 1 306 -5 1643 108 74 139 chr10 79463994 79464374 -66124914 + L1MB3 LINE L1 5828 6182 -1 2110 117 0 3 chr10 79464591 79464900 -66124388 - AluSc SINE Alu -1 308 1 636 115 29 29 chr10 79464900 79465004 -66124284 - AluSq/x SINE Alu -175 138 35 275 167 13 154 chr10 79465004 79465044 -66124244 + L2 LINE L2 3202 3227 -86 2051 115 14 0 chr10 79465044 79465332 -66123956 - AluSx SINE Alu -20 292 1 275 167 13 154 chr10 79465332 79465369 -66123919 + L2 LINE L2 3227 3268 -45 2182 107 3 0 chr10 79465378 79465677 -66123611 - AluSp SINE Alu -13 300 1 341 99 0 62 chr10 79465709 79465790 -66123498 + (GGAA)n Simple_repeat Simple_repeat 1 76 0 215 295 16 39 chr10 79466057 79466171 -66123117 - MIR3 SINE MIR -53 155 85 1268 70 0 0 chr10 79466396 79466553 -66122735 - AluY SINE Alu -154 157 1 958 268 96 0 chr10 79466554 79466867 -66122421 - L1ME LINE L1 -471 5699 5357 812 126 0 8 chr10 79466915 79467172 -66122116 + AluSx SINE Alu 46 301 0 1825 275 72 24 chr10 79467205 79467834 -66121454 + MLT2F LTR ERVL 3 661 -2 1963 135 0 3 chr10 79467857 79468154 -66121134 + AluSx SINE Alu 1 296 -16 1023 178 0 0 chr10 79468157 79468326 -66120962 + AluJo SINE Alu 1 169 -143 2232 89 0 13 chr10 79518419 79518723 -66070565 + AluY SINE Alu 1 300 -11 737 226 95 63 chr10 79518742 79519141 -66070147 + L1MB5 LINE L1 3173 3584 -2562 475 225 27 0 chr10 79519140 79519251 -66070037 + L1MB5 LINE L1 4744 4857 -1289 * 708 225 51 83 chr10 79519270 79519553 -66069735 + L1MB5 LINE L1 4965 5235 -911 192 77 0 0 chr10 79519553 79519579 -66069709 + (TG)n Simple_repeat Simple_repeat 2 27 0 708 225 51 83 chr10 79519579 79519669 -66069619 + L1MB5 LINE L1 5235 5326 -820 851 145 27 24 chr10 79519671 79519837 -66069451 + L1MB8 LINE L1 5660 5826 -352 * 2264 324 99 17 chr10 79519833 79520608 -66068680 + L1MB5 LINE L1 5336 6174 0 444 284 59 41 chr10 79520663 79520832 -66068456 + L1MC/D LINE L1 5536 5707 -2101 2185 118 16 0 chr10 79520915 79521220 -66068068 - AluSx SINE Alu -2 310 1 34 0 0 0 chr10 79521515 79521549 -66067739 + AT_rich Low_complexity Low_complexity 1 34 0 210 91 0 0 chr10 79521636 79521669 -66067619 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1875 113 68 4 chr10 79521671 79521936 -66067352 - AluSx SINE Alu -30 282 1 203 180 60 0 chr10 79522135 79522185 -66067103 - MIR SINE MIR -62 200 148 204 315 0 0 chr10 79522298 79522352 -66066936 + L3 LINE CR1 1506 1559 -18 574 236 14 14 chr10 79523118 79523266 -66066022 - AluSc SINE Alu -160 149 2 1650 183 31 0 chr10 79523305 79523594 -66065694 + AluJb SINE Alu 6 303 -9 437 306 68 7 chr10 79524225 79524372 -66064916 - MIR3 SINE MIR -23 185 30 2411 44 0 31 chr10 79524873 79525193 -66064095 + AluY SINE Alu 1 310 -1 2433 42 3 7 chr10 79525348 79525635 -66063653 + AluY SINE Alu 19 304 -7 30 27 0 0 chr10 79525643 79525680 -66063608 + AT_rich Low_complexity Low_complexity 1 37 0 1168 230 92 14 chr10 79525712 79526201 -66063087 - L1ME4a LINE L1 -72 6049 5490 231 130 0 22 chr10 79526577 79526623 -66062665 + (TC)n Simple_repeat Simple_repeat 1 45 0 297 0 0 0 chr10 79526623 79526656 -66062632 + (TG)n Simple_repeat Simple_repeat 2 34 0 915 192 0 0 chr10 79526945 79527101 -66062187 - AluJo SINE Alu -6 306 151 295 167 0 60 chr10 79527101 79527185 -66062103 - AluJo SINE Alu -194 108 30 1980 89 3 34 chr10 79527280 79527572 -66061716 + AluSp SINE Alu 22 304 -9 1186 124 148 5 chr10 79527572 79527782 -66061506 + AluSg1 SINE Alu 56 295 -14 2430 69 7 10 chr10 79527950 79528254 -66061034 - AluY SINE Alu -8 303 1 2087 109 0 7 chr10 79528279 79528564 -66060724 - AluSg SINE Alu 0 310 28 3361 178 37 14 chr10 79528720 79529373 -66059915 - L1MB7 LINE L1 -38 6146 5479 3123 234 29 44 chr10 79529363 79530093 -66059195 - L1M4 LINE L1 -5729 813 95 * 2205 121 0 0 chr10 79530093 79530390 -66058898 - AluSg SINE Alu -13 297 1 3123 234 29 44 chr10 79530390 79530484 -66058804 - L1M4 LINE L1 -6447 95 1 28 0 0 0 chr10 79530501 79530529 -66058759 + AT_rich Low_complexity Low_complexity 1 28 0 771 128 73 0 chr10 79530554 79530663 -66058625 - FLAM_C SINE Alu -16 117 1 1386 317 53 85 chr10 79530703 79531344 -66057944 - L1MD2 LINE L1 -15 6344 5684 2337 113 0 0 chr10 79531344 79531654 -66057634 - AluSg SINE Alu 0 310 1 1479 198 20 27 chr10 79531656 79531954 -66057334 - AluJo SINE Alu -16 296 1 1386 317 53 85 chr10 79531954 79532053 -66057235 - L1MD2 LINE L1 -676 5683 5628 467 250 89 48 chr10 79532068 79532316 -66056972 - L1M4 LINE L1 -3561 2585 2328 316 188 26 128 chr10 79532337 79532378 -66056910 - L1M4 LINE L1 -3805 2341 2297 1437 51 28 0 chr10 79532378 79532554 -66056734 - L1PA4 LINE L1 0 6155 5975 316 188 26 128 chr10 79532554 79532629 -66056659 - L1M4 LINE L1 -3849 2297 2237 1477 186 56 0 chr10 79532632 79532917 -66056371 + AluJo SINE Alu 2 302 -10 245 363 20 20 chr10 79533268 79533370 -66055918 - L2 LINE L2 -219 3053 2952 386 195 242 8 chr10 79533473 79533601 -66055687 + MER104 DNA Tc2 23 180 0 1053 172 0 17 chr10 79534620 79534794 -66054494 - AluJb SINE Alu -21 291 121 869 148 0 40 chr10 79534797 79534859 -66054429 - FLAM_C SINE Alu 0 184 121 1570 167 4 0 chr10 79534859 79535105 -66054183 - AluJo SINE Alu -65 247 1 869 148 0 40 chr10 79535105 79535232 -66054056 - FLAM_C SINE Alu -63 121 1 1701 137 4 19 chr10 79535541 79535811 -66053477 - AluJo SINE Alu -33 279 14 2485 62 3 0 chr10 79535882 79536186 -66053102 + AluY SINE Alu 1 305 -6 354 118 0 0 chr10 79536979 79537030 -66052258 - L1MA10 LINE L1 0 6334 6284 1636 205 0 7 chr10 79537549 79537717 -66051571 - AluJo SINE Alu -11 301 134 2407 87 3 0 chr10 79537717 79538016 -66051272 - AluSx SINE Alu -12 300 1 1636 205 0 7 chr10 79538016 79538150 -66051138 - AluJo SINE Alu -178 134 1 22 0 0 0 chr10 79538594 79538616 -66050672 + AT_rich Low_complexity Low_complexity 1 22 0 598 198 45 19 chr10 79538768 79538925 -66050363 + L1ME2 LINE L1 5791 5951 -213 264 252 46 73 chr10 79538972 79539123 -66050165 + L1MC4 LINE L1 7837 7983 -59 2168 125 3 10 chr10 79539168 79539481 -66049807 + AluSx SINE Alu 1 311 -1 291 298 11 21 chr10 79540157 79540251 -66049037 - MIR SINE MIR -98 110 18 559 165 0 0 chr10 79540282 79540361 -66048927 - AluJ/FRAM SINE Alu -16 296 218 780 186 8 0 chr10 79540361 79540485 -66048803 - AluJo/FLAM SINE Alu -177 125 1 2436 81 3 0 chr10 79540491 79540788 -66048500 - AluSx SINE Alu -14 298 1 1984 153 7 0 chr10 79541271 79541572 -66047716 - AluJb SINE Alu -9 303 1 207 209 0 0 chr10 79541743 79541786 -66047502 + T-rich Low_complexity Low_complexity 1 43 0 1898 161 0 10 chr10 79542043 79542342 -66046946 + AluJb SINE Alu 1 296 -16 2122 110 3 3 chr10 79542441 79542731 -66046557 - AluY SINE Alu -21 290 1 367 208 208 0 chr10 79542944 79543040 -66046248 - MLT2E LTR ERVL -1 627 512 638 328 10 15 chr10 79543223 79543418 -66045870 - MLT2E LTR ERVL -392 236 43 422 215 65 0 chr10 79544085 79544178 -66045110 - MIR SINE MIR -39 223 125 1388 194 114 0 chr10 79545138 79545411 -66043877 - AluSx SINE Alu -8 304 1 1554 191 86 21 chr10 79545533 79545905 -66043383 + MSTD LTR MaLR 1 396 0 183 256 0 0 chr10 79545960 79545999 -66043289 + L2 LINE L2 3180 3218 -95 4616 128 14 70 chr10 79546464 79547278 -66042010 - Tigger1 DNA MER2_type 0 2418 1651 224 262 151 29 chr10 79548180 79548341 -66040947 - MIR SINE MIR -46 216 38 840 140 14 14 chr10 79548846 79548989 -66040299 - FRAM SINE Alu -5 171 29 1058 129 24 24 chr10 79549026 79549196 -66040092 + AluSg/x SINE Alu 130 299 -11 2467 64 0 19 chr10 79549221 79549532 -66039756 - AluY SINE Alu -6 305 1 1796 154 25 11 chr10 79549620 79549906 -66039382 - AluJo SINE Alu -21 291 2 334 218 58 46 chr10 79550003 79550090 -66039198 + MIR3 SINE MIR 73 160 -48 2451 93 0 0 chr10 79550091 79550403 -66038885 - AluSx SINE Alu 0 312 1 1134 139 8 176 chr10 79550478 79550831 -66038457 + AluJb SINE Alu 5 298 -4 1879 111 6 86 chr10 79551073 79551397 -66037891 + AluSx SINE Alu 1 298 -14 309 326 48 41 chr10 79551992 79552139 -66037149 - MIR SINE MIR -61 147 9 235 255 35 0 chr10 79553592 79553660 -66035628 + CT-rich Low_complexity Low_complexity 1 70 0 1994 160 0 0 chr10 79554169 79554476 -66034812 - AluJo SINE Alu 0 312 6 1964 122 16 38 chr10 79554878 79555197 -66034091 + AluSx SINE Alu 1 312 0 1876 97 3 35 chr10 79555264 79555594 -66033694 - AluSc SINE Alu 0 321 1 610 271 16 32 chr10 79556082 79556270 -66033018 + MER5A DNA MER1_type 1 185 -4 2234 118 0 0 chr10 79556402 79556706 -66032582 + AluSx SINE Alu 1 304 -8 661 252 41 28 chr10 79556713 79556889 -66032399 + MIR SINE MIR 29 210 -52 1394 176 18 76 chr10 79556889 79557218 -66032070 + AluJb SINE Alu 1 310 -2 661 252 41 28 chr10 79557218 79557259 -66032029 + MIR SINE MIR 210 249 -13 1667 164 6 56 chr10 79558026 79558349 -66030939 + AluJo SINE Alu 1 307 -5 515 250 76 31 chr10 79558366 79558590 -66030698 + L1ME LINE L1 5490 5723 -398 1610 164 22 4 chr10 79558696 79558965 -66030323 + AluJb SINE Alu 1 274 -38 407 265 7 7 chr10 79559436 79559572 -66029716 + MER113 DNA MER1_type? 3 138 -383 944 146 62 0 chr10 79559603 79559773 -66029515 + AluSg/x SINE Alu 137 312 0 265 271 0 14 chr10 79559867 79559937 -66029351 + MER113 DNA MER1_type? 453 521 0 206 204 143 0 chr10 79560446 79560495 -66028793 + L2 LINE L2 3256 3311 -2 551 295 122 36 chr10 79561143 79561254 -66028034 + L2 LINE L2 2684 2784 -529 783 212 106 45 chr10 79561254 79561452 -66027836 + MER63A DNA MER1_type 1 210 0 551 295 122 36 chr10 79561452 79561721 -66027567 + L2 LINE L2 2784 3111 -202 222 279 140 73 chr10 79561992 79562115 -66027173 - MIR SINE MIR -27 235 95 2232 109 0 34 chr10 79562115 79562436 -66026852 + AluSx SINE Alu 1 310 -2 222 279 140 73 chr10 79562436 79562491 -66026797 - MIR SINE MIR -167 95 45 323 254 218 7 chr10 79562525 79562667 -66026621 + MER5A DNA MER1_type 18 189 0 488 127 25 0 chr10 79563127 79563206 -66026082 - Charlie5 DNA MER1_type -27 2585 2505 1784 116 91 11 chr10 79563209 79563484 -66025804 + AluSx SINE Alu 1 297 -15 804 104 45 0 chr10 79563484 79563618 -66025670 - Charlie5 DNA MER1_type -2423 189 50 858 140 0 28 chr10 79563742 79563885 -66025403 + FLAM_C SINE Alu 5 143 0 222 297 78 23 chr10 79564153 79564315 -66024973 + MER5B DNA MER1_type 1 186 -3 23 33 0 0 chr10 79565282 79565312 -66023976 + GC_rich Low_complexity Low_complexity 1 30 0 207 0 0 0 chr10 79566018 79566041 -66023247 + (TA)n Simple_repeat Simple_repeat 2 24 0 2267 84 3 3 chr10 79566041 79566328 -66022960 - AluSq SINE Alu -18 295 9 342 299 137 8 chr10 79566909 79567026 -66022262 - MIR3 SINE MIR -39 169 38 3896 142 35 22 chr10 79567389 79568016 -66021272 + MER41B LTR ERV1 1 635 0 193 194 45 75 chr10 79568018 79568085 -66021203 - MIR SINE MIR -70 192 128 1512 105 5 9 chr10 79568289 79568303 -66020985 - AluSg SINE Alu 0 312 299 336 22 0 22 chr10 79568303 79568348 -66020940 + (TTA)n Simple_repeat Simple_repeat 2 180 0 1512 105 5 9 chr10 79568348 79568552 -66020736 - AluSg SINE Alu -13 299 82 * 2568 50 3 0 chr10 79568551 79568852 -66020436 - AluY SINE Alu -9 302 1 678 109 0 0 chr10 79568852 79568944 -66020344 - AluSg SINE Alu -217 93 2 328 300 115 8 chr10 79569162 79569292 -66019996 - MIR3 SINE MIR -46 162 19 260 365 118 12 chr10 79569672 79569842 -66019446 - MIR3 SINE MIR -15 193 6 1950 129 21 0 chr10 79570443 79570757 -66018531 - AluSq SINE Alu 0 320 1 1315 154 20 125 chr10 79571003 79571346 -66017942 - AluJb SINE Alu -5 307 1 1260 162 0 14 chr10 79571385 79571595 -66017693 + AluJb SINE Alu 2 208 -104 2084 119 10 0 chr10 79571610 79571903 -66017385 - AluSp SINE Alu -17 296 1 2239 85 0 3 chr10 79572003 79572312 -66016976 - AluSx SINE Alu 0 309 2 575 133 6 218 chr10 79572353 79572430 -66016858 - MER94 DNA DNA -1 133 108 1534 151 26 74 chr10 79572430 79572597 -66016691 - AluJo SINE Alu -16 296 149 387 0 0 0 chr10 79572597 79572640 -66016648 + (TG)n Simple_repeat Simple_repeat 2 44 0 1534 151 26 74 chr10 79572640 79572783 -66016505 - AluJo SINE Alu -163 149 1 575 133 6 218 chr10 79572783 79572870 -66016418 - MER94 DNA DNA -26 108 4 346 302 8 23 chr10 79573072 79573201 -66016087 + MIR SINE MIR 74 200 -62 374 259 155 31 chr10 79573337 79573530 -66015758 - L2 LINE L2 -1538 1776 1560 326 280 23 40 chr10 79573654 79573829 -66015459 + (GGGTG)n Simple_repeat Simple_repeat 3 174 0 492 211 0 0 chr10 79573842 79573989 -66015299 + G-rich Low_complexity Low_complexity 1 147 0 1555 52 0 5 chr10 79574007 79574235 -66015053 + AluY SINE Alu 119 345 0 2107 115 3 3 chr10 79575368 79575687 -66013601 + AluSq SINE Alu 1 319 0 1464 187 68 11 chr10 79576342 79576620 -66012668 + AluJo SINE Alu 1 294 -18 2430 86 3 3 chr10 79576623 79576936 -66012352 + AluSp SINE Alu 1 313 0 1913 130 22 4 chr10 79576948 79577253 -66012035 + AluSx SINE Alu 1 310 0 231 125 0 0 chr10 79577274 79577306 -66011982 + Alu SINE Alu 1 32 -276 1488 116 0 62 chr10 79577306 79577370 -66011918 + AluSg/x SINE Alu 82 148 -164 2111 94 4 0 chr10 79577370 79577675 -66011613 + AluSg1 SINE Alu 1 306 0 1488 116 0 62 chr10 79577675 79577850 -66011438 + AluSg/x SINE Alu 148 307 -5 220 254 85 0 chr10 79582796 79582855 -66006433 + MIR SINE MIR 78 141 -67 22 0 0 0 chr10 79583383 79583405 -66005883 + AT_rich Low_complexity Low_complexity 1 22 0 244 218 0 36 chr10 79587277 79587299 -66001989 + AluJb SINE Alu 118 137 -165 295 105 0 0 chr10 79587299 79587337 -66001951 + Alu SINE Alu 3 40 -262 1830 92 0 32 chr10 79587338 79587588 -66001700 - AluSq SINE Alu -71 242 1 205 281 78 0 chr10 79587728 79587792 -66001496 + MIR SINE MIR 184 252 -10 2324 104 0 0 chr10 79588295 79588603 -66000685 + AluSc SINE Alu 1 308 -1 25 90 0 0 chr10 79589022 79589089 -66000199 + AT_rich Low_complexity Low_complexity 1 67 0 23 68 0 0 chr10 79589299 79589343 -65999945 + AT_rich Low_complexity Low_complexity 1 44 0 329 167 0 0 chr10 79591030 79591078 -65998210 + Alu SINE Alu 1 48 -260 194 79 0 53 chr10 79591519 79591557 -65997731 + (TAAAAA)n Simple_repeat Simple_repeat 3 38 0 35040 39 2 2 chr10 79591838 79596029 -65993259 - L1P LINE L1 -1950 4196 3 2048 157 0 0 chr10 79596161 79596467 -65992821 - AluSx SINE Alu -6 306 1 35 0 0 0 chr10 79596539 79596574 -65992714 + AT_rich Low_complexity Low_complexity 1 35 0 291 161 0 115 chr10 79596644 79596731 -65992557 + Charlie2 DNA MER1_type 2432 2508 -354 527 237 91 16 chr10 79596768 79596954 -65992334 + Charlie2 DNA MER1_type 2489 2688 -174 2265 62 45 14 chr10 79596954 79597244 -65992044 + AluY SINE Alu 1 299 -12 1925 106 0 53 chr10 79597285 79597569 -65991719 + AluSx SINE Alu 1 269 -43 266 373 9 9 chr10 79597884 79597994 -65991294 + MIR3 SINE MIR 6 115 -93 1244 160 96 53 chr10 79599514 79599795 -65989493 + AluJb SINE Alu 1 293 -19 367 321 175 27 chr10 79599799 79600245 -65989043 + L2 LINE L2 2247 2758 -556 224 139 360 35 chr10 79600324 79600410 -65988878 - MIR SINE MIR -70 192 79 264 401 54 18 chr10 79600427 79600594 -65988694 + L2 LINE L2 3090 3262 -10 802 223 78 5 chr10 79601098 79601291 -65987997 - MER3 DNA MER1_type 0 209 3 2232 116 7 0 chr10 79601722 79602016 -65987272 + AluSx SINE Alu 1 296 -16 21 36 0 0 chr10 79602161 79602189 -65987099 + AT_rich Low_complexity Low_complexity 1 28 0 747 166 221 14 chr10 79602252 79602397 -65986891 - FAM SINE Alu 0 175 1 2374 87 6 3 chr10 79602549 79602860 -65986428 - AluSx SINE Alu 0 312 1 540 116 32 84 chr10 79603195 79603290 -65985998 + FRAM SINE Alu 71 160 -16 302 146 18 18 chr10 79603390 79603445 -65985843 - MLT1A1 LTR MaLR 0 396 342 1154 181 25 128 chr10 79603496 79603855 -65985433 - MLT1A1 LTR MaLR -43 322 1 2350 107 0 0 chr10 79603872 79604181 -65985107 + AluSx SINE Alu 2 310 -2 7359 173 143 26 chr10 79604501 79606072 -65983216 + MER52A LTR ERV1 1 1755 0 2721 155 22 7 chr10 79606282 79606734 -65982554 + MER65C LTR ERV1 1 459 -2 339 193 148 0 chr10 79606915 79607003 -65982285 - L1MA10 LINE L1 -9 6325 6225 368 207 28 123 chr10 79607085 79607208 -65982080 - L1M4 LINE L1 -2191 3955 3853 2228 128 0 0 chr10 79607208 79607514 -65981774 - AluSx SINE Alu -6 306 1 368 207 28 123 chr10 79607514 79607569 -65981719 - L1M4 LINE L1 -2293 3853 3794 201 158 0 0 chr10 79607798 79607836 -65981452 + (GTTTG)n Simple_repeat Simple_repeat 2 39 0 2180 120 16 7 chr10 79607838 79608146 -65981142 - AluSx SINE Alu -1 311 1 602 165 110 12 chr10 79608489 79608653 -65980635 + L1M4 LINE L1 4319 4498 -1648 657 118 0 0 chr10 79608801 79608894 -65980394 + AluSg/x SINE Alu 205 297 -12 444 128 85 0 chr10 79609045 79609139 -65980149 - L1MA7 LINE L1 -10 6281 6180 359 143 148 11 chr10 79609140 79609253 -65980035 - MER106B DNA MER1_type -84 975 29 199 336 127 60 chr10 79609260 79609310 -65979978 - L2 LINE L2 -1393 1921 1876 2315 79 7 3 chr10 79609310 79609601 -65979687 + AluSg SINE Alu 1 292 -18 199 336 127 60 chr10 79609601 79609982 -65979306 - L2 LINE L2 -1438 1876 1461 1828 151 0 40 chr10 79610145 79610444 -65978844 - AluJo SINE Alu -21 291 5 2315 97 0 7 chr10 79610465 79610764 -65978524 - AluSc SINE Alu -12 297 1 2439 93 0 0 chr10 79610869 79611179 -65978109 - AluSg SINE Alu 0 310 1 214 281 42 42 chr10 79611523 79611619 -65977669 + L2 LINE L2 1898 1993 -1321 24 0 0 0 chr10 79614208 79614232 -65975056 + AT_rich Low_complexity Low_complexity 1 24 0 1024 179 113 10 chr10 79614819 79615014 -65974274 + MER20 DNA MER1_type 2 216 -3 392 288 36 0 chr10 79615165 79615276 -65974012 - MIR SINE MIR -20 242 128 2132 122 0 0 chr10 79615873 79616160 -65973128 - AluSx SINE Alu -25 287 1 1168 159 5 29 chr10 79616793 79617000 -65972288 + AluJo SINE Alu 1 202 -110 324 170 0 10 chr10 79617000 79617071 -65972217 - Alu SINE Alu -261 47 1 2282 81 7 16 chr10 79617112 79617422 -65971866 - AluY SINE Alu -3 308 2 231 100 100 0 chr10 79617422 79617462 -65971826 - L3 LINE CR1 -565 1012 969 346 158 26 2 chr10 79617939 79618176 -65971112 + AluJo SINE Alu 12 299 -3 642 242 78 9 chr10 79618246 79618431 -65970857 + MIR SINE MIR 1 182 -63 462 261 143 48 chr10 79618850 79619188 -65970100 + L1MEd LINE L1 709 1108 -5011 1942 107 14 48 chr10 79619188 79619478 -65969810 + AluSp SINE Alu 1 280 -33 462 261 143 48 chr10 79619478 79619621 -65969667 + L1MEd LINE L1 1108 1236 -4883 955 253 90 13 chr10 79619972 79620284 -65969004 + MER46C DNA MER2_type 2 337 -1 2299 102 0 0 chr10 79621189 79621484 -65967804 - AluSx SINE Alu -17 295 1 2759 166 22 4 chr10 79621716 79622168 -65967120 + MER66B LTR ERV1 27 486 0 339 25 0 0 chr10 79622282 79622322 -65966966 + (TG)n Simple_repeat Simple_repeat 2 41 0 2048 123 0 27 chr10 79622800 79623100 -65966188 - AluY SINE Alu -19 292 1 24 0 0 0 chr10 79623100 79623124 -65966164 + AT_rich Low_complexity Low_complexity 1 24 0 824 116 7 103 chr10 79623124 79623270 -65966018 - FLAM_C SINE Alu 0 133 2 1670 155 40 43 chr10 79623292 79623595 -65965693 - AluJb SINE Alu -10 302 1 2272 94 7 0 chr10 79623612 79623910 -65965378 - AluSq SINE Alu -13 300 1 378 0 0 0 chr10 79624113 79624155 -65965133 + (TG)n Simple_repeat Simple_repeat 1 42 0 1876 129 24 17 chr10 79624155 79624434 -65964854 - AluSx SINE Alu -28 284 1 2297 91 7 0 chr10 79624559 79624857 -65964431 - AluY SINE Alu -11 300 1 2290 105 0 0 chr10 79625845 79626140 -65963148 + AluSx SINE Alu 1 295 -17 296 314 32 76 chr10 79626839 79627024 -65962264 - MIR3 SINE MIR -14 194 18 32 0 0 0 chr10 79627058 79627090 -65962198 + AT_rich Low_complexity Low_complexity 1 32 0 1860 132 44 10 chr10 79627535 79627831 -65961457 - AluSx SINE Alu -6 306 1 1299 203 4 0 chr10 79627924 79628166 -65961122 - AluJb SINE Alu -24 288 46 1094 107 0 0 chr10 79628166 79628306 -65960982 + AluSg/x SINE Alu 171 310 -2 430 149 97 35 chr10 79628634 79628748 -65960540 - MER112 DNA MER1_type -101 159 39 944 127 0 0 chr10 79628780 79628898 -65960390 - FLAM_C SINE Alu -15 118 1 1345 278 115 16 chr10 79628929 79629364 -65959924 - MLT1H1 LTR MaLR -30 525 48 403 317 97 5 chr10 79629643 79629829 -65959459 + L2 LINE L2 3111 3313 0 1792 65 4 43 chr10 79629849 79630125 -65959163 + AluY SINE Alu 1 265 -46 21 36 0 0 chr10 79631674 79631702 -65957586 + AT_rich Low_complexity Low_complexity 1 28 0 2139 122 0 10 chr10 79633033 79633358 -65955930 + AluSx SINE Alu 3 312 0 1886 172 62 3 chr10 79633650 79633975 -65955313 + MER2 DNA MER2_type 1 344 0 1986 199 70 51 chr10 79634501 79634722 -65954566 + L1ME3A LINE L1 3760 3975 -2171 1989 148 0 13 chr10 79634722 79635033 -65954255 + AluJo SINE Alu 1 307 -5 1986 199 70 51 chr10 79635033 79635383 -65953905 + L1ME3A LINE L1 3975 4342 -1804 1187 158 109 115 chr10 79635405 79635709 -65953579 + AluJo SINE Alu 1 302 0 2230 71 30 27 chr10 79635709 79636006 -65953282 + AluSc SINE Alu 1 298 -11 380 186 47 0 chr10 79636017 79636103 -65953185 + L1ME3A LINE L1 4616 4705 -1441 22 35 0 0 chr10 79636660 79636689 -65952599 + AT_rich Low_complexity Low_complexity 1 29 0 2271 191 119 16 chr10 79636689 79637239 -65952049 + L1ME3A LINE L1 4693 5314 -832 1651 164 80 3 chr10 79637239 79637525 -65951763 + AluJo SINE Alu 1 308 -4 2271 191 119 16 chr10 79637525 79637585 -65951703 + L1ME3A LINE L1 5314 5366 -780 1000 218 101 54 chr10 79637581 79637775 -65951513 + L1ME3A LINE L1 5834 6050 -120 * 2210 113 0 31 chr10 79637775 79638094 -65951194 - AluSg SINE Alu -1 309 1 1000 218 101 54 chr10 79638094 79638216 -65951072 + L1ME3A LINE L1 6050 6165 -5 1421 101 0 0 chr10 79639142 79639321 -65949967 + AluSx SINE Alu 1 179 -133 1407 119 111 8 chr10 79639331 79639566 -65949722 - AluSx SINE Alu -19 293 35 683 290 113 9 chr10 79639633 79639854 -65949434 - MIR SINE MIR 0 262 19 1010 148 31 99 chr10 79639895 79640043 -65949245 + MER3 DNA MER1_type 1 157 -52 2425 65 0 0 chr10 79640043 79640333 -65948955 - AluY SINE Alu -21 290 1 1715 175 13 26 chr10 79640333 79640641 -65948647 - AluJb SINE Alu -7 305 1 1010 148 31 99 chr10 79640641 79640714 -65948574 + MER3 DNA MER1_type 155 208 -1 2390 84 0 3 chr10 79640738 79641034 -65948254 - AluSg SINE Alu -15 295 1 22 0 0 0 chr10 79641646 79641668 -65947620 + AT_rich Low_complexity Low_complexity 1 22 0 205 363 65 8 chr10 79642032 79642156 -65947132 - L2 LINE L2 -4 3309 3179 250 332 118 46 chr10 79642286 79642659 -65946629 - L2 LINE L2 -450 2864 2465 2347 96 0 0 chr10 79643075 79643367 -65945921 + AluSc SINE Alu 1 292 -17 451 330 81 71 chr10 79643472 79643551 -65945737 - MLT1K LTR MaLR -16 572 495 742 83 28 0 chr10 79643551 79643659 -65945629 + L1PA13 LINE L1 6053 6163 0 451 330 81 71 chr10 79643659 79643988 -65945300 - MLT1K LTR MaLR -93 495 160 207 269 30 15 chr10 79644163 79644230 -65945058 - MIR SINE MIR -83 125 58 2196 120 7 3 chr10 79644232 79644541 -65944747 + AluSx SINE Alu 1 310 -2 257 171 219 73 chr10 79644744 79644867 -65944421 + L1ME1 LINE L1 5989 6129 -37 23 0 0 0 chr10 79645624 79645647 -65943641 + AT_rich Low_complexity Low_complexity 1 23 0 4158 136 21 58 chr10 79646020 79646489 -65942799 - L1PA16 LINE L1 -27 6139 5654 2204 115 0 3 chr10 79646489 79646793 -65942495 - AluSc SINE Alu -6 303 1 4158 136 21 58 chr10 79646793 79647017 -65942271 - L1PA16 LINE L1 -512 5654 5474 2367 99 0 0 chr10 79647017 79647319 -65941969 + AluSq SINE Alu 1 302 -11 4158 136 21 58 chr10 79647319 79647387 -65941901 - L1PA16 LINE L1 -692 5474 5405 236 264 0 0 chr10 79647981 79648034 -65941254 + 5S rRNA rRNA 2 54 -67 1412 126 94 105 chr10 79648197 79648460 -65940828 + MER44D DNA MER2_type 1 266 -2225 522 99 0 0 chr10 79648460 79648551 -65940737 + (TCTA)n Simple_repeat Simple_repeat 4 94 0 1412 126 94 105 chr10 79648551 79648629 -65940659 + MER44D DNA MER2_type 266 608 -1 4708 167 40 44 chr10 79648735 79650169 -65939119 - L1MB7 LINE L1 -19 6165 4726 1666 174 6 56 chr10 79650169 79650490 -65938798 - AluJo SINE Alu -7 305 1 4708 167 40 44 chr10 79650490 79650573 -65938715 - L1MB7 LINE L1 -1458 4726 4644 198 0 0 0 chr10 79650573 79650595 -65938693 + (TTA)n Simple_repeat Simple_repeat 1 22 0 4708 167 40 44 chr10 79650595 79650767 -65938521 - L1MB7 LINE L1 -1540 4644 4492 1248 141 25 76 chr10 79650767 79651043 -65938245 - AluSg SINE Alu -7 303 42 10575 24 1 0 chr10 79651198 79653153 -65936135 + L1PA3 LINE L1 4183 6152 -3 2663 126 67 17 chr10 79653174 79653580 -65935708 - MSTC LTR MaLR -2 426 1 300 250 22 110 chr10 79653655 79653791 -65935497 - Charlie2 DNA MER1_type -2632 150 27 285 329 13 0 chr10 79653838 79653914 -65935374 - MIR SINE MIR -61 147 71 1905 122 41 0 chr10 79653938 79654243 -65935045 + AluSx SINE Alu 1 316 0 1979 134 23 7 chr10 79655212 79655511 -65933777 - AluSx SINE Alu -8 304 1 183 100 0 0 chr10 79656587 79656617 -65932671 + (TG)n Simple_repeat Simple_repeat 1 30 0 1613 170 18 4 chr10 79657088 79657364 -65931924 + AluJo SINE Alu 1 280 -32 2191 8 0 8 chr10 79657422 79657663 -65931625 - AluYb8 SINE Alu -6 312 74 2198 99 7 10 chr10 79657742 79658044 -65931244 - AluSq SINE Alu -12 301 1 21 0 0 0 chr10 79658114 79658135 -65931153 + AT_rich Low_complexity Low_complexity 1 21 0 245 283 0 17 chr10 79658351 79658411 -65930877 - L2 LINE L2 -1 3271 3213 2278 104 0 3 chr10 79658749 79659047 -65930241 - AluSx SINE Alu -15 297 1 199 186 134 82 chr10 79659048 79659145 -65930143 + MIR SINE MIR 107 208 -54 420 282 17 0 chr10 79659195 79659312 -65929976 + MIR SINE MIR 67 185 -77 1965 124 50 0 chr10 79661452 79661734 -65927554 - AluSx SINE Alu -16 296 1 289 105 0 0 chr10 79661747 79661785 -65927503 - Alu SINE Alu -270 38 1 2198 86 3 14 chr10 79661792 79662082 -65927206 - AluSq SINE Alu -8 305 19 439 260 71 16 chr10 79664141 79664268 -65925020 - MIR3 SINE MIR -34 174 41 2407 100 0 0 chr10 79664348 79664658 -65924630 - AluSx SINE Alu -2 310 1 221 143 61 0 chr10 79669801 79669850 -65919438 + CT-rich Low_complexity Low_complexity 1 52 0 381 43 0 0 chr10 79670284 79670331 -65918957 + (TG)n Simple_repeat Simple_repeat 2 48 0 197 206 350 0 chr10 79670552 79670649 -65918639 - L2 LINE L2 -18 3295 3165 986 149 0 157 chr10 79670963 79671225 -65918063 + AluJo SINE Alu 1 221 -91 417 39 0 0 chr10 79671256 79671307 -65917981 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 309 228 101 0 chr10 79671339 79671418 -65917870 - MIR SINE MIR -64 144 58 965 110 0 15 chr10 79672451 79672620 -65916668 + AluSp/q SINE Alu 170 313 0 545 242 240 53 chr10 79673038 79673249 -65916039 - L2 LINE L2 -4 3309 3139 1672 162 10 24 chr10 79673249 79673545 -65915743 + AluJb SINE Alu 1 292 -20 545 242 240 53 chr10 79673545 79673692 -65915596 - L2 LINE L2 -174 3139 2884 180 0 0 0 chr10 79675895 79675915 -65913373 + (A)n Simple_repeat Simple_repeat 1 20 0 2303 89 0 0 chr10 79676420 79676701 -65912587 - AluSx SINE Alu -31 281 1 483 278 79 75 chr10 79680597 79680838 -65908450 - MIR SINE MIR -6 256 15 2371 93 7 0 chr10 79680860 79681161 -65908127 - AluSp SINE Alu -10 303 1 314 250 16 0 chr10 79682371 79682435 -65906853 - MER2 DNA MER2_type -1 344 280 951 67 8 67 chr10 79682448 79682582 -65906706 + AluSq/x SINE Alu 1 126 -186 2248 95 54 0 chr10 79682589 79682883 -65906405 + AluSg SINE Alu 1 310 0 946 171 125 0 chr10 79682923 79683099 -65906189 - MER2 DNA MER2_type -138 207 10 2120 97 0 50 chr10 79683244 79683586 -65905702 + AluSq SINE Alu 1 327 0 2030 101 18 0 chr10 79683701 79683978 -65905310 + AluSp SINE Alu 1 282 -31 2188 115 6 16 chr10 79734209 79734523 -65854765 - AluSp SINE Alu -2 311 1 512 268 113 19 chr10 79734560 79734825 -65854463 - MER20B DNA MER1_type -4 779 490 372 248 163 45 chr10 79735533 79735735 -65853553 + MIR SINE MIR 25 250 -12 305 268 85 46 chr10 79735756 79735909 -65853379 - MIR SINE MIR -57 205 47 192 300 33 0 chr10 79736228 79736288 -65853000 + MIR SINE MIR 90 151 -111 321 294 48 24 chr10 79736870 79736996 -65852292 + MIR SINE MIR 20 148 -114 21 0 0 0 chr10 79737872 79737893 -65851395 + AT_rich Low_complexity Low_complexity 1 21 0 191 161 0 0 chr10 79738178 79738209 -65851079 + MIR SINE MIR 220 250 -12 2385 77 0 7 chr10 79738559 79738857 -65850431 - AluSq SINE Alu -17 296 1 234 0 0 0 chr10 79738928 79738954 -65850334 + (A)n Simple_repeat Simple_repeat 1 26 0 1515 209 0 10 chr10 79739735 79740032 -65849256 - AluJb SINE Alu -18 294 1 670 192 15 0 chr10 79740209 79740339 -65848949 + Cheshire DNA MER1_type 1047 1178 -1242 2054 121 0 23 chr10 79740339 79740645 -65848643 + AluSx SINE Alu 1 299 -13 202 143 24 0 chr10 79740645 79740687 -65848601 + (TA)n Simple_repeat Simple_repeat 2 44 0 3902 171 53 103 chr10 79740753 79741181 -65848107 + Cheshire DNA MER1_type 1168 1616 -804 818 173 0 0 chr10 79741181 79741308 -65847980 - FLAM_C SINE Alu -2 131 5 3902 171 53 103 chr10 79741308 79741356 -65847932 + Cheshire DNA MER1_type 1616 1665 -755 901 112 0 13 chr10 79741356 79741508 -65847780 + (TTCC)n Simple_repeat Simple_repeat 3 152 0 1732 169 3 10 chr10 79741513 79741803 -65847485 - AluSx SINE Alu -17 295 8 3902 171 53 103 chr10 79741803 79742364 -65846924 + Cheshire DNA MER1_type 1669 2152 -268 2320 99 0 3 chr10 79742364 79742666 -65846622 + AluSg SINE Alu 1 301 -9 3902 171 53 103 chr10 79742666 79742760 -65846528 + Cheshire DNA MER1_type 2152 2249 -171 389 333 0 0 chr10 79743052 79743223 -65846065 + C-rich Low_complexity Low_complexity 1 171 0 807 162 157 9 chr10 79743503 79743719 -65845569 - Cheshire DNA MER1_type -1293 1127 880 1054 169 104 130 chr10 79743721 79744029 -65845259 - AluJo SINE Alu -2 300 1 768 172 0 0 chr10 79744046 79744174 -65845114 - FLAM_C SINE Alu -7 136 9 3105 223 66 36 chr10 79744180 79745049 -65844239 - Cheshire DNA MER1_type -1524 896 2 413 304 212 14 chr10 79745591 79745739 -65843549 - L1ME LINE L1 -303 5818 5701 2318 84 0 10 chr10 79745739 79746050 -65843238 + AluY SINE Alu 1 308 -3 413 304 212 14 chr10 79746050 79746269 -65843019 - L1ME LINE L1 -420 5701 5359 459 295 148 14 chr10 79746536 79746949 -65842339 + L1M4 LINE L1 3081 3548 -2598 1137 165 110 8 chr10 79747078 79747315 -65841973 - MER76 LTR ERV -427 261 1 1434 247 55 18 chr10 79747374 79747754 -65841534 - LTR40c LTR ERVL -12 453 60 667 247 46 5 chr10 79747788 79747982 -65841306 + L1ME1 LINE L1 5957 6158 -8 1758 179 0 16 chr10 79749835 79750143 -65839145 + AluSx SINE Alu 3 305 -7 2185 114 3 7 chr10 79750205 79750513 -65838775 + AluSq SINE Alu 1 307 -6 1224 263 68 39 chr10 79751062 79751553 -65837735 - MLT1F LTR MaLR -30 512 9 1005 198 0 0 chr10 79751558 79751725 -65837563 - FAM SINE Alu -8 167 1 28 0 0 0 chr10 79751789 79751817 -65837471 + AT_rich Low_complexity Low_complexity 1 28 0 1791 175 0 20 chr10 79751819 79752111 -65837177 - AluJb SINE Alu -26 286 1 541 129 0 105 chr10 79752866 79752902 -65836386 - L1PA8 LINE L1 0 6172 6134 235 47 0 47 chr10 79752902 79752945 -65836343 + (TTTTA)n Simple_repeat Simple_repeat 1 41 0 541 129 0 105 chr10 79752945 79753032 -65836256 - L1PA8 LINE L1 -38 6134 6062 238 264 129 36 chr10 79753103 79753132 -65836156 + L1MA6 LINE L1 1384 1409 -5156 2184 133 16 34 chr10 79753132 79753514 -65835774 - THE1C LTR MaLR 0 375 1 238 264 129 36 chr10 79753514 79753624 -65835664 + L1MA6 LINE L1 1409 1536 -5029 309 258 63 79 chr10 79753635 79753782 -65835506 + L1MA6 LINE L1 3102 3245 -4320 2124 127 0 0 chr10 79753782 79754073 -65835215 + AluSx SINE Alu 1 291 -21 309 258 63 79 chr10 79754073 79754177 -65835111 + L1MA6 LINE L1 3245 3349 -4216 252 26 26 0 chr10 79754232 79754271 -65835017 - L1PA15 LINE L1 -4 6161 6122 481 206 206 0 chr10 79754512 79754701 -65834587 + MER2 DNA MER2_type 118 345 0 183 291 139 25 chr10 79754702 79754781 -65834507 - MIR SINE MIR -162 100 13 207 194 0 0 chr10 79754887 79754923 -65834365 + CT-rich Low_complexity Low_complexity 3 38 0 827 210 73 59 chr10 79755051 79755154 -65834134 - L1MDa LINE L1 -4853 1687 1587 1724 187 6 22 chr10 79755154 79755469 -65833819 - AluJo SINE Alu 0 312 3 827 210 73 59 chr10 79755469 79755788 -65833500 - L1MDa LINE L1 -4953 1587 1259 202 189 0 0 chr10 79758299 79758336 -65830952 + CT-rich Low_complexity Low_complexity 1 37 0 22 56 0 0 chr10 79759456 79759492 -65829796 + AT_rich Low_complexity Low_complexity 1 36 0 256 206 140 37 chr10 79760550 79760657 -65828631 - L1ME4a LINE L1 -110 6011 5894 351 250 56 83 chr10 79761223 79761332 -65827956 + L1M4 LINE L1 4508 4610 -1536 2246 93 0 0 chr10 79761332 79761621 -65827667 + AluSc SINE Alu 1 289 -20 351 250 56 83 chr10 79761621 79761727 -65827561 + L1M4 LINE L1 4610 4717 -1429 191 167 24 0 chr10 79761743 79761785 -65827503 + (TATATG)n Simple_repeat Simple_repeat 2 44 0 1778 150 6 41 chr10 79762071 79762391 -65826897 + AluJb SINE Alu 1 309 -3 262 274 72 49 chr10 79762865 79763088 -65826200 - HAL1 LINE L1 -898 1609 1382 332 322 45 50 chr10 79763150 79763352 -65825936 - L1MEd LINE L1 -4929 1190 990 9390 181 48 21 chr10 79763829 79764804 -65824484 + L1MA6 LINE L1 3953 4900 -2665 1583 148 22 71 chr10 79764804 79765115 -65824173 - AluJo SINE Alu -12 300 5 9390 181 48 21 chr10 79765115 79765341 -65823947 + L1MA6 LINE L1 4900 5118 -2447 1458 139 109 0 chr10 79765341 79765579 -65823709 + AluSx SINE Alu 36 299 -13 9390 181 48 21 chr10 79765579 79766552 -65822736 + L1MA6 LINE L1 5118 6186 -1379 2608 179 43 17 chr10 79766554 79767091 -65822197 + L1MA6 LINE L1 6937 7487 -232 1642 189 0 23 chr10 79767106 79767407 -65821881 + AluJo SINE Alu 1 294 -18 852 157 31 167 chr10 79767411 79767566 -65821722 + L1MB8 LINE L1 5931 6031 -147 2484 74 0 0 chr10 79767566 79767876 -65821412 + AluY SINE Alu 1 310 -1 852 157 31 167 chr10 79767876 79768007 -65821281 + L1MB8 LINE L1 6031 6178 0 340 158 158 0 chr10 79768104 79768205 -65821083 - Charlie2a DNA MER1_type -1277 1585 1469 244 302 146 0 chr10 79768355 79768451 -65820837 - Charlie2a DNA MER1_type -2468 314 205 287 229 12 42 chr10 79768585 79768751 -65820537 + GA-rich Low_complexity Low_complexity 3 163 0 1644 145 0 8 chr10 79769907 79770156 -65819132 + AluJb SINE Alu 56 302 -10 24 0 0 0 chr10 79770290 79770314 -65818974 + AT_rich Low_complexity Low_complexity 1 24 0 2875 226 122 24 chr10 79770811 79771746 -65817542 + L1M4c LINE L1 1244 2270 -4114 1684 161 46 54 chr10 79771830 79772202 -65817086 + MLT1B LTR MaLR 20 388 -2 1370 216 14 21 chr10 79772974 79773265 -65816023 + AluJo SINE Alu 1 289 -23 2277 86 0 0 chr10 79773356 79773660 -65815628 + AluSc SINE Alu 1 304 0 909 162 0 0 chr10 79773851 79773987 -65815301 - FLAM_C SINE Alu -2 141 6 2142 156 11 21 chr10 79774711 79775089 -65814199 - THE1C LTR MaLR -1 374 1 2222 117 0 7 chr10 79775172 79775480 -65813808 - AluSx SINE Alu -6 306 1 237 250 0 0 chr10 79776076 79776184 -65813104 + (TA)n Simple_repeat Simple_repeat 1 108 0 240 221 26 0 chr10 79776461 79776538 -65812750 + L1ME LINE L1 5354 5432 -689 21 0 0 0 chr10 79777230 79777251 -65812037 + AT_rich Low_complexity Low_complexity 1 21 0 643 251 88 8 chr10 79777309 79777560 -65811728 - L1MD2 LINE L1 -438 5921 5651 1904 202 67 53 chr10 79777564 79778384 -65810904 - L1MD2 LINE L1 -582 5584 4748 1955 158 20 26 chr10 79778613 79778955 -65810333 + MER2 DNA MER2_type 1 340 -5 641 308 137 19 chr10 79779055 79779419 -65809869 - LTR16C LTR ERVL -13 478 72 1453 180 3 48 chr10 79779718 79780034 -65809254 - AluSq SINE Alu -11 302 1 210 37 0 0 chr10 79780073 79780100 -65809188 + (CAA)n Simple_repeat Simple_repeat 2 28 0 2636 250 56 11 chr10 79780115 79780870 -65808418 + L1MD2 LINE L1 5358 6146 -213 1699 154 3 33 chr10 79780919 79781218 -65808070 - AluJo SINE Alu -22 290 1 2186 80 7 30 chr10 79783202 79783504 -65805784 + AluSq SINE Alu 7 301 -12 248 213 40 13 chr10 79783996 79784071 -65805217 - L1MB7 LINE L1 -116 6068 5992 3834 214 28 32 chr10 79784071 79784430 -65804858 - L1MD2 LINE L1 -1464 4682 4323 1816 172 0 7 chr10 79784430 79784733 -65804555 - AluJo SINE Alu -11 301 1 333 0 0 0 chr10 79784738 79784775 -65804513 + (TG)n Simple_repeat Simple_repeat 2 38 0 3834 214 28 32 chr10 79784775 79785154 -65804134 - L1MD2 LINE L1 -1827 4319 3940 1789 179 123 10 chr10 79785154 79785544 -65803744 - Tigger2a DNA MER2_type 0 434 1 3834 214 28 32 chr10 79785544 79785564 -65803724 - L1MD2 LINE L1 -2206 3940 3921 2158 119 3 0 chr10 79785564 79785866 -65803422 - AluSq SINE Alu -10 303 1 3834 214 28 32 chr10 79785866 79786227 -65803061 - L1MD2 LINE L1 -2225 3921 3559 226 306 92 20 chr10 79786783 79786881 -65802407 - L3 LINE CR1 -47 1530 1426 639 265 15 15 chr10 79786990 79787194 -65802094 - L1MD2 LINE L1 -2573 3573 3370 365 218 14 82 chr10 79787188 79787265 -65802023 - L1MD2 LINE L1 -3778 2368 2304 * 1590 189 10 27 chr10 79787265 79787566 -65801722 - AluJo SINE Alu -16 296 1 365 218 14 82 chr10 79787566 79787635 -65801653 - L1MD2 LINE L1 -3842 2304 2232 1842 157 11 0 chr10 79787842 79788150 -65801138 - AluSx SINE Alu 0 311 1 2384 60 13 10 chr10 79788795 79789095 -65800193 + AluY SINE Alu 11 311 0 29023 126 18 60 chr10 79789099 79795545 -65793743 + L1PA8 LINE L1 13 6171 -1 2380 88 0 0 chr10 79795545 79795839 -65793449 + AluY SINE Alu 1 294 -17 197 283 292 9 chr10 79796655 79796768 -65792520 + MIR3 SINE MIR 52 196 -12 311 246 0 0 chr10 79797057 79797114 -65792174 - AluJ/FLAM SINE Alu -242 60 4 183 80 0 0 chr10 79797941 79797966 -65791322 + (TG)n Simple_repeat Simple_repeat 2 26 0 2905 6 0 0 chr10 79797993 79798308 -65790980 - AluYb8 SINE Alu -3 315 1 490 283 76 30 chr10 79798977 79799214 -65790074 + LTR40b LTR ERVL 137 384 -78 1197 179 79 61 chr10 79799314 79799593 -65789695 - AluJo SINE Alu -18 284 1 559 181 9 26 chr10 79800936 79801052 -65788236 - FRAM SINE Alu -23 153 40 2569 136 200 46 chr10 79801052 79801419 -65787869 - L1 LINE L1 -1112 5216 4907 1601 169 20 40 chr10 79801419 79801720 -65787568 + AluJo SINE Alu 1 295 -17 2569 136 200 46 chr10 79801720 79802022 -65787266 - L1 LINE L1 -1421 4907 4444 678 215 0 0 chr10 79802056 79802186 -65787102 - L1 LINE L1 -3417 2911 2782 4477 231 59 47 chr10 79802301 79802910 -65786378 - L1 LINE L1 -3417 2911 2311 2232 87 7 0 chr10 79802910 79803196 -65786092 - AluSg SINE Alu -22 288 1 4477 231 59 47 chr10 79803196 79804895 -65784393 - L1 LINE L1 -4017 2311 558 277 320 68 0 chr10 79805744 79805847 -65783441 - L1 LINE L1 -5501 748 639 325 347 45 18 chr10 79806421 79806643 -65782645 + L2 LINE L2 1893 2120 -1194 486 0 0 0 chr10 79806680 79806734 -65782554 + (TG)n Simple_repeat Simple_repeat 2 55 0 185 370 49 44 chr10 79806856 79807059 -65782229 + L2 LINE L2 2549 2752 -562 2039 181 34 18 chr10 79807103 79807545 -65781743 - L1MB5 LINE L1 -2 6172 5724 677 176 0 0 chr10 79807564 79807689 -65781599 - L1MB5 LINE L1 -1888 4258 4134 * 1418 209 5 49 chr10 79807679 79808066 -65781222 - L1M3 LINE L1 -513 5667 5298 21 0 0 0 chr10 79808420 79808441 -65780847 + AT_rich Low_complexity Low_complexity 1 21 0 1983 166 0 0 chr10 79808643 79808939 -65780349 + AluJb SINE Alu 4 299 -13 2006 233 30 2 chr10 79809510 79809940 -65779348 - MER82 DNA MER2_type -6 647 206 21 36 0 0 chr10 79809960 79809988 -65779300 + AT_rich Low_complexity Low_complexity 1 28 0 430 237 7 43 chr10 79809994 79810133 -65779155 - MER82 DNA MER2_type -449 204 71 1367 209 51 0 chr10 79810148 79810401 -65778887 - AluJb SINE Alu -46 266 1 1959 141 10 7 chr10 79810624 79810921 -65778367 - AluSx SINE Alu -14 298 1 1479 196 4 8 chr10 79811070 79811335 -65777953 + AluJb SINE Alu 6 269 -43 254 214 36 0 chr10 79811461 79811517 -65777771 + L1MEc LINE L1 40 97 -6299 1953 242 29 8 chr10 79811524 79812115 -65777173 + L1M4 LINE L1 3881 4483 -1663 228 219 0 31 chr10 79812183 79812247 -65777041 + L1MA10 LINE L1 6237 6298 -36 43 56 0 0 chr10 79812675 79812746 -65776542 + AT_rich Low_complexity Low_complexity 1 71 0 740 139 35 9 chr10 79812749 79812864 -65776424 - FLAM_C SINE Alu -13 120 3 678 213 19 25 chr10 79813167 79813327 -65775961 + L1MB8 LINE L1 5978 6136 -42 441 228 0 32 chr10 79813323 79813446 -65775842 + L1MB8 LINE L1 4160 4278 -1868 * 251 33 0 0 chr10 79813533 79813563 -65775725 - LTR6A LTR ERV1 -462 102 73 4035 209 55 16 chr10 79814487 79816307 -65772981 + L1MB8 LINE L1 4276 6178 0 606 216 184 18 chr10 79816312 79816530 -65772758 - Charlie1 DNA MER1_type -564 2197 1944 220 222 16 0 chr10 79817860 79817923 -65771365 + T-rich Low_complexity Low_complexity 2 65 0 323 255 184 55 chr10 79818394 79818943 -65770345 - L1MC5 LINE L1 -50 7911 7292 2044 255 63 60 chr10 79819199 79819910 -65769378 - MER72 LTR ERV1 0 722 10 385 226 38 75 chr10 79820008 79820114 -65769174 + MIR SINE MIR 88 189 -73 412 183 158 0 chr10 79820184 79820266 -65769022 + FRAM SINE Alu 63 157 -19 1150 263 101 61 chr10 79820674 79820812 -65768476 - L2 LINE L2 -275 3038 2907 811 153 8 8 chr10 79820812 79820943 -65768345 + FLAM_A SINE Alu 1 131 -2 1150 263 101 61 chr10 79820943 79821351 -65767937 - L2 LINE L2 -406 2907 2482 521 315 131 41 chr10 79821353 79821756 -65767532 + L2 LINE L2 2619 3086 -227 1606 172 7 4 chr10 79821756 79822029 -65767259 + AluJo SINE Alu 21 294 -18 521 315 131 41 chr10 79822029 79822261 -65767027 + L2 LINE L2 3086 3296 -17 2184 104 0 3 chr10 79822470 79822759 -65766529 + AluY SINE Alu 3 290 -21 24 96 0 0 chr10 79823131 79823204 -65766084 + AT_rich Low_complexity Low_complexity 1 73 0 1921 155 0 3 chr10 79824095 79824391 -65764897 - AluJb SINE Alu -17 295 1 212 197 0 30 chr10 79825076 79825142 -65764146 + (TAA)n Simple_repeat Simple_repeat 1 64 0 285 51 0 0 chr10 79825379 79825418 -65763870 + (TCTCTG)n Simple_repeat Simple_repeat 2 40 0 840 269 171 25 chr10 79825505 79825978 -65763310 - MER34 LTR ERV1 0 542 1 215 299 60 0 chr10 79826191 79826258 -65763030 - L2 LINE L2 -1 3312 3242 2168 120 0 3 chr10 79826380 79826681 -65762607 + AluSx SINE Alu 1 300 -12 681 177 145 11 chr10 79827009 79827195 -65762093 + L1MB7 LINE L1 5973 6183 -1 243 265 12 48 chr10 79827195 79827278 -65762010 - L2 LINE L2 -687 2627 2548 366 327 81 27 chr10 79827298 79827521 -65761767 - L2 LINE L2 -1011 2303 2069 240 304 0 25 chr10 79827521 79827600 -65761688 + L2 LINE L2 3237 3313 0 251 325 0 13 chr10 79827659 79827736 -65761552 - MIR SINE MIR -24 238 163 1382 209 91 30 chr10 79828797 79828934 -65760354 + MER119 DNA MER1_type 7 134 -449 2189 102 0 0 chr10 79828934 79829227 -65760061 - AluSg SINE Alu -17 293 1 1382 209 91 30 chr10 79829227 79829419 -65759869 + MER119 DNA MER1_type 134 356 -227 271 276 115 0 chr10 79829425 79829512 -65759776 + MER119 DNA MER1_type 462 558 -25 2152 113 13 7 chr10 79829889 79830199 -65759089 - AluSp SINE Alu -1 312 1 1537 226 32 2 chr10 79830326 79830769 -65758519 - L1M4 LINE L1 -1463 4683 4228 541 303 67 19 chr10 79830837 79831151 -65758137 - L1MEc LINE L1 -6031 365 37 316 269 96 26 chr10 79832399 79832555 -65756733 - L1MC4 LINE L1 0 8042 7876 374 298 198 16 chr10 79832567 79832940 -65756348 - L1MC4 LINE L1 -265 7777 7337 445 284 137 52 chr10 79832951 79833490 -65755798 - L1MC4a LINE L1 -1269 6539 5955 442 243 28 19 chr10 79833530 79833637 -65755651 + AluJo SINE Alu 113 220 -92 405 0 0 0 chr10 79833645 79833690 -65755598 + (CA)n Simple_repeat Simple_repeat 2 46 0 2611 194 47 10 chr10 79833693 79834735 -65754553 - L1MB2 LINE L1 -1 6170 5046 28 29 0 0 chr10 79834736 79834771 -65754517 + AT_rich Low_complexity Low_complexity 1 35 0 588 232 87 116 chr10 79834792 79835068 -65754220 - L1MC4a LINE L1 -1921 5887 5620 590 267 33 85 chr10 79835553 79835823 -65753465 - MIR SINE MIR -4 258 3 231 322 20 86 chr10 79836504 79836656 -65752632 - MIR3 SINE MIR -28 180 39 213 65 0 0 chr10 79836677 79836708 -65752580 + (GA)n Simple_repeat Simple_repeat 1 31 0 348 390 31 0 chr10 79836783 79836978 -65752310 - L3 LINE CR1 -80 1497 1297 269 299 20 15 chr10 79837166 79837286 -65752002 + CT-rich Low_complexity Low_complexity 1 120 0 2072 112 29 0 chr10 79837729 79838007 -65751281 + AluSx SINE Alu 1 286 -26 1746 174 3 16 chr10 79838244 79838554 -65750734 + AluJb SINE Alu 1 306 -6 1813 122 4 19 chr10 79838664 79838935 -65750353 + AluSq SINE Alu 1 267 -46 21 36 0 0 chr10 79839471 79839499 -65749789 + AT_rich Low_complexity Low_complexity 1 28 0 1674 303 53 26 chr10 79840886 79841693 -65747595 + L2 LINE L2 2459 3291 -22 589 266 0 0 chr10 79841793 79841921 -65747367 - FRAM SINE Alu -48 128 1 1504 198 0 41 chr10 79842044 79842358 -65746930 - AluJb SINE Alu -11 301 1 3466 137 4 6 chr10 79842950 79843474 -65745814 + MER1A DNA MER1_type 1 523 -4 24 77 0 0 chr10 79843498 79843550 -65745738 + AT_rich Low_complexity Low_complexity 1 52 0 2345 92 3 0 chr10 79846867 79847173 -65742115 - AluSc SINE Alu -2 307 1 234 128 21 0 chr10 79847466 79847513 -65741775 + Alu SINE Alu 254 301 -2 21 36 0 0 chr10 79847649 79847677 -65741611 + AT_rich Low_complexity Low_complexity 1 28 0 34 42 0 0 chr10 79847990 79848038 -65741250 + AT_rich Low_complexity Low_complexity 1 48 0 1606 198 0 7 chr10 79848065 79848376 -65740912 - AluJo SINE Alu 0 309 1 32 81 0 0 chr10 79848847 79848921 -65740367 + AT_rich Low_complexity Low_complexity 1 74 0 25 31 0 0 chr10 79849180 79849212 -65740076 + AT_rich Low_complexity Low_complexity 1 32 0 459 237 0 0 chr10 79851790 79851887 -65737401 + AluJ/FLAM SINE Alu 3 99 -213 17300 93 11 8 chr10 79851888 79854398 -65734890 - L1P LINE L1 -3640 2506 22 2074 107 0 4 chr10 79854402 79854708 -65734580 - AluY SINE Alu 0 305 1 1245 265 49 20 chr10 79854766 79855233 -65734055 - L1MDa LINE L1 -4469 2094 1463 754 171 0 16 chr10 79855243 79855372 -65733916 + FLAM_C SINE Alu 3 129 -14 316 294 27 17 chr10 79855390 79855549 -65733739 - L1MDa LINE L1 -4840 1542 1292 * 622 180 80 0 chr10 79855548 79855698 -65733590 - L1MDa LINE L1 -5161 1402 1241 670 186 54 8 chr10 79855770 79855899 -65733389 + MER1B DNA MER1_type 2 136 -161 808 19 0 29 chr10 79856004 79856107 -65733181 - L1PA4 LINE L1 0 6155 6056 1271 129 16 21 chr10 79856113 79856307 -65732981 + MER1B DNA MER1_type 142 334 -5 891 295 126 7 chr10 79856319 79856780 -65732508 - L1MDa LINE L1 -5824 739 224 664 254 118 71 chr10 79856777 79857063 -65732225 - L1MEc LINE L1 -4842 1554 1283 * 378 0 0 0 chr10 79857063 79857105 -65732183 + (GAA)n Simple_repeat Simple_repeat 2 43 0 664 254 118 71 chr10 79857105 79857205 -65732083 - L1MEc LINE L1 -5113 1283 1189 2209 119 0 0 chr10 79857205 79857515 -65731773 - AluSg SINE Alu 0 310 1 1405 193 98 0 chr10 79857517 79857791 -65731497 - AluJb SINE Alu -10 302 2 664 254 118 71 chr10 79857791 79858072 -65731216 - L1MEc LINE L1 -5207 1189 852 424 263 187 75 chr10 79858086 79858364 -65730924 - L1MEc LINE L1 -5940 456 148 1781 150 0 42 chr10 79858523 79858829 -65730459 - AluSx SINE Alu -19 293 1 2115 159 59 31 chr10 79859073 79859495 -65729793 - Tigger2a DNA MER2_type 0 434 1 28 29 0 0 chr10 79860653 79860688 -65728600 + AT_rich Low_complexity Low_complexity 1 35 0 1721 146 3 28 chr10 79860928 79861241 -65728047 + AluSx SINE Alu 1 306 0 21 0 0 0 chr10 79861451 79861472 -65727816 + AT_rich Low_complexity Low_complexity 1 21 0 5154 129 11 1 chr10 79861939 79862724 -65726564 - Tigger1 DNA MER2_type -44 2374 1582 496 154 8 31 chr10 79862724 79862977 -65726311 - AluJb SINE Alu -18 294 1 8989 139 45 16 chr10 79862977 79863312 -65725976 - Tigger1 DNA MER2_type -829 1589 1265 2132 115 7 0 chr10 79863312 79863607 -65725681 + AluSq SINE Alu 1 297 -16 8989 139 45 16 chr10 79863607 79864787 -65724501 - Tigger1 DNA MER2_type -1153 1265 30 2006 89 89 0 chr10 79864990 79865270 -65724018 + AluSx SINE Alu 1 305 -7 701 251 17 6 chr10 79866126 79866301 -65722987 - L1MB7 LINE L1 -12 6172 5996 375 78 0 0 chr10 79866516 79866552 -65722736 + (CA)n Simple_repeat Simple_repeat 1 87 0 375 78 0 0 chr10 79866552 79866603 -65722685 + (CA)n Simple_repeat Simple_repeat 2 52 0 272 27 27 0 chr10 79867082 79867119 -65722169 + (TTTTTG)n Simple_repeat Simple_repeat 6 43 0 21 0 0 0 chr10 79867434 79867455 -65721833 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr10 79867530 79867555 -65721733 + AT_rich Low_complexity Low_complexity 1 25 0 23 54 0 0 chr10 79871044 79871081 -65718207 + AT_rich Low_complexity Low_complexity 1 37 0 2192 201 95 79 chr10 79871417 79872514 -65716774 + L1MC3 LINE L1 5987 7222 -563 303 277 10 30 chr10 79872514 79872615 -65716673 + MLT1F1 LTR MaLR 36 134 -433 2192 201 95 79 chr10 79872615 79873182 -65716106 + L1MC3 LINE L1 7222 7778 -7 2343 81 16 3 chr10 79874793 79875102 -65714186 + AluSp SINE Alu 1 313 0 564 231 77 59 chr10 79875207 79875596 -65713692 - L1MEd LINE L1 -5019 1100 705 830 299 37 40 chr10 79875600 79875951 -65713337 - L1MEd LINE L1 -5448 671 322 675 236 97 12 chr10 79876010 79876175 -65713113 + MER63A DNA MER1_type 1 179 -31 351 287 116 64 chr10 79876202 79876453 -65712835 - L1MEd LINE L1 -5853 266 3 550 225 142 87 chr10 79876844 79877332 -65711956 + L1MC4 LINE L1 5689 6148 -1660 1602 75 5 0 chr10 79877332 79877544 -65711744 - L1PA7 LINE L1 -3 6151 5939 550 225 142 87 chr10 79877544 79877727 -65711561 + L1MC4 LINE L1 6148 6319 -1489 2316 78 0 0 chr10 79877727 79878034 -65711254 - AluY SINE Alu 0 307 1 550 225 142 87 chr10 79878034 79878374 -65710914 + L1MC4 LINE L1 6319 6610 -1198 1423 237 109 12 chr10 79878385 79878807 -65710481 - MLT1C LTR MaLR -2 465 3 1482 271 65 50 chr10 79878810 79879508 -65709780 + L1MC4 LINE L1 6801 7508 -534 318 224 59 35 chr10 79880336 79880421 -65708867 - L2 LINE L2 -5 3308 3222 912 226 52 9 chr10 79880453 79880683 -65708605 - MIR SINE MIR 0 262 23 1073 145 77 9 chr10 79880683 79880904 -65708384 - L1MD1 LINE L1 0 6242 6007 573 206 0 0 chr10 79880906 79881008 -65708280 - L1MD1 LINE L1 -596 5763 5662 800 152 14 29 chr10 79881009 79881147 -65708141 + AluJo SINE Alu 1 136 -176 512 289 57 0 chr10 79881267 79881426 -65707862 - L2 LINE L2 -280 3033 2866 256 269 0 0 chr10 79881461 79881528 -65707760 - L2 LINE L2 -626 2688 2622 846 0 0 0 chr10 79881534 79881628 -65707660 + AluYa5/8 SINE Alu 212 305 -5 568 232 66 20 chr10 79881636 79881787 -65707501 - L2 LINE L2 -704 2610 2453 2023 135 0 0 chr10 79881995 79882277 -65707011 + AluSx SINE Alu 1 282 -30 198 0 0 0 chr10 79882277 79882299 -65706989 + (CAAT)n Simple_repeat Simple_repeat 1 22 0 279 167 0 0 chr10 79882307 79882349 -65706939 + Alu SINE Alu 240 281 -19 1440 200 4 8 chr10 79882450 79882715 -65706573 + AluJo SINE Alu 4 267 -45 25 0 0 0 chr10 79882715 79882740 -65706548 + AT_rich Low_complexity Low_complexity 1 25 0 243 273 68 0 chr10 79884850 79884938 -65704350 + MER5C DNA MER1_type 31 124 -200 1452 123 40 6 chr10 79884950 79885380 -65703908 - LTR54 LTR ERV1 -5 505 1 232 246 87 0 chr10 79885512 79885581 -65703707 + MER5C DNA MER1_type 249 323 -1 301 266 22 93 chr10 79885839 79885978 -65703310 - MIR SINE MIR -64 198 70 1271 276 56 19 chr10 79886025 79886558 -65702730 + L1M4 LINE L1 1289 1841 -4543 339 242 32 11 chr10 79886717 79886812 -65702476 + L1M4 LINE L1 1898 1994 -4569 849 87 0 0 chr10 79886816 79886920 -65702368 + AluSc SINE Alu 154 257 -52 626 60 0 0 chr10 79886920 79887003 -65702285 - Tigger2 DNA MER2_type -239 2479 2397 282 234 39 0 chr10 79887046 79887123 -65702165 + L1M4 LINE L1 2189 2268 -4295 503 225 92 46 chr10 79887145 79887385 -65701903 + L1M4 LINE L1 5078 5328 -1054 455 228 48 21 chr10 79887375 79887520 -65701768 + L1M4 LINE L1 4112 4260 -1886 * 334 290 97 7 chr10 79887523 79887678 -65701610 + L1M4c LINE L1 3348 3516 -2866 920 316 128 60 chr10 79887811 79888769 -65700519 + L2 LINE L2 2186 3230 -83 2071 101 10 24 chr10 79888769 79889066 -65700222 - AluSg SINE Alu -17 293 1 920 316 128 60 chr10 79889066 79889148 -65700140 + L2 LINE L2 3230 3305 -8 22 88 0 0 chr10 79890282 79890339 -65698949 + AT_rich Low_complexity Low_complexity 1 57 0 539 340 48 0 chr10 79890764 79890952 -65698336 - MIR SINE MIR -61 201 5 194 310 58 58 chr10 79891379 79891466 -65697822 - L2 LINE L2 0 3272 3186 1756 188 110 8 chr10 79891642 79892064 -65697224 + L1MB8 LINE L1 5322 5777 -407 * 1926 157 51 11 chr10 79892056 79892536 -65696752 + L1MA9 LINE L1 4947 5440 -753 750 178 0 16 chr10 79892550 79892679 -65696609 + FLAM_A SINE Alu 8 134 -8 4036 166 60 18 chr10 79892709 79892900 -65696388 + L1MA9 LINE L1 5433 5614 -698 2031 131 0 0 chr10 79892900 79893210 -65696078 + AluSx SINE Alu 1 310 0 4036 166 60 18 chr10 79893210 79893861 -65695427 + L1MA9 LINE L1 5614 6312 0 1647 189 43 20 chr10 79893861 79894252 -65695036 + L1MB8 LINE L1 5774 6173 -5 183 294 59 0 chr10 79896222 79896273 -65693015 + MIR SINE MIR 99 152 -56 257 208 19 0 chr10 79896827 79896880 -65692408 + MER103 DNA DNA 82 135 -31 635 225 107 112 chr10 79897591 79898125 -65691163 - MER34 LTR ERV1 -6 536 6 491 316 18 6 chr10 79898198 79898366 -65690922 + CT-rich Low_complexity Low_complexity 2 171 0 258 163 0 75 chr10 79898378 79898458 -65690830 + C-rich Low_complexity Low_complexity 2 75 0 568 166 119 129 chr10 79898702 79898895 -65690393 - MER34 LTR ERV1 -358 227 1 419 265 44 29 chr10 79898981 79899117 -65690171 + MIR SINE MIR 116 253 -9 2094 130 3 0 chr10 79899194 79899486 -65689802 + AluSx SINE Alu 1 293 -19 518 147 0 101 chr10 79899499 79899608 -65689680 + FLAM_A SINE Alu 25 122 -20 436 263 95 95 chr10 79899628 79899818 -65689470 + MIR SINE MIR 61 250 -12 1038 213 14 112 chr10 79900271 79900529 -65688759 - MLT2C1 LTR ERVL 0 397 198 435 34 17 0 chr10 79900529 79900588 -65688700 - L1PA4 LINE L1 -3 6152 6093 1038 213 14 112 chr10 79900588 79900766 -65688522 - MLT2C1 LTR ERVL -199 198 4 262 337 119 0 chr10 79901091 79901192 -65688096 + L2 LINE L2 3149 3261 -11 1645 174 10 30 chr10 79901326 79901625 -65687663 + AluJb SINE Alu 1 293 -19 283 266 150 0 chr10 79901692 79901805 -65687483 + L2 LINE L2 3184 3313 0 225 0 0 0 chr10 79902370 79902395 -65686893 + (T)n Simple_repeat Simple_repeat 1 25 0 26 50 0 0 chr10 79905680 79905720 -65683568 + AT_rich Low_complexity Low_complexity 1 40 0 255 317 175 0 chr10 79905763 79905883 -65683405 + MIR SINE MIR 3 143 -119 877 226 91 43 chr10 79905883 79906394 -65682894 - MER39 LTR ERV1 0 687 8 338 272 107 0 chr10 79906409 79906512 -65682776 + MIR SINE MIR 145 258 -4 1010 153 71 46 chr10 79906534 79906730 -65682558 + AluJo SINE Alu 11 211 -101 1920 88 0 25 chr10 79906736 79906814 -65682474 - L1P LINE L1 -4215 1931 1853 2185 89 0 4 chr10 79906814 79907095 -65682193 - AluSc SINE Alu -13 296 17 1920 88 0 25 chr10 79907095 79907301 -65681987 - L1P LINE L1 -4293 1853 1654 * 7353 108 8 2 chr10 79907300 79907695 -65681593 + L1P LINE L1 2447 2838 -3308 2558 34 24 0 chr10 79907695 79907993 -65681295 + AluY SINE Alu 1 305 -6 7353 108 8 2 chr10 79907993 79908717 -65680571 + L1P LINE L1 2838 3573 -2573 4935 52 7 0 chr10 79908717 79909326 -65679962 + L1PA7 LINE L1 5535 6150 -4 1372 194 9 41 chr10 79909422 79909741 -65679547 - AluJb SINE Alu -3 309 1 2128 110 3 7 chr10 79910300 79910590 -65678698 + AluSx SINE Alu 1 289 -23 203 61 30 0 chr10 79910593 79910626 -65678662 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 816 224 131 4 chr10 79910640 79910885 -65678403 - L1MC4a LINE L1 -820 6988 6713 1522 205 20 3 chr10 79910891 79911188 -65678100 + AluJb SINE Alu 3 304 -8 324 184 44 9 chr10 79911188 79911302 -65677986 + GA-rich Low_complexity Low_complexity 1 118 0 1140 251 69 6 chr10 79911308 79911670 -65677618 - L1MC4 LINE L1 -1238 6804 6420 1395 201 65 14 chr10 79911672 79911950 -65677338 + AluJb SINE Alu 1 292 -20 527 302 67 22 chr10 79912309 79912624 -65676664 + L1MEc LINE L1 37 365 -6031 543 256 36 12 chr10 79912692 79912942 -65676346 + L1M4 LINE L1 4228 4483 -1663 1563 130 0 0 chr10 79913289 79913504 -65675784 + AluSg/x SINE Alu 84 298 -12 1693 166 28 47 chr10 79913505 79913866 -65675422 + L1MB2 LINE L1 5778 6131 -40 846 153 0 0 chr10 79913867 79913991 -65675297 + AluJb SINE Alu 3 126 -186 283 372 34 7 chr10 79914168 79914316 -65674972 + L2 LINE L2 2938 3089 -224 26 0 0 0 chr10 79914635 79914661 -65674627 + AT_rich Low_complexity Low_complexity 1 26 0 364 300 2 31 chr10 79914866 79915013 -65674275 + FLAM_A SINE Alu 1 123 -10 2120 144 0 0 chr10 79915785 79916097 -65673191 - AluSq SINE Alu -1 312 1 21 36 0 0 chr10 79916323 79916351 -65672937 + AT_rich Low_complexity Low_complexity 1 28 0 396 246 85 15 chr10 79917044 79917174 -65672114 + MIR3 SINE MIR 57 195 -13 237 108 0 0 chr10 79917413 79917450 -65671838 + (TG)n Simple_repeat Simple_repeat 1 37 0 1849 181 0 3 chr10 79917520 79917813 -65671475 + AluJo SINE Alu 1 292 -20 323 208 0 39 chr10 79917831 79917908 -65671380 - AluJo SINE Alu -9 293 220 2533 34 24 0 chr10 79918012 79918307 -65670981 - AluY SINE Alu -9 302 1 2748 101 0 0 chr10 79918307 79918702 -65670586 - L1P LINE L1 -3305 2841 2447 1920 88 0 25 chr10 79918701 79918907 -65670381 + L1P LINE L1 1654 1853 -4293 * 2185 89 0 4 chr10 79918907 79919188 -65670100 + AluSc SINE Alu 17 296 -13 1920 88 0 25 chr10 79919188 79919266 -65670022 + L1P LINE L1 1853 1931 -4215 989 175 68 44 chr10 79919272 79919478 -65669810 - AluJo SINE Alu -101 211 1 3501 137 4 6 chr10 79920070 79920594 -65668694 + MER1A DNA MER1_type 1 523 -4 24 77 0 0 chr10 79920618 79920670 -65668618 + AT_rich Low_complexity Low_complexity 1 52 0 2217 104 0 3 chr10 79921356 79921645 -65667643 + AluY SINE Alu 3 290 -21 24 96 0 0 chr10 79922017 79922090 -65667198 + AT_rich Low_complexity Low_complexity 1 73 0 1783 134 14 18 chr10 79922981 79923257 -65666031 - AluSx SINE Alu -17 295 21 521 300 163 23 chr10 79923280 79923660 -65665628 - L2 LINE L2 -234 3038 2619 1082 259 104 68 chr10 79923662 79924071 -65665217 + L2 LINE L2 2482 2907 -406 704 185 8 8 chr10 79924071 79924201 -65665087 - FLAM_A SINE Alu -3 130 1 1082 259 104 68 chr10 79924201 79924346 -65664942 + L2 LINE L2 2907 3045 -268 1273 148 0 0 chr10 79924905 79925087 -65664201 - AluJb SINE Alu -128 184 3 527 214 116 56 chr10 79925192 79925407 -65663881 - MER119 DNA MER1_type 0 583 356 6094 141 58 8 chr10 79925408 79926465 -65662823 + Tigger2 DNA MER2_type 1 1109 -1609 5866 145 16 25 chr10 79926457 79927453 -65661835 + Tigger2 DNA MER2_type 1479 2465 -253 1906 161 41 19 chr10 79927453 79927820 -65661468 - THE1C LTR MaLR 0 375 1 1262 169 22 13 chr10 79927828 79928059 -65661229 + Tigger2 DNA MER2_type 2486 2718 0 498 288 36 10 chr10 79928059 79928336 -65660952 - MER119 DNA MER1_type -228 355 1 184 375 48 52 chr10 79928927 79929178 -65660110 + L2 LINE L2 2725 2974 -340 544 217 50 0 chr10 79929200 79929320 -65659968 - MER58B DNA MER1_type 0 341 216 201 308 11 0 chr10 79929334 79929425 -65659863 + A-rich Low_complexity Low_complexity 4 95 0 28 29 0 0 chr10 79929862 79929897 -65659391 + AT_rich Low_complexity Low_complexity 1 35 0 345 374 26 36 chr10 79930214 79930409 -65658879 + MIR3 SINE MIR 8 200 -8 1816 170 40 10 chr10 79930467 79930839 -65658449 - L1MB5 LINE L1 -73 6101 5724 652 226 110 7 chr10 79931858 79932004 -65657284 + MER5A DNA MER1_type 2 162 -27 308 285 93 40 chr10 79932376 79932527 -65656761 - MIR SINE MIR -48 160 2 2429 61 0 0 chr10 79932726 79933019 -65656269 - AluY SINE Alu -18 293 1 538 248 42 64 chr10 79933050 79933361 -65655927 + L1MC4 LINE L1 6468 6771 -1271 1423 237 109 12 chr10 79933372 79933794 -65655494 - MLT1C LTR MaLR -2 465 3 1482 271 65 50 chr10 79933797 79934495 -65654793 + L1MC4 LINE L1 6801 7508 -534 318 224 59 35 chr10 79935323 79935408 -65653880 - L2 LINE L2 -5 3308 3222 912 226 52 9 chr10 79935440 79935670 -65653618 - MIR SINE MIR 0 262 23 1073 145 77 9 chr10 79935670 79935891 -65653397 - L1MD1 LINE L1 0 6242 6007 573 206 0 0 chr10 79935893 79935995 -65653293 - L1MD1 LINE L1 -596 5763 5662 800 152 14 29 chr10 79935996 79936134 -65653154 + AluJo SINE Alu 1 136 -176 684 243 0 0 chr10 79936832 79936972 -65652316 + FRAM SINE Alu 13 152 -24 1674 16 0 0 chr10 79937070 79937263 -65652025 - L1PA4 LINE L1 -255 5900 5708 1922 49 4 0 chr10 79937265 79937509 -65651779 + L1PA4 LINE L1 5910 6154 -1 2468 81 0 0 chr10 79937847 79938154 -65651134 + AluY SINE Alu 1 307 -4 610 214 159 0 chr10 79938219 79938364 -65650924 - AluJo SINE Alu -25 287 120 607 202 121 29 chr10 79938369 79938542 -65650746 + L2 LINE L2 3125 3313 0 677 196 0 36 chr10 79938919 79939057 -65650231 + FLAM_A SINE Alu 1 133 0 1481 176 0 26 chr10 79939267 79939419 -65649869 + AluJo SINE Alu 1 145 -167 1861 132 79 25 chr10 79939419 79939775 -65649513 - THE1C LTR MaLR 0 375 1 1481 176 0 26 chr10 79939775 79939889 -65649399 + AluJo SINE Alu 145 260 -52 402 305 124 62 chr10 79940047 79940467 -65648821 + HAL1 LINE L1 148 593 -1914 304 220 55 92 chr10 79940637 79940746 -65648542 + HAL1 LINE L1 809 913 -1594 882 294 64 13 chr10 79940747 79941202 -65648086 + HAL1 LINE L1 1242 1719 -788 1246 134 0 0 chr10 79941206 79941385 -65647903 + AluSg/x SINE Alu 132 310 0 404 268 164 30 chr10 79941510 79941846 -65647442 + HAL1 LINE L1 2002 2382 -125 27 62 0 0 chr10 79941910 79941958 -65647330 + AT_rich Low_complexity Low_complexity 1 48 0 25 31 0 0 chr10 79942319 79942351 -65646937 + AT_rich Low_complexity Low_complexity 1 32 0 549 145 0 0 chr10 79942387 79942470 -65646818 + FLAM_A SINE Alu 35 117 -25 305 281 62 0 chr10 79942472 79942568 -65646720 - L1MC4 LINE L1 -1323 6719 6618 300 298 0 53 chr10 79942586 79942680 -65646608 + L1MC4 LINE L1 6614 6702 -1340 894 164 0 33 chr10 79942889 79943068 -65646220 + FRAM SINE Alu 1 174 0 1637 219 75 11 chr10 79943155 79943594 -65645694 + L1MC4 LINE L1 7121 7587 -455 733 175 0 0 chr10 79943776 79943896 -65645392 - FLAM_A SINE Alu -3 139 20 1222 213 125 16 chr10 79943903 79944278 -65645010 + L1MC4 LINE L1 7627 8042 0 182 287 58 35 chr10 79944309 79944396 -65644892 - MIR SINE MIR -163 99 11 276 252 130 9 chr10 79944713 79944828 -65644460 + L1MC4 LINE L1 7807 8009 -26 614 250 0 29 chr10 79944829 79944965 -65644323 + FLAM_A SINE Alu 1 132 -1 231 283 0 0 chr10 79945006 79945059 -65644229 - L2 LINE L2 -1 3271 3219 758 271 5 20 chr10 79947191 79947390 -65641898 - MIR SINE MIR -26 236 41 288 0 0 0 chr10 79947829 79947861 -65641427 + (CA)n Simple_repeat Simple_repeat 2 33 0 792 248 76 32 chr10 79947974 79948288 -65641000 - L1MC4 LINE L1 -362 7680 7353 21 82 0 0 chr10 79948765 79948814 -65640474 + AT_rich Low_complexity Low_complexity 1 49 0 331 242 117 47 chr10 79949442 79949570 -65639718 - MIR SINE MIR -77 185 49 697 279 61 38 chr10 79949726 79949836 -65639452 - L1M4 LINE L1 -1302 4844 4738 1875 144 24 45 chr10 79949836 79950218 -65639070 - THE1C LTR MaLR -1 374 1 697 279 61 38 chr10 79950218 79950533 -65638755 - L1M4 LINE L1 -1408 4738 4409 287 230 60 0 chr10 79950596 79950715 -65638573 - L1ME LINE L1 -628 5536 5410 1011 152 0 0 chr10 79950726 79950911 -65638377 - FRAM SINE Alu 0 181 1 1102 307 93 11 chr10 79950911 79951744 -65637544 - L1ME LINE L1 -743 5403 4511 26 0 0 0 chr10 79951761 79951787 -65637501 + AT_rich Low_complexity Low_complexity 1 26 0 1490 142 132 12 chr10 79951795 79952152 -65637136 + MSTA LTR MaLR 1 427 -1 7868 198 38 2 chr10 79952153 79953747 -65635541 + MSTA-int LTR MaLR 1 1651 0 2077 142 134 8 chr10 79953747 79954127 -65635161 + MSTA LTR MaLR 1 428 0 457 297 96 42 chr10 79955159 79955398 -65633890 + HAL1b LINE L1 13 264 -1084 284 227 27 0 chr10 79955518 79955593 -65633695 + HAL1b LINE L1 306 382 -966 709 177 0 23 chr10 79955644 79955774 -65633514 + AluJo SINE Alu 3 129 -183 1016 176 0 27 chr10 79955822 79956009 -65633279 + AluJo SINE Alu 131 312 0 328 295 119 0 chr10 79956011 79956221 -65633067 + HAL1b LINE L1 400 634 -714 27 29 0 0 chr10 79956274 79956308 -65632980 + AT_rich Low_complexity Low_complexity 1 34 0 221 167 0 0 chr10 79956798 79956840 -65632448 + A-rich Low_complexity Low_complexity 1 42 0 1652 168 18 3 chr10 79956926 79957211 -65632077 + AluJb SINE Alu 1 289 -23 398 316 97 15 chr10 79957430 79957626 -65631662 - L2 LINE L2 -2 3311 3100 1409 218 3 13 chr10 79957699 79957997 -65631291 + AluJo SINE Alu 2 296 -16 630 230 0 14 chr10 79958012 79958151 -65631137 + FLAM_C SINE Alu 1 137 -6 567 273 107 46 chr10 79958164 79958575 -65630713 + HAL1b LINE L1 456 891 -457 1598 190 3 14 chr10 79958713 79959002 -65630286 + AluJb SINE Alu 1 286 -26 19295 25 5 0 chr10 79959705 79962803 -65626485 + L1PA4 LINE L1 3058 6150 -5 25 0 0 0 chr10 79962897 79962922 -65626366 + AT_rich Low_complexity Low_complexity 1 25 0 1460 93 0 0 chr10 79962942 79963136 -65626152 + MER41A LTR ERV1 361 554 0 1227 181 0 13 chr10 79963315 79963547 -65625741 + MER30 DNA MER1_type 2 230 0 2490 51 0 0 chr10 79963585 79963878 -65625410 + AluY SINE Alu 1 293 -18 308 285 93 40 chr10 79964077 79964228 -65625060 + MIR SINE MIR 2 160 -48 652 226 110 7 chr10 79964600 79964746 -65624542 - MER5A DNA MER1_type -27 162 2 1816 170 40 10 chr10 79965765 79966137 -65623151 + L1MB5 LINE L1 5724 6101 -73 345 374 26 36 chr10 79966195 79966390 -65622898 - MIR3 SINE MIR -8 200 8 28 29 0 0 chr10 79966701 79966736 -65622552 + AT_rich Low_complexity Low_complexity 1 35 0 201 308 11 0 chr10 79967173 79967264 -65622024 + T-rich Low_complexity Low_complexity 4 95 0 544 217 50 0 chr10 79967278 79967398 -65621890 + MER58B DNA MER1_type 216 341 0 184 375 48 52 chr10 79967420 79967671 -65621617 - L2 LINE L2 -340 2974 2725 513 285 36 10 chr10 79968262 79968539 -65620749 + MER119 DNA MER1_type 1 355 -228 1262 169 22 13 chr10 79968539 79968770 -65620518 - Tigger2 DNA MER2_type 0 2718 2486 1935 158 41 19 chr10 79968778 79969145 -65620143 + THE1C LTR MaLR 1 375 0 * 5863 145 16 25 chr10 79969145 79970141 -65619147 - Tigger2 DNA MER2_type -253 2465 1479 6094 141 58 8 chr10 79970133 79971190 -65618098 - Tigger2 DNA MER2_type -1609 1109 1 527 214 116 56 chr10 79971191 79971406 -65617882 + MER119 DNA MER1_type 356 583 0 1894 150 10 7 chr10 79971511 79971811 -65617477 + AluJb SINE Alu 3 303 -9 533 224 168 6 chr10 79972621 79972782 -65616506 - MIR SINE MIR -10 252 66 21 0 0 0 chr10 79973100 79973121 -65616167 + AT_rich Low_complexity Low_complexity 1 21 0 779 233 6 34 chr10 79973131 79973307 -65615981 - FAM SINE Alu -4 171 1 13666 208 70 48 chr10 79973330 79973375 -65615913 - L1MA5A LINE L1 -9 6930 6887 2325 92 0 0 chr10 79973375 79973669 -65615619 - AluSc SINE Alu -15 294 1 13666 208 70 48 chr10 79973669 79974897 -65614391 - L1MA5A LINE L1 -52 6887 5688 1937 163 0 0 chr10 79974897 79975186 -65614102 - AluJb SINE Alu -23 289 1 13666 208 70 48 chr10 79975186 79978990 -65610298 - L1MA5A LINE L1 -1251 5688 1429 1287 185 0 4 chr10 79978990 79979217 -65610071 - AluJb SINE Alu 0 312 87 13666 208 70 48 chr10 79979217 79980677 -65608611 - L1MA5A LINE L1 -5510 1429 4 2079 126 13 13 chr10 79980691 79981001 -65608287 - AluSx SINE Alu -2 310 1 989 111 39 11 chr10 79981035 79981332 -65607956 - THE1A LTR MaLR 0 355 1 1862 174 0 0 chr10 79981584 79981882 -65607406 + AluJb SINE Alu 1 298 -14 509 168 180 70 chr10 79983168 79983412 -65605876 - Charlie5 DNA MER1_type 0 2622 2352 * 543 225 88 0 chr10 79983410 79983570 -65605718 - Charlie5 DNA MER1_type -2412 200 27 270 194 15 15 chr10 79983577 79983644 -65605644 - Charlie5 DNA MER1_type -2507 105 39 344 273 0 0 chr10 79983740 79983817 -65605471 - L1ME LINE L1 -439 5682 5606 1517 168 120 54 chr10 79986196 79986651 -65602637 - MER39 LTR ERV1 0 707 1 421 276 92 36 chr10 79987225 79987421 -65601867 + MIR SINE MIR 56 262 0 204 304 9 27 chr10 79987615 79987727 -65601561 + CT-rich Low_complexity Low_complexity 5 114 0 224 313 152 22 chr10 79987758 79987988 -65601300 + L2 LINE L2 2257 2516 -798 29 60 0 0 chr10 79988419 79988469 -65600819 + AT_rich Low_complexity Low_complexity 1 50 0 180 0 0 0 chr10 79988565 79988585 -65600703 + (ATTG)n Simple_repeat Simple_repeat 3 22 0 1587 202 0 0 chr10 79988588 79988870 -65600418 - AluJb SINE Alu -30 282 1 745 198 0 0 chr10 79988929 79989050 -65600238 + FLAM_A SINE Alu 1 121 -12 2143 141 0 0 chr10 79989820 79990132 -65599156 - AluSq SINE Alu -1 312 1 348 221 15 59 chr10 79990141 79990277 -65599011 - L1ME1 LINE L1 -1 6165 6036 36 70 0 0 chr10 79990318 79990389 -65598899 + AT_rich Low_complexity Low_complexity 1 71 0 2485 52 10 0 chr10 79991257 79991562 -65597726 + AluY SINE Alu 1 308 -3 4557 162 39 18 chr10 79992662 79993709 -65595579 + L1MB4 LINE L1 5107 6174 -6 191 293 85 24 chr10 79993729 79993811 -65595477 + L3 LINE CR1 218 304 -1273 222 331 157 27 chr10 79993994 79994326 -65594962 + L3 LINE CR1 477 851 -726 1660 286 27 25 chr10 79994708 79994820 -65594468 + L1ME1 LINE L1 149 259 -6137 1953 134 20 3 chr10 79994820 79995112 -65594176 + AluSx SINE Alu 1 297 -15 1660 286 27 25 chr10 79995112 79995517 -65593771 + L1ME1 LINE L1 259 667 -5729 1447 245 89 39 chr10 79995526 79995706 -65593582 + L1ME1 LINE L1 3439 3609 -2606 1665 185 7 4 chr10 79995706 79996008 -65593280 - AluJo SINE Alu 0 304 2 1447 245 89 39 chr10 79996008 79996389 -65592899 + L1ME1 LINE L1 3609 4029 -2186 1623 141 83 0 chr10 79996392 79996668 -65592620 + AluSq SINE Alu 1 299 -14 2131 214 83 38 chr10 79996695 79996795 -65592493 + L1ME1 LINE L1 4240 4334 -1881 2122 102 0 59 chr10 79996795 79997117 -65592171 + AluSx SINE Alu 1 303 -9 2131 214 83 38 chr10 79997117 79997773 -65591515 + L1ME1 LINE L1 4334 5030 -1185 * 2217 243 82 21 chr10 79997755 79998460 -65590828 + L1ME1 LINE L1 5483 6230 -5 21 36 0 0 chr10 79999105 79999133 -65590155 + AT_rich Low_complexity Low_complexity 1 28 0 1591 201 0 7 chr10 79999355 79999648 -65589640 + AluJo SINE Alu 1 291 -21 2069 130 3 19 chr10 79999757 80000064 -65589224 - AluSq SINE Alu -11 302 1 263 206 0 134 chr10 80000192 80000289 -65588999 + MIR3 SINE MIR 125 208 0 21 0 0 0 chr10 80000324 80000345 -65588943 + AT_rich Low_complexity Low_complexity 1 21 0 2667 148 37 46 chr10 80000644 80001210 -65588078 - L1MB4 LINE L1 0 6180 5620 763 199 19 0 chr10 80001210 80001356 -65587932 - L1M3 LINE L1 -598 5573 5422 2092 112 10 0 chr10 80002151 80002447 -65586841 + AluSx SINE Alu 1 299 -13 761 163 0 27 chr10 80003357 80003504 -65585784 - FLAM_C SINE Alu 0 143 1 29 28 0 0 chr10 80004319 80004355 -65584933 + AT_rich Low_complexity Low_complexity 1 36 0 34 24 0 0 chr10 80004578 80004619 -65584669 + AT_rich Low_complexity Low_complexity 1 41 0 1937 159 3 0 chr10 80004640 80004935 -65584353 - AluSx SINE Alu -16 296 1 367 239 0 87 chr10 80005107 80005179 -65584109 + L1MC4a LINE L1 7604 7660 -148 2196 125 0 0 chr10 80005179 80005491 -65583797 - AluSx SINE Alu 0 312 1 367 239 0 87 chr10 80005491 80005556 -65583732 + L1MC4a LINE L1 7660 7729 -79 848 171 141 5 chr10 80005575 80005774 -65583514 - L1MC4 LINE L1 -365 7677 7452 1207 154 16 0 chr10 80005775 80005963 -65583325 + AluJo SINE Alu 86 276 -36 490 286 68 0 chr10 80006000 80006133 -65583155 - L1MC4a LINE L1 -430 7378 7237 1448 163 0 0 chr10 80006135 80006350 -65582938 + AluJb SINE Alu 1 215 -97 903 226 73 5 chr10 80006358 80006562 -65582726 + MLT1F1 LTR MaLR 348 565 -2 463 176 92 17 chr10 80006564 80006683 -65582605 - L1MC4a LINE L1 -1410 6398 6271 1121 208 43 57 chr10 80006686 80007056 -65582232 - L1MC4a LINE L1 -1633 6175 5811 2165 92 0 0 chr10 80007057 80007376 -65581912 - AluY SINE Alu 0 319 1 649 103 0 103 chr10 80007404 80007521 -65581767 - FLAM_C SINE Alu -27 116 12 1148 265 19 3 chr10 80007526 80007835 -65581453 - L1MC4a LINE L1 -1982 5826 5513 619 283 80 11 chr10 80008423 80008610 -65580678 - MER21B LTR ERV1 -661 202 3 1966 110 48 0 chr10 80008771 80009043 -65580245 + AluSc SINE Alu 1 285 -24 305 185 0 0 chr10 80009068 80009122 -65580166 - AluSc SINE Alu 0 299 246 223 333 0 0 chr10 80009326 80009395 -65579893 - L2 LINE L2 -8 3305 3237 306 245 77 21 chr10 80011053 80011196 -65578092 - L1ME4a LINE L1 -6 6115 5965 526 192 128 18 chr10 80011365 80011555 -65577733 - L1MC4 LINE L1 -168 7827 7553 416 243 166 32 chr10 80011556 80011609 -65577679 - L1ME4a LINE L1 -181 5940 5895 270 73 0 0 chr10 80011609 80011650 -65577638 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 2221 107 0 23 chr10 80011653 80011827 -65577461 - AluSc SINE Alu -6 303 127 225 0 0 0 chr10 80011827 80011852 -65577436 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 2117 106 3 3 chr10 80011852 80012134 -65577154 - AluSp SINE Alu -31 282 1 2221 107 0 23 chr10 80012134 80012268 -65577020 - AluSc SINE Alu -180 129 1 416 243 166 32 chr10 80012268 80012457 -65576831 - L1ME4a LINE L1 -227 5894 5661 829 108 190 0 chr10 80012598 80012756 -65576532 + MER53 DNA DNA 2 189 0 488 236 47 0 chr10 80012888 80012994 -65576294 + L2 LINE L2 3203 3313 0 368 312 104 8 chr10 80013121 80013246 -65576042 - L2 LINE L2 -2 3270 3134 1685 180 3 10 chr10 80013612 80013912 -65575376 - AluJb SINE Alu -14 298 1 2049 137 3 0 chr10 80014282 80014582 -65574706 + AluSx SINE Alu 1 301 -11 1839 102 4 15 chr10 80015383 80015647 -65573641 + THE1B LTR MaLR 104 364 0 230 215 185 0 chr10 80016595 80016660 -65572628 - MLT1C LTR MaLR -382 85 9 227 167 21 0 chr10 80016668 80016716 -65572572 - L1M4 LINE L1 -387 5791 5743 * 617 251 11 0 chr10 80016715 80016890 -65572398 - L1MC4a LINE L1 -1815 5993 5817 344 245 45 0 chr10 80017133 80017300 -65571988 - L1MC4a LINE L1 -1901 5907 5709 * 544 266 72 14 chr10 80017299 80017506 -65571782 + L1ME3A LINE L1 5701 5919 -251 1724 257 43 31 chr10 80017520 80018060 -65571228 + L1ME LINE L1 25 570 -5500 1768 66 33 52 chr10 80018092 80018363 -65570925 - AluY SINE Alu -8 303 38 226 318 116 31 chr10 80018841 80018970 -65570318 + L2 LINE L2 3164 3303 -10 191 259 35 17 chr10 80019232 80019290 -65569998 + L2 LINE L2 3214 3272 0 2227 107 0 13 chr10 80019703 80020013 -65569275 + AluSc SINE Alu 1 306 -3 18403 48 0 3 chr10 80020018 80022279 -65567009 + L1P LINE L1 7 2261 -3885 1746 198 35 25 chr10 80022455 80022850 -65566438 + MLT1C LTR MaLR 67 465 -2 1791 163 59 13 chr10 80022852 80023227 -65566061 + L1MB8 LINE L1 5787 6178 0 707 221 23 46 chr10 80023230 80023447 -65565841 + L1MC4a LINE L1 5974 6185 -1623 330 209 45 104 chr10 80023551 80023621 -65565667 + L1MC4 LINE L1 6512 6585 -1230 1775 98 104 45 chr10 80023621 80023908 -65565380 + AluSp SINE Alu 1 304 -9 330 209 45 104 chr10 80023908 80023920 -65565368 + L1MC4 LINE L1 6585 6596 -1219 246 62 0 0 chr10 80023920 80023952 -65565336 + (CA)n Simple_repeat Simple_repeat 1 32 0 330 209 45 104 chr10 80023952 80024002 -65565286 + L1MC4 LINE L1 6596 6667 -1148 * 3467 213 59 74 chr10 80024000 80025081 -65564207 + L1MC4a LINE L1 6717 7781 -27 22 0 0 0 chr10 80025098 80025120 -65564168 + AT_rich Low_complexity Low_complexity 1 22 0 592 243 51 23 chr10 80025124 80025301 -65563987 - L1ME LINE L1 -410 5711 5530 1398 176 8 8 chr10 80025870 80026115 -65563173 + AluJo SINE Alu 22 266 -46 365 380 68 34 chr10 80026845 80027200 -65562088 - L2 LINE L2 -368 2946 2580 387 0 0 0 chr10 80028404 80028447 -65560841 + (TG)n Simple_repeat Simple_repeat 2 44 0 703 205 25 43 chr10 80029760 80029921 -65559367 - MER58A DNA MER1_type 0 161 4 2092 116 0 0 chr10 80030265 80030542 -65558746 + AluSx SINE Alu 21 297 -15 1881 270 59 53 chr10 80030702 80031422 -65557866 + L1MEc LINE L1 37 764 -5632 2118 105 58 55 chr10 80031422 80031587 -65557701 + THE1B LTR MaLR 1 164 -200 2222 121 3 0 chr10 80031587 80031884 -65557404 + AluSq SINE Alu 1 298 -15 2118 105 58 55 chr10 80031884 80032081 -65557207 + THE1B LTR MaLR 164 364 0 1881 270 59 53 chr10 80032081 80032138 -65557150 + L1MEc LINE L1 764 819 -5577 244 218 18 18 chr10 80032165 80032220 -65557068 + AluYb8 SINE Alu 119 173 -135 1012 231 58 40 chr10 80032378 80032454 -65556834 + L1ME3 LINE L1 5677 5750 -412 2547 71 0 0 chr10 80032454 80032762 -65556526 - AluSc SINE Alu -1 308 1 1012 231 58 40 chr10 80032762 80033042 -65556246 + L1ME3 LINE L1 5750 6064 -98 26 0 0 0 chr10 80033191 80033217 -65556071 + AT_rich Low_complexity Low_complexity 1 26 0 870 140 0 22 chr10 80033926 80034062 -65555226 + AluJo SINE Alu 1 133 -169 22 56 0 19 chr10 80034248 80034278 -65555010 + AT_rich Low_complexity Low_complexity 1 31 -22 1350 142 150 0 chr10 80034278 80034525 -65554763 + AluJb SINE Alu 1 284 -18 22 56 0 19 chr10 80034525 80034548 -65554740 + AT_rich Low_complexity Low_complexity 31 53 0 898 221 0 0 chr10 80034728 80034891 -65554397 + AluJo SINE Alu 137 299 -13 1887 163 12 3 chr10 80036881 80037206 -65552082 - LTR39 LTR ERV1 -64 719 392 729 230 18 10 chr10 80037252 80037438 -65551850 - LTR39 LTR ERV1 -388 395 1 1055 160 0 22 chr10 80037445 80037626 -65551662 - FRAM SINE Alu 0 176 1 1386 201 22 26 chr10 80037655 80037968 -65551320 + THE1C LTR MaLR 64 375 0 700 190 61 6 chr10 80037991 80038154 -65551134 + MLT1D LTR MaLR 253 424 -81 266 271 150 14 chr10 80038685 80038892 -65550396 - L1MC/D LINE L1 -2015 5793 5559 256 90 144 99 chr10 80039243 80039354 -65549934 + Alu SINE Alu 209 298 -2 22 0 0 0 chr10 80039795 80039817 -65549471 + AT_rich Low_complexity Low_complexity 1 22 0 363 273 149 37 chr10 80039913 80040074 -65549214 + MIR3 SINE MIR 19 197 -11 1849 141 27 3 chr10 80040554 80040852 -65548436 + AluJo SINE Alu 3 307 -5 22 35 0 0 chr10 80041181 80041210 -65548078 + AT_rich Low_complexity Low_complexity 1 29 0 2502 69 3 0 chr10 80041304 80041608 -65547680 - AluSp SINE Alu -8 305 1 241 261 0 14 chr10 80041993 80042062 -65547226 - LTR33 LTR ERVL -453 68 1 2459 11 0 0 chr10 80042870 80043173 -65546115 + L1PA3 LINE L1 5865 6167 0 191 241 13 63 chr10 80043748 80043827 -65545461 - L2 LINE L2 -310 2962 2888 887 201 6 17 chr10 80043827 80044001 -65545287 + FAM SINE Alu 1 172 -3 213 162 0 88 chr10 80044077 80044145 -65545143 + A-rich Low_complexity Low_complexity 2 63 0 242 260 0 0 chr10 80044776 80044826 -65544462 - L2 LINE L2 -2 3311 3262 285 213 160 0 chr10 80044927 80045002 -65544286 + L2 LINE L2 3186 3272 0 358 241 23 53 chr10 80045196 80045387 -65543901 + MLT2F LTR ERVL 272 663 0 1627 148 53 25 chr10 80046835 80047118 -65542170 + AluJb SINE Alu 1 291 -21 293 180 0 0 chr10 80047509 80047559 -65541729 + FLAM SINE Alu 67 116 -17 306 0 0 0 chr10 80047577 80047611 -65541677 + (CA)n Simple_repeat Simple_repeat 2 35 0 1835 265 93 17 chr10 80047620 80048235 -65541053 + L1MEc LINE L1 817 1511 -4885 180 0 0 0 chr10 80048235 80048255 -65541033 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1835 265 93 17 chr10 80048255 80048455 -65540833 + L1MEc LINE L1 1511 1694 -4702 402 264 83 28 chr10 80048458 80048602 -65540686 + MIR SINE MIR 40 191 -71 1256 157 62 5 chr10 80048679 80048889 -65540399 + AluJb SINE Alu 84 305 -7 723 148 0 0 chr10 80050132 80050240 -65539048 - FLAM_C SINE Alu -35 108 1 780 244 234 34 chr10 80050313 80050722 -65538566 - MLT1F1 LTR MaLR -84 483 1 549 333 62 0 chr10 80050834 80051026 -65538262 - MIR SINE MIR -54 208 5 21 57 0 0 chr10 80051085 80051120 -65538168 + AT_rich Low_complexity Low_complexity 1 35 0 266 148 19 19 chr10 80051389 80051443 -65537845 + L1M4 LINE L1 4306 4359 -1787 24 0 0 0 chr10 80053102 80053126 -65536162 + AT_rich Low_complexity Low_complexity 1 24 0 2094 128 3 3 chr10 80053127 80053425 -65535863 + AluSq SINE Alu 1 298 -15 309 197 0 0 chr10 80053425 80053491 -65535797 + (CATATA)n Simple_repeat Simple_repeat 5 70 0 281 264 182 16 chr10 80054615 80054954 -65534334 - L1MC5 LINE L1 -49 7970 7612 389 279 49 24 chr10 80054960 80055488 -65533800 - L1MC5 LINE L1 -492 7495 7102 23 33 0 0 chr10 80059121 80059151 -65530137 + AT_rich Low_complexity Low_complexity 1 30 0 541 121 0 0 chr10 80059319 80059402 -65529886 - MER3 DNA MER1_type -1 208 126 280 86 0 0 chr10 80059401 80059436 -65529852 + U2 snRNA snRNA 1 35 -153 * 659 218 14 14 chr10 80059422 80059569 -65529719 - MER3 DNA MER1_type -58 151 5 290 293 13 0 chr10 80059852 80059927 -65529361 - L2 LINE L2 0 3272 3197 304 295 70 54 chr10 80060061 80060190 -65529098 - L2 LINE L2 -309 2963 2833 1456 72 0 0 chr10 80060379 80060572 -65528716 - L1P3 LINE L1 -377 5777 5585 2424 77 9 0 chr10 80060573 80060898 -65528390 + L1PA7 LINE L1 5825 6152 -2 506 266 63 42 chr10 80060945 80061247 -65528041 + L1M4c LINE L1 2219 2569 -3884 230 318 78 54 chr10 80061293 80061446 -65527842 - MIR SINE MIR 0 262 99 2202 105 3 10 chr10 80061446 80061752 -65527536 + AluSq SINE Alu 1 304 -9 230 318 78 54 chr10 80061752 80061840 -65527448 - MIR SINE MIR -163 99 15 198 0 0 0 chr10 80061926 80061948 -65527340 + (T)n Simple_repeat Simple_repeat 1 22 0 642 194 88 32 chr10 80062070 80062286 -65527002 - L1M4 LINE L1 -755 5391 5164 630 220 63 13 chr10 80062279 80062487 -65526801 - L1MB7 LINE L1 -5 6179 5953 * 229 191 254 0 chr10 80062792 80062855 -65526433 - MER2 DNA MER2_type 0 345 267 23 0 0 0 chr10 80062860 80062883 -65526405 + AT_rich Low_complexity Low_complexity 1 23 0 1084 167 10 29 chr10 80062895 80063099 -65526189 - MER2 DNA MER2_type -145 200 1 724 235 129 60 chr10 80063303 80063405 -65525883 - L1M4 LINE L1 -928 5218 5124 791 61 0 0 chr10 80063405 80063503 -65525785 - HY3 scRNA scRNA -1 100 3 724 235 129 60 chr10 80063503 80063834 -65525454 - L1M4 LINE L1 -1022 5124 4755 615 147 0 154 chr10 80063890 80064033 -65525255 + FLAM_A SINE Alu 1 121 -12 24 67 0 0 chr10 80064095 80064140 -65525148 + AT_rich Low_complexity Low_complexity 1 45 0 551 290 0 25 chr10 80064356 80064518 -65524770 - L2 LINE L2 -648 2666 2509 2389 99 0 0 chr10 80064526 80064828 -65524460 + AluSq SINE Alu 1 302 -11 626 221 72 11 chr10 80065005 80065186 -65524102 + MIR SINE MIR 2 193 -69 511 200 22 0 chr10 80065216 80065306 -65523982 - AluSg/x SINE Alu -26 286 195 284 114 0 0 chr10 80065306 80065350 -65523938 + L1 LINE L1 4575 4618 -1528 1934 145 0 3 chr10 80065363 80065653 -65523635 - AluJb SINE Alu -18 294 6 338 186 43 0 chr10 80065691 80065761 -65523527 + MIR SINE MIR 120 192 -70 2740 159 95 22 chr10 80066060 80066684 -65522604 - L1MC4a LINE L1 0 7808 7140 665 159 58 0 chr10 80066699 80066837 -65522451 - L1MC4a LINE L1 -522 7286 7141 321 271 35 0 chr10 80066867 80066952 -65522336 - MIR SINE MIR -112 150 63 1990 125 0 4 chr10 80067355 80067627 -65521661 - AluSc SINE Alu -27 282 12 777 231 49 46 chr10 80068837 80069144 -65520144 + L1MC5 LINE L1 7605 7912 -49 40 59 0 0 chr10 80069459 80069527 -65519761 + AT_rich Low_complexity Low_complexity 1 68 0 24 32 0 0 chr10 80070272 80070303 -65518985 + AT_rich Low_complexity Low_complexity 1 31 0 472 241 31 31 chr10 80070405 80070567 -65518721 + L1MC5 LINE L1 7763 7924 -37 1761 160 6 44 chr10 80070704 80071022 -65518266 + AluJo SINE Alu 5 310 -2 23335 90 11 17 chr10 80072150 80078591 -65510697 - L1PA7 LINE L1 -1 6468 1 21 36 0 0 chr10 80078722 80078750 -65510538 + AT_rich Low_complexity Low_complexity 1 28 0 2968 154 21 2 chr10 80078940 80079472 -65509816 + L1MB3 LINE L1 5626 6167 -16 1639 181 13 35 chr10 80079914 80080224 -65509064 - AluJb SINE Alu -9 303 1 3477 156 25 7 chr10 80080378 80081170 -65508118 - L1PA16 LINE L1 0 6165 5343 762 168 15 15 chr10 80081179 80081310 -65507978 - FLAM_C SINE Alu -12 131 1 2882 201 13 3 chr10 80081310 80081998 -65507290 - L1 LINE L1 -781 5365 4671 569 251 162 8 chr10 80083308 80083543 -65505745 - L1ME3A LINE L1 -8 6162 5892 2147 255 94 17 chr10 80083549 80084356 -65504932 - L1MC4 LINE L1 -1112 7725 6857 2564 253 79 53 chr10 80084386 80084575 -65504713 - L1MC4 LINE L1 -610 6355 6172 2181 98 0 0 chr10 80084575 80084898 -65504390 - AluSx SINE Alu 0 323 1 2564 253 79 53 chr10 80084898 80086468 -65502820 - L1MC4 LINE L1 -793 6172 4553 1753 166 17 3 chr10 80086480 80086776 -65502512 - AluJo SINE Alu -7 305 6 761 177 126 5 chr10 80086780 80086995 -65502293 - L1MC4 LINE L1 -3656 3285 3045 461 292 70 6 chr10 80087003 80087174 -65502114 - L1MC4 LINE L1 -4076 3046 2865 1934 141 30 10 chr10 80087174 80087478 -65501810 - AluSx SINE Alu -2 310 1 447 269 102 32 chr10 80087478 80087902 -65501386 - L1MC4 LINE L1 -4715 2407 2014 423 0 0 0 chr10 80087902 80087949 -65501339 + (TG)n Simple_repeat Simple_repeat 2 48 0 447 269 102 32 chr10 80087949 80088062 -65501226 - L1MC4 LINE L1 -5108 2014 1910 2166 118 0 0 chr10 80088062 80088358 -65500930 + AluSx SINE Alu 1 296 -16 447 269 102 32 chr10 80088358 80088547 -65500741 - L1MC4 LINE L1 -5212 1910 1388 5373 129 54 45 chr10 80088553 80088616 -65500672 - L1MA5A LINE L1 -2 6295 6234 1684 156 7 37 chr10 80088616 80088911 -65500377 - AluJo SINE Alu -26 286 1 5373 129 54 45 chr10 80088911 80090554 -65498734 - L1MA5A LINE L1 -63 6234 4558 22 0 0 0 chr10 80091310 80091332 -65497956 + AT_rich Low_complexity Low_complexity 1 22 0 196 252 58 126 chr10 80091550 80091615 -65497673 - MIR SINE MIR -98 110 53 1890 135 16 10 chr10 80091615 80091926 -65497362 + AluSp SINE Alu 1 313 0 196 252 58 126 chr10 80091926 80091963 -65497325 - MIR SINE MIR -155 53 15 643 195 0 77 chr10 80092027 80092196 -65497092 + MER20 DNA MER1_type 64 219 0 253 145 32 0 chr10 80092562 80092624 -65496664 + (TA)n Simple_repeat Simple_repeat 1 64 0 21 0 0 0 chr10 80093231 80093252 -65496036 + AT_rich Low_complexity Low_complexity 1 21 0 439 191 191 26 chr10 80093567 80093682 -65495606 + MER94 DNA DNA 1 134 0 221 271 200 0 chr10 80093935 80094005 -65495283 - L2 LINE L2 -20 3293 3210 220 403 0 0 chr10 80094092 80094169 -65495119 - L2 LINE L2 -215 3057 2981 2155 110 10 10 chr10 80095191 80095491 -65493797 - AluSx SINE Alu -12 300 1 1795 141 14 25 chr10 80096094 80096377 -65492911 + AluJo SINE Alu 13 292 -20 1999 141 0 28 chr10 80096505 80096825 -65492463 - AluSx SINE Alu -1 311 1 1823 154 26 10 chr10 80097782 80098087 -65491201 + AluSq SINE Alu 1 310 -3 648 219 8 105 chr10 80098087 80098325 -65490963 - L1ME2 LINE L1 -140 6024 5810 635 228 143 32 chr10 80098326 80098515 -65490773 - MER63A DNA MER1_type 0 210 1 242 346 51 0 chr10 80099244 80099322 -65489966 - MER91C DNA MER1_type -30 110 29 1977 131 25 0 chr10 80099706 80099988 -65489300 - AluSx SINE Alu -23 289 1 1780 181 7 3 chr10 80100484 80100782 -65488506 - AluJb SINE Alu -13 299 1 1776 121 24 97 chr10 80100883 80101222 -65488066 - AluYb8 SINE Alu 0 318 5 568 215 63 0 chr10 80101234 80101425 -65487863 - L1M4c LINE L1 -4180 2204 2002 2370 84 0 0 chr10 80101432 80101728 -65487560 - AluSc SINE Alu -13 296 1 1165 179 48 12 chr10 80101751 80102003 -65487285 - L1M4c LINE L1 -4513 1871 1611 204 125 0 0 chr10 80102015 80102047 -65487241 + (TA)n Simple_repeat Simple_repeat 1 32 0 1663 172 23 10 chr10 80105296 80105599 -65483689 + AluJo SINE Alu 1 307 -5 434 208 0 5 chr10 80106628 80106752 -65482536 + L1MEd LINE L1 938 1087 -5081 391 298 262 27 chr10 80106757 80106982 -65482306 + L3 LINE CR1 1295 1572 -5 2053 151 0 25 chr10 80106984 80107301 -65481987 + AluJo SINE Alu 1 309 -3 244 113 57 38 chr10 80107433 80107486 -65481802 + HAL1b LINE L1 1203 1256 -92 879 127 0 63 chr10 80107621 80107763 -65481525 + FLAM_C SINE Alu 1 133 0 1192 166 148 17 chr10 80107804 80108226 -65481062 - Charlie1b DNA MER1_type -45 478 1 34 0 0 0 chr10 80108735 80108769 -65480519 + AT_rich Low_complexity Low_complexity 1 34 0 663 162 94 0 chr10 80108773 80108890 -65480398 - FLAM_C SINE Alu -5 128 1 1098 207 42 0 chr10 80109312 80109525 -65479763 + MER58A DNA MER1_type 3 224 0 312 309 12 0 chr10 80109541 80109625 -65479663 - MIR3 SINE MIR -19 189 105 2024 113 3 67 chr10 80110242 80110571 -65478717 - AluSx SINE Alu -4 308 1 276 277 98 0 chr10 80110725 80110837 -65478451 - L1ME LINE L1 -399 5722 5600 2008 161 0 13 chr10 80111017 80111333 -65477955 + AluJb SINE Alu 1 312 0 1570 187 22 4 chr10 80111468 80111746 -65477542 - AluJo SINE Alu -29 283 1 519 271 52 10 chr10 80112148 80112340 -65476948 - L1ME1 LINE L1 -5 6161 5962 190 326 0 0 chr10 80113034 80113083 -65476205 + L2 LINE L2 2424 2472 -842 511 397 65 18 chr10 80113596 80113936 -65475352 + L2 LINE L2 2554 2909 -405 1696 170 3 27 chr10 80114024 80114324 -65474964 - AluJo SINE Alu -19 293 1 334 241 112 12 chr10 80114450 80114598 -65474690 + MLT1H LTR MaLR 370 528 -21 270 93 19 56 chr10 80114654 80114708 -65474580 - L1ME3A LINE L1 -227 5943 5892 * 1026 284 58 11 chr10 80114701 80115165 -65474123 - L1M4c LINE L1 -4700 1684 1199 236 149 0 21 chr10 80115170 80115217 -65474071 - Alu SINE Alu -10 290 245 539 273 84 25 chr10 80115431 80115669 -65473619 + AluJo SINE Alu 25 276 -36 391 325 17 33 chr10 80115962 80116246 -65473042 + GA-rich Low_complexity Low_complexity 1 279 0 2187 121 3 0 chr10 80116601 80116899 -65472389 + AluSx SINE Alu 1 299 -13 613 278 44 11 chr10 80116922 80117102 -65472186 + MER63A DNA MER1_type 6 191 -19 2102 129 0 0 chr10 80117292 80117579 -65471709 + AluSx SINE Alu 1 287 -25 2126 121 0 16 chr10 80118651 80118958 -65470330 + AluSq SINE Alu 1 302 -11 729 217 100 38 chr10 80120666 80120906 -65468382 + MIR SINE MIR 2 256 -6 1300 172 36 127 chr10 80120981 80121312 -65467976 - AluJo SINE Alu -1 301 1 372 340 106 14 chr10 80121799 80121940 -65467348 - L2 LINE L2 -4 3268 3115 218 246 87 43 chr10 80122239 80122308 -65466980 - L2 LINE L2 -556 2758 2687 307 253 38 0 chr10 80122308 80122387 -65466901 - L2 LINE L2 -5 3308 3227 1625 174 27 17 chr10 80122552 80122851 -65466437 - AluJo SINE Alu -10 302 1 189 107 0 0 chr10 80123002 80123030 -65466258 + (CA)n Simple_repeat Simple_repeat 2 29 0 1863 151 7 14 chr10 80123056 80123347 -65465941 + AluJo SINE Alu 1 289 -23 2958 73 80 9 chr10 80123679 80124102 -65465186 - MLT2A2 LTR ERVL 0 453 1 707 212 126 45 chr10 80124151 80124253 -65465035 - MIR SINE MIR -20 242 150 1671 203 0 10 chr10 80124253 80124554 -65464734 - AluJb SINE Alu -14 298 1 707 212 126 45 chr10 80124554 80124578 -65464710 - MIR SINE MIR -112 150 129 2054 136 27 0 chr10 80124578 80124872 -65464416 + AluJb SINE Alu 1 302 -10 2340 106 0 0 chr10 80124874 80125175 -65464113 + AluSg SINE Alu 1 301 -9 707 212 126 45 chr10 80125175 80125266 -65464022 - MIR SINE MIR -133 129 3 374 286 94 13 chr10 80125480 80125630 -65463658 + MIR SINE MIR 59 224 -38 202 309 41 72 chr10 80125979 80126076 -65463212 + L2 LINE L2 3134 3227 -45 243 347 41 47 chr10 80126224 80126394 -65462894 - MIR SINE MIR -73 189 21 * 1115 300 60 60 chr10 80126290 80126412 -65462876 + L2 LINE L2 2577 2697 -616 1850 172 0 0 chr10 80126412 80126702 -65462586 - AluJo SINE Alu -21 291 2 1115 300 60 60 chr10 80126702 80127069 -65462219 + L2 LINE L2 2697 3062 -251 1734 157 13 33 chr10 80127069 80127369 -65461919 + AluSx SINE Alu 1 294 -18 195 42 0 0 chr10 80127371 80127395 -65461893 + (TA)n Simple_repeat Simple_repeat 2 25 0 1115 300 60 60 chr10 80127395 80127559 -65461729 + L2 LINE L2 3062 3308 -5 767 259 104 40 chr10 80128213 80128665 -65460623 + L1MC4a LINE L1 5701 6181 -1627 2224 113 3 0 chr10 80128683 80128976 -65460312 + AluSx SINE Alu 1 294 -18 754 266 71 32 chr10 80128976 80129356 -65459932 + L1MC4 LINE L1 7644 8038 -4 1597 182 33 7 chr10 80129582 80129857 -65459431 + AluJo SINE Alu 1 282 -30 463 173 18 0 chr10 80129859 80129969 -65459319 + GA-rich Low_complexity Low_complexity 1 112 0 2286 113 7 0 chr10 80130953 80131253 -65458035 - AluSx SINE Alu -10 302 1 2010 133 7 13 chr10 80131653 80131955 -65457333 - AluSg SINE Alu -10 300 1 2134 114 14 0 chr10 80132579 80132868 -65456420 + AluSx SINE Alu 1 293 -19 1534 170 37 50 chr10 80132873 80133173 -65456115 + AluJo SINE Alu 1 296 -16 24 0 0 0 chr10 80133860 80133884 -65455404 + AT_rich Low_complexity Low_complexity 1 24 0 24 0 0 0 chr10 80135153 80135177 -65454111 + AT_rich Low_complexity Low_complexity 1 24 0 1241 133 0 0 chr10 80135355 80135536 -65453752 - AluSg/x SINE Alu -49 263 83 737 240 18 50 chr10 80136303 80136524 -65452764 - MER58C DNA MER1_type 0 215 2 891 257 19 16 chr10 80136842 80137099 -65452189 - MIR SINE MIR -3 259 2 1548 202 96 96 chr10 80137582 80138323 -65450965 - LTR1B LTR ERV1 -85 741 1 1291 159 0 5 chr10 80138472 80138661 -65450627 + AluSx SINE Alu 1 188 -124 233 111 44 0 chr10 80138666 80138711 -65450577 + L1 LINE L1 4972 5018 -1128 2087 129 0 0 chr10 80138720 80139007 -65450281 + AluSx SINE Alu 1 287 -25 186 71 0 0 chr10 80139007 80139035 -65450253 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 189 0 0 0 chr10 80139464 80139485 -65449803 + (TTAAA)n Simple_repeat Simple_repeat 2 22 0 2302 128 0 0 chr10 80140238 80140550 -65448738 - AluSx SINE Alu 0 312 1 1423 142 96 17 chr10 80140615 80140855 -65448433 - AluJo SINE Alu -30 282 24 1960 154 0 0 chr10 80141083 80141381 -65447907 + AluJb SINE Alu 1 298 -14 1744 159 0 41 chr10 80141966 80142281 -65447007 + AluJb SINE Alu 1 302 -10 573 216 7 22 chr10 80143040 80143179 -65446109 - MLT1H LTR MaLR 0 549 413 399 258 144 0 chr10 80143185 80143282 -65446006 - MIR SINE MIR -149 113 3 2109 125 13 0 chr10 80143800 80144103 -65445185 + AluSx SINE Alu 1 307 -5 2546 53 0 3 chr10 80144153 80144454 -65444834 + AluY SINE Alu 1 300 -11 309 303 43 65 chr10 80144458 80144689 -65444599 + L1ME4a LINE L1 5888 6113 -8 21 36 0 0 chr10 80145400 80145428 -65443860 + AT_rich Low_complexity Low_complexity 1 28 0 334 292 83 17 chr10 80145513 80145633 -65443655 - MIR3 SINE MIR -45 163 36 2132 114 7 20 chr10 80145684 80145990 -65443298 + AluSx SINE Alu 1 302 -10 2275 125 0 0 chr10 80146682 80146994 -65442294 - AluSx SINE Alu 0 312 1 22 0 0 0 chr10 80147067 80147089 -65442199 + AT_rich Low_complexity Low_complexity 1 22 0 1981 167 0 3 chr10 80148609 80148909 -65440379 + AluJb SINE Alu 1 299 -13 2230 103 3 3 chr10 80150071 80150381 -65438907 - AluY SINE Alu -1 310 1 973 191 169 31 chr10 80150431 80150750 -65438538 + MLT1A1 LTR MaLR 1 363 -2 2214 100 3 7 chr10 80150787 80151096 -65438192 - AluSc SINE Alu -1 308 1 652 211 58 13 chr10 80151096 80151252 -65438036 + MIR SINE MIR 99 261 -1 951 324 102 17 chr10 80151807 80152570 -65436718 + L2 LINE L2 2437 3313 0 1396 217 0 4 chr10 80152753 80153016 -65436272 + AluJb SINE Alu 1 262 -50 2310 65 11 0 chr10 80153095 80153408 -65435880 + AluY SINE Alu 5 320 0 731 196 184 0 chr10 80153999 80154157 -65435131 - MER5A DNA MER1_type -1 188 2 231 390 42 30 chr10 80154157 80154333 -65434955 + L2 LINE L2 2601 2782 -532 1831 172 0 3 chr10 80154333 80154623 -65434665 + AluJb SINE Alu 1 289 -23 231 390 42 30 chr10 80154623 80154676 -65434612 + L2 LINE L2 2782 2833 -481 230 344 248 14 chr10 80154788 80155006 -65434282 + L2 LINE L2 3004 3272 0 4161 154 27 34 chr10 80155995 80156317 -65432971 + L1MC2 LINE L1 5501 5824 -520 2380 115 0 0 chr10 80156317 80156630 -65432658 + AluSq SINE Alu 1 313 0 4161 154 27 34 chr10 80156630 80156730 -65432558 + L1MC2 LINE L1 5824 5923 -421 1686 148 119 0 chr10 80156730 80157041 -65432247 + MER7A DNA MER2_type 1 346 0 4161 154 27 34 chr10 80157041 80157465 -65431823 + L1MC2 LINE L1 5923 6342 -2 216 0 0 0 chr10 80158268 80158292 -65430996 + (T)n Simple_repeat Simple_repeat 1 24 0 766 154 7 29 chr10 80158390 80158526 -65430762 + FLAM_C SINE Alu 1 133 0 2056 151 0 3 chr10 80158598 80158902 -65430386 - AluJo SINE Alu -9 303 1 625 264 137 21 chr10 80158902 80159428 -65429860 - L1M4 LINE L1 -979 5167 4581 388 136 49 0 chr10 80159581 80159662 -65429626 + (TATG)n Simple_repeat Simple_repeat 2 86 0 383 38 19 0 chr10 80159726 80159779 -65429509 + (TG)n Simple_repeat Simple_repeat 1 54 0 1643 192 0 14 chr10 80159779 80160060 -65429228 - AluJb SINE Alu -35 277 1 2167 144 0 0 chr10 80160136 80160441 -65428847 - AluSx SINE Alu -7 305 1 2325 87 6 16 chr10 80160444 80160790 -65428498 - AluY SINE Alu 0 343 1 319 291 10 0 chr10 80160804 80160907 -65428381 + L1ME4a LINE L1 6018 6121 0 1439 152 9 0 chr10 80161377 80161588 -65427700 + AluJo SINE Alu 1 213 -99 1620 171 3 21 chr10 80162669 80162979 -65426309 - AluJb SINE Alu 0 305 1 1369 169 30 38 chr10 80163002 80163269 -65426019 - AluJb SINE Alu -47 265 1 180 0 0 0 chr10 80163269 80163289 -65425999 + (T)n Simple_repeat Simple_repeat 1 20 0 2009 111 29 0 chr10 80163516 80163795 -65425493 + AluSx SINE Alu 1 287 -25 2907 226 74 105 chr10 80163810 80164386 -65424902 + L1MC4 LINE L1 5282 5874 -2168 2229 83 0 0 chr10 80164386 80164663 -65424625 - AluSx SINE Alu -35 277 1 2907 226 74 105 chr10 80164663 80165783 -65423505 + L1MC4 LINE L1 5874 7027 -1015 1943 141 14 10 chr10 80165783 80166080 -65423208 + AluSx SINE Alu 1 298 -14 2907 226 74 105 chr10 80166080 80166311 -65422977 + L1MC4 LINE L1 7027 7264 -778 2221 103 14 0 chr10 80166311 80166602 -65422686 - AluSg SINE Alu -15 295 1 2907 226 74 105 chr10 80166602 80166632 -65422656 + L1MC4 LINE L1 7264 7293 -749 537 16 0 0 chr10 80166632 80166694 -65422594 + (TTCC)n Simple_repeat Simple_repeat 4 65 0 2907 226 74 105 chr10 80166694 80166712 -65422576 + L1MC4 LINE L1 7293 7310 -732 2246 121 7 0 chr10 80166712 80167017 -65422271 - AluSq SINE Alu -6 307 1 2907 226 74 105 chr10 80167017 80167321 -65421967 + L1MC4 LINE L1 7310 7622 -420 1815 154 6 29 chr10 80167321 80167632 -65421656 + AluJb SINE Alu 2 305 -7 2907 226 74 105 chr10 80167632 80168121 -65421167 + L1MC4 LINE L1 7622 8041 -1 1890 130 19 0 chr10 80168170 80168486 -65420802 + L1MB4 LINE L1 5859 6180 0 474 229 92 0 chr10 80169499 80169630 -65419658 - L1MA10 LINE L1 -2 6332 6190 1944 191 41 5 chr10 80169672 80170107 -65419181 - L1ME LINE L1 -424 5742 5292 1103 179 229 4 chr10 80170173 80170413 -65418875 + AluJb SINE Alu 2 295 -7 2149 237 70 6 chr10 80170429 80171096 -65418192 - L1ME LINE L1 -1029 5117 4408 1830 198 0 0 chr10 80171163 80171456 -65417832 - AluJb SINE Alu -19 293 1 281 26 0 0 chr10 80171532 80171570 -65417718 - AluSq/x SINE Alu -170 132 95 2369 97 0 0 chr10 80171601 80171901 -65417387 + AluSq SINE Alu 1 300 -13 1935 134 41 3 chr10 80172001 80172291 -65416997 + AluSg SINE Alu 1 301 -9 299 296 142 31 chr10 80173446 80173608 -65415680 + MIR SINE MIR 82 261 -1 1684 161 20 37 chr10 80173683 80173830 -65415458 + AluJo SINE Alu 1 142 -170 1972 142 17 10 chr10 80173830 80174125 -65415163 + AluSx SINE Alu 1 297 -15 1684 161 20 37 chr10 80174125 80174275 -65415013 + AluJo SINE Alu 142 293 -19 2234 227 77 38 chr10 80174345 80175242 -65414046 + L1ME2 LINE L1 4840 5841 -323 1713 185 13 7 chr10 80175242 80175550 -65413738 + AluJb SINE Alu 1 310 -2 2234 227 77 38 chr10 80175550 80175876 -65413412 + L1ME2 LINE L1 5841 6153 -11 1792 150 30 23 chr10 80175896 80176196 -65413092 + AluJb SINE Alu 1 302 -10 1841 153 7 7 chr10 80176344 80176632 -65412656 - AluSx SINE Alu -24 288 1 4868 154 22 46 chr10 80176633 80177453 -65411835 - L1MA7 LINE L1 -463 5828 4990 1598 165 0 8 chr10 80177453 80177702 -65411586 - AluJb SINE Alu -42 270 24 4868 154 22 46 chr10 80177702 80178114 -65411174 - L1MA7 LINE L1 -1301 4990 4646 1730 177 58 0 chr10 80178114 80178408 -65410880 + AluJb SINE Alu 1 311 -1 4868 154 22 46 chr10 80178408 80178758 -65410530 - L1MA7 LINE L1 -1645 4646 4289 360 0 0 0 chr10 80178868 80178908 -65410380 + (TG)n Simple_repeat Simple_repeat 2 41 0 2159 136 0 0 chr10 80178909 80179210 -65410078 - AluJb SINE Alu -11 301 1 2299 106 3 0 chr10 80179248 80179541 -65409747 + AluSx SINE Alu 1 294 -18 771 220 0 36 chr10 80179542 80179710 -65409578 - L1M4 LINE L1 -470 5708 5547 561 217 29 18 chr10 80179727 80179905 -65409383 - L1MA10 LINE L1 -3 6331 5987 2519 203 63 50 chr10 80180134 80180652 -65408636 - L1ME1 LINE L1 -191 6473 5942 2439 86 3 0 chr10 80180652 80180955 -65408333 - AluSq SINE Alu -9 304 1 2519 203 63 50 chr10 80180955 80181132 -65408156 - L1ME1 LINE L1 -722 5942 5769 259 202 20 0 chr10 80181193 80181292 -65407996 + (TA)n Simple_repeat Simple_repeat 2 102 0 1882 106 12 4 chr10 80181292 80181548 -65407740 - AluSx SINE Alu -25 287 30 927 189 35 20 chr10 80181550 80181804 -65407484 - L1ME1 LINE L1 -873 5771 5514 4553 164 66 32 chr10 80181809 80183080 -65406208 + L1MB4 LINE L1 4799 6124 -56 1893 59 141 0 chr10 80183080 80183335 -65405953 + AluY SINE Alu 1 291 -10 4553 164 66 32 chr10 80183335 80183390 -65405898 + L1MB4 LINE L1 6124 6176 -4 3538 191 13 29 chr10 80183399 80184090 -65405198 + L1MB8 LINE L1 5427 6106 -72 1561 161 60 23 chr10 80184090 80184389 -65404899 + AluJo SINE Alu 1 310 -2 3538 191 13 29 chr10 80184389 80184460 -65404828 + L1MB8 LINE L1 6106 6177 -1 1239 197 23 11 chr10 80184470 80184734 -65404554 - L1ME1 LINE L1 -1300 5344 5078 2332 160 62 5 chr10 80184734 80185135 -65404153 - MSTB LTR MaLR 0 426 3 9761 173 7 11 chr10 80185142 80186556 -65402732 - MSTB-int LTR MaLR -6 1645 239 2541 90 0 0 chr10 80186556 80186868 -65402420 - AluSx SINE Alu 0 312 1 9761 173 7 11 chr10 80186868 80187106 -65402182 - MSTB-int LTR MaLR -1412 239 1 271 191 0 0 chr10 80187136 80187183 -65402105 - MST-int LTR MaLR -991 660 614 68 0 0 0 chr10 80187183 80187251 -65402037 + AT_rich Low_complexity Low_complexity 1 68 0 2059 116 24 10 chr10 80187303 80187597 -65401691 + AluSx SINE Alu 1 298 -14 2177 160 35 50 chr10 80187612 80187728 -65401560 - MSTB LTR MaLR -31 395 279 2223 132 0 0 chr10 80187728 80188032 -65401256 - AluSx SINE Alu -8 304 1 2177 160 35 50 chr10 80188032 80188316 -65400972 - MSTB LTR MaLR -147 279 1 2809 193 41 31 chr10 80188318 80188394 -65400894 - L1ME1 LINE L1 -1564 5080 5006 1641 129 3 117 chr10 80188394 80188588 -65400700 - AluJb SINE Alu -12 290 146 252 0 0 0 chr10 80188588 80188616 -65400672 + (TA)n Simple_repeat Simple_repeat 2 29 0 1641 129 3 117 chr10 80188616 80188746 -65400542 - AluJb SINE Alu -156 146 3 2809 193 41 31 chr10 80188746 80189406 -65399882 - L1ME1 LINE L1 -1638 5006 4337 796 226 69 60 chr10 80189446 80189663 -65399625 - AluJo SINE Alu -92 220 2 375 221 0 0 chr10 80189667 80189735 -65399553 - L1ME1 LINE L1 -2304 4340 4273 207 0 0 0 chr10 80189735 80189758 -65399530 + (T)n Simple_repeat Simple_repeat 1 23 0 756 240 47 31 chr10 80189778 80190032 -65399256 - L1ME1 LINE L1 -2456 4188 3931 965 157 46 42 chr10 80190037 80190254 -65399034 - L1MB7 LINE L1 -17 6167 5950 951 257 73 48 chr10 80190254 80190489 -65398799 - L1ME1 LINE L1 -4239 2407 2179 2249 124 0 0 chr10 80190489 80190796 -65398492 - AluSx SINE Alu -5 307 1 951 257 73 48 chr10 80190796 80191030 -65398258 - L1ME1 LINE L1 -4467 2179 1821 * 5821 134 36 63 chr10 80191029 80191564 -65397724 - L1MC1 LINE L1 0 6333 5785 787 151 7 50 chr10 80191564 80191703 -65397585 - FLAM_C SINE Alu 0 133 1 5821 134 36 63 chr10 80191703 80192148 -65397140 - L1MC1 LINE L1 -548 5785 5387 2107 143 0 0 chr10 80192148 80192441 -65396847 - AluSx SINE Alu -19 293 1 5821 134 36 63 chr10 80192441 80192639 -65396649 - L1MC1 LINE L1 -946 5387 5185 2109 206 47 63 chr10 80192642 80193116 -65396172 - L1ME1 LINE L1 -4815 1831 1351 1733 131 79 0 chr10 80193116 80193383 -65395905 - AluSx SINE Alu -24 288 1 2109 206 47 63 chr10 80193383 80193497 -65395791 - L1ME1 LINE L1 -5295 1351 1237 2151 113 0 0 chr10 80193497 80193810 -65395478 - AluSx SINE Alu 0 313 1 2109 206 47 63 chr10 80193810 80193987 -65395301 - L1ME1 LINE L1 -5409 1237 1064 221 171 0 0 chr10 80194225 80194266 -65395022 - L2 LINE L2 -5 3308 3268 458 306 43 5 chr10 80194811 80194997 -65394291 + L1M3de LINE L1 1 193 -5698 7744 201 16 20 chr10 80195070 80196152 -65393136 + L1M3de LINE L1 -760 316 -5575 2383 103 0 0 chr10 80196152 80196464 -65392824 + AluSq SINE Alu 1 312 -1 7744 201 16 20 chr10 80196464 80196792 -65392496 + L1M3de LINE L1 316 644 -5247 761 182 0 78 chr10 80196792 80196946 -65392342 - FLAM_C SINE Alu 0 143 2 3763 222 84 36 chr10 80196946 80197342 -65391946 + L1M3de LINE L1 388 764 -5206 1751 163 3 18 chr10 80197342 80197665 -65391623 + AluJo SINE Alu 5 323 0 3763 222 84 36 chr10 80197665 80199062 -65390226 + L1M3de LINE L1 764 2184 -3786 2212 123 7 0 chr10 80199062 80199363 -65389925 - AluSx SINE Alu -9 303 1 3763 222 84 36 chr10 80199363 80199687 -65389601 + L1M3de LINE L1 2184 2491 -3479 1028 202 68 6 chr10 80199692 80200014 -65389274 + L1M3de LINE L1 2714 3055 -2915 2386 82 0 20 chr10 80200016 80200319 -65388969 - AluSp SINE Alu -16 297 1 44 0 0 0 chr10 80200319 80200363 -65388925 + AT_rich Low_complexity Low_complexity 1 44 0 1469 185 45 35 chr10 80200364 80200547 -65388741 - AluJo SINE Alu -23 289 100 2958 166 90 51 chr10 80200547 80201247 -65388041 - LTR8A LTR ERV1 0 727 1 1469 185 45 35 chr10 80201247 80201349 -65387939 - AluJo SINE Alu -212 100 1 29 28 0 0 chr10 80201349 80201385 -65387903 + AT_rich Low_complexity Low_complexity 1 36 0 1150 201 137 0 chr10 80201385 80201634 -65387654 - AluJo SINE Alu -19 283 1 1479 155 15 103 chr10 80201634 80201975 -65387313 - AluJb SINE Alu -1 311 1 1619 175 0 27 chr10 80201978 80202299 -65386989 - AluJb SINE Alu 0 313 1 2306 163 100 83 chr10 80202301 80202437 -65386851 + LTR8A LTR ERV1 140 272 -455 2238 110 0 0 chr10 80202437 80202728 -65386560 - AluSg SINE Alu -19 291 1 1629 191 7 13 chr10 80202730 80203033 -65386255 - AluJo SINE Alu -11 301 1 2161 131 7 0 chr10 80203039 80203337 -65385951 - AluSx SINE Alu -12 300 1 2306 163 100 83 chr10 80203337 80203768 -65385520 + LTR8A LTR ERV1 276 727 0 375 143 0 0 chr10 80203768 80203831 -65385457 - L1MA9 LINE L1 -69 6243 6181 2003 111 8 43 chr10 80203864 80204221 -65385067 - MER4A LTR ERV1 0 664 261 690 111 0 10 chr10 80204221 80204320 -65384968 - MER4A LTR ERV1 -566 98 1 10054 92 44 22 chr10 80204329 80205859 -65383429 - MER4A-int LTR ERV1 -2 6596 5033 1759 144 99 19 chr10 80205859 80205909 -65383379 + MER41C LTR ERV1 218 263 -291 2187 123 0 7 chr10 80205909 80206209 -65383079 + AluSg SINE Alu 1 298 -12 1759 144 99 19 chr10 80206209 80206470 -65382818 + MER41C LTR ERV1 263 554 0 257 135 365 14 chr10 80206472 80206546 -65382742 + MER41C-int LTR ERV1 3 102 -5844 3674 87 51 0 chr10 80206555 80207048 -65382240 + MER41C-int LTR ERV1 1 518 -7238 * 16219 92 40 27 chr10 80207043 80207561 -65381727 + MER41C-int LTR ERV1 647 1157 -6599 2352 109 0 0 chr10 80207561 80207863 -65381425 - AluSp SINE Alu -9 304 3 16219 92 40 27 chr10 80207863 80208706 -65380582 + MER41C-int LTR ERV1 1157 1987 -5769 3419 114 50 60 chr10 80208706 80209326 -65379962 + LTR18B LTR ERVL 1 614 0 16219 92 40 27 chr10 80209326 80210084 -65379204 + MER41C-int LTR ERV1 1987 2804 -4952 2511 69 0 7 chr10 80210084 80210390 -65378898 + AluSc SINE Alu 1 304 -5 16219 92 40 27 chr10 80210390 80210646 -65378642 + MER41C-int LTR ERV1 2804 3055 -4701 1719 70 0 54 chr10 80210641 80210696 -65378592 + MER41C-int LTR ERV1 4394 4450 -3306 * 2150 118 14 0 chr10 80210696 80211006 -65378282 + AluSq SINE Alu 1 313 0 1719 70 0 54 chr10 80211006 80211192 -65378096 + MER41C-int LTR ERV1 4450 4622 -3134 8415 72 30 19 chr10 80211196 80211957 -65377331 + MER41C-int LTR ERV1 5144 5924 -1832 2356 112 0 0 chr10 80211957 80212261 -65377027 + AluSq SINE Alu 1 304 -9 8415 72 30 19 chr10 80212261 80212613 -65376675 + MER41C-int LTR ERV1 5924 6270 -1486 1463 110 38 0 chr10 80212605 80212814 -65376474 + MER41C-int LTR ERV1 7540 7756 0 * 3340 126 86 0 chr10 80212814 80213324 -65375964 + MER41C LTR ERV1 1 554 0 2686 106 115 53 chr10 80213349 80213399 -65375889 - MER4A-int LTR ERV1 -5912 686 641 2228 127 0 9 chr10 80213399 80213714 -65375574 + AluSx SINE Alu 1 312 0 2686 106 115 53 chr10 80213714 80214231 -65375057 - MER4A-int LTR ERV1 -5957 641 1 1803 124 156 87 chr10 80214234 80214612 -65374676 - MER4A LTR ERV1 0 664 261 664 121 0 10 chr10 80214612 80214711 -65374577 - MER4A LTR ERV1 -566 98 1 341 211 0 0 chr10 80214711 80214768 -65374520 + MER21B LTR ERV1 26 82 -781 1048 171 0 0 chr10 80214774 80214938 -65374350 - FRAM SINE Alu -14 162 1 3432 167 124 34 chr10 80214947 80215658 -65373630 + MER21B LTR ERV1 89 863 0 561 162 45 65 chr10 80215662 80215816 -65373472 - L1MA9 LINE L1 -127 6185 6035 2154 104 0 7 chr10 80215841 80216129 -65373159 + AluSx SINE Alu 1 286 -26 2258 179 10 10 chr10 80216281 80216683 -65372605 - MER57A LTR ERV1 0 403 2 240 265 0 61 chr10 80216688 80216786 -65372502 - L2 LINE L2 0 3313 3222 1269 138 11 0 chr10 80216859 80217040 -65372248 + AluSx SINE Alu 1 183 -129 573 147 63 42 chr10 80217140 80217283 -65372005 - L1 LINE L1 -2712 3434 3289 1333 195 55 12 chr10 80217292 80217548 -65371740 - AluJo SINE Alu -45 267 1 2454 93 3 0 chr10 80217575 80217887 -65371401 - AluSp SINE Alu 0 313 1 278 154 0 19 chr10 80217889 80217941 -65371347 + MER113 DNA MER1_type? 135 185 -336 2925 114 19 7 chr10 80218174 80218603 -65370685 + MER57B LTR ERV1 1 434 0 2086 124 24 3 chr10 80218787 80219078 -65370210 - AluSx SINE Alu -15 297 1 1936 129 23 20 chr10 80219974 80220277 -65369011 + AluJo SINE Alu 1 304 -8 322 259 0 0 chr10 80221033 80221114 -65368174 - L2 LINE L2 -5 3308 3228 1651 203 0 3 chr10 80221757 80222062 -65367226 - AluJo SINE Alu -8 304 1 1139 262 41 25 chr10 80222203 80222566 -65366722 + MLT1I LTR MaLR 4 372 -37 584 247 54 92 chr10 80223173 80223542 -65365746 + L2 LINE L2 2949 3303 -10 2319 111 0 0 chr10 80223542 80223848 -65365440 + AluSq SINE Alu 1 306 -7 192 260 39 26 chr10 80223867 80223944 -65365344 - MER5B DNA MER1_type -100 78 1 2479 77 0 7 chr10 80224227 80224537 -65364751 - AluY SINE Alu -3 308 1 2111 127 3 0 chr10 80224779 80225071 -65364217 + AluSx SINE Alu 2 294 -18 234 0 0 0 chr10 80225117 80225143 -65364145 + (TA)n Simple_repeat Simple_repeat 1 26 0 1066 130 0 12 chr10 80225146 80225307 -65363981 - AluSg/x SINE Alu -17 295 137 201 74 0 0 chr10 80225357 80225384 -65363904 + (TAA)n Simple_repeat Simple_repeat 1 27 0 354 299 119 31 chr10 80225390 80225584 -65363704 - MIR SINE MIR -44 218 8 2337 80 10 10 chr10 80225623 80225925 -65363363 + AluSp SINE Alu 1 302 -11 437 280 164 22 chr10 80226012 80226151 -65363137 + MLT1J2 LTR MaLR 115 233 -217 2381 97 0 7 chr10 80226151 80226460 -65362828 + AluSx SINE Alu 1 307 -5 437 280 164 22 chr10 80226460 80226588 -65362700 + MLT1J2 LTR MaLR 233 420 -30 30 59 0 0 chr10 80226638 80226689 -65362599 + AT_rich Low_complexity Low_complexity 1 51 0 2569 92 25 3 chr10 80226689 80227048 -65362240 - L1PA11 LINE L1 -3 6171 5805 2324 100 3 0 chr10 80227229 80227529 -65361759 - AluSp SINE Alu -12 301 1 1558 154 30 30 chr10 80227539 80227556 -65361732 - AluJo SINE Alu 0 312 296 322 26 0 0 chr10 80227556 80227594 -65361694 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 1558 154 30 30 chr10 80227594 80227874 -65361414 - AluJo SINE Alu -15 297 1 2112 118 7 7 chr10 80227974 80228280 -65361008 + AluSq SINE Alu 1 306 -7 30 45 0 0 chr10 80228446 80228490 -65360798 + AT_rich Low_complexity Low_complexity 1 44 0 1393 69 0 0 chr10 80228501 80228674 -65360614 + AluSg/x SINE Alu 124 296 -16 1697 114 73 4 chr10 80228903 80229175 -65360113 - AluSx SINE Alu -21 291 1 2527 230 58 6 chr10 80229185 80229807 -65359481 - L1MC4 LINE L1 -142 7900 7213 1026 211 107 30 chr10 80229844 80229911 -65359377 - L1MC4 LINE L1 -1010 7032 6972 2004 124 3 0 chr10 80229911 80230201 -65359087 - AluSx SINE Alu -21 291 1 1026 211 107 30 chr10 80230201 80230431 -65358857 - L1MC4 LINE L1 -1070 6972 6712 279 170 0 0 chr10 80230432 80230479 -65358809 - L1MC4 LINE L1 -1528 6514 6468 2076 114 9 16 chr10 80230488 80230803 -65358485 - AluSp SINE Alu 0 313 1 2811 217 5 39 chr10 80230996 80231182 -65358106 + MER82 DNA MER2_type 1 192 -461 1631 165 16 19 chr10 80231182 80231491 -65357797 - AluJb SINE Alu -4 308 1 2811 217 5 39 chr10 80231491 80231890 -65357398 + MER82 DNA MER2_type 192 566 -87 1574 197 3 0 chr10 80231893 80232198 -65357090 + AluJo SINE Alu 1 306 -6 766 209 0 0 chr10 80232200 80232339 -65356949 + FLAM_C SINE Alu 5 143 0 733 218 53 18 chr10 80232543 80232713 -65356575 - MER63A DNA MER1_type -34 176 1 203 288 0 55 chr10 80233496 80233569 -65355719 - L2 LINE L2 0 3313 3245 275 247 25 49 chr10 80233952 80234033 -65355255 - L2 LINE L2 -531 2783 2705 846 250 25 33 chr10 80234307 80234551 -65354737 - MIR SINE MIR -16 246 5 462 278 97 113 chr10 80234588 80234792 -65354496 + L3 LINE CR1 460 666 -911 2074 123 3 0 chr10 80234792 80235093 -65354195 + AluSx SINE Alu 1 302 -10 462 278 97 113 chr10 80235093 80235411 -65353877 + L3 LINE CR1 666 975 -602 1989 89 4 0 chr10 80235411 80235680 -65353608 + AluSx SINE Alu 34 303 -9 462 278 97 113 chr10 80235680 80235713 -65353575 + L3 LINE CR1 975 1007 -570 267 350 73 50 chr10 80235716 80236033 -65353255 + L3 LINE CR1 1253 1576 -1 228 292 0 0 chr10 80236504 80236552 -65352736 + MIR SINE MIR 20 67 -195 882 114 0 29 chr10 80236557 80236697 -65352591 - AluJb SINE Alu -12 300 165 274 312 188 0 chr10 80236718 80236856 -65352432 + MIR SINE MIR 81 244 -18 618 152 10 0 chr10 80236915 80237014 -65352274 - FLAM_A SINE Alu -42 100 1 2145 89 4 0 chr10 80237021 80237330 -65351958 - AluSp SINE Alu 0 310 1 833 193 7 0 chr10 80237503 80237689 -65351599 - FRAM SINE Alu 0 194 8 708 302 144 3 chr10 80237803 80238171 -65351117 + L2 LINE L2 2886 3305 -8 239 318 79 16 chr10 80239399 80239525 -65349763 + L2 LINE L2 3138 3271 -1 283 315 117 0 chr10 80239528 80239639 -65349649 - MIR3 SINE MIR -2 206 83 1700 156 6 32 chr10 80239713 80240028 -65349260 + AluJb SINE Alu 1 307 -5 209 200 0 0 chr10 80240101 80240141 -65349147 + (TG)n Simple_repeat Simple_repeat 1 40 0 216 306 97 45 chr10 80240163 80240297 -65348991 - MIR3 SINE MIR -3 205 65 187 314 0 0 chr10 80240469 80240520 -65348768 + L2 LINE L2 3221 3271 -1 2182 93 0 29 chr10 80240601 80240913 -65348375 + AluSx SINE Alu 1 303 -9 631 288 21 21 chr10 80240926 80241159 -65348129 + MARNA DNA Mariner 61 293 -293 250 304 13 25 chr10 80241247 80241326 -65347962 - MIR SINE MIR -11 251 174 348 214 14 0 chr10 80241329 80241399 -65347889 + AluSq SINE Alu 129 199 -104 340 255 102 0 chr10 80241447 80241545 -65347743 - MIR SINE MIR -126 136 29 1655 139 0 29 chr10 80241587 80241868 -65347420 - AluJo SINE Alu -16 296 24 21 0 0 0 chr10 80241906 80241927 -65347361 + AT_rich Low_complexity Low_complexity 1 21 0 1269 144 0 0 chr10 80241930 80242125 -65347163 - AluSg/x SINE Alu -24 288 94 22 35 0 0 chr10 80242144 80242173 -65347115 + AT_rich Low_complexity Low_complexity 1 29 0 29 28 0 0 chr10 80242186 80242222 -65347066 + AT_rich Low_complexity Low_complexity 1 36 0 1216 200 92 8 chr10 80242223 80242483 -65346805 + AluJo SINE Alu 1 282 -30 408 264 57 14 chr10 80243606 80243746 -65345542 - MER117 DNA MER1_type -51 146 1 774 170 0 15 chr10 80244146 80244281 -65345007 + FLAM_C SINE Alu 1 133 0 1238 299 138 39 chr10 80244318 80244396 -65344892 - L1ME LINE L1 -700 5462 5393 1917 127 23 0 chr10 80244396 80244695 -65344593 + AluSx SINE Alu 1 306 -6 1238 299 138 39 chr10 80244695 80244811 -65344477 - L1ME LINE L1 -769 5393 5290 2052 117 0 7 chr10 80244811 80245119 -65344169 + AluSx SINE Alu 1 306 -6 1238 299 138 39 chr10 80245119 80245880 -65343408 - L1ME LINE L1 -872 5290 4412 272 250 0 22 chr10 80245923 80246015 -65343273 + (CATATA)n Simple_repeat Simple_repeat 4 93 0 225 259 99 0 chr10 80246017 80246098 -65343190 + L1MC4 LINE L1 6614 6702 -1340 181 206 16 16 chr10 80246101 80246164 -65343124 + (TATATG)n Simple_repeat Simple_repeat 3 65 0 433 206 54 11 chr10 80246255 80246347 -65342941 - L2 LINE L2 0 3313 3218 283 299 29 36 chr10 80246357 80246494 -65342794 - L1ME LINE L1 -2294 3852 3717 255 152 0 0 chr10 80246535 80246581 -65342707 + (TG)n Simple_repeat Simple_repeat 2 47 0 1852 159 0 0 chr10 80247319 80247614 -65341674 - AluSx SINE Alu -17 295 1 595 99 0 0 chr10 80247697 80247778 -65341510 - MLT1E1 LTR MaLR 0 654 574 622 202 124 0 chr10 80247781 80247910 -65341378 - AluSq/x SINE Alu -166 146 2 2467 206 49 8 chr10 80247911 80248441 -65340847 - MLT1E2 LTR MaLR -72 554 3 1526 129 33 99 chr10 80248485 80248818 -65340470 - AluJb SINE Alu -1 311 1 2000 96 44 3 chr10 80249285 80249578 -65339710 + AluSq SINE Alu 1 305 -8 342 0 0 0 chr10 80249599 80249637 -65339651 + (TG)n Simple_repeat Simple_repeat 1 38 0 938 169 0 0 chr10 80249770 80249930 -65339358 + AluJb SINE Alu 142 301 -11 318 313 140 62 chr10 80250043 80250114 -65339174 - MIR SINE MIR 0 262 198 2075 115 6 10 chr10 80250114 80250427 -65338861 - AluSx SINE Alu 0 312 1 318 313 140 62 chr10 80250427 80250598 -65338690 - MIR SINE MIR -64 198 1 217 306 22 45 chr10 80250615 80250749 -65338539 + GA-rich Low_complexity Low_complexity 1 131 0 1739 154 0 39 chr10 80250869 80251005 -65338283 + AluJb SINE Alu 1 141 -171 2320 58 3 23 chr10 80251005 80251314 -65337974 + AluY SINE Alu 1 303 -8 1739 154 0 39 chr10 80251314 80251482 -65337806 + AluJb SINE Alu 141 293 -19 969 211 31 16 chr10 80251483 80251739 -65337549 + L1MB7 LINE L1 5925 6184 0 983 98 13 7 chr10 80251741 80251894 -65337394 + L1MA5A LINE L1 6139 6292 -5 302 139 0 0 chr10 80251895 80251960 -65337328 - Alu SINE Alu 0 309 245 833 150 0 23 chr10 80251960 80252093 -65337195 - AluSq/x SINE Alu -165 147 18 529 158 0 0 chr10 80252109 80252185 -65337103 + AluJo SINE Alu 82 157 -155 1229 230 44 85 chr10 80252209 80252542 -65336746 + L1M4c LINE L1 1132 1477 -4907 2428 77 3 0 chr10 80252542 80252854 -65336434 + AluSp SINE Alu 1 313 0 1229 230 44 85 chr10 80252854 80252971 -65336317 + L1M4c LINE L1 1477 1597 -4787 1632 149 47 18 chr10 80252971 80253273 -65336015 + AluJb SINE Alu 1 310 0 2373 103 0 0 chr10 80253280 80253592 -65335696 + AluSx SINE Alu 1 312 0 1229 230 44 85 chr10 80253592 80253675 -65335613 + L1M4c LINE L1 1603 1653 -4731 713 167 0 58 chr10 80253681 80253819 -65335469 + FLAM_C SINE Alu 2 131 -2 1115 215 4 4 chr10 80253832 80254060 -65335228 + AluJo SINE Alu 9 236 -76 2711 153 20 2 chr10 80254071 80254530 -65334758 + L1MB3 LINE L1 5676 6142 -41 993 145 14 99 chr10 80254566 80254787 -65334501 + AluSg SINE Alu 1 202 -108 459 68 0 0 chr10 80254787 80254846 -65334442 + AluSq/x SINE Alu 74 132 -180 2292 82 0 3 chr10 80254848 80255151 -65334137 + AluSp SINE Alu 1 302 -11 1730 167 26 3 chr10 80255151 80255456 -65333832 + AluSx SINE Alu 1 312 0 337 74 56 0 chr10 80255480 80255534 -65333754 + L1MB4 LINE L1 6124 6180 0 955 229 85 27 chr10 80255595 80256246 -65333042 + L1M4c LINE L1 1742 2522 -3860 1706 171 0 30 chr10 80256247 80256545 -65332743 + AluJb SINE Alu 3 291 -21 371 133 61 72 chr10 80256756 80256878 -65332410 + (TTATA)n Simple_repeat Simple_repeat 1 122 -57 2130 100 3 0 chr10 80256878 80257169 -65332119 + AluSg SINE Alu 1 292 -18 371 133 61 72 chr10 80257169 80257227 -65332061 + (TTATA)n Simple_repeat Simple_repeat 122 179 0 2131 125 0 0 chr10 80257283 80257588 -65331700 + AluSx SINE Alu 1 305 -7 267 261 36 18 chr10 80257607 80257718 -65331570 - L1ME3A LINE L1 -214 5956 5844 225 264 0 19 chr10 80257726 80257779 -65331509 - L2 LINE L2 -54 3259 3208 414 181 149 0 chr10 80257947 80258041 -65331247 - L2 LINE L2 -505 2809 2702 339 306 95 13 chr10 80258052 80258284 -65331004 - L1MC4a LINE L1 -1969 5839 5589 310 289 11 0 chr10 80258335 80258425 -65330863 - L1MC4a LINE L1 -576 5588 5498 1791 92 0 4 chr10 80258427 80258667 -65330621 - AluSx SINE Alu -17 295 57 1832 125 3 17 chr10 80258667 80258956 -65330332 + AluSx SINE Alu 27 311 -1 232 69 0 0 chr10 80258956 80258985 -65330303 - Alu SINE Alu -265 37 9 292 231 54 8 chr10 80259014 80259144 -65330144 - L1MC4a LINE L1 -797 5445 5310 1183 148 14 49 chr10 80259165 80259388 -65329900 - AluSg/x SINE Alu -22 290 76 1895 113 41 10 chr10 80259407 80259698 -65329590 - AluSx SINE Alu -12 300 1 288 231 3 145 chr10 80259704 80259829 -65329459 - L1MC4a LINE L1 -855 5291 5226 2236 104 10 0 chr10 80259829 80260138 -65329150 - AluSx SINE Alu 0 312 1 288 231 3 145 chr10 80260138 80260294 -65328994 - L1MC4a LINE L1 -920 5226 5050 307 266 97 23 chr10 80260443 80260574 -65328714 - MER5A DNA MER1_type -5 173 25 363 240 93 54 chr10 80260901 80260965 -65328323 + MIR SINE MIR 90 150 -112 1650 192 0 7 chr10 80260965 80261272 -65328016 + AluJo SINE Alu 1 305 -7 363 240 93 54 chr10 80261272 80261336 -65327952 + MIR SINE MIR 150 223 -39 662 232 7 0 chr10 80261575 80261713 -65327575 - MIR SINE MIR -5 257 119 3963 154 14 10 chr10 80261916 80261964 -65327324 + L1MB3 LINE L1 5443 5489 -694 2081 101 0 14 chr10 80261964 80262286 -65327002 + AluSg SINE Alu 1 310 0 2268 84 0 0 chr10 80262288 80262610 -65326678 + AluSg SINE Alu 1 310 0 3963 154 14 10 chr10 80262610 80263251 -65326037 + L1MB3 LINE L1 5489 6138 -45 311 246 0 0 chr10 80263252 80263313 -65325975 + AluJ/FLAM SINE Alu 1 61 -241 853 153 14 0 chr10 80263336 80263480 -65325808 - AluSg/x SINE Alu -15 297 152 1462 126 18 0 chr10 80263587 80263809 -65325479 - AluSp SINE Alu -87 226 1 466 205 32 64 chr10 80263999 80264155 -65325133 - L1MC4 LINE L1 0 8042 7892 1173 140 0 0 chr10 80264176 80264354 -65324934 - AluSq SINE Alu -6 307 130 2137 100 13 0 chr10 80264358 80264657 -65324631 - AluSx SINE Alu -9 303 1 1600 214 44 20 chr10 80264674 80265081 -65324207 - L1MC4 LINE L1 -150 7892 7476 1884 140 0 23 chr10 80265081 80265381 -65323907 - AluSx SINE Alu -8 304 12 1900 135 7 3 chr10 80265398 80265695 -65323593 - AluSx SINE Alu -14 298 1 1053 165 0 0 chr10 80265713 80265877 -65323411 - AluJb SINE Alu -20 292 129 1969 98 11 0 chr10 80266656 80266957 -65322331 + AluSx SINE Alu 3 306 0 375 283 100 40 chr10 80267015 80267266 -65322022 + L1ME LINE L1 5333 5598 -523 2120 90 0 63 chr10 80267273 80267467 -65321821 - AluSq SINE Alu -2 311 145 2141 110 0 22 chr10 80267467 80267784 -65321504 - AluSg SINE Alu 0 310 1 2120 90 0 63 chr10 80267784 80267921 -65321367 - AluSq SINE Alu -168 145 1 799 192 11 28 chr10 80267933 80268110 -65321178 + AluJb SINE Alu 120 293 -19 2195 88 7 0 chr10 80268169 80268463 -65320825 - AluSp SINE Alu -17 296 1 2081 128 0 0 chr10 80268463 80268768 -65320520 - AluSx SINE Alu -7 305 1 2203 75 12 56 chr10 80268768 80269087 -65320201 + MER4E LTR ERV1 462 766 0 381 247 94 19 chr10 80269087 80269227 -65320061 + MIR SINE MIR 37 187 -61 180 0 0 0 chr10 80269228 80269248 -65320040 + (CAAAA)n Simple_repeat Simple_repeat 3 22 0 320 305 92 12 chr10 80269309 80269473 -65319815 + L1ME LINE L1 5614 5790 -331 315 188 0 31 chr10 80269486 80269550 -65319738 - L1MC4a LINE L1 -1883 5925 5864 616 266 91 37 chr10 80269551 80269792 -65319496 - L1MC4a LINE L1 -2138 5670 5417 2242 107 0 0 chr10 80269792 80270100 -65319188 - AluSq SINE Alu -5 308 1 2077 98 24 3 chr10 80270204 80270499 -65318789 - AluSx SINE Alu -11 301 1 854 117 0 29 chr10 80270540 80270677 -65318611 - FLAM_C SINE Alu 0 143 11 183 80 0 0 chr10 80271387 80271412 -65317876 + (GAAAA)n Simple_repeat Simple_repeat 2 26 0 2338 80 0 19 chr10 80271599 80271912 -65317376 - AluSp SINE Alu -6 307 1 44 0 0 0 chr10 80271912 80271956 -65317332 + AT_rich Low_complexity Low_complexity 1 44 0 1360 185 45 35 chr10 80271957 80272140 -65317148 - AluJo SINE Alu -23 289 100 2945 166 90 51 chr10 80272140 80272840 -65316448 - LTR8A LTR ERV1 0 727 1 1360 185 45 35 chr10 80272840 80272942 -65316346 - AluJo SINE Alu -212 100 1 29 28 0 0 chr10 80272942 80272978 -65316310 + AT_rich Low_complexity Low_complexity 1 36 0 1159 201 137 0 chr10 80272978 80273227 -65316061 - AluJo SINE Alu -19 283 1 1368 155 15 103 chr10 80273227 80273568 -65315720 - AluJb SINE Alu -1 311 1 1507 175 0 27 chr10 80273571 80273892 -65315396 - AluJb SINE Alu 0 313 1 2309 163 100 83 chr10 80273894 80274030 -65315258 + LTR8A LTR ERV1 140 272 -455 2114 110 0 0 chr10 80274030 80274321 -65314967 - AluSg SINE Alu -19 291 1 1528 191 7 13 chr10 80274323 80274627 -65314661 - AluJo SINE Alu -10 302 1 2036 131 7 0 chr10 80274633 80274931 -65314357 - AluSx SINE Alu -12 300 1 2309 163 100 83 chr10 80274931 80275362 -65313926 + LTR8A LTR ERV1 276 727 0 368 143 0 0 chr10 80275362 80275425 -65313863 - L1MA9 LINE L1 -69 6243 6181 2001 111 8 43 chr10 80275458 80275815 -65313473 - MER4A LTR ERV1 0 664 261 689 111 0 10 chr10 80275815 80275914 -65313374 - MER4A LTR ERV1 -566 98 1 9980 92 44 22 chr10 80275923 80277453 -65311835 - MER4A-int LTR ERV1 -2 6596 5033 1754 144 99 19 chr10 80277453 80277503 -65311785 + MER41C LTR ERV1 218 263 -291 2064 123 0 7 chr10 80277503 80277803 -65311485 + AluSg SINE Alu 1 298 -12 1754 144 99 19 chr10 80277803 80278064 -65311224 + MER41C LTR ERV1 263 554 0 262 135 365 14 chr10 80278066 80278140 -65311148 + MER41C-int LTR ERV1 3 102 -5844 3672 87 51 0 chr10 80278149 80278642 -65310646 + MER41C-int LTR ERV1 1 518 -7238 * 16219 92 40 27 chr10 80278637 80279155 -65310133 + MER41C-int LTR ERV1 647 1157 -6599 2352 109 0 0 chr10 80279155 80279457 -65309831 - AluSp SINE Alu -9 304 3 16219 92 40 27 chr10 80279457 80280300 -65308988 + MER41C-int LTR ERV1 1157 1987 -5769 3419 114 50 60 chr10 80280300 80280920 -65308368 + LTR18B LTR ERVL 1 614 0 16219 92 40 27 chr10 80280920 80281678 -65307610 + MER41C-int LTR ERV1 1987 2804 -4952 2511 69 0 7 chr10 80281678 80281984 -65307304 + AluSc SINE Alu 1 304 -5 16219 92 40 27 chr10 80281984 80282240 -65307048 + MER41C-int LTR ERV1 2804 3055 -4701 1734 66 0 54 chr10 80282235 80282290 -65306998 + PRIMA41-int LTR ERV1 4394 4450 -3306 * 2150 118 14 0 chr10 80282290 80282600 -65306688 + AluSq SINE Alu 1 313 0 1734 66 0 54 chr10 80282600 80282786 -65306502 + PRIMA41-int LTR ERV1 4450 4622 -3134 5822 80 14 12 chr10 80282790 80283551 -65305737 + PRIMA41-int LTR ERV1 5144 5906 -1850 2179 121 3 0 chr10 80283551 80283841 -65305447 + AluSx SINE Alu 1 291 -21 677 241 5 18 chr10 80283945 80284133 -65305155 + L1MC4 LINE L1 7213 7427 -615 748 209 0 0 chr10 80284235 80284374 -65304914 + AluSg/x SINE Alu 155 293 -17 2487 61 7 0 chr10 80284620 80284914 -65304374 - AluSg SINE Alu -14 296 1 1912 97 0 4 chr10 80284917 80285202 -65304086 - AluSp SINE Alu 0 324 41 2175 95 0 57 chr10 80285220 80285535 -65303753 - AluSx SINE Alu -15 297 1 1009 175 0 44 chr10 80285565 80285748 -65303540 - AluJ SINE Alu -18 294 120 24 0 0 0 chr10 80285760 80285784 -65303504 + AT_rich Low_complexity Low_complexity 1 24 0 668 203 8 8 chr10 80285784 80285917 -65303371 - AluJ SINE Alu -178 134 2 2196 128 0 0 chr10 80286219 80286515 -65302773 + AluSg SINE Alu 1 296 -14 304 149 0 0 chr10 80286548 80286595 -65302693 + AluJ/FLAM SINE Alu 47 93 -209 192 77 0 0 chr10 80286599 80286625 -65302663 + (A)n Simple_repeat Simple_repeat 1 26 0 2350 96 3 0 chr10 80286711 80287012 -65302276 + AluSx SINE Alu 1 302 -10 2252 104 7 0 chr10 80287037 80287334 -65301954 + AluSp SINE Alu 1 299 -14 1260 208 72 11 chr10 80287345 80287624 -65301664 + AluJo SINE Alu 1 296 -16 1464 184 11 42 chr10 80287630 80287913 -65301375 + AluJo SINE Alu 6 279 -33 883 93 33 33 chr10 80287923 80287935 -65301353 + L1PB1 LINE L1 5957 5968 -183 5404 118 3 31 chr10 80287935 80288672 -65300616 - L1MA4A LINE L1 -8 6295 5584 2166 109 3 42 chr10 80288672 80288839 -65300449 - AluSq SINE Alu -12 301 150 2449 75 3 0 chr10 80288839 80289132 -65300156 - AluSp SINE Alu -18 295 2 2166 109 3 42 chr10 80289132 80289277 -65300011 - AluSq SINE Alu -163 150 1 5404 118 3 31 chr10 80289277 80289398 -65299890 - L1MA4A LINE L1 -719 5584 5461 2558 64 0 16 chr10 80289398 80289712 -65299576 + AluY SINE Alu 1 309 -2 883 93 33 33 chr10 80289712 80289848 -65299440 + L1PB1 LINE L1 5966 6106 -45 216 0 0 0 chr10 80289848 80289872 -65299416 + (TAAA)n Simple_repeat Simple_repeat 4 27 0 349 260 0 0 chr10 80290104 80290181 -65299107 - L2 LINE L2 0 3313 3237 2122 130 0 31 chr10 80290391 80290713 -65298575 + AluSx SINE Alu 1 312 0 2397 94 3 0 chr10 80291111 80291408 -65297880 + AluSp SINE Alu 1 298 -15 1780 178 0 3 chr10 80291509 80291801 -65297487 - AluJo SINE Alu -17 295 5 334 86 241 0 chr10 80292053 80292111 -65297177 - AluJ/FLAM SINE Alu -210 92 21 1675 146 55 7 chr10 80292111 80292386 -65296902 + AluJb SINE Alu 22 309 -3 435 261 91 24 chr10 80292387 80292552 -65296736 - MER5B DNA MER1_type 0 178 3 288 278 57 68 chr10 80293654 80293830 -65295458 - MER5A DNA MER1_type 0 189 16 312 246 78 90 chr10 80296405 80296661 -65292627 - L1M2 LINE L1 -5841 1008 756 180 0 0 0 chr10 80296977 80296997 -65292291 + (CGGGA)n Simple_repeat Simple_repeat 1 20 0 961 125 21 0 chr10 80298606 80298750 -65290538 - MSTD LTR MaLR 0 396 250 2119 120 0 0 chr10 80298764 80299105 -65290183 + AluSx SINE Alu 1 341 0 2078 122 7 3 chr10 80299208 80299503 -65289785 + AluSx SINE Alu 1 296 -16 654 167 246 14 chr10 80299538 80299676 -65289612 + Tigger7 DNA MER2_type 1 170 -2317 561 102 111 28 chr10 80299681 80299789 -65289499 + Tigger7 DNA MER2_type 2209 2325 -162 994 168 54 0 chr10 80299790 80299957 -65289331 - AluJb SINE Alu -26 286 111 1200 127 0 21 chr10 80299958 80300147 -65289141 + Tigger7 DNA MER2_type 2383 2567 -20 586 214 212 84 chr10 80300166 80300558 -65288730 - MLT1J1 LTR MaLR -4 442 1 2267 108 37 0 chr10 80301320 80301617 -65287671 + AluSx SINE Alu 1 308 -4 2248 108 0 0 chr10 80301621 80301908 -65287380 + AluSg1 SINE Alu 4 290 -19 410 127 0 0 chr10 80302048 80302103 -65287185 + AluS SINE Alu 26 80 -232 1997 130 0 0 chr10 80302105 80302375 -65286913 - AluSx SINE Alu -30 282 13 1759 163 31 7 chr10 80302482 80302776 -65286512 + AluJb SINE Alu 1 301 -11 1777 174 0 26 chr10 80303010 80303321 -65285967 - AluJo SINE Alu -9 303 1 2202 181 59 30 chr10 80303429 80303920 -65285368 + MLT1D LTR MaLR 1 505 0 643 280 16 0 chr10 80303935 80304121 -65285167 + L1MC4 LINE L1 7261 7449 -593 929 185 0 0 chr10 80304133 80304284 -65285004 - AluSg/x SINE Alu -6 306 156 453 222 105 130 chr10 80304847 80304973 -65284315 + L1MC4 LINE L1 7553 7681 -361 2201 107 0 3 chr10 80304973 80305263 -65284025 + AluSx SINE Alu 1 289 -23 453 222 105 130 chr10 80305263 80305613 -65283675 + L1MC4 LINE L1 7681 8017 -25 2248 97 0 16 chr10 80307431 80307739 -65281549 + AluSg SINE Alu 1 303 -7 1964 151 7 16 chr10 80307766 80308071 -65281217 + AluJb SINE Alu 1 302 -10 1245 111 11 37 chr10 80308071 80308250 -65281038 + AluJb SINE Alu 130 305 -7 2401 88 3 0 chr10 80309729 80310026 -65279262 + AluSc SINE Alu 1 298 -11 1664 93 0 5 chr10 80310034 80310248 -65279040 + AluSg/x SINE Alu 84 296 -16 2268 40 0 0 chr10 80311165 80311418 -65277870 + AluY SINE Alu 44 296 -15 891 213 72 24 chr10 80311433 80311682 -65277606 + MIR SINE MIR 2 262 0 2099 103 3 27 chr10 80311761 80312062 -65277226 + AluSx SINE Alu 1 294 -18 2002 136 3 3 chr10 80312084 80312370 -65276918 + AluSx SINE Alu 5 290 -22 790 71 71 40 chr10 80312694 80312820 -65276468 + MER30 DNA MER1_type 1 130 -100 1033 128 0 0 chr10 80312820 80312999 -65276289 - AluSg/x SINE Alu 0 319 141 766 124 0 0 chr10 80313006 80313111 -65276177 + MER30 DNA MER1_type 126 230 0 2325 121 0 0 chr10 80313143 80313456 -65275832 + AluSq SINE Alu 1 313 0 2340 101 3 7 chr10 80313673 80313981 -65275307 - AluSp SINE Alu -6 307 1 29 37 0 19 chr10 80314602 80314625 -65274663 + AT_rich Low_complexity Low_complexity 1 23 -30 2211 124 3 3 chr10 80314625 80314931 -65274357 + AluSc SINE Alu 1 306 -3 29 37 0 19 chr10 80314931 80314961 -65274327 + AT_rich Low_complexity Low_complexity 23 53 0 2103 121 20 7 chr10 80315198 80315503 -65273785 + AluSg SINE Alu 1 309 -1 724 190 95 7 chr10 80315527 80315664 -65273624 - AluJb SINE Alu -77 235 87 2221 101 0 20 chr10 80318239 80318537 -65270751 + AluSg SINE Alu 1 292 -18 2464 77 0 3 chr10 80318598 80318898 -65270390 - AluSq SINE Alu -14 299 1 1067 298 145 38 chr10 80319245 80320080 -65269208 + L3 LINE CR1 638 1561 -16 247 326 139 21 chr10 80320442 80320586 -65268702 - MIR SINE MIR -71 191 31 2043 127 30 10 chr10 80320657 80320956 -65268332 + AluSx SINE Alu 1 305 -7 25 65 0 0 chr10 80321675 80321721 -65267567 + AT_rich Low_complexity Low_complexity 1 46 0 2236 111 0 0 chr10 80323251 80323540 -65265748 - AluSx SINE Alu -23 289 1 2354 96 0 0 chr10 80323572 80323865 -65265423 - AluSq SINE Alu -20 293 1 1919 148 0 7 chr10 80324301 80324598 -65264690 + AluJo SINE Alu 1 295 -17 2397 94 3 0 chr10 80324699 80324996 -65264292 - AluSp SINE Alu -15 298 1 2122 130 0 31 chr10 80325394 80325716 -65263572 - AluSx SINE Alu 0 312 1 349 260 0 0 chr10 80325926 80326003 -65263285 + L2 LINE L2 3237 3313 0 216 0 0 0 chr10 80326235 80326259 -65263029 + (TTTA)n Simple_repeat Simple_repeat 4 27 0 870 92 38 0 chr10 80326259 80326390 -65262898 - L1PB1 LINE L1 -45 6106 5971 2527 70 0 16 chr10 80326395 80326709 -65262579 - AluY SINE Alu -2 309 1 22 0 0 0 chr10 80326712 80326734 -65262554 + AT_rich Low_complexity Low_complexity 1 22 0 1127 113 0 6 chr10 80326901 80327061 -65262227 + AluSg/x SINE Alu 149 307 -5 213 235 37 37 chr10 80327787 80327868 -65261420 - L2 LINE L2 -4 3268 3188 2277 99 3 3 chr10 80328094 80328397 -65260891 - AluSc SINE Alu -6 303 1 1748 172 7 10 chr10 80328425 80328721 -65260567 - AluJo SINE Alu -17 295 1 322 238 275 16 chr10 80329482 80329675 -65259613 + MIR SINE MIR 20 262 0 1430 184 48 66 chr10 80329722 80330179 -65259109 - L1MB5 LINE L1 -8 6166 5718 243 316 7 33 chr10 80330216 80330368 -65258920 + CT-rich Low_complexity Low_complexity 5 152 0 1507 139 27 19 chr10 80330991 80331250 -65258038 - AluSq SINE Alu -51 262 2 643 78 11 0 chr10 80331921 80332011 -65257277 - L1PA6 LINE L1 0 6154 6064 380 286 146 16 chr10 80332230 80332415 -65256873 - MIR SINE MIR -7 255 47 1933 142 0 32 chr10 80332581 80332721 -65256567 + AluSx SINE Alu 1 144 -168 2431 68 7 0 chr10 80332721 80333016 -65256272 + AluSp SINE Alu 1 297 -16 1933 142 0 32 chr10 80333016 80333186 -65256102 + AluSx SINE Alu 144 301 -11 732 243 107 37 chr10 80333274 80333517 -65255771 - MIR SINE MIR 0 262 3 204 289 0 0 chr10 80334082 80334127 -65255161 - L3 LINE CR1 -9 1568 1524 665 245 26 7 chr10 80334257 80334412 -65254876 + MER5B DNA MER1_type 1 158 -20 230 256 0 0 chr10 80334557 80334600 -65254688 + MIR SINE MIR 29 71 -191 544 244 108 48 chr10 80334927 80335222 -65254066 - L1ME4a LINE L1 -11 6110 5798 621 252 100 33 chr10 80335225 80335575 -65253713 - L1P1 LINE L1 -375 5746 5385 530 207 108 98 chr10 80335622 80335927 -65253361 - HAL1 LINE L1 -96 2411 2104 1175 124 0 6 chr10 80335932 80336101 -65253187 - AluSc SINE Alu -10 299 132 1821 74 12 8 chr10 80336101 80336344 -65252944 - AluSx SINE Alu -6 306 63 359 100 0 0 chr10 80336350 80336400 -65252888 + MER2 DNA MER2_type 228 277 -68 892 159 0 32 chr10 80336421 80336578 -65252710 - AluSg/x SINE Alu -26 284 133 414 266 24 8 chr10 80336907 80337031 -65252257 + MIR SINE MIR 99 224 -38 2148 135 0 3 chr10 80337380 80337684 -65251604 - AluSx SINE Alu -9 303 1 1267 206 40 0 chr10 80337767 80337995 -65251293 - MER8 DNA MER2_type 0 239 3 690 205 35 116 chr10 80338011 80338382 -65250906 + L1MC4 LINE L1 7702 8042 0 1662 201 97 15 chr10 80338407 80338819 -65250469 + MER113 DNA MER1_type? 76 521 0 379 196 43 0 chr10 80339039 80339131 -65250157 + LTR54 LTR ERV1 402 497 -13 624 188 18 0 chr10 80340097 80340209 -65249079 - FLAM_A SINE Alu -1 141 28 533 327 46 6 chr10 80340584 80340825 -65248463 - MIR SINE MIR -7 255 8 1879 122 40 23 chr10 80341149 80341453 -65247835 - AluSx SINE Alu -3 309 1 258 179 146 89 chr10 80341547 80341670 -65247618 + L2 LINE L2 3117 3246 -67 1769 146 3 45 chr10 80341865 80342173 -65247115 + AluJb SINE Alu 1 295 -17 2202 99 10 0 chr10 80342450 80342744 -65246544 - AluSp SINE Alu -15 298 2 2201 100 0 26 chr10 80342745 80343054 -65246234 - AluSx SINE Alu -11 301 1 2265 130 0 0 chr10 80343054 80343361 -65245927 - AluSx SINE Alu -5 307 1 818 187 0 0 chr10 80343418 80343552 -65245736 + AluJo SINE Alu 1 134 -178 211 216 0 20 chr10 80343748 80343799 -65245489 + MIR SINE MIR 103 152 -110 183 317 0 0 chr10 80343970 80344011 -65245277 + L2 LINE L2 3210 3250 -22 278 338 124 20 chr10 80344048 80344249 -65245039 + L3 LINE CR1 1349 1570 -7 1586 199 0 7 chr10 80344250 80344546 -65244742 - AluJb SINE Alu -18 294 1 846 168 15 0 chr10 80344549 80344680 -65244608 - AluJo SINE Alu -176 136 4 875 216 254 6 chr10 80344706 80345040 -65244248 + L1MC4 LINE L1 7625 8041 -1 1682 164 0 15 chr10 80345049 80345317 -65243971 + AluJo SINE Alu 3 266 -46 279 0 0 0 chr10 80345319 80345350 -65243938 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 441 291 86 14 chr10 80345357 80345577 -65243711 - L2 LINE L2 -609 2705 2470 249 287 75 32 chr10 80345671 80345765 -65243523 - MIR SINE MIR -79 183 86 779 219 80 13 chr10 80345821 80346059 -65243229 - MER112 DNA MER1_type 0 256 3 216 0 0 0 chr10 80346239 80346263 -65243025 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 2124 99 3 7 chr10 80346266 80346549 -65242739 - AluSx SINE Alu -30 282 1 349 66 33 0 chr10 80346661 80346722 -65242566 + (TG)n Simple_repeat Simple_repeat 2 64 0 1484 149 32 24 chr10 80346726 80346974 -65242314 - L1MC1 LINE L1 -5 6328 6079 2077 130 37 0 chr10 80347335 80347634 -65241654 - AluSx SINE Alu -2 310 1 2312 110 3 0 chr10 80348500 80348809 -65240479 + AluSx SINE Alu 1 310 -2 521 129 0 0 chr10 80348860 80348930 -65240358 - AluSg/x SINE Alu -37 275 206 507 200 124 0 chr10 80349175 80349238 -65240050 - MLT1A1 LTR MaLR -202 163 109 1597 172 47 24 chr10 80349238 80349534 -65239754 - AluJb SINE Alu -9 303 1 507 200 124 0 chr10 80349534 80349615 -65239673 - MLT1A1 LTR MaLR -256 109 1 1876 125 14 7 chr10 80350724 80351054 -65238234 - AluSx SINE Alu 0 332 1 1054 277 72 9 chr10 80351555 80352026 -65237262 - L1 LINE L1 -1594 4552 4018 203 179 0 0 chr10 80352028 80352067 -65237221 + T-rich Low_complexity Low_complexity 1 39 0 31 0 0 0 chr10 80352407 80352438 -65236850 + AT_rich Low_complexity Low_complexity 1 31 0 2627 42 0 0 chr10 80353094 80353401 -65235887 - AluY SINE Alu -4 307 1 325 87 71 9 chr10 80353991 80354074 -65235214 - Alu SINE Alu -4 298 246 280 299 28 0 chr10 80354101 80354245 -65235043 + CT-rich Low_complexity Low_complexity 2 149 0 28 0 0 0 chr10 80355116 80355144 -65234144 + GC_rich Low_complexity Low_complexity 1 28 0 221 270 51 29 chr10 80355227 80355364 -65233924 + G-rich Low_complexity Low_complexity 4 143 0 1821 118 14 24 chr10 80355684 80355973 -65233315 - AluSx SINE Alu -26 286 1 712 142 31 55 chr10 80358576 80358703 -65230585 + FLAM_C SINE Alu 4 127 -16 222 149 14 81 chr10 80359449 80359523 -65229765 + (CCCCG)n Simple_repeat Simple_repeat 1 69 0 246 309 17 44 chr10 80360362 80360543 -65228745 + CT-rich Low_complexity Low_complexity 3 178 0 204 200 0 0 chr10 80361120 80361160 -65228128 + C-rich Low_complexity Low_complexity 3 42 0 428 264 92 60 chr10 80361732 80361982 -65227306 + MIR SINE MIR 5 262 0 758 224 11 17 chr10 80362287 80362461 -65226827 - L1ME LINE L1 -374 5788 5616 350 244 78 0 chr10 80362476 80362566 -65226722 - MER94 DNA DNA -34 100 4 992 228 104 59 chr10 80362568 80362768 -65226520 - L1ME LINE L1 -548 5622 5432 324 0 0 0 chr10 80362768 80362804 -65226484 + (TA)n Simple_repeat Simple_repeat 2 37 0 2331 105 0 3 chr10 80362811 80363125 -65226163 - AluSq SINE Alu 0 313 1 992 228 104 59 chr10 80363125 80363480 -65225808 - L1ME LINE L1 -743 5427 5029 457 330 33 23 chr10 80363733 80363948 -65225340 - MIR SINE MIR -6 256 40 737 169 0 8 chr10 80364380 80364498 -65224790 + FLAM_C SINE Alu 2 118 -15 365 169 0 0 chr10 80364535 80364600 -65224688 - AluSp/q SINE Alu 0 303 239 32 0 0 0 chr10 80365738 80365770 -65223518 + AT_rich Low_complexity Low_complexity 1 32 0 27 0 0 0 chr10 80365854 80365881 -65223407 + AT_rich Low_complexity Low_complexity 1 27 0 26 50 0 0 chr10 80366940 80366980 -65222308 + AT_rich Low_complexity Low_complexity 1 40 0 30 89 0 0 chr10 80367680 80367759 -65221529 + AT_rich Low_complexity Low_complexity 1 79 0 367 278 68 6 chr10 80369137 80369299 -65219989 - L1ME4a LINE L1 -4 6117 5946 499 156 11 44 chr10 80369972 80370062 -65219226 + FRAM SINE Alu 72 158 -18 2144 114 7 10 chr10 80371923 80372230 -65217058 + AluSx SINE Alu 1 306 -6 207 0 0 0 chr10 80372550 80372573 -65216715 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1549 141 107 15 chr10 80372699 80372962 -65216326 + AluSg SINE Alu 1 287 -23 216 0 0 0 chr10 80373127 80373151 -65216137 + (TAA)n Simple_repeat Simple_repeat 3 26 0 4769 165 41 8 chr10 80373163 80374111 -65215177 + L1MB2 LINE L1 5191 6170 -1 2184 116 3 0 chr10 80374131 80374433 -65214855 + AluSx SINE Alu 1 303 -9 2328 71 0 39 chr10 80374743 80375053 -65214235 + AluY SINE Alu 1 298 -13 894 181 29 12 chr10 80375054 80375225 -65214063 + MLT1D LTR MaLR 330 503 -2 330 326 127 67 chr10 80375308 80376538 -65212750 - L2 LINE L2 -58 3214 1867 233 364 66 40 chr10 80376794 80377190 -65212098 + L3 LINE CR1 97 502 -1075 1785 91 0 33 chr10 80377196 80377439 -65211849 - AluSp SINE Alu -24 289 55 2026 136 10 0 chr10 80378114 80378409 -65210879 - AluSx SINE Alu -14 298 1 316 177 13 76 chr10 80378796 80378851 -65210437 - MER116 DNA Mariner -1 79 29 2798 131 2 72 chr10 80378851 80378922 -65210366 - MSTC LTR MaLR -1 427 353 2138 98 37 3 chr10 80378922 80379219 -65210069 - AluSc SINE Alu -2 307 1 2798 131 2 72 chr10 80379219 80379606 -65209682 - MSTC LTR MaLR -75 353 1 316 177 13 76 chr10 80379606 80379629 -65209659 - MER116 DNA Mariner -51 29 6 2308 117 0 9 chr10 80379671 80379987 -65209301 + AluSq SINE Alu 1 313 0 2134 118 14 0 chr10 80381095 80381383 -65207905 - AluSx SINE Alu -20 292 1 786 214 13 0 chr10 80381608 80381762 -65207526 + MER97a DNA MER1_type? 1 156 -738 183 206 63 63 chr10 80381855 80381918 -65207370 - MIR3 SINE MIR -41 167 105 1537 168 152 0 chr10 80383028 80383331 -65205957 + MLT1E1 LTR MaLR 306 654 0 2007 214 79 4 chr10 80383736 80384169 -65205119 - MLT1E2 LTR MaLR -30 596 137 546 177 0 0 chr10 80384829 80384908 -65204380 + AluSx SINE Alu 2 80 -232 2012 122 11 0 chr10 80384910 80385189 -65204099 - AluSx SINE Alu -30 282 1 1786 94 4 4 chr10 80386328 80386563 -65202725 + AluSx SINE Alu 66 300 -10 192 304 123 29 chr10 80386580 80386718 -65202570 - L2 LINE L2 -222 3050 2900 288 254 51 121 chr10 80386758 80387068 -65202220 - MLT1J LTR MaLR -166 345 25 512 248 9 0 chr10 80387157 80387270 -65202018 + MER81 DNA DNA 1 114 0 1290 105 0 0 chr10 80387736 80387898 -65201390 + AluSq SINE Alu 1 162 -151 466 119 0 95 chr10 80387898 80387982 -65201306 + AluS SINE Alu 226 301 -8 2736 165 42 15 chr10 80387999 80388525 -65200763 - L1MB7 LINE L1 -22 6162 5623 2247 107 0 0 chr10 80388548 80388839 -65200449 - AluSx SINE Alu -21 291 1 1919 122 50 0 chr10 80388854 80389133 -65200155 - AluSx SINE Alu -19 293 1 215 255 0 0 chr10 80389269 80389320 -65199968 + MIR SINE MIR 157 207 -55 1658 185 0 11 chr10 80389592 80389879 -65199409 - AluJo SINE Alu -28 284 1 2101 119 3 3 chr10 80392498 80392791 -65196497 - AluSx SINE Alu -19 293 1 833 149 20 34 chr10 80392820 80392968 -65196320 + MER3 DNA MER1_type 1 146 -63 189 94 0 0 chr10 80392974 80393006 -65196282 + (TTAA)n Simple_repeat Simple_repeat 3 34 0 1296 126 117 52 chr10 80393008 80393239 -65196049 - AluJo SINE Alu -30 282 37 312 200 0 0 chr10 80393244 80393299 -65195989 + MER3 DNA MER1_type 155 209 0 296 200 0 0 chr10 80393257 80393307 -65195981 - MER3 DNA MER1_type -120 89 40 * 2387 84 0 3 chr10 80393656 80393955 -65195333 - AluSc SINE Alu -11 298 1 2282 107 10 0 chr10 80395258 80395549 -65193739 - AluSx SINE Alu -18 294 1 1278 199 76 4 chr10 80395650 80395926 -65193362 + AluJo SINE Alu 2 297 -15 646 230 114 36 chr10 80396173 80396618 -65192670 + L1MC/D LINE L1 5135 5608 -554 228 248 31 70 chr10 80396696 80396825 -65192463 + L1MC/D LINE L1 5759 5882 -1926 340 211 191 26 chr10 80396871 80397023 -65192265 + MER104 DNA MER2_type 3 179 -1 26 30 0 0 chr10 80397160 80397193 -65192095 + AT_rich Low_complexity Low_complexity 1 33 0 1687 132 8 0 chr10 80397965 80398208 -65191080 - AluSx SINE Alu -14 298 54 900 167 0 7 chr10 80398281 80398425 -65190863 + AluSq/x SINE Alu 1 143 -169 336 71 0 0 chr10 80398425 80398490 -65190798 + Alu SINE Alu 240 304 0 1862 153 0 0 chr10 80400010 80400292 -65188996 + AluJo SINE Alu 1 282 -30 1220 120 0 16 chr10 80401382 80401566 -65187722 - AluSp SINE Alu -1 312 132 2266 108 13 3 chr10 80402157 80402462 -65186826 - AluSx SINE Alu -4 308 1 1437 208 83 7 chr10 80402710 80402998 -65186290 - AluJo SINE Alu 0 312 3 207 0 0 0 chr10 80403188 80403211 -65186077 + (TATG)n Simple_repeat Simple_repeat 1 23 0 514 124 0 29 chr10 80403212 80403317 -65185971 + (TAGA)n Simple_repeat Simple_repeat 4 105 0 1769 156 52 25 chr10 80404125 80404452 -65184836 - MER44D DNA MER2_type -3 606 1 2215 110 3 3 chr10 80404798 80405106 -65184182 + AluSx SINE Alu 1 308 -4 1692 154 7 49 chr10 80405703 80406008 -65183280 + AluJo SINE Alu 1 292 -20 558 326 143 32 chr10 80406185 80406562 -65182726 + L2 LINE L2 2854 3272 0 2137 125 10 0 chr10 80406778 80407083 -65182205 + AluSg SINE Alu 1 308 -2 1759 155 0 10 chr10 80407713 80408004 -65181284 + AluJb SINE Alu 1 288 -24 1233 224 22 22 chr10 80408073 80408390 -65180898 - L1MC4a LINE L1 -3 7805 7489 190 313 0 81 chr10 80408390 80408489 -65180799 - L2 LINE L2 -11 3261 3171 416 277 42 17 chr10 80409089 80409208 -65180080 - L2 LINE L2 -4 3309 3188 2161 128 0 3 chr10 80409353 80409651 -65179637 + AluSq SINE Alu 1 297 -16 1939 132 3 17 chr10 80409829 80410116 -65179172 + AluSq SINE Alu 1 283 -30 437 265 167 38 chr10 80410201 80410292 -65178996 - L1MEd LINE L1 -4875 1244 1166 2124 118 0 13 chr10 80410292 80410597 -65178691 - AluSx SINE Alu -11 301 1 437 265 167 38 chr10 80410597 80410977 -65178311 - L1MEd LINE L1 -4953 1166 712 2278 112 3 0 chr10 80412002 80412307 -65176981 - AluSq SINE Alu -7 306 1 396 198 45 27 chr10 80413759 80413870 -65175418 - MER113 DNA MER1_type? -408 113 1 186 103 0 0 chr10 80414149 80414178 -65175110 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 1766 219 114 23 chr10 80414183 80415042 -65174246 - L2 LINE L2 -18 3295 2364 27 29 0 0 chr10 80415068 80415102 -65174186 + AT_rich Low_complexity Low_complexity 1 34 0 2141 101 27 7 chr10 80415937 80416235 -65173053 - AluSx SINE Alu -8 304 1 208 300 33 44 chr10 80416711 80416801 -65172487 - L2 LINE L2 0 3313 3225 2308 108 0 0 chr10 80417065 80417371 -65171917 + AluSx SINE Alu 1 306 -6 180 0 0 0 chr10 80418345 80418365 -65170923 + (T)n Simple_repeat Simple_repeat 1 20 0 21 0 0 0 chr10 80419419 80419440 -65169848 + AT_rich Low_complexity Low_complexity 1 21 0 2092 136 0 10 chr10 80420807 80421115 -65168173 - AluSx SINE Alu -7 305 1 23 0 0 0 chr10 80421557 80421580 -65167708 + AT_rich Low_complexity Low_complexity 1 23 0 2061 101 0 4 chr10 80422636 80422904 -65166384 - AluSx SINE Alu -45 267 1 762 272 70 58 chr10 80423116 80423359 -65165929 - MIR SINE MIR -8 254 9 2344 99 0 0 chr10 80424796 80425098 -65164190 + AluSx SINE Alu 1 302 -10 539 300 112 26 chr10 80425872 80426105 -65163183 + MIR SINE MIR 10 262 0 216 216 0 0 chr10 80426140 80426191 -65163097 + (CATATA)n Simple_repeat Simple_repeat 3 53 0 368 167 0 0 chr10 80426271 80426331 -65162957 - AluJo SINE Alu 0 301 242 946 142 12 37 chr10 80426331 80426493 -65162795 - AluJo SINE Alu -154 158 1 2349 86 0 7 chr10 80427011 80427312 -65161976 + AluSg SINE Alu 1 299 -11 181 175 333 24 chr10 80428546 80428672 -65160616 + MIR SINE MIR 88 252 -10 255 316 0 21 chr10 80428687 80428782 -65160506 + (CTA)n Simple_repeat Simple_repeat 2 94 0 634 178 9 9 chr10 80428893 80429000 -65160288 - FRAM SINE Alu -69 107 1 195 42 0 0 chr10 80429006 80429030 -65160258 + (TTG)n Simple_repeat Simple_repeat 2 25 0 540 218 167 26 chr10 80429058 80429214 -65160074 + MER5A DNA MER1_type 12 189 0 228 254 18 0 chr10 80429345 80429400 -65159888 + GA-rich Low_complexity Low_complexity 2 57 0 2237 123 0 0 chr10 80429625 80429927 -65159361 - AluSx SINE Alu -10 302 1 252 0 0 0 chr10 80429941 80429969 -65159319 + (CA)n Simple_repeat Simple_repeat 2 29 0 2238 108 13 0 chr10 80430283 80430589 -65158699 - AluSg SINE Alu 0 310 1 334 273 147 7 chr10 80430712 80430862 -65158426 + L1MC/D LINE L1 5594 5764 -2044 2292 109 0 0 chr10 80431160 80431464 -65157824 - AluSg SINE Alu -6 304 1 860 207 18 6 chr10 80431471 80431635 -65157653 - FRAM SINE Alu 0 166 1 383 317 35 21 chr10 80431807 80431952 -65157336 + MER5B DNA MER1_type 3 149 -29 1524 217 74 75 chr10 80432277 80432757 -65156531 + L1ME2 LINE L1 3191 3670 -2476 2076 113 23 26 chr10 80432757 80433066 -65156222 + AluSx SINE Alu 1 308 -4 1524 217 74 75 chr10 80433066 80433374 -65155914 + L1ME2 LINE L1 3670 3977 -2169 2368 97 3 0 chr10 80433374 80433683 -65155605 + AluSp SINE Alu 1 310 -3 1524 217 74 75 chr10 80433683 80434871 -65154417 + L1ME2 LINE L1 3977 5326 -820 949 307 38 38 chr10 80434871 80435295 -65153993 - LTR16A LTR ERVL 0 450 27 2690 174 104 42 chr10 80435319 80435419 -65153869 + L1ME2 LINE L1 5321 5413 -751 2553 49 3 0 chr10 80435419 80435724 -65153564 + AluY SINE Alu 1 306 -5 2690 174 104 42 chr10 80435724 80436351 -65152937 + L1ME2 LINE L1 5413 6103 -61 2038 101 49 0 chr10 80436351 80436637 -65152651 - AluSx SINE Alu -9 303 4 2690 174 104 42 chr10 80436637 80436694 -65152594 + L1ME2 LINE L1 6103 6155 -9 1307 240 46 19 chr10 80436758 80437233 -65152055 - L1M4 LINE L1 -2427 3719 3232 * 1565 222 91 37 chr10 80437229 80437769 -65151519 + L1ME2 LINE L1 5586 6154 -10 640 132 0 0 chr10 80437771 80437877 -65151411 + L1MB3 LINE L1 6078 6183 0 1913 114 43 11 chr10 80437901 80438182 -65151106 - AluSx SINE Alu -22 290 1 191 262 0 0 chr10 80438381 80438423 -65150865 - L2 LINE L2 0 3313 3272 239 0 32 0 chr10 80440310 80440341 -65148947 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 845 138 43 22 chr10 80441727 80441865 -65147423 + AluJb SINE Alu 1 141 -171 2224 110 0 19 chr10 80442004 80442321 -65146967 - AluSx SINE Alu 0 312 2 591 241 109 58 chr10 80442827 80442963 -65146325 - L2 LINE L2 -60 3253 3125 1643 167 7 7 chr10 80442963 80443257 -65146031 + AluJo SINE Alu 1 294 -18 591 241 109 58 chr10 80443257 80443394 -65145894 - L2 LINE L2 -188 3125 2966 2177 78 23 62 chr10 80443582 80443890 -65145398 - AluSq SINE Alu -17 296 1 239 206 56 84 chr10 80444287 80444394 -65144894 - MIR SINE MIR -50 212 109 208 185 19 56 chr10 80444891 80444945 -65144343 - MIR3 SINE MIR -2 206 155 1217 143 17 9 chr10 80445117 80445347 -65143941 + L1MB3 LINE L1 5900 6131 -52 243 279 333 6 chr10 80445383 80445566 -65143722 - L3 LINE CR1 -160 1417 1175 517 210 64 86 chr10 80445579 80445846 -65143442 - L1MC5 LINE L1 -378 7583 7323 1746 166 31 52 chr10 80445872 80446221 -65143067 + MER2 DNA MER2_type 3 344 0 569 208 50 174 chr10 80446356 80446799 -65142489 - L1MC4 LINE L1 -41 8001 7614 1235 164 10 10 chr10 80446823 80447030 -65142258 - AluJb SINE Alu -23 289 83 770 232 118 16 chr10 80447052 80447298 -65141990 - L1MC4 LINE L1 -473 7569 7299 445 257 106 22 chr10 80447467 80447646 -65141642 + MIR SINE MIR 7 200 -62 327 271 0 12 chr10 80449127 80449212 -65140076 - L2 LINE L2 0 3313 3230 2273 83 0 0 chr10 80449648 80449962 -65139326 + AluSc SINE Alu 1 314 0 2032 86 4 4 chr10 80450426 80450683 -65138605 + AluSc SINE Alu 28 284 -25 431 336 13 22 chr10 80451500 80451729 -65137559 + MIR SINE MIR 28 254 -8 2184 102 3 25 chr10 80454731 80455045 -65134243 + AluSq SINE Alu 1 307 -6 392 325 128 68 chr10 80455131 80456361 -65132927 + L2 LINE L2 1867 3214 -58 1812 232 71 65 chr10 80456444 80456616 -65132672 - MLT1E2 LTR MaLR -2 624 455 2144 64 0 36 chr10 80456616 80456896 -65132392 - AluY SINE Alu -13 298 29 1812 232 71 65 chr10 80456896 80457343 -65131945 - MLT1E2 LTR MaLR -171 455 1 1827 158 3 13 chr10 80457634 80457932 -65131356 + AluJb SINE Alu 1 295 -17 2334 83 0 13 chr10 80457934 80458235 -65131053 + AluY SINE Alu 1 297 -14 188 216 0 0 chr10 80458438 80458475 -65130813 - MIR3 SINE MIR -3 205 169 249 108 0 0 chr10 80461170 80461207 -65128081 + (TA)n Simple_repeat Simple_repeat 2 38 0 260 266 55 31 chr10 80461706 80461834 -65127454 - L1ME4a LINE L1 -205 5916 5786 235 246 14 0 chr10 80462047 80462116 -65127172 - L1ME4a LINE L1 -328 5793 5724 284 207 0 0 chr10 80462124 80462184 -65127104 - L1ME4a LINE L1 -458 5663 5602 246 200 43 14 chr10 80462266 80462336 -65126952 + HsTC2 DNA Tc2 1 72 -1826 392 300 115 30 chr10 80462357 80462557 -65126731 - L1ME4a LINE L1 -633 5488 5272 34 42 0 0 chr10 80462938 80462986 -65126302 + AT_rich Low_complexity Low_complexity 1 48 0 21 0 0 0 chr10 80464086 80464107 -65125181 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr10 80465978 80466000 -65123288 + AT_rich Low_complexity Low_complexity 1 22 0 770 171 0 16 chr10 80469217 80469346 -65119942 + 7SLRNA srpRNA srpRNA 181 307 -13 399 284 88 0 chr10 80469482 80469584 -65119704 - L2 LINE L2 -5 3308 3198 529 90 13 0 chr10 80469883 80469961 -65119327 - MADE1 DNA Mariner 0 80 2 2125 146 0 0 chr10 80470766 80471075 -65118213 + AluSx SINE Alu 1 309 -3 180 317 89 41 chr10 80471648 80471771 -65117517 - MIR SINE MIR -63 145 17 452 97 0 14 chr10 80472180 80472252 -65117036 + (TTCC)n Simple_repeat Simple_repeat 3 73 0 2151 140 7 0 chr10 80472255 80472563 -65116725 - AluSx SINE Alu -2 310 1 1071 168 10 14 chr10 80474053 80474262 -65115026 - MER20 DNA MER1_type -11 208 1 2188 82 0 4 chr10 80476654 80476969 -65112319 + AluSc SINE Alu 1 314 0 2219 77 17 7 chr10 80478043 80478330 -65110958 + AluSc SINE Alu 1 290 -19 2391 80 3 13 chr10 80480804 80481116 -65108172 + AluSc SINE Alu 1 309 0 23 86 0 0 chr10 80482113 80482171 -65107117 + AT_rich Low_complexity Low_complexity 1 58 0 228 352 91 30 chr10 80482692 80482891 -65106397 + L3b LINE CR1 1351 1561 -22 1486 173 91 29 chr10 80483195 80483537 -65105751 - MER47A DNA MER2_type -3 363 1 5513 212 88 58 chr10 80484159 80485390 -65103898 - L1MC4 LINE L1 -1 8041 6633 2023 103 3 69 chr10 80485390 80485710 -65103578 + AluSx SINE Alu 1 299 -13 5513 212 88 58 chr10 80485710 80486693 -65102595 - L1MC4 LINE L1 -1409 6633 5681 2500 61 0 3 chr10 80487382 80487679 -65101609 + AluSc SINE Alu 5 300 -9 663 159 0 0 chr10 80487979 80488086 -65101202 + FLAM_C SINE Alu 11 117 -26 233 254 0 30 chr10 80488086 80488153 -65101135 + CT-rich Low_complexity Low_complexity 1 65 0 440 272 162 21 chr10 80488233 80488424 -65100864 - MIR SINE MIR -8 254 37 234 273 122 52 chr10 80488498 80488670 -65100618 + L1ME3A LINE L1 5412 5595 -2213 28 29 0 0 chr10 80488681 80488716 -65100572 + AT_rich Low_complexity Low_complexity 1 35 0 2210 124 3 0 chr10 80488719 80489025 -65100263 + AluSx SINE Alu 1 307 -5 706 140 26 0 chr10 80489025 80489139 -65100149 - AluJo/FLAM SINE Alu -194 118 2 260 252 16 71 chr10 80489406 80489533 -65099755 + L1ME3A LINE L1 5709 5828 -293 1657 143 31 44 chr10 80489533 80489827 -65099461 + AluJo SINE Alu 1 290 -22 273 374 59 4 chr10 80490219 80490489 -65098799 - L2 LINE L2 -1034 2280 1996 403 287 127 6 chr10 80490509 80490666 -65098622 - MIR SINE MIR -1 261 86 2045 133 11 0 chr10 80490782 80491060 -65098228 + AluSx SINE Alu 1 281 -31 240 35 0 0 chr10 80491080 80491109 -65098179 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1923 163 14 36 chr10 80493342 80493698 -65095590 - MER7A DNA MER2_type 0 346 1 335 233 128 30 chr10 80493698 80493831 -65095457 + L2 LINE L2 3165 3310 -3 249 252 97 48 chr10 80495118 80495221 -65094067 + L2 LINE L2 3206 3313 0 200 314 128 0 chr10 80495361 80495447 -65093841 - L2 LINE L2 -6 3266 3170 1575 185 0 42 chr10 80495587 80495900 -65093388 - AluJo SINE Alu -8 304 5 2345 116 0 0 chr10 80496096 80496407 -65092881 - AluSx SINE Alu -1 311 1 221 0 35 0 chr10 80496451 80496480 -65092808 + (TTGG)n Simple_repeat Simple_repeat 2 31 0 1546 217 78 97 chr10 80497016 80497328 -65091960 + L1MC5 LINE L1 6805 7122 -839 1734 152 30 26 chr10 80497328 80497631 -65091657 - AluJo SINE Alu -8 304 1 1546 217 78 97 chr10 80497631 80497683 -65091605 + L1MC5 LINE L1 7122 7173 -788 2235 97 3 7 chr10 80497683 80497983 -65091305 + AluSx SINE Alu 10 308 -4 1546 217 78 97 chr10 80497983 80498337 -65090951 + L1MC5 LINE L1 7173 7510 -451 470 274 49 31 chr10 80498401 80498624 -65090664 + L1ME3A LINE L1 5927 6153 -17 186 200 75 0 chr10 80500234 80500274 -65089014 + MIR SINE MIR 212 254 -8 2198 93 17 7 chr10 80500613 80500902 -65088386 + AluSp SINE Alu 1 292 -21 21 0 0 0 chr10 80502157 80502178 -65087110 + AT_rich Low_complexity Low_complexity 1 21 0 353 173 27 13 chr10 80502948 80503023 -65086265 + MER5B DNA MER1_type 103 178 0 2072 138 7 0 chr10 80503055 80503352 -65085936 + AluJb SINE Alu 1 299 -13 921 238 42 12 chr10 80504547 80504787 -65084501 - MIR SINE MIR 0 262 16 1351 159 75 112 chr10 80504917 80505083 -65084205 + Charlie1b DNA MER1_type 52 223 -2538 939 112 0 15 chr10 80505083 80505217 -65084071 + FLAM_C SINE Alu 2 133 0 1351 159 75 112 chr10 80505217 80505477 -65083811 + Charlie1b DNA MER1_type 223 462 -61 307 164 0 0 chr10 80505552 80505607 -65083681 + MER5A DNA MER1_type 51 105 -84 756 192 57 40 chr10 80505871 80506048 -65083240 - MER5A DNA MER1_type -2 187 8 2597 63 3 0 chr10 80507749 80508052 -65081236 - AluSp SINE Alu -9 304 1 1814 131 65 0 chr10 80508240 80508530 -65080758 + AluSx SINE Alu 1 309 -3 585 152 0 0 chr10 80512956 80513061 -65076227 + GA-rich Low_complexity Low_complexity 1 105 0 2161 103 28 3 chr10 80513538 80513829 -65075459 + AluSq SINE Alu 1 298 -15 931 142 0 0 chr10 80514613 80514740 -65074548 + FLAM_C SINE Alu 1 127 -16 28 0 0 0 chr10 80514746 80514774 -65074514 + AT_rich Low_complexity Low_complexity 1 28 0 959 147 0 0 chr10 80515010 80515153 -65074135 + FLAM_C SINE Alu 1 143 0 253 268 61 85 chr10 80516437 80516601 -65072687 + MER104 DNA Tc2 5 164 -16 1031 169 0 0 chr10 80516632 80516786 -65072502 + AluJb SINE Alu 1 154 -158 1837 138 52 0 chr10 80516786 80517054 -65072234 + AluJb SINE Alu 20 301 -11 2311 97 0 10 chr10 80517743 80518042 -65071246 + AluSx SINE Alu 1 296 -16 285 297 0 0 chr10 80518458 80518559 -65070729 + (TA)n Simple_repeat Simple_repeat 1 101 0 405 206 0 0 chr10 80519764 80519856 -65069432 + GA-rich Low_complexity Low_complexity 1 92 0 21 0 0 0 chr10 80522059 80522080 -65067208 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr10 80522501 80522536 -65066752 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr10 80523395 80523418 -65065870 + AT_rich Low_complexity Low_complexity 1 23 0 278 312 64 7 chr10 80525249 80525410 -65063878 - MIR SINE MIR -55 153 20 497 302 187 27 chr10 80525642 80526262 -65063026 + L2 LINE L2 2068 2786 -528 184 243 84 47 chr10 80526372 80526479 -65062809 + L2 LINE L2 3035 3145 -168 187 355 0 0 chr10 80526499 80526561 -65062727 + L2 LINE L2 3252 3313 0 194 246 43 29 chr10 80529082 80529151 -65060137 + MIR SINE MIR 113 182 -80 204 230 20 10 chr10 80529567 80529667 -65059621 + GA-rich Low_complexity Low_complexity 4 104 0 642 73 0 0 chr10 80529727 80529809 -65059479 + AluSx SINE Alu 2 83 -230 1321 131 45 0 chr10 80530218 80530417 -65058871 + AluSx SINE Alu 87 294 -18 2135 114 17 3 chr10 80530787 80531084 -65058204 + AluSx SINE Alu 1 301 -11 300 287 0 0 chr10 80531597 80531705 -65057583 + MIR3 SINE MIR 65 172 -36 557 280 94 29 chr10 80532169 80532444 -65056844 + Charlie8 DNA MER1_type 1 293 -2124 185 283 19 0 chr10 80532977 80533030 -65056258 - L2 LINE L2 -9 3263 3210 * 378 348 179 5 chr10 80532993 80533177 -65056111 - MIR SINE MIR -20 242 27 300 102 0 0 chr10 80534623 80534672 -65054616 + (CGGGG)n Simple_repeat Simple_repeat 5 53 0 367 185 0 76 chr10 80535527 80535619 -65053669 - MER110A LTR ERV1 -304 164 80 678 265 213 22 chr10 80535883 80535964 -65053324 - L2 LINE L2 -2 3311 3247 1965 134 7 42 chr10 80535964 80536271 -65053017 + AluSx SINE Alu 1 296 -16 678 265 213 22 chr10 80536271 80536717 -65052571 - L2 LINE L2 -66 3247 2688 1886 150 16 22 chr10 80536717 80537031 -65052257 + AluJb SINE Alu 1 312 0 442 278 249 28 chr10 80538625 80539082 -65050206 - L1ME4a LINE L1 -7 6114 5557 2136 90 0 25 chr10 80539273 80539552 -65049736 - AluSx SINE Alu -3 309 38 337 226 75 103 chr10 80539930 80540076 -65049212 + L1ME4a LINE L1 5965 6106 -15 489 211 119 9 chr10 80541409 80541518 -65047770 - MIR3 SINE MIR -18 190 70 246 320 140 0 chr10 80542264 80542364 -65046924 - MIR SINE MIR -126 136 23 2518 62 3 3 chr10 80543190 80543496 -65045792 - AluY SINE Alu -5 306 1 1117 106 0 0 chr10 80543499 80543641 -65045647 - AluSq/x SINE Alu -170 142 1 711 299 75 7 chr10 80543761 80544042 -65045246 + MLT1I LTR MaLR 67 366 -43 721 222 123 19 chr10 80544280 80544507 -65044781 - MIR SINE MIR -1 261 15 274 333 0 0 chr10 80544595 80544685 -65044603 + MIR SINE MIR 46 135 -73 361 275 129 67 chr10 80544723 80544901 -65044387 + MIR SINE MIR 74 262 0 339 319 21 35 chr10 80544966 80545107 -65044181 - L2 LINE L2 -212 3060 2922 466 304 66 4 chr10 80545110 80545383 -65043905 + L1ME4a LINE L1 5594 5883 -238 465 267 74 0 chr10 80545571 80545706 -65043582 - MIR SINE MIR -1 261 117 1821 180 0 7 chr10 80545736 80546031 -65043257 - AluJo SINE Alu -19 293 1 357 332 36 66 chr10 80546037 80546233 -65043055 - L1ME LINE L1 -322 5799 5610 274 142 8 221 chr10 80546240 80546295 -65042993 - L1MD3 LINE L1 -13 7982 7967 1920 148 34 14 chr10 80546295 80546653 -65042635 + L1MB7 LINE L1 5806 6170 -14 274 142 8 221 chr10 80546653 80546724 -65042564 - L1MD3 LINE L1 -28 7967 7883 1446 199 20 24 chr10 80546803 80547100 -65042188 - AluJo SINE Alu -16 296 1 1779 136 95 4 chr10 80547134 80547407 -65041881 + AluSq SINE Alu 1 298 -15 1343 95 0 0 chr10 80547407 80547575 -65041713 + AluSg/x SINE Alu 132 299 -11 2090 121 13 22 chr10 80547883 80548197 -65041091 + AluSx SINE Alu 1 311 -1 926 223 55 31 chr10 80548267 80548528 -65040760 + MIR SINE MIR 1 261 -1 315 118 0 20 chr10 80548705 80548756 -65040532 + MLT1J LTR MaLR 85 134 -377 790 274 39 39 chr10 80548803 80549088 -65040200 + MLT1J LTR MaLR 224 508 -3 464 179 45 141 chr10 80550356 80550512 -65038776 - MIR SINE MIR -5 257 117 656 230 76 103 chr10 80550591 80550766 -65038522 + L1MC5 LINE L1 6810 6988 -973 2443 80 0 3 chr10 80550766 80551066 -65038222 + AluSq SINE Alu 1 299 -14 656 230 76 103 chr10 80551066 80551079 -65038209 + L1MC5 LINE L1 6988 7000 -961 1757 155 27 24 chr10 80551079 80551375 -65037913 + AluJb SINE Alu 3 299 -13 656 230 76 103 chr10 80551375 80551608 -65037680 + L1MC5 LINE L1 7000 7218 -743 244 303 49 27 chr10 80551742 80551927 -65037361 + L1MC5 LINE L1 7683 7871 -90 943 125 0 29 chr10 80551937 80552073 -65037215 - FLAM_C SINE Alu -1 132 1 376 290 181 7 chr10 80552326 80552481 -65036807 + MER5A DNA MER1_type 8 189 0 188 250 0 0 chr10 80552672 80552716 -65036572 + L2 LINE L2 3223 3266 -6 224 226 16 16 chr10 80552719 80552781 -65036507 + (TGAG)n Simple_repeat Simple_repeat 3 64 0 387 158 240 27 chr10 80554010 80554156 -65035132 - Charlie8 DNA MER1_type -2152 265 89 844 309 45 3 chr10 80554327 80554664 -65034624 + LTR16C LTR ERVL 138 488 -3 451 68 54 0 chr10 80554698 80554772 -65034516 + L1MA7 LINE L1 6214 6291 0 1783 133 30 56 chr10 80554942 80555117 -65034171 - AluJo SINE Alu -18 294 129 2449 92 0 0 chr10 80555117 80555422 -65033866 + AluSc SINE Alu 1 305 -4 1783 133 30 56 chr10 80555422 80555548 -65033740 - AluJo SINE Alu -183 129 1 1715 130 134 0 chr10 80556249 80556518 -65032770 - AluJo SINE Alu -7 305 1 1482 201 7 24 chr10 80556580 80556766 -65032522 - AluJo SINE Alu -12 300 119 269 0 56 0 chr10 80556766 80556802 -65032486 + (TTTTA)n Simple_repeat Simple_repeat 2 39 0 1482 201 7 24 chr10 80556802 80556909 -65032379 - AluJo SINE Alu -193 119 12 289 242 25 67 chr10 80557378 80557498 -65031790 + L1ME4a LINE L1 5989 6103 -18 406 170 148 89 chr10 80557781 80557835 -65031453 - MER69A DNA AcHobo -2349 177 128 2284 131 0 6 chr10 80557835 80558149 -65031139 - AluSx SINE Alu 0 312 1 406 170 148 89 chr10 80558149 80558229 -65031059 - MER69A DNA AcHobo -2398 128 35 319 196 0 0 chr10 80558637 80558693 -65030595 + AluJo/FLAM SINE Alu 70 125 -177 2137 124 0 0 chr10 80558694 80559002 -65030286 - AluSx SINE Alu 0 308 1 21 0 0 0 chr10 80559011 80559032 -65030256 + AT_rich Low_complexity Low_complexity 1 21 0 1837 151 3 20 chr10 80559078 80559376 -65029912 + AluJo SINE Alu 1 293 -19 2104 121 7 26 chr10 80560649 80560944 -65028344 + AluSx SINE Alu 1 291 -21 690 47 0 0 chr10 80560944 80561030 -65028258 + (GGAA)n Simple_repeat Simple_repeat 3 88 0 286 234 126 18 chr10 80561046 80561157 -65028131 - MIR SINE MIR -98 164 42 334 169 162 0 chr10 80561310 80561419 -65027869 + MIR SINE MIR 88 218 -44 480 231 91 59 chr10 80561977 80562198 -65027090 + MIR SINE MIR 8 235 -27 4488 120 58 46 chr10 80562558 80563334 -65025954 + LTR1 LTR ERV1 1 785 0 207 233 17 50 chr10 80565024 80565084 -65024204 + MIR SINE MIR 139 196 -66 649 95 0 0 chr10 80565112 80565207 -65024081 + AluJ/FRAM SINE Alu 217 311 -1 270 0 0 0 chr10 80565207 80565237 -65024051 + (TA)n Simple_repeat Simple_repeat 2 31 0 248 274 97 80 chr10 80565301 80565527 -65023761 - L3 LINE CR1 -237 1340 1111 260 259 35 112 chr10 80566236 80566406 -65022882 + L3 LINE CR1 1111 1267 -310 742 96 29 0 chr10 80566654 80566758 -65022530 + AluSq/x SINE Alu 2 108 -205 1124 108 0 62 chr10 80567545 80567721 -65021567 + AluSg/x SINE Alu 141 305 -7 2052 225 108 49 chr10 80567725 80568165 -65021123 + Zaphod DNA AcHobo 108 521 -3510 2211 98 52 0 chr10 80568165 80568451 -65020837 - AluSq SINE Alu -12 301 1 2052 225 108 49 chr10 80568451 80568564 -65020724 + Zaphod DNA AcHobo 521 626 -3405 1910 172 0 3 chr10 80568564 80568872 -65020416 - AluJo SINE Alu -5 307 1 2052 225 108 49 chr10 80568872 80569066 -65020222 + Zaphod DNA AcHobo 626 807 -3224 1806 147 46 29 chr10 80569066 80569373 -65019915 - AluSx SINE Alu 0 312 1 2052 225 108 49 chr10 80569373 80569455 -65019833 + Zaphod DNA AcHobo 807 988 -3043 459 193 0 0 chr10 80569455 80569543 -65019745 - MER33 DNA MER1_type 0 324 237 889 123 8 0 chr10 80569548 80569670 -65019618 + FLAM_A SINE Alu 18 140 -2 1033 163 37 49 chr10 80569728 80569765 -65019523 - MER33 DNA MER1_type -2343 242 206 2062 98 40 4 chr10 80569765 80570070 -65019218 + AluSp SINE Alu 1 315 0 1033 163 37 49 chr10 80570070 80570276 -65019012 - MER33 DNA MER1_type -2379 206 1 539 315 33 33 chr10 80570952 80571165 -65018123 + MIR SINE MIR 2 214 -48 1880 146 19 32 chr10 80571720 80571894 -65017394 - AluJo SINE Alu -7 305 135 261 0 0 0 chr10 80571894 80571923 -65017365 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1880 146 19 32 chr10 80571923 80572057 -65017231 - AluJo SINE Alu -177 135 1 373 209 22 0 chr10 80572272 80572363 -65016925 - LTR33 LTR ERVL -63 458 366 648 203 17 59 chr10 80572404 80572606 -65016682 + MLT1J LTR MaLR 263 440 -10 992 268 141 14 chr10 80572617 80572979 -65016309 - L2 LINE L2 -424 2890 2483 183 356 25 25 chr10 80573272 80573390 -65015898 - L2 LINE L2 -3 3310 3193 1609 160 48 61 chr10 80573543 80573856 -65015432 + AluJb SINE Alu 1 309 -3 2014 135 3 17 chr10 80574316 80574613 -65014675 - AluJb SINE Alu -19 293 1 613 161 89 0 chr10 80574614 80574738 -65014550 - MER53 DNA DNA -54 135 1 183 205 0 0 chr10 80575170 80575209 -65014079 + (TG)n Simple_repeat Simple_repeat 1 39 0 462 253 75 50 chr10 80575771 80576031 -65013257 - MIR SINE MIR -4 258 1 339 195 91 0 chr10 80576735 80576812 -65012476 - MLT1J LTR MaLR -5 506 423 1932 106 0 0 chr10 80576947 80577203 -65012085 - AluSx SINE Alu -13 299 44 713 225 42 28 chr10 80577206 80577419 -65011869 - MLT1J LTR MaLR -292 219 4 2556 174 28 2 chr10 80577427 80577899 -65011389 + MER31A LTR ERV1 2 485 0 1682 231 81 5 chr10 80579204 80579646 -65009642 - MLT1H1 LTR MaLR 0 555 80 624 270 79 0 chr10 80579660 80579838 -65009450 + MIR SINE MIR 13 204 -58 21 82 0 0 chr10 80579838 80579887 -65009401 + AT_rich Low_complexity Low_complexity 1 49 0 522 136 32 56 chr10 80580701 80580826 -65008462 + MLT1J2 LTR MaLR 21 142 -308 1814 151 32 0 chr10 80580906 80581190 -65008098 + AluJo SINE Alu 1 293 -19 223 284 157 10 chr10 80581307 80581409 -65007879 + MIR SINE MIR 75 191 -71 2208 140 0 0 chr10 80581532 80581840 -65007448 - AluSx SINE Alu -4 308 1 36 62 0 0 chr10 80581924 80581988 -65007300 + AT_rich Low_complexity Low_complexity 1 64 0 607 128 28 46 chr10 80582054 80582163 -65007125 - FRAM SINE Alu -13 163 57 200 327 0 0 chr10 80582217 80582272 -65007016 + L2 LINE L2 3201 3255 -17 1259 129 34 4 chr10 80582276 80582509 -65006779 - L1MD3 LINE L1 -8 7987 7748 955 116 23 0 chr10 80582510 80582639 -65006649 + AluSq/x SINE Alu 3 134 -179 2244 112 0 22 chr10 80582652 80582964 -65006324 + AluSx SINE Alu 2 306 -6 267 59 0 0 chr10 80582965 80582999 -65006289 - L1MD3 LINE L1 -231 7764 7731 880 133 0 22 chr10 80583131 80583266 -65006022 - FLAM_C SINE Alu -1 132 1 701 289 105 0 chr10 80583290 80583480 -65005808 - MIR SINE MIR -36 226 17 1783 173 7 20 chr10 80584315 80584616 -65004672 + AluJb SINE Alu 1 297 -15 471 225 28 70 chr10 80585889 80586031 -65003257 - MIR3 SINE MIR -72 136 1 2344 117 0 0 chr10 80586862 80587170 -65002118 + AluSx SINE Alu 1 308 -4 2058 167 0 0 chr10 80587184 80587489 -65001799 + AluJb SINE Alu 1 305 -7 848 213 18 0 chr10 80587489 80587653 -65001635 + AluJo/FRAM SINE Alu 134 300 -12 793 225 88 8 chr10 80587664 80587913 -65001375 + L1ME3A LINE L1 5694 5962 -208 2498 96 0 3 chr10 80588085 80588399 -65000889 - AluSq SINE Alu 0 313 1 2117 135 0 0 chr10 80589369 80589665 -64999623 + AluSx SINE Alu 1 296 -16 366 291 28 30 chr10 80589691 80589820 -64999468 - MIR SINE MIR -63 145 18 296 257 93 43 chr10 80590644 80590784 -64998504 + MIR3 SINE MIR 42 188 -20 315 271 106 8 chr10 80592060 80592225 -64997063 + MIR SINE MIR 35 250 -12 964 235 38 16 chr10 80592381 80592634 -64996654 - MIR SINE MIR -4 258 1 1753 108 115 4 chr10 80593084 80593362 -64995926 + AluSg1 SINE Alu 1 309 0 1634 158 0 76 chr10 80593415 80593560 -64995728 + AluJo SINE Alu 1 113 -199 2379 82 3 0 chr10 80593560 80593851 -64995437 + AluSp SINE Alu 1 292 -21 1634 158 0 76 chr10 80593851 80594008 -64995280 + AluJo SINE Alu 113 280 -32 184 342 26 0 chr10 80594081 80594157 -64995131 - MIR SINE MIR -99 109 32 348 287 79 0 chr10 80595223 80595324 -64993964 - MER91C DNA MER1_type 0 140 32 440 314 25 0 chr10 80596807 80596928 -64992360 + MIR SINE MIR 27 150 -58 968 118 0 15 chr10 80596996 80597131 -64992157 - FLAM_C SINE Alu 0 133 1 358 335 78 16 chr10 80597148 80597390 -64991898 + L2 LINE L2 2804 3060 -212 467 283 63 76 chr10 80597456 80597693 -64991595 + L2 LINE L2 3039 3272 0 391 223 53 106 chr10 80597703 80597891 -64991397 - MIR3 SINE MIR -15 193 16 2071 119 13 38 chr10 80597943 80598261 -64991027 + AluSq SINE Alu 1 310 -3 303 333 123 0 chr10 80598309 80598447 -64990841 + MIR3 SINE MIR 7 161 -47 2138 114 0 27 chr10 80598468 80598766 -64990522 - AluSx SINE Alu -22 290 1 473 225 155 0 chr10 80600255 80600384 -64988904 + MIR SINE MIR 95 243 -19 209 255 21 0 chr10 80600361 80600408 -64988880 + L2 LINE L2 3266 3313 0 * 1942 150 4 0 chr10 80600701 80601006 -64988282 - AluSx SINE Alu 0 306 1 209 327 161 28 chr10 80601572 80601713 -64987575 + MIR SINE MIR 4 125 -137 2303 76 14 0 chr10 80601713 80602002 -64987286 - AluSq SINE Alu -20 293 1 209 327 161 28 chr10 80602002 80602077 -64987211 + MIR SINE MIR 125 249 -13 212 151 0 19 chr10 80602453 80602506 -64986782 + C-rich Low_complexity Low_complexity 5 56 0 197 65 32 0 chr10 80604243 80604274 -64985014 + (TTTTC)n Simple_repeat Simple_repeat 3 34 0 544 139 156 82 chr10 80604276 80604398 -64984890 - FLAM_A SINE Alu -2 131 1 2058 129 20 10 chr10 80604943 80605238 -64984050 + AluSx SINE Alu 1 298 -14 186 43 0 0 chr10 80606108 80606131 -64983157 + (TTTTTG)n Simple_repeat Simple_repeat 3 25 0 2542 47 0 3 chr10 80606551 80606849 -64982439 + AluY SINE Alu 4 300 -11 22 0 0 0 chr10 80607098 80607120 -64982168 + AT_rich Low_complexity Low_complexity 1 22 0 1869 122 10 41 chr10 80607257 80607552 -64981736 - AluJo SINE Alu -11 301 16 1766 166 10 3 chr10 80607974 80608270 -64981018 - AluSx SINE Alu -14 298 1 2080 134 7 0 chr10 80608302 80608594 -64980694 + AluJo SINE Alu 1 294 -18 1998 125 0 7 chr10 80608598 80608870 -64980418 + AluSq SINE Alu 5 274 -39 180 0 0 0 chr10 80608878 80608898 -64980390 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 2212 127 3 0 chr10 80609524 80609823 -64979465 + AluSx SINE Alu 1 300 -12 2216 96 10 7 chr10 80610315 80610606 -64978682 - AluSp SINE Alu -9 304 13 2281 101 0 7 chr10 80610945 80611241 -64978047 + AluSx SINE Alu 1 294 -18 2563 65 7 0 chr10 80611422 80611730 -64977558 - AluY SINE Alu -1 310 1 2149 127 13 0 chr10 80611936 80612236 -64977052 - AluSx SINE Alu -6 306 3 888 267 50 0 chr10 80612254 80612475 -64976813 - MIR SINE MIR -14 248 17 340 192 64 0 chr10 80612527 80612605 -64976683 + MIR3 SINE MIR 106 188 -20 2314 110 7 0 chr10 80612852 80613152 -64976136 - AluSx SINE Alu -9 303 2 23 0 0 0 chr10 80613388 80613411 -64975877 + AT_rich Low_complexity Low_complexity 1 23 0 2111 126 3 7 chr10 80613491 80613792 -64975496 + AluSx SINE Alu 1 300 -12 556 102 76 85 chr10 80613797 80613915 -64975373 + FLAM_C SINE Alu 1 117 -16 1051 244 21 28 chr10 80613927 80614218 -64975070 - L1M4 LINE L1 -2157 3989 3701 537 16 0 0 chr10 80614312 80614374 -64974914 + (CACCC)n Simple_repeat Simple_repeat 4 65 0 2584 216 69 40 chr10 80614436 80614847 -64974441 - L1MDa LINE L1 -5820 720 279 1786 123 9 111 chr10 80614847 80615189 -64974099 - AluSx SINE Alu -5 307 1 2584 216 69 40 chr10 80615189 80615477 -64973811 - L1MDa LINE L1 -6261 279 1 2328 114 0 0 chr10 80615492 80615791 -64973497 + AluSx SINE Alu 1 299 -13 1254 175 147 79 chr10 80615956 80616248 -64973040 - AluJb SINE Alu 0 312 1 2125 143 0 10 chr10 80616492 80616799 -64972489 + AluJb SINE Alu 1 304 -8 189 74 0 0 chr10 80617258 80617285 -64972003 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 201 331 105 71 chr10 80617317 80617640 -64971648 + L2 LINE L2 2980 3313 0 1922 168 3 0 chr10 80617655 80617953 -64971335 - AluJo SINE Alu -4 308 10 270 186 71 86 chr10 80617963 80618033 -64971255 + L2 LINE L2 3199 3267 -5 2182 117 3 3 chr10 80618067 80618367 -64970921 + AluSx SINE Alu 1 300 -12 642 246 71 36 chr10 80618485 80618737 -64970551 + MIR SINE MIR 2 262 0 2348 103 13 7 chr10 80619224 80619534 -64969754 - AluSx SINE Alu 0 312 1 690 204 0 27 chr10 80619534 80619673 -64969615 - FLAM_C SINE Alu -175 137 1 314 188 0 0 chr10 80619724 80619793 -64969495 + L1ME3A LINE L1 5894 5962 -208 416 229 128 0 chr10 80620286 80620395 -64968893 - FRAM SINE Alu -2 174 52 2237 112 3 0 chr10 80620405 80620699 -64968589 - AluSc SINE Alu -14 295 1 279 304 168 14 chr10 80620979 80621265 -64968023 + L1MC4 LINE L1 7501 7830 -212 2483 66 0 13 chr10 80621381 80621682 -64967606 + AluSp SINE Alu 1 297 -16 29 28 0 0 chr10 80621846 80621882 -64967406 + AT_rich Low_complexity Low_complexity 1 36 0 783 237 84 5 chr10 80621913 80622103 -64967185 + MIR SINE MIR 47 251 -11 211 282 47 35 chr10 80622244 80622329 -64966959 + MIR SINE MIR 171 256 -6 22 70 0 0 chr10 80622622 80622665 -64966623 + AT_rich Low_complexity Low_complexity 1 43 0 21 57 0 0 chr10 80622821 80622856 -64966432 + AT_rich Low_complexity Low_complexity 1 35 0 576 274 17 62 chr10 80623021 80623200 -64966088 - MER5B DNA MER1_type -7 171 1 25 31 0 0 chr10 80623762 80623794 -64965494 + AT_rich Low_complexity Low_complexity 1 32 0 1892 176 0 0 chr10 80623878 80624174 -64965114 + AluJb SINE Alu 11 306 -6 3003 108 29 27 chr10 80624210 80624280 -64965008 + L1MA6 LINE L1 5534 5602 -698 1928 174 0 7 chr10 80624280 80624585 -64964703 + AluJb SINE Alu 1 303 -9 3003 108 29 27 chr10 80624585 80625030 -64964258 + L1MA6 LINE L1 5602 6050 -250 1971 52 0 0 chr10 80625028 80625278 -64964010 - L1PA11 LINE L1 -316 5858 5609 * 1666 104 4 0 chr10 80625278 80625509 -64963779 + L1PA10 LINE L1 5926 6157 -11 2237 102 0 14 chr10 80625514 80625808 -64963480 + AluSx SINE Alu 1 290 -22 1063 140 60 83 chr10 80625810 80625941 -64963347 + L1MA6 LINE L1 6041 6173 -127 1977 168 0 13 chr10 80625941 80626250 -64963038 + AluJo SINE Alu 6 310 -2 1063 140 60 83 chr10 80626250 80626332 -64962956 + L1MA6 LINE L1 6173 6249 -51 2496 70 3 3 chr10 80626332 80626631 -64962657 + AluSp SINE Alu 1 299 -14 1063 140 60 83 chr10 80626631 80626681 -64962607 + L1MA6 LINE L1 6249 6299 -1 2429 70 0 17 chr10 80626705 80627004 -64962284 + AluY SINE Alu 1 294 -17 237 217 0 0 chr10 80627069 80627115 -64962173 - L2 LINE L2 -3 3310 3265 183 100 0 0 chr10 80627217 80627247 -64962041 + (TTTTC)n Simple_repeat Simple_repeat 2 31 0 3759 189 45 20 chr10 80627883 80628419 -64960869 + L1MB4 LINE L1 5284 5852 -328 2506 88 0 0 chr10 80628419 80628724 -64960564 + AluSx SINE Alu 1 305 -7 3759 189 45 20 chr10 80628724 80629054 -64960234 + L1MB4 LINE L1 5852 6172 -8 2107 136 0 26 chr10 80630113 80630422 -64958866 - AluSq SINE Alu -4 309 9 382 251 148 5 chr10 80630566 80630769 -64958519 + L1ME4a LINE L1 5704 5935 -186 1443 209 98 0 chr10 80630974 80631332 -64957956 - L1M4 LINE L1 -996 5150 4758 1556 112 0 0 chr10 80631356 80631562 -64957726 - AluSx SINE Alu -102 210 5 547 251 69 40 chr10 80631663 80631838 -64957450 + MLT1E3 LTR MaLR 143 322 -302 271 163 0 0 chr10 80631835 80631884 -64957404 + MLT1E1 LTR MaLR 606 654 0 * 1591 211 71 35 chr10 80631927 80632223 -64957065 - L1M4 LINE L1 -1513 4633 4349 1908 156 3 34 chr10 80632223 80632543 -64956745 + AluJb SINE Alu 1 310 -2 1591 211 71 35 chr10 80632543 80632694 -64956594 - L1M4 LINE L1 -1797 4349 4161 2517 78 0 0 chr10 80632694 80633002 -64956286 - AluY SINE Alu -3 308 1 1591 211 71 35 chr10 80633002 80633088 -64956200 - L1M4 LINE L1 -1985 4161 4080 1960 128 78 0 chr10 80633127 80633409 -64955879 - AluSx SINE Alu -8 304 1 235 137 233 0 chr10 80633413 80633486 -64955802 - L1MEc LINE L1 -2991 3224 3135 461 150 125 42 chr10 80633510 80633604 -64955684 - L1MEc LINE L1 -4429 1967 1860 2450 69 7 0 chr10 80633604 80633894 -64955394 - AluSc SINE Alu -17 292 1 461 150 125 42 chr10 80633894 80633919 -64955369 - L1MEc LINE L1 -4536 1860 1838 385 106 182 0 chr10 80633919 80633985 -64955303 + AluS SINE Alu 1 78 -224 2193 110 3 0 chr10 80634188 80634480 -64954808 + AluSg SINE Alu 1 293 -17 1503 244 85 52 chr10 80634491 80635090 -64954198 - L1MEc LINE L1 -4558 1838 1260 2330 111 21 24 chr10 80635090 80635128 -64954160 - L1MB3 LINE L1 -10 6173 6136 2190 97 3 3 chr10 80635128 80635428 -64953860 - AluY SINE Alu -11 300 1 2330 111 21 24 chr10 80635428 80635767 -64953521 - L1MB3 LINE L1 -47 6136 5797 1503 244 85 52 chr10 80635767 80635812 -64953476 - L1MEc LINE L1 -5136 1260 1218 1765 161 3 7 chr10 80635812 80636097 -64953191 - AluJo SINE Alu -5 307 24 1503 244 85 52 chr10 80636097 80636276 -64953012 - L1MEc LINE L1 -5178 1218 987 591 136 29 0 chr10 80636300 80636403 -64952885 - FLAM_C SINE Alu -36 107 2 3357 210 61 52 chr10 80636403 80636775 -64952513 - L1MEc LINE L1 -5406 990 623 751 181 186 27 chr10 80636775 80636963 -64952325 - MER20 DNA MER1_type -1 218 1 3357 210 61 52 chr10 80636963 80637434 -64951854 - L1MEc LINE L1 -5773 623 135 2495 83 0 3 chr10 80637434 80637747 -64951541 - AluSp SINE Alu -1 312 1 3357 210 61 52 chr10 80637747 80637853 -64951435 - L1MEc LINE L1 -6261 135 31 2146 112 10 7 chr10 80638480 80638784 -64950504 - AluSg1 SINE Alu -4 305 1 27 49 0 0 chr10 80638995 80639036 -64950252 + AT_rich Low_complexity Low_complexity 1 41 0 2608 62 0 0 chr10 80639508 80639814 -64949474 - AluY SINE Alu -5 306 1 420 202 32 30 chr10 80640019 80640145 -64949143 - L1ME3A LINE L1 -3 6161 6042 21 0 0 0 chr10 80640892 80640913 -64948375 + AT_rich Low_complexity Low_complexity 1 21 0 210 191 0 0 chr10 80641193 80641235 -64948053 + (TG)n Simple_repeat Simple_repeat 2 43 0 1690 154 13 42 chr10 80641273 80641584 -64947704 - AluJb SINE Alu -10 302 1 213 23 47 47 chr10 80642479 80642522 -64946766 + (TTTAA)n Simple_repeat Simple_repeat 3 45 0 1656 181 14 17 chr10 80642522 80642809 -64946479 - AluJb SINE Alu -22 290 5 2181 103 0 7 chr10 80642860 80643150 -64946138 - AluSx SINE Alu -24 288 1 21 0 0 0 chr10 80643213 80643234 -64946054 + AT_rich Low_complexity Low_complexity 1 21 0 2899 13 0 0 chr10 80643402 80643713 -64945575 + AluYa5 SINE Alu 1 311 0 1710 160 3 48 chr10 80643732 80644026 -64945262 + AluJo SINE Alu 1 281 -31 2307 115 0 0 chr10 80644138 80644443 -64944845 - AluSx SINE Alu -7 305 1 2089 128 6 13 chr10 80644490 80644803 -64944485 + AluSx SINE Alu 2 312 0 634 244 37 118 chr10 80644869 80644927 -64944361 + HAL1 LINE L1 27 88 -2419 2098 114 47 7 chr10 80644927 80645225 -64944063 - AluSx SINE Alu 0 312 3 634 244 37 118 chr10 80645225 80645437 -64943851 + HAL1 LINE L1 88 275 -2232 1716 269 93 36 chr10 80645535 80646050 -64943238 - L2 LINE L2 -305 3008 2438 1745 191 3 0 chr10 80646050 80646349 -64942939 - AluJo SINE Alu -8 304 5 1716 269 93 36 chr10 80646349 80646568 -64942720 - L2 LINE L2 -875 2438 2233 639 243 86 38 chr10 80646591 80646801 -64942487 - L2 LINE L2 -1275 2039 1820 737 297 22 9 chr10 80646808 80647030 -64942258 + L1MC4 LINE L1 5638 5862 -1946 1873 156 4 0 chr10 80647090 80647366 -64941922 + AluJo SINE Alu 1 277 -35 1791 228 90 68 chr10 80647544 80648370 -64940918 + L1MC4 LINE L1 7198 8041 -1 210 71 0 0 chr10 80648390 80648418 -64940870 + (GA)n Simple_repeat Simple_repeat 1 28 0 1333 262 169 14 chr10 80648450 80649039 -64940249 - L2 LINE L2 -1630 1684 991 2461 86 3 0 chr10 80649039 80649342 -64939946 + AluSp SINE Alu 1 304 -9 1333 262 169 14 chr10 80649342 80649381 -64939907 - L2 LINE L2 -2323 991 959 2343 90 7 0 chr10 80649471 80649761 -64939527 + AluSx SINE Alu 1 292 -20 2638 152 43 2 chr10 80649767 80650207 -64939081 - L1MB7 LINE L1 -57 6127 5670 2160 139 3 3 chr10 80650209 80650519 -64938769 - AluSx SINE Alu -1 311 2 236 261 61 35 chr10 80650644 80650759 -64938529 + LTR16C LTR ERVL 2 119 -372 355 291 40 0 chr10 80650923 80651074 -64938214 + LTR16C LTR ERVL 318 474 -17 2404 56 0 33 chr10 80651365 80651667 -64937621 - AluY SINE Alu -19 292 1 1431 131 0 0 chr10 80652033 80652239 -64937049 + AluJb SINE Alu 87 292 -20 835 269 134 64 chr10 80652257 80652899 -64936389 + HAL1 LINE L1 420 1106 -1401 2072 117 3 52 chr10 80652900 80653226 -64936062 + AluSq SINE Alu 1 310 -3 1943 156 0 0 chr10 80653238 80653526 -64935762 + AluSx SINE Alu 1 288 -24 2440 73 7 0 chr10 80653530 80653832 -64935456 + AluSp SINE Alu 1 304 -9 449 239 218 29 chr10 80653834 80654077 -64935211 + HAL1 LINE L1 1795 2083 -424 2408 74 3 10 chr10 80654077 80654386 -64934902 - AluSg SINE Alu -3 307 1 335 180 180 50 chr10 80654409 80654548 -64934740 - L1ME4a LINE L1 0 6121 5965 264 149 0 0 chr10 80654548 80654595 -64934693 + (TTCC)n Simple_repeat Simple_repeat 4 50 0 1849 137 3 45 chr10 80654596 80654909 -64934379 - AluJb SINE Alu -12 300 1 242 163 23 0 chr10 80654909 80654952 -64934336 + CT-rich Low_complexity Low_complexity 3 46 0 1705 154 14 11 chr10 80655098 80655405 -64933883 + AluJb SINE Alu 1 308 0 1879 89 4 0 chr10 80656170 80656405 -64932883 + AluSp SINE Alu 1 236 -77 2530 64 0 3 chr10 80656550 80656848 -64932440 + AluY SINE Alu 1 297 -14 2104 142 0 3 chr10 80656855 80657164 -64932124 + AluJo SINE Alu 1 308 -4 314 170 38 0 chr10 80657307 80657360 -64931928 - MER66B LTR ERV1 -140 346 292 22 0 0 0 chr10 80657364 80657386 -64931902 + AT_rich Low_complexity Low_complexity 1 22 0 332 229 72 0 chr10 80658034 80658117 -64931171 + MER5A DNA MER1_type 2 90 -99 1260 199 131 15 chr10 80658420 80658687 -64930601 - AluJo SINE Alu -14 298 1 1824 192 3 0 chr10 80658746 80659054 -64930234 - AluJo SINE Alu -3 309 1 1301 94 0 0 chr10 80659161 80659321 -64929967 - AluSp SINE Alu -16 297 138 795 170 50 13 chr10 80659397 80659556 -64929732 - MER3 DNA MER1_type -44 165 1 2543 76 0 0 chr10 80660052 80660355 -64928933 + AluSg1 SINE Alu 1 303 -6 2215 82 14 7 chr10 80660366 80660676 -64928612 + AluSg1 SINE Alu 1 312 0 2057 117 23 7 chr10 80660793 80661101 -64928187 + AluSq SINE Alu 1 313 0 262 289 56 74 chr10 80661743 80661922 -64927366 - L1ME4a LINE L1 -2 6119 5938 2108 100 43 10 chr10 80661922 80662222 -64927066 - AluSx SINE Alu -2 310 1 262 289 56 74 chr10 80662222 80662316 -64926972 - L1ME4a LINE L1 -183 5938 5844 2603 67 0 3 chr10 80662316 80662628 -64926660 - AluY SINE Alu 0 311 1 262 289 56 74 chr10 80662628 80662904 -64926384 - L1ME4a LINE L1 -277 5844 5588 2347 97 0 3 chr10 80662904 80663203 -64926085 + AluSx SINE Alu 1 298 -14 262 289 56 74 chr10 80663203 80663300 -64925988 - L1ME4a LINE L1 -533 5588 5491 21 57 0 0 chr10 80663343 80663378 -64925910 + AT_rich Low_complexity Low_complexity 1 35 0 1595 191 0 30 chr10 80663504 80663663 -64925625 - AluJo SINE Alu -23 289 142 2172 116 0 0 chr10 80663663 80663957 -64925331 - AluSg SINE Alu -16 294 1 1595 191 0 30 chr10 80663957 80664095 -64925193 - AluJo SINE Alu -170 142 1 622 234 184 5 chr10 80664991 80665192 -64924096 + MIR SINE MIR 18 254 -8 25 51 0 0 chr10 80665206 80665245 -64924043 + AT_rich Low_complexity Low_complexity 1 39 0 2378 68 0 50 chr10 80665268 80665590 -64923698 - AluY SINE Alu -5 306 1 2327 103 7 0 chr10 80665592 80665893 -64923395 - AluSp SINE Alu -9 304 2 1275 241 27 97 chr10 80665993 80666508 -64922780 - MLT1J LTR MaLR -6 505 27 258 32 0 0 chr10 80666674 80666705 -64922583 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2258 107 0 0 chr10 80666721 80667010 -64922278 - AluSx SINE Alu -23 289 1 837 211 19 0 chr10 80669744 80669905 -64919383 + FAM SINE Alu 1 164 -11 2065 135 0 0 chr10 80669908 80670218 -64919070 + AluSx SINE Alu 1 310 0 1662 160 4 21 chr10 80670225 80670506 -64918782 + AluJb SINE Alu 5 280 -32 189 0 0 0 chr10 80670506 80670527 -64918761 + (CAAT)n Simple_repeat Simple_repeat 4 24 0 189 107 0 0 chr10 80671167 80671195 -64918093 + (T)n Simple_repeat Simple_repeat 1 28 0 2213 90 0 21 chr10 80671462 80671752 -64917536 + AluSg SINE Alu 19 302 -8 2269 107 0 0 chr10 80673371 80673661 -64915627 + AluJb SINE Alu 1 290 -22 2323 112 3 0 chr10 80674322 80674627 -64914661 - AluSp SINE Alu -7 306 1 201 74 0 0 chr10 80674681 80674708 -64914580 + (CATATA)n Simple_repeat Simple_repeat 1 27 0 1007 181 112 12 chr10 80674745 80674994 -64914294 - MER90 LTR ERV1 -3 611 338 1662 88 0 0 chr10 80674994 80675198 -64914090 + AluSc SINE Alu 1 204 -105 2297 111 3 0 chr10 80675255 80675562 -64913726 - AluSq SINE Alu -5 308 1 2103 80 29 0 chr10 80675765 80676041 -64913247 + AluSx SINE Alu 16 299 -13 779 181 0 8 chr10 80676206 80676339 -64912949 - FLAM_C SINE Alu -1 132 1 475 234 105 0 chr10 80676686 80676810 -64912478 - L2 LINE L2 -8 3305 3169 1143 214 187 62 chr10 80676852 80677278 -64912010 + MER90 LTR ERV1 70 564 -50 2034 142 10 3 chr10 80677278 80677580 -64911708 + AluSx SINE Alu 1 304 -8 1143 214 187 62 chr10 80677580 80677635 -64911653 + MER90 LTR ERV1 564 611 -3 480 268 112 63 chr10 80677654 80677906 -64911382 - L2 LINE L2 -183 3130 2848 2397 90 0 3 chr10 80677906 80678205 -64911083 + AluSx SINE Alu 1 298 -14 480 268 112 63 chr10 80678205 80678340 -64910948 - L2 LINE L2 -465 2848 2721 2510 48 37 0 chr10 80678618 80678913 -64910375 - AluY SINE Alu -5 306 1 22 0 0 0 chr10 80678942 80678964 -64910324 + AT_rich Low_complexity Low_complexity 1 22 0 390 212 246 0 chr10 80679108 80679226 -64910062 - MER5A DNA MER1_type -16 173 27 421 226 28 123 chr10 80679475 80679525 -64909763 - L1M4 LINE L1 -1780 4366 4313 2033 140 3 7 chr10 80679525 80679832 -64909456 - AluSx SINE Alu -6 306 1 421 226 28 123 chr10 80679832 80679993 -64909295 - L1M4 LINE L1 -1833 4313 4175 185 257 29 29 chr10 80680962 80681032 -64908256 + MIR SINE MIR 82 151 -111 762 181 106 11 chr10 80681044 80681232 -64908056 + MIR SINE MIR 6 211 -51 2326 94 0 28 chr10 80681328 80681464 -64907824 + AluSq SINE Alu 1 139 -174 2124 131 10 0 chr10 80681464 80681769 -64907519 + AluSx SINE Alu 1 308 -4 2326 94 0 28 chr10 80681769 80681942 -64907346 + AluSq SINE Alu 139 303 -10 2203 79 82 0 chr10 80681942 80682222 -64907066 - AluSx SINE Alu -9 303 1 2494 58 3 3 chr10 80682353 80682648 -64906640 - AluSc SINE Alu -10 299 5 1126 192 21 130 chr10 80683373 80683556 -64905732 - AluYb8 SINE Alu -7 301 170 2319 92 0 0 chr10 80683556 80683848 -64905440 - AluSg SINE Alu -18 292 1 1126 192 21 130 chr10 80683848 80684002 -64905286 - AluYb8 SINE Alu -138 170 1 284 232 0 0 chr10 80684017 80684073 -64905215 + L1MEc LINE L1 35 90 -6306 182 347 0 27 chr10 80684104 80684179 -64905109 - L3 LINE CR1 -495 1082 1010 2297 80 0 3 chr10 80684503 80684789 -64904499 - AluSg SINE Alu -23 287 3 840 110 5 22 chr10 80684839 80685009 -64904279 - FRAM SINE Alu -14 162 1 2299 100 7 3 chr10 80685026 80685327 -64903961 - AluSq SINE Alu -11 302 1 219 282 56 14 chr10 80685498 80685569 -64903719 + L2 LINE L2 3231 3304 -9 1961 137 12 40 chr10 80685696 80686017 -64903271 - AluJb SINE Alu 0 312 1 2516 79 3 0 chr10 80686859 80687163 -64902125 + AluSx SINE Alu 1 305 -7 486 158 147 0 chr10 80687766 80687861 -64901427 + AluJb SINE Alu 2 110 -202 1477 80 30 0 chr10 80687864 80688063 -64901225 - PABL_A LTR ERV1 0 660 456 563 270 60 13 chr10 80688075 80688342 -64900946 - LTR16B LTR ERVL -163 301 1 332 273 86 29 chr10 80688422 80688561 -64900727 - MER103 DNA DNA -19 147 1 231 139 0 0 chr10 80689556 80689592 -64899696 + MIR SINE MIR 150 185 -77 1181 153 0 0 chr10 80689592 80689769 -64899519 + AluSg/x SINE Alu 131 307 -5 236 297 68 0 chr10 80689769 80689843 -64899445 + MIR SINE MIR 184 262 0 2333 98 3 3 chr10 80689934 80690231 -64899057 + AluSp SINE Alu 1 297 -16 303 28 0 0 chr10 80690233 80690269 -64899019 + (CAGGG)n Simple_repeat Simple_repeat 2 37 0 1598 179 53 17 chr10 80690343 80690644 -64898644 + AluJb SINE Alu 1 312 0 2379 91 7 0 chr10 80691137 80691435 -64897853 - AluSq SINE Alu -13 300 1 2046 142 0 10 chr10 80691537 80691840 -64897448 - AluJb SINE Alu -12 300 1 2267 92 0 61 chr10 80691850 80692176 -64897112 - AluSq SINE Alu -6 307 2 256 338 191 19 chr10 80692661 80693090 -64896198 + L2 LINE L2 206 708 -2606 312 220 17 0 chr10 80693367 80693442 -64895846 + Zaphod DNA AcHobo 1 77 -616 1189 295 93 20 chr10 80693482 80693889 -64895399 + MER115 DNA AcHobo 29 465 -228 464 248 76 66 chr10 80693948 80694146 -64895142 + MLT1F1-int LTR MaLR 1022 1221 -150 2223 85 20 7 chr10 80694305 80694598 -64894690 + AluSg1 SINE Alu 1 297 -12 2361 201 95 2 chr10 80694601 80695119 -64894169 + MLT1F1 LTR MaLR 1 566 -1 1980 167 7 3 chr10 80695124 80695430 -64893858 - AluJo SINE Alu -5 307 1 666 322 61 53 chr10 80695437 80695634 -64893654 + L2 LINE L2 1933 2127 -1187 1830 130 94 7 chr10 80695634 80695911 -64893377 + AluSg SINE Alu 1 301 -9 666 322 61 53 chr10 80695911 80696257 -64893031 + L2 LINE L2 2127 2480 -834 667 175 48 0 chr10 80696361 80696487 -64892801 + FLAM_A SINE Alu 2 133 0 2416 101 0 13 chr10 80696491 80696807 -64892481 + AluSx SINE Alu 1 312 0 661 186 8 8 chr10 80697013 80697137 -64892151 + FLAM_C SINE Alu 1 124 -19 562 213 201 0 chr10 80697185 80697354 -64891934 + LTR40a LTR ERVL 1 203 -316 2128 115 3 57 chr10 80697430 80697761 -64891527 + AluSq SINE Alu 1 313 0 2082 119 0 29 chr10 80697762 80698072 -64891216 + AluSq SINE Alu 3 303 -10 1284 127 196 109 chr10 80698072 80698403 -64890885 - MER4A LTR ERV1 -44 620 261 627 103 21 10 chr10 80698403 80698500 -64890788 - MER4A LTR ERV1 -566 98 1 1227 244 9 38 chr10 80698511 80698831 -64890457 + LTR40b LTR ERVL 152 462 0 180 200 0 25 chr10 80698841 80698881 -64890407 + L2 LINE L2 3148 3186 -86 2591 58 0 10 chr10 80699699 80700008 -64889280 + AluY SINE Alu 1 306 -5 1845 163 179 25 chr10 80700117 80700375 -64888913 - LTR54 LTR ERV1 0 510 293 1690 145 10 49 chr10 80700375 80700679 -64888609 - AluJb SINE Alu -20 292 1 1845 163 179 25 chr10 80700679 80700862 -64888426 - LTR54 LTR ERV1 -217 293 1 1325 138 116 55 chr10 80703387 80703662 -64885626 - AluJo SINE Alu -20 292 1 2119 135 0 3 chr10 80704043 80704346 -64884942 - AluSx SINE Alu -10 302 1 2388 75 0 0 chr10 80704429 80704737 -64884551 + AluY SINE Alu 1 308 0 2202 129 0 0 chr10 80705497 80705791 -64883497 - AluSx SINE Alu -18 294 1 1837 151 3 34 chr10 80705882 80706180 -64883108 - AluJb SINE Alu -23 289 1 2381 88 0 3 chr10 80706323 80706618 -64882670 - AluY SINE Alu -17 294 1 2122 107 55 0 chr10 80706676 80706966 -64882322 - AluSx SINE Alu 0 312 7 192 280 0 65 chr10 80707199 80707306 -64881982 - L2 LINE L2 -81 3232 3133 2082 126 0 7 chr10 80707939 80708232 -64881056 + AluJo SINE Alu 1 291 -21 2014 149 0 13 chr10 80708343 80708644 -64880644 - AluSx SINE Alu -15 297 1 963 168 26 7 chr10 80708916 80709071 -64880217 + AluJb SINE Alu 141 298 -14 1317 169 9 0 chr10 80709131 80709356 -64879932 - AluJo SINE Alu -20 292 66 2295 99 7 0 chr10 80709447 80709740 -64879548 + AluSx SINE Alu 1 295 -17 27 29 0 0 chr10 80710193 80710227 -64879061 + AT_rich Low_complexity Low_complexity 1 34 0 2149 117 0 7 chr10 80710451 80710751 -64878537 - AluSx SINE Alu -14 298 1 2316 96 0 20 chr10 80710751 80711092 -64878196 - AluSg SINE Alu 0 310 1 2151 96 0 11 chr10 80711104 80711375 -64877913 - AluSx SINE Alu -44 268 1 1770 122 91 11 chr10 80712296 80712583 -64876705 - AluSg SINE Alu 0 310 1 990 105 0 0 chr10 80712616 80712740 -64876548 - FLAM_C SINE Alu -19 124 1 376 262 114 84 chr10 80712801 80713038 -64876250 - L1ME4a LINE L1 -30 6091 5848 833 167 248 40 chr10 80713701 80713923 -64875365 - AluJo SINE Alu -44 268 1 2142 115 33 10 chr10 80713940 80714244 -64875044 - AluSx SINE Alu -1 311 1 3365 182 129 16 chr10 80714546 80715319 -64873969 + MER21B LTR ERV1 1 861 -2 2091 195 71 21 chr10 80715331 80715767 -64873521 + MER21B-int LTR ERV1 1 458 -3733 672 230 62 0 chr10 80715762 80715923 -64873365 + MER21B-int LTR ERV1 1405 1575 -2616 * 926 188 56 34 chr10 80716247 80716581 -64872707 - LTR56 LTR ERV1 0 445 113 715 156 57 0 chr10 80716601 80716742 -64872546 - LTR23 LTR ERV1 -286 151 3 230 0 33 0 chr10 80716758 80716788 -64872500 + (TTTTG)n Simple_repeat Simple_repeat 1 31 0 2068 98 0 0 chr10 80716800 80717055 -64872233 - AluSq SINE Alu -54 259 5 324 261 23 11 chr10 80717236 80717324 -64871964 + MER21B LTR ERV1 1 89 -774 1779 147 16 33 chr10 80717418 80717724 -64871564 - AluSx SINE Alu -7 305 5 1931 190 114 99 chr10 80717773 80718441 -64870847 + MER21B LTR ERV1 98 775 -88 2106 95 44 17 chr10 80718544 80718838 -64870450 - AluSg SINE Alu -8 302 1 2544 74 0 0 chr10 80718849 80719160 -64870128 - AluY SINE Alu 0 311 1 1206 193 86 35 chr10 80719231 80719521 -64869767 - AluJb SINE Alu -7 305 1 232 254 0 0 chr10 80720748 80720807 -64868481 - L1MC4 LINE L1 -17 8025 7967 186 143 0 0 chr10 80720811 80720846 -64868442 + (T)n Simple_repeat Simple_repeat 1 35 0 334 250 78 31 chr10 80720905 80721033 -64868255 - L1MC5 LINE L1 -271 7690 7557 276 225 178 60 chr10 80721201 80721601 -64867687 - L1MC4 LINE L1 -2 8040 7594 2370 100 10 0 chr10 80723707 80724006 -64865282 - AluSx SINE Alu -10 302 1 241 203 82 0 chr10 80727486 80727565 -64861723 + MIR SINE MIR 75 146 -62 2031 138 7 0 chr10 80727781 80728077 -64861211 - AluSx SINE Alu -13 299 2 1693 144 37 37 chr10 80728084 80728383 -64860905 - AluJb SINE Alu -13 299 1 200 290 108 21 chr10 80728447 80728540 -64860748 + MIR SINE MIR 113 213 -49 2587 66 0 0 chr10 80728677 80728982 -64860306 - AluSg SINE Alu -5 305 1 474 298 53 50 chr10 80730941 80731280 -64858008 - MER102b DNA MER1_type -1 340 1 202 277 48 60 chr10 80731663 80731746 -64857542 + MIR SINE MIR 23 104 -158 966 226 94 26 chr10 80731785 80732075 -64857213 - MLT1E3 LTR MaLR 0 624 355 2446 70 3 3 chr10 80732075 80732377 -64856911 - AluY SINE Alu -9 302 1 2129 119 17 0 chr10 80732377 80732670 -64856618 - AluSx SINE Alu -14 298 1 966 226 94 26 chr10 80732670 80732784 -64856504 - MLT1E3 LTR MaLR -268 356 86 1204 174 0 20 chr10 80732784 80732985 -64856303 + AluJb SINE Alu 18 214 -98 745 143 0 0 chr10 80732985 80733097 -64856191 + AluJb SINE Alu 184 295 -17 1954 149 7 0 chr10 80733099 80733395 -64855893 + AluSx SINE Alu 1 298 -14 200 298 96 10 chr10 80733601 80733705 -64855583 - MIR SINE MIR -79 183 71 282 29 0 0 chr10 80734094 80734129 -64855159 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2085 121 0 3 chr10 80734132 80734414 -64854874 - AluSx SINE Alu -31 281 1 371 228 198 95 chr10 80734452 80734811 -64854477 + LTR67 LTR ERVL 68 463 -94 538 279 165 89 chr10 80735001 80735493 -64853795 + MLT1L LTR MaLR 32 560 -55 193 260 156 0 chr10 80735861 80735938 -64853350 - MIR SINE MIR -58 150 62 287 247 117 56 chr10 80737050 80737212 -64852076 + Charlie8 DNA MER1_type 15 186 -2231 2139 137 0 9 chr10 80737753 80738068 -64851220 + AluSx SINE Alu 1 312 0 952 227 11 89 chr10 80738086 80738368 -64850920 - MIR SINE MIR -1 261 2 745 271 100 11 chr10 80738375 80738656 -64850632 - MLT1J LTR MaLR -177 334 29 374 295 57 0 chr10 80738678 80738783 -64850505 - MIR SINE MIR -65 143 33 216 348 11 0 chr10 80739333 80739422 -64849866 - MIR3 SINE MIR 0 208 119 643 255 121 51 chr10 80739537 80739910 -64849378 + LTR16A1 LTR ERVL 58 456 -1 485 240 89 56 chr10 80739938 80740117 -64849171 + MIR3 SINE MIR 13 197 -11 2124 128 24 0 chr10 80740364 80740661 -64848627 - AluSx SINE Alu -8 304 1 694 281 76 16 chr10 80740677 80740926 -64848362 + MLT1L LTR MaLR 347 610 -5 190 269 77 0 chr10 80740988 80741040 -64848248 - MIR SINE MIR -88 120 65 255 252 16 38 chr10 80741404 80741516 -64847772 + GA-rich Low_complexity Low_complexity 1 109 0 2043 125 0 24 chr10 80742327 80742615 -64846673 + AluSg SINE Alu 1 281 -29 208 0 30 30 chr10 80742618 80742651 -64846637 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 897 259 105 65 chr10 80742652 80743127 -64846161 + MLT1G LTR MaLR 28 529 -61 2054 153 50 71 chr10 80743127 80743272 -64846016 - MLT1C LTR MaLR -1 466 319 2253 128 0 10 chr10 80743272 80743584 -64845704 - AluSx SINE Alu -3 309 1 2054 153 50 71 chr10 80743584 80743914 -64845374 - MLT1C LTR MaLR -148 319 1 897 259 105 65 chr10 80743914 80743979 -64845309 + MLT1G LTR MaLR 529 590 0 370 348 65 7 chr10 80744376 80744531 -64844757 + L2 LINE L2 3108 3271 -1 298 304 56 19 chr10 80744595 80744756 -64844532 + L1MEd LINE L1 54 220 -5899 1019 264 39 24 chr10 80744833 80745307 -64843981 + L1MEd LINE L1 895 1257 -4862 1581 193 57 20 chr10 80745312 80745613 -64843675 - AluJo SINE Alu 0 312 1 584 103 10 10 chr10 80745798 80745895 -64843393 + L1M4 LINE L1 5636 5732 -452 275 178 0 0 chr10 80745895 80745940 -64843348 + Alu SINE Alu 1 45 -258 315 143 0 0 chr10 80745940 80745989 -64843299 - THE1A LTR MaLR 0 355 307 2046 110 25 7 chr10 80745989 80746301 -64842987 - AluSx SINE Alu 0 326 10 370 266 16 83 chr10 80746428 80746680 -64842608 - L1MDa LINE L1 -3753 2787 2553 2185 134 13 0 chr10 80746719 80747026 -64842262 - AluSq SINE Alu -2 311 1 2381 102 0 0 chr10 80747091 80747394 -64841894 - AluSq SINE Alu -8 305 3 2075 115 20 10 chr10 80747557 80747853 -64841435 - AluSx SINE Alu -13 299 1 434 317 11 44 chr10 80748044 80748224 -64841064 - L1MDa LINE L1 -4445 2095 1922 1952 136 95 11 chr10 80748250 80748618 -64840670 - L1MB7 LINE L1 -17 6167 5769 189 0 0 0 chr10 80748618 80748639 -64840649 + (T)n Simple_repeat Simple_repeat 1 21 0 606 174 17 17 chr10 80748773 80748888 -64840400 - AluJb SINE Alu -81 231 117 611 209 50 16 chr10 80748888 80749070 -64840218 + L1MC4 LINE L1 5069 5256 -890 469 274 20 80 chr10 80749067 80749162 -64840126 - L1M4 LINE L1 -3659 2487 2388 * 1566 174 3 66 chr10 80749162 80749495 -64839793 - AluJo SINE Alu 0 312 1 469 274 20 80 chr10 80749495 80749749 -64839539 - L1M4 LINE L1 -3758 2388 2159 2107 147 13 0 chr10 80749788 80750095 -64839193 - AluSq SINE Alu -2 311 1 2185 128 3 7 chr10 80750161 80750465 -64838823 - AluSq SINE Alu -8 305 3 498 264 77 28 chr10 80750495 80750677 -64838611 + HAL1 LINE L1 85 275 -2232 1858 265 251 29 chr10 80750759 80751293 -64837995 - L2 LINE L2 -290 3023 2609 1787 191 3 0 chr10 80751293 80751592 -64837696 - AluJo SINE Alu -8 304 5 1858 265 251 29 chr10 80751592 80752044 -64837244 - L2 LINE L2 -704 2609 1820 691 297 22 9 chr10 80752051 80752273 -64837015 + L1MC4 LINE L1 5638 5862 -1946 1894 156 4 0 chr10 80752333 80752609 -64836679 + AluJo SINE Alu 1 277 -35 1621 231 88 67 chr10 80752787 80753613 -64835675 + L1MC4 LINE L1 7198 8041 -1 210 71 0 0 chr10 80753633 80753661 -64835627 + (GA)n Simple_repeat Simple_repeat 1 28 0 1574 258 169 16 chr10 80753693 80754282 -64835006 - L2 LINE L2 -1630 1684 994 2474 96 3 0 chr10 80754282 80754594 -64834694 + AluSp SINE Alu 1 313 0 1574 258 169 16 chr10 80754594 80754625 -64834663 - L2 LINE L2 -2320 994 969 1515 121 46 85 chr10 80754751 80754890 -64834398 - THE1B LTR MaLR -70 294 151 2158 132 0 0 chr10 80754890 80755191 -64834097 + AluSx SINE Alu 1 301 0 1515 121 46 85 chr10 80755191 80755356 -64833932 - THE1B LTR MaLR -213 151 1 1215 167 49 53 chr10 80755356 80755625 -64833663 + AluJo SINE Alu 41 308 0 1988 136 82 36 chr10 80755625 80755677 -64833611 + L1MB7 LINE L1 5736 5784 -400 2197 136 10 0 chr10 80755677 80755986 -64833302 + AluJb SINE Alu 1 312 0 1988 136 82 36 chr10 80755986 80756346 -64832942 + L1MB7 LINE L1 5784 6167 -17 434 317 11 44 chr10 80756372 80756552 -64832736 + L1MDa LINE L1 1922 2095 -4445 2162 111 10 10 chr10 80756743 80757041 -64832247 + AluSq SINE Alu 1 298 -15 788 149 7 64 chr10 80757053 80757194 -64832094 + AluJb SINE Alu 3 135 -177 24 0 0 0 chr10 80757194 80757218 -64832070 + AT_rich Low_complexity Low_complexity 1 24 0 3073 169 21 5 chr10 80757218 80757787 -64831501 + L1MB7 LINE L1 5596 6173 -11 183 42 0 0 chr10 80757887 80757911 -64831377 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 409 145 12 0 chr10 80757920 80757934 -64831354 - L1M4 LINE L1 -1086 5060 5048 2895 7 0 0 chr10 80757934 80758241 -64831047 - AluY SINE Alu -4 307 1 409 145 12 0 chr10 80758241 80758309 -64830979 - L1M4 LINE L1 -1098 5048 4977 1169 191 18 0 chr10 80758310 80758535 -64830753 - L1M4 LINE L1 -1339 4807 4579 1659 242 40 24 chr10 80758780 80758987 -64830301 - LTR16C LTR ERVL -2 489 287 982 157 79 65 chr10 80758987 80759033 -64830255 - MER20 DNA MER1_type 0 219 175 1887 161 18 0 chr10 80759033 80759313 -64829975 - AluSx SINE Alu -27 285 1 982 157 79 65 chr10 80759313 80759482 -64829806 - MER20 DNA MER1_type -44 175 1 1659 242 40 24 chr10 80759482 80759725 -64829563 - LTR16C LTR ERVL -204 287 32 465 206 9 37 chr10 80760155 80760262 -64829026 + MIR3 SINE MIR 81 184 -24 324 312 48 8 chr10 80761445 80761570 -64827718 + MIR SINE MIR 11 140 -122 2097 126 0 7 chr10 80761585 80761879 -64827409 + AluSx SINE Alu 7 298 -14 467 280 40 0 chr10 80762019 80762144 -64827144 - MIR SINE MIR -76 186 57 2190 122 7 0 chr10 80762711 80763014 -64826274 + AluSx SINE Alu 1 305 -7 196 214 0 0 chr10 80763019 80763061 -64826227 - L2 LINE L2 -19 3253 3212 1440 241 108 24 chr10 80763085 80763509 -64825779 - L2 LINE L2 0 3313 2854 2372 76 3 0 chr10 80763509 80763821 -64825467 - AluSq SINE Alu 0 313 1 1276 110 12 0 chr10 80763823 80763996 -64825292 - AluSq SINE Alu -15 298 124 438 288 110 7 chr10 80764001 80764147 -64825141 - MIR SINE MIR -50 212 52 562 158 0 93 chr10 80765091 80765112 -64824176 + L1MB8 LINE L1 6051 6072 -106 2242 104 17 0 chr10 80765112 80765410 -64823878 + AluSx SINE Alu 1 303 -9 562 158 0 93 chr10 80765410 80765527 -64823761 + L1MB8 LINE L1 6072 6176 -2 1742 171 14 3 chr10 80765740 80766032 -64823256 - AluJb SINE Alu -17 295 1 21 57 0 19 chr10 80766039 80766072 -64823216 + AT_rich Low_complexity Low_complexity 1 34 -18 2261 119 0 0 chr10 80766072 80766366 -64822922 + AluSx SINE Alu 1 294 -18 21 57 0 19 chr10 80766366 80766385 -64822903 + AT_rich Low_complexity Low_complexity 34 52 0 881 248 183 19 chr10 80766442 80766869 -64822419 - L1MC5 LINE L1 -51 7910 7414 2653 52 10 0 chr10 80766869 80767174 -64822114 - AluY SINE Alu -3 308 1 338 200 15 85 chr10 80767219 80767349 -64821939 - MLT1J LTR MaLR -66 445 325 899 143 29 19 chr10 80767354 80767544 -64821744 + MER3 DNA MER1_type 1 144 -65 331 181 83 0 chr10 80767917 80767989 -64821299 + MER3 DNA MER1_type 132 209 0 567 218 11 62 chr10 80768088 80768267 -64821021 - MLT1J LTR MaLR -327 184 15 183 224 155 0 chr10 80768377 80768435 -64820853 + L2 LINE L2 3172 3238 -34 1810 124 72 24 chr10 80768570 80768860 -64820428 - AluJo SINE Alu -8 304 1 1407 218 104 38 chr10 80768951 80769424 -64819864 - MLT1D LTR MaLR -1 504 1 216 259 19 19 chr10 80769500 80769554 -64819734 - MIR SINE MIR -181 81 28 2620 62 0 0 chr10 80769579 80769886 -64819402 - AluY SINE Alu -4 307 1 604 254 169 19 chr10 80770676 80770889 -64818399 - MIR SINE MIR -2 260 16 881 165 0 0 chr10 80771101 80771234 -64818054 - FLAM_C SINE Alu 0 133 1 390 275 63 14 chr10 80771664 80771806 -64817482 + L2 LINE L2 2914 3062 -210 2059 120 17 27 chr10 80771839 80772140 -64817148 - AluSx SINE Alu -14 298 1 2447 93 3 0 chr10 80772223 80772524 -64816764 - AluSp SINE Alu -11 302 1 2795 147 20 16 chr10 80772534 80773036 -64816252 - L1MB3 LINE L1 -6 6177 5674 848 164 26 0 chr10 80773057 80773209 -64816079 - L1ME LINE L1 -396 5770 5615 189 0 0 0 chr10 80773209 80773230 -64816058 + (TA)n Simple_repeat Simple_repeat 1 21 0 1260 134 0 0 chr10 80773230 80773401 -64815887 - AluSg/x SINE Alu -5 307 137 238 205 16 0 chr10 80773405 80773461 -64815827 - L1ME LINE L1 -551 5613 5548 1112 194 95 20 chr10 80775152 80775506 -64813782 - L1ME LINE L1 -609 5557 5175 2367 110 0 0 chr10 80775515 80775823 -64813465 - AluSg SINE Alu -2 308 1 2268 100 0 10 chr10 80775825 80776126 -64813162 - AluSx SINE Alu -14 298 1 1985 206 49 82 chr10 80776126 80776710 -64812578 - L1ME LINE L1 -2064 4082 3520 216 67 0 0 chr10 80776710 80776740 -64812548 + (TG)n Simple_repeat Simple_repeat 1 30 0 1985 206 49 82 chr10 80776740 80776805 -64812483 - L1ME LINE L1 -2626 3520 3454 1187 157 5 51 chr10 80776805 80777022 -64812266 + AluJb SINE Alu 104 310 -2 1963 165 43 3 chr10 80778000 80778351 -64810937 - MLT1A1 LTR MaLR 0 365 1 240 316 0 34 chr10 80778495 80778612 -64810676 + L1ME LINE L1 5599 5711 -410 309 51 0 0 chr10 80778867 80778906 -64810382 + (TG)n Simple_repeat Simple_repeat 1 39 0 183 80 0 0 chr10 80778928 80778953 -64810335 + (TTCA)n Simple_repeat Simple_repeat 4 28 0 560 318 112 44 chr10 80778963 80779347 -64809941 - L2 LINE L2 -34 3238 2829 278 246 14 0 chr10 80779368 80779437 -64809851 + MER94 DNA DNA 1 70 -64 313 278 33 0 chr10 80779461 80779551 -64809737 - L2 LINE L2 -513 2801 2709 1040 269 95 68 chr10 80780334 80780911 -64808377 + MLT1L LTR MaLR 1 593 -22 499 317 104 6 chr10 80781039 80781222 -64808066 + MIR SINE MIR 56 256 -6 182 125 0 25 chr10 80782027 80782067 -64807221 + (GGA)n Simple_repeat Simple_repeat 3 41 0 250 250 38 12 chr10 80782436 80782516 -64806772 + GA-rich Low_complexity Low_complexity 3 84 0 313 259 157 0 chr10 80783233 80783341 -64805947 - L2 LINE L2 0 3313 3189 671 232 182 10 chr10 80783453 80783651 -64805637 - MIR SINE MIR -15 247 16 594 253 19 38 chr10 80783923 80784081 -64805207 - MER63 DNA MER1_type -281 781 1 2271 97 7 7 chr10 80784322 80784622 -64804666 + AluSx SINE Alu 1 300 -12 590 306 28 6 chr10 80784838 80785018 -64804270 + MIR SINE MIR 67 250 -12 236 263 62 0 chr10 80786155 80786235 -64803053 - MLT1K LTR MaLR -314 274 190 1448 284 88 25 chr10 80787680 80787856 -64801432 - MLT1G1 LTR MaLR 0 595 431 2463 159 24 44 chr10 80787856 80787921 -64801367 - L1MB3 LINE L1 0 6183 6118 1865 120 75 0 chr10 80787921 80788187 -64801101 - AluSx SINE Alu -26 286 1 2463 159 24 44 chr10 80788187 80788619 -64800669 - L1MB3 LINE L1 -65 6118 5696 1448 284 88 25 chr10 80788619 80789002 -64800286 - MLT1G1 LTR MaLR -164 431 1 694 288 33 5 chr10 80789125 80789340 -64799948 - L3 LINE CR1 -48 1529 1309 21 0 0 0 chr10 80789617 80789638 -64799650 + AT_rich Low_complexity Low_complexity 1 21 0 1956 149 3 0 chr10 80789651 80789940 -64799348 + AluJb SINE Alu 1 290 -22 289 198 12 49 chr10 80789949 80790030 -64799258 - L3 LINE CR1 -615 962 885 697 310 91 27 chr10 80790608 80791014 -64798274 - MLT1K LTR MaLR -6 582 151 318 106 0 0 chr10 80791957 80792004 -64797284 + (TG)n Simple_repeat Simple_repeat 2 48 0 332 271 12 48 chr10 80792973 80793139 -64796149 + G-rich Low_complexity Low_complexity 5 164 0 23 78 0 0 chr10 80793496 80793547 -64795741 + GC_rich Low_complexity Low_complexity 1 51 0 225 133 22 22 chr10 80795081 80795126 -64794162 + GA-rich Low_complexity Low_complexity 2 46 0 414 333 38 25 chr10 80795321 80795639 -64793649 + L2 LINE L2 2818 3139 -133 397 265 78 0 chr10 80795686 80795788 -64793500 - L2 LINE L2 -1 3312 3203 509 154 114 0 chr10 80796036 80796159 -64793129 - L1ME3A LINE L1 -5 6165 6029 506 223 38 18 chr10 80796264 80796434 -64792854 - L1MB8 LINE L1 0 6178 6001 180 111 0 0 chr10 80796437 80796464 -64792824 + (CCCCAG)n Simple_repeat Simple_repeat 4 30 0 3185 166 21 5 chr10 80796498 80797078 -64792210 - L1MB7 LINE L1 0 6184 5596 24 0 0 0 chr10 80797078 80797102 -64792186 + AT_rich Low_complexity Low_complexity 1 24 0 765 149 7 64 chr10 80797102 80797243 -64792045 - AluJb SINE Alu -177 135 3 2173 125 3 0 chr10 80797255 80797552 -64791736 - AluSq SINE Alu -15 298 1 517 196 3 30 chr10 80797552 80797680 -64791608 - L1M4 LINE L1 -1132 5014 4895 231 117 33 83 chr10 80797662 80797722 -64791566 - L1M4 LINE L1 -2190 3956 3900 * 609 248 43 14 chr10 80797689 80797899 -64791389 - L1M3c LINE L1 -3557 3400 3185 8162 81 3 10 chr10 80797935 80799000 -64790288 - MER11C LTR ERVK -14 1057 1 2333 113 0 0 chr10 80799015 80799325 -64789963 - AluSg SINE Alu 0 310 1 2552 247 61 32 chr10 80799325 80799563 -64789725 - L1M3c LINE L1 -3762 3195 2965 2136 120 10 3 chr10 80799563 80799862 -64789426 - AluSx SINE Alu -11 301 1 2552 247 61 32 chr10 80799862 80800827 -64788461 - L1M3c LINE L1 -3992 2965 1977 304 271 95 29 chr10 80801159 80801369 -64787919 - L1M3c LINE L1 -6604 255 32 245 367 75 0 chr10 80801992 80802112 -64787176 - L2 LINE L2 0 3272 3144 2392 98 0 0 chr10 80802153 80802450 -64786838 - AluSx SINE Alu -10 302 6 27 29 0 0 chr10 80803379 80803413 -64785875 + AT_rich Low_complexity Low_complexity 1 34 0 22 0 0 0 chr10 80803431 80803453 -64785835 + AT_rich Low_complexity Low_complexity 1 22 0 4775 179 23 35 chr10 80803816 80804891 -64784397 - L1MB3 LINE L1 -1 6246 5160 15241 113 7 75 chr10 80804891 80806117 -64783171 + Tigger1 DNA MER2_type 2 1309 -1109 1848 150 0 14 chr10 80806117 80806411 -64782877 + AluJo SINE Alu 1 290 -22 15241 113 7 75 chr10 80806411 80807157 -64782131 + Tigger1 DNA MER2_type 1309 1760 -658 1856 167 7 10 chr10 80807157 80807463 -64781825 - AluJb SINE Alu -7 305 1 15241 113 7 75 chr10 80807463 80808080 -64781208 + Tigger1 DNA MER2_type 1760 2417 -1 4775 179 23 35 chr10 80808080 80808427 -64780861 - L1MB3 LINE L1 -1087 5160 2699 2536 226 64 32 chr10 80808461 80809310 -64779978 + L1MDa LINE L1 19 1127 -5413 3569 84 2 0 chr10 80809310 80809762 -64779526 - MLT2A2 LTR ERVL 0 453 1 2536 226 64 32 chr10 80809762 80809876 -64779412 + L1MDa LINE L1 1127 1236 -5304 921 140 29 64 chr10 80809886 80810057 -64779231 + AluSx SINE Alu 24 188 -124 536 47 0 0 chr10 80810065 80810129 -64779159 + THE1B LTR MaLR 292 355 -9 752 154 34 57 chr10 80810261 80810383 -64778905 - L1MA9 LINE L1 -89 6223 6100 243 0 0 0 chr10 80810383 80810410 -64778878 + (TATG)n Simple_repeat Simple_repeat 2 28 0 2224 109 3 0 chr10 80810413 80810696 -64778592 - AluSx SINE Alu -28 284 1 752 154 34 57 chr10 80810696 80810744 -64778544 - L1MA9 LINE L1 -214 6098 6053 382 247 31 62 chr10 80810744 80810825 -64778463 + MSTC LTR MaLR 1 64 -364 2464 78 0 25 chr10 80810825 80811144 -64778144 + AluY SINE Alu 1 311 0 382 247 31 62 chr10 80811144 80811159 -64778129 + MSTC LTR MaLR 64 78 -350 2012 156 0 0 chr10 80811168 80811470 -64777818 + AluJo SINE Alu 1 302 -10 3636 218 112 33 chr10 80811480 80811749 -64777539 - L1 LINE L1 -3140 4425 4178 1808 190 7 13 chr10 80811749 80812059 -64777229 + AluJo SINE Alu 1 308 -4 3636 218 112 33 chr10 80812059 80813034 -64776254 - L1 LINE L1 -3387 4178 3281 2028 164 0 0 chr10 80813034 80813332 -64775956 - AluJo SINE Alu -14 298 1 3636 218 112 33 chr10 80813332 80814147 -64775141 - L1 LINE L1 -4284 3281 2209 951 36 0 0 chr10 80814148 80814258 -64775030 - AluY SINE Alu -5 306 197 1115 151 80 24 chr10 80814258 80814470 -64774818 - L1MB3 LINE L1 -4958 1183 960 782 262 106 21 chr10 80814521 80815230 -64774058 - L1MB3 LINE L1 -5329 812 1 1794 184 27 70 chr10 80815232 80815260 -64774028 - L1MDa LINE L1 -4718 2223 2195 2298 120 49 6 chr10 80815260 80815609 -64773679 - THE1B LTR MaLR 0 364 1 1794 184 27 70 chr10 80815609 80816166 -64773122 - L1MDa LINE L1 -4746 2195 1663 604 147 0 0 chr10 80816186 80816281 -64773007 - AluJb SINE Alu -13 299 205 300 225 172 80 chr10 80816285 80816436 -64772852 + AluJb SINE Alu 40 204 -98 2240 210 73 47 chr10 80816763 80817261 -64772027 - MLT1E3 LTR MaLR -9 615 132 2057 132 0 17 chr10 80817261 80817557 -64771731 + AluJb SINE Alu 1 291 -21 2334 73 17 0 chr10 80817566 80817854 -64771434 + AluSg SINE Alu 5 297 -13 2240 210 73 47 chr10 80817854 80817944 -64771344 - MLT1E3 LTR MaLR -499 125 1 249 352 11 0 chr10 80818015 80818103 -64771185 - MIR3 SINE MIR -22 186 98 319 213 25 0 chr10 80818387 80818467 -64770821 - MER113 DNA MER1_type? -305 216 135 197 333 0 0 chr10 80818664 80818742 -64770546 + MIR SINE MIR 184 261 -1 2195 104 3 13 chr10 80819167 80819465 -64769823 + AluSx SINE Alu 1 295 -17 21 0 0 0 chr10 80820136 80820157 -64769131 + AT_rich Low_complexity Low_complexity 1 21 0 1265 147 11 0 chr10 80820157 80820347 -64768941 + AluJb SINE Alu 3 194 -118 260 333 29 34 chr10 80820566 80820773 -64768515 - L1MDa LINE L1 -4955 1468 1263 235 292 22 34 chr10 80821176 80821265 -64768023 - L1MDa LINE L1 -5977 954 867 704 231 12 18 chr10 80821265 80821434 -64767854 + MIR SINE MIR 18 185 -77 186 43 0 0 chr10 80821439 80821462 -64767826 + (TG)n Simple_repeat Simple_repeat 2 24 0 644 276 18 0 chr10 80821639 80821809 -64767479 + MER5B DNA MER1_type 6 178 0 2631 61 0 0 chr10 80823644 80823954 -64765334 + AluY SINE Alu 1 310 -1 194 259 19 19 chr10 80823979 80824033 -64765255 + MIR SINE MIR 28 81 -181 1357 216 104 38 chr10 80824109 80824582 -64764706 + MLT1D LTR MaLR 1 504 -1 1800 123 72 24 chr10 80824673 80824965 -64764323 + AluJo SINE Alu 1 306 -6 603 218 11 62 chr10 80825268 80825447 -64763841 + MLT1J LTR MaLR 15 184 -327 350 181 83 0 chr10 80825546 80825618 -64763670 - MER3 DNA MER1_type 0 209 132 949 143 29 19 chr10 80825994 80826184 -64763104 - MER3 DNA MER1_type -43 166 1 376 200 15 85 chr10 80826189 80826319 -64762969 + MLT1J LTR MaLR 325 445 -66 2640 52 10 0 chr10 80826364 80826669 -64762619 + AluY SINE Alu 1 308 -3 961 246 183 19 chr10 80826669 80827096 -64762192 + L1MC5 LINE L1 7414 7910 -51 2166 102 24 17 chr10 80827170 80827463 -64761825 - AluSx SINE Alu -17 295 1 240 284 23 0 chr10 80827902 80827990 -64761298 - L3 LINE CR1 -411 1166 1077 1480 229 65 10 chr10 80828014 80828487 -64760801 - MLT1G LTR MaLR 0 590 22 2414 72 3 0 chr10 80828542 80828833 -64760455 - AluY SINE Alu -19 292 1 1801 185 0 3 chr10 80829554 80829851 -64759437 + AluJo SINE Alu 1 296 -16 513 194 0 73 chr10 80829968 80830092 -64759196 - MIR SINE MIR -127 135 21 241 156 125 16 chr10 80830221 80830285 -64759003 + MIR SINE MIR 112 182 -80 797 290 104 36 chr10 80831845 80832210 -64757078 + MLT1K LTR MaLR 2 391 -197 2470 67 0 16 chr10 80832430 80832744 -64756544 - AluY SINE Alu -2 309 1 452 157 24 0 chr10 80832767 80832850 -64756438 - MER96 DNA MER1_type? -90 85 1 256 292 185 20 chr10 80833430 80833625 -64755663 + MIR SINE MIR 23 249 -13 2102 135 7 0 chr10 80835496 80835792 -64753496 + AluJo SINE Alu 4 301 -11 842 181 18 0 chr10 80835793 80835959 -64753329 + L1MDa LINE L1 1954 2122 -4418 609 110 0 0 chr10 80835961 80836052 -64753236 + (TTCC)n Simple_repeat Simple_repeat 1 91 0 2456 178 59 17 chr10 80836054 80836072 -64753216 + L1MDa LINE L1 2105 2121 -4572 1756 161 42 21 chr10 80836072 80836358 -64752930 - AluJb SINE Alu -20 292 1 2456 178 59 17 chr10 80836358 80836971 -64752317 + L1MDa LINE L1 2121 2803 -3890 1355 193 40 118 chr10 80836939 80837304 -64751984 + L1MDa LINE L1 3776 4168 -2372 * 2286 113 3 0 chr10 80837304 80837613 -64751675 + AluSx SINE Alu 1 303 -9 1355 193 40 118 chr10 80837613 80837640 -64751648 + L1MDa LINE L1 4168 4196 -2344 881 141 0 15 chr10 80837640 80837775 -64751513 + FLAM_C SINE Alu 1 133 0 1355 193 40 118 chr10 80837775 80837999 -64751289 + L1MDa LINE L1 4196 4345 -2195 353 83 0 0 chr10 80837997 80838045 -64751243 + L1MD1 LINE L1 6117 6164 -78 * 2449 143 59 5 chr10 80838045 80838450 -64750838 + MSTA LTR MaLR 1 427 -1 3247 167 11 2 chr10 80838451 80839035 -64750253 + MSTA-int LTR MaLR 1 548 -1032 249 300 0 17 chr10 80839076 80839196 -64750092 - L1MEc LINE L1 -4184 2031 1914 2120 92 7 3 chr10 80839232 80839526 -64749762 - AluSc SINE Alu -14 295 1 1644 157 3 37 chr10 80839652 80839946 -64749342 + AluJo SINE Alu 1 284 -28 186 43 0 0 chr10 80839946 80839969 -64749319 + (CCAA)n Simple_repeat Simple_repeat 2 24 0 2477 199 64 53 chr10 80839974 80840823 -64748465 - L1ME1 LINE L1 -263 5903 5282 1973 95 41 7 chr10 80840823 80841118 -64748170 + AluSq SINE Alu 1 305 -8 2477 199 64 53 chr10 80841118 80841413 -64747875 - L1ME1 LINE L1 -884 5282 4992 1615 170 9 28 chr10 80841413 80841731 -64747557 - AluJo SINE Alu 0 312 1 1008 156 74 15 chr10 80841771 80842424 -64746864 - L1MB7 LINE L1 -14 6170 4769 854 209 0 12 chr10 80842434 80842597 -64746691 - FRAM SINE Alu -16 160 1 2125 197 62 40 chr10 80842597 80842967 -64746321 - L1MB7 LINE L1 -1373 4773 4413 963 175 6 6 chr10 80842967 80843127 -64746161 - FRAM SINE Alu -6 160 1 2125 197 62 40 chr10 80843127 80843143 -64746145 - L1MB7 LINE L1 -1733 4413 4399 557 125 0 0 chr10 80843143 80843223 -64746065 - MADE1 DNA Mariner 0 80 1 2125 197 62 40 chr10 80843223 80843414 -64745874 - L1MB7 LINE L1 -1747 4399 4182 502 269 101 22 chr10 80843388 80843477 -64745811 - L1MEc LINE L1 -4585 1811 1730 * 189 0 0 0 chr10 80843477 80843498 -64745790 + (TTTC)n Simple_repeat Simple_repeat 2 22 0 502 269 101 22 chr10 80843498 80843765 -64745523 - L1MEc LINE L1 -4666 1730 1427 * 13936 145 27 52 chr10 80843749 80843807 -64745481 - L1MA5 LINE L1 0 6300 6242 1571 114 85 50 chr10 80843807 80844088 -64745200 - AluSx SINE Alu -21 291 1 13936 145 27 52 chr10 80844088 80845846 -64743442 - L1MA5 LINE L1 -58 6242 4442 2371 79 0 3 chr10 80845846 80846151 -64743137 - AluSx SINE Alu -8 304 1 13936 145 27 52 chr10 80846151 80846553 -64742735 - L1MA5 LINE L1 -1858 4442 4031 1614 162 0 49 chr10 80846553 80846881 -64742407 - AluJo SINE Alu 0 312 1 13936 145 27 52 chr10 80846881 80848549 -64740739 - L1MA5 LINE L1 -2269 4031 2504 1029 166 30 20 chr10 80848550 80848749 -64740539 - AluJo SINE Alu -8 304 104 250 94 0 0 chr10 80848751 80848783 -64740505 + U2 snRNA snRNA 2 33 -155 655 191 0 0 chr10 80848783 80848888 -64740400 - FLAM_A SINE Alu -25 117 13 1215 163 28 4 chr10 80848902 80849153 -64740135 - L1MA5 LINE L1 -3628 2518 2262 724 253 81 25 chr10 80849152 80849560 -64739728 - L1MEc LINE L1 -4927 1469 1039 * 6318 59 15 39 chr10 80849573 80850499 -64738789 - SVA Other Other 0 1386 483 22 0 0 0 chr10 80850739 80850761 -64738527 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr10 80851144 80851165 -64738123 + AT_rich Low_complexity Low_complexity 1 21 0 347 203 14 14 chr10 80851554 80851628 -64737660 + MER20B DNA MER1_type 134 207 -576 380 176 176 39 chr10 80851628 80851730 -64737558 - MER91C DNA MER1_type -23 117 2 1664 250 66 13 chr10 80851736 80852268 -64737020 + MER20B DNA MER1_type 209 768 -15 2267 91 3 0 chr10 80853177 80853475 -64735813 - AluSg SINE Alu -11 299 1 887 242 39 39 chr10 80853593 80853849 -64735439 + MIR SINE MIR 2 257 -5 369 284 43 37 chr10 80854217 80854379 -64734909 + MER117 DNA MER1_type 9 171 -26 1138 210 179 0 chr10 80854789 80855051 -64734237 + LTR16C LTR ERVL 183 491 0 467 246 78 63 chr10 80856987 80857255 -64732033 + L1MC4a LINE L1 5748 6019 -102 2376 113 27 21 chr10 80857307 80857680 -64731608 + THE1C LTR MaLR 1 375 0 1834 108 0 0 chr10 80857827 80858077 -64731211 + AluSx SINE Alu 14 263 -49 387 0 0 0 chr10 80858089 80858132 -64731156 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 2374 93 0 0 chr10 80858528 80858838 -64730450 + AluSg SINE Alu 1 310 0 2185 94 0 7 chr10 80859954 80860261 -64729027 - AluSx SINE Alu -7 305 1 228 178 22 0 chr10 80861018 80861063 -64728225 + GA-rich Low_complexity Low_complexity 4 49 0 686 269 148 19 chr10 80861121 80861508 -64727780 + LTR16A LTR ERVL 33 457 0 459 253 105 24 chr10 80861633 80861835 -64727453 + MIR SINE MIR 11 235 -27 1507 167 43 0 chr10 80862061 80862367 -64726921 + AluSx SINE Alu 1 318 0 686 310 204 21 chr10 80862391 80862813 -64726475 + L2 LINE L2 2815 3313 0 426 233 49 86 chr10 80863086 80863162 -64726126 + MER103 DNA DNA 8 85 -81 2044 110 0 7 chr10 80863162 80863452 -64725836 - AluY SINE Alu -23 288 1 426 233 49 86 chr10 80863452 80863538 -64725750 + MER103 DNA DNA 85 164 -2 1951 143 0 0 chr10 80863544 80863844 -64725444 - AluSx SINE Alu -9 303 4 242 305 25 100 chr10 80863914 80864114 -64725174 - MIR3 SINE MIR -19 189 5 1916 104 80 58 chr10 80864353 80864392 -64724896 - THE1C LTR MaLR -2 373 336 2086 126 7 0 chr10 80864392 80864701 -64724587 + AluSx SINE Alu 1 311 -1 1916 104 80 58 chr10 80864701 80865026 -64724262 - THE1C LTR MaLR -39 336 1 1103 154 11 0 chr10 80865029 80865211 -64724077 + MER5A DNA MER1_type 6 189 0 2536 95 43 75 chr10 80865816 80866258 -64723030 - MSTA LTR MaLR 0 428 1 21 57 0 0 chr10 80867185 80867220 -64722068 + AT_rich Low_complexity Low_complexity 1 35 0 613 236 42 14 chr10 80868321 80868465 -64720823 - MIR SINE MIR -87 175 28 1314 223 109 56 chr10 80869059 80869240 -64720048 + MLT1J LTR MaLR 21 191 -320 1509 179 18 14 chr10 80869240 80869553 -64719735 - AluJb SINE Alu 0 314 1 1314 223 109 56 chr10 80869553 80869747 -64719541 + MLT1J LTR MaLR 191 417 -94 1843 145 36 10 chr10 80869836 80870140 -64719148 - AluSx SINE Alu 0 312 1 231 263 105 11 chr10 80871746 80871841 -64717447 - L2 LINE L2 0 3272 3169 212 200 14 0 chr10 80872275 80872345 -64716943 + (CA)n Simple_repeat Simple_repeat 2 72 0 266 296 0 0 chr10 80872371 80872459 -64716829 + (CA)n Simple_repeat Simple_repeat 1 88 0 1204 237 94 18 chr10 80873333 80873826 -64715462 - MLT1G1 LTR MaLR 0 595 3 434 238 309 40 chr10 80874150 80874474 -64714814 + MLT1J LTR MaLR 93 503 -8 426 292 86 88 chr10 80874636 80875092 -64714196 + L2 LINE L2 2804 3258 -14 804 290 9 13 chr10 80875333 80875557 -64713731 + MIR SINE MIR 28 250 -12 1036 202 29 19 chr10 80876261 80876469 -64712819 + MER63A DNA MER1_type 1 210 0 751 222 35 66 chr10 80876548 80876746 -64712542 + MIR SINE MIR 2 193 -69 2168 109 0 0 chr10 80877481 80877774 -64711514 + AluSx SINE Alu 1 293 -19 1496 231 65 10 chr10 80877829 80878302 -64710986 + MLT1G LTR MaLR 22 590 0 276 284 23 0 chr10 80878326 80878414 -64710874 + L3 LINE CR1 1077 1166 -411 1940 106 25 21 chr10 80878853 80879161 -64710127 + AluSx SINE Alu 1 309 0 184 30 61 0 chr10 80879253 80879286 -64710002 + T-rich Low_complexity Low_complexity 2 36 0 1494 187 18 7 chr10 80879288 80879566 -64709722 - AluJo SINE Alu -30 282 2 418 246 33 0 chr10 80879567 80879689 -64709599 - L1M4 LINE L1 -2657 3489 3364 628 282 50 29 chr10 80881985 80882226 -64707062 - MIR SINE MIR -6 256 11 2093 118 3 0 chr10 80882526 80882823 -64706465 + AluSx SINE Alu 1 298 -14 424 232 123 55 chr10 80882910 80883130 -64706158 + L1ME3A LINE L1 5695 5929 -235 1660 164 20 20 chr10 80883144 80883448 -64705840 + AluJo SINE Alu 1 304 -8 490 224 56 8 chr10 80883587 80883712 -64705576 - MER94 DNA DNA -3 131 1 380 363 19 13 chr10 80883987 80884144 -64705144 - MER5A DNA MER1_type -22 167 10 532 191 92 15 chr10 80884342 80884473 -64704815 + MIR SINE MIR 13 153 -109 23 54 0 0 chr10 80884513 80884550 -64704738 + AT_rich Low_complexity Low_complexity 1 37 0 1375 233 80 60 chr10 80884554 80885141 -64704147 + L1MC4 LINE L1 7444 8042 0 2447 59 0 3 chr10 80885186 80885490 -64703798 + AluY SINE Alu 1 303 -8 1756 117 3 47 chr10 80885500 80885636 -64703652 + AluSx SINE Alu 1 141 -171 2169 119 7 0 chr10 80885636 80885946 -64703342 + AluSx SINE Alu 1 312 0 1756 117 3 47 chr10 80885946 80886109 -64703179 + AluSx SINE Alu 141 287 -25 230 286 202 12 chr10 80886116 80886284 -64703004 + L1ME3A LINE L1 5966 6165 -5 602 265 12 24 chr10 80886826 80886996 -64702292 - MIR SINE MIR -3 259 92 352 146 18 0 chr10 80886998 80887053 -64702235 - MER45A DNA AcHobo 0 178 123 1063 123 0 83 chr10 80887053 80887257 -64702031 + AluJo SINE Alu 1 187 -125 1769 142 13 35 chr10 80887259 80887570 -64701718 + AluJb SINE Alu 2 305 -7 1000 153 20 55 chr10 80887370 80887572 -64701716 + AluJb SINE Alu 113 307 -5 180 176 0 0 chr10 80887585 80887619 -64701669 + A-rich Low_complexity Low_complexity 3 36 0 545 219 58 15 chr10 80887619 80887756 -64701532 - MER45A DNA AcHobo -35 143 1 355 256 56 0 chr10 80887756 80887846 -64701442 - MIR SINE MIR -165 97 3 2145 116 0 0 chr10 80888316 80888637 -64700651 - AluSg SINE Alu 0 328 8 561 301 89 63 chr10 80889248 80889630 -64699658 - MLT1J LTR MaLR -8 503 112 339 316 26 9 chr10 80890917 80891031 -64698257 + L2 LINE L2 2963 3078 -194 250 191 257 9 chr10 80891097 80891202 -64698086 - L2 LINE L2 0 3313 3183 479 253 237 16 chr10 80891500 80891686 -64697602 + LTR16A LTR ERVL 217 443 -7 316 277 0 7 chr10 80891711 80891799 -64697489 + MER91A DNA MER1_type 108 187 -3 1033 257 82 54 chr10 80892653 80892704 -64696584 + MLT1J LTR MaLR 21 69 -442 1513 176 53 58 chr10 80892704 80893080 -64696208 - MLT1A2 LTR MaLR 0 374 1 1033 257 82 54 chr10 80893080 80893506 -64695782 + MLT1J LTR MaLR 69 511 0 209 167 42 0 chr10 80893688 80893736 -64695552 + CT-rich Low_complexity Low_complexity 2 51 0 356 367 99 31 chr10 80893737 80894031 -64695257 - L2 LINE L2 -16 3256 2943 234 158 0 0 chr10 80894045 80894083 -64695205 + MIR SINE MIR 120 157 -105 219 288 64 48 chr10 80894197 80894322 -64694966 - MIR3 SINE MIR -79 129 3 432 323 114 9 chr10 80894745 80894965 -64694323 - MIR SINE MIR -14 248 6 461 236 112 12 chr10 80895340 80895501 -64693787 + L1MC5 LINE L1 7747 7923 -38 2104 128 6 6 chr10 80895503 80895815 -64693473 + AluSx SINE Alu 1 312 0 232 308 117 8 chr10 80895871 80895991 -64693297 + MER5B DNA MER1_type 46 178 0 * 355 234 12 105 chr10 80895991 80896082 -64693206 + MIR SINE MIR 65 136 -126 828 66 0 0 chr10 80896082 80896188 -64693100 - L1PA13 LINE L1 -16 6147 6042 355 234 12 105 chr10 80896188 80896248 -64693040 + MIR SINE MIR 136 200 -62 189 107 0 0 chr10 80899139 80899167 -64690121 + (TGGGGG)n Simple_repeat Simple_repeat 4 31 0 186 143 0 0 chr10 80899940 80899975 -64689313 + (T)n Simple_repeat Simple_repeat 1 35 0 214 169 17 51 chr10 80900608 80900667 -64688621 + C-rich Low_complexity Low_complexity 4 60 0 * 221 158 0 53 chr10 80900623 80900680 -64688608 + CT-rich Low_complexity Low_complexity 4 57 0 240 122 0 0 chr10 80902008 80902049 -64687239 + (CCG)n Simple_repeat Simple_repeat 2 42 0 23 33 0 0 chr10 80902167 80902197 -64687091 + GC_rich Low_complexity Low_complexity 1 30 0 240 59 0 0 chr10 80903266 80903300 -64685988 + (CCG)n Simple_repeat Simple_repeat 3 36 0 22 0 0 0 chr10 80903805 80903827 -64685461 + GC_rich Low_complexity Low_complexity 1 22 0 219 170 0 0 chr10 80904617 80904664 -64684624 + GA-rich Low_complexity Low_complexity 6 52 0 233 342 17 8 chr10 80907626 80907746 -64681542 + CT-rich Low_complexity Low_complexity 1 121 0 22 35 0 0 chr10 80910032 80910061 -64679227 + GC_rich Low_complexity Low_complexity 1 29 0 26 30 0 0 chr10 80910205 80910238 -64679050 + GC_rich Low_complexity Low_complexity 1 33 0 27 49 0 0 chr10 80911607 80911648 -64677640 + GC_rich Low_complexity Low_complexity 1 41 0 551 274 57 0 chr10 80912020 80912177 -64677111 - MIR SINE MIR -3 259 94 538 275 140 30 chr10 80912446 80912924 -64676364 + L2 LINE L2 2654 3188 -84 234 346 105 8 chr10 80913366 80913499 -64675789 + L2 LINE L2 2613 2758 -556 31 0 0 0 chr10 80913899 80913930 -64675358 + AT_rich Low_complexity Low_complexity 1 31 0 1789 144 0 0 chr10 80913949 80914213 -64675075 - AluJb SINE Alu -27 285 22 351 259 123 29 chr10 80914228 80914398 -64674890 - L1ME LINE L1 -311 5810 5625 312 308 82 88 chr10 80914604 80915059 -64674229 + MLT1L LTR MaLR 110 504 -7 201 39 0 0 chr10 80915095 80915121 -64674167 + (CAA)n Simple_repeat Simple_repeat 2 27 0 262 285 90 28 chr10 80915147 80915291 -64673997 - MARNA DNA Mariner -148 438 286 522 276 0 8 chr10 80915707 80915834 -64673454 + LTR67 LTR ERVL 429 554 -3 257 330 78 0 chr10 80916056 80916159 -64673129 - MIR SINE MIR -14 248 138 1780 150 14 3 chr10 80916725 80917012 -64672276 + AluJo SINE Alu 1 290 -22 2108 112 10 13 chr10 80917851 80918156 -64671132 - AluSx SINE Alu -8 304 1 755 255 86 25 chr10 80918340 80918583 -64670705 + MIR SINE MIR 5 262 0 495 142 80 18 chr10 80918905 80919018 -64670270 - MIR SINE MIR -70 192 73 257 301 161 21 chr10 80919162 80919355 -64669933 + L1ME4a LINE L1 5846 6065 -56 523 198 18 0 chr10 80920921 80921032 -64668256 + L2 LINE L2 1885 1997 -1317 1404 293 68 39 chr10 80921050 80921787 -64667501 - L1MC4 LINE L1 -2 8040 7275 2217 115 0 0 chr10 80921787 80922099 -64667189 - AluSx SINE Alu 0 312 1 1404 293 68 39 chr10 80922099 80922190 -64667098 - L1MC4 LINE L1 -767 7275 7188 779 275 134 0 chr10 80922197 80922488 -64666800 + L2 LINE L2 1984 2313 -1001 659 127 18 45 chr10 80922570 80922680 -64666608 + FRAM SINE Alu 45 151 -25 2294 89 0 3 chr10 80922716 80923019 -64666269 + AluSx SINE Alu 1 302 -10 187 180 16 49 chr10 80923019 80923080 -64666208 + L2 LINE L2 2331 2389 -925 611 259 140 55 chr10 80923086 80923113 -64666175 - L2 LINE L2 0 3313 3290 1744 161 3 16 chr10 80923113 80923429 -64665859 + AluJb SINE Alu 1 312 0 611 259 140 55 chr10 80923429 80923694 -64665594 - L2 LINE L2 -23 3290 2996 1060 260 155 54 chr10 80923701 80923930 -64665358 + L2 LINE L2 2414 2618 -695 2268 105 0 0 chr10 80923930 80924236 -64665052 - AluSg SINE Alu -4 306 1 2400 85 0 0 chr10 80924244 80924551 -64664737 - AluSc SINE Alu -2 307 1 1060 260 155 54 chr10 80924551 80924627 -64664661 + L2 LINE L2 2624 2691 -622 1722 171 0 10 chr10 80924627 80924925 -64664363 + AluJb SINE Alu 15 309 -3 1060 260 155 54 chr10 80924925 80925292 -64663996 + L2 LINE L2 2691 3180 -133 1472 154 61 17 chr10 80925292 80925585 -64663703 - AluJb SINE Alu -6 306 1 1060 260 155 54 chr10 80925585 80925733 -64663555 + L2 LINE L2 3180 3312 -1 1964 142 7 0 chr10 80925977 80926273 -64663015 - AluSx SINE Alu -14 298 1 372 280 68 8 chr10 80926608 80926726 -64662562 + L2 LINE L2 2938 3062 -251 334 231 39 0 chr10 80926742 80926820 -64662468 + MER91A DNA MER1_type 22 102 -94 539 278 72 65 chr10 80926858 80927121 -64662167 + L2 LINE L2 3049 3313 0 502 182 75 53 chr10 80927135 80927224 -64662064 - L1MA4 LINE L1 -1 6299 6213 1730 162 0 30 chr10 80927224 80927526 -64661762 - AluJo SINE Alu -19 293 1 502 182 75 53 chr10 80927526 80927623 -64661665 - L1MA4 LINE L1 -87 6213 6109 321 296 0 46 chr10 80927672 80927780 -64661508 - MIR SINE MIR -64 144 42 21 0 0 0 chr10 80928020 80928041 -64661247 + AT_rich Low_complexity Low_complexity 1 21 0 405 229 92 9 chr10 80928397 80928506 -64660782 + MIR3 SINE MIR 54 171 -37 266 204 0 0 chr10 80929091 80929145 -64660143 - FLAM_A SINE Alu 0 133 80 235 185 19 37 chr10 80929152 80929206 -64660082 - AluSp SINE Alu -138 165 113 1789 147 43 7 chr10 80929247 80929546 -64659742 + AluJo SINE Alu 1 310 -2 25 0 0 0 chr10 80929618 80929643 -64659645 + AT_rich Low_complexity Low_complexity 1 25 0 185 0 40 0 chr10 80930827 80930852 -64658436 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 203 196 11 43 chr10 80931003 80931095 -64658193 + CT-rich Low_complexity Low_complexity 3 91 0 2075 157 34 11 chr10 80931193 80931550 -64657738 + MLT1A1 LTR MaLR 1 365 0 21 0 0 0 chr10 80935492 80935513 -64653775 + AT_rich Low_complexity Low_complexity 1 21 0 719 270 44 18 chr10 80938658 80938898 -64650390 + MIR SINE MIR 2 256 -6 2332 98 0 0 chr10 80938913 80939219 -64650069 - AluSx SINE Alu -6 306 1 362 234 43 0 chr10 80939434 80939528 -64649760 - MER20B DNA MER1_type -630 153 56 1650 130 76 4 chr10 80940181 80940458 -64648830 - AluJo SINE Alu -11 301 5 1520 107 5 0 chr10 80940548 80940763 -64648525 - AluSq SINE Alu -15 298 83 415 258 113 27 chr10 80941368 80941574 -64647714 - MLT1I LTR MaLR 0 409 155 201 337 0 56 chr10 80941806 80941895 -64647393 - MIR SINE MIR -159 103 20 263 241 38 90 chr10 80942684 80942817 -64646471 + L1ME4a LINE L1 5637 5762 -359 1624 141 13 66 chr10 80942849 80943154 -64646134 + AluJb SINE Alu 1 289 -23 304 225 78 78 chr10 80943246 80943388 -64645900 + L1ME4a LINE L1 5968 6109 -12 7306 149 74 20 chr10 80944194 80945663 -64643625 + L1 LINE L1 3436 4983 -1163 285 154 15 15 chr10 80945664 80945729 -64643559 + L1 LINE L1 4952 5016 -1130 1290 166 33 0 chr10 80945729 80945970 -64643318 + L1MA9 LINE L1 6064 6312 0 2157 119 6 3 chr10 80947023 80947335 -64641953 - AluSq SINE Alu 0 313 1 2178 88 3 7 chr10 80951320 80951617 -64637671 + AluY SINE Alu 1 296 -15 202 323 105 32 chr10 80951796 80951920 -64637368 - MIR3 SINE MIR -11 197 65 708 207 7 22 chr10 80952015 80952150 -64637138 - FLAM_A SINE Alu 0 133 1 938 166 0 0 chr10 80953337 80953482 -64635806 + FRAM SINE Alu 1 144 -32 262 335 97 11 chr10 80953554 80953730 -64635558 + MIR SINE MIR 53 243 -19 198 226 376 21 chr10 80953674 80953767 -64635521 - MIR SINE MIR -2 260 135 * 255 31 0 0 chr10 80954519 80954551 -64634737 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 309 216 0 0 chr10 80955193 80955244 -64634044 + L2 LINE L2 3250 3300 -13 917 223 62 4 chr10 80955822 80956064 -64633224 + ORSL DNA AcHobo 1 256 -19 24 96 0 0 chr10 80956379 80956452 -64632836 + GC_rich Low_complexity Low_complexity 1 73 0 321 68 0 0 chr10 81056647 81056691 -64532597 + (CA)n Simple_repeat Simple_repeat 2 45 0 1510 183 19 0 chr10 81057136 81057404 -64531884 - AluJb SINE Alu -12 300 28 847 201 82 15 chr10 81058511 81058780 -64530508 + AluJo SINE Alu 1 287 -15 407 296 0 10 chr10 81059009 81059107 -64530181 - HERV16 LTR ERVL -2049 2947 2851 1401 165 0 77 chr10 81059179 81059451 -64529837 + AluJo SINE Alu 43 293 -19 239 130 0 130 chr10 81059453 81059522 -64529766 + L1M4 LINE L1 4982 5041 -1105 2189 186 139 40 chr10 81059600 81060104 -64529184 + MLT2B3 LTR ERVL 1 554 0 1309 165 9 0 chr10 81061878 81062090 -64527198 - AluJb SINE Alu -7 305 92 425 145 0 14 chr10 81062137 81062206 -64527082 + AluS SINE Alu 2 69 -241 468 170 40 10 chr10 81063492 81063592 -64525696 - L1MA8 LINE L1 -43 6248 6146 1704 168 34 3 chr10 81063604 81063925 -64525363 - MER44D DNA MER2_type 0 609 9 434 251 43 89 chr10 81063934 81064169 -64525119 + L1ME3A LINE L1 5778 6001 -169 841 193 5 25 chr10 81064395 81064597 -64524691 + MER1B DNA MER1_type 1 198 -99 506 106 106 0 chr10 81064722 81064807 -64524481 - Tigger4(Zombi) DNA MER2_type -93 2638 2545 2341 81 3 16 chr10 81064807 81065117 -64524171 - AluY SINE Alu -5 306 1 1421 252 86 29 chr10 81065321 81065868 -64523420 + MER6 DNA MER2_type 20 597 -268 2000 143 4 0 chr10 81066588 81066895 -64522393 - AluSx SINE Alu 0 308 1 862 186 78 43 chr10 81066925 81067247 -64522041 + HSMAR2 DNA Mariner 1 333 -969 261 128 0 0 chr10 81067414 81067453 -64521835 - MIR SINE MIR -4 258 220 1495 202 64 19 chr10 81067461 81067612 -64521676 - HsTC2 DNA Tc2 2 1900 1757 1993 131 7 23 chr10 81067612 81067917 -64521371 + AluSx SINE Alu 1 300 -12 1495 202 64 19 chr10 81067917 81068186 -64521102 - HsTC2 DNA Tc2 -141 1757 1285 3548 162 19 3 chr10 81068661 81069280 -64520008 + Tigger7 DNA MER2_type 1 629 -1858 2201 114 10 0 chr10 81069282 81069580 -64519708 + AluSx SINE Alu 1 301 -11 340 282 55 9 chr10 81071229 81071339 -64517949 - HAL1b LINE L1 -948 400 286 2273 74 0 28 chr10 81072541 81072866 -64516422 - L1PA6 LINE L1 -10 6144 5829 7722 46 1 6 chr10 81072867 81073906 -64515382 - L1P LINE L1 -2303 3843 2810 183 326 125 56 chr10 81074436 81074580 -64514708 - L2 LINE L2 0 3272 3119 1494 136 47 8 chr10 81075158 81075393 -64513895 - AluSg/x SINE Alu 0 310 67 1849 180 11 3 chr10 81077747 81078120 -64511168 - L1P3 LINE L1 -5758 703 10 1924 162 16 0 chr10 81078122 81078425 -64510863 - AluJo SINE Alu -4 308 1 263 237 144 31 chr10 81080030 81080127 -64509161 - MIR3 SINE MIR -9 199 92 415 206 59 20 chr10 81080376 81080478 -64508810 + MIR SINE MIR 90 195 -67 1024 163 0 0 chr10 81080491 81080651 -64508637 + AluJb SINE Alu 139 298 -14 333 0 0 0 chr10 81081590 81081627 -64507661 + (TG)n Simple_repeat Simple_repeat 2 38 0 775 202 0 0 chr10 81081631 81081760 -64507528 - FLAM_C SINE Alu 0 133 5 1799 146 13 26 chr10 81081856 81082158 -64507130 - AluJb SINE Alu -12 300 3 329 115 0 16 chr10 81082328 81082389 -64506899 + (GA)n Simple_repeat Simple_repeat 1 60 0 1521 118 4 44 chr10 81082526 81082798 -64506490 + AluSx SINE Alu 1 261 -51 187 320 0 0 chr10 81084001 81084051 -64505237 - L2 LINE L2 -2 3270 3221 297 273 0 0 chr10 81085073 81085139 -64504149 + MIR SINE MIR 46 111 -151 222 200 0 0 chr10 81085145 81085185 -64504103 + L3 LINE CR1 1536 1575 -2 1468 137 56 72 chr10 81086846 81087275 -64502013 - L1MCa LINE L1 -3949 2477 2158 2099 151 0 10 chr10 81087277 81087582 -64501706 + AluJb SINE Alu 1 302 -10 1247 157 15 42 chr10 81087582 81087719 -64501569 + L1MB7 LINE L1 5598 5726 -458 2029 128 3 13 chr10 81087719 81088017 -64501271 + AluSx SINE Alu 1 295 -17 1247 157 15 42 chr10 81088017 81088140 -64501148 + L1MB7 LINE L1 5726 5851 -333 547 509 92 0 chr10 81088140 81088411 -64500877 - AluSx SINE Alu -6 296 1 1747 166 0 0 chr10 81088811 81089076 -64500212 + AluSx SINE Alu 3 267 -45 270 0 0 0 chr10 81089092 81089122 -64500166 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 344 319 72 14 chr10 81089494 81089632 -64499656 - L2 LINE L2 -41 3231 3086 480 333 208 29 chr10 81089823 81090406 -64498882 - L2 LINE L2 -497 2817 2131 1727 120 33 7 chr10 81090654 81090930 -64498358 - AluSg SINE Alu 0 310 28 1796 109 117 7 chr10 81091095 81091369 -64497919 - AluSx SINE Alu -8 304 1 506 163 0 0 chr10 81092637 81092717 -64496571 + AluJ/FLAM SINE Alu 2 81 -231 1056 128 191 15 chr10 81094403 81094607 -64494681 - Tigger3(Golem) DNA MER2_type 0 3029 2790 289 218 36 0 chr10 81094608 81094663 -64494625 - Tigger3(Golem) DNA MER2_type -2972 57 1 1564 104 5 22 chr10 81095001 81095223 -64494065 + AluSq SINE Alu 1 218 -95 675 213 75 23 chr10 81095373 81095547 -64493741 - MER58A DNA MER1_type -38 186 4 1775 264 158 24 chr10 81095554 81096468 -64492820 + L2 LINE L2 1661 2696 -618 337 209 175 25 chr10 81097369 81097534 -64491754 + MIR SINE MIR 37 224 -38 244 292 14 0 chr10 81098167 81098239 -64491049 - L3 LINE CR1 -15 1562 1490 1323 204 63 24 chr10 81098389 81098735 -64490553 - MLT1E1 LTR MaLR -2 652 215 6452 63 3 29 chr10 81098841 81100443 -64488845 - L1PA6 LINE L1 -286 5868 4315 432 184 18 9 chr10 81101042 81101151 -64488137 + (CA)n Simple_repeat Simple_repeat 1 110 0 557 205 190 34 chr10 81101265 81101470 -64487818 + MIR SINE MIR 20 256 -6 237 183 0 0 chr10 81102989 81103049 -64486239 + (TA)n Simple_repeat Simple_repeat 1 60 0 382 261 175 0 chr10 81105286 81105466 -64483822 - MIR SINE MIR -14 248 33 667 59 0 0 chr10 81105574 81105659 -64483629 + AluS SINE Alu 1 85 -228 13044 94 14 21 chr10 81105780 81107784 -64481504 + L1P LINE L1 730 2718 -3428 269 334 84 28 chr10 81107939 81108259 -64481029 - L2 LINE L2 -736 2578 2241 1474 123 0 0 chr10 81109207 81109410 -64479878 - AluSg/x SINE Alu 0 312 110 290 235 105 52 chr10 81110141 81110294 -64478994 - MER5A DNA MER1_type -22 167 7 318 26 0 0 chr10 81110295 81110334 -64478954 + (GA)n Simple_repeat Simple_repeat 1 39 0 443 296 104 50 chr10 81110901 81111550 -64477738 - L1M4 LINE L1 -2099 4047 3435 2165 101 17 7 chr10 81111550 81111838 -64477450 + AluSq SINE Alu 1 291 -22 443 296 104 50 chr10 81111838 81112419 -64476869 - L1M4 LINE L1 -2711 3435 2750 830 204 0 43 chr10 81112575 81112761 -64476527 + AluJo SINE Alu 7 184 -128 225 45 45 75 chr10 81112854 81112921 -64476367 + (TCTCC)n Simple_repeat Simple_repeat 2 66 0 381 256 28 50 chr10 81112986 81113233 -64476055 + CT-rich Low_complexity Low_complexity 1 241 0 2322 93 0 3 chr10 81115038 81115327 -64473961 + AluSc SINE Alu 1 288 -21 1586 202 40 54 chr10 81115677 81116069 -64473219 + MSTD LTR MaLR 1 395 -1 398 303 24 21 chr10 81116165 81116328 -64472960 + MIR SINE MIR 3 163 -45 440 129 11 86 chr10 81116331 81116424 -64472864 + MLT1B LTR MaLR 1 86 -304 213 333 24 24 chr10 81117318 81117444 -64471844 + L2 LINE L2 2722 2847 -467 219 287 73 67 chr10 81117833 81117983 -64471305 + L2 LINE L2 3161 3311 -2 315 168 35 182 chr10 81119269 81119472 -64469816 + L1MC4 LINE L1 7864 8036 -6 386 230 153 24 chr10 81119483 81119692 -64469596 + HAL1 LINE L1 1529 1764 -743 4115 226 20 48 chr10 81119936 81121059 -64468229 + L1M4 LINE L1 1 1092 -5450 1825 132 46 36 chr10 81121520 81121823 -64467465 - AluSx SINE Alu -6 306 1 1644 156 74 4 chr10 81122584 81122853 -64466435 + AluJo SINE Alu 7 294 -18 473 249 113 17 chr10 81123454 81123560 -64465728 + MIR SINE MIR 63 157 -105 1909 169 0 17 chr10 81123560 81123856 -64465432 + AluJo SINE Alu 1 291 -21 473 249 113 17 chr10 81123856 81123926 -64465362 + MIR SINE MIR 157 256 -6 2272 87 0 0 chr10 81124076 81124352 -64464936 + AluSx SINE Alu 1 276 -36 225 0 0 0 chr10 81124354 81124379 -64464909 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 328 301 9 9 chr10 81124814 81124927 -64464361 - MIR3 SINE MIR -50 158 46 469 227 27 0 chr10 81125673 81125783 -64463505 - MER81 DNA DNA -1 113 1 561 245 27 7 chr10 81126391 81126538 -64462750 - L1M4 LINE L1 -2394 5171 5022 346 146 29 29 chr10 81126549 81126652 -64462636 + CT-rich Low_complexity Low_complexity 4 106 0 626 228 0 0 chr10 81126664 81126787 -64462501 - FLAM_C SINE Alu -11 132 10 1484 218 104 28 chr10 81126789 81127461 -64461827 - L1M4 LINE L1 -3992 3573 2824 1862 141 54 3 chr10 81127461 81127758 -64461530 - AluSx SINE Alu 0 312 1 1484 218 104 28 chr10 81127758 81127892 -64461396 - L1M4 LINE L1 -4741 2824 2702 868 182 11 28 chr10 81127900 81128076 -64461212 - LTR9 LTR ERV1 -83 529 357 737 163 56 19 chr10 81128076 81128236 -64461052 - HUERS-P3 LTR ERV1 -8392 527 362 259 247 13 26 chr10 81128354 81128431 -64460857 - MIR SINE MIR -67 195 120 352 61 0 0 chr10 81128612 81128661 -64460627 - MADE1 DNA Mariner -5 75 27 555 290 21 16 chr10 81128990 81129176 -64460112 - MER117 DNA MER1_type 0 197 11 418 210 41 142 chr10 81129555 81129774 -64459514 - MER117 DNA MER1_type 0 197 1 355 160 53 0 chr10 81130310 81130385 -64458903 + MIR SINE MIR 113 191 -71 811 212 22 50 chr10 81130512 81130734 -64458554 - MIR SINE MIR -16 246 31 1160 245 32 20 chr10 81130944 81131358 -64457930 - L1PA15-16 LINE L1 -3838 3011 2592 2327 103 0 0 chr10 81133360 81133651 -64455637 - AluSx SINE Alu -21 291 1 500 271 7 14 chr10 81133711 81133851 -64455437 + L2 LINE L2 2682 2820 -494 423 291 170 6 chr10 81133875 81134040 -64455248 - L1M4 LINE L1 -2608 3538 3347 2369 73 28 0 chr10 81134042 81134328 -64454960 - AluSc SINE Alu -15 294 1 1901 138 0 21 chr10 81134404 81134695 -64454593 - AluJb SINE Alu -27 285 1 180 311 0 0 chr10 81134741 81134786 -64454502 + L2 LINE L2 3170 3214 -99 561 70 93 0 chr10 81134967 81135053 -64454235 - AluSc SINE Alu -14 295 202 3333 250 54 26 chr10 81135390 81136778 -64452510 + L1ME LINE L1 3 1427 -4653 410 348 59 8 chr10 81137072 81137308 -64451980 - MIR SINE MIR -1 261 14 1437 184 134 50 chr10 81138454 81138861 -64450427 + L1ME2 LINE L1 5724 6161 -3 250 167 0 0 chr10 81138910 81138952 -64450336 - Alu SINE Alu -9 292 251 684 128 0 0 chr10 81139052 81139154 -64450134 + AluSg/x SINE Alu 197 298 -11 997 211 8 8 chr10 81139155 81139406 -64449882 + L1M4 LINE L1 1338 1588 -4954 1549 140 22 0 chr10 81139406 81139634 -64449654 + AluSg/x SINE Alu 78 310 0 1000 240 128 0 chr10 81139650 81139946 -64449342 + L1M4 LINE L1 2610 2943 -3701 1967 279 64 25 chr10 81139950 81140577 -64448711 + L1M2c LINE L1 7 657 -6132 3627 204 46 13 chr10 81140928 81141915 -64447373 + L1M2c LINE L1 1270 2270 -4519 936 162 12 17 chr10 81141916 81142089 -64447199 + LTR9 LTR ERV1 441 612 0 219 69 0 0 chr10 81143358 81143387 -64445901 + (T)n Simple_repeat Simple_repeat 1 29 0 189 254 36 18 chr10 81143911 81143966 -64445322 - MIR SINE MIR -66 142 87 321 268 179 62 chr10 81144715 81144977 -64444311 - MLT1F LTR MaLR 0 542 249 1355 60 0 45 chr10 81145353 81145552 -64443736 + AluY SINE Alu 20 209 -102 282 29 0 0 chr10 81145688 81145723 -64443565 + (TG)n Simple_repeat Simple_repeat 2 36 0 2126 116 0 3 chr10 81145830 81146133 -64443155 - AluSq SINE Alu -11 302 1 2052 110 19 19 chr10 81146613 81146922 -64442366 - AluSq SINE Alu -4 309 1 845 122 122 72 chr10 81146922 81147001 -64442287 + MER46A DNA MER2_type 46 120 -2611 1882 151 3 3 chr10 81147001 81147299 -64441989 - AluJo SINE Alu -14 298 1 845 122 122 72 chr10 81147299 81147399 -64441889 + MER46A DNA MER2_type 120 234 -2 261 0 0 0 chr10 81147988 81148017 -64441271 + (A)n Simple_repeat Simple_repeat 1 29 0 205 387 36 0 chr10 81148071 81148182 -64441106 - L2 LINE L2 -207 3065 2951 267 289 13 0 chr10 81148667 81148743 -64440545 - MIR SINE MIR 0 262 186 267 261 11 11 chr10 81148855 81148943 -64440345 + (CATATA)n Simple_repeat Simple_repeat 3 90 0 38 61 0 0 chr10 81148973 81149039 -64440249 + AT_rich Low_complexity Low_complexity 1 66 0 242 304 0 33 chr10 81149047 81149139 -64440149 - L1ME1 LINE L1 -30 6136 6048 256 385 15 0 chr10 81149583 81149713 -64439575 - L3b LINE CR1 -264 1319 1188 610 237 10 101 chr10 81149715 81149922 -64439366 - MER102b DNA MER1_type 0 341 154 1791 165 0 22 chr10 81150572 81150887 -64438401 + AluJb SINE Alu 1 308 -4 364 66 16 16 chr10 81150891 81150952 -64438336 + (GGGA)n Simple_repeat Simple_repeat 2 62 0 253 212 26 88 chr10 81152595 81152708 -64436580 - MIR3 SINE MIR -9 199 94 802 125 67 0 chr10 81155241 81155361 -64433927 - AluSq/x SINE Alu -184 128 1 1088 184 28 28 chr10 81156697 81156915 -64432373 + MER20 DNA MER1_type 2 219 0 2966 86 86 14 chr10 81157758 81158191 -64431097 + MER4C LTR ERV1 1 464 -1 521 281 54 6 chr10 81159461 81159628 -64429660 - MIR SINE MIR -67 195 21 283 333 80 0 chr10 81160470 81160608 -64428680 - MIR SINE MIR -58 150 45 890 235 54 14 chr10 81160745 81160966 -64428322 - MIR SINE MIR 0 262 33 453 199 59 59 chr10 81162891 81163027 -64426261 + L2 LINE L2 3159 3294 -19 575 264 137 22 chr10 81163027 81163254 -64426034 + MER102a DNA MER1_type 78 330 0 182 282 51 26 chr10 81163820 81163898 -64425390 - MIR SINE MIR 0 262 183 401 280 72 21 chr10 81164057 81164234 -64425054 + MIR3 SINE MIR 30 165 -43 281 351 70 16 chr10 81165635 81165820 -64423468 - L2 LINE L2 -1 3312 3118 560 62 25 38 chr10 81166005 81166085 -64423203 + MADE1 DNA Mariner 2 80 0 429 280 30 0 chr10 81166112 81166244 -64423044 - MIR SINE MIR -118 144 9 933 192 18 31 chr10 81166290 81166514 -64422774 - MIR SINE MIR -26 236 16 462 333 65 8 chr10 81166531 81166777 -64422511 - L2 LINE L2 -431 2883 2624 180 333 57 7 chr10 81166927 81167068 -64422220 - L2 LINE L2 -956 2358 2211 * 284 259 148 0 chr10 81167021 81167129 -64422159 + L3 LINE CR1 1384 1507 -70 718 217 133 31 chr10 81168146 81168372 -64420916 + MIR SINE MIR 14 262 0 425 268 8 6 chr10 81168371 81168537 -64420751 - MIR SINE MIR -105 157 16 * 284 315 117 0 chr10 81169283 81169394 -64419894 - MIR SINE MIR -14 248 125 304 372 41 0 chr10 81169797 81169918 -64419370 + MIR SINE MIR 20 145 -63 381 372 9 13 chr10 81170975 81171206 -64418082 - MER102a DNA MER1_type 0 330 101 217 257 110 64 chr10 81171316 81171425 -64417863 - MIR SINE MIR -111 151 38 239 274 20 39 chr10 81172894 81173047 -64416241 + GA-rich Low_complexity Low_complexity 3 152 0 2273 76 3 22 chr10 81173524 81173840 -64415448 + AluSg SINE Alu 1 310 0 2209 91 0 7 chr10 81174514 81174821 -64414467 - AluSc SINE Alu -4 305 1 226 248 40 50 chr10 81175895 81175996 -64413292 - MIR SINE MIR -71 137 38 1343 102 5 5 chr10 81176921 81177108 -64412180 - AluSc SINE Alu -15 294 108 278 252 236 24 chr10 81180695 81180822 -64408466 + MIR3 SINE MIR 3 156 -52 250 316 103 0 chr10 81181528 81181682 -64407606 + MIR SINE MIR 37 216 -46 336 295 107 0 chr10 81182274 81182386 -64406902 - MIR3 SINE MIR -2 206 83 1058 189 173 24 chr10 81183108 81183479 -64405809 - LTR37A LTR ERV1 0 426 1 196 296 92 20 chr10 81184289 81184387 -64404901 + MIR3 SINE MIR 65 169 -39 206 297 30 40 chr10 81190196 81190297 -64398991 - MIR3 SINE MIR -99 109 10 1634 197 0 3 chr10 81190603 81190903 -64398385 - AluJb SINE Alu -13 299 1 433 269 137 14 chr10 81191069 81191281 -64398007 + Charlie8 DNA MER1_type 1 238 -2179 473 273 0 0 chr10 81192053 81192163 -64397125 + MIR SINE MIR 43 152 -110 721 318 69 50 chr10 81192479 81192942 -64396346 + L2 LINE L2 2841 3312 -1 679 295 45 0 chr10 81193034 81193234 -64396054 + MIR SINE MIR 48 256 -6 204 97 0 0 chr10 81193595 81193626 -64395662 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 378 135 54 27 chr10 81193626 81193700 -64395588 - MER51B LTR ERV1 -91 286 211 195 42 0 0 chr10 81193959 81193983 -64395305 + (TTTTG)n Simple_repeat Simple_repeat 1 24 0 206 250 97 14 chr10 81194601 81194673 -64394615 + MIR SINE MIR 69 146 -62 1472 130 0 22 chr10 81194675 81194906 -64394382 + AluJo SINE Alu 87 312 0 564 162 186 73 chr10 81195059 81195263 -64394025 - ORSL DNA AcHobo -46 229 3 526 310 52 17 chr10 81196715 81196889 -64392399 + MIR3 SINE MIR 14 193 -15 199 204 45 0 chr10 81198160 81198204 -64391084 - L2 LINE L2 -10 3262 3217 254 292 150 0 chr10 81199683 81199796 -64389492 + MER94 DNA DNA 1 130 -4 196 292 45 11 chr10 81201004 81201093 -64388195 + MIR SINE MIR 34 125 -83 347 55 0 18 chr10 81201220 81201275 -64388013 + (GGAA)n Simple_repeat Simple_repeat 1 54 0 324 264 14 0 chr10 81201469 81201541 -64387747 - MIR SINE MIR -1 261 189 291 260 192 0 chr10 81203513 81203617 -64385671 - MIR3 SINE MIR -23 185 62 914 273 72 33 chr10 81204138 81204535 -64384753 - Charlie8 DNA MER1_type -1022 1395 1 642 206 27 76 chr10 81204701 81204885 -64384403 + MER5B DNA MER1_type 2 176 -2 333 349 86 0 chr10 81207695 81207847 -64381441 - MIR SINE MIR -7 255 91 2190 92 0 0 chr10 81207932 81208225 -64381063 - AluSx SINE Alu -19 293 1 1802 178 0 9 chr10 81209451 81209816 -64379472 + AluJb SINE Alu 1 362 0 245 227 22 81 chr10 81210808 81210908 -64378380 - MLT1H LTR MaLR -393 156 21 2342 94 0 0 chr10 81210923 81211230 -64378058 - AluSc SINE Alu 0 309 3 304 304 59 15 chr10 81211367 81211502 -64377786 - MIR SINE MIR -1 261 121 1387 196 36 14 chr10 81211504 81211779 -64377509 - MSTD LTR MaLR 0 396 116 226 136 0 0 chr10 81211818 81211862 -64377426 - MSTD LTR MaLR -217 179 136 1131 154 11 15 chr10 81211958 81212190 -64377098 - MSTD LTR MaLR -221 236 1 215 263 53 0 chr10 81212200 81212257 -64377031 - MIR SINE MIR -168 94 35 568 302 167 19 chr10 81213017 81213275 -64376013 + L3 LINE CR1 1267 1562 -15 283 253 0 19 chr10 81214110 81214209 -64375079 - MIR SINE MIR -97 111 17 672 294 94 0 chr10 81215507 81215742 -64373546 - MIR SINE MIR 0 262 6 253 321 48 30 chr10 81219304 81219472 -64369816 + MIR SINE MIR 80 250 -12 180 0 0 0 chr10 81222076 81222096 -64367192 + (TCC)n Simple_repeat Simple_repeat 3 22 0 647 173 33 13 chr10 81223548 81223698 -64365590 + MER103 DNA DNA 13 165 -1 1369 241 40 50 chr10 81224578 81224956 -64364332 + MLT1A2 LTR MaLR 1 374 0 303 252 122 41 chr10 81224962 81225109 -64364179 + MIR3 SINE MIR 13 171 -37 2453 149 10 8 chr10 81225175 81225570 -64363718 - MLT1C LTR MaLR 0 467 72 29 0 0 0 chr10 81226384 81226413 -64362875 + AT_rich Low_complexity Low_complexity 1 29 0 250 316 58 0 chr10 81226423 81226562 -64362726 - MER103 DNA DNA -12 154 8 1098 170 59 17 chr10 81228140 81228416 -64360872 + MER1B DNA MER1_type 1 339 0 305 79 0 0 chr10 81229942 81229980 -64359308 - tRNA-Trp tRNA tRNA -37 38 1 259 354 102 0 chr10 81230020 81230147 -64359141 - MIR SINE MIR -77 185 46 232 307 198 0 chr10 81230539 81230640 -64358648 - MIR SINE MIR -85 177 57 1162 138 22 31 chr10 81231430 81231752 -64357536 + L1MB8 LINE L1 5789 6178 0 380 263 86 86 chr10 81231942 81232314 -64356974 - L1ME3A LINE L1 -230 5940 5569 212 317 0 17 chr10 81232322 81232382 -64356906 - MIR SINE MIR -62 146 88 227 324 0 0 chr10 81232989 81233057 -64356231 + MER5A DNA MER1_type 4 71 -118 303 309 109 6 chr10 81233071 81233236 -64356052 - L2 LINE L2 -491 2823 2642 185 343 19 37 chr10 81234870 81234978 -64354310 + L2 LINE L2 2656 2761 -553 517 249 60 49 chr10 81234984 81235169 -64354119 - MER117 DNA MER1_type -3 194 8 832 269 98 24 chr10 81235374 81235721 -64353567 + MLT1J LTR MaLR 13 332 -114 236 325 12 12 chr10 81237005 81237085 -64352203 - L2 LINE L2 -4 3268 3189 297 232 85 0 chr10 81237281 81237363 -64351925 + MIR SINE MIR 156 244 -18 537 328 84 8 chr10 81238219 81238457 -64350831 - MIR SINE MIR -3 259 4 273 283 222 0 chr10 81239617 81239716 -64349572 - L2 LINE L2 0 3272 3152 354 309 73 0 chr10 81240911 81241021 -64348267 + MIR SINE MIR 143 260 -2 * 365 271 19 19 chr10 81241015 81241122 -64348166 - MIR SINE MIR -107 155 49 546 286 14 55 chr10 81241148 81241365 -64347923 + Charlie8 DNA MER1_type 11 218 -2199 297 327 19 10 chr10 81241560 81241664 -64347624 - MIR SINE MIR -88 120 16 730 259 45 94 chr10 81242234 81242608 -64346680 - L2 LINE L2 -100 3213 2858 1073 306 59 12 chr10 81242736 81243154 -64346134 + LTR16A LTR ERVL 6 454 -3 257 341 78 22 chr10 81243172 81243373 -64345915 - MIR SINE MIR -56 206 3 2794 169 54 24 chr10 81243522 81244025 -64345263 + MLT2B1 LTR ERVL 1 518 -2 274 325 138 8 chr10 81244029 81244152 -64345136 - L2 LINE L2 -510 2804 2666 341 254 121 62 chr10 81245072 81245220 -64344068 + MIR SINE MIR 6 157 -56 532 294 67 10 chr10 81246896 81247090 -64342198 + MIR SINE MIR 24 228 -34 689 319 110 53 chr10 81247893 81248534 -64340754 - L1M4 LINE L1 -813 5831 1040 783 225 14 57 chr10 81248935 81249144 -64340144 + MER63A DNA MER1_type 9 208 -2 412 341 153 25 chr10 81249168 81249757 -64339531 + L2 LINE L2 2301 2964 -350 309 318 142 8 chr10 81250639 81250785 -64338503 + MIR SINE MIR 5 169 -53 900 246 23 54 chr10 81251348 81251603 -64337685 + MIR SINE MIR 10 261 -1 318 265 182 0 chr10 81251974 81252106 -64337182 + MIR3 SINE MIR 48 203 -5 294 250 0 36 chr10 81252818 81252902 -64336386 + GA-rich Low_complexity Low_complexity 1 81 0 859 219 61 0 chr10 81253818 81254014 -64335274 + MIR SINE MIR 36 243 -19 608 291 91 4 chr10 81254082 81254312 -64334976 + MIR SINE MIR 1 250 -12 311 252 30 61 chr10 81254384 81254515 -64334773 + MIR SINE MIR 18 144 -64 2169 98 7 0 chr10 81254537 81254832 -64334456 + AluSx SINE Alu 1 297 -15 333 0 0 0 chr10 81255569 81255606 -64333682 + (TG)n Simple_repeat Simple_repeat 1 37 0 401 131 12 0 chr10 81255606 81255690 -64333598 + GA-rich Low_complexity Low_complexity 2 86 0 725 318 35 16 chr10 81256970 81257225 -64332063 + MIR SINE MIR 3 262 0 316 304 87 14 chr10 81259253 81259391 -64329897 + MIR SINE MIR 103 250 -12 211 357 71 0 chr10 81260473 81260599 -64328689 + MIR SINE MIR 128 262 0 247 258 89 81 chr10 81261179 81261303 -64327985 + MIR3 SINE MIR 64 188 -20 * 874 235 68 9 chr10 81261300 81261521 -64327767 + MIR SINE MIR 29 262 0 373 223 79 29 chr10 81261881 81262020 -64327268 + L2 LINE L2 3168 3313 0 21 57 0 0 chr10 81262639 81262674 -64326614 + AT_rich Low_complexity Low_complexity 1 35 0 1486 148 0 38 chr10 81262713 81262976 -64326312 + AluJo SINE Alu 30 282 -30 900 226 20 5 chr10 81263137 81263336 -64325952 - MIR SINE MIR -59 203 2 254 330 22 11 chr10 81263447 81263538 -64325750 - L3b LINE CR1 -132 1451 1360 231 363 0 0 chr10 81263538 81263618 -64325670 + MER117 DNA MER1_type 1 80 -117 468 245 252 0 chr10 81267269 81267408 -64321880 - MIR SINE MIR -25 237 64 281 349 30 8 chr10 81268076 81268208 -64321080 - MIR SINE MIR -55 153 19 290 289 72 0 chr10 81268649 81268746 -64320542 - L2 LINE L2 -1 3271 3168 227 355 65 0 chr10 81268765 81268858 -64320430 - L2 LINE L2 -20 3252 3154 526 286 42 36 chr10 81268977 81269145 -64320143 - MIR SINE MIR -6 256 88 216 0 0 0 chr10 81269194 81269218 -64320070 + (TTTAA)n Simple_repeat Simple_repeat 2 25 0 1767 154 31 3 chr10 81269218 81269504 -64319784 - AluJb SINE Alu -18 294 1 907 212 69 0 chr10 81269985 81270188 -64319100 + MER20 DNA MER1_type 1 217 -2 481 352 56 9 chr10 81270384 81270600 -64318688 - MIR SINE MIR -12 250 25 293 241 40 13 chr10 81270974 81271069 -64318219 - MIR SINE MIR -39 169 71 915 226 26 0 chr10 81271166 81271356 -64317932 - MER63A DNA MER1_type -13 197 3 489 216 134 8 chr10 81271492 81271626 -64317662 - MER117 DNA MER1_type -43 154 4 228 318 26 40 chr10 81272276 81272427 -64316861 + MLT1K LTR MaLR 20 168 -420 242 273 50 72 chr10 81273354 81273493 -64315795 - MIR SINE MIR -46 216 81 613 75 0 0 chr10 81274001 81274081 -64315207 - MADE1 DNA Mariner 0 80 1 429 266 36 58 chr10 81274129 81274268 -64315020 - MIR SINE MIR -48 214 79 421 265 80 33 chr10 81274332 81274483 -64314805 - MIR SINE MIR -103 159 2 1085 208 38 4 chr10 81274801 81275037 -64314251 + MIR SINE MIR 15 258 -4 2395 76 0 3 chr10 81275161 81275465 -64313823 - AluSg SINE Alu -7 303 1 261 286 218 15 chr10 81275467 81275600 -64313688 - MIR SINE MIR -36 226 67 1273 163 102 1 chr10 81275613 81275878 -64313410 - MER1B DNA MER1_type 0 339 89 1091 254 6 75 chr10 81276866 81277225 -64312063 - MER102b DNA MER1_type -1 340 7 195 289 40 26 chr10 81277256 81277332 -64311956 + L2 LINE L2 3237 3313 0 383 323 90 19 chr10 81278112 81278337 -64310951 - MIR SINE MIR -21 241 3 184 357 0 0 chr10 81278388 81278444 -64310844 - MIR SINE MIR -110 98 43 269 270 20 9 chr10 81278473 81278628 -64310660 - MER117 DNA MER1_type -2 195 1 1601 158 31 24 chr10 81278726 81279017 -64310271 - AluJb SINE Alu -19 293 1 412 348 139 35 chr10 81279291 81279774 -64309514 - L1ME4a LINE L1 -1 6120 5588 205 291 0 70 chr10 81280717 81280803 -64308485 - L2 LINE L2 -7 3265 3186 * 631 277 49 5 chr10 81280801 81280985 -64308303 + MIR SINE MIR 71 262 0 393 262 89 98 chr10 81281009 81281286 -64308002 - L2 LINE L2 -129 3184 2884 902 197 83 0 chr10 81281286 81281346 -64307942 - MER3 DNA MER1_type 0 209 155 2007 139 0 16 chr10 81281346 81281690 -64307598 + AluSx SINE Alu 1 312 0 902 197 83 0 chr10 81281690 81281822 -64307466 - MER3 DNA MER1_type -54 155 1 393 262 89 98 chr10 81281822 81281967 -64307321 - L2 LINE L2 -429 2884 2739 568 226 37 53 chr10 81282292 81282568 -64306720 + LTR16A LTR ERVL 18 354 -96 263 321 107 14 chr10 81282902 81283042 -64306246 - MIR SINE MIR -109 153 1 23 0 0 0 chr10 81283783 81283806 -64305482 + AT_rich Low_complexity Low_complexity 1 23 0 444 279 144 42 chr10 81284776 81284991 -64304297 + MIR SINE MIR 26 262 0 212 219 14 55 chr10 81285754 81285827 -64303461 + GA-rich Low_complexity Low_complexity 2 71 0 180 271 34 0 chr10 81285837 81285896 -64303392 - MIR SINE MIR -19 243 183 334 299 85 30 chr10 81285966 81286130 -64303158 + MIR SINE MIR 1 173 -89 200 307 0 13 chr10 81286199 81286274 -64303014 + GA-rich Low_complexity Low_complexity 6 79 0 210 302 69 26 chr10 81287277 81287393 -64301895 - L2 LINE L2 -45 3227 3107 333 317 103 0 chr10 81287406 81287551 -64301737 - MER5A DNA MER1_type 0 189 30 2330 98 0 0 chr10 81287812 81288119 -64301169 + AluSx SINE Alu 6 312 0 565 245 28 0 chr10 81288667 81288810 -64300478 - MIR SINE MIR -5 257 111 197 237 0 0 chr10 81288919 81288957 -64300331 - MIR SINE MIR -141 121 84 193 298 0 0 chr10 81288982 81289029 -64300259 - L2 LINE L2 -8 3264 3218 388 291 73 12 chr10 81289050 81289215 -64300073 + L2 LINE L2 2874 3048 -224 673 279 15 72 chr10 81289555 81289687 -64299601 - MIR SINE MIR -4 258 147 959 199 56 10 chr10 81289687 81289883 -64299405 + MER3 DNA MER1_type 5 209 0 673 279 15 72 chr10 81289883 81290012 -64299276 - MIR SINE MIR -115 147 12 229 255 117 0 chr10 81290150 81290244 -64299044 + MIR3 SINE MIR 103 207 -1 594 274 131 48 chr10 81290874 81290891 -64298397 + L2 LINE L2 2673 2687 -585 1926 153 47 36 chr10 81290891 81291251 -64298037 - THE1B LTR MaLR 0 364 1 594 274 131 48 chr10 81291251 81291788 -64297500 + L2 LINE L2 2687 3272 0 206 276 53 61 chr10 81292032 81292260 -64297028 - L2 LINE L2 -212 3060 2835 915 297 90 25 chr10 81293118 81293628 -64295660 + L2 LINE L2 2436 2977 -336 364 315 77 51 chr10 81293763 81293827 -64295461 + L2 LINE L2 3021 3082 -231 378 159 0 0 chr10 81293827 81293890 -64295398 + L1MA9 LINE L1 6245 6307 -5 364 315 77 51 chr10 81293890 81294098 -64295190 + L2 LINE L2 3082 3300 -13 222 118 0 0 chr10 81294098 81294132 -64295156 + (TGAA)n Simple_repeat Simple_repeat 1 34 0 205 356 62 14 chr10 81294312 81294458 -64294830 - MIR SINE MIR 0 262 110 191 237 53 40 chr10 81294701 81294777 -64294511 + MIR3 SINE MIR 3 79 -129 * 525 289 54 6 chr10 81294769 81294935 -64294353 - MIR SINE MIR -12 250 77 183 370 46 0 chr10 81294993 81295101 -64294187 + MIR3 SINE MIR 77 189 -19 1155 136 23 0 chr10 81395474 81395650 -64193638 - MER3 DNA MER1_type -27 182 3 1032 151 0 12 chr10 81396794 81396966 -64192322 + AluSg/x SINE Alu 127 296 -14 276 178 27 27 chr10 81396970 81397043 -64192245 + L1MEc LINE L1 2218 2290 -4106 1185 142 75 9 chr10 81400285 81400497 -64188791 + AluSg/x SINE Alu 85 310 0 295 261 0 0 chr10 81400502 81400571 -64188717 + MLT1J LTR MaLR 443 511 0 968 114 0 0 chr10 81400951 81401074 -64188214 + FLAM_C SINE Alu 1 123 -10 185 235 20 20 chr10 81401930 81401981 -64187307 + L2 LINE L2 3136 3186 -86 192 179 26 0 chr10 81402568 81402607 -64186681 + L2 LINE L2 3269 3308 -5 363 244 0 35 chr10 81402938 81403024 -64186264 - L2 LINE L2 -6 3307 3225 2328 86 0 0 chr10 81403177 81403476 -64185812 + AluSc SINE Alu 3 301 0 561 301 104 16 chr10 81403594 81403903 -64185385 - MLT1L LTR MaLR -150 465 130 1972 186 34 17 chr10 81405446 81405855 -64183433 + L1ME1 LINE L1 5746 6161 -5 808 236 87 0 chr10 81405885 81406046 -64183242 + FAM SINE Alu 1 46 -3 444 182 45 34 chr10 81406065 81406153 -64183135 + MER2 DNA MER2_type 1 89 -150 1141 175 13 21 chr10 81406217 81406451 -64182837 + L1ME2 LINE L1 5688 5919 -247 274 273 30 0 chr10 81406456 81406522 -64182766 + MER2 DNA MER2_type 278 345 0 305 154 0 31 chr10 81406824 81406889 -64182399 - MLT1B LTR MaLR -164 226 164 1421 194 41 0 chr10 81406893 81407161 -64182127 - AluJo SINE Alu -1 311 33 993 117 76 41 chr10 81407161 81407332 -64181956 - MLT1B LTR MaLR -213 177 1 455 302 63 14 chr10 81408314 81408507 -64180781 - MIR SINE MIR -32 230 31 1337 221 39 25 chr10 81408978 81409263 -64180025 + AluJo SINE Alu 1 289 -13 221 286 137 11 chr10 81409601 81409783 -64179505 - L2 LINE L2 -210 3062 2858 239 314 92 39 chr10 81409838 81409991 -64179297 - MIR3 SINE MIR -45 163 3 8075 52 6 0 chr10 81410479 81412060 -64177228 - L1PA6 LINE L1 -227 5927 4341 183 245 20 20 chr10 81412250 81412299 -64176989 - L2 LINE L2 -4 3309 3261 218 105 26 0 chr10 81413378 81413416 -64175872 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 1617 143 0 4 chr10 81414703 81414940 -64174348 - MER46A DNA MER2_type 0 236 1 363 288 76 8 chr10 81415126 81415244 -64174044 + MIR SINE MIR 28 153 -55 243 207 103 0 chr10 81415252 81415310 -64173978 - MER113 DNA MER1_type? 0 521 458 2036 162 22 25 chr10 81415402 81415651 -64173637 - THE1B LTR MaLR 0 364 115 438 108 0 0 chr10 81415651 81415716 -64173572 + (CAG)n Simple_repeat Simple_repeat 2 66 0 2036 162 22 25 chr10 81415716 81415831 -64173457 - THE1B LTR MaLR -249 115 1 467 184 10 10 chr10 81415836 81415939 -64173349 - MER113 DNA MER1_type? -408 113 11 585 267 23 68 chr10 81416220 81416441 -64172847 + L1ME2 LINE L1 5921 6131 -33 260 255 67 53 chr10 81416479 81416687 -64172601 + L1MC4 LINE L1 7832 8042 0 247 305 9 19 chr10 81416995 81417100 -64172188 + (TA)n Simple_repeat Simple_repeat 2 105 0 364 239 205 49 chr10 81417492 81417697 -64171591 - MIR SINE MIR -6 256 20 207 186 0 0 chr10 81418653 81418696 -64170592 + GA-rich Low_complexity Low_complexity 2 44 0 843 231 109 20 chr10 81418724 81418971 -64170317 + MLT1J LTR MaLR 4 272 -239 180 293 103 0 chr10 81420222 81420280 -64169008 + L2 LINE L2 2367 2430 -884 403 328 56 56 chr10 81420670 81420815 -64168473 - L1M4 LINE L1 -2343 3803 3660 1997 164 38 55 chr10 81420815 81421212 -64168076 + MLT1B LTR MaLR 1 390 0 403 328 56 56 chr10 81421212 81421648 -64167640 - L1M4 LINE L1 -2486 3660 3217 999 200 0 0 chr10 81421671 81421841 -64167447 - AluSg/x SINE Alu -13 299 130 1914 142 18 0 chr10 81421870 81422151 -64167137 - AluSx SINE Alu -26 286 1 240 304 97 28 chr10 81422152 81422441 -64166847 - L1P LINE L1 -2979 3167 2859 1485 161 0 28 chr10 81424731 81424979 -64164309 + AluJb SINE Alu 59 299 -13 287 275 218 14 chr10 81424980 81425122 -64164166 + MIR3 SINE MIR 18 188 -20 201 39 0 0 chr10 81426896 81426922 -64162366 + (TCTCTG)n Simple_repeat Simple_repeat 2 27 0 2555 174 76 13 chr10 81427099 81427570 -64161718 - MLT1D LTR MaLR 0 505 5 265 186 31 21 chr10 81427856 81427953 -64161335 + CT-rich Low_complexity Low_complexity 2 99 0 1794 181 56 23 chr10 81428094 81428487 -64160801 + MSTB1 LTR MaLR 1 406 -26 260 140 269 86 chr10 81428863 81428956 -64160332 - MIR SINE MIR -123 139 30 441 123 12 43 chr10 81429443 81429457 -64159831 + (TA)n Simple_repeat Simple_repeat 1 14 -143 2449 122 43 66 chr10 81429457 81429650 -64159638 + Tigger2a DNA MER2_type 1 197 -2511 2059 94 6 69 chr10 81429650 81429969 -64159319 + AluSq SINE Alu 1 299 -14 2449 122 43 66 chr10 81429969 81430216 -64159072 + Tigger2a DNA MER2_type 197 431 -3 441 123 12 43 chr10 81430216 81430363 -64158925 + (TA)n Simple_repeat Simple_repeat 14 157 0 252 0 0 0 chr10 81430363 81430391 -64158897 + (GA)n Simple_repeat Simple_repeat 2 29 0 244 273 65 13 chr10 81430768 81430845 -64158443 - MIR3 SINE MIR -41 167 87 194 270 148 39 chr10 81431014 81431244 -64158044 - L2 LINE L2 -344 2970 2716 390 255 299 0 chr10 81432814 81432971 -64156317 + MIR SINE MIR 12 215 -47 640 249 67 54 chr10 81433246 81433543 -64155745 - L1ME4a LINE L1 -34 6087 5787 634 211 82 7 chr10 81434071 81434218 -64155070 + MIR3 SINE MIR 17 174 -34 319 286 0 0 chr10 81434314 81434398 -64154890 - MIR SINE MIR -92 170 87 656 164 29 21 chr10 81434613 81434753 -64154535 - MER20 DNA MER1_type -26 193 53 204 158 26 0 chr10 81435789 81435827 -64153461 + T-rich Low_complexity Low_complexity 2 40 0 205 138 0 0 chr10 81436031 81436060 -64153228 + (TG)n Simple_repeat Simple_repeat 2 30 0 326 183 256 0 chr10 81436333 81436415 -64152873 - MIR SINE MIR -62 146 44 324 256 26 0 chr10 81436492 81436570 -64152718 + MIR3 SINE MIR 88 167 -41 243 216 0 20 chr10 81436780 81436831 -64152457 + L2 LINE L2 3210 3259 -13 183 300 12 38 chr10 81437298 81437378 -64151910 - L2 LINE L2 -215 3057 2980 271 223 43 0 chr10 81440101 81440195 -64149093 + (TA)n Simple_repeat Simple_repeat 1 98 0 28 86 0 0 chr10 81440264 81440334 -64148954 + AT_rich Low_complexity Low_complexity 1 70 0 187 143 18 36 chr10 81440642 81440698 -64148590 + (TATG)n Simple_repeat Simple_repeat 4 58 0 510 335 34 11 chr10 81440747 81440926 -64148362 - MIR SINE MIR -72 190 8 1701 116 37 11 chr10 81441156 81441424 -64147864 - L1MA5A LINE L1 0 6297 6023 223 340 0 10 chr10 81442726 81442823 -64146465 + CT-rich Low_complexity Low_complexity 1 96 0 252 236 217 9 chr10 81443134 81443240 -64146048 + MIR SINE MIR 119 246 -16 28 29 0 0 chr10 81443607 81443642 -64145646 + AT_rich Low_complexity Low_complexity 1 35 0 367 229 25 179 chr10 81443718 81443997 -64145291 - MIR SINE MIR -3 259 24 24115 31 2 1 chr10 81444553 81448663 -64140625 - L1P1 LINE L1 -337 5818 1703 809 189 9 57 chr10 81448791 81449019 -64140269 - AluSg SINE Alu -91 219 3 590 153 162 0 chr10 81449075 81449186 -64140102 + FLAM_C SINE Alu 2 130 -3 194 206 103 59 chr10 81449387 81449455 -64139833 - MIR SINE MIR -102 106 36 400 274 92 64 chr10 81449743 81450100 -64139188 - L2 LINE L2 -19 3294 2928 391 179 250 14 chr10 81451271 81451411 -64137877 - MIR SINE MIR -8 254 82 492 301 153 14 chr10 81452528 81452737 -64136551 + MIR SINE MIR 18 255 -7 428 293 55 22 chr10 81452809 81452990 -64136298 + MER5A DNA MER1_type 1 187 -2 1514 163 145 21 chr10 81453233 81453558 -64135730 - MLT1A1 LTR MaLR 0 365 1 224 195 0 0 chr10 81454693 81454734 -64134554 - L2 LINE L2 -83 3230 3190 2383 91 0 0 chr10 81454828 81455125 -64134163 + AluY SINE Alu 1 297 -14 222 118 0 0 chr10 81455181 81455215 -64134073 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 350 214 56 0 chr10 81455229 81455318 -64133970 - L2 LINE L2 -38 3275 3182 181 200 93 67 chr10 81455347 81455422 -64133866 - L2 LINE L2 -341 2972 2896 346 224 47 0 chr10 81455426 81455511 -64133777 - L2 LINE L2 -43 3270 3182 181 200 93 67 chr10 81455540 81455615 -64133673 - L2 LINE L2 -341 2972 2896 346 224 47 0 chr10 81455619 81455704 -64133584 - L2 LINE L2 -43 3270 3182 181 200 93 67 chr10 81455733 81455808 -64133480 - L2 LINE L2 -341 2972 2896 346 224 47 0 chr10 81455812 81455897 -64133391 - L2 LINE L2 -43 3270 3182 180 205 96 60 chr10 81455926 81456009 -64133279 - L2 LINE L2 -341 2972 2887 * 322 235 47 0 chr10 81456005 81456090 -64133198 - L2 LINE L2 -43 3270 3182 848 294 108 35 chr10 81456178 81457087 -64132201 - L2 LINE L2 -479 2835 1861 511 278 114 37 chr10 81457124 81457579 -64131709 + L2 LINE L2 2554 3059 -213 428 266 87 17 chr10 81457672 81457845 -64131443 + MLT1H LTR MaLR 40 224 -325 317 258 67 0 chr10 81457955 81458044 -64131244 + MLT1G1 LTR MaLR 483 577 -18 1704 190 0 0 chr10 81458355 81458634 -64130654 + AluJo SINE Alu 1 279 -33 649 204 154 6 chr10 81458895 81459057 -64130231 + MER5A DNA MER1_type 4 189 0 280 298 62 31 chr10 81460241 81460402 -64128886 + L3 LINE CR1 651 816 -761 291 323 0 11 chr10 81460571 81460664 -64128624 + L3 LINE CR1 1056 1147 -430 209 232 36 0 chr10 81460799 81460855 -64128433 + L2 LINE L2 3253 3310 -3 294 238 50 12 chr10 81461098 81461178 -64128110 + MIR SINE MIR 19 101 -107 287 276 112 31 chr10 81462662 81462760 -64126528 + MIR SINE MIR 38 143 -65 260 276 58 0 chr10 81462859 81462946 -64126342 - L2 LINE L2 0 3272 3181 31471 71 8 3 chr10 81463355 81467447 -64121841 - L1P LINE L1 -2035 4111 1 231 264 48 80 chr10 81467502 81467627 -64121661 - MER5A DNA MER1_type -44 145 25 2415 241 89 47 chr10 81468363 81469850 -64119438 - L1MCc LINE L1 -4544 2578 833 1646 257 41 7 chr10 81470098 81470538 -64118750 - L1MCc LINE L1 -5952 471 17 253 287 91 42 chr10 81470546 81470689 -64118599 + L3 LINE CR1 1094 1243 -334 182 232 145 72 chr10 81470804 81470873 -64118415 - L2 LINE L2 -49 3223 3150 248 356 10 0 chr10 81470893 81470997 -64118291 + L3 LINE CR1 1333 1437 -140 323 236 38 38 chr10 81471011 81471121 -64118167 + MIR SINE MIR 46 154 -62 2135 250 127 32 chr10 81471513 81473029 -64116259 + L1ME LINE L1 127 1814 -4447 10397 115 10 16 chr10 81473167 81474678 -64114610 - L1P3 LINE L1 -4950 1511 10 2241 120 3 6 chr10 81474677 81475003 -64114285 + MSTA-int LTR MaLR 1327 1651 0 * 2266 123 73 25 chr10 81475003 81475411 -64113877 + MSTA LTR MaLR 1 428 0 442 334 98 17 chr10 81475417 81475827 -64113461 - L2 LINE L2 -973 2341 1899 325 306 162 47 chr10 81475864 81476524 -64112764 + L1MEd LINE L1 13 748 -5371 644 273 77 47 chr10 81476577 81477146 -64112142 + L1MEd LINE L1 850 1470 -4840 1220 160 134 110 chr10 81477146 81477527 -64111761 - MLT1B LTR MaLR 0 390 1 644 273 77 47 chr10 81477527 81477587 -64111701 + L1MEd LINE L1 1470 1527 -4783 307 262 60 34 chr10 81479530 81479679 -64109609 + MIR3 SINE MIR 55 207 -1 330 26 0 0 chr10 81479848 81479887 -64109401 + (TG)n Simple_repeat Simple_repeat 2 40 0 356 272 154 30 chr10 81480008 81480177 -64109111 + MIR SINE MIR 19 208 -54 308 260 40 10 chr10 81480241 81480341 -64108947 + MIR SINE MIR 160 262 0 198 0 0 0 chr10 81480970 81480992 -64108296 + (T)n Simple_repeat Simple_repeat 1 22 0 608 236 51 19 chr10 81483532 81483689 -64105599 + MIR SINE MIR 12 173 -89 688 217 25 6 chr10 81484793 81484950 -64104338 + MIR SINE MIR 35 194 -68 335 280 8 8 chr10 81485837 81485955 -64103333 - MER103 DNA DNA -46 120 3 424 302 82 6 chr10 81486513 81486695 -64102593 - MIR SINE MIR -65 197 2 2527 128 65 13 chr10 81487353 81487800 -64101488 - L1MB3 LINE L1 -39 6144 5675 418 195 0 24 chr10 81487818 81487836 -64101452 - L1ME LINE L1 -389 5777 5760 2327 196 79 20 chr10 81487836 81488820 -64100468 - L1MB3 LINE L1 -327 5856 4807 341 320 0 0 chr10 81491365 81491462 -64097826 + MIR3 SINE MIR 91 187 -21 2512 281 128 31 chr10 81492375 81493646 -64095642 + HAL1 LINE L1 348 1742 -765 671 285 242 10 chr10 81493708 81494228 -64095060 + HAL1 LINE L1 1848 2488 -19 35 63 0 0 chr10 81494241 81494304 -64094984 + AT_rich Low_complexity Low_complexity 1 63 0 268 355 101 4 chr10 81495246 81495522 -64093766 - L2 LINE L2 -25 3247 2945 1396 196 107 0 chr10 81495948 81496229 -64093059 + AluJo SINE Alu 2 312 0 615 258 13 26 chr10 81496880 81497031 -64092257 + MER5A DNA MER1_type 41 189 0 225 318 16 0 chr10 81497085 81497148 -64092140 - L2 LINE L2 -93 3179 3116 339 210 261 34 chr10 81498071 81498247 -64091041 - MLT1K LTR MaLR -10 578 363 411 250 161 18 chr10 81498501 81498809 -64090479 + MLT1J LTR MaLR 125 511 0 470 274 130 86 chr10 81498815 81499638 -64089650 + L2 LINE L2 2424 3293 -20 1642 134 91 18 chr10 81499638 81499913 -64089375 + AluJb SINE Alu 5 299 -13 470 274 130 86 chr10 81499913 81499933 -64089355 + L2 LINE L2 3293 3311 -2 21 0 0 0 chr10 81500723 81500744 -64088544 + AT_rich Low_complexity Low_complexity 1 21 0 486 119 12 12 chr10 81501101 81501185 -64088103 + L1PA15 LINE L1 6082 6165 0 379 308 186 0 chr10 81501669 81501890 -64087398 + MLT1J2 LTR MaLR 46 307 -143 968 152 0 0 chr10 81501969 81502101 -64087187 + FLAM_C SINE Alu 1 132 -1 2130 130 79 23 chr10 81503022 81503376 -64085912 + THE1C LTR MaLR 2 375 0 182 158 26 26 chr10 81503448 81503486 -64085802 - MIR3 SINE MIR -18 190 153 * 323 331 96 0 chr10 81503480 81503616 -64085672 + MIR SINE MIR 66 214 -48 673 328 17 4 chr10 81504321 81504559 -64084729 - MIR SINE MIR -1 261 21 315 0 0 0 chr10 81505927 81505962 -64083326 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 865 247 168 25 chr10 81507301 81507665 -64081623 - L2 LINE L2 -8 3305 2890 181 383 33 0 chr10 81508111 81508171 -64081117 + L2 LINE L2 3247 3308 -5 21 0 0 0 chr10 81508732 81508753 -64080535 + AT_rich Low_complexity Low_complexity 1 21 0 8170 157 11 29 chr10 81511912 81513353 -64075935 - L1P LINE L1 -4716 1430 15 544 247 75 20 chr10 81513644 81513790 -64075498 - MIR SINE MIR -37 225 72 358 282 36 9 chr10 81514051 81514161 -64075127 - MIR3 SINE MIR -48 160 48 421 307 38 24 chr10 81514473 81514678 -64074610 + MIR3 SINE MIR 9 212 -50 605 234 40 0 chr10 81515109 81515233 -64074055 + MER94 DNA DNA 6 134 0 272 324 107 36 chr10 81515413 81515637 -64073651 + MIR SINE MIR 19 262 0 470 248 64 13 chr10 81515807 81515964 -64073324 + MIR SINE MIR 21 185 -77 372 269 0 19 chr10 81516483 81516587 -64072701 - MLT1K LTR MaLR 0 588 487 189 0 0 0 chr10 81517658 81517679 -64071609 + (CAAAA)n Simple_repeat Simple_repeat 5 25 0 257 200 160 40 chr10 81517937 81518012 -64071276 + MIR SINE MIR 35 118 -90 238 250 0 0 chr10 81518016 81518064 -64071224 - MIR SINE MIR -69 139 92 23 0 0 0 chr10 81518275 81518298 -64070990 + AT_rich Low_complexity Low_complexity 1 23 0 583 129 24 12 chr10 81518387 81518472 -64070816 - AluJ SINE Alu -24 288 203 748 168 34 0 chr10 81518484 81518603 -64070685 - AluJ SINE Alu -177 135 13 502 226 10 10 chr10 81518677 81518779 -64070509 + FLAM_A SINE Alu 36 137 -5 751 257 71 5 chr10 81519713 81519923 -64069365 - MLT1G LTR MaLR 0 590 367 24 32 0 0 chr10 81519960 81519991 -64069297 + AT_rich Low_complexity Low_complexity 1 31 0 200 288 12 38 chr10 81520166 81520246 -64069042 + MIR SINE MIR 71 148 -114 602 260 102 17 chr10 81520279 81520514 -64068774 - MLT1G LTR MaLR -340 255 1 596 240 25 61 chr10 81521809 81521861 -64067427 - MIR SINE MIR -22 240 188 2114 130 13 0 chr10 81521861 81522162 -64067126 - AluSx SINE Alu -6 306 2 596 240 25 61 chr10 81522162 81522305 -64066983 - MIR SINE MIR -74 188 52 29 0 0 0 chr10 81524702 81524731 -64064557 + AT_rich Low_complexity Low_complexity 1 29 0 218 114 0 23 chr10 81524732 81524776 -64064512 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 723 301 16 16 chr10 81525517 81525703 -64063585 + MER91A DNA MER1_type 1 186 -10 1505 163 3 49 chr10 81525714 81526038 -64063250 + L1MB3 LINE L1 5867 6153 -30 204 221 189 55 chr10 81526693 81526820 -64062468 + MIR3 SINE MIR 39 182 -26 199 146 36 0 chr10 81526873 81526928 -64062360 + (TG)n Simple_repeat Simple_repeat 1 57 0 214 213 46 28 chr10 81526953 81527061 -64062227 + (GTGTG)n Simple_repeat Simple_repeat 1 110 0 * 253 138 58 23 chr10 81526983 81527070 -64062218 + (TG)n Simple_repeat Simple_repeat 2 91 0 672 181 16 8 chr10 81527149 81527276 -64062012 + L1MB4 LINE L1 6047 6174 -6 3102 121 27 59 chr10 81528752 81529341 -64059947 - L1MA9 LINE L1 -24 6288 5719 759 92 0 0 chr10 81529340 81529438 -64059850 + L1MA9 LINE L1 5637 5734 -578 * 454 249 26 60 chr10 81529492 81529655 -64059633 + MER5B DNA MER1_type 40 177 -1 2106 144 0 0 chr10 81531226 81531525 -64057763 + AluJb SINE Alu 1 299 -13 219 259 143 0 chr10 81531633 81531727 -64057561 + MIR SINE MIR 42 153 -66 1902 203 44 29 chr10 81532348 81532802 -64056486 - MER65C LTR ERV1 0 461 1 252 299 94 34 chr10 81533308 81533425 -64055863 - MIR3 SINE MIR -81 127 4 2785 82 8 10 chr10 81533895 81538493 -64050795 + L1PA7 LINE L1 1439 6150 -4 7078 188 40 3 chr10 81538494 81539785 -64049503 - MSTA-int LTR MaLR -313 1338 1 2302 177 57 5 chr10 81539785 81540192 -64049096 - MSTA LTR MaLR 0 428 1 458 323 77 67 chr10 81540709 81541084 -64048204 + L2 LINE L2 2894 3272 0 2331 249 37 37 chr10 81541528 81542200 -64047088 - L1ME3A LINE L1 -8 6162 5491 5396 150 23 19 chr10 81542219 81542896 -64046392 - L1MB1 LINE L1 -1 6167 5478 1772 156 61 10 chr10 81542896 81543191 -64046097 - AluJb SINE Alu -2 310 1 5396 150 23 19 chr10 81543191 81543730 -64045558 - L1MB1 LINE L1 -690 5478 4943 226 25 25 50 chr10 81543877 81543917 -64045371 + (TTTTTG)n Simple_repeat Simple_repeat 4 42 0 282 305 94 59 chr10 81544124 81544327 -64044961 + L3 LINE CR1 595 804 -773 2267 262 75 16 chr10 81545191 81546013 -64043275 - L1MC4a LINE L1 -1643 6165 5295 1621 162 14 37 chr10 81546024 81546320 -64042968 + AluJb SINE Alu 1 289 -23 297 111 0 0 chr10 81546574 81546619 -64042669 - Alu SINE Alu -3 299 255 3444 64 32 2 chr10 81546976 81547332 -64041956 - L1PB1 LINE L1 -1 6150 5777 348 43 0 0 chr10 81547332 81547378 -64041910 + (CA)n Simple_repeat Simple_repeat 2 47 0 3444 64 32 2 chr10 81547378 81547456 -64041832 - L1PB1 LINE L1 -374 5777 5703 257 229 21 73 chr10 81547517 81547613 -64041675 + L2 LINE L2 3223 3313 0 21 0 0 0 chr10 81549283 81549304 -64039984 + AT_rich Low_complexity Low_complexity 1 21 0 922 234 72 9 chr10 81551321 81551543 -64037745 - MIR SINE MIR -1 261 26 1852 137 13 33 chr10 81551994 81552294 -64036994 - AluJo SINE Alu -18 294 1 316 287 65 0 chr10 81554059 81554167 -64035121 + L2 LINE L2 3137 3251 -21 457 200 50 36 chr10 81554189 81554329 -64034959 - L1ME4a LINE L1 -32 6089 5948 243 0 0 0 chr10 81558919 81558946 -64030342 + (T)n Simple_repeat Simple_repeat 1 27 0 215 268 18 0 chr10 81560519 81560575 -64028713 + CT-rich Low_complexity Low_complexity 1 57 0 536 167 0 10 chr10 81560575 81560671 -64028617 - L1MA9 LINE L1 -5 6307 6213 2117 125 31 0 chr10 81560671 81560991 -64028297 + L1MA9 LINE L1 5823 6152 -160 212 257 29 43 chr10 81560991 81561061 -64028227 + CT-rich Low_complexity Low_complexity 2 70 0 186 103 0 0 chr10 81561251 81561280 -64028008 + (TC)n Simple_repeat Simple_repeat 2 30 0 22 0 0 0 chr10 81561830 81561852 -64027436 + AT_rich Low_complexity Low_complexity 1 22 0 197 296 114 34 chr10 81562463 81562551 -64026737 + L3 LINE CR1 1438 1532 -45 585 165 8 0 chr10 81562612 81562715 -64026573 - MER5A DNA MER1_type -82 107 4 186 43 0 0 chr10 81563061 81563084 -64026204 + (TAA)n Simple_repeat Simple_repeat 2 24 0 442 196 0 22 chr10 81564574 81564666 -64024622 - MER5B DNA MER1_type -84 94 5 294 279 77 10 chr10 81565083 81565187 -64024101 + MER103 DNA DNA 35 145 -21 297 304 58 106 chr10 81565552 81565930 -64023358 - L2 LINE L2 -4 3268 2909 363 297 27 9 chr10 81566149 81566260 -64023028 - MIR SINE MIR -111 151 39 254 268 228 0 chr10 81566406 81566533 -64022755 - MIR3 SINE MIR -6 202 47 362 0 0 0 chr10 81566688 81566729 -64022559 + L1PA6 LINE L1 6109 6149 -5 651 260 91 40 chr10 81566757 81566875 -64022413 + MER46C DNA MER2_type 28 139 -199 1521 174 63 63 chr10 81566875 81567301 -64021987 + LTR37A LTR ERV1 1 426 0 651 260 91 40 chr10 81567301 81567478 -64021810 + MER46C DNA MER2_type 139 338 0 375 196 27 62 chr10 81567596 81567708 -64021580 + MER46C DNA MER2_type 231 338 0 216 0 0 0 chr10 81568489 81568513 -64020775 + (TTAAA)n Simple_repeat Simple_repeat 1 24 0 1560 168 32 14 chr10 81568513 81568793 -64020495 - AluJb SINE Alu -25 287 3 279 205 72 60 chr10 81568926 81569009 -64020279 - MIR3 SINE MIR 0 208 125 355 277 21 0 chr10 81569232 81569326 -64019962 - MER69 DNA AcHobo -2430 96 1 301 269 92 0 chr10 81569504 81569623 -64019665 + MER117 DNA MER1_type 36 165 -32 308 239 56 106 chr10 81569711 81569853 -64019435 + L2 LINE L2 3179 3313 0 2998 51 0 8 chr10 81572640 81572995 -64016293 + L1PA7 LINE L1 5802 6153 -1 239 264 0 0 chr10 81573662 81573734 -64015554 + G-rich Low_complexity Low_complexity 1 72 0 1559 160 52 10 chr10 81573751 81574039 -64015249 - AluSx SINE Alu -12 300 1 272 307 0 40 chr10 81574512 81574587 -64014701 - MIR3 SINE MIR -11 197 126 207 273 0 18 chr10 81575088 81575143 -64014145 + L2 LINE L2 3214 3267 -5 2262 137 22 22 chr10 81576061 81576419 -64012869 + L1PB4 LINE L1 5789 6146 -10 573 123 110 32 chr10 81576437 81576591 -64012697 + Charlie5 DNA MER1_type 2459 2624 0 845 223 98 27 chr10 81576608 81576792 -64012496 + MER58A DNA MER1_type 28 224 0 421 320 15 50 chr10 81578445 81578645 -64010643 - MIR3 SINE MIR -12 196 4 384 263 52 80 chr10 81580652 81580865 -64008423 + MIR SINE MIR 46 252 -10 755 277 22 22 chr10 81581194 81581425 -64007863 + MIR SINE MIR 2 232 -30 2447 65 3 13 chr10 81581481 81581790 -64007498 + AluY SINE Alu 1 306 -5 207 229 57 71 chr10 81583057 81583127 -64006161 - L2 LINE L2 -12 3301 3233 288 324 54 9 chr10 81585071 81585182 -64004106 + MIR3 SINE MIR 50 165 -43 354 302 16 0 chr10 81587544 81587670 -64001618 + (CATATA)n Simple_repeat Simple_repeat 6 133 0 433 363 39 4 chr10 81588425 81588681 -64000607 - L3 LINE CR1 -1 1576 1312 688 261 47 24 chr10 81588727 81588938 -64000350 - MIR SINE MIR 0 262 47 195 304 89 25 chr10 81588959 81589117 -64000171 + MIR SINE MIR 80 247 -15 238 329 46 75 chr10 81589435 81589742 -63999546 - MLT1K LTR MaLR -103 485 188 912 118 0 16 chr10 81590210 81590337 -63998951 + FLAM_C SINE Alu 1 125 -8 222 239 0 0 chr10 81591743 81591789 -63997499 + L2 LINE L2 3227 3272 0 410 211 10 0 chr10 81592375 81592479 -63996809 + GA-rich Low_complexity Low_complexity 4 108 0 223 177 32 0 chr10 81593379 81593441 -63995847 + GA-rich Low_complexity Low_complexity 1 64 0 194 91 30 0 chr10 81595272 81595305 -63993983 + (TA)n Simple_repeat Simple_repeat 1 34 0 198 0 0 0 chr10 81595306 81595328 -63993960 + (TG)n Simple_repeat Simple_repeat 2 23 0 309 335 96 16 chr10 81595844 81596032 -63993256 - MIR SINE MIR -38 224 22 516 299 45 7 chr10 81596247 81596401 -63992887 + MARNA DNA Mariner 415 574 -12 666 180 0 0 chr10 81597787 81597926 -63991362 + (CA)n Simple_repeat Simple_repeat 2 140 0 22 0 0 0 chr10 81598057 81598079 -63991209 + AT_rich Low_complexity Low_complexity 1 22 0 339 252 103 68 chr10 81600403 81600580 -63988708 + MIR SINE MIR 18 202 -60 335 278 32 102 chr10 81600897 81601181 -63988107 + L1ME4a LINE L1 5622 5885 -236 389 230 103 32 chr10 81602380 81602506 -63986782 - MIR3 SINE MIR -37 171 37 232 286 0 18 chr10 81604924 81604980 -63984308 - L2 LINE L2 0 3272 3218 378 250 48 48 chr10 81605121 81605245 -63984043 - L2 LINE L2 -220 3052 2929 321 89 0 0 chr10 81606326 81606371 -63982917 + (TCCA)n Simple_repeat Simple_repeat 1 45 0 237 137 221 11 chr10 81606471 81606566 -63982722 - Charlie7 DNA MER1_type -54 2558 2444 1013 71 0 0 chr10 81606568 81606694 -63982594 + AluY SINE Alu 175 300 -11 1878 240 78 45 chr10 81606695 81606954 -63982334 - Charlie7 DNA MER1_type -167 2445 2196 2038 173 88 51 chr10 81606954 81607441 -63981847 - MLT1D LTR MaLR 0 505 1 1878 240 78 45 chr10 81607441 81607911 -63981377 - Charlie7 DNA MER1_type -416 2196 1627 2231 127 0 0 chr10 81607911 81608210 -63981078 - AluSx SINE Alu -13 299 1 1878 240 78 45 chr10 81608210 81608416 -63980872 - Charlie7 DNA MER1_type -985 1627 1429 237 326 96 22 chr10 81608491 81608761 -63980527 - Charlie7 DNA MER1_type -2317 295 6 399 308 46 0 chr10 81608766 81608923 -63980365 - MIR3 SINE MIR -55 153 5 777 299 28 33 chr10 81608992 81609206 -63980082 + MIR SINE MIR 31 243 -19 267 31 0 0 chr10 81609262 81609294 -63979994 + (CA)n Simple_repeat Simple_repeat 2 33 0 390 318 28 34 chr10 81610336 81610515 -63978773 + MIR3 SINE MIR 7 184 -24 884 266 30 13 chr10 81610740 81610977 -63978311 + MLT1I LTR MaLR 167 407 -2 21 36 0 0 chr10 81611882 81611910 -63977378 + AT_rich Low_complexity Low_complexity 1 28 0 426 39 0 0 chr10 81614512 81614564 -63974724 + (CA)n Simple_repeat Simple_repeat 2 53 0 246 179 54 0 chr10 81614581 81614637 -63974651 - L1MCa LINE L1 -4362 2064 2006 * 287 200 44 67 chr10 81614602 81614692 -63974596 + L1MC4 LINE L1 6616 6703 -1339 235 211 58 39 chr10 81614663 81614767 -63974521 + L1MCa LINE L1 1996 2101 -4325 * 227 229 0 0 chr10 81614786 81614847 -63974441 + L1MC4 LINE L1 6920 6980 -1342 374 67 17 0 chr10 81614853 81614908 -63974380 + (TA)n Simple_repeat Simple_repeat 2 58 0 1479 197 13 30 chr10 81614908 81615207 -63974081 - AluJo SINE Alu -18 294 1 357 227 23 0 chr10 81615857 81615945 -63973343 - L1MC4 LINE L1 -1339 6703 6614 313 278 0 0 chr10 81615867 81615957 -63973331 + L1MC4 LINE L1 6614 6703 -1339 * 315 0 0 0 chr10 81616000 81616009 -63973279 + (TG)n Simple_repeat Simple_repeat 1 44 0 315 0 0 0 chr10 81616009 81616044 -63973244 + (TG)n Simple_repeat Simple_repeat 2 36 0 1421 164 40 79 chr10 81616059 81616363 -63972925 - AluJo SINE Alu -20 292 1 1654 163 7 37 chr10 81616425 81616725 -63972563 + AluJo SINE Alu 2 292 -20 357 223 213 11 chr10 81616727 81616821 -63972467 + MIR SINE MIR 34 146 -62 265 252 75 68 chr10 81616931 81617078 -63972210 - MER112 DNA MER1_type -96 164 17 16439 119 19 18 chr10 81617910 81620326 -63968962 - Tigger1 DNA MER2_type 0 2418 1 662 314 82 26 chr10 81620451 81620754 -63968534 - L2 LINE L2 0 3272 2953 905 262 23 9 chr10 81620955 81621176 -63968112 + MIR SINE MIR 39 262 0 183 178 22 44 chr10 81622069 81622114 -63967174 - MER5A DNA MER1_type -39 150 107 23 0 0 0 chr10 81622521 81622544 -63966744 + AT_rich Low_complexity Low_complexity 1 23 0 219 276 95 29 chr10 81623155 81623260 -63966028 + L2 LINE L2 3160 3271 -1 201 303 46 46 chr10 81624328 81624437 -63964851 + MIR SINE MIR 22 130 -132 278 203 76 0 chr10 81624482 81624561 -63964727 + (CATATA)n Simple_repeat Simple_repeat 5 89 0 186 103 0 0 chr10 81624841 81624870 -63964418 + (AGGGGG)n Simple_repeat Simple_repeat 5 33 0 496 214 145 0 chr10 81624992 81625123 -63964165 + MIR SINE MIR 113 262 0 755 249 92 53 chr10 81625389 81625688 -63963600 - MER113 DNA MER1_type? -83 438 117 2338 90 7 0 chr10 81625688 81625989 -63963299 - AluY SINE Alu -8 303 1 755 249 92 53 chr10 81625989 81626103 -63963185 - MER113 DNA MER1_type? -404 117 9 186 304 109 33 chr10 81626121 81626213 -63963075 - MIR SINE MIR -82 126 28 843 281 126 46 chr10 81626663 81627468 -63961820 - L2 LINE L2 0 3313 2451 182 229 42 0 chr10 81627640 81627688 -63961600 - L3b LINE CR1 -203 1380 1331 219 146 0 0 chr10 81628514 81628555 -63960733 + (T)n Simple_repeat Simple_repeat 1 41 0 297 222 0 0 chr10 81628806 81628860 -63960428 + L2 LINE L2 3219 3272 0 588 294 106 49 chr10 81628916 81629474 -63959814 - L2 LINE L2 -71 3242 2643 1277 266 96 31 chr10 81629591 81630069 -63959219 + MLT1J LTR MaLR 1 509 -2 431 290 124 32 chr10 81630123 81630340 -63958948 - MIR SINE MIR -15 247 11 278 111 148 0 chr10 81630621 81630675 -63958613 - MLT1J2 LTR MaLR -37 409 348 707 278 73 12 chr10 81630710 81630969 -63958319 - MLT1J2 LTR MaLR -175 275 1 592 299 77 26 chr10 81630973 81631207 -63958081 + MIR SINE MIR 14 259 -3 2266 132 0 0 chr10 81631269 81631579 -63957709 - AluSx SINE Alu -2 310 1 3929 135 7 3 chr10 81634609 81635200 -63954088 + L1MB4 LINE L1 5588 6180 0 2014 129 9 38 chr10 81635274 81635592 -63953696 - AluJb SINE Alu -3 309 1 1468 134 65 0 chr10 81635734 81635950 -63953338 - MER30 DNA MER1_type 0 230 1 1116 221 22 4 chr10 81636037 81636268 -63953020 + MIR SINE MIR 28 262 0 292 377 19 13 chr10 81637276 81637430 -63951858 + MIR3 SINE MIR 37 191 -17 360 0 0 0 chr10 81638408 81638448 -63950840 + (TG)n Simple_repeat Simple_repeat 2 41 0 319 258 39 47 chr10 81639757 81639885 -63949403 + L2 LINE L2 3186 3312 -1 191 62 62 0 chr10 81640035 81640067 -63949221 + CT-rich Low_complexity Low_complexity 2 35 0 6423 66 4 0 chr10 81640113 81640921 -63948367 - L1PA8 LINE L1 -7 6165 5355 1385 212 127 43 chr10 81641192 81641655 -63947633 + MLT1D LTR MaLR 3 504 -1 262 296 83 59 chr10 81641813 81641982 -63947306 - MIR SINE MIR -55 207 35 26 0 0 0 chr10 81643068 81643094 -63946194 + AT_rich Low_complexity Low_complexity 1 26 0 1429 139 0 0 chr10 81643269 81643471 -63945817 + AluSg/x SINE Alu 90 291 -21 1644 166 3 40 chr10 81643479 81643781 -63945507 + AluJo SINE Alu 1 291 -21 712 162 29 22 chr10 81643798 81643934 -63945354 + L1MB3 LINE L1 6045 6181 -2 182 241 110 62 chr10 81644360 81644505 -63944783 + L3 LINE CR1 1301 1452 -125 192 125 0 0 chr10 81644724 81644756 -63944532 + (TCCC)n Simple_repeat Simple_repeat 2 33 0 451 265 93 52 chr10 81644832 81645146 -63944142 - L2 LINE L2 -193 3079 2753 1094 186 55 5 chr10 81646551 81646750 -63942538 - MER20 DNA MER1_type -10 209 1 243 320 95 54 chr10 81647238 81647532 -63941756 + L2 LINE L2 3008 3313 0 22 35 0 0 chr10 81647909 81647938 -63941350 + AT_rich Low_complexity Low_complexity 1 29 0 1121 171 12 0 chr10 81648735 81648899 -63940389 - FAM SINE Alu -9 166 1 220 262 0 0 chr10 81649924 81649966 -63939322 - MIR3 SINE MIR -52 156 115 226 228 18 0 chr10 81651122 81651179 -63938109 + tRNA-Glu-GAA tRNA tRNA 8 65 -10 398 291 165 0 chr10 81651181 81651339 -63937949 + MIR SINE MIR 68 251 -11 2092 146 0 0 chr10 81651555 81651857 -63937431 - AluSx SINE Alu -10 302 1 357 328 11 40 chr10 81652477 81652654 -63936634 - MIR SINE MIR -71 191 20 522 244 29 73 chr10 81653064 81653269 -63936019 - MLT1J2 LTR MaLR -6 444 249 1209 239 60 39 chr10 81653287 81653723 -63935565 + MLT1C LTR MaLR 6 609 -17 433 177 191 34 chr10 81653720 81653867 -63935421 - MLT1J1 LTR MaLR -256 190 21 * 393 315 55 14 chr10 81655220 81655413 -63933875 - MIR SINE MIR -52 156 11 2409 87 0 0 chr10 81657341 81657641 -63931647 + AluY SINE Alu 5 304 -7 1135 137 0 0 chr10 81657641 81657802 -63931486 + AluSc SINE Alu 132 292 -17 460 270 107 64 chr10 81657803 81658036 -63931252 - MLT1J LTR MaLR -43 468 226 326 280 76 38 chr10 81658111 81658243 -63931045 - MER63 DNA MER1_type 0 1061 700 304 281 65 22 chr10 81658277 81658416 -63930872 - MLT1J LTR MaLR -366 145 1 253 319 36 22 chr10 81658459 81658597 -63930691 - L1MC/D LINE L1 -2065 5743 5604 727 271 24 35 chr10 81658653 81658908 -63930380 + MIR SINE MIR 3 254 -8 23 0 0 0 chr10 81659168 81659191 -63930097 + AT_rich Low_complexity Low_complexity 1 23 0 1289 174 18 14 chr10 81659699 81659917 -63929371 - MER20 DNA MER1_type 0 219 1 2351 64 24 0 chr10 81661446 81661741 -63927547 - AluY SINE Alu -9 302 1 204 325 16 95 chr10 81661777 81661847 -63927441 - L2 LINE L2 -24 3248 3190 2174 100 0 0 chr10 81661847 81662152 -63927136 - AluSg SINE Alu 0 305 1 204 325 16 95 chr10 81662152 81662206 -63927082 - L2 LINE L2 -82 3190 3133 806 281 24 24 chr10 81662223 81662472 -63926816 + MIR SINE MIR 6 254 -8 1103 260 22 52 chr10 81663087 81663447 -63925841 + MLT1I LTR MaLR 1 349 -60 1129 202 0 28 chr10 81663447 81663660 -63925628 - MER58A DNA MER1_type 0 224 18 326 231 0 0 chr10 81663668 81663733 -63925555 + MLT1I LTR MaLR 344 408 -1 351 165 25 13 chr10 81663750 81663829 -63925459 - L1ME2 LINE L1 0 6098 6019 5651 227 73 38 chr10 81663893 81664703 -63924585 - L1ME2 LINE L1 -363 5735 4955 2306 114 3 0 chr10 81664703 81665010 -63924278 + AluSg SINE Alu 1 308 -2 5651 227 73 38 chr10 81665010 81666173 -63923115 - L1ME2 LINE L1 -1143 4955 3652 2045 114 29 0 chr10 81666173 81666454 -63922834 - AluSq SINE Alu -24 289 1 5651 227 73 38 chr10 81666454 81666973 -63922315 - L1ME2 LINE L1 -2446 3652 3153 1862 224 98 16 chr10 81666971 81667088 -63922200 - L1MB7 LINE L1 -9 6175 6059 * 1686 234 104 19 chr10 81667088 81668009 -63921279 - L1MC4 LINE L1 -743 5403 5046 * 2198 240 87 46 chr10 81668005 81668400 -63920888 - L1ME2 LINE L1 -2911 3169 2792 531 114 45 23 chr10 81668400 81668488 -63920800 + L1MA5A LINE L1 6205 6294 -3 2198 240 87 46 chr10 81668488 81669100 -63920188 - L1ME2 LINE L1 -3288 2792 2120 1708 130 45 0 chr10 81669100 81669270 -63920018 - AluSx SINE Alu -8 304 118 387 0 0 0 chr10 81669270 81669313 -63919975 + (TG)n Simple_repeat Simple_repeat 2 44 0 1708 130 45 0 chr10 81669313 81669388 -63919900 - AluSx SINE Alu -194 118 48 365 241 36 94 chr10 81669389 81669711 -63919577 - L1ME2 LINE L1 -4890 1149 828 * 816 246 61 33 chr10 81669692 81670022 -63919266 - L1M4 LINE L1 -3622 2524 2186 835 112 0 0 chr10 81670022 81670138 -63919150 - AluSg/x SINE Alu -7 305 190 617 268 98 16 chr10 81670139 81670456 -63918832 - L1ME2 LINE L1 -5169 901 559 726 296 66 25 chr10 81670754 81671146 -63918142 - L1ME2 LINE L1 -5606 464 57 381 285 312 13 chr10 81671163 81671482 -63917806 - L2 LINE L2 -323 2990 2577 1484 221 7 4 chr10 81671626 81671907 -63917381 + AluJb SINE Alu 1 282 -30 381 43 0 0 chr10 81671910 81671957 -63917331 + (CA)n Simple_repeat Simple_repeat 2 48 0 191 315 0 0 chr10 81672266 81672320 -63916968 + L2 LINE L2 3210 3263 -9 207 0 0 0 chr10 81672522 81672545 -63916743 + (TG)n Simple_repeat Simple_repeat 2 24 0 30 0 0 0 chr10 81672545 81672575 -63916713 + AT_rich Low_complexity Low_complexity 1 30 0 200 237 17 34 chr10 81672632 81672691 -63916597 - MIR SINE MIR -8 254 197 394 303 28 21 chr10 81672709 81672854 -63916434 + MIR SINE MIR 2 147 -115 1129 230 24 4 chr10 81673053 81673305 -63915983 + MIR SINE MIR 4 260 -2 2316 164 65 7 chr10 81675476 81675879 -63913409 - MSTB LTR MaLR 0 426 1 2147 132 0 0 chr10 81678103 81678398 -63910890 - AluSc SINE Alu -14 295 1 611 299 128 63 chr10 81678872 81678952 -63910336 - L2 LINE L2 -2 3270 3197 2320 100 3 3 chr10 81678952 81679253 -63910035 + AluSx SINE Alu 1 301 -11 611 299 128 63 chr10 81679253 81679428 -63909860 - L2 LINE L2 -75 3197 3035 924 236 0 22 chr10 81679428 81679610 -63909678 - MER45A DNA AcHobo 0 178 1 611 299 128 63 chr10 81679610 81680119 -63909169 - L2 LINE L2 -237 3035 2431 297 238 0 0 chr10 81680120 81680183 -63909105 + MER116 DNA Mariner 5 67 -13 331 350 31 6 chr10 81680269 81680429 -63908859 - L2 LINE L2 -920 2394 2231 550 254 154 0 chr10 81680458 81680627 -63908661 - MIR SINE MIR -66 196 2 226 265 0 0 chr10 81681078 81681127 -63908161 - MER117 DNA MER1_type -86 111 63 199 231 0 0 chr10 81681129 81681168 -63908120 - MIR SINE MIR -63 145 107 258 208 216 48 chr10 81681228 81681353 -63907935 - MIR3 SINE MIR -43 165 20 270 0 0 0 chr10 81681700 81681730 -63907558 + (T)n Simple_repeat Simple_repeat 1 30 0 285 254 26 7 chr10 81682987 81683078 -63906210 + MER5B DNA MER1_type 89 189 0 1135 232 63 75 chr10 81684971 81685385 -63903903 + MLT1I LTR MaLR 1 409 0 729 274 73 0 chr10 81685386 81685590 -63903698 - MIR SINE MIR -5 257 39 241 262 16 0 chr10 81686234 81686295 -63902993 - MLT1K LTR MaLR -16 572 511 239 259 47 47 chr10 81686680 81686765 -63902523 - L2 LINE L2 -3 3269 3185 367 345 148 18 chr10 81686822 81687051 -63902237 + L3 LINE CR1 1308 1566 -11 710 343 77 3 chr10 81687382 81687773 -63901515 - MLT1L LTR MaLR 0 615 196 202 292 53 53 chr10 81687938 81688051 -63901237 - MIR SINE MIR -31 231 119 220 233 110 89 chr10 81688109 81688255 -63901033 - L3 LINE CR1 -2 1575 1427 806 124 93 34 chr10 81689375 81689546 -63899742 + MER33 DNA MER1_type 1 166 -101 11680 180 29 65 chr10 81689546 81691078 -63898210 + L1P5 LINE L1 2425 4010 -2146 2354 78 0 0 chr10 81691078 81691393 -63897895 + AluY SINE Alu 1 315 0 11680 180 29 65 chr10 81691393 81692322 -63896966 + L1P5 LINE L1 4010 4884 -1272 827 191 38 6 chr10 81692322 81692479 -63896809 - FRAM SINE Alu -18 158 1 11680 180 29 65 chr10 81692479 81693226 -63896062 + L1P5 LINE L1 4884 5656 -500 325 130 54 3 chr10 81693222 81693276 -63896012 + L1M2 LINE L1 5724 5782 -388 * 396 0 0 0 chr10 81693276 81693320 -63895968 + (TG)n Simple_repeat Simple_repeat 2 45 0 325 130 54 3 chr10 81693320 81693333 -63895955 + L1M2 LINE L1 5782 5793 -377 610 274 115 13 chr10 81693851 81694241 -63895047 - L1ME4a LINE L1 -2 6119 5690 226 180 33 0 chr10 81694300 81694361 -63894927 + CT-rich Low_complexity Low_complexity 2 64 0 265 270 0 16 chr10 81694714 81694777 -63894511 - MIR3 SINE MIR -48 160 99 635 236 54 0 chr10 81694831 81694979 -63894309 + MLT1L LTR MaLR 452 607 -8 274 230 54 14 chr10 81696689 81696763 -63892525 - MLT1G LTR MaLR -16 574 498 335 259 81 61 chr10 81696894 81697091 -63892197 - MLT1L LTR MaLR -320 229 29 397 324 116 23 chr10 81697745 81698004 -63891284 + L3b LINE CR1 1102 1384 -199 359 360 99 0 chr10 81698806 81698978 -63890310 + MIR3 SINE MIR 3 191 -17 234 317 73 8 chr10 81699195 81699318 -63889970 - MER117 DNA MER1_type -66 131 1 553 294 88 4 chr10 81706524 81706752 -63882536 - MIR SINE MIR -14 248 2 411 21 0 0 chr10 81706962 81707010 -63882278 + (TG)n Simple_repeat Simple_repeat 1 48 0 204 329 154 41 chr10 81707413 81707705 -63881583 + L2 LINE L2 2852 3176 -96 207 69 0 0 chr10 81708317 81708346 -63880942 + (TTG)n Simple_repeat Simple_repeat 2 30 0 1195 133 67 127 chr10 81708350 81708650 -63880638 - AluJo SINE Alu -30 282 1 314 302 32 79 chr10 81709011 81709263 -63880025 - L3 LINE CR1 -1075 502 263 29 47 0 0 chr10 81709347 81709390 -63879898 + AT_rich Low_complexity Low_complexity 1 43 0 460 233 58 0 chr10 81709971 81710074 -63879214 + L2 LINE L2 3199 3307 -6 1277 258 68 40 chr10 81710882 81711282 -63878006 - MER115 DNA AcHobo -3 690 280 263 320 0 0 chr10 81713139 81713214 -63876074 - L2 LINE L2 -1 3312 3238 507 290 51 76 chr10 81713382 81713696 -63875592 + L2 LINE L2 3008 3313 0 483 176 0 0 chr10 81715575 81715666 -63873622 + (CA)n Simple_repeat Simple_repeat 2 92 0 1248 214 131 90 chr10 81719567 81720155 -63869133 - MLT1E2 LTR MaLR -14 612 1 1393 218 63 14 chr10 81720323 81720671 -63868617 + MLT1A1 LTR MaLR 1 365 0 421 270 22 56 chr10 81721254 81721432 -63867856 + MER5B DNA MER1_type 6 177 -1 281 311 44 24 chr10 81721489 81721695 -63867593 - L2 LINE L2 -237 3035 2826 415 339 11 23 chr10 81723080 81723254 -63866034 - MIR3 SINE MIR -21 187 16 304 231 26 0 chr10 81723662 81723740 -63865548 - MER116 DNA Mariner 0 80 1 231 36 0 0 chr10 81723789 81723817 -63865471 + (TC)n Simple_repeat Simple_repeat 1 28 0 499 180 10 0 chr10 81723915 81724015 -63865273 - L1MA9 LINE L1 -213 6099 5999 2465 181 49 47 chr10 81724029 81724625 -63864663 - L1MD3 LINE L1 -2 7993 7397 225 330 117 0 chr10 81726216 81726319 -63862969 - MIR3 SINE MIR -3 205 91 26 30 0 0 chr10 81726395 81726428 -63862860 + AT_rich Low_complexity Low_complexity 1 33 0 2223 119 0 0 chr10 81726636 81726930 -63862358 - AluSq SINE Alu -19 294 1 522 216 86 0 chr10 81727196 81727312 -63861976 - MER112 DNA MER1_type -1 259 134 249 243 14 29 chr10 81727427 81727497 -63861791 + (CATA)n Simple_repeat Simple_repeat 2 70 0 394 231 8 8 chr10 81727502 81727511 -63861777 + (TA)n Simple_repeat Simple_repeat 2 10 -125 2496 139 32 28 chr10 81727511 81727943 -63861345 + Tigger2a DNA MER2_type 1 434 0 394 231 8 8 chr10 81727943 81728067 -63861221 + (TA)n Simple_repeat Simple_repeat 9 135 0 9884 58 9 92 chr10 81728162 81729673 -63859615 - SVA Other Other -1 1385 1 1249 169 72 16 chr10 81829688 81829973 -63759315 + L1MB2 LINE L1 5719 5976 -195 700 243 114 56 chr10 81830400 81830856 -63758432 + LTR33A LTR ERVL 7 523 0 3382 90 7 0 chr10 81830891 81831326 -63757962 + L1PA10 LINE L1 5730 6167 -1 262 287 245 28 chr10 81832244 81832460 -63756828 - L2 LINE L2 -91 3181 2919 216 282 14 0 chr10 81832905 81832976 -63756312 + T-rich Low_complexity Low_complexity 4 75 0 2526 126 53 0 chr10 81834426 81834782 -63754506 - THE1C LTR MaLR 0 375 1 297 0 0 0 chr10 81835025 81835058 -63754230 + (TG)n Simple_repeat Simple_repeat 1 33 0 501 178 8 85 chr10 81835919 81836037 -63753251 - MER94 DNA DNA -4 130 22 234 0 0 0 chr10 81836140 81836166 -63753122 + (TTTA)n Simple_repeat Simple_repeat 4 29 0 8907 42 4 0 chr10 81836167 81837955 -63751333 - L1PA4 LINE L1 -6 6149 4355 5858 32 1 0 chr10 81837955 81838638 -63750650 + L1PA4 LINE L1 3671 4354 -1792 466 275 60 28 chr10 81838652 81838834 -63750454 + MIR SINE MIR 72 259 -3 191 188 0 0 chr10 81839222 81839254 -63750034 + MIR SINE MIR 117 148 -114 246 215 38 38 chr10 81840118 81840197 -63749091 - MIR SINE MIR -163 99 21 438 290 85 59 chr10 81840429 81841188 -63748100 - L1ME4a LINE L1 -88 6033 5223 444 37 0 0 chr10 81841188 81841242 -63748046 + (CA)n Simple_repeat Simple_repeat 1 54 0 438 290 85 59 chr10 81841242 81841692 -63747596 - L1ME4a LINE L1 -898 5223 4786 2196 123 0 3 chr10 81841902 81842211 -63747077 - AluSx SINE Alu -3 309 2 192 319 116 0 chr10 81842345 81842414 -63746874 + MIR SINE MIR 40 116 -92 247 253 212 41 chr10 81842422 81842568 -63746720 + MIR SINE MIR 15 185 -77 567 220 152 35 chr10 81843469 81843761 -63745527 + MLT1H1 LTR MaLR 156 554 -1 312 27 0 0 chr10 81843769 81843806 -63745482 + (CA)n Simple_repeat Simple_repeat 1 37 0 893 216 55 51 chr10 81845044 81845299 -63743989 + MIR SINE MIR 5 260 -2 23 33 0 0 chr10 81845481 81845511 -63743777 + AT_rich Low_complexity Low_complexity 1 30 0 1110 167 142 29 chr10 81846731 81847012 -63742276 + L1ME2 LINE L1 5852 6164 0 2452 78 0 0 chr10 81848756 81849051 -63740237 - AluSc SINE Alu -14 295 1 1468 190 92 0 chr10 81849509 81849804 -63739484 - MER58B DNA MER1_type -19 322 1 424 240 13 82 chr10 81849921 81850087 -63739201 + MIR SINE MIR 3 154 -61 419 295 35 35 chr10 81850819 81851019 -63738269 - MIR SINE MIR -29 233 34 258 226 0 0 chr10 81851706 81851759 -63737529 + MER105 DNA DNA 1 53 -151 1210 220 66 0 chr10 81851763 81852022 -63737266 + MER58 DNA MER1_type 9 284 -57 556 229 100 0 chr10 81852032 81852172 -63737116 + MER105 DNA DNA 50 203 -1 393 312 112 39 chr10 81852981 81853366 -63735922 + LTR16C LTR ERVL 79 491 0 423 0 0 0 chr10 81853993 81854040 -63735248 + (CA)n Simple_repeat Simple_repeat 2 48 0 181 211 26 0 chr10 81855683 81855721 -63733567 - L2 LINE L2 -4 3268 3230 268 309 39 48 chr10 81856066 81856296 -63732992 + L2 LINE L2 2815 3042 -230 3197 102 173 33 chr10 81856392 81856940 -63732348 - MER51A LTR ERV1 -9 625 1 193 366 12 12 chr10 81856997 81857079 -63732209 + L2 LINE L2 3141 3222 -50 2496 216 55 86 chr10 81859522 81860374 -63728914 + LTR1B LTR ERV1 1 826 0 193 289 92 49 chr10 81860707 81860849 -63728439 - L2 LINE L2 0 3272 3125 205 208 38 38 chr10 81861133 81861186 -63728102 + MIR SINE MIR 23 75 -133 521 207 50 0 chr10 81861275 81861396 -63727892 + MER5A DNA MER1_type 1 127 -62 180 237 17 51 chr10 81861609 81861668 -63727620 - MER5A DNA MER1_type -12 177 121 * 245 308 31 46 chr10 81861623 81861753 -63727535 + MER5A DNA MER1_type 35 162 -27 277 269 35 35 chr10 81861869 81862010 -63727278 + L2 LINE L2 2599 2739 -575 2360 90 10 3 chr10 81862554 81862864 -63726424 + AluSq SINE Alu 1 312 -1 442 306 9 50 chr10 81863593 81863815 -63725473 + MIR SINE MIR 1 213 -49 257 319 88 59 chr10 81865285 81865558 -63723730 - L2 LINE L2 0 3272 2992 2148 102 0 30 chr10 81865682 81865985 -63723303 + AluSg SINE Alu 1 294 -16 322 252 179 0 chr10 81866279 81866402 -63722886 + MIR SINE MIR 86 230 -32 198 250 0 0 chr10 81866647 81866687 -63722601 - MER5A DNA MER1_type 0 189 150 3642 113 13 6 chr10 81866688 81867230 -63722058 + L1PB1 LINE L1 5605 6150 -1 2266 111 7 0 chr10 81867300 81867607 -63721681 - AluSg1 SINE Alu 0 309 1 277 260 0 26 chr10 81867635 81867712 -63721576 - MER5B DNA MER1_type -92 86 12 197 322 17 0 chr10 81867806 81867865 -63721423 + L2 LINE L2 3137 3196 -76 938 258 178 25 chr10 81869227 81869868 -63719420 + L2 LINE L2 2182 3025 -288 402 250 22 0 chr10 81869875 81869967 -63719321 - MER5A DNA MER1_type -83 106 13 2207 131 3 3 chr10 81870126 81870438 -63718850 - AluSx SINE Alu 0 312 1 180 0 0 0 chr10 81873074 81873094 -63716194 + (CTGGGG)n Simple_repeat Simple_repeat 3 22 0 986 238 9 9 chr10 81873539 81873762 -63715526 - MER58A DNA MER1_type 0 224 2 215 161 18 0 chr10 81874084 81874140 -63715148 + (TA)n Simple_repeat Simple_repeat 2 58 0 555 261 27 33 chr10 81874336 81874520 -63714768 + MIR3 SINE MIR 16 198 -10 280 259 47 0 chr10 81875015 81875100 -63714188 - MER5C DNA MER1_type -200 124 36 367 292 26 9 chr10 81875312 81875425 -63713863 - L2 LINE L2 0 3272 3158 346 274 105 0 chr10 81875773 81875897 -63713391 - MIR3 SINE MIR -1 207 71 193 316 0 0 chr10 81876398 81876474 -63712814 + MIR3 SINE MIR 109 184 -24 1162 178 50 11 chr10 81877074 81877355 -63711933 - L1 LINE L1 -1496 4650 4359 234 250 15 44 chr10 81877417 81877485 -63711803 + L2 LINE L2 3206 3271 -1 432 37 0 0 chr10 81877870 81877924 -63711364 + (CA)n Simple_repeat Simple_repeat 1 54 0 1417 192 29 4 chr10 81879442 81879718 -63709570 - AluJo SINE Alu -25 287 5 808 230 31 61 chr10 81879724 81879985 -63709303 + MER112 DNA MER1_type 8 260 0 894 208 135 56 chr10 81880008 81880364 -63708924 - MER58D DNA MER1_type 0 386 3 209 283 17 0 chr10 81881852 81881912 -63707376 + (CA)n Simple_repeat Simple_repeat 2 62 0 2570 74 0 0 chr10 81882460 81882771 -63706517 + AluY SINE Alu 1 311 0 1036 125 6 11 chr10 81884701 81884877 -63704411 - L1MA3 LINE L1 0 6305 6131 428 255 123 0 chr10 81885146 81885328 -63703960 + MIR SINE MIR 50 255 -7 286 323 51 13 chr10 81885451 81885609 -63703679 + MER117 DNA MER1_type 1 164 -33 210 296 0 0 chr10 81886570 81886624 -63702664 + (CATG)n Simple_repeat Simple_repeat 3 56 0 * 211 280 0 0 chr10 81886586 81886636 -63702652 + (CA)n Simple_repeat Simple_repeat 1 50 0 184 351 53 35 chr10 81886904 81887018 -63702270 + L2 LINE L2 3180 3295 -18 277 219 57 105 chr10 81887597 81887702 -63701586 + MIR3 SINE MIR 63 162 -46 201 81 27 27 chr10 81888246 81888283 -63701005 + (GA)n Simple_repeat Simple_repeat 2 38 0 681 292 17 8 chr10 81889021 81889261 -63700027 + MIR SINE MIR 18 259 -3 2484 135 53 19 chr10 81889581 81889995 -63699293 + MSTA LTR MaLR 1 428 0 283 256 13 13 chr10 81889995 81890067 -63699221 + MIR SINE MIR 7 78 -184 300 172 0 0 chr10 81890249 81890307 -63698981 + (TG)n Simple_repeat Simple_repeat 1 58 0 242 243 95 0 chr10 81890375 81890449 -63698839 - MIR SINE MIR -97 165 85 351 78 0 0 chr10 81892019 81892070 -63697218 + (CA)n Simple_repeat Simple_repeat 2 52 0 365 246 65 43 chr10 81892553 81892691 -63696597 + MIR3 SINE MIR 15 155 -53 331 220 0 0 chr10 81892695 81892754 -63696534 + AluJ/FLAM SINE Alu 1 59 -243 31 0 0 0 chr10 81892763 81892794 -63696494 + AT_rich Low_complexity Low_complexity 1 31 0 2268 111 6 19 chr10 81892799 81893114 -63696174 + AluSx SINE Alu 1 311 -1 189 311 16 0 chr10 81893114 81893175 -63696113 + MIR3 SINE MIR 145 206 -2 751 214 57 82 chr10 81894649 81894780 -63694508 - ORSL DNA AcHobo 0 275 142 2142 97 4 0 chr10 81894780 81895058 -63694230 - AluSg SINE Alu -31 279 1 751 214 57 82 chr10 81895058 81895207 -63694081 - ORSL DNA AcHobo -133 142 2 349 316 40 33 chr10 81895573 81895827 -63693461 + L2 LINE L2 2794 3049 -223 798 259 94 23 chr10 81895951 81896367 -63692921 - LTR16C LTR ERVL -5 486 4 23 0 0 0 chr10 81896997 81897020 -63692268 + AT_rich Low_complexity Low_complexity 1 23 0 244 294 200 25 chr10 81897497 81897657 -63691631 + MIR3 SINE MIR 4 191 -17 539 272 46 12 chr10 81898422 81898595 -63690693 - MIR SINE MIR -8 254 76 306 309 22 66 chr10 81899079 81899215 -63690073 + L2 LINE L2 3142 3271 -1 669 251 75 50 chr10 81899224 81899463 -63689825 - MLT1J2 LTR MaLR -2 448 204 261 256 0 58 chr10 81899967 81900053 -63689235 + MIR SINE MIR 60 140 -122 365 308 28 28 chr10 81901721 81901864 -63687424 + MIR3 SINE MIR 4 146 -62 941 214 0 0 chr10 81902688 81902894 -63686394 - L1MA4 LINE L1 -35 6265 6060 23 0 0 0 chr10 81902975 81902998 -63686290 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr10 81903777 81903799 -63685489 + AT_rich Low_complexity Low_complexity 1 22 0 267 346 0 1 chr10 81904296 81904408 -63684880 - MIR SINE MIR -62 146 45 1189 312 58 7 chr10 81905755 81906188 -63683100 + MER115 DNA AcHobo 1 455 -238 24 0 0 0 chr10 81906399 81906423 -63682865 + AT_rich Low_complexity Low_complexity 1 24 0 267 244 0 0 chr10 81907093 81907171 -63682117 + CT-rich Low_complexity Low_complexity 5 82 0 22 0 0 0 chr10 81909978 81910000 -63679288 + AT_rich Low_complexity Low_complexity 1 22 0 2361 88 3 13 chr10 81910110 81910416 -63678872 + AluSg SINE Alu 1 303 -7 356 305 35 21 chr10 81910564 81910705 -63678583 + MIR3 SINE MIR 66 208 0 285 75 0 0 chr10 81911361 81911401 -63677887 + (CA)n Simple_repeat Simple_repeat 2 41 0 445 261 176 11 chr10 81911845 81912033 -63677255 - MIR SINE MIR -32 230 12 398 331 47 6 chr10 81912159 81912331 -63676957 - MIR SINE MIR -55 207 29 751 258 107 4 chr10 81912672 81912897 -63676391 + MIR SINE MIR 5 252 -10 387 312 35 12 chr10 81914617 81914787 -63674501 + MER117 DNA MER1_type 1 174 -23 203 91 0 68 chr10 81916697 81916741 -63672547 + (CA)n Simple_repeat Simple_repeat 2 42 0 599 236 80 5 chr10 81917986 81918185 -63671103 - MIR SINE MIR -3 259 46 445 190 0 0 chr10 81918480 81918559 -63670729 - MER116 DNA Mariner 0 80 2 229 353 43 14 chr10 81918720 81918859 -63670429 + MIR3 SINE MIR 44 186 -22 356 313 41 14 chr10 81919753 81919900 -63669388 + MIR3 SINE MIR 10 160 -48 538 241 37 31 chr10 81919906 81920068 -63669220 + Charlie8 DNA MER1_type 7 169 -2248 1153 254 83 95 chr10 81920072 81921830 -63667458 + L1ME LINE L1 6 1709 -4371 218 175 0 0 chr10 81921892 81921932 -63667356 + L2 LINE L2 3271 3310 -3 469 319 28 0 chr10 81922245 81922427 -63666861 + MIR SINE MIR 3 189 -73 222 118 0 0 chr10 81924938 81924972 -63664316 + (CA)n Simple_repeat Simple_repeat 2 35 0 264 311 74 33 chr10 81925006 81925128 -63664160 - L2 LINE L2 -5 3267 3141 24 32 0 0 chr10 81928501 81928532 -63660756 + AT_rich Low_complexity Low_complexity 1 31 0 2008 173 25 8 chr10 81928850 81929209 -63660079 + MLT1A1 LTR MaLR 1 365 0 224 325 115 37 chr10 81929316 81929507 -63659781 - MIR3 SINE MIR 0 208 3 236 29 0 29 chr10 81929717 81929751 -63659537 + (TAAAA)n Simple_repeat Simple_repeat 3 35 0 204 309 0 0 chr10 81931781 81931836 -63657452 - MER91B DNA MER1_type -134 56 2 1424 188 11 14 chr10 81933098 81933374 -63655914 - AluJo SINE Alu 0 312 38 338 250 98 22 chr10 81935215 81935388 -63653900 - L1M3 LINE L1 -504 5676 5498 269 268 14 0 chr10 81936190 81936261 -63653027 + MIR SINE MIR 60 131 -131 233 357 0 10 chr10 81936403 81936501 -63652787 + (CA)n Simple_repeat Simple_repeat 2 98 0 360 0 0 0 chr10 81937659 81937699 -63651589 + (ATG)n Simple_repeat Simple_repeat 1 40 0 942 258 41 4 chr10 81937702 81937946 -63651342 - MIR SINE MIR -6 256 4 493 230 20 0 chr10 81937983 81938083 -63651205 + MIR SINE MIR 47 148 -114 329 354 49 6 chr10 81938454 81938618 -63650670 + L3 LINE CR1 1297 1467 -110 583 253 127 0 chr10 81939643 81939809 -63649479 + MIR SINE MIR 7 193 -69 1434 136 56 36 chr10 81939830 81940081 -63649207 + AluSg SINE Alu 49 304 -6 183 156 0 0 chr10 81940105 81940137 -63649151 + (CCA)n Simple_repeat Simple_repeat 2 33 0 2139 95 0 7 chr10 81945947 81946221 -63643067 - AluSc SINE Alu -18 291 20 208 211 0 0 chr10 81946462 81946500 -63642788 + (CA)n Simple_repeat Simple_repeat 1 38 0 1209 189 18 0 chr10 81946641 81946858 -63642430 + AluJo SINE Alu 85 305 -7 416 335 83 34 chr10 81947605 81947634 -63641654 + L3 LINE CR1 421 447 -1130 2467 78 3 0 chr10 81947634 81947930 -63641358 + AluSc SINE Alu 1 297 -12 416 335 83 34 chr10 81947930 81948285 -63641003 + L3 LINE CR1 447 824 -753 242 345 35 14 chr10 81948387 81948532 -63640756 + L1ME4a LINE L1 5255 5402 -2406 746 266 59 11 chr10 81948649 81948935 -63640353 + L1ME4a LINE L1 5578 5877 -244 227 230 0 40 chr10 81949176 81949250 -63640038 - L1MC4 LINE L1 -1358 6684 6614 * 237 203 51 0 chr10 81949198 81949257 -63640031 + L1MC4 LINE L1 6649 6710 -1332 249 289 105 7 chr10 81949542 81949694 -63639594 + L3 LINE CR1 1065 1231 -346 241 272 114 44 chr10 81949830 81949944 -63639344 + L3 LINE CR1 1432 1553 -24 287 293 60 0 chr10 81950269 81950385 -63638903 - MIR3 SINE MIR -3 205 83 288 269 13 0 chr10 81950762 81950840 -63638448 - L2 LINE L2 0 3272 3194 260 377 19 7 chr10 81953036 81953190 -63636098 + MIR3 SINE MIR 41 196 -12 26 30 0 0 chr10 81953643 81953676 -63635612 + AT_rich Low_complexity Low_complexity 1 33 0 239 189 263 74 chr10 81953951 81954046 -63635242 - L2 LINE L2 0 3313 3201 236 265 29 29 chr10 81954465 81954533 -63634755 - L2 LINE L2 -6 3266 3199 185 229 0 21 chr10 81956265 81956313 -63632975 + MIR SINE MIR 209 255 -7 316 311 98 12 chr10 81956781 81956945 -63632343 + MER5A DNA MER1_type 12 189 0 325 203 51 34 chr10 81956993 81957111 -63632177 - HsTC2 DNA Tc2 -2 1896 1777 879 254 171 9 chr10 81957139 81957485 -63631803 - HsTC2 DNA Tc2 -1493 405 4 540 267 23 0 chr10 81957619 81957750 -63631538 + MER94 DNA DNA 1 134 0 2053 113 0 13 chr10 81957879 81958181 -63631107 + AluSc SINE Alu 1 298 -11 1132 198 33 0 chr10 81958347 81958559 -63630729 + MER20 DNA MER1_type 1 219 0 854 257 30 13 chr10 81959261 81959498 -63629790 - MLT1C LTR MaLR -3 464 224 1108 173 22 44 chr10 81959560 81959785 -63629503 - MLT1C LTR MaLR -244 223 4 199 256 0 0 chr10 81960112 81960155 -63629133 + MIR SINE MIR 214 256 -6 208 216 14 27 chr10 81960328 81960402 -63628886 + A-rich Low_complexity Low_complexity 4 76 0 1575 258 104 20 chr10 81961044 81961591 -63627697 + MLT1E LTR MaLR 1 593 0 551 293 90 0 chr10 81962260 81962427 -63626861 - LTR16C LTR ERVL -6 485 304 699 231 88 6 chr10 81962433 81962575 -63626713 - MER58A DNA MER1_type -2196 224 62 405 90 0 0 chr10 81962575 81962642 -63626646 + (TA)n Simple_repeat Simple_repeat 2 68 0 699 231 88 6 chr10 81962642 81962681 -63626607 - MER58A DNA MER1_type -2358 62 28 386 253 83 29 chr10 81962721 81962944 -63626344 - LTR16C LTR ERVL -199 292 3 21 0 0 0 chr10 81963438 81963459 -63625829 + AT_rich Low_complexity Low_complexity 1 21 0 2241 95 0 0 chr10 81966139 81966434 -63622854 + AluY SINE Alu 3 297 -14 659 222 78 6 chr10 81967548 81967715 -63621573 - MER97c DNA MER1_type? -911 179 1 465 262 28 28 chr10 81967716 81967857 -63621431 + MIR3 SINE MIR 40 180 -28 207 303 0 15 chr10 81969438 81969504 -63619784 + G-rich Low_complexity Low_complexity 4 68 0 477 50 0 0 chr10 81969705 81969765 -63619523 + (CA)n Simple_repeat Simple_repeat 2 61 0 2138 75 4 0 chr10 81970785 81971100 -63618188 - AluY SINE Alu 0 316 1 870 138 31 31 chr10 81971106 81971265 -63618023 - FRAM SINE Alu 0 40 1 2417 80 0 0 chr10 81971722 81972033 -63617255 + AluY SINE Alu 1 311 0 220 257 30 163 chr10 81972068 81972270 -63617018 - MER5A DNA MER1_type 0 189 4 217 214 12 12 chr10 81972674 81972758 -63616530 + (TTCA)n Simple_repeat Simple_repeat 1 84 0 291 325 103 56 chr10 81973083 81973335 -63615953 + L2 LINE L2 3025 3288 -25 21 0 0 0 chr10 81973770 81973791 -63615497 + AT_rich Low_complexity Low_complexity 1 21 0 329 306 180 16 chr10 81974170 81974353 -63614935 - MIR SINE MIR -45 217 5 1294 198 29 117 chr10 81974353 81974763 -63614525 + MLT1A2 LTR MaLR 1 374 0 202 151 12 70 chr10 81975056 81975142 -63614146 + (TAAA)n Simple_repeat Simple_repeat 2 82 0 299 362 11 11 chr10 81975641 81975735 -63613553 + MIR3 SINE MIR 3 96 -112 225 196 0 39 chr10 81975739 81975790 -63613498 + L2 LINE L2 3246 3294 -19 292 349 20 53 chr10 81977623 81977775 -63611513 + L2 LINE L2 3126 3272 0 468 304 198 0 chr10 81978018 81978235 -63611053 + MIR SINE MIR 3 262 0 189 244 28 45 chr10 81978261 81978349 -63610939 - MIR SINE MIR -60 148 58 190 265 29 15 chr10 81979083 81979151 -63610137 + MIR SINE MIR 81 149 -113 724 279 73 59 chr10 81979207 81979699 -63609589 + L1ME4a LINE L1 5622 6120 -1 2455 57 0 13 chr10 81979718 81980033 -63609255 + AluY SINE Alu 1 311 0 181 380 13 0 chr10 81980044 81980123 -63609165 + MIR SINE MIR 141 220 -42 297 260 50 30 chr10 81981166 81981266 -63608022 - MIR SINE MIR -64 144 43 255 301 115 39 chr10 81982948 81983001 -63606287 + MIR SINE MIR 61 109 -153 2043 125 0 0 chr10 81983001 81983290 -63605998 - AluSx SINE Alu -13 299 11 255 301 115 39 chr10 81983290 81983392 -63605896 + MIR SINE MIR 109 228 -34 285 29 0 0 chr10 81983755 81983789 -63605499 + (TTTTTA)n Simple_repeat Simple_repeat 4 37 0 532 239 165 18 chr10 81984520 81984738 -63604550 + MIR SINE MIR 13 262 0 430 284 65 0 chr10 81985057 81985212 -63604076 - MER117 DNA MER1_type -31 166 2 228 271 29 0 chr10 81985548 81985618 -63603670 + L1MC4 LINE L1 6654 6725 -1317 213 289 82 52 chr10 81985726 81985823 -63603465 - MIR SINE MIR -111 151 52 435 279 47 43 chr10 81986921 81987106 -63602182 + MIR SINE MIR 18 207 -55 2148 128 102 10 chr10 81987153 81987545 -63601743 + MSTA LTR MaLR 1 428 0 267 355 97 32 chr10 81987562 81987748 -63601540 - L2 LINE L2 -2 3270 3073 284 279 199 32 chr10 81987859 81988110 -63601178 - L2 LINE L2 -353 2961 2669 822 216 70 0 chr10 81989286 81989457 -63599831 + MER20 DNA MER1_type 37 219 0 1039 211 95 69 chr10 81989458 81989847 -63599441 + MER113 DNA MER1_type? 95 493 -28 327 283 0 9 chr10 81990191 81990297 -63598991 + MER103 DNA DNA 5 109 -57 978 306 67 25 chr10 81990938 81991457 -63597831 + MLT1K LTR MaLR 15 555 -33 2013 135 0 0 chr10 81992796 81993093 -63596195 + AluSx SINE Alu 1 297 -15 263 274 0 0 chr10 81993105 81993167 -63596121 + (CATATA)n Simple_repeat Simple_repeat 5 66 0 618 325 26 32 chr10 81993667 81993915 -63595373 + MIR SINE MIR 3 247 -15 2122 108 0 0 chr10 81994882 81995179 -63594109 - AluSc SINE Alu -12 297 1 265 261 15 0 chr10 81995402 81995467 -63593821 + L2 LINE L2 3246 3311 -2 282 269 15 0 chr10 81996350 81996417 -63592871 - L2 LINE L2 0 3272 3205 615 179 8 8 chr10 81996637 81996760 -63592528 + L1MC1 LINE L1 6211 6333 0 320 281 84 36 chr10 81997170 81997337 -63591951 + MIR SINE MIR 87 261 -1 198 233 0 0 chr10 81997532 81997592 -63591696 + (TAA)n Simple_repeat Simple_repeat 1 60 0 832 290 69 1 chr10 81997593 81997810 -63591478 - MIR SINE MIR 0 262 34 1462 249 64 35 chr10 81998125 81998612 -63590676 + MLT1J LTR MaLR 11 511 0 961 248 30 9 chr10 81998726 81998956 -63590332 - MIR SINE MIR -12 250 16 189 171 0 0 chr10 81999604 81999639 -63589649 + A-rich Low_complexity Low_complexity 4 38 0 208 282 42 28 chr10 81999850 81999894 -63589394 - L2 LINE L2 0 3313 3269 1051 254 52 16 chr10 81999894 82000146 -63589142 + MIR SINE MIR 2 262 0 * 1199 300 76 36 chr10 82000145 82000954 -63588334 - L2 LINE L2 -18 3295 2443 300 245 141 43 chr10 82001505 82001668 -63587620 + MIR SINE MIR 49 227 -35 197 409 53 8 chr10 82001739 82001871 -63587417 + L2 LINE L2 3095 3232 -40 249 305 0 0 chr10 82001917 82001976 -63587312 - MIR SINE MIR -11 251 193 891 242 79 9 chr10 82001986 82002213 -63587075 + MIR SINE MIR 6 248 -14 668 263 29 24 chr10 82002172 82002381 -63586907 - MIR SINE MIR -21 241 32 * 2273 94 0 3 chr10 82003032 82003331 -63585957 + AluSq SINE Alu 2 299 -14 723 216 41 62 chr10 82003467 82003661 -63585627 + MIR SINE MIR 47 236 -26 474 18 0 0 chr10 82003677 82003732 -63585556 + (CTG)n Simple_repeat Simple_repeat 1 55 0 216 0 0 0 chr10 82003857 82003881 -63585407 + (CCCCAG)n Simple_repeat Simple_repeat 5 28 0 23 33 0 0 chr10 82004444 82004474 -63584814 + AT_rich Low_complexity Low_complexity 1 30 0 284 319 34 17 chr10 82006440 82006559 -63582729 - MIR SINE MIR -58 150 30 410 282 23 23 chr10 82009908 82010039 -63579249 - MIR SINE MIR -112 150 20 248 298 113 24 chr10 82010134 82010258 -63579030 - L2 LINE L2 0 3272 3138 631 253 5 50 chr10 82010315 82010513 -63578775 - MIR SINE MIR -28 234 46 267 230 0 35 chr10 82010742 82010829 -63578459 - MER113 DNA MER1_type? -429 92 9 559 251 44 96 chr10 82011486 82011685 -63577603 - MIR SINE MIR 0 262 79 2070 147 10 3 chr10 82011685 82011992 -63577296 + AluSx SINE Alu 1 309 -3 559 251 44 96 chr10 82011992 82012063 -63577225 - MIR SINE MIR -183 79 6 190 316 51 31 chr10 82013087 82013185 -63576103 - MIR SINE MIR -93 115 16 1030 189 0 5 chr10 82014251 82014441 -63574847 - MER5A DNA MER1_type 0 189 1 282 191 16 0 chr10 82014442 82014505 -63574783 - MIR3 SINE MIR -49 159 96 2763 169 22 0 chr10 82014557 82015014 -63574274 + MLT1C LTR MaLR 1 467 0 293 302 17 43 chr10 82015206 82015322 -63573966 + L1ME4a LINE L1 5547 5659 -462 274 227 28 85 chr10 82015458 82015599 -63573689 + L1ME4a LINE L1 5924 6056 -65 2112 122 0 16 chr10 82015836 82016147 -63573141 + AluY SINE Alu 1 306 -5 305 315 0 9 chr10 82017004 82017115 -63572173 + (TA)n Simple_repeat Simple_repeat 2 111 0 186 43 0 0 chr10 82017210 82017233 -63572055 + (TG)n Simple_repeat Simple_repeat 1 23 0 2269 119 19 38 chr10 82017659 82018030 -63571258 + THE1B LTR MaLR 1 364 0 746 223 81 57 chr10 82019847 82020130 -63569158 + MLT1J LTR MaLR 84 373 -138 1358 227 0 4 chr10 82020558 82020818 -63568470 + MLT1F1 LTR MaLR 307 565 -2 2323 218 114 15 chr10 82021650 82022316 -63566972 - HsTC2a DNA Tc2 -12 732 1 1421 223 103 83 chr10 82022476 82022983 -63566305 - MLT1E2 LTR MaLR -106 520 1 1835 142 0 30 chr10 82023373 82023669 -63565619 + AluJo SINE Alu 2 288 -24 2252 112 7 0 chr10 82023698 82023994 -63565294 + AluSx SINE Alu 2 299 -13 7987 67 12 0 chr10 82024442 82025498 -63563790 + L1P LINE L1 4208 5276 -870 1463 254 4 79 chr10 82025640 82026136 -63563152 - L1M4 LINE L1 -1924 4222 3764 317 194 15 0 chr10 82026875 82026942 -63562346 - L1M4 LINE L1 -3705 2441 2374 1009 187 30 15 chr10 82026944 82027147 -63562141 - MER61C LTR ERV1 0 434 229 2473 75 0 10 chr10 82028351 82028658 -63560630 + AluY SINE Alu 1 304 -7 282 297 63 0 chr10 82030953 82031064 -63558224 - MIR3 SINE MIR -45 163 46 1503 194 85 15 chr10 82031354 82031695 -63557593 + MLT1A1 LTR MaLR 1 365 0 192 402 0 11 chr10 82031863 82031955 -63557333 + MIR3 SINE MIR 67 157 -51 184 296 142 18 chr10 82032023 82032192 -63557096 + MIR SINE MIR 58 247 -15 468 248 8 8 chr10 82032211 82032336 -63556952 - L2 LINE L2 0 3313 3189 262 296 132 6 chr10 82033791 82033950 -63555338 + MIR SINE MIR 84 262 0 287 306 0 0 chr10 82034040 82034112 -63555176 - MIR SINE MIR -101 107 36 387 370 41 28 chr10 82034260 82034649 -63554639 + L3 LINE CR1 602 995 -582 832 119 0 42 chr10 82038045 82038188 -63551100 + L1MA2 LINE L1 6168 6304 0 18368 36 1 1 chr10 82038405 82041236 -63548052 - L1PA4 LINE L1 -149 6006 3174 258 186 0 0 chr10 82041993 82042036 -63547252 - MIR SINE MIR -172 90 48 225 274 97 24 chr10 82042274 82042398 -63546890 - MIR SINE MIR -50 212 80 186 43 0 0 chr10 82042821 82042844 -63546444 + (GA)n Simple_repeat Simple_repeat 1 23 0 298 302 108 20 chr10 82043259 82043409 -63545879 + MIR SINE MIR 18 147 -61 692 234 46 6 chr10 82043616 82043791 -63545497 - MIR SINE MIR -76 186 5 1304 187 122 51 chr10 82045123 82045614 -63543674 - MER69 DNA AcHobo 0 2526 2001 929 107 11 119 chr10 82045614 82045791 -63543497 + AluSg/x SINE Alu 134 291 -21 1362 271 40 25 chr10 82045936 82046339 -63542949 - MER69 DNA AcHobo -2112 414 6 222 91 0 0 chr10 82047089 82047122 -63542166 + (T)n Simple_repeat Simple_repeat 1 33 0 189 0 0 0 chr10 82047328 82047349 -63541939 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 189 0 0 0 chr10 82047350 82047371 -63541917 + (GAAAA)n Simple_repeat Simple_repeat 5 25 0 269 316 0 0 chr10 82047612 82047691 -63541597 + MER103 DNA DNA 4 82 -84 2318 95 0 16 chr10 82047693 82047997 -63541291 - AluSx SINE Alu -13 299 1 1121 226 51 14 chr10 82048032 82048500 -63540788 - MER74A LTR ERVL -28 594 1 528 314 78 26 chr10 82048538 82048932 -63540356 - L1ME LINE L1 -352 5818 5410 1112 220 39 9 chr10 82049283 82049515 -63539773 + MER8 DNA MER2_type 1 239 0 213 293 32 16 chr10 82049680 82049803 -63539485 + (TA)n Simple_repeat Simple_repeat 2 126 0 1684 136 87 0 chr10 82050086 82050350 -63538938 - AluJb SINE Alu -25 287 1 225 0 0 0 chr10 82052693 82052718 -63536570 + (A)n Simple_repeat Simple_repeat 1 25 0 303 307 150 13 chr10 82055077 82055230 -63534058 + MIR3 SINE MIR 32 205 -3 412 299 49 11 chr10 82060174 82060358 -63528930 - L2 LINE L2 -5 3308 3118 2773 76 3 0 chr10 82060705 82061059 -63528229 - THE1A LTR MaLR 0 355 1 716 324 143 39 chr10 82061075 82062186 -63527102 - L2 LINE L2 -561 2753 1527 395 219 18 18 chr10 82062914 82063028 -63526260 - L1ME4a LINE L1 -45 6076 5963 3026 220 57 83 chr10 82063552 82064087 -63525201 - L1M4 LINE L1 -2456 3690 3143 4443 113 15 62 chr10 82064087 82064812 -63524476 - LTR8 LTR ERV1 0 691 1 3026 220 57 83 chr10 82064812 82065628 -63523660 - L1M4 LINE L1 -3003 3143 2374 1797 141 19 26 chr10 82065630 82065969 -63523319 - MER61B LTR ERV1 0 425 1 656 275 106 33 chr10 82066131 82066462 -63522826 - L1MCc LINE L1 -5836 587 233 418 212 60 21 chr10 82066467 82066604 -63522684 - L1MCc LINE L1 -6285 656 24 2037 134 3 3 chr10 82066887 82067178 -63522110 + AluSx SINE Alu 2 292 -20 2159 176 32 58 chr10 82067181 82067687 -63521601 - L1MB5 LINE L1 -8 6166 5677 * 2235 175 150 7 chr10 82067682 82068077 -63521211 - L1PA15 LINE L1 -6 6159 5672 1752 160 20 7 chr10 82068077 82068377 -63520911 - AluJo SINE Alu -5 307 4 2235 175 150 7 chr10 82068377 82068503 -63520785 - L1PA15 LINE L1 -493 5672 5565 209 287 25 76 chr10 82068684 82068841 -63520447 + L3 LINE CR1 1331 1479 -98 318 296 105 43 chr10 82069099 82069200 -63520088 - L1ME LINE L1 -5775 295 179 2269 112 0 0 chr10 82069200 82069494 -63519794 + AluSg1 SINE Alu 1 294 -15 318 296 105 43 chr10 82069494 82069554 -63519734 - L1ME LINE L1 -5891 179 124 206 95 24 0 chr10 82069554 82069596 -63519692 + (TG)n Simple_repeat Simple_repeat 2 44 0 513 270 191 68 chr10 82069709 82070153 -63519135 + LTR33 LTR ERVL 16 514 -7 727 248 37 114 chr10 82070293 82070757 -63518531 + L2 LINE L2 2841 3268 -45 1023 222 76 93 chr10 82070775 82071181 -63518107 + MLT1C LTR MaLR 1 399 -68 2253 114 7 0 chr10 82071181 82071478 -63517810 - AluSx SINE Alu -13 299 1 1023 222 76 93 chr10 82071478 82071544 -63517744 + MLT1C LTR MaLR 399 465 -2 257 316 86 0 chr10 82071917 82072056 -63517232 - L3b LINE CR1 -208 1375 1225 969 143 107 0 chr10 82072647 82072815 -63516473 - MER5A DNA MER1_type 0 189 4 779 101 0 93 chr10 82073175 82073314 -63515974 - L1PA8 LINE L1 0 6172 6047 246 337 6 34 chr10 82073902 82074077 -63515211 + CT-rich Low_complexity Low_complexity 5 174 0 517 273 141 9 chr10 82074602 82074822 -63514466 + L3 LINE CR1 1169 1417 -160 2036 126 44 0 chr10 82075500 82075794 -63513494 - AluSx SINE Alu -5 307 1 1099 234 10 0 chr10 82076528 82076737 -63512551 - MER58A DNA MER1_type -13 211 1 266 150 0 33 chr10 82077187 82077247 -63512041 + (TATATG)n Simple_repeat Simple_repeat 5 62 0 198 143 0 0 chr10 82077253 82077288 -63512000 + (TTCA)n Simple_repeat Simple_repeat 4 38 0 319 293 9 9 chr10 82080697 82080803 -63508485 - MIR3 SINE MIR -28 180 75 890 167 11 23 chr10 82082855 82083029 -63506259 + MER5A DNA MER1_type 18 189 0 247 281 58 58 chr10 82083033 82083154 -63506134 + L2 LINE L2 3193 3313 0 2006 119 63 0 chr10 82083818 82084104 -63505184 + AluSx SINE Alu 9 312 0 7716 174 110 21 chr10 82084456 82086001 -63503287 - MER52A LTR ERV1 0 1755 1 266 182 208 0 chr10 82086313 82086390 -63502898 + L2 LINE L2 3208 3300 -13 184 243 14 54 chr10 82086458 82086532 -63502756 - L2 LINE L2 -83 3230 3160 277 326 8 23 chr10 82089470 82089602 -63499686 - MIR SINE MIR -63 145 16 4332 108 7 0 chr10 82089936 82090546 -63498742 + L1PA14 LINE L1 5547 6160 -1 197 274 194 16 chr10 82090639 82090763 -63498525 - MIR3 SINE MIR -31 177 32 369 0 0 0 chr10 82091667 82091708 -63497580 + (TG)n Simple_repeat Simple_repeat 2 42 0 21 0 0 0 chr10 82091757 82091778 -63497510 + AT_rich Low_complexity Low_complexity 1 21 0 228 111 0 0 chr10 82092571 82092607 -63496681 + (TG)n Simple_repeat Simple_repeat 1 36 0 403 243 126 0 chr10 82092931 82093042 -63496246 + L2 LINE L2 3188 3312 -1 454 236 139 24 chr10 82094706 82094906 -63494382 + MLT1H LTR MaLR 1 202 -347 2116 143 3 37 chr10 82097367 82097716 -63491572 - MER1B DNA MER1_type 0 337 1 187 192 167 0 chr10 82099038 82099116 -63490172 + MIR SINE MIR 107 197 -65 1071 230 105 42 chr10 82099290 82099651 -63489637 - MLT1B LTR MaLR -6 384 1 364 245 110 19 chr10 82101254 82101460 -63487828 + MIR SINE MIR 22 248 -14 183 42 0 0 chr10 82102182 82102206 -63487082 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 219 150 0 25 chr10 82102552 82102592 -63486696 + (TG)n Simple_repeat Simple_repeat 2 40 0 325 172 35 0 chr10 82103823 82103881 -63485407 - MLT1J2 LTR MaLR 0 450 391 717 285 95 0 chr10 82103923 82104144 -63485144 - MLT1J2 LTR MaLR -139 311 70 1226 179 35 74 chr10 82104150 82104435 -63484853 + MLT1B LTR MaLR 3 276 -114 857 225 9 5 chr10 82104604 82104822 -63484466 + L1ME1 LINE L1 5095 5313 -833 658 55 22 0 chr10 82104823 82104914 -63484374 - AluY SINE Alu -13 298 206 3007 193 36 81 chr10 82104929 82105813 -63483475 + L1ME1 LINE L1 5317 6160 -6 440 183 78 0 chr10 82106080 82106195 -63483093 - MER5C DNA MER1_type -200 124 1 25 31 0 0 chr10 82106223 82106255 -63483033 + AT_rich Low_complexity Low_complexity 1 32 0 269 194 75 0 chr10 82106490 82106557 -63482731 + L1ME4a LINE L1 6049 6120 -1 231 133 33 17 chr10 82107172 82107232 -63482056 + GA-rich Low_complexity Low_complexity 4 64 0 2194 83 47 0 chr10 82107458 82107734 -63481554 + AluSq SINE Alu 1 289 -24 2436 203 65 24 chr10 82107757 82108294 -63480994 - MER119 DNA MER1_type -18 565 7 1539 172 25 21 chr10 82108806 82109085 -63480203 + AluJo SINE Alu 11 290 -22 417 20 0 0 chr10 82109456 82109506 -63479782 + (CA)n Simple_repeat Simple_repeat 2 51 0 252 367 50 0 chr10 82109630 82109750 -63479538 - MIR SINE MIR -64 144 19 3576 144 83 10 chr10 82109775 82110388 -63478900 - L1MB2 LINE L1 -10 6161 5504 557 278 31 12 chr10 82111467 82111629 -63477659 + MIR SINE MIR 3 167 -95 254 239 23 80 chr10 82111726 82111814 -63477474 + L2 LINE L2 3186 3268 -4 222 257 69 30 chr10 82112550 82112651 -63476637 - L3 LINE CR1 -102 1475 1371 1510 174 33 19 chr10 82112673 82112943 -63476345 - AluJb SINE Alu -38 274 1 356 283 44 39 chr10 82113045 82113250 -63476038 - L3 LINE CR1 -225 1352 1147 235 229 125 31 chr10 82113377 82113473 -63475815 - MIR3 SINE MIR -4 204 100 2202 124 3 0 chr10 82115667 82115965 -63473323 - AluSx SINE Alu -13 299 1 1558 72 5 24 chr10 82116303 82116511 -63472777 - AluY SINE Alu -10 301 98 224 235 12 71 chr10 82116650 82116735 -63472553 + GA-rich Low_complexity Low_complexity 3 82 0 580 259 287 3 chr10 82117356 82117645 -63471643 - L2 LINE L2 -5 3308 2938 842 258 53 13 chr10 82117875 82118100 -63471188 + MIR SINE MIR 29 262 0 1712 187 13 13 chr10 82118704 82119009 -63470279 + AluJb SINE Alu 1 305 -7 252 266 31 0 chr10 82122725 82122789 -63466499 + (CATG)n Simple_repeat Simple_repeat 2 67 0 24 32 0 0 chr10 82124480 82124511 -63464777 + AT_rich Low_complexity Low_complexity 1 31 0 880 278 28 8 chr10 82125300 82125555 -63463733 + MIR SINE MIR 1 260 -2 1680 145 7 24 chr10 82126144 82126441 -63462847 - AluSq SINE Alu -19 294 3 462 214 70 82 chr10 82126995 82127266 -63462022 - L1ME LINE L1 -515 5606 5338 225 275 25 62 chr10 82127337 82127417 -63461871 + L2 LINE L2 3237 3313 0 2105 74 0 64 chr10 82128306 82128602 -63460686 - AluY SINE Alu -34 277 1 2162 170 76 36 chr10 82130974 82131421 -63457867 - MLT1C LTR MaLR 0 467 3 212 204 0 0 chr10 82131537 82131581 -63457707 + L2 LINE L2 3270 3313 0 2727 162 14 65 chr10 82135573 82136029 -63453259 + MER34C LTR ERV1 41 464 -121 1736 203 79 85 chr10 82136029 82136674 -63452614 + LTR48B LTR ERV1 4 644 0 2727 162 14 65 chr10 82136674 82136791 -63452497 + MER34C LTR ERV1 464 585 0 354 263 8 45 chr10 82138002 82138135 -63451153 - L1ME3A LINE L1 -273 5897 5770 45320 37 2 1 chr10 82138148 82144319 -63444969 - L1PA4 LINE L1 0 6155 4 696 253 4 38 chr10 82144392 82144629 -63444659 - L1ME3A LINE L1 -521 5641 5413 331 356 22 7 chr10 82144799 82144934 -63444354 + MIR SINE MIR 16 152 -56 331 263 154 61 chr10 82146792 82147039 -63442249 + L2 LINE L2 3032 3301 -12 346 140 40 120 chr10 82147044 82147144 -63442144 - MER34C LTR ERV1 0 585 494 493 277 29 0 chr10 82147275 82147412 -63441876 - L1ME3A LINE L1 -1907 4239 4099 4585 183 18 13 chr10 82147516 82148321 -63440967 - L1MB7 LINE L1 -40 6144 5327 2356 87 0 10 chr10 82148321 82148620 -63440668 - AluSg SINE Alu -14 296 1 4585 183 18 13 chr10 82148620 82149054 -63440234 - L1MB7 LINE L1 -857 5327 4897 260 198 79 59 chr10 82149027 82149128 -63440160 - L1MB7 LINE L1 -2017 4129 4027 * 580 287 65 29 chr10 82150213 82150602 -63438686 - MLT1J LTR MaLR -58 453 5 279 270 14 0 chr10 82151205 82151279 -63438009 + MLT1I LTR MaLR 329 403 -6 1635 161 17 30 chr10 82152813 82153112 -63436176 + AluJo SINE Alu 3 297 -15 2180 143 29 18 chr10 82153221 82153564 -63435724 - MER7A DNA MER2_type -1 345 1 213 171 0 0 chr10 82154146 82154181 -63435107 - MIR3 SINE MIR -16 192 158 356 315 83 28 chr10 82154186 82154475 -63434813 + L1ME3 LINE L1 5522 5826 -336 840 102 25 0 chr10 82154770 82154888 -63434400 + L1MC/D LINE L1 5396 5516 -817 198 296 70 14 chr10 82155350 82155421 -63433867 - L2 LINE L2 -61 3211 3137 229 189 263 74 chr10 82156500 82156595 -63432693 + L2 LINE L2 3201 3313 0 22 91 0 0 chr10 82156870 82156903 -63432385 + AT_rich Low_complexity Low_complexity 1 33 0 2099 121 0 3 chr10 82157632 82157930 -63431358 + AluSc SINE Alu 1 297 -12 4741 156 21 8 chr10 82161602 82162421 -63426867 + L1MC1 LINE L1 5500 6328 -5 512 243 126 42 chr10 82162573 82162836 -63426452 + L1MC5 LINE L1 7609 7893 -68 413 230 3 133 chr10 82164476 82164598 -63424690 + MIR SINE MIR 16 109 -138 2365 166 47 0 chr10 82164598 82165007 -63424281 - MSTA LTR MaLR 0 428 1 413 230 3 133 chr10 82165007 82165077 -63424211 + MIR SINE MIR 109 186 -61 203 322 96 27 chr10 82166272 82166418 -63422870 - MIR3 SINE MIR -3 205 50 730 238 14 72 chr10 82166628 82166851 -63422437 + MER58C DNA MER1_type 2 211 -4 180 0 0 0 chr10 82166963 82166983 -63422305 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 2189 141 0 0 chr10 82167170 82167483 -63421805 - AluSq SINE Alu 0 313 1 2013 152 3 0 chr10 82167493 82167782 -63421506 - AluSx SINE Alu -22 290 1 1930 152 16 9 chr10 82167782 82168097 -63421191 - THE1C LTR MaLR -58 317 1 224 305 127 0 chr10 82168100 82168218 -63421070 - L2 LINE L2 -3 3269 3137 6060 115 8 2 chr10 82168522 82170239 -63419049 - L1PA13 LINE L1 -2 6161 4379 342 263 16 42 chr10 82172657 82172790 -63416498 + MIR SINE MIR 31 159 -68 306 289 0 44 chr10 82173081 82173195 -63416093 + MIR SINE MIR 153 261 -1 1691 116 0 13 chr10 82173417 82173649 -63415639 - AluSx SINE Alu -83 229 1 3333 255 77 54 chr10 82173953 82174047 -63415241 + L1MEc LINE L1 36 126 -6089 1846 136 60 100 chr10 82174047 82174497 -63414791 - MSTB1 LTR MaLR 0 432 1 3333 255 77 54 chr10 82174497 82175879 -63413409 + L1MEc LINE L1 126 1475 -4740 2204 117 0 0 chr10 82175879 82176170 -63413118 - AluY SINE Alu -20 291 1 3333 255 77 54 chr10 82176170 82176397 -63412891 + L1MEc LINE L1 1475 1695 -4520 774 48 10 0 chr10 82176397 82176500 -63412788 + L1MA1 LINE L1 6195 6298 -4 3333 255 77 54 chr10 82176500 82176693 -63412595 + L1MEc LINE L1 1695 3905 -2310 2057 114 3 10 chr10 82177048 82177345 -63411943 + AluSx SINE Alu 1 295 -17 421 272 140 43 chr10 82177445 82177680 -63411608 + MIR SINE MIR 5 262 0 2358 85 3 0 chr10 82178722 82179016 -63410272 + AluSx SINE Alu 1 295 -17 286 306 8 48 chr10 82181503 82181627 -63407661 - MIR3 SINE MIR -6 202 84 365 348 135 28 chr10 82181646 82182002 -63407286 + L3 LINE CR1 1059 1452 -125 2266 96 20 3 chr10 82182488 82182789 -63406499 - AluSg SINE Alu -4 306 1 227 324 41 41 chr10 82184202 82184278 -63405010 + MIR SINE MIR 104 182 -80 1774 155 53 28 chr10 82184278 82184633 -63404655 - THE1B LTR MaLR 0 364 1 227 324 41 41 chr10 82184633 82184701 -63404587 + MIR SINE MIR 181 248 -14 1596 175 13 23 chr10 82185923 82186232 -63403056 - AluJo SINE Alu -6 306 1 2272 116 0 0 chr10 82186236 82186539 -63402749 - AluSx SINE Alu -7 305 3 471 295 0 0 chr10 82188872 82188994 -63400294 - L2 LINE L2 0 3313 3192 229 284 83 92 chr10 82189341 82189450 -63399838 + MER91B DNA MER1_type 23 130 -60 410 287 70 25 chr10 82189664 82189821 -63399467 + MIR SINE MIR 34 197 -65 2435 182 44 73 chr10 82191062 82191146 -63398142 - MER119 DNA MER1_type -4 579 494 315 0 0 0 chr10 82191146 82191181 -63398107 + (CA)n Simple_repeat Simple_repeat 2 36 0 2435 182 44 73 chr10 82191181 82191286 -63398002 - MER119 DNA MER1_type -89 494 388 2096 130 3 0 chr10 82191286 82191579 -63397709 + AluSx SINE Alu 1 294 -18 2435 182 44 73 chr10 82191579 82191980 -63397308 - MER119 DNA MER1_type -195 388 5 420 292 0 42 chr10 82194374 82194542 -63394746 - MER5A DNA MER1_type -3 186 26 198 245 19 0 chr10 82195907 82195960 -63393328 - L2 LINE L2 -12 3260 3207 372 212 93 17 chr10 82197022 82197140 -63392148 + MER103 DNA DNA 26 152 -14 192 97 0 0 chr10 82199000 82199031 -63390257 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 531 330 78 52 chr10 82199102 82199548 -63389740 - L3 LINE CR1 -125 1452 995 960 220 5 10 chr10 82199648 82199848 -63389440 + MER20 DNA MER1_type 1 199 -20 2157 131 0 3 chr10 82199848 82200145 -63389143 + AluSx SINE Alu 1 296 -16 501 205 186 13 chr10 82200422 82200578 -63388710 - MER5A DNA MER1_type 0 189 7 200 194 0 0 chr10 82201294 82201330 -63387958 + (TG)n Simple_repeat Simple_repeat 1 36 0 509 289 48 18 chr10 82201542 82201708 -63387580 + MIR SINE MIR 18 188 -74 1917 151 0 7 chr10 82202184 82202475 -63386813 - AluJb SINE Alu -23 289 1 2381 103 3 0 chr10 82202916 82203228 -63386060 - AluSq SINE Alu 0 313 1 286 306 31 59 chr10 82203256 82203281 -63386007 - MIR SINE MIR -62 146 122 369 0 0 0 chr10 82203281 82203322 -63385966 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 1956 116 18 0 chr10 82203326 82203601 -63385687 - AluSq SINE Alu -31 282 3 286 306 31 59 chr10 82203601 82203721 -63385567 - MIR SINE MIR -89 119 28 829 265 171 41 chr10 82203992 82204478 -63384810 - MLT1H LTR MaLR 0 549 1 361 270 32 14 chr10 82205371 82205509 -63383779 + MIR3 SINE MIR 30 171 -37 725 124 0 47 chr10 82205523 82205652 -63383636 - AluJb SINE Alu -188 124 2 21 0 0 0 chr10 82205695 82205716 -63383572 + AT_rich Low_complexity Low_complexity 1 21 0 431 288 45 25 chr10 82205849 82206303 -63382985 + (TCCA)n Simple_repeat Simple_repeat 1 463 0 410 263 47 23 chr10 82206315 82206486 -63382802 + (TCCA)n Simple_repeat Simple_repeat 3 177 0 340 283 41 21 chr10 82206503 82206648 -63382640 + (TCCA)n Simple_repeat Simple_repeat 1 148 0 195 212 66 19 chr10 82206753 82206837 -63382451 - MIR SINE MIR -72 136 50 467 238 150 19 chr10 82208067 82208227 -63381061 + MER5A DNA MER1_type 9 189 0 579 343 138 28 chr10 82208386 82208783 -63380505 + L2 LINE L2 2832 3272 0 520 318 67 21 chr10 82209098 82209337 -63379951 - MIR SINE MIR -12 250 1 2215 113 0 0 chr10 82209893 82210185 -63379103 + AluSx SINE Alu 1 292 -20 927 241 64 19 chr10 82210667 82210932 -63378356 + MLT1E2 LTR MaLR 346 622 -4 2222 125 0 3 chr10 82211084 82211395 -63377893 + AluSq SINE Alu 2 311 -2 230 234 0 0 chr10 82212674 82212721 -63376567 + L2 LINE L2 3263 3309 -4 239 167 15 76 chr10 82212934 82213000 -63376288 + MIR3 SINE MIR 98 159 -49 279 0 0 0 chr10 82214448 82214479 -63374809 + (CA)n Simple_repeat Simple_repeat 2 32 0 323 295 0 0 chr10 82216440 82216518 -63372770 + MIR3 SINE MIR 125 202 -6 2737 29 6 0 chr10 82216542 82216855 -63372433 - AluYb8 SINE Alu -3 315 1 627 243 92 0 chr10 82217546 82217719 -63371569 - MER117 DNA MER1_type -2 195 7 874 293 91 27 chr10 82218167 82218283 -63371005 + L1ME3 LINE L1 5083 5190 -972 1795 179 3 10 chr10 82218283 82218590 -63370698 + AluJo SINE Alu 1 305 -7 874 293 91 27 chr10 82218590 82219159 -63370129 + L1ME3 LINE L1 5190 5826 -336 248 241 38 0 chr10 82219324 82219403 -63369885 + (TA)n Simple_repeat Simple_repeat 2 83 0 29146 31 2 2 chr10 82221268 82225489 -63363799 + L1PA3 LINE L1 1932 6153 -2 1436 217 38 12 chr10 82225672 82226013 -63363275 + MLT1A1 LTR MaLR 1 350 -15 1392 202 24 102 chr10 82226324 82226502 -63362786 - LTR37B LTR ERV1 -8 460 270 1953 158 3 0 chr10 82226502 82226800 -63362488 + AluJb SINE Alu 1 299 -13 1392 202 24 102 chr10 82226800 82227120 -63362168 - LTR37B LTR ERV1 -198 270 1 1119 150 75 90 chr10 82227279 82227336 -63361952 + MSTB1 LTR MaLR 1 57 -375 2063 107 0 32 chr10 82227336 82227644 -63361644 + AluSx SINE Alu 1 298 -14 1119 150 75 90 chr10 82227644 82227852 -63361436 + MSTB1 LTR MaLR 57 262 -170 1683 127 66 112 chr10 82227852 82227902 -63361386 - THE1C LTR MaLR 0 375 324 239 0 0 31 chr10 82227902 82227934 -63361354 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 1683 127 66 112 chr10 82227934 82227946 -63361342 - THE1C LTR MaLR -51 324 313 3388 44 0 0 chr10 82227946 82228330 -63360958 - L1PA5 LINE L1 -8 6146 5763 1683 127 66 112 chr10 82228330 82228512 -63360776 - THE1C LTR MaLR -62 313 124 2193 106 0 0 chr10 82228512 82228794 -63360494 + AluSq SINE Alu 1 282 -31 195 69 0 0 chr10 82228798 82228827 -63360461 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1683 127 66 112 chr10 82228827 82228968 -63360320 - THE1C LTR MaLR -254 121 1 1171 128 11 0 chr10 82228968 82229141 -63360147 + MSTB1 LTR MaLR 258 432 0 2248 88 28 0 chr10 82230237 82230522 -63358766 - AluSc SINE Alu -15 294 2 3447 175 63 23 chr10 82230550 82231246 -63358042 - LTR8A LTR ERV1 -2 725 2 1132 189 117 32 chr10 82231383 82231936 -63357352 - LTR48 LTR ERV1 -29 738 6 1586 153 150 0 chr10 82232031 82232344 -63356944 - MER50 LTR ERV1 -374 360 1 198 167 0 0 chr10 82233353 82233389 -63355899 + A-rich Low_complexity Low_complexity 1 36 0 629 223 103 58 chr10 82234483 82234707 -63354581 - LTR48 LTR ERV1 0 787 554 3254 179 17 20 chr10 82234749 82235385 -63353903 - LTR27 LTR ERV1 0 636 3 * 16040 121 21 3 chr10 82235385 82235917 -63353371 - Tigger1 DNA MER2_type -35 2383 1862 212 0 36 0 chr10 82235917 82235945 -63353343 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 16040 121 21 3 chr10 82235945 82237730 -63351558 - Tigger1 DNA MER2_type -556 1862 24 341 216 143 56 chr10 82237745 82237899 -63351389 - LTR48 LTR ERV1 -293 367 189 324 245 29 20 chr10 82237921 82238023 -63351265 - LTR48 LTR ERV1 -306 481 379 785 180 161 0 chr10 82238046 82238207 -63351081 - MER34C LTR ERV1 -352 233 47 363 252 48 10 chr10 82238265 82238368 -63350920 - MIR SINE MIR -119 143 37 3629 109 7 72 chr10 82238385 82238953 -63350335 + LTR26B LTR ERV1 1 531 0 1211 211 62 27 chr10 82238953 82239290 -63349998 - Charlie4a DNA MER1_type -51 457 109 767 183 0 15 chr10 82239290 82239427 -63349861 + FRAM SINE Alu 42 176 0 323 209 47 12 chr10 82239599 82239685 -63349603 - MIR SINE MIR -67 141 53 2305 112 3 0 chr10 82239997 82240302 -63348986 - AluSx SINE Alu -6 306 1 297 297 71 6 chr10 82240486 82240656 -63348632 - MIR SINE MIR -62 146 5 558 229 63 135 chr10 82241474 82242016 -63347272 - L1MC5 LINE L1 -199 7762 7260 567 118 5 215 chr10 82242056 82242242 -63347046 + L1MA9 LINE L1 6165 6311 -1 1050 114 42 8 chr10 82242250 82242388 -63346900 + L1PB1 LINE L1 5293 5425 -726 352 55 36 0 chr10 82242388 82242443 -63346845 + (CA)n Simple_repeat Simple_repeat 1 57 0 1050 114 42 8 chr10 82242443 82242574 -63346714 + L1PB1 LINE L1 5425 5923 -228 238 79 26 0 chr10 82242573 82242611 -63346677 + L1PB1 LINE L1 5444 5482 -669 * 250 101 72 0 chr10 82242618 82242687 -63346601 + (TA)n Simple_repeat Simple_repeat 2 75 0 2235 78 10 0 chr10 82242689 82242984 -63346304 + L1PB1 LINE L1 5492 5789 -362 180 0 0 0 chr10 82242984 82243004 -63346284 + (TAGA)n Simple_repeat Simple_repeat 3 22 0 249 152 0 0 chr10 82243007 82243053 -63346235 - LTR66 LTR ERVL -171 439 394 2799 78 3 5 chr10 82243070 82243440 -63345848 + L1PB1 LINE L1 5782 6150 -1 333 293 61 0 chr10 82243520 82243667 -63345621 - L1MC4 LINE L1 -786 7256 7101 551 283 53 16 chr10 82243983 82244170 -63345118 + MIR SINE MIR 69 262 0 2179 115 0 0 chr10 82244183 82244469 -63344819 - 7SLRNA srpRNA srpRNA -11 309 24 2157 189 23 54 chr10 82244476 82244958 -63344330 - MLT1C LTR MaLR 0 467 1 603 253 60 34 chr10 82245964 82246197 -63343091 + MLT1D LTR MaLR 3 241 -264 375 228 0 12 chr10 82246195 82246288 -63343000 + MLT1C LTR MaLR 385 467 0 * 357 292 132 18 chr10 82246288 82246455 -63342833 + MIR SINE MIR 62 246 -16 468 312 135 6 chr10 82247054 82247224 -63342064 + MIR3 SINE MIR 14 205 -3 426 315 56 7 chr10 82247748 82247920 -63341368 - MIR SINE MIR -61 147 3 307 290 175 40 chr10 82248134 82248334 -63340954 - MIR SINE MIR -2 260 34 710 253 76 87 chr10 82249740 82250084 -63339204 + MLT1H LTR MaLR 1 340 -209 1190 218 5 9 chr10 82250276 82250496 -63338792 + MER20 DNA MER1_type 1 219 0 2044 118 7 11 chr10 82251963 82252276 -63337012 - AluSq SINE Alu 0 312 1 2916 10 0 0 chr10 82253394 82253707 -63335581 - AluYb8 SINE Alu -5 313 1 229 319 69 69 chr10 82255206 82255366 -63333922 - L3 LINE CR1 -643 934 775 432 290 195 17 chr10 82255385 82255616 -63333672 - L3 LINE CR1 -932 645 374 367 104 15 15 chr10 82255631 82255698 -63333590 + (GA)n Simple_repeat Simple_repeat 2 68 0 855 149 0 0 chr10 82256437 82256591 -63332697 + (CTATA)n Simple_repeat Simple_repeat 4 157 0 278 320 34 34 chr10 82257031 82257209 -63332079 + L2 LINE L2 2716 2893 -421 3084 220 64 24 chr10 82258623 82259190 -63330098 + MER97a DNA MER1_type 1 894 0 1014 201 41 7 chr10 82259190 82259483 -63329805 + MER97a DNA MER1_type? 592 894 0 2506 94 0 0 chr10 82259487 82259796 -63329492 - AluSq SINE Alu -4 309 1 641 250 45 85 chr10 82259878 82260359 -63328929 - MLT1H LTR MaLR -2 547 2 5702 128 4 8 chr10 82260482 82261463 -63327825 - L1MA5A LINE L1 -2 6295 5319 3402 186 14 34 chr10 82261466 82262961 -63326327 - L1 LINE L1 -3235 3613 2147 552 194 29 0 chr10 82262962 82263065 -63326223 - U6 snRNA snRNA 0 107 2 440 316 119 31 chr10 82263083 82263218 -63326070 - MLT1K LTR MaLR -232 356 234 2510 63 0 25 chr10 82263218 82263537 -63325751 - AluY SINE Alu 0 311 1 440 316 119 31 chr10 82263537 82263721 -63325567 - MLT1K LTR MaLR -354 234 9 1150 228 47 28 chr10 82264139 82264393 -63324895 + AluJo SINE Alu 24 282 -30 275 303 144 23 chr10 82264593 82264725 -63324563 + MIR3 SINE MIR 22 169 -39 316 280 97 0 chr10 82265745 82265838 -63323450 + L2 LINE L2 3146 3247 -25 2142 135 0 25 chr10 82266282 82266600 -63322688 + AluSx SINE Alu 1 310 -2 821 284 51 4 chr10 82268114 82268350 -63320938 + MIR SINE MIR 6 252 -10 479 301 142 9 chr10 82268596 82268822 -63320466 - MIR SINE MIR -5 257 2 301 244 0 0 chr10 82269354 82269440 -63319848 - L1MB8 LINE L1 0 6178 6093 1522 173 59 19 chr10 82269457 82269828 -63319460 - L1MB4 LINE L1 -6 6174 5789 347 230 105 39 chr10 82270291 82270318 -63318970 + MIR3 SINE MIR 3 27 -181 192 40 0 0 chr10 82270318 82270343 -63318945 + (CCCTAA)n Simple_repeat Simple_repeat 4 28 0 347 230 105 39 chr10 82270343 82270467 -63318821 + MIR3 SINE MIR 27 166 -42 554 288 94 0 chr10 82271833 82272024 -63317264 - MIR SINE MIR 0 262 54 899 309 66 36 chr10 82272184 82272653 -63316635 - L2 LINE L2 -16 3297 2815 1913 164 0 0 chr10 82273279 82273565 -63315723 + AluJb SINE Alu 11 296 -16 1984 121 69 39 chr10 82274806 82275170 -63314118 - THE1C LTR MaLR 0 375 1 1316 256 112 21 chr10 82276916 82277587 -63311701 - HAL1b LINE L1 -425 923 192 24 32 0 0 chr10 82277639 82277670 -63311618 + AT_rich Low_complexity Low_complexity 1 31 0 572 241 81 26 chr10 82277788 82278150 -63311138 - L1ME LINE L1 -4808 1272 894 396 0 0 0 chr10 82278150 82278194 -63311094 + (TCTA)n Simple_repeat Simple_repeat 2 45 0 350 138 25 0 chr10 82278194 82278274 -63311014 + CT-rich Low_complexity Low_complexity 4 85 0 1595 193 13 16 chr10 82278277 82278583 -63310705 - AluJo SINE Alu -7 305 1 472 298 69 13 chr10 82278586 82279009 -63310279 - L1ME LINE L1 -5169 901 465 357 284 14 50 chr10 82279116 82279257 -63310031 - L1ME LINE L1 -5616 454 319 322 323 83 32 chr10 82279350 82279567 -63309721 - L1ME LINE L1 -5835 235 8 615 191 284 0 chr10 82281314 82281508 -63307780 + MIR SINE MIR 13 261 -1 2009 69 0 4 chr10 82281676 82281921 -63307367 - AluSq SINE Alu -5 308 65 651 276 122 0 chr10 82281923 82282104 -63307184 - MIR SINE MIR -19 243 41 193 275 87 43 chr10 82282961 82283030 -63306258 - L2 LINE L2 -44 3269 3198 402 296 67 7 chr10 82283097 82283232 -63306056 - L3 LINE CR1 -3 1574 1432 618 267 60 24 chr10 82285715 82285966 -63303322 - MIR SINE MIR -1 261 2 719 178 0 31 chr10 82285967 82286096 -63303192 - FLAM_A SINE Alu -10 132 8 1846 214 112 7 chr10 82286250 82286704 -63302584 + MLT1D LTR MaLR 1 502 -3 2621 105 6 3 chr10 82286797 82287160 -63302128 + THE1B LTR MaLR 1 364 0 465 301 55 0 chr10 82287170 82287316 -63301972 + L2 LINE L2 3159 3312 -1 23 0 0 0 chr10 82287564 82287587 -63301701 + AT_rich Low_complexity Low_complexity 1 23 0 431 239 43 43 chr10 82288433 82288571 -63300717 + MIR3 SINE MIR 15 152 -56 28 61 0 0 chr10 82289677 82289726 -63299562 + AT_rich Low_complexity Low_complexity 1 49 0 438 206 71 0 chr10 82290142 82290283 -63299005 - LTR54B LTR ERV1 -2 496 346 2111 93 26 6 chr10 82290283 82290596 -63298692 + L1P4 LINE L1 5494 5812 -353 768 142 7 0 chr10 82290575 82290716 -63298572 + L1P LINE L1 5050 5191 -955 * 696 55 0 0 chr10 82290716 82290807 -63298481 - LTR54B LTR ERV1 -407 91 1 196 400 9 0 chr10 82291707 82291817 -63297471 + L3 LINE CR1 1432 1542 -35 2177 125 3 13 chr10 82292545 82292858 -63296430 - AluSx SINE Alu 0 312 3 336 127 0 0 chr10 82294038 82294093 -63295195 + (CA)n Simple_repeat Simple_repeat 2 56 0 286 356 11 42 chr10 82294377 82294570 -63294718 - MIR3 SINE MIR -67 141 4 1710 171 0 39 chr10 82295114 82295419 -63293869 - AluSx SINE Alu -19 293 1 195 296 155 0 chr10 82295428 82295499 -63293789 + MIR SINE MIR 69 150 -58 937 348 112 25 chr10 82296644 82297491 -63291797 + L3 LINE CR1 618 1538 -39 278 315 27 27 chr10 82299079 82299190 -63290098 - MIR3 SINE MIR -84 124 14 191 377 91 0 chr10 82300744 82300821 -63288467 - L2 LINE L2 -210 3062 2979 279 0 0 0 chr10 82301295 82301326 -63287962 + (TG)n Simple_repeat Simple_repeat 1 31 0 24 0 0 0 chr10 82303246 82303270 -63286018 + AT_rich Low_complexity Low_complexity 1 24 0 200 304 0 0 chr10 82307513 82307559 -63281729 + polypyrimidine Low_complexity Low_complexity 1 46 0 433 303 88 23 chr10 82309636 82310068 -63279220 + MLT1K LTR MaLR 77 572 -16 770 275 8 65 chr10 82315178 82315440 -63273848 + MIR SINE MIR 2 248 -14 211 239 45 15 chr10 82315488 82315555 -63273733 - MIR SINE MIR -106 156 88 1782 230 95 66 chr10 82315762 82316364 -63272924 + MER63D DNA MER1_type 2 648 -413 751 201 0 8 chr10 82316364 82316498 -63272790 - FLAM_C SINE Alu 0 133 1 1782 230 95 66 chr10 82316498 82316925 -63272363 + MER63D DNA MER1_type 648 1061 0 406 290 26 26 chr10 82317166 82317321 -63271967 + MIR SINE MIR 6 160 -102 3862 173 94 12 chr10 82317322 82318734 -63270554 + MER52A LTR ERV1 1 1755 0 187 345 0 0 chr10 82318734 82318789 -63270499 + MIR SINE MIR 158 212 -50 347 315 20 20 chr10 82319245 82319394 -63269894 + MIR SINE MIR 20 168 -94 2069 143 0 0 chr10 82319710 82319997 -63269291 - AluSx SINE Alu -25 287 1 222 222 0 0 chr10 82320269 82320314 -63268974 + MIR3 SINE MIR 155 199 -9 273 268 0 14 chr10 82320356 82320427 -63268861 + CT-rich Low_complexity Low_complexity 1 70 0 2346 90 0 0 chr10 82321033 82321332 -63267956 - AluY SINE Alu -12 299 1 292 237 0 0 chr10 82321708 82321767 -63267521 + L2 LINE L2 3255 3313 0 734 314 54 26 chr10 82323058 82323676 -63265612 - L1ME3 LINE L1 -328 5834 5284 2052 130 0 0 chr10 82323787 82324071 -63265217 + AluSx SINE Alu 1 284 -28 2386 94 0 3 chr10 82329217 82329516 -63259772 - AluSg SINE Alu -12 298 1 323 340 177 9 chr10 82329542 82329774 -63259514 + L2 LINE L2 2997 3267 -5 206 265 36 36 chr10 82330500 82330583 -63258705 - MIR SINE MIR -61 201 119 21 36 0 0 chr10 82331969 82331997 -63257291 + AT_rich Low_complexity Low_complexity 1 28 0 1873 177 139 16 chr10 82332273 82332866 -63256422 - MER39 LTR ERV1 0 707 6 2155 133 0 0 chr10 82333114 82333422 -63255866 + AluSx SINE Alu 1 308 -4 187 365 91 29 chr10 82336917 82337158 -63252130 - L2 LINE L2 -2 3270 3015 4082 92 10 26 chr10 82337563 82338183 -63251105 - MER4B LTR ERV1 0 610 1 1470 267 83 15 chr10 82339281 82339780 -63249508 - L2 LINE L2 0 3313 2773 1836 167 97 3 chr10 82339780 82340121 -63249167 - MER93b LTR ERV1 0 373 1 1470 267 83 15 chr10 82340121 82340158 -63249130 - L2 LINE L2 -540 2773 2740 625 267 40 0 chr10 82340338 82340533 -63248755 + FAM SINE Alu 1 66 0 403 313 87 50 chr10 82340771 82341173 -63248115 + L1M4 LINE L1 2141 2557 -3589 452 282 72 88 chr10 82342117 82342365 -63246923 + L1M4 LINE L1 3682 3920 -2226 1995 164 0 0 chr10 82342365 82342669 -63246619 + AluSx SINE Alu 1 304 -8 452 282 72 88 chr10 82342669 82342895 -63246393 + L1M4 LINE L1 3920 4148 -1998 439 232 0 0 chr10 82342973 82343068 -63246220 - MER58B DNA MER1_type 0 341 247 643 299 108 40 chr10 82343140 82343638 -63245650 + L1M4 LINE L1 2182 2713 -3433 1094 247 126 70 chr10 82343642 82344196 -63245092 - MLT1G1 LTR MaLR 0 595 11 978 319 89 35 chr10 82344415 82345063 -63244225 + L1M4 LINE L1 2895 3577 -2569 705 265 9 43 chr10 82345066 82345277 -63244011 + MER63A DNA MER1_type 4 207 -3 227 303 66 22 chr10 82345437 82345711 -63243577 + L1M4 LINE L1 3670 3955 -2191 250 308 45 8 chr10 82345781 82345914 -63243374 + L1M4 LINE L1 4048 4185 -1961 2203 127 0 13 chr10 82345945 82346253 -63243035 - AluSx SINE Alu -8 304 1 764 330 61 49 chr10 82346271 82347043 -63242245 + L1M4 LINE L1 4246 5026 -1120 521 180 8 119 chr10 82348180 82348424 -63240864 - AluSg/x SINE Alu -10 302 86 2041 148 7 0 chr10 82349492 82349795 -63239493 - AluSx SINE Alu -7 305 1 251 316 92 0 chr10 82350087 82350163 -63239125 + MIR SINE MIR 112 194 -68 2310 92 23 0 chr10 82350486 82350790 -63238498 + AluSp SINE Alu 1 311 -2 237 227 80 27 chr10 82351163 82351238 -63238050 - MIR3 SINE MIR -16 192 114 200 268 0 18 chr10 82355281 82355337 -63233951 + L2 LINE L2 3218 3272 0 219 356 80 49 chr10 82355575 82355738 -63233550 + L2 LINE L2 3097 3264 -8 1385 149 56 0 chr10 82355818 82356086 -63233202 + L1MA4 LINE L1 6007 6289 -11 288 0 0 0 chr10 82357411 82357443 -63231845 + (CA)n Simple_repeat Simple_repeat 1 32 0 207 316 0 0 chr10 82358022 82358079 -63231209 + (CAA)n Simple_repeat Simple_repeat 3 59 0 2811 167 35 19 chr10 82358085 82358624 -63230664 + MER44D DNA MER2_type 1 603 -2 812 227 123 9 chr10 82358625 82358845 -63230443 - MIR SINE MIR -17 245 1 238 315 34 11 chr10 82358961 82359050 -63230238 + MIR SINE MIR 81 171 -91 182 218 55 0 chr10 82359091 82359146 -63230142 + MIR SINE MIR 169 226 -36 21 0 0 0 chr10 82360583 82360604 -63228684 + AT_rich Low_complexity Low_complexity 1 21 0 347 330 43 22 chr10 82360824 82361148 -63228140 - L1ME LINE L1 -417 5745 5415 211 283 9 18 chr10 82361259 82361372 -63227916 + (TA)n Simple_repeat Simple_repeat 1 112 0 963 229 33 0 chr10 82361373 82361587 -63227701 + MER58A DNA MER1_type 1 221 -3 240 286 116 41 chr10 82361915 82362062 -63227226 + L2 LINE L2 3121 3278 -35 226 362 50 28 chr10 82362265 82362406 -63226882 + MER5B DNA MER1_type 33 176 -2 554 273 36 44 chr10 82363900 82364149 -63225139 + MIR SINE MIR 2 248 -14 265 289 52 28 chr10 82364774 82364985 -63224303 - L1MC/D LINE L1 -1928 5880 5665 248 267 0 0 chr10 82365194 82365269 -63224019 - L1MC4a LINE L1 -1862 5946 5872 244 161 18 0 chr10 82365270 82365326 -63223962 + (TA)n Simple_repeat Simple_repeat 2 58 0 2714 10 0 19 chr10 82365402 82365713 -63223575 + AluY SINE Alu 1 305 -6 358 238 0 25 chr10 82366063 82366143 -63223145 + MIR SINE MIR 79 156 -106 541 222 86 0 chr10 82366275 82366437 -63222851 - L1PA16 LINE L1 0 6166 5991 280 303 0 20 chr10 82366467 82366566 -63222722 + MIR SINE MIR 156 252 -10 980 152 11 0 chr10 82366839 82367017 -63222271 + GA-rich Low_complexity Low_complexity 1 180 0 623 219 28 0 chr10 82367047 82367225 -63222063 + L1M4 LINE L1 4146 4328 -1818 238 246 43 29 chr10 82367252 82367321 -63221967 - L2 LINE L2 -419 2894 2825 234 306 14 0 chr10 82367344 82367416 -63221872 + CT-rich Low_complexity Low_complexity 4 76 0 357 281 27 63 chr10 82367593 82367756 -63221532 + MIR3 SINE MIR 21 177 -40 213 339 37 64 chr10 82367884 82367993 -63221295 - L2 LINE L2 -156 3116 3011 14486 215 8 10 chr10 82368452 82371113 -63218175 - L1PB3 LINE L1 -22 6132 3468 180 0 0 0 chr10 82371113 82371133 -63218155 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2119 78 3 84 chr10 82371137 82371470 -63217818 - AluSp SINE Alu -7 306 1 14486 215 8 10 chr10 82371470 82373433 -63215855 - L1PB3 LINE L1 -2689 3465 1550 1242 118 101 17 chr10 82374244 82374482 -63214806 + MER44D DNA MER2_type 3 530 -79 414 222 25 0 chr10 82374590 82374671 -63214617 + MER44D DNA MER2_type 527 609 0 2055 120 0 3 chr10 82376054 82376373 -63212915 + AluSx SINE Alu 2 319 0 232 308 34 14 chr10 82376685 82376831 -63212457 - MER103 DNA DNA -10 156 8 22 56 0 0 chr10 82377096 82377132 -63212156 + AT_rich Low_complexity Low_complexity 1 36 0 359 192 26 0 chr10 82377562 82377640 -63211648 - MER81 DNA DNA 0 114 35 1984 176 22 0 chr10 82379726 82380089 -63209199 - L1PB4 LINE L1 -4 6152 5782 202 122 20 20 chr10 82380117 82380166 -63209122 + (CATA)n Simple_repeat Simple_repeat 2 50 0 11437 177 23 20 chr10 82380167 82380596 -63208692 - L1PB4 LINE L1 -376 5780 5354 2501 87 0 0 chr10 82380596 82380907 -63208381 - AluY SINE Alu 0 311 1 11437 177 23 20 chr10 82380907 82382567 -63206721 - L1PB4 LINE L1 -802 5354 3701 2313 112 0 0 chr10 82382567 82382879 -63206409 - AluSx SINE Alu 0 312 1 369 0 0 0 chr10 82382884 82382925 -63206363 + (TG)n Simple_repeat Simple_repeat 2 42 0 11437 177 23 20 chr10 82382925 82384003 -63205285 - L1PB4 LINE L1 -2458 3698 2576 2324 87 0 0 chr10 82384110 82384396 -63204892 + AluY SINE Alu 1 286 -25 23 0 0 0 chr10 82384766 82384789 -63204499 + AT_rich Low_complexity Low_complexity 1 23 0 258 254 0 0 chr10 82386064 82386123 -63203165 + (CA)n Simple_repeat Simple_repeat 2 60 0 432 325 35 54 chr10 82387229 82387311 -63201977 + L2 LINE L2 2842 2924 -389 2908 13 0 0 chr10 82387311 82387629 -63201659 - AluYb8 SINE Alu 0 318 1 432 325 35 54 chr10 82387629 82387860 -63201428 + L2 LINE L2 2924 3149 -164 242 164 18 0 chr10 82387867 82387922 -63201366 + CT-rich Low_complexity Low_complexity 1 56 0 201 254 14 56 chr10 82387935 82388006 -63201282 + L2 LINE L2 3185 3252 -61 207 208 151 0 chr10 82388184 82388237 -63201051 - L2 LINE L2 0 3313 3253 277 127 266 51 chr10 82389748 82389827 -63199461 + L2 LINE L2 3212 3307 -6 29 0 0 0 chr10 82390693 82390722 -63198566 + AT_rich Low_complexity Low_complexity 1 29 0 591 274 136 71 chr10 82390722 82391222 -63198066 + L1ME4a LINE L1 5258 5781 -340 1809 167 3 7 chr10 82391222 82391515 -63197773 + AluJo SINE Alu 4 295 -17 591 274 136 71 chr10 82391515 82391571 -63197717 + L1ME4a LINE L1 5781 5832 -289 396 63 16 0 chr10 82391589 82391652 -63197636 - MER41B LTR ERV1 -88 547 484 1091 268 91 17 chr10 82392124 82392640 -63196648 - MLT1G LTR MaLR -2 588 34 887 230 56 14 chr10 82392648 82392861 -63196427 - MIR SINE MIR -26 236 15 230 256 26 64 chr10 82392941 82393019 -63196269 - L2 LINE L2 -221 3051 2977 3877 161 40 45 chr10 82393355 82394201 -63195087 - L1MB3 LINE L1 -2 6181 5340 269 312 96 13 chr10 82394202 82394359 -63194929 - L2 LINE L2 -596 2718 2549 4860 147 33 13 chr10 82396222 82396319 -63192969 - L1MA8 LINE L1 -4 6287 6193 1304 178 22 0 chr10 82396319 82396550 -63192738 - MER46A DNA MER2_type 0 236 1 4860 147 33 13 chr10 82396550 82397924 -63191364 - L1MA8 LINE L1 -98 6193 4789 23 0 0 0 chr10 82398050 82398073 -63191215 + AT_rich Low_complexity Low_complexity 1 23 0 203 88 29 0 chr10 82399830 82399864 -63189424 + (TTTTA)n Simple_repeat Simple_repeat 2 36 0 187 80 0 0 chr10 82403008 82403033 -63186255 + MIR SINE MIR 120 144 -64 374 344 110 40 chr10 82403390 82403716 -63185572 + L2 LINE L2 2188 2536 -778 2333 219 82 11 chr10 82403815 82404363 -63184925 + MLT1E LTR MaLR 1 587 -6 213 355 139 29 chr10 82404442 82404687 -63184601 + L2 LINE L2 2829 3100 -172 1147 180 30 17 chr10 82404756 82404989 -63184299 - MER46A DNA MER2_type 0 236 1 498 275 0 34 chr10 82405285 82405434 -63183854 + MER45C DNA AcHobo 42 185 -768 280 214 29 29 chr10 82405489 82405559 -63183729 + MER45C DNA AcHobo 325 394 -559 587 206 159 82 chr10 82405562 82405795 -63183493 + MER45C DNA AcHobo 703 953 0 489 322 35 52 chr10 82405857 82406202 -63183086 - L2 LINE L2 -124 3189 2851 1678 193 3 6 chr10 82406242 82406553 -63182735 - AluJo SINE Alu -2 310 1 222 37 0 0 chr10 82408262 82408289 -63180999 + (TAAAA)n Simple_repeat Simple_repeat 3 29 0 556 289 76 7 chr10 82408335 82408628 -63180660 + L2 LINE L2 2758 3069 -244 2011 169 41 14 chr10 82408655 82409068 -63180220 + MLT1D LTR MaLR 82 505 0 189 277 21 0 chr10 82411351 82411398 -63177890 - L3 LINE CR1 -36 1541 1494 397 288 14 55 chr10 82411451 82411597 -63177691 - MIR SINE MIR -66 196 57 230 235 29 29 chr10 82412820 82412888 -63176400 + L2 LINE L2 3246 3313 0 875 102 86 0 chr10 82413187 82413315 -63175973 - MER85 DNA T2_type 0 139 1 238 266 173 0 chr10 82413355 82413494 -63175794 - L1ME4a LINE L1 -27 6094 5932 412 327 97 77 chr10 82413677 82414108 -63175180 - L2 LINE L2 -16 3256 2817 1952 171 0 3 chr10 82414198 82414502 -63174786 - AluJb SINE Alu -2 310 8 1654 168 7 27 chr10 82415519 82415816 -63173472 - AluJb SINE Alu -16 296 6 206 200 38 38 chr10 82416237 82416342 -63172946 + (CGGG)n Simple_repeat Simple_repeat 3 107 0 834 181 0 8 chr10 82416777 82416910 -63172378 + FLAM_A SINE Alu 1 132 -1 294 302 23 23 chr10 82417483 82417655 -63171633 + GA-rich Low_complexity Low_complexity 5 176 0 2110 114 0 7 chr10 82417927 82418226 -63171062 + AluJb SINE Alu 1 297 -15 211 356 83 0 chr10 82419300 82419432 -63169856 + L2 LINE L2 3125 3267 -5 214 205 0 0 chr10 82420183 82420222 -63169066 - L3b LINE CR1 -438 1145 1107 2048 53 8 8 chr10 82420561 82420824 -63168464 + AluY SINE Alu 1 263 -48 1894 128 14 7 chr10 82423679 82423976 -63165312 - AluJb SINE Alu -13 299 1 313 301 64 64 chr10 82424376 82424501 -63164787 + L1M4 LINE L1 4874 5001 -1145 927 150 0 18 chr10 82424501 82424668 -63164620 + L1MA4 LINE L1 6137 6300 0 313 301 64 64 chr10 82424668 82424745 -63164543 + L1M4 LINE L1 5000 5076 -1070 24 0 0 0 chr10 82425987 82426011 -63163277 + AT_rich Low_complexity Low_complexity 1 24 0 473 73 0 0 chr10 82426778 82426833 -63162455 + AluSg/x SINE Alu 149 203 -109 581 167 8 42 chr10 82426834 82426954 -63162334 - L1MA4A LINE L1 -193 6110 5995 342 307 32 98 chr10 82426975 82427252 -63162036 - L1MEc LINE L1 -4993 1391 1133 1004 158 0 18 chr10 82427253 82427417 -63161871 - AluJb SINE Alu -13 299 139 1373 191 6 75 chr10 82427417 82427737 -63161551 - AluJb SINE Alu -14 298 1 232 214 116 18 chr10 82427737 82427849 -63161439 - L1MEc LINE L1 -5280 1283 1161 235 190 103 0 chr10 82428072 82428130 -63161158 + MER5C DNA MER1_type 261 324 0 1849 68 17 0 chr10 82428416 82428651 -63160637 + AluY SINE Alu 29 267 -44 1971 119 39 0 chr10 82428858 82429144 -63160144 + AluSx SINE Alu 1 297 -15 2216 138 36 30 chr10 82431466 82431828 -63157460 - THE1B LTR MaLR 0 364 1 22 56 0 0 chr10 82431845 82431881 -63157407 + AT_rich Low_complexity Low_complexity 1 36 0 402 254 36 9 chr10 82431905 82432015 -63157273 + L2 LINE L2 3160 3272 0 518 305 49 20 chr10 82432022 82432268 -63157020 - MIR SINE MIR -7 255 3 355 221 0 13 chr10 82432282 82432359 -63156929 + MIR SINE MIR 65 140 -122 393 316 86 26 chr10 82433611 82433763 -63155525 + MIR3 SINE MIR 33 193 -15 264 59 0 0 chr10 82433781 82433815 -63155473 + (TG)n Simple_repeat Simple_repeat 2 35 0 238 317 106 0 chr10 82434547 82434651 -63154637 + MIR SINE MIR 48 162 -100 588 239 81 58 chr10 82435565 82435824 -63153464 - L1ME3A LINE L1 -5 6099 5835 4135 242 90 97 chr10 82435877 82437094 -63152194 - L1ME3A LINE L1 -997 5083 3859 4691 161 35 2 chr10 82437094 82437882 -63151406 - L1MC1 LINE L1 0 6333 5520 4135 242 90 97 chr10 82437882 82439694 -63149594 - L1ME3A LINE L1 -2221 3859 2074 314 294 107 75 chr10 82439755 82440129 -63149159 - L1ME3A LINE L1 -5135 935 550 1845 163 3 0 chr10 82441296 82441607 -63147681 + AluJo SINE Alu 1 312 0 357 304 14 22 chr10 82441607 82441745 -63147543 + MIR SINE MIR 69 205 -57 31 26 0 0 chr10 82441788 82441826 -63147462 + AT_rich Low_complexity Low_complexity 1 38 0 180 262 309 0 chr10 82442037 82442121 -63147167 - MIR SINE MIR -72 136 27 1843 89 0 39 chr10 82442488 82442746 -63146542 + AluY SINE Alu 58 305 -6 377 327 91 10 chr10 82442765 82442964 -63146324 - MIR SINE MIR 0 262 48 183 80 0 0 chr10 82443528 82443553 -63145735 + (T)n Simple_repeat Simple_repeat 1 25 0 538 263 80 0 chr10 82443565 82443702 -63145586 + MIR SINE MIR 36 183 -79 38 22 0 0 chr10 82443748 82443793 -63145495 + AT_rich Low_complexity Low_complexity 1 45 0 15119 35 1 2 chr10 82443793 82446281 -63143007 - L1PA5 LINE L1 -7 6147 3661 282 29 0 0 chr10 82447207 82447242 -63142046 + (CA)n Simple_repeat Simple_repeat 2 36 0 565 269 36 18 chr10 82449589 82449756 -63139532 + MIR SINE MIR 11 180 -82 2195 137 82 18 chr10 82449905 82450247 -63139041 + THE1B LTR MaLR 1 364 0 206 152 0 0 chr10 82450863 82450896 -63138392 - MIR3 SINE MIR -48 160 128 254 253 10 0 chr10 82452477 82452576 -63136712 + CT-rich Low_complexity Low_complexity 1 100 0 210 286 0 0 chr10 82452710 82452759 -63136529 + (CCCA)n Simple_repeat Simple_repeat 4 52 0 333 118 0 0 chr10 82452772 82452823 -63136465 + (TCCA)n Simple_repeat Simple_repeat 1 51 0 245 356 111 0 chr10 82452832 82452922 -63136366 - L2 LINE L2 -23 3249 3150 246 204 74 0 chr10 82453107 82453161 -63136127 - L2 LINE L2 -41 3231 3174 462 278 14 14 chr10 82453329 82453473 -63135815 - MIR3 SINE MIR -7 201 58 21 0 0 0 chr10 82455290 82455311 -63133977 + AT_rich Low_complexity Low_complexity 1 21 0 260 331 187 7 chr10 82455465 82455604 -63133684 - MIR3 SINE MIR -9 199 36 550 236 68 6 chr10 82456023 82456184 -63133104 - MIR SINE MIR -24 238 68 440 257 49 28 chr10 82458658 82458802 -63130486 + MIR3 SINE MIR 49 195 -13 182 37 37 0 chr10 82459353 82459380 -63129908 + (TC)n Simple_repeat Simple_repeat 2 29 0 625 236 7 0 chr10 82459546 82459686 -63129602 + MIR SINE MIR 71 211 -51 195 276 35 0 chr10 82460533 82460591 -63128697 + MIR3 SINE MIR 104 163 -45 1538 175 21 14 chr10 82460592 82460877 -63128411 + AluJb SINE Alu 1 287 -25 195 352 176 9 chr10 82461190 82461298 -63127990 - MIR SINE MIR -63 145 20 368 189 12 47 chr10 82462982 82463151 -63126137 + (TATATG)n Simple_repeat Simple_repeat 4 166 0 302 289 24 0 chr10 82463089 82463172 -63126116 - L1MC4 LINE L1 -1343 6699 6615 * 181 340 43 32 chr10 82463191 82463285 -63126003 - L2 LINE L2 -18 3254 3160 22 35 0 0 chr10 82464109 82464138 -63125150 + AT_rich Low_complexity Low_complexity 1 29 0 399 314 72 5 chr10 82464333 82464527 -63124761 - L1ME2 LINE L1 -270 5894 5688 617 154 114 8 chr10 82464528 82464651 -63124637 - MER2 DNA MER2_type -1 344 209 594 304 69 64 chr10 82465080 82465658 -63123630 - L1MEd LINE L1 -4881 1238 658 278 266 0 0 chr10 82466444 82466523 -63122765 - L1ME LINE L1 -267 5854 5776 288 280 136 14 chr10 82466525 82466739 -63122549 - L1ME LINE L1 -433 5688 5449 350 321 44 41 chr10 82468235 82468574 -63120714 - HAL1b LINE L1 -679 669 330 2366 70 0 13 chr10 82469389 82469687 -63119601 - AluY SINE Alu -17 294 1 2121 105 3 35 chr10 82469825 82470139 -63119149 - AluSp SINE Alu -9 304 1 264 333 15 59 chr10 82471101 82471236 -63118052 + L2 LINE L2 3183 3311 -2 222 402 29 0 chr10 82472154 82472256 -63117032 - MIR3 SINE MIR -95 113 9 267 246 0 0 chr10 82473192 82473249 -63116039 - L3 LINE CR1 -6 1571 1515 22 0 0 0 chr10 82474831 82474853 -63114435 + AT_rich Low_complexity Low_complexity 1 22 0 3219 211 16 6 chr10 82475433 82476079 -63113209 - MER82 DNA MER2_type -1 652 1 418 30 134 0 chr10 82477960 82478027 -63111261 - L1PA4 LINE L1 -3 6152 6077 284 286 0 13 chr10 82478336 82478413 -63110875 + MER5B DNA MER1_type 1 76 -102 627 272 83 0 chr10 82478418 82478587 -63110701 - MER5A DNA MER1_type 0 189 7 315 360 64 25 chr10 82479073 82479276 -63110012 + MIR SINE MIR 20 230 -32 1439 190 56 3 chr10 82479975 82480259 -63109029 + AluJb SINE Alu 1 299 -13 204 247 216 21 chr10 82480342 82480439 -63108849 + MER5A DNA MER1_type 68 183 -6 440 302 21 57 chr10 82481908 82482100 -63107188 + L2 LINE L2 3109 3293 -20 2031 113 7 7 chr10 82482100 82482400 -63106888 - AluSx SINE Alu -11 301 2 255 273 79 42 chr10 82482407 82482572 -63106716 - L2 LINE L2 -254 3018 2848 701 221 102 31 chr10 82483799 82483841 -63105447 - LTR50 LTR ERVL -43 752 714 2028 129 19 71 chr10 82483841 82484251 -63105037 - MLT1B LTR MaLR -1 389 1 701 221 102 31 chr10 82484251 82484462 -63104826 - LTR50 LTR ERVL -81 714 481 501 250 97 42 chr10 82484480 82484696 -63104592 - LTR50 LTR ERVL -567 228 1 1991 152 13 0 chr10 82484696 82484999 -63104289 + AluJo SINE Alu 1 307 -5 709 277 62 17 chr10 82485044 82485333 -63103955 - L1ME4a LINE L1 -223 5898 5597 236 170 19 0 chr10 82487052 82487105 -63102183 + GA-rich Low_complexity Low_complexity 1 54 0 3820 216 94 22 chr10 82487106 82488012 -63101276 + L1M4b LINE L1 5 975 -5884 632 187 22 8 chr10 82488015 82488149 -63101139 - L1MB4 LINE L1 -58 6122 5987 987 265 33 39 chr10 82488173 82488535 -63100753 + L1M4b LINE L1 2111 2524 -4433 2529 163 23 58 chr10 82488535 82489136 -63100152 + L1MB4 LINE L1 5600 6179 -1 987 265 33 39 chr10 82489136 82489253 -63100035 + L1M4b LINE L1 2524 2640 -4317 7509 228 74 26 chr10 82489267 82493540 -63095748 + L1MB8 LINE L1 2476 6984 -5 23545 40 6 1 chr10 82493554 82497235 -63092053 + L1PA5 LINE L1 2461 6146 -8 195 422 35 0 chr10 82497308 82497424 -63091864 + MIR SINE MIR 16 135 -73 592 216 163 0 chr10 82497531 82497684 -63091604 + MER45A DNA AcHobo 1 178 0 296 245 39 21 chr10 82497684 82497780 -63091508 + MER20B DNA MER1_type 92 193 -26 443 250 27 0 chr10 82498187 82498299 -63090989 - MIR SINE MIR -48 214 100 379 327 6 63 chr10 82498600 82498759 -63090529 - MIR3 SINE MIR -9 199 50 253 336 47 72 chr10 82499982 82500384 -63088904 + L2 LINE L2 2128 2519 -795 2264 245 73 57 chr10 82500386 82501462 -63087826 - L1ME3A LINE L1 -6 6400 5293 2266 224 16 0 chr10 82501462 82501913 -63087375 - MER74C LTR ERVL 0 460 3 2264 245 73 57 chr10 82501913 82502075 -63087213 - L1ME3A LINE L1 -1113 5293 5135 383 225 19 19 chr10 82502284 82502444 -63086844 + CT-rich Low_complexity Low_complexity 5 164 0 1117 218 115 27 chr10 82502445 82502967 -63086321 - L1ME3A LINE L1 -1430 4952 4385 * 2192 248 85 12 chr10 82502948 82503984 -63085304 - L1MDa LINE L1 -3623 2917 1758 345 297 28 97 chr10 82504026 82504316 -63084972 - L1MDa LINE L1 -6252 288 19 482 225 40 45 chr10 82505883 82506049 -63083239 - MIR SINE MIR -6 256 6 247 173 19 19 chr10 82506071 82506123 -63083165 + MIR SINE MIR 102 153 -109 312 255 41 0 chr10 82506377 82506475 -63082813 - L1MA10 LINE L1 -9 6325 6224 * 621 225 92 55 chr10 82506467 82506506 -63082782 - L1MD3 LINE L1 -1948 6047 6009 1144 220 183 26 chr10 82506506 82506975 -63082313 - L1MB7 LINE L1 -172 6012 5470 14859 167 38 50 chr10 82506977 82508029 -63081259 - L1 LINE L1 -2297 5268 4205 892 112 86 20 chr10 82508029 82508181 -63081107 + THE1C LTR MaLR 180 341 -34 14859 167 38 50 chr10 82508181 82508586 -63080702 - L1 LINE L1 -3360 4205 3797 189 0 0 0 chr10 82508586 82508607 -63080681 + (TC)n Simple_repeat Simple_repeat 2 22 0 14859 167 38 50 chr10 82508607 82510786 -63078502 - L1 LINE L1 -3768 3797 1660 2005 113 71 41 chr10 82510786 82511150 -63078138 - THE1C LTR MaLR 0 375 1 14859 167 38 50 chr10 82511150 82511650 -63077638 - L1 LINE L1 -5905 1660 1155 1497 220 63 25 chr10 82511655 82512096 -63077192 - L1MB7 LINE L1 -1232 4914 4457 759 246 10 44 chr10 82512152 82512449 -63076839 - L1MB7 LINE L1 -1795 4351 4065 * 1122 250 99 31 chr10 82512444 82513129 -63076159 - L1MB7 LINE L1 -2637 3509 2778 * 2034 247 60 67 chr10 82513125 82514179 -63075109 - L1M4 LINE L1 -941 5205 4160 1101 270 48 46 chr10 82514205 82514770 -63074518 - L1MEc LINE L1 -5719 677 37 198 194 0 0 chr10 82517216 82517252 -63072036 - MIR SINE MIR -12 250 215 1917 189 28 19 chr10 82517259 82517692 -63071596 - L1MB7 LINE L1 -5 6179 5743 993 227 95 7 chr10 82517729 82518033 -63071255 - L1MC4a LINE L1 -1 7807 7477 23 33 0 0 chr10 82518034 82518064 -63071224 + AT_rich Low_complexity Low_complexity 1 30 0 1465 223 3 14 chr10 82518064 82518356 -63070932 - AluJo SINE Alu -23 289 1 251 318 71 0 chr10 82518366 82518492 -63070796 - L1ME4a LINE L1 -11 6110 5976 273 285 69 7 chr10 82518526 82518670 -63070618 - L1ME4a LINE L1 -236 5885 5733 489 300 112 11 chr10 82518680 82518957 -63070331 - L1ME4a LINE L1 -484 5637 5333 25 0 0 0 chr10 82518959 82518984 -63070304 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr10 82519031 82519053 -63070235 + AT_rich Low_complexity Low_complexity 1 22 0 12451 229 51 23 chr10 82519058 82524187 -63065101 - L1PA16 LINE L1 -10 7594 2334 717 327 9 18 chr10 82524182 82524408 -63064880 - L1PA16 LINE L1 -6563 1011 788 * 283 182 0 18 chr10 82524620 82524675 -63064613 - LTR47A LTR ERVL -120 332 279 4256 151 41 47 chr10 82524732 82526162 -63063126 - L1MA4 LINE L1 -217 6083 4669 2999 221 59 11 chr10 82526166 82526930 -63062358 - L1MC4a LINE L1 -320 7488 6688 440 257 26 46 chr10 82526952 82527104 -63062184 - MIR SINE MIR -91 171 23 261 331 35 21 chr10 82527145 82527287 -63062001 + MIR SINE MIR 110 253 -9 2254 119 0 0 chr10 82528241 82528553 -63060735 - AluSx SINE Alu 0 312 1 337 277 109 54 chr10 82528693 82528877 -63060411 + MIR3 SINE MIR 1 194 -14 1152 223 69 40 chr10 82529267 82529643 -63059645 - LTR52 LTR ERVL -22 399 13 3677 192 36 17 chr10 82529643 82530136 -63059152 + L1M4 LINE L1 4220 4739 -1407 2348 116 8 8 chr10 82530136 82530491 -63058797 + THE1A LTR MaLR 1 355 0 3677 192 36 17 chr10 82530491 82530893 -63058395 + L1M4 LINE L1 4739 5132 -1014 1189 208 14 58 chr10 82530934 82531227 -63058061 - LTR52-int LTR ERVL -2007 1549 1270 3028 227 66 70 chr10 82531337 82532487 -63056801 - LTR52-int LTR ERVL -2329 1227 83 1357 206 48 43 chr10 82532545 82532962 -63056326 - LTR52 LTR ERVL -1 420 2 1873 161 7 0 chr10 82533688 82533986 -63055302 - AluJb SINE Alu -12 300 1 613 265 85 74 chr10 82534259 82534529 -63054759 + L1MEd LINE L1 611 876 -5253 4564 38 4 0 chr10 82534529 82535079 -63054209 - L1PA4 LINE L1 -3 6152 5601 613 265 85 74 chr10 82535079 82535781 -63053507 + L1MEd LINE L1 876 1594 -4535 258 81 0 0 chr10 82536106 82536143 -63053145 + (TA)n Simple_repeat Simple_repeat 2 38 0 642 274 107 44 chr10 82536241 82536399 -63052889 + L1MEd LINE L1 2136 2283 -3846 766 83 8 8 chr10 82536399 82536520 -63052768 + (TCTA)n Simple_repeat Simple_repeat 2 122 0 642 274 107 44 chr10 82536520 82536672 -63052616 + L1MEd LINE L1 2283 2424 -3705 450 204 38 86 chr10 82536672 82536858 -63052430 - MER104 DNA MER2_type -2 178 2 642 274 107 44 chr10 82536858 82537203 -63052085 + L1MEd LINE L1 2424 2833 -3296 901 163 0 0 chr10 82537209 82537350 -63051938 + AluSq/x SINE Alu 1 141 -172 351 260 7 68 chr10 82537479 82537625 -63051663 + L1MEd LINE L1 3920 4056 -2073 258 288 12 0 chr10 82537792 82537872 -63051416 - L1M2 LINE L1 -725 5575 5495 230 383 111 9 chr10 82538836 82539053 -63050235 + L2 LINE L2 2808 3046 -226 2602 40 0 3 chr10 82539315 82539616 -63049672 - AluY SINE Alu -11 300 1 234 301 46 39 chr10 82539703 82539856 -63049432 - L1ME LINE L1 -400 5721 5568 337 259 25 0 chr10 82540570 82540651 -63048637 + L2 LINE L2 3231 3313 0 192 343 0 27 chr10 82540677 82540750 -63048538 - L2 LINE L2 -2 3270 3200 248 305 76 66 chr10 82543593 82543790 -63045498 + L2 LINE L2 3112 3310 -3 378 367 27 11 chr10 82543861 82544049 -63045239 - MIR SINE MIR -36 226 36 541 283 24 45 chr10 82544368 82544615 -63044673 - MLT1J LTR MaLR -29 482 241 453 0 0 0 chr10 82544933 82544983 -63044305 - L1PA2 LINE L1 -205 5950 5901 1451 17 28 0 chr10 82544983 82545207 -63044081 + L1PA2 LINE L1 5961 6190 0 372 308 19 0 chr10 82545501 82545605 -63043683 + MIR SINE MIR 10 115 -147 571 239 38 25 chr10 82545745 82545904 -63043384 + MIR SINE MIR 102 262 0 224 339 0 0 chr10 82546050 82546115 -63043173 - L2 LINE L2 -22 3291 3227 297 287 62 37 chr10 82546331 82546575 -63042713 + L1ME4a LINE L1 5631 5880 -241 415 224 118 29 chr10 82546580 82546750 -63042538 + L1ME4a LINE L1 5936 6120 -1 420 272 134 71 chr10 82546840 82547108 -63042180 - MLT1J LTR MaLR -4 507 223 325 254 25 25 chr10 82547355 82547477 -63041811 + MIR SINE MIR 107 228 -34 255 311 106 45 chr10 82547523 82547655 -63041633 - MIR SINE MIR -17 245 106 224 263 158 21 chr10 82547688 82547783 -63041505 + MER5B DNA MER1_type 1 108 -70 356 234 40 32 chr10 82548638 82548762 -63040526 + MIR SINE MIR 137 261 -1 239 240 0 0 chr10 82548777 82548827 -63040461 + GA-rich Low_complexity Low_complexity 2 51 0 1953 238 54 30 chr10 82549512 82550180 -63039108 - L1M4 LINE L1 -2031 4115 3432 1848 57 0 0 chr10 82550226 82550455 -63038833 - L1PA7 LINE L1 -17 6137 5909 248 289 35 53 chr10 82550774 82550888 -63038400 - L2 LINE L2 -169 3103 2992 210 105 0 0 chr10 82551317 82551355 -63037933 + (GA)n Simple_repeat Simple_repeat 1 38 0 185 291 118 24 chr10 82551658 82551785 -63037503 - L3 LINE CR1 -1228 349 211 331 287 37 28 chr10 82552063 82552171 -63037117 - L2 LINE L2 -17 3296 3188 219 203 102 51 chr10 82552176 82552235 -63037053 - L2 LINE L2 -2 3270 3209 638 239 167 105 chr10 82552386 82552805 -63036483 + MLT1J2 LTR MaLR 6 450 0 222 396 9 9 chr10 82552973 82553079 -63036209 - MIR SINE MIR -73 135 30 314 231 0 0 chr10 82553261 82553326 -63035962 + L2 LINE L2 3236 3300 -13 189 147 0 0 chr10 82553421 82553455 -63035833 + (GGAA)n Simple_repeat Simple_repeat 2 35 0 710 267 39 90 chr10 82553799 82553946 -63035342 - L1MC4 LINE L1 -3 8039 7886 228 67 0 0 chr10 82553946 82553976 -63035312 + (TTTTA)n Simple_repeat Simple_repeat 2 31 0 2030 129 4 0 chr10 82553978 82554258 -63035030 - AluSq SINE Alu -31 282 2 710 267 39 90 chr10 82554258 82554564 -63034724 - L1MC4 LINE L1 -157 7885 7606 324 177 35 5 chr10 82554569 82554683 -63034605 + MER5A DNA MER1_type 4 175 -14 2073 221 129 32 chr10 82554688 82555465 -63033823 - L1MC4 LINE L1 -428 7614 6763 1611 211 94 23 chr10 82555605 82555998 -63033290 - MLT1D LTR MaLR -81 424 4 920 276 121 45 chr10 82556006 82556633 -63032655 - L1MC4a LINE L1 -1276 6532 5858 579 133 0 0 chr10 82556634 82556739 -63032549 + (TA)n Simple_repeat Simple_repeat 2 106 0 229 188 0 62 chr10 82556760 82556808 -63032480 - L1MC4a LINE L1 -1938 5870 5826 191 292 105 6 chr10 82557580 82557671 -63031617 - MIR SINE MIR -68 140 49 198 0 0 0 chr10 82558167 82558189 -63031099 + (CA)n Simple_repeat Simple_repeat 1 22 0 280 296 44 0 chr10 82558266 82558401 -63030887 + (CA)n Simple_repeat Simple_repeat 2 142 0 1823 161 7 0 chr10 82559401 82559692 -63029596 + AluSx SINE Alu 1 293 -19 276 224 0 0 chr10 82560196 82560263 -63029025 + (TG)n Simple_repeat Simple_repeat 2 68 0 414 39 0 0 chr10 82561492 82561544 -63027744 + (TG)n Simple_repeat Simple_repeat 2 53 0 444 161 0 0 chr10 82562856 82562937 -63026351 + (CA)n Simple_repeat Simple_repeat 2 82 0 231 103 0 0 chr10 82563338 82563377 -63025911 + (T)n Simple_repeat Simple_repeat 1 39 0 375 23 0 0 chr10 82563821 82563865 -63025423 + (TTA)n Simple_repeat Simple_repeat 2 45 0 877 183 56 6 chr10 82564066 82564246 -63025042 + MER5A DNA MER1_type 1 189 0 189 0 0 0 chr10 82564952 82564973 -63024315 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 216 0 0 0 chr10 82565677 82565701 -63023587 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 202 306 0 56 chr10 82566384 82566456 -63022832 + MIR3 SINE MIR 116 183 -25 206 234 0 0 chr10 82569606 82569653 -63019635 - L2 LINE L2 0 3313 3267 258 260 123 0 chr10 82569655 82569728 -63019560 + Tigger5 DNA MER2_type 1 82 -2241 393 203 13 0 chr10 82569784 82569863 -63019425 + Tigger5 DNA MER2_type 2244 2323 0 502 281 33 13 chr10 82570765 82570918 -63018370 - MIR3 SINE MIR -18 190 35 22 0 0 0 chr10 82571847 82571869 -63017419 + AT_rich Low_complexity Low_complexity 1 22 0 329 0 24 0 chr10 82573053 82573094 -63016194 + (TG)n Simple_repeat Simple_repeat 2 43 0 198 0 0 0 chr10 82573950 82573972 -63015316 + (A)n Simple_repeat Simple_repeat 1 22 0 2505 67 0 6 chr10 82574523 82574836 -63014452 - AluY SINE Alu 0 311 1 22 0 0 0 chr10 82576310 82576332 -63012956 + AT_rich Low_complexity Low_complexity 1 22 0 276 77 0 0 chr10 82578378 82578417 -63010871 + (TG)n Simple_repeat Simple_repeat 2 40 0 885 263 92 62 chr10 82582224 82582864 -63006424 + L2 LINE L2 2527 3182 -131 706 306 14 9 chr10 82583680 82583899 -63005389 - MIR SINE MIR -37 225 6 382 298 37 43 chr10 82584585 82584773 -63004515 + MARNA DNA Mariner 393 579 -7 718 171 128 28 chr10 82584937 82585148 -63004140 + MER96B DNA MER1_type? 2 233 -184 2581 58 0 0 chr10 82585191 82585500 -63003788 + AluY SINE Alu 1 309 -2 539 61 49 0 chr10 82586294 82586376 -63002912 - L1MC1 LINE L1 0 6333 6248 268 278 26 9 chr10 82586481 82586596 -63002692 + L1M4 LINE L1 2425 2541 -3605 2281 113 10 0 chr10 82586926 82587228 -63002060 - AluSx SINE Alu -7 305 1 693 304 109 40 chr10 82587505 82587999 -63001289 - L1M4 LINE L1 -877 5269 4742 587 240 29 0 chr10 82588042 82588213 -63001075 - L1M4 LINE L1 -813 5402 5227 629 228 66 18 chr10 82588237 82588465 -63000823 - L1MD3 LINE L1 -2 7993 7755 2052 255 77 42 chr10 82588466 82589429 -62999859 - L1MEc LINE L1 -2897 3318 2390 833 177 0 0 chr10 82589429 82589559 -62999729 - FLAM_C SINE Alu -3 130 1 2052 255 77 42 chr10 82589559 82590067 -62999221 - L1MEc LINE L1 -3825 2390 1901 315 0 0 0 chr10 82590067 82590102 -62999186 + (CA)n Simple_repeat Simple_repeat 2 36 0 2052 255 77 42 chr10 82590102 82590607 -62998681 - L1MEc LINE L1 -4314 1901 1297 195 42 0 0 chr10 82591266 82591290 -62997998 + (TG)n Simple_repeat Simple_repeat 2 25 0 490 290 92 23 chr10 82591360 82591839 -62997449 + HAL1 LINE L1 812 1323 -1184 416 250 16 0 chr10 82591985 82592113 -62997175 + HAL1 LINE L1 1523 1652 -855 817 308 41 39 chr10 82592124 82592615 -62996673 + MLT1J LTR MaLR 20 511 0 189 0 0 0 chr10 82593204 82593225 -62996063 + (TTTTA)n Simple_repeat Simple_repeat 1 21 0 5719 94 11 4 chr10 82593225 82594062 -62995226 - L1PA10 LINE L1 -21 6147 5305 339 338 84 21 chr10 82594138 82594280 -62995008 + L2 LINE L2 3122 3272 0 449 264 49 15 chr10 82594939 82595114 -62994174 + MIR SINE MIR 17 205 -57 23 0 0 0 chr10 82595119 82595142 -62994146 + AT_rich Low_complexity Low_complexity 1 23 0 442 320 88 41 chr10 82595720 82596014 -62993274 - L3 LINE CR1 -254 1323 1016 387 265 61 64 chr10 82597623 82597831 -62991457 - MIR SINE MIR -46 216 13 474 18 0 0 chr10 82598013 82598025 -62991263 + (CA)n Simple_repeat Simple_repeat 1 12 -415 2175 125 36 31 chr10 82598025 82598385 -62990903 - THE1B LTR MaLR 0 364 3 474 18 0 0 chr10 82598385 82598440 -62990848 + (CA)n Simple_repeat Simple_repeat 1 55 0 1853 184 0 0 chr10 82601150 82601459 -62987829 - AluSx SINE Alu -3 309 1 861 262 121 34 chr10 82601558 82602210 -62987078 - HAL1b LINE L1 -79 1269 561 412 284 61 91 chr10 82602246 82602510 -62986778 - HAL1b LINE L1 -645 703 448 1462 116 5 5 chr10 82602718 82602925 -62986363 + AluSx SINE Alu 1 207 -105 185 108 27 0 chr10 82603052 82603089 -62986199 + (TA)n Simple_repeat Simple_repeat 2 39 0 4362 158 33 12 chr10 82603096 82604020 -62985268 - L1PA14 LINE L1 -3 6158 5213 308 260 7 68 chr10 82605512 82605658 -62983630 - L1MEc LINE L1 -2073 4056 3920 918 163 0 0 chr10 82605787 82605928 -62983360 - AluSq/x SINE Alu -171 141 1 376 241 103 15 chr10 82605934 82606129 -62983159 - L1MEc LINE L1 -3296 2833 2622 545 286 74 56 chr10 82606161 82606279 -62983009 - L1MEc LINE L1 -3558 2571 2457 426 199 38 86 chr10 82606279 82606465 -62982823 + MER104 DNA MER2_type 2 178 -2 545 286 74 56 chr10 82606465 82606617 -62982671 - L1MEc LINE L1 -3672 2457 2309 730 86 8 8 chr10 82606617 82606734 -62982554 + (TAGA)n Simple_repeat Simple_repeat 2 118 0 545 286 74 56 chr10 82606734 82606910 -62982378 - L1MEc LINE L1 -3820 2309 2116 276 77 0 0 chr10 82606990 82607029 -62982259 + (TA)n Simple_repeat Simple_repeat 2 40 0 502 326 42 58 chr10 82607241 82607670 -62981618 - L1MEc LINE L1 -4561 1749 1328 342 273 76 51 chr10 82607731 82608046 -62981242 - L1MEc LINE L1 -4902 1217 895 2291 96 5 30 chr10 82608068 82608465 -62980823 + L1PA4 LINE L1 5601 5987 -168 3664 133 31 0 chr10 82609349 82609582 -62979706 + L1PB3 LINE L1 5543 5767 -387 207 0 0 0 chr10 82609582 82609605 -62979683 + (TA)n Simple_repeat Simple_repeat 2 24 0 * 369 62 0 0 chr10 82609604 82609652 -62979636 + (CA)n Simple_repeat Simple_repeat 2 49 0 3664 133 31 0 chr10 82609605 82610005 -62979283 + L1PB3 LINE L1 5767 6147 -7 28 0 0 0 chr10 82610005 82610033 -62979255 + AT_rich Low_complexity Low_complexity 1 28 0 929 267 79 24 chr10 82610062 82610609 -62978679 + L1M4 LINE L1 4697 5273 -873 333 277 126 0 chr10 82610625 82610744 -62978544 + L1MC/D LINE L1 4698 4831 -1315 443 326 48 39 chr10 82610766 82610999 -62978289 + L1MC/D LINE L1 4925 5164 -982 1701 167 3 7 chr10 82610999 82611323 -62977965 + AluJb SINE Alu 2 324 0 443 326 48 39 chr10 82611323 82611425 -62977863 + L1MC/D LINE L1 5164 5264 -882 318 319 46 66 chr10 82611428 82611946 -62977342 + L1MC/D LINE L1 5268 5775 -2033 1260 146 0 0 chr10 82612254 82612432 -62976856 + AluSg/x SINE Alu 103 280 -32 209 116 0 23 chr10 82612515 82612558 -62976730 + (TTTTG)n Simple_repeat Simple_repeat 3 44 0 23 33 0 0 chr10 82612852 82612882 -62976406 + AT_rich Low_complexity Low_complexity 1 30 0 6717 221 40 34 chr10 82613717 82615222 -62974066 - L1PBa LINE L1 -2024 4838 3305 2210 95 10 20 chr10 82615222 82615527 -62973761 - AluSc SINE Alu -7 302 1 6717 221 40 34 chr10 82615527 82616682 -62972606 - L1PBa LINE L1 -3557 3305 2158 300 266 78 16 chr10 82617112 82617240 -62972048 - L1M4 LINE L1 -2400 3746 3611 333 333 57 39 chr10 82617609 82618224 -62971064 - L1M4 LINE L1 -3316 2830 2173 1288 196 40 63 chr10 82618590 82618988 -62970300 + MLT2C1 LTR ERVL 1 389 -8 794 161 0 32 chr10 82619337 82619461 -62969827 - FLAM_A SINE Alu -13 120 1 22 35 0 0 chr10 82619463 82619492 -62969796 + AT_rich Low_complexity Low_complexity 1 29 0 290 262 52 86 chr10 82619831 82620041 -62969247 - HAL1b LINE L1 -457 891 689 498 329 22 40 chr10 82620052 82620128 -62969160 + MER115 DNA AcHobo 12 88 -605 1553 192 29 60 chr10 82620128 82620274 -62969014 + MLT1A2 LTR MaLR 1 150 -224 2374 91 0 3 chr10 82620274 82620581 -62968707 - AluY SINE Alu -5 306 1 1553 192 29 60 chr10 82620581 82620820 -62968468 + MLT1A2 LTR MaLR 150 374 0 498 329 22 40 chr10 82620820 82620968 -62968320 + MER115 DNA AcHobo 88 232 -461 390 295 64 23 chr10 82621036 82621309 -62967979 + L1MCa LINE L1 1549 2021 -4586 259 268 66 48 chr10 82621484 82621756 -62967532 + L1MCa LINE L1 2234 2510 -4097 * 10001 38 1 0 chr10 82621753 82623037 -62966251 - L1PA5 LINE L1 -828 5318 4034 6876 42 0 11 chr10 82623037 82623877 -62965411 + L1PA5 LINE L1 5311 6152 -2 265 300 136 19 chr10 82623882 82624242 -62965046 + L1MCa LINE L1 2467 2868 -3558 1016 186 16 5 chr10 82624322 82624515 -62964773 - MER20 DNA MER1_type 0 219 25 362 207 73 18 chr10 82624602 82624766 -62964522 + L1MCa LINE L1 3141 3313 -3113 1454 274 11 0 chr10 82625359 82625812 -62963476 + L1M4 LINE L1 5254 5711 -473 469 271 86 13 chr10 82625856 82626170 -62963118 + L1MCa LINE L1 3507 3843 -2583 376 295 51 13 chr10 82626251 82626407 -62962881 - L1 LINE L1 -2298 3848 3687 480 290 35 29 chr10 82626414 82626724 -62962564 + L1MCa LINE L1 3816 4127 -2299 912 272 78 11 chr10 82626726 82627267 -62962021 + L1MCa LINE L1 4247 4823 -1603 929 253 69 15 chr10 82627385 82627970 -62961318 + L1MEc LINE L1 1764 2277 -3938 * 3769 104 18 8 chr10 82627964 82628572 -62960716 + L1MA3 LINE L1 5532 6145 -160 * 39865 62 3 5 chr10 82628571 82634533 -62954755 + L1PA5 LINE L1 1 5947 -207 41 21 0 0 chr10 82634682 82634730 -62954558 + AT_rich Low_complexity Low_complexity 1 48 0 1002 126 25 20 chr10 82634747 82634945 -62954343 + L1PB4 LINE L1 5259 5457 -846 198 118 0 0 chr10 82634962 82634996 -62954292 + (CA)n Simple_repeat Simple_repeat 2 35 0 1971 142 31 6 chr10 82634996 82635348 -62953940 + L1PB4 LINE L1 5793 6153 -3 2508 119 6 0 chr10 82635577 82635939 -62953349 - THE1B LTR MaLR 0 364 1 9776 98 33 89 chr10 82635939 82637613 -62951675 - THE1B-int LTR MaLR 0 1580 1 2483 116 28 0 chr10 82637613 82637967 -62951321 - THE1B LTR MaLR 0 364 1 533 336 72 25 chr10 82638214 82638452 -62950836 - L2 LINE L2 -486 2828 2566 805 257 87 0 chr10 82638452 82638658 -62950630 - MER58A DNA MER1_type 0 224 1 533 336 72 25 chr10 82638658 82638779 -62950509 - L2 LINE L2 -748 2566 2452 584 298 60 13 chr10 82638838 82639073 -62950215 + LTR67 LTR ERVL 2 247 -310 523 362 9 9 chr10 82639217 82639441 -62949847 + L2 LINE L2 3090 3313 0 211 364 0 0 chr10 82642787 82642853 -62946435 + MIR SINE MIR 64 129 -133 255 229 16 16 chr10 82642897 82642958 -62946330 - L2 LINE L2 -63 3250 3190 447 0 15 31 chr10 82643810 82643875 -62945413 + (TATAA)n Simple_repeat Simple_repeat 1 64 0 315 0 0 0 chr10 82643881 82643916 -62945372 + (TG)n Simple_repeat Simple_repeat 1 35 0 258 261 43 0 chr10 82644289 82644358 -62944930 - MIR3 SINE MIR -45 163 92 505 323 94 49 chr10 82644413 82644819 -62944469 + L2 LINE L2 2890 3313 0 189 158 53 0 chr10 82645059 82645097 -62944191 - MIR SINE MIR -119 143 104 271 100 0 0 chr10 82645643 82645683 -62943605 - MLT2F LTR ERVL -4 659 620 997 312 88 12 chr10 82645710 82646201 -62943087 - MLT2F LTR ERVL -135 528 1 2263 86 10 0 chr10 82646785 82647087 -62942201 - AluY SINE Alu -6 305 1 261 119 0 0 chr10 82648404 82648446 -62940842 + (TTCTCC)n Simple_repeat Simple_repeat 3 44 0 394 339 85 6 chr10 82649742 82649907 -62939381 + MIR SINE MIR 14 191 -71 306 279 81 29 chr10 82650392 82650528 -62938760 + MIR SINE MIR 23 165 -97 240 310 49 98 chr10 82651351 82651535 -62937753 + MIR SINE MIR 12 186 -76 204 294 73 15 chr10 82651635 82651703 -62937585 - MIR SINE MIR -168 94 23 201 94 0 0 chr10 82652058 82652090 -62937198 + (TG)n Simple_repeat Simple_repeat 2 33 0 392 307 8 8 chr10 82652253 82652380 -62936908 + L2 LINE L2 3187 3313 0 308 169 12 96 chr10 82652752 82652835 -62936453 - L3 LINE CR1 -865 712 637 190 333 16 16 chr10 82653914 82653977 -62935311 + L2 LINE L2 3246 3308 -5 413 325 110 0 chr10 82654809 82654963 -62934325 + MIR3 SINE MIR 33 203 -5 732 208 0 0 chr10 82655284 82655414 -62933874 + AluJo/FLAM SINE Alu 3 132 -180 1540 180 7 11 chr10 82655417 82655700 -62933588 + AluJo SINE Alu 1 282 -30 1053 153 17 3 chr10 82655731 82656033 -62933255 + (TA)n Simple_repeat Simple_repeat 1 306 0 21 0 0 0 chr10 82656035 82656056 -62933232 + AT_rich Low_complexity Low_complexity 1 21 0 352 290 169 6 chr10 82656912 82657095 -62932193 - MIR SINE MIR -36 226 14 198 0 0 0 chr10 82657959 82657981 -62931307 + (A)n Simple_repeat Simple_repeat 1 22 0 230 306 14 0 chr10 82659428 82659500 -62929788 + MIR SINE MIR 70 142 -66 255 344 75 25 chr10 82661067 82661227 -62928061 - L2 LINE L2 -5 3267 3100 215 122 0 24 chr10 82663307 82663348 -62925940 + (GGAA)n Simple_repeat Simple_repeat 2 41 0 412 216 152 46 chr10 82663662 82663838 -62925450 + MIR SINE MIR 11 186 -63 22 0 0 0 chr10 82664338 82664360 -62924928 + AT_rich Low_complexity Low_complexity 1 22 0 301 320 65 35 chr10 82665184 82665274 -62924014 + MIR SINE MIR 49 135 -127 2159 135 119 8 chr10 82665274 82665659 -62923629 + MSTA LTR MaLR 1 428 0 301 320 65 35 chr10 82665659 82665768 -62923520 + MIR SINE MIR 135 254 -8 22 0 0 0 chr10 82668271 82668293 -62920995 + AT_rich Low_complexity Low_complexity 1 22 0 225 247 87 19 chr10 82668666 82668839 -62920449 + MIR SINE MIR 113 260 -2 246 275 0 0 chr10 82668860 82668951 -62920337 + (CTA)n Simple_repeat Simple_repeat 3 93 0 3933 188 31 11 chr10 82669198 82670027 -62919261 - L1MB5 LINE L1 0 6174 5329 1288 204 111 28 chr10 82670018 82670371 -62918917 - MLT-int LTR MaLR -1336 399 18 * 721 157 149 8 chr10 82670387 82670521 -62918767 + MSTA LTR MaLR 242 394 -34 14214 220 17 8 chr10 82670533 82674835 -62914453 + L1PA16 LINE L1 1811 6151 -15 243 233 27 0 chr10 82675173 82675246 -62914042 + (TA)n Simple_repeat Simple_repeat 1 75 0 232 211 18 0 chr10 82675440 82675497 -62913791 + (TAA)n Simple_repeat Simple_repeat 3 60 0 828 159 0 0 chr10 82675703 82675829 -62913459 - FLAM_C SINE Alu -17 126 1 329 281 49 88 chr10 82675844 82676107 -62913181 + L1ME3 LINE L1 2157 2409 -3987 290 235 10 0 chr10 82676124 82676222 -62913066 + L1MC5 LINE L1 7827 7925 -36 1609 209 0 7 chr10 82676229 82676530 -62912758 + AluJo SINE Alu 1 299 -13 2044 288 121 45 chr10 82676556 82677323 -62911965 + L1ME3 LINE L1 2364 3071 -3144 5354 13 0 0 chr10 82677323 82677969 -62911319 + L1PA3 LINE L1 5536 6181 0 2044 288 121 45 chr10 82677969 82679666 -62909622 + L1ME3 LINE L1 3071 5058 -1157 183 80 0 0 chr10 82679666 82679691 -62909597 + (TAAA)n Simple_repeat Simple_repeat 1 25 0 2044 288 121 45 chr10 82679691 82679953 -62909335 + L1ME3 LINE L1 5058 5299 -916 4317 189 64 30 chr10 82680074 82681925 -62907363 + L1MB2 LINE L1 4251 6164 -7 408 275 86 22 chr10 82681925 82682147 -62907141 + L1ME3 LINE L1 5384 5619 -612 772 306 39 16 chr10 82682631 82683013 -62906275 + L1ME3 LINE L1 5630 6020 -211 184 179 0 36 chr10 82683025 82683081 -62906207 + (TA)n Simple_repeat Simple_repeat 2 55 0 2233 123 0 0 chr10 82683325 82683635 -62905653 - AluSg SINE Alu 0 310 1 458 371 19 0 chr10 82684449 82684608 -62904680 + MIR3 SINE MIR 19 180 -28 198 0 0 0 chr10 82684612 82684634 -62904654 + (A)n Simple_repeat Simple_repeat 1 22 0 299 314 24 38 chr10 82684672 82684818 -62904470 - MIR3 SINE MIR -10 198 54 921 292 109 60 chr10 82685489 82686002 -62903286 - MLT1H LTR MaLR 0 549 12 334 396 14 14 chr10 82687113 82687252 -62902036 + L2 LINE L2 3133 3271 -1 3359 140 14 59 chr10 82688272 82688913 -62900375 - LTR9 LTR ERV1 0 612 1 837 238 99 14 chr10 82688994 82689217 -62900071 + MIR SINE MIR 21 262 0 197 311 41 25 chr10 82689366 82689488 -62899800 + L3 LINE CR1 1106 1229 -348 187 185 37 56 chr10 82689582 82689636 -62899652 + L2 LINE L2 3220 3272 0 442 289 35 35 chr10 82689782 82689979 -62899309 + MIR SINE MIR 8 204 -58 261 290 16 0 chr10 82690280 82690342 -62898946 - tRNA-Ile-ATT tRNA tRNA -14 63 1 2272 106 0 31 chr10 82690498 82690820 -62898468 + AluSx SINE Alu 1 312 0 199 364 26 0 chr10 82693431 82693508 -62895780 - L2 LINE L2 -227 3086 3008 429 314 68 14 chr10 82693862 82694069 -62895219 + MIR SINE MIR 18 235 -27 1315 223 93 20 chr10 82697281 82697635 -62891653 + MLT1B LTR MaLR 11 390 0 617 270 79 33 chr10 82698565 82698780 -62890508 - MIR SINE MIR -6 256 32 1859 174 248 2 chr10 82699279 82699687 -62889601 + MLT2B3 LTR ERVL 1 508 -46 601 56 47 9 chr10 82699688 82699795 -62889493 + (TCTA)n Simple_repeat Simple_repeat 3 113 0 266 24 71 0 chr10 82699795 82699837 -62889451 + MADE1 DNA Mariner 3 47 -33 * 347 171 71 0 chr10 82699831 82699901 -62889387 - MADE1 DNA Mariner -5 75 1 320 84 35 0 chr10 82699908 82699966 -62889322 + MLT2B3 LTR ERVL 463 554 0 504 293 60 46 chr10 82700011 82700237 -62889051 + MIR SINE MIR 23 262 0 354 373 42 0 chr10 82700520 82700662 -62888626 - MIR3 SINE MIR -60 148 1 656 292 59 25 chr10 82700972 82701208 -62888080 + MIR SINE MIR 1 244 -18 346 342 18 9 chr10 82702038 82702152 -62887136 + L2 LINE L2 3154 3268 -4 274 219 62 0 chr10 82702210 82702274 -62887014 + MIR SINE MIR 88 155 -107 229 203 250 0 chr10 82702300 82702364 -62886924 - MIR SINE MIR -154 108 29 376 316 26 8 chr10 82702676 82702793 -62886495 + L2 LINE L2 3154 3272 0 478 239 0 18 chr10 82703717 82703830 -62885458 + L2 LINE L2 3203 3313 0 194 286 20 61 chr10 82703877 82703975 -62885313 + L2 LINE L2 2954 3047 -225 1144 124 35 0 chr10 82703980 82704182 -62885106 - L1MA4 LINE L1 -11 6289 6081 2340 59 0 33 chr10 82704367 82704695 -62884593 - AluY SINE Alu 0 311 1 850 278 35 12 chr10 82704784 82705039 -62884249 + MIR SINE MIR 2 262 0 394 134 134 0 chr10 82705100 82705167 -62884121 + AluJ/FLAM SINE Alu 1 76 -226 314 324 138 56 chr10 82705252 82705607 -62883681 + MLT1K LTR MaLR 96 479 -109 923 271 128 36 chr10 82705612 82706058 -62883230 - MLT1G1 LTR MaLR 0 595 109 2354 62 6 50 chr10 82707421 82707760 -62881528 - L1PA6 LINE L1 -1 6153 5830 6613 50 143 50 chr10 82707760 82708830 -62880458 - MER11A LTR ERVK 0 1266 1 460 85 0 0 chr10 82708830 82708889 -62880399 - L1PA6 LINE L1 -319 5835 5777 * 3458 33 0 3 chr10 82708884 82709346 -62879942 + L1P2 LINE L1 5207 5667 -487 367 202 131 10 chr10 82709921 82710020 -62879268 + MER103 DNA DNA 12 122 -44 746 281 49 18 chr10 82710267 82710491 -62878797 - MIR SINE MIR -30 232 2 2825 224 14 70 chr10 82710769 82711761 -62877527 + L1M4 LINE L1 3015 3951 -2195 4028 214 105 32 chr10 82711762 82713737 -62875551 - L1MCc LINE L1 -3212 3729 1611 225 345 67 25 chr10 82713750 82713869 -62875419 - MLT1K LTR MaLR -455 133 10 1188 157 9 14 chr10 82714108 82714318 -62874970 - MER3 DNA MER1_type 0 209 1 434 265 65 73 chr10 82715018 82715263 -62874025 - MIR SINE MIR -6 256 14 207 0 0 0 chr10 82715392 82715415 -62873873 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 369 396 14 22 chr10 82715508 82715647 -62873641 - L2 LINE L2 -48 3224 3087 1231 227 63 30 chr10 82715676 82716007 -62873281 + MER97c DNA MER1_type? 12 353 -737 741 243 100 40 chr10 82716032 82716382 -62872906 + MER97a DNA MER1_type? 523 893 -1 1444 228 63 15 chr10 82716757 82717676 -62871612 - L1MD3 LINE L1 -17 7978 6830 1419 243 39 53 chr10 82717760 82718523 -62870765 - L1MCc LINE L1 -4897 1526 981 385 302 30 64 chr10 82718554 82718789 -62870499 - L1 LINE L1 -3013 3133 2907 22050 161 28 16 chr10 82719220 82721887 -62867401 + L1M1 LINE L1 16 2649 -4916 180 111 0 0 chr10 82721887 82721914 -62867374 + (TA)n Simple_repeat Simple_repeat 1 27 0 22050 161 28 16 chr10 82721914 82722571 -62866717 + L1M1 LINE L1 2649 3297 -4268 8673 32 0 33 chr10 82722571 82724407 -62864881 + L1PA3 LINE L1 4351 6155 0 22050 161 28 16 chr10 82724407 82727599 -62861689 + L1M1 LINE L1 3297 6612 -953 14074 208 24 7 chr10 82727581 82733440 -62855848 + L1P5 LINE L1 35 6261 -606 * 183 42 0 0 chr10 82733771 82733795 -62855493 + (TTG)n Simple_repeat Simple_repeat 3 26 0 187 245 47 132 chr10 82733904 82734010 -62855278 - MIR SINE MIR -59 149 53 228 326 62 7 chr10 82734092 82734236 -62855052 + MIR SINE MIR 100 251 -11 2305 98 10 0 chr10 82734426 82734723 -62854565 + AluSc SINE Alu 1 300 -9 248 346 8 16 chr10 82734865 82734992 -62854296 - L3 LINE CR1 -143 1434 1309 456 279 93 14 chr10 82736240 82736380 -62852908 - MIR SINE MIR -106 156 6 284 323 0 0 chr10 82736386 82736482 -62852806 + L2 LINE L2 710 805 -2509 3318 181 34 27 chr10 82736581 82737312 -62851976 - L1MA9 LINE L1 -38 6274 5539 422 295 0 9 chr10 82737688 82737800 -62851488 + MER5B DNA MER1_type 8 118 -60 331 226 0 75 chr10 82737801 82737894 -62851394 - L1MC4 LINE L1 -1343 6699 6614 2141 107 0 0 chr10 82737894 82738198 -62851090 - AluSc SINE Alu 0 304 1 273 246 0 31 chr10 82738200 82738265 -62851023 + MER5B DNA MER1_type 116 178 0 276 351 36 48 chr10 82738294 82738462 -62850826 - MER5A DNA MER1_type -7 182 17 336 366 139 8 chr10 82738794 82739190 -62850098 + L2 LINE L2 2018 2465 -849 219 69 0 0 chr10 82740449 82740478 -62848810 + (TC)n Simple_repeat Simple_repeat 2 30 0 471 248 17 8 chr10 82741223 82741340 -62847948 + HsTC2 DNA Tc2 4 121 -1777 232 154 0 0 chr10 82741347 82741386 -62847902 + HsTC2 DNA Tc2 1238 1276 -622 285 29 0 0 chr10 82741386 82741420 -62847868 + (A)n Simple_repeat Simple_repeat 1 34 0 235 259 62 62 chr10 82741527 82741639 -62847649 - MLT1L LTR MaLR -73 542 431 249 275 14 0 chr10 82741927 82741996 -62847292 - MIR SINE MIR -90 172 103 200 305 48 57 chr10 82741998 82742103 -62847185 - MIR SINE MIR -75 187 84 2447 93 0 0 chr10 82742401 82742712 -62846576 - AluY SINE Alu 0 311 1 702 270 30 51 chr10 82743125 82743421 -62845867 + MLT1K LTR MaLR 199 488 -100 2353 141 35 33 chr10 82743627 82743981 -62845307 + MSTA LTR MaLR 1 358 -70 1913 137 17 3 chr10 82743981 82744273 -62845015 - AluY SINE Alu -15 296 1 2353 141 35 33 chr10 82744273 82744345 -62844943 + MSTA LTR MaLR 358 428 0 253 281 9 26 chr10 82744454 82744568 -62844720 + (TATG)n Simple_repeat Simple_repeat 3 114 0 2263 86 3 0 chr10 82744936 82745228 -62844060 + AluY SINE Alu 1 293 -18 344 286 0 24 chr10 82747427 82747511 -62841777 + MER5A DNA MER1_type 1 82 -107 247 204 0 0 chr10 82747675 82747724 -62841564 + L2 LINE L2 3265 3313 0 509 292 76 38 chr10 82747745 82747814 -62841474 + MIR SINE MIR 2 67 -195 2430 115 21 16 chr10 82747814 82748187 -62841101 + THE1C LTR MaLR 1 375 0 509 292 76 38 chr10 82748187 82748353 -62840935 + MIR SINE MIR 67 246 -16 285 340 17 23 chr10 82748602 82748785 -62840503 + CT-rich Low_complexity Low_complexity 1 181 0 308 265 74 49 chr10 82749188 82749350 -62839938 + L3 LINE CR1 1407 1572 -5 2126 99 20 3 chr10 82749757 82750059 -62839229 - AluSx SINE Alu -5 307 1 261 285 123 15 chr10 82751604 82751734 -62837554 - MIR SINE MIR -14 248 105 184 324 152 9 chr10 82751735 82751840 -62837448 - MIR SINE MIR -62 146 27 261 279 15 0 chr10 82751938 82752006 -62837282 + MIR3 SINE MIR 97 165 -43 241 260 0 39 chr10 82752245 82752349 -62836939 + (CATATA)n Simple_repeat Simple_repeat 2 101 0 216 97 0 0 chr10 82752777 82752808 -62836480 + (TG)n Simple_repeat Simple_repeat 2 32 0 24 0 0 0 chr10 82752909 82752933 -62836355 + AT_rich Low_complexity Low_complexity 1 24 0 217 201 28 0 chr10 82753280 82753338 -62835950 + MIR SINE MIR 93 134 -74 854 101 0 0 chr10 82754821 82754950 -62834338 + L1MA7 LINE L1 6155 6283 -8 23 54 0 0 chr10 82757232 82757269 -62832019 + AT_rich Low_complexity Low_complexity 1 37 0 1700 199 0 3 chr10 82758998 82759300 -62829988 - AluJo SINE Alu -11 301 1 2322 243 125 33 chr10 82759483 82760397 -62828891 - L1ME1 LINE L1 -130 6036 5208 1457 55 221 59 chr10 82760397 82760650 -62828638 + AluY SINE Alu 1 294 -7 2328 78 0 31 chr10 82760655 82760976 -62828312 + AluY SINE Alu 1 311 0 2322 243 125 33 chr10 82760976 82761639 -62827649 - L1ME1 LINE L1 -961 5205 4605 1933 133 18 0 chr10 82761639 82761943 -62827345 - AluSx SINE Alu 0 309 1 2322 243 125 33 chr10 82761943 82762251 -62827037 - L1ME1 LINE L1 -1561 4605 3974 2080 230 71 78 chr10 82762255 82763117 -62826171 + L1M4 LINE L1 4475 5330 -816 367 252 44 73 chr10 82763168 82763374 -62825914 + L1MEc LINE L1 1257 1456 -4940 982 280 64 10 chr10 82763468 82763764 -62825524 + LTR16C LTR ERVL 170 481 -10 777 222 0 12 chr10 82763804 82763975 -62825313 + L1PB4 LINE L1 5985 6153 -3 4613 154 1 4 chr10 82764862 82765658 -62823630 + L1PB4 LINE L1 5372 6165 0 1220 253 90 84 chr10 82765963 82766552 -62822736 + L1MCb LINE L1 1 768 -5566 27 29 0 0 chr10 82766612 82766646 -62822642 + AT_rich Low_complexity Low_complexity 1 34 0 8486 234 92 46 chr10 82766687 82768222 -62821066 + L1MD3 LINE L1 554 2017 -6396 247 179 62 18 chr10 82768222 82768334 -62820954 + (TA)n Simple_repeat Simple_repeat 2 118 0 8486 234 92 46 chr10 82768334 82771857 -62817431 + L1MD3 LINE L1 2017 6207 -2206 2745 155 32 28 chr10 82771857 82772385 -62816903 - L1MB3 LINE L1 -1 6182 5653 8486 234 92 46 chr10 82772385 82774585 -62814703 + L1MD3 LINE L1 6207 8305 -108 197 338 29 0 chr10 82775163 82775231 -62814057 - MIR SINE MIR -73 135 66 21 0 0 0 chr10 82776053 82776074 -62813214 + AT_rich Low_complexity Low_complexity 1 21 0 250 353 52 11 chr10 82776096 82776233 -62813055 + MIR SINE MIR 7 146 -62 543 282 6 29 chr10 82776346 82776520 -62812768 - MLT1K LTR MaLR -17 571 402 1779 77 0 30 chr10 82776701 82776936 -62812352 - AluSg/x SINE Alu 0 310 83 905 323 68 26 chr10 82776939 82777691 -62811597 + L2 LINE L2 2469 3270 -2 594 333 112 21 chr10 82778477 82778898 -62810390 - L3 LINE CR1 -975 602 144 262 280 85 8 chr10 82779587 82779705 -62809583 - L1ME LINE L1 -429 5692 5566 635 302 29 43 chr10 82779960 82780238 -62809050 + MER110 LTR ERV1 166 439 -52 204 214 0 24 chr10 82780575 82780617 -62808671 + GA-rich Low_complexity Low_complexity 4 44 0 200 237 21 21 chr10 82780632 82780729 -62808559 + GA-rich Low_complexity Low_complexity 3 99 0 403 299 82 43 chr10 82780897 82781128 -62808160 - L1ME LINE L1 -553 5568 5329 620 300 89 59 chr10 82781219 82781388 -62807900 - L1ME LINE L1 -913 5233 5071 2174 120 0 0 chr10 82781388 82781680 -62807608 - AluSp SINE Alu -18 295 4 620 300 89 59 chr10 82781680 82782003 -62807285 - L1ME LINE L1 -1075 5071 4726 2274 91 0 10 chr10 82782708 82783017 -62806271 - AluSx SINE Alu -6 306 1 2887 219 71 19 chr10 82783845 82784633 -62804655 + L1ME2 LINE L1 5324 6152 -12 21 57 0 0 chr10 82784659 82784694 -62804594 + AT_rich Low_complexity Low_complexity 1 35 0 1620 182 30 3 chr10 82784746 82785042 -62804246 - AluJb SINE Alu -8 304 1 766 284 40 16 chr10 82786066 82786316 -62802972 + MIR SINE MIR 3 258 -4 386 304 74 0 chr10 82786574 82786722 -62802566 + MIR SINE MIR 92 250 -12 185 156 0 22 chr10 82786742 82786787 -62802501 + (CATATA)n Simple_repeat Simple_repeat 2 45 0 6464 153 43 14 chr10 82786980 82787209 -62802079 + Tigger3b DNA MER2_type 2 223 -2805 1192 165 169 8 chr10 82787209 82787457 -62801831 - AluSx SINE Alu -11 291 4 6464 153 43 14 chr10 82787457 82788403 -62800885 + Tigger3b DNA MER2_type 223 1212 -19 552 100 0 0 chr10 82788409 82788489 -62800799 + (TA)n Simple_repeat Simple_repeat 1 80 0 332 250 58 8 chr10 82788938 82789058 -62800230 - MER103 DNA DNA 0 166 41 1932 146 9 12 chr10 82790102 82790444 -62798844 - L1MB3 LINE L1 -3 6180 5840 1295 210 112 60 chr10 82790676 82791206 -62798082 + MLT1D LTR MaLR 44 505 0 395 370 7 0 chr10 82791390 82791544 -62797744 - L2 LINE L2 -3 3310 3156 1890 197 112 95 chr10 82791605 82792371 -62796917 - LTR1B LTR ERV1 -37 983 1 430 287 185 43 chr10 82792386 82792999 -62796289 - L2 LINE L2 -174 3139 2432 1103 232 17 4 chr10 82793492 82793729 -62795559 - MIR SINE MIR -5 257 18 759 163 8 0 chr10 82794520 82794643 -62794645 + MLT1B LTR MaLR 1 124 -266 1035 154 0 0 chr10 82794695 82794857 -62794431 + MLT1B LTR MaLR 228 389 -1 22 70 0 0 chr10 82794903 82794946 -62794342 + AT_rich Low_complexity Low_complexity 1 43 0 236 228 22 87 chr10 82794946 82795038 -62794250 - MIR SINE MIR -102 106 21 222 289 0 0 chr10 82795216 82795268 -62794020 + (TG)n Simple_repeat Simple_repeat 1 52 0 949 208 72 41 chr10 82797787 82798230 -62791058 - MLT1D LTR MaLR -1 504 1 241 241 103 35 chr10 82798235 82798351 -62790937 + L3 LINE CR1 1444 1567 -10 243 309 15 0 chr10 82798357 82798425 -62790863 + MIR SINE MIR 86 154 -108 246 295 40 40 chr10 82798438 82798611 -62790677 - L1ME LINE L1 -294 5827 5655 4930 153 1 0 chr10 82798986 82799817 -62789471 + L1P LINE L1 4238 5069 -1077 198 389 0 0 chr10 82799818 82799890 -62789398 - MIR SINE MIR -78 130 59 1011 220 148 119 chr10 82800202 82800729 -62788559 + MLT1E LTR MaLR 1 593 0 448 230 0 0 chr10 82801810 82801897 -62787391 - MIR3 SINE MIR -6 202 116 427 275 44 76 chr10 82802068 82802335 -62786953 + MIR SINE MIR 2 262 0 187 260 143 0 chr10 82802357 82802434 -62786854 + MIR SINE MIR 60 147 -61 1918 75 71 0 chr10 82805385 82805651 -62783637 - L1PA7 LINE L1 -3 6151 5867 6214 82 11 1 chr10 82806131 82807913 -62781375 - L1PA10 LINE L1 0 6168 4394 1871 165 42 0 chr10 82807946 82808280 -62781008 + MLT1B LTR MaLR 38 385 -5 315 0 0 0 chr10 82808280 82808315 -62780973 + (CA)n Simple_repeat Simple_repeat 2 36 0 24 0 0 0 chr10 82808502 82808526 -62780762 + AT_rich Low_complexity Low_complexity 1 24 0 1002 261 30 57 chr10 82808654 82809025 -62780263 + LTR45 LTR ERV1 159 519 -6 534 308 76 29 chr10 82809369 82809749 -62779539 - L1MEc LINE L1 -1769 4875 4478 1405 186 33 25 chr10 82809749 82810060 -62779228 - AluJo SINE Alu 0 318 6 247 320 33 0 chr10 82810117 82810239 -62779049 - L1MEc LINE L1 -2202 4442 4317 51 79 0 0 chr10 82810259 82810373 -62778915 + AT_rich Low_complexity Low_complexity 1 114 0 713 269 88 83 chr10 82810811 82811557 -62777731 - L1MEc LINE L1 -2657 3987 3238 339 259 42 35 chr10 82811776 82811919 -62777369 + L1MDa LINE L1 2435 2578 -3962 332 321 69 13 chr10 82812016 82812175 -62777113 + L1MDa LINE L1 2694 2861 -3679 1694 206 68 35 chr10 82812375 82812864 -62776424 + MLT1D LTR MaLR 1 505 0 307 303 85 24 chr10 82813358 82813523 -62775765 - L1ME4a LINE L1 -255 5866 5692 616 283 61 63 chr10 82813586 82814567 -62774721 - L1MEc LINE L1 -4548 2184 1078 564 316 22 40 chr10 82815096 82815374 -62773914 - L1MEc LINE L1 -6012 813 541 307 313 40 23 chr10 82815429 82815605 -62773683 - L1ME LINE L1 -5183 887 709 1577 261 48 21 chr10 82815663 82816245 -62773043 - L1ME3 LINE L1 0 6162 5565 334 272 101 39 chr10 82816360 82816525 -62772763 - L1ME3 LINE L1 -638 5524 5353 233 152 65 11 chr10 82816546 82816638 -62772650 + (TA)n Simple_repeat Simple_repeat 1 97 0 1999 229 56 12 chr10 82818142 82818626 -62770662 + MLT1D LTR MaLR 1 505 0 472 258 62 62 chr10 82818853 82819047 -62770241 + MIR SINE MIR 55 248 -14 225 0 0 0 chr10 82819771 82819796 -62769492 + (CA)n Simple_repeat Simple_repeat 1 25 0 2854 13 0 3 chr10 82819891 82820204 -62769084 + AluYb8 SINE Alu 1 312 -6 1780 231 77 53 chr10 82820290 82820875 -62768413 - L1MC4 LINE L1 -425 7617 7019 563 266 41 47 chr10 82820987 82821278 -62768010 - L1ME3 LINE L1 -1131 5015 4723 257 109 0 0 chr10 82821333 82821379 -62767909 + LTR66 LTR ERVL 394 439 -171 286 245 0 47 chr10 82821387 82821493 -62767795 + L1MC4 LINE L1 6614 6714 -1328 710 303 59 81 chr10 82821506 82822825 -62766463 - L1ME3 LINE L1 -1487 4659 3370 253 188 14 29 chr10 82822835 82822904 -62766384 - L1P LINE L1 -2878 3268 3201 294 29 0 0 chr10 82823278 82823313 -62765975 + (TG)n Simple_repeat Simple_repeat 2 36 0 314 334 76 62 chr10 82823313 82823360 -62765928 - L1ME3 LINE L1 -3435 2711 2666 2221 194 44 13 chr10 82823360 82823813 -62765475 - MLT1C LTR MaLR 0 467 1 314 334 76 62 chr10 82823813 82824265 -62765023 - L1ME3 LINE L1 -3480 2666 2205 209 277 12 0 chr10 82824360 82824443 -62764845 + T-rich Low_complexity Low_complexity 2 85 0 197 354 8 54 chr10 82824917 82825047 -62764241 + L2 LINE L2 923 1046 -2268 302 186 17 0 chr10 82825054 82825113 -62764175 - Charlie8 DNA MER1_type -995 1422 1363 245 379 70 12 chr10 82825256 82825499 -62763789 + L2 LINE L2 1079 1335 -1979 358 331 19 19 chr10 82825652 82825806 -62763482 + L2 LINE L2 3160 3313 0 827 217 7 0 chr10 82825883 82826026 -62763262 - MER58B DNA MER1_type -1 340 197 823 251 37 9 chr10 82826179 82826394 -62762894 + MIR SINE MIR 21 241 -21 274 338 62 41 chr10 82826432 82826577 -62762711 - MIR SINE MIR -48 214 67 2733 208 35 9 chr10 82826695 82827239 -62762049 + MLT1G LTR MaLR 10 567 -23 292 322 81 17 chr10 82827381 82827546 -62761742 + MIR SINE MIR 44 212 -50 342 0 0 0 chr10 82827719 82827757 -62761531 + (TG)n Simple_repeat Simple_repeat 2 39 0 398 287 0 0 chr10 82829152 82829253 -62760035 + L2 LINE L2 3180 3280 -33 234 237 0 0 chr10 82829256 82829332 -62759956 + GA-rich Low_complexity Low_complexity 2 77 0 1150 267 26 13 chr10 82829348 82829659 -62759629 - LTR53 LTR ERVL -7 512 198 397 234 34 117 chr10 82829747 82829952 -62759336 + MLT1J LTR MaLR 112 299 -212 276 226 0 0 chr10 82829988 82830041 -62759247 + HAL1 LINE L1 1647 1699 -808 278 259 7 43 chr10 82830056 82830195 -62759093 - L1ME LINE L1 -238 5883 5750 15327 50 4 78 chr10 82830572 82832749 -62756539 - L1P LINE L1 -4120 2026 12 7630 45 0 8 chr10 82832749 82834198 -62755090 + L1PA4 LINE L1 4728 6170 0 1667 68 34 13 chr10 82834534 82834770 -62754518 - L1P3 LINE L1 -622 5532 5292 501 0 0 0 chr10 82834769 82834823 -62754465 + L1P3 LINE L1 5595 5648 -524 * 2131 126 80 57 chr10 82834830 82835268 -62754020 + LTR7 LTR ERV1 1 448 -2 4045 101 17 29 chr10 82835320 82836010 -62753278 + HERVH LTR ERV1 1 620 -7093 17260 95 10 24 chr10 82836011 82838604 -62750684 + HERVH LTR ERV1 437 2995 -4718 844 128 28 0 chr10 82838583 82838724 -62750564 + HERVH LTR ERV1 3140 3284 -4429 * 951 154 0 0 chr10 82838730 82838873 -62750415 + HERVH LTR ERV1 3502 3644 -4069 * 2639 161 0 0 chr10 82838872 82839282 -62750006 + HERVH LTR ERV1 4740 5149 -2564 234 0 0 0 chr10 82839299 82839325 -62749963 + (A)n Simple_repeat Simple_repeat 1 26 0 1372 115 20 0 chr10 82839326 82839526 -62749762 + HERVH LTR ERV1 5616 5819 -1894 * 2490 89 45 16 chr10 82839524 82839905 -62749383 + HERVH LTR ERV1 7322 7713 0 2226 125 77 57 chr10 82839905 82840344 -62748944 + LTR7 LTR ERV1 1 448 -2 3877 93 6 2 chr10 82840345 82840860 -62748428 + L1PA8 LINE L1 5646 6162 -10 448 305 107 5 chr10 82841985 82842172 -62747116 - MIR SINE MIR -11 251 46 203 231 0 0 chr10 82842220 82842259 -62747029 + L2 LINE L2 3263 3301 -12 183 42 0 0 chr10 82842260 82842284 -62747004 + (TGAA)n Simple_repeat Simple_repeat 3 26 0 202 314 29 0 chr10 82844868 82844938 -62744350 - L2 LINE L2 -224 3048 2977 2339 113 0 0 chr10 82845844 82846153 -62743135 - AluY SINE Alu -2 309 1 218 337 9 28 chr10 82847274 82847391 -62741897 - MIR SINE MIR -81 127 16 2490 189 12 0 chr10 82847595 82848013 -62741275 + MSTB LTR MaLR 4 426 0 30 0 0 0 chr10 82848206 82848236 -62741052 + AT_rich Low_complexity Low_complexity 1 30 0 798 245 0 43 chr10 82848259 82848443 -62740845 + MER5A DNA MER1_type 2 177 -12 21 0 0 0 chr10 82849091 82849112 -62740176 + AT_rich Low_complexity Low_complexity 1 21 0 6819 21 0 0 chr10 82849113 82849881 -62739407 - L1HS LINE L1 -2 6153 5386 529 251 99 42 chr10 82850676 82850867 -62738421 - MIR SINE MIR -30 232 31 192 77 0 0 chr10 82851759 82851785 -62737503 + (T)n Simple_repeat Simple_repeat 1 26 0 2416 80 0 0 chr10 82852240 82852541 -62736747 + AluY SINE Alu 1 301 -10 425 330 52 12 chr10 82852748 82852921 -62736367 + MLT1K LTR MaLR 15 194 -394 1134 118 0 0 chr10 82853281 82853442 -62735846 - HERVH LTR ERV1 -7552 161 1 2194 123 77 57 chr10 82853494 82853933 -62735355 - LTR7 LTR ERV1 -2 448 1 501 0 0 0 chr10 82853940 82853994 -62735294 - L1PA8A LINE L1 -483 5648 5595 * 1667 68 34 13 chr10 82853993 82854229 -62735059 + L1P3 LINE L1 5292 5532 -622 246 32 0 0 chr10 82854565 82854596 -62734692 + (TTTTA)n Simple_repeat Simple_repeat 4 34 0 3994 77 0 0 chr10 82854596 82855090 -62734198 - L1PA4 LINE L1 -16 6139 5646 2194 128 77 57 chr10 82855091 82855530 -62733758 - LTR7 LTR ERV1 -2 448 1 2490 89 45 16 chr10 82855530 82855911 -62733377 - HERVH LTR ERV1 0 7713 7322 1372 115 20 0 chr10 82855909 82856109 -62733179 - HERVH LTR ERV1 -1894 5819 5616 * 216 0 0 0 chr10 82856110 82856134 -62733154 + (T)n Simple_repeat Simple_repeat 1 24 0 2444 183 0 0 chr10 82856151 82856561 -62732727 - HERVH LTR ERV1 -2564 5149 4740 702 203 14 14 chr10 82856560 82856703 -62732585 - HERVH LTR ERV1 -4069 3644 3502 * 844 128 28 0 chr10 82856709 82856850 -62732438 - HERVH LTR ERV1 -4429 3284 3140 * 17075 103 14 26 chr10 82856829 82859962 -62729326 - HERVH LTR ERV1 -4718 2995 24 336 64 0 0 chr10 82860216 82860263 -62729025 + (TG)n Simple_repeat Simple_repeat 1 47 0 406 298 46 7 chr10 82860513 82860664 -62728624 - L1M4 LINE L1 -1810 4336 4180 309 107 21 25 chr10 82860678 82860732 -62728556 - L1P3 LINE L1 -6087 374 10 1747 259 16 16 chr10 82860732 82861310 -62727978 + L1P LINE L1 4728 5305 -841 24 0 0 0 chr10 82861416 82861440 -62727848 + AT_rich Low_complexity Low_complexity 1 24 0 6606 136 30 11 chr10 82861440 82864034 -62725254 + L1MA2 LINE L1 2117 7723 0 646 283 64 23 chr10 82864051 82864535 -62724753 - L1M4 LINE L1 -2747 3399 2896 369 297 84 68 chr10 82864551 82864979 -62724309 - L1M4 LINE L1 -3382 2764 2330 1745 144 22 7 chr10 82864980 82865297 -62723991 - AluSx SINE Alu 0 328 8 258 111 0 0 chr10 82865458 82865494 -62723794 - U2 snRNA snRNA -152 36 1 221 0 0 33 chr10 82865717 82865747 -62723541 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 275 231 97 15 chr10 82866887 82867021 -62722267 + L1 LINE L1 3829 3973 -2173 1768 242 71 20 chr10 82867388 82868172 -62721116 + L1ME1 LINE L1 5314 6159 -7 1893 191 79 27 chr10 82868402 82868846 -62720442 + MLT1C LTR MaLR 1 467 0 510 302 45 52 chr10 82869059 82869503 -62719785 - L1MEc LINE L1 -2377 3838 3398 225 218 69 30 chr10 82869551 82869652 -62719636 - L1MEc LINE L1 -4653 1743 1639 347 225 162 52 chr10 82869811 82870002 -62719286 - L1 LINE L1 -2741 3405 3194 1122 112 0 0 chr10 82870228 82870380 -62718908 - AluSg/x SINE Alu -5 307 156 385 324 74 22 chr10 82870679 82870991 -62718297 - L1 LINE L1 -2925 3221 2894 340 211 0 18 chr10 82871149 82871258 -62718030 + (CATATA)n Simple_repeat Simple_repeat 3 109 0 8418 109 26 1 chr10 82871416 82872684 -62716604 + HSMAR2 DNA Mariner 2 1301 -1 3418 63 30 11 chr10 82872937 82873396 -62715892 - L1PA10 LINE L1 -3 6165 5698 23 54 0 0 chr10 82874288 82874325 -62714963 + AT_rich Low_complexity Low_complexity 1 37 0 525 331 128 22 chr10 82874657 82875023 -62714265 + MLT1L LTR MaLR 201 605 -10 588 240 80 45 chr10 82875027 82875354 -62713934 + L1MC/D LINE L1 5480 5820 -301 22 35 0 0 chr10 82875623 82875652 -62713636 + AT_rich Low_complexity Low_complexity 1 29 0 192 324 0 0 chr10 82876055 82876126 -62713162 + MIR SINE MIR 26 96 -166 902 248 18 14 chr10 82876455 82876677 -62712611 - MER58A DNA MER1_type 0 224 2 289 279 13 13 chr10 82878270 82878349 -62710939 + L2 LINE L2 3235 3313 0 180 324 113 0 chr10 82880359 82880430 -62708858 - L2 LINE L2 -25 3288 3210 198 200 0 0 chr10 82881067 82881107 -62708181 - L2 LINE L2 -3 3310 3271 1850 226 57 13 chr10 82883176 82883653 -62705635 + MLT1D LTR MaLR 8 505 0 465 258 62 62 chr10 82883880 82884074 -62705214 + MIR SINE MIR 55 248 -14 207 0 0 0 chr10 82884798 82884821 -62704467 + (CA)n Simple_repeat Simple_repeat 1 23 0 2818 13 0 3 chr10 82884916 82885229 -62704059 + AluYb8 SINE Alu 1 312 -6 1245 239 77 56 chr10 82885315 82885902 -62703386 - L1MC4 LINE L1 -425 7617 7019 464 250 32 51 chr10 82886029 82886245 -62703043 - L1M4 LINE L1 -1150 4996 4785 237 65 0 0 chr10 82886337 82886368 -62702920 + (TG)n Simple_repeat Simple_repeat 2 32 0 348 247 0 43 chr10 82886381 82886474 -62702814 - L1MC4 LINE L1 -1340 6702 6614 * 387 245 0 47 chr10 82886400 82886506 -62702782 + L1MC4 LINE L1 6614 6714 -1328 463 286 35 24 chr10 82886519 82886894 -62702394 - L1M4 LINE L1 -1487 4659 4275 276 293 73 0 chr10 82886930 82887053 -62702235 - L1M4 LINE L1 -1948 4198 4067 468 304 39 72 chr10 82887241 82887837 -62701451 - L1M4 LINE L1 -2201 3945 3370 341 277 130 17 chr10 82887846 82888023 -62701265 - L1M4 LINE L1 -2874 3272 3076 333 0 0 0 chr10 82888290 82888327 -62700961 + (TG)n Simple_repeat Simple_repeat 2 38 0 347 326 77 63 chr10 82888327 82888374 -62700914 - L1M4 LINE L1 -3435 2711 2666 2013 194 44 13 chr10 82888374 82888827 -62700461 - MLT1C LTR MaLR 0 467 1 347 326 77 63 chr10 82888827 82889347 -62699941 - L1M4 LINE L1 -3480 2666 2137 209 277 12 0 chr10 82889374 82889457 -62699831 + T-rich Low_complexity Low_complexity 2 85 0 201 354 8 54 chr10 82889931 82890061 -62699227 + L2 LINE L2 923 1046 -2268 280 186 17 0 chr10 82890068 82890127 -62699161 - Charlie8 DNA MER1_type -6 2411 2352 261 379 70 12 chr10 82890270 82890513 -62698775 + L2 LINE L2 1079 1335 -1979 374 331 19 19 chr10 82890666 82890820 -62698468 + L2 LINE L2 3160 3313 0 764 217 7 0 chr10 82890897 82891040 -62698248 - MER58B DNA MER1_type -1 340 197 836 251 37 9 chr10 82891193 82891408 -62697880 + MIR SINE MIR 21 241 -21 181 286 54 0 chr10 82891374 82891430 -62697858 + L2 LINE L2 3251 3309 -4 * 282 338 62 41 chr10 82891446 82891591 -62697697 - MIR SINE MIR -48 214 67 2513 208 35 9 chr10 82891709 82892253 -62697035 + MLT1G LTR MaLR 10 567 -23 297 322 84 16 chr10 82892395 82892560 -62696728 + MIR SINE MIR 44 212 -50 396 0 0 0 chr10 82892733 82892777 -62696511 + (TG)n Simple_repeat Simple_repeat 2 45 0 398 287 0 0 chr10 82894172 82894273 -62695015 + L2 LINE L2 3180 3280 -33 234 237 0 0 chr10 82894276 82894352 -62694936 + GA-rich Low_complexity Low_complexity 2 77 0 1039 280 19 6 chr10 82894368 82894679 -62694609 - LTR53 LTR ERVL -7 512 198 334 234 34 117 chr10 82894767 82894972 -62694316 + MLT1J LTR MaLR 112 299 -212 254 226 0 0 chr10 82895008 82895061 -62694227 + HAL1 LINE L1 1647 1699 -808 226 259 7 43 chr10 82895076 82895215 -62694073 - L1ME LINE L1 -238 5883 5750 14276 50 4 78 chr10 82895592 82897769 -62691519 - L1P LINE L1 -4120 2026 12 7164 44 0 8 chr10 82897769 82899218 -62690070 + L1PA4 LINE L1 4728 6170 0 1544 68 34 13 chr10 82899554 82899790 -62689498 - L1P3 LINE L1 -622 5532 5292 4011 81 5 22 chr10 82899790 82899850 -62689438 + L1PA8 LINE L1 5595 5655 -517 1941 132 77 57 chr10 82899850 82900289 -62688999 + LTR7 LTR ERV1 1 448 -2 4011 81 5 22 chr10 82900289 82900805 -62688483 + L1PA8 LINE L1 5655 6162 -10 456 305 107 5 chr10 82901930 82902117 -62687171 - MIR SINE MIR -11 251 46 202 231 0 0 chr10 82902165 82902204 -62687084 + L2 LINE L2 3263 3301 -12 183 42 0 0 chr10 82902205 82902229 -62687059 + (TGAA)n Simple_repeat Simple_repeat 3 26 0 217 329 26 0 chr10 82904807 82904883 -62684405 - L2 LINE L2 -218 3054 2977 2334 116 0 0 chr10 82905786 82906096 -62683192 - AluY SINE Alu -1 310 1 226 337 9 28 chr10 82907216 82907333 -62681955 - MIR SINE MIR -81 127 16 2314 188 12 0 chr10 82907539 82907955 -62681333 + MSTB LTR MaLR 6 426 0 30 0 0 0 chr10 82908148 82908178 -62681110 + AT_rich Low_complexity Low_complexity 1 30 0 811 245 0 43 chr10 82908201 82908385 -62680903 + MER5A DNA MER1_type 2 177 -12 6375 21 0 0 chr10 82909052 82909820 -62679468 - L1HS LINE L1 -2 6153 5386 533 251 99 42 chr10 82910612 82910803 -62678485 - MIR SINE MIR -30 232 31 246 62 0 0 chr10 82911695 82911727 -62677561 + (T)n Simple_repeat Simple_repeat 1 32 0 2390 83 0 0 chr10 82912182 82912483 -62676805 + AluY SINE Alu 1 301 -10 360 325 33 13 chr10 82912690 82912841 -62676447 + MLT1K LTR MaLR 15 168 -420 183 42 0 0 chr10 82913507 82913531 -62675757 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 239 171 0 0 chr10 82913537 82913578 -62675710 + MLT1K LTR MaLR 366 406 -182 7110 43 9 9 chr10 82913591 82914899 -62674389 + L1PA6 LINE L1 4846 6154 0 2305 101 0 10 chr10 82914922 82915230 -62674058 + AluY SINE Alu 1 305 -6 1497 259 92 28 chr10 82915230 82915882 -62673406 - L1M4 LINE L1 -1819 4327 3634 478 284 41 20 chr10 82915895 82916092 -62673196 + MLT1K LTR MaLR 366 566 -22 573 130 20 0 chr10 82916223 82916323 -62672965 - MER58 DNA MER1_type -1 2419 2318 910 218 47 121 chr10 82916327 82916731 -62672557 + MLT1A2 LTR MaLR 1 374 0 237 284 12 0 chr10 82916743 82916824 -62672464 - MER58 DNA MER1_type -2320 100 19 454 332 28 21 chr10 82917352 82917635 -62671653 - L1ME3A LINE L1 -271 5899 5615 195 42 0 0 chr10 82917646 82917670 -62671618 + (T)n Simple_repeat Simple_repeat 1 24 0 938 84 15 8 chr10 82917670 82917801 -62671487 - AluY SINE Alu -179 132 1 1603 232 117 81 chr10 82917937 82918119 -62671169 - L1MC5 LINE L1 -37 7924 7750 2317 95 3 0 chr10 82918119 82918413 -62670875 + AluSp SINE Alu 1 295 -18 1603 232 117 81 chr10 82918413 82919382 -62669906 - L1MC5 LINE L1 -211 7750 6726 462 36 0 0 chr10 82919382 82919438 -62669850 + (TG)n Simple_repeat Simple_repeat 2 57 0 1603 232 117 81 chr10 82919438 82919474 -62669814 - L1MC5 LINE L1 -1235 6726 6693 325 267 61 27 chr10 82919498 82919856 -62669432 - L1P4 LINE L1 -688 5478 5106 4678 236 21 16 chr10 82919897 82921137 -62668151 + L1M4b LINE L1 -295 988 -5558 1429 213 18 26 chr10 82921276 82921717 -62667571 + L1M4b LINE L1 997 1438 -5104 304 98 0 0 chr10 82921714 82921755 -62667533 + FRAM/FAM SINE Alu 6 46 -129 * 5900 178 32 2 chr10 82921757 82922754 -62666534 + L1M1 LINE L1 1102 2128 -5437 3833 39 1 6 chr10 82922760 82928779 -62660509 + L1PA4 LINE L1 7 6050 -105 180 182 0 0 chr10 82930530 82930574 -62658714 + CT-rich Low_complexity Low_complexity 2 45 0 351 189 27 14 chr10 82931201 82931275 -62658013 - MIR3 SINE MIR -24 184 110 29 47 0 0 chr10 82934251 82934294 -62654994 + AT_rich Low_complexity Low_complexity 1 43 0 469 284 83 23 chr10 82937988 82938218 -62651070 + MIR SINE MIR 11 260 -2 284 289 70 47 chr10 82938285 82938413 -62650875 + MIR SINE MIR 114 244 -18 180 0 0 0 chr10 82940517 82940537 -62648751 + (T)n Simple_repeat Simple_repeat 1 20 0 259 276 17 0 chr10 82941544 82941602 -62647686 + polypurine Low_complexity Low_complexity 2 60 0 273 187 13 27 chr10 82941602 82941677 -62647611 + A-rich Low_complexity Low_complexity 2 75 0 288 155 0 0 chr10 82941986 82942057 -62647231 + (TA)n Simple_repeat Simple_repeat 1 71 0 213 226 0 0 chr10 82943617 82943670 -62645618 + A-rich Low_complexity Low_complexity 4 56 0 906 181 32 27 chr10 82944926 82945114 -62644174 + MER5A DNA MER1_type 1 189 0 330 232 116 138 chr10 82945122 82945303 -62643985 + MER5B DNA MER1_type 1 177 -1 272 216 103 17 chr10 82945446 82945562 -62643726 - MER113 DNA MER1_type? -351 170 45 2029 122 21 0 chr10 82945578 82945892 -62643396 + AluSx SINE Alu 1 320 0 197 152 0 0 chr10 82947911 82947944 -62641344 - MER5B DNA MER1_type -6 172 140 351 285 109 7 chr10 82948051 82948188 -62641100 + MIR SINE MIR 101 251 -11 281 313 61 30 chr10 82949460 82949591 -62639697 + MIR3 SINE MIR 10 144 -64 583 256 130 14 chr10 82949857 82950072 -62639216 + MIR SINE MIR 13 252 -10 1743 152 10 37 chr10 82950245 82950542 -62638746 + AluSx SINE Alu 1 289 -23 3939 197 44 20 chr10 82950547 82951689 -62637599 + L1MB8 LINE L1 4404 5565 -609 1872 199 70 32 chr10 82951706 82952148 -62637140 + LTR2B LTR ERV1 32 490 0 1838 174 3 3 chr10 82952148 82952465 -62636823 + L1MB8 LINE L1 5560 5876 -308 4197 155 45 46 chr10 82952484 82953456 -62635832 - MER11C LTR ERVK -14 1057 1 970 192 23 69 chr10 82953457 82953718 -62635570 + L1MB8 LINE L1 5913 6161 -17 333 0 0 0 chr10 82953807 82953844 -62635444 + (CA)n Simple_repeat Simple_repeat 2 38 0 23 78 0 0 chr10 82955610 82955661 -62633627 + AT_rich Low_complexity Low_complexity 1 51 0 1095 199 9 31 chr10 82956240 82956466 -62632822 + MER58A DNA MER1_type 1 221 -3 232 291 94 0 chr10 82956561 82956678 -62632610 + L1ME LINE L1 5748 5875 -246 21 0 0 0 chr10 82957003 82957024 -62632264 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr10 82957264 82957287 -62632001 + AT_rich Low_complexity Low_complexity 1 23 0 475 283 129 42 chr10 82957606 82958133 -62631155 + L1ME4a LINE L1 5536 6108 -13 336 380 15 7 chr10 82959461 82959598 -62629690 + MIR SINE MIR 15 152 -110 214 205 0 0 chr10 82960800 82960839 -62628449 + (TA)n Simple_repeat Simple_repeat 1 39 0 637 240 127 23 chr10 82961691 82961912 -62627376 - MER102a DNA MER1_type -28 302 59 540 319 165 32 chr10 82962313 82962714 -62626574 + L2 LINE L2 2855 3308 -5 876 257 68 0 chr10 82962739 82962945 -62626343 - MIR SINE MIR -21 241 22 592 186 174 68 chr10 82964257 82964322 -62624966 + MER45A DNA AcHobo 1 58 -1523 1919 133 3 7 chr10 82964322 82964634 -62624654 - AluJb SINE Alu 0 311 1 592 186 174 68 chr10 82964634 82964728 -62624560 + MER45A DNA AcHobo 58 178 0 625 315 114 52 chr10 82965935 82966708 -62622580 + L2 LINE L2 2429 3246 -26 357 339 83 0 chr10 82968199 82968367 -62620921 + MIR SINE MIR 12 193 -69 265 267 35 26 chr10 82969011 82969127 -62620161 + MER103 DNA DNA 8 124 -42 616 215 172 65 chr10 82972093 82972402 -62616886 + MLT1I LTR MaLR 20 371 -38 198 0 0 0 chr10 82972402 82972424 -62616864 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 616 215 172 65 chr10 82972424 82972467 -62616821 + MLT1I LTR MaLR 371 408 -1 356 302 85 9 chr10 82972469 82972681 -62616607 + MLT1L LTR MaLR 151 378 -237 312 70 0 0 chr10 82972804 82972847 -62616441 + (CA)n Simple_repeat Simple_repeat 2 44 0 5002 107 3 21 chr10 82975289 82975688 -62613600 + L1PB1 LINE L1 5397 5777 -374 313 73 0 36 chr10 82975688 82975743 -62613545 + (CA)n Simple_repeat Simple_repeat 2 54 0 5002 107 3 21 chr10 82975743 82976091 -62613197 + L1PB1 LINE L1 5777 6130 -21 524 322 62 21 chr10 82976381 82976623 -62612665 + MIR SINE MIR 6 257 -5 351 0 0 0 chr10 82976777 82976816 -62612472 + (TG)n Simple_repeat Simple_repeat 2 40 0 288 0 0 0 chr10 82976815 82976847 -62612441 + (TA)n Simple_repeat Simple_repeat 1 32 0 * 732 227 135 9 chr10 82977093 82977322 -62611966 - MIR SINE MIR -3 259 2 548 293 24 14 chr10 82977322 82977530 -62611758 - MIR SINE MIR -25 237 28 431 273 9 9 chr10 82979002 82979112 -62610176 - MIR3 SINE MIR -39 169 60 223 114 45 0 chr10 82979917 82979961 -62609327 + (CAAAC)n Simple_repeat Simple_repeat 5 50 0 1239 72 0 0 chr10 82980099 82980251 -62609037 + AluY SINE Alu 158 309 -2 1782 162 17 7 chr10 82980496 82980617 -62608671 + AluJb SINE Alu 1 119 -193 225 0 0 0 chr10 82980617 82980642 -62608646 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 1782 162 17 7 chr10 82980642 82980810 -62608478 + AluJb SINE Alu 119 293 -19 293 196 90 30 chr10 82981024 82981157 -62608131 + L1ME4a LINE L1 5803 5943 -178 301 265 76 8 chr10 82981161 82981293 -62607995 + L1ME4a LINE L1 5980 6120 -1 229 290 45 77 chr10 82981403 82981558 -62607730 - MIR3 SINE MIR -27 181 32 577 266 93 42 chr10 82983033 82983270 -62606018 + MIR SINE MIR 14 262 0 234 305 38 29 chr10 82983307 82983412 -62605876 + MIR SINE MIR 41 146 -62 229 173 200 0 chr10 82983813 82983888 -62605400 + MIR3 SINE MIR 112 201 -7 22 35 0 0 chr10 82984288 82984317 -62604971 + AT_rich Low_complexity Low_complexity 1 29 0 291 146 0 0 chr10 82985070 82985125 -62604163 + (CA)n Simple_repeat Simple_repeat 2 56 0 626 166 185 20 chr10 82986456 82986607 -62602681 - MER5B DNA MER1_type -2 176 1 6203 151 16 31 chr10 82986611 82988120 -62601168 + L1MA9 LINE L1 4819 6308 -4 555 186 0 71 chr10 82988875 82989015 -62600273 + MER91B DNA MER1_type 1 130 -60 353 273 0 23 chr10 82989032 82989120 -62600168 + MER91B DNA MER1_type 91 176 -14 445 264 142 0 chr10 82989132 82989280 -62600008 - MIR SINE MIR -62 200 32 277 270 0 0 chr10 82990073 82990136 -62599152 - L2 LINE L2 0 3272 3210 1991 145 3 22 chr10 82990733 82991071 -62598217 - AluSx SINE Alu 0 332 1 238 119 0 0 chr10 82991084 82991126 -62598162 - Alu SINE Alu -2 301 260 479 321 44 8 chr10 82992196 82992386 -62596902 + MIR SINE MIR 11 201 -61 253 299 150 16 chr10 82993917 82994044 -62595244 - L3 LINE CR1 -129 1448 1305 405 70 0 0 chr10 82994695 82994752 -62594536 + (TG)n Simple_repeat Simple_repeat 2 58 0 217 357 45 19 chr10 82995254 82995408 -62593880 + L2 LINE L2 2600 2757 -557 440 186 136 25 chr10 82995761 82995879 -62593409 - MER3 DNA MER1_type 0 209 79 2394 97 0 0 chr10 82995910 82996219 -62593069 - AluY SINE Alu -2 309 1 214 339 62 103 chr10 82996219 82996443 -62592845 + L2 LINE L2 3023 3237 -35 1988 115 0 0 chr10 82997507 82997902 -62591386 + AluSx SINE Alu 30 424 0 189 0 0 0 chr10 82997901 82997922 -62591366 + (GGGA)n Simple_repeat Simple_repeat 4 24 0 233 214 60 34 chr10 82998274 82998391 -62590897 + (TTAG)n Simple_repeat Simple_repeat 3 122 0 * 255 259 31 19 chr10 82998355 82998517 -62590771 + (TAG)n Simple_repeat Simple_repeat 3 166 0 291 241 9 26 chr10 82998552 82998668 -62590620 + GA-rich Low_complexity Low_complexity 3 116 0 1605 131 67 131 chr10 82999217 82999434 -62589854 - MLT1A1 LTR MaLR -1 364 181 2010 105 56 7 chr10 82999434 82999719 -62589569 - AluSx SINE Alu -13 299 1 1605 131 67 131 chr10 82999719 82999889 -62589399 - MLT1A1 LTR MaLR -184 181 2 208 283 0 0 chr10 83000435 83000495 -62588793 - MER5A DNA MER1_type -80 109 50 357 292 0 46 chr10 83001046 83001176 -62588112 - MLT2E LTR ERVL -473 155 32 214 182 30 0 chr10 83002455 83002521 -62586767 + GA-rich Low_complexity Low_complexity 2 69 0 255 244 13 13 chr10 83003072 83003150 -62586138 + L1ME LINE L1 5732 5809 -312 2137 105 0 7 chr10 83004514 83004833 -62584455 + AluSq SINE Alu 1 317 0 265 182 34 23 chr10 83004852 83004940 -62584348 + (CA)n Simple_repeat Simple_repeat 2 90 0 182 167 56 0 chr10 83005213 83005249 -62584039 - L2 LINE L2 -15 3298 3261 1903 168 0 3 chr10 83005457 83005767 -62583521 - AluJb SINE Alu -3 309 1 216 184 0 0 chr10 83006035 83006073 -62583215 + (CA)n Simple_repeat Simple_repeat 1 38 0 190 139 0 28 chr10 83006914 83006950 -62582338 - L2 LINE L2 -10 3303 3269 1493 218 46 0 chr10 83007366 83007692 -62581596 + MER58B DNA MER1_type 1 341 0 181 286 120 57 chr10 83009101 83009276 -62580012 + L2 LINE L2 2984 3169 -144 284 295 98 9 chr10 83009352 83009464 -62579824 + L2 LINE L2 3186 3307 -6 2166 112 10 3 chr10 83009700 83010003 -62579285 + AluSc SINE Alu 1 305 -4 471 271 21 14 chr10 83010830 83010970 -62578318 - MIR SINE MIR -74 188 48 336 64 0 0 chr10 83011731 83011778 -62577510 + (CA)n Simple_repeat Simple_repeat 1 47 0 262 104 42 0 chr10 83012653 83012701 -62576587 - AluSc SINE Alu 0 299 250 2492 67 0 19 chr10 83014302 83014614 -62574674 + AluY SINE Alu 1 306 -5 374 349 19 19 chr10 83014779 83015037 -62574251 + L3 LINE CR1 1208 1465 -112 1938 142 27 76 chr10 83015934 83016342 -62572946 + MLT1B LTR MaLR 3 390 0 539 270 106 21 chr10 83016801 83017038 -62572250 + MIR SINE MIR 1 257 -5 294 194 0 0 chr10 83017153 83017220 -62572068 + (CTA)n Simple_repeat Simple_repeat 3 69 0 253 254 84 28 chr10 83017279 83017421 -62571867 - MIR SINE MIR -48 214 65 1878 167 7 3 chr10 83017719 83018018 -62571270 + AluJb SINE Alu 1 300 -12 292 224 0 0 chr10 83018021 83018079 -62571209 + Tigger1 DNA MER2_type 2 59 -2359 252 0 0 0 chr10 83018080 83018108 -62571180 + (T)n Simple_repeat Simple_repeat 1 28 0 1161 110 17 0 chr10 83018120 83018293 -62570995 - Tigger1 DNA MER2_type -1202 1216 1041 * 7819 110 43 0 chr10 83018287 83019426 -62569862 + Tigger1 DNA MER2_type 1231 2418 0 248 349 58 0 chr10 83020145 83020231 -62569057 + L2 LINE L2 3133 3223 -49 886 195 22 16 chr10 83020699 83020884 -62568404 + MER5A DNA MER1_type 2 187 -2 317 206 14 14 chr10 83020991 83021064 -62568224 - MER96 DNA MER1_type? 0 175 103 383 237 11 0 chr10 83023173 83023266 -62566022 + MIR SINE MIR 102 195 -67 201 348 0 0 chr10 83023461 83023530 -62565758 + L2 LINE L2 3167 3235 -78 204 179 0 0 chr10 83023610 83023649 -62565639 + L2 LINE L2 3268 3306 -7 485 198 9 0 chr10 83026688 83026804 -62562484 + GA-rich Low_complexity Low_complexity 2 118 0 183 80 0 0 chr10 83027788 83027813 -62561475 + (A)n Simple_repeat Simple_repeat 1 25 0 255 31 0 0 chr10 83029428 83029460 -62559828 + (TG)n Simple_repeat Simple_repeat 2 33 0 225 247 0 65 chr10 83030795 83030872 -62558416 - PABL_A LTR ERV1 -509 151 80 401 204 23 11 chr10 83033283 83033371 -62555917 - AluJb SINE Alu -8 294 206 1185 238 89 6 chr10 83034722 83035037 -62554251 + MER58B DNA MER1_type 1 341 0 701 178 28 122 chr10 83036330 83036543 -62552745 - MER96B DNA MER1_type? -224 193 1 374 212 153 0 chr10 83038377 83038495 -62550793 + MIR SINE MIR 91 226 -36 251 321 64 0 chr10 83039389 83039498 -62549790 + MIR3 SINE MIR 3 118 -90 183 156 0 0 chr10 83039794 83039826 -62549462 + A-rich Low_complexity Low_complexity 1 32 0 202 309 33 46 chr10 83039953 83040105 -62549183 - L2 LINE L2 -299 2973 2824 1990 151 20 0 chr10 83040916 83041215 -62548073 + AluSx SINE Alu 1 305 -7 1955 115 45 28 chr10 83041667 83041955 -62547333 - AluSx SINE Alu -19 293 1 21 0 0 0 chr10 83043381 83043402 -62545886 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr10 83043679 83043699 -62545589 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1127 225 9 0 chr10 83044871 83045093 -62544195 - MER58A DNA MER1_type 0 224 1 1031 189 0 0 chr10 83045847 83046011 -62543277 + FRAM SINE Alu 1 164 -2 211 206 63 32 chr10 83046953 83047016 -62542272 - MIR3 SINE MIR -9 199 135 195 289 72 12 chr10 83047368 83047451 -62541837 + MIR SINE MIR 70 157 -105 536 253 89 0 chr10 83047461 83047607 -62541681 - MIR SINE MIR -31 231 73 304 236 0 0 chr10 83051522 83051594 -62537694 + MIR SINE MIR 31 102 -160 183 208 14 97 chr10 83051611 83051683 -62537605 + MIR SINE MIR 80 145 -117 200 307 50 40 chr10 83057902 83058003 -62531285 + MIR SINE MIR 20 121 -87 396 0 0 0 chr10 83058324 83058368 -62530920 + (TA)n Simple_repeat Simple_repeat 2 45 0 23 0 0 0 chr10 83060775 83060798 -62528490 + AT_rich Low_complexity Low_complexity 1 23 0 360 0 0 0 chr10 83061678 83061718 -62527570 + (CA)n Simple_repeat Simple_repeat 1 40 0 222 37 0 0 chr10 83065118 83065145 -62524143 + (TA)n Simple_repeat Simple_repeat 1 27 0 421 352 139 11 chr10 83066956 83067511 -62521777 + L2 LINE L2 2636 3258 -14 250 287 37 61 chr10 83068430 83068594 -62520694 + MIR SINE MIR 78 237 -25 228 297 10 10 chr10 83070880 83070981 -62518307 + (TG)n Simple_repeat Simple_repeat 1 101 0 2826 122 18 86 chr10 83072037 83072599 -62516689 + pTR5 LTR ERV1 143 2295 -143 584 163 0 0 chr10 83072601 83072699 -62516589 - MSTD LTR MaLR -294 102 5 1763 174 10 3 chr10 83072880 83073173 -62516115 + AluJo SINE Alu 1 295 -17 474 73 29 0 chr10 83073199 83073267 -62516021 + Alu SINE Alu 3 72 -238 1184 158 20 5 chr10 83073616 83073812 -62515476 - AluSg/x SINE Alu -29 283 85 2181 122 6 3 chr10 83073982 83074293 -62514995 + AluSx SINE Alu 1 312 0 2264 123 34 29 chr10 83074293 83074676 -62514612 + Tigger1 DNA MER2_type 842 1226 -1192 415 228 48 102 chr10 83074853 83075124 -62514164 + MLT1I LTR MaLR 145 547 -2 2337 102 0 0 chr10 83075213 83075518 -62513770 - AluSx SINE Alu -7 305 1 1264 141 0 0 chr10 83075518 83075702 -62513586 - LTR26B LTR ERV1 -347 184 1 788 246 74 49 chr10 83075778 83076063 -62513225 + LTR33 LTR ERVL 38 329 -192 1615 150 12 0 chr10 83076203 83076449 -62512839 - LTR26 LTR ERV1 0 603 355 262 93 0 23 chr10 83076694 83076737 -62512551 + MIR SINE MIR 111 152 -56 25 0 0 0 chr10 83076867 83076892 -62512396 + AT_rich Low_complexity Low_complexity 1 25 0 1130 233 13 4 chr10 83077084 83077320 -62511968 - MIR SINE MIR -4 258 21 2150 143 48 44 chr10 83077422 83077592 -62511696 - L1MA8 LINE L1 0 6291 6123 2148 114 3 26 chr10 83077592 83077898 -62511390 + AluSg SINE Alu 1 299 -11 2150 143 48 44 chr10 83077898 83078161 -62511127 - L1MA8 LINE L1 -168 6123 5856 576 287 158 27 chr10 83078381 83078986 -62510302 + L2 LINE L2 2586 3272 0 387 358 46 6 chr10 83079006 83079179 -62510109 - Charlie8 DNA MER1_type -2236 181 2 711 249 11 37 chr10 83080269 83080458 -62508830 + MIR SINE MIR 59 242 -20 256 335 66 48 chr10 83080496 83080723 -62508565 + MIR SINE MIR 20 250 -12 268 287 139 0 chr10 83081247 83081348 -62507940 + MIR3 SINE MIR 87 201 -7 502 331 76 0 chr10 83083320 83083492 -62505796 + MIR SINE MIR 24 208 -54 220 260 165 16 chr10 83083791 83083918 -62505370 + MIR SINE MIR 117 262 0 211 345 0 36 chr10 83085133 83085217 -62504071 + L2 LINE L2 3191 3271 -1 219 175 0 0 chr10 83086885 83086942 -62502346 + (CA)n Simple_repeat Simple_repeat 2 58 0 189 0 0 0 chr10 83088907 83088928 -62500360 + (TA)n Simple_repeat Simple_repeat 2 22 0 391 251 130 26 chr10 83091744 83091975 -62497313 + L1ME4a LINE L1 5630 5884 -237 346 196 7 147 chr10 83092267 83092410 -62496878 - MIR SINE MIR -73 189 67 734 317 72 18 chr10 83092434 83092905 -62496383 - L2 LINE L2 -106 3207 2712 187 311 78 10 chr10 83093885 83093988 -62495300 - MIR3 SINE MIR -12 196 87 751 245 66 76 chr10 83094101 83094403 -62494885 + MER102a DNA MER1_type 31 329 -1 189 175 0 0 chr10 83096314 83096354 -62492934 + CT-rich Low_complexity Low_complexity 2 41 0 240 59 0 0 chr10 83096356 83096390 -62492898 + (CA)n Simple_repeat Simple_repeat 1 34 0 2088 126 0 7 chr10 83096870 83097172 -62492116 + AluSx SINE Alu 2 301 -11 197 312 38 76 chr10 83098135 83098292 -62490996 + L2 LINE L2 2948 3098 -174 2174 132 17 18 chr10 83098791 83099157 -62490131 + MLT2A2 LTR ERVL 1 309 -144 340 246 60 37 chr10 83100218 83100352 -62488936 - Charlie8 DNA MER1_type -2204 213 77 22 0 0 0 chr10 83101449 83101471 -62487817 + AT_rich Low_complexity Low_complexity 1 22 0 1329 192 8 12 chr10 83101490 83101735 -62487553 - AluJo SINE Alu -53 259 16 1787 155 30 0 chr10 83102787 83103090 -62486198 - AluJo SINE Alu 0 312 1 385 287 109 14 chr10 83103112 83103634 -62485654 + L1ME4a LINE L1 5504 6116 -5 2051 134 7 7 chr10 83103895 83104194 -62485094 - AluSx SINE Alu -13 299 1 3820 146 33 8 chr10 83105979 83106608 -62482680 + L1MB3 LINE L1 5537 6181 -2 1744 144 22 0 chr10 83106981 83107258 -62482030 + AluJo SINE Alu 18 300 -12 473 231 157 30 chr10 83107313 83107447 -62481841 - MIR SINE MIR -98 164 14 21 57 0 0 chr10 83110116 83110151 -62479137 + AT_rich Low_complexity Low_complexity 1 35 0 305 226 140 0 chr10 83110499 83110592 -62478696 - MER5C DNA MER1_type 0 324 219 720 143 19 0 chr10 83110594 83110699 -62478589 + FLAM_C SINE Alu 2 108 -35 225 0 0 0 chr10 83110699 83110724 -62478564 + (TAAA)n Simple_repeat Simple_repeat 3 27 0 679 220 79 28 chr10 83110724 83110938 -62478350 - MER5C DNA MER1_type -99 225 1 339 237 149 26 chr10 83111106 83111220 -62478068 + L2 LINE L2 3185 3312 -1 23 0 0 0 chr10 83111259 83111282 -62478006 + AT_rich Low_complexity Low_complexity 1 23 0 279 222 0 0 chr10 83111295 83111349 -62477939 + MER103 DNA DNA 70 123 -43 2332 80 0 13 chr10 83111355 83111654 -62477634 - AluY SINE Alu -16 295 1 349 350 8 0 chr10 83111912 83112035 -62477253 + MIR SINE MIR 139 262 0 330 296 65 28 chr10 83112109 83112217 -62477071 + L2 LINE L2 3153 3264 -8 252 77 0 0 chr10 83112865 83112904 -62476384 + (A)n Simple_repeat Simple_repeat 1 39 0 402 226 0 47 chr10 83113192 83113298 -62475990 - MER5A DNA MER1_type -80 109 9 233 309 86 53 chr10 83113327 83113479 -62475809 + L3b LINE CR1 1279 1435 -148 542 254 99 28 chr10 83114296 83114477 -62474811 + MIR SINE MIR 40 233 -29 185 204 0 93 chr10 83114472 83114526 -62474762 - MIR SINE MIR -3 259 211 * 183 162 0 0 chr10 83114605 83114642 -62474646 + (ATG)n Simple_repeat Simple_repeat 2 38 0 195 229 33 33 chr10 83116465 83116526 -62472762 - MIR SINE MIR -122 140 80 292 272 37 0 chr10 83117767 83117848 -62471440 + L1ME1 LINE L1 395 478 -5918 356 177 0 13 chr10 83118038 83118117 -62471171 + CT-rich Low_complexity Low_complexity 3 80 0 6360 234 79 34 chr10 83118586 83118689 -62470599 + L1ME1 LINE L1 775 872 -5534 2089 134 3 13 chr10 83118689 83119019 -62470269 + AluSx SINE Alu 1 312 0 6360 234 79 34 chr10 83119019 83122883 -62466405 + L1ME1 LINE L1 872 4984 -1422 1494 193 18 89 chr10 83122897 83123290 -62465998 + MLT1D-int LTR MaLR 980 1344 -27 1435 193 112 26 chr10 83123295 83123678 -62465610 + MLT1D LTR MaLR 90 505 0 493 130 22 22 chr10 83123683 83123775 -62465513 - L1ME LINE L1 -505 5661 5570 3339 210 66 24 chr10 83123776 83124684 -62464604 + L1ME1 LINE L1 5413 6350 -76 873 272 66 30 chr10 83124296 83124733 -62464555 + L1MB3 LINE L1 5955 6407 -36 * 1859 89 3 102 chr10 83125720 83126044 -62463244 + AluSx SINE Alu 1 292 -20 452 254 115 31 chr10 83127698 83127828 -62461460 - L2 LINE L2 0 3313 3173 376 184 8 0 chr10 83128131 83128203 -62461085 + L1M4 LINE L1 4507 4581 -1565 377 282 107 0 chr10 83128251 83128382 -62460906 + L1ME3A LINE L1 6021 6165 -5 2234 240 102 28 chr10 83128500 83129255 -62460033 - L2 LINE L2 -338 2976 2166 1748 187 85 59 chr10 83129619 83130079 -62459209 + MLT2B1 LTR ERVL 1 472 -48 182 321 0 0 chr10 83130473 83130526 -62458762 + L2 LINE L2 3216 3268 -4 554 347 29 16 chr10 83130627 83130869 -62458419 + MIR SINE MIR 18 262 0 405 0 0 0 chr10 83131287 83131332 -62457956 + (TG)n Simple_repeat Simple_repeat 2 46 0 198 0 0 0 chr10 83131947 83131969 -62457319 + (CAAAAA)n Simple_repeat Simple_repeat 1 22 0 1999 134 0 10 chr10 83132731 83133037 -62456251 - AluSx SINE Alu -9 303 1 776 124 16 16 chr10 83133125 83133246 -62456042 + FLAM_C SINE Alu 12 132 -11 970 174 16 21 chr10 83136581 83136771 -62452517 - MER5A DNA MER1_type 0 189 1 1763 330 50 50 chr10 83136822 83137772 -62451516 + L3 LINE CR1 626 1574 -3 210 338 42 14 chr10 83138955 83139026 -62450262 + MIR SINE MIR 33 105 -103 287 327 27 27 chr10 83141620 83141730 -62447558 + L2 LINE L2 3204 3313 0 2020 108 4 0 chr10 83141914 83142216 -62447072 + AluSp SINE Alu 6 308 0 351 0 0 0 chr10 83142290 83142329 -62446959 + (TG)n Simple_repeat Simple_repeat 1 39 0 863 192 2 14 chr10 83142574 83142741 -62446547 + MER66B LTR ERV1 1 308 -246 1545 152 86 17 chr10 83143091 83143393 -62445895 + MER66B LTR ERV1 164 486 0 430 301 41 41 chr10 83144058 83144254 -62445034 + MIR SINE MIR 21 216 -46 2265 92 0 13 chr10 83144937 83145251 -62444037 - AluSg SINE Alu 0 310 1 198 0 0 0 chr10 83146426 83146448 -62442840 + (A)n Simple_repeat Simple_repeat 1 22 0 225 0 0 0 chr10 83146451 83146476 -62442812 + (CAGGG)n Simple_repeat Simple_repeat 2 26 0 1483 183 3 30 chr10 83146476 83146771 -62442517 + AluJo SINE Alu 8 294 -18 248 261 141 0 chr10 83146811 83146903 -62442385 - MER103 DNA DNA -6 160 56 1111 171 39 10 chr10 83147007 83147212 -62442076 - MER20 DNA MER1_type -1 218 8 22 0 0 0 chr10 83148974 83148996 -62440292 + AT_rich Low_complexity Low_complexity 1 22 0 1349 174 114 129 chr10 83149836 83150364 -62438924 + MLT2B1 LTR ERVL 1 520 0 203 262 0 0 chr10 83150702 83150744 -62438544 - L2 LINE L2 -17 3296 3255 36 53 0 0 chr10 83150831 83150888 -62438400 + AT_rich Low_complexity Low_complexity 1 57 0 1656 175 20 0 chr10 83150888 83151185 -62438103 - AluSx SINE Alu -9 303 1 281 146 36 0 chr10 83151192 83151247 -62438041 - MIR SINE MIR -63 199 143 306 0 0 0 chr10 83151353 83151387 -62437901 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1424 180 4 0 chr10 83151398 83151648 -62437640 - AluJb SINE Alu -56 256 6 1013 262 47 9 chr10 83152556 83152789 -62436499 - MIR SINE MIR -2 260 19 1618 171 10 7 chr10 83157627 83157920 -62431368 - AluJo SINE Alu -14 298 5 237 256 15 98 chr10 83159239 83159372 -62429916 + L2 LINE L2 2539 2660 -654 24 0 0 0 chr10 83160618 83160642 -62428646 + AT_rich Low_complexity Low_complexity 1 24 0 301 182 0 45 chr10 83161518 83161584 -62427704 + LTR67 LTR ERVL 493 555 -2 216 211 0 0 chr10 83161660 83161698 -62427590 + polypyrimidine Low_complexity Low_complexity 3 40 0 1982 85 4 0 chr10 83162405 83162665 -62426623 + AluSp SINE Alu 50 310 -3 222 191 85 0 chr10 83165026 83165073 -62424215 + L2 LINE L2 3221 3271 -1 255 292 44 102 chr10 83165801 83165938 -62423350 + L2 LINE L2 3144 3272 0 763 257 5 32 chr10 83166925 83167112 -62422176 + MIR SINE MIR 23 204 -58 186 43 0 0 chr10 83169189 83169212 -62420076 + (GA)n Simple_repeat Simple_repeat 2 24 0 189 0 0 0 chr10 83170171 83170192 -62419096 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 422 224 102 48 chr10 83170213 83170360 -62418928 + L1ME3 LINE L1 6000 6154 -8 438 272 30 9 chr10 83175572 83175717 -62413571 - L1MC4 LINE L1 -1 8041 7785 502 290 9 32 chr10 83175755 83175972 -62413316 - L1MC4 LINE L1 -126 7916 7705 898 211 65 5 chr10 83176069 83176254 -62413034 - MER58A DNA MER1_type -26 198 3 2440 97 0 0 chr10 83176372 83176682 -62412606 - AluSx SINE Alu -2 310 1 611 219 40 13 chr10 83176738 83176889 -62412399 - L1MA9 LINE L1 -122 6190 6036 347 287 49 21 chr10 83176997 83177140 -62412148 - L1MC4a LINE L1 -549 7259 7113 206 200 0 0 chr10 83177981 83178021 -62411267 - MIR SINE MIR -52 210 171 246 241 0 0 chr10 83178241 83178295 -62410993 - MIR SINE MIR 0 262 209 275 342 89 45 chr10 83179579 83179892 -62409396 + L2 LINE L2 2508 2834 -480 227 245 75 11 chr10 83180078 83180172 -62409116 + HAL1b LINE L1 1246 1345 -3 2214 109 30 0 chr10 83180184 83180487 -62408801 + AluSx SINE Alu 1 312 0 2495 35 0 38 chr10 83185814 83186130 -62403158 + AluY SINE Alu 1 304 -7 416 258 39 0 chr10 83186141 83186269 -62403019 + HAL1b LINE L1 451 583 -765 2290 180 103 17 chr10 83186532 83187015 -62402273 - MER44D DNA MER2_type -16 589 10 2793 75 16 11 chr10 83187728 83188100 -62401188 - THE1C LTR MaLR -1 374 1 1035 273 52 34 chr10 83188135 83188714 -62400574 + L2 LINE L2 2726 3313 0 25 51 0 0 chr10 83189026 83189065 -62400223 + AT_rich Low_complexity Low_complexity 1 39 0 1346 164 24 134 chr10 83189985 83190348 -62398940 - MLT1A1 LTR MaLR -1 364 49 2072 145 0 0 chr10 83190348 83190645 -62398643 + AluSx SINE Alu 1 297 -15 1346 164 24 134 chr10 83190645 83190690 -62398598 - MLT1A1 LTR MaLR -316 49 1 183 129 0 0 chr10 83191070 83191101 -62398187 + (TG)n Simple_repeat Simple_repeat 1 31 0 376 326 75 11 chr10 83192378 83192565 -62396723 + MER113 DNA MER1_type? 313 511 -10 188 289 0 0 chr10 83194368 83194413 -62394875 + L2 LINE L2 3205 3249 -23 369 0 0 0 chr10 83194561 83194602 -62394686 + (CA)n Simple_repeat Simple_repeat 2 42 0 462 283 38 60 chr10 83197193 83197458 -62391830 + L2 LINE L2 2258 2516 -798 209 81 0 27 chr10 83197577 83197614 -62391674 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 689 212 53 111 chr10 83197887 83198242 -62391046 + MLT1A2 LTR MaLR 1 310 -86 3798 237 61 16 chr10 83200267 83201672 -62387616 - L1MDa LINE L1 -2734 3806 2335 220 256 39 48 chr10 83202658 83202745 -62386543 - MIR SINE MIR -89 119 31 1847 178 28 25 chr10 83203462 83203656 -62385632 - Tigger2a DNA MER2_type -2314 394 202 2032 136 0 31 chr10 83203656 83203973 -62385315 + AluSx SINE Alu 1 307 -5 1847 178 28 25 chr10 83203973 83204171 -62385117 - Tigger2a DNA MER2_type -2506 202 1 25 83 0 0 chr10 83205984 83206044 -62383244 + AT_rich Low_complexity Low_complexity 1 60 0 245 151 94 19 chr10 83206112 83206165 -62383123 - tRNA-Thr-ACA tRNA tRNA -13 63 7 304 244 52 51 chr10 83206964 83207107 -62382181 - L1M3 LINE L1 -556 5624 5481 180 0 0 0 chr10 83207532 83207552 -62381736 + (T)n Simple_repeat Simple_repeat 1 20 0 257 235 118 0 chr10 83207722 83207807 -62381481 + LTR16A1 LTR ERVL 159 253 -204 516 16 0 0 chr10 83208052 83208113 -62381175 + (CA)n Simple_repeat Simple_repeat 2 62 0 419 136 0 11 chr10 83208559 83208647 -62380641 + (GGAA)n Simple_repeat Simple_repeat 4 90 0 2297 98 0 25 chr10 83208683 83209000 -62380288 + AluSx SINE Alu 1 309 -3 220 220 0 0 chr10 83209386 83209436 -62379852 + T-rich Low_complexity Low_complexity 1 50 0 575 243 22 39 chr10 83209440 83209621 -62379667 - MER5B DNA MER1_type 0 178 1 326 254 239 8 chr10 83209621 83209751 -62379537 - MER58B DNA MER1_type -10 331 172 481 239 18 0 chr10 83209842 83209951 -62379337 - MER5A DNA MER1_type -72 117 7 611 206 119 6 chr10 83209966 83210126 -62379162 - MER5B DNA MER1_type 0 178 1 206 189 0 0 chr10 83210273 83210310 -62378978 + MER5B DNA MER1_type 142 178 0 21 36 0 0 chr10 83210681 83210709 -62378579 + AT_rich Low_complexity Low_complexity 1 28 0 2126 166 3 8 chr10 83211124 83211491 -62377797 + MER47A DNA MER2_type 2 366 0 390 289 28 42 chr10 83211585 83211727 -62377561 + HAL1 LINE L1 4 143 -2364 216 167 0 0 chr10 83211781 83211829 -62377459 + (TA)n Simple_repeat Simple_repeat 2 49 0 318 194 3 0 chr10 83212310 83212372 -62376916 + Alu SINE Alu 1 51 -251 977 218 65 22 chr10 83212400 83212675 -62376613 + L1ME3A LINE L1 5825 6111 -59 2498 87 0 0 chr10 83212676 83212985 -62376303 + AluSx SINE Alu 2 310 -2 365 386 24 14 chr10 83213298 83213508 -62375780 + HAL1 LINE L1 1150 1361 -1146 742 62 0 0 chr10 83213515 83213612 -62375676 - AluY SINE Alu -10 301 205 441 292 91 81 chr10 83214099 83214676 -62374612 + L1ME2 LINE L1 2037 2574 -3641 249 246 70 28 chr10 83214783 83214925 -62374363 + L1ME2 LINE L1 2746 2893 -3322 4656 150 40 32 chr10 83215483 83215709 -62373579 + L1MA8 LINE L1 4970 5193 -1098 2599 71 0 0 chr10 83215709 83216020 -62373268 + AluY SINE Alu 1 311 0 4656 150 40 32 chr10 83216020 83216936 -62372352 + L1MA8 LINE L1 5193 6124 -167 405 230 186 31 chr10 83217044 83217258 -62372030 + L1MB2 LINE L1 5512 5759 -362 1100 152 40 5 chr10 83217359 83217557 -62371731 + L1MB2 LINE L1 5960 6164 -7 25 65 0 0 chr10 83217747 83217793 -62371495 + AT_rich Low_complexity Low_complexity 1 46 0 207 211 18 35 chr10 83217821 83217878 -62371410 - MIR SINE MIR -129 79 24 1163 111 88 6 chr10 83218786 83218967 -62370321 - AluJb SINE Alu -24 288 93 198 0 0 0 chr10 83219054 83219076 -62370212 + (TTCA)n Simple_repeat Simple_repeat 1 22 0 594 234 52 19 chr10 83219269 83219423 -62369865 - FRAM SINE Alu -24 152 1 435 288 176 46 chr10 83219430 83220107 -62369181 + L2 LINE L2 2531 3291 -22 1668 208 13 24 chr10 83222279 83222662 -62366626 + MLT1A2 LTR MaLR 1 372 -2 327 371 0 15 chr10 83222880 83223012 -62366276 - L2 LINE L2 -1 3271 3142 2491 73 0 13 chr10 83223078 83223392 -62365896 + AluY SINE Alu 1 310 -1 1633 286 15 16 chr10 83223728 83224344 -62364944 + L1ME2 LINE L1 3372 3986 -2229 2925 241 46 23 chr10 83224390 83225592 -62363696 + L1ME2 LINE L1 4858 6232 -1 266 238 38 12 chr10 83225595 83225675 -62363613 + L3 LINE CR1 1407 1488 -89 378 331 66 0 chr10 83225809 83225990 -62363298 + MIR SINE MIR 50 242 -20 242 299 71 24 chr10 83226151 83226278 -62363010 + MIR SINE MIR 14 146 -116 829 251 38 4 chr10 83226789 83227024 -62362264 + MIR SINE MIR 20 262 0 2285 116 0 3 chr10 83227409 83227720 -62361568 + AluSx SINE Alu 1 310 -2 200 200 0 0 chr10 83228391 83228431 -62360857 + CT-rich Low_complexity Low_complexity 2 41 0 344 275 125 0 chr10 83228981 83229101 -62360187 - MER96 DNA MER1_type? -27 148 14 1106 249 0 4 chr10 83229609 83229834 -62359454 - MER58A DNA MER1_type 0 224 1 244 323 54 0 chr10 83231783 83231876 -62357412 + MIR SINE MIR 50 147 -61 2030 156 0 0 chr10 83232063 83232506 -62356782 - AluSc SINE Alu 0 443 1 256 288 12 12 chr10 83233095 83233175 -62356113 + L2 LINE L2 3185 3264 -8 234 0 0 0 chr10 83233261 83233287 -62356001 + (TG)n Simple_repeat Simple_repeat 2 27 0 1424 246 52 43 chr10 83233319 83233742 -62355546 - LTR16C LTR ERVL 0 491 65 450 217 66 0 chr10 83234045 83234151 -62355137 - MER103 DNA DNA -50 116 4 1760 166 36 3 chr10 83234339 83234640 -62354648 - AluJb SINE Alu -1 311 1 185 296 88 64 chr10 83234898 83234935 -62354353 + MIR SINE MIR 129 164 -98 1898 146 21 29 chr10 83234935 83235312 -62353976 + THE1C LTR MaLR 1 374 -1 185 296 88 64 chr10 83235312 83235399 -62353889 + MIR SINE MIR 164 256 -6 482 292 63 44 chr10 83235648 83235963 -62353325 - L2 LINE L2 -5 3308 2988 560 235 34 34 chr10 83236333 83236523 -62352765 - MIR SINE MIR -62 146 3 346 277 155 44 chr10 83236705 83236922 -62352366 + HAL1b LINE L1 695 887 -461 2506 84 0 3 chr10 83236922 83237232 -62352056 + AluY SINE Alu 1 309 -2 346 277 155 44 chr10 83237232 83237375 -62351913 + HAL1b LINE L1 887 1095 -253 2789 198 38 58 chr10 83237382 83238090 -62351198 + LTR8A LTR ERV1 34 727 0 1303 115 0 11 chr10 83238136 83238319 -62350969 + AluSg SINE Alu 1 181 -129 27 0 0 0 chr10 83238508 83238535 -62350753 + AT_rich Low_complexity Low_complexity 1 27 0 266 331 81 31 chr10 83240517 83240777 -62348511 + L2 LINE L2 2836 3108 -164 219 314 95 9 chr10 83241569 83241674 -62347614 + MIR SINE MIR 60 173 -89 1666 170 10 14 chr10 83242230 83242518 -62346770 - AluJo SINE Alu -22 290 4 193 243 27 54 chr10 83243963 83244037 -62345251 + L2 LINE L2 3242 3313 0 1470 230 42 12 chr10 83244082 83244412 -62344876 + MER58B DNA MER1_type 1 340 -1 294 256 56 48 chr10 83244464 83244589 -62344699 - L2 LINE L2 -5 3308 3183 232 275 0 0 chr10 83244866 83244935 -62344353 + L2 LINE L2 3203 3271 -1 251 286 102 10 chr10 83244962 83245060 -62344228 + MIR3 SINE MIR 93 199 -9 482 247 7 0 chr10 83247528 83247674 -62341614 + GA-rich Low_complexity Low_complexity 2 148 0 2370 164 20 46 chr10 83247798 83248298 -62340990 - L1MA4 LINE L1 -4 6296 5810 412 248 44 9 chr10 83248298 83248411 -62340877 + MER102b DNA MER1_type 221 337 -4 195 262 66 0 chr10 83248465 83248526 -62340762 + L2 LINE L2 3206 3270 -2 278 269 15 0 chr10 83248585 83248652 -62340636 + MER96 DNA MER1_type? 1 68 -107 1861 160 23 7 chr10 83248652 83248959 -62340329 - AluJb SINE Alu 0 312 1 199 322 15 52 chr10 83249111 83249311 -62339977 + MIR SINE MIR 5 235 -27 1868 131 105 0 chr10 83249312 83249626 -62339662 - MER7A DNA MER2_type -1 345 1 236 208 38 0 chr10 83249822 83249875 -62339413 - MER58A DNA MER1_type 0 224 170 541 152 0 0 chr10 83249902 83249981 -62339307 - MER58A DNA MER1_type 0 112 34 1714 180 48 14 chr10 83250361 83250656 -62338632 - AluJb SINE Alu -7 305 1 2087 121 6 10 chr10 83250886 83251199 -62338089 + AluSq SINE Alu 1 312 -1 1057 164 16 16 chr10 83252079 83252268 -62337020 + MER5A DNA MER1_type 1 189 0 516 32 0 0 chr10 83252357 83252419 -62336869 + (TG)n Simple_repeat Simple_repeat 2 63 0 438 316 32 7 chr10 83252480 83252635 -62336653 - MER5B DNA MER1_type -7 171 13 433 273 108 7 chr10 83252650 83252789 -62336499 - MER5A DNA MER1_type -28 161 9 1778 209 20 0 chr10 83253715 83254068 -62335220 - MLT1A1 LTR MaLR -2 362 1 632 279 11 11 chr10 83254257 83254440 -62334848 + MIR SINE MIR 1 183 -79 200 196 0 20 chr10 83254454 83254505 -62334783 + (TA)n Simple_repeat Simple_repeat 1 50 0 199 224 41 0 chr10 83255305 83255354 -62333934 - L2 LINE L2 -9 3263 3213 680 214 180 6 chr10 83255405 83255583 -62333705 + MER3 DNA MER1_type 1 209 0 244 109 43 0 chr10 83255587 83255633 -62333655 + MADE1 DNA Mariner 1 48 -32 422 231 184 0 chr10 83255651 83255798 -62333490 + MER5A DNA MER1_type 10 183 -6 501 227 58 47 chr10 83255816 83255988 -62333300 - MER5B DNA MER1_type -1 177 4 724 195 26 0 chr10 83256026 83256180 -62333108 - MER5A DNA MER1_type -31 158 1 378 273 67 6 chr10 83256231 83256396 -62332892 + MIR SINE MIR 87 261 -1 186 43 0 0 chr10 83256413 83256436 -62332852 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 320 239 0 0 chr10 83256447 83256514 -62332774 - L2 LINE L2 -35 3237 3171 321 208 38 47 chr10 83257628 83257734 -62331554 + MIR SINE MIR 50 154 -108 1322 157 54 89 chr10 83257743 83258113 -62331175 + MLT1D LTR MaLR 3 359 -146 1033 87 5 32 chr10 83258212 83258226 -62331062 + (TTCC)n Simple_repeat Simple_repeat 1 193 0 1033 87 5 32 chr10 83258226 83258411 -62330877 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 571 152 38 0 chr10 83258479 83258584 -62330704 - FLAM_A SINE Alu -1 141 33 2166 113 23 0 chr10 83259404 83259706 -62329582 + AluSq SINE Alu 1 309 -4 261 354 32 0 chr10 83260125 83260283 -62329005 - MIR SINE MIR -91 171 9 615 251 52 30 chr10 83260647 83260878 -62328410 + MIR SINE MIR 20 255 -7 408 277 23 51 chr10 83261544 83261721 -62327567 + L2 LINE L2 3126 3297 -16 301 287 112 7 chr10 83262137 83262280 -62327008 - MIR3 SINE MIR -7 201 44 320 270 92 33 chr10 83262485 83262637 -62326651 - MIR3 SINE MIR -15 193 33 222 276 17 0 chr10 83262881 83262939 -62326349 + (TA)n Simple_repeat Simple_repeat 1 59 0 397 319 47 36 chr10 83263043 83263344 -62325944 + L1ME4a LINE L1 5531 5834 -287 1264 86 0 0 chr10 83264615 83264766 -62324522 - AluSq/x SINE Alu -162 151 1 252 0 0 0 chr10 83265042 83265070 -62324218 + (CA)n Simple_repeat Simple_repeat 1 28 0 2327 106 7 0 chr10 83265195 83265497 -62323791 - AluSx SINE Alu -8 304 1 369 0 0 0 chr10 83267757 83267798 -62321490 + (TG)n Simple_repeat Simple_repeat 2 42 0 776 168 90 6 chr10 83270006 83270173 -62319115 - MER5A DNA MER1_type -1 188 8 322 295 87 27 chr10 83271277 83271426 -62317862 - MIR SINE MIR -56 206 49 380 320 0 0 chr10 83273476 83273576 -62315712 + MIR SINE MIR 50 149 -113 330 26 0 0 chr10 83276012 83276051 -62313237 + (TTG)n Simple_repeat Simple_repeat 1 39 0 2156 123 7 0 chr10 83276646 83276939 -62312349 + AluSx SINE Alu 1 295 -17 263 27 0 27 chr10 83279537 83279574 -62309714 + (TA)n Simple_repeat Simple_repeat 2 37 0 276 331 48 16 chr10 83280211 83280335 -62308953 - L2 LINE L2 -3 3269 3142 687 274 38 5 chr10 83280392 83280578 -62308710 + MIR SINE MIR 70 261 -1 2315 101 0 25 chr10 83280912 83281230 -62308058 - AluSx SINE Alu -2 310 1 282 135 101 12 chr10 83282564 83282645 -62306643 - Alu SINE Alu -254 48 1 589 259 43 56 chr10 83282706 83283030 -62306258 + L1MD2 LINE L1 6040 6359 0 215 289 0 0 chr10 83283120 83283172 -62306116 - L2 LINE L2 -4 3268 3217 513 265 48 110 chr10 83284349 83284640 -62304648 + L2 LINE L2 2985 3257 -15 2080 154 3 0 chr10 83284797 83285108 -62304180 + AluSx SINE Alu 1 312 0 3747 144 5 49 chr10 83285526 83286157 -62303131 + LTR26 LTR ERV1 1 603 0 323 200 11 22 chr10 83287351 83287441 -62301847 + MIR SINE MIR 164 252 -10 193 272 40 88 chr10 83287506 83287631 -62301657 + L2 LINE L2 2810 2928 -344 * 495 272 37 7 chr10 83287616 83287752 -62301536 + L2 LINE L2 3174 3313 0 202 194 0 0 chr10 83287770 83287806 -62301482 + GA-rich Low_complexity Low_complexity 4 39 0 22 0 0 0 chr10 83287996 83288018 -62301270 + AT_rich Low_complexity Low_complexity 1 22 0 427 297 170 9 chr10 83288296 83288508 -62300780 + MIR SINE MIR 4 249 -13 867 198 36 0 chr10 83289325 83289492 -62299796 + FRAM SINE Alu 1 172 -4 10264 200 58 6 chr10 83290588 83293563 -62295725 + L1PA16 LINE L1 3184 6162 -4 287 229 36 0 chr10 83293626 83293709 -62295579 + CT-rich Low_complexity Low_complexity 1 86 0 1152 314 187 33 chr10 83294590 83296309 -62292979 + L2 LINE L2 629 2612 -702 209 81 0 27 chr10 83296350 83296387 -62292901 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 938 190 41 107 chr10 83296661 83297018 -62292270 + MLT1A2 LTR MaLR 1 310 -86 1719 161 37 34 chr10 83297023 83297345 -62291943 + L1MB8 LINE L1 5855 6177 -1 210 279 33 0 chr10 83297345 83297406 -62291882 + GA-rich Low_complexity Low_complexity 3 65 0 574 282 12 6 chr10 83297447 83297617 -62291671 - MER104 DNA Tc2 -9 171 1 421 244 211 6 chr10 83297793 83297949 -62291339 - MIR SINE MIR -69 193 6 2070 118 38 0 chr10 83298018 83298306 -62290982 + AluSq SINE Alu 15 313 0 332 257 170 19 chr10 83299314 83299520 -62289768 + MER102a DNA MER1_type 92 328 -2 2091 128 0 0 chr10 83299655 83299968 -62289320 - AluSx SINE Alu 0 313 1 31 0 0 0 chr10 83299968 83299999 -62289289 + AT_rich Low_complexity Low_complexity 1 31 0 198 71 0 0 chr10 83300193 83300221 -62289067 + (TTG)n Simple_repeat Simple_repeat 2 29 0 1247 85 0 0 chr10 83300595 83300771 -62288517 - AluY SINE Alu 0 305 130 273 284 121 35 chr10 83300858 83300999 -62288289 - MIR SINE MIR -10 252 100 773 233 62 74 chr10 83301000 83301258 -62288030 - MIR SINE MIR 0 262 8 1834 113 0 4 chr10 83302403 83302669 -62286619 + L1MA1 LINE L1 6038 6302 0 622 250 98 27 chr10 83302853 83303077 -62286211 + MIR SINE MIR 9 248 -14 2251 103 0 7 chr10 83303929 83304229 -62285059 + AluSg SINE Alu 1 298 -12 628 338 13 9 chr10 83305660 83305885 -62283403 + MIR SINE MIR 21 246 -16 358 248 86 9 chr10 83305946 83306051 -62283237 + L2 LINE L2 3201 3313 0 182 271 71 93 chr10 83306168 83306308 -62282980 + MIR3 SINE MIR 1 137 -71 749 225 46 6 chr10 83308769 83308942 -62280346 + MIR SINE MIR 66 245 -17 2470 80 0 0 chr10 83308946 83309246 -62280042 - AluSq SINE Alu -13 300 1 180 0 0 0 chr10 83310318 83310338 -62278950 + (A)n Simple_repeat Simple_repeat 1 20 0 413 284 175 14 chr10 83310447 83310658 -62278630 - MIR SINE MIR -10 252 8 3920 165 19 15 chr10 83310761 83311440 -62277848 + L1MB5 LINE L1 5480 6161 -13 222 329 191 9 chr10 83312571 83312781 -62276507 + L2 LINE L2 2441 2688 -626 3729 202 81 8 chr10 83312784 83313868 -62275420 - L1MB8 LINE L1 0 6178 4912 1331 159 9 27 chr10 83313868 83314088 -62275200 - AluJb SINE Alu -12 300 85 679 206 8 0 chr10 83314089 83314220 -62275068 - L1MB8 LINE L1 -1227 4919 4788 596 171 45 0 chr10 83314350 83314456 -62274832 + Charlie4a DNA MER1_type 30 140 -368 2212 193 23 21 chr10 83314456 83314887 -62274401 + LTR3 LTR ERVK 1 432 0 268 114 0 0 chr10 83314894 83314929 -62274359 + HERVK3 LTR ERVK 2 36 -7207 1308 225 32 14 chr10 83314931 83315300 -62273988 + Charlie4a DNA MER1_type 133 508 0 329 211 269 57 chr10 83315301 83315476 -62273812 + L2 LINE L2 3098 3309 -4 587 292 56 30 chr10 83315610 83315843 -62273445 - MIR SINE MIR -13 249 11 1852 220 52 77 chr10 83316831 83317419 -62271869 + MER77 LTR ERV1 54 594 -11 257 306 0 12 chr10 83317573 83317658 -62271630 + MER112 DNA MER1_type 2 85 -175 716 217 0 0 chr10 83317805 83317925 -62271363 - FLAM_A SINE Alu -13 120 1 390 257 59 121 chr10 83318146 83318418 -62270870 - MIR SINE MIR 0 262 8 1206 203 34 13 chr10 83318449 83318686 -62270602 - AluJo SINE Alu -22 290 49 905 232 108 16 chr10 83321519 83321825 -62267463 + MER102b DNA MER1_type 2 335 -6 377 219 29 38 chr10 83322198 83322303 -62266985 - ORSL DNA AcHobo -1 274 171 1637 168 16 33 chr10 83322343 83322646 -62266642 + AluJo SINE Alu 1 298 -14 901 204 0 0 chr10 83322649 83322828 -62266460 + AluJo/FRAM SINE Alu 137 315 0 508 219 19 0 chr10 83322841 83322946 -62266342 - ORSL DNA AcHobo -157 118 12 206 289 0 0 chr10 83323689 83323734 -62265554 + L2 LINE L2 3205 3249 -23 369 0 0 0 chr10 83323882 83323923 -62265365 + (CA)n Simple_repeat Simple_repeat 2 42 0 273 283 43 11 chr10 83325129 83325221 -62264067 + MIR SINE MIR 30 124 -84 525 262 92 61 chr10 83327178 83327407 -62261881 + MIR SINE MIR 21 256 -6 26 0 0 0 chr10 83330460 83330486 -62258802 + AT_rich Low_complexity Low_complexity 1 26 0 892 198 31 22 chr10 83332641 83332863 -62256425 - L1MB8 LINE L1 -3 6175 5952 309 155 0 0 chr10 83333508 83333566 -62255722 + (TG)n Simple_repeat Simple_repeat 1 58 0 2231 111 0 3 chr10 83335208 83335505 -62253783 - AluSx SINE Alu -15 297 2 1932 167 3 3 chr10 83336301 83336612 -62252676 + AluSx SINE Alu 1 311 -1 2364 93 0 3 chr10 83336615 83336915 -62252373 + AluSg SINE Alu 1 299 -11 212 256 26 90 chr10 83337302 83337458 -62251830 + MER5B DNA MER1_type 17 162 -16 1600 163 0 22 chr10 83337839 83338115 -62251173 + AluJo SINE Alu 35 304 -8 2741 82 5 14 chr10 83338584 83338951 -62250337 + THE1B LTR MaLR 1 364 0 491 288 39 13 chr10 83338967 83339120 -62250168 + MIR3 SINE MIR 7 163 -45 2233 118 0 0 chr10 83339664 83339953 -62249335 + AluSx SINE Alu 1 289 -23 209 269 30 15 chr10 83340486 83340553 -62248735 + L2 LINE L2 2778 2845 -469 231 319 151 17 chr10 83340816 83340935 -62248353 + L2 LINE L2 3138 3272 0 2034 137 0 0 chr10 83341410 83341725 -62247563 + AluSx SINE Alu 1 315 0 2218 163 36 15 chr10 83343064 83343476 -62245812 + L1MB3 LINE L1 5651 6071 -112 2257 146 62 41 chr10 83343476 83343893 -62245395 + MSTB LTR MaLR 1 426 0 557 120 90 0 chr10 83343893 83343993 -62245295 + L1MB4 LINE L1 6066 6174 -6 2237 125 0 0 chr10 83346040 83346337 -62242951 - AluSx SINE Alu -15 297 1 482 122 14 0 chr10 83346337 83346411 -62242877 - MER5A DNA MER1_type -114 75 1 261 0 0 0 chr10 83346742 83346771 -62242517 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2039 142 7 0 chr10 83346784 83347079 -62242209 + AluSq SINE Alu 1 297 -16 512 228 7 47 chr10 83347824 83347973 -62241315 - L2 LINE L2 0 3313 3171 279 283 189 0 chr10 83348309 83348415 -62240873 - MIR SINE MIR -62 146 21 340 304 70 0 chr10 83348769 83348884 -62240404 + L3 LINE CR1 1384 1506 -71 393 221 32 11 chr10 83348993 83349088 -62240200 - MER94 DNA DNA -35 99 3 192 143 0 0 chr10 83349295 83349337 -62239951 + (CA)n Simple_repeat Simple_repeat 2 43 0 181 377 0 0 chr10 83350326 83350395 -62238893 - MER5A DNA MER1_type -71 118 50 501 173 14 122 chr10 83350483 83350622 -62238666 + MER5B DNA MER1_type 42 165 -13 233 130 43 0 chr10 83351455 83351501 -62237787 + T-rich Low_complexity Low_complexity 5 52 0 1350 155 136 15 chr10 83351512 83351776 -62237512 - AluSg1 SINE Alu -13 296 1 684 175 32 48 chr10 83351815 83352004 -62237284 - Charlie5 DNA MER1_type 0 2624 2439 * 1029 207 18 47 chr10 83351999 83352302 -62236986 - Charlie5 DNA MER1_type -2491 121 1 410 274 67 18 chr10 83352451 83352615 -62236673 + MIR SINE MIR 71 242 -20 467 273 23 118 chr10 83352944 83353292 -62235996 + L2 LINE L2 2999 3313 0 183 184 0 0 chr10 83353621 83353659 -62235629 + (TA)n Simple_repeat Simple_repeat 2 39 0 252 306 0 0 chr10 83354169 83354241 -62235047 + CT-rich Low_complexity Low_complexity 4 75 0 388 284 55 8 chr10 83354759 83354886 -62234402 - L2 LINE L2 -1 3312 3180 313 319 57 7 chr10 83356383 83356524 -62232764 - MIR3 SINE MIR -7 201 54 309 239 202 0 chr10 83357415 83357524 -62231764 + MIR3 SINE MIR 14 144 -64 21 57 0 0 chr10 83357764 83357799 -62231489 + AT_rich Low_complexity Low_complexity 1 35 0 759 234 0 22 chr10 83357818 83358002 -62231286 - MIR SINE MIR -27 235 56 482 213 43 21 chr10 83358649 83358790 -62230498 + L2 LINE L2 2517 2660 -654 184 341 34 11 chr10 83360526 83360614 -62228674 - MIR SINE MIR -92 116 27 2425 126 31 8 chr10 83360629 83360985 -62228303 + THE1B LTR MaLR 1 364 0 1426 169 84 58 chr10 83361206 83361490 -62227798 + LTR37A LTR ERV1 1 301 -125 1733 154 9 52 chr10 83361490 83361815 -62227473 - AluJb SINE Alu -1 311 1 1426 169 84 58 chr10 83361815 83361945 -62227343 + LTR37A LTR ERV1 301 426 0 584 319 11 22 chr10 83362249 83362434 -62226854 - MER91A DNA MER1_type -13 183 1 845 192 0 79 chr10 83362687 83362901 -62226387 + L1MB8 LINE L1 5809 6005 -173 555 176 118 0 chr10 83363729 83363848 -62225440 + FLAM_A SINE Alu 1 133 0 208 316 38 30 chr10 83364991 83365124 -62224164 - L2 LINE L2 -290 2982 2849 192 77 0 0 chr10 83365488 83365514 -62223774 + (TTA)n Simple_repeat Simple_repeat 2 27 0 2143 112 0 0 chr10 83365519 83365796 -62223492 - AluSx SINE Alu -31 281 5 647 273 23 27 chr10 83366681 83366901 -62222387 + MIR SINE MIR 6 224 -38 838 282 107 15 chr10 83367081 83367492 -62221796 + MER113 DNA MER1_type? 63 511 -10 771 258 10 0 chr10 83369491 83369685 -62219603 - MIR SINE MIR -54 208 13 755 253 132 26 chr10 83370905 83371170 -62218118 + L1ME1 LINE L1 5874 6166 0 217 215 169 15 chr10 83373303 83373368 -62215920 - L2 LINE L2 0 3313 3239 434 256 50 56 chr10 83373386 83373566 -62215722 + LTR33A LTR ERVL 9 187 -336 515 299 116 35 chr10 83373774 83374145 -62215143 - L2 LINE L2 -71 3242 2842 181 265 20 0 chr10 83374179 83374228 -62215060 - L2 LINE L2 -595 2719 2670 493 305 8 58 chr10 83375440 83375623 -62213665 + L1MC/D LINE L1 5566 5734 -2074 2233 120 0 0 chr10 83375623 83375922 -62213366 + AluSx SINE Alu 1 299 -13 493 305 8 58 chr10 83375922 83375997 -62213291 + L1MC/D LINE L1 5734 5811 -1997 2218 109 3 0 chr10 83376052 83376346 -62212942 + AluSq SINE Alu 1 295 -18 2930 19 0 0 chr10 83376486 83376804 -62212484 + AluYb8 SINE Alu 1 318 0 2494 157 75 4 chr10 83377009 83377479 -62211809 + MLT1D LTR MaLR 1 503 -2 196 295 70 103 chr10 83379195 83379225 -62210063 + MER5B DNA MER1_type 20 49 -129 2141 124 3 0 chr10 83379225 83379524 -62209764 - AluSq SINE Alu -9 304 5 196 295 70 103 chr10 83379524 83379649 -62209639 + MER5B DNA MER1_type 49 170 -8 303 283 233 13 chr10 83380996 83381155 -62208133 - MER91A DNA MER1_type -2 194 1 570 268 24 77 chr10 83381282 83381450 -62207838 + MIR SINE MIR 53 211 -51 471 260 178 0 chr10 83381864 83382010 -62207278 - MER5B DNA MER1_type -1 177 6 299 281 68 48 chr10 83383026 83383172 -62206116 - MIR3 SINE MIR -26 182 34 1712 216 90 74 chr10 83383365 83383990 -62205298 - LTR27 LTR ERV1 0 636 2 676 239 102 0 chr10 83383990 83384166 -62205122 + MIR SINE MIR 49 242 -20 387 204 68 11 chr10 83384672 83384760 -62204528 + MER5A DNA MER1_type 14 106 -83 303 279 0 0 chr10 83384750 83384818 -62204470 - MIR SINE MIR -194 68 1 * 476 196 229 13 chr10 83385937 83386090 -62203198 - MER5A DNA MER1_type -1 188 3 475 318 91 0 chr10 83386096 83386250 -62203038 - MIR3 SINE MIR -40 168 1 227 312 71 71 chr10 83386305 83386475 -62202813 - MIR SINE MIR -45 217 48 342 282 68 114 chr10 83387107 83387458 -62201830 - L2 LINE L2 -10 3262 2928 426 351 22 40 chr10 83387533 83387758 -62201530 - L2 LINE L2 -515 2799 2579 1964 171 40 8 chr10 83388283 83388552 -62200736 + MER47A DNA MER2_type 4 288 -2035 2173 64 0 11 chr10 83388552 83388835 -62200453 - AluY SINE Alu -31 280 1 1964 171 40 8 chr10 83388835 83388916 -62200372 + MER47A DNA MER2_type 288 365 -1 258 266 69 51 chr10 83389871 83389985 -62199303 - MIR SINE MIR -89 119 1 320 319 118 0 chr10 83390740 83390884 -62198404 + MIR3 SINE MIR 14 174 -34 278 303 211 29 chr10 83391389 83391610 -62197678 - MIR SINE MIR -7 255 11 184 376 255 7 chr10 83391685 83391826 -62197462 + L3b LINE CR1 1393 1568 -15 200 294 15 29 chr10 83392512 83392580 -62196708 + MIR SINE MIR 74 141 -67 183 288 15 45 chr10 83392621 83392687 -62196601 + MIR3 SINE MIR 144 207 -1 2027 136 0 0 chr10 83393330 83393625 -62195663 + AluSx SINE Alu 1 295 -17 343 256 64 0 chr10 83394640 83394718 -62194570 + L2 LINE L2 3159 3241 -31 422 248 10 10 chr10 83394908 83395009 -62194279 - MER112 DNA MER1_type -8 252 152 250 360 0 0 chr10 83395412 83395498 -62193790 - L3 LINE CR1 -266 1311 1226 186 303 61 15 chr10 83395686 83395752 -62193536 - L3 LINE CR1 -1238 339 271 659 258 133 21 chr10 83395826 83395910 -62193378 + MER112 DNA MER1_type 2 75 -185 396 0 0 0 chr10 83395910 83395954 -62193334 + (CA)n Simple_repeat Simple_repeat 2 45 0 659 258 133 21 chr10 83395954 83396102 -62193186 + MER112 DNA MER1_type 75 260 0 358 348 54 0 chr10 83396876 83396988 -62192300 + L2 LINE L2 3150 3267 -5 539 215 215 0 chr10 83397447 83397596 -62191692 - MER5A DNA MER1_type -8 181 1 407 381 59 4 chr10 83397596 83397832 -62191456 + MIR SINE MIR 4 252 -10 427 252 56 19 chr10 83397891 83397998 -62191290 + MIR3 SINE MIR 45 155 -53 405 308 104 23 chr10 83399175 83399396 -62189892 - MIR SINE MIR 0 262 24 280 306 0 0 chr10 83399557 83399629 -62189659 + L2 LINE L2 3201 3272 0 237 218 70 106 chr10 83399965 83400107 -62189181 - L2 LINE L2 -1 3312 3176 936 241 67 79 chr10 83400549 83400955 -62188333 + MLT1I LTR MaLR 8 408 -1 22 0 0 0 chr10 83402565 83402587 -62186701 + AT_rich Low_complexity Low_complexity 1 22 0 487 270 114 46 chr10 83402911 83403218 -62186070 - MLT1J2 LTR MaLR 0 450 123 319 300 169 6 chr10 83405246 83405406 -62183882 + MIR SINE MIR 59 244 -18 481 196 179 0 chr10 83405562 83405674 -62183614 - FLAM_A SINE Alu -1 132 1 288 0 0 0 chr10 83405927 83405959 -62183329 + (TC)n Simple_repeat Simple_repeat 2 33 0 * 369 0 0 0 chr10 83405958 83405999 -62183289 + (TG)n Simple_repeat Simple_repeat 2 42 0 185 289 124 45 chr10 83406750 83406951 -62182337 + L2 LINE L2 2651 2867 -447 264 285 152 7 chr10 83407323 83407474 -62181814 + MIR SINE MIR 72 244 -18 216 0 0 0 chr10 83407503 83407527 -62181761 + (TGG)n Simple_repeat Simple_repeat 3 26 0 240 239 22 98 chr10 83407779 83407871 -62181417 + MIR3 SINE MIR 105 189 -19 1997 119 0 11 chr10 83408317 83408641 -62180647 - AluSx SINE Alu 0 321 1 339 241 58 11 chr10 83408795 83408882 -62180406 + MIR SINE MIR 57 147 -115 439 266 130 33 chr10 83409033 83409217 -62180071 + MIR SINE MIR 60 261 -1 2275 100 0 0 chr10 83409816 83410126 -62179162 - AluY SINE Alu -1 310 1 1701 217 37 8 chr10 83410252 83410607 -62178681 + MLT1A1 LTR MaLR 1 365 0 704 261 19 37 chr10 83410760 83410975 -62178313 + MIR SINE MIR 51 261 -1 414 295 40 34 chr10 83411560 83411709 -62177579 - MIR SINE MIR -66 196 47 379 297 101 0 chr10 83411787 83411935 -62177353 + MIR SINE MIR 71 233 -29 1448 165 50 39 chr10 83412522 83412801 -62176487 + AluJb SINE Alu 1 282 -30 361 322 186 8 chr10 83412975 83413233 -62176055 - L2 LINE L2 0 3272 2969 590 122 148 17 chr10 83414247 83414455 -62174833 + FLAM_C SINE Alu 13 235 0 377 324 68 24 chr10 83415043 83415250 -62174038 + L2 LINE L2 3083 3298 -15 222 347 24 65 chr10 83415522 83415692 -62173596 - L2 LINE L2 -2 3270 3108 1024 168 98 30 chr10 83415709 83416006 -62173282 - MER33 DNA MER1_type 0 324 8 243 254 30 0 chr10 83416097 83416164 -62173124 + CT-rich Low_complexity Low_complexity 3 71 0 605 226 22 44 chr10 83416416 83416597 -62172691 - MER5B DNA MER1_type -1 177 1 659 313 16 10 chr10 83416680 83416872 -62172416 - MIR SINE MIR -53 209 17 186 208 0 0 chr10 83417418 83417466 -62171822 + A-rich Low_complexity Low_complexity 1 48 0 216 217 43 0 chr10 83417791 83417837 -62171451 + MIR SINE MIR 107 154 -108 247 208 0 75 chr10 83418130 83418183 -62171105 + L2 LINE L2 3252 3300 -13 1912 119 6 44 chr10 83418312 83418630 -62170658 + AluSx SINE Alu 1 306 -6 863 292 91 24 chr10 83418671 83419054 -62170234 + MLT1I LTR MaLR 1 409 0 201 400 33 8 chr10 83419738 83419858 -62169430 + MIR SINE MIR 129 251 -11 560 200 69 52 chr10 83419964 83420171 -62169117 + MER106B DNA MER1_type 1 1044 -15 6477 37 2 10 chr10 83421081 83421867 -62167421 + L1PA5 LINE L1 5375 6154 0 780 299 56 8 chr10 83422040 83422274 -62167014 + MIR SINE MIR 16 260 -2 215 305 19 9 chr10 83422355 83422460 -62166828 + CT-rich Low_complexity Low_complexity 1 106 0 461 338 99 5 chr10 83422996 83423197 -62166091 - MIR SINE MIR 0 262 43 649 240 33 0 chr10 83423265 83423415 -62165873 - MIR SINE MIR -21 241 87 732 261 98 14 chr10 83424226 83424442 -62164846 - MIR SINE MIR -22 240 14 363 306 137 35 chr10 83424518 83424773 -62164515 - L2 LINE L2 0 3313 3033 293 290 51 43 chr10 83425726 83425864 -62163424 + L2 LINE L2 3118 3256 -57 637 221 44 61 chr10 83425919 83426100 -62163188 - MIR SINE MIR -64 198 21 298 220 0 0 chr10 83426795 83426854 -62162434 + L2 LINE L2 3255 3313 0 648 268 66 6 chr10 83427991 83428174 -62161114 + MIR SINE MIR 37 230 -32 468 358 29 0 chr10 83428185 83428389 -62160899 - MIR SINE MIR -6 256 47 251 289 162 21 chr10 83428518 83428660 -62160628 + MIR SINE MIR 27 188 -74 761 227 61 15 chr10 83428795 83428993 -62160295 - MIR SINE MIR 0 262 56 272 306 46 0 chr10 83429097 83429205 -62160083 + MER103 DNA DNA 31 143 -23 2224 159 14 14 chr10 83430061 83430426 -62158862 + MLT1A1 LTR MaLR 1 365 0 2042 118 0 16 chr10 83430880 83431185 -62158103 - AluSx SINE Alu -12 300 1 879 195 97 5 chr10 83433388 83433573 -62155715 + MER3 DNA MER1_type 5 206 -3 345 24 0 0 chr10 83433608 83433650 -62155638 + (TG)n Simple_repeat Simple_repeat 2 43 0 292 240 183 0 chr10 83434422 83434526 -62154762 - MIR SINE MIR 0 262 140 367 241 23 0 chr10 83434632 83434719 -62154569 - MIR SINE MIR -75 187 99 361 262 12 12 chr10 83434862 83434946 -62154342 - MIR SINE MIR -177 85 2 1733 85 0 50 chr10 83434988 83435247 -62154041 - AluSc SINE Alu -32 277 32 2431 110 8 11 chr10 83435934 83436290 -62152998 + THE1A LTR MaLR 1 355 0 888 269 34 59 chr10 83436387 83436796 -62152492 + MLT1K LTR MaLR 189 587 -1 319 264 75 19 chr10 83437180 83437286 -62152002 + MIR SINE MIR 80 191 -71 1149 269 70 102 chr10 83437670 83438268 -62151020 + MLT1K LTR MaLR 2 580 -8 22 0 0 0 chr10 83438609 83438631 -62150657 + AT_rich Low_complexity Low_complexity 1 22 0 487 198 0 0 chr10 83440822 83440903 -62148385 + L2 LINE L2 3232 3312 -1 456 284 69 27 chr10 83441987 83442210 -62147078 + MIR SINE MIR 24 262 0 219 114 0 0 chr10 83442218 83442253 -62147035 + (CAT)n Simple_repeat Simple_repeat 2 36 0 225 0 0 0 chr10 83443351 83443376 -62145912 + (CA)n Simple_repeat Simple_repeat 1 25 0 363 349 156 6 chr10 83443394 83443595 -62145693 + MIR SINE MIR 20 251 -11 24 0 0 0 chr10 83444103 83444127 -62145161 + AT_rich Low_complexity Low_complexity 1 24 0 510 332 139 15 chr10 83444526 83445060 -62144228 + L2 LINE L2 2708 3310 -3 2173 131 0 0 chr10 83445165 83445477 -62143811 + AluSx SINE Alu 1 312 0 317 320 88 8 chr10 83445545 83445670 -62143618 - MIR SINE MIR -108 154 20 194 294 0 0 chr10 83446876 83446927 -62142361 + MIR SINE MIR 103 153 -109 2021 144 0 0 chr10 83447100 83447477 -62141811 - AluSq SINE Alu 0 377 1 194 238 16 24 chr10 83447569 83447695 -62141593 + (ATGGTG)n Simple_repeat Simple_repeat 3 127 0 371 229 24 12 chr10 83448461 83448544 -62140744 + MER5A DNA MER1_type 29 112 -77 3279 239 27 21 chr10 83448567 83450216 -62139072 - L1ME1 LINE L1 -17 6149 4489 236 333 0 0 chr10 83450218 83450278 -62139010 + MER5A DNA MER1_type 128 187 -2 507 291 26 7 chr10 83450296 83450447 -62138841 + MER5B DNA MER1_type 24 177 -1 189 270 0 0 chr10 83450527 83450564 -62138724 - MER5B DNA MER1_type -6 172 136 188 276 172 11 chr10 83451866 83451953 -62137335 + MIR SINE MIR 159 259 -3 198 196 43 22 chr10 83451958 83452004 -62137284 - MIR3 SINE MIR -153 55 9 555 233 165 21 chr10 83452476 83452712 -62136576 + MER102a DNA MER1_type 61 330 0 243 268 0 49 chr10 83453294 83453376 -62135912 + L2 LINE L2 3190 3267 -5 186 261 65 0 chr10 83453724 83453770 -62135518 - MIR SINE MIR -98 164 116 1422 151 91 87 chr10 83453882 83454298 -62134990 + LTR37B LTR ERV1 51 468 0 292 235 61 31 chr10 83454298 83454396 -62134892 + MIR3 SINE MIR 61 161 -47 300 338 61 14 chr10 83456308 83456456 -62132832 + MIR SINE MIR 20 174 -88 664 266 190 22 chr10 83456663 83457027 -62132261 + LTR16A LTR ERVL 24 448 -2 26 30 0 0 chr10 83457631 83457664 -62131624 + AT_rich Low_complexity Low_complexity 1 33 0 2147 107 0 0 chr10 83457666 83457951 -62131337 + AluSx SINE Alu 1 286 -22 465 34 0 0 chr10 83457951 83458010 -62131278 + (CATA)n Simple_repeat Simple_repeat 2 60 0 564 289 27 11 chr10 83458789 83458976 -62130312 + MIR SINE MIR 70 259 -3 264 167 77 77 chr10 83459585 83459680 -62129608 + MIR SINE MIR 50 145 -63 218 224 12 35 chr10 83460457 83460542 -62128746 + GA-rich Low_complexity Low_complexity 2 84 0 327 277 13 90 chr10 83460933 83461088 -62128200 + MIR SINE MIR 120 262 0 188 254 18 18 chr10 83461672 83461727 -62127561 + L2 LINE L2 3240 3294 -19 507 260 100 76 chr10 83462138 83462388 -62126900 - L2 LINE L2 0 3313 3058 347 311 38 15 chr10 83462451 83462583 -62126705 + MIR3 SINE MIR 67 201 -7 730 205 137 0 chr10 83463299 83463460 -62125828 - MIR SINE MIR -15 247 65 323 209 0 0 chr10 83463475 83463542 -62125746 - Charlie5 DNA MER1_type -27 2585 2519 2323 100 0 0 chr10 83463605 83463914 -62125374 + AluSq SINE Alu 1 309 -4 340 246 0 94 chr10 83463914 83464031 -62125257 + L1MC4 LINE L1 6610 6703 -1339 517 272 96 38 chr10 83464124 83464363 -62124925 + MLT1L LTR MaLR 14 266 -349 688 159 16 0 chr10 83464435 83464561 -62124727 - L1MB3 LINE L1 0 6183 6056 445 131 123 8 chr10 83464573 83464703 -62124585 - Charlie5 DNA MER1_type -58 2554 2410 790 120 106 21 chr10 83464720 83464862 -62124426 - FRAM SINE Alu -23 153 1 227 200 0 0 chr10 83465837 83465882 -62123406 + (TTCA)n Simple_repeat Simple_repeat 2 46 0 392 319 0 10 chr10 83465927 83466043 -62123245 + MIR SINE MIR 37 149 -62 694 251 192 6 chr10 83466370 83466586 -62122702 - MIR SINE MIR -7 255 3 182 415 96 0 chr10 83466702 83466984 -62122304 - L2 LINE L2 -443 2871 2563 1907 142 0 0 chr10 83468532 83468917 -62120371 - AluSx SINE Alu 0 385 1 295 366 75 11 chr10 83470797 83470983 -62118305 - L2 LINE L2 -436 2878 2681 395 264 40 47 chr10 83471123 83471271 -62118017 - MIR3 SINE MIR -24 184 38 219 103 0 0 chr10 83472612 83472651 -62116637 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 649 120 4 58 chr10 83473092 83473334 -62115954 + (GGGA)n Simple_repeat Simple_repeat 1 229 0 246 250 26 26 chr10 83473585 83473661 -62115627 + L2 LINE L2 3196 3271 -1 731 220 148 31 chr10 83474393 83474616 -62114672 - MIR SINE MIR 0 262 14 1369 196 51 36 chr10 83475810 83476061 -62113227 - MER58B DNA MER1_type -2079 341 82 1690 181 0 10 chr10 83476061 83476365 -62112923 + AluJo SINE Alu 1 301 -11 1369 196 51 36 chr10 83476365 83476449 -62112839 - MER58B DNA MER1_type -2338 82 1 385 227 42 25 chr10 83476514 83476633 -62112655 + MER103 DNA DNA 3 123 -43 291 318 11 0 chr10 83476752 83476840 -62112448 - L3 LINE CR1 -84 1493 1405 228 35 0 0 chr10 83477315 83477344 -62111944 + (CAGAGA)n Simple_repeat Simple_repeat 2 30 0 224 294 43 54 chr10 83478199 83478291 -62110997 + MIR3 SINE MIR 69 159 -49 274 219 0 123 chr10 83478293 83478343 -62110945 + MER58A DNA MER1_type 4 44 -297 1301 122 82 28 chr10 83478343 83478598 -62110690 - L1MA4 LINE L1 0 6300 6032 274 219 0 123 chr10 83478598 83478620 -62110668 + MER58A DNA MER1_type 44 67 -157 5085 129 18 58 chr10 83478620 83479035 -62110253 - L1PB4 LINE L1 -7 6149 5719 321 89 0 0 chr10 83479035 83479080 -62110208 + (TG)n Simple_repeat Simple_repeat 2 46 0 5085 129 18 58 chr10 83479080 83479638 -62109650 - L1PB4 LINE L1 -437 5719 5215 650 211 125 0 chr10 83479638 83479790 -62109498 + MER58A DNA MER1_type 51 221 -3 323 244 64 0 chr10 83480776 83480854 -62108434 + L2 LINE L2 3225 3307 -6 372 266 40 40 chr10 83481559 83481683 -62107605 + MIR SINE MIR 18 141 -67 189 239 65 0 chr10 83481802 83481848 -62107440 + MIR SINE MIR 198 246 -16 2306 83 3 27 chr10 83482155 83482456 -62106832 - AluY SINE Alu -17 294 1 617 202 9 0 chr10 83484000 83484109 -62105179 - MER81 DNA DNA 0 114 5 1963 91 8 4 chr10 83485264 83485549 -62103739 - AluSx SINE Alu 0 316 31 586 271 129 12 chr10 83485654 83486050 -62103238 + MLT1K LTR MaLR 10 533 -55 788 265 226 3 chr10 83486119 83486428 -62102860 + L2 LINE L2 2934 3311 -2 810 143 65 7 chr10 83486482 83486636 -62102652 + MER53 DNA DNA 3 165 -24 384 201 275 20 chr10 83487458 83487607 -62101681 - MER5A DNA MER1_type 0 189 3 312 319 30 22 chr10 83488436 83488571 -62100717 - MIR SINE MIR -8 254 119 242 275 197 26 chr10 83488593 83488786 -62100502 + MIR SINE MIR 9 234 -28 249 351 9 0 chr10 83489008 83489119 -62100169 + L3 LINE CR1 1446 1557 -20 218 213 21 0 chr10 83489126 83489173 -62100115 - MIR3 SINE MIR -51 157 110 564 240 0 0 chr10 83489396 83489575 -62099713 + (TG)n Simple_repeat Simple_repeat 2 180 0 253 220 30 126 chr10 83490256 83490452 -62098836 - MIR3 SINE MIR 0 208 35 553 283 127 20 chr10 83491557 83491887 -62097401 + L2 LINE L2 2688 3064 -249 1419 132 5 5 chr10 83491999 83492212 -62097076 - AluSg/x SINE Alu -3 309 97 201 196 0 0 chr10 83492285 83492331 -62096957 + GA-rich Low_complexity Low_complexity 1 46 0 269 241 330 0 chr10 83492445 83492557 -62096731 - MIR SINE MIR -82 180 32 249 238 61 0 chr10 83493526 83493602 -62095686 + MIR SINE MIR 69 149 -59 2172 116 0 3 chr10 83493846 83494164 -62095124 - AluSx SINE Alu 0 317 1 256 235 82 41 chr10 83495088 83495186 -62094102 + MIR3 SINE MIR 86 187 -21 227 222 191 56 chr10 83495198 83495324 -62093964 + MIR3 SINE MIR 43 185 -23 447 275 128 41 chr10 83495407 83495485 -62093803 - MIR SINE MIR -25 237 167 2216 123 7 0 chr10 83495485 83495795 -62093493 - AluSx SINE Alu 0 312 1 447 275 128 41 chr10 83495795 83495934 -62093354 - MIR SINE MIR -95 167 1 182 302 0 0 chr10 83497081 83497124 -62092164 - MIR3 SINE MIR -50 158 116 250 301 55 0 chr10 83497724 83497797 -62091491 + L2 LINE L2 3210 3286 -27 207 0 0 0 chr10 83500424 83500447 -62088841 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 204 284 159 23 chr10 83500883 83500971 -62088317 - L2 LINE L2 -2301 1013 914 206 352 80 0 chr10 83501360 83501448 -62087840 + L2 LINE L2 2976 3070 -202 184 319 0 72 chr10 83501600 83501669 -62087619 + L2 LINE L2 3189 3252 -20 409 303 97 48 chr10 83501806 83502293 -62086995 + L2 LINE L2 2543 3055 -217 1803 192 24 3 chr10 83502431 83502764 -62086524 - MER58B DNA MER1_type -1 340 1 263 376 83 0 chr10 83502764 83502873 -62086415 + L2 LINE L2 3148 3265 -7 230 300 0 57 chr10 83502982 83503122 -62086166 - MER103 DNA DNA -34 132 1 765 227 38 22 chr10 83503210 83503395 -62085893 - MER5A DNA MER1_type -1 188 1 1487 214 92 12 chr10 83503544 83503970 -62085318 + MLT1C LTR MaLR 1 460 -7 215 340 38 9 chr10 83505140 83505246 -62084042 + MIR SINE MIR 95 203 -59 391 319 151 0 chr10 83505265 83505431 -62083857 - MIR SINE MIR -13 249 59 324 0 0 0 chr10 83505502 83505538 -62083750 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 235 346 63 44 chr10 83505591 83505796 -62083492 - L2 LINE L2 -78 3194 2986 290 326 72 22 chr10 83505910 83506048 -62083240 + L2 LINE L2 3122 3266 -6 924 59 0 0 chr10 83506048 83506167 -62083121 + (TGGA)n Simple_repeat Simple_repeat 4 122 0 212 239 230 35 chr10 83507091 83507204 -62082084 + MIR SINE MIR 125 259 -3 966 260 22 0 chr10 83507325 83507556 -62081732 - MIR SINE MIR -4 258 23 659 209 136 5 chr10 83507866 83508057 -62081231 + MER112 DNA MER1_type 6 221 -39 407 268 46 46 chr10 83508338 83508491 -62080797 + MIR SINE MIR 48 200 -62 2257 85 0 14 chr10 83508724 83509054 -62080234 - AluSc SINE Alu 0 326 1 223 216 83 95 chr10 83509124 83509278 -62080010 - MIR3 SINE MIR -43 165 51 1077 172 13 48 chr10 83510265 83510492 -62078796 - MER20 DNA MER1_type 0 219 1 545 224 41 34 chr10 83510564 83510711 -62078577 - MER103 DNA DNA -2 164 17 214 140 0 40 chr10 83510778 83510828 -62078460 + (TA)n Simple_repeat Simple_repeat 2 49 0 212 338 81 15 chr10 83510828 83510964 -62078324 - MIR3 SINE MIR -45 163 19 1237 194 40 119 chr10 83511047 83511552 -62077736 + MER4C LTR ERV1 1 465 0 2166 107 10 0 chr10 83512702 83512991 -62076297 + AluSc SINE Alu 1 292 -17 183 284 63 42 chr10 83513541 83513636 -62075652 - MIR SINE MIR -57 151 55 204 224 0 69 chr10 83513836 83513894 -62075394 + G-rich Low_complexity Low_complexity 6 59 0 2238 133 0 0 chr10 83514137 83514439 -62074849 - AluSx SINE Alu -10 302 1 232 356 56 11 chr10 83515648 83515738 -62073550 - L2 LINE L2 -36 3236 3143 1073 243 63 87 chr10 83515823 83515951 -62073337 + MER113 DNA MER1_type? 1 131 -390 1588 161 70 11 chr10 83515951 83516224 -62073064 - AluJo SINE Alu -23 289 1 1073 243 63 87 chr10 83516224 83516601 -62072687 + MER113 DNA MER1_type? 131 494 -27 186 363 22 0 chr10 83516790 83516881 -62072407 - MIR SINE MIR -111 151 59 476 234 123 32 chr10 83517504 83517658 -62071630 - MIR SINE MIR -35 227 60 342 0 0 0 chr10 83517944 83517982 -62071306 + (CA)n Simple_repeat Simple_repeat 2 39 0 283 269 141 26 chr10 83518843 83518999 -62070289 - MER102a DNA MER1_type 0 330 157 873 189 33 7 chr10 83519050 83519203 -62070085 - FRAM SINE Alu -5 161 5 2218 111 17 0 chr10 83519272 83519570 -62069718 + AluSp SINE Alu 3 305 -8 650 173 115 7 chr10 83519570 83519709 -62069579 - MIR SINE MIR -52 210 57 2075 89 30 0 chr10 83519789 83520060 -62069228 + AluSx SINE Alu 11 289 -23 845 36 27 0 chr10 83520062 83520173 -62069115 + (GAGAA)n Simple_repeat Simple_repeat 4 117 0 326 248 40 30 chr10 83520173 83520274 -62069014 - L1MC4 LINE L1 -17 8025 7924 214 215 108 31 chr10 83520812 83520877 -62068411 + MER91C DNA MER1_type 37 106 -34 213 321 9 46 chr10 83521005 83521114 -62068174 + MIR SINE MIR 23 127 -81 184 315 0 0 chr10 83521143 83521197 -62068091 - L2 LINE L2 -12 3260 3207 634 280 65 10 chr10 83521242 83521442 -62067846 - MIR SINE MIR -40 222 12 2412 80 0 16 chr10 83521798 83522112 -62067176 - AluY SINE Alu -2 309 1 653 247 39 65 chr10 83523438 83523669 -62065619 + MIR SINE MIR 23 247 -15 296 305 29 19 chr10 83524554 83524719 -62064569 + MIR SINE MIR 15 181 -27 888 176 70 0 chr10 83524814 83525041 -62064247 + L1MA4 LINE L1 6057 6299 -1 357 62 0 0 chr10 83526338 83526386 -62062902 + (CA)n Simple_repeat Simple_repeat 1 48 0 240 274 39 84 chr10 83527793 83527972 -62061316 + L2 LINE L2 2866 3036 -236 652 271 103 29 chr10 83527988 83528365 -62060923 + LTR16A LTR ERVL 10 414 -36 221 327 87 0 chr10 83529414 83529518 -62059770 - MIR SINE MIR -33 229 117 2296 87 17 0 chr10 83529797 83530086 -62059202 + AluSg SINE Alu 1 294 -16 573 292 100 65 chr10 83530107 83530597 -62058691 + L1ME4a LINE L1 5601 6107 -14 2602 63 0 13 chr10 83530616 83530931 -62058357 - AluY SINE Alu 0 311 1 309 209 0 0 chr10 83530994 83531061 -62058227 + Charlie5 DNA MER1_type 2519 2585 -27 709 211 137 0 chr10 83531076 83531237 -62058051 + MIR SINE MIR 65 247 -15 339 311 38 15 chr10 83531953 83532085 -62057203 - MIR3 SINE MIR -7 201 67 510 268 88 64 chr10 83532148 83532398 -62056890 + L2 LINE L2 3058 3313 0 192 254 18 18 chr10 83532809 83532864 -62056424 - L2 LINE L2 -19 3294 3240 2585 156 23 4 chr10 83533298 83533908 -62055380 + L1M2 LINE L1 4912 5537 -743 477 256 0 31 chr10 83533914 83534043 -62055245 - MER90 LTR ERV1 -36 539 415 186 270 0 0 chr10 83534630 83534667 -62054621 + MER5B DNA MER1_type 136 172 -6 303 366 75 11 chr10 83535853 83536039 -62053249 - L2 LINE L2 -436 2878 2681 404 267 36 55 chr10 83536162 83536327 -62052961 - MIR3 SINE MIR -9 199 38 318 26 0 0 chr10 83537667 83537706 -62051582 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 628 124 4 58 chr10 83538147 83538389 -62050899 + (GGGA)n Simple_repeat Simple_repeat 1 229 0 248 250 26 26 chr10 83538640 83538716 -62050572 + L2 LINE L2 3196 3271 -1 732 220 148 31 chr10 83539451 83539674 -62049614 - MIR SINE MIR 0 262 14 1259 210 73 34 chr10 83540861 83541112 -62048176 - MER58B DNA MER1_type -2079 341 73 1836 176 0 19 chr10 83541112 83541424 -62047864 + AluJo SINE Alu 1 306 -6 1259 210 73 34 chr10 83541424 83541500 -62047788 - MER58B DNA MER1_type -2347 73 1 368 269 17 0 chr10 83541565 83541684 -62047604 + MER103 DNA DNA 3 123 -43 293 318 11 0 chr10 83541803 83541891 -62047397 - L3 LINE CR1 -84 1493 1405 228 35 0 0 chr10 83542366 83542395 -62046893 + (CAGAGA)n Simple_repeat Simple_repeat 2 30 0 252 219 0 123 chr10 83543344 83543394 -62045894 + MER58 DNA MER1_type 4 59 -282 1291 122 82 28 chr10 83543394 83543649 -62045639 - L1MA4 LINE L1 0 6300 6032 252 219 0 123 chr10 83543649 83543671 -62045617 + MER58 DNA MER1_type 59 184 -157 4821 130 18 58 chr10 83543671 83544086 -62045202 - L1PB4 LINE L1 -7 6149 5719 285 98 0 0 chr10 83544086 83544127 -62045161 + (TG)n Simple_repeat Simple_repeat 2 42 0 4821 130 18 58 chr10 83544127 83544685 -62044603 - L1PB4 LINE L1 -437 5719 5215 606 211 125 0 chr10 83544685 83544837 -62044451 + MER58A DNA MER1_type 51 221 -3 323 244 64 0 chr10 83545824 83545902 -62043386 + L2 LINE L2 3225 3307 -6 372 266 40 40 chr10 83546606 83546730 -62042558 + MIR SINE MIR 18 141 -67 189 239 65 0 chr10 83546849 83546895 -62042393 + MIR SINE MIR 198 246 -16 2291 86 3 27 chr10 83547202 83547503 -62041785 - AluY SINE Alu -17 294 1 617 202 9 0 chr10 83549047 83549156 -62040132 - MER81 DNA DNA 0 114 5 1963 91 8 4 chr10 83550311 83550596 -62038692 - AluSx SINE Alu 0 316 31 586 271 129 12 chr10 83550701 83551097 -62038191 + MLT1K LTR MaLR 10 533 -55 788 265 226 3 chr10 83551166 83551475 -62037813 + L2 LINE L2 2934 3311 -2 810 143 65 7 chr10 83551529 83551683 -62037605 + MER53 DNA DNA 3 165 -24 384 201 275 20 chr10 83552505 83552654 -62036634 - MER5A DNA MER1_type 0 189 3 312 319 30 22 chr10 83553483 83553618 -62035670 - MIR SINE MIR -8 254 119 240 286 191 25 chr10 83553640 83553839 -62035449 + MIR SINE MIR 9 240 -22 249 351 9 0 chr10 83554058 83554169 -62035119 + L3 LINE CR1 1446 1557 -20 218 213 21 0 chr10 83554176 83554223 -62035065 - MIR3 SINE MIR -51 157 110 564 240 0 0 chr10 83554446 83554625 -62034663 + (TG)n Simple_repeat Simple_repeat 2 180 0 253 220 30 126 chr10 83555307 83555503 -62033785 - MIR3 SINE MIR 0 208 35 529 275 122 28 chr10 83556609 83556910 -62032378 + L2 LINE L2 2688 3026 -287 1419 132 5 5 chr10 83557054 83557267 -62032021 - AluSg/x SINE Alu -3 309 97 201 196 0 0 chr10 83557340 83557386 -62031902 + GA-rich Low_complexity Low_complexity 1 46 0 269 241 330 0 chr10 83557500 83557612 -62031676 - MIR SINE MIR -82 180 32 249 238 61 0 chr10 83558581 83558657 -62030631 + MIR SINE MIR 69 149 -59 2172 116 0 3 chr10 83558901 83559219 -62030069 - AluSx SINE Alu 0 317 1 246 247 93 41 chr10 83560143 83560240 -62029048 + MIR3 SINE MIR 86 187 -21 501 298 110 23 chr10 83560461 83560539 -62028749 - MIR SINE MIR -25 237 167 2216 123 7 0 chr10 83560539 83560849 -62028439 - AluSx SINE Alu 0 312 1 501 298 110 23 chr10 83560849 83560988 -62028300 - MIR SINE MIR -95 167 1 182 302 0 0 chr10 83562146 83562189 -62027099 - MIR3 SINE MIR -50 158 116 250 301 55 0 chr10 83562789 83562862 -62026426 + L2 LINE L2 3210 3286 -27 207 0 0 0 chr10 83565490 83565513 -62023775 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 204 284 159 23 chr10 83565949 83566037 -62023251 - L2 LINE L2 -2301 1013 914 206 352 80 0 chr10 83566426 83566514 -62022774 + L2 LINE L2 2976 3070 -202 184 319 0 72 chr10 83566666 83566735 -62022553 + L2 LINE L2 3189 3252 -20 409 303 97 48 chr10 83566862 83567349 -62021939 + L2 LINE L2 2543 3055 -217 1763 198 24 3 chr10 83567487 83567820 -62021468 - MER58B DNA MER1_type -1 340 1 263 376 83 0 chr10 83567820 83567929 -62021359 + L2 LINE L2 3148 3265 -7 230 300 0 57 chr10 83568038 83568178 -62021110 - MER103 DNA DNA -34 132 1 750 232 38 22 chr10 83568266 83568451 -62020837 - MER5A DNA MER1_type -1 188 1 1497 216 92 12 chr10 83568600 83569026 -62020262 + MLT1C LTR MaLR 1 460 -7 215 340 38 9 chr10 83570196 83570302 -62018986 + MIR SINE MIR 95 203 -59 391 319 151 0 chr10 83570321 83570487 -62018801 - MIR SINE MIR -13 249 59 288 0 0 0 chr10 83570558 83570590 -62018698 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 235 346 63 44 chr10 83570644 83570849 -62018439 - L2 LINE L2 -78 3194 2986 290 326 72 22 chr10 83570963 83571101 -62018187 + L2 LINE L2 3122 3266 -6 381 93 0 0 chr10 83571101 83571155 -62018133 + (TGGA)n Simple_repeat Simple_repeat 4 57 0 352 229 201 62 chr10 83572337 83572516 -62016772 + MIR SINE MIR 59 262 0 2074 130 0 33 chr10 83572773 83573074 -62016214 + AluSx SINE Alu 1 291 -21 553 291 56 34 chr10 83574000 83574234 -62015054 + MIR SINE MIR 12 250 -12 232 339 34 0 chr10 83574376 83574494 -62014794 - L3 LINE CR1 -243 1334 1213 481 307 17 34 chr10 83576660 83576839 -62012449 + MIR3 SINE MIR 25 200 -8 607 286 73 15 chr10 83577220 83577426 -62011862 + MIR SINE MIR 2 219 -43 208 309 59 0 chr10 83577531 83577599 -62011689 + MIR SINE MIR 190 261 -1 256 246 236 9 chr10 83578212 83578322 -62010966 + MIR3 SINE MIR 26 160 -48 587 270 90 9 chr10 83578322 83578544 -62010744 + MER112 DNA MER1_type 1 240 -20 195 42 0 0 chr10 83578547 83578571 -62010717 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2142 105 0 25 chr10 83578575 83578860 -62010428 - AluSg SINE Alu -32 278 1 191 278 153 0 chr10 83580585 83580657 -62008631 + MIR SINE MIR 109 191 -71 1884 106 15 19 chr10 83580846 83581110 -62008178 + AluSq SINE Alu 41 303 -10 21 0 0 0 chr10 83581185 83581206 -62008082 + AT_rich Low_complexity Low_complexity 1 21 0 2270 122 10 0 chr10 83582229 83582532 -62006756 - AluSx SINE Alu -6 306 1 366 275 94 8 chr10 83582533 83582716 -62006572 - MIR SINE MIR -62 200 1 2216 135 3 3 chr10 83584129 83584441 -62004847 - AluSq SINE Alu -1 312 1 356 320 25 43 chr10 83584712 83584896 -62004392 + MER5A DNA MER1_type 1 186 -3 192 184 158 26 chr10 83584842 83584918 -62004370 - L3 LINE CR1 -1234 343 258 * 2158 117 40 0 chr10 83585689 83585989 -62003299 - AluSx SINE Alu 0 312 1 649 287 37 19 chr10 83586269 83586485 -62002803 - MIR SINE MIR -27 235 16 207 260 20 0 chr10 83587276 83587326 -62001962 + MIR3 SINE MIR 104 154 -54 896 147 0 0 chr10 83587625 83587754 -62001534 + FLAM_A SINE Alu 1 129 -4 214 289 0 13 chr10 83588530 83588606 -62000682 + CT-rich Low_complexity Low_complexity 3 77 0 307 278 35 52 chr10 83589545 83589660 -61999628 + MIR SINE MIR 111 223 -39 602 220 7 43 chr10 83589813 83589954 -61999334 + L2 LINE L2 3176 3311 -2 476 275 14 16 chr10 83589968 83590127 -61999161 - MIR SINE MIR -65 143 6 1078 189 31 44 chr10 83590725 83590952 -61998336 - MER58A DNA MER1_type 0 224 1 233 125 0 21 chr10 83592463 83592511 -61996777 + (GGA)n Simple_repeat Simple_repeat 1 47 0 491 253 30 59 chr10 83593766 83593946 -61995342 + L3 LINE CR1 1211 1384 -193 512 255 31 56 chr10 83593946 83594142 -61995146 + MIR SINE MIR 3 193 -69 222 265 106 82 chr10 83594167 83594412 -61994876 + L3 LINE CR1 1327 1577 0 865 270 143 19 chr10 83594460 83594565 -61994723 - HAL1b LINE L1 -41 1307 1216 360 0 0 0 chr10 83594565 83594605 -61994683 + (CA)n Simple_repeat Simple_repeat 1 40 0 865 270 143 19 chr10 83594605 83595017 -61994271 - HAL1b LINE L1 -132 1216 726 450 101 0 0 chr10 83595680 83595749 -61993539 + (GA)n Simple_repeat Simple_repeat 1 69 0 354 292 14 28 chr10 83596153 83596297 -61992991 + MER5B DNA MER1_type 36 177 -1 220 189 0 0 chr10 83596305 83596342 -61992946 + L3b LINE CR1 1542 1578 -5 1206 202 38 15 chr10 83596469 83596765 -61992523 - MLT1A1 LTR MaLR 0 365 1 739 237 6 23 chr10 83596866 83597043 -61992245 - MER5B DNA MER1_type -1 177 4 415 316 82 12 chr10 83597175 83597346 -61991942 + MIR SINE MIR 1 183 -79 354 281 97 54 chr10 83597349 83597740 -61991548 - L1MEc LINE L1 -3802 2413 2062 2175 114 0 14 chr10 83597740 83598037 -61991251 - AluSx SINE Alu -19 293 1 203 273 0 0 chr10 83598408 83598452 -61990836 + MIR SINE MIR 218 261 -1 199 297 131 55 chr10 83599413 83599558 -61989730 + MIR SINE MIR 42 197 -65 470 270 51 7 chr10 83600133 83600270 -61989018 - MIR SINE MIR -92 170 28 360 216 0 26 chr10 83600510 83600787 -61988501 + (TG)n Simple_repeat Simple_repeat 1 269 0 575 278 36 56 chr10 83602041 83602298 -61986990 + MIR SINE MIR 12 262 0 5201 133 11 0 chr10 83602569 83603394 -61985894 - L1MA4 LINE L1 -6 6294 5461 878 166 0 0 chr10 83603958 83604115 -61985173 - L1MA4 LINE L1 -115 6185 6029 192 304 0 18 chr10 83604120 83604176 -61985112 - MIR SINE MIR -136 72 18 336 246 131 11 chr10 83604453 83604615 -61984673 - L1MC/D LINE L1 -303 5818 5646 298 384 38 0 chr10 83605306 83605439 -61983849 - MIR3 SINE MIR -68 140 3 321 362 9 0 chr10 83605939 83606044 -61983244 + MIR SINE MIR 47 152 -56 261 284 21 71 chr10 83606882 83607023 -61982265 + MIR3 SINE MIR 60 193 -15 262 335 87 29 chr10 83607565 83607738 -61981550 + MIR SINE MIR 13 195 -67 313 273 58 122 chr10 83608299 83608504 -61980784 - MIR3 SINE MIR -14 194 3 244 283 122 28 chr10 83608668 83608803 -61980485 + MIR SINE MIR 12 143 -65 241 274 144 91 chr10 83609174 83609536 -61979752 - L2 LINE L2 -49 3223 2843 2040 222 81 2 chr10 83609656 83610122 -61979166 - L1MB5 LINE L1 0 6174 5657 2389 98 3 3 chr10 83610122 83610429 -61978859 - AluSx SINE Alu -5 307 1 2040 222 81 2 chr10 83610429 83610507 -61978781 - L1MB5 LINE L1 -517 5657 5587 700 239 12 6 chr10 83610632 83610795 -61978493 - MIR SINE MIR -78 184 21 195 100 0 0 chr10 83611036 83611066 -61978222 + (TC)n Simple_repeat Simple_repeat 2 31 0 204 150 25 0 chr10 83611130 83611170 -61978118 + GA-rich Low_complexity Low_complexity 1 41 0 258 224 66 0 chr10 83611868 83611944 -61977344 + GA-rich Low_complexity Low_complexity 4 84 0 793 327 68 21 chr10 83612420 83612903 -61976385 - MLT1L LTR MaLR -4 611 106 517 237 8 8 chr10 83613036 83613154 -61976134 - MIR3 SINE MIR -4 204 87 2352 80 68 6 chr10 83614664 83615015 -61974273 - L1MA1 LINE L1 -8 6294 5922 262 216 69 26 chr10 83615015 83615131 -61974157 - L1ME3A LINE L1 -1 6169 6049 216 339 14 119 chr10 83615493 83615779 -61973509 - L2 LINE L2 -13 3259 3004 2168 105 3 11 chr10 83616547 83616862 -61972426 - AluSx SINE Alu 0 313 1 683 278 19 53 chr10 83617085 83617348 -61971940 - MIR SINE MIR -1 261 8 340 287 52 37 chr10 83617553 83617689 -61971599 + L2 LINE L2 2904 3041 -272 236 242 48 19 chr10 83618226 83618364 -61970924 - MIR SINE MIR 0 262 83 225 268 27 44 chr10 83618595 83618778 -61970510 + (CACAC)n Simple_repeat Simple_repeat 1 180 0 272 206 206 37 chr10 83620345 83620452 -61968836 - MIR SINE MIR -59 149 25 721 328 50 29 chr10 83620676 83621054 -61968234 - L2 LINE L2 -27 3286 2901 485 231 108 89 chr10 83621051 83621320 -61967968 + L2 LINE L2 3039 3312 -1 * 520 273 226 21 chr10 83622487 83622868 -61966420 - L2 LINE L2 0 3313 2855 197 350 57 24 chr10 83622901 83623024 -61966264 + L2 LINE L2 3134 3260 -12 226 295 64 89 chr10 83623058 83623339 -61965949 - L2 LINE L2 -32 3240 2967 454 256 52 71 chr10 83623605 83623816 -61965472 + Charlie8 DNA MER1_type 2 208 -2209 632 273 101 44 chr10 83625652 83626189 -61963099 - L2 LINE L2 -169 3144 2583 1502 118 9 0 chr10 83626229 83626458 -61962830 - MLT1B LTR MaLR -88 302 72 1420 158 87 42 chr10 83626463 83626773 -61962515 - MER44D DNA MER2_type -10 599 6 736 50 20 0 chr10 83626773 83626873 -61962415 + MER83 LTR ERV1 1 102 -346 1142 179 67 128 chr10 83626884 83627275 -61962013 + MER83 LTR ERV1 55 421 -27 749 309 27 23 chr10 83627382 83627641 -61961647 - MIR SINE MIR 0 262 3 1066 158 27 0 chr10 83627784 83627968 -61961320 + MER5A DNA MER1_type 1 189 0 1235 139 5 34 chr10 83628234 83628443 -61960845 - AluJo SINE Alu -8 304 102 283 297 64 22 chr10 83628809 83628957 -61960331 - MIR SINE MIR -63 145 20 3326 155 25 28 chr10 83629356 83629637 -61959651 + L1MB3 LINE L1 5451 5731 -452 2050 112 11 0 chr10 83629637 83629914 -61959374 + AluSx SINE Alu 1 280 -32 363 32 32 32 chr10 83629915 83629977 -61959311 + (CAA)n Simple_repeat Simple_repeat 2 63 0 3326 155 25 28 chr10 83629977 83630371 -61958917 + L1MB3 LINE L1 5730 6126 -57 286 220 0 0 chr10 83630371 83630430 -61958858 + FLAM_A SINE Alu 75 133 0 288 77 0 0 chr10 83630456 83630495 -61958793 + (A)n Simple_repeat Simple_repeat 1 39 0 298 130 0 0 chr10 83630497 83630551 -61958737 + L1MB4 LINE L1 6126 6179 -1 1644 196 3 32 chr10 83630570 83630886 -61958402 + AluJb SINE Alu 1 307 -5 946 280 20 26 chr10 83630968 83631311 -61957977 - L1ME4a LINE L1 -258 5863 5523 429 103 0 86 chr10 83632161 83632182 -61957106 + (TC)n Simple_repeat Simple_repeat 2 23 -84 288 0 0 0 chr10 83632182 83632214 -61957074 + (CA)n Simple_repeat Simple_repeat 2 33 0 429 103 0 86 chr10 83632214 83632308 -61956980 + (TC)n Simple_repeat Simple_repeat 23 107 0 203 43 0 130 chr10 83632328 83632374 -61956914 + (TC)n Simple_repeat Simple_repeat 2 41 0 498 155 0 50 chr10 83632387 83632568 -61956720 + CT-rich Low_complexity Low_complexity 2 173 0 275 378 63 14 chr10 83633087 83633309 -61955979 + L2 LINE L2 2552 2784 -530 225 288 15 15 chr10 83633683 83633749 -61955539 + L2 LINE L2 3206 3271 -1 954 179 0 43 chr10 83634293 83634477 -61954811 + FRAM SINE Alu 1 176 0 198 329 71 14 chr10 83635324 83635394 -61953894 + L2 LINE L2 3204 3277 -36 794 189 0 8 chr10 83635952 83636084 -61953204 - FLAM_A SINE Alu -2 131 1 642 224 25 25 chr10 83636226 83636387 -61952901 - MIR SINE MIR -54 208 48 287 312 32 24 chr10 83636961 83637086 -61952202 + MIR3 SINE MIR 81 206 -2 527 273 83 37 chr10 83637767 83637983 -61951305 - MIR SINE MIR -19 243 18 554 191 197 14 chr10 83637994 83638141 -61951147 - MER5A DNA MER1_type -2 187 14 746 146 0 0 chr10 83638566 83638676 -61950612 - FLAM_C SINE Alu -20 123 14 435 300 27 37 chr10 83638680 83638966 -61950322 - L1MEc LINE L1 -3834 2409 2142 234 261 97 37 chr10 83639215 83639349 -61949939 - HAL1b LINE L1 -574 774 633 313 273 152 0 chr10 83639565 83639664 -61949624 + L1MC4 LINE L1 6611 6724 -1318 591 326 70 4 chr10 83639968 83640195 -61949093 - MIR SINE MIR -14 248 7 355 245 50 58 chr10 83642241 83642380 -61946908 + MIR SINE MIR 65 202 -60 2563 68 0 3 chr10 83642431 83642740 -61946548 - AluY SINE Alu -3 308 1 2283 153 77 25 chr10 83643920 83644364 -61944924 + MLT1C LTR MaLR 1 467 0 201 220 60 20 chr10 83645111 83645161 -61944127 - MIR SINE MIR -61 147 96 406 268 207 10 chr10 83646013 83646211 -61943077 + MIR SINE MIR 16 252 -10 323 267 302 12 chr10 83646268 83646440 -61942848 - MIR SINE MIR -21 241 20 333 336 66 0 chr10 83646472 83646609 -61942679 + MIR SINE MIR 105 250 -12 366 23 0 0 chr10 83647300 83647343 -61941945 + (TG)n Simple_repeat Simple_repeat 1 43 0 180 212 0 0 chr10 83647989 83648022 -61941266 + MIR SINE MIR 115 147 -61 358 255 149 0 chr10 83648364 83648458 -61940830 + MIR SINE MIR 84 191 -71 307 275 20 81 chr10 83648847 83648909 -61940379 - MIR3 SINE MIR -9 199 135 911 170 192 0 chr10 83648909 83649091 -61940197 + MER20 DNA MER1_type 3 219 0 307 275 20 81 chr10 83649091 83649177 -61940111 - MIR3 SINE MIR -73 135 60 689 134 29 129 chr10 83649379 83649416 -61939872 + MER53 DNA DNA 2 41 -148 2232 111 0 10 chr10 83649416 83649750 -61939538 + AluSq SINE Alu 1 313 0 689 134 29 129 chr10 83649750 83649921 -61939367 + MER53 DNA DNA 41 189 0 693 226 73 6 chr10 83651088 83651265 -61938023 - MER5A DNA MER1_type 0 189 1 201 239 197 26 chr10 83651341 83651458 -61937830 - L2 LINE L2 -9 3304 3168 460 366 30 4 chr10 83652517 83652752 -61936536 - MIR SINE MIR 0 262 22 278 230 207 11 chr10 83653692 83653779 -61935509 + Charlie7 DNA MER1_type 1 104 -2508 682 254 16 11 chr10 83654217 83654402 -61934886 + MER5A DNA MER1_type 1 186 -3 557 299 28 17 chr10 83654428 83654605 -61934683 + MIR SINE MIR 52 230 -32 474 18 0 0 chr10 83656013 83656068 -61933220 + (TG)n Simple_repeat Simple_repeat 1 55 0 287 232 12 0 chr10 83656069 83656151 -61933137 + GA-rich Low_complexity Low_complexity 3 85 0 297 221 150 44 chr10 83657135 83657248 -61932040 + MIR SINE MIR 105 229 -33 2406 91 0 3 chr10 83657255 83657562 -61931726 - AluY SINE Alu -5 306 1 198 167 0 0 chr10 83657871 83657907 -61931381 + (TG)n Simple_repeat Simple_repeat 1 36 0 2259 82 7 33 chr10 83657923 83658227 -61931061 - AluSx SINE Alu -16 296 1 308 307 100 0 chr10 83659362 83659502 -61929786 + MIR SINE MIR 74 227 -35 397 285 158 11 chr10 83659905 83660273 -61929015 - L1ME4a LINE L1 -9 6112 5691 205 309 165 0 chr10 83660468 83660565 -61928723 + MIR3 SINE MIR 89 201 -7 495 280 24 30 chr10 83661418 83661586 -61927702 - MER117 DNA MER1_type -29 168 2 242 320 90 60 chr10 83661831 83662031 -61927257 - MIR SINE MIR -37 225 20 245 298 0 105 chr10 83662085 83662209 -61927079 + L2 LINE L2 3154 3264 -8 459 331 51 6 chr10 83663130 83663287 -61926001 + MIR3 SINE MIR 42 205 -3 325 157 0 0 chr10 83663464 83663515 -61925773 + MIR SINE MIR 104 154 -108 245 337 58 35 chr10 83664126 83664298 -61924990 - MIR3 SINE MIR -15 193 18 1990 173 21 13 chr10 83664461 83664842 -61924446 - MLT1B LTR MaLR -6 384 1 557 313 97 23 chr10 83665329 83665722 -61923566 - L3 LINE CR1 -4 1573 1152 492 134 11 53 chr10 83666532 83666719 -61922569 + (TG)n Simple_repeat Simple_repeat 1 179 0 372 131 15 51 chr10 83666744 83666881 -61922407 + (TG)n Simple_repeat Simple_repeat 1 132 0 475 150 36 40 chr10 83666961 83667453 -61921835 + (TG)n Simple_repeat Simple_repeat 1 489 0 329 104 75 35 chr10 83667491 83667664 -61921624 + (TG)n Simple_repeat Simple_repeat 1 180 0 304 103 64 26 chr10 83667674 83667752 -61921536 + (TTGTG)n Simple_repeat Simple_repeat 4 84 0 283 102 78 36 chr10 83667755 83667922 -61921366 + (TG)n Simple_repeat Simple_repeat 1 174 0 226 107 90 25 chr10 83667940 83668062 -61921226 + (TG)n Simple_repeat Simple_repeat 2 131 0 196 268 0 0 chr10 83670171 83670212 -61919076 - L2 LINE L2 -11 3261 3221 478 226 96 41 chr10 83670216 83670283 -61919005 - MIR SINE MIR -81 181 119 2129 134 12 77 chr10 83670283 83670700 -61918588 - MLT1B LTR MaLR 0 390 1 478 226 96 41 chr10 83670700 83670778 -61918510 - MIR SINE MIR -143 119 28 1645 125 0 12 chr10 83670812 83671052 -61918236 + AluSg/x SINE Alu 76 312 0 184 289 10 10 chr10 83672041 83672138 -61917150 + CT-rich Low_complexity Low_complexity 1 97 0 415 247 108 59 chr10 83672441 83672627 -61916661 + L2 LINE L2 3119 3313 0 185 211 0 0 chr10 83672788 83672826 -61916462 - L2 LINE L2 -95 3218 3181 304 275 44 11 chr10 83673141 83673232 -61916056 - MER91C DNA MER1_type -22 118 25 840 304 4 13 chr10 83673360 83673587 -61915701 - MIR SINE MIR -6 256 32 394 326 15 0 chr10 83674338 83674473 -61914815 + MIR3 SINE MIR 35 171 -37 22 0 0 0 chr10 83674568 83674590 -61914698 + AT_rich Low_complexity Low_complexity 1 22 0 376 292 8 33 chr10 83674843 83674954 -61914334 - MIR SINE MIR -72 136 29 408 252 211 0 chr10 83674954 83675101 -61914187 - MER5A DNA MER1_type -2 187 10 182 160 0 100 chr10 83675661 83675711 -61913577 - MIR SINE MIR -110 152 108 225 284 0 12 chr10 83676548 83676719 -61912569 + (TATG)n Simple_repeat Simple_repeat 1 168 0 512 252 3 3 chr10 83676720 83677059 -61912229 + (TG)n Simple_repeat Simple_repeat 1 339 0 458 279 47 16 chr10 83677533 83677662 -61911626 + MIR3 SINE MIR 37 169 -39 3256 94 38 56 chr10 83677817 83677924 -61911364 - L1PB4 LINE L1 -21 6135 6028 2317 108 0 0 chr10 83677924 83678221 -61911067 - AluSq SINE Alu -16 297 1 3256 94 38 56 chr10 83678221 83678482 -61910806 - L1PB4 LINE L1 -128 6028 5778 276 100 0 0 chr10 83678482 83678522 -61910766 + (TG)n Simple_repeat Simple_repeat 2 41 0 3256 94 38 56 chr10 83678522 83678725 -61910563 - L1PB4 LINE L1 -378 5778 5573 1027 194 48 5 chr10 83678881 83679087 -61910201 + MER58A DNA MER1_type 2 216 -8 751 289 19 9 chr10 83679094 83679305 -61909983 - MIR SINE MIR -46 216 4 337 257 53 9 chr10 83679950 83680063 -61909225 + LTR16C LTR ERVL 156 273 -218 890 193 62 0 chr10 83680071 83680263 -61909025 + MER3 DNA MER1_type 1 204 -5 437 299 45 6 chr10 83680267 83680424 -61908864 + LTR16C LTR ERVL 275 437 -54 298 194 14 14 chr10 83680428 83680500 -61908788 - MER116 DNA Mariner -6 74 3 294 200 57 0 chr10 83680609 83680679 -61908609 + MIR SINE MIR 51 124 -84 843 238 72 92 chr10 83681380 83681867 -61907421 - LTR33A LTR ERVL -45 478 2 772 323 63 24 chr10 83682440 83682818 -61906470 - L2 LINE L2 -6 3307 2915 240 277 163 59 chr10 83683709 83683911 -61905377 + MIR SINE MIR 37 256 -6 3178 231 35 8 chr10 83684823 83685622 -61903666 - L1MEc LINE L1 -5518 878 58 305 0 50 0 chr10 83685652 83685692 -61903596 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 232 282 200 0 chr10 83685978 83686088 -61903200 - MIR SINE MIR -16 246 115 190 333 36 24 chr10 83687419 83687503 -61901785 + L2 LINE L2 3006 3090 -182 2550 117 17 6 chr10 83687902 83688262 -61901026 - THE1B LTR MaLR 0 364 1 364 270 104 78 chr10 83688446 83688676 -61900612 - L1ME4a LINE L1 -3 6118 5883 1849 129 0 0 chr10 83688692 83688940 -61900348 + AluSq SINE Alu 3 250 -63 666 154 0 51 chr10 83688985 83689102 -61900186 + FRAM SINE Alu 54 164 -12 2602 63 0 13 chr10 83689104 83689419 -61899869 + AluY SINE Alu 1 311 0 573 292 100 65 chr10 83689438 83689928 -61899360 - L1ME4a LINE L1 -14 6107 5601 2296 87 17 0 chr10 83689949 83690238 -61899050 - AluSg SINE Alu -16 294 1 221 327 87 0 chr10 83690517 83690621 -61898667 + MIR SINE MIR 117 229 -33 652 271 103 29 chr10 83691670 83692047 -61897241 - LTR16A LTR ERVL -36 414 10 240 274 39 84 chr10 83692063 83692242 -61897046 - L2 LINE L2 -236 3036 2866 357 62 0 0 chr10 83693649 83693697 -61895591 + (TG)n Simple_repeat Simple_repeat 1 48 0 888 176 70 0 chr10 83694994 83695221 -61894067 - L1MA4 LINE L1 -1 6299 6057 296 305 29 19 chr10 83695316 83695481 -61893807 - MIR SINE MIR -27 181 15 653 247 39 65 chr10 83696366 83696597 -61892691 - MIR SINE MIR -15 247 23 2412 80 0 16 chr10 83697923 83698237 -61891051 + AluY SINE Alu 1 309 -2 634 280 65 10 chr10 83698593 83698793 -61890495 + MIR SINE MIR 12 222 -40 184 315 0 0 chr10 83698838 83698892 -61890396 + L2 LINE L2 3207 3260 -12 213 321 9 46 chr10 83698921 83699030 -61890258 - MIR SINE MIR -81 127 23 214 215 108 31 chr10 83699158 83699223 -61890065 + MER91C DNA MER1_type 35 104 -36 326 248 40 30 chr10 83699761 83699862 -61889426 + L1MC4 LINE L1 7924 8025 -17 800 38 28 0 chr10 83699862 83699968 -61889320 + (TTCTC)n Simple_repeat Simple_repeat 4 112 0 2075 89 30 0 chr10 83699970 83700241 -61889047 - AluSx SINE Alu -23 289 11 650 173 115 7 chr10 83700321 83700460 -61888828 + MIR SINE MIR 57 210 -52 2218 111 17 0 chr10 83700460 83700758 -61888530 - AluSp SINE Alu -8 305 3 873 189 33 7 chr10 83700827 83700980 -61888308 + FRAM SINE Alu 5 161 -5 283 269 141 26 chr10 83701031 83701187 -61888101 + MER102b DNA MER1_type 168 341 0 360 0 0 0 chr10 83702048 83702088 -61887200 + (TG)n Simple_repeat Simple_repeat 2 41 0 476 234 123 32 chr10 83702374 83702528 -61886760 + MIR SINE MIR 60 227 -35 186 363 22 0 chr10 83703151 83703242 -61886046 + MIR SINE MIR 59 151 -111 1073 243 63 87 chr10 83703431 83703808 -61885480 - MER113 DNA MER1_type? -27 494 131 1588 161 70 11 chr10 83703808 83704081 -61885207 + AluJo SINE Alu 1 289 -23 1073 243 63 87 chr10 83704081 83704209 -61885079 - MER113 DNA MER1_type? -390 131 1 232 356 56 11 chr10 83704294 83704384 -61884904 + L2 LINE L2 3143 3236 -36 2238 133 0 0 chr10 83705593 83705895 -61883393 + AluSx SINE Alu 1 302 -10 204 224 0 69 chr10 83706138 83706196 -61883092 + C-rich Low_complexity Low_complexity 6 59 0 183 284 63 42 chr10 83706396 83706491 -61882797 + MIR SINE MIR 55 151 -57 2198 104 10 0 chr10 83707041 83707330 -61881958 - AluSc SINE Alu -17 292 1 306 0 0 0 chr10 83707330 83707364 -61881924 + (T)n Simple_repeat Simple_repeat 1 34 0 1254 192 40 119 chr10 83708497 83709002 -61880286 - MER4C LTR ERV1 0 465 1 212 338 81 15 chr10 83709085 83709221 -61880067 + MIR3 SINE MIR 19 163 -45 214 140 0 40 chr10 83709221 83709271 -61880017 + (TA)n Simple_repeat Simple_repeat 2 49 0 545 224 41 34 chr10 83709338 83709485 -61879803 + MER103 DNA DNA 17 164 -2 1064 176 13 48 chr10 83709557 83709784 -61879504 + MER20 DNA MER1_type 1 219 0 223 216 83 95 chr10 83710771 83710925 -61878363 + MIR3 SINE MIR 51 202 -43 2258 85 0 14 chr10 83710995 83711329 -61877959 + AluSc SINE Alu 1 330 0 396 274 46 46 chr10 83711566 83711719 -61877569 - MIR SINE MIR -62 200 48 659 209 136 5 chr10 83712000 83712191 -61877097 - MER112 DNA MER1_type -39 221 6 966 260 22 0 chr10 83712501 83712732 -61876556 + MIR SINE MIR 23 258 -4 212 239 230 35 chr10 83712853 83712966 -61876322 - MIR SINE MIR -3 259 125 852 63 0 0 chr10 83713890 83714001 -61875287 + (TCCA)n Simple_repeat Simple_repeat 4 114 0 290 326 72 22 chr10 83714001 83714139 -61875149 - L2 LINE L2 -6 3266 3122 235 346 63 44 chr10 83714253 83714458 -61874830 + L2 LINE L2 2986 3194 -78 252 0 0 0 chr10 83714511 83714539 -61874749 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 391 319 151 0 chr10 83714610 83714776 -61874512 + MIR SINE MIR 59 249 -13 215 340 38 9 chr10 83714795 83714901 -61874387 - MIR SINE MIR -59 203 95 1497 216 92 12 chr10 83716071 83716497 -61872791 - MLT1C LTR MaLR -7 460 1 800 222 27 11 chr10 83716646 83716831 -61872457 + MER5A DNA MER1_type 1 188 -1 230 300 0 57 chr10 83716919 83717059 -61872229 + MER103 DNA DNA 1 132 -34 263 376 83 0 chr10 83717168 83717277 -61872011 - L2 LINE L2 -7 3265 3148 1763 198 24 3 chr10 83717277 83717610 -61871678 + MER58B DNA MER1_type 1 340 -1 409 303 97 48 chr10 83717748 83718235 -61871053 - L2 LINE L2 -217 3055 2543 184 319 0 72 chr10 83718372 83718441 -61870847 - L2 LINE L2 -20 3252 3189 206 352 80 0 chr10 83718593 83718681 -61870607 - L2 LINE L2 -202 3070 2976 204 284 159 23 chr10 83719070 83719158 -61870130 + L2 LINE L2 914 1013 -2301 207 0 0 0 chr10 83719594 83719617 -61869671 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 250 301 55 0 chr10 83722243 83722316 -61866972 - L2 LINE L2 -27 3286 3210 182 302 0 0 chr10 83722916 83722959 -61866329 + MIR3 SINE MIR 116 158 -50 480 303 110 23 chr10 83724117 83724256 -61865032 + MIR SINE MIR 1 167 -95 2216 123 7 0 chr10 83724256 83724566 -61864722 + AluSx SINE Alu 1 312 0 480 303 110 23 chr10 83724566 83724644 -61864644 + MIR SINE MIR 167 237 -25 227 222 191 56 chr10 83724727 83724853 -61864435 - MIR3 SINE MIR -23 185 43 256 235 82 41 chr10 83724865 83724963 -61864325 - MIR3 SINE MIR -21 187 86 2194 112 0 3 chr10 83725887 83726205 -61863083 + AluSx SINE Alu 1 317 0 249 238 61 0 chr10 83726449 83726525 -61862763 - MIR SINE MIR -59 149 69 269 241 330 0 chr10 83727494 83727606 -61861682 + MIR SINE MIR 32 180 -82 201 196 0 0 chr10 83727720 83727766 -61861522 + CT-rich Low_complexity Low_complexity 1 46 0 1419 132 5 5 chr10 83727839 83728052 -61861236 + AluSg/x SINE Alu 97 309 -3 553 283 127 20 chr10 83728164 83728494 -61860794 - L2 LINE L2 -249 3064 2688 253 220 30 126 chr10 83729599 83729795 -61859493 + MIR3 SINE MIR 35 208 0 585 235 0 0 chr10 83730476 83730655 -61858633 + (CA)n Simple_repeat Simple_repeat 2 180 0 218 213 21 0 chr10 83730878 83730925 -61858363 + MIR3 SINE MIR 110 157 -51 249 351 9 0 chr10 83730932 83731043 -61858245 - L3 LINE CR1 -20 1557 1446 245 275 197 26 chr10 83731265 83731458 -61857830 - MIR SINE MIR -28 234 9 312 319 30 22 chr10 83731480 83731615 -61857673 + MIR SINE MIR 119 254 -8 372 208 275 20 chr10 83732444 83732593 -61856695 + MER5A DNA MER1_type 3 189 0 756 140 93 7 chr10 83733415 83733565 -61855723 - MER53 DNA DNA -24 165 3 788 265 226 3 chr10 83733619 83733928 -61855360 - L2 LINE L2 -2 3311 2934 568 271 129 12 chr10 83733997 83734393 -61854895 - MLT1K LTR MaLR -55 533 10 1941 95 8 4 chr10 83734498 83734783 -61854505 + AluSx SINE Alu 31 316 0 600 202 9 0 chr10 83735938 83736047 -61853241 + MER81 DNA DNA 5 114 0 2124 90 17 0 chr10 83737591 83737881 -61851407 + AluY SINE Alu 1 295 -16 243 286 78 49 chr10 83737916 83738161 -61851127 + L1ME4a LINE L1 5616 5867 -254 2448 63 0 13 chr10 83738411 83738726 -61850562 - AluY SINE Alu 0 311 1 649 137 0 68 chr10 83738728 83738845 -61850443 - FRAM SINE Alu -14 162 54 1709 124 0 4 chr10 83738890 83739139 -61850149 - AluSq SINE Alu -63 250 3 354 270 104 78 chr10 83739155 83739385 -61849903 + L1ME4a LINE L1 5883 6118 -3 2529 117 17 6 chr10 83739569 83739929 -61849359 + THE1B LTR MaLR 1 364 0 185 333 36 24 chr10 83740329 83740413 -61848875 - L2 LINE L2 -182 3090 3006 194 266 229 18 chr10 83741741 83741850 -61847438 + MIR SINE MIR 115 246 -16 305 0 50 0 chr10 83742135 83742175 -61847113 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 3393 225 35 8 chr10 83742205 83743004 -61846284 + L1MEc LINE L1 58 878 -5518 238 167 0 93 chr10 83743899 83743953 -61845335 - L2 LINE L2 0 3313 3265 186 253 149 46 chr10 83744031 83744118 -61845170 - MIR SINE MIR -76 132 37 749 323 63 24 chr10 83745009 83745387 -61843901 + L2 LINE L2 2915 3307 -6 921 229 75 94 chr10 83745960 83746437 -61842851 + LTR33A LTR ERVL 2 469 -54 528 218 0 8 chr10 83746658 83746782 -61842506 + L1PB3 LINE L1 6031 6153 -1 1141 264 11 9 chr10 83747055 83747404 -61841884 + THE1A LTR MaLR 3 352 -3 8593 54 0 0 chr10 83847779 83848851 -61740437 + L1P LINE L1 1182 2253 -3893 633 297 89 35 chr10 83848972 83849440 -61739848 - L2 LINE L2 -253 3060 2566 219 163 20 41 chr10 83850253 83850302 -61738986 + MIR SINE MIR 215 262 0 291 309 60 47 chr10 83850570 83850719 -61738569 + MIR SINE MIR 45 195 -67 246 296 25 0 chr10 83851599 83851680 -61737608 + MER5B DNA MER1_type 1 83 -95 467 262 48 35 chr10 83851683 83851828 -61737460 + MER5B DNA MER1_type 6 152 -26 224 291 36 0 chr10 83851841 83851896 -61737392 + MER5A DNA MER1_type 83 139 -50 238 266 173 0 chr10 83854270 83854409 -61734879 + L1ME4a LINE L1 5932 6094 -27 875 102 86 0 chr10 83854449 83854577 -61734711 + MER85 DNA T2_type 1 139 0 279 157 0 0 chr10 83855786 83855837 -61733451 + (CA)n Simple_repeat Simple_repeat 2 52 0 597 256 153 74 chr10 83857163 83857593 -61731695 + MLT1J LTR MaLR 30 493 -18 212 348 22 45 chr10 83857885 83857974 -61731314 + MIR SINE MIR 19 105 -103 322 236 74 108 chr10 83858066 83858214 -61731074 - MIR SINE MIR -2 260 118 12262 44 2 15 chr10 83858541 83860099 -61729189 - L1P LINE L1 -948 5198 3661 2001 221 68 43 chr10 83860346 83860863 -61728425 + Charlie2b DNA MER1_type 164 693 -2089 357 225 11 0 chr10 83860922 83861011 -61728277 + L1ME3 LINE L1 6067 6156 -6 249 57 0 0 chr10 83861659 83861694 -61727594 + (CA)n Simple_repeat Simple_repeat 2 36 0 206 211 0 0 chr10 83862214 83862252 -61727036 - L2 LINE L2 -5 3308 3271 603 244 29 48 chr10 83862412 83862621 -61726667 + MIR SINE MIR 30 234 -28 518 262 19 55 chr10 83863158 83863467 -61725821 + L1MEd LINE L1 625 922 -5197 336 345 24 51 chr10 83863809 83864102 -61725186 - L1MEd LINE L1 -5560 559 275 1695 143 4 23 chr10 83864871 83864969 -61724319 + AluJb SINE Alu 38 136 -176 315 0 0 0 chr10 83864969 83865004 -61724284 + (TA)n Simple_repeat Simple_repeat 1 35 0 1695 143 4 23 chr10 83865004 83865170 -61724118 + AluJb SINE Alu 136 297 -15 661 284 128 23 chr10 83865202 83865508 -61723780 - MER46C DNA MER2_type 0 338 1 537 92 0 0 chr10 83866008 83866084 -61723204 + (AATAG)n Simple_repeat Simple_repeat 5 80 0 605 237 32 32 chr10 83866399 83866585 -61722703 + MER5A DNA MER1_type 1 186 -3 393 267 156 0 chr10 83866598 83866733 -61722555 - MER5B DNA MER1_type -19 159 4 191 307 59 59 chr10 83866802 83866955 -61722333 + L3 LINE CR1 1396 1548 -29 249 292 115 21 chr10 83867635 83867731 -61721557 - MIR SINE MIR -22 240 136 248 231 112 52 chr10 83867765 83867887 -61721401 - MIR SINE MIR -56 152 23 283 260 39 0 chr10 83868092 83868196 -61721092 + (TA)n Simple_repeat Simple_repeat 2 109 0 252 305 12 0 chr10 83868198 83868280 -61721008 + MER112 DNA MER1_type 73 155 -105 1228 128 11 11 chr10 83868308 83868487 -61720801 + AluSx SINE Alu 3 181 -131 216 0 0 0 chr10 83868795 83868819 -61720469 + (A)n Simple_repeat Simple_repeat 1 24 0 2330 82 26 0 chr10 83869129 83869434 -61719854 + AluSq SINE Alu 1 313 0 398 275 22 36 chr10 83869990 83870128 -61719160 + MIR SINE MIR 22 157 -105 8028 125 18 6 chr10 83870128 83871693 -61717595 + L1M1 LINE L1 4039 5628 -677 2141 115 16 0 chr10 83871840 83872144 -61717144 - AluSx SINE Alu -3 309 1 264 267 114 9 chr10 83872185 83872290 -61716998 + L2 LINE L2 3182 3297 -16 326 23 23 0 chr10 83872426 83872469 -61716819 + (TG)n Simple_repeat Simple_repeat 1 44 0 1969 143 0 17 chr10 83873076 83873377 -61715911 + AluSx SINE Alu 1 296 -16 208 231 0 0 chr10 83873483 83873522 -61715766 + (CACCAT)n Simple_repeat Simple_repeat 6 44 0 364 291 126 25 chr10 83873559 83873758 -61715530 - MIR SINE MIR -36 226 8 219 261 51 94 chr10 83873722 83873860 -61715428 + MIR SINE MIR 81 212 -50 * 2022 67 0 0 chr10 83875397 83875637 -61713651 + L1PA7 LINE L1 5908 6147 -7 506 264 68 34 chr10 83876602 83876837 -61712451 + L3 LINE CR1 1156 1398 -179 214 191 0 21 chr10 83876873 83876920 -61712368 + (CAT)n Simple_repeat Simple_repeat 3 48 0 383 231 108 0 chr10 83877620 83877750 -61711538 + L1MB2 LINE L1 5992 6135 -36 316 245 75 11 chr10 83877753 83877847 -61711441 + HAL1 LINE L1 2292 2391 -116 1243 257 86 51 chr10 83877847 83878136 -61711152 + L1MC4a LINE L1 5522 5799 -2009 270 0 0 0 chr10 83878136 83878166 -61711122 + (TC)n Simple_repeat Simple_repeat 2 31 0 * 375 23 0 0 chr10 83878165 83878209 -61711079 + (TG)n Simple_repeat Simple_repeat 1 44 0 1243 257 86 51 chr10 83878166 83878511 -61710777 + L1MC4a LINE L1 5799 6134 -1674 211 143 24 0 chr10 83878617 83878659 -61710629 + (TAA)n Simple_repeat Simple_repeat 1 43 0 507 330 64 17 chr10 83878692 83878928 -61710360 - MIR SINE MIR -12 250 4 403 290 31 16 chr10 83880475 83880655 -61708633 + MIR SINE MIR 6 183 -64 354 305 18 54 chr10 83880810 83880977 -61708311 - L2 LINE L2 -30 3242 3082 478 288 116 52 chr10 83881166 83882129 -61707159 + L1MC4a LINE L1 4100 5124 -1022 22 0 0 0 chr10 83882277 83882299 -61706989 + AT_rich Low_complexity Low_complexity 1 22 0 571 252 8 0 chr10 83882435 83882554 -61706734 - MLT1J2 LTR MaLR -266 184 65 664 300 70 70 chr10 83882689 83883263 -61706025 + L1MC4a LINE L1 5291 5864 -1944 719 219 39 61 chr10 83883889 83884016 -61705272 + L1MC5 LINE L1 7659 7787 -174 2049 127 10 3 chr10 83884016 83884307 -61704981 + AluSq SINE Alu 1 293 -20 719 219 39 61 chr10 83884307 83884458 -61704830 + L1MC5 LINE L1 7787 7931 -30 252 86 0 0 chr10 83884844 83884879 -61704409 + (TCC)n Simple_repeat Simple_repeat 3 37 0 2425 120 128 13 chr10 83885269 83885653 -61703635 + MSTA LTR MaLR 1 428 0 746 207 0 30 chr10 83885834 83885917 -61703371 - MER69 DNA AcHobo -374 2152 2075 4204 142 24 2 chr10 83885917 83886538 -61702750 + MER41B LTR ERV1 1 635 0 746 207 0 30 chr10 83886538 83886623 -61702665 - MER69 DNA AcHobo -451 2075 1989 230 62 0 0 chr10 83886623 83886655 -61702633 - L1MB7 LINE L1 -59 6125 6094 1891 104 4 11 chr10 83887284 83887544 -61701744 + AluSq SINE Alu 1 258 -55 371 298 95 30 chr10 83887746 83887914 -61701374 + MIR3 SINE MIR 1 179 -29 374 162 0 54 chr10 83888004 83888078 -61701210 + MIR SINE MIR 82 151 -111 2070 145 0 7 chr10 83888097 83888393 -61700895 - AluSx SINE Alu -18 294 1 599 195 39 16 chr10 83888448 83888576 -61700712 - FLAM_A SINE Alu 0 142 12 628 198 43 9 chr10 83888471 83888587 -61700701 - FLAM_A SINE Alu -12 121 2 246 176 0 0 chr10 83888666 83888717 -61700571 + GA-rich Low_complexity Low_complexity 2 52 0 287 264 42 0 chr10 83888782 83888854 -61700434 + L1MC5 LINE L1 7831 7905 -56 308 303 37 9 chr10 83888930 83889039 -61700249 + L1ME3A LINE L1 1234 1345 -5195 1088 235 143 63 chr10 83889065 83889928 -61699360 + L1ME3A LINE L1 5430 6356 -208 325 223 28 128 chr10 83889983 83890087 -61699201 + L1ME3A LINE L1 6359 6433 -131 1739 51 0 0 chr10 83890087 83890301 -61698987 + L1PA4 LINE L1 5939 6152 -3 325 223 28 128 chr10 83890301 83890407 -61698881 + L1ME3A LINE L1 6433 6548 -16 3881 209 73 46 chr10 83890407 83891445 -61697843 + Charlie2a DNA MER1_type 1523 2532 -330 2325 84 0 3 chr10 83891445 83891754 -61697534 - AluSc SINE Alu -1 308 1 3881 209 73 46 chr10 83891754 83891826 -61697462 + Charlie2a DNA MER1_type 2532 2601 -261 1977 123 3 3 chr10 83891826 83892118 -61697170 - AluJb SINE Alu -20 292 1 3881 209 73 46 chr10 83892118 83892267 -61697021 + Charlie2a DNA MER1_type 2601 2817 -45 643 275 21 21 chr10 83892271 83892464 -61696824 - MLT1J LTR MaLR -52 459 267 276 289 126 7 chr10 83892514 83892649 -61696639 - MLT1J LTR MaLR -358 153 3 225 277 152 9 chr10 83892930 83893042 -61696246 + MIR SINE MIR 19 146 -62 302 237 275 15 chr10 83893290 83893421 -61695867 + MLT1K LTR MaLR 374 538 -50 1605 161 142 20 chr10 83893421 83893774 -61695514 + MSTD LTR MaLR 1 396 0 325 318 99 31 chr10 83893856 83894048 -61695240 - MIR SINE MIR -56 206 2 2371 151 3 0 chr10 83894115 83894465 -61694823 + MLT1A1 LTR MaLR 3 353 -12 4756 118 36 17 chr10 83894899 83895726 -61693562 + L1MA2 LINE L1 5460 6302 -2 288 244 79 79 chr10 83895752 83895849 -61693439 + MIR SINE MIR 136 235 -27 2163 121 50 19 chr10 83895849 83896212 -61693076 - THE1C LTR MaLR -1 374 1 288 244 79 79 chr10 83896212 83896241 -61693047 + MIR SINE MIR 234 262 0 1702 173 16 10 chr10 83896583 83896889 -61692399 - AluJo SINE Alu 0 312 5 222 236 124 22 chr10 83897121 83897210 -61692078 - MIR3 SINE MIR -29 179 82 329 330 174 4 chr10 83898417 83898647 -61690641 + L2 LINE L2 2966 3234 -38 195 100 0 0 chr10 83898665 83898695 -61690593 + (TGAA)n Simple_repeat Simple_repeat 4 33 0 755 309 8 12 chr10 83900057 83900300 -61688988 - MIR SINE MIR -17 245 4 384 243 45 9 chr10 83900304 83900415 -61688873 - MIR SINE MIR -91 171 57 2463 58 0 0 chr10 83900468 83900778 -61688510 + AluY SINE Alu 1 310 -1 219 311 97 0 chr10 83901760 83901863 -61687425 - MIR3 SINE MIR -22 186 74 192 77 0 0 chr10 83902050 83902076 -61687212 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 208 204 0 41 chr10 83902086 83902135 -61687153 - L3 LINE CR1 -22 1555 1509 693 188 101 7 chr10 83902486 83902624 -61686664 - MER5A DNA MER1_type -36 153 3 555 320 64 87 chr10 83902865 83903428 -61685860 - L3 LINE CR1 -86 1491 942 341 290 110 7 chr10 83903839 83903984 -61685304 - MIR3 SINE MIR -7 201 42 726 191 89 80 chr10 83904670 83904694 -61684594 - MIR SINE MIR -24 238 216 2545 133 26 19 chr10 83904694 83905123 -61684165 + MSTB1 LTR MaLR 1 432 0 726 191 89 80 chr10 83905123 83905323 -61683965 - MIR SINE MIR -46 216 12 2063 125 0 3 chr10 83906093 83906390 -61682898 + AluSx SINE Alu 1 296 -16 440 292 126 20 chr10 83906395 83906909 -61682379 + L1MEd LINE L1 1248 1799 -4585 338 351 65 51 chr10 83906954 83907236 -61682052 + L1MEd LINE L1 2036 2326 -4237 2112 103 6 34 chr10 83907236 83907557 -61681731 + AluSp SINE Alu 1 312 -1 338 351 65 51 chr10 83907557 83907644 -61681644 + L1MEd LINE L1 2326 2410 -4153 283 235 162 13 chr10 83907664 83907843 -61681445 + L1MEd LINE L1 2383 2598 -3784 250 289 125 39 chr10 83908243 83908347 -61680941 - MLT1K LTR MaLR -347 241 129 25 0 0 0 chr10 83908351 83908376 -61680912 + AT_rich Low_complexity Low_complexity 1 25 0 346 264 83 8 chr10 83908436 83908557 -61680731 - MIR SINE MIR -86 176 47 278 284 171 70 chr10 83909297 83909642 -61679646 - L2 LINE L2 -3 3269 2890 836 149 38 115 chr10 83909661 83909734 -61679554 + MER20 DNA MER1_type 1 78 -141 4755 136 27 13 chr10 83909734 83910506 -61678782 - LTR39 LTR ERV1 0 783 1 836 149 38 115 chr10 83910506 83910667 -61678621 + MER20 DNA MER1_type 78 217 -2 1877 145 90 32 chr10 83910926 83910987 -61678301 + MLT1A1 LTR MaLR 1 57 -308 5736 67 21 3 chr10 83910987 83911739 -61677549 - MER4E LTR ERV1 0 766 1 1877 145 90 32 chr10 83911739 83912022 -61677266 + MLT1A1 LTR MaLR 57 365 0 1822 135 0 33 chr10 83912056 83912359 -61676929 - MER4A LTR ERV1 0 664 372 2171 159 57 26 chr10 83912387 83912945 -61676343 - LTR10E LTR ERV1 0 633 1 614 93 31 21 chr10 83912971 83913068 -61676220 - MER4A LTR ERV1 -566 98 1 1557 158 39 3 chr10 83913656 83913940 -61675348 - AluSx SINE Alu -16 296 3 3607 190 49 57 chr10 83913962 83914798 -61674490 + MER21B LTR ERV1 12 840 -23 213 224 0 132 chr10 83918700 83918776 -61670512 + MIR SINE MIR 123 188 -74 2082 129 7 0 chr10 83918781 83919091 -61670197 + AluSx SINE Alu 1 312 0 1470 147 53 23 chr10 83920004 83920304 -61668984 + L1MA8 LINE L1 5980 6288 -3 2171 100 7 7 chr10 83920583 83920718 -61668570 + AluSx SINE Alu 1 135 -177 2498 53 0 0 chr10 83920718 83921017 -61668271 + AluY SINE Alu 1 299 -12 2171 100 7 7 chr10 83921017 83921181 -61668107 + AluSx SINE Alu 134 300 -12 226 158 26 0 chr10 83921190 83921228 -61668060 - MIR SINE MIR -111 151 113 384 258 110 86 chr10 83921368 83921694 -61667594 - L1ME4a LINE L1 -1 6120 5787 22 35 0 0 chr10 83921724 83921753 -61667535 + AT_rich Low_complexity Low_complexity 1 29 0 2807 178 14 8 chr10 83922786 83923286 -61666002 + L1PA16 LINE L1 5654 6156 -10 788 144 0 144 chr10 83923507 83923660 -61665628 - MER50 LTR ERV1 -130 604 485 2823 82 3 11 chr10 83923660 83924025 -61665263 + THE1B LTR MaLR 3 364 0 788 144 0 144 chr10 83924025 83924072 -61665216 - MER50 LTR ERV1 -249 485 433 * 1232 134 40 5 chr10 83924064 83924287 -61665001 - MER50 LTR ERV1 -503 231 1 2387 86 10 6 chr10 83924289 83924603 -61664685 - MER50-int LTR ERV1 -10 7195 6881 612 181 105 0 chr10 83926150 83926317 -61662971 + MER113 DNA MER1_type? 31 215 -306 1506 202 30 37 chr10 83926317 83926682 -61662606 - Tigger7 DNA MER2_type 0 2491 1 28 48 0 0 chr10 83926682 83926724 -61662564 + AT_rich Low_complexity Low_complexity 1 42 0 499 293 25 0 chr10 83926732 83926889 -61662399 + MER113 DNA MER1_type? 186 346 -175 2006 105 0 25 chr10 83928716 83929001 -61660287 + AluSg SINE Alu 1 278 -32 195 42 0 0 chr10 83929005 83929029 -61660259 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 630 270 90 9 chr10 83929032 83929254 -61660034 - MER112 DNA MER1_type -20 240 1 248 246 236 9 chr10 83929254 83929364 -61659924 - MIR3 SINE MIR -48 160 26 208 309 59 0 chr10 83929978 83930046 -61659242 - MIR SINE MIR -1 261 190 606 286 73 15 chr10 83930151 83930357 -61658931 - MIR SINE MIR -43 219 2 475 307 17 34 chr10 83930738 83930917 -61658371 - MIR3 SINE MIR -8 200 25 349 229 201 62 chr10 83932675 83932854 -61656434 + MIR SINE MIR 59 262 0 1927 130 0 33 chr10 83933111 83933412 -61655876 + AluSx SINE Alu 1 291 -21 535 291 56 34 chr10 83934338 83934572 -61654716 + MIR SINE MIR 12 250 -12 223 341 74 0 chr10 83934714 83934849 -61654439 - L3 LINE CR1 -243 1334 1190 232 236 40 0 chr10 83935662 83935790 -61653498 + GA-rich Low_complexity Low_complexity 1 133 0 22 0 0 0 chr10 83936600 83936622 -61652666 + AT_rich Low_complexity Low_complexity 1 22 0 939 158 0 0 chr10 83936630 83936776 -61652512 + AluJb SINE Alu 1 146 -166 17450 23 0 0 chr10 83936776 83939571 -61649717 + L1PA3 LINE L1 3361 6155 0 1143 139 17 0 chr10 83939591 83939764 -61649524 + AluJb SINE Alu 120 295 -17 412 252 105 47 chr10 83939850 83940108 -61649180 - L1MEd LINE L1 -5166 953 681 317 310 70 35 chr10 83940475 83940617 -61648671 + MIR3 SINE MIR 46 192 -16 261 295 8 70 chr10 83940610 83940739 -61648549 - L2 LINE L2 -5 3308 3188 * 1616 191 64 78 chr10 83940989 83941047 -61648241 - MER54A LTR ERVL 0 901 844 1974 109 11 0 chr10 83941047 83941314 -61647974 - AluSx SINE Alu -1 311 42 1616 191 64 78 chr10 83941314 83941679 -61647609 - MER54A LTR ERVL -57 844 484 1058 206 32 51 chr10 83942260 83942430 -61646858 + MIR SINE MIR 6 171 -91 4100 39 16 4 chr10 83942430 83942914 -61646374 + LTR2B LTR ERV1 1 490 0 1058 206 32 51 chr10 83942914 83942996 -61646292 + MIR SINE MIR 171 253 -9 608 245 26 20 chr10 83943083 83943234 -61646054 + L2 LINE L2 3162 3313 0 274 116 23 0 chr10 83943252 83943295 -61645993 - L2 LINE L2 -8 3305 3262 2527 57 7 3 chr10 83943607 83943907 -61645381 - AluY SINE Alu -10 301 1 2998 146 37 12 chr10 83944256 83944819 -61644469 + L1MB7 LINE L1 5409 5985 -199 246 296 121 44 chr10 83945796 83946093 -61643195 - MER113 DNA MER1_type? -92 429 110 318 50 0 0 chr10 83946196 83946236 -61643052 + (CA)n Simple_repeat Simple_repeat 2 41 0 974 206 164 64 chr10 83947351 83947681 -61641607 + MLT1A1 LTR MaLR 3 365 0 453 185 15 77 chr10 83947943 83948073 -61641215 + L1ME2 LINE L1 5938 6059 -105 536 189 51 0 chr10 83948140 83948265 -61641023 + MER3 DNA MER1_type 1 2345 0 230 226 11 75 chr10 83948320 83948413 -61640875 - MIR SINE MIR -125 137 51 246 156 0 0 chr10 83948691 83948736 -61640552 + CT-rich Low_complexity Low_complexity 2 46 0 431 330 69 21 chr10 83948760 83948948 -61640340 + MIR SINE MIR 12 208 -54 306 0 0 0 chr10 83948953 83948987 -61640301 + (CAT)n Simple_repeat Simple_repeat 2 35 0 324 0 0 0 chr10 83949455 83949491 -61639797 + (TG)n Simple_repeat Simple_repeat 1 36 0 189 0 0 0 chr10 83949490 83949511 -61639777 + (GA)n Simple_repeat Simple_repeat 1 21 0 * 218 316 43 17 chr10 83949530 83949647 -61639641 - MIR SINE MIR -57 205 86 458 275 94 69 chr10 83950170 83950403 -61638885 - MIR SINE MIR -1 261 23 414 253 91 52 chr10 83950922 83951027 -61638261 - MIR SINE MIR -32 230 116 2171 108 50 66 chr10 83951027 83951408 -61637880 - THE1C LTR MaLR 0 375 1 414 253 91 52 chr10 83951408 83951456 -61637832 - MIR SINE MIR -146 116 71 719 194 19 58 chr10 83951660 83951843 -61637445 + L1MA4 LINE L1 6052 6224 -76 2564 57 0 0 chr10 83951843 83952139 -61637149 + AluY SINE Alu 1 296 -15 719 194 19 58 chr10 83952139 83952213 -61637075 + L1MA4 LINE L1 6224 6299 -1 270 217 72 14 chr10 83952682 83952751 -61636537 - MIR SINE MIR -22 240 168 1500 147 0 22 chr10 83953130 83953355 -61635933 + AluJo SINE Alu 1 220 -92 313 289 72 15 chr10 83953443 83953729 -61635559 + MER113 DNA MER1_type? 175 521 0 352 286 17 84 chr10 83955646 83955824 -61633464 - MIR SINE MIR -28 234 69 1906 56 0 13 chr10 83955865 83956099 -61633189 - AluSg1 SINE Alu -78 231 1 205 276 17 0 chr10 83956322 83956380 -61632908 + (CATA)n Simple_repeat Simple_repeat 3 61 0 615 267 68 6 chr10 83956380 83956541 -61632747 - MIR SINE MIR -69 193 23 313 326 118 7 chr10 83957021 83957156 -61632132 + MIR3 SINE MIR 33 182 -26 384 295 85 65 chr10 83957488 83957688 -61631600 + L2 LINE L2 3030 3233 -39 184 256 205 0 chr10 83957841 83957958 -61631330 - L2 LINE L2 -213 3059 2919 931 239 17 4 chr10 83958138 83958368 -61630920 - MER58 DNA MER1_type -2149 271 39 332 378 19 6 chr10 83958390 83958546 -61630742 - L2 LINE L2 -558 2756 2599 345 298 24 48 chr10 83958828 83958855 -61630433 + L1MC4 LINE L1 7786 7812 -230 2540 70 0 0 chr10 83958855 83959157 -61630131 + AluY SINE Alu 1 302 -9 345 298 24 48 chr10 83959157 83959253 -61630035 + L1MC4 LINE L1 7812 7906 -136 436 219 114 24 chr10 83959611 83959734 -61629554 - MIR SINE MIR -17 245 112 594 274 26 7 chr10 83959734 83959887 -61629401 + MER45A DNA AcHobo 20 175 -3 2383 69 14 0 chr10 83960071 83960360 -61628928 - AluY SINE Alu -18 293 1 801 251 34 0 chr10 83960943 83961118 -61628170 + MIR SINE MIR 23 203 -59 1106 36 0 29 chr10 83961206 83961345 -61627943 + L1PA8 LINE L1 6031 6165 -7 2307 94 0 13 chr10 83963113 83963412 -61625876 - AluSc SINE Alu -14 295 1 198 358 83 0 chr10 83963853 83963973 -61625315 - L2 LINE L2 -22 3291 3162 525 323 24 0 chr10 83963990 83964157 -61625131 + MIR SINE MIR 37 207 -55 208 170 0 43 chr10 83964260 83964307 -61624981 + L2 LINE L2 3215 3259 -13 597 146 0 0 chr10 83965806 83965895 -61623393 + 5S rRNA rRNA 2 90 -31 192 220 0 60 chr10 83966513 83966563 -61622725 - L2 LINE L2 -1 3271 3225 326 336 46 23 chr10 83966742 83966873 -61622415 - MER5A DNA MER1_type -1 188 55 210 316 53 13 chr10 83967428 83967504 -61621784 - MIR SINE MIR -85 177 99 266 264 146 111 chr10 83967584 83967686 -61621602 - L2 LINE L2 -8 3264 3154 1002 232 52 0 chr10 83967686 83967897 -61621391 - MER58A DNA MER1_type -1 223 2 266 264 146 111 chr10 83967897 83967938 -61621350 - L2 LINE L2 -118 3154 3116 197 333 140 0 chr10 83968039 83968132 -61621156 + MIR3 SINE MIR 94 199 -9 1356 83 41 23 chr10 83968322 83968540 -61620748 - pTR5 LTR ERV1 -2046 392 171 287 208 52 0 chr10 83968559 83968636 -61620652 - LTR30 LTR ERV1 -98 624 544 3011 127 24 32 chr10 83968640 83969517 -61619771 - pTR5 LTR ERV1 -417 2021 735 830 218 5 56 chr10 83970197 83970394 -61618894 + MER5A DNA MER1_type 2 188 -1 267 286 9 71 chr10 83970614 83970726 -61618562 - L3 LINE CR1 -1 1576 1472 342 264 58 58 chr10 83970758 83970913 -61618375 - L2 LINE L2 0 3313 3159 1214 243 70 5 chr10 83970919 83971290 -61617998 + L1MD3 LINE L1 7562 7956 -39 306 355 37 0 chr10 83972047 83972154 -61617134 + MIR3 SINE MIR 88 198 -10 236 296 10 51 chr10 83972337 83972435 -61616853 - MIR SINE MIR -50 212 119 300 245 11 133 chr10 83973218 83973406 -61615882 + MIR SINE MIR 52 216 -46 340 228 66 6 chr10 83973475 83973737 -61615551 + MLT1J2 LTR MaLR 52 445 -5 2127 111 3 3 chr10 83973820 83974108 -61615180 + AluSx SINE Alu 1 288 -24 318 26 0 0 chr10 83976951 83976990 -61612298 + (TG)n Simple_repeat Simple_repeat 2 40 0 413 264 0 9 chr10 83977640 83977750 -61611538 + MIR3 SINE MIR 87 195 -13 2272 107 0 3 chr10 83978432 83978732 -61610556 - AluSc SINE Alu -10 299 1 341 373 66 18 chr10 83978762 83978990 -61610298 + MIR SINE MIR 23 261 -1 339 269 11 11 chr10 83979727 83979820 -61609468 + MIR SINE MIR 84 176 -86 1916 164 10 10 chr10 83980637 83980942 -61608346 - AluJb SINE Alu -7 305 1 422 222 236 7 chr10 83980945 83981089 -61608199 - MER5A DNA MER1_type -9 180 4 199 156 0 44 chr10 83981777 83981822 -61607466 - L3b LINE CR1 -169 1414 1372 213 355 92 0 chr10 83981986 83982062 -61607226 - L2 LINE L2 -22 3250 3168 1778 124 55 35 chr10 83983102 83983392 -61605896 - AluSx SINE Alu -15 297 2 206 219 0 0 chr10 83984758 83984799 -61604489 + GA-rich Low_complexity Low_complexity 4 44 0 324 226 12 143 chr10 83985623 83985705 -61603583 - L1ME4a LINE L1 0 6121 6071 3688 148 40 42 chr10 83985705 83986378 -61602910 + L1MB2 LINE L1 5450 6123 -48 2255 58 50 0 chr10 83986378 83986655 -61602633 - AluY SINE Alu -20 291 1 3688 148 40 42 chr10 83986655 83986702 -61602586 + L1MB2 LINE L1 6123 6169 -2 324 226 12 143 chr10 83986702 83986787 -61602501 - L1ME4a LINE L1 -50 6071 5976 2109 141 0 22 chr10 83988040 83988353 -61600935 - AluSx SINE Alu -6 306 1 507 263 20 13 chr10 83988982 83989134 -61600154 - MIR SINE MIR 0 262 110 936 221 89 4 chr10 83989158 83989393 -61599895 - MIR SINE MIR -4 258 4 198 383 0 17 chr10 83989556 83989616 -61599672 - L3b LINE CR1 -15 1568 1510 260 221 47 58 chr10 83989670 83989756 -61599532 + MER91B DNA MER1_type 8 92 -98 1404 120 8 68 chr10 83989885 83990119 -61599169 - AluJb SINE Alu -91 221 2 243 146 0 0 chr10 83990219 83990260 -61599028 + (TG)n Simple_repeat Simple_repeat 1 41 0 389 198 99 22 chr10 83990827 83990918 -61598370 + MER91C DNA MER1_type 33 130 -10 337 289 40 83 chr10 83992147 83992375 -61596913 + MLT1H1 LTR MaLR 1 218 -324 333 62 0 0 chr10 83992420 83992468 -61596820 + (GA)n Simple_repeat Simple_repeat 1 48 0 560 187 52 33 chr10 83992486 83992671 -61596617 + MLT1H1 LTR MaLR 334 555 0 224 325 60 60 chr10 83992699 83992899 -61596389 + L2 LINE L2 2806 3005 -267 587 282 35 0 chr10 83992899 83993041 -61596247 + MER63 DNA MER1_type 1 773 -289 234 263 0 0 chr10 83993041 83993098 -61596190 - MIR SINE MIR -109 153 97 1025 254 77 36 chr10 83993438 83993856 -61595432 - MLT1J2 LTR MaLR 0 450 16 774 254 27 47 chr10 83993950 83994206 -61595082 - MIR SINE MIR -10 252 2 577 338 6 0 chr10 83994752 83994909 -61594379 + MIR SINE MIR 1 158 -104 2211 98 3 0 chr10 83994947 83995243 -61594045 - AluSq SINE Alu -16 297 1 215 323 129 0 chr10 83995290 83995383 -61593905 + MIR SINE MIR 158 262 0 460 306 8 0 chr10 83995679 83995813 -61593475 + MIR SINE MIR 50 184 -78 225 311 27 0 chr10 83996193 83996267 -61593021 + MIR3 SINE MIR 117 192 -16 272 319 103 9 chr10 83997023 83997139 -61592149 + MIR SINE MIR 20 146 -116 284 345 34 8 chr10 83997394 83997513 -61591775 + L2 LINE L2 3150 3271 -1 253 336 172 0 chr10 83998529 83998663 -61590625 - MIR SINE MIR -6 256 100 323 233 111 0 chr10 83999083 83999173 -61590115 - L1ME2 LINE L1 0 6164 6065 540 289 63 25 chr10 84000203 84000529 -61588759 - MLT1L LTR MaLR -4 611 249 765 229 34 17 chr10 84000675 84000850 -61588438 - MIR SINE MIR -72 190 13 1400 136 64 34 chr10 84000894 84001159 -61588129 - L1MB7 LINE L1 -41 6143 5871 258 291 138 50 chr10 84001395 84001715 -61587573 - L2 LINE L2 -28 3285 2938 5855 130 15 13 chr10 84002047 84002995 -61586293 - L1MA8 LINE L1 -14 6277 5328 208 179 0 0 chr10 84003069 84003108 -61586180 - L2 LINE L2 -66 3206 3168 271 311 87 25 chr10 84003247 84003294 -61585994 - L2 LINE L2 -205 3067 3024 1783 166 0 3 chr10 84003294 84003590 -61585698 + AluJb SINE Alu 1 295 -17 271 311 87 25 chr10 84003590 84003738 -61585550 - L2 LINE L2 -248 3024 2860 199 338 39 0 chr10 84003789 84003866 -61585422 + L2 LINE L2 3153 3232 -40 2142 186 44 36 chr10 84003898 84004398 -61584890 - MLT1D LTR MaLR -1 504 1 1534 167 84 4 chr10 84005144 84005419 -61583869 - AluJo SINE Alu -15 297 1 316 272 76 0 chr10 84005818 84005910 -61583378 + MIR SINE MIR 49 147 -115 1220 157 126 57 chr10 84007084 84007346 -61581942 - AluJo SINE Alu -32 280 1 237 281 32 29 chr10 84007503 84007584 -61581704 + MIR SINE MIR 3 83 -125 681 280 169 9 chr10 84007746 84007971 -61581317 - MIR SINE MIR 0 262 2 1353 179 54 18 chr10 84009186 84009465 -61579823 - L1MB7 LINE L1 -1 6183 5895 189 256 0 0 chr10 84010785 84010824 -61578464 - L2 LINE L2 -21 3292 3254 297 277 21 21 chr10 84010858 84010952 -61578336 + MIR3 SINE MIR 7 100 -108 425 136 0 12 chr10 84010952 84011019 -61578269 + (TG)n Simple_repeat Simple_repeat 2 69 -12 2030 99 11 0 chr10 84011019 84011302 -61577986 - AluSp SINE Alu -27 286 1 425 136 0 12 chr10 84011302 84011315 -61577973 + (TG)n Simple_repeat Simple_repeat 69 81 0 255 288 17 0 chr10 84011559 84011618 -61577670 - L3 LINE CR1 -124 1453 1394 564 321 44 34 chr10 84012035 84012536 -61576752 + L1M4 LINE L1 3871 4376 -1770 272 266 36 28 chr10 84012660 84012815 -61576473 - MIR SINE MIR -67 141 11 1014 267 141 44 chr10 84013365 84013498 -61575790 - L2 LINE L2 -1 3312 3193 2280 97 3 0 chr10 84013498 84013809 -61575479 + AluSx SINE Alu 1 312 0 1014 267 141 44 chr10 84013809 84014176 -61575112 - L2 LINE L2 -120 3193 2771 1194 82 10 72 chr10 84014258 84014466 -61574822 - L1MA4A LINE L1 -8 6295 6101 346 273 105 28 chr10 84014509 84014779 -61574509 - L1P4 LINE L1 -299 5822 5548 1002 276 114 17 chr10 84015329 84015749 -61573539 - L1MB7 LINE L1 -2053 5755 5295 1786 101 59 18 chr10 84015819 84016105 -61573183 + AluSg SINE Alu 1 298 -12 483 279 89 76 chr10 84016119 84016697 -61572591 - L1MDa LINE L1 -1182 1719 1279 2090 114 3 3 chr10 84017056 84017364 -61571924 + AluSq SINE Alu 1 308 -5 295 293 37 0 chr10 84017705 84017787 -61571501 + MIR SINE MIR 81 165 -97 812 235 104 0 chr10 84017872 84018097 -61571191 - MIR SINE MIR -8 254 5 1735 135 0 4 chr10 84018372 84018639 -61570649 - AluSx SINE Alu -8 304 39 1870 89 107 4 chr10 84019143 84019423 -61569865 + AluSg1 SINE Alu 1 309 0 242 235 92 42 chr10 84019423 84019542 -61569746 + L1MEd LINE L1 815 939 -5266 1785 129 161 75 chr10 84019610 84019982 -61569306 - MER4A LTR ERV1 0 664 261 558 176 20 10 chr10 84019979 84020081 -61569207 - MER4A LTR ERV1 -561 103 1 * 324 183 0 33 chr10 84020082 84020142 -61569146 + L1MEd LINE L1 978 1035 -5180 322 200 14 0 chr10 84020165 84020235 -61569053 - L1MB8 LINE L1 -1 6177 6107 337 249 63 118 chr10 84020735 84020807 -61568481 + L1MEd LINE L1 1262 1336 -5060 2135 113 3 0 chr10 84020807 84021108 -61568180 + AluSg SINE Alu 1 302 -8 337 249 63 118 chr10 84021108 84021350 -61567938 + L1MEd LINE L1 1336 1590 -4806 4371 82 39 8 chr10 84021350 84021937 -61567351 - LTR14B LTR ERVK 0 608 4 337 249 63 118 chr10 84021937 84021955 -61567333 + L1MEd LINE L1 1590 1607 -4789 2072 165 81 8 chr10 84021955 84022349 -61566939 + MSTA LTR MaLR 3 425 -3 9791 157 27 6 chr10 84022352 84023969 -61565319 + MSTA-int LTR MaLR 1 1651 0 2013 144 79 53 chr10 84023969 84024146 -61565142 + MSTA LTR MaLR 1 172 -256 2184 86 10 0 chr10 84024146 84024437 -61564851 + AluSq SINE Alu 1 294 -19 2013 144 79 53 chr10 84024437 84024676 -61564612 + MSTA LTR MaLR 172 428 0 337 249 63 118 chr10 84024676 84024794 -61564494 + L1MEd LINE L1 1607 1694 -4702 303 271 65 37 chr10 84024806 84024913 -61564375 - L1MC4 LINE L1 -1319 6723 6614 231 286 23 15 chr10 84024922 84025055 -61564233 + (CATA)n Simple_repeat Simple_repeat 3 136 0 * 289 219 42 0 chr10 84024960 84025056 -61564232 + (TA)n Simple_repeat Simple_repeat 2 101 0 631 250 95 46 chr10 84025139 84025191 -61564097 - L1ME LINE L1 -4594 2528 2480 2298 156 41 17 chr10 84025191 84025609 -61563679 - MSTA LTR MaLR 0 428 1 631 250 95 46 chr10 84025609 84025968 -61563320 - L1ME LINE L1 -4642 2480 2097 381 238 77 55 chr10 84025946 84026270 -61563018 - L1ME LINE L1 -5198 1733 1417 * 234 0 0 0 chr10 84026270 84026296 -61562992 + (TTG)n Simple_repeat Simple_repeat 2 27 0 381 238 77 55 chr10 84026296 84026331 -61562957 - L1ME LINE L1 -5514 1417 1398 2249 98 0 0 chr10 84026331 84026627 -61562661 - AluSx SINE Alu -16 296 1 361 289 83 83 chr10 84026797 84027230 -61562058 - L1ME LINE L1 -5970 453 21 1910 248 79 19 chr10 84028127 84028973 -61560315 + L1M4 LINE L1 3035 3931 -2215 1855 122 8 0 chr10 84029013 84029276 -61560012 + AluJb SINE Alu 4 268 -44 2347 94 0 0 chr10 84029968 84030277 -61559011 + AluSg SINE Alu 1 309 -1 1599 73 0 23 chr10 84034520 84034740 -61554548 - AluY SINE Alu 0 311 97 9233 32 5 3 chr10 84034740 84035809 -61553479 + MER11C LTR ERVK 1 1071 0 800 90 0 0 chr10 84035809 84035909 -61553379 - AluY SINE Alu -209 102 3 392 296 41 36 chr10 84036409 84036605 -61552683 - MIR SINE MIR -44 218 22 180 0 0 0 chr10 84037407 84037427 -61551861 + (A)n Simple_repeat Simple_repeat 1 20 0 2039 153 132 3 chr10 84037706 84038085 -61551203 + MSTA LTR MaLR 1 428 0 3419 178 2 2 chr10 84038085 84038674 -61550614 + MSTA-int LTR MaLR 1 589 -1062 628 205 0 16 chr10 84038695 84038817 -61550471 + MSTA-int LTR MaLR 554 673 -978 4189 109 5 7 chr10 84038817 84039433 -61549855 + L1PB1 LINE L1 5537 6151 0 358 81 48 0 chr10 84039439 84039501 -61549787 + GA-rich Low_complexity Low_complexity 3 67 0 652 236 46 61 chr10 84039503 84039829 -61549459 + L1M4 LINE L1 4146 4466 -1680 628 184 20 54 chr10 84039829 84039976 -61549312 + FLAM_A SINE Alu 1 142 0 1452 169 28 58 chr10 84039979 84040304 -61548984 + L1M4 LINE L1 4461 4775 -1371 * 2186 227 78 4 chr10 84040303 84040997 -61548291 - ERVL LTR ERVL -1175 4589 3751 2134 88 3 0 chr10 84041051 84041335 -61547953 + AluY SINE Alu 1 285 -26 36 0 0 0 chr10 84041335 84041371 -61547917 + AT_rich Low_complexity Low_complexity 1 36 0 900 224 48 33 chr10 84041709 84041803 -61547485 + L1MC4 LINE L1 7578 7669 -373 1946 168 22 38 chr10 84041803 84042172 -61547116 + MLT1A1 LTR MaLR 3 365 0 900 224 48 33 chr10 84042172 84042349 -61546939 + L1MC4 LINE L1 7669 7853 -189 1996 90 0 84 chr10 84042550 84042883 -61546405 - AluSx SINE Alu -5 307 3 1603 147 62 37 chr10 84042903 84043277 -61546011 - Tigger3(Golem) DNA MER2_type -1 3028 1 552 225 42 7 chr10 84043279 84043421 -61545867 - L1MC4a LINE L1 -1945 5863 5717 1988 99 14 0 chr10 84043634 84043918 -61545370 + AluSc SINE Alu 21 308 -1 442 320 44 53 chr10 84044681 84044909 -61544379 + LTR67 LTR ERVL 225 450 -107 257 317 186 18 chr10 84045106 84045273 -61544015 - MLT1J1 LTR MaLR -248 198 4 463 266 0 0 chr10 84045322 84045431 -61543857 + LTR67 LTR ERVL 447 555 -2 633 257 119 19 chr10 84045462 84045672 -61543616 + MIR SINE MIR 32 262 0 938 153 0 0 chr10 84045829 84045973 -61543315 - FRAM SINE Alu -17 159 16 2152 114 3 0 chr10 84046718 84047017 -61542271 + AluSq SINE Alu 1 300 -13 301 281 59 59 chr10 84047325 84047478 -61541810 + MIR SINE MIR 36 188 -74 372 59 0 0 chr10 84047478 84047529 -61541759 + (CA)n Simple_repeat Simple_repeat 2 52 0 231 36 0 0 chr10 84047863 84047891 -61541397 + (TG)n Simple_repeat Simple_repeat 1 28 0 313 244 23 12 chr10 84048003 84048089 -61541199 + MER58C DNA MER1_type 39 125 -90 338 220 77 0 chr10 84048130 84048221 -61541067 + MER58C DNA MER1_type 99 196 -19 5088 229 61 79 chr10 84048242 84048416 -61540872 + L1M4 LINE L1 2938 3114 -3032 1395 142 146 62 chr10 84048416 84048704 -61540584 + AluSx SINE Alu 1 312 0 5088 229 61 79 chr10 84048704 84048839 -61540449 + L1M4 LINE L1 3114 3250 -2896 1606 138 16 0 chr10 84048839 84049093 -61540195 + AluSx SINE Alu 49 306 -6 5088 229 61 79 chr10 84049093 84050000 -61539288 + L1M4 LINE L1 3250 4172 -1974 2111 107 3 0 chr10 84050000 84050291 -61538997 + AluSg SINE Alu 11 302 -8 5088 229 61 79 chr10 84050291 84050362 -61538926 + L1M4 LINE L1 4172 4243 -1903 2343 74 0 13 chr10 84050362 84050673 -61538615 + AluY SINE Alu 1 307 -4 5088 229 61 79 chr10 84050673 84051652 -61537636 + L1M4 LINE L1 4243 5165 -981 8866 174 25 31 chr10 84051653 84053254 -61536034 + L1M2 LINE L1 3259 4869 -1428 3165 77 59 5 chr10 84053254 84053697 -61535591 - L1PA10 LINE L1 0 6168 5702 8866 174 25 31 chr10 84053697 84053826 -61535462 + L1M2 LINE L1 4869 4997 -1300 2140 98 11 0 chr10 84053826 84054113 -61535175 - AluSg SINE Alu -20 290 1 8866 174 25 31 chr10 84054113 84054718 -61534570 + L1M2 LINE L1 4997 5491 -806 225 0 0 0 chr10 84054718 84054743 -61534545 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 8866 174 25 31 chr10 84054743 84054894 -61534394 + L1M2 LINE L1 5491 5642 -655 1623 127 45 52 chr10 84054891 84055182 -61534106 + L1M3f LINE L1 1648 1936 -4629 * 767 163 27 0 chr10 84055186 84055333 -61533955 + L1M3f LINE L1 1973 2123 -4442 338 200 80 0 chr10 84055341 84055416 -61533872 + L1M3f LINE L1 3531 3611 -3954 2379 175 20 5 chr10 84055416 84055810 -61533478 + MSTB LTR MaLR 1 400 -26 1076 143 99 0 chr10 84055815 84055997 -61533291 + MER30 DNA MER1_type 1 200 -30 5297 180 26 34 chr10 84056004 84056451 -61532837 + L1M3f LINE L1 3590 4039 -3526 2205 102 3 10 chr10 84056451 84056764 -61532524 + AluSx SINE Alu 1 311 -1 5297 180 26 34 chr10 84056764 84056802 -61532486 + L1M3f LINE L1 4039 4076 -3489 1495 105 0 0 chr10 84056802 84057039 -61532249 + AluSq SINE Alu 86 322 0 5297 180 26 34 chr10 84057039 84057784 -61531504 + L1M3f LINE L1 4076 4810 -2755 1619 253 83 6 chr10 84057773 84058280 -61531008 - L1MC4a LINE L1 -122 7686 7141 * 544 121 30 20 chr10 84058448 84058547 -61530741 + L1MA5A LINE L1 6183 6282 -15 2177 100 3 0 chr10 84058674 84058965 -61530323 - AluSq SINE Alu -20 293 2 1248 92 22 11 chr10 84058979 84059164 -61530124 - L1PA6 LINE L1 0 6154 5968 881 130 0 0 chr10 84059164 84059302 -61529986 + MER75 DNA T2_type 263 400 -114 1222 110 0 0 chr10 84059305 84059478 -61529810 - AluSg/x SINE Alu -3 309 137 278 0 51 0 chr10 84059590 84059629 -61529659 - AluY SINE Alu -224 76 36 460 215 44 37 chr10 84059665 84059800 -61529488 - L1M4 LINE L1 -855 5291 5156 1956 116 10 10 chr10 84059800 84060093 -61529195 - AluSx SINE Alu -19 293 1 1058 139 6 0 chr10 84060201 84060366 -61528922 + AluSq SINE Alu 128 293 -20 1248 108 42 9 chr10 84060493 84060705 -61528583 - L1MA5A LINE L1 -15 6282 6064 398 111 42 0 chr10 84060732 84060804 -61528484 - L1MB3 LINE L1 -2 6181 6107 263 136 17 17 chr10 84060821 84060880 -61528408 - L1MA4 LINE L1 -284 6016 5958 1389 164 0 48 chr10 84060904 84061018 -61528270 - L1MA4 LINE L1 -908 5238 5120 2156 115 0 0 chr10 84061018 84061322 -61527966 + AluSx SINE Alu 1 304 -8 2139 100 3 0 chr10 84061324 84061613 -61527675 + AluSq SINE Alu 3 292 -21 1389 164 0 48 chr10 84061613 84061805 -61527483 - L1MA4 LINE L1 -1027 5119 4944 350 257 95 9 chr10 84061811 84061916 -61527372 - MER5A DNA MER1_type -69 120 7 187 159 63 79 chr10 84062062 84062125 -61527163 + MIR3 SINE MIR 5 66 -142 990 183 70 39 chr10 84063343 84063467 -61525821 + AluJb SINE Alu 1 120 -192 180 0 0 0 chr10 84063467 84063487 -61525801 + (TAA)n Simple_repeat Simple_repeat 2 21 0 990 183 70 39 chr10 84063487 84063619 -61525669 + AluJb SINE Alu 120 265 -47 348 217 108 64 chr10 84064285 84064442 -61524846 - MER69A DNA AcHobo -4 173 10 263 303 76 21 chr10 84064984 84065129 -61524159 - L2 LINE L2 -834 2480 2328 626 269 74 30 chr10 84067032 84067329 -61521959 + L1MEd LINE L1 12 321 -5798 768 161 17 100 chr10 84067375 84067555 -61521733 + AluJo SINE Alu 32 196 -116 483 269 117 15 chr10 84067573 84067770 -61521518 + L1MEd LINE L1 490 706 -5413 220 354 15 62 chr10 84068016 84068146 -61521142 - MIR3 SINE MIR -81 127 4 303 306 41 0 chr10 84068670 84068768 -61520520 + L2 LINE L2 3209 3310 -3 198 0 0 0 chr10 84069763 84069785 -61519503 + (A)n Simple_repeat Simple_repeat 1 22 0 192 265 44 29 chr10 84070246 84070314 -61518974 - MIR3 SINE MIR -54 154 86 203 288 30 0 chr10 84071115 84071181 -61518107 - L3 LINE CR1 -194 1383 1316 3976 178 48 53 chr10 84071196 84072155 -61517133 - LTR13 LTR ERVK 0 954 1 1892 149 142 39 chr10 84073559 84073974 -61515314 + LTR46 LTR ERV1 1 458 -2 338 279 154 43 chr10 84074293 84074526 -61514762 + L1MC4a LINE L1 5709 5967 -1841 1373 225 86 68 chr10 84074881 84075330 -61513958 - LOR1a LTR ERV1 0 497 58 775 77 19 0 chr10 84075330 84075434 -61513854 - U6 snRNA snRNA -1 106 1 2034 126 0 3 chr10 84075434 84075728 -61513560 - AluSx SINE Alu -19 293 1 1373 225 86 68 chr10 84075728 84075765 -61513523 - LOR1a LTR ERV1 -438 59 1 289 249 102 58 chr10 84075776 84076005 -61513283 - L1MC4 LINE L1 -399 7643 7292 2027 172 23 23 chr10 84076084 84076529 -61512759 + MER89 LTR ERV1 10 553 -6 194 300 0 0 chr10 84076959 84076999 -61512289 + L2 LINE L2 3212 3251 -21 325 251 80 74 chr10 84077759 84077934 -61511354 + L1MC4a LINE L1 5868 6043 -1765 210 105 0 0 chr10 84077934 84077972 -61511316 + (TA)n Simple_repeat Simple_repeat 2 39 0 204 40 0 0 chr10 84082853 84082878 -61506410 + (TG)n Simple_repeat Simple_repeat 2 26 0 501 252 117 96 chr10 84082881 84082974 -61506314 + MLT2C2 LTR ERVL 20 110 -354 2154 76 24 3 chr10 84082974 84083263 -61506025 + AluY SINE Alu 1 295 -16 501 252 117 96 chr10 84083263 84083605 -61505683 + MLT2C2 LTR ERVL 110 464 0 591 264 24 61 chr10 84083718 84083964 -61505324 + HAL1 LINE L1 8 244 -2263 1465 235 136 65 chr10 84084082 84084554 -61504734 + HAL1 LINE L1 411 848 -1659 390 21 0 0 chr10 84084554 84084601 -61504687 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 1465 235 136 65 chr10 84084601 84084841 -61504447 + HAL1 LINE L1 848 1187 -1320 1962 149 10 0 chr10 84084841 84085150 -61504138 + AluJo SINE Alu 1 312 0 1465 235 136 65 chr10 84085150 84085231 -61504057 + HAL1 LINE L1 1187 1261 -1246 2309 82 3 0 chr10 84085359 84085665 -61503623 - AluY SINE Alu -4 307 1 314 291 36 45 chr10 84085858 84085968 -61503320 + HAL1 LINE L1 1792 1900 -607 817 143 0 0 chr10 84086660 84086779 -61502509 + FLAM_C SINE Alu 1 119 -24 223 283 11 87 chr10 84087426 84087518 -61501770 - MIR3 SINE MIR -2 206 122 339 175 62 12 chr10 84087782 84087862 -61501426 - L1ME4a LINE L1 -6 6115 6032 2193 89 3 0 chr10 84087999 84088291 -61500997 + AluSp SINE Alu 1 293 -20 700 289 69 4 chr10 84091389 84091649 -61497639 + MER5C DNA MER1_type 1 277 -47 264 188 0 0 chr10 84091652 84091716 -61497572 + (CA)n Simple_repeat Simple_repeat 1 64 0 207 88 0 0 chr10 84091925 84091959 -61497329 + (T)n Simple_repeat Simple_repeat 1 34 0 304 226 0 0 chr10 84095077 84095130 -61494158 - MER81 DNA DNA -18 96 44 577 268 36 27 chr10 84095435 84095655 -61493633 + MLT1J LTR MaLR 290 511 0 2014 144 0 0 chr10 84096296 84096602 -61492686 + AluSx SINE Alu 2 307 -5 380 252 45 26 chr10 84097188 84097343 -61491945 + L1ME3A LINE L1 5773 5930 -191 1397 214 48 61 chr10 84097656 84097995 -61491293 + MLT1A2 LTR MaLR 1 336 -38 1795 163 3 7 chr10 84097995 84098301 -61490987 - AluJo SINE Alu -7 305 1 1397 214 48 61 chr10 84098301 84098340 -61490948 + MLT1A2 LTR MaLR 336 374 0 182 235 39 20 chr10 84098533 84098584 -61490704 + MER5B DNA MER1_type 1 52 -126 263 314 25 16 chr10 84098634 84098755 -61490533 + L1ME LINE L1 51 172 -5898 324 290 73 67 chr10 84099618 84100167 -61489121 + L1ME LINE L1 800 1362 -4718 1361 258 62 21 chr10 84100167 84100652 -61488636 + MLT1D LTR MaLR 1 505 0 324 290 73 67 chr10 84100652 84100927 -61488361 + L1ME LINE L1 1362 1634 -4446 2032 118 0 43 chr10 84100993 84101316 -61487972 + AluSx SINE Alu 1 309 -3 455 331 46 79 chr10 84101320 84101625 -61487663 + L1ME LINE L1 1798 2092 -4169 329 211 10 77 chr10 84101676 84101780 -61487508 + L1ME3A LINE L1 6074 6170 0 * 917 236 60 12 chr10 84101776 84102107 -61487181 + L1ME LINE L1 2111 2457 -3623 2005 126 0 7 chr10 84102276 84102578 -61486710 - AluJb SINE Alu -12 300 1 601 224 55 91 chr10 84102578 84102788 -61486500 - MER58C DNA MER1_type -2216 204 1 410 287 79 82 chr10 84103254 84103354 -61485934 + MLT1J LTR MaLR 5 104 -407 2222 106 3 0 chr10 84103354 84103656 -61485632 - AluSx SINE Alu -9 303 1 410 287 79 82 chr10 84103656 84103872 -61485416 + MLT1J LTR MaLR 104 320 -191 948 251 96 37 chr10 84104560 84104914 -61484374 + L1MB7 LINE L1 5809 6183 -1 1572 178 27 17 chr10 84106653 84106951 -61482337 - AluJb SINE Alu -11 301 1 2253 90 0 13 chr10 84107199 84107500 -61481788 + AluSq SINE Alu 1 297 -16 2005 135 3 0 chr10 84107510 84107807 -61481481 + AluSx SINE Alu 1 298 -14 211 358 23 23 chr10 84108211 84108387 -61480901 - MIR3 SINE MIR -11 197 22 277 252 29 19 chr10 84109225 84109328 -61479960 + GA-rich Low_complexity Low_complexity 4 107 0 235 327 9 9 chr10 84112309 84112357 -61476931 + HAL1b LINE L1 1226 1273 -75 2100 134 3 0 chr10 84112357 84112663 -61476625 - AluSx SINE Alu -5 307 1 235 327 9 9 chr10 84112663 84112721 -61476567 + HAL1b LINE L1 1272 1332 -16 405 0 0 0 chr10 84112847 84112892 -61476396 + (TA)n Simple_repeat Simple_repeat 2 46 0 2085 107 43 0 chr10 84112948 84113247 -61476041 - AluSx SINE Alu 0 312 1 2180 102 0 3 chr10 84113763 84114056 -61475232 + AluSq SINE Alu 1 292 -21 437 302 38 13 chr10 84114489 84114648 -61474640 + MIR SINE MIR 56 218 -44 317 301 48 14 chr10 84116755 84116901 -61472387 + L2 LINE L2 2694 2844 -470 762 302 57 19 chr10 84116950 84117318 -61471970 + L2 LINE L2 2932 3313 0 419 286 42 0 chr10 84117357 84117476 -61471812 + MIR SINE MIR 121 244 -18 2232 115 0 0 chr10 84118448 84118752 -61470536 + AluSx SINE Alu 1 304 -8 1969 134 3 0 chr10 84120749 84121041 -61468247 + AluSg SINE Alu 1 293 -17 27 73 0 0 chr10 84121060 84121115 -61468173 + AT_rich Low_complexity Low_complexity 1 55 0 1929 187 102 43 chr10 84121119 84121648 -61467640 + L1MC2 LINE L1 5777 6336 -8 2192 84 24 3 chr10 84121912 84122208 -61467080 - AluSp SINE Alu -11 302 1 641 167 0 0 chr10 84122208 84122304 -61466984 - AluJ SINE Alu -14 298 203 638 152 179 0 chr10 84122303 84122415 -61466873 - AluJ SINE Alu -179 133 2 * 253 324 6 35 chr10 84122416 84122589 -61466699 - L1MC4 LINE L1 -180 7862 7695 1366 248 48 80 chr10 84123399 84123748 -61465540 + L1MD1 LINE L1 5753 6112 -130 564 29 0 0 chr10 84123748 84123818 -61465470 + (CA)n Simple_repeat Simple_repeat 1 70 0 1366 248 48 80 chr10 84123818 84123958 -61465330 + L1MD1 LINE L1 6112 6228 -14 2078 117 3 7 chr10 84123958 84124258 -61465030 - AluSx SINE Alu -13 299 1 382 349 52 6 chr10 84124396 84124568 -61464720 + L1MC/D LINE L1 5474 5653 -2155 1921 139 17 7 chr10 84124748 84125050 -61464238 + AluSx SINE Alu 1 305 -7 2048 142 3 0 chr10 84125066 84125377 -61463911 + AluSx SINE Alu 1 312 0 2100 103 3 3 chr10 84125622 84125924 -61463364 - AluSx SINE Alu -10 302 1 416 270 48 41 chr10 84125924 84126159 -61463129 + L1MC/D LINE L1 5579 5803 -365 22 70 0 0 chr10 84126451 84126494 -61462794 + AT_rich Low_complexity Low_complexity 1 43 0 2108 117 3 3 chr10 84126603 84126910 -61462378 + AluSx SINE Alu 1 307 -5 410 119 0 0 chr10 84126974 84127033 -61462255 + AluSg/x SINE Alu 215 273 -39 843 266 100 4 chr10 84128062 84128291 -61460997 + MIR SINE MIR 9 259 -3 991 265 94 30 chr10 84129462 84129513 -61459775 + L1M4 LINE L1 4557 4603 -1543 1943 123 23 19 chr10 84129513 84129822 -61459466 + AluSx SINE Alu 1 310 -2 991 265 94 30 chr10 84129822 84130204 -61459084 + L1M4 LINE L1 4603 5018 -1128 1778 144 58 0 chr10 84130316 84130593 -61458695 + AluSx SINE Alu 1 293 -19 361 291 30 30 chr10 84131814 84131948 -61457340 + L2 LINE L2 3180 3313 0 242 326 51 7 chr10 84133512 84133650 -61455638 + L2 LINE L2 2919 3062 -210 187 189 27 0 chr10 84133760 84133797 -61455491 + L2 LINE L2 3267 3304 -9 2101 128 0 0 chr10 84135315 84135621 -61453667 + AluSx SINE Alu 1 306 -6 2132 123 3 0 chr10 84137597 84137906 -61451382 + AluSq SINE Alu 1 310 -3 1854 150 13 3 chr10 84138474 84138781 -61450507 + AluJo SINE Alu 1 310 -2 1981 122 10 3 chr10 84138822 84139117 -61450171 + AluSx SINE Alu 9 305 -7 196 327 18 26 chr10 84140003 84140116 -61449172 + L2 LINE L2 3151 3262 -10 255 260 0 67 chr10 84140867 84140971 -61448317 - MIR3 SINE MIR -1 207 111 482 237 52 22 chr10 84141157 84141292 -61447996 - MER103 DNA DNA -19 147 9 378 250 21 21 chr10 84141532 84141628 -61447660 + MER68 LTR ERV1 1 96 -466 2228 210 30 49 chr10 84142309 84142838 -61446450 + MER68 LTR ERV1 1 519 -43 345 291 114 46 chr10 84142941 84143558 -61445730 - L2 LINE L2 -27 3286 2622 311 325 0 0 chr10 84143578 84143705 -61445583 + MIR3 SINE MIR 62 189 -19 418 200 0 18 chr10 84143958 84144068 -61445220 + GA-rich Low_complexity Low_complexity 3 110 0 207 0 0 0 chr10 84144313 84144336 -61444952 + (A)n Simple_repeat Simple_repeat 1 23 0 2339 107 0 0 chr10 84144341 84144641 -61444647 + AluSq SINE Alu 1 300 -13 2241 113 0 0 chr10 84144795 84145086 -61444202 + AluSg SINE Alu 1 291 -19 304 267 105 0 chr10 84145714 84145819 -61443469 - L3 LINE CR1 -213 1364 1249 224 233 0 0 chr10 84146019 84146062 -61443226 + (CA)n Simple_repeat Simple_repeat 1 43 0 1636 139 8 4 chr10 84146146 84146384 -61442904 - AluJb SINE Alu -73 239 1 654 157 87 0 chr10 84148262 84148377 -61440911 - FLAM_C SINE Alu -17 126 2 2670 166 92 32 chr10 84148431 84149053 -61440235 - L1MB7 LINE L1 -21 6163 5505 1103 214 33 95 chr10 84150431 84150469 -61438819 + L1MC4 LINE L1 6459 6498 -1544 2243 116 3 3 chr10 84150469 84150772 -61438516 + AluSc SINE Alu 1 303 -6 1103 214 33 95 chr10 84150772 84150791 -61438497 + L1MC4 LINE L1 6498 6517 -1525 2287 72 14 0 chr10 84150791 84151089 -61438199 - AluY SINE Alu 0 302 1 1103 214 33 95 chr10 84151089 84151367 -61437921 + L1MC4 LINE L1 6517 6768 -1274 1627 173 61 4 chr10 84151367 84151645 -61437643 - AluJo SINE Alu -18 294 1 1103 214 33 95 chr10 84151645 84151726 -61437562 + L1MC4 LINE L1 6768 6852 -1190 267 333 17 16 chr10 84152399 84152538 -61436750 - MIR SINE MIR -62 146 28 262 234 117 27 chr10 84152834 84152945 -61436343 + MER5A DNA MER1_type 1 121 -68 2026 130 3 10 chr10 84153083 84153375 -61435913 + AluJb SINE Alu 1 290 -22 216 0 0 0 chr10 84153379 84153403 -61435885 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 528 194 243 7 chr10 84153444 84153588 -61435700 + MER5B DNA MER1_type 1 178 0 732 204 10 66 chr10 84153596 84153792 -61435496 + MER5A DNA MER1_type 1 185 -4 1093 191 57 0 chr10 84153804 84154013 -61435275 - MER58A DNA MER1_type 0 224 4 1738 184 0 23 chr10 84154442 84154746 -61434542 + AluJb SINE Alu 1 297 -15 234 0 0 0 chr10 84154833 84154859 -61434429 + (CA)n Simple_repeat Simple_repeat 2 27 0 317 280 112 16 chr10 84155304 84155429 -61433859 - MIR SINE MIR -14 248 112 497 148 11 34 chr10 84156582 84156670 -61432618 + Tigger3(Golem) DNA MER2_type 1 86 -2943 2002 145 0 10 chr10 84156732 84157036 -61432252 + AluJb SINE Alu 1 301 -11 271 143 0 0 chr10 84157036 84157078 -61432210 + Tigger3(Golem) DNA MER2_type 67 108 -2921 4005 127 38 30 chr10 84157078 84157246 -61432042 + Tigger3(Golem) DNA MER2_type 2285 2450 -579 2005 146 7 10 chr10 84157246 84157555 -61431733 - AluJo SINE Alu -4 308 1 4005 127 38 30 chr10 84157555 84158125 -61431163 + Tigger3(Golem) DNA MER2_type 2450 3029 0 387 238 19 29 chr10 84158457 84158562 -61430726 - MIR SINE MIR -69 193 90 2394 90 3 13 chr10 84158669 84158980 -61430308 - AluSq SINE Alu -5 308 1 425 279 86 7 chr10 84158981 84159121 -61430167 - MIR SINE MIR -34 228 78 1304 249 103 23 chr10 84159183 84159657 -61429631 - Charlie1b DNA MER1_type -10 513 2 186 328 60 26 chr10 84159963 84160079 -61429209 - MIR SINE MIR 0 262 143 333 307 178 4 chr10 84160490 84160721 -61428567 - L3 LINE CR1 -14 1563 1293 2380 218 100 42 chr10 84160741 84161458 -61427830 + L1ME1 LINE L1 5412 6161 -5 1985 147 0 23 chr10 84161479 84161778 -61427510 - AluJo SINE Alu -20 292 1 180 308 188 33 chr10 84161796 84162036 -61427252 - L3 LINE CR1 -477 1100 824 661 187 39 32 chr10 84162908 84163063 -61426225 + MER5A DNA MER1_type 34 189 0 269 229 29 0 chr10 84163275 84163345 -61425943 + LTR16C LTR ERVL 415 486 -5 237 330 0 33 chr10 84163394 84163485 -61425803 + L2 LINE L2 2999 3086 -186 345 242 234 0 chr10 84164670 84164794 -61424494 - MER5A DNA MER1_type -36 153 1 631 210 36 7 chr10 84164898 84165036 -61424252 + MER3 DNA MER1_type 68 209 0 344 154 77 13 chr10 84166038 84166116 -61423172 + MLT1C LTR MaLR 3 85 -382 1863 202 21 5 chr10 84166210 84166586 -61422702 + MLT1C LTR MaLR 82 463 -4 196 323 79 31 chr10 84166659 84166786 -61422502 + L2 LINE L2 3138 3270 -2 284 318 8 79 chr10 84166787 84166913 -61422375 + MIR3 SINE MIR 68 184 -24 406 322 7 35 chr10 84168242 84168385 -61420903 + MIR3 SINE MIR 41 179 -29 189 379 123 28 chr10 84168404 84168615 -61420673 + L3 LINE CR1 629 859 -718 2146 139 0 7 chr10 84168780 84169083 -61420205 + AluJb SINE Alu 1 301 -11 286 277 177 38 chr10 84169457 84169796 -61419492 + L3 LINE CR1 1189 1574 -3 2348 101 0 7 chr10 84169916 84170224 -61419064 - AluSg SINE Alu -4 306 1 240 214 54 0 chr10 84171600 84171656 -61417632 - MER5A DNA MER1_type -84 105 47 805 286 41 12 chr10 84172564 84172746 -61416542 + MIR SINE MIR 11 203 -59 1630 143 84 32 chr10 84172746 84173089 -61416199 + MER46B DNA MER2_type 1 236 0 805 286 41 12 chr10 84173089 84173151 -61416137 + MIR SINE MIR 203 262 0 798 269 51 20 chr10 84173297 84173550 -61415738 - MIR SINE MIR 0 262 2 721 155 9 0 chr10 84174602 84174718 -61414570 + AluJo/FLAM SINE Alu 1 117 -185 2066 116 49 3 chr10 84174719 84175004 -61414284 - AluSx SINE Alu -14 298 1 560 110 0 11 chr10 84175025 84175116 -61414172 + (GGGA)n Simple_repeat Simple_repeat 3 92 0 905 110 0 77 chr10 84175239 84175394 -61413894 - FLAM_C SINE Alu 0 143 1 581 267 162 0 chr10 84176591 84176782 -61412506 + MIR SINE MIR 27 248 -14 1988 260 112 53 chr10 84177358 84178523 -61410765 - L2 LINE L2 -56 3257 2048 2323 108 0 0 chr10 84178554 84178869 -61410419 + AluSx SINE Alu 1 315 0 719 243 106 0 chr10 84179131 84179320 -61409968 - MIR SINE MIR -10 252 44 1837 113 0 0 chr10 84179345 84179583 -61409705 - AluSg/x SINE Alu -6 304 67 297 292 68 62 chr10 84180586 84180778 -61408510 + MIR SINE MIR 20 212 -50 1887 112 33 49 chr10 84181008 84181313 -61407975 + AluSx SINE Alu 1 300 -12 2242 121 0 6 chr10 84182065 84182379 -61406909 - AluSx SINE Alu 0 312 1 202 266 160 21 chr10 84184164 84184258 -61405030 - MIR3 SINE MIR -49 159 53 220 254 17 17 chr10 84184439 84184498 -61404790 + MER5B DNA MER1_type 1 59 -119 1936 100 100 4 chr10 84184765 84185036 -61404252 - AluSx SINE Alu -15 297 1 2206 153 10 18 chr10 84185049 84185440 -61403848 + MLT1B LTR MaLR 3 390 0 321 326 23 0 chr10 84185494 84185623 -61403665 - MIR SINE MIR -59 203 72 246 264 109 18 chr10 84188214 84188324 -61400964 + MER20B DNA MER1_type 31 150 -633 251 216 102 57 chr10 84188789 84188877 -61400411 + MIR SINE MIR 47 138 -124 1322 86 6 0 chr10 84188914 84189076 -61400212 + AluSp SINE Alu 1 163 -150 197 291 81 0 chr10 84189442 84189528 -61399760 + L2 LINE L2 3006 3098 -215 550 191 136 27 chr10 84189591 84189738 -61399550 + MER45A DNA AcHobo 1 163 -15 309 26 0 0 chr10 84189949 84189987 -61399301 + (CA)n Simple_repeat Simple_repeat 2 39 0 219 275 261 0 chr10 84190193 84190262 -61399026 + MIR SINE MIR 22 108 -154 361 226 12 0 chr10 84190851 84190935 -61398353 - MIR3 SINE MIR -7 201 117 257 372 62 0 chr10 84190986 84191131 -61398157 + L2 LINE L2 3111 3264 -8 196 236 45 67 chr10 84191743 84191832 -61397456 - MIR SINE MIR -68 194 108 717 224 0 57 chr10 84192552 84192762 -61396526 + MIR SINE MIR 2 199 -63 198 0 0 0 chr10 84192915 84192937 -61396351 + (T)n Simple_repeat Simple_repeat 1 22 0 205 139 0 0 chr10 84193132 84193168 -61396120 + L2 LINE L2 3017 3052 -220 1056 50 0 0 chr10 84194101 84194220 -61395068 + AluSq/x SINE Alu 1 119 -194 1032 123 91 0 chr10 84194377 84194531 -61394757 + AluSc SINE Alu 125 292 -17 673 265 65 65 chr10 84194629 84194935 -61394353 + L1MC4 LINE L1 7630 7938 -104 1854 106 91 11 chr10 84194935 84195209 -61394079 + AluSq SINE Alu 3 298 -15 673 265 65 65 chr10 84195209 84195314 -61393974 + L1MC4 LINE L1 7937 8041 -1 2216 112 0 0 chr10 84195448 84195763 -61393525 + AluSx SINE Alu 1 315 0 815 178 0 0 chr10 84195928 84196057 -61393231 + FLAM_C SINE Alu 13 141 -2 264 289 36 0 chr10 84196058 84196141 -61393147 + GA-rich Low_complexity Low_complexity 1 86 0 590 231 95 0 chr10 84197755 84197902 -61391386 + MIR SINE MIR 31 191 -71 512 253 111 30 chr10 84198395 84198593 -61390695 - MIR SINE MIR -10 252 39 303 325 57 28 chr10 84198631 84198843 -61390445 + L2 LINE L2 2827 3044 -228 2421 85 0 49 chr10 84198892 84199031 -61390257 + AluSx SINE Alu 1 145 -167 2297 117 0 0 chr10 84199031 84199331 -61389957 + AluSg SINE Alu 3 302 -8 2421 85 0 49 chr10 84199331 84199519 -61389769 + AluSx SINE Alu 145 312 0 189 301 21 54 chr10 84200560 84200653 -61388635 + MER5A DNA MER1_type 74 163 -26 * 313 307 35 18 chr10 84200572 84200686 -61388602 - MER5A DNA MER1_type -69 120 5 451 254 47 26 chr10 84200720 84200913 -61388375 + L1ME LINE L1 5580 5776 -345 2491 56 0 0 chr10 84200958 84201285 -61388003 + AluY SINE Alu 1 327 0 302 94 5 20 chr10 84201285 84201353 -61387935 + Alu SINE Alu 254 298 -2 631 146 75 2 chr10 84201364 84201525 -61387763 + Tigger4(Zombi) DNA MER2_type 5 2565 -166 2509 90 0 0 chr10 84201525 84201836 -61387452 + AluSx SINE Alu 1 311 -1 1322 93 16 47 chr10 84201837 84202030 -61387258 + AluSg/x SINE Alu 120 306 -6 1149 123 0 6 chr10 84202030 84202209 -61387079 + Tigger4(Zombi) DNA MER2_type 2554 2731 0 943 173 16 70 chr10 84202403 84202588 -61386700 + FAM SINE Alu 1 175 0 541 129 32 0 chr10 84202593 84202686 -61386602 + THE1A LTR MaLR 186 281 -74 1191 38 6 0 chr10 84202686 84202843 -61386445 + THE1A-int LTR MaLR 1423 1580 0 1962 109 23 3 chr10 84202843 84203145 -61386143 + THE1A LTR MaLR 1 308 -47 2530 77 0 0 chr10 84203226 84203526 -61385762 + AluSq SINE Alu 1 300 -13 829 153 0 0 chr10 84203556 84203680 -61385608 - FLAM_C SINE Alu -9 124 1 2189 136 0 3 chr10 84204997 84205305 -61383983 - AluSx SINE Alu -5 307 1 478 281 18 0 chr10 84205440 84205554 -61383734 - MER5C DNA MER1_type -201 123 8 1859 166 3 0 chr10 84205677 84205961 -61383327 + AluJb SINE Alu 1 285 -27 924 235 111 0 chr10 84205974 84206208 -61383080 - MIR SINE MIR -1 261 2 236 284 112 47 chr10 84206208 84206312 -61382976 + MIR SINE MIR 92 206 -56 1992 70 19 0 chr10 84207636 84207894 -61381394 + L1PA7 LINE L1 5892 6154 0 200 270 95 0 chr10 84208669 84208743 -61380545 + MIR SINE MIR 69 149 -113 379 247 0 0 chr10 84208975 84209048 -61380240 + MIR3 SINE MIR 126 198 -10 2074 128 3 41 chr10 84209070 84209390 -61379898 + AluSx SINE Alu 1 308 -4 189 0 0 0 chr10 84209509 84209530 -61379758 + (ATTG)n Simple_repeat Simple_repeat 4 24 0 1510 174 57 0 chr10 84209530 84209795 -61379493 - AluJo SINE Alu -32 280 1 1606 151 36 62 chr10 84210297 84210602 -61378686 + AluJo SINE Alu 1 297 -15 1828 122 84 21 chr10 84210634 84210920 -61378368 - 7SLRNA srpRNA srpRNA -13 307 4 22 0 0 0 chr10 84211454 84211476 -61377812 + AT_rich Low_complexity Low_complexity 1 22 0 188 318 59 24 chr10 84211557 84211642 -61377646 - L3 LINE CR1 -119 1458 1371 278 294 33 26 chr10 84211681 84211834 -61377454 + L1MC5 LINE L1 7506 7659 -302 321 224 0 0 chr10 84211837 84211904 -61377384 + L1MC5 LINE L1 7704 7770 -191 1796 181 3 3 chr10 84211961 84212265 -61377023 - AluJo SINE Alu -8 304 1 339 292 60 48 chr10 84212312 84212596 -61376692 - L3 LINE CR1 -193 1384 1043 432 252 95 34 chr10 84212782 84212929 -61376359 - MIR SINE MIR -67 195 40 2247 122 0 0 chr10 84213426 84213721 -61375567 + AluSg SINE Alu 1 295 -15 1643 134 4 13 chr10 84214371 84214609 -61374679 + AluJo SINE Alu 58 293 -19 1294 123 5 5 chr10 84214673 84214860 -61374428 - AluSp SINE Alu -16 297 111 298 247 37 0 chr10 84215222 84215303 -61373985 - L1ME LINE L1 -523 5647 5564 2061 134 3 3 chr10 84215449 84215748 -61373540 + AluY SINE Alu 1 299 -12 768 193 0 0 chr10 84215785 84215920 -61373368 + FRAM SINE Alu 40 174 -2 2144 140 7 0 chr10 84215998 84216305 -61372983 + AluSx SINE Alu 1 309 -3 21 0 0 0 chr10 84216308 84216329 -61372959 + AT_rich Low_complexity Low_complexity 1 21 0 1538 241 96 13 chr10 84216329 84216777 -61372511 - MLT1J LTR MaLR -24 487 3 1989 122 14 0 chr10 84216907 84217213 -61372075 - AluSq SINE Alu 0 313 4 2010 112 61 0 chr10 84217333 84217611 -61371677 - AluSx SINE Alu -17 295 1 909 213 0 0 chr10 84217633 84217793 -61371495 - FRAM SINE Alu -16 160 1 1837 151 27 20 chr10 84217803 84218102 -61371186 - AluJb SINE Alu -11 301 1 551 194 0 90 chr10 84218102 84218197 -61371091 - L1M3 LINE L1 -576 5607 5528 2666 49 0 3 chr10 84218197 84218503 -61370785 + AluY SINE Alu 1 305 -6 551 194 0 90 chr10 84218503 84218551 -61370737 - L1M3 LINE L1 -655 5528 5477 1762 173 3 17 chr10 84218571 84218871 -61370417 - AluJo SINE Alu -16 296 1 2076 130 3 13 chr10 84218911 84219219 -61370069 - AluJb SINE Alu -7 305 1 560 229 91 48 chr10 84220430 84220543 -61368745 - HAL1 LINE L1 0 2507 2400 2361 101 0 10 chr10 84220543 84220851 -61368437 - AluSx SINE Alu -7 305 1 560 229 91 48 chr10 84220851 84220968 -61368320 - HAL1 LINE L1 -107 2400 2267 1220 219 161 48 chr10 84220972 84221270 -61368018 - HAL1 LINE L1 -282 2225 1962 2220 122 0 3 chr10 84221270 84221574 -61367714 + AluSq SINE Alu 1 303 -10 1220 219 161 48 chr10 84221574 84221840 -61367448 - HAL1 LINE L1 -545 1962 1597 1295 52 0 0 chr10 84221840 84221993 -61367295 + AluY SINE Alu 157 309 -2 988 208 85 41 chr10 84221993 84222028 -61367260 - HAL1 LINE L1 -899 1608 1576 1957 144 45 3 chr10 84222028 84222320 -61366968 + AluSx SINE Alu 1 304 -8 988 208 85 41 chr10 84222320 84222577 -61366711 - HAL1 LINE L1 -931 1576 1303 546 40 13 53 chr10 84222577 84222676 -61366612 - AluSg/x SINE Alu 0 309 215 919 94 8 0 chr10 84222783 84222938 -61366350 + AluSp/q SINE Alu 184 339 0 205 284 30 15 chr10 84223029 84223096 -61366192 - L2 LINE L2 -212 3060 2993 495 200 33 0 chr10 84223246 84223336 -61365952 - FLAM_A SINE Alu -22 120 28 883 109 23 8 chr10 84223541 84223669 -61365619 - FLAM_C SINE Alu -13 130 1 298 287 53 11 chr10 84223786 84223880 -61365408 - L2 LINE L2 -4 3309 3212 441 216 72 43 chr10 84224054 84224193 -61365095 - MIR SINE MIR -103 159 17 584 304 48 14 chr10 84224202 84224409 -61364879 - MIR SINE MIR -14 248 35 1654 174 21 7 chr10 84224640 84224928 -61364360 + AluJo SINE Alu 5 296 -16 1848 137 40 20 chr10 84224931 84225066 -61364222 + AluSx SINE Alu 1 132 -180 2579 75 3 0 chr10 84225066 84225371 -61363917 + AluSp SINE Alu 1 306 -7 1848 137 40 20 chr10 84225371 84225535 -61363753 + AluSx SINE Alu 132 306 -6 2462 80 0 13 chr10 84225537 84225851 -61363437 + AluSx SINE Alu 1 310 -2 2281 98 3 7 chr10 84226571 84226868 -61362420 - AluSq SINE Alu -17 296 1 1935 144 53 16 chr10 84226967 84227181 -61362107 + L1MB3 LINE L1 5573 5808 -375 198 0 0 0 chr10 84227181 84227203 -61362085 + (TA)n Simple_repeat Simple_repeat 2 23 0 1935 144 53 16 chr10 84227203 84227363 -61361925 + L1MB3 LINE L1 5808 5961 -222 1719 134 0 25 chr10 84227367 84227643 -61361645 + AluSx SINE Alu 39 307 -5 991 160 11 51 chr10 84227645 84227864 -61361424 + AluJb SINE Alu 136 347 0 808 159 56 78 chr10 84227867 84228021 -61361267 + L1MB3 LINE L1 5955 6104 -79 2428 74 30 0 chr10 84228021 84228320 -61360968 + AluSq SINE Alu 1 308 -5 808 159 56 78 chr10 84228320 84228397 -61360891 + L1MB3 LINE L1 6104 6181 -2 2212 108 3 7 chr10 84228405 84228700 -61360588 + AluSx SINE Alu 1 294 -18 243 89 0 22 chr10 84228700 84228745 -61360543 + L1MB3 LINE L1 6133 6176 -7 2233 128 0 0 chr10 84229210 84229515 -61359773 + AluSx SINE Alu 1 305 -7 180 159 114 0 chr10 84229622 84229666 -61359622 - MIR3 SINE MIR -18 190 142 261 0 0 0 chr10 84229861 84229890 -61359398 + (T)n Simple_repeat Simple_repeat 1 29 0 337 263 12 12 chr10 84230252 84230332 -61358956 - L2 LINE L2 0 3313 3234 209 311 87 0 chr10 84230517 84230620 -61358668 - MIR SINE MIR -78 184 73 925 122 0 0 chr10 84231336 84231459 -61357829 + FRAM SINE Alu 1 117 -59 220 258 65 11 chr10 84232193 84232286 -61357002 - L2 LINE L2 -1052 2262 2165 232 211 0 19 chr10 84232489 84232541 -61356747 - MIR SINE MIR -98 164 114 279 79 0 0 chr10 84233869 84233907 -61355381 + (TCCC)n Simple_repeat Simple_repeat 1 38 0 1834 187 10 3 chr10 84233907 84234217 -61355071 - AluJb SINE Alu 0 312 1 422 213 65 9 chr10 84234220 84234328 -61354960 + MIR SINE MIR 92 205 -57 703 182 7 52 chr10 84235203 84235357 -61353931 - L2 LINE L2 0 3313 3167 2150 116 0 0 chr10 84235365 84235641 -61353647 + AluSq SINE Alu 1 276 -37 234 346 60 23 chr10 84235995 84236128 -61353160 - MIR3 SINE MIR -54 154 17 2043 141 0 46 chr10 84236520 84236847 -61352441 - AluSx SINE Alu 0 312 1 922 130 120 0 chr10 84237108 84237300 -61351988 + MER33 DNA MER1_type 20 234 -90 1408 171 0 5 chr10 84237312 84237523 -61351765 - AluJo SINE Alu -102 210 1 2204 131 0 7 chr10 84237548 84237853 -61351435 + AluSx SINE Alu 1 303 -9 280 328 33 41 chr10 84237923 84238045 -61351243 + L2 LINE L2 3149 3269 -3 1361 221 132 24 chr10 84238313 84238769 -61350519 + MLT1J LTR MaLR 4 508 -3 1110 144 82 15 chr10 84238898 84239093 -61350195 - AluJb SINE Alu -19 293 86 1410 110 0 0 chr10 84239276 84239467 -61349821 - AluSc SINE Alu -118 191 1 1113 152 47 0 chr10 84239494 84239665 -61349623 + AluSg/x SINE Alu 123 301 -11 1360 126 73 0 chr10 84239668 84239874 -61349414 + AluJb SINE Alu 86 306 -6 467 183 0 0 chr10 84239930 84240001 -61349287 + AluSp/q SINE Alu 223 293 -20 3014 170 10 22 chr10 84240009 84240596 -61348692 + L1MB8 LINE L1 5433 6012 -166 3204 95 13 7 chr10 84240610 84241074 -61348214 - Charlie3 DNA MER1_type -4 2706 2240 * 3206 124 4 22 chr10 84241066 84241565 -61347723 - Charlie3 DNA MER1_type -2220 490 1 829 154 0 6 chr10 84241568 84241724 -61347564 + L1MB8 LINE L1 6024 6178 0 2034 105 43 23 chr10 84241881 84242185 -61347103 + AluSg SINE Alu 1 310 0 910 233 0 0 chr10 84242206 84242378 -61346910 + FRAM SINE Alu 1 170 -6 2001 191 126 30 chr10 84242582 84243090 -61346198 + MER74A LTR ERVL 1 557 -1 1542 157 15 80 chr10 84243129 84243280 -61346008 + AluJb SINE Alu 1 121 -191 2225 126 7 7 chr10 84243280 84243582 -61345706 + AluSx SINE Alu 1 302 -10 1542 157 15 80 chr10 84243582 84243755 -61345533 + AluJb SINE Alu 121 304 -8 185 329 27 14 chr10 84243771 84243825 -61345463 + MIR SINE MIR 111 165 -97 516 316 107 0 chr10 84243825 84244002 -61345286 + MER91A DNA MER1_type 1 196 0 2735 137 62 19 chr10 84244246 84244727 -61344561 + L1MB3 LINE L1 5675 6176 -7 1857 140 7 0 chr10 84244824 84245117 -61344171 + AluSx SINE Alu 1 295 -17 1823 156 3 3 chr10 84245338 84245645 -61343643 - AluJb SINE Alu -5 307 1 424 237 7 89 chr10 84245848 84245983 -61343305 - LTR67 LTR ERVL 0 557 434 486 336 61 5 chr10 84246361 84246575 -61342713 - MIR SINE MIR -8 254 29 2221 94 3 0 chr10 84246582 84246881 -61342407 + AluSg SINE Alu 1 300 -10 1729 147 46 7 chr10 84247168 84247453 -61341835 + AluSx SINE Alu 1 296 -16 236 288 12 0 chr10 84247550 84247630 -61341658 + L1MEc LINE L1 99 179 -6217 581 255 7 9 chr10 84247816 84247966 -61341322 + L1ME1 LINE L1 6013 6168 -16 1889 150 3 0 chr10 84247966 84248266 -61341022 - AluJb SINE Alu -11 301 1 581 255 7 9 chr10 84248266 84248278 -61341010 + L1ME1 LINE L1 6168 6179 -5 1469 214 0 3 chr10 84248471 84248770 -61340518 - AluJb SINE Alu -14 298 1 1583 200 3 7 chr10 84248781 84249076 -61340212 - AluSx SINE Alu -18 294 1 2139 235 132 65 chr10 84249334 84249640 -61339648 + HAL1 LINE L1 122 406 -2101 1851 145 0 0 chr10 84249640 84249942 -61339346 + AluSx SINE Alu 1 302 0 2139 235 132 65 chr10 84249942 84250151 -61339137 + HAL1 LINE L1 406 600 -1907 230 0 33 0 chr10 84250151 84250181 -61339107 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2139 235 132 65 chr10 84250181 84250482 -61338806 + HAL1 LINE L1 600 1004 -1503 1621 122 12 4 chr10 84250482 84250761 -61338527 + AluSx SINE Alu 33 313 0 2139 235 132 65 chr10 84250761 84250804 -61338484 + HAL1 LINE L1 1004 1043 -1464 527 160 0 0 chr10 84250835 84250910 -61338378 - 7SLRNA srpRNA srpRNA -22 298 224 1011 191 58 85 chr10 84251042 84251147 -61338141 - HAL1 LINE L1 -1105 1402 1296 2087 100 0 4 chr10 84251147 84251452 -61337836 - AluSg SINE Alu 0 304 1 1011 191 58 85 chr10 84251452 84251721 -61337567 - HAL1 LINE L1 -1211 1296 1037 1724 166 17 3 chr10 84251744 84252046 -61337242 + AluJo SINE Alu 1 306 -6 1208 166 29 0 chr10 84252118 84252323 -61336965 + 7SLRNA srpRNA srpRNA 1 211 -109 2099 101 14 0 chr10 84252921 84253218 -61336070 - AluSq SINE Alu -12 301 1 708 110 0 73 chr10 84253494 84253603 -61335685 + 7SLRNA srpRNA srpRNA 198 298 -22 425 157 0 0 chr10 84253890 84253960 -61335328 - AluS SINE Alu -243 70 1 836 150 0 0 chr10 84253968 84254101 -61335187 + AluSg/x SINE Alu 159 291 -19 521 209 0 101 chr10 84254123 84254252 -61335036 + MLT1E2 LTR MaLR 1 116 -510 1259 120 0 5 chr10 84254252 84254444 -61334844 + AluSg/x SINE Alu 122 312 0 2195 115 3 3 chr10 84254455 84254768 -61334520 + AluSp SINE Alu 1 313 0 2147 185 79 25 chr10 84254782 84255213 -61334075 + MLT1E2 LTR MaLR 116 562 -62 2262 93 3 0 chr10 84255213 84255523 -61333765 - AluY SINE Alu 0 311 1 2147 185 79 25 chr10 84255523 84255588 -61333700 + MLT1E2 LTR MaLR 562 622 -2 296 293 9 86 chr10 84255590 84255706 -61333582 + L2 LINE L2 3145 3251 -21 2231 107 0 0 chr10 84256525 84256834 -61332454 + AluSc SINE Alu 1 309 0 247 283 0 0 chr10 84256990 84257043 -61332245 - L2 LINE L2 -18 3295 3243 263 294 227 0 chr10 84257047 84257166 -61332122 - MIR3 SINE MIR -62 146 1 229 293 38 47 chr10 84257806 84257912 -61331376 + L2 LINE L2 3208 3312 -1 457 261 100 44 chr10 84258048 84258083 -61331205 + L2 LINE L2 3114 3146 -167 2072 80 36 36 chr10 84258083 84258385 -61330903 - AluSq SINE Alu -11 302 1 457 261 100 44 chr10 84258385 84258529 -61330759 + L2 LINE L2 3146 3303 -10 1745 127 55 10 chr10 84258529 84258820 -61330468 + AluJo SINE Alu 1 304 -8 437 313 8 0 chr10 84259015 84259146 -61330142 - MIR SINE MIR -14 248 117 2141 89 30 0 chr10 84259274 84259578 -61329710 + AluSq SINE Alu 1 313 0 200 306 16 16 chr10 84259913 84259975 -61329313 - MIR SINE MIR -138 124 63 2048 173 20 50 chr10 84260262 84260765 -61328523 + MER89 LTR ERV1 4 559 0 190 273 0 36 chr10 84260771 84260826 -61328462 + MIR SINE MIR 98 150 -112 211 241 25 89 chr10 84260966 84261045 -61328243 - MIR3 SINE MIR -47 161 88 653 252 44 53 chr10 84261488 84261714 -61327574 - MIR SINE MIR -32 230 7 1417 178 71 4 chr10 84261759 84261878 -61327410 + AluJo SINE Alu 1 111 -201 207 0 0 0 chr10 84261878 84261901 -61327387 + (TAAAA)n Simple_repeat Simple_repeat 4 26 0 1417 178 71 4 chr10 84261901 84262062 -61327226 + AluJo SINE Alu 111 300 -12 1547 171 0 26 chr10 84262440 84262750 -61326538 - AluJo SINE Alu -10 302 1 2085 91 0 57 chr10 84262758 84262939 -61326349 - AluSq SINE Alu -12 301 144 2079 118 3 13 chr10 84262939 84263252 -61326036 - AluSg SINE Alu 0 310 1 2085 91 0 57 chr10 84263252 84263388 -61325900 - AluSq SINE Alu -169 144 2 182 200 67 0 chr10 84263581 84263626 -61325662 - L2 LINE L2 -3189 125 78 234 253 40 0 chr10 84264102 84264177 -61325111 - L1ME3A LINE L1 -87 6083 6006 2148 104 3 19 chr10 84264255 84264572 -61324716 - AluSx SINE Alu 0 312 1 2130 107 3 19 chr10 84264583 84264900 -61324388 - AluSx SINE Alu 0 312 1 472 291 129 22 chr10 84264989 84265304 -61323984 - L1ME3A LINE L1 -279 5899 5559 2206 100 0 3 chr10 84265443 84265743 -61323545 + AluY SINE Alu 1 299 -12 755 193 0 0 chr10 84265780 84265915 -61323373 + FRAM SINE Alu 40 174 -2 1997 140 7 0 chr10 84265993 84266301 -61322987 + AluSx SINE Alu 1 310 -2 21 0 0 0 chr10 84266304 84266325 -61322963 + AT_rich Low_complexity Low_complexity 1 21 0 1645 243 96 13 chr10 84266325 84266773 -61322515 - MLT1J LTR MaLR -24 487 3 1851 122 14 0 chr10 84266903 84267209 -61322079 - AluSq SINE Alu 0 313 4 1357 181 65 0 chr10 84267329 84267606 -61321682 - AluSx SINE Alu -17 295 1 757 226 0 7 chr10 84267643 84267789 -61321499 - FRAM SINE Alu -31 145 1 1080 135 43 34 chr10 84267816 84268024 -61321264 - AluJo SINE Alu -27 285 76 709 201 41 35 chr10 84268142 84268311 -61320977 + AluJb SINE Alu 134 303 -9 2029 142 3 3 chr10 84268361 84268671 -61320617 - AluSx SINE Alu 0 312 3 661 249 26 21 chr10 84269111 84269300 -61319988 - MIR SINE MIR 0 262 73 698 82 123 41 chr10 84269311 84269433 -61319855 + FLAM_C SINE Alu 2 133 0 190 310 69 0 chr10 84269451 84269509 -61319779 - MIR SINE MIR -184 78 17 242 217 83 17 chr10 84269554 84269614 -61319674 + L2 LINE L2 3205 3268 -4 2396 81 0 0 chr10 84269965 84270274 -61319014 - AluSx SINE Alu -3 309 1 412 239 45 0 chr10 84270292 84270380 -61318908 + L2 LINE L2 3221 3312 -1 1966 135 0 25 chr10 84271971 84272290 -61316998 - AluJb SINE Alu -1 311 1 182 376 43 11 chr10 84273545 84273638 -61315650 + MIR SINE MIR 19 114 -94 2297 76 0 10 chr10 84274521 84274822 -61314466 - AluSg SINE Alu -12 298 1 657 154 45 0 chr10 84274855 84274965 -61314323 - FLAM_A SINE Alu -16 117 3 364 309 103 6 chr10 84276440 84276615 -61312673 + L1ME4a LINE L1 5717 5908 -213 2473 46 0 46 chr10 84277604 84277928 -61311360 + AluY SINE Alu 1 309 -2 645 183 18 59 chr10 84278713 84278882 -61310406 - MER106B DNA MER1_type 0 1059 898 259 280 60 30 chr10 84279386 84279486 -61309802 - L2 LINE L2 -7 3265 3163 1781 84 4 8 chr10 84280264 84280503 -61308785 - AluY SINE Alu -73 238 1 1861 88 0 0 chr10 84284101 84284341 -61304947 + AluSx SINE Alu 1 240 -72 299 336 76 8 chr10 84285298 84285417 -61303871 + L2 LINE L2 3146 3272 0 2179 98 10 0 chr10 84286480 84286776 -61302512 - AluSx SINE Alu -13 299 1 1990 116 0 7 chr10 84287389 84287674 -61301614 - AluSx SINE Alu -16 296 14 368 309 94 36 chr10 84287729 84288002 -61301286 - L1MC/D LINE L1 -457 5664 5510 1385 185 12 62 chr10 84288125 84288298 -61300990 - AluJo SINE Alu -3 309 158 1853 107 0 0 chr10 84288298 84288550 -61300738 - AluSc SINE Alu -5 304 53 1385 185 12 62 chr10 84288550 84288701 -61300587 - AluJo SINE Alu -154 158 1 888 150 0 0 chr10 84288744 84288877 -61300411 - FLAM_C SINE Alu 0 133 1 33994 29 5 1 chr10 84290372 84295170 -61294118 + L1PA4 LINE L1 1337 6152 -3 488 247 75 7 chr10 84296385 84296531 -61292757 + L1MB7 LINE L1 6012 6167 -17 786 125 58 8 chr10 84296562 84296682 -61292606 - FLAM_C SINE Alu -16 127 2 1412 129 4 60 chr10 84297576 84297809 -61291479 - AluJb SINE Alu -92 220 1 1598 184 61 20 chr10 84298386 84298680 -61290608 - AluJo SINE Alu -6 306 1 2171 122 0 19 chr10 84299501 84299812 -61289476 + AluSx SINE Alu 1 305 -7 2120 112 0 62 chr10 84299814 84300137 -61289151 + AluSc SINE Alu 1 303 -6 1265 154 211 8 chr10 84301075 84301321 -61287967 + AluJb SINE Alu 1 296 -6 350 279 310 31 chr10 84301478 84301707 -61287581 + HAL1 LINE L1 272 564 -1943 1708 224 111 54 chr10 84301754 84301977 -61287311 + HAL1 LINE L1 796 1005 -1502 2451 89 3 0 chr10 84301977 84302281 -61287007 + AluSx SINE Alu 3 307 -5 1708 224 111 54 chr10 84302281 84302697 -61286591 + HAL1 LINE L1 1005 1493 -1014 1418 159 191 0 chr10 84302697 84302948 -61286340 + AluJb SINE Alu 1 299 -3 1708 224 111 54 chr10 84302948 84303117 -61286171 + HAL1 LINE L1 1493 1651 -856 180 0 0 0 chr10 84303152 84303172 -61286116 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 253 252 0 122 chr10 84303970 84304077 -61285211 + MIR SINE MIR 118 211 -51 904 117 0 29 chr10 84304588 84304725 -61284563 + FLAM_C SINE Alu 1 133 0 2316 105 13 0 chr10 84304735 84305039 -61284249 + AluSx SINE Alu 1 308 -4 329 171 35 206 chr10 84305971 84306141 -61283147 + L2 LINE L2 3173 3313 0 186 43 0 0 chr10 84306153 84306176 -61283112 + (A)n Simple_repeat Simple_repeat 1 23 0 208 206 132 29 chr10 84306498 84306566 -61282722 + MIR3 SINE MIR 5 79 -129 1916 154 3 13 chr10 84306703 84307008 -61282280 - AluJb SINE Alu -10 302 1 2327 118 3 0 chr10 84307943 84308249 -61281039 + AluSq SINE Alu 1 307 -6 1018 146 61 6 chr10 84308249 84308413 -61280875 + AluSg/x SINE Alu 134 306 -6 2462 80 0 13 chr10 84308415 84308729 -61280559 + AluSx SINE Alu 1 310 -2 2068 164 34 51 chr10 84309174 84309643 -61279645 - MLT1C LTR MaLR -6 461 1 1791 161 7 14 chr10 84309726 84310017 -61279271 + AluJo SINE Alu 3 291 -21 2168 130 0 3 chr10 84310018 84310319 -61278969 - AluSx SINE Alu -12 300 1 27 108 0 0 chr10 84311955 84312066 -61277222 + GC_rich Low_complexity Low_complexity 1 111 0 23 0 9 0 chr10 84312130 84312192 -61277096 + GC_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr10 84312226 84312256 -61277032 + GC_rich Low_complexity Low_complexity 1 30 0 294 106 0 0 chr10 84312262 84312309 -61276979 + (TCC)n Simple_repeat Simple_repeat 1 47 0 32 43 0 0 chr10 84312372 84312418 -61276870 + GC_rich Low_complexity Low_complexity 1 46 0 42 48 0 0 chr10 84312477 84312540 -61276748 + GC_rich Low_complexity Low_complexity 1 63 0 578 247 0 0 chr10 84313090 84313187 -61276101 + G-rich Low_complexity Low_complexity 1 97 0 522 192 41 0 chr10 84313188 84313334 -61275954 + A-rich Low_complexity Low_complexity 5 156 0 1910 140 7 3 chr10 84313485 84313777 -61275511 + AluJb SINE Alu 2 294 -18 2223 130 0 0 chr10 84313870 84314171 -61275117 - AluSx SINE Alu -11 301 1 233 226 151 32 chr10 84314823 84314916 -61274372 + MIR SINE MIR 80 183 -79 204 242 211 16 chr10 84315205 84315333 -61273955 + MIR SINE MIR 104 256 -6 22 56 0 0 chr10 84316336 84316372 -61272916 + AT_rich Low_complexity Low_complexity 1 36 0 2133 138 0 0 chr10 84316760 84317057 -61272231 - AluJb SINE Alu -10 302 6 1762 101 0 0 chr10 84317999 84318218 -61271070 + AluSg/x SINE Alu 85 303 -9 252 273 43 36 chr10 84318266 84318405 -61270883 + L1MC4 LINE L1 6941 7080 -962 2001 116 43 0 chr10 84318466 84318743 -61270545 - AluSg SINE Alu -21 289 1 24 0 0 0 chr10 84318748 84318772 -61270516 + AT_rich Low_complexity Low_complexity 1 24 0 319 253 50 71 chr10 84318823 84319021 -61270267 + L1MC5 LINE L1 7027 7220 -741 419 272 60 74 chr10 84319021 84319238 -61270050 + L1MC5 LINE L1 7530 7743 -218 351 235 0 20 chr10 84319263 84319365 -61269923 + L1MC5 LINE L1 7808 7907 -54 2211 112 17 3 chr10 84319366 84319662 -61269626 - AluSx SINE Alu -12 300 1 957 210 6 0 chr10 84319685 84319852 -61269436 - FAM SINE Alu -10 175 8 1423 190 16 45 chr10 84320325 84320474 -61268814 + AluJo SINE Alu 1 138 -174 2174 132 0 0 chr10 84320474 84320769 -61268519 + AluSx SINE Alu 5 299 -13 1423 190 16 45 chr10 84320769 84320929 -61268359 + AluJo SINE Alu 138 301 -11 34 0 0 0 chr10 84321061 84321095 -61268193 + AT_rich Low_complexity Low_complexity 1 34 0 1649 147 10 73 chr10 84321199 84321499 -61267789 + AluJb SINE Alu 16 296 -16 301 158 107 57 chr10 84321846 84321934 -61267354 - HsTC2 DNA Tc2 -3 1895 1813 1762 174 17 7 chr10 84321934 84322228 -61267060 + AluJb SINE Alu 5 301 -11 301 158 107 57 chr10 84322228 84322257 -61267031 - HsTC2 DNA Tc2 -85 1813 1787 2148 136 0 0 chr10 84322257 84322552 -61266736 + AluSg SINE Alu 1 295 -15 301 158 107 57 chr10 84322552 84322581 -61266707 - HsTC2 DNA Tc2 -111 1787 39 3141 170 60 26 chr10 84322754 84323420 -61265868 + L1MB7 LINE L1 5339 6029 -155 2070 122 7 13 chr10 84323420 84323723 -61265565 - AluSx SINE Alu -11 301 1 3141 170 60 26 chr10 84323723 84323767 -61265521 + L1MB7 LINE L1 6029 6070 -114 1041 177 62 66 chr10 84323771 84323997 -61265291 + AluJo SINE Alu 51 275 -37 727 173 8 0 chr10 84324005 84324138 -61265150 + L1MB7 LINE L1 6046 6179 -5 203 302 16 0 chr10 84324458 84324521 -61264767 + GA-rich Low_complexity Low_complexity 4 67 0 396 298 24 24 chr10 84324686 84324854 -61264434 + MLT1J2 LTR MaLR 1 168 -282 436 226 38 0 chr10 84324904 84325010 -61264278 - MER96 DNA MER1_type? -63 112 3 254 339 38 22 chr10 84325055 84325238 -61264050 + MLT1L LTR MaLR 430 615 0 212 375 31 0 chr10 84325465 84325561 -61263727 + MIR SINE MIR 24 122 -140 2262 101 17 0 chr10 84325736 84326033 -61263255 - AluSg SINE Alu -8 302 1 394 309 13 33 chr10 84326575 84326727 -61262561 - MIR3 SINE MIR -15 193 45 1048 149 21 46 chr10 84327303 84327367 -61261921 - MER5A DNA MER1_type 0 189 125 1830 92 78 35 chr10 84327367 84327649 -61261639 + AluSq SINE Alu 1 294 -19 1048 149 21 46 chr10 84327649 84327778 -61261510 - MER5A DNA MER1_type -64 125 1 757 201 63 17 chr10 84327876 84327978 -61261310 + MIR SINE MIR 78 193 -69 2184 97 13 36 chr10 84327978 84328286 -61261002 + AluSx SINE Alu 1 301 -11 757 201 63 17 chr10 84328286 84328357 -61260931 + MIR SINE MIR 193 259 -3 220 259 0 19 chr10 84328434 84328488 -61260800 - L3 LINE CR1 -9 1568 1516 391 202 26 61 chr10 84328530 84328619 -61260669 + MER5A DNA MER1_type 39 125 -64 2201 117 10 0 chr10 84328619 84328910 -61260378 - AluSx SINE Alu -18 294 1 391 202 26 61 chr10 84328910 84328934 -61260354 + MER5A DNA MER1_type 125 148 -41 1513 133 0 5 chr10 84328934 84329152 -61260136 + AluSg/x SINE Alu 83 299 -11 275 372 8 25 chr10 84329206 84329327 -61259961 - MIR SINE MIR -71 137 19 2185 94 10 3 chr10 84329346 84329634 -61259654 + AluSp SINE Alu 1 290 -23 181 346 65 28 chr10 84329645 84329752 -61259536 - L3 LINE CR1 -34 1543 1433 246 315 0 0 chr10 84329837 84329910 -61259378 + L2 LINE L2 2779 2851 -463 1150 168 254 6 chr10 84330435 84330781 -61258507 - Tigger7 DNA MER2_type 0 2487 2056 182 229 125 0 chr10 84331005 84331053 -61258235 + L2 LINE L2 3200 3253 -19 248 299 80 0 chr10 84331170 84331283 -61258005 + MIR SINE MIR 7 129 -79 2411 70 7 0 chr10 84331330 84331617 -61257671 + AluY SINE Alu 1 289 -22 358 239 73 28 chr10 84332449 84332558 -61256730 - Charlie8 DNA MER1_type -2216 201 88 219 69 0 0 chr10 84332883 84332912 -61256376 + (CATCC)n Simple_repeat Simple_repeat 3 31 0 604 160 92 34 chr10 84333503 84333622 -61255666 + AluJo/FLAM SINE Alu 2 127 -175 289 194 57 40 chr10 84333625 84333718 -61255570 - AluJ/FLAM SINE Alu -215 87 7 1490 198 65 0 chr10 84335701 84335979 -61253309 + AluJb SINE Alu 1 296 -16 24 32 0 0 chr10 84336062 84336093 -61253195 + AT_rich Low_complexity Low_complexity 1 31 0 366 68 305 0 chr10 84336469 84336528 -61252760 + MADE1 DNA Mariner 4 80 0 207 0 0 0 chr10 84336709 84336732 -61252556 + (A)n Simple_repeat Simple_repeat 1 23 0 332 309 20 46 chr10 84337879 84338031 -61251257 + L2 LINE L2 2934 3081 -232 2158 116 0 10 chr10 84338031 84338325 -61250963 + AluSg SINE Alu 1 291 -19 180 238 267 20 chr10 84338450 84338551 -61250737 + L2 LINE L2 3173 3298 -15 953 197 27 49 chr10 84339537 84339760 -61249528 - MER20 DNA MER1_type 0 219 2 2293 86 6 6 chr10 84341334 84341454 -61247834 + AluSq SINE Alu 1 120 -193 189 0 0 0 chr10 84341454 84341475 -61247813 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 2293 86 6 6 chr10 84341475 84341667 -61247621 + AluSq SINE Alu 119 313 0 2262 108 3 6 chr10 84341683 84341997 -61247291 + AluSq SINE Alu 1 313 0 1736 163 13 22 chr10 84342138 84342451 -61246837 - AluSx SINE Alu -2 310 1 402 152 95 0 chr10 84343015 84343120 -61246168 - L1M4 LINE L1 -841 5305 5191 2144 113 0 0 chr10 84343124 84343431 -61245857 - AluSx SINE Alu 0 307 1 345 276 97 30 chr10 84343495 84343629 -61245659 - MIR SINE MIR 0 262 120 * 364 293 162 69 chr10 84343608 84343975 -61245313 + L3 LINE CR1 947 1375 -202 2158 131 3 6 chr10 84343975 84344288 -61245000 + AluSq SINE Alu 1 312 -1 364 293 162 69 chr10 84344288 84344426 -61244862 + L3 LINE CR1 1375 1499 -78 266 195 17 119 chr10 84344831 84344949 -61244339 - Charlie8 DNA MER1_type -2256 161 56 2171 137 40 0 chr10 84345335 84345685 -61243603 + THE1B LTR MaLR 1 364 0 181 246 46 62 chr10 84346032 84346097 -61243191 + L3 LINE CR1 1286 1349 -228 1900 198 80 2 chr10 84346233 84346722 -61242566 + L1MB2 LINE L1 5555 6116 -55 269 333 98 11 chr10 84347073 84347247 -61242041 + MIR SINE MIR 65 253 -9 311 186 32 129 chr10 84348948 84349072 -61240216 + L1ME LINE L1 5591 5702 -419 1622 174 10 23 chr10 84349294 84349599 -61239689 + AluJb SINE Alu 1 301 -11 1388 149 37 40 chr10 84349732 84350055 -61239233 + MER33 DNA MER1_type 3 324 0 1334 92 31 25 chr10 84350227 84350423 -61238865 + THE1C LTR MaLR 1 197 -178 33280 97 15 59 chr10 84350423 84353645 -61235643 + L1PA7 LINE L1 14 3378 -2776 1958 115 31 0 chr10 84353645 84353931 -61235357 + AluSg1 SINE Alu 5 299 -10 33280 97 15 59 chr10 84353931 84355319 -61233969 + L1PA7 LINE L1 3378 4254 -1900 2686 10 0 3 chr10 84355319 84355625 -61233663 + AluYa5 SINE Alu 1 305 -6 33280 97 15 59 chr10 84355625 84357445 -61231843 + L1PA7 LINE L1 4254 6153 -1 1242 136 15 29 chr10 84357471 84357677 -61231611 + THE1C LTR MaLR 171 373 -2 1722 157 37 3 chr10 84357804 84358098 -61231190 + AluJo SINE Alu 1 304 -8 1883 189 14 82 chr10 84358115 84358629 -61230659 + MLT1D LTR MaLR 23 501 -4 2038 133 21 56 chr10 84358724 84359101 -61230187 + THE1B LTR MaLR 1 364 0 12026 99 1 0 chr10 84359101 84360679 -61228609 + THE1A-int LTR MaLR 1 1580 0 2050 133 8 61 chr10 84360679 84361054 -61228234 + THE1A LTR MaLR 1 355 0 395 228 40 0 chr10 84361342 84361443 -61227845 - MLT1I LTR MaLR -2 407 303 457 236 11 25 chr10 84361455 84361576 -61227712 - MLT1I LTR MaLR -274 135 27 2111 127 3 0 chr10 84361800 84362108 -61227180 + AluSx SINE Alu 1 309 -3 550 269 19 13 chr10 84362169 84362325 -61226963 - MIR SINE MIR -72 190 34 1467 173 46 21 chr10 84362341 84362495 -61226793 - AluJb SINE Alu -21 291 142 207 0 0 0 chr10 84362495 84362518 -61226770 + (TTAA)n Simple_repeat Simple_repeat 2 24 0 1467 173 46 21 chr10 84362518 84362533 -61226755 - AluJb SINE Alu -170 142 129 2388 112 8 17 chr10 84362533 84362891 -61226397 - THE1A LTR MaLR 0 355 1 1467 173 46 21 chr10 84362891 84363004 -61226284 - AluJb SINE Alu -183 129 1 701 238 78 26 chr10 84363157 84363350 -61225938 - MIR SINE MIR -20 242 40 2945 85 63 35 chr10 84364007 84364141 -61225147 - MER101 LTR ERV1 0 474 345 2030 138 0 0 chr10 84364141 84364438 -61224850 - AluJo SINE Alu -15 297 1 2945 85 63 35 chr10 84364438 84364763 -61224525 - MER101 LTR ERV1 -129 345 2 637 267 62 19 chr10 84365739 84365949 -61223339 + MLT1K LTR MaLR 90 308 -280 625 180 29 101 chr10 84365950 84366227 -61223061 - L1ME2 LINE L1 -14 6150 5928 * 1090 249 101 12 chr10 84366216 84366630 -61222658 - L1M4 LINE L1 -1319 4827 4377 1904 139 7 10 chr10 84366639 84366940 -61222348 - AluSx SINE Alu -11 301 2 313 320 97 3 chr10 84367467 84367619 -61221669 + MIR3 SINE MIR 8 176 -32 21 0 0 0 chr10 84367921 84367942 -61221346 + AT_rich Low_complexity Low_complexity 1 21 0 2256 109 0 0 chr10 84367947 84368250 -61221038 + AluSx SINE Alu 1 303 -9 1442 158 26 53 chr10 84368255 84368559 -61220729 + AluJo SINE Alu 1 296 -16 2294 86 0 0 chr10 84368562 84368865 -61220423 + AluY SINE Alu 1 303 -8 1478 183 17 7 chr10 84369033 84369322 -61219966 - AluJb SINE Alu -20 292 1 608 198 0 72 chr10 84369576 84369783 -61219505 - AluJb SINE Alu -118 194 3 311 186 32 129 chr10 84371048 84371172 -61218116 + L1ME LINE L1 5591 5702 -419 2117 122 0 0 chr10 84371394 84371689 -61217599 + AluSp SINE Alu 1 295 -18 1712 152 14 0 chr10 84371697 84371987 -61217301 + AluSx SINE Alu 1 294 -18 1621 161 16 20 chr10 84372020 84372350 -61216938 + AluJo SINE Alu 5 312 0 802 169 0 22 chr10 84372373 84372509 -61216779 + FLAM_C SINE Alu 1 133 0 1906 133 3 26 chr10 84372599 84372907 -61216381 + AluSx SINE Alu 1 301 -11 837 303 92 36 chr10 84374878 84375453 -61213835 + L2 LINE L2 1794 2400 -914 608 314 241 10 chr10 84375441 84375877 -61213411 - L2 LINE L2 0 3313 2778 * 1114 93 0 7 chr10 84375896 84376047 -61213241 + AluY SINE Alu 1 150 -161 2067 106 0 26 chr10 84376073 84376376 -61212912 - AluSg SINE Alu -15 295 1 1742 137 28 0 chr10 84377038 84377322 -61211966 - AluSx SINE Alu -20 292 1 2268 81 0 7 chr10 84379043 84379350 -61209938 + AluSx SINE Alu 3 307 -5 1431 197 4 0 chr10 84379462 84379711 -61209577 + MER47A DNA MER2_type 1 250 -116 1887 148 0 3 chr10 84379711 84380008 -61209280 + AluJb SINE Alu 1 296 -16 649 363 71 19 chr10 84380841 84381252 -61208036 + L2 LINE L2 2837 3268 -4 243 0 0 0 chr10 84381571 84381598 -61207690 + (T)n Simple_repeat Simple_repeat 1 27 0 1503 68 5 0 chr10 84381888 84382080 -61207208 + L1PA7 LINE L1 5958 6150 -4 29 28 0 0 chr10 84382121 84382157 -61207131 + AT_rich Low_complexity Low_complexity 1 36 0 2405 69 0 0 chr10 84383078 84383384 -61205904 + AluY SINE Alu 1 306 -5 261 0 0 0 chr10 84384571 84384600 -61204688 + (CA)n Simple_repeat Simple_repeat 2 30 0 1446 176 75 103 chr10 84384662 84384744 -61204544 + Charlie4a DNA MER1_type 16 99 -1862 2089 75 38 7 chr10 84384744 84385037 -61204251 - AluSp SINE Alu -11 302 1 1446 176 75 103 chr10 84385037 84385459 -61203829 + Charlie4a DNA MER1_type 99 506 -2 836 129 7 14 chr10 84385838 84385977 -61203311 + AluJo SINE Alu 1 138 -174 1735 153 3 17 chr10 84385978 84386273 -61203015 + AluJo SINE Alu 1 291 -21 357 253 91 10 chr10 84386274 84386373 -61202915 + L1MC4 LINE L1 6614 6720 -1322 315 255 53 32 chr10 84386300 84386394 -61202894 - L1MC4 LINE L1 -1333 6709 6614 * 1081 158 0 0 chr10 84386419 84386596 -61202692 + AluJo SINE Alu 134 310 -2 582 117 11 21 chr10 84387020 84387114 -61202174 - FLAM_A SINE Alu -4 138 46 1016 136 19 0 chr10 84387237 84387399 -61201889 - AluSc SINE Alu -10 299 135 444 271 103 45 chr10 84387413 84387680 -61201608 - MLT1K LTR MaLR -15 573 318 346 177 25 25 chr10 84387730 84387809 -61201479 - MLT1K LTR MaLR -375 213 135 2081 116 0 0 chr10 84388213 84388506 -61200782 + AluSg SINE Alu 1 293 -17 220 304 191 0 chr10 84388518 84388633 -61200655 + MIR3 SINE MIR 43 179 -29 538 190 97 111 chr10 84388784 84389000 -61200288 - L2 LINE L2 -2 3311 3099 * 638 259 161 33 chr10 84388989 84389479 -61199809 - L2 LINE L2 -417 2897 2345 207 256 0 90 chr10 84389712 84389790 -61199498 + MIR3 SINE MIR 112 182 -26 249 266 31 0 chr10 84390663 84390727 -61198561 + MIR SINE MIR 193 258 -4 44240 29 21 1 chr10 84391044 84397073 -61192215 - L1PA2 LINE L1 -1 6154 2 271 279 0 90 chr10 84397083 84397205 -61192083 - MIR3 SINE MIR -1 207 97 401 268 21 0 chr10 84397508 84397605 -61191683 - MIR3 SINE MIR -43 165 67 369 0 0 0 chr10 84397944 84397985 -61191303 + (CA)n Simple_repeat Simple_repeat 2 42 0 2168 107 7 0 chr10 84399220 84399528 -61189760 - AluSx SINE Alu -2 310 1 1507 210 0 7 chr10 84400063 84400363 -61188925 + AluJo SINE Alu 1 298 -14 625 73 0 10 chr10 84400366 84400462 -61188826 + L1PB1 LINE L1 6056 6150 -1 39 22 0 0 chr10 84400462 84400508 -61188780 + AT_rich Low_complexity Low_complexity 1 46 0 320 272 66 44 chr10 84400932 84401068 -61188220 + MIR SINE MIR 26 164 -98 327 291 10 10 chr10 84401447 84401550 -61187738 + LTR67 LTR ERVL 434 536 -21 1158 109 239 17 chr10 84401734 84401972 -61187316 - AluSg1 SINE Alu -18 291 1 475 270 129 30 chr10 84402150 84402383 -61186905 - MIR SINE MIR 0 262 7 192 107 0 0 chr10 84402569 84402597 -61186691 - MIR SINE MIR -148 60 33 504 242 78 20 chr10 84403847 84403998 -61185290 + MER115 DNA AcHobo 5 164 -529 537 263 46 0 chr10 84403998 84404150 -61185138 + MER3 DNA MER1_type 1 159 -50 190 269 37 112 chr10 84404324 84404566 -61184722 + L2 LINE L2 2836 3059 -213 2032 118 0 10 chr10 84404708 84404997 -61184291 + AluSg SINE Alu 1 286 -24 2049 119 0 0 chr10 84405326 84405620 -61183668 + AluSx SINE Alu 1 294 -18 624 208 44 0 chr10 84405661 84405677 -61183611 + MER5A DNA MER1_type 1 23 -166 213 327 95 24 chr10 84405677 84405845 -61183443 - MER5A DNA MER1_type -2 187 8 249 231 108 0 chr10 84407099 84407164 -61182124 + MIR SINE MIR 79 150 -112 194 260 0 0 chr10 84407274 84407324 -61181964 + MIR SINE MIR 148 197 -65 480 269 16 9 chr10 84408135 84408268 -61181020 - MIR SINE MIR -58 150 24 1638 164 0 35 chr10 84408268 84408578 -61180710 + AluJo SINE Alu 1 299 -13 480 269 16 9 chr10 84408578 84408597 -61180691 - MIR SINE MIR -184 24 7 972 113 0 0 chr10 84408683 84408816 -61180472 + AluSq/x SINE Alu 1 133 -179 213 39 0 0 chr10 84408817 84408843 -61180445 + (TCTCCC)n Simple_repeat Simple_repeat 1 26 0 537 294 34 39 chr10 84408858 84409062 -61180226 + MIR SINE MIR 47 249 -13 1472 175 3 26 chr10 84409080 84409383 -61179905 - AluSc SINE Alu -3 296 1 5430 27 0 2 chr10 84409916 84410536 -61178752 - L1PA4 LINE L1 -81 6074 5456 1007 58 0 109 chr10 84410542 84410698 -61178590 - AluY SINE Alu -172 139 1 465 315 89 5 chr10 84411733 84411936 -61177352 - MIR SINE MIR -41 221 2 1720 144 7 24 chr10 84413430 84413728 -61175560 - AluJo SINE Alu -19 293 1 223 348 0 0 chr10 84415037 84415106 -61174182 - MIR SINE MIR -19 243 175 278 257 122 0 chr10 84415157 84415231 -61174057 - L2 LINE L2 0 3272 3190 191 210 21 203 chr10 84415249 84415310 -61173978 - MIR SINE MIR -24 238 216 2188 88 3 7 chr10 84415310 84415606 -61173682 - AluSq SINE Alu -18 295 1 191 210 21 203 chr10 84415606 84415687 -61173601 - MIR SINE MIR -46 216 122 505 222 0 0 chr10 84415698 84415797 -61173491 - MIR SINE MIR -118 144 46 465 19 0 0 chr10 84416200 84416254 -61173034 + (TG)n Simple_repeat Simple_repeat 1 54 0 723 203 92 0 chr10 84416886 84417049 -61172239 - MIR SINE MIR -21 241 64 244 346 20 0 chr10 84417593 84417694 -61171594 - MIR3 SINE MIR -17 191 89 434 179 26 33 chr10 84417764 84417886 -61171402 - MIR SINE MIR -54 208 89 366 341 51 9 chr10 84418032 84418246 -61171042 + MIR SINE MIR 40 262 0 455 48 0 0 chr10 84418407 84418470 -61170818 - L1PB1 LINE L1 -2 6149 6087 3021 164 58 35 chr10 84418470 84418867 -61170421 - LTR26E LTR ERV1 0 622 205 2154 98 3 0 chr10 84418867 84419162 -61170126 - AluSx SINE Alu -16 296 1 3021 164 58 35 chr10 84419162 84419372 -61169916 - LTR26E LTR ERV1 -417 205 1 2356 152 85 52 chr10 84419398 84419805 -61169483 + MLT1D LTR MaLR 8 435 -70 2199 96 3 0 chr10 84419805 84420106 -61169182 - AluSg SINE Alu -8 302 1 2356 152 85 52 chr10 84420106 84420180 -61169108 + MLT1D LTR MaLR 435 505 0 1224 102 0 0 chr10 84420219 84420386 -61168902 - AluSg/x SINE Alu -13 299 133 10075 53 20 35 chr10 84420386 84421793 -61167495 - SVA Other Other 0 1386 1 4421 50 0 9 chr10 84422021 84422602 -61166686 - L1P LINE L1 -2991 3155 2580 324 265 116 51 chr10 84422604 84422819 -61166469 - L1M4c LINE L1 -5209 1175 947 233 229 29 14 chr10 84422863 84422933 -61166355 + CT-rich Low_complexity Low_complexity 5 75 0 1081 158 0 0 chr10 84423385 84423562 -61165726 - AluJo SINE Alu -2 310 134 217 200 22 0 chr10 84423563 84423608 -61165680 + (TA)n Simple_repeat Simple_repeat 2 47 0 354 260 70 10 chr10 84423608 84423708 -61165580 - L1MC4 LINE L1 -1322 6720 6615 1597 156 7 20 chr10 84423708 84424003 -61165285 - AluJo SINE Alu -21 291 1 481 239 14 22 chr10 84424004 84424142 -61165146 - AluJo SINE Alu -174 138 2 6371 41 6 14 chr10 84424467 84425279 -61164009 - L1P LINE L1 -866 5280 4475 230 293 112 26 chr10 84425788 84425904 -61163384 - L3 LINE CR1 -2 1575 1450 319 344 0 0 chr10 84426067 84426160 -61163128 - FLAM_A SINE Alu -1 132 40 501 275 19 18 chr10 84426173 84426464 -61162824 + CT-rich Low_complexity Low_complexity 1 291 0 231 345 0 0 chr10 84426465 84426520 -61162768 + polypyrimidine Low_complexity Low_complexity 4 58 0 435 239 11 33 chr10 84426522 84426706 -61162582 + CT-rich Low_complexity Low_complexity 1 180 0 581 222 0 0 chr10 84426981 84427089 -61162199 + Tigger3(Golem) DNA MER2_type 1 108 -2921 * 3183 134 36 10 chr10 84427080 84427664 -61161624 + Tigger3(Golem) DNA MER2_type 2277 2875 -154 1456 167 44 44 chr10 84427713 84428007 -61161281 + THE1C LTR MaLR 1 294 -81 1135 255 98 19 chr10 84428641 84429018 -61160270 + MLT1I LTR MaLR 1 407 -2 245 262 24 0 chr10 84429457 84429541 -61159747 + L1MCc LINE L1 25 110 -6313 399 279 36 68 chr10 84429679 84429930 -61159358 + L1MCc LINE L1 59 301 -6122 337 268 71 30 chr10 84430368 84430536 -61158752 + L1MCc LINE L1 1129 1303 -5120 501 275 110 20 chr10 84430700 84430900 -61158388 - L2 LINE L2 -12 3301 3084 361 301 130 25 chr10 84431531 84431736 -61157552 + MIR SINE MIR 11 234 -28 307 273 116 8 chr10 84431967 84432088 -61157200 - L1MEc LINE L1 -5437 959 826 1350 251 87 29 chr10 84433125 84433644 -61155644 - MLT1H LTR MaLR 0 549 1 475 66 0 0 chr10 84434109 84434170 -61155118 - THE1A LTR MaLR -294 61 1 7903 100 2 1 chr10 84434170 84435211 -61154077 - THE1A-int LTR MaLR 0 1580 539 19383 25 0 0 chr10 84435368 84438266 -61151022 + L1PA2 LINE L1 3133 6031 -124 234 302 0 0 chr10 84438281 84438324 -61150964 + G-rich Low_complexity Low_complexity 1 43 0 545 259 58 17 chr10 84438982 84439156 -61150132 + MLT1K LTR MaLR 405 585 -3 996 153 132 171 chr10 84439311 84439698 -61149590 + MLT1B LTR MaLR 1 388 -2 389 138 49 24 chr10 84439734 84439857 -61149431 + CT-rich Low_complexity Low_complexity 3 128 0 499 322 40 23 chr10 84440256 84440430 -61148858 - MIR SINE MIR -52 210 34 2316 217 31 6 chr10 84440657 84441290 -61147998 + MER99 DNA DNA 43 743 -85 203 358 53 76 chr10 84441404 84441706 -61147582 - L2 LINE L2 -168 3104 2810 267 264 77 11 chr10 84441743 84441834 -61147454 - MIR SINE MIR -85 177 81 188 328 0 0 chr10 84441962 84442020 -61147268 + L3 LINE CR1 1326 1383 -194 316 296 31 0 chr10 84442350 84442448 -61146840 + L3 LINE CR1 1381 1481 -96 209 182 91 61 chr10 84442421 84442487 -61146801 + MIR3 SINE MIR 135 202 -6 * 489 238 109 57 chr10 84443041 84443289 -61145999 + MLT1K LTR MaLR 92 352 -236 * 756 173 18 159 chr10 84443288 84443442 -61145846 + MLT1G1 LTR MaLR 402 516 -79 1811 136 7 0 chr10 84443442 84443715 -61145573 - AluSx SINE Alu -37 275 1 756 173 18 159 chr10 84443715 84443786 -61145502 + MLT1G1 LTR MaLR 516 595 0 348 319 34 60 chr10 84443838 84444078 -61145210 + L2 LINE L2 2715 2973 -299 258 226 179 10 chr10 84444181 84444359 -61144929 - HAL1 LINE L1 -1360 1147 932 1928 147 20 0 chr10 84444359 84444665 -61144623 - AluSx SINE Alu 0 312 1 258 226 179 10 chr10 84444665 84444681 -61144607 - HAL1 LINE L1 -1575 932 920 1602 206 92 20 chr10 84444703 84445139 -61144149 + MER31A LTR ERV1 1 533 -10 394 232 134 7 chr10 84445147 84445289 -61143999 - HAL1 LINE L1 -1577 930 771 318 255 53 21 chr10 84445702 84445796 -61143492 - HAL1 LINE L1 -2355 152 56 470 266 28 21 chr10 84445972 84446115 -61143173 + MIR SINE MIR 11 154 -108 197 281 31 16 chr10 84446207 84446271 -61143017 + L2 LINE L2 3163 3227 -86 274 302 68 26 chr10 84446380 84446572 -61142716 - L2 LINE L2 -787 2527 2328 616 198 6 37 chr10 84446881 84447043 -61142245 + L1MC5 LINE L1 7622 7778 -183 2357 211 25 2 chr10 84447052 84447579 -61141709 + L1M4 LINE L1 2226 2764 -3382 * 4011 211 28 17 chr10 84447574 84448387 -61140901 + L1M4 LINE L1 3153 3979 -2167 1143 241 104 23 chr10 84448387 84448819 -61140469 + MLT1C LTR MaLR 1 467 0 4011 211 28 17 chr10 84448819 84448981 -61140307 + L1M4 LINE L1 3979 4138 -2008 791 274 148 12 chr10 84449000 84449325 -61139963 - MLT1K LTR MaLR -30 558 190 344 314 128 38 chr10 84449330 84449620 -61139668 - HAL1b LINE L1 -696 652 337 1788 174 65 39 chr10 84449705 84450091 -61139197 - MSTD LTR MaLR 0 396 1 1068 202 30 0 chr10 84450720 84450918 -61138370 - MLT1A2 LTR MaLR 0 390 187 246 179 0 0 chr10 84450923 84450979 -61138309 + GA-rich Low_complexity Low_complexity 1 56 0 1104 119 23 17 chr10 84450980 84451157 -61138131 - MLT1A2 LTR MaLR -196 178 1 1507 135 9 26 chr10 84451503 84451805 -61137483 - MSTA LTR MaLR -89 339 1 444 233 20 135 chr10 84451837 84451957 -61137331 - L2 LINE L2 -1529 1785 1653 1916 164 0 13 chr10 84451957 84452261 -61137027 - AluJo SINE Alu -12 300 1 444 233 20 135 chr10 84452261 84452274 -61137014 - L2 LINE L2 -1661 1653 1640 1933 161 3 0 chr10 84452274 84452573 -61136715 - AluSx SINE Alu -12 300 1 444 233 20 135 chr10 84452573 84452683 -61136605 - L2 LINE L2 -1674 1640 1569 233 317 83 28 chr10 84452815 84452960 -61136328 + MIR SINE MIR 48 200 -62 533 289 134 34 chr10 84452978 84453365 -61135923 - L1ME4a LINE L1 -75 6046 5621 728 291 48 27 chr10 84453439 84453810 -61135478 + L3 LINE CR1 538 916 -661 242 254 79 35 chr10 84453860 84453974 -61135314 + L3 LINE CR1 1054 1172 -405 527 197 0 8 chr10 84454005 84454027 -61135261 + (TG)n Simple_repeat Simple_repeat 2 23 -99 2005 142 11 37 chr10 84454027 84454380 -61134908 - MER2 DNA MER2_type 0 344 1 2015 159 3 50 chr10 84454385 84454456 -61134832 + MER47A DNA MER2_type 1 74 -2249 2134 126 0 0 chr10 84454456 84454750 -61134538 - AluSx SINE Alu -18 294 1 2015 159 3 50 chr10 84454750 84455062 -61134226 + MER47A DNA MER2_type 74 366 0 527 197 0 8 chr10 84455062 84455155 -61134133 + (TG)n Simple_repeat Simple_repeat 27 122 0 23 0 0 0 chr10 84455155 84455178 -61134110 + AT_rich Low_complexity Low_complexity 1 23 0 646 209 9 0 chr10 84455194 84455335 -61133953 - FLAM_A SINE Alu 0 143 2 875 147 11 40 chr10 84455336 84455513 -61133775 - Charlie5 DNA MER1_type -89 2523 2352 857 153 14 93 chr10 84455512 84455601 -61133687 - Charlie5 DNA MER1_type -2425 199 105 * 1966 143 3 3 chr10 84455601 84455930 -61133358 - AluSx SINE Alu 0 329 1 857 153 14 93 chr10 84455930 84456053 -61133235 - Charlie5 DNA MER1_type -2519 105 2 191 344 0 0 chr10 84456064 84456128 -61133160 + MER5A DNA MER1_type 126 189 0 242 343 0 19 chr10 84456151 84456256 -61133032 + L3 LINE CR1 1179 1281 -296 379 285 69 0 chr10 84456398 84456528 -61132760 + MIR SINE MIR 48 186 -76 287 324 19 0 chr10 84456515 84456620 -61132668 + L2 LINE L2 3195 3301 -12 * 1871 166 16 0 chr10 84456625 84456932 -61132356 + AluJo SINE Alu 1 312 0 391 267 30 30 chr10 84457928 84458093 -61131195 - MIR3 SINE MIR -3 205 41 949 224 56 0 chr10 84458105 84458301 -61130987 + MER63A DNA MER1_type 3 209 -1 788 287 39 10 chr10 84458343 84458718 -61130570 + MLT1K LTR MaLR 22 472 -116 308 302 35 43 chr10 84458849 84458965 -61130323 + L2 LINE L2 3151 3265 -7 597 336 68 17 chr10 84458968 84459263 -61130025 - MLT1I LTR MaLR 0 409 100 906 296 17 32 chr10 84459415 84459845 -61129443 + L1ME3A LINE L1 5594 6025 -96 22 0 0 0 chr10 84459925 84459947 -61129341 + AT_rich Low_complexity Low_complexity 1 22 0 842 265 135 57 chr10 84460952 84461492 -61127796 - MLT1K LTR MaLR -4 584 3 286 208 20 59 chr10 84461649 84461750 -61127538 - L1MC5 LINE L1 -32 7929 7833 501 281 60 36 chr10 84462049 84462383 -61126905 - L1M4 LINE L1 -1315 4831 4490 478 268 0 24 chr10 84462644 84462771 -61126517 + MIR SINE MIR 17 140 -68 221 328 181 0 chr10 84463089 84463266 -61126022 - MIR SINE MIR -3 259 51 215 260 26 13 chr10 84463704 84463781 -61125507 + MIR SINE MIR 66 143 -119 637 108 0 18 chr10 84463843 84463954 -61125334 + (TTCC)n Simple_repeat Simple_repeat 2 110 0 260 212 15 0 chr10 84463981 84464047 -61125241 + CT-rich Low_complexity Low_complexity 1 67 0 1868 153 47 7 chr10 84464061 84464361 -61124927 - AluJb SINE Alu 0 312 1 381 43 0 0 chr10 84464408 84464455 -61124833 + (TG)n Simple_repeat Simple_repeat 2 48 0 436 319 0 0 chr10 84464482 84464620 -61124668 + (TG)n Simple_repeat Simple_repeat 1 138 0 278 250 0 30 chr10 84464631 84464763 -61124525 + (TATATG)n Simple_repeat Simple_repeat 6 133 0 201 256 0 0 chr10 84464802 84464884 -61124404 + (TG)n Simple_repeat Simple_repeat 1 82 0 191 215 15 0 chr10 84464929 84464994 -61124294 + (TG)n Simple_repeat Simple_repeat 1 66 0 318 362 0 0 chr10 84465193 84465342 -61123946 + (TG)n Simple_repeat Simple_repeat 2 150 0 213 159 0 0 chr10 84465429 84465473 -61123815 + (TG)n Simple_repeat Simple_repeat 1 44 0 261 222 83 28 chr10 84467254 84467326 -61121962 + L2 LINE L2 3197 3272 0 275 175 16 16 chr10 84467975 84468038 -61121250 + L2 LINE L2 2997 3059 -213 5557 104 27 1 chr10 84468163 84468941 -61120347 + THE1C-int LTR MaLR 783 1580 0 2707 93 8 11 chr10 84468941 84469317 -61119971 + THE1C LTR MaLR 1 375 0 296 265 137 73 chr10 84469598 84470100 -61119188 - MLT1J LTR MaLR 0 511 34 351 0 0 0 chr10 84470555 84470594 -61118694 + (CA)n Simple_repeat Simple_repeat 1 39 0 273 278 40 76 chr10 84471702 84471900 -61117388 + MIR3 SINE MIR 13 203 -5 210 37 0 0 chr10 84472499 84472526 -61116762 + (TAGG)n Simple_repeat Simple_repeat 1 27 0 190 286 29 0 chr10 84472529 84472599 -61116689 + MIR SINE MIR 181 252 -10 599 254 134 23 chr10 84472626 84472843 -61116445 - MIR SINE MIR -15 247 7 1577 242 73 42 chr10 84473367 84473843 -61115445 + LTR16C LTR ERVL 1 491 0 274 197 33 33 chr10 84473847 84473908 -61115380 - MER103 DNA DNA -48 118 58 1636 184 43 60 chr10 84473919 84474288 -61115000 - MLT1A2 LTR MaLR -11 363 1 280 228 114 35 chr10 84474405 84474519 -61114769 - MIR3 SINE MIR -42 166 44 398 53 18 0 chr10 84475186 84475243 -61114045 + (TG)n Simple_repeat Simple_repeat 1 58 0 243 287 115 11 chr10 84475439 84475526 -61113762 + MIR SINE MIR 42 137 -71 674 246 144 69 chr10 84475907 84476212 -61113076 + MER102a DNA MER1_type 3 330 0 237 284 34 45 chr10 84476599 84476687 -61112601 - L2 LINE L2 0 3272 3186 1119 261 62 44 chr10 84476710 84477146 -61112142 - LTR16A1 LTR ERVL -13 444 1 310 329 77 38 chr10 84477325 84477638 -61111650 - ERVL LTR ERVL -436 5328 5004 3353 320 68 51 chr10 84477651 84478708 -61110580 - ERVL LTR ERVL -1514 4250 3212 1844 120 69 72 chr10 84478708 84479084 -61110204 + THE1C LTR MaLR 1 375 0 3353 320 68 51 chr10 84479084 84479863 -61109425 - ERVL LTR ERVL -2552 3212 2448 2200 107 21 0 chr10 84479863 84480154 -61109134 - AluSx SINE Alu -15 297 1 3353 320 68 51 chr10 84480154 84480847 -61108441 - ERVL LTR ERVL -3316 2448 1628 1160 203 9 5 chr10 84480847 84481069 -61108219 - MER58A DNA MER1_type -1 223 1 3353 320 68 51 chr10 84481069 84481361 -61107927 - ERVL LTR ERVL -4136 1628 1342 4818 170 33 30 chr10 84481436 84482902 -61106386 - L1MB5 LINE L1 -8 6166 4692 576 244 0 0 chr10 84483091 84483218 -61106070 - L1MB5 LINE L1 -1441 4705 4579 453 147 0 0 chr10 84483301 84483369 -61105919 - MER58 DNA MER1_type 0 2420 2353 1839 336 31 31 chr10 84483424 84484400 -61104888 - ERVL LTR ERVL -3924 1072 97 1186 217 93 37 chr10 84484468 84484823 -61104465 - LTR16A1 LTR ERVL 0 457 83 220 282 12 12 chr10 84484904 84484989 -61104299 - L2 LINE L2 -687 2627 2543 1758 166 0 11 chr10 84485028 84485312 -61103976 - AluJo SINE Alu -31 281 1 2456 232 7 32 chr10 84485322 84485598 -61103690 - L1ME1 LINE L1 0 6178 5897 1011 62 0 0 chr10 84485598 84485726 -61103562 - L1PA5 LINE L1 -4 6150 6023 2456 232 7 32 chr10 84485726 84486217 -61103071 - L1ME1 LINE L1 -281 5897 5449 301 185 15 0 chr10 84486217 84486282 -61103006 - L2 LINE L2 -771 2543 2478 379 283 8 8 chr10 84486286 84486406 -61102882 - L2 LINE L2 -2 3311 3192 263 258 34 45 chr10 84486582 84486671 -61102617 + MIR SINE MIR 67 154 -108 267 330 107 27 chr10 84487315 84487539 -61101749 - MIR SINE MIR -1 261 20 187 278 46 74 chr10 84487584 84487692 -61101596 + L2 LINE L2 2957 3061 -211 561 262 47 37 chr10 84487939 84488153 -61101135 + MIR SINE MIR 34 249 -13 2296 99 3 0 chr10 84488165 84488467 -61100821 - AluSc SINE Alu -6 303 1 205 176 0 0 chr10 84488596 84488630 -61100658 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 617 259 56 48 chr10 84489310 84489561 -61099727 + MLT1I LTR MaLR 128 380 -29 356 254 74 25 chr10 84489702 84489824 -61099464 - MIR3 SINE MIR -36 172 45 245 293 53 0 chr10 84490403 84490478 -61098810 - L2 LINE L2 0 3313 3235 375 318 146 17 chr10 84492051 84492290 -61096998 + MLT1K LTR MaLR 4 273 -315 247 264 55 33 chr10 84492390 84492481 -61096807 + MLT1K LTR MaLR 452 544 -44 483 267 84 25 chr10 84492792 84492994 -61096294 + MIR SINE MIR 15 228 -34 3570 200 39 11 chr10 84493543 84495065 -61094223 + L1ME1 LINE L1 4619 6332 -2 186 276 43 35 chr10 84495206 84495322 -61093966 + L2 LINE L2 2933 3049 -223 416 311 101 42 chr10 84495551 84495979 -61093309 + L2 LINE L2 2383 2835 -479 315 275 158 0 chr10 84496234 84496354 -61092934 + L2 LINE L2 3134 3272 0 266 185 77 15 chr10 84496455 84496520 -61092768 + MER104 DNA Tc2 44 112 -68 265 214 14 14 chr10 84496829 84496899 -61092389 + GA-rich Low_complexity Low_complexity 5 74 0 559 253 36 18 chr10 84497050 84497216 -61092072 + MIR SINE MIR 13 181 -81 1637 219 66 15 chr10 84497521 84497931 -61091357 + MER63B DNA MER1_type 2 432 -4 461 291 30 58 chr10 84498867 84499028 -61090260 + MIR SINE MIR 1 152 -110 1226 284 48 29 chr10 84499028 84499507 -61089781 + LTR16C LTR ERVL 2 489 -2 461 291 30 58 chr10 84499507 84499570 -61089718 + MIR SINE MIR 152 215 -47 275 346 94 32 chr10 84500469 84500778 -61088510 + L2 LINE L2 2566 2893 -421 2228 155 94 5 chr10 84501841 84502234 -61087054 + MSTA LTR MaLR 1 428 0 640 287 55 48 chr10 84502252 84502541 -61086747 + MER102b DNA MER1_type 7 297 -44 470 364 11 5 chr10 84502663 84502850 -61086438 - MIR3 SINE MIR -8 200 13 214 281 52 21 chr10 84504974 84505070 -61084218 + MIR3 SINE MIR 67 165 -43 251 305 0 0 chr10 84505215 84505274 -61084014 + (CCCTG)n Simple_repeat Simple_repeat 3 61 0 250 288 0 41 chr10 84505414 84505560 -61083728 + G-rich Low_complexity Low_complexity 3 142 0 720 281 15 0 chr10 84505794 84505990 -61083298 - MIR SINE MIR -1 261 63 244 290 122 8 chr10 84506447 84506578 -61082710 - MIR SINE MIR -9 253 108 273 316 145 3 chr10 84506833 84507115 -61082173 + L2 LINE L2 2421 2742 -572 423 346 93 25 chr10 84507219 84507540 -61081748 + L2 LINE L2 2930 3272 0 241 364 21 28 chr10 84507666 84507809 -61081479 + MIR SINE MIR 96 237 -25 194 333 44 18 chr10 84508395 84508509 -61080779 + MIR SINE MIR 134 250 -12 221 333 160 0 chr10 84509557 84509701 -61079587 + L3 LINE CR1 1187 1353 -224 893 235 0 0 chr10 84509723 84509885 -61079403 - FRAM SINE Alu -4 162 1 180 0 0 0 chr10 84509912 84509932 -61079356 + (TTA)n Simple_repeat Simple_repeat 2 21 0 213 241 92 46 chr10 84510015 84510102 -61079186 + L3 LINE CR1 1425 1515 -62 * 375 313 99 55 chr10 84510088 84510189 -61079099 - L2 LINE L2 -4 3268 3173 1384 183 103 71 chr10 84510189 84510567 -61078721 + MLT1B LTR MaLR 1 390 0 375 313 99 55 chr10 84510567 84510880 -61078408 - L2 LINE L2 -99 3173 2836 446 333 24 24 chr10 84510968 84511175 -61078113 + MIR SINE MIR 56 262 0 227 313 10 21 chr10 84511534 84511630 -61077658 + MIR SINE MIR 26 120 -88 348 314 72 7 chr10 84511803 84511956 -61077332 - MER5A DNA MER1_type -3 186 24 766 189 34 23 chr10 84512738 84512913 -61076375 + MER5B DNA MER1_type 1 177 -1 1165 193 28 9 chr10 84512924 84513137 -61076151 + MER20 DNA MER1_type 3 219 0 624 204 43 19 chr10 84513476 84513638 -61075650 - MLT1J LTR MaLR -65 446 281 239 188 47 129 chr10 84513717 84513802 -61075486 - MIR SINE MIR -84 178 101 1785 155 3 33 chr10 84514022 84514325 -61074963 - AluJo SINE Alu -18 294 1 367 236 217 25 chr10 84514329 84514400 -61074888 + MER5A DNA MER1_type 3 59 -130 2069 122 30 0 chr10 84514400 84514703 -61074585 + AluSx SINE Alu 1 312 0 367 236 217 25 chr10 84514703 84514788 -61074500 + MER5A DNA MER1_type 59 189 0 254 284 198 0 chr10 84515125 84515241 -61074047 - MLT1J1 LTR MaLR -249 197 59 257 206 145 38 chr10 84515262 84515393 -61073895 + L2 LINE L2 2830 2974 -339 673 221 81 0 chr10 84515554 84515703 -61073585 + MER5A DNA MER1_type 23 183 -6 259 300 82 20 chr10 84515953 84516154 -61073134 + MIR SINE MIR 6 221 -41 612 245 83 21 chr10 84516161 84516353 -61072935 - MIR SINE MIR -5 257 54 507 304 99 23 chr10 84517237 84517540 -61071748 + MER102b DNA MER1_type 16 341 0 402 265 10 0 chr10 84517990 84518087 -61071201 + L1MC4 LINE L1 1996 6983 -1339 341 278 42 21 chr10 84518782 84518926 -61070362 + MER117 DNA MER1_type 1 147 -50 279 328 128 16 chr10 84518939 84519054 -61070234 - MIR3 SINE MIR -49 159 28 1946 136 151 0 chr10 84519054 84519378 -61069910 + MER83C LTR ERV1 1 373 0 562 241 96 31 chr10 84519624 84519891 -61069397 - MLT1J2 LTR MaLR -132 314 23 325 245 53 0 chr10 84519899 84519985 -61069303 - MIR SINE MIR -115 147 54 1849 193 135 10 chr10 84519985 84520400 -61068888 - MLT1C LTR MaLR 0 467 1 304 328 17 8 chr10 84520444 84520563 -61068725 - L2 LINE L2 -202 3070 2951 275 341 71 51 chr10 84520708 84521060 -61068228 - L2 LINE L2 -11 3302 2944 262 309 81 13 chr10 84521762 84521911 -61067377 + MIR3 SINE MIR 3 161 -47 234 292 28 0 chr10 84522428 84522500 -61066788 + L2 LINE L2 3235 3308 -5 232 320 122 19 chr10 84522779 84522935 -61066353 - MIR SINE MIR -10 252 81 183 294 20 0 chr10 84523134 84523185 -61066103 - MIR SINE MIR -61 147 96 409 246 57 0 chr10 84523229 84523351 -61065937 + L2 LINE L2 3139 3267 -5 195 69 0 0 chr10 84523380 84523409 -61065879 + (GA)n Simple_repeat Simple_repeat 1 29 0 * 527 191 0 6 chr10 84523408 84523586 -61065702 + (TG)n Simple_repeat Simple_repeat 1 177 0 249 33 0 0 chr10 84523669 84523699 -61065589 + (GA)n Simple_repeat Simple_repeat 1 30 0 241 269 102 28 chr10 84523798 84523906 -61065382 - L2 LINE L2 -19 3294 3179 912 251 48 77 chr10 84523944 84524423 -61064865 - L2 LINE L2 -45 3268 2804 1374 245 86 28 chr10 84524847 84525275 -61064013 + MLT1C LTR MaLR 8 460 -7 291 250 0 0 chr10 84525809 84525869 -61063419 - MER94 DNA DNA 0 134 75 261 282 31 15 chr10 84526006 84526132 -61063156 - MIR SINE MIR -68 140 22 1561 164 3 30 chr10 84526542 84526847 -61062441 - AluJo SINE Alu -15 297 1 427 276 153 15 chr10 84526919 84527122 -61062166 + MER102b DNA MER1_type 111 341 0 494 333 86 18 chr10 84527425 84527761 -61061527 + L1MC4a LINE L1 5581 5939 -1869 678 256 28 19 chr10 84527761 84527976 -61061312 + MIR SINE MIR 46 262 0 265 268 73 85 chr10 84528167 84528331 -61060957 - L2 LINE L2 -191 3081 2920 328 283 0 11 chr10 84528506 84528598 -61060690 - MIR3 SINE MIR -52 156 66 390 280 47 27 chr10 84528711 84528861 -61060427 + L2 LINE L2 3161 3313 0 184 254 268 0 chr10 84529083 84529154 -61060134 - MIR3 SINE MIR -42 166 77 306 227 62 47 chr10 84529608 84529736 -61059552 + MIR SINE MIR 21 150 -112 619 250 11 19 chr10 84530259 84530494 -61058794 + MIR SINE MIR 31 262 0 374 258 101 8 chr10 84531014 84531136 -61058152 + MIR3 SINE MIR 33 157 -51 342 0 0 0 chr10 84531235 84531273 -61058015 + (TG)n Simple_repeat Simple_repeat 2 39 0 189 236 45 90 chr10 84531342 84531431 -61057857 + L2 LINE L2 3028 3112 -160 370 375 45 6 chr10 84532443 84532619 -61056669 + MIR SINE MIR 32 214 -48 233 213 319 0 chr10 84532634 84532728 -61056560 + MER5C DNA MER1_type 1 124 -200 194 234 43 85 chr10 84532739 84532833 -61056455 + MER5C DNA MER1_type 228 317 -7 225 154 0 0 chr10 84532879 84532918 -61056370 + (TCCA)n Simple_repeat Simple_repeat 4 42 0 903 164 0 0 chr10 84532921 84533092 -61056196 + (CCCA)n Simple_repeat Simple_repeat 1 171 0 834 255 27 0 chr10 84534386 84534570 -61054718 + MER5A DNA MER1_type 1 189 0 215 320 10 30 chr10 84534715 84534815 -61054473 + L3 LINE CR1 1069 1166 -411 252 358 67 15 chr10 84535745 84535879 -61053409 - L2 LINE L2 0 3272 3132 294 316 62 28 chr10 84536029 84536206 -61053082 - L2 LINE L2 -239 3033 2851 181 254 111 0 chr10 84537155 84537218 -61052070 + MIR SINE MIR 54 123 -85 25 0 0 0 chr10 84537990 84538015 -61051273 + AT_rich Low_complexity Low_complexity 1 25 0 406 347 79 0 chr10 84538382 84538572 -61050716 + MIR SINE MIR 8 212 -50 629 245 51 67 chr10 84539451 84539765 -61049523 - MLT1G1 LTR MaLR -286 309 1 370 322 51 0 chr10 84539869 84539987 -61049301 + MIR SINE MIR 59 182 -80 365 286 27 45 chr10 84540025 84540179 -61049109 - MIR SINE MIR -60 148 18 181 324 118 0 chr10 84540433 84540501 -61048787 - MIR SINE MIR -79 183 108 255 377 115 23 chr10 84541551 84541811 -61047477 + L3b LINE CR1 1287 1570 -13 532 163 37 89 chr10 84542643 84542833 -61046455 - L1ME4a LINE L1 0 6121 5942 539 327 25 0 chr10 84543059 84543261 -61046027 - L1MC4a LINE L1 -1873 5935 5729 321 135 0 0 chr10 84543262 84543314 -61045974 + (TG)n Simple_repeat Simple_repeat 1 52 0 331 217 84 12 chr10 84543643 84543726 -61045562 - MER103 DNA DNA -48 118 30 1447 223 78 48 chr10 84543755 84544231 -61045057 + LTR16C LTR ERVL 1 490 -1 520 286 68 14 chr10 84544245 84544465 -61044823 - L1ME LINE L1 -302 5819 5588 241 292 14 0 chr10 84544711 84544783 -61044505 + L2 LINE L2 2992 3064 -208 255 309 11 0 chr10 84545663 84545757 -61043531 + MIR SINE MIR 44 138 -70 253 231 0 0 chr10 84545823 84545875 -61043413 + LTR30 LTR ERV1 1 52 -670 1437 95 44 9 chr10 84545875 84546115 -61043173 + LTR12 LTR ERV1 57 1999 -439 235 344 16 0 chr10 84546115 84546240 -61043048 + LTR30 LTR ERV1 517 643 -79 726 120 0 0 chr10 84546242 84546342 -61042946 + LTR12 LTR ERV1 615 714 0 258 273 191 9 chr10 84546343 84546453 -61042835 + MIR3 SINE MIR 34 163 -45 620 273 29 0 chr10 84546973 84547112 -61042176 + MER63A DNA MER1_type 66 208 -2 536 269 122 0 chr10 84547191 84547347 -61041941 - MER117 DNA MER1_type -17 180 6 400 319 19 13 chr10 84547352 84547509 -61041779 - MIR3 SINE MIR -48 160 3 267 79 0 0 chr10 84547710 84547748 -61041540 + (TG)n Simple_repeat Simple_repeat 1 38 0 246 348 19 31 chr10 84548002 84548163 -61041125 + L2 LINE L2 3019 3177 -95 409 259 161 71 chr10 84548336 84548745 -61040543 - LTR67 LTR ERVL -3 554 109 * 427 375 16 5 chr10 84548732 84548924 -61040364 - LTR16C LTR ERVL -164 327 134 530 267 93 0 chr10 84549857 84550018 -61039270 + MIR SINE MIR 85 260 -2 332 276 57 9 chr10 84550029 84550134 -61039154 + MIR SINE MIR 126 235 -27 732 313 121 36 chr10 84550288 84550393 -61038895 - MLT1L LTR MaLR 0 615 520 945 224 55 24 chr10 84550393 84550647 -61038641 + MIR SINE MIR 1 262 0 732 313 121 36 chr10 84550647 84550989 -61038299 - MLT1L LTR MaLR -95 520 130 302 291 27 18 chr10 84551301 84551411 -61037877 - MIR SINE MIR -57 205 95 404 290 55 0 chr10 84551496 84551641 -61037647 + LTR16C LTR ERVL 137 289 -202 292 298 149 0 chr10 84551686 84551800 -61037488 + LTR16C LTR ERVL 360 490 -1 921 215 77 5 chr10 84552630 84552825 -61036463 - MER3 DNA MER1_type 0 209 1 424 302 7 0 chr10 84553212 84553351 -61035937 + (TGG)n Simple_repeat Simple_repeat 1 140 0 180 191 95 0 chr10 84553563 84553605 -61035683 + MIR SINE MIR 97 142 -66 21 0 0 0 chr10 84553617 84553638 -61035650 + AT_rich Low_complexity Low_complexity 1 21 0 477 262 7 35 chr10 84554110 84554251 -61035037 + MIR SINE MIR 118 254 -8 511 326 152 0 chr10 84555310 84555534 -61033754 + MIR SINE MIR 3 260 -2 182 157 0 59 chr10 84556378 84556429 -61032859 + (CACCAT)n Simple_repeat Simple_repeat 5 52 0 210 239 0 0 chr10 84556498 84556569 -61032719 + (CACCAT)n Simple_repeat Simple_repeat 1 71 0 324 200 0 0 chr10 84556656 84556731 -61032557 + (CCA)n Simple_repeat Simple_repeat 3 77 0 301 358 12 6 chr10 84556771 84556944 -61032344 + (CCA)n Simple_repeat Simple_repeat 3 176 0 324 278 196 23 chr10 84557172 84557345 -61031943 + MIR SINE MIR 1 203 -59 639 304 50 29 chr10 84557428 84557806 -61031482 + LTR16A1 LTR ERVL 50 435 -22 205 336 144 8 chr10 84557961 84558086 -61031202 - MIR3 SINE MIR -63 145 4 320 264 173 0 chr10 84558284 84558394 -61030894 + MIR3 SINE MIR 7 135 -73 207 289 26 26 chr10 84558686 84558762 -61030526 - L3 LINE CR1 -298 1279 1204 367 255 16 167 chr10 84558987 84559194 -61030094 + MIR SINE MIR 16 190 -72 2432 251 83 21 chr10 84560029 84561011 -61028277 - HAL1 LINE L1 -400 2107 1065 243 274 107 12 chr10 84561365 84561449 -61027839 + L2 LINE L2 3096 3187 -85 186 43 0 0 chr10 84561637 84561660 -61027628 + (CA)n Simple_repeat Simple_repeat 2 24 0 775 290 36 22 chr10 84562067 84562291 -61026997 - MIR SINE MIR -2 260 34 1625 140 12 81 chr10 84562348 84562669 -61026619 + AluSx SINE Alu 1 299 -13 194 383 21 35 chr10 84562944 84563085 -61026203 - MIR3 SINE MIR -29 179 41 697 295 145 5 chr10 84563399 84563793 -61025495 + L1ME3A LINE L1 5532 5977 -185 22 35 0 0 chr10 84563975 84564004 -61025284 + AT_rich Low_complexity Low_complexity 1 29 0 569 184 158 0 chr10 84564005 84564119 -61025169 - FLAM_C SINE Alu 0 133 2 2023 152 27 38 chr10 84564269 84564637 -61024651 + THE1B LTR MaLR 1 364 0 320 316 56 63 chr10 84565401 84565957 -61023331 - L1ME4a LINE L1 -274 5847 5296 1904 139 6 43 chr10 84566661 84566984 -61022304 - AluSx SINE Alu 0 312 2 1016 174 62 0 chr10 84567021 84567199 -61022089 + AluSg/x SINE Alu 121 309 -3 2620 189 58 17 chr10 84567231 84568231 -61021057 - L1MC4 LINE L1 -140 7902 6714 195 42 0 0 chr10 84568268 84568292 -61020996 + (TA)n Simple_repeat Simple_repeat 1 24 0 2777 96 0 0 chr10 84568293 84568648 -61020640 + THE1A LTR MaLR 1 355 0 3942 89 5 2 chr10 84568648 84569200 -61020088 + THE1A-int LTR MaLR 1 554 -1026 1152 259 47 39 chr10 84569351 84569734 -61019554 - MER66B-int LTR ERV1 -6094 582 197 871 152 112 61 chr10 84569910 84570199 -61019089 - MER66B LTR ERV1 0 486 196 240 250 0 0 chr10 84570702 84570754 -61018534 + MIR SINE MIR 72 123 -139 1043 137 10 68 chr10 84570969 84571174 -61018114 + AluSg/x SINE Alu 118 310 0 340 292 116 58 chr10 84571842 84572171 -61017117 + L1ME LINE L1 5259 5552 -569 186 367 39 0 chr10 84572342 84572470 -61016818 - L2 LINE L2 -818 2496 2364 379 286 102 0 chr10 84572800 84572947 -61016341 + L2 LINE L2 2922 3083 -230 294 148 0 0 chr10 84572992 84573046 -61016242 + (TTCC)n Simple_repeat Simple_repeat 2 55 0 296 265 31 31 chr10 84574527 84574625 -61014663 - L2 LINE L2 -58 3255 3158 1836 174 3 0 chr10 84574638 84574919 -61014369 + AluJo SINE Alu 11 295 -17 216 0 0 0 chr10 84574919 84574943 -61014345 + (GA)n Simple_repeat Simple_repeat 2 25 0 1836 174 3 0 chr10 84574943 84574960 -61014328 + AluJo SINE Alu 295 310 -2 522 108 0 0 chr10 84574964 84575047 -61014241 + (GGAA)n Simple_repeat Simple_repeat 1 83 0 439 311 58 29 chr10 84575798 84576039 -61013249 + L1 LINE L1 4730 4977 -1169 1929 86 100 11 chr10 84576041 84576310 -61012978 - AluY SINE Alu -18 293 1 2513 86 0 10 chr10 84576316 84576630 -61012658 - AluY SINE Alu 0 311 1 1752 196 0 7 chr10 84576656 84576962 -61012326 + AluJo SINE Alu 1 304 -8 787 246 94 5 chr10 84577644 84577847 -61011441 + MER58A DNA MER1_type 4 224 0 2215 139 19 6 chr10 84579249 84579609 -61009679 + MLT1A1 LTR MaLR 1 365 0 408 339 36 18 chr10 84579625 84579790 -61009498 + MIR SINE MIR 25 192 -70 882 211 53 11 chr10 84580417 84580607 -61008681 - MIR SINE MIR -48 214 17 448 201 61 104 chr10 84581077 84581241 -61008047 + L2 LINE L2 3155 3311 -2 815 204 122 10 chr10 84581262 84581458 -61007830 - MER20 DNA MER1_type 0 219 2 485 323 56 5 chr10 84582878 84583076 -61006212 + MIR SINE MIR 7 214 -48 450 331 18 18 chr10 84584152 84584321 -61004967 + MER5B DNA MER1_type 5 173 -5 861 284 106 50 chr10 84585146 84585646 -61003642 + MLT1K LTR MaLR 20 547 -41 213 356 58 0 chr10 84586794 84586898 -61002390 - MER5B DNA MER1_type -65 113 4 482 318 97 44 chr10 84587936 84588392 -61000896 + L2 LINE L2 1636 2115 -1199 1942 196 23 91 chr10 84588460 84588974 -61000314 + MLT-int LTR MaLR 453 931 -804 2881 139 2 2 chr10 84588978 84589416 -60999872 + MLT1A1-int LTR MaLR 1298 1735 0 1506 218 19 50 chr10 84589416 84589793 -60999495 + MLT1A1 LTR MaLR 1 365 0 612 329 122 25 chr10 84589800 84590274 -60999014 + L2 LINE L2 2239 2758 -556 693 288 11 27 chr10 84591288 84591505 -60997783 + MIR SINE MIR 40 254 -8 220 314 155 37 chr10 84591562 84591833 -60997455 + L2 LINE L2 2545 2847 -467 460 270 72 0 chr10 84592027 84592138 -60997150 + L2 LINE L2 3132 3250 -22 181 230 172 35 chr10 84593616 84593703 -60995585 + MIR3 SINE MIR 9 107 -101 403 341 65 19 chr10 84594936 84595150 -60994138 + L2 LINE L2 3090 3313 0 2088 167 66 20 chr10 84595546 84595953 -60993335 - MSTB LTR MaLR 0 426 1 238 232 43 14 chr10 84596435 84596504 -60992784 - L2 LINE L2 -337 2976 2906 281 291 12 0 chr10 84596504 84596590 -60992698 + (TG)n Simple_repeat Simple_repeat 1 87 0 243 316 120 53 chr10 84596604 84596793 -60992495 - L2 LINE L2 -436 2878 2703 2515 81 3 0 chr10 84596793 84597101 -60992187 + AluSq SINE Alu 1 309 -4 243 316 120 53 chr10 84597101 84597361 -60991927 - L2 LINE L2 -611 2703 2399 1826 141 32 0 chr10 84598317 84598630 -60990658 + MLT1D LTR MaLR 180 502 -3 404 279 18 9 chr10 84598788 84598899 -60990389 + MIR SINE MIR 110 221 -41 2251 119 35 54 chr10 84599057 84599428 -60989860 - THE1B LTR MaLR 0 364 1 259 303 49 54 chr10 84600015 84600200 -60989088 - MIR3 SINE MIR -22 186 3 596 254 95 39 chr10 84600824 84601056 -60988232 - MIR SINE MIR -4 258 14 452 207 0 0 chr10 84601555 84601637 -60987651 - Tigger5 DNA MER2_type 0 2323 2242 1681 171 62 0 chr10 84601640 84601915 -60987373 + AluSx SINE Alu 1 292 -20 365 206 0 0 chr10 84601915 84601988 -60987300 + Tigger5 DNA MER2_type 2245 2317 -6 480 171 0 0 chr10 84601991 84602067 -60987221 - Tigger5 DNA MER2_type -2245 78 3 2215 132 0 0 chr10 84602248 84602552 -60986736 - AluSx SINE Alu -8 304 1 238 314 22 44 chr10 84602654 84602791 -60986497 - MLT1J LTR MaLR -52 459 326 426 198 12 0 chr10 84602891 84602972 -60986316 - MLT1J LTR MaLR -330 181 100 1369 232 37 3 chr10 84602976 84603303 -60985985 - MER58B DNA MER1_type -3 338 1 352 299 48 27 chr10 84604108 84604255 -60985033 + MIR SINE MIR 34 183 -79 200 244 122 0 chr10 84604293 84604375 -60984913 + MIR3 SINE MIR 101 192 -16 201 152 0 0 chr10 84604706 84604739 -60984549 + (CCCTAA)n Simple_repeat Simple_repeat 3 35 0 253 278 76 56 chr10 84605407 84605551 -60983737 - L2 LINE L2 0 3313 3167 323 368 143 17 chr10 84605739 84606158 -60983130 - L2 LINE L2 -479 2835 2364 422 316 58 34 chr10 84606493 84606685 -60982603 + L2 LINE L2 2922 3108 -205 804 100 0 0 chr10 84606685 84606805 -60982483 + (TTCC)n Simple_repeat Simple_repeat 4 123 0 422 316 58 34 chr10 84606805 84606826 -60982462 + L2 LINE L2 3108 3127 -186 1856 166 0 0 chr10 84606826 84607109 -60982179 - AluJo SINE Alu -19 293 11 422 316 58 34 chr10 84607109 84607220 -60982068 + L2 LINE L2 3127 3255 -58 358 340 0 9 chr10 84608674 84608780 -60980508 + MIR SINE MIR 41 145 -63 476 312 127 5 chr10 84608795 84608984 -60980304 - MER102a DNA MER1_type 0 330 119 562 229 184 0 chr10 84609098 84609316 -60979972 + LTR33A LTR ERVL 266 523 0 1661 178 10 30 chr10 84609599 84609897 -60979391 - AluJb SINE Alu -20 292 1 222 128 0 0 chr10 84610724 84610763 -60978525 + (CA)n Simple_repeat Simple_repeat 1 39 0 195 42 0 0 chr10 84610848 84610872 -60978416 + (CA)n Simple_repeat Simple_repeat 2 25 0 598 264 21 36 chr10 84611096 84611289 -60977999 + MIR SINE MIR 20 209 -53 267 283 189 19 chr10 84611367 84611473 -60977815 - L2 LINE L2 -224 3048 2925 234 312 0 0 chr10 84611783 84611876 -60977412 + (CA)n Simple_repeat Simple_repeat 1 93 0 275 274 82 0 chr10 84612132 84612205 -60977083 + MIR3 SINE MIR 113 191 -17 198 0 0 0 chr10 84614187 84614209 -60975079 + (TG)n Simple_repeat Simple_repeat 2 23 0 2151 123 0 0 chr10 84614209 84614494 -60974794 - AluSx SINE Alu -27 285 1 394 315 44 0 chr10 84615456 84615597 -60973691 - MIR SINE MIR -62 146 37 269 303 84 25 chr10 84615822 84615941 -60973347 + MIR SINE MIR 47 172 -90 221 130 14 58 chr10 84616268 84616337 -60972951 + CT-rich Low_complexity Low_complexity 4 69 0 672 294 37 5 chr10 84617586 84617773 -60971515 - L3 LINE CR1 -1 1576 1384 390 308 93 34 chr10 84617991 84618264 -60971024 + L2 LINE L2 2780 3064 -208 260 125 42 0 chr10 84618406 84618454 -60970834 - MLT1E2 LTR MaLR -49 577 528 331 82 0 20 chr10 84618455 84618504 -60970784 - MLT1D LTR MaLR -212 293 246 606 235 65 7 chr10 84618987 84619140 -60970148 + MIR SINE MIR 6 167 -95 229 250 26 0 chr10 84619887 84619963 -60969325 - MIR SINE MIR -131 131 54 530 306 69 9 chr10 84621430 84621646 -60967642 - MIR SINE MIR -2 260 32 288 297 101 24 chr10 84621750 84621959 -60967329 + L2 LINE L2 2584 2808 -506 257 224 56 105 chr10 84621989 84622132 -60967156 - MER112 DNA MER1_type -31 229 94 2391 98 6 16 chr10 84622426 84622742 -60966546 - AluSq SINE Alu 0 313 1 268 272 44 61 chr10 84622981 84623095 -60966193 + L2 LINE L2 3202 3313 0 227 289 13 101 chr10 84623712 84623861 -60965427 - MIR3 SINE MIR -62 146 11 180 111 0 0 chr10 84624581 84624608 -60964680 + (TC)n Simple_repeat Simple_repeat 2 28 0 2237 131 0 0 chr10 84624611 84624909 -60964379 - AluSx SINE Alu -14 298 1 21 0 0 0 chr10 84624963 84624984 -60964304 + AT_rich Low_complexity Low_complexity 1 21 0 831 287 22 4 chr10 84625160 84625390 -60963898 + MIR SINE MIR 6 239 -23 184 345 22 29 chr10 84625600 84625739 -60963549 - MIR SINE MIR -116 146 9 925 257 31 12 chr10 84626200 84626457 -60962831 + L2 LINE L2 2393 2654 -660 689 274 64 56 chr10 84626471 84627047 -60962241 - L1MDa LINE L1 -4253 2143 1563 1265 134 25 5 chr10 84627060 84627261 -60962027 + MER2 DNA MER2_type 7 211 -134 403 226 92 7 chr10 84627305 84627497 -60961791 - L1MDa LINE L1 -928 1648 1340 272 231 194 0 chr10 84627570 84627678 -60961610 - FLAM_A SINE Alu 0 133 5 2977 263 36 53 chr10 84627730 84627886 -60961402 - L1MDa LINE L1 -4982 1223 1066 1837 121 48 4 chr10 84627886 84628187 -60961101 - AluSx SINE Alu 0 313 1 2977 263 36 53 chr10 84628187 84629130 -60960158 - L1MDa LINE L1 -5139 1066 141 464 286 110 44 chr10 84629133 84629360 -60959928 + L2 LINE L2 2686 2927 -387 2240 83 4 7 chr10 84629585 84629863 -60959425 + AluSx SINE Alu 1 277 -35 326 303 84 13 chr10 84629903 84630058 -60959230 + L2 LINE L2 3120 3285 -28 256 302 9 47 chr10 84630137 84630243 -60959045 - MIR SINE MIR -87 175 74 206 193 18 0 chr10 84630387 84630444 -60958844 + CT-rich Low_complexity Low_complexity 2 59 0 613 143 10 0 chr10 84630445 84630543 -60958745 - LTR12 LTR ERV1 -1 713 615 245 313 10 0 chr10 84630545 84630644 -60958644 - LTR30 LTR ERV1 -79 643 544 1596 92 3 158 chr10 84630644 84630972 -60958316 - LTR12 LTR ERV1 -437 277 1 225 272 70 91 chr10 84631411 84631709 -60957579 + L1ME4a LINE L1 5748 6039 -82 23 33 0 0 chr10 84631765 84631795 -60957493 + AT_rich Low_complexity Low_complexity 1 30 0 499 292 35 40 chr10 84632130 84632332 -60956956 - MIR SINE MIR -25 237 37 759 200 119 5 chr10 84632691 84632876 -60956412 + MER58C DNA MER1_type 9 214 -1 22 56 0 0 chr10 84633578 84633614 -60955674 + GC_rich Low_complexity Low_complexity 1 36 0 180 179 0 0 chr10 84633729 84633768 -60955520 + C-rich Low_complexity Low_complexity 4 42 0 21 0 0 0 chr10 84633777 84633798 -60955490 + GC_rich Low_complexity Low_complexity 1 21 0 27 0 0 0 chr10 84633845 84633872 -60955416 + GC_rich Low_complexity Low_complexity 1 27 0 478 206 36 73 chr10 84634385 84634550 -60954738 + MER102a DNA MER1_type 67 225 -105 653 306 19 14 chr10 84635437 84635646 -60953642 + MIR SINE MIR 46 255 -7 402 257 250 0 chr10 84636386 84636530 -60952758 - MER5A DNA MER1_type 0 189 10 259 296 74 28 chr10 84636542 84636650 -60952638 + L2 LINE L2 3151 3263 -9 192 77 0 0 chr10 84636653 84636679 -60952609 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 253 339 109 23 chr10 84637086 84637470 -60951818 - L2 LINE L2 -750 2564 2148 626 323 96 16 chr10 84637516 84637819 -60951469 + L1MC4a LINE L1 4339 4665 -1481 1979 208 72 13 chr10 84637835 84638292 -60950996 + LTR40a LTR ERVL 36 519 0 1111 284 91 43 chr10 84638457 84638691 -60950597 + L1MC4a LINE L1 4903 5124 -997 2562 66 0 0 chr10 84638691 84638993 -60950295 - AluY SINE Alu -9 302 1 1111 284 91 43 chr10 84638993 84639803 -60949485 + L1MC4a LINE L1 5124 5793 -328 425 316 80 46 chr10 84639918 84640291 -60948997 - L2 LINE L2 -1201 2113 1728 521 200 29 12 chr10 84640316 84640486 -60948802 + CT-rich Low_complexity Low_complexity 3 175 0 23 0 0 0 chr10 84640541 84640564 -60948724 + AT_rich Low_complexity Low_complexity 1 23 0 2270 81 27 10 chr10 84640570 84640865 -60948423 + AluSg SINE Alu 1 300 -10 1132 231 128 60 chr10 84640948 84641497 -60947791 - MLT1G LTR MaLR -3 587 1 2563 68 0 3 chr10 84641523 84641853 -60947435 + AluY SINE Alu 1 329 0 668 122 27 14 chr10 84642102 84642305 -60946983 + CT-rich Low_complexity Low_complexity 1 205 0 1272 56 11 6 chr10 84642310 84642489 -60946799 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 297 263 0 40 chr10 84643272 84643371 -60945917 - LTR67 LTR ERVL -4 553 459 423 263 124 0 chr10 84643476 84643613 -60945675 - MER103 DNA DNA -1 165 12 567 231 170 26 chr10 84643723 84643952 -60945336 + MIR SINE MIR 1 262 0 277 351 24 30 chr10 84644046 84644211 -60945077 - L2 LINE L2 -61 3211 3048 214 344 87 30 chr10 84644246 84644580 -60944708 - L2 LINE L2 -386 2928 2576 232 353 163 7 chr10 84644640 84644793 -60944495 - L2 LINE L2 -964 2350 2174 727 187 22 0 chr10 84646078 84646217 -60943071 - MLT1H LTR MaLR -15 534 393 243 243 14 29 chr10 84646305 84646375 -60942913 + LTR33A LTR ERVL 447 515 -8 212 328 84 17 chr10 84646471 84646590 -60942698 + MIR3 SINE MIR 30 156 -52 274 396 121 0 chr10 84647503 84647710 -60941578 + L3 LINE CR1 1326 1557 -20 211 315 136 12 chr10 84647765 84647820 -60941468 + L2 LINE L2 2727 2774 -540 2391 95 0 3 chr10 84647820 84648125 -60941163 + AluSg SINE Alu 1 304 -6 211 315 136 12 chr10 84648125 84648231 -60941057 + L2 LINE L2 2774 2908 -406 387 284 250 10 chr10 84648261 84648553 -60940735 - MLT1J2 LTR MaLR -22 428 67 938 311 47 57 chr10 84648594 84649033 -60940255 - LTR67 LTR ERVL 0 557 122 2388 89 11 55 chr10 84649033 84649414 -60939874 - THE1B LTR MaLR 0 364 1 938 311 47 57 chr10 84649414 84649444 -60939844 - LTR67 LTR ERVL -435 122 93 286 290 266 5 chr10 84649506 84649713 -60939575 + L2 LINE L2 2924 3184 -129 404 168 5 57 chr10 84649724 84649845 -60939443 + MIR SINE MIR 19 134 -74 196 168 35 195 chr10 84650636 84650749 -60938539 - MIR3 SINE MIR -20 188 94 264 176 0 0 chr10 84650820 84650871 -60938417 + L2 LINE L2 3222 3272 0 213 271 0 0 chr10 84651396 84651444 -60937844 + L2 LINE L2 3222 3269 -3 14875 175 32 56 chr10 84652418 84652455 -60936833 - L1MA4A LINE L1 -4 7001 6965 777 124 78 0 chr10 84652455 84652584 -60936704 + MER85 DNA T2_type 1 139 0 14875 175 32 56 chr10 84652584 84659658 -60929630 - L1MA4A LINE L1 -40 6965 73 342 161 65 0 chr10 84659725 84659787 -60929501 + MIR SINE MIR 50 115 -93 2137 150 0 0 chr10 84659950 84660256 -60929032 - AluSx SINE Alu -6 306 1 631 291 154 44 chr10 84660862 84661205 -60928083 - L1ME4a LINE L1 -6 6115 5735 252 286 55 74 chr10 84661509 84661820 -60927468 - L2 LINE L2 -466 2848 2544 203 311 85 33 chr10 84663452 84663722 -60925566 + L3 LINE CR1 1079 1362 -215 256 303 92 97 chr10 84663856 84664301 -60924987 - L2 LINE L2 -17 3255 2813 1898 201 24 10 chr10 84664589 84664998 -60924290 + MLT1C LTR MaLR 53 467 0 412 317 44 22 chr10 84665062 84665242 -60924046 - MIR3 SINE MIR -54 154 4 373 286 32 32 chr10 84665331 84665485 -60923803 + L1MC5 LINE L1 7754 7907 -54 514 322 41 25 chr10 84665546 84665788 -60923500 + MIR SINE MIR 16 261 -1 288 247 112 0 chr10 84665854 84665943 -60923345 - MIR SINE MIR -129 133 35 289 286 111 18 chr10 84666744 84666915 -60922373 - LTR33 LTR ERVL -8 513 327 241 286 13 0 chr10 84667352 84667429 -60921859 + L3 LINE CR1 1249 1326 -251 192 232 54 0 chr10 84667608 84667664 -60921624 - MIR SINE MIR -61 147 89 1330 238 129 8 chr10 84667680 84668045 -60921243 - MLT1I LTR MaLR 0 409 1 424 299 235 30 chr10 84668851 84669748 -60919540 + L2 LINE L2 1941 3082 -190 234 284 14 40 chr10 84669949 84670023 -60919265 - MIR3 SINE MIR -32 176 105 306 294 29 47 chr10 84670140 84670310 -60918978 - L1ME4a LINE L1 -13 6108 5942 395 244 73 63 chr10 84670455 84670660 -60918628 - L1ME4a LINE L1 -365 5756 5550 892 220 0 12 chr10 84670830 84670998 -60918290 + AluJo SINE Alu 122 287 -25 186 43 0 0 chr10 84670999 84671022 -60918266 + (CA)n Simple_repeat Simple_repeat 2 24 0 2111 132 7 0 chr10 84671030 84671317 -60917971 + AluSx SINE Alu 2 290 -22 261 83 0 0 chr10 84671317 84671353 -60917935 + (TA)n Simple_repeat Simple_repeat 2 37 0 700 55 0 0 chr10 84671374 84671465 -60917823 - L1PA5 LINE L1 0 6154 6064 327 170 45 152 chr10 84671540 84671652 -60917636 + MER102a DNA MER1_type 230 329 -1 260 254 79 40 chr10 84672312 84672438 -60916850 + MIR SINE MIR 100 230 -32 183 309 22 86 chr10 84673117 84673256 -60916032 - MIR3 SINE MIR -49 159 30 409 299 22 22 chr10 84674176 84674310 -60914978 + MIR3 SINE MIR 34 167 -41 7582 196 30 35 chr10 84674381 84674598 -60914690 - L1MB8 LINE L1 0 6178 5961 194 0 0 37 chr10 84674598 84674625 -60914663 + (TTTTC)n Simple_repeat Simple_repeat 5 30 0 1972 140 0 11 chr10 84674626 84674911 -60914377 - AluSx SINE Alu -30 282 1 7582 196 30 35 chr10 84674911 84675910 -60913378 - L1MB8 LINE L1 -217 5961 4959 1888 128 10 48 chr10 84675910 84676223 -60913065 - AluJb SINE Alu -11 301 1 7582 196 30 35 chr10 84676223 84677158 -60912130 - L1MB8 LINE L1 -1219 4959 4038 1225 208 100 30 chr10 84677158 84677281 -60912007 + AluJb SINE Alu 5 118 -194 387 0 0 0 chr10 84677281 84677324 -60911964 + (TAAA)n Simple_repeat Simple_repeat 1 43 0 1225 208 100 30 chr10 84677324 84677469 -60911819 + AluJb SINE Alu 118 292 -20 7582 196 30 35 chr10 84677469 84678061 -60911227 - L1MB8 LINE L1 -2140 4038 3445 194 336 14 71 chr10 84679842 84679898 -60909390 - L2 LINE L2 -2 3311 3253 1163 162 0 73 chr10 84679898 84680132 -60909156 + MER20 DNA MER1_type 3 219 0 194 336 14 71 chr10 84680132 84680215 -60909073 - L2 LINE L2 -60 3253 3180 289 297 0 0 chr10 84680402 84680476 -60908812 + (CA)n Simple_repeat Simple_repeat 1 74 0 297 284 105 63 chr10 84680543 84680733 -60908555 - L2 LINE L2 -190 3082 2885 396 301 9 23 chr10 84681206 84681345 -60907943 + MIR SINE MIR 12 149 -59 244 357 52 19 chr10 84681547 84681757 -60907531 + L2 LINE L2 2897 3113 -159 242 56 28 0 chr10 84682712 84682748 -60906540 + (TGGA)n Simple_repeat Simple_repeat 2 38 0 227 151 0 19 chr10 84682836 84682889 -60906399 - LTR66 LTR ERVL -161 449 398 573 297 47 5 chr10 84683344 84683536 -60905752 - MIR SINE MIR 0 262 63 270 167 0 0 chr10 84684068 84684110 -60905178 + MIR SINE MIR 109 150 -58 349 316 51 0 chr10 84684994 84685111 -60904177 + L2 LINE L2 3150 3272 0 200 160 20 60 chr10 84685111 84685161 -60904127 + (TGAA)n Simple_repeat Simple_repeat 2 49 0 225 248 184 56 chr10 84685211 84685336 -60903952 + L3 LINE CR1 1124 1264 -313 1122 182 123 79 chr10 84685492 84685606 -60903682 - MLT1C LTR MaLR 0 467 360 2280 111 3 7 chr10 84685606 84685912 -60903376 + AluSq SINE Alu 1 305 -8 1122 182 123 79 chr10 84685912 84686194 -60903094 - MLT1C LTR MaLR -107 360 53 934 221 119 33 chr10 84686194 84686529 -60902759 + MLT1A1 LTR MaLR 2 365 0 318 253 105 0 chr10 84689741 84689836 -60899452 + L2 LINE L2 3189 3293 -20 479 252 0 0 chr10 84690655 84690758 -60898530 + MIR SINE MIR 39 141 -67 190 147 0 0 chr10 84690851 84690885 -60898403 - L2 LINE L2 -222 3050 3017 857 235 16 0 chr10 84691634 84691817 -60897471 - MER5A DNA MER1_type 0 189 4 453 261 62 25 chr10 84691827 84691988 -60897300 - MER5B DNA MER1_type -3 175 9 182 265 20 0 chr10 84693460 84693509 -60895779 - L2 LINE L2 -17 3296 3247 299 281 171 46 chr10 84693666 84693929 -60895359 - L2 LINE L2 -173 3099 2804 518 319 32 11 chr10 84694626 84694814 -60894474 - MIR SINE MIR -47 215 24 443 333 18 12 chr10 84694866 84695034 -60894254 + MIR SINE MIR 61 229 -33 323 233 68 29 chr10 84696884 84696987 -60892301 + MIR3 SINE MIR 49 155 -53 180 152 0 0 chr10 84698121 84698154 -60891134 + GA-rich Low_complexity Low_complexity 1 33 0 225 241 35 0 chr10 84698933 84698991 -60890297 - MIR3 SINE MIR -134 74 15 344 269 57 21 chr10 84699125 84699266 -60890022 + MIR3 SINE MIR 33 178 -30 222 37 0 0 chr10 84701021 84701048 -60888240 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 572 313 115 14 chr10 84701048 84701326 -60887962 - L2 LINE L2 -13 3300 2995 308 284 54 47 chr10 84702379 84702527 -60886761 + MIR SINE MIR 34 182 -80 251 385 25 0 chr10 84703203 84703325 -60885963 - L2 LINE L2 -215 3057 2933 409 315 0 27 chr10 84703547 84703696 -60885592 + LTR16B LTR ERVL 320 464 0 1732 132 6 100 chr10 84704272 84704613 -60884675 - AluJo SINE Alu -3 309 1 257 214 0 0 chr10 84707502 84707558 -60881730 + MIR SINE MIR 177 232 -30 404 335 102 29 chr10 84708529 84708945 -60880343 + L2 LINE L2 2569 3010 -262 1769 249 59 16 chr10 84708989 84709479 -60879809 + MLT1J LTR MaLR 1 511 0 432 234 91 145 chr10 84709581 84709843 -60879445 - MLT1L LTR MaLR -191 424 90 499 227 174 17 chr10 84709986 84710158 -60879130 + MIR SINE MIR 18 216 -46 288 242 0 0 chr10 84710163 84710229 -60879059 - MER5B DNA MER1_type -5 173 108 433 270 17 0 chr10 84710376 84710491 -60878797 - MER5B DNA MER1_type -47 131 15 365 273 5 7 chr10 84710504 84710626 -60878662 + L2 LINE L2 3187 3272 0 208 273 0 0 chr10 84712136 84712191 -60877097 - MIR SINE MIR -150 112 58 286 333 86 50 chr10 84712371 84712593 -60876695 + MER102b DNA MER1_type 104 333 -8 232 310 126 0 chr10 84712601 84712688 -60876600 - MIR SINE MIR -73 135 38 231 250 33 54 chr10 84712997 84713089 -60876199 + MLT1K LTR MaLR 146 235 -353 1003 164 97 0 chr10 84713824 84714019 -60875269 - MER58A DNA MER1_type -10 214 1 596 233 241 19 chr10 84714090 84714356 -60874932 - MER21B LTR ERV1 -123 808 449 376 153 0 0 chr10 84714353 84714412 -60874876 + MER58A DNA MER1_type 163 221 -3 * 885 202 116 131 chr10 84714555 84714961 -60874327 - MER21B LTR ERV1 -463 400 1 757 258 21 0 chr10 84714963 84715149 -60874139 + MER117 DNA MER1_type 7 196 -1 308 302 135 16 chr10 84716162 84716288 -60873000 - MIR SINE MIR -89 173 33 596 258 47 110 chr10 84716593 84717066 -60872222 + MLT1K LTR MaLR 146 588 0 206 344 0 0 chr10 84717446 84717507 -60871781 + L2 LINE L2 3232 3292 -21 222 105 0 0 chr10 84717520 84717558 -60871730 + (TGAA)n Simple_repeat Simple_repeat 1 38 0 233 65 0 0 chr10 84717910 84717941 -60871347 + L2 LINE L2 3239 3269 -3 381 250 39 70 chr10 84718252 84718380 -60870908 - MLT1L LTR MaLR -99 516 289 582 299 24 0 chr10 84719003 84719167 -60870121 + MLT2E LTR ERVL 32 199 -429 666 280 70 36 chr10 84719497 84719744 -60869544 + MIR SINE MIR 5 262 0 387 275 108 8 chr10 84719753 84719873 -60869415 - MIR SINE MIR -26 236 105 386 189 0 0 chr10 84719873 84719947 -60869341 - MER116 DNA Mariner 0 80 7 210 132 0 0 chr10 84720182 84720220 -60869068 + L2 LINE L2 3022 3059 -213 204 376 0 0 chr10 84720224 84720309 -60868979 - L2 LINE L2 -316 2956 2872 188 220 20 20 chr10 84721006 84721056 -60868232 + MIR SINE MIR 121 170 -92 1493 205 45 17 chr10 84721084 84721700 -60867588 + MER63C DNA MER1_type 255 930 0 211 323 21 31 chr10 84721703 84721799 -60867489 + MIR SINE MIR 168 262 0 210 225 202 22 chr10 84721860 84721949 -60867339 + L2 LINE L2 3180 3284 -29 1094 209 72 51 chr10 84722285 84722616 -60866672 - MER2 DNA MER2_type -7 338 1 326 297 55 8 chr10 84722789 84722917 -60866371 - L2 LINE L2 -1 3312 3179 543 286 116 33 chr10 84723317 84723653 -60865635 - LTR16C LTR ERVL -17 474 111 225 393 18 12 chr10 84723891 84724054 -60865234 - L2 LINE L2 -1438 1876 1713 375 132 0 0 chr10 84724146 84724214 -60865074 + (TG)n Simple_repeat Simple_repeat 1 68 0 273 307 125 17 chr10 84724268 84724444 -60864844 + MIR SINE MIR 25 219 -43 291 224 0 60 chr10 84724479 84724546 -60864742 + MIR SINE MIR 6 68 -194 236 311 41 33 chr10 84724802 84724924 -60864364 - MER117 DNA MER1_type -53 144 22 239 211 19 0 chr10 84724965 84725017 -60864271 + Zaphod DNA AcHobo 11 63 -3968 4462 189 25 12 chr10 84725208 84725743 -60863545 - L1MB7 LINE L1 0 6184 5657 515 125 0 0 chr10 84725743 84725823 -60863465 + MADE1 DNA Mariner 1 80 0 4462 189 25 12 chr10 84725823 84727096 -60862192 - L1MB7 LINE L1 -527 5657 4348 657 320 114 21 chr10 84727283 84727797 -60861491 - L2 LINE L2 -18 3295 2737 412 351 0 8 chr10 84728069 84728200 -60861088 + MIR3 SINE MIR 25 154 -54 368 335 64 12 chr10 84728586 84728759 -60860529 - MIR3 SINE MIR -23 185 4 268 291 100 66 chr10 84729526 84729767 -60859521 + MLT1K LTR MaLR 227 475 -113 21 0 0 0 chr10 84730104 84730125 -60859163 + AT_rich Low_complexity Low_complexity 1 21 0 659 161 0 103 chr10 84731207 84731264 -60858024 - MER47A DNA MER2_type -2183 140 79 2304 119 0 3 chr10 84731264 84731575 -60857713 - AluSx SINE Alu -2 310 1 659 161 0 103 chr10 84731575 84731672 -60857616 - MER47A DNA MER2_type -2244 79 2 235 67 67 0 chr10 84731676 84731721 -60857567 + (CATATA)n Simple_repeat Simple_repeat 1 48 0 274 265 12 12 chr10 84731747 84731830 -60857458 + L1ME3A LINE L1 6040 6122 -48 262 258 142 42 chr10 84731852 84731972 -60857316 + MIR SINE MIR 6 137 -71 1021 189 148 30 chr10 84732769 84733039 -60856249 + AluJo SINE Alu 1 302 0 471 316 77 19 chr10 84733259 84733367 -60855921 + MIR SINE MIR 14 114 -148 1648 96 5 5 chr10 84733367 84733587 -60855701 + AluSq SINE Alu 83 302 -11 471 316 77 19 chr10 84733587 84733687 -60855601 + MIR SINE MIR 114 234 -28 200 200 22 0 chr10 84734241 84734286 -60855002 + L2 LINE L2 3268 3313 0 912 231 96 73 chr10 84734557 84735084 -60854204 + MLT1F LTR MaLR 14 565 -30 449 261 115 6 chr10 84735501 84735658 -60853630 - MIR SINE MIR -43 219 46 220 294 12 12 chr10 84736238 84736323 -60852965 + L3 LINE CR1 1075 1159 -418 231 333 76 15 chr10 84736504 84736636 -60852652 + L3 LINE CR1 1411 1550 -27 246 316 18 35 chr10 84736863 84736977 -60852311 - L2 LINE L2 0 3313 3202 187 268 67 62 chr10 84737066 84737275 -60852013 - L2 LINE L2 -703 2611 2402 326 255 44 56 chr10 84738701 84738848 -60850440 - MIR3 SINE MIR -82 126 14 227 279 114 0 chr10 84738951 84739030 -60850258 + MIR SINE MIR 43 130 -78 297 275 80 7 chr10 84739850 84739988 -60849300 - MIR SINE MIR -87 175 28 193 331 53 45 chr10 84741272 84741405 -60847883 - MIR SINE MIR -2 260 127 709 271 28 6 chr10 84741769 84741950 -60847338 + MIR SINE MIR 77 261 -1 399 207 72 62 chr10 84742622 84742815 -60846473 + L1ME4a LINE L1 5927 6121 0 380 275 28 9 chr10 84743078 84743187 -60846101 - MIR SINE MIR -59 149 39 232 273 73 45 chr10 84743280 84743390 -60845898 - MIR SINE MIR -123 139 27 1758 235 29 55 chr10 84743991 84744354 -60844934 + L1MEc LINE L1 34 378 -6018 216 67 0 0 chr10 84744354 84744384 -60844904 + (CA)n Simple_repeat Simple_repeat 2 31 0 1758 235 29 55 chr10 84744384 84744598 -60844690 + L1MEc LINE L1 378 596 -5800 317 295 70 25 chr10 84744745 84744945 -60844343 - L1MC5 LINE L1 -479 7482 7274 582 237 0 0 chr10 84745274 84745388 -60843900 + MER81 DNA DNA 1 114 0 798 282 95 14 chr10 84746909 84747256 -60842032 + MLT1J1 LTR MaLR 72 446 0 234 301 23 8 chr10 84747506 84747631 -60841657 + MIR SINE MIR 28 144 -64 200 230 40 27 chr10 84747956 84748030 -60841258 + L2 LINE L2 3173 3247 -25 2387 75 10 0 chr10 84749062 84749354 -60839934 - AluSp SINE Alu -18 295 1 315 0 0 0 chr10 84749531 84749566 -60839722 + (CA)n Simple_repeat Simple_repeat 1 35 0 186 262 0 0 chr10 84749844 84749886 -60839402 + MIR SINE MIR 105 146 -62 259 186 0 0 chr10 84750143 84750186 -60839102 - MIR SINE MIR -117 145 103 219 69 0 0 chr10 84750528 84750557 -60838731 + (CA)n Simple_repeat Simple_repeat 1 29 0 226 180 80 0 chr10 84750776 84750826 -60838462 - L2 LINE L2 -75 3238 3185 323 275 104 21 chr10 84750986 84751287 -60838001 - L2 LINE L2 -262 3010 2682 268 283 51 79 chr10 84752247 84752424 -60836864 + MIR3 SINE MIR 33 204 -4 385 184 31 51 chr10 84752537 84752635 -60836653 - MIR SINE MIR -50 212 117 1482 80 0 0 chr10 84753052 84753228 -60836060 + AluY SINE Alu 1 176 -135 488 105 0 0 chr10 84753228 84753304 -60835984 + AluY SINE Alu 232 307 -2 2168 94 0 0 chr10 84754147 84754423 -60834865 - AluSg SINE Alu -8 302 27 241 235 0 0 chr10 84754423 84754474 -60834814 + LTR30 LTR ERV1 2 52 -670 1241 77 77 73 chr10 84754474 84754694 -60834594 + LTR12 LTR ERV1 53 273 -441 260 275 11 0 chr10 84754715 84754806 -60834482 + LTR30 LTR ERV1 552 643 -79 687 140 0 0 chr10 84754808 84754908 -60834380 + LTR12 LTR ERV1 615 714 0 538 251 153 21 chr10 84754910 84755145 -60834143 + MLT1K LTR MaLR 319 584 -4 2750 255 75 27 chr10 84756424 84757590 -60831698 - L1MEc LINE L1 -2188 4027 2806 643 243 86 0 chr10 84757654 84757806 -60831482 + MER63A DNA MER1_type 46 210 0 532 196 155 0 chr10 84757807 84757955 -60831333 - L1MEc LINE L1 -3415 2800 2630 1504 250 89 31 chr10 84757956 84758665 -60830623 - L1MEc LINE L1 -4390 2006 1257 253 259 12 35 chr10 84758699 84758784 -60830504 + MER21B LTR ERV1 1 83 -780 2626 234 46 42 chr10 84758921 84759682 -60829606 + MER21B LTR ERV1 98 861 -2 997 296 66 73 chr10 84759689 84760843 -60828445 - L1MEc LINE L1 -5162 1234 88 1217 199 183 43 chr10 84760843 84761286 -60828002 + MLT1D LTR MaLR 1 505 0 997 296 66 73 chr10 84761286 84761346 -60827942 - L1MEc LINE L1 -6308 88 29 389 267 117 0 chr10 84761365 84761485 -60827803 - MER5B DNA MER1_type -44 134 1 217 283 0 0 chr10 84761485 84761538 -60827750 - MIR3 SINE MIR -48 160 108 232 238 0 32 chr10 84762130 84762193 -60827095 + CT-rich Low_complexity Low_complexity 4 64 0 543 302 7 7 chr10 84762585 84762734 -60826554 - MIR SINE MIR -75 187 39 427 219 23 8 chr10 84762959 84763061 -60826227 + MIR SINE MIR 112 214 -48 3522 206 59 20 chr10 84763169 84764098 -60825190 - L1MC4a LINE L1 0 7808 6844 328 241 0 13 chr10 84764313 84764392 -60824896 - MIR SINE MIR -63 145 68 185 326 0 0 chr10 84764875 84764924 -60824364 + L3 LINE CR1 987 1035 -542 242 253 22 77 chr10 84765143 84765234 -60824054 - MIR SINE MIR -69 193 108 597 195 81 29 chr10 84766066 84766240 -60823048 + MER53 DNA DNA 6 188 -1 240 349 47 8 chr10 84766628 84766757 -60822531 - MIR3 SINE MIR -54 154 21 187 322 46 62 chr10 84768254 84768558 -60820730 - L3 LINE CR1 -178 1399 1101 262 239 37 85 chr10 84768695 84768846 -60820442 - MIR SINE MIR -58 150 20 279 0 0 0 chr10 84769361 84769392 -60819896 + (CA)n Simple_repeat Simple_repeat 2 32 0 339 260 40 10 chr10 84769608 84769708 -60819580 + MIR SINE MIR 48 150 -112 267 279 29 50 chr10 84769938 84770078 -60819210 - MIR3 SINE MIR -49 159 23 285 298 58 8 chr10 84770244 84770365 -60818923 + MIR SINE MIR 60 186 -76 215 299 54 68 chr10 84770366 84770513 -60818775 - L2 LINE L2 -2 3311 3167 2210 131 103 28 chr10 84771170 84771236 -60818052 - MSTA LTR MaLR -2 426 366 2047 107 16 66 chr10 84771236 84771555 -60817733 - AluSx SINE Alu -9 303 1 2210 131 103 28 chr10 84771555 84771884 -60817404 - MSTA LTR MaLR -62 366 1 764 193 46 61 chr10 84772035 84772232 -60817056 - MER119 DNA MER1_type -1 582 389 24 32 0 0 chr10 84772239 84772270 -60817018 + AT_rich Low_complexity Low_complexity 1 31 0 997 152 40 0 chr10 84772319 84772517 -60816771 - L1MA8 LINE L1 -21 6270 6065 1377 220 51 46 chr10 84772517 84772766 -60816522 - MER119 DNA MER1_type -201 382 129 2103 131 7 7 chr10 84772766 84773071 -60816217 + AluSc SINE Alu 1 305 -4 1377 220 51 46 chr10 84773071 84773194 -60816094 - MER119 DNA MER1_type -454 129 8 286 323 10 10 chr10 84773223 84773319 -60815969 + MLT1L LTR MaLR 192 287 -328 279 278 114 28 chr10 84773431 84773607 -60815681 + MLT1L LTR MaLR 425 615 0 2282 110 0 3 chr10 84773800 84774100 -60815188 - AluSg SINE Alu -11 299 1 967 215 57 23 chr10 84775728 84775993 -60813295 - ORSL DNA AcHobo 0 275 2 1695 185 107 0 chr10 84776023 84776202 -60813086 - MLT1B LTR MaLR -7 383 225 2044 137 7 0 chr10 84776202 84776494 -60812794 - AluSq SINE Alu -19 294 1 1695 185 107 0 chr10 84776494 84776660 -60812628 - MLT1B LTR MaLR -165 225 1 233 143 0 20 chr10 84777414 84777463 -60811825 + (GGA)n Simple_repeat Simple_repeat 2 49 0 368 299 73 0 chr10 84777832 84777969 -60811319 + MIR3 SINE MIR 20 166 -42 358 210 43 56 chr10 84778124 84778286 -60811002 - L1ME4a LINE L1 -1 6120 5961 413 294 0 0 chr10 84778347 84778449 -60810839 - MIR SINE MIR -77 185 84 324 0 0 0 chr10 84778805 84778841 -60810447 + (TG)n Simple_repeat Simple_repeat 2 37 0 948 290 39 44 chr10 84779796 84780254 -60809034 - LTR16B LTR ERVL -1 463 8 674 252 35 83 chr10 84780260 84780574 -60808714 - MLT1I LTR MaLR -110 299 1 400 285 19 6 chr10 84780589 84780747 -60808541 + (TGAA)n Simple_repeat Simple_repeat 3 162 0 303 173 29 35 chr10 84781353 84781437 -60807851 + MIR SINE MIR 87 151 -57 593 250 0 0 chr10 84781826 84781962 -60807326 - L1ME3A LINE L1 -5 6165 6030 370 200 70 0 chr10 84781976 84782076 -60807212 - L1ME3A LINE L1 -272 5898 5792 236 277 75 11 chr10 84782718 84782812 -60806476 + L2 LINE L2 3153 3252 -20 283 290 105 31 chr10 84783191 84783353 -60805935 + MIR3 SINE MIR 20 193 -15 180 198 49 99 chr10 84783662 84783743 -60805545 - MIR SINE MIR -8 254 178 325 299 71 7 chr10 84785790 84785944 -60803344 + MER103 DNA DNA 3 166 0 851 236 108 71 chr10 84787534 84787682 -60801606 + MLT1C LTR MaLR 15 156 -311 2303 116 0 0 chr10 84787682 84787992 -60801296 + AluSg SINE Alu 1 310 0 851 236 108 71 chr10 84787992 84788280 -60801008 + MLT1C LTR MaLR 156 467 0 294 275 55 46 chr10 84789196 84789305 -60799983 + MIR SINE MIR 21 130 -132 25 0 0 0 chr10 84790269 84790294 -60798994 + AT_rich Low_complexity Low_complexity 1 25 0 230 336 52 43 chr10 84790787 84790903 -60798385 + MIR SINE MIR 17 133 -75 182 264 221 29 chr10 84790930 84791070 -60798218 - MIR SINE MIR -65 197 31 267 247 26 0 chr10 84791466 84791543 -60797745 + L1MC4 LINE L1 6614 6692 -1350 417 210 49 21 chr10 84793665 84793808 -60795480 - LTR16A LTR ERVL 0 450 304 703 310 47 18 chr10 84793895 84794508 -60794780 + L2 LINE L2 2395 3102 -211 1437 265 59 59 chr10 84794533 84794650 -60794638 - L2 LINE L2 -1021 2293 2177 1491 181 28 16 chr10 84794650 84794970 -60794318 + MER33 DNA MER1_type 1 324 0 1437 265 59 59 chr10 84794970 84795482 -60793806 - L2 LINE L2 -1136 2178 1664 1146 199 37 12 chr10 84795467 84795708 -60793580 - MIR SINE MIR -10 252 6 * 414 311 30 18 chr10 84795710 84795874 -60793414 - L2 LINE L2 -1636 1678 1513 231 297 0 0 chr10 84797587 84797651 -60791637 - L2 LINE L2 -217 3055 2992 2623 66 0 0 chr10 84797653 84797958 -60791330 + AluY SINE Alu 2 306 -5 380 339 0 19 chr10 84797974 84798122 -60791166 - MIR SINE MIR -63 145 16 291 180 0 0 chr10 84798328 84798378 -60790910 - MER91 DNA MER1_type -89 51 2 1499 253 68 52 chr10 84798510 84799084 -60790204 - MLT1K LTR MaLR -2 586 4 6901 64 18 43 chr10 84799230 84801069 -60788219 - SVA Other Other -589 1386 1 21 0 0 0 chr10 84801336 84801357 -60787931 + GC_rich Low_complexity Low_complexity 1 21 0 2022 118 37 3 chr10 84802302 84802598 -60786690 - AluSx SINE Alu -6 306 1 1747 140 125 0 chr10 84802598 84802927 -60786361 - MSTA LTR MaLR -58 370 1 558 199 71 14 chr10 84803078 84803219 -60786069 - MER119 DNA MER1_type -1 582 434 180 0 0 0 chr10 84803651 84803671 -60785617 + (CAA)n Simple_repeat Simple_repeat 2 21 0 404 214 7 69 chr10 84803781 84803926 -60785362 + FLAM_C SINE Alu 1 136 -7 4611 174 23 16 chr10 84804641 84805073 -60784215 + L1MB8 LINE L1 5208 5636 -542 543 125 0 0 chr10 84805073 84805153 -60784135 - MADE1 DNA Mariner 0 80 1 4611 174 23 16 chr10 84805153 84805679 -60783609 + L1MB8 LINE L1 5636 6173 -5 2030 245 58 25 chr10 84808985 84809589 -60779699 + L1ME3A LINE L1 5546 6169 -1 33 0 0 0 chr10 84810094 84810127 -60779161 + AT_rich Low_complexity Low_complexity 1 33 0 280 307 69 20 chr10 84811808 84811909 -60777379 + L2 LINE L2 3147 3252 -20 238 261 0 23 chr10 84812127 84812257 -60777031 + C-rich Low_complexity Low_complexity 3 129 0 315 300 0 0 chr10 84812269 84812369 -60776919 + C-rich Low_complexity Low_complexity 1 100 0 871 151 47 23 chr10 84812528 84812700 -60776588 - MER2 DNA MER2_type -169 176 1 353 297 55 8 chr10 84812873 84813001 -60776287 - L2 LINE L2 -1 3312 3179 517 310 108 30 chr10 84813401 84813736 -60775552 - LTR16C LTR ERVL -17 474 114 262 289 72 12 chr10 84814457 84814540 -60774748 - L2 LINE L2 -1 3271 3184 306 352 30 15 chr10 84814727 84814926 -60774362 - L2 LINE L2 -646 2668 2467 1472 184 28 16 chr10 84815357 84815677 -60773611 + MER33 DNA MER1_type 1 324 0 1124 253 43 69 chr10 84815683 84816192 -60773096 - L2 LINE L2 -1155 2159 1664 452 307 30 12 chr10 84816177 84816343 -60772945 - MIR SINE MIR -10 252 84 * 214 359 39 8 chr10 84817736 84817864 -60771424 + MIR3 SINE MIR 23 154 -54 2053 190 36 23 chr10 84818303 84818781 -60770507 - L1MC4a LINE L1 -480 7328 6845 290 220 0 80 chr10 84818997 84819097 -60770191 - MIR SINE MIR -63 145 54 189 74 0 0 chr10 84819745 84819772 -60769516 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 347 225 72 87 chr10 84821263 84821401 -60767887 - MLT1J2 LTR MaLR -48 402 267 252 328 59 19 chr10 84821684 84821799 -60767489 - MIR SINE MIR -67 141 37 566 295 47 5 chr10 84823182 84823372 -60765916 - MIR SINE MIR -2 260 63 858 292 42 14 chr10 84824411 84824699 -60764589 + LTR16B LTR ERVL 168 463 -1 499 30 0 100 chr10 84825484 84825584 -60763704 - SVA Other Other -1296 90 1 207 0 0 0 chr10 84825587 84825610 -60763678 + (GGGAGA)n Simple_repeat Simple_repeat 6 28 0 402 269 115 0 chr10 84825807 84825937 -60763351 - MER103 DNA DNA -2 164 20 247 125 0 125 chr10 84826275 84826339 -60762949 - MIR SINE MIR -100 162 107 377 314 7 15 chr10 84826398 84826535 -60762753 + MIR SINE MIR 21 156 -106 251 253 115 58 chr10 84826901 84827075 -60762213 + MIR3 SINE MIR 24 207 -1 226 293 113 60 chr10 84827175 84827475 -60761813 - L2 LINE L2 -52 3220 2905 395 351 90 24 chr10 84827619 84827830 -60761458 + MIR SINE MIR 28 252 -10 216 158 0 0 chr10 84827971 84828009 -60761279 + CT-rich Low_complexity Low_complexity 3 40 0 219 185 0 19 chr10 84828818 84828872 -60760416 + (TAA)n Simple_repeat Simple_repeat 3 55 0 2030 245 58 25 chr10 84829347 84829951 -60759337 - L1ME3A LINE L1 -1 6169 5546 1925 121 34 7 chr10 84830217 84830515 -60758773 + AluSx SINE Alu 1 306 -6 442 322 40 11 chr10 84831107 84831284 -60758004 + L3 LINE CR1 1312 1493 -84 279 284 182 13 chr10 84833229 84833576 -60755712 + L2 LINE L2 2607 3013 -300 433 347 36 18 chr10 84833757 84833976 -60755312 + MIR SINE MIR 27 249 -13 248 216 159 11 chr10 84834009 84834097 -60755191 + MIR SINE MIR 16 116 -92 990 219 5 0 chr10 84834582 84834778 -60754510 - MER3 DNA MER1_type -12 197 1 485 296 157 6 chr10 84835030 84835189 -60754099 + MER5A DNA MER1_type 4 186 -3 361 293 95 0 chr10 84835379 84835495 -60753793 - MIR3 SINE MIR -17 191 65 950 287 8 24 chr10 84835667 84835921 -60753367 - MIR SINE MIR -12 250 1 231 224 0 0 chr10 84836774 84836823 -60752465 - L2 LINE L2 0 3313 3265 * 554 275 64 51 chr10 84836813 84837108 -60752180 - L2 LINE L2 -462 2852 2554 589 217 14 101 chr10 84837118 84837325 -60751963 - L2 LINE L2 -1006 2308 2120 477 225 63 0 chr10 84837319 84837430 -60751858 + L2 LINE L2 1841 1958 -1356 * 4895 212 39 70 chr10 84837710 84839293 -60749995 - L1M4 LINE L1 -1769 4377 2844 497 242 43 84 chr10 84839462 84839811 -60749477 - MLT1I LTR MaLR -13 396 79 2256 63 3 3 chr10 84840393 84840680 -60748608 - AluY SINE Alu -24 287 1 206 216 0 0 chr10 84840775 84840812 -60748476 + polypyrimidine Low_complexity Low_complexity 2 38 0 2018 180 32 24 chr10 84840847 84841059 -60748229 - Tigger2a DNA MER2_type -2293 415 197 1920 133 0 31 chr10 84841059 84841376 -60747912 + AluSx SINE Alu 1 307 -5 2018 180 32 24 chr10 84841376 84841575 -60747713 - Tigger2a DNA MER2_type -2511 197 1 636 281 76 61 chr10 84841780 84842663 -60746625 + L1MD3 LINE L1 4308 5203 -943 510 313 204 34 chr10 84842715 84843280 -60746008 + L1MD3 LINE L1 5293 5953 -1855 452 303 153 11 chr10 84843726 84844099 -60745189 - L1MC/D LINE L1 -2024 6282 5857 312 164 33 0 chr10 84844232 84844293 -60744995 + MADE1 DNA Mariner 18 80 0 454 317 99 48 chr10 84844308 84844724 -60744564 - L1MC/D LINE L1 -1096 5548 5112 757 245 89 31 chr10 84844862 84845119 -60744169 + L1MD3 LINE L1 6491 6762 -1233 2305 179 38 42 chr10 84845142 84845640 -60743648 - MLT1D LTR MaLR -7 498 3 701 192 293 0 chr10 84845642 84845871 -60743417 + L1MC4 LINE L1 6794 7089 -953 2490 216 66 31 chr10 84845875 84846513 -60742775 + MER21B LTR ERV1 137 796 -67 702 268 18 31 chr10 84846684 84846912 -60742376 + L1ME3A LINE L1 5939 6163 -7 6145 233 69 59 chr10 84846934 84850743 -60738545 + L1MD1 LINE L1 21 3791 -2749 1916 112 0 28 chr10 84850743 84851097 -60738191 + AluSx SINE Alu 6 351 0 6145 233 69 59 chr10 84851097 84851318 -60737970 + L1MD1 LINE L1 3791 4008 -2532 2000 129 0 3 chr10 84851318 84851612 -60737676 + AluSx SINE Alu 6 298 -14 6145 233 69 59 chr10 84851612 84852426 -60736862 + L1MD1 LINE L1 4008 4917 -1623 4509 160 57 18 chr10 84852454 84853334 -60735954 + L1MD1 LINE L1 5723 6636 0 399 281 169 43 chr10 84853491 84853722 -60735566 - L1MC/D LINE L1 -2723 3921 3662 265 313 107 5 chr10 84853751 84853975 -60735313 - L1MC/D LINE L1 -2935 3709 3463 515 149 21 64 chr10 84854296 84854437 -60734851 - L1MB7 LINE L1 -1 6183 6049 2081 191 65 25 chr10 84854437 84854867 -60734421 - L1M4 LINE L1 -1580 4566 4155 244 48 48 0 chr10 84854867 84854909 -60734379 + (TTTTA)n Simple_repeat Simple_repeat 1 44 0 1913 128 11 4 chr10 84854912 84855185 -60734103 - AluSx SINE Alu -37 275 1 2081 191 65 25 chr10 84855185 84855275 -60734013 - L1M4 LINE L1 -1992 4154 4021 33 0 0 0 chr10 84855348 84855381 -60733907 + AT_rich Low_complexity Low_complexity 1 33 0 732 317 39 37 chr10 84855389 84855677 -60733611 - L1ME3A LINE L1 -260 5906 5620 2377 136 27 11 chr10 84855677 84856045 -60733243 - THE1C LTR MaLR 0 375 2 732 317 39 37 chr10 84856045 84856058 -60733230 - L1ME3A LINE L1 -546 5620 5609 1830 104 0 0 chr10 84856058 84856288 -60733000 + AluSg SINE Alu 28 257 -53 732 317 39 37 chr10 84856288 84856553 -60732735 - L1ME3A LINE L1 -557 5609 5340 1569 48 87 0 chr10 84856825 84857033 -60732255 + L1PA4 LINE L1 5930 6155 0 26 30 0 0 chr10 84857516 84857549 -60731739 + AT_rich Low_complexity Low_complexity 1 33 0 311 294 17 38 chr10 84857610 84857828 -60731460 - L1MEd LINE L1 -4862 1724 1468 519 308 79 59 chr10 84858167 84858508 -60730780 - L1MEd LINE L1 -5722 912 565 1399 167 0 14 chr10 84859187 84859408 -60729880 + MER20 DNA MER1_type 1 218 -1 412 257 66 40 chr10 84859548 84859700 -60729588 - MIR SINE MIR -104 158 3 468 223 54 54 chr10 84860970 84861118 -60728170 + MIR3 SINE MIR 6 153 -55 431 240 19 29 chr10 84861122 84861226 -60728062 + L2 LINE L2 3210 3312 -1 292 313 49 28 chr10 84861241 84861385 -60727903 - L2 LINE L2 -556 2758 2612 259 341 24 0 chr10 84861548 84861630 -60727658 - MIR SINE MIR -67 141 58 2779 232 33 25 chr10 84861639 84862407 -60726881 + L1ME1 LINE L1 5378 6151 -15 497 276 150 55 chr10 84863293 84863659 -60725629 + L2 LINE L2 2872 3272 0 222 228 53 0 chr10 84864083 84864140 -60725148 + (TATATG)n Simple_repeat Simple_repeat 3 62 0 188 161 0 0 chr10 84864277 84864308 -60724980 + MIR SINE MIR 109 139 -69 280 266 21 21 chr10 84864562 84864656 -60724632 + MIR SINE MIR 60 153 -55 222 299 68 27 chr10 84865451 84865598 -60723690 + L2 LINE L2 3161 3313 0 1964 180 30 22 chr10 84865786 84866148 -60723140 - MLT1A1 LTR MaLR 0 365 1 401 298 12 18 chr10 84866221 84866389 -60722899 + GA-rich Low_complexity Low_complexity 2 168 0 225 268 29 29 chr10 84866976 84867053 -60722235 - MIR SINE MIR -85 123 46 198 359 26 17 chr10 84867841 84867958 -60721330 + L3 LINE CR1 690 807 -770 238 220 114 76 chr10 84868514 84868646 -60720642 + MLT1H LTR MaLR 170 306 -243 558 250 0 0 chr10 84868666 84868778 -60720510 + MER81 DNA DNA 3 114 0 490 261 33 72 chr10 84869056 84869236 -60720052 - MER5B DNA MER1_type 0 178 6 193 314 43 81 chr10 84869195 84869405 -60719883 + L3 LINE CR1 726 927 -650 * 249 57 0 0 chr10 84869595 84869630 -60719658 + (TTG)n Simple_repeat Simple_repeat 2 36 0 1376 188 87 18 chr10 84869632 84869908 -60719380 - AluJo SINE Alu -17 295 1 331 220 99 0 chr10 84869931 84870022 -60719266 - MER5A DNA MER1_type -86 103 4 355 307 230 4 chr10 84870033 84870303 -60718985 + L3 LINE CR1 1151 1481 -96 220 271 167 0 chr10 84870751 84870847 -60718441 + MIR3 SINE MIR 93 204 -4 356 239 58 72 chr10 84871386 84871524 -60717764 - MLT1J2 LTR MaLR -48 402 267 314 347 80 5 chr10 84871714 84871922 -60717366 - MIR SINE MIR -1 261 37 325 307 116 40 chr10 84874445 84874722 -60714566 - L2 LINE L2 -1 3312 3015 * 522 337 15 0 chr10 84874716 84874921 -60714367 - L2 LINE L2 -647 2667 2460 234 196 106 85 chr10 84875608 84875797 -60713491 - L1ME4a LINE L1 -1 6120 5928 459 291 14 0 chr10 84875985 84876133 -60713155 - L1ME4a LINE L1 -213 5908 5759 181 291 0 76 chr10 84876283 84876362 -60712926 + MIR SINE MIR 79 151 -57 192 244 167 13 chr10 84877054 84877132 -60712156 + MIR SINE MIR 36 125 -83 210 237 17 34 chr10 84877241 84877300 -60711988 - L2 LINE L2 -828 2486 2429 2386 72 7 3 chr10 84877512 84877803 -60711485 - AluY SINE Alu -19 292 1 196 229 60 48 chr10 84877919 84878002 -60711286 + MIR SINE MIR 56 139 -69 329 278 95 47 chr10 84878305 84878474 -60710814 - MIR SINE MIR -70 192 16 1135 66 11 22 chr10 84878723 84878905 -60710383 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2361 101 16 0 chr10 84878905 84879240 -60710048 - AluSq SINE Alu 0 340 1 563 311 111 57 chr10 84879250 84879762 -60709526 + L3 LINE CR1 462 1001 -576 523 274 61 69 chr10 84879763 84880170 -60709118 - L1M3 LINE L1 -476 5645 5266 192 370 34 0 chr10 84880608 84880727 -60708561 + MIR SINE MIR 33 155 -107 1107 180 15 0 chr10 84880994 84881194 -60708094 + MER58A DNA MER1_type 22 224 0 219 146 0 0 chr10 84881607 84881648 -60707640 + (TTCA)n Simple_repeat Simple_repeat 4 44 0 5590 211 49 26 chr10 84881684 84882642 -60706646 - Charlie1a DNA MER1_type -1306 1455 452 2104 123 0 33 chr10 84882642 84882944 -60706344 + AluSx SINE Alu 3 294 -18 5590 211 49 26 chr10 84882944 84883407 -60705881 - Charlie1a DNA MER1_type -2309 452 1 2022 163 36 6 chr10 84883540 84883897 -60705391 - L1MB3 LINE L1 -2 6181 5814 1856 156 7 10 chr10 84883923 84884224 -60705064 - AluJo SINE Alu -1 311 12 304 82 0 0 chr10 84884251 84884300 -60704988 + Alu SINE Alu 254 302 0 652 146 17 0 chr10 84884326 84884450 -60704838 + L1MB2 LINE L1 5813 5949 -222 377 148 104 0 chr10 84884447 84884533 -60704755 - L1MB3 LINE L1 -379 5795 5702 * 226 211 197 0 chr10 84885609 84885685 -60703603 - MIR SINE MIR -109 153 63 212 196 0 39 chr10 84885728 84885779 -60703509 + (TATG)n Simple_repeat Simple_repeat 2 50 0 189 0 0 0 chr10 84885848 84885869 -60703419 + (TG)n Simple_repeat Simple_repeat 2 22 0 334 342 82 13 chr10 84886073 84886231 -60703057 - MIR SINE MIR -73 189 21 321 341 62 0 chr10 84886474 84886603 -60702685 - MIR3 SINE MIR -48 160 24 844 204 41 20 chr10 84887412 84887491 -60701797 + MER20 DNA MER1_type 20 96 -123 2243 137 15 12 chr10 84887491 84887827 -60701461 - MER1B DNA MER1_type 0 337 1 844 204 41 20 chr10 84887827 84887943 -60701345 + MER20 DNA MER1_type 96 219 0 192 125 0 0 chr10 84888837 84888869 -60700419 + (GA)n Simple_repeat Simple_repeat 1 32 0 225 196 0 0 chr10 84890070 84890121 -60699167 + CT-rich Low_complexity Low_complexity 2 52 0 541 316 68 29 chr10 84890128 84890334 -60698954 - MIR SINE MIR -4 258 45 413 226 129 29 chr10 84890480 84890662 -60698626 + MIR SINE MIR 10 212 -50 199 311 52 82 chr10 84890682 84890817 -60698471 + L2 LINE L2 3117 3247 -25 736 291 16 19 chr10 84890866 84891173 -60698115 - L1ME LINE L1 -566 5598 5280 259 333 14 0 chr10 84891624 84891693 -60697595 + MIR SINE MIR 34 103 -105 361 220 80 30 chr10 84891760 84891860 -60697428 + L2 LINE L2 3208 3312 -1 200 318 0 0 chr10 84892851 84892914 -60696374 - MIR SINE MIR -64 144 82 324 350 55 25 chr10 84893370 84893570 -60695718 + L3 LINE CR1 1291 1496 -81 305 287 46 0 chr10 84893748 84893835 -60695453 - MER91A DNA MER1_type -101 95 5 603 343 19 23 chr10 84893835 84894051 -60695237 - MIR SINE MIR -28 234 20 229 339 77 59 chr10 84896230 84896451 -60692837 - L2 LINE L2 -176 3096 2872 472 277 84 6 chr10 84896489 84896655 -60692633 - MIR SINE MIR -14 248 70 1162 234 149 31 chr10 84896715 84897198 -60692090 - MLT1F LTR MaLR 0 542 3 191 319 0 59 chr10 84899536 84899655 -60689633 - MIR SINE MIR -77 131 20 332 291 50 35 chr10 84900405 84900546 -60688742 - MIR3 SINE MIR -41 167 25 1335 209 89 9 chr10 84900990 84901306 -60687982 - MLT1A1 LTR MaLR -24 341 1 21 0 0 0 chr10 84901718 84901739 -60687549 + AT_rich Low_complexity Low_complexity 1 21 0 240 346 19 19 chr10 84902341 84902445 -60686843 - MIR3 SINE MIR -6 202 99 567 228 186 0 chr10 84902970 84903115 -60686173 + MER5A DNA MER1_type 18 189 0 348 299 33 60 chr10 84903143 84903327 -60685961 + MIR3 SINE MIR 19 197 -11 661 329 43 92 chr10 84903830 84904320 -60684968 + L2 LINE L2 2805 3270 -2 641 194 0 22 chr10 84904357 84904537 -60684751 + GA-rich Low_complexity Low_complexity 1 176 0 251 250 45 62 chr10 84904985 84905097 -60684191 - MIR SINE MIR -147 115 6 520 317 21 20 chr10 84905500 84905708 -60683580 + MIR SINE MIR 3 214 -48 939 241 57 68 chr10 84905716 84906052 -60683236 + MER46C DNA MER2_type 7 338 0 261 233 103 78 chr10 84906212 84906328 -60682960 + MER5A DNA MER1_type 45 163 -26 477 259 132 33 chr10 84906375 84906587 -60682701 - MIR SINE MIR -2 260 28 197 237 17 34 chr10 84907280 84907339 -60681949 + MIR SINE MIR 54 111 -97 201 279 0 33 chr10 84907352 84907413 -60681875 - MIR3 SINE MIR -44 164 106 438 274 24 30 chr10 84909260 84909428 -60679860 - L1ME4a LINE L1 -8 6113 5947 469 293 100 0 chr10 84909439 84909698 -60679590 - L1ME4a LINE L1 -253 5868 5584 249 139 0 0 chr10 84909698 84909741 -60679547 + (CA)n Simple_repeat Simple_repeat 1 43 0 2472 127 86 10 chr10 84909741 84910136 -60679152 + MSTA LTR MaLR 1 425 -3 330 67 0 0 chr10 84910136 84910181 -60679107 + (CA)n Simple_repeat Simple_repeat 2 46 0 386 156 39 13 chr10 84910312 84910389 -60678899 - MIR SINE MIR -97 165 87 846 209 52 5 chr10 84910501 84910692 -60678596 - MER3 DNA MER1_type -9 200 1 694 220 99 0 chr10 84911050 84911241 -60678047 + L2 LINE L2 3102 3311 -2 229 222 12 49 chr10 84911920 84912001 -60677287 - L1 LINE L1 -3933 2213 2136 1943 193 48 0 chr10 84912615 84912994 -60676294 + MLT1F1 LTR MaLR 1 397 -170 782 185 53 0 chr10 84914020 84914171 -60675117 - MLT1F1 LTR MaLR -304 263 105 722 188 146 6 chr10 84914475 84914640 -60674648 + MER5A DNA MER1_type 1 188 -1 286 303 50 25 chr10 84914643 84914762 -60674526 + MIR SINE MIR 13 134 -128 221 316 105 13 chr10 84915309 84915385 -60673903 - MIR SINE MIR -104 104 22 298 332 43 43 chr10 84915385 84915572 -60673716 - MIR3 SINE MIR -2 206 20 671 246 77 11 chr10 84916239 84916422 -60672866 + MIR SINE MIR 31 225 -37 364 236 75 28 chr10 84916632 84916738 -60672550 - MIR SINE MIR -63 145 35 214 247 131 38 chr10 84916898 84917031 -60672257 - MER5B DNA MER1_type -5 173 50 257 277 81 0 chr10 84917107 84917207 -60672081 + MIR SINE MIR 69 175 -60 439 303 57 57 chr10 84918550 84918814 -60670474 - L3 LINE CR1 -43 1534 1271 280 350 24 24 chr10 84918928 84919051 -60670237 - MIR SINE MIR -98 164 42 1300 249 84 11 chr10 84919516 84919897 -60669391 + MLT1I LTR MaLR 1 409 0 183 271 0 0 chr10 84920764 84920812 -60668476 - L2 LINE L2 -2 3270 3223 769 230 86 79 chr10 84920949 84921366 -60667922 + MLT1H LTR MaLR 130 549 0 427 295 115 11 chr10 84921375 84921558 -60667730 - MIR SINE MIR -11 251 50 281 298 35 57 chr10 84922310 84922451 -60666837 - MIR3 SINE MIR -27 181 44 373 315 28 21 chr10 84922910 84923053 -60666235 + MIR3 SINE MIR 36 179 -29 262 304 0 22 chr10 84923282 84923374 -60665914 + GA-rich Low_complexity Low_complexity 2 91 0 697 226 6 18 chr10 84924570 84924738 -60664550 + MER63A DNA MER1_type 45 210 0 222 350 36 36 chr10 84924816 84924956 -60664332 + L2 LINE L2 2695 2834 -480 203 284 49 25 chr10 84925018 84925099 -60664189 + L2 LINE L2 3138 3220 -52 398 301 26 52 chr10 84925343 84925496 -60663792 - L2 LINE L2 0 3313 3165 451 319 94 55 chr10 84926083 84926633 -60662655 + L2 LINE L2 2213 2826 -446 204 40 0 0 chr10 84926633 84926658 -60662630 + (CCTG)n Simple_repeat Simple_repeat 2 26 0 451 319 94 55 chr10 84926658 84927008 -60662280 + L2 LINE L2 2826 3161 -111 425 264 45 17 chr10 84927144 84927325 -60661963 + MIR SINE MIR 35 220 -42 199 356 76 15 chr10 84927370 84927502 -60661786 - MIR SINE MIR -59 203 64 189 297 55 33 chr10 84928644 84928735 -60660553 - L2 LINE L2 -19 3253 3161 1280 245 65 21 chr10 84928820 84929248 -60660040 + MLT1C LTR MaLR 5 451 -16 294 313 43 43 chr10 84929259 84929467 -60659821 - L2 LINE L2 -195 3077 2870 245 293 49 12 chr10 84929929 84930011 -60659277 + MIR SINE MIR 162 246 -16 186 281 110 37 chr10 84930038 84930120 -60659168 + L2 LINE L2 3167 3254 -18 235 233 192 14 chr10 84930870 84930943 -60658345 - L2 LINE L2 -19 3294 3209 184 283 0 22 chr10 84931392 84931438 -60657850 + MIR SINE MIR 210 254 -8 299 200 31 31 chr10 84931584 84931649 -60657639 - MIR SINE MIR -103 105 41 1714 143 109 3 chr10 84932413 84932735 -60656553 + MER46B DNA MER2_type 1 231 -5 196 333 19 46 chr10 84932945 84933053 -60656235 + MIR SINE MIR 30 134 -74 1742 168 57 30 chr10 84933585 84933919 -60655369 + MER61A LTR ERV1 1 343 0 261 311 139 7 chr10 84934857 84935008 -60654280 + MIR SINE MIR 42 212 -50 317 320 20 10 chr10 84935072 84935172 -60654116 - MIR SINE MIR -37 225 125 186 43 0 0 chr10 84936289 84936312 -60652976 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 225 319 77 0 chr10 84936785 84936876 -60652412 - L2 LINE L2 -3 3269 3172 661 249 87 31 chr10 84936949 84937178 -60652110 - MIR SINE MIR -2 260 19 206 378 61 0 chr10 84939518 84939616 -60649672 - MIR SINE MIR -133 129 26 610 199 178 0 chr10 84939707 84939853 -60649435 - MER96 DNA MER1_type -3 172 1 393 102 0 0 chr10 84940050 84940109 -60649179 + (CA)n Simple_repeat Simple_repeat 2 60 0 207 295 26 13 chr10 84940196 84940274 -60649014 - L2 LINE L2 -338 2975 2897 185 216 0 135 chr10 84941273 84941347 -60647941 + MIR3 SINE MIR 120 183 -25 383 321 9 9 chr10 84941361 84941467 -60647821 - L2 LINE L2 -1 3271 3166 312 257 138 28 chr10 84941811 84941920 -60647368 - MIR SINE MIR -20 242 122 470 230 267 0 chr10 84942120 84942281 -60647007 + MER63B DNA MER1_type 1 204 -232 1233 302 39 29 chr10 84942502 84943015 -60646273 - MLT1E LTR MaLR -58 535 18 521 290 67 42 chr10 84943048 84943286 -60646002 - MIR SINE MIR 0 262 19 324 317 49 14 chr10 84943304 84943446 -60645842 - MIR3 SINE MIR -27 181 35 269 308 75 95 chr10 84944396 84944701 -60644587 - L2 LINE L2 0 3272 2974 246 321 95 24 chr10 84944742 84944994 -60644294 - L1M3 LINE L1 -490 5681 5412 343 333 55 37 chr10 84945012 84945502 -60643786 - L1M3 LINE L1 -771 5375 4877 1857 219 37 18 chr10 84945525 84945981 -60643307 + LTR40a LTR ERVL 1 465 -54 536 289 189 32 chr10 84946058 84946958 -60642330 - L1M3 LINE L1 -1347 4799 3759 1046 287 84 27 chr10 84946995 84947472 -60641816 - L2 LINE L2 -515 2799 2296 335 342 7 26 chr10 84947859 84948011 -60641277 - LTR67 LTR ERVL -406 151 3 1609 223 34 12 chr10 84948057 84948101 -60641187 - L1ME2 LINE L1 -265 5899 5857 360 0 0 0 chr10 84948101 84948141 -60641147 + (TG)n Simple_repeat Simple_repeat 2 41 0 1609 223 34 12 chr10 84948141 84948504 -60640784 - L1ME2 LINE L1 -307 5857 5483 267 355 9 9 chr10 84948669 84948776 -60640512 + MIR3 SINE MIR 87 193 -15 21 0 0 0 chr10 84948883 84948904 -60640384 + AT_rich Low_complexity Low_complexity 1 21 0 201 256 158 24 chr10 84948972 84949054 -60640234 - MIR SINE MIR -11 251 159 1665 159 58 33 chr10 84949100 84949360 -60639928 - MLT2B2 LTR ERVL 0 515 263 1262 172 88 63 chr10 84949360 84949645 -60639643 - AluJo SINE Alu -20 292 1 1665 159 58 33 chr10 84949645 84949841 -60639447 - MLT2B2 LTR ERVL -252 263 1 366 206 78 186 chr10 84949841 84950239 -60639049 + L2 LINE L2 2957 3311 -2 366 253 262 18 chr10 84950365 84950594 -60638694 + L2 LINE L2 3028 3312 -1 302 303 80 62 chr10 84950676 84950838 -60638450 + L2 LINE L2 3108 3272 0 214 330 85 8 chr10 84951755 84951873 -60637415 - L2 LINE L2 -218 3054 2928 333 320 156 14 chr10 84951971 84952336 -60636952 - MLT1L LTR MaLR -4 611 195 231 184 0 0 chr10 84952383 84952421 -60636867 - MLT1L LTR MaLR -531 84 47 1485 223 46 0 chr10 84952730 84953053 -60636235 + MLT1A1 LTR MaLR 24 361 -4 314 301 98 16 chr10 84953177 84953300 -60635988 + MIR3 SINE MIR 14 146 -62 256 317 55 73 chr10 84954391 84954555 -60634733 - MIR SINE MIR -75 187 27 347 374 47 0 chr10 84955374 84955545 -60633743 - MIR SINE MIR -59 203 25 227 333 41 32 chr10 84955645 84955768 -60633520 - MIR3 SINE MIR -11 197 74 502 329 145 17 chr10 84956699 84957303 -60631985 - L2 LINE L2 -4 3268 2606 325 340 7 48 chr10 84957988 84958135 -60631153 - MIR3 SINE MIR -65 143 3 239 310 0 0 chr10 84958677 84958735 -60630553 + L3 LINE CR1 1520 1577 0 395 289 18 9 chr10 84958852 84958966 -60630322 + L2 LINE L2 3196 3310 -3 1551 197 92 28 chr10 84958970 84959233 -60630055 - MLT1C LTR MaLR -2 465 161 2059 121 0 3 chr10 84959233 84959538 -60629750 - AluSx SINE Alu -8 304 1 1551 197 92 28 chr10 84959538 84959711 -60629577 - MLT1C LTR MaLR -306 161 1 292 260 40 0 chr10 84959883 84959983 -60629305 - MIR3 SINE MIR -28 180 77 6417 122 45 81 chr10 84961026 84961319 -60627969 + Tigger3b DNA MER2_type 14 316 -2712 233 29 29 0 chr10 84961319 84961353 -60627935 + (TA)n Simple_repeat Simple_repeat 2 36 0 6417 122 45 81 chr10 84961353 84962022 -60627266 + Tigger3b DNA MER2_type 316 922 -2106 7501 37 0 0 chr10 84962022 84963172 -60626116 - L1PA4 LINE L1 -2 6153 4999 6417 122 45 81 chr10 84963172 84963465 -60625823 + Tigger3b DNA MER2_type 922 1224 -7 277 146 18 55 chr10 84963483 84963538 -60625750 - L1MD2 LINE L1 -250 6109 6057 243 167 13 26 chr10 84963573 84963651 -60625637 + (TA)n Simple_repeat Simple_repeat 1 77 0 5810 239 59 23 chr10 84963651 84965724 -60623564 - L1MD2 LINE L1 -758 5388 3319 205 122 224 0 chr10 84966999 84967048 -60622240 + MIR SINE MIR 88 147 -61 311 236 48 33 chr10 84967750 84967850 -60621438 - MIR SINE MIR -61 147 71 207 282 13 26 chr10 84968730 84968808 -60620480 + L2 LINE L2 3172 3248 -24 900 97 17 23 chr10 84969017 84969057 -60620231 + (GGAA)n Simple_repeat Simple_repeat 1 214 0 900 97 17 23 chr10 84969057 84969233 -60620055 + (GGAA)n Simple_repeat Simple_repeat 2 176 0 293 224 15 30 chr10 84969374 84969441 -60619847 + G-rich Low_complexity Low_complexity 6 71 0 188 267 67 0 chr10 84970058 84970118 -60619170 + MIR3 SINE MIR 119 182 -26 192 248 185 13 chr10 84971882 84972039 -60617249 + L2 LINE L2 2885 3068 -204 293 287 37 19 chr10 84972094 84972202 -60617086 - MIR SINE MIR -33 229 120 337 295 40 27 chr10 84972752 84972901 -60616387 - MIR SINE MIR -35 227 77 262 280 51 42 chr10 84973367 84973485 -60615803 + MIR3 SINE MIR 79 197 -11 336 300 170 30 chr10 84973486 84973686 -60615602 + MIR SINE MIR 16 243 -19 359 244 108 0 chr10 84973751 84973875 -60615413 - MIR SINE MIR -64 144 6 391 268 12 83 chr10 84974035 84974203 -60615085 + MIR SINE MIR 32 147 -61 2152 111 3 0 chr10 84974233 84974530 -60614758 + AluSx SINE Alu 1 298 -14 503 294 68 0 chr10 84975375 84975538 -60613750 - MIR SINE MIR -67 195 22 3780 162 51 31 chr10 84975907 84975985 -60613303 - L1MB3 LINE L1 -121 6062 5987 2122 122 3 0 chr10 84975985 84976296 -60612992 - AluSq SINE Alu 0 313 2 3780 162 51 31 chr10 84976296 84976984 -60612304 - L1MB3 LINE L1 -196 5987 5281 500 273 87 3 chr10 84977101 84977275 -60612013 - MIR SINE MIR -69 139 3 254 288 62 0 chr10 84977816 84977896 -60611392 - MIR SINE MIR -78 130 46 400 228 0 25 chr10 84978822 84978896 -60610392 + GA-rich Low_complexity Low_complexity 1 75 -79 2535 142 33 21 chr10 84978896 84979318 -60609970 - MSTA LTR MaLR 0 428 2 400 228 0 25 chr10 84979318 84979401 -60609887 + GA-rich Low_complexity Low_complexity 75 154 0 266 167 17 0 chr10 84979423 84979483 -60609805 + GA-rich Low_complexity Low_complexity 3 63 0 272 286 138 13 chr10 84981506 84981654 -60607634 - MIR SINE MIR -62 146 19 402 311 62 19 chr10 84982547 84982804 -60606484 + L2 LINE L2 2595 2862 -452 276 296 37 19 chr10 84983070 84983178 -60606110 - L2 LINE L2 -5 3267 3158 270 0 0 0 chr10 84983263 84983293 -60605995 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 254 323 138 20 chr10 84983313 84983508 -60605780 + L3 LINE CR1 1310 1527 -50 443 220 8 102 chr10 84983521 84983639 -60605649 + MIR3 SINE MIR 51 157 -51 200 340 57 9 chr10 84983848 84983954 -60605334 - L2 LINE L2 -217 3055 2945 221 336 99 23 chr10 84984722 84984853 -60604435 - MIR3 SINE MIR -25 183 43 23 0 0 0 chr10 84986041 84986064 -60603224 + AT_rich Low_complexity Low_complexity 1 23 0 22 56 0 0 chr10 84986774 84986810 -60602478 + AT_rich Low_complexity Low_complexity 1 36 0 277 295 63 31 chr10 84987824 84987971 -60601317 - MIR SINE MIR -62 146 17 327 284 81 27 chr10 84988010 84988158 -60601130 + MER96 DNA MER1_type? 9 164 -11 319 292 29 58 chr10 84989461 84989524 -60599764 - L1ME4a LINE L1 0 6121 6058 2120 97 0 7 chr10 84989524 84989823 -60599465 - AluSg SINE Alu -13 297 1 319 292 29 58 chr10 84989823 84989896 -60599392 - L1ME4a LINE L1 -63 6058 5989 199 295 0 33 chr10 84990737 84990798 -60598490 + MIR SINE MIR 204 262 0 763 298 57 62 chr10 84991040 84991429 -60597859 + MLT1K LTR MaLR 190 576 -12 564 306 0 33 chr10 84992247 84992430 -60596858 - MIR3 SINE MIR -17 191 15 296 293 52 40 chr10 84992617 84992791 -60596497 - MLT1H LTR MaLR -16 579 404 617 224 97 24 chr10 84992876 84993041 -60596247 - MLT1H LTR MaLR -324 225 49 1389 215 7 101 chr10 84993624 84994062 -60595226 - MLT2C1 LTR ERVL 0 397 1 5220 159 111 115 chr10 84994073 84995129 -60594159 - ERVL-C1 LTR ERVL -12 5752 4694 327 58 0 39 chr10 84995129 84995181 -60594107 + MADE1 DNA Mariner 28 77 -3 289 29 0 0 chr10 84995170 84995205 -60594083 - MADE1 DNA Mariner -45 35 1 * 5220 159 111 115 chr10 84995205 84995434 -60593854 - ERVL-C1 LTR ERVL -1094 4670 4397 316 234 16 0 chr10 84995522 84995586 -60593702 - L2 LINE L2 -3 3269 3205 297 271 21 42 chr10 84996457 84996553 -60592735 + MIR3 SINE MIR 86 179 -29 392 236 163 64 chr10 84996862 84997065 -60592223 + MLT1H LTR MaLR 132 354 -195 484 304 128 44 chr10 84997289 84997836 -60591452 - L3 LINE CR1 -122 1455 863 449 272 267 35 chr10 84998518 84998889 -60590399 - L3 LINE CR1 -2 1575 1119 1441 166 62 118 chr10 84999271 84999710 -60589578 - MLT2D LTR ERVL 0 414 1 216 97 0 0 chr10 84999972 85000003 -60589285 + (TA)n Simple_repeat Simple_repeat 2 32 0 1777 156 13 96 chr10 85000479 85000877 -60588411 - MLT1A1 LTR MaLR 0 365 1 1198 159 48 5 chr10 85001102 85001310 -60587978 - MER20 DNA MER1_type -2 217 1 1455 226 154 45 chr10 85002176 85002623 -60586665 - MLT1C LTR MaLR -1 466 9 3179 213 78 21 chr10 85004396 85005377 -60583911 - L1ME1 LINE L1 -3 6163 5123 200 213 0 21 chr10 85005432 85005479 -60583809 - MIR SINE MIR -2 260 215 * 278 290 86 0 chr10 85005455 85005548 -60583740 - L2 LINE L2 -30 3242 3142 206 374 35 17 chr10 85005753 85005868 -60583420 + L3b LINE CR1 1286 1402 -181 855 249 133 43 chr10 85006977 85007398 -60581890 - MLT1J LTR MaLR -44 467 9 301 319 43 9 chr10 85007825 85007941 -60581347 - L2 LINE L2 -1 3312 3193 262 170 340 0 chr10 85008122 85008175 -60581113 - MER81 DNA DNA -42 72 2 574 279 25 12 chr10 85008175 85008336 -60580952 + MIR SINE MIR 68 230 -32 319 312 46 9 chr10 85008747 85008856 -60580432 - L2 LINE L2 0 3313 3201 292 359 180 8 chr10 85009122 85009250 -60580038 - L2 LINE L2 -4 3268 3119 1489 212 16 49 chr10 85009262 85009648 -60579640 + MLT1A2 LTR MaLR 1 373 -1 305 286 48 29 chr10 85011105 85011210 -60578078 - MER5A DNA MER1_type -80 109 3 665 285 26 42 chr10 85011232 85011544 -60577744 + MER102b DNA MER1_type 12 318 -23 191 231 39 0 chr10 85011564 85011616 -60577672 - MIR3 SINE MIR -46 162 109 180 219 0 0 chr10 85011679 85011711 -60577577 + L2 LINE L2 3241 3272 0 198 143 0 0 chr10 85013034 85013069 -60576219 + (GAAA)n Simple_repeat Simple_repeat 3 37 0 273 180 0 20 chr10 85013160 85013210 -60576078 + L2 LINE L2 3223 3271 -1 352 250 113 9 chr10 85013645 85013795 -60575493 + MIR3 SINE MIR 39 201 -7 223 269 161 0 chr10 85014533 85014626 -60574662 - MIR SINE MIR -71 191 84 220 301 70 70 chr10 85015212 85015355 -60573933 + MIR3 SINE MIR 7 149 -59 236 255 20 0 chr10 85015925 85015976 -60573312 + L3 LINE CR1 1502 1553 -24 2265 92 0 3 chr10 85015978 85016284 -60573004 - AluSg SINE Alu -5 305 1 495 234 62 14 chr10 85016392 85016537 -60572751 - MER103 DNA DNA -1 165 14 544 296 29 103 chr10 85017105 85017416 -60571872 + L2 LINE L2 2985 3272 0 227 303 66 57 chr10 85017736 85017858 -60571430 - MIR3 SINE MIR -5 203 81 241 151 0 14 chr10 85018030 85018075 -60571213 - MIR SINE MIR -105 157 115 1905 129 4 0 chr10 85018224 85018503 -60570785 + AluSq SINE Alu 1 280 -33 228 86 0 0 chr10 85018503 85018538 -60570750 + (CAAA)n Simple_repeat Simple_repeat 1 35 0 215 288 0 15 chr10 85018570 85018636 -60570652 + L2 LINE L2 3249 3313 0 442 252 36 9 chr10 85020329 85020440 -60568848 + MIR3 SINE MIR 91 204 -4 3508 89 20 4 chr10 85022392 85022898 -60566390 + L1PA11 LINE L1 5276 5789 -379 784 83 0 0 chr10 85022898 85022994 -60566294 + L1PA7 LINE L1 1 96 -6365 * 30566 95 5 21 chr10 85022992 85028419 -60560869 + L1PA7 LINE L1 1162 6469 0 2738 95 36 5 chr10 85028419 85028801 -60560487 + L1PA11 LINE L1 5769 6168 -6 212 316 0 0 chr10 85029745 85029802 -60559486 - MIR SINE MIR -110 98 42 270 278 87 43 chr10 85029859 85029974 -60559314 - MIR SINE MIR -93 169 50 931 179 5 27 chr10 85030117 85030301 -60558987 + MER5A DNA MER1_type 4 183 -6 448 236 229 14 chr10 85030320 85030460 -60558828 - MER5B DNA MER1_type -7 171 2 225 143 0 0 chr10 85031717 85031752 -60557536 - L2 LINE L2 0 3313 3279 228 272 25 12 chr10 85031767 85031848 -60557440 - MLT1L LTR MaLR -15 600 519 668 230 0 0 chr10 85032005 85032153 -60557135 - L1MA10 LINE L1 0 6334 6187 300 311 0 0 chr10 85032201 85032275 -60557013 - MLT1J LTR MaLR -333 178 105 202 73 49 0 chr10 85032287 85032328 -60556960 + T-rich Low_complexity Low_complexity 4 46 0 45056 38 1 3 chr10 85032329 85038487 -60550801 - L1PA4 LINE L1 -1 6154 13 318 296 83 52 chr10 85038789 85039015 -60550273 - MIR SINE MIR -6 256 19 472 213 120 60 chr10 85039421 85039571 -60549717 + MIR SINE MIR 20 178 -84 189 0 0 0 chr10 85040240 85040261 -60549027 + (GA)n Simple_repeat Simple_repeat 1 21 0 231 200 146 0 chr10 85040275 85040330 -60548958 + MER103 DNA DNA 38 100 -66 409 234 75 0 chr10 85041559 85041666 -60547622 - MIR SINE MIR -82 180 66 446 202 12 0 chr10 85041915 85041999 -60547289 + MIR SINE MIR 80 164 -98 214 241 46 65 chr10 85042128 85042236 -60547052 + MIR SINE MIR 143 248 -14 735 316 92 19 chr10 85042382 85042898 -60546390 - L2 LINE L2 -26 3287 2734 256 277 11 0 chr10 85044001 85044178 -60545110 + (TG)n Simple_repeat Simple_repeat 2 180 0 336 130 37 46 chr10 85044794 85044902 -60544386 + CT-rich Low_complexity Low_complexity 1 107 0 2080 110 0 0 chr10 85045789 85046081 -60543207 - AluSq SINE Alu -15 298 7 282 305 178 8 chr10 85046294 85046412 -60542876 + MIR SINE MIR 8 145 -63 312 313 124 0 chr10 85047055 85047187 -60542101 - MIR3 SINE MIR -41 167 46 501 236 194 18 chr10 85048246 85048411 -60540877 + MER63A DNA MER1_type 12 205 -5 234 245 0 0 chr10 85048457 85048510 -60540778 + GA-rich Low_complexity Low_complexity 2 54 0 181 294 20 0 chr10 85049337 85049388 -60539900 - MIR3 SINE MIR -42 166 115 248 333 64 21 chr10 85049433 85049574 -60539714 + L2 LINE L2 2910 3056 -216 1961 248 59 18 chr10 85050050 85050776 -60538512 + L1ME3A LINE L1 5124 5819 -351 1957 122 0 4 chr10 85050776 85051055 -60538233 + AluSx SINE Alu 1 278 -34 657 69 0 0 chr10 85051057 85051144 -60538144 + (GAAA)n Simple_repeat Simple_repeat 2 88 0 1961 248 59 18 chr10 85051144 85051207 -60538081 + L1ME3A LINE L1 5819 5951 -219 1969 242 31 59 chr10 85051262 85051279 -60538009 - L1MC4 LINE L1 -111 7931 7915 212 59 29 0 chr10 85051279 85051313 -60537975 + (TG)n Simple_repeat Simple_repeat 2 36 0 1969 242 31 59 chr10 85051313 85051977 -60537311 - L1MC4 LINE L1 -127 7915 7269 222 250 42 62 chr10 85051990 85052086 -60537202 - L2 LINE L2 -24 3248 3155 236 294 43 11 chr10 85052101 85052193 -60537095 - MIR SINE MIR -10 252 158 553 262 187 19 chr10 85052267 85052481 -60536807 - MIR SINE MIR 0 262 13 184 100 50 0 chr10 85052519 85052559 -60536729 + G-rich Low_complexity Low_complexity 2 43 0 466 210 25 25 chr10 85054054 85054173 -60535115 - MIR SINE MIR -78 184 66 380 179 81 81 chr10 85055090 85055213 -60534075 - L2 LINE L2 0 3313 3191 335 301 28 56 chr10 85055507 85055650 -60533638 + MIR SINE MIR 54 192 -70 560 236 8 0 chr10 85055848 85055975 -60533313 + MER94 DNA DNA 6 133 -1 1367 250 61 70 chr10 85056087 85056743 -60532545 + MLT1E1 LTR MaLR 3 652 -2 320 366 23 0 chr10 85057039 85057170 -60532118 - MIR SINE MIR -108 154 21 224 281 93 58 chr10 85057237 85057376 -60531912 - MIR SINE MIR -26 236 93 * 360 265 45 139 chr10 85057368 85057677 -60531611 - L2 LINE L2 0 3272 2993 202 315 14 0 chr10 85057865 85057938 -60531350 + (CA)n Simple_repeat Simple_repeat 2 75 0 318 286 0 0 chr10 85057949 85058112 -60531176 + (CA)n Simple_repeat Simple_repeat 1 163 0 235 241 157 24 chr10 85058682 85058765 -60530523 - MIR SINE MIR -56 206 113 183 352 65 9 chr10 85059476 85059584 -60529704 + L3b LINE CR1 1322 1435 -148 4455 189 36 7 chr10 85059835 85061423 -60527865 + L1MB7 LINE L1 4549 6184 0 359 299 16 95 chr10 85061518 85061822 -60527466 - L1ME4a LINE L1 -225 5896 5617 22 0 0 0 chr10 85062185 85062207 -60527081 + AT_rich Low_complexity Low_complexity 1 22 0 3181 14 0 0 chr10 85062511 85062875 -60526413 - L1P LINE L1 -1435 4711 4348 823 144 8 0 chr10 85063761 85063886 -60525402 - FLAM_C SINE Alu -7 126 1 302 203 72 27 chr10 85065025 85065152 -60524136 - MLT1J LTR MaLR -276 319 176 4622 28 0 0 chr10 85065152 85065680 -60523608 + L1PA5 LINE L1 5463 5990 -164 1461 223 129 17 chr10 85065827 85066053 -60523235 - MLT1D LTR MaLR -43 462 263 1576 173 3 54 chr10 85066053 85066366 -60522922 - AluJo SINE Alu -5 297 1 1461 223 129 17 chr10 85066366 85066551 -60522737 - MLT1D LTR MaLR -242 263 5 199 311 87 10 chr10 85067050 85067153 -60522135 + L2 LINE L2 3137 3247 -25 181 282 64 26 chr10 85068205 85068283 -60521005 - MIR SINE MIR -153 109 29 629 216 19 55 chr10 85068478 85068678 -60520610 + MLT1F LTR MaLR 375 542 0 662 283 98 78 chr10 85069352 85069851 -60519437 - MLT1H LTR MaLR -2 547 39 360 297 116 47 chr10 85069929 85070309 -60518979 + LTR33A LTR ERVL 71 476 -47 225 143 0 0 chr10 85071861 85071896 -60517392 - L2 LINE L2 0 3313 3279 228 272 25 12 chr10 85071911 85071992 -60517296 - MLT1L LTR MaLR -15 600 519 668 230 0 0 chr10 85072149 85072297 -60516991 - L1MA10 LINE L1 0 6334 6187 320 297 0 0 chr10 85072345 85072419 -60516869 - MLT1J LTR MaLR -333 178 105 202 73 49 0 chr10 85072431 85072472 -60516816 + T-rich Low_complexity Low_complexity 4 46 0 7565 39 0 0 chr10 85072473 85073629 -60515659 - L1PA4 LINE L1 -1 6154 4999 1679 149 40 7 chr10 85073646 85073922 -60515366 + Tigger3(Golem) DNA MER2_type 2738 3022 -7 277 146 18 55 chr10 85073940 85073995 -60515293 - L1MD2 LINE L1 -250 6109 6057 240 107 0 71 chr10 85074004 85074060 -60515228 + LTR66 LTR ERVL 382 433 -177 5725 240 59 24 chr10 85074110 85076184 -60513104 - L1MD2 LINE L1 -758 5388 3319 743 191 12 40 chr10 85077107 85077280 -60512008 - MER5A DNA MER1_type -18 171 4 270 278 87 43 chr10 85077423 85077538 -60511750 + MIR SINE MIR 50 169 -93 212 316 0 0 chr10 85077595 85077652 -60511636 + MIR SINE MIR 42 98 -110 2738 95 36 5 chr10 85078596 85078984 -60510304 - L1PA11 LINE L1 -6 6168 5769 204 97 0 0 chr10 85078993 85079024 -60510264 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 30558 95 5 20 chr10 85079024 85084400 -60504888 - L1PA7 LINE L1 -11 6458 1162 784 83 0 0 chr10 85084398 85084494 -60504794 - L1PA7 LINE L1 -6365 96 1 * 3508 89 20 4 chr10 85084494 85085000 -60504288 - L1PA11 LINE L1 -379 5789 5276 431 223 32 11 chr10 85086951 85087045 -60502243 - MIR3 SINE MIR -4 204 109 380 179 81 81 chr10 85087105 85087228 -60502060 + L2 LINE L2 3191 3313 0 422 203 42 34 chr10 85088145 85088263 -60501025 + MIR SINE MIR 66 184 -78 1303 279 17 10 chr10 85089347 85089749 -60499539 - L1MC4 LINE L1 -369 7673 7269 222 250 42 62 chr10 85089762 85089858 -60499430 - L2 LINE L2 -24 3248 3155 236 294 43 11 chr10 85089873 85089965 -60499323 - MIR SINE MIR -10 252 158 425 257 196 28 chr10 85090039 85090253 -60499035 - MIR SINE MIR 0 262 13 1588 169 0 49 chr10 85091939 85092247 -60497041 - AluJb SINE Alu -12 300 8 527 264 16 8 chr10 85092253 85092378 -60496910 - MIR SINE MIR -112 150 25 677 201 22 76 chr10 85092471 85092655 -60496633 + MER5B DNA MER1_type 1 174 -4 1216 223 67 14 chr10 85092915 85093198 -60496090 - AluJo SINE Alu -2 300 3 411 288 48 20 chr10 85093575 85093721 -60495567 + MIR SINE MIR 15 164 -98 586 185 103 5 chr10 85093721 85093916 -60495372 + AluJo SINE Alu 85 298 -14 216 67 0 0 chr10 85094061 85094091 -60495197 + (TAA)n Simple_repeat Simple_repeat 2 31 0 305 265 12 0 chr10 85094124 85094207 -60495081 - L1MC/D LINE L1 -2290 5518 5435 364 272 56 31 chr10 85094208 85094370 -60494918 + L2 LINE L2 2641 2806 -508 805 164 0 8 chr10 85094510 85094644 -60494644 - FLAM_C SINE Alu 0 133 1 836 168 26 52 chr10 85095196 85095387 -60493901 - L1PA15 LINE L1 -201 5964 5779 2177 68 34 10 chr10 85095400 85095694 -60493594 - AluSq SINE Alu -12 301 1 336 183 56 0 chr10 85095695 85095766 -60493522 - MER5A DNA MER1_type -114 75 1 488 281 66 18 chr10 85095777 85095944 -60493344 - MIR SINE MIR -70 192 18 203 306 48 107 chr10 85097197 85097403 -60491885 - L2 LINE L2 -107 3165 2972 565 282 96 5 chr10 85097691 85097741 -60491547 - MIR SINE MIR 0 262 218 2307 111 73 15 chr10 85097741 85098084 -60491204 - THE1B LTR MaLR -1 363 1 565 282 96 5 chr10 85098084 85098221 -60491067 - MIR SINE MIR -44 218 58 257 274 89 16 chr10 85098398 85098522 -60490766 - L2 LINE L2 -1 3271 3139 647 203 158 0 chr10 85098911 85099069 -60490219 - MER5A DNA MER1_type 0 189 7 960 241 147 27 chr10 85099074 85099481 -60489807 + MLT1L LTR MaLR 160 615 0 501 334 83 36 chr10 85099537 85099649 -60489639 + L2 LINE L2 2152 2257 -1057 2374 118 28 6 chr10 85099649 85100004 -60489284 + THE1B LTR MaLR 1 363 -1 501 334 83 36 chr10 85100004 85100448 -60488840 + L2 LINE L2 2257 2734 -580 324 197 16 0 chr10 85100452 85100513 -60488775 + MER5A DNA MER1_type 125 186 -3 283 286 22 11 chr10 85100550 85100641 -60488647 - MLT1L LTR MaLR -508 107 16 221 317 17 0 chr10 85100728 85100788 -60488500 - L2 LINE L2 -6 3307 3247 188 35 35 0 chr10 85100802 85100831 -60488457 + (TTTTTG)n Simple_repeat Simple_repeat 1 30 0 1191 272 86 25 chr10 85100901 85101342 -60487946 + MLT1K LTR MaLR 110 577 -11 270 56 37 19 chr10 85101399 85101453 -60487835 + (TTTTA)n Simple_repeat Simple_repeat 2 56 0 1948 100 0 14 chr10 85101463 85101744 -60487544 - AluY SINE Alu -33 278 2 1742 156 7 3 chr10 85101747 85102042 -60487246 - AluJb SINE Alu -16 296 1 206 173 0 19 chr10 85102640 85102692 -60486596 + CT-rich Low_complexity Low_complexity 2 52 0 189 0 0 0 chr10 85102704 85102725 -60486563 + (TG)n Simple_repeat Simple_repeat 1 21 0 1635 342 75 36 chr10 85102739 85103845 -60485443 + L3 LINE CR1 400 1548 -29 562 311 107 0 chr10 85104357 85104553 -60484735 + MIR SINE MIR 2 218 -44 183 326 133 20 chr10 85104914 85105012 -60484276 + MIR3 SINE MIR 2 110 -98 235 273 0 18 chr10 85105015 85105070 -60484218 - MIR SINE MIR -59 203 150 318 324 19 19 chr10 85105638 85105746 -60483542 - MIR SINE MIR -110 152 45 180 298 0 0 chr10 85106011 85106058 -60483230 - L2 LINE L2 -1 3312 3266 1529 192 83 9 chr10 85106506 85106844 -60482444 + MLT1A1 LTR MaLR 3 365 0 360 315 171 23 chr10 85106850 85107066 -60482222 + MIR SINE MIR 9 256 -6 228 216 0 91 chr10 85108444 85108532 -60480756 - MIR3 SINE MIR -20 188 109 406 244 233 0 chr10 85109027 85109199 -60480089 + L2 LINE L2 3102 3313 0 232 288 82 0 chr10 85109260 85109333 -60479955 - L2 LINE L2 -177 3095 3017 244 216 128 112 chr10 85109986 85110111 -60479177 + MIR SINE MIR 18 144 -64 489 306 49 99 chr10 85110238 85110683 -60478605 + L1ME1 LINE L1 3215 3637 -2509 2226 184 29 5 chr10 85110710 85111124 -60478164 + MSTA LTR MaLR 1 424 -4 2340 84 0 10 chr10 85111164 85111475 -60477813 + AluSq SINE Alu 1 308 -5 3621 212 59 12 chr10 85111704 85112690 -60476598 + L1ME1 LINE L1 5120 6155 -11 1643 184 91 47 chr10 85112724 85113132 -60476156 - MSTB LTR MaLR 0 426 1 204 359 39 0 chr10 85114045 85114148 -60475140 + L3 LINE CR1 1346 1452 -125 1982 276 121 47 chr10 85114231 85115577 -60473711 + L1MEc LINE L1 53 1498 -4898 243 223 304 18 chr10 85116145 85116257 -60473031 - MER5A DNA MER1_type -33 156 13 255 381 31 0 chr10 85116706 85116803 -60472485 + MIR SINE MIR 107 206 -56 305 312 110 41 chr10 85116822 85117040 -60472248 + MIR SINE MIR 24 256 -6 2823 178 15 30 chr10 85118653 85119250 -60470038 - L1MB7 LINE L1 -5 6179 5592 258 331 42 7 chr10 85119369 85119511 -60469777 + LTR67 LTR ERVL 408 554 -3 462 293 128 21 chr10 85119973 85120161 -60469127 + LTR16C LTR ERVL 284 491 0 201 74 0 0 chr10 85120769 85120796 -60468492 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 2166 93 3 3 chr10 85121216 85121518 -60467770 + AluSq SINE Alu 1 302 -11 425 245 76 60 chr10 85121619 85121803 -60467485 + LTR16C LTR ERVL 288 474 -17 270 0 0 0 chr10 85122466 85122496 -60466792 + (CA)n Simple_repeat Simple_repeat 2 31 0 229 314 158 10 chr10 85122974 85123277 -60466011 + L2 LINE L2 2533 2880 -434 205 400 43 47 chr10 85123382 85123682 -60465606 + L2 LINE L2 2974 3272 0 485 198 99 112 chr10 85124156 85124459 -60464829 + MLT1C LTR MaLR 6 304 -163 873 191 58 122 chr10 85125163 85125457 -60463831 - THE1C LTR MaLR 0 375 81 260 278 11 11 chr10 85125623 85125713 -60463575 + C-rich Low_complexity Low_complexity 6 95 0 1243 241 40 26 chr10 85125862 85126001 -60463287 - L1M4 LINE L1 -607 5567 5431 1911 82 0 0 chr10 85126001 85126246 -60463042 - L1PA7 LINE L1 -14 6140 5896 1243 241 40 26 chr10 85126246 85126679 -60462609 - L1M4 LINE L1 -743 5431 4985 363 302 43 17 chr10 85127910 85128026 -60461262 + L2 LINE L2 3189 3307 -6 467 318 20 12 chr10 85128198 85128424 -60460864 + GA-rich Low_complexity Low_complexity 1 227 0 234 73 36 55 chr10 85128477 85128532 -60460756 + (TCTCC)n Simple_repeat Simple_repeat 1 54 0 2080 110 0 0 chr10 85129419 85129711 -60459577 - AluSq SINE Alu -15 298 7 282 305 178 8 chr10 85129924 85130042 -60459246 + MIR SINE MIR 8 145 -63 312 313 124 0 chr10 85130685 85130817 -60458471 - MIR3 SINE MIR -41 167 46 501 236 194 18 chr10 85131876 85132041 -60457247 + MER63A DNA MER1_type 12 205 -5 234 245 0 0 chr10 85132087 85132140 -60457148 + GA-rich Low_complexity Low_complexity 2 54 0 181 294 20 0 chr10 85132967 85133018 -60456270 - MIR3 SINE MIR -42 166 115 248 333 64 21 chr10 85133063 85133204 -60456084 + L2 LINE L2 2910 3056 -216 1961 248 59 18 chr10 85133680 85134406 -60454882 + L1ME3A LINE L1 5124 5819 -351 1957 122 0 4 chr10 85134406 85134685 -60454603 + AluSx SINE Alu 1 278 -34 657 69 0 0 chr10 85134687 85134774 -60454514 + (GAAA)n Simple_repeat Simple_repeat 2 88 0 1961 248 59 18 chr10 85134774 85134837 -60454451 + L1ME3A LINE L1 5819 5951 -219 1969 242 31 59 chr10 85134892 85134909 -60454379 - L1MC4 LINE L1 -111 7931 7915 212 59 29 0 chr10 85134909 85134943 -60454345 + (TG)n Simple_repeat Simple_repeat 2 36 0 1969 242 31 59 chr10 85134943 85135607 -60453681 - L1MC4 LINE L1 -127 7915 7269 222 250 42 62 chr10 85135620 85135716 -60453572 - L2 LINE L2 -24 3248 3155 236 294 43 11 chr10 85135731 85135823 -60453465 - MIR SINE MIR -10 252 158 553 262 187 19 chr10 85135897 85136111 -60453177 - MIR SINE MIR 0 262 13 184 100 50 0 chr10 85136149 85136189 -60453099 + G-rich Low_complexity Low_complexity 2 43 0 466 210 25 25 chr10 85137684 85137803 -60451485 - MIR SINE MIR -78 184 66 380 179 81 81 chr10 85138720 85138843 -60450445 - L2 LINE L2 0 3313 3191 335 301 28 56 chr10 85139137 85139280 -60450008 + MIR SINE MIR 54 192 -70 560 236 8 0 chr10 85139478 85139605 -60449683 + MER94 DNA DNA 6 133 -1 1367 250 61 70 chr10 85139717 85140373 -60448915 + MLT1E1 LTR MaLR 3 652 -2 320 366 23 0 chr10 85140669 85140800 -60448488 - MIR SINE MIR -108 154 21 224 281 93 58 chr10 85140867 85141006 -60448282 - MIR SINE MIR -26 236 93 * 360 265 45 139 chr10 85140998 85141307 -60447981 - L2 LINE L2 0 3272 2993 202 315 14 0 chr10 85141495 85141568 -60447720 + (CA)n Simple_repeat Simple_repeat 2 75 0 318 269 0 0 chr10 85141579 85141724 -60447564 + (CA)n Simple_repeat Simple_repeat 2 146 0 235 241 157 24 chr10 85142312 85142395 -60446893 - MIR SINE MIR -56 206 113 183 352 65 9 chr10 85143106 85143214 -60446074 + L3b LINE CR1 1322 1435 -148 4455 189 36 8 chr10 85143465 85145054 -60444234 + L1MB7 LINE L1 4549 6184 0 359 299 16 95 chr10 85145149 85145453 -60443835 - L1ME4a LINE L1 -225 5896 5617 274 283 63 54 chr10 85145580 85145761 -60443527 + MIR SINE MIR 19 196 -58 203 306 48 107 chr10 85148113 85148319 -60440969 - L2 LINE L2 -107 3165 2972 565 282 96 5 chr10 85148607 85148657 -60440631 - MIR SINE MIR 0 262 218 2307 111 73 15 chr10 85148657 85149000 -60440288 - THE1B LTR MaLR -1 363 1 565 282 96 5 chr10 85149000 85149137 -60440151 - MIR SINE MIR -44 218 58 257 274 89 16 chr10 85149314 85149438 -60439850 - L2 LINE L2 -1 3271 3139 647 203 158 0 chr10 85149827 85149985 -60439303 - MER5A DNA MER1_type 0 189 7 942 243 147 27 chr10 85149990 85150397 -60438891 + MLT1L LTR MaLR 160 615 0 501 334 83 36 chr10 85150453 85150565 -60438723 + L2 LINE L2 2152 2257 -1057 2374 118 28 6 chr10 85150565 85150920 -60438368 + THE1B LTR MaLR 1 363 -1 501 334 83 36 chr10 85150920 85151364 -60437924 + L2 LINE L2 2257 2734 -580 324 197 16 0 chr10 85151368 85151429 -60437859 + MER5A DNA MER1_type 125 186 -3 283 286 22 11 chr10 85151466 85151557 -60437731 - MLT1L LTR MaLR -508 107 16 221 317 17 0 chr10 85151644 85151704 -60437584 - L2 LINE L2 -6 3307 3247 1191 272 86 25 chr10 85151813 85152254 -60437034 + MLT1K LTR MaLR 110 577 -11 270 56 37 19 chr10 85152311 85152365 -60436923 + (TTTTA)n Simple_repeat Simple_repeat 2 56 0 1948 100 0 14 chr10 85152374 85152655 -60436633 - AluY SINE Alu -33 278 2 1735 156 7 3 chr10 85152658 85152953 -60436335 - AluJb SINE Alu -16 296 1 206 173 0 19 chr10 85153551 85153603 -60435685 + CT-rich Low_complexity Low_complexity 2 52 0 1639 341 74 36 chr10 85153646 85154753 -60434535 + L3 LINE CR1 400 1548 -29 562 311 107 0 chr10 85155265 85155461 -60433827 + MIR SINE MIR 2 218 -44 235 273 0 18 chr10 85155923 85155978 -60433310 - MIR SINE MIR -59 203 150 318 324 19 19 chr10 85156542 85156650 -60432638 - MIR SINE MIR -110 152 45 180 298 0 0 chr10 85156915 85156962 -60432326 - L2 LINE L2 -1 3312 3266 1529 192 83 9 chr10 85157409 85157747 -60431541 + MLT1A1 LTR MaLR 3 365 0 360 315 171 23 chr10 85157753 85157969 -60431319 + MIR SINE MIR 9 256 -6 228 216 0 91 chr10 85159347 85159435 -60429853 - MIR3 SINE MIR -20 188 109 406 245 232 0 chr10 85159930 85160105 -60429183 + L2 LINE L2 3102 3313 0 232 288 82 0 chr10 85160163 85160236 -60429052 - L2 LINE L2 -177 3095 3017 201 189 0 0 chr10 85160977 85161014 -60428274 + MIR SINE MIR 108 144 -64 532 312 45 94 chr10 85161141 85161586 -60427702 + L1ME1 LINE L1 3215 3637 -2509 2122 184 29 5 chr10 85161613 85162027 -60427261 + MSTA LTR MaLR 1 424 -4 2498 84 0 10 chr10 85162067 85162378 -60426910 + AluSq SINE Alu 1 308 -5 3473 221 55 7 chr10 85162607 85163593 -60425695 + L1ME1 LINE L1 5120 6155 -11 1552 184 91 47 chr10 85163627 85164035 -60425253 - MSTB LTR MaLR 0 426 1 201 359 39 0 chr10 85164948 85165051 -60424237 + L3 LINE CR1 1346 1452 -125 1965 291 114 39 chr10 85165134 85166479 -60422809 + L1MEc LINE L1 53 1498 -4898 218 211 295 21 chr10 85167047 85167142 -60422146 - MER5A DNA MER1_type -33 156 36 256 381 31 0 chr10 85167608 85167705 -60421583 + MIR SINE MIR 107 206 -56 285 320 108 40 chr10 85167720 85167942 -60421346 + MIR SINE MIR 20 256 -6 2692 179 10 29 chr10 85169561 85170153 -60419135 - L1MB8 LINE L1 -6 6172 5592 267 331 42 7 chr10 85170272 85170414 -60418874 + LTR67 LTR ERVL 408 554 -3 447 293 128 21 chr10 85170876 85171064 -60418224 + LTR16C LTR ERVL 284 491 0 201 74 0 0 chr10 85171672 85171699 -60417589 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 2321 93 3 3 chr10 85172119 85172421 -60416867 + AluSq SINE Alu 1 302 -11 414 267 50 50 chr10 85172545 85172706 -60416582 + LTR16C LTR ERVL 314 474 -17 195 244 104 92 chr10 85172738 85172902 -60416386 - L2 LINE L2 -191 3081 2916 391 319 123 0 chr10 85173107 85173270 -60416018 - MIR SINE MIR -15 247 65 1149 183 24 0 chr10 85173377 85173585 -60415703 + MER20 DNA MER1_type 7 219 0 711 270 103 73 chr10 85175169 85175595 -60413693 - MLT1J LTR MaLR -67 444 6 216 97 0 0 chr10 85176372 85176403 -60412885 + (TCCA)n Simple_repeat Simple_repeat 1 31 0 444 285 90 48 chr10 85176780 85177034 -60412254 - MIR SINE MIR 0 262 2 204 345 48 0 chr10 85177168 85177252 -60412036 + L2 LINE L2 3150 3237 -35 1079 274 43 58 chr10 85177342 85177856 -60411432 - MLT1J LTR MaLR -2 509 4 228 260 96 0 chr10 85178752 85178825 -60410463 - MIR SINE MIR -98 164 85 294 219 239 4 chr10 85179939 85180107 -60409181 - MIR SINE MIR -31 231 21 480 146 0 0 chr10 85180211 85180300 -60408988 + (TG)n Simple_repeat Simple_repeat 1 89 0 372 269 0 32 chr10 85180433 85180526 -60408762 - L1MC4 LINE L1 -1339 6703 6614 * 374 218 0 39 chr10 85180474 85180552 -60408736 + L1MCa LINE L1 1995 2069 -4357 324 333 0 22 chr10 85180565 85180703 -60408585 + MIR3 SINE MIR 11 145 -63 199 333 17 0 chr10 85181415 85181475 -60407813 + MIR3 SINE MIR 117 177 -31 206 256 122 11 chr10 85181481 85181571 -60407717 - MIR3 SINE MIR -12 196 97 397 325 57 22 chr10 85181669 85181897 -60407391 - MIR SINE MIR -24 238 3 262 378 14 34 chr10 85181906 85182115 -60407173 - L2 LINE L2 -90 3182 2978 275 204 194 10 chr10 85182291 85182394 -60406894 + L2 LINE L2 3150 3271 -1 874 223 99 13 chr10 85182440 85182673 -60406615 - MIR SINE MIR -3 259 7 290 269 39 29 chr10 85183315 85183419 -60405869 - MER103 DNA DNA -1 165 61 1577 238 35 28 chr10 85184077 85184510 -60404778 - LTR16A LTR ERVL 0 450 15 392 279 106 6 chr10 85185279 85185458 -60403830 + MIR SINE MIR 66 262 0 352 333 36 70 chr10 85186611 85186996 -60402292 + L2 LINE L2 2887 3258 -55 2533 102 6 6 chr10 85188813 85189177 -60400111 - THE1B LTR MaLR 0 364 1 1932 227 65 16 chr10 85189512 85190023 -60399265 + L1ME1 LINE L1 5387 5922 -244 376 60 0 0 chr10 85190023 85190073 -60399215 + MADE1 DNA Mariner 1 50 -30 449 69 42 0 chr10 85190095 85190167 -60399121 + MADE1 DNA Mariner 4 78 -2 496 279 30 40 chr10 85190168 85190425 -60398863 + L1MA10 LINE L1 5921 6332 -2 450 306 73 10 chr10 85190464 85190670 -60398618 - L1MC4 LINE L1 0 8042 7824 414 15 77 0 chr10 85190673 85190738 -60398550 + CT-rich Low_complexity Low_complexity 3 72 0 2052 137 10 3 chr10 85190743 85191043 -60398245 - AluSx SINE Alu -6 306 5 525 232 14 52 chr10 85191048 85191280 -60398008 - L1MC4 LINE L1 -105 7703 7524 830 224 78 86 chr10 85192415 85192798 -60396490 - MLT1C LTR MaLR -82 385 6 192 364 45 45 chr10 85193272 85193404 -60395884 - L2 LINE L2 0 3313 3182 257 326 126 8 chr10 85193679 85193940 -60395348 - L2 LINE L2 -434 2880 2589 270 0 0 0 chr10 85194461 85194491 -60394797 + (TG)n Simple_repeat Simple_repeat 2 31 0 598 285 72 16 chr10 85195062 85195255 -60394033 + MIR SINE MIR 3 206 -56 742 211 183 0 chr10 85195418 85195598 -60393690 - MER58A DNA MER1_type -8 216 4 204 47 47 23 chr10 85195923 85195966 -60393322 + (CAAA)n Simple_repeat Simple_repeat 3 46 0 1902 159 3 28 chr10 85198232 85198734 -60390554 + AluJo SINE Alu 1 312 0 1274 66 0 16 chr10 85198534 85198871 -60390417 + (GAAA)n Simple_repeat Simple_repeat 1 334 0 258 192 0 0 chr10 85198873 85198925 -60390363 + G-rich Low_complexity Low_complexity 4 55 0 314 320 57 0 chr10 85199156 85199278 -60390010 - MIR SINE MIR -80 182 54 194 267 22 56 chr10 85199323 85199413 -60389875 + L2 LINE L2 3143 3229 -43 376 266 95 30 chr10 85199654 85199823 -60389465 + MIR SINE MIR 77 256 -6 197 299 58 23 chr10 85199826 85199913 -60389375 + L2 LINE L2 3144 3233 -39 525 294 96 8 chr10 85201800 85202171 -60387117 + MLT1J LTR MaLR 15 421 -90 222 105 0 0 chr10 85203104 85203142 -60386146 + (TTTAG)n Simple_repeat Simple_repeat 3 40 0 244 303 30 20 chr10 85203811 85203910 -60385378 + MIR SINE MIR 108 207 -55 410 341 6 11 chr10 85204367 85204546 -60384742 - MLT1L LTR MaLR -129 486 309 240 293 142 9 chr10 85205055 85205161 -60384127 + L2 LINE L2 3153 3272 0 378 253 0 32 chr10 85205186 85205281 -60384007 + MIR SINE MIR 106 197 -65 232 304 0 0 chr10 85205879 85205948 -60383340 - MIR SINE MIR -132 130 62 234 27 27 27 chr10 85206361 85206398 -60382890 + (TTTG)n Simple_repeat Simple_repeat 4 40 0 2190 73 11 7 chr10 85206401 85206676 -60382612 - AluY SINE Alu -35 276 1 202 267 95 38 chr10 85206791 85206896 -60382392 - MIR SINE MIR -50 212 102 2889 19 0 0 chr10 85207034 85207345 -60381943 + AluY SINE Alu 1 311 0 198 279 63 9 chr10 85207426 85207537 -60381751 - L2 LINE L2 -339 2974 2858 262 186 12 35 chr10 85208134 85208306 -60380982 + (TG)n Simple_repeat Simple_repeat 2 169 0 242 183 14 0 chr10 85208746 85208817 -60380471 + (TG)n Simple_repeat Simple_repeat 1 72 0 1597 186 55 70 chr10 85209567 85210036 -60379252 - MLT1C LTR MaLR 0 467 6 1996 142 0 21 chr10 85210580 85210902 -60378386 - AluSx SINE Alu 0 316 1 246 285 91 55 chr10 85211105 85211270 -60378018 - MIR SINE MIR -15 247 77 214 250 36 0 chr10 85212179 85212235 -60377053 - MIR SINE MIR -73 135 78 328 248 77 17 chr10 85212339 85212456 -60376832 - Charlie8 DNA MER1_type -2198 219 96 283 268 43 110 chr10 85213145 85213184 -60376104 + MER117 DNA MER1_type 2 42 -155 2308 96 0 7 chr10 85213184 85213475 -60375813 + AluSq SINE Alu 1 289 -24 279 0 0 0 chr10 85213475 85213506 -60375782 + (CA)n Simple_repeat Simple_repeat 2 32 0 283 268 43 110 chr10 85213506 85213674 -60375614 + MER117 DNA MER1_type 40 196 -1 1068 152 0 35 chr10 85213768 85213789 -60375499 + AluJo SINE Alu 118 138 -174 2472 60 3 20 chr10 85213789 85214091 -60375197 + AluY SINE Alu 1 297 -14 1068 152 0 35 chr10 85214091 85214240 -60375048 + AluJo SINE Alu 138 282 -30 186 43 0 0 chr10 85214243 85214266 -60375022 + (GAAAA)n Simple_repeat Simple_repeat 3 25 0 467 253 60 35 chr10 85214513 85214735 -60374553 + L1MC/D LINE L1 5567 5800 -321 921 200 6 11 chr10 85214808 85214988 -60374300 + MER3 DNA MER1_type 3 181 -28 1802 120 101 4 chr10 85214988 85215255 -60374033 + AluSx SINE Alu 1 293 -19 735 327 157 24 chr10 85215853 85216909 -60372379 - L2 LINE L2 -767 2547 1351 184 262 202 0 chr10 85217160 85217244 -60372044 + MIR SINE MIR 70 170 -92 808 129 0 0 chr10 85217325 85217466 -60371822 + FLAM_C SINE Alu 1 141 0 852 221 58 0 chr10 85217552 85217760 -60371528 + MER58A DNA MER1_type 2 221 -3 495 317 104 28 chr10 85218115 85218547 -60370741 + MLT1L LTR MaLR 20 484 -131 313 173 0 0 chr10 85219142 85219194 -60370094 + MIR3 SINE MIR 106 157 -51 236 268 82 21 chr10 85220289 85220386 -60368902 + MIR3 SINE MIR 70 172 -36 253 366 74 21 chr10 85220875 85221118 -60368170 + MIR SINE MIR 2 257 -5 428 291 137 4 chr10 85222292 85222520 -60366768 - MIR SINE MIR -3 259 6 1166 84 24 36 chr10 85222638 85222804 -60366484 + AluSg/x SINE Alu 129 292 -18 197 289 0 0 chr10 85222927 85222972 -60366316 - L2 LINE L2 -24 3289 3245 367 253 42 10 chr10 85223370 85223508 -60365780 - MIR SINE MIR -69 139 43 186 259 56 0 chr10 85224127 85224181 -60365107 - MIR SINE MIR -98 164 108 874 301 106 15 chr10 85224262 85224847 -60364441 + L2 LINE L2 2671 3313 0 1835 123 49 28 chr10 85224864 85225168 -60364120 + AluSx SINE Alu 1 312 0 358 226 49 20 chr10 85227009 85227111 -60362177 - MIR SINE MIR -56 152 48 294 308 26 0 chr10 85227496 85227613 -60361675 - MIR3 SINE MIR -24 184 65 205 345 28 48 chr10 85227760 85227905 -60361383 + L2 LINE L2 3117 3258 -55 207 100 0 0 chr10 85227916 85227946 -60361342 + (TGAA)n Simple_repeat Simple_repeat 4 33 0 1485 218 110 16 chr10 85228389 85228656 -60360632 - MER47B DNA MER2_type -1906 417 102 1939 61 19 0 chr10 85228656 85228918 -60360370 + L1PA4 LINE L1 5883 6149 -6 1485 218 110 16 chr10 85228918 85229031 -60360257 - MER47B DNA MER2_type -2221 102 1 206 326 67 22 chr10 85229037 85229126 -60360162 + L2 LINE L2 3119 3211 -61 237 301 0 32 chr10 85229267 85229360 -60359928 + C-rich Low_complexity Low_complexity 1 90 0 525 278 77 83 chr10 85229481 85229819 -60359469 + MER102b DNA MER1_type 2 337 -4 387 0 0 0 chr10 85229922 85229965 -60359323 + (CA)n Simple_repeat Simple_repeat 2 44 0 304 333 111 12 chr10 85230368 85230539 -60358749 - MIR SINE MIR -18 244 57 222 323 52 47 chr10 85230787 85230979 -60358309 + MIR SINE MIR 49 241 -21 244 333 50 0 chr10 85231477 85231597 -60357691 - MIR3 SINE MIR -15 193 68 378 319 30 0 chr10 85231690 85231825 -60357463 - MER102b DNA MER1_type -3 338 200 4156 185 61 27 chr10 85231829 85232995 -60356293 - L1MB8 LINE L1 -6 6172 4938 2240 113 3 0 chr10 85232995 85233286 -60356002 - AluSp SINE Alu -21 292 1 4156 185 61 27 chr10 85233286 85233597 -60355691 - L1MB8 LINE L1 -1240 4938 4639 493 243 195 32 chr10 85233642 85233827 -60355461 - MER102b DNA MER1_type -124 217 3 305 251 18 55 chr10 85233830 85233969 -60355319 - MIR3 SINE MIR -49 159 22 196 293 23 83 chr10 85234877 85235010 -60354278 - MIR3 SINE MIR 0 208 84 214 293 54 27 chr10 85235052 85235199 -60354089 - MIR3 SINE MIR -12 196 46 241 360 86 41 chr10 85235546 85235860 -60353428 + L3 LINE CR1 430 757 -820 411 311 59 94 chr10 85236763 85237049 -60352239 - L2 LINE L2 -35 3237 2962 357 306 45 15 chr10 85237741 85237875 -60351413 - MIR SINE MIR -56 152 15 942 222 71 4 chr10 85238663 85238888 -60350400 + MIR SINE MIR 4 243 -19 815 161 0 12 chr10 85239027 85239189 -60350099 + MER96B DNA MER1_type? 1 160 -257 213 321 12 68 chr10 85240849 85241011 -60348277 + MIR SINE MIR 80 232 -30 190 238 0 0 chr10 85241193 85241235 -60348053 + L2 LINE L2 3255 3296 -17 235 314 13 19 chr10 85241363 85241519 -60347769 + C-rich Low_complexity Low_complexity 6 160 0 504 257 187 19 chr10 85243537 85243751 -60345537 + MIR SINE MIR 13 262 0 227 302 0 12 chr10 85243831 85243917 -60345371 + MIR SINE MIR 168 252 -10 213 250 42 62 chr10 85243932 85244028 -60345260 + L2 LINE L2 3155 3248 -24 1928 249 29 57 chr10 85244041 85244705 -60344583 + L1MC4 LINE L1 7269 7915 -127 212 59 29 0 chr10 85244705 85244739 -60344549 + (CA)n Simple_repeat Simple_repeat 2 36 0 1928 249 29 57 chr10 85244739 85244756 -60344532 + L1MC4 LINE L1 7915 7931 -111 1831 248 60 22 chr10 85244811 85244874 -60344414 - L1ME3A LINE L1 -219 5951 5892 657 69 0 0 chr10 85244874 85244961 -60344327 + (TTTC)n Simple_repeat Simple_repeat 2 88 0 2104 122 0 4 chr10 85244963 85245242 -60344046 - AluSx SINE Alu -34 278 1 1831 248 60 22 chr10 85245242 85245970 -60343318 - L1ME3A LINE L1 -278 5892 5124 238 336 64 8 chr10 85246446 85246571 -60342717 - L2 LINE L2 -216 3056 2925 234 245 0 0 chr10 85247510 85247563 -60341725 + CT-rich Low_complexity Low_complexity 2 54 0 475 254 182 6 chr10 85247609 85247774 -60341514 - MER63A DNA MER1_type -5 205 12 303 313 124 0 chr10 85248833 85248965 -60340323 + MIR SINE MIR 46 191 -41 262 313 174 9 chr10 85249608 85249723 -60339565 - MIR SINE MIR -63 145 12 2231 110 0 0 chr10 85249939 85250231 -60339057 + AluSq SINE Alu 7 298 -15 319 148 37 46 chr10 85251123 85251231 -60338057 + GA-rich Low_complexity Low_complexity 1 107 0 256 277 11 0 chr10 85251847 85252024 -60337264 + (CA)n Simple_repeat Simple_repeat 2 180 0 713 329 98 8 chr10 85253245 85253643 -60335645 + L2 LINE L2 2854 3287 -26 180 250 46 65 chr10 85253789 85253897 -60335391 - MIR SINE MIR -14 248 143 421 202 12 0 chr10 85254026 85254110 -60335178 - MIR SINE MIR -98 164 80 386 234 75 0 chr10 85254359 85254466 -60334822 + MIR SINE MIR 66 180 -82 189 0 0 0 chr10 85255764 85255785 -60333503 + (TC)n Simple_repeat Simple_repeat 1 21 0 442 247 100 40 chr10 85256454 85256604 -60332684 - MIR SINE MIR -84 178 20 312 296 67 37 chr10 85257010 85257176 -60332112 + MIR SINE MIR 19 183 -67 39910 35 1 3 chr10 85257538 85263738 -60325550 + L1PA4 LINE L1 13 6196 0 300 311 0 0 chr10 85263750 85263824 -60325464 + MLT1J LTR MaLR 105 178 -333 668 230 0 0 chr10 85263872 85264020 -60325268 + L1MA10 LINE L1 6187 6334 0 228 272 25 12 chr10 85264177 85264258 -60325030 + MLT1L LTR MaLR 519 600 -15 225 143 0 0 chr10 85264273 85264308 -60324980 + L2 LINE L2 3279 3313 0 448 236 229 14 chr10 85265565 85265705 -60323583 + MER5B DNA MER1_type 2 171 -7 931 179 5 27 chr10 85265724 85265908 -60323380 - MER5A DNA MER1_type -6 183 4 270 278 87 43 chr10 85266051 85266166 -60323122 + MIR SINE MIR 50 169 -93 212 316 0 0 chr10 85266223 85266280 -60323008 + MIR SINE MIR 42 98 -110 2738 95 36 5 chr10 85267224 85267612 -60321676 - L1PA11 LINE L1 -6 6168 5769 204 97 0 0 chr10 85267621 85267652 -60321636 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 30411 96 5 20 chr10 85267652 85273034 -60316254 - L1PA7 LINE L1 -11 6458 1162 784 83 0 0 chr10 85273032 85273128 -60316160 - L1PA7 LINE L1 -6365 96 1 * 3508 89 20 4 chr10 85273128 85273634 -60315654 - L1PA11 LINE L1 -379 5789 5276 442 252 36 9 chr10 85275582 85275693 -60313595 - MIR3 SINE MIR -4 204 91 215 288 0 15 chr10 85277386 85277452 -60311836 - L2 LINE L2 0 3313 3249 228 86 0 0 chr10 85277484 85277519 -60311769 + (TTTG)n Simple_repeat Simple_repeat 1 35 0 1905 129 4 0 chr10 85277519 85277798 -60311490 - AluSq SINE Alu -33 280 1 241 151 0 14 chr10 85277947 85277992 -60311296 + MIR SINE MIR 115 157 -105 227 303 66 57 chr10 85278164 85278286 -60311002 + MIR3 SINE MIR 81 203 -5 544 296 29 103 chr10 85278606 85278917 -60310371 - L2 LINE L2 0 3272 2985 495 234 62 14 chr10 85279485 85279630 -60309658 + MER103 DNA DNA 14 165 -1 2265 92 0 3 chr10 85279738 85280044 -60309244 + AluSg SINE Alu 1 305 -5 236 255 20 0 chr10 85280046 85280097 -60309191 - L3 LINE CR1 -24 1553 1502 220 301 70 70 chr10 85280667 85280810 -60308478 - MIR3 SINE MIR -59 149 7 796 156 19 98 chr10 85281452 85281657 -60307631 - MLT1C LTR MaLR -267 200 12 1844 142 0 21 chr10 85282208 85282530 -60306758 - AluSx SINE Alu 0 316 1 256 267 97 61 chr10 85282733 85282898 -60306390 - MIR SINE MIR -15 247 77 223 250 36 0 chr10 85283807 85283863 -60305425 - MIR SINE MIR -73 135 78 337 214 94 34 chr10 85283967 85284084 -60305204 - Charlie8 DNA MER1_type -2198 219 96 278 258 43 110 chr10 85284773 85284812 -60304476 + MER117 DNA MER1_type 2 42 -155 2156 96 0 7 chr10 85284812 85285103 -60304185 + AluSq SINE Alu 1 289 -24 279 0 0 0 chr10 85285103 85285134 -60304154 + (CA)n Simple_repeat Simple_repeat 2 32 0 278 258 43 110 chr10 85285134 85285302 -60303986 + MER117 DNA MER1_type 40 196 -1 2361 70 3 19 chr10 85285417 85285733 -60303555 + AluY SINE Alu 1 311 0 271 274 44 35 chr10 85285740 85285853 -60303435 - MIR SINE MIR -78 130 17 309 320 56 8 chr10 85286846 85286971 -60302317 - MIR SINE MIR 0 262 132 464 202 20 0 chr10 85286982 85287081 -60302207 - MER5B DNA MER1_type -71 107 7 483 190 178 37 chr10 85287094 85287257 -60302031 - MER5A DNA MER1_type 0 189 4 248 325 13 0 chr10 85287291 85287368 -60301920 + L2 LINE L2 3235 3312 -1 299 319 17 17 chr10 85287413 85287532 -60301756 + MIR SINE MIR 79 197 -65 399 239 33 33 chr10 85287537 85287717 -60301571 + L1MC5 LINE L1 7624 7803 -158 214 281 0 18 chr10 85287717 85287774 -60301514 + GA-rich Low_complexity Low_complexity 2 57 0 253 268 80 36 chr10 85288256 85288368 -60300920 - MIR SINE MIR -57 205 89 228 301 54 32 chr10 85290130 85290223 -60299065 - MIR3 SINE MIR -47 161 67 263 306 117 0 chr10 85290478 85290589 -60298699 - MIR3 SINE MIR -6 202 79 310 330 112 29 chr10 85290758 85290964 -60298324 - MIR SINE MIR -17 245 23 233 309 24 56 chr10 85291432 85291558 -60297730 + MIR SINE MIR 21 142 -66 564 314 36 24 chr10 85292180 85292428 -60296860 - MIR SINE MIR 0 262 12 382 245 0 0 chr10 85293349 85293455 -60295833 + MER113 DNA MER1_type? 70 175 -346 1452 215 48 20 chr10 85294184 85294537 -60294751 + MLT1A1 LTR MaLR 1 363 -2 206 217 22 0 chr10 85294651 85294697 -60294591 - L2 LINE L2 -16 3256 3210 * 1055 285 54 34 chr10 85294696 85295356 -60293932 + L2 LINE L2 2477 3149 -164 355 260 32 24 chr10 85295542 85295665 -60293623 - MIR SINE MIR -66 142 19 592 215 115 0 chr10 85296313 85296443 -60292845 - MER117 DNA MER1_type -36 161 17 280 282 0 0 chr10 85296465 85296536 -60292752 - MIR SINE MIR -56 152 82 180 323 172 11 chr10 85297310 85297403 -60291885 + MIR SINE MIR 20 127 -135 317 252 65 36 chr10 85297448 85297587 -60291701 - L1ME4a LINE L1 -17 6104 5962 2139 117 0 0 chr10 85297679 85297987 -60291301 + AluSg SINE Alu 1 308 -2 684 290 28 31 chr10 85298065 85298389 -60290899 - MER46C DNA MER2_type -15 323 1 766 278 67 75 chr10 85298407 85298915 -60290373 - L1ME4a LINE L1 -353 5768 5265 398 252 85 61 chr10 85299170 85299464 -60289824 - L1ME4a LINE L1 -229 5892 5592 302 328 110 35 chr10 85299687 85300212 -60289076 - L1ME LINE L1 -301 5820 5255 440 355 92 18 chr10 85300231 85300639 -60288649 - L1ME LINE L1 -912 5234 4786 279 248 168 35 chr10 85300667 85300780 -60288508 - L2 LINE L2 -788 2526 2399 247 226 34 82 chr10 85300866 85301012 -60288276 - HAL1 LINE L1 -1 2506 2368 966 86 0 0 chr10 85301195 85301346 -60287942 + (TAGA)n Simple_repeat Simple_repeat 2 152 0 1522 84 9 35 chr10 85301464 85301690 -60287598 + L1PA10 LINE L1 5945 6164 -4 703 213 0 0 chr10 85301836 85301958 -60287330 - FLAM_A SINE Alu -15 127 6 207 0 0 0 chr10 85301984 85302007 -60287281 + (A)n Simple_repeat Simple_repeat 1 23 0 1363 87 5 24 chr10 85302011 85302217 -60287071 + AluYa5 SINE Alu 110 311 0 196 234 47 31 chr10 85302221 85302271 -60287017 + L2 LINE L2 2702 2755 -559 1487 105 5 5 chr10 85302271 85302481 -60286807 + AluSg/x SINE Alu 74 283 -29 196 234 47 31 chr10 85302481 85302494 -60286794 + L2 LINE L2 2755 2766 -548 211 347 41 20 chr10 85302520 85302667 -60286621 + L2 LINE L2 2910 3059 -213 223 242 0 30 chr10 85302704 85302770 -60286518 + (CA)n Simple_repeat Simple_repeat 1 64 0 1996 171 40 0 chr10 85302770 85303098 -60286190 + MER7A DNA MER2_type 1 339 -7 219 233 0 0 chr10 85303108 85303151 -60286137 + (CA)n Simple_repeat Simple_repeat 2 44 0 186 361 60 0 chr10 85303419 85303502 -60285786 + L2 LINE L2 3199 3286 -27 262 366 99 14 chr10 85303654 85303796 -60285492 + L2 LINE L2 3115 3268 -4 1214 266 60 36 chr10 85303956 85304407 -60284881 - MLT1J LTR MaLR 0 511 45 1927 146 0 7 chr10 85304407 85304716 -60284572 + AluSx SINE Alu 1 307 -5 1214 266 60 36 chr10 85304716 85304763 -60284525 - MLT1J LTR MaLR -466 45 1 302 313 26 41 chr10 85305028 85305223 -60284065 + L2 LINE L2 3118 3309 -4 361 294 35 28 chr10 85305960 85306103 -60283185 - MLT1J2 LTR MaLR -37 413 270 637 288 46 32 chr10 85306505 85306724 -60282564 + MIR SINE MIR 7 228 -34 453 272 81 57 chr10 85307002 85307300 -60281988 - L1ME LINE L1 -307 5814 5510 271 333 22 49 chr10 85307554 85307737 -60281551 + MIR SINE MIR 83 260 -2 498 140 5 205 chr10 85308176 85308376 -60280912 + L2 LINE L2 3146 3305 -8 592 215 92 12 chr10 85308377 85308540 -60280748 - MER113 DNA MER1_type? -138 383 208 549 292 55 13 chr10 85308552 85308902 -60280386 + MLT1I LTR MaLR 1 400 -9 240 264 154 11 chr10 85309192 85309283 -60280005 + L2 LINE L2 3169 3272 0 524 337 55 0 chr10 85309324 85309523 -60279765 + MIR SINE MIR 29 238 -24 523 257 179 0 chr10 85309536 85309715 -60279573 + MIR SINE MIR 12 222 -40 353 289 119 38 chr10 85310257 85310416 -60278872 - MIR SINE MIR -7 255 84 363 281 146 34 chr10 85311169 85311347 -60277941 + L3 LINE CR1 1186 1383 -194 310 323 164 15 chr10 85311944 85312145 -60277143 + MIR SINE MIR 20 250 -12 253 271 24 24 chr10 85314452 85314537 -60274751 + MLT1L LTR MaLR 1 85 -530 189 0 0 0 chr10 85315382 85315403 -60273885 + (TGAA)n Simple_repeat Simple_repeat 1 21 0 513 183 21 35 chr10 85315713 85315855 -60273433 - LTR67 LTR ERVL -1 556 417 428 233 23 16 chr10 85316419 85316548 -60272740 + LTR67 LTR ERVL 427 556 -1 583 191 77 24 chr10 85316747 85316915 -60272373 - MER104 DNA MER2_type -3 177 1 747 288 19 39 chr10 85316922 85317179 -60272109 - MIR SINE MIR -10 252 1 213 328 0 0 chr10 85317180 85317238 -60272050 + (TG)n Simple_repeat Simple_repeat 1 58 0 434 298 126 35 chr10 85317261 85317627 -60271661 - L1MC4a LINE L1 -1878 5930 5532 262 204 139 56 chr10 85317928 85318036 -60271252 + MER103 DNA DNA 4 120 -46 518 273 105 3 chr10 85318227 85318432 -60270856 + MIR SINE MIR 11 237 -25 342 344 16 8 chr10 85318454 85318579 -60270709 + MIR3 SINE MIR 35 160 -48 217 299 31 21 chr10 85319881 85319978 -60269310 + MER5A DNA MER1_type 1 98 -91 320 311 25 17 chr10 85320488 85320607 -60268681 + MIR3 SINE MIR 8 127 -81 446 271 161 43 chr10 85320755 85321035 -60268253 - L2 LINE L2 0 3313 3001 557 291 73 39 chr10 85321227 85321433 -60267855 - MIR SINE MIR -15 247 35 344 282 77 47 chr10 85321587 85321757 -60267531 + MIR3 SINE MIR 23 197 -11 198 315 231 21 chr10 85321874 85322017 -60267271 - L2 LINE L2 0 3272 3100 423 242 105 59 chr10 85322456 85322609 -60266679 - MLT1I LTR MaLR 0 409 291 1223 171 55 6 chr10 85322718 85323079 -60266209 - MLT2B1 LTR ERVL -4 511 86 502 73 0 0 chr10 85323304 85323372 -60265916 - MLT2B1 LTR ERVL -485 69 2 426 272 174 41 chr10 85323542 85323737 -60265551 - MIR SINE MIR -26 236 16 273 89 0 0 chr10 85326045 85326090 -60263198 + (CAGT)n Simple_repeat Simple_repeat 4 48 0 252 333 72 8 chr10 85326150 85326331 -60262957 + MIR3 SINE MIR 15 247 -15 217 205 0 0 chr10 85326645 85326684 -60262604 + (ATG)n Simple_repeat Simple_repeat 3 41 0 271 271 196 46 chr10 85326973 85327124 -60262164 - MIR SINE MIR -54 208 33 208 294 0 0 chr10 85327134 85327185 -60262103 + L2 LINE L2 3210 3260 -12 203 267 0 0 chr10 85327436 85327481 -60261807 - MER91C DNA MER1_type -8 182 138 1352 231 58 21 chr10 85327813 85327943 -60261345 + Charlie4a DNA MER1_type 112 236 -1725 957 249 72 0 chr10 85327943 85328152 -60261136 - MER58A DNA MER1_type 0 224 1 1352 231 58 21 chr10 85328152 85328402 -60260886 + Charlie4a DNA MER1_type 236 506 -2 348 261 9 52 chr10 85328403 85328518 -60260770 + MIR SINE MIR 98 207 -55 361 182 34 0 chr10 85328701 85328789 -60260499 + GA-rich Low_complexity Low_complexity 1 91 0 2726 163 13 9 chr10 85329824 85330289 -60258999 + MLT1C LTR MaLR 1 467 0 494 258 109 14 chr10 85330357 85330539 -60258749 + MIR SINE MIR 2 197 -11 305 250 55 86 chr10 85331738 85331853 -60257435 - L2 LINE L2 -12 3301 3191 293 295 79 36 chr10 85331853 85331992 -60257296 + MIR3 SINE MIR 1 145 -63 322 192 301 27 chr10 85332038 85332184 -60257104 + MIR SINE MIR 76 261 -1 455 311 136 15 chr10 85332443 85332649 -60256639 + MIR SINE MIR 31 261 -1 666 335 119 46 chr10 85332782 85333051 -60256237 + L3 LINE CR1 645 893 -684 1657 193 29 0 chr10 85333051 85333326 -60255962 + AluJo SINE Alu 24 306 -6 666 335 119 46 chr10 85333326 85333552 -60255736 + L3 LINE CR1 893 1176 -401 975 316 48 19 chr10 85333559 85333973 -60255315 - LTR16A LTR ERVL -10 440 15 273 270 20 59 chr10 85333987 85334139 -60255149 - HERV16 LTR ERVL 0 4996 4851 2844 353 49 30 chr10 85334355 85336284 -60253004 - ERVL LTR ERVL -603 5161 3195 425 286 0 0 chr10 85336324 85336415 -60252873 - ERVL LTR ERVL -1932 3064 2974 1357 193 55 31 chr10 85336416 85336706 -60252582 + MSTD LTR MaLR 1 297 -99 1012 323 72 27 chr10 85336710 85337422 -60251866 - ERVL LTR ERVL -2882 2772 2029 464 225 104 100 chr10 85337517 85337748 -60251540 - ERVL LTR ERVL -3136 1860 1629 452 159 0 0 chr10 85337759 85337828 -60251460 - MER81 DNA DNA -1 113 45 1461 301 73 3 chr10 85337856 85338444 -60250844 - ERVL LTR ERVL -3447 1549 921 880 311 73 66 chr10 85338553 85339315 -60249973 - ERVL LTR ERVL -4222 774 7 504 263 108 11 chr10 85339328 85339514 -60249774 - LTR16A LTR ERVL -7 443 240 377 322 95 18 chr10 85339730 85340003 -60249285 + L3 LINE CR1 1175 1468 -109 288 0 0 0 chr10 85340780 85340812 -60248476 + (TG)n Simple_repeat Simple_repeat 1 32 0 241 312 70 0 chr10 85341369 85341526 -60247762 + L2 LINE L2 2847 3014 -258 186 43 0 0 chr10 85341588 85341611 -60247677 + (CATATA)n Simple_repeat Simple_repeat 2 24 0 231 286 0 0 chr10 85341611 85341681 -60247607 - L1MC4 LINE L1 -1337 6705 6636 677 336 36 9 chr10 85342063 85342399 -60246889 + L2 LINE L2 2458 2802 -512 220 393 0 0 chr10 85342636 85342720 -60246568 + L2 LINE L2 3182 3265 -7 531 346 46 42 chr10 85343075 85343509 -60245779 - L2 LINE L2 -5 3267 2832 1139 238 82 64 chr10 85343673 85344219 -60245069 + MLT1G LTR MaLR 35 590 0 454 257 68 79 chr10 85344365 85344657 -60244631 - MLT1L LTR MaLR -192 423 135 2369 234 33 19 chr10 85344774 85345445 -60243843 - L1ME1 LINE L1 -5 6161 5482 282 234 189 18 chr10 85345591 85345702 -60243586 - MIR SINE MIR -55 207 78 2186 103 0 14 chr10 85345747 85346074 -60243214 - AluSc SINE Alu 0 309 1 208 331 123 20 chr10 85346311 85346562 -60242726 - L2 LINE L2 -340 2974 2698 370 310 148 55 chr10 85346714 85347349 -60241939 - L2 LINE L2 -1055 2259 1566 318 320 69 29 chr10 85347354 85348075 -60241213 + L1MC/D LINE L1 3223 3972 -2174 401 284 83 18 chr10 85348203 85348372 -60240916 + MLT1H LTR MaLR 29 208 -341 355 296 106 31 chr10 85348673 85349126 -60240162 + L1MC/D LINE L1 4132 4618 -1528 1115 277 70 46 chr10 85349262 85349804 -60239484 + LTR67 LTR ERVL 3 557 0 441 239 138 8 chr10 85349869 85349999 -60239289 - MIR SINE MIR -10 252 106 246 284 84 0 chr10 85350053 85350148 -60239140 + L1P LINE L1 4902 5004 -1142 1418 156 19 53 chr10 85350392 85350505 -60238783 + AluJo SINE Alu 29 144 -168 2339 98 0 0 chr10 85350505 85350800 -60238488 + AluSc SINE Alu 1 295 -14 1418 156 19 53 chr10 85350800 85350949 -60238339 + AluJo SINE Alu 144 282 -30 186 43 0 0 chr10 85350952 85350975 -60238313 + (GAAAA)n Simple_repeat Simple_repeat 3 25 0 486 243 60 35 chr10 85351222 85351444 -60237844 + L1MC/D LINE L1 5567 5800 -321 912 200 6 11 chr10 85351517 85351697 -60237591 + MER3 DNA MER1_type 3 181 -28 1794 120 101 4 chr10 85351697 85351964 -60237324 + AluSx SINE Alu 1 293 -19 905 321 156 28 chr10 85352548 85353618 -60235670 - L2 LINE L2 -757 2557 1351 201 262 202 0 chr10 85353869 85353953 -60235335 + MIR SINE MIR 70 170 -92 864 129 0 0 chr10 85354034 85354175 -60235113 + FLAM_C SINE Alu 1 141 0 293 344 8 16 chr10 85354831 85354953 -60234335 - MIR SINE MIR -71 137 17 1025 160 0 0 chr10 85355051 85355207 -60234081 - FRAM SINE Alu -9 167 12 192 340 68 58 chr10 85355553 85355656 -60233632 - L2 LINE L2 0 3272 3169 207 137 20 59 chr10 85355731 85355782 -60233506 + L2 LINE L2 3007 3055 -217 183 80 0 0 chr10 85355932 85355957 -60233331 + (TGAA)n Simple_repeat Simple_repeat 2 26 0 23 0 0 0 chr10 85357342 85357365 -60231923 + AT_rich Low_complexity Low_complexity 1 23 0 207 319 0 0 chr10 85357643 85357715 -60231573 + L2 LINE L2 3200 3271 -1 181 357 10 61 chr10 85357909 85358007 -60231281 - MIR SINE MIR -64 144 52 21 36 0 0 chr10 85358257 85358285 -60231003 + AT_rich Low_complexity Low_complexity 1 28 0 322 292 42 83 chr10 85358586 85358676 -60230612 + MIR SINE MIR 9 92 -170 2356 101 7 0 chr10 85358676 85358983 -60230305 - AluY SINE Alu -2 309 1 322 292 42 83 chr10 85358983 85359036 -60230252 + MIR SINE MIR 92 146 -116 712 287 27 34 chr10 85359080 85359290 -60229998 - MIR SINE MIR -47 215 10 281 253 44 0 chr10 85359493 85359584 -60229704 - L1MC4a LINE L1 -1844 5964 5870 * 2780 231 66 23 chr10 85359571 85360430 -60228858 - L1MD2 LINE L1 -16 6343 5448 2065 162 39 30 chr10 85360430 85360978 -60228310 + MLT2A2 LTR ERVL 1 554 0 299 310 12 23 chr10 85360997 85361168 -60228120 - L1MC4a LINE L1 -1917 5891 5723 360 273 68 74 chr10 85361275 85361586 -60227702 - MLT1K LTR MaLR -2 586 278 318 115 0 0 chr10 85361654 85361706 -60227582 + (TTAGGG)n Simple_repeat Simple_repeat 4 55 0 420 238 0 87 chr10 85364245 85364371 -60224917 - L2 LINE L2 0 3313 3199 2385 91 0 10 chr10 85364383 85364692 -60224596 - AluSg SINE Alu -4 306 1 2122 110 27 3 chr10 85364900 85365192 -60224096 - AluSq SINE Alu -14 299 1 897 239 14 19 chr10 85365462 85365671 -60223617 + L1MD2 LINE L1 37 244 -6152 * 2678 279 61 27 chr10 85365665 85367014 -60222274 + L1MD2 LINE L1 519 1913 -4483 3858 234 40 49 chr10 85367119 85367315 -60221973 + L1MD2 LINE L1 4722 4918 -1510 2361 113 0 0 chr10 85367315 85367617 -60221671 - AluSg SINE Alu -8 302 1 3858 234 40 49 chr10 85367617 85367716 -60221572 + L1MD2 LINE L1 4918 5016 -1412 225 0 0 0 chr10 85367716 85367741 -60221547 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 3858 234 40 49 chr10 85367741 85369171 -60220117 + L1MD2 LINE L1 5016 6428 0 2283 230 66 6 chr10 85369159 85369986 -60219302 + L1ME1 LINE L1 2156 2993 -3222 * 2287 248 44 17 chr10 85370036 85370858 -60218430 + L1ME1 LINE L1 3742 4585 -1630 * 2489 217 28 38 chr10 85370825 85371327 -60217961 + L1ME1 LINE L1 5379 5885 -518 2128 116 17 7 chr10 85371327 85371620 -60217668 + AluSp SINE Alu 1 296 -17 2489 217 28 38 chr10 85371620 85372012 -60217276 + L1ME1 LINE L1 5885 6402 -1 272 318 9 28 chr10 85372185 85372292 -60216996 - MER91C DNA MER1_type -35 105 1 2120 246 58 70 chr10 85372319 85372892 -60216396 + HAL1b LINE L1 74 630 -718 1213 298 64 16 chr10 85372892 85373379 -60215909 + MLT1J LTR MaLR 2 511 0 2120 246 58 70 chr10 85373379 85373861 -60215427 + HAL1b LINE L1 630 1116 -232 358 211 53 21 chr10 85373930 85374025 -60215263 + HAL1b LINE L1 1244 1341 -7 235 266 105 16 chr10 85374387 85374511 -60214777 - L1MC/D LINE L1 -2270 5538 5404 245 308 27 22 chr10 85374559 85374744 -60214544 - L1MC/D LINE L1 -813 5333 5148 2052 154 3 6 chr10 85374858 85375170 -60214118 - AluSx SINE Alu -1 311 1 211 257 100 14 chr10 85375647 85375717 -60213571 + L2 LINE L2 3150 3225 -47 229 278 24 95 chr10 85377120 85377246 -60212042 + MIR SINE MIR 16 132 -76 282 323 0 0 chr10 85377575 85377668 -60211620 + L2 LINE L2 3180 3272 0 823 147 0 33 chr10 85377668 85377852 -60211436 + (TGGA)n Simple_repeat Simple_repeat 2 179 0 999 181 17 0 chr10 85378196 85378373 -60210915 - MER5A DNA MER1_type -4 185 6 199 250 62 0 chr10 85378797 85378861 -60210427 + MIR SINE MIR 55 122 -86 192 77 0 0 chr10 85379234 85379260 -60210028 + (A)n Simple_repeat Simple_repeat 1 26 0 244 219 42 104 chr10 85379635 85379731 -60209557 - MIR SINE MIR -75 187 98 295 292 247 7 chr10 85380343 85380497 -60208791 - MIR SINE MIR -19 243 53 265 338 93 44 chr10 85380792 85381135 -60208153 - L2 LINE L2 -96 3176 2817 664 161 181 0 chr10 85381652 85381801 -60207487 + MER3 DNA MER1_type 1 129 -80 320 152 15 0 chr10 85381828 85381894 -60207394 + GA-rich Low_complexity Low_complexity 1 67 0 271 268 73 24 chr10 85382045 85382168 -60207120 - MIR3 SINE MIR -15 193 65 186 103 0 0 chr10 85382288 85382317 -60206971 + (TCCC)n Simple_repeat Simple_repeat 2 30 0 30 0 0 0 chr10 85382594 85382624 -60206664 + AT_rich Low_complexity Low_complexity 1 30 0 559 252 155 0 chr10 85382970 85383125 -60206163 + MER5A DNA MER1_type 11 189 0 316 307 16 0 chr10 85383272 85383399 -60205889 + MER103 DNA DNA 19 147 -19 368 248 76 71 chr10 85383854 85384052 -60205236 - MIR SINE MIR -30 232 34 2831 91 0 21 chr10 85384241 85384624 -60204664 + THE1C LTR MaLR 1 375 0 263 324 58 36 chr10 85384650 85384789 -60204499 - MIR SINE MIR -37 225 84 213 195 0 0 chr10 85385648 85385689 -60203599 + MIR SINE MIR 81 121 -87 341 244 56 44 chr10 85386105 85386265 -60203023 + L1MC4a LINE L1 5844 6005 -1803 205 161 0 0 chr10 85386454 85386485 -60202803 + (CAGA)n Simple_repeat Simple_repeat 1 31 0 184 133 89 22 chr10 85387124 85387169 -60202119 + MIR SINE MIR 91 138 -70 260 305 120 30 chr10 85387460 85387693 -60201595 + L2 LINE L2 2245 2498 -816 195 139 0 0 chr10 85387765 85387801 -60201487 + (CACCAT)n Simple_repeat Simple_repeat 6 41 0 309 347 89 45 chr10 85388204 85388518 -60200770 + L3 LINE CR1 430 757 -820 372 315 51 106 chr10 85389424 85389716 -60199572 - L2 LINE L2 -35 3237 2962 224 328 55 95 chr10 85389751 85390077 -60199211 - L2 LINE L2 -50 3222 2910 397 256 30 53 chr10 85390409 85390542 -60198746 - MIR SINE MIR -112 150 21 285 230 0 0 chr10 85393201 85393275 -60196013 + (CAT)n Simple_repeat Simple_repeat 2 75 0 236 274 153 42 chr10 85393556 85393771 -60195517 + L2 LINE L2 2805 3043 -229 300 230 27 0 chr10 85394362 85394436 -60194852 - L2 LINE L2 0 3313 3238 198 265 82 71 chr10 85394625 85394723 -60194565 + MIR SINE MIR 23 121 -141 211 309 13 39 chr10 85395826 85395880 -60193408 + CT-rich Low_complexity Low_complexity 1 55 -467 2172 127 3 3 chr10 85395880 85396187 -60193101 - AluSx SINE Alu -5 307 1 211 309 13 39 chr10 85396187 85396362 -60192926 + CT-rich Low_complexity Low_complexity 55 522 0 284 189 0 11 chr10 85396374 85396464 -60192824 + CT-rich Low_complexity Low_complexity 2 90 0 311 94 0 19 chr10 85396561 85396614 -60192674 + (TG)n Simple_repeat Simple_repeat 2 53 0 303 249 21 77 chr10 85396834 85396992 -60192296 - MIR SINE MIR -53 209 69 270 250 36 48 chr10 85398137 85398221 -60191067 + L3 LINE CR1 1426 1508 -69 * 334 314 91 39 chr10 85398208 85398615 -60190673 + L2 LINE L2 2454 2881 -433 481 157 10 10 chr10 85398638 85398740 -60190548 + CT-rich Low_complexity Low_complexity 2 103 0 635 328 16 0 chr10 85399749 85399941 -60189347 - MIR SINE MIR -16 246 52 231 244 118 108 chr10 85400207 85400427 -60188861 + MIR SINE MIR 18 247 -15 449 274 74 11 chr10 85400909 85401084 -60188204 - MIR3 SINE MIR -22 186 1 279 274 99 70 chr10 85401272 85401504 -60187784 + MIR SINE MIR 2 243 -19 228 297 14 97 chr10 85401682 85401827 -60187461 + MIR3 SINE MIR 13 145 -63 233 183 25 0 chr10 85401857 85401919 -60187369 + MIR SINE MIR 83 147 -62 246 341 95 8 chr10 85402660 85402786 -60186502 + L2 LINE L2 3136 3272 0 184 219 58 102 chr10 85402902 85403039 -60186249 - L2 LINE L2 -411 2903 2773 190 331 16 33 chr10 85403840 85403961 -60185327 + L2 LINE L2 2993 3111 -161 629 246 40 6 chr10 85404223 85404398 -60184890 - MER5A DNA MER1_type -4 185 5 903 265 67 0 chr10 85405668 85405891 -60183397 - MIR SINE MIR -16 246 9 393 304 45 0 chr10 85406224 85406336 -60182952 + MIR3 SINE MIR 49 165 -43 346 289 33 16 chr10 85406781 85406902 -60182386 + MER117 DNA MER1_type 35 157 -40 215 277 31 31 chr10 85406926 85406991 -60182297 - MIR SINE MIR -59 149 85 309 352 40 8 chr10 85407345 85407470 -60181818 - MIR SINE MIR -101 161 33 264 30 0 0 chr10 85407517 85407550 -60181738 + (CATTC)n Simple_repeat Simple_repeat 3 35 0 298 312 64 50 chr10 85408037 85408184 -60181104 + MIR SINE MIR 14 151 -61 411 271 123 6 chr10 85408653 85408823 -60180465 + MIR SINE MIR 18 207 -55 181 266 202 27 chr10 85408856 85409044 -60180244 + L2 LINE L2 2664 2884 -430 1224 280 39 58 chr10 85409402 85410149 -60179139 - L1MC4a LINE L1 -750 5396 5221 189 0 0 0 chr10 85410271 85410292 -60178996 + (TGAA)n Simple_repeat Simple_repeat 3 23 0 419 338 111 14 chr10 85410948 85411155 -60178133 - MIR SINE MIR -23 239 13 207 302 18 6 chr10 85411406 85411575 -60177713 + (CAGGG)n Simple_repeat Simple_repeat 4 174 0 225 363 12 0 chr10 85411739 85411819 -60177469 - L2 LINE L2 -5 3267 3187 261 293 122 64 chr10 85412229 85412287 -60177001 + L2 LINE L2 3101 3154 -159 324 218 13 0 chr10 85412287 85412365 -60176923 - MER116 DNA Mariner 0 80 2 2248 93 0 0 chr10 85412372 85412697 -60176591 - AluSg1 SINE Alu 0 325 1 261 293 122 64 chr10 85412697 85412817 -60176471 + L2 LINE L2 3159 3299 -14 221 200 40 20 chr10 85412866 85412916 -60176372 + L2 LINE L2 3173 3223 -90 271 363 65 6 chr10 85412956 85413124 -60176164 + MIR SINE MIR 73 250 -12 191 333 58 13 chr10 85413275 85413431 -60175857 + MIR3 SINE MIR 22 184 -24 1910 164 0 20 chr10 85413466 85413771 -60175517 + AluJo SINE Alu 1 299 -13 401 340 21 13 chr10 85414525 85414678 -60174610 - MIR SINE MIR -50 158 30 193 281 16 0 chr10 85415497 85415561 -60173727 - L2 LINE L2 -67 3246 3182 1307 171 33 0 chr10 85415767 85415977 -60173311 - MER20 DNA MER1_type 0 219 3 283 372 75 27 chr10 85416186 85416374 -60172914 + MIR SINE MIR 56 252 -10 423 244 17 34 chr10 85417184 85417303 -60171985 + MIR3 SINE MIR 79 195 -13 331 352 58 24 chr10 85418036 85418417 -60170871 + L2 LINE L2 2666 3058 -214 184 289 19 0 chr10 85418565 85418617 -60170671 + L2 LINE L2 3258 3310 -3 352 222 111 0 chr10 85421468 85421594 -60167694 + L1MD1 LINE L1 6103 6242 0 238 366 72 31 chr10 85421722 85422256 -60167032 + L2 LINE L2 2539 3096 -176 490 325 32 6 chr10 85423323 85423480 -60165808 - L3 LINE CR1 -3 1574 1414 224 189 14 0 chr10 85423994 85424068 -60165220 + GA-rich Low_complexity Low_complexity 2 76 0 209 350 12 0 chr10 85424585 85424665 -60164623 + L2 LINE L2 2248 2328 -986 543 125 98 0 chr10 85426057 85426169 -60163119 - MLT1D LTR MaLR -298 207 85 250 221 173 10 chr10 85427411 85427515 -60161773 + MIR3 SINE MIR 62 182 -26 928 274 102 40 chr10 85428223 85428653 -60160635 + LTR16A1 LTR ERVL 1 457 0 1835 171 0 13 chr10 85429384 85429694 -60159594 + AluSx SINE Alu 1 306 -6 289 206 10 108 chr10 85430627 85430680 -60158608 - MER69A DNA AcHobo -2349 177 137 2464 63 0 0 chr10 85430680 85430979 -60158309 - AluY SINE Alu -12 299 1 289 206 10 108 chr10 85430979 85431027 -60158261 - MER69A DNA AcHobo -2389 137 86 277 211 53 53 chr10 85431058 85431153 -60158135 - MER69A DNA AcHobo -73 104 10 305 213 64 11 chr10 85431160 85431254 -60158034 - MLT1J2 LTR MaLR -283 167 69 202 264 0 46 chr10 85432674 85432755 -60156533 + MIR3 SINE MIR 103 179 -29 281 250 36 48 chr10 85433292 85433376 -60155912 - MIR SINE MIR -70 192 110 270 363 111 0 chr10 85433912 85434047 -60155241 - MIR SINE MIR -79 183 34 572 287 45 10 chr10 85434083 85434285 -60155003 - MIR SINE MIR -18 244 36 334 343 92 51 chr10 85434259 85434844 -60154444 + L2 LINE L2 2665 3272 0 * 434 165 0 18 chr10 85434844 85434953 -60154335 + (TGGA)n Simple_repeat Simple_repeat 2 108 0 1180 268 76 16 chr10 85436391 85436772 -60152516 - MLT1I LTR MaLR -4 405 2 256 282 68 10 chr10 85437388 85437491 -60151797 - MIR SINE MIR -117 145 37 214 301 36 0 chr10 85437760 85437843 -60151445 + MIR SINE MIR 60 145 -63 215 229 0 21 chr10 85439466 85439514 -60149774 + GA-rich Low_complexity Low_complexity 5 51 0 211 287 115 23 chr10 85439530 85439617 -60149671 - MIR SINE MIR -66 196 102 441 275 124 11 chr10 85440349 85440527 -60148761 + MIR SINE MIR 10 207 -55 544 184 55 0 chr10 85440633 85440742 -60148546 + L1MB5 LINE L1 6059 6173 -1 204 250 0 0 chr10 85440979 85441023 -60148265 + L2 LINE L2 3268 3311 -2 354 291 64 7 chr10 85441509 85441650 -60147638 + MIR SINE MIR 14 162 -100 187 211 141 28 chr10 85441934 85442005 -60147283 - MIR SINE MIR -68 140 62 290 263 181 0 chr10 85442016 85442139 -60147149 + MIR SINE MIR 19 163 -63 685 350 136 13 chr10 85442260 85443183 -60146105 + L2 LINE L2 2229 3313 0 245 354 42 0 chr10 85443268 85443364 -60145924 + L2 LINE L2 3160 3259 -13 426 219 11 17 chr10 85443967 85444145 -60145143 + (TGGA)n Simple_repeat Simple_repeat 1 177 0 252 219 83 62 chr10 85444204 85444300 -60144988 - L2 LINE L2 -17 3296 3199 261 0 0 0 chr10 85444959 85444988 -60144300 + (TTG)n Simple_repeat Simple_repeat 2 30 0 302 225 0 14 chr10 85445760 85445831 -60143457 - MIR3 SINE MIR -35 173 104 995 221 12 8 chr10 85446294 85446534 -60142754 - MLT1D LTR MaLR -3 502 262 183 244 0 22 chr10 85446698 85446743 -60142545 - MIR SINE MIR -133 75 32 244 305 12 12 chr10 85447036 85447118 -60142170 - L3 LINE CR1 -96 1481 1400 273 273 86 70 chr10 85447387 85447515 -60141773 + MIR3 SINE MIR 54 183 -25 199 330 98 9 chr10 85448264 85448376 -60140912 + L2 LINE L2 2929 3050 -222 803 155 7 0 chr10 85448528 85448683 -60140605 + (TGGA)n Simple_repeat Simple_repeat 4 159 0 310 269 128 32 chr10 85449338 85449494 -60139794 + MIR SINE MIR 25 195 -13 656 272 22 2 chr10 85449914 85450085 -60139203 + MER5B DNA MER1_type 4 189 0 222 332 53 30 chr10 85450135 85450341 -60138947 - MIR SINE MIR -45 217 9 484 286 32 48 chr10 85450915 85451104 -60138184 + MIR SINE MIR 6 191 -71 578 307 21 37 chr10 85451110 85451299 -60137989 + MIR SINE MIR 75 260 -2 448 341 179 10 chr10 85451784 85452483 -60136805 - L2 LINE L2 0 3313 2482 422 293 43 49 chr10 85453213 85453377 -60135911 + MIR SINE MIR 26 188 -74 185 330 110 0 chr10 85453377 85453477 -60135811 + L2 LINE L2 2982 3092 -180 191 333 69 0 chr10 85453509 85453581 -60135707 + L2 LINE L2 3194 3270 -2 217 379 63 0 chr10 85453872 85453967 -60135321 - MIR3 SINE MIR -27 181 81 852 233 119 13 chr10 85454625 85454861 -60134427 - MIR SINE MIR 0 262 2 245 329 35 0 chr10 85455349 85455434 -60133854 + MIR3 SINE MIR 99 186 -22 378 196 28 48 chr10 85456076 85456184 -60133104 + MIR SINE MIR 39 154 -54 260 269 92 67 chr10 85456819 85456938 -60132350 - MIR SINE MIR -40 222 101 580 365 21 48 chr10 85457542 85457874 -60131414 - L2 LINE L2 -2 3270 2948 316 343 49 14 chr10 85457897 85458040 -60131248 - MIR SINE MIR -64 198 51 279 250 92 83 chr10 85458714 85458834 -60130454 - MIR SINE MIR -41 221 101 391 276 82 0 chr10 85459767 85459901 -60129387 + MER117 DNA MER1_type 14 158 -39 422 319 92 15 chr10 85460425 85460685 -60128603 + L2 LINE L2 3034 3313 0 776 316 68 50 chr10 85460837 85460928 -60128360 - Charlie8 DNA MER1_type -1893 524 436 2269 104 0 3 chr10 85460928 85461236 -60128052 + AluSx SINE Alu 1 307 -5 776 316 68 50 chr10 85461236 85461393 -60127895 - Charlie8 DNA MER1_type -1981 436 283 1057 172 16 31 chr10 85461393 85461585 -60127703 + MER5A DNA MER1_type 1 189 0 776 316 68 50 chr10 85461585 85461820 -60127468 - Charlie8 DNA MER1_type -2134 283 31 1068 160 70 30 chr10 85461821 85462021 -60127267 + AluJo SINE Alu 87 294 -18 491 308 14 46 chr10 85462356 85462614 -60126674 - MIR SINE MIR -14 248 3 28 48 0 0 chr10 85465239 85465281 -60124007 + GC_rich Low_complexity Low_complexity 1 42 0 252 59 0 0 chr10 85465351 85465385 -60123903 + (CCCGG)n Simple_repeat Simple_repeat 2 35 0 208 93 70 0 chr10 85465827 85465870 -60123418 + CT-rich Low_complexity Low_complexity 1 46 0 853 241 53 4 chr10 85466333 85466561 -60122727 - MIR SINE MIR -21 241 3 230 336 35 26 chr10 85466722 85466838 -60122450 + MIR SINE MIR 140 256 -6 362 232 92 137 chr10 85467028 85467312 -60121976 + L2 LINE L2 3043 3313 0 962 128 0 0 chr10 85467737 85467870 -60121418 - FLAM_C SINE Alu 0 133 1 675 345 105 21 chr10 85468874 85469618 -60119670 + L2 LINE L2 1938 2743 -571 378 314 29 0 chr10 85469753 85469890 -60119398 + L2 LINE L2 2919 3059 -213 2125 58 69 4 chr10 85469960 85470237 -60119051 + AluSq SINE Alu 7 301 -12 2130 115 0 0 chr10 85470468 85470763 -60118525 + AluSx SINE Alu 1 295 -17 279 353 43 0 chr10 85471011 85471127 -60118161 + MIR3 SINE MIR 11 131 -77 200 295 15 123 chr10 85471997 85472258 -60117030 + L2 LINE L2 2851 3083 -189 238 327 49 56 chr10 85472379 85472541 -60116747 - MIR SINE MIR -70 192 32 193 260 78 52 chr10 85472618 85472695 -60116593 + L2 LINE L2 3204 3282 -31 831 188 74 6 chr10 85473843 85474019 -60115269 - MER53 DNA DNA -1 188 1 1913 276 65 8 chr10 85474131 85474656 -60114632 - MLT1H1 LTR MaLR 0 555 1 497 263 31 31 chr10 85474817 85474977 -60114311 + L2 LINE L2 3150 3309 -4 194 396 65 0 chr10 85475095 85475234 -60114054 + L2 LINE L2 2897 3044 -228 200 245 38 0 chr10 85475679 85475732 -60113556 - L2 LINE L2 -95 3218 3164 2164 105 0 0 chr10 85476069 85476363 -60112925 + AluSx SINE Alu 5 298 -14 258 359 27 33 chr10 85476407 85476591 -60112697 - MIR SINE MIR -66 196 14 267 333 19 0 chr10 85477624 85477729 -60111559 + L1MC4 LINE L1 7777 7883 -159 468 222 10 0 chr10 85477789 85477888 -60111400 - MER5A DNA MER1_type -80 109 10 941 123 105 12 chr10 85478035 85478206 -60111082 + L1MB8 LINE L1 5992 6178 0 333 295 160 2 chr10 85479037 85479155 -60110133 + MIR SINE MIR 30 163 -62 206 242 65 0 chr10 85479316 85479378 -60109910 + MIR SINE MIR 118 183 -79 728 234 80 5 chr10 85479593 85479781 -60109507 + MIR SINE MIR 22 223 -39 441 311 65 42 chr10 85479832 85480138 -60109150 - L2 LINE L2 -43 3270 2958 1187 256 184 35 chr10 85480574 85481035 -60108253 - MLT1G1 LTR MaLR 0 595 66 3677 210 41 27 chr10 85481041 85481090 -60108198 + L1ME1 LINE L1 4282 4329 -1837 1940 119 61 0 chr10 85481090 85481384 -60107904 - AluJb SINE Alu 0 312 1 3677 210 41 27 chr10 85481384 85482065 -60107223 + L1ME1 LINE L1 4329 4999 -1167 1963 122 0 20 chr10 85482065 85482368 -60106920 + AluSx SINE Alu 1 297 -15 3677 210 41 27 chr10 85482368 85483040 -60106248 + L1ME1 LINE L1 4999 5705 -461 917 122 0 0 chr10 85483042 85483173 -60106115 - FLAM_C SINE Alu -6 137 7 1368 252 88 11 chr10 85483174 85483607 -60105681 + L1ME1 LINE L1 5697 6162 -4 261 214 18 0 chr10 85483976 85484032 -60105256 + MIR SINE MIR 90 146 -62 307 300 47 42 chr10 85484236 85484426 -60104862 - L3 LINE CR1 -16 1561 1371 212 258 31 86 chr10 85484496 85484624 -60104664 - MER5B DNA MER1_type -56 122 2 411 220 291 0 chr10 85484627 85484768 -60104520 + MER5A DNA MER1_type 8 189 0 438 244 67 122 chr10 85485715 85485985 -60103303 - MER112 DNA MER1_type 0 260 6 793 177 85 0 chr10 85486161 85486277 -60103011 + AluJo SINE Alu 5 136 -176 248 0 31 0 chr10 85486277 85486309 -60102979 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 793 177 85 0 chr10 85486309 85486333 -60102955 + AluJo SINE Alu 136 157 -155 906 129 0 7 chr10 85486445 85486585 -60102703 + AluJo SINE Alu 165 303 -9 413 262 74 25 chr10 85487091 85487292 -60101996 - MIR SINE MIR -36 172 2 287 244 0 2 chr10 85489274 85489344 -60099944 - MIR SINE MIR -66 142 73 200 264 97 0 chr10 85490390 85490462 -60098826 - L3 LINE CR1 -125 1452 1374 204 200 0 0 chr10 85490499 85490544 -60098744 + (CA)n Simple_repeat Simple_repeat 1 45 0 230 281 10 73 chr10 85491101 85491197 -60098091 - L2 LINE L2 -16 3256 3167 344 288 14 55 chr10 85491866 85492012 -60097276 - MIR SINE MIR -55 207 68 243 271 93 28 chr10 85492738 85492845 -60096443 + L2 LINE L2 2945 3058 -214 1730 143 24 3 chr10 85493384 85493694 -60095594 + AluJo SINE Alu 20 335 0 670 241 55 63 chr10 85493933 85494170 -60095118 + MIR SINE MIR 7 241 -21 281 57 0 0 chr10 85494251 85494286 -60095002 - MLT1F1 LTR MaLR -463 104 70 2358 90 0 0 chr10 85494382 85494692 -60094596 + AluSx SINE Alu 1 310 -2 249 220 17 0 chr10 85495566 85495625 -60093663 + MIR SINE MIR 93 152 -56 483 252 7 46 chr10 85495634 85495785 -60093503 - MIR SINE MIR -14 248 104 834 235 25 0 chr10 85495970 85496170 -60093118 - MIR SINE MIR -49 213 9 219 300 55 36 chr10 85497649 85497759 -60091529 - MIR SINE MIR -76 132 21 21 36 0 0 chr10 85498670 85498698 -60090590 + AT_rich Low_complexity Low_complexity 1 28 0 239 192 77 0 chr10 85498706 85498758 -60090530 - MER103 DNA DNA -105 61 6 252 324 76 9 chr10 85499337 85499442 -60089846 - MIR SINE MIR -109 153 42 195 303 79 0 chr10 85499531 85499620 -60089668 + MIR SINE MIR 53 148 -114 262 256 49 12 chr10 85499863 85499945 -60089343 + MIR3 SINE MIR 109 193 -15 770 278 26 17 chr10 85500109 85500339 -60088949 - MIR SINE MIR -18 244 13 2121 92 0 0 chr10 85501346 85501619 -60087669 + AluSq SINE Alu 6 278 -35 221 0 35 0 chr10 85501622 85501651 -60087637 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 239 265 167 10 chr10 85501653 85501755 -60087533 + MIR SINE MIR 64 181 -81 409 240 104 0 chr10 85501756 85501881 -60087407 - MER96 DNA MER1_type? -1 174 37 228 169 185 31 chr10 85501890 85501955 -60087333 + MIR SINE MIR 179 253 -9 195 100 0 0 chr10 85501961 85501991 -60087297 + (CAT)n Simple_repeat Simple_repeat 3 32 0 213 267 53 0 chr10 85502087 85502162 -60087126 + MIR SINE MIR 73 151 -57 632 305 30 4 chr10 85502590 85502823 -60086465 - LTR33 LTR ERVL -54 467 229 1451 216 202 28 chr10 85502893 85503398 -60085890 + MLT1G1 LTR MaLR 1 593 -2 477 275 7 40 chr10 85503402 85503551 -60085737 - LTR33 LTR ERVL -377 144 1 2179 103 7 3 chr10 85503644 85503944 -60085344 + AluSq SINE Alu 4 304 -9 521 293 35 20 chr10 85504752 85504950 -60084338 - MIR SINE MIR -41 221 21 236 374 65 0 chr10 85504919 85505042 -60084246 + L2 LINE L2 3133 3263 -9 * 215 263 12 30 chr10 85505312 85505429 -60083859 - MIR SINE MIR -61 147 78 277 265 37 22 chr10 85505985 85506094 -60083194 + MIR SINE MIR 68 145 -63 367 342 42 42 chr10 85507307 85507567 -60081721 - L2 LINE L2 -28 3244 2985 343 297 10 0 chr10 85507964 85508065 -60081223 - MIR3 SINE MIR -21 187 86 408 193 128 28 chr10 85508424 85508533 -60080755 - MIR SINE MIR -79 183 64 1813 104 90 0 chr10 85508539 85508842 -60080446 - AluSp SINE Alu 0 327 1 927 121 8 0 chr10 85508846 85508978 -60080310 - FLAM_C SINE Alu -10 133 1 1038 207 118 55 chr10 85509230 85509626 -60079662 - MLT1G LTR MaLR 0 555 111 316 98 0 0 chr10 85509627 85509668 -60079620 - Alu SINE Alu -260 41 1 199 413 40 0 chr10 85509929 85510055 -60079233 + MIR SINE MIR 78 208 -54 279 319 97 53 chr10 85510395 85510621 -60078667 - L3 LINE CR1 -28 1549 1314 276 338 179 30 chr10 85510647 85510848 -60078440 + MIR SINE MIR 20 250 -12 264 137 0 0 chr10 85511098 85511149 -60078139 + (TGGA)n Simple_repeat Simple_repeat 2 52 0 658 236 97 0 chr10 85511254 85511419 -60077869 - MER5A DNA MER1_type 0 189 9 214 184 0 0 chr10 85511825 85511863 -60077425 + (CA)n Simple_repeat Simple_repeat 1 38 0 368 301 10 0 chr10 85511957 85512070 -60077218 + MIR3 SINE MIR 46 160 -48 228 233 111 22 chr10 85512137 85512227 -60077061 - L2 LINE L2 -15 3298 3201 299 304 27 36 chr10 85512231 85512343 -60076945 - MIR SINE MIR -36 226 116 2152 128 0 0 chr10 85512345 85512651 -60076637 + AluSx SINE Alu 1 306 -6 1345 232 45 40 chr10 85513673 85514100 -60075188 + Charlie1b DNA MER1_type 95 523 0 187 311 238 0 chr10 85514826 85514948 -60074340 - MIR3 SINE MIR -17 191 41 315 192 39 58 chr10 85515318 85515422 -60073866 - MIR SINE MIR -62 146 45 237 331 169 11 chr10 85515913 85516097 -60073191 + L2 LINE L2 3058 3270 -2 202 217 0 0 chr10 85516690 85516736 -60072552 + (CA)n Simple_repeat Simple_repeat 1 46 0 268 273 28 28 chr10 85517087 85517263 -60072025 + (CA)n Simple_repeat Simple_repeat 1 176 0 311 182 25 19 chr10 85517344 85517503 -60071785 + (CA)n Simple_repeat Simple_repeat 1 160 0 270 0 0 0 chr10 85517555 85517585 -60071703 + (CA)n Simple_repeat Simple_repeat 2 31 0 226 308 14 7 chr10 85517654 85517800 -60071488 + (CA)n Simple_repeat Simple_repeat 2 148 0 227 387 45 0 chr10 85518284 85518395 -60070893 - MIR SINE MIR -63 145 30 387 0 0 0 chr10 85518401 85518444 -60070844 + (CCAA)n Simple_repeat Simple_repeat 4 46 0 198 350 42 35 chr10 85519685 85519828 -60069460 - MIR SINE MIR -17 245 102 216 365 54 24 chr10 85520275 85520442 -60068846 - MIR3 SINE MIR -7 201 30 1887 122 3 52 chr10 85520510 85520837 -60068451 - AluJo SINE Alu -1 311 1 394 265 7 22 chr10 85520837 85520973 -60068315 + CT-rich Low_complexity Low_complexity 2 135 0 1932 204 47 49 chr10 85521057 85521563 -60067725 + MLT1D LTR MaLR 1 505 0 263 243 43 0 chr10 85521965 85522035 -60067253 + MIR SINE MIR 77 149 -113 255 31 109 16 chr10 85522149 85522213 -60067075 + GA-rich Low_complexity Low_complexity 6 75 0 21 0 0 0 chr10 85522499 85522520 -60066768 + AT_rich Low_complexity Low_complexity 1 21 0 292 311 33 0 chr10 85522851 85522941 -60066347 + MIR SINE MIR 109 201 -61 618 253 32 6 chr10 85523214 85523372 -60065916 + MLT1H1 LTR MaLR 1 162 -393 1666 162 7 42 chr10 85523382 85523691 -60065597 - AluJo SINE Alu -12 300 3 907 136 7 0 chr10 85523694 85523841 -60065447 + Tigger7 DNA MER2_type 2340 2487 0 381 326 183 22 chr10 85524137 85525232 -60064056 + L2 LINE L2 2036 3313 0 855 207 11 2 chr10 85525413 85525622 -60063666 + L1ME1 LINE L1 5795 5980 -186 669 140 0 37 chr10 85525638 85525745 -60063543 - AluJb SINE Alu -15 297 195 326 289 29 0 chr10 85525880 85525984 -60063304 + MIR3 SINE MIR 54 160 -48 228 233 111 22 chr10 85526051 85526141 -60063147 - L2 LINE L2 -15 3298 3201 299 304 27 36 chr10 85526145 85526257 -60063031 - MIR SINE MIR -36 226 116 2152 128 0 0 chr10 85526259 85526565 -60062723 + AluSx SINE Alu 1 306 -6 1355 229 45 40 chr10 85527587 85528014 -60061274 + Charlie1b DNA MER1_type 95 523 0 187 311 238 0 chr10 85528745 85528867 -60060421 - MIR3 SINE MIR -17 191 41 315 192 39 58 chr10 85529237 85529341 -60059947 - MIR SINE MIR -62 146 45 237 331 169 11 chr10 85529832 85530016 -60059272 + L2 LINE L2 3058 3270 -2 202 217 0 0 chr10 85530609 85530655 -60058633 + (CA)n Simple_repeat Simple_repeat 1 46 0 268 273 28 28 chr10 85531006 85531182 -60058106 + (CA)n Simple_repeat Simple_repeat 1 176 0 311 182 25 19 chr10 85531263 85531422 -60057866 + (CA)n Simple_repeat Simple_repeat 1 160 0 270 0 0 0 chr10 85531474 85531504 -60057784 + (CA)n Simple_repeat Simple_repeat 2 31 0 217 247 24 12 chr10 85531573 85531658 -60057630 + (CA)n Simple_repeat Simple_repeat 2 87 0 227 387 45 0 chr10 85532204 85532315 -60056973 - MIR SINE MIR -63 145 30 387 0 0 0 chr10 85532321 85532364 -60056924 + (CCAA)n Simple_repeat Simple_repeat 4 46 0 198 350 42 35 chr10 85533605 85533748 -60055540 - MIR SINE MIR -17 245 102 216 365 54 24 chr10 85534195 85534362 -60054926 - MIR3 SINE MIR -7 201 30 1872 122 3 55 chr10 85534430 85534757 -60054531 - AluJo SINE Alu -2 310 1 394 265 7 22 chr10 85534757 85534893 -60054395 + CT-rich Low_complexity Low_complexity 2 135 0 1932 204 47 49 chr10 85534977 85535483 -60053805 + MLT1D LTR MaLR 1 505 0 263 243 43 0 chr10 85535885 85535955 -60053333 + MIR SINE MIR 77 149 -113 255 31 109 16 chr10 85536069 85536133 -60053155 + GA-rich Low_complexity Low_complexity 6 75 0 21 0 0 0 chr10 85536419 85536440 -60052848 + AT_rich Low_complexity Low_complexity 1 21 0 292 311 33 0 chr10 85536771 85536861 -60052427 + MIR SINE MIR 109 201 -61 598 255 138 67 chr10 85537134 85537302 -60051986 + MLT1G1 LTR MaLR 1 156 -411 1517 170 10 43 chr10 85537302 85537602 -60051686 - AluJo SINE Alu -12 300 11 598 255 138 67 chr10 85537602 85537808 -60051480 + MLT1G1 LTR MaLR 156 404 -163 2449 167 81 75 chr10 85537898 85538186 -60051102 + MER44D DNA MER2_type 48 333 -2254 1243 144 45 27 chr10 85538186 85538287 -60051001 - MER30 DNA MER1_type -2 228 130 2385 87 3 0 chr10 85538287 85538599 -60050689 + AluSp SINE Alu 1 313 0 1243 144 45 27 chr10 85538599 85538719 -60050569 - MER30 DNA MER1_type -100 130 3 2449 167 81 75 chr10 85538719 85538933 -60050355 + MER44D DNA MER2_type 333 557 -2030 2072 131 3 0 chr10 85538933 85539238 -60050050 - AluSx SINE Alu -4 308 3 2449 167 81 75 chr10 85539238 85539388 -60049900 + MER44D DNA MER2_type 557 705 0 411 329 182 21 chr10 85539684 85540778 -60048510 + L2 LINE L2 2036 3313 0 829 191 6 0 chr10 85540959 85541132 -60048156 + L1ME1 LINE L1 5795 5968 -198 577 265 25 56 chr10 85541134 85541184 -60048104 - MLT1F1 LTR MaLR -350 217 167 1760 157 3 30 chr10 85541184 85541489 -60047799 - AluJb SINE Alu -15 297 1 577 265 25 56 chr10 85541489 85541634 -60047654 - MLT1F1 LTR MaLR -400 167 28 2088 120 0 16 chr10 85541652 85541969 -60047319 - AluSx SINE Alu 0 312 1 522 241 35 7 chr10 85542168 85542313 -60046975 + MIR SINE MIR 68 216 -46 251 291 8 26 chr10 85542330 85542447 -60046841 + MIR SINE MIR 147 261 -1 1313 161 12 35 chr10 85542585 85542839 -60046449 - AluJo SINE Alu -64 248 1 198 71 0 0 chr10 85543029 85543057 -60046231 + (TAAAAA)n Simple_repeat Simple_repeat 2 29 0 1398 275 149 19 chr10 85543076 85543941 -60045347 + L1ME1 LINE L1 154 1131 -5265 479 224 13 33 chr10 85543943 85544095 -60045193 + L1ME1 LINE L1 2970 3118 -3097 2868 181 40 20 chr10 85544099 85544177 -60045111 + MER68 LTR ERV1 1 76 -486 1399 193 66 86 chr10 85544177 85544618 -60044670 + MSTB1 LTR MaLR 1 432 0 2868 181 40 20 chr10 85544618 85545090 -60044198 + MER68 LTR ERV1 76 562 0 1199 280 64 19 chr10 85545119 85545445 -60043843 + L1ME1 LINE L1 3158 3525 -2690 2185 102 0 0 chr10 85545445 85545753 -60043535 + AluSx SINE Alu 1 308 0 1199 280 64 19 chr10 85545753 85546017 -60043271 + L1ME1 LINE L1 3525 3776 -2439 1042 226 33 24 chr10 85546006 85546342 -60042946 + L1ME1 LINE L1 4656 4994 -1221 * 1328 192 20 4 chr10 85546340 85546595 -60042693 + L1MCa LINE L1 4 262 -6164 * 3820 142 83 32 chr10 85546592 85548055 -60041233 + L1MCa LINE L1 778 2397 -4029 2889 227 108 14 chr10 85548040 85549191 -60040097 + L1ME1 LINE L1 4975 6229 -6 * 238 250 16 0 chr10 85549313 85549377 -60039911 + MIR SINE MIR 41 105 -103 255 368 28 0 chr10 85549504 85549648 -60039640 - L2 LINE L2 -208 3064 2917 207 337 11 22 chr10 85549994 85550086 -60039202 - MIR SINE MIR -110 152 62 364 220 70 0 chr10 85550131 85550231 -60039057 - MIR SINE MIR -66 142 36 273 326 29 0 chr10 85550671 85550787 -60038501 + MIR SINE MIR 40 157 -62 1664 160 3 52 chr10 85551461 85551786 -60037502 + AluSx SINE Alu 1 309 -3 331 272 76 0 chr10 85553046 85553138 -60036150 - MIR SINE MIR -116 146 48 198 274 48 0 chr10 85554076 85554138 -60035150 + MIR SINE MIR 61 125 -83 283 167 20 186 chr10 85554267 85554369 -60034919 - MER81 DNA DNA -28 86 2 2157 82 3 30 chr10 85554965 85555270 -60034018 + AluSg SINE Alu 1 297 -13 291 297 1 0 chr10 85555559 85555646 -60033642 + MIR SINE MIR 61 147 -62 4117 189 27 18 chr10 85555646 85556425 -60032863 - MER21B LTR ERV1 -77 786 1 255 356 22 15 chr10 85558486 85558621 -60030667 - MIR SINE MIR -125 137 2 296 143 18 0 chr10 85558980 85559036 -60030252 + (TG)n Simple_repeat Simple_repeat 2 58 0 186 246 92 0 chr10 85559495 85559560 -60029728 + L2 LINE L2 3185 3255 -17 184 291 182 6 chr10 85560084 85560249 -60029039 - L2 LINE L2 -222 3091 2898 1655 181 3 13 chr10 85560495 85560794 -60028494 + AluJo SINE Alu 1 296 -16 2033 117 13 3 chr10 85560858 85561157 -60028131 + AluSx SINE Alu 1 302 -10 220 271 144 8 chr10 85561528 85561646 -60027642 + MIR SINE MIR 18 151 -57 271 306 198 0 chr10 85561709 85561820 -60027468 + MIR SINE MIR 124 256 -6 182 355 40 8 chr10 85561851 85561975 -60027313 + MIR SINE MIR 18 145 -63 455 259 91 56 chr10 85562990 85563187 -60026101 + MIR SINE MIR 39 242 -20 761 268 77 0 chr10 85564168 85564403 -60024885 + MIR SINE MIR 10 262 0 541 289 29 1 chr10 85564531 85564707 -60024581 - MIR SINE MIR -62 146 3 232 254 42 14 chr10 85564898 85564969 -60024319 + L2 LINE L2 3198 3270 -2 226 269 0 0 chr10 85564969 85565021 -60024267 + GA-rich Low_complexity Low_complexity 3 54 0 399 346 17 75 chr10 85565120 85565254 -60024034 + L3 LINE CR1 1293 1402 -175 777 157 52 140 chr10 85565254 85565483 -60023805 - MER63A DNA MER1_type -1 209 1 399 346 17 75 chr10 85565483 85565643 -60023645 + L3 LINE CR1 1402 1570 -7 269 275 25 12 chr10 85565775 85565855 -60023433 - MIR SINE MIR -97 111 31 259 322 195 8 chr10 85565918 85566036 -60023252 + L2 LINE L2 3174 3313 0 354 297 74 10 chr10 85566144 85566314 -60022974 + MIR SINE MIR 31 212 -50 213 39 0 0 chr10 85567193 85567219 -60022069 + (TTTC)n Simple_repeat Simple_repeat 3 28 0 220 228 13 63 chr10 85567367 85567446 -60021842 + MIR SINE MIR 43 117 -91 2203 87 27 7 chr10 85567535 85567834 -60021454 + AluY SINE Alu 1 305 -6 427 286 156 7 chr10 85568040 85568194 -60021094 + MIR SINE MIR 73 249 -13 277 190 35 0 chr10 85568691 85568749 -60020539 - AluSp SINE Alu -110 193 134 248 298 43 21 chr10 85568749 85568843 -60020445 + MIR SINE MIR 46 141 -67 335 347 74 11 chr10 85569064 85569240 -60020048 - MIR3 SINE MIR 0 208 22 292 207 19 116 chr10 85569727 85569787 -60019501 + MIR SINE MIR 31 78 -130 1924 171 0 3 chr10 85569787 85570096 -60019192 - AluJb SINE Alu -4 308 1 292 207 19 116 chr10 85570096 85570158 -60019130 + MIR SINE MIR 78 144 -64 191 362 0 14 chr10 85570816 85570885 -60018403 - MIR SINE MIR -138 124 57 225 301 115 77 chr10 85570938 85571094 -60018194 + MIR SINE MIR 88 249 -13 219 320 26 0 chr10 85572236 85572314 -60016974 + L3 LINE CR1 1422 1501 -76 24 91 0 0 chr10 85572475 85572541 -60016747 + GC_rich Low_complexity Low_complexity 1 66 0 1351 164 14 47 chr10 85572689 85572964 -60016324 - MER21B LTR ERV1 -597 266 1 339 303 34 105 chr10 85573831 85574098 -60015190 - L1M2 LINE L1 -4947 1594 1229 233 264 0 33 chr10 85575432 85575523 -60013765 + GA-rich Low_complexity Low_complexity 4 91 0 24 0 0 0 chr10 85575547 85575571 -60013717 + GC_rich Low_complexity Low_complexity 1 24 0 291 253 0 33 chr10 85576715 85576806 -60012482 + GA-rich Low_complexity Low_complexity 4 91 0 25 31 0 0 chr10 85576821 85576853 -60012435 + GC_rich Low_complexity Low_complexity 1 32 0 300 206 27 0 chr10 85577047 85577120 -60012168 + (CGGG)n Simple_repeat Simple_repeat 3 77 0 21 57 0 0 chr10 85577400 85577435 -60011853 + GC_rich Low_complexity Low_complexity 1 35 0 25 31 0 0 chr10 85577452 85577484 -60011804 + GC_rich Low_complexity Low_complexity 1 32 0 211 202 0 56 chr10 85578088 85578177 -60011111 + G-rich Low_complexity Low_complexity 5 88 0 201 39 0 0 chr10 85578842 85578868 -60010420 + (TCCC)n Simple_repeat Simple_repeat 1 26 0 296 305 42 42 chr10 85581143 85581261 -60008027 + MIR SINE MIR 67 184 -78 382 279 166 22 chr10 85581332 85581561 -60007727 - L3 LINE CR1 0 1577 1316 193 229 43 57 chr10 85581937 85582007 -60007281 - L2 LINE L2 -90 3182 3114 343 262 146 41 chr10 85582092 85582277 -60007011 - MIR SINE MIR -50 212 8 465 337 17 7 chr10 85583213 85583403 -60005885 - MIR3 SINE MIR 0 208 13 255 253 0 0 chr10 85583569 85583648 -60005640 + (CA)n Simple_repeat Simple_repeat 1 79 0 285 341 62 16 chr10 85584126 85584255 -60005033 - MIR3 SINE MIR -46 162 28 1906 163 0 10 chr10 85584563 85584876 -60004412 + AluSg SINE Alu 1 310 0 383 317 8 8 chr10 85585344 85585464 -60003824 - MIR3 SINE MIR -11 197 78 567 209 128 104 chr10 85585657 85585868 -60003420 + MIR SINE MIR 39 254 -8 180 291 0 63 chr10 85586183 85586262 -60003026 + MIR SINE MIR 119 192 -70 291 270 45 0 chr10 85586320 85586409 -60002879 + MIR3 SINE MIR 75 167 -41 1358 169 97 18 chr10 85586580 85586858 -60002430 - AluJb SINE Alu -12 300 1 290 289 30 0 chr10 85587557 85587666 -60001622 - MIR3 SINE MIR -49 159 43 2292 94 0 7 chr10 85588310 85588618 -60000670 - AluSx SINE Alu -6 306 1 283 318 171 23 chr10 85588971 85589270 -60000018 - L3 LINE CR1 -28 1549 1207 451 285 112 17 chr10 85589892 85590071 -59999217 - MIR3 SINE MIR -9 199 4 185 291 27 73 chr10 85590487 85590597 -59998691 - MIR3 SINE MIR 0 208 104 1783 249 42 15 chr10 85590990 85591762 -59997526 - L2 LINE L2 0 3313 2521 339 355 96 12 chr10 85591999 85592250 -59997038 + L2 LINE L2 2811 3082 -190 240 298 109 22 chr10 85592540 85592659 -59996629 + MIR3 SINE MIR 73 201 -7 232 294 0 15 chr10 85592661 85592729 -59996559 + MIR SINE MIR 69 135 -73 215 223 38 84 chr10 85593521 85593617 -59995671 + MIR SINE MIR 85 150 -58 1132 144 44 44 chr10 85594509 85594738 -59994550 - AluJo SINE Alu 0 312 84 326 312 48 54 chr10 85594745 85594931 -59994357 - L1M2 LINE L1 -4770 2079 1895 601 288 40 0 chr10 85595156 85595333 -59993955 + MER91B DNA MER1_type 2 185 -5 332 247 97 0 chr10 85596901 85596994 -59992294 - MIR SINE MIR -82 180 79 218 291 58 48 chr10 85598124 85598227 -59991061 - MIR3 SINE MIR -14 194 91 22 35 0 0 chr10 85599229 85599258 -59990030 + AT_rich Low_complexity Low_complexity 1 29 0 214 326 14 95 chr10 85599425 85599710 -59989578 - L2 LINE L2 -78 3194 2933 283 369 87 0 chr10 85600345 85600448 -59988840 + MIR SINE MIR 29 140 -68 369 0 0 0 chr10 85601145 85601186 -59988102 + (CA)n Simple_repeat Simple_repeat 2 42 0 374 328 80 46 chr10 85601187 85601293 -59987995 - MIR SINE MIR -13 249 148 2131 107 3 0 chr10 85601293 85601636 -59987652 - AluSx SINE Alu 0 312 1 374 328 80 46 chr10 85601636 85601767 -59987521 - MIR SINE MIR -114 148 4 274 311 189 24 chr10 85602391 85602555 -59986733 + MIR SINE MIR 6 196 -66 221 370 20 0 chr10 85602582 85602682 -59986606 + MIR3 SINE MIR 59 160 -48 1905 164 0 19 chr10 85602682 85602993 -59986295 + AluJb SINE Alu 7 311 -1 509 265 165 15 chr10 85603075 85603275 -59986013 + MIR SINE MIR 20 249 -13 2286 53 0 7 chr10 85604238 85604549 -59984739 + AluY SINE Alu 1 309 0 447 321 160 19 chr10 85604709 85605083 -59984205 - L2 LINE L2 -25 3288 2862 983 245 55 24 chr10 85606331 85606584 -59982704 + MIR SINE MIR 2 262 0 231 385 13 3 chr10 85606633 85606739 -59982549 - MIR SINE MIR -85 123 13 251 320 31 23 chr10 85608197 85608325 -59980963 - L2 LINE L2 -168 3104 2976 812 141 39 0 chr10 85608334 85608462 -59980826 + FLAM_C SINE Alu 1 133 0 210 293 86 71 chr10 85608495 85608635 -59980653 - L2 LINE L2 -464 2850 2709 193 286 48 0 chr10 85608890 85608953 -59980335 + MER5A DNA MER1_type 39 104 -85 331 288 29 41 chr10 85609279 85609449 -59979839 - L2 LINE L2 -233 3039 2872 185 228 0 35 chr10 85609920 85609977 -59979311 - MIR SINE MIR -77 131 77 573 335 144 14 chr10 85610863 85611230 -59978058 - L2 LINE L2 0 3313 2899 205 279 59 0 chr10 85612146 85612214 -59977074 + MIR3 SINE MIR 104 175 -33 263 314 36 64 chr10 85612392 85612532 -59976756 + MIR SINE MIR 39 174 -88 396 0 0 0 chr10 85612960 85613004 -59976284 + (TG)n Simple_repeat Simple_repeat 2 45 0 361 254 36 0 chr10 85613296 85613406 -59975882 + MIR3 SINE MIR 9 122 -86 654 252 108 14 chr10 85613602 85613880 -59975408 - MER113 DNA MER1_type? -196 325 22 327 286 98 8 chr10 85614324 85614457 -59974831 + MER117 DNA MER1_type 14 158 -39 361 354 7 14 chr10 85615071 85615215 -59974073 - MIR3 SINE MIR -52 156 14 464 269 134 0 chr10 85615272 85615443 -59973845 + MIR SINE MIR 5 198 -64 236 327 94 25 chr10 85616237 85616396 -59972892 - MIR3 SINE MIR -21 187 18 424 295 58 19 chr10 85617706 85617862 -59971426 + MIR SINE MIR 32 193 -69 282 283 20 40 chr10 85617882 85617981 -59971307 + MIR SINE MIR 96 192 -70 499 290 41 65 chr10 85618077 85618322 -59970966 + MIR SINE MIR 24 262 0 186 241 0 35 chr10 85619792 85619850 -59969438 + L3b LINE CR1 1325 1380 -203 192 191 294 66 chr10 85620546 85620682 -59968606 - MIR3 SINE MIR -17 191 25 243 333 11 73 chr10 85621631 85621808 -59967480 + L2 LINE L2 2928 3093 -179 705 45 0 0 chr10 85622466 85622555 -59966733 + (TG)n Simple_repeat Simple_repeat 1 89 0 287 288 51 68 chr10 85622928 85623105 -59966183 - MER5A DNA MER1_type 0 189 16 328 300 46 31 chr10 85623145 85623275 -59966013 - L3 LINE CR1 -96 1481 1350 209 282 100 45 chr10 85623621 85623731 -59965557 - MIR3 SINE MIR -39 169 54 549 301 47 0 chr10 85624687 85624880 -59964408 - L1ME3A LINE L1 -9 6161 5960 409 226 89 8 chr10 85624888 85625072 -59964216 - MLT1H LTR MaLR -6 548 337 490 240 36 41 chr10 85625153 85625344 -59963944 - MLT1H LTR MaLR -315 234 1 1049 255 81 16 chr10 85625346 85625718 -59963570 - L1ME3A LINE L1 -213 5957 5562 317 198 91 9 chr10 85626072 85626183 -59963105 + MIR SINE MIR 42 166 -64 545 271 60 56 chr10 85627377 85627616 -59961672 - MIR SINE MIR -21 241 3 279 376 49 12 chr10 85628568 85628730 -59960558 + MIR SINE MIR 82 249 -13 375 367 7 0 chr10 85629066 85629205 -59960083 - MIR SINE MIR -120 142 3 372 228 165 8 chr10 85629205 85629301 -59959987 - MIR SINE MIR -90 172 57 290 314 44 7 chr10 85629761 85629898 -59959390 - L2 LINE L2 -214 3058 2917 568 197 178 13 chr10 85629962 85630114 -59959174 - MER45A DNA AcHobo -1 177 1 219 283 0 91 chr10 85630135 85630234 -59959054 + MIR SINE MIR 34 123 -85 200 297 72 63 chr10 85630661 85630772 -59958516 - MIR SINE MIR -40 222 111 491 269 102 6 chr10 85631302 85631469 -59957819 + MIR SINE MIR 59 241 -21 456 281 9 0 chr10 85632162 85632276 -59957012 + MIR3 SINE MIR 46 160 -48 493 254 79 12 chr10 85632308 85632473 -59956815 - MIR SINE MIR -85 177 2 185 246 35 18 chr10 85632532 85632589 -59956699 - L2 LINE L2 -22 3291 3234 377 222 22 11 chr10 85633772 85633862 -59955426 - MIR3 SINE MIR -29 179 89 394 269 154 6 chr10 85634410 85634566 -59954722 - L2 LINE L2 -172 3100 2922 192 274 0 55 chr10 85634680 85634753 -59954535 + MIR SINE MIR 67 135 -73 222 275 69 69 chr10 85635601 85635732 -59953556 - MIR3 SINE MIR -65 143 13 227 279 302 0 chr10 85636387 85636516 -59952772 + MIR SINE MIR 20 187 -75 612 287 58 0 chr10 85636862 85637050 -59952238 + MIR SINE MIR 64 262 0 352 346 37 7 chr10 85637118 85637254 -59952034 - MIR SINE MIR -14 248 109 456 248 67 0 chr10 85637292 85637397 -59951891 - MER81 DNA DNA 0 114 3 727 300 46 4 chr10 85638618 85638855 -59950433 + MIR SINE MIR 2 248 -14 244 333 34 48 chr10 85640614 85640761 -59948527 - MIR3 SINE MIR -49 159 15 198 287 117 43 chr10 85641124 85641312 -59947976 + L2 LINE L2 2857 3058 -214 278 277 124 0 chr10 85642246 85642413 -59946875 - MIR SINE MIR -16 192 1 2012 89 43 0 chr10 85642848 85643128 -59946160 - AluSq SINE Alu -19 294 3 204 344 0 16 chr10 85643761 85643825 -59945463 + MIR3 SINE MIR 109 171 -37 277 219 62 0 chr10 85644177 85644241 -59945047 + MIR3 SINE MIR 88 155 -53 556 201 201 0 chr10 85644623 85644777 -59944511 + MIR SINE MIR 38 222 -40 377 155 250 0 chr10 85645039 85645155 -59944133 + MER69 DNA AcHobo 2382 2526 0 303 247 13 13 chr10 85648327 85648404 -59940884 - MIR SINE MIR -109 153 77 371 230 24 6 chr10 85648553 85648718 -59940570 + (TCCA)n Simple_repeat Simple_repeat 4 171 0 199 297 31 0 chr10 85648725 85648789 -59940499 - L2 LINE L2 -1 3312 3247 1368 161 5 0 chr10 85648789 85649007 -59940281 - AluJb SINE Alu -5 307 89 633 354 145 5 chr10 85649215 85649493 -59939795 - L2 LINE L2 0 3313 3076 1493 158 0 0 chr10 85649493 85649721 -59939567 - AluJb SINE Alu -84 228 1 633 354 145 5 chr10 85649721 85649889 -59939399 - L2 LINE L2 -237 3076 2804 * 1456 319 31 8 chr10 85649883 85650494 -59938794 - L2 LINE L2 -648 2666 2042 217 354 23 39 chr10 85650496 85650626 -59938662 - L2 LINE L2 -258 3014 2887 268 303 67 0 chr10 85651237 85651326 -59937962 + MIR SINE MIR 31 125 -137 229 266 0 31 chr10 85651466 85651530 -59937758 + L2 LINE L2 3005 3066 -206 * 242 366 71 29 chr10 85651526 85651876 -59937412 - L2 LINE L2 -10 3262 2898 274 302 124 8 chr10 85652233 85652362 -59936926 - MIR SINE MIR -113 149 6 455 263 59 0 chr10 85652412 85652530 -59936758 - MIR SINE MIR -62 146 22 374 330 18 9 chr10 85652981 85653236 -59936052 + CT-rich Low_complexity Low_complexity 1 257 0 433 255 92 21 chr10 85653450 85653591 -59935697 + MIR SINE MIR 15 165 -97 202 265 0 0 chr10 85653667 85653716 -59935572 + MIR SINE MIR 164 212 -50 1609 192 38 3 chr10 85653748 85654035 -59935253 - AluJb SINE Alu -15 297 1 320 62 0 21 chr10 85654953 85655001 -59934287 + (TG)n Simple_repeat Simple_repeat 2 48 0 218 234 62 16 chr10 85655512 85655576 -59933712 - L2 LINE L2 -3 3310 3244 195 277 0 0 chr10 85656729 85656776 -59932512 - L3 LINE CR1 -107 1470 1424 202 143 29 0 chr10 85657164 85657199 -59932089 + (TCTCTG)n Simple_repeat Simple_repeat 1 36 0 366 303 77 13 chr10 85658514 85658669 -59930619 + MIR3 SINE MIR 1 165 -43 208 289 100 0 chr10 85659235 85659325 -59929963 + MIR SINE MIR 85 183 -79 268 288 61 32 chr10 85660040 85660184 -59929104 + MIR3 SINE MIR 11 158 -50 242 267 142 0 chr10 85660185 85660242 -59929046 + MER5B DNA MER1_type 1 49 -129 2026 154 0 3 chr10 85660242 85660553 -59928735 + AluJb SINE Alu 1 310 -2 242 267 142 0 chr10 85660553 85660615 -59928673 + MER5B DNA MER1_type 49 137 -41 467 252 99 7 chr10 85660670 85660821 -59928467 + MIR SINE MIR 8 172 -90 300 288 68 30 chr10 85661703 85661835 -59927453 - MIR SINE MIR -59 149 12 456 194 97 24 chr10 85663000 85663124 -59926164 - MIR SINE MIR -70 192 60 224 200 86 14 chr10 85664197 85664267 -59925021 - MIR SINE MIR -86 176 102 196 333 109 52 chr10 85664937 85665111 -59924177 - L2 LINE L2 -93 3179 2996 180 325 149 0 chr10 85665172 85665286 -59924002 + MIR SINE MIR 61 191 -71 315 0 0 0 chr10 85665394 85665429 -59923859 + (TG)n Simple_repeat Simple_repeat 1 35 0 253 254 0 0 chr10 85666422 85666477 -59922811 - MIR SINE MIR -77 131 77 289 303 110 65 chr10 85667532 85667687 -59921601 + MIR SINE MIR 34 195 -67 349 296 30 37 chr10 85667750 85667885 -59921403 + MIR SINE MIR 7 140 -122 401 304 22 43 chr10 85668123 85668261 -59921027 + MIR3 SINE MIR 35 169 -39 485 327 23 41 chr10 85668463 85668683 -59920605 - MIR SINE MIR -38 224 9 201 410 35 7 chr10 85668858 85669002 -59920286 - MIR3 SINE MIR -30 178 31 337 308 150 23 chr10 85669183 85669595 -59919693 + L2 LINE L2 2561 3043 -229 314 318 72 46 chr10 85669731 85669926 -59919362 - MIR SINE MIR -7 255 56 299 234 279 27 chr10 85670601 85670712 -59918576 + MIR SINE MIR 28 166 -96 423 284 16 8 chr10 85671348 85671475 -59917813 + MIR SINE MIR 57 184 -78 234 286 248 25 chr10 85671514 85671675 -59917613 - MIR SINE MIR -19 243 47 263 306 24 24 chr10 85672240 85672325 -59916963 + MIR SINE MIR 61 145 -63 315 0 0 0 chr10 85672429 85672464 -59916824 + (TGAG)n Simple_repeat Simple_repeat 1 35 0 253 221 0 140 chr10 85672689 85672825 -59916463 + L3 LINE CR1 1377 1493 -84 237 191 0 32 chr10 85673466 85673529 -59915759 + (TG)n Simple_repeat Simple_repeat 1 61 0 486 0 0 0 chr10 85673972 85674026 -59915262 + (TG)n Simple_repeat Simple_repeat 1 54 0 238 91 45 0 chr10 85675310 85675354 -59913934 - Charlie5 DNA MER1_type -206 2406 2361 193 219 24 0 chr10 85675410 85675451 -59913837 - MIR SINE MIR -64 144 103 245 253 40 0 chr10 85676632 85676707 -59912581 + MER117 DNA MER1_type 46 123 -74 194 349 0 0 chr10 85677560 85677623 -59911665 - L3 LINE CR1 -87 1490 1428 426 289 60 36 chr10 85677662 85677828 -59911460 + MIR SINE MIR 3 172 -90 438 356 23 28 chr10 85678048 85678225 -59911063 - MER5A DNA MER1_type 0 189 14 212 269 86 11 chr10 85678258 85678351 -59910937 + MIR3 SINE MIR 98 197 -11 232 171 0 0 chr10 85678757 85678798 -59910490 - MIR SINE MIR -59 149 109 272 274 77 81 chr10 85679519 85679767 -59909521 - L2 LINE L2 0 3272 3026 183 367 0 0 chr10 85679975 85680035 -59909253 + L2 LINE L2 3249 3308 -5 488 298 76 2 chr10 85680500 85680678 -59908610 - MIR SINE MIR -62 146 7 1589 96 55 5 chr10 85681205 85681424 -59907864 - MER30 DNA MER1_type 0 230 1 184 313 83 21 chr10 85681589 85681685 -59907603 - MIR SINE MIR -160 102 1 363 311 0 87 chr10 85681753 85681914 -59907374 - MIR SINE MIR -101 161 15 429 20 0 0 chr10 85683599 85683649 -59905639 + (TG)n Simple_repeat Simple_repeat 1 50 0 352 328 48 0 chr10 85684297 85684422 -59904866 - L2 LINE L2 0 3313 3183 342 299 39 16 chr10 85684783 85684910 -59904378 + MIR3 SINE MIR 34 163 -45 382 285 49 7 chr10 85685782 85685926 -59903362 - L1ME4a LINE L1 0 6121 5972 285 310 60 17 chr10 85687274 85687390 -59901898 + L2 LINE L2 3143 3263 -9 207 246 127 14 chr10 85687399 85687493 -59901795 - MIR SINE MIR -93 115 18 294 234 21 75 chr10 85688970 85689064 -59900224 - MIR3 SINE MIR -52 156 68 184 205 26 0 chr10 85689583 85689622 -59899666 + MER5B DNA MER1_type 102 141 -37 290 318 26 9 chr10 85690210 85690325 -59898963 - MIR3 SINE MIR -48 160 37 275 264 22 22 chr10 85690710 85690801 -59898487 + MIR SINE MIR 3 93 -169 288 77 0 0 chr10 85691369 85691408 -59897880 + (CA)n Simple_repeat Simple_repeat 1 39 0 647 354 28 8 chr10 85691587 85691841 -59897447 + MIR SINE MIR 3 261 -1 512 239 69 19 chr10 85691863 85692022 -59897266 + MIR SINE MIR 17 183 -79 560 271 108 37 chr10 85692349 85692563 -59896725 + MIR SINE MIR 22 250 -12 230 394 0 0 chr10 85695171 85695265 -59894023 - MIR3 SINE MIR -15 193 100 575 300 40 31 chr10 85695334 85695557 -59893731 + MIR SINE MIR 2 226 -36 217 299 93 9 chr10 85695621 85695728 -59893560 - MIR3 SINE MIR -47 161 46 391 311 105 11 chr10 85695937 85696127 -59893161 + MIR SINE MIR 28 235 -27 648 211 79 47 chr10 85697474 85697664 -59891624 - MIR SINE MIR -65 197 2 329 279 38 63 chr10 85698328 85698486 -59890802 + MIR3 SINE MIR 34 187 -21 22 35 0 0 chr10 85698577 85698606 -59890682 + AT_rich Low_complexity Low_complexity 1 29 0 239 362 21 0 chr10 85698616 85698763 -59890525 + MIR3 SINE MIR 6 156 -64 380 259 101 61 chr10 85699731 85699975 -59889313 + MIR SINE MIR 8 252 -10 242 345 54 40 chr10 85700656 85700804 -59888484 - MIR SINE MIR -41 221 72 189 282 113 32 chr10 85701070 85701194 -59888094 + MIR SINE MIR 33 150 -58 345 211 0 0 chr10 85703847 85703918 -59885370 + MIR SINE MIR 50 120 -142 189 268 89 0 chr10 85703935 85703991 -59885297 + L2 LINE L2 3194 3254 -18 333 82 0 0 chr10 85705609 85705658 -59883630 + (CA)n Simple_repeat Simple_repeat 1 49 0 271 239 325 0 chr10 85705743 85705860 -59883428 + MIR SINE MIR 96 250 -12 2306 80 20 0 chr10 85705992 85706291 -59882997 + AluY SINE Alu 1 305 -6 21 57 0 0 chr10 85706385 85706420 -59882868 + AT_rich Low_complexity Low_complexity 1 35 0 225 311 98 8 chr10 85706634 85706766 -59882522 + L1MC4a LINE L1 5588 5731 -2077 2250 95 3 0 chr10 85706766 85707061 -59882227 + AluSx SINE Alu 1 296 -16 247 277 48 66 chr10 85707180 85707241 -59882047 + L1MC4a LINE L1 5762 5823 -1985 2126 110 3 0 chr10 85707241 85707532 -59881756 + AluY SINE Alu 1 292 -19 247 277 48 66 chr10 85707532 85707636 -59881652 + L1MC4a LINE L1 5823 5924 -1884 198 103 0 0 chr10 85707956 85707985 -59881303 + (CAGG)n Simple_repeat Simple_repeat 2 30 0 341 256 60 38 chr10 85708012 85708145 -59881143 + MIR SINE MIR 102 237 -25 384 317 21 0 chr10 85708572 85708728 -59880560 + MIR SINE MIR 2 145 -63 243 88 0 0 chr10 85708910 85708944 -59880344 + (CA)n Simple_repeat Simple_repeat 2 35 0 2387 95 0 0 chr10 85709035 85709340 -59879948 + AluSq SINE Alu 1 305 -8 211 216 75 119 chr10 85709859 85709993 -59879295 + MIR SINE MIR 33 160 -102 253 197 0 26 chr10 85710065 85710093 -59879195 + GA-rich Low_complexity Low_complexity 3 30 -46 618 171 137 0 chr10 85710093 85710210 -59879078 + FLAM_C SINE Alu 1 133 0 253 197 0 26 chr10 85710210 85710257 -59879031 + GA-rich Low_complexity Low_complexity 30 76 0 259 108 62 0 chr10 85710257 85710322 -59878966 - Charlie1 DNA MER1_type -112 2649 2581 793 171 0 50 chr10 85710322 85710462 -59878826 + FLAM_C SINE Alu 1 133 0 188 231 39 0 chr10 85710494 85710546 -59878742 - MIR SINE MIR -64 144 91 263 278 77 81 chr10 85711280 85711528 -59877760 - L2 LINE L2 0 3272 3026 183 367 0 0 chr10 85711736 85711796 -59877492 + L2 LINE L2 3249 3308 -5 475 305 76 2 chr10 85712261 85712439 -59876849 - MIR SINE MIR -62 146 7 1589 96 55 5 chr10 85712966 85713185 -59876103 - MER30 DNA MER1_type 0 230 1 197 309 72 21 chr10 85713350 85713447 -59875841 - MIR SINE MIR -160 102 1 394 344 148 11 chr10 85713497 85713680 -59875608 - MIR SINE MIR -40 222 15 471 35 0 0 chr10 85715365 85715422 -59873866 + (TG)n Simple_repeat Simple_repeat 2 58 0 352 328 48 0 chr10 85716061 85716186 -59873102 - L2 LINE L2 0 3313 3183 342 299 39 16 chr10 85716547 85716674 -59872614 + MIR3 SINE MIR 34 163 -45 420 283 41 7 chr10 85717546 85717691 -59871597 - L1ME4a LINE L1 0 6121 5972 285 310 60 17 chr10 85719038 85719154 -59870134 + L2 LINE L2 3143 3263 -9 186 222 29 0 chr10 85719163 85719220 -59870068 - MIR SINE MIR -93 115 63 277 245 21 75 chr10 85720735 85720829 -59868459 - MIR3 SINE MIR -52 156 68 184 205 26 0 chr10 85721348 85721387 -59867901 + MER5B DNA MER1_type 102 141 -37 206 237 0 0 chr10 85721892 85721930 -59867358 + (TG)n Simple_repeat Simple_repeat 1 38 0 290 318 26 9 chr10 85721974 85722089 -59867199 - MIR3 SINE MIR -48 160 37 275 297 32 36 chr10 85722475 85722656 -59866632 + MIR SINE MIR 3 251 -11 270 81 0 0 chr10 85723133 85723170 -59866118 + (CA)n Simple_repeat Simple_repeat 1 37 0 647 354 28 8 chr10 85723349 85723603 -59865685 + MIR SINE MIR 3 261 -1 512 239 69 19 chr10 85723625 85723784 -59865504 + MIR SINE MIR 17 183 -79 529 272 108 33 chr10 85724111 85724324 -59864964 + MIR SINE MIR 22 250 -12 230 394 0 0 chr10 85726930 85727024 -59862264 - MIR3 SINE MIR -15 193 100 575 300 40 31 chr10 85727091 85727314 -59861974 + MIR SINE MIR 2 226 -36 216 299 93 9 chr10 85727378 85727485 -59861803 - MIR3 SINE MIR -47 161 46 371 312 127 26 chr10 85727692 85727881 -59861407 + MIR SINE MIR 28 235 -27 648 211 79 47 chr10 85729226 85729416 -59859872 - MIR SINE MIR -65 197 2 329 279 38 63 chr10 85730081 85730239 -59859049 + MIR3 SINE MIR 34 187 -21 22 35 0 0 chr10 85730330 85730359 -59858929 + AT_rich Low_complexity Low_complexity 1 29 0 239 362 21 0 chr10 85730369 85730516 -59858772 + MIR3 SINE MIR 6 156 -64 380 259 101 61 chr10 85731483 85731727 -59857561 + MIR SINE MIR 8 252 -10 242 345 54 40 chr10 85732406 85732554 -59856734 - MIR SINE MIR -41 221 72 193 281 104 37 chr10 85732809 85732944 -59856344 + MIR SINE MIR 23 166 -96 345 211 0 0 chr10 85735590 85735661 -59853627 + MIR SINE MIR 50 120 -142 189 268 89 0 chr10 85735678 85735734 -59853554 + L2 LINE L2 3194 3254 -18 399 41 0 0 chr10 85737353 85737402 -59851886 + (CA)n Simple_repeat Simple_repeat 1 49 0 271 239 325 0 chr10 85737487 85737604 -59851684 + MIR SINE MIR 96 250 -12 2306 80 20 0 chr10 85737736 85738035 -59851253 + AluY SINE Alu 1 305 -6 21 57 0 0 chr10 85738129 85738164 -59851124 + AT_rich Low_complexity Low_complexity 1 35 0 225 311 98 8 chr10 85738378 85738510 -59850778 + L1MC4a LINE L1 5588 5731 -2077 2173 102 7 0 chr10 85738510 85738804 -59850484 + AluSx SINE Alu 1 296 -16 247 277 48 66 chr10 85738922 85738983 -59850305 + L1MC4a LINE L1 5762 5823 -1985 2111 110 3 0 chr10 85738983 85739274 -59850014 + AluY SINE Alu 1 292 -19 247 277 48 66 chr10 85739274 85739378 -59849910 + L1MC4a LINE L1 5823 5924 -1884 198 103 0 0 chr10 85739698 85739727 -59849561 + (CAGG)n Simple_repeat Simple_repeat 2 30 0 341 256 60 38 chr10 85739754 85739887 -59849401 + MIR SINE MIR 102 237 -25 384 317 21 0 chr10 85740313 85740469 -59848819 + MIR SINE MIR 2 145 -63 243 88 0 0 chr10 85740656 85740690 -59848598 + (CA)n Simple_repeat Simple_repeat 2 35 0 2393 92 0 0 chr10 85740780 85741085 -59848203 + AluSq SINE Alu 1 305 -8 211 216 75 119 chr10 85741605 85741739 -59847549 + MIR SINE MIR 33 160 -102 286 171 0 37 chr10 85741812 85741841 -59847447 + GA-rich Low_complexity Low_complexity 2 31 -49 710 160 118 0 chr10 85741841 85741960 -59847328 + FLAM_C SINE Alu 1 133 0 286 171 0 37 chr10 85741960 85742012 -59847276 + GA-rich Low_complexity Low_complexity 31 80 0 259 108 62 0 chr10 85742012 85742077 -59847211 - Charlie1 DNA MER1_type -112 2649 2581 793 171 0 50 chr10 85742077 85742217 -59847071 + FLAM_C SINE Alu 1 133 0 240 242 32 0 chr10 85742249 85742311 -59846977 - MIR SINE MIR -64 144 81 450 350 89 0 chr10 85742567 85742747 -59846541 + MIR SINE MIR 9 204 -58 207 268 195 12 chr10 85743500 85743582 -59845706 + MIR SINE MIR 57 153 -109 227 359 70 26 chr10 85744283 85744439 -59844849 + L2 LINE L2 3086 3248 -24 238 277 7 15 chr10 85744463 85744600 -59844688 + (TGGA)n Simple_repeat Simple_repeat 2 137 0 427 199 18 29 chr10 85744611 85744782 -59844506 + (TGGA)n Simple_repeat Simple_repeat 1 169 0 181 308 62 0 chr10 85745182 85745247 -59844041 - L2 LINE L2 -46 3226 3158 182 354 156 0 chr10 85745360 85745456 -59843832 - MIR SINE MIR -101 161 51 182 357 12 0 chr10 85745503 85745587 -59843701 - MIR3 SINE MIR -54 154 70 1664 148 3 39 chr10 85745593 85745876 -59843412 + AluJo SINE Alu 24 296 -16 240 337 24 0 chr10 85746479 85746562 -59842726 - MIR SINE MIR -20 242 158 281 245 28 57 chr10 85746755 85746861 -59842427 - MIR SINE MIR -104 158 56 343 116 58 0 chr10 85747793 85747862 -59841426 + G-rich Low_complexity Low_complexity 3 75 0 212 109 0 65 chr10 85747988 85748034 -59841254 + (GAGAA)n Simple_repeat Simple_repeat 4 46 0 307 218 16 73 chr10 85748036 85748160 -59841128 + GA-rich Low_complexity Low_complexity 2 118 0 309 345 6 58 chr10 85748224 85748395 -59840893 + L1MCa LINE L1 2226 2387 -4039 27 0 0 0 chr10 85748669 85748696 -59840592 + GC_rich Low_complexity Low_complexity 1 27 0 206 231 62 15 chr10 85750232 85750297 -59838991 - MIR SINE MIR -75 187 120 341 272 78 10 chr10 85750370 85750473 -59838815 + L2 LINE L2 3157 3266 -6 775 221 54 44 chr10 85750753 85750957 -59838331 - MER3 DNA MER1_type -3 206 1 273 223 158 27 chr10 85751103 85751223 -59838065 - MIR SINE MIR -43 165 20 240 240 1 58 chr10 85752771 85752850 -59836438 - MER5B DNA MER1_type -87 95 25 * 298 203 86 0 chr10 85752849 85752964 -59836324 + MIR SINE MIR 7 135 -73 824 166 194 0 chr10 85754574 85754749 -59834539 - MER3 DNA MER1_type 0 209 1 601 332 47 0 chr10 85754903 85755117 -59834171 + MIR SINE MIR 38 261 -1 190 152 0 0 chr10 85755245 85755278 -59834010 + MIR SINE MIR 110 142 -66 384 295 54 13 chr10 85756246 85756395 -59832893 + MIR SINE MIR 103 257 -5 288 200 0 0 chr10 85758866 85758941 -59830347 + (CA)n Simple_repeat Simple_repeat 1 75 0 204 260 20 0 chr10 85761916 85761966 -59827322 - MIR SINE MIR -86 122 72 301 296 34 11 chr10 85762929 85763017 -59826271 - MIR SINE MIR -14 248 159 463 201 53 105 chr10 85763037 85763105 -59826183 - MER3 DNA MER1_type -7 202 132 1899 156 3 13 chr10 85763105 85763420 -59825868 + AluJo SINE Alu 1 312 0 463 201 53 105 chr10 85763420 85763560 -59825728 - MER3 DNA MER1_type -77 132 5 395 291 95 58 chr10 85764474 85764620 -59824668 - L1M4 LINE L1 -940 5206 5046 2162 101 14 0 chr10 85764620 85764917 -59824371 - AluSx SINE Alu -11 301 1 395 291 95 58 chr10 85764917 85765011 -59824277 - L1M4 LINE L1 -1100 5046 4957 533 294 126 26 chr10 85765188 85765497 -59823791 - L2 LINE L2 -22 3291 2952 332 285 106 8 chr10 85765830 85765953 -59823335 + MIR SINE MIR 58 192 -70 243 312 118 0 chr10 85766694 85766787 -59822501 + MIR SINE MIR 142 245 -17 1114 162 11 21 chr10 85767205 85767396 -59821892 + MER5A DNA MER1_type 1 189 0 237 65 0 0 chr10 85770460 85770491 -59818797 + (T)n Simple_repeat Simple_repeat 1 31 0 208 337 79 20 chr10 85770851 85770952 -59818336 + MIR3 SINE MIR 81 187 -21 235 282 173 0 chr10 85771116 85771226 -59818062 - MIR3 SINE MIR -35 173 45 1147 233 9 4 chr10 85772454 85772686 -59816602 - MIR SINE MIR -21 241 9 207 361 0 0 chr10 85773561 85773622 -59815666 - L2 LINE L2 -19 3294 3234 227 241 19 0 chr10 85773716 85773770 -59815518 - L2 LINE L2 -18 3254 3200 306 0 0 0 chr10 85774462 85774496 -59814792 + (CA)n Simple_repeat Simple_repeat 2 35 0 293 276 0 11 chr10 85775475 85775562 -59813726 - HsTC2 DNA Tc2 -18 1880 1795 340 280 45 38 chr10 85776368 85776500 -59812788 - MIR SINE MIR -97 165 33 218 264 69 14 chr10 85776642 85776714 -59812574 - MIR SINE MIR -69 193 118 432 311 97 61 chr10 85776925 85776992 -59812296 - MIR SINE MIR -22 240 177 1974 120 6 54 chr10 85776992 85777308 -59811980 + AluSx SINE Alu 1 301 -11 432 311 97 61 chr10 85777308 85777468 -59811820 - MIR SINE MIR -85 177 5 1975 141 13 13 chr10 85778351 85778663 -59810625 - AluSx SINE Alu 0 312 1 246 388 0 0 chr10 85780407 85780487 -59808801 - MER91A DNA MER1_type -116 80 1 291 230 111 18 chr10 85780747 85780870 -59808418 + MIR SINE MIR 23 155 -62 248 212 78 36 chr10 85781170 85781253 -59808035 - MIR SINE MIR -67 141 64 228 283 71 71 chr10 85781997 85782110 -59807178 - MIR SINE MIR -111 151 39 262 273 0 0 chr10 85783151 85783217 -59806071 - MIR3 SINE MIR 0 208 143 221 0 0 33 chr10 85783401 85783431 -59805857 + (TTA)n Simple_repeat Simple_repeat 2 30 0 9408 53 7 129 chr10 85783438 85784985 -59804303 - SVA Other Other -1 1385 29 1604 169 44 3 chr10 85784988 85785283 -59804005 - AluSx SINE Alu -5 307 1 1683 181 3 3 chr10 85785285 85785577 -59803711 - AluJo SINE Alu -17 295 4 223 308 286 26 chr10 85785834 85786100 -59803188 - L3 LINE CR1 -656 921 587 251 231 0 0 chr10 85786793 85786858 -59802430 - MIR SINE MIR -78 130 66 618 281 20 0 chr10 85788251 85788397 -59800891 + MIR SINE MIR 8 156 -106 437 175 83 50 chr10 85789659 85789779 -59799509 - MIR SINE MIR -111 151 28 223 341 163 0 chr10 85790193 85790316 -59798972 + MIR SINE MIR 107 249 -13 354 294 26 32 chr10 85790337 85790497 -59798791 - MIR SINE MIR -6 256 98 263 342 19 25 chr10 85792546 85792704 -59796584 + MER112 DNA MER1_type 9 165 -95 232 182 182 15 chr10 85792777 85792843 -59796445 - MIR SINE MIR -99 163 87 * 467 282 109 21 chr10 85792831 85793115 -59796173 - L2 LINE L2 -68 3245 2937 261 83 0 0 chr10 85793519 85793555 -59795733 + (CA)n Simple_repeat Simple_repeat 2 37 0 323 302 93 8 chr10 85796800 85796929 -59792359 + MIR SINE MIR 5 144 -118 219 146 0 0 chr10 85797242 85797283 -59792005 + (CAG)n Simple_repeat Simple_repeat 3 43 0 201 74 0 0 chr10 85798130 85798157 -59791131 + (CACCC)n Simple_repeat Simple_repeat 5 31 0 204 128 0 26 chr10 85798274 85798313 -59790975 + (TCCCC)n Simple_repeat Simple_repeat 2 39 0 294 336 9 19 chr10 85798768 85798875 -59790413 + MIR3 SINE MIR 14 119 -89 183 301 80 62 chr10 85798968 85799081 -59790207 + MIR3 SINE MIR 52 166 -42 295 349 82 15 chr10 85800462 85800657 -59788631 - L3 LINE CR1 -7 1570 1363 190 345 158 12 chr10 85800870 85801035 -59788253 - L3 LINE CR1 -374 1203 1015 21 0 0 0 chr10 85801925 85801946 -59787342 + AT_rich Low_complexity Low_complexity 1 21 0 322 340 60 11 chr10 85802014 85802279 -59787009 - L1ME4a LINE L1 -195 5926 5649 210 332 82 19 chr10 85803036 85803171 -59786117 + MIR SINE MIR 20 150 -58 491 276 48 2 chr10 85804693 85804873 -59784415 - MIR SINE MIR -32 230 33 238 261 236 46 chr10 85807444 85807639 -59781649 - L2 LINE L2 -96 3176 2945 1269 99 0 22 chr10 85807682 85807864 -59781424 - AluY SINE Alu -1 310 133 2402 67 3 0 chr10 85807865 85808164 -59781124 - AluY SINE Alu -11 300 1 1719 153 44 7 chr10 85808188 85808483 -59780805 + AluJb SINE Alu 1 306 -6 195 261 206 11 chr10 85813222 85813314 -59775974 - L2 LINE L2 -1 3271 3162 204 219 0 0 chr10 85815880 85815921 -59773367 + CT-rich Low_complexity Low_complexity 4 44 0 276 283 38 9 chr10 85822692 85822798 -59766490 - MER112 DNA MER1_type -54 206 98 396 0 0 0 chr10 85822798 85822842 -59766446 + (TG)n Simple_repeat Simple_repeat 2 45 0 303 230 119 65 chr10 85823824 85823999 -59765289 + L2 LINE L2 1820 2015 -1299 1741 180 148 13 chr10 85823999 85824376 -59764912 + MSTC LTR MaLR 1 428 0 303 230 119 65 chr10 85824376 85824461 -59764827 + L2 LINE L2 2015 2094 -1220 828 265 88 64 chr10 85824469 85824892 -59764396 + LTR16A1 LTR ERVL 6 438 -19 595 313 48 44 chr10 85825024 85825459 -59763829 + HERV16 LTR ERVL 160 596 -4400 * 2334 330 25 22 chr10 85825434 85826497 -59762791 + ERVL LTR ERVL 3620 4686 -1078 899 228 88 47 chr10 85826637 85827023 -59762265 + LTR16A1 LTR ERVL 1 402 -55 548 294 103 4 chr10 85827132 85827384 -59761904 - Charlie8 DNA MER1_type -2140 277 1 304 380 7 20 chr10 85827895 85828071 -59761217 + GA-rich Low_complexity Low_complexity 3 299 0 24 53 0 0 chr10 85828291 85828329 -59760959 + GC_rich Low_complexity Low_complexity 1 38 0 243 0 0 0 chr10 85829940 85829967 -59759321 + (A)n Simple_repeat Simple_repeat 1 27 0 478 247 72 36 chr10 85831698 85831864 -59757424 - MIR SINE MIR -2 260 89 288 315 94 21 chr10 85831892 85832044 -59757244 - MIR3 SINE MIR -57 151 4 246 359 72 3 chr10 85832621 85832800 -59756488 + MIR SINE MIR 1 192 -61 1910 185 118 21 chr10 85832809 85833231 -59756057 + MLT1C LTR MaLR 1 463 -4 746 279 151 32 chr10 85833238 85833807 -59755481 + L2 LINE L2 2693 3312 -1 204 218 0 18 chr10 85834232 85834287 -59755001 + (CCTG)n Simple_repeat Simple_repeat 1 54 0 428 271 9 9 chr10 85834603 85834710 -59754578 - MIR SINE MIR -64 144 38 282 240 322 0 chr10 85834998 85835144 -59754144 + L3 LINE CR1 1354 1546 -31 238 268 0 0 chr10 85835644 85835700 -59753588 + MIR SINE MIR 76 131 -77 368 337 115 8 chr10 85835900 85836136 -59753152 + HAL1b LINE L1 1101 6121 0 280 331 169 0 chr10 85836390 85836568 -59752720 + L2 LINE L2 2614 2821 -493 1592 210 80 0 chr10 85836991 85837329 -59751959 + MLT1A1 LTR MaLR 1 365 0 315 352 69 0 chr10 85837664 85837809 -59751479 - MIR SINE MIR -51 211 57 304 316 45 23 chr10 85837984 85838117 -59751171 + MIR3 SINE MIR 57 192 -16 458 309 64 25 chr10 85838365 85838569 -59750719 - MIR SINE MIR -17 245 34 2152 114 3 0 chr10 85838728 85839027 -59750261 + AluSx SINE Alu 1 300 -12 2083 133 13 0 chr10 85839062 85839363 -59749925 + AluSq SINE Alu 1 305 -8 181 277 20 0 chr10 85840361 85840462 -59748826 + GA-rich Low_complexity Low_complexity 1 103 0 549 272 54 0 chr10 85840560 85840707 -59748581 + MIR SINE MIR 52 206 -56 260 343 10 0 chr10 85841515 85841614 -59747674 - MIR SINE MIR -66 142 43 276 293 271 7 chr10 85842313 85842453 -59746835 + MIR SINE MIR 80 256 -6 738 279 55 34 chr10 85842972 85843209 -59746079 - MIR SINE MIR -16 246 5 513 332 70 5 chr10 85843475 85843689 -59745599 + MIR SINE MIR 29 256 -6 886 107 25 0 chr10 85845036 85845158 -59744130 - FLAM_C SINE Alu -18 125 1 373 277 68 11 chr10 85845161 85845338 -59743950 - MER113 DNA MER1_type? -206 315 129 927 230 62 14 chr10 85845548 85845839 -59743449 + LTR16C LTR ERVL 187 491 0 345 260 124 68 chr10 85846312 85846562 -59742726 - L1ME4a LINE L1 -56 6065 5802 330 335 92 21 chr10 85848251 85848490 -59740798 - Charlie8 DNA MER1_type -2161 256 1 261 180 0 0 chr10 85849312 85849362 -59739926 + (CA)n Simple_repeat Simple_repeat 2 51 0 373 305 11 23 chr10 85849528 85849702 -59739586 + (CATATA)n Simple_repeat Simple_repeat 1 172 0 * 513 298 6 11 chr10 85849614 85849795 -59739493 + (CA)n Simple_repeat Simple_repeat 1 180 0 201 311 68 88 chr10 85850340 85850488 -59738800 - MIR SINE MIR -11 251 107 228 355 26 40 chr10 85850790 85850942 -59738346 + MIR SINE MIR 92 241 -21 419 323 23 8 chr10 85851095 85851225 -59738063 + MIR3 SINE MIR 9 140 -68 287 313 137 37 chr10 85851453 85851981 -59737307 + L2 LINE L2 2557 3160 -153 228 100 0 0 chr10 85851981 85852021 -59737267 + (CA)n Simple_repeat Simple_repeat 2 41 0 287 313 137 37 chr10 85852021 85852061 -59737227 + L2 LINE L2 3160 3195 -118 1972 157 0 3 chr10 85852101 85852413 -59736875 - AluJb SINE Alu 0 312 2 336 200 13 0 chr10 85852414 85852489 -59736799 + MER58A DNA MER1_type 46 121 0 271 344 41 0 chr10 85852530 85852652 -59736636 + L2 LINE L2 3174 3300 -13 201 263 90 90 chr10 85853117 85853152 -59736136 - MIR SINE MIR -20 242 208 2526 51 0 6 chr10 85853152 85853464 -59735824 - AluY SINE Alu -1 310 1 201 263 90 90 chr10 85853464 85853561 -59735727 - MIR SINE MIR -53 209 110 746 306 18 5 chr10 85853852 85854071 -59735217 + MIR SINE MIR 3 224 -38 197 280 20 0 chr10 85854580 85854630 -59734658 - L2 LINE L2 -1 3312 3262 265 280 13 0 chr10 85854904 85854979 -59734309 + MER5A DNA MER1_type 29 104 -85 2115 108 7 0 chr10 85855007 85855303 -59733985 + AluSq SINE Alu 1 298 -15 512 257 158 27 chr10 85856687 85856870 -59732418 - MIR SINE MIR -49 213 7 324 290 31 24 chr10 85857140 85857299 -59731989 - MIR3 SINE MIR -41 167 8 805 193 17 72 chr10 85857706 85857825 -59731463 + AluJo SINE Alu 3 110 -202 1864 108 87 17 chr10 85857825 85858112 -59731176 - AluSx SINE Alu -5 307 1 805 193 17 72 chr10 85858112 85858173 -59731115 + AluJo SINE Alu 110 173 -139 1668 127 0 62 chr10 85858173 85858465 -59730823 + AluJo SINE Alu 39 312 0 251 350 71 29 chr10 85859325 85859465 -59729823 + MIR SINE MIR 76 221 -41 541 270 84 30 chr10 85859710 85860076 -59729212 + L2 LINE L2 2627 2998 -274 262 316 13 0 chr10 85860188 85860267 -59729021 + L2 LINE L2 3193 3272 0 395 219 92 9 chr10 85860712 85860840 -59728448 + MIR SINE MIR 12 149 -59 212 186 23 0 chr10 85861798 85861841 -59727447 + (TGAA)n Simple_repeat Simple_repeat 1 44 0 392 101 83 18 chr10 85862458 85862567 -59726721 + C-rich Low_complexity Low_complexity 3 118 0 296 228 76 0 chr10 85862924 85863016 -59726272 - MER58A DNA MER1_type -125 99 1 607 215 8 0 chr10 85864068 85864198 -59725090 + MLT1H LTR MaLR 61 191 -358 354 293 37 24 chr10 85864292 85864456 -59724832 + MLT1H LTR MaLR 384 549 0 496 252 210 48 chr10 85864646 85864955 -59724333 + MLT1J2 LTR MaLR 74 432 -18 656 154 6 0 chr10 85865814 85865970 -59723318 + (TG)n Simple_repeat Simple_repeat 2 158 0 322 308 108 28 chr10 85866208 85866529 -59722759 + MLT1G LTR MaLR 202 544 -11 1876 156 0 13 chr10 85866983 85867285 -59722003 + AluJo SINE Alu 1 298 -14 431 225 0 11 chr10 85868660 85868749 -59720539 + L2 LINE L2 3215 3302 -11 195 42 0 0 chr10 85868750 85868774 -59720514 + (TGAA)n Simple_repeat Simple_repeat 4 27 0 1685 221 21 0 chr10 85869064 85869445 -59719843 - L1MB8 LINE L1 -56 6122 5734 2198 241 39 28 chr10 85869467 85870156 -59719132 + L1ME2 LINE L1 5459 6155 -9 224 330 57 0 chr10 85870696 85870784 -59718504 - MIR3 SINE MIR -28 180 88 727 240 95 16 chr10 85871270 85871512 -59717776 - L1ME3 LINE L1 -4 6158 5898 851 177 0 0 chr10 85871524 85871665 -59717623 + FRAM SINE Alu 20 160 -16 23 0 0 0 chr10 85871671 85871694 -59717594 + AT_rich Low_complexity Low_complexity 1 23 0 753 274 25 23 chr10 85871810 85872116 -59717172 + MLT1G3 LTR MaLR 1 275 -255 792 190 92 0 chr10 85872122 85872306 -59716982 - L1ME3 LINE L1 -309 5857 5657 2255 89 0 22 chr10 85872306 85872621 -59716667 - AluY SINE Alu -3 308 1 22 0 0 0 chr10 85872621 85872643 -59716645 + AT_rich Low_complexity Low_complexity 1 22 0 735 193 0 0 chr10 85872643 85872762 -59716526 - FLAM_C SINE Alu -24 119 1 1535 214 47 36 chr10 85872762 85873226 -59716062 - L1ME3 LINE L1 -499 5663 5193 438 87 0 0 chr10 85873216 85873296 -59715992 + (TTCC)n Simple_repeat Simple_repeat 1 80 0 * 1318 194 47 47 chr10 85873296 85873595 -59715693 - AluJo SINE Alu -13 299 1 261 301 0 44 chr10 85873595 85873731 -59715557 - L1ME3 LINE L1 -935 5211 5082 196 260 10 19 chr10 85873820 85873924 -59715364 + (TCCA)n Simple_repeat Simple_repeat 1 103 0 235 333 115 0 chr10 85874227 85874323 -59714965 - L3 LINE CR1 -550 1027 921 205 330 34 0 chr10 85875452 85875540 -59713748 - MIR SINE MIR -25 237 147 261 315 133 17 chr10 85875854 85876149 -59713139 + LTR16B LTR ERVL 102 440 -10 410 254 30 82 chr10 85876236 85876370 -59712918 + MIR SINE MIR 100 226 -36 267 314 220 0 chr10 85876424 85876542 -59712746 + L2 LINE L2 3129 3272 0 829 181 0 0 chr10 85876565 85876698 -59712590 + FLAM_C SINE Alu 1 133 0 1125 273 150 12 chr10 85876973 85877467 -59711821 - MLT1F1 LTR MaLR -5 562 1 23 0 0 0 chr10 85877583 85877606 -59711682 + AT_rich Low_complexity Low_complexity 1 23 0 1638 173 11 3 chr10 85877612 85877896 -59711392 - AluJo SINE Alu -16 296 11 806 146 0 56 chr10 85878207 85878351 -59710937 - AluJo SINE Alu -151 161 26 1719 141 4 0 chr10 85879195 85879465 -59709823 + AluSx SINE Alu 42 312 0 404 317 181 7 chr10 85879553 85879840 -59709448 - L3 LINE CR1 -5 1572 1236 232 341 92 6 chr10 85880267 85880431 -59708857 + MIR SINE MIR 85 262 0 1469 103 0 27 chr10 85880447 85880627 -59708661 - AluSg/x SINE Alu 0 312 138 2353 68 3 0 chr10 85880627 85880923 -59708365 - AluSx SINE Alu -15 297 1 1469 103 0 27 chr10 85880923 85880966 -59708322 - AluSg/x SINE Alu -174 138 95 236 359 43 0 chr10 85881663 85881755 -59707533 + MIR SINE MIR 132 227 -35 373 252 73 28 chr10 85881857 85881998 -59707290 + MIR SINE MIR 37 191 -62 361 195 26 0 chr10 85882360 85882437 -59706851 - MLT1F1 LTR MaLR -1 566 488 275 278 11 22 chr10 85883239 85883319 -59705969 + L2 LINE L2 3179 3257 -15 353 332 35 8 chr10 85883319 85883460 -59705828 + MIR3 SINE MIR 4 147 -65 754 287 25 75 chr10 85883460 85883819 -59705469 + MER102b DNA MER1_type 1 341 0 186 264 173 27 chr10 85884541 85884651 -59704637 + MIR SINE MIR 20 145 -117 216 175 35 35 chr10 85885558 85885615 -59703673 - MIR SINE MIR -61 147 91 213 313 12 0 chr10 85885648 85885728 -59703560 + MIR3 SINE MIR 96 176 -32 21 36 0 0 chr10 85886895 85886923 -59702365 + GC_rich Low_complexity Low_complexity 1 28 0 199 247 35 47 chr10 85886923 85887008 -59702280 + MIR SINE MIR 80 163 -99 222 179 89 0 chr10 85888570 85888626 -59700662 - MIR SINE MIR -83 125 65 201 245 0 20 chr10 85889207 85889256 -59700032 + GA-rich Low_complexity Low_complexity 1 48 0 2272 156 61 0 chr10 85894078 85894469 -59694819 + MSTA LTR MaLR 2 416 -12 378 276 78 9 chr10 85895160 85895276 -59694012 - MIR3 SINE MIR -46 162 39 255 152 0 0 chr10 85895471 85895517 -59693771 + (TG)n Simple_repeat Simple_repeat 2 47 0 268 271 52 26 chr10 85895865 85895881 -59693407 - L1MA10 LINE L1 -1 6333 6318 797 223 145 8 chr10 85895881 85896123 -59693165 - L1ME2 LINE L1 -9 6155 5881 822 156 218 45 chr10 85896349 85896592 -59692696 + LTR12 LTR ERV1 1 285 -429 267 265 0 0 chr10 85896593 85896661 -59692627 + LTR30 LTR ERV1 553 620 -102 650 140 0 0 chr10 85896676 85896776 -59692512 + LTR12 LTR ERV1 615 714 0 1672 146 0 85 chr10 85897053 85897381 -59691907 + AluJo SINE Alu 1 300 -12 456 304 25 13 chr10 85898177 85898335 -59690953 + MIR SINE MIR 71 230 -32 1833 139 0 45 chr10 85898358 85898667 -59690621 + AluJb SINE Alu 1 295 -17 234 304 27 62 chr10 85899473 85899585 -59689703 - MIR SINE MIR -70 192 85 186 271 90 60 chr10 85899783 85899916 -59689372 + MIR3 SINE MIR 19 155 -53 513 286 54 81 chr10 85901198 85901569 -59687719 - L1ME2 LINE L1 -257 5864 5504 380 354 7 0 chr10 85901604 85901748 -59687540 - L3 LINE CR1 -11 1566 1422 1551 207 3 3 chr10 85902617 85902921 -59686367 - AluJb SINE Alu -8 304 1 216 0 0 0 chr10 85903101 85903125 -59686163 + (TC)n Simple_repeat Simple_repeat 1 24 0 258 301 69 15 chr10 85903129 85903332 -59685956 - AluSg/x SINE Alu -13 289 76 674 309 28 12 chr10 85903693 85903945 -59685343 + MIR SINE MIR 4 259 -3 252 376 32 26 chr10 85904241 85904430 -59684858 - MIR SINE MIR -6 256 67 330 67 0 0 chr10 85904961 85905006 -59684282 + (TG)n Simple_repeat Simple_repeat 1 45 0 1853 146 10 3 chr10 85905035 85905344 -59683944 - AluSx SINE Alu -1 311 1 262 275 20 47 chr10 85906470 85906619 -59682669 + CT-rich Low_complexity Low_complexity 1 145 0 510 226 45 0 chr10 85907373 85907506 -59681782 - MLT1I LTR MaLR -270 139 1 615 290 47 21 chr10 85907699 85907892 -59681396 + MIR SINE MIR 1 198 -64 1942 153 37 0 chr10 85908625 85908951 -59680337 + L1MA6 LINE L1 5963 6300 0 2032 91 56 3 chr10 85909054 85909340 -59679948 + AluSx SINE Alu 1 301 -11 499 59 0 0 chr10 85910050 85910118 -59679170 + L1PA8 LINE L1 6105 6172 0 539 239 33 17 chr10 85910146 85910326 -59678962 + L1MEc LINE L1 1890 2072 -4324 364 141 0 0 chr10 85910351 85910415 -59678873 - MLT1D LTR MaLR -3 502 439 2041 114 3 3 chr10 85910415 85910712 -59678576 + AluSg1 SINE Alu 1 297 -12 700 204 45 0 chr10 85910713 85910870 -59678418 + L1MB8 LINE L1 6009 6172 -6 311 185 49 12 chr10 85911611 85911692 -59677596 - L1M3 LINE L1 -765 5569 5486 579 227 71 27 chr10 85911701 85911926 -59677362 + L1MEc LINE L1 2093 2327 -4069 425 266 108 7 chr10 85911926 85912065 -59677223 + LTR41 LTR ERVL 1 153 -620 261 207 0 0 chr10 85912081 85912139 -59677149 - LTR5 LTR ERVK -165 804 747 2154 198 45 20 chr10 85912820 85913356 -59675932 + L1MB7 LINE L1 5620 6168 -16 749 160 24 24 chr10 85913944 85914113 -59675175 + L1MB8 LINE L1 4844 5012 -1134 867 203 15 10 chr10 85914120 85914317 -59674971 + AluJo SINE Alu 96 293 -19 237 220 0 20 chr10 85914422 85914472 -59674816 - L1M3 LINE L1 -2054 4092 4044 * 2606 205 56 16 chr10 85914447 85915266 -59674022 + L1MB8 LINE L1 5051 5907 -271 858 152 11 22 chr10 85915401 85915579 -59673709 - L1M3 LINE L1 -2387 3759 3584 189 74 0 0 chr10 85915586 85915613 -59673675 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 255 321 98 0 chr10 85915665 85915858 -59673430 + L1ME LINE L1 5317 5528 -634 210 136 68 0 chr10 85916898 85916942 -59672346 + (CGGGG)n Simple_repeat Simple_repeat 5 51 0 27 96 0 0 chr10 85916985 85917068 -59672220 + GC_rich Low_complexity Low_complexity 1 83 0 24 67 0 0 chr10 85917136 85917181 -59672107 + GC_rich Low_complexity Low_complexity 1 45 0 22 70 0 0 chr10 85917438 85917481 -59671807 + GC_rich Low_complexity Low_complexity 1 43 0 232 245 0 0 chr10 85917497 85917569 -59671719 + (GCCTG)n Simple_repeat Simple_repeat 1 72 0 184 259 37 0 chr10 85919497 85919551 -59669737 + MIR SINE MIR 87 142 -66 608 247 26 0 chr10 85920903 85921057 -59668231 - MER103 DNA DNA -7 159 2 182 282 103 51 chr10 85921085 85921202 -59668086 - L3 LINE CR1 -149 1428 1306 342 0 0 0 chr10 85921508 85921546 -59667742 + (TG)n Simple_repeat Simple_repeat 2 39 0 228 248 248 10 chr10 85921955 85922056 -59667232 - MIR SINE MIR -67 141 17 200 330 126 39 chr10 85922376 85922479 -59666809 - MIR3 SINE MIR -53 155 44 207 0 0 0 chr10 85922494 85922517 -59666771 + (TG)n Simple_repeat Simple_repeat 2 24 0 450 333 20 15 chr10 85922543 85922744 -59666544 + L2 LINE L2 2857 3058 -214 1183 97 11 17 chr10 85922816 85922992 -59666296 - AluSg/x SINE Alu -9 301 127 214 363 40 24 chr10 85923037 85923161 -59666127 + L2 LINE L2 3173 3298 -15 270 210 16 16 chr10 85923303 85923365 -59665923 + L3 LINE CR1 1407 1468 -109 483 329 19 6 chr10 85925096 85925254 -59664034 + MIR SINE MIR 71 230 -32 1896 136 0 45 chr10 85925277 85925587 -59663701 + AluJb SINE Alu 1 296 -16 252 239 46 64 chr10 85926894 85927003 -59662285 + MIR3 SINE MIR 81 187 -21 215 81 54 0 chr10 85927414 85927451 -59661837 + GA-rich Low_complexity Low_complexity 2 40 0 1098 152 11 11 chr10 85927735 85927913 -59661375 + L1MB3 LINE L1 6004 6181 -2 259 282 48 19 chr10 85927913 85928016 -59661272 + MER5A DNA MER1_type 66 171 -18 242 281 140 18 chr10 85928032 85928146 -59661142 + MIR SINE MIR 131 258 -4 213 380 85 0 chr10 85928211 85928340 -59660948 - L3 LINE CR1 -122 1455 1316 300 218 115 13 chr10 85929379 85929457 -59659831 - MIR SINE MIR -58 150 65 647 243 92 10 chr10 85929558 85929764 -59659524 - MIR SINE MIR -12 250 28 303 222 121 50 chr10 85930775 85930874 -59658414 + L1ME4a LINE L1 6002 6107 -14 184 317 24 24 chr10 85931071 85931153 -59658135 + MER5A DNA MER1_type 9 90 -99 555 296 45 0 chr10 85931562 85931741 -59657547 - MIR SINE MIR -37 225 39 521 42 14 0 chr10 85931918 85931990 -59657298 + (TG)n Simple_repeat Simple_repeat 1 73 0 525 280 21 0 chr10 85932422 85932565 -59656723 + MIR SINE MIR 117 262 0 4492 221 29 48 chr10 85932898 85933056 -59656232 - L1MB8 LINE L1 -6 6408 6249 2022 124 7 0 chr10 85933056 85933354 -59655934 - AluSx SINE Alu -12 300 1 4492 221 29 48 chr10 85933354 85934032 -59655256 - L1MB8 LINE L1 -165 6249 5560 2684 159 45 12 chr10 85934032 85934542 -59654746 - L1MB3 LINE L1 -2 6181 5655 4492 221 29 48 chr10 85934542 85934686 -59654602 - L1MB8 LINE L1 -854 5560 5415 874 238 0 0 chr10 85934686 85934846 -59654442 - FRAM SINE Alu -6 160 1 4492 221 29 48 chr10 85934846 85936024 -59653264 - L1MB8 LINE L1 -999 5415 2081 732 191 31 5 chr10 85936020 85936214 -59653074 - L1MB8 LINE L1 -4917 1467 1269 * 813 294 34 4 chr10 85936792 85937027 -59652261 - MIR SINE MIR -1 261 20 387 360 6 29 chr10 85938235 85938407 -59650881 - L2 LINE L2 -5 3308 3141 565 156 62 129 chr10 85938495 85938533 -59650755 - ORSL DNA AcHobo -36 239 200 2319 107 0 0 chr10 85938533 85938842 -59650446 - AluSx SINE Alu -3 309 1 565 156 62 129 chr10 85938842 85938967 -59650321 - ORSL DNA AcHobo -75 200 68 583 62 18 26 chr10 85938967 85939080 -59650208 + (TA)n Simple_repeat Simple_repeat 2 113 0 2219 109 0 0 chr10 85939080 85939384 -59649904 - AluSx SINE Alu -8 304 1 565 156 62 129 chr10 85939384 85939474 -59649814 - ORSL DNA AcHobo -205 70 1 2205 121 0 6 chr10 85940724 85941039 -59648249 + AluSq SINE Alu 1 313 0 436 175 21 0 chr10 85941159 85941256 -59648032 + GA-rich Low_complexity Low_complexity 4 102 0 206 333 0 16 chr10 85941402 85941465 -59647823 + L2 LINE L2 3208 3269 -3 798 250 13 31 chr10 85941612 85941836 -59647452 + MIR SINE MIR 22 241 -21 1985 122 22 0 chr10 85941862 85942173 -59647115 - AluSx SINE Alu 0 317 1 225 182 0 23 chr10 85942935 85942979 -59646309 + L2 LINE L2 3017 3059 -213 217 320 110 10 chr10 85943224 85943324 -59645964 + MIR SINE MIR 35 144 -118 194 318 0 0 chr10 85943353 85943397 -59645891 + L2 LINE L2 3210 3253 -19 205 240 40 0 chr10 85943600 85943650 -59645638 + (CATG)n Simple_repeat Simple_repeat 1 52 0 283 335 90 0 chr10 85943650 85943817 -59645471 + L2 LINE L2 2902 3083 -189 450 332 30 25 chr10 85944263 85944462 -59644826 + MIR SINE MIR 22 221 -41 216 231 19 0 chr10 85945010 85945062 -59644226 + CT-rich Low_complexity Low_complexity 2 54 0 219 244 195 0 chr10 85945068 85945150 -59644138 - MIR SINE MIR -152 110 13 276 268 0 0 chr10 85945596 85945652 -59643636 + MIR SINE MIR 204 259 -3 894 209 87 0 chr10 85945763 85945969 -59643319 - MIR SINE MIR -20 242 19 296 274 49 29 chr10 85946076 85946178 -59643110 - MIR SINE MIR -83 125 22 256 403 0 17 chr10 85946374 85946493 -59642795 + MIR SINE MIR 82 198 -64 403 234 9 65 chr10 85946584 85946691 -59642597 + MER5A DNA MER1_type 9 109 -80 237 330 99 0 chr10 85947106 85947197 -59642091 + L3b LINE CR1 1288 1387 -196 227 343 78 10 chr10 85947276 85947378 -59641910 - MIR3 SINE MIR -22 186 78 232 200 120 53 chr10 85947731 85947806 -59641482 + MIR3 SINE MIR 81 160 -48 377 312 71 24 chr10 85947806 85947976 -59641312 - MER5B DNA MER1_type 0 178 1 243 0 0 0 chr10 85948864 85948891 -59640397 + (TC)n Simple_repeat Simple_repeat 1 27 0 213 121 0 0 chr10 85948891 85948924 -59640364 + (CA)n Simple_repeat Simple_repeat 2 34 0 255 301 226 0 chr10 85948928 85949021 -59640267 - MIR SINE MIR -63 145 32 409 236 152 36 chr10 85949304 85949469 -59639819 + MIR SINE MIR 9 192 -70 423 320 27 16 chr10 85949774 85949984 -59639304 - MIR SINE MIR -48 214 1 189 252 204 19 chr10 85950934 85951037 -59638251 + MIR SINE MIR 25 146 -62 332 296 93 81 chr10 85951724 85952207 -59637081 + L2 LINE L2 2423 2911 -403 813 251 195 42 chr10 85952279 85952685 -59636603 - L2 LINE L2 -10 3303 2836 481 226 7 90 chr10 85953521 85953567 -59635721 - MIR3 SINE MIR -11 197 149 420 281 118 11 chr10 85953567 85953745 -59635543 - MER117 DNA MER1_type 0 197 1 481 226 7 90 chr10 85953745 85953853 -59635435 - MIR3 SINE MIR -59 149 56 278 319 32 0 chr10 85954067 85954161 -59635127 + L2 LINE L2 3141 3237 -35 234 270 130 17 chr10 85954368 85954483 -59634805 - MIR3 SINE MIR -79 129 2 512 219 17 0 chr10 85954882 85955001 -59634287 + MIR SINE MIR 33 153 -55 477 264 82 6 chr10 85955063 85955222 -59634066 + MER5A DNA MER1_type 1 171 -18 508 210 23 10 chr10 85955886 85956017 -59633271 + MIR SINE MIR 37 163 -45 467 196 82 2 chr10 85956387 85956541 -59632747 + MIR SINE MIR 13 175 -68 221 295 0 33 chr10 85956657 85956718 -59632570 - MIR SINE MIR -60 148 90 240 269 13 67 chr10 85958647 85958796 -59630492 + CT-rich Low_complexity Low_complexity 1 141 0 226 343 52 22 chr10 85959322 85959456 -59629832 + MIR SINE MIR 100 237 -25 382 281 33 25 chr10 85959613 85959734 -59629554 + L2 LINE L2 3151 3272 0 405 238 69 3 chr10 85959844 85960022 -59629266 + MIR SINE MIR 22 255 -7 2289 90 3 3 chr10 85960079 85960390 -59628898 + AluY SINE Alu 1 311 0 294 250 38 0 chr10 85960949 85961029 -59628259 - MIR3 SINE MIR -32 176 94 476 357 39 0 chr10 85961118 85961300 -59627988 + MIR SINE MIR 5 193 -69 449 286 54 81 chr10 85962203 85962574 -59626714 - L1ME4a LINE L1 -257 5864 5504 491 319 7 0 chr10 85962609 85962753 -59626535 - L3 LINE CR1 -11 1566 1422 241 339 43 35 chr10 85963002 85963117 -59626171 + MIR SINE MIR 33 148 -60 366 355 9 21 chr10 85963704 85963915 -59625373 + MIR SINE MIR 56 262 0 724 309 28 12 chr10 85964204 85964456 -59624832 - MIR SINE MIR -3 259 4 525 170 374 23 chr10 85965690 85965861 -59623427 - MIR SINE MIR -29 233 3 592 213 188 6 chr10 85965916 85966076 -59623212 - MER5A DNA MER1_type 0 189 1 2508 182 14 34 chr10 85966319 85966824 -59622464 + L1MB8 LINE L1 5682 6176 -2 890 306 96 22 chr10 85966844 85967430 -59621858 + L1MC4a LINE L1 5254 5882 -1926 776 179 0 15 chr10 85967437 85967571 -59621717 + FLAM_A SINE Alu 1 132 -1 328 293 31 89 chr10 85968776 85969105 -59620183 - L2 LINE L2 -220 3052 2744 511 326 173 50 chr10 85969134 85971000 -59618288 - L2 LINE L2 -755 2559 464 250 248 58 83 chr10 85971509 85971630 -59617658 - MIR3 SINE MIR -76 132 15 764 190 33 38 chr10 85972234 85972418 -59616870 - MIR SINE MIR 0 262 80 1303 149 193 28 chr10 85972477 85972726 -59616562 + AluJo SINE Alu 2 291 -11 1992 141 3 6 chr10 85972731 85973043 -59616245 + AluSx SINE Alu 1 311 -1 372 22 0 0 chr10 85973072 85973117 -59616171 + (CA)n Simple_repeat Simple_repeat 1 45 0 219 388 8 31 chr10 85973130 85973259 -59616029 - MIR SINE MIR -100 162 37 210 295 21 63 chr10 85973365 85973460 -59615828 + L3 LINE CR1 615 705 -872 228 322 34 17 chr10 85973681 85973799 -59615489 + MIR SINE MIR 21 140 -122 220 384 55 0 chr10 85974122 85974268 -59615020 + L3 LINE CR1 1321 1474 -103 590 263 30 31 chr10 85974429 85974629 -59614659 - MIR SINE MIR -56 206 10 287 192 0 0 chr10 85975435 85975487 -59613801 + MIR SINE MIR 95 146 -62 300 263 15 22 chr10 85976012 85976149 -59613139 + (TCTCTG)n Simple_repeat Simple_repeat 3 138 0 633 278 15 25 chr10 85977122 85977320 -59611968 + MIR3 SINE MIR 5 200 -8 187 209 47 0 chr10 85977593 85977636 -59611652 + MIR SINE MIR 127 171 -91 24 53 0 0 chr10 85978995 85979033 -59610255 + AT_rich Low_complexity Low_complexity 1 38 0 513 218 109 0 chr10 85980880 85981036 -59608252 - MER5B DNA MER1_type -5 173 1 355 230 126 100 chr10 85981102 85981341 -59607947 - Charlie8 DNA MER1_type -2172 245 1 188 200 0 0 chr10 85982428 85982463 -59606825 - MIR SINE MIR -174 88 54 379 190 2 56 chr10 85983723 85984192 -59605096 + (CA)n Simple_repeat Simple_repeat 1 443 0 483 217 0 48 chr10 85984237 85984426 -59604862 + (CA)n Simple_repeat Simple_repeat 1 180 0 381 255 0 43 chr10 85984452 85984636 -59604652 + (CA)n Simple_repeat Simple_repeat 1 176 0 371 243 6 40 chr10 85984653 85984826 -59604462 + (CA)n Simple_repeat Simple_repeat 1 167 0 196 207 8 33 chr10 85984838 85984959 -59604329 + (CA)n Simple_repeat Simple_repeat 1 118 0 499 228 22 22 chr10 85985023 85985203 -59604085 + (CA)n Simple_repeat Simple_repeat 1 180 0 289 299 23 28 chr10 85985128 85985305 -59603983 + (CACG)n Simple_repeat Simple_repeat 3 178 0 * 403 213 0 49 chr10 85985308 85985660 -59603628 + (CA)n Simple_repeat Simple_repeat 1 334 0 717 268 24 0 chr10 85986338 85986502 -59602786 - MIR SINE MIR -32 230 63 549 319 80 26 chr10 85987211 85987437 -59601851 + MIR SINE MIR 22 259 -3 330 132 0 0 chr10 85988210 85988263 -59601025 + (TG)n Simple_repeat Simple_repeat 2 54 0 1906 167 0 29 chr10 85988440 85988751 -59600537 - AluJb SINE Alu -10 302 1 2338 149 30 0 chr10 85988854 85989251 -59600037 - L1MA6 LINE L1 0 6300 5892 504 209 27 9 chr10 85989699 85989809 -59599479 + MER57A LTR ERV1 292 403 0 686 226 14 0 chr10 85989858 85990004 -59599284 + L1M4 LINE L1 2 149 -6710 1582 263 55 22 chr10 85990142 85990697 -59598591 + L1M4 LINE L1 169 804 -6055 * 1923 178 27 0 chr10 85990690 85991185 -59598103 + L1M4 LINE L1 5122 5630 -554 296 203 14 0 chr10 85991195 85991269 -59598019 + L1M4 LINE L1 2735 2809 -4329 653 253 48 42 chr10 85991269 85991435 -59597853 + AluJo SINE Alu 116 282 -30 364 77 31 0 chr10 85991439 85991504 -59597784 + (TA)n Simple_repeat Simple_repeat 1 67 0 477 118 26 0 chr10 85991504 85991580 -59597708 - L1M3 LINE L1 -771 5563 5486 631 225 70 19 chr10 85991600 85991813 -59597475 + L1M4 LINE L1 2846 3069 -4069 392 261 112 8 chr10 85991813 85991947 -59597341 + LTR41 LTR ERVL 1 148 -625 356 103 0 0 chr10 85991968 85992026 -59597262 - LTR5 LTR ERVK -165 804 747 392 233 0 16 chr10 85992029 85992158 -59597130 + LTR41 LTR ERVL 647 773 0 2156 121 3 13 chr10 85992729 85993059 -59596229 + AluSq SINE Alu 1 313 0 1098 184 25 25 chr10 85993066 85993107 -59596181 + AluJo SINE Alu 85 125 -187 218 0 94 0 chr10 85993107 85993139 -59596149 + A-rich Low_complexity Low_complexity 2 36 0 1098 184 25 25 chr10 85993139 85993298 -59595990 + AluJo SINE Alu 124 285 -27 2280 129 43 3 chr10 85993608 85993958 -59595330 - MER47A DNA MER2_type -1 365 2 4505 173 48 18 chr10 85993965 85995027 -59594261 - L1MB8 LINE L1 0 6247 5152 247 231 19 0 chr10 85995036 85995088 -59594200 + L1M4 LINE L1 4855 4907 -2050 247 243 14 0 chr10 85995092 85995166 -59594122 - L1MB8 LINE L1 -1076 5139 5065 1044 188 14 9 chr10 85995166 85995379 -59593909 - AluJo SINE Alu -3 309 96 7865 225 65 75 chr10 85995386 85996263 -59593025 - L1MB8 LINE L1 -1134 5081 4197 1581 171 6 70 chr10 85996263 85996579 -59592709 + AluJb SINE Alu 1 296 -16 7865 225 65 75 chr10 85996579 85998230 -59591058 - L1MB8 LINE L1 -2018 4197 2506 857 151 8 0 chr10 85998230 85998356 -59590932 - AluJb SINE Alu -180 132 6 7865 225 65 75 chr10 85998356 85998819 -59590469 - L1MB8 LINE L1 -3709 2506 2040 391 234 18 63 chr10 85998831 85998942 -59590346 - L1MCc LINE L1 -4109 3013 2908 2061 169 50 25 chr10 85998944 85999317 -59589971 + MLT1D LTR MaLR 54 441 -64 2197 115 0 0 chr10 85999317 85999637 -59589651 - AluSg1 SINE Alu 0 309 1 2061 169 50 25 chr10 85999637 85999701 -59589587 + MLT1D LTR MaLR 441 502 -3 1607 255 156 32 chr10 85999726 85999934 -59589354 - L1MCc LINE L1 -4201 2740 2559 1134 71 0 13 chr10 85999934 86000089 -59589199 - L1PA8 LINE L1 0 6172 6020 1607 255 156 32 chr10 86000089 86000431 -59588857 - L1MCc LINE L1 -4382 2559 2261 574 90 20 60 chr10 86000431 86000531 -59588757 + L1MA1 LINE L1 6207 6302 0 1607 255 156 32 chr10 86000531 86000712 -59588576 - L1MCc LINE L1 -4680 2261 2104 240 35 0 0 chr10 86000712 86000741 -59588547 + (TG)n Simple_repeat Simple_repeat 1 29 0 1607 255 156 32 chr10 86000741 86001325 -59587963 - L1MCc LINE L1 -4837 2104 1594 2465 117 28 58 chr10 86001325 86001752 -59587536 + MLT2D LTR ERVL 1 414 0 1607 255 156 32 chr10 86001752 86002095 -59587193 - L1MCc LINE L1 -5347 1594 867 236 342 26 43 chr10 86002107 86002224 -59587064 - L1MCc LINE L1 -5654 769 655 1195 236 133 47 chr10 86002293 86002633 -59586655 - L1MCc LINE L1 -5874 549 157 2375 96 3 6 chr10 86002633 86002945 -59586343 - AluSx SINE Alu -1 311 1 1195 236 133 47 chr10 86002945 86003070 -59586218 - L1MCc LINE L1 -6266 157 44 1662 197 26 103 chr10 86003212 86003239 -59586049 - MLT2B1 LTR ERVL -20 500 472 207 0 0 0 chr10 86003239 86003262 -59586026 + (TG)n Simple_repeat Simple_repeat 2 24 0 1662 197 26 103 chr10 86003262 86003750 -59585538 - MLT2B1 LTR ERVL -48 472 26 1637 194 17 14 chr10 86003750 86004043 -59585245 + AluJo SINE Alu 1 294 -18 1662 197 26 103 chr10 86004043 86004068 -59585220 - MLT2B1 LTR ERVL -494 26 1 285 29 0 0 chr10 86004689 86004723 -59584565 + (TG)n Simple_repeat Simple_repeat 2 35 0 183 80 0 0 chr10 86005171 86005196 -59584092 + (CCCCCG)n Simple_repeat Simple_repeat 5 29 0 310 307 8 24 chr10 86005329 86005456 -59583832 + MIR SINE MIR 29 153 -109 1784 150 8 4 chr10 86005841 86006107 -59583181 + AluJb SINE Alu 13 279 -33 240 267 92 53 chr10 86006866 86006997 -59582291 - MIR3 SINE MIR -54 154 19 239 304 27 62 chr10 86007195 86007307 -59581981 + MIR SINE MIR 85 192 -70 918 111 19 106 chr10 86008118 86008325 -59580963 + MER53 DNA DNA 1 189 0 565 200 80 40 chr10 86008765 86008890 -59580398 - MER94 DNA DNA 0 134 5 22 35 0 0 chr10 86009070 86009099 -59580189 + AT_rich Low_complexity Low_complexity 1 29 0 341 371 80 37 chr10 86009176 86009551 -59579737 + L2 LINE L2 1092 1482 -1832 403 322 197 16 chr10 86009584 86009951 -59579337 + L2 LINE L2 1606 2070 -1244 2285 178 43 17 chr10 86009951 86010366 -59578922 + MSTB LTR MaLR 1 426 0 403 322 197 16 chr10 86010366 86010445 -59578843 + L2 LINE L2 2070 2133 -1181 740 211 141 41 chr10 86010547 86010817 -59578471 - MLT1D LTR MaLR -120 385 89 345 292 93 19 chr10 86011273 86011434 -59577854 + L2 LINE L2 2881 3053 -219 209 189 132 0 chr10 86011610 86011663 -59577625 + L2 LINE L2 3213 3272 0 225 274 0 16 chr10 86012042 86012104 -59577184 + MLT1I LTR MaLR 347 407 -2 226 301 0 48 chr10 86012104 86012187 -59577101 - MIR3 SINE MIR -32 176 98 241 238 87 101 chr10 86012522 86012627 -59576661 - L1ME3A LINE L1 -204 5966 5861 895 161 87 19 chr10 86012627 86012788 -59576500 - FAM SINE Alu -3 172 1 241 238 87 101 chr10 86012788 86012968 -59576320 - L1ME3A LINE L1 -309 5861 5685 225 293 0 40 chr10 86013151 86013226 -59576062 + MIR SINE MIR 91 162 -100 1619 201 105 12 chr10 86013838 86014237 -59575051 - MER63B DNA MER1_type 0 436 1 22 0 0 0 chr10 86014445 86014467 -59574821 + AT_rich Low_complexity Low_complexity 1 22 0 396 284 76 41 chr10 86014507 86014704 -59574584 - L1ME4a LINE L1 -93 6028 5825 655 286 96 0 chr10 86014768 86014967 -59574321 + MIR SINE MIR 40 257 -5 683 341 59 34 chr10 86015089 86015447 -59573841 + L2 LINE L2 2341 2707 -607 453 188 138 0 chr10 86015454 86015592 -59573696 - MER112 DNA MER1_type -20 240 84 1874 150 7 0 chr10 86015659 86015953 -59573335 + MER1A DNA MER1_type 1 296 -233 445 65 0 0 chr10 86015964 86016026 -59573262 - LTR10D LTR ERV1 -451 62 1 * 1440 89 0 111 chr10 86016026 86016292 -59572996 + MER1A DNA MER1_type 297 532 -1 234 62 0 0 chr10 86016301 86016333 -59572955 + (TTTTA)n Simple_repeat Simple_repeat 2 33 0 2357 115 0 0 chr10 86016338 86016642 -59572646 - AluSx SINE Alu -5 307 4 1647 140 18 0 chr10 86017159 86017444 -59571844 + L1MA3 LINE L1 6014 6303 -2 229 313 21 21 chr10 86017745 86017841 -59571447 - MER117 DNA MER1_type -96 101 6 263 100 0 0 chr10 86017903 86017943 -59571345 - MADE1 DNA Mariner 0 80 41 344 131 0 36 chr10 86017983 86018067 -59571221 + (CA)n Simple_repeat Simple_repeat 2 82 0 248 286 104 0 chr10 86018106 86018183 -59571105 - MER91A DNA MER1_type -108 88 4 194 253 105 42 chr10 86018308 86018403 -59570885 + MIR SINE MIR 41 141 -121 3837 146 27 69 chr10 86018707 86018906 -59570382 - MER44D DNA MER2_type -1883 704 498 1810 150 3 40 chr10 86018906 86019206 -59570082 + AluJb SINE Alu 1 289 -23 3837 146 27 69 chr10 86019206 86019741 -59569547 - MER44D DNA MER2_type -2089 498 1 319 293 40 27 chr10 86020339 86020489 -59568799 - MLT1J LTR MaLR -2 509 358 375 143 24 12 chr10 86020501 86020585 -59568703 + CT-rich Low_complexity Low_complexity 2 86 0 1349 172 14 72 chr10 86020586 86020876 -59568412 - AluJb SINE Alu -39 273 1 287 114 23 0 chr10 86020929 86020973 -59568315 - MLT1J LTR MaLR -200 311 267 483 241 30 8 chr10 86020987 86021120 -59568168 - MLT1J LTR MaLR -351 160 25 3099 256 115 10 chr10 86021189 86021276 -59568012 - L2 LINE L2 -456 2858 2782 195 42 0 0 chr10 86021276 86021300 -59567988 + (GGGAGA)n Simple_repeat Simple_repeat 3 26 0 3099 256 115 10 chr10 86021300 86022152 -59567136 - L2 LINE L2 -532 2782 1820 565 319 101 23 chr10 86022155 86022541 -59566747 - L2 LINE L2 -716 2598 2183 2679 170 20 14 chr10 86022634 86023127 -59566161 + MLT2B2 LTR ERVL 1 496 -19 318 242 128 34 chr10 86023142 86023291 -59565997 - MIR SINE MIR -66 196 34 760 193 22 36 chr10 86024274 86024497 -59564791 + L1MB7 LINE L1 5087 5306 -840 1538 187 10 30 chr10 86024499 86024799 -59564489 + AluJo SINE Alu 1 294 -18 949 102 86 0 chr10 86024799 86024927 -59564361 + AluJb SINE Alu 1 139 -173 243 0 0 0 chr10 86024946 86024973 -59564315 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2768 32 3 0 chr10 86024984 86025294 -59563994 + AluY SINE Alu 1 311 0 3878 172 77 24 chr10 86025307 86025574 -59563714 + L1MB7 LINE L1 5271 5522 -662 2063 125 0 25 chr10 86025574 86025894 -59563394 + AluSx SINE Alu 1 312 0 3878 172 77 24 chr10 86025894 86026476 -59562812 + L1MB7 LINE L1 5522 6165 -19 2209 80 56 3 chr10 86026495 86026781 -59562507 + AluSx SINE Alu 1 301 -11 207 282 87 48 chr10 86027992 86028095 -59561193 - MIR SINE MIR -60 148 42 588 362 28 14 chr10 86028532 86028891 -59560397 + L3 LINE CR1 1189 1552 -25 1836 140 19 26 chr10 86028893 86029200 -59560088 + AluJb SINE Alu 1 305 -7 2451 43 0 3 chr10 86029727 86030033 -59559255 - AluY SINE Alu 0 305 1 1995 142 20 7 chr10 86030033 86030328 -59558960 - AluJb SINE Alu -13 299 1 588 266 53 74 chr10 86030410 86030654 -59558634 + LTR16C LTR ERVL 253 491 0 395 255 42 75 chr10 86030692 86030904 -59558384 + MLT1K LTR MaLR 368 572 -16 2130 151 0 0 chr10 86031001 86031306 -59557982 + AluJb SINE Alu 1 305 -7 419 291 190 5 chr10 86031317 86031535 -59557753 + MIR SINE MIR 2 262 0 2260 116 0 0 chr10 86031612 86031904 -59557384 - AluSg SINE Alu -18 292 1 965 253 12 32 chr10 86032006 86032255 -59557033 - MIR SINE MIR -2 260 17 2031 120 14 3 chr10 86033194 86033478 -59555810 + AluSx SINE Alu 1 287 -25 315 0 0 0 chr10 86033478 86033513 -59555775 + (GA)n Simple_repeat Simple_repeat 2 36 0 1704 207 0 3 chr10 86033691 86033996 -59555292 + AluJb SINE Alu 1 304 -8 881 280 49 20 chr10 86035151 86035501 -59553787 + HAL1 LINE L1 2 361 -2146 4613 160 57 10 chr10 86035503 86036421 -59552867 + L1MC3 LINE L1 5646 6606 -1179 1732 121 191 183 chr10 86036430 86036483 -59552805 + L1MC3 LINE L1 6824 6875 -910 378 61 0 0 chr10 86036483 86036532 -59552756 + (CA)n Simple_repeat Simple_repeat 2 50 0 1732 121 191 183 chr10 86036532 86036756 -59552532 + L1MC3 LINE L1 6875 7096 -689 342 264 28 9 chr10 86036756 86036862 -59552426 + MLT1F1 LTR MaLR 36 143 -424 1732 121 191 183 chr10 86036862 86037173 -59552115 + L1MC3 LINE L1 7096 7524 -261 2304 108 0 0 chr10 86037286 86037581 -59551707 + AluSg SINE Alu 1 295 -15 402 314 83 34 chr10 86037916 86038115 -59551173 + HAL1 LINE L1 351 560 -1943 2691 30 3 3 chr10 86038115 86038418 -59550870 + AluSq SINE Alu 1 303 -10 4396 134 24 1 chr10 86038455 86039173 -59550115 + L1MA8 LINE L1 5553 6286 -5 21 0 0 0 chr10 86039174 86039195 -59550093 + AT_rich Low_complexity Low_complexity 1 21 0 1550 186 13 60 chr10 86039197 86039515 -59549773 + AluJo SINE Alu 1 303 -9 991 225 215 27 chr10 86039520 86039710 -59549578 + HAL1 LINE L1 554 707 -1800 315 71 0 0 chr10 86039710 86039752 -59549536 + (CA)n Simple_repeat Simple_repeat 1 42 0 991 225 215 27 chr10 86039752 86040041 -59549247 + HAL1 LINE L1 707 1123 -1384 * 5376 160 28 18 chr10 86040027 86041155 -59548133 + L1MC2 LINE L1 5185 6327 -17 2231 96 3 3 chr10 86041155 86041446 -59547842 + AluSc SINE Alu 1 291 -18 5376 160 28 18 chr10 86041446 86041463 -59547825 + L1MC2 LINE L1 6327 6342 -2 3224 268 57 27 chr10 86041481 86042551 -59546737 + HAL1 LINE L1 1088 2211 -296 315 0 0 0 chr10 86042551 86042586 -59546702 + (TG)n Simple_repeat Simple_repeat 1 35 0 3224 268 57 27 chr10 86042586 86042893 -59546395 + HAL1 LINE L1 2211 2507 0 199 302 198 8 chr10 86042963 86043089 -59546199 - MIR SINE MIR -40 222 73 279 334 98 57 chr10 86043523 86043858 -59545430 - L2 LINE L2 0 3272 2924 926 167 69 0 chr10 86044114 86044288 -59545000 - AluJo SINE Alu -7 305 120 468 0 0 0 chr10 86044543 86044595 -59544693 + (TCTA)n Simple_repeat Simple_repeat 2 53 0 26 30 0 0 chr10 86045166 86045199 -59544089 + AT_rich Low_complexity Low_complexity 1 33 0 1754 174 11 0 chr10 86045208 86045489 -59543799 + AluJo SINE Alu 7 290 -22 910 182 13 7 chr10 86045742 86045896 -59543392 - FRAM SINE Alu -11 155 1 445 180 164 8 chr10 86046428 86046556 -59542732 + MER103 DNA DNA 2 149 -17 348 288 153 8 chr10 86046692 86046810 -59542478 - MER5A DNA MER1_type -48 141 7 300 181 74 31 chr10 86047467 86047559 -59541729 + L1MC4 LINE L1 5894 5992 -174 642 290 47 21 chr10 86047868 86048061 -59541227 - MIR SINE MIR -64 198 1 1084 233 119 27 chr10 86048254 86048623 -59540665 + MLT1I LTR MaLR 1 403 -6 238 271 161 17 chr10 86048661 86048779 -59540509 - L3 LINE CR1 -328 1249 1115 2426 85 7 0 chr10 86048850 86049157 -59540131 - AluY SINE Alu -2 309 1 304 315 22 0 chr10 86049344 86049436 -59539852 + MIR SINE MIR 59 152 -110 352 323 31 8 chr10 86050499 86050629 -59538659 - MIR3 SINE MIR -67 141 9 1724 164 7 3 chr10 86051090 86051376 -59537912 - AluJo SINE Alu -21 291 5 293 241 120 19 chr10 86051640 86051748 -59537540 + MIR3 SINE MIR 46 164 -44 2104 181 64 5 chr10 86052683 86053104 -59536184 - L1MB5 LINE L1 0 6174 5729 230 279 51 13 chr10 86053517 86053596 -59535692 - MIR SINE MIR -67 141 60 440 262 69 116 chr10 86054445 86054720 -59534568 - L2 LINE L2 -32 3281 3020 1238 66 7 0 chr10 86054920 86055072 -59534216 + AluY SINE Alu 146 298 -13 416 314 8 12 chr10 86055157 86055304 -59533984 + MIR SINE MIR 48 196 -12 310 255 103 21 chr10 86056240 86056385 -59532903 + LTR33 LTR ERVL 38 194 -327 380 231 87 12 chr10 86056480 86056653 -59532635 + LTR33 LTR ERVL 328 513 -8 1775 161 59 0 chr10 86056953 86057068 -59532220 + AluJb SINE Alu 1 108 -204 913 59 30 0 chr10 86057068 86057203 -59532085 + (GAAA)n Simple_repeat Simple_repeat 2 140 0 1775 161 59 0 chr10 86057203 86057373 -59531915 + AluJb SINE Alu 108 303 -9 442 337 165 21 chr10 86057460 86057751 -59531537 - L3 LINE CR1 -84 1493 1161 1749 125 25 14 chr10 86057801 86058081 -59531207 + Charlie3 DNA MER1_type 1 283 -2427 1144 175 4 17 chr10 86058103 86058337 -59530951 - L1 LINE L1 -2338 3808 3578 189 74 0 0 chr10 86058338 86058365 -59530923 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 229 309 109 0 chr10 86058417 86058592 -59530696 + L1ME LINE L1 5317 5510 -652 305 263 0 0 chr10 86059121 86059201 -59530087 + (CTGGGG)n Simple_repeat Simple_repeat 3 82 0 2173 126 3 0 chr10 86059243 86059537 -59529751 + AluSx SINE Alu 16 310 -2 511 341 44 31 chr10 86059540 86059857 -59529431 - L1M4 LINE L1 -797 5349 5029 345 274 0 0 chr10 86059858 86059964 -59529324 - L1MA10 LINE L1 -1 6333 6228 2120 104 0 17 chr10 86060038 86060348 -59528940 - AluSq SINE Alu 0 306 2 2273 132 0 0 chr10 86061311 86061622 -59527666 + AluSx SINE Alu 1 311 -1 333 299 10 42 chr10 86062139 86062402 -59526886 + CT-rich Low_complexity Low_complexity 1 254 0 315 182 39 19 chr10 86062558 86062712 -59526576 + CT-rich Low_complexity Low_complexity 2 158 0 227 222 56 11 chr10 86063117 86063207 -59526081 - L1ME3 LINE L1 -91 6071 5978 1609 206 0 22 chr10 86064799 86065115 -59524173 + AluJb SINE Alu 1 309 -3 275 287 66 53 chr10 86067768 86067954 -59521334 - MIR SINE MIR -54 208 16 22 0 0 0 chr10 86069196 86069218 -59520070 + AT_rich Low_complexity Low_complexity 1 22 0 315 0 0 0 chr10 86071791 86071826 -59517462 + (CGG)n Simple_repeat Simple_repeat 2 36 0 186 133 0 0 chr10 86072860 86072890 -59516398 + (GGGGA)n Simple_repeat Simple_repeat 1 30 0 189 309 73 0 chr10 86073170 86073238 -59516050 - L2 LINE L2 -52 3220 3148 440 198 0 10 chr10 86074650 86074751 -59514537 + L1MB2 LINE L1 6069 6168 -3 1844 173 99 19 chr10 86075974 86076397 -59512891 + LTR48 LTR ERV1 331 787 0 35 54 0 0 chr10 86076547 86076603 -59512685 + AT_rich Low_complexity Low_complexity 1 56 0 1200 141 84 14 chr10 86077143 86077356 -59511932 + MER30 DNA MER1_type 1 228 -2 1808 130 3 33 chr10 86077592 86077899 -59511389 + AluSq SINE Alu 5 302 -11 2063 101 0 0 chr10 86078268 86078545 -59510743 + AluSc SINE Alu 1 277 -32 341 336 49 36 chr10 86079685 86080132 -59509156 + L1M4 LINE L1 2470 2922 -3224 466 277 44 66 chr10 86080667 86080941 -59508347 + MER113 DNA MER1_type? 94 361 -160 197 191 0 24 chr10 86081731 86081773 -59507515 + MIR SINE MIR 140 180 -82 201 174 0 87 chr10 86082208 86082277 -59507011 + (TCTCTG)n Simple_repeat Simple_repeat 6 68 0 243 255 11 58 chr10 86082330 86082518 -59506770 + (TG)n Simple_repeat Simple_repeat 2 180 0 222 37 0 0 chr10 86082553 86082580 -59506708 + (TG)n Simple_repeat Simple_repeat 1 27 0 2138 129 0 0 chr10 86083766 86084077 -59505211 + AluSq SINE Alu 3 313 0 583 267 88 26 chr10 86084454 86084727 -59504561 + MLT1I LTR MaLR 75 364 -45 576 290 61 30 chr10 86084817 86085048 -59504240 + MIR SINE MIR 21 258 -4 462 283 33 0 chr10 86085343 86085495 -59503793 - MER112 DNA MER1_type -103 157 1 1840 170 3 0 chr10 86086003 86086309 -59502979 + AluSq SINE Alu 5 311 -2 331 269 82 86 chr10 86086313 86086628 -59502660 + L1M3de LINE L1 916 1231 -4934 1672 119 6 103 chr10 86086628 86086947 -59502341 + AluSx SINE Alu 1 288 -24 2166 105 0 6 chr10 86086955 86087235 -59502053 + AluY SINE Alu 1 280 -31 324 0 0 0 chr10 86087235 86087271 -59502017 + (CAA)n Simple_repeat Simple_repeat 1 36 0 2166 105 0 6 chr10 86087271 86087303 -59501985 + AluY SINE Alu 280 311 0 331 269 82 86 chr10 86087303 86087642 -59501646 + L1M3de LINE L1 1238 1552 -4613 394 257 192 5 chr10 86087794 86088008 -59501280 + L1M3de LINE L1 3215 3468 -2661 804 121 0 0 chr10 86088056 86088172 -59501116 + AluJb SINE Alu 1 116 -196 912 276 76 71 chr10 86088190 86088393 -59500895 + L1ME LINE L1 4266 4466 -1680 1899 148 3 3 chr10 86088393 86088703 -59500585 + AluSx SINE Alu 1 310 -2 912 276 76 71 chr10 86088703 86088755 -59500533 + L1ME LINE L1 4466 4516 -1630 1985 126 3 0 chr10 86088755 86089049 -59500239 - L1PA13 LINE L1 -7 6156 5862 912 276 76 71 chr10 86089049 86089147 -59500141 + L1ME LINE L1 4516 4612 -1534 1951 117 0 23 chr10 86089147 86089447 -59499841 - AluSx SINE Alu -6 306 14 912 276 76 71 chr10 86089447 86089879 -59499409 + L1ME LINE L1 4612 5040 -1106 2064 126 0 0 chr10 86089879 86090173 -59499115 - AluSx SINE Alu -18 294 1 912 276 76 71 chr10 86090173 86090242 -59499046 + L1ME LINE L1 5040 5107 -1039 1249 252 90 77 chr10 86090242 86090585 -59498703 - MLT1E1 LTR MaLR 0 654 298 1847 136 0 20 chr10 86090585 86090908 -59498380 + AluSx SINE Alu 1 312 0 1249 252 90 77 chr10 86090908 86091210 -59498078 - MLT1E1 LTR MaLR -356 298 1 912 276 76 71 chr10 86091210 86091347 -59497941 + L1ME LINE L1 5107 5270 -876 1636 183 3 3 chr10 86091347 86091636 -59497652 - AluJo SINE Alu -22 290 2 912 276 76 71 chr10 86091636 86091726 -59497562 + L1ME LINE L1 5270 5358 -788 2130 123 0 13 chr10 86091763 86092079 -59497209 - AluSx SINE Alu 0 312 1 715 231 104 37 chr10 86092239 86092538 -59496750 + LTR48B LTR ERV1 255 573 -71 3835 125 56 50 chr10 86092634 86092778 -59496510 - MER50 LTR ERV1 -23 711 569 1818 117 0 53 chr10 86092778 86093104 -59496184 + AluSx SINE Alu 1 310 0 3835 125 56 50 chr10 86093104 86093656 -59495632 - MER50 LTR ERV1 -165 569 10 380 254 57 131 chr10 86093658 86093821 -59495467 + L1ME LINE L1 5514 5649 -521 1669 162 0 51 chr10 86093821 86094136 -59495152 + AluJb SINE Alu 12 310 -2 380 254 57 131 chr10 86094136 86094255 -59495033 + L1ME LINE L1 5649 5775 -395 272 245 237 36 chr10 86094597 86094736 -59494552 - MIR3 SINE MIR -33 175 9 190 259 0 52 chr10 86094755 86094813 -59494475 + L2 LINE L2 3200 3254 -18 7928 19 1 0 chr10 86094857 86096530 -59492758 + L1PA3 LINE L1 4475 6155 0 2176 108 0 3 chr10 86096845 86097151 -59492137 - AluSx SINE Alu -7 305 1 442 181 50 131 chr10 86097632 86097831 -59491457 - MER117 DNA MER1_type -3 194 12 539 256 143 25 chr10 86097867 86098070 -59491218 - MIR SINE MIR -8 254 28 492 258 137 33 chr10 86098220 86098402 -59490886 - L2 LINE L2 -1 3312 3112 435 326 19 51 chr10 86098388 86098603 -59490685 - L2 LINE L2 -3071 243 36 * 2010 105 29 38 chr10 86098793 86099067 -59490221 + AluSx SINE Alu 2 274 -38 792 83 0 0 chr10 86099067 86099176 -59490112 + (CAATA)n Simple_repeat Simple_repeat 2 110 0 2010 105 29 38 chr10 86099176 86099215 -59490073 + AluSx SINE Alu 274 312 0 2098 124 0 6 chr10 86099215 86099530 -59489758 + AluSq SINE Alu 1 313 0 5201 80 28 0 chr10 86099731 86100403 -59488885 - LTR8 LTR ERV1 0 691 1 736 202 48 21 chr10 86100915 86101103 -59488185 + LTR41 LTR ERVL 1 193 -580 446 233 128 83 chr10 86101361 86101615 -59487673 + LTR41 LTR ERVL 510 795 0 401 327 13 19 chr10 86101912 86102071 -59487217 - MIR SINE MIR -93 169 12 427 345 100 9 chr10 86102087 86102307 -59486981 - MIR SINE MIR -21 241 2 201 74 0 0 chr10 86102528 86102555 -59486733 + (CCCTAA)n Simple_repeat Simple_repeat 2 28 0 309 331 17 40 chr10 86103652 86103827 -59485461 + L1M4 LINE L1 3047 3217 -2929 2305 140 72 37 chr10 86104839 86105267 -59484021 - MSTB2 LTR MaLR 0 457 15 409 162 0 0 chr10 86105268 86105336 -59483952 - MER81 DNA DNA -45 69 2 743 323 97 44 chr10 86105336 86106170 -59483118 - HAL1 LINE L1 -1629 878 1 294 279 54 65 chr10 86106147 86106423 -59482865 - L1MEd LINE L1 -4931 1205 933 * 594 208 40 132 chr10 86106572 86106822 -59482466 + MIR SINE MIR 32 258 -4 224 367 29 7 chr10 86107596 86107735 -59481553 - L2 LINE L2 -213 3059 2918 978 128 0 0 chr10 86107886 86108019 -59481269 + FLAM_C SINE Alu 1 133 0 357 346 20 69 chr10 86108051 86108253 -59481035 - L2 LINE L2 -621 2693 2502 289 246 0 0 chr10 86108352 86108417 -59480871 + MER69 DNA AcHobo 107 171 -1055 * 2083 245 110 11 chr10 86108413 86109325 -59479963 - MER69 DNA AcHobo -429 2097 159 228 229 33 49 chr10 86109327 86109388 -59479900 + MER7A DNA MER2_type 1 60 -288 1772 187 0 0 chr10 86109506 86109806 -59479482 + MER7A DNA MER2_type 49 346 0 635 187 8 24 chr10 86109809 86109932 -59479356 - MER69 DNA AcHobo -2371 155 35 308 268 12 0 chr10 86111005 86111087 -59478201 - MIR SINE MIR -88 174 92 632 215 61 6 chr10 86112440 86112603 -59476685 - MER53 DNA DNA 0 189 18 2114 109 0 16 chr10 86112605 86112918 -59476370 - AluSg SINE Alu -2 308 1 186 348 49 73 chr10 86113056 86113303 -59475985 + L2 LINE L2 2601 2841 -473 335 304 62 83 chr10 86113458 86113558 -59475730 + L1M4 LINE L1 4154 4255 -1891 2027 131 10 0 chr10 86113558 86113864 -59475424 + AluSx SINE Alu 1 309 -3 335 304 62 83 chr10 86113864 86114039 -59475249 + L1M4 LINE L1 4255 4423 -1723 1882 196 22 0 chr10 86114102 86114460 -59474828 + MER47A DNA MER2_type 1 366 0 446 320 47 39 chr10 86115228 86115462 -59473826 + MIR SINE MIR 14 249 -13 284 186 29 29 chr10 86115538 86115608 -59473680 - MIR SINE MIR -108 154 85 240 303 53 0 chr10 86116153 86116229 -59473059 + MIR3 SINE MIR 82 161 -47 239 280 129 0 chr10 86117069 86117162 -59472126 - L2 LINE L2 0 3272 3168 309 275 8 75 chr10 86119042 86119162 -59470126 + MIR3 SINE MIR 15 126 -82 222 282 58 29 chr10 86120759 86120862 -59468426 + MIR3 SINE MIR 9 114 -94 1538 288 95 13 chr10 86120917 86121267 -59468021 - L1MC4 LINE L1 -139 7903 7583 189 0 0 0 chr10 86121267 86121288 -59468000 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 1538 288 95 13 chr10 86121288 86121545 -59467743 - L1MC4 LINE L1 -459 7583 7246 196 293 38 57 chr10 86122262 86122368 -59466920 - MIR SINE MIR -78 184 81 219 250 28 14 chr10 86122592 86122664 -59466624 + (TA)n Simple_repeat Simple_repeat 1 73 0 327 104 0 0 chr10 86122937 86122985 -59466303 + (CA)n Simple_repeat Simple_repeat 2 49 0 11381 162 14 21 chr10 86123170 86124103 -59465185 - L1MA5 LINE L1 0 7002 6064 1537 188 7 0 chr10 86124103 86124391 -59464897 - AluJo SINE Alu -22 290 1 11381 162 14 21 chr10 86124391 86125672 -59463616 - L1MA5 LINE L1 -938 6064 4817 2237 79 3 31 chr10 86125672 86125990 -59463298 + AluSx SINE Alu 1 309 -3 11381 162 14 21 chr10 86125990 86126900 -59462388 - L1MA5 LINE L1 -2185 4817 3902 1190 203 36 33 chr10 86126911 86127216 -59462072 + AluJo SINE Alu 7 312 0 4183 204 47 6 chr10 86127221 86128800 -59460488 - L1MA5 LINE L1 -2942 3906 2257 1091 294 42 21 chr10 86129156 86129632 -59459656 - L1ME3A LINE L1 0 6170 5685 38513 76 18 10 chr10 86129702 86135814 -59453474 + L1PA6 LINE L1 11 6170 0 373 252 87 0 chr10 86135818 86135933 -59453355 - L1ME3A LINE L1 -578 5586 5462 477 184 0 0 chr10 86135936 86136023 -59453265 + L1MC1 LINE L1 1358 1444 -4940 6311 204 30 5 chr10 86136224 86138691 -59450597 + L1MC1 LINE L1 4040 6569 0 22 35 0 0 chr10 86138691 86138720 -59450568 + AT_rich Low_complexity Low_complexity 1 29 0 1269 233 77 14 chr10 86138720 86139149 -59450139 + L1M4 LINE L1 4317 4772 -1374 1101 158 47 0 chr10 86139152 86139367 -59449921 + L1MA8 LINE L1 6067 6291 0 744 249 11 0 chr10 86139788 86139973 -59449315 + L1M4 LINE L1 4762 4948 -1198 282 253 0 0 chr10 86139980 86140063 -59449225 + GA-rich Low_complexity Low_complexity 4 86 0 1745 164 29 23 chr10 86140064 86140374 -59448914 + AluSx SINE Alu 1 312 0 746 186 22 28 chr10 86140379 86140693 -59448595 + GA-rich Low_complexity Low_complexity 1 312 0 1482 218 22 8 chr10 86140731 86141094 -59448194 + L1M4 LINE L1 4967 5334 -812 1533 220 17 25 chr10 86141204 86141563 -59447725 - MLT1A1 LTR MaLR 0 365 10 353 287 32 38 chr10 86142308 86142552 -59446736 + MIR SINE MIR 4 243 -19 267 175 0 0 chr10 86144336 86144393 -59444895 + (CA)n Simple_repeat Simple_repeat 2 58 0 503 289 99 47 chr10 86144614 86144978 -59444310 + L2 LINE L2 2931 3313 0 384 322 95 52 chr10 86145718 86146119 -59443169 + L1MEd LINE L1 366 783 -5336 27 29 0 0 chr10 86146186 86146220 -59443068 + AT_rich Low_complexity Low_complexity 1 34 0 225 191 119 48 chr10 86146386 86146470 -59442818 + MLT1J1 LTR MaLR 75 164 -282 2284 105 3 0 chr10 86146753 86147047 -59442241 + AluSx SINE Alu 3 297 -15 277 132 0 0 chr10 86147513 86147551 -59441737 - Alu SINE Alu -263 40 3 390 272 196 5 chr10 86147670 86147854 -59441434 + MIR SINE MIR 15 233 -29 248 257 14 0 chr10 86147876 86147950 -59441338 + L1M4 LINE L1 3787 3861 -2285 805 31 0 0 chr10 86148752 86148848 -59440440 + L1PA4 LINE L1 6058 6153 -2 * 17448 73 0 0 chr10 86148818 86151910 -59437378 + L1PA6 LINE L1 3044 6145 -9 22 35 0 0 chr10 86152031 86152060 -59437228 + AT_rich Low_complexity Low_complexity 1 29 0 2108 170 14 0 chr10 86152171 86152529 -59436759 + MER47A DNA MER2_type 4 366 0 430 335 30 30 chr10 86153325 86153561 -59435727 + MIR SINE MIR 14 249 -13 222 145 145 14 chr10 86153638 86153707 -59435581 - MIR SINE MIR -108 154 77 183 333 53 0 chr10 86154234 86154309 -59434979 + MIR3 SINE MIR 82 160 -48 10669 174 77 65 chr10 86155345 86155960 -59433328 + L1MA5 LINE L1 2420 3026 -3274 2162 122 3 7 chr10 86155960 86156264 -59433024 + AluSp SINE Alu 1 303 -10 10669 174 77 65 chr10 86156264 86156334 -59432954 + L1MA5 LINE L1 3026 3094 -3206 1558 197 17 17 chr10 86156334 86156634 -59432654 - AluJo SINE Alu -12 300 1 10669 174 77 65 chr10 86156634 86157118 -59432170 + L1MA5 LINE L1 3094 3571 -2729 3224 139 14 2 chr10 86157118 86157606 -59431682 - LOR1a LTR ERV1 -1 496 3 10669 174 77 65 chr10 86157606 86158471 -59430817 + L1MA5 LINE L1 3571 4424 -1876 749 157 7 82 chr10 86158471 86158581 -59430707 + FLAM_C SINE Alu 4 102 -210 3800 177 162 36 chr10 86158581 86159532 -59429756 + MER11C LTR ERVK 1 1071 0 749 157 7 82 chr10 86159532 86159568 -59429720 + FLAM_C SINE Alu 102 139 -173 10669 174 77 65 chr10 86159568 86161217 -59428071 + L1MA5 LINE L1 4424 6298 -2 264 240 27 13 chr10 86161748 86161823 -59427465 + (TA)n Simple_repeat Simple_repeat 2 77 0 2215 131 10 34 chr10 86162312 86162327 -59426961 - HUERS-P2 LTR ERV1 -1 3087 3073 4236 171 59 6 chr10 86162327 86163112 -59426176 - LTR1B LTR ERV1 0 826 1 2215 131 10 34 chr10 86163112 86163461 -59425827 - HUERS-P2 LTR ERV1 -15 3073 669 8286 148 50 8 chr10 86163461 86164752 -59424536 - HUERS-P2 LTR ERV1 -494 6597 5253 2200 116 0 0 chr10 86164755 86165048 -59424240 + MER52-int LTR ERV1 4904 5196 -1895 616 122 0 0 chr10 86165056 86165146 -59424142 - HUERS-P2 LTR ERV1 -1818 5273 5184 * 15888 176 15 17 chr10 86165139 86167877 -59421411 - HUERS-P2 LTR ERV1 -2875 4216 1544 306 278 41 10 chr10 86168093 86168190 -59421098 - MER97c DNA MER1_type? -855 235 136 1633 289 66 17 chr10 86168338 86168977 -59420311 + L1MC4 LINE L1 7239 7908 -134 224 301 36 10 chr10 86169024 86169152 -59420136 - MIR SINE MIR -71 137 9 281 258 8 75 chr10 86170762 86170882 -59418406 - MIR3 SINE MIR -82 126 15 198 320 53 0 chr10 86173708 86173783 -59415505 - MIR3 SINE MIR -47 161 83 419 330 47 34 chr10 86174461 86174694 -59414594 - MIR SINE MIR -13 249 14 1830 194 19 6 chr10 86175441 86175801 -59413487 - MER47A DNA MER2_type 0 366 2 14223 202 32 9 chr10 86175843 86178767 -59410521 - L1PA12 LINE L1 -2232 5352 968 185 81 0 27 chr10 86178767 86178804 -59410484 + (TTG)n Simple_repeat Simple_repeat 2 37 0 14223 202 32 9 chr10 86178804 86179786 -59409502 - L1PA12 LINE L1 -6616 968 11 1408 69 21 0 chr10 86180037 86180061 -59409227 + L1P LINE L1 2122 2144 -4002 7826 21 0 0 chr10 86180061 86181137 -59408151 - L1PA4 LINE L1 -3 6152 5075 1408 69 21 0 chr10 86181137 86181301 -59407987 + L1P LINE L1 2144 2314 -3832 5452 163 51 7 chr10 86181391 86182718 -59406570 + L1P4 LINE L1 4215 5591 -572 6236 57 3 0 chr10 86182718 86183490 -59405798 + L1PA7 LINE L1 5367 6141 -13 2130 282 81 18 chr10 86183550 86184101 -59405187 - L1M4 LINE L1 -2409 3737 3222 2159 159 0 0 chr10 86184101 86184446 -59404842 - L1PA16 LINE L1 -18 6148 5804 2130 282 81 18 chr10 86184446 86185141 -59404147 - L1M4 LINE L1 -2924 3222 2413 1154 102 1 2 chr10 86185186 86185360 -59403928 + L1P4 LINE L1 5593 5762 -412 263 211 84 0 chr10 86185460 86185531 -59403757 - L1M4 LINE L1 -2283 3863 3787 488 308 76 5 chr10 86185570 86185755 -59403533 - MIR SINE MIR -63 199 2 366 325 68 49 chr10 86185924 86186232 -59403056 - L1M4 LINE L1 -2572 3574 3261 309 283 58 43 chr10 86186674 86186812 -59402476 - L1M4 LINE L1 -2912 3234 3095 213 41 82 41 chr10 86186816 86186865 -59402423 + (TAAA)n Simple_repeat Simple_repeat 4 54 0 372 244 78 17 chr10 86188036 86188151 -59401137 - L2 LINE L2 0 3313 3192 342 143 0 0 chr10 86188466 86188529 -59400759 + (TG)n Simple_repeat Simple_repeat 2 64 0 2208 86 3 29 chr10 86191366 86191679 -59397609 + AluY SINE Alu 2 306 -5 2219 160 54 31 chr10 86192184 86192608 -59396680 - Tigger2a DNA MER2_type 0 434 1 276 77 0 0 chr10 86192738 86192777 -59396511 + (TG)n Simple_repeat Simple_repeat 1 39 0 217 146 24 0 chr10 86192933 86192974 -59396314 + (CA)n Simple_repeat Simple_repeat 1 42 0 29 28 0 0 chr10 86193090 86193126 -59396162 + AT_rich Low_complexity Low_complexity 1 36 0 595 271 0 7 chr10 86193247 86193387 -59395901 - MLT1F LTR MaLR -399 143 5 382 294 87 77 chr10 86193435 86193721 -59395567 - MLT1F-int LTR MaLR -60 1311 1023 25 51 0 0 chr10 86194385 86194424 -59394864 + AT_rich Low_complexity Low_complexity 1 39 0 232 329 151 9 chr10 86194490 86194715 -59394573 - L2 LINE L2 -10 3303 3047 1049 155 18 0 chr10 86194811 86194979 -59394309 + ERVL-B1 LTR ERVL 5587 5757 -7 1440 257 115 13 chr10 86194979 86195449 -59393839 + MLT2B1 LTR ERVL 1 518 -2 1669 243 27 46 chr10 86195521 86196002 -59393286 - MLT2B1 LTR ERVL -48 472 1 1578 158 17 14 chr10 86196002 86196293 -59392995 - ERVL-B1 LTR ERVL -7 5757 5466 * 3543 188 36 6 chr10 86196272 86196930 -59392358 - ERVL-B1 LTR ERVL -886 4878 4201 5949 218 138 18 chr10 86196945 86198305 -59390983 - MER52A LTR ERV1 -232 1523 1 9638 102 14 2 chr10 86198305 86199629 -59389659 + MER57A-int LTR ERV1 5810 7148 -389 567 152 105 0 chr10 86199629 86199734 -59389554 + LTR54B LTR ERV1 3 118 -380 1250 113 204 9 chr10 86199757 86199978 -59389310 + MER57A-int LTR ERV1 7274 7537 0 1817 173 86 5 chr10 86199978 86200349 -59388939 + MER57A LTR ERV1 1 401 -2 665 276 100 17 chr10 86201934 86202173 -59387115 - MLT1L LTR MaLR -33 582 324 447 306 56 60 chr10 86202469 86202721 -59386567 + L2 LINE L2 719 969 -2345 806 249 92 29 chr10 86202721 86202994 -59386294 - MLT1L LTR MaLR -324 291 2 321 348 12 37 chr10 86203124 86203288 -59386000 + MIR SINE MIR 49 208 -54 822 177 0 49 chr10 86203888 86204052 -59385236 + AluSc SINE Alu 128 283 -26 2539 32 0 10 chr10 86204541 86204849 -59384439 + AluY SINE Alu 1 305 -6 1464 196 38 46 chr10 86205260 86205632 -59383656 - MLT1A2 LTR MaLR 0 374 6 283 319 0 0 chr10 86207620 86207714 -59381574 + C-rich Low_complexity Low_complexity 1 94 0 259 170 22 39 chr10 86209237 86209419 -59379869 + (CA)n Simple_repeat Simple_repeat 2 180 0 855 249 90 34 chr10 86211858 86212212 -59377076 + MLT1A2 LTR MaLR 1 374 0 251 302 103 0 chr10 86212930 86213056 -59376232 - MIR SINE MIR -31 231 93 658 244 57 122 chr10 86219870 86220329 -59368959 - MER63C DNA MER1_type -419 511 83 2177 90 0 0 chr10 86220575 86220854 -59368434 + AluSx SINE Alu 1 279 -33 1302 223 96 47 chr10 86222655 86223081 -59366207 - MER101 LTR ERV1 -19 455 9 1296 209 34 4 chr10 86223356 86223624 -59365664 - LTR43 LTR ERV1 -132 470 195 746 219 49 34 chr10 86223951 86224156 -59365132 - MER63A DNA MER1_type -2 208 1 2233 99 3 3 chr10 86225890 86226202 -59363086 - AluSx SINE Alu 0 312 1 852 254 44 44 chr10 86227825 86228073 -59361215 + MIR SINE MIR 10 257 -5 284 315 56 0 chr10 86228362 86228470 -59360818 + MLT1H LTR MaLR 410 523 -26 197 305 12 37 chr10 86228603 86228685 -59360603 + L2 LINE L2 2231 2310 -1004 2423 90 0 0 chr10 86228815 86229126 -59360162 + AluY SINE Alu 1 311 0 572 328 80 13 chr10 86229224 86229538 -59359750 - LTR16A LTR ERVL -95 355 21 482 311 197 3 chr10 86230183 86230472 -59358816 - MLT1I LTR MaLR 0 409 65 1920 101 14 28 chr10 86234101 86234423 -59354865 - AluSq SINE Alu 0 318 1 1193 183 84 22 chr10 86237345 86237619 -59351669 - AluJb SINE Alu -11 291 1 730 263 96 47 chr10 86237691 86238285 -59351003 - L1M4 LINE L1 -907 5239 4617 1392 268 73 54 chr10 86238576 86239329 -59349959 - L1M4 LINE L1 -2638 3508 2722 631 64 11 11 chr10 86239329 86239423 -59349865 + (TCTA)n Simple_repeat Simple_repeat 1 94 0 1392 268 73 54 chr10 86239423 86239852 -59349436 - L1M4 LINE L1 -3424 2722 2303 184 30 61 0 chr10 86239901 86239934 -59349354 + (TAGA)n Simple_repeat Simple_repeat 4 38 0 308 294 63 0 chr10 86239948 86240105 -59349183 - L1MC4 LINE L1 -1337 6705 6586 228 213 0 0 chr10 86240129 86240190 -59349098 + (TA)n Simple_repeat Simple_repeat 1 61 0 231 240 0 62 chr10 86240193 86240289 -59348999 + L1MC4 LINE L1 6614 6703 -1339 2564 114 0 10 chr10 86240488 86240875 -59348413 + L1PA13 LINE L1 5777 6159 -4 846 139 0 0 chr10 86240966 86241103 -59348185 + AluSg/x SINE Alu 168 304 -8 286 188 0 0 chr10 86241947 86242011 -59347277 - L1MA1 LINE L1 0 6302 6239 22 0 0 0 chr10 86242430 86242452 -59346836 + AT_rich Low_complexity Low_complexity 1 22 0 1664 71 9 0 chr10 86242992 86243218 -59346070 + L1PA6 LINE L1 5920 6147 -7 258 338 93 34 chr10 86243409 86243613 -59345675 - MLT1J LTR MaLR -272 239 24 1518 246 77 48 chr10 86243722 86244506 -59344782 + L1ME1 LINE L1 4985 5788 -378 360 0 0 0 chr10 86244520 86244560 -59344728 + (CA)n Simple_repeat Simple_repeat 1 40 0 3900 201 62 37 chr10 86244568 86245872 -59343416 + L1MC2 LINE L1 4901 6333 -11 700 278 55 29 chr10 86245871 86246216 -59343072 + L1ME1 LINE L1 5811 6164 -2 * 21 36 0 0 chr10 86246715 86246743 -59342545 + AT_rich Low_complexity Low_complexity 1 28 0 2483 46 0 3 chr10 86248176 86248479 -59340809 + AluY SINE Alu 1 302 -9 26 0 0 0 chr10 86248727 86248753 -59340535 + AT_rich Low_complexity Low_complexity 1 26 0 458 58 16 277 chr10 86249516 86249704 -59339584 - L1MA8 LINE L1 -143 6148 6010 28 48 0 0 chr10 86249725 86249767 -59339521 + AT_rich Low_complexity Low_complexity 1 42 0 384 256 26 51 chr10 86249903 86250020 -59339268 - MER5B DNA MER1_type -6 172 59 946 282 21 6 chr10 86250080 86250420 -59338868 - L1MCa LINE L1 -3516 3128 2784 1058 224 67 58 chr10 86250424 86250737 -59338551 - L1MCa LINE L1 -6101 543 228 195 42 0 0 chr10 86250836 86250860 -59338428 + (A)n Simple_repeat Simple_repeat 1 24 0 261 331 71 80 chr10 86250868 86251318 -59337970 + L2 LINE L2 2827 3272 0 27 49 0 0 chr10 86252436 86252477 -59336811 + AT_rich Low_complexity Low_complexity 1 41 0 661 271 17 17 chr10 86252479 86252660 -59336628 - MIR SINE MIR -24 238 58 25 0 0 0 chr10 86252727 86252752 -59336536 + AT_rich Low_complexity Low_complexity 1 25 0 24 67 0 0 chr10 86252958 86253003 -59336285 + AT_rich Low_complexity Low_complexity 1 45 0 27 49 0 0 chr10 86254822 86254863 -59334425 + AT_rich Low_complexity Low_complexity 1 41 0 932 252 126 64 chr10 86255169 86255606 -59333682 + MLT1C LTR MaLR 1 464 -3 1436 213 56 69 chr10 86255838 86256213 -59333075 + MLT1A2 LTR MaLR 1 370 -4 250 313 28 49 chr10 86256899 86257043 -59332245 + MLT1L LTR MaLR 451 591 -24 2255 59 0 36 chr10 86257104 86257410 -59331878 + AluY SINE Alu 1 295 -16 367 169 0 14 chr10 86257438 86257509 -59331779 - L1MC1 LINE L1 -10 6323 6254 242 180 16 0 chr10 86257603 86257664 -59331624 + (CA)n Simple_repeat Simple_repeat 2 63 0 36 0 0 0 chr10 86257678 86257714 -59331574 + AT_rich Low_complexity Low_complexity 1 36 0 1949 199 53 36 chr10 86257721 86258273 -59331015 - L1MB4 LINE L1 -2 6178 5710 241 282 60 26 chr10 86258362 86258478 -59330810 - L1M4c LINE L1 -6250 396 22 999 286 105 67 chr10 86259625 86259929 -59329359 - L2 LINE L2 0 3313 3022 2313 132 5 16 chr10 86259929 86260308 -59328980 + THE1C LTR MaLR 1 375 0 999 286 105 67 chr10 86260308 86260393 -59328895 - L2 LINE L2 -291 3022 2942 1607 219 11 37 chr10 86260393 86260768 -59328520 + MLT1A1 LTR MaLR 1 365 0 999 286 105 67 chr10 86260768 86261135 -59328153 - L2 LINE L2 -371 2942 2522 809 331 150 19 chr10 86261139 86261765 -59327523 - L2 LINE L2 -2295 1019 312 197 328 106 32 chr10 86261759 86261948 -59327340 - MIR SINE MIR -17 245 43 * 38 0 0 0 chr10 86261988 86262026 -59327262 + AT_rich Low_complexity Low_complexity 1 38 0 247 354 83 0 chr10 86262085 86262181 -59327107 + MIR SINE MIR 47 150 -112 26 30 0 0 chr10 86262335 86262368 -59326920 + AT_rich Low_complexity Low_complexity 1 33 0 340 345 35 0 chr10 86262407 86262552 -59326736 - L1ME3 LINE L1 -17 6145 5996 1109 283 45 12 chr10 86262573 86262997 -59326291 - L1ME3 LINE L1 -245 5919 5482 732 143 0 17 chr10 86263003 86263122 -59326166 - FRAM SINE Alu -19 157 41 558 287 22 3 chr10 86263123 86263417 -59325871 - L1ME3 LINE L1 -669 5493 5191 * 4528 170 41 5 chr10 86263414 86264285 -59325003 - L1MB1 LINE L1 0 6168 5266 380 274 61 30 chr10 86264342 86264506 -59324782 - L1MB1 LINE L1 -1012 5134 4966 243 237 96 156 chr10 86264653 86264788 -59324500 - MER5B DNA MER1_type -2 176 50 844 207 0 0 chr10 86264797 86264942 -59324346 - FRAM SINE Alu -30 146 2 267 254 16 0 chr10 86264943 86265006 -59324282 - MER5B DNA MER1_type -114 64 1 24 53 0 0 chr10 86266731 86266769 -59322519 + AT_rich Low_complexity Low_complexity 1 38 0 579 234 152 17 chr10 86266821 86267024 -59322264 - L1MB1 LINE L1 -1546 4600 4361 1204 207 3 53 chr10 86267024 86267328 -59321960 - AluJo SINE Alu -23 289 1 579 234 152 17 chr10 86267328 86267360 -59321928 - L1MB1 LINE L1 -1785 4361 4335 2329 248 61 56 chr10 86267361 86268247 -59321041 - L1MB1 LINE L1 -1997 4149 3254 2199 123 10 0 chr10 86268247 86268557 -59320731 - AluSq SINE Alu 0 313 1 2329 248 61 56 chr10 86268557 86268802 -59320486 - L1MB1 LINE L1 -2892 3254 3012 * 4233 222 15 18 chr10 86268782 86269792 -59319496 - L1MD1 LINE L1 0 6242 5236 307 314 29 19 chr10 86269776 86269881 -59319407 - L1MDa LINE L1 -5549 991 886 * 215 238 0 0 chr10 86270095 86270137 -59319151 + T-rich Low_complexity Low_complexity 3 44 0 1387 106 48 5 chr10 86270345 86270553 -59318735 - AluSp SINE Alu 0 313 97 7516 245 79 38 chr10 86270581 86272779 -59316509 + L1M4c LINE L1 1434 3861 -2521 2385 61 0 0 chr10 86272779 86273076 -59316212 - AluY SINE Alu -7 304 8 7516 245 79 38 chr10 86273076 86274837 -59314451 + L1M4c LINE L1 3861 5549 -833 580 63 11 21 chr10 86274837 86274932 -59314356 - L1PB1 LINE L1 -1 6150 6057 1286 164 4 0 chr10 86274944 86275188 -59314100 - L1 LINE L1 -743 5403 5159 * 3039 209 26 54 chr10 86275186 86275726 -59313562 + L1MB4 LINE L1 4776 5329 -851 1793 139 0 65 chr10 86275726 86276036 -59313252 - AluSx SINE Alu -22 290 1 3039 209 26 54 chr10 86276036 86276104 -59313184 + L1MB4 LINE L1 5329 5397 -783 180 0 0 0 chr10 86276104 86276124 -59313164 + (GA)n Simple_repeat Simple_repeat 2 21 0 3039 209 26 54 chr10 86276124 86276754 -59312534 + L1MB4 LINE L1 5397 6129 -51 601 318 50 0 chr10 86276860 86277039 -59312249 - MER5A DNA MER1_type 0 189 2 524 321 30 34 chr10 86277239 86277476 -59311812 + MIR SINE MIR 13 248 -14 27 29 0 0 chr10 86277685 86277719 -59311569 + AT_rich Low_complexity Low_complexity 1 34 0 771 65 79 15 chr10 86277878 86279002 -59310286 + (TA)n Simple_repeat Simple_repeat 1 1195 0 935 185 120 0 chr10 86279007 86279207 -59310081 + MER57A LTR ERV1 153 376 -27 276 111 0 0 chr10 86479368 86479413 -59109875 + (A)n Simple_repeat Simple_repeat 1 45 0 220 294 70 7 chr10 86479592 86479735 -59109553 - L2 LINE L2 -1023 2291 2140 1956 122 62 0 chr10 86480251 86480539 -59108749 - AluSx SINE Alu -6 306 1 239 292 241 7 chr10 86480540 86480677 -59108611 + L2 LINE L2 3102 3270 -2 352 320 112 24 chr10 86480725 86480931 -59108357 - L2 LINE L2 -1279 2035 1812 886 193 0 0 chr10 86480983 86481176 -59108112 + FRAM SINE Alu 1 191 0 2150 93 20 27 chr10 86481299 86481599 -59107689 - AluSx SINE Alu -14 298 1 1940 133 24 7 chr10 86481853 86482146 -59107142 + AluSq SINE Alu 2 299 -14 1574 161 0 70 chr10 86482145 86482443 -59106845 - AluJb SINE Alu -35 277 1 * 2097 119 3 0 chr10 86482455 86482749 -59106539 - AluSx SINE Alu -17 295 1 2065 123 3 0 chr10 86482860 86483153 -59106135 + AluSx SINE Alu 1 294 -18 746 158 87 8 chr10 86483267 86483293 -59105995 + MER30 DNA MER1_type 94 117 -113 2364 83 0 17 chr10 86483293 86483595 -59105693 + AluSx SINE Alu 1 297 -15 746 158 87 8 chr10 86483595 86483695 -59105593 + MER30 DNA MER1_type 117 230 0 233 297 0 14 chr10 86484408 86484482 -59104806 + MIR SINE MIR 6 78 -184 227 222 37 0 chr10 86484487 86484541 -59104747 + L1MC5 LINE L1 7832 7887 -74 2151 54 0 4 chr10 86484692 86484950 -59104338 + AluY SINE Alu 39 295 -16 2527 58 0 13 chr10 86484955 86485267 -59104021 + AluY SINE Alu 1 308 -3 2197 125 0 3 chr10 86485721 86486033 -59103255 + AluY SINE Alu 1 311 0 327 302 71 8 chr10 86486042 86486168 -59103120 - MER94 DNA DNA 0 134 1 1755 173 3 37 chr10 86486650 86486973 -59102315 + AluJb SINE Alu 1 312 0 233 224 0 0 chr10 86487078 86487136 -59102152 + A-rich Low_complexity Low_complexity 1 58 0 235 216 0 0 chr10 86487178 86487229 -59102059 + L2 LINE L2 2405 2455 -859 183 408 0 0 chr10 86487368 86487466 -59101822 - MIR SINE MIR -157 105 8 22 0 0 0 chr10 86487692 86487714 -59101574 + AT_rich Low_complexity Low_complexity 1 22 0 1086 167 38 46 chr10 86487746 86487801 -59101487 - L1MA6 LINE L1 0 6300 6246 2284 112 0 0 chr10 86487801 86488096 -59101192 - AluSx SINE Alu -17 295 1 1086 167 38 46 chr10 86488096 86488280 -59101008 - L1MA6 LINE L1 -54 6246 6063 1471 136 53 4 chr10 86488280 86488508 -59100780 + AluSq SINE Alu 66 304 -9 1585 187 11 7 chr10 86488561 86488844 -59100444 - AluJb SINE Alu -28 284 1 1292 170 87 73 chr10 86488844 86489144 -59100144 - AluJb SINE Alu -7 305 2 360 276 5 0 chr10 86489147 86489265 -59100023 - L1MEc LINE L1 -4878 1235 1154 698 168 115 0 chr10 86489266 86489379 -59099909 - FLAM_C SINE Alu -10 133 8 2052 147 3 6 chr10 86489409 86489721 -59099567 - AluSx SINE Alu -1 311 1 786 228 23 49 chr10 86489724 86490023 -59099265 - L1MEc LINE L1 -4952 1275 942 1415 146 15 0 chr10 86490025 86490231 -59099057 - AluSg/x SINE Alu -22 288 80 1847 252 125 47 chr10 86490311 86491144 -59098144 - L1MEc LINE L1 -5453 943 46 640 230 88 28 chr10 86491159 86491521 -59097767 - L1MCc LINE L1 -4159 2809 2271 2301 86 20 7 chr10 86491531 86491834 -59097454 - AluSc SINE Alu 0 309 3 460 123 0 41 chr10 86491836 86491909 -59097379 - FLAM_A SINE Alu -11 131 62 810 231 90 67 chr10 86492017 86492449 -59096839 - L1MCc LINE L1 -4921 2201 1760 237 178 0 0 chr10 86492449 86492494 -59096794 + CT-rich Low_complexity Low_complexity 3 47 0 863 275 59 35 chr10 86492509 86492955 -59096333 - L1MCc LINE L1 -4887 1536 1129 6707 143 45 83 chr10 86493078 86494046 -59095242 + L1MC3 LINE L1 6401 7299 -486 1776 172 3 14 chr10 86494046 86494342 -59094946 + AluJo SINE Alu 2 294 -18 6707 143 45 83 chr10 86494342 86494812 -59094476 + L1MC3 LINE L1 7299 7785 0 555 291 47 64 chr10 86495275 86495680 -59093608 - L1MCc LINE L1 -6009 414 17 588 270 142 26 chr10 86495680 86495947 -59093341 + L2 LINE L2 2969 3266 -47 35 0 0 0 chr10 86496631 86496666 -59092622 + AT_rich Low_complexity Low_complexity 1 35 0 285 280 59 16 chr10 86496729 86496814 -59092474 + MIR SINE MIR 19 107 -101 1952 139 4 0 chr10 86497033 86497358 -59091930 - AluJb SINE Alu 0 328 3 4928 160 27 15 chr10 86497667 86498642 -59090646 + L1MB5 LINE L1 5185 6165 -9 1681 180 17 0 chr10 86498769 86499064 -59090224 - AluJb SINE Alu -12 300 1 1796 264 102 27 chr10 86499088 86499861 -59089427 + HAL1 LINE L1 143 973 -1534 22 0 0 0 chr10 86499879 86499901 -59089387 + AT_rich Low_complexity Low_complexity 1 22 0 1074 195 127 8 chr10 86499955 86500191 -59089097 + AluJo SINE Alu 23 286 -26 481 299 99 0 chr10 86500241 86500462 -59088826 + HAL1 LINE L1 1112 1354 -1153 2687 27 0 0 chr10 86500463 86500762 -59088526 + AluYa5 SINE Alu 1 299 -12 215 283 17 142 chr10 86501210 86501330 -59087958 + L2 LINE L2 3166 3270 -2 713 228 0 0 chr10 86501828 86501951 -59087337 + FLAM_C SINE Alu 3 125 -18 1282 58 0 0 chr10 86502101 86502257 -59087031 - MER107 DNA MER1_type -38 159 4 2478 81 0 0 chr10 86502439 86502747 -59086541 - AluY SINE Alu -3 308 1 869 97 53 0 chr10 86502750 86502864 -59086424 - AluSq/x SINE Alu -180 133 14 1044 181 106 0 chr10 86502969 86503168 -59086120 - AluSg/x SINE Alu -9 303 84 469 162 0 0 chr10 86503218 86503292 -59085996 - L1MB4 LINE L1 -66 6114 6041 738 215 34 0 chr10 86503292 86503441 -59085847 + MSTB LTR MaLR 1 154 -272 2062 132 3 0 chr10 86503936 86504225 -59085063 + AluJb SINE Alu 8 297 -15 1848 158 10 0 chr10 86504420 86504711 -59084577 - AluJb SINE Alu -18 294 1 2208 112 3 6 chr10 86505122 86505436 -59083852 + AluSq SINE Alu 1 313 0 1349 74 0 0 chr10 86505436 86505619 -59083669 + AluSq SINE Alu 124 306 0 871 211 12 12 chr10 86505747 86505908 -59083380 - AluJb SINE Alu -7 305 145 223 330 10 0 chr10 86506427 86506527 -59082761 + C-rich Low_complexity Low_complexity 2 102 0 2061 113 3 3 chr10 86507426 86507717 -59081571 + AluSx SINE Alu 1 291 -21 384 340 58 13 chr10 86508521 86508677 -59080611 - MIR SINE MIR -37 225 63 193 313 38 0 chr10 86508861 86508941 -59080347 + MIR SINE MIR 53 135 -127 2074 103 0 10 chr10 86509663 86509955 -59079333 + AluY SINE Alu 7 295 -16 4264 140 21 80 chr10 86509955 86510085 -59079203 + L1MB7 LINE L1 5324 5460 -724 1383 132 136 8 chr10 86510085 86510335 -59078953 + AluJb SINE Alu 1 282 -30 231 36 0 0 chr10 86510338 86510366 -59078922 + (TAA)n Simple_repeat Simple_repeat 2 29 0 4264 140 21 80 chr10 86510366 86510746 -59078542 + L1MB7 LINE L1 5462 5765 -419 2258 123 3 0 chr10 86510746 86511056 -59078232 + AluSp SINE Alu 1 311 -2 4264 140 21 80 chr10 86511056 86511438 -59077850 + L1MB7 LINE L1 5765 6168 -16 1903 152 10 0 chr10 86511449 86511745 -59077543 + AluSx SINE Alu 1 299 -13 21 0 0 0 chr10 86512009 86512030 -59077258 + AT_rich Low_complexity Low_complexity 1 21 0 277 86 0 0 chr10 86512030 86512065 -59077223 - U2 snRNA snRNA -153 35 1 2301 109 0 0 chr10 86512169 86512473 -59076815 + AluSx SINE Alu 7 310 -2 229 292 0 0 chr10 86512885 86512933 -59076355 - MIR SINE MIR -164 98 51 220 118 20 20 chr10 86513113 86513164 -59076124 + CT-rich Low_complexity Low_complexity 1 51 0 231 299 64 19 chr10 86513530 86513687 -59075601 - LTR41 LTR ERVL -609 164 1 234 0 0 0 chr10 86513817 86513843 -59075445 + (TC)n Simple_repeat Simple_repeat 1 26 0 * 342 0 0 0 chr10 86513842 86513880 -59075408 + (CA)n Simple_repeat Simple_repeat 1 38 0 1062 254 120 41 chr10 86513895 86513925 -59075363 - L1M4 LINE L1 -1537 4609 4583 2477 53 0 31 chr10 86513925 86514244 -59075044 - AluY SINE Alu 0 311 3 1062 254 120 41 chr10 86514244 86514771 -59074517 - L1M4 LINE L1 -1563 4583 4008 2211 112 3 0 chr10 86514980 86515275 -59074013 + AluSp SINE Alu 1 296 -17 454 149 35 0 chr10 86515292 86515379 -59073909 - L1MB8 LINE L1 0 6178 6089 3604 212 63 12 chr10 86515852 86516732 -59072556 + L1ME2 LINE L1 5222 6140 -24 1677 153 54 27 chr10 86516993 86517288 -59072000 - AluJo SINE Alu -7 305 3 1961 147 0 0 chr10 86518239 86518524 -59070764 + AluJb SINE Alu 11 295 -17 3403 150 32 69 chr10 86518739 86519451 -59069837 + L1MB8 LINE L1 5451 6136 -42 277 345 84 17 chr10 86519483 86519949 -59069339 + L1M4 LINE L1 4681 5177 -969 2236 136 0 0 chr10 86520149 86520459 -59068829 + AluSx SINE Alu 1 310 -2 1077 135 0 29 chr10 86520848 86521018 -59068270 - FRAM SINE Alu -12 164 1 1695 157 31 14 chr10 86521164 86521457 -59067831 + AluJb SINE Alu 1 298 -14 437 147 15 0 chr10 86521474 86521542 -59067746 + FLAM_A SINE Alu 39 107 -35 231 289 104 22 chr10 86521561 86521696 -59067592 + L1ME4a LINE L1 5936 6081 -40 1748 166 18 0 chr10 86521711 86522016 -59067272 + AluJo SINE Alu 1 310 0 2342 98 0 22 chr10 86522051 86522366 -59066922 - AluSx SINE Alu -4 308 1 333 218 27 55 chr10 86523017 86523127 -59066161 + LTR33A LTR ERVL 415 521 -2 811 112 15 0 chr10 86523764 86523898 -59065390 + (GAAA)n Simple_repeat Simple_repeat 1 136 0 571 169 89 32 chr10 86523935 86524059 -59065229 + MLT1K LTR MaLR 456 586 -2 220 327 191 24 chr10 86524083 86524251 -59065037 + L2 LINE L2 3073 3268 -4 1875 186 61 3 chr10 86524631 86524976 -59064312 - MLT1A1 LTR MaLR 0 365 1 196 286 36 0 chr10 86526263 86526319 -59062969 + L2 LINE L2 3234 3291 -22 2096 133 0 0 chr10 86526929 86527223 -59062065 + AluSx SINE Alu 1 294 -18 2176 122 3 0 chr10 86527987 86528283 -59061005 + AluSp SINE Alu 1 297 -16 841 252 101 49 chr10 86528385 86528790 -59060498 + L1MCc LINE L1 24 449 -5974 1705 221 106 63 chr10 86528984 86529616 -59059672 + L1MCc LINE L1 740 1398 -5025 29 78 0 0 chr10 86530442 86530506 -59058782 + AT_rich Low_complexity Low_complexity 1 64 0 301 292 26 0 chr10 86530583 86530696 -59058592 + L1MC4a LINE L1 5749 5864 -1944 300 323 81 8 chr10 86531135 86531259 -59058029 - L2 LINE L2 -2 3270 3138 874 144 0 7 chr10 86531261 86531408 -59057880 + FLAM_C SINE Alu 7 139 -4 1186 204 11 15 chr10 86531413 86531678 -59057610 + L1MB8 LINE L1 4856 5119 -1027 3927 143 17 14 chr10 86531678 86532368 -59056920 + L1MB8 LINE L1 5475 6166 -12 425 297 198 0 chr10 86532445 86532647 -59056641 - L2 LINE L2 -252 3061 2820 980 309 170 35 chr10 86532970 86533828 -59055460 - L2 LINE L2 -727 2587 1614 240 357 71 6 chr10 86534067 86534249 -59055039 + L2 LINE L2 2495 2688 -626 1373 176 149 10 chr10 86534250 86534546 -59054742 + MLT1F1 LTR MaLR 100 436 -131 2354 87 7 0 chr10 86535190 86535488 -59053800 + AluSp SINE Alu 1 300 -13 26 0 0 0 chr10 86535491 86535517 -59053771 + AT_rich Low_complexity Low_complexity 1 26 0 1869 153 0 7 chr10 86535855 86536156 -59053132 - AluJo SINE Alu -13 299 1 341 304 0 26 chr10 86537429 86537544 -59051744 - L3 LINE CR1 -263 1314 1203 2461 70 0 0 chr10 86537562 86537863 -59051425 + AluY SINE Alu 1 301 -10 1900 145 7 7 chr10 86538538 86538834 -59050454 - AluJb SINE Alu -16 296 1 633 152 182 0 chr10 86538857 86538989 -59050299 - L1PA16 LINE L1 -9 6157 6002 2202 123 0 0 chr10 86539001 86539303 -59049985 - AluSx SINE Alu -10 302 1 21 0 0 0 chr10 86539938 86539959 -59049329 + AT_rich Low_complexity Low_complexity 1 21 0 350 211 0 26 chr10 86540632 86540708 -59048580 + MER21B LTR ERV1 1 74 -789 1537 176 0 86 chr10 86540807 86541131 -59048157 + AluJb SINE Alu 1 296 -16 2260 96 0 0 chr10 86541564 86541856 -59047432 - AluSg SINE Alu -18 292 1 21 0 0 0 chr10 86541863 86541884 -59047404 + AT_rich Low_complexity Low_complexity 1 21 0 2416 50 3 7 chr10 86542127 86542424 -59046864 - AluY SINE Alu -15 296 1 489 316 85 26 chr10 86542991 86543298 -59045990 - L1ME4a LINE L1 -296 5825 5501 325 195 6 24 chr10 86543364 86543486 -59045802 - L1ME4a LINE L1 -759 5392 5279 324 325 83 18 chr10 86543598 86543767 -59045521 - L1ME4a LINE L1 -1077 5069 4890 31 0 0 0 chr10 86543786 86543817 -59045471 + AT_rich Low_complexity Low_complexity 1 31 0 1963 152 3 0 chr10 86543930 86544227 -59045061 + AluSq SINE Alu 5 302 -11 302 229 0 0 chr10 86544598 86544674 -59044614 - L1ME3 LINE L1 0 6170 6093 324 179 105 42 chr10 86544851 86544946 -59044342 + L1MC5 LINE L1 7806 7906 -55 300 314 86 0 chr10 86545086 86545191 -59044097 + MIR SINE MIR 32 145 -117 22 56 0 0 chr10 86545326 86545362 -59043926 + AT_rich Low_complexity Low_complexity 1 36 0 4329 123 34 3 chr10 86545433 86545740 -59043548 - L1PA16 LINE L1 -3 6163 5867 219 36 0 0 chr10 86545740 86545768 -59043520 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 1744 176 0 7 chr10 86545768 86546047 -59043241 - AluJb SINE Alu -30 282 6 4329 123 34 3 chr10 86546047 86546421 -59042867 - L1PA16 LINE L1 -298 5868 5460 1890 165 7 0 chr10 86546422 86546713 -59042575 + AluJo SINE Alu 1 293 -19 201 162 0 0 chr10 86546906 86546943 -59042345 + T-rich Low_complexity Low_complexity 1 37 0 215 231 11 33 chr10 86547946 86548037 -59041251 + (CGG)n Simple_repeat Simple_repeat 3 91 0 355 333 38 13 chr10 86548874 86549033 -59040255 - L1ME4a LINE L1 -1368 4778 4616 528 145 0 0 chr10 86549039 86549122 -59040166 - AluJ/FLAM SINE Alu -225 87 5 1362 274 109 20 chr10 86549136 86549794 -59039494 - L1ME4a LINE L1 -1540 4606 3890 7611 239 87 39 chr10 86549813 86550513 -59038775 - L1MC4a LINE L1 -4 7804 7139 2109 144 0 0 chr10 86550513 86550825 -59038463 - AluJb SINE Alu 0 312 1 7611 239 87 39 chr10 86550825 86551177 -59038111 - L1MC4a LINE L1 -669 7139 6805 1812 172 0 0 chr10 86551177 86551467 -59037821 + AluJb SINE Alu 1 290 -22 2366 109 0 0 chr10 86551472 86551783 -59037505 + AluSx SINE Alu 1 311 -1 7611 239 87 39 chr10 86551783 86553061 -59036227 - L1MC4a LINE L1 -1006 6802 5587 1690 171 0 0 chr10 86553061 86553318 -59035970 - AluJb SINE Alu -53 259 3 7611 239 87 39 chr10 86553318 86554279 -59035009 - L1MC4a LINE L1 -2221 5587 4673 1332 189 40 57 chr10 86554279 86554576 -59034712 - AluJo SINE Alu -20 292 1 7611 239 87 39 chr10 86554576 86554749 -59034539 - L1MC4a LINE L1 -3135 4673 4510 1986 138 13 13 chr10 86554749 86555061 -59034227 - AluSx SINE Alu 0 312 1 7611 239 87 39 chr10 86555061 86555207 -59034081 - L1MC4a LINE L1 -3298 4510 4018 1540 183 50 11 chr10 86555289 86555568 -59033720 - AluJb SINE Alu -22 290 1 572 204 33 4 chr10 86555614 86555785 -59033503 + L1MD2 LINE L1 6194 7807 -2 772 282 165 8 chr10 86555794 86556181 -59033107 + L2 LINE L2 2205 2652 -662 533 221 96 82 chr10 86556221 86556429 -59032859 + L2 LINE L2 3102 3312 -1 723 250 77 14 chr10 86556769 86556989 -59032299 - MIR SINE MIR -28 234 1 202 150 25 0 chr10 86556994 86557034 -59032254 + T-rich Low_complexity Low_complexity 3 43 0 190 319 85 11 chr10 86557078 86557172 -59032116 - MIR SINE MIR -122 140 40 196 412 0 0 chr10 86557823 86557908 -59031380 - MIR SINE MIR -133 129 45 322 291 206 14 chr10 86558490 86558713 -59030575 + L2 LINE L2 2225 2490 -824 2408 80 0 0 chr10 86559396 86559695 -59029593 + AluSg SINE Alu 1 299 -11 280 286 0 48 chr10 86559906 86560011 -59029277 + L1ME LINE L1 5724 5823 -298 2412 57 0 3 chr10 86560524 86560823 -59028465 + AluY SINE Alu 1 298 -13 2227 101 10 0 chr10 86561080 86561376 -59027912 + AluSx SINE Alu 1 299 -13 1174 171 46 14 chr10 86561389 86561605 -59027683 + 7SLRNA srpRNA srpRNA 2 224 -96 751 164 0 29 chr10 86561605 86561745 -59027543 + FLAM_C SINE Alu 6 141 -2 540 139 69 20 chr10 86561755 86561856 -59027432 + 7SLRNA srpRNA srpRNA 213 318 -2 833 212 108 9 chr10 86561896 86562108 -59027180 + MIR SINE MIR 19 251 -11 22 35 0 0 chr10 86562254 86562283 -59027005 + AT_rich Low_complexity Low_complexity 1 29 0 1494 169 65 0 chr10 86562362 86562622 -59026666 - AluJo SINE Alu -35 277 1 1997 112 7 3 chr10 86564642 86564927 -59024361 + AluSc SINE Alu 1 286 -23 751 167 0 47 chr10 86565139 86565289 -59023999 + AluJb SINE Alu 161 303 -9 2070 123 3 0 chr10 86565304 86565597 -59023691 + AluSg SINE Alu 1 294 -16 308 306 46 0 chr10 86565995 86566103 -59023185 + MIR SINE MIR 149 261 -1 517 400 19 13 chr10 86566259 86566574 -59022714 - MLT1K LTR MaLR -235 353 37 405 268 56 28 chr10 86566932 86567074 -59022214 + LTR50 LTR ERVL 463 608 -187 293 321 107 0 chr10 86567479 86567610 -59021678 + MIR SINE MIR 56 200 -62 31 88 0 0 chr10 86567691 86567771 -59021517 + AT_rich Low_complexity Low_complexity 1 80 0 412 297 58 13 chr10 86567936 86568091 -59021197 - MER63 DNA MER1_type -273 789 2 701 281 97 26 chr10 86568365 86568675 -59020613 - MER58B DNA MER1_type 0 341 10 289 120 0 60 chr10 86568776 86568826 -59020462 - MLT2B1 LTR ERVL 0 554 508 396 203 16 31 chr10 86568830 86568958 -59020330 + (CAGAGA)n Simple_repeat Simple_repeat 4 129 0 1911 209 139 5 chr10 86568958 86569374 -59019914 - MLT2B1 LTR ERVL -48 472 1 250 172 47 0 chr10 86569432 86569496 -59019792 + CT-rich Low_complexity Low_complexity 2 68 0 547 341 123 63 chr10 86570007 86570463 -59018825 + L3 LINE CR1 447 874 -703 883 269 23 0 chr10 86570463 86570679 -59018609 + MER58A DNA MER1_type 1 221 -3 547 341 123 63 chr10 86570679 86571232 -59018056 + L3 LINE CR1 874 1516 -61 21 0 0 0 chr10 86571398 86571419 -59017869 + AT_rich Low_complexity Low_complexity 1 21 0 246 32 0 0 chr10 86571442 86571473 -59017815 + (ATTG)n Simple_repeat Simple_repeat 2 32 0 2125 100 0 0 chr10 86571476 86571755 -59017533 - AluSx SINE Alu -33 279 1 2398 73 10 3 chr10 86572475 86572776 -59016512 - AluSp SINE Alu -10 303 1 384 272 101 1 chr10 86573203 86573339 -59015949 - MIR SINE MIR -62 146 42 558 308 122 5 chr10 86573787 86574008 -59015280 - MIR SINE MIR -15 247 1 278 299 10 21 chr10 86574667 86574764 -59014524 - MIR SINE MIR -71 191 96 1627 173 0 45 chr10 86574910 86575223 -59014065 + AluJb SINE Alu 1 299 -13 2356 53 0 13 chr10 86575386 86575685 -59013603 + AluY SINE Alu 2 296 -15 1373 61 0 11 chr10 86575698 86575879 -59013409 + AluY SINE Alu 131 309 -2 417 198 33 33 chr10 86576730 86576821 -59012467 - MIR SINE MIR -125 137 47 235 234 0 0 chr10 86578110 86578157 -59011131 + (TGAA)n Simple_repeat Simple_repeat 2 48 0 647 181 96 18 chr10 86578341 86578507 -59010781 + L1MA10 LINE L1 6155 6333 -1 260 341 0 0 chr10 86581841 86581926 -59007362 + (TG)n Simple_repeat Simple_repeat 2 86 0 596 202 48 30 chr10 86582136 86582304 -59006984 - L1 LINE L1 -902 5244 5074 200 300 31 27 chr10 86582612 86582721 -59006567 - MIR SINE MIR -93 115 57 26 30 0 0 chr10 86583514 86583547 -59005741 + AT_rich Low_complexity Low_complexity 1 33 0 556 264 66 0 chr10 86583567 86583734 -59005554 - MER5B DNA MER1_type 0 178 1 28 0 0 0 chr10 86585817 86585845 -59003443 + AT_rich Low_complexity Low_complexity 1 28 0 226 295 16 47 chr10 86586040 86586169 -59003119 - L1ME LINE L1 -369 5752 5628 1754 209 16 14 chr10 86589137 86589505 -58999783 + L1MA8 LINE L1 5809 6177 -114 2641 39 0 0 chr10 86589669 86589977 -58999311 + AluY SINE Alu 1 308 -3 593 111 56 0 chr10 86590343 86590451 -58998837 + L1MA8 LINE L1 6178 6291 0 2327 50 6 47 chr10 86590931 86591250 -58998038 - AluY SINE Alu -5 306 1 262 286 57 0 chr10 86592992 86593062 -58996226 - MER91C DNA MER1_type -42 98 25 201 250 97 0 chr10 86593845 86593917 -58995371 + MIR SINE MIR 176 254 -8 26 30 0 0 chr10 86594774 86594807 -58994481 + AT_rich Low_complexity Low_complexity 1 33 0 24 0 0 0 chr10 86596613 86596637 -58992651 + AT_rich Low_complexity Low_complexity 1 24 0 2217 88 57 0 chr10 86598082 86598378 -58990910 + AluSp SINE Alu 1 313 0 198 271 34 0 chr10 86598644 86598703 -58990585 + MIR SINE MIR 202 262 0 184 387 19 0 chr10 86601172 86601278 -58988010 - MIR SINE MIR -67 141 34 24 0 0 0 chr10 86601493 86601517 -58987771 + AT_rich Low_complexity Low_complexity 1 24 0 1129 99 6 12 chr10 86603936 86604108 -58985180 - L1M1 LINE L1 -4716 2849 2679 582 208 138 0 chr10 86604232 86604391 -58984897 + MER53 DNA DNA 7 187 -2 324 373 10 23 chr10 86604426 86604680 -58984608 - LTR16A LTR ERVL -202 248 1 2217 88 57 0 chr10 86605158 86605454 -58983834 + AluSp SINE Alu 1 313 0 188 271 34 0 chr10 86605715 86605774 -58983514 + MIR SINE MIR 202 262 0 1914 150 37 6 chr10 86606123 86606450 -58982838 + MER1B DNA MER1_type 1 337 0 2294 158 35 24 chr10 86607130 86607553 -58981735 - MSTC LTR MaLR 0 428 1 708 237 132 5 chr10 86608749 86608939 -58980349 + MER20 DNA MER1_type 6 219 0 702 269 72 18 chr10 86609002 86609225 -58980063 - MIR SINE MIR 0 262 28 360 0 0 0 chr10 86609370 86609410 -58979878 + (TTTA)n Simple_repeat Simple_repeat 4 43 0 25 0 0 0 chr10 86609497 86609522 -58979766 + AT_rich Low_complexity Low_complexity 1 25 0 42 77 0 0 chr10 86609627 86609718 -58979570 + AT_rich Low_complexity Low_complexity 1 91 0 25 20 0 59 chr10 86610288 86610339 -58978949 + AT_rich Low_complexity Low_complexity 1 48 0 641 348 100 18 chr10 86610364 86610853 -58978435 + L2 LINE L2 2503 3039 -274 252 143 0 0 chr10 86611907 86611949 -58977339 + (TATATG)n Simple_repeat Simple_repeat 6 47 0 22 0 0 0 chr10 86612444 86612466 -58976822 + AT_rich Low_complexity Low_complexity 1 22 0 39 60 0 0 chr10 86612785 86612852 -58976436 + AT_rich Low_complexity Low_complexity 1 67 0 296 285 45 19 chr10 86613048 86613152 -58976136 + FRAM/FAM SINE Alu 1 83 -83 2929 106 11 7 chr10 86613236 86613671 -58975617 - L1PA13 LINE L1 -6 6157 5721 220 256 77 0 chr10 86613686 86613764 -58975524 - L2 LINE L2 -342 2972 2889 338 254 130 86 chr10 86614160 86614475 -58974813 - L1M4 LINE L1 -2693 3453 3125 378 274 57 45 chr10 86614499 86614744 -58974544 - L1M4 LINE L1 -3139 3007 2760 229 62 12 86 chr10 86615749 86615830 -58973458 + (TA)n Simple_repeat Simple_repeat 2 76 0 2105 121 3 7 chr10 86616291 86616588 -58972700 + AluSx SINE Alu 1 296 -16 26 30 0 0 chr10 86616616 86616649 -58972639 + AT_rich Low_complexity Low_complexity 1 33 0 1591 103 3 103 chr10 86616868 86617170 -58972118 - AluSc SINE Alu -37 272 1 352 293 199 22 chr10 86617623 86617804 -58971484 - MIR SINE MIR -5 257 45 273 283 0 0 chr10 86617922 86617982 -58971306 + AluSp SINE Alu 132 191 -112 * 384 125 0 47 chr10 86617963 86618027 -58971261 + FLAM SINE Alu 70 130 -3 233 246 49 0 chr10 86618388 86618449 -58970839 + MER103 DNA DNA 2 65 -101 261 201 60 52 chr10 86618467 86618627 -58970661 + MIR SINE MIR 31 260 -2 308 189 63 53 chr10 86618638 86618733 -58970555 + MER103 DNA DNA 70 165 -1 2066 137 0 13 chr10 86618836 86619142 -58970146 - AluJb SINE Alu -10 302 1 2272 102 3 0 chr10 86619223 86619518 -58969770 - AluSp SINE Alu -17 296 1 690 319 124 40 chr10 86619651 86620656 -58968632 + L2 LINE L2 926 2015 -1299 277 253 162 10 chr10 86620649 86620748 -58968540 - L2 LINE L2 -5 3267 3154 * 387 261 87 53 chr10 86620932 86621196 -58968092 + L2 LINE L2 1716 1988 -1326 194 243 54 14 chr10 86621238 86621312 -58967976 + L2 LINE L2 2144 2220 -1094 2204 95 3 3 chr10 86621312 86621606 -58967682 + AluSq SINE Alu 2 295 -18 1040 156 13 0 chr10 86621608 86621762 -58967526 + AluJb SINE Alu 134 289 -23 29 0 0 0 chr10 86624475 86624504 -58964784 + AT_rich Low_complexity Low_complexity 1 29 0 242 319 81 31 chr10 86625421 86625581 -58963707 - MIR SINE MIR -4 258 91 1279 215 66 46 chr10 86625636 86625985 -58963303 - MLT1A1 LTR MaLR 0 365 10 180 111 0 0 chr10 86626119 86626146 -58963142 + (TG)n Simple_repeat Simple_repeat 2 28 0 204 274 0 0 chr10 86626673 86626724 -58962564 + (TG)n Simple_repeat Simple_repeat 1 51 0 6259 75 25 15 chr10 86627152 86627346 -58961942 + L1PA7 LINE L1 5132 5323 -831 2535 37 7 0 chr10 86627346 86627644 -58961644 + AluY SINE Alu 1 300 -11 6259 75 25 15 chr10 86627644 86628463 -58960825 + L1PA7 LINE L1 5323 6154 0 1551 150 120 0 chr10 86628519 86628793 -58960495 + AluJb SINE Alu 1 307 -5 27 0 0 0 chr10 86628796 86628823 -58960465 + AT_rich Low_complexity Low_complexity 1 27 0 372 22 0 0 chr10 86628916 86628961 -58960327 + (CA)n Simple_repeat Simple_repeat 2 46 0 220 247 22 22 chr10 86629022 86629111 -58960177 + (TCTA)n Simple_repeat Simple_repeat 4 92 0 322 280 104 16 chr10 86629288 86629413 -58959875 + MIR SINE MIR 20 155 -107 405 339 91 21 chr10 86629737 86629979 -58959309 - L2 LINE L2 -2744 570 312 191 344 104 27 chr10 86629973 86630156 -58959132 - MIR SINE MIR -17 245 49 * 34 0 0 0 chr10 86630202 86630236 -58959052 + AT_rich Low_complexity Low_complexity 1 34 0 242 354 83 0 chr10 86630295 86630391 -58958897 + MIR SINE MIR 47 150 -112 27 0 0 0 chr10 86630545 86630572 -58958716 + AT_rich Low_complexity Low_complexity 1 27 0 308 338 48 0 chr10 86630611 86630756 -58958532 - L1ME3 LINE L1 -17 6145 5994 1140 273 45 12 chr10 86630772 86631197 -58958091 - L1ME3 LINE L1 -245 5919 5481 683 176 0 17 chr10 86631202 86631321 -58957967 - FRAM SINE Alu -19 157 41 295 253 21 11 chr10 86631322 86631417 -58957871 - L1ME3 LINE L1 -669 5493 5398 * 1504 212 22 43 chr10 86631388 86631827 -58957461 - L1MC/D LINE L1 -577 6059 5630 337 257 48 38 chr10 86631811 86631916 -58957372 - L1MC/D LINE L1 -5549 991 886 * 324 300 122 53 chr10 86632515 86632593 -58956695 - L1M2 LINE L1 -5910 939 868 26 30 0 0 chr10 86632593 86632626 -58956662 + GC_rich Low_complexity Low_complexity 1 33 0 324 300 122 53 chr10 86632626 86632762 -58956526 - L1M2 LINE L1 -5981 868 676 320 283 33 78 chr10 86632727 86632907 -58956381 + L1M2 LINE L1 806 977 -5872 * 214 172 11 81 chr10 86633120 86633207 -58956081 + (CGGGG)n Simple_repeat Simple_repeat 3 83 0 194 62 31 0 chr10 86633800 86633832 -58955456 + (CCTCG)n Simple_repeat Simple_repeat 1 33 0 22 0 0 0 chr10 86634377 86634399 -58954889 + AT_rich Low_complexity Low_complexity 1 22 0 2219 86 33 3 chr10 86634598 86634900 -58954388 - AluSp SINE Alu -2 311 1 389 268 53 79 chr10 86635485 86635713 -58953575 + MIR SINE MIR 41 262 0 280 339 18 42 chr10 86636102 86636270 -58953018 - MIR SINE MIR -8 254 91 22 35 0 0 chr10 86636830 86636859 -58952429 + AT_rich Low_complexity Low_complexity 1 29 0 284 380 37 12 chr10 86639534 86639697 -58949591 - L2 LINE L2 0 3272 3106 1214 125 0 48 chr10 86639700 86639908 -58949380 + MER39B LTR ERV1 4 201 -452 408 270 27 135 chr10 86639935 86640343 -58948945 + MER63C DNA MER1_type 148 511 -419 2619 246 104 21 chr10 86641177 86642572 -58946716 - L1M4 LINE L1 -3442 2940 1434 1375 111 48 5 chr10 86642600 86642808 -58946480 + AluSp SINE Alu 97 313 0 215 238 0 0 chr10 86643014 86643056 -58946232 + A-rich Low_complexity Low_complexity 3 44 0 337 257 48 38 chr10 86643270 86643375 -58945913 + L1MD1 LINE L1 886 991 -5549 * 4177 221 15 18 chr10 86643359 86644369 -58944919 + L1MD1 LINE L1 5630 6636 0 2206 249 61 56 chr10 86644349 86644594 -58944694 + L1MB1 LINE L1 3012 3254 -2892 * 2245 119 10 0 chr10 86644594 86644904 -58944384 + AluSq SINE Alu 1 313 0 2206 249 61 56 chr10 86644904 86645790 -58943498 + L1MB1 LINE L1 3254 4149 -1997 541 238 152 17 chr10 86645791 86645823 -58943465 + L1MB1 LINE L1 4335 4361 -1785 1279 197 3 53 chr10 86645823 86646127 -58943161 + AluJo SINE Alu 1 289 -23 541 238 152 17 chr10 86646127 86646330 -58942958 + L1MB1 LINE L1 4361 4600 -1546 24 53 0 0 chr10 86646382 86646420 -58942868 + AT_rich Low_complexity Low_complexity 1 38 0 268 254 16 0 chr10 86648145 86648208 -58941080 + MER5B DNA MER1_type 1 64 -114 875 200 0 0 chr10 86648209 86648354 -58940934 + FRAM SINE Alu 2 146 -30 234 207 118 178 chr10 86648363 86648498 -58940790 + MER5B DNA MER1_type 50 176 -2 366 274 61 30 chr10 86648645 86648809 -58940479 + L1MB1 LINE L1 4966 5134 -1012 4472 172 41 5 chr10 86648866 86649737 -58939551 + L1MB1 LINE L1 5266 6168 0 522 291 22 3 chr10 86649734 86650028 -58939260 + L1ME3 LINE L1 5191 5493 -669 * 744 143 0 17 chr10 86650029 86650148 -58939140 + FRAM SINE Alu 41 157 -19 1058 278 45 12 chr10 86650154 86650578 -58938710 + L1ME3 LINE L1 5482 5919 -245 332 338 35 0 chr10 86650599 86650744 -58938544 + L1ME3 LINE L1 5996 6145 -17 26 30 0 0 chr10 86650783 86650816 -58938472 + AT_rich Low_complexity Low_complexity 1 33 0 242 354 83 0 chr10 86650970 86651066 -58938222 - MIR SINE MIR -112 150 47 38 0 0 0 chr10 86651125 86651163 -58938125 + AT_rich Low_complexity Low_complexity 1 38 0 185 322 109 33 chr10 86651209 86651392 -58937896 + MIR SINE MIR 49 245 -17 * 838 323 168 11 chr10 86651386 86651940 -58937348 + L2 LINE L2 312 952 -2362 989 285 115 64 chr10 86651984 86652386 -58936902 + L2 LINE L2 2476 2856 -457 1688 212 11 30 chr10 86652386 86652758 -58936530 - MLT1A1 LTR MaLR 0 365 1 989 285 115 64 chr10 86652758 86652843 -58936445 + L2 LINE L2 2856 2935 -378 2375 127 5 16 chr10 86652843 86653222 -58936066 - THE1C LTR MaLR 0 375 1 989 285 115 64 chr10 86653222 86653526 -58935762 + L2 LINE L2 2935 3313 0 1875 200 53 36 chr10 86654878 86655430 -58933858 + L1MB4 LINE L1 5710 6178 -2 346 251 53 18 chr10 86655430 86655601 -58933687 + (TA)n Simple_repeat Simple_repeat 2 178 0 364 169 0 14 chr10 86655636 86655707 -58933581 + L1MC1 LINE L1 6254 6323 -10 2290 59 0 39 chr10 86655735 86656042 -58933246 - AluY SINE Alu -16 295 1 265 313 21 42 chr10 86656103 86656247 -58933041 - MLT1L LTR MaLR -24 591 451 1448 213 57 65 chr10 86656935 86657306 -58931982 - MLT1A2 LTR MaLR -6 368 1 920 252 123 27 chr10 86657540 86657913 -58931375 - MLT1C LTR MaLR -5 462 54 27 49 0 0 chr10 86658279 86658320 -58930968 + AT_rich Low_complexity Low_complexity 1 41 0 29 47 0 0 chr10 86660142 86660185 -58929103 + AT_rich Low_complexity Low_complexity 1 43 0 25 0 0 0 chr10 86660390 86660415 -58928873 + AT_rich Low_complexity Low_complexity 1 25 0 648 271 17 17 chr10 86660482 86660663 -58928625 + MIR SINE MIR 58 238 -24 27 49 0 0 chr10 86660665 86660706 -58928582 + AT_rich Low_complexity Low_complexity 1 41 0 262 331 71 80 chr10 86661824 86662274 -58927014 - L2 LINE L2 0 3272 2827 195 42 0 0 chr10 86662282 86662306 -58926982 + (T)n Simple_repeat Simple_repeat 1 24 0 1049 224 67 58 chr10 86662405 86662718 -58926570 + L1MCa LINE L1 10 325 -6101 914 282 21 6 chr10 86662722 86663062 -58926226 + L1MCa LINE L1 2566 2910 -3516 380 256 26 51 chr10 86663122 86663239 -58926049 + MER5B DNA MER1_type 59 172 -6 28 48 0 0 chr10 86663375 86663417 -58925871 + AT_rich Low_complexity Low_complexity 1 42 0 448 58 16 277 chr10 86663438 86663626 -58925662 + L1MA8 LINE L1 6010 6148 -143 26 0 0 0 chr10 86664389 86664415 -58924873 + AT_rich Low_complexity Low_complexity 1 26 0 2525 46 0 3 chr10 86664663 86664966 -58924322 - AluY SINE Alu -9 302 1 21 36 0 0 chr10 86666399 86666427 -58922861 + AT_rich Low_complexity Low_complexity 1 28 0 678 278 55 29 chr10 86666926 86667271 -58922017 - L1ME1 LINE L1 -2 6164 5811 * 3841 200 62 37 chr10 86667270 86668574 -58920714 - L1MC2 LINE L1 -11 6333 4901 360 0 0 0 chr10 86668582 86668622 -58920666 + (TG)n Simple_repeat Simple_repeat 1 40 0 1478 246 77 48 chr10 86668636 86669420 -58919868 - L1ME1 LINE L1 -378 5788 4985 251 338 93 34 chr10 86669529 86669733 -58919555 + MLT1J LTR MaLR 24 239 -272 1679 71 9 0 chr10 86669924 86670150 -58919138 - L1PA6 LINE L1 -7 6147 5920 22 0 0 0 chr10 86670690 86670712 -58918576 + AT_rich Low_complexity Low_complexity 1 22 0 279 188 0 0 chr10 86671131 86671195 -58918093 + L1MA1 LINE L1 6239 6302 0 859 139 0 0 chr10 86672039 86672176 -58917112 - AluSg/x SINE Alu -8 304 168 2577 114 0 10 chr10 86672267 86672654 -58916634 - L1PA13 LINE L1 -4 6159 5777 328 240 0 62 chr10 86672853 86672949 -58916339 - L1MC4 LINE L1 -1339 6703 6614 228 213 0 0 chr10 86672952 86673013 -58916275 + (TA)n Simple_repeat Simple_repeat 2 62 0 307 294 63 0 chr10 86673037 86673194 -58916094 + L1MC4 LINE L1 6586 6705 -1337 184 30 61 0 chr10 86673208 86673241 -58916047 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 1254 267 73 54 chr10 86673290 86673719 -58915569 + L1M4 LINE L1 2303 2722 -3424 631 64 11 11 chr10 86673719 86673813 -58915475 + (TAGA)n Simple_repeat Simple_repeat 1 94 0 1254 267 73 54 chr10 86673813 86674566 -58914722 + L1M4 LINE L1 2722 3508 -2638 665 263 96 47 chr10 86674857 86675451 -58913837 + L1M4 LINE L1 4617 5239 -907 1219 183 84 22 chr10 86675523 86675797 -58913491 + AluJb SINE Alu 1 291 -11 1959 101 14 28 chr10 86678719 86679041 -58910247 + AluSq SINE Alu 1 318 0 479 308 197 3 chr10 86682670 86682959 -58906329 + MLT1I LTR MaLR 65 409 0 578 328 80 13 chr10 86683604 86683918 -58905370 + LTR16A LTR ERVL 21 355 -95 2365 90 0 0 chr10 86684016 86684327 -58904961 - AluY SINE Alu 0 311 1 197 305 12 37 chr10 86684457 86684539 -58904749 - L2 LINE L2 -1004 2310 2231 284 315 56 0 chr10 86684672 86684780 -58904508 - MLT1H LTR MaLR -26 523 410 852 254 44 44 chr10 86685069 86685317 -58903971 - MIR SINE MIR -5 257 10 2233 99 3 3 chr10 86686940 86687252 -58902036 + AluSx SINE Alu 1 312 0 746 219 49 34 chr10 86688986 86689191 -58900097 + MER63A DNA MER1_type 1 208 -2 1296 209 34 4 chr10 86689518 86689786 -58899502 + LTR43 LTR ERV1 195 470 -132 1302 223 96 47 chr10 86690061 86690487 -58898801 + MER101 LTR ERV1 9 455 -19 2177 90 0 0 chr10 86692288 86692567 -58896721 - AluSx SINE Alu -33 279 1 658 244 57 122 chr10 86692813 86693272 -58896016 + MER63C DNA MER1_type 83 511 -419 251 302 103 0 chr10 86700086 86700212 -58889076 + MIR SINE MIR 93 231 -31 855 249 90 34 chr10 86700930 86701284 -58888004 - MLT1A2 LTR MaLR 0 374 1 259 170 22 39 chr10 86703723 86703905 -58885383 + (TG)n Simple_repeat Simple_repeat 2 180 0 283 319 0 0 chr10 86705428 86705522 -58883766 + G-rich Low_complexity Low_complexity 1 94 0 1464 196 38 46 chr10 86707511 86707883 -58881405 + MLT1A2 LTR MaLR 6 374 0 2539 32 0 10 chr10 86708294 86708602 -58880686 - AluY SINE Alu -6 305 1 822 183 0 43 chr10 86709091 86709255 -58880033 - AluJb SINE Alu -26 286 130 321 348 12 37 chr10 86709855 86710019 -58879269 - MIR SINE MIR -54 208 49 806 249 92 29 chr10 86710149 86710422 -58878866 + MLT1L LTR MaLR 2 291 -324 447 306 56 60 chr10 86710422 86710674 -58878614 - L2 LINE L2 -2345 969 719 665 276 100 17 chr10 86710970 86711209 -58878079 + MLT1L LTR MaLR 324 582 -33 2288 154 48 10 chr10 86711725 86712141 -58877147 - MSTB1 LTR MaLR 0 432 1 8039 211 47 43 chr10 86712545 86714666 -58874622 + L1MB4 LINE L1 3118 5229 -951 308 119 0 0 chr10 86714666 86714708 -58874580 + MSTA LTR MaLR 387 428 0 8039 211 47 43 chr10 86714708 86715065 -58874223 + L1MB4 LINE L1 5229 5646 -534 2228 153 51 12 chr10 86715065 86715476 -58873812 + MSTA LTR MaLR 2 428 0 8039 211 47 43 chr10 86715476 86715600 -58873688 + L1MB4 LINE L1 5646 5768 -412 890 130 0 0 chr10 86715600 86715731 -58873557 + AluSq/x SINE Alu 1 131 -181 2080 143 30 33 chr10 86715737 86716130 -58873158 + L1MB4 LINE L1 5757 6148 -32 1630 156 16 0 chr10 86716135 86716391 -58872897 - MSTB1 LTR MaLR 0 432 173 597 167 0 0 chr10 86716391 86716481 -58872807 + AluJo SINE Alu 2 91 -221 1036 140 12 0 chr10 86716502 86716666 -58872622 - MSTB1 LTR MaLR -244 188 23 1009 186 23 9 chr10 86716673 86716888 -58872400 + AluJo SINE Alu 89 306 -6 1811 185 147 25 chr10 86717247 86717630 -58871658 + MLT1D LTR MaLR 1 448 -57 1697 175 3 7 chr10 86717630 86717939 -58871349 - AluJb SINE Alu -4 308 1 1811 185 147 25 chr10 86717939 86718003 -58871285 + MLT1D LTR MaLR 448 503 -2 2987 159 50 10 chr10 86718080 86718595 -58870693 + Tigger3b DNA MER2_type 1 536 -695 962 178 11 6 chr10 86718595 86718775 -58870513 - FAM SINE Alu -4 45 1 31 0 0 0 chr10 86718809 86718840 -58870448 + AT_rich Low_complexity Low_complexity 1 31 0 1981 159 0 0 chr10 86718854 86719163 -58870125 + AluSx SINE Alu 1 309 -3 1510 122 0 34 chr10 86719178 86719415 -58869873 - AluJb SINE Alu -83 229 1 1598 166 49 7 chr10 86719416 86719700 -58869588 + Tigger3b DNA MER2_type 934 1229 -2 333 269 109 32 chr10 86719756 86719912 -58869376 - MIR SINE MIR -1 261 94 2178 95 0 0 chr10 86720357 86720653 -58868635 - AluY SINE Alu -7 304 9 198 189 0 0 chr10 86721262 86721299 -58867989 - L2 LINE L2 0 3313 3277 2332 93 0 0 chr10 86721487 86721798 -58867490 + AluY SINE Alu 1 311 0 182 246 35 35 chr10 86722407 86722464 -58866824 - L2 LINE L2 -191 3081 3025 2723 193 72 25 chr10 86722464 86723101 -58866187 - LTR65 LTR ERV1 0 669 3 1088 331 154 9 chr10 86723151 86723937 -58865351 - L2 LINE L2 -337 2977 2078 2404 52 0 10 chr10 86724190 86724495 -58864793 + AluY SINE Alu 1 302 -9 225 0 0 0 chr10 86724549 86724574 -58864714 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 1989 67 21 42 chr10 86724574 86724858 -58864430 - AluSg SINE Alu -32 278 1 395 359 22 17 chr10 86724879 86725060 -58864228 + L2 LINE L2 2866 3047 -225 1860 129 0 4 chr10 86725528 86725806 -58863482 - AluSx SINE Alu 0 312 36 258 233 33 0 chr10 86725817 86725877 -58863411 - AluJ/FRAM SINE Alu -8 294 233 1355 241 37 25 chr10 86726127 86726562 -58862726 - L1MC5 LINE L1 -58 7903 7464 250 299 23 11 chr10 86726573 86726660 -58862628 + L2 LINE L2 3226 3313 0 27 49 0 0 chr10 86727320 86727361 -58861927 + AT_rich Low_complexity Low_complexity 1 41 0 2072 148 46 11 chr10 86727484 86727835 -58861453 + Tigger3(Golem) DNA MER2_type 1 363 -2666 1434 171 27 4 chr10 86727889 86728147 -58861141 - L1MC4a LINE L1 -894 6914 6651 3677 228 48 45 chr10 86728155 86729341 -58859947 - L1MC4a LINE L1 -1218 6590 5402 5192 80 7 6 chr10 86729372 86730062 -58859226 - L1PA10 LINE L1 0 6168 5478 1674 243 37 14 chr10 86730117 86730550 -58858738 + LTR47B LTR ERVL 1 443 0 342 241 15 75 chr10 86730582 86730715 -58858573 - L1MC4a LINE L1 -2430 5378 5254 688 200 109 138 chr10 86730869 86731327 -58857961 - MER110A LTR ERV1 0 468 70 1355 223 0 26 chr10 86731335 86731644 -58857644 - AluJo SINE Alu -11 301 1 2188 95 0 25 chr10 86731725 86732040 -58857248 + AluSx SINE Alu 1 307 -5 483 264 16 24 chr10 86732314 86732439 -58856849 + L2 LINE L2 3190 3313 0 1824 168 7 0 chr10 86732442 86732752 -58856536 + AluJo SINE Alu 1 312 0 1435 198 60 13 chr10 86732985 86733283 -58856005 - AluJb SINE Alu 0 312 1 5079 104 26 0 chr10 86734647 86735377 -58853911 - L1PA16 LINE L1 -9 6157 5409 2120 115 46 17 chr10 86735471 86735820 -58853468 + THE1B LTR MaLR 6 364 0 10437 109 20 28 chr10 86735820 86737413 -58851875 + THE1B-int LTR MaLR 1 1580 0 3862 201 21 50 chr10 86737417 86738415 -58850873 + LTR5 LTR ERVK 1 969 0 2232 115 49 14 chr10 86738418 86738767 -58850521 + THE1B LTR MaLR 2 362 -2 203 0 37 0 chr10 86739090 86739117 -58850171 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 688 181 94 35 chr10 86739163 86739334 -58849954 + MIR SINE MIR 70 250 -12 5579 99 6 6 chr10 86739499 86740317 -58848971 + L1MA2 LINE L1 5485 6302 -2 2391 96 0 0 chr10 86740317 86740610 -58848678 - AluSg SINE Alu -17 293 1 918 312 47 33 chr10 86740651 86741074 -58848214 + L2 LINE L2 2876 3304 -9 18291 165 8 18 chr10 86741098 86745047 -58844241 + L1PA14 LINE L1 1714 5615 -1984 2189 113 3 7 chr10 86745047 86745347 -58843941 - AluSp SINE Alu -14 299 1 18291 165 8 18 chr10 86745347 86746859 -58842429 + L1PA14 LINE L1 5615 7140 -459 3262 87 11 0 chr10 86746989 86747437 -58841851 + L1PA14 LINE L1 7133 7585 -14 190 286 245 0 chr10 86747471 86747569 -58841719 - MIR SINE MIR -117 145 24 908 207 40 34 chr10 86748553 86748954 -58840334 - LTR16A1 LTR ERVL 0 457 7 25 31 0 0 chr10 86749218 86749250 -58840038 + AT_rich Low_complexity Low_complexity 1 32 0 1177 285 113 22 chr10 86749301 86749944 -58839344 + HAL1 LINE L1 23 724 -1783 1350 228 102 68 chr10 86749967 86750643 -58838645 + HAL1 LINE L1 1709 2407 -100 2006 129 3 24 chr10 86750951 86751246 -58838042 + AluJb SINE Alu 1 289 -23 773 114 15 0 chr10 86751246 86751377 -58837911 + (GGAA)n Simple_repeat Simple_repeat 1 133 0 1580 174 48 36 chr10 86751804 86752160 -58837128 + THE1B LTR MaLR 1 360 -4 27 92 0 0 chr10 86752378 86752454 -58836834 + AT_rich Low_complexity Low_complexity 1 76 0 229 122 0 0 chr10 86752749 86752790 -58836498 + L1ME4a LINE L1 6064 6104 -17 1008 168 0 12 chr10 86753322 86753489 -58835799 + FRAM SINE Alu 1 165 -1 978 168 25 0 chr10 86753935 86754096 -58835192 + FRAM SINE Alu 1 165 -1 208 329 233 0 chr10 86754801 86754874 -58834414 - L2 LINE L2 -50 3222 3133 3656 118 0 0 chr10 86756460 86757011 -58832277 - L1PA15 LINE L1 -92 6073 5523 193 340 126 0 chr10 86757833 86757936 -58831352 + MIR SINE MIR 146 261 -1 444 303 54 21 chr10 86758819 86759060 -58830228 - MIR SINE MIR -12 250 2 440 149 0 0 chr10 86759540 86759614 -58829674 - MER116 DNA Mariner -6 74 1 433 305 188 17 chr10 86759641 86760121 -58829167 - L2 LINE L2 -44 3269 2698 421 220 130 0 chr10 86760137 86760237 -58829051 + FLAM_A SINE Alu 4 116 -17 483 204 23 53 chr10 86760271 86760403 -58828885 + L1ME1 LINE L1 6034 6161 -5 919 271 124 65 chr10 86760573 86761053 -58828235 - L2 LINE L2 -604 2710 2187 1246 204 88 62 chr10 86761053 86761405 -58827883 - MLT1A1 LTR MaLR 0 365 5 919 271 124 65 chr10 86761405 86761522 -58827766 - L2 LINE L2 -1127 2187 2078 1131 219 49 50 chr10 86761587 86761968 -58827320 - MLT1B LTR MaLR -4 392 6 773 272 51 20 chr10 86762170 86762365 -58826923 - MIR SINE MIR -12 250 50 1397 148 115 112 chr10 86762560 86762978 -58826310 - MLT1C LTR MaLR -4 463 45 286 295 0 0 chr10 86763517 86763612 -58825676 + L1ME LINE L1 4877 4971 -1175 22 0 0 0 chr10 86763636 86763658 -58825630 + AT_rich Low_complexity Low_complexity 1 22 0 283 192 25 16 chr10 86763897 86764019 -58825269 + L1ME LINE L1 5268 5395 -767 201 244 0 0 chr10 86764043 86764084 -58825204 + MIR3 SINE MIR 161 201 -7 229 207 17 0 chr10 86764248 86764306 -58824982 - MLT1K LTR MaLR -8 580 522 371 205 36 0 chr10 86765086 86765169 -58824119 + MLT1K LTR MaLR 482 567 -21 300 53 0 0 chr10 86765389 86765427 -58823861 + (CA)n Simple_repeat Simple_repeat 2 39 0 1485 194 136 70 chr10 86765585 86765620 -58823668 - MLT1F1 LTR MaLR -14 553 522 2571 54 0 0 chr10 86765620 86765917 -58823371 - AluY SINE Alu -14 297 1 1485 194 136 70 chr10 86765917 86766397 -58822891 - MLT1F1 LTR MaLR -45 522 4 1225 75 0 70 chr10 86766998 86767197 -58822091 - MER30B DNA MER1_type 0 190 6 395 131 143 0 chr10 86767371 86767455 -58821833 + MER5B DNA MER1_type 1 96 -82 438 219 166 64 chr10 86767549 86767713 -58821575 + MER5A DNA MER1_type 6 188 -1 454 206 63 40 chr10 86767873 86767999 -58821289 + MER91B DNA MER1_type 2 130 -60 234 279 101 13 chr10 86768022 86768101 -58821187 + MER91B DNA MER1_type 104 189 -1 207 139 0 0 chr10 86768568 86768604 -58820684 + (TTTC)n Simple_repeat Simple_repeat 1 36 0 315 338 19 5 chr10 86768642 86768858 -58820430 + L1ME4a LINE L1 5664 5882 -239 454 235 25 13 chr10 86768948 86769057 -58820231 + MER5A DNA MER1_type 18 118 -60 216 292 90 48 chr10 86769985 86770186 -58819102 + MIR SINE MIR 34 247 -15 426 281 15 30 chr10 86771805 86772004 -58817284 + L1ME LINE L1 5523 5718 -403 22 35 0 0 chr10 86772122 86772151 -58817137 + AT_rich Low_complexity Low_complexity 1 29 0 311 153 0 0 chr10 86772443 86772502 -58816786 + L1ME4a LINE L1 6063 6121 0 542 273 8 0 chr10 86773119 86773240 -58816048 - L2 LINE L2 -1 3312 3191 305 155 0 0 chr10 86773269 86773327 -58815961 + L1ME4a LINE L1 6063 6120 -1 990 326 77 40 chr10 86773415 86773873 -58815415 - L2 LINE L2 -191 3122 2625 2006 158 0 0 chr10 86773873 86774176 -58815112 + AluJo SINE Alu 1 303 -9 990 326 77 40 chr10 86774176 86774473 -58814815 - L2 LINE L2 -688 2625 2341 24 32 0 0 chr10 86774854 86774885 -58814403 + AT_rich Low_complexity Low_complexity 1 31 0 2429 76 0 16 chr10 86774893 86775209 -58814079 + AluY SINE Alu 1 311 0 4195 90 11 8 chr10 86775492 86776112 -58813176 - L1MA3 LINE L1 0 6305 5684 974 250 119 44 chr10 86776696 86777202 -58812086 + L2 LINE L2 2786 3311 -2 729 306 54 12 chr10 86777859 86778101 -58811187 - MIR SINE MIR 0 262 11 313 302 43 17 chr10 86778292 86778408 -58810880 - L2 LINE L2 0 3313 3195 2061 146 7 7 chr10 86778467 86778776 -58810512 + AluSx SINE Alu 1 309 -3 473 246 99 72 chr10 86778781 86779114 -58810174 + L1ME4a LINE L1 5602 5943 -178 249 217 17 0 chr10 86779137 86779197 -58810091 - MER116 DNA Mariner -6 74 14 285 29 0 0 chr10 86780064 86780098 -58809190 + (CA)n Simple_repeat Simple_repeat 2 35 0 365 323 105 61 chr10 86780105 86780656 -58808632 - L2 LINE L2 -20 3293 2676 308 249 0 122 chr10 86780689 86780886 -58808402 + L1MC5 LINE L1 7740 7912 -49 501 308 121 18 chr10 86780912 86781136 -58808152 + MIR SINE MIR 16 262 0 531 113 0 0 chr10 86781164 86781244 -58808044 + (TG)n Simple_repeat Simple_repeat 1 80 0 300 50 0 0 chr10 86781245 86781262 -58808026 + (TA)n Simple_repeat Simple_repeat 2 18 -23 1887 151 31 3 chr10 86781262 86781553 -58807735 - AluSx SINE Alu -12 300 2 300 50 0 0 chr10 86781553 86781575 -58807713 + (TA)n Simple_repeat Simple_repeat 17 41 0 981 205 121 0 chr10 86781809 86782098 -58807190 - Charlie4a DNA MER1_type -15 493 169 650 269 60 16 chr10 86782098 86782456 -58806832 - LTR16A LTR ERVL 0 450 25 685 200 85 24 chr10 86782480 86782645 -58806643 - Charlie4a DNA MER1_type -333 175 1 1513 185 3 64 chr10 86784784 86785113 -58804175 - AluJo SINE Alu -3 309 1 2501 160 24 5 chr10 86785189 86785613 -58803675 + MSTB1 LTR MaLR 1 432 0 1063 292 48 35 chr10 86785620 86786076 -58803212 + L2 LINE L2 2819 3280 -33 210 222 0 125 chr10 86786093 86786133 -58803155 + L2 LINE L2 3246 3275 -38 1705 146 20 53 chr10 86786133 86786299 -58802989 - AluJo SINE Alu -15 297 144 1710 58 5 5 chr10 86786299 86786507 -58802781 - AluY SINE Alu -11 300 93 1705 146 20 53 chr10 86786507 86786641 -58802647 - AluJo SINE Alu -168 144 7 210 222 0 125 chr10 86786641 86786672 -58802616 + L2 LINE L2 3275 3308 -5 228 213 0 0 chr10 86787112 86787173 -58802115 + (TA)n Simple_repeat Simple_repeat 2 62 0 337 273 23 0 chr10 86787176 86787264 -58802024 + L1MC4 LINE L1 6614 6703 -1339 204 273 0 0 chr10 86787265 86787342 -58801946 + (TA)n Simple_repeat Simple_repeat 2 78 0 2544 114 0 10 chr10 86787473 86787858 -58801430 + L1PA13 LINE L1 5777 6157 -6 759 157 15 0 chr10 86787951 86788085 -58801203 + AluSg/x SINE Alu 166 301 -9 262 188 0 0 chr10 86788929 86788993 -58800295 - L1MA2 LINE L1 0 6304 6241 22 0 0 0 chr10 86789427 86789449 -58799839 + AT_rich Low_complexity Low_complexity 1 22 0 1727 70 4 0 chr10 86789993 86790220 -58799068 + L1PA6 LINE L1 5920 6147 -7 563 221 105 64 chr10 86790721 86791175 -58798113 + L1ME LINE L1 4983 5455 -711 * 1334 292 20 4 chr10 86791174 86791630 -58797658 + L1ME1 LINE L1 5336 5798 -368 378 0 0 0 chr10 86791634 86791676 -58797612 + (CA)n Simple_repeat Simple_repeat 1 42 0 3673 202 56 40 chr10 86791680 86792998 -58796290 + L1MC2 LINE L1 4898 6335 -9 588 278 55 29 chr10 86792999 86793344 -58795944 + L1ME1 LINE L1 5811 6164 -2 21 36 0 0 chr10 86793873 86793901 -58795387 + AT_rich Low_complexity Low_complexity 1 28 0 2200 105 0 10 chr10 86795416 86795756 -58793532 - AluSq SINE Alu 0 313 1 2542 43 0 3 chr10 86796305 86796606 -58792682 + AluY SINE Alu 1 300 -11 26 0 0 0 chr10 86796856 86796882 -58792406 + AT_rich Low_complexity Low_complexity 1 26 0 22 35 0 0 chr10 86797666 86797695 -58791593 + AT_rich Low_complexity Low_complexity 1 29 0 364 114 14 14 chr10 86797762 86797832 -58791456 - L1MA8 LINE L1 -211 6080 6011 528 328 136 14 chr10 86797963 86798332 -58790956 + L2 LINE L2 2440 2853 -461 2390 192 130 18 chr10 86798490 86799090 -58790198 + LTR65 LTR ERV1 3 669 0 185 246 35 35 chr10 86799090 86799147 -58790141 + L2 LINE L2 3025 3081 -191 21 0 0 0 chr10 86799533 86799554 -58789734 + AT_rich Low_complexity Low_complexity 1 21 0 2301 78 0 0 chr10 86799740 86800071 -58789217 - AluY SINE Alu 0 331 1 193 189 0 0 chr10 86800259 86800296 -58788992 + L2 LINE L2 3277 3313 0 2256 101 0 0 chr10 86800905 86801201 -58788087 + AluY SINE Alu 9 304 -7 325 314 77 0 chr10 86801646 86801802 -58787486 + MIR SINE MIR 94 261 -1 1469 172 46 7 chr10 86801858 86802143 -58787145 - Tigger3b DNA MER2_type -2 1229 934 1527 118 0 65 chr10 86802144 86802389 -58786899 + AluJb SINE Alu 1 229 -83 2070 162 0 0 chr10 86802404 86802712 -58786576 - AluSx SINE Alu -4 308 1 2917 152 44 46 chr10 86802712 86802791 -58786497 - Tigger3b DNA MER2_type -2425 603 525 968 184 11 6 chr10 86802791 86802965 -58786323 + FAM SINE Alu 1 175 0 2917 152 44 46 chr10 86802965 86803487 -58785801 - Tigger3b DNA MER2_type -2503 525 1 1728 183 138 31 chr10 86803566 86803628 -58785660 - MLT1D LTR MaLR -4 501 447 1887 154 3 19 chr10 86803628 86803939 -58785349 + AluJb SINE Alu 1 306 -6 1728 183 138 31 chr10 86803939 86804324 -58784964 - MLT1D LTR MaLR -58 447 6 1177 177 23 9 chr10 86804685 86804900 -58784388 - AluJo SINE Alu -6 306 89 936 146 12 0 chr10 86804907 86805071 -58784217 + MSTB1 LTR MaLR 23 188 -244 604 154 0 0 chr10 86805089 86805180 -58784108 - AluJo SINE Alu -221 91 1 1518 141 12 0 chr10 86805181 86805423 -58783865 + MSTB1 LTR MaLR 175 419 -13 1825 156 33 33 chr10 86805440 86805832 -58783456 - L1MB4 LINE L1 -32 6148 5757 872 153 0 0 chr10 86805842 86805973 -58783315 - AluSq/x SINE Alu -182 131 1 7342 209 44 39 chr10 86805973 86806097 -58783191 - L1MB4 LINE L1 -405 5769 5647 2205 146 53 15 chr10 86806097 86806509 -58782779 - MSTA LTR MaLR 0 428 1 7342 209 44 39 chr10 86806509 86806866 -58782422 - L1MB4 LINE L1 -527 5647 5293 285 119 0 0 chr10 86806866 86806908 -58782380 - MSTA LTR MaLR 0 428 387 7342 209 44 39 chr10 86806908 86809028 -58780260 - L1MB4 LINE L1 -881 5293 3118 2332 147 50 12 chr10 86809431 86809847 -58779441 + MSTB1 LTR MaLR 1 432 0 556 288 82 16 chr10 86810363 86810606 -58778682 - MLT1L LTR MaLR -33 582 324 468 339 31 39 chr10 86810902 86811162 -58778126 + L2 LINE L2 719 976 -2338 633 259 101 16 chr10 86811172 86811419 -58777869 - MLT1L LTR MaLR -337 278 11 311 348 12 37 chr10 86811558 86811722 -58777566 + MIR SINE MIR 49 208 -54 901 165 0 49 chr10 86812322 86812486 -58776802 + AluSc SINE Alu 128 283 -26 2557 45 0 10 chr10 86812973 86813281 -58776007 + AluY SINE Alu 1 305 -6 500 312 55 15 chr10 86813998 86814197 -58775091 - MIR SINE MIR -37 225 19 2308 107 0 7 chr10 86814358 86814658 -58774630 - AluSq SINE Alu -15 298 1 386 363 84 16 chr10 86814964 86815284 -58774004 + L2 LINE L2 1286 1627 -1687 362 197 263 36 chr10 86815794 86815931 -58773357 - MIR SINE MIR -82 180 13 254 294 10 49 chr10 86817273 86817375 -58771913 - MER5A DNA MER1_type -89 100 3 306 256 122 79 chr10 86817727 86817981 -58771307 + L1M2 LINE L1 702 966 -5883 218 299 52 41 chr10 86818686 86818783 -58770505 - L2 LINE L2 0 3313 3216 256 297 0 0 chr10 86819157 86819221 -58770067 - MIR3 SINE MIR -33 175 112 595 303 138 9 chr10 86819319 86819550 -58769738 - MIR SINE MIR 0 262 2 21 0 0 0 chr10 86820660 86820681 -58768607 + AT_rich Low_complexity Low_complexity 1 21 0 440 195 168 26 chr10 86821976 86822089 -58767199 + MER94 DNA DNA 3 131 -3 245 216 0 0 chr10 86822339 86822390 -58766898 - MER5B DNA MER1_type -7 171 121 841 286 27 31 chr10 86822920 86823179 -58766109 + MIR SINE MIR 2 259 -3 262 321 69 0 chr10 86825068 86825199 -58764089 - MIR3 SINE MIR -36 172 33 413 230 75 79 chr10 86825380 86825561 -58763727 + MIR SINE MIR 1 174 -65 2090 133 17 0 chr10 86825891 86826193 -58763095 - AluSq SINE Alu -6 307 1 299 305 59 54 chr10 86826369 86826572 -58762716 - L2 LINE L2 -1406 1908 1705 230 207 0 17 chr10 86826626 86826684 -58762604 - LTR67 LTR ERVL -10 547 491 2188 116 0 29 chr10 86826685 86826995 -58762293 + AluSx SINE Alu 1 301 -11 989 188 6 0 chr10 86826995 86827171 -58762117 + AluSc SINE Alu 132 308 -1 189 0 0 0 chr10 86828287 86828308 -58760980 + (GCTG)n Simple_repeat Simple_repeat 4 24 0 1073 248 108 14 chr10 86828637 86829065 -58760223 + MLT1J LTR MaLR 4 471 -40 438 20 0 0 chr10 86829659 86829710 -58759578 + (CATAT)n Simple_repeat Simple_repeat 4 54 0 30 0 0 0 chr10 86829968 86829998 -58759290 + AT_rich Low_complexity Low_complexity 1 30 0 1184 107 146 5 chr10 86830297 86830503 -58758785 + MER46A DNA MER2_type 2 236 0 706 191 0 8 chr10 86830691 86830817 -58758471 + FLAM_A SINE Alu 1 125 -8 922 129 14 0 chr10 86831157 86831296 -58757992 + FLAM_C SINE Alu 1 141 -2 303 203 58 0 chr10 86831749 86831818 -58757470 + MLT1J LTR MaLR 394 466 -45 369 324 29 9 chr10 86832082 86832292 -58756996 + MLT1K LTR MaLR 374 587 -1 564 224 60 16 chr10 86832912 86833095 -58756193 - MLT1K LTR MaLR 0 588 398 2135 93 0 0 chr10 86833210 86833511 -58755777 - AluSx SINE Alu 0 314 14 328 257 20 3 chr10 86833587 86833758 -58755530 - MLT1K LTR MaLR -359 229 4 628 259 132 74 chr10 86834559 86834764 -58754524 - MLT1I LTR MaLR -7 402 210 2864 142 12 10 chr10 86834764 86835250 -58754038 - L1PA16 LINE L1 -5 6161 5675 628 259 132 74 chr10 86835250 86835423 -58753865 - MLT1I LTR MaLR -199 210 2 228 293 32 38 chr10 86835599 86835756 -58753532 + MLT1J LTR MaLR 258 413 -98 476 264 3 2 chr10 86835917 86836041 -58753247 + MIR SINE MIR 30 154 -54 273 294 40 56 chr10 86836310 86836436 -58752852 + MLT1L LTR MaLR 410 533 -82 315 206 48 30 chr10 86836512 86836624 -58752664 + HsTC2 DNA Tc2 1781 1895 -3 2276 111 3 0 chr10 86836740 86837047 -58752241 + AluSq SINE Alu 1 308 -5 253 254 0 28 chr10 86838305 86838376 -58750912 - MLT1H LTR MaLR -374 175 107 2544 137 47 5 chr10 86838389 86838798 -58750490 + MSTB LTR MaLR 1 426 0 605 270 103 69 chr10 86840675 86841141 -58748147 - MLT1K LTR MaLR -97 491 10 197 206 281 0 chr10 86841979 86842083 -58747205 + MIR SINE MIR 15 150 -58 607 153 114 30 chr10 86843379 86843510 -58745778 + MLT1D LTR MaLR 14 155 -350 4088 80 26 4 chr10 86843512 86844047 -58745241 - LTR6A LTR ERV1 -17 547 1 753 209 240 28 chr10 86844047 86844324 -58744964 + MLT1D LTR MaLR 169 505 0 265 248 56 96 chr10 86845219 86845344 -58743944 - MIR SINE MIR -127 135 16 498 270 37 18 chr10 86847314 86847477 -58741811 - MIR SINE MIR -77 185 20 492 18 0 0 chr10 86847494 86847551 -58741737 + (TG)n Simple_repeat Simple_repeat 2 58 0 182 262 82 0 chr10 86848061 86848122 -58741166 - MIR SINE MIR -80 182 117 452 224 28 9 chr10 86850235 86850342 -58738946 - MER5A DNA MER1_type -77 112 4 216 250 150 30 chr10 86851080 86851180 -58738108 + MIR3 SINE MIR 45 156 -52 305 327 96 21 chr10 86851501 86851782 -58737506 - L3 LINE CR1 -87 1490 1189 197 204 45 23 chr10 86852713 86852757 -58736531 - MIR SINE MIR -76 132 88 1497 121 5 5 chr10 86852822 86853045 -58736243 + AluSx SINE Alu 1 223 -89 198 0 0 0 chr10 86853055 86853077 -58736211 + (A)n Simple_repeat Simple_repeat 1 22 0 2363 71 0 0 chr10 86853078 86853372 -58735916 + AluY SINE Alu 1 294 -17 2117 117 7 0 chr10 86853378 86853685 -58735603 + AluSc SINE Alu 1 309 0 2285 92 0 9 chr10 86855494 86855810 -58733478 - AluSq SINE Alu 0 313 1 2158 69 0 17 chr10 86856002 86856322 -58732966 - AluY SINE Alu 0 315 1 966 185 181 32 chr10 86856773 86857238 -58732050 - L1M4b LINE L1 -1479 5478 4945 723 201 46 23 chr10 86857240 86857414 -58731874 + L1M4 LINE L1 4141 4318 -1828 * 766 251 79 68 chr10 86857413 86857780 -58731508 - L1M4b LINE L1 -2001 4956 4586 198 0 0 0 chr10 86857867 86857889 -58731399 + (TAAAA)n Simple_repeat Simple_repeat 5 26 0 1454 204 32 0 chr10 86857898 86858206 -58731082 + AluJb SINE Alu 1 317 0 218 79 0 26 chr10 86858260 86858298 -58730990 + (TAAA)n Simple_repeat Simple_repeat 4 40 0 1089 216 48 12 chr10 86858372 86858705 -58730583 - L1M4b LINE L1 -3435 3522 3178 355 296 60 36 chr10 86858769 86859219 -58730069 - L1M4b LINE L1 -4078 3060 2600 441 271 59 44 chr10 86859225 86859372 -58729916 - L1M4b LINE L1 -4440 2517 2374 1813 156 23 7 chr10 86859372 86859679 -58729609 - AluJb SINE Alu 0 312 1 441 271 59 44 chr10 86859679 86859871 -58729417 - L1M4b LINE L1 -4583 2374 2173 352 155 258 21 chr10 86859878 86859975 -58729313 + FLAM_C SINE Alu 9 128 -5 227 250 50 0 chr10 86859980 86860040 -58729248 + GA-rich Low_complexity Low_complexity 2 64 0 553 248 85 43 chr10 86860058 86860123 -58729165 - L1M4b LINE L1 -4928 2210 2149 2099 107 0 13 chr10 86860123 86860431 -58728857 + AluSx SINE Alu 1 304 -8 553 248 85 43 chr10 86860431 86860834 -58728454 - L1M4b LINE L1 -4989 2149 1582 2037 75 16 75 chr10 86861950 86862133 -58727155 - AluSp SINE Alu -11 302 145 2296 76 7 0 chr10 86862133 86862434 -58726854 - AluSp SINE Alu -10 303 1 2037 75 16 75 chr10 86862434 86862571 -58726717 - AluSp SINE Alu -168 145 1 437 287 19 32 chr10 86862752 86862909 -58726379 - MLT1H LTR MaLR -387 162 8 233 297 47 47 chr10 86863161 86863289 -58725999 - LTR33A LTR ERVL -339 184 57 486 260 67 10 chr10 86864302 86864510 -58724778 - L1MC/D LINE L1 -2332 5476 5257 427 310 111 5 chr10 86864548 86864764 -58724524 - L1MC/D LINE L1 -892 5254 5016 269 251 211 51 chr10 86864863 86865038 -58724250 - MIR3 SINE MIR -1 207 5 203 308 8 34 chr10 86865721 86865838 -58723450 + CT-rich Low_complexity Low_complexity 2 115 0 776 126 25 0 chr10 86866070 86866189 -58723099 + FRAM SINE Alu 46 167 -9 326 325 165 15 chr10 86866201 86866401 -58722887 - L3 LINE CR1 -193 1384 1155 21 0 0 0 chr10 86866587 86866608 -58722680 + AT_rich Low_complexity Low_complexity 1 21 0 258 320 64 16 chr10 86866839 86866964 -58722324 - MIR3 SINE MIR -10 198 68 1544 201 106 75 chr10 86866992 86867072 -58722216 - L1MC4 LINE L1 -48 7994 7918 1880 194 111 40 chr10 86867072 86867541 -58721747 - MLT1D LTR MaLR 0 505 4 1544 201 106 75 chr10 86867541 86868056 -58721232 - L1MC4 LINE L1 -124 7918 7381 2123 104 0 0 chr10 86868064 86868353 -58720935 - AluSx SINE Alu -23 289 1 1760 137 3 18 chr10 86868478 86868762 -58720526 - AluSx SINE Alu -32 280 1 229 62 12 86 chr10 86869223 86869304 -58719984 + (TA)n Simple_repeat Simple_repeat 1 75 0 507 280 108 55 chr10 86870311 86870897 -58718391 + L1M4 LINE L1 2760 3452 -2694 259 256 77 0 chr10 86870997 86871075 -58718213 + L2 LINE L2 2888 2971 -342 2957 110 11 7 chr10 86871090 86871525 -58717763 + L1PA13 LINE L1 5721 6157 -6 297 276 69 23 chr10 86871625 86871712 -58717576 - FRAM/FAM SINE Alu -83 83 1 36 62 0 0 chr10 86871909 86871973 -58717315 + AT_rich Low_complexity Low_complexity 1 64 0 22 0 0 0 chr10 86872299 86872321 -58716967 + AT_rich Low_complexity Low_complexity 1 22 0 642 336 75 21 chr10 86873407 86873845 -58715443 - L2 LINE L2 -274 3039 2570 30 59 0 0 chr10 86873920 86873971 -58715317 + AT_rich Low_complexity Low_complexity 1 51 0 42 77 0 0 chr10 86874541 86874632 -58714656 + AT_rich Low_complexity Low_complexity 1 91 0 29 0 0 0 chr10 86874737 86874766 -58714522 + AT_rich Low_complexity Low_complexity 1 29 0 252 0 0 0 chr10 86874853 86874881 -58714407 + (TAAA)n Simple_repeat Simple_repeat 4 31 0 683 260 76 22 chr10 86875026 86875249 -58714039 + MIR SINE MIR 28 262 0 719 222 127 16 chr10 86875316 86875505 -58713783 - MER20 DNA MER1_type -4 215 6 2322 161 33 21 chr10 86876703 86877126 -58712162 + MSTC LTR MaLR 1 428 0 2001 144 37 6 chr10 86877806 86878133 -58711155 - MER1B DNA MER1_type 0 337 1 204 271 34 0 chr10 86878483 86878542 -58710746 - MIR SINE MIR 0 262 202 2140 88 57 0 chr10 86878808 86879104 -58710184 - AluSp SINE Alu 0 313 1 24 0 0 0 chr10 86880549 86880573 -58708715 + AT_rich Low_complexity Low_complexity 1 24 0 26 30 0 0 chr10 86882379 86882412 -58706876 + AT_rich Low_complexity Low_complexity 1 33 0 197 240 80 0 chr10 86883272 86883322 -58705966 - L2 LINE L2 -18 3254 3201 275 310 42 0 chr10 86884117 86884188 -58705100 + MER91C DNA MER1_type 25 98 -42 2390 67 0 13 chr10 86885937 86886252 -58703036 + AluY SINE Alu 1 311 0 1430 143 0 9 chr10 86886521 86886744 -58702544 - AluSx SINE Alu -91 221 1 317 302 43 17 chr10 86886803 86886919 -58702369 + L2 LINE L2 3195 3313 0 750 306 54 12 chr10 86887110 86887352 -58701936 + MIR SINE MIR 11 262 0 976 252 117 41 chr10 86888009 86888515 -58700773 - L2 LINE L2 -2 3311 2786 4586 87 11 8 chr10 86889099 86889719 -58699569 + L1MA3 LINE L1 5684 6305 0 2472 76 0 13 chr10 86890001 86890316 -58698972 - AluY SINE Alu 0 311 1 24 32 0 0 chr10 86890324 86890355 -58698933 + AT_rich Low_complexity Low_complexity 1 31 0 922 325 77 44 chr10 86890736 86891033 -58698255 + L2 LINE L2 2341 2627 -686 1988 158 0 0 chr10 86891033 86891336 -58697952 - AluJo SINE Alu -9 303 1 922 325 77 44 chr10 86891336 86891794 -58697494 + L2 LINE L2 2627 3122 -191 336 155 0 0 chr10 86891882 86891940 -58697348 - L1ME4a LINE L1 -1 6120 6063 506 289 8 0 chr10 86891969 86892090 -58697198 + L2 LINE L2 3191 3312 -1 342 153 0 0 chr10 86892707 86892766 -58696522 - L1ME4a LINE L1 0 6121 6063 22 35 0 0 chr10 86893058 86893087 -58696201 + AT_rich Low_complexity Low_complexity 1 29 0 550 299 51 32 chr10 86893090 86893404 -58695884 - L1ME4a LINE L1 -279 5842 5523 221 280 96 42 chr10 86895023 86895238 -58694050 - MIR SINE MIR -15 247 21 446 245 25 13 chr10 86896152 86896261 -58693027 - MER5A DNA MER1_type -60 118 18 434 336 14 5 chr10 86896351 86896568 -58692720 - L1ME4a LINE L1 -239 5882 5664 213 154 0 0 chr10 86896603 86896642 -58692646 + GA-rich Low_complexity Low_complexity 2 40 0 221 246 116 14 chr10 86897121 86897190 -58692098 - MER91B DNA MER1_type -11 179 104 431 214 63 40 chr10 86897213 86897339 -58691949 - MER91B DNA MER1_type -60 130 2 435 219 166 64 chr10 86897499 86897663 -58691625 - MER5A DNA MER1_type -1 188 6 380 143 143 0 chr10 86897757 86897841 -58691447 - MER5B DNA MER1_type -82 96 1 1392 72 0 87 chr10 86898010 86898218 -58691070 + MER30B DNA MER1_type 1 190 0 1768 188 136 68 chr10 86898819 86899298 -58689990 + MLT1F1 LTR MaLR 4 522 -45 2594 48 0 0 chr10 86899298 86899593 -58689695 + AluY SINE Alu 1 295 -16 1768 188 136 68 chr10 86899593 86899628 -58689660 + MLT1F1 LTR MaLR 522 553 -14 300 53 0 0 chr10 86899786 86899824 -58689464 + (TG)n Simple_repeat Simple_repeat 2 39 0 409 209 35 0 chr10 86900045 86900131 -58689157 - MLT1K LTR MaLR -18 570 482 253 207 17 0 chr10 86900911 86900969 -58688319 + MLT1K LTR MaLR 522 580 -8 201 244 0 0 chr10 86901133 86901174 -58688114 - MIR3 SINE MIR -7 201 161 300 258 68 38 chr10 86901198 86901700 -58687588 - L1ME4a LINE L1 -751 5395 4877 1516 146 117 117 chr10 86902239 86902658 -58686630 + MLT1C LTR MaLR 45 463 -4 781 251 55 22 chr10 86902867 86903050 -58686238 + MIR SINE MIR 64 252 -10 1345 217 54 54 chr10 86903245 86903632 -58685656 + MLT1B LTR MaLR 4 390 0 913 253 155 64 chr10 86903693 86903810 -58685478 + L2 LINE L2 2078 2183 -1131 1436 199 88 62 chr10 86903810 86904162 -58685126 + MLT1A1 LTR MaLR 5 365 0 913 253 155 64 chr10 86904162 86904624 -58684664 + L2 LINE L2 2183 2710 -604 492 220 23 53 chr10 86904793 86904925 -58684363 - L1ME1 LINE L1 -5 6161 6034 450 208 129 0 chr10 86904959 86905060 -58684228 - FLAM_C SINE Alu -16 117 4 24 67 0 0 chr10 86905752 86905797 -58683491 + AT_rich Low_complexity Low_complexity 1 45 0 23 0 0 0 chr10 86906033 86906056 -58683232 + AT_rich Low_complexity Low_complexity 1 23 0 514 269 91 19 chr10 86906318 86906526 -58682762 - L1ME1 LINE L1 -251 5919 5697 628 172 0 0 chr10 86906654 86906747 -58682541 - AluJ/FLAM SINE Alu -219 93 1 301 259 82 30 chr10 86906753 86906888 -58682400 + L1ME1 LINE L1 6021 6162 -4 2035 155 30 47 chr10 86907152 86907185 -58682103 - L1MB7 LINE L1 0 6184 6152 14645 118 47 60 chr10 86907185 86908112 -58681176 - Tigger1 DNA MER2_type -1 2417 1480 2090 60 4 34 chr10 86908112 86908381 -58680907 - AluY SINE Alu -12 299 39 14645 118 47 60 chr10 86908381 86909901 -58679387 - Tigger1 DNA MER2_type -938 1480 1 2035 155 30 47 chr10 86909901 86910293 -58678995 - L1MB7 LINE L1 -32 6152 5766 7448 44 5 0 chr10 86910301 86911865 -58677423 - L1PA5 LINE L1 0 6154 4596 780 248 79 50 chr10 86911969 86912367 -58676921 + L1MC4a LINE L1 5509 5871 -299 198 0 0 0 chr10 86912367 86912389 -58676899 + (CA)n Simple_repeat Simple_repeat 2 23 0 780 248 79 50 chr10 86912389 86912445 -58676843 + L1MC4a LINE L1 5871 5924 -246 2318 178 34 11 chr10 86912804 86913242 -58676046 + MER21A-int LTR ERV1 3744 4191 0 3079 142 83 17 chr10 86913242 86914000 -58675288 + MER21A LTR ERV1 1 931 0 21 0 0 0 chr10 86914166 86914187 -58675101 + AT_rich Low_complexity Low_complexity 1 21 0 2462 71 0 0 chr10 86914188 86914485 -58674803 + AluY SINE Alu 1 297 -14 1447 131 0 0 chr10 86914485 86914683 -58674605 + AluSq SINE Alu 1 198 -115 622 261 76 0 chr10 86914685 86914895 -58674393 + L1ME3A LINE L1 5628 5852 -318 421 245 90 19 chr10 86914914 86915069 -58674219 - L1ME1 LINE L1 -5 6161 5996 1217 114 0 0 chr10 86915274 86915449 -58673839 - L1PA13 LINE L1 -61 6102 5928 342 209 27 64 chr10 86915450 86915560 -58673728 + L1PA13 LINE L1 5851 5956 -214 411 165 79 63 chr10 86916176 86916303 -58672985 + MER51D LTR ERV1 501 629 -28 1761 144 26 26 chr10 86916464 86916776 -58672512 + L1MC2 LINE L1 5679 5990 -354 1164 247 18 16 chr10 86916764 86917184 -58672104 + L1PA12 LINE L1 1223 1713 -5868 * 3903 190 13 57 chr10 86917204 86918646 -58670642 + L1PA12 LINE L1 2411 3744 -3840 441 211 0 0 chr10 86918968 86919044 -58670244 + Tigger5 DNA MER2_type 3 78 -2245 323 228 0 0 chr10 86919046 86919103 -58670185 - Tigger5 DNA MER2_type -5 2318 2262 * 441 198 25 0 chr10 86919096 86919177 -58670111 + Tigger5 DNA MER2_type 2241 2323 0 253 301 72 12 chr10 86919261 86919344 -58669944 + L2 LINE L2 3176 3263 -9 2364 95 0 0 chr10 86919423 86919729 -58669559 + AluSx SINE Alu 1 306 -6 573 226 59 21 chr10 86919738 86919924 -58669364 - L1MC5 LINE L1 -49 7912 7720 2389 110 0 0 chr10 86920137 86920447 -58668841 - AluSx SINE Alu -2 310 1 400 272 207 23 chr10 86920589 86920806 -58668482 - MLT1H LTR MaLR -290 259 3 398 322 106 18 chr10 86921265 86921492 -58667796 - MIR SINE MIR 0 262 16 317 243 107 19 chr10 86921562 86921665 -58667623 + L2 LINE L2 3193 3304 -9 257 284 49 0 chr10 86922781 86922862 -58666426 + L2 LINE L2 3188 3272 0 325 272 0 12 chr10 86923299 86923380 -58665908 + MER5A DNA MER1_type 56 135 -54 4104 162 121 100 chr10 86923515 86924099 -58665189 - L1MC3 LINE L1 -1 7784 7214 304 206 27 14 chr10 86924099 86924172 -58665116 - MLT1F1 LTR MaLR -459 108 35 4104 162 121 100 chr10 86924172 86924546 -58664742 - L1MC3 LINE L1 -571 7214 6725 2494 55 0 10 chr10 86924546 86924856 -58664432 + AluY SINE Alu 1 307 -4 4104 162 121 100 chr10 86924856 86924969 -58664319 - L1MC3 LINE L1 -1060 6725 6616 283 206 176 15 chr10 86924969 86925036 -58664252 + Tigger5 DNA MER2_type 1 78 -2245 451 192 13 0 chr10 86925036 86925114 -58664174 - Tigger5 DNA MER2_type -3 2320 2242 335 206 123 0 chr10 86925104 86925177 -58664111 + Tigger5 DNA MER2_type 2242 2323 0 * 2833 191 8 6 chr10 86925177 86925701 -58663587 - L1MC3 LINE L1 -1180 6605 6081 347 87 0 0 chr10 86925702 86925748 -58663540 + AluSp SINE Alu 1 46 -256 216 0 0 0 chr10 86928271 86928295 -58660993 + (T)n Simple_repeat Simple_repeat 1 24 0 225 270 101 22 chr10 86929539 86929628 -58659660 - L2 LINE L2 -31 3241 3146 2178 108 0 0 chr10 86931453 86931741 -58657547 + AluSc SINE Alu 1 288 -21 300 53 0 0 chr10 86932861 86932899 -58656389 + (TG)n Simple_repeat Simple_repeat 2 39 0 54 29 0 0 chr10 86933195 86933263 -58656025 + AT_rich Low_complexity Low_complexity 1 68 0 281 227 121 0 chr10 86933806 86933872 -58655416 - MER58A DNA MER1_type -33 74 1 194 366 59 25 chr10 86934048 86934250 -58655038 - L2 LINE L2 -338 2976 2768 833 249 11 0 chr10 86935131 86935316 -58653972 + MER5A DNA MER1_type 1 187 -2 211 335 169 26 chr10 86935358 86935624 -58653664 + L3b LINE CR1 1278 1581 -2 755 172 13 7 chr10 86935696 86935847 -58653441 + L1MB3 LINE L1 6031 6182 -1 369 62 0 0 chr10 86936070 86936118 -58653170 + (T)n Simple_repeat Simple_repeat 1 48 0 401 324 11 11 chr10 86937205 86937384 -58651904 + (TATG)n Simple_repeat Simple_repeat 2 180 0 * 439 324 12 6 chr10 86937269 86937442 -58651846 + (TG)n Simple_repeat Simple_repeat 1 174 0 1842 106 4 0 chr10 86938027 86938264 -58651024 + AluSp SINE Alu 47 284 -29 267 122 0 0 chr10 86938223 86938264 -58651024 + AluSp/q SINE Alu 244 311 0 190 74 0 0 chr10 86938264 86938291 -58650997 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 555 206 103 36 chr10 86938502 86938816 -58650472 + MLT1G3 LTR MaLR 189 554 -1 2418 107 30 30 chr10 86940157 86940521 -58648767 + THE1B LTR MaLR 1 364 0 279 0 0 0 chr10 86943064 86943095 -58646193 + (CA)n Simple_repeat Simple_repeat 2 32 0 2377 64 17 17 chr10 86943652 86943949 -58645339 - AluY SINE Alu -14 297 1 21 0 0 0 chr10 86944466 86944487 -58644801 + AT_rich Low_complexity Low_complexity 1 21 0 1862 132 14 0 chr10 86945947 86946243 -58643045 + AluJb SINE Alu 11 310 -2 2314 91 3 3 chr10 86946857 86947154 -58642134 + AluSx SINE Alu 1 297 -15 1239 125 0 5 chr10 86947155 86947339 -58641949 + AluSg/x SINE Alu 126 308 -4 2000 171 53 15 chr10 86948115 86948513 -58640775 + MER31A LTR ERV1 1 413 -72 235 250 16 0 chr10 86948903 86948967 -58640321 + MER5A DNA MER1_type 1 65 -124 2108 105 11 3 chr10 86948978 86949263 -58640025 + AluSc SINE Alu 6 292 -17 233 333 0 0 chr10 86949294 86949354 -58639934 - L1MC/D LINE L1 -2242 5566 5507 233 227 23 34 chr10 86949634 86949722 -58639566 + MIR SINE MIR 82 168 -94 513 228 59 7 chr10 86950588 86950724 -58638564 + MIR SINE MIR 64 206 -56 2034 158 3 0 chr10 86950847 86951157 -58638131 - AluJb SINE Alu -1 311 1 453 36 0 0 chr10 86951937 86951992 -58637296 + (TAGA)n Simple_repeat Simple_repeat 1 55 0 2522 75 0 10 chr10 86953476 86953781 -58635507 - AluY SINE Alu -9 302 1 27 29 0 0 chr10 86953813 86953847 -58635441 + AT_rich Low_complexity Low_complexity 1 34 0 803 395 5 11 chr10 86953951 86954396 -58634892 + L1PA13 LINE L1 68 509 -6343 244 335 21 56 chr10 86954580 86954762 -58634526 + L1M2 LINE L1 779 1567 -5271 231 193 53 0 chr10 86955282 86955339 -58633949 + L1PA13 LINE L1 1547 1606 -5257 410 259 48 18 chr10 86955612 86955778 -58633510 + L1PA13 LINE L1 1436 1606 -5257 1735 117 99 7 chr10 86955780 86956063 -58633225 + MLT2A2 LTR ERVL 1 309 -144 8913 231 23 18 chr10 86956164 86958577 -58630711 + L1 LINE L1 2746 5170 -976 2412 189 19 2 chr10 86958577 86959038 -58630250 + L1PA16 LINE L1 5688 6156 -10 26 0 0 0 chr10 86959117 86959143 -58630145 + AT_rich Low_complexity Low_complexity 1 26 0 25 51 0 0 chr10 86959217 86959256 -58630032 + AT_rich Low_complexity Low_complexity 1 39 0 262 283 0 0 chr10 86960900 86960960 -58628328 - MLT1J1 LTR MaLR -146 300 241 23 54 0 0 chr10 86962300 86962337 -58626951 + AT_rich Low_complexity Low_complexity 1 37 0 180 364 0 0 chr10 86962756 86962822 -58626466 + L2 LINE L2 3206 3271 -1 344 296 0 0 chr10 86963195 86963283 -58626005 - L2 LINE L2 0 3313 3226 1922 154 0 0 chr10 86964707 86965006 -58624282 - AluJb SINE Alu -13 299 1 1594 172 46 7 chr10 86965007 86965292 -58623996 + Tigger3(Golem) DNA MER2_type 2731 3026 -3 284 308 77 0 chr10 86965348 86965504 -58623784 - MIR SINE MIR -1 261 94 2274 101 0 0 chr10 86965949 86966245 -58623043 - AluY SINE Alu -7 304 9 1636 190 0 0 chr10 86967692 86967960 -58621328 - AluJo SINE Alu -23 289 22 221 209 73 127 chr10 86968264 86968374 -58620914 + L2 LINE L2 3169 3272 0 241 178 22 0 chr10 86968450 86968495 -58620793 + Charlie8 DNA MER1_type 131 176 -2241 1525 251 163 27 chr10 86968740 86969263 -58620025 + Zaphod DNA AcHobo 1 594 -3437 377 196 101 87 chr10 86969266 86969404 -58619884 + MER33 DNA MER1_type 8 147 -177 510 149 0 0 chr10 86969831 86969918 -58619370 + (TG)n Simple_repeat Simple_repeat 2 88 0 195 42 0 0 chr10 86969968 86969992 -58619296 + (GA)n Simple_repeat Simple_repeat 1 24 0 204 214 180 11 chr10 86970597 86970686 -58618602 + L2 LINE L2 3210 3313 0 213 250 31 0 chr10 86971513 86971577 -58617711 - L2 LINE L2 -2 3270 3205 357 315 173 3 chr10 86972275 86972564 -58616724 + L2 LINE L2 2516 2853 -461 2766 191 72 25 chr10 86972722 86973359 -58615929 + LTR65 LTR ERV1 3 669 0 25 0 0 0 chr10 86974004 86974029 -58615259 + AT_rich Low_complexity Low_complexity 1 25 0 2457 60 0 38 chr10 86974030 86974349 -58614939 - AluY SINE Alu -4 307 1 1397 332 71 8 chr10 86974394 86975211 -58614077 - ERVL LTR ERVL -2089 2907 2034 233 196 36 36 chr10 86975211 86975267 -58614021 - HsTC2 DNA Tc2 -900 998 943 886 348 59 5 chr10 86975335 86975740 -58613548 - ERVL LTR ERVL -3846 1918 1492 685 95 0 0 chr10 86975918 86976013 -58613275 - L1PA7 LINE L1 -113 6041 5947 391 262 28 35 chr10 86976265 86976410 -58612878 + MIR SINE MIR 75 218 -44 194 226 57 0 chr10 86976837 86976890 -58612398 - L2 LINE L2 0 3313 3258 479 169 260 32 chr10 86977827 86977981 -58611307 - MER53 DNA DNA 0 189 1 183 217 0 0 chr10 86978354 86978414 -58610874 + A-rich Low_complexity Low_complexity 1 60 0 1361 135 5 23 chr10 86978831 86979046 -58610242 - AluJo SINE Alu -101 211 1 286 108 31 0 chr10 86979305 86979370 -58609918 + CT-rich Low_complexity Low_complexity 2 68 0 279 0 0 0 chr10 86979372 86979403 -58609885 + (CA)n Simple_repeat Simple_repeat 1 31 0 350 141 113 0 chr10 86980369 86980440 -58608848 - MER21A LTR ERV1 0 931 853 2334 159 54 10 chr10 86980440 86980848 -58608440 - MSTB LTR MaLR 0 426 1 1739 139 35 69 chr10 86980848 86981163 -58608125 - MSTB-int LTR MaLR 0 1651 1348 1603 169 35 38 chr10 86981163 86981476 -58607812 - AluJb SINE Alu 0 312 1 1739 139 35 69 chr10 86981476 86981506 -58607782 - MSTB-int LTR MaLR -303 1348 1318 1244 115 45 10 chr10 86981507 86981707 -58607581 + MSTA LTR MaLR 222 428 0 1866 190 23 8 chr10 86981707 86982247 -58607041 + MSTA-int LTR MaLR 3 598 -1050 1421 175 4 8 chr10 86982247 86982487 -58606801 + AluJb SINE Alu 1 239 -73 22 0 0 0 chr10 86982578 86982600 -58606688 + AT_rich Low_complexity Low_complexity 1 22 0 1365 124 55 0 chr10 86982620 86982822 -58606466 - MSTB LTR MaLR -213 213 1 3693 168 122 26 chr10 86982822 86983553 -58605735 - MER21B LTR ERV1 -60 803 3 334 291 0 23 chr10 86984612 86984698 -58604590 - MER117 DNA MER1_type -86 111 28 2437 160 6 60 chr10 86984847 86985359 -58603929 - MER41B LTR ERV1 -20 615 132 1743 181 0 19 chr10 86985522 86985831 -58603457 + AluJb SINE Alu 1 303 -9 1378 207 15 8 chr10 86985997 86986263 -58603025 - AluSx SINE Alu -20 292 25 34 0 0 0 chr10 86987526 86987560 -58601728 + AT_rich Low_complexity Low_complexity 1 34 0 668 268 58 0 chr10 86988318 86988508 -58600780 + MER33 DNA MER1_type 1 201 -123 23905 71 9 3 chr10 86988977 86992607 -58596681 - L1P LINE L1 -2463 3683 26 1666 147 112 0 chr10 86992917 86993230 -58596058 + MER46B DNA MER2_type 13 235 -1 205 288 68 14 chr10 86993237 86993310 -58595978 + MIR SINE MIR 157 233 -29 432 229 6 0 chr10 86994093 86994192 -58595096 - L1MC1 LINE L1 -9 6335 6228 2241 103 0 31 chr10 86995337 86995657 -58593631 - AluSx SINE Alu -2 310 1 199 325 48 0 chr10 86995659 86995742 -58593546 + L2 LINE L2 2210 2296 -1018 376 352 63 7 chr10 86996025 86996167 -58593121 + L3 LINE CR1 1377 1526 -51 416 352 71 28 chr10 86996202 86996455 -58592833 - L2 LINE L2 -1 3271 3008 1849 141 0 3 chr10 86996940 86997244 -58592044 + AluJb SINE Alu 1 303 0 641 155 74 14 chr10 86997694 86997709 -58591579 - L1MA10 LINE L1 -2 6332 6318 2494 208 133 19 chr10 86997709 86998229 -58591059 - L1ME1 LINE L1 -8 6158 5699 2214 129 0 0 chr10 86998229 86998531 -58590757 - AluSx SINE Alu -10 302 1 2494 208 133 19 chr10 86998531 86998802 -58590486 - L1ME1 LINE L1 -467 5699 5460 354 23 0 0 chr10 86998802 86998845 -58590443 + (TG)n Simple_repeat Simple_repeat 2 44 0 2494 208 133 19 chr10 86998845 86998917 -58590371 - L1ME1 LINE L1 -706 5460 5198 23 0 0 0 chr10 86998918 86998941 -58590347 + AT_rich Low_complexity Low_complexity 1 23 0 289 238 71 32 chr10 86998941 86999067 -58590221 - L1MEc LINE L1 -5762 634 504 1042 188 0 0 chr10 86999067 86999232 -58590056 - AluJb SINE Alu -15 297 133 352 175 144 0 chr10 86999276 86999373 -58589915 - FLAM_A SINE Alu -1 132 22 948 238 147 10 chr10 86999436 86999823 -58589465 - L1MEc LINE L1 -5918 478 39 200 111 22 0 chr10 87051198 87051243 -58538045 + A-rich Low_complexity Low_complexity 2 47 0 300 27 0 0 chr10 87051343 87051380 -58537908 + (CA)n Simple_repeat Simple_repeat 2 38 0 231 247 21 21 chr10 87051441 87051534 -58537754 + (TCTA)n Simple_repeat Simple_repeat 4 96 0 296 283 87 36 chr10 87051711 87051849 -58537439 + MIR SINE MIR 20 164 -98 216 0 0 0 chr10 87053391 87053415 -58535873 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 234 380 37 12 chr10 87054295 87054458 -58534830 - L2 LINE L2 0 3272 3106 1253 160 4 40 chr10 87054461 87054711 -58534577 + MER39B LTR ERV1 4 244 -409 539 267 27 135 chr10 87054697 87055105 -58534183 + MER63C DNA MER1_type 148 511 -419 * 227 289 96 0 chr10 87061942 87062046 -58527242 + MIR SINE MIR 118 231 -31 817 260 88 31 chr10 87062764 87063118 -58526170 - MLT1A2 LTR MaLR 0 374 1 280 204 23 6 chr10 87065557 87065729 -58523559 + (TG)n Simple_repeat Simple_repeat 2 176 0 283 319 0 0 chr10 87067252 87067346 -58521942 + G-rich Low_complexity Low_complexity 1 94 0 1411 201 32 45 chr10 87069338 87069712 -58519576 + MLT1A2 LTR MaLR 6 374 0 2699 222 54 81 chr10 87070253 87071760 -58517528 - L1MB8 LINE L1 -253 5925 4377 258 32 0 0 chr10 87071768 87071799 -58517489 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 885 173 0 0 chr10 87071799 87071923 -58517365 - AluSq/x SINE Alu -186 127 1 2699 222 54 81 chr10 87071923 87072506 -58516782 - L1MB8 LINE L1 -1801 4377 3780 1881 91 0 0 chr10 87072506 87072737 -58516551 - AluSg SINE Alu -18 292 62 1523 81 0 38 chr10 87074590 87074825 -58514463 - L1PA8 LINE L1 -8 6164 5939 201 293 134 0 chr10 87075702 87075784 -58513504 - L2 LINE L2 0 3272 3180 1197 106 0 0 chr10 87075821 87075972 -58513316 + AluSq/x SINE Alu 1 151 -161 741 231 15 10 chr10 87076384 87076583 -58512705 - L1MB3 LINE L1 -3 6180 5981 2205 111 0 0 chr10 87077507 87077795 -58511493 + AluSc SINE Alu 1 288 -21 417 39 0 0 chr10 87078914 87078965 -58510323 + (TG)n Simple_repeat Simple_repeat 2 52 0 47 44 0 0 chr10 87079258 87079326 -58509962 + AT_rich Low_complexity Low_complexity 1 68 0 282 212 121 0 chr10 87079869 87079935 -58509353 - MER58A DNA MER1_type -33 74 1 217 361 59 25 chr10 87080111 87080313 -58508975 - L2 LINE L2 -338 2976 2768 805 249 11 0 chr10 87081193 87081378 -58507910 + MER5A DNA MER1_type 1 187 -2 229 332 170 23 chr10 87081420 87081685 -58507603 + L3b LINE CR1 1278 1581 -2 656 179 13 7 chr10 87081757 87081908 -58507380 + L1MB3 LINE L1 6031 6182 -1 234 91 0 0 chr10 87082131 87082164 -58507124 + (T)n Simple_repeat Simple_repeat 1 33 0 187 266 31 16 chr10 87082286 87082350 -58506938 - L2 LINE L2 0 3313 3249 377 327 13 6 chr10 87083247 87083406 -58505882 + (TATG)n Simple_repeat Simple_repeat 2 161 0 * 438 326 6 11 chr10 87083316 87083497 -58505791 + (TG)n Simple_repeat Simple_repeat 1 180 0 1983 111 4 0 chr10 87084082 87084344 -58504944 + AluSp SINE Alu 47 309 -4 21 36 0 0 chr10 87084455 87084483 -58504805 + AT_rich Low_complexity Low_complexity 1 28 0 540 252 83 37 chr10 87084557 87084871 -58504417 + MLT1G1 LTR MaLR 264 554 -1 2228 108 42 31 chr10 87086213 87086573 -58502715 + THE1B LTR MaLR 1 364 0 418 363 97 24 chr10 87087759 87088128 -58501160 + L1ME1 LINE L1 5483 5824 -297 324 0 0 0 chr10 87089137 87089173 -58500115 + (CA)n Simple_repeat Simple_repeat 1 36 0 2309 84 17 17 chr10 87089730 87090029 -58499259 - AluY SINE Alu -12 299 1 21 0 0 0 chr10 87090546 87090567 -58498721 + AT_rich Low_complexity Low_complexity 1 21 0 307 303 98 93 chr10 87091188 87091637 -58497651 + L1M2 LINE L1 879 1329 -5520 1822 135 14 0 chr10 87092027 87092323 -58496965 + AluJb SINE Alu 11 310 -2 963 68 0 0 chr10 87092941 87093059 -58496229 + AluSq/x SINE Alu 1 118 -194 214 171 0 0 chr10 87093792 87093827 -58495461 + (CAT)n Simple_repeat Simple_repeat 2 36 0 211 377 40 50 chr10 87094662 87094861 -58494427 - MIR3 SINE MIR -9 199 3 3152 196 30 46 chr10 87094911 87095736 -58493552 - L1MC3 LINE L1 0 7785 6974 2274 79 0 35 chr10 87095797 87096113 -58493175 + AluSc SINE Alu 1 305 -4 38 75 0 0 chr10 87096140 87096220 -58493068 + AT_rich Low_complexity Low_complexity 1 80 0 2226 56 0 4 chr10 87096430 87096699 -58492589 - AluY SINE Alu -16 295 28 2254 86 0 0 chr10 87097101 87097379 -58491909 - AluY SINE Alu -33 278 1 5113 183 148 29 chr10 87097382 87098772 -58490516 - L1P LINE L1 -2208 3938 2384 1420 209 58 26 chr10 87098907 87099251 -58490037 - MER57B LTR ERV1 0 434 80 1019 284 115 64 chr10 87100422 87100725 -58488563 - L2 LINE L2 0 3313 3027 2382 124 5 16 chr10 87100725 87101104 -58488184 + THE1C LTR MaLR 1 375 0 1019 284 115 64 chr10 87101104 87101189 -58488099 - L2 LINE L2 -286 3027 2948 1588 217 19 27 chr10 87101189 87101557 -58487731 + MLT1A1 LTR MaLR 1 365 0 1019 284 115 64 chr10 87101557 87101959 -58487329 - L2 LINE L2 -365 2948 2476 852 314 174 11 chr10 87102003 87102554 -58486734 - L2 LINE L2 -2362 952 312 184 341 110 28 chr10 87102548 87102730 -58486558 - MIR SINE MIR -17 245 49 * 34 0 0 0 chr10 87102776 87102810 -58486478 + AT_rich Low_complexity Low_complexity 1 34 0 221 365 83 0 chr10 87102869 87102965 -58486323 + MIR SINE MIR 47 150 -112 26 30 0 0 chr10 87103119 87103152 -58486136 + AT_rich Low_complexity Low_complexity 1 33 0 342 336 34 0 chr10 87103191 87103337 -58485951 - L1ME3 LINE L1 -17 6145 5995 1143 264 65 10 chr10 87103357 87103773 -58485515 - L1ME3 LINE L1 -250 5916 5478 708 160 0 17 chr10 87103778 87103897 -58485391 - FRAM SINE Alu -19 157 41 549 280 19 4 chr10 87103898 87104193 -58485095 - L1ME3 LINE L1 -669 5493 5191 * 4288 171 60 5 chr10 87104190 87105046 -58484242 - L1MB1 LINE L1 0 6168 5266 367 258 65 32 chr10 87105143 87105267 -58484021 - L1MB1 LINE L1 -1053 5093 4966 243 206 118 176 chr10 87105413 87105549 -58483739 - MER5B DNA MER1_type -1 177 50 849 214 0 0 chr10 87105558 87105703 -58483585 - FRAM SINE Alu -30 146 2 258 270 16 0 chr10 87105704 87105767 -58483521 - MER5B DNA MER1_type -114 64 1 24 53 0 0 chr10 87107493 87107531 -58481757 + AT_rich Low_complexity Low_complexity 1 38 0 535 240 152 17 chr10 87107583 87107786 -58481502 - L1MB1 LINE L1 -1546 4600 4361 1294 195 3 50 chr10 87107786 87108089 -58481199 - AluJo SINE Alu -23 289 1 535 240 152 17 chr10 87108089 87108121 -58481167 - L1MB1 LINE L1 -1785 4361 4335 1984 251 68 59 chr10 87108122 87109004 -58480284 - L1MB1 LINE L1 -1997 4149 3254 2169 129 10 0 chr10 87109004 87109314 -58479974 - AluSq SINE Alu 0 313 1 1984 251 68 59 chr10 87109314 87109503 -58479785 - L1MB1 LINE L1 -2892 3254 3068 4245 215 17 18 chr10 87109530 87110538 -58478750 - L1MD1 LINE L1 0 6636 5630 337 257 48 38 chr10 87110522 87110627 -58478661 - L1MD1 LINE L1 -5549 991 886 * 215 238 0 0 chr10 87110836 87110878 -58478410 + T-rich Low_complexity Low_complexity 3 44 0 27 29 0 0 chr10 87111302 87111336 -58477952 + GC_rich Low_complexity Low_complexity 1 34 0 323 266 24 107 chr10 87111448 87111617 -58477671 + L1M2 LINE L1 823 977 -5872 212 0 36 0 chr10 87111893 87111921 -58477367 + (CGG)n Simple_repeat Simple_repeat 3 31 0 22 0 0 0 chr10 87113083 87113105 -58476183 + AT_rich Low_complexity Low_complexity 1 22 0 2243 86 33 3 chr10 87113307 87113611 -58475677 - AluSp SINE Alu 0 313 1 412 271 53 67 chr10 87114196 87114421 -58474867 + MIR SINE MIR 41 262 0 280 339 18 42 chr10 87114813 87114981 -58474307 - MIR SINE MIR -8 254 91 22 35 0 0 chr10 87115541 87115570 -58473718 + AT_rich Low_complexity Low_complexity 1 29 0 234 339 94 25 chr10 87116135 87116380 -58472908 + Charlie8 DNA MER1_type 4 265 -2152 225 339 79 30 chr10 87117127 87117292 -58471996 - MIR SINE MIR -4 258 86 1319 212 63 43 chr10 87117342 87117691 -58471597 - MLT1A1 LTR MaLR 0 365 10 180 111 0 0 chr10 87117821 87117848 -58471440 + (TG)n Simple_repeat Simple_repeat 2 28 0 249 108 0 0 chr10 87118377 87118414 -58470874 + (TG)n Simple_repeat Simple_repeat 1 37 0 6516 71 20 6 chr10 87118869 87119879 -58469409 + L1PA7 LINE L1 5132 6154 0 2219 113 0 0 chr10 87120923 87121255 -58468033 - AluSq SINE Alu 0 313 1 2533 49 0 3 chr10 87121802 87122110 -58467178 + AluY SINE Alu 1 307 -4 26 0 0 0 chr10 87122360 87122386 -58466902 + AT_rich Low_complexity Low_complexity 1 26 0 387 65 27 280 chr10 87123148 87123334 -58465954 - L1MA7 LINE L1 -143 6148 6010 380 256 26 51 chr10 87123530 87123647 -58465641 - MER5B DNA MER1_type -6 172 59 893 277 33 6 chr10 87123707 87124043 -58465245 - L1MCa LINE L1 -3516 3128 2784 1060 224 54 57 chr10 87124047 87124364 -58464924 - L1MCa LINE L1 -6101 543 228 180 111 0 0 chr10 87124460 87124487 -58464801 + (A)n Simple_repeat Simple_repeat 1 27 0 232 189 132 0 chr10 87124879 87124917 -58464371 + L2 LINE L2 3254 3302 -11 225 0 0 0 chr10 87124917 87124942 -58464346 + (TA)n Simple_repeat Simple_repeat 1 25 0 232 189 132 0 chr10 87124942 87124956 -58464332 + L2 LINE L2 3302 3313 0 22 56 0 0 chr10 87126070 87126106 -58463182 + AT_rich Low_complexity Low_complexity 1 36 0 614 282 17 17 chr10 87126108 87126289 -58462999 - MIR SINE MIR -24 238 58 29 0 0 0 chr10 87126356 87126385 -58462903 + AT_rich Low_complexity Low_complexity 1 29 0 25 83 0 0 chr10 87126572 87126632 -58462656 + AT_rich Low_complexity Low_complexity 1 60 0 27 49 0 0 chr10 87128457 87128498 -58460790 + AT_rich Low_complexity Low_complexity 1 41 0 900 245 149 38 chr10 87128865 87129233 -58460055 + MLT1C LTR MaLR 54 462 -5 1422 214 56 70 chr10 87129467 87129840 -58459448 + MLT1A2 LTR MaLR 1 368 -6 266 322 20 41 chr10 87130528 87130674 -58458614 + MLT1L LTR MaLR 451 593 -22 2350 56 0 30 chr10 87130733 87131037 -58458251 + AluY SINE Alu 1 295 -16 379 155 0 14 chr10 87131065 87131136 -58458152 - L1MC1 LINE L1 -10 6323 6254 343 186 37 85 chr10 87131145 87131333 -58457955 + (TA)n Simple_repeat Simple_repeat 2 180 0 1935 194 53 36 chr10 87131333 87131885 -58457403 - L1MB4 LINE L1 -2 6178 5710 235 253 69 35 chr10 87131985 87132072 -58457216 - L1MCa LINE L1 -6431 111 22 266 298 183 39 chr10 87132743 87132951 -58456337 + LTR50 LTR ERVL 53 290 -505 388 253 36 122 chr10 87132980 87133201 -58456087 + LTR50 LTR ERVL 463 664 -131 300 298 107 0 chr10 87133527 87133658 -58455630 + MIR SINE MIR 56 200 -62 223 178 0 0 chr10 87133744 87133789 -58455499 + A-rich Low_complexity Low_complexity 1 45 0 384 303 58 13 chr10 87133985 87134140 -58455148 - MER63 DNA MER1_type -273 789 2 715 296 71 26 chr10 87134430 87134741 -58454547 - MER58B DNA MER1_type -15 326 2 227 133 0 67 chr10 87134846 87134891 -58454397 - MLT2B1 LTR ERVL -13 541 500 259 259 28 19 chr10 87134900 87135008 -58454280 + (CAGAGA)n Simple_repeat Simple_repeat 4 112 0 1950 199 134 12 chr10 87135016 87135448 -58453840 - MLT2B1 LTR ERVL -35 485 1 239 164 36 0 chr10 87135512 87135567 -58453721 + CT-rich Low_complexity Low_complexity 2 58 0 24 32 0 0 chr10 87135770 87135801 -58453487 + AT_rich Low_complexity Low_complexity 1 31 0 335 342 181 11 chr10 87136079 87136339 -58452949 + L3 LINE CR1 447 750 -827 1020 247 9 0 chr10 87136533 87136752 -58452536 + MER58A DNA MER1_type 1 221 -3 321 345 51 35 chr10 87136899 87137096 -58452192 + L3 LINE CR1 1252 1451 -126 21 0 0 0 chr10 87137311 87137332 -58451956 + AT_rich Low_complexity Low_complexity 1 21 0 230 0 33 0 chr10 87137352 87137382 -58451906 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2210 97 0 0 chr10 87137384 87137663 -58451625 - AluSx SINE Alu -33 279 1 383 267 81 7 chr10 87138782 87138918 -58450370 - MIR SINE MIR -63 145 42 206 353 67 0 chr10 87139509 87139628 -58449660 + L2 LINE L2 3140 3266 -6 391 285 32 38 chr10 87141434 87141678 -58447610 - MIR SINE MIR -19 243 4 197 231 26 0 chr10 87142660 87142699 -58446589 - MIR3 SINE MIR -54 154 115 644 204 0 6 chr10 87145081 87145238 -58444050 + CT-rich Low_complexity Low_complexity 4 159 0 233 293 114 32 chr10 87145686 87145809 -58443479 + MIR3 SINE MIR 8 140 -68 821 146 0 8 chr10 87145922 87146052 -58443236 - AluJb SINE Alu -183 129 1 188 267 35 86 chr10 87146286 87146402 -58442886 + L2 LINE L2 2906 3015 -298 266 343 154 14 chr10 87147032 87147175 -58442113 + MER5A DNA MER1_type 27 189 0 1710 169 10 3 chr10 87148061 87148369 -58440919 + AluSx SINE Alu 1 310 -2 974 271 13 13 chr10 87148379 87148615 -58440673 + MIR SINE MIR 20 255 -7 242 56 28 0 chr10 87148711 87148747 -58440541 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 517 247 91 120 chr10 87150735 87150912 -58438376 - L1 LINE L1 -2801 3345 3164 1610 163 0 7 chr10 87150912 87151189 -58438099 - AluJo SINE Alu -33 279 5 517 247 91 120 chr10 87151189 87151434 -58437854 - L1 LINE L1 -2982 3164 2943 557 308 203 53 chr10 87151452 87152131 -58437157 - L1M4 LINE L1 -743 5403 4623 1929 120 0 7 chr10 87152776 87153092 -58436196 - AluSx SINE Alu 0 314 1 2317 72 0 0 chr10 87155213 87155506 -58433782 - AluY SINE Alu -18 293 1 378 265 33 60 chr10 87155652 87155803 -58433485 + MIR3 SINE MIR 26 172 -36 797 293 91 13 chr10 87156165 87156384 -58432904 - L2 LINE L2 -1022 2292 2031 1455 134 134 4 chr10 87156384 87156645 -58432643 + AluJb SINE Alu 1 295 -17 797 293 91 13 chr10 87156645 87156797 -58432491 - L2 LINE L2 -1283 2031 1892 433 255 60 34 chr10 87157599 87157748 -58431540 - MIR SINE MIR -90 172 20 319 310 133 0 chr10 87158156 87158269 -58431019 + MIR SINE MIR 20 147 -61 320 239 0 0 chr10 87158286 87158353 -58430935 + MIR SINE MIR 81 147 -61 343 263 38 0 chr10 87159692 87159825 -58429463 + (CCCCAG)n Simple_repeat Simple_repeat 3 140 0 196 127 42 42 chr10 87162231 87162275 -58427013 - MIR SINE MIR -108 154 112 944 286 159 16 chr10 87163376 87163888 -58425400 - L2 LINE L2 0 3313 2740 320 277 79 10 chr10 87165048 87165149 -58424139 + MIR SINE MIR 99 206 -56 27 0 0 0 chr10 87165285 87165312 -58423976 + AT_rich Low_complexity Low_complexity 1 27 0 2127 99 3 3 chr10 87166607 87166901 -58422387 + AluSx SINE Alu 3 296 -16 223 303 25 82 chr10 87168511 87168633 -58420655 - MIR SINE MIR -68 194 80 1477 178 52 17 chr10 87169054 87169341 -58419947 - AluJo SINE Alu -14 298 2 5312 223 32 25 chr10 87169342 87170988 -58418300 - L1PA15-16 LINE L1 -3955 2248 669 445 348 20 10 chr10 87171060 87171264 -58418024 - L1PA15-16 LINE L1 -5645 559 354 524 331 16 46 chr10 87171358 87171681 -58417607 - L1PA15-16 LINE L1 -5839 365 53 293 362 70 51 chr10 87171864 87172378 -58416910 - L1M2 LINE L1 -6314 535 12 3057 247 11 41 chr10 87172413 87173478 -58415810 - L1M2 LINE L1 -4172 2677 1645 1994 114 200 12 chr10 87173983 87174397 -58414891 + LTR14B LTR ERVK 1 608 0 389 325 8 0 chr10 87174409 87174532 -58414756 - L1M2 LINE L1 -5827 942 819 210 37 0 0 chr10 87174651 87174678 -58414610 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 45380 36 3 1 chr10 87175367 87181512 -58407776 + L1PA4 LINE L1 2 6155 0 348 284 142 37 chr10 87181512 87181730 -58407558 - L1ME4a LINE L1 -86 6035 5795 400 332 69 76 chr10 87181742 87182176 -58407112 - L1MC4a LINE L1 -1713 6095 5665 209 170 43 0 chr10 87182176 87182223 -58407065 + (TCTA)n Simple_repeat Simple_repeat 3 51 0 1595 171 13 26 chr10 87182262 87182566 -58406722 + AluJo SINE Alu 1 300 -12 592 291 85 34 chr10 87182566 87182920 -58406368 - L1MC4a LINE L1 -2170 5638 5267 1183 121 0 6 chr10 87182931 87183104 -58406184 - L1PA16 LINE L1 -226 5940 5769 7314 137 13 10 chr10 87183109 87184340 -58404948 + HERVH LTR ERV1 3850 5364 -1290 2706 75 40 12 chr10 87184344 87184746 -58404542 + HERVH LTR ERV1 7283 7695 -18 217 132 0 0 chr10 87184746 87184784 -58404504 + (T)n Simple_repeat Simple_repeat 1 38 0 8118 13 0 0 chr10 87184788 87186081 -58403207 - L1HS LINE L1 -2 6153 4861 7012 20 0 0 chr10 87186080 87186877 -58402411 + L1HS LINE L1 4064 4860 -1286 * 1777 90 112 11 chr10 87186907 87187237 -58402051 + LTR7 LTR ERV1 1 412 -38 5199 128 63 22 chr10 87187247 87188260 -58401028 - L1PA16 LINE L1 -9 6157 5257 820 152 8 0 chr10 87188262 87188394 -58400894 + AluSq/x SINE Alu 1 133 -179 1991 129 0 0 chr10 87188399 87188694 -58400594 + AluSg SINE Alu 1 295 -15 289 152 0 0 chr10 87188694 87188740 -58400548 - L1 LINE L1 -881 5265 5220 * 10450 178 24 3 chr10 87188736 87191168 -58398120 - L1M2 LINE L1 -743 6105 2134 2070 99 0 3 chr10 87191423 87191707 -58397581 + AluSg SINE Alu 1 283 -27 309 26 0 0 chr10 87191707 87191745 -58397543 + (CA)n Simple_repeat Simple_repeat 2 39 0 27 29 0 0 chr10 87193197 87193231 -58396057 + AT_rich Low_complexity Low_complexity 1 34 0 459 63 0 0 chr10 87193726 87193789 -58395499 + (TA)n Simple_repeat Simple_repeat 2 64 0 210 37 0 0 chr10 87193788 87193815 -58395473 + (CA)n Simple_repeat Simple_repeat 2 28 0 * 2038 248 48 15 chr10 87195244 87195833 -58393455 + MLT1E2 LTR MaLR 14 621 -5 1120 151 92 4 chr10 87195833 87196084 -58393204 + L1MA9 LINE L1 6040 6312 0 261 0 0 0 chr10 87196195 87196224 -58393064 + (CA)n Simple_repeat Simple_repeat 2 30 0 475 299 131 18 chr10 87196663 87196884 -58392404 - MIR SINE MIR -15 247 2 1113 325 83 32 chr10 87197088 87197966 -58391322 - L2 LINE L2 0 3313 2376 545 216 40 0 chr10 87198066 87198191 -58391097 - L1ME3A LINE L1 -45 6125 5996 517 230 86 14 chr10 87198198 87198337 -58390951 + L1ME3A LINE L1 5883 6031 -139 295 207 85 0 chr10 87198324 87198406 -58390882 - L1ME3A LINE L1 -190 5974 5886 * 713 284 140 52 chr10 87198414 87199634 -58389654 - L1M4 LINE L1 -1821 4325 2999 937 35 0 0 chr10 87199781 87199895 -58389393 - L1PA3 LINE L1 0 6155 6042 251 104 21 0 chr10 87200042 87200090 -58389198 + (TA)n Simple_repeat Simple_repeat 2 50 0 628 250 150 10 chr10 87200708 87200908 -58388380 - MIR SINE MIR -18 244 17 689 241 70 40 chr10 87204405 87204633 -58384655 - L2 LINE L2 -1119 2195 1961 642 185 92 0 chr10 87204633 87204752 -58384536 + AluJb SINE Alu 169 298 -14 536 310 126 14 chr10 87204752 87204911 -58384377 - L2 LINE L2 -1347 1967 1827 2137 54 0 0 chr10 87204911 87205171 -58384117 + AluY SINE Alu 38 297 -14 536 310 126 14 chr10 87205171 87205203 -58384085 - L2 LINE L2 -1487 1827 1800 2144 70 0 76 chr10 87205203 87205518 -58383770 + AluSg1 SINE Alu 1 291 -18 536 310 126 14 chr10 87205518 87205683 -58383605 - L2 LINE L2 -1514 1800 1570 235 357 89 6 chr10 87206758 87206915 -58382373 + MIR SINE MIR 83 252 -10 359 290 24 32 chr10 87206960 87207084 -58382204 - L2 LINE L2 -1 3312 3190 2443 60 0 3 chr10 87207885 87208185 -58381103 - AluY SINE Alu -12 299 1 1274 152 21 19 chr10 87209037 87209335 -58379953 - L1MA4 LINE L1 -1 6299 6022 2008 130 0 3 chr10 87210834 87211139 -58378149 - AluSx SINE Alu 0 304 1 1024 267 75 70 chr10 87212837 87213367 -58375921 - MLT1F1 LTR MaLR 0 567 5 1463 251 179 24 chr10 87214281 87214950 -58374338 - L2 LINE L2 -1933 1381 609 1494 128 53 53 chr10 87215428 87215609 -58373679 - AluJo SINE Alu -8 304 121 198 0 0 0 chr10 87215609 87215631 -58373657 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 1494 128 53 53 chr10 87215631 87215753 -58373535 - AluJo SINE Alu -190 122 1 218 326 56 22 chr10 87216618 87216707 -58372581 - MIR SINE MIR -93 115 24 203 310 14 14 chr10 87216879 87216950 -58372338 + L2 LINE L2 3243 3313 0 26 0 0 0 chr10 87217280 87217306 -58371982 + AT_rich Low_complexity Low_complexity 1 26 0 545 222 150 12 chr10 87217357 87217524 -58371764 - MER3 DNA MER1_type 0 209 20 503 281 145 34 chr10 87218333 87218568 -58370720 - MIR SINE MIR 0 262 2 21 0 0 0 chr10 87218588 87218609 -58370679 + AT_rich Low_complexity Low_complexity 1 21 0 180 111 0 0 chr10 87219597 87219624 -58369664 + (T)n Simple_repeat Simple_repeat 1 27 0 1594 100 0 9 chr10 87219696 87219916 -58369372 - AluY SINE Alu -11 300 83 24 32 0 0 chr10 87220721 87220752 -58368536 + AT_rich Low_complexity Low_complexity 1 31 0 414 0 0 0 chr10 87220914 87220960 -58368328 + (TA)n Simple_repeat Simple_repeat 1 46 0 323 130 14 29 chr10 87221069 87221138 -58368150 + L1P LINE L1 2325 2392 -3754 22 0 0 0 chr10 87221255 87221277 -58368011 + AT_rich Low_complexity Low_complexity 1 22 0 398 295 9 0 chr10 87221564 87221676 -58367612 + MIR SINE MIR 149 261 -1 425 383 63 23 chr10 87221829 87222132 -58367156 - MLT1K LTR MaLR -235 353 39 2090 147 0 0 chr10 87272206 87272518 -58316770 + AluSx SINE Alu 1 312 0 635 321 40 53 chr10 87272820 87273216 -58316072 - L2 LINE L2 -714 2600 2210 552 315 30 7 chr10 87273610 87273908 -58315380 + L1PA12 LINE L1 1 305 -7276 1867 166 40 0 chr10 87274827 87275153 -58314135 + L1MB2 LINE L1 5663 6001 -170 2013 117 3 7 chr10 87275181 87275472 -58313816 + AluSx SINE Alu 21 310 -2 687 187 8 52 chr10 87275713 87275847 -58313441 + FLAM_C SINE Alu 12 139 -4 844 251 47 5 chr10 87275971 87276186 -58313102 + MER58A DNA MER1_type 1 224 0 680 243 29 85 chr10 87276229 87276292 -58312996 + L1ME3A LINE L1 5904 5969 -201 2240 105 0 13 chr10 87276292 87276596 -58312692 - AluSx SINE Alu -12 300 1 680 243 29 85 chr10 87276596 87276804 -58312484 + L1ME3A LINE L1 5969 6160 -10 711 284 53 67 chr10 87276810 87277355 -58311933 + L2 LINE L2 2785 3313 0 233 312 50 28 chr10 87277400 87277541 -58311747 - L2 LINE L2 -373 2941 2798 1917 152 10 0 chr10 87277542 87277851 -58311437 + AluSx SINE Alu 1 312 0 452 215 141 96 chr10 87277914 87278226 -58311062 + MER96B DNA MER1_type? 2 327 -90 2209 231 78 7 chr10 87278231 87278772 -58310516 + L1MCa LINE L1 20 598 -5828 * 4086 202 45 65 chr10 87278768 87278932 -58310356 + L1MB7 LINE L1 4140 4306 -1878 857 161 0 29 chr10 87278932 87279069 -58310219 + FLAM_C SINE Alu 1 133 0 4086 202 45 65 chr10 87279069 87279525 -58309763 + L1MB7 LINE L1 4306 4770 -1414 2364 86 3 10 chr10 87279525 87279838 -58309450 + AluY SINE Alu 1 311 0 4086 202 45 65 chr10 87279838 87280403 -58308885 + L1MB7 LINE L1 4770 5345 -839 2001 123 3 14 chr10 87280403 87280687 -58308601 + AluSx SINE Alu 1 281 -31 4086 202 45 65 chr10 87280687 87280827 -58308461 + L1MB7 LINE L1 5345 5486 -698 707 174 99 0 chr10 87280827 87280948 -58308340 + FLAM_C SINE Alu 1 133 0 4086 202 45 65 chr10 87280948 87281186 -58308102 + L1MB7 LINE L1 5486 5727 -457 2355 90 3 3 chr10 87281186 87281487 -58307801 + AluSq SINE Alu 1 301 -12 4086 202 45 65 chr10 87281487 87281637 -58307651 + L1MB7 LINE L1 5727 5815 -369 1169 90 13 0 chr10 87281637 87281793 -58307495 + L1PA7 LINE L1 5992 6149 -5 4086 202 45 65 chr10 87281793 87281913 -58307375 + L1MB7 LINE L1 5815 5936 -248 811 201 13 0 chr10 87281914 87282063 -58307225 + AluJo SINE Alu 1 151 -161 732 193 49 90 chr10 87282066 87282289 -58306999 + L1MB7 LINE L1 5971 6184 0 2401 99 0 0 chr10 87282862 87283164 -58306124 + AluSq SINE Alu 1 302 -11 2066 122 0 0 chr10 87283164 87283443 -58305845 + AluY SINE Alu 1 279 -32 261 0 0 0 chr10 87283443 87283472 -58305816 + (TAAA)n Simple_repeat Simple_repeat 4 32 0 1289 154 19 19 chr10 87283878 87284092 -58305196 + MER46A DNA MER2_type 22 235 -1 2381 100 0 0 chr10 87284523 87284822 -58304466 + AluSq SINE Alu 1 299 -14 22 35 0 0 chr10 87285008 87285037 -58304251 + AT_rich Low_complexity Low_complexity 1 29 0 3982 209 42 76 chr10 87285192 87285247 -58304041 + L1MB2 LINE L1 3968 4023 -2148 2073 133 3 7 chr10 87285247 87285547 -58303741 + AluSg SINE Alu 1 299 -11 3982 209 42 76 chr10 87285547 87285879 -58303409 + L1MB2 LINE L1 4023 4365 -1806 2246 115 3 7 chr10 87285879 87286184 -58303104 + AluSg SINE Alu 1 304 -6 2385 92 0 13 chr10 87286184 87286497 -58302791 + AluY SINE Alu 1 310 -1 3982 209 42 76 chr10 87286497 87286814 -58302474 + L1MB2 LINE L1 4364 4690 -1481 2071 118 7 23 chr10 87286814 87287119 -58302169 + AluSx SINE Alu 1 300 -12 3982 209 42 76 chr10 87287119 87287519 -58301769 + L1MB2 LINE L1 4690 5102 -1069 1439 165 115 0 chr10 87287519 87287780 -58301508 - AluSp SINE Alu -22 291 1 3982 209 42 76 chr10 87287780 87287911 -58301377 + L1MB2 LINE L1 5102 5236 -935 878 156 0 15 chr10 87287911 87288090 -58301198 + FLAM_C SINE Alu 1 133 0 3982 209 42 76 chr10 87288090 87288314 -58300974 + L1MB2 LINE L1 5236 5466 -705 1755 175 3 3 chr10 87288314 87288600 -58300688 + AluJb SINE Alu 3 288 -24 3982 209 42 76 chr10 87288600 87289322 -58299966 + L1MB2 LINE L1 5466 6013 -158 520 202 101 0 chr10 87289332 87289441 -58299847 + MLT1B LTR MaLR 2 121 -269 2268 105 7 3 chr10 87289449 87289754 -58299534 + AluSx SINE Alu 1 306 -6 425 170 60 0 chr10 87289763 87289863 -58299425 + L1MB2 LINE L1 6064 6169 -2 472 98 0 0 chr10 87290745 87290806 -58298482 - Alu SINE Alu -247 62 2 1315 152 102 53 chr10 87290808 87290847 -58298441 + LTR49 LTR ERV1 204 240 -355 1696 193 0 10 chr10 87290847 87291147 -58298141 + AluJb SINE Alu 2 298 -14 1315 152 102 53 chr10 87291147 87291409 -58297879 + LTR49 LTR ERV1 240 520 -75 1714 119 42 4 chr10 87291409 87291670 -58297618 + MER41B LTR ERV1 1 271 -364 206 81 27 0 chr10 87291678 87291715 -58297573 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 1309 114 5 5 chr10 87291721 87291905 -58297383 - AluSg/x SINE Alu -20 292 109 1178 104 6 29 chr10 87291907 87292145 -58297143 + AluSq SINE Alu 145 378 0 251 114 0 0 chr10 87292149 87292184 -58297104 + MER4E LTR ERV1 745 779 0 704 58 0 0 chr10 87292497 87292583 -58296705 + LTR8A LTR ERV1 1 86 -641 944 173 0 0 chr10 87292600 87292750 -58296538 - AluJb SINE Alu -26 286 137 3631 116 74 24 chr10 87292750 87293372 -58295916 + LTR8A LTR ERV1 73 725 -2 1643 184 0 45 chr10 87293674 87293820 -58295468 + AluJo SINE Alu 1 127 -185 2157 110 7 0 chr10 87293820 87294110 -58295178 + AluSx SINE Alu 6 297 -15 1643 184 0 45 chr10 87294110 87294273 -58295015 + AluJo SINE Alu 127 296 -16 2254 108 0 0 chr10 87294958 87295253 -58294035 - AluSx SINE Alu -17 295 1 569 110 12 0 chr10 87295461 87295543 -58293745 - AluS SINE Alu -228 84 2 571 256 95 31 chr10 87295905 87296195 -58293093 + MLT2C1 LTR ERVL 17 393 -4 270 266 26 104 chr10 87296200 87296310 -58292978 + ERVL-C1 LTR ERVL 2 98 -5666 2096 107 14 3 chr10 87296310 87296601 -58292687 + AluSg SINE Alu 1 294 -16 270 266 26 104 chr10 87296601 87296644 -58292644 + ERVL-C1 LTR ERVL 98 143 -5621 1704 222 23 11 chr10 87296706 87297058 -58292230 + ERVL LTR ERVL 4267 4622 -1142 1631 117 144 0 chr10 87297058 87297315 -58291973 - AluSx SINE Alu -18 294 1 504 233 133 57 chr10 87297352 87297562 -58291726 + MLT2C1 LTR ERVL 172 397 0 2100 141 16 0 chr10 87297684 87297989 -58291299 + AluSg SINE Alu 1 310 0 2294 100 0 3 chr10 87298275 87298586 -58290702 + AluY SINE Alu 1 310 -1 587 371 22 25 chr10 87298745 87299192 -58290096 + L1PA13 LINE L1 1 446 -6341 2141 125 3 0 chr10 87300000 87300304 -58288984 + AluSp SINE Alu 1 305 -8 2887 170 11 30 chr10 87300305 87300876 -58288412 + L1PA16 LINE L1 5607 6166 0 410 192 26 0 chr10 87302263 87302341 -58286947 + AluJ/FLAM SINE Alu 1 80 -222 306 114 68 0 chr10 87302347 87302435 -58286853 + (TA)n Simple_repeat Simple_repeat 1 94 0 1144 71 0 0 chr10 87302436 87302576 -58286712 + AluSg/x SINE Alu 159 298 -14 561 38 6 126 chr10 87302577 87302736 -58286552 + (TA)n Simple_repeat Simple_repeat 1 140 0 2284 106 0 0 chr10 87303073 87303374 -58285914 + AluSx SINE Alu 1 301 -11 284 232 0 0 chr10 87303461 87303530 -58285758 + A-rich Low_complexity Low_complexity 1 69 0 1279 186 14 0 chr10 87303720 87303941 -58285347 + AluJo SINE Alu 5 228 -84 1254 173 101 75 chr10 87304009 87304367 -58284921 - MSTC LTR MaLR -61 367 1 1910 130 0 7 chr10 87304628 87304898 -58284390 - AluSx SINE Alu -10 302 35 1879 178 0 9 chr10 87305463 87305778 -58283510 - AluSx SINE Alu 0 312 1 471 297 67 6 chr10 87305825 87305990 -58283298 - MER101 LTR ERV1 -67 407 233 234 336 53 46 chr10 87305986 87306269 -58283019 - MER101B LTR ERV1 -280 290 6 * 657 158 65 43 chr10 87306469 87306608 -58282680 + LTR8 LTR ERV1 1 142 -549 449 140 54 32 chr10 87306608 87306722 -58282566 - AluSg/x SINE Alu 0 309 205 2109 116 3 19 chr10 87307219 87307529 -58281759 + AluSp SINE Alu 1 305 -8 2867 178 5 30 chr10 87307530 87308104 -58281184 + L1PA16 LINE L1 5607 6166 0 420 209 25 4 chr10 87309474 87309572 -58279716 + AluJ/FLAM SINE Alu 1 80 -222 742 94 47 0 chr10 87309575 87309745 -58279543 + (TA)n Simple_repeat Simple_repeat 2 179 0 919 146 0 0 chr10 87309753 87309890 -58279398 + AluSg/x SINE Alu 157 293 -17 180 184 0 0 chr10 87309977 87310026 -58279262 + A-rich Low_complexity Low_complexity 1 49 0 1294 181 14 0 chr10 87310237 87310458 -58278830 + AluJo SINE Alu 5 228 -84 1220 176 100 78 chr10 87310525 87310884 -58278404 - MSTC LTR MaLR -61 367 1 2022 152 0 0 chr10 87311150 87311452 -58277836 - AluSx SINE Alu -10 302 1 467 122 24 12 chr10 87311656 87311738 -58277550 - AluS SINE Alu -228 84 2 483 313 0 0 chr10 87312100 87312250 -58277038 + MLT2C2 LTR ERVL 17 166 -298 398 201 194 58 chr10 87312255 87312394 -58276894 + MLT2C1 LTR ERVL 240 397 0 2066 123 10 3 chr10 87312505 87312807 -58276481 + AluSg SINE Alu 1 304 -6 1699 230 23 0 chr10 87312912 87313260 -58276028 + ERVL LTR ERVL 4267 4622 -1142 2070 128 14 0 chr10 87313260 87313557 -58275731 - AluSx SINE Alu -11 301 1 430 225 143 62 chr10 87313594 87313803 -58275485 + MLT2C1 LTR ERVL 172 397 0 1903 161 16 0 chr10 87313925 87314230 -58275058 + AluSx SINE Alu 1 310 -2 569 371 25 27 chr10 87314615 87315062 -58274226 + L1PA13 LINE L1 1 446 -6341 1931 158 3 0 chr10 87315872 87316182 -58273106 + AluSp SINE Alu 3 313 0 2938 171 5 30 chr10 87316183 87316757 -58272531 + L1PA16 LINE L1 5607 6166 0 365 218 26 0 chr10 87318140 87318218 -58271070 + AluJ/FLAM SINE Alu 1 80 -222 38 0 0 0 chr10 87318221 87318259 -58271029 + AT_rich Low_complexity Low_complexity 1 38 0 947 145 0 0 chr10 87318259 87318400 -58270888 + AluSg/x SINE Alu 157 300 -10 603 74 0 0 chr10 87318400 87318481 -58270807 + (TATATG)n Simple_repeat Simple_repeat 3 83 0 2207 125 0 0 chr10 87318827 87319131 -58270157 + AluSx SINE Alu 1 304 -8 240 273 0 0 chr10 87319218 87319295 -58269993 + A-rich Low_complexity Low_complexity 1 77 0 1389 176 9 0 chr10 87319485 87319707 -58269581 + AluJo SINE Alu 5 228 -84 1035 199 101 76 chr10 87319768 87320124 -58269164 - MSTC LTR MaLR -61 367 3 1959 122 0 7 chr10 87320390 87320668 -58268620 - AluSx SINE Alu -2 310 35 1889 174 0 0 chr10 87321227 87321526 -58267762 - AluSx SINE Alu -13 299 1 506 330 5 5 chr10 87321556 87321747 -58267541 - MER101 LTR ERV1 -51 423 233 264 346 49 34 chr10 87321743 87322006 -58267282 - MER101B LTR ERV1 -280 290 24 * 658 146 66 44 chr10 87322216 87322353 -58266935 + LTR8 LTR ERV1 1 140 -551 2239 96 17 0 chr10 87322376 87322669 -58266619 - AluSg SINE Alu -12 298 1 223 255 0 0 chr10 87323444 87323491 -58265797 + GA-rich Low_complexity Low_complexity 3 49 0 1977 93 0 41 chr10 87324412 87324702 -58264586 - AluY SINE Alu -2 309 32 2048 136 3 13 chr10 87326548 87326849 -58262439 + AluSg SINE Alu 1 298 -12 2039 134 0 0 chr10 87327227 87327540 -58261748 + AluSx SINE Alu 1 313 0 1581 173 34 20 chr10 87328034 87328329 -58260959 + AluJb SINE Alu 3 301 -11 2241 113 3 0 chr10 87328441 87328741 -58260547 - AluSx SINE Alu -11 301 1 710 267 78 54 chr10 87329124 87329489 -58259799 + L2 LINE L2 2247 2625 -689 2250 118 0 0 chr10 87329489 87329785 -58259503 - AluSx SINE Alu -16 296 1 710 267 78 54 chr10 87329785 87329842 -58259446 + L2 LINE L2 2625 2679 -635 2017 129 20 0 chr10 87329907 87330202 -58259086 - AluSx SINE Alu -11 301 1 624 226 8 8 chr10 87330673 87330797 -58258491 + FLAM_A SINE Alu 1 124 -9 512 181 21 0 chr10 87330980 87331074 -58258214 + FRAM SINE Alu 75 170 -6 1070 151 0 24 chr10 87331079 87331245 -58258043 + AluJb SINE Alu 129 290 -22 1051 224 23 33 chr10 87331253 87331557 -58257731 + L1M3 LINE L1 4496 4796 -1350 1711 175 65 70 chr10 87331592 87331783 -58257505 + L1M3 LINE L1 4765 4956 -1227 2352 80 3 3 chr10 87331783 87332084 -58257204 + AluY SINE Alu 1 301 -10 1711 175 65 70 chr10 87332084 87332384 -58256904 + L1M3 LINE L1 4956 5256 -927 2388 104 3 0 chr10 87332384 87332692 -58256596 + AluSx SINE Alu 1 309 -3 1711 175 65 70 chr10 87332692 87332838 -58256450 + L1M3 LINE L1 5256 5725 -458 210 246 46 0 chr10 87332985 87333050 -58256238 + MIR SINE MIR 10 77 -185 407 268 103 10 chr10 87333616 87333810 -58255478 - L1MC5 LINE L1 -55 7906 7695 1755 148 20 14 chr10 87333955 87334252 -58255036 + AluJo SINE Alu 1 299 -13 250 297 44 0 chr10 87334580 87334671 -58254617 - MIR SINE MIR -65 197 103 214 269 90 0 chr10 87334914 87334992 -58254296 - MIR SINE MIR -60 202 118 280 278 139 33 chr10 87335185 87335336 -58253952 - MIR SINE MIR -13 249 83 180 0 0 0 chr10 87335481 87335501 -58253787 + (CAA)n Simple_repeat Simple_repeat 1 20 0 1887 124 7 7 chr10 87335781 87336072 -58253216 - AluSx SINE Alu -17 295 5 1844 92 12 12 chr10 87336376 87336627 -58252661 - AluSx SINE Alu -46 266 16 2394 80 6 13 chr10 87336643 87336956 -58252332 - AluY SINE Alu 0 311 1 2463 46 0 0 chr10 87337155 87337462 -58251826 + AluY SINE Alu 1 307 0 2016 134 7 10 chr10 87337565 87337855 -58251433 + AluSx SINE Alu 1 289 -23 35 0 0 0 chr10 87337855 87337890 -58251398 + AT_rich Low_complexity Low_complexity 1 35 0 1847 159 7 3 chr10 87338680 87338970 -58250318 + AluSx SINE Alu 1 291 -21 272 27 27 0 chr10 87339015 87339052 -58250236 + (TA)n Simple_repeat Simple_repeat 2 39 0 1964 162 42 85 chr10 87339387 87339573 -58249715 - MER4D LTR ERV1 -5 898 706 2091 143 3 0 chr10 87339573 87339881 -58249407 + AluSx SINE Alu 1 309 -3 1964 162 42 85 chr10 87339881 87340335 -58248953 - MER4D LTR ERV1 -197 706 1 11096 114 39 25 chr10 87340335 87340497 -58248791 - MER4D-int LTR ERV1 0 6758 6600 2335 104 3 0 chr10 87340497 87340796 -58248492 + AluSp SINE Alu 1 300 -13 11096 114 39 25 chr10 87340796 87341183 -58248105 - MER4D-int LTR ERV1 -158 6600 6220 1420 124 177 12 chr10 87341183 87341432 -58247856 + AluSc SINE Alu 1 290 -9 11096 114 39 25 chr10 87341432 87342187 -58247101 - MER4D-int LTR ERV1 -538 6220 5477 2317 99 3 13 chr10 87342187 87342490 -58246798 + AluSg SINE Alu 1 300 -10 11096 114 39 25 chr10 87342490 87342655 -58246633 - MER4D-int LTR ERV1 -1281 5477 5316 1646 148 50 37 chr10 87342655 87342781 -58246507 + AluJb SINE Alu 1 124 -188 2053 124 3 3 chr10 87342781 87343071 -58246217 + AluSq SINE Alu 6 295 -18 1646 148 50 37 chr10 87343071 87343242 -58246046 + AluJb SINE Alu 124 302 -10 11096 114 39 25 chr10 87343242 87343550 -58245738 - MER4D-int LTR ERV1 -1442 5316 4953 1193 124 110 53 chr10 87343551 87343608 -58245680 + AluSx SINE Alu 56 108 -204 1588 126 130 11 chr10 87343608 87343869 -58245419 + AluSg1 SINE Alu 1 292 -17 1193 124 110 53 chr10 87343869 87344020 -58245268 + AluSx SINE Alu 108 276 -36 243 0 0 0 chr10 87344026 87344053 -58245235 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1706 114 0 0 chr10 87344055 87344282 -58245006 - MER4D-int LTR ERV1 -1792 4966 4740 1647 70 107 37 chr10 87344281 87344579 -58244709 - MER4B-int LTR ERV1 -4115 2643 2325 * 218 125 21 0 chr10 87344610 87344658 -58244630 + (TTTA)n Simple_repeat Simple_repeat 4 52 0 419 98 0 0 chr10 87344661 87344738 -58244550 + MER4B-int LTR ERV1 1550 2468 -4130 4532 124 76 7 chr10 87344751 87345462 -58243826 + MER4E LTR ERV1 20 779 0 4933 91 29 59 chr10 87345462 87345850 -58243438 - MER4B-int LTR ERV1 -4439 2319 1921 2272 114 0 10 chr10 87345850 87346158 -58243130 - AluSg1 SINE Alu -1 308 4 4933 91 29 59 chr10 87346158 87346681 -58242607 - MER4B-int LTR ERV1 -4837 1921 1436 1936 204 83 24 chr10 87346205 87346744 -58242544 - LTR57-int LTR ERVL -3763 1580 1010 * 1037 226 106 127 chr10 87346745 87347562 -58241726 + LTR1B LTR ERV1 28 826 0 2252 109 57 14 chr10 87347562 87347983 -58241305 - MER4B-int LTR ERV1 -4412 2186 1748 180 111 0 0 chr10 87347992 87348019 -58241269 + (CA)n Simple_repeat Simple_repeat 2 28 0 1263 109 48 53 chr10 87348019 87348118 -58241170 - MER4B-int LTR ERV1 -2467 1818 1720 2148 125 3 0 chr10 87348118 87348413 -58240875 + AluSx SINE Alu 1 296 -16 1263 109 48 53 chr10 87348413 87348565 -58240723 - MER4B-int LTR ERV1 -2565 1720 794 3195 137 23 19 chr10 87348565 87349083 -58240205 - MER4B-int LTR ERV1 -5911 847 328 2423 87 3 0 chr10 87349138 87349448 -58239840 - AluY SINE Alu 0 311 1 1948 177 0 0 chr10 87349514 87349825 -58239463 - AluSx SINE Alu -1 311 1 1538 158 109 48 chr10 87349825 87350155 -58239133 - MER4B LTR ERV1 -260 350 1 2348 81 0 0 chr10 87350212 87350526 -58238762 - AluSc SINE Alu 0 314 1 1187 149 72 29 chr10 87350723 87350839 -58238449 + AluJo SINE Alu 4 134 -178 381 22 0 0 chr10 87350839 87350885 -58238403 + (TAA)n Simple_repeat Simple_repeat 1 46 0 1187 149 72 29 chr10 87350885 87350976 -58238312 + AluJo SINE Alu 134 220 -92 253 80 20 80 chr10 87350979 87351029 -58238259 + AluJo SINE Alu 90 136 -166 258 281 30 72 chr10 87351440 87351675 -58237613 - L1M4 LINE L1 -1198 4948 4724 356 307 115 25 chr10 87351811 87352055 -58237233 - L1M4 LINE L1 -891 5255 4990 699 152 0 18 chr10 87352357 87352469 -58236819 + FLAM_C SINE Alu 23 132 -11 2082 145 0 3 chr10 87352716 87353013 -58236275 + AluSx SINE Alu 1 296 -16 2258 91 40 0 chr10 87353314 87353611 -58235677 + AluSq SINE Alu 1 309 -4 504 252 84 0 chr10 87354141 87354296 -58234992 + MIR SINE MIR 90 257 -5 1926 127 24 3 chr10 87354308 87354599 -58234689 - AluSg SINE Alu -13 297 1 722 262 40 20 chr10 87354774 87355026 -58234262 - MIR SINE MIR -1 261 5 1842 126 7 4 chr10 87355121 87355392 -58233896 - AluSx SINE Alu -14 298 27 198 0 0 0 chr10 87355404 87355426 -58233862 + (TTCA)n Simple_repeat Simple_repeat 2 23 0 690 171 0 0 chr10 87355426 87355537 -58233751 - FLAM_C SINE Alu -27 116 6 1265 122 117 5 chr10 87356821 87357034 -58232254 - AluSx SINE Alu -16 296 60 1765 145 6 43 chr10 87357761 87357902 -58231386 + AluJb SINE Alu 1 146 -166 2078 125 0 0 chr10 87357902 87358208 -58231080 + AluSx SINE Alu 1 306 0 1765 145 6 43 chr10 87358208 87358388 -58230900 + AluJb SINE Alu 146 312 0 1708 166 23 20 chr10 87358491 87358793 -58230495 + AluJo SINE Alu 3 305 -7 229 266 16 0 chr10 87359428 87359492 -58229796 + L2 LINE L2 3204 3268 -4 382 306 12 23 chr10 87359654 87359827 -58229461 - MER5B DNA MER1_type -3 175 5 2123 120 10 7 chr10 87360210 87360510 -58228778 - AluSx SINE Alu -11 301 1 2056 140 0 34 chr10 87360899 87361221 -58228067 + AluSx SINE Alu 1 311 -1 2359 92 13 0 chr10 87361919 87362224 -58227064 - AluSc SINE Alu 0 309 1 2192 119 0 22 chr10 87362386 87362698 -58226590 + AluSx SINE Alu 5 309 -3 2364 78 3 3 chr10 87363665 87363961 -58225327 + AluSg SINE Alu 1 296 -14 723 177 23 0 chr10 87364073 87364203 -58225085 - FLAM_A SINE Alu 0 133 1 729 253 33 65 chr10 87364252 87364465 -58224823 - L1ME LINE L1 -305 5816 5616 2104 116 0 33 chr10 87364465 87364766 -58224522 + AluSx SINE Alu 1 291 -21 729 253 33 65 chr10 87364766 87364888 -58224400 - L1ME LINE L1 -505 5616 5492 469 245 141 98 chr10 87365077 87365743 -58223545 - L1ME LINE L1 -1085 5061 4367 1006 55 0 24 chr10 87365761 87365888 -58223400 + AluY SINE Alu 174 297 -14 730 159 0 0 chr10 87365888 87366001 -58223287 - AluJo/FLAM SINE Alu -198 114 2 477 148 0 0 chr10 87366005 87366093 -58223195 - AluS SINE Alu -1 308 221 1133 213 81 103 chr10 87366097 87366503 -58222785 - L1ME LINE L1 -1776 4370 3957 1698 158 0 25 chr10 87366503 87366782 -58222506 + AluJo SINE Alu 11 282 -30 1133 213 81 103 chr10 87366782 87366826 -58222462 - L1ME LINE L1 -2189 3957 3914 2552 59 0 7 chr10 87366826 87367130 -58222158 + AluY SINE Alu 1 302 -9 1133 213 81 103 chr10 87367130 87367227 -58222061 - L1ME LINE L1 -2232 3914 3831 506 315 60 5 chr10 87367385 87367601 -58221687 - MIR SINE MIR -28 234 7 24 0 0 0 chr10 87367808 87367832 -58221456 + AT_rich Low_complexity Low_complexity 1 24 0 190 226 81 32 chr10 87368797 87368859 -58220429 + L2 LINE L2 3206 3270 -2 1634 161 23 75 chr10 87370006 87370257 -58219031 - MER7A DNA MER2_type -2697 341 79 378 0 0 0 chr10 87370257 87370299 -58218989 + (TA)n Simple_repeat Simple_repeat 2 43 0 1897 115 0 26 chr10 87370299 87370568 -58218720 + AluSx SINE Alu 38 299 -13 1634 161 23 75 chr10 87370568 87370663 -58218625 - MER7A DNA MER2_type -2957 81 14 2447 66 0 0 chr10 87370664 87370950 -58218338 + AluY SINE Alu 1 286 -25 221 162 0 0 chr10 87371077 87371114 -58218174 - MIR SINE MIR -90 118 82 189 154 0 0 chr10 87371375 87371414 -58217874 + A-rich Low_complexity Low_complexity 1 39 0 22 0 0 0 chr10 87372426 87372448 -58216840 + AT_rich Low_complexity Low_complexity 1 22 0 2180 123 0 0 chr10 87372457 87372750 -58216538 - AluSx SINE Alu -19 293 1 13788 82 6 1 chr10 87373018 87374886 -58214402 - L1PA7 LINE L1 -1039 5107 3230 7260 53 8 0 chr10 87374886 87375917 -58213371 + L1PA7 LINE L1 5117 6154 0 2121 165 10 7 chr10 87375925 87376330 -58212958 + L1 LINE L1 4250 4655 -1491 1454 108 0 0 chr10 87376330 87376516 -58212772 + AluSx SINE Alu 34 219 -93 649 182 14 7 chr10 87376520 87376668 -58212620 + GA-rich Low_complexity Low_complexity 2 150 0 288 178 133 44 chr10 87376800 87376890 -58212398 - MER5A DNA MER1_type -83 106 9 1615 176 30 7 chr10 87377314 87377609 -58211679 + AluJb SINE Alu 1 302 -10 2499 48 0 7 chr10 87377672 87377965 -58211323 + AluY SINE Alu 1 291 -20 339 323 75 82 chr10 87378679 87379143 -58210145 + HAL1 LINE L1 977 1437 -1070 1670 172 3 21 chr10 87379166 87379301 -58209987 + AluJb SINE Alu 1 137 -175 2236 94 3 7 chr10 87379301 87379598 -58209690 + AluSc SINE Alu 1 296 -13 1670 172 3 21 chr10 87379598 87379753 -58209535 + AluJb SINE Alu 137 286 -26 255 306 90 0 chr10 87379772 87379883 -58209405 + HAL1 LINE L1 1424 1544 -963 180 0 0 0 chr10 87379947 87379967 -58209321 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 2129 128 0 0 chr10 87379970 87380259 -58209029 - AluSx SINE Alu -23 289 1 2227 124 0 3 chr10 87380641 87380947 -58208341 - AluSx SINE Alu -7 305 1 377 314 21 43 chr10 87382100 87382236 -58207052 - MIR SINE MIR -8 254 121 1736 132 97 0 chr10 87382236 87382516 -58206772 + AluSx SINE Alu 1 305 0 377 314 21 43 chr10 87382516 87382566 -58206722 - MIR SINE MIR -141 121 71 198 0 0 0 chr10 87382567 87382589 -58206699 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 12336 70 4 1 chr10 87382726 87384258 -58205030 + HERVK14 LTR ERVK 17 1553 -4392 465 48 0 0 chr10 87384275 87384337 -58204951 + HERVK14 LTR ERVK 3317 3378 -2567 4678 84 16 43 chr10 87384337 87385065 -58204223 + HERVK14 LTR ERVK 4944 5572 -373 1313 178 0 5 chr10 87385067 87385098 -58204190 + MER41C-int LTR ERV1 7545 7756 0 1480 77 0 0 chr10 87385098 87385280 -58204008 + HERVK14 LTR ERVK 5578 5759 -186 377 168 0 18 chr10 87385280 87385355 -58203933 + MER41C LTR ERV1 1 61 -493 473 15 30 61 chr10 87385355 87385421 -58203867 + HERVK14 LTR ERVK 5835 5898 -47 843 285 36 36 chr10 87385445 87385775 -58203513 + HERVK14 LTR ERVK 6912 7241 -2 2064 72 5 176 chr10 87385780 87386195 -58203093 + LTR14A LTR ERVK 1 344 0 832 98 219 0 chr10 87386197 87386320 -58202968 - AluSg SINE Alu -160 150 1 241 279 196 76 chr10 87386454 87386527 -58202761 + MIR3 SINE MIR 21 84 -124 1912 146 3 10 chr10 87386527 87386822 -58202466 - AluSx SINE Alu -19 293 1 241 279 196 76 chr10 87386822 87386906 -58202382 + MIR3 SINE MIR 84 197 -11 390 278 0 19 chr10 87386942 87387050 -58202238 + L3 LINE CR1 1419 1524 -53 332 288 84 23 chr10 87387075 87387290 -58201998 - MIR SINE MIR 0 262 35 301 273 83 8 chr10 87387533 87387654 -58201634 - MIR SINE MIR -55 153 24 186 43 0 0 chr10 87387751 87387774 -58201514 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 2296 85 7 0 chr10 87387778 87388061 -58201227 - AluSp SINE Alu -27 286 2 1936 133 6 38 chr10 87388531 87388709 -58200579 - AluSx SINE Alu -7 305 140 2580 56 3 0 chr10 87388709 87389011 -58200277 - AluY SINE Alu -8 303 1 1936 133 6 38 chr10 87389011 87389147 -58200141 - AluSx SINE Alu -172 140 1 456 130 0 0 chr10 87389833 87389910 -58199378 - AluSp/q SINE Alu 0 313 237 1424 152 104 60 chr10 87390554 87390889 -58198399 - MER4B LTR ERV1 -260 350 1 2192 119 0 22 chr10 87391339 87391651 -58197637 + AluSx SINE Alu 5 309 -3 2186 95 10 3 chr10 87392618 87392912 -58196376 + AluSg SINE Alu 1 296 -14 722 262 40 20 chr10 87393007 87393259 -58196029 + MIR SINE MIR 5 261 -1 1926 127 24 3 chr10 87393434 87393725 -58195563 + AluSg SINE Alu 1 297 -13 504 252 84 0 chr10 87393737 87393892 -58195396 - MIR SINE MIR -5 257 90 2250 91 40 0 chr10 87394423 87394719 -58194569 - AluSq SINE Alu -5 308 1 2082 145 0 3 chr10 87395020 87395317 -58193971 - AluSx SINE Alu -16 296 1 699 152 0 18 chr10 87395564 87395676 -58193612 - FLAM_C SINE Alu -11 132 23 210 220 0 0 chr10 87396873 87396932 -58192356 + A-rich Low_complexity Low_complexity 1 59 0 978 182 62 3 chr10 87397250 87397538 -58191750 + L1MC3 LINE L1 7178 7515 -270 443 173 115 0 chr10 87397546 87397650 -58191638 + L1MC3 LINE L1 7669 7784 -1 791 145 0 22 chr10 87397706 87397844 -58191444 + FLAM_C SINE Alu 9 143 0 384 258 67 46 chr10 87397977 87398171 -58191117 - L1MC4a LINE L1 -1909 5899 5702 2284 79 7 0 chr10 87398179 87398484 -58190804 - AluSx SINE Alu -5 307 1 206 259 17 0 chr10 87399242 87399300 -58189988 - L2 LINE L2 -9 3263 3205 237 315 148 9 chr10 87399391 87399499 -58189789 + MIR SINE MIR 20 142 -66 21 0 0 0 chr10 87399652 87399673 -58189615 + AT_rich Low_complexity Low_complexity 1 21 0 261 158 0 0 chr10 87399678 87399716 -58189572 - Alu SINE Alu -263 38 1 315 267 17 61 chr10 87399719 87399837 -58189451 - L1M4 LINE L1 -3106 3040 2931 2015 124 0 0 chr10 87399837 87400135 -58189153 - AluSx SINE Alu -14 298 1 315 267 17 61 chr10 87400135 87400196 -58189092 - L1M4 LINE L1 -3215 2931 2869 22 0 0 0 chr10 87400226 87400248 -58189040 + AT_rich Low_complexity Low_complexity 1 22 0 787 131 16 0 chr10 87400259 87400381 -58188907 + FLAM_C SINE Alu 5 128 -5 444 301 83 69 chr10 87400452 87400748 -58188540 - L1M4 LINE L1 -3380 2766 2476 935 186 23 12 chr10 87400748 87400920 -58188368 - FAM SINE Alu -1 174 1 444 301 83 69 chr10 87400920 87401228 -58188060 - L1M4 LINE L1 -3670 2476 2110 211 293 86 35 chr10 87401585 87401701 -58187587 + L2 LINE L2 2268 2389 -925 630 206 113 21 chr10 87401813 87401954 -58187334 + MER69 DNA AcHobo 2 155 -1071 1792 183 0 0 chr10 87401957 87402257 -58187031 - MER7A DNA MER2_type 0 346 49 2035 267 143 8 chr10 87402438 87403090 -58186198 + MER69 DNA AcHobo 159 898 -1628 215 374 29 7 chr10 87403144 87403283 -58186005 + L2 LINE L2 2918 3059 -213 637 205 39 130 chr10 87404042 87404296 -58184992 - MIR SINE MIR 0 262 32 345 277 64 52 chr10 87404449 87404716 -58184572 + L1MEd LINE L1 919 1188 -4931 * 459 325 93 45 chr10 87404693 87405253 -58184035 + HAL1 LINE L1 -16 570 -1920 434 147 0 0 chr10 87405528 87405596 -58183692 + MER81 DNA DNA 2 69 -45 2335 133 72 37 chr10 87405597 87406025 -58183263 + MSTB2 LTR MaLR 15 457 0 256 250 0 0 chr10 87406025 87406077 -58183211 + MER81 DNA DNA 63 114 0 659 96 19 0 chr10 87407063 87407167 -58182121 + (TTTC)n Simple_repeat Simple_repeat 1 106 0 224 26 0 79 chr10 87408284 87408322 -58180966 + (TTAGGG)n Simple_repeat Simple_repeat 6 40 0 446 302 116 39 chr10 87408529 87408756 -58180532 + MIR SINE MIR 2 246 -16 424 347 12 12 chr10 87408756 87408923 -58180365 + MIR SINE MIR 3 169 -93 428 237 128 83 chr10 87409220 87409474 -58179814 - LTR41 LTR ERVL 0 795 510 742 197 48 21 chr10 87409732 87409920 -58179368 - LTR41 LTR ERVL -580 193 1 5130 85 28 0 chr10 87410432 87411104 -58178184 + LTR8 LTR ERV1 1 691 0 2184 118 0 0 chr10 87411305 87411618 -58177670 - AluSq SINE Alu 0 313 1 2012 104 29 29 chr10 87411618 87411649 -58177639 - AluSx SINE Alu -3 309 279 594 103 0 0 chr10 87411649 87411736 -58177552 + (TACTG)n Simple_repeat Simple_repeat 4 90 0 2012 104 29 29 chr10 87411736 87412012 -58177276 - AluSx SINE Alu -32 280 2 402 354 9 42 chr10 87412202 87412417 -58176871 + L2 LINE L2 36 243 -3071 * 509 258 118 38 chr10 87412403 87412589 -58176699 + L2 LINE L2 3112 3312 -1 432 256 199 26 chr10 87412739 87412930 -58176358 + MIR SINE MIR 28 251 -11 413 191 45 126 chr10 87412968 87413167 -58176121 + MER117 DNA MER1_type 12 194 -3 2170 100 0 3 chr10 87413648 87413949 -58175339 + AluSx SINE Alu 1 300 -12 21 0 0 0 chr10 87414254 87414275 -58175013 + AT_rich Low_complexity Low_complexity 1 21 0 7881 24 0 0 chr10 87414275 87415955 -58173333 - L1PA3 LINE L1 0 6155 4476 190 259 0 52 chr10 87416000 87416058 -58173230 - L2 LINE L2 -18 3254 3200 265 243 243 37 chr10 87416080 87416216 -58173072 + MIR3 SINE MIR 12 175 -33 430 279 60 86 chr10 87416558 87416659 -58172629 - L1ME LINE L1 -395 5775 5673 1230 67 11 6 chr10 87416659 87416838 -58172450 + (TTC)n Simple_repeat Simple_repeat 1 180 0 1547 172 0 53 chr10 87416841 87417144 -58172144 - AluJb SINE Alu -14 298 12 430 279 60 86 chr10 87417144 87417307 -58171981 - L1ME LINE L1 -499 5671 5514 3877 123 56 50 chr10 87417309 87417861 -58171427 + MER50 LTR ERV1 10 569 -165 1865 116 3 31 chr10 87417861 87418188 -58171100 - AluSx SINE Alu 0 319 1 3877 123 56 50 chr10 87418188 87418332 -58170956 + MER50 LTR ERV1 569 711 -23 628 210 51 60 chr10 87418431 87418714 -58170574 - LTR29 LTR ERV1 -89 529 221 2076 127 0 13 chr10 87418873 87419189 -58170099 + AluSx SINE Alu 1 312 0 491 97 27 12 chr10 87419543 87419729 -58169559 - AluSg/x SINE Alu -16 293 74 519 125 0 0 chr10 87419832 87419904 -58169384 - MER69 DNA AcHobo -5 2521 2450 * 583 186 28 35 chr10 87419900 87420045 -58169243 - MER69 DNA AcHobo -1079 147 4 183 303 30 0 chr10 87420088 87420154 -58169134 - L2 LINE L2 -74 3239 3172 323 212 10 101 chr10 87420470 87420569 -58168719 + Charlie8 DNA MER1_type 140 229 -2188 2187 113 102 15 chr10 87421335 87421670 -58167618 - THE1B LTR MaLR 0 364 1 396 267 84 8 chr10 87421828 87421959 -58167329 - MIR SINE MIR -61 201 61 617 274 11 28 chr10 87422715 87422894 -58166394 - MIR3 SINE MIR -7 201 26 2358 57 0 7 chr10 87423328 87423624 -58165664 + AluY SINE Alu 1 294 -17 338 237 74 44 chr10 87423957 87424092 -58165196 + MLT1J LTR MaLR 6 144 -367 594 263 56 11 chr10 87424144 87424323 -58164965 + MER5A DNA MER1_type 1 187 -2 267 93 0 0 chr10 87424417 87424460 -58164828 + (GA)n Simple_repeat Simple_repeat 2 44 0 2357 66 0 3 chr10 87424783 87425084 -58164204 - AluY SINE Alu -11 300 1 992 134 0 0 chr10 87425211 87425353 -58163935 + AluJb SINE Alu 1 142 -170 25 51 0 0 chr10 87425357 87425396 -58163892 + AT_rich Low_complexity Low_complexity 1 39 0 634 124 0 48 chr10 87426436 87426541 -58162747 + AluJ/FLAM SINE Alu 1 100 -212 204 40 0 0 chr10 87426543 87426568 -58162720 + (TTCA)n Simple_repeat Simple_repeat 4 28 0 420 264 284 26 chr10 87426913 87427258 -58162030 + L2 LINE L2 1976 2409 -905 2253 100 3 0 chr10 87428451 87428752 -58160536 + AluSx SINE Alu 1 302 -10 376 214 56 0 chr10 87429747 87429836 -58159452 - MIR SINE MIR -57 205 112 252 0 0 0 chr10 87430105 87430133 -58159155 + (CAGGG)n Simple_repeat Simple_repeat 3 30 0 689 244 196 0 chr10 87430925 87431244 -58158044 - L1ME3A LINE L1 -68 6097 5689 1683 155 52 0 chr10 87431245 87431637 -58157651 - AluJb SINE Alu 0 411 5 324 218 90 0 chr10 87431641 87431719 -58157569 - L1ME3A LINE L1 -469 5701 5617 * 994 225 24 4 chr10 87431709 87431946 -58157342 - L1MC4a LINE L1 -1198 6610 6398 * 4730 212 42 51 chr10 87431938 87433144 -58156144 + L1MC4a LINE L1 6614 7808 0 191 333 49 20 chr10 87433171 87433273 -58156015 + L2 LINE L2 2715 2819 -495 358 282 94 8 chr10 87433644 87433761 -58155527 - MIR SINE MIR -101 161 35 180 265 0 0 chr10 87434199 87434248 -58155040 + MIR SINE MIR 143 191 -71 2175 161 14 83 chr10 87434257 87434577 -58154711 + L1PB1 LINE L1 5786 6126 -179 261 130 0 0 chr10 87434577 87434618 -58154670 + Alu SINE Alu 1 35 -267 2175 161 14 83 chr10 87434618 87434651 -58154637 + L1PB1 LINE L1 6126 6160 -145 2305 77 0 16 chr10 87434651 87434964 -58154324 - AluY SINE Alu -3 308 1 2175 161 14 83 chr10 87434964 87435167 -58154121 + L1PB1 LINE L1 6160 6305 0 1851 122 11 18 chr10 87435299 87435621 -58153667 - AluSx SINE Alu 0 320 1 339 25 0 0 chr10 87435623 87435663 -58153625 + (TTA)n Simple_repeat Simple_repeat 2 41 0 1779 103 9 125 chr10 87435663 87435984 -58153304 - AluSx SINE Alu -18 284 1 2778 150 2 28 chr10 87436125 87436266 -58153022 + L1PB3 LINE L1 5694 5837 -317 2219 73 0 45 chr10 87436266 87436579 -58152709 - AluY SINE Alu -11 300 2 2778 150 2 28 chr10 87436579 87436903 -58152385 + L1PB3 LINE L1 5837 6147 -7 204 97 0 0 chr10 87437391 87437422 -58151866 + (A)n Simple_repeat Simple_repeat 1 31 0 1599 176 3 14 chr10 87437423 87437718 -58151570 - AluJo SINE Alu -9 303 12 443 280 140 29 chr10 87438562 87438769 -58150519 + MIR SINE MIR 20 249 -13 2232 90 0 3 chr10 87439056 87439355 -58149933 - AluSx SINE Alu -14 298 1 40 21 0 0 chr10 87439378 87439425 -58149863 + AT_rich Low_complexity Low_complexity 1 47 0 1619 154 30 40 chr10 87439425 87439724 -58149564 - AluJo SINE Alu -16 296 1 808 118 0 17 chr10 87439820 87439939 -58149349 + FLAM_C SINE Alu 2 118 -25 33 43 0 0 chr10 87439939 87439986 -58149302 + AT_rich Low_complexity Low_complexity 1 47 0 458 293 55 40 chr10 87440232 87440468 -58148820 + L1MC4a LINE L1 4883 5114 -1007 1953 56 0 42 chr10 87440468 87440753 -58148535 + AluY SINE Alu 39 311 0 458 293 55 40 chr10 87440753 87441061 -58148227 + L1MC4a LINE L1 5114 5510 -611 2337 61 0 49 chr10 87441107 87441433 -58147855 - AluY SINE Alu 0 311 2 542 264 50 67 chr10 87441558 87441857 -58147431 + L1MC4a LINE L1 5570 5863 -1945 2059 105 10 3 chr10 87441859 87442153 -58147135 - AluSx SINE Alu -16 296 1 194 264 69 28 chr10 87442626 87442698 -58146590 - MER5A DNA MER1_type -19 170 96 546 194 8 23 chr10 87443073 87443202 -58146086 + LTR37A LTR ERV1 296 422 -4 323 324 11 6 chr10 87443916 87444092 -58145196 + GA-rich Low_complexity Low_complexity 1 177 0 244 307 21 29 chr10 87444138 87444278 -58145010 + GA-rich Low_complexity Low_complexity 2 140 0 1722 120 0 4 chr10 87444733 87444992 -58144296 + AluSg SINE Alu 50 307 -3 589 216 21 46 chr10 87445076 87445270 -58144018 - L1MC5 LINE L1 -30 7931 7743 2293 77 0 10 chr10 87445275 87445587 -58143701 - AluY SINE Alu -2 309 1 1867 130 55 0 chr10 87445984 87446276 -58143012 + AluSx SINE Alu 1 308 -4 22 0 0 0 chr10 87446926 87446948 -58142340 + AT_rich Low_complexity Low_complexity 1 22 0 398 259 54 18 chr10 87447214 87447326 -58141962 - MIR SINE MIR -50 212 97 1841 100 45 4 chr10 87447453 87447745 -58141543 + AluSc SINE Alu 2 304 0 2084 111 3 0 chr10 87447827 87448124 -58141164 + AluSp SINE Alu 1 298 -15 2278 112 0 0 chr10 87448134 87448430 -58140858 + AluSq SINE Alu 1 296 -17 450 260 62 27 chr10 87448431 87448577 -58140711 + L1MC4a LINE L1 5477 5627 -2181 334 189 180 18 chr10 87448642 87448753 -58140535 + L1MC4a LINE L1 5786 5914 -1894 2141 133 0 0 chr10 87448980 87449273 -58140015 + AluSx SINE Alu 1 293 -19 828 149 0 8 chr10 87449482 87449616 -58139672 - FLAM_C SINE Alu 0 133 1 2265 93 3 7 chr10 87449633 87449923 -58139365 - AluSq SINE Alu -24 289 1 341 210 59 17 chr10 87450049 87450168 -58139120 - Charlie1 DNA MER1_type -29 2732 2609 2018 144 17 0 chr10 87450195 87450487 -58138801 - AluSx SINE Alu -15 297 1 248 244 24 49 chr10 87450534 87450616 -58138672 - Charlie1a DNA MER1_type -1325 130 51 2033 139 3 3 chr10 87450674 87450969 -58138319 - AluSx SINE Alu -17 295 1 1632 165 25 14 chr10 87451014 87451293 -58137995 + AluSx SINE Alu 1 282 -30 186 194 45 0 chr10 87451302 87451369 -58137919 + (TA)n Simple_repeat Simple_repeat 1 70 0 2561 52 0 7 chr10 87451425 87451731 -58137557 + AluY SINE Alu 1 304 -7 24 32 0 0 chr10 87451771 87451802 -58137486 + AT_rich Low_complexity Low_complexity 1 31 0 462 268 57 89 chr10 87451904 87452109 -58137179 + MER31-int LTR ERV1 2456 2666 -2270 2143 121 30 3 chr10 87452109 87452414 -58136874 - AluSq SINE Alu 0 313 1 462 268 57 89 chr10 87452414 87452700 -58136588 + MER31-int LTR ERV1 2666 2931 -2005 1071 217 57 13 chr10 87452736 87453035 -58136253 + LTR37A LTR ERV1 1 312 -114 1449 211 59 3 chr10 87453056 87453227 -58136061 - AluJb SINE Alu -7 305 110 357 24 0 0 chr10 87453227 87453269 -58136019 + (ATG)n Simple_repeat Simple_repeat 1 42 0 1449 211 59 3 chr10 87453269 87453386 -58135902 - AluJb SINE Alu -202 110 1 186 43 0 0 chr10 87453704 87453727 -58135561 + (GA)n Simple_repeat Simple_repeat 2 24 0 2340 108 3 16 chr10 87453753 87454069 -58135219 + AluSx SINE Alu 1 312 0 631 248 196 0 chr10 87454274 87454593 -58134695 - L1ME3A LINE L1 -68 6097 5689 1823 155 52 0 chr10 87454594 87454986 -58134302 - AluJb SINE Alu 0 411 5 303 218 90 0 chr10 87454990 87455068 -58134220 - L1ME3A LINE L1 -469 5701 5617 * 951 217 24 4 chr10 87455058 87455295 -58133993 - L1MC4a LINE L1 -1198 6610 6402 * 4472 212 42 51 chr10 87455287 87456493 -58132795 + L1MC4a LINE L1 6614 7808 0 198 333 49 20 chr10 87456520 87456622 -58132666 + L2 LINE L2 2715 2819 -495 359 282 94 8 chr10 87456993 87457110 -58132178 - MIR SINE MIR -101 161 35 2078 124 6 6 chr10 87457587 87457927 -58131361 + L1PB1 LINE L1 5766 6106 -45 244 114 0 0 chr10 87457928 87457963 -58131325 + Alu SINE Alu 1 35 -264 2453 77 0 16 chr10 87458000 87458313 -58130975 - AluY SINE Alu -3 308 1 1190 86 16 21 chr10 87458329 87458516 -58130772 + L1MA3 LINE L1 6120 6305 0 2001 131 10 17 chr10 87458672 87458970 -58130318 - AluSx SINE Alu -16 296 1 339 25 0 0 chr10 87458972 87459012 -58130276 + (TTA)n Simple_repeat Simple_repeat 2 41 0 1818 103 9 125 chr10 87459012 87459333 -58129955 - AluSx SINE Alu -18 284 1 2794 150 2 28 chr10 87459474 87459615 -58129673 + L1PB3 LINE L1 5694 5837 -317 2365 73 0 45 chr10 87459615 87459928 -58129360 - AluY SINE Alu -11 300 2 2794 150 2 28 chr10 87459928 87460252 -58129036 + L1PB3 LINE L1 5837 6147 -7 204 97 0 0 chr10 87460740 87460771 -58128517 + (A)n Simple_repeat Simple_repeat 1 31 0 1747 176 3 14 chr10 87460772 87461067 -58128221 - AluJo SINE Alu -9 303 12 435 280 140 29 chr10 87461911 87462118 -58127170 + MIR SINE MIR 20 249 -13 2377 90 0 3 chr10 87462405 87462704 -58126584 - AluSx SINE Alu -14 298 1 35 0 0 0 chr10 87462727 87462762 -58126526 + AT_rich Low_complexity Low_complexity 1 35 0 1762 152 29 48 chr10 87462763 87463073 -58126215 - AluJo SINE Alu -8 304 1 839 117 0 17 chr10 87463168 87463288 -58126000 + FLAM_C SINE Alu 1 118 -25 33 43 0 0 chr10 87463288 87463335 -58125953 + AT_rich Low_complexity Low_complexity 1 47 0 368 296 45 38 chr10 87463581 87463817 -58125471 + L1MC4a LINE L1 4883 5116 -1005 2107 57 0 36 chr10 87463817 87464098 -58125190 + AluY SINE Alu 39 309 -2 368 296 45 38 chr10 87464098 87464410 -58124878 + L1MC4a LINE L1 5116 5510 -611 2494 58 0 49 chr10 87464456 87464782 -58124506 - AluY SINE Alu 0 311 2 458 291 49 42 chr10 87464917 87465202 -58124086 + L1MC4a LINE L1 5576 5862 -1946 2204 108 10 3 chr10 87465202 87465499 -58123789 - AluSx SINE Alu -13 299 1 194 264 69 28 chr10 87465972 87466044 -58123244 - MER5A DNA MER1_type -19 170 96 524 209 8 23 chr10 87466419 87466548 -58122740 + LTR37A LTR ERV1 296 422 -4 183 297 132 22 chr10 87466675 87466766 -58122522 + MIR SINE MIR 41 141 -67 323 324 11 6 chr10 87467262 87467438 -58121850 + GA-rich Low_complexity Low_complexity 1 177 0 244 307 21 29 chr10 87467484 87467624 -58121664 + GA-rich Low_complexity Low_complexity 2 140 0 1849 120 0 4 chr10 87468079 87468338 -58120950 + AluSg SINE Alu 50 307 -3 1642 203 45 73 chr10 87468422 87468621 -58120667 - L1MC5 LINE L1 -30 7931 7728 2329 129 0 0 chr10 87468621 87468931 -58120357 - AluSx SINE Alu -2 310 1 1642 203 45 73 chr10 87468931 87469348 -58119940 - L1MC5 LINE L1 -233 7728 7332 2259 78 0 11 chr10 87469370 87469689 -58119599 - AluY SINE Alu 0 316 1 2275 104 0 41 chr10 87469689 87470006 -58119282 - AluSx SINE Alu -8 304 1 1665 202 0 22 chr10 87470829 87471024 -58118264 - AluJo SINE Alu -2 310 123 315 0 0 0 chr10 87471024 87471059 -58118229 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1665 202 0 22 chr10 87471059 87471180 -58118108 - AluJo SINE Alu -189 123 1 316 312 88 2 chr10 87471264 87471401 -58117887 - MIR3 SINE MIR -52 156 9 201 282 92 80 chr10 87471922 87472000 -58117288 - L3 LINE CR1 -339 1238 1162 2096 154 0 0 chr10 87472000 87472299 -58116989 + AluJb SINE Alu 1 299 -13 201 282 92 80 chr10 87472299 87472383 -58116905 - L3 LINE CR1 -415 1162 1074 579 228 15 95 chr10 87472489 87472752 -58116536 - L1MC5 LINE L1 -48 7913 7672 211 287 138 21 chr10 87473000 87473094 -58116194 + MIR SINE MIR 30 134 -74 2619 40 0 3 chr10 87473319 87473619 -58115669 - AluY SINE Alu -12 299 1 189 380 58 16 chr10 87473660 87473902 -58115386 + L2 LINE L2 938 1189 -2125 225 125 0 0 chr10 87474071 87474103 -58115185 + MER63 DNA MER1_type 703 734 -328 887 101 7 50 chr10 87474107 87474246 -58115042 - FLAM_C SINE Alu 0 143 11 251 237 0 0 chr10 87474272 87474331 -58114957 + MER63 DNA MER1_type 968 1026 -35 226 297 139 67 chr10 87474471 87474916 -58114372 + L2 LINE L2 1563 2039 -1275 845 88 35 0 chr10 87475083 87475197 -58114091 - AluY SINE Alu -193 118 1 318 295 269 0 chr10 87475307 87475463 -58113825 + MIR SINE MIR 65 262 0 2301 88 0 0 chr10 87475685 87476005 -58113283 + AluSx SINE Alu 1 320 0 1504 202 43 52 chr10 87476835 87477092 -58112196 + Charlie4a DNA MER1_type 49 307 -1654 1952 147 0 13 chr10 87477092 87477391 -58111897 - AluJb SINE Alu -17 295 1 1504 202 43 52 chr10 87477391 87477419 -58111869 + Charlie4a DNA MER1_type 307 334 -1627 1827 109 19 89 chr10 87477419 87477732 -58111556 - AluSx SINE Alu -21 291 1 1504 202 43 52 chr10 87477732 87477758 -58111530 + Charlie4a DNA MER1_type 334 359 -1602 2426 94 3 0 chr10 87477758 87478065 -58111223 - AluSx SINE Alu -4 308 1 1504 202 43 52 chr10 87478065 87478211 -58111077 + Charlie4a DNA MER1_type 359 504 -4 182 207 37 73 chr10 87478430 87478512 -58110776 - MIR3 SINE MIR -129 79 1 2881 185 20 43 chr10 87479738 87479791 -58109497 - L1MB5 LINE L1 -10 6662 6609 2320 113 7 3 chr10 87479791 87480101 -58109187 + AluJb SINE Alu 1 311 -1 2881 185 20 43 chr10 87480101 87480295 -58108993 - L1MB5 LINE L1 -63 6609 6412 2759 164 20 80 chr10 87480295 87480880 -58108408 + MER44D DNA MER2_type 1 605 0 2881 185 20 43 chr10 87480880 87481028 -58108260 - L1MB5 LINE L1 -260 6412 6262 2288 117 0 0 chr10 87481028 87481327 -58107961 - AluSg SINE Alu -11 299 1 2881 185 20 43 chr10 87481327 87481577 -58107711 - L1MB5 LINE L1 -410 6262 6030 1232 227 13 10 chr10 87481577 87481756 -58107532 - L1MB5 LINE L1 -2119 4525 4343 2457 88 0 13 chr10 87481756 87482061 -58107227 - AluSx SINE Alu -11 301 1 1232 227 13 10 chr10 87482061 87482180 -58107108 - L1MB5 LINE L1 -2301 4343 4226 * 7068 168 23 7 chr10 87482179 87483448 -58105840 + L1M1 LINE L1 813 2101 -5464 4659 228 120 28 chr10 87483448 87484251 -58105037 - L1MB5 LINE L1 -4784 1862 1135 1770 162 0 4 chr10 87484251 87484522 -58104766 - AluJb SINE Alu -42 270 1 4659 228 120 28 chr10 87484522 87485414 -58103874 - L1MB5 LINE L1 -5511 1135 7 446 264 108 14 chr10 87485436 87485584 -58103704 - MIR3 SINE MIR -46 162 1 398 264 83 8 chr10 87486203 87486324 -58102964 + MER5A DNA MER1_type 58 187 -2 192 276 23 58 chr10 87486250 87486337 -58102951 - MER5A DNA MER1_type -102 87 4 * 281 127 0 73 chr10 87486404 87486459 -58102829 - MER96B DNA MER1_type? -5 412 362 3097 149 51 35 chr10 87486888 87487492 -58101796 - LTR18B LTR ERVL 0 614 1 1179 252 65 16 chr10 87487519 87487841 -58101447 - MER102b DNA MER1_type -3 338 1 1575 189 27 10 chr10 87488301 87488473 -58100815 - AluJo SINE Alu -6 306 125 2312 94 3 7 chr10 87488473 87488771 -58100517 - AluSx SINE Alu -15 297 1 1575 189 27 10 chr10 87488771 87488899 -58100389 - AluJo SINE Alu -187 125 1 2074 109 39 3 chr10 87490890 87491173 -58098115 - AluSx SINE Alu -19 293 1 583 312 69 18 chr10 87491398 87491616 -58097672 - MIR SINE MIR -28 234 6 1662 180 80 50 chr10 87493587 87493964 -58095324 + MLT1B LTR MaLR 1 388 -2 446 310 65 0 chr10 87494670 87494825 -58094463 + MIR SINE MIR 1 165 -97 516 286 239 19 chr10 87494939 87495961 -58093327 + L2 LINE L2 2008 3313 0 207 245 20 0 chr10 87496022 87496071 -58093217 + MIR3 SINE MIR 151 200 -8 355 259 123 65 chr10 87496846 87497016 -58092272 + MIR3 SINE MIR 10 189 -19 243 230 35 92 chr10 87497483 87497570 -58091718 - MIR SINE MIR -102 160 79 271 306 90 9 chr10 87498743 87498854 -58090434 - MIR SINE MIR -115 147 28 1004 224 5 14 chr10 87499027 87499237 -58090051 + MIR SINE MIR 21 228 -34 194 161 0 0 chr10 87499359 87499390 -58089898 - MIR SINE MIR -165 97 67 372 94 0 0 chr10 87500400 87500453 -58088835 + (CA)n Simple_repeat Simple_repeat 1 53 0 310 273 187 7 chr10 87500665 87500804 -58088484 + MER5A DNA MER1_type 26 189 0 205 167 19 56 chr10 87502097 87502151 -58087137 - MER91B DNA MER1_type -135 55 4 1936 163 0 22 chr10 87502887 87503206 -58086082 - AluJb SINE Alu 0 312 1 273 284 154 38 chr10 87503791 87503950 -58085338 - MIR SINE MIR -56 206 35 612 255 133 49 chr10 87504136 87504620 -58084668 + L2 LINE L2 2759 3282 -31 476 171 0 11 chr10 87504910 87504998 -58084290 - MIR3 SINE MIR -21 187 101 271 243 61 52 chr10 87505846 87505991 -58083297 + MIR SINE MIR 62 208 -54 209 303 91 30 chr10 87506280 87506379 -58082909 + MIR3 SINE MIR 61 165 -43 193 338 119 0 chr10 87506788 87506948 -58082340 - MIR SINE MIR -53 209 31 699 207 124 6 chr10 87508188 87508357 -58080931 - MER5A DNA MER1_type 0 189 1 1099 134 128 0 chr10 87508430 87508617 -58080671 - AluJo SINE Alu -18 294 84 2443 107 0 0 chr10 87508636 87508946 -58080342 - AluSx SINE Alu -2 310 1 1826 134 54 0 chr10 87508949 87509226 -58080062 - AluSx SINE Alu -20 292 1 2376 91 10 0 chr10 87510144 87510451 -58078837 + AluSx SINE Alu 1 310 -2 438 274 137 0 chr10 87510453 87510650 -58078638 + L1MC/D LINE L1 5588 5811 -1997 198 294 249 34 chr10 87511265 87511351 -58077937 - L3 LINE CR1 -343 1234 1168 2076 100 0 31 chr10 87511351 87511641 -58077647 - AluSx SINE Alu -14 298 18 198 294 249 34 chr10 87511641 87511731 -58077557 - L3 LINE CR1 -409 1168 1020 529 333 94 19 chr10 87511745 87512108 -58077180 - L3 LINE CR1 -701 876 487 216 0 0 0 chr10 87512580 87512604 -58076684 + (TC)n Simple_repeat Simple_repeat 2 25 0 810 200 7 0 chr10 87512995 87513140 -58076148 - MER5A DNA MER1_type -30 159 14 413 213 66 115 chr10 87513141 87513324 -58075964 - MER5A DNA MER1_type -14 175 2 1681 94 106 196 chr10 87513373 87513843 -58075445 + MSTA LTR MaLR 1 428 0 2406 167 55 7 chr10 87513901 87514337 -58074951 + LTR32 LTR ERVL 15 471 0 1527 203 135 0 chr10 87515127 87515476 -58073812 + MSTD LTR MaLR 1 396 0 1905 154 0 37 chr10 87515538 87515862 -58073426 + AluJb SINE Alu 1 312 0 766 147 42 5 chr10 87515867 87516679 -58072609 + L1MC1 LINE L1 5188 6333 0 230 250 10 0 chr10 87516821 87516903 -58072385 + (TA)n Simple_repeat Simple_repeat 1 86 -11 1222 92 6 11 chr10 87516903 87517077 -58072211 - L1PA8 LINE L1 -9 6163 5991 230 250 10 0 chr10 87517077 87517090 -58072198 + (TA)n Simple_repeat Simple_repeat 86 97 0 538 194 123 32 chr10 87517208 87517363 -58071925 + MER21B LTR ERV1 638 806 -57 231 241 241 9 chr10 87517818 87517934 -58071354 - MIR3 SINE MIR 0 208 66 557 184 148 10 chr10 87518417 87518613 -58070675 - L1MC5 LINE L1 -57 7904 7682 387 150 0 0 chr10 87518615 87518675 -58070613 - Tigger5 DNA MER2_type 0 2323 2264 555 167 0 0 chr10 87518697 87518781 -58070507 + Tigger5 DNA MER2_type 5 88 -2235 322 182 0 0 chr10 87518845 87518900 -58070388 - Tigger5 DNA MER2_type -2268 55 1 202 250 194 0 chr10 87519220 87519292 -58069996 + L2 LINE L2 3187 3272 0 316 287 33 16 chr10 87519840 87519962 -58069326 - MER103 DNA DNA -36 130 7 927 209 124 13 chr10 87519962 87520196 -58069092 - MIR SINE MIR 0 262 3 191 286 0 20 chr10 87520265 87520314 -58068974 + MIR SINE MIR 20 67 -141 670 266 13 7 chr10 87520378 87520532 -58068756 + MIR SINE MIR 2 156 -106 2066 170 34 17 chr10 87521523 87521881 -58067407 + MLT1A1 LTR MaLR 1 364 -1 243 0 0 0 chr10 87521915 87521942 -58067346 + (CA)n Simple_repeat Simple_repeat 1 27 0 506 294 39 52 chr10 87522685 87522916 -58066372 + MIR SINE MIR 25 252 -10 299 265 157 43 chr10 87522915 87523100 -58066188 + MIR SINE MIR 7 212 -50 * 986 236 49 31 chr10 87523397 87523786 -58065502 + MLT1D LTR MaLR 45 440 -65 731 72 0 0 chr10 87523794 87523891 -58065397 + L1M3 LINE L1 5549 5645 -523 1070 170 5 62 chr10 87523892 87524116 -58065172 - MER46A DNA MER2_type 0 236 26 379 149 28 93 chr10 87524084 87524124 -58065164 + MLT1D LTR MaLR 403 444 -61 * 2884 171 13 4 chr10 87524124 87524651 -58064637 + L1MB3 LINE L1 5643 6174 -9 379 149 28 93 chr10 87524651 87524717 -58064571 + MLT1D LTR MaLR 444 502 -3 459 186 40 0 chr10 87524720 87524844 -58064444 + L1MA7 LINE L1 6162 6290 -1 1488 111 0 0 chr10 87524844 87525043 -58064245 - AluY SINE Alu -9 302 104 609 223 51 35 chr10 87527355 87527602 -58061686 - LTR29 LTR ERV1 -135 509 221 2260 123 0 13 chr10 87527761 87528077 -58061211 + AluSx SINE Alu 1 312 0 312 238 27 96 chr10 87528106 87528203 -58061085 - L1M4 LINE L1 -778 5368 5266 1808 176 3 3 chr10 87528203 87528492 -58060796 + AluJo SINE Alu 2 290 -22 312 238 27 96 chr10 87528492 87528629 -58060659 - L1M4 LINE L1 -880 5266 5151 1233 251 86 102 chr10 87528629 87528950 -58060338 + MLT1E1 LTR MaLR 1 326 -328 2017 138 0 20 chr10 87528950 87529254 -58060034 - AluSx SINE Alu -14 298 1 1233 251 86 102 chr10 87529254 87529597 -58059691 + MLT1E1 LTR MaLR 326 654 0 312 238 27 96 chr10 87529597 87529622 -58059666 - L1M4 LINE L1 -995 5151 5126 2078 123 3 29 chr10 87529666 87529976 -58059312 + AluSq SINE Alu 1 302 -11 2266 82 0 24 chr10 87530345 87530638 -58058650 + AluSc SINE Alu 1 286 -23 327 340 49 0 chr10 87531762 87531906 -58057382 + L1M4 LINE L1 2470 2620 -3526 296 311 47 16 chr10 87531974 87532231 -58057057 + L1M4 LINE L1 2681 2945 -3201 412 267 51 70 chr10 87532744 87533017 -58056271 + MER113 DNA MER1_type? 94 361 -160 215 200 50 33 chr10 87533784 87533844 -58055444 + MIR SINE MIR 120 180 -82 201 174 0 87 chr10 87534279 87534348 -58054940 + (TCTCTG)n Simple_repeat Simple_repeat 6 68 0 237 291 24 12 chr10 87534426 87534591 -58054697 + (TG)n Simple_repeat Simple_repeat 2 168 0 312 27 0 0 chr10 87534626 87534663 -58054625 + (TG)n Simple_repeat Simple_repeat 1 37 0 2291 129 0 0 chr10 87535848 87536159 -58053129 + AluSq SINE Alu 3 313 0 541 264 88 26 chr10 87536528 87536801 -58052487 + MLT1I LTR MaLR 75 364 -45 545 299 61 30 chr10 87536891 87537122 -58052166 + MIR SINE MIR 21 258 -4 437 283 33 0 chr10 87537417 87537569 -58051719 - MER112 DNA MER1_type -103 157 1 2068 157 3 0 chr10 87538079 87538385 -58050903 + AluSq SINE Alu 5 311 -2 363 276 87 76 chr10 87538389 87538706 -58050582 + L1M3de LINE L1 1300 1612 -4922 1857 122 6 100 chr10 87538706 87539035 -58050253 + AluSx SINE Alu 1 298 -14 2290 117 0 0 chr10 87539037 87539389 -58049899 + AluY SINE Alu 1 311 0 363 276 87 76 chr10 87539389 87539717 -58049571 + L1M3de LINE L1 1612 1921 -4613 340 262 192 5 chr10 87539870 87540084 -58049204 + L1M3de LINE L1 3626 3879 -2661 836 129 0 0 chr10 87540132 87540248 -58049040 + AluJb SINE Alu 1 116 -196 654 296 72 58 chr10 87540273 87540469 -58048819 + L1M3de LINE L1 4667 4859 -1681 2077 143 3 3 chr10 87540469 87540776 -58048512 + AluSx SINE Alu 1 307 -5 654 296 72 58 chr10 87540776 87540831 -58048457 + L1M3de LINE L1 4859 4912 -1628 1909 130 7 0 chr10 87540831 87541124 -58048164 - L1PA13 LINE L1 -7 6156 5862 654 296 72 58 chr10 87541124 87541222 -58048066 + L1M3de LINE L1 4912 5007 -1533 2047 116 0 24 chr10 87541222 87541514 -58047774 - AluSx SINE Alu -14 298 14 654 296 72 58 chr10 87541514 87541931 -58047357 + L1M3de LINE L1 5007 5445 -1095 662 169 17 8 chr10 87541946 87542064 -58047224 - AluSg/x SINE Alu -17 295 177 227 203 29 29 chr10 87542310 87542379 -58046909 + (CATCT)n Simple_repeat Simple_repeat 5 73 0 1511 217 3 7 chr10 87542554 87542844 -58046444 + AluJo SINE Alu 2 290 -22 933 282 80 59 chr10 87542853 87542981 -58046307 - L1M4 LINE L1 -874 5272 5148 1328 255 88 76 chr10 87542981 87543283 -58046005 + MLT1E1 LTR MaLR 1 298 -356 1966 131 0 30 chr10 87543283 87543606 -58045682 - AluSx SINE Alu 0 312 1 1328 255 88 76 chr10 87543606 87543949 -58045339 + MLT1E1 LTR MaLR 298 654 0 933 282 80 59 chr10 87543949 87544018 -58045270 - L1M4 LINE L1 -998 5148 5082 2268 119 0 0 chr10 87544018 87544313 -58044975 + AluSx SINE Alu 1 295 -17 933 282 80 59 chr10 87544313 87544745 -58044543 - L1M4 LINE L1 -1064 5082 4660 2047 116 0 24 chr10 87544745 87545037 -58044251 + AluSx SINE Alu 14 298 -14 933 282 80 59 chr10 87545037 87545135 -58044153 - L1M4 LINE L1 -1486 4660 4565 1977 126 3 0 chr10 87545135 87545429 -58043859 + L1PA13 LINE L1 5862 6156 -7 933 282 80 59 chr10 87545429 87545481 -58043807 - L1M4 LINE L1 -1581 4565 4516 2078 145 3 3 chr10 87545481 87545791 -58043497 - AluSx SINE Alu -2 310 1 933 282 80 59 chr10 87545791 87545987 -58043301 - L1M4 LINE L1 -1630 4516 4273 836 129 0 0 chr10 87546012 87546128 -58043160 - AluJb SINE Alu -196 116 1 340 262 192 5 chr10 87546176 87546390 -58042898 - L1M3de LINE L1 -2661 3879 3626 363 276 87 76 chr10 87546543 87546871 -58042417 - L1M3de LINE L1 -4613 1848 1525 2290 117 0 0 chr10 87546871 87547223 -58042065 - AluY SINE Alu 0 311 1 1857 122 6 100 chr10 87547225 87547554 -58041734 - AluSx SINE Alu -14 298 1 363 276 87 76 chr10 87547554 87547871 -58041417 - L1M3de LINE L1 -4936 1525 1300 2068 157 3 0 chr10 87547875 87548181 -58041107 - AluSq SINE Alu -2 311 5 437 283 33 0 chr10 87548691 87548843 -58040445 + MER112 DNA MER1_type 1 157 -103 509 312 61 30 chr10 87549138 87549369 -58039919 - MIR SINE MIR -4 258 21 541 264 88 26 chr10 87549460 87549733 -58039555 - MLT1I LTR MaLR -45 364 75 2297 129 0 0 chr10 87550102 87550413 -58038875 - AluSq SINE Alu 0 313 3 312 27 0 0 chr10 87551599 87551636 -58037652 + (CA)n Simple_repeat Simple_repeat 1 37 0 237 291 24 12 chr10 87551671 87551836 -58037452 + (CA)n Simple_repeat Simple_repeat 2 168 0 201 174 0 87 chr10 87551914 87551983 -58037305 + (CAGAGA)n Simple_repeat Simple_repeat 6 68 0 201 200 50 33 chr10 87552418 87552478 -58036810 - MIR SINE MIR -82 180 120 437 275 48 66 chr10 87553247 87553520 -58035768 - MER113 DNA MER1_type? -160 361 94 336 343 41 29 chr10 87554012 87554502 -58034786 - L1M4 LINE L1 -3181 2965 2470 2276 82 0 24 chr10 87555626 87555919 -58033369 - AluSc SINE Alu -23 286 1 1954 129 13 30 chr10 87556288 87556591 -58032697 - AluSq SINE Alu -11 302 5 1116 150 84 14 chr10 87556827 87557040 -58032248 - MER30 DNA MER1_type -2 228 1 35 54 0 0 chr10 87557580 87557636 -58031652 + AT_rich Low_complexity Low_complexity 1 56 0 1744 175 99 19 chr10 87557785 87558208 -58031080 - LTR48 LTR ERV1 0 787 331 434 198 0 10 chr10 87559429 87559530 -58029758 - L1MB2 LINE L1 -3 6168 6069 207 100 0 0 chr10 87561286 87561316 -58027972 + (TCCCC)n Simple_repeat Simple_repeat 1 30 0 189 0 0 0 chr10 87561488 87561509 -58027779 + (A)n Simple_repeat Simple_repeat 1 21 0 207 0 0 0 chr10 87562356 87562379 -58026909 + (CCG)n Simple_repeat Simple_repeat 2 24 0 252 287 66 53 chr10 87566219 87566405 -58022883 + MIR SINE MIR 16 208 -54 1581 197 0 36 chr10 87568351 87568660 -58020628 - AluJb SINE Alu -14 298 1 293 257 92 20 chr10 87570190 87570342 -58018946 + L1ME3 LINE L1 5909 6071 -91 355 183 39 13 chr10 87570748 87570901 -58018387 + GA-rich Low_complexity Low_complexity 2 158 0 287 307 0 62 chr10 87571069 87571261 -58018027 + GA-rich Low_complexity Low_complexity 1 180 0 2334 119 0 0 chr10 87571874 87572186 -58017102 - AluSx SINE Alu 0 312 1 331 283 80 43 chr10 87572972 87573110 -58016178 + L1M4 LINE L1 4744 4886 -1260 946 117 0 0 chr10 87573161 87573281 -58016007 + AluSq/x SINE Alu 1 120 -193 2349 120 0 0 chr10 87573845 87574144 -58015144 + AluSx SINE Alu 1 299 -13 2329 86 7 10 chr10 87574822 87575123 -58014165 + AluSq SINE Alu 1 300 -13 357 362 46 9 chr10 87575745 87575963 -58013325 - MIR SINE MIR -15 247 22 4741 120 12 15 chr10 87576830 87577690 -58011598 - HSMAR2 DNA Mariner -2 1300 352 1748 121 0 0 chr10 87577690 87577921 -58011367 - AluSg/x SINE Alu -4 306 76 4741 120 12 15 chr10 87577921 87578272 -58011016 - HSMAR2 DNA Mariner -950 352 2 216 0 0 0 chr10 87579658 87579682 -58009606 + (TGAG)n Simple_repeat Simple_repeat 4 27 0 39 38 0 0 chr10 87579791 87579844 -58009444 + AT_rich Low_complexity Low_complexity 1 53 0 320 301 104 65 chr10 87579852 87580131 -58009157 + L1 LINE L1 2667 2956 -3190 255 307 18 35 chr10 87581346 87581460 -58007828 - L1ME LINE L1 -541 5580 5469 4509 36 19 7 chr10 87581462 87582039 -58007249 - L1PA5 LINE L1 0 6154 5571 186 133 0 0 chr10 87582054 87582084 -58007204 + (TTTTC)n Simple_repeat Simple_repeat 5 34 0 1432 186 92 12 chr10 87582377 87582715 -58006573 + MLT1A1 LTR MaLR 1 365 0 3334 72 126 24 chr10 87583369 87583907 -58005381 + LTR61 LTR ERV1 2 594 -1 180 333 120 26 chr10 87584131 87584248 -58005040 - L2 LINE L2 -23 3249 3122 646 167 51 0 chr10 87584283 87584421 -58004867 + L1MA9 LINE L1 6168 6312 0 26 50 0 0 chr10 87584486 87584526 -58004762 + AT_rich Low_complexity Low_complexity 1 40 0 293 294 118 16 chr10 87584859 87585104 -58004184 - L2 LINE L2 -358 2956 2687 602 303 34 0 chr10 87585114 87585322 -58003966 + L2 LINE L2 1895 2109 -1205 394 352 74 5 chr10 87587651 87587867 -58001421 + MIR SINE MIR 25 255 -7 442 241 28 0 chr10 87590225 87590333 -57998955 - MER103 DNA DNA 0 166 56 207 282 113 0 chr10 87591573 87591644 -57997644 - MIR SINE MIR -70 138 60 432 35 69 35 chr10 87594327 87594443 -57994845 + (CACAG)n Simple_repeat Simple_repeat 2 121 0 183 321 18 0 chr10 87598093 87598149 -57991139 + MIR SINE MIR 85 141 -67 299 260 154 0 chr10 87598854 87598958 -57990330 + MIR SINE MIR 69 188 -74 2169 127 0 10 chr10 87600439 87600738 -57988550 - AluSx SINE Alu -16 296 1 207 0 0 0 chr10 87601542 87601565 -57987723 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1138 164 31 62 chr10 87602453 87602679 -57986609 - MER20 DNA MER1_type 0 219 1 1103 114 85 11 chr10 87602884 87603060 -57986228 + MER5A DNA MER1_type 1 189 0 963 155 53 25 chr10 87603631 87603869 -57985419 + L1MA6 LINE L1 6029 6294 -6 246 62 0 0 chr10 87604099 87604131 -57985157 + (TTC)n Simple_repeat Simple_repeat 2 33 0 207 0 0 0 chr10 87604901 87604924 -57984364 + (TG)n Simple_repeat Simple_repeat 2 24 0 460 326 74 21 chr10 87606174 87606416 -57982872 + MIR SINE MIR 8 262 0 391 248 33 85 chr10 87606472 87606597 -57982691 - L1MC4a LINE L1 -157 5964 5834 2273 95 0 17 chr10 87606597 87606891 -57982397 - AluSg SINE Alu -20 290 2 391 248 33 85 chr10 87606891 87607038 -57982250 - L1MC4a LINE L1 -287 5834 5683 798 158 0 0 chr10 87607965 87608085 -57981203 + MER39 LTR ERV1 588 707 0 2277 123 0 0 chr10 87608883 87609193 -57980095 + AluSx SINE Alu 1 310 -2 1440 286 86 42 chr10 87609497 87610196 -57979092 + L1M4 LINE L1 2 731 -5811 1969 120 6 22 chr10 87610197 87610547 -57978741 - MER4A LTR ERV1 -1 663 261 679 111 0 10 chr10 87610547 87610646 -57978642 - MER4A LTR ERV1 -566 98 1 1302 210 56 84 chr10 87610646 87611108 -57978180 + L1M4 LINE L1 728 1176 -5366 1102 156 6 0 chr10 87611108 87611281 -57978007 + AluSg/x SINE Alu 130 303 -7 2710 225 25 56 chr10 87611281 87612178 -57977110 + L1M4 LINE L1 1179 2047 -4599 2006 149 3 0 chr10 87612486 87612788 -57976500 - AluSq SINE Alu -10 303 1 26 30 0 0 chr10 87614979 87615012 -57974276 + AT_rich Low_complexity Low_complexity 1 33 0 2199 103 0 10 chr10 87615034 87615335 -57973953 + AluY SINE Alu 1 298 -13 318 255 110 7 chr10 87615400 87615545 -57973743 + L1M4 LINE L1 2212 2371 -4275 768 187 13 45 chr10 87615545 87615700 -57973588 + AluJo SINE Alu 1 150 -162 2299 107 3 0 chr10 87615944 87616243 -57973045 - AluSx SINE Alu -12 300 1 186 43 0 0 chr10 87616269 87616292 -57972996 + (TC)n Simple_repeat Simple_repeat 2 24 0 238 261 14 0 chr10 87616491 87616560 -57972728 + MER105 DNA DNA 11 80 -124 1407 211 59 3 chr10 87616610 87616727 -57972561 + AluJb SINE Alu 1 110 -202 357 24 0 0 chr10 87616727 87616769 -57972519 + (CAT)n Simple_repeat Simple_repeat 1 42 0 1407 211 59 3 chr10 87616769 87616940 -57972348 + AluJb SINE Alu 110 305 -7 1160 217 57 13 chr10 87616961 87617260 -57972028 - LTR37A LTR ERV1 -114 312 1 588 268 57 89 chr10 87617296 87617582 -57971706 - MER31-int LTR ERV1 -2005 2931 2666 2100 121 30 3 chr10 87617582 87617887 -57971401 + AluSq SINE Alu 1 313 0 588 268 57 89 chr10 87617887 87618092 -57971196 - MER31-int LTR ERV1 -2270 2666 2456 24 32 0 0 chr10 87618194 87618225 -57971063 + AT_rich Low_complexity Low_complexity 1 31 0 1310 145 68 68 chr10 87618272 87618582 -57970706 - AluSx SINE Alu -1 311 2 21 0 0 0 chr10 87618677 87618698 -57970590 + AT_rich Low_complexity Low_complexity 1 21 0 437 180 262 66 chr10 87618703 87618886 -57970402 - HAL1 LINE L1 -36 2471 2253 1121 211 85 126 chr10 87619025 87619565 -57969723 - HAL1 LINE L1 -604 1903 1386 232 222 0 48 chr10 87619568 87619631 -57969657 - HAL1 LINE L1 -1487 1020 961 520 197 155 21 chr10 87619665 87619858 -57969430 - HAL1 LINE L1 -1511 996 778 196 282 73 24 chr10 87620138 87620262 -57969026 + MIR SINE MIR 24 153 -55 1067 148 85 0 chr10 87620727 87620903 -57968385 - AluSg/x SINE Alu 0 312 122 2008 128 7 3 chr10 87620905 87621201 -57968087 - AluSq SINE Alu -16 297 1 1923 159 98 51 chr10 87621260 87621669 -57967619 + MSTA LTR MaLR 1 428 0 5188 177 57 64 chr10 87621941 87622072 -57967216 - L1MB5 LINE L1 0 6410 6280 1929 150 0 7 chr10 87622072 87622358 -57966930 - AluSx SINE Alu -28 284 1 5188 177 57 64 chr10 87622358 87624666 -57964622 - L1MB5 LINE L1 -130 6280 4003 * 40259 74 9 7 chr10 87624654 87625029 -57964259 - L1PA6 LINE L1 -4 6150 5777 2502 71 0 7 chr10 87625029 87625338 -57963950 - AluY SINE Alu 0 311 5 40259 74 9 7 chr10 87625338 87631089 -57958199 - L1PA6 LINE L1 -377 5777 11 1829 178 3 0 chr10 87631103 87631406 -57957882 - AluJo SINE Alu -8 304 1 5006 213 54 53 chr10 87631406 87631849 -57957439 - L1MB5 LINE L1 -2360 4022 3581 1996 154 3 3 chr10 87631849 87632147 -57957141 - AluSx SINE Alu -14 298 1 5006 213 54 53 chr10 87632147 87632378 -57956910 - L1MB5 LINE L1 -2801 3581 3352 1494 179 8 4 chr10 87632378 87632640 -57956648 - AluJb SINE Alu -39 273 11 5006 213 54 53 chr10 87632640 87633891 -57955397 - L1MB5 LINE L1 -3030 3352 2106 473 217 0 0 chr10 87633902 87633994 -57955294 - AluJ/FRAM SINE Alu -3 309 218 359 83 0 0 chr10 87634094 87634142 -57955146 + AluSg/x SINE Alu 195 242 -60 819 108 0 0 chr10 87634142 87634253 -57955035 - Alu SINE Alu -200 111 1 2077 119 0 3 chr10 87634773 87635058 -57954230 + AluSx SINE Alu 1 284 -28 253 335 3 0 chr10 87635092 87635200 -57954088 + L1MDb LINE L1 20 449 -5947 5097 111 47 41 chr10 87635202 87636573 -57952715 + pTR5 LTR ERV1 741 2438 0 1208 218 98 39 chr10 87637198 87637768 -57951520 - L1M4 LINE L1 -3323 2823 2113 2371 187 96 7 chr10 87637804 87638344 -57950944 + L1MC3 LINE L1 6540 7127 -658 1136 101 0 20 chr10 87638347 87638496 -57950792 + AluSq/x SINE Alu 5 150 -163 398 146 0 12 chr10 87638496 87638578 -57950710 + L1MC3 LINE L1 7554 7634 -151 1064 101 0 0 chr10 87638584 87638722 -57950566 + AluSp/q SINE Alu 163 300 -13 3275 172 35 27 chr10 87638722 87639379 -57949909 + L1MC3 LINE L1 7118 7779 -6 452 262 28 21 chr10 87639404 87639545 -57949743 - L2 LINE L2 0 3313 3172 391 331 41 80 chr10 87640095 87640457 -57948831 - L2 LINE L2 -338 2976 2629 21 36 0 0 chr10 87640806 87640834 -57948454 + AT_rich Low_complexity Low_complexity 1 28 0 2538 53 0 3 chr10 87640871 87641172 -57948116 - AluY SINE Alu -11 300 1 2247 101 7 3 chr10 87641626 87641922 -57947366 + AluSx SINE Alu 1 297 -15 1051 132 0 7 chr10 87641922 87642121 -57947167 + AluSg/x SINE Alu 132 329 0 9883 113 25 39 chr10 87642123 87642573 -57946715 + Tigger1 DNA MER2_type 69 524 -1894 2145 113 13 13 chr10 87642573 87642873 -57946415 + AluSx SINE Alu 1 300 -12 9883 113 25 39 chr10 87642873 87643670 -57945618 + Tigger1 DNA MER2_type 524 1292 -1126 2090 125 0 41 chr10 87643670 87643990 -57945298 - AluSq SINE Alu -6 307 1 9883 113 25 39 chr10 87643990 87644291 -57944997 + Tigger1 DNA MER2_type 1292 1596 -822 2739 122 166 4 chr10 87644289 87644772 -57944516 + Tigger1 DNA MER2_type 1858 2418 0 * 1989 123 60 0 chr10 87645246 87645531 -57943757 - AluSg SINE Alu -8 302 1 705 173 16 24 chr10 87645757 87645884 -57943404 + AluJb SINE Alu 133 258 -54 2424 52 10 3 chr10 87647132 87647422 -57941866 - AluY SINE Alu -19 292 1 331 154 0 0 chr10 87647453 87647505 -57941783 + Alu SINE Alu 1 52 -256 697 197 0 0 chr10 87647606 87647748 -57941540 - L1 LINE L1 -1664 4482 4341 4342 174 36 37 chr10 87647753 87648380 -57940908 + Cheshire DNA MER1_type 1484 2111 -309 2219 69 10 0 chr10 87648380 87648669 -57940619 - AluY SINE Alu -19 292 1 4342 174 36 37 chr10 87648669 87648950 -57940338 + Cheshire DNA MER1_type 2111 2391 -29 425 323 145 35 chr10 87650308 87650708 -57938580 + L2 LINE L2 1001 1444 -1870 224 275 310 4 chr10 87650893 87651122 -57938166 + L2 LINE L2 1758 2056 -1258 427 346 38 0 chr10 87652388 87652573 -57936715 - MIR SINE MIR -70 192 1 458 92 0 31 chr10 87652791 87652856 -57936432 - AluY SINE Alu -166 145 83 1593 66 0 5 chr10 87652971 87653169 -57936119 + AluY SINE Alu 100 296 -15 233 276 0 79 chr10 87653212 87653244 -57936044 - L2 LINE L2 -2 3311 3278 2367 102 3 0 chr10 87653244 87653548 -57935740 + AluSq SINE Alu 2 306 -7 233 276 0 79 chr10 87653548 87653591 -57935697 - L2 LINE L2 -35 3278 3242 1695 193 21 20 chr10 87653595 87653956 -57935332 + MLT1A1 LTR MaLR 1 365 0 296 383 77 50 chr10 87653956 87654256 -57935032 - L2 LINE L2 -93 3179 2872 1300 233 115 6 chr10 87654419 87654775 -57934513 + L1MC4a LINE L1 5536 5930 -1878 331 154 111 136 chr10 87654825 87654987 -57934301 + L1MC4a LINE L1 6191 6348 -1460 21 0 0 0 chr10 87655023 87655044 -57934244 + AT_rich Low_complexity Low_complexity 1 21 0 199 208 260 0 chr10 87656911 87656988 -57932300 - L2 LINE L2 -10 3303 3207 1913 138 7 3 chr10 87657130 87657428 -57931860 + AluSx SINE Alu 1 299 -13 242 174 22 0 chr10 87657744 87657790 -57931498 - MER5A DNA MER1_type -98 91 45 3722 119 21 70 chr10 87657798 87658713 -57930575 - pTR5 LTR ERV1 -143 2295 1113 483 86 111 0 chr10 87658813 87658894 -57930394 - pTR5 LTR ERV1 -1604 834 745 1913 189 93 0 chr10 87659066 87659462 -57929826 - MLT1D LTR MaLR -65 440 8 4388 202 58 31 chr10 87659464 87659605 -57929683 - L1MC4 LINE L1 -220 7822 7686 1946 151 0 40 chr10 87659605 87659930 -57929358 - AluJb SINE Alu 0 312 1 4388 202 58 31 chr10 87659930 87660934 -57928354 - L1MC4 LINE L1 -356 7686 6646 2312 93 0 19 chr10 87662194 87662505 -57926783 - AluSc SINE Alu -4 305 1 1014 236 138 77 chr10 87663156 87663635 -57925653 - Charlie2 DNA MER1_type -2192 590 83 1035 222 84 89 chr10 87664526 87664880 -57924408 - L1MEc LINE L1 -5152 1244 893 2476 88 0 0 chr10 87664880 87665188 -57924100 - AluSg SINE Alu -2 308 1 1035 222 84 89 chr10 87665188 87665419 -57923869 - L1MEc LINE L1 -5503 893 662 1999 94 102 105 chr10 87666082 87666498 -57922790 - LTR14B LTR ERVK 0 608 1 5199 138 44 29 chr10 87666649 87667352 -57921936 - L1MB3 LINE L1 0 6183 5471 203 88 29 0 chr10 87667352 87667386 -57921902 + (TTG)n Simple_repeat Simple_repeat 2 36 0 5199 138 44 29 chr10 87667386 87667678 -57921610 - L1MB3 LINE L1 -712 5471 5185 901 258 268 10 chr10 87667745 87668141 -57921147 + L2 LINE L2 2183 2680 -634 6912 83 16 6 chr10 87668281 87669270 -57920018 + L1PA12 LINE L1 5171 6168 0 2310 109 0 0 chr10 87669535 87669828 -57919460 - AluSx SINE Alu -19 293 1 369 205 181 0 chr10 87669903 87669986 -57919302 - MER45A DNA AcHobo -1 177 80 2307 104 10 0 chr10 87670877 87671186 -57918102 + AluSx SINE Alu 1 312 0 1763 163 14 0 chr10 87671239 87671527 -57917761 + AluJb SINE Alu 11 302 -10 677 245 25 31 chr10 87671543 87671739 -57917549 - MIR SINE MIR 0 262 68 1898 181 36 0 chr10 87673272 87673604 -57915684 - MLT1A1 LTR MaLR 0 365 22 2032 132 26 3 chr10 87673636 87673940 -57915348 + AluSx SINE Alu 1 311 -1 1537 144 30 4 chr10 87674112 87674348 -57914940 + AluSx SINE Alu 1 242 -70 307 149 0 0 chr10 87674530 87674601 -57914687 - Alu SINE Alu 0 313 243 240 380 37 9 chr10 87674772 87674880 -57914408 - MIR SINE MIR -65 143 33 520 200 11 0 chr10 87675387 87675482 -57913806 + MER5A DNA MER1_type 14 109 -80 522 278 52 39 chr10 87676736 87677097 -57912191 + L1ME2 LINE L1 5276 5635 -486 555 223 153 6 chr10 87677132 87677289 -57911999 + MER5A DNA MER1_type 7 186 -3 300 284 135 37 chr10 87677431 87677646 -57911642 + L1ME2 LINE L1 5648 5886 -278 306 0 0 0 chr10 87678233 87678267 -57911021 + (TA)n Simple_repeat Simple_repeat 2 35 0 2651 53 0 0 chr10 87678267 87678571 -57910717 - AluY SINE Alu -7 304 1 276 330 76 34 chr10 87678948 87679066 -57910222 + L2 LINE L2 3146 3268 -4 679 183 108 0 chr10 87680074 87680194 -57909094 + FLAM_C SINE Alu 1 133 0 692 209 20 7 chr10 87681019 87681167 -57908121 - MIR SINE MIR 0 262 113 313 317 135 0 chr10 87682241 87682345 -57906943 + L2 LINE L2 3144 3261 -11 261 0 0 0 chr10 87682554 87682583 -57906705 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1815 216 193 3 chr10 87682827 87683421 -57905867 + L1M4 LINE L1 1214 1920 -4726 5994 138 39 7 chr10 87683424 87685206 -57904082 + L1MA3 LINE L1 4220 6061 -244 1833 118 14 7 chr10 87685329 87685617 -57903671 + L1MA2 LINE L1 6015 6304 0 2183 154 88 0 chr10 87686472 87686836 -57902452 - MSTD LTR MaLR 0 396 1 2253 114 3 13 chr10 87687552 87687868 -57901420 - AluSq SINE Alu 0 313 1 747 348 166 9 chr10 87688403 87689173 -57900115 + L2 LINE L2 2045 2935 -379 242 383 37 0 chr10 87689263 87689370 -57899918 + L2 LINE L2 3142 3252 -20 306 306 192 23 chr10 87689438 87689845 -57899443 + L2 LINE L2 2584 2921 -351 386 230 195 9 chr10 87689845 87689958 -57899330 - MER94 DNA DNA 0 134 1 306 306 192 23 chr10 87689958 87690105 -57899183 + L2 LINE L2 2921 3272 0 186 71 0 0 chr10 87690429 87690457 -57898831 + (CAAAAA)n Simple_repeat Simple_repeat 4 31 0 28 29 0 0 chr10 87691382 87691417 -57897871 + AT_rich Low_complexity Low_complexity 1 35 0 208 260 117 13 chr10 87692534 87692611 -57896677 - L3 LINE CR1 -261 1316 1232 850 89 37 15 chr10 87692719 87692854 -57896434 - L1MA4 LINE L1 -1 6299 6162 1751 92 0 4 chr10 87693266 87693494 -57895794 + AluSg/x SINE Alu 86 312 0 2416 86 3 0 chr10 87693764 87694065 -57895223 + AluSp SINE Alu 1 302 -11 262 293 17 43 chr10 87694089 87694214 -57895074 - MIR SINE MIR -61 147 41 2348 109 0 0 chr10 87694730 87695032 -57894256 + AluSx SINE Alu 11 312 0 1771 236 62 0 chr10 87695107 87695513 -57893775 + Cheshire DNA MER1_type 2 432 -1988 792 139 15 44 chr10 87695523 87695660 -57893628 + FLAM_A SINE Alu 10 142 0 5223 182 31 18 chr10 87695661 87695873 -57893415 + Cheshire DNA MER1_type 443 651 -1769 1885 112 77 14 chr10 87695873 87696159 -57893129 + AluSx SINE Alu 1 304 -8 5223 182 31 18 chr10 87696159 87696558 -57892730 + Cheshire DNA MER1_type 651 1044 -1376 2971 73 3 0 chr10 87696558 87696912 -57892376 + THE1A LTR MaLR 1 355 0 5223 182 31 18 chr10 87696912 87697340 -57891948 + Cheshire DNA MER1_type 1044 1496 -924 298 243 0 27 chr10 87697497 87697571 -57891717 - Tigger1 DNA MER2_type -2346 72 1 194 229 0 49 chr10 87698665 87698726 -57890562 + MIR SINE MIR 176 233 -29 2296 119 0 0 chr10 87698947 87699259 -57890029 - AluSx SINE Alu 0 312 1 189 107 0 0 chr10 87699292 87699320 -57889968 + (TATATG)n Simple_repeat Simple_repeat 3 30 0 1193 106 55 18 chr10 87699333 87699550 -57889738 - L1MA8 LINE L1 -99 6192 5968 290 138 31 131 chr10 87699832 87699962 -57889326 - L2 LINE L2 -85 3228 3112 864 192 158 42 chr10 87699985 87700106 -57889182 - L1M4 LINE L1 -1127 5019 4913 2652 55 0 0 chr10 87700106 87700417 -57888871 + AluY SINE Alu 1 311 0 864 192 158 42 chr10 87700417 87700555 -57888733 - L1M4 LINE L1 -1233 4913 4730 1069 72 0 0 chr10 87700566 87700704 -57888584 + Alu SINE Alu 173 310 0 726 227 31 0 chr10 87700711 87700905 -57888383 - L1M4 LINE L1 -1412 4734 4535 822 206 172 0 chr10 87700905 87701085 -57888203 - AluJb SINE Alu 0 312 102 1872 158 0 16 chr10 87701259 87701563 -57887725 - AluJo SINE Alu -13 299 1 1932 142 14 10 chr10 87701930 87702225 -57887063 - AluSx SINE Alu -16 296 1 304 270 147 44 chr10 87702668 87702794 -57886494 + MIR SINE MIR 6 118 -144 2439 63 0 41 chr10 87702794 87703113 -57886175 + AluY SINE Alu 1 306 -5 304 270 147 44 chr10 87703113 87703190 -57886098 + MIR SINE MIR 118 230 -32 193 438 19 19 chr10 87703948 87704110 -57885178 + L2 LINE L2 3104 3265 -7 540 322 60 5 chr10 87704166 87704365 -57884923 - MIR SINE MIR -5 257 48 386 294 28 7 chr10 87705026 87705173 -57884115 - MIR SINE MIR -63 145 3 2038 128 0 19 chr10 87705228 87705540 -57883748 - AluSx SINE Alu -6 306 1 245 265 213 44 chr10 87705651 87705787 -57883501 + MIR SINE MIR 21 179 -83 1040 297 50 52 chr10 87705885 87706089 -57883199 + L1MCb LINE L1 1 204 -5841 1184 197 203 3 chr10 87706089 87706394 -57882894 + MER47A DNA MER2_type 1 366 0 1040 297 50 52 chr10 87706394 87706486 -57882802 + L1MCb LINE L1 204 295 -5750 2419 54 0 0 chr10 87706486 87706783 -57882505 - AluY SINE Alu -14 297 1 1040 297 50 52 chr10 87706783 87707007 -57882281 + L1MCb LINE L1 295 521 -5524 246 217 22 0 chr10 87707049 87707095 -57882193 + L1MCb LINE L1 517 563 -5482 328 152 0 170 chr10 87707212 87707324 -57881964 + L1M4 LINE L1 3663 3755 -2391 1359 230 75 37 chr10 87707329 87707794 -57881494 + L1M4 LINE L1 4052 4534 -1612 1701 169 7 0 chr10 87707802 87708097 -57881191 + AluJo SINE Alu 1 297 -15 557 215 0 0 chr10 87708098 87708205 -57881083 + FLAM_C SINE Alu 2 108 -35 1755 140 0 0 chr10 87708315 87708579 -57880709 + AluSx SINE Alu 26 289 -23 22 70 0 0 chr10 87708579 87708622 -57880666 + AT_rich Low_complexity Low_complexity 1 43 0 2264 88 10 0 chr10 87708626 87708931 -57880357 + AluSg SINE Alu 1 308 -2 445 272 154 42 chr10 87709697 87709888 -57879400 - L2 LINE L2 -75 3197 3029 1990 94 4 0 chr10 87709888 87710197 -57879091 - AluSx SINE Alu 0 316 7 445 272 154 42 chr10 87710197 87710318 -57878970 - L2 LINE L2 -243 3029 2853 2507 58 0 3 chr10 87711290 87711601 -57877687 + AluY SINE Alu 1 310 -1 21 36 0 0 chr10 87711614 87711642 -57877646 + AT_rich Low_complexity Low_complexity 1 28 0 1862 123 70 0 chr10 87712255 87712539 -57876749 - AluSg SINE Alu -6 304 1 2647 206 29 41 chr10 87712590 87712960 -57876328 + L1ME1 LINE L1 5520 5880 -286 2113 114 0 23 chr10 87712960 87713268 -57876020 + AluSx SINE Alu 2 302 -10 2647 206 29 41 chr10 87713268 87713551 -57875737 + L1ME1 LINE L1 5880 6165 -1 423 213 45 64 chr10 87713656 87713820 -57875468 - L1MA9 LINE L1 0 6291 6135 2284 64 0 10 chr10 87713827 87714124 -57875164 + AluY SINE Alu 6 299 -12 1295 79 0 6 chr10 87714124 87714302 -57874986 + AluY SINE Alu 133 309 -2 1031 231 25 56 chr10 87714306 87714627 -57874661 - L1MA9 LINE L1 -172 6140 5830 1454 254 90 15 chr10 87714831 87715273 -57874015 - MER77 LTR ERV1 -4 601 160 734 267 134 65 chr10 87715332 87715741 -57873547 - MLT1L LTR MaLR -34 581 123 3738 107 0 4 chr10 87715741 87716254 -57873034 + MER9 LTR ERVK 1 511 0 734 267 134 65 chr10 87716254 87716387 -57872901 - MLT1L LTR MaLR -492 123 1 1034 118 0 0 chr10 87716480 87716632 -57872656 + AluSg/x SINE Alu 154 305 -5 306 73 0 0 chr10 87716632 87716673 -57872615 + (TA)n Simple_repeat Simple_repeat 2 42 0 834 203 86 5 chr10 87716966 87717153 -57872135 + MIR SINE MIR 34 235 -27 27 62 0 0 chr10 87717154 87717202 -57872086 + AT_rich Low_complexity Low_complexity 1 48 0 828 116 0 8 chr10 87717244 87717365 -57871923 + AluJo/FLAM SINE Alu 11 130 -182 1706 162 0 35 chr10 87717368 87717683 -57871605 + AluJo SINE Alu 1 304 -8 279 286 69 20 chr10 87717849 87718052 -57871236 - L1M4 LINE L1 -2145 4001 3789 2220 226 54 70 chr10 87718070 87718296 -57870992 + HsTC2 DNA Tc2 15 243 -1655 728 178 0 0 chr10 87718296 87718414 -57870874 + AluJo/FLAM SINE Alu 1 118 -184 2281 62 3 31 chr10 87718414 87718734 -57870554 - AluY SINE Alu 0 311 1 2220 226 54 70 chr10 87718734 87718745 -57870543 + HsTC2 DNA Tc2 242 252 -1646 2359 65 0 3 chr10 87718745 87719054 -57870234 - AluY SINE Alu -3 308 1 2220 226 54 70 chr10 87719054 87719485 -57869803 + HsTC2 DNA Tc2 252 674 -1224 652 203 14 134 chr10 87719483 87719730 -57869558 + HsTC2 DNA Tc2 1328 1719 -179 * 249 274 51 23 chr10 87719856 87720028 -57869260 + MLT1L LTR MaLR 371 611 -4 331 210 22 101 chr10 87721371 87721509 -57867779 - L1MC4 LINE L1 -1311 6731 6605 2245 94 0 0 chr10 87721976 87722274 -57867014 - AluSx SINE Alu -14 298 1 1490 146 56 31 chr10 87722331 87722619 -57866669 - AluJb SINE Alu -12 300 6 187 300 213 33 chr10 87724483 87724633 -57864655 - MIR SINE MIR -13 249 73 213 291 213 3 chr10 87725328 87725465 -57863823 - MIR SINE MIR -61 147 18 485 215 6 120 chr10 87726215 87726373 -57862915 + MIR3 SINE MIR 6 145 -63 337 368 33 22 chr10 87726851 87727033 -57862255 - MIR3 SINE MIR -6 202 19 381 294 66 103 chr10 87727139 87727489 -57861799 - L2 LINE L2 0 3272 2936 381 349 61 13 chr10 87727600 87727829 -57861459 - L2 LINE L2 -617 2697 2458 203 403 72 0 chr10 87727888 87728027 -57861261 - L2 LINE L2 -940 2374 2226 302 302 94 50 chr10 87729350 87729509 -57859779 + MIR SINE MIR 27 192 -70 258 268 0 61 chr10 87730994 87731076 -57858212 - L2 LINE L2 -4 3268 3192 258 280 215 0 chr10 87731460 87731567 -57857721 - MER5A DNA MER1_type 0 189 60 2190 183 36 87 chr10 87731649 87732298 -57856990 - LTR6A LTR ERV1 0 564 1 1361 173 184 0 chr10 87732465 87732720 -57856568 - AluJo SINE Alu 0 302 1 1684 157 63 6 chr10 87732746 87733077 -57856211 - L1PB4 LINE L1 0 6156 5807 2182 114 0 0 chr10 87733690 87733996 -57855292 - AluSc SINE Alu -3 306 1 2515 54 3 3 chr10 87734007 87734320 -57854968 - AluSp SINE Alu 0 313 1 318 207 0 0 chr10 87736272 87736330 -57852958 - MER103 DNA DNA -105 61 4 533 247 37 58 chr10 87736421 87736611 -57852677 - MIR SINE MIR 0 262 77 421 282 32 16 chr10 87737936 87738087 -57851201 - MIR3 SINE MIR -2 206 56 209 176 78 128 chr10 87738350 87738452 -57850836 - MIR SINE MIR -67 195 99 1022 196 152 5 chr10 87738474 87738698 -57850590 - MLT1D LTR MaLR 0 505 249 1624 141 40 50 chr10 87739000 87739297 -57849991 + AluJo SINE Alu 1 294 -18 1869 110 20 47 chr10 87739297 87739597 -57849691 + AluSx SINE Alu 1 292 -20 213 339 73 18 chr10 87740013 87740122 -57849166 - L2 LINE L2 -22 3291 3177 1817 162 48 6 chr10 87740913 87741264 -57848024 + MER47A DNA MER2_type 1 366 0 2030 140 3 0 chr10 87741575 87741875 -57847413 + AluSx SINE Alu 1 301 -11 300 312 65 13 chr10 87742405 87742564 -57846724 - MIR SINE MIR -58 204 28 250 286 14 0 chr10 87742570 87742640 -57846648 - MIR SINE MIR -122 86 16 1814 124 3 37 chr10 87743090 87743388 -57845900 + AluSx SINE Alu 1 288 -24 1674 101 155 4 chr10 87743617 87743875 -57845413 - AluY SINE Alu -4 297 1 356 268 81 61 chr10 87744033 87744231 -57845057 - MIR SINE MIR -33 229 28 631 144 0 29 chr10 87744234 87744407 -57844881 + (CCCTG)n Simple_repeat Simple_repeat 3 170 0 2275 103 0 3 chr10 87744803 87745115 -57844173 - AluSq SINE Alu -2 311 1 1247 147 5 5 chr10 87745166 87745377 -57843911 + AluJo SINE Alu 90 300 -12 282 224 0 0 chr10 87745531 87745588 -57843700 - L1ME4a LINE L1 -236 5885 5826 1963 121 0 37 chr10 87745588 87745911 -57843377 - AluSx SINE Alu -1 311 1 282 224 0 0 chr10 87745911 87745938 -57843350 - L1ME4a LINE L1 -294 5827 5801 2027 128 13 0 chr10 87747072 87747370 -57841918 + AluSx SINE Alu 1 302 -10 2168 102 0 3 chr10 87748563 87748858 -57840430 + AluSq SINE Alu 1 294 -19 2406 200 63 73 chr10 87749211 87749645 -57839643 - MER67B LTR ERV1 -14 647 221 2096 107 0 0 chr10 87749645 87749935 -57839353 + AluSx SINE Alu 1 290 -22 2406 200 63 73 chr10 87749935 87750154 -57839134 - MER67B LTR ERV1 -440 221 1 1094 185 130 30 chr10 87750193 87750463 -57838825 - AluJo SINE Alu -5 297 1 407 116 14 29 chr10 87750467 87750536 -57838752 - MER5A DNA MER1_type -118 71 4 615 207 71 41 chr10 87750720 87750829 -57838459 + MER5B DNA MER1_type 3 120 -58 1595 170 10 13 chr10 87750829 87751129 -57838159 - AluJo SINE Alu -13 299 1 615 207 71 41 chr10 87751129 87751188 -57838100 + MER5B DNA MER1_type 120 176 -2 3878 129 28 7 chr10 87751281 87751895 -57837393 + MER39B LTR ERV1 22 648 -5 1056 213 116 9 chr10 87752556 87752876 -57836412 - L2 LINE L2 -506 2808 2455 282 261 31 0 chr10 87752885 87752950 -57836338 - L2 LINE L2 -816 2498 2432 680 204 0 23 chr10 87753266 87753398 -57835890 + MER5B DNA MER1_type 50 178 0 1608 163 92 57 chr10 87753569 87753992 -57835296 + L1MC5 LINE L1 6693 7130 -831 2362 119 0 0 chr10 87754232 87754544 -57834744 + AluSx SINE Alu 1 312 0 2128 126 71 96 chr10 87754546 87754862 -57834426 + L1MA8 LINE L1 5498 5820 -471 767 192 15 0 chr10 87754862 87754992 -57834296 + FLAM_A SINE Alu 2 133 0 2128 126 71 96 chr10 87754992 87755132 -57834156 + L1MA8 LINE L1 5820 5944 -347 2330 91 3 41 chr10 87755132 87755451 -57833837 + AluSx SINE Alu 1 307 -5 2128 126 71 96 chr10 87755451 87755484 -57833804 + L1MA8 LINE L1 5944 5976 -315 4418 127 6 62 chr10 87755484 87755903 -57833385 + MER70A-int LTR ERVL 4275 4631 -392 2346 106 0 25 chr10 87755903 87756224 -57833064 + AluSq SINE Alu 1 313 0 4418 127 6 62 chr10 87756224 87756592 -57832696 + MER70A-int LTR ERVL 4631 5018 -5 1104 127 17 0 chr10 87756602 87756775 -57832513 + MER70A LTR ERVL 1 176 -296 2066 109 11 0 chr10 87756775 87757049 -57832239 + AluSx SINE Alu 1 277 -35 183 42 0 0 chr10 87757053 87757077 -57832211 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 285 0 0 0 chr10 87757863 87757896 -57831392 + MER72 LTR ERV1 688 720 -2 342 242 117 82 chr10 87758685 87758916 -57830372 - LTR16A LTR ERVL -99 351 113 213 39 0 0 chr10 87759508 87759534 -57829754 + (CA)n Simple_repeat Simple_repeat 2 27 0 184 293 13 53 chr10 87760117 87760192 -57829096 - MIR SINE MIR -188 74 3 221 293 149 39 chr10 87760750 87760931 -57828357 + L2 LINE L2 622 822 -2492 325 324 176 33 chr10 87760970 87761668 -57827620 + L2 LINE L2 940 1537 -1777 841 156 0 15 chr10 87761668 87761803 -57827485 - FLAM_C SINE Alu 0 133 1 325 324 176 33 chr10 87761803 87762220 -57827068 + L2 LINE L2 1537 2215 -1099 604 252 102 37 chr10 87762281 87762575 -57826713 + MLT1J LTR MaLR 107 419 -92 261 191 0 36 chr10 87762659 87762743 -57826545 + CT-rich Low_complexity Low_complexity 3 83 0 913 138 0 36 chr10 87762750 87762888 -57826400 - FLAM_C SINE Alu 0 133 1 190 336 239 29 chr10 87762909 87763361 -57825927 + L2 LINE L2 2207 2753 -561 260 297 0 14 chr10 87763458 87763532 -57825756 + MLT1K LTR MaLR 142 214 -374 2208 131 0 6 chr10 87763620 87763932 -57825356 - AluSx SINE Alu -2 310 1 252 233 55 0 chr10 87764130 87764203 -57825085 + MLT1K LTR MaLR 509 585 -3 440 368 29 0 chr10 87764261 87764435 -57824853 - MIR SINE MIR -34 228 50 21 0 0 0 chr10 87764816 87764837 -57824451 + AT_rich Low_complexity Low_complexity 1 21 0 593 117 0 0 chr10 87764923 87765000 -57824288 + AluS SINE Alu 2 78 -232 1647 129 48 10 chr10 87765646 87765957 -57823331 - THE1C LTR MaLR 0 375 53 1516 225 3 7 chr10 87766335 87766633 -57822655 + AluJb SINE Alu 1 297 -15 411 189 0 0 chr10 87766633 87766707 -57822581 + L1ME LINE L1 5495 5568 -598 400 289 0 0 chr10 87766752 87766856 -57822432 - FLAM_C SINE Alu -38 105 2 211 297 12 42 chr10 87767388 87767553 -57821735 + CT-rich Low_complexity Low_complexity 4 163 0 1047 154 6 0 chr10 87767765 87767927 -57821361 + FRAM SINE Alu 2 164 -12 363 314 194 0 chr10 87767986 87768177 -57821111 - MIR SINE MIR -32 230 3 2216 206 21 8 chr10 87768962 87769433 -57819855 + L1MA5 LINE L1 5470 5946 -354 1176 236 27 8 chr10 87769434 87769693 -57819595 + AluJo SINE Alu 1 264 -48 4070 98 32 11 chr10 87770393 87771016 -57818272 + SVA Other Other 224 859 -527 518 122 12 12 chr10 87771624 87771706 -57817582 - AluS SINE Alu -231 82 1 747 158 17 0 chr10 87772058 87772178 -57817110 - AluSq/x SINE Alu -182 130 9 430 295 140 47 chr10 87773349 87773565 -57815723 + MIR SINE MIR 4 236 -26 822 144 23 0 chr10 87773573 87773705 -57815583 - FRAM SINE Alu -18 158 24 2183 232 14 3 chr10 87774389 87774962 -57814326 - L1 LINE L1 -1080 5066 4488 1125 163 0 0 chr10 87774967 87775139 -57814149 - AluSp SINE Alu -6 307 136 1591 215 14 32 chr10 87775148 87775589 -57813699 - L1 LINE L1 -1662 4484 4052 1230 127 52 26 chr10 87775819 87777083 -57812205 + GSATII Satellite centromeric 1 1296 -25 242 253 13 13 chr10 87777261 87777336 -57811952 - MIR SINE MIR -80 182 108 1190 109 103 2 chr10 87778524 87779230 -57810058 + GSATII Satellite centromeric 1 776 -32 183 80 0 0 chr10 87780049 87780074 -57809214 + (A)n Simple_repeat Simple_repeat 1 25 0 180 333 105 9 chr10 87780687 87780801 -57808487 + L2 LINE L2 2734 2858 -456 243 0 0 0 chr10 87781140 87781167 -57808121 + (T)n Simple_repeat Simple_repeat 1 27 0 870 258 96 47 chr10 87782547 87782831 -57806457 - MER21B LTR ERV1 -57 806 499 1559 190 32 11 chr10 87782831 87783115 -57806173 - AluJo SINE Alu -11 301 12 870 258 96 47 chr10 87783115 87783195 -57806093 - MER21B LTR ERV1 -364 499 424 836 189 0 126 chr10 87783196 87783434 -57805854 + AluJb SINE Alu 2 209 -103 204 298 192 7 chr10 87785295 87785446 -57803842 + L2 LINE L2 2928 3106 -166 187 304 36 0 chr10 87785518 87785574 -57803714 + L2 LINE L2 3215 3272 0 370 165 44 55 chr10 87785887 87785978 -57803310 - MIR SINE MIR -62 200 111 220 186 0 119 chr10 87786497 87786556 -57802732 - MER5A DNA MER1_type -22 167 116 557 248 22 15 chr10 87786873 87787010 -57802278 - MIR SINE MIR -37 225 88 195 146 0 0 chr10 87787178 87787219 -57802069 + (CTCA)n Simple_repeat Simple_repeat 3 43 0 511 255 83 20 chr10 87787314 87787518 -57801770 - MLT1K LTR MaLR 0 588 372 286 285 70 38 chr10 87788125 87788283 -57801005 + L2 LINE L2 2854 3016 -256 1192 143 24 136 chr10 87788284 87788370 -57800918 + AluYb8 SINE Alu 36 130 -190 198 0 0 0 chr10 87788370 87788392 -57800896 + (CAA)n Simple_repeat Simple_repeat 2 23 0 1192 143 24 136 chr10 87788392 87788622 -57800666 + AluYb8 SINE Alu 130 320 0 600 256 17 28 chr10 87788622 87788802 -57800486 + MER63B DNA MER1_type 20 197 -239 702 256 62 0 chr10 87789050 87789245 -57800043 + MER63B DNA MER1_type 230 436 0 27 0 0 0 chr10 87791333 87791360 -57797928 + AT_rich Low_complexity Low_complexity 1 27 0 1300 114 126 15 chr10 87791535 87791806 -57797482 + L1MA9 LINE L1 6007 6307 -5 202 151 0 75 chr10 87791895 87791948 -57797340 + GA-rich Low_complexity Low_complexity 4 52 0 477 206 10 0 chr10 87792437 87792534 -57796754 - U6 snRNA snRNA -1 106 9 1804 81 0 0 chr10 87794817 87795038 -57794250 + AluSg/x SINE Alu 83 303 -7 246 228 0 0 chr10 87795054 87795111 -57794177 + L1ME LINE L1 5603 5659 -462 6561 37 19 1 chr10 87796066 87796980 -57792308 + L1P LINE L1 2551 3480 -2666 460 261 30 28 chr10 87798301 87798459 -57790829 + L1ME LINE L1 5500 5659 -462 22 0 0 0 chr10 87798530 87798552 -57790736 + AT_rich Low_complexity Low_complexity 1 22 0 775 231 77 16 chr10 87799954 87800201 -57789087 + AluJo SINE Alu 42 303 -9 1130 263 101 17 chr10 87800205 87800729 -57788559 - L2 LINE L2 -216 3097 2541 653 246 0 0 chr10 87800820 87800950 -57788338 + FLAM_C SINE Alu 1 130 -3 970 216 53 4 chr10 87801014 87801086 -57788202 + AluJo SINE Alu 49 116 -196 207 0 0 0 chr10 87801086 87801109 -57788179 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 970 216 53 4 chr10 87801109 87801263 -57788025 + AluJo SINE Alu 116 286 -26 25 31 0 0 chr10 87801405 87801437 -57787851 + AT_rich Low_complexity Low_complexity 1 32 0 1381 186 48 7 chr10 87801730 87802021 -57787267 - AluSg SINE Alu -7 303 1 1148 261 48 52 chr10 87804425 87805003 -57784285 - L1ME2 LINE L1 -134 6030 5455 2313 111 0 0 chr10 87805661 87805959 -57783329 + AluSc SINE Alu 1 298 -11 192 284 181 17 chr10 87806646 87806762 -57782526 + L2 LINE L2 3138 3272 0 1638 163 175 25 chr10 87807101 87807500 -57781788 + LTR1B LTR ERV1 368 826 0 3856 141 8 10 chr10 87807503 87808122 -57781166 + L1PA15 LINE L1 5544 6161 -4 230 326 57 16 chr10 87808143 87808336 -57780952 + L1ME LINE L1 5646 5846 -275 306 280 13 27 chr10 87808563 87808713 -57780575 + C-rich Low_complexity Low_complexity 4 151 0 1479 181 30 53 chr10 87809309 87809705 -57779583 - MLT2B3 LTR ERVL 0 554 183 2104 140 102 23 chr10 87809718 87810245 -57779043 + SATR1 Satellite Satellite 1 568 -121 242 310 5 38 chr10 87810474 87810658 -57778630 + T-rich Low_complexity Low_complexity 3 180 0 * 294 242 16 59 chr10 87810544 87810730 -57778558 + CT-rich Low_complexity Low_complexity 3 180 0 678 153 16 0 chr10 87810864 87810988 -57778300 + L1PB1 LINE L1 3716 3841 -2305 5622 130 20 11 chr10 87810994 87812354 -57776934 + L1PB1 LINE L1 4676 6046 -105 1626 222 86 13 chr10 87812963 87813486 -57775802 + L1M4 LINE L1 4771 5331 -815 1070 134 0 0 chr10 87813653 87813817 -57775471 + MER2 DNA MER2_type 66 229 -116 347 225 94 65 chr10 87814574 87814671 -57774617 - HAL1b LINE L1 -7 1341 1248 1830 127 4 4 chr10 87814671 87814946 -57774342 + AluSx SINE Alu 1 275 -37 336 102 0 0 chr10 87814950 87814999 -57774289 + (CA)n Simple_repeat Simple_repeat 2 50 0 347 225 94 65 chr10 87814999 87815034 -57774254 - HAL1b LINE L1 -102 1246 1200 767 152 30 8 chr10 87815061 87815193 -57774095 + MER5A DNA MER1_type 32 166 -23 698 183 0 0 chr10 87815197 87815312 -57773976 - Tigger1 DNA MER2_type 0 2418 2304 786 146 146 14 chr10 87815316 87815460 -57773828 + FRAM SINE Alu 1 160 -16 800 211 119 4 chr10 87815467 87815728 -57773560 - Tigger1 DNA MER2_type -106 2312 2022 8291 35 16 0 chr10 87815921 87816940 -57772348 - L1P LINE L1 -1504 4642 3608 209 229 0 16 chr10 87817458 87817519 -57771769 + (TTTA)n Simple_repeat Simple_repeat 1 60 0 7815 17 0 0 chr10 87817520 87818398 -57770890 - L1PA2 LINE L1 -11 6144 5267 27 0 0 0 chr10 87818921 87818948 -57770340 + AT_rich Low_complexity Low_complexity 1 27 0 1841 161 3 0 chr10 87819069 87819368 -57769920 - AluSq SINE Alu -4 309 10 23 0 0 0 chr10 87819380 87819403 -57769885 + AT_rich Low_complexity Low_complexity 1 23 0 1963 142 0 0 chr10 87819445 87819741 -57769547 - AluSx SINE Alu -16 296 1 2299 154 9 42 chr10 87819749 87820183 -57769105 - L1MC1 LINE L1 0 6333 5914 735 172 45 0 chr10 87821207 87821341 -57767947 - Tigger7 DNA MER2_type 0 2587 2448 685 144 52 39 chr10 87821347 87821500 -57767788 + MER21A LTR ERV1 747 901 -30 21 36 0 0 chr10 87821896 87821924 -57767364 + AT_rich Low_complexity Low_complexity 1 28 0 2093 115 0 0 chr10 87821973 87822277 -57767011 - AluSx SINE Alu -8 304 1 482 66 11 33 chr10 87822305 87822396 -57766892 + (TA)n Simple_repeat Simple_repeat 1 89 0 225 319 42 7 chr10 87822615 87822759 -57766529 + L1ME LINE L1 5528 5676 -445 463 270 152 24 chr10 87824141 87824246 -57765042 - L1MC4 LINE L1 0 8042 7952 351 0 0 0 chr10 87824246 87824285 -57765003 + (CA)n Simple_repeat Simple_repeat 2 40 0 463 270 152 24 chr10 87824285 87824426 -57764862 - L1MC4 LINE L1 -90 7952 7749 2098 105 0 23 chr10 87824426 87824730 -57764558 + AluY SINE Alu 1 297 -14 463 270 152 24 chr10 87824730 87824778 -57764510 - L1MC4 LINE L1 -293 7749 7709 924 144 0 24 chr10 87824785 87824952 -57764336 - AluSg/x SINE Alu -17 295 133 3303 226 120 10 chr10 87825701 87826141 -57763147 + L1MC4 LINE L1 6563 6953 -1089 1721 137 3 27 chr10 87826141 87826440 -57762848 + AluSx SINE Alu 1 292 -20 3303 226 120 10 chr10 87826440 87827004 -57762284 + L1MC4 LINE L1 6953 7678 -364 901 266 89 28 chr10 87826995 87827712 -57761576 + L1M4 LINE L1 2808 3568 -2578 * 1260 222 80 0 chr10 87827714 87828052 -57761236 + MER47A DNA MER2_type 1 365 -1 614 163 284 7 chr10 87828361 87828502 -57760786 + AluJb SINE Alu 121 300 -12 190 250 52 31 chr10 87828937 87829033 -57760255 + L2 LINE L2 1607 1704 -1610 1094 264 137 13 chr10 87829053 87829500 -57759788 - MLT1J LTR MaLR -7 504 3 1643 292 179 16 chr10 87829595 87830845 -57758443 + L2 LINE L2 1851 3312 -1 1436 161 68 29 chr10 87830927 87831207 -57758081 + AluJo SINE Alu 1 291 -21 21 57 0 0 chr10 87831973 87832008 -57757280 + GC_rich Low_complexity Low_complexity 1 35 0 24 85 0 0 chr10 87832072 87832131 -57757157 + GC_rich Low_complexity Low_complexity 1 59 0 545 148 0 0 chr10 87833338 87833419 -57755869 - AluJ/FLAM SINE Alu -225 87 7 447 242 30 38 chr10 87834276 87834327 -57754961 - MIR SINE MIR -48 214 164 2224 110 3 0 chr10 87834327 87834637 -57754651 + AluSq SINE Alu 1 311 -2 447 242 30 38 chr10 87834637 87834717 -57754571 - MIR SINE MIR -98 164 84 2263 88 0 10 chr10 87834729 87835035 -57754253 - AluSx SINE Alu -9 303 1 681 259 119 10 chr10 87835317 87835518 -57753770 - MLT1I LTR MaLR 0 409 187 209 221 26 104 chr10 87836546 87836623 -57752665 + MIR SINE MIR 116 186 -76 211 139 0 23 chr10 87836752 87836795 -57752493 + (GGTTG)n Simple_repeat Simple_repeat 2 43 0 1638 183 90 50 chr10 87837576 87838041 -57751247 - MER31A LTR ERV1 -1 484 1 1343 156 0 4 chr10 87839461 87839692 -57749596 - AluJo SINE Alu -14 298 69 279 79 0 0 chr10 87839894 87839932 -57749356 + (GGGTG)n Simple_repeat Simple_repeat 5 42 0 504 293 110 17 chr10 87841006 87841296 -57747992 - L1MC4a LINE L1 -1871 5937 5621 1508 197 0 23 chr10 87843801 87844106 -57745182 - AluJo SINE Alu -14 298 1 1523 218 35 14 chr10 87844211 87844559 -57744729 - MER4D LTR ERV1 0 903 549 1647 146 21 14 chr10 87844593 87844881 -57744407 - MER49 LTR ERV1 -633 290 1 329 198 19 113 chr10 87846110 87846216 -57743072 + MER5A DNA MER1_type 10 105 -84 591 168 181 20 chr10 87846256 87846405 -57742883 - AluJb SINE Alu -3 309 137 725 71 0 0 chr10 87847513 87847611 -57741677 + MER2 DNA MER2_type 93 190 -155 1905 131 24 0 chr10 87847635 87847925 -57741363 - AluSx SINE Alu -15 297 1 333 222 14 28 chr10 87847925 87847997 -57741291 + MER2 DNA MER2_type 273 343 -2 1305 142 166 8 chr10 87849442 87849689 -57739599 + AluJo SINE Alu 2 287 -15 2239 206 41 50 chr10 87849792 87850407 -57738881 - L1MC4 LINE L1 -492 7550 6942 29 28 0 0 chr10 87851232 87851268 -57738020 + AT_rich Low_complexity Low_complexity 1 36 0 200 59 29 0 chr10 87852026 87852060 -57737228 + (GGGGA)n Simple_repeat Simple_repeat 3 37 0 1137 204 5 0 chr10 87852859 87853070 -57736218 + AluJb SINE Alu 1 212 -100 2105 113 0 0 chr10 87853166 87853459 -57735829 - AluSg1 SINE Alu -16 293 1 1143 180 130 62 chr10 87853476 87853664 -57735624 + MER2 DNA MER2_type 1 175 -170 1709 159 10 3 chr10 87853664 87853954 -57735334 + AluJb SINE Alu 1 292 -20 1143 180 130 62 chr10 87853954 87853984 -57735304 + MER2 DNA MER2_type 175 202 -143 2354 56 0 0 chr10 87853984 87854271 -57735017 - AluY SINE Alu -6 305 19 1143 180 130 62 chr10 87854271 87854298 -57734990 + MER2 DNA MER2_type 202 226 -119 183 42 0 0 chr10 87854298 87854322 -57734966 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1143 180 130 62 chr10 87854322 87854397 -57734891 + MER2 DNA MER2_type 226 345 0 1694 187 113 44 chr10 87854403 87854853 -57734435 - MLT1E2 LTR MaLR -71 555 75 482 275 42 12 chr10 87854950 87855117 -57734171 + HAL1 LINE L1 3 174 -2333 965 268 118 18 chr10 87855383 87855722 -57733566 + HAL1 LINE L1 579 951 -1556 1395 267 71 21 chr10 87855727 87856334 -57732954 + HAL1 LINE L1 989 1625 -882 908 105 0 0 chr10 87856335 87856449 -57732839 + AluSx SINE Alu 22 135 -178 10810 22 0 0 chr10 87856449 87857939 -57731349 - L1PA3 LINE L1 -584 5571 4082 4748 38 0 0 chr10 87857939 87858518 -57730770 + L1PA3 LINE L1 5573 6155 0 1082 184 5 0 chr10 87858518 87858708 -57730580 + AluSx SINE Alu 121 311 -1 677 297 110 28 chr10 87858827 87859255 -57730033 + HAL1 LINE L1 1860 2322 -185 924 127 49 0 chr10 87859255 87859397 -57729891 - AluSp SINE Alu -68 245 97 1937 74 0 0 chr10 87859398 87859627 -57729661 - AluY SINE Alu -82 229 1 344 276 92 25 chr10 87859647 87859810 -57729478 + HAL1 LINE L1 2334 2507 0 2358 95 0 3 chr10 87859866 87860162 -57729126 - AluSx SINE Alu -17 295 1 263 223 43 64 chr10 87860175 87860269 -57729019 - MER112 DNA MER1_type -168 92 1 2499 87 3 0 chr10 87860297 87860609 -57728679 - AluSq SINE Alu 0 313 1 1850 154 10 7 chr10 87861537 87861830 -57727458 + AluSx SINE Alu 1 294 -18 1273 158 31 14 chr10 87861886 87862108 -57727180 - AluJb SINE Alu 0 312 87 663 132 0 97 chr10 87864517 87864661 -57724627 + FLAM_C SINE Alu 2 131 -12 248 275 125 8 chr10 87864906 87865026 -57724262 - MER5A DNA MER1_type -37 152 19 329 316 121 15 chr10 87866352 87866558 -57722730 + MIR SINE MIR 20 247 -15 264 311 53 45 chr10 87866927 87867059 -57722229 - L2 LINE L2 -2 3270 3138 634 294 74 16 chr10 87867226 87867723 -57721565 - L2 LINE L2 -25 3247 2709 810 296 120 35 chr10 87867899 87868442 -57720846 - L2 LINE L2 -1117 2197 1609 2631 41 0 0 chr10 87870111 87870404 -57718884 + AluY SINE Alu 1 293 -18 3372 158 26 14 chr10 87870753 87871373 -57717915 + L1MB3 LINE L1 5415 6041 -142 22 0 0 0 chr10 87871705 87871727 -57717561 + AT_rich Low_complexity Low_complexity 1 22 0 361 261 69 46 chr10 87871906 87872036 -57717252 + MER94 DNA DNA 1 133 -1 293 323 42 0 chr10 87872158 87872254 -57717034 - L3 LINE CR1 -134 1443 1344 402 225 59 113 chr10 87872667 87872889 -57716399 - L1ME LINE L1 -367 5754 5545 429 70 0 0 chr10 87872912 87872969 -57716319 + (TG)n Simple_repeat Simple_repeat 2 58 0 228 291 44 32 chr10 87873327 87873343 -57715945 - L1MA10 LINE L1 0 6334 6319 573 265 57 28 chr10 87873343 87873554 -57715734 - L1ME1 LINE L1 -4 6162 5946 572 194 117 129 chr10 87873581 87873658 -57715630 - L1MEc LINE L1 -2947 3268 3192 401 136 57 0 chr10 87873658 87873746 -57715542 - L1MB3 LINE L1 -1 6182 6090 572 194 117 129 chr10 87873746 87873916 -57715372 - L1MEc LINE L1 -3023 3192 3024 740 296 107 10 chr10 87873983 87874598 -57714690 - L1MEc LINE L1 -4932 1464 790 458 229 57 7 chr10 87874622 87874762 -57714526 - L1ME1 LINE L1 -260 5910 5764 1216 187 24 0 chr10 87874926 87875135 -57714153 + MER58A DNA MER1_type 11 224 0 191 257 148 20 chr10 87875489 87875590 -57713698 + MIR3 SINE MIR 79 192 -16 296 216 155 35 chr10 87875901 87876017 -57713271 - MIR SINE MIR -63 145 16 237 359 99 6 chr10 87876304 87876485 -57712803 - MIR SINE MIR -18 244 47 374 344 0 16 chr10 87877164 87877289 -57711999 + MIR3 SINE MIR 37 159 -49 192 326 0 65 chr10 87877653 87877745 -57711543 + MIR SINE MIR 61 146 -62 2309 90 3 66 chr10 87877893 87878227 -57711061 - AluSp SINE Alu 0 313 1 1093 164 79 86 chr10 87878686 87878990 -57710298 - AluJo SINE Alu 0 302 1 922 305 149 27 chr10 87879450 87880693 -57708595 - L2 LINE L2 -28 3285 1883 318 352 19 0 chr10 87880876 87880981 -57708307 + L2 LINE L2 3207 3313 0 210 304 184 8 chr10 87880973 87881098 -57708190 + MIR3 SINE MIR 7 153 -55 * 2208 158 150 15 chr10 87883406 87883572 -57705716 - LTR24B LTR ERV1 -6 570 428 1949 127 14 4 chr10 87883572 87883848 -57705440 - AluSx SINE Alu -31 281 3 2208 158 150 15 chr10 87883848 87884148 -57705140 - LTR24B LTR ERV1 -148 428 41 506 204 130 43 chr10 87884181 87884343 -57704945 - MER3 DNA MER1_type -80 129 1 2614 54 0 10 chr10 87885681 87885995 -57703293 - AluY SINE Alu 0 311 1 239 308 41 34 chr10 87886312 87886458 -57702830 + MIR SINE MIR 79 225 -37 2494 80 0 6 chr10 87888170 87888483 -57700805 + AluY SINE Alu 1 311 0 674 96 10 0 chr10 87889289 87889393 -57699895 + (TC)n Simple_repeat Simple_repeat 1 105 0 581 246 0 8 chr10 87889394 87889528 -57699760 - FLAM_A SINE Alu 0 133 1 1337 125 0 0 chr10 87890260 87890444 -57698844 - AluSg/x SINE Alu 0 312 129 261 0 0 0 chr10 87890450 87890479 -57698809 + (TTG)n Simple_repeat Simple_repeat 2 30 0 1873 149 3 14 chr10 87890482 87890777 -57698511 - AluJb SINE Alu -20 292 1 1295 203 125 3 chr10 87891141 87891437 -57697851 + MER58B DNA MER1_type 10 341 0 2135 173 6 3 chr10 87892319 87892683 -57696605 + MLT1A1 LTR MaLR 1 365 0 1825 151 17 82 chr10 87892732 87893149 -57696139 - MLT1B LTR MaLR 0 390 1 1569 67 72 5 chr10 87899302 87899510 -57689778 + AluY SINE Alu 82 303 -8 2217 120 10 0 chr10 87899808 87900109 -57689179 + AluSx SINE Alu 1 304 -8 505 228 68 25 chr10 87900447 87900609 -57688679 - MLT1K LTR MaLR -22 566 398 1991 18 0 9 chr10 87900987 87901207 -57688081 - AluY SINE Alu -11 300 83 201 245 0 20 chr10 87901302 87901351 -57687937 + MIR SINE MIR 158 205 -57 263 254 79 53 chr10 87902353 87902542 -57686746 + L3 LINE CR1 1381 1574 -3 850 229 117 11 chr10 87902554 87902912 -57686376 - LTR37A LTR ERV1 0 426 31 2335 114 0 0 chr10 87902912 87903220 -57686068 - AluSq SINE Alu -5 308 1 284 277 66 1 chr10 87904446 87904550 -57684738 - MIR SINE MIR -67 141 37 402 181 40 114 chr10 87904768 87904827 -57684461 + MER5A DNA MER1_type 22 84 -105 2275 113 0 3 chr10 87904827 87905127 -57684161 + AluSq SINE Alu 1 299 -14 402 181 40 114 chr10 87905127 87905216 -57684072 + MER5A DNA MER1_type 84 159 -30 423 277 175 48 chr10 87905228 87905296 -57683992 - MLT1J2 LTR MaLR -6 444 386 2507 85 0 0 chr10 87905296 87905603 -57683685 + AluY SINE Alu 1 307 -4 423 277 175 48 chr10 87905603 87905928 -57683360 - MLT1J2 LTR MaLR -64 386 1 371 253 180 0 chr10 87906328 87906458 -57682830 + MIR SINE MIR 41 192 -70 1954 99 107 0 chr10 87907532 87907804 -57681484 - AluSg SINE Alu -9 301 1 28 61 0 0 chr10 87908396 87908445 -57680843 + AT_rich Low_complexity Low_complexity 1 49 0 965 214 173 7 chr10 87909406 87909830 -57679458 - MLT1F1 LTR MaLR -2 565 1 336 270 69 38 chr10 87909933 87910092 -57679196 - L1 LINE L1 -1666 4480 4317 268 40 120 0 chr10 87910854 87910904 -57678384 + CT-rich Low_complexity Low_complexity 6 61 0 287 333 6 23 chr10 87910963 87911134 -57678154 + GA-rich Low_complexity Low_complexity 2 169 0 265 316 13 0 chr10 87911115 87911194 -57678094 + G-rich Low_complexity Low_complexity 1 80 0 * 355 320 10 22 chr10 87911227 87911419 -57677869 + GA-rich Low_complexity Low_complexity 1 189 0 1644 150 4 4 chr10 87911721 87911987 -57677301 - AluJb SINE Alu -12 300 35 2438 57 0 0 chr10 87912069 87912370 -57676918 - AluY SINE Alu -10 301 1 24 0 0 0 chr10 87912375 87912399 -57676889 + AT_rich Low_complexity Low_complexity 1 24 0 1539 164 0 69 chr10 87912456 87912773 -57676515 - AluJo SINE Alu -17 295 1 252 0 0 0 chr10 87912777 87912805 -57676483 + (T)n Simple_repeat Simple_repeat 1 28 0 3246 199 156 8 chr10 87912843 87913620 -57675668 + Charlie1a DNA MER1_type 3 894 -561 758 140 53 20 chr10 87913633 87913783 -57675505 - L1MD3 LINE L1 0 7995 7841 1516 164 50 25 chr10 87913783 87914100 -57675188 + Charlie1a DNA MER1_type 881 1205 -250 315 0 0 0 chr10 87914112 87914147 -57675141 + (CA)n Simple_repeat Simple_repeat 2 36 0 4208 127 15 25 chr10 87914209 87914364 -57674924 - L1MA8 LINE L1 -346 5945 5790 1171 178 5 5 chr10 87914364 87914572 -57674716 - MER6B DNA MER2_type -1 209 2 4208 127 15 25 chr10 87914572 87914973 -57674315 - L1MA8 LINE L1 -501 5790 5397 2749 16 0 0 chr10 87914973 87915284 -57674004 - AluYa5 SINE Alu 0 311 1 4208 127 15 25 chr10 87915284 87915635 -57673653 - L1MA8 LINE L1 -894 5397 5044 721 186 79 9 chr10 87915644 87915859 -57673429 + Charlie1a DNA MER1_type 1221 1450 -5 482 222 20 59 chr10 87915827 87915980 -57673308 + MER105 DNA DNA 13 159 -45 * 236 238 0 0 chr10 87915981 87916023 -57673265 - MER105 DNA DNA -162 42 1 218 292 56 14 chr10 87916035 87916107 -57673181 + MIR SINE MIR 188 262 0 367 292 5 19 chr10 87916153 87916362 -57672926 - L1M4 LINE L1 -917 5229 5024 1624 251 99 9 chr10 87916388 87916915 -57672373 + L2 LINE L2 1875 2448 -866 595 57 0 90 chr10 87916916 87916927 -57672361 - L1MA3 LINE L1 -239 6066 6056 2825 115 38 0 chr10 87916927 87917345 -57671943 - MER57B LTR ERV1 0 434 1 595 57 0 90 chr10 87917345 87917455 -57671833 - L1MA3 LINE L1 -249 6056 5956 911 163 0 38 chr10 87917460 87917644 -57671644 - FRAM SINE Alu 0 176 1 551 276 83 93 chr10 87917673 87917892 -57671396 - MLT1L LTR MaLR -77 538 318 2514 45 0 6 chr10 87917892 87918204 -57671084 + AluY SINE Alu 1 310 -1 551 276 83 93 chr10 87918204 87918379 -57670909 - MLT1L LTR MaLR -297 318 148 2148 119 0 0 chr10 87918379 87918681 -57670607 - AluSx SINE Alu -10 302 1 551 276 83 93 chr10 87918681 87918824 -57670464 - MLT1L LTR MaLR -467 148 5 278 315 47 60 chr10 87919076 87919225 -57670063 - MLT1J2 LTR MaLR -37 413 267 539 232 30 26 chr10 87919231 87919427 -57669861 - MLT1J1 LTR MaLR -255 256 21 526 97 0 0 chr10 87920177 87920249 -57669039 - AluJ/FRAM SINE Alu -16 296 225 350 287 105 14 chr10 87920506 87920649 -57668639 - LTR16B LTR ERVL -308 156 1 336 251 210 26 chr10 87921164 87921405 -57667883 - MLT1I LTR MaLR -5 445 136 2523 211 30 28 chr10 87921439 87921975 -57667313 - MER87 LTR ERV1 0 541 5 1109 102 0 0 chr10 87922461 87922608 -57666680 - AluSq/x SINE Alu -166 147 1 432 269 75 60 chr10 87922851 87922964 -57666324 - L1ME LINE L1 -362 5759 5649 1827 136 3 3 chr10 87922964 87923258 -57666030 - AluJo SINE Alu -13 299 6 432 269 75 60 chr10 87923258 87923412 -57665876 - L1ME LINE L1 -472 5649 5488 469 250 15 128 chr10 87923787 87923851 -57665437 - MIR3 SINE MIR -5 203 133 2561 45 3 0 chr10 87923851 87924161 -57665127 - AluY SINE Alu 0 311 1 469 250 15 128 chr10 87924161 87924292 -57664996 - MIR3 SINE MIR -75 133 30 689 189 220 31 chr10 87924404 87924595 -57664693 - MER67B LTR ERV1 -434 227 1 189 74 0 0 chr10 87924685 87924712 -57664576 + (TCCCC)n Simple_repeat Simple_repeat 1 27 0 2168 105 0 0 chr10 87924712 87925007 -57664281 - AluSg SINE Alu -15 295 1 378 0 0 0 chr10 87925035 87925077 -57664211 + (TA)n Simple_repeat Simple_repeat 2 43 0 2170 47 57 17 chr10 87925077 87925375 -57663913 - AluY SINE Alu -1 310 1 405 314 48 54 chr10 87925603 87926103 -57663185 - L1ME LINE L1 -1172 4974 4478 1877 155 3 0 chr10 87926224 87926520 -57662768 - AluJb SINE Alu -10 302 6 186 43 0 0 chr10 87926779 87926802 -57662486 + (TTAA)n Simple_repeat Simple_repeat 4 26 0 2219 101 0 0 chr10 87926802 87927090 -57662198 - AluSq SINE Alu -22 291 1 368 234 16 8 chr10 87927159 87927283 -57662005 - L1MC4 LINE L1 -1 8041 7917 735 174 20 34 chr10 87927423 87927572 -57661716 - MER58B DNA MER1_type 0 341 195 5911 67 20 15 chr10 87927736 87928692 -57660596 - SVA Other Other -520 866 1 239 285 16 16 chr10 87928859 87928982 -57660306 + G-rich Low_complexity Low_complexity 3 125 0 201 364 0 30 chr10 87929150 87929282 -57660006 + GA-rich Low_complexity Low_complexity 5 132 0 6099 28 6 7 chr10 87929295 87930001 -57659287 + SVA Other Other 677 1381 -5 210 405 34 0 chr10 87931527 87931616 -57657672 + MIR SINE MIR 58 149 -59 293 304 104 37 chr10 87934918 87935053 -57654235 - MIR3 SINE MIR -57 151 8 213 238 0 0 chr10 87935094 87935136 -57654152 + (TTCA)n Simple_repeat Simple_repeat 1 42 0 980 275 17 17 chr10 87935327 87935614 -57653674 - MER41E LTR ERV1 0 512 226 2115 114 7 0 chr10 87936826 87937123 -57652165 - AluSx SINE Alu -13 299 1 4147 111 147 138 chr10 87937508 87938884 -57650404 + pTR5 LTR ERV1 742 2438 0 182 200 178 74 chr10 87939139 87939274 -57650014 + L2 LINE L2 2638 2786 -528 310 264 154 16 chr10 87939319 87939501 -57649787 + L2 LINE L2 2950 3156 -157 1145 196 4 33 chr10 87939501 87939746 -57649542 - L1MB5 LINE L1 0 6174 5937 572 222 8 17 chr10 87939753 87939992 -57649296 + CT-rich Low_complexity Low_complexity 1 237 0 326 290 16 40 chr10 87939998 87940122 -57649166 + L2 LINE L2 3158 3278 -35 1900 149 0 10 chr10 87940409 87940769 -57648519 - AluJb SINE Alu 0 363 7 2303 70 0 7 chr10 87940954 87941254 -57648034 - AluY SINE Alu -13 298 1 2039 113 10 0 chr10 87942598 87942891 -57646397 - AluSx SINE Alu -16 296 1 378 0 0 0 chr10 87943631 87943673 -57645615 + (TG)n Simple_repeat Simple_repeat 1 42 0 222 300 45 64 chr10 87943928 87944038 -57645250 + MIR SINE MIR 108 215 -47 183 27 54 27 chr10 87944391 87944428 -57644860 + (TTAA)n Simple_repeat Simple_repeat 1 38 0 485 161 130 80 chr10 87944696 87944739 -57644549 - MER104 DNA Tc2 -1722 176 137 2295 77 0 3 chr10 87944739 87945036 -57644252 + AluY SINE Alu 1 296 -15 485 161 130 80 chr10 87945036 87945154 -57644134 - MER104 DNA Tc2 -1761 137 7 267 277 220 0 chr10 87945159 87945271 -57644017 - MIR SINE MIR -65 143 17 729 292 87 39 chr10 87945351 87945474 -57643814 + L1MC/D LINE L1 5010 5126 -1152 2391 68 0 7 chr10 87945474 87945781 -57643507 - AluY SINE Alu -6 305 1 729 292 87 39 chr10 87945781 87946149 -57643139 + L1MC/D LINE L1 5126 5535 -743 1428 206 53 36 chr10 87946244 87946603 -57642685 - MLT1A2 LTR MaLR 0 374 10 184 292 112 11 chr10 87946636 87946725 -57642563 - MIR3 SINE MIR -110 98 1 363 121 0 0 chr10 87947291 87947349 -57641939 + (TC)n Simple_repeat Simple_repeat 1 58 0 2187 95 0 7 chr10 87947349 87947645 -57641643 - AluSq SINE Alu -19 294 1 193 281 0 18 chr10 87947774 87947831 -57641457 - MIR3 SINE MIR -53 155 100 358 242 6 135 chr10 87948277 87948455 -57640833 + MIR SINE MIR 37 191 -71 1759 156 74 61 chr10 87948819 87948860 -57640428 - MLT2C1 LTR ERVL 0 397 358 192 77 0 0 chr10 87948860 87948886 -57640402 + (TG)n Simple_repeat Simple_repeat 1 26 0 1759 156 74 61 chr10 87948886 87949155 -57640133 - MLT2C1 LTR ERVL -39 358 78 2431 53 20 0 chr10 87949155 87949455 -57639833 + AluY SINE Alu 1 306 -5 1759 156 74 61 chr10 87949455 87949535 -57639753 - MLT2C1 LTR ERVL -319 78 1 515 267 0 0 chr10 87950110 87950211 -57639077 - MER81 DNA DNA -13 101 1 7146 224 72 23 chr10 87950534 87952837 -57636451 - L1M4 LINE L1 -1166 4980 2564 387 171 8 122 chr10 87952848 87952903 -57636385 - L1MB7 LINE L1 0 6184 6124 186 43 0 0 chr10 87952903 87952926 -57636362 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 1290 183 3 82 chr10 87952926 87953232 -57636056 - AluSx SINE Alu -30 282 1 387 171 8 122 chr10 87953232 87953298 -57635990 - L1MB7 LINE L1 -58 6126 6076 317 212 45 0 chr10 87953294 87953360 -57635928 - L1M4 LINE L1 -1020 5126 5058 * 841 299 109 15 chr10 87953375 87953713 -57635575 - L1M4 LINE L1 -2743 3403 3034 1644 150 4 4 chr10 87954065 87954331 -57634957 - AluJb SINE Alu -12 300 35 2438 57 0 0 chr10 87954413 87954714 -57634574 - AluY SINE Alu -10 301 1 24 0 0 0 chr10 87954719 87954743 -57634545 + AT_rich Low_complexity Low_complexity 1 24 0 1539 164 0 69 chr10 87954800 87955117 -57634171 - AluJo SINE Alu -17 295 1 252 0 0 0 chr10 87955121 87955149 -57634139 + (T)n Simple_repeat Simple_repeat 1 28 0 3246 199 156 8 chr10 87955187 87955964 -57633324 + Charlie1a DNA MER1_type 3 894 -561 758 140 53 20 chr10 87955977 87956127 -57633161 - L1MD3 LINE L1 0 7995 7841 1516 164 50 25 chr10 87956127 87956444 -57632844 + Charlie1a DNA MER1_type 881 1205 -250 315 0 0 0 chr10 87956456 87956491 -57632797 + (CA)n Simple_repeat Simple_repeat 2 36 0 4208 128 15 25 chr10 87956553 87956708 -57632580 - L1MA8 LINE L1 -346 5945 5790 1171 178 5 5 chr10 87956708 87956916 -57632372 - MER6B DNA MER2_type -1 209 2 4208 128 15 25 chr10 87956916 87957317 -57631971 - L1MA8 LINE L1 -501 5790 5397 2749 16 0 0 chr10 87957317 87957628 -57631660 - AluYa5 SINE Alu 0 311 1 4208 128 15 25 chr10 87957628 87957979 -57631309 - L1MA8 LINE L1 -894 5397 5044 721 186 79 9 chr10 87957988 87958203 -57631085 + Charlie1a DNA MER1_type 1221 1450 -5 482 222 20 59 chr10 87958171 87958324 -57630964 + MER105 DNA DNA 13 159 -45 * 236 238 0 0 chr10 87958325 87958367 -57630921 - MER105 DNA DNA -162 42 1 218 292 56 14 chr10 87958379 87958451 -57630837 + MIR SINE MIR 188 262 0 367 292 5 19 chr10 87958497 87958706 -57630582 - L1M4 LINE L1 -917 5229 5024 1634 251 99 9 chr10 87958732 87959259 -57630029 + L2 LINE L2 1875 2448 -866 560 57 0 90 chr10 87959260 87959271 -57630017 - L1MA3 LINE L1 -239 6066 6056 2834 115 38 0 chr10 87959271 87959689 -57629599 - MER57B LTR ERV1 0 434 1 560 57 0 90 chr10 87959689 87959799 -57629489 - L1MA3 LINE L1 -249 6056 5956 997 163 0 38 chr10 87959804 87959988 -57629300 - FRAM SINE Alu 0 176 1 450 224 42 75 chr10 87960013 87960227 -57629061 - MLT1J LTR MaLR -75 436 230 366 294 0 0 chr10 87960248 87960350 -57628938 + AluSp/q SINE Alu 200 301 -2 1596 84 51 103 chr10 87960377 87960650 -57628638 + AluSx SINE Alu 2 260 -52 911 251 81 63 chr10 87961521 87961665 -57627623 + MLT1H1 LTR MaLR 1 141 -414 2090 145 3 0 chr10 87961665 87961962 -57627326 - AluSx SINE Alu -12 300 3 911 251 81 63 chr10 87961962 87962321 -57626967 + MLT1H1 LTR MaLR 137 514 -37 2581 66 0 0 chr10 87962321 87962623 -57626665 - AluY SINE Alu -9 302 1 1185 45 0 0 chr10 87962627 87962759 -57626529 - AluY SINE Alu -179 132 1 262 200 0 0 chr10 87962759 87962809 -57626479 + MLT1H1 LTR MaLR 489 538 -4 200 294 0 82 chr10 87962822 87962861 -57626427 + L3 LINE CR1 1497 1527 -50 1619 198 0 0 chr10 87962861 87963134 -57626154 - AluJo SINE Alu -5 307 35 200 294 0 82 chr10 87963134 87963179 -57626109 + L3 LINE CR1 1527 1574 -3 220 345 111 33 chr10 87963383 87964047 -57625241 - L2 LINE L2 -354 2960 2245 256 383 16 16 chr10 87964860 87964988 -57624300 - L2 LINE L2 0 3272 3145 1114 170 5 19 chr10 87965029 87965241 -57624047 - MER72 LTR ERV1 0 722 514 * 2035 160 73 3 chr10 87965229 87965585 -57623703 - MER72 LTR ERV1 -328 394 14 1336 149 43 32 chr10 87966268 87966550 -57622738 + MLT1B LTR MaLR 1 285 -105 324 0 0 0 chr10 87966695 87966731 -57622557 + (TG)n Simple_repeat Simple_repeat 2 37 0 1041 225 22 7 chr10 87966731 87967007 -57622281 - MLT2D LTR ERVL -129 285 6 219 316 105 0 chr10 87967812 87967926 -57621362 - L2 LINE L2 -1 3271 3146 1173 155 63 17 chr10 87968869 87969108 -57620180 + L1MB7 LINE L1 5916 6165 -19 2382 198 24 15 chr10 87969322 87969863 -57619425 + MER74A LTR ERVL 1 546 -12 313 357 147 6 chr10 87969964 87970278 -57619010 + L2 LINE L2 2898 3255 -17 1362 126 5 29 chr10 87970284 87970491 -57618797 - AluJo SINE Alu -29 283 82 272 152 0 51 chr10 87970521 87970600 -57618688 + AluS SINE Alu 2 76 -227 322 190 40 10 chr10 87970820 87970920 -57618368 - L1MC5 LINE L1 -31 7930 7828 270 215 65 54 chr10 87972993 87973086 -57616202 + MER21B LTR ERV1 3 96 -767 3254 207 87 18 chr10 87973092 87973864 -57615424 + MER21B LTR ERV1 19 843 -20 312 285 52 47 chr10 87973960 87974132 -57615156 + LTR33 LTR ERVL 75 247 -274 1932 147 7 13 chr10 87975279 87975578 -57613710 + AluJb SINE Alu 1 297 -15 42 20 0 0 chr10 87975581 87975630 -57613658 + AT_rich Low_complexity Low_complexity 1 49 0 1816 130 11 14 chr10 87976119 87976403 -57612885 + AluSq SINE Alu 1 283 -30 648 177 43 30 chr10 87977110 87977274 -57612014 + MLT1B LTR MaLR 225 390 0 326 261 203 26 chr10 87977669 87977822 -57611466 + HAL1 LINE L1 407 586 -1921 2039 265 99 38 chr10 87978344 87978903 -57610385 + HAL1 LINE L1 582 1105 -1402 2274 95 10 7 chr10 87978903 87979198 -57610090 + AluSx SINE Alu 1 296 -16 2039 265 99 38 chr10 87979198 87979747 -57609541 + HAL1 LINE L1 1105 1758 -749 265 219 21 13 chr10 87980082 87980191 -57609097 - HsTC2 DNA Tc2 -62 1836 6 401 242 65 77 chr10 87980230 87980478 -57608810 + HAL1 LINE L1 2151 2395 -112 2334 78 31 3 chr10 87980837 87981131 -57608157 - AluSx SINE Alu -10 302 1 4315 122 92 66 chr10 87981211 87982651 -57606637 + pTR5 LTR ERV1 49 2436 -2 714 70 122 0 chr10 87982654 87982769 -57606519 - AluSg/x SINE Alu 0 312 184 2131 111 7 0 chr10 87982780 87983095 -57606193 - AluSp SINE Alu 0 317 1 2217 164 0 5 chr10 87983096 87983473 -57605815 - L1PA16 LINE L1 0 6166 5792 223 288 9 90 chr10 87983473 87983550 -57605738 - MIR SINE MIR -53 209 142 2230 195 33 13 chr10 87983550 87984002 -57605286 - LOR1b LTR ERV1 0 461 1 223 288 9 90 chr10 87984002 87984035 -57605253 - MIR SINE MIR -120 142 108 1092 153 18 0 chr10 87984508 87984678 -57604610 - AluSg/x SINE Alu 0 310 138 492 338 6 14 chr10 87985137 87985484 -57603804 + G-rich Low_complexity Low_complexity 1 343 0 1374 129 0 32 chr10 87985485 87985733 -57603555 - L1MB7 LINE L1 -331 6351 6112 1618 157 50 56 chr10 87985733 87985942 -57603346 - MSTC LTR MaLR 0 428 220 2169 116 24 0 chr10 87985942 87986236 -57603052 - AluSx SINE Alu -11 301 1 1618 157 50 56 chr10 87986236 87986403 -57602885 - MSTC LTR MaLR -208 220 54 7736 203 28 18 chr10 87986403 87987152 -57602136 - L1MB7 LINE L1 -609 6073 5332 1705 188 3 20 chr10 87987152 87987455 -57601833 - AluSx SINE Alu -14 298 1 7736 203 28 18 chr10 87987455 87988242 -57601046 - L1MB7 LINE L1 -1350 5332 4522 1743 185 0 13 chr10 87988242 87988540 -57600748 - AluJb SINE Alu -8 304 11 7736 203 28 18 chr10 87988540 87989097 -57600191 - L1MB7 LINE L1 -2160 4522 3972 707 213 19 0 chr10 87989109 87989264 -57600024 - L1MB7 LINE L1 -6379 163 6 42 0 0 0 chr10 87989461 87989503 -57599785 + AT_rich Low_complexity Low_complexity 1 42 0 1322 173 100 67 chr10 87991340 87991670 -57597618 - MER2 DNA MER2_type -3 341 1 193 279 0 0 chr10 87991671 87991714 -57597574 - L2 LINE L2 -17 3296 3254 2288 102 0 0 chr10 87991821 87992139 -57597149 + AluSx SINE Alu 1 318 0 462 158 189 18 chr10 87992515 87992663 -57596625 + MIR SINE MIR 20 192 -62 337 304 137 6 chr10 87994459 87994620 -57594668 - MIR SINE MIR 0 262 81 288 0 0 0 chr10 87994959 87994991 -57594297 + (TG)n Simple_repeat Simple_repeat 1 32 0 229 324 70 35 chr10 87995047 87995189 -57594099 - L2 LINE L2 -508 2806 2660 183 293 104 19 chr10 87995619 87995725 -57593563 + L2 LINE L2 2947 3061 -211 363 233 121 43 chr10 87995939 87996055 -57593233 - L2 LINE L2 -2 3311 3187 1865 166 0 7 chr10 87996616 87996906 -57592382 + AluJb SINE Alu 1 288 -24 399 264 0 11 chr10 87997157 87997244 -57592044 + MIR3 SINE MIR 92 177 -31 660 292 24 24 chr10 87997335 87997544 -57591744 + MIR SINE MIR 20 228 -34 360 90 209 15 chr10 87997873 87997940 -57591348 + MADE1 DNA Mariner 1 80 0 242 307 58 29 chr10 87998256 87998393 -57590895 + MIR3 SINE MIR 9 149 -59 467 304 86 43 chr10 87999128 87999229 -57590059 - L1MC4a LINE L1 -1677 6131 6036 2473 90 0 0 chr10 87999229 87999530 -57589758 - AluY SINE Alu -10 301 1 467 304 86 43 chr10 87999530 87999754 -57589534 - L1MC4a LINE L1 -1772 6036 5792 279 254 92 32 chr10 87999771 87999942 -57589346 - L1MC4a LINE L1 -823 5323 5139 2316 112 0 13 chr10 87999942 88000256 -57589032 - AluSx SINE Alu -2 310 1 279 254 92 32 chr10 88000256 88000269 -57589019 - L1MC4a LINE L1 -1007 5139 5128 580 135 6 159 chr10 88000719 88000798 -57588490 + MER63 DNA MER1_type 895 936 -125 2209 84 7 14 chr10 88000798 88001085 -57588203 - AluSx SINE Alu -27 285 1 580 135 6 159 chr10 88001085 88001175 -57588113 + MER63 DNA MER1_type 936 1038 -23 321 244 163 29 chr10 88001229 88001536 -57587752 + L1ME4a LINE L1 5616 5963 -158 1549 106 0 0 chr10 88002336 88002535 -57586753 - AluSg/x SINE Alu -14 296 98 442 39 0 0 chr10 88002791 88002843 -57586445 - AluY SINE Alu -260 53 2 180 237 0 43 chr10 88003794 88003887 -57585401 + CT-rich Low_complexity Low_complexity 5 93 0 210 307 53 18 chr10 88004360 88004474 -57584814 + L2 LINE L2 3153 3270 -2 593 313 103 17 chr10 88004545 88004893 -57584395 + L2 LINE L2 2855 3232 -81 693 274 69 58 chr10 88005250 88005406 -57583882 - MLT1I LTR MaLR -21 388 226 2297 114 0 13 chr10 88005406 88005722 -57583566 + AluSq SINE Alu 1 312 -1 693 274 69 58 chr10 88005722 88005839 -57583449 - MLT1I LTR MaLR -183 226 112 310 244 60 83 chr10 88006924 88007092 -57582196 - MLT1H LTR MaLR -223 326 163 220 320 196 0 chr10 88007412 88007509 -57581779 + MIR SINE MIR 72 187 -75 245 315 104 100 chr10 88008518 88008647 -57580641 + L3 LINE CR1 1199 1331 -246 2398 156 70 0 chr10 88008647 88009044 -57580244 - MSTB LTR MaLR 0 426 2 245 315 104 100 chr10 88009044 88009155 -57580133 + L3 LINE CR1 1331 1440 -137 340 308 19 0 chr10 88009781 88009888 -57579400 - MIR SINE MIR -68 140 32 360 284 10 0 chr10 88010358 88010460 -57578828 + MIR SINE MIR 139 241 -21 883 302 0 4 chr10 88011380 88011635 -57577653 - MIR SINE MIR 0 262 9 279 330 11 0 chr10 88012061 88012152 -57577136 - L2 LINE L2 -51 3262 3171 1107 295 91 34 chr10 88012153 88012658 -57576630 - MLT1K LTR MaLR -42 546 13 2149 145 92 22 chr10 88014643 88015043 -57574245 + MSTA LTR MaLR 1 428 0 707 275 10 5 chr10 88015160 88015360 -57573928 + MIR SINE MIR 58 258 -4 356 275 55 0 chr10 88015386 88015495 -57573793 - L2 LINE L2 -4 3309 3195 913 161 151 0 chr10 88015645 88015831 -57573457 + MER20 DNA MER1_type 2 215 -4 1373 94 0 0 chr10 88016371 88016541 -57572747 - AluSg SINE Alu -140 170 1 1225 219 55 63 chr10 88017379 88017426 -57571862 - MLT1A1 LTR MaLR -2 363 317 2301 104 3 0 chr10 88017426 88017735 -57571553 - AluSx SINE Alu -2 310 1 1225 219 55 63 chr10 88017735 88018053 -57571235 - MLT1A1 LTR MaLR -48 317 1 338 301 26 9 chr10 88019103 88019216 -57570072 + MER5B DNA MER1_type 8 122 -56 30 0 0 0 chr10 88019381 88019411 -57569877 + AT_rich Low_complexity Low_complexity 1 30 0 1235 212 67 39 chr10 88019825 88020081 -57569207 + MER2 DNA MER2_type 6 274 -71 2255 118 3 6 chr10 88020081 88020394 -57568894 - AluSx SINE Alu 0 312 1 1235 212 67 39 chr10 88020394 88020467 -57568821 + MER2 DNA MER2_type 274 344 -1 335 306 94 6 chr10 88020742 88020922 -57568366 - HAL1 LINE L1 -863 1644 1449 299 252 87 9 chr10 88020969 88021084 -57568204 - L1MEd LINE L1 -4919 1200 1077 319 224 14 136 chr10 88021362 88021509 -57567779 + MIR3 SINE MIR 15 143 -65 275 324 37 0 chr10 88022203 88022311 -57566977 + L2 LINE L2 3201 3312 -1 1994 135 72 26 chr10 88022712 88023060 -57566228 + THE1B LTR MaLR 1 364 0 2355 134 52 45 chr10 88023227 88023266 -57566022 - MSTA LTR MaLR 0 428 391 2382 103 0 13 chr10 88023266 88023578 -57565710 + AluSg SINE Alu 1 308 -2 2355 134 52 45 chr10 88023578 88023963 -57565325 - MSTA LTR MaLR -37 391 1 404 264 17 62 chr10 88024208 88024386 -57564902 - MIR SINE MIR -11 251 82 875 293 85 6 chr10 88024486 88024817 -57564471 - LTR16B LTR ERVL 0 464 108 230 196 59 0 chr10 88025539 88025590 -57563698 + L1MA8 LINE L1 5483 5536 -776 4047 104 25 68 chr10 88025610 88025782 -57563506 + L1MA8 LINE L1 5596 5774 -517 1867 167 3 3 chr10 88025782 88026069 -57563219 - AluJo SINE Alu -25 287 1 4047 104 25 68 chr10 88026069 88026459 -57562829 + L1MA8 LINE L1 5774 6123 -168 1284 189 35 92 chr10 88026459 88026776 -57562512 - AluJo SINE Alu -13 299 1 4047 104 25 68 chr10 88026776 88026934 -57562354 + L1MA8 LINE L1 6123 6286 -5 331 297 45 13 chr10 88029494 88029649 -57559639 + MIR SINE MIR 53 212 -50 203 316 20 0 chr10 88030210 88030308 -57558980 - MIR SINE MIR -17 245 146 37241 65 8 9 chr10 88030315 88036032 -57553256 - L1PA6 LINE L1 0 6154 442 184 196 87 0 chr10 88036032 88036078 -57553210 - MIR SINE MIR -96 166 117 256 227 61 15 chr10 88036176 88036242 -57553046 + L3 LINE CR1 1405 1473 -104 1104 145 0 0 chr10 88036631 88036783 -57552505 - FRAM SINE Alu -24 152 1 412 338 79 13 chr10 88036862 88037090 -57552198 + MIR SINE MIR 20 262 0 1207 281 56 7 chr10 88037095 88037657 -57551631 - L1ME3 LINE L1 -295 5867 5272 368 283 68 85 chr10 88037687 88037980 -57551308 - HAL1 LINE L1 -1382 1125 838 293 277 0 0 chr10 88038938 88039003 -57550285 + L2 LINE L2 3208 3272 0 194 275 12 75 chr10 88039592 88039672 -57549616 + MIR SINE MIR 7 81 -181 243 378 0 0 chr10 88040489 88040579 -57548709 + MIR SINE MIR 36 125 -83 346 281 13 72 chr10 88041560 88041713 -57547575 - MIR SINE MIR -34 228 85 397 272 0 0 chr10 88041807 88041910 -57547378 - MER5A DNA MER1_type -80 109 7 1406 171 175 0 chr10 88041924 88042204 -57547084 + MER58B DNA MER1_type 1 329 -12 3354 101 12 4 chr10 88043021 88043508 -57545780 - L1MB3 LINE L1 -7 6176 5686 321 289 41 10 chr10 88043658 88043755 -57545533 + MER90 LTR ERV1 469 568 -7 3542 163 15 9 chr10 88044128 88045191 -57544097 - L1M2 LINE L1 -554 5737 4672 689 208 0 8 chr10 88045342 88045472 -57543816 + AluJb SINE Alu 125 253 -59 211 220 18 48 chr10 88045843 88046011 -57543277 + CT-rich Low_complexity Low_complexity 2 164 0 * 377 230 20 20 chr10 88045986 88046134 -57543154 + T-rich Low_complexity Low_complexity 2 149 0 281 299 8 12 chr10 88046135 88046386 -57542902 + CT-rich Low_complexity Low_complexity 1 250 0 3244 184 5 8 chr10 88046563 88047168 -57542120 + L1P LINE L1 3706 4308 -1838 24 32 0 0 chr10 88047406 88047437 -57541851 + GC_rich Low_complexity Low_complexity 1 31 0 6263 80 21 0 chr10 88047630 88048497 -57540791 + L1P LINE L1 3807 4691 -1455 5770 105 48 14 chr10 88049141 88050066 -57539222 + L1MA3 LINE L1 5274 6229 -76 734 148 45 13 chr10 88050078 88050233 -57539055 + L1M LINE L1 5259 5418 -884 293 305 61 19 chr10 88050605 88050867 -57538421 + L1M4 LINE L1 4220 4492 -1654 1073 236 46 40 chr10 88050867 88050995 -57538293 + MLT1C LTR MaLR 1 127 -340 2052 153 53 8 chr10 88050995 88051354 -57537934 - THE1C LTR MaLR 0 375 1 1073 236 46 40 chr10 88051354 88051572 -57537716 + MLT1C LTR MaLR 127 349 -118 525 146 0 0 chr10 88051601 88051697 -57537591 - L1MA7 LINE L1 -1 6290 6195 508 165 28 0 chr10 88051713 88051822 -57537466 + L1MA7 LINE L1 6108 6219 -72 631 227 0 8 chr10 88051843 88051971 -57537317 + MLT1C LTR MaLR 340 466 -1 448 169 13 0 chr10 88051974 88052051 -57537237 + Tigger1 DNA MER2_type 5 82 -2336 607 238 60 0 chr10 88052052 88052203 -57537085 + Tigger1 DNA MER2_type 246 405 -2013 288 209 23 52 chr10 88052355 88052527 -57536761 + A-rich Low_complexity Low_complexity 2 168 0 981 165 0 6 chr10 88052756 88052914 -57536374 + AluSg/x SINE Alu 140 296 -16 233 175 63 0 chr10 88052962 88053025 -57536263 + (TA)n Simple_repeat Simple_repeat 2 68 0 312 304 70 52 chr10 88053053 88053283 -57536005 - L1MC4 LINE L1 -180 7862 7629 215 224 0 45 chr10 88054189 88054256 -57535032 + CT-rich Low_complexity Low_complexity 3 66 0 2303 187 55 16 chr10 88054385 88054824 -57534464 + MER21B LTR ERV1 282 737 -126 2802 104 28 2 chr10 88054825 88055248 -57534040 - MER57B LTR ERV1 0 434 1 2262 79 3 10 chr10 88056328 88056619 -57532669 + AluSp SINE Alu 10 298 -15 1695 93 20 8 chr10 88058851 88059098 -57530190 - L1PA8A LINE L1 0 6131 5882 1891 90 16 12 chr10 88059150 88059406 -57529882 + AluSc SINE Alu 45 301 -8 2310 87 10 0 chr10 88059519 88059817 -57529471 + AluY SINE Alu 1 301 -10 1344 156 4 4 chr10 88059990 88060215 -57529073 - L1 LINE L1 -1864 4282 4058 916 176 80 1 chr10 88060215 88060411 -57528877 - LTR47A LTR ERVL 0 452 243 1093 151 35 15 chr10 88060459 88060737 -57528551 - LTR49-int LTR ERV1 -394 5686 4455 820 78 23 113 chr10 88060737 88060994 -57528294 + AluSc SINE Alu 54 287 -22 1191 151 32 40 chr10 88061021 88061273 -57528015 - LTR49-int LTR ERV1 -851 5480 5231 3951 160 16 31 chr10 88061273 88062025 -57527263 - L1PB4 LINE L1 -1 6155 5415 265 395 0 12 chr10 88062106 88062268 -57527020 + CT-rich Low_complexity Low_complexity 1 160 0 20682 101 23 2 chr10 88062387 88065491 -57523797 + L1P LINE L1 1242 4409 -1737 381 329 8 16 chr10 88066839 88066984 -57522304 - MIR SINE MIR -58 150 19 582 346 39 8 chr10 88067372 88067606 -57521682 - MIR SINE MIR -2 260 20 443 220 220 13 chr10 88067624 88067774 -57521514 + MER5A DNA MER1_type 9 189 0 279 0 0 0 chr10 88067961 88067992 -57521296 + (CAAT)n Simple_repeat Simple_repeat 2 32 0 645 30 53 38 chr10 88067992 88068123 -57521165 + (TCTA)n Simple_repeat Simple_repeat 1 133 0 390 337 47 24 chr10 88068479 88068648 -57520640 + MIR3 SINE MIR 35 207 -1 2432 238 48 37 chr10 88068778 88069544 -57519744 - MER69B DNA AcHobo -91 1135 361 1612 146 59 17 chr10 88069985 88070273 -57519015 - AluJo SINE Alu -12 300 1 29 0 0 0 chr10 88070284 88070313 -57518975 + AT_rich Low_complexity Low_complexity 1 29 0 1232 220 80 29 chr10 88070359 88070709 -57518579 - MER93a LTR ERV1 0 402 35 382 272 30 56 chr10 88070778 88071046 -57518242 + L1MC5 LINE L1 7428 7688 -273 415 212 20 121 chr10 88071832 88072030 -57517258 + MER5B DNA MER1_type 1 178 0 652 213 53 41 chr10 88073152 88073321 -57515967 - MER5B DNA MER1_type -7 171 1 253 308 134 29 chr10 88073637 88073809 -57515479 + L2 LINE L2 3124 3313 0 597 154 0 0 chr10 88073815 88073925 -57515363 + (TGGA)n Simple_repeat Simple_repeat 4 113 0 2093 115 128 33 chr10 88074005 88074395 -57514893 - MSTA LTR MaLR 0 428 2 23 0 0 0 chr10 88075323 88075346 -57513942 + GC_rich Low_complexity Low_complexity 1 23 0 302 267 58 23 chr10 88075536 88075622 -57513666 - MER77 LTR ERV1 -476 129 41 635 239 181 21 chr10 88075639 88075877 -57513411 - L2 LINE L2 -995 2319 2044 286 261 176 20 chr10 88076090 88076243 -57513045 - MIR SINE MIR 0 262 86 210 322 102 0 chr10 88076283 88076401 -57512887 + L3 LINE CR1 1259 1388 -189 2329 65 0 7 chr10 88076663 88076970 -57512318 - AluY SINE Alu -6 305 1 310 208 430 7 chr10 88077049 88077198 -57512090 - MIR SINE MIR -17 245 34 387 293 57 0 chr10 88077670 88077776 -57511512 - MIR SINE MIR -95 167 56 185 262 24 0 chr10 88078464 88078506 -57510782 - L3b LINE CR1 -15 1568 1526 2106 158 103 3 chr10 88079060 88079447 -57509841 + MSTB LTR MaLR 1 426 0 667 217 106 28 chr10 88080163 88080380 -57508908 - L1MA9 LINE L1 -39 6273 6040 373 162 0 14 chr10 88080386 88080460 -57508828 - L1MC3 LINE L1 -12 7773 7701 14245 118 29 23 chr10 88080492 88082460 -57506828 + Tigger1 DNA MER2_type 2 1986 -432 1577 93 0 0 chr10 88082460 88082674 -57506614 + L1PA13 LINE L1 5946 6159 -4 14245 118 29 23 chr10 88082674 88082914 -57506374 + Tigger1 DNA MER2_type 1986 2223 -195 222 37 0 0 chr10 88082918 88082945 -57506343 + (TA)n Simple_repeat Simple_repeat 1 27 0 1962 110 14 3 chr10 88082951 88083242 -57506046 - AluSg SINE Alu -16 294 1 27 22 0 22 chr10 88083242 88083266 -57506022 + AT_rich Low_complexity Low_complexity 1 25 -19 2326 80 0 3 chr10 88083266 88083578 -57505710 - AluY SINE Alu 0 311 1 27 22 0 22 chr10 88083578 88083598 -57505690 + AT_rich Low_complexity Low_complexity 25 44 0 1408 185 29 120 chr10 88083603 88083755 -57505533 - MER4A LTR ERV1 0 695 531 2174 90 0 0 chr10 88083755 88084044 -57505244 - AluSc SINE Alu -7 302 14 1408 185 29 120 chr10 88084044 88084597 -57504691 - MER4A LTR ERV1 -164 531 1 871 186 0 81 chr10 88084597 88084669 -57504619 + Tigger1 DNA MER2_type 2240 2317 -101 1984 122 7 10 chr10 88084669 88084972 -57504316 + AluSx SINE Alu 3 304 -8 871 186 0 81 chr10 88084972 88085094 -57504194 + Tigger1 DNA MER2_type 2317 2417 -1 * 2816 224 61 79 chr10 88085094 88085902 -57503386 + MER21B LTR ERV1 19 811 -52 1210 119 20 91 chr10 88085929 88086182 -57503106 - L1MC3 LINE L1 -82 7703 7469 1646 240 53 96 chr10 88086439 88087161 -57502127 + LTR8 LTR ERV1 1 691 0 585 278 120 47 chr10 88087202 88087649 -57501639 - L1MDa LINE L1 -2829 3711 3298 2066 127 0 9 chr10 88087649 88087964 -57501324 - AluSx SINE Alu 0 312 1 585 278 120 47 chr10 88087964 88088597 -57500691 - L1MDa LINE L1 -3242 3298 2552 388 172 2 31 chr10 88088601 88088695 -57500593 + LTR24B LTR ERV1 9 97 -368 646 295 50 38 chr10 88088774 88089093 -57500195 + LTR24B LTR ERV1 145 569 0 341 244 84 46 chr10 88089095 88089226 -57500062 - L1MDa LINE L1 -3987 2553 2418 348 296 67 0 chr10 88089270 88089405 -57499883 - L1 LINE L1 -1984 4162 4019 656 205 103 26 chr10 88089631 88089787 -57499501 + MLT1J LTR MaLR 1 168 -343 505 214 92 0 chr10 88089931 88090062 -57499226 + MLT1J LTR MaLR 366 508 -3 21 0 0 0 chr10 88090247 88090268 -57499020 + AT_rich Low_complexity Low_complexity 1 21 0 358 21 21 0 chr10 88090693 88090740 -57498548 + MADE1 DNA Mariner 1 48 -32 395 342 98 22 chr10 88091264 88091580 -57497708 - L2 LINE L2 -638 2676 2337 5223 164 31 8 chr10 88092282 88093108 -57496180 + MER49 LTR ERV1 32 881 -42 2188 74 0 86 chr10 88093108 88093445 -57495843 + AluY SINE Alu 1 308 -3 5223 164 31 8 chr10 88093445 88093490 -57495798 + MER49 LTR ERV1 881 923 0 1581 161 0 58 chr10 88093785 88094114 -57495174 - AluJb SINE Alu -2 310 1 279 79 0 0 chr10 88094120 88094158 -57495130 + (T)n Simple_repeat Simple_repeat 1 38 0 1572 47 0 0 chr10 88094168 88094361 -57494927 - L1PA4 LINE L1 0 6155 5963 626 323 36 5 chr10 88094616 88094811 -57494477 + MIR SINE MIR 14 214 -48 205 277 109 36 chr10 88094838 88094975 -57494313 + MIR3 SINE MIR 1 147 -61 545 300 223 31 chr10 88097122 88097575 -57491713 - L3 LINE CR1 -44 1533 994 274 315 39 31 chr10 88097854 88097981 -57491307 + MIR3 SINE MIR 29 156 -52 374 323 25 35 chr10 88099672 88099870 -57489418 + MIR SINE MIR 12 207 -55 218 263 40 20 chr10 88100807 88100906 -57488382 - MIR3 SINE MIR -22 186 86 549 261 154 31 chr10 88100931 88101314 -57487974 - HAL1 LINE L1 -74 2433 2004 1613 130 136 30 chr10 88102562 88102901 -57486387 + THE1C LTR MaLR 1 375 0 399 127 0 0 chr10 88103071 88103134 -57486154 + (TTCC)n Simple_repeat Simple_repeat 4 66 0 1766 123 35 53 chr10 88103830 88104148 -57485140 - MLT1B LTR MaLR -3 387 76 223 220 0 20 chr10 88104677 88104727 -57484561 - MIR SINE MIR -119 143 95 709 252 53 19 chr10 88105616 88105822 -57483466 + MIR SINE MIR 48 260 -2 723 283 31 40 chr10 88106815 88107041 -57482247 + MIR SINE MIR 12 235 -27 193 289 78 0 chr10 88107184 88107274 -57482014 - MIR SINE MIR -72 136 40 2877 130 64 2 chr10 88109513 88109849 -57479439 + L1MA9 LINE L1 5806 6181 -131 351 0 0 0 chr10 88109849 88109888 -57479400 + (CA)n Simple_repeat Simple_repeat 1 39 0 2877 130 64 2 chr10 88109888 88110019 -57479269 + L1MA9 LINE L1 6181 6302 -10 329 246 34 17 chr10 88110133 88110251 -57479037 - L2 LINE L2 -717 2597 2478 2153 103 0 0 chr10 88110378 88110670 -57478618 - AluSx SINE Alu -20 292 1 196 276 49 53 chr10 88110679 88110817 -57478471 - MIR SINE MIR -40 222 89 3109 99 24 39 chr10 88111086 88111579 -57477709 + L1PB4 LINE L1 5476 5961 -195 256 175 159 87 chr10 88111625 88111751 -57477537 + L1MC5 LINE L1 7795 7929 -32 2286 103 0 0 chr10 88112137 88112427 -57476861 - AluSc SINE Alu -19 290 1 275 281 37 0 chr10 88113069 88113151 -57476137 + MIR SINE MIR 63 147 -61 511 202 92 0 chr10 88113638 88113757 -57475531 - MIR SINE MIR -54 208 79 21 36 0 0 chr10 88113923 88113951 -57475337 + AT_rich Low_complexity Low_complexity 1 28 0 23 54 0 0 chr10 88114141 88114178 -57475110 + AT_rich Low_complexity Low_complexity 1 37 0 2291 95 7 0 chr10 88114654 88114950 -57474338 - AluSp SINE Alu -15 298 1 2709 67 0 3 chr10 88115307 88115651 -57473637 + LTR14A LTR ERVK 1 343 -1 2103 141 3 0 chr10 88115651 88115950 -57473338 - AluSx SINE Alu -8 304 5 457 100 0 0 chr10 88115952 88116012 -57473276 - AluSq/x SINE Alu -175 137 78 1344 158 0 14 chr10 88116012 88116221 -57473067 - AluSx SINE Alu -100 212 7 593 180 87 19 chr10 88116240 88116401 -57472887 - HAL1b LINE L1 -598 750 579 24 32 0 0 chr10 88116445 88116476 -57472812 + AT_rich Low_complexity Low_complexity 1 31 0 424 299 183 9 chr10 88121345 88121777 -57467511 + L2 LINE L2 2540 3052 -261 1546 227 192 16 chr10 88123994 88124483 -57464805 - MLT1G LTR MaLR -6 584 10 2358 119 19 14 chr10 88126218 88126580 -57462708 - THE1B LTR MaLR 0 364 1 2491 70 0 3 chr10 88126718 88127016 -57462272 - AluY SINE Alu -14 297 1 250 168 18 18 chr10 88127026 88127090 -57462198 - MLT1H LTR MaLR -2 553 484 328 231 163 69 chr10 88127190 88127393 -57461895 - MLT1H LTR MaLR -246 303 82 43462 34 21 3 chr10 88127839 88133875 -57455413 - L1PA2 LINE L1 -1 6154 4 1281 196 90 40 chr10 88134778 88135240 -57454048 + MLT1E2 LTR MaLR 97 605 -49 2093 122 3 3 chr10 88136496 88136790 -57452498 - AluSg SINE Alu -16 294 1 262 241 176 0 chr10 88136997 88137105 -57452183 + MIR SINE MIR 81 207 -55 2543 87 0 0 chr10 88137340 88137651 -57451637 - AluSq SINE Alu -2 311 1 3740 173 55 7 chr10 88138140 88138396 -57450892 + MER50 LTR ERV1 1 243 -491 2265 120 0 0 chr10 88138396 88138697 -57450591 + AluSg1 SINE Alu 1 301 -8 3740 173 55 7 chr10 88138697 88139134 -57450154 + MER50 LTR ERV1 243 727 -7 240 312 88 0 chr10 88139196 88139321 -57449967 + MIR SINE MIR 126 261 -1 2052 109 0 68 chr10 88139573 88139884 -57449404 + AluSx SINE Alu 1 290 -22 1892 232 104 81 chr10 88140023 88140804 -57448484 + L1MC5 LINE L1 6277 7117 -844 2068 135 0 3 chr10 88140804 88141093 -57448195 - AluSx SINE Alu -24 288 1 1892 232 104 81 chr10 88141093 88141743 -57447545 + L1MC5 LINE L1 7117 7751 -210 5168 105 27 21 chr10 88141816 88142590 -57446698 + MER4E LTR ERV1 1 779 0 291 254 0 0 chr10 88143274 88143345 -57445943 + L2 LINE L2 2988 3058 -214 266 247 0 12 chr10 88143638 88143719 -57445569 + T-rich Low_complexity Low_complexity 3 82 0 3707 94 14 6 chr10 88143967 88144476 -57444812 + LTR10D LTR ERV1 1 513 0 1621 268 37 55 chr10 88144478 88145551 -57443737 + HERVI LTR ERV1 3 1132 -6653 37454 182 12 21 chr10 88145853 88149467 -57439821 + HERVI LTR ERV1 1144 4669 -3116 2507 68 7 0 chr10 88149467 88149774 -57439514 + AluY SINE Alu 1 309 -2 37454 182 12 21 chr10 88149774 88152847 -57436441 + HERVI LTR ERV1 4669 7769 -16 3628 107 12 0 chr10 88152860 88153367 -57435921 + LTR10D LTR ERV1 1 513 0 330 296 96 14 chr10 88153426 88153646 -57435642 - L1MEc LINE L1 -4622 1774 1537 427 223 117 53 chr10 88153829 88154035 -57435253 - L1MEc LINE L1 -4903 1302 1084 1739 156 48 38 chr10 88155220 88155591 -57433697 - THE1C LTR MaLR 0 375 1 916 219 66 47 chr10 88155623 88155949 -57433339 + MER66A LTR ERV1 170 438 -40 609 263 133 17 chr10 88156078 88156318 -57432970 + LTR16A1 LTR ERVL 190 457 0 2129 113 27 0 chr10 88156712 88157013 -57432275 + AluSx SINE Alu 2 310 -2 916 176 0 48 chr10 88157881 88157926 -57431362 - L1MB1 LINE L1 -1 6167 6121 708 200 0 0 chr10 88157926 88158051 -57431237 - FLAM_A SINE Alu -8 125 1 916 176 0 48 chr10 88158051 88158193 -57431095 - L1MB1 LINE L1 -47 6121 5989 210 256 0 58 chr10 88158437 88158523 -57430765 + CT-rich Low_complexity Low_complexity 2 82 0 190 241 93 0 chr10 88158640 88158694 -57430594 - MIR SINE MIR -116 92 34 602 183 61 0 chr10 88159162 88159277 -57430011 + MER63 DNA MER1_type 3 750 -86 257 289 0 0 chr10 88159276 88159328 -57429960 + MER63 DNA MER1_type 1006 1057 -4 * 2672 103 19 0 chr10 88159609 88159977 -57429311 + THE1C LTR MaLR 1 375 0 2150 108 0 10 chr10 88160895 88161183 -57428105 - AluSx SINE Alu -14 298 14 927 264 53 27 chr10 88161291 88161590 -57427698 + MLT1I LTR MaLR 85 391 -18 780 284 74 26 chr10 88162717 88162988 -57426300 + MLT1I LTR MaLR 104 387 -22 1676 151 10 50 chr10 88163483 88163782 -57425506 + AluJo SINE Alu 1 287 -25 192 77 0 0 chr10 88163785 88163811 -57425477 + (TGAA)n Simple_repeat Simple_repeat 4 29 0 2047 182 75 4 chr10 88164098 88164608 -57424680 - L1M4 LINE L1 -985 5555 5010 193 271 51 0 chr10 88164778 88164837 -57424451 + MIR3 SINE MIR 99 160 -48 241 269 0 0 chr10 88165570 88165622 -57423666 + L2 LINE L2 3262 3313 0 183 220 0 40 chr10 88165809 88165859 -57423429 - MIR SINE MIR -113 149 102 564 211 179 19 chr10 88165868 88166024 -57423264 - MER5A DNA MER1_type 0 189 9 277 154 19 0 chr10 88166251 88166303 -57422985 + L1M4 LINE L1 4702 4754 -1392 1511 157 139 0 chr10 88167048 88167322 -57421966 - AluJb SINE Alu 0 312 1 2413 81 0 0 chr10 88167362 88167659 -57421629 - AluY SINE Alu -14 297 1 1828 159 23 17 chr10 88168663 88169008 -57420280 - MLT2D LTR ERVL -67 347 1 1145 53 0 0 chr10 88169774 88169906 -57419382 + AluY SINE Alu 1 132 -179 257 160 0 0 chr10 88170360 88170410 -57418878 + L1M4 LINE L1 4420 4469 -1677 * 4002 205 54 14 chr10 88170405 88170677 -57418611 - L1MDa LINE L1 -2938 3602 3342 2090 139 0 0 chr10 88170677 88170978 -57418310 - AluSx SINE Alu -9 303 3 4002 205 54 14 chr10 88170978 88172651 -57416637 - L1MDa LINE L1 -3198 3342 1579 381 298 42 24 chr10 88172659 88172827 -57416461 + L1ME LINE L1 5600 5770 -351 691 251 50 0 chr10 88172975 88173154 -57416134 + MIR SINE MIR 75 262 0 276 30 0 0 chr10 88173364 88173397 -57415891 + (TA)n Simple_repeat Simple_repeat 1 33 0 330 269 62 102 chr10 88173799 88174055 -57415233 - L1ME LINE L1 -529 5592 5347 263 321 132 38 chr10 88174411 88174570 -57414718 + L3 LINE CR1 1020 1193 -384 561 236 43 14 chr10 88174805 88174945 -57414343 + MIR SINE MIR 117 260 -2 2854 171 22 32 chr10 88175584 88175966 -57413322 - MER67B LTR ERV1 0 661 286 2131 153 22 3 chr10 88175966 88176325 -57412963 - MER47A DNA MER2_type 0 366 1 2854 171 22 32 chr10 88176325 88176568 -57412720 - MER67B LTR ERV1 -375 286 42 217 248 46 64 chr10 88177417 88177526 -57411762 - MIR SINE MIR -43 219 113 6767 203 53 28 chr10 88177848 88177980 -57411308 - L1MB8 LINE L1 -6 6983 6856 1599 179 3 50 chr10 88177980 88178282 -57411006 - AluJb SINE Alu -24 288 1 6767 203 53 28 chr10 88178282 88179567 -57409721 - L1MB8 LINE L1 -133 6856 5604 2175 79 3 50 chr10 88179567 88179679 -57409609 + AluSc SINE Alu 21 137 -172 2290 85 4 0 chr10 88179679 88179982 -57409306 + AluSp SINE Alu 1 304 0 2175 79 3 50 chr10 88179982 88180169 -57409119 + AluSc SINE Alu 137 309 0 6767 203 53 28 chr10 88180169 88181366 -57407922 - L1MB8 LINE L1 -1385 5604 4306 906 137 0 0 chr10 88182391 88182515 -57406773 - FLAM_C SINE Alu -9 124 1 987 280 23 4 chr10 88183407 88183886 -57405402 - L1MB8 LINE L1 -2631 4326 3839 455 256 91 6 chr10 88183907 88184083 -57405205 - L1MB8 LINE L1 -6658 201 11 239 345 181 13 chr10 88184228 88184454 -57404834 + L3 LINE CR1 1276 1539 -38 2081 174 10 15 chr10 88184796 88185188 -57404100 - MLT1B LTR MaLR 0 390 1 1631 189 16 16 chr10 88186001 88186308 -57402980 + AluJo SINE Alu 1 307 -5 1264 129 0 5 chr10 88186466 88186652 -57402636 + AluSp SINE Alu 120 304 -9 489 324 106 61 chr10 88187063 88187677 -57401611 - L1M4 LINE L1 -1964 4182 3545 475 314 169 45 chr10 88187888 88188820 -57400468 - L1M4 LINE L1 -2883 3263 2217 841 123 19 32 chr10 88188934 88189088 -57400200 - L1MD1 LINE L1 -8 6234 6083 342 102 0 0 chr10 88189136 88189185 -57400103 - MER93b LTR ERV1 -324 49 1 189 0 0 0 chr10 88189221 88189242 -57400046 + (TG)n Simple_repeat Simple_repeat 1 21 0 183 42 0 0 chr10 88189241 88189265 -57400023 + (GA)n Simple_repeat Simple_repeat 1 24 0 * 1179 183 10 5 chr10 88189683 88189993 -57399295 + MLT1A1 LTR MaLR 5 365 0 2340 94 3 0 chr10 88190664 88190961 -57398327 + AluSp SINE Alu 9 306 -7 2196 148 22 3 chr10 88191867 88192224 -57397064 - THE1B LTR MaLR 0 364 1 23 33 0 0 chr10 88192582 88192612 -57396676 + AT_rich Low_complexity Low_complexity 1 30 0 316 221 125 15 chr10 88192634 88192770 -57396518 + L1ME LINE L1 5578 5728 -393 1278 229 43 3 chr10 88192877 88193179 -57396109 - MER58B DNA MER1_type -2 339 26 23 33 0 0 chr10 88193220 88193250 -57396038 + AT_rich Low_complexity Low_complexity 1 30 0 471 247 177 51 chr10 88193331 88193647 -57395641 + MLT1H LTR MaLR 190 545 -4 1220 204 4 8 chr10 88194250 88194490 -57394798 - MER8 DNA MER2_type 0 239 1 419 296 45 11 chr10 88194659 88194838 -57394450 - MIR SINE MIR -50 212 28 5238 194 40 22 chr10 88195579 88196291 -57392997 - L1MC1 LINE L1 -12 6321 5623 1779 163 30 9 chr10 88196291 88196623 -57392665 + MER44D DNA MER2_type 1 609 0 5238 194 40 22 chr10 88196623 88197655 -57391633 - L1MC1 LINE L1 -710 5623 4531 2144 132 0 3 chr10 88197655 88197951 -57391337 - AluSx SINE Alu -11 301 7 5238 194 40 22 chr10 88197951 88198295 -57390993 - L1MC1 LINE L1 -1802 4531 4195 366 255 230 12 chr10 88198456 88198617 -57390671 + MIR SINE MIR 13 208 -54 213 355 13 59 chr10 88201998 88202150 -57387138 - L2 LINE L2 -5 3308 3164 489 254 90 20 chr10 88202176 88202489 -57386799 + LTR33 LTR ERVL 1 364 -157 1356 227 104 34 chr10 88202578 88203050 -57386238 - MLT1D LTR MaLR 0 505 1 283 381 53 24 chr10 88203207 88203548 -57385740 - L2 LINE L2 -337 2977 2627 450 183 19 19 chr10 88204929 88205033 -57384255 + MLT2F LTR ERVL 41 144 -519 1048 217 167 53 chr10 88205199 88205434 -57383854 + MLT2B1 LTR ERVL 2 209 -311 180 0 0 0 chr10 88205434 88205454 -57383834 + (CATCT)n Simple_repeat Simple_repeat 1 20 0 1048 217 167 53 chr10 88205454 88205659 -57383629 + MLT2B1 LTR ERVL 209 520 0 1256 171 92 60 chr10 88205764 88206045 -57383243 + AluJo SINE Alu 1 290 -22 544 267 143 53 chr10 88206856 88207212 -57382076 - L2 LINE L2 -1 3312 2925 183 384 53 8 chr10 88207803 88207936 -57381352 + L2 LINE L2 2828 2966 -306 2298 71 7 3 chr10 88208188 88208503 -57380785 + AluSp SINE Alu 1 316 0 277 278 82 60 chr10 88208762 88209043 -57380245 - L1ME LINE L1 -366 5755 5469 262 231 0 22 chr10 88209069 88209160 -57380128 + L1ME4a LINE L1 5767 5855 -266 341 242 127 25 chr10 88209213 88209370 -57379918 + L1ME4a LINE L1 5947 6119 -2 1474 214 44 7 chr10 88209443 88209737 -57379551 + AluJo SINE Alu 1 305 -7 2393 58 10 3 chr10 88209941 88210236 -57379052 + AluY SINE Alu 1 297 -14 421 246 55 82 chr10 88210500 88210683 -57378605 - MER5B DNA MER1_type 0 178 1 1056 220 33 36 chr10 88210810 88211211 -57378077 + LTR10B LTR ERV1 112 540 -7 3506 198 23 82 chr10 88211211 88212241 -57377047 + LTR5 LTR ERVK 1 969 0 633 188 26 19 chr10 88212664 88212818 -57376470 + MER104 DNA Tc2 1 155 -25 4375 248 92 76 chr10 88212840 88213235 -57376053 + L2 LINE L2 343 730 -2584 2195 127 3 0 chr10 88213235 88213527 -57375761 - AluSx SINE Alu -19 293 1 4375 248 92 76 chr10 88213527 88215313 -57373975 + L2 LINE L2 730 2768 -546 804 196 191 0 chr10 88215827 88216016 -57373272 + AluJb SINE Alu 85 309 -3 464 252 156 29 chr10 88216189 88216427 -57372861 + L2 LINE L2 1576 1843 -1471 516 288 77 30 chr10 88216427 88216660 -57372628 - MLT1J LTR MaLR 0 511 268 248 275 83 28 chr10 88216799 88216908 -57372380 + MLT1H LTR MaLR 145 259 -290 1342 233 180 30 chr10 88217328 88217856 -57371432 + L2 LINE L2 1843 2449 -865 2167 72 0 0 chr10 88217878 88218156 -57371132 - L1PA8 LINE L1 -20 6152 5875 872 281 23 4 chr10 88218201 88218464 -57370824 + L1ME3 LINE L1 5762 6029 -133 236 276 0 0 chr10 88218478 88218536 -57370752 + (CATATA)n Simple_repeat Simple_repeat 2 59 0 611 239 71 119 chr10 88218735 88218900 -57370388 + L2 LINE L2 2540 2711 -603 306 50 0 0 chr10 88218900 88218940 -57370348 + (TC)n Simple_repeat Simple_repeat 2 41 0 611 239 71 119 chr10 88218940 88218953 -57370335 + L2 LINE L2 2711 2723 -591 2145 123 0 13 chr10 88218953 88219253 -57370035 - AluSx SINE Alu -16 296 1 611 239 71 119 chr10 88219253 88219341 -57369947 + L2 LINE L2 2723 2794 -520 4089 104 238 23 chr10 88219361 88220634 -57368654 + pTR5 LTR ERV1 743 2438 0 220 308 23 39 chr10 88220640 88220770 -57368518 + L2 LINE L2 3013 3140 -173 1835 248 23 41 chr10 88220786 88220951 -57368337 + MLT1H1 LTR MaLR 27 194 -361 2235 106 0 10 chr10 88220951 88221253 -57368035 - AluY SINE Alu -12 299 1 1835 248 23 41 chr10 88221253 88221619 -57367669 + MLT1H1 LTR MaLR 194 548 -7 1855 145 31 0 chr10 88221752 88222042 -57367246 + AluSg SINE Alu 1 299 -11 2175 112 0 7 chr10 88222607 88222901 -57366387 + AluSq SINE Alu 3 294 -19 27145 118 54 68 chr10 88222907 88228756 -57360532 + L1PA8 LINE L1 2 5764 -408 1157 109 29 0 chr10 88228744 88228919 -57360369 + L1P LINE L1 3492 3671 -2475 * 3068 82 7 17 chr10 88228919 88229328 -57359960 + L1PA8 LINE L1 5762 6171 -1 209 136 0 23 chr10 88229473 88229517 -57359771 + (GGGAGA)n Simple_repeat Simple_repeat 1 43 0 2417 54 7 3 chr10 88229647 88229942 -57359346 - AluY SINE Alu -15 296 1 236 184 69 23 chr10 88230361 88230448 -57358840 + L1MEd LINE L1 45 135 -5984 2097 115 16 44 chr10 88230740 88230875 -57358413 + AluSx SINE Alu 1 138 -174 2511 68 0 10 chr10 88230875 88231185 -57358103 + AluY SINE Alu 2 308 -3 2097 115 16 44 chr10 88231185 88231370 -57357918 + AluSx SINE Alu 138 312 0 4524 185 39 32 chr10 88231454 88232519 -57356769 - MER69 DNA AcHobo -4 2522 1451 815 346 18 18 chr10 88232682 88233011 -57356277 + L1M3a LINE L1 1 329 -5626 4336 239 98 9 chr10 88234168 88235488 -57353800 + L1M3a LINE L1 369 1806 -4228 1897 93 0 0 chr10 88235491 88235738 -57353550 + L1PB4 LINE L1 -111 135 -5899 21406 31 0 0 chr10 88235738 88238932 -57350356 + L1PA4 LINE L1 2964 6155 0 8681 196 29 15 chr10 88238965 88241056 -57348232 + L1PB4 LINE L1 1820 3950 -2084 30705 117 14 57 chr10 88241107 88247541 -57341747 - L1PA7 LINE L1 0 6154 9 261 212 0 94 chr10 88247610 88247695 -57341593 + MER4B-int LTR ERV1 2618 2694 -3252 746 180 8 16 chr10 88247753 88247881 -57341407 + FLAM_C SINE Alu 5 131 -12 2349 157 18 27 chr10 88247895 88248058 -57341230 + MSTB1 LTR MaLR 36 199 -233 2435 50 3 20 chr10 88248058 88248357 -57340931 + AluY SINE Alu 4 297 -14 2349 157 18 27 chr10 88248357 88248594 -57340694 + MSTB1 LTR MaLR 199 432 0 484 224 0 26 chr10 88248597 88248713 -57340575 + MER4B-int LTR ERV1 881 993 -4130 750 256 99 41 chr10 88248722 88248964 -57340324 + MER34C LTR ERV1 159 414 -171 1598 224 68 65 chr10 88248964 88249519 -57339769 + MER4B-int LTR ERV1 1855 2407 -4618 2256 78 7 3 chr10 88249519 88249815 -57339473 - AluY SINE Alu -14 297 1 1598 224 68 65 chr10 88249815 88250009 -57339279 + MER4B-int LTR ERV1 2407 4158 -2867 424 188 0 34 chr10 88250104 88250221 -57339067 + MER4B-int LTR ERV1 1838 1950 -3173 2473 203 26 44 chr10 88250279 88251018 -57338270 + MER4B-int LTR ERV1 2790 4632 -1951 394 203 0 14 chr10 88251024 88251098 -57338190 + MER4B-int LTR ERV1 5169 5241 -1090 5634 156 29 22 chr10 88251098 88252573 -57336715 + L1PB4 LINE L1 4544 6043 -1 2675 128 33 62 chr10 88252573 88252839 -57336449 + MER4B-int LTR ERV1 5231 5503 -945 1641 92 26 4 chr10 88252839 88253067 -57336221 - AluSc SINE Alu -23 286 54 2675 128 33 62 chr10 88253067 88253341 -57335947 + MER4B-int LTR ERV1 5503 5806 -642 909 176 80 1 chr10 88253389 88253585 -57335703 + LTR47A LTR ERVL 243 452 0 7277 151 39 4 chr10 88253585 88255748 -57333540 + L1MA4 LINE L1 4058 6294 -6 26 30 0 0 chr10 88255751 88255784 -57333504 + AT_rich Low_complexity Low_complexity 1 33 0 35 63 0 0 chr10 88256204 88256267 -57333021 + AT_rich Low_complexity Low_complexity 1 63 0 2151 125 0 0 chr10 88256285 88256581 -57332707 - AluSx SINE Alu -16 296 1 694 273 122 21 chr10 88256866 88257244 -57332044 - L1M4 LINE L1 -1711 4435 4020 317 274 70 38 chr10 88258928 88259085 -57330203 - MIR3 SINE MIR -7 201 40 239 346 188 5 chr10 88259198 88259400 -57329888 + MIR SINE MIR 4 242 -20 2023 164 39 6 chr10 88259492 88259827 -57329461 + MER7A DNA MER2_type 2 345 -1 247 188 0 0 chr10 88263243 88263291 -57325997 - L1MC4 LINE L1 -1343 6699 6652 263 319 217 54 chr10 88263699 88264035 -57325253 + L2 LINE L2 2882 3272 0 1033 199 72 29 chr10 88264094 88264371 -57324917 + MLT1C LTR MaLR 34 322 -145 6445 138 134 101 chr10 88264386 88266028 -57323260 + pTR5 LTR ERV1 743 2438 0 570 240 16 16 chr10 88266029 88266163 -57323125 + MLT1C LTR MaLR 349 466 -1 335 283 38 0 chr10 88266350 88266456 -57322832 - MIR SINE MIR -53 209 100 192 289 330 6 chr10 88267866 88268039 -57321249 - MIR SINE MIR -13 249 21 25 75 0 0 chr10 88270499 88270552 -57318736 + AT_rich Low_complexity Low_complexity 1 53 0 15614 59 6 0 chr10 88270560 88273178 -57316110 - L1PA6 LINE L1 -5 6149 3500 252 326 84 21 chr10 88273201 88273440 -57315848 - L1ME LINE L1 -322 5848 5595 3469 156 52 3 chr10 88273468 88274070 -57315218 + L1MA5 LINE L1 5670 6300 0 563 208 58 8 chr10 88274365 88274503 -57314785 + L1M2 LINE L1 11 218 -6631 7892 220 73 26 chr10 88274513 88278154 -57311134 + L1M2 LINE L1 1709 5598 -1250 1773 164 0 38 chr10 88278304 88278487 -57310801 - AluJb SINE Alu -7 305 138 249 57 0 0 chr10 88278487 88278522 -57310766 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1773 164 0 38 chr10 88278522 88278655 -57310633 - AluJb SINE Alu -174 138 1 818 198 22 50 chr10 88278676 88278858 -57310430 - MER20 DNA MER1_type -42 177 1 1065 215 4 28 chr10 88279421 88279561 -57309727 + L1MA5A LINE L1 4309 4442 -2406 2664 139 57 57 chr10 88279561 88280072 -57309216 + MER9 LTR ERVK 1 511 0 1065 215 4 28 chr10 88280072 88280182 -57309106 + L1MA5A LINE L1 4442 4553 -2295 274 204 57 11 chr10 88280182 88280270 -57309018 - L1 LINE L1 -2170 3976 3885 5641 168 28 4 chr10 88280540 88281904 -57307384 + L1MA5A LINE L1 5603 6999 0 4660 151 36 4 chr10 88281925 88282733 -57306555 - L1PA13 LINE L1 -7 6156 5323 * 11365 96 3 1 chr10 88282721 88282733 -57306555 - L1PA13 LINE L1 -1058 5088 5078 5868 83 12 0 chr10 88282733 88283978 -57305310 - L1PA8 LINE L1 -6 6166 4983 11365 96 3 1 chr10 88283978 88285547 -57303741 - L1PA13 LINE L1 -1068 5078 3503 1936 169 31 8 chr10 88285548 88285938 -57303350 - L1P LINE L1 -815 5331 4933 494 348 5 5 chr10 88286189 88286373 -57302915 - MLT1F-int LTR MaLR -488 883 700 716 265 80 31 chr10 88286630 88287080 -57302208 - MLT1F-int LTR MaLR -776 595 4 1138 252 66 87 chr10 88287081 88287609 -57301679 - MLT1F LTR MaLR 0 542 26 1735 207 70 73 chr10 88288096 88288778 -57300510 - L1MC5 LINE L1 -608 7353 6698 646 238 109 12 chr10 88288784 88289032 -57300256 + L1ME LINE L1 4264 4535 -1611 * 26208 72 5 5 chr10 88289031 88292514 -57296774 + L1P LINE L1 3 3487 -2659 17663 30 6 0 chr10 88292719 88295465 -57293823 + L1PA4 LINE L1 3401 6153 -2 2128 232 21 18 chr10 88295473 88296042 -57293246 + L1ME LINE L1 4523 5093 -1053 647 87 11 0 chr10 88296416 88296508 -57292780 - L1PA16 LINE L1 -9 6157 6065 2050 104 0 52 chr10 88296513 88296660 -57292628 + AluSx SINE Alu 1 154 -158 2425 74 0 10 chr10 88296660 88296970 -57292318 + AluY SINE Alu 1 307 -4 2050 104 0 52 chr10 88296970 88297148 -57292140 + AluSx SINE Alu 154 309 -3 1014 196 0 6 chr10 88297148 88297327 -57291961 + AluJb SINE Alu 134 311 -1 222 171 0 0 chr10 88297641 88297676 -57291612 - L3 LINE CR1 -607 970 936 2439 143 64 0 chr10 88298716 88299109 -57290179 + MSTB LTR MaLR 2 419 -7 490 145 0 0 chr10 88299511 88299580 -57289708 - AluJo SINE Alu -163 149 81 289 265 48 54 chr10 88299700 88299871 -57289417 + MIR SINE MIR 42 214 -48 539 174 11 0 chr10 88299875 88299967 -57289321 + MLT1F LTR MaLR 1 93 -449 1651 164 43 16 chr10 88300246 88300550 -57288738 - AluJb SINE Alu 0 312 1 31 0 0 0 chr10 88300553 88300584 -57288704 + AT_rich Low_complexity Low_complexity 1 31 0 489 306 59 0 chr10 88300766 88300936 -57288352 + MIR SINE MIR 19 198 -64 2290 115 0 0 chr10 88301452 88301756 -57287532 + AluSx SINE Alu 1 304 -8 262 245 109 98 chr10 88301777 88301961 -57287327 + L1ME LINE L1 5539 5726 -395 1081 216 76 30 chr10 88302372 88302700 -57286588 + L1ME3A LINE L1 17 359 -6064 4874 117 38 8 chr10 88302921 88303702 -57285586 - SVA Other Other -550 836 32 1170 189 148 30 chr10 88304241 88304511 -57284777 - AluJo SINE Alu 0 302 1 3620 147 21 2 chr10 88305337 88306095 -57283193 - L1M2 LINE L1 -743 5403 4787 195 276 35 0 chr10 88306766 88306824 -57282464 + MIR3 SINE MIR 104 163 -45 1538 175 21 14 chr10 88306825 88307110 -57282178 + AluJb SINE Alu 1 287 -25 191 224 0 20 chr10 88307417 88307466 -57281822 - MIR SINE MIR -112 150 103 186 80 0 0 chr10 88307977 88308002 -57281286 + MIR SINE MIR 120 144 -64 339 347 110 40 chr10 88308359 88308685 -57280603 + L2 LINE L2 2188 2536 -778 904 279 49 16 chr10 88308784 88309028 -57280260 + MLT1E LTR MaLR 1 252 -341 21 0 0 0 chr10 88309794 88309815 -57279473 + AT_rich Low_complexity Low_complexity 1 21 0 286 265 47 90 chr10 88312375 88312654 -57276634 + L1ME3A LINE L1 1775 2041 -4890 2407 131 15 38 chr10 88312700 88313097 -57276191 - MLT1B LTR MaLR -1 389 2 1924 137 0 37 chr10 88313313 88313612 -57275676 - AluSx SINE Alu -24 288 1 1283 231 54 10 chr10 88313616 88313911 -57275377 - AluJo SINE Alu -1 311 4 2228 59 3 3 chr10 88315440 88315730 -57273558 - L1P LINE L1 -1416 4730 4441 1539 273 20 36 chr10 88315743 88316355 -57272933 + L1ME3A LINE L1 3238 3839 -3102 369 321 20 25 chr10 88319703 88319899 -57269389 - MIR SINE MIR -65 197 3 278 247 0 13 chr10 88319913 88319990 -57269298 + MIR SINE MIR 65 140 -122 253 258 16 0 chr10 88320998 88321060 -57268228 - AluSg/x SINE Alu -131 171 109 237 139 266 51 chr10 88322817 88322896 -57266392 + L2 LINE L2 3212 3307 -6 320 284 17 17 chr10 88323788 88323904 -57265384 + L1ME3A LINE L1 5829 5944 -997 569 239 81 58 chr10 88323957 88324216 -57265072 + L1ME3A LINE L1 6696 6960 -5 4786 214 14 10 chr10 88325032 88326540 -57262748 + L1PBa LINE L1 2188 3758 -3104 22 56 0 0 chr10 88329485 88329521 -57259767 + AT_rich Low_complexity Low_complexity 1 36 0 1678 174 3 21 chr10 88329521 88329808 -57259480 + AluJo SINE Alu 1 282 -30 185 0 0 39 chr10 88329812 88329838 -57259450 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 973 173 0 69 chr10 88330248 88330450 -57258838 - AluJb SINE Alu -5 307 120 619 259 0 6 chr10 88330465 88330639 -57258649 - AluY SINE Alu -128 183 11 223 291 0 0 chr10 88331223 88331278 -57258010 + L2 LINE L2 2997 3051 -221 813 230 56 14 chr10 88331358 88331571 -57257717 + MIR SINE MIR 15 236 -26 461 271 63 20 chr10 88331572 88331816 -57257472 + MLT1G LTR MaLR 28 282 -308 1734 133 95 43 chr10 88332536 88332882 -57256406 + L1MC/D LINE L1 5457 5820 -524 2465 99 8 8 chr10 88332887 88333242 -57256046 + THE1A LTR MaLR 1 355 0 1430 179 6 58 chr10 88333272 88333584 -57255704 + AluJo SINE Alu 5 300 -12 3329 112 4 4 chr10 88333584 88334047 -57255241 + LTR10E LTR ERV1 171 633 0 353 319 43 28 chr10 88334068 88334209 -57255079 + L2 LINE L2 3098 3240 -32 288 313 0 0 chr10 88334230 88334313 -57254975 - MIR SINE MIR -2 260 178 1876 104 0 15 chr10 88334515 88334775 -57254513 - AluSx SINE Alu -50 262 7 375 146 155 29 chr10 88334801 88334904 -57254384 - L1MA4 LINE L1 -1 6299 6184 2117 124 0 0 chr10 88335360 88335659 -57253629 + AluSx SINE Alu 14 312 0 216 0 0 0 chr10 88335704 88335728 -57253560 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 2087 134 7 7 chr10 88335799 88336106 -57253182 - AluSx SINE Alu -5 307 1 32 0 0 0 chr10 88336442 88336474 -57252814 + AT_rich Low_complexity Low_complexity 1 32 0 2284 94 0 10 chr10 88337720 88338019 -57251269 - AluSq SINE Alu -15 298 3 23 92 0 0 chr10 88338132 88338197 -57251091 + AT_rich Low_complexity Low_complexity 1 65 0 668 202 14 67 chr10 88338319 88338715 -57250573 - AluSx SINE Alu 0 396 16 676 106 26 18 chr10 88339395 88339529 -57249759 + FLAM_C SINE Alu 5 139 0 2198 120 3 0 chr10 88339638 88339937 -57249351 + AluSq SINE Alu 1 300 -13 1184 94 0 0 chr10 88339937 88340111 -57249177 + AluSg/x SINE Alu 134 307 0 254 258 172 0 chr10 88340179 88340307 -57248981 - MIR SINE MIR -66 196 47 1148 120 0 6 chr10 88342265 88342432 -57246856 - AluSg/x SINE Alu -7 305 140 505 223 78 36 chr10 88343498 88343664 -57245624 - MIR SINE MIR -11 251 79 2332 94 7 0 chr10 88343947 88344246 -57245042 - AluSx SINE Alu -11 301 1 705 291 98 18 chr10 88344320 88344784 -57244504 - L1P4 LINE L1 -474 5692 5173 2122 133 3 19 chr10 88344785 88345101 -57244187 + AluSx SINE Alu 2 312 0 1491 287 119 30 chr10 88345805 88347146 -57242142 + L2 LINE L2 1763 3237 -35 227 313 24 0 chr10 88348226 88348327 -57240961 - MIR SINE MIR -62 146 46 2332 157 87 2 chr10 88349562 88350008 -57239280 - MER31A LTR ERV1 -1 484 1 2123 104 11 7 chr10 88351893 88352173 -57237115 + AluSx SINE Alu 1 281 -31 351 44 0 0 chr10 88352190 88352235 -57237053 + (TC)n Simple_repeat Simple_repeat 2 46 0 198 103 0 0 chr10 88352247 88352276 -57237012 + (CA)n Simple_repeat Simple_repeat 2 30 0 637 247 95 5 chr10 88352277 88352467 -57236821 + L1MC4a LINE L1 5701 5907 -1901 1952 122 12 86 chr10 88352617 88352954 -57236334 - AluSx SINE Alu 0 312 1 981 83 94 66 chr10 88352980 88353161 -57236127 + MLT1C LTR MaLR 1 186 -281 746 137 8 8 chr10 88354955 88355079 -57234209 + AluSq/x SINE Alu 13 136 -177 2170 125 14 0 chr10 88355082 88355378 -57233910 + AluSx SINE Alu 4 303 -9 26 0 0 0 chr10 88355565 88355591 -57233697 + AT_rich Low_complexity Low_complexity 1 26 0 2190 81 6 69 chr10 88355751 88356071 -57233217 + AluSq SINE Alu 1 300 -13 278 287 125 7 chr10 88356204 88356340 -57232948 + L2 LINE L2 3161 3312 -1 228 35 0 0 chr10 88357392 88357421 -57231867 + (CA)n Simple_repeat Simple_repeat 1 29 0 190 256 0 0 chr10 88358620 88358663 -57230625 - L2 LINE L2 -24 3248 3206 2186 120 0 0 chr10 88359431 88359730 -57229558 + AluSg SINE Alu 6 304 -6 1248 162 10 10 chr10 88359913 88360110 -57229178 + AluJo SINE Alu 86 282 -30 1824 140 0 4 chr10 88360555 88360846 -57228442 + AluSx SINE Alu 22 311 0 200 167 0 42 chr10 88362439 88362487 -57226801 + A-rich Low_complexity Low_complexity 1 46 0 26 30 0 0 chr10 88362888 88362921 -57226367 + AT_rich Low_complexity Low_complexity 1 33 0 546 126 0 29 chr10 88363304 88363407 -57225881 + FLAM_A SINE Alu 42 141 -1 405 39 0 0 chr10 88363499 88363550 -57225738 + (TG)n Simple_repeat Simple_repeat 1 51 0 2211 122 0 3 chr10 88363722 88364025 -57225263 - AluSx SINE Alu -10 302 1 318 229 12 12 chr10 88364028 88364111 -57225177 - L1M LINE L1 -2412 5396 5314 2173 105 31 3 chr10 88364885 88365179 -57224109 - AluSg SINE Alu -8 302 1 1401 159 69 153 chr10 88365310 88365417 -57223871 + MLT2D LTR ERVL 1 115 -299 1926 153 0 20 chr10 88365417 88365718 -57223570 - AluJb SINE Alu -17 295 1 1401 159 69 153 chr10 88365718 88366062 -57223226 + MLT2D LTR ERVL 115 414 0 250 287 32 43 chr10 88366796 88366890 -57222398 - L2 LINE L2 -17 3296 3204 810 205 0 0 chr10 88366918 88367040 -57222248 + FLAM_C SINE Alu 5 126 -17 2345 95 0 3 chr10 88367046 88367351 -57221937 + AluSx SINE Alu 1 304 -8 238 321 53 21 chr10 88367366 88367556 -57221732 + L1ME LINE L1 5531 5726 -395 1258 220 96 28 chr10 88367967 88368394 -57220894 + L1MCc LINE L1 17 472 -5951 656 219 263 9 chr10 88368576 88368896 -57220392 + L1MCc LINE L1 818 1218 -5205 288 240 10 10 chr10 88368908 88369004 -57220284 + L1MCc LINE L1 1616 1711 -5230 23 33 0 0 chr10 88372846 88372876 -57216412 + AT_rich Low_complexity Low_complexity 1 30 0 1032 146 64 109 chr10 88373354 88373574 -57215714 + MER63A DNA MER1_type 1 210 0 1181 176 33 0 chr10 88373849 88374059 -57215229 + MER20 DNA MER1_type 3 219 0 2187 61 6 54 chr10 88375179 88375492 -57213796 + AluY SINE Alu 1 298 -13 23 0 0 0 chr10 88376192 88376215 -57213073 + AT_rich Low_complexity Low_complexity 1 23 0 6568 99 16 11 chr10 88376220 88377170 -57212118 - L1MA3 LINE L1 0 6305 5351 10107 173 17 8 chr10 88377186 88379087 -57210201 - L1MA3 LINE L1 -1072 5074 3158 648 216 9 0 chr10 88379096 88379212 -57210076 + FLAM_C SINE Alu 2 118 -15 198 0 0 0 chr10 88379213 88379235 -57210053 + (CA)n Simple_repeat Simple_repeat 2 23 0 25 31 0 0 chr10 88379534 88379566 -57209722 + AT_rich Low_complexity Low_complexity 1 32 0 24 32 0 0 chr10 88379651 88379682 -57209606 + AT_rich Low_complexity Low_complexity 1 31 0 328 258 57 50 chr10 88379737 88379896 -57209392 + L1MC4 LINE L1 7695 7854 -188 242 250 0 0 chr10 88379915 88379979 -57209309 + GA-rich Low_complexity Low_complexity 1 64 0 730 115 0 35 chr10 88380114 88380227 -57209061 + AluJo SINE Alu 28 136 -176 1420 207 51 14 chr10 88380227 88380502 -57208786 + AluJo SINE Alu 2 286 -16 836 318 107 19 chr10 88380539 88381005 -57208283 - MLT1J LTR MaLR -2 509 3 339 118 0 0 chr10 88381201 88381252 -57208036 - MADE1 DNA Mariner 0 80 30 288 190 0 35 chr10 88381257 88381315 -57207973 - AluJo SINE Alu -160 142 87 1179 204 0 19 chr10 88381318 88381534 -57207754 - AluJo SINE Alu -94 218 7 307 67 22 0 chr10 88381535 88381580 -57207708 - MADE1 DNA Mariner -34 46 1 2678 145 29 7 chr10 88382713 88383134 -57206154 - MSTB1 LTR MaLR 0 432 3 1809 198 82 49 chr10 88383802 88383846 -57205442 + MLT1D LTR MaLR 1 42 -463 2298 69 253 8 chr10 88383846 88384206 -57205082 - LTR7 LTR ERV1 -2 448 1 1809 198 82 49 chr10 88384206 88384609 -57204679 + MLT1D LTR MaLR 42 430 -75 1124 231 44 0 chr10 88384609 88384838 -57204450 - MER8 DNA MER2_type 0 239 1 2357 87 0 10 chr10 88384841 88385141 -57204147 - AluSg SINE Alu -13 297 1 1809 198 82 49 chr10 88385141 88385177 -57204111 + MLT1D LTR MaLR 431 505 0 292 346 47 0 chr10 88385435 88385562 -57203726 - MIR SINE MIR -82 180 48 340 303 41 14 chr10 88386664 88386809 -57202479 - MIR SINE MIR 0 262 114 1548 203 3 20 chr10 88386899 88387195 -57202093 + AluJo SINE Alu 1 291 -21 408 328 122 4 chr10 88387262 88387485 -57201803 + MIR SINE MIR 6 251 -11 180 152 0 0 chr10 88388077 88388110 -57201178 + (TG)n Simple_repeat Simple_repeat 1 33 0 2342 102 0 0 chr10 88388480 88388784 -57200504 - AluSq SINE Alu -9 304 1 2315 154 5 19 chr10 88389259 88389629 -57199659 - MLT1A1 LTR MaLR 0 365 1 485 296 91 28 chr10 88390557 88390844 -57198444 + L1ME4a LINE L1 5523 5827 -294 28 29 0 0 chr10 88391573 88391608 -57197680 + AT_rich Low_complexity Low_complexity 1 35 0 26 0 0 0 chr10 88392446 88392472 -57196816 + AT_rich Low_complexity Low_complexity 1 26 0 303 263 30 53 chr10 88392852 88392985 -57196303 + MIR SINE MIR 22 151 -111 4713 107 10 3 chr10 88393677 88394285 -57195003 + LTR9 LTR ERV1 1 612 0 478 319 81 17 chr10 88395028 88395263 -57194025 + MIR SINE MIR 13 262 0 5430 142 45 44 chr10 88395306 88396357 -57192931 + L1MC2 LINE L1 5282 6333 -11 417 177 213 7 chr10 88396360 88396501 -57192787 + HAL1 LINE L1 1417 1586 -921 21 57 0 0 chr10 88396516 88396551 -57192737 + AT_rich Low_complexity Low_complexity 1 35 0 191 387 84 60 chr10 88396687 88396890 -57192398 - L2 LINE L2 -338 2976 2759 1151 227 4 13 chr10 88396890 88397115 -57192173 - MER58A DNA MER1_type 0 224 2 191 387 84 60 chr10 88397115 88397278 -57192010 - L2 LINE L2 -555 2759 2601 1942 160 11 42 chr10 88397533 88397915 -57191373 + LTR55 LTR ERV 4 373 -175 376 200 12 0 chr10 88397956 88398036 -57191252 + LTR55 LTR ERV 461 541 -7 337 337 95 41 chr10 88398077 88398466 -57190822 - L2 LINE L2 -1100 2214 1805 200 357 83 9 chr10 88398905 88399031 -57190257 + MIR3 SINE MIR 12 146 -82 3249 167 4 15 chr10 88399178 88399718 -57189570 + MER44D DNA MER2_type 4 592 -13 238 302 10 18 chr10 88399741 88399835 -57189453 - MER5B DNA MER1_type -3 175 92 387 273 73 36 chr10 88400378 88400543 -57188745 - MIR SINE MIR -74 188 18 599 303 54 25 chr10 88400634 88400875 -57188413 + L1M4 LINE L1 14 261 -6281 185 276 121 0 chr10 88401299 88401357 -57187931 - L2 LINE L2 -19 3253 3189 183 80 0 0 chr10 88402285 88402310 -57186978 + (TGAA)n Simple_repeat Simple_repeat 2 26 0 223 373 42 0 chr10 88402827 88402945 -57186343 + MIR SINE MIR 87 209 -53 600 280 6 6 chr10 88404944 88405101 -57184187 - AluSx SINE Alu -155 157 1 550 307 28 11 chr10 88405148 88405324 -57183964 - MIR SINE MIR -70 192 14 718 208 97 96 chr10 88405447 88405590 -57183698 + MLT1C LTR MaLR 34 175 -292 1663 166 0 4 chr10 88405590 88405867 -57183421 + AluJb SINE Alu 26 301 -11 2041 152 0 3 chr10 88405871 88406173 -57183115 + AluSx SINE Alu 1 301 -11 718 208 97 96 chr10 88406173 88406397 -57182891 + MLT1C LTR MaLR 177 377 -90 441 291 30 111 chr10 88406541 88406775 -57182513 - L2 LINE L2 -43 3229 3015 1393 168 122 8 chr10 88406840 88407102 -57182186 - MLT1C LTR MaLR 0 467 176 2126 132 3 0 chr10 88407103 88407398 -57181890 - AluSx SINE Alu -16 296 1 1437 186 80 17 chr10 88407910 88408363 -57180925 + MLT1F LTR MaLR 1 567 0 273 57 0 0 chr10 88408525 88408560 -57180728 + (TC)n Simple_repeat Simple_repeat 2 36 0 419 97 61 0 chr10 88408563 88408677 -57180611 + (TA)n Simple_repeat Simple_repeat 2 122 0 1222 116 6 12 chr10 88408716 88408916 -57180372 - AluSg/x SINE Alu 0 308 110 271 254 0 0 chr10 88409057 88409112 -57180176 + MSTD LTR MaLR 218 272 -124 1778 170 0 4 chr10 88409270 88409546 -57179742 - AluJb SINE Alu -32 280 6 2130 106 0 50 chr10 88409601 88409922 -57179366 - AluSx SINE Alu -7 305 1 1095 260 116 16 chr10 88410445 88410895 -57178393 + L1MC4 LINE L1 7547 8041 -1 219 200 0 0 chr10 88411470 88411525 -57177763 - L2 LINE L2 -304 2968 2914 2329 90 0 0 chr10 88412512 88412801 -57176487 + AluSx SINE Alu 1 289 -23 2377 115 0 0 chr10 88413374 88413686 -57175602 + AluSq SINE Alu 1 312 -1 29428 33 3 0 chr10 88414313 88419194 -57170094 + L1PA4 LINE L1 1034 5927 -228 2922 235 49 6 chr10 88419521 88420593 -57168695 + L1ME1 LINE L1 1002 2208 -4176 1423 206 67 6 chr10 88420602 88420946 -57168342 - MLT1A1 LTR MaLR 0 365 1 4729 228 68 16 chr10 88420947 88423002 -57166286 + L1ME1 LINE L1 4241 6397 -5 4828 236 114 7 chr10 88423012 88423877 -57165411 + L1M3 LINE L1 3437 4208 -1970 1911 154 12 45 chr10 88423877 88424280 -57165008 + MLT1B LTR MaLR 1 390 0 4828 236 114 7 chr10 88424280 88425350 -57163938 + L1M3 LINE L1 4208 5586 -592 1264 99 47 28 chr10 88425344 88425600 -57163688 - L1P4 LINE L1 -687 5476 5217 * 4268 121 5 9 chr10 88425601 88426254 -57163034 + L1PA13 LINE L1 5512 6161 -2 777 204 81 16 chr10 88426254 88426440 -57162848 + L1M3 LINE L1 5571 5768 -412 2158 134 24 53 chr10 88426441 88426815 -57162473 + Tigger2 DNA MER2_type 2356 2718 0 551 289 105 34 chr10 88427061 88427460 -57161828 - MER101 LTR ERV1 -64 410 39 234 248 172 51 chr10 88428293 88428450 -57160838 + HAL1 LINE L1 2222 2397 -110 201 261 0 0 chr10 88428764 88428810 -57160478 + CT-rich Low_complexity Low_complexity 1 46 0 1208 290 62 20 chr10 88428864 88429267 -57160021 + LTR16A LTR ERVL 17 436 -14 2297 97 0 3 chr10 88429306 88429604 -57159684 + AluSc SINE Alu 1 297 -12 224 270 18 35 chr10 88430001 88430167 -57159121 - L2 LINE L2 -4 3309 3069 336 245 71 71 chr10 88430773 88430957 -57158331 + L1MEd LINE L1 916 1099 -5020 608 316 35 20 chr10 88430999 88431241 -57158047 - MIR SINE MIR 0 262 18 986 205 224 64 chr10 88432521 88433030 -57156258 + MLT1E1 LTR MaLR 1 654 0 285 148 136 23 chr10 88434881 88434969 -57154319 - LTR50 LTR ERVL 0 795 698 979 207 18 64 chr10 88435032 88435312 -57153976 - MER31B LTR ERV1 -58 408 142 3570 140 83 20 chr10 88435312 88436035 -57153253 - LTR1B LTR ERV1 0 785 1 651 170 14 54 chr10 88436035 88436177 -57153111 - MER31A LTR ERV1 -349 136 1 1006 256 171 11 chr10 88436178 88436709 -57152579 - LTR50 LTR ERVL -99 696 1 2077 181 12 12 chr10 88436807 88437210 -57152078 + MER57A LTR ERV1 1 403 0 1462 174 81 59 chr10 88437733 88438140 -57151148 + MER34C LTR ERV1 165 580 -5 4088 77 5 16 chr10 88438226 88438715 -57150573 - MER41A LTR ERV1 0 554 70 2548 85 65 0 chr10 88438715 88439069 -57150219 - MER51B LTR ERV1 0 377 1 4088 77 5 16 chr10 88439069 88439139 -57150149 - MER41A LTR ERV1 -484 70 1 1760 168 83 14 chr10 88439872 88440235 -57149053 + LTR8A LTR ERV1 1 388 -339 289 100 20 20 chr10 88440239 88440289 -57148999 - HUERS-P1 LTR ERV1 -3348 1532 1483 * 337 200 40 13 chr10 88440259 88440334 -57148954 - HUERS-P1 LTR ERV1 -5487 844 768 2172 142 0 0 chr10 88440335 88440646 -57148642 + AluSx SINE Alu 2 312 0 5083 197 72 36 chr10 88440656 88441968 -57147320 - HUERS-P1 LTR ERV1 -4648 1615 4 1125 204 43 5 chr10 88441968 88442176 -57147112 - HUERS-P1 LTR ERV1 -6047 216 1 524 240 0 0 chr10 88442176 88442276 -57147012 - LTR8A LTR ERV1 0 727 628 3118 119 39 86 chr10 88442628 88443268 -57146020 + MER4B LTR ERV1 1 610 0 288 264 11 11 chr10 88443299 88443386 -57145902 - MIR SINE MIR 0 262 176 233 354 0 0 chr10 88443401 88443480 -57145808 - L2 LINE L2 -6 3307 3229 1709 137 68 22 chr10 88443527 88443848 -57145440 - MER61A LTR ERV1 0 343 8 16376 94 41 18 chr10 88443873 88444305 -57144983 - MER61A-int LTR ERV1 0 5217 4796 2387 92 0 0 chr10 88444305 88444611 -57144677 + AluSg SINE Alu 1 306 -4 16376 94 41 18 chr10 88444611 88446559 -57142729 - MER61A-int LTR ERV1 -421 4796 2783 1556 148 72 20 chr10 88446559 88446864 -57142424 - MER61A LTR ERV1 -22 321 1 272 336 33 8 chr10 88446888 88447010 -57142278 - MIR SINE MIR -91 171 47 503 193 304 0 chr10 88447626 88447761 -57141527 + MER5A DNA MER1_type 14 189 0 305 350 16 8 chr10 88447774 88447897 -57141391 + MIR3 SINE MIR 78 201 -7 195 432 8 0 chr10 88447995 88448127 -57141161 - MIR SINE MIR -125 137 5 1992 143 35 24 chr10 88448319 88448690 -57140598 + THE1C LTR MaLR 1 375 0 24 0 0 0 chr10 88448792 88448816 -57140472 + AT_rich Low_complexity Low_complexity 1 24 0 24 53 0 0 chr10 88449116 88449154 -57140134 + AT_rich Low_complexity Low_complexity 1 38 0 270 286 26 13 chr10 88449496 88449573 -57139715 - L2 LINE L2 -14 3299 3222 21 36 0 0 chr10 88449605 88449633 -57139655 + AT_rich Low_complexity Low_complexity 1 28 0 481 317 80 41 chr10 88449683 88450021 -57139267 - L2 LINE L2 -753 2561 2211 206 167 21 0 chr10 88450766 88450814 -57138474 + A-rich Low_complexity Low_complexity 5 53 0 317 371 68 0 chr10 88451586 88451823 -57137465 + L1MC/D LINE L1 5381 5633 -2175 200 310 0 35 chr10 88452553 88452666 -57136622 + GA-rich Low_complexity Low_complexity 4 112 0 371 336 76 15 chr10 88452881 88453211 -57136077 + L1MC4a LINE L1 5338 5687 -2121 603 208 6 64 chr10 88453212 88453340 -57135948 + MIR SINE MIR 74 191 -71 1965 143 0 19 chr10 88453340 88453647 -57135641 + AluSx SINE Alu 1 301 -11 603 208 6 64 chr10 88453647 88453691 -57135597 + MIR SINE MIR 191 236 -26 265 284 180 21 chr10 88453765 88453959 -57135329 + L1MC4a LINE L1 5709 5933 -1875 25 31 0 0 chr10 88454036 88454068 -57135220 + AT_rich Low_complexity Low_complexity 1 32 0 876 156 0 0 chr10 88454073 88454201 -57135087 - AluJb SINE Alu -184 128 1 2167 153 25 35 chr10 88454359 88454759 -57134529 - MSTD LTR MaLR 0 396 1 1201 212 68 96 chr10 88454809 88454939 -57134349 - MER39 LTR ERV1 -45 662 530 1954 159 0 3 chr10 88454939 88455240 -57134048 + AluJb SINE Alu 10 309 -3 1201 212 68 96 chr10 88455240 88455524 -57133764 - MER39 LTR ERV1 -177 530 260 288 184 71 51 chr10 88455498 88455596 -57133692 - LTR48B LTR ERV1 -544 100 1 * 22 106 0 0 chr10 88455703 88455788 -57133500 + AT_rich Low_complexity Low_complexity 1 85 0 29 28 0 0 chr10 88455856 88455892 -57133396 + AT_rich Low_complexity Low_complexity 1 36 0 630 256 51 34 chr10 88456865 88457099 -57132189 + L1MC/D LINE L1 5515 5752 -2056 274 281 31 0 chr10 88457456 88457552 -57131736 + L1ME3A LINE L1 69 167 -5952 4132 122 8 12 chr10 88457791 88458336 -57130952 + MER41B LTR ERV1 1 544 -91 3996 82 24 0 chr10 88458336 88458875 -57130413 - MER41A LTR ERV1 0 554 3 4132 122 8 12 chr10 88458875 88458967 -57130321 + MER41B LTR ERV1 544 635 0 426 309 62 44 chr10 88459605 88460124 -57129164 + L1ME3A LINE L1 944 1486 -4824 201 39 0 0 chr10 88460124 88460150 -57129138 + (CA)n Simple_repeat Simple_repeat 1 26 0 426 309 62 44 chr10 88460150 88460303 -57128985 + L1ME3A LINE L1 1486 1635 -4675 1015 280 78 37 chr10 88460391 88461119 -57128169 + L1ME3A LINE L1 1792 2513 -3616 23 0 0 0 chr10 88461121 88461144 -57128144 + AT_rich Low_complexity Low_complexity 1 23 0 6741 205 43 26 chr10 88461376 88462502 -57126786 - ERVL LTR ERVL -983 4781 3623 196 51 26 26 chr10 88462502 88462541 -57126747 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 6741 205 43 26 chr10 88462541 88462871 -57126417 - ERVL LTR ERVL -2141 3623 3300 1532 195 92 26 chr10 88462871 88463220 -57126068 - MLT1D LTR MaLR -133 372 1 1409 256 139 31 chr10 88463220 88464155 -57125133 + L1ME3A LINE L1 4071 4904 -1225 2153 117 3 3 chr10 88464155 88464454 -57124834 + AluSx SINE Alu 1 299 -13 15266 130 30 51 chr10 88464462 88466374 -57122914 - Tigger2 DNA MER2_type 0 2718 882 2062 99 35 3 chr10 88466374 88466657 -57122631 + AluSx SINE Alu 1 292 -20 15266 130 30 51 chr10 88466657 88467520 -57121768 - Tigger2 DNA MER2_type -1836 882 2 1409 256 139 31 chr10 88467520 88467600 -57121688 + L1ME3A LINE L1 4910 5211 -918 964 281 65 11 chr10 88467596 88468049 -57121239 + L1M1 LINE L1 5258 5725 -471 * 1144 224 75 59 chr10 88468301 88468757 -57120531 - MLT1C LTR MaLR 0 467 5 2781 13 0 10 chr10 88469110 88469424 -57119864 - AluYa5 SINE Alu 0 311 1 930 252 20 8 chr10 88470095 88470341 -57118947 + L1ME3A LINE L1 5669 5917 -236 1226 216 49 4 chr10 88470367 88470612 -57118676 + LTR47B LTR ERVL 188 443 0 7890 215 57 63 chr10 88470612 88473615 -57115673 - L1MB8 LINE L1 -134 6044 2953 681 190 16 0 chr10 88473615 88473736 -57115552 - AluJb SINE Alu -189 123 1 7890 215 57 63 chr10 88473736 88474243 -57115045 - L1MB8 LINE L1 -3225 2953 2445 1443 170 34 34 chr10 88474272 88474566 -57114722 - AluJo SINE Alu -5 307 14 224 179 0 0 chr10 88474618 88474657 -57114631 + MIR SINE MIR 117 155 -107 24 0 0 0 chr10 88477723 88477747 -57111541 + AT_rich Low_complexity Low_complexity 1 24 0 2055 128 0 0 chr10 88478490 88478786 -57110502 - AluSc SINE Alu -13 296 1 859 249 0 34 chr10 88479960 88480169 -57109119 - MER58A DNA MER1_type -1 223 22 234 238 12 36 chr10 88480332 88480416 -57108872 + (TATATG)n Simple_repeat Simple_repeat 3 84 0 212 264 0 0 chr10 88480421 88480474 -57108814 + L2 LINE L2 3258 3310 -3 192 222 99 25 chr10 88480462 88480543 -57108745 + L2 LINE L2 2394 2480 -834 * 14256 176 37 36 chr10 88481580 88481930 -57107358 - L1PB4 LINE L1 0 6872 6524 1171 9 42 5 chr10 88481930 88482143 -57107145 + (TCTA)n Simple_repeat Simple_repeat 1 221 0 14256 176 37 36 chr10 88482143 88485522 -57103766 - L1PB4 LINE L1 -348 6524 2998 2322 113 3 0 chr10 88485522 88485832 -57103456 - AluSx SINE Alu -1 311 1 14256 176 37 36 chr10 88485832 88488168 -57101120 - L1PB4 LINE L1 -3874 2998 666 1185 148 0 15 chr10 88488171 88488373 -57100915 - L1PB4 LINE L1 -6663 200 2 532 271 28 22 chr10 88488875 88489056 -57100232 - MER5A DNA MER1_type -1 188 7 182 292 21 0 chr10 88491175 88491223 -57098065 - L2 LINE L2 -16 3256 3208 189 0 0 0 chr10 88491554 88491575 -57097713 + (TA)n Simple_repeat Simple_repeat 1 21 0 2818 10 0 0 chr10 88491575 88491881 -57097407 - AluY SINE Alu -5 306 1 247 283 54 36 chr10 88491898 88492064 -57097224 + L1ME1 LINE L1 5804 5975 -195 224 283 71 26 chr10 88492420 88492533 -57096755 + MIR SINE MIR 27 144 -64 336 353 77 14 chr10 88493043 88493264 -57096024 + L2 LINE L2 880 1114 -2200 191 250 62 0 chr10 88493283 88493331 -57095957 - L2 LINE L2 -336 2977 2927 1227 167 62 40 chr10 88493332 88493608 -57095680 + LTR52 LTR ERVL 138 419 -2 244 394 14 7 chr10 88493703 88493845 -57095443 - L2 LINE L2 -609 2705 2563 507 227 7 58 chr10 88493879 88494033 -57095255 - L2 LINE L2 -905 2409 2264 1645 148 17 0 chr10 88494165 88494462 -57094826 - L1MA9 LINE L1 0 6312 6011 348 24 0 0 chr10 88495116 88495157 -57094131 + (TG)n Simple_repeat Simple_repeat 1 41 0 7263 44 1 9 chr10 88495880 88496899 -57092389 + L1PA5 LINE L1 5143 6154 0 324 337 51 0 chr10 88496971 88497069 -57092219 + L2 LINE L2 3161 3263 -9 25 0 0 0 chr10 88497116 88497141 -57092147 + AT_rich Low_complexity Low_complexity 1 25 0 2348 148 35 9 chr10 88497159 88497593 -57091695 - L1PA15 LINE L1 -2 6163 5719 2252 161 39 24 chr10 88497593 88498009 -57091279 + Tigger2a DNA MER2_type 13 434 0 2034 152 0 0 chr10 88498406 88498708 -57090580 - AluSx SINE Alu -7 305 4 387 264 11 0 chr10 88498882 88498973 -57090315 - MER94 DNA DNA -40 94 3 1980 246 84 82 chr10 88499338 88499723 -57089565 + L1ME LINE L1 7 390 -5588 231 36 0 0 chr10 88499723 88499751 -57089537 + (GA)n Simple_repeat Simple_repeat 2 29 0 1980 246 84 82 chr10 88499751 88500505 -57088783 + L1ME LINE L1 390 1025 -4953 506 261 172 0 chr10 88501445 88501579 -57087709 + MER5A DNA MER1_type 33 189 0 180 152 0 0 chr10 88502178 88502211 -57087077 + (CA)n Simple_repeat Simple_repeat 2 34 0 2909 227 79 24 chr10 88503243 88504000 -57085288 - MER21B LTR ERV1 -64 799 1 1003 282 123 44 chr10 88504793 88505297 -57083991 + MLT1H LTR MaLR 1 544 -5 21 0 0 0 chr10 88505789 88505810 -57083478 + AT_rich Low_complexity Low_complexity 1 21 0 197 81 0 27 chr10 88506149 88506186 -57083102 + (TG)n Simple_repeat Simple_repeat 1 36 0 209 105 0 26 chr10 88506198 88506236 -57083052 + (GGGA)n Simple_repeat Simple_repeat 1 37 0 193 340 0 0 chr10 88506939 88506992 -57082296 + L2 LINE L2 2246 2298 -1016 999 291 58 21 chr10 88507077 88507458 -57081830 + L1ME3A LINE L1 5318 5712 -450 1021 168 11 17 chr10 88507466 88507645 -57081643 - Tigger2 DNA MER2_type -10 2708 2531 658 342 50 24 chr10 88507648 88508025 -57081263 + L1ME3A LINE L1 5720 6106 -64 1861 231 157 52 chr10 88508026 88508430 -57080858 - MER97a DNA MER1_type? 0 894 534 1907 155 14 70 chr10 88508430 88508843 -57080445 - MLT1B LTR MaLR 0 390 1 1861 231 157 52 chr10 88508843 88509247 -57080041 - MER97a DNA MER1_type? -360 534 1 233 250 0 0 chr10 88509247 88509307 -57079981 + L1ME3A LINE L1 6099 6158 -12 2245 160 56 17 chr10 88509534 88509946 -57079342 + MSTA LTR MaLR 1 428 0 1091 185 38 0 chr10 88510349 88510560 -57078728 + MER20 DNA MER1_type 1 219 0 186 43 0 0 chr10 88510586 88510609 -57078679 + (A)n Simple_repeat Simple_repeat 1 23 0 33 25 0 0 chr10 88510626 88510666 -57078622 + AT_rich Low_complexity Low_complexity 1 40 0 16832 157 23 7 chr10 88511483 88514292 -57074996 + L1M1 LINE L1 53 2905 -4660 2437 65 0 0 chr10 88514292 88514583 -57074705 + AluY SINE Alu 1 291 -20 318 26 0 0 chr10 88514600 88514639 -57074649 + (CA)n Simple_repeat Simple_repeat 2 40 0 1156 101 19 0 chr10 88514639 88514797 -57074491 + AluSq SINE Alu 130 290 -23 294 278 79 16 chr10 88515624 88515750 -57073538 + MIR SINE MIR 16 149 -59 301 280 131 9 chr10 88516168 88516275 -57073013 + L1ME3A LINE L1 5602 5721 -449 1021 168 11 17 chr10 88516275 88516454 -57072834 - Tigger2 DNA MER2_type -10 2708 2531 658 342 50 24 chr10 88516457 88516834 -57072454 + L1ME3A LINE L1 5720 6106 -64 1861 231 157 52 chr10 88516835 88517239 -57072049 - MER97a DNA MER1_type? 0 894 534 1892 157 14 70 chr10 88517239 88517652 -57071636 - MLT1B LTR MaLR 0 390 1 1861 231 157 52 chr10 88517652 88518056 -57071232 - MER97a DNA MER1_type? -360 534 1 233 250 0 0 chr10 88518056 88518116 -57071172 + L1ME3A LINE L1 6099 6158 -12 2245 160 56 17 chr10 88518343 88518755 -57070533 + MSTA LTR MaLR 1 428 0 1091 185 38 0 chr10 88519158 88519369 -57069919 + MER20 DNA MER1_type 1 219 0 186 43 0 0 chr10 88519395 88519418 -57069870 + (A)n Simple_repeat Simple_repeat 1 23 0 33 25 0 0 chr10 88519435 88519475 -57069813 + AT_rich Low_complexity Low_complexity 1 40 0 17828 152 22 12 chr10 88520292 88523101 -57066187 + L1M1 LINE L1 53 2898 -4667 2334 67 0 3 chr10 88523101 88523424 -57065864 + AluY SINE Alu 1 322 0 17828 152 22 12 chr10 88523424 88523611 -57065677 + L1M1 LINE L1 2898 3082 -4483 2477 87 0 3 chr10 88523619 88523953 -57065335 + L1MA2 LINE L1 5446 5778 -526 7018 56 6 0 chr10 88523953 88525326 -57063962 + L1PA6 LINE L1 4777 6151 -3 2936 119 21 69 chr10 88525326 88525881 -57063407 + L1MA2 LINE L1 5769 6304 0 1700 187 54 9 chr10 88525912 88526244 -57063044 + MER7A DNA MER2_type 2 346 0 1640 175 38 35 chr10 88526294 88526660 -57062628 - Tigger7 DNA MER2_type 0 2487 2121 543 260 18 26 chr10 88526656 88526881 -57062407 - Tigger7 DNA MER2_type -434 299 1 * 25 0 0 0 chr10 88526898 88526923 -57062365 + AT_rich Low_complexity Low_complexity 1 25 0 5468 172 20 63 chr10 88527082 88527604 -57061684 + L1PA16 LINE L1 1 526 -6323 499 77 0 0 chr10 88527604 88527669 -57061619 - THE1B LTR MaLR -204 160 96 5468 172 20 63 chr10 88527669 88528115 -57061173 + L1PA16 LINE L1 526 989 -5860 2652 155 22 20 chr10 88528103 88528488 -57060800 + L1PA16 LINE L1 1492 1875 -4974 * 2279 132 22 25 chr10 88528488 88528853 -57060435 - THE1B LTR MaLR 0 364 1 11283 94 15 13 chr10 88528853 88530430 -57058858 - THE1B-int LTR MaLR -1 1579 1 1891 124 72 66 chr10 88530430 88530792 -57058496 - THE1B LTR MaLR 0 364 1 2652 155 22 20 chr10 88530792 88530906 -57058382 + L1PA16 LINE L1 1874 1994 -4855 * 12364 201 21 21 chr10 88530884 88532261 -57057027 + L1PA16 LINE L1 2827 4202 -2667 1899 176 0 0 chr10 88532261 88532563 -57056725 + AluJb SINE Alu 1 302 -10 12364 201 21 21 chr10 88532563 88535159 -57054129 + L1PA16 LINE L1 4202 6800 -69 294 291 19 10 chr10 88535582 88535685 -57053603 - MIR SINE MIR -122 140 37 4061 176 57 18 chr10 88536558 88537448 -57051840 + L1MC3 LINE L1 6861 7785 0 1243 255 52 0 chr10 88537444 88537912 -57051376 + L1ME1 LINE L1 2501 2998 -3542 * 402 295 110 62 chr10 88538020 88538673 -57050615 - L1M2 LINE L1 -5461 1388 832 5211 258 58 24 chr10 88538677 88540689 -57048599 + L1ME1 LINE L1 2900 4979 -1561 303 28 0 0 chr10 88541018 88541054 -57048234 + (CAT)n Simple_repeat Simple_repeat 1 36 0 30 69 0 0 chr10 88541316 88541374 -57047914 + AT_rich Low_complexity Low_complexity 1 58 0 1187 215 36 20 chr10 88543431 88543733 -57045555 - HsTC2 DNA Tc2 -1 1897 1591 322 327 20 13 chr10 88543813 88543963 -57045325 - HsTC2 DNA Tc2 -1747 151 1 252 215 0 15 chr10 88544259 88544324 -57044964 - Charlie7 DNA MER1_type -2512 100 37 21 0 0 0 chr10 88545230 88545251 -57044037 + AT_rich Low_complexity Low_complexity 1 21 0 2259 133 5 16 chr10 88545264 88545639 -57043649 - L1PA13 LINE L1 -4 6159 5789 10432 173 19 20 chr10 88545639 88547681 -57041607 - L1PA13 LINE L1 -807 5339 3300 459 298 119 40 chr10 88548059 88548412 -57040876 + L1MEd LINE L1 12 392 -5727 320 102 11 159 chr10 88549005 88549093 -57040195 + MADE1 DNA Mariner 2 76 -4 284 224 0 94 chr10 88549420 88549505 -57039783 + HAL1 LINE L1 1570 1646 -861 328 328 79 45 chr10 88549932 88550222 -57039066 - L1M4 LINE L1 -905 5241 4942 641 296 84 11 chr10 88551119 88551393 -57037895 - L1MEc LINE L1 -6029 367 74 2392 199 70 64 chr10 88551457 88551636 -57037652 + L1ME1 LINE L1 5016 5192 -1380 2036 129 0 3 chr10 88551636 88551951 -57037337 - AluSq SINE Alu 0 314 1 2392 199 70 64 chr10 88551951 88553013 -57036275 + L1ME1 LINE L1 5192 6266 -306 6220 82 17 2 chr10 88553013 88553903 -57035385 + L1PB1 LINE L1 4885 5796 -355 297 0 0 0 chr10 88553903 88553936 -57035352 + (TG)n Simple_repeat Simple_repeat 2 34 0 6220 82 17 2 chr10 88553936 88554297 -57034991 + L1PB1 LINE L1 5796 6150 -1 675 242 83 62 chr10 88554371 88554660 -57034628 + L1ME1 LINE L1 6256 6550 -10 852 158 0 0 chr10 88556966 88557099 -57032189 + AluSq/x SINE Alu 1 133 -179 375 229 57 129 chr10 88557223 88557503 -57031785 - L1M4 LINE L1 -2157 3989 3730 319 288 18 9 chr10 88559148 88559259 -57030029 - L1MC4 LINE L1 -27 8015 7904 797 220 14 79 chr10 88559394 88559518 -57029770 - L1ME2 LINE L1 -1 6163 6032 1452 203 138 10 chr10 88559518 88559932 -57029356 - MLT1C LTR MaLR 0 467 1 797 220 14 79 chr10 88559932 88560098 -57029190 - L1ME2 LINE L1 -132 6032 5892 311 229 107 30 chr10 88560141 88560272 -57029016 - LTR67 LTR ERVL -4 553 413 758 340 72 31 chr10 88560467 88560979 -57028309 - LTR67 LTR ERVL -1 556 24 54 16 0 0 chr10 88561513 88561574 -57027714 + AT_rich Low_complexity Low_complexity 1 61 0 1896 195 29 0 chr10 88562323 88562708 -57026580 - MER63 DNA MER1_type 0 1060 665 4788 161 20 41 chr10 88562780 88563957 -57025331 - L1MB3 LINE L1 0 6183 5030 423 320 85 28 chr10 88564073 88564126 -57025162 - HERVL LTR ERVL -1352 4302 4253 1505 244 75 29 chr10 88564126 88564609 -57024679 + MLT1D LTR MaLR 1 505 0 423 320 85 28 chr10 88564609 88564802 -57024486 - HERVL LTR ERVL -1401 4253 4042 823 188 37 87 chr10 88565125 88565343 -57023945 + MER58C DNA MER1_type 9 215 0 850 250 123 54 chr10 88565509 88565631 -57023657 + MLT1F1 LTR MaLR 2 114 -453 240 86 0 0 chr10 88565631 88565666 -57023622 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 850 250 123 54 chr10 88565666 88565864 -57023424 + MLT1F1 LTR MaLR 114 297 -270 1891 57 8 23 chr10 88565864 88566128 -57023160 + L1PA4 LINE L1 5896 6155 0 850 250 123 54 chr10 88566128 88566321 -57022967 + MLT1F1 LTR MaLR 297 565 -2 646 372 53 16 chr10 88566366 88566800 -57022488 - HERVL LTR ERVL -2711 3053 2589 195 42 0 0 chr10 88566800 88566824 -57022464 + (TTTG)n Simple_repeat Simple_repeat 3 26 0 646 372 53 16 chr10 88566824 88566994 -57022294 - HERVL LTR ERVL -3175 2589 2427 219 154 0 0 chr10 88567009 88567048 -57022240 + (TA)n Simple_repeat Simple_repeat 2 40 0 329 268 29 86 chr10 88567154 88567187 -57022101 + L1ME4a LINE L1 5622 5655 -466 1740 194 0 7 chr10 88567187 88567491 -57021797 + AluJb SINE Alu 2 303 -9 329 268 29 86 chr10 88567491 88567700 -57021588 + L1ME4a LINE L1 5655 5850 -271 634 124 0 0 chr10 88567701 88567798 -57021490 + AluSg/x SINE Alu 216 312 0 208 246 16 0 chr10 88568722 88568783 -57020505 + (TTCA)n Simple_repeat Simple_repeat 3 64 0 472 301 70 32 chr10 88568857 88569043 -57020245 + MIR3 SINE MIR 5 197 -11 535 322 11 11 chr10 88569506 88569689 -57019599 - MER5A DNA MER1_type 0 189 7 303 255 96 0 chr10 88570518 88570612 -57018676 - L2 LINE L2 -29 3243 3141 389 161 0 0 chr10 88570734 88570796 -57018492 - AluJo/FRAM SINE Alu -36 266 205 287 241 0 0 chr10 88570780 88570834 -57018454 - AluSc SINE Alu -113 186 133 * 315 260 0 0 chr10 88571022 88571099 -57018189 - L2 LINE L2 -712 2602 2526 681 274 43 25 chr10 88571262 88571614 -57017674 + MLT1I LTR MaLR 21 409 0 283 247 81 90 chr10 88571826 88572049 -57017239 + LTR67 LTR ERVL 327 547 -10 263 261 159 11 chr10 88572057 88572145 -57017143 - L2 LINE L2 -981 2333 2233 3408 198 29 7 chr10 88573464 88574157 -57015131 - L1MB3 LINE L1 -2 6417 5704 480 48 0 0 chr10 88574157 88574220 -57015068 + (TTCC)n Simple_repeat Simple_repeat 1 63 0 3408 198 29 7 chr10 88574220 88574274 -57015014 - L1MB3 LINE L1 -715 5704 5653 8489 259 47 10 chr10 88574374 88577249 -57012039 - L1MB3 LINE L1 -806 5576 2597 15780 237 34 35 chr10 88577253 88582421 -57006867 - L1PA15 LINE L1 -8 7595 2457 1797 82 16 43 chr10 88582421 88582713 -57006575 - AluSq SINE Alu 0 321 37 15780 237 34 35 chr10 88582713 88585164 -57004124 - L1PA15 LINE L1 -5146 2457 6 1332 181 34 2 chr10 88585177 88585575 -57003713 - L1MB3 LINE L1 -3775 2607 2199 2355 176 26 100 chr10 88585576 88586256 -57003032 - L1MA9 LINE L1 -37 6275 5646 1307 198 18 12 chr10 88586253 88586714 -57002574 - L1MB3 LINE L1 -4174 2210 1654 * 4552 149 51 54 chr10 88586725 88586887 -57002401 - L1MC1 LINE L1 -1 6332 6171 2055 127 0 0 chr10 88586887 88587170 -57002118 + AluSx SINE Alu 1 283 -29 4552 149 51 54 chr10 88587170 88587953 -57001335 - L1MC1 LINE L1 -162 6171 5390 2565 98 3 3 chr10 88587974 88588342 -57000946 - L1PB1 LINE L1 -2 6865 6498 34 0 0 0 chr10 88588353 88588387 -57000901 + AT_rich Low_complexity Low_complexity 1 34 0 14687 179 58 5 chr10 88588389 88588421 -57000867 - L1PB1 LINE L1 -360 6507 6478 225 0 0 0 chr10 88588421 88588446 -57000842 + (ATTG)n Simple_repeat Simple_repeat 3 27 0 14687 179 58 5 chr10 88588446 88594583 -56994705 - L1PB1 LINE L1 -389 6478 6 4050 147 36 5 chr10 88594602 88595355 -56993933 - L1MA5 LINE L1 -2 6298 5523 1200 244 58 8 chr10 88595356 88595737 -56993551 - L1MC1 LINE L1 -751 5395 4996 303 111 63 32 chr10 88595814 88595877 -56993411 - L1MC1 LINE L1 -1601 4545 4481 244 200 0 0 chr10 88595875 88595920 -56993368 - L1M4c LINE L1 -4706 1678 1634 * 1505 172 68 52 chr10 88595899 88596207 -56993081 - L1M4c LINE L1 -6043 341 29 499 305 41 22 chr10 88596338 88596705 -56992583 - L1MC1 LINE L1 -1944 4202 3829 5443 152 80 5 chr10 88596877 88598020 -56991268 - L1PA16 LINE L1 0 6166 4890 330 87 0 0 chr10 88598883 88598929 -56990359 + (TTTC)n Simple_repeat Simple_repeat 3 48 0 27 0 0 0 chr10 88599472 88599499 -56989789 + AT_rich Low_complexity Low_complexity 1 27 0 243 335 16 44 chr10 88599627 88599768 -56989520 + MIR SINE MIR 20 154 -91 2183 93 3 13 chr10 88600059 88600360 -56988928 + AluY SINE Alu 1 298 -13 2013 102 0 8 chr10 88600613 88600878 -56988410 + AluSg SINE Alu 35 297 -13 722 221 81 118 chr10 88601740 88602224 -56987064 + LTR37B LTR ERV1 1 466 -2 364 321 52 32 chr10 88603867 88604061 -56985227 + MIR SINE MIR 3 198 -64 1191 188 96 12 chr10 88605246 88605682 -56983606 - LTR54 LTR ERV1 -3 400 1 180 308 94 51 chr10 88605839 88605956 -56983332 + L2 LINE L2 3151 3272 0 393 141 0 0 chr10 88606509 88606580 -56982708 + (CA)n Simple_repeat Simple_repeat 2 72 0 26 50 0 0 chr10 88606817 88606857 -56982431 + AT_rich Low_complexity Low_complexity 1 40 0 444 303 35 14 chr10 88606895 88607037 -56982251 - MIR SINE MIR -99 163 19 1508 240 60 22 chr10 88607448 88607626 -56981662 + MLT1C LTR MaLR 1 171 -296 1656 143 7 14 chr10 88607626 88607913 -56981375 + L1PA16 LINE L1 5873 6157 -9 1508 240 60 22 chr10 88607913 88608184 -56981104 + MLT1C LTR MaLR 171 467 0 646 201 13 0 chr10 88608331 88608480 -56980808 + L1MA10 LINE L1 6180 6330 -4 2152 83 0 21 chr10 88608906 88609194 -56980094 + AluSg SINE Alu 17 298 -12 288 309 123 43 chr10 88609342 88609504 -56979784 - MER5B DNA MER1_type 0 178 4 253 297 8 0 chr10 88611455 88611573 -56977715 - L1ME LINE L1 -297 5824 5706 2229 115 3 3 chr10 88611697 88612002 -56977286 + AluSx SINE Alu 6 310 -2 454 343 78 25 chr10 88612153 88612303 -56976985 - L2 LINE L2 -3 3310 3169 2634 97 24 16 chr10 88612303 88612675 -56976613 - THE1C LTR MaLR 0 375 1 454 343 78 25 chr10 88612675 88612807 -56976481 - L2 LINE L2 -144 3169 3013 182 388 20 20 chr10 88612848 88613000 -56976288 - L2 LINE L2 -414 2900 2749 21 36 0 0 chr10 88613202 88613230 -56976058 + AT_rich Low_complexity Low_complexity 1 28 0 758 284 14 3 chr10 88613251 88613536 -56975752 - L1M4 LINE L1 -3573 2573 2286 2491 65 0 7 chr10 88613662 88613972 -56975316 - AluY SINE Alu -3 308 1 25 31 0 0 chr10 88614313 88614345 -56974943 + AT_rich Low_complexity Low_complexity 1 32 0 2178 92 0 16 chr10 88614600 88614903 -56974385 - AluY SINE Alu -13 298 1 262 328 55 31 chr10 88615017 88615145 -56974143 - MIR SINE MIR -61 201 71 2178 116 0 0 chr10 88615181 88615473 -56973815 - AluSx SINE Alu -14 298 7 210 176 12 82 chr10 88615479 88615564 -56973724 + T-rich Low_complexity Low_complexity 2 80 0 537 207 180 0 chr10 88615580 88615730 -56973558 - L1MB2 LINE L1 -8 6163 5987 1931 159 0 0 chr10 88615984 88616273 -56973015 - AluJb SINE Alu -23 289 1 278 259 43 17 chr10 88616877 88616993 -56972295 - Charlie7 DNA MER1_type -1 2611 2493 356 277 0 0 chr10 88617143 88617226 -56972062 + L2 LINE L2 3184 3266 -6 1386 127 72 104 chr10 88618399 88618745 -56970543 - MER1B DNA MER1_type 0 337 3 342 162 222 0 chr10 88618885 88618984 -56970304 - MER1B DNA MER1_type -174 123 3 1090 296 96 34 chr10 88619059 88619843 -56969445 - L1MC4 LINE L1 -18 8024 7193 292 331 86 53 chr10 88619873 88620232 -56969056 - L2 LINE L2 0 3313 2943 273 312 19 70 chr10 88620206 88620363 -56968925 - L2 LINE L2 -570 2744 2596 * 202 209 0 0 chr10 88620593 88620636 -56968652 + (TG)n Simple_repeat Simple_repeat 1 43 0 2046 135 0 0 chr10 88621678 88621975 -56967313 - AluSx SINE Alu -15 297 1 180 111 0 0 chr10 88622707 88622734 -56966554 + (TA)n Simple_repeat Simple_repeat 1 27 0 * 198 0 0 0 chr10 88622733 88622755 -56966533 + (GA)n Simple_repeat Simple_repeat 2 23 0 326 306 38 45 chr10 88623374 88623531 -56965757 - MIR SINE MIR -3 259 104 237 250 0 0 chr10 88624104 88624152 -56965136 - MER91 DNA MER1_type -10 186 139 301 232 127 66 chr10 88624325 88624506 -56964782 - L2 LINE L2 -11 3302 3111 237 193 114 0 chr10 88624533 88624621 -56964667 - Charlie7 DNA MER1_type -81 2531 2434 626 191 129 11 chr10 88624690 88624761 -56964527 + MER3 DNA MER1_type 11 72 -137 1028 32 0 0 chr10 88624761 88624886 -56964402 + L1PA13 LINE L1 6026 6150 -13 626 191 129 11 chr10 88624886 88624992 -56964296 + MER3 DNA MER1_type 72 209 0 374 278 53 41 chr10 88626205 88626374 -56962914 + L1M4 LINE L1 3090 3260 -2886 25 31 0 0 chr10 88627082 88627114 -56962174 + AT_rich Low_complexity Low_complexity 1 32 0 1270 274 95 22 chr10 88627252 88627391 -56961897 - MLT1G LTR MaLR -19 571 444 1318 215 63 23 chr10 88627391 88627740 -56961548 - MLT1A1 LTR MaLR -2 363 1 1270 274 95 22 chr10 88627740 88628053 -56961235 - MLT1G LTR MaLR -146 444 86 416 297 49 58 chr10 88628261 88628665 -56960623 + L1 LINE L1 2596 3003 -3143 203 0 37 0 chr10 88628745 88628772 -56960516 + (TCTA)n Simple_repeat Simple_repeat 2 29 0 454 282 143 34 chr10 88629161 88629427 -56959861 + MLT1L LTR MaLR 156 450 -165 259 335 135 12 chr10 88630362 88630532 -56958756 + MLT1I LTR MaLR 198 388 -21 511 294 58 58 chr10 88630687 88631190 -56958098 + L1MEd LINE L1 706 1208 -4911 212 200 18 0 chr10 88631260 88631315 -56957973 + GA-rich Low_complexity Low_complexity 1 56 0 261 331 57 88 chr10 88631423 88631538 -56957750 - L2 LINE L2 0 3313 3196 2325 97 0 0 chr10 88631538 88631837 -56957451 - AluSx SINE Alu -13 299 1 261 331 57 88 chr10 88631837 88631974 -56957314 - L2 LINE L2 -117 3196 3073 1091 165 45 0 chr10 88631974 88632115 -56957173 - L1MA9 LINE L1 -1 6311 6155 186 71 0 0 chr10 88632115 88632143 -56957145 + (TG)n Simple_repeat Simple_repeat 1 28 0 1091 165 45 0 chr10 88632143 88632225 -56957063 - L1MA9 LINE L1 -157 6155 6078 261 331 57 88 chr10 88632225 88632324 -56956964 - L2 LINE L2 -240 3073 2972 25 31 0 0 chr10 88632596 88632628 -56956660 + AT_rich Low_complexity Low_complexity 1 32 0 610 348 107 31 chr10 88632755 88633109 -56956179 - MLT1K LTR MaLR -105 483 103 402 87 159 0 chr10 88633147 88633216 -56956072 + MADE1 DNA Mariner 1 80 0 208 114 0 45 chr10 88634895 88634939 -56954349 + (CAAA)n Simple_repeat Simple_repeat 2 43 0 1391 251 79 40 chr10 88635449 88635919 -56953369 - LTR16C LTR ERVL -3 488 1 251 170 40 0 chr10 88635978 88636052 -56953236 + L1ME LINE L1 5707 5785 -379 29 47 0 0 chr10 88636354 88636397 -56952891 + AT_rich Low_complexity Low_complexity 1 43 0 2289 84 0 3 chr10 88638545 88638843 -56950445 - AluY SINE Alu -14 297 1 2745 104 12 5 chr10 88638848 88639252 -56950036 - L1PA11 LINE L1 -7 6167 5761 553 175 10 0 chr10 88639291 88639388 -56949900 - AluJb SINE Alu -106 206 109 790 93 0 0 chr10 88639389 88639496 -56949792 - L1PA11 LINE L1 -421 5747 5641 * 5906 158 38 22 chr10 88639495 88640650 -56948638 + L1P LINE L1 2126 3298 -2848 3973 139 45 63 chr10 88640651 88641450 -56947838 + LTR1 LTR ERV1 1 785 0 6207 127 22 0 chr10 88641450 88642433 -56946855 + L1P LINE L1 3296 4300 -1846 252 0 0 0 chr10 88642434 88642462 -56946826 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 1555 170 37 0 chr10 88642464 88642734 -56946554 - AluJb SINE Alu -32 280 1 319 169 13 13 chr10 88643025 88643102 -56946186 + CT-rich Low_complexity Low_complexity 3 79 0 310 297 44 0 chr10 88643324 88643415 -56945873 - L1 LINE L1 -2382 3764 3670 29 0 0 0 chr10 88643830 88643859 -56945429 + AT_rich Low_complexity Low_complexity 1 29 0 213 206 22 43 chr10 88643925 88644017 -56945271 + A-rich Low_complexity Low_complexity 2 91 0 543 126 37 60 chr10 88644648 88644793 -56944495 + MIR SINE MIR 61 198 -61 23 33 0 0 chr10 88646247 88646277 -56943011 + AT_rich Low_complexity Low_complexity 1 30 0 258 279 29 29 chr10 88647028 88647132 -56942156 + L1ME LINE L1 5370 5473 -648 1824 159 37 76 chr10 88647195 88647630 -56941658 + MSTB LTR MaLR 9 426 0 847 185 85 0 chr10 88647791 88647980 -56941308 + MER3 DNA MER1_type 5 209 0 228 318 0 0 chr10 88647989 88648052 -56941236 + L2 LINE L2 102 164 -3150 327 318 137 56 chr10 88648053 88648484 -56940804 + L2 LINE L2 1477 1942 -1372 507 319 90 85 chr10 88649201 88649969 -56939319 + L1M4 LINE L1 3567 4338 -1808 258 263 44 26 chr10 88650156 88650270 -56939018 + L1M4 LINE L1 4612 4727 -1419 23 78 0 0 chr10 88651931 88651982 -56937306 + AT_rich Low_complexity Low_complexity 1 51 0 2403 269 54 35 chr10 88652200 88653866 -56935422 + L1MCa LINE L1 1597 3435 -2991 552 217 125 0 chr10 88653876 88653996 -56935292 - MER58B DNA MER1_type 0 341 207 1749 272 42 57 chr10 88654001 88654230 -56935058 + L1MCa LINE L1 3471 3702 -2724 2332 92 0 0 chr10 88654230 88654533 -56934755 + AluSx SINE Alu 1 303 -9 1749 272 42 57 chr10 88654533 88655164 -56934124 + L1MCa LINE L1 3702 4318 -2108 457 369 53 0 chr10 88655378 88655565 -56933723 - MIR SINE MIR -32 230 34 463 246 165 40 chr10 88656451 88656699 -56932589 - L1M4 LINE L1 -1304 4842 4564 1119 308 106 20 chr10 88657158 88658540 -56930748 + L1ME3A LINE L1 2453 3953 -2193 800 303 101 21 chr10 88658651 88659265 -56930023 + L1ME3A LINE L1 5274 5936 -234 1012 31 79 0 chr10 88659634 88659761 -56929527 - MER85 DNA T2_type -2 137 1 21 0 0 0 chr10 88659944 88659965 -56929323 + AT_rich Low_complexity Low_complexity 1 21 0 660 289 106 33 chr10 88660609 88660882 -56928406 + L2 LINE L2 3020 3312 -1 2319 85 10 3 chr10 88661140 88661446 -56927842 - AluSq SINE Alu -5 308 1 409 183 31 22 chr10 88664019 88664127 -56925161 - L1M4 LINE L1 -1143 5003 4896 2078 118 3 19 chr10 88664404 88664717 -56924571 - AluSx SINE Alu 0 312 5 705 179 63 53 chr10 88665521 88665728 -56923560 - MER3 DNA MER1_type 0 209 1 1943 98 22 0 chr10 88665786 88665949 -56923339 - AluSx SINE Alu -13 299 126 195 42 0 0 chr10 88665949 88665973 -56923315 + (TTA)n Simple_repeat Simple_repeat 2 25 0 1943 98 22 0 chr10 88665973 88666086 -56923202 - AluSx SINE Alu -186 126 17 1591 215 45 8 chr10 88666465 88666846 -56922442 + MSTD LTR MaLR 1 395 -1 617 239 8 0 chr10 88667115 88667259 -56922029 - FLAM_A SINE Alu 0 145 1 437 78 0 0 chr10 88667524 88667588 -56921700 - L1MA3 LINE L1 -7 6298 6235 4056 251 60 12 chr10 88667846 88668736 -56920552 - L1MB7 LINE L1 -16 6168 5322 669 11 33 0 chr10 88668736 88668826 -56920462 + (TCTA)n Simple_repeat Simple_repeat 1 93 0 4056 251 60 12 chr10 88668826 88670676 -56918612 - L1MB7 LINE L1 -862 5322 3089 347 219 87 104 chr10 88670982 88671270 -56918018 - L1MC/D LINE L1 -771 5562 5296 489 311 88 62 chr10 88671472 88672003 -56917285 - L1MC/D LINE L1 -1112 5034 4490 528 293 113 14 chr10 88673560 88673782 -56915506 - MIR SINE MIR -10 252 9 207 149 21 21 chr10 88673990 88674037 -56915251 + CT-rich Low_complexity Low_complexity 3 49 0 576 220 34 85 chr10 88674112 88674222 -56915066 - L1MC5 LINE L1 -79 7882 7768 2161 99 27 0 chr10 88674222 88674516 -56914772 - AluSq SINE Alu -11 302 1 576 220 34 85 chr10 88674516 88674700 -56914588 - L1MC5 LINE L1 -193 7768 7603 2182 103 0 3 chr10 88675493 88675785 -56913503 - AluSg SINE Alu -16 294 4 24 0 0 0 chr10 88675799 88675823 -56913465 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr10 88676079 88676100 -56913188 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr10 88676242 88676267 -56913021 + AT_rich Low_complexity Low_complexity 1 25 0 1459 166 47 33 chr10 88676281 88676582 -56912706 - MER2 DNA MER2_type -39 306 2 255 61 0 0 chr10 88676599 88676632 -56912656 + (TG)n Simple_repeat Simple_repeat 2 34 0 2151 151 34 29 chr10 88677491 88678019 -56911269 - LTR10E LTR ERV1 -20 571 1 344 325 32 7 chr10 88678167 88678321 -56910967 + L1MEd LINE L1 916 1073 -5046 702 313 44 22 chr10 88678400 88678905 -56910383 + L1MEd LINE L1 1202 1717 -4593 21 0 0 0 chr10 88679807 88679828 -56909460 + AT_rich Low_complexity Low_complexity 1 21 0 804 249 94 114 chr10 88679842 88680387 -56908901 + MLT1H LTR MaLR 12 545 -4 283 247 0 41 chr10 88680406 88680503 -56908785 + L1ME LINE L1 812 904 -5301 333 248 34 81 chr10 88680511 88680851 -56908437 + L1ME LINE L1 1504 1665 -911 21 0 0 0 chr10 88680868 88680889 -56908399 + AT_rich Low_complexity Low_complexity 1 21 0 278 360 20 5 chr10 88681048 88681251 -56908037 + L1MEd LINE L1 3325 3530 -2599 229 256 56 38 chr10 88681294 88681374 -56907914 - MIR SINE MIR -63 145 105 181 292 0 0 chr10 88681813 88681861 -56907427 - L2 LINE L2 -1 3312 3265 1889 110 50 0 chr10 88681936 88682218 -56907070 - AluSg SINE Alu -14 296 1 2078 122 3 0 chr10 88682357 88682661 -56906627 + AluSx SINE Alu 1 305 -7 855 147 34 5 chr10 88683008 88683183 -56906105 + L1MB2 LINE L1 5991 6180 0 22 0 0 0 chr10 88683597 88683619 -56905669 + AT_rich Low_complexity Low_complexity 1 22 0 399 340 62 39 chr10 88684392 88684698 -56904590 - HAL1b LINE L1 -685 663 351 504 156 44 88 chr10 88684746 88684906 -56904382 - L1MA8 LINE L1 -12 6279 6127 613 207 71 45 chr10 88684943 88685141 -56904147 - L1MC5 LINE L1 -52 7909 7707 1627 193 86 5 chr10 88685422 88685831 -56903457 - L1MB8 LINE L1 -42 6136 5695 1416 225 84 22 chr10 88685835 88685994 -56903294 - L1MB8 LINE L1 -2712 3434 3286 378 91 0 0 chr10 88685994 88686049 -56903239 + (TG)n Simple_repeat Simple_repeat 2 56 0 1416 225 84 22 chr10 88686049 88686436 -56902852 - L1MB8 LINE L1 -2860 3286 2854 373 244 12 0 chr10 88686437 88686523 -56902765 - Tigger5 DNA MER2_type 0 2323 2237 320 200 0 0 chr10 88686533 88686588 -56902700 - Tigger5 DNA MER2_type -2268 55 1 817 184 83 47 chr10 88686588 88686866 -56902422 - L1MB8 LINE L1 -3292 2854 2567 180 0 0 0 chr10 88687474 88687494 -56901794 + (TG)n Simple_repeat Simple_repeat 2 21 0 21 36 0 0 chr10 88688138 88688166 -56901122 + AT_rich Low_complexity Low_complexity 1 28 0 394 317 124 6 chr10 88688833 88688994 -56900294 + MIR SINE MIR 10 189 -73 26 88 0 0 chr10 88689025 88689093 -56900195 + AT_rich Low_complexity Low_complexity 1 68 0 297 289 35 0 chr10 88689409 88689551 -56899737 + L1M4 LINE L1 2148 2294 -3852 297 253 60 36 chr10 88689571 88689737 -56899551 + L1M4 LINE L1 2371 2540 -3606 207 383 54 13 chr10 88689748 88689897 -56899391 + L2 LINE L2 3158 3312 -1 25 99 0 0 chr10 88689991 88690072 -56899216 + AT_rich Low_complexity Low_complexity 1 81 0 27 0 0 0 chr10 88690295 88690322 -56898966 + AT_rich Low_complexity Low_complexity 1 27 0 2417 257 95 9 chr10 88690393 88691450 -56897838 + L1ME3A LINE L1 2139 3277 -2869 317 300 27 20 chr10 88691450 88691600 -56897688 + L1ME3A LINE L1 4518 4668 -1478 664 150 9 9 chr10 88691666 88691779 -56897509 + MER4D LTR ERV1 791 903 0 1695 218 32 11 chr10 88691783 88692154 -56897134 + MER4D-int LTR ERV1 6 384 -6374 * 3449 152 11 81 chr10 88692152 88692744 -56896544 + MER4D-int LTR ERV1 686 971 -5787 2157 113 3 0 chr10 88692744 88693044 -56896244 + AluSx SINE Alu 1 301 -11 3449 152 11 81 chr10 88693044 88693471 -56895817 + MER4D-int LTR ERV1 971 1426 -5332 2526 55 0 0 chr10 88693985 88694293 -56894995 + AluY SINE Alu 1 308 -3 3086 122 29 30 chr10 88694412 88694937 -56894351 - L1PA16 LINE L1 0 6166 5643 646 152 9 180 chr10 88695034 88695245 -56894043 + MER4D-int LTR ERV1 3779 3953 -4167 34 73 0 28 chr10 88695261 88695370 -56893918 + AT_rich Low_complexity Low_complexity 1 106 0 1977 183 32 8 chr10 88695528 88695905 -56893383 + MER4D-int LTR ERV1 5932 6317 -441 2057 135 57 16 chr10 88696013 88696384 -56892904 + MER4D-int LTR ERV1 6373 6758 0 4210 141 82 45 chr10 88696384 88696467 -56892821 + MER4D LTR ERV1 1 79 -793 492 72 0 0 chr10 88696467 88696536 -56892752 + (CA)n Simple_repeat Simple_repeat 2 70 0 4210 141 82 45 chr10 88696536 88697254 -56892034 + MER4D LTR ERV1 79 832 -40 2477 53 0 7 chr10 88697259 88697562 -56891726 - AluY SINE Alu -10 301 1 438 277 38 16 chr10 88697652 88697836 -56891452 + L1ME3A LINE L1 4883 5070 -1076 1942 143 32 40 chr10 88697908 88698286 -56891002 + THE1C LTR MaLR 1 375 0 23 0 0 0 chr10 88698371 88698394 -56890894 + AT_rich Low_complexity Low_complexity 1 23 0 1033 268 73 32 chr10 88698495 88699002 -56890286 + L1ME3A LINE L1 5413 5940 -230 2151 104 7 3 chr10 88699271 88699568 -56889720 + AluSx SINE Alu 1 298 -14 333 309 112 8 chr10 88699690 88699939 -56889349 + L1ME3A LINE L1 5612 5886 -284 1821 180 39 0 chr10 88701638 88701972 -56887316 - MER7A DNA MER2_type -1 345 1 305 331 63 78 chr10 88702500 88702899 -56886389 + L1MEd LINE L1 402 794 -5325 2177 117 0 3 chr10 88702929 88703236 -56886052 + AluSx SINE Alu 1 306 -6 21 0 0 0 chr10 88703345 88703366 -56885922 + AT_rich Low_complexity Low_complexity 1 21 0 2037 136 7 0 chr10 88703415 88703710 -56885578 + AluSx SINE Alu 1 297 -15 1942 169 72 36 chr10 88703720 88704257 -56885031 + MLT2A2 LTR ERVL 1 554 0 4688 106 3 6 chr10 88704257 88704926 -56884362 + HERVL-A2 LTR ERVL 1 667 -4987 * 5567 109 10 1 chr10 88704910 88705689 -56883599 + HERVL LTR ERVL 3750 4535 -1119 8337 82 6 21 chr10 88705728 88706870 -56882418 + HERVL LTR ERVL 4530 5654 0 601 212 106 17 chr10 88706870 88706899 -56882389 + Ricksha DNA DNA 336 380 -2866 2134 162 44 35 chr10 88706908 88707456 -56881832 + MLT2A2 LTR ERVL 1 554 0 465 306 26 33 chr10 88707464 88707735 -56881553 + L1MEd LINE L1 985 1253 -4866 1392 255 113 10 chr10 88707898 88708403 -56880885 + L1M4c LINE L1 1297 1853 -4531 1034 242 95 11 chr10 88708468 88708753 -56880535 - MER2 DNA MER2_type 0 345 37 10046 224 84 14 chr10 88708908 88711747 -56877541 + L1M4c LINE L1 2509 5546 -836 489 306 76 21 chr10 88713662 88714187 -56875101 - HAL1b LINE L1 -704 644 67 2271 132 95 16 chr10 88715281 88715886 -56873402 - MER39 LTR ERV1 0 707 1 1925 129 28 3 chr10 88716185 88716471 -56872817 - AluSx SINE Alu -12 300 8 29 60 0 0 chr10 88716481 88716531 -56872757 + AT_rich Low_complexity Low_complexity 1 50 0 315 0 0 0 chr10 88716885 88716920 -56872368 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 1573 179 7 4 chr10 88716926 88717200 -56872088 - AluJo SINE Alu -37 275 1 207 408 48 37 chr10 88717517 88717789 -56871499 - L2 LINE L2 -598 2716 2442 285 177 35 0 chr10 88717920 88717977 -56871311 + MIR SINE MIR 115 173 -89 204 40 0 0 chr10 88719051 88719076 -56870212 + (TAA)n Simple_repeat Simple_repeat 3 27 0 332 324 73 20 chr10 88719358 88719562 -56869726 + L1MEd LINE L1 2299 2513 -3616 21 36 0 0 chr10 88719658 88719686 -56869602 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr10 88720945 88720980 -56868308 + AT_rich Low_complexity Low_complexity 1 35 0 241 260 81 75 chr10 88721070 88721243 -56868045 - HAL1 LINE L1 -37 2470 2297 686 297 16 6 chr10 88721274 88721456 -56867832 + MIR SINE MIR 2 185 -77 233 370 0 0 chr10 88721727 88721800 -56867488 - HAL1 LINE L1 -2422 85 13 2480 50 0 3 chr10 88722162 88722464 -56866824 + AluY SINE Alu 1 301 -10 2003 110 0 14 chr10 88722474 88722764 -56866524 + AluSx SINE Alu 1 286 -26 4332 131 51 4 chr10 88722992 88723677 -56865611 + LTR62 LTR ERVK 1 717 -2 406 321 18 12 chr10 88724962 88725127 -56864161 - MIR SINE MIR -31 231 66 259 374 52 6 chr10 88725305 88725479 -56863809 + MIR SINE MIR 47 228 -34 297 291 57 63 chr10 88726472 88726647 -56862641 + MIR3 SINE MIR 28 201 -7 24 0 0 0 chr10 88726684 88726708 -56862580 + AT_rich Low_complexity Low_complexity 1 24 0 206 265 0 0 chr10 88726868 88726917 -56862371 + A-rich Low_complexity Low_complexity 1 49 0 22 35 0 0 chr10 88727142 88727171 -56862117 + AT_rich Low_complexity Low_complexity 1 29 0 23 33 0 0 chr10 88727336 88727366 -56861922 + AT_rich Low_complexity Low_complexity 1 30 0 25 31 0 0 chr10 88727852 88727884 -56861404 + AT_rich Low_complexity Low_complexity 1 32 0 230 262 37 55 chr10 88727904 88728068 -56861220 - L1ME4a LINE L1 -113 6008 5848 2559 178 32 16 chr10 88728583 88729082 -56860206 + L1MB2 LINE L1 5636 6142 -29 340 270 189 11 chr10 88729102 88729287 -56860001 + L1ME1 LINE L1 5941 6158 -8 536 170 165 82 chr10 88729736 88729918 -56859370 - L1MA10 LINE L1 0 6334 6138 9426 152 27 1 chr10 88729920 88731499 -56857789 + Tigger4(Zombi) DNA MER2_type 292 1911 -820 8117 117 50 122 chr10 88731499 88733154 -56856134 + THE1B-int LTR MaLR 45 1580 0 600 150 0 102 chr10 88733154 88733281 -56856007 + THE1B LTR MaLR 1 114 -250 21206 161 15 8 chr10 88733281 88736923 -56852365 - L1P4 LINE L1 -549 5619 1943 189 0 0 0 chr10 88736923 88736944 -56852344 + (CAGGG)n Simple_repeat Simple_repeat 5 25 0 21206 161 15 8 chr10 88736944 88737485 -56851803 - L1P4 LINE L1 -4225 1943 1408 1779 163 55 22 chr10 88737491 88737854 -56851434 - THE1C LTR MaLR 0 375 1 8046 132 38 2 chr10 88737854 88739080 -56850208 - THE1C-int LTR MaLR 0 1580 312 671 195 0 26 chr10 88739076 88739230 -56850058 - L1 LINE L1 -3029 3181 3032 * 698 261 119 15 chr10 88739230 88739341 -56849947 - L1 LINE L1 -4928 1213 1115 194 0 39 0 chr10 88739341 88739367 -56849921 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 698 261 119 15 chr10 88739367 88739515 -56849773 - L1 LINE L1 -5026 1115 927 2194 97 30 0 chr10 88740430 88740729 -56848559 + AluSp SINE Alu 6 313 0 4090 235 72 13 chr10 88741779 88743381 -56845907 + L1MEc LINE L1 1295 2976 -3239 1700 232 22 3 chr10 88743381 88743739 -56845549 + MLT1A1 LTR MaLR 1 365 0 4090 235 72 13 chr10 88743739 88744501 -56844787 + L1MEc LINE L1 2976 3691 -2524 1358 221 53 12 chr10 88744579 88744900 -56844388 + MER2 DNA MER2_type 4 337 -8 2968 213 49 83 chr10 88744905 88745373 -56843915 - Tigger4(Zombi) DNA MER2_type -83 2648 2214 2216 58 10 58 chr10 88745373 88745685 -56843603 + AluSp SINE Alu 1 297 -16 2968 213 49 83 chr10 88745685 88745977 -56843311 - Tigger4(Zombi) DNA MER2_type -517 2214 1914 452 113 0 0 chr10 88745977 88746039 -56843249 - MSTA LTR MaLR 0 428 367 1621 185 94 7 chr10 88746042 88746276 -56843012 + L1 LINE L1 3111 3323 -2823 1602 192 22 26 chr10 88746276 88746589 -56842699 + AluJo SINE Alu 1 312 0 1621 185 94 7 chr10 88746589 88746781 -56842507 + L1 LINE L1 3323 3574 -2572 2244 92 7 0 chr10 88747081 88747373 -56841915 - AluSq SINE Alu -19 294 1 22 0 0 0 chr10 88747628 88747650 -56841638 + AT_rich Low_complexity Low_complexity 1 22 0 477 266 38 6 chr10 88747652 88747810 -56841478 - L1MA9 LINE L1 -54 6258 6096 * 717 225 50 10 chr10 88747807 88748007 -56841281 - L1MA9 LINE L1 -592 5720 5513 1566 198 11 101 chr10 88748900 88749335 -56839953 + MSTD LTR MaLR 1 396 0 2673 239 31 9 chr10 88750083 88750722 -56838566 - MER82 DNA MER2_type 0 653 1 4604 181 21 16 chr10 88750994 88751890 -56837398 + MER4D LTR ERV1 1 660 -4 272 357 122 10 chr10 88752247 88752443 -56836845 + LTR33 LTR ERVL 304 521 0 24 0 0 0 chr10 88753280 88753304 -56835984 + AT_rich Low_complexity Low_complexity 1 24 0 248 230 11 35 chr10 88753435 88753522 -56835766 + L1MEc LINE L1 32 116 -6280 1237 270 64 64 chr10 88753589 88754375 -56834913 + L1M4 LINE L1 3377 4162 -1984 27 92 0 0 chr10 88754376 88754452 -56834836 + AT_rich Low_complexity Low_complexity 1 76 0 763 196 6 0 chr10 88754544 88754702 -56834586 - L1MB7 LINE L1 -231 6451 6293 948 235 21 24 chr10 88754718 88755007 -56834281 - L1MB7 LINE L1 -1465 5179 4892 1857 193 51 11 chr10 88755008 88755381 -56833907 - MSTD LTR MaLR 0 396 9 480 256 94 17 chr10 88755391 88755625 -56833663 - L1MB7 LINE L1 -1749 4895 4644 291 207 0 35 chr10 88755625 88755683 -56833605 + polypyrimidine Low_complexity Low_complexity 3 58 0 745 92 31 31 chr10 88755683 88755846 -56833442 + CT-rich Low_complexity Low_complexity 3 165 0 2792 281 49 19 chr10 88755848 88757020 -56832268 - L1MB7 LINE L1 -1951 4693 3487 438 20 0 0 chr10 88757048 88757099 -56832189 + (TG)n Simple_repeat Simple_repeat 2 52 0 1147 227 56 19 chr10 88757100 88757509 -56831779 + MER74A LTR ERVL 16 571 -51 618 266 115 12 chr10 88758522 88758774 -56830514 + L1ME LINE L1 5316 5593 -573 1989 132 73 3 chr10 88758829 88759169 -56830119 + THE1B LTR MaLR 1 364 0 517 327 165 5 chr10 88759750 88760132 -56829156 + Charlie7 DNA MER1_type 228 670 -1942 232 258 22 34 chr10 88760396 88760485 -56828803 + MLT1J1 LTR MaLR 321 408 -38 290 252 56 21 chr10 88760547 88760690 -56828598 + Charlie7 DNA MER1_type 696 843 -1769 529 243 73 5 chr10 88760738 88760944 -56828344 + Charlie7 DNA MER1_type 991 1210 -1402 257 226 16 0 chr10 88761145 88761207 -56828081 + Charlie7 DNA MER1_type 1502 1564 -1048 2654 221 40 41 chr10 88761427 88761599 -56827689 - L1MB7 LINE L1 -5343 1199 1028 1529 139 19 107 chr10 88761599 88761726 -56827562 + AluSx SINE Alu 7 143 -169 1828 168 3 0 chr10 88761726 88762018 -56827270 + AluSx SINE Alu 3 295 -17 1529 139 19 107 chr10 88762018 88762200 -56827088 + AluSx SINE Alu 143 289 -23 546 29 0 0 chr10 88762200 88762268 -56827020 + (CTATA)n Simple_repeat Simple_repeat 3 70 0 2654 221 40 41 chr10 88762268 88762818 -56826470 - L1MB7 LINE L1 -5512 1030 477 5606 135 59 119 chr10 88762886 88764250 -56825038 + pTR5 LTR ERV1 743 2025 -413 356 204 31 20 chr10 88764250 88764348 -56824940 + LTR30 LTR ERV1 544 642 -80 1481 111 4 9 chr10 88764350 88764575 -56824713 + pTR5 LTR ERV1 171 394 -2044 1310 234 54 48 chr10 88764593 88764964 -56824324 - L1MB7 LINE L1 -6157 385 13 649 280 83 17 chr10 88764967 88765403 -56823885 - L1ME LINE L1 -725 5441 4981 579 230 219 0 chr10 88765440 88765705 -56823583 + L1ME LINE L1 4966 5288 -858 1821 155 53 23 chr10 88765705 88766137 -56823151 + LTR56 LTR ERV1 1 445 0 293 161 32 16 chr10 88766139 88766201 -56823087 + LTR23 LTR ERV1 375 437 0 560 288 42 9 chr10 88766202 88766414 -56822874 + L1ME LINE L1 5286 5504 -660 843 188 6 24 chr10 88766737 88766922 -56822366 - MLT1C LTR MaLR -5 462 214 500 200 27 0 chr10 88766953 88767063 -56822225 - L1MA9 LINE L1 -43 6269 6157 1319 216 4 8 chr10 88767088 88767343 -56821945 - MER54B LTR ERVL 0 793 540 239 192 19 0 chr10 88767364 88767416 -56821872 - Alu SINE Alu -249 53 1 217 319 75 21 chr10 88767431 88767525 -56821763 - MIR SINE MIR -148 114 16 238 239 92 85 chr10 88768294 88768424 -56820864 + MIR SINE MIR 101 231 -31 1254 98 4 159 chr10 88768595 88768872 -56820416 + LTR12 LTR ERV1 1 234 -480 250 145 87 29 chr10 88768911 88768980 -56820308 + LTR12 LTR ERV1 205 277 -437 288 260 0 0 chr10 88768980 88769057 -56820231 + LTR30 LTR ERV1 544 620 -102 650 157 50 8 chr10 88769057 88769178 -56820110 + LTR12 LTR ERV1 355 480 -234 431 291 139 0 chr10 88769967 88770125 -56819163 + MIR SINE MIR 39 218 -44 1811 147 149 8 chr10 88770144 88770519 -56818769 + MSTA LTR MaLR 1 428 0 244 114 0 0 chr10 88770851 88770886 -56818402 - MLT1I LTR MaLR -21 388 354 1564 155 35 0 chr10 88770902 88771388 -56817900 + L1MA6 LINE L1 3893 4588 -1558 5679 169 35 13 chr10 88771397 88772881 -56816407 + L1MA6 LINE L1 4774 6295 -5 326 196 0 11 chr10 88773841 88773910 -56815378 - AluS SINE Alu -243 57 6 1254 156 89 117 chr10 88774175 88774567 -56814721 + MLT1B LTR MaLR 1 381 -9 846 324 137 10 chr10 88776330 88776821 -56812467 - L2 LINE L2 -1806 1508 956 383 231 154 23 chr10 88776840 88776970 -56812318 - L2 LINE L2 -2471 843 697 1043 194 0 20 chr10 88776970 88777166 -56812122 - MER20 DNA MER1_type 0 219 28 665 273 158 64 chr10 88777232 88777731 -56811557 - L2 LINE L2 -2617 697 152 252 0 0 0 chr10 88778000 88778028 -56811260 + (TG)n Simple_repeat Simple_repeat 2 29 0 2317 184 58 39 chr10 88778593 88779677 -56809611 + L1MB8 LINE L1 4771 5868 -310 21 36 0 0 chr10 88780055 88780083 -56809205 + AT_rich Low_complexity Low_complexity 1 28 0 2174 256 40 55 chr10 88780201 88781710 -56807578 + L1MC/D LINE L1 58 1870 -4851 1162 249 80 7 chr10 88781697 88782112 -56807176 + L1MC/D LINE L1 5790 6237 -745 * 520 298 66 45 chr10 88782268 88782510 -56806778 + LTR16A LTR ERVL 73 319 -131 211 205 0 0 chr10 88782575 88782614 -56806674 + (CATA)n Simple_repeat Simple_repeat 2 40 0 2171 112 52 0 chr10 88782616 88782946 -56806342 - MER41C LTR ERV1 -207 347 1 1811 183 8 2 chr10 88782949 88783425 -56805863 + L1MC3 LINE L1 7162 7784 -1 29 84 0 0 chr10 88783439 88783510 -56805778 + AT_rich Low_complexity Low_complexity 1 71 0 22 0 0 0 chr10 88783999 88784021 -56805267 + AT_rich Low_complexity Low_complexity 1 22 0 204 304 43 14 chr10 88784608 88784677 -56804611 - L3 LINE CR1 -12 1565 1495 2320 94 0 3 chr10 88784693 88785002 -56804286 + AluSc SINE Alu 1 308 -1 952 256 84 18 chr10 88785635 88786029 -56803259 - L1M4 LINE L1 -1098 5048 4629 359 341 22 33 chr10 88786047 88786317 -56802971 + L1PA13 LINE L1 7 273 -7308 189 0 0 0 chr10 88786505 88786526 -56802762 + (CAGTG)n Simple_repeat Simple_repeat 2 22 0 580 144 0 34 chr10 88787373 88787491 -56801797 + L1PA13 LINE L1 2321 2434 -5140 245 200 0 0 chr10 88837615 88837655 -56751633 + L1MCb LINE L1 522 561 -5484 1693 245 47 17 chr10 88837784 88838669 -56750619 + L1MCb LINE L1 580 1493 -4851 659 157 50 8 chr10 88839173 88839294 -56749994 - LTR12 LTR ERV1 -234 480 355 290 260 0 0 chr10 88839294 88839371 -56749917 - LTR30 LTR ERV1 -102 620 544 256 145 87 29 chr10 88839371 88839440 -56749848 - LTR12 LTR ERV1 -437 277 205 1039 149 14 27 chr10 88839478 88839687 -56749601 - LTR12 LTR ERV1 -455 1983 55 225 289 0 0 chr10 88839704 88839756 -56749532 - LTR30 LTR ERV1 -670 52 1 326 196 0 11 chr10 88840224 88840293 -56748995 + AluS SINE Alu 6 57 -244 3272 153 32 7 chr10 88841253 88841843 -56747445 - L1MA6 LINE L1 -5 6295 5691 1830 61 11 69 chr10 88841944 88842205 -56747083 - AluSp SINE Alu -67 246 1 2494 129 32 7 chr10 88842205 88842615 -56746673 + Tigger4(Zombi) DNA MER2_type 2229 2648 -83 1405 221 49 12 chr10 88842620 88842945 -56746343 - MER2 DNA MER2_type -8 337 1 320 228 127 0 chr10 88842945 88843022 -56746266 + Tigger4(Zombi) DNA MER2_type 2645 2731 0 2089 260 36 1 chr10 88843022 88843781 -56745507 - L1M4 LINE L1 -2525 3621 2837 1594 223 26 3 chr10 88843782 88844092 -56745196 - MLT1A1 LTR MaLR 0 365 49 5477 156 23 72 chr10 88844197 88845116 -56744172 - L1MA6 LINE L1 -744 5402 4714 249 57 0 0 chr10 88845116 88845151 -56744137 + (TG)n Simple_repeat Simple_repeat 2 36 0 5477 156 23 72 chr10 88845151 88845712 -56743576 - L1MA6 LINE L1 -1432 4714 4127 989 234 59 16 chr10 88845711 88846015 -56743273 - L1M4 LINE L1 -1817 4827 4511 * 218 319 75 21 chr10 88846912 88847006 -56742282 + MIR SINE MIR 16 114 -148 249 192 19 0 chr10 88847021 88847073 -56742215 + Alu SINE Alu 1 53 -250 1352 216 4 4 chr10 88847094 88847348 -56741940 + MER54B LTR ERVL 540 793 0 483 189 28 0 chr10 88847373 88847479 -56741809 + L1MA9 LINE L1 6157 6265 -47 880 181 6 23 chr10 88847514 88847704 -56741584 + MLT1C LTR MaLR 214 467 0 622 208 30 12 chr10 88847705 88847873 -56741415 - L1M4 LINE L1 -5343 1199 1029 862 112 31 168 chr10 88847877 88848004 -56741284 + AluSq SINE Alu 7 99 -214 1855 168 3 0 chr10 88848004 88848296 -56740992 + AluSx SINE Alu 3 295 -17 862 112 31 168 chr10 88848296 88848364 -56740924 + AluSq SINE Alu 99 175 -138 327 211 29 29 chr10 88848538 88848642 -56740646 + L1M4 LINE L1 2693 2796 -3350 2197 169 37 11 chr10 88848840 88849218 -56740070 + MER61D LTR ERV1 114 501 0 4567 105 219 129 chr10 88849284 88849359 -56739929 - pTR5 LTR ERV1 0 2438 2371 2560 26 7 7 chr10 88849359 88849661 -56739627 - AluY SINE Alu -9 302 1 4567 105 219 129 chr10 88849661 88850961 -56738327 - pTR5 LTR ERV1 -67 2371 835 2276 92 7 0 chr10 88851361 88851653 -56737635 + AluSq SINE Alu 1 294 -19 1585 185 94 7 chr10 88851953 88852145 -56737143 - L1 LINE L1 -2572 3574 3400 1618 192 22 26 chr10 88852145 88852458 -56736830 - AluJo SINE Alu 0 312 1 1585 185 94 7 chr10 88852458 88852692 -56736596 - L1 LINE L1 -2746 3400 3111 449 113 0 0 chr10 88852695 88852757 -56736531 + MSTA LTR MaLR 367 428 0 2190 163 69 11 chr10 88852757 88853049 -56736239 + Tigger4(Zombi) DNA MER2_type 1914 2244 -487 2247 64 10 55 chr10 88853049 88853360 -56735928 - AluSp SINE Alu -16 297 1 2190 163 69 11 chr10 88853360 88853528 -56735760 + Tigger4(Zombi) DNA MER2_type 2244 2401 -330 1579 198 11 101 chr10 88854546 88854981 -56734307 + MSTD LTR MaLR 1 396 0 2671 239 31 9 chr10 88855729 88856368 -56732920 - MER82 DNA MER2_type 0 653 1 4593 181 21 16 chr10 88856640 88857536 -56731752 + MER4D LTR ERV1 1 660 -4 268 357 122 10 chr10 88857893 88858089 -56731199 + LTR33 LTR ERVL 304 521 0 1254 156 89 117 chr10 88858948 88859340 -56729948 + MLT1B LTR MaLR 1 381 -9 846 324 137 10 chr10 88861103 88861594 -56727694 - L2 LINE L2 -1806 1508 956 383 231 154 23 chr10 88861613 88861743 -56727545 - L2 LINE L2 -2471 843 697 1043 194 0 20 chr10 88861743 88861939 -56727349 - MER20 DNA MER1_type 0 219 28 665 273 158 64 chr10 88862005 88862504 -56726784 - L2 LINE L2 -2617 697 152 252 0 0 0 chr10 88862773 88862801 -56726487 + (TG)n Simple_repeat Simple_repeat 2 29 0 2317 184 58 39 chr10 88863366 88864450 -56724838 + L1MB8 LINE L1 4771 5868 -310 21 36 0 0 chr10 88864828 88864856 -56724432 + AT_rich Low_complexity Low_complexity 1 28 0 843 285 36 13 chr10 88864974 88865315 -56723973 + L1MCc LINE L1 58 749 -5673 772 252 93 9 chr10 88865418 88865734 -56723554 + L1MC/D LINE L1 5096 5442 -745 520 298 66 45 chr10 88865890 88866132 -56723156 + LTR16A LTR ERVL 73 319 -131 211 205 0 0 chr10 88866197 88866236 -56723052 + (CATA)n Simple_repeat Simple_repeat 2 40 0 2186 109 52 0 chr10 88866238 88866568 -56722720 - MER41C LTR ERV1 -207 347 1 1811 183 8 2 chr10 88866571 88867047 -56722241 + L1MC3 LINE L1 7162 7784 -1 29 84 0 0 chr10 88867061 88867132 -56722156 + AT_rich Low_complexity Low_complexity 1 71 0 190 319 43 14 chr10 88867702 88867771 -56721517 - L3 LINE CR1 -12 1565 1495 2320 94 0 3 chr10 88867787 88868096 -56721192 + AluSc SINE Alu 1 308 -1 952 256 84 18 chr10 88868729 88869123 -56720165 - L1M4 LINE L1 -1098 5048 4629 359 341 22 33 chr10 88869141 88869411 -56719877 + L1PA15 LINE L1 7 273 -7308 189 0 0 0 chr10 88869599 88869620 -56719668 + (CAGTG)n Simple_repeat Simple_repeat 2 22 0 15477 216 17 12 chr10 88870467 88870611 -56718677 + L1PA15 LINE L1 2321 2463 -5140 282 29 0 0 chr10 88870611 88870646 -56718642 + (CA)n Simple_repeat Simple_repeat 2 36 0 15477 216 17 12 chr10 88870646 88874700 -56714588 + L1PA15 LINE L1 2463 6570 -1033 207 25 75 0 chr10 88874700 88874740 -56714548 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 15477 216 17 12 chr10 88874740 88875762 -56713526 + L1PA15 LINE L1 6570 7585 -18 599 222 53 26 chr10 88876024 88876213 -56713075 - L1M4 LINE L1 -1525 4621 4428 * 1062 132 6 0 chr10 88876205 88876379 -56712909 - L1M2 LINE L1 -635 5665 5491 24 0 0 0 chr10 88876496 88876520 -56712768 + AT_rich Low_complexity Low_complexity 1 24 0 250 215 12 36 chr10 88876651 88876738 -56712550 + L1MEc LINE L1 32 116 -6280 1224 271 64 64 chr10 88876805 88877591 -56711697 + L1M4 LINE L1 3377 4162 -1984 27 92 0 0 chr10 88877592 88877668 -56711620 + AT_rich Low_complexity Low_complexity 1 76 0 763 196 6 0 chr10 88877760 88877918 -56711370 - L1MB7 LINE L1 -231 5953 5795 948 235 21 24 chr10 88877934 88878223 -56711065 - L1MB7 LINE L1 -1465 4681 4394 1857 193 51 11 chr10 88878224 88878597 -56710691 - MSTD LTR MaLR 0 396 9 480 256 94 17 chr10 88878607 88878841 -56710447 - L1MB7 LINE L1 -1749 4397 4146 291 207 0 35 chr10 88878841 88878899 -56710389 + polypyrimidine Low_complexity Low_complexity 3 58 0 745 92 31 31 chr10 88878899 88879062 -56710226 + CT-rich Low_complexity Low_complexity 3 165 0 2792 281 49 19 chr10 88879064 88880236 -56709052 - L1MB7 LINE L1 -1951 4195 2989 438 20 0 0 chr10 88880264 88880315 -56708973 + (TG)n Simple_repeat Simple_repeat 2 52 0 1147 227 56 19 chr10 88880316 88880725 -56708563 + MER74A LTR ERVL 16 571 -51 618 266 115 12 chr10 88881738 88881990 -56707298 + L1ME LINE L1 5316 5593 -573 1989 132 73 3 chr10 88882045 88882385 -56706903 + THE1B LTR MaLR 1 364 0 517 327 165 5 chr10 88882966 88883348 -56705940 + Charlie7 DNA MER1_type 228 670 -1942 232 258 22 34 chr10 88883612 88883701 -56705587 + MLT1J1 LTR MaLR 321 408 -38 544 248 93 13 chr10 88883763 88884160 -56705128 + Charlie7 DNA MER1_type 696 1210 -1402 344 251 136 37 chr10 88884361 88884552 -56704736 + Charlie7 DNA MER1_type 1502 1711 -901 560 288 42 9 chr10 88884666 88884878 -56704410 - L1ME LINE L1 -658 5504 5286 293 161 32 16 chr10 88884879 88884941 -56704347 - LTR23 LTR ERV1 0 437 375 1821 155 53 23 chr10 88884943 88885375 -56703913 - LTR56 LTR ERV1 0 445 1 579 230 219 0 chr10 88885375 88885640 -56703648 - L1ME LINE L1 -858 5288 4966 649 280 83 17 chr10 88885677 88886113 -56703175 + L1ME LINE L1 4981 5441 -725 1310 234 54 48 chr10 88886116 88886487 -56702801 + L1M4 LINE L1 13 385 -6157 1481 111 4 9 chr10 88886505 88886730 -56702558 - pTR5 LTR ERV1 -2044 394 171 356 204 31 20 chr10 88886732 88886830 -56702458 - LTR30 LTR ERV1 -80 642 544 5606 135 59 119 chr10 88886830 88888194 -56701094 - pTR5 LTR ERV1 -413 2025 743 2007 228 39 44 chr10 88888262 88888807 -56700481 + L1M4 LINE L1 477 1018 -5524 372 22 0 0 chr10 88888813 88888858 -56700430 + (TATAG)n Simple_repeat Simple_repeat 1 45 0 431 291 139 0 chr10 88889225 88889383 -56699905 + MIR SINE MIR 39 218 -44 1811 147 149 8 chr10 88889402 88889777 -56699511 + MSTA LTR MaLR 1 428 0 244 114 0 0 chr10 88890109 88890144 -56699144 - MLT1I LTR MaLR -21 388 354 1564 155 35 0 chr10 88890160 88890646 -56698642 + L1 LINE L1 3893 4588 -1558 1060 250 10 10 chr10 88890655 88890943 -56698345 + L1 LINE L1 4774 5061 -1085 4731 151 35 17 chr10 88891059 88891816 -56697472 - L1PA16 LINE L1 -68 6098 5318 2264 107 0 3 chr10 88891816 88892126 -56697162 - AluSc SINE Alu 0 309 1 4731 151 35 17 chr10 88892126 88892563 -56696725 - L1PA16 LINE L1 -848 5318 4890 2580 259 79 12 chr10 88892557 88893955 -56695333 - L1M4 LINE L1 -2631 3751 2261 * 3028 179 22 8 chr10 88893955 88894587 -56694701 - L1MC2 LINE L1 -9 6335 5695 1358 228 15 23 chr10 88894589 88894979 -56694309 - L1MC2 LINE L1 -941 5205 4819 2005 163 47 6 chr10 88896915 88897278 -56692010 - L1PA15 LINE L1 0 6165 5788 6317 190 18 18 chr10 88897283 88898329 -56690959 + L1P4 LINE L1 3934 4978 -1187 2241 139 8 35 chr10 88898329 88898703 -56690585 - THE1B LTR MaLR 0 364 1 6317 190 18 18 chr10 88898703 88899220 -56690068 + L1P4 LINE L1 4978 5494 -671 24 67 0 0 chr10 88899575 88899620 -56689668 + AT_rich Low_complexity Low_complexity 1 45 0 1614 258 56 65 chr10 88899837 88901019 -56688269 + L1MC5 LINE L1 6414 7595 -366 1722 75 0 0 chr10 88901177 88901404 -56687884 - L1PA5 LINE L1 0 6154 5928 247 67 0 0 chr10 88901404 88901434 -56687854 + L1PA5 LINE L1 5904 5933 -221 808 273 64 32 chr10 88901591 88901935 -56687353 + L1ME3 LINE L1 5733 6087 -75 499 219 48 43 chr10 88901960 88902170 -56687118 + L1MC5 LINE L1 7570 7780 -181 307 325 0 0 chr10 88902177 88902300 -56686988 + L1M4 LINE L1 2465 2587 -3559 3240 223 91 12 chr10 88902443 88903949 -56685339 - L1MCa LINE L1 -3407 2808 1295 2194 97 30 0 chr10 88904999 88905298 -56683990 - AluSp SINE Alu 0 313 6 698 261 119 15 chr10 88906213 88906361 -56682927 + L1MB7 LINE L1 927 1058 -5083 194 0 39 0 chr10 88906361 88906387 -56682901 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 698 261 119 15 chr10 88906387 88906498 -56682790 + L1MB7 LINE L1 1058 1213 -4928 671 195 0 26 chr10 88906498 88906652 -56682636 + L1MB7 LINE L1 3032 3181 -3029 * 8068 131 38 2 chr10 88906648 88907874 -56681414 + THE1C-int LTR MaLR 312 1580 0 1836 154 55 22 chr10 88907874 88908237 -56681051 + THE1C LTR MaLR 1 375 0 21206 161 15 8 chr10 88908243 88908784 -56680504 + L1P4 LINE L1 1408 1943 -4225 189 0 0 0 chr10 88908784 88908805 -56680483 + (CCCTG)n Simple_repeat Simple_repeat 5 25 0 21206 161 15 8 chr10 88908805 88912447 -56676841 + L1P4 LINE L1 1943 5619 -549 600 150 0 102 chr10 88912447 88912574 -56676714 - THE1B LTR MaLR -250 114 1 9416 130 56 8 chr10 88912574 88914039 -56675249 - THE1B-int LTR MaLR 0 1580 45 5397 174 23 5 chr10 88914039 88915025 -56674263 - Tigger4(Zombi) DNA MER2_type -820 1911 908 1332 225 41 3 chr10 88915129 88915467 -56673821 + L1MB7 LINE L1 3598 3948 -2262 404 236 16 32 chr10 88915482 88915605 -56673683 + L1MB7 LINE L1 4857 4977 -1233 * 1775 226 142 10 chr10 88915590 88916104 -56673184 + L1MB7 LINE L1 5649 6230 -18 240 280 48 24 chr10 88916147 88916272 -56673016 + L1MC5 LINE L1 7801 7928 -33 21 57 0 0 chr10 88918247 88918282 -56671006 + AT_rich Low_complexity Low_complexity 1 35 0 184 333 54 31 chr10 88919001 88919130 -56670158 - L2 LINE L2 -457 2857 2726 341 339 37 0 chr10 88919141 88919250 -56670038 - MIR SINE MIR -136 126 14 258 356 133 25 chr10 88919945 88920142 -56669146 + L2 LINE L2 2606 2843 -471 2030 119 6 13 chr10 88920142 88920453 -56668835 - AluSx SINE Alu -3 309 1 258 356 133 25 chr10 88920453 88920533 -56668755 + L2 LINE L2 2843 2913 -401 274 259 125 9 chr10 88920731 88920843 -56668445 + L2 LINE L2 3189 3313 0 355 299 112 14 chr10 88920844 88921058 -56668230 + L1MB8 LINE L1 3651 3885 -2261 385 288 127 77 chr10 88921833 88921937 -56667351 + L1MB8 LINE L1 4509 4606 -1540 1334 126 26 4 chr10 88921937 88922167 -56667121 - L1PB2 LINE L1 -7 6144 5910 385 288 127 77 chr10 88922167 88922385 -56666903 + L1MB8 LINE L1 4606 4847 -1299 197 350 91 28 chr10 88923024 88923167 -56666121 - MIR SINE MIR -91 171 20 493 178 0 11 chr10 88923779 88923869 -56665419 + FLAM_C SINE Alu 29 117 -26 366 23 0 0 chr10 88923869 88923912 -56665376 + (CA)n Simple_repeat Simple_repeat 2 44 0 182 61 0 30 chr10 88924249 88924282 -56665006 + (TTG)n Simple_repeat Simple_repeat 2 33 0 605 225 6 56 chr10 88924774 88924952 -56664336 - L1M4 LINE L1 -3328 2818 2650 2204 221 33 6 chr10 88924964 88925476 -56663812 + L1MB8 LINE L1 5653 6178 0 267 286 82 19 chr10 88925475 88925681 -56663607 - L1M4 LINE L1 -3496 2650 2432 * 24 85 0 0 chr10 88925712 88925771 -56663517 + AT_rich Low_complexity Low_complexity 1 59 0 2447 63 0 0 chr10 88926391 88926694 -56662594 - AluY SINE Alu -8 303 1 1920 142 6 25 chr10 88926770 88927088 -56662200 - AluSx SINE Alu 0 312 1 224 258 15 0 chr10 88927384 88927450 -56661838 + (TA)n Simple_repeat Simple_repeat 2 68 0 22 0 0 0 chr10 88930060 88930082 -56659206 + AT_rich Low_complexity Low_complexity 1 22 0 2025 97 13 30 chr10 88930083 88930260 -56659028 + AluY SINE Alu 1 179 -132 207 0 0 0 chr10 88930260 88930283 -56659005 + (CTA)n Simple_repeat Simple_repeat 2 24 0 2025 97 13 30 chr10 88930283 88930391 -56658897 + AluY SINE Alu 179 283 -28 252 0 0 0 chr10 88930391 88930419 -56658869 + (CAAT)n Simple_repeat Simple_repeat 1 28 0 2025 97 13 30 chr10 88930419 88930432 -56658856 + AluY SINE Alu 283 295 -16 21 36 0 0 chr10 88931218 88931246 -56658042 + AT_rich Low_complexity Low_complexity 1 28 0 209 151 19 0 chr10 88931841 88931894 -56657394 + (TATAA)n Simple_repeat Simple_repeat 3 56 0 21 0 0 0 chr10 88932802 88932823 -56656465 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr10 88935411 88935446 -56653842 + AT_rich Low_complexity Low_complexity 1 35 0 204 139 70 0 chr10 88935781 88935824 -56653464 + A-rich Low_complexity Low_complexity 2 47 0 389 376 9 14 chr10 88936955 88937176 -56652112 - MIR SINE MIR -34 228 9 24 91 0 0 chr10 88937218 88937284 -56652004 + AT_rich Low_complexity Low_complexity 1 66 0 21 57 0 0 chr10 88937361 88937396 -56651892 + AT_rich Low_complexity Low_complexity 1 35 0 612 260 315 22 chr10 88938167 88938545 -56650743 - L2 LINE L2 -343 2971 2469 1878 176 21 19 chr10 88938545 88938919 -56650369 - THE1C LTR MaLR 0 375 1 612 260 315 22 chr10 88938919 88938940 -56650348 - L2 LINE L2 -845 2469 2455 324 363 31 0 chr10 88939141 88939301 -56649987 + L1MC/D LINE L1 5479 5643 -2165 3779 104 24 14 chr10 88939402 88939989 -56649299 - L1PA10 LINE L1 -1 6167 5575 739 136 0 16 chr10 88939989 88940107 -56649181 - L1P LINE L1 -2101 4045 3928 257 315 36 18 chr10 88940256 88940367 -56648921 + MIR SINE MIR 150 262 0 2093 143 138 5 chr10 88940395 88940773 -56648515 + MSTA LTR MaLR 1 428 0 9282 175 17 7 chr10 88940773 88942402 -56646886 + MSTA-int LTR MaLR 1 1645 -6 1842 141 121 45 chr10 88942408 88942806 -56646482 + MSTA LTR MaLR 1 428 0 27 0 0 0 chr10 88943362 88943389 -56645899 + AT_rich Low_complexity Low_complexity 1 27 0 22 0 0 0 chr10 88943677 88943699 -56645589 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr10 88945253 88945282 -56644006 + AT_rich Low_complexity Low_complexity 1 29 0 26 0 0 0 chr10 88945341 88945367 -56643921 + AT_rich Low_complexity Low_complexity 1 26 0 939 320 68 42 chr10 88945935 88946266 -56643022 + L2 LINE L2 2446 2767 -546 2071 133 0 7 chr10 88946266 88946574 -56642714 + AluSx SINE Alu 1 306 -6 939 320 68 42 chr10 88946574 88947085 -56642203 + L2 LINE L2 2767 3313 0 431 246 99 35 chr10 88947112 88947254 -56642034 + MLT1L LTR MaLR 465 615 0 1838 161 0 55 chr10 88948205 88948534 -56640754 - AluSx SINE Alu -1 311 1 21 82 0 0 chr10 88949052 88949101 -56640187 + AT_rich Low_complexity Low_complexity 1 49 0 234 254 0 0 chr10 88949708 88949767 -56639521 - L1MC5 LINE L1 -74 7887 7829 853 244 41 0 chr10 88950085 88950331 -56638957 + L1M4 LINE L1 1070 1325 -5217 524 200 72 4 chr10 88950321 88950543 -56638745 - L1M4 LINE L1 -5488 1054 773 * 240 341 8 39 chr10 88950543 88950672 -56638616 + L1M4 LINE L1 2332 2456 -4190 499 226 90 17 chr10 88950696 88950873 -56638415 - L1M4 LINE L1 -1805 4341 4152 369 0 0 0 chr10 88950881 88950892 -56638396 + (CA)n Simple_repeat Simple_repeat 1 52 0 369 0 0 0 chr10 88950892 88950933 -56638355 + (CA)n Simple_repeat Simple_repeat 2 42 0 243 195 34 34 chr10 88951030 88951148 -56638140 + (TA)n Simple_repeat Simple_repeat 1 118 0 239 242 0 11 chr10 88951185 88951280 -56638008 + (TA)n Simple_repeat Simple_repeat 1 94 0 561 165 58 10 chr10 88951307 88951410 -56637878 - FRAM SINE Alu -37 139 32 270 247 49 0 chr10 88951531 88951612 -56637676 + MER110 LTR ERV1 2 86 -405 732 231 32 82 chr10 88951675 88951956 -56637332 + MER110 LTR ERV1 79 345 -146 680 214 121 15 chr10 88951989 88952026 -56637262 - L1MA9 LINE L1 -38 6274 6242 492 62 0 0 chr10 88952026 88952090 -56637198 + (TA)n Simple_repeat Simple_repeat 1 64 0 680 214 121 15 chr10 88952090 88952258 -56637030 - L1MA9 LINE L1 -70 6242 6047 243 212 0 47 chr10 88952251 88952336 -56636952 - L1MB2 LINE L1 -145 6026 5946 * 229 235 10 10 chr10 88953500 88953602 -56635686 + (TA)n Simple_repeat Simple_repeat 1 102 0 22 35 0 0 chr10 88953616 88953645 -56635643 + AT_rich Low_complexity Low_complexity 1 29 0 4155 176 34 53 chr10 88953663 88954886 -56634402 - L1MA9 LINE L1 -14 6298 5090 9293 19 0 1 chr10 88954886 88956740 -56632548 + L1PA3 LINE L1 4299 6150 -5 1311 228 45 34 chr10 88957054 88957498 -56631790 - L1MA9 LINE L1 -1110 5036 4588 * 5233 215 31 53 chr10 88957482 88958276 -56631012 - L1 LINE L1 -1447 4699 3952 2507 54 3 0 chr10 88958276 88958591 -56630697 + L1PA5 LINE L1 5835 6150 -4 5233 215 31 53 chr10 88958591 88959323 -56629965 - L1 LINE L1 -2194 3952 3206 636 168 0 0 chr10 88959356 88959457 -56629831 - AluJ SINE Alu -21 291 191 933 35 0 0 chr10 88959458 88959571 -56629717 - L1PA5 LINE L1 -1132 5014 4902 7018 54 2 9 chr10 88959571 88960723 -56628565 + L1PA5 LINE L1 5004 6149 -5 983 213 5 10 chr10 88960736 88960938 -56628350 - AluJ SINE Alu -111 201 1 1796 141 106 6 chr10 88961103 88961444 -56627844 + THE1C LTR MaLR 1 375 0 335 335 57 26 chr10 88961690 88962078 -56627210 - HAL1 LINE L1 -855 1652 1253 22 0 0 0 chr10 88963090 88963112 -56626176 + AT_rich Low_complexity Low_complexity 1 22 0 2049 126 7 3 chr10 88963599 88963900 -56625388 - AluSx SINE Alu -10 302 1 2294 102 0 0 chr10 88964655 88964958 -56624330 + AluSg SINE Alu 1 303 -7 414 0 0 0 chr10 88964959 88965005 -56624283 + (TA)n Simple_repeat Simple_repeat 1 46 0 1025 304 81 66 chr10 88965630 88965847 -56623441 - L2 LINE L2 -1 3312 3100 2078 147 9 3 chr10 88965847 88966188 -56623100 + MER61A LTR ERV1 1 343 0 1025 304 81 66 chr10 88966188 88966573 -56622715 - L2 LINE L2 -213 3100 2694 1788 134 0 61 chr10 88966573 88966901 -56622387 - AluSx SINE Alu -4 308 1 1025 304 81 66 chr10 88966901 88967176 -56622112 - L2 LINE L2 -619 2694 2425 313 293 101 10 chr10 88967608 88967707 -56621581 - L2 LINE L2 -523 2791 2684 30 27 0 0 chr10 88968625 88968662 -56620626 + AT_rich Low_complexity Low_complexity 1 37 0 2327 166 64 46 chr10 88968674 88969191 -56620097 - L1MA9 LINE L1 0 6312 5787 189 0 0 0 chr10 88969218 88969239 -56620049 + (GA)n Simple_repeat Simple_repeat 1 21 0 1384 174 84 3 chr10 88969240 88969573 -56619715 - L1 LINE L1 -2553 5012 4653 2416 269 58 23 chr10 88969618 88970778 -56618510 - L1 LINE L1 -3851 3714 2544 1637 276 23 2 chr10 88970777 88971175 -56618113 - L1 LINE L1 -5734 1762 1357 * 240 318 51 17 chr10 88971642 88971756 -56617532 - MIR SINE MIR -59 149 33 306 314 8 0 chr10 88972323 88972441 -56616847 - HAL1b LINE L1 -52 1296 1178 554 245 98 85 chr10 88972457 88972906 -56616382 - HAL1b LINE L1 -239 1109 655 21 71 0 0 chr10 88973187 88973229 -56616059 + AT_rich Low_complexity Low_complexity 1 42 0 484 272 98 60 chr10 88973244 88973681 -56615607 - HAL1b LINE L1 -806 542 89 227 216 68 0 chr10 88973826 88973914 -56615374 - L1ME LINE L1 -196 5925 5832 366 196 78 10 chr10 88973920 88974022 -56615266 - L1MC3 LINE L1 0 7785 7677 3018 89 2 16 chr10 88974022 88974449 -56614839 - L1PA11 LINE L1 -5 6169 5749 2647 93 5 0 chr10 88974894 88975261 -56614027 - L1PB1 LINE L1 -1 6150 5782 541 58 18 80 chr10 88975302 88975580 -56613708 + (TA)n Simple_repeat Simple_repeat 1 260 0 227 111 0 0 chr10 88975580 88975616 -56613672 - L1P5 LINE L1 -332 5819 5784 561 33 40 73 chr10 88975646 88975927 -56613361 + (TA)n Simple_repeat Simple_repeat 1 271 0 241 105 0 0 chr10 88975938 88975976 -56613312 - L1P5 LINE L1 -332 5819 5782 545 95 6 71 chr10 88975976 88976145 -56613143 + (TA)n Simple_repeat Simple_repeat 1 158 0 9575 192 8 18 chr10 88976155 88979426 -56609862 - L1P5 LINE L1 -359 5792 2581 4056 133 34 36 chr10 88979424 88980336 -56608952 - L1PBa LINE L1 -3814 3048 2065 * 29 70 0 0 chr10 88980939 88980996 -56608292 + AT_rich Low_complexity Low_complexity 1 57 0 251 331 29 14 chr10 88981182 88981321 -56607967 + L1MD2 LINE L1 5455 5595 -526 401 0 20 0 chr10 88981408 88981457 -56607831 + (TG)n Simple_repeat Simple_repeat 2 51 0 5828 211 26 16 chr10 88981477 88982924 -56606364 - L1P LINE L1 -813 5341 3885 4433 69 25 3 chr10 88982972 88983603 -56605685 + L1PA8A LINE L1 5519 6162 0 29 71 4 0 chr10 88984036 88984150 -56605138 + AT_rich Low_complexity Low_complexity 1 78 0 780 150 36 0 chr10 88984724 88984864 -56604424 - L1MC/D LINE L1 -651 5591 5447 2591 227 41 27 chr10 88984872 88985528 -56603760 + L1MD2 LINE L1 5688 6352 -7 240 312 56 40 chr10 88985907 88986032 -56603256 - LTR33A LTR ERVL -94 429 303 35 54 0 0 chr10 88986420 88986476 -56602812 + AT_rich Low_complexity Low_complexity 1 56 0 425 348 22 40 chr10 88986624 88986900 -56602388 + Charlie2 DNA MER1_type 1 271 -2591 1066 281 160 18 chr10 88986998 88987843 -56601445 + Charlie2b DNA MER1_type 1140 2104 -678 286 214 86 17 chr10 88987896 88988013 -56601275 + Charlie2b DNA MER1_type 2316 2440 -342 212 208 19 0 chr10 88988267 88988320 -56600968 + A-rich Low_complexity Low_complexity 3 56 0 560 149 0 21 chr10 88989208 88989302 -56599986 - MER8 DNA MER2_type 0 239 148 1272 189 62 4 chr10 88989308 88989567 -56599721 + AluJo SINE Alu 5 278 -34 180 97 0 0 chr10 88989581 88989612 -56599676 + (CAAG)n Simple_repeat Simple_repeat 2 32 0 14299 143 35 11 chr10 88989722 88989888 -56599400 - L1M1 LINE L1 -4098 3467 3307 207 0 0 0 chr10 88989888 88989911 -56599377 + (CAAG)n Simple_repeat Simple_repeat 1 23 0 14299 143 35 11 chr10 88989911 88990816 -56598472 - L1M1 LINE L1 -4258 3307 2426 2286 110 0 7 chr10 88990816 88991126 -56598162 + AluSx SINE Alu 1 308 -4 14299 143 35 11 chr10 88991126 88992470 -56596818 - L1M1 LINE L1 -5139 2426 992 334 250 115 0 chr10 88992478 88992574 -56596714 - L1M4 LINE L1 -534 5880 5774 750 146 0 0 chr10 88992652 88992762 -56596526 + L1M1 LINE L1 1613 1722 -5843 2148 88 0 0 chr10 88992765 88993038 -56596250 - AluSx SINE Alu -39 273 1 1393 263 31 15 chr10 88993038 88993518 -56595770 - L1M4 LINE L1 -2317 4065 3578 22 80 0 0 chr10 88993526 88993576 -56595712 + AT_rich Low_complexity Low_complexity 1 50 0 254 210 84 25 chr10 88993820 88993939 -56595349 - Charlie2 DNA MER1_type -342 2520 2395 2645 260 98 17 chr10 88993984 88994620 -56594668 - L1MEc LINE L1 -2808 3574 2991 192 97 0 0 chr10 88994620 88994651 -56594637 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2645 260 98 17 chr10 88994651 88995302 -56593986 - L1MEc LINE L1 -3391 2991 2210 300 275 92 25 chr10 88995305 88995425 -56593863 - L1MC4 LINE L1 -1340 6702 6575 320 225 85 131 chr10 88995462 88995698 -56593590 - L1MEc LINE L1 -4441 2122 1898 1744 255 47 40 chr10 88995862 88996604 -56592684 - L1MEc LINE L1 -4552 1832 1086 621 200 75 49 chr10 88996607 88996890 -56592398 - L1MCa LINE L1 -3938 2488 2194 * 4620 195 19 40 chr10 88996887 88997567 -56591721 - L1MC1 LINE L1 0 6831 6179 1757 129 3 56 chr10 88997567 88997870 -56591418 - AluSx SINE Alu -23 289 3 4620 195 19 40 chr10 88997870 88998241 -56591047 - L1MC1 LINE L1 -652 6179 5802 * 6188 251 74 17 chr10 88998231 89000554 -56588734 - L1MC1 LINE L1 -1310 5334 2880 2138 98 0 0 chr10 89001002 89001306 -56587982 + AluY SINE Alu 10 313 0 408 290 49 87 chr10 89001721 89002007 -56587281 - HAL1 LINE L1 -868 1639 1365 1045 130 26 0 chr10 89002063 89002255 -56587033 - L1MA4 LINE L1 0 6300 6104 27 49 0 0 chr10 89002340 89002381 -56586907 + AT_rich Low_complexity Low_complexity 1 41 0 1501 258 89 13 chr10 89002535 89003073 -56586215 - L1MC4a LINE L1 0 7808 7230 909 233 55 37 chr10 89003080 89003351 -56585937 - MLT1E LTR MaLR 0 593 318 1310 284 75 19 chr10 89003457 89004027 -56585261 - L1MC4a LINE L1 -1953 5855 5254 300 299 41 74 chr10 89004041 89004285 -56585003 - L1MC4a LINE L1 -918 5228 4993 258 0 23 45 chr10 89004288 89004332 -56584956 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 7642 19 4 4 chr10 89004332 89005300 -56583988 - L1PA2 LINE L1 -16 6139 5172 769 194 46 15 chr10 89005417 89005613 -56583675 - L1MC1 LINE L1 -6327 215 14 277 278 57 16 chr10 89006553 89006747 -56582541 - L1MC4a LINE L1 -1488 4658 4457 237 299 0 13 chr10 89006789 89006877 -56582411 + CT-rich Low_complexity Low_complexity 2 145 0 349 284 106 55 chr10 89006935 89007153 -56582135 - L1MC4a LINE L1 -1871 4275 4047 241 135 39 0 chr10 89007182 89007234 -56582054 + (TA)n Simple_repeat Simple_repeat 2 55 0 2345 110 0 0 chr10 89007251 89007561 -56581727 - AluSx SINE Alu -2 310 1 23 33 0 0 chr10 89007681 89007711 -56581577 + AT_rich Low_complexity Low_complexity 1 30 0 343 352 57 13 chr10 89007728 89007958 -56581330 - L1MC4a LINE L1 -2292 3854 3615 713 323 72 17 chr10 89008311 89008765 -56580523 + L2 LINE L2 2752 3239 -74 2353 72 0 10 chr10 89009013 89009320 -56579968 - AluY SINE Alu -7 304 1 257 311 11 0 chr10 89009621 89009711 -56579577 + (CTA)n Simple_repeat Simple_repeat 1 91 0 2112 258 83 20 chr10 89009871 89011291 -56577997 - L1ME1 LINE L1 -65 6101 4601 22 0 0 0 chr10 89011748 89011770 -56577518 + AT_rich Low_complexity Low_complexity 1 22 0 482 329 42 40 chr10 89011996 89012376 -56576912 - L1MC4a LINE L1 -1935 5873 5493 209 356 11 11 chr10 89012381 89012468 -56576820 - L2 LINE L2 -1 3271 3185 21 0 0 0 chr10 89012639 89012660 -56576628 + AT_rich Low_complexity Low_complexity 1 21 0 27 0 0 0 chr10 89012777 89012804 -56576484 + AT_rich Low_complexity Low_complexity 1 27 0 356 191 0 0 chr10 89013272 89013335 -56575953 + MLT1E2 LTR MaLR 89 151 -503 746 264 119 47 chr10 89013425 89013743 -56575545 + MLT1E2 LTR MaLR 208 548 -78 261 0 0 0 chr10 89013758 89013787 -56575501 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1508 130 41 27 chr10 89013795 89014088 -56575200 - L1MA9 LINE L1 -11 6301 6005 554 175 88 0 chr10 89014091 89014205 -56575083 - L1MA9 LINE L1 -593 5719 5596 1452 163 36 30 chr10 89014214 89014623 -56574665 - L1MA9 LINE L1 -754 5392 5057 239 286 0 0 chr10 89015381 89015437 -56573851 - HAL1 LINE L1 -619 1888 1833 401 327 20 20 chr10 89015493 89015643 -56573645 + LTR33 LTR ERVL 9 158 -363 194 291 18 0 chr10 89016021 89016076 -56573212 + MIR SINE MIR 101 156 -106 3903 156 16 4 chr10 89016343 89017040 -56572248 - L1MA6 LINE L1 -184 6116 5412 837 164 79 0 chr10 89017045 89017222 -56572066 + L1MA6 LINE L1 6106 6296 -4 212 296 111 93 chr10 89017859 89017998 -56571290 + MIR3 SINE MIR 27 171 -37 3117 27 0 5 chr10 89017998 89018369 -56570919 - L1PA3 LINE L1 -1 6154 5786 212 296 111 93 chr10 89018369 89018391 -56570897 + MIR3 SINE MIR 171 191 -17 324 0 0 0 chr10 89020449 89020485 -56568803 + (TG)n Simple_repeat Simple_repeat 2 37 0 1013 171 11 16 chr10 89021203 89021390 -56567898 - MER5A DNA MER1_type -3 186 1 469 318 182 24 chr10 89022465 89023067 -56566221 - L2 LINE L2 -1 3312 2623 300 220 70 30 chr10 89023730 89023830 -56565458 + MIR SINE MIR 49 152 -110 287 328 59 0 chr10 89024139 89024258 -56565030 + L2 LINE L2 3188 3313 0 * 584 354 57 22 chr10 89024240 89024556 -56564732 - L2 LINE L2 -1 3312 2986 1361 298 144 34 chr10 89024698 89025432 -56563856 - L2 LINE L2 -513 2801 1987 474 209 11 11 chr10 89025571 89025662 -56563626 + MER50 LTR ERV1 621 711 -23 513 115 0 0 chr10 89026741 89026828 -56562460 + (TA)n Simple_repeat Simple_repeat 1 87 0 22 0 0 0 chr10 89027302 89027324 -56561964 + AT_rich Low_complexity Low_complexity 1 22 0 297 243 108 61 chr10 89028206 89028420 -56560868 - L1ME LINE L1 -4922 640 417 353 319 80 111 chr10 89028712 89029138 -56560150 - L1ME LINE L1 -5618 452 42 2013 128 27 0 chr10 89029215 89029513 -56559775 + AluSg SINE Alu 1 306 -4 321 125 16 16 chr10 89030822 89030886 -56558402 - L1MC1 LINE L1 0 6333 6270 7088 106 10 21 chr10 89030886 89031969 -56557319 - MER11C LTR ERVK 0 1071 1 5001 46 5 26 chr10 89031969 89032616 -56556672 - HERVK11 LTR ERVK 0 7953 7321 1010 92 0 20 chr10 89032599 89032752 -56556536 + HERVK11 LTR ERVK 3323 3472 -4481 * 3588 254 21 24 chr10 89032753 89033531 -56555757 - L1MC1 LINE L1 -72 6261 5487 2558 196 33 2 chr10 89033557 89034073 -56555215 - L1MC/D LINE L1 -563 5796 5265 22 70 0 0 chr10 89035320 89035363 -56553925 + AT_rich Low_complexity Low_complexity 1 43 0 452 272 60 60 chr10 89035392 89035660 -56553628 - L1ME3A LINE L1 -12 6158 5891 * 1955 246 26 29 chr10 89035657 89036238 -56553050 + L1MD2 LINE L1 5778 6356 -3 1252 272 42 18 chr10 89036657 89037173 -56552115 + L1MC4 LINE L1 6458 7059 -834 * 1301 268 70 31 chr10 89037167 89037299 -56551989 + L1MC4 LINE L1 7338 7463 -579 2189 141 8 27 chr10 89037299 89037668 -56551620 - THE1B LTR MaLR -2 362 1 1301 268 70 31 chr10 89037668 89038076 -56551212 + L1MC4 LINE L1 7463 7899 -143 1157 102 6 6 chr10 89038311 89038478 -56550810 - AluY SINE Alu -144 167 1 225 232 49 0 chr10 89038479 89038561 -56550727 - L1MEc LINE L1 -4072 2535 2450 907 162 94 4 chr10 89038601 89038836 -56550452 - L1MEc LINE L1 -4012 2414 2159 1997 229 71 27 chr10 89038952 89040213 -56549075 - L1M4 LINE L1 -3118 3526 2201 248 257 112 92 chr10 89041823 89042259 -56547029 + HAL1 LINE L1 1483 1927 -580 250 244 103 0 chr10 89042261 89042339 -56546949 - L2 LINE L2 -8 3305 3220 861 276 66 70 chr10 89042389 89042846 -56546442 - MER21B LTR ERV1 -124 807 329 493 366 14 11 chr10 89042991 89043275 -56546013 + LTR16A LTR ERVL 18 302 -148 3719 150 68 102 chr10 89043277 89044148 -56545140 - Tigger3b DNA MER2_type -1 1231 391 303 302 79 15 chr10 89044370 89044502 -56544786 - LTR16A LTR ERVL 0 457 306 2212 163 31 3 chr10 89044507 89044893 -56544395 + Tigger3b DNA MER2_type 2 398 -833 1336 187 37 17 chr10 89044895 89045074 -56544214 - L1M4 LINE L1 -5086 1456 1282 1790 173 51 15 chr10 89045074 89045410 -56543878 - MER7A DNA MER2_type 0 346 1 1336 187 37 17 chr10 89045410 89045578 -56543710 - L1M4 LINE L1 -5260 1282 1102 1002 297 21 26 chr10 89045571 89045948 -56543340 - L1M4 LINE L1 -5826 716 342 * 1382 92 5 0 chr10 89046102 89046298 -56542990 - L1P LINE L1 -5937 209 13 438 314 33 54 chr10 89046291 89046536 -56542752 - L1M4 LINE L1 -1148 4998 4749 * 2155 114 0 3 chr10 89046536 89046835 -56542453 - AluSg SINE Alu -12 298 1 438 314 33 54 chr10 89046835 89047108 -56542180 - L1M4 LINE L1 -1397 4749 4491 907 185 0 0 chr10 89047184 89047357 -56541931 - L1M4 LINE L1 -2145 4001 3829 6447 122 18 24 chr10 89047440 89048604 -56540684 - L1MA2 LINE L1 0 6304 5146 2356 162 45 12 chr10 89048604 89049024 -56540264 + MER61C LTR ERV1 1 434 0 6447 122 18 24 chr10 89049024 89049063 -56540225 - L1MA2 LINE L1 -1158 5146 5108 848 116 27 27 chr10 89049058 89049205 -56540083 - L1MA2 LINE L1 -398 5906 5760 * 7853 242 10 72 chr10 89049204 89052253 -56537035 - L1M4 LINE L1 -1053 6512 3697 1868 133 7 4 chr10 89052253 89052554 -56536734 - AluSx SINE Alu 0 308 7 7853 242 10 72 chr10 89052554 89052868 -56536420 - L1M4 LINE L1 -3868 3697 3365 12650 197 43 16 chr10 89052869 89053756 -56535532 - L1M4 LINE L1 -4899 2666 1804 2232 111 3 0 chr10 89053756 89054054 -56535234 - AluSp SINE Alu -13 300 2 12650 197 43 16 chr10 89054054 89055751 -56533537 - L1M4 LINE L1 -5761 1804 13 1873 230 41 19 chr10 89055769 89056283 -56533005 - L1MB7 LINE L1 -10 6985 6461 1434 235 26 53 chr10 89056279 89056465 -56532823 - L1MB7 LINE L1 -771 6186 5997 * 711 239 0 0 chr10 89056465 89056628 -56532660 - FRAM SINE Alu 0 166 4 1434 235 26 53 chr10 89056628 89056931 -56532357 - L1MB7 LINE L1 -960 5997 5710 29 47 0 0 chr10 89056986 89057029 -56532259 + AT_rich Low_complexity Low_complexity 1 43 0 4593 247 26 47 chr10 89057066 89058172 -56531116 - L1MB7 LINE L1 -2168 4789 3734 2094 132 0 3 chr10 89058172 89058482 -56530806 - AluSg SINE Alu -1 309 1 4593 247 26 47 chr10 89058482 89059155 -56530133 - L1MB7 LINE L1 -3223 3734 3048 1216 273 58 83 chr10 89059199 89060710 -56528578 - L1MB7 LINE L1 -3888 3071 1598 * 4315 174 29 64 chr10 89060706 89061306 -56527982 - L1MA7 LINE L1 0 6291 5743 279 0 0 0 chr10 89061306 89061337 -56527951 + (TG)n Simple_repeat Simple_repeat 2 32 0 4315 174 29 64 chr10 89061337 89061800 -56527488 - L1MA7 LINE L1 -548 5743 5265 824 198 5 21 chr10 89061782 89061974 -56527314 - L1MB7 LINE L1 -5231 1628 1440 * 2971 290 77 34 chr10 89061982 89063221 -56526067 - L1MB7 LINE L1 -5461 1398 107 4061 197 39 3 chr10 89063225 89063971 -56525317 + LTR39 LTR ERV1 1 773 -10 1473 179 4 21 chr10 89064088 89064111 -56525177 - AluJb SINE Alu -12 300 278 6075 62 5 3 chr10 89064111 89064889 -56524399 + LTR17 LTR ERV1 1 780 0 1473 179 4 21 chr10 89064889 89065144 -56524144 - AluJb SINE Alu -34 278 27 268 291 74 27 chr10 89065282 89065430 -56523858 - L1MEc LINE L1 -1988 4227 4073 210 191 0 0 chr10 89065498 89065545 -56523743 + (ATG)n Simple_repeat Simple_repeat 2 48 0 1599 246 67 13 chr10 89065560 89066272 -56523016 - L1MEc LINE L1 -3329 2886 2170 672 334 78 50 chr10 89066288 89066617 -56522671 + L2 LINE L2 2508 2826 -487 1828 180 49 0 chr10 89066617 89066945 -56522343 + MER2 DNA MER2_type 1 344 0 672 334 78 50 chr10 89066945 89067390 -56521898 + L2 LINE L2 2826 3310 -3 357 348 58 13 chr10 89068224 89068379 -56520909 + MIR SINE MIR 2 163 -99 5951 150 55 37 chr10 89068379 89069589 -56519699 - Tigger3b DNA MER2_type 0 1231 1 233 312 43 0 chr10 89069641 89069734 -56519554 - MIR SINE MIR -6 256 160 246 196 39 0 chr10 89069928 89069979 -56519309 - MER20 DNA MER1_type -1 218 166 540 165 91 16 chr10 89069989 89070110 -56519178 + L1MB7 LINE L1 5998 6127 -57 942 75 15 0 chr10 89070121 89070254 -56519034 - L1PA5 LINE L1 -5 6149 6015 423 299 34 14 chr10 89070254 89070390 -56518898 - MER20 DNA MER1_type -53 166 25 191 61 30 0 chr10 89070590 89070623 -56518665 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 12815 201 29 9 chr10 89071018 89074765 -56514523 - L1PA13 LINE L1 -11 6152 2359 243 0 0 0 chr10 89075708 89075735 -56513553 + (TG)n Simple_repeat Simple_repeat 2 28 0 2159 86 0 4 chr10 89075739 89076019 -56513269 - AluY SINE Alu -32 279 1 498 242 164 15 chr10 89076085 89076354 -56512934 - MER5C DNA MER1_type -1 323 15 557 243 165 17 chr10 89076567 89076925 -56512363 + L1M4 LINE L1 3279 3689 -2457 618 268 21 30 chr10 89076957 89077192 -56512096 + L1M4 LINE L1 3796 4028 -2118 3839 178 161 15 chr10 89077192 89078606 -56510682 + MER52A LTR ERV1 1 1755 0 890 293 57 0 chr10 89078606 89078906 -56510382 + L1M4 LINE L1 4025 4341 -1805 3178 124 42 11 chr10 89078906 89079460 -56509828 + L1MA3 LINE L1 5735 6305 0 462 248 81 29 chr10 89079466 89079676 -56509612 + L1ME1 LINE L1 5891 6111 -55 369 75 0 0 chr10 89080714 89080767 -56508521 + (CA)n Simple_repeat Simple_repeat 2 54 0 2771 264 100 21 chr10 89080902 89082252 -56507036 + L1MD2 LINE L1 3237 4693 -1453 3562 241 65 21 chr10 89082291 89083560 -56505728 + L1MD2 LINE L1 5015 6343 -16 229 194 28 14 chr10 89084033 89084105 -56505183 + L1MD2 LINE L1 6285 6357 -2 183 313 19 100 chr10 89084321 89084368 -56504920 + MIR SINE MIR 106 155 -107 2170 44 44 11 chr10 89084368 89084669 -56504619 + AluY SINE Alu 2 311 0 183 313 19 100 chr10 89084669 89084780 -56504508 + MIR SINE MIR 155 252 -10 982 144 11 29 chr10 89084854 89085028 -56504260 - MER58B DNA MER1_type -6 335 165 263 293 41 41 chr10 89085187 89085310 -56503978 - L2 LINE L2 -459 2855 2733 640 309 93 51 chr10 89085444 89085797 -56503491 - L2 LINE L2 -363 2951 2584 306 87 0 0 chr10 89086082 89086128 -56503160 + (TC)n Simple_repeat Simple_repeat 2 47 0 204 208 28 14 chr10 89086127 89086199 -56503089 + (CATATA)n Simple_repeat Simple_repeat 3 75 0 * 22 0 0 0 chr10 89086284 89086306 -56502982 + AT_rich Low_complexity Low_complexity 1 22 0 430 244 28 89 chr10 89086800 89086980 -56502308 + MER92C LTR ERV1 1 169 -385 271 80 160 0 chr10 89087072 89087122 -56502166 + MER92C LTR ERV1 497 554 0 236 278 0 11 chr10 89087992 89088082 -56501206 + L1ME LINE L1 5705 5793 -371 230 243 14 29 chr10 89089154 89089224 -56500064 + (CATA)n Simple_repeat Simple_repeat 2 70 0 225 269 15 0 chr10 89090818 89090885 -56498403 + L1M4 LINE L1 2133 2200 -3946 * 240 186 34 0 chr10 89090872 89090931 -56498357 - L1MC4 LINE L1 -1323 6719 6659 1053 150 0 0 chr10 89090937 89091117 -56498171 + (TA)n Simple_repeat Simple_repeat 1 180 0 222 118 0 0 chr10 89091119 89091153 -56498135 + (CATATA)n Simple_repeat Simple_repeat 3 36 0 555 256 123 10 chr10 89091215 89091311 -56497977 + L1M4 LINE L1 2233 2317 -3829 2615 128 34 0 chr10 89091311 89091725 -56497563 - MSTA LTR MaLR 0 428 1 13973 142 17 29 chr10 89091732 89094178 -56495110 + Tigger1 DNA MER2_type 2 2417 -1 555 256 123 10 chr10 89094178 89094456 -56494832 + L1M4 LINE L1 2322 2658 -3488 752 250 29 0 chr10 89094459 89094631 -56494657 + MER45A DNA AcHobo 2 178 0 1465 60 0 0 chr10 89094661 89094845 -56494443 - L1PB1 LINE L1 -2 6149 5966 257 231 0 0 chr10 89094845 89094897 -56494391 + LTR30 LTR ERV1 1 52 -670 463 70 4 0 chr10 89094897 89094981 -56494307 + LTR12 LTR ERV1 53 251 -463 394 266 16 0 chr10 89094981 89095105 -56494183 + LTR30 LTR ERV1 517 642 -80 275 227 0 40 chr10 89095085 89095160 -56494128 + LTR30 LTR ERV1 553 624 -98 * 759 160 25 0 chr10 89095160 89095279 -56494009 + LTR12 LTR ERV1 359 480 -234 4814 147 17 28 chr10 89095280 89095936 -56493352 - L1PB1 LINE L1 -182 5969 5307 1833 166 3 0 chr10 89095936 89096226 -56493062 - AluSx SINE Alu -21 291 1 4814 147 17 28 chr10 89096226 89096970 -56492318 - L1PB1 LINE L1 -844 5307 4571 233 311 68 14 chr10 89097092 89097166 -56492122 - MER5A DNA MER1_type -57 132 55 2385 156 25 0 chr10 89098254 89098697 -56490591 + L1MA6 LINE L1 5847 6300 0 186 274 16 48 chr10 89098710 89098772 -56490516 - MER5A DNA MER1_type -48 141 82 191 343 166 18 chr10 89099149 89099426 -56489862 - L2 LINE L2 -5 3308 2991 230 409 43 0 chr10 89101795 89101888 -56487400 + L2 LINE L2 3151 3247 -25 183 419 0 0 chr10 89102130 89102223 -56487065 - L2 LINE L2 -13 3300 3208 751 209 181 61 chr10 89102267 89102659 -56486629 - LTR8A LTR ERV1 0 727 289 339 232 113 65 chr10 89102833 89102988 -56486300 - MER87 LTR ERV1 -387 154 1 854 278 60 17 chr10 89102997 89103299 -56485989 - HUERS-P1 LTR ERV1 -2 6261 5947 301 313 23 16 chr10 89103383 89103511 -56485777 - MER57-int LTR ERV1 -502 4452 4324 * 323 333 50 13 chr10 89103404 89103563 -56485725 - MER70-int LTR ERVL -321 4702 4538 7448 171 83 34 chr10 89103868 89105481 -56483807 - MER57-int LTR ERV1 -57 6274 4568 1428 156 100 52 chr10 89105481 89105770 -56483518 + AluSx SINE Alu 1 303 -9 7448 171 83 34 chr10 89105770 89105901 -56483387 - MER57-int LTR ERV1 -1763 4568 4445 1679 190 90 58 chr10 89105879 89106348 -56482940 - MER57-int LTR ERV1 -3349 4771 4288 * 2701 171 16 54 chr10 89106337 89106963 -56482325 - MER57-int LTR ERV1 -2624 3322 2721 3199 130 99 129 chr10 89106990 89108358 -56480930 + pTR5 LTR ERV1 5 691 -23 695 219 62 0 chr10 89108367 89108527 -56480761 - MER57-int LTR ERV1 -4577 2960 2791 3285 126 33 41 chr10 89108549 89109129 -56480159 - LTR39 LTR ERV1 -208 575 1 272 227 31 94 chr10 89109734 89109862 -56479426 - MER21B LTR ERV1 -170 693 574 3972 116 140 114 chr10 89109965 89111310 -56477978 + pTR5 LTR ERV1 743 2438 0 2170 102 20 0 chr10 89111478 89111771 -56477517 + AluSp SINE Alu 1 299 -14 300 233 22 44 chr10 89111880 89111970 -56477318 + MLT1J2 LTR MaLR 357 444 -6 29 60 0 0 chr10 89111976 89112026 -56477262 + AT_rich Low_complexity Low_complexity 1 50 0 339 261 39 34 chr10 89112026 89112251 -56477037 - L1 LINE L1 -2158 3988 3757 204 332 233 21 chr10 89112275 89112602 -56476686 + L2 LINE L2 2645 3036 -277 282 303 141 35 chr10 89112767 89112965 -56476323 - LTR16A LTR ERVL -9 441 223 198 0 0 0 chr10 89113081 89113103 -56476185 + (T)n Simple_repeat Simple_repeat 1 22 0 347 358 37 0 chr10 89113116 89113278 -56476010 - LTR16A1 LTR ERVL -289 168 1 350 308 109 45 chr10 89113509 89113756 -56475532 + L2 LINE L2 3028 3290 -23 1641 186 22 0 chr10 89113806 89114117 -56475171 - L1MC1 LINE L1 -11 6322 6005 2070 153 5 16 chr10 89114189 89114468 -56474820 - L1MC1 LINE L1 -438 5895 5620 2474 144 62 7 chr10 89114468 89114508 -56474780 + LOR1b LTR ERV1 1 37 -424 2252 112 0 13 chr10 89114508 89114820 -56474468 - AluY SINE Alu -3 308 1 2474 144 62 7 chr10 89114820 89115216 -56474072 + LOR1b LTR ERV1 37 461 0 2070 153 5 16 chr10 89115216 89115314 -56473974 - L1MC1 LINE L1 -713 5620 5522 774 281 77 65 chr10 89115633 89116217 -56473071 - L1 LINE L1 -2873 3273 2683 556 308 70 23 chr10 89116767 89117163 -56472125 - L1ME LINE L1 -437 5684 5269 27 73 0 0 chr10 89117633 89117688 -56471600 + AT_rich Low_complexity Low_complexity 1 55 0 23 0 0 0 chr10 89117719 89117742 -56471546 + AT_rich Low_complexity Low_complexity 1 23 0 182 286 20 0 chr10 89117819 89117868 -56471420 - MER5B DNA MER1_type -49 129 80 325 330 32 60 chr10 89119130 89119315 -56469973 - MIR3 SINE MIR -13 195 16 23 68 0 0 chr10 89121234 89121278 -56468010 + AT_rich Low_complexity Low_complexity 1 44 0 22 80 0 0 chr10 89121929 89121979 -56467309 + AT_rich Low_complexity Low_complexity 1 50 0 23 0 0 0 chr10 89122408 89122431 -56466857 + AT_rich Low_complexity Low_complexity 1 23 0 2112 84 0 10 chr10 89122841 89123139 -56466149 - L1PB1 LINE L1 -492 5659 5365 3231 107 8 4 chr10 89123141 89123620 -56465668 + L1PB1 LINE L1 5671 6151 0 1087 280 50 35 chr10 89123879 89124339 -56464949 + L1MCc LINE L1 19 485 -5938 1496 190 37 17 chr10 89124450 89124803 -56464485 + MLT1A1 LTR MaLR 4 363 -2 717 256 109 71 chr10 89125044 89125416 -56463872 + L1MCc LINE L1 979 1335 -5573 2467 50 0 7 chr10 89125416 89125713 -56463575 + AluY SINE Alu 1 295 -16 717 256 109 71 chr10 89125713 89126343 -56462945 + L1MCc LINE L1 1335 2017 -4891 207 229 0 21 chr10 89126948 89126996 -56462292 + L2 LINE L2 3265 3311 -2 202 361 31 10 chr10 89128267 89128364 -56460924 - MIR SINE MIR -76 132 34 3243 178 33 13 chr10 89128416 89129023 -56460265 + LTR31 LTR ERV1 1 619 0 1201 178 21 66 chr10 89129674 89129960 -56459328 + LTR57-int LTR ERVL 310 582 -4761 780 179 96 79 chr10 89129696 89130102 -56459186 + HERVS71 LTR ERV1 1521 1951 -2334 * 559 162 46 70 chr10 89130089 89130295 -56458993 + HERVS71 LTR ERV1 1390 1552 -234 * 309 179 15 0 chr10 89130285 89130352 -56458936 + HERVS71 LTR ERV1 3201 3268 -3063 * 905 343 47 42 chr10 89132272 89133003 -56456285 + HERVS71 LTR ERV1 2571 3304 -3818 277 376 8 8 chr10 89133006 89133139 -56456149 + HERVS71 LTR ERV1 4889 5021 -3957 620 324 40 60 chr10 89133351 89134193 -56455095 + HERVS71 LTR ERV1 5341 7604 -516 2245 117 0 0 chr10 89135885 89136184 -56453104 + AluSc SINE Alu 1 299 -10 3124 192 31 7 chr10 89136249 89136853 -56452435 + LTR31 LTR ERV1 1 619 0 443 290 28 97 chr10 89137309 89137599 -56451689 - L2 LINE L2 -550 2764 2495 403 286 77 12 chr10 89137672 89137840 -56451448 + MIR SINE MIR 34 212 -50 358 333 83 11 chr10 89137863 89138043 -56451245 - MIR SINE MIR 0 262 70 282 253 13 0 chr10 89138336 89138411 -56450877 + (TA)n Simple_repeat Simple_repeat 2 77 0 2537 68 0 0 chr10 89138860 89139170 -56450118 + AluY SINE Alu 2 311 0 364 327 9 0 chr10 89139678 89139788 -56449500 + (TG)n Simple_repeat Simple_repeat 2 112 0 714 268 162 46 chr10 89140321 89140649 -56448639 + MLT1E LTR MaLR 1 366 -227 5027 176 30 53 chr10 89140650 89142461 -56446827 - L1 LINE L1 -2671 4894 3089 1360 264 31 14 chr10 89142462 89142978 -56446310 - L1M4 LINE L1 -3444 2702 2178 553 321 31 37 chr10 89142982 89143490 -56445798 + L1ME3A LINE L1 4523 5027 -1119 * 1135 196 25 0 chr10 89143489 89143729 -56445559 - L1PB1 LINE L1 -3740 2406 2161 1016 207 22 5 chr10 89143729 89143951 -56445337 + L1PB1 LINE L1 2423 2648 -3498 * 5297 168 10 44 chr10 89143932 89146040 -56443248 + L1PB1 LINE L1 4157 6192 0 687 299 113 18 chr10 89146051 89146746 -56442542 + L1ME3A LINE L1 5043 5811 -351 2059 120 0 0 chr10 89146749 89147058 -56442230 - AluSq SINE Alu 0 309 1 321 344 10 0 chr10 89147121 89147217 -56442071 - MER5A DNA MER1_type -83 106 10 870 276 53 16 chr10 89147219 89147538 -56441750 + L1ME3A LINE L1 5791 6121 -49 383 98 16 0 chr10 89147547 89147608 -56441680 + (TA)n Simple_repeat Simple_repeat 1 62 0 4022 207 23 48 chr10 89147896 89148806 -56440482 + L1MB5 LINE L1 4383 5217 -957 237 33 0 0 chr10 89148806 89148836 -56440452 + (TG)n Simple_repeat Simple_repeat 1 30 0 4022 207 23 48 chr10 89148836 89149771 -56439517 + L1MB5 LINE L1 5217 6174 0 237 290 30 76 chr10 89150441 89150572 -56438716 - MIR SINE MIR -96 166 42 1033 256 46 52 chr10 89151806 89152130 -56437158 - MLT1H LTR MaLR -222 327 6 25664 140 11 14 chr10 89152170 89158583 -56430705 + L1PA8A LINE L1 4 6445 -1 1677 198 10 0 chr10 89159209 89159517 -56429771 + AluJo SINE Alu 1 311 -1 814 180 0 16 chr10 89159529 89159645 -56429643 + GA-rich Low_complexity Low_complexity 1 114 -66 2398 72 0 0 chr10 89159645 89159936 -56429352 + AluSc SINE Alu 1 291 -18 814 180 0 16 chr10 89159936 89160002 -56429286 + GA-rich Low_complexity Low_complexity 114 180 0 22 56 0 0 chr10 89160154 89160190 -56429098 + AT_rich Low_complexity Low_complexity 1 36 0 369 346 45 40 chr10 89160275 89160477 -56428811 - L2 LINE L2 -2793 521 319 241 361 69 28 chr10 89160685 89160829 -56428459 - MIR SINE MIR -108 154 5 25 0 0 0 chr10 89161409 89161434 -56427854 + AT_rich Low_complexity Low_complexity 1 25 0 230 167 74 0 chr10 89161434 89161488 -56427800 - L1ME LINE L1 -279 5887 5830 22 35 0 0 chr10 89161488 89161517 -56427771 + AT_rich Low_complexity Low_complexity 1 29 0 7637 99 11 1 chr10 89161525 89163408 -56425880 - L1PA7 LINE L1 -15 6139 4236 3741 88 9 2 chr10 89163408 89163940 -56425348 - L1P LINE L1 -1682 4464 3929 269 272 0 86 chr10 89164325 89164406 -56424882 + L2 LINE L2 3238 3311 -2 2351 35 0 0 chr10 89164712 89164994 -56424294 - L1PA2 LINE L1 0 6155 5874 2819 25 0 0 chr10 89164994 89165319 -56423969 + L1PA2 LINE L1 5550 5874 -281 496 347 57 17 chr10 89165768 89166068 -56423220 + L2 LINE L2 3002 3313 0 839 301 58 84 chr10 89166644 89167261 -56422027 + L1ME3A LINE L1 615 1215 -4904 25 31 0 0 chr10 89167447 89167479 -56421809 + AT_rich Low_complexity Low_complexity 1 32 0 1673 103 40 4 chr10 89167600 89167853 -56421435 - L1PA11 LINE L1 -6 6168 5907 1163 137 186 0 chr10 89168150 89168442 -56420846 + L1MA4A LINE L1 5220 5559 -744 459 198 241 0 chr10 89168938 89169054 -56420234 + MER61D LTR ERV1 340 483 -18 2872 168 117 18 chr10 89169070 89169729 -56419559 + L1MA4A LINE L1 5556 6279 -24 244 319 109 17 chr10 89169732 89170440 -56418848 + L1ME3A LINE L1 2458 3230 -2899 420 262 47 39 chr10 89170497 89170753 -56418535 - L1M4 LINE L1 -2207 3939 3682 351 299 87 32 chr10 89170821 89171225 -56418063 + L1ME3A LINE L1 4925 5350 -779 * 373 233 99 76 chr10 89171210 89171472 -56417816 + L1ME3A LINE L1 5673 5940 -213 246 378 42 7 chr10 89171668 89171811 -56417477 + L2 LINE L2 3128 3275 -38 273 359 24 59 chr10 89171965 89172255 -56417033 + HAL1 LINE L1 237 516 -1991 * 6269 220 37 1 chr10 89172238 89173733 -56415555 + L1PA15 LINE L1 3063 4610 -1536 6092 217 87 18 chr10 89173733 89175227 -56414061 - MER52A LTR ERV1 0 1755 46 5478 122 26 11 chr10 89176077 89177602 -56411686 + L1PA15 LINE L1 4624 6161 -4 264 225 101 54 chr10 89177636 89177765 -56411523 + HAL1 LINE L1 793 927 -1580 253 296 32 8 chr10 89177869 89177994 -56411294 + HAL1 LINE L1 2264 2391 -116 295 198 0 23 chr10 89178098 89178184 -56411104 + (TA)n Simple_repeat Simple_repeat 2 85 0 1199 278 52 21 chr10 89178667 89179052 -56410236 + LTR16A LTR ERVL 51 447 -3 282 308 43 34 chr10 89179853 89180061 -56409227 - MLT1J LTR MaLR -8 503 294 206 0 69 0 chr10 89180452 89180481 -56408807 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1856 146 7 0 chr10 89180483 89180764 -56408524 - AluSx SINE Alu -29 283 1 1296 270 33 14 chr10 89181055 89181485 -56407803 - L1MB8 LINE L1 0 6178 5741 2686 97 11 3 chr10 89181485 89181857 -56407431 + THE1C LTR MaLR 1 375 0 1088 118 20 7 chr10 89181857 89182060 -56407228 + THE1C-int LTR MaLR 1 209 -1424 320 149 26 97 chr10 89182037 89182151 -56407137 + L1M4 LINE L1 5124 5229 -917 * 229 250 0 0 chr10 89182718 89182770 -56406518 + LTR30 LTR ERV1 1 52 -670 1304 156 33 74 chr10 89182770 89183101 -56406187 + LTR12 LTR ERV1 55 285 -429 300 234 64 0 chr10 89183102 89183196 -56406092 + LTR30 LTR ERV1 553 652 -70 714 102 0 0 chr10 89183196 89183294 -56405994 + LTR12 LTR ERV1 617 714 0 407 330 89 40 chr10 89183783 89184132 -56405156 + L1MC4a LINE L1 5596 5964 -157 2654 26 0 0 chr10 89184189 89184495 -56404793 + AluYa5 SINE Alu 1 306 -5 241 229 0 0 chr10 89184571 89184619 -56404669 + HAL1b LINE L1 410 457 -891 494 83 0 0 chr10 89184865 89184937 -56404351 + Alu SINE Alu 227 298 -11 24 67 0 0 chr10 89185303 89185348 -56403940 + AT_rich Low_complexity Low_complexity 1 45 0 27 0 0 0 chr10 89185463 89185490 -56403798 + AT_rich Low_complexity Low_complexity 1 27 0 312 256 116 0 chr10 89186132 89186261 -56403027 + L1ME LINE L1 5694 5837 -333 26 50 0 0 chr10 89186435 89186475 -56402813 + AT_rich Low_complexity Low_complexity 1 40 0 396 320 95 37 chr10 89186524 89186987 -56402301 - L1M4 LINE L1 -2912 3234 2745 5287 141 16 2 chr10 89187775 89188925 -56400363 + L1PA16 LINE L1 4995 6157 -9 364 315 89 25 chr10 89189135 89189338 -56399950 + MIR SINE MIR 41 256 -6 1956 150 41 15 chr10 89189674 89190013 -56399275 + MER7A DNA MER2_type 1 346 0 22 0 0 0 chr10 89190843 89190865 -56398423 + AT_rich Low_complexity Low_complexity 1 22 0 327 25 0 0 chr10 89191963 89192003 -56397285 + (TG)n Simple_repeat Simple_repeat 2 41 0 407 288 109 22 chr10 89192014 89192198 -56397090 - HAL1 LINE L1 -1262 1245 1046 270 254 183 8 chr10 89192379 89192505 -56396783 - HAL1 LINE L1 -1570 937 790 272 315 49 56 chr10 89192677 89192820 -56396468 - HAL1 LINE L1 -1789 718 577 362 280 74 46 chr10 89192895 89193070 -56396218 - HAL1 LINE L1 -2132 375 196 565 217 11 69 chr10 89193092 89193281 -56396007 - MER104 DNA MER2_type -2 178 1 647 290 41 44 chr10 89193316 89193963 -56395325 - MER21B LTR ERV1 -149 714 25 530 231 16 55 chr10 89193970 89194152 -56395136 - HAL1 LINE L1 -2320 187 13 4599 194 3 8 chr10 89194164 89195160 -56394128 + L1PA15-16 LINE L1 1996 2989 -3860 950 208 10 0 chr10 89195168 89195370 -56393918 + L1PBa LINE L1 1 204 -6659 * 4781 149 34 14 chr10 89195361 89196212 -56393076 + L1PBa LINE L1 1113 1980 -4883 * 6110 212 31 6 chr10 89196193 89197819 -56391469 + L1PBa LINE L1 2656 4381 -2481 835 177 6 17 chr10 89197823 89198004 -56391284 + L1 LINE L1 2979 3157 -3692 261 259 37 0 chr10 89198013 89198094 -56391194 - L1P LINE L1 -2912 3234 3151 270 118 0 92 chr10 89198098 89198293 -56390995 + (TA)n Simple_repeat Simple_repeat 2 178 0 235 125 0 88 chr10 89198304 89198496 -56390792 + (TA)n Simple_repeat Simple_repeat 2 176 0 2630 220 0 18 chr10 89198539 89199139 -56390149 + L1 LINE L1 3179 3767 -3082 2242 254 43 4 chr10 89199139 89199817 -56389471 + L1 LINE L1 2772 3475 -2671 1119 118 15 26 chr10 89199922 89200117 -56389171 + L1PB1 LINE L1 5958 6150 -1 34 24 0 0 chr10 89200117 89200158 -56389130 + AT_rich Low_complexity Low_complexity 1 41 0 16186 164 18 1 chr10 89200165 89204027 -56385261 + L1PA12 LINE L1 2276 6168 0 2233 102 0 0 chr10 89204858 89205162 -56384126 - AluY SINE Alu -7 304 1 481 314 11 0 chr10 89205219 89205394 -56383894 + (CA)n Simple_repeat Simple_repeat 2 178 0 385 338 38 28 chr10 89205954 89206167 -56383121 - L2 LINE L2 0 3313 3099 2217 81 0 3 chr10 89206610 89206895 -56382393 + AluSc SINE Alu 1 284 -25 865 360 96 12 chr10 89207124 89207729 -56381559 - L2 LINE L2 -790 2524 1869 1272 157 9 5 chr10 89207908 89208124 -56381164 - Tigger1 DNA MER2_type 0 2418 2202 785 173 0 87 chr10 89208112 89208285 -56381003 - Tigger1 DNA MER2_type -2260 158 1 * 1116 190 33 0 chr10 89208617 89208828 -56380460 - MER20 DNA MER1_type -1 218 1 227 258 34 34 chr10 89208890 89208979 -56380309 - L1M2 LINE L1 -4279 2570 2482 326 316 32 29 chr10 89209882 89210195 -56379093 - L1MEc LINE L1 -4840 1556 1243 2258 39 3 14 chr10 89210221 89210545 -56378743 - AluY SINE Alu 0 321 1 322 301 123 33 chr10 89210712 89210988 -56378300 - L1MEc LINE L1 -5258 947 647 241 348 63 19 chr10 89211714 89211872 -56377416 + MIR SINE MIR 92 256 -6 267 294 235 0 chr10 89212643 89212779 -56376509 + MLT1H LTR MaLR 382 549 0 240 284 11 63 chr10 89213411 89213506 -56375782 + L2 LINE L2 2321 2410 -904 1843 74 0 12 chr10 89214053 89214335 -56374953 + AluY SINE Alu 42 320 0 1848 115 72 4 chr10 89215032 89215310 -56373978 + AluSq SINE Alu 1 297 -16 747 147 7 7 chr10 89215646 89215782 -56373506 - FRAM SINE Alu 0 40 1 * 772 185 15 0 chr10 89215782 89215915 -56373373 - AluJb SINE Alu -172 140 6 1505 270 83 22 chr10 89216034 89216756 -56372532 + L1ME1 LINE L1 5405 6332 -2 2014 264 33 66 chr10 89216756 89217574 -56371714 - L1ME1 LINE L1 -46 6120 5331 2704 10 0 0 chr10 89217574 89217873 -56371415 - AluYa5 SINE Alu -12 299 1 2014 264 33 66 chr10 89217873 89217930 -56371358 - L1ME1 LINE L1 -835 5331 5274 12325 236 47 36 chr10 89217947 89220738 -56368550 + L1PB4 LINE L1 12 2769 -4148 2125 79 0 0 chr10 89220738 89221005 -56368283 + AluY SINE Alu 25 291 -20 12325 236 47 36 chr10 89221005 89224237 -56365051 + L1PB4 LINE L1 2769 6174 -743 23 0 0 0 chr10 89224237 89224260 -56365028 + AT_rich Low_complexity Low_complexity 1 23 0 12637 167 35 21 chr10 89224262 89228013 -56361275 - L1MA1 LINE L1 0 6302 2498 3537 178 7 17 chr10 89228058 89228762 -56360526 + L1PB4 LINE L1 6162 6858 0 1225 235 43 115 chr10 89228787 89229383 -56359905 - L1M4 LINE L1 -881 5265 4748 347 156 52 0 chr10 89229383 89229460 -56359828 - L1MA8 LINE L1 -6 6285 6205 1225 235 43 115 chr10 89229460 89229721 -56359567 - L1M4 LINE L1 -1398 4748 4470 1041 244 209 4 chr10 89229798 89230352 -56358936 - L1M4 LINE L1 -2896 3250 2583 1223 223 117 51 chr10 89230489 89230924 -56358364 - L1MCc LINE L1 -5942 481 18 409 318 95 0 chr10 89230940 89231066 -56358222 - MIR SINE MIR -102 160 23 655 262 111 65 chr10 89234068 89234465 -56354823 + MLT1J1 LTR MaLR 27 441 -5 212 262 0 0 chr10 89235062 89235104 -56354184 + (ATG)n Simple_repeat Simple_repeat 2 43 0 359 272 10 10 chr10 89235515 89235618 -56353670 + MIR SINE MIR 116 218 -44 36 62 0 0 chr10 89235651 89235715 -56353573 + AT_rich Low_complexity Low_complexity 1 64 0 182 193 0 105 chr10 89235761 89235818 -56353470 - L2 LINE L2 -1530 1784 1734 244 218 0 0 chr10 89236095 89236150 -56353138 + (CA)n Simple_repeat Simple_repeat 1 55 0 23 54 0 0 chr10 89237141 89237178 -56352110 + AT_rich Low_complexity Low_complexity 1 37 0 229 305 105 0 chr10 89237434 89237529 -56351759 - MIR SINE MIR -59 203 99 198 295 66 16 chr10 89237851 89237912 -56351376 - MIR SINE MIR -107 101 38 276 292 98 1 chr10 89238392 89238498 -56350790 + MIR SINE MIR 40 153 -67 1369 240 3 7 chr10 89238935 89239231 -56350057 - AluJo SINE Alu -17 295 1 2527 64 0 0 chr10 89239970 89240265 -56349023 - AluY SINE Alu -16 295 1 979 171 0 0 chr10 89240820 89240978 -56348310 - FAM SINE Alu -17 158 1 885 330 89 18 chr10 89241191 89241628 -56347660 - MLT1J LTR MaLR -43 468 1 386 358 19 6 chr10 89242948 89243110 -56346178 + L2 LINE L2 643 806 -2508 36247 95 12 9 chr10 89243290 89249420 -56339868 - L1PA6 LINE L1 -7 6147 11 5091 298 70 48 chr10 89250119 89251745 -56337543 + L2 LINE L2 602 2308 -1005 2091 127 7 3 chr10 89251745 89252052 -56337236 + AluSg SINE Alu 1 308 -2 5091 298 70 48 chr10 89252052 89253081 -56336207 + L2 LINE L2 2308 3313 0 297 282 10 82 chr10 89253205 89253411 -56335877 - MLT1K LTR MaLR -3 585 395 32 81 0 0 chr10 89253875 89253949 -56335339 + AT_rich Low_complexity Low_complexity 1 74 0 544 328 58 8 chr10 89254252 89254493 -56334795 - MIR SINE MIR -1 261 9 1666 175 38 10 chr10 89254508 89254799 -56334489 - AluSx SINE Alu -13 299 1 7253 168 42 5 chr10 89254802 89257180 -56332108 - L1MA8 LINE L1 0 7251 4789 277 306 0 0 chr10 89257173 89257245 -56332043 - L1MA8 LINE L1 -3476 3630 3559 * 8186 85 3 10 chr10 89257244 89258378 -56330910 - L1P LINE L1 -4198 1948 823 4853 38 0 0 chr10 89258379 89258958 -56330330 + L1PA4 LINE L1 5571 6149 -6 216 0 0 0 chr10 89258980 89259004 -56330284 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 1797 227 27 4 chr10 89259004 89259552 -56329736 - L1MA8 LINE L1 -3538 3568 3007 6205 236 142 31 chr10 89259564 89261807 -56327481 - L1MA8 LINE L1 -4520 2517 1 246 105 0 0 chr10 89262547 89262585 -56326703 + (TG)n Simple_repeat Simple_repeat 2 39 0 22 0 0 0 chr10 89262825 89262847 -56326441 + AT_rich Low_complexity Low_complexity 1 22 0 837 199 24 34 chr10 89264597 89264803 -56324485 + MER3 DNA MER1_type 5 208 -1 238 186 57 71 chr10 89265141 89265211 -56324077 - L2 LINE L2 0 3313 3245 214 273 79 29 chr10 89265979 89266118 -56323170 - L2 LINE L2 -798 2516 2371 180 0 0 0 chr10 89267666 89267686 -56321602 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 21 0 0 0 chr10 89268245 89268266 -56321022 + AT_rich Low_complexity Low_complexity 1 21 0 325 337 124 5 chr10 89268513 89268706 -56320582 + MIR SINE MIR 44 259 -3 201 347 28 0 chr10 89269014 89269086 -56320202 - MIR3 SINE MIR -54 154 81 1898 139 7 0 chr10 89269132 89269405 -56319883 + AluSx SINE Alu 16 290 -22 235 189 14 27 chr10 89270218 89270292 -56318996 + GA-rich Low_complexity Low_complexity 1 73 0 1099 83 0 0 chr10 89271449 89271582 -56317706 + AluSg1 SINE Alu 1 133 -176 2167 101 0 14 chr10 89271582 89271878 -56317410 + AluSg1 SINE Alu 1 292 -17 455 241 154 37 chr10 89273045 89273207 -56316081 - MER5A DNA MER1_type 0 189 9 1211 222 94 139 chr10 89273656 89274616 -56314672 + MER52A LTR ERV1 527 636 0 2022 107 0 31 chr10 89274764 89275054 -56314234 - AluSg SINE Alu 0 310 30 497 280 78 93 chr10 89275067 89275476 -56313812 - L1ME4a LINE L1 -93 6028 5625 2414 75 0 31 chr10 89275476 89275797 -56313491 + AluY SINE Alu 1 311 0 497 280 78 93 chr10 89275797 89275847 -56313441 - L1ME4a LINE L1 -496 5625 5576 552 310 207 6 chr10 89275951 89276464 -56312824 - L2 LINE L2 -431 2883 2268 2135 121 0 0 chr10 89277138 89277427 -56311861 + AluSg SINE Alu 1 289 -21 2132 144 129 5 chr10 89278091 89278472 -56310816 - MSTA LTR MaLR 0 428 1 24 0 0 0 chr10 89278893 89278917 -56310371 + AT_rich Low_complexity Low_complexity 1 24 0 2126 95 10 14 chr10 89280118 89280413 -56308875 + AluSx SINE Alu 1 294 -18 413 237 51 17 chr10 89280556 89280674 -56308614 + MIR SINE MIR 130 251 -11 743 285 28 44 chr10 89280776 89281025 -56308263 - MIR SINE MIR -6 256 12 1854 103 4 4 chr10 89281362 89281615 -56307673 - MLT2A1 LTR ERVL 0 444 192 282 310 207 7 chr10 89282558 89282703 -56306585 + MIR3 SINE MIR 30 203 -5 184 330 98 52 chr10 89284585 89284640 -56304648 - MIR SINE MIR -25 237 186 4945 86 10 26 chr10 89284640 89285342 -56303946 - LTR8 LTR ERV1 0 691 1 184 330 98 52 chr10 89285342 89285459 -56303829 - MIR SINE MIR -76 186 57 3744 149 18 3 chr10 89285595 89286221 -56303067 - MER41B LTR ERV1 0 635 1 2226 125 0 0 chr10 89287210 89287522 -56301766 + AluSx SINE Alu 1 312 0 355 282 82 46 chr10 89288557 89288752 -56300536 - L1ME LINE L1 -347 5774 5573 1637 163 58 25 chr10 89288786 89289149 -56300139 + THE1C LTR MaLR 1 375 0 29 47 0 0 chr10 89290395 89290438 -56298850 + AT_rich Low_complexity Low_complexity 1 43 0 281 262 11 0 chr10 89290649 89290736 -56298552 + HAL1b LINE L1 714 784 -800 272 301 23 51 chr10 89291207 89291247 -56298041 + L1MC4a LINE L1 6554 6594 -1214 198 71 0 0 chr10 89291247 89291275 -56298013 + (TG)n Simple_repeat Simple_repeat 2 29 0 272 301 23 51 chr10 89291275 89291410 -56297878 + L1MC4a LINE L1 6594 6724 -1084 * 733 228 0 49 chr10 89291408 89291632 -56297656 + L1MC5 LINE L1 7026 7238 -723 320 274 15 22 chr10 89291694 89291829 -56297459 + L1MC5 LINE L1 7394 7527 -434 24 0 0 0 chr10 89292288 89292312 -56296976 + AT_rich Low_complexity Low_complexity 1 24 0 1320 230 211 13 chr10 89292645 89293264 -56296024 - L1ME3A LINE L1 -205 6359 5618 979 263 126 56 chr10 89293289 89294019 -56295269 - L1ME3A LINE L1 -1714 4826 4149 729 263 134 48 chr10 89294019 89294480 -56294808 + MLT1D LTR MaLR 1 501 -4 979 263 126 56 chr10 89294480 89294629 -56294659 - L1ME3A LINE L1 -2391 4149 4012 2020 126 30 0 chr10 89294629 89294931 -56294357 - AluY SINE Alu 0 311 1 979 263 126 56 chr10 89294931 89295073 -56294215 - L1ME3A LINE L1 -2528 4012 3732 1515 156 20 10 chr10 89295083 89295378 -56293910 - L1MD1 LINE L1 -7 6235 5938 1909 195 36 8 chr10 89295379 89295769 -56293519 - L1MD1 LINE L1 -441 5801 5401 982 177 20 0 chr10 89295770 89295968 -56293320 + L1PB1 LINE L1 3591 3792 -2354 6238 164 15 4 chr10 89295976 89297942 -56291346 + L1PB1 LINE L1 4157 6144 -7 369 43 0 0 chr10 89297944 89297991 -56291297 + (TG)n Simple_repeat Simple_repeat 2 48 0 791 17 15 146 chr10 89298004 89298658 -56290630 + (TA)n Simple_repeat Simple_repeat 1 568 0 322 253 58 0 chr10 89298658 89298745 -56290543 + L1MC4 LINE L1 6612 6703 -1339 1511 203 75 3 chr10 89298769 89299128 -56290160 - L1ME3A LINE L1 -4423 2117 1733 938 215 9 33 chr10 89299142 89299356 -56289932 - MLT1D LTR MaLR -296 209 1 338 235 48 65 chr10 89299411 89299641 -56289647 + L1M4 LINE L1 3695 3920 -2226 32 0 0 0 chr10 89299791 89299823 -56289465 + AT_rich Low_complexity Low_complexity 1 32 0 216 0 0 0 chr10 89300109 89300133 -56289155 + (TG)n Simple_repeat Simple_repeat 1 24 0 1468 240 16 25 chr10 89300173 89300539 -56288749 - MLT1A1 LTR MaLR 0 365 3 24200 151 16 21 chr10 89300957 89307366 -56281922 + L1PA8A LINE L1 4 6444 -2 1945 211 44 2 chr10 89307975 89308382 -56280906 + MSTB LTR MaLR 1 424 -2 5617 201 39 4 chr10 89308383 89309501 -56279787 + MSTB-int LTR MaLR 1 1158 -493 887 216 22 11 chr10 89309559 89309740 -56279548 + MLT2B3 LTR ERVL 251 433 -121 264 141 33 33 chr10 89309742 89309834 -56279454 + (TA)n Simple_repeat Simple_repeat 2 93 0 254 32 0 0 chr10 89309870 89309901 -56279387 + MLT2B3 LTR ERVL 414 444 0 1670 180 18 3 chr10 89310235 89310519 -56278769 - AluJo SINE Alu -24 288 1 464 265 92 56 chr10 89310534 89310901 -56278387 - L1ME3A LINE L1 -307 5855 5478 2046 126 0 10 chr10 89310911 89311212 -56278076 - AluSx SINE Alu -14 298 1 25 75 0 0 chr10 89311392 89311445 -56277843 + AT_rich Low_complexity Low_complexity 1 53 0 552 253 152 6 chr10 89311782 89311940 -56277348 + MER5A DNA MER1_type 9 189 0 24 32 0 0 chr10 89313754 89313785 -56275503 + AT_rich Low_complexity Low_complexity 1 31 0 1060 69 7 28 chr10 89313792 89313937 -56275351 + AluSx SINE Alu 1 142 -171 42893 33 21 1 chr10 89313937 89319964 -56269324 + L1PA2 LINE L1 5 6155 0 25 0 0 0 chr10 89319964 89319989 -56269299 + AT_rich Low_complexity Low_complexity 1 25 0 1073 152 5 35 chr10 89319989 89320187 -56269101 + AluSx SINE Alu 120 311 -1 341 358 48 19 chr10 89320421 89320689 -56268599 - L1ME LINE L1 -299 5822 5547 3810 180 33 15 chr10 89321618 89322397 -56266891 + L1MB2 LINE L1 5377 6169 -2 23 0 0 0 chr10 89322524 89322547 -56266741 + AT_rich Low_complexity Low_complexity 1 23 0 1379 85 15 0 chr10 89322850 89323049 -56266239 + L1MA1 LINE L1 6029 6230 -72 409 229 28 56 chr10 89323047 89323261 -56266027 + L1ME1 LINE L1 2759 2966 -3180 * 2492 229 30 29 chr10 89323265 89323407 -56265881 + L1ME1 LINE L1 3365 3505 -2641 2457 74 3 3 chr10 89323407 89323716 -56265572 + AluY SINE Alu 2 310 -1 2492 229 30 29 chr10 89323716 89324311 -56264977 + L1ME1 LINE L1 3505 4103 -2043 * 3187 257 55 4 chr10 89324309 89325340 -56263948 + L1M4 LINE L1 3735 4818 -1328 230 242 22 0 chr10 89325413 89325504 -56263784 + L1M4 LINE L1 4405 4497 -1649 * 449 303 30 0 chr10 89325497 89325731 -56263557 + L1ME1 LINE L1 4128 4368 -1778 356 226 30 23 chr10 89325798 89325931 -56263357 + L1ME1 LINE L1 4589 4722 -1424 573 239 107 11 chr10 89325939 89326211 -56263077 + L1ME1 LINE L1 4902 5199 -947 1871 84 15 4 chr10 89326340 89326613 -56262675 + L1MA1 LINE L1 6027 6302 0 2321 268 40 22 chr10 89326617 89327429 -56261859 + L1ME1 LINE L1 5349 6334 0 22 70 0 0 chr10 89327581 89327624 -56261664 + AT_rich Low_complexity Low_complexity 1 43 0 373 266 65 68 chr10 89327646 89328158 -56261130 + L1MEc LINE L1 1863 2372 -4024 226 238 119 0 chr10 89328174 89328275 -56261013 + L1MEc LINE L1 2373 2485 -3730 1964 154 127 7 chr10 89328745 89329154 -56260134 + LOR1b LTR ERV1 1 458 -3 2166 71 0 0 chr10 89329372 89329654 -56259634 - L1PA12 LINE L1 0 6168 5887 233 291 13 25 chr10 89329670 89329749 -56259539 + L2 LINE L2 2545 2622 -692 693 179 0 8 chr10 89329749 89329866 -56259422 + FLAM_C SINE Alu 1 116 -17 267 103 0 0 chr10 89329869 89329908 -56259380 + (CAAA)n Simple_repeat Simple_repeat 3 41 0 194 0 39 0 chr10 89330510 89330536 -56258752 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 1824 216 40 16 chr10 89331039 89331488 -56257800 + MER31B LTR ERV1 3 462 -4 192 322 23 35 chr10 89331691 89331778 -56257510 + MIR SINE MIR 20 105 -103 186 43 0 0 chr10 89332597 89332620 -56256668 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2872 155 105 72 chr10 89332705 89333409 -56255879 - LTR8A LTR ERV1 0 727 1 370 206 29 0 chr10 89333845 89333947 -56255341 + GA-rich Low_complexity Low_complexity 1 105 0 193 326 111 22 chr10 89334141 89334276 -56255012 - MIR SINE MIR -110 152 6 2597 154 31 22 chr10 89334281 89334771 -56254517 - MER4E LTR ERV1 0 779 103 4894 86 5 5 chr10 89334771 89335438 -56253850 - PABL_B LTR ERV1 0 667 1 2597 154 31 22 chr10 89335438 89335543 -56253745 - MER4E LTR ERV1 -676 103 1 186 321 48 24 chr10 89335773 89335857 -56253431 + MIR SINE MIR 65 150 -112 3690 134 59 78 chr10 89336792 89337585 -56251703 + LTR1 LTR ERV1 8 785 0 459 134 0 24 chr10 89337944 89338026 -56251262 + LTR24B LTR ERV1 4 83 -493 501 270 68 18 chr10 89338210 89338432 -56250856 + LTR24B LTR ERV1 337 569 -7 22 35 0 0 chr10 89338528 89338557 -56250731 + AT_rich Low_complexity Low_complexity 1 29 0 40865 63 7 1 chr10 89339277 89345389 -56243899 + L1PA5 LINE L1 3 6154 0 27 29 0 0 chr10 89345764 89345798 -56243490 + AT_rich Low_complexity Low_complexity 1 34 0 1094 294 74 2 chr10 89345841 89346328 -56242960 - L1M4 LINE L1 -923 5223 4702 204 117 33 33 chr10 89346407 89346467 -56242821 + (TCTA)n Simple_repeat Simple_repeat 1 60 0 277 261 91 18 chr10 89346561 89346726 -56242562 + L1ME3A LINE L1 2176 2352 -3794 584 293 104 32 chr10 89346902 89347341 -56241947 + L1ME3A LINE L1 3525 3931 -2231 1882 127 13 40 chr10 89347341 89347641 -56241647 + AluSx SINE Alu 1 292 -20 584 293 104 32 chr10 89347641 89349377 -56239911 + L1ME3A LINE L1 3931 5866 -296 1957 129 3 7 chr10 89350008 89350318 -56238970 + AluSx SINE Alu 1 309 -3 713 263 73 10 chr10 89350478 89350683 -56238605 - MIR SINE MIR -36 226 9 1027 345 145 22 chr10 89350930 89352084 -56237204 + L2 LINE L2 1080 2375 -939 210 250 0 0 chr10 89352555 89352627 -56236661 + (TA)n Simple_repeat Simple_repeat 2 73 0 362 351 84 0 chr10 89353077 89353302 -56235986 - L1ME LINE L1 -399 5754 5511 311 254 85 63 chr10 89353329 89353660 -56235628 - L1ME LINE L1 -699 5435 5104 915 223 84 0 chr10 89353870 89354072 -56235216 + MER58A DNA MER1_type 1 219 -5 295 320 30 0 chr10 89354135 89354235 -56235053 - L1ME LINE L1 -1311 4818 4716 291 300 31 6 chr10 89354349 89354509 -56234779 - L1ME LINE L1 -1576 4553 4390 * 483 264 82 25 chr10 89354504 89354784 -56234504 - L1ME LINE L1 -5008 1111 816 2330 93 0 3 chr10 89356005 89356305 -56232983 - AluSq SINE Alu -14 299 1 457 280 99 65 chr10 89356372 89356836 -56232452 + L1M4 LINE L1 2475 2954 -3192 199 172 17 17 chr10 89357177 89357235 -56232053 + (TA)n Simple_repeat Simple_repeat 1 58 0 24 0 0 0 chr10 89358428 89358452 -56230836 + AT_rich Low_complexity Low_complexity 1 24 0 1153 317 69 35 chr10 89359398 89359929 -56229359 + MLT1G1 LTR MaLR 3 595 0 533 152 0 54 chr10 89360980 89361018 -56228270 + MER6B DNA MER2_type 1 40 -104 3323 137 73 36 chr10 89361018 89361648 -56227640 + MER39B LTR ERV1 1 653 0 533 152 0 54 chr10 89361648 89361701 -56227587 + MER6B DNA MER2_type 40 87 -123 225 239 15 0 chr10 89361932 89361999 -56227289 + L1M4 LINE L1 2694 2761 -3385 * 970 148 27 110 chr10 89361989 89362252 -56227036 + L1MA5 LINE L1 6059 6299 -1 1240 264 165 2 chr10 89362261 89362886 -56226402 + L1M4 LINE L1 2756 3482 -2664 238 392 69 0 chr10 89362886 89363016 -56226272 - MIR SINE MIR -104 158 20 714 235 108 0 chr10 89363079 89363245 -56226043 + MER5A DNA MER1_type 1 184 -5 21 36 0 0 chr10 89364094 89364122 -56225166 + AT_rich Low_complexity Low_complexity 1 28 0 3365 144 19 46 chr10 89364547 89365222 -56224066 - L1MC2 LINE L1 -8 6336 5680 560 301 6 24 chr10 89366600 89366939 -56222349 + L1M4 LINE L1 3118 3450 -2696 398 270 59 82 chr10 89367062 89367403 -56221885 + L1M4 LINE L1 3546 3878 -2268 30 0 0 0 chr10 89367436 89367466 -56221822 + AT_rich Low_complexity Low_complexity 1 30 0 17012 131 9 1 chr10 89367562 89371059 -56218229 - L1PA8A LINE L1 -2 6129 2611 7224 177 14 42 chr10 89371060 89372659 -56216629 - L1PA8A LINE L1 -3630 2516 961 183 100 0 0 chr10 89372659 89372689 -56216599 + (TTG)n Simple_repeat Simple_repeat 1 30 0 7224 177 14 42 chr10 89372689 89372709 -56216579 - L1PA8A LINE L1 -5185 961 942 * 39136 41 27 1 chr10 89372703 89377563 -56211725 - L1P LINE L1 -1161 4985 1 306 328 26 26 chr10 89377617 89377809 -56211479 - L1M4 LINE L1 -2983 3163 2972 23 33 0 0 chr10 89378495 89378525 -56210763 + AT_rich Low_complexity Low_complexity 1 30 0 1995 129 0 7 chr10 89378550 89378828 -56210460 - AluSx SINE Alu -36 276 1 2259 115 0 3 chr10 89379369 89379682 -56209606 - AluSx SINE Alu 0 312 1 478 313 13 13 chr10 89381844 89381994 -56207294 + MER5B DNA MER1_type 28 177 -1 2255 208 105 53 chr10 89382376 89383073 -56206215 + MER44D DNA MER2_type 1 605 0 312 297 94 23 chr10 89383946 89384074 -56205214 - MIR3 SINE MIR -46 162 26 2320 108 0 0 chr10 89384409 89384716 -56204572 - AluSx SINE Alu -5 307 1 263 239 0 0 chr10 89385308 89385354 -56203934 - MIR3 SINE MIR -48 160 115 2088 226 62 32 chr10 89385424 89385954 -56203334 + MER77 LTR ERV1 56 601 -4 1259 246 40 9 chr10 89386502 89386823 -56202465 + LTR53 LTR ERVL 189 519 0 183 80 0 0 chr10 89387065 89387090 -56202198 + (T)n Simple_repeat Simple_repeat 1 25 0 4161 194 52 18 chr10 89387397 89388225 -56201063 - MER21B LTR ERV1 -1 862 7 4382 144 66 29 chr10 89388341 89389774 -56199514 + pTR5 LTR ERV1 717 2606 0 1249 194 106 3 chr10 89389813 89390133 -56199155 - L1MA7 LINE L1 0 6291 5939 218 235 111 25 chr10 89390199 89390280 -56199008 + MIR SINE MIR 66 153 -109 32 75 0 0 chr10 89391913 89391980 -56197308 + AT_rich Low_complexity Low_complexity 1 67 0 22 80 0 0 chr10 89392172 89392222 -56197066 + AT_rich Low_complexity Low_complexity 1 50 0 226 344 148 16 chr10 89393034 89393284 -56196004 + L2 LINE L2 2560 2842 -472 1968 103 4 0 chr10 89393574 89393837 -56195451 - AluSp SINE Alu -12 301 38 218 180 20 20 chr10 89393960 89394010 -56195278 + (TAAA)n Simple_repeat Simple_repeat 2 51 0 279 271 12 47 chr10 89395392 89395477 -56193811 + L2 LINE L2 3191 3272 0 21 36 0 0 chr10 89396103 89396131 -56193157 + AT_rich Low_complexity Low_complexity 1 28 0 325 256 70 23 chr10 89396485 89396614 -56192674 + LTR16C LTR ERVL 357 491 0 22 0 0 0 chr10 89397650 89397672 -56191616 + AT_rich Low_complexity Low_complexity 1 22 0 1370 275 55 82 chr10 89398233 89398943 -56190345 - MER21B LTR ERV1 -149 714 24 304 291 82 38 chr10 89399196 89399354 -56189934 + MIR SINE MIR 36 200 -62 242 264 132 9 chr10 89400429 89400535 -56188753 - MIR SINE MIR -142 120 2 326 333 68 10 chr10 89400571 89400778 -56188510 + L3 LINE CR1 1284 1502 -75 21 0 0 0 chr10 89401390 89401411 -56187877 + AT_rich Low_complexity Low_complexity 1 21 0 575 305 77 18 chr10 89401772 89402057 -56187231 - MER46C DNA MER2_type -34 304 3 246 321 119 13 chr10 89402068 89402227 -56187061 - MIR SINE MIR -27 235 60 1553 218 61 21 chr10 89402228 89402605 -56186683 + MSTD LTR MaLR 1 392 -4 310 341 65 7 chr10 89403931 89404069 -56185219 + MIR SINE MIR 5 150 -112 195 69 0 0 chr10 89404150 89404179 -56185109 + (TTA)n Simple_repeat Simple_repeat 1 29 0 414 243 12 13 chr10 89405006 89405117 -56184171 + MLT1A1 LTR MaLR 11 122 -264 1988 59 0 0 chr10 89405119 89405355 -56183933 + AluY SINE Alu 1 236 -75 1210 50 0 0 chr10 89405355 89405496 -56183792 + AluY SINE Alu 158 298 -13 1231 190 9 9 chr10 89405496 89405712 -56183576 + MLT1A1 LTR MaLR 148 363 -2 1984 128 7 7 chr10 89405996 89406293 -56182995 + AluSx SINE Alu 2 298 -14 255 266 255 0 chr10 89406643 89406737 -56182551 + MER94 DNA DNA 3 120 -14 210 143 0 0 chr10 89407195 89407230 -56182058 + (TG)n Simple_repeat Simple_repeat 2 36 0 2351 82 3 0 chr10 89407629 89407922 -56181366 - AluY SINE Alu -17 294 1 263 257 46 37 chr10 89408563 89408672 -56180616 + MLT1K LTR MaLR 479 588 0 1822 135 0 24 chr10 89409707 89410046 -56179242 - AluJb SINE Alu 0 332 1 243 0 0 0 chr10 89410736 89410763 -56178525 + (A)n Simple_repeat Simple_repeat 1 27 0 6479 174 29 44 chr10 89411014 89412340 -56176948 + L1MC1 LINE L1 2 1308 -5118 6632 212 35 53 chr10 89412343 89415235 -56174053 + L1MC1 LINE L1 1710 4653 -1960 1170 148 0 0 chr10 89415235 89415404 -56173884 + AluSg/x SINE Alu 115 283 -27 6632 212 35 53 chr10 89415404 89415680 -56173608 + L1MC1 LINE L1 4653 4932 -1681 2292 107 0 0 chr10 89415680 89415971 -56173317 + AluSg SINE Alu 3 293 -17 6632 212 35 53 chr10 89415971 89417316 -56171972 + L1MC1 LINE L1 4932 6300 -313 1634 159 7 28 chr10 89417316 89417606 -56171682 + AluJo SINE Alu 1 284 -28 222 37 0 0 chr10 89417609 89417636 -56171652 + (GAAAA)n Simple_repeat Simple_repeat 4 30 0 6632 212 35 53 chr10 89417636 89418001 -56171287 + L1MC1 LINE L1 6302 6611 -2 264 163 12 38 chr10 89418002 89418109 -56171179 + (TTATA)n Simple_repeat Simple_repeat 1 104 0 1522 248 58 23 chr10 89418111 89419060 -56170228 + L1MC/D LINE L1 4661 5640 -602 2414 242 13 13 chr10 89419079 89419679 -56169609 + L1MD2 LINE L1 5528 6127 -232 488 290 55 72 chr10 89419833 89420592 -56168696 + L1MEd LINE L1 511 1256 -4863 287 287 14 29 chr10 89420587 89420732 -56168556 + L1M3 LINE L1 5461 5599 -567 * 415 287 28 66 chr10 89421075 89421546 -56167742 - L1MEd LINE L1 -4946 1173 721 727 217 9 91 chr10 89422005 89422226 -56167062 - MER20 DNA MER1_type 0 219 17 280 171 0 0 chr10 89422224 89422265 -56167023 + FRAM/FAM SINE Alu 28 68 -98 * 2114 127 0 13 chr10 89422275 89422589 -56166699 + AluSq SINE Alu 1 310 -3 262 287 69 55 chr10 89422687 89422889 -56166399 - L1MEd LINE L1 -5913 206 2 334 322 87 17 chr10 89423331 89423446 -56165842 + MIR SINE MIR 11 133 -129 1346 229 26 16 chr10 89423528 89423834 -56165454 + AluJo SINE Alu 1 309 -3 269 250 11 33 chr10 89424551 89424643 -56164645 + L1MC4 LINE L1 6613 6702 -1340 247 204 34 0 chr10 89424662 89424750 -56164538 + (CATA)n Simple_repeat Simple_repeat 2 92 0 2049 132 23 0 chr10 89425286 89425590 -56163698 - AluSx SINE Alu -1 311 1 264 149 0 0 chr10 89425972 89426019 -56163269 + (T)n Simple_repeat Simple_repeat 1 47 0 571 282 82 98 chr10 89426392 89426870 -56162418 - MLT1G3 LTR MaLR -5 544 1 2219 76 3 40 chr10 89427573 89427876 -56161412 - AluY SINE Alu -19 292 1 550 235 88 2 chr10 89428337 89428521 -56160767 + MER110A LTR ERV1 311 484 0 1445 169 38 13 chr10 89428548 89428909 -56160379 + L1M2 LINE L1 5088 5460 -743 2064 187 65 22 chr10 89428909 89429353 -56159935 - LTR32 LTR ERVL 0 471 9 584 131 163 15 chr10 89429316 89429524 -56159764 - LTR29 LTR ERV1 -356 266 1 * 36 53 0 0 chr10 89429536 89429593 -56159695 + AT_rich Low_complexity Low_complexity 1 57 0 2025 167 112 116 chr10 89429893 89430057 -56159231 + LTR8A LTR ERV1 1 164 -563 3793 138 39 0 chr10 89430057 89430668 -56158620 - MER41B LTR ERV1 0 635 1 2025 167 112 116 chr10 89430668 89431233 -56158055 + LTR8A LTR ERV1 164 727 0 226 245 0 0 chr10 89431234 89431283 -56158005 + (CATA)n Simple_repeat Simple_repeat 4 52 0 480 77 0 0 chr10 89431974 89432039 -56157249 + (TG)n Simple_repeat Simple_repeat 2 66 0 195 297 62 69 chr10 89432411 89432556 -56156732 + MIR3 SINE MIR 64 207 -1 1524 122 196 8 chr10 89433843 89434098 -56155190 - AluSg1 SINE Alu -6 303 1 230 373 118 9 chr10 89434219 89434329 -56154959 - L2 LINE L2 0 3272 3151 458 216 129 17 chr10 89435130 89435246 -56154042 - FLAM_C SINE Alu -3 130 2 5567 86 3 3 chr10 89435298 89436029 -56153259 - LTR17 LTR ERV1 -49 731 1 191 221 94 71 chr10 89436246 89436373 -56152915 - L2 LINE L2 -837 2477 2348 22 80 0 0 chr10 89437968 89438018 -56151270 + AT_rich Low_complexity Low_complexity 1 50 0 1535 171 7 43 chr10 89438251 89438550 -56150738 - AluSx SINE Alu -24 288 1 198 213 0 21 chr10 89439162 89439209 -56150079 + MIR SINE MIR 167 212 -50 355 323 184 14 chr10 89439919 89440136 -56149152 - MIR SINE MIR -3 259 6 455 321 158 38 chr10 89440141 89440671 -56148617 + L3 LINE CR1 961 1554 -23 1231 258 146 19 chr10 89442459 89442941 -56146347 - MLT1E1 LTR MaLR -8 635 104 368 287 19 0 chr10 89442912 89443020 -56146268 - MLT1E LTR MaLR -433 160 51 * 411 38 0 0 chr10 89443767 89443820 -56145468 + (TG)n Simple_repeat Simple_repeat 1 53 0 246 32 0 0 chr10 89443819 89443850 -56145438 + (GA)n Simple_repeat Simple_repeat 1 31 0 * 21 0 0 0 chr10 89444367 89444388 -56144900 + AT_rich Low_complexity Low_complexity 1 21 0 227 365 64 100 chr10 89446047 89446376 -56142912 + L2 LINE L2 2953 3269 -3 1791 110 0 0 chr10 89446557 89446793 -56142495 + AluSq SINE Alu 1 236 -77 225 0 0 0 chr10 89447290 89447315 -56141973 + (CA)n Simple_repeat Simple_repeat 2 26 0 327 308 71 44 chr10 89447850 89448032 -56141256 - MIR SINE MIR -27 235 49 201 74 0 0 chr10 89448428 89448455 -56140833 + (CA)n Simple_repeat Simple_repeat 2 28 0 1094 154 6 16 chr10 89448586 89448768 -56140520 + AluSg/x SINE Alu 120 299 -13 200 376 87 0 chr10 89449328 89449501 -56139787 + L2 LINE L2 2310 2497 -817 381 340 53 19 chr10 89451129 89451335 -56137953 - MIR SINE MIR -21 241 29 721 22 0 0 chr10 89451420 89451509 -56137779 - L1PA6 LINE L1 -191 5963 5875 1395 78 0 11 chr10 89451509 89451700 -56137588 + L1PA6 LINE L1 5963 6151 -3 25 99 0 0 chr10 89452316 89452397 -56136891 + AT_rich Low_complexity Low_complexity 1 81 0 249 183 0 50 chr10 89452584 89452644 -56136644 + GA-rich Low_complexity Low_complexity 2 58 0 207 100 0 0 chr10 89452923 89452953 -56136335 + (T)n Simple_repeat Simple_repeat 1 30 0 208 323 70 7 chr10 89453971 89454105 -56135183 - MER5B DNA MER1_type 0 189 29 5573 207 40 72 chr10 89454261 89454690 -56134598 - L1MB7 LINE L1 -65 6355 5914 2314 91 0 0 chr10 89454690 89454987 -56134301 + AluY SINE Alu 1 297 -14 5573 207 40 72 chr10 89454987 89457450 -56131838 - L1MB7 LINE L1 -506 5914 3549 281 89 22 0 chr10 89457450 89457495 -56131793 + (TCTA)n Simple_repeat Simple_repeat 3 48 0 5573 207 40 72 chr10 89457495 89457680 -56131608 - L1MB7 LINE L1 -2871 3549 3360 1584 212 80 20 chr10 89457705 89457759 -56131529 - L1MB7 LINE L1 -3443 2939 2890 13123 152 47 9 chr10 89457759 89459599 -56129689 - Tigger1 DNA MER2_type -1 2417 469 2208 132 6 3 chr10 89459599 89459910 -56129378 - AluSq SINE Alu -1 312 1 13123 152 47 9 chr10 89459910 89460398 -56128890 - Tigger1 DNA MER2_type -1949 469 1 1584 212 80 20 chr10 89460398 89460979 -56128309 - L1MB7 LINE L1 -3492 2890 2272 207 0 0 0 chr10 89461020 89461043 -56128245 + (TA)n Simple_repeat Simple_repeat 2 24 0 186 43 0 0 chr10 89461059 89461082 -56128206 + (T)n Simple_repeat Simple_repeat 1 23 0 2604 10 0 0 chr10 89461085 89461393 -56127895 - L1HS LINE L1 0 6155 5848 2254 84 14 0 chr10 89461415 89461712 -56127576 - AluY SINE Alu -10 301 1 351 265 38 83 chr10 89461715 89462004 -56127284 - L1M4c LINE L1 -4184 2462 2237 1812 170 0 29 chr10 89462004 89462315 -56126973 - AluJb SINE Alu -10 302 1 351 265 38 83 chr10 89462315 89462415 -56126873 - L1M4c LINE L1 -4409 2237 2134 458 184 10 10 chr10 89462419 89462522 -56126766 - L1MB8 LINE L1 -53 6125 6023 3546 193 34 37 chr10 89462626 89463925 -56125363 - L1MA9 LINE L1 -194 6006 4716 2229 88 0 3 chr10 89463925 89464209 -56125079 - AluSc SINE Alu -24 285 3 3546 193 34 37 chr10 89464209 89464311 -56124977 - L1MA9 LINE L1 -1484 4716 4615 935 248 18 5 chr10 89464316 89464538 -56124750 - L1MA9 LINE L1 -5716 239 15 5603 224 30 37 chr10 89464551 89466262 -56123026 - L1M4c LINE L1 -4729 1917 210 4033 113 180 82 chr10 89466262 89467566 -56121722 - pTR5 LTR ERV1 -143 2295 281 717 194 32 59 chr10 89467579 89467765 -56121523 - L1M4c LINE L1 -6360 182 2 189 0 0 0 chr10 89470414 89470435 -56118853 + (CA)n Simple_repeat Simple_repeat 1 21 0 2062 190 44 72 chr10 89470968 89471536 -56117752 + MER92C LTR ERV1 1 552 -2 2179 111 7 3 chr10 89473358 89473656 -56115632 + AluSc SINE Alu 1 299 -10 1677 207 27 0 chr10 89474065 89474403 -56114885 + MER7A DNA MER2_type 2 346 0 2052 131 0 0 chr10 89474498 89474823 -56114465 + AluSx SINE Alu 1 325 0 23 33 0 0 chr10 89475134 89475164 -56114124 + AT_rich Low_complexity Low_complexity 1 30 0 473 286 23 8 chr10 89475737 89475870 -56113418 + L2 LINE L2 3129 3263 -50 203 290 245 2 chr10 89476546 89476671 -56112617 - MIR SINE MIR -61 147 4 420 267 99 134 chr10 89478767 89479393 -56109895 - L1M2 LINE L1 -5490 1359 417 320 299 79 106 chr10 89479158 89479639 -56109649 + L1M2 LINE L1 539 1006 -5843 * 318 294 144 71 chr10 89479481 89479807 -56109481 - L1M2 LINE L1 -6024 825 476 * 395 282 55 103 chr10 89479948 89480345 -56108943 + L1M2 LINE L1 859 1236 -5613 205 138 0 0 chr10 89480413 89480442 -56108846 + (TCC)n Simple_repeat Simple_repeat 1 29 0 180 97 0 0 chr10 89485497 89485528 -56103760 + (T)n Simple_repeat Simple_repeat 1 31 0 237 250 0 26 chr10 89486719 89486795 -56102493 + (TATATG)n Simple_repeat Simple_repeat 5 78 0 244 309 0 32 chr10 89486817 89486911 -56102377 + MIR SINE MIR 75 165 -97 964 208 107 41 chr10 89488787 89489105 -56100183 - MER2 DNA MER2_type -6 339 1 1366 174 37 30 chr10 89489105 89489404 -56099884 - L1MA10 LINE L1 -35 6299 5999 1207 66 12 6 chr10 89490336 89490502 -56098786 + L1PA10 LINE L1 6000 6166 -2 717 225 147 35 chr10 89492044 89492302 -56096986 + L1ME3A LINE L1 5858 6144 -26 22 0 0 0 chr10 89494657 89494679 -56094609 + AT_rich Low_complexity Low_complexity 1 22 0 280 261 88 53 chr10 89496020 89496177 -56093111 + MIR3 SINE MIR 13 175 -33 206 206 15 0 chr10 89496576 89496644 -56092644 + (TA)n Simple_repeat Simple_repeat 2 70 0 2082 131 12 0 chr10 89496949 89497293 -56091995 + L1MA2 LINE L1 5957 6304 0 274 289 69 13 chr10 89497380 89497539 -56091749 - L1ME4a LINE L1 -4 6117 5950 839 151 5 107 chr10 89498309 89498380 -56090908 - MLT1B LTR MaLR -2 388 311 1992 145 44 0 chr10 89498380 89498677 -56090611 + AluSx SINE Alu 1 310 -2 839 151 5 107 chr10 89498677 89498810 -56090478 - MLT1B LTR MaLR -79 311 205 441 165 38 0 chr10 89498846 89498925 -56090363 - MLT1B LTR MaLR -308 82 1 629 333 153 25 chr10 89501121 89502027 -56087261 - L2 LINE L2 -2 3311 2283 386 223 31 124 chr10 89502217 89502410 -56086878 + MER5B DNA MER1_type 4 178 0 297 241 0 46 chr10 89503211 89503319 -56085969 + L1ME4a LINE L1 5961 6063 -58 220 265 0 0 chr10 89503486 89503535 -56085753 + MIR SINE MIR 148 196 -66 295 291 85 60 chr10 89503750 89504032 -56085256 + MLT1L LTR MaLR 126 414 -201 1801 109 109 7 chr10 89504285 89504569 -56084719 - AluSq SINE Alu 0 313 1 1663 199 7 10 chr10 89505706 89506012 -56083276 + AluJo SINE Alu 1 305 -7 195 100 0 0 chr10 89506271 89506301 -56082987 + (TG)n Simple_repeat Simple_repeat 2 31 0 1175 199 36 58 chr10 89506650 89507012 -56082276 + MLT1A1 LTR MaLR 12 365 0 301 301 92 43 chr10 89507212 89507375 -56081913 - MIR SINE MIR -5 257 87 207 0 0 0 chr10 89508296 89508319 -56080969 + (TA)n Simple_repeat Simple_repeat 1 23 0 2129 147 0 0 chr10 89508319 89508631 -56080657 - AluSq SINE Alu -1 312 1 436 352 128 18 chr10 89508672 89509070 -56080218 - L3 LINE CR1 -7 1570 1129 522 227 84 13 chr10 89509118 89509272 -56080016 + MIR SINE MIR 84 248 -14 236 349 46 28 chr10 89509424 89509533 -56079755 - L3 LINE CR1 -1187 390 280 241 227 74 147 chr10 89510358 89510521 -56078767 + MIR SINE MIR 112 262 0 234 0 0 0 chr10 89510530 89510556 -56078732 + (CAT)n Simple_repeat Simple_repeat 2 27 0 852 316 140 22 chr10 89510722 89511394 -56077894 - L2 LINE L2 -239 3074 2313 294 413 7 0 chr10 89512809 89512947 -56076341 + MIR3 SINE MIR 37 175 -33 185 183 28 49 chr10 89513214 89513265 -56076023 + (ATGGTG)n Simple_repeat Simple_repeat 4 55 -87 1658 229 46 20 chr10 89513265 89513720 -56075568 - MLT1C LTR MaLR 0 467 1 185 183 28 49 chr10 89513720 89513810 -56075478 + (ATGGTG)n Simple_repeat Simple_repeat 55 142 0 1478 199 51 14 chr10 89514962 89515141 -56074147 - AluJo SINE Alu -5 307 111 189 0 0 0 chr10 89515141 89515162 -56074126 + (TTTTA)n Simple_repeat Simple_repeat 5 25 0 1478 199 51 14 chr10 89515162 89515278 -56074010 - AluJo SINE Alu -201 111 1 234 0 0 0 chr10 89515925 89515951 -56073337 + (T)n Simple_repeat Simple_repeat 1 26 0 212 271 0 0 chr10 89516410 89516469 -56072819 + T-rich Low_complexity Low_complexity 1 59 0 180 0 0 0 chr10 89516541 89516561 -56072727 + (ATG)n Simple_repeat Simple_repeat 2 21 0 1707 181 0 7 chr10 89516562 89516843 -56072445 - AluJo SINE Alu -33 279 1 235 358 92 12 chr10 89516951 89517203 -56072085 - L2 LINE L2 -255 3058 2791 236 371 35 0 chr10 89517308 89517451 -56071837 + MIR SINE MIR 82 229 -33 2351 102 0 0 chr10 89517740 89518045 -56071243 - AluSx SINE Alu -7 305 1 27 0 0 0 chr10 89518518 89518545 -56070743 + AT_rich Low_complexity Low_complexity 1 27 0 1933 167 10 6 chr10 89518772 89518891 -56070397 + AluJo SINE Alu 1 118 -194 243 0 0 0 chr10 89518891 89518918 -56070370 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1933 167 10 6 chr10 89518918 89519109 -56070179 + AluJo SINE Alu 118 312 0 1090 183 112 18 chr10 89520246 89520531 -56068757 - MER33 DNA MER1_type -12 312 1 357 329 21 28 chr10 89521186 89521329 -56067959 - MIR SINE MIR -73 189 48 188 234 0 16 chr10 89521747 89521811 -56067477 + (TAAA)n Simple_repeat Simple_repeat 2 64 0 363 44 0 0 chr10 89523296 89523341 -56065947 + (CA)n Simple_repeat Simple_repeat 2 46 0 189 0 0 0 chr10 89523830 89523851 -56065437 + (CAT)n Simple_repeat Simple_repeat 3 23 0 575 311 106 45 chr10 89524893 89525472 -56063816 - L1ME4a LINE L1 -27 6094 5446 213 39 0 0 chr10 89525472 89525498 -56063790 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 575 311 106 45 chr10 89525498 89525703 -56063585 - L1ME4a LINE L1 -675 5446 5255 1522 156 36 20 chr10 89526616 89526918 -56062370 - L1PB4 LINE L1 -28 6128 5822 2183 28 0 0 chr10 89527574 89527826 -56061462 - AluY SINE Alu -59 252 1 1915 138 7 14 chr10 89530429 89530742 -56058546 - AluSq SINE Alu 0 311 1 29 47 0 0 chr10 89530820 89530863 -56058425 + AT_rich Low_complexity Low_complexity 1 43 0 348 300 80 13 chr10 89531139 89531289 -56057999 + MIR SINE MIR 67 226 -36 362 171 188 17 chr10 89531904 89532021 -56057267 - L1MC2 LINE L1 -1 6343 6207 1466 142 12 4 chr10 89532029 89532275 -56057013 + MER4D LTR ERV1 1 248 -655 21 0 0 0 chr10 89532295 89532316 -56056972 + AT_rich Low_complexity Low_complexity 1 21 0 228 281 31 52 chr10 89532552 89532648 -56056640 - MER5B DNA MER1_type 0 178 85 225 254 0 0 chr10 89532967 89533026 -56056262 + L1MC/D LINE L1 5713 5771 -2037 1538 177 21 21 chr10 89533157 89533440 -56055848 - AluJo SINE Alu -21 291 9 333 287 85 11 chr10 89534083 89534177 -56055111 - MER5B DNA MER1_type -74 104 4 301 247 112 37 chr10 89534614 89534800 -56054488 - MER21B LTR ERV1 -272 659 379 201 154 0 0 chr10 89534832 89534871 -56054417 + A-rich Low_complexity Low_complexity 1 39 0 529 289 40 61 chr10 89535422 89535699 -56053589 - MER21B LTR ERV1 -569 294 24 1134 177 9 22 chr10 89536271 89536503 -56052785 - MSTA LTR MaLR 0 428 200 361 76 30 0 chr10 89536503 89536569 -56052719 + (GA)n Simple_repeat Simple_repeat 2 69 0 837 190 123 5 chr10 89536570 89536765 -56052523 - MSTA LTR MaLR -210 218 1 2361 100 0 6 chr10 89537148 89537459 -56051829 + AluSg1 SINE Alu 1 309 0 272 292 117 25 chr10 89537622 89537742 -56051546 - MIR SINE MIR -76 186 56 185 0 40 0 chr10 89537743 89537768 -56051520 + (TTA)n Simple_repeat Simple_repeat 3 28 0 951 48 0 16 chr10 89537768 89537892 -56051396 - L1PA4 LINE L1 -18 6137 6016 22 0 0 0 chr10 89538347 89538369 -56050919 + AT_rich Low_complexity Low_complexity 1 22 0 207 0 0 0 chr10 89539890 89539913 -56049375 + (CAA)n Simple_repeat Simple_repeat 2 24 0 260 277 153 85 chr10 89539986 89540198 -56049090 + L2 LINE L2 2939 3180 -133 441 0 0 0 chr10 89540198 89540247 -56049041 + (CA)n Simple_repeat Simple_repeat 2 50 0 260 277 153 85 chr10 89540247 89540341 -56048947 + L2 LINE L2 3180 3266 -47 314 319 30 15 chr10 89540976 89541111 -56048177 - MLT1J LTR MaLR -130 381 245 10674 201 52 18 chr10 89541163 89542940 -56046348 - L1MB2 LINE L1 -7 6164 4448 207 0 0 0 chr10 89542940 89542963 -56046325 + (TG)n Simple_repeat Simple_repeat 1 23 0 10674 201 52 18 chr10 89542963 89544656 -56044632 - L1MB2 LINE L1 -1723 4448 2581 1152 200 11 57 chr10 89544674 89544939 -56044349 - AluJo SINE Alu -16 296 44 315 314 114 0 chr10 89544950 89545125 -56044163 - MLT1J LTR MaLR -297 214 20 1450 195 27 0 chr10 89547428 89547684 -56041604 + AluJo SINE Alu 2 264 -48 241 149 46 35 chr10 89549578 89549665 -56039623 + CT-rich Low_complexity Low_complexity 3 90 0 2510 150 10 74 chr10 89549961 89550346 -56038942 + MLT1C LTR MaLR 1 348 -119 2056 122 0 0 chr10 89550346 89550625 -56038663 - AluSx SINE Alu -20 292 14 2510 150 10 74 chr10 89550625 89550738 -56038550 + MLT1C LTR MaLR 348 467 0 189 121 0 0 chr10 89550927 89550960 -56038328 + (TG)n Simple_repeat Simple_repeat 2 34 0 1389 204 52 89 chr10 89551246 89551731 -56037557 - MLT1C LTR MaLR 0 467 1 653 176 23 15 chr10 89552516 89552647 -56036641 - L1MC1 LINE L1 -14 6319 6188 196 313 125 47 chr10 89552926 89553054 -56036234 + MIR3 SINE MIR 12 149 -59 1579 282 63 26 chr10 89553124 89553663 -56035625 - MER77 LTR ERV1 -6 599 41 344 273 60 47 chr10 89554706 89554856 -56034432 - MIR3 SINE MIR -54 154 3 4076 26 62 0 chr10 89556075 89556572 -56032716 + L1PA4 LINE L1 5624 6151 -4 201 121 0 0 chr10 89556690 89556723 -56032565 + (TG)n Simple_repeat Simple_repeat 1 33 0 225 259 17 0 chr10 89556723 89556781 -56032507 + GA-rich Low_complexity Low_complexity 6 64 0 1139 194 73 45 chr10 89556928 89557216 -56032072 - AluJo SINE Alu -6 296 1 28 0 0 0 chr10 89558417 89558445 -56030843 + AT_rich Low_complexity Low_complexity 1 28 0 245 91 78 13 chr10 89559451 89559528 -56029760 + (TA)n Simple_repeat Simple_repeat 1 82 0 250 194 0 147 chr10 89559533 89559681 -56029607 - MLT2D LTR ERVL -48 366 229 870 321 34 12 chr10 89560001 89560328 -56028960 + L2 LINE L2 2108 2441 -873 1314 241 60 29 chr10 89560329 89560744 -56028544 + MLT1G1 LTR MaLR 1 428 -167 1032 260 89 14 chr10 89560841 89561268 -56028020 + L2 LINE L2 2456 2918 -354 660 265 45 25 chr10 89561446 89561646 -56027642 + MLT1J2 LTR MaLR 245 448 -2 448 283 186 39 chr10 89561653 89561964 -56027324 + L2 LINE L2 2921 3277 -36 253 300 118 9 chr10 89562072 89562182 -56027106 + MIR SINE MIR 94 215 -47 503 234 19 106 chr10 89562819 89562942 -56026346 + MER106A DNA MER1_type 3 94 -142 1912 127 48 7 chr10 89562942 89563233 -56026055 + AluSx SINE Alu 1 303 -9 503 234 19 106 chr10 89563233 89563365 -56025923 + MER106A DNA MER1_type 94 236 0 490 321 110 44 chr10 89563816 89564424 -56024864 - L1M4 LINE L1 -765 5381 4734 239 309 34 54 chr10 89564755 89564904 -56024384 - MIR SINE MIR -62 200 55 497 275 108 12 chr10 89566260 89566427 -56022861 + MER5A DNA MER1_type 3 185 -4 269 297 155 19 chr10 89566442 89566597 -56022691 + MIR SINE MIR 20 195 -67 658 248 177 71 chr10 89566902 89567439 -56021849 - MLT1G1 LTR MaLR 0 595 2 2876 0 0 0 chr10 89567447 89567754 -56021534 - AluYa5 SINE Alu -4 307 1 267 266 65 39 chr10 89568402 89568556 -56020732 - L1ME4a LINE L1 -93 6028 5871 869 114 0 0 chr10 89568623 89568746 -56020542 + AluSg/x SINE Alu 189 311 -1 415 314 113 39 chr10 89568781 89569223 -56020065 - L1ME4a LINE L1 -312 5809 5335 23 33 0 0 chr10 89569332 89569362 -56019926 + AT_rich Low_complexity Low_complexity 1 30 0 188 265 0 0 chr10 89569677 89569711 -56019577 - MIR SINE MIR -209 53 20 387 298 118 35 chr10 89569767 89570594 -56018694 - L1M4 LINE L1 -1493 4653 3758 232 143 57 14 chr10 89570597 89570667 -56018621 + (TA)n Simple_repeat Simple_repeat 2 74 0 811 133 0 8 chr10 89570800 89570920 -56018368 - FLAM_C SINE Alu -12 131 13 21 36 0 0 chr10 89571345 89571373 -56017915 + AT_rich Low_complexity Low_complexity 1 28 0 628 304 89 62 chr10 89571424 89572050 -56017238 - L1M4 LINE L1 -3083 3063 2421 244 220 0 0 chr10 89572421 89572471 -56016817 + MER115 DNA AcHobo 21 70 -623 627 268 82 30 chr10 89572828 89573059 -56016229 + MER115 DNA AcHobo 451 693 0 261 0 0 0 chr10 89574094 89574123 -56015165 + (TG)n Simple_repeat Simple_repeat 1 29 0 187 320 0 0 chr10 89574317 89574367 -56014921 + L2 LINE L2 3252 3301 -12 247 25 50 0 chr10 89574969 89575009 -56014279 + (TG)n Simple_repeat Simple_repeat 1 42 0 641 231 40 23 chr10 89575087 89575179 -56014109 - MER69A DNA AcHobo -2349 177 79 2173 124 0 3 chr10 89575179 89575478 -56013810 + AluSq SINE Alu 1 298 -15 641 231 40 23 chr10 89575478 89575558 -56013730 - MER69A DNA AcHobo -2447 79 2 2810 253 57 69 chr10 89575815 89577070 -56012218 + L1MEc LINE L1 203 1442 -5121 239 330 0 0 chr10 89577098 89577186 -56012102 + L1MEc LINE L1 1368 1455 -4929 226 111 0 44 chr10 89577187 89577232 -56012056 + (TTTAA)n Simple_repeat Simple_repeat 3 45 0 5899 98 6 2 chr10 89577244 89578617 -56010671 - L1PA13 LINE L1 -5 6158 4766 307 156 47 31 chr10 89578617 89578681 -56010607 + L1MEc LINE L1 1609 1673 -4890 1986 247 21 28 chr10 89578707 89579242 -56010046 - LTR31 LTR ERV1 -15 604 74 606 63 0 0 chr10 89579636 89579715 -56009573 + (TCTA)n Simple_repeat Simple_repeat 3 81 0 777 259 17 35 chr10 89579747 89579979 -56009309 - LTR16C LTR ERVL 0 491 264 1525 255 68 37 chr10 89579994 89580480 -56008808 + MLT1D LTR MaLR 5 505 0 273 308 0 0 chr10 89580702 89580767 -56008521 - L2 LINE L2 -5 3267 3203 200 355 50 43 chr10 89581576 89581717 -56007571 + L2 LINE L2 3169 3310 -3 263 239 9 124 chr10 89582071 89582184 -56007104 + MIR SINE MIR 109 208 -54 1782 133 25 12 chr10 89582211 89582535 -56006753 - L1MA5A LINE L1 0 6297 5970 747 214 0 0 chr10 89583046 89583177 -56006111 - FLAM_C SINE Alu -2 131 1 2580 62 0 0 chr10 89583230 89583534 -56005754 + AluSc SINE Alu 1 304 -5 21 0 0 0 chr10 89584136 89584157 -56005131 + AT_rich Low_complexity Low_complexity 1 21 0 253 355 94 0 chr10 89584564 89584702 -56004586 + MIR SINE MIR 30 180 -28 1549 205 29 44 chr10 89584978 89585363 -56003925 - MLT1B LTR MaLR 0 390 12 1810 245 24 5 chr10 89585374 89585787 -56003501 - MLT1B-int LTR MaLR -4 1731 1311 348 256 100 0 chr10 89585968 89586058 -56003230 - MLT1B-int LTR MaLR -954 781 683 2369 231 11 18 chr10 89586142 89586819 -56002469 - MLT1B-int LTR MaLR -487 884 1 1592 175 77 57 chr10 89586819 89587185 -56002103 - MLT1B LTR MaLR 0 390 18 200 299 0 65 chr10 89587899 89587976 -56001312 - L3 LINE CR1 -536 1041 970 1763 225 67 19 chr10 89588117 89588597 -56000691 + MLT1D LTR MaLR 1 503 -2 526 242 219 14 chr10 89589397 89589612 -55999676 - MIR SINE MIR 0 262 4 354 270 51 7 chr10 89590099 89590236 -55999052 - MER112 DNA MER1_type -35 225 83 24 53 0 0 chr10 89590620 89590658 -55998630 + AT_rich Low_complexity Low_complexity 1 38 0 1241 180 70 33 chr10 89591008 89591280 -55998008 - AluJo SINE Alu -7 305 24 2119 93 10 33 chr10 89591404 89591706 -55997582 - AluSx SINE Alu -17 295 1 845 336 122 31 chr10 89593081 89593817 -55995471 - L2 LINE L2 -478 2836 2034 458 307 109 29 chr10 89593994 89594414 -55994874 - L2 LINE L2 -1283 2031 1578 294 354 10 0 chr10 89594455 89594554 -55994734 + MIR3 SINE MIR 104 203 -5 225 231 51 39 chr10 89595625 89595703 -55993585 + MIR SINE MIR 164 242 -20 35 54 0 0 chr10 89596496 89596552 -55992736 + AT_rich Low_complexity Low_complexity 1 56 0 256 260 106 0 chr10 89597201 89597305 -55991983 - MER103 DNA DNA -46 120 6 344 295 0 33 chr10 89597538 89597660 -55991628 - MIR3 SINE MIR -31 177 60 1754 186 3 0 chr10 89597664 89597965 -55991323 - AluJo SINE Alu -8 304 3 336 286 45 0 chr10 89598362 89598474 -55990814 - L1ME LINE L1 -482 5639 5523 307 283 81 103 chr10 89598915 89599322 -55989966 - HAL1b LINE L1 -782 566 169 244 0 56 0 chr10 89600169 89600205 -55989083 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 326 287 30 10 chr10 89600973 89601074 -55988214 + GA-rich Low_complexity Low_complexity 6 108 0 374 286 70 29 chr10 89601877 89602048 -55987240 + MIR SINE MIR 70 247 -15 317 284 52 26 chr10 89602861 89603016 -55986272 + MIR SINE MIR 100 258 -4 1648 137 56 0 chr10 89603173 89603422 -55985866 - AluSq SINE Alu -48 265 3 248 282 55 64 chr10 89604570 89604680 -55984608 - MIR SINE MIR -75 187 79 352 306 40 23 chr10 89604830 89605003 -55984285 + L2 LINE L2 2458 2633 -681 271 309 0 32 chr10 89605497 89605542 -55983746 + A-rich Low_complexity Low_complexity 5 50 -76 2064 157 0 0 chr10 89605542 89605848 -55983440 + AluSx SINE Alu 1 306 -6 271 309 0 32 chr10 89605848 89605928 -55983360 + A-rich Low_complexity Low_complexity 50 126 0 23 0 0 0 chr10 89606769 89606792 -55982496 + AT_rich Low_complexity Low_complexity 1 23 0 184 156 178 0 chr10 89607172 89607217 -55982071 - L2 LINE L2 -1 3271 3219 1172 310 134 28 chr10 89607239 89608183 -55981105 - L2 LINE L2 -579 2735 1691 573 161 0 0 chr10 89608193 89608286 -55981002 + FLAM_A SINE Alu 1 93 -49 423 0 0 0 chr10 89608310 89608357 -55980931 + (CA)n Simple_repeat Simple_repeat 2 48 0 254 279 15 0 chr10 89608570 89608638 -55980650 - MER112 DNA MER1_type -188 72 4 383 258 32 0 chr10 89608650 89608743 -55980545 - L2 LINE L2 -1638 1676 1581 1860 200 26 26 chr10 89608915 89609300 -55979988 + MLT1B LTR MaLR 6 390 0 314 194 54 116 chr10 89609329 89609458 -55979830 - MIR SINE MIR -74 188 68 234 0 0 0 chr10 89610219 89610245 -55979043 + (TG)n Simple_repeat Simple_repeat 1 26 0 385 284 79 42 chr10 89610440 89611400 -55977888 - L1MC/D LINE L1 -758 5388 4487 2342 88 3 7 chr10 89611521 89611829 -55977459 - AluSc SINE Alu -2 307 1 321 378 26 26 chr10 89612325 89612476 -55976812 - L2 LINE L2 -5 3267 3117 272 290 33 0 chr10 89614473 89614581 -55974707 - MIR SINE MIR -62 146 77 1972 144 40 8 chr10 89615397 89615750 -55973538 - THE1B LTR MaLR 0 364 1 10958 112 1 28 chr10 89615750 89617373 -55971915 - THE1B-int LTR MaLR 0 1580 2 2238 130 31 6 chr10 89617374 89617729 -55971559 - THE1B LTR MaLR 0 364 1 384 313 46 41 chr10 89618510 89618705 -55970583 - MIR SINE MIR -7 255 60 268 235 0 15 chr10 89618816 89618884 -55970404 - MIR SINE MIR -31 231 165 1555 127 163 36 chr10 89619735 89620066 -55969222 + THE1C LTR MaLR 3 375 0 492 279 71 11 chr10 89620094 89620277 -55969011 + MIR SINE MIR 69 262 0 19153 42 2 0 chr10 89621256 89624411 -55964877 - L1PA5 LINE L1 0 6154 3000 185 355 0 0 chr10 89624677 89624739 -55964549 - L2 LINE L2 -9 3304 3243 196 256 0 0 chr10 89624951 89624994 -55964294 - MIR SINE MIR -81 127 85 447 19 0 0 chr10 89626105 89626157 -55963131 + (TG)n Simple_repeat Simple_repeat 2 53 0 706 206 44 25 chr10 89626992 89627232 -55962056 + MER33 DNA MER1_type 1 233 -91 916 133 28 11 chr10 89627235 89627416 -55961872 - L1MA4 LINE L1 -8 6292 6109 6055 181 23 6 chr10 89627428 89628708 -55960580 - L1 LINE L1 -1741 4405 3104 627 152 0 51 chr10 89628717 89628855 -55960433 + MER33 DNA MER1_type 194 324 0 274 289 89 50 chr10 89628936 89629116 -55960172 + MIR3 SINE MIR 14 200 -8 29 47 0 0 chr10 89629533 89629576 -55959712 + AT_rich Low_complexity Low_complexity 1 43 0 24 32 0 0 chr10 89629739 89629770 -55959518 + AT_rich Low_complexity Low_complexity 1 31 0 469 314 48 30 chr10 89629781 89630115 -55959173 - L1ME LINE L1 -444 5677 5338 180 0 0 0 chr10 89630157 89630177 -55959111 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 29 0 0 0 chr10 89630623 89630652 -55958636 + AT_rich Low_complexity Low_complexity 1 29 0 276 100 0 0 chr10 89630989 89631029 -55958259 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 216 0 0 0 chr10 89632599 89632623 -55956665 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 183 231 0 0 chr10 89632821 89632860 -55956428 + L2 LINE L2 3231 3269 -3 2179 122 0 0 chr10 89633250 89633546 -55955742 + AluSx SINE Alu 3 298 -14 348 307 68 16 chr10 89633563 89633755 -55955533 + MIR SINE MIR 60 261 -1 180 0 0 0 chr10 89636713 89636733 -55952555 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1561 187 75 12 chr10 89637252 89637653 -55951635 - LTR37A LTR ERV1 0 426 1 538 324 31 8 chr10 89638725 89638946 -55950342 + MIR SINE MIR 3 226 -36 181 255 75 38 chr10 89639089 89639195 -55950093 + L2 LINE L2 3164 3273 -40 495 300 100 11 chr10 89640661 89640851 -55948437 - MIR SINE MIR -35 227 21 804 133 36 30 chr10 89640912 89641078 -55948210 - L1MB1 LINE L1 0 6168 6002 196 291 17 94 chr10 89642007 89642124 -55947164 + MIR SINE MIR 80 187 -75 294 349 53 14 chr10 89642634 89642843 -55946445 - MIR SINE MIR 0 262 46 221 324 67 19 chr10 89644300 89644405 -55944883 - MIR SINE MIR -142 120 11 322 219 10 52 chr10 89644638 89644734 -55944554 - L1MC4 LINE L1 -1337 6705 6614 269 289 44 35 chr10 89644968 89645082 -55944206 - MIR SINE MIR -141 121 7 236 191 32 0 chr10 89646038 89646101 -55943187 + CT-rich Low_complexity Low_complexity 3 67 0 356 240 68 123 chr10 89646206 89646352 -55942936 - MIR3 SINE MIR -39 169 32 30 59 0 0 chr10 89646509 89646560 -55942728 + AT_rich Low_complexity Low_complexity 1 51 0 4525 171 16 28 chr10 89648044 89648881 -55940407 - MER6 DNA MER2_type 0 865 39 15971 33 0 0 chr10 89648900 89651569 -55937719 - L1PA3 LINE L1 -3 6152 3474 14811 33 2 1 chr10 89651569 89653404 -55935884 + L1PA3 LINE L1 1635 3471 -2675 541 83 0 0 chr10 89654586 89654658 -55934630 + MADE1 DNA Mariner 2 73 -7 285 186 0 0 chr10 89654718 89654788 -55934500 + (TGGA)n Simple_repeat Simple_repeat 2 71 0 276 230 106 80 chr10 89655571 89655684 -55933604 + MIR3 SINE MIR 6 121 -87 298 261 6 36 chr10 89657302 89657467 -55931821 + (TTTA)n Simple_repeat Simple_repeat 1 160 0 351 302 88 103 chr10 89657507 89657894 -55931394 - MLT1J1 LTR MaLR 0 446 66 2105 259 129 146 chr10 89657945 89659087 -55930201 - L2 LINE L2 -62 3251 2090 1204 186 25 61 chr10 89659087 89659367 -55929921 + AluJo SINE Alu 43 312 0 2105 259 129 146 chr10 89659367 89659518 -55929770 - L2 LINE L2 -1223 2090 1938 2259 97 7 3 chr10 89659518 89659828 -55929460 + AluY SINE Alu 1 311 0 2105 259 129 146 chr10 89659828 89660932 -55928356 - L2 LINE L2 -1375 1938 622 380 309 72 19 chr10 89661010 89661272 -55928016 - L1MEc LINE L1 -4722 1588 1313 605 303 86 41 chr10 89661283 89662039 -55927249 - L1MEc LINE L1 -4885 1234 445 307 326 13 101 chr10 89662165 89662392 -55926896 - L1MEc LINE L1 -5835 284 78 25 0 0 0 chr10 89662875 89662900 -55926388 + AT_rich Low_complexity Low_complexity 1 25 0 503 357 83 27 chr10 89663467 89663915 -55925373 - L2 LINE L2 -540 2774 2302 292 279 153 49 chr10 89664275 89664458 -55924830 + MIR SINE MIR 61 262 0 2004 107 0 7 chr10 89665402 89665697 -55923591 + AluSg SINE Alu 11 303 0 252 59 0 0 chr10 89666158 89666183 -55923105 + (CA)n Simple_repeat Simple_repeat 1 59 0 252 59 0 0 chr10 89666183 89666217 -55923071 + (CA)n Simple_repeat Simple_repeat 1 34 0 2256 114 3 0 chr10 89666645 89666951 -55922337 + AluSx SINE Alu 1 307 -5 393 184 0 57 chr10 89667966 89668107 -55921181 + GA-rich Low_complexity Low_complexity 2 134 0 37 23 0 0 chr10 89668683 89668727 -55920561 + AT_rich Low_complexity Low_complexity 1 44 0 231 220 0 0 chr10 89669862 89669912 -55919376 + L2 LINE L2 3262 3311 -2 221 355 86 35 chr10 89669962 89670159 -55919129 + L3 LINE CR1 1366 1572 -5 1727 117 8 0 chr10 89671729 89671969 -55917319 - AluSq SINE Alu -71 242 1 353 323 126 52 chr10 89672704 89673216 -55916072 - L2 LINE L2 -2 3270 2664 363 281 141 27 chr10 89673727 89673912 -55915376 - MIR SINE MIR -25 237 32 21 36 0 0 chr10 89674822 89674850 -55914438 + AT_rich Low_complexity Low_complexity 1 28 0 287 292 0 17 chr10 89674993 89675113 -55914175 + L1ME4a LINE L1 5316 5433 -688 259 325 112 5 chr10 89675175 89675381 -55913907 + L1ME4a LINE L1 5553 5780 -341 1147 316 58 18 chr10 89675449 89676210 -55913078 - L2 LINE L2 0 3313 2524 305 289 11 0 chr10 89676520 89676610 -55912678 - L2 LINE L2 -773 2541 2451 346 238 79 8 chr10 89676952 89677078 -55912210 + L1ME4a LINE L1 5974 6108 -13 1724 167 0 31 chr10 89677078 89677396 -55911892 - AluJo SINE Alu -4 308 1 345 285 62 65 chr10 89677859 89678150 -55911138 - L1MC4a LINE L1 -1926 5882 5593 727 298 86 81 chr10 89678162 89678889 -55910399 - L2 LINE L2 0 3313 2584 1423 179 0 27 chr10 89678901 89679158 -55910130 + AluJo SINE Alu 33 282 -30 308 299 143 20 chr10 89679444 89679688 -55909600 - L1MC4a LINE L1 -754 5392 5119 21 0 0 0 chr10 89679936 89679957 -55909331 + AT_rich Low_complexity Low_complexity 1 21 0 182 103 0 26 chr10 89680028 89680067 -55909221 + (TG)n Simple_repeat Simple_repeat 2 39 0 2287 161 20 15 chr10 89680792 89681201 -55908087 + MSTB LTR MaLR 1 411 -15 30 0 0 0 chr10 89682433 89682463 -55906825 + AT_rich Low_complexity Low_complexity 1 30 0 2275 56 0 0 chr10 89682684 89682950 -55906338 - AluY SINE Alu -24 287 22 1985 89 107 0 chr10 89683378 89683659 -55905629 - AluSq SINE Alu -2 311 1 3167 133 90 19 chr10 89683659 89684236 -55905052 - L1MC1 LINE L1 -8 6325 5708 908 117 50 100 chr10 89685046 89685286 -55904002 - L1MB4 LINE L1 -8 6172 5945 589 227 0 8 chr10 89686195 89686323 -55902965 + FLAM_A SINE Alu 1 127 -15 281 274 14 0 chr10 89686667 89686740 -55902548 - MIR3 SINE MIR -40 168 95 811 194 18 18 chr10 89687266 89687431 -55901857 - FRAM SINE Alu -16 160 1 30 45 0 0 chr10 89687576 89687620 -55901668 + AT_rich Low_complexity Low_complexity 1 44 0 2098 91 9 69 chr10 89687917 89688236 -55901052 - AluSp SINE Alu -11 302 3 2259 102 0 0 chr10 89688267 89688561 -55900727 + AluSx SINE Alu 1 294 -18 1477 224 52 31 chr10 89689673 89689959 -55899329 - MSTD LTR MaLR 0 396 98 2164 117 3 7 chr10 89689959 89690259 -55899029 - AluSq SINE Alu -14 299 1 1477 224 52 31 chr10 89690259 89690360 -55898928 - MSTD LTR MaLR -298 98 1 294 304 87 36 chr10 89692154 89692292 -55896996 + MLT1K LTR MaLR 159 303 -285 266 250 11 22 chr10 89692489 89692581 -55896707 + CT-rich Low_complexity Low_complexity 2 92 0 261 424 13 0 chr10 89694214 89694365 -55894923 + MIR3 SINE MIR 49 201 -7 21 36 0 0 chr10 89694756 89694784 -55894504 + AT_rich Low_complexity Low_complexity 1 28 0 3135 218 44 30 chr10 89695459 89696279 -55893009 - L1MB4 LINE L1 -6 6174 5344 321 280 49 72 chr10 89696366 89696630 -55892658 - MIR SINE MIR -4 258 1 219 139 0 0 chr10 89696704 89696740 -55892548 + (CA)n Simple_repeat Simple_repeat 1 36 0 1177 268 100 39 chr10 89696905 89697394 -55891894 + LTR40a LTR ERVL 1 519 0 253 276 155 17 chr10 89697398 89697514 -55891774 - MIR SINE MIR -8 254 123 3144 180 24 73 chr10 89698573 89699352 -55889936 + L1PB3 LINE L1 5401 6141 -13 417 198 0 12 chr10 89699542 89699623 -55889665 + MLT1J LTR MaLR 378 457 -54 2176 110 13 3 chr10 89700516 89700817 -55888471 + AluSc SINE Alu 1 304 -5 1558 173 99 185 chr10 89701270 89701691 -55887597 - L1MC4 LINE L1 -451 5649 5835 252 0 0 0 chr10 89701691 89701719 -55887569 + (CA)n Simple_repeat Simple_repeat 2 29 0 1558 173 99 185 chr10 89701719 89702296 -55886992 - L1MC4 LINE L1 -264 5836 5211 264 237 17 0 chr10 89702308 89702367 -55886921 - LTR40b LTR ERVL -1 461 402 315 71 0 0 chr10 89702367 89702409 -55886879 + (CA)n Simple_repeat Simple_repeat 1 42 0 209 182 0 68 chr10 89702411 89702499 -55886789 + (TA)n Simple_repeat Simple_repeat 2 83 0 233 196 0 0 chr10 89702499 89702545 -55886743 - L1MC/D LINE L1 -646 5713 5668 315 110 0 60 chr10 89702566 89702666 -55886622 + (TA)n Simple_repeat Simple_repeat 1 94 0 229 174 22 0 chr10 89702864 89702910 -55886378 - LTR40a LTR ERVL -377 142 96 1624 214 79 62 chr10 89702982 89703084 -55886204 - L1MC4 LINE L1 -875 5205 5106 2361 83 0 7 chr10 89703084 89703386 -55885902 - AluY SINE Alu -11 300 1 1624 214 79 62 chr10 89703386 89704004 -55885284 - L1MC4 LINE L1 -974 5106 4473 1143 211 34 75 chr10 89704010 89704304 -55884984 + AluJo SINE Alu 1 282 -30 30 0 0 0 chr10 89704304 89704334 -55884954 + AT_rich Low_complexity Low_complexity 1 30 0 3741 266 82 28 chr10 89704341 89706337 -55882951 - L1MC4 LINE L1 -1601 4479 2376 270 232 37 0 chr10 89706325 89706407 -55882881 + L1MC4 LINE L1 6617 6701 -1341 * 366 129 0 0 chr10 89706415 89706477 -55882811 + (TA)n Simple_repeat Simple_repeat 2 63 0 981 284 54 38 chr10 89706477 89707581 -55881707 - L1MC4 LINE L1 -3692 2388 1316 228 263 70 76 chr10 89707648 89707819 -55881469 - L1MC4 LINE L1 -5447 636 467 318 279 123 28 chr10 89707920 89708099 -55881189 - L1MC4 LINE L1 -5621 449 254 23 0 0 0 chr10 89708295 89708318 -55880970 + AT_rich Low_complexity Low_complexity 1 23 0 258 230 66 53 chr10 89708861 89709013 -55880275 + HAL1b LINE L1 640 793 -555 204 307 13 0 chr10 89709092 89709167 -55880121 + (CATATA)n Simple_repeat Simple_repeat 2 77 0 2209 114 0 3 chr10 89710830 89711128 -55878160 - AluSx SINE Alu -15 297 1 1151 180 13 25 chr10 89711384 89711623 -55877665 - MER46A DNA MER2_type 0 236 1 187 253 126 53 chr10 89711840 89711935 -55877353 - MIR SINE MIR -121 141 40 216 167 0 0 chr10 89712986 89713034 -55876254 + (TAG)n Simple_repeat Simple_repeat 1 48 0 399 252 39 31 chr10 89713306 89713433 -55875855 + L2 LINE L2 3185 3312 -1 257 328 92 29 chr10 89713672 89713846 -55875442 - MIR SINE MIR 0 262 78 387 0 0 0 chr10 89713857 89713900 -55875388 + (TG)n Simple_repeat Simple_repeat 2 44 0 475 355 37 12 chr10 89714021 89714266 -55875022 - MIR SINE MIR -2 260 10 1502 299 174 13 chr10 89714300 89715255 -55874033 - L2 LINE L2 -45 3268 2150 727 362 91 42 chr10 89715419 89716226 -55873062 - L3 LINE CR1 -473 1104 259 1854 175 3 3 chr10 89716282 89716590 -55872698 + AluJo SINE Alu 1 308 -4 720 245 96 19 chr10 89717477 89717685 -55871603 - MIR SINE MIR -30 232 9 1458 204 31 3 chr10 89717843 89718167 -55871121 + L1MD3 LINE L1 7663 7995 0 1679 212 31 0 chr10 89718306 89718660 -55870628 - L1MB8 LINE L1 -176 6002 5638 227 273 290 16 chr10 89722195 89722378 -55866910 + MIR SINE MIR 30 262 0 811 167 29 61 chr10 89723337 89723582 -55865706 - L1MA7 LINE L1 0 6291 6055 452 349 36 16 chr10 89723726 89723918 -55865370 - MIR SINE MIR -54 208 13 1682 165 30 8 chr10 89725953 89726249 -55863039 - AluJo SINE Alu 0 312 11 621 211 60 24 chr10 89726333 89726499 -55862789 + MIR SINE MIR 74 245 -17 358 257 55 9 chr10 89728064 89728173 -55861115 - MER5B DNA MER1_type -1 177 64 247 266 0 0 chr10 89728574 89728638 -55860650 + MIR SINE MIR 88 151 -111 1926 81 32 7 chr10 89728783 89729066 -55860222 + L1PA8 LINE L1 5881 6170 -2 198 71 0 0 chr10 89729571 89729599 -55859689 + (TG)n Simple_repeat Simple_repeat 2 29 0 334 337 56 31 chr10 89729895 89730091 -55859197 + L2 LINE L2 2208 2408 -906 379 241 36 9 chr10 89730316 89730428 -55858860 + MER94 DNA DNA 4 118 -16 26 64 0 0 chr10 89730572 89730619 -55858669 + AT_rich Low_complexity Low_complexity 1 47 0 199 297 10 50 chr10 89730987 89731088 -55858200 + MIR SINE MIR 104 200 -62 405 335 57 11 chr10 89732266 89732442 -55856846 - MIR3 SINE MIR -9 199 16 2098 105 3 3 chr10 89733249 89733534 -55855754 - AluSx SINE Alu -25 287 3 2418 108 5 70 chr10 89733733 89733916 -55855372 - L1MA3 LINE L1 -1 7723 7530 1808 128 60 0 chr10 89733916 89734181 -55855107 - AluSx SINE Alu -28 284 4 2418 108 5 70 chr10 89734181 89734441 -55854847 - L1MA3 LINE L1 -194 7530 7309 11297 162 35 7 chr10 89734519 89734555 -55854733 - L1MA3 LINE L1 -512 7212 7178 1583 45 0 20 chr10 89734555 89734757 -55854531 - L1PA5 LINE L1 -8 6146 5949 11297 162 35 7 chr10 89734757 89736770 -55852518 - L1MA3 LINE L1 -546 7178 5058 906 5 0 81 chr10 89736770 89736956 -55852332 + (TA)n Simple_repeat Simple_repeat 2 172 0 11297 162 35 7 chr10 89736956 89737653 -55851635 - L1MA3 LINE L1 -2666 5058 4382 6247 93 11 1 chr10 89737672 89739181 -55850107 - L1PA14 LINE L1 -9 6152 4639 43 47 0 0 chr10 89739183 89739247 -55850041 + AT_rich Low_complexity Low_complexity 1 64 0 2108 114 13 10 chr10 89739248 89739546 -55849742 + AluSx SINE Alu 1 299 -13 8548 170 47 29 chr10 89739573 89741554 -55847734 - L1MA3 LINE L1 -4741 2824 14 189 333 0 15 chr10 89742130 89742196 -55847092 - L2 LINE L2 -11 3302 3238 1960 184 35 27 chr10 89742917 89743468 -55845820 - MLT2A2 LTR ERVL 0 554 1 874 209 12 0 chr10 89744997 89745160 -55844128 + FRAM SINE Alu 1 165 -1 264 224 0 0 chr10 89745378 89745445 -55843843 + (TA)n Simple_repeat Simple_repeat 2 68 0 1621 139 56 56 chr10 89747178 89747480 -55841808 - AluJo SINE Alu -10 302 1 1979 179 0 0 chr10 89748159 89748471 -55840817 + AluJb SINE Alu 1 312 0 390 292 60 60 chr10 89749080 89749313 -55839975 + MIR SINE MIR 9 241 -21 389 242 200 0 chr10 89751602 89751722 -55837566 - MIR SINE MIR -70 192 49 861 99 8 0 chr10 89752631 89752752 -55836536 + FLAM_C SINE Alu 4 125 -8 559 256 105 6 chr10 89752968 89753140 -55836148 - MER5A DNA MER1_type 0 189 1 187 283 10 61 chr10 89753193 89753292 -55835996 - L3b LINE CR1 -356 1227 1134 264 30 0 0 chr10 89753462 89753495 -55835793 + (TTTTTG)n Simple_repeat Simple_repeat 4 36 0 22 35 0 0 chr10 89753511 89753540 -55835748 + AT_rich Low_complexity Low_complexity 1 29 0 222 136 0 0 chr10 89754939 89754983 -55834305 + (A)n Simple_repeat Simple_repeat 1 44 0 472 340 68 13 chr10 89756199 89756434 -55832854 + MIR SINE MIR 7 254 -8 1054 225 14 0 chr10 89756438 89756656 -55832632 - MER58A DNA MER1_type 0 224 4 345 267 19 29 chr10 89756812 89756917 -55832371 - MIR SINE MIR -86 122 19 224 321 68 37 chr10 89756952 89757130 -55832158 + MIR SINE MIR 33 216 -46 221 250 0 0 chr10 89757154 89757198 -55832090 + polypyrimidine Low_complexity Low_complexity 1 44 0 414 155 31 10 chr10 89757208 89757305 -55831983 + CT-rich Low_complexity Low_complexity 4 102 0 6079 169 32 15 chr10 89757313 89757811 -55831477 - L1MA7 LINE L1 0 6291 5803 297 0 0 0 chr10 89757811 89757844 -55831444 + (TG)n Simple_repeat Simple_repeat 2 34 0 6079 169 32 15 chr10 89757844 89759436 -55829852 - L1MA7 LINE L1 -488 5803 4161 23 0 0 0 chr10 89760119 89760142 -55829146 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr10 89760380 89760403 -55828885 + AT_rich Low_complexity Low_complexity 1 23 0 230 352 37 9 chr10 89760695 89760803 -55828485 + MIR SINE MIR 31 141 -121 206 283 0 0 chr10 89762807 89762867 -55826421 + (TG)n Simple_repeat Simple_repeat 2 61 0 221 349 83 80 chr10 89763700 89764136 -55825152 + L2 LINE L2 2826 3262 -10 196 247 14 41 chr10 89764359 89764432 -55824856 - L2 LINE L2 -211 3061 2991 370 122 0 0 chr10 89764896 89764978 -55824310 - Alu SINE Alu 0 315 234 491 311 91 29 chr10 89765423 89765664 -55823624 - L2 LINE L2 -865 2449 2194 191 280 0 0 chr10 89765947 89765997 -55823291 - MIR SINE MIR -61 147 98 411 298 108 57 chr10 89768068 89768328 -55820960 - L2 LINE L2 -353 2961 2716 2080 122 14 0 chr10 89768328 89768622 -55820666 - AluSx SINE Alu -13 299 2 2077 102 14 50 chr10 89768626 89768990 -55820298 - L1MA4A LINE L1 -4 6299 5949 411 298 108 57 chr10 89768990 89769113 -55820175 - L2 LINE L2 -600 2714 2553 218 283 245 31 chr10 89769124 89769283 -55820005 - L2 LINE L2 -884 2430 2238 269 172 91 34 chr10 89769493 89769586 -55819702 - L1MC/D LINE L1 -321 5800 5712 21 36 0 0 chr10 89769666 89769694 -55819594 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr10 89770017 89770047 -55819241 + AT_rich Low_complexity Low_complexity 1 30 0 1665 261 43 55 chr10 89770330 89770438 -55818850 - L1MCa LINE L1 -4039 2387 2279 2266 80 14 0 chr10 89770438 89770725 -55818563 - AluSp SINE Alu -22 291 1 1665 261 43 55 chr10 89770725 89771501 -55817787 - L1MCa LINE L1 -4147 2279 1407 798 239 38 8 chr10 89771524 89771788 -55817500 - L1MCa LINE L1 -5512 1095 824 666 240 90 5 chr10 89771897 89772097 -55817191 + MER97a DNA MER1_type? 202 418 -476 1028 306 56 74 chr10 89772565 89773487 -55815801 - HAL1 LINE L1 -1589 918 13 35 0 0 0 chr10 89773897 89773932 -55815356 + AT_rich Low_complexity Low_complexity 1 35 0 383 252 244 8 chr10 89774923 89775054 -55814234 + MIR SINE MIR 47 208 -54 450 65 0 0 chr10 89775062 89775124 -55814164 + (TA)n Simple_repeat Simple_repeat 1 62 0 736 301 103 42 chr10 89775961 89776409 -55812879 - MLT1J LTR MaLR -12 499 25 366 23 0 0 chr10 89778079 89778122 -55811166 + (CA)n Simple_repeat Simple_repeat 2 44 0 269 360 47 0 chr10 89780076 89780162 -55809126 + L2 LINE L2 3122 3211 -61 297 336 43 0 chr10 89780274 89780390 -55808898 - MIR SINE MIR -56 206 86 305 271 98 8 chr10 89780477 89780599 -55808689 + MER103 DNA DNA 21 153 -13 363 23 0 0 chr10 89781295 89781339 -55807949 + (CA)n Simple_repeat Simple_repeat 2 45 0 413 253 195 11 chr10 89781393 89781567 -55807721 + MIR SINE MIR 53 258 -4 22 0 0 0 chr10 89781789 89781811 -55807477 + AT_rich Low_complexity Low_complexity 1 22 0 888 219 10 10 chr10 89782004 89782196 -55807092 - AluJo SINE Alu -22 290 99 259 219 146 0 chr10 89782204 89782300 -55806988 + L1 LINE L1 3370 3479 -2667 624 170 0 0 chr10 89782309 89782409 -55806879 - AluJo SINE Alu -212 100 1 548 154 74 17 chr10 89782414 89782589 -55806699 - Charlie1 DNA MER1_type -47 2714 2530 11652 219 46 31 chr10 89782636 89787947 -55801341 - L1MB1 LINE L1 -1 6403 1029 21 0 0 0 chr10 89788017 89788038 -55801250 + AT_rich Low_complexity Low_complexity 1 21 0 989 192 106 0 chr10 89788058 89788256 -55801032 + MER20 DNA MER1_type 1 219 0 723 231 17 6 chr10 89788516 89788686 -55800602 + Charlie1a DNA MER1_type 1 187 -1268 280 200 0 50 chr10 89788729 89788789 -55800499 - MLT1J LTR MaLR -315 196 140 262 290 0 0 chr10 89790990 89791059 -55798229 - MIR3 SINE MIR -34 174 106 25 31 0 0 chr10 89791521 89791553 -55797735 + AT_rich Low_complexity Low_complexity 1 32 0 4043 149 19 4 chr10 89792308 89793173 -55796115 + L1MA1 LINE L1 4562 5444 -743 1107 123 24 9 chr10 89793167 89793378 -55795910 + L1MA1 LINE L1 5967 6180 -122 * 23 54 0 0 chr10 89793400 89793437 -55795851 + AT_rich Low_complexity Low_complexity 1 37 0 783 145 27 7 chr10 89793501 89793649 -55795639 - L1MA2 LINE L1 -135 6033 5887 1869 146 3 34 chr10 89793792 89793927 -55795361 + AluSx SINE Alu 1 139 -173 2056 114 0 0 chr10 89793927 89794200 -55795088 + AluSg SINE Alu 1 273 -37 185 0 40 0 chr10 89794207 89794232 -55795056 + (TAAA)n Simple_repeat Simple_repeat 4 29 0 1869 146 3 34 chr10 89794232 89794409 -55794879 + AluSx SINE Alu 145 311 -1 389 325 86 0 chr10 89794497 89794660 -55794628 + MIR SINE MIR 60 236 -26 209 266 12 0 chr10 89795038 89795093 -55794195 + MIR SINE MIR 64 122 -86 500 326 96 15 chr10 89795168 89795502 -55793786 - MLT1L LTR MaLR -102 513 153 190 296 31 80 chr10 89795571 89795733 -55793555 + MIR SINE MIR 44 197 -65 254 253 213 0 chr10 89797084 89797159 -55792129 - L2 LINE L2 0 3272 3182 1823 330 134 20 chr10 89797394 89797555 -55791733 - L2 LINE L2 -444 2870 2729 2068 148 0 0 chr10 89797555 89797858 -55791430 - AluSx SINE Alu -9 303 1 1823 330 134 20 chr10 89797858 89798980 -55790308 - L2 LINE L2 -585 2729 1441 286 283 40 96 chr10 89799299 89799476 -55789812 + L2 LINE L2 2915 3081 -191 1495 233 64 54 chr10 89799999 89800497 -55788791 + MLT1D LTR MaLR 1 503 -2 216 352 40 16 chr10 89800840 89800965 -55788323 + MIR SINE MIR 19 146 -62 21 0 0 0 chr10 89801042 89801063 -55788225 + AT_rich Low_complexity Low_complexity 1 21 0 189 0 0 0 chr10 89801149 89801170 -55788118 + (TGAG)n Simple_repeat Simple_repeat 3 23 0 226 313 188 0 chr10 89801560 89801656 -55787632 + L2 LINE L2 3144 3257 -15 212 0 0 35 chr10 89802707 89802736 -55786552 + (TTTTG)n Simple_repeat Simple_repeat 4 31 0 204 125 0 0 chr10 89803024 89803056 -55786232 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 2317 95 0 0 chr10 89803132 89803426 -55785862 + AluSg SINE Alu 1 294 -16 1197 142 0 16 chr10 89803427 89803617 -55785671 + AluSg/x SINE Alu 124 310 0 390 42 0 0 chr10 89804283 89804331 -55784957 + (TG)n Simple_repeat Simple_repeat 2 49 0 252 210 161 0 chr10 89804409 89804471 -55784817 + MIR SINE MIR 117 188 -74 427 225 0 0 chr10 89804481 89804561 -55784727 - L2 LINE L2 -9 3304 3225 2253 90 3 7 chr10 89805327 89805628 -55783660 + AluSg SINE Alu 1 300 -10 312 318 56 28 chr10 89806464 89806618 -55782670 - MIR SINE MIR -64 144 5 293 389 60 19 chr10 89807451 89807667 -55781621 - L2 LINE L2 -549 2765 2541 22 0 0 0 chr10 89808064 89808086 -55781202 + AT_rich Low_complexity Low_complexity 1 22 0 337 280 19 37 chr10 89808622 89808729 -55780559 - MLT1J2 LTR MaLR -3 447 343 746 322 96 30 chr10 89808737 89809196 -55780092 + LTR33 LTR ERVL 26 514 -7 254 340 29 10 chr10 89811281 89811384 -55777904 - MIR SINE MIR -66 196 92 219 302 35 23 chr10 89811482 89811568 -55777720 + L3 LINE CR1 1488 1574 -3 585 311 21 0 chr10 89811765 89811955 -55777333 + MIR SINE MIR 69 262 0 2134 134 21 16 chr10 89811982 89812355 -55776933 - THE1C LTR MaLR 0 375 1 303 335 57 6 chr10 89812379 89812537 -55776751 - MIR SINE MIR 0 262 97 345 281 8 62 chr10 89816399 89816527 -55772761 + MIR SINE MIR 24 144 -64 371 162 81 0 chr10 89816537 89816611 -55772677 + MER116 DNA Mariner 1 80 0 247 176 20 0 chr10 89817283 89817334 -55771954 - Charlie7 DNA MER1_type -2511 101 50 1567 166 76 26 chr10 89817658 89818002 -55771286 + MER46B DNA MER2_type 1 236 0 197 273 45 15 chr10 89818063 89818129 -55771159 + L2 LINE L2 3227 3294 -19 21 0 0 0 chr10 89818143 89818164 -55771124 + AT_rich Low_complexity Low_complexity 1 21 0 465 320 84 42 chr10 89818248 89818676 -55770612 - MLT1L LTR MaLR -74 541 96 1555 164 21 38 chr10 89818890 89819177 -55770111 - AluJo SINE Alu -30 282 1 27 49 0 0 chr10 89819700 89819741 -55769547 + AT_rich Low_complexity Low_complexity 1 41 0 2207 98 3 25 chr10 89820364 89820679 -55768609 - AluSq SINE Alu -5 308 1 243 61 0 0 chr10 89820861 89820894 -55768394 + (TG)n Simple_repeat Simple_repeat 2 34 0 2604 55 0 3 chr10 89821100 89821411 -55767877 + AluY SINE Alu 1 310 -1 927 213 71 3 chr10 89821470 89821793 -55767495 + MLT1E1 LTR MaLR 1 433 -191 182 91 30 0 chr10 89821850 89821883 -55767405 + GA-rich Low_complexity Low_complexity 2 35 0 916 254 107 22 chr10 89822063 89822465 -55766823 + L1MC/D LINE L1 5315 5750 -2058 2298 75 0 0 chr10 89822502 89822806 -55766482 - AluSg1 SINE Alu 0 305 2 198 0 0 0 chr10 89823036 89823058 -55766230 + (TG)n Simple_repeat Simple_repeat 2 23 0 372 250 110 29 chr10 89823952 89824088 -55765200 + MER3 DNA MER1_type 7 153 -56 282 167 0 0 chr10 89824680 89824740 -55764548 + (TA)n Simple_repeat Simple_repeat 1 60 0 250 260 156 0 chr10 89824936 89825013 -55764275 + L2 LINE L2 3225 3313 0 610 193 0 83 chr10 89825408 89825553 -55763735 - FLAM_A SINE Alu 0 133 1 364 278 24 44 chr10 89826017 89826222 -55763066 - L1MC5 LINE L1 -54 7907 7707 747 261 6 0 chr10 89826636 89826812 -55762476 - MER58A DNA MER1_type 0 224 48 763 243 44 15 chr10 89826931 89827137 -55762151 + MIR SINE MIR 11 222 -40 566 130 0 10 chr10 89828091 89828191 -55761097 + (TTCC)n Simple_repeat Simple_repeat 4 102 0 250 146 0 0 chr10 89828192 89828233 -55761055 + (TC)n Simple_repeat Simple_repeat 1 41 0 1655 197 7 10 chr10 89828233 89828533 -55760755 - AluJo SINE Alu -11 301 3 25 65 0 0 chr10 89828656 89828702 -55760586 + AT_rich Low_complexity Low_complexity 1 46 0 3105 159 5 18 chr10 89829041 89829613 -55759675 + L1PA16 LINE L1 5586 6150 -16 1383 159 4 0 chr10 89829617 89829875 -55759413 + L1MA4A LINE L1 6043 6301 -2 349 359 99 53 chr10 89830160 89830572 -55758716 + L2 LINE L2 2842 3272 0 339 25 0 0 chr10 89831920 89831960 -55757328 + (CA)n Simple_repeat Simple_repeat 2 41 0 228 67 0 0 chr10 89833410 89833440 -55755848 + (T)n Simple_repeat Simple_repeat 1 30 0 1645 50 87 0 chr10 89833450 89833669 -55755619 - AluY SINE Alu -73 238 1 401 327 19 6 chr10 89834985 89835141 -55754147 + L3 LINE CR1 1413 1570 -7 238 226 143 83 chr10 89835941 89836074 -55753214 + MER103 DNA DNA 22 162 -4 425 278 58 34 chr10 89836905 89837200 -55752088 + L1ME4a LINE L1 5584 5885 -236 235 226 0 0 chr10 89838120 89838182 -55751106 + A-rich Low_complexity Low_complexity 1 62 0 670 122 0 9 chr10 89839095 89839202 -55750086 + L1MA5A LINE L1 6187 6292 -5 21 0 0 0 chr10 89839203 89839224 -55750064 + AT_rich Low_complexity Low_complexity 1 21 0 1261 191 94 43 chr10 89839472 89839843 -55749445 + MLT1B LTR MaLR 1 390 0 259 250 0 0 chr10 89840798 89840858 -55748430 + L1MEc LINE L1 135 194 -6202 * 1692 264 75 55 chr10 89840856 89841707 -55747581 + L1MEc LINE L1 1034 1912 -4484 228 35 0 0 chr10 89841707 89841736 -55747552 + (TATATG)n Simple_repeat Simple_repeat 2 30 0 1692 264 75 55 chr10 89841736 89841949 -55747339 + L1MEc LINE L1 1912 2119 -4277 632 241 28 8 chr10 89841953 89842170 -55747118 + L1MEc LINE L1 2245 2467 -3748 1200 182 0 34 chr10 89842170 89842406 -55746882 + AluJo SINE Alu 84 311 -1 3361 246 43 39 chr10 89842413 89843412 -55745876 + L1MEc LINE L1 2462 3470 -2745 2180 108 0 0 chr10 89843412 89843708 -55745580 + AluSq SINE Alu 1 296 -17 3361 246 43 39 chr10 89843708 89844136 -55745152 + L1MEc LINE L1 3470 3895 -2320 278 364 30 0 chr10 89846097 89846229 -55743059 + MIR SINE MIR 124 259 -3 1276 172 74 64 chr10 89846243 89846661 -55742627 - LTR1B LTR ERV1 0 826 379 1010 152 38 62 chr10 89846667 89846877 -55742411 - LTR1B LTR ERV1 -621 205 1 326 306 149 8 chr10 89847001 89847135 -55742153 - MIR3 SINE MIR -16 192 40 214 294 186 0 chr10 89848687 89848789 -55740499 - L2 LINE L2 -1 3312 3192 1341 139 50 84 chr10 89849226 89849585 -55739703 + MER4A LTR ERV1 1 347 -317 513 77 243 46 chr10 89849720 89849857 -55739431 + MER4C LTR ERV1 291 655 -9 287 284 102 8 chr10 89850154 89850281 -55739007 - L2 LINE L2 0 3313 3175 196 336 115 19 chr10 89851019 89851123 -55738165 - MIR3 SINE MIR -49 159 46 2045 101 66 0 chr10 89851630 89851916 -55737372 + AluSx SINE Alu 1 305 -7 246 305 154 30 chr10 89851999 89852330 -55736958 + MARNA DNA Mariner 74 445 -141 241 299 83 42 chr10 89852588 89852732 -55736556 - MIR3 SINE MIR -40 168 19 2368 87 0 7 chr10 89852740 89853050 -55736238 - AluY SINE Alu -3 308 1 280 274 34 94 chr10 89853094 89853211 -55736077 + MIR3 SINE MIR 93 202 -6 423 250 116 47 chr10 89853436 89853608 -55735680 - MIR SINE MIR -43 219 36 28 0 0 0 chr10 89854184 89854212 -55735076 + AT_rich Low_complexity Low_complexity 1 28 0 1160 153 0 0 chr10 89854212 89854389 -55734899 - AluSg/x SINE Alu -2 310 134 1851 148 18 3 chr10 89854389 89854673 -55734615 - AluSx SINE Alu -15 297 10 351 298 119 36 chr10 89855470 89855638 -55733650 - MIR SINE MIR -4 258 77 668 269 24 53 chr10 89855724 89855932 -55733356 + MIR SINE MIR 56 257 -5 184 122 49 0 chr10 89856751 89856792 -55732496 + GA-rich Low_complexity Low_complexity 1 43 0 196 276 122 68 chr10 89857430 89857651 -55731637 - L2 LINE L2 -612 2702 2470 1119 153 0 12 chr10 89859188 89859358 -55729930 + AluSx SINE Alu 1 168 -144 207 69 0 0 chr10 89859391 89859420 -55729868 + (CAAT)n Simple_repeat Simple_repeat 4 32 0 21 57 0 0 chr10 89859520 89859555 -55729733 + AT_rich Low_complexity Low_complexity 1 35 0 267 56 0 0 chr10 89859848 89859884 -55729404 - MADE1 DNA Mariner -44 36 1 2595 51 3 6 chr10 89860843 89861155 -55728133 - AluY SINE Alu 0 311 1 21 0 0 0 chr10 89861234 89861255 -55728033 + AT_rich Low_complexity Low_complexity 1 21 0 470 311 42 28 chr10 89861281 89861705 -55727583 + L1M4 LINE L1 3695 4124 -2022 504 314 109 0 chr10 89862281 89862510 -55726778 + L2 LINE L2 2313 2566 -748 225 159 0 0 chr10 89863276 89863320 -55725968 + (TG)n Simple_repeat Simple_repeat 1 44 0 221 368 0 0 chr10 89863326 89863394 -55725894 + L2 LINE L2 3201 3268 -4 2385 60 0 13 chr10 89864311 89864612 -55724676 + AluY SINE Alu 1 297 -14 225 350 60 104 chr10 89864809 89865195 -55724093 + L2 LINE L2 2904 3272 0 40974 33 22 1 chr10 89865419 89871443 -55717845 + L1PA2 LINE L1 5 6155 0 1847 191 39 7 chr10 89871859 89872324 -55716964 - L1 LINE L1 -1401 4745 4266 417 172 0 21 chr10 89872304 89872397 -55716891 - L1P5 LINE L1 -1310 4836 4746 * 3070 171 12 15 chr10 89872388 89873387 -55715901 + L1P5 LINE L1 4808 5802 -354 340 127 48 0 chr10 89873523 89873586 -55715702 + L1PB4 LINE L1 4746 4811 -1335 1463 152 16 63 chr10 89873586 89873901 -55715387 + L1PB4 LINE L1 5853 6153 -3 184 364 13 0 chr10 89874010 89874087 -55715201 - MIR SINE MIR -76 186 109 1668 80 50 0 chr10 89874367 89874629 -55714659 - L1MA2 LINE L1 0 6304 6030 697 132 9 0 chr10 89874629 89874735 -55714553 - U6 snRNA snRNA 0 107 1 181 219 49 0 chr10 89875796 89875837 -55713451 + L2 LINE L2 2309 2351 -963 26 30 0 0 chr10 89875838 89875871 -55713417 + AT_rich Low_complexity Low_complexity 1 33 0 1950 130 58 19 chr10 89875886 89876247 -55713041 + THE1C LTR MaLR 1 375 0 2638 202 74 0 chr10 89877718 89878342 -55710946 + L1MB7 LINE L1 5333 6002 -182 1474 127 23 0 chr10 89878769 89878990 -55710298 + AluSg/x SINE Alu 87 312 0 835 250 48 0 chr10 89879389 89879597 -55709691 + MER58A DNA MER1_type 7 224 0 188 333 14 28 chr10 89879757 89879829 -55709459 + MIR SINE MIR 41 111 -151 681 159 7 36 chr10 89879829 89879967 -55709321 - FRAM SINE Alu -2 174 41 303 242 0 0 chr10 89879977 89880039 -55709249 + MIR SINE MIR 102 163 -99 326 275 85 54 chr10 89880039 89880297 -55708991 - MLT1L LTR MaLR -2 613 348 595 239 71 51 chr10 89882684 89882881 -55706407 - MER20 DNA MER1_type -1 218 18 974 216 116 24 chr10 89884257 89884507 -55704781 + AluJo SINE Alu 21 293 -19 194 313 172 0 chr10 89885745 89885809 -55703479 - L2 LINE L2 -61 3211 3137 411 21 0 0 chr10 89887151 89887199 -55702089 + (CA)n Simple_repeat Simple_repeat 2 49 0 332 287 87 9 chr10 89887621 89887736 -55701552 + L2 LINE L2 3168 3291 -22 282 357 63 0 chr10 89887783 89887909 -55701379 + L2 LINE L2 3138 3271 -1 228 149 45 30 chr10 89888247 89888314 -55700974 + L1M4 LINE L1 3885 3952 -2194 36 62 0 0 chr10 89888464 89888528 -55700760 + AT_rich Low_complexity Low_complexity 1 64 0 264 339 46 15 chr10 89889966 89890096 -55699192 + MIR SINE MIR 51 184 -78 445 286 66 44 chr10 89890113 89890295 -55698993 - MIR SINE MIR -1 261 76 194 0 39 0 chr10 89890896 89890922 -55698366 + (TTA)n Simple_repeat Simple_repeat 2 28 0 21 36 0 0 chr10 89891665 89891693 -55697595 + AT_rich Low_complexity Low_complexity 1 28 0 2116 118 90 6 chr10 89892978 89893324 -55695964 - THE1C LTR MaLR 0 375 1 370 266 0 0 chr10 89893730 89893809 -55695479 + MER2 DNA MER2_type 1 79 -266 515 292 83 37 chr10 89893900 89894355 -55694933 + HAL1b LINE L1 406 881 -467 2129 109 3 22 chr10 89894569 89894880 -55694408 + AluSq SINE Alu 1 305 -8 190 336 88 44 chr10 89895613 89895750 -55693538 - L2 LINE L2 -60 3212 3070 1068 241 95 37 chr10 89896210 89896591 -55692697 - MER74B LTR ERVL -56 566 152 2243 79 0 3 chr10 89896591 89896904 -55692384 + AluY SINE Alu 1 311 0 1068 241 95 37 chr10 89896904 89896987 -55692301 - MER74B LTR ERVL -470 152 75 575 268 127 103 chr10 89897022 89897772 -55691516 + L2 LINE L2 2144 2911 -403 257 292 60 114 chr10 89897811 89898109 -55691179 + L2 LINE L2 3030 3311 -2 734 279 9 18 chr10 89898624 89898850 -55690438 + MER58A DNA MER1_type 1 224 0 438 101 0 0 chr10 89899475 89899544 -55689744 + (CA)n Simple_repeat Simple_repeat 1 69 0 382 327 60 30 chr10 89899630 89899829 -55689459 + MIR SINE MIR 52 256 -6 255 362 81 22 chr10 89900070 89900219 -55689069 + L2 LINE L2 2525 2664 -650 2482 76 0 0 chr10 89900219 89900523 -55688765 - AluY SINE Alu -7 304 1 255 362 81 22 chr10 89900523 89900644 -55688644 + L2 LINE L2 2664 2811 -503 181 341 119 32 chr10 89900982 89901034 -55688254 + L2 LINE L2 3136 3182 -90 225 0 0 0 chr10 89901034 89901059 -55688229 + (TTCA)n Simple_repeat Simple_repeat 4 28 0 181 341 119 32 chr10 89901059 89901132 -55688156 + L2 LINE L2 3182 3272 0 410 295 108 12 chr10 89901871 89902037 -55687251 - MIR SINE MIR -61 201 20 193 29 59 0 chr10 89902421 89902455 -55686833 + (TA)n Simple_repeat Simple_repeat 1 36 0 313 324 94 6 chr10 89902472 89902642 -55686646 - L1M4 LINE L1 -1059 5087 4903 279 203 0 0 chr10 89902703 89902762 -55686526 + (TA)n Simple_repeat Simple_repeat 1 59 0 1220 132 0 0 chr10 89902797 89902964 -55686324 - AluSx SINE Alu -145 167 1 329 267 109 46 chr10 89902966 89903330 -55685958 - L1ME LINE L1 -643 5519 4945 241 345 0 45 chr10 89905866 89905976 -55683312 - L2 LINE L2 -16 3297 3193 419 277 112 17 chr10 89906852 89907148 -55682140 + HAL1 LINE L1 1249 1572 -935 292 316 176 7 chr10 89907886 89908022 -55681266 + MIR3 SINE MIR 7 165 -43 3326 122 0 79 chr10 89908122 89908260 -55681028 - MER1A DNA MER1_type -2173 527 380 1929 112 18 4 chr10 89908260 89908538 -55680750 - AluSx SINE Alu -30 282 1 3326 122 0 79 chr10 89908538 89908971 -55680317 - MER1A DNA MER1_type -2320 380 1 231 384 14 41 chr10 89908983 89909129 -55680159 + MIR SINE MIR 5 146 -116 207 0 0 0 chr10 89909487 89909510 -55679778 + (T)n Simple_repeat Simple_repeat 1 23 0 254 305 68 17 chr10 89910288 89910406 -55678882 + MIR SINE MIR 21 144 -118 1293 241 31 8 chr10 89910722 89911075 -55678213 - MLT1A1 LTR MaLR 0 365 5 222 118 0 0 chr10 89911435 89911469 -55677819 + (TAA)n Simple_repeat Simple_repeat 2 35 0 447 317 58 5 chr10 89911975 89912180 -55677108 + MIR SINE MIR 38 253 -9 276 260 77 29 chr10 89912214 89912318 -55676970 + L2 LINE L2 2618 2726 -588 223 296 111 58 chr10 89912618 89912807 -55676481 + L2 LINE L2 3112 3310 -3 22 56 0 0 chr10 89913751 89913787 -55675501 + AT_rich Low_complexity Low_complexity 1 36 0 1962 93 0 12 chr10 89913845 89914103 -55675185 + AluSq SINE Alu 35 289 -24 185 191 0 48 chr10 89914148 89914190 -55675098 + L2 LINE L2 3030 3069 -203 421 269 19 0 chr10 89914506 89914614 -55674674 + Charlie8 DNA MER1_type 75 184 -2233 337 254 18 27 chr10 89915816 89915926 -55673362 + GA-rich Low_complexity Low_complexity 4 112 0 444 305 8 8 chr10 89916294 89916422 -55672866 - MIR SINE MIR -33 229 102 332 294 34 17 chr10 89916423 89916542 -55672746 - MIR SINE MIR -43 219 99 287 360 159 32 chr10 89916790 89917543 -55671745 + L2 LINE L2 524 1372 -1942 298 339 74 47 chr10 89917548 89917911 -55671377 + L2 LINE L2 2576 2948 -366 4458 176 31 62 chr10 89918439 89918629 -55670659 + L1MC3 LINE L1 6687 6881 -904 189 0 0 0 chr10 89918629 89918650 -55670638 + (CA)n Simple_repeat Simple_repeat 2 22 0 4458 176 31 62 chr10 89918650 89919555 -55669733 + L1MC3 LINE L1 6881 7748 -37 2140 126 0 3 chr10 89919555 89919568 -55669720 - AluSx SINE Alu -20 292 280 199 0 65 0 chr10 89919568 89919599 -55669689 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 2140 126 0 3 chr10 89919599 89919878 -55669410 - AluSx SINE Alu -32 280 1 2289 108 0 0 chr10 89919900 89920196 -55669092 - AluSg SINE Alu -14 296 1 26 0 0 0 chr10 89921104 89921130 -55668158 + AT_rich Low_complexity Low_complexity 1 26 0 1981 149 10 0 chr10 89921462 89921758 -55667530 + AluSx SINE Alu 1 299 -13 203 392 48 32 chr10 89921828 89921953 -55667335 + MIR SINE MIR 8 134 -128 187 385 0 0 chr10 89922734 89922812 -55666476 - MIR SINE MIR -73 135 58 1568 205 0 26 chr10 89923620 89923927 -55665361 + AluJo SINE Alu 1 299 -13 227 56 56 0 chr10 89923930 89923966 -55665322 + (TAAA)n Simple_repeat Simple_repeat 4 41 0 2325 148 23 35 chr10 89924857 89925054 -55664234 + MSTB LTR MaLR 1 199 -227 2169 116 24 40 chr10 89925054 89925432 -55663856 + THE1C LTR MaLR 1 372 -3 3170 105 40 8 chr10 89925432 89925927 -55663361 - MER9 LTR ERVK 0 511 1 2325 148 23 35 chr10 89925927 89926159 -55663129 + MSTB LTR MaLR 197 426 0 283 331 63 11 chr10 89926683 89926858 -55662430 - MIR SINE MIR -2 260 77 26 0 0 0 chr10 89927017 89927043 -55662245 + AT_rich Low_complexity Low_complexity 1 26 0 215 103 26 0 chr10 89927577 89927616 -55661672 + (CA)n Simple_repeat Simple_repeat 2 41 0 189 308 51 0 chr10 89927866 89927944 -55661344 - L2 LINE L2 -783 2531 2450 1789 307 261 37 chr10 89928023 89928127 -55661161 - L2 LINE L2 -983 2331 2252 1874 109 77 57 chr10 89928127 89928493 -55660795 - THE1C LTR MaLR 0 375 3 1789 307 261 37 chr10 89928493 89930244 -55659044 - L2 LINE L2 -1062 2252 60 499 274 67 6 chr10 89930919 89931083 -55658205 + MER5B DNA MER1_type 2 175 -3 249 186 0 0 chr10 89932195 89932238 -55657050 - MIR SINE MIR -103 159 117 866 174 56 6 chr10 89933661 89933839 -55655449 - MER5A DNA MER1_type 0 189 3 674 270 71 13 chr10 89933848 89934074 -55655214 + MIR SINE MIR 24 262 0 299 316 46 40 chr10 89934616 89934768 -55654520 + MER117 DNA MER1_type 2 154 -43 486 302 137 6 chr10 89935255 89935437 -55653851 + MIR SINE MIR 57 262 0 588 338 55 35 chr10 89935878 89936245 -55653043 - L2 LINE L2 0 3313 2940 21 107 0 0 chr10 89937378 89937462 -55651826 + AT_rich Low_complexity Low_complexity 1 84 0 23 0 0 0 chr10 89938100 89938123 -55651165 + AT_rich Low_complexity Low_complexity 1 23 0 27 29 0 0 chr10 89938677 89938711 -55650577 + AT_rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr10 89941146 89941167 -55648121 + AT_rich Low_complexity Low_complexity 1 21 0 243 340 73 89 chr10 89942821 89943136 -55646152 + L2 LINE L2 2951 3260 -12 387 0 0 0 chr10 89946247 89946290 -55642998 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 771 266 26 0 chr10 89946483 89946675 -55642613 + MIR SINE MIR 4 200 -62 188 240 93 40 chr10 89946803 89946878 -55642410 - MER5B DNA MER1_type -71 107 29 263 274 0 14 chr10 89950322 89950395 -55638893 + (TG)n Simple_repeat Simple_repeat 2 73 0 2252 93 0 0 chr10 89950568 89950881 -55638407 - AluSg SINE Alu 0 315 3 2230 152 62 0 chr10 89951088 89951490 -55637798 + MSTA LTR MaLR 1 427 -1 472 296 107 0 chr10 89952216 89952385 -55636903 - MIR SINE MIR -14 248 62 307 261 84 0 chr10 89952536 89952684 -55636604 - L2 LINE L2 -1 3312 3187 2350 56 3 33 chr10 89954637 89954941 -55634347 - AluY SINE Alu -16 295 1 207 69 0 0 chr10 89954966 89954995 -55634293 + (CA)n Simple_repeat Simple_repeat 2 30 0 3667 238 50 30 chr10 89955105 89955154 -55634134 + L1MD1 LINE L1 4264 4311 -1931 192 77 0 0 chr10 89955154 89955180 -55634108 + (CA)n Simple_repeat Simple_repeat 2 27 0 3667 238 50 30 chr10 89955180 89957064 -55632224 + L1MD1 LINE L1 4311 6236 -6 2397 65 0 3 chr10 90007297 90007590 -55581698 - AluY SINE Alu -19 292 1 308 353 67 15 chr10 90007689 90007958 -55581330 - L1M4 LINE L1 -1486 4660 4378 533 310 52 28 chr10 90008020 90008591 -55580697 - L1M4 LINE L1 -1867 4279 3695 21 0 0 0 chr10 90008617 90008638 -55580650 + AT_rich Low_complexity Low_complexity 1 21 0 2595 51 3 6 chr10 90008717 90009029 -55580259 + AluY SINE Alu 1 311 0 267 56 0 0 chr10 90009988 90010024 -55579264 - MADE1 DNA Mariner 0 80 45 21 57 0 0 chr10 90010317 90010352 -55578936 + AT_rich Low_complexity Low_complexity 1 35 0 207 69 0 0 chr10 90010452 90010481 -55578807 + (ATTG)n Simple_repeat Simple_repeat 4 32 0 1055 160 0 18 chr10 90010514 90010683 -55578605 - AluSx SINE Alu -144 168 3 196 276 122 68 chr10 90012253 90012474 -55576814 + L2 LINE L2 2470 2702 -612 184 122 49 0 chr10 90013112 90013153 -55576135 + CT-rich Low_complexity Low_complexity 1 43 0 668 269 24 53 chr10 90013972 90014180 -55575108 - MIR SINE MIR -5 257 56 351 298 119 36 chr10 90014266 90014434 -55574854 + MIR SINE MIR 77 258 -4 1851 148 18 3 chr10 90015231 90015515 -55573773 + AluSx SINE Alu 10 297 -15 1160 153 0 0 chr10 90015515 90015692 -55573596 + AluSg/x SINE Alu 134 310 -2 28 0 0 0 chr10 90015692 90015720 -55573568 + AT_rich Low_complexity Low_complexity 1 28 0 423 250 116 47 chr10 90016296 90016468 -55572820 + MIR SINE MIR 36 219 -43 280 274 34 94 chr10 90016693 90016810 -55572478 - MIR3 SINE MIR -6 202 93 2368 87 0 7 chr10 90016854 90017164 -55572124 + AluY SINE Alu 1 308 -3 241 299 83 42 chr10 90017172 90017316 -55571972 + MIR3 SINE MIR 19 168 -40 246 305 154 30 chr10 90017574 90017905 -55571383 - MARNA DNA Mariner -141 445 74 2045 101 66 0 chr10 90017988 90018274 -55571014 - AluSx SINE Alu -7 305 1 196 336 115 19 chr10 90018781 90018885 -55570403 + MIR3 SINE MIR 46 159 -49 287 284 102 8 chr10 90019623 90019750 -55569538 + L2 LINE L2 3175 3313 0 513 77 243 46 chr10 90020047 90020184 -55569104 - MER4C LTR ERV1 -9 655 291 1341 139 50 84 chr10 90020319 90020678 -55568610 - MER4A LTR ERV1 -317 347 1 214 294 186 0 chr10 90021115 90021217 -55568071 + L2 LINE L2 3192 3312 -1 326 306 149 8 chr10 90022769 90022903 -55566385 + MIR3 SINE MIR 40 192 -16 1010 152 38 62 chr10 90023027 90023237 -55566051 + LTR1B LTR ERV1 1 205 -621 1276 172 74 64 chr10 90023243 90023661 -55565627 + LTR1B LTR ERV1 379 826 0 278 364 30 0 chr10 90023675 90023807 -55565481 - MIR SINE MIR -3 259 124 3040 244 50 41 chr10 90025768 90026189 -55563099 - L1MDa LINE L1 -2320 3895 3479 2202 112 0 0 chr10 90026189 90026492 -55562796 - AluSq SINE Alu -10 303 1 3040 244 50 41 chr10 90026492 90027491 -55561797 - L1MDa LINE L1 -2736 3479 2462 1225 182 0 34 chr10 90027498 90027734 -55561554 - AluJo SINE Alu -1 311 84 592 233 26 5 chr10 90027736 90027951 -55561337 - L1MDa LINE L1 -3750 2471 2245 1448 265 75 55 chr10 90027955 90028168 -55561120 - L1MDa LINE L1 -4277 2119 1912 228 35 0 0 chr10 90028168 90028197 -55561091 + (CATATA)n Simple_repeat Simple_repeat 2 30 0 1448 265 75 55 chr10 90028197 90029048 -55560240 - L1MDa LINE L1 -4484 1912 1034 239 250 0 0 chr10 90029046 90029106 -55560182 - L1MDa LINE L1 -6202 194 135 * 1254 191 94 43 chr10 90030061 90030432 -55558856 - MLT1B LTR MaLR 0 390 1 21 0 0 0 chr10 90030680 90030701 -55558587 + AT_rich Low_complexity Low_complexity 1 21 0 660 122 0 9 chr10 90030702 90030809 -55558479 - L1MA5A LINE L1 -5 6292 6187 235 226 0 0 chr10 90031722 90031784 -55557504 + T-rich Low_complexity Low_complexity 1 62 0 359 278 58 34 chr10 90032704 90032999 -55556289 - L1ME4a LINE L1 -236 5885 5584 412 327 19 6 chr10 90034763 90034919 -55554369 - L3 LINE CR1 -7 1570 1413 1616 50 87 0 chr10 90036235 90036454 -55552834 + AluY SINE Alu 1 238 -73 228 67 0 0 chr10 90036464 90036494 -55552794 + (A)n Simple_repeat Simple_repeat 1 30 0 207 389 0 44 chr10 90036661 90036751 -55552537 - L2 LINE L2 -98 3174 3089 326 275 85 54 chr10 90037536 90037794 -55551494 + MLT1L LTR MaLR 348 613 -2 303 242 0 0 chr10 90037794 90037856 -55551432 - MIR SINE MIR -99 163 102 681 159 7 36 chr10 90037866 90038004 -55551284 + FRAM SINE Alu 41 174 -2 188 333 14 28 chr10 90038004 90038076 -55551212 - MIR SINE MIR -151 111 41 835 250 48 0 chr10 90038236 90038444 -55550844 - MER58A DNA MER1_type 0 224 7 1474 127 23 0 chr10 90038843 90039064 -55550224 - AluSg/x SINE Alu 0 310 85 2638 202 74 0 chr10 90039491 90040115 -55549173 - L1MB7 LINE L1 -182 6002 5333 1950 130 58 19 chr10 90041586 90041947 -55547341 - THE1C LTR MaLR 0 375 1 26 30 0 0 chr10 90041962 90041995 -55547293 + AT_rich Low_complexity Low_complexity 1 33 0 181 219 49 0 chr10 90041996 90042037 -55547251 - L2 LINE L2 -963 2351 2309 697 132 9 0 chr10 90043098 90043204 -55546084 + U6 snRNA snRNA 1 107 0 1668 80 50 0 chr10 90043204 90043466 -55545822 + L1MA2 LINE L1 6030 6304 0 184 364 13 0 chr10 90043746 90043823 -55545465 + MIR SINE MIR 109 186 -76 1463 152 16 63 chr10 90043932 90044248 -55545040 - L1PB4 LINE L1 -3 6153 5853 329 129 48 0 chr10 90044248 90044310 -55544978 - L1PB4 LINE L1 -1336 4810 4746 3070 171 12 15 chr10 90044446 90045445 -55543843 - L1P5 LINE L1 -354 5802 4808 417 172 0 21 chr10 90045436 90045529 -55543759 + L1P5 LINE L1 4746 4836 -1310 * 1847 191 39 7 chr10 90045509 90045974 -55543314 + L1 LINE L1 4266 4745 -1401 6305 33 0 2 chr10 90046390 90047176 -55542112 - L1PA2 LINE L1 0 6155 5372 288 248 229 32 chr10 90047874 90048031 -55541257 - MIR SINE MIR -16 246 59 265 273 132 16 chr10 90048063 90048184 -55541104 - MIR SINE MIR -18 244 110 413 357 0 24 chr10 90048773 90048899 -55540389 + L2 LINE L2 3150 3272 0 272 291 137 33 chr10 90049501 90049683 -55539605 - MIR SINE MIR -54 208 8 2196 131 0 40 chr10 90050758 90051109 -55538179 + MER1B DNA MER1_type 1 337 0 653 178 0 9 chr10 90051670 90051777 -55537511 + Tigger3(Golem) DNA MER2_type 1 106 -2923 585 98 0 22 chr10 90051770 90051862 -55537426 + Tigger3(Golem) DNA MER2_type 2277 2366 -663 * 1377 170 13 87 chr10 90051863 90052174 -55537114 + AluJo SINE Alu 19 306 -6 3118 150 54 23 chr10 90052174 90052394 -55536894 + Tigger3(Golem) DNA MER2_type 2361 2573 -455 2447 56 0 13 chr10 90052394 90052697 -55536591 + AluY SINE Alu 1 299 -12 3118 150 54 23 chr10 90052697 90053123 -55536165 + Tigger3(Golem) DNA MER2_type 2573 3027 -1 587 226 57 57 chr10 90053226 90053403 -55535885 + MIR SINE MIR 16 192 -70 198 244 0 0 chr10 90054235 90054276 -55535012 - L2 LINE L2 -19 3253 3213 250 323 58 13 chr10 90054295 90054396 -55534892 + MIR SINE MIR 15 93 -115 248 256 178 16 chr10 90055136 90055265 -55534023 - MIR SINE MIR -54 208 59 356 271 39 32 chr10 90055323 90055478 -55533810 + MLT1J2 LTR MaLR 47 202 -248 664 316 18 18 chr10 90056991 90057219 -55532069 + MIR SINE MIR 5 232 -30 311 265 10 29 chr10 90058102 90058204 -55531084 + MER103 DNA DNA 26 125 -41 245 304 0 0 chr10 90059455 90059547 -55529741 + (TA)n Simple_repeat Simple_repeat 1 92 0 190 229 67 86 chr10 90059649 90059754 -55529534 - L2 LINE L2 -889 2425 2323 199 322 184 0 chr10 90059809 90059896 -55529392 + L2 LINE L2 3156 3258 -14 807 146 8 0 chr10 90060886 90061009 -55528279 - FLAM_C SINE Alu -9 124 1 3478 112 0 0 chr10 90061517 90062017 -55527271 - L1PA10 LINE L1 -17 6151 5652 227 337 30 10 chr10 90062143 90062244 -55527044 - L2 LINE L2 -185 3087 2985 203 364 73 36 chr10 90062585 90062805 -55526483 - L2 LINE L2 -743 2571 2344 24 0 0 0 chr10 90063796 90063820 -55525468 + AT_rich Low_complexity Low_complexity 1 24 0 2141 136 0 0 chr10 90063909 90064217 -55525071 + AluSx SINE Alu 1 308 -4 286 178 75 60 chr10 90064240 90064411 -55524877 - L1MC5 LINE L1 -766 7195 6970 259 391 14 0 chr10 90064645 90064783 -55524505 + MIR SINE MIR 1 140 -122 23 0 0 0 chr10 90064931 90064954 -55524334 + AT_rich Low_complexity Low_complexity 1 23 0 279 0 0 0 chr10 90065496 90065527 -55523761 + (A)n Simple_repeat Simple_repeat 1 31 0 425 354 80 56 chr10 90065711 90066124 -55523164 + L2 LINE L2 2847 3269 -3 321 308 109 69 chr10 90067762 90068383 -55520905 + L1M4 LINE L1 3042 3687 -2459 334 250 0 0 chr10 90068501 90068581 -55520707 + L1M4 LINE L1 3743 3822 -2324 32 43 0 0 chr10 90068582 90068628 -55520660 + AT_rich Low_complexity Low_complexity 1 46 0 10126 167 9 24 chr10 90069316 90072463 -55516825 + L1PA8A LINE L1 3 3160 -3301 528 105 0 0 chr10 90072464 90072540 -55516748 + Alu SINE Alu 235 310 -2 15671 130 5 19 chr10 90072540 90075837 -55513451 + L1PA8A LINE L1 3142 6446 0 1305 172 90 4 chr10 90075837 90076093 -55513195 + L1MA4 LINE L1 5777 6054 -246 4615 242 41 65 chr10 90076711 90077755 -55511533 + L1MB7 LINE L1 16 1014 -5632 2384 92 0 0 chr10 90077755 90078060 -55511228 + AluY SINE Alu 1 305 -6 4615 242 41 65 chr10 90078060 90078966 -55510322 + L1MB7 LINE L1 1014 1940 -4706 226 305 70 0 chr10 90078972 90079100 -55510188 + L1MB7 LINE L1 2019 2155 -4491 5285 239 33 44 chr10 90079294 90081361 -55507927 + L1MB7 LINE L1 2837 4881 -1763 1695 162 0 60 chr10 90081361 90081714 -55507574 + AluJb SINE Alu 1 335 0 2899 247 53 51 chr10 90081747 90082908 -55506380 + L1MCb LINE L1 7 1170 -4875 * 3884 217 38 16 chr10 90082883 90084675 -55504613 + L1MB7 LINE L1 4777 6602 0 180 0 0 0 chr10 90085658 90085678 -55503610 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 308 279 132 15 chr10 90085891 90086027 -55503261 - MER103 DNA DNA -9 157 6 1462 264 87 11 chr10 90087182 90087735 -55501553 - L1ME1 LINE L1 -28 6138 5544 1347 201 18 14 chr10 90089434 90089713 -55499575 + AluJo SINE Alu 23 302 -10 184 345 92 8 chr10 90090346 90090465 -55498823 + L2 LINE L2 2567 2695 -619 594 322 30 13 chr10 90090550 90090783 -55498505 + MIR SINE MIR 14 250 -12 360 348 101 14 chr10 90091311 90091536 -55497752 - MIR SINE MIR -7 255 12 1676 179 19 79 chr10 90093208 90093626 -55495662 + MLT2C1 LTR ERVL 5 397 0 14464 138 19 12 chr10 90093667 90096066 -55493222 + Tigger1 DNA MER2_type 2 2417 -1 184 342 112 33 chr10 90096503 90096655 -55492633 - L2 LINE L2 -1 3271 3108 294 205 26 39 chr10 90096985 90097063 -55492225 + CT-rich Low_complexity Low_complexity 3 79 0 1159 138 6 0 chr10 90097117 90097284 -55492004 + AluSq SINE Alu 22 189 -124 267 297 0 0 chr10 90097378 90097452 -55491836 - HsTC2 DNA Tc2 -3 1895 1822 1028 198 63 41 chr10 90097593 90097830 -55491458 - L1MB7 LINE L1 -23 6161 5914 276 77 0 0 chr10 90097830 90097869 -55491419 + (TA)n Simple_repeat Simple_repeat 2 40 0 1028 198 63 41 chr10 90097869 90097949 -55491339 - L1MB7 LINE L1 -270 5914 5837 408 105 0 0 chr10 90098045 90098102 -55491186 - Alu SINE Alu -251 57 1 1017 296 65 41 chr10 90098177 90098684 -55490604 + MLT1H1 LTR MaLR 37 555 0 22 56 0 0 chr10 90098922 90098958 -55490330 + AT_rich Low_complexity Low_complexity 1 36 0 189 0 0 0 chr10 90099638 90099659 -55489629 + (TAAA)n Simple_repeat Simple_repeat 3 23 0 203 0 37 0 chr10 90099661 90099688 -55489600 + (TA)n Simple_repeat Simple_repeat 2 29 0 695 108 9 0 chr10 90100154 90100265 -55489023 + (TTTC)n Simple_repeat Simple_repeat 1 112 0 1830 120 78 0 chr10 90100265 90100523 -55488765 - AluSg SINE Alu -32 278 1 288 337 20 0 chr10 90100538 90100636 -55488652 + L2 LINE L2 3192 3291 -22 402 341 35 6 chr10 90100760 90100930 -55488358 - MIR SINE MIR -79 183 9 238 229 0 0 chr10 90101641 90101689 -55487599 + MIR SINE MIR 98 145 -63 2098 115 0 42 chr10 90102544 90102857 -55486431 + AluSx SINE Alu 1 300 -12 426 297 29 81 chr10 90102921 90103167 -55486121 + L2 LINE L2 2835 3067 -246 239 54 27 0 chr10 90103719 90103756 -55485532 + (TTCA)n Simple_repeat Simple_repeat 1 38 0 253 319 141 15 chr10 90103765 90103900 -55485388 + MIR SINE MIR 4 155 -107 336 328 67 32 chr10 90104361 90104555 -55484733 - MIR SINE MIR -50 212 17 258 255 33 0 chr10 90106894 90107111 -55482177 + (TA)n Simple_repeat Simple_repeat 1 224 0 1835 166 0 26 chr10 90107436 90107744 -55481544 + AluJo SINE Alu 1 300 -12 389 297 169 0 chr10 90107796 90107944 -55481344 + MER5A DNA MER1_type 15 187 -2 210 336 92 0 chr10 90107965 90108084 -55481204 + MIR SINE MIR 126 255 -7 1054 234 91 23 chr10 90108541 90108883 -55480405 + MLT1A1 LTR MaLR 1 365 0 348 24 0 0 chr10 90109784 90109825 -55479463 + (CA)n Simple_repeat Simple_repeat 1 41 0 4874 193 31 15 chr10 90111552 90112569 -55476719 + Tigger6a DNA MER2_type 50 1083 0 660 122 24 0 chr10 90112579 90112702 -55476586 + (TGGA)n Simple_repeat Simple_repeat 1 126 0 180 0 0 0 chr10 90115412 90115432 -55473856 + (TA)n Simple_repeat Simple_repeat 2 21 0 219 36 0 0 chr10 90116290 90116318 -55472970 + (T)n Simple_repeat Simple_repeat 1 28 0 334 297 0 90 chr10 90116703 90116858 -55472430 - MLT1J LTR MaLR -268 243 103 225 256 186 23 chr10 90118196 90118325 -55470963 - MIR SINE MIR -62 200 51 186 228 114 38 chr10 90119053 90119132 -55470156 + MIR SINE MIR 23 107 -155 354 346 27 16 chr10 90119407 90119592 -55469696 - MER5A DNA MER1_type 0 189 3 25 0 0 0 chr10 90119893 90119918 -55469370 + AT_rich Low_complexity Low_complexity 1 25 0 553 285 120 35 chr10 90120099 90120523 -55468765 - L1MC4a LINE L1 -1919 5889 5430 2160 125 0 0 chr10 90121311 90121636 -55467652 + AluSx SINE Alu 1 312 0 5639 102 23 49 chr10 90123092 90124144 -55465144 + L1PA11 LINE L1 5152 6174 0 28 48 0 0 chr10 90126310 90126352 -55462936 + AT_rich Low_complexity Low_complexity 1 42 0 459 252 54 0 chr10 90126595 90126706 -55462582 - MER94 DNA DNA -1 133 17 583 291 214 5 chr10 90126872 90127078 -55462210 + MIR SINE MIR 14 262 0 809 255 113 19 chr10 90127336 90127708 -55461580 - L1ME3A LINE L1 -226 5944 5538 228 282 194 0 chr10 90127854 90127978 -55461310 + L2 LINE L2 1876 2023 -1291 237 108 0 0 chr10 90128463 90128500 -55460788 + (T)n Simple_repeat Simple_repeat 1 37 0 313 276 55 55 chr10 90128792 90128919 -55460369 - MIR SINE MIR -1 261 135 2320 105 7 0 chr10 90129540 90129846 -55459442 + AluSx SINE Alu 1 308 -4 254 161 0 18 chr10 90129863 90129919 -55459369 + GA-rich Low_complexity Low_complexity 2 56 0 324 70 0 0 chr10 90130952 90130995 -55458293 + (CA)n Simple_repeat Simple_repeat 1 43 0 186 298 18 0 chr10 90131530 90131587 -55457701 + L2 LINE L2 3210 3267 -5 495 288 56 0 chr10 90132045 90132205 -55457083 - MER5B DNA MER1_type 0 178 10 297 167 17 0 chr10 90132266 90132326 -55456962 + MER5A DNA MER1_type 46 106 -83 181 80 0 0 chr10 90132327 90132352 -55456936 - MER5B DNA MER1_type -121 57 33 327 312 71 14 chr10 90132601 90132742 -55456546 - MIR3 SINE MIR -16 192 44 2520 57 0 0 chr10 90132859 90133155 -55456133 - AluY SINE Alu -15 296 1 345 255 183 7 chr10 90133701 90133854 -55455434 + MER5A DNA MER1_type 9 188 -1 257 290 50 40 chr10 90133892 90133992 -55455296 + MER5A DNA MER1_type 64 164 -25 1778 163 0 0 chr10 90135517 90135793 -55453495 + AluSx SINE Alu 1 276 -36 1924 172 47 47 chr10 90136379 90136803 -55452485 + MSTB1 LTR MaLR 1 424 -8 226 324 27 27 chr10 90136900 90136974 -55452314 + L2 LINE L2 3193 3266 -6 198 318 61 15 chr10 90137340 90137406 -55451882 + L2 LINE L2 3174 3242 -30 324 127 0 0 chr10 90137410 90137465 -55451823 + (TG)n Simple_repeat Simple_repeat 2 56 0 3418 184 105 5 chr10 90137778 90138529 -55450759 + LTR1B LTR ERV1 1 826 0 1651 194 0 3 chr10 90138811 90139100 -55450188 + AluJb SINE Alu 1 288 -24 378 237 149 0 chr10 90140252 90140366 -55448922 - MIR SINE MIR -22 240 110 1723 163 3 31 chr10 90140372 90140696 -55448592 - AluSx SINE Alu 0 318 3 47 61 0 0 chr10 90140821 90140903 -55448385 + AT_rich Low_complexity Low_complexity 1 82 0 23 0 0 0 chr10 90141718 90141741 -55447547 + AT_rich Low_complexity Low_complexity 1 23 0 207 225 99 70 chr10 90142280 90142351 -55446937 - MIR SINE MIR -98 110 38 2296 77 0 7 chr10 90144654 90144972 -55444316 + AluY SINE Alu 1 316 0 297 297 135 38 chr10 90144975 90145241 -55444047 - L1ME LINE L1 -520 5601 5310 1537 197 0 52 chr10 90145721 90146031 -55443257 + AluJo SINE Alu 1 294 -18 360 119 0 0 chr10 90146032 90146091 -55443197 + (CA)n Simple_repeat Simple_repeat 2 60 0 21 0 0 0 chr10 90146240 90146261 -55443027 + AT_rich Low_complexity Low_complexity 1 21 0 261 0 0 0 chr10 90146384 90146413 -55442875 + (T)n Simple_repeat Simple_repeat 1 29 0 203 129 0 0 chr10 90146898 90146929 -55442359 + L2 LINE L2 3234 3264 -8 1125 218 74 85 chr10 90147390 90147862 -55441426 + MLT1C LTR MaLR 1 467 0 1435 185 50 31 chr10 90150695 90151080 -55438208 + MSTC LTR MaLR 2 428 0 258 361 45 8 chr10 90152822 90152955 -55436333 + MLT1J LTR MaLR 356 493 -18 2106 125 7 3 chr10 90153801 90154097 -55435191 + AluSq SINE Alu 1 297 -16 1615 161 6 40 chr10 90154154 90154477 -55434811 + AluJo SINE Alu 1 312 0 490 314 109 0 chr10 90155268 90155497 -55433791 + L2 LINE L2 2313 2566 -748 225 159 0 0 chr10 90156263 90156307 -55432981 + (TG)n Simple_repeat Simple_repeat 1 44 0 211 368 0 0 chr10 90156313 90156381 -55432907 + L2 LINE L2 3201 3268 -4 244 327 76 24 chr10 90156528 90156739 -55432549 - MER90 LTR ERV1 -205 370 149 2407 60 0 13 chr10 90157298 90157599 -55431689 + AluY SINE Alu 1 297 -14 198 352 28 0 chr10 90158111 90158182 -55431106 + L2 LINE L2 3241 3313 0 43475 35 26 1 chr10 90158406 90163634 -55425654 + L1P LINE L1 5 5358 -788 216 264 173 64 chr10 90163881 90163991 -55425297 + L2 LINE L2 3145 3266 -6 2322 88 0 0 chr10 90164088 90164396 -55424892 + AluSp SINE Alu 1 308 0 210 118 0 0 chr10 90164621 90164655 -55424633 + (TA)n Simple_repeat Simple_repeat 2 35 0 200 330 19 19 chr10 90165110 90165213 -55424075 - MIR SINE MIR -113 149 47 205 211 0 0 chr10 90166334 90166372 -55422916 - MIR SINE MIR -112 150 113 240 35 0 0 chr10 90170141 90170170 -55419118 + (TG)n Simple_repeat Simple_repeat 2 30 0 441 325 57 17 chr10 90170234 90170470 -55418818 - MIR SINE MIR -10 252 5 221 211 18 0 chr10 90171075 90171132 -55418156 + GA-rich Low_complexity Low_complexity 1 58 0 245 324 0 0 chr10 90171421 90171489 -55417799 + CT-rich Low_complexity Low_complexity 3 70 0 198 387 21 0 chr10 90171491 90171584 -55417704 - L2 LINE L2 -5 3267 3173 203 103 26 0 chr10 90171702 90171741 -55417547 + (TGG)n Simple_repeat Simple_repeat 3 42 0 197 218 10 158 chr10 90172548 90172649 -55416639 + MIR SINE MIR 66 151 -111 1770 183 45 15 chr10 90173289 90173622 -55415666 - MER61A LTR ERV1 0 343 1 1979 98 80 0 chr10 90173868 90174143 -55415145 + AluSq SINE Alu 1 297 -16 191 213 149 0 chr10 90174184 90174231 -55415057 - L2 LINE L2 0 3272 3219 246 32 0 0 chr10 90175698 90175729 -55413559 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 256 291 60 0 chr10 90175750 90175867 -55413421 + L1MB3 LINE L1 -176 4294967243 -6333 2953 226 23 28 chr10 90176310 90177229 -55412059 + L1MB3 LINE L1 805 1787 -4516 1505 237 44 20 chr10 90177255 90177752 -55411536 + L1MB3 LINE L1 3275 3783 -2599 * 4910 189 20 18 chr10 90177748 90179124 -55410164 + L1MB3 LINE L1 5042 6417 -2 270 239 84 14 chr10 90179705 90179776 -55409512 - MIR SINE MIR -182 80 5 3924 25 0 14 chr10 90180485 90180920 -55408368 - SVA Other Other 0 1386 958 302 277 78 21 chr10 90181384 90181525 -55407763 + MIR SINE MIR 37 185 -77 211 277 0 15 chr10 90181527 90181592 -55407696 + (CATA)n Simple_repeat Simple_repeat 3 66 0 1593 93 133 19 chr10 90181655 90181925 -55407363 + AluSg1 SINE Alu 1 301 -8 2279 91 0 3 chr10 90181925 90182233 -55407055 + AluY SINE Alu 1 308 -3 1012 255 32 25 chr10 90182312 90182626 -55406662 + L1MB7 LINE L1 5868 6183 -1 352 336 81 19 chr10 90182929 90183140 -55406148 - MLT1I LTR MaLR -177 232 9 2034 145 0 7 chr10 90183941 90184237 -55405051 + AluSx SINE Alu 1 294 -18 481 326 16 47 chr10 90184788 90184981 -55404307 + MER5A DNA MER1_type 1 187 -2 628 269 34 14 chr10 90186517 90186725 -55402563 + MIR SINE MIR 51 262 0 22 35 0 0 chr10 90186753 90186782 -55402506 + AT_rich Low_complexity Low_complexity 1 29 0 202 175 25 0 chr10 90187025 90187065 -55402223 + L3b LINE CR1 1529 1569 -14 304 343 40 40 chr10 90238024 90238199 -55351089 - MIR3 SINE MIR -4 204 30 3672 87 2 0 chr10 90238583 90239066 -55350222 - L1PA10 LINE L1 -47 6121 5638 2706 106 24 0 chr10 90239061 90239656 -55349632 + L1PA10 LINE L1 5037 5640 -528 * 243 152 0 0 chr10 90239876 90239922 -55349366 + (TG)n Simple_repeat Simple_repeat 1 46 0 2299 92 13 7 chr10 90240348 90240653 -55348635 - AluSg SINE Alu -3 307 1 337 231 108 54 chr10 90241038 90241168 -55348120 - MER69A DNA AcHobo -33 144 8 279 0 0 0 chr10 90241230 90241261 -55348027 + (CA)n Simple_repeat Simple_repeat 2 32 0 385 373 21 33 chr10 90242107 90242348 -55346940 - L1MC/D LINE L1 -2027 5781 5544 3817 178 20 18 chr10 90242789 90242995 -55346293 - L1MA9 LINE L1 -311 6001 5797 222 37 0 0 chr10 90242995 90243022 -55346266 + (TG)n Simple_repeat Simple_repeat 1 27 0 3817 178 20 18 chr10 90243022 90243646 -55345642 - L1MA9 LINE L1 -515 5797 5164 309 326 30 15 chr10 90243874 90244006 -55345282 + L3 LINE CR1 1443 1576 -1 259 308 152 43 chr10 90245751 90246027 -55343261 + L2 LINE L2 2445 2750 -564 275 331 80 34 chr10 90246331 90246594 -55342694 - L2 LINE L2 -830 2484 2210 741 303 43 69 chr10 90246670 90247420 -55341868 + L2 LINE L2 2597 3313 0 25 0 0 0 chr10 90247910 90247935 -55341353 + AT_rich Low_complexity Low_complexity 1 25 0 326 297 55 41 chr10 90247998 90248143 -55341145 + MIR SINE MIR 20 166 -96 225 326 31 107 chr10 90248954 90249150 -55340138 - L2 LINE L2 -50 3222 3042 226 266 32 40 chr10 90250930 90251067 -55338221 + MIR SINE MIR 40 174 -88 1963 133 3 7 chr10 90251382 90251684 -55337604 + AluSg SINE Alu 1 301 -9 308 274 49 0 chr10 90251932 90252034 -55337254 + CT-rich Low_complexity Low_complexity 2 108 0 272 274 16 0 chr10 90254157 90254219 -55335069 + MER94 DNA DNA 72 134 0 574 146 19 0 chr10 90254643 90254746 -55334542 - L1PA13 LINE L1 -4 6159 6055 219 338 68 39 chr10 90255194 90255401 -55333887 + L2 LINE L2 2765 2977 -337 223 283 19 0 chr10 90255460 90255513 -55333775 + L2 LINE L2 2986 3039 -233 369 325 8 0 chr10 90255879 90255999 -55333289 - LTR33 LTR ERVL -1 520 400 437 272 52 29 chr10 90256156 90256292 -55332996 - LTR33 LTR ERVL -364 157 19 211 306 71 10 chr10 90256295 90256393 -55332895 + L2 LINE L2 3210 3313 0 296 214 39 10 chr10 90257601 90257691 -55331597 + (TA)n Simple_repeat Simple_repeat 2 97 -10 2042 124 55 0 chr10 90257691 90257982 -55331306 - AluSg SINE Alu -3 307 1 296 214 39 10 chr10 90257982 90257994 -55331294 + (TA)n Simple_repeat Simple_repeat 97 107 0 480 294 133 64 chr10 90258191 90258363 -55330925 - L1ME3 LINE L1 -212 5950 5791 6089 90 10 41 chr10 90258363 90259001 -55330287 - L1PA10 LINE L1 -2 6166 5510 1471 145 5 0 chr10 90259001 90259222 -55330066 + AluSg/x SINE Alu 89 310 -2 6089 90 10 41 chr10 90259222 90260240 -55329048 - L1PA10 LINE L1 -658 5510 4544 480 294 133 64 chr10 90260240 90260584 -55328704 - L1ME3 LINE L1 -371 5791 5398 205 227 0 45 chr10 90260607 90260695 -55328593 + A-rich Low_complexity Low_complexity 1 84 0 264 59 0 0 chr10 90261555 90261589 -55327699 + (TG)n Simple_repeat Simple_repeat 1 34 0 22 0 0 0 chr10 90262424 90262446 -55326842 + AT_rich Low_complexity Low_complexity 1 22 0 483 73 0 0 chr10 90263051 90263119 -55326169 + (TG)n Simple_repeat Simple_repeat 2 69 0 254 322 69 0 chr10 90263761 90263848 -55325440 - L2 LINE L2 -29 3284 3192 320 149 245 0 chr10 90266342 90266436 -55322852 + MER53 DNA DNA 1 117 -72 4228 140 41 37 chr10 90266439 90266762 -55322526 - Tigger1 DNA MER2_type 0 2418 2098 2300 62 10 0 chr10 90266762 90267053 -55322235 - AluY SINE Alu -17 294 1 4228 140 41 37 chr10 90267053 90267454 -55321834 - Tigger1 DNA MER2_type -320 2098 1688 2281 98 0 3 chr10 90267454 90267759 -55321529 - AluSx SINE Alu -8 304 1 4228 140 41 37 chr10 90267759 90267812 -55321476 - Tigger1 DNA MER2_type -730 1688 1637 1418 197 54 3 chr10 90267816 90268111 -55321177 - Tigger1 DNA MER2_type -2108 310 1 229 191 16 0 chr10 90268122 90268185 -55321103 - MER53 DNA DNA -111 78 15 3429 211 75 12 chr10 90268185 90269086 -55320202 - L1MB8 LINE L1 -13 6165 5207 347 234 93 83 chr10 90271128 90271418 -55317870 + L1ME3A LINE L1 746 1038 -5081 213 235 29 20 chr10 90271669 90271771 -55317517 + A-rich Low_complexity Low_complexity 1 103 0 511 245 119 60 chr10 90271822 90272157 -55317131 + L1ME3A LINE L1 2128 2482 -3647 611 283 38 40 chr10 90272334 90272733 -55316555 + L1ME3A LINE L1 5524 5921 -232 757 171 12 171 chr10 90273299 90273551 -55315737 - MER20 DNA MER1_type -7 212 1 336 335 161 13 chr10 90273634 90273938 -55315350 + L3 LINE CR1 1205 1553 -24 22 0 0 0 chr10 90275823 90275845 -55313443 + AT_rich Low_complexity Low_complexity 1 22 0 1392 242 61 30 chr10 90276047 90276571 -55312717 - MER114 LTR ERV -76 572 33 25 65 0 0 chr10 90276588 90276634 -55312654 + AT_rich Low_complexity Low_complexity 1 46 0 23 97 0 0 chr10 90276861 90276933 -55312355 + AT_rich Low_complexity Low_complexity 1 72 0 21 57 0 0 chr10 90276948 90276983 -55312305 + AT_rich Low_complexity Low_complexity 1 35 0 1348 189 162 3 chr10 90277218 90277413 -55311875 - L1MB1 LINE L1 -1 6167 6004 1381 168 11 0 chr10 90277413 90277681 -55311607 - L1MA4 LINE L1 -1 6299 6029 1348 189 162 3 chr10 90277681 90277818 -55311470 - L1MB1 LINE L1 -164 6004 5782 206 253 25 13 chr10 90277819 90277898 -55311390 + (CAATA)n Simple_repeat Simple_repeat 2 81 0 404 81 0 81 chr10 90277902 90278026 -55311262 + (TA)n Simple_repeat Simple_repeat 1 114 0 2109 207 33 49 chr10 90278060 90278964 -55310324 - L1MB1 LINE L1 -375 5793 4895 3983 186 23 53 chr10 90278970 90279677 -55309611 + L1 LINE L1 3956 4627 -1519 2080 126 0 10 chr10 90279677 90279979 -55309309 - AluSx SINE Alu -13 299 1 3983 186 23 53 chr10 90279979 90280252 -55309036 + L1 LINE L1 4627 4907 -1239 1811 136 30 0 chr10 90280295 90280560 -55308728 + AluSx SINE Alu 1 273 -39 60 15 0 0 chr10 90282247 90282314 -55306974 + AT_rich Low_complexity Low_complexity 1 67 0 211 221 117 0 chr10 90282473 90282550 -55306738 + MIR SINE MIR 106 191 -71 35 24 0 0 chr10 90282588 90282630 -55306658 + AT_rich Low_complexity Low_complexity 1 42 0 280 383 25 0 chr10 90283176 90283296 -55305992 + MIR3 SINE MIR 85 207 -1 325 295 192 27 chr10 90283504 90283728 -55305560 - MIR SINE MIR 0 262 2 2129 110 3 3 chr10 90285130 90285439 -55303849 - AluSg1 SINE Alu 0 309 1 269 356 8 0 chr10 90285785 90285903 -55303385 + CT-rich Low_complexity Low_complexity 3 121 0 228 211 0 0 chr10 90285953 90286024 -55303264 + (TG)n Simple_repeat Simple_repeat 1 71 0 488 282 4 9 chr10 90286181 90286348 -55302940 + L1MC4 LINE L1 6413 6600 -1204 1730 187 41 3 chr10 90286352 90286695 -55302593 + MLT1B LTR MaLR 34 389 -1 186 143 0 0 chr10 90286774 90286809 -55302479 + (TATATG)n Simple_repeat Simple_repeat 2 36 0 1745 161 123 38 chr10 90286817 90287048 -55302240 - LTR2B LTR ERV1 0 490 280 186 43 0 0 chr10 90287048 90287071 -55302217 + (CAGAA)n Simple_repeat Simple_repeat 1 23 0 1745 161 123 38 chr10 90287071 90287262 -55302026 - LTR2B LTR ERV1 -210 280 32 791 243 27 98 chr10 90287284 90287426 -55301862 + L1MC4 LINE L1 6699 6811 -1231 2568 64 0 0 chr10 90287426 90287753 -55301535 - L1PA8 LINE L1 -13 6159 5833 791 243 27 98 chr10 90287753 90287906 -55301382 + L1MC4 LINE L1 6811 6973 -1069 1654 258 104 20 chr10 90287991 90288402 -55300886 + L1MC4 LINE L1 7246 7726 -316 2179 121 0 0 chr10 90288402 90288699 -55300589 - AluSq SINE Alu -16 297 1 1654 258 104 20 chr10 90288699 90288892 -55300396 + L1MC4 LINE L1 7726 7901 -141 228 250 0 0 chr10 90288954 90289006 -55300282 + (TCTA)n Simple_repeat Simple_repeat 2 53 0 312 319 49 49 chr10 90289133 90289337 -55299951 - MIR SINE MIR -36 226 23 242 28 0 28 chr10 90289817 90289853 -55299435 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 2588 36 0 10 chr10 90290885 90291188 -55298100 - AluY SINE Alu -11 300 1 2144 70 63 0 chr10 90291291 90291576 -55297712 - AluY SINE Alu -8 303 1 212 348 0 34 chr10 90291925 90292014 -55297274 + MIR SINE MIR 61 146 -116 206 229 0 21 chr10 90292440 90292488 -55296800 + GA-rich Low_complexity Low_complexity 1 47 0 241 195 106 106 chr10 90292807 90292930 -55296358 - L1MC4 LINE L1 -1306 6736 6614 229 174 41 102 chr10 90292893 90292991 -55296297 + L1MC4 LINE L1 6615 6706 -1336 * 245 217 0 65 chr10 90293033 90293125 -55296163 + L1MC4 LINE L1 6617 6702 -1340 186 240 0 0 chr10 90293126 90293176 -55296112 + (TA)n Simple_repeat Simple_repeat 2 51 0 23 0 0 0 chr10 90293547 90293570 -55295718 + AT_rich Low_complexity Low_complexity 1 23 0 390 42 0 0 chr10 90294031 90294079 -55295209 + (CA)n Simple_repeat Simple_repeat 1 48 0 27 0 0 0 chr10 90294260 90294287 -55295001 + AT_rich Low_complexity Low_complexity 1 27 0 371 320 126 31 chr10 90294517 90294739 -55294549 + MIR SINE MIR 1 243 -19 218 295 74 32 chr10 90295584 90295679 -55293609 + L2 LINE L2 3158 3256 -16 25 31 0 0 chr10 90295725 90295757 -55293531 + AT_rich Low_complexity Low_complexity 1 32 0 26 50 0 0 chr10 90297089 90297129 -55292159 + AT_rich Low_complexity Low_complexity 1 40 0 253 203 44 95 chr10 90297391 90297549 -55291739 - L1MC5 LINE L1 -420 7541 7392 931 188 61 73 chr10 90297618 90297948 -55291340 - L1MC5 LINE L1 -754 7207 6882 289 329 129 7 chr10 90297999 90298154 -55291134 - MIR SINE MIR -42 220 47 237 312 28 83 chr10 90298276 90298385 -55290903 - MIR SINE MIR -113 149 47 282 29 0 0 chr10 90298533 90298568 -55290720 + (CA)n Simple_repeat Simple_repeat 1 35 0 1119 167 23 0 chr10 90299722 90299937 -55289351 + L1MA6 LINE L1 6080 6299 -1 1154 321 108 45 chr10 90300621 90301836 -55287452 + L2 LINE L2 940 2230 -1084 6044 91 66 4 chr10 90302160 90303154 -55286134 - L1PA14 LINE L1 -17 6144 5129 672 229 154 0 chr10 90303234 90303422 -55285866 - MIR SINE MIR -21 241 25 280 274 65 32 chr10 90304410 90304596 -55284692 - L1ME4a LINE L1 -4 6117 5926 910 294 116 6 chr10 90304726 90305080 -55284208 - LTR16B LTR ERVL -6 458 66 463 307 181 42 chr10 90305694 90306633 -55282655 - L1M4 LINE L1 -1488 4658 3589 1569 172 0 4 chr10 90306875 90307136 -55282152 + AluSq SINE Alu 1 260 -53 181 375 31 31 chr10 90307323 90307483 -55281805 - L2 LINE L2 -456 2858 2699 196 200 0 0 chr10 90307662 90307697 -55281591 + MIR SINE MIR 216 250 -12 382 216 102 80 chr10 90308107 90308283 -55281005 - MLT1J2 LTR MaLR -2 448 269 30 27 0 0 chr10 90309061 90309098 -55280190 + AT_rich Low_complexity Low_complexity 1 37 0 1010 124 57 0 chr10 90309150 90309327 -55279961 - L1MA7 LINE L1 -30 6261 6075 506 296 86 34 chr10 90311424 90311657 -55277631 + MIR SINE MIR 18 262 0 31 26 0 0 chr10 90312046 90312084 -55277204 + AT_rich Low_complexity Low_complexity 1 38 0 25 51 0 0 chr10 90312281 90312320 -55276968 + AT_rich Low_complexity Low_complexity 1 39 0 310 268 43 55 chr10 90312401 90312565 -55276723 - MLT1J2 LTR MaLR -23 427 266 231 243 100 0 chr10 90313486 90313556 -55275732 + MIR SINE MIR 84 160 -102 438 287 22 15 chr10 90313970 90314106 -55275182 - MLT1I LTR MaLR -204 205 69 347 369 0 23 chr10 90314769 90314899 -55274389 + MIR SINE MIR 17 143 -65 418 332 168 31 chr10 90315201 90315819 -55273469 + L2 LINE L2 2149 2851 -463 335 349 61 15 chr10 90315902 90316034 -55273254 + L2 LINE L2 3134 3271 -1 345 331 46 46 chr10 90316891 90317220 -55272068 + L1MB3 LINE L1 5480 5808 -2000 4303 132 19 8 chr10 90319437 90320186 -55269102 + L1MA4 LINE L1 5544 6300 0 2451 156 29 56 chr10 90320186 90320704 -55268584 + L1MA8 LINE L1 5776 6279 -12 213 114 29 0 chr10 90320824 90320859 -55268429 + GA-rich Low_complexity Low_complexity 3 38 0 256 344 22 0 chr10 90321008 90321098 -55268190 - L2 LINE L2 -536 2778 2687 193 324 14 14 chr10 90321351 90321422 -55267866 + L2 LINE L2 3243 3313 0 241 324 0 14 chr10 90322263 90322334 -55266954 + L2 LINE L2 3184 3253 -19 227 208 135 42 chr10 90322763 90322859 -55266429 + L2 LINE L2 3168 3272 0 1074 156 38 10 chr10 90324107 90324319 -55264969 + MER2 DNA MER2_type 1 211 -134 4987 174 56 20 chr10 90324432 90325084 -55264204 - L1MC2 LINE L1 -1 6343 5634 333 0 0 0 chr10 90325084 90325121 -55264167 + (TG)n Simple_repeat Simple_repeat 2 38 0 4987 174 56 20 chr10 90325121 90325625 -55263663 - L1MC2 LINE L1 -710 5634 5149 975 186 12 63 chr10 90325701 90325953 -55263335 + L1MB3 LINE L1 5944 6182 -1 646 228 5 27 chr10 90325959 90326143 -55263145 - L1MC2 LINE L1 -1053 5093 4914 338 0 24 0 chr10 90326840 90326882 -55262406 + (TG)n Simple_repeat Simple_repeat 2 44 0 190 184 0 0 chr10 90326984 90327022 -55262266 - MIR SINE MIR -44 218 181 660 271 93 0 chr10 90327862 90328013 -55261275 + MER45A DNA AcHobo 11 175 -3 1986 142 3 0 chr10 90328273 90328568 -55260720 - AluSx SINE Alu -16 296 1 240 35 0 0 chr10 90329149 90329178 -55260110 + (TTG)n Simple_repeat Simple_repeat 2 30 0 193 265 48 24 chr10 90329850 90329933 -55259355 + MIR SINE MIR 81 165 -97 933 105 7 33 chr10 90330280 90330432 -55258856 + L1PA16 LINE L1 6019 6166 0 653 277 127 9 chr10 90330617 90330837 -55258451 + MIR SINE MIR 6 251 -11 1828 212 51 24 chr10 90331177 90331686 -55257602 + Charlie1b DNA MER1_type 1 523 0 2341 124 76 37 chr10 90332348 90332686 -55256602 + MSTB LTR MaLR 1 359 -67 2332 81 3 0 chr10 90332686 90332983 -55256305 - AluY SINE Alu -13 298 1 2341 124 76 37 chr10 90332983 90333054 -55256234 + MSTB LTR MaLR 359 426 0 245 146 37 131 chr10 90334664 90334776 -55254512 + MER5A DNA MER1_type 6 104 -85 329 252 113 9 chr10 90335769 90335884 -55253404 - MIR SINE MIR -55 207 81 836 278 35 52 chr10 90336297 90336700 -55252588 - MLT1J1 LTR MaLR -33 413 18 443 290 74 11 chr10 90337663 90337839 -55251449 + MIR SINE MIR 35 221 -41 225 247 35 0 chr10 90337954 90338039 -55251249 + (TA)n Simple_repeat Simple_repeat 1 88 0 808 165 0 0 chr10 90339171 90339304 -55249984 - FLAM_C SINE Alu 0 133 1 2178 96 3 7 chr10 90339687 90339980 -55249308 + AluSc SINE Alu 1 292 -17 2244 88 0 0 chr10 90341824 90342119 -55247169 + AluSc SINE Alu 1 295 -14 21 71 0 0 chr10 90342326 90342368 -55246920 + AT_rich Low_complexity Low_complexity 1 42 0 596 307 62 77 chr10 90342686 90342951 -55246337 - L2 LINE L2 -1215 2099 1840 2243 117 0 0 chr10 90342951 90343260 -55246028 + AluSx SINE Alu 1 309 -3 596 307 62 77 chr10 90343260 90343382 -55245906 - L2 LINE L2 -1474 1840 1718 238 293 210 26 chr10 90343391 90343620 -55245668 - L2 LINE L2 -1744 1570 1300 1866 123 4 11 chr10 90343716 90343993 -55245295 + AluSx SINE Alu 1 275 -37 288 111 0 0 chr10 90343997 90344042 -55245246 + (CAAAA)n Simple_repeat Simple_repeat 1 45 0 2102 116 3 0 chr10 90344666 90344951 -55244337 - AluSg SINE Alu -24 286 1 2924 163 4 8 chr10 90344964 90345472 -55243816 - L1PA16 LINE L1 0 6166 5661 304 313 56 40 chr10 90345551 90345800 -55243488 - L1ME LINE L1 -384 5737 5485 747 148 0 31 chr10 90345914 90346042 -55243246 + AluJo SINE Alu 5 128 -174 330 139 0 0 chr10 90346043 90346115 -55243173 + (TA)n Simple_repeat Simple_repeat 1 72 0 885 236 0 0 chr10 90346116 90346294 -55242994 + AluJo SINE Alu 134 311 -1 30 0 0 0 chr10 90346644 90346674 -55242614 + AT_rich Low_complexity Low_complexity 1 30 0 352 240 42 0 chr10 90346816 90346912 -55242376 + MIR SINE MIR 159 258 -4 3411 187 51 1 chr10 90348063 90348752 -55240536 - L1MC2 LINE L1 -2 6622 5900 1011 201 5 0 chr10 90348754 90348968 -55240320 + L1M4 LINE L1 4716 4930 -1216 3767 260 85 47 chr10 90348999 90350755 -55238533 - L1MC2 LINE L1 -1735 4691 2870 1816 211 33 91 chr10 90350762 90351313 -55237975 + LTR26E LTR ERV1 1 610 -12 1718 250 63 25 chr10 90351340 90352705 -55236583 - L1MC2 LINE L1 -3572 2854 1488 1491 201 164 43 chr10 90352730 90353174 -55236114 - L1MC2 LINE L1 -5673 753 256 1994 223 135 13 chr10 90354015 90354571 -55234717 - MLT1E2 LTR MaLR -2 624 1 27 29 0 0 chr10 90355170 90355204 -55234084 + AT_rich Low_complexity Low_complexity 1 34 0 30 27 0 0 chr10 90355414 90355451 -55233837 + AT_rich Low_complexity Low_complexity 1 37 0 7195 47 17 0 chr10 90355451 90356439 -55232849 - L1PA6 LINE L1 -1 6153 5162 228 149 0 0 chr10 90356459 90356506 -55232782 + (TTCC)n Simple_repeat Simple_repeat 3 49 0 46 0 0 0 chr10 90357592 90357638 -55231650 + AT_rich Low_complexity Low_complexity 1 46 0 1746 47 0 0 chr10 90357852 90358086 -55231202 - L1PA3 LINE L1 0 6155 5939 1955 141 10 0 chr10 90358086 90358376 -55230912 - AluSg SINE Alu -13 297 5 198 306 41 27 chr10 90358705 90358900 -55230388 - MIR SINE MIR -3 259 2 539 292 21 47 chr10 90358952 90359144 -55230144 - MER5A DNA MER1_type -2 187 1 970 95 11 33 chr10 90361310 90361583 -55227705 + (CA)n Simple_repeat Simple_repeat 1 268 0 25 0 0 0 chr10 90362834 90362859 -55226429 + AT_rich Low_complexity Low_complexity 1 25 0 316 252 81 8 chr10 90363068 90363191 -55226097 + L1ME4a LINE L1 5990 6121 0 1989 184 29 0 chr10 90363763 90364139 -55225149 + MLT1B LTR MaLR 1 387 -3 1882 180 210 99 chr10 90364145 90364997 -55224291 - LTR28 LTR ERV1 -7 851 1 267 313 123 12 chr10 90365509 90365672 -55223616 + MIR SINE MIR 28 208 -54 201 336 119 14 chr10 90365840 90365983 -55223305 - MIR SINE MIR -71 191 34 1321 236 50 17 chr10 90366683 90366980 -55222308 + Tigger5 DNA MER2_type 1 307 -2016 1144 188 0 28 chr10 90366984 90367202 -55222086 + Tigger5 DNA MER2_type 2112 2323 0 356 255 28 90 chr10 90367662 90367807 -55221481 - L2 LINE L2 0 3272 3137 21 71 0 0 chr10 90368751 90368793 -55220495 + AT_rich Low_complexity Low_complexity 1 42 0 272 135 0 19 chr10 90368863 90368915 -55220373 + (TA)n Simple_repeat Simple_repeat 1 51 0 257 68 23 0 chr10 90369075 90369119 -55220169 + (TA)n Simple_repeat Simple_repeat 1 45 0 195 301 36 12 chr10 90369241 90369324 -55219964 - MIR SINE MIR -12 250 166 735 243 33 28 chr10 90372062 90372276 -55217012 - MIR SINE MIR -7 255 41 240 312 106 28 chr10 90372895 90373036 -55216252 + L3 LINE CR1 1154 1305 -272 348 311 65 60 chr10 90373695 90373943 -55215345 + L3 LINE CR1 1326 1574 -3 1174 109 13 0 chr10 90374715 90374871 -55214417 + AluSq SINE Alu 138 295 -18 262 276 45 22 chr10 90374931 90375065 -55214223 - L1ME LINE L1 -267 5854 5718 28 0 0 0 chr10 90375967 90375995 -55213293 + AT_rich Low_complexity Low_complexity 1 28 0 2182 112 0 19 chr10 90376002 90376314 -55212974 + AluSq SINE Alu 1 306 -7 180 366 27 70 chr10 90376539 90376725 -55212563 + L2 LINE L2 2889 3066 -206 617 270 169 45 chr10 90377145 90377435 -55211853 - MLT1L LTR MaLR -125 490 71 984 256 192 20 chr10 90380243 90380406 -55208882 + L1MC4 LINE L1 6470 6604 -1438 300 27 0 0 chr10 90380406 90380443 -55208845 + (TG)n Simple_repeat Simple_repeat 2 38 0 984 256 192 20 chr10 90380443 90380669 -55208619 + L1MC4 LINE L1 6604 6926 -1116 * 1832 156 61 3 chr10 90380667 90380995 -55208293 - L1MA9 LINE L1 -377 5935 5589 231 146 0 0 chr10 90380997 90381052 -55208236 + (TG)n Simple_repeat Simple_repeat 2 56 0 948 248 55 19 chr10 90381054 90381364 -55207924 + L1MA9 LINE L1 5954 6274 -38 1749 237 69 54 chr10 90381380 90382206 -55207082 + L1MC4 LINE L1 6918 7903 -139 2313 98 0 0 chr10 90382830 90383127 -55206161 - AluSc SINE Alu -12 297 1 1569 188 92 3 chr10 90383305 90383640 -55205648 - MLT1A1 LTR MaLR 0 365 1 2611 67 11 6 chr10 90383948 90384307 -55204981 - L1PA13 LINE L1 -1 6162 5802 1447 93 0 5 chr10 90384308 90384512 -55204776 + L1PA13 LINE L1 5609 5811 -357 27 0 0 0 chr10 90384863 90384890 -55204398 + AT_rich Low_complexity Low_complexity 1 27 0 1177 8 0 0 chr10 90385201 90385333 -55203955 - AluY SINE Alu 0 311 180 625 204 65 119 chr10 90385664 90386016 -55203272 + L1MC5 LINE L1 6729 7061 -900 1494 170 62 82 chr10 90386024 90386412 -55202876 - L1PB4 LINE L1 -4 6152 5773 1437 215 40 103 chr10 90386429 90387187 -55202101 + L1MC5 LINE L1 7085 7794 -167 32 26 0 0 chr10 90387233 90387272 -55202016 + AT_rich Low_complexity Low_complexity 1 39 0 2198 108 19 58 chr10 90387314 90387692 -55201596 + THE1B LTR MaLR 1 363 -1 267 245 56 91 chr10 90388003 90388058 -55201230 - HAL1 LINE L1 -1591 916 861 357 62 0 0 chr10 90388058 90388106 -55201182 + (CA)n Simple_repeat Simple_repeat 2 49 0 267 245 56 91 chr10 90388106 90388193 -55201095 - HAL1 LINE L1 -1646 861 779 441 276 107 64 chr10 90388216 90388647 -55200641 - HAL1 LINE L1 -1810 697 53 1546 200 91 13 chr10 90388648 90389043 -55200245 - LTR37A LTR ERV1 0 426 1 23 0 0 0 chr10 90390018 90390041 -55199247 + AT_rich Low_complexity Low_complexity 1 23 0 462 223 9 109 chr10 90390426 90390625 -55198663 - MER92B LTR ERV1 -370 184 1 660 234 103 63 chr10 90390739 90391134 -55198154 - MER67C LTR ERV1 0 543 233 9538 29 0 1 chr10 90391189 90393100 -55196188 - L1PA3 LINE L1 -3 6152 4242 2625 23 0 0 chr10 90393100 90393405 -55195883 + L1PA3 LINE L1 3934 4238 -1908 1136 194 52 65 chr10 90393454 90393642 -55195646 - MER67B LTR ERV1 -340 321 137 2204 102 58 0 chr10 90393642 90393936 -55195352 - AluSx SINE Alu -1 311 1 1136 194 52 65 chr10 90393936 90394072 -55195216 - MER67B LTR ERV1 -524 137 1 268 276 74 31 chr10 90395001 90395139 -55194149 - MER5B DNA MER1_type -42 146 1 1142 234 47 4 chr10 90395568 90395825 -55193463 + MLT1F1 LTR MaLR 105 372 -195 616 207 25 0 chr10 90395829 90395950 -55193338 + MER20 DNA MER1_type 7 130 -89 374 127 18 0 chr10 90396018 90396073 -55193215 + MLT1F1 LTR MaLR 342 397 -145 1246 205 123 132 chr10 90396075 90396969 -55192319 - LTR1B LTR ERV1 0 1020 1 711 179 41 14 chr10 90396969 90397112 -55192176 + MLT1F1 LTR MaLR 421 567 0 21 36 0 0 chr10 90399120 90399148 -55190140 + AT_rich Low_complexity Low_complexity 1 28 0 27 0 0 0 chr10 90399223 90399250 -55190038 + AT_rich Low_complexity Low_complexity 1 27 0 306 285 108 33 chr10 90399799 90400013 -55189275 + L1MC/D LINE L1 5622 5851 -1957 255 125 0 0 chr10 90400467 90400507 -55188781 + (T)n Simple_repeat Simple_repeat 1 40 0 279 301 100 59 chr10 90401068 90401477 -55187811 + L2 LINE L2 2807 3232 -81 226 355 66 53 chr10 90401674 90401826 -55187462 - MER91A DNA MER1_type -7 189 36 1763 266 33 52 chr10 90401861 90403029 -55186259 + L1ME1 LINE L1 3286 6162 -4 1596 146 57 36 chr10 90403559 90403860 -55185428 + AluSx SINE Alu 1 307 -5 2283 121 0 0 chr10 90404097 90404410 -55184878 + AluSq SINE Alu 1 313 0 21 0 0 0 chr10 90404947 90404968 -55184320 + AT_rich Low_complexity Low_complexity 1 21 0 274 333 0 0 chr10 90405239 90405308 -55183980 - L2 LINE L2 0 3272 3204 382 255 21 97 chr10 90405327 90405472 -55183816 - L2 LINE L2 0 3313 3180 361 204 59 13 chr10 90405508 90405660 -55183628 + (TA)n Simple_repeat Simple_repeat 1 159 0 282 95 0 0 chr10 90405773 90405815 -55183473 + (TG)n Simple_repeat Simple_repeat 1 42 0 608 292 27 27 chr10 90406930 90407149 -55182139 - MLT1J LTR MaLR -56 455 237 241 225 125 38 chr10 90407318 90407398 -55181890 - MIR SINE MIR -108 154 68 457 279 0 0 chr10 90408018 90408122 -55181166 - MER58A DNA MER1_type -1 106 3 307 303 155 21 chr10 90408128 90408270 -55181018 - MIR SINE MIR -94 168 8 325 363 39 0 chr10 90408278 90408460 -55180828 - MIR SINE MIR 0 262 74 484 295 75 37 chr10 90459361 90459602 -55129686 - MIR SINE MIR -1 261 12 282 304 22 22 chr10 90460345 90460437 -55128851 - L2 LINE L2 0 3313 3222 592 296 18 23 chr10 90460493 90460713 -55128575 + MIR SINE MIR 37 255 -7 453 321 67 6 chr10 90460916 90461081 -55128207 + MIR SINE MIR 13 187 -75 641 230 20 26 chr10 90461089 90461241 -55128047 + MER45A DNA AcHobo 25 175 -3 376 198 37 0 chr10 90461245 90461326 -55127962 + MIR SINE MIR 178 261 -1 3895 154 17 11 chr10 90462047 90462189 -55127099 + MER50 LTR ERV1 1 141 -593 2743 70 124 8 chr10 90462189 90462591 -55126697 + LTR7 LTR ERV1 1 449 -1 3895 154 17 11 chr10 90462591 90463154 -55126134 + MER50 LTR ERV1 141 710 -24 1556 166 72 7 chr10 90463435 90463751 -55125537 + AluJb SINE Alu 1 334 0 2100 133 7 0 chr10 90463994 90464295 -55124993 + AluSx SINE Alu 1 303 -9 358 266 0 0 chr10 90464600 90464694 -55124594 + LTR8A LTR ERV1 600 693 -34 4054 146 21 22 chr10 90464943 90465519 -55123769 + LTR8A LTR ERV1 1 578 -149 1942 117 11 0 chr10 90465519 90465850 -55123438 + AluSx SINE Alu 1 334 0 4054 146 21 22 chr10 90465850 90465998 -55123290 + LTR8A LTR ERV1 578 725 -2 252 311 41 0 chr10 90466700 90466822 -55122466 + MER103 DNA DNA 16 142 -24 231 119 21 32 chr10 90466979 90467074 -55122214 + GA-rich Low_complexity Low_complexity 1 93 0 207 290 56 80 chr10 90468048 90468210 -55121078 + MIR3 SINE MIR 5 162 -46 21 57 0 0 chr10 90468921 90468956 -55120332 + AT_rich Low_complexity Low_complexity 1 35 0 26 0 0 0 chr10 90469012 90469038 -55120250 + AT_rich Low_complexity Low_complexity 1 26 0 216 0 0 0 chr10 90470197 90470221 -55119067 + (CA)n Simple_repeat Simple_repeat 1 24 0 529 302 47 12 chr10 90471140 90471312 -55117976 - MIR SINE MIR -48 214 37 182 348 149 33 chr10 90473139 90473320 -55115968 + L2 LINE L2 3055 3256 -16 22 70 0 0 chr10 90474178 90474221 -55115067 + AT_rich Low_complexity Low_complexity 1 43 0 405 252 152 50 chr10 90474223 90474525 -55114763 - L1ME4a LINE L1 0 6121 5789 26 50 0 0 chr10 90474852 90474892 -55114396 + AT_rich Low_complexity Low_complexity 1 40 0 1649 192 10 7 chr10 90475138 90475440 -55113848 - AluJb SINE Alu -9 303 1 1887 106 160 151 chr10 90475571 90476296 -55112992 + LTR12 LTR ERV1 1 2313 -125 582 324 12 0 chr10 90476299 90476469 -55112819 - MIR SINE MIR -71 191 20 247 238 0 0 chr10 90477079 90477142 -55112146 + LTR28 LTR ERV1 1 63 -957 * 2070 149 62 5 chr10 90477110 90477498 -55111790 + MER61C LTR ERV1 16 425 -9 1824 98 109 0 chr10 90477646 90477911 -55111377 - AluSx SINE Alu -15 297 4 478 311 62 6 chr10 90478041 90478218 -55111070 + MIR SINE MIR 47 233 -29 250 234 0 21 chr10 90478856 90478950 -55110338 + GA-rich Low_complexity Low_complexity 1 92 0 242 246 127 28 chr10 90480393 90480535 -55108753 + MLT1J1 LTR MaLR 1 156 -290 308 188 130 0 chr10 90481059 90481128 -55108160 + MER116 DNA Mariner 1 78 -2 201 74 0 0 chr10 90481436 90481463 -55107825 + (TTTTC)n Simple_repeat Simple_repeat 4 30 0 224 333 156 21 chr10 90481862 90482003 -55107285 - L2 LINE L2 -9 3263 3104 4455 133 21 75 chr10 90483533 90483744 -55105544 + Tigger3b DNA MER2_type 1 222 -2806 2097 117 3 0 chr10 90483744 90484026 -55105262 + AluSq SINE Alu 1 283 -30 4455 133 21 75 chr10 90484026 90484767 -55104521 + Tigger3b DNA MER2_type 222 902 -329 273 289 24 0 chr10 90486867 90486950 -55102338 + GA-rich Low_complexity Low_complexity 3 87 0 2271 119 0 0 chr10 90487646 90487949 -55101339 + AluSx SINE Alu 1 303 -9 234 62 0 0 chr10 90487949 90487981 -55101307 + (TA)n Simple_repeat Simple_repeat 2 33 0 350 289 54 132 chr10 90488208 90488289 -55100999 - L1MEd LINE L1 -4867 1549 1463 1429 154 3 101 chr10 90488289 90488626 -55100662 - AluJb SINE Alu -8 304 1 350 289 54 132 chr10 90488626 90488658 -55100630 - L1MEd LINE L1 -4953 1463 1430 1946 123 3 60 chr10 90488658 90488976 -55100312 + AluSx SINE Alu 1 300 -12 350 289 54 132 chr10 90488976 90489237 -55100051 - L1MEd LINE L1 -4986 1430 1264 1420 160 0 4 chr10 90489237 90489474 -55099814 - L1PA15 LINE L1 -1 6164 5929 350 289 54 132 chr10 90489474 90489695 -55099593 - L1MEd LINE L1 -5152 1264 1027 349 230 40 40 chr10 90490042 90490168 -55099120 - MER3 DNA MER1_type -2 207 82 1922 106 4 0 chr10 90490291 90490585 -55098703 - AluSc SINE Alu 0 309 29 420 256 74 42 chr10 90490931 90491146 -55098142 - L1ME3A LINE L1 -341 5829 5608 2265 110 0 3 chr10 90491238 90491548 -55097740 + AluSx SINE Alu 1 309 -3 244 0 0 53 chr10 90491630 90491668 -55097620 + (TTTTA)n Simple_repeat Simple_repeat 5 40 0 447 260 0 0 chr10 90491901 90492005 -55097283 - FLAM_C SINE Alu -38 105 2 1643 179 3 31 chr10 90492031 90492321 -55096967 - AluJo SINE Alu -30 282 1 489 326 82 42 chr10 90492342 90492462 -55096826 - L1ME3A LINE L1 -1028 5118 5004 327 25 0 0 chr10 90492462 90492502 -55096786 + (TG)n Simple_repeat Simple_repeat 1 40 0 489 326 82 42 chr10 90492502 90493210 -55096078 - L1ME3A LINE L1 -1142 5004 4237 241 298 16 16 chr10 90493228 90493349 -55095939 - L1ME3A LINE L1 -1992 4154 4034 506 296 6 12 chr10 90493365 90493527 -55095761 - MER5A DNA MER1_type -2 187 27 921 294 129 44 chr10 90493562 90493799 -55095489 - L2 LINE L2 -214 3099 2884 2011 150 0 0 chr10 90493799 90494086 -55095202 + AluSx SINE Alu 25 311 -1 921 294 129 44 chr10 90494086 90494459 -55094829 - L2 LINE L2 -429 2884 2421 680 208 50 0 chr10 90495040 90495242 -55094046 - L1MA8 LINE L1 -5 6286 6075 1617 163 4 11 chr10 90496051 90496321 -55092967 + AluSx SINE Alu 1 268 -44 313 330 9 0 chr10 90496355 90496461 -55092827 - L3 LINE CR1 -89 1488 1382 1208 217 30 21 chr10 90496691 90497023 -55092265 - MLT1A1 LTR MaLR -27 338 4 23 0 0 0 chr10 90498177 90498200 -55091088 + AT_rich Low_complexity Low_complexity 1 23 0 2303 75 3 17 chr10 90498329 90498624 -55090664 - AluY SINE Alu -12 299 9 245 318 249 35 chr10 90498685 90498886 -55090402 - L3 LINE CR1 -67 1510 1267 21 0 0 0 chr10 90499008 90499029 -55090259 + AT_rich Low_complexity Low_complexity 1 21 0 416 240 133 0 chr10 90499113 90499263 -55090025 + LTR33A LTR ERVL 328 497 -26 217 302 0 0 chr10 90499600 90499653 -55089635 + L2 LINE L2 3244 3296 -17 375 238 16 33 chr10 90500360 90500482 -55088806 + LTR33A LTR ERVL 3 122 -401 519 244 55 0 chr10 90500618 90500782 -55088506 + LTR33A LTR ERVL 328 500 -23 216 245 74 92 chr10 90500939 90501038 -55088250 + MIR SINE MIR 85 181 -81 2165 101 39 0 chr10 90501038 90501324 -55087964 + AluSx SINE Alu 1 297 -15 216 245 74 92 chr10 90501324 90501387 -55087901 + MIR SINE MIR 181 244 -18 191 389 29 7 chr10 90501503 90501642 -55087646 + MIR SINE MIR 118 259 -3 222 37 0 0 chr10 90501736 90501763 -55087525 + (TA)n Simple_repeat Simple_repeat 2 28 0 194 108 54 0 chr10 90501989 90502026 -55087262 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2367 77 0 22 chr10 90502044 90502356 -55086932 - AluY SINE Alu -6 305 1 2017 134 0 0 chr10 90502356 90502639 -55086649 - AluSq SINE Alu -28 285 3 322 305 38 61 chr10 90503501 90503714 -55085574 - HAL1 LINE L1 -75 2432 2225 3279 159 22 10 chr10 90503814 90504400 -55084888 + L1PA16 LINE L1 5565 6157 -9 201 234 0 31 chr10 90504604 90504620 -55084668 + (TAAA)n Simple_repeat Simple_repeat 1 16 -46 2406 98 0 0 chr10 90504620 90504926 -55084362 + AluSx SINE Alu 3 308 -4 201 234 0 31 chr10 90504926 90504973 -55084315 + (TAAA)n Simple_repeat Simple_repeat 16 62 0 737 165 59 12 chr10 90506511 90506681 -55082607 + MER53 DNA DNA 10 187 -2 1128 237 62 22 chr10 90506753 90507111 -55082177 + MLT1A2 LTR MaLR 3 374 0 2422 87 25 33 chr10 90507191 90507557 -55081731 + THE1B LTR MaLR 2 364 0 11884 90 3 4 chr10 90507558 90509139 -55080149 + THE1B-int LTR MaLR 2 1580 0 2381 125 8 19 chr10 90509139 90509507 -55079781 + THE1B LTR MaLR 1 364 0 195 125 0 0 chr10 90509847 90509887 -55079401 + (TG)n Simple_repeat Simple_repeat 2 41 0 2258 100 3 3 chr10 90510951 90511260 -55078028 - AluY SINE Alu -2 309 1 22 35 0 0 chr10 90511563 90511592 -55077696 + AT_rich Low_complexity Low_complexity 1 29 0 2343 107 0 0 chr10 90511961 90512270 -55077018 + AluSx SINE Alu 1 309 -3 2961 143 8 18 chr10 90512280 90512783 -55076505 - L1MA8 LINE L1 -269 6022 5525 1012 115 65 104 chr10 90512776 90513036 -55076252 + L1MA8 LINE L1 6042 6291 0 * 328 336 15 23 chr10 90513354 90513485 -55075803 + MIR SINE MIR 21 150 -112 410 265 228 0 chr10 90513504 90513666 -55075622 - MIR SINE MIR 0 262 64 236 296 37 65 chr10 90514246 90514354 -55074934 - MIR SINE MIR -107 155 51 425 306 58 0 chr10 90514382 90514555 -55074733 - L2 LINE L2 -2569 745 563 1421 195 47 10 chr10 90515614 90515911 -55073377 + AluJo SINE Alu 1 308 -4 236 149 21 0 chr10 90515912 90515959 -55073329 + GA-rich Low_complexity Low_complexity 1 48 0 3738 76 8 0 chr10 90516313 90516812 -55072476 + L1PA8 LINE L1 5669 6171 -1 188 320 0 0 chr10 90518775 90518825 -55070463 + L2 LINE L2 3215 3264 -8 328 351 0 0 chr10 90520862 90520996 -55068292 + T-rich Low_complexity Low_complexity 1 134 0 584 215 0 7 chr10 90521005 90521149 -55068139 + CT-rich Low_complexity Low_complexity 3 145 0 2004 121 35 3 chr10 90521424 90521713 -55067575 + AluSx SINE Alu 1 298 -14 271 372 48 7 chr10 90522048 90522193 -55067095 - L2 LINE L2 0 3272 3122 748 289 23 23 chr10 90522408 90522626 -55066662 - MIR SINE MIR -31 231 14 247 324 14 0 chr10 90522914 90522988 -55066300 + CT-rich Low_complexity Low_complexity 3 77 0 21 0 0 0 chr10 90523107 90523128 -55066160 + AT_rich Low_complexity Low_complexity 1 21 0 273 299 80 66 chr10 90524775 90524912 -55064376 + MIR3 SINE MIR 3 141 -67 1733 193 34 0 chr10 90525110 90525463 -55063825 - MLT1A1 LTR MaLR 0 365 1 392 348 39 0 chr10 90525581 90525762 -55063526 + MIR SINE MIR 74 261 -1 1752 176 10 10 chr10 90526748 90527055 -55062233 - AluJo SINE Alu -5 307 1 1628 176 0 20 chr10 90527674 90527969 -55061319 + AluJo SINE Alu 15 303 -9 362 259 91 74 chr10 90527982 90528324 -55060964 - L1ME4a LINE L1 -205 5916 5540 37 0 0 0 chr10 90528898 90528935 -55060353 + AT_rich Low_complexity Low_complexity 1 37 0 414 265 10 0 chr10 90529196 90529298 -55059990 + MER94 DNA DNA 1 103 -31 61 15 0 0 chr10 90529443 90529511 -55059777 + AT_rich Low_complexity Low_complexity 1 68 0 431 253 187 11 chr10 90529518 90529643 -55059645 - MIR SINE MIR 0 262 160 284 62 0 21 chr10 90529643 90529691 -55059597 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 431 253 187 11 chr10 90529691 90529747 -55059541 - MIR SINE MIR -102 160 49 22 35 0 0 chr10 90531665 90531694 -55057594 + AT_rich Low_complexity Low_complexity 1 29 0 289 314 39 51 chr10 90532750 90532906 -55056382 + L2 LINE L2 3159 3312 -1 23 0 0 0 chr10 90533046 90533069 -55056219 + AT_rich Low_complexity Low_complexity 1 23 0 330 290 194 39 chr10 90533070 90533349 -55055939 - L1MC4a LINE L1 -1621 6187 5866 280 275 153 59 chr10 90533357 90533468 -55055820 - L1MC4a LINE L1 -1927 5881 5782 1615 174 113 6 chr10 90533468 90533796 -55055492 + MLT1A1 LTR MaLR 1 363 -2 280 275 153 59 chr10 90533796 90534258 -55055030 - L1MC4a LINE L1 -2026 5782 5254 289 174 26 35 chr10 90534350 90534465 -55054823 + CT-rich Low_complexity Low_complexity 2 115 0 2098 137 0 0 chr10 90534532 90534825 -55054463 + AluSc SINE Alu 3 295 -14 29 0 0 0 chr10 90535157 90535186 -55054102 + AT_rich Low_complexity Low_complexity 1 29 0 253 399 87 0 chr10 90538291 90538429 -55050859 - L2 LINE L2 -268 3045 2896 248 163 33 98 chr10 90538490 90538582 -55050706 + MER94 DNA DNA 5 90 -44 187 135 0 0 chr10 90538627 90538664 -55050624 + L2 LINE L2 3277 3313 0 27 0 0 0 chr10 90538738 90538765 -55050523 + AT_rich Low_complexity Low_complexity 1 27 0 1411 180 42 92 chr10 90539831 90540231 -55049057 + MSTB1 LTR MaLR 1 380 -52 458 224 0 0 chr10 90540237 90540335 -55048953 + MSTB1 LTR MaLR 352 449 -8 22 0 0 0 chr10 90541539 90541561 -55047727 + AT_rich Low_complexity Low_complexity 1 22 0 258 259 148 0 chr10 90541864 90541999 -55047289 + L1 LINE L1 4903 5057 -1089 35 24 0 0 chr10 90542523 90542565 -55046723 + AT_rich Low_complexity Low_complexity 1 42 0 26 50 0 0 chr10 90542655 90542695 -55046593 + AT_rich Low_complexity Low_complexity 1 40 0 496 174 0 20 chr10 90542721 90543003 -55046285 - AluJb SINE Alu 0 312 217 895 153 7 7 chr10 90543003 90543153 -55046135 - AluJb SINE Alu -162 150 1 653 183 40 0 chr10 90543666 90543792 -55045496 + MSTC LTR MaLR 1 131 -297 336 338 68 51 chr10 90544036 90544347 -55044941 + L1M4 LINE L1 3769 4084 -2062 1162 206 24 10 chr10 90544595 90544887 -55044401 + MER33 DNA MER1_type 6 301 -23 1818 178 13 0 chr10 90544902 90545200 -55044088 - AluSx SINE Alu -10 302 1 1960 94 50 44 chr10 90545240 90545538 -55043750 - AluSx SINE Alu -12 300 1 22 35 0 0 chr10 90545541 90545570 -55043718 + AT_rich Low_complexity Low_complexity 1 29 0 205 155 35 0 chr10 90545706 90545764 -55043524 + GA-rich Low_complexity Low_complexity 1 60 0 227 91 0 23 chr10 90547856 90547900 -55041388 + (TA)n Simple_repeat Simple_repeat 2 44 0 393 269 88 58 chr10 90548327 90548691 -55040597 - HAL1 LINE L1 -1161 1346 972 234 0 0 0 chr10 90548737 90548763 -55040525 + (TC)n Simple_repeat Simple_repeat 1 26 0 367 324 82 59 chr10 90548767 90549023 -55040265 - HAL1 LINE L1 -1669 838 577 229 304 0 14 chr10 90549312 90549381 -55039907 - HAL1 LINE L1 -2438 69 2 25 51 0 0 chr10 90550332 90550371 -55038917 + AT_rich Low_complexity Low_complexity 1 39 0 181 135 0 54 chr10 90551008 90551045 -55038243 - L2 LINE L2 -1606 1708 1674 3348 202 55 40 chr10 90553016 90553166 -55036122 - L1MA9 LINE L1 -38 7295 7149 333 0 0 0 chr10 90553166 90553203 -55036085 + (TTCA)n Simple_repeat Simple_repeat 4 40 0 3348 202 55 40 chr10 90553203 90553568 -55035720 - L1MA9 LINE L1 -184 7149 6791 1645 204 10 0 chr10 90553568 90553862 -55035426 - AluJo SINE Alu -9 303 7 3348 202 55 40 chr10 90553862 90554490 -55034798 - L1MA9 LINE L1 -542 6791 6134 5120 214 15 97 chr10 90554491 90555678 -55033610 - L1MA9 LINE L1 -1947 5220 4243 2131 113 13 16 chr10 90555678 90555989 -55033299 - AluSx SINE Alu -2 310 1 5120 214 15 97 chr10 90555989 90556694 -55032594 - L1MA9 LINE L1 -2924 4243 3482 5054 269 21 46 chr10 90556701 90559147 -55030141 - L1MA9 LINE L1 -4172 2996 932 1936 128 55 33 chr10 90559147 90559514 -55029774 - THE1C LTR MaLR 0 375 1 5054 269 21 46 chr10 90559514 90560418 -55028870 - L1MA9 LINE L1 -6236 932 7 1132 256 105 47 chr10 90560435 90560590 -55028698 - L1MDb LINE L1 -5116 1293 1148 5294 53 6 0 chr10 90560590 90561250 -55028038 - L1PA7 LINE L1 -1 6153 5490 1132 256 105 47 chr10 90561250 90561664 -55027624 - L1MDb LINE L1 -5261 1148 691 816 303 7 29 chr10 90561831 90562138 -55027150 - L1MDb LINE L1 -6094 315 16 204 309 0 29 chr10 90562906 90562974 -55026314 + L2 LINE L2 2918 2983 -289 1533 188 36 84 chr10 90562975 90563390 -55025898 + MSTD LTR MaLR 1 395 -1 2822 233 25 14 chr10 90563394 90563554 -55025734 + MSTD-int LTR MaLR 3 160 -1575 15992 28 6 0 chr10 90563554 90566229 -55023059 + L1PA3 LINE L1 3472 6152 -3 252 0 0 0 chr10 90566229 90566257 -55023031 + (TTAAA)n Simple_repeat Simple_repeat 3 30 0 2822 233 25 14 chr10 90566257 90566807 -55022481 + MSTD-int LTR MaLR 159 722 -1013 2530 270 30 21 chr10 90566804 90567575 -55021713 + MSTD-int LTR MaLR 953 1730 -5 * 1441 232 36 3 chr10 90567605 90567937 -55021351 + MSTD LTR MaLR 54 396 0 2218 112 0 7 chr10 90569157 90569460 -55019828 + AluSx SINE Alu 6 306 -6 21 0 0 0 chr10 90569638 90569659 -55019629 + AT_rich Low_complexity Low_complexity 1 21 0 1905 204 108 14 chr10 90569659 90570338 -55018950 - L1MB8 LINE L1 -262 5916 5174 * 4394 240 54 66 chr10 90570322 90573098 -55016190 - L1M4c LINE L1 -3923 2902 17 387 295 94 41 chr10 90573173 90573492 -55015796 - L1MEd LINE L1 -1090 1400 974 25 0 0 0 chr10 90573509 90573534 -55015754 + AT_rich Low_complexity Low_complexity 1 25 0 2113 111 10 3 chr10 90573539 90573837 -55015451 - AluSp SINE Alu -5 308 9 531 301 114 30 chr10 90574433 90574732 -55014556 - MLT1I LTR MaLR -1 408 85 292 181 101 94 chr10 90576043 90576181 -55013107 - L1MA10 LINE L1 0 6334 6196 1325 178 159 14 chr10 90576376 90576809 -55012479 - LTR54B LTR ERV1 -2 496 1 226 167 42 0 chr10 90577634 90577682 -55011606 + GA-rich Low_complexity Low_complexity 3 52 0 240 320 183 39 chr10 90577968 90578565 -55010723 + L2 LINE L2 1935 2617 -697 22 0 0 0 chr10 90579490 90579512 -55009776 + AT_rich Low_complexity Low_complexity 1 22 0 190 176 0 29 chr10 90579936 90579970 -55009318 - MIR SINE MIR -8 254 222 * 202 343 14 14 chr10 90579942 90580012 -55009276 - L2 LINE L2 -19 3253 3184 2155 118 7 0 chr10 90580110 90580407 -55008881 + AluSq SINE Alu 1 299 -14 192 279 49 98 chr10 90580467 90580589 -55008699 + L3 LINE CR1 1442 1557 -20 183 329 51 0 chr10 90581381 90581460 -55007828 + MIR SINE MIR 173 255 -7 1652 158 6 76 chr10 90583508 90583837 -55005451 - AluJb SINE Alu -6 306 1 208 237 85 0 chr10 90584600 90584659 -55004629 + MIR SINE MIR 134 197 -65 3694 176 43 0 chr10 90584699 90585365 -55003923 + MER44D DNA MER2_type 2 568 -37 252 261 109 11 chr10 90585968 90586060 -55003228 - MER5A DNA MER1_type -80 109 9 24 0 0 0 chr10 90586309 90586333 -55002955 + AT_rich Low_complexity Low_complexity 1 24 0 189 364 68 8 chr10 90586585 90586703 -55002585 + MIR3 SINE MIR 69 193 -15 558 227 141 37 chr10 90588436 90588599 -55000689 + MER5A DNA MER1_type 10 189 0 24 32 0 0 chr10 90588695 90588726 -55000562 + AT_rich Low_complexity Low_complexity 1 31 0 35 54 0 0 chr10 90590202 90590258 -54999030 + AT_rich Low_complexity Low_complexity 1 56 0 476 259 88 37 chr10 90590880 90591174 -54998114 - L1M4 LINE L1 -845 5301 4993 2058 82 0 0 chr10 90591345 90591602 -54997686 + AluSq SINE Alu 1 257 -56 180 0 0 0 chr10 90591602 90591622 -54997666 + (A)n Simple_repeat Simple_repeat 1 20 0 216 355 32 24 chr10 90591623 90591747 -54997541 - L2 LINE L2 -685 2629 2505 585 278 91 88 chr10 90591838 90592212 -54997076 + L2 LINE L2 2938 3312 -1 378 309 146 18 chr10 90592963 90593128 -54996160 - MER5A DNA MER1_type 0 189 4 389 296 19 0 chr10 90593754 90593913 -54995375 + HAL1b LINE L1 419 580 -768 2343 126 0 0 chr10 90594070 90594380 -54994908 - AluSx SINE Alu -2 310 1 24 0 0 0 chr10 90595242 90595266 -54994022 + AT_rich Low_complexity Low_complexity 1 24 0 454 317 23 50 chr10 90595669 90595890 -54993398 - MIR SINE MIR -16 246 32 4890 160 101 57 chr10 90596498 90597613 -54991675 - MER52A LTR ERV1 0 1755 591 526 206 0 0 chr10 90597608 90597710 -54991578 - MER52A LTR ERV1 -1614 141 40 * 253 303 90 0 chr10 90598153 90598242 -54991046 - MIR SINE MIR -65 143 47 915 204 144 13 chr10 90598804 90599174 -54990114 - MER66A LTR ERV1 -40 438 97 21 36 0 0 chr10 90599861 90599889 -54989399 + AT_rich Low_complexity Low_complexity 1 28 0 245 303 0 11 chr10 90600328 90600417 -54988871 + MIR SINE MIR 67 154 -108 27 29 0 0 chr10 90600428 90600462 -54988826 + AT_rich Low_complexity Low_complexity 1 34 0 218 215 177 25 chr10 90601145 90601224 -54988064 + MIR SINE MIR 172 262 0 226 411 0 20 chr10 90602106 90602252 -54987036 + L2 LINE L2 2550 2692 -622 219 357 36 12 chr10 90602377 90602461 -54986827 + MER5A DNA MER1_type 61 146 -43 273 285 51 46 chr10 90602508 90602706 -54986582 + MIR SINE MIR 21 211 -51 306 231 0 77 chr10 90604444 90604535 -54984753 + LTR16A LTR ERVL 55 138 -312 274 310 112 0 chr10 90604576 90604692 -54984596 + LTR16A LTR ERVL 209 337 -113 3404 196 14 42 chr10 90604700 90605586 -54983702 - L1MB7 LINE L1 -19 6165 5320 1737 181 17 0 chr10 90605586 90605878 -54983410 - AluJo SINE Alu -15 297 1 3404 196 14 42 chr10 90605878 90606210 -54983078 - L1MB7 LINE L1 -864 5320 4980 227 319 52 43 chr10 90607021 90607137 -54982151 - MIR3 SINE MIR -3 205 89 2567 150 9 2 chr10 90607354 90607794 -54981494 + L1PA15 LINE L1 5720 6162 -3 21 0 0 0 chr10 90608070 90608091 -54981197 + AT_rich Low_complexity Low_complexity 1 21 0 254 170 57 0 chr10 90609259 90609312 -54979976 - MIR SINE MIR -119 143 88 244 228 127 13 chr10 90610997 90611076 -54978212 - MER103 DNA DNA -43 123 36 1977 113 8 0 chr10 90612390 90612656 -54976632 + AluSq SINE Alu 1 268 -45 464 227 111 82 chr10 90613296 90613639 -54975649 + L1ME4a LINE L1 5536 5888 -233 315 0 0 0 chr10 90613661 90613696 -54975592 + (TG)n Simple_repeat Simple_repeat 2 36 0 1524 196 60 6 chr10 90616822 90617139 -54972149 + MER58B DNA MER1_type 4 337 -4 615 146 0 9 chr10 90617445 90617555 -54971733 - MER2 DNA MER2_type -152 193 85 193 29 29 29 chr10 90617558 90617593 -54971695 + (TTTTTA)n Simple_repeat Simple_repeat 2 36 0 4877 45 2 15 chr10 90617598 90618215 -54971073 - L1PA4 LINE L1 -5 6150 5542 25 75 0 0 chr10 90619472 90619525 -54969763 + AT_rich Low_complexity Low_complexity 1 53 0 1957 127 81 35 chr10 90619651 90619997 -54969291 - THE1B LTR MaLR 0 364 3 21 36 0 0 chr10 90620498 90620526 -54968762 + AT_rich Low_complexity Low_complexity 1 28 0 994 250 16 8 chr10 90620737 90620993 -54968295 - L1MC4a LINE L1 -1193 6615 6358 291 240 78 95 chr10 90621068 90621247 -54968041 + L2 LINE L2 2964 3139 -174 241 195 61 73 chr10 90621265 90621347 -54967941 + MER104 DNA Tc2 19 99 -81 312 156 104 13 chr10 90621479 90621556 -54967732 - MLT1I LTR MaLR -28 381 298 236 303 73 37 chr10 90621586 90621695 -54967593 - MLT1J2 LTR MaLR -204 246 134 1536 246 30 24 chr10 90621743 90622206 -54967082 + MLT1C LTR MaLR 1 466 -1 2002 168 5 13 chr10 90622328 90622682 -54966606 - MLT2C1 LTR ERVL -51 346 1 1610 131 0 0 chr10 90622887 90623109 -54966179 + AluSx SINE Alu 60 281 -31 484 266 51 25 chr10 90623273 90623431 -54965857 - MLT1J2 LTR MaLR -284 166 5 218 240 40 0 chr10 90623434 90623484 -54965804 + L2 LINE L2 3213 3264 -49 377 259 12 0 chr10 90623490 90623571 -54965717 - MER44D DNA MER2_type 0 609 528 821 200 0 17 chr10 90623572 90623747 -54965541 - FRAM SINE Alu -7 169 1 1183 180 67 8 chr10 90623748 90623987 -54965301 - MER44D DNA MER2_type -86 523 1 935 226 59 30 chr10 90624023 90624373 -54964915 + MSTD LTR MaLR 1 396 0 506 333 64 41 chr10 90624444 90624931 -54964357 + L1M4 LINE L1 2130 2627 -3519 327 328 56 8 chr10 90625313 90625438 -54963850 + MIR SINE MIR 23 153 -109 2183 126 0 0 chr10 90625731 90626040 -54963248 + AluSx SINE Alu 1 309 -3 199 293 15 19 chr10 90626751 90626889 -54962399 - MER5A DNA MER1_type -1 188 1 471 279 34 39 chr10 90627750 90627958 -54961330 - MLT1J LTR MaLR -2 509 303 331 260 110 34 chr10 90628224 90628370 -54960918 - MIR SINE MIR -57 205 49 193 297 54 40 chr10 90628682 90628756 -54960532 + L2 LINE L2 3229 3303 -10 364 267 69 35 chr10 90628941 90629057 -54960231 - L2 LINE L2 -1 3312 3193 2764 110 2 5 chr10 90629084 90629483 -54959805 + THE1B-int LTR MaLR 1183 1580 0 2652 101 3 11 chr10 90629483 90629850 -54959438 + THE1B LTR MaLR 1 364 0 2135 188 29 5 chr10 90629850 90630265 -54959023 + MLT1C LTR MaLR 43 467 0 1017 265 70 47 chr10 90630270 90630903 -54958385 - L2 LINE L2 -91 3222 2563 477 271 108 38 chr10 90631727 90631967 -54957321 + MIR SINE MIR 6 262 0 1738 88 0 12 chr10 90633043 90633293 -54955995 + L1PA8 LINE L1 5918 6164 -8 247 200 0 0 chr10 90633338 90633383 -54955905 + MIR SINE MIR 98 142 -66 3514 191 4 11 chr10 90634070 90634822 -54954466 - L1 LINE L1 -1446 4700 3954 1864 155 7 10 chr10 90636232 90636523 -54952765 - AluJb SINE Alu -22 290 1 287 363 0 0 chr10 90637031 90637144 -54952144 - L2 LINE L2 -1 3312 3200 2326 102 3 6 chr10 90637288 90637601 -54951687 + AluSx SINE Alu 1 312 0 261 194 0 45 chr10 90639464 90639531 -54949757 + L3 LINE CR1 1324 1387 -190 2560 47 0 3 chr10 90639767 90640066 -54949222 - AluY SINE Alu -13 298 1 1128 146 111 0 chr10 90640474 90640700 -54948588 + L1MA8 LINE L1 6037 6287 -4 476 294 166 5 chr10 90641274 90641461 -54947827 + MIR SINE MIR 36 252 -10 243 61 0 0 chr10 90641952 90641985 -54947303 + (TG)n Simple_repeat Simple_repeat 2 34 0 214 184 0 0 chr10 90641994 90642032 -54947256 + GA-rich Low_complexity Low_complexity 2 39 0 26 0 0 0 chr10 90642092 90642118 -54947170 + AT_rich Low_complexity Low_complexity 1 26 0 469 289 89 17 chr10 90643220 90643455 -54945833 + LTR43 LTR ERV1 193 444 -158 4699 71 3 3 chr10 90643649 90644291 -54944997 - L1PA8 LINE L1 0 6172 5542 25 75 0 0 chr10 90645548 90645601 -54943687 + AT_rich Low_complexity Low_complexity 1 53 0 1004 99 119 0 chr10 90645726 90645877 -54943411 - THE1B LTR MaLR 0 364 196 30 0 0 0 chr10 90646144 90646174 -54943114 + AT_rich Low_complexity Low_complexity 1 30 0 392 276 30 8 chr10 90646194 90646328 -54942960 - L1 LINE L1 -2250 3896 3760 1712 183 0 7 chr10 90646566 90646892 -54942396 + AluJo SINE Alu 1 324 0 25 0 0 0 chr10 90646894 90646919 -54942369 + AT_rich Low_complexity Low_complexity 1 25 0 411 261 86 90 chr10 90646944 90647592 -54941696 + L1M4 LINE L1 2291 2937 -3209 2162 112 7 0 chr10 90647592 90647886 -54941402 + AluSc SINE Alu 1 296 -13 411 261 86 90 chr10 90647886 90647983 -54941305 + L1M4 LINE L1 2937 3033 -3113 261 194 0 45 chr10 90650416 90650483 -54938805 + L3 LINE CR1 1324 1387 -190 2440 69 0 3 chr10 90650719 90651022 -54938266 - AluY SINE Alu -9 302 1 3314 183 90 0 chr10 90651022 90651856 -54937432 - L1MC1 LINE L1 -359 5974 5073 6657 61 5 2 chr10 90652167 90653043 -54936245 - L1PA8 LINE L1 0 6172 5306 626 216 26 1 chr10 90653364 90653541 -54935747 + L1MB4 LINE L1 5923 6100 -80 329 47 0 0 chr10 90653547 90653590 -54935698 - MADE1 DNA Mariner -37 43 1 290 215 0 0 chr10 90653590 90653655 -54935633 + L1MB4 LINE L1 6099 6163 -17 192 313 31 16 chr10 90654175 90654239 -54935049 + MIR SINE MIR 85 149 -59 341 261 243 0 chr10 90655038 90655149 -54934139 + MIR SINE MIR 111 248 -14 411 390 138 13 chr10 90655874 90656397 -54932891 - L2 LINE L2 -2162 1152 565 594 292 113 68 chr10 90656397 90656822 -54932466 - MLT1J2 LTR MaLR -5 445 2 234 368 107 17 chr10 90656887 90657121 -54932167 - L2 LINE L2 -2835 479 225 2272 107 3 0 chr10 90658028 90658328 -54930960 - AluSx SINE Alu -11 301 1 2099 197 55 18 chr10 90658536 90658899 -54930389 - L1MC1 LINE L1 0 6333 5945 2290 67 0 3 chr10 90658899 90659254 -54930034 - AluY SINE Alu 0 354 1 2099 197 55 18 chr10 90659254 90659377 -54929911 - L1MC1 LINE L1 -388 5945 5828 1219 44 0 0 chr10 90659377 90659514 -54929774 - AluY SINE Alu -174 137 1 4348 222 52 6 chr10 90659514 90661594 -54927694 - L1MC1 LINE L1 -359 5974 3804 230 324 0 14 chr10 90662085 90662156 -54927132 - L2 LINE L2 -189 3083 3014 22 94 0 0 chr10 90663299 90663363 -54925925 + AT_rich Low_complexity Low_complexity 1 64 0 286 329 56 19 chr10 90663982 90664143 -54925145 - MIR SINE MIR -71 191 25 1558 213 3 3 chr10 90664703 90665004 -54924284 - AluJb SINE Alu -11 301 1 2058 124 13 3 chr10 90666088 90666394 -54922894 + AluSq SINE Alu 1 309 -4 192 319 134 25 chr10 90666599 90666718 -54922570 - L2 LINE L2 -5 3267 3136 2184 92 19 41 chr10 90666718 90667033 -54922255 - AluSq SINE Alu -5 308 1 378 322 157 26 chr10 90668114 90668603 -54920685 + L2 LINE L2 2700 3304 -9 2398 50 0 13 chr10 90668812 90669111 -54920177 - AluY SINE Alu -16 295 1 207 0 0 0 chr10 90669294 90669317 -54919971 + (T)n Simple_repeat Simple_repeat 1 23 0 597 220 85 17 chr10 90670033 90670210 -54919078 + MER53 DNA DNA 1 189 0 213 139 0 0 chr10 90671032 90671075 -54918213 + (TATG)n Simple_repeat Simple_repeat 2 44 0 267 309 41 10 chr10 90671947 90672044 -54917244 - MLT1E LTR MaLR -441 152 53 21 36 0 0 chr10 90672617 90672645 -54916643 + AT_rich Low_complexity Low_complexity 1 28 0 349 268 102 31 chr10 90672736 90672863 -54916425 + MIR SINE MIR 23 158 -104 209 303 144 48 chr10 90672928 90673116 -54916172 - L3 LINE CR1 -286 1291 1086 828 103 0 0 chr10 90675081 90675197 -54914091 - AluSq/x SINE Alu -197 116 1 1928 136 20 0 chr10 90675199 90675501 -54913787 - AluSx SINE Alu -4 308 1 195 329 53 0 chr10 90676504 90676580 -54912708 + L2 LINE L2 3193 3272 0 224 321 151 0 chr10 90677010 90677116 -54912172 - MIR SINE MIR -21 241 120 320 262 24 32 chr10 90677658 90677784 -54911504 + MER103 DNA DNA 1 125 -41 1339 286 105 18 chr10 90677898 90678849 -54910439 - L2 LINE L2 0 3313 2281 322 306 54 54 chr10 90679524 90679710 -54909578 - L1ME3A LINE L1 -8 6162 5977 521 261 123 84 chr10 90679822 90680320 -54908968 - L1ME3A LINE L1 -362 5808 5292 347 266 21 55 chr10 90680355 90680592 -54908696 - L1ME3A LINE L1 -1391 4755 4527 208 147 0 0 chr10 90680689 90680723 -54908565 + (TAAAAA)n Simple_repeat Simple_repeat 2 35 0 1138 298 65 18 chr10 90680756 90681478 -54907810 - L1ME3A LINE L1 -1631 4515 3760 1704 183 0 7 chr10 90681716 90682042 -54907246 + AluJo SINE Alu 1 324 0 25 0 0 0 chr10 90682044 90682069 -54907219 + AT_rich Low_complexity Low_complexity 1 25 0 451 268 88 79 chr10 90682094 90682742 -54906546 + L1M4 LINE L1 2291 2951 -3195 2177 109 7 0 chr10 90682742 90683036 -54906252 + AluSc SINE Alu 1 296 -13 451 268 88 79 chr10 90683036 90683298 -54905990 + L1M4 LINE L1 2951 3209 -2937 325 306 60 38 chr10 90683319 90683502 -54905786 + L1M4 LINE L1 3508 3694 -2452 260 269 90 13 chr10 90683503 90683659 -54905629 + L1M4 LINE L1 3750 3917 -2229 2369 66 0 20 chr10 90684285 90684590 -54904698 - AluY SINE Alu -8 303 5 281 333 18 0 chr10 90684690 90684804 -54904484 + MIR SINE MIR 125 240 -22 180 0 0 0 chr10 90686320 90686340 -54902948 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 2118 107 0 4 chr10 90686341 90686622 -54902666 - AluSx SINE Alu -32 280 1 782 263 142 0 chr10 90686867 90687114 -54902174 + LTR16C LTR ERVL 148 429 -62 373 316 12 53 chr10 90687163 90687334 -54901954 + MER115 DNA AcHobo 141 304 -389 228 273 0 0 chr10 90687440 90687495 -54901793 + Zaphod DNA AcHobo 3977 4031 0 2117 92 41 3 chr10 90687518 90687812 -54901476 - AluY SINE Alu -6 305 1 2348 154 55 0 chr10 90688705 90689102 -54900186 - MSTA LTR MaLR 0 428 10 537 310 31 26 chr10 90689395 90689590 -54899698 - MIR SINE MIR -21 241 46 788 201 67 58 chr10 90691050 90691373 -54897915 - LTR24B LTR ERV1 -3 525 220 235 203 31 16 chr10 90691603 90691667 -54897621 + (TATATG)n Simple_repeat Simple_repeat 4 68 0 599 144 10 0 chr10 90691667 90691764 -54897524 + Tigger2 DNA MER2_type 2 99 -2619 4231 151 19 11 chr10 90691770 90692487 -54896801 + Tigger2 DNA MER2_type 22 744 -1974 1326 167 28 8 chr10 90692553 90692804 -54896484 + Tigger2 DNA MER2_type 2463 2718 0 1530 109 41 0 chr10 90693027 90693248 -54896040 - MER30 DNA MER1_type 0 230 1 186 259 0 37 chr10 90696648 90696702 -54892586 - L2 LINE L2 -1 3312 3261 9995 146 20 9 chr10 90698260 90699885 -54889403 + Tigger4(Zombi) DNA MER2_type 1 1642 -1089 392 312 82 0 chr10 90700153 90700323 -54888965 - L1M4 LINE L1 -909 5237 5054 * 1641 229 65 20 chr10 90700316 90701370 -54887918 - L1MCb LINE L1 -2631 3933 2772 537 310 31 26 chr10 90701706 90701901 -54887387 + MIR SINE MIR 46 241 -21 2283 154 61 0 chr10 90702194 90702589 -54886699 + MSTA LTR MaLR 10 428 0 2299 77 3 13 chr10 90703482 90703781 -54885507 + AluY SINE Alu 1 296 -15 260 206 41 0 chr10 90703782 90703855 -54885433 - L1MCb LINE L1 -4308 2256 2181 3125 224 52 57 chr10 90703859 90705883 -54883405 - L1MCb LINE L1 -4459 2105 1 1545 225 3 3 chr10 90706710 90707003 -54882285 + AluJo SINE Alu 3 295 -17 2050 116 39 0 chr10 90707169 90707454 -54881834 - AluSx SINE Alu -16 296 1 253 105 0 0 chr10 90708473 90708511 -54880777 + (TG)n Simple_repeat Simple_repeat 1 38 0 306 195 0 0 chr10 90708511 90708588 -54880700 + (TA)n Simple_repeat Simple_repeat 2 78 0 331 330 63 28 chr10 90708797 90709046 -54880242 + MIR SINE MIR 3 258 -4 323 208 26 0 chr10 90709412 90709489 -54879799 + MER53 DNA DNA 111 189 0 429 20 0 0 chr10 90709601 90709651 -54879637 + (TG)n Simple_repeat Simple_repeat 2 51 0 417 280 38 8 chr10 90710533 90710665 -54878623 + L1MCa LINE L1 7 142 -6284 * 6553 190 42 32 chr10 90710658 90712147 -54877141 + L1MC3 LINE L1 6272 7775 -10 382 335 97 57 chr10 90713297 90714119 -54875169 + L2 LINE L2 2305 3272 0 1706 107 48 4 chr10 90714395 90714647 -54874641 + AluSx SINE Alu 43 305 -7 308 321 75 46 chr10 90715508 90715739 -54873549 - MIR SINE MIR -14 248 9 512 254 214 15 chr10 90715827 90716028 -54873260 + MIR SINE MIR 12 252 -10 1059 226 69 33 chr10 90716587 90716919 -54872369 - MER2 DNA MER2_type 0 344 1 21 0 0 0 chr10 90717837 90717858 -54871430 + AT_rich Low_complexity Low_complexity 1 21 0 6717 64 12 2 chr10 90717895 90719125 -54870163 - L1PA7 LINE L1 -6 6148 4906 713 204 173 0 chr10 90719185 90719347 -54869941 - MER58A DNA MER1_type -31 193 4 2043 117 27 0 chr10 90720145 90720443 -54868845 + AluSx SINE Alu 7 312 0 259 302 9 66 chr10 90721899 90722005 -54867283 + MIR SINE MIR 24 123 -139 239 242 32 0 chr10 90722456 90722518 -54866770 + MIR SINE MIR 104 167 -95 345 301 7 35 chr10 90723408 90723551 -54865737 + CT-rich Low_complexity Low_complexity 1 139 0 243 0 0 0 chr10 90723774 90723801 -54865487 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 24 53 0 0 chr10 90724307 90724345 -54864943 + AT_rich Low_complexity Low_complexity 1 38 0 339 167 0 0 chr10 90724419 90724473 -54864815 - MER74B LTR ERVL -31 591 538 * 979 235 14 5 chr10 90724467 90724680 -54864608 - MER74A LTR ERVL -343 215 1 364 282 61 66 chr10 90726066 90726491 -54862797 + L1MA8 LINE L1 5862 6284 -7 25 0 0 0 chr10 90726498 90726523 -54862765 + AT_rich Low_complexity Low_complexity 1 25 0 405 289 46 30 chr10 90726984 90727206 -54862082 - MIR SINE MIR -14 248 25 1604 199 41 39 chr10 90727240 90727628 -54861660 - MER57A LTR ERV1 -2 401 13 496 222 29 82 chr10 90727638 90727845 -54861443 + MER33 DNA MER1_type 42 237 -87 271 302 47 9 chr10 90728034 90728140 -54861148 - MER5B DNA MER1_type -68 110 1 2138 73 11 0 chr10 90729173 90729507 -54859781 - AluY SINE Alu 0 341 5 1736 189 90 47 chr10 90729936 90730292 -54858996 - MLT1C LTR MaLR -3 464 84 1834 212 11 0 chr10 90730292 90730651 -54858637 - MLT1A1 LTR MaLR -2 363 1 1736 189 90 47 chr10 90730651 90730739 -54858549 - MLT1C LTR MaLR -383 84 1 270 0 0 0 chr10 90731840 90731870 -54857418 + (TG)n Simple_repeat Simple_repeat 1 30 0 239 280 128 24 chr10 90733018 90733143 -54856145 - MIR SINE MIR -30 232 95 1994 221 24 21 chr10 90733228 90733653 -54855635 - MLT2B3 LTR ERVL -128 426 1 212 365 148 6 chr10 90733686 90733889 -54855399 - MIR SINE MIR -3 259 30 1459 162 53 118 chr10 90735261 90735675 -54853613 - MSTD LTR MaLR -9 387 1 190 353 12 12 chr10 90735866 90735951 -54853337 - L2 LINE L2 0 3272 3188 21 0 0 0 chr10 90736054 90736075 -54853213 + AT_rich Low_complexity Low_complexity 1 21 0 1998 133 0 0 chr10 90736110 90736395 -54852893 + AluSc SINE Alu 6 290 -19 204 363 39 29 chr10 90736616 90736718 -54852570 - L2 LINE L2 -592 2722 2620 4848 247 59 24 chr10 90736800 90739269 -54850019 - L1ME1 LINE L1 -12 6154 3600 24 0 0 0 chr10 90739316 90739340 -54849948 + AT_rich Low_complexity Low_complexity 1 24 0 1200 363 0 55 chr10 90739419 90739747 -54849541 + AluSx SINE Alu 1 310 -2 816 213 38 33 chr10 90739870 90740053 -54849235 + MER5A DNA MER1_type 6 189 0 710 359 89 31 chr10 90740134 90740901 -54848387 - L2 LINE L2 -1877 1437 627 1913 138 28 0 chr10 90742016 90742305 -54846983 + AluSx SINE Alu 1 297 -15 441 0 0 0 chr10 90742336 90742385 -54846903 + (TG)n Simple_repeat Simple_repeat 2 50 0 1276 190 42 10 chr10 90742736 90743025 -54846263 - L1MC3 LINE L1 -8 7777 7480 299 309 114 30 chr10 90743026 90743262 -54846026 - MIR SINE MIR -5 257 2 568 278 57 11 chr10 90744462 90744638 -54844650 + MIR SINE MIR 48 231 -31 230 174 43 0 chr10 90744715 90744761 -54844527 + CT-rich Low_complexity Low_complexity 3 50 0 27 0 0 0 chr10 90745375 90745402 -54843886 + AT_rich Low_complexity Low_complexity 1 27 0 1891 153 0 0 chr10 90746012 90746294 -54842994 + AluSx SINE Alu 1 282 -30 4421 215 26 92 chr10 90746561 90748124 -54841164 - L1MC3 LINE L1 -19 7766 6306 1911 260 37 34 chr10 90748134 90748723 -54840565 - L1MCb LINE L1 -5454 591 1 354 107 0 0 chr10 90749196 90749252 -54840036 + (GGGA)n Simple_repeat Simple_repeat 4 59 0 2023 127 47 42 chr10 90749339 90749700 -54839588 - THE1B LTR MaLR -1 363 1 216 283 22 0 chr10 90750407 90750499 -54838789 + (TA)n Simple_repeat Simple_repeat 2 95 0 225 280 103 41 chr10 90750556 90750799 -54838489 - L1MC3 LINE L1 -1985 5823 5566 825 207 67 0 chr10 90750861 90751025 -54838263 - FAM SINE Alu 0 175 1 2198 182 49 2 chr10 90751440 90751847 -54837441 - MSTB LTR MaLR 0 426 1 2199 129 0 0 chr10 90751995 90752298 -54836990 - AluSx SINE Alu -9 303 1 266 230 35 0 chr10 90752315 90752402 -54836886 - L1M4 LINE L1 -3671 2475 2386 22 56 0 0 chr10 90752418 90752454 -54836834 + AT_rich Low_complexity Low_complexity 1 36 0 298 309 0 0 chr10 90753096 90753177 -54836111 - MER117 DNA MER1_type -104 93 13 259 253 139 0 chr10 90753300 90753379 -54835909 - MIR SINE MIR -77 185 96 2244 113 0 0 chr10 90756609 90756911 -54832377 - AluSx SINE Alu -6 306 5 791 272 119 51 chr10 90757141 90757627 -54831661 + LTR33 LTR ERVL 3 521 0 2132 110 38 0 chr10 90757887 90758178 -54831110 + AluSq SINE Alu 1 302 -11 21 0 0 0 chr10 90758564 90758585 -54830703 + AT_rich Low_complexity Low_complexity 1 21 0 1159 60 0 0 chr10 90759064 90759213 -54830075 - AluY SINE Alu 0 311 163 252 0 0 0 chr10 90760724 90760752 -54828536 + (A)n Simple_repeat Simple_repeat 1 28 0 1553 179 11 0 chr10 90761513 90761776 -54827512 - MER47A DNA MER2_type -97 269 4 292 203 72 7 chr10 90761776 90761914 -54827374 + (TA)n Simple_repeat Simple_repeat 1 147 0 1996 142 13 7 chr10 90762165 90762475 -54826813 - AluSx SINE Alu 0 312 1 2068 125 7 0 chr10 90762968 90763255 -54826033 - AluSx SINE Alu -23 289 1 333 273 164 9 chr10 90765074 90765184 -54824104 - L2 LINE L2 0 3313 3187 22 35 0 0 chr10 90765437 90765466 -54823822 + AT_rich Low_complexity Low_complexity 1 29 0 654 340 83 16 chr10 90766849 90767522 -54821766 - L2 LINE L2 -16 3297 2576 21 57 0 0 chr10 90768595 90768630 -54820658 + AT_rich Low_complexity Low_complexity 1 35 0 258 105 0 0 chr10 90768916 90768954 -54820334 + (CA)n Simple_repeat Simple_repeat 1 38 0 22 0 0 0 chr10 90769265 90769287 -54820001 + AT_rich Low_complexity Low_complexity 1 22 0 307 239 72 124 chr10 90771833 90771941 -54817347 + MIR SINE MIR 41 134 -128 1764 173 10 13 chr10 90771941 90772242 -54817046 + AluJb SINE Alu 1 300 -12 307 239 72 124 chr10 90772242 90772342 -54816946 + MIR SINE MIR 134 238 -24 234 361 0 28 chr10 90773979 90774087 -54815201 - MIR SINE MIR -66 142 38 213 390 126 34 chr10 90775087 90775356 -54813932 - L3 LINE CR1 -733 844 551 294 306 70 25 chr10 90775550 90775707 -54813581 + MIR SINE MIR 34 197 -65 700 243 29 38 chr10 90776837 90777047 -54812241 + MIR SINE MIR 5 212 -50 183 204 0 0 chr10 90778378 90778422 -54810866 + (TG)n Simple_repeat Simple_repeat 1 44 0 270 0 0 0 chr10 90780295 90780325 -54808963 + (TG)n Simple_repeat Simple_repeat 1 30 0 1008 268 35 19 chr10 90781319 90781633 -54807655 + LTR16A LTR ERVL 132 450 0 348 358 37 5 chr10 90782654 90782841 -54806447 - MIR SINE MIR -49 213 21 2033 152 89 17 chr10 90782957 90783372 -54805916 + MER65A LTR ERV1 1 445 0 311 44 22 0 chr10 90783382 90783427 -54805861 + (TG)n Simple_repeat Simple_repeat 2 47 0 750 318 9 9 chr10 90783663 90783883 -54805405 + MIR SINE MIR 12 231 -31 186 429 0 0 chr10 90784830 90784900 -54804388 - L2 LINE L2 -5 3267 3198 483 202 168 0 chr10 90785845 90785964 -54803324 - MER67A LTR ERV1 0 543 405 281 172 0 0 chr10 90785978 90786036 -54803252 + L1 LINE L1 4181 4238 -1908 2772 96 2 35 chr10 90786036 90786493 -54802795 + LTR7 LTR ERV1 1 442 -8 873 243 65 14 chr10 90786500 90786854 -54802434 + L1 LINE L1 4233 4604 -1542 795 202 30 20 chr10 90787031 90787229 -54802059 + MER20 DNA MER1_type 1 200 -19 1413 89 6 0 chr10 90788052 90788232 -54801056 + AluSq SINE Alu 1 181 -132 228 135 0 0 chr10 90788577 90788614 -54800674 + (TTTA)n Simple_repeat Simple_repeat 4 40 0 449 349 62 24 chr10 90788617 90788958 -54800330 - L2 LINE L2 -599 2715 2362 1016 306 57 5 chr10 90789331 90789700 -54799588 - MLT1I LTR MaLR -13 396 9 202 301 103 64 chr10 90789713 90789869 -54799419 - MIR SINE MIR -53 209 48 1969 153 3 3 chr10 90790435 90790743 -54798545 + AluSg SINE Alu 1 308 -2 188 388 37 19 chr10 90791043 90791257 -54798031 - L2 LINE L2 -1648 1666 1449 2088 100 18 0 chr10 90791316 90791641 -54797647 + AluSq SINE Alu 1 330 0 225 326 78 54 chr10 90792265 90792507 -54796781 - L2 LINE L2 -2401 913 666 51 31 0 0 chr10 90793704 90793769 -54795519 + AT_rich Low_complexity Low_complexity 1 65 0 50 51 0 0 chr10 90794378 90794456 -54794832 + AT_rich Low_complexity Low_complexity 1 78 0 2253 97 3 3 chr10 90794609 90794907 -54794381 - AluSq SINE Alu -11 302 5 512 227 8 23 chr10 90795203 90795335 -54793953 + MLT1F1 LTR MaLR 1 130 -437 205 182 0 23 chr10 90795831 90795875 -54793413 + L2 LINE L2 3271 3313 0 193 367 43 22 chr10 90796009 90796148 -54793140 - L2 LINE L2 -205 3067 2926 282 295 127 42 chr10 90797158 90797324 -54791964 + MIR SINE MIR 4 183 -79 22924 81 6 4 chr10 90847479 90851443 -54737845 + L1PA7 LINE L1 2183 6154 0 261 268 54 0 chr10 90851907 90852019 -54737269 + L1MCc LINE L1 1384 1501 -4922 3168 183 15 32 chr10 90852121 90852278 -54737010 + MER54B LTR ERVL 204 362 -431 2472 75 21 0 chr10 90852278 90852612 -54736676 - L1PA8 LINE L1 -1 6171 5831 3168 183 15 32 chr10 90852612 90853054 -54736234 + MER54B LTR ERVL 362 793 0 828 298 77 29 chr10 90853054 90853967 -54735321 + L1MCc LINE L1 1635 2794 -4328 410 223 85 39 chr10 90854069 90854199 -54735089 - MLT1D LTR MaLR -369 136 1 4330 253 79 51 chr10 90854200 90854272 -54735016 + L1MCc LINE L1 3010 3078 -3863 1407 173 141 32 chr10 90854272 90854585 -54734703 - MER7A DNA MER2_type 0 346 2 4330 253 79 51 chr10 90854585 90855991 -54733297 + L1MCc LINE L1 3078 4590 -2351 1819 174 3 3 chr10 90855991 90856289 -54732999 + AluJb SINE Alu 1 298 -14 4330 253 79 51 chr10 90856289 90857289 -54731999 + L1MCc LINE L1 4590 5560 -1381 1433 134 167 48 chr10 90858090 90858425 -54730863 + THE1C LTR MaLR 1 375 0 575 206 185 27 chr10 90858772 90858918 -54730370 + MER5A DNA MER1_type 2 170 -19 209 368 0 0 chr10 90859000 90859087 -54730201 + MIR3 SINE MIR 86 172 -36 511 284 93 9 chr10 90859096 90859321 -54729967 - MIR SINE MIR -10 252 9 223 338 56 48 chr10 90859893 90860124 -54729164 + L2 LINE L2 2367 2599 -715 733 243 5 53 chr10 90860226 90860415 -54728873 - MLT1E2 LTR MaLR 0 626 447 186 150 0 0 chr10 90860819 90860859 -54728429 + L2 LINE L2 3016 3055 -217 910 242 42 47 chr10 90860990 90861408 -54727880 - MLT2B1 LTR ERVL 0 520 15 259 262 33 0 chr10 90861461 90861522 -54727766 + L2 LINE L2 3205 3267 -5 252 157 12 24 chr10 90861957 90862040 -54727248 + CT-rich Low_complexity Low_complexity 3 84 0 258 278 33 11 chr10 90862733 90862823 -54726465 - MIR3 SINE MIR -4 204 113 17430 197 36 10 chr10 90864219 90864425 -54724863 + L1PA13 LINE L1 1 200 -6614 1104 86 8 1 chr10 90864425 90864599 -54724689 + L1PA5 LINE L1 5981 6154 0 17430 197 36 10 chr10 90864599 90865547 -54723741 + L1PA13 LINE L1 200 1121 -5693 198 103 0 0 chr10 90865547 90865576 -54723712 + (CTG)n Simple_repeat Simple_repeat 1 29 0 17430 197 36 10 chr10 90865576 90871026 -54718262 + L1PA13 LINE L1 1121 6811 -3 494 310 64 11 chr10 90871213 90871400 -54717888 - MIR SINE MIR -12 250 54 351 0 0 0 chr10 90873072 90873111 -54716177 + (CA)n Simple_repeat Simple_repeat 1 39 0 494 148 30 10 chr10 90873346 90873447 -54715841 - L1MA5 LINE L1 -2 6298 6196 326 219 0 0 chr10 90874158 90874236 -54715052 + MER6B DNA MER2_type 53 130 -146 * 1918 170 26 3 chr10 90874232 90874621 -54714667 + MER6B DNA MER2_type 351 159 -117 827 253 6 0 chr10 90874623 90874797 -54714491 + FAM SINE Alu 1 175 -10 670 177 0 15 chr10 90874797 90874927 -54714361 + MER6B DNA MER2_type 149 210 0 185 258 0 65 chr10 90876188 90876250 -54713038 - L2 LINE L2 -213 3059 3002 2268 170 34 17 chr10 90876337 90876755 -54712533 + MSTA LTR MaLR 2 426 -2 243 316 18 61 chr10 90877039 90877153 -54712135 + L3 LINE CR1 952 1060 -517 274 272 49 0 chr10 90877177 90877258 -54712030 + MER5A DNA MER1_type 28 112 -77 1934 93 4 0 chr10 90877273 90877531 -54711757 + AluY SINE Alu 53 311 0 288 308 68 15 chr10 90879032 90879165 -54710123 - MIR SINE MIR -30 232 93 568 169 17 105 chr10 90879388 90879560 -54709728 - MER20 DNA MER1_type -46 173 17 267 313 12 0 chr10 90879751 90879834 -54709454 - MIR SINE MIR -122 140 57 342 261 25 0 chr10 90880228 90880347 -54708941 + MLT1L LTR MaLR 488 609 -6 21 0 0 0 chr10 90880597 90880618 -54708670 + AT_rich Low_complexity Low_complexity 1 21 0 667 249 12 18 chr10 90880622 90880787 -54708501 - MIR SINE MIR 0 262 99 391 371 66 14 chr10 90880911 90881289 -54707999 - L1ME LINE L1 -402 5760 5354 3610 96 0 0 chr10 90881800 90882333 -54706955 + L1PA7 LINE L1 4441 4973 -1173 6886 65 5 0 chr10 90882438 90883451 -54705837 + L1PA7 LINE L1 5131 6147 -7 195 321 0 0 chr10 90883555 90883611 -54705677 - L2 LINE L2 -399 2914 2859 481 284 147 26 chr10 90884065 90884297 -54704991 - MIR SINE MIR 0 262 3 573 245 7 0 chr10 90884804 90884947 -54704341 - L1PA16 LINE L1 -16 6150 6007 23 0 0 0 chr10 90884996 90885019 -54704269 + AT_rich Low_complexity Low_complexity 1 23 0 219 69 0 0 chr10 90885029 90885058 -54704230 + (CA)n Simple_repeat Simple_repeat 2 30 0 356 296 43 37 chr10 90885509 90885671 -54703617 + L1M4 LINE L1 4110 4272 -1874 2063 262 108 16 chr10 90885839 90886541 -54702747 + L1MDa LINE L1 3 769 -5771 730 233 0 90 chr10 90886610 90886799 -54702489 - FAM SINE Alu -3 172 1 498 259 93 0 chr10 90886802 90886879 -54702409 + L1MDa LINE L1 910 978 -5562 351 0 0 0 chr10 90886879 90886918 -54702370 + (CA)n Simple_repeat Simple_repeat 2 40 0 498 259 93 0 chr10 90886918 90886979 -54702309 + L1MDa LINE L1 978 1061 -5479 2567 236 93 15 chr10 90886981 90887252 -54702036 + L1MDa LINE L1 1095 1344 -5196 270 0 0 0 chr10 90887252 90887282 -54702006 + (TG)n Simple_repeat Simple_repeat 1 30 0 * 282 29 0 0 chr10 90887281 90887316 -54701972 + (GA)n Simple_repeat Simple_repeat 1 35 0 2567 236 93 15 chr10 90887282 90888113 -54701175 + L1MDa LINE L1 1344 2246 -4294 3785 89 2 3 chr10 90888162 90888756 -54700532 - L1P LINE L1 -2650 3496 2904 349 358 5 42 chr10 90888962 90889120 -54700168 + LTR33 LTR ERVL 30 181 -340 2059 146 0 0 chr10 90889120 90889415 -54699873 - AluSx SINE Alu -13 299 5 349 358 5 42 chr10 90889415 90889449 -54699839 + LTR33 LTR ERVL 181 215 -306 870 263 75 31 chr10 90889656 90889975 -54699313 - MLT1H1 LTR MaLR -9 546 214 466 219 10 0 chr10 90890092 90890188 -54699100 - MLT1H1 LTR MaLR -541 113 17 406 256 14 108 chr10 90890214 90890491 -54698797 - MLT1E3-int LTR MaLR -14 1357 1107 265 329 45 19 chr10 90890761 90890916 -54698372 - MLT1E3-int LTR MaLR -475 896 738 1056 278 52 22 chr10 90891004 90891464 -54697824 + MER74B LTR ERVL 74 547 -75 327 211 56 0 chr10 90891387 90891477 -54697811 - MER88 LTR ERVL -291 173 79 * 1010 257 29 13 chr10 90891593 90891900 -54697388 - MLT1E3-int LTR MaLR -761 610 299 2403 107 0 0 chr10 90891906 90892215 -54697073 + AluSq SINE Alu 1 309 -4 408 86 0 0 chr10 90892215 90892273 -54697015 + THE1-int LTR MaLR 494 551 -1029 226 274 49 20 chr10 90892278 90892380 -54696908 - MLT1E3-int LTR MaLR -1231 140 36 1253 237 115 37 chr10 90892393 90892828 -54696460 - MLT1E3 LTR MaLR 0 624 156 246 259 35 12 chr10 90892828 90892913 -54696375 - MLT1-int LTR MaLR -37 1334 1248 2116 139 0 0 chr10 90893321 90893622 -54695666 + AluSx SINE Alu 1 301 -11 3504 167 65 34 chr10 90893710 90894663 -54694625 + MER11C LTR ERVK 1 1071 0 2004 194 75 7 chr10 90894688 90895125 -54694163 - MLT1C LTR MaLR 0 467 1 1994 133 130 36 chr10 90895188 90895340 -54693948 + MSTA LTR MaLR 1 137 -291 2138 94 49 0 chr10 90895340 90895626 -54693662 - AluSx SINE Alu -12 300 1 1994 133 130 36 chr10 90895626 90895864 -54693424 + MSTA LTR MaLR 137 428 0 481 243 208 41 chr10 90896470 90896811 -54692477 - MLT1H1 LTR MaLR 0 555 158 1026 311 33 5 chr10 90897116 90897483 -54691805 + L1M2 LINE L1 1 377 -6472 699 168 0 24 chr10 90897483 90897608 -54691680 - AluSg/x SINE Alu -70 240 119 762 155 7 40 chr10 90897619 90897767 -54691521 - FLAM_C SINE Alu 0 143 1 427 358 47 9 chr10 90898086 90898318 -54690970 + L1MEc LINE L1 34 274 -6122 303 252 101 62 chr10 90898416 90898952 -54690336 + L1MEc LINE L1 666 1223 -4982 728 270 121 35 chr10 90898972 90899864 -54689424 + L1MEc LINE L1 2861 3829 -2386 241 324 9 9 chr10 90899872 90899977 -54689311 + (CATA)n Simple_repeat Simple_repeat 2 106 0 767 274 80 2 chr10 90900094 90900532 -54688756 + L1MEc LINE L1 4169 4640 -1575 636 275 97 39 chr10 90900576 90900937 -54688351 + L1MEc LINE L1 4719 5108 -1107 1054 163 5 33 chr10 90900937 90901152 -54688136 + MER3 DNA MER1_type 1 209 0 636 275 97 39 chr10 90901152 90901201 -54688087 + L1MEc LINE L1 5108 5153 -1062 11314 124 18 24 chr10 90901208 90903666 -54685622 + L1P3 LINE L1 1 2482 -3979 13310 119 10 17 chr10 90903767 90905973 -54683315 - L1P LINE L1 -3332 2814 623 584 125 0 0 chr10 90905971 90906059 -54683229 - L1P LINE L1 -6048 98 11 * 499 151 0 0 chr10 90906062 90906135 -54683153 - AluS SINE Alu -239 73 1 1702 265 92 18 chr10 90906184 90907158 -54682130 + L1M4 LINE L1 3192 4238 -1908 2309 103 3 7 chr10 90907167 90907477 -54681811 + AluSq SINE Alu 1 309 -4 1899 177 22 85 chr10 90907577 90907898 -54681390 + L1MD1 LINE L1 5581 5856 -386 1466 127 51 14 chr10 90907898 90908174 -54681114 + L1MA1 LINE L1 6017 6302 0 1899 177 22 85 chr10 90908174 90908395 -54680893 + L1MD1 LINE L1 5856 6089 -153 1522 188 0 27 chr10 90908484 90908777 -54680511 + AluJb SINE Alu 1 285 -27 234 0 0 0 chr10 90908885 90908911 -54680377 + (CA)n Simple_repeat Simple_repeat 1 26 0 186 73 73 0 chr10 90908911 90908952 -54680336 + (TA)n Simple_repeat Simple_repeat 2 45 0 35 41 0 0 chr10 90909521 90909570 -54679718 + AT_rich Low_complexity Low_complexity 1 49 0 494 296 13 7 chr10 90909819 90909971 -54679317 - MIR SINE MIR -5 257 105 395 318 108 10 chr10 90910037 90910333 -54678955 - L1MC4a LINE L1 -1954 5854 5530 225 0 0 0 chr10 90911117 90911142 -54678146 + (TG)n Simple_repeat Simple_repeat 1 25 0 354 246 57 29 chr10 90912432 90912607 -54676681 + LTR16A1 LTR ERVL 266 445 -12 1373 169 4 0 chr10 90912717 90912984 -54676304 + L1MA4 LINE L1 6022 6289 -11 1411 191 64 28 chr10 90913599 90913929 -54675359 - AluJb SINE Alu 0 340 1 252 259 17 0 chr10 90915058 90915116 -54674172 + (CATA)n Simple_repeat Simple_repeat 3 61 0 341 289 53 42 chr10 90915116 90915306 -54673982 + L1MC4a LINE L1 5679 5870 -1938 1970 150 10 0 chr10 90915318 90915618 -54673670 + AluSx SINE Alu 1 303 -9 42 20 0 0 chr10 90915720 90915769 -54673519 + AT_rich Low_complexity Low_complexity 1 49 0 2388 76 7 10 chr10 90916107 90916410 -54672878 + AluSx SINE Alu 1 302 -10 313 339 23 12 chr10 90916416 90916587 -54672701 + L1M4 LINE L1 2702 2874 -3272 194 0 0 37 chr10 90916589 90916616 -54672672 + (CAAAAA)n Simple_repeat Simple_repeat 5 30 0 325 151 27 14 chr10 90917594 90917667 -54671621 - MLT1H LTR MaLR -5 544 471 2358 84 3 3 chr10 90917889 90918198 -54671090 - AluSq SINE Alu -4 309 1 1716 254 140 25 chr10 90919025 90919603 -54669685 + L1MC4a LINE L1 6846 7557 -251 6963 168 30 12 chr10 90919603 90920934 -54668354 + L1PA13 LINE L1 4043 5421 -742 2003 131 34 0 chr10 90920934 90921231 -54668057 + AluSq SINE Alu 1 307 -6 6963 168 30 12 chr10 90921231 90921986 -54667302 + L1PA13 LINE L1 5421 6161 -2 1716 254 140 25 chr10 90921986 90922271 -54667017 + L1MC4a LINE L1 7557 7808 0 468 336 44 23 chr10 90922283 90922625 -54666663 + L1MC/D LINE L1 5420 5768 -2040 765 257 42 8 chr10 90922844 90923085 -54666203 + MIR SINE MIR 13 261 -1 224 268 98 36 chr10 90924337 90924449 -54664839 - MIR SINE MIR -56 206 88 3692 157 56 39 chr10 90924580 90925352 -54663936 + LTR1 LTR ERV1 1 785 0 294 270 60 20 chr10 90925432 90925532 -54663756 - MER5A DNA MER1_type -80 109 6 222 274 68 14 chr10 90925987 90926060 -54663228 + MIR3 SINE MIR 105 181 -27 504 237 42 8 chr10 90927443 90927561 -54661727 + MIR SINE MIR 27 148 -114 551 136 0 0 chr10 90927564 90927645 -54661643 + AluJ/FLAM SINE Alu 3 83 -229 224 315 0 0 chr10 90927991 90928045 -54661243 - L2 LINE L2 0 3272 3219 237 65 0 0 chr10 90928510 90928541 -54660747 + (TTTTA)n Simple_repeat Simple_repeat 2 32 0 1507 158 0 90 chr10 90928543 90928853 -54660435 - AluJo SINE Alu -30 282 1 21 0 0 0 chr10 90929429 90929450 -54659838 + AT_rich Low_complexity Low_complexity 1 21 0 238 167 0 0 chr10 90930479 90930521 -54658767 + MLT1J LTR MaLR 405 446 -65 192 367 63 0 chr10 90932449 90932528 -54656760 - MIR SINE MIR -147 115 32 213 305 76 17 chr10 90934592 90934710 -54654578 - L2 LINE L2 -9 3304 3180 268 384 89 30 chr10 90934825 90935127 -54654161 - L2 LINE L2 -2694 620 301 1674 182 54 0 chr10 90935129 90935425 -54653863 + AluJb SINE Alu 1 312 0 260 275 46 0 chr10 90936129 90936238 -54653050 + MER103 DNA DNA 46 159 -7 799 243 37 28 chr10 90936597 90936811 -54652477 + MER58A DNA MER1_type 6 221 -3 204 194 0 0 chr10 90937162 90937198 -54652090 + (CA)n Simple_repeat Simple_repeat 2 37 0 217 211 10 10 chr10 90937439 90937543 -54651745 + (TA)n Simple_repeat Simple_repeat 2 105 0 28 0 0 0 chr10 90938442 90938470 -54650818 + AT_rich Low_complexity Low_complexity 1 28 0 1847 166 95 26 chr10 90938479 90938900 -54650388 + LTR7 LTR ERV1 1 450 0 424 379 33 8 chr10 90939429 90939669 -54649619 - MIR SINE MIR -11 251 6 49 52 0 0 chr10 90940127 90940204 -54649084 + AT_rich Low_complexity Low_complexity 1 77 0 2400 69 7 0 chr10 90940329 90940632 -54648656 - AluY SINE Alu -6 305 1 2890 233 70 26 chr10 90941030 90942122 -54647166 - L1ME1 LINE L1 -5 6161 4983 6100 149 86 25 chr10 90942122 90943348 -54645940 + HSMAR2 DNA Mariner 2 1302 0 2890 233 70 26 chr10 90943348 90943647 -54645641 - L1ME1 LINE L1 -1183 4983 4699 5513 126 18 18 chr10 90943663 90943692 -54645596 - L1M1 LINE L1 -3850 3715 3687 3702 92 9 31 chr10 90943692 90944271 -54645017 - L1MA1 LINE L1 0 6302 5737 5513 126 18 18 chr10 90944271 90945242 -54644046 - L1M1 LINE L1 -3878 3687 2710 * 13334 182 22 14 chr10 90945213 90945253 -54644035 - L1M1 LINE L1 -5098 2467 2429 1776 162 35 0 chr10 90945253 90945543 -54643745 - AluSg SINE Alu -8 302 3 13334 182 22 14 chr10 90945543 90947936 -54641352 - L1M1 LINE L1 -5136 2429 15 201 171 0 0 chr10 90947961 90947996 -54641292 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 801 235 45 22 chr10 90948002 90948270 -54641018 + L1MD3 LINE L1 7713 7986 -9 642 341 63 35 chr10 90949063 90949251 -54640037 + MERVL LTR ERVL 3761 3942 -1813 2102 137 131 8 chr10 90949251 90949632 -54639656 - MSTA LTR MaLR 0 428 1 642 341 63 35 chr10 90949632 90950292 -54638996 + MERVL LTR ERVL 3942 4675 -1080 376 306 0 22 chr10 90950875 90951009 -54638279 + LTR16A LTR ERVL 20 150 -300 381 236 73 65 chr10 90951060 90951183 -54638105 + MER63 DNA MER1_type 713 1060 0 2071 141 16 37 chr10 90951668 90952051 -54637237 + THE1C LTR MaLR 1 375 0 854 232 24 10 chr10 90952688 90952895 -54636393 - MER6B DNA MER2_type 0 210 1 291 290 148 12 chr10 90953135 90953297 -54635991 - MIR SINE MIR 0 262 79 204 317 114 0 chr10 90953303 90953426 -54635862 + L2 LINE L2 2077 2213 -1101 1332 236 98 14 chr10 90953432 90953788 -54635500 - MLT1F LTR MaLR -4 538 153 1314 259 48 20 chr10 90953796 90954148 -54635140 + MLT2D LTR ERVL 5 366 -48 232 61 30 0 chr10 90954216 90954249 -54635039 + MLT2D LTR ERVL 364 397 0 552 327 0 0 chr10 90954249 90954402 -54634886 - MLT1F LTR MaLR -389 153 1 780 306 47 49 chr10 90954402 90954788 -54634500 + L2 LINE L2 2216 2600 -714 1545 235 96 32 chr10 90955642 90956174 -54633114 - MLT1F1 LTR MaLR 0 567 2 594 327 62 0 chr10 90956379 90956590 -54632698 + MIR SINE MIR 13 236 -26 252 100 0 0 chr10 90956594 90956634 -54632654 + (TTA)n Simple_repeat Simple_repeat 3 42 0 225 300 17 0 chr10 90956715 90956775 -54632513 - L2 LINE L2 -43 3270 3210 1881 163 7 0 chr10 90956946 90957253 -54632035 + AluJo SINE Alu 1 309 -3 248 239 57 80 chr10 90957312 90957400 -54631888 + MIR SINE MIR 63 148 -60 21 36 0 0 chr10 90957578 90957606 -54631682 + AT_rich Low_complexity Low_complexity 1 28 0 424 313 112 13 chr10 90957787 90958020 -54631268 - MIR SINE MIR 0 262 7 3632 107 2 6 chr10 90958102 90958615 -54630673 - MER9 LTR ERVK 0 511 1 199 319 28 14 chr10 90959583 90959655 -54629633 + L2 LINE L2 3236 3308 -5 363 299 32 113 chr10 90960807 90960869 -54628419 + HAL1 LINE L1 830 895 -1612 2511 58 0 16 chr10 90960869 90961178 -54628110 + AluY SINE Alu 1 304 -7 363 299 32 113 chr10 90961178 90961399 -54627889 + HAL1 LINE L1 895 1090 -1417 21 36 0 0 chr10 90961714 90961742 -54627546 + AT_rich Low_complexity Low_complexity 1 28 0 241 133 22 22 chr10 90962301 90962346 -54626942 + MIR SINE MIR 10 54 -208 1340 201 10 113 chr10 90962354 90962771 -54626517 - MLT1A2 LTR MaLR 0 374 1 516 274 65 13 chr10 90962772 90962925 -54626363 + MIR SINE MIR 100 260 -2 211 274 152 78 chr10 90963605 90963706 -54625582 - MIR SINE MIR -3 259 167 2395 84 0 0 chr10 90963706 90964004 -54625284 - AluSp SINE Alu -15 298 1 211 274 152 78 chr10 90964004 90964132 -54625156 - MIR SINE MIR -95 167 13 305 160 0 0 chr10 90965722 90965772 -54623516 - L1MC3 LINE L1 -1216 6569 6520 1144 151 11 16 chr10 90965774 90965959 -54623329 + MER4D LTR ERV1 1 184 -688 * 2872 166 102 4 chr10 90965955 90966484 -54622804 + MER4D LTR ERV1 323 903 0 3201 229 40 40 chr10 90966484 90966835 -54622453 - L1MC3 LINE L1 -1264 6521 6171 252 0 0 0 chr10 90966835 90966863 -54622425 + (TA)n Simple_repeat Simple_repeat 2 29 0 3201 229 40 40 chr10 90966863 90967172 -54622116 - L1MC3 LINE L1 -1614 6171 5858 2355 92 0 7 chr10 90967172 90967475 -54621813 + AluY SINE Alu 1 301 -10 3201 229 40 40 chr10 90967475 90967742 -54621546 - L1MC3 LINE L1 -1926 5859 5593 1038 203 148 41 chr10 90967753 90968043 -54621245 + MLT1A1 LTR MaLR 1 321 -44 3360 269 55 31 chr10 90968048 90971848 -54617440 - L1MCb LINE L1 -2510 4054 1 9888 161 10 8 chr10 90971884 90974465 -54614823 - L1PA13 LINE L1 -5 6158 3554 893 177 0 0 chr10 90974467 90974625 -54614663 - L1PA13 LINE L1 -3884 2262 2105 814 159 0 12 chr10 90976144 90976307 -54612981 - L1P LINE L1 -3635 2511 2351 698 304 50 55 chr10 90976574 90976936 -54612352 + L2 LINE L2 2240 2599 -715 33 25 0 0 chr10 90976996 90977036 -54612252 + AT_rich Low_complexity Low_complexity 1 40 0 1299 282 53 28 chr10 90977178 90977745 -54611543 - HsTC2 DNA Tc2 -1317 581 1 245 236 18 0 chr10 90978065 90978120 -54611168 + MER94 DNA DNA 2 57 -77 30 45 0 0 chr10 90978263 90978307 -54610981 + AT_rich Low_complexity Low_complexity 1 44 0 2106 170 12 117 chr10 90978316 90978904 -54610384 + L1P LINE L1 4836 5361 -785 340 113 0 0 chr10 90978905 90978958 -54610330 + L1PA13 LINE L1 6101 6153 -10 32 0 0 0 chr10 90979065 90979097 -54610191 + AT_rich Low_complexity Low_complexity 1 32 0 820 241 146 5 chr10 90979177 90979588 -54609700 + MER114 LTR ERV 48 516 -132 303 318 39 45 chr10 90980522 90980701 -54608587 - L1M4 LINE L1 -2040 4106 3929 1256 176 56 15 chr10 90980948 90981432 -54607856 - MER34B LTR ERV1 -6 559 1 313 363 81 5 chr10 90981857 90982080 -54607208 - L1M4 LINE L1 -2309 3837 3598 2244 209 35 26 chr10 90983111 90983571 -54605717 + MLT2B2 LTR ERVL 1 464 -51 253 290 0 11 chr10 90983576 90983669 -54605619 + (TA)n Simple_repeat Simple_repeat 2 93 0 229 146 0 0 chr10 90983669 90983710 -54605578 - MLT2B2 LTR ERVL -61 454 414 219 114 0 0 chr10 90983855 90983890 -54605398 + (CA)n Simple_repeat Simple_repeat 2 36 0 285 29 0 0 chr10 90983908 90983942 -54605346 + (TG)n Simple_repeat Simple_repeat 2 35 0 347 48 0 0 chr10 90983942 90983984 -54605304 + MLT2B2 LTR ERVL 479 520 0 236 290 279 0 chr10 90984289 90984488 -54604800 - MIR3 SINE MIR 0 262 1 1792 171 51 18 chr10 90986278 90986612 -54602676 - MER7A DNA MER2_type -1 345 3 251 273 30 81 chr10 90986678 90986777 -54602511 - L2 LINE L2 -42 3230 3137 204 296 30 89 chr10 90986896 90987065 -54602223 - L2 LINE L2 -180 3092 2934 284 273 25 122 chr10 90987121 90987291 -54601997 + L2 LINE L2 3099 3241 -72 718 192 8 8 chr10 90987291 90987421 -54601867 - FLAM_A SINE Alu -3 130 1 284 273 25 122 chr10 90987421 90987488 -54601800 + L2 LINE L2 3241 3313 0 241 410 28 0 chr10 90987468 90987612 -54601676 - L2 LINE L2 -440 2874 2727 * 296 252 143 17 chr10 90988143 90988262 -54601026 - MIR SINE MIR -6 256 123 263 279 15 0 chr10 90988371 90988439 -54600849 + GA-rich Low_complexity Low_complexity 1 69 0 2006 178 5 22 chr10 90988871 90989242 -54600046 - MLT1A1 LTR MaLR 0 365 1 387 168 262 7 chr10 90989540 90989689 -54599599 + MER53 DNA DNA 1 187 -2 14174 192 67 59 chr10 90990562 90994473 -54594815 - LTR28-int LTR ERV1 -2906 4185 180 299 175 62 38 chr10 90994504 90994584 -54594704 - LTR28-int LTR ERV1 -7004 87 6 503 259 9 9 chr10 90994587 90994703 -54594585 - LTR28 LTR ERV1 0 1020 905 1445 222 83 118 chr10 90994731 90995565 -54593723 - LTR1B LTR ERV1 -17 1003 1 445 319 99 5 chr10 90995672 90995863 -54593425 - MER90 LTR ERV1 -18 557 349 275 226 16 65 chr10 90995864 90995988 -54593300 - LTR65 LTR ERV1 -549 120 3 22 35 0 0 chr10 90996638 90996667 -54592621 + AT_rich Low_complexity Low_complexity 1 29 0 1695 160 74 3 chr10 90997257 90997582 -54591706 - MER7A DNA MER2_type 0 346 1 2119 173 91 12 chr10 90998302 90998730 -54590558 - MER88 LTR ERVL -2 462 1 2415 190 140 18 chr10 90998768 90999389 -54589899 + MER44D DNA MER2_type 32 600 -5 3739 145 19 12 chr10 90999472 91000120 -54589168 - MER39B LTR ERV1 0 653 2 254 395 37 16 chr10 91000189 91000379 -54588909 - MIR SINE MIR -48 214 21 1896 253 64 39 chr10 91001080 91001749 -54587539 - MER76 LTR ERV 0 688 3 23 86 0 0 chr10 91001943 91002001 -54587287 + AT_rich Low_complexity Low_complexity 1 58 0 198 215 0 76 chr10 91002224 91002303 -54586985 + L2 LINE L2 3134 3206 -107 302 225 13 172 chr10 91002405 91002556 -54586732 + L2 LINE L2 3187 3313 0 1423 226 54 43 chr10 91002860 91003320 -54585968 + MER31B LTR ERV1 2 466 0 620 304 60 73 chr10 91003835 91004766 -54584522 - L1M4 LINE L1 -1794 4352 3434 2314 240 37 75 chr10 91006206 91006678 -54582610 + MER21B LTR ERV1 1 434 -429 1603 148 62 54 chr10 91006678 91007050 -54582238 + THE1C LTR MaLR 1 375 0 2314 240 37 75 chr10 91007050 91007356 -54581932 + MER21B LTR ERV1 434 750 -113 353 286 30 38 chr10 91007998 91008131 -54581157 + MIR SINE MIR 87 218 -44 398 233 67 67 chr10 91008964 91009114 -54580174 + MER58C DNA MER1_type 66 215 0 24 32 0 0 chr10 91009595 91009626 -54579662 + AT_rich Low_complexity Low_complexity 1 31 0 12195 23 3 1 chr10 91009626 91011826 -54577462 - L1PA3 LINE L1 0 6155 3950 27 87 0 0 chr10 91011924 91011993 -54577295 + AT_rich Low_complexity Low_complexity 1 69 0 2469 79 0 0 chr10 91012052 91012357 -54576931 - AluY SINE Alu -6 305 1 280 322 0 0 chr10 91013215 91013302 -54575986 - L2 LINE L2 -1636 1678 1592 351 394 13 13 chr10 91013484 91013710 -54575578 - L2 LINE L2 -2370 944 719 714 303 81 47 chr10 91013720 91014103 -54575185 + L2 LINE L2 2397 2792 -522 235 187 13 53 chr10 91014130 91014205 -54575083 - MLT1E LTR MaLR -16 577 506 763 333 84 29 chr10 91014374 91014753 -54574535 - LTR16B LTR ERVL -21 443 44 5292 93 9 0 chr10 91014898 91015651 -54573637 - L1PA8 LINE L1 -1740 4406 3647 6490 72 12 29 chr10 91015651 91015964 -54573324 + L1PA8 LINE L1 4416 4733 -1439 207 0 0 0 chr10 91015964 91015987 -54573301 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6490 72 12 29 chr10 91015987 91017463 -54571825 + L1PA8 LINE L1 4733 6161 -11 730 314 85 8 chr10 91017501 91017749 -54571539 + L2 LINE L2 2804 3070 -243 1413 234 48 12 chr10 91018205 91018542 -54570746 + MLT2C1 LTR ERVL 1 349 -48 200 143 24 0 chr10 91018561 91018603 -54570685 + (TA)n Simple_repeat Simple_repeat 1 43 0 271 278 133 50 chr10 91018887 91019067 -54570221 + MIR SINE MIR 49 243 -19 248 234 0 31 chr10 91070003 91070067 -54519221 + L1MC5 LINE L1 7852 7913 -48 23 0 0 0 chr10 91070067 91070090 -54519198 + AT_rich Low_complexity Low_complexity 1 23 0 489 350 32 0 chr10 91070090 91070276 -54519012 + MIR SINE MIR 34 225 -37 338 302 58 53 chr10 91070543 91070768 -54518520 - L1MEd LINE L1 -5880 239 14 226 193 18 0 chr10 91071175 91071232 -54518056 - L1MCa LINE L1 -4362 2064 2007 254 319 62 26 chr10 91071347 91071460 -54517828 - L2 LINE L2 -1362 1952 1836 236 264 15 117 chr10 91071504 91071701 -54517587 + L2 LINE L2 2260 2436 -878 466 180 0 98 chr10 91072683 91072805 -54516483 + FLAM_C SINE Alu 1 110 -33 291 140 0 0 chr10 91072811 91072861 -54516427 + (GA)n Simple_repeat Simple_repeat 1 50 0 180 111 0 0 chr10 91073470 91073497 -54515791 + (TATATG)n Simple_repeat Simple_repeat 4 30 0 282 36 0 91 chr10 91073573 91073628 -54515660 + L1MA9 LINE L1 6262 6311 -1 3581 133 8 48 chr10 91073637 91074281 -54515007 - L1PA15 LINE L1 -3 6162 5545 3263 201 21 0 chr10 91074281 91074958 -54514330 - L1PA15 LINE L1 -987 5159 4469 24 32 0 0 chr10 91075459 91075490 -54513798 + AT_rich Low_complexity Low_complexity 1 31 0 186 43 0 0 chr10 91075564 91075587 -54513701 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 1742 168 18 34 chr10 91075701 91076082 -54513206 - THE1C LTR MaLR 0 375 1 181 198 69 0 chr10 91076084 91076200 -54513088 + (TA)n Simple_repeat Simple_repeat 1 124 0 475 279 29 64 chr10 91076251 91076320 -54512968 + MIR SINE MIR 8 78 -184 3189 91 39 0 chr10 91076320 91076804 -54512484 - L1MA2 LINE L1 0 6304 5802 475 279 29 64 chr10 91076804 91076993 -54512295 + MIR SINE MIR 78 254 -8 616 317 70 8 chr10 91077032 91077275 -54512013 + MIR SINE MIR 5 262 0 262 336 64 9 chr10 91077381 91077491 -54511797 + MIR3 SINE MIR 41 156 -52 1592 220 66 54 chr10 91077888 91078387 -54510901 - MLT1D LTR MaLR 0 505 1 814 205 39 154 chr10 91078395 91078651 -54510637 + L1MC/D LINE L1 5099 5246 -1113 2093 135 0 0 chr10 91078651 91078948 -54510340 + AluSx SINE Alu 1 297 -15 814 205 39 154 chr10 91078948 91079324 -54509964 + L1MC/D LINE L1 5246 5664 -695 * 1317 256 50 42 chr10 91079322 91079803 -54509485 + L1MB7 LINE L1 733 1217 -5325 929 236 10 0 chr10 91079805 91080000 -54509288 + AluJo SINE Alu 72 268 -44 1328 260 50 54 chr10 91080058 91080612 -54508676 + L1MB7 LINE L1 1458 2009 -4637 6263 222 49 18 chr10 91080631 91083345 -54505943 + L1MB7 LINE L1 3867 6660 -22 28 0 0 0 chr10 91084326 91084354 -54504934 + AT_rich Low_complexity Low_complexity 1 28 0 315 213 0 0 chr10 91084865 91084940 -54504348 + (TATATG)n Simple_repeat Simple_repeat 1 75 0 22 35 0 0 chr10 91086070 91086099 -54503189 + AT_rich Low_complexity Low_complexity 1 29 0 479 290 132 17 chr10 91086112 91086522 -54502766 + L1MC/D LINE L1 4061 4517 -1629 1406 214 39 0 chr10 91086534 91086866 -54502422 - L1MA7 LINE L1 -5 6286 5942 573 146 0 27 chr10 91086863 91086973 -54502315 + L1MA7 LINE L1 5863 5969 -343 * 12657 229 49 14 chr10 91087098 91091826 -54497462 - L1M1 LINE L1 -848 5122 87 653 257 78 27 chr10 91091883 91092179 -54497109 + L1MC/D LINE L1 4507 4817 -1329 237 301 86 11 chr10 91092400 91092586 -54496702 + L1ME3A LINE L1 5137 5336 -810 * 300 280 84 4 chr10 91092583 91092738 -54496550 + L1ME3A LINE L1 5985 6158 -8 198 216 21 62 chr10 91092784 91092881 -54496407 - MER5C DNA MER1_type -121 203 111 254 206 14 0 chr10 91093004 91093077 -54496211 + (TA)n Simple_repeat Simple_repeat 2 75 0 23 0 0 0 chr10 91093175 91093198 -54496090 + AT_rich Low_complexity Low_complexity 1 23 0 253 264 101 17 chr10 91093608 91093786 -54495502 + L1MC/D LINE L1 4798 4990 -1156 282 366 31 0 chr10 91094386 91094577 -54494711 + L1MC/D LINE L1 5657 5853 -1955 360 275 58 8 chr10 91095961 91096081 -54493207 + MIR SINE MIR 63 188 -74 269 273 110 15 chr10 91096303 91096436 -54492852 - MER20 DNA MER1_type 0 219 71 2056 125 3 0 chr10 91096477 91096766 -54492522 + AluSx SINE Alu 11 300 -12 2659 157 118 84 chr10 91096861 91097397 -54491891 - LTR8A LTR ERV1 0 727 160 1974 149 0 3 chr10 91097397 91097698 -54491590 + AluSx SINE Alu 1 300 -12 2659 157 118 84 chr10 91097698 91097864 -54491424 - LTR8A LTR ERV1 -567 160 1 3392 133 55 4 chr10 91099477 91100040 -54489248 - LTR29 LTR ERV1 -13 609 18 1456 279 147 31 chr10 91100417 91101058 -54488230 + MER50 LTR ERV1 1 715 -19 411 208 0 20 chr10 91101031 91101132 -54488156 - MER34C LTR ERV1 -31 554 456 * 2011 120 83 8 chr10 91101132 91101507 -54487781 - LTR7 LTR ERV1 0 450 1 1211 213 196 11 chr10 91101597 91101959 -54487329 - MER34C LTR ERV1 -156 429 1 2138 137 42 101 chr10 91102045 91102706 -54486582 - MER4A LTR ERV1 0 465 1 23 0 0 0 chr10 91103512 91103535 -54485753 + AT_rich Low_complexity Low_complexity 1 23 0 1923 203 49 88 chr10 91103590 91104260 -54485028 + LTR48B LTR ERV1 1 644 0 2849 147 16 56 chr10 91104312 91104552 -54484736 - MER41E LTR ERV1 0 512 303 4682 103 11 0 chr10 91104552 91105205 -54484083 + PABL_A LTR ERV1 1 660 0 2849 147 16 56 chr10 91105205 91105480 -54483808 - MER41E LTR ERV1 -209 303 18 2139 167 37 36 chr10 91105552 91106573 -54482715 + PABL_A-int LTR ERV1 65 1591 -3289 2510 192 14 32 chr10 91106682 91107188 -54482100 + LTR31 LTR ERV1 108 604 -15 413 215 0 11 chr10 91107198 91107291 -54481997 + LTR48B-int LTR ERV1 898 989 -5342 182 152 0 43 chr10 91107292 91107338 -54481950 + (CATATA)n Simple_repeat Simple_repeat 2 45 0 611 271 41 18 chr10 91107371 91107541 -54481747 + LTR48B-int LTR ERV1 1116 1289 -5042 204 40 0 0 chr10 91108172 91108197 -54481091 + (CCA)n Simple_repeat Simple_repeat 3 27 0 2928 71 0 5 chr10 91108267 91108646 -54480642 + MLT2A1 LTR ERVL 1 377 -67 183 156 0 0 chr10 91108762 91108794 -54480494 + (TATATG)n Simple_repeat Simple_repeat 4 35 0 379 248 24 107 chr10 91108797 91109003 -54480285 + LTR48B-int LTR ERV1 1681 1869 -4462 541 281 15 36 chr10 91109111 91109307 -54479981 + LTR48B-int LTR ERV1 1909 2100 -4231 750 198 33 55 chr10 91109319 91109757 -54479531 + LTR48B-int LTR ERV1 1154 3129 -3202 7766 218 70 63 chr10 91109766 91111280 -54478008 + LTR48B-int LTR ERV1 1680 3183 -3148 14904 35 7 2 chr10 91111280 91113859 -54475429 + L1PA4 LINE L1 3566 6155 0 7766 218 70 63 chr10 91113859 91115358 -54473930 + LTR48B-int LTR ERV1 3183 6175 -156 1466 239 100 46 chr10 91115456 91116064 -54473224 + LTR48B LTR ERV1 1 641 -3 1168 275 156 32 chr10 91116267 91116295 -54472993 + LTR8 LTR ERV1 1 24 -667 3726 142 10 23 chr10 91116295 91116915 -54472373 - LTR9 LTR ERV1 0 612 1 1168 275 156 32 chr10 91116915 91117501 -54471787 + LTR8 LTR ERV1 24 691 0 22 0 0 0 chr10 91117560 91117582 -54471706 + AT_rich Low_complexity Low_complexity 1 22 0 2235 119 0 3 chr10 91118113 91118425 -54470863 - AluSx SINE Alu -1 311 1 3557 175 84 24 chr10 91118889 91120155 -54469133 + L1ME1 LINE L1 4759 6095 -71 649 276 25 35 chr10 91120159 91120331 -54468957 + L1MB8 LINE L1 1551 1720 -4664 210 37 0 0 chr10 91120331 91120358 -54468930 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 649 276 25 35 chr10 91120358 91120468 -54468820 + L1MB8 LINE L1 1720 1830 -4554 400 288 91 101 chr10 91120611 91121174 -54468114 + L1MB8 LINE L1 1898 2454 -4109 1014 246 114 2 chr10 91121180 91121643 -54467645 + L1MB8 LINE L1 2727 3241 -3141 325 259 31 77 chr10 91121673 91121932 -54467356 + L1MB8 LINE L1 3457 3703 -2679 937 219 18 44 chr10 91121935 91122163 -54467125 + AluJo SINE Alu 11 232 -80 189 0 0 0 chr10 91122163 91122184 -54467104 + (A)n Simple_repeat Simple_repeat 1 21 0 1765 262 40 33 chr10 91122184 91122887 -54466401 + L1MB8 LINE L1 3673 4380 -2002 1225 242 12 27 chr10 91122931 91123266 -54466022 + L1MB8 LINE L1 6066 6395 -19 30 0 0 0 chr10 91123275 91123305 -54465983 + AT_rich Low_complexity Low_complexity 1 30 0 993 105 8 0 chr10 91123313 91123446 -54465842 + AluSq/x SINE Alu 1 134 -179 2119 113 0 0 chr10 91123446 91123757 -54465531 + AluSx SINE Alu 1 311 0 222 91 0 0 chr10 91124416 91124449 -54464839 + (TCTA)n Simple_repeat Simple_repeat 1 33 0 194 174 22 0 chr10 91124635 91124681 -54464607 + (TA)n Simple_repeat Simple_repeat 2 48 0 532 164 45 18 chr10 91124733 91124843 -54464445 - L1MB1 LINE L1 -23 6145 6033 1313 190 13 43 chr10 91125352 91125652 -54463636 - AluJo SINE Alu -19 293 3 210 71 0 0 chr10 91125943 91125971 -54463317 + (A)n Simple_repeat Simple_repeat 1 28 0 267 236 0 0 chr10 91126136 91126208 -54463080 + (CATATA)n Simple_repeat Simple_repeat 5 76 0 2495 68 0 0 chr10 91126677 91126984 -54462304 + AluY SINE Alu 1 307 -4 1874 155 7 10 chr10 91127109 91127412 -54461876 + AluSx SINE Alu 1 302 -10 315 0 0 0 chr10 91127413 91127448 -54461840 + (CA)n Simple_repeat Simple_repeat 2 36 0 345 354 10 14 chr10 91127649 91127858 -54461430 + L1ME LINE L1 75 282 -5788 783 187 15 0 chr10 91128492 91128626 -54460662 - AluJo SINE Alu -176 136 1 4088 135 64 29 chr10 91130313 91131061 -54458227 + LTR1 LTR ERV1 12 785 0 933 303 46 26 chr10 91131122 91131472 -54457816 + MLT1I LTR MaLR 47 403 -6 1444 179 26 77 chr10 91131623 91131763 -54457525 + AluJo SINE Alu 1 147 -165 1944 134 3 34 chr10 91131763 91132083 -54457205 + AluSx SINE Alu 1 310 -2 1444 179 26 77 chr10 91132083 91132255 -54457033 + AluJo SINE Alu 147 297 -15 6337 76 17 1 chr10 91134222 91135035 -54454253 + LTR12 LTR ERV1 1 826 0 9131 102 13 11 chr10 91135059 91136367 -54452921 + HERV9 LTR ERV1 58 1367 -7032 580 62 0 12 chr10 91136368 91136449 -54452839 + HERV9 LTR ERV1 1661 1740 -5156 * 3331 100 0 2 chr10 91136447 91136906 -54452382 + HERV9 LTR ERV1 7626 8083 -316 243 0 0 0 chr10 91136950 91136977 -54452311 + (CA)n Simple_repeat Simple_repeat 2 28 0 367 219 36 0 chr10 91136981 91137118 -54452170 + (TA)n Simple_repeat Simple_repeat 1 142 0 1050 252 50 73 chr10 91137148 91137712 -54451576 + L1MC3 LINE L1 508 1058 -4849 8788 159 11 22 chr10 91137825 91140759 -54448529 + L1MA1 LINE L1 1685 6575 -7 21 36 0 0 chr10 91140759 91140787 -54448501 + AT_rich Low_complexity Low_complexity 1 28 0 7556 230 70 61 chr10 91140791 91145986 -54443302 + L1MC3 LINE L1 1813 7063 -1002 2282 66 0 0 chr10 91145986 91146260 -54443028 + AluSc SINE Alu 35 308 -1 7556 230 70 61 chr10 91146260 91147100 -54442188 + L1MC3 LINE L1 7063 7895 -170 405 301 18 25 chr10 91148243 91148406 -54440882 + MIR SINE MIR 87 248 -14 4898 178 24 36 chr10 91149528 91149849 -54439439 - L1MC1 LINE L1 0 6333 6010 1966 110 14 7 chr10 91149849 91150151 -54439137 + AluSp SINE Alu 1 304 0 4898 178 24 36 chr10 91150151 91150285 -54439003 - L1MC1 LINE L1 -323 6010 5876 12321 146 51 49 chr10 91150285 91152696 -54436592 + Tigger1 DNA MER2_type 3 2418 0 4898 178 24 36 chr10 91152696 91153468 -54435820 - L1MC1 LINE L1 -457 5876 5152 4141 193 17 46 chr10 91153464 91154140 -54435148 - L1MB2 LINE L1 0 6407 5788 * 294 29 0 0 chr10 91154140 91154175 -54435113 + (TG)n Simple_repeat Simple_repeat 2 36 0 4141 193 17 46 chr10 91154175 91154861 -54434427 - L1MB2 LINE L1 -619 5788 5084 932 293 45 44 chr10 91154866 91155292 -54433996 - MSTA LTR MaLR -1 427 1 598 243 35 0 chr10 91155292 91155461 -54433827 - L1MB2 LINE L1 -1298 5084 4910 2442 264 62 32 chr10 91155464 91156612 -54432676 - L1MB2 LINE L1 -4521 1792 805 292 286 12 2 chr10 91156961 91157062 -54432226 - L1MB2 LINE L1 -5813 490 33 1739 191 0 13 chr10 91157065 91157379 -54431909 - AluJo SINE Alu 0 312 3 980 237 10 91 chr10 91157382 91157730 -54431558 - L1M4 LINE L1 -978 5168 4856 2199 112 0 7 chr10 91157730 91158068 -54431220 - AluSx SINE Alu 0 336 1 980 237 10 91 chr10 91158068 91158134 -54431154 - L1M4 LINE L1 -1290 4856 4786 1384 222 48 17 chr10 91159384 91159740 -54429548 - MER39 LTR ERV1 -17 690 324 538 59 47 0 chr10 91160935 91161020 -54428268 + CT-rich Low_complexity Low_complexity 2 90 0 1458 181 62 28 chr10 91161020 91161308 -54427980 - AluJb SINE Alu -14 298 1 279 114 0 0 chr10 91161465 91161509 -54427779 + (CA)n Simple_repeat Simple_repeat 2 45 0 1524 192 42 0 chr10 91162886 91162903 -54426385 - AluJb SINE Alu -13 299 284 405 0 0 0 chr10 91162903 91162948 -54426340 + (GTTTG)n Simple_repeat Simple_repeat 1 45 0 1524 192 42 0 chr10 91162948 91163217 -54426071 - AluJb SINE Alu -28 284 1 1886 191 27 50 chr10 91163395 91163835 -54425453 + MLT1C LTR MaLR 38 467 0 2618 147 40 17 chr10 91164140 91164611 -54424677 - MER31A LTR ERV1 -3 482 1 331 211 256 0 chr10 91164683 91164773 -54424515 - AluJ SINE Alu -8 294 182 1277 149 0 10 chr10 91164813 91165007 -54424281 - AluJ SINE Alu -120 192 1 1165 234 26 92 chr10 91165903 91166449 -54422839 - MER67D LTR ERV1 -4 510 1 280 337 110 0 chr10 91166453 91166616 -54422672 - MIR SINE MIR -15 247 67 1821 152 14 28 chr10 91166624 91166913 -54422375 - AluJo SINE Alu -23 289 5 1717 209 79 8 chr10 91167650 91168018 -54421270 - MER39 LTR ERV1 -140 567 174 24 0 0 0 chr10 91168215 91168239 -54421049 + AT_rich Low_complexity Low_complexity 1 24 0 4431 171 14 48 chr10 91168358 91169285 -54420003 + MER4D LTR ERV1 1 896 -7 22 0 0 0 chr10 91169288 91169310 -54419978 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr10 91169402 91169426 -54419862 + AT_rich Low_complexity Low_complexity 1 24 0 639 339 69 18 chr10 91169714 91170106 -54419182 - MLT1J2 LTR MaLR -23 427 16 2418 54 17 0 chr10 91170438 91170736 -54418552 + AluY SINE Alu 1 303 -8 424 338 69 43 chr10 91171095 91171486 -54417802 + L1MEc LINE L1 1080 1480 -5154 357 297 0 20 chr10 91171495 91171596 -54417692 + MER58 DNA MER1_type 1 99 -242 432 260 10 0 chr10 91171608 91171708 -54417580 + MER58 DNA MER1_type 2318 2418 -2 499 311 59 59 chr10 91171815 91172208 -54417080 + L1ME LINE L1 1443 1929 -4715 1388 197 34 96 chr10 91172208 91172624 -54416664 + MLT1B LTR MaLR 1 390 0 499 311 59 59 chr10 91172624 91172727 -54416561 + L1ME LINE L1 1929 2031 -4613 21 0 0 0 chr10 91173257 91173278 -54416010 + AT_rich Low_complexity Low_complexity 1 21 0 329 325 15 25 chr10 91173280 91173483 -54415805 + L1ME LINE L1 3610 3810 -2834 2060 179 53 27 chr10 91173483 91173896 -54415392 + MSTB1 LTR MaLR 9 432 0 1672 233 79 71 chr10 91173945 91175000 -54414288 + L1ME LINE L1 4734 5796 -848 781 291 37 9 chr10 91175658 91175941 -54413347 + L1ME LINE L1 5837 6138 -524 271 294 0 9 chr10 91176056 91176165 -54413123 + L1MEc LINE L1 1675 1782 -5043 2232 271 79 33 chr10 91176379 91178696 -54410592 + L1MEc LINE L1 655 3041 -3174 1149 234 62 39 chr10 91178708 91179140 -54410148 + L1M4 LINE L1 4755 5196 -950 2555 226 64 132 chr10 91180810 91181042 -54408246 + L1MD1 LINE L1 1 247 -6293 282 29 0 0 chr10 91181042 91181077 -54408211 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2555 226 64 132 chr10 91181077 91181098 -54408190 + L1MD1 LINE L1 247 268 -6272 1567 209 0 3 chr10 91181098 91181380 -54407908 - AluJb SINE Alu -31 281 1 2555 226 64 132 chr10 91181380 91182313 -54406975 + L1MD1 LINE L1 268 1107 -5433 1644 271 27 21 chr10 91182426 91183126 -54406162 + L1MD1 LINE L1 2879 3582 -2958 3557 223 79 12 chr10 91183155 91184344 -54404944 + L1MD1 LINE L1 5236 6344 -292 14620 141 29 55 chr10 91184344 91185114 -54404174 + Tigger4(Zombi) DNA MER2_type 1 789 -1942 2168 117 0 10 chr10 91185114 91185421 -54403867 + AluSx SINE Alu 1 304 -8 14620 141 29 55 chr10 91185421 91186801 -54402487 + Tigger4(Zombi) DNA MER2_type 789 2203 -528 2197 115 7 7 chr10 91186801 91187096 -54402192 + AluSx SINE Alu 1 295 -17 14620 141 29 55 chr10 91187096 91187707 -54401581 + Tigger4(Zombi) DNA MER2_type 2203 2693 -38 2073 127 34 0 chr10 91187707 91187998 -54401290 - AluSx SINE Alu -11 301 1 14620 141 29 55 chr10 91187998 91188037 -54401251 + Tigger4(Zombi) DNA MER2_type 2693 2731 0 3557 223 79 12 chr10 91188037 91188157 -54401131 + L1MD1 LINE L1 6344 6630 -6 225 393 56 9 chr10 91188576 91188683 -54400605 + L2 LINE L2 3150 3261 -11 180 324 129 43 chr10 91188680 91188819 -54400469 - L2 LINE L2 -1414 1900 1750 * 244 253 35 35 chr10 91190595 91190682 -54398606 + L2 LINE L2 3215 3301 -12 3908 158 24 14 chr10 91190777 91191481 -54397807 + MER50 LTR ERV1 1 711 -23 882 144 0 0 chr10 91192080 91192212 -54397076 + FLAM_C SINE Alu 2 133 0 4376 94 72 45 chr10 91192483 91193196 -54396092 + SVA Other Other 655 1386 0 1929 113 0 4 chr10 91194014 91194280 -54395008 - AluSq SINE Alu -16 297 33 2134 203 16 19 chr10 91195547 91195980 -54393308 - MSTB1 LTR MaLR 0 432 1 263 239 15 15 chr10 91197287 91197354 -54391934 + MER3 DNA MER1_type 1 67 -142 333 269 0 0 chr10 91197668 91197746 -54391542 + L2 LINE L2 3186 3263 -9 192 40 0 0 chr10 91197867 91197892 -54391396 + (CA)n Simple_repeat Simple_repeat 2 26 0 558 204 9 0 chr10 91197925 91198038 -54391250 - Tigger1 DNA MER2_type -4 2414 2301 8093 193 54 90 chr10 91198041 91200306 -54388982 + L1M2 LINE L1 5 2189 -4660 2111 165 3 5 chr10 91200302 91200672 -54388616 + L1MA4A LINE L1 5903 6271 -32 * 23 54 0 0 chr10 91200681 91200718 -54388570 + AT_rich Low_complexity Low_complexity 1 37 0 13068 145 34 11 chr10 91200718 91202958 -54386330 - Tigger1 DNA MER2_type -101 2317 26 381 225 82 86 chr10 91203053 91203320 -54385968 + L1ME3A LINE L1 4457 4722 -1424 761 156 23 8 chr10 91203340 91203468 -54385820 + FLAM_C SINE Alu 1 130 -13 742 277 132 16 chr10 91203506 91204362 -54384926 + L1ME3A LINE L1 4760 5707 -463 283 231 69 0 chr10 91204365 91204525 -54384763 + (TA)n Simple_repeat Simple_repeat 2 172 0 258 156 0 0 chr10 91204537 91204582 -54384706 + (TA)n Simple_repeat Simple_repeat 2 46 0 1352 196 25 32 chr10 91204588 91204868 -54384420 - AluJo SINE Alu -34 278 1 1349 254 78 5 chr10 91204868 91205290 -54383998 + L1ME3A LINE L1 5700 6152 -18 369 312 91 57 chr10 91206205 91206608 -54382680 + L1M2 LINE L1 2901 3326 -3522 509 278 22 70 chr10 91206608 91206881 -54382407 - MIR SINE MIR 0 262 3 369 312 91 57 chr10 91206881 91206983 -54382305 + L1M2 LINE L1 3326 3423 -3425 26 30 0 0 chr10 91207193 91207226 -54382062 + AT_rich Low_complexity Low_complexity 1 33 0 34 0 0 0 chr10 91207296 91207330 -54381958 + AT_rich Low_complexity Low_complexity 1 34 0 403 246 135 62 chr10 91207357 91207567 -54381721 + L1ME4a LINE L1 5833 6065 -56 2086 121 6 16 chr10 91207567 91207880 -54381408 - AluSx SINE Alu -2 310 1 403 246 135 62 chr10 91207880 91207913 -54381375 + L1ME4a LINE L1 6065 6094 -27 229 251 113 74 chr10 91208063 91208294 -54380994 + L1ME2 LINE L1 5833 6072 -92 1032 296 141 5 chr10 91208320 91208725 -54380563 + MLT1H LTR MaLR 89 548 -1 293 343 71 0 chr10 91208934 91209074 -54380214 + MER117 DNA MER1_type 6 155 -42 256 319 44 18 chr10 91209101 91209214 -54380074 - MIR3 SINE MIR -53 155 40 350 287 142 12 chr10 91210387 91210571 -54378717 + MIR SINE MIR 5 208 -54 236 286 82 61 chr10 91211576 91211674 -54377614 + MIR3 SINE MIR 101 200 -8 223 322 35 23 chr10 91212339 91212426 -54376862 + L2 LINE L2 2717 2804 -510 * 240 280 40 0 chr10 91212425 91212500 -54376788 + MIR SINE MIR 121 198 -64 292 287 119 30 chr10 91212870 91213072 -54376216 - MIR SINE MIR 0 262 43 2193 160 20 16 chr10 91216107 91216528 -54372760 - MER89 LTR ERV1 0 559 38 195 113 57 0 chr10 91217024 91217077 -54372211 + (TA)n Simple_repeat Simple_repeat 2 57 0 3173 83 4 28 chr10 91217091 91217551 -54371737 - L1PB2 LINE L1 -6 6145 5697 945 182 91 5 chr10 91217685 91217894 -54371394 - MER61E LTR ERV1 -4 565 339 250 222 0 97 chr10 91217996 91218068 -54371220 - MER61E LTR ERV1 -406 163 99 * 421 191 79 0 chr10 91218065 91218154 -54371134 - LTR25 LTR ERV1 -431 363 268 224 337 81 0 chr10 91219235 91219321 -54369967 + MIR SINE MIR 42 134 -74 2451 63 3 0 chr10 91219347 91219646 -54369642 - AluY SINE Alu -11 300 1 22 56 0 0 chr10 91220413 91220449 -54368839 + AT_rich Low_complexity Low_complexity 1 36 0 3724 206 31 80 chr10 91220493 91221940 -54367348 - L1MB7 LINE L1 0 6184 4667 28 0 0 0 chr10 91221940 91221968 -54367320 + AT_rich Low_complexity Low_complexity 1 28 0 3724 206 31 80 chr10 91221968 91221986 -54367302 - L1MB7 LINE L1 -1517 4667 4650 2045 119 4 0 chr10 91221986 91222263 -54367025 - AluSp SINE Alu -2 311 34 3724 206 31 80 chr10 91222263 91222777 -54366511 - L1MB7 LINE L1 -1534 4650 4282 2095 118 17 0 chr10 91222784 91223072 -54366216 - AluSp SINE Alu 0 313 21 2023 115 7 0 chr10 91223273 91223551 -54365737 + AluSp SINE Alu 34 313 0 226 263 129 21 chr10 91223620 91223814 -54365474 - L1MEc LINE L1 -4314 2249 2035 1981 273 45 31 chr10 91224052 91224798 -54364490 - L1MEc LINE L1 -4610 1774 1010 1975 161 135 5 chr10 91224798 91225177 -54364111 - MSTA LTR MaLR 0 428 1 1981 273 45 31 chr10 91225177 91225376 -54363912 - L1MEc LINE L1 -5374 1010 815 210 91 0 0 chr10 91225380 91225413 -54363875 + (TTTA)n Simple_repeat Simple_repeat 1 33 0 883 217 56 106 chr10 91225438 91225899 -54363389 + LTR8A LTR ERV1 290 727 0 384 318 147 60 chr10 91225901 91226278 -54363010 + L2 LINE L2 2197 2623 -691 2114 155 12 54 chr10 91226278 91226685 -54362603 - MLT1B LTR MaLR 0 390 1 384 318 147 60 chr10 91226685 91226770 -54362518 + L2 LINE L2 2623 2699 -615 212 333 40 83 chr10 91226875 91227103 -54362185 + MIR SINE MIR 2 219 -43 1890 200 146 26 chr10 91227250 91228084 -54361204 - L1MC4 LINE L1 -743 5403 5017 253 290 0 0 chr10 91228100 91228162 -54361126 + L2 LINE L2 3015 3076 -196 22 0 0 0 chr10 91228973 91228995 -54360293 + AT_rich Low_complexity Low_complexity 1 22 0 2204 117 0 0 chr10 91228995 91229285 -54360003 - AluSx SINE Alu -22 290 1 230 279 16 0 chr10 91230086 91230147 -54359141 - MER5A DNA MER1_type 0 189 128 628 241 112 0 chr10 91230216 91230386 -54358902 - MER5A DNA MER1_type 0 189 1 402 313 145 11 chr10 91231675 91231854 -54357434 - MIR SINE MIR -23 239 37 236 381 8 24 chr10 91232101 91232227 -54357061 + L2 LINE L2 3053 3176 -96 557 206 0 0 chr10 91236129 91236255 -54353033 - L1P LINE L1 -2684 3462 3337 571 181 26 9 chr10 91237474 91237590 -54351698 + FAM SINE Alu 55 172 -13 445 273 100 7 chr10 91238236 91238455 -54350833 + L1ME LINE L1 524 759 -5311 317 177 0 48 chr10 91238621 91238683 -54350605 + MLT1J2 LTR MaLR 57 115 -335 863 137 14 0 chr10 91238714 91238853 -54350435 + L1PB4 LINE L1 6015 6155 -1 22 56 0 0 chr10 91239125 91239161 -54350127 + AT_rich Low_complexity Low_complexity 1 36 0 415 278 74 65 chr10 91239243 91239567 -54349721 + L1M4 LINE L1 3034 3360 -2786 23 78 0 0 chr10 91239582 91239633 -54349655 + AT_rich Low_complexity Low_complexity 1 51 0 384 333 37 32 chr10 91239770 91239959 -54349329 + L1MC4a LINE L1 5688 5877 -1931 423 318 112 18 chr10 91240616 91240839 -54348449 - MIR SINE MIR -12 250 7 326 311 82 30 chr10 91241079 91241349 -54347939 - L2 LINE L2 -892 2422 2139 302 302 170 33 chr10 91241396 91241578 -54347710 + L3 LINE CR1 1298 1504 -73 324 0 0 0 chr10 91242531 91242567 -54346721 + (TG)n Simple_repeat Simple_repeat 1 36 0 198 351 39 0 chr10 91242975 91243052 -54346236 + MIR SINE MIR 110 189 -73 1974 137 7 7 chr10 91243063 91243356 -54345932 + AluSx SINE Alu 1 293 -19 1101 334 44 10 chr10 91243592 91244002 -54345286 - LTR16A LTR ERVL -2 448 25 21 57 0 0 chr10 91244132 91244167 -54345121 + AT_rich Low_complexity Low_complexity 1 35 0 338 317 90 14 chr10 91244257 91244402 -54344886 + MIR SINE MIR 50 205 -57 248 137 20 0 chr10 91244518 91244569 -54344719 + (TAGA)n Simple_repeat Simple_repeat 2 53 0 392 52 35 0 chr10 91244570 91244628 -54344660 + (GAAA)n Simple_repeat Simple_repeat 3 62 0 294 95 0 0 chr10 91244649 91244691 -54344597 + (CA)n Simple_repeat Simple_repeat 1 42 0 415 195 41 0 chr10 91245310 91245433 -54343855 - L1M4 LINE L1 -1271 4875 4748 1659 178 38 25 chr10 91245470 91246837 -54342451 + L1MC2 LINE L1 4886 6341 -3 835 234 25 30 chr10 91247378 91247575 -54341713 - MIR SINE MIR -39 223 28 1967 186 56 55 chr10 91248700 91249095 -54340193 + L1MB7 LINE L1 5587 5985 -199 249 33 0 0 chr10 91249095 91249125 -54340163 + (TG)n Simple_repeat Simple_repeat 2 31 0 1967 186 56 55 chr10 91249125 91249315 -54339973 + L1MB7 LINE L1 5985 6173 -11 216 0 0 0 chr10 91249341 91249365 -54339923 + (GA)n Simple_repeat Simple_repeat 2 25 0 2184 85 0 4 chr10 91249389 91249670 -54339618 - AluY SINE Alu -20 291 12 350 269 102 0 chr10 91251163 91251271 -54338017 - L2 LINE L2 0 3313 3195 280 326 35 38 chr10 91252179 91252366 -54336922 - MIR SINE MIR -45 217 33 2246 113 21 0 chr10 91252441 91252769 -54336519 - L1PA14 LINE L1 -2 6159 5825 191 277 59 67 chr10 91253141 91253260 -54336028 - MIR SINE MIR -58 204 87 288 0 0 0 chr10 91253384 91253416 -54335872 + (TG)n Simple_repeat Simple_repeat 2 33 0 181 139 47 0 chr10 91253798 91253841 -54335447 + (TATATG)n Simple_repeat Simple_repeat 6 50 0 1715 153 28 18 chr10 91253871 91254198 -54335090 - Tigger2a DNA MER2_type -104 330 1 2550 287 76 31 chr10 91254207 91255637 -54333651 - L2 LINE L2 -32 3281 1783 732 310 11 27 chr10 91255646 91255907 -54333381 + MIR SINE MIR 6 262 0 739 338 129 32 chr10 91256818 91257679 -54331609 - L2 LINE L2 -884 2430 1487 456 19 0 0 chr10 91257691 91257744 -54331544 + (GA)n Simple_repeat Simple_repeat 2 54 0 269 209 11 33 chr10 91258171 91258262 -54331026 + L1ME3A LINE L1 6077 6165 -5 315 297 58 32 chr10 91258459 91258802 -54330486 - L1M4 LINE L1 -2800 3346 2995 462 234 7 32 chr10 91258806 91258960 -54330328 - L1ME2 LINE L1 -9 6155 6006 1936 240 72 61 chr10 91259062 91259953 -54329335 - L1ME2 LINE L1 -9 6155 5255 701 250 55 88 chr10 91260617 91260811 -54328477 - L1ME2 LINE L1 -2732 3414 3215 324 83 0 0 chr10 91260811 91260859 -54328429 + (TG)n Simple_repeat Simple_repeat 1 48 0 701 250 55 88 chr10 91260859 91261435 -54327853 - L1ME2 LINE L1 -2931 3215 2670 21 0 0 0 chr10 91261469 91261490 -54327798 + AT_rich Low_complexity Low_complexity 1 21 0 928 193 6 6 chr10 91261588 91261749 -54327539 - FRAM SINE Alu -10 166 6 1484 238 5 53 chr10 91261949 91262361 -54326927 - MLT2B1 LTR ERVL -128 392 1 577 341 55 5 chr10 91263471 91263691 -54325597 - MIR SINE MIR -12 250 20 740 154 5 123 chr10 91264178 91264373 -54324915 + MER44D DNA MER2_type 1 442 -167 234 260 7 41 chr10 91264433 91264579 -54324709 + A-rich Low_complexity Low_complexity 2 142 0 218 79 0 26 chr10 91264762 91264800 -54324488 + (TTTTA)n Simple_repeat Simple_repeat 2 38 0 4781 155 39 29 chr10 91264801 91265602 -54323686 - L1PA16 LINE L1 -2 6164 5341 2263 112 0 3 chr10 91265602 91265906 -54323382 - AluSx SINE Alu -9 303 1 4781 155 39 29 chr10 91265906 91266622 -54322666 - L1PA16 LINE L1 -825 5341 4633 4476 227 53 12 chr10 91266615 91267475 -54321813 - L1PA12 LINE L1 -3553 4031 3208 * 243 0 0 0 chr10 91267475 91267502 -54321786 + (TG)n Simple_repeat Simple_repeat 2 28 0 4476 227 53 12 chr10 91267502 91268415 -54320873 - L1PA12 LINE L1 -4376 3208 2182 1045 324 41 66 chr10 91268641 91268661 -54320627 - L1PA12 LINE L1 -5399 2182 2163 1749 151 94 23 chr10 91268661 91269011 -54320277 - THE1C LTR MaLR 0 375 1 1045 324 41 66 chr10 91269011 91270667 -54318621 - L1PA12 LINE L1 -5418 2163 9 897 179 28 0 chr10 91270670 91270849 -54318439 + MER44D DNA MER2_type 426 609 0 254 290 190 0 chr10 91270931 91271031 -54318257 - MIR SINE MIR -54 208 90 2313 152 31 21 chr10 91271266 91271688 -54317600 + MSTC LTR MaLR 1 426 -2 364 161 94 111 chr10 91272696 91272876 -54316412 - L1ME4a LINE L1 -50 6071 5895 * 419 349 6 6 chr10 91272865 91273063 -54316225 + (TATG)n Simple_repeat Simple_repeat 1 198 0 261 128 0 0 chr10 91273067 91273106 -54316182 - MSTC LTR MaLR -202 226 188 292 309 16 16 chr10 91273139 91273265 -54316023 + (TATG)n Simple_repeat Simple_repeat 3 128 0 1644 287 144 26 chr10 91273379 91274301 -54314987 - HAL1 LINE L1 -28 2479 1383 856 19 0 68 chr10 91274301 91274463 -54314825 + (TA)n Simple_repeat Simple_repeat 1 151 0 1644 287 144 26 chr10 91274463 91274730 -54314558 - HAL1 LINE L1 -1124 1383 1149 459 242 20 71 chr10 91274733 91274931 -54314357 - L1MEc LINE L1 -4781 2341 2154 728 263 26 5 chr10 91275025 91275219 -54314069 - MLT1F LTR MaLR 0 542 345 478 275 80 65 chr10 91275296 91275496 -54313792 - MLT1E LTR MaLR -339 203 1 759 325 42 15 chr10 91275609 91276009 -54313279 - L1MEc LINE L1 -5992 431 21 2038 130 0 3 chr10 91276269 91276569 -54312719 - AluSx SINE Alu -13 299 1 528 348 86 6 chr10 91276662 91277013 -54312275 - L1M4 LINE L1 -3381 2765 2387 728 220 11 16 chr10 91277147 91277338 -54311950 - L1M4c LINE L1 -1232 5725 5536 10145 153 14 6 chr10 91277341 91278952 -54310336 + Ricksha_c DNA DNA 8 1631 -415 309 77 0 0 chr10 91278952 91278991 -54310297 + Alu SINE Alu 1 39 -263 531 203 136 0 chr10 91279097 91279215 -54310073 - Ricksha DNA DNA -1047 134 1 476 250 8 0 chr10 91279215 91279339 -54309949 - L1M4c LINE L1 -1409 5548 5424 2663 264 62 33 chr10 91279357 91280559 -54308729 - L1M4c LINE L1 -1699 5258 4023 214 188 0 72 chr10 91280572 91280641 -54308647 + T-rich Low_complexity Low_complexity 4 67 0 1871 272 61 45 chr10 91280712 91282093 -54307195 - L1M4c LINE L1 -4309 2829 1285 245 29 29 0 chr10 91282093 91282127 -54307161 + (TTCTG)n Simple_repeat Simple_repeat 4 38 0 1871 272 61 45 chr10 91282127 91282196 -54307092 - L1M4c LINE L1 -5853 1285 1219 247 273 16 66 chr10 91282333 91282454 -54306834 - L1M4c LINE L1 -5918 937 823 30 0 0 0 chr10 91282726 91282756 -54306532 + AT_rich Low_complexity Low_complexity 1 30 0 236 335 42 12 chr10 91282808 91282975 -54306313 - HAL1 LINE L1 -1120 1387 1216 33 43 0 0 chr10 91284048 91284095 -54305193 + AT_rich Low_complexity Low_complexity 1 47 0 1196 217 31 38 chr10 91284509 91284928 -54304360 + MLT2B1 LTR ERVL 6 465 -50 193 20 41 61 chr10 91284945 91284994 -54304294 + (TA)n Simple_repeat Simple_repeat 1 48 0 236 136 91 0 chr10 91285016 91285060 -54304228 + MLT2B1 LTR ERVL 473 520 0 306 0 0 0 chr10 91285609 91285643 -54303645 + (TG)n Simple_repeat Simple_repeat 2 35 0 1370 219 146 33 chr10 91285649 91286046 -54303242 - MLT2B1 LTR ERVL -78 442 1 289 251 69 27 chr10 91286379 91286498 -54302790 - MIR SINE MIR -65 143 62 1083 157 6 0 chr10 91286534 91286712 -54302576 + L1MC1 LINE L1 6154 6332 -1 350 306 91 0 chr10 91287634 91287755 -54301533 - MIR SINE MIR -67 195 64 271 269 187 45 chr10 91288120 91288254 -54301034 - MIR SINE MIR -8 254 102 248 286 0 14 chr10 91288606 91288676 -54300612 + (TAA)n Simple_repeat Simple_repeat 2 70 0 26 0 0 0 chr10 91289653 91289679 -54299609 + AT_rich Low_complexity Low_complexity 1 26 0 232 327 39 0 chr10 91289911 91290015 -54299273 - L3 LINE CR1 -197 1380 1273 1870 129 31 7 chr10 91290295 91290582 -54298706 - AluSq SINE Alu -19 294 1 295 337 84 12 chr10 91290602 91290768 -54298520 - MIR SINE MIR -84 178 1 1762 181 17 15 chr10 91291418 91291783 -54297505 - MLT1A1 LTR MaLR 0 505 1 320 366 123 22 chr10 91291818 91292094 -54297194 - L2 LINE L2 0 3272 2969 906 290 137 7 chr10 91292213 91292658 -54296630 - LTR33A LTR ERVL -14 509 7 390 216 57 0 chr10 91293273 91293361 -54295927 + MER3 DNA MER1_type 117 209 0 303 253 72 17 chr10 91293390 91293514 -54295774 + MIR SINE MIR 28 155 -67 24 32 0 0 chr10 91293871 91293902 -54295386 + AT_rich Low_complexity Low_complexity 1 31 0 229 239 128 17 chr10 91294022 91294139 -54295149 - L1ME LINE L1 -218 5903 5774 2958 228 93 112 chr10 91295159 91296548 -54292740 - L1MDa LINE L1 -3367 3173 1759 1567 213 0 6 chr10 91296548 91296862 -54292426 + AluJo SINE Alu 1 312 0 2958 228 93 112 chr10 91296862 91297120 -54292168 - L1MDa LINE L1 -4781 1759 1 259 291 169 34 chr10 91298494 91298642 -54290646 - MER5A DNA MER1_type -1 188 21 * 269 305 168 23 chr10 91298514 91298645 -54290643 + MER5B DNA MER1_type 25 174 -4 260 161 49 49 chr10 91298922 91299003 -54290285 - LTR33A LTR ERVL -25 498 418 389 314 336 7 chr10 91299084 91299358 -54289930 - LTR50 LTR ERVL -300 495 132 446 286 0 0 chr10 91299399 91299504 -54289784 + MLT1F1 LTR MaLR 43 147 -420 332 304 15 114 chr10 91299529 91299730 -54289558 + MLT1F-int LTR MaLR 959 1139 -232 1343 239 93 27 chr10 91299970 91300467 -54288821 + MLT1F LTR MaLR 22 542 0 290 230 110 10 chr10 91300467 91300565 -54288723 - LTR50 LTR ERVL -682 113 6 1119 208 39 103 chr10 91300979 91301369 -54287919 + MLT1A1 LTR MaLR 1 365 0 542 117 0 0 chr10 91301424 91301518 -54287770 + L1MB3 LINE L1 6088 6181 -2 275 294 0 0 chr10 91301536 91301604 -54287684 - MIR SINE MIR -148 114 47 6019 235 107 8 chr10 91301635 91303154 -54286134 - L1M3c LINE L1 -4526 1615 1 720 54 0 0 chr10 91304407 91304500 -54284788 + (TTTC)n Simple_repeat Simple_repeat 1 93 0 314 224 178 9 chr10 91305914 91306021 -54283267 + MIR SINE MIR 52 176 -86 392 266 24 24 chr10 91306035 91306124 -54283164 - MIR SINE MIR -15 247 156 2500 195 70 6 chr10 91306124 91306641 -54282647 - MER44D DNA MER2_type 0 605 1 392 266 24 24 chr10 91306641 91306675 -54282613 - MIR SINE MIR -105 157 124 201 259 86 60 chr10 91307058 91307174 -54282114 - MIR SINE MIR -77 185 67 268 271 105 50 chr10 91308354 91308535 -54280753 + L2 LINE L2 3119 3309 -4 329 341 117 62 chr10 91308577 91309401 -54279887 - L2 LINE L2 0 3313 2428 1147 136 120 20 chr10 91309401 91309651 -54279637 - ORSL DNA AcHobo 0 275 1 329 341 117 62 chr10 91309651 91309810 -54279478 - L2 LINE L2 -885 2428 2279 323 303 95 56 chr10 91310010 91310347 -54278941 + MLT1K LTR MaLR 216 565 -23 338 325 98 12 chr10 91310386 91310549 -54278739 + MIR SINE MIR 86 262 0 287 311 148 22 chr10 91310984 91311119 -54278169 + L2 LINE L2 3121 3272 0 212 296 19 0 chr10 91311823 91311877 -54277411 - L2 LINE L2 -9 3263 3209 1730 164 79 108 chr10 91312028 91312509 -54276779 + MLT1C LTR MaLR 1 467 0 1361 172 51 25 chr10 91312708 91313022 -54276266 + MER33 DNA MER1_type 1 322 -2 229 259 51 63 chr10 91314346 91314504 -54274784 - L1ME LINE L1 -197 5924 5769 21 36 0 0 chr10 91314839 91314867 -54274421 + AT_rich Low_complexity Low_complexity 1 28 0 8252 29 6 0 chr10 91314878 91316649 -54272639 + L1PA3 LINE L1 4378 6162 0 241 197 20 1 chr10 91316649 91316715 -54272573 - L1ME LINE L1 -782 5384 5319 275 257 128 53 chr10 91317182 91317486 -54271802 + L1ME4a LINE L1 5795 6121 0 973 315 54 68 chr10 91317828 91318608 -54270680 - ERVL LTR ERVL -4210 1554 786 374 338 52 4 chr10 91318608 91318694 -54270594 - ERVL LTR ERVL -4973 681 601 1541 189 15 0 chr10 91318694 91318959 -54270329 + AluJo SINE Alu 1 269 -43 374 338 52 4 chr10 91318959 91319108 -54270180 - ERVL LTR ERVL -5053 601 421 5698 126 13 24 chr10 91319439 91320352 -54268936 - MER4D LTR ERV1 0 903 1 1058 270 56 22 chr10 91320392 91320748 -54268540 - MLT2E LTR ERVL 0 628 261 * 1269 260 118 11 chr10 91320740 91321119 -54268169 + MLT1G1 LTR MaLR 128 547 -48 593 232 113 52 chr10 91321119 91321313 -54267975 - MER58C DNA MER1_type 0 215 10 233 266 0 0 chr10 91321320 91321378 -54267910 + MLT1G1 LTR MaLR 498 584 0 415 305 42 75 chr10 91321625 91321864 -54267424 - MIR SINE MIR -6 256 26 317 291 13 0 chr10 91322299 91322378 -54266910 + Tigger7 DNA MER2_type 1 80 -653 * 1012 175 192 4 chr10 91322375 91322604 -54266684 - Tigger7 DNA MER2_type -2140 347 76 * 1773 160 27 15 chr10 91322602 91322934 -54266354 + Tigger7 DNA MER2_type 2143 2478 -9 249 277 142 82 chr10 91323622 91323904 -54265384 + MLT1I LTR MaLR 111 409 0 421 289 129 24 chr10 91324337 91324669 -54264619 - L1M4 LINE L1 -1479 4667 4301 1139 228 117 4 chr10 91324776 91325185 -54264103 + L1ME3 LINE L1 5694 6161 -9 243 170 40 70 chr10 91325203 91325303 -54263985 + L1ME3 LINE L1 5942 6038 -124 256 338 53 26 chr10 91325934 91326085 -54263203 + MIR SINE MIR 108 262 0 254 245 72 67 chr10 91326169 91326377 -54262911 + L1ME LINE L1 5542 5750 -371 435 335 57 10 chr10 91326385 91326579 -54262709 + L2 LINE L2 2847 3049 -264 466 243 27 0 chr10 91326579 91326690 -54262598 - L1M3f LINE L1 -5214 114 1 5520 245 38 30 chr10 91326690 91328757 -54260531 - L1M4 LINE L1 -849 5297 3215 278 160 0 0 chr10 91328751 91328801 -54260487 - L1MCa LINE L1 -6280 146 97 * 1273 215 54 0 chr10 91328815 91329131 -54260157 - L1MA4 LINE L1 -11 6289 5957 254 262 0 16 chr10 91329108 91329169 -54260119 - L1MCa LINE L1 -6360 66 7 * 422 168 56 0 chr10 91329150 91329275 -54260013 - L1MDa LINE L1 -4026 2514 2383 1054 183 103 26 chr10 91329292 91329410 -54259878 - L1MA9 LINE L1 -38 6274 6167 2438 86 0 13 chr10 91329410 91329723 -54259565 - AluY SINE Alu -2 309 1 1054 183 103 26 chr10 91329723 91329916 -54259372 - L1MA9 LINE L1 -145 6167 5939 * 1431 276 61 28 chr10 91329888 91330539 -54258749 - L1MDa LINE L1 -5268 1272 534 339 205 0 60 chr10 91330533 91330616 -54258672 - L1M3e LINE L1 -5121 1909 1832 * 1994 275 76 38 chr10 91330616 91331717 -54257571 - L1M3e LINE L1 -5878 1152 10 313 293 33 66 chr10 91331742 91331923 -54257365 - L1M4 LINE L1 -3317 2829 2655 1749 175 0 23 chr10 91332145 91332453 -54256835 - AluJo SINE Alu -11 301 1 562 301 88 13 chr10 91333002 91333241 -54256047 + MIR SINE MIR 6 262 0 1701 166 109 46 chr10 91334499 91334866 -54254422 + MLT1B LTR MaLR 1 390 0 760 311 12 12 chr10 91335877 91336131 -54253157 + MIR SINE MIR 9 262 0 300 245 41 31 chr10 91338013 91338111 -54251177 + MIR SINE MIR 56 154 -108 1432 172 86 11 chr10 91338834 91339102 -54250186 + AluJo SINE Alu 1 288 -24 1393 185 65 60 chr10 91339654 91340021 -54249267 + MLT1A2 LTR MaLR 4 372 -2 1686 198 73 43 chr10 91340838 91341328 -54247960 + MLT1D LTR MaLR 1 505 0 1808 154 13 89 chr10 91341503 91341898 -54247390 + MLT1A1 LTR MaLR 1 365 0 885 110 0 0 chr10 91342084 91342220 -54247068 - L1MA3 LINE L1 0 6305 6170 21 0 0 0 chr10 91342223 91342244 -54247044 + AT_rich Low_complexity Low_complexity 1 21 0 364 149 27 27 chr10 91342708 91342782 -54246506 - MLT1E1 LTR MaLR -401 253 180 1961 67 84 14 chr10 91342924 91343208 -54246080 - L1PA11 LINE L1 -4 6170 5867 2371 97 17 0 chr10 91343208 91343557 -54245731 + L1PA11 LINE L1 5493 5847 -327 2486 182 99 33 chr10 91343646 91343894 -54245394 - L1MC3 LINE L1 -1645 6140 5910 644 183 15 51 chr10 91343894 91344031 -54245257 - FLAM_C SINE Alu -1 132 1 2486 182 99 33 chr10 91344031 91344451 -54244837 - L1MC3 LINE L1 -1875 5910 5428 2210 80 0 0 chr10 91344465 91344740 -54244548 + AluY SINE Alu 22 296 -15 332 271 18 27 chr10 91344857 91345072 -54244216 - L1M4c LINE L1 -4827 1780 1413 212 200 0 0 chr10 91345482 91345517 -54243771 + MER91B DNA MER1_type 35 69 -121 202 283 0 0 chr10 91345940 91345993 -54243295 + MIR SINE MIR 210 262 0 239 354 31 67 chr10 91346838 91346973 -54242315 - MIR SINE MIR -61 147 25 225 319 49 40 chr10 91347590 91347746 -54241542 - MIR3 SINE MIR -29 179 20 232 192 0 19 chr10 91347784 91347836 -54241452 + T-rich Low_complexity Low_complexity 3 53 0 2100 148 7 0 chr10 91348137 91348447 -54240841 - AluJb SINE Alu 0 312 1 21 0 0 0 chr10 91349641 91349662 -54239626 + AT_rich Low_complexity Low_complexity 1 21 0 39 0 0 0 chr10 91350275 91350314 -54238974 + AT_rich Low_complexity Low_complexity 1 39 0 370 259 111 0 chr10 91351033 91351141 -54238147 + MIR3 SINE MIR 84 203 -5 38 68 0 0 chr10 91351211 91351284 -54238004 + AT_rich Low_complexity Low_complexity 1 73 0 1056 244 97 47 chr10 91351450 91351852 -54237436 - LTR41 LTR ERVL -344 429 8 189 0 0 0 chr10 91353219 91353240 -54236048 + (TG)n Simple_repeat Simple_repeat 1 21 0 216 400 15 7 chr10 91353916 91354051 -54235237 + MIR SINE MIR 51 186 -76 4404 144 32 35 chr10 91354836 91355364 -54233924 - L1MA9 LINE L1 0 6312 5785 2229 70 6 42 chr10 91355364 91355676 -54233612 - AluY SINE Alu -10 301 1 4404 144 32 35 chr10 91355676 91355959 -54233329 - L1MA9 LINE L1 -527 5785 5503 366 159 0 0 chr10 91355959 91356022 -54233266 + L1MA9 LINE L1 5414 5476 -692 307 307 197 0 chr10 91356131 91356268 -54233020 - MIR SINE MIR -36 226 63 351 304 18 0 chr10 91358248 91358360 -54230928 - MIR SINE MIR -109 153 40 241 273 40 10 chr10 91358424 91358523 -54230765 + CT-rich Low_complexity Low_complexity 3 104 0 514 245 14 27 chr10 91359514 91359661 -54229627 - MLT1G1 LTR MaLR 0 595 451 38 22 0 0 chr10 91360002 91360047 -54229241 + AT_rich Low_complexity Low_complexity 1 45 0 255 320 0 10 chr10 91360109 91360206 -54229082 + (TATATG)n Simple_repeat Simple_repeat 3 98 0 245 143 0 20 chr10 91360293 91360342 -54228946 + (TG)n Simple_repeat Simple_repeat 1 48 0 26 0 0 0 chr10 91361436 91361462 -54227826 + AT_rich Low_complexity Low_complexity 1 26 0 623 343 83 44 chr10 91361910 91362114 -54227174 + L1ME3A LINE L1 1438 1633 -4763 2294 108 0 0 chr10 91362114 91362420 -54226868 + AluSq SINE Alu 1 306 -7 623 343 83 44 chr10 91362420 91362440 -54226848 + L1ME3A LINE L1 1633 1651 -4745 216 97 0 0 chr10 91362440 91362471 -54226817 + (CA)n Simple_repeat Simple_repeat 1 31 0 623 343 83 44 chr10 91362471 91362992 -54226296 + L1ME3A LINE L1 1651 2213 -4183 595 299 101 16 chr10 91362992 91363694 -54225594 + L1ME3A LINE L1 2179 2940 -3275 472 301 65 14 chr10 91363784 91364060 -54225228 + L1ME3A LINE L1 4873 5162 -1053 780 178 138 0 chr10 91364062 91364214 -54225074 + AluSg/x SINE Alu 126 298 -12 916 242 150 37 chr10 91364387 91365035 -54224253 + L1ME3A LINE L1 5369 6089 -150 240 196 0 0 chr10 91365040 91365096 -54224192 + L1ME3A LINE L1 6158 6213 -26 5208 132 9 35 chr10 91366291 91367202 -54222086 - MER49 LTR ERV1 -33 890 4 411 239 239 17 chr10 91368423 91368603 -54220685 - MIR SINE MIR -10 252 33 456 336 0 0 chr10 91370991 91371116 -54218172 - MIR SINE MIR -90 172 48 344 356 7 7 chr10 91372208 91372267 -54217021 + (TG)n Simple_repeat Simple_repeat 1 59 -90 189 74 0 0 chr10 91372267 91372294 -54216994 + (CATG)n Simple_repeat Simple_repeat 2 28 0 344 356 7 7 chr10 91372294 91372383 -54216905 + (TG)n Simple_repeat Simple_repeat 58 149 0 21 57 0 0 chr10 91372988 91373023 -54216265 + AT_rich Low_complexity Low_complexity 1 35 0 212 319 19 38 chr10 91373116 91373276 -54216012 + L2 LINE L2 2819 2975 -339 2815 171 129 0 chr10 91373546 91374135 -54215153 + LTR51 LTR ERV1 3 667 -4 2280 222 25 61 chr10 91374308 91374398 -54214890 + LTR9 LTR ERV1 8 100 -512 1565 111 0 0 chr10 91374398 91374606 -54214682 - AluSq SINE Alu -1 312 105 2280 222 25 61 chr10 91374606 91375125 -54214163 + LTR9 LTR ERV1 100 612 0 757 241 113 80 chr10 91375830 91376369 -54212919 + MER34B LTR ERV1 6 562 -3 228 235 0 0 chr10 91376459 91376510 -54212778 - L2 LINE L2 -85 3187 3137 2003 207 45 68 chr10 91376680 91377327 -54211961 - MER92B LTR ERV1 -4 632 1 266 298 46 23 chr10 91377328 91377459 -54211829 + MIR SINE MIR 114 247 -15 298 389 0 15 chr10 91378352 91378483 -54210805 + MIR SINE MIR 28 156 -106 612 205 0 0 chr10 91378486 91378603 -54210685 - L1MD2 LINE L1 -367 5992 5876 * 2223 210 17 28 chr10 91378601 91379134 -54210154 - L1MA10 LINE L1 -9 6325 5799 1081 165 0 0 chr10 91379262 91379438 -54209850 - L1MA10 LINE L1 -520 5771 5596 21 0 0 0 chr10 91379476 91379497 -54209791 + AT_rich Low_complexity Low_complexity 1 21 0 248 301 173 47 chr10 91379557 91379986 -54209302 - LTR33A LTR ERVL -37 486 4 1905 264 56 119 chr10 91380017 91381314 -54207974 - L2 LINE L2 0 3313 626 417 320 113 10 chr10 91381386 91381589 -54207699 + MIR SINE MIR 5 228 -34 815 208 69 6 chr10 91381664 91381837 -54207451 - MER5A DNA MER1_type -5 184 1 324 203 25 25 chr10 91381837 91381916 -54207372 + MER5A DNA MER1_type 110 188 -1 689 241 99 59 chr10 91382260 91382704 -54206584 + LTR37B LTR ERV1 7 468 0 24 53 0 0 chr10 91383510 91383548 -54205740 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr10 91384173 91384195 -54205093 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr10 91384211 91384234 -54205054 + AT_rich Low_complexity Low_complexity 1 23 0 1449 199 100 82 chr10 91386122 91386277 -54203011 + L1MD1 LINE L1 18 169 -6371 2239 108 0 0 chr10 91386277 91386572 -54202716 + AluSx SINE Alu 12 306 -6 1449 199 100 82 chr10 91386572 91386878 -54202410 + L1MD1 LINE L1 169 487 -6053 4961 231 45 41 chr10 91386896 91387184 -54202104 + L1MD1 LINE L1 3770 4055 -2581 351 0 0 0 chr10 91387184 91387223 -54202065 + (TAAA)n Simple_repeat Simple_repeat 4 42 0 4961 231 45 41 chr10 91387223 91388984 -54200304 + L1MD1 LINE L1 4055 5818 -818 2048 125 18 0 chr10 91388984 91389264 -54200024 + AluSq SINE Alu 1 285 -28 4961 231 45 41 chr10 91389264 91390081 -54199207 + L1MD1 LINE L1 5818 6631 -5 4926 36 2 0 chr10 91390642 91391230 -54198058 - L1PA4 LINE L1 -3 6152 5564 3522 8 0 0 chr10 91391894 91392291 -54196997 + L1HS LINE L1 5759 6155 0 371 243 18 27 chr10 91392346 91392457 -54196831 + L1M4 LINE L1 4080 4189 -1957 287 242 74 11 chr10 91392480 91392575 -54196713 - L1MC4a LINE L1 -1633 6175 6075 1001 196 0 6 chr10 91392665 91392838 -54196450 - AluJb SINE Alu -17 295 124 2729 217 47 12 chr10 91394080 91394888 -54194400 + L1MB3 LINE L1 4074 4958 -1188 2017 134 0 7 chr10 91394888 91395178 -54194110 - AluSx SINE Alu -24 288 1 3491 195 82 16 chr10 91395180 91395980 -54193308 + L1MB3 LINE L1 5318 6170 -13 523 263 8 0 chr10 91396512 91396630 -54192658 - MER45A DNA AcHobo 0 178 60 378 313 102 70 chr10 91396676 91397053 -54192235 - L2 LINE L2 -175 3138 2757 319 309 139 22 chr10 91399078 91399308 -54189980 - MIR SINE MIR 0 262 6 1253 177 5 5 chr10 91400087 91400302 -54188986 + AluJo SINE Alu 78 292 -20 1935 154 66 6 chr10 91400636 91400968 -54188320 + MSTB LTR MaLR 75 426 0 226 179 51 39 chr10 91401231 91401309 -54187979 - HAL1b LINE L1 -336 1012 934 * 1090 167 42 94 chr10 91401305 91401354 -54187934 + L1MC1 LINE L1 6056 6106 -227 1548 132 45 8 chr10 91401354 91401597 -54187691 + AluSg SINE Alu 55 306 -4 1090 167 42 94 chr10 91401597 91401679 -54187609 + L1MC1 LINE L1 6106 6191 -142 2238 90 3 16 chr10 91401679 91401991 -54187297 - AluSc SINE Alu -1 308 1 1090 167 42 94 chr10 91401991 91402146 -54187142 + L1MC1 LINE L1 6191 6328 -5 677 280 88 70 chr10 91402148 91402991 -54186297 - HAL1b LINE L1 -395 953 96 9015 246 43 18 chr10 91403383 91408911 -54180377 - L1MA8 LINE L1 -3 7707 2017 1856 234 14 53 chr10 91410177 91410669 -54178619 - L1MA8 LINE L1 -6550 939 467 21 0 0 0 chr10 91410897 91410918 -54178370 + AT_rich Low_complexity Low_complexity 1 21 0 390 222 62 0 chr10 91410923 91411001 -54178287 + MER67A LTR ERV1 1 83 -460 1674 236 32 26 chr10 91411001 91411094 -54178194 + MER67A LTR ERV1 3 94 -449 2518 154 42 2 chr10 91411094 91411541 -54177747 + MER4C LTR ERV1 1 465 0 1674 236 32 26 chr10 91411541 91411950 -54177338 + MER67A LTR ERV1 94 543 0 471 259 29 12 chr10 91411960 91412130 -54177158 + L1M4 LINE L1 4509 4681 -1465 606 279 77 0 chr10 91412159 91412342 -54176946 - MER67A LTR ERV1 -69 474 278 246 308 61 57 chr10 91412357 91412605 -54176683 + L1M4 LINE L1 4740 4988 -1158 21 36 0 0 chr10 91412832 91412860 -54176428 + AT_rich Low_complexity Low_complexity 1 28 0 289 358 43 0 chr10 91412963 91413125 -54176163 - MIR SINE MIR -6 256 88 27 73 0 0 chr10 91413313 91413368 -54175920 + AT_rich Low_complexity Low_complexity 1 55 0 2274 122 24 16 chr10 91413481 91413851 -54175437 - THE1C LTR MaLR 0 375 3 8766 147 43 39 chr10 91413853 91415384 -54173904 - THE1C-int LTR MaLR 0 1580 43 * 39307 77 11 11 chr10 91415369 91420912 -54168376 - L1P2 LINE L1 -580 5574 13 326 243 29 15 chr10 91420925 91421061 -54168227 - L1M4 LINE L1 -771 5375 5238 274 314 48 9 chr10 91421395 91421500 -54167788 + MIR SINE MIR 94 202 -60 1745 254 55 67 chr10 91421878 91422889 -54166399 + L1MEc LINE L1 2207 3162 -3053 3789 238 61 36 chr10 91422907 91423966 -54165322 + L1 LINE L1 1 1378 -5831 1978 164 41 16 chr10 91424005 91424371 -54164917 + THE1C LTR MaLR 1 375 0 2618 97 81 107 chr10 91424371 91424877 -54164411 + THE1C-int LTR MaLR 1 493 -1087 453 136 0 0 chr10 91424880 91424946 -54164342 - AluJ/FLAM SINE Alu -233 79 14 1168 175 23 9 chr10 91424946 91425163 -54164125 + AluSg/x SINE Alu 82 301 -9 1959 170 3 23 chr10 91425163 91425505 -54163783 + THE1C-int LTR MaLR 500 834 -746 928 165 55 46 chr10 91425510 91425728 -54163560 - THE1C LTR MaLR -152 223 4 9011 135 43 43 chr10 91425731 91427311 -54161977 - THE1C-int LTR MaLR 0 1580 1 1349 194 114 15 chr10 91427311 91427652 -54161636 - THE1C LTR MaLR 0 375 1 3785 182 7 14 chr10 91427655 91427836 -54161452 + THE1C-int LTR MaLR 933 1114 -537 2095 162 34 17 chr10 91427836 91428194 -54161094 - THE1B LTR MaLR 0 364 1 3785 182 7 14 chr10 91428194 91428736 -54160552 + THE1C-int LTR MaLR 1114 1651 0 1830 215 38 33 chr10 91428736 91428929 -54160359 + MSTB LTR MaLR 1 192 -234 2256 122 0 0 chr10 91428929 91429232 -54160056 + AluSx SINE Alu 1 303 -9 1830 215 38 33 chr10 91429232 91429462 -54159826 + MSTB LTR MaLR 192 426 0 2547 179 38 2 chr10 91429462 91430086 -54159202 + L1 LINE L1 2675 3318 -3890 9460 204 25 14 chr10 91430100 91432566 -54156722 + L1 LINE L1 3971 6465 -743 2970 175 15 64 chr10 91432581 91433383 -54155905 - MER83B-int LTR ERV1 -3048 3710 2948 1233 221 46 49 chr10 91433458 91434183 -54155105 - MER83B-int LTR ERV1 -3528 1595 866 851 283 64 47 chr10 91434218 91434625 -54154663 - MER83B-int LTR ERV1 -4055 2276 1863 486 185 33 53 chr10 91434613 91434764 -54154524 - MER83B-int LTR ERV1 -2595 2285 2138 * 977 179 0 22 chr10 91435110 91435143 -54154145 - LTR47A LTR ERVL -1 451 419 2035 141 35 19 chr10 91435143 91435512 -54153776 + THE1C LTR MaLR 1 375 0 977 179 0 22 chr10 91435512 91435657 -54153631 - LTR47A LTR ERVL -33 419 277 2057 275 66 17 chr10 91435657 91436669 -54152619 + L1M4 LINE L1 3625 4686 -1460 1887 173 5 32 chr10 91436775 91437277 -54152011 + L1MB3 LINE L1 3628 5674 -647 520 226 0 0 chr10 91437947 91438053 -54151235 + U6 snRNA snRNA 1 106 -1 825 149 19 12 chr10 91438053 91438214 -54151074 + L1MB3 LINE L1 5997 6158 -25 303 224 37 84 chr10 91438215 91438322 -54150966 + MER65A LTR ERV1 2 103 -342 4545 214 58 12 chr10 91438876 91440319 -54148969 - L1MD1 LINE L1 0 6242 4637 1908 168 0 0 chr10 91440319 91440622 -54148666 - AluJo SINE Alu -9 303 1 4545 214 58 12 chr10 91440622 91441736 -54147552 - L1MD1 LINE L1 -1605 4637 3576 196 321 37 25 chr10 91442661 91442742 -54146546 - L2 LINE L2 -246 3026 2945 21 0 0 0 chr10 91443422 91443443 -54145845 + AT_rich Low_complexity Low_complexity 1 21 0 1215 269 94 12 chr10 91444003 91444430 -54144858 + L1MDb LINE L1 96 557 -5852 2448 193 20 12 chr10 91444471 91445032 -54144256 + L1MDb LINE L1 653 1217 -5192 1424 265 18 48 chr10 91446358 91446868 -54142420 + L1PA15-16 LINE L1 13 504 -6345 2132 107 101 18 chr10 91446868 91447204 -54142084 - THE1B LTR MaLR 0 364 1 1424 265 18 48 chr10 91447204 91447294 -54141994 + L1PA15-16 LINE L1 504 595 -6254 628 331 32 53 chr10 91447453 91448050 -54141238 + L1M2 LINE L1 687 1558 -5290 3579 238 40 27 chr10 91448062 91449175 -54140113 + L1M2 LINE L1 1481 2578 -4270 1556 204 4 14 chr10 91449175 91449479 -54139809 + AluSx SINE Alu 5 305 0 3579 238 40 27 chr10 91449479 91449784 -54139504 + L1M2 LINE L1 2578 2878 -3970 2141 99 0 7 chr10 91449784 91450101 -54139187 + AluY SINE Alu 1 315 0 3579 238 40 27 chr10 91450101 91450278 -54139010 + L1M2 LINE L1 2878 3051 -3797 1869 128 8 0 chr10 91450278 91450543 -54138745 + AluSq SINE Alu 31 297 -16 2420 51 3 3 chr10 91450545 91450839 -54138449 + AluY SINE Alu 1 294 -17 3579 238 40 27 chr10 91450839 91451640 -54137648 + L1M2 LINE L1 3051 3916 -2932 1842 168 26 12 chr10 91451642 91451982 -54137306 + L1PB4 LINE L1 5812 6156 0 337 303 50 43 chr10 91452026 91452307 -54136981 - ERVL LTR ERVL -2734 3030 2748 1111 313 64 11 chr10 91452351 91452789 -54136499 + LTR33 LTR ERVL 53 513 -8 457 329 61 27 chr10 91453322 91453617 -54135671 - ERVL LTR ERVL -3699 2065 1761 268 240 50 25 chr10 91453974 91454000 -54135288 - L1MA4A LINE L1 0 6303 6278 2955 165 82 3 chr10 91454000 91454618 -54134670 - L1PB4 LINE L1 -14 6844 6178 40514 37 22 2 chr10 91454649 91460683 -54128605 - L1PA3 LINE L1 0 6155 1 7136 207 20 18 chr10 91460685 91460868 -54128420 - L1PB4 LINE L1 -671 6187 6006 2233 129 0 0 chr10 91460868 91461171 -54128117 - AluSg SINE Alu -7 303 1 7136 207 20 18 chr10 91461171 91462970 -54126318 - L1PB4 LINE L1 -852 6006 4190 2943 283 32 26 chr10 91462992 91464384 -54124904 - L1PB4 LINE L1 -4358 2490 998 1345 240 23 171 chr10 91464546 91465824 -54123464 - L1PB4 LINE L1 -5752 1097 13 8115 178 23 11 chr10 91465840 91468507 -54120781 - L1MA4 LINE L1 -7 6293 3596 776 195 7 0 chr10 91468513 91468667 -54120621 - L1PB4 LINE L1 0 6338 6184 * 6931 168 16 1 chr10 91468653 91470686 -54118602 + L1PA13 LINE L1 4090 6144 -19 3009 191 98 29 chr10 91470699 91470924 -54118364 - L1PB4 LINE L1 -129 6209 6001 369 0 0 0 chr10 91470924 91470965 -54118323 + (TG)n Simple_repeat Simple_repeat 2 42 0 3009 191 98 29 chr10 91470965 91471293 -54117995 - L1PB4 LINE L1 -337 6001 5697 5239 198 39 2 chr10 91471293 91473234 -54116054 - L1PA15 LINE L1 -2 7582 5580 3009 191 98 29 chr10 91473234 91474084 -54115204 - L1PB4 LINE L1 -641 5697 2678 1946 224 13 13 chr10 91474078 91474627 -54114661 - L1PA15 LINE L1 -4476 3089 2553 * 1917 165 47 30 chr10 91474637 91475166 -54114122 - MLT2A2 LTR ERVL -8 546 2 6367 158 57 9 chr10 91475177 91476411 -54112877 - L1PB4 LINE L1 -4065 1263 1 2044 161 54 61 chr10 91476547 91476596 -54112692 - MSTB LTR MaLR 0 426 378 2515 72 0 3 chr10 91476596 91476902 -54112386 + AluSg SINE Alu 1 305 -5 2044 161 54 61 chr10 91476902 91477281 -54112007 - MSTB LTR MaLR -48 378 1 622 328 82 19 chr10 91477470 91478291 -54110997 + ERVL LTR ERVL 3338 4247 -1517 321 26 0 0 chr10 91478614 91478652 -54110636 + (TG)n Simple_repeat Simple_repeat 1 38 0 434 330 61 37 chr10 91478793 91479251 -54110037 + ERVL LTR ERVL 4912 5380 -384 248 317 0 0 chr10 91480005 91480087 -54109201 + LTR67 LTR ERVL 435 516 -41 258 242 187 22 chr10 91480140 91480231 -54109057 + L2 LINE L2 2804 2909 -363 504 0 0 0 chr10 91480242 91480298 -54108990 + (CA)n Simple_repeat Simple_repeat 1 56 0 621 197 104 67 chr10 91480596 91480789 -54108499 + MER45R DNA AcHobo 1 200 -1381 3882 188 87 12 chr10 91480921 91481962 -54107326 + MER45R DNA AcHobo 436 1553 -28 2054 111 4 7 chr10 91482097 91482376 -54106912 + AluSx SINE Alu 1 278 -34 306 0 0 0 chr10 91482377 91482411 -54106877 + (CA)n Simple_repeat Simple_repeat 1 34 0 457 323 141 22 chr10 91482582 91482858 -54106430 + L2 LINE L2 3005 3313 0 312 287 10 20 chr10 91484209 91484310 -54104978 - MIR SINE MIR -72 190 91 27 0 0 0 chr10 91484432 91484459 -54104829 + AT_rich Low_complexity Low_complexity 1 27 0 196 311 52 118 chr10 91485147 91485453 -54103835 + L2 LINE L2 2986 3271 -1 337 322 34 7 chr10 91486104 91486250 -54103038 + L1ME LINE L1 5636 5785 -336 417 341 0 6 chr10 91486638 91486805 -54102483 + L2 LINE L2 1802 1967 -1347 1274 201 8 8 chr10 91486805 91487044 -54102244 - MER8 DNA MER2_type 0 239 1 407 241 0 0 chr10 91487082 91487169 -54102119 + MER58 DNA MER1_type 168 254 -87 1260 299 102 30 chr10 91487173 91487541 -54101747 + L2 LINE L2 1991 2331 -983 315 0 0 0 chr10 91487541 91487576 -54101712 + (CA)n Simple_repeat Simple_repeat 1 35 0 1260 299 102 30 chr10 91487576 91487873 -54101415 + L2 LINE L2 2331 2704 -610 345 341 198 9 chr10 91487901 91488118 -54101170 + L2 LINE L2 2804 3061 -211 571 340 171 23 chr10 91488709 91489398 -54099890 + L2 LINE L2 1216 2006 -1308 486 139 0 0 chr10 91492483 91492569 -54096719 + (TC)n Simple_repeat Simple_repeat 1 86 0 326 266 61 11 chr10 91493007 91493134 -54096154 - MIR SINE MIR -68 140 11 2637 100 3 16 chr10 91494334 91494703 -54094585 + THE1B LTR MaLR 1 364 0 799 292 52 35 chr10 91495232 91495273 -54094015 - MLT1I LTR MaLR 0 409 370 390 91 0 0 chr10 91495273 91495328 -54093960 + (CA)n Simple_repeat Simple_repeat 2 56 0 799 292 52 35 chr10 91495328 91495653 -54093635 - MLT1I LTR MaLR -39 370 37 2153 103 0 10 chr10 91495684 91495975 -54093313 + AluSg SINE Alu 1 288 -22 258 272 117 10 chr10 91496111 91496214 -54093074 - MIR SINE MIR -78 130 17 228 35 0 0 chr10 91496295 91496324 -54092964 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 629 260 148 9 chr10 91499201 91499424 -54089864 - MIR SINE MIR -7 255 2 402 226 43 67 chr10 91500345 91500509 -54088779 + L2 LINE L2 2995 3154 -159 527 190 25 41 chr10 91500562 91500683 -54088605 + MLT1D LTR MaLR 1 119 -386 718 230 69 18 chr10 91500693 91500859 -54088429 + MLT1D LTR MaLR 275 456 -49 1679 224 77 59 chr10 91500859 91501403 -54087885 + MLT2B3 LTR ERVL 1 554 0 718 230 69 18 chr10 91501403 91501453 -54087835 + MLT1D LTR MaLR 456 502 -3 335 263 25 0 chr10 91501459 91501539 -54087749 + L2 LINE L2 3232 3313 0 204 280 65 21 chr10 91501665 91501758 -54087530 + L2 LINE L2 1394 1490 -1824 * 226 320 80 56 chr10 91501711 91501836 -54087452 - L2 LINE L2 -7 3265 3138 185 250 0 0 chr10 91501876 91501916 -54087372 - L2 LINE L2 -16 3256 3217 209 204 0 74 chr10 91501988 91502042 -54087246 + MIR SINE MIR 92 141 -67 1301 209 20 20 chr10 91502100 91502401 -54086887 + MLT2D LTR ERVL 1 301 -113 197 262 97 10 chr10 91502452 91502555 -54086733 + L2 LINE L2 3075 3186 -127 352 220 209 0 chr10 91502619 91502710 -54086578 + MLT2D LTR ERVL 305 414 0 360 337 9 3 chr10 91502783 91502918 -54086370 - MIR SINE MIR -62 146 22 4608 272 79 21 chr10 91503496 91505711 -54083577 + L1ME LINE L1 37 2392 -3823 2373 104 0 0 chr10 91505711 91506019 -54083269 + AluSg SINE Alu 1 308 -2 4608 272 79 21 chr10 91506019 91506409 -54082879 + L1ME LINE L1 2392 2758 -3457 403 232 26 53 chr10 91506424 91506575 -54082713 - L1M4 LINE L1 -3355 2791 2645 2938 246 36 1 chr10 91506690 91507582 -54081706 + L1ME LINE L1 4271 5193 -1022 239 89 156 0 chr10 91507586 91507631 -54081657 + MER68 LTR ERV1 1 52 -510 2480 209 19 8 chr10 91507640 91508158 -54081130 + MER68 LTR ERV1 29 552 -10 556 210 95 93 chr10 91508158 91508696 -54080592 + L1ME LINE L1 5198 5755 -478 270 155 35 0 chr10 91508695 91508753 -54080535 + L1MA10 LINE L1 6268 6327 -7 * 2002 115 0 7 chr10 91508775 91509045 -54080243 + AluSx SINE Alu 8 275 -37 225 0 0 0 chr10 91509049 91509074 -54080214 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 1922 123 0 24 chr10 91509693 91509986 -54079302 + AluSx SINE Alu 1 286 -26 3337 85 2 0 chr10 91510022 91510482 -54078806 - MER41A LTR ERV1 0 554 94 239 0 32 0 chr10 91511036 91511067 -54078221 + (CA)n Simple_repeat Simple_repeat 2 33 0 2112 131 63 10 chr10 91511441 91511648 -54077640 - MER41C LTR ERV1 0 554 359 339 25 0 0 chr10 91511648 91511688 -54077600 + (TG)n Simple_repeat Simple_repeat 1 40 0 2112 131 63 10 chr10 91511688 91511876 -54077412 - MER41C LTR ERV1 -195 359 138 1492 189 28 21 chr10 91514066 91514357 -54074931 + AluJb SINE Alu 1 293 -19 1592 161 0 0 chr10 91514490 91514745 -54074543 + AluSx SINE Alu 45 299 -13 405 0 0 0 chr10 91515391 91515436 -54073852 + (CA)n Simple_repeat Simple_repeat 2 46 0 2115 115 0 3 chr10 91515437 91515723 -54073565 - AluSg SINE Alu -25 285 1 22 0 0 0 chr10 91515726 91515748 -54073540 + AT_rich Low_complexity Low_complexity 1 22 0 2250 86 83 0 chr10 91515805 91516154 -54073134 - L1PA13 LINE L1 0 6163 5786 422 368 25 2 chr10 91516305 91516669 -54072619 - L1PBb LINE L1 -5386 1720 1256 908 167 71 111 chr10 91516901 91517343 -54071945 + L1M3 LINE L1 5276 5705 -463 1692 234 14 53 chr10 91518335 91518827 -54070461 - L1PBb LINE L1 -6550 480 8 21 0 0 0 chr10 91519055 91519076 -54070212 + AT_rich Low_complexity Low_complexity 1 21 0 363 222 62 0 chr10 91519081 91519159 -54070129 + MER67A LTR ERV1 1 83 -460 1563 216 43 23 chr10 91519159 91519252 -54070036 + MER67A LTR ERV1 3 93 -450 2493 154 42 2 chr10 91519252 91519699 -54069589 + MER4C LTR ERV1 1 465 0 1563 216 43 23 chr10 91519699 91520108 -54069180 + MER67A LTR ERV1 93 543 0 425 259 29 12 chr10 91520118 91520288 -54069000 + L1M4 LINE L1 4509 4681 -1465 551 279 77 0 chr10 91520317 91520500 -54068788 - MER67A LTR ERV1 -69 474 278 410 303 73 61 chr10 91520515 91520777 -54068511 + L1M4 LINE L1 4740 5004 -1142 21 36 0 0 chr10 91520988 91521016 -54068272 + AT_rich Low_complexity Low_complexity 1 28 0 276 358 43 0 chr10 91521119 91521281 -54068007 - MIR SINE MIR -6 256 88 27 73 0 0 chr10 91521469 91521524 -54067764 + AT_rich Low_complexity Low_complexity 1 55 0 2278 122 24 16 chr10 91521637 91522007 -54067281 - THE1C LTR MaLR 0 375 3 8232 148 43 39 chr10 91522009 91523540 -54065748 - THE1C-int LTR MaLR 0 1580 43 32236 57 15 9 chr10 91523541 91528995 -54060293 - L1P2 LINE L1 -588 5566 1 7125 207 20 18 chr10 91528997 91529180 -54060108 - L1P5 LINE L1 -671 5542 5361 2224 129 0 0 chr10 91529180 91529482 -54059806 - AluSg SINE Alu -8 302 1 7125 207 20 18 chr10 91529482 91531281 -54058007 - L1P5 LINE L1 -852 5361 3545 2943 283 32 26 chr10 91531303 91532695 -54056593 - L1P5 LINE L1 -4358 1845 353 1339 239 24 171 chr10 91532857 91534134 -54055154 - L1M2b LINE L1 -5752 1097 13 8085 178 23 12 chr10 91534150 91536818 -54052470 - L1MA4 LINE L1 -7 7712 5015 776 195 7 0 chr10 91536824 91536978 -54052310 - L1PB4 LINE L1 0 6156 6002 * 6944 168 16 1 chr10 91536964 91538997 -54050291 + L1PA13 LINE L1 4090 6144 -19 2030 150 63 10 chr10 91539010 91539235 -54050053 - L1PB4 LINE L1 -129 6027 5815 387 0 0 0 chr10 91539235 91539278 -54050010 + (TG)n Simple_repeat Simple_repeat 2 44 0 2030 150 63 10 chr10 91539278 91539465 -54049823 - L1PB4 LINE L1 -341 5815 5593 577 240 45 0 chr10 91539440 91539594 -54049694 - L1MA4 LINE L1 -2557 5008 4848 * 5029 174 36 8 chr10 91539606 91541555 -54047733 - L1PA15 LINE L1 -2 6163 4161 2680 213 132 2 chr10 91541549 91542405 -54046883 - L1MA4 LINE L1 -2684 4881 3915 * 1934 226 13 11 chr10 91542399 91542947 -54046341 - L1MA4 LINE L1 -4476 3089 2553 * 1966 163 48 29 chr10 91542957 91543485 -54045803 - MLT2A2 LTR ERVL -8 546 2 6367 158 57 9 chr10 91543496 91544730 -54044558 - L1M3f LINE L1 -4065 1263 1 2044 161 54 61 chr10 91544866 91544915 -54044373 - MSTB LTR MaLR 0 426 378 2364 93 0 7 chr10 91544915 91545225 -54044063 + AluY SINE Alu 1 308 -3 2044 161 54 61 chr10 91545225 91545604 -54043684 - MSTB LTR MaLR -48 378 1 632 326 82 19 chr10 91545793 91546614 -54042674 + ERVL LTR ERVL 3338 4247 -1517 303 28 0 0 chr10 91546937 91546973 -54042315 + (TG)n Simple_repeat Simple_repeat 1 36 0 434 330 61 37 chr10 91547114 91547572 -54041716 + ERVL LTR ERVL 4912 5380 -384 248 317 0 0 chr10 91548326 91548408 -54040880 + LTR67 LTR ERVL 435 516 -41 267 231 187 22 chr10 91548461 91548552 -54040736 + L2 LINE L2 2804 2909 -363 378 0 0 0 chr10 91548563 91548605 -54040683 + (CA)n Simple_repeat Simple_repeat 1 42 0 621 197 104 67 chr10 91548902 91549095 -54040193 + MER45R DNA AcHobo 1 200 -1381 3882 188 87 12 chr10 91549227 91550268 -54039020 + MER45R DNA AcHobo 436 1553 -28 2054 111 4 7 chr10 91550403 91550682 -54038606 + AluSx SINE Alu 1 278 -34 306 0 0 0 chr10 91550683 91550717 -54038571 + (CA)n Simple_repeat Simple_repeat 1 34 0 457 323 141 22 chr10 91550888 91551164 -54038124 + L2 LINE L2 3005 3313 0 312 287 10 20 chr10 91552516 91552617 -54036671 - MIR SINE MIR -72 190 91 27 0 0 0 chr10 91552739 91552766 -54036522 + AT_rich Low_complexity Low_complexity 1 27 0 337 322 34 7 chr10 91554424 91554570 -54034718 + L1ME LINE L1 5636 5785 -336 432 335 0 6 chr10 91554958 91555125 -54034163 + L2 LINE L2 1802 1967 -1347 1274 201 8 8 chr10 91555125 91555364 -54033924 - MER8 DNA MER2_type 0 239 1 407 241 0 0 chr10 91555402 91555489 -54033799 + MER58 DNA MER1_type 168 254 -87 1274 305 98 25 chr10 91555493 91555861 -54033427 + L2 LINE L2 1991 2331 -983 315 0 0 0 chr10 91555861 91555896 -54033392 + (CA)n Simple_repeat Simple_repeat 1 35 0 1274 305 98 25 chr10 91555896 91556193 -54033095 + L2 LINE L2 2331 2704 -610 345 341 198 9 chr10 91556221 91556438 -54032850 + L2 LINE L2 2804 3061 -211 565 330 177 29 chr10 91557029 91557718 -54031570 + L2 LINE L2 1216 2006 -1308 468 143 0 0 chr10 91560804 91560888 -54028400 + (TC)n Simple_repeat Simple_repeat 1 84 0 326 266 61 11 chr10 91561327 91561454 -54027834 - MIR SINE MIR -68 140 11 2623 103 3 16 chr10 91562654 91563023 -54026265 + THE1B LTR MaLR 1 364 0 799 292 52 35 chr10 91563552 91563593 -54025695 - MLT1I LTR MaLR 0 409 370 390 91 0 0 chr10 91563593 91563648 -54025640 + (CA)n Simple_repeat Simple_repeat 2 56 0 799 292 52 35 chr10 91563648 91563973 -54025315 - MLT1I LTR MaLR -39 370 37 2127 110 0 10 chr10 91564004 91564295 -54024993 + AluSg SINE Alu 1 288 -22 258 272 117 10 chr10 91564431 91564534 -54024754 - MIR SINE MIR -78 130 17 228 35 0 0 chr10 91564615 91564644 -54024644 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 629 260 148 9 chr10 91567523 91567746 -54021542 - MIR SINE MIR -7 255 2 402 226 43 67 chr10 91568666 91568830 -54020458 + L2 LINE L2 2995 3154 -159 527 190 25 41 chr10 91568883 91569004 -54020284 + MLT1D LTR MaLR 1 119 -386 712 230 69 18 chr10 91569014 91569180 -54020108 + MLT1D LTR MaLR 275 456 -49 1731 227 65 60 chr10 91569180 91569731 -54019557 + MLT2B3 LTR ERVL 1 554 0 712 230 69 18 chr10 91569731 91569781 -54019507 + MLT1D LTR MaLR 456 502 -3 335 263 25 0 chr10 91569787 91569867 -54019421 + L2 LINE L2 3232 3313 0 1987 130 6 29 chr10 91570438 91570753 -54018535 - AluSp SINE Alu -5 308 1 26 0 0 0 chr10 91571409 91571435 -54017853 + AT_rich Low_complexity Low_complexity 1 26 0 227 149 0 21 chr10 91572530 91572577 -54016711 + (CA)n Simple_repeat Simple_repeat 1 46 0 255 320 0 10 chr10 91572664 91572761 -54016527 + (CATATA)n Simple_repeat Simple_repeat 3 98 0 38 22 0 0 chr10 91572823 91572868 -54016420 + AT_rich Low_complexity Low_complexity 1 45 0 514 245 14 27 chr10 91573209 91573356 -54015932 + MLT1G1 LTR MaLR 451 595 0 241 273 40 10 chr10 91574347 91574446 -54014842 + GA-rich Low_complexity Low_complexity 3 104 0 351 304 18 0 chr10 91574510 91574622 -54014666 + MIR SINE MIR 40 153 -109 307 307 197 0 chr10 91576602 91576739 -54012549 + MIR SINE MIR 63 226 -36 371 186 0 0 chr10 91576848 91576918 -54012370 - L1M3 LINE L1 -692 5476 5407 * 1655 152 3 3 chr10 91576911 91577194 -54012094 + L1M2 LINE L1 5503 5785 -527 2200 81 7 7 chr10 91577194 91577533 -54011755 + AluY SINE Alu 1 311 0 1244 142 0 0 chr10 91577533 91577709 -54011579 + AluSg/x SINE Alu 134 309 -3 673 140 26 0 chr10 91577709 91577823 -54011465 + Tigger1 DNA MER2_type 2084 2200 -218 491 327 73 14 chr10 91577823 91578178 -54011110 - L1ME LINE L1 -5175 895 520 2228 136 38 20 chr10 91578838 91579288 -54010000 - L1M2 LINE L1 -591 5721 5264 562 213 24 52 chr10 91579292 91579503 -54009785 - L1M2 LINE L1 -1032 5114 4910 1135 128 10 57 chr10 91580202 91580498 -54008790 - L1P LINE L1 -2784 3362 3081 569 151 38 0 chr10 91581156 91581262 -54008026 - AluSq/x SINE Alu -203 110 1 361 269 19 0 chr10 91581603 91581711 -54007577 + L1MDa LINE L1 1 110 -6430 749 241 47 82 chr10 91581758 91582161 -54007127 + L1MDa LINE L1 97 485 -6055 249 220 0 0 chr10 91582979 91583029 -54006259 + Tigger1 DNA MER2_type 2 51 -2367 993 137 0 26 chr10 91583034 91583224 -54006064 - AluSp SINE Alu -11 302 118 186 176 0 0 chr10 91583236 91583287 -54006001 + (TCTCTG)n Simple_repeat Simple_repeat 2 52 0 282 232 23 17 chr10 91583517 91583698 -54005590 + T-rich Low_complexity Low_complexity 1 182 0 285 239 32 39 chr10 91583792 91583947 -54005341 + CT-rich Low_complexity Low_complexity 2 155 0 1821 146 38 0 chr10 91584790 91585077 -54004211 + AluSx SINE Alu 1 298 -14 301 310 6 29 chr10 91585312 91585486 -54003802 + C-rich Low_complexity Low_complexity 1 170 0 268 179 45 9 chr10 91585530 91585642 -54003646 + C-rich Low_complexity Low_complexity 3 118 0 1616 172 72 38 chr10 91586943 91587477 -54001811 + MLT2A2 LTR ERVL 5 554 0 1259 211 56 7 chr10 91588097 91588382 -54000906 + L1MB8 LINE L1 5871 6169 -9 317 150 0 192 chr10 91588383 91588503 -54000785 - MER96B DNA MER1_type? -317 100 4 201 380 62 0 chr10 91588534 91588663 -54000625 - L2 LINE L2 -559 2755 2619 272 304 89 45 chr10 91588905 91589166 -54000122 + L2 LINE L2 2720 2989 -283 4788 141 43 22 chr10 91589277 91589381 -53999907 + L1P3 LINE L1 309 409 -6052 330 0 19 39 chr10 91589381 91589433 -53999855 + (TTG)n Simple_repeat Simple_repeat 2 52 0 4788 141 43 22 chr10 91589433 91590285 -53999003 + L1P3 LINE L1 409 1285 -5176 6773 111 34 32 chr10 91592359 91593723 -53995565 + L1P LINE L1 4056 5423 -740 220 320 80 0 chr10 91595165 91595265 -53994023 - MIR3 SINE MIR -1 207 100 23 0 0 0 chr10 91595292 91595315 -53993973 + AT_rich Low_complexity Low_complexity 1 23 0 4778 136 52 34 chr10 91595853 91596851 -53992437 + Tigger3b DNA MER2_type 91 1106 -125 390 344 20 7 chr10 91597231 91597382 -53991906 + MER5B DNA MER1_type 23 175 -3 204 319 0 55 chr10 91597434 91597525 -53991763 - MER5A DNA MER1_type 0 189 104 * 248 282 177 33 chr10 91597446 91597578 -53991710 + MER5B DNA MER1_type 12 189 0 248 369 0 12 chr10 91597754 91597838 -53991450 + MIR SINE MIR 33 115 -93 219 302 42 36 chr10 91598324 91598475 -53990813 + MIR SINE MIR 16 164 -71 398 324 22 27 chr10 91599078 91599300 -53989988 - HAL1b LINE L1 -756 592 372 22 35 0 0 chr10 91600183 91600212 -53989076 + AT_rich Low_complexity Low_complexity 1 29 0 1445 197 19 44 chr10 91601025 91601340 -53987948 + AluJo SINE Alu 1 307 -5 609 261 0 42 chr10 91601599 91601764 -53987524 + MER58A DNA MER1_type 1 158 0 28 71 0 0 chr10 91602752 91602808 -53986480 + AT_rich Low_complexity Low_complexity 1 56 0 210 293 24 24 chr10 91602961 91603043 -53986245 - MIR3 SINE MIR -34 174 93 1329 114 170 3 chr10 91603418 91603724 -53985564 + L1P4 LINE L1 5254 5610 -564 290 255 12 56 chr10 91603927 91604088 -53985200 + CT-rich Low_complexity Low_complexity 3 156 0 1325 154 36 0 chr10 91604201 91604421 -53984867 - AluJb SINE Alu -82 230 3 233 115 0 58 chr10 91604757 91604809 -53984479 + (T)n Simple_repeat Simple_repeat 1 49 0 984 226 4 36 chr10 91605801 91606075 -53983213 - AluJo SINE Alu -34 278 14 208 280 172 0 chr10 91606419 91606512 -53982776 - MIR3 SINE MIR -33 175 67 2241 93 0 0 chr10 91607266 91607556 -53981732 + AluSq SINE Alu 19 308 -5 1666 151 3 55 chr10 91609124 91609415 -53979873 - AluSx SINE Alu -36 276 1 267 308 55 6 chr10 91611427 91611609 -53977679 + L1MC/D LINE L1 5701 5891 -1917 454 303 0 0 chr10 91611899 91611998 -53977290 + L2 LINE L2 3171 3269 -3 21 0 0 0 chr10 91612660 91612681 -53976607 + AT_rich Low_complexity Low_complexity 1 21 0 2213 68 4 4 chr10 91612982 91613312 -53975976 + AluY SINE Alu 1 330 0 358 378 50 37 chr10 91615233 91615474 -53973814 + L2 LINE L2 3028 3271 -1 253 312 118 0 chr10 91615748 91615841 -53973447 + MIR SINE MIR 57 160 -102 2726 16 0 13 chr10 91616090 91616403 -53972885 - AluYa5 SINE Alu -2 309 1 1767 227 49 13 chr10 91618300 91618850 -53970438 + L1MB2 LINE L1 2628 3197 -2949 459 0 0 0 chr10 91618890 91618941 -53970347 + (TA)n Simple_repeat Simple_repeat 2 52 0 2771 72 6 0 chr10 91618941 91619304 -53969984 - L1PA7 LINE L1 -19 6135 5771 297 270 0 0 chr10 91619306 91619406 -53969882 + T-rich Low_complexity Low_complexity 1 100 0 9347 95 1 1 chr10 91619409 91621505 -53967783 - L1PA7 LINE L1 -3 6151 4055 4576 218 47 6 chr10 91621505 91621821 -53967467 + L1MB2 LINE L1 3923 4224 -1922 234 62 0 0 chr10 91621821 91621853 -53967435 + (CA)n Simple_repeat Simple_repeat 1 32 0 4576 218 47 6 chr10 91621853 91622788 -53966500 + L1MB2 LINE L1 4224 5226 -920 2446 147 99 44 chr10 91622792 91623379 -53965909 + L1MB2 LINE L1 5295 5913 -255 397 151 23 0 chr10 91623383 91623469 -53965819 + L1MB2 LINE L1 6076 6163 -8 1480 212 0 41 chr10 91624403 91624719 -53964569 - AluJo SINE Alu -5 307 5 301 271 119 40 chr10 91624842 91624993 -53964295 - L1MEd LINE L1 -5016 1103 941 293 307 118 24 chr10 91625173 91625512 -53963776 - L1ME LINE L1 -280 5841 5471 316 341 68 34 chr10 91627144 91627469 -53961819 - HAL1b LINE L1 -938 410 75 4993 153 16 5 chr10 91627913 91628895 -53960393 + L1PA16 LINE L1 5171 6163 -3 2593 235 61 19 chr10 91628897 91630389 -53958899 - L1ME1 LINE L1 -47 6119 4565 291 253 53 0 chr10 91632471 91632546 -53956742 - MIR SINE MIR -133 129 51 320 309 27 41 chr10 91633453 91633716 -53955572 + L2 LINE L2 2915 3224 -89 882 219 50 12 chr10 91633820 91633914 -53955374 - L1MD2 LINE L1 -105 6648 6559 198 0 0 0 chr10 91633914 91633936 -53955352 + (TG)n Simple_repeat Simple_repeat 1 22 0 882 219 50 12 chr10 91633936 91634617 -53954671 - L1MD2 LINE L1 -194 6559 5744 * 1291 228 114 14 chr10 91634600 91635039 -53954249 - L1MD2 LINE L1 -4071 2469 1987 1181 217 44 4 chr10 91635052 91635301 -53953987 - L1MD2 LINE L1 -6127 416 158 426 261 110 32 chr10 91635408 91635626 -53953662 + MER102a DNA MER1_type 70 304 -26 389 272 86 19 chr10 91635743 91635905 -53953383 - MIR SINE MIR -73 189 17 2314 81 19 10 chr10 91636102 91636409 -53952879 - AluY SINE Alu -1 310 1 682 186 0 16 chr10 91636554 91636683 -53952605 + FRAM SINE Alu 20 146 -30 805 241 123 29 chr10 91637298 91637689 -53951599 + MLT1G LTR MaLR 10 495 -72 2442 169 2 1 chr10 91637702 91638223 -53951065 - LTR69 LTR ERVL -5 583 1 351 194 15 0 chr10 91638230 91638297 -53950991 + MLT1G LTR MaLR 488 555 0 323 360 0 9 chr10 91638642 91638756 -53950532 + L2 LINE L2 3180 3292 -21 1532 194 56 29 chr10 91639076 91639282 -53950006 - MLT1B LTR MaLR 0 390 170 396 40 0 0 chr10 91639282 91639332 -53949956 + (GA)n Simple_repeat Simple_repeat 1 50 0 1532 194 56 29 chr10 91639332 91639465 -53949823 - MLT1B LTR MaLR -220 170 42 2192 116 3 25 chr10 91639493 91639812 -53949476 - AluSq SINE Alu -1 312 1 553 258 74 45 chr10 91640734 91640978 -53948310 + MIR SINE MIR 12 262 0 315 71 0 0 chr10 91641135 91641177 -53948111 + (TG)n Simple_repeat Simple_repeat 1 42 0 916 252 56 85 chr10 91641801 91642214 -53947074 - MLT1J2 LTR MaLR -48 402 2 182 322 34 62 chr10 91642968 91643145 -53946143 - L2 LINE L2 -183 3089 2918 225 305 76 38 chr10 91644766 91644847 -53944441 - HAL1 LINE L1 -792 1715 1626 207 0 0 0 chr10 91644847 91644870 -53944418 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 225 305 76 38 chr10 91644870 91644919 -53944369 - HAL1 LINE L1 -881 1626 1580 2269 104 0 3 chr10 91645917 91646214 -53943074 + AluSx SINE Alu 1 296 -16 1533 176 68 42 chr10 91646285 91646638 -53942650 + MLT1A1 LTR MaLR 4 365 0 430 255 19 0 chr10 91646826 91646932 -53942356 - MER103 DNA DNA -55 111 4 1099 357 0 79 chr10 91647015 91647343 -53941945 + AluJb SINE Alu 1 302 0 4491 129 72 36 chr10 91648530 91649573 -53939715 + L1MA8 LINE L1 5046 6104 -187 718 205 8 0 chr10 91649574 91649701 -53939587 - FLAM_C SINE Alu -14 129 2 788 169 81 0 chr10 91649702 91649862 -53939426 + L1MA8 LINE L1 6097 6269 -22 468 307 185 20 chr10 91649882 91650191 -53939097 - LTR16A LTR ERVL -91 366 10 227 310 11 23 chr10 91650394 91650481 -53938807 + MIR SINE MIR 59 144 -118 1381 192 75 16 chr10 91651049 91651367 -53937921 - MER44D DNA MER2_type 0 609 3 479 329 66 64 chr10 91651455 91651998 -53937290 - L2 LINE L2 -2 3270 2731 514 261 172 43 chr10 91652675 91653047 -53936241 + MLT1H LTR MaLR 121 540 -9 249 207 0 0 chr10 91653288 91653346 -53935942 + (TA)n Simple_repeat Simple_repeat 2 59 0 409 245 15 98 chr10 91653396 91653600 -53935688 + HAL1 LINE L1 1486 1672 -835 806 274 68 19 chr10 91654621 91654884 -53934404 + Charlie8 DNA MER1_type 3 278 -2139 316 273 56 14 chr10 91655030 91655173 -53934115 - MIR3 SINE MIR -41 167 19 2295 163 84 7 chr10 91655367 91655797 -53933491 + L1MB3 LINE L1 5499 5961 -222 423 0 0 0 chr10 91655797 91655844 -53933444 + (TG)n Simple_repeat Simple_repeat 1 47 0 2274 98 0 52 chr10 91657852 91658177 -53931111 + AluSx SINE Alu 1 308 -4 670 200 0 15 chr10 91658260 91658395 -53930893 + FLAM_A SINE Alu 1 133 0 410 147 0 0 chr10 91658562 91658630 -53930658 + L1MA9 LINE L1 6242 6309 -3 21 71 0 0 chr10 91658726 91658768 -53930520 + AT_rich Low_complexity Low_complexity 1 42 0 323 246 36 73 chr10 91659071 91659181 -53930107 - MLT1F1 LTR MaLR -285 282 177 260 203 29 14 chr10 91659194 91659263 -53930025 - MLT1F1 LTR MaLR -466 76 7 213 348 142 0 chr10 91660169 91660310 -53928978 - L2 LINE L2 -10 3262 3102 380 287 75 16 chr10 91662458 91662646 -53926642 + MIR SINE MIR 50 248 -14 438 20 0 0 chr10 91662646 91662697 -53926591 + (ATG)n Simple_repeat Simple_repeat 2 52 0 250 309 234 0 chr10 91664339 91664519 -53924769 + MIR SINE MIR 30 248 -14 2823 97 25 2 chr10 91664727 91665176 -53924112 + L1MA2 LINE L1 5893 6350 0 1111 197 83 28 chr10 91667984 91668273 -53921015 + MLT1F1 LTR MaLR 259 563 -4 239 254 70 0 chr10 91669910 91669981 -53919307 + MIR SINE MIR 79 154 -108 2725 281 76 13 chr10 91670106 91670741 -53918547 - L1ME LINE L1 -1606 4474 3881 1923 133 0 18 chr10 91670741 91671027 -53918261 - AluSx SINE Alu -11 301 21 2725 281 76 13 chr10 91671027 91671643 -53917645 - L1ME LINE L1 -2199 3881 3144 23 0 0 0 chr10 91671730 91671753 -53917535 + AT_rich Low_complexity Low_complexity 1 23 0 1732 208 24 62 chr10 91671810 91672233 -53917055 - MLT2D LTR ERVL -7 407 1 2020 274 54 39 chr10 91672241 91674157 -53915131 - L1ME LINE L1 -3456 2624 608 645 260 13 70 chr10 91674157 91674384 -53914904 - MER58C DNA MER1_type -1 214 1 2020 274 54 39 chr10 91674384 91674967 -53914321 - L1ME LINE L1 -5472 608 35 553 155 0 0 chr10 91675466 91675550 -53913738 + AluJb SINE Alu 168 251 -61 244 234 0 0 chr10 91676121 91676185 -53913103 - L1ME LINE L1 -331 5790 5727 429 267 96 111 chr10 91676933 91677325 -53911963 + MLT1I LTR MaLR 21 405 -4 375 274 147 29 chr10 91677609 91677783 -53911505 + L1MC4a LINE L1 5689 5892 -1916 2218 120 0 0 chr10 91677783 91678118 -53911170 + AluSq SINE Alu 1 313 0 375 274 147 29 chr10 91678118 91678147 -53911141 + L1MC4a LINE L1 5892 5916 -1892 38 81 0 0 chr10 91678347 91678434 -53910854 + AT_rich Low_complexity Low_complexity 1 87 0 402 292 69 17 chr10 91678473 91678706 -53910582 - L1M4 LINE L1 -1655 4491 4247 1120 112 0 0 chr10 91678706 91678858 -53910430 + AluSp/q SINE Alu 158 309 -4 35 54 0 0 chr10 91679043 91679099 -53910189 + AT_rich Low_complexity Low_complexity 1 56 0 727 349 59 3 chr10 91680961 91681285 -53908003 + L1MEc LINE L1 40 381 -6015 1172 157 124 12 chr10 91682043 91682292 -53906996 + L1MB2 LINE L1 5893 6169 -2 352 296 0 0 chr10 91682337 91682452 -53906836 + HAL1b LINE L1 935 1049 -299 4328 198 17 12 chr10 91684755 91685738 -53903550 - L1MB1 LINE L1 0 6168 5174 636 149 9 0 chr10 91685739 91685846 -53903442 + L1MB1 LINE L1 5071 5178 -968 426 296 18 24 chr10 91687024 91687193 -53902095 + MIR SINE MIR 95 262 0 2519 128 35 28 chr10 91687202 91687631 -53901657 + MSTB1 LTR MaLR 1 432 0 431 349 0 0 chr10 91688138 91688284 -53901004 - MIR SINE MIR -109 153 8 494 319 64 24 chr10 91689519 91689770 -53899518 - MIR SINE MIR 0 262 2 258 56 0 0 chr10 91689990 91690026 -53899262 + (CA)n Simple_repeat Simple_repeat 1 36 0 302 232 81 30 chr10 91690936 91691035 -53898253 + MER5A DNA MER1_type 13 116 -73 211 222 19 0 chr10 91691051 91691105 -53898183 - MER5A DNA MER1_type -83 106 52 272 235 12 35 chr10 91691644 91691729 -53897559 - MIR SINE MIR -132 130 48 235 281 56 11 chr10 91691833 91691922 -53897366 + MER91A DNA MER1_type 16 108 -88 258 299 20 75 chr10 91692118 91692265 -53897023 + MIR SINE MIR 28 166 -96 235 158 0 0 chr10 91692993 91693031 -53896257 + MIR SINE MIR 109 146 -116 537 319 30 9 chr10 91695130 91695362 -53893926 + MIR SINE MIR 15 251 -11 342 0 0 0 chr10 91695728 91695766 -53893522 + (CA)n Simple_repeat Simple_repeat 1 38 0 737 240 40 0 chr10 91695822 91695997 -53893291 + MER5A DNA MER1_type 1 182 -7 1923 157 3 7 chr10 91696372 91696671 -53892617 - AluSx SINE Alu -14 298 1 1868 176 0 3 chr10 91696673 91696980 -53892308 - AluJo SINE Alu -6 306 1 948 216 41 30 chr10 91697527 91697795 -53891493 + MER33 DNA MER1_type 1 271 -53 289 231 44 11 chr10 91697822 91697913 -53891375 - MER5B DNA MER1_type -5 173 80 459 294 183 46 chr10 91698073 91698488 -53890800 - L2 LINE L2 -1 3312 2841 1825 174 57 14 chr10 91698535 91698885 -53890403 + MLT1A1 LTR MaLR 1 365 0 509 74 37 25 chr10 91699084 91699165 -53890123 + L1MC1 LINE L1 6252 6333 0 306 310 190 0 chr10 91699217 91699391 -53889897 + L2 LINE L2 2928 3134 -179 264 59 0 0 chr10 91699412 91699446 -53889842 + (TG)n Simple_repeat Simple_repeat 2 35 0 264 321 0 25 chr10 91699465 91699546 -53889742 + L2 LINE L2 3189 3267 -5 304 237 57 72 chr10 91699902 91700096 -53889192 + L1MC5 LINE L1 7723 7913 -48 297 285 78 51 chr10 91700127 91700383 -53888905 - L2 LINE L2 -1026 2288 2026 232 259 69 26 chr10 91700465 91700581 -53888707 + L3 LINE CR1 1249 1369 -208 548 261 12 101 chr10 91701022 91701149 -53888139 + MIR SINE MIR 29 123 -139 1552 143 10 101 chr10 91701149 91701456 -53887832 + AluJb SINE Alu 1 279 -33 548 261 12 101 chr10 91701456 91701585 -53887703 + MIR SINE MIR 123 262 0 371 43 0 0 chr10 91702600 91702647 -53886641 - THE1B LTR MaLR -25 339 293 2746 102 8 5 chr10 91703271 91703645 -53885643 - THE1C LTR MaLR 0 375 1 325 296 57 11 chr10 91703993 91704169 -53885119 + MIR SINE MIR 28 211 -51 333 374 16 0 chr10 91705163 91705350 -53883938 + MIR SINE MIR 67 256 -6 1308 98 0 0 chr10 91705370 91705534 -53883754 - AluSg/x SINE Alu -13 299 136 304 125 0 0 chr10 91705534 91705574 -53883714 + AluS SINE Alu 18 57 -246 279 271 221 20 chr10 91705912 91706111 -53883177 - L3 LINE CR1 -705 872 634 989 179 6 11 chr10 91706175 91706354 -53882934 + AluSg/x SINE Alu 135 312 0 398 283 98 23 chr10 91706419 91706592 -53882696 + MIR SINE MIR 18 203 -59 3511 73 0 0 chr10 91706617 91707057 -53882231 - MLT2A1 LTR ERVL -4 440 1 45723 68 7 2 chr10 91707058 91712687 -53876601 - HERVL-A1 LTR ERVL -1 5653 1 3220 114 22 27 chr10 91712687 91713197 -53876091 - MLT2A1 LTR ERVL 0 515 5 255 265 78 10 chr10 91713219 91713321 -53875967 - MIR SINE MIR -57 205 97 581 267 11 22 chr10 91714332 91714512 -53874776 + MER5B DNA MER1_type 1 178 0 874 189 126 5 chr10 91714522 91714713 -53874575 + MER20 DNA MER1_type 3 216 -3 211 103 244 0 chr10 91714726 91714780 -53874508 + MER5C DNA MER1_type 4 76 -113 1815 137 41 0 chr10 91714781 91715051 -53874237 + AluSx SINE Alu 1 281 -31 204 67 0 0 chr10 91715052 91715082 -53874206 + (TC)n Simple_repeat Simple_repeat 1 30 0 187 109 0 43 chr10 91715084 91715130 -53874158 + (TA)n Simple_repeat Simple_repeat 2 45 0 239 220 0 0 chr10 91715148 91715198 -53874090 + MER5A DNA MER1_type 60 109 -80 246 264 173 18 chr10 91715452 91715562 -53873726 + MIR SINE MIR 27 153 -109 268 297 22 11 chr10 91715611 91715702 -53873586 + MIR SINE MIR 49 140 -122 200 274 57 65 chr10 91716308 91716432 -53872856 + L2 LINE L2 3138 3260 -12 2293 110 0 0 chr10 91717653 91717944 -53871344 + AluSq SINE Alu 1 291 -22 195 42 0 0 chr10 91717944 91717968 -53871320 + (GA)n Simple_repeat Simple_repeat 2 25 0 180 97 0 0 chr10 91718395 91718426 -53870862 + (CA)n Simple_repeat Simple_repeat 1 31 0 238 366 46 0 chr10 91718640 91718771 -53870517 - MIR SINE MIR -54 208 72 186 184 26 0 chr10 91719526 91719564 -53869724 - MIR SINE MIR -163 99 61 768 249 26 56 chr10 91719881 91720150 -53869138 - MLT1J LTR MaLR -149 362 102 363 191 115 51 chr10 91720293 91720388 -53868900 - MIR SINE MIR -37 225 115 2572 152 44 0 chr10 91720388 91720796 -53868492 - MSTB LTR MaLR 0 426 1 363 191 115 51 chr10 91720796 91720857 -53868431 - MIR SINE MIR -147 115 59 240 35 0 0 chr10 91721251 91721280 -53868008 + (CA)n Simple_repeat Simple_repeat 1 29 0 319 282 86 0 chr10 91721818 91721935 -53867353 - L2 LINE L2 -9 3263 3137 1929 276 67 37 chr10 91722437 91723292 -53865996 + L1M3c LINE L1 10 939 -5202 1221 136 0 51 chr10 91723294 91723508 -53865780 + L1MA9 LINE L1 5672 5874 -438 383 286 165 1 chr10 91724369 91724566 -53864722 - MIR SINE MIR -1 261 36 939 179 10 53 chr10 91724783 91724990 -53864298 + MLT2B1 LTR ERVL 1 198 -322 998 88 18 12 chr10 91724990 91725160 -53864128 + (GAAA)n Simple_repeat Simple_repeat 2 172 0 217 220 55 22 chr10 91725166 91725257 -53864031 + (GAATG)n Simple_repeat Simple_repeat 3 96 0 445 91 13 13 chr10 91725280 91725357 -53863931 + (GGAA)n Simple_repeat Simple_repeat 1 77 0 861 181 207 36 chr10 91725357 91725596 -53863692 + MLT2B2 LTR ERVL 207 515 0 824 181 7 0 chr10 91726252 91726390 -53862898 + FAM SINE Alu 37 175 -10 2226 97 7 0 chr10 91726392 91726704 -53862584 + AluSx SINE Alu 1 314 0 812 233 23 23 chr10 91726714 91726933 -53862355 + AluJo SINE Alu 12 230 -82 1974 196 66 58 chr10 91727028 91727156 -53862132 + LTR53 LTR ERVL 1 127 -392 2279 108 3 3 chr10 91727156 91727461 -53861827 + AluSg SINE Alu 1 305 -5 1974 196 66 58 chr10 91727461 91727847 -53861441 + LTR53 LTR ERVL 127 519 0 234 222 0 0 chr10 91728333 91728378 -53860910 + MIR SINE MIR 129 173 -89 357 197 28 0 chr10 91729941 91730012 -53859276 + LTR16C LTR ERVL 419 491 0 856 171 86 6 chr10 91730253 91730428 -53858860 + MER5A DNA MER1_type 1 189 0 317 237 43 14 chr10 91730573 91730712 -53858576 + (TA)n Simple_repeat Simple_repeat 1 143 0 2213 94 0 3 chr10 91730801 91731087 -53858201 - AluSq SINE Alu -28 285 1 195 244 22 0 chr10 91732166 91732211 -53857077 + L3 LINE CR1 1520 1565 -12 789 189 0 26 chr10 91733389 91733542 -53855746 + AluJb SINE Alu 164 312 0 261 0 0 0 chr10 91733572 91733601 -53855687 + (TAGA)n Simple_repeat Simple_repeat 2 30 0 664 294 80 13 chr10 91733620 91733864 -53855424 + MIR SINE MIR 19 258 -4 348 237 83 45 chr10 91733873 91734029 -53855259 + L1ME4a LINE L1 5957 6118 -3 22 0 0 0 chr10 91734148 91734170 -53855118 + GC_rich Low_complexity Low_complexity 1 22 0 553 300 148 28 chr10 91734705 91735105 -53854183 + L1ME4a LINE L1 5346 5795 -326 180 176 0 0 chr10 91735234 91735268 -53854020 + (TATATG)n Simple_repeat Simple_repeat 5 38 0 260 156 42 135 chr10 91735268 91735364 -53853924 + L1ME4a LINE L1 5935 6021 -100 2935 207 43 21 chr10 91735943 91736676 -53852612 + L1ME1 LINE L1 5427 6332 -2 1481 163 7 33 chr10 91737204 91737480 -53851808 - ERVL LTR ERVL -2051 3713 3445 1878 300 44 46 chr10 91737490 91738244 -53851044 + HERV16 LTR ERVL 2342 3093 -1903 21 0 0 0 chr10 91738557 91738578 -53850710 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr10 91738913 91738933 -53850355 + (T)n Simple_repeat Simple_repeat 1 20 0 1531 219 99 20 chr10 91739028 91739421 -53849867 + MLT1C LTR MaLR 1 424 -43 257 243 23 90 chr10 91739482 91739628 -53849660 + FLAM_A SINE Alu 5 126 -7 774 263 45 24 chr10 91740031 91740278 -53849010 - MLT1I LTR MaLR -140 269 18 298 309 146 18 chr10 91740365 91740530 -53848758 + L3 LINE CR1 1390 1575 -2 271 235 25 25 chr10 91741354 91741435 -53847853 + MLT1E-int LTR MaLR 1654 1734 -1 967 240 86 50 chr10 91741436 91741773 -53847515 + MLT1E LTR MaLR 1 349 -244 865 297 74 31 chr10 91742063 91742793 -53846495 + L1MEc LINE L1 1913 2631 -3584 1483 278 85 34 chr10 91743051 91743072 -53846216 - L2 LINE L2 -1192 2122 2104 2124 66 17 24 chr10 91743072 91743361 -53845927 + AluY SINE Alu 1 287 -24 1483 278 85 34 chr10 91743361 91743641 -53845647 - L2 LINE L2 -1210 2104 1840 2608 143 83 2 chr10 91743641 91744073 -53845215 - MLT1C LTR MaLR 0 467 1 1483 278 85 34 chr10 91744073 91744442 -53844846 - L2 LINE L2 -1474 1840 1417 1624 198 117 11 chr10 91745066 91745424 -53843864 + MSTD LTR MaLR 1 396 0 1529 155 79 14 chr10 91745613 91745891 -53843397 + MSTA LTR MaLR 133 428 0 2081 168 14 48 chr10 91745895 91746336 -53842952 + L1MD3 LINE L1 7570 7995 0 1950 220 0 3 chr10 91746483 91746847 -53842441 - MLT1A1 LTR MaLR 0 365 3 234 174 0 0 chr10 91746871 91746917 -53842371 + (CA)n Simple_repeat Simple_repeat 2 47 0 655 136 18 0 chr10 91746960 91747070 -53842218 + L1MA5 LINE L1 6187 6298 -2 2009 130 33 7 chr10 91747104 91747404 -53841884 + AluSx SINE Alu 1 308 -4 185 185 0 0 chr10 91747453 91747480 -53841808 - MIR SINE MIR -146 62 36 235 268 21 10 chr10 91749042 91749139 -53840149 + L1ME4a LINE L1 5962 6059 -62 26 30 0 0 chr10 91749424 91749457 -53839831 + AT_rich Low_complexity Low_complexity 1 33 0 457 186 93 0 chr10 91749656 91749753 -53839535 + LTR49-int LTR ERV1 2963 3068 -3263 570 115 13 0 chr10 91749753 91749831 -53839457 + AluS SINE Alu 1 79 -234 2074 170 28 25 chr10 91749833 91750341 -53838947 - MLT2A2 LTR ERVL -44 510 1 952 254 47 65 chr10 91750353 91750888 -53838400 - LTR49-int LTR ERV1 -4227 2104 1519 2526 71 0 3 chr10 91750980 91751290 -53837998 + AluY SINE Alu 1 309 -2 1007 220 47 8 chr10 91751894 91752130 -53837158 - PABL_B LTR ERV1 -1 666 422 1925 189 74 38 chr10 91752139 91752610 -53836678 + LTR2B LTR ERV1 3 490 0 11623 175 12 4 chr10 91752610 91754534 -53834754 + HERVE LTR ERV1 1 1940 -5873 22 0 0 0 chr10 91754716 91754738 -53834550 + AT_rich Low_complexity Low_complexity 1 22 0 2610 99 13 61 chr10 91754811 91755030 -53834258 - THE1C LTR MaLR 0 375 147 1875 102 8 0 chr10 91755030 91755284 -53834004 + AluSg SINE Alu 55 310 0 2610 99 13 61 chr10 91755284 91755295 -53833993 - THE1C LTR MaLR -228 147 137 2165 102 7 0 chr10 91755295 91755590 -53833698 + AluSp SINE Alu 1 297 -16 2610 99 13 61 chr10 91755590 91755752 -53833536 - THE1C LTR MaLR -238 137 1 37 39 0 0 chr10 91757201 91757252 -53832036 + AT_rich Low_complexity Low_complexity 1 51 0 718 231 100 0 chr10 91757296 91757456 -53831832 - MER45A DNA AcHobo -1 177 2 189 0 0 0 chr10 91757581 91757602 -53831686 + (TG)n Simple_repeat Simple_repeat 2 22 0 2363 105 0 3 chr10 91757641 91757954 -53831334 + AluSq SINE Alu 1 312 -1 210 263 51 68 chr10 91759163 91759281 -53830007 - L2 LINE L2 -193 3079 2964 465 289 21 37 chr10 91759376 91759566 -53829722 - MIR SINE MIR -3 259 73 2054 124 10 13 chr10 91759896 91760210 -53829078 + AluSq SINE Alu 1 313 0 332 206 43 22 chr10 91760650 91760742 -53828546 - HAL1 LINE L1 -343 2164 2071 252 299 32 64 chr10 91760991 91761178 -53828110 - HAL1 LINE L1 -706 1801 1621 575 266 74 26 chr10 91761185 91761414 -53827874 - LTR33A LTR ERVL -20 503 264 406 162 141 50 chr10 91761625 91761724 -53827564 - MER21A LTR ERV1 -20 911 804 542 263 116 50 chr10 91761724 91762198 -53827090 - MER34B LTR ERV1 0 565 5 10692 183 47 46 chr10 91762204 91764503 -53824785 - MER34B-int LTR ERV1 -3 6328 4024 2492 52 0 10 chr10 91764503 91764809 -53824479 + AluY SINE Alu 1 303 -8 10692 183 47 46 chr10 91764809 91765065 -53824223 - MER34B-int LTR ERV1 -2307 4024 3770 1792 167 13 13 chr10 91765066 91765242 -53824046 - AluJb SINE Alu 0 312 137 210 37 0 0 chr10 91765242 91765269 -53824019 + (TTG)n Simple_repeat Simple_repeat 2 28 0 2140 99 0 3 chr10 91765269 91765553 -53823735 - AluY SINE Alu -28 283 1 1792 167 13 13 chr10 91765553 91765687 -53823601 - AluJb SINE Alu -173 139 1 911 286 95 28 chr10 91766313 91766712 -53822576 - L2 LINE L2 -637 2677 2252 212 333 0 0 chr10 91766905 91766959 -53822329 - L2 LINE L2 0 3272 3219 181 321 37 12 chr10 91767176 91767257 -53822031 - MIR SINE MIR -105 103 21 524 282 148 15 chr10 91767562 91767764 -53821524 - MIR SINE MIR -31 231 3 1822 164 0 41 chr10 91768643 91768961 -53820327 - AluJo SINE Alu -7 305 1 1715 161 46 0 chr10 91769309 91769594 -53819694 + AluJo SINE Alu 1 298 -14 757 260 98 10 chr10 91769913 91770117 -53819171 + MLT1H1 LTR MaLR 2 223 -332 1330 132 105 5 chr10 91770119 91770338 -53818950 + AluSx SINE Alu 55 295 -17 1124 277 13 16 chr10 91770338 91770656 -53818632 + MLT1H1 LTR MaLR 221 537 -18 1150 180 141 14 chr10 91770657 91770941 -53818347 - MLT1D LTR MaLR -185 320 1 799 134 118 0 chr10 91771217 91771344 -53817944 + U1 snRNA snRNA 1 142 -23 859 206 71 5 chr10 91772073 91772257 -53817031 - MER58A DNA MER1_type -23 201 6 293 308 150 15 chr10 91772698 91772831 -53816457 - L2 LINE L2 -7 3265 3115 471 363 0 20 chr10 91772928 91773129 -53816159 + LTR67 LTR ERVL 65 261 -296 365 295 33 0 chr10 91773236 91773358 -53815930 + LTR67 LTR ERVL 432 557 0 539 348 60 29 chr10 91773440 91773860 -53815428 - L2 LINE L2 -341 2973 2541 291 270 103 8 chr10 91774692 91774818 -53814470 - LTR16A LTR ERVL -13 437 300 269 271 42 10 chr10 91774904 91775000 -53814288 - LTR16A1 LTR ERVL -301 156 58 1201 56 0 0 chr10 91775194 91775337 -53813951 - L1PA8 LINE L1 0 6172 6030 231 286 103 0 chr10 91775355 91775481 -53813807 + MIR SINE MIR 111 249 -13 235 272 10 29 chr10 91775547 91775650 -53813638 - L1MC/D LINE L1 -1993 5815 5715 1853 175 0 7 chr10 91776021 91776318 -53812970 + AluJb SINE Alu 1 295 -17 214 298 95 0 chr10 91776744 91776828 -53812460 + MIR SINE MIR 163 254 -8 2947 84 3 11 chr10 91777862 91778229 -53811059 - THE1B LTR MaLR 0 364 1 352 231 131 34 chr10 91779345 91779514 -53809774 - MLT1H LTR MaLR -27 522 331 284 0 0 27 chr10 91779950 91779987 -53809301 + (CA)n Simple_repeat Simple_repeat 2 37 0 508 211 149 11 chr10 91781353 91781528 -53807760 + MIR SINE MIR 1 199 -63 912 92 54 0 chr10 91781790 91781920 -53807368 - AluSc SINE Alu -2 307 171 1242 104 6 6 chr10 91782006 91782169 -53807119 - AluSc SINE Alu -146 163 1 705 297 45 0 chr10 91782495 91782717 -53806571 - MIR SINE MIR -3 259 28 387 0 0 0 chr10 91782752 91782795 -53806493 + (TG)n Simple_repeat Simple_repeat 2 44 0 299 241 61 36 chr10 91783968 91784106 -53805182 - MIR SINE MIR -50 212 73 227 333 0 0 chr10 91784105 91784171 -53805117 - L2 LINE L2 -1 3312 3247 * 721 292 82 48 chr10 91784947 91784972 -53804316 + L1ME LINE L1 43 66 -6004 675 228 8 0 chr10 91784972 91785099 -53804189 + FLAM_A SINE Alu 1 128 -5 721 292 82 48 chr10 91785099 91785511 -53803777 + L1ME LINE L1 66 495 -5575 * 743 245 68 110 chr10 91785509 91786212 -53803076 + L1ME LINE L1 749 1332 -4748 2184 145 0 0 chr10 91786212 91786522 -53802766 + AluSx SINE Alu 1 310 -2 743 245 68 110 chr10 91786522 91786731 -53802557 + L1ME LINE L1 1332 1548 -4532 323 235 0 35 chr10 91786898 91786921 -53802367 - LTR50 LTR ERVL -2 793 771 1914 150 17 0 chr10 91786921 91787214 -53802074 + AluSx SINE Alu 1 298 -14 323 235 0 35 chr10 91787214 91787275 -53802013 - LTR50 LTR ERVL -24 771 712 879 186 70 6 chr10 91787333 91787505 -53801783 + MER46B DNA MER2_type 1 58 -178 27130 121 12 72 chr10 91787515 91791584 -53797704 + L1P LINE L1 12 3731 -2415 2828 13 0 0 chr10 91791584 91791885 -53797403 + AluY SINE Alu 1 301 -10 27130 121 12 72 chr10 91791885 91792784 -53796504 + L1P LINE L1 3731 4682 -1464 594 309 48 24 chr10 91793398 91793734 -53795554 - L1ME4a LINE L1 -175 5946 5603 482 0 17 0 chr10 91793738 91793796 -53795492 + (TCTA)n Simple_repeat Simple_repeat 2 60 0 2575 182 24 44 chr10 91793835 91793956 -53795332 + MER41B LTR ERV1 88 210 -276 2152 119 0 3 chr10 91793956 91794250 -53795038 + AluSx SINE Alu 16 308 -4 2575 182 24 44 chr10 91794250 91794566 -53794722 + MER41B LTR ERV1 210 348 -138 2308 100 0 0 chr10 91794566 91794867 -53794421 - AluSg SINE Alu -9 301 1 2575 182 24 44 chr10 91794867 91794999 -53794289 + MER41B LTR ERV1 348 481 -5 1700 96 0 0 chr10 91795213 91795431 -53793857 - AluSc SINE Alu -20 289 72 696 239 43 62 chr10 91795616 91795862 -53793426 - MIR SINE MIR -3 259 15 24 0 0 0 chr10 91796107 91796131 -53793157 + AT_rich Low_complexity Low_complexity 1 24 0 1527 178 43 21 chr10 91796131 91796412 -53792876 - AluJo SINE Alu -25 287 1 1609 294 44 26 chr10 91796879 91797453 -53791835 + L1MCb LINE L1 3 586 -5459 3194 188 49 45 chr10 91797494 91798606 -53790682 + L1MCb LINE L1 553 1675 -4889 2354 110 0 0 chr10 91798606 91798914 -53790374 - AluSg SINE Alu -2 308 1 3194 188 49 45 chr10 91798914 91799009 -53790279 + L1MCb LINE L1 1675 1768 -4796 2269 106 0 3 chr10 91799928 91800231 -53789057 - AluSx SINE Alu -10 302 1 1731 217 134 14 chr10 91800498 91801079 -53788209 + L1MCb LINE L1 1846 2496 -4068 642 209 0 0 chr10 91801088 91801198 -53788090 + FLAM_A SINE Alu 4 113 -29 629 251 30 43 chr10 91801218 91801453 -53787835 + L1MCb LINE L1 2528 2712 -3852 1112 162 22 0 chr10 91801642 91801827 -53787461 + MER5A DNA MER1_type 1 189 0 312 279 19 0 chr10 91801999 91802103 -53787185 + MER5A DNA MER1_type 4 109 -80 24 53 0 0 chr10 91802425 91802463 -53786825 + AT_rich Low_complexity Low_complexity 1 38 0 1708 165 29 4 chr10 91802463 91802736 -53786552 - AluJo SINE Alu -27 285 6 369 316 36 75 chr10 91804036 91804212 -53785076 + LTR16C LTR ERVL 96 252 -239 1374 184 67 21 chr10 91804212 91804494 -53784794 - AluJb SINE Alu -17 295 1 369 316 36 75 chr10 91804494 91804675 -53784613 + LTR16C LTR ERVL 252 439 -52 2367 167 63 23 chr10 91804695 91805138 -53784150 + LTR32 LTR ERVL 11 471 0 226 242 182 0 chr10 91805257 91805356 -53783932 - L2 LINE L2 0 3313 3197 327 221 315 0 chr10 91805643 91805770 -53783518 - MER5B DNA MER1_type -7 171 5 1707 128 113 0 chr10 91807352 91807617 -53781671 + AluSx SINE Alu 1 295 -17 336 280 69 37 chr10 91807696 91807885 -53781403 + MER117 DNA MER1_type 3 197 0 6112 133 41 32 chr10 91807922 91809000 -53780288 - L1MA4A LINE L1 -2 6301 5209 12817 27 26 0 chr10 91809000 91811223 -53778065 + L1PA3 LINE L1 3909 6154 -1 6112 133 41 32 chr10 91811223 91811882 -53777406 - L1MA4A LINE L1 -1094 5209 4558 216 0 0 0 chr10 91811890 91811914 -53777374 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2259 109 0 3 chr10 91811924 91812236 -53777052 - AluY SINE Alu 0 311 1 1879 171 0 28 chr10 91812582 91812903 -53776385 - AluSx SINE Alu 0 312 1 250 218 69 89 chr10 91812931 91812987 -53776301 - L1MC5 LINE L1 -45 7916 7860 2125 187 21 12 chr10 91812987 91813409 -53775879 - MSTB LTR MaLR 0 426 1 250 218 69 89 chr10 91813409 91813554 -53775734 - L1MC5 LINE L1 -101 7860 7719 538 175 95 56 chr10 91813571 91813697 -53775591 - AluJb SINE Alu -179 133 3 1857 147 6 29 chr10 91815017 91815330 -53773958 - AluSx SINE Alu -6 306 1 583 303 2 28 chr10 91815967 91816178 -53773110 + MIR SINE MIR 19 224 -38 2364 103 26 63 chr10 91816481 91816812 -53772476 + THE1B LTR MaLR 1 318 -46 2197 112 0 10 chr10 91816812 91817107 -53772181 - AluSq SINE Alu -21 292 1 2364 103 26 63 chr10 91817107 91817153 -53772135 + THE1B LTR MaLR 318 364 0 1513 201 25 22 chr10 91817891 91818169 -53771119 - AluJb SINE Alu -33 279 1 199 204 61 92 chr10 91818397 91818495 -53770793 - MIR3 SINE MIR -48 160 66 235 259 52 0 chr10 91818937 91818995 -53770293 - MER113 DNA MER1_type? -3 518 458 372 228 0 63 chr10 91819109 91819236 -53770052 - MER113 DNA MER1_type? -401 120 2 230 250 15 44 chr10 91820134 91820202 -53769086 - L2 LINE L2 -62 3210 3145 730 191 0 0 chr10 91820249 91820364 -53768924 + FLAM_A SINE Alu 1 115 -18 313 260 55 27 chr10 91820412 91820558 -53768730 - L1ME LINE L1 -398 5723 5574 378 139 59 16 chr10 91820694 91820796 -53768492 - LTR50 LTR ERVL -1 780 687 1591 223 94 49 chr10 91820796 91821023 -53768265 + MER74B LTR ERVL 59 274 -348 2314 102 13 3 chr10 91821023 91821328 -53767960 + AluSq SINE Alu 1 308 -5 1591 223 94 49 chr10 91821328 91821634 -53767654 + MER74B LTR ERVL 274 616 -6 368 312 96 74 chr10 91821642 91821966 -53767322 - LTR41 LTR ERVL -82 691 361 502 224 119 0 chr10 91822060 91822203 -53767085 - LTR41 LTR ERVL -594 179 20 267 323 32 48 chr10 91822203 91822308 -53766980 - LTR16C LTR ERVL -266 225 121 4751 82 35 0 chr10 91822308 91822945 -53766343 - PABL_A LTR ERV1 -1 659 1 267 323 32 48 chr10 91822945 91822963 -53766325 - LTR16C LTR ERVL -370 121 104 477 208 131 30 chr10 91823024 91823192 -53766096 + L2 LINE L2 3129 3313 0 218 333 158 0 chr10 91824514 91824634 -53764654 + MIR SINE MIR 117 255 -7 1235 287 84 23 chr10 91824932 91825361 -53763927 - MLT1J LTR MaLR -1 510 56 377 232 87 40 chr10 91825552 91825700 -53763588 - MIR SINE MIR -64 144 1 850 259 178 24 chr10 91826763 91827218 -53762070 - MLT1H1 LTR MaLR 0 555 31 401 277 0 22 chr10 91827755 91827892 -53761396 + (TG)n Simple_repeat Simple_repeat 1 134 0 445 231 58 0 chr10 91828626 91828730 -53760558 - FLAM_A SINE Alu -21 121 12 22 70 0 0 chr10 91828887 91828930 -53760358 + AT_rich Low_complexity Low_complexity 1 43 0 267 327 27 27 chr10 91828959 91829109 -53760179 - MIR SINE MIR -111 151 2 191 289 0 0 chr10 91829497 91829549 -53759739 - MIR SINE MIR -106 156 105 391 287 113 28 chr10 91829728 91830010 -53759278 + L1M4 LINE L1 2857 3162 -2984 215 214 0 0 chr10 91830049 91830091 -53759197 + (TG)n Simple_repeat Simple_repeat 2 43 0 3424 164 15 70 chr10 91830247 91830966 -53758322 - LTR8 LTR ERV1 -9 682 3 388 310 86 54 chr10 91831073 91831337 -53757951 + L1M4 LINE L1 3522 3776 -2370 2238 128 0 0 chr10 91831337 91831642 -53757646 - AluSx SINE Alu -7 305 1 388 310 86 54 chr10 91831642 91831934 -53757354 + L1M4 LINE L1 3776 4112 -2034 558 279 108 28 chr10 91831965 91832252 -53757036 + L2 LINE L2 2238 2547 -767 209 157 20 39 chr10 91832669 91832720 -53756568 + CT-rich Low_complexity Low_complexity 5 54 0 2269 111 0 0 chr10 91832840 91833138 -53756150 - AluSg SINE Alu -12 298 1 481 204 246 7 chr10 91833769 91833911 -53755377 + MER5A DNA MER1_type 14 189 0 245 390 48 0 chr10 91833919 91834065 -53755223 - L2 LINE L2 -573 2741 2589 232 293 19 47 chr10 91834151 91834257 -53755031 + MIR SINE MIR 148 250 -12 206 234 0 0 chr10 91834429 91834476 -53754812 + (CAATT)n Simple_repeat Simple_repeat 5 51 0 408 279 57 36 chr10 91834526 91834666 -53754622 - MIR SINE MIR -73 189 47 377 223 146 0 chr10 91834830 91834933 -53754355 + L2 LINE L2 3194 3311 -2 984 231 95 97 chr10 91835209 91835747 -53753541 + MER34 LTR ERV1 2 538 -4 514 207 122 58 chr10 91836800 91837047 -53752241 - LTR41 LTR ERVL 0 795 513 296 195 219 71 chr10 91837355 91837524 -53751764 - LTR41 LTR ERVL -579 194 1 297 127 16 63 chr10 91837883 91837946 -53751342 + Charlie5 DNA MER1_type 2234 2293 -319 279 257 27 0 chr10 91837932 91838006 -53751282 - MLT1J2 LTR MaLR -255 195 120 * 399 230 119 50 chr10 91838008 91838272 -53751016 - MER34 LTR ERV1 0 785 392 581 244 189 5 chr10 91838816 91839033 -53750255 + MLT1K LTR MaLR 327 583 -5 2280 147 3 28 chr10 91839421 91839775 -53749513 + MER7A DNA MER2_type 1 343 -3 286 246 29 0 chr10 91840165 91840234 -53749054 - MER94 DNA DNA -62 72 2 21 0 0 0 chr10 91840298 91840319 -53748969 + AT_rich Low_complexity Low_complexity 1 21 0 1195 68 32 42 chr10 91840517 91840707 -53748581 - L1MA5A LINE L1 -331 5966 5779 25 31 0 0 chr10 91840719 91840751 -53748537 + AT_rich Low_complexity Low_complexity 1 32 0 521 216 0 0 chr10 91840756 91840844 -53748444 - AluJ/FLAM SINE Alu -221 91 4 220 258 0 67 chr10 91842193 91842282 -53747006 + L2 LINE L2 2968 3050 -222 724 311 40 57 chr10 91842392 91842917 -53746371 + L1MEd LINE L1 35 550 -5569 21 36 0 0 chr10 91843023 91843051 -53746237 + AT_rich Low_complexity Low_complexity 1 28 0 508 304 43 6 chr10 91843139 91843345 -53745943 + L1M4 LINE L1 3547 3764 -2382 751 214 8 0 chr10 91843503 91843634 -53745654 - FLAM_A SINE Alu -1 132 1 1015 118 18 0 chr10 91846066 91846236 -53743052 + CT-rich Low_complexity Low_complexity 2 174 0 2056 115 4 4 chr10 91846236 91846514 -53742774 - AluSq SINE Alu -35 278 1 23 33 0 0 chr10 91847219 91847249 -53742039 + AT_rich Low_complexity Low_complexity 1 30 0 201 39 0 0 chr10 91847312 91847338 -53741950 + (TA)n Simple_repeat Simple_repeat 1 26 0 1416 269 137 8 chr10 91847732 91848245 -53741043 + L2 LINE L2 2196 2774 -540 1936 130 0 94 chr10 91848546 91848876 -53740412 - AluSx SINE Alu -2 300 2 32 0 0 0 chr10 91849044 91849076 -53740212 + AT_rich Low_complexity Low_complexity 1 32 0 871 126 26 13 chr10 91849082 91849233 -53740055 + MER4D LTR ERV1 179 331 -572 837 115 0 0 chr10 91849233 91849403 -53739885 - AluSg/x SINE Alu 0 339 170 597 93 0 0 chr10 91849404 91849479 -53739809 + AluS SINE Alu 11 85 -228 2897 197 32 9 chr10 91849479 91850042 -53739246 + MER4D LTR ERV1 328 903 0 22 0 0 0 chr10 91850074 91850096 -53739192 + AT_rich Low_complexity Low_complexity 1 22 0 829 199 48 0 chr10 91850602 91850768 -53738520 - MLT1E1 LTR MaLR 0 654 481 486 290 78 57 chr10 91851240 91851891 -53737397 + L1MEd LINE L1 591 1255 -4864 428 307 83 86 chr10 91853118 91853502 -53735786 - L2 LINE L2 0 3272 2890 717 145 17 26 chr10 91853521 91853638 -53735650 - FLAM_A SINE Alu -10 132 17 789 264 86 11 chr10 91853784 91854115 -53735173 - L2 LINE L2 -2014 1300 884 * 1046 279 73 41 chr10 91854111 91854683 -53734605 + L2 LINE L2 2714 3312 -1 * 1678 298 121 19 chr10 91854672 91855460 -53733828 - L2 LINE L2 -2414 900 33 1025 157 6 0 chr10 91855590 91855749 -53733539 - MLT1B LTR MaLR 0 390 231 547 127 173 0 chr10 91855765 91855875 -53733413 - MLT1B LTR MaLR -261 129 1 239 230 129 1 chr10 91855932 91856021 -53733267 - MIR SINE MIR -58 150 58 188 200 40 80 chr10 91856044 91856094 -53733194 + L2 LINE L2 3246 3293 -20 584 241 9 0 chr10 91856439 91856551 -53732737 - FLAM_A SINE Alu -29 113 1 1325 222 3 38 chr10 91857497 91857817 -53731471 - L1ME1 LINE L1 -7 6159 5851 307 227 273 87 chr10 91857952 91858102 -53731186 + LTR41 LTR ERVL 4 181 -592 873 158 140 0 chr10 91858489 91858653 -53730635 - Tigger4(Zombi) DNA MER2_type 0 2731 2545 7751 49 0 2 chr10 91858657 91859822 -53729466 - L1PA7 LINE L1 0 6154 4991 491 134 0 0 chr10 91959879 91959961 -53629327 + L1PB3 LINE L1 6070 6151 -3 22 0 0 0 chr10 91959975 91959997 -53629291 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr10 91960053 91960074 -53629214 + AT_rich Low_complexity Low_complexity 1 21 0 408 239 29 14 chr10 91961368 91961506 -53627782 + L1MD3 LINE L1 5694 5833 -1975 1061 113 0 0 chr10 91961506 91961647 -53627641 + AluJb SINE Alu 1 141 -171 33 0 0 0 chr10 91961692 91961725 -53627563 + AT_rich Low_complexity Low_complexity 1 33 0 734 193 40 147 chr10 91961775 91962125 -53627163 + L1MD3 LINE L1 6172 6284 -1524 315 0 0 0 chr10 91962125 91962160 -53627128 + (CA)n Simple_repeat Simple_repeat 2 36 0 734 193 40 147 chr10 91962160 91962450 -53626838 + L1MD3 LINE L1 6284 6603 -1205 2374 100 0 0 chr10 91963634 91963943 -53625345 - AluY SINE Alu -2 309 1 378 196 123 0 chr10 91964111 91964249 -53625039 + L1 LINE L1 3126 3280 -2866 234 0 0 0 chr10 91965292 91965318 -53623970 + (T)n Simple_repeat Simple_repeat 1 26 0 790 134 0 0 chr10 91966108 91966227 -53623061 + LTR12 LTR ERV1 348 466 -248 1736 197 0 16 chr10 91967435 91967750 -53621538 - AluJo SINE Alu -2 310 1 2246 96 0 0 chr10 91968267 91968559 -53620729 + AluSx SINE Alu 3 294 -18 660 225 102 54 chr10 91969336 91969669 -53619619 - HAL1 LINE L1 -1319 1188 840 263 206 138 0 chr10 91969847 91969981 -53619307 + AluYa8 SINE Alu 1 130 -170 289 248 55 64 chr10 91970152 91970370 -53618918 + L1MC4 LINE L1 7825 8040 -2 242 284 11 21 chr10 91970373 91970468 -53618820 - L3b LINE CR1 -331 1252 1159 5451 55 18 20 chr10 91970602 91971346 -53617942 + SVA Other Other 1 742 -644 192 272 87 43 chr10 91972118 91972210 -53617078 + MIR3 SINE MIR 2 97 -111 1834 125 18 4 chr10 91972325 91972597 -53616691 + AluSg SINE Alu 21 296 -14 357 307 19 23 chr10 91972836 91973093 -53616195 + L1ME3A LINE L1 4957 5212 -934 1270 248 101 20 chr10 91973178 91973821 -53615467 + L1ME3A LINE L1 5262 5979 -187 1103 191 131 20 chr10 91973957 91974255 -53615033 - L2 LINE L2 -1294 2020 1690 1398 84 90 17 chr10 91974289 91974610 -53614678 - MER4C LTR ERV1 0 465 88 2040 101 25 35 chr10 91974611 91974927 -53614361 + AluSq SINE Alu 1 313 0 377 218 0 11 chr10 91974963 91975050 -53614238 - MER4C LTR ERV1 -364 101 16 1164 250 142 72 chr10 91975562 91975744 -53613544 + L1M4 LINE L1 3574 3742 -2404 606 205 8 17 chr10 91975744 91975861 -53613427 + FLAM_A SINE Alu 1 116 -17 1164 250 142 72 chr10 91975861 91975881 -53613407 + L1M4 LINE L1 3742 3759 -2387 2448 76 0 0 chr10 91975881 91976182 -53613106 + AluSx SINE Alu 1 301 -11 1164 250 142 72 chr10 91976182 91977123 -53612165 + L1M4 LINE L1 3759 4796 -1350 1928 138 40 0 chr10 91977578 91977875 -53611413 - AluSx SINE Alu -3 309 1 219 258 97 75 chr10 91977942 91978035 -53611253 + L2 LINE L2 2397 2491 -823 335 350 17 16 chr10 91979235 91979423 -53609865 - MLT1I LTR MaLR -194 215 27 2026 150 63 12 chr10 91980800 91981424 -53607864 + MER39 LTR ERV1 1 707 0 2321 120 33 8 chr10 91981429 91981795 -53607493 + THE1C LTR MaLR 1 375 0 1228 152 5 10 chr10 91982293 91982491 -53606797 + AluJb SINE Alu 98 294 -18 322 273 107 16 chr10 91982542 91982784 -53606504 + HAL1b LINE L1 126 389 -959 333 304 149 23 chr10 91982880 91983094 -53606194 + L2 LINE L2 2509 2749 -565 183 333 17 17 chr10 91983382 91983442 -53605846 + L2 LINE L2 3127 3186 -86 228 264 0 0 chr10 91983577 91983630 -53605658 + MER117 DNA MER1_type 36 88 -109 842 167 0 0 chr10 91983630 91983756 -53605532 + FLAM_C SINE Alu 1 126 -17 1145 163 70 54 chr10 91984273 91984717 -53604571 - L1M4 LINE L1 -676 5498 5049 848 169 0 21 chr10 91984717 91984859 -53604429 - FLAM_C SINE Alu -4 139 1 374 212 35 9 chr10 91984859 91984972 -53604316 - L1M4 LINE L1 -1091 5055 4940 2029 111 4 4 chr10 91985045 91985324 -53603964 + AluSq SINE Alu 21 299 -14 434 186 0 0 chr10 91985334 91985404 -53603884 + AluJ/FLAM SINE Alu 1 70 -242 2078 253 42 9 chr10 91985404 91986166 -53603122 + L1M4 LINE L1 2936 3722 -2424 1010 149 11 35 chr10 91986167 91986341 -53602947 - MER54B LTR ERVL -1 792 623 499 99 25 0 chr10 91986461 91986542 -53602746 + L1PA16 LINE L1 6077 6159 -7 180 0 0 0 chr10 91986545 91986565 -53602723 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1253 124 0 11 chr10 91986596 91986773 -53602515 + AluSg/x SINE Alu 121 295 -17 754 183 286 4 chr10 91986786 91987027 -53602261 + MER34C LTR ERV1 258 566 -19 24 32 0 0 chr10 91987233 91987264 -53602024 + AT_rich Low_complexity Low_complexity 1 31 0 24 0 0 0 chr10 91987316 91987340 -53601948 + GC_rich Low_complexity Low_complexity 1 24 0 344 299 42 0 chr10 91989574 91989718 -53599570 - L1MC4a LINE L1 -1853 5955 5806 297 240 10 87 chr10 91990325 91990381 -53598907 - MER31B LTR ERV1 -370 96 50 1650 131 6 97 chr10 91990381 91990701 -53598587 + AluJo SINE Alu 1 291 -21 297 240 10 87 chr10 91990701 91990748 -53598540 - MER31B LTR ERV1 -416 50 1 213 344 82 8 chr10 91991872 91991994 -53597294 - L2 LINE L2 -5 3267 3137 357 24 0 0 chr10 91992071 91992113 -53597175 + (TG)n Simple_repeat Simple_repeat 2 43 0 3057 252 63 17 chr10 91992663 91993658 -53595630 - L1ME1 LINE L1 -17 6149 5104 198 103 0 0 chr10 91993926 91993955 -53595333 + (TTCC)n Simple_repeat Simple_repeat 2 30 0 2234 115 6 3 chr10 91994469 91994781 -53594507 - AluSq SINE Alu 0 313 1 621 136 59 0 chr10 91994801 91994919 -53594369 - FLAM_C SINE Alu -4 129 5 277 200 15 0 chr10 91995133 91995198 -53594090 + L1MA10 LINE L1 6170 6235 -99 5627 118 11 6 chr10 91995230 91996076 -53593212 - L1PA11 LINE L1 0 6174 5325 1277 138 25 10 chr10 91996220 91996423 -53592865 + MER21A LTR ERV1 723 928 -3 539 255 86 32 chr10 91996424 91996702 -53592586 + L1M4 LINE L1 2985 3277 -2869 231 278 10 21 chr10 91996744 91996841 -53592447 + L1P LINE L1 3343 3438 -2708 636 294 206 38 chr10 91997144 91997890 -53591398 + L1M4 LINE L1 3683 4554 -1592 678 147 69 9 chr10 91997946 91998062 -53591226 + FLAM_C SINE Alu 11 133 -10 251 322 0 55 chr10 91998066 91998268 -53591020 + L1M4 LINE L1 4577 4767 -1379 824 188 110 47 chr10 91998455 91998710 -53590578 + L1MC/D LINE L1 3902 4172 -1974 2771 224 67 16 chr10 91998737 91999730 -53589558 + L1MC/D LINE L1 4530 5575 -667 2184 135 3 0 chr10 92000809 92001120 -53588168 - AluSx SINE Alu 0 312 1 347 219 140 0 chr10 92001310 92001424 -53587864 - L1MC5 LINE L1 -796 7165 7036 321 202 225 94 chr10 92001527 92001672 -53587616 - L1ME3 LINE L1 -6 6156 5973 721 242 21 26 chr10 92001672 92001862 -53587426 + MER5A DNA MER1_type 1 189 0 321 202 225 94 chr10 92001862 92001929 -53587359 - L1ME3 LINE L1 -189 5973 5916 474 256 107 14 chr10 92001981 92002327 -53586961 - L1MCc LINE L1 -5813 610 185 1537 243 46 15 chr10 92002428 92002823 -53586465 - L1MC4 LINE L1 -1161 6881 6475 1577 144 23 146 chr10 92002823 92003220 -53586068 - MER7A DNA MER2_type 0 346 1 1378 90 53 0 chr10 92004875 92005064 -53584224 + AluSg/x SINE Alu 100 298 -12 189 0 0 0 chr10 92005542 92005563 -53583725 + (CA)n Simple_repeat Simple_repeat 2 22 0 318 80 0 0 chr10 92005563 92005613 -53583675 + (GA)n Simple_repeat Simple_repeat 1 50 0 1283 83 35 0 chr10 92005648 92005817 -53583471 + AluSq SINE Alu 1 175 -138 5466 174 35 14 chr10 92006017 92007701 -53581587 - L1PB4 LINE L1 -329 5827 4114 9784 87 0 23 chr10 92008254 92009558 -53579730 + HERVL-A2 LTR ERVL 4381 5654 0 1325 114 37 18 chr10 92009558 92009787 -53579501 + MLT2A2 LTR ERVL 1 181 -272 670 202 0 0 chr10 92010019 92010138 -53579150 + FLAM_A SINE Alu 10 128 -14 1712 162 36 26 chr10 92010141 92010450 -53578838 + AluSx SINE Alu 1 312 0 698 332 79 8 chr10 92010773 92011165 -53578123 + L3 LINE CR1 1146 1565 -12 330 282 57 43 chr10 92011150 92011359 -53577929 - L2 LINE L2 -5 3308 3097 * 1789 176 7 7 chr10 92011503 92011810 -53577478 - AluJb SINE Alu -5 307 1 294 241 259 6 chr10 92012506 92012664 -53576624 - L2 LINE L2 0 3313 3116 899 173 60 0 chr10 92013437 92013587 -53575701 - AluJb SINE Alu -153 159 1 3340 209 81 24 chr10 92013609 92014485 -53574803 - L1ME2 LINE L1 -8 6156 5232 2228 117 0 0 chr10 92014590 92014880 -53574408 - AluSx SINE Alu -20 292 3 355 140 18 0 chr10 92015167 92015224 -53574064 + MSTB LTR MaLR 1 58 -368 1307 132 36 141 chr10 92015732 92016066 -53573222 - AluJo SINE Alu -3 299 1 2100 109 0 7 chr10 92016578 92016886 -53572402 + AluSg SINE Alu 1 306 0 1885 171 10 0 chr10 92016891 92017195 -53572093 + AluJo SINE Alu 1 307 -5 2115 110 24 3 chr10 92017331 92017622 -53571666 - AluSx SINE Alu -15 297 1 519 217 143 53 chr10 92017623 92017812 -53571476 - MLT1E2 LTR MaLR -333 293 88 772 181 0 0 chr10 92017966 92018093 -53571195 + FLAM_A SINE Alu 4 130 -3 1458 169 47 36 chr10 92018126 92018404 -53570884 + AluJo SINE Alu 1 281 -31 194 194 254 15 chr10 92018439 92018506 -53570782 - L2 LINE L2 -5 3267 3185 644 263 109 20 chr10 92019399 92019692 -53569596 + L1MC4 LINE L1 7683 8001 -41 356 264 19 9 chr10 92020027 92020133 -53569155 + GA-rich Low_complexity Low_complexity 1 107 0 1891 163 12 12 chr10 92020748 92021073 -53568215 + LOR1b LTR ERV1 55 379 -82 2224 90 38 0 chr10 92022066 92022354 -53566934 + AluY SINE Alu 1 299 -12 2281 84 0 3 chr10 92022656 92022969 -53566319 - AluY SINE Alu 0 312 1 2309 77 3 3 chr10 92024019 92024318 -53564970 + AluY SINE Alu 1 299 -12 1759 209 62 27 chr10 92025663 92026147 -53563141 - MLT1D LTR MaLR -4 501 1 273 324 19 9 chr10 92026208 92026316 -53562972 - L3 LINE CR1 -573 1004 896 186 233 0 123 chr10 92026624 92026697 -53562591 - L2 LINE L2 -9 3304 3241 1706 180 7 3 chr10 92026734 92027023 -53562265 + AluJo SINE Alu 1 290 -22 2582 64 0 13 chr10 92032110 92032421 -53556867 + AluY SINE Alu 1 307 -4 2300 78 3 0 chr10 92032634 92032941 -53556347 + AluSq SINE Alu 1 308 0 180 0 0 0 chr10 92033448 92033468 -53555820 + (CACAC)n Simple_repeat Simple_repeat 1 20 0 202 194 0 0 chr10 92034373 92034409 -53554879 + GA-rich Low_complexity Low_complexity 5 40 0 2216 108 0 0 chr10 92035437 92035732 -53553556 + AluSx SINE Alu 1 295 -17 734 238 92 35 chr10 92035738 92036174 -53553114 + L1MEc LINE L1 38 557 -5839 374 143 0 0 chr10 92036456 92036521 -53552767 - AluJ/FLAM SINE Alu -244 58 1 4843 148 61 23 chr10 92036641 92037032 -53552256 - L1MA8 LINE L1 -3 6288 5913 2288 91 0 10 chr10 92037032 92037328 -53551960 - AluY SINE Alu -18 293 1 4843 148 61 23 chr10 92037328 92038203 -53551085 - L1MA8 LINE L1 -378 5913 4958 228 174 29 14 chr10 92039568 92039637 -53549651 + (CATATA)n Simple_repeat Simple_repeat 1 70 0 2040 117 81 15 chr10 92039637 92039971 -53549317 - Tigger3(Golem) DNA MER2_type -1 3028 2673 230 214 0 0 chr10 92039968 92040010 -53549278 + MSTA LTR MaLR 385 426 -2 * 6791 204 27 46 chr10 92040013 92041016 -53548272 - L1M4 LINE L1 -841 5305 4350 1696 166 10 33 chr10 92041016 92041323 -53547965 + AluJo SINE Alu 1 300 -12 6791 204 27 46 chr10 92041323 92042131 -53547157 - L1M4 LINE L1 -1796 4350 3528 21 57 0 0 chr10 92042144 92042179 -53547109 + AT_rich Low_complexity Low_complexity 1 35 0 223 337 0 22 chr10 92042380 92042472 -53546816 + GA-rich Low_complexity Low_complexity 2 91 0 2513 80 0 0 chr10 92042644 92042955 -53546333 - AluY SINE Alu 0 311 1 297 365 60 6 chr10 92043047 92043214 -53546074 + MIR3 SINE MIR 5 180 -28 584 267 84 18 chr10 92043282 92043507 -53545781 + MIR SINE MIR 15 254 -8 182 309 88 103 chr10 92043513 92043931 -53545357 - L2 LINE L2 -33 3239 2828 579 216 24 8 chr10 92044403 92044528 -53544760 + L1MD3 LINE L1 7151 7277 -718 650 202 0 8 chr10 92044531 92044655 -53544633 + MLT1F1 LTR MaLR 3 125 -442 1418 182 95 3 chr10 92044655 92044951 -53544337 + L1MD3 LINE L1 7404 7726 -269 2179 110 0 0 chr10 92044987 92045296 -53543992 + AluSx SINE Alu 4 312 0 739 158 5 133 chr10 92045297 92045493 -53543795 + L1MD3 LINE L1 7649 7819 -176 329 164 33 0 chr10 92045493 92045554 -53543734 + MER81 DNA DNA 3 65 -49 999 189 0 0 chr10 92045563 92045727 -53543561 - AluSg/x SINE Alu -10 300 137 475 276 0 0 chr10 92045751 92045849 -53543439 + MER81 DNA DNA 17 114 0 671 207 35 0 chr10 92045866 92046011 -53543277 + L1MD3 LINE L1 7832 7981 -14 9156 115 109 29 chr10 92046079 92047660 -53541628 - pTR5 LTR ERV1 0 2438 732 1058 259 133 48 chr10 92048631 92049114 -53540174 - Tigger8 DNA MER2_type -31 635 112 529 280 101 47 chr10 92049250 92049814 -53539474 - L1MC4a LINE L1 -588 5576 5467 3639 152 86 27 chr10 92049814 92050231 -53539057 - LTR48 LTR ERV1 0 787 396 2512 78 0 0 chr10 92050231 92050539 -53538749 + AluY SINE Alu 1 308 -3 3639 152 86 27 chr10 92050539 92050864 -53538424 - LTR48 LTR ERV1 -391 396 1 529 280 101 47 chr10 92050864 92051049 -53538239 - L1MC4a LINE L1 -697 5467 5293 1588 207 127 24 chr10 92051051 92051509 -53537779 - MLT1D LTR MaLR 0 505 1 3986 137 1 55 chr10 92051993 92052664 -53536624 - MER41B LTR ERV1 0 635 1 5892 62 42 8 chr10 92052704 92053458 -53535830 + LTR17 LTR ERV1 1 780 0 2429 85 0 3 chr10 92053992 92054298 -53534990 + AluSq SINE Alu 1 305 -8 1022 180 16 0 chr10 92054430 92054613 -53534675 - MER5A DNA MER1_type 0 189 4 553 352 48 17 chr10 92054639 92055214 -53534074 + ERVL LTR ERVL 1528 2077 -2919 589 296 19 0 chr10 92055345 92055507 -53533781 + ERVL LTR ERVL 4954 5118 -646 205 138 17 17 chr10 92055512 92055570 -53533718 + (TA)n Simple_repeat Simple_repeat 2 59 0 911 279 85 51 chr10 92055570 92055796 -53533492 + L1M4 LINE L1 1576 1793 -4422 291 54 0 0 chr10 92055796 92055833 -53533455 + (CA)n Simple_repeat Simple_repeat 2 38 0 911 279 85 51 chr10 92055833 92056438 -53532850 + L1M4 LINE L1 1793 2376 -3839 2286 67 0 3 chr10 92056438 92056720 -53532568 + AluY SINE Alu 17 297 -14 911 279 85 51 chr10 92056720 92056740 -53532548 + L1M4 LINE L1 2376 2394 -3821 2376 54 0 4 chr10 92056740 92057020 -53532268 + AluY SINE Alu 17 295 -16 911 279 85 51 chr10 92057020 92057347 -53531941 + L1M4 LINE L1 2394 2762 -3453 2776 263 73 42 chr10 92058247 92058290 -53530998 + L1M4 LINE L1 2748 2788 -3427 2495 85 0 0 chr10 92058290 92058595 -53530693 + AluSq SINE Alu 1 305 -8 2776 263 73 42 chr10 92058595 92059902 -53529386 + L1M4 LINE L1 2788 4141 -2074 1165 143 5 16 chr10 92059904 92060093 -53529195 + AluSg/x SINE Alu 121 307 -5 2109 215 41 121 chr10 92060094 92061066 -53528222 + L1M4 LINE L1 4149 5198 -1033 1611 190 0 40 chr10 92061066 92061190 -53528098 + AluJb SINE Alu 5 132 -180 2096 121 21 0 chr10 92061190 92061479 -53527809 - AluSg SINE Alu -15 295 1 1611 190 0 40 chr10 92061479 92061675 -53527613 + AluJb SINE Alu 132 312 0 2109 215 41 121 chr10 92061675 92061904 -53527384 + L1M4 LINE L1 5198 5212 -1019 258 32 0 0 chr10 92061904 92061935 -53527353 + (CA)n Simple_repeat Simple_repeat 2 32 0 2109 215 41 121 chr10 92061935 92062299 -53526989 + L1M4 LINE L1 5212 5604 -627 228 186 0 139 chr10 92062301 92062331 -53526957 + L1M4 LINE L1 5837 5870 -383 2043 132 139 13 chr10 92062331 92062711 -53526577 + MSTA LTR MaLR 1 428 0 228 186 0 139 chr10 92062711 92062766 -53526522 + L1M4 LINE L1 5870 5910 -343 1004 88 0 20 chr10 92063985 92064133 -53525155 - L1PA4 LINE L1 0 6155 6011 2406 70 0 10 chr10 92064276 92064574 -53524714 - AluY SINE Alu -16 295 1 950 290 109 60 chr10 92064574 92065095 -53524193 - LTR67 LTR ERVL -9 548 2 27 0 0 0 chr10 92065362 92065389 -53523899 + AT_rich Low_complexity Low_complexity 1 27 0 361 321 60 6 chr10 92065694 92065862 -53523426 - HERVL LTR ERVL -262 5392 5216 557 313 32 29 chr10 92066195 92066441 -53522847 + MIR SINE MIR 16 262 0 189 0 0 0 chr10 92067593 92067614 -53521674 + (CA)n Simple_repeat Simple_repeat 1 21 0 471 290 124 16 chr10 92067867 92068053 -53521235 - MIR SINE MIR -6 256 51 185 278 0 83 chr10 92068331 92068403 -53520885 - MIR SINE MIR -166 96 31 1179 137 151 33 chr10 92069481 92069752 -53519536 + LTR50 LTR ERVL 18 320 -475 1127 193 110 3 chr10 92069782 92070072 -53519216 + LTR50 LTR ERVL 473 793 -2 566 261 45 27 chr10 92070223 92070445 -53518843 + MIR SINE MIR 36 261 -1 1400 157 10 57 chr10 92070626 92070926 -53518362 + LTR55 LTR ERV 1 286 -262 326 282 88 69 chr10 92071000 92071305 -53517983 - L1M4 LINE L1 -1310 4836 4526 2269 107 0 0 chr10 92071337 92071636 -53517652 + AluSx SINE Alu 1 299 -13 249 262 83 0 chr10 92071640 92071724 -53517564 - L2 LINE L2 -22 3250 3160 259 324 60 0 chr10 92072552 92072679 -53516609 + L1M1 LINE L1 5338 5466 -710 722 200 7 7 chr10 92072713 92072848 -53516440 - AluJb SINE Alu -14 298 164 330 326 55 33 chr10 92072872 92073145 -53516143 + L1ME3A LINE L1 5580 5858 -312 1897 142 3 45 chr10 92073401 92073528 -53515760 + AluJo SINE Alu 1 132 -180 1939 89 19 92 chr10 92073528 92073842 -53515446 - AluSx SINE Alu -21 291 1 1897 142 3 45 chr10 92073842 92074025 -53515263 + AluJo SINE Alu 132 298 -14 295 326 163 18 chr10 92074553 92074835 -53514453 + MLT1K LTR MaLR 153 475 -113 412 86 29 0 chr10 92076425 92076495 -53512793 + (CA)n Simple_repeat Simple_repeat 2 73 0 227 295 26 13 chr10 92076792 92076870 -53512418 - MLT1I LTR MaLR -102 307 229 2139 134 76 15 chr10 92078782 92079125 -53510163 + THE1B LTR MaLR 1 364 0 1155 203 83 5 chr10 92080115 92080417 -53508871 - MER33 DNA MER1_type -14 310 1 650 239 78 18 chr10 92081255 92081473 -53507815 + MIR SINE MIR 3 233 -29 4822 208 43 25 chr10 92082943 92083089 -53506199 + L1MB7 LINE L1 4139 4281 -1903 2244 151 6 14 chr10 92083089 92083223 -53506065 - THE1B LTR MaLR -2 362 228 2632 58 0 3 chr10 92083223 92083535 -53505753 - AluY SINE Alu 0 311 1 2244 151 6 14 chr10 92083535 92083765 -53505523 - THE1B LTR MaLR -136 228 1 9901 104 45 38 chr10 92083765 92084917 -53504371 - THE1B-int LTR MaLR 0 1580 413 2368 91 3 0 chr10 92084917 92085213 -53504075 + AluSp SINE Alu 5 301 -12 9901 104 45 38 chr10 92085213 92085629 -53503659 - THE1B-int LTR MaLR -1167 413 1 2247 120 67 6 chr10 92085629 92085971 -53503317 - THE1B LTR MaLR 0 364 2 4822 208 43 25 chr10 92085971 92087331 -53501957 + L1MB7 LINE L1 4280 5670 -514 1398 187 8 23 chr10 92087338 92087595 -53501693 - MER61E LTR ERV1 -40 529 277 5884 75 30 5 chr10 92087595 92088356 -53500932 + LTR17 LTR ERV1 1 780 0 14556 64 32 6 chr10 92088356 92090312 -53498976 + HERV17 LTR ERV1 1 2007 -6619 10306 55 3 4 chr10 92090304 92091630 -53497658 + HERV17 LTR ERV1 2430 3754 -4872 * 4731 52 8 3 chr10 92091609 92092221 -53497067 + HERV17 LTR ERV1 5405 6019 -2607 * 282 51 0 0 chr10 92092214 92092253 -53497035 + HERV17 LTR ERV1 7510 7548 -1078 * 2304 62 0 0 chr10 92092243 92092535 -53496753 + HERV17 LTR ERV1 8335 8626 0 5843 66 33 5 chr10 92092535 92093294 -53495994 + LTR17 LTR ERV1 1 780 0 1860 118 0 0 chr10 92093294 92093574 -53495714 - MER61E LTR ERV1 -289 280 1 1109 225 59 4 chr10 92093574 92093972 -53495316 + L1MB7 LINE L1 5667 6105 -73 1195 147 0 11 chr10 92093975 92094152 -53495136 - AluJb SINE Alu -14 298 124 185 0 40 0 chr10 92094226 92094251 -53495037 + (CAAA)n Simple_repeat Simple_repeat 1 26 0 2028 112 3 30 chr10 92094311 92094616 -53494672 + AluSx SINE Alu 7 303 -9 2107 143 74 11 chr10 92097945 92098379 -53490909 + L1MA4 LINE L1 5839 6299 -1 183 302 81 12 chr10 92098858 92098944 -53490344 + L2 LINE L2 3143 3234 -38 1366 164 33 18 chr10 92099149 92099484 -53489804 + MER61C LTR ERV1 1 434 0 25 0 0 0 chr10 92102028 92102053 -53487235 + AT_rich Low_complexity Low_complexity 1 25 0 1947 110 0 8 chr10 92102968 92103232 -53486056 + AluSx SINE Alu 48 309 -3 221 238 0 0 chr10 92103674 92103716 -53485572 + (TG)n Simple_repeat Simple_repeat 2 43 0 216 272 37 0 chr10 92103675 92103756 -53485532 + (TATATG)n Simple_repeat Simple_repeat 5 88 0 * 221 0 35 0 chr10 92106240 92106269 -53483019 + (TC)n Simple_repeat Simple_repeat 1 30 0 * 261 0 0 0 chr10 92106268 92106297 -53482991 + (CA)n Simple_repeat Simple_repeat 1 29 0 37 0 0 0 chr10 92107612 92107649 -53481639 + AT_rich Low_complexity Low_complexity 1 37 0 434 370 76 35 chr10 92108136 92108479 -53480809 - L2 LINE L2 -12 3260 2904 196 355 60 44 chr10 92108520 92108768 -53480520 - L2 LINE L2 -479 2835 2584 189 286 0 0 chr10 92109306 92109355 -53479933 + L2 LINE L2 3265 3313 0 251 232 0 95 chr10 92109719 92109814 -53479474 + MIR SINE MIR 175 260 -2 403 287 94 74 chr10 92110096 92110340 -53478948 + MIR SINE MIR 3 251 -11 372 327 63 19 chr10 92110405 92110564 -53478724 - MIR SINE MIR -56 206 41 22 0 0 0 chr10 92110656 92110678 -53478610 + AT_rich Low_complexity Low_complexity 1 22 0 2145 98 0 11 chr10 92111836 92112153 -53477135 - AluSg SINE Alu 0 314 1 547 293 124 36 chr10 92113268 92113599 -53475689 + L1ME4a LINE L1 5575 5934 -187 299 263 123 114 chr10 92113729 92113965 -53475323 + MIR SINE MIR 18 255 -7 188 217 33 33 chr10 92115138 92115198 -53474090 - MIR SINE MIR -93 169 110 2240 74 3 14 chr10 92115426 92115722 -53473566 - AluY SINE Alu -18 293 1 2403 85 0 3 chr10 92115994 92116300 -53472988 + AluY SINE Alu 1 305 -6 303 71 0 0 chr10 92116788 92116830 -53472458 + (TA)n Simple_repeat Simple_repeat 2 43 0 32 0 0 0 chr10 92118975 92119007 -53470281 + AT_rich Low_complexity Low_complexity 1 32 0 2182 105 0 3 chr10 92119230 92119525 -53469763 + AluSg SINE Alu 1 294 -16 220 336 93 0 chr10 92119711 92119818 -53469470 - MIR3 SINE MIR -9 199 83 441 324 64 6 chr10 92120593 92120766 -53468522 + MIR3 SINE MIR 17 199 -9 205 270 20 90 chr10 92121094 92121194 -53468094 + MER5B DNA MER1_type 10 102 -76 1437 214 92 43 chr10 92121681 92122080 -53467208 + L1MD2 LINE L1 6 431 -6109 2524 50 0 0 chr10 92122080 92122378 -53466910 + AluY SINE Alu 1 298 -13 1437 214 92 43 chr10 92122378 92122423 -53466865 + L1MD2 LINE L1 431 472 -6068 * 1878 238 112 15 chr10 92122421 92123697 -53465591 + L1MD2 LINE L1 2163 3545 -2995 753 163 28 0 chr10 92123702 92123843 -53465445 + MER41A LTR ERV1 410 554 0 1292 169 13 0 chr10 92123869 92124100 -53465188 + MER41B-int LTR ERV1 5710 5943 -3 3055 135 9 36 chr10 92124101 92124452 -53464836 + MER41B LTR ERV1 5 337 -298 3450 138 0 31 chr10 92124452 92124996 -53464292 + MER1A DNA MER1_type 1 527 0 3055 135 9 36 chr10 92124996 92125201 -53464087 + MER41B LTR ERV1 337 546 -89 3497 245 37 20 chr10 92125205 92126360 -53462928 + L1MD2 LINE L1 3532 4711 -1829 2242 114 0 3 chr10 92126360 92126667 -53462621 - AluY SINE Alu -5 306 1 3497 245 37 20 chr10 92126667 92126743 -53462545 + L1MD2 LINE L1 4711 4784 -1756 40131 57 2 0 chr10 92126788 92132921 -53456367 + L1PA5 LINE L1 13 6154 0 374 221 11 0 chr10 92132940 92133035 -53456253 + L1MD2 LINE L1 4848 4943 -1597 1295 227 82 22 chr10 92133058 92133559 -53455729 + L1MD2 LINE L1 6167 8169 -33 246 128 0 0 chr10 92134148 92134187 -53455101 + (CA)n Simple_repeat Simple_repeat 2 40 0 1994 128 6 40 chr10 92134248 92134389 -53454899 + AluSx SINE Alu 1 145 -167 2062 76 79 11 chr10 92134389 92134666 -53454622 + AluY SINE Alu 1 296 -15 396 0 0 0 chr10 92134667 92134711 -53454577 + (TA)n Simple_repeat Simple_repeat 1 44 0 1994 128 6 40 chr10 92134711 92134888 -53454400 + AluSx SINE Alu 144 310 -2 2124 100 0 0 chr10 92135255 92135526 -53453762 - AluSp SINE Alu -14 299 29 638 207 87 0 chr10 92136625 92136775 -53452513 - MER3 DNA MER1_type 0 209 47 36 23 0 0 chr10 92137249 92137292 -53451996 + AT_rich Low_complexity Low_complexity 1 43 0 414 305 42 47 chr10 92137809 92138022 -53451266 + L1ME4a LINE L1 5885 6096 -25 1718 160 82 0 chr10 92138342 92138610 -53450678 + AluJb SINE Alu 1 290 -22 250 188 62 0 chr10 92139048 92139096 -53450192 + L2 LINE L2 3257 3307 -6 456 360 7 0 chr10 92139320 92139470 -53449818 + MIR3 SINE MIR 30 180 -28 2363 81 3 0 chr10 92141922 92142229 -53447059 + AluY SINE Alu 1 308 -3 1583 190 3 14 chr10 92142529 92142819 -53446469 + AluJb SINE Alu 1 287 -25 246 261 0 0 chr10 92142992 92143038 -53446250 - Tigger5 DNA MER2_type 0 2323 2278 416 218 0 13 chr10 92143049 92143127 -53446161 + Tigger5 DNA MER2_type 2242 2318 -5 293 176 0 0 chr10 92143128 92143179 -53446109 - Tigger5 DNA MER2_type -2244 79 29 355 235 132 37 chr10 92143392 92143528 -53445760 + MLT1L LTR MaLR 98 246 -369 275 271 57 0 chr10 92143595 92143665 -53445623 + MLT1L LTR MaLR 327 400 -215 289 255 157 83 chr10 92143898 92143977 -53445311 - MIR SINE MIR -29 233 161 2468 81 0 7 chr10 92143977 92144286 -53445002 - AluSx SINE Alu -5 307 1 289 255 157 83 chr10 92144286 92144422 -53444866 - MIR SINE MIR -101 161 2 354 321 133 18 chr10 92144761 92144926 -53444362 - MIR3 SINE MIR -7 201 18 342 270 81 44 chr10 92145601 92145897 -53443391 + L1MC5 LINE L1 7423 7729 -232 2109 122 0 10 chr10 92146082 92146378 -53442910 - AluSx SINE Alu -19 293 1 21 57 0 0 chr10 92146669 92146704 -53442584 + AT_rich Low_complexity Low_complexity 1 35 0 34 0 0 0 chr10 92146825 92146859 -53442429 + AT_rich Low_complexity Low_complexity 1 34 0 400 296 89 0 chr10 92148482 92148617 -53440671 - MIR SINE MIR -3 259 113 216 0 0 0 chr10 92148627 92148651 -53440637 + (A)n Simple_repeat Simple_repeat 1 24 0 187 335 90 13 chr10 92148673 92148828 -53440460 - L2 LINE L2 -252 3020 2854 21 36 0 0 chr10 92149474 92149502 -53439786 + AT_rich Low_complexity Low_complexity 1 28 0 253 241 62 62 chr10 92149788 92149900 -53439388 + L1ME3 LINE L1 5558 5669 -452 270 246 0 0 chr10 92150096 92150153 -53439135 - MIR SINE MIR -2 260 204 884 125 7 0 chr10 92150185 92150329 -53438959 - L1MA5A LINE L1 0 6297 6153 228 352 151 48 chr10 92150636 92150994 -53438294 - L2 LINE L2 -580 2734 2340 433 172 17 78 chr10 92151004 92151120 -53438168 - LTR29 LTR ERV1 -513 109 1 246 105 0 0 chr10 92151164 92151202 -53438086 + (CA)n Simple_repeat Simple_repeat 1 38 0 208 358 69 47 chr10 92151562 92151836 -53437452 - L2 LINE L2 -1573 1741 1462 2431 62 0 34 chr10 92151852 92152174 -53437114 + AluY SINE Alu 1 311 0 2256 82 41 0 chr10 92152627 92152920 -53436368 + AluY SINE Alu 1 305 -6 2289 113 0 3 chr10 92153041 92153350 -53435938 + AluSx SINE Alu 3 310 -2 468 0 0 0 chr10 92153373 92153425 -53435863 + (CA)n Simple_repeat Simple_repeat 1 52 0 549 249 94 40 chr10 92153848 92154049 -53435239 + MLT1I LTR MaLR 181 392 -17 917 234 39 52 chr10 92155169 92155455 -53433833 + L1ME3 LINE L1 5873 6154 -8 222 239 11 87 chr10 92155866 92155958 -53433330 + MER5A DNA MER1_type 91 175 -14 1245 242 67 33 chr10 92156618 92157344 -53431944 + L1ME1 LINE L1 773 1490 -4916 4745 216 76 87 chr10 92157354 92158275 -53431013 + L1ME1 LINE L1 3015 3945 -2461 1958 116 0 50 chr10 92158275 92158577 -53430711 + AluSx SINE Alu 16 302 -10 4745 216 76 87 chr10 92158577 92158843 -53430445 + L1ME1 LINE L1 3945 4212 -2194 1610 203 0 4 chr10 92158843 92159124 -53430164 + AluJb SINE Alu 3 282 -30 4745 216 76 87 chr10 92159124 92159394 -53429894 + L1ME1 LINE L1 4212 4483 -1923 1730 146 8 0 chr10 92159394 92159654 -53429634 + AluSx SINE Alu 38 299 -13 4745 216 76 87 chr10 92159654 92160616 -53428672 + L1ME1 LINE L1 4483 5409 -997 2048 109 0 17 chr10 92160633 92160935 -53428353 + AluSx SINE Alu 16 312 0 205 100 40 0 chr10 92160939 92160989 -53428299 + (TA)n Simple_repeat Simple_repeat 1 52 0 21 0 0 0 chr10 92160994 92161015 -53428273 + AT_rich Low_complexity Low_complexity 1 21 0 494 113 49 0 chr10 92161015 92161157 -53428131 + (TA)n Simple_repeat Simple_repeat 2 150 0 516 87 87 0 chr10 92161190 92161453 -53427835 + (TA)n Simple_repeat Simple_repeat 1 285 0 2552 229 81 25 chr10 92161673 92162451 -53426837 + L1ME1 LINE L1 5497 6306 -120 2225 117 13 0 chr10 92163082 92163390 -53425898 + AluSx SINE Alu 1 312 0 2406 103 26 9 chr10 92163459 92163808 -53425480 - THE1B LTR MaLR -9 355 1 231 173 77 0 chr10 92164166 92164218 -53425070 + L1ME1 LINE L1 6367 6422 -4 1743 205 66 23 chr10 92164224 92164663 -53424625 + MLT1C LTR MaLR 6 463 -4 571 296 49 27 chr10 92164738 92165144 -53424144 + L1MDb LINE L1 2572 2986 -3420 406 220 99 11 chr10 92165155 92165246 -53424042 + MER58 DNA MER1_type 2 100 -241 386 220 22 0 chr10 92165260 92165351 -53423937 + MER58 DNA MER1_type 2328 2420 0 246 231 185 0 chr10 92165924 92165989 -53423299 - MIR SINE MIR -3 259 183 976 215 0 0 chr10 92167216 92167388 -53421900 + FAM SINE Alu 4 175 0 304 255 53 11 chr10 92167584 92167678 -53421610 - L1M4 LINE L1 -1477 4669 4572 427 274 60 6 chr10 92168260 92168428 -53420860 + MER112 DNA MER1_type 67 243 -17 2181 93 26 7 chr10 92168785 92169087 -53420201 - AluSp SINE Alu -5 308 1 397 280 68 26 chr10 92169094 92169251 -53420037 - MIR SINE MIR -51 211 43 2132 123 0 0 chr10 92169273 92169565 -53419723 - AluSx SINE Alu -20 292 1 1702 221 31 16 chr10 92169622 92170075 -53419213 + L1ME1 LINE L1 5702 6161 -5 790 171 104 0 chr10 92170691 92170855 -53418433 + AluJb SINE Alu 127 307 -5 740 289 34 25 chr10 92170889 92171242 -53418046 + L1ME3A LINE L1 4925 5280 -866 971 269 67 44 chr10 92171256 92171834 -53417454 + L1ME3A LINE L1 5357 5949 -221 1923 212 104 25 chr10 92172606 92173171 -53416117 + L1ME3A LINE L1 5556 6165 -5 2362 79 0 0 chr10 92173205 92173497 -53415791 + AluY SINE Alu 1 292 -19 233 302 47 64 chr10 92173638 92173810 -53415478 + MIR SINE MIR 47 215 -47 7082 55 20 23 chr10 92174504 92175941 -53413347 - L1PA7 LINE L1 0 6154 4718 227 213 0 0 chr10 92176185 92176232 -53413056 - L1ME LINE L1 -205 5916 5870 252 308 75 8 chr10 92176266 92176399 -53412889 - L1MC4 LINE L1 -295 7747 7606 2506 71 7 0 chr10 92176602 92176911 -53412377 + AluY SINE Alu 1 311 0 1332 275 87 55 chr10 92177099 92178126 -53411162 + HAL1 LINE L1 831 1890 -617 219 69 0 0 chr10 92179447 92179476 -53409812 + (A)n Simple_repeat Simple_repeat 1 29 0 420 274 189 0 chr10 92179599 92179752 -53409536 - MIR SINE MIR -16 246 65 1423 123 0 5 chr10 92180744 92180947 -53408341 + AluSg/x SINE Alu 101 302 -10 2145 104 17 0 chr10 92181133 92181421 -53407867 - AluSx SINE Alu -19 293 1 318 80 0 0 chr10 92181456 92181506 -53407782 + (TC)n Simple_repeat Simple_repeat 1 50 0 189 0 0 0 chr10 92181506 92181527 -53407761 + (TG)n Simple_repeat Simple_repeat 2 22 0 2426 64 0 0 chr10 92182005 92182303 -53406985 - AluY SINE Alu -12 299 2 2379 56 13 3 chr10 92182304 92182610 -53406678 - AluY SINE Alu -2 309 1 207 157 0 0 chr10 92182968 92183019 -53406269 + T-rich Low_complexity Low_complexity 1 51 0 200 279 152 0 chr10 92183406 92183485 -53405803 + MIR SINE MIR 45 135 -73 773 296 18 14 chr10 92183768 92183988 -53405300 + MIR SINE MIR 41 261 -1 357 265 106 18 chr10 92184011 92184181 -53405107 - L1MC4 LINE L1 -2 8040 7856 276 130 0 0 chr10 92185186 92185232 -53404056 + (TG)n Simple_repeat Simple_repeat 1 46 0 5728 167 44 39 chr10 92185374 92186104 -53403184 + L1MC2 LINE L1 4582 5307 -1037 1918 103 29 32 chr10 92186104 92186416 -53402872 + L1PA16 LINE L1 5855 6165 -1 5728 167 44 39 chr10 92186416 92186911 -53402377 + L1MC2 LINE L1 5307 5798 -546 1767 160 14 7 chr10 92186911 92187199 -53402089 - AluJb SINE Alu -22 290 1 5728 167 44 39 chr10 92187199 92187701 -53401587 + L1MC2 LINE L1 5798 6335 -9 3290 220 56 63 chr10 92187747 92188776 -53400512 + L1M4 LINE L1 18 1039 -5503 1243 211 105 63 chr10 92188840 92189287 -53400001 + L1M4 LINE L1 1537 2003 -4643 522 164 66 8 chr10 92189274 92189396 -53399892 + L1M4 LINE L1 3033 3161 -3483 * 1765 216 135 41 chr10 92189397 92189642 -53399646 + L1M4 LINE L1 3975 4196 -2448 282 56 0 0 chr10 92189642 92189678 -53399610 + (TA)n Simple_repeat Simple_repeat 1 36 0 1765 216 135 41 chr10 92189678 92190136 -53399152 + L1M4 LINE L1 4196 4744 -1900 2084 131 0 85 chr10 92190138 92190504 -53398784 + MER1B DNA MER1_type 3 337 0 384 342 128 16 chr10 92190708 92190965 -53398323 - L2 LINE L2 -2819 495 210 416 307 114 0 chr10 92192060 92192236 -53397052 - MIR SINE MIR -20 242 47 1495 210 0 17 chr10 92194491 92194791 -53394497 - AluJo SINE Alu -15 297 3 5311 195 60 7 chr10 92195079 92195146 -53394142 - L1 LINE L1 -1666 4480 4418 270 0 0 0 chr10 92195146 92195176 -53394112 + (TG)n Simple_repeat Simple_repeat 2 31 0 5311 195 60 7 chr10 92195176 92196267 -53393021 - L1 LINE L1 -1728 4418 3261 6014 157 20 23 chr10 92196413 92197557 -53391731 + L1P LINE L1 3418 4558 -1588 15110 147 53 30 chr10 92200342 92201058 -53388230 - L1P LINE L1 -2604 3542 2844 2400 84 0 28 chr10 92201058 92201378 -53387910 - AluY SINE Alu 0 311 1 15110 147 53 30 chr10 92201378 92203498 -53385790 - L1P LINE L1 -3302 2844 639 1291 258 155 59 chr10 92203500 92204388 -53384900 - Charlie7 DNA MER1_type -592 2020 1047 957 118 0 0 chr10 92204388 92204532 -53384756 + L1PA16 LINE L1 5886 6029 -137 2128 148 39 14 chr10 92204532 92204896 -53384392 - MSTC LTR MaLR -55 373 1 1169 284 171 41 chr10 92204899 92205632 -53383656 - Charlie7 DNA MER1_type -1605 1007 152 714 225 171 115 chr10 92205632 92206000 -53383288 - MLT1H LTR MaLR -1 548 141 2063 135 7 7 chr10 92206000 92206297 -53382991 - AluSx SINE Alu -15 297 1 714 225 171 115 chr10 92206297 92206443 -53382845 - MLT1H LTR MaLR -408 141 5 1169 284 171 41 chr10 92206443 92206541 -53382747 - Charlie7 DNA MER1_type -2460 152 68 6128 127 53 88 chr10 92207050 92207261 -53382027 - Tigger3b DNA MER2_type -1802 1226 1009 2690 184 35 63 chr10 92207261 92207831 -53381457 - MER41C LTR ERV1 0 554 1 6128 127 53 88 chr10 92207831 92208889 -53380399 - Tigger3b DNA MER2_type -2019 1009 1 1083 214 129 44 chr10 92208895 92209212 -53380076 - MER2 DNA MER2_type 0 344 1 2313 69 0 57 chr10 92209369 92209687 -53379601 - AluY SINE Alu -11 300 1 316 339 8 48 chr10 92210032 92210086 -53379202 + L1ME LINE L1 3757 3812 -2334 2435 67 0 3 chr10 92210086 92210384 -53378904 + AluY SINE Alu 1 297 -14 316 339 8 48 chr10 92210384 92210683 -53378605 + L1ME LINE L1 3812 4096 -2050 1411 177 34 0 chr10 92210731 92210997 -53378291 - L1MA4 LINE L1 -3 6297 6023 2394 80 3 0 chr10 92211128 92211430 -53377858 - AluSp SINE Alu -10 303 1 2353 102 0 0 chr10 92211900 92212204 -53377084 + AluSq SINE Alu 1 304 -9 411 352 74 28 chr10 92212221 92212692 -53376596 + L1ME LINE L1 4897 5389 -757 317 290 0 32 chr10 92212926 92213050 -53376238 + L1ME LINE L1 5637 5756 -365 1347 86 0 0 chr10 92214101 92214275 -53375013 - MLT2A2 LTR ERVL -279 174 1 286 254 153 0 chr10 92214954 92215072 -53374216 - MER103 DNA DNA -8 158 23 2838 7 0 0 chr10 92216370 92216674 -53372614 + AluYb8 SINE Alu 1 304 -14 289 291 39 62 chr10 92217485 92217664 -53371624 + L2 LINE L2 2570 2744 -570 343 259 84 46 chr10 92217942 92218073 -53371215 + L2 LINE L2 3172 3307 -6 759 69 0 0 chr10 92218073 92218175 -53371113 + (TGGA)n Simple_repeat Simple_repeat 4 105 0 200 287 132 31 chr10 92218175 92218304 -53370984 + L2 LINE L2 2714 2855 -459 307 352 33 22 chr10 92218329 92218511 -53370777 + LTR37B LTR ERV1 10 193 -275 2849 135 31 0 chr10 92218576 92218991 -53370297 - MSTA LTR MaLR 0 428 1 5398 159 67 30 chr10 92218991 92219117 -53370171 - MSTA-int LTR MaLR 0 1651 1531 2434 49 7 26 chr10 92219117 92219423 -53369865 + AluY SINE Alu 1 300 -11 5398 159 67 30 chr10 92219423 92220276 -53369012 - MSTA-int LTR MaLR -120 1531 635 180 216 60 95 chr10 92220350 92220466 -53368822 - L2 LINE L2 -251 3062 2951 689 188 42 36 chr10 92220579 92220771 -53368517 - LTR37B LTR ERV1 -45 423 231 3204 154 7 40 chr10 92220834 92221413 -53367875 - MSTA-int LTR MaLR -1091 560 1 2639 137 14 39 chr10 92221413 92221653 -53367635 - MSTA LTR MaLR 0 428 202 2407 94 0 3 chr10 92221653 92221952 -53367336 - AluSq SINE Alu -14 299 2 2639 137 14 39 chr10 92221952 92222150 -53367138 - MSTA LTR MaLR -226 202 1 696 176 53 37 chr10 92222150 92222337 -53366951 + LTR37B LTR ERV1 234 423 -45 194 288 62 25 chr10 92222478 92222558 -53366730 + L2 LINE L2 2972 3054 -218 261 167 0 0 chr10 92222568 92222622 -53366666 + (CA)n Simple_repeat Simple_repeat 2 55 0 1376 217 29 63 chr10 92222835 92223213 -53366075 - MLT1A1 LTR MaLR 0 365 1 4714 216 68 95 chr10 92223213 92224326 -53364962 - MLT1A1-int LTR MaLR 0 1735 694 290 27 27 0 chr10 92224326 92224363 -53364925 + MADE1 DNA Mariner 1 38 -42 4714 216 68 95 chr10 92224363 92225037 -53364251 - MLT1A1-int LTR MaLR -1041 694 3 885 236 42 38 chr10 92225092 92225329 -53363959 + MIR SINE MIR 2 239 -23 2253 86 0 0 chr10 92226025 92226305 -53362983 + AluSp SINE Alu 23 302 -11 250 290 95 18 chr10 92228189 92228358 -53360930 - MIR3 SINE MIR -7 201 20 2465 77 3 0 chr10 92228565 92228864 -53360424 + AluSp SINE Alu 1 300 -13 2141 121 0 7 chr10 92228893 92229191 -53360097 + AluSq SINE Alu 1 296 -17 1992 68 4 0 chr10 92229191 92229428 -53359860 - L1PA10 LINE L1 -18 6150 5913 803 240 36 5 chr10 92229461 92229657 -53359631 + Charlie1b DNA MER1_type 1 202 -321 1033 188 107 7 chr10 92229725 92230033 -53359255 + Charlie1b DNA MER1_type 184 522 -1 256 306 82 34 chr10 92230512 92230769 -53358519 - L2 LINE L2 -49 3223 2896 367 289 13 34 chr10 92230796 92230945 -53358343 + (TATG)n Simple_repeat Simple_repeat 2 147 0 512 326 0 6 chr10 92230967 92231198 -53358090 + (TG)n Simple_repeat Simple_repeat 1 229 0 301 333 160 7 chr10 92231271 92231421 -53357867 - MIR SINE MIR -39 223 51 324 310 43 26 chr10 92232215 92232390 -53356898 - MIR SINE MIR -37 171 2 2411 87 3 3 chr10 92235235 92235546 -53353742 - AluY SINE Alu 0 311 1 2630 62 0 0 chr10 92236809 92237118 -53352170 - AluY SINE Alu -2 309 1 5541 181 49 50 chr10 92338178 92338776 -53250512 + LTR56-int LTR ERV1 4410 5007 -116 9097 108 13 0 chr10 92338776 92340046 -53249242 + HSMAR1 DNA Mariner 1 1286 -1 5541 181 49 50 chr10 92340046 92340793 -53248495 + LTR56-int LTR ERV1 5007 4359 -764 2313 93 0 0 chr10 92340793 92341095 -53248193 + AluSg SINE Alu 1 302 -8 5541 181 49 50 chr10 92341095 92341776 -53247512 + LTR56-int LTR ERV1 4358 5038 -85 565 102 10 41 chr10 92341869 92341967 -53247321 - AluY SINE Alu -8 303 209 1242 225 39 41 chr10 92341968 92342293 -53246995 + LTR56 LTR ERV1 11 336 -109 2122 120 13 0 chr10 92342293 92342594 -53246694 + AluSc SINE Alu 1 305 -4 1242 225 39 41 chr10 92342594 92342704 -53246584 + LTR56 LTR ERV1 336 445 0 21 71 0 0 chr10 92342802 92342844 -53246444 + AT_rich Low_complexity Low_complexity 1 42 0 208 184 0 20 chr10 92343001 92343050 -53246238 + T-rich Low_complexity Low_complexity 3 50 0 30 0 0 0 chr10 92343731 92343761 -53245527 + AT_rich Low_complexity Low_complexity 1 30 0 240 259 0 0 chr10 92345131 92345185 -53244103 + MLT1J2 LTR MaLR 49 102 -348 2389 72 0 3 chr10 92345870 92346162 -53243126 - AluY SINE Alu -20 291 1 212 184 0 0 chr10 92347905 92347943 -53241345 + T-rich Low_complexity Low_complexity 1 38 0 2080 146 12 12 chr10 92347961 92348304 -53240984 - MER2 DNA MER2_type -1 343 1 2578 11 3 0 chr10 92348753 92349069 -53240219 - AluYb8 SINE Alu 0 317 1 725 285 102 25 chr10 92349655 92350059 -53239229 + L1M4 LINE L1 3725 4159 -1987 2221 99 0 0 chr10 92350296 92350602 -53238686 + AluY SINE Alu 1 306 0 1103 289 96 56 chr10 92351037 92352279 -53237009 - L1ME LINE L1 -4774 1306 10 2119 86 7 0 chr10 92354126 92354406 -53234882 + AluY SINE Alu 20 301 -10 404 133 0 0 chr10 92354410 92354470 -53234818 - AluS SINE Alu -240 60 1 1552 199 43 0 chr10 92354515 92354796 -53234492 - AluJo SINE Alu -19 293 1 513 230 100 74 chr10 92354836 92355066 -53234222 + L2 LINE L2 3077 3312 -1 367 364 53 6 chr10 92355801 92355981 -53233307 - MIR SINE MIR -65 143 5 525 310 63 24 chr10 92356218 92356550 -53232738 - MLT1K LTR MaLR -8 580 236 311 277 99 21 chr10 92356843 92356984 -53232304 + MIR SINE MIR 111 262 0 245 50 0 50 chr10 92357280 92357320 -53231968 + (GAAAA)n Simple_repeat Simple_repeat 3 40 0 418 246 24 42 chr10 92357364 92357531 -53231757 + GA-rich Low_complexity Low_complexity 4 167 0 2693 165 73 21 chr10 92357536 92358220 -53231068 + L1MCa LINE L1 1806 2528 -3898 3301 241 55 6 chr10 92358285 92359381 -53229907 + L1MCa LINE L1 2522 3670 -2756 1731 227 27 15 chr10 92359391 92360191 -53229097 - L1MC/D LINE L1 -743 5403 4790 3234 133 6 4 chr10 92362613 92363109 -53226179 - LOR1a LTR ERV1 0 497 1 218 264 11 46 chr10 92364847 92364934 -53224354 - L2 LINE L2 0 3272 3189 333 185 87 35 chr10 92364951 92365124 -53224164 + L1M4 LINE L1 3117 3298 -2848 600 263 38 49 chr10 92365201 92365467 -53223821 + L1ME LINE L1 5376 5638 -528 1041 212 119 99 chr10 92365483 92365937 -53223351 + MLT2B1 LTR ERVL 5 449 -71 186 43 0 0 chr10 92365937 92365960 -53223328 + (TC)n Simple_repeat Simple_repeat 2 24 0 342 67 0 0 chr10 92365969 92366014 -53223274 + (CA)n Simple_repeat Simple_repeat 1 45 0 1041 212 119 99 chr10 92366014 92366054 -53223234 + MLT2B1 LTR ERVL 456 519 -1 222 62 0 0 chr10 92366239 92366271 -53223017 + (A)n Simple_repeat Simple_repeat 1 32 0 396 59 0 0 chr10 92366415 92366466 -53222822 + (CA)n Simple_repeat Simple_repeat 2 52 0 26 0 0 0 chr10 92366522 92366548 -53222740 + AT_rich Low_complexity Low_complexity 1 26 0 367 304 49 46 chr10 92366708 92366971 -53222317 - L3 LINE CR1 -3 1574 1311 22 0 0 0 chr10 92367506 92367528 -53221760 + AT_rich Low_complexity Low_complexity 1 22 0 507 17 0 0 chr10 92367889 92367949 -53221339 + (CA)n Simple_repeat Simple_repeat 1 60 0 505 229 19 38 chr10 92368088 92368245 -53221043 - Charlie4a DNA MER1_type 0 508 355 1315 239 141 9 chr10 92368255 92368354 -53220934 - L1ME1 LINE L1 -33 6133 6048 2202 46 25 0 chr10 92368354 92368637 -53220651 + L1PA5 LINE L1 5861 6150 -4 1315 239 141 9 chr10 92368637 92368998 -53220290 - L1ME1 LINE L1 -118 6048 5612 21 0 0 0 chr10 92369182 92369203 -53220085 + AT_rich Low_complexity Low_complexity 1 21 0 215 299 45 0 chr10 92369496 92369563 -53219725 + MIR SINE MIR 58 127 -81 291 348 70 25 chr10 92369563 92369721 -53219567 - MER96 DNA MER1_type? 0 175 11 435 211 58 26 chr10 92370231 92370387 -53218901 - Charlie4a DNA MER1_type -145 363 203 1339 246 13 26 chr10 92370402 92370788 -53218500 - L1ME1 LINE L1 -2168 5640 5260 22 0 0 0 chr10 92371196 92371218 -53218070 + AT_rich Low_complexity Low_complexity 1 22 0 1833 244 23 26 chr10 92371312 92372224 -53217064 + L1MD2 LINE L1 4688 5591 -749 1553 202 79 57 chr10 92372243 92372713 -53216575 + MLT1D LTR MaLR 24 503 -2 1574 194 30 53 chr10 92372912 92373516 -53215772 + L1MD2 LINE L1 5668 6227 -15 321 317 85 42 chr10 92373569 92373828 -53215460 + L1MC5 LINE L1 5081 5350 -796 1554 286 31 29 chr10 92373829 92374447 -53214841 + L1MC5 LINE L1 5328 5946 -1862 198 0 0 0 chr10 92374455 92374477 -53214811 + (TG)n Simple_repeat Simple_repeat 1 22 0 207 0 0 0 chr10 92374918 92374941 -53214347 + (TG)n Simple_repeat Simple_repeat 2 24 0 688 248 35 90 chr10 92374941 92375284 -53214004 + L1MC5 LINE L1 6625 6948 -1013 1143 222 65 68 chr10 92375391 92376004 -53213284 + L1MC5 LINE L1 7014 7624 -337 1742 172 24 11 chr10 92376024 92376396 -53212892 - L1MA6 LINE L1 -1 6885 6509 3202 197 50 7 chr10 92376397 92377098 -53212190 - L1MA6 LINE L1 -988 5744 5014 6671 218 18 31 chr10 92377149 92378900 -53210388 - L1MA6 LINE L1 -2042 4690 2962 6255 15 0 1 chr10 92379003 92379720 -53209568 - L1PA3 LINE L1 -81 6074 5359 4033 253 63 23 chr10 92379721 92381602 -53207686 - L1MA6 LINE L1 -3891 2841 1201 4737 288 22 17 chr10 92381710 92382988 -53206300 - L1MA6 LINE L1 -5441 1212 2 318 338 45 23 chr10 92382969 92383235 -53206053 - L1M3d LINE L1 -5619 272 1 * 308 282 167 33 chr10 92383360 92383690 -53205598 + L1M4 LINE L1 3729 4102 -2044 369 303 43 0 chr10 92383749 92383911 -53205377 - MER112 DNA MER1_type -89 171 3 258 280 76 34 chr10 92384738 92384856 -53204432 - L2 LINE L2 -1 3271 3149 494 269 156 6 chr10 92384920 92385080 -53204208 - MER5A DNA MER1_type -2 187 4 893 240 8 58 chr10 92385685 92385943 -53203345 - L1MB5 LINE L1 -7 6665 6421 1379 235 11 50 chr10 92385943 92386321 -53202967 + MLT1A2 LTR MaLR 1 363 -11 1949 196 26 33 chr10 92386333 92386786 -53202502 - L1MB5 LINE L1 -247 6425 5976 30678 114 13 57 chr10 92386813 92393247 -53196041 + L1PA7 LINE L1 12 6154 0 2527 224 32 31 chr10 92393332 92394121 -53195167 - L1MB5 LINE L1 -712 5970 5184 246 128 0 0 chr10 92394145 92394184 -53195104 + (GAAA)n Simple_repeat Simple_repeat 4 42 0 286 217 19 0 chr10 92394185 92394259 -53195029 - L1MB5 LINE L1 -1527 5117 5042 2389 290 62 28 chr10 92394286 92394896 -53194392 - L1MB5 LINE L1 -3361 3283 2696 653 254 0 0 chr10 92394896 92395036 -53194252 + FLAM_A SINE Alu 2 141 0 2389 290 62 28 chr10 92395036 92397317 -53191971 - L1MB5 LINE L1 -3948 2696 8 195 378 54 18 chr10 92397738 92397849 -53191439 - L2 LINE L2 -3 3269 3155 2173 191 39 5 chr10 92397891 92398299 -53190989 + MSTB LTR MaLR 1 422 -4 8933 158 37 11 chr10 92398299 92399842 -53189446 + Tigger1 DNA MER2_type 3 1585 -833 568 184 19 10 chr10 92399945 92400048 -53189240 + Tigger1 DNA MER2_type 2106 2209 -209 677 178 39 8 chr10 92400048 92400177 -53189111 - FLAM_C SINE Alu -10 133 1 1051 171 88 0 chr10 92400177 92400382 -53188906 + Tigger1 DNA MER2_type 2196 2418 0 2211 190 43 7 chr10 92400779 92401194 -53188094 + MSTB1 LTR MaLR 1 430 -2 484 294 48 30 chr10 92401258 92401489 -53187799 + L1MEc LINE L1 150 384 -6012 2229 213 69 22 chr10 92401817 92402394 -53186894 + L1MB7 LINE L1 5576 6179 -5 183 42 0 0 chr10 92402678 92402702 -53186586 + (TG)n Simple_repeat Simple_repeat 2 25 0 545 231 25 55 chr10 92402801 92403000 -53186288 - L1MC5 LINE L1 -6 7955 7763 26 30 0 0 chr10 92403174 92403207 -53186081 + AT_rich Low_complexity Low_complexity 1 33 0 244 320 13 0 chr10 92403363 92403438 -53185850 - L2 LINE L2 0 3313 3238 556 269 17 71 chr10 92403449 92403687 -53185601 - MLT1K LTR MaLR 0 588 364 210 162 0 0 chr10 92403922 92403959 -53185329 + T-rich Low_complexity Low_complexity 1 37 0 2268 125 0 0 chr10 92404416 92404721 -53184567 - AluSq SINE Alu -8 305 1 346 294 44 50 chr10 92404755 92404915 -53184373 + MIR SINE MIR 90 248 -14 334 337 72 11 chr10 92405197 92405378 -53183910 - MIR SINE MIR -7 255 64 360 315 47 8 chr10 92406484 92406611 -53182677 - MIR SINE MIR -108 154 23 378 283 137 40 chr10 92407321 92407547 -53181741 + L3 LINE CR1 1244 1491 -86 969 189 50 0 chr10 92408271 92408451 -53180837 - MER5A DNA MER1_type 0 189 1 226 319 30 4 chr10 92408776 92408882 -53180406 + MIR SINE MIR 35 144 -64 1525 207 100 2 chr10 92408952 92409368 -53179920 - MLT2B2 LTR ERVL -13 507 1 259 238 140 104 chr10 92409379 92409572 -53179716 - L2 LINE L2 -93 3220 3021 206 239 65 65 chr10 92410151 92410243 -53179045 + MIR SINE MIR 121 212 -50 183 156 0 0 chr10 92411120 92411152 -53178136 + (TG)n Simple_repeat Simple_repeat 1 32 0 310 306 226 0 chr10 92411690 92411814 -53177474 - L2 LINE L2 -3 3269 3118 384 208 0 0 chr10 92412005 92412082 -53177206 - MIR SINE MIR -122 140 64 352 317 173 14 chr10 92413330 92413538 -53175750 - MIR SINE MIR -14 248 8 253 233 70 35 chr10 92413554 92413640 -53175648 - MER103 DNA DNA -45 121 33 202 222 0 0 chr10 92413744 92413789 -53175499 + (ATG)n Simple_repeat Simple_repeat 3 47 0 577 288 65 16 chr10 92413801 92413983 -53175305 - MIR SINE MIR -48 214 30 377 330 82 16 chr10 92414718 92414912 -53174376 - MIR SINE MIR -51 211 5 1768 189 3 0 chr10 92414998 92415289 -53173999 - AluJo SINE Alu -20 292 1 217 374 6 18 chr10 92415937 92416100 -53173188 + MIR SINE MIR 23 183 -79 461 208 0 10 chr10 92416837 92416932 -53172356 + MLT1A1 LTR MaLR 1 94 -271 1326 192 20 99 chr10 92416932 92417286 -53172002 + MLT1A1 LTR MaLR 2 327 -38 1382 208 30 0 chr10 92417310 92417575 -53171713 + MLT1A1 LTR MaLR 93 365 0 441 149 14 0 chr10 92417649 92417723 -53171565 + MLT1A1 LTR MaLR 291 365 0 269 356 86 6 chr10 92418496 92418670 -53170618 + MIR SINE MIR 19 206 -56 441 202 54 39 chr10 92418900 92419029 -53170259 - MER53 DNA DNA -57 132 2 768 273 171 40 chr10 92419820 92420271 -53169017 - MLT1G1 LTR MaLR -44 523 14 1825 164 0 0 chr10 92420678 92421019 -53168269 - AluJb SINE Alu 0 341 1 1902 249 56 41 chr10 92421103 92421714 -53167574 + MER74B LTR ERVL 3 622 0 2294 113 0 0 chr10 92421744 92422054 -53167234 + AluSg SINE Alu 1 310 0 1272 271 79 14 chr10 92422143 92422575 -53166713 - MLT2E LTR ERVL -2 626 167 227 279 29 0 chr10 92422818 92422886 -53166402 + CT-rich Low_complexity Low_complexity 3 72 0 501 229 19 6 chr10 92424113 92424270 -53165018 + CT-rich Low_complexity Low_complexity 2 160 0 236 394 15 0 chr10 92424593 92424730 -53164558 + L3 LINE CR1 1020 1158 -419 192 263 35 35 chr10 92424860 92424917 -53164371 + L3 LINE CR1 1287 1343 -234 305 298 98 6 chr10 92427110 92427262 -53162026 - MIR SINE MIR -64 144 28 247 245 198 9 chr10 92427565 92427671 -53161617 + MIR SINE MIR 105 230 -32 4127 178 14 96 chr10 92427823 92428031 -53161257 - LTR49-int LTR ERV1 -2333 3753 3529 2034 141 7 0 chr10 92428031 92428322 -53160966 - AluSg SINE Alu -17 293 1 4127 178 14 96 chr10 92428322 92428414 -53160874 - LTR49-int LTR ERV1 -2557 3529 3431 1960 148 20 0 chr10 92428414 92428719 -53160569 - AluSq SINE Alu -2 311 1 4127 178 14 96 chr10 92428719 92429733 -53159555 - LTR49-int LTR ERV1 -2655 3431 2558 1347 230 37 50 chr10 92429724 92430180 -53159108 - LTR49-int LTR ERV1 -4510 1821 1372 * 1502 131 14 5 chr10 92430296 92430518 -53158770 - MER30 DNA MER1_type -5 225 2 404 304 146 16 chr10 92430589 92430842 -53158446 - MER34B LTR ERV1 -275 290 5 1597 196 14 7 chr10 92430922 92431218 -53158070 - AluJb SINE Alu -12 300 3 322 297 77 19 chr10 92431857 92432012 -53157276 - MIR SINE MIR -51 211 48 987 224 169 69 chr10 92433755 92434259 -53155029 - LTR1B LTR ERV1 -235 591 38 312 316 35 0 chr10 92435975 92436089 -53153199 + MIR SINE MIR 60 177 -85 22 35 0 0 chr10 92436590 92436619 -53152669 + AT_rich Low_complexity Low_complexity 1 29 0 1644 138 63 22 chr10 92436645 92436914 -53152374 - AluJo SINE Alu -32 280 1 223 355 74 26 chr10 92437156 92437387 -53151901 + L2 LINE L2 2825 3066 -206 646 268 17 47 chr10 92437614 92437849 -53151439 + MIR SINE MIR 21 248 -14 2636 84 48 25 chr10 92438828 92439183 -53150105 - THE1B LTR MaLR -1 363 1 1699 196 112 12 chr10 92439188 92439519 -53149769 - MLT1A1 LTR MaLR 0 365 2 541 289 97 26 chr10 92439725 92439953 -53149335 + MLT1J2 LTR MaLR 207 450 0 21 0 0 0 chr10 92440267 92440288 -53149000 + AT_rich Low_complexity Low_complexity 1 21 0 5492 129 256 66 chr10 92440760 92442197 -53147091 - pTR5 LTR ERV1 0 2438 375 1791 51 0 9 chr10 92442274 92442490 -53146798 - AluY SINE Alu -10 301 88 1868 114 62 0 chr10 92442918 92443190 -53146098 - AluSq SINE Alu -24 289 1 238 217 48 0 chr10 92443286 92443369 -53145919 + (TA)n Simple_repeat Simple_repeat 1 87 0 1269 221 77 20 chr10 92445159 92445512 -53143776 + L1ME3 LINE L1 5790 6162 0 495 319 52 5 chr10 92446434 92446625 -53142663 - MIR SINE MIR -43 219 20 233 175 0 0 chr10 92447850 92447890 -53141398 - MLT2D LTR ERVL -8 389 350 232 295 23 23 chr10 92447900 92448073 -53141215 + (TA)n Simple_repeat Simple_repeat 1 173 0 1538 204 33 12 chr10 92448133 92448467 -53140821 - MLT2D LTR ERVL -69 345 5 202 78 98 0 chr10 92448808 92448859 -53140429 + (TA)n Simple_repeat Simple_repeat 1 56 0 259 271 172 25 chr10 92450005 92450127 -53139161 + MIR SINE MIR 102 241 -21 1366 176 35 72 chr10 92451112 92451459 -53137829 - L1MA8 LINE L1 -10 6281 5948 23574 30 7 1 chr10 92451530 92454981 -53134307 - L1PA3 LINE L1 -2 6153 2686 197 231 0 39 chr10 92455412 92455464 -53133824 + MIR SINE MIR 85 134 -128 180 0 0 0 chr10 92456573 92456593 -53132695 + (CAG)n Simple_repeat Simple_repeat 2 21 0 181 195 73 0 chr10 92456788 92456829 -53132459 + L2 LINE L2 2959 3002 -311 997 131 125 0 chr10 92456829 92456997 -53132291 - AluSg/x SINE Alu -2 310 122 358 284 10 0 chr10 92457811 92457913 -53131375 - L2 LINE L2 -50 3263 3161 817 249 100 74 chr10 92458022 92458452 -53130836 + LTR16A1 LTR ERVL 17 457 0 591 280 109 22 chr10 92458452 92458813 -53130475 - L2 LINE L2 -255 3058 2616 235 352 104 11 chr10 92458832 92459014 -53130274 - MIR SINE MIR -7 255 57 494 290 105 5 chr10 92459999 92460199 -53129089 - MIR SINE MIR -25 237 18 853 133 11 22 chr10 92461070 92461250 -53128038 + CT-rich Low_complexity Low_complexity 3 180 0 373 258 86 20 chr10 92461751 92461902 -53127386 - MIR SINE MIR 0 262 102 253 328 35 17 chr10 92462081 92462197 -53127091 - MIR SINE MIR -32 230 113 309 317 222 16 chr10 92462235 92462614 -53126674 - L2 LINE L2 0 3313 2857 2311 97 0 7 chr10 92463947 92464246 -53125042 - AluY SINE Alu -14 297 1 810 277 28 32 chr10 92464856 92465109 -53124179 + MIR SINE MIR 10 261 -1 249 306 0 0 chr10 92465313 92465375 -53123913 - L2 LINE L2 -1 3271 3210 1861 167 83 6 chr10 92465497 92465845 -53123443 + MSTA LTR MaLR 54 428 0 1085 242 91 24 chr10 92469025 92469355 -53119933 + L1MC4 LINE L1 7326 7677 -365 2594 108 24 14 chr10 92469420 92469791 -53119497 - THE1C LTR MaLR 0 375 1 334 172 0 0 chr10 92469941 92469999 -53119289 - L1PA16 LINE L1 -11 7593 7536 13586 220 29 30 chr10 92470000 92471848 -53117440 - L1PA16 LINE L1 -105 7499 5650 2751 104 0 0 chr10 92471848 92472203 -53117085 - THE1A LTR MaLR 0 355 1 11669 98 17 33 chr10 92472203 92473808 -53115480 - THE1A-int LTR MaLR 0 1580 1 2861 91 6 0 chr10 92473808 92474161 -53115127 - THE1A LTR MaLR 0 355 1 13586 220 29 30 chr10 92474161 92477544 -53111744 - L1PA16 LINE L1 -1951 5653 2256 303 317 0 10 chr10 92477849 92477950 -53111338 - L1PA16 LINE L1 -5398 2183 2084 600 386 36 28 chr10 92478089 92478669 -53110619 - L1PA16 LINE L1 -6201 1373 789 1799 231 9 14 chr10 92478681 92478778 -53110510 - L1MC4 LINE L1 -260 7782 7686 1193 192 77 0 chr10 92478778 92478986 -53110302 + MER58A DNA MER1_type 1 224 0 1799 231 9 14 chr10 92478986 92479330 -53109958 - L1MC4 LINE L1 -356 7686 7343 594 301 117 9 chr10 92479336 92479661 -53109627 + L1MC4 LINE L1 7676 8035 -7 1656 71 28 0 chr10 92479686 92479898 -53109390 + LTR9 LTR ERV1 1 218 -394 * 1733 166 3 14 chr10 92479895 92480179 -53109109 + LTR9 LTR ERV1 332 612 0 365 338 76 50 chr10 92481353 92481811 -53107477 + L1ME LINE L1 2983 3452 -2694 2217 123 150 5 chr10 92482459 92482832 -53106456 + MSTA LTR MaLR 1 427 -1 241 288 40 40 chr10 92482890 92483088 -53106200 + L1ME LINE L1 5619 5816 -305 609 306 98 39 chr10 92483437 92483823 -53105465 - L2 LINE L2 -31 3282 2874 2975 9 0 0 chr10 92484143 92484461 -53104827 - AluYb8 SINE Alu 0 318 1 268 300 199 25 chr10 92484461 92484730 -53104558 + L3 LINE CR1 1084 1404 -173 640 286 208 40 chr10 92484807 92485258 -53104030 + L2 LINE L2 2367 2893 -421 349 269 65 9 chr10 92485350 92485458 -53103830 + L2 LINE L2 3157 3270 -2 204 222 62 49 chr10 92487907 92487988 -53101300 + MIR SINE MIR 133 214 -48 241 310 62 8 chr10 92489066 92489195 -53100093 - MIR SINE MIR -19 243 108 470 226 96 0 chr10 92489424 92489539 -53099749 - MER5A DNA MER1_type 0 189 64 1540 233 72 14 chr10 92489540 92489980 -53099308 - L1MB7 LINE L1 -2 6168 5698 658 278 35 12 chr10 92490019 92490188 -53099100 - MER5B DNA MER1_type 0 178 6 388 224 82 41 chr10 92490204 92490376 -53098912 + MER5A DNA MER1_type 4 183 -6 419 205 35 18 chr10 92491904 92492075 -53097213 + CT-rich Low_complexity Low_complexity 1 174 0 454 189 83 45 chr10 92492160 92492292 -53096996 - MIR SINE MIR -65 197 61 21 36 0 0 chr10 92492921 92492949 -53096339 + AT_rich Low_complexity Low_complexity 1 28 0 389 284 93 27 chr10 92493427 92493610 -53095678 - MIR SINE MIR -1 261 67 222 62 0 0 chr10 92493930 92493962 -53095326 + (TG)n Simple_repeat Simple_repeat 2 33 0 180 77 0 0 chr10 92493985 92494011 -53095277 + (GA)n Simple_repeat Simple_repeat 1 26 0 21 36 0 0 chr10 92494064 92494092 -53095196 + AT_rich Low_complexity Low_complexity 1 28 0 1636 171 4 4 chr10 92495046 92495309 -53093979 + AluJo SINE Alu 5 267 -45 257 396 87 3 chr10 92495315 92495613 -53093675 - LTR16A LTR ERVL -127 323 1 326 268 41 21 chr10 92495620 92495717 -53093571 - MIR SINE MIR -161 101 3 294 259 12 59 chr10 92498610 92498695 -53090593 - MIR SINE MIR -94 114 34 204 163 0 0 chr10 92500358 92500401 -53088887 + (TG)n Simple_repeat Simple_repeat 2 44 0 4346 74 0 0 chr10 92500779 92501333 -53087955 + MER41A LTR ERV1 1 554 0 13428 128 73 43 chr10 92501384 92505150 -53084138 + MER41A-int LTR ERV1 1 3501 -1514 19704 51 0 3 chr10 92505253 92507834 -53081454 - L1P LINE L1 -3564 2582 9 314 330 116 0 chr10 92508001 92508113 -53081175 - MIR SINE MIR -117 145 21 848 173 89 65 chr10 92509309 92509523 -53079765 + MER20 DNA MER1_type 1 219 0 22 0 0 0 chr10 92510075 92510097 -53079191 + AT_rich Low_complexity Low_complexity 1 22 0 216 314 78 0 chr10 92510200 92510302 -53078986 - MIR SINE MIR -52 210 101 200 69 0 0 chr10 92510753 92510782 -53078506 - L2 LINE L2 0 3313 3285 474 306 66 22 chr10 92510809 92510992 -53078296 + MIR SINE MIR 7 197 -65 1478 202 9 47 chr10 92511085 92511402 -53077886 - AluJb SINE Alu -7 305 1 595 272 74 37 chr10 92511443 92511686 -53077602 - MIR SINE MIR -10 252 1 364 241 83 83 chr10 92513050 92513093 -53076195 + MER39 LTR ERV1 1 43 -664 1656 136 0 0 chr10 92513093 92513329 -53075959 + AluSg/x SINE Alu 72 307 -5 364 241 83 83 chr10 92513329 92513418 -53075870 + MER39 LTR ERV1 42 133 -574 * 1546 228 38 24 chr10 92513385 92513836 -53075452 + MER39 LTR ERV1 250 706 -1 472 200 110 10 chr10 92513916 92514016 -53075272 - FLAM_C SINE Alu -31 112 3 24 0 0 0 chr10 92514466 92514490 -53074798 + AT_rich Low_complexity Low_complexity 1 24 0 753 313 89 47 chr10 92514907 92515435 -53073853 + L1MEd LINE L1 598 1147 -4972 619 202 82 144 chr10 92515464 92515825 -53073463 + L1ME1 LINE L1 4749 5078 -1068 2075 174 29 74 chr10 92515825 92516312 -53072976 + MLT1C LTR MaLR 1 465 -2 619 202 82 144 chr10 92516312 92516401 -53072887 + L1ME1 LINE L1 5078 5171 -975 1703 113 4 0 chr10 92516403 92516633 -53072655 + AluSc SINE Alu 3 233 -76 1043 233 58 62 chr10 92516633 92517097 -53072191 + L1ME1 LINE L1 5655 6116 -50 41 21 0 0 chr10 92517597 92517645 -53071643 + AT_rich Low_complexity Low_complexity 1 48 0 2228 121 0 0 chr10 92519016 92519322 -53069966 - AluSq SINE Alu -7 306 1 449 333 102 27 chr10 92519384 92519825 -53069463 - L2 LINE L2 -656 2658 2185 596 345 55 13 chr10 92519850 92520085 -53069203 - MIR SINE MIR -16 246 2 198 442 0 0 chr10 92524300 92524395 -53064893 - L2 LINE L2 -9 3304 3210 269 252 50 43 chr10 92524673 92524812 -53064476 + L1ME LINE L1 5522 5661 -460 199 368 105 53 chr10 92525746 92525879 -53063409 - L2 LINE L2 -61 3211 3072 867 273 158 5 chr10 92527718 92528099 -53061189 + L2 LINE L2 1962 2400 -914 910 88 0 0 chr10 92528103 92528263 -53061025 + AluY SINE Alu 177 336 0 376 337 12 6 chr10 92528314 92528480 -53060808 + MLT1I LTR MaLR 228 394 -15 244 236 18 0 chr10 92529129 92529184 -53060104 + (TG)n Simple_repeat Simple_repeat 2 57 0 1783 78 4 4 chr10 92531825 92532069 -53057219 - L1PA7 LINE L1 0 6154 5911 303 309 0 0 chr10 92532125 92532206 -53057082 + GA-rich Low_complexity Low_complexity 3 83 0 277 335 131 27 chr10 92533104 92533325 -53055963 + L2 LINE L2 2697 2940 -374 234 234 47 0 chr10 92534332 92534396 -53054892 + MIR SINE MIR 126 192 -70 25 31 0 0 chr10 92534810 92534842 -53054446 + AT_rich Low_complexity Low_complexity 1 32 0 695 79 0 44 chr10 92534859 92534973 -53054315 - L1PA13 LINE L1 0 6163 6055 345 143 130 0 chr10 92535328 92535405 -53053883 + MLT1H1 LTR MaLR 1 87 -508 681 269 103 49 chr10 92535572 92535981 -53053307 + MLT1H1 LTR MaLR 125 555 0 2753 7 0 0 chr10 92536314 92536611 -53052677 + AluY SINE Alu 13 309 -2 3026 186 46 42 chr10 92537556 92538296 -53050992 - L1 LINE L1 -1703 4679 3934 2292 101 0 0 chr10 92538296 92538592 -53050696 - AluSq SINE Alu -17 296 1 3026 186 46 42 chr10 92538592 92538679 -53050609 - L1 LINE L1 -2448 3934 3849 4232 184 36 19 chr10 92538679 92540480 -53048808 + L1MA7 LINE L1 4459 6290 -1 225 250 0 0 chr10 92541953 92542005 -53047283 - MLT1H LTR MaLR -6 543 492 3447 213 32 33 chr10 92542011 92542765 -53046523 + L1MB1 LINE L1 4536 5289 -900 189 0 0 0 chr10 92542765 92542786 -53046502 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 3447 213 32 33 chr10 92542786 92543653 -53045635 + L1MB1 LINE L1 5289 6157 -32 21 57 0 0 chr10 92543653 92543688 -53045600 + AT_rich Low_complexity Low_complexity 1 35 0 694 265 27 55 chr10 92543751 92544466 -53044822 - L1M4c LINE L1 -3652 2992 2289 873 243 34 50 chr10 92544583 92544961 -53044327 - L1M4c LINE L1 -4651 1995 1624 2471 103 37 28 chr10 92544961 92545441 -53043847 + MLT2A1 LTR ERVL 1 453 0 4714 248 45 32 chr10 92545452 92547039 -53042249 - L1M4c LINE L1 -4924 1618 11 448 339 152 31 chr10 92547076 92547524 -53041764 + L2 LINE L2 2808 3309 -4 318 323 97 4 chr10 92547843 92548100 -53041188 + L1ME LINE L1 5546 5826 -295 23 0 0 0 chr10 92548552 92548575 -53040713 + AT_rich Low_complexity Low_complexity 1 23 0 1783 157 0 42 chr10 92550555 92550868 -53038420 + AluJb SINE Alu 1 300 -12 2287 182 48 15 chr10 92551194 92551734 -53037554 - L1MC3 LINE L1 -24 7761 7100 1860 187 3 3 chr10 92551735 92552067 -53037221 - MER7A DNA MER2_type -16 330 1 1699 180 18 60 chr10 92552093 92552476 -53036812 - L1MC3 LINE L1 -775 7010 6644 1015 211 64 48 chr10 92552476 92552788 -53036500 + MER2 DNA MER2_type 1 317 -28 5811 211 32 9 chr10 92552790 92553191 -53036097 - L1MC3 LINE L1 -743 5403 6144 2039 149 3 0 chr10 92553191 92553493 -53035795 + AluSx SINE Alu 1 303 -9 5811 211 32 9 chr10 92553493 92554637 -53034651 - L1MC3 LINE L1 -1 6145 5029 1216 216 93 29 chr10 92554744 92555054 -53034234 + MER58B DNA MER1_type 11 340 -1 323 217 78 54 chr10 92555071 92555200 -53034088 - L1ME3 LINE L1 -123 6039 5908 285 227 32 32 chr10 92555210 92555364 -53033924 + (TATATG)n Simple_repeat Simple_repeat 2 155 0 748 256 16 58 chr10 92555487 92555794 -53033494 - L1ME3 LINE L1 -331 5790 5493 28 0 0 0 chr10 92555966 92555994 -53033294 + AT_rich Low_complexity Low_complexity 1 28 0 11879 28 0 1 chr10 92556046 92558223 -53031065 - L1PA3 LINE L1 0 6155 3979 9251 39 15 0 chr10 92558223 92559390 -53029898 + L1PA3 LINE L1 2791 3974 -2172 348 268 3 12 chr10 92559435 92559569 -53029719 - L1ME3 LINE L1 -770 5472 5340 216 213 71 0 chr10 92559583 92559710 -53029578 + (TA)n Simple_repeat Simple_repeat 1 136 0 285 89 0 0 chr10 92559722 92559767 -53029521 + (TA)n Simple_repeat Simple_repeat 2 46 0 1348 262 93 25 chr10 92559783 92560588 -53028700 - L1ME3 LINE L1 -902 5244 4385 321 311 94 20 chr10 92560688 92560932 -53028356 - L1ME3 LINE L1 -1800 4346 4085 4387 216 27 28 chr10 92560959 92563053 -53026235 - L1MA10 LINE L1 -7 6509 4411 2994 186 27 7 chr10 92563054 92563641 -53025647 - Tigger1 DNA MER2_type -2 2416 1818 518 231 163 20 chr10 92563686 92563833 -53025455 + FRAM SINE Alu 8 175 -1 587 183 0 0 chr10 92563833 92563937 -53025351 - Tigger1 DNA MER2_type -587 1831 1728 850 79 0 0 chr10 92563941 92564055 -53025233 + L1PA6 LINE L1 5798 5911 -243 9795 160 23 11 chr10 92564055 92565762 -53023526 - Tigger1 DNA MER2_type -690 1728 1 6359 243 55 40 chr10 92565767 92567633 -53021655 - L1MA10 LINE L1 -1920 4408 2474 772 108 85 15 chr10 92567633 92567763 -53021525 + MER85 DNA T2_type 1 139 0 6359 243 55 40 chr10 92567763 92569169 -53020119 - L1MA10 LINE L1 -3854 2474 1090 235 282 28 14 chr10 92569508 92569650 -53019638 - L1MDa LINE L1 -4859 1683 1540 316 278 169 36 chr10 92569663 92570097 -53019191 - L1MDa LINE L1 -5017 1617 1107 237 139 0 0 chr10 92570285 92570328 -53018960 + (TC)n Simple_repeat Simple_repeat 1 43 0 588 290 171 27 chr10 92570564 92570967 -53018321 - LTR33A LTR ERVL -2 521 61 189 171 0 0 chr10 92571294 92571329 -53017959 + (AATAG)n Simple_repeat Simple_repeat 1 35 0 477 155 108 1 chr10 92572913 92573023 -53016265 + L1MA8 LINE L1 6174 6289 -2 833 281 88 49 chr10 92573335 92573861 -53015427 - L1ME3 LINE L1 -327 5835 5290 1234 231 155 31 chr10 92575622 92576040 -53013248 + MLT2B2 LTR ERVL 1 482 -33 360 0 0 0 chr10 92576040 92576080 -53013208 + (CA)n Simple_repeat Simple_repeat 2 41 0 1234 231 155 31 chr10 92576080 92576119 -53013169 + MLT2B2 LTR ERVL 482 515 0 6383 129 19 27 chr10 92576993 92578073 -53011215 - MER11C LTR ERVK 0 1071 1 425 223 143 0 chr10 92578784 92578896 -53010392 - L2 LINE L2 -1 3312 3185 4781 169 23 8 chr10 92579888 92580713 -53008575 + MSTB-int LTR MaLR 815 1651 0 1994 182 38 19 chr10 92580713 92581131 -53008157 + MSTB LTR MaLR 1 426 0 6230 93 20 4 chr10 92581527 92582829 -53006459 - L1PA14 LINE L1 -3 6158 4842 226 65 0 0 chr10 92583371 92583402 -53005886 - L1MA9 LINE L1 -3 6309 6279 1123 306 117 13 chr10 92584322 92584953 -53004335 - Charlie7 DNA MER1_type -1915 697 1 218 330 11 11 chr10 92586464 92586552 -53002736 - MIR SINE MIR -11 251 164 1990 169 22 8 chr10 92588891 92589246 -53000042 + MLT1A1 LTR MaLR 6 365 0 237 170 64 0 chr10 92589478 92589525 -52999763 + (CATAT)n Simple_repeat Simple_repeat 5 54 0 810 184 21 32 chr10 92591766 92591956 -52997332 - L1MC3 LINE L1 -154 7631 7444 1235 177 4 40 chr10 92591984 92592261 -52997027 - L1MB3 LINE L1 -2 6181 5915 864 292 46 51 chr10 92592494 92593097 -52996191 + L1ME3A LINE L1 5347 5946 -224 2329 88 0 16 chr10 92593110 92593418 -52995870 - AluY SINE Alu -8 303 1 1332 165 0 0 chr10 92593480 92593686 -52995602 + MSTB LTR MaLR 2 207 -219 691 191 24 12 chr10 92593687 92593855 -52995433 + L1PA15 LINE L1 4730 4899 -1247 3768 111 17 7 chr10 92593855 92594424 -52994864 + L1PA15 LINE L1 5585 6165 0 1117 161 28 76 chr10 92594467 92594716 -52994572 + MSTB LTR MaLR 188 424 -2 812 278 33 49 chr10 92595090 92595525 -52993763 - LTR35 LTR ERV1 0 556 144 270 0 0 0 chr10 92595751 92595781 -52993507 + (TG)n Simple_repeat Simple_repeat 2 31 0 363 228 26 18 chr10 92595781 92595895 -52993393 - LTR35-int LTR ERV1 -648 7472 7358 4392 150 21 20 chr10 92596349 92597095 -52992193 - MER49 LTR ERV1 -163 760 14 1425 135 13 4 chr10 92597095 92597324 -52991964 - L1PA16 LINE L1 -2 6164 5934 343 85 0 0 chr10 92597324 92597371 -52991917 - MLT2A1 LTR ERVL -8 436 390 226 218 26 13 chr10 92597371 92597449 -52991839 + (TA)n Simple_repeat Simple_repeat 2 80 0 2930 72 41 3 chr10 92597449 92597838 -52991450 - MLT2A1 LTR ERVL -40 404 1 39361 85 16 7 chr10 92597838 92603433 -52985855 - HERVL-A1-A1 LTR ERVL 0 5654 1 2932 101 34 20 chr10 92603433 92603871 -52985417 - MLT2A1 LTR ERVL 0 444 1 4185 125 23 0 chr10 92603871 92604600 -52984688 - L1PA16 LINE L1 -221 5945 5204 1106 211 38 11 chr10 92604626 92604899 -52984389 - MER49-int LTR ERV1 -32 7064 6445 330 197 92 0 chr10 92604900 92604976 -52984312 - MER49-int LTR ERV1 -622 6136 6054 262 211 0 0 chr10 92604958 92605010 -52984278 - LTR35-int LTR ERV1 -4119 4001 3950 * 340 126 11 126 chr10 92605304 92605399 -52983889 - LTR35-int LTR ERV1 -4251 3869 3786 5428 175 58 80 chr10 92605534 92607892 -52981396 - LTR35-int LTR ERV1 -2129 4017 694 * 6151 163 19 36 chr10 92606963 92608285 -52981003 - LTR57-int LTR ERVL -3749 1594 296 1251 250 44 9 chr10 92608464 92608780 -52980508 - LTR35-int LTR ERV1 -1455 331 5 496 296 57 61 chr10 92608795 92609206 -52980082 - LTR35 LTR ERV1 -9 547 146 424 333 77 11 chr10 92610828 92611011 -52978277 + MIR SINE MIR 20 214 -48 369 0 0 0 chr10 92611071 92611112 -52978176 + (TG)n Simple_repeat Simple_repeat 2 42 0 264 30 0 0 chr10 92611853 92611886 -52977402 + (TTTG)n Simple_repeat Simple_repeat 1 33 0 22 0 0 0 chr10 92612481 92612503 -52976785 + AT_rich Low_complexity Low_complexity 1 22 0 21 57 0 0 chr10 92612540 92612575 -52976713 + AT_rich Low_complexity Low_complexity 1 35 0 198 0 0 0 chr10 92612667 92612689 -52976599 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 1967 114 62 0 chr10 92612692 92612964 -52976324 - AluSx SINE Alu -23 289 1 31 26 0 0 chr10 92612972 92613010 -52976278 + AT_rich Low_complexity Low_complexity 1 38 0 343 316 72 29 chr10 92613334 92613780 -52975508 - HAL1b LINE L1 -257 1091 627 2512 45 0 13 chr10 92614818 92615126 -52974162 + AluY SINE Alu 8 311 0 4223 195 38 10 chr10 92615269 92616550 -52972738 + L1MA7 LINE L1 4982 6291 0 359 301 113 74 chr10 92616566 92616998 -52972290 - L2 LINE L2 -527 2787 2339 548 227 98 108 chr10 92617943 92618160 -52971128 - MLT1B LTR MaLR 0 374 176 1393 116 31 9 chr10 92618160 92618385 -52970903 - L1PA13 LINE L1 0 6163 5934 548 227 98 108 chr10 92618385 92618448 -52970840 - MLT1B LTR MaLR -198 176 114 1920 116 6 69 chr10 92618906 92619224 -52970064 - AluSc SINE Alu -7 302 5 2176 104 3 31 chr10 92620082 92620399 -52968889 + AluSg SINE Alu 1 308 -2 245 29 29 0 chr10 92620438 92620472 -52968816 + (TAA)n Simple_repeat Simple_repeat 2 36 0 27 81 0 0 chr10 92623244 92623306 -52965982 + AT_rich Low_complexity Low_complexity 1 62 0 2308 114 0 0 chr10 92623894 92624202 -52965086 + AluSg SINE Alu 1 308 -2 257 189 38 0 chr10 92624886 92624939 -52964349 - L2 LINE L2 0 3313 3259 280 254 49 78 chr10 92624971 92625113 -52964175 + MIR SINE MIR 31 168 -94 202 189 21 32 chr10 92625239 92625334 -52963954 + (TA)n Simple_repeat Simple_repeat 2 95 0 219 36 0 0 chr10 92625436 92625464 -52963824 + (TG)n Simple_repeat Simple_repeat 1 28 0 2262 139 5 32 chr10 92626097 92626471 -52962817 + THE1B LTR MaLR 1 364 0 1730 228 56 32 chr10 92627023 92627967 -52961321 - L1MC/D LINE L1 -483 6153 5182 1960 249 65 9 chr10 92627982 92628720 -52960568 - L1MC/D LINE L1 -1758 4782 4004 932 261 61 0 chr10 92628738 92629098 -52960190 - L1MC/D LINE L1 -3208 3332 2951 1738 236 143 0 chr10 92629107 92629561 -52959727 - L1MC/D LINE L1 -6005 535 17 457 329 21 0 chr10 92632245 92632385 -52956903 + MIR3 SINE MIR 18 160 -48 414 308 54 44 chr10 92632427 92632742 -52956546 + MLT1H LTR MaLR 2 319 -230 307 219 0 0 chr10 92632811 92632875 -52956413 + MLT1G1 LTR MaLR 530 593 -2 260 276 24 31 chr10 92632933 92633060 -52956228 + MER103 DNA DNA 39 164 -2 230 71 0 24 chr10 92633646 92633688 -52955600 + (TG)n Simple_repeat Simple_repeat 1 41 0 439 346 75 9 chr10 92634473 92634687 -52954601 - MIR SINE MIR -33 229 2 410 287 84 6 chr10 92635496 92635663 -52953625 - MIR SINE MIR -8 254 75 24 53 0 0 chr10 92635737 92635775 -52953513 + AT_rich Low_complexity Low_complexity 1 38 0 197 313 0 12 chr10 92636554 92636634 -52952654 - L2 LINE L2 -72 3241 3163 374 299 22 22 chr10 92637197 92637331 -52951957 + MIR SINE MIR 95 228 -34 281 244 128 0 chr10 92637798 92637876 -52951412 + L2 LINE L2 3154 3241 -31 2157 165 21 21 chr10 92638094 92638513 -52950775 + MSTB LTR MaLR 1 419 -7 351 318 34 36 chr10 92639644 92640010 -52949278 + MLT1H1 LTR MaLR 182 551 -4 813 314 161 17 chr10 92640477 92641243 -52948045 - L2 LINE L2 0 3313 2421 367 290 60 16 chr10 92641717 92641900 -52947388 - Charlie8 DNA MER1_type -2152 265 75 312 91 0 0 chr10 92641912 92641956 -52947332 + (TC)n Simple_repeat Simple_repeat 2 45 0 864 281 77 0 chr10 92642350 92642635 -52946653 + LTR16C LTR ERVL 161 467 -24 445 358 0 0 chr10 92643440 92643563 -52945725 + L2 LINE L2 3150 3272 0 24 32 0 0 chr10 92643603 92643634 -52945654 + AT_rich Low_complexity Low_complexity 1 31 0 2300 118 0 3 chr10 92643683 92643996 -52945292 + AluSq SINE Alu 1 312 -1 560 270 13 6 chr10 92644279 92644438 -52944850 + MIR SINE MIR 100 259 -3 615 228 96 0 chr10 92644716 92644852 -52944436 + FAM SINE Alu 1 149 -36 368 123 43 21 chr10 92644854 92644991 -52944297 + GA-rich Low_complexity Low_complexity 1 139 0 1432 194 100 17 chr10 92646016 92646376 -52942912 - MLT1C LTR MaLR 0 467 78 1991 163 37 29 chr10 92646378 92646925 -52942363 + MLT2A2 LTR ERVL 3 554 0 425 141 51 0 chr10 92646925 92647003 -52942285 - MLT1C LTR MaLR -385 82 1 2128 119 0 28 chr10 92647080 92647398 -52941890 - AluSc SINE Alu 0 309 1 2233 203 32 20 chr10 92647543 92648040 -52941248 - MLT1D LTR MaLR 0 505 3 233 250 10 42 chr10 92648595 92648691 -52940597 + MLT1I LTR MaLR 82 174 -235 1925 129 0 0 chr10 92648973 92649244 -52940044 + AluSq SINE Alu 20 290 -23 25 65 0 0 chr10 92649322 92649368 -52939920 + AT_rich Low_complexity Low_complexity 1 46 0 1496 168 89 41 chr10 92649800 92650092 -52939196 - AluJb SINE Alu -4 308 3 1346 181 34 90 chr10 92650482 92650869 -52938419 - MLT1A1 LTR MaLR 0 365 1 230 288 117 81 chr10 92650992 92651078 -52938210 - L2 LINE L2 0 3313 3221 1916 147 10 16 chr10 92651078 92651385 -52937903 + AluSx SINE Alu 1 305 -7 230 288 117 81 chr10 92651385 92651409 -52937879 - L2 LINE L2 -92 3221 3199 278 348 92 35 chr10 92651603 92651744 -52937544 + MER5A DNA MER1_type 37 185 -4 30 0 0 0 chr10 92651826 92651856 -52937432 + AT_rich Low_complexity Low_complexity 1 30 0 6021 205 9 4 chr10 92652219 92653622 -52935666 - L1 LINE L1 -978 5168 3758 3723 89 35 18 chr10 92653622 92653829 -52935459 + L1PB2 LINE L1 5576 5778 -373 261 0 0 0 chr10 92653829 92653858 -52935430 + (TA)n Simple_repeat Simple_repeat 2 30 0 3723 89 35 18 chr10 92653858 92654213 -52935075 + L1PB2 LINE L1 5778 6149 -2 1379 87 69 13 chr10 92654220 92654451 -52934837 + L1MA3 LINE L1 6062 6305 0 338 202 61 0 chr10 92654456 92654555 -52934733 - MLT1I LTR MaLR -38 371 267 39007 69 2 3 chr10 92655471 92661620 -52927668 - L1PA5 LINE L1 -1 6153 11 230 301 6 62 chr10 92661643 92661819 -52927469 + L1MC/D LINE L1 3854 4019 -2127 306 322 155 28 chr10 92661844 92662303 -52926985 + L1MC/D LINE L1 4055 4571 -1575 25 0 0 0 chr10 92662680 92662705 -52926583 + AT_rich Low_complexity Low_complexity 1 25 0 35 83 0 0 chr10 92662851 92662935 -52926353 + AT_rich Low_complexity Low_complexity 1 84 0 654 314 105 36 chr10 92662935 92663431 -52925857 + L1MC/D LINE L1 5293 5822 -1986 289 271 110 19 chr10 92663564 92663719 -52925569 + L1ME LINE L1 5498 5666 -455 954 125 23 23 chr10 92663719 92663895 -52925393 + L1MA8 LINE L1 6111 6286 -5 25 0 0 0 chr10 92663895 92663920 -52925368 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr10 92665634 92665663 -52923625 + AT_rich Low_complexity Low_complexity 1 29 0 302 281 12 0 chr10 92665844 92665926 -52923362 - MIR3 SINE MIR -6 202 120 241 135 0 0 chr10 92666236 92666273 -52923015 + (TCCC)n Simple_repeat Simple_repeat 1 37 0 824 144 11 17 chr10 92666273 92666453 -52922835 + CT-rich Low_complexity Low_complexity 2 180 0 520 300 96 52 chr10 92668830 92669276 -52920012 + L1M4 LINE L1 4175 4640 -1506 894 185 0 0 chr10 92669434 92669591 -52919697 + L1MD1 LINE L1 88 244 -6296 * 6346 206 79 30 chr10 92669589 92671494 -52917794 + L1MD1 LINE L1 446 2443 -4097 3733 163 36 49 chr10 92671495 92671605 -52917683 + L1MD1 LINE L1 5766 5876 -760 2228 102 3 26 chr10 92671605 92671918 -52917370 + AluSp SINE Alu 2 307 -6 3733 163 36 49 chr10 92671918 92672689 -52916599 + L1MD1 LINE L1 5876 6636 0 487 307 97 38 chr10 92672851 92673477 -52915811 - L1MC/D LINE L1 -770 5376 4845 3145 173 45 5 chr10 92673477 92674074 -52915214 - LTR26E LTR ERV1 0 622 2 487 307 97 38 chr10 92674074 92674180 -52915108 - L1MC/D LINE L1 -1301 4845 4747 2003 112 31 21 chr10 92674518 92674805 -52914483 + AluSx SINE Alu 9 298 -14 346 224 53 0 chr10 92674826 92674902 -52914386 + MIR SINE MIR 174 253 -9 3536 207 23 21 chr10 92675220 92676018 -52913270 - MER21B LTR ERV1 -21 842 44 355 257 0 0 chr10 92676023 92676093 -52913195 - MER21B LTR ERV1 -775 88 19 221 340 7 21 chr10 92676418 92676559 -52912729 + GA-rich Low_complexity Low_complexity 3 141 0 551 246 125 35 chr10 92678031 92678419 -52910869 + MLT1F LTR MaLR 177 592 -3 335 220 0 64 chr10 92678708 92678817 -52910471 - MLT1K LTR MaLR -17 571 470 772 302 15 0 chr10 92678965 92679170 -52910118 + MIR SINE MIR 48 255 -7 287 261 15 0 chr10 92679174 92679239 -52910049 + (TAG)n Simple_repeat Simple_repeat 3 68 0 759 176 113 19 chr10 92683645 92683804 -52905484 + MER5B DNA MER1_type 1 174 -4 1633 231 143 21 chr10 92684490 92685048 -52904240 + MLT1E2 LTR MaLR 1 626 0 325 333 39 32 chr10 92685429 92685585 -52903703 - MIR SINE MIR -33 229 73 438 312 83 10 chr10 92685776 92685981 -52903307 - MIR SINE MIR -3 259 40 489 306 87 9 chr10 92688779 92689008 -52900280 + MLT1K LTR MaLR 336 582 -6 339 268 113 41 chr10 92689074 92689268 -52900020 + LTR50 LTR ERVL 2 209 -586 3168 126 50 6 chr10 92689930 92690476 -52898812 - LTR24B LTR ERV1 -6 570 1 785 278 46 10 chr10 92690590 92691100 -52898188 - MLT1G LTR MaLR -2 588 1 907 210 28 0 chr10 92693805 92693986 -52895302 - MER5A DNA MER1_type -1 188 3 518 354 31 4 chr10 92694557 92694786 -52894502 + MIR SINE MIR 3 237 -25 1061 348 46 24 chr10 92695809 92696392 -52892896 - L2 LINE L2 -609 2705 2110 337 224 206 0 chr10 92696639 92696746 -52892542 - Charlie1 DNA MER1_type 0 2761 2633 * 699 252 48 17 chr10 92696745 92696975 -52892313 - Charlie1 DNA MER1_type -2522 239 3 359 228 44 0 chr10 92697181 92697295 -52891993 - MER112 DNA MER1_type -1 259 141 208 196 0 22 chr10 92697305 92697351 -52891937 + (TA)n Simple_repeat Simple_repeat 2 46 0 381 330 97 39 chr10 92697416 92697674 -52891614 + L2 LINE L2 2609 2881 -433 594 256 75 10 chr10 92697812 92698011 -52891277 + MLT1J2 LTR MaLR 2 213 -237 740 318 19 37 chr10 92698449 92698773 -52890515 - L2 LINE L2 -496 2818 2501 685 304 73 27 chr10 92698776 92699105 -52890183 + L2 LINE L2 2970 3313 0 1861 124 53 0 chr10 92700006 92700123 -52889165 + AluSx SINE Alu 1 110 -202 207 0 0 0 chr10 92700123 92700146 -52889142 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1861 124 53 0 chr10 92700146 92700311 -52888977 + AluSx SINE Alu 110 298 -14 309 214 247 39 chr10 92700318 92700472 -52888816 - MIR SINE MIR -13 249 64 697 162 44 0 chr10 92700736 92700872 -52888416 - L1MB1 LINE L1 -57 6132 5991 816 159 6 35 chr10 92700898 92701068 -52888220 + L1MA10 LINE L1 6163 6327 -7 2867 147 32 11 chr10 92701426 92701949 -52887339 + Tigger1 DNA MER2_type 4 537 -1881 5078 137 40 7 chr10 92701953 92702406 -52886882 + Tigger1 DNA MER2_type 1504 1941 -477 2338 70 7 10 chr10 92702406 92702706 -52886582 + AluY SINE Alu 1 299 -12 5078 137 40 7 chr10 92702706 92703138 -52886150 + Tigger1 DNA MER2_type 1941 2418 0 22 0 0 0 chr10 92703159 92703181 -52886107 + AT_rich Low_complexity Low_complexity 1 22 0 519 288 99 13 chr10 92703491 92703724 -52885564 - MIR SINE MIR -1 261 9 233 284 0 12 chr10 92703785 92703866 -52885422 - L1ME LINE L1 -460 5661 5582 11229 89 24 3 chr10 92703995 92705618 -52883670 + MER41A-int LTR ERV1 4288 5944 -2 4222 85 0 0 chr10 92705618 92706172 -52883116 + MER41A LTR ERV1 1 554 0 834 170 59 0 chr10 92707073 92707226 -52882062 - FRAM SINE Alu -9 167 6 219 250 125 85 chr10 92709042 92709266 -52880022 + L2 LINE L2 3081 3313 0 2535 146 26 2 chr10 92709893 92710311 -52878977 - MSTA LTR MaLR 0 428 1 425 296 154 0 chr10 92710490 92710659 -52878629 - MIR SINE MIR -6 256 62 217 225 0 50 chr10 92710722 92710802 -52878486 + A-rich Low_complexity Low_complexity 2 77 0 2358 105 3 0 chr10 92711378 92711682 -52877606 - AluSp SINE Alu -8 305 1 206 189 0 19 chr10 92712021 92712074 -52877214 + CT-rich Low_complexity Low_complexity 4 55 0 330 213 100 60 chr10 92712256 92712406 -52876882 - HAL1 LINE L1 -1414 1093 938 2289 100 3 10 chr10 92713117 92713428 -52875860 - AluSc SINE Alu 0 309 1 481 260 0 0 chr10 92713762 92713858 -52875430 - MER5A DNA MER1_type -85 104 9 1633 212 210 21 chr10 92714168 92714820 -52874468 - LTR50 LTR ERVL -3 792 18 2854 129 2 16 chr10 92715226 92715659 -52873629 - MSTA LTR MaLR -1 427 1 272 48 24 0 chr10 92716380 92716422 -52872866 + (CA)n Simple_repeat Simple_repeat 2 44 0 401 307 15 36 chr10 92716783 92716920 -52872368 - MIR3 SINE MIR -61 147 14 1309 155 11 72 chr10 92717674 92717742 -52871546 - L1PA16 LINE L1 0 6166 6095 1551 210 0 27 chr10 92717742 92718037 -52871251 + AluJo SINE Alu 3 289 -23 1309 155 11 72 chr10 92718037 92718245 -52871043 - L1PA16 LINE L1 -71 6095 5907 2520 80 0 0 chr10 92718494 92718806 -52870482 - AluSx SINE Alu 0 312 1 494 223 60 82 chr10 92718941 92719125 -52870163 - MLT2B1 LTR ERVL 0 554 375 * 646 171 0 39 chr10 92719121 92719250 -52870038 + MSTC LTR MaLR 305 428 0 * 1316 176 48 45 chr10 92719250 92719555 -52869733 - MLT2B1 LTR ERVL -214 306 1 336 356 17 34 chr10 92719603 92719842 -52869446 - L1M4 LINE L1 -3227 2919 2685 260 328 16 5 chr10 92719982 92720171 -52869117 - L1M4 LINE L1 -3559 2587 2397 21 0 0 0 chr10 92720284 92720305 -52868983 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr10 92720656 92720682 -52868606 + AT_rich Low_complexity Low_complexity 1 26 0 12377 177 14 16 chr10 92721139 92723651 -52865637 - L1PA13 LINE L1 -4 6159 3657 2082 106 14 7 chr10 92723651 92723943 -52865345 - AluSg1 SINE Alu -14 295 2 12377 177 14 16 chr10 92723943 92724742 -52864546 - L1PA13 LINE L1 -2506 3657 2857 342 325 107 55 chr10 92724938 92725398 -52863890 - L1M4 LINE L1 -2720 3426 2922 1618 167 38 28 chr10 92725398 92725685 -52863603 - AluJb SINE Alu -12 300 11 342 325 107 55 chr10 92725685 92725861 -52863427 - L1M4 LINE L1 -3224 2922 2757 22 35 0 0 chr10 92726570 92726599 -52862689 + AT_rich Low_complexity Low_complexity 1 29 0 342 0 0 0 chr10 92727025 92727063 -52862225 + (CA)n Simple_repeat Simple_repeat 2 39 0 3002 198 42 78 chr10 92729682 92730153 -52859135 + L1P LINE L1 2272 2758 -3388 2108 80 19 51 chr10 92730153 92730464 -52858824 + AluY SINE Alu 1 301 -10 3002 198 42 78 chr10 92730464 92730534 -52858754 + L1P LINE L1 2758 2829 -3317 641 128 0 0 chr10 92730534 92730636 -52858652 + L1PA11 LINE L1 6073 6174 0 3002 198 42 78 chr10 92730636 92731120 -52858168 + L1P LINE L1 2829 3261 -2885 182 91 30 0 chr10 92731531 92731564 -52857724 + (CA)n Simple_repeat Simple_repeat 2 35 0 1170 207 92 21 chr10 92731792 92732130 -52857158 + MLT1A2 LTR MaLR 2 363 -11 750 351 42 17 chr10 92732143 92732633 -52856655 - L2 LINE L2 -245 3068 2567 210 195 39 0 chr10 92732692 92732769 -52856519 + GA-rich Low_complexity Low_complexity 4 83 0 215 208 26 78 chr10 92733529 92733606 -52855682 + L2 LINE L2 3194 3266 -6 666 232 80 2 chr10 92733834 92734124 -52855164 - MLT2F LTR ERVL -286 377 19 1127 295 118 58 chr10 92734838 92735638 -52853650 + L2 LINE L2 2047 2894 -420 311 274 105 16 chr10 92735815 92735939 -52853349 + L2 LINE L2 3138 3272 0 481 217 40 91 chr10 92736485 92736683 -52852605 + MLT1D LTR MaLR 5 192 -313 * 3891 150 17 14 chr10 92736671 92737371 -52851917 + MER50 LTR ERV1 10 711 -23 1071 207 67 81 chr10 92737417 92737775 -52851513 + MLT1D LTR MaLR 153 505 0 211 294 10 29 chr10 92737913 92738015 -52851273 + CT-rich Low_complexity Low_complexity 4 103 0 21 36 0 0 chr10 92738443 92738471 -52850817 + AT_rich Low_complexity Low_complexity 1 28 0 203 200 63 74 chr10 92739260 92739355 -52849933 + L2 LINE L2 2807 2900 -372 453 299 26 13 chr10 92739385 92739539 -52849749 + L2 LINE L2 3158 3313 0 244 319 22 30 chr10 92740237 92740372 -52848916 + GA-rich Low_complexity Low_complexity 5 138 0 255 299 19 28 chr10 92741069 92741176 -52848112 + MER94 DNA DNA 12 117 -17 348 319 78 16 chr10 92741690 92741881 -52847407 - L2 LINE L2 -7 3306 3104 302 169 39 26 chr10 92741903 92741980 -52847308 + L1MEc LINE L1 1883 1960 -4436 238 341 67 24 chr10 92742292 92742456 -52846832 + L2 LINE L2 3134 3304 -9 842 61 0 9 chr10 92742532 92742646 -52846642 + MLT2A1 LTR ERVL 1 113 -331 435 221 84 46 chr10 92742926 92743057 -52846231 + MIR SINE MIR 106 241 -21 406 293 40 64 chr10 92743106 92743355 -52845933 - MIR SINE MIR -19 243 1 24 85 0 0 chr10 92743561 92743620 -52845668 + AT_rich Low_complexity Low_complexity 1 59 0 1128 227 72 38 chr10 92743625 92744184 -52845104 - Charlie7 DNA MER1_type -113 2499 1922 1480 242 59 41 chr10 92744216 92744841 -52844447 - L1MCa LINE L1 -4260 2347 1519 313 136 30 0 chr10 92744909 92744975 -52844313 + L1ME1 LINE L1 5010 5077 -1069 1666 247 65 64 chr10 92745005 92745919 -52843369 + L1ME1 LINE L1 5189 6100 -66 9099 186 9 8 chr10 92746491 92749237 -52840051 + L1PA14 LINE L1 3415 6156 -5 29 0 0 0 chr10 92749237 92749266 -52840022 + AT_rich Low_complexity Low_complexity 1 29 0 560 176 59 0 chr10 92749623 92749742 -52839546 - L1MC3 LINE L1 -9 7776 7651 22 56 0 0 chr10 92749915 92749951 -52839337 + AT_rich Low_complexity Low_complexity 1 36 0 2133 100 44 20 chr10 92750437 92750807 -52838481 + L1PA10 LINE L1 5799 6176 0 30 69 0 0 chr10 92750813 92750871 -52838417 + AT_rich Low_complexity Low_complexity 1 58 0 233 250 16 0 chr10 92751446 92751510 -52837778 + (TAGA)n Simple_repeat Simple_repeat 2 66 0 3320 243 27 26 chr10 92751634 92753292 -52835996 + L1MEc LINE L1 1559 3187 -3028 1126 215 70 74 chr10 92753285 92753851 -52835437 + L1ME2 LINE L1 5569 5972 -194 * 613 235 7 13 chr10 92753760 92753913 -52835375 + L1MA10 LINE L1 6179 6330 -4 * 1000 58 7 29 chr10 92754084 92754223 -52835065 + L1PA4 LINE L1 6019 6154 -1 276 259 78 9 chr10 92754241 92754357 -52834931 + L1M4 LINE L1 5177 5300 -846 979 276 121 75 chr10 92754401 92755418 -52833870 + L1ME LINE L1 11 1200 -4880 1200 234 39 72 chr10 92755418 92755850 -52833438 + LTR52 LTR ERVL 1 418 -3 979 276 121 75 chr10 92755850 92756168 -52833120 + L1ME LINE L1 1200 1502 -4578 474 252 17 0 chr10 92756208 92756323 -52832965 + MER20 DNA MER1_type 84 200 -19 788 273 78 9 chr10 92756334 92756667 -52832621 + L1M4 LINE L1 4741 5096 -1050 3150 229 59 46 chr10 92756840 92757908 -52831380 + L1M4 LINE L1 3497 4578 -1568 844 311 42 14 chr10 92758943 92759300 -52829988 - MLT1I LTR MaLR -4 405 39 22 0 0 0 chr10 92760132 92760154 -52829134 + AT_rich Low_complexity Low_complexity 1 22 0 4003 37 4 2 chr10 92760862 92761322 -52827966 - L1PA2 LINE L1 0 6155 5695 270 0 0 0 chr10 92761525 92761555 -52827733 + (TG)n Simple_repeat Simple_repeat 1 30 0 776 171 0 6 chr10 92763314 92763484 -52825804 + (TG)n Simple_repeat Simple_repeat 2 170 0 471 263 229 0 chr10 92763777 92763952 -52825336 - MER97a DNA MER1_type? -274 620 406 6805 86 43 5 chr10 92763953 92764923 -52824365 - L1PA10 LINE L1 -10 6158 5187 4792 64 5 26 chr10 92764923 92765976 -52823312 + MER11A LTR ERVK 1 1266 0 3038 151 80 4 chr10 92765976 92766513 -52822775 - L1PA10 LINE L1 -954 5192 4615 558 251 27 35 chr10 92766515 92766775 -52822513 - MER97c DNA MER1_type? -635 418 120 2268 161 2 54 chr10 92766775 92767185 -52822103 + MLT1B LTR MaLR 2 390 0 558 251 27 35 chr10 92767185 92767247 -52822041 - MER97c DNA MER1_type? -933 120 59 715 294 6 11 chr10 92768874 92769054 -52820234 - MER97c DNA MER1_type? -911 179 1 288 0 0 0 chr10 92769164 92769196 -52820092 + (A)n Simple_repeat Simple_repeat 1 32 0 213 344 0 32 chr10 92769513 92769606 -52819682 + MIR3 SINE MIR 5 94 -114 505 251 123 0 chr10 92769606 92769769 -52819519 - MLT1A2 LTR MaLR 0 390 208 297 89 0 0 chr10 92769799 92769844 -52819444 + (GA)n Simple_repeat Simple_repeat 1 45 0 769 190 27 60 chr10 92769844 92770028 -52819260 - MLT1A2 LTR MaLR -196 178 1 10556 37 6 0 chr10 92770053 92771324 -52817964 + L1P LINE L1 3498 4776 -1370 7803 32 23 1 chr10 92771324 92772807 -52816481 + L1PA4 LINE L1 4654 6155 0 818 257 89 65 chr10 92773221 92773684 -52815604 + MLT1K LTR MaLR 1 474 -2 2306 108 0 0 chr10 92777686 92777983 -52811305 + AluSc SINE Alu 1 297 -12 2123 127 0 7 chr10 92779695 92779995 -52809293 - AluSx SINE Alu -14 298 1 1788 221 69 5 chr10 92780774 92781238 -52808050 + MER68 LTR ERV1 1 507 -55 784 189 88 83 chr10 92782485 92782702 -52806586 - MER20 DNA MER1_type -1 218 1 466 219 129 84 chr10 92782748 92782926 -52806362 + MER5A DNA MER1_type 4 189 0 1732 88 4 32 chr10 92783077 92783326 -52805962 - L1PA8 LINE L1 -5 6167 5926 2644 58 0 0 chr10 92783385 92783693 -52805595 - AluY SINE Alu -3 308 1 2144 147 0 0 chr10 92784909 92785216 -52804072 - AluSx SINE Alu -5 307 1 258 207 0 0 chr10 92785326 92785384 -52803904 + (TA)n Simple_repeat Simple_repeat 1 58 0 325 219 0 62 chr10 92786081 92786177 -52803111 + L1MC4 LINE L1 6614 6703 -1339 237 319 6 35 chr10 92786178 92786347 -52802941 + (TA)n Simple_repeat Simple_repeat 2 165 0 203 366 45 25 chr10 92787435 92787637 -52801651 - L2 LINE L2 -246 3026 2821 233 196 18 0 chr10 92789409 92789465 -52799823 + (CATA)n Simple_repeat Simple_repeat 3 59 0 342 288 165 18 chr10 92789841 92790011 -52799277 - MIR SINE MIR -30 232 38 1408 50 0 17 chr10 92792735 92792916 -52796372 - AluY SINE Alu -14 297 120 344 318 11 28 chr10 92793284 92793460 -52795828 + CT-rich Low_complexity Low_complexity 2 174 0 28 0 0 0 chr10 92794277 92794305 -52794983 + AT_rich Low_complexity Low_complexity 1 28 0 814 127 24 0 chr10 92795168 92795294 -52793994 + AluSp/q SINE Alu 177 305 -8 248 210 145 0 chr10 92795512 92795574 -52793714 - MER116 DNA Mariner -3 77 7 431 294 128 11 chr10 92796890 92797077 -52792211 - MIR SINE MIR -17 245 37 491 341 172 12 chr10 92797142 92797462 -52791826 + L2 LINE L2 2943 3313 0 2172 223 60 4 chr10 92797973 92798440 -52790848 - MLT1D LTR MaLR -8 497 5 201 376 116 17 chr10 92798908 92799089 -52790199 + L2 LINE L2 2779 2977 -337 283 314 44 44 chr10 92799214 92799373 -52789915 + L2 LINE L2 3150 3308 -5 354 301 10 10 chr10 92799455 92799558 -52789730 - L2 LINE L2 -581 2733 2631 10993 67 2 3 chr10 92799668 92801796 -52787492 - L1PA6 LINE L1 0 6154 4025 204 353 101 14 chr10 92802139 92802346 -52786942 + L2 LINE L2 2035 2259 -1055 208 397 16 8 chr10 92802483 92802609 -52786679 + L2 LINE L2 2283 2409 -905 27268 99 9 12 chr10 92802660 92806671 -52782617 + L1P LINE L1 11 4009 -2137 410 304 37 6 chr10 92806809 92806970 -52782318 - L2 LINE L2 -907 2407 2242 1805 286 69 46 chr10 92806972 92808595 -52780693 + L1ME3A LINE L1 2382 4042 -2104 1451 310 53 21 chr10 92808595 92809744 -52779544 + L1ME3A LINE L1 4766 5950 -220 207 175 0 0 chr10 92810005 92810045 -52779243 + GA-rich Low_complexity Low_complexity 1 40 0 22 35 0 0 chr10 92810074 92810103 -52779185 + AT_rich Low_complexity Low_complexity 1 29 0 1806 173 3 7 chr10 92810111 92810418 -52778870 + AluJb SINE Alu 1 306 -6 280 179 26 0 chr10 92810419 92810497 -52778791 + GA-rich Low_complexity Low_complexity 3 82 0 317 349 83 31 chr10 92810497 92810824 -52778464 - L2 LINE L2 -1550 1764 1421 277 333 116 52 chr10 92810859 92811246 -52778042 + L2 LINE L2 2861 3272 0 192 277 69 23 chr10 92811836 92811966 -52777322 - MIR3 SINE MIR -17 191 56 21 0 0 0 chr10 92813163 92813184 -52776104 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr10 92813561 92813581 -52775707 + (A)n Simple_repeat Simple_repeat 1 20 0 3409 245 27 2 chr10 92813700 92814614 -52774674 - L1 LINE L1 -3039 3107 2171 1283 166 38 10 chr10 92815477 92815766 -52773522 - L1MA9 LINE L1 -3 7728 7432 8140 196 32 15 chr10 92815799 92817759 -52771529 - L1MA9 LINE L1 -743 6822 4940 305 292 67 8 chr10 92818131 92818251 -52771037 + MIR SINE MIR 43 169 -93 1231 259 86 12 chr10 92818321 92818748 -52770540 + MLT1H LTR MaLR 60 593 0 487 111 16 95 chr10 92819401 92819527 -52769761 + L1PA16 LINE L1 6047 6162 -4 1280 187 26 29 chr10 92819528 92819871 -52769417 - L1MA9 LINE L1 -3157 4408 4067 610 158 24 39 chr10 92819875 92820002 -52769286 - MER6 DNA MER2_type -3 862 738 1478 275 44 12 chr10 92820049 92820239 -52769049 - L1MA9 LINE L1 -3498 4067 3885 406 62 46 0 chr10 92820239 92820304 -52768984 + (TAGA)n Simple_repeat Simple_repeat 2 69 0 1478 275 44 12 chr10 92820304 92821085 -52768203 - L1MA9 LINE L1 -3680 3885 3046 402 205 88 94 chr10 92821096 92821267 -52768021 + L1MB1 LINE L1 3087 3256 -2890 4132 226 53 18 chr10 92821268 92821630 -52767658 + L1MB1 LINE L1 3868 4216 -1952 462 53 13 26 chr10 92821630 92821706 -52767582 + (TA)n Simple_repeat Simple_repeat 2 76 0 4132 226 53 18 chr10 92821706 92823503 -52765785 + L1MB1 LINE L1 4216 6164 -4 462 226 44 77 chr10 92824156 92824337 -52764951 - L2 LINE L2 -39 3274 3100 182 275 0 0 chr10 92824406 92824446 -52764842 - L2 LINE L2 -254 3059 3020 306 333 49 0 chr10 92824710 92824854 -52764434 - MIR SINE MIR -13 249 99 1022 205 152 57 chr10 92824854 92825342 -52763946 - L1MC4 LINE L1 -322 7720 7187 656 100 0 10 chr10 92825788 92825888 -52763400 - AluSc SINE Alu -210 99 1 2265 109 10 0 chr10 92826666 92826970 -52762318 - AluSc SINE Alu -2 307 1 459 0 0 0 chr10 92827259 92827310 -52761978 + (T)n Simple_repeat Simple_repeat 1 51 0 229 79 0 0 chr10 92827310 92827348 -52761940 - L1M2 LINE L1 -496 5804 5767 43256 29 21 1 chr10 92827360 92833392 -52755896 - L1HS LINE L1 0 6155 1 360 247 0 32 chr10 92834117 92834210 -52755078 - L1MC4 LINE L1 -1339 6703 6614 316 242 22 22 chr10 92834130 92834211 -52755077 + L1MC4 LINE L1 6615 6698 -1344 * 2091 123 3 0 chr10 92834211 92834496 -52754792 - AluSg1 SINE Alu -23 286 1 4225 151 59 38 chr10 92834584 92835244 -52754044 - Tigger3b DNA MER2_type -1806 1222 578 3150 48 2 0 chr10 92835244 92835639 -52753649 - L1PA4 LINE L1 -3 6152 5757 4225 151 59 38 chr10 92835639 92835825 -52753463 - Tigger3b DNA MER2_type -2450 578 352 1681 149 10 43 chr10 92835825 92836127 -52753161 - AluJb SINE Alu 0 312 21 4225 151 59 38 chr10 92836127 92836207 -52753081 - Tigger3b DNA MER2_type -2676 352 275 600 192 0 0 chr10 92836208 92836307 -52752981 - Tigger3b DNA MER2_type -1131 100 2 24 53 0 0 chr10 92836935 92836973 -52752315 + AT_rich Low_complexity Low_complexity 1 38 0 730 253 121 49 chr10 92837029 92837334 -52751954 + MLT1G1 LTR MaLR 10 336 -259 422 247 91 19 chr10 92837377 92837531 -52751757 + MLT1G1 LTR MaLR 430 594 -1 631 256 81 31 chr10 92837665 92837923 -52751365 + MLT1G1-int LTR MaLR 308 578 -793 262 215 23 146 chr10 92838546 92838676 -52750612 + MLT1G1-int LTR MaLR 1076 1189 -182 796 254 90 138 chr10 92838866 92839491 -52749797 + MLT1G1 LTR MaLR 1 595 0 306 0 0 0 chr10 92839693 92839727 -52749561 + (CA)n Simple_repeat Simple_repeat 2 35 0 362 183 0 12 chr10 92840082 92840164 -52749124 + CT-rich Low_complexity Low_complexity 3 83 0 378 328 44 63 chr10 92840806 92841077 -52748211 - L1ME LINE L1 -531 5590 5325 1552 214 0 3 chr10 92841613 92841921 -52747367 + AluJo SINE Alu 6 312 0 25 0 0 0 chr10 92842234 92842259 -52747029 + AT_rich Low_complexity Low_complexity 1 25 0 22 56 0 0 chr10 92842514 92842550 -52746738 + AT_rich Low_complexity Low_complexity 1 36 0 182 330 137 22 chr10 92842620 92842802 -52746486 - L2 LINE L2 -2 3311 3109 2040 135 0 0 chr10 92842919 92843200 -52746088 - AluSx SINE Alu -31 281 1 210 191 0 0 chr10 92843292 92843339 -52745949 + CT-rich Low_complexity Low_complexity 2 48 0 225 197 158 0 chr10 92843515 92843591 -52745697 + MER103 DNA DNA 54 141 -25 2589 224 73 93 chr10 92844339 92844877 -52744411 - L1MD3 LINE L1 -15 7980 7433 461 231 22 0 chr10 92844877 92844968 -52744320 - MLT1F1 LTR MaLR -442 125 33 2589 224 73 93 chr10 92844968 92845027 -52744261 - L1MD3 LINE L1 -562 7433 7374 2497 52 3 3 chr10 92845027 92845336 -52743952 + AluY SINE Alu 1 309 -2 2589 224 73 93 chr10 92845336 92845743 -52743545 - L1MD3 LINE L1 -621 7374 6907 1322 256 116 44 chr10 92845964 92846617 -52742671 - L1MC4 LINE L1 -1124 6918 6219 675 244 58 16 chr10 92846639 92846881 -52742407 - L1MCc LINE L1 -3550 3391 3140 947 294 61 6 chr10 92846939 92847400 -52741888 - L1MD2 LINE L1 -24 6142 5644 466 279 44 6 chr10 92847466 92847624 -52741664 + MER106B DNA MER1_type 896 1059 0 946 239 42 31 chr10 92847637 92847926 -52741362 - L1MD2 LINE L1 -526 5640 5349 4489 175 7 32 chr10 92847945 92848152 -52741136 - L1MC2 LINE L1 -25 6319 6108 1914 170 0 3 chr10 92848152 92848458 -52740830 - AluSx SINE Alu -7 305 1 4489 175 7 32 chr10 92848458 92849157 -52740131 - L1MC2 LINE L1 -236 6108 5436 1194 265 96 49 chr10 92849307 92850103 -52739185 - L1MCc LINE L1 -4833 2108 1241 2012 132 7 0 chr10 92850103 92850414 -52738874 - AluSp SINE Alu 0 315 3 1194 265 96 49 chr10 92850414 92850864 -52738424 - L1MCc LINE L1 -5700 1241 814 512 244 70 92 chr10 92851046 92851664 -52737624 + L1MDa LINE L1 1309 1912 -4628 1041 191 60 132 chr10 92851668 92852071 -52737217 + MLT1A2 LTR MaLR 1 374 0 1323 198 23 0 chr10 92852071 92852334 -52736954 + MLT1A2-int LTR MaLR 1 269 -1466 26 0 0 0 chr10 92852340 92852366 -52736922 + AT_rich Low_complexity Low_complexity 1 26 0 6809 141 10 6 chr10 92852366 92854098 -52735190 - L1MA1 LINE L1 0 6302 4562 5524 204 39 72 chr10 92854094 92855625 -52733663 + MLT1A2-int LTR MaLR 255 1735 0 * 637 204 31 43 chr10 92855625 92855787 -52733501 + MLT1A2 LTR MaLR 1 160 -205 258 304 0 0 chr10 92855847 92855926 -52733362 + MLT1A2 LTR MaLR 181 259 -115 318 87 0 0 chr10 92856006 92856052 -52733236 + (CA)n Simple_repeat Simple_repeat 2 47 0 236 299 27 34 chr10 92856062 92856209 -52733079 + L1MDa LINE L1 2006 2151 -4570 342 217 136 65 chr10 92856408 92856592 -52732696 + L1MDa LINE L1 2421 2617 -4104 298 241 73 56 chr10 92856622 92856854 -52732434 + L1MDa LINE L1 2633 2868 -3672 1115 256 79 15 chr10 92856868 92857271 -52732017 - MLT1C LTR MaLR -38 429 1 366 286 68 55 chr10 92857416 92857636 -52731652 + L1MDa LINE L1 3046 3268 -3272 789 293 98 40 chr10 92857683 92858741 -52730547 + L1MDa LINE L1 3198 4317 -2223 13810 197 14 8 chr10 92859104 92864553 -52724735 + L1PB1 LINE L1 1332 6866 -1 22 0 0 0 chr10 92865820 92865842 -52723446 + GC_rich Low_complexity Low_complexity 1 22 0 194 323 166 45 chr10 92866449 92866672 -52722616 + MIR SINE MIR 12 261 -1 280 362 38 30 chr10 92867016 92867251 -52722037 + L2 LINE L2 1046 1282 -2032 315 153 17 0 chr10 92867496 92867555 -52721733 + MLT1C LTR MaLR 53 112 -355 * 848 190 20 41 chr10 92867551 92867746 -52721542 + MLT1C LTR MaLR 277 467 0 185 309 29 0 chr10 92867769 92867837 -52721451 + L2 LINE L2 3200 3269 -3 460 232 263 25 chr10 92869316 92869514 -52719774 - MIR SINE MIR -17 245 1 31 44 0 0 chr10 92869943 92869988 -52719300 + AT_rich Low_complexity Low_complexity 1 45 0 1535 254 45 11 chr10 92870032 92870657 -52718631 + MER114 LTR ERV 3 648 0 266 255 245 31 chr10 92871882 92872074 -52717214 + MIR SINE MIR 20 252 -10 236 196 18 36 chr10 92872397 92872453 -52716835 - MIR3 SINE MIR -49 159 105 279 348 107 33 chr10 92872462 92872798 -52716490 - L3 LINE CR1 -7 1570 1210 269 226 48 0 chr10 92872903 92872965 -52716323 + MIR SINE MIR 119 183 -79 22 35 0 0 chr10 92873480 92873509 -52715779 + AT_rich Low_complexity Low_complexity 1 29 0 414 288 59 35 chr10 92875658 92875828 -52713460 - MER96 DNA MER1_type 0 175 2 717 197 69 48 chr10 92875860 92876048 -52713240 + MLT1D LTR MaLR 1 192 -313 753 251 39 68 chr10 92876064 92876402 -52712886 + MLT1D LTR MaLR 169 496 -9 322 227 13 27 chr10 92877469 92877544 -52711744 + L2 LINE L2 3199 3272 0 222 258 0 0 chr10 92878852 92878914 -52710374 + (TG)n Simple_repeat Simple_repeat 1 62 0 22 0 0 0 chr10 92879458 92879480 -52709808 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr10 92879847 92879868 -52709420 + AT_rich Low_complexity Low_complexity 1 21 0 672 232 21 0 chr10 92879868 92880058 -52709230 - L1MA4 LINE L1 -7 6293 6100 24 85 0 0 chr10 92880140 92880199 -52709089 + AT_rich Low_complexity Low_complexity 1 59 0 367 203 38 83 chr10 92881273 92881406 -52707882 - L2 LINE L2 -54 3259 3133 316 206 29 39 chr10 92881422 92881524 -52707764 + L1MC4 LINE L1 6603 6703 -1339 359 309 24 24 chr10 92881604 92881727 -52707561 + MIR SINE MIR 26 148 -114 188 132 0 26 chr10 92881802 92881840 -52707448 + (TA)n Simple_repeat Simple_repeat 2 38 0 302 375 8 16 chr10 92881950 92882078 -52707210 - L2 LINE L2 -267 3046 2920 6057 203 38 41 chr10 92882277 92883902 -52705386 + L1MCa LINE L1 6 1625 -4801 886 152 69 0 chr10 92883898 92884102 -52705186 - L1MCa LINE L1 -4424 2002 1785 * 2328 77 0 26 chr10 92884535 92884848 -52704440 + AluY SINE Alu 1 305 -6 27 0 0 0 chr10 92884875 92884902 -52704386 + AT_rich Low_complexity Low_complexity 1 27 0 908 314 74 13 chr10 92885055 92885516 -52703772 + HERVL LTR ERVL 2805 3293 -2361 2651 215 44 39 chr10 92885530 92886199 -52703089 - L1MB5 LINE L1 -10 6400 5725 3179 44 0 0 chr10 92886199 92886584 -52702704 - L1PA5 LINE L1 0 6154 5770 2651 215 44 39 chr10 92886584 92886711 -52702577 - L1MB5 LINE L1 -685 5725 5600 512 268 12 6 chr10 92886688 92886852 -52702436 - L1MB5 LINE L1 -1453 4929 4765 * 1167 246 38 46 chr10 92886838 92887720 -52701568 - L1MB5 LINE L1 -3947 2437 1471 727 184 9 0 chr10 92887720 92887834 -52701454 - FRAM SINE Alu -62 114 1 2540 200 36 20 chr10 92887863 92888594 -52700694 - L1 LINE L1 -2324 5241 4500 5183 145 58 0 chr10 92888632 92889611 -52699677 - L1PA14 LINE L1 -17 6144 5151 6404 146 23 138 chr10 92889799 92891582 -52697706 - L1PA14 LINE L1 -1021 5125 3548 13284 171 36 6 chr10 92891582 92894281 -52695007 - L1 LINE L1 -3014 4551 1730 195 42 0 0 chr10 92894281 92894305 -52694983 + (TC)n Simple_repeat Simple_repeat 1 24 0 13284 171 36 6 chr10 92894305 92894874 -52694414 - L1 LINE L1 -5835 1730 1180 232 215 31 15 chr10 92895377 92895442 -52693846 - L1MB5 LINE L1 -5825 478 413 1328 204 9 88 chr10 92895573 92895891 -52693397 - AluJb SINE Alu -17 295 3 690 167 0 38 chr10 92895900 92896032 -52693256 - FLAM_A SINE Alu 0 142 16 656 186 0 0 chr10 92896029 92896131 -52693157 - AluJb SINE Alu -208 104 3 * 927 152 0 14 chr10 92896160 92896305 -52692983 - FLAM_C SINE Alu 0 143 1 1327 310 50 37 chr10 92896530 92897315 -52691973 + HERVL LTR ERVL 3743 4537 -1227 305 180 54 108 chr10 92897319 92897430 -52691858 - L1ME LINE L1 -590 5576 5472 722 288 76 9 chr10 92897453 92897783 -52691505 + L1ME3A LINE L1 5591 5942 -228 346 300 92 26 chr10 92898019 92898374 -52690914 + MLT1J2 LTR MaLR 19 394 -15 255 339 67 12 chr10 92898522 92898687 -52690601 + MIR SINE MIR 89 262 0 2204 212 35 53 chr10 92898900 92899523 -52689765 - LTR9 LTR ERV1 0 612 1 631 252 56 0 chr10 92899839 92899982 -52689306 - MER5A DNA MER1_type -1 188 38 276 319 69 28 chr10 92899854 92899998 -52689290 + MER5A DNA MER1_type 35 184 -5 * 312 332 136 23 chr10 92900869 92901089 -52688199 - MIR SINE MIR -3 259 15 2575 162 9 3 chr10 92901408 92902089 -52687199 + MER72 LTR ERV1 5 722 0 775 289 116 72 chr10 92902089 92902196 -52687092 - L2 LINE L2 -3 3310 3209 225 0 0 0 chr10 92902196 92902221 -52687067 + (CA)n Simple_repeat Simple_repeat 2 26 0 775 289 116 72 chr10 92902221 92902569 -52686719 - L2 LINE L2 -104 3209 2835 584 298 0 0 chr10 92903701 92903869 -52685419 + LTR33 LTR ERVL 1 168 -353 518 208 42 17 chr10 92904718 92904838 -52684450 + MER5A DNA MER1_type 3 125 -64 2220 107 30 0 chr10 92906786 92907084 -52682204 + AluSc SINE Alu 1 307 -2 255 269 193 8 chr10 92907900 92908019 -52681269 - MIR SINE MIR -4 258 118 228 305 55 78 chr10 92908223 92908351 -52680937 + MIR3 SINE MIR 38 162 -46 2454 91 3 0 chr10 92908455 92908764 -52680524 + AluY SINE Alu 1 310 -1 215 320 131 49 chr10 92909125 92909247 -52680041 + MIR SINE MIR 21 152 -110 387 305 28 17 chr10 92910526 92910703 -52678585 + L2 LINE L2 3077 3255 -58 292 363 51 0 chr10 92911334 92911491 -52677797 - MIR SINE MIR 0 262 98 2371 83 10 3 chr10 92912274 92912574 -52676714 - AluSx SINE Alu 0 312 11 467 290 87 55 chr10 92912820 92913130 -52676158 + MLT1I LTR MaLR 71 390 -19 221 335 103 68 chr10 92913138 92913419 -52675869 + L2 LINE L2 2941 3231 -41 290 273 173 33 chr10 92913748 92913898 -52675390 + MIR SINE MIR 21 191 -71 277 331 30 23 chr10 92914703 92914836 -52674452 - MIR SINE MIR -93 169 36 241 196 20 0 chr10 92914918 92914969 -52674319 + A-rich Low_complexity Low_complexity 4 55 0 456 176 8 17 chr10 92915107 92915226 -52674062 + CT-rich Low_complexity Low_complexity 3 120 0 292 237 10 41 chr10 92915877 92915974 -52673314 + L1MC/D LINE L1 5732 5825 -1983 265 47 47 0 chr10 92916098 92916141 -52673147 + (TCTA)n Simple_repeat Simple_repeat 2 46 0 24 32 0 0 chr10 92916281 92916312 -52672976 + AT_rich Low_complexity Low_complexity 1 31 0 808 145 8 0 chr10 92917489 92917620 -52671668 + L1MA4A LINE L1 6167 6298 -5 2194 169 29 23 chr10 92917722 92918106 -52671182 - MLT1B LTR MaLR 0 390 5 252 235 0 0 chr10 92918160 92918228 -52671060 + (TG)n Simple_repeat Simple_repeat 1 68 0 1862 145 62 0 chr10 92919952 92920241 -52669047 - AluSx SINE Alu -5 307 1 185 139 23 0 chr10 92920339 92920382 -52668906 + (CA)n Simple_repeat Simple_repeat 1 44 0 1173 290 3 19 chr10 92920549 92920863 -52668425 + L1MDb LINE L1 9 317 -6092 373 287 118 0 chr10 92921008 92921144 -52668144 + HERVL LTR ERVL 3726 3877 -1777 757 329 55 7 chr10 92921148 92921437 -52667851 + HERVL LTR ERVL 4006 4308 -1456 707 289 59 30 chr10 92921603 92921873 -52667415 + HERVL LTR ERVL 4509 4786 -978 913 300 50 39 chr10 92921944 92922428 -52666860 + HERVL LTR ERVL 4892 5380 -384 23 0 0 0 chr10 92925026 92925049 -52664239 + AT_rich Low_complexity Low_complexity 1 23 0 210 345 103 9 chr10 92925088 92925204 -52664084 - MIR SINE MIR -110 152 26 339 337 84 72 chr10 92925464 92925811 -52663477 - L2 LINE L2 -32 3240 2890 268 374 40 59 chr10 92926584 92926857 -52662431 - L2 LINE L2 -10 3262 2995 276 189 0 14 chr10 92927429 92927503 -52661785 - L1ME LINE L1 -4128 2268 2196 8230 25 3 0 chr10 92927505 92929172 -52660116 - L1PA3 LINE L1 -5 6150 4481 10787 35 0 0 chr10 92929275 92930540 -52658748 + L1P LINE L1 3187 4451 -1695 325 268 26 88 chr10 92930540 92930734 -52658554 - L1ME LINE L1 -4181 2215 2034 1041 297 70 46 chr10 92930880 92931909 -52657379 - L1ME LINE L1 -4441 1955 847 441 0 0 0 chr10 92931909 92931958 -52657330 + (TG)n Simple_repeat Simple_repeat 2 50 0 1041 297 70 46 chr10 92931958 92932150 -52657138 - L1ME LINE L1 -5549 847 661 2821 104 0 6 chr10 92932360 92932725 -52656563 - THE1B LTR MaLR -1 363 1 362 369 10 5 chr10 92932899 92933105 -52656183 - L1ME LINE L1 -6016 380 174 * 408 275 16 12 chr10 92933100 92933232 -52656056 - L1M3 LINE L1 -585 5598 5464 1716 92 0 0 chr10 92933584 92933801 -52655487 + AluSq SINE Alu 1 217 -96 208 326 33 0 chr10 92934456 92934548 -52654740 - MIR SINE MIR -69 139 45 3321 167 82 14 chr10 92934631 92935253 -52654035 + LTR51 LTR ERV1 1 664 -7 253 263 12 0 chr10 92936010 92936090 -52653198 + (TG)n Simple_repeat Simple_repeat 1 81 0 348 299 36 36 chr10 92936710 92936847 -52652441 - MIR SINE MIR -39 223 87 337 307 54 24 chr10 92937161 92937327 -52651961 + MIR SINE MIR 21 191 -71 2480 210 146 23 chr10 92937417 92938118 -52651170 - LTR48 LTR ERV1 0 787 1 1843 236 45 19 chr10 92938985 92939472 -52649816 - LTR26 LTR ERV1 0 603 104 829 331 63 9 chr10 92940756 92941293 -52647995 + L1ME4a LINE L1 5556 6121 0 483 256 138 19 chr10 92941668 92941828 -52647460 + MER5A DNA MER1_type 11 189 0 279 300 27 99 chr10 92941869 92942121 -52647167 + MIR SINE MIR 25 262 0 4845 120 20 10 chr10 92943158 92943842 -52645446 + LTR8 LTR ERV1 1 691 0 579 256 71 52 chr10 92945028 92945415 -52643873 - MER57-int LTR ERV1 -2946 1990 1563 599 229 79 56 chr10 92945424 92945690 -52643598 - LTR57-int LTR ERVL -3832 1511 1240 * 775 119 19 183 chr10 92945623 92945891 -52643397 - MER57-int LTR ERV1 -215 3129 858 632 238 21 61 chr10 92945907 92946163 -52643125 - MER57-int LTR ERV1 -3633 2313 1840 473 171 154 45 chr10 92946241 92946380 -52642908 - MER57-int LTR ERV1 -4433 1667 503 314 270 45 27 chr10 92947099 92947210 -52642078 - MER57-int LTR ERV1 -5433 2104 1992 273 211 51 96 chr10 92947368 92947524 -52641764 - MER57-int LTR ERV1 -5741 1796 1648 600 232 52 103 chr10 92947591 92947958 -52641330 - MER34B LTR ERV1 0 565 218 556 130 0 0 chr10 92947990 92948067 -52641221 + U6 snRNA snRNA 1 77 -30 30 27 0 0 chr10 92948103 92948140 -52641148 + AT_rich Low_complexity Low_complexity 1 37 0 251 200 133 56 chr10 92948176 92948266 -52641022 - MER34 LTR ERV1 -420 122 26 288 302 111 32 chr10 92948277 92948403 -52640885 + L2 LINE L2 3137 3272 0 2243 108 3 0 chr10 92950137 92950433 -52638855 + AluSp SINE Alu 1 297 -16 1692 256 89 16 chr10 92950453 92950840 -52638448 - MLT1E2 LTR MaLR -25 601 161 2859 152 52 2 chr10 92950840 92951302 -52637986 - MER31A LTR ERV1 0 485 1 1692 256 89 16 chr10 92951302 92951465 -52637823 - MLT1E2 LTR MaLR -465 161 11 2187 223 48 21 chr10 92951902 92952418 -52636870 - LTR31 LTR ERV1 -15 604 75 378 348 42 0 chr10 92952760 92952878 -52636410 - L2 LINE L2 0 3313 3191 195 259 136 0 chr10 92953942 92954023 -52635265 - MIR SINE MIR -118 144 53 228 377 0 0 chr10 92954062 92954139 -52635149 - MIR SINE MIR -183 79 3 956 206 50 134 chr10 92954250 92954833 -52634455 + MER34 LTR ERV1 13 585 0 1868 137 0 0 chr10 92954984 92955247 -52634041 - AluSx SINE Alu -12 300 38 622 296 106 55 chr10 92955916 92956486 -52632802 + L2 LINE L2 2654 3278 -35 1030 236 73 58 chr10 92957551 92958000 -52631288 + L1MD2 LINE L1 5904 6359 0 189 0 0 0 chr10 92958004 92958025 -52631263 + (A)n Simple_repeat Simple_repeat 1 21 0 948 277 10 62 chr10 92958871 92959358 -52629930 + L1ME1 LINE L1 917 1378 -5165 303 233 12 12 chr10 92959369 92959455 -52629833 + L1ME1 LINE L1 1469 1554 -4986 290 279 121 10 chr10 92959461 92959751 -52629537 + L1ME1 LINE L1 2092 2413 -4127 7080 261 41 27 chr10 92959782 92961919 -52627369 + L1ME1 LINE L1 2493 4678 -1882 3702 153 21 6 chr10 92961919 92962588 -52626700 + L1PB4 LINE L1 5477 6155 -1 7080 261 41 27 chr10 92962588 92964442 -52624846 + L1ME1 LINE L1 4678 6505 -55 279 0 0 0 chr10 92964470 92964501 -52624787 + (A)n Simple_repeat Simple_repeat 1 31 0 4688 179 61 18 chr10 92964505 92965983 -52623305 + L1MC2 LINE L1 4798 6337 -7 854 348 138 24 chr10 92967022 92968136 -52621152 + L2 LINE L2 1811 3052 -220 301 240 0 19 chr10 92968336 92968440 -52620848 + GA-rich Low_complexity Low_complexity 4 105 0 595 330 85 21 chr10 92968622 92969010 -52620278 + MLT1J2 LTR MaLR 1 413 -37 23 68 0 0 chr10 92969657 92969701 -52619587 + AT_rich Low_complexity Low_complexity 1 44 0 217 277 15 0 chr10 92970115 92970180 -52619108 + (TA)n Simple_repeat Simple_repeat 1 66 0 536 308 72 13 chr10 92970478 92970852 -52618436 - L1ME3A LINE L1 -234 5936 5541 468 277 108 24 chr10 92970986 92971477 -52617811 - L1ME3A LINE L1 -743 5403 4872 303 155 35 0 chr10 92971827 92971885 -52617403 - LTR16A1 LTR ERVL 0 457 398 2353 120 3 11 chr10 92971927 92972294 -52616994 + L1PA16 LINE L1 5794 6157 -9 265 284 11 21 chr10 92972313 92972408 -52616880 - LTR16A1 LTR ERVL -308 149 56 232 250 40 59 chr10 92973562 92973714 -52615574 + L1ME3A LINE L1 313 461 -5658 690 300 68 16 chr10 92974022 92974842 -52614446 + L1ME3A LINE L1 3078 3940 -2189 686 285 52 36 chr10 92975090 92975476 -52613812 + L1ME3A LINE L1 5732 6123 -30 843 254 19 4 chr10 92976351 92976607 -52612681 + L1MEd LINE L1 2512 2771 -3358 3080 115 17 70 chr10 92976624 92977258 -52612030 + MER4B LTR ERV1 1 771 -8 2699 260 55 41 chr10 92977274 92978450 -52610838 + L1MEd LINE L1 2790 3992 -2137 189 0 0 0 chr10 92978450 92978471 -52610817 + (CAAAA)n Simple_repeat Simple_repeat 5 25 0 2699 260 55 41 chr10 92978471 92978814 -52610474 + L1MEd LINE L1 3992 4329 -1800 381 162 0 0 chr10 92979022 92979090 -52610198 + (TA)n Simple_repeat Simple_repeat 1 68 0 448 316 42 27 chr10 92979100 92979376 -52609912 - L1MEc LINE L1 -4513 1883 1596 201 39 0 0 chr10 92979376 92979402 -52609886 + (TG)n Simple_repeat Simple_repeat 1 26 0 448 316 42 27 chr10 92979402 92979575 -52609713 - L1MEc LINE L1 -4800 1596 1427 474 146 0 0 chr10 92979575 92979657 -52609631 + (TC)n Simple_repeat Simple_repeat 2 83 0 239 363 0 20 chr10 92980102 92980248 -52609040 + CT-rich Low_complexity Low_complexity 2 144 0 * 311 254 7 51 chr10 92980188 92980326 -52608962 + T-rich Low_complexity Low_complexity 5 136 0 303 323 19 12 chr10 92980376 92980537 -52608751 + CT-rich Low_complexity Low_complexity 1 162 0 8637 214 59 18 chr10 92980687 92981869 -52607419 + L1MCa LINE L1 1729 2861 -3763 2526 50 0 3 chr10 92981869 92982170 -52607118 - AluY SINE Alu -11 300 1 8637 214 59 18 chr10 92982170 92985063 -52604225 + L1MCa LINE L1 2861 6008 -616 409 312 70 11 chr10 92985342 92985528 -52603760 + L1ME3A LINE L1 2077 2273 -4123 290 188 14 0 chr10 92985590 92985659 -52603629 + L1ME3A LINE L1 2294 2363 -3852 * 1276 258 106 22 chr10 92985652 92986722 -52602566 + L1ME3A LINE L1 4618 5892 -347 318 315 9 9 chr10 92986908 92987016 -52602272 + L1ME3A LINE L1 6115 6222 -17 216 233 0 23 chr10 92987097 92987140 -52602148 - L2 LINE L2 -21 3251 3210 2073 125 26 3 chr10 92987150 92987490 -52601798 - AluSq SINE Alu 0 347 1 298 281 0 0 chr10 92987544 92987608 -52601680 - MIR SINE MIR -66 142 79 183 222 83 14 chr10 92987640 92987712 -52601576 + L2 LINE L2 654 730 -2584 222 313 0 16 chr10 92987964 92988028 -52601260 + MIR SINE MIR 83 145 -63 278 287 20 67 chr10 92989567 92989717 -52599571 - MIR SINE MIR -119 143 1 237 319 77 18 chr10 92990616 92990785 -52598503 - MIR SINE MIR -64 198 20 298 338 97 28 chr10 92991690 92991906 -52597382 + MIR SINE MIR 20 250 -12 35 41 0 0 chr10 92993267 92993316 -52595972 + AT_rich Low_complexity Low_complexity 1 49 0 36 0 0 0 chr10 92994715 92994751 -52594537 + AT_rich Low_complexity Low_complexity 1 36 0 234 0 0 0 chr10 92994822 92994848 -52594440 + (TC)n Simple_repeat Simple_repeat 1 26 0 * 291 104 0 0 chr10 92994847 92994895 -52594393 + (CA)n Simple_repeat Simple_repeat 1 48 0 195 100 0 0 chr10 92997089 92997119 -52592169 + (TG)n Simple_repeat Simple_repeat 1 30 0 216 299 24 99 chr10 92998061 92998222 -52591066 - MIR SINE MIR -62 146 8 262 267 35 69 chr10 93002612 93002728 -52586560 - MIR SINE MIR -77 131 20 1717 140 42 36 chr10 93002735 93003043 -52586245 - AluJo SINE Alu -2 310 1 463 272 69 40 chr10 93003170 93003343 -52585945 + MER5B DNA MER1_type 1 178 0 190 139 28 0 chr10 93003410 93003446 -52585842 - L2 LINE L2 -1 3312 3276 223 234 0 47 chr10 93003448 93003512 -52585776 + MIR SINE MIR 186 246 -16 210 292 52 10 chr10 93004280 93004376 -52584912 - MIR SINE MIR -7 255 156 209 200 0 0 chr10 93005691 93005726 -52583562 + polypurine Low_complexity Low_complexity 3 37 0 198 71 0 0 chr10 93006116 93006144 -52583144 + (TC)n Simple_repeat Simple_repeat 1 28 0 22 0 0 0 chr10 93007662 93007684 -52581604 + AT_rich Low_complexity Low_complexity 1 22 0 237 321 31 47 chr10 93008680 93008873 -52580415 + L2 LINE L2 2622 2811 -503 401 271 42 42 chr10 93009325 93009469 -52579819 - MIR SINE MIR -33 229 86 253 310 14 41 chr10 93010896 93011041 -52578247 + MIR SINE MIR 120 260 -2 312 335 46 12 chr10 93011134 93011307 -52577981 - MIR SINE MIR -64 198 20 193 250 0 0 chr10 93011792 93011832 -52577456 + L2 LINE L2 3266 3305 -8 1806 154 42 7 chr10 93012164 93012449 -52576839 - AluSx SINE Alu -17 295 1 272 213 0 16 chr10 93013712 93013773 -52575515 + MIR SINE MIR 24 83 -125 298 311 76 0 chr10 93014401 93014520 -52574768 + L2 LINE L2 2986 3113 -159 463 382 6 0 chr10 93015654 93015832 -52573456 + (CA)n Simple_repeat Simple_repeat 2 180 0 650 174 14 58 chr10 93017329 93017467 -52571821 - FLAM_A SINE Alu -1 132 1 228 250 79 86 chr10 93021132 93021272 -52568016 - MIR SINE MIR -59 149 11 396 138 0 0 chr10 93021659 93021724 -52567564 + (TC)n Simple_repeat Simple_repeat 2 66 0 489 322 44 40 chr10 93021983 93022412 -52566876 - L1MEc LINE L1 -5965 431 1 491 254 53 146 chr10 93022469 93023355 -52565933 - L1MC4a LINE L1 -126 7916 7113 3459 148 76 0 chr10 93023535 93024138 -52565150 - MER39B LTR ERV1 -4 649 1 365 235 25 0 chr10 93025320 93025401 -52563887 + MER81 DNA DNA 32 114 0 230 189 0 0 chr10 93025708 93025745 -52563543 - L1MA9 LINE L1 0 6312 6276 * 1046 163 22 0 chr10 93025739 93025917 -52563371 + L1MA7 LINE L1 5758 5939 -352 365 0 0 22 chr10 93026167 93026213 -52563075 + (CA)n Simple_repeat Simple_repeat 2 46 0 1134 23 47 12 chr10 93026230 93026402 -52562886 + (GAAA)n Simple_repeat Simple_repeat 2 179 0 192 213 160 53 chr10 93026462 93026556 -52562732 + MIR3 SINE MIR 68 171 -37 314 104 0 42 chr10 93027301 93027349 -52561939 - U2 snRNA snRNA -142 46 1 181 333 35 18 chr10 93027377 93027491 -52561797 + L2 LINE L2 690 805 -2509 535 277 133 5 chr10 93027535 93027730 -52561558 - MIR SINE MIR -20 242 23 180 346 0 26 chr10 93028231 93028309 -52560979 + L2 LINE L2 1359 1434 -1880 261 311 26 26 chr10 93028628 93028779 -52560509 + L2 LINE L2 2110 2260 -1054 846 152 15 0 chr10 93028941 93029073 -52560215 + AluJo SINE Alu 1 134 -178 213 193 18 18 chr10 93029298 93029355 -52559933 + (TAA)n Simple_repeat Simple_repeat 3 59 0 822 331 103 47 chr10 93029537 93030934 -52558354 - L2 LINE L2 -373 2941 1466 1610 199 51 8 chr10 93031024 93031375 -52557913 + L1MD1 LINE L1 5877 6242 0 188 364 92 46 chr10 93031378 93031661 -52557627 - L2 LINE L2 -1944 1370 1075 297 180 0 4 chr10 93031879 93031942 -52557346 - MLT2D LTR ERVL -2 412 357 219 191 24 12 chr10 93031943 93032027 -52557261 + GA-rich Low_complexity Low_complexity 2 86 0 1650 188 36 31 chr10 93032038 93032394 -52556894 - MLT2D LTR ERVL -56 358 1 353 260 26 0 chr10 93032435 93032512 -52556776 + MER94 DNA DNA 55 133 -1 288 280 301 11 chr10 93033619 93033805 -52555483 + MIR SINE MIR 4 243 -19 991 244 15 0 chr10 93033871 93034076 -52555212 + MER63A DNA MER1_type 3 210 0 2338 180 124 72 chr10 93035154 93035873 -52553415 - LTR1B LTR ERV1 -63 957 1 2248 92 3 0 chr10 93035906 93036198 -52553090 + AluSp SINE Alu 21 313 0 6711 180 40 42 chr10 93036404 93037918 -52551370 + L1MCa LINE L1 22 1533 -4893 2346 89 0 13 chr10 93037918 93038220 -52551068 + AluSc SINE Alu 1 298 -11 1485 274 77 8 chr10 93038226 93038811 -52550477 - L1MCa LINE L1 -3400 3026 2402 1039 153 62 14 chr10 93038822 93039031 -52550257 - L1MCa LINE L1 -4066 2360 2142 639 240 145 39 chr10 93039211 93039416 -52549872 - L1M4 LINE L1 -2686 3460 3278 1694 158 30 27 chr10 93039416 93039713 -52549575 - AluJb SINE Alu -14 298 1 639 240 145 39 chr10 93039713 93039866 -52549422 - L1M4 LINE L1 -2868 3278 3064 1159 195 0 9 chr10 93040641 93040851 -52548437 - AluJb SINE Alu -30 282 75 256 269 16 44 chr10 93040993 93041175 -52548113 + (TTTA)n Simple_repeat Simple_repeat 4 180 0 356 324 0 43 chr10 93041348 93041533 -52547755 + CT-rich Low_complexity Low_complexity 1 177 0 1153 229 36 13 chr10 93042115 93042425 -52546863 + L1MB7 LINE L1 5871 6184 0 21 36 0 0 chr10 93042670 93042698 -52546590 + AT_rich Low_complexity Low_complexity 1 28 0 1757 134 7 40 chr10 93043681 93043958 -52545330 + AluSx SINE Alu 14 281 -31 246 118 0 0 chr10 93044316 93044350 -52544938 + MER45A DNA AcHobo 79 112 -66 1173 173 14 34 chr10 93044350 93044558 -52544730 - AluJo SINE Alu -22 290 87 464 176 0 0 chr10 93044558 93044632 -52544656 + MER45A DNA AcHobo 105 178 0 207 255 167 59 chr10 93044693 93044795 -52544493 - L2 LINE L2 0 3313 3201 218 315 106 75 chr10 93045560 93045992 -52543296 + L2 LINE L2 2632 3090 -182 1129 172 0 16 chr10 93046619 93046811 -52542477 + AluSx SINE Alu 1 189 -123 202 211 19 19 chr10 93047018 93047070 -52542218 + L3 LINE CR1 1282 1333 -244 23 0 0 0 chr10 93048508 93048531 -52540757 + AT_rich Low_complexity Low_complexity 1 23 0 274 271 47 0 chr10 93049405 93049421 -52539867 - L1MA4A LINE L1 -3 6300 6285 5105 127 39 11 chr10 93049421 93050238 -52539050 - L1PB4 LINE L1 -7 6149 5310 352 307 73 7 chr10 93050687 93050824 -52538464 - ERVL LTR ERVL -3499 2265 2120 630 115 0 0 chr10 93050957 93051044 -52538244 + AluS SINE Alu 3 89 -223 885 26 163 7 chr10 93051044 93051197 -52538091 + LTR13 LTR ERVK 1 177 -830 322 239 54 0 chr10 93051603 93051695 -52537593 - THE1-int LTR MaLR -577 1003 907 876 239 79 18 chr10 93051699 93051979 -52537309 + MSTA LTR MaLR 76 372 -56 486 234 156 0 chr10 93052008 93052149 -52537139 - MST-int LTR MaLR -981 670 508 1173 274 9 9 chr10 93052152 93052484 -52536804 + MSTA-int LTR MaLR 32 363 -1288 207 259 89 62 chr10 93053432 93053544 -52535744 - MER5A DNA MER1_type 0 189 75 371 208 302 10 chr10 93053569 93053665 -52535623 + FLAM_A SINE Alu 1 124 -9 288 172 0 0 chr10 93054646 93054704 -52534584 + (TG)n Simple_repeat Simple_repeat 2 59 0 953 100 7 7 chr10 93055996 93056136 -52533152 + THE1C-int LTR MaLR 1441 1580 0 2720 90 5 16 chr10 93056136 93056515 -52532773 + THE1C LTR MaLR 1 375 0 1095 180 0 6 chr10 93056515 93056698 -52532590 - Tigger2 DNA MER2_type -257 2461 2280 386 284 74 23 chr10 93057221 93057426 -52531862 + L1ME2 LINE L1 5841 6061 -101 192 343 14 14 chr10 93058852 93058925 -52530363 + MIR3 SINE MIR 132 204 -4 862 229 11 11 chr10 93058934 93059109 -52530179 + MER5A DNA MER1_type 2 176 -13 24 0 0 0 chr10 93060630 93060654 -52528634 + AT_rich Low_complexity Low_complexity 1 24 0 2121 180 2 37 chr10 93060871 93061276 -52528012 - L1MC1 LINE L1 -49 6284 5894 471 243 230 0 chr10 93062242 93062390 -52526898 + MIR SINE MIR 73 254 -8 438 244 92 0 chr10 93063075 93063194 -52526094 - L2 LINE L2 -4 3309 3180 268 239 214 8 chr10 93063598 93063715 -52525573 - MST-int LTR MaLR -1004 647 507 * 306 199 17 2 chr10 93063711 93063787 -52525501 + MST-int LTR MaLR 27 103 -1477 810 237 79 62 chr10 93063909 93064213 -52525075 + MSTA LTR MaLR 75 385 -43 561 199 153 10 chr10 93064221 93064375 -52524913 - MST-int LTR MaLR -963 661 463 * 1165 214 8 4 chr10 93064370 93064636 -52524652 + MSTA-int LTR MaLR 28 294 -1357 2235 93 17 7 chr10 93065342 93065643 -52523645 - AluSq SINE Alu -9 304 1 845 170 0 0 chr10 93065658 93065799 -52523489 + FRAM SINE Alu 35 175 -1 1057 111 217 21 chr10 93065868 93066057 -52523231 - MER30 DNA MER1_type 0 230 5 253 256 13 26 chr10 93067308 93067386 -52521902 + MIR3 SINE MIR 9 85 -123 936 209 6 0 chr10 93067525 93067697 -52521591 + MER5A DNA MER1_type 17 189 0 3008 51 11 0 chr10 93067972 93068342 -52520946 + MER11C LTR ERVK 698 1071 0 1099 241 15 15 chr10 93069116 93069386 -52519902 - AluJo SINE Alu -37 275 6 1380 186 40 0 chr10 93070347 93070600 -52518688 + L1MA5 LINE L1 5679 5941 -359 1087 233 31 8 chr10 93070608 93070866 -52518422 + AluJo SINE Alu 1 264 -48 1293 170 80 0 chr10 93070933 93071209 -52518079 + L1MA5 LINE L1 5997 6294 -6 293 296 0 0 chr10 93071245 93071316 -52517972 + MLT1F1 LTR MaLR 79 149 -418 566 236 0 0 chr10 93072148 93072254 -52517034 + U6 snRNA snRNA 1 106 -1 633 206 0 0 chr10 93074453 93074550 -52514738 + FLAM_A SINE Alu 2 98 -44 22 70 0 0 chr10 93074559 93074602 -52514686 + AT_rich Low_complexity Low_complexity 1 43 0 841 149 26 45 chr10 93074808 93074932 -52514356 + AluSx SINE Alu 3 125 -187 216 0 0 0 chr10 93074932 93074956 -52514332 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 841 149 26 45 chr10 93074956 93074985 -52514303 + AluSx SINE Alu 125 153 -159 22 0 0 0 chr10 93076865 93076887 -52512401 + AT_rich Low_complexity Low_complexity 1 22 0 222 317 0 0 chr10 93077548 93077608 -52511680 + (CATA)n Simple_repeat Simple_repeat 4 63 0 3445 128 22 0 chr10 93078250 93078742 -52510546 + L1PA10 LINE L1 5655 6157 -11 1782 161 25 0 chr10 93079148 93079427 -52509861 - AluSq SINE Alu -27 286 1 338 162 29 15 chr10 93080034 93080102 -52509186 - MER34C LTR ERV1 -94 491 423 937 90 90 0 chr10 93080359 93080492 -52508796 + AluSg SINE Alu 1 145 -165 744 181 0 9 chr10 93080621 93080737 -52508551 - FLAM_C SINE Alu -18 115 1 2699 193 54 9 chr10 93081103 93081641 -52507647 - MER68 LTR ERV1 0 562 1 270 311 57 52 chr10 93082368 93082701 -52506587 + L2 LINE L2 2745 3106 -166 24 53 0 0 chr10 93083173 93083211 -52506077 + AT_rich Low_complexity Low_complexity 1 38 0 2713 17 0 0 chr10 93083358 93083650 -52505638 - L1PA2 LINE L1 0 6155 5864 361 22 0 0 chr10 93083650 93083696 -52505592 + L1P LINE L1 5344 5389 -766 1101 210 13 4 chr10 93084879 93085108 -52504180 + L1MB8 LINE L1 5653 5883 -295 502 172 11 32 chr10 93085254 93085347 -52503941 + AluSg/x SINE Alu 205 295 -17 413 230 10 0 chr10 93086296 93086396 -52502892 + L1MA9 LINE L1 6163 6263 -49 1947 135 7 13 chr10 93087317 93087621 -52501667 - AluSx SINE Alu -10 302 1 245 360 0 0 chr10 93087797 93087886 -52501402 + L2 LINE L2 2577 2665 -649 2047 121 3 7 chr10 93089456 93089754 -52499534 - AluSq SINE Alu -16 297 1 404 302 6 23 chr10 93089948 93090120 -52499168 + CT-rich Low_complexity Low_complexity 3 171 0 415 199 40 0 chr10 93090326 93090419 -52498869 - MSTA LTR MaLR -270 105 1 5816 231 57 25 chr10 93090419 93091988 -52497300 - MSTA-int LTR MaLR 0 1651 34 470 275 28 7 chr10 93091990 93092132 -52497156 + THE1-int LTR MaLR 464 608 -972 1236 252 55 60 chr10 93092284 93092424 -52496864 + MER21B LTR ERV1 291 430 -433 1361 167 18 106 chr10 93092424 93092753 -52496535 - AluJb SINE Alu -11 301 2 1236 252 55 60 chr10 93092753 93092831 -52496457 + MER21B LTR ERV1 430 507 -356 1828 158 3 10 chr10 93092831 93093122 -52496166 + AluJo SINE Alu 9 297 -15 1236 252 55 60 chr10 93093122 93093354 -52495934 + MER21B LTR ERV1 507 740 -123 1847 140 11 3 chr10 93094025 93094310 -52494978 + AluSx SINE Alu 5 291 -21 841 142 65 0 chr10 93094564 93094719 -52494569 - AluSq SINE Alu -147 166 2 2830 28 0 3 chr10 93094766 93095086 -52494202 + L1PA4 LINE L1 5834 6152 -3 281 171 60 0 chr10 93095107 93095224 -52494064 + (TA)n Simple_repeat Simple_repeat 2 125 0 1977 163 18 90 chr10 93095224 93095722 -52493566 + L1MA9 LINE L1 5774 6235 -77 318 214 0 0 chr10 93095730 93095786 -52493502 + L1M4 LINE L1 4879 4934 -1212 2096 88 7 14 chr10 93095786 93096071 -52493217 - THE1A LTR MaLR 0 355 73 1355 243 92 7 chr10 93096198 93096601 -52492687 - L1MC4a LINE L1 -660 7148 6712 1937 100 18 94 chr10 93096982 93097311 -52491977 - AluSq SINE Alu -9 304 1 184 287 58 58 chr10 93097507 93097594 -52491694 - MIR SINE MIR -17 245 159 196 335 88 44 chr10 93098934 93099161 -52490127 + MIR SINE MIR 20 256 -6 652 218 0 32 chr10 93099317 93099441 -52489847 + FLAM_A SINE Alu 6 125 -17 183 42 0 0 chr10 93099481 93099505 -52489783 + (TTTTTG)n Simple_repeat Simple_repeat 4 27 0 732 160 39 26 chr10 93099888 93100044 -52489244 - MER21A LTR ERV1 -29 902 745 829 149 45 0 chr10 93100048 93100182 -52489106 + Tigger7 DNA MER2_type 2352 2491 0 587 218 0 0 chr10 93101421 93101522 -52487766 - AluJ/FLAM SINE Alu -210 102 2 1413 201 82 6 chr10 93101530 93101849 -52487439 - L1M3 LINE L1 -361 5822 5480 432 168 0 107 chr10 93102012 93102143 -52487145 + AluY SINE Alu 2 118 -193 528 283 61 42 chr10 93103157 93103369 -52485919 - MLT1K LTR MaLR -1 587 372 1236 284 70 32 chr10 93103527 93103885 -52485403 - MLT1J LTR MaLR 0 511 129 2008 130 57 41 chr10 93103885 93104254 -52485034 - THE1C LTR MaLR 0 375 1 1236 284 70 32 chr10 93104254 93104363 -52484925 - MLT1J LTR MaLR -382 129 26 2967 230 81 20 chr10 93104603 93105469 -52483819 + L1M2 LINE L1 3253 4171 -1975 2193 155 19 8 chr10 93105465 93105840 -52483448 + L1PA15 LINE L1 5766 6144 -21 * 815 194 37 0 chr10 93105850 93106041 -52483247 + L1M2 LINE L1 4152 4349 -1797 2727 141 45 7 chr10 93107047 93107494 -52481794 + MER4C LTR ERV1 2 465 0 695 328 23 8 chr10 93108292 93108548 -52480740 - MIR SINE MIR -1 261 2 1488 231 60 11 chr10 93110015 93110366 -52478922 + MSTA LTR MaLR 1 368 -60 1294 170 22 0 chr10 93110395 93110625 -52478663 + MSTA-int LTR MaLR 13 247 -1404 1158 182 37 12 chr10 93110628 93110870 -52478418 + MSTA-int LTR MaLR 1404 1651 0 1501 230 32 27 chr10 93110870 93111244 -52478044 + MSTA LTR MaLR 1 376 -52 474 207 157 0 chr10 93111259 93111410 -52477878 - MST-int LTR MaLR -959 661 465 3710 170 84 8 chr10 93111608 93112625 -52476663 + L1M2 LINE L1 4642 5743 -557 1880 93 4 12 chr10 93112625 93112882 -52476406 - AluSg SINE Alu -12 298 44 3710 170 84 8 chr10 93112882 93112894 -52476394 + L1M2 LINE L1 5743 5753 -547 442 293 8 0 chr10 93113357 93113480 -52475808 - MIR SINE MIR -60 202 79 3700 80 110 5 chr10 93114138 93114703 -52474585 - MER11A LTR ERVK -642 624 1 274 309 43 36 chr10 93115886 93116025 -52473263 - MIR SINE MIR -111 151 12 238 261 0 0 chr10 93116148 93116194 -52473094 + MER5A DNA MER1_type 59 104 -85 306 211 42 0 chr10 93116367 93116438 -52472850 + MER5A DNA MER1_type 116 189 0 213 39 0 0 chr10 93116670 93116696 -52472592 + (T)n Simple_repeat Simple_repeat 1 26 0 1522 104 4 70 chr10 93117295 93117536 -52471752 - AluSp SINE Alu -88 225 1 871 212 103 106 chr10 93117638 93117940 -52471348 - AluJo SINE Alu -1 301 1 1048 244 108 27 chr10 93118032 93118553 -52470735 + L2 LINE L2 2541 3097 -216 1299 221 30 17 chr10 93118557 93118855 -52470433 - AluJo SINE Alu -10 302 1 1461 187 31 61 chr10 93118864 93119223 -52470065 - MLT1D LTR MaLR -8 497 150 565 213 14 35 chr10 93119225 93119366 -52469922 + FLAM_C SINE Alu 6 143 0 1425 214 10 16 chr10 93119368 93119671 -52469617 + AluJo SINE Alu 1 301 -11 257 51 26 0 chr10 93120175 93120214 -52469074 + (CA)n Simple_repeat Simple_repeat 2 41 0 238 299 82 10 chr10 93120490 93120587 -52468701 - MIR SINE MIR -60 148 45 240 261 0 24 chr10 93123025 93123275 -52466013 + (CA)n Simple_repeat Simple_repeat 1 243 0 483 289 6 12 chr10 93123315 93123488 -52465800 + (CA)n Simple_repeat Simple_repeat 1 172 0 602 306 107 5 chr10 93124058 93124264 -52465024 - MIR SINE MIR -13 249 23 553 344 48 3 chr10 93124305 93124639 -52464649 - L1ME4a LINE L1 -267 5854 5506 224 307 105 26 chr10 93125089 93125203 -52464085 - MIR SINE MIR -65 143 21 288 77 0 0 chr10 93125914 93125953 -52463335 + (CA)n Simple_repeat Simple_repeat 2 40 0 264 277 157 0 chr10 93125966 93126049 -52463239 + L2 LINE L2 3177 3272 0 343 184 87 19 chr10 93126130 93126233 -52463055 + LTR33 LTR ERVL 14 123 -398 778 221 28 22 chr10 93126304 93126485 -52462803 - MER5A DNA MER1_type -5 184 3 1709 120 88 42 chr10 93126509 93126656 -52462632 - AluSx SINE Alu -15 297 158 2783 93 27 13 chr10 93126656 93127031 -52462257 - L1PA10 LINE L1 -2 6166 5787 1709 120 88 42 chr10 93127031 93127167 -52462121 - AluSx SINE Alu -154 158 1 280 319 159 12 chr10 93127180 93127343 -52461945 - MIR SINE MIR -74 188 2 963 187 12 0 chr10 93128200 93128371 -52460917 - AluSq SINE Alu -140 173 1 1746 127 41 20 chr10 93128399 93128691 -52460597 + AluSq SINE Alu 1 298 -15 387 0 0 0 chr10 93128755 93128798 -52460490 + (TC)n Simple_repeat Simple_repeat 1 43 0 216 0 0 0 chr10 93128797 93128821 -52460467 + (CA)n Simple_repeat Simple_repeat 1 24 0 * 211 268 18 0 chr10 93128957 93129013 -52460275 + (TAA)n Simple_repeat Simple_repeat 1 57 0 333 0 0 0 chr10 93129506 93129543 -52459745 + (A)n Simple_repeat Simple_repeat 1 37 0 16118 43 7 2 chr10 93130229 93132217 -52457071 - L1P LINE L1 -2080 4066 2069 1823 36 5 0 chr10 93132213 93132433 -52456855 + L1P LINE L1 1826 2046 -4100 * 25 31 0 0 chr10 93132470 93132502 -52456786 + AT_rich Low_complexity Low_complexity 1 32 0 354 329 87 14 chr10 93132869 93133213 -52456075 - HAL1b LINE L1 -588 760 392 218 297 8 51 chr10 93133214 93133332 -52455956 + CT-rich Low_complexity Low_complexity 2 114 0 * 230 251 0 37 chr10 93133247 93133414 -52455874 + CT-rich Low_complexity Low_complexity 1 160 0 358 325 12 12 chr10 93133430 93133596 -52455692 + CT-rich Low_complexity Low_complexity 3 168 0 10727 30 3 3 chr10 93134073 93136060 -52453228 + L1PA4 LINE L1 4168 6155 0 2263 73 0 0 chr10 93136075 93136350 -52452938 + AluY SINE Alu 21 295 -16 4350 199 31 21 chr10 93137884 93139585 -52449703 + L1MB3 LINE L1 4457 6180 -3 388 248 51 8 chr10 93139798 93139915 -52449373 + L1ME2 LINE L1 2080 2201 -4183 211 302 179 0 chr10 93140056 93140162 -52449126 + MIR SINE MIR 19 143 -119 183 184 0 0 chr10 93140461 93140499 -52448789 + (TGAA)n Simple_repeat Simple_repeat 3 40 0 554 262 43 43 chr10 93140950 93141189 -52448099 + L1MC/D LINE L1 5575 5802 -331 932 225 35 21 chr10 93142065 93142354 -52446934 + L1ME2 LINE L1 3161 3453 -2929 * 1479 266 26 0 chr10 93142346 93142764 -52446524 + L1ME2 LINE L1 4740 5168 -1214 2381 266 47 23 chr10 93142764 93143679 -52445609 + L1ME2 LINE L1 5428 6368 -32 2305 88 10 0 chr10 93143730 93144025 -52445263 + AluSp SINE Alu 8 305 -8 191 316 101 0 chr10 93144175 93144254 -52445034 - MIR SINE MIR -88 120 34 375 210 119 85 chr10 93145706 93145882 -52443406 + MIR SINE MIR 68 249 -13 1188 216 28 0 chr10 93146209 93146427 -52442861 - MER58A DNA MER1_type 0 224 1 186 118 20 137 chr10 93146693 93146744 -52442544 - L2 LINE L2 -4 3309 3265 1204 279 97 11 chr10 93148628 93149242 -52440046 - L1ME LINE L1 -370 5800 5121 198 357 0 14 chr10 93149731 93149801 -52439487 - MIR SINE MIR -165 97 29 243 0 0 0 chr10 93150192 93150219 -52439069 + (TG)n Simple_repeat Simple_repeat 1 27 0 383 365 55 27 chr10 93151689 93151908 -52437380 - L2 LINE L2 -4 3268 3044 303 256 150 48 chr10 93152008 93152215 -52437073 - Charlie8 DNA MER1_type -2153 264 37 511 283 63 19 chr10 93152968 93153173 -52436115 + MIR SINE MIR 23 236 -26 301 266 46 9 chr10 93154223 93154332 -52434956 - 7SK RNA RNA -68 125 13 295 348 86 56 chr10 93154550 93154924 -52434364 - L2 LINE L2 -3 3269 2885 269 282 42 49 chr10 93155227 93155369 -52433919 - L3 LINE CR1 -148 1429 1289 437 287 64 35 chr10 93155387 93155669 -52433619 - L2 LINE L2 -4 3309 3020 1901 262 94 20 chr10 93155837 93156822 -52432466 - L1M4 LINE L1 -2868 3278 2221 233 367 0 0 chr10 93156984 93157063 -52432225 - L3 LINE CR1 -739 838 760 190 229 171 14 chr10 93157152 93157222 -52432066 - MER5A DNA MER1_type -83 106 26 211 366 37 19 chr10 93157561 93157722 -52431566 - L3 LINE CR1 -997 580 417 2923 167 40 65 chr10 93157731 93158334 -52430954 - L1MC2 LINE L1 -464 5880 5297 2125 138 0 3 chr10 93158334 93158646 -52430642 - AluSx SINE Alu -1 311 1 2923 167 40 65 chr10 93158646 93158883 -52430405 - L1MC2 LINE L1 -1047 5297 5056 23 33 0 0 chr10 93158898 93158928 -52430360 + AT_rich Low_complexity Low_complexity 1 30 0 781 278 60 8 chr10 93159434 93159682 -52429606 - MIR SINE MIR -1 261 1 1677 128 51 0 chr10 93160994 93161251 -52428037 + L1PB1 LINE L1 5866 6135 -16 414 214 81 146 chr10 93163221 93163396 -52425892 - L2 LINE L2 -6 3307 3159 551 242 51 65 chr10 93163396 93163611 -52425677 - MER58C DNA MER1_type -3 212 1 414 214 81 146 chr10 93163611 93163743 -52425545 - L2 LINE L2 -154 3159 3020 2033 167 83 39 chr10 93163958 93164365 -52424923 + MSTC LTR MaLR 2 426 -2 205 146 0 42 chr10 93164712 93164760 -52424528 + (TAAAAA)n Simple_repeat Simple_repeat 2 47 0 402 333 119 25 chr10 93165560 93165878 -52423410 + L2 LINE L2 2924 3271 -1 2724 294 144 30 chr10 93165893 93167610 -52421678 + L2 LINE L2 1145 3092 -221 353 282 59 0 chr10 93167729 93167814 -52421474 + MER81 DNA DNA 3 92 -22 205 288 30 15 chr10 93167828 93167894 -52421394 + L2 LINE L2 3247 3313 0 408 349 11 16 chr10 93168707 93168896 -52420392 - MIR SINE MIR -28 234 47 318 245 53 11 chr10 93170172 93170266 -52419022 - MIR SINE MIR -43 219 122 564 307 163 0 chr10 93171213 93171428 -52417860 + MIR SINE MIR 13 262 0 267 232 0 0 chr10 93171678 93171734 -52417554 + MIR3 SINE MIR 149 204 -4 2415 169 51 11 chr10 93173186 93173635 -52415653 + MLT1C LTR MaLR 1 467 0 285 339 18 54 chr10 93173712 93173824 -52415464 + L2 LINE L2 3137 3244 -28 327 248 118 33 chr10 93174335 93174488 -52414800 - MIR SINE MIR -77 185 20 254 304 284 0 chr10 93174901 93175049 -52414239 + MIR SINE MIR 46 235 -27 192 231 0 0 chr10 93176272 93176311 -52412977 - MIR SINE MIR -119 143 105 317 288 90 49 chr10 93176800 93177088 -52412200 + L2 LINE L2 2290 2589 -725 582 288 6 0 chr10 93177360 93177523 -52411765 - MIR SINE MIR -83 179 16 383 328 8 0 chr10 93177529 93177651 -52411637 + L2 LINE L2 3150 3272 0 437 290 29 14 chr10 93178426 93178564 -52410724 - MIR3 SINE MIR -5 203 64 258 276 118 0 chr10 93179151 93179278 -52410010 - MIR SINE MIR -13 249 108 384 256 64 0 chr10 93179990 93180115 -52409173 - MER103 DNA DNA -12 154 22 14869 121 46 8 chr10 93181107 93181263 -52408025 + Tigger1 DNA MER2_type 30 179 -2239 186 43 0 0 chr10 93181263 93181286 -52408002 + (TTA)n Simple_repeat Simple_repeat 3 25 0 14869 121 46 8 chr10 93181286 93182204 -52407084 + Tigger1 DNA MER2_type 179 1060 -1358 2070 115 3 0 chr10 93182204 93182491 -52406797 - AluSc SINE Alu -21 288 1 14869 121 46 8 chr10 93182491 93183691 -52405597 + Tigger1 DNA MER2_type 1060 2393 -25 338 267 20 20 chr10 93184422 93184523 -52404765 - MIR SINE MIR -87 175 75 885 269 106 45 chr10 93186023 93186446 -52402842 + LTR16A1 LTR ERVL 1 449 -8 319 300 22 67 chr10 93189360 93189540 -52399748 - L2 LINE L2 -200 3072 2901 539 182 24 0 chr10 93190317 93190438 -52398850 + L1P5 LINE L1 5445 5572 -584 196 270 66 107 chr10 93190714 93190910 -52398378 - MIR SINE MIR -34 228 41 221 338 52 13 chr10 93191587 93191767 -52397521 + MIR SINE MIR 44 230 -32 343 206 0 0 chr10 93191884 93191947 -52397341 + MER63 DNA MER1_type 701 763 -297 502 314 0 10 chr10 93193073 93193277 -52396011 + L1M4 LINE L1 3426 3627 -2519 479 285 67 12 chr10 93193277 93193442 -52395846 + MLT1J2 LTR MaLR 1 174 -276 1552 290 86 25 chr10 93193661 93194106 -52395182 + L1M4 LINE L1 3625 4042 -2104 1457 204 101 17 chr10 93194106 93194464 -52394824 - MLT1B LTR MaLR -2 388 1 1552 290 86 25 chr10 93194464 93195182 -52394106 + L1M4 LINE L1 4042 4873 -1273 286 264 77 51 chr10 93195205 93195440 -52393848 + L1ME LINE L1 4330 4570 -1576 294 176 20 0 chr10 93195678 93195729 -52393559 + L1MC3 LINE L1 6092 6143 -1642 * 380 239 83 89 chr10 93195712 93195976 -52393312 + L1ME LINE L1 5594 5861 -305 23 68 0 0 chr10 93196163 93196207 -52393081 + AT_rich Low_complexity Low_complexity 1 44 0 580 278 93 52 chr10 93196257 93196742 -52392546 + HAL1b LINE L1 674 1178 -170 945 184 0 0 chr10 93196898 93197066 -52392222 + FRAM SINE Alu 2 169 -7 671 200 0 0 chr10 93197806 93197921 -52391367 - FRAM SINE Alu -56 120 6 378 255 159 28 chr10 93198348 93198493 -52390795 - L3 LINE CR1 -697 880 717 585 320 70 63 chr10 93199693 93200121 -52389167 - L3 LINE CR1 -870 707 277 189 0 0 0 chr10 93200286 93200307 -52388981 + (CA)n Simple_repeat Simple_repeat 2 22 0 227 339 97 18 chr10 93200389 93200554 -52388734 - MIR SINE MIR -12 250 73 201 350 43 61 chr10 93201596 93201759 -52387529 - L2 LINE L2 -1 3271 3112 1749 173 3 16 chr10 93201797 93202109 -52387179 + AluJb SINE Alu 5 312 0 1170 200 30 0 chr10 93202712 93202947 -52386341 + L1MC2 LINE L1 5985 6226 -118 * 5068 163 34 13 chr10 93202943 93203968 -52385320 + L1PB4 LINE L1 4737 5796 -360 468 0 0 0 chr10 93203968 93204020 -52385268 + (TA)n Simple_repeat Simple_repeat 1 52 0 5068 163 34 13 chr10 93204020 93204388 -52384900 + L1PB4 LINE L1 5796 6155 -1 556 201 36 7 chr10 93204388 93204513 -52384775 + L1MC2 LINE L1 6202 6344 0 420 71 0 0 chr10 93256079 93256135 -52333153 + (TC)n Simple_repeat Simple_repeat 1 56 0 235 315 0 0 chr10 93256135 93256227 -52333061 + (CA)n Simple_repeat Simple_repeat 2 93 0 25 0 0 0 chr10 93257220 93257245 -52332043 + AT_rich Low_complexity Low_complexity 1 25 0 326 342 57 31 chr10 93257412 93257870 -52331418 + L2 LINE L2 2586 3051 -262 330 310 30 10 chr10 93257964 93258064 -52331224 + L2 LINE L2 3163 3264 -8 256 253 14 58 chr10 93258297 93258577 -52330711 + CT-rich Low_complexity Low_complexity 1 267 0 203 191 32 11 chr10 93258612 93258706 -52330582 + C-rich Low_complexity Low_complexity 2 97 0 14829 38 2 18 chr10 93258867 93260757 -52328531 - L1P LINE L1 -1226 4920 3062 275 237 44 18 chr10 93261491 93261605 -52327683 + (TCTCTG)n Simple_repeat Simple_repeat 6 122 0 237 302 0 0 chr10 93261814 93261867 -52327421 - MER58 DNA MER1_type -2367 53 1 596 234 24 5 chr10 93262118 93262330 -52326958 + MLT1H1 LTR MaLR 1 209 -381 1000 139 13 126 chr10 93262330 93262560 -52326728 - MER20 DNA MER1_type 0 219 16 1097 246 95 12 chr10 93262588 93262913 -52326375 + MLT1H1 LTR MaLR 202 553 -2 490 139 13 0 chr10 93263104 93263183 -52326105 - MADE1 DNA Mariner 0 80 1 21 0 0 0 chr10 93263442 93263463 -52325825 + AT_rich Low_complexity Low_complexity 1 21 0 250 32 0 0 chr10 93263831 93263862 -52325426 + L1PA2 LINE L1 4802 4832 -1314 7725 24 0 7 chr10 93264194 93265336 -52323952 + L1PA2 LINE L1 5018 6155 0 1045 256 124 69 chr10 93265951 93266501 -52322787 + MLT1H1 LTR MaLR 3 548 -7 231 254 8 76 chr10 93266633 93266751 -52322537 - MIR SINE MIR -57 205 96 205 280 54 65 chr10 93268136 93268229 -52321059 + MIR SINE MIR 40 131 -131 21 36 0 0 chr10 93268307 93268335 -52320953 + AT_rich Low_complexity Low_complexity 1 28 0 274 294 126 0 chr10 93268778 93268897 -52320391 + L2 LINE L2 2526 2659 -655 399 273 137 43 chr10 93268941 93269241 -52320047 + MLT1J1 LTR MaLR 66 393 -53 599 309 98 43 chr10 93269276 93269888 -52319400 + L2 LINE L2 2670 3311 -2 420 253 118 68 chr10 93270250 93270752 -52318536 + L1ME4a LINE L1 5347 5873 -248 33 56 0 0 chr10 93271532 93271586 -52317702 + AT_rich Low_complexity Low_complexity 1 54 0 358 239 62 0 chr10 93272159 93272289 -52316999 - Charlie7 DNA MER1_type -41 2571 2434 1107 287 45 22 chr10 93272291 93272799 -52316489 - Charlie7 DNA MER1_type -1890 722 203 767 243 157 0 chr10 93272802 93273082 -52316206 + MER5C DNA MER1_type 1 324 0 2534 183 29 113 chr10 93273128 93273741 -52315547 - REP3 LTR ERV 0 562 1 340 206 19 19 chr10 93273742 93273849 -52315439 - Charlie7 DNA MER1_type -2448 164 58 214 328 115 0 chr10 93274048 93274170 -52315118 - L2 LINE L2 0 3272 3137 395 324 118 17 chr10 93274492 93274730 -52314558 + MIR SINE MIR 1 262 0 657 226 251 37 chr10 93274974 93275376 -52313912 - MLT1H LTR MaLR -4 545 58 691 230 25 0 chr10 93277148 93277309 -52311979 - MER5B DNA MER1_type -9 169 5 458 219 0 0 chr10 93277496 93277578 -52311710 - MER81 DNA DNA -29 85 4 232 246 14 43 chr10 93278265 93278334 -52310954 - L2 LINE L2 -65 3207 3141 360 252 52 0 chr10 93280222 93280337 -52308951 + MIR SINE MIR 57 177 -85 359 259 132 75 chr10 93280433 93280661 -52308627 + MIR SINE MIR 22 262 0 314 298 0 11 chr10 93281589 93281683 -52307605 - MIR SINE MIR -161 101 9 207 139 0 0 chr10 93281987 93282023 -52307265 + (CA)n Simple_repeat Simple_repeat 1 36 0 593 296 208 13 chr10 93282150 93282529 -52306759 - L2 LINE L2 -1 3312 2860 470 254 101 6 chr10 93284621 93284790 -52304498 + MLT1J2 LTR MaLR 21 205 -245 601 150 22 22 chr10 93285634 93285814 -52303474 + (CA)n Simple_repeat Simple_repeat 1 180 0 195 42 0 0 chr10 93287820 93287844 -52301444 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 194 339 42 0 chr10 93288171 93288289 -52300999 + L2 LINE L2 3139 3261 -11 23 33 0 0 chr10 93288948 93288978 -52300310 + AT_rich Low_complexity Low_complexity 1 30 0 252 287 23 11 chr10 93290045 93290132 -52299156 + L2 LINE L2 3209 3296 -17 434 222 89 22 chr10 93293752 93293887 -52295401 + MER103 DNA DNA 11 154 -12 261 295 90 0 chr10 93293989 93294111 -52295177 - L3 LINE CR1 -723 854 722 287 266 0 13 chr10 93295289 93295368 -52293920 - MER103 DNA DNA -78 88 11 391 211 70 99 chr10 93296578 93296749 -52292539 + HAL1 LINE L1 1488 1653 -854 1781 174 61 121 chr10 93297086 93297269 -52292019 - L1PA14 LINE L1 0 6161 5969 2096 108 3 63 chr10 93297269 93297602 -52291686 - AluSp SINE Alu 0 313 1 1781 174 61 121 chr10 93297602 93298038 -52291250 - L1PA14 LINE L1 -192 5969 5579 3563 172 43 5 chr10 93298227 93299233 -52290055 - L1MA6 LINE L1 -649 5651 4613 3547 148 17 25 chr10 93299233 93299872 -52289416 + L1MA6 LINE L1 5662 6300 0 382 307 0 69 chr10 93300298 93300487 -52288801 + L1M4 LINE L1 2874 3049 -3097 686 244 117 0 chr10 93300569 93300782 -52288506 - MIR SINE MIR -5 257 20 500 283 88 49 chr10 93300789 93301118 -52288170 + L1M4 LINE L1 3174 3515 -2631 891 290 106 35 chr10 93301388 93302489 -52286799 + L1M4 LINE L1 3868 5046 -1100 392 271 54 30 chr10 93302463 93302666 -52286622 + L1MEc LINE L1 9 216 -6180 * 432 0 0 0 chr10 93302691 93302739 -52286549 + (CA)n Simple_repeat Simple_repeat 2 49 0 435 56 0 0 chr10 93302762 93302816 -52286472 + L1MA2 LINE L1 5920 5973 -331 705 87 16 16 chr10 93302905 93303032 -52286256 + L1MA2 LINE L1 5973 6099 -205 3351 153 17 50 chr10 93303267 93303929 -52285359 - Tigger7 DNA MER2_type -1847 640 1 477 242 23 8 chr10 93303994 93304126 -52285162 - MIR SINE MIR -32 230 97 310 314 29 7 chr10 93305212 93305349 -52283939 + MIR SINE MIR 3 142 -120 882 262 96 72 chr10 93305362 93305883 -52283405 - MLT1G1 LTR MaLR -2 593 20 180 298 0 0 chr10 93305905 93305962 -52283326 + MIR SINE MIR 156 212 -50 661 237 0 40 chr10 93306075 93306227 -52283061 + MIR SINE MIR 93 238 -24 253 262 0 0 chr10 93307375 93307436 -52281852 + MER116 DNA Mariner 18 78 -2 193 311 39 19 chr10 93307514 93307617 -52281671 + MIR SINE MIR 128 232 -30 355 321 113 27 chr10 93308555 93308776 -52280512 - L2 LINE L2 -2 3270 3031 521 237 30 59 chr10 93312168 93312399 -52276889 - MIR SINE MIR -4 258 34 1163 260 130 29 chr10 93312439 93312577 -52276711 + MER69 DNA AcHobo 1 124 -2402 2489 128 8 0 chr10 93312577 93312935 -52276353 + MER46B DNA MER2_type 1 236 0 1163 260 130 29 chr10 93312935 93313312 -52275976 + MER69 DNA AcHobo 124 568 -1958 980 200 61 41 chr10 93313310 93313366 -52275922 + MER69 DNA AcHobo 2010 2063 -463 * 1723 190 3 0 chr10 93313366 93313655 -52275633 + AluJb SINE Alu 1 290 -22 980 200 61 41 chr10 93313655 93313893 -52275395 + MER69 DNA AcHobo 2063 2310 -216 375 23 0 0 chr10 93313893 93313937 -52275351 + (TG)n Simple_repeat Simple_repeat 1 44 0 604 225 46 40 chr10 93313939 93314112 -52275176 + MER69 DNA AcHobo 2350 2523 -3 385 276 6 49 chr10 93315344 93315507 -52273781 + L1MC4a LINE L1 4903 5058 -1088 1227 283 25 73 chr10 93315672 93316316 -52272972 + L1MC4a LINE L1 5266 5807 -314 1277 108 0 6 chr10 93316319 93316495 -52272793 + L1PA16 LINE L1 5792 5966 -200 25793 178 45 33 chr10 93316503 93322570 -52266718 + L1ME2 LINE L1 7 6154 -10 2172 143 0 9 chr10 93322694 93323009 -52266279 + AluSx SINE Alu 1 312 0 509 308 62 40 chr10 93323125 93323525 -52265763 + L1ME LINE L1 5260 5668 -502 578 294 73 75 chr10 93324297 93325155 -52264133 + L1MEc LINE L1 819 1528 -4898 7366 228 51 49 chr10 93325193 93327950 -52261338 + L1M2c LINE L1 4 2665 -4124 315 318 19 19 chr10 93328185 93328339 -52260949 + L1MC4 LINE L1 463 616 -5914 224 89 0 67 chr10 93328357 93328402 -52260886 + (TC)n Simple_repeat Simple_repeat 1 42 0 365 214 10 0 chr10 93328422 93328520 -52260768 + (TA)n Simple_repeat Simple_repeat 2 100 0 1623 256 83 54 chr10 93328631 93329844 -52259444 + L1MC4 LINE L1 1403 2650 -3890 4281 220 62 32 chr10 93329850 93331210 -52258078 + L1MC4 LINE L1 3305 4704 -1836 750 184 100 53 chr10 93331192 93331513 -52257775 + L1MC4 LINE L1 5364 5699 -841 * 4951 230 47 84 chr10 93331524 93332330 -52256958 + L1MC4 LINE L1 5778 6612 -1824 3931 125 9 5 chr10 93332330 93332890 -52256398 - L1PA15 LINE L1 -9 6156 5595 1680 168 7 7 chr10 93332890 93333175 -52256113 + AluJo SINE Alu 19 303 -9 4951 230 47 84 chr10 93333175 93333238 -52256050 + L1MC4 LINE L1 6611 6675 -1761 2286 99 3 0 chr10 93333238 93333532 -52255756 + AluSg SINE Alu 1 295 -15 4951 230 47 84 chr10 93333532 93334352 -52254936 + L1MC4 LINE L1 6675 7386 -1050 1987 129 7 10 chr10 93334352 93334646 -52254642 - AluSx SINE Alu -18 294 2 4951 230 47 84 chr10 93334646 93334951 -52254337 + L1MC4 LINE L1 7386 7701 -735 373 280 8 53 chr10 93334953 93335085 -52254203 + MLT1F1 LTR MaLR 5 130 -437 1319 147 48 198 chr10 93335087 93335253 -52254035 + L1MD3 LINE L1 7415 7604 -391 2048 126 13 17 chr10 93335253 93335554 -52253734 + AluSq SINE Alu 1 300 -13 1319 147 48 198 chr10 93335554 93335595 -52253693 + L1MD3 LINE L1 7604 7650 -345 912 133 0 0 chr10 93335595 93335775 -52253513 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 1319 147 48 198 chr10 93335775 93336050 -52253238 + L1MD3 LINE L1 7650 7825 -170 935 65 81 0 chr10 93336052 93336176 -52253112 - MER85 DNA T2_type -5 134 1 323 277 80 0 chr10 93336176 93336313 -52252975 + L1MD3 LINE L1 7824 7971 -24 1475 265 36 58 chr10 93336321 93336870 -52252418 + L1ME1 LINE L1 5422 5956 -210 2382 103 3 0 chr10 93336870 93337181 -52252107 + AluSx SINE Alu 1 312 0 1475 265 36 58 chr10 93337181 93337288 -52252000 + L1ME1 LINE L1 5956 6064 -102 195 129 0 0 chr10 93337308 93337339 -52251949 + (TATATG)n Simple_repeat Simple_repeat 4 34 0 7945 28 0 10 chr10 93337359 93338843 -52250445 + L1PA3 LINE L1 4678 6152 -3 1333 116 10 5 chr10 93338856 93339054 -52250234 + L1PA16 LINE L1 5959 6157 -9 22 0 0 0 chr10 93339056 93339078 -52250210 + AT_rich Low_complexity Low_complexity 1 22 0 680 102 0 42 chr10 93339496 93339614 -52249674 - AluSg/x SINE Alu -16 296 184 314 309 12 29 chr10 93342212 93342446 -52246842 + GA-rich Low_complexity Low_complexity 1 229 0 787 274 149 19 chr10 93342878 93343254 -52246034 - L2 LINE L2 -13 3300 2876 4245 78 6 27 chr10 93343515 93344146 -52245142 + SVA Other Other 750 1367 -19 25 0 0 0 chr10 93344153 93344178 -52245110 + AT_rich Low_complexity Low_complexity 1 25 0 329 319 106 32 chr10 93346045 93346424 -52242864 - L2 LINE L2 -2076 1238 832 1839 164 0 14 chr10 93346476 93346769 -52242519 + AluJo SINE Alu 1 289 -23 1150 240 71 75 chr10 93347355 93347863 -52241425 - L1MDb LINE L1 -5149 1260 755 291 309 49 16 chr10 93348214 93348337 -52240951 - L1MDb LINE L1 -5923 473 347 5050 248 47 13 chr10 93348553 93350051 -52239237 + L1ME1 LINE L1 3452 4999 -1147 1028 228 98 16 chr10 93350043 93350350 -52238938 + L1ME1 LINE L1 5548 5879 -287 * 345 24 0 0 chr10 93351252 93351294 -52237994 + (CA)n Simple_repeat Simple_repeat 2 43 0 326 135 31 10 chr10 93351359 93351455 -52237833 + (CA)n Simple_repeat Simple_repeat 2 99 0 619 218 80 0 chr10 93351811 93351999 -52237289 + L1MDa LINE L1 1541 1743 -4797 2916 244 102 22 chr10 93352007 93352079 -52237209 + L1MDa LINE L1 2092 2157 -4383 2201 113 0 0 chr10 93352079 93352372 -52236916 + AluSg1 SINE Alu 1 293 -16 2916 244 102 22 chr10 93352372 93353888 -52235400 + L1MDa LINE L1 2157 3814 -2726 2282 123 3 0 chr10 93353891 93354201 -52235087 + AluSx SINE Alu 1 311 -1 395 144 0 96 chr10 93354736 93354840 -52234448 + Charlie3 DNA MER1_type 2609 2702 -8 1753 196 36 14 chr10 93354880 93355237 -52234051 + MLT1A1 LTR MaLR 1 365 0 436 207 181 9 chr10 93355237 93355353 -52233935 - MER69 DNA AcHobo -1090 136 1 249 321 96 21 chr10 93355410 93355597 -52233691 - L2 LINE L2 0 3313 3113 296 321 125 17 chr10 93355665 93355905 -52233383 - L2 LINE L2 -342 2972 2707 606 302 158 21 chr10 93356301 93356907 -52232381 - L2 LINE L2 -814 2500 1812 1538 94 0 19 chr10 93357045 93357258 -52232030 + AluSg/x SINE Alu 99 307 -3 429 252 65 0 chr10 93357355 93357494 -52231794 - L1ME4a LINE L1 0 6121 5974 309 253 23 11 chr10 93357623 93357710 -52231578 - L1ME4a LINE L1 -423 5698 5611 870 149 0 0 chr10 93358038 93358159 -52231129 - 5S rRNA rRNA 0 121 1 23 0 0 0 chr10 93358295 93358318 -52230970 + AT_rich Low_complexity Low_complexity 1 23 0 2361 250 34 20 chr10 93358349 93359006 -52230282 - L1MC4a LINE L1 -1841 5967 5302 315 270 82 41 chr10 93359292 93359488 -52229800 - L1MC4a LINE L1 -1198 4948 4745 24 0 0 0 chr10 93359490 93359514 -52229774 + AT_rich Low_complexity Low_complexity 1 24 0 918 100 0 0 chr10 93359518 93359638 -52229650 - AluSp/q SINE Alu -20 293 174 30 27 0 0 chr10 93360023 93360060 -52229228 + AT_rich Low_complexity Low_complexity 1 37 0 555 271 85 73 chr10 93360119 93360544 -52228744 - L1MC4a LINE L1 -1438 4708 4279 32 57 0 0 chr10 93360647 93360700 -52228588 + AT_rich Low_complexity Low_complexity 1 53 0 856 150 6 6 chr10 93361776 93361956 -52227332 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 445 325 84 13 chr10 93362153 93362390 -52226898 + MIR SINE MIR 2 255 -7 21 0 0 0 chr10 93362446 93362467 -52226821 + AT_rich Low_complexity Low_complexity 1 21 0 192 224 79 13 chr10 93364046 93364122 -52225166 - L2 LINE L2 -4 3268 3188 218 305 0 6 chr10 93364192 93364369 -52224919 + (CA)n Simple_repeat Simple_repeat 2 177 0 272 270 70 9 chr10 93364434 93364540 -52224748 + MIR SINE MIR 40 150 -63 526 289 122 48 chr10 93364620 93365053 -52224235 - L2 LINE L2 -1 3312 2848 1220 113 82 0 chr10 93365949 93366144 -52223144 - L1MB3 LINE L1 -12 6171 5961 514 253 12 25 chr10 93366244 93366406 -52222882 - MLT2D LTR ERVL -121 293 134 * 1788 167 55 9 chr10 93366394 93366742 -52222546 - MLT1C LTR MaLR -100 367 4 441 246 95 0 chr10 93369250 93369447 -52219841 + MIR SINE MIR 21 232 -30 193 319 35 9 chr10 93369566 93369679 -52219609 - L2 LINE L2 -1197 2117 2002 1345 70 0 0 chr10 93369716 93369873 -52219415 + AluSx SINE Alu 1 157 -155 2312 142 11 5 chr10 93370023 93370390 -52218898 - L1PA16 LINE L1 -31 6135 5767 2248 90 2 3 chr10 93370409 93370883 -52218405 - LTR9 LTR ERV1 -86 526 1 1480 106 5 0 chr10 93370883 93371081 -52218207 - HUERS-P3 LTR ERV1 -1 8918 8720 861 161 29 6 chr10 93371235 93371409 -52217879 - PABL_A-int LTR ERV1 -2450 2565 2388 5601 124 21 0 chr10 93371420 93372225 -52217063 - PABL_A-int LTR ERV1 -476 6942 6121 683 287 112 21 chr10 93372226 93372602 -52216686 - L2 LINE L2 -768 2546 2137 312 359 31 18 chr10 93373436 93373659 -52215629 + MIR SINE MIR 31 256 -6 2116 192 54 26 chr10 93374017 93374480 -52214808 + L1MB5 LINE L1 5698 6173 -1 229 325 0 0 chr10 93374881 93374958 -52214330 + L2 LINE L2 3192 3268 -4 376 306 98 11 chr10 93375878 93376061 -52213227 + MIR SINE MIR 44 242 -20 2460 129 6 6 chr10 93377835 93378199 -52211089 - THE1B LTR MaLR 0 364 1 374 114 25 5 chr10 93378239 93378307 -52210981 - THE1B LTR MaLR -60 366 258 592 279 167 9 chr10 93378539 93378869 -52210419 + L2 LINE L2 2422 2803 -511 751 144 16 0 chr10 93378970 93379095 -52210193 + L1ME1 LINE L1 5693 5819 -423 1257 134 0 85 chr10 93379095 93379342 -52209946 + AluJo SINE Alu 74 299 -13 1277 241 41 6 chr10 93379362 93379702 -52209586 + L1ME1 LINE L1 5815 6166 0 552 344 5 5 chr10 93379768 93379980 -52209308 + L2 LINE L2 2828 3039 -274 303 249 41 99 chr10 93380348 93380569 -52208719 + L2 LINE L2 3028 3235 -78 223 257 159 62 chr10 93380672 93380785 -52208503 + L2 LINE L2 3149 3272 0 205 365 0 0 chr10 93380783 93380879 -52208409 + MIR SINE MIR 166 261 -1 * 200 315 43 11 chr10 93380944 93381036 -52208252 - MIR SINE MIR -83 179 85 258 316 0 11 chr10 93381996 93382091 -52207197 + MIR SINE MIR 53 146 -62 759 299 149 14 chr10 93382293 93382735 -52206553 + L1ME4a LINE L1 5308 5809 -312 229 264 132 35 chr10 93382788 93382932 -52206356 + L1ME4a LINE L1 5881 6038 -83 265 247 112 59 chr10 93383343 93383513 -52205775 - L1ME4a LINE L1 -96 6025 5847 277 113 65 48 chr10 93383520 93383582 -52205706 - MLT2B3 LTR ERVL 0 520 458 572 115 35 0 chr10 93383582 93383695 -52205593 + (TAGA)n Simple_repeat Simple_repeat 1 117 0 274 223 212 24 chr10 93383704 93383857 -52205431 - L1P4 LINE L1 -642 5532 5353 1268 203 13 0 chr10 93383891 93384123 -52205165 - MLT2B3 LTR ERVL -63 491 257 3845 141 21 0 chr10 93384123 93384684 -52204604 - ERVL LTR ERVL -851 4913 4341 14168 179 21 10 chr10 93384782 93388657 -52200631 - L1PB1 LINE L1 0 6867 2947 6688 208 157 5 chr10 93389064 93390852 -52198436 - L1PB1 LINE L1 -4803 2060 1 799 135 0 115 chr10 93390856 93391048 -52198240 - L1MDa LINE L1 -4957 1583 1414 286 152 0 61 chr10 93391048 93391114 -52198174 - AluSc SINE Alu -1 298 237 313 287 10 10 chr10 93391118 93391219 -52198069 + T-rich Low_complexity Low_complexity 5 105 0 25424 45 3 6 chr10 93391320 93394415 -52194873 - L1P LINE L1 -3058 3088 2 1692 226 77 29 chr10 93394437 93394919 -52194369 + MLT1D LTR MaLR 1 505 0 481 281 111 5 chr10 93394927 93395126 -52194162 + L1ME3A LINE L1 1532 1751 -4645 471 296 64 7 chr10 93395517 93395797 -52193491 + L1ME3A LINE L1 2184 2479 -3736 2159 105 6 43 chr10 93395856 93396180 -52193108 + AluSx SINE Alu 1 312 0 488 278 83 20 chr10 93396439 93396741 -52192547 + L1ME3A LINE L1 5324 5644 -595 563 281 46 39 chr10 93396838 93397123 -52192165 + L1ME3A LINE L1 5656 5942 -297 191 322 164 13 chr10 93397127 93397279 -52192009 - MER5B DNA MER1_type 0 178 4 2016 150 53 3 chr10 93399622 93399962 -52189326 + MER47A DNA MER2_type 10 366 0 2196 151 47 32 chr10 93400492 93401032 -52188256 - MLT2A2 LTR ERVL 0 554 1 24718 31 3 0 chr10 93402037 93405727 -52183561 + L1PA4 LINE L1 2455 6147 -8 988 250 62 51 chr10 93405738 93406410 -52182878 - L1MEd LINE L1 -4862 1257 718 557 69 30 10 chr10 93406432 93406533 -52182755 + (TC)n Simple_repeat Simple_repeat 2 104 0 256 314 23 40 chr10 93409234 93409409 -52179879 + MLT1L LTR MaLR 444 615 0 21 36 0 0 chr10 93409805 93409833 -52179455 + AT_rich Low_complexity Low_complexity 1 28 0 639 227 147 6 chr10 93410395 93410558 -52178730 + MER5A DNA MER1_type 4 189 0 307 293 129 7 chr10 93410572 93410719 -52178569 + MIR SINE MIR 9 173 -89 297 382 0 7 chr10 93411632 93411776 -52177512 + CT-rich Low_complexity Low_complexity 5 147 0 3785 123 11 30 chr10 93412249 93412859 -52176429 - L1MA6 LINE L1 -258 6042 5444 1533 128 25 0 chr10 93412859 93413101 -52176187 - L1MA5A LINE L1 -1 6296 6049 3785 123 11 30 chr10 93413101 93413149 -52176139 - L1MA6 LINE L1 -856 5444 5397 1428 127 12 24 chr10 93413149 93413400 -52175888 + L1MA6 LINE L1 6052 6300 0 238 283 14 0 chr10 93413677 93413769 -52175519 + GA-rich Low_complexity Low_complexity 1 93 0 409 184 58 10 chr10 93414418 93414521 -52174767 + L1ME1 LINE L1 47 154 -6242 1780 228 42 68 chr10 93414607 93415339 -52173949 + L1ME1 LINE L1 625 1337 -5059 232 279 109 36 chr10 93415341 93415588 -52173700 + L1ME1 LINE L1 1413 1677 -4719 3839 236 42 41 chr10 93415595 93416823 -52172465 + L1ME1 LINE L1 3504 4732 -1483 421 205 12 0 chr10 93416842 93416925 -52172363 - MER96 DNA MER1_type? -91 84 1 805 267 46 72 chr10 93416925 93417270 -52172018 + L1ME1 LINE L1 4723 5058 -1157 * 893 223 76 45 chr10 93417260 93417595 -52171693 + L1ME1 LINE L1 5884 6231 -2 2018 134 21 0 chr10 93417677 93417968 -52171320 + AluSx SINE Alu 1 297 -15 204 40 0 0 chr10 93417968 93417993 -52171295 + (TA)n Simple_repeat Simple_repeat 2 26 0 704 272 81 28 chr10 93418105 93418388 -52170900 + L2 LINE L2 2496 2793 -521 319 325 118 18 chr10 93419324 93419493 -52169795 + MIR SINE MIR 2 187 -75 246 304 61 54 chr10 93419518 93419666 -52169622 + L1ME4a LINE L1 5327 5475 -646 679 266 52 4 chr10 93419797 93420030 -52169258 + L1ME4a LINE L1 5677 5920 -201 25 31 0 0 chr10 93420082 93420114 -52169174 + AT_rich Low_complexity Low_complexity 1 32 0 1774 135 62 24 chr10 93420567 93420908 -52168380 - L1MA8 LINE L1 -13 6278 5925 7329 142 42 5 chr10 93420909 93422091 -52167197 - Tigger3b DNA MER2_type 0 1231 7 2076 119 13 0 chr10 93422097 93422399 -52166889 - L1MA8 LINE L1 -366 5925 5620 251 288 0 0 chr10 93422545 93422604 -52166684 + MIR SINE MIR 189 247 -15 235 315 140 42 chr10 93423635 93423778 -52165510 + L2 LINE L2 3111 3267 -5 2039 60 0 12 chr10 93424146 93424461 -52164827 - AluY SINE Alu 0 348 37 477 329 60 17 chr10 93424471 93424705 -52164583 - MIR SINE MIR -13 249 6 1423 214 28 33 chr10 93425071 93425431 -52163857 - Tigger7 DNA MER2_type -1 2490 1 221 208 338 0 chr10 93425631 93425708 -52163580 + MIR SINE MIR 54 156 -106 2849 261 46 42 chr10 93425772 93426909 -52162379 + L2 LINE L2 1955 3091 -222 210 330 74 40 chr10 93426908 93427084 -52162204 + L2 LINE L2 3042 3223 -90 * 1197 255 21 28 chr10 93427126 93427514 -52161774 + L1ME1 LINE L1 51 435 -5961 * 8603 248 38 28 chr10 93427510 93430052 -52159236 + L1ME1 LINE L1 883 3445 -2770 2093 139 7 0 chr10 93430052 93430361 -52158927 - AluSx SINE Alu -1 311 1 8603 248 38 28 chr10 93430361 93431826 -52157462 + L1ME1 LINE L1 3445 4894 -1321 2936 219 57 37 chr10 93431830 93432876 -52156412 + L1ME1 LINE L1 5158 6230 -5 323 307 37 75 chr10 93434148 93434389 -52154899 - L2 LINE L2 -865 2449 2218 242 281 78 0 chr10 93435062 93435126 -52154162 - L2 LINE L2 -57 3215 3147 761 238 61 9 chr10 93436243 93436457 -52152831 + MIR SINE MIR 32 256 -6 2185 122 3 3 chr10 93436457 93436769 -52152519 + AluSx SINE Alu 1 312 0 465 250 9 11 chr10 93438156 93438736 -52150552 + (CA)n Simple_repeat Simple_repeat 1 579 0 241 257 57 122 chr10 93439723 93439968 -52149320 + L2 LINE L2 3084 3312 -1 222 325 205 21 chr10 93441040 93441274 -52148014 + L3 LINE CR1 639 915 -662 633 302 136 8 chr10 93441508 93441766 -52147522 + L3 LINE CR1 1179 1469 -108 315 350 15 15 chr10 93441854 93441991 -52147297 - MER5B DNA MER1_type 0 178 42 401 286 45 23 chr10 93442649 93442782 -52146506 + MIR3 SINE MIR 4 139 -69 191 231 77 0 chr10 93443214 93443266 -52146022 + MIR SINE MIR 157 212 -50 402 322 30 20 chr10 93444876 93445064 -52144224 - MIR SINE MIR -68 140 4 301 351 14 0 chr10 93446449 93446634 -52142654 - MIR SINE MIR -3 259 71 238 281 99 25 chr10 93446946 93447067 -52142221 + L2 LINE L2 3143 3272 0 599 231 17 0 chr10 93451129 93451246 -52138042 + FLAM_A SINE Alu 2 120 -13 263 349 53 24 chr10 93451663 93451832 -52137456 - L3 LINE CR1 -711 866 693 226 211 42 56 chr10 93452351 93452422 -52136866 + LTR67 LTR ERVL 428 497 -60 28 0 0 0 chr10 93452469 93452497 -52136791 + AT_rich Low_complexity Low_complexity 1 28 0 959 233 75 40 chr10 93452668 93453067 -52136221 - HAL1 LINE L1 -64 2443 2031 41 48 0 0 chr10 93453308 93453370 -52135918 + AT_rich Low_complexity Low_complexity 1 62 0 1775 291 99 49 chr10 93453499 93453789 -52135499 - HAL1 LINE L1 -701 1806 1532 1647 183 35 0 chr10 93453789 93454078 -52135210 - AluJb SINE Alu -11 301 3 1775 291 99 49 chr10 93454078 93455056 -52134232 - HAL1 LINE L1 -975 1532 474 1486 184 40 14 chr10 93455177 93455454 -52133834 - AluJo SINE Alu -28 284 1 253 303 38 97 chr10 93455455 93455640 -52133648 - HAL1 LINE L1 -2333 174 1 345 276 0 0 chr10 93455664 93455740 -52133548 + LTR67 LTR ERVL 482 557 0 1705 167 58 99 chr10 93455903 93456262 -52133026 + MSTD LTR MaLR 1 342 -54 871 164 0 0 chr10 93456262 93456390 -52132898 - L1PA15 LINE L1 -18 6147 6020 1705 167 58 99 chr10 93456390 93456443 -52132845 + MSTD LTR MaLR 342 396 0 387 0 0 0 chr10 93457362 93457405 -52131883 + (CA)n Simple_repeat Simple_repeat 2 44 0 401 309 62 19 chr10 93457997 93458207 -52131081 - MIR SINE MIR -8 254 36 878 264 31 12 chr10 93458587 93458841 -52130447 - MIR SINE MIR -1 261 3 544 325 58 65 chr10 93458883 93459160 -52130128 - L2 LINE L2 -12 3260 2986 180 111 0 0 chr10 93459467 93459494 -52129794 + (A)n Simple_repeat Simple_repeat 1 27 0 570 229 38 30 chr10 93460039 93460170 -52129118 - MER5B DNA MER1_type 0 178 47 227 313 108 48 chr10 93460436 93460602 -52128686 + L2 LINE L2 3044 3219 -53 971 181 13 66 chr10 93460606 93460832 -52128456 + MER20 DNA MER1_type 4 217 -2 638 245 87 15 chr10 93461377 93461573 -52127715 - MIR SINE MIR -6 256 47 1565 193 51 98 chr10 93462253 93462732 -52126556 - MLT1D LTR MaLR 0 505 52 2363 102 0 3 chr10 93462732 93463037 -52126251 + AluSx SINE Alu 1 304 -8 1565 193 51 98 chr10 93463037 93463087 -52126201 - MLT1D LTR MaLR -453 52 1 492 241 39 1 chr10 93464077 93464208 -52125080 + MIR SINE MIR 38 171 -70 555 242 55 87 chr10 93464228 93464517 -52124771 + L1ME4a LINE L1 5825 6104 -17 367 234 89 40 chr10 93466008 93466132 -52123156 - L1ME LINE L1 -381 5740 5611 424 250 46 0 chr10 93466487 93466595 -52122693 + MER8 DNA MER2_type 6 118 -121 305 156 0 0 chr10 93466586 93466631 -52122657 - Tigger2 DNA MER2_type -2672 46 2 * 1498 221 67 40 chr10 93466792 93467241 -52122047 + MLT1H LTR MaLR 82 542 -7 410 319 148 7 chr10 93467243 93467553 -52121735 + L1MC/D LINE L1 5363 5716 -2092 2296 228 55 88 chr10 93468046 93469239 -52120049 - Charlie7 DNA MER1_type -32 2580 1428 299 196 211 15 chr10 93469333 93469466 -52119822 - Charlie7 DNA MER1_type -2453 159 1 22 0 0 0 chr10 93470373 93470395 -52118893 + AT_rich Low_complexity Low_complexity 1 22 0 1011 170 56 70 chr10 93470971 93471241 -52118047 + L1MD3 LINE L1 7730 7995 0 451 283 66 47 chr10 93472219 93472537 -52116751 - L1ME4a LINE L1 -94 6027 5704 243 310 110 19 chr10 93472557 93472712 -52116576 + MIR SINE MIR 22 190 -72 232 180 20 0 chr10 93472797 93472847 -52116441 + GA-rich Low_complexity Low_complexity 2 52 0 683 153 8 0 chr10 93472854 93472985 -52116303 + (TGGA)n Simple_repeat Simple_repeat 2 133 0 309 271 60 38 chr10 93474866 93474999 -52114289 + LTR16A1 LTR ERVL 319 454 -3 1812 174 52 25 chr10 93475726 93476089 -52113199 + Tigger2a DNA MER2_type 1 373 -61 2352 54 30 0 chr10 93476106 93476401 -52112887 + L1PA13 LINE L1 5778 6081 -82 479 213 0 0 chr10 93476401 93476476 -52112812 + Tigger2a DNA MER2_type 360 434 0 202 322 0 0 chr10 93477736 93477806 -52111482 + MIR SINE MIR 57 126 -82 226 268 98 0 chr10 93479732 93479814 -52109474 - LTR67 LTR ERVL -11 546 457 2416 102 47 16 chr10 93479818 93480182 -52109106 - THE1C LTR MaLR 0 375 1 598 183 9 0 chr10 93481331 93481446 -52107842 + MLT2B2 LTR ERVL 1 116 -399 * 1012 179 11 11 chr10 93481440 93481624 -52107664 + MLT2B1 LTR ERVL 25 208 -312 1795 117 12 0 chr10 93481626 93481873 -52107415 + AluSp SINE Alu 3 252 -61 201 74 0 0 chr10 93482054 93482081 -52107207 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 815 225 57 16 chr10 93482081 93482352 -52106936 + MLT2B1 LTR ERVL 186 520 0 1930 263 29 19 chr10 93482504 93482958 -52106330 - L1ME2 LINE L1 -46 6118 5655 2059 123 0 72 chr10 93482958 93483292 -52105996 - AluSx SINE Alu -2 310 1 1930 263 29 19 chr10 93483292 93483415 -52105873 - L1ME2 LINE L1 -509 5655 5535 189 268 52 41 chr10 93484197 93484294 -52104994 + MIR SINE MIR 119 216 -46 730 187 9 12 chr10 93484599 93484936 -52104352 + CT-rich Low_complexity Low_complexity 1 335 0 620 227 6 0 chr10 93484970 93485146 -52104142 + GA-rich Low_complexity Low_complexity 2 178 0 3921 216 86 63 chr10 93487007 93487055 -52102233 + L1ME3 LINE L1 17 62 -6480 7707 82 6 0 chr10 93487055 93488889 -52100399 + L1PA7 LINE L1 4316 6152 -2 3921 216 86 63 chr10 93488889 93489624 -52099664 + L1ME3 LINE L1 62 779 -5763 2198 138 0 0 chr10 93489624 93489929 -52099359 + AluSx SINE Alu 1 305 -7 3921 216 86 63 chr10 93489929 93489990 -52099298 + L1ME3 LINE L1 779 837 -5705 2236 133 34 3 chr10 93489990 93490343 -52098945 + THE1B LTR MaLR 1 364 0 3921 216 86 63 chr10 93490343 93490777 -52098511 + L1ME3 LINE L1 837 1326 -5216 8787 231 63 19 chr10 93490777 93491262 -52098026 + L1ME3 LINE L1 1635 2098 -4546 2501 70 0 0 chr10 93491262 93491562 -52097726 + AluY SINE Alu 2 301 -10 8787 231 63 19 chr10 93491562 93494220 -52095068 + L1ME3 LINE L1 2098 4931 -1713 2422 241 23 37 chr10 93494289 93495187 -52094101 + L1ME3 LINE L1 5502 6389 -271 2546 237 62 38 chr10 93495457 93496513 -52092775 - L1MDa LINE L1 -5312 1228 8 248 262 107 0 chr10 93497416 93497519 -52091769 - L1MA4A LINE L1 -1 6302 6189 2349 155 17 72 chr10 93497524 93498041 -52091247 - L1MA4A LINE L1 -182 6121 5633 252 291 17 34 chr10 93498163 93498342 -52090946 + (TGAA)n Simple_repeat Simple_repeat 3 178 0 2521 160 40 7 chr10 93498484 93498928 -52090360 + MLT1C LTR MaLR 4 462 -5 216 204 37 0 chr10 93499288 93499342 -52089946 + L2 LINE L2 3202 3257 -15 258 136 109 64 chr10 93499597 93499707 -52089581 - MER113 DNA MER1_type? -398 123 9 368 67 0 67 chr10 93499773 93499833 -52089455 - MLT2D LTR ERVL 0 414 359 1842 161 40 37 chr10 93499947 93500326 -52088962 - L1MB3 LINE L1 -328 5855 5476 201 195 0 0 chr10 93500326 93500367 -52088921 + CT-rich Low_complexity Low_complexity 1 41 0 271 100 25 0 chr10 93500367 93500407 -52088881 - L1MB3 LINE L1 -683 5488 5448 219 336 98 27 chr10 93500407 93500663 -52088625 + L2 LINE L2 2996 3269 -3 327 323 127 50 chr10 93501587 93501909 -52087379 - L2 LINE L2 0 3272 2926 1003 309 133 41 chr10 93502227 93502500 -52086788 + L2 LINE L2 1095 1341 -1973 3499 151 58 5 chr10 93502500 93503116 -52086172 - L1MC2 LINE L1 0 6344 5696 1003 309 133 41 chr10 93503116 93503503 -52085785 + L2 LINE L2 1341 1816 -1498 195 241 0 0 chr10 93503561 93503615 -52085673 + L2 LINE L2 1787 1840 -1474 837 264 141 16 chr10 93503680 93504043 -52085245 + LTR16C LTR ERVL 84 491 0 306 194 0 0 chr10 93504250 93504312 -52084976 + G-rich Low_complexity Low_complexity 1 62 0 664 221 7 32 chr10 93504433 93504587 -52084701 - MER1B DNA MER1_type -117 180 31 1917 232 16 37 chr10 93504661 93505229 -52084059 + MER74A LTR ERVL 1 556 -2 214 287 116 69 chr10 93505666 93505969 -52083319 - L2 LINE L2 -1 3271 2955 197 357 51 0 chr10 93506023 93506121 -52083167 - L2 LINE L2 -49 3223 3121 289 303 92 17 chr10 93507171 93507290 -52081998 + L2 LINE L2 3186 3313 0 224 364 32 13 chr10 93507941 93508095 -52081193 - MIR SINE MIR -2 260 104 360 263 94 14 chr10 93508689 93508853 -52080435 + MIR SINE MIR 17 190 -72 1424 126 23 0 chr10 93508861 93509075 -52080213 + MER20 DNA MER1_type 1 219 0 282 331 54 12 chr10 93511269 93511435 -52077853 - MIR SINE MIR -11 251 79 339 282 73 60 chr10 93511460 93511694 -52077594 + L2 LINE L2 2550 2786 -528 622 155 20 68 chr10 93511701 93511849 -52077439 - L1MA9 LINE L1 -32 6280 6140 817 274 111 27 chr10 93511909 93512322 -52076966 + L2 LINE L2 2864 3311 -2 284 320 88 31 chr10 93513045 93513239 -52076049 - MIR SINE MIR -4 258 54 198 226 97 16 chr10 93513557 93513619 -52075669 + MIR SINE MIR 77 143 -65 322 232 61 0 chr10 93513681 93513763 -52075525 - L2 LINE L2 -1 3271 3185 441 343 9 19 chr10 93513963 93514176 -52075112 - L2 LINE L2 -525 2789 2579 551 191 53 15 chr10 93514275 93514406 -52074882 + MLT1B LTR MaLR 1 136 -254 306 250 13 0 chr10 93514909 93514985 -52074303 + MIR SINE MIR 67 143 -119 393 236 81 32 chr10 93516636 93516759 -52072529 - MIR SINE MIR -14 248 120 385 330 108 6 chr10 93518783 93518959 -52070329 + L3 LINE CR1 408 601 -976 1045 143 12 0 chr10 93518969 93519137 -52070151 + AluJo SINE Alu 13 182 -130 370 314 17 0 chr10 93519293 93519411 -52069877 + L3 LINE CR1 737 856 -721 408 315 16 0 chr10 93519437 93519564 -52069724 - MIR SINE MIR 0 262 134 302 0 26 0 chr10 93519565 93519603 -52069685 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 332 269 80 37 chr10 93519685 93519972 -52069316 + MLT1H LTR MaLR 85 387 -22 296 329 0 0 chr10 93519983 93520062 -52069226 - MIR SINE MIR -181 81 3 554 302 79 29 chr10 93520997 93521367 -52067921 + L1ME4a LINE L1 5494 5891 -230 231 137 41 0 chr10 93521403 93521476 -52067812 + (TA)n Simple_repeat Simple_repeat 2 77 0 180 301 41 0 chr10 93521823 93521896 -52067392 - MIR SINE MIR -139 123 48 213 324 117 0 chr10 93523628 93523739 -52065549 + MIR SINE MIR 133 256 -6 2258 101 0 0 chr10 93524103 93524411 -52064877 - AluSx SINE Alu -4 308 1 533 230 8 0 chr10 93524623 93524749 -52064539 + Charlie5 DNA MER1_type 1 127 -2485 * 1610 166 82 6 chr10 93524746 93525102 -52064186 + Charlie5 DNA MER1_type 2234 2616 0 964 211 19 10 chr10 93525323 93525532 -52063756 + L1MC1 LINE L1 6123 6333 0 180 0 0 0 chr10 93525972 93525992 -52063296 + (CAGG)n Simple_repeat Simple_repeat 1 20 0 271 160 107 13 chr10 93526097 93526172 -52063116 + L1ME3A LINE L1 6079 6160 -10 267 261 122 61 chr10 93526468 93526583 -52062705 - MIR SINE MIR -62 146 25 479 268 49 60 chr10 93527280 93527463 -52061825 + MIR SINE MIR 34 214 -48 199 269 8 118 chr10 93529808 93529927 -52059361 - MIR SINE MIR -110 152 47 303 206 32 0 chr10 93530023 93530086 -52059202 + L2 LINE L2 3206 3270 -2 424 175 39 39 chr10 93530403 93530506 -52058782 - L2 LINE L2 0 3313 3211 1760 64 0 0 chr10 93530675 93530893 -52058395 + AluY SINE Alu 82 299 -12 418 346 56 13 chr10 93530932 93531166 -52058122 + L2 LINE L2 594 837 -2477 979 273 72 74 chr10 93531789 93532273 -52057015 - L2 LINE L2 -3 3310 2828 2903 319 61 41 chr10 93532458 93534117 -52055171 - ERVL LTR ERVL -2142 3622 1927 1887 191 28 6 chr10 93534117 93534474 -52054814 - MLT1A1 LTR MaLR 0 365 1 2903 319 61 41 chr10 93534474 93534515 -52054773 - ERVL LTR ERVL -3837 1927 1888 288 153 0 17 chr10 93534900 93534959 -52054329 - AluSq SINE Alu -2 300 243 1501 117 0 0 chr10 93534959 93535165 -52054123 - AluSq SINE Alu -107 206 1 453 358 14 5 chr10 93535193 93535408 -52053880 - ERVL LTR ERVL -4483 1281 1065 549 238 16 16 chr10 93535627 93535753 -52053535 - L2 LINE L2 -1 3312 3187 1735 153 20 3 chr10 93536210 93536504 -52052784 - AluSx SINE Alu -13 299 1 415 331 39 0 chr10 93536672 93536799 -52052489 + L2 LINE L2 3182 3313 0 216 196 0 0 chr10 93536905 93536951 -52052337 - L2 LINE L2 -213 3059 3014 817 295 75 28 chr10 93537944 93538686 -52050602 - L1ME3A LINE L1 -305 5865 5086 282 29 0 0 chr10 93539189 93539224 -52050064 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 26 0 0 0 chr10 93539392 93539418 -52049870 + AT_rich Low_complexity Low_complexity 1 26 0 649 303 102 44 chr10 93540334 93540415 -52048873 - L1ME3A LINE L1 -1053 5093 5018 2204 83 3 0 chr10 93540415 93540704 -52048584 - AluSc SINE Alu -19 290 1 649 303 102 44 chr10 93540704 93541193 -52048095 - L1ME3A LINE L1 -1128 5018 4490 398 337 42 26 chr10 93543876 93544066 -52045222 + MIR SINE MIR 35 227 -35 1220 160 13 38 chr10 93544079 93544317 -52044971 + MER46A DNA MER2_type 4 235 -1 315 0 0 0 chr10 93544708 93544743 -52044545 + (TC)n Simple_repeat Simple_repeat 1 35 0 393 75 0 0 chr10 93544744 93544797 -52044491 + (TA)n Simple_repeat Simple_repeat 1 53 0 1810 183 42 22 chr10 93547247 93547603 -52041685 + MLT1A1 LTR MaLR 3 365 0 214 211 0 0 chr10 93549711 93549749 -52039539 + MIR SINE MIR 196 233 -29 320 309 12 0 chr10 93549913 93549997 -52039291 - L2 LINE L2 -1 3312 3228 864 156 0 0 chr10 93551237 93551417 -52037871 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 181 291 18 18 chr10 93551454 93551509 -52037779 - L2 LINE L2 -15 3257 3203 780 268 50 0 chr10 93553875 93554073 -52035215 + MER58A DNA MER1_type 1 208 -16 200 183 127 42 chr10 93554854 93554925 -52034363 - MIR SINE MIR -93 169 93 195 296 225 0 chr10 93555477 93555619 -52033669 - MIR SINE MIR -52 210 37 282 257 119 28 chr10 93555746 93555855 -52033433 + L2 LINE L2 3152 3270 -2 619 304 67 41 chr10 93561964 93562698 -52026590 - L1ME4a LINE L1 -22 6099 5347 620 289 122 39 chr10 93563242 93563554 -52025734 - MLT1L LTR MaLR -20 595 258 474 285 75 43 chr10 93563847 93564128 -52025160 - L1ME4a LINE L1 -2695 3451 3162 1563 193 33 0 chr10 93564147 93564447 -52024841 - AluSx SINE Alu -2 310 1 987 270 39 6 chr10 93564579 93564909 -52024379 - L1ME3A LINE L1 -13 6417 6077 706 158 188 24 chr10 93564914 93565079 -52024209 - MER74A LTR ERVL -1 557 366 1828 268 62 11 chr10 93565079 93565899 -52023389 - L1ME3A LINE L1 -1438 4968 4107 308 349 23 23 chr10 93565900 93566029 -52023259 - L1 LINE L1 -1331 4815 4687 4053 208 55 34 chr10 93566030 93566231 -52023057 - L1MD2 LINE L1 -3 6356 6161 405 0 0 0 chr10 93566231 93566276 -52023012 + (TG)n Simple_repeat Simple_repeat 2 46 0 4053 208 55 34 chr10 93566276 93567634 -52021654 - L1MD2 LINE L1 -198 6161 4756 1071 262 38 61 chr10 93567641 93568214 -52021074 - L1ME3A LINE L1 -2369 4037 3478 7454 171 11 2 chr10 93568214 93570364 -52018924 - L1PA13 LINE L1 -4 6810 4637 11574 209 41 10 chr10 93570364 93574439 -52014849 - L1PA13 LINE L1 -2431 4366 1 2753 242 69 18 chr10 93574450 93575030 -52014258 - L1ME3A LINE L1 -2921 3485 2936 2347 125 25 11 chr10 93575030 93575389 -52013899 - THE1B LTR MaLR 0 364 1 2753 242 69 18 chr10 93575389 93575863 -52013425 - L1ME3A LINE L1 -3470 2936 2377 3427 252 75 41 chr10 93575876 93578161 -52011127 - L1MDb LINE L1 -4248 2339 17 753 271 191 43 chr10 93578166 93579200 -52010088 - L1MDa LINE L1 -2290 3925 2739 12883 211 14 17 chr10 93579237 93583072 -52006216 - L1PA15 LINE L1 -1 6815 2966 4789 194 24 34 chr10 93583089 93584096 -52005192 - L1PA15 LINE L1 -4567 2220 1224 304 273 102 59 chr10 93584299 93584331 -52004957 - L1MDa LINE L1 -4086 2310 2281 225 0 0 0 chr10 93584331 93584356 -52004932 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2086 87 3 31 chr10 93584357 93584645 -52004643 - AluSx SINE Alu -32 280 1 304 273 102 59 chr10 93584645 93584797 -52004491 - L1MDa LINE L1 -4114 2282 2116 21 36 0 0 chr10 93584805 93584833 -52004455 + AT_rich Low_complexity Low_complexity 1 28 0 5723 121 23 9 chr10 93585152 93586136 -52003152 + L1PB3 LINE L1 5149 6147 -7 1918 129 0 56 chr10 93586178 93586515 -52002773 + AluSx SINE Alu 1 320 0 298 307 106 50 chr10 93586683 93587322 -52001966 - L1MDa LINE L1 -4518 1697 1103 352 231 22 0 chr10 93587358 93587449 -52001839 - L1MB8 LINE L1 0 6178 6086 7554 44 0 0 chr10 93587493 93588970 -52000318 - L1PA5 LINE L1 0 6154 4678 195 129 0 0 chr10 93588990 93589021 -52000267 + (CATATA)n Simple_repeat Simple_repeat 4 34 0 294 29 0 0 chr10 93589145 93589180 -52000108 + (T)n Simple_repeat Simple_repeat 1 35 0 223 238 71 12 chr10 93589567 93589651 -51999637 + MIR SINE MIR 84 172 -90 1676 201 42 42 chr10 93589796 93589825 -51999463 - MLT2D LTR ERVL -10 404 376 246 32 0 0 chr10 93589825 93589856 -51999432 + (TG)n Simple_repeat Simple_repeat 2 32 0 1676 201 42 42 chr10 93589856 93590230 -51999058 - MLT2D LTR ERVL -37 377 1 600 218 69 6 chr10 93590364 93590538 -51998750 + MIR SINE MIR 2 186 -76 307 231 91 56 chr10 93590752 93590895 -51998393 - L1ME LINE L1 -648 5514 5367 269 248 74 50 chr10 93591318 93591439 -51997849 + L2 LINE L2 3146 3269 -3 244 230 58 46 chr10 93591685 93591772 -51997516 + L2 LINE L2 3225 3312 -1 1104 213 70 91 chr10 93592356 93592741 -51996547 + MLT1C LTR MaLR 1 377 -90 247 328 68 71 chr10 93594409 93594848 -51994440 + L2 LINE L2 2823 3260 -12 215 306 59 0 chr10 93595052 93595137 -51994151 - MIR SINE MIR -122 140 51 298 258 73 48 chr10 93595625 93595749 -51993539 + L2 LINE L2 3140 3266 -6 2327 68 0 0 chr10 93596822 93597123 -51992165 - AluY SINE Alu 0 301 1 476 307 44 22 chr10 93598241 93598469 -51990819 + MIR SINE MIR 24 256 -6 953 260 71 20 chr10 93598494 93598907 -51990381 - LTR16A1 LTR ERVL -3 454 2 234 277 53 11 chr10 93599860 93599954 -51989334 - MIR SINE MIR -118 144 47 * 367 203 148 23 chr10 93599918 93600046 -51989242 + MIR SINE MIR 6 149 -113 236 292 92 8 chr10 93600826 93600946 -51988342 - L2 LINE L2 -5 3267 3138 873 227 22 0 chr10 93601133 93601318 -51987970 - MER5A DNA MER1_type 0 189 1 437 326 43 26 chr10 93601336 93601566 -51987722 - MER102a DNA MER1_type -3 327 94 239 224 15 15 chr10 93602215 93602282 -51987006 + MIR SINE MIR 84 150 -112 683 266 23 6 chr10 93602499 93602676 -51986612 - MER58A DNA MER1_type 0 224 45 291 304 35 0 chr10 93603932 93604047 -51985241 - LTR16C LTR ERVL -11 480 362 222 91 0 0 chr10 93604193 93604226 -51985062 + (TG)n Simple_repeat Simple_repeat 1 33 0 1053 92 14 0 chr10 93604493 93604634 -51984654 + MER107 DNA MER1_type 2 144 -53 182 88 0 29 chr10 93604634 93604668 -51984620 + (CAAAA)n Simple_repeat Simple_repeat 1 33 0 423 251 110 66 chr10 93607381 93607744 -51981544 + L2 LINE L2 2928 3306 -7 380 238 66 8 chr10 93608370 93608492 -51980796 + LTR16C LTR ERVL 363 491 0 288 338 60 41 chr10 93608533 93608850 -51980438 - L2 LINE L2 -8 3305 2983 350 319 0 0 chr10 93610174 93610287 -51979001 + MIR3 SINE MIR 84 196 -12 1775 167 0 113 chr10 93610472 93610709 -51978579 - MLT1A2 LTR MaLR -7 367 105 240 35 0 0 chr10 93610709 93610738 -51978550 + (TTCTCC)n Simple_repeat Simple_repeat 3 31 0 2142 102 0 0 chr10 93610746 93611012 -51978276 - AluSx SINE Alu -28 284 19 1775 167 0 113 chr10 93611012 93611179 -51978109 - MLT1A2 LTR MaLR -276 98 1 1740 204 113 39 chr10 93611228 93611739 -51977549 - MLT1H LTR MaLR 0 549 1 444 323 0 0 chr10 93612555 93612688 -51976600 + (TG)n Simple_repeat Simple_repeat 2 134 0 426 318 63 16 chr10 93613168 93613357 -51975931 + MIR SINE MIR 45 242 -20 214 352 23 0 chr10 93613365 93613453 -51975835 - MIR SINE MIR -74 188 99 180 0 0 0 chr10 93615443 93615463 -51973825 + (T)n Simple_repeat Simple_repeat 1 20 0 2630 156 10 38 chr10 93615844 93616344 -51972944 - MER66B LTR ERV1 0 486 1 215 194 0 29 chr10 93616650 93616712 -51972576 + CT-rich Low_complexity Low_complexity 1 60 0 736 267 21 0 chr10 93617018 93617209 -51972079 + MIR SINE MIR 13 207 -55 272 264 118 0 chr10 93617260 93617370 -51971918 + L2 LINE L2 3187 3309 -4 318 235 15 0 chr10 93618101 93618169 -51971119 - L2 LINE L2 -5 3267 3199 206 329 24 0 chr10 93618928 93619013 -51970275 - L3b LINE CR1 -188 1395 1309 1716 182 3 14 chr10 93619221 93619518 -51969770 - AluJb SINE Alu -16 296 3 386 281 42 27 chr10 93620634 93620770 -51968518 - MIR SINE MIR -66 142 7 4204 129 35 31 chr10 93621436 93622209 -51967079 - L1MA6 LINE L1 -10 6290 5515 190 357 21 29 chr10 93622261 93622401 -51966887 - L2 LINE L2 -31 3241 3103 631 266 15 59 chr10 93623987 93624088 -51965200 - MER63A DNA MER1_type -1494 194 105 2599 129 13 0 chr10 93624088 93624469 -51964819 - MLT1B LTR MaLR -1 389 4 631 266 15 59 chr10 93624469 93624570 -51964718 - MER63A DNA MER1_type -1583 105 1 254 278 22 22 chr10 93624797 93624887 -51964401 - MIR SINE MIR 0 262 173 24 91 0 0 chr10 93626587 93626653 -51962635 + AT_rich Low_complexity Low_complexity 1 66 0 364 245 32 11 chr10 93626682 93626776 -51962512 + L2 LINE L2 3176 3271 -1 247 93 23 0 chr10 93677494 93677537 -51911751 - LTR9 LTR ERV1 -568 44 1 1638 154 0 22 chr10 93678622 93678894 -51910394 - AluSx SINE Alu -35 277 12 562 322 105 34 chr10 93678981 93679787 -51909501 - L2 LINE L2 -130 3142 2240 203 258 32 0 chr10 93680118 93680180 -51909108 + (TCCA)n Simple_repeat Simple_repeat 3 66 0 884 171 8 0 chr10 93680195 93680459 -51908829 + (TCCA)n Simple_repeat Simple_repeat 1 266 0 240 246 18 0 chr10 93680512 93680569 -51908719 - L2 LINE L2 -2 3270 3213 316 273 0 13 chr10 93682142 93682219 -51907069 - L2 LINE L2 0 3272 3197 243 311 39 19 chr10 93682273 93682376 -51906912 - L2 LINE L2 -250 3022 2918 360 257 128 29 chr10 93682838 93683047 -51906241 - MIR SINE MIR -21 241 3 187 236 28 0 chr10 93684667 93684739 -51904549 + (TGGA)n Simple_repeat Simple_repeat 1 74 0 298 324 169 0 chr10 93685215 93685357 -51903931 + L2 LINE L2 3101 3266 -6 919 121 29 0 chr10 93685828 93686002 -51903286 - L1 LINE L1 -1318 4828 4650 270 290 61 23 chr10 93686576 93686707 -51902581 + L2 LINE L2 3136 3271 -1 23 33 0 0 chr10 93687629 93687659 -51901629 + AT_rich Low_complexity Low_complexity 1 30 0 222 37 0 0 chr10 93687783 93687810 -51901478 + (TG)n Simple_repeat Simple_repeat 1 27 0 415 321 94 41 chr10 93687862 93688226 -51901062 - L1M4c LINE L1 -1313 1430 851 555 284 44 31 chr10 93688775 93689000 -51900288 - MIR SINE MIR -21 241 14 461 238 86 20 chr10 93689682 93689833 -51899455 - MIR SINE MIR -79 183 23 199 234 0 21 chr10 93689955 93690002 -51899286 + L2 LINE L2 3210 3255 -17 205 283 0 0 chr10 93690013 93690059 -51899229 + L2 LINE L2 3193 3238 -75 199 224 104 0 chr10 93690412 93690479 -51898809 + L2 LINE L2 3234 3307 -6 347 323 139 0 chr10 93690523 93690681 -51898607 - MIR SINE MIR -74 188 9 375 302 16 8 chr10 93692143 93692272 -51897016 + MIR SINE MIR 20 149 -113 889 132 110 16 chr10 93692572 93692754 -51896534 - L1PA16 LINE L1 0 6166 5968 312 273 16 55 chr10 93692976 93693104 -51896184 - MIR SINE MIR -120 142 20 257 237 160 46 chr10 93695770 93695901 -51893387 - MLT1H LTR MaLR -2 547 402 1872 137 18 0 chr10 93696714 93696999 -51892289 + AluJb SINE Alu 23 312 0 185 318 48 0 chr10 93697003 93697066 -51892222 - MIR SINE MIR -109 153 88 419 331 101 6 chr10 93699485 93699663 -51889625 + MLT1K LTR MaLR 340 534 -54 860 222 5 25 chr10 93701157 93701360 -51887928 - MER3 DNA MER1_type 0 209 11 192 125 0 0 chr10 93702222 93702254 -51887034 + (CA)n Simple_repeat Simple_repeat 1 32 0 800 230 28 6 chr10 93702988 93703199 -51886089 - MIR SINE MIR -14 248 33 273 255 144 46 chr10 93703191 93703344 -51885944 + MIR SINE MIR 30 197 -65 * 313 262 57 22 chr10 93704340 93704480 -51884808 - MIR SINE MIR -59 149 39 667 190 196 0 chr10 93705308 93705487 -51883801 + MIR SINE MIR 43 256 -6 22 0 0 0 chr10 93705487 93705509 -51883779 + AT_rich Low_complexity Low_complexity 1 22 0 384 302 8 16 chr10 93705660 93705786 -51883502 - MIR SINE MIR -61 147 23 990 181 6 5 chr10 93706343 93706557 -51882731 - L1MB7 LINE L1 -217 5953 5740 190 264 207 0 chr10 93706559 93706646 -51882642 - MIR SINE MIR -147 115 11 341 304 74 74 chr10 93707130 93707164 -51882124 - L1MC4 LINE L1 -195 7847 7814 1830 161 13 10 chr10 93707164 93707475 -51881813 - AluJo SINE Alu 0 312 1 341 304 74 74 chr10 93707475 93707710 -51881578 - L1MC4 LINE L1 -227 7815 7578 5040 39 0 2 chr10 93707717 93708308 -51880980 - L1PA3 LINE L1 0 6155 5566 5765 27 1 0 chr10 93708308 93709204 -51880084 + L1PA3 LINE L1 4665 5561 -594 344 316 88 23 chr10 93709528 93709743 -51879545 + L2 LINE L2 1687 1915 -1399 194 343 41 0 chr10 93709760 93709833 -51879455 + L2 LINE L2 3195 3270 -2 284 216 185 6 chr10 93709856 93710018 -51879270 - AluSc SINE Alu -7 292 102 500 194 50 134 chr10 93710179 93710380 -51878908 - LTR33 LTR ERVL -272 249 66 713 267 96 24 chr10 93710475 93710808 -51878480 - LTR16A1 LTR ERVL -99 358 2 230 210 48 32 chr10 93711809 93711871 -51877417 - MIR3 SINE MIR -47 161 99 206 296 0 0 chr10 93712559 93712613 -51876675 - MIR SINE MIR -110 152 99 191 363 93 11 chr10 93714869 93715051 -51874237 + MIR SINE MIR 35 231 -31 222 62 0 0 chr10 93715604 93715636 -51873652 + (GAAA)n Simple_repeat Simple_repeat 3 34 0 240 298 113 32 chr10 93716261 93716385 -51872903 - MIR SINE MIR -109 153 20 328 139 125 0 chr10 93717026 93717098 -51872190 - MIR SINE MIR -79 183 103 342 388 36 0 chr10 93717117 93717336 -51871952 - MIR SINE MIR -3 259 33 415 289 44 7 chr10 93717477 93717612 -51871676 + (CATG)n Simple_repeat Simple_repeat 3 142 0 276 238 0 99 chr10 93718959 93719140 -51870148 + (CTACT)n Simple_repeat Simple_repeat 4 166 0 220 369 6 13 chr10 93719822 93719979 -51869309 + G-rich Low_complexity Low_complexity 3 158 0 234 331 8 8 chr10 93720018 93720142 -51869146 + GA-rich Low_complexity Low_complexity 1 124 0 229 256 0 51 chr10 93720160 93720238 -51869050 + C-rich Low_complexity Low_complexity 1 74 0 271 285 62 69 chr10 93721372 93721502 -51867786 + L2 LINE L2 3138 3266 -6 369 239 0 0 chr10 93721522 93721639 -51867649 + (TGGA)n Simple_repeat Simple_repeat 3 119 0 602 214 0 16 chr10 93721651 93721833 -51867455 + (TGGG)n Simple_repeat Simple_repeat 1 179 0 628 262 142 0 chr10 93722911 93723136 -51866152 + MIR SINE MIR 3 259 -3 315 331 12 12 chr10 93724273 93724436 -51864852 + (TG)n Simple_repeat Simple_repeat 1 163 0 213 232 0 0 chr10 93724459 93724528 -51864760 + (TG)n Simple_repeat Simple_repeat 2 70 0 271 279 20 91 chr10 93724769 93725066 -51864222 - L2 LINE L2 -153 3119 2844 410 138 131 0 chr10 93725698 93725806 -51863482 - MIR SINE MIR -65 143 37 414 300 88 35 chr10 93725844 93726071 -51863217 - MIR SINE MIR -18 244 6 467 268 73 12 chr10 93726210 93726374 -51862914 + MER5B DNA MER1_type 5 178 0 1422 232 103 48 chr10 93727732 93727841 -51861447 - L1M4 LINE L1 -1711 4933 4831 1610 180 37 17 chr10 93727841 93728135 -51861153 - AluJo SINE Alu -12 300 1 1422 232 103 48 chr10 93728135 93728707 -51860581 - L1M4 LINE L1 -1813 4831 4215 727 147 0 9 chr10 93729134 93729250 -51860038 - MLT1A1 LTR MaLR -246 119 5 2081 244 25 6 chr10 93729258 93729900 -51859388 - L1M4 LINE L1 -2441 4203 3550 564 222 89 30 chr10 93729899 93730212 -51859076 - L1M4 LINE L1 -3723 2921 2596 * 299 200 0 0 chr10 93730212 93730282 -51859006 - L1M4 LINE L1 -3981 2665 2596 367 143 0 0 chr10 93730282 93730352 -51858936 - L1M4 LINE L1 -3981 2665 2596 1777 191 41 13 chr10 93730352 93730987 -51858301 - L1M4 LINE L1 -3981 2665 1914 1756 143 6 12 chr10 93730987 93731308 -51857980 - L1MB3 LINE L1 0 6183 5865 1777 191 41 13 chr10 93731308 93731451 -51857837 - L1M4 LINE L1 -4732 1914 1776 1989 129 45 3 chr10 93731452 93731738 -51857550 + AluSx SINE Alu 1 298 -14 1608 176 9 102 chr10 93731757 93732178 -51857110 + MLT1B LTR MaLR 9 390 0 1197 171 12 4 chr10 93732178 93732418 -51856870 - L1M4 LINE L1 -4867 1779 1538 4149 193 27 8 chr10 93733937 93734869 -51854419 - L1ME1 LINE L1 -5 6161 5214 444 111 148 12 chr10 93735702 93735783 -51853505 + MLT1B LTR MaLR 1 92 -375 1778 138 143 51 chr10 93735783 93735966 -51853322 + MSTA LTR MaLR 1 166 -262 2477 78 0 0 chr10 93735966 93736260 -51853028 + AluY SINE Alu 5 298 -13 1778 138 143 51 chr10 93736260 93736468 -51852820 + MSTA LTR MaLR 166 428 0 813 116 0 0 chr10 93736470 93736599 -51852689 + MSTA-int LTR MaLR 3 131 -1520 * 6517 142 23 28 chr10 93736593 93736922 -51852366 + MSTA-int LTR MaLR 433 762 -818 2254 113 0 32 chr10 93736922 93737233 -51852055 + AluSc SINE Alu 1 301 -8 6517 142 23 28 chr10 93737233 93738056 -51851232 + MSTA-int LTR MaLR 762 1580 0 1726 160 169 5 chr10 93738056 93738424 -51850864 + MSTA LTR MaLR 1 428 0 1164 112 10 25 chr10 93738424 93738621 -51850667 + MLT1B LTR MaLR 88 281 -109 2574 247 74 87 chr10 93738723 93739616 -51849672 - L1M4 LINE L1 -4944 1598 732 10779 21 1 1 chr10 93739616 93741692 -51847596 + L1PA3 LINE L1 4078 6155 0 2574 247 74 87 chr10 93741692 93742404 -51846884 - L1M4 LINE L1 -5810 732 13 2704 248 88 15 chr10 93742409 93743415 -51845873 - L1MEc LINE L1 -4759 1637 559 445 339 0 6 chr10 93743863 93744043 -51845245 + (CA)n Simple_repeat Simple_repeat 1 179 0 265 247 14 0 chr10 93744093 93744166 -51845122 + (CA)n Simple_repeat Simple_repeat 1 74 0 831 155 128 16 chr10 93745633 93745820 -51843468 - MER6B DNA MER2_type -2 208 1 188 140 228 18 chr10 93746068 93746125 -51843163 - MIR SINE MIR -71 191 123 381 245 95 14 chr10 93746468 93746615 -51842673 + MIR SINE MIR 8 166 -96 822 310 78 39 chr10 93749640 93750150 -51839138 + MLT1K LTR MaLR 59 588 0 1898 153 3 21 chr10 93750348 93750672 -51838616 + AluSx SINE Alu 1 319 0 180 214 36 18 chr10 93751507 93751563 -51837725 + L2 LINE L2 2993 3049 -223 332 266 13 38 chr10 93752851 93753009 -51836279 + CT-rich Low_complexity Low_complexity 4 157 0 282 195 19 44 chr10 93753036 93753195 -51836093 + T-rich Low_complexity Low_complexity 5 159 0 289 256 7 102 chr10 93753579 93753716 -51835572 - L1MEc LINE L1 -6236 160 37 2267 127 0 0 chr10 93753721 93754028 -51835260 - AluSx SINE Alu -3 309 3 22 0 0 0 chr10 93754031 93754053 -51835235 + AT_rich Low_complexity Low_complexity 1 22 0 228 256 178 0 chr10 93754176 93754266 -51835022 - L2 LINE L2 -22 3250 3145 396 310 82 27 chr10 93755249 93755433 -51833855 - MIR SINE MIR -41 221 28 2275 117 3 0 chr10 93755438 93755738 -51833550 - AluSx SINE Alu -11 301 1 689 281 113 15 chr10 93755955 93756229 -51833059 - MLT1I LTR MaLR -28 381 81 270 270 144 60 chr10 93757119 93757308 -51831980 + MIR SINE MIR 15 211 -11 238 273 39 13 chr10 93757314 93757391 -51831897 - L2 LINE L2 0 3313 3235 443 215 279 6 chr10 93758896 93759068 -51830220 + MIR SINE MIR 12 230 -32 589 93 28 37 chr10 93760076 93760183 -51829105 - AluSp SINE Alu -130 183 78 1404 137 0 5 chr10 93760183 93760394 -51828894 - AluSg SINE Alu -100 210 1 398 317 120 62 chr10 93760406 93761081 -51828207 - L2 LINE L2 -38 3275 2563 219 36 0 0 chr10 93761620 93761648 -51827640 + (GA)n Simple_repeat Simple_repeat 1 28 0 183 129 0 0 chr10 93761998 93762029 -51827259 + (TG)n Simple_repeat Simple_repeat 1 31 0 300 309 121 0 chr10 93763648 93763797 -51825491 - MIR SINE MIR -33 229 63 182 308 15 15 chr10 93764543 93764608 -51824680 - MIR SINE MIR -60 148 84 370 309 103 0 chr10 93766085 93766221 -51823067 + L2 LINE L2 3164 3313 0 3013 216 61 34 chr10 93767228 93767598 -51821690 - L1ME1 LINE L1 -5 6161 5803 2100 128 3 0 chr10 93767598 93767917 -51821371 - AluSq SINE Alu 0 320 1 3013 216 61 34 chr10 93767917 93768947 -51820341 - L1ME1 LINE L1 -363 5803 4732 226 247 35 12 chr10 93768958 93769043 -51820245 + L1M4 LINE L1 4186 4272 -1874 273 355 192 4 chr10 93770716 93770950 -51818338 - L2 LINE L2 0 3272 2995 214 299 9 65 chr10 93773461 93773568 -51815720 + MIR SINE MIR 40 140 -68 324 70 0 0 chr10 93773820 93773863 -51815425 + (GGA)n Simple_repeat Simple_repeat 2 44 0 485 272 141 5 chr10 93775266 93775457 -51813831 - MIR SINE MIR -39 223 7 234 0 0 0 chr10 93775579 93775605 -51813683 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 218 273 156 23 chr10 93775725 93775853 -51813435 - MIR3 SINE MIR -61 147 3 5118 96 24 21 chr10 93776851 93777640 -51811648 + SVA Other Other 596 1386 0 324 264 107 44 chr10 93778261 93778420 -51810868 - MIR SINE MIR -73 189 21 837 161 70 54 chr10 93780611 93780797 -51808491 + MER5A DNA MER1_type 1 189 0 275 238 0 16 chr10 93780797 93780860 -51808428 + MER5B DNA MER1_type 17 78 -100 958 173 0 0 chr10 93782595 93782745 -51806543 + FRAM SINE Alu 4 153 -13 189 74 0 0 chr10 93782862 93782889 -51806399 + (TC)n Simple_repeat Simple_repeat 2 28 0 460 272 66 5 chr10 93783026 93783332 -51805956 + LTR33 LTR ERVL 50 417 -104 748 314 166 16 chr10 93783478 93784124 -51805164 + L3 LINE CR1 497 1282 -295 1001 278 81 30 chr10 93784683 93785017 -51804271 - MLT1I LTR MaLR 0 409 59 212 59 29 0 chr10 93785607 93785641 -51803647 + (TC)n Simple_repeat Simple_repeat 1 35 0 333 271 16 0 chr10 93785857 93785986 -51803302 + (TG)n Simple_repeat Simple_repeat 1 131 0 278 50 25 0 chr10 93786819 93786859 -51802429 + (TTCA)n Simple_repeat Simple_repeat 2 42 0 24 53 0 0 chr10 93786983 93787021 -51802267 + AT_rich Low_complexity Low_complexity 1 38 0 1815 272 170 37 chr10 93787330 93788709 -51800579 - L2 LINE L2 -491 2823 1261 1928 131 0 0 chr10 93789537 93789806 -51799482 + AluSx SINE Alu 18 287 -21 690 55 0 0 chr10 93789806 93789897 -51799391 + (CATA)n Simple_repeat Simple_repeat 2 92 0 327 309 90 27 chr10 93789908 93790697 -51798591 + L1ME4a LINE L1 4321 5162 -984 479 278 119 49 chr10 93790921 93791331 -51797957 + L1ME4a LINE L1 5432 5870 -251 220 313 45 18 chr10 93792082 93792194 -51797094 - MIR SINE MIR -57 205 91 439 246 16 8 chr10 93792275 93792397 -51796891 - L1MA9 LINE L1 -237 6075 5953 1637 35 0 10 chr10 93792398 93792597 -51796691 - L1PA5 LINE L1 0 6154 5958 791 56 0 0 chr10 93792597 93792705 -51796583 + L1PA5 LINE L1 5860 5967 -187 871 215 81 16 chr10 93793003 93793250 -51796038 + MLT1C LTR MaLR 8 270 -197 204 308 0 0 chr10 93793976 93794041 -51795247 + G-rich Low_complexity Low_complexity 3 67 0 234 0 0 0 chr10 93794047 93794073 -51795215 + (GGGGA)n Simple_repeat Simple_repeat 3 28 0 346 296 0 20 chr10 93794444 93794542 -51794746 + MIR SINE MIR 21 116 -146 827 274 96 37 chr10 93796135 93796306 -51792982 + L1MC5 LINE L1 7329 7489 -472 575 210 167 25 chr10 93796306 93796468 -51792820 + MER5A DNA MER1_type 4 188 -1 827 274 96 37 chr10 93796468 93796861 -51792427 + L1MC5 LINE L1 7489 7926 -35 365 288 125 17 chr10 93797027 93797243 -51792045 - MIR SINE MIR -14 248 10 1324 127 42 32 chr10 93797814 93798097 -51791191 + L1MA8 LINE L1 6004 6289 -2 231 225 138 0 chr10 93798212 93798298 -51790990 + MIR SINE MIR 74 140 -68 1642 202 36 25 chr10 93799981 93800342 -51788946 + MLT1A1 LTR MaLR 1 365 0 256 301 72 11 chr10 93800351 93800505 -51788783 - MIR SINE MIR -15 247 20 180 414 23 0 chr10 93801981 93802114 -51787174 + MIR SINE MIR 90 225 -37 1284 174 87 10 chr10 93802642 93802930 -51786358 - MER63 DNA MER1_type -5 1055 746 334 253 44 11 chr10 93803636 93803727 -51785561 - MIR SINE MIR -71 191 98 225 269 0 30 chr10 93803936 93804003 -51785285 + L2 LINE L2 3188 3252 -20 475 282 164 10 chr10 93804213 93804408 -51784880 - MIR SINE MIR -32 230 6 243 298 178 50 chr10 93805536 93805778 -51783510 + MLT1K LTR MaLR 16 288 -300 302 335 67 73 chr10 93807517 93807696 -51781592 + MIR SINE MIR 11 188 -74 972 181 145 35 chr10 93808099 93808246 -51781042 + MER33 DNA MER1_type 4 133 -2452 2071 51 0 4 chr10 93808246 93808502 -51780786 - AluY SINE Alu -17 294 40 972 181 145 35 chr10 93808502 93808621 -51780667 + MER33 DNA MER1_type 133 305 -2280 1382 143 119 108 chr10 93808621 93808964 -51780324 + MER7A DNA MER2_type 1 345 -1 972 181 145 35 chr10 93808964 93808978 -51780310 + MER33 DNA MER1_type 305 316 -8 679 275 54 1 chr10 93809055 93809265 -51780023 + MIR SINE MIR 21 244 -18 630 197 0 0 chr10 93809273 93809420 -51779868 + (CAT)n Simple_repeat Simple_repeat 2 148 0 607 286 97 9 chr10 93810009 93810226 -51779062 - MIR SINE MIR -9 253 18 194 305 113 20 chr10 93810749 93810940 -51778348 - MIR SINE MIR -9 253 44 21 0 0 0 chr10 93811450 93811471 -51777817 + AT_rich Low_complexity Low_complexity 1 21 0 787 87 9 17 chr10 93812865 93812980 -51776308 - L1PA5 LINE L1 0 6154 6041 189 348 122 0 chr10 93813192 93813356 -51775932 - MIR SINE MIR -9 253 70 434 321 118 41 chr10 93813884 93814199 -51775089 - L2 LINE L2 0 3272 2934 1084 31 0 0 chr10 93815567 93815695 -51773593 - L1PA5 LINE L1 -1 6153 6026 1267 78 21 0 chr10 93815695 93815888 -51773400 + L1P LINE L1 5185 5381 -765 386 300 94 29 chr10 93815904 93816074 -51773214 - MIR SINE MIR -21 241 61 229 288 62 25 chr10 93817048 93817128 -51772160 - MIR SINE MIR -62 200 118 354 333 129 5 chr10 93817622 93817808 -51771480 + MIR SINE MIR 2 210 -52 737 199 41 0 chr10 93818761 93818907 -51770381 + MER63 DNA MER1_type 1 778 -58 250 287 238 14 chr10 93819753 93819896 -51769392 + MIR SINE MIR 51 225 -37 255 79 0 0 chr10 93820103 93820141 -51769147 + (CA)n Simple_repeat Simple_repeat 2 39 0 301 347 90 18 chr10 93820473 93820640 -51768648 - MER5A DNA MER1_type 0 189 11 302 231 20 102 chr10 93821591 93821738 -51767550 + L1M4 LINE L1 4226 4360 -1786 5459 237 54 11 chr10 93821741 93823399 -51765889 - L1M4 LINE L1 -1391 4755 3026 427 337 24 6 chr10 93823440 93823609 -51765679 + MIR SINE MIR 73 244 -18 464 304 37 0 chr10 93823987 93824122 -51765166 + MIR SINE MIR 20 159 -103 * 554 299 120 4 chr10 93824113 93824347 -51764941 - MIR SINE MIR 0 262 2 238 262 193 14 chr10 93825617 93825762 -51763526 - MIR SINE MIR -44 218 48 284 68 0 23 chr10 93826365 93826409 -51762879 + (CA)n Simple_repeat Simple_repeat 2 44 0 761 157 17 73 chr10 93826506 93826684 -51762604 - MER20 DNA MER1_type -20 199 32 542 312 40 0 chr10 93827068 93827241 -51762047 + MER63A DNA MER1_type 27 206 -4 216 214 0 0 chr10 93827747 93827803 -51761485 + (CATG)n Simple_repeat Simple_repeat 3 58 0 291 297 113 44 chr10 93828317 93828637 -51760651 + LTR33A LTR ERVL 8 349 -174 285 298 29 0 chr10 93828674 93828778 -51760510 + LTR33A LTR ERVL 417 523 0 237 232 0 14 chr10 93829008 93829077 -51760211 + (CA)n Simple_repeat Simple_repeat 1 68 0 2176 173 29 11 chr10 93829134 93829584 -51759704 + L1MB3 LINE L1 5726 6183 0 191 321 155 0 chr10 93830134 93830218 -51759070 + MIR SINE MIR 156 252 -10 223 330 60 0 chr10 93830447 93830547 -51758741 - L3 LINE CR1 -156 1421 1316 233 324 119 14 chr10 93831037 93831247 -51758041 + L1MD2 LINE L1 5619 5850 -1958 202 210 0 48 chr10 93832384 93832446 -51756842 + (CAAA)n Simple_repeat Simple_repeat 2 60 0 186 43 0 0 chr10 93833279 93833302 -51755986 + (CATTT)n Simple_repeat Simple_repeat 5 27 0 283 339 33 8 chr10 93833303 93833424 -51755864 - MIR SINE MIR -80 182 59 848 285 123 12 chr10 93833826 93834258 -51755030 - L2 LINE L2 0 3313 2834 988 228 26 9 chr10 93835368 93835600 -51753688 - MIR SINE MIR -15 247 12 198 204 23 0 chr10 93835757 93835801 -51753487 - MIR SINE MIR -16 246 202 339 298 142 18 chr10 93836081 93836299 -51752989 - L1MC4a LINE L1 -1881 5927 5683 239 228 18 0 chr10 93837124 93837181 -51752107 + L2 LINE L2 2997 3054 -218 1219 299 57 19 chr10 93837591 93838206 -51751082 + L1ME3A LINE L1 5291 5928 -242 2044 106 0 22 chr10 93838254 93838576 -51750712 + L1PA13 LINE L1 5849 6163 0 21 0 0 0 chr10 93838899 93838920 -51750368 + AT_rich Low_complexity Low_complexity 1 21 0 269 286 0 0 chr10 93839140 93839203 -51750085 + L2 LINE L2 3251 3313 0 398 216 52 0 chr10 93839901 93839998 -51749290 + MIR SINE MIR 106 207 -55 390 296 45 6 chr10 93840663 93840839 -51748449 - MER117 DNA MER1_type -8 189 7 1301 185 86 28 chr10 93842221 93842546 -51746742 + L1MD2 LINE L1 6012 6355 -4 184 309 82 18 chr10 93843726 93843836 -51745452 - MIR SINE MIR -109 153 37 211 357 48 16 chr10 93843870 93843996 -51745292 + L2 LINE L2 3138 3267 -5 2703 36 3 0 chr10 93844496 93844801 -51744487 - AluY SINE Alu -5 306 1 198 333 57 43 chr10 93845519 93845660 -51743628 + L2 LINE L2 3098 3240 -32 483 300 145 26 chr10 93845776 93846086 -51743202 + L1ME4a LINE L1 5709 6055 -66 216 355 48 24 chr10 93846189 93846313 -51742975 - MIR SINE MIR -19 243 117 243 275 0 12 chr10 93846334 93846414 -51742874 + L1ME4a LINE L1 5844 5922 -199 213 154 0 0 chr10 93846746 93846785 -51742503 + MIR SINE MIR 97 135 -127 190 359 43 0 chr10 93846857 93846949 -51742339 - L2 LINE L2 -41 3231 3136 1294 109 0 0 chr10 93897082 93897256 -51692032 + AluSg/x SINE Alu 129 302 -8 583 143 84 17 chr10 93898664 93898783 -51690505 + MLT2D LTR ERVL 221 347 -67 242 284 168 0 chr10 93899326 93899421 -51689867 - MIR SINE MIR -49 213 103 621 242 0 0 chr10 93900393 93900542 -51688746 - L1MA10 LINE L1 -10 6324 6176 4277 140 36 14 chr10 93900546 93901358 -51687930 + L1MA9 LINE L1 5483 6312 0 780 213 37 57 chr10 93901371 93901615 -51687673 - L1MA10 LINE L1 -143 6191 5953 1732 217 31 13 chr10 93902140 93902527 -51686761 - MSTD LTR MaLR -2 394 1 299 235 12 12 chr10 93904510 93904591 -51684697 + GA-rich Low_complexity Low_complexity 1 81 0 351 338 114 5 chr10 93904598 93904817 -51684471 - MIR SINE MIR -7 255 13 209 176 0 0 chr10 93905143 93905177 -51684111 + CT-rich Low_complexity Low_complexity 2 35 0 953 176 0 13 chr10 93905238 93905397 -51683891 + FRAM SINE Alu 5 161 -15 220 331 14 0 chr10 93906077 93906172 -51683116 + MIR SINE MIR 20 115 -93 504 286 117 15 chr10 93906752 93906958 -51682330 - MIR SINE MIR 0 262 36 217 246 246 8 chr10 93908600 93908734 -51680554 + MIR SINE MIR 59 224 -38 204 214 0 0 chr10 93909156 93909212 -51680076 + (TCCA)n Simple_repeat Simple_repeat 4 59 0 434 233 49 18 chr10 93909253 93909416 -51679872 + (TCCA)n Simple_repeat Simple_repeat 1 168 0 265 211 0 32 chr10 93909442 93909537 -51679751 + (TCCA)n Simple_repeat Simple_repeat 3 94 0 250 282 59 47 chr10 93910398 93910568 -51678720 - MER5A DNA MER1_type -1 188 17 1728 196 6 6 chr10 93911248 93911560 -51677728 - AluJo SINE Alu 0 312 1 342 98 0 0 chr10 93912241 93912292 -51676996 + (TTCA)n Simple_repeat Simple_repeat 1 51 0 729 244 135 40 chr10 93912311 93912841 -51676447 - L2 LINE L2 -54 3259 2667 293 290 43 0 chr10 93912899 93912992 -51676296 - MIR SINE MIR -69 139 43 1680 153 55 3 chr10 93913890 93914217 -51675071 + L1MB3 LINE L1 5828 6171 -12 335 290 45 53 chr10 93914233 93914337 -51674951 + L1ME4a LINE L1 5639 5742 -379 2618 57 0 10 chr10 93914337 93914651 -51674637 + AluY SINE Alu 1 311 0 335 290 45 53 chr10 93914651 93914791 -51674497 + L1ME4a LINE L1 5742 5881 -240 254 254 159 47 chr10 93915623 93915855 -51673433 + L1MC4a LINE L1 1337 1594 -4936 312 27 0 0 chr10 93915914 93915951 -51673337 + (TTG)n Simple_repeat Simple_repeat 3 39 0 2030 122 7 0 chr10 93915951 93916229 -51673059 - AluSx SINE Alu -32 280 1 268 22 44 22 chr10 93916245 93916290 -51672998 + (TAAA)n Simple_repeat Simple_repeat 1 46 0 2043 134 0 16 chr10 93916328 93916633 -51672655 + AluSx SINE Alu 1 300 -12 330 308 48 0 chr10 93916770 93916874 -51672414 + MIR SINE MIR 103 211 -51 260 313 101 19 chr10 93916925 93917117 -51672171 + HAL1b LINE L1 447 647 -701 994 190 36 0 chr10 93917117 93917338 -51671950 + L1MB5 LINE L1 5946 6174 0 260 313 101 19 chr10 93917338 93917385 -51671903 + HAL1b LINE L1 647 689 -659 2231 119 3 0 chr10 93917415 93917708 -51671580 + AluSx SINE Alu 1 294 -18 273 284 88 14 chr10 93917961 93918109 -51671179 + MER20B DNA MER1_type 56 214 -5 402 293 66 37 chr10 93918161 93918659 -51670629 + L1MC4a LINE L1 2444 2956 -3584 494 316 95 9 chr10 93918721 93918952 -51670336 - MIR SINE MIR -9 253 3 787 320 103 10 chr10 93919261 93919842 -51669446 + L1MC4a LINE L1 4346 4980 -1560 2160 123 3 3 chr10 93920372 93920674 -51668614 + AluSx SINE Alu 1 302 -10 713 302 96 22 chr10 93921197 93921672 -51667616 + L1MC4a LINE L1 5791 6167 -348 271 280 243 27 chr10 93925154 93925348 -51663940 + MIR3 SINE MIR 15 248 -14 289 317 17 58 chr10 93925585 93925705 -51663583 - MIR SINE MIR -60 148 34 531 286 26 13 chr10 93925883 93926114 -51663174 + LTR16A LTR ERVL 199 432 -18 580 316 70 63 chr10 93926606 93927037 -51662251 + L2 LINE L2 2830 3263 -9 2522 122 54 33 chr10 93927041 93927466 -51661822 - Tigger2a DNA MER2_type 0 434 1 198 286 111 0 chr10 93928170 93928233 -51661055 - L2 LINE L2 -49 3223 3154 208 162 0 0 chr10 93928240 93928277 -51661011 - MIR SINE MIR -109 153 117 189 364 0 39 chr10 93928750 93928827 -51660461 - MIR SINE MIR -3 259 186 494 225 17 8 chr10 93928888 93929008 -51660280 + MER103 DNA DNA 1 121 -45 261 371 0 0 chr10 93929176 93929265 -51660023 + L2 LINE L2 3224 3312 -1 2353 46 3 26 chr10 93930367 93930669 -51658619 - AluY SINE Alu -16 295 1 2425 84 0 0 chr10 93931217 93931526 -51657762 - AluSx SINE Alu -3 309 1 346 242 42 11 chr10 93931560 93931655 -51657633 + MLT1K LTR MaLR 142 239 -349 494 278 23 23 chr10 93931691 93931867 -51657421 + MLT1K LTR MaLR 139 314 -274 2146 94 0 0 chr10 93932099 93932376 -51656912 - AluSx SINE Alu -35 277 1 780 244 6 0 chr10 93932406 93932582 -51656706 - MIR SINE MIR -73 189 13 239 287 46 65 chr10 93932591 93932699 -51656589 + L2 LINE L2 3167 3272 0 417 313 83 58 chr10 93933281 93933629 -51655659 - L2 LINE L2 -2 3311 2955 678 365 103 33 chr10 93933635 93934215 -51655073 + HAL1 LINE L1 1887 2507 0 217 314 14 0 chr10 93934658 93934728 -51654560 + L2 LINE L2 2994 3064 -208 186 361 115 16 chr10 93936384 93936506 -51652782 + L2 LINE L2 3180 3313 0 363 352 14 21 chr10 93937539 93937684 -51651604 + MER5B DNA MER1_type 14 157 -21 511 248 39 20 chr10 93937771 93937924 -51651364 - MIR SINE MIR -78 184 29 498 283 16 43 chr10 93939394 93939578 -51649710 + L2 LINE L2 2921 3099 -173 742 289 68 31 chr10 93940928 93941309 -51647979 + MLT1K LTR MaLR 170 564 -24 332 332 116 19 chr10 93941693 93942012 -51647276 - L2 LINE L2 -3 3269 2920 891 310 134 16 chr10 93943309 93943970 -51645318 - L2 LINE L2 -7 3306 2554 2600 114 10 5 chr10 93944171 93944558 -51644730 - L1MA5 LINE L1 -5 6295 5907 185 429 12 0 chr10 93944679 93944763 -51644525 + L3 LINE CR1 1492 1576 -1 416 375 57 4 chr10 93945073 93945321 -51643967 + L3 LINE CR1 810 1070 -507 380 350 25 0 chr10 93945341 93945501 -51643787 - MIR SINE MIR -14 248 85 1052 63 0 0 chr10 93945539 93945666 -51643622 + AluSg SINE Alu 1 127 -183 214 337 46 17 chr10 93945693 93945868 -51643420 - MIR3 SINE MIR -7 201 22 1980 159 24 32 chr10 93945869 93946246 -51643042 - MLT1A2 LTR MaLR 0 374 1 278 302 73 0 chr10 93946595 93946691 -51642597 - L2 LINE L2 -18 3295 3193 381 274 118 13 chr10 93948047 93948194 -51641094 - MIR SINE MIR -63 145 36 195 248 425 0 chr10 93948621 93948762 -51640526 - MIR SINE MIR -22 240 40 629 266 82 4 chr10 93949898 93950238 -51639050 + MLT1I LTR MaLR 16 409 0 319 333 9 0 chr10 93951070 93951184 -51638104 + (TG)n Simple_repeat Simple_repeat 1 115 0 2096 167 56 80 chr10 93951867 93951995 -51637293 + MLT1D LTR MaLR 3 132 -373 2337 90 0 0 chr10 93951995 93952296 -51636992 + AluY SINE Alu 1 301 -10 2096 167 56 80 chr10 93952296 93952682 -51636606 + MLT1D LTR MaLR 132 505 0 485 287 81 90 chr10 93953705 93954039 -51635249 + L1ME4a LINE L1 5791 6121 0 488 310 112 13 chr10 93954179 93954411 -51634877 - MIR SINE MIR -6 256 2 503 266 47 71 chr10 93955148 93955445 -51633843 + MER102b DNA MER1_type 20 309 -32 22 56 0 0 chr10 93956839 93956875 -51632413 + GC_rich Low_complexity Low_complexity 1 36 0 204 289 23 31 chr10 93958945 93959073 -51630215 + C-rich Low_complexity Low_complexity 6 132 0 24 0 0 0 chr10 93959687 93959711 -51629577 + GC_rich Low_complexity Low_complexity 1 24 0 234 0 0 0 chr10 93960074 93960100 -51629188 + (CAGCC)n Simple_repeat Simple_repeat 4 29 0 364 279 7 7 chr10 93960118 93960272 -51629016 + (CGG)n Simple_repeat Simple_repeat 1 154 0 310 270 11 35 chr10 93960526 93960700 -51628588 + C-rich Low_complexity Low_complexity 1 170 0 1588 142 7 28 chr10 93960800 93961088 -51628200 + AluSx SINE Alu 23 304 -8 818 137 5 142 chr10 93961088 93961124 -51628164 + AluJo/FRAM SINE Alu 134 173 -139 2474 101 62 0 chr10 93961124 93961479 -51627809 + MER51B LTR ERV1 1 377 0 818 137 5 142 chr10 93961479 93961639 -51627649 + AluJo/FRAM SINE Alu 173 303 -9 2405 93 0 0 chr10 93961710 93962023 -51627265 + AluSq SINE Alu 1 313 0 870 152 0 0 chr10 93962480 93962612 -51626676 + FRAM SINE Alu 26 157 -19 260 296 30 93 chr10 93962682 93962952 -51626336 - MIR SINE MIR -8 254 2 2540 39 13 0 chr10 93964742 93965049 -51624239 - AluY SINE Alu 0 311 1 2607 148 67 24 chr10 93966146 93966695 -51622593 + MER50 LTR ERV1 1 573 -161 1876 142 23 0 chr10 93966695 93966998 -51622290 - AluSx SINE Alu -2 310 1 438 271 7 29 chr10 93967009 93967107 -51622181 + L2 LINE L2 3172 3271 -42 1513 183 42 3 chr10 93967107 93967419 -51621869 + MER33 DNA MER1_type 1 324 0 438 271 7 29 chr10 93967419 93967434 -51621854 + L2 LINE L2 3271 3285 -28 2093 133 0 3 chr10 93967434 93967735 -51621553 + AluJb SINE Alu 1 300 -12 438 271 7 29 chr10 93967735 93967760 -51621528 + L2 LINE L2 3285 3308 -5 2076 141 73 48 chr10 93967781 93968030 -51621258 + L1MC2 LINE L1 5815 6056 -288 2084 124 14 0 chr10 93968030 93968320 -51620968 + AluSx SINE Alu 3 296 -16 2076 141 73 48 chr10 93968320 93968484 -51620804 + L1MC2 LINE L1 6056 6246 -98 2091 131 3 3 chr10 93968484 93968790 -51620498 + AluSx SINE Alu 1 306 -6 2076 141 73 48 chr10 93968790 93968892 -51620396 + L1MC2 LINE L1 6246 6344 0 185 250 28 28 chr10 93968901 93968973 -51620315 + L2 LINE L2 2668 2739 -575 1045 168 35 35 chr10 93969280 93969412 -51619876 + AluSx SINE Alu 1 135 -177 2346 75 0 13 chr10 93969412 93969718 -51619570 + AluY SINE Alu 1 302 -9 1045 168 35 35 chr10 93969718 93969788 -51619500 + AluSx SINE Alu 134 203 -109 240 216 0 39 chr10 93969933 93969984 -51619304 + Alu SINE Alu 138 186 -116 1035 133 0 0 chr10 93970084 93970227 -51619061 + AluSg/x SINE Alu 119 261 -51 237 83 0 0 chr10 93970231 93970267 -51619021 + (TAAAA)n Simple_repeat Simple_repeat 2 37 0 492 252 164 14 chr10 93970364 93970650 -51618638 + L1MC5 LINE L1 7603 7931 -30 226 190 103 0 chr10 93971091 93971149 -51618139 - MIR SINE MIR -21 241 178 26 30 0 0 chr10 93971181 93971214 -51618074 + AT_rich Low_complexity Low_complexity 1 33 0 392 316 145 18 chr10 93971221 93971449 -51617839 - MIR SINE MIR -2 260 4 1780 166 3 0 chr10 93972445 93972734 -51616554 + AluSx SINE Alu 19 308 -4 2403 74 3 0 chr10 93973312 93973610 -51615678 - AluSp SINE Alu -14 299 1 343 329 90 15 chr10 93974122 93974511 -51614777 - L1ME LINE L1 -490 5672 5255 2174 85 0 19 chr10 93975031 93975338 -51613950 + AluSx SINE Alu 1 301 -11 23 0 0 0 chr10 93975323 93975346 -51613942 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr10 93975372 93975396 -51613892 + AT_rich Low_complexity Low_complexity 1 24 0 * 1933 138 50 52 chr10 93975393 93975600 -51613688 + L1MC3 LINE L1 6705 6912 -873 1633 172 0 44 chr10 93975600 93975920 -51613368 + AluJb SINE Alu 1 306 -6 1933 138 50 52 chr10 93975920 93976112 -51613176 + L1MC3 LINE L1 6912 7103 -682 268 315 11 0 chr10 93976115 93976204 -51613084 + MLT1F1 LTR MaLR 45 134 -433 454 172 0 35 chr10 93976217 93976304 -51612984 + L1MC3 LINE L1 7218 7301 -484 1185 86 10 51 chr10 93976304 93976501 -51612787 + AluSg/x SINE Alu 120 308 -2 2151 134 11 152 chr10 93976504 93976555 -51612733 + L1MC3 LINE L1 7287 7344 -441 2003 126 0 7 chr10 93976555 93976856 -51612432 + AluSg SINE Alu 1 299 -11 2151 134 11 152 chr10 93976856 93976962 -51612326 + L1MC3 LINE L1 7344 7463 -322 2221 99 3 7 chr10 93976962 93977265 -51612023 + AluSx SINE Alu 1 302 -10 2151 134 11 152 chr10 93977265 93977327 -51611961 + L1MC3 LINE L1 7463 7532 -253 1586 161 10 10 chr10 93977327 93977619 -51611669 + AluJb SINE Alu 1 292 -20 2151 134 11 152 chr10 93977619 93977923 -51611365 + L1MC3 LINE L1 7532 7729 -56 1600 114 118 26 chr10 93977923 93978195 -51611093 - AluSx SINE Alu -15 297 1 2151 134 11 152 chr10 93978195 93978234 -51611054 + L1MC3 LINE L1 7729 7772 -13 1157 96 0 24 chr10 93978237 93978424 -51610864 - AluSg/x SINE Alu 0 302 120 1261 141 5 19 chr10 93978451 93978657 -51610631 - AluJo SINE Alu -25 287 85 850 149 0 8 chr10 93978666 93978800 -51610488 - FLAM_C SINE Alu -10 133 1 1034 137 0 0 chr10 93978954 93979115 -51610173 - AluSg/x SINE Alu -19 293 133 774 259 27 14 chr10 93979264 93979484 -51609804 - Charlie8 DNA MER1_type -2139 278 56 203 319 69 17 chr10 93979545 93979661 -51609627 + L2 LINE L2 3191 3312 -1 1904 147 0 0 chr10 93979708 93980007 -51609281 - AluSq SINE Alu -14 299 1 288 278 22 22 chr10 93980060 93980150 -51609138 - ERVL LTR ERVL -3418 2346 2257 1130 224 98 4 chr10 93980249 93980526 -51608762 - MLT1I LTR MaLR 0 409 107 452 263 69 40 chr10 93980672 93980847 -51608441 - ERVL LTR ERVL -3668 2096 1917 944 210 131 82 chr10 93980847 93980922 -51608366 + MLT2B1 LTR ERVL 1 71 -343 2049 113 0 3 chr10 93980922 93981235 -51608053 + AluSg SINE Alu 1 312 0 944 210 131 82 chr10 93981235 93981528 -51607760 + MLT2B1 LTR ERVL 71 363 -51 1436 196 28 3 chr10 93981528 93981814 -51607474 + AluJb SINE Alu 2 294 -18 222 150 0 0 chr10 93981837 93981877 -51607411 + (TA)n Simple_repeat Simple_repeat 2 41 0 225 125 0 21 chr10 93981878 93981926 -51607362 - LTR66 LTR ERVL -172 438 392 27 0 0 0 chr10 93981926 93981953 -51607335 + AT_rich Low_complexity Low_complexity 1 27 0 3023 233 79 65 chr10 93981987 93982952 -51606336 + MLT1A2-int LTR MaLR 1 1104 -267 2201 96 26 0 chr10 93982952 93983255 -51606033 - AluSq SINE Alu -2 311 1 3023 233 79 65 chr10 93983255 93983480 -51605808 + MLT1A2-int LTR MaLR 1104 1324 -47 981 200 28 76 chr10 93983540 93983790 -51605498 + MLT1A2 LTR MaLR 1 238 -136 325 277 108 31 chr10 93983902 93984032 -51605256 + HERVL LTR ERVL 1743 1882 -3772 875 148 0 0 chr10 93984032 93984167 -51605121 - MLT1A2 LTR MaLR 0 374 240 376 123 53 0 chr10 93984184 93984241 -51605047 + MER105 DNA DNA 145 204 0 579 160 85 0 chr10 93984723 93984817 -51604471 - MER5B DNA MER1_type -2 176 75 1703 154 18 21 chr10 93984825 93985149 -51604139 - AluSx SINE Alu 0 323 1 2015 114 7 13 chr10 93985155 93985462 -51603826 - AluSp SINE Alu -8 305 1 1596 228 54 74 chr10 93985751 93986265 -51603023 + MLT1F1 LTR MaLR 26 530 -37 2118 111 3 7 chr10 93986265 93986571 -51602717 - AluSg SINE Alu -5 305 1 1596 228 54 74 chr10 93986571 93986609 -51602679 + MLT1F1 LTR MaLR 530 567 0 1284 190 120 53 chr10 93986632 93986974 -51602314 + MLT1A1 LTR MaLR 1 365 0 1551 228 205 17 chr10 93987496 93987979 -51601309 - MLT1E LTR MaLR 0 593 20 1095 114 51 0 chr10 93987979 93988137 -51601151 - AluSg/x SINE Alu -16 294 129 1421 104 7 50 chr10 93988352 93988631 -51600657 + AluSg SINE Alu 1 267 -43 1802 135 4 0 chr10 93989766 93990033 -51599255 + AluSq SINE Alu 1 268 -45 1331 258 76 85 chr10 93990098 93990630 -51598658 + L1ME3A LINE L1 4086 4621 -1549 1996 113 23 13 chr10 93990630 93990931 -51598357 + AluSx SINE Alu 1 304 -8 1331 258 76 85 chr10 93990931 93991165 -51598123 + L1ME3A LINE L1 4621 4856 -1314 2118 178 118 15 chr10 93991165 93991621 -51597667 - MLT1D LTR MaLR -2 503 1 1331 258 76 85 chr10 93991621 93991848 -51597440 + L1ME3A LINE L1 4856 5083 -1087 1473 155 71 34 chr10 93991848 93992144 -51597144 + AluJb SINE Alu 1 307 -5 1331 258 76 85 chr10 93992144 93992373 -51596915 + L1ME3A LINE L1 5083 5312 -858 2049 134 0 6 chr10 93992373 93992686 -51596602 + AluSx SINE Alu 1 311 -1 1331 258 76 85 chr10 93992686 93993075 -51596213 + L1ME3A LINE L1 5312 5718 -452 2066 135 0 0 chr10 93993075 93993386 -51595902 + AluSx SINE Alu 1 311 -1 1331 258 76 85 chr10 93993386 93993629 -51595659 + L1ME3A LINE L1 5718 5962 -208 931 214 101 69 chr10 93993640 93993866 -51595422 - MSTD LTR MaLR -4 392 144 2100 132 0 0 chr10 93993866 93994177 -51595111 - AluSx SINE Alu 0 312 2 931 214 101 69 chr10 93994177 93994284 -51595004 - MSTD LTR MaLR -252 144 42 2033 110 3 32 chr10 93994536 93994845 -51594443 - AluSx SINE Alu -12 300 1 2784 207 57 86 chr10 93994872 93995892 -51593396 + L1ME3 LINE L1 5146 6138 -24 2179 101 3 0 chr10 93996070 93996368 -51592920 + AluSq SINE Alu 1 299 -14 509 245 82 31 chr10 93996747 93996906 -51592382 - MLT1G1 LTR MaLR 0 595 429 2038 135 3 3 chr10 93997792 93998095 -51591193 + AluJo SINE Alu 1 303 -9 1897 126 0 20 chr10 93998490 93998792 -51590496 + AluSx SINE Alu 3 298 -14 210 179 0 0 chr10 93998797 93998836 -51590452 + MIR SINE MIR 214 252 -10 2021 85 3 48 chr10 93999551 93999864 -51589424 + AluSx SINE Alu 2 301 0 243 230 319 18 chr10 93999867 93999980 -51589308 + L2 LINE L2 3165 3311 -2 350 280 198 48 chr10 94000536 94001051 -51588237 - L2 LINE L2 -351 2963 2372 702 181 97 13 chr10 94001442 94001597 -51587691 + MIR SINE MIR 14 181 -81 297 320 157 14 chr10 94001851 94001998 -51587290 - MER5B DNA MER1_type -6 172 5 1985 91 3 91 chr10 94003579 94003920 -51585368 - AluSx SINE Alu -1 311 1 280 323 40 8 chr10 94004205 94004329 -51584959 - MER113 DNA MER1_type? -29 492 365 310 222 111 11 chr10 94004347 94004437 -51584851 - HAL1b LINE L1 -8 1340 1242 186 43 0 0 chr10 94004509 94004532 -51584756 + (TCCCC)n Simple_repeat Simple_repeat 1 23 0 403 319 56 43 chr10 94004661 94004965 -51584323 - L1ME3A LINE L1 -230 5940 5633 252 232 61 24 chr10 94005033 94005115 -51584173 - L1M1 LINE L1 -720 5582 5498 2097 102 0 10 chr10 94005193 94005487 -51583801 + AluSx SINE Alu 1 291 -21 1772 152 16 7 chr10 94005625 94005934 -51583354 - AluJo SINE Alu 0 312 1 1230 151 4 46 chr10 94005975 94006214 -51583074 - AluJb SINE Alu -83 229 1 2064 119 0 3 chr10 94006218 94006511 -51582777 - AluSx SINE Alu -18 294 3 6224 135 14 1 chr10 94006529 94007514 -51581774 + L1MA4 LINE L1 5300 6297 -3 765 157 0 0 chr10 94007971 94008092 -51581196 + FLAM_C SINE Alu 2 122 -21 964 193 20 63 chr10 94008161 94008415 -51580873 - MER96B DNA MER1_type? -10 407 165 2329 90 0 0 chr10 94008640 94008941 -51580347 + AluSx SINE Alu 1 301 -11 289 246 82 18 chr10 94009179 94009289 -51579999 + L1MC4a LINE L1 6573 6689 -1119 2099 236 44 62 chr10 94009304 94010049 -51579239 + L1MC5 LINE L1 6804 7535 -426 335 249 92 65 chr10 94010104 94010289 -51578999 + L1ME3A LINE L1 5931 6120 -50 183 236 42 0 chr10 94012147 94012219 -51577069 - L2 LINE L2 -56 3257 3183 1977 114 0 4 chr10 94014066 94014402 -51574886 - AluSx SINE Alu 0 337 3 1479 197 0 23 chr10 94014802 94015107 -51574181 - AluJo SINE Alu -14 298 1 811 252 132 87 chr10 94015132 94015318 -51573970 - HAL1 LINE L1 0 2507 2331 2040 93 11 0 chr10 94015318 94015643 -51573645 - AluSg SINE Alu 0 328 1 2378 55 3 0 chr10 94015652 94015945 -51573343 - AluY SINE Alu -17 294 1 811 252 132 87 chr10 94015945 94016355 -51572933 - HAL1 LINE L1 -183 2324 1873 226 297 109 57 chr10 94016635 94016810 -51572478 + MIR SINE MIR 35 218 -44 1906 72 7 79 chr10 94017082 94017373 -51571915 - AluSx SINE Alu -40 272 3 22 35 0 0 chr10 94017842 94017871 -51571417 + AT_rich Low_complexity Low_complexity 1 29 0 2168 87 3 3 chr10 94017871 94018158 -51571130 - AluSx SINE Alu -25 287 1 1635 148 14 24 chr10 94018171 94018461 -51570827 - AluJo SINE Alu -25 287 1 1776 131 19 47 chr10 94018940 94019410 -51569878 + AluJo SINE Alu 1 461 0 530 269 64 99 chr10 94019446 94019920 -51569368 - L1ME4a LINE L1 -85 6036 5547 1824 158 28 3 chr10 94019920 94020243 -51569045 + L1MC1 LINE L1 5993 6323 -10 2223 97 0 0 chr10 94020243 94020542 -51568746 - AluSg SINE Alu -10 300 2 530 269 64 99 chr10 94020542 94020648 -51568640 - L1ME4a LINE L1 -572 5549 5477 1622 142 24 21 chr10 94020706 94020995 -51568293 + AluJb SINE Alu 1 290 -22 523 252 25 0 chr10 94020997 94021116 -51568172 - L2 LINE L2 -17 3296 3175 629 243 114 89 chr10 94021127 94021564 -51567724 - L2 LINE L2 -740 2574 2127 777 256 28 41 chr10 94021602 94021640 -51567648 - L1ME4a LINE L1 -2329 3817 3780 2092 107 31 0 chr10 94021640 94021930 -51567358 - AluSx SINE Alu -13 299 1 777 256 28 41 chr10 94021930 94022211 -51567077 - L1ME4a LINE L1 -2366 3780 3502 243 186 14 71 chr10 94022212 94022257 -51567031 - MSTB LTR MaLR 0 426 385 1476 181 4 4 chr10 94022257 94022534 -51566754 - AluJb SINE Alu -35 277 1 243 186 14 71 chr10 94022534 94022558 -51566730 - MSTB LTR MaLR -41 385 361 2072 132 0 0 chr10 94022570 94022866 -51566422 + AluSg SINE Alu 1 296 -14 704 161 8 8 chr10 94022868 94022992 -51566296 - L1MC1 LINE L1 -9 6324 6201 410 226 78 0 chr10 94022992 94023094 -51566194 - L1ME LINE L1 -482 5684 5575 1954 151 3 3 chr10 94023095 94023406 -51565882 + AluJb SINE Alu 1 311 -1 206 105 26 0 chr10 94023409 94023447 -51565841 + GA-rich Low_complexity Low_complexity 2 40 0 298 256 12 12 chr10 94023447 94023529 -51565759 - L1ME LINE L1 -572 5592 5511 * 2812 204 8 3 chr10 94023501 94024108 -51565180 + L1MA4 LINE L1 4807 5419 -750 958 118 0 15 chr10 94024114 94024249 -51565039 + AluJ SINE Alu 1 133 -169 2288 108 55 77 chr10 94024272 94024497 -51564791 + L1MA4 LINE L1 5386 5614 -686 2561 153 61 46 chr10 94024497 94025020 -51564268 + LTR26B LTR ERV1 1 531 0 2288 108 55 77 chr10 94025020 94025178 -51564110 + L1MA4 LINE L1 5614 5760 -540 2163 113 3 0 chr10 94025178 94025488 -51563800 + AluSx SINE Alu 1 311 -1 2288 108 55 77 chr10 94025488 94025556 -51563732 + L1MA4 LINE L1 5760 5828 -472 913 177 6 8 chr10 94025557 94025715 -51563573 + AluJb SINE Alu 137 277 -35 2641 126 16 72 chr10 94025715 94026232 -51563056 + L1MA4 LINE L1 5812 6299 -1 913 177 6 8 chr10 94026232 94026245 -51563043 + AluJb SINE Alu 277 289 -23 843 234 10 0 chr10 94026241 94026446 -51562842 - L1ME LINE L1 -640 5526 5320 * 2400 86 0 0 chr10 94026447 94026748 -51562540 - AluSx SINE Alu -11 301 1 569 296 66 36 chr10 94026750 94027223 -51562065 - L1ME LINE L1 -2220 3926 3430 1973 152 7 3 chr10 94027223 94027526 -51561762 - AluSx SINE Alu -8 304 1 569 296 66 36 chr10 94027526 94027656 -51561632 - L1ME LINE L1 -2716 3430 3305 2261 98 7 3 chr10 94027704 94028000 -51561288 - AluSq SINE Alu -16 297 1 456 284 72 29 chr10 94028123 94028269 -51561019 - L1ME LINE L1 -3015 3131 2972 2343 91 3 0 chr10 94028269 94028567 -51560721 - AluSq SINE Alu -13 300 2 456 284 72 29 chr10 94028567 94028628 -51560660 - L1ME LINE L1 -3174 2972 2915 1811 153 7 7 chr10 94028632 94028927 -51560361 - AluJb SINE Alu -17 295 1 28 0 0 0 chr10 94028933 94028961 -51560327 + AT_rich Low_complexity Low_complexity 1 28 0 2285 113 3 0 chr10 94028961 94029270 -51560018 + AluSx SINE Alu 1 310 -2 585 139 0 0 chr10 94029441 94029527 -51559761 - AluJ/FLAM SINE Alu -226 86 1 747 239 81 4 chr10 94029552 94029799 -51559489 - L1ME2 LINE L1 -278 5955 5690 493 60 83 0 chr10 94029809 94029942 -51559346 + (TA)n Simple_repeat Simple_repeat 2 145 0 1377 182 77 0 chr10 94029947 94030068 -51559220 - AluJb SINE Alu -46 266 156 426 20 0 0 chr10 94030068 94030119 -51559169 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 1377 182 77 0 chr10 94030119 94030244 -51559044 - AluJb SINE Alu -156 156 1 462 247 53 35 chr10 94030254 94030424 -51558864 - L1ME2 LINE L1 -563 5670 5498 2403 104 0 0 chr10 94030431 94030740 -51558548 - AluSc SINE Alu 0 309 1 2213 113 0 7 chr10 94030742 94031052 -51558236 - AluSg SINE Alu -2 308 1 1890 154 3 3 chr10 94031054 94031352 -51557936 - AluJb SINE Alu -14 298 1 1410 234 42 2 chr10 94031362 94031772 -51557516 - L1ME2 LINE L1 -1100 5115 4690 402 292 79 50 chr10 94031782 94031920 -51557368 - L1ME2 LINE L1 -2034 4181 4034 1920 131 10 7 chr10 94031920 94032211 -51557077 - AluJb SINE Alu -13 299 8 402 292 79 50 chr10 94032211 94032274 -51557014 - L1ME2 LINE L1 -2181 4034 3974 735 253 132 16 chr10 94032282 94032721 -51556567 - L1ME2 LINE L1 -2314 3901 3412 688 199 23 8 chr10 94032727 94032858 -51556430 + AluJo SINE Alu 3 135 -177 25 0 0 0 chr10 94032858 94032883 -51556405 + AT_rich Low_complexity Low_complexity 1 25 0 1697 229 204 34 chr10 94032883 94034143 -51555145 - L1ME2 LINE L1 -2806 3409 2020 2123 74 0 60 chr10 94034535 94034833 -51554455 - AluSc SINE Alu -25 284 5 2045 138 7 0 chr10 94035078 94035374 -51553914 - AluSx SINE Alu -14 298 1 319 245 196 21 chr10 94035390 94035533 -51553755 - MIR SINE MIR -42 220 53 26 30 0 0 chr10 94036650 94036683 -51552605 + AT_rich Low_complexity Low_complexity 1 33 0 2010 136 14 10 chr10 94039044 94039339 -51549949 - AluSx SINE Alu -11 301 6 22 35 0 0 chr10 94041049 94041078 -51548210 + AT_rich Low_complexity Low_complexity 1 29 0 2398 49 0 39 chr10 94041084 94041389 -51547899 - AluY SINE Alu -18 293 1 400 197 77 26 chr10 94042164 94042281 -51547007 + MLT1L LTR MaLR 134 256 -359 957 100 0 8 chr10 94042514 94042644 -51546644 + AluJb SINE Alu 5 133 -179 2097 127 7 16 chr10 94042814 94043122 -51546166 - AluSx SINE Alu -7 305 1 29 60 0 0 chr10 94043181 94043231 -51546057 + AT_rich Low_complexity Low_complexity 1 50 0 2297 70 0 13 chr10 94043548 94043850 -51545438 + AluY SINE Alu 1 298 -13 239 184 340 0 chr10 94044256 94044359 -51544929 + L1MB7 LINE L1 4904 5041 -1105 3564 162 76 49 chr10 94044361 94044530 -51544758 + L1MB7 LINE L1 5159 5322 -862 1860 151 7 13 chr10 94044530 94044828 -51544460 + AluJb SINE Alu 1 296 -16 3564 162 76 49 chr10 94044828 94045651 -51543637 + L1MB7 LINE L1 5322 6183 -1 195 42 0 0 chr10 94045683 94045707 -51543581 + (A)n Simple_repeat Simple_repeat 1 24 0 1046 205 0 19 chr10 94045867 94046174 -51543114 + MER2 DNA MER2_type 3 345 0 1690 164 25 11 chr10 94046318 94046599 -51542689 - AluJo SINE Alu -17 295 11 692 250 51 10 chr10 94047802 94047998 -51541290 + Charlie1 DNA MER1_type 1 204 -2557 392 178 0 33 chr10 94047999 94048089 -51541199 + Charlie1 DNA MER1_type 2633 2719 -42 2007 128 7 13 chr10 94048557 94048862 -51540426 + AluSx SINE Alu 1 303 -9 1310 202 107 0 chr10 94048986 94049238 -51540050 + AluJb SINE Alu 1 279 -33 1762 179 0 26 chr10 94049405 94049712 -51539576 - AluJb SINE Alu -13 299 1 1105 221 24 69 chr10 94050620 94050995 -51538293 + L1MD2 LINE L1 5992 6349 -10 1751 191 0 17 chr10 94051027 94051326 -51537962 - AluJo SINE Alu -18 294 1 927 99 0 23 chr10 94051897 94052028 -51537260 - FLAM_C SINE Alu -1 132 5 2162 123 0 13 chr10 94052183 94052483 -51536805 - AluSx SINE Alu -16 296 1 255 128 0 0 chr10 94053068 94053101 -51536187 + (A)n Simple_repeat Simple_repeat 1 36 -11 2034 140 3 10 chr10 94053101 94053415 -51535873 + AluSq SINE Alu 1 312 -1 255 128 0 0 chr10 94053415 94053428 -51535860 + (A)n Simple_repeat Simple_repeat 35 47 0 1855 128 83 7 chr10 94053548 94053866 -51535422 + AluSx SINE Alu 1 340 0 7963 53 122 95 chr10 94055145 94056530 -51532758 + SVA Other Other 2 1423 0 222 235 20 0 chr10 94057454 94057505 -51531783 - L3b LINE CR1 -176 1407 1356 841 152 0 15 chr10 94058006 94058138 -51531150 + FLAM_C SINE Alu 7 136 -7 2049 107 0 0 chr10 94058163 94058424 -51530864 + AluSx SINE Alu 1 261 -51 237 83 0 0 chr10 94058428 94058464 -51530824 + (TAAAA)n Simple_repeat Simple_repeat 2 37 0 537 236 71 18 chr10 94058561 94058786 -51530502 + L1MC5 LINE L1 7603 7839 -122 252 190 103 0 chr10 94059288 94059346 -51529942 - MIR SINE MIR -21 241 178 36 62 0 0 chr10 94059378 94059442 -51529846 + AT_rich Low_complexity Low_complexity 1 64 0 310 266 165 25 chr10 94059474 94059632 -51529656 - MIR SINE MIR -65 197 18 1844 166 3 0 chr10 94060642 94060931 -51528357 + AluSx SINE Alu 19 308 -4 2466 71 3 0 chr10 94061509 94061805 -51527483 - AluSp SINE Alu -16 297 1 306 312 64 18 chr10 94062317 94062706 -51526582 - L1ME LINE L1 -490 5672 5255 2323 84 0 19 chr10 94063226 94063534 -51525754 + AluSx SINE Alu 1 302 -10 734 203 0 0 chr10 94063946 94064074 -51525214 + AluSg/x SINE Alu 144 271 -39 3632 134 176 7 chr10 94064103 94064847 -51524441 + Tigger3(Golem) DNA MER2_type 2159 3028 -1 1756 150 36 11 chr10 94065354 94065656 -51523632 + AluSx SINE Alu 1 309 0 2055 116 0 46 chr10 94065971 94066298 -51522990 - AluSx SINE Alu 0 312 1 1581 171 168 0 chr10 94066298 94066644 -51522644 + LTR47A LTR ERVL 46 449 -3 1976 138 11 3 chr10 94067085 94067368 -51521920 + AluJo SINE Alu 4 288 -24 30 27 0 0 chr10 94067371 94067408 -51521880 + AT_rich Low_complexity Low_complexity 1 37 0 1546 195 7 14 chr10 94067501 94067793 -51521495 - AluJb SINE Alu -22 290 1 182 239 65 0 chr10 94067960 94068006 -51521282 - MIR SINE MIR -136 126 78 2279 90 0 7 chr10 94068469 94068770 -51520518 - AluY SINE Alu -12 299 1 1738 155 14 17 chr10 94068994 94069291 -51519997 - AluJb SINE Alu -16 296 1 27 29 0 0 chr10 94069326 94069360 -51519928 + AT_rich Low_complexity Low_complexity 1 34 0 1317 135 5 29 chr10 94069476 94069612 -51519676 + AluSq SINE Alu 2 133 -180 2203 100 0 10 chr10 94069612 94069931 -51519357 + AluSx SINE Alu 1 312 0 1317 135 5 29 chr10 94069931 94070001 -51519287 + AluSq SINE Alu 133 203 -110 2339 107 0 3 chr10 94070037 94070347 -51518941 - AluSx SINE Alu -3 309 1 613 199 30 15 chr10 94070686 94070817 -51518471 - FLAM_A SINE Alu 0 133 1 2304 104 0 3 chr10 94070828 94071127 -51518161 - AluSx SINE Alu -14 298 1 1471 181 91 18 chr10 94072446 94072722 -51516566 - AluJb SINE Alu -10 302 7 2231 114 3 3 chr10 94075025 94075323 -51513965 + AluSx SINE Alu 1 298 -14 655 138 0 0 chr10 94075375 94075469 -51513819 + AluJ/FLAM SINE Alu 1 94 -218 330 186 29 0 chr10 94075469 94075539 -51513749 + AluJo SINE Alu 66 137 -165 475 302 104 10 chr10 94075672 94075960 -51513328 - MER46C DNA MER2_type -22 316 2 605 156 52 44 chr10 94076692 94076827 -51512461 + AluJo SINE Alu 2 136 -176 2276 87 0 0 chr10 94076877 94077164 -51512124 + AluY SINE Alu 1 287 -24 2287 97 7 0 chr10 94077201 94077499 -51511789 + AluSx SINE Alu 2 301 -11 1923 118 11 4 chr10 94078314 94078577 -51510711 + AluSq SINE Alu 1 265 -48 2096 108 87 0 chr10 94078591 94078878 -51510410 + AluSq SINE Alu 1 312 -1 1764 167 3 10 chr10 94078941 94079235 -51510053 + AluJb SINE Alu 1 292 -20 2208 117 0 13 chr10 94079606 94079922 -51509366 + AluSx SINE Alu 1 312 0 2256 103 13 6 chr10 94080036 94080347 -51508941 - AluSq SINE Alu 0 313 1 442 258 149 16 chr10 94081454 94081648 -51507640 + MLT1J LTR MaLR 28 247 -264 1253 230 83 136 chr10 94082042 94082175 -51507113 + L1MC4 LINE L1 5806 5944 -1968 2331 82 3 0 chr10 94082175 94082466 -51506822 - AluSp SINE Alu -21 292 1 1253 230 83 136 chr10 94082466 94083561 -51505727 + L1MC4 LINE L1 5944 7052 -860 921 179 29 0 chr10 94083561 94083734 -51505554 + L1MA9 LINE L1 5934 6111 -201 1088 188 86 0 chr10 94083735 94083932 -51505356 + Tigger3(Golem) DNA MER2_type 2 215 -2814 1288 119 6 0 chr10 94083933 94084109 -51505179 + AluSp SINE Alu 2 178 -135 2243 94 3 7 chr10 94084236 94084533 -51504755 - AluSq SINE Alu -11 302 7 1823 51 9 0 chr10 94085175 94085391 -51503897 + AluY SINE Alu 1 218 -93 266 50 50 0 chr10 94085391 94085431 -51503857 + AluY SINE Alu 250 291 -9 23 54 0 0 chr10 94085857 94085894 -51503394 + AT_rich Low_complexity Low_complexity 1 37 0 1401 127 0 0 chr10 94086836 94087025 -51502263 + AluSx SINE Alu 40 228 -84 279 221 180 59 chr10 94088336 94088385 -51500903 + L1MC5 LINE L1 7638 7680 -281 2201 92 3 0 chr10 94088385 94088696 -51500592 + AluSp SINE Alu 1 312 0 279 221 180 59 chr10 94088696 94088867 -51500421 + L1MC5 LINE L1 7680 7886 -75 225 65 0 0 chr10 94089138 94089169 -51500119 + (A)n Simple_repeat Simple_repeat 1 31 0 312 130 98 76 chr10 94090960 94091052 -51498236 + L1MC5 LINE L1 7838 7931 -30 275 262 8 63 chr10 94091031 94091157 -51498131 + HAL1 LINE L1 2353 2471 -36 * 475 239 157 19 chr10 94092103 94092262 -51497026 + MER5A DNA MER1_type 9 189 0 327 25 0 0 chr10 94092551 94092591 -51496697 + (TG)n Simple_repeat Simple_repeat 2 41 0 989 230 147 30 chr10 94093553 94093948 -51495340 + L2 LINE L2 2868 3308 -5 245 29 29 0 chr10 94093981 94094015 -51495273 + (TA)n Simple_repeat Simple_repeat 1 35 0 2251 88 7 3 chr10 94094015 94094310 -51494978 - AluSc SINE Alu -13 296 1 2056 145 3 0 chr10 94094314 94094625 -51494663 - AluJb SINE Alu 0 312 1 829 257 150 27 chr10 94095027 94095550 -51493738 + L2 LINE L2 2719 3309 -4 2474 67 0 3 chr10 94095585 94095883 -51493405 + AluY SINE Alu 1 297 -14 2093 117 4 0 chr10 94095892 94096165 -51493123 + AluSq SINE Alu 15 288 -25 410 265 45 35 chr10 94096178 94096378 -51492910 - L1M4 LINE L1 -3529 2617 2416 1471 251 122 47 chr10 94096393 94096902 -51492386 + MLT1H LTR MaLR 1 547 -2 1413 142 76 76 chr10 94097054 94097357 -51491931 - AluJb SINE Alu -9 303 1 1995 111 25 7 chr10 94097365 94097678 -51491610 - AluSx SINE Alu 0 318 1 410 216 0 41 chr10 94097689 94097786 -51491502 + L2 LINE L2 3172 3264 -49 1466 179 42 3 chr10 94097787 94098099 -51491189 + MER33 DNA MER1_type 1 324 0 2151 133 0 3 chr10 94098114 94098415 -51490873 + AluJb SINE Alu 1 300 -12 2351 127 74 72 chr10 94098461 94098710 -51490578 + L1MC2 LINE L1 5815 6062 -282 2164 117 14 7 chr10 94098710 94099000 -51490288 + AluSx SINE Alu 3 294 -18 2351 127 74 72 chr10 94099000 94099164 -51490124 + L1MC2 LINE L1 6062 6232 -112 2158 119 3 3 chr10 94099164 94099458 -51489830 + AluSx SINE Alu 1 294 -18 2351 127 74 72 chr10 94099458 94099572 -51489716 + L1MC2 LINE L1 6232 6344 0 23 0 0 0 chr10 94099647 94099670 -51489618 + AT_rich Low_complexity Low_complexity 1 23 0 731 133 39 23 chr10 94099960 94100088 -51489200 + AluJo SINE Alu 1 130 -172 2442 75 0 13 chr10 94100092 94100398 -51488890 + AluY SINE Alu 1 302 -9 2055 145 7 7 chr10 94100401 94100705 -51488583 + AluSx SINE Alu 1 304 -8 854 133 5 144 chr10 94100705 94100741 -51488547 + AluJo SINE Alu 134 173 -139 2442 101 62 0 chr10 94100741 94101096 -51488192 + MER51B LTR ERV1 1 377 0 854 133 5 144 chr10 94101096 94101254 -51488034 + AluJo SINE Alu 173 301 -11 2501 90 0 0 chr10 94101327 94101638 -51487650 + AluSq SINE Alu 1 311 -2 894 152 0 0 chr10 94102097 94102229 -51487059 + FRAM SINE Alu 26 157 -19 256 253 0 38 chr10 94102461 94102540 -51486748 - MIR SINE MIR -156 106 31 2631 36 13 0 chr10 94104358 94104663 -51484625 - AluY SINE Alu -2 309 1 2916 148 67 24 chr10 94105758 94106307 -51482981 + MER50 LTR ERV1 1 573 -161 1738 142 22 0 chr10 94106307 94106581 -51482707 - AluSx SINE Alu -2 310 31 447 136 159 11 chr10 94106581 94106669 -51482619 - LTR12 LTR ERV1 -133 581 481 316 224 31 20 chr10 94106671 94106769 -51482519 - LTR30 LTR ERV1 -80 642 544 323 125 23 23 chr10 94106801 94106889 -51482399 + C-rich Low_complexity Low_complexity 2 89 0 425 126 28 28 chr10 94106944 94107054 -51482234 - LTR12 LTR ERV1 -508 206 43 287 189 97 24 chr10 94107062 94107163 -51482125 - AluS SINE Alu -225 78 1 657 150 55 8 chr10 94107164 94107291 -51481997 + MER50 LTR ERV1 540 672 -62 2299 99 0 19 chr10 94107363 94107675 -51481613 - AluSg SINE Alu -4 306 1 2098 126 7 0 chr10 94108808 94109102 -51480186 - AluSg SINE Alu -14 296 1 2030 120 0 7 chr10 94109109 94109429 -51479859 - AluSx SINE Alu 0 318 1 613 199 30 15 chr10 94109768 94109899 -51479389 - FLAM_A SINE Alu 0 133 1 2318 104 0 3 chr10 94109910 94110209 -51479079 - AluSx SINE Alu -14 298 1 1451 181 91 18 chr10 94111528 94111804 -51477484 - AluJb SINE Alu -10 302 7 2241 114 3 3 chr10 94114107 94114405 -51474883 + AluSx SINE Alu 1 298 -14 651 140 0 0 chr10 94114458 94114551 -51474737 + AluJ/FLAM SINE Alu 2 94 -218 357 186 29 0 chr10 94114551 94114621 -51474667 + AluJo SINE Alu 66 137 -165 575 292 108 14 chr10 94114754 94115042 -51474246 - MER46C DNA MER2_type -22 316 2 605 157 52 45 chr10 94115775 94115909 -51473379 + AluJo SINE Alu 2 136 -176 2276 87 0 0 chr10 94115959 94116246 -51473042 + AluY SINE Alu 1 287 -24 2287 97 7 0 chr10 94116283 94116581 -51472707 + AluSx SINE Alu 2 301 -11 1923 118 11 4 chr10 94117396 94117659 -51471629 + AluSq SINE Alu 1 265 -48 2096 108 87 0 chr10 94117673 94117960 -51471328 + AluSq SINE Alu 1 312 -1 1764 167 3 10 chr10 94118023 94118317 -51470971 + AluJb SINE Alu 1 292 -20 2208 117 0 13 chr10 94118688 94119004 -51470284 + AluSx SINE Alu 1 312 0 2256 103 13 6 chr10 94119118 94119429 -51469859 - AluSq SINE Alu 0 313 1 442 258 149 16 chr10 94120536 94120730 -51468558 + MLT1J LTR MaLR 28 247 -264 1253 230 83 136 chr10 94121124 94121257 -51468031 + L1MC4 LINE L1 5806 5944 -1968 2331 82 3 0 chr10 94121257 94121548 -51467740 - AluSp SINE Alu -21 292 1 1253 230 83 136 chr10 94121548 94122643 -51466645 + L1MC4 LINE L1 5944 7052 -860 921 179 29 0 chr10 94122643 94122816 -51466472 + L1MA9 LINE L1 5934 6111 -201 2676 136 102 58 chr10 94122817 94123015 -51466273 + Tigger3b DNA MER2_type 2 190 -2838 2190 109 3 3 chr10 94123015 94123309 -51465979 + AluSp SINE Alu 2 295 -18 2676 136 102 58 chr10 94123309 94123661 -51465627 + Tigger3b DNA MER2_type 190 576 -655 488 65 52 0 chr10 94123662 94123739 -51465549 - Alu SINE Alu 0 311 231 1119 111 20 0 chr10 94123739 94123892 -51465396 - AluSq SINE Alu -155 158 3 3194 104 140 39 chr10 94123894 94124089 -51465199 + Tigger3b DNA MER2_type 547 721 -2308 1835 171 10 0 chr10 94124089 94124393 -51464895 + AluJb SINE Alu 1 307 -5 3194 104 140 39 chr10 94124393 94124820 -51464468 + Tigger3b DNA MER2_type 721 1232 0 263 306 0 0 chr10 94124911 94124983 -51464305 + C-rich Low_complexity Low_complexity 1 72 0 1933 131 31 10 chr10 94125136 94125427 -51463861 + AluSx SINE Alu 1 297 -15 1767 174 3 7 chr10 94126549 94126848 -51462440 + AluJb SINE Alu 1 298 -14 2390 77 0 16 chr10 94127485 94127795 -51461493 + AluY SINE Alu 1 305 -6 1995 215 114 123 chr10 94127925 94128322 -51460966 + L1MC4 LINE L1 6460 6859 -1183 692 85 32 0 chr10 94128322 94128416 -51460872 + U6 snRNA snRNA 1 97 -10 1995 215 114 123 chr10 94128416 94129365 -51459923 + L1MC4 LINE L1 6859 7886 -156 1038 211 5 10 chr10 94129403 94129597 -51459691 + MER20 DNA MER1_type 23 215 -4 1888 124 4 0 chr10 94129842 94130101 -51459187 + AluSx SINE Alu 34 293 -19 1044 253 78 9 chr10 94130634 94130657 -51458631 + L1MC4 LINE L1 6542 6562 -1331 2276 99 0 7 chr10 94130657 94130987 -51458301 + AluSx SINE Alu 1 312 0 1044 253 78 9 chr10 94130987 94131010 -51458278 + L1MC4 LINE L1 6562 6582 -1311 2536 72 0 0 chr10 94131010 94131314 -51457974 - AluY SINE Alu -6 305 2 1044 253 78 9 chr10 94131314 94131653 -51457635 + L1MC4 LINE L1 6582 7041 -852 1162 221 133 11 chr10 94131667 94132034 -51457254 - L1MA9 LINE L1 -38 6274 5863 529 309 76 44 chr10 94132057 94132623 -51456665 + L1MC5 LINE L1 7040 7522 -515 2356 70 0 17 chr10 94132653 94132953 -51456335 + AluY SINE Alu 3 297 -14 23 0 0 0 chr10 94133194 94133217 -51456071 + AT_rich Low_complexity Low_complexity 1 23 0 1031 172 10 15 chr10 94133398 94133596 -51455692 - AluJo SINE Alu -6 306 110 1989 138 0 3 chr10 94133596 94133885 -51455403 + AluSx SINE Alu 1 288 -24 3971 194 91 11 chr10 94133894 94134807 -51454481 + Charlie1a DNA MER1_type 95 1080 -375 1475 169 20 4 chr10 94135095 94135349 -51453939 + AluJb SINE Alu 35 292 -20 3608 154 55 104 chr10 94135359 94135709 -51453579 + L1MB4 LINE L1 4947 5313 -867 2124 126 3 0 chr10 94135709 94136010 -51453278 + AluSq SINE Alu 1 302 -11 3608 154 55 104 chr10 94136010 94136917 -51452371 + L1MB4 LINE L1 5313 6151 -29 1649 169 72 12 chr10 94139244 94139563 -51449725 - MER44D DNA MER2_type -1 608 1 1361 169 20 68 chr10 94141573 94141868 -51447420 - AluJo SINE Alu -31 281 1 345 267 82 89 chr10 94141902 94142217 -51447071 + L1MC4a LINE L1 5575 5887 -1921 190 189 38 0 chr10 94142593 94142646 -51446642 - MIR SINE MIR -55 153 99 2280 107 0 0 chr10 94142754 94143054 -51446234 + AluSg SINE Alu 1 300 -10 406 123 4 0 chr10 94143061 94143126 -51446162 + AluJ/FLAM SINE Alu 1 57 -245 305 287 16 49 chr10 94143209 94143331 -51445957 + L3 LINE CR1 1158 1275 -302 2319 95 0 3 chr10 94143348 94143644 -51445644 + AluY SINE Alu 2 296 -15 1848 159 0 14 chr10 94143764 94144059 -51445229 + AluSx SINE Alu 1 291 -21 300 265 83 66 chr10 94144189 94144271 -51445017 - MIR SINE MIR -11 251 172 2217 72 41 27 chr10 94144271 94144563 -51444725 + AluY SINE Alu 1 296 -15 300 265 83 66 chr10 94144563 94144588 -51444700 - MIR SINE MIR -90 172 149 932 218 173 7 chr10 94144588 94144877 -51444411 + MER46C DNA MER2_type 1 337 -1 300 265 83 66 chr10 94144877 94144949 -51444339 - MIR SINE MIR -113 149 68 256 260 24 61 chr10 94144981 94145164 -51444124 + L1ME LINE L1 5722 5789 -332 2160 105 26 13 chr10 94145400 94145706 -51443582 - AluSx SINE Alu -2 310 1 883 115 115 0 chr10 94145739 94145869 -51443419 + AluSg/x SINE Alu 137 281 -31 242 54 0 27 chr10 94145872 94145909 -51443379 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 487 232 62 57 chr10 94145922 94146133 -51443155 + L1MC4a LINE L1 5624 5835 -1973 34 96 0 0 chr10 94146133 94146237 -51443051 + AT_rich Low_complexity Low_complexity 1 104 0 1955 129 3 10 chr10 94146560 94146855 -51442433 + AluSx SINE Alu 1 293 -19 525 250 165 31 chr10 94147235 94147459 -51441829 + Charlie2 DNA MER1_type 9 262 -2520 1064 155 86 190 chr10 94147513 94147783 -51441505 + Charlie2 DNA MER1_type 1841 2137 -725 1780 113 88 7 chr10 94147783 94148057 -51441231 + AluSc SINE Alu 1 296 -13 455 228 133 51 chr10 94148067 94148225 -51441063 + FAM SINE Alu 4 174 -1 1064 155 86 190 chr10 94148225 94148547 -51440741 + Charlie2 DNA MER1_type 2146 2500 -362 727 146 0 80 chr10 94148547 94148684 -51440604 - FLAM_C SINE Alu -3 130 5 1913 119 84 7 chr10 94148689 94148975 -51440313 - AluSx SINE Alu -4 308 1 1064 155 86 190 chr10 94148975 94149233 -51440055 + Charlie2 DNA MER1_type 2504 2619 -243 22 35 0 0 chr10 94149283 94149312 -51439976 + AT_rich Low_complexity Low_complexity 1 29 0 1228 224 95 4 chr10 94149363 94149627 -51439661 + AluJb SINE Alu 1 288 -24 207 0 0 0 chr10 94149630 94149653 -51439635 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 333 296 63 25 chr10 94149671 94149830 -51439458 + L1ME3A LINE L1 6005 6169 -1 1664 160 7 56 chr10 94149881 94150187 -51439101 + AluJo SINE Alu 1 291 -21 221 250 0 0 chr10 94150405 94150469 -51438819 + A-rich Low_complexity Low_complexity 1 64 0 2423 82 7 0 chr10 94150474 94150778 -51438510 + AluSx SINE Alu 1 306 -6 359 305 70 96 chr10 94150953 94151649 -51437639 + L2 LINE L2 710 1387 -1927 741 294 120 35 chr10 94151936 94152144 -51437144 + L2 LINE L2 1906 2095 -1219 2403 35 56 3 chr10 94152144 94152431 -51436857 - AluY SINE Alu -9 302 1 741 294 120 35 chr10 94152431 94152757 -51436531 + L2 LINE L2 2095 2485 -829 2204 96 0 20 chr10 94153154 94153457 -51435831 - AluSg SINE Alu -13 297 1 2475 82 3 0 chr10 94153457 94153760 -51435528 - AluSg SINE Alu -6 304 1 1470 193 34 7 chr10 94154222 94154517 -51434771 - AluJo SINE Alu -9 303 1 497 160 14 139 chr10 94154552 94154696 -51434592 + AluJo SINE Alu 11 136 -176 239 205 223 36 chr10 94154897 94155009 -51434279 + MIR SINE MIR 59 191 -71 1480 199 50 0 chr10 94155040 94155337 -51433951 + AluJb SINE Alu 1 312 0 231 262 67 91 chr10 94156076 94156286 -51433002 + L1MC5 LINE L1 7713 7917 -44 749 128 0 0 chr10 94156433 94156542 -51432746 - AluSx SINE Alu -10 299 191 918 51 8 25 chr10 94156545 94156663 -51432625 - AluSx SINE Alu -174 138 23 1672 127 81 12 chr10 94156718 94157000 -51432288 - AluSg SINE Alu 0 303 4 2209 107 0 7 chr10 94158366 94158676 -51430612 + AluSq SINE Alu 1 308 -5 206 221 88 44 chr10 94158708 94158776 -51430512 + L2 LINE L2 3243 3313 0 * 275 187 240 0 chr10 94158775 94158850 -51430438 + MIR SINE MIR 55 147 -61 1990 144 3 0 chr10 94158889 94159180 -51430108 + AluSx SINE Alu 1 292 -20 2598 30 0 10 chr10 94160164 94160468 -51428820 + AluYa5 SINE Alu 11 311 0 2303 239 159 25 chr10 94160475 94161746 -51427542 - L2 LINE L2 -159 3154 1722 183 259 210 25 chr10 94161830 94161911 -51427377 - L2 LINE L2 -1797 1517 1422 245 339 60 48 chr10 94161936 94162104 -51427184 - L1ME3A LINE L1 -35 6204 6035 1909 161 0 23 chr10 94162116 94162426 -51426862 - AluSx SINE Alu -9 303 1 950 248 58 53 chr10 94162475 94162887 -51426401 - L1ME3A LINE L1 -215 6024 5611 366 189 136 0 chr10 94162888 94163009 -51426279 - L1ME3A LINE L1 -894 5534 5376 442 291 196 0 chr10 94163011 94163169 -51426119 - MLT1H1 LTR MaLR 0 595 407 * 692 273 84 6 chr10 94163167 94163388 -51425900 - MLT1H1 LTR MaLR -316 279 4 869 300 72 17 chr10 94163514 94164030 -51425258 - L1ME3A LINE L1 -1007 5208 4665 2433 248 94 73 chr10 94164153 94164450 -51424838 - L1MEc LINE L1 -2251 3964 3675 2533 68 6 0 chr10 94164450 94164761 -51424527 - AluSp SINE Alu 0 313 1 2433 248 94 73 chr10 94164761 94165419 -51423869 - L1MEc LINE L1 -2540 3675 3032 2441 51 0 7 chr10 94165419 94165715 -51423573 - AluY SINE Alu 0 311 18 2433 248 94 73 chr10 94165715 94165847 -51423441 - L1MEc LINE L1 -3183 3032 2904 2224 110 3 22 chr10 94165847 94166166 -51423122 + AluSq SINE Alu 1 313 0 2433 248 94 73 chr10 94166166 94166207 -51423081 - L1MEc LINE L1 -3311 2904 2865 2186 135 0 0 chr10 94166207 94166503 -51422785 - AluSx SINE Alu -16 296 1 2433 248 94 73 chr10 94166503 94167158 -51422130 - L1MEc LINE L1 -3350 2865 2183 906 248 70 44 chr10 94167404 94167816 -51421472 - L1MEc LINE L1 -4576 1820 1398 355 240 30 10 chr10 94167824 94167924 -51421364 - L2 LINE L2 -3025 289 188 325 327 113 45 chr10 94168004 94168340 -51420948 - L2 LINE L2 -5 3267 2909 3702 112 18 9 chr10 94168882 94169155 -51420133 - L1MB3 LINE L1 -2 6181 5912 1792 183 3 7 chr10 94169155 94169461 -51419827 - AluJb SINE Alu -7 305 1 3702 112 18 9 chr10 94169461 94169748 -51419540 - L1MB3 LINE L1 -271 5912 5616 3216 137 45 19 chr10 94169748 94169850 -51419438 + LTR24B LTR ERV1 4 102 -474 2287 126 0 0 chr10 94169850 94170160 -51419128 + AluSx SINE Alu 1 310 -2 3216 137 45 19 chr10 94170160 94170596 -51418692 + LTR24B LTR ERV1 102 556 -20 1779 123 62 9 chr10 94170604 94170929 -51418359 - L1MB3 LINE L1 -561 5622 5281 904 229 64 8 chr10 94171405 94171641 -51417647 + MIR SINE MIR 11 259 -3 1030 269 52 39 chr10 94172906 94173363 -51415925 + L1ME4a LINE L1 5411 5873 -248 345 297 39 45 chr10 94173376 94173531 -51415757 - L2 LINE L2 0 3313 3160 295 268 0 0 chr10 94173580 94173662 -51415626 + L1ME4a LINE L1 5962 6043 -78 855 238 119 11 chr10 94174565 94174842 -51414446 - MLT1D LTR MaLR -187 318 12 2321 104 7 0 chr10 94175319 94175627 -51413661 + AluSx SINE Alu 3 312 0 210 229 36 24 chr10 94178129 94178212 -51411076 + A-rich Low_complexity Low_complexity 2 85 0 1880 152 7 13 chr10 94178355 94178657 -51410631 + AluJb SINE Alu 6 305 -7 183 255 20 0 chr10 94179407 94179458 -51409830 + MIR SINE MIR 200 251 -11 200 236 38 113 chr10 94179618 94179724 -51409564 + MIR3 SINE MIR 96 193 -15 342 0 0 0 chr10 94180763 94180801 -51408487 + (TG)n Simple_repeat Simple_repeat 2 39 0 326 266 133 61 chr10 94181113 94181376 -51407912 + L2 LINE L2 2902 3183 -89 230 179 0 64 chr10 94182341 94182419 -51406869 + C-rich Low_complexity Low_complexity 4 76 0 30 27 0 0 chr10 94182993 94183030 -51406258 + AT_rich Low_complexity Low_complexity 1 37 0 1439 195 7 14 chr10 94183123 94183415 -51405873 - AluJb SINE Alu -22 290 1 181 239 65 0 chr10 94183582 94183628 -51405660 - MIR SINE MIR -136 126 78 2126 79 3 16 chr10 94184091 94184394 -51404894 - AluY SINE Alu -12 299 1 1672 155 14 14 chr10 94184618 94184914 -51404374 - AluJb SINE Alu -16 296 1 27 29 0 0 chr10 94184949 94184983 -51404305 + AT_rich Low_complexity Low_complexity 1 34 0 1149 137 15 29 chr10 94185099 94185233 -51404055 + AluSq SINE Alu 2 133 -180 2119 97 0 10 chr10 94185233 94185552 -51403736 + AluSx SINE Alu 1 312 0 1149 137 15 29 chr10 94185552 94185622 -51403666 + AluSq SINE Alu 133 203 -110 2451 68 0 0 chr10 94185658 94185965 -51403323 - AluY SINE Alu -3 308 2 966 256 29 8 chr10 94185984 94186304 -51402984 + L1MC4 LINE L1 6666 7041 -1001 1154 223 133 11 chr10 94186318 94186685 -51402603 - L1MA9 LINE L1 -38 6274 5863 525 310 75 44 chr10 94186708 94187274 -51402014 + L1MC5 LINE L1 7040 7522 -515 2225 70 0 17 chr10 94187304 94187604 -51401684 + AluY SINE Alu 3 297 -14 300 250 137 88 chr10 94187845 94188049 -51401239 + L1ME4a LINE L1 5864 6077 -44 964 182 10 5 chr10 94188049 94188247 -51401041 - AluJo SINE Alu -4 308 110 1871 138 0 3 chr10 94188247 94188536 -51400752 + AluSx SINE Alu 1 288 -24 3924 194 91 11 chr10 94188545 94189458 -51399830 + Charlie1a DNA MER1_type 95 1080 -375 1376 169 20 4 chr10 94189746 94190000 -51399288 + AluJb SINE Alu 35 292 -20 3569 154 55 104 chr10 94190010 94190360 -51398928 + L1MB4 LINE L1 4947 5313 -867 2002 126 3 0 chr10 94190360 94190661 -51398627 + AluSq SINE Alu 1 302 -11 3569 154 55 104 chr10 94190661 94191568 -51397720 + L1MB4 LINE L1 5313 6151 -29 1632 169 72 12 chr10 94193895 94194214 -51395074 - MER44D DNA MER2_type -1 608 1 1260 169 20 68 chr10 94196224 94196519 -51392769 - AluJo SINE Alu -31 281 1 327 267 82 89 chr10 94196553 94196868 -51392420 + L1MC4 LINE L1 5575 5887 -1921 301 288 43 74 chr10 94197024 94197187 -51392101 + L1MC4 LINE L1 6546 6703 -1339 210 189 38 0 chr10 94197244 94197297 -51391991 - MIR SINE MIR -55 153 99 2159 107 0 0 chr10 94197405 94197705 -51391583 + AluSg SINE Alu 1 300 -10 405 107 0 0 chr10 94197716 94197772 -51391516 + AluJ/FLAM SINE Alu 2 57 -255 353 287 16 49 chr10 94197860 94197982 -51391306 + L3 LINE CR1 1158 1275 -302 2193 95 0 3 chr10 94197999 94198295 -51390993 + AluY SINE Alu 2 296 -15 1735 159 0 14 chr10 94198415 94198710 -51390578 + AluSx SINE Alu 1 291 -21 370 265 83 66 chr10 94198840 94198922 -51390366 - MIR SINE MIR -11 251 172 2053 72 41 31 chr10 94198922 94199215 -51390073 + AluY SINE Alu 1 296 -15 370 265 83 66 chr10 94199215 94199240 -51390048 - MIR SINE MIR -90 172 149 918 218 173 7 chr10 94199240 94199529 -51389759 + MER46C DNA MER2_type 1 337 -1 370 265 83 66 chr10 94199529 94199601 -51389687 - MIR SINE MIR -113 149 68 248 260 24 61 chr10 94199633 94199816 -51389472 + L1ME LINE L1 5722 5789 -332 1360 94 38 19 chr10 94200052 94200265 -51389023 - AluSg/x SINE Alu -2 308 92 406 148 0 0 chr10 94200388 94200479 -51388809 + AluS SINE Alu 224 314 0 831 148 0 0 chr10 94200551 94200696 -51388592 - FLAM_C SINE Alu 0 145 1 180 0 0 0 chr10 94200828 94200848 -51388440 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 2138 104 3 0 chr10 94200850 94201139 -51388149 - AluSx SINE Alu -20 292 3 696 262 123 64 chr10 94201441 94201858 -51387430 - MLT1F1 LTR MaLR -2 547 62 2279 107 0 0 chr10 94201858 94202166 -51387122 - AluSq SINE Alu -5 308 1 696 262 123 64 chr10 94202166 94202232 -51387056 - MLT1F1 LTR MaLR -487 62 1 245 339 31 4 chr10 94202488 94202592 -51386696 + MIR SINE MIR 17 118 -90 935 231 24 5 chr10 94202597 94202809 -51386479 - LTR33 LTR ERVL -2 519 304 383 200 171 9 chr10 94202945 94203050 -51386238 - LTR33 LTR ERVL -399 122 1 2084 115 7 0 chr10 94203195 94203491 -51385797 + AluSx SINE Alu 1 298 -14 789 117 78 0 chr10 94203754 94203882 -51385406 - AluSx SINE Alu 0 310 173 652 103 0 0 chr10 94203879 94203966 -51385322 - AluSx SINE Alu -224 88 2 * 21 0 0 0 chr10 94204534 94204555 -51384733 + AT_rich Low_complexity Low_complexity 1 21 0 620 141 0 0 chr10 94204555 94204654 -51384634 - FRAM SINE Alu -20 156 58 2038 106 41 101 chr10 94204654 94205041 -51384247 - THE1B LTR MaLR 0 364 1 6307 96 29 0 chr10 94205041 94205874 -51383414 - THE1B-int LTR MaLR 0 1580 724 329 178 85 123 chr10 94205882 94205988 -51383300 - AluS SINE Alu -246 57 1 2252 85 0 3 chr10 94205995 94206290 -51382998 - AluSx SINE Alu -16 296 3 1611 151 30 23 chr10 94206653 94206952 -51382336 + AluJb SINE Alu 7 307 -5 1343 168 82 86 chr10 94207005 94207457 -51381831 - LTR7 LTR ERV1 0 450 1 3558 107 35 9 chr10 94207457 94208000 -51381288 - HERVH LTR ERV1 0 7713 7157 1700 126 0 0 chr10 94207993 94208254 -51381034 - HERVH LTR ERV1 -1697 6016 5756 * 4129 158 14 9 chr10 94208244 94209497 -51379791 - HERVH LTR ERV1 -1935 4719 3357 * 12996 127 9 28 chr10 94209493 94211569 -51377719 - HERVH LTR ERV1 -4876 2837 800 2050 172 57 27 chr10 94211591 94212068 -51377220 - HERVH LTR ERV1 -7254 459 1 847 154 147 24 chr10 94212068 94212426 -51376862 - LTR7 LTR ERV1 0 450 1 4526 125 42 50 chr10 94212798 94213056 -51376232 - MER4E LTR ERV1 0 779 521 1780 127 83 0 chr10 94213056 94213332 -51375956 - AluSx SINE Alu -13 299 1 4526 125 42 50 chr10 94213332 94213716 -51375572 - MER4E LTR ERV1 -258 521 136 2059 125 0 3 chr10 94213716 94214027 -51375261 + AluSx SINE Alu 1 310 -2 4526 125 42 50 chr10 94214027 94214123 -51375165 - MER4E LTR ERV1 -643 136 44 2516 40 0 0 chr10 94214123 94214423 -51374865 + AluY SINE Alu 1 300 -11 4526 125 42 50 chr10 94214423 94214467 -51374821 - MER4E LTR ERV1 -735 44 1 3636 102 118 50 chr10 94214884 94215531 -51373757 - LTR8 LTR ERV1 0 691 1 352 176 125 81 chr10 94215896 94215932 -51373356 + L1MB4 LINE L1 5416 5449 -720 2224 100 0 7 chr10 94215932 94216242 -51373046 - AluSq SINE Alu 0 313 6 352 176 125 81 chr10 94216242 94216323 -51372965 + L1MB4 LINE L1 5449 5538 -631 616 141 0 10 chr10 94216325 94216424 -51372864 + MER4A LTR ERV1 1 98 -566 336 122 11 7 chr10 94216424 94216516 -51372772 + MER4A LTR ERV1 261 415 -249 2043 100 4 4 chr10 94216535 94216816 -51372472 - AluSq SINE Alu -32 281 1 262 53 53 0 chr10 94216818 94216856 -51372432 + MER4A LTR ERV1 407 446 -218 1549 130 4 9 chr10 94216901 94217131 -51372157 + MER4B LTR ERV1 382 610 0 615 154 15 31 chr10 94217134 94217178 -51372110 + L1MB4 LINE L1 5540 5583 -600 2187 103 3 0 chr10 94217178 94217470 -51371818 - AluSp SINE Alu -20 293 1 615 154 15 31 chr10 94217470 94217555 -51371733 + L1MB4 LINE L1 5583 5667 -516 2349 75 0 0 chr10 94217555 94217860 -51371428 + AluSq SINE Alu 1 305 -8 1017 126 42 0 chr10 94217868 94218035 -51371253 + L1MB4 LINE L1 5968 6141 -39 2015 97 0 52 chr10 94218037 94218185 -51371103 + AluSx SINE Alu 1 126 -186 1110 37 0 0 chr10 94218185 94218320 -51370968 + L1PA4 LINE L1 6018 6152 -3 2015 97 0 52 chr10 94218320 94218479 -51370809 + AluSx SINE Alu 126 292 -20 1681 150 56 3 chr10 94218607 94218894 -51370394 - AluSx SINE Alu -8 304 3 324 0 0 0 chr10 94219266 94219302 -51369986 + (TC)n Simple_repeat Simple_repeat 1 36 0 225 0 0 0 chr10 94219301 94219326 -51369962 + (CA)n Simple_repeat Simple_repeat 1 25 0 * 2157 110 0 0 chr10 94219390 94219691 -51369597 - AluSx SINE Alu -11 301 1 348 244 61 84 chr10 94219809 94220022 -51369266 - LTR67 LTR ERVL 0 557 350 801 216 0 23 chr10 94220598 94220774 -51368514 - AluJb SINE Alu -5 307 136 392 0 21 0 chr10 94220934 94220982 -51368306 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 697 124 0 19 chr10 94220982 94221087 -51368201 - FLAM_C SINE Alu -23 120 18 413 229 7 36 chr10 94221093 94221233 -51368055 - L1MC4a LINE L1 -1819 5989 5854 1556 169 4 4 chr10 94221254 94221520 -51367768 - AluJb SINE Alu -35 277 12 2314 103 0 0 chr10 94221735 94222047 -51367241 + AluSx SINE Alu 1 312 0 355 262 54 7 chr10 94222053 94222202 -51367086 - L1MC4a LINE L1 -2012 5796 5641 22 35 0 0 chr10 94222206 94222235 -51367053 + AT_rich Low_complexity Low_complexity 1 29 0 1121 240 43 0 chr10 94222258 94222516 -51366772 - L1MC4a LINE L1 -2129 5679 5411 1873 144 3 0 chr10 94222516 94222814 -51366474 + AluSx SINE Alu 14 312 0 379 250 0 0 chr10 94222819 94222915 -51366373 + L1M LINE L1 5327 5422 -2386 1865 129 28 0 chr10 94222916 94223203 -51366085 - AluSx SINE Alu -17 295 1 232 167 0 0 chr10 94223257 94223305 -51365983 + (TTG)n Simple_repeat Simple_repeat 1 48 0 757 165 19 96 chr10 94223305 94223321 -51365967 - L1MC4a LINE L1 -824 5322 5306 753 147 0 66 chr10 94223321 94223457 -51365831 - FLAM_C SINE Alu -6 127 1 757 165 19 96 chr10 94223457 94223571 -51365717 - L1MC4a LINE L1 -840 5306 5185 216 0 0 0 chr10 94223571 94223595 -51365693 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1809 143 4 0 chr10 94223598 94223871 -51365417 - AluSx SINE Alu -34 278 5 757 165 19 96 chr10 94223871 94223995 -51365293 - L1MC4a LINE L1 -963 5183 5083 * 1304 180 14 10 chr10 94223994 94224016 -51365272 - L1MCa LINE L1 -5062 845 825 2213 104 3 0 chr10 94224016 94224325 -51364963 - AluSq SINE Alu -3 310 1 1304 180 14 10 chr10 94224325 94224499 -51364789 - L1MCa LINE L1 -5082 825 648 1821 162 3 10 chr10 94224499 94224677 -51364611 - AluJo SINE Alu 0 312 135 1690 87 101 7 chr10 94224677 94224953 -51364335 - AluSc SINE Alu -7 302 1 1821 162 3 10 chr10 94224953 94225088 -51364200 - AluJo SINE Alu -177 135 1 1304 180 14 10 chr10 94225088 94225154 -51364134 - L1MCa LINE L1 -5259 648 584 818 66 123 0 chr10 94225201 94225323 -51363965 + MER85 DNA T2_type 1 137 -2 803 173 0 0 chr10 94225347 94225480 -51363808 - FLAM_A SINE Alu 0 133 1 1320 194 9 0 chr10 94226042 94226264 -51363024 + MER58A DNA MER1_type 1 224 0 1694 272 25 20 chr10 94226426 94226775 -51362513 - LTR16C LTR ERVL 0 491 138 2099 106 6 37 chr10 94226775 94227097 -51362191 - AluSx SINE Alu 0 312 1 1694 272 25 20 chr10 94227097 94227236 -51362052 - LTR16C LTR ERVL -353 138 1 2072 107 0 17 chr10 94227598 94227898 -51361390 - AluSx SINE Alu -17 295 1 1937 114 0 4 chr10 94228065 94228337 -51360951 - AluSq SINE Alu -32 281 11 2085 96 0 54 chr10 94228359 94228673 -51360615 - AluSp SINE Alu -11 302 6 701 124 0 0 chr10 94228884 94228989 -51360299 + AluSg/x SINE Alu 208 312 0 355 262 54 7 chr10 94228995 94229144 -51360144 - L1MC/D LINE L1 -2012 5796 5641 22 35 0 0 chr10 94229148 94229177 -51360111 + AT_rich Low_complexity Low_complexity 1 29 0 1130 238 42 0 chr10 94229200 94229458 -51359830 - L1MC/D LINE L1 -2129 5679 5408 1966 101 3 34 chr10 94229458 94229754 -51359534 + AluSx SINE Alu 14 300 -12 425 256 53 48 chr10 94229758 94229965 -51359323 - L1MC/D LINE L1 -2010 5798 5591 * 319 246 0 15 chr10 94230058 94230123 -51359165 - L1MC/D LINE L1 -2453 5355 5292 29 60 0 0 chr10 94230110 94230160 -51359128 + AT_rich Low_complexity Low_complexity 1 50 0 * 924 103 0 8 chr10 94232422 94232548 -51356740 - FLAM_C SINE Alu -18 125 1 386 250 45 32 chr10 94232699 94232855 -51356433 + MIR3 SINE MIR 2 159 -49 2207 117 0 3 chr10 94233594 94233901 -51355387 + AluSq SINE Alu 1 306 -7 2375 96 0 0 chr10 94233903 94234204 -51355084 + AluSx SINE Alu 1 301 -11 603 215 0 16 chr10 94234393 94234514 -51354774 + FLAM_C SINE Alu 2 120 -23 2190 120 0 0 chr10 94234529 94234841 -51354447 + AluSx SINE Alu 1 312 0 226 367 42 0 chr10 94234841 94234961 -51354327 + L1MC/D LINE L1 5634 5758 -2050 303 233 83 17 chr10 94235286 94235406 -51353882 - MIR SINE MIR -70 192 65 2382 80 3 3 chr10 94235447 94235749 -51353539 + AluY SINE Alu 1 302 -9 2190 120 7 0 chr10 94235966 94236265 -51353023 - AluSx SINE Alu -11 301 1 2223 131 113 5 chr10 94236382 94236772 -51352516 - MSTB1 LTR MaLR 0 432 1 2224 88 10 20 chr10 94236833 94237128 -51352160 + AluSq SINE Alu 1 292 -21 2782 94 3 0 chr10 94237424 94237787 -51351501 + THE1B LTR MaLR 1 364 0 24 32 0 0 chr10 94237832 94237863 -51351425 + AT_rich Low_complexity Low_complexity 1 31 0 293 194 0 0 chr10 94238010 94238071 -51351217 + MIR SINE MIR 53 114 -94 355 279 85 0 chr10 94238236 94238365 -51350923 - MER20 DNA MER1_type -1 218 79 2140 145 0 3 chr10 94238365 94238675 -51350613 - AluSg SINE Alu -1 309 1 230 250 17 0 chr10 94239924 94239984 -51349304 - MER103 DNA DNA -44 122 62 1551 195 0 14 chr10 94239986 94240263 -51349025 + AluJo SINE Alu 1 273 -39 734 159 13 51 chr10 94240264 94240294 -51348994 + GA-rich Low_complexity Low_complexity 1 31 -564 2190 133 0 19 chr10 94240294 94240611 -51348677 + AluSx SINE Alu 1 311 -1 734 159 13 51 chr10 94240611 94240883 -51348405 + GA-rich Low_complexity Low_complexity 31 595 0 3881 186 116 25 chr10 94241042 94242230 -51347058 - L1 LINE L1 -1724 4422 2962 581 100 0 30 chr10 94242868 94242968 -51346320 + AluSp/q SINE Alu 209 305 -8 624 186 4 153 chr10 94243015 94243257 -51346031 + MLT1C LTR MaLR 185 467 0 1992 120 0 4 chr10 94243479 94243746 -51345542 + AluSx SINE Alu 1 266 -46 1953 111 15 4 chr10 94244935 94245233 -51344055 + AluSx SINE Alu 11 311 0 2148 137 41 22 chr10 94245656 94246071 -51343217 + L1MD1 LINE L1 5819 6241 -1 2435 68 3 19 chr10 94246074 94246381 -51342907 + AluSg SINE Alu 1 302 -8 436 93 0 0 chr10 94246381 94246435 -51342853 + (TA)n Simple_repeat Simple_repeat 2 55 0 3141 176 142 3 chr10 94246435 94247081 -51342207 + L1MB7 LINE L1 5427 6162 -22 708 262 48 59 chr10 94247143 94247414 -51341874 + Charlie2 DNA MER1_type 1856 2123 -739 2464 57 3 3 chr10 94247414 94247710 -51341578 - AluY SINE Alu -15 296 1 21 36 0 0 chr10 94248055 94248083 -51341205 + AT_rich Low_complexity Low_complexity 1 28 0 1019 139 109 52 chr10 94248358 94248564 -51340724 + MER33 DNA MER1_type 6 232 -2353 702 126 109 25 chr10 94248564 94248683 -51340605 + FLAM_C SINE Alu 1 129 -4 1019 139 109 52 chr10 94248683 94248743 -51340545 + MER33 DNA MER1_type 232 287 -37 2450 82 7 0 chr10 94248828 94249131 -51340157 + AluSg SINE Alu 1 305 -5 347 206 0 0 chr10 94249227 94249290 -51339998 + MER103 DNA DNA 52 114 -52 1579 153 24 38 chr10 94249609 94249897 -51339391 - AluJo SINE Alu -13 299 16 228 35 0 0 chr10 94250032 94250061 -51339227 + (A)n Simple_repeat Simple_repeat 1 29 0 194 0 0 114 chr10 94250065 94250100 -51339188 + (C)n Simple_repeat Simple_repeat 1 31 0 21 0 0 0 chr10 94251299 94251320 -51337968 + GC_rich Low_complexity Low_complexity 1 21 0 29 70 0 0 chr10 94251457 94251514 -51337774 + GC_rich Low_complexity Low_complexity 1 57 0 23 78 0 0 chr10 94251539 94251590 -51337698 + GC_rich Low_complexity Low_complexity 1 51 0 410 211 234 8 chr10 94252702 94252830 -51336458 - MIR SINE MIR -59 203 47 218 229 21 0 chr10 94253931 94253979 -51335309 - L2 LINE L2 -81 3191 3143 376 359 30 4 chr10 94254644 94254906 -51334382 - L1M4 LINE L1 -2482 3664 3396 189 0 0 0 chr10 94255173 94255194 -51334094 + (T)n Simple_repeat Simple_repeat 1 21 0 1905 126 61 0 chr10 94255225 94255519 -51333769 - AluSx SINE Alu 0 312 1 541 204 88 15 chr10 94255884 94256021 -51333267 - MER104 DNA Tc2 -27 153 7 1004 32 103 0 chr10 94256555 94256681 -51332607 - MER85 DNA T2_type 0 139 1 535 295 79 16 chr10 94256740 94256994 -51332294 - L2 LINE L2 -830 2484 2215 368 247 177 70 chr10 94257034 94257220 -51332068 - MLT1K LTR MaLR -12 576 371 2086 110 3 3 chr10 94257342 94257642 -51331646 - AluSx SINE Alu -12 300 1 2356 85 3 0 chr10 94257883 94258177 -51331111 - AluSg SINE Alu -15 295 1 2500 57 3 3 chr10 94258774 94259074 -51330214 - AluY SINE Alu -11 300 1 21 36 0 0 chr10 94259418 94259446 -51329842 + AT_rich Low_complexity Low_complexity 1 28 0 1019 139 109 52 chr10 94259719 94259925 -51329363 + MER33 DNA MER1_type 6 232 -2353 702 126 109 25 chr10 94259925 94260044 -51329244 + FLAM_C SINE Alu 1 129 -4 1019 139 109 52 chr10 94260044 94260104 -51329184 + MER33 DNA MER1_type 232 287 -37 2450 82 7 0 chr10 94260189 94260492 -51328796 + AluSg SINE Alu 1 305 -5 347 206 0 0 chr10 94260588 94260651 -51328637 + MER103 DNA DNA 52 114 -52 1656 152 17 38 chr10 94260970 94261260 -51328028 - AluJo SINE Alu -13 299 16 413 324 80 31 chr10 94261261 94261601 -51327687 - L1ME LINE L1 -320 5801 5479 1595 58 48 14 chr10 94261601 94261809 -51327479 - AluY SINE Alu -14 297 83 2258 105 0 0 chr10 94261809 94262105 -51327183 - AluSc SINE Alu -13 296 1 413 324 80 31 chr10 94262105 94262148 -51327140 - L1ME LINE L1 -641 5480 5448 1803 167 7 0 chr10 94262390 94262672 -51326616 + AluJo SINE Alu 11 294 -18 240 253 112 90 chr10 94262718 94262896 -51326392 + LTR48B LTR ERV1 145 326 -318 235 238 79 40 chr10 94263067 94263168 -51326120 + MER34 LTR ERV1 438 542 0 579 230 53 32 chr10 94263758 94263945 -51325343 + MIR SINE MIR 65 255 -7 791 194 0 36 chr10 94264267 94264432 -51324856 + FAM SINE Alu 1 44 -5 1766 157 11 0 chr10 94264993 94265273 -51324015 + AluJb SINE Alu 1 283 -29 756 181 28 0 chr10 94265273 94265417 -51323871 + AluJo/FRAM SINE Alu 161 308 -4 873 203 21 11 chr10 94266417 94266604 -51322684 - MIR SINE MIR -73 189 1 198 0 0 0 chr10 94266739 94266761 -51322527 + (ATTG)n Simple_repeat Simple_repeat 4 25 0 698 210 11 57 chr10 94266761 94266929 -51322359 - AluJb SINE Alu -31 281 120 2569 63 0 0 chr10 94267110 94267413 -51321875 - AluY SINE Alu -8 303 1 300 250 83 38 chr10 94267790 94267922 -51321366 - L1ME4a LINE L1 0 6121 5984 2284 106 3 13 chr10 94268290 94268601 -51320687 + AluSx SINE Alu 1 308 -4 2371 87 7 0 chr10 94268835 94269133 -51320155 - AluSx SINE Alu -12 300 1 323 320 112 45 chr10 94269662 94270190 -51319098 + L1M4 LINE L1 3730 4292 -1854 1521 222 92 12 chr10 94271059 94271482 -51317806 - Charlie4a DNA MER1_type -51 457 1 1483 268 113 53 chr10 94271487 94272272 -51317016 + L2 LINE L2 357 1188 -2126 1705 174 10 13 chr10 94272282 94272581 -51316707 + AluJb SINE Alu 3 300 -12 311 157 48 24 chr10 94272586 94272669 -51316619 - L1MB1 LINE L1 -52 6137 6053 2199 103 24 0 chr10 94272715 94273007 -51316281 + AluSp SINE Alu 1 299 -14 337 130 0 0 chr10 94273051 94273105 -51316183 - L1MA5A LINE L1 -22 6275 6222 906 145 35 7 chr10 94273107 94273252 -51316036 - MER30 DNA MER1_type 0 230 82 29 0 0 0 chr10 94273268 94273297 -51315991 + AT_rich Low_complexity Low_complexity 1 29 0 738 189 8 0 chr10 94273301 94273423 -51315865 - AluSq/x SINE Alu -186 126 4 660 74 0 0 chr10 94273430 94273511 -51315777 - MER30 DNA MER1_type -148 82 2 2282 111 67 18 chr10 94273513 94273900 -51315388 - L1MA5A LINE L1 -71 6226 5821 803 188 0 0 chr10 94273918 94274051 -51315237 - AluSq/x SINE Alu -180 133 1 1798 172 36 32 chr10 94274053 94274502 -51314786 - L1MA5A LINE L1 -468 5829 5254 545 49 111 0 chr10 94274506 94274587 -51314701 - L1M1 LINE L1 -818 5482 5393 1606 201 0 7 chr10 94274587 94274885 -51314403 - AluJo SINE Alu -16 296 1 720 201 19 26 chr10 94274886 94275040 -51314248 - FRAM SINE Alu -11 165 13 2464 175 30 93 chr10 94275062 94275426 -51313862 - L1 LINE L1 -758 5388 5003 2438 57 0 20 chr10 94275426 94275722 -51313566 - AluSg SINE Alu -20 290 1 2464 175 30 93 chr10 94275722 94275803 -51313485 - L1 LINE L1 -1143 5003 4918 328 129 16 0 chr10 94275803 94275865 -51313423 - Charlie5 DNA MER1_type -22 2590 2528 950 156 167 85 chr10 94275866 94276136 -51313152 - AluSg SINE Alu -7 293 2 2464 175 30 93 chr10 94276136 94276597 -51312691 - L1 LINE L1 -1227 4919 4558 * 9359 192 108 33 chr10 94276580 94276837 -51312451 - L1MB2 LINE L1 -91 6080 5844 2304 88 16 13 chr10 94276837 94277145 -51312143 - AluSx SINE Alu -3 309 1 9359 192 108 33 chr10 94277145 94278571 -51310717 - L1MB2 LINE L1 -327 5844 4527 1393 158 158 0 chr10 94278571 94278830 -51310458 - AluJo SINE Alu -2 300 1 9359 192 108 33 chr10 94278830 94280283 -51309005 - L1MB2 LINE L1 -1644 4527 2649 2073 116 13 3 chr10 94280283 94280584 -51308704 - AluSp SINE Alu -9 304 1 9359 192 108 33 chr10 94280584 94280786 -51308502 - L1MB2 LINE L1 -3522 2649 2464 1785 267 241 28 chr10 94280786 94281797 -51307491 + L2 LINE L2 1147 2373 -941 1819 143 159 8 chr10 94282597 94282969 -51306319 - MSTA LTR MaLR 0 428 1 406 237 53 61 chr10 94283470 94283594 -51305694 + Charlie2 DNA MER1_type 46 169 -2693 2079 126 3 3 chr10 94283594 94283887 -51305401 - AluSq SINE Alu -18 295 3 406 237 53 61 chr10 94283887 94284007 -51305281 + Charlie2 DNA MER1_type 169 288 -2574 3363 178 102 20 chr10 94284008 94284413 -51304875 + L1MB7 LINE L1 4860 5231 -953 2204 129 0 3 chr10 94284413 94284716 -51304572 + AluSx SINE Alu 1 302 -10 3363 178 102 20 chr10 94284716 94284857 -51304431 + L1MB7 LINE L1 5231 5359 -825 2474 64 0 19 chr10 94284857 94285171 -51304117 + AluY SINE Alu 1 308 -3 432 0 0 0 chr10 94285171 94285219 -51304069 + (TA)n Simple_repeat Simple_repeat 2 49 0 3363 178 102 20 chr10 94285219 94285865 -51303423 + L1MB7 LINE L1 5358 6162 -22 840 236 60 86 chr10 94285927 94286198 -51303090 + Charlie2 DNA MER1_type 1856 2113 -749 2336 81 0 3 chr10 94286198 94286494 -51302794 - AluSg SINE Alu -15 295 1 840 236 60 86 chr10 94286494 94286654 -51302634 + Charlie2 DNA MER1_type 2113 2276 -586 423 149 0 0 chr10 94286654 94286728 -51302560 + (TTCC)n Simple_repeat Simple_repeat 1 74 0 1594 140 22 18 chr10 94286729 94287001 -51302287 - AluSx SINE Alu -39 273 1 277 211 12 88 chr10 94287001 94287046 -51302242 + Charlie2 DNA MER1_type 2258 2305 -557 2134 133 3 0 chr10 94287046 94287347 -51301941 - AluSc SINE Alu -7 302 1 277 211 12 88 chr10 94287347 94287472 -51301816 + Charlie2 DNA MER1_type 2305 2415 -447 863 160 0 0 chr10 94287496 94287627 -51301661 + FLAM_C SINE Alu 1 131 -12 400 205 256 5 chr10 94287639 94287834 -51301454 + Charlie2 DNA MER1_type 2450 2693 -169 269 268 49 0 chr10 94287834 94287916 -51301372 + MIR SINE MIR 87 172 -90 2185 78 57 0 chr10 94288348 94288630 -51300658 - AluSq SINE Alu -15 298 1 1722 190 55 39 chr10 94288690 94289179 -51300109 - MLT1D LTR MaLR -8 497 1 278 267 86 19 chr10 94289265 94289370 -51299918 + MIR SINE MIR 42 153 -109 212 219 178 27 chr10 94289438 94289511 -51299777 + MIR SINE MIR 106 189 -73 183 152 0 0 chr10 94289791 94289837 -51299451 + (TA)n Simple_repeat Simple_repeat 1 46 0 2127 119 3 0 chr10 94289838 94290133 -51299155 - AluSp SINE Alu -17 296 1 21 36 0 0 chr10 94290140 94290168 -51299120 + AT_rich Low_complexity Low_complexity 1 28 0 360 0 0 0 chr10 94291473 94291513 -51297775 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 1203 195 18 0 chr10 94291549 94291770 -51297518 - AluJb SINE Alu -2 310 86 2403 70 6 13 chr10 94292037 94292214 -51297074 - AluSx SINE Alu 0 312 136 2075 130 0 7 chr10 94292214 94292513 -51296775 - AluSg SINE Alu -13 297 1 2403 70 6 13 chr10 94292513 94292649 -51296639 - AluSx SINE Alu -176 136 1 28 48 0 0 chr10 94292872 94292914 -51296374 + AT_rich Low_complexity Low_complexity 1 42 0 23 0 0 0 chr10 94293377 94293400 -51295888 + AT_rich Low_complexity Low_complexity 1 23 0 276 267 69 26 chr10 94294277 94294393 -51294895 + MIR SINE MIR 129 249 -13 475 105 47 0 chr10 94294433 94294519 -51294769 + CT-rich Low_complexity Low_complexity 3 92 0 1579 184 50 0 chr10 94294522 94294804 -51294484 - AluJb SINE Alu 0 312 17 661 243 78 23 chr10 94295025 94295243 -51294045 + Charlie8 DNA MER1_type 4 233 -2184 318 321 143 0 chr10 94295333 94295370 -51293918 + Charlie8 DNA MER1_type 368 398 -2019 2334 88 10 3 chr10 94295370 94295675 -51293613 - AluSq SINE Alu -6 307 1 318 321 143 0 chr10 94295675 94295902 -51293386 + Charlie8 DNA MER1_type 398 670 -1747 1728 154 20 23 chr10 94296118 94296423 -51292865 - AluJb SINE Alu -8 304 1 2245 72 3 7 chr10 94296701 94296992 -51292296 - AluY SINE Alu -17 294 5 433 157 15 3 chr10 94297809 94298007 -51291281 + AluJo SINE Alu 39 302 -10 567 192 67 8 chr10 94298235 94298355 -51290933 - FLAM_C SINE Alu -16 127 1 483 287 214 17 chr10 94298465 94299154 -51290134 - L1M4 LINE L1 -1112 5034 4191 1973 132 28 0 chr10 94299227 94299515 -51289773 - AluSx SINE Alu -16 296 1 370 145 58 0 chr10 94299526 94299595 -51289693 - MLT1B LTR MaLR -290 100 28 198 0 0 0 chr10 94299775 94299797 -51289491 + (T)n Simple_repeat Simple_repeat 1 22 0 887 240 104 56 chr10 94299827 94300202 -51289086 - MLT1C LTR MaLR -47 420 28 3250 240 57 51 chr10 94300214 94300360 -51288928 - L1MC4 LINE L1 -3 8039 7895 252 0 0 0 chr10 94300360 94300388 -51288900 + (CA)n Simple_repeat Simple_repeat 2 29 0 3250 240 57 51 chr10 94300388 94300439 -51288849 - L1MC4 LINE L1 -147 7895 7846 2332 102 0 0 chr10 94300439 94300743 -51288545 - AluY SINE Alu -7 304 1 3250 240 57 51 chr10 94300743 94301545 -51287743 - L1MC4 LINE L1 -196 7846 7027 1427 178 31 24 chr10 94301545 94301832 -51287456 - AluJb SINE Alu -23 289 1 3250 240 57 51 chr10 94301832 94302161 -51287127 - L1MC4 LINE L1 -1015 7027 6701 23 0 0 0 chr10 94302290 94302313 -51286975 + AT_rich Low_complexity Low_complexity 1 23 0 1777 190 0 16 chr10 94302355 94302665 -51286623 - AluJo SINE Alu -7 305 1 1779 139 0 0 chr10 94302753 94303004 -51286284 - AluSx SINE Alu -16 296 46 1269 224 53 13 chr10 94303005 94303461 -51285827 - L1M4 LINE L1 -2609 3537 3064 250 310 240 0 chr10 94303515 94303644 -51285644 + MIR SINE MIR 17 176 -86 805 126 0 7 chr10 94304134 94304269 -51285019 - L1MB4 LINE L1 -13 6167 6034 1957 152 0 14 chr10 94304280 94304576 -51284712 - AluJb SINE Alu -20 292 1 655 188 38 0 chr10 94304587 94304720 -51284568 - FLAM_C SINE Alu 0 143 6 2525 198 52 34 chr10 94304721 94304966 -51284322 - L1MB7 LINE L1 -140 6044 5805 2232 88 0 34 chr10 94304966 94305263 -51284025 - AluSx SINE Alu -25 287 1 2525 198 52 34 chr10 94305263 94305875 -51283413 - L1MB7 LINE L1 -379 5805 5171 558 146 0 0 chr10 94305900 94305982 -51283306 - AluSq/x SINE Alu -183 129 48 2058 148 0 0 chr10 94306010 94306321 -51282967 - AluSx SINE Alu -1 311 1 324 164 14 41 chr10 94306324 94306397 -51282891 - L1MB7 LINE L1 -976 5170 5100 749 214 98 65 chr10 94306397 94306795 -51282493 - L1MC5 LINE L1 -430 7531 7121 27 0 0 0 chr10 94306796 94306823 -51282465 + AT_rich Low_complexity Low_complexity 1 27 0 1132 207 0 9 chr10 94306823 94307036 -51282252 + AluJo SINE Alu 44 254 -58 925 233 125 15 chr10 94307071 94307536 -51281752 - L1MC4 LINE L1 -1659 6126 5616 786 200 72 118 chr10 94307572 94307617 -51281671 - L1MC5 LINE L1 -894 7067 7021 2118 151 28 28 chr10 94307617 94308041 -51281247 - L1MC1 LINE L1 0 6333 5910 786 200 72 118 chr10 94308041 94308451 -51280837 - L1MC5 LINE L1 -940 7021 6633 506 268 116 25 chr10 94308815 94309169 -51280119 - HAL1b LINE L1 -725 623 238 457 175 12 0 chr10 94309181 94309261 -51280027 - AluJ/FLAM SINE Alu -211 101 21 2227 115 3 0 chr10 94309761 94310065 -51279223 - AluSg SINE Alu -5 305 1 476 254 94 64 chr10 94310726 94311106 -51278182 + MLT1I LTR MaLR 1 392 -17 1057 150 139 8 chr10 94311106 94311373 -51277915 + MER33 DNA MER1_type 1 302 -22 512 305 78 67 chr10 94311416 94311878 -51277410 + HAL1 LINE L1 416 882 -1625 2525 150 22 27 chr10 94312057 94312545 -51276743 - L1MB3 LINE L1 -13 6170 5685 1579 196 37 25 chr10 94312546 94312954 -51276334 + L1 LINE L1 3341 3753 -2393 2182 112 0 0 chr10 94313012 94313299 -51275989 - AluSg SINE Alu -23 287 1 223 317 30 40 chr10 94313721 94313822 -51275466 + MIR SINE MIR 13 112 -150 320 234 32 89 chr10 94313839 94313963 -51275325 + L2 LINE L2 3192 3308 -5 227 261 22 65 chr10 94313967 94314059 -51275229 + MIR SINE MIR 151 238 -24 213 39 0 0 chr10 94314138 94314164 -51275124 + (TTA)n Simple_repeat Simple_repeat 2 27 0 2047 92 57 0 chr10 94314298 94314581 -51274707 - AluSg SINE Alu -11 299 1 1639 185 7 17 chr10 94315021 94315323 -51273965 - AluJb SINE Alu -11 301 3 664 233 101 13 chr10 94316137 94316336 -51272952 + MIR SINE MIR 27 238 -24 1673 130 13 82 chr10 94316795 94317110 -51272178 - AluJb SINE Alu -19 293 1 591 120 46 19 chr10 94317331 94317439 -51271849 - L1MB8 LINE L1 -6 6172 6062 866 233 0 125 chr10 94317470 94317609 -51271679 + MIR SINE MIR 4 88 -174 2244 99 26 0 chr10 94317609 94317911 -51271377 - AluSx SINE Alu -2 310 1 866 233 0 125 chr10 94317911 94318067 -51271221 + MIR SINE MIR 88 262 0 631 177 268 40 chr10 94318274 94318472 -51270816 - MIR SINE MIR 0 262 20 279 0 0 0 chr10 94319064 94319095 -51270193 + (TG)n Simple_repeat Simple_repeat 2 32 0 938 173 5 38 chr10 94320068 94320253 -51269035 - AluJb SINE Alu 0 312 134 219 36 0 0 chr10 94320452 94320480 -51268808 + (TG)n Simple_repeat Simple_repeat 1 28 0 1616 197 14 14 chr10 94320480 94320759 -51268529 - AluJb SINE Alu -33 279 1 555 245 71 59 chr10 94320974 94321296 -51267992 - L1MC4 LINE L1 -27 8015 7690 240 222 97 28 chr10 94321369 94321394 -51267894 - L1MC4 LINE L1 -364 7678 7656 270 0 0 0 chr10 94321394 94321424 -51267864 + (CA)n Simple_repeat Simple_repeat 2 31 0 240 222 97 28 chr10 94321424 94321470 -51267818 - L1MC4 LINE L1 -386 7656 7602 26 30 0 0 chr10 94321887 94321920 -51267368 + AT_rich Low_complexity Low_complexity 1 33 0 214 191 21 0 chr10 94321962 94322009 -51267279 + (TCTA)n Simple_repeat Simple_repeat 2 49 0 499 257 56 85 chr10 94322215 94322593 -51266695 - L1ME3A LINE L1 -221 5949 5583 2121 131 0 0 chr10 94322854 94323144 -51266144 + AluSg SINE Alu 1 290 -20 23 33 0 0 chr10 94323765 94323795 -51265493 + AT_rich Low_complexity Low_complexity 1 30 0 2647 201 107 49 chr10 94324316 94324899 -51264389 - L1MD1 LINE L1 -10 6232 5684 2359 150 48 25 chr10 94324899 94325373 -51263915 - MER31A LTR ERV1 0 485 1 2647 201 107 49 chr10 94325373 94325865 -51263423 - L1MD1 LINE L1 -558 5684 5098 1095 164 70 59 chr10 94325860 94326146 -51263142 - L1MB7 LINE L1 -171 6013 5725 * 1796 164 3 30 chr10 94326458 94326757 -51262531 + AluJo SINE Alu 3 293 -19 217 200 14 114 chr10 94326867 94326937 -51262351 - L2 LINE L2 -22 3291 3229 2268 106 0 3 chr10 94327168 94327469 -51261819 + AluSg SINE Alu 1 300 -10 1216 218 154 7 chr10 94327532 94327940 -51261348 - L1MB8 LINE L1 -116 6062 5595 1003 188 18 0 chr10 94327943 94328113 -51261175 + AluJb SINE Alu 131 303 -9 863 189 58 0 chr10 94328117 94328307 -51260981 - L1MB8 LINE L1 -596 5582 5382 232 333 29 20 chr10 94328677 94328779 -51260509 - L2 LINE L2 -1024 2290 2188 646 261 168 48 chr10 94328823 94329199 -51260089 - MLT1L LTR MaLR -49 566 146 983 140 0 0 chr10 94330103 94330246 -51259042 + AluJb SINE Alu 169 311 -1 2263 75 48 0 chr10 94330268 94330562 -51258726 + AluSg SINE Alu 3 310 0 233 54 54 0 chr10 94331422 94331459 -51257829 - L1PA8 LINE L1 -9 6163 6125 992 132 0 0 chr10 94331498 94331634 -51257654 + AluSq/x SINE Alu 1 136 -177 1852 183 0 0 chr10 94331635 94331935 -51257353 + AluJb SINE Alu 3 302 -10 354 23 0 0 chr10 94332214 94332257 -51257031 + (TG)n Simple_repeat Simple_repeat 2 44 0 751 87 0 0 chr10 94332260 94332352 -51256936 - AluS SINE Alu -221 92 2 691 112 0 0 chr10 94333127 94333216 -51256072 + AluSg/x SINE Alu 196 284 -25 2001 141 0 0 chr10 94334313 94334596 -51254692 + AluSx SINE Alu 21 303 -9 1723 130 70 32 chr10 94334659 94334944 -51254344 - AluJo SINE Alu -16 296 1 306 253 35 35 chr10 94336101 94336188 -51253100 - L2 LINE L2 -1 3312 3226 239 152 20 131 chr10 94336292 94336391 -51252897 + L1MA7 LINE L1 6201 6288 -3 233 289 44 22 chr10 94336462 94336552 -51252736 - L2 LINE L2 -213 3059 2968 2141 173 54 23 chr10 94336552 94337335 -51251953 + MER21B LTR ERV1 1 863 0 232 352 82 46 chr10 94337436 94337623 -51251665 - L2 LINE L2 -430 2884 2682 2301 131 39 28 chr10 94337623 94337982 -51251306 - THE1B LTR MaLR 0 364 2 232 352 82 46 chr10 94337982 94338075 -51251213 - L2 LINE L2 -632 2682 2594 193 282 103 13 chr10 94338593 94338671 -51250617 - L2 LINE L2 -211 3061 2977 202 326 41 0 chr10 94338822 94338920 -51250368 - L2 LINE L2 -660 2654 2553 194 0 39 0 chr10 94339752 94339778 -51249510 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 1914 102 4 0 chr10 94339778 94340024 -51249264 - AluSq SINE Alu -32 281 35 225 329 0 27 chr10 94340036 94340109 -51249179 + MIR SINE MIR 2 72 -190 808 288 88 18 chr10 94340109 94340449 -51248839 - LTR16C LTR ERVL -3 488 125 2549 55 0 0 chr10 94340701 94340992 -51248296 + AluY SINE Alu 4 294 -17 189 74 0 0 chr10 94340993 94341020 -51248268 + (TA)n Simple_repeat Simple_repeat 2 28 0 394 299 77 52 chr10 94341171 94341495 -51247793 - ERVL LTR ERVL -1479 4285 3954 1206 108 0 0 chr10 94341524 94341681 -51247607 + AluSg/x SINE Alu 122 278 -32 180 0 0 0 chr10 94341954 94341974 -51247314 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 1090 101 0 0 chr10 94341999 94342137 -51247151 - AluSq/x SINE Alu -174 138 1 22 35 0 0 chr10 94342521 94342550 -51246738 + AT_rich Low_complexity Low_complexity 1 29 0 631 118 0 0 chr10 94342551 94342636 -51246652 + AluJ/FLAM SINE Alu 2 86 -226 2019 136 0 3 chr10 94342918 94343213 -51246075 - AluSg SINE Alu -16 294 1 383 269 74 0 chr10 94343260 94343368 -51245920 + MIR SINE MIR 147 262 0 350 205 70 82 chr10 94343425 94343596 -51245692 - L1M4 LINE L1 -2860 3286 3118 304 387 110 16 chr10 94343778 94344142 -51245146 + L2 LINE L2 2424 2821 -493 281 353 70 15 chr10 94344237 94344438 -51244850 + L2 LINE L2 2872 3083 -189 236 256 13 64 chr10 94344590 94344668 -51244620 + MER3 DNA MER1_type 40 113 -96 * 396 229 67 38 chr10 94344620 94344725 -51244563 - MER3 DNA MER1_type -96 113 6 193 219 24 0 chr10 94344728 94344769 -51244519 + L2 LINE L2 3215 3256 -16 2321 95 3 0 chr10 94345021 94345315 -51243973 + AluSx SINE Alu 1 295 -17 182 238 396 10 chr10 94345403 94345504 -51243784 - MER5A DNA MER1_type -3 186 47 999 138 0 26 chr10 94345610 94345782 -51243506 - FRAM SINE Alu 0 168 1 21 36 0 0 chr10 94346300 94346328 -51242960 + AT_rich Low_complexity Low_complexity 1 28 0 219 283 131 20 chr10 94346410 94346509 -51242779 + L2 LINE L2 3199 3308 -5 829 195 67 0 chr10 94346929 94347078 -51242210 + AluJb SINE Alu 136 294 -18 256 307 156 13 chr10 94347121 94347352 -51241936 + L1 LINE L1 2690 2953 -3193 996 219 14 14 chr10 94347353 94347563 -51241725 + AluJb SINE Alu 86 295 -17 751 257 45 10 chr10 94347705 94347907 -51241381 - MIR SINE MIR -1 261 53 394 259 146 19 chr10 94347921 94348230 -51241058 + L1 LINE L1 3162 3509 -2637 8904 73 5 0 chr10 94348531 94349597 -51239691 - MER11C LTR ERVK 0 1071 1 1655 129 119 0 chr10 94349907 94350185 -51239103 - AluSx SINE Alu 0 312 2 233 297 70 8 chr10 94351453 94351581 -51237707 + L1 LINE L1 3582 3717 -2429 919 251 102 122 chr10 94351670 94352392 -51236896 - MER21B LTR ERV1 -150 713 6 1456 196 185 20 chr10 94352429 94352786 -51236502 - MLT1F1 LTR MaLR 0 567 152 730 147 0 52 chr10 94352791 94352927 -51236361 - FLAM_C SINE Alu -1 142 14 613 191 61 0 chr10 94352941 94353056 -51236232 - MLT1F1 LTR MaLR -445 122 1 4912 165 53 15 chr10 94353121 94354272 -51235016 + L1 LINE L1 3875 5020 -1126 880 113 0 45 chr10 94354319 94354452 -51234836 - FLAM_C SINE Alu -16 127 1 326 197 0 45 chr10 94354500 94354520 -51234768 - Tigger2 DNA MER2_type -2645 73 54 2161 94 39 0 chr10 94354520 94354806 -51234482 + AluSx SINE Alu 1 297 -15 326 197 0 45 chr10 94354806 94354851 -51234437 - Tigger2 DNA MER2_type -2664 54 11 386 255 87 25 chr10 94354865 94355026 -51234262 + L1ME3A LINE L1 5611 5781 -2027 478 212 30 10 chr10 94355045 94355144 -51234144 + FAM SINE Alu 68 168 -17 345 321 46 46 chr10 94355144 94355362 -51233926 + L1ME3A LINE L1 5746 5963 -207 2185 128 0 0 chr10 94355470 94355767 -51233521 + AluSx SINE Alu 1 297 -15 2549 53 0 0 chr10 94355824 94356123 -51233165 - AluY SINE Alu -12 299 1 1146 264 148 15 chr10 94356969 94357743 -51231545 - L2 LINE L2 -2 3311 2439 1989 140 14 0 chr10 94357961 94358254 -51231034 - AluSx SINE Alu -9 303 7 433 266 96 23 chr10 94358427 94358604 -51230684 - MLT1K LTR MaLR 0 588 399 22 0 0 0 chr10 94358820 94358842 -51230446 + AT_rich Low_complexity Low_complexity 1 22 0 7458 57 18 9 chr10 94359069 94360033 -51229255 + HERVH LTR ERV1 6742 7713 0 3027 42 2 187 chr10 94360033 94360583 -51228705 + LTR7 LTR ERV1 1 448 -2 248 281 89 30 chr10 94360702 94360837 -51228451 - MER20B DNA MER1_type -613 170 28 * 534 235 287 31 chr10 94360819 94361206 -51228082 - LTR50 LTR ERVL -275 520 35 239 244 43 113 chr10 94361341 94361379 -51227909 + MIR SINE MIR 67 106 -156 1824 116 4 8 chr10 94361379 94361646 -51227642 - AluSg SINE Alu 0 310 45 239 244 43 113 chr10 94361646 94361722 -51227566 + MIR SINE MIR 106 173 -89 232 290 173 42 chr10 94361776 94361945 -51227343 + MIR SINE MIR 20 208 -54 1275 142 91 18 chr10 94362131 94362350 -51226938 + MER46A DNA MER2_type 2 236 0 21 0 0 0 chr10 94364097 94364118 -51225170 + AT_rich Low_complexity Low_complexity 1 21 0 2212 110 3 3 chr10 94364157 94364457 -51224831 + AluSx SINE Alu 1 300 -12 2374 90 0 0 chr10 94364457 94364756 -51224532 + AluSp SINE Alu 1 299 -14 356 283 11 0 chr10 94364898 94364990 -51224298 - MIR SINE MIR -108 154 62 33 0 0 0 chr10 94364990 94365023 -51224265 + AT_rich Low_complexity Low_complexity 1 33 0 525 292 206 74 chr10 94365089 94365403 -51223885 + L2 LINE L2 2139 2410 -903 1759 157 7 7 chr10 94365403 94365705 -51223583 - AluJo SINE Alu 0 302 1 525 292 206 74 chr10 94365705 94366439 -51222849 + L2 LINE L2 2410 3313 0 184 319 0 0 chr10 94366463 94366510 -51222778 - L3b LINE CR1 -7 1576 1530 1828 138 38 7 chr10 94366511 94366801 -51222487 + AluJo SINE Alu 1 299 -13 186 194 0 0 chr10 94367254 94367290 -51221998 - L2 LINE L2 -15 3298 3263 21 0 0 0 chr10 94367317 94367338 -51221950 + AT_rich Low_complexity Low_complexity 1 21 0 720 226 77 28 chr10 94367348 94367596 -51221692 + MIR SINE MIR 3 262 0 54 0 0 0 chr10 94367614 94367668 -51221620 + AT_rich Low_complexity Low_complexity 1 54 0 259 216 39 88 chr10 94367676 94367730 -51221558 - MIR SINE MIR -64 198 150 670 243 35 12 chr10 94367730 94367899 -51221389 - FAM SINE Alu -2 173 1 259 216 39 88 chr10 94367899 94367946 -51221342 - MIR SINE MIR -112 150 102 205 343 67 45 chr10 94368178 94368285 -51221003 + L2 LINE L2 3136 3248 -24 742 128 0 107 chr10 94368285 94368434 -51220854 + FLAM_C SINE Alu 1 133 0 205 343 67 45 chr10 94368434 94368460 -51220828 + L2 LINE L2 3248 3272 0 180 77 0 0 chr10 94369369 94369395 -51219893 + (TCCCC)n Simple_repeat Simple_repeat 3 28 0 2185 110 0 7 chr10 94369397 94369689 -51219599 - AluY SINE Alu -21 290 1 2379 84 0 37 chr10 94369689 94370012 -51219276 - AluSx SINE Alu -1 311 1 2169 107 4 0 chr10 94370074 94370380 -51218908 + AluSx SINE Alu 2 308 0 244 315 54 11 chr10 94370562 94370654 -51218634 - MIR3 SINE MIR -5 203 108 278 258 82 21 chr10 94371265 94371362 -51217926 + MIR SINE MIR 106 208 -54 1902 95 45 8 chr10 94371483 94371747 -51217541 + AluSg SINE Alu 1 274 -36 2546 66 0 0 chr10 94372183 94372488 -51216800 - AluY SINE Alu -6 305 1 209 234 21 0 chr10 94373180 94373227 -51216061 + MIR SINE MIR 106 153 -109 226 320 0 13 chr10 94373828 94373903 -51215385 - MLT1L LTR MaLR -536 79 6 23 0 0 0 chr10 94373947 94373970 -51215318 + AT_rich Low_complexity Low_complexity 1 23 0 525 264 164 73 chr10 94374015 94374454 -51214834 - MLT1L LTR MaLR -47 568 90 361 263 40 33 chr10 94375413 94375565 -51213723 + L2 LINE L2 3161 3313 0 1412 171 191 161 chr10 94375620 94375900 -51213388 + L1MC5 LINE L1 6656 6926 -1035 1314 129 47 168 chr10 94375900 94376240 -51213048 + AluJb SINE Alu 1 299 -3 1412 171 191 161 chr10 94376240 94376518 -51212770 + L1MC5 LINE L1 6926 7194 -767 408 163 13 22 chr10 94376518 94376607 -51212681 - MER3 DNA MER1_type -100 109 31 1412 171 191 161 chr10 94376607 94377166 -51212122 + L1MC5 LINE L1 7194 7898 -63 1757 93 0 0 chr10 94377192 94377417 -51211871 + AluSg/x SINE Alu 71 295 -17 243 288 0 0 chr10 94377446 94377526 -51211762 + L1ME4a LINE L1 5946 6025 -96 2146 84 10 24 chr10 94377666 94377964 -51211324 + AluSq SINE Alu 8 301 -12 459 248 16 16 chr10 94377995 94378120 -51211168 - L1MC5 LINE L1 -53 7908 7784 696 132 0 0 chr10 94378189 94378280 -51211008 + AluSx SINE Alu 2 92 -220 2435 33 0 0 chr10 94378280 94378552 -51210736 + AluY SINE Alu 31 302 -9 1639 107 4 0 chr10 94378552 94378776 -51210512 + AluSx SINE Alu 80 305 -5 2071 112 27 0 chr10 94378853 94379148 -51210140 - AluSx SINE Alu -9 303 1 1171 164 5 19 chr10 94379151 94379365 -51209923 - AluJo SINE Alu -100 212 2 2208 115 3 6 chr10 94379384 94379697 -51209591 - AluSx SINE Alu 0 312 1 1319 212 44 11 chr10 94380119 94380393 -51208895 + MER58B DNA MER1_type 10 292 -49 916 180 18 0 chr10 94380403 94380570 -51208718 + MER3 DNA MER1_type 40 209 0 774 289 140 10 chr10 94381110 94381518 -51207770 - L2 LINE L2 -367 2947 2487 2257 89 7 10 chr10 94381811 94382114 -51207174 - AluSq SINE Alu -11 302 1 195 333 41 34 chr10 94382141 94382288 -51207000 + L2 LINE L2 3158 3305 -8 238 204 133 71 chr10 94382469 94382582 -51206706 - MIR SINE MIR -49 213 94 319 286 53 64 chr10 94382757 94382928 -51206360 - MIR3 SINE MIR -13 195 27 2193 105 0 14 chr10 94383163 94383458 -51205830 + AluSx SINE Alu 1 291 -21 2031 156 0 0 chr10 94383526 94383827 -51205461 + AluJo SINE Alu 1 301 -11 1297 60 6 12 chr10 94384550 94384716 -51204572 + U1 snRNA snRNA 1 165 0 35 24 0 0 chr10 94384716 94384758 -51204530 + AT_rich Low_complexity Low_complexity 1 42 0 849 137 0 23 chr10 94385584 94385715 -51203573 - FLAM_C SINE Alu -5 128 1 225 65 0 0 chr10 94387075 94387106 -51202182 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 1733 158 53 0 chr10 94387424 94387709 -51201579 - AluJb SINE Alu -12 300 1 907 129 0 0 chr10 94387731 94387863 -51201425 + AluJb SINE Alu 170 301 -11 21 0 0 0 chr10 94387970 94387991 -51201297 + AT_rich Low_complexity Low_complexity 1 21 0 276 148 98 0 chr10 94388170 94388231 -51201057 + L1MCa LINE L1 2179 2245 -4181 2561 60 3 0 chr10 94388489 94388790 -51200498 + AluY SINE Alu 1 302 -9 206 254 30 45 chr10 94388791 94388858 -51200430 - L3 LINE CR1 -15 1562 1497 337 318 220 8 chr10 94388883 94389279 -51200009 - L3 LINE CR1 -251 1326 847 278 106 0 21 chr10 94389279 94389326 -51199962 - Charlie2 DNA MER1_type -756 2106 2061 342 207 73 0 chr10 94389684 94389766 -51199522 + MIR SINE MIR 169 256 -6 556 251 40 40 chr10 94389790 94390013 -51199275 + Charlie2 DNA MER1_type 2 224 -2558 867 212 128 60 chr10 94390101 94390242 -51199046 + Charlie2 DNA MER1_type 1897 2027 -835 2094 124 3 0 chr10 94390242 94390532 -51198756 + AluSp SINE Alu 6 296 -17 867 212 128 60 chr10 94390532 94390725 -51198563 + Charlie2 DNA MER1_type 2027 2254 -608 954 173 209 16 chr10 94390727 94390853 -51198435 + AluSg1 SINE Alu 1 101 -208 2519 87 0 0 chr10 94390853 94391163 -51198125 + AluSx SINE Alu 1 310 -2 954 173 209 16 chr10 94391163 94391290 -51197998 + AluSg1 SINE Alu 101 303 -6 1396 193 136 55 chr10 94391295 94391839 -51197449 + Charlie2 DNA MER1_type 2256 2843 -19 332 330 82 43 chr10 94392510 94392598 -51196690 - MIR SINE MIR -13 249 166 1789 174 3 0 chr10 94392598 94392885 -51196403 - AluJo SINE Alu -22 290 3 332 330 82 43 chr10 94392885 94393029 -51196259 - MIR SINE MIR -96 166 8 595 147 0 69 chr10 94393052 94393168 -51196120 - FLAM_A SINE Alu -2 140 33 205 151 38 0 chr10 94393220 94393273 -51196015 + (TA)n Simple_repeat Simple_repeat 2 56 0 25 83 0 0 chr10 94393860 94393920 -51195368 + AT_rich Low_complexity Low_complexity 1 60 0 276 356 62 6 chr10 94395680 94395840 -51193448 - HAL1 LINE L1 -1963 544 376 2022 224 96 10 chr10 94395853 94396345 -51192943 + MLT1F LTR MaLR 1 534 -8 694 325 77 9 chr10 94396365 94396703 -51192585 - HAL1 LINE L1 -2146 361 1 265 221 65 0 chr10 94396706 94396783 -51192505 - L1MC/D LINE L1 -2322 5486 5405 1989 119 22 4 chr10 94396844 94397141 -51192147 - AluSx SINE Alu 0 302 1 714 289 42 5 chr10 94397447 94397637 -51191651 + HAL1 LINE L1 608 804 -1703 400 278 33 20 chr10 94397642 94397793 -51191495 + L1MEc LINE L1 148 300 -6096 3170 253 96 31 chr10 94397794 94398583 -51190705 + L1MEc LINE L1 446 1182 -5214 2290 65 18 0 chr10 94398583 94398887 -51190401 - AluY SINE Alu 0 309 1 2172 126 0 0 chr10 94398892 94399185 -51190103 - AluSx SINE Alu -19 293 1 3170 253 96 31 chr10 94399185 94399655 -51189633 + L1MEc LINE L1 1185 1795 -4601 1169 263 90 61 chr10 94400863 94401419 -51187869 - L1MCa LINE L1 -4528 2594 2055 2633 36 0 16 chr10 94401419 94401726 -51187562 + AluY SINE Alu 1 302 -9 1169 263 90 61 chr10 94401726 94402222 -51187066 - L1MCa LINE L1 -5067 2055 1308 3972 146 44 29 chr10 94402241 94402967 -51186321 + L1MA4 LINE L1 5433 6169 -131 1319 152 0 5 chr10 94402969 94403167 -51186121 + AluJb SINE Alu 86 282 -30 786 116 7 65 chr10 94403170 94403325 -51185963 + L1MA4 LINE L1 6155 6300 0 847 272 41 32 chr10 94403326 94403664 -51185624 - L1MCa LINE L1 -5138 1285 945 761 280 31 49 chr10 94403992 94404274 -51185014 + HAL1 LINE L1 2062 2335 -172 1824 168 23 3 chr10 94404274 94404578 -51184710 + AluSx SINE Alu 1 310 -2 761 280 31 49 chr10 94404578 94404748 -51184540 + HAL1 LINE L1 2335 2506 -1 303 249 133 48 chr10 94404975 94405014 -51184274 + L1MC4a LINE L1 5720 5754 -2054 2234 118 0 16 chr10 94405014 94405329 -51183959 + AluSx SINE Alu 1 310 -2 303 249 133 48 chr10 94405329 94405454 -51183834 + L1MC4a LINE L1 5754 5898 -1910 22 35 0 0 chr10 94405637 94405666 -51183622 + AT_rich Low_complexity Low_complexity 1 29 0 456 160 0 13 chr10 94405788 94405863 -51183425 + AluJb SINE Alu 2 75 -237 1697 136 0 0 chr10 94405905 94406140 -51183148 + AluJb SINE Alu 70 304 -8 251 215 0 65 chr10 94406333 94406426 -51182862 + L1MC/D LINE L1 5257 5343 -821 1910 146 3 14 chr10 94406431 94406719 -51182569 + AluJb SINE Alu 4 288 -24 312 296 106 0 chr10 94406731 94406873 -51182415 + L1MC/D LINE L1 5328 5484 -2324 276 30 0 0 chr10 94408067 94408100 -51181188 + (TTTTA)n Simple_repeat Simple_repeat 1 33 0 1551 157 15 25 chr10 94408113 94408387 -51180901 - AluSx SINE Alu -37 275 5 3976 201 65 23 chr10 94408436 94410088 -51179200 + L1ME1 LINE L1 4177 5903 -263 1666 63 5 24 chr10 94410089 94410294 -51178994 - AluSx SINE Alu -111 201 1 436 203 75 30 chr10 94410301 94410434 -51178854 + L1ME1 LINE L1 6022 6160 -6 1799 126 8 0 chr10 94410453 94410707 -51178581 + AluSx SINE Alu 44 299 -13 385 131 117 0 chr10 94411236 94411317 -51177971 - MLT1G LTR MaLR -15 575 448 2241 101 0 13 chr10 94411670 94411968 -51177320 + AluSx SINE Alu 1 294 -18 1595 234 52 11 chr10 94412840 94413284 -51176004 - MLT1C LTR MaLR 0 467 6 2137 119 23 0 chr10 94413576 94413879 -51175409 - AluSx SINE Alu -1 311 2 432 314 40 55 chr10 94414626 94414659 -51174629 - L1MC4a LINE L1 -1902 5906 5874 1775 160 45 0 chr10 94414659 94414946 -51174342 - AluJo SINE Alu 0 312 13 432 314 40 55 chr10 94414946 94415313 -51173975 - L1MC4a LINE L1 -1934 5874 5512 2094 143 7 0 chr10 94415810 94416117 -51173171 - AluSx SINE Alu -3 309 1 637 229 75 53 chr10 94416162 94416389 -51172899 + MER46C DNA MER2_type 81 312 -26 3938 124 41 6 chr10 94416740 94417399 -51171889 - L1MA2 LINE L1 0 6304 5623 1950 217 88 34 chr10 94417430 94417955 -51171333 - MER68 LTR ERV1 -8 554 2 1923 138 28 7 chr10 94421435 94421726 -51167562 - AluJo SINE Alu -15 297 1 2509 76 0 7 chr10 94423993 94424296 -51164992 + AluY SINE Alu 1 301 -10 696 246 16 3 chr10 94424584 94424798 -51164490 + MIR SINE MIR 38 255 -7 2209 99 10 3 chr10 94425305 94425598 -51163690 + AluSq SINE Alu 1 295 -18 813 156 159 78 chr10 94425621 94425783 -51163505 + MER33 DNA MER1_type 1 193 -2392 2150 80 3 10 chr10 94425783 94426071 -51163217 - AluY SINE Alu -25 286 1 813 156 159 78 chr10 94426071 94426165 -51163123 + MER33 DNA MER1_type 193 278 -46 412 305 72 0 chr10 94426209 94426376 -51162912 - MIR SINE MIR -48 214 36 23 0 0 0 chr10 94427011 94427034 -51162254 + GC_rich Low_complexity Low_complexity 1 23 0 26 74 0 0 chr10 94427045 94427099 -51162189 + GC_rich Low_complexity Low_complexity 1 54 0 21 0 0 0 chr10 94427401 94427422 -51161866 + GC_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr10 94427469 94427497 -51161791 + GC_rich Low_complexity Low_complexity 1 28 0 1930 117 25 0 chr10 94428268 94428542 -51160746 - AluSx SINE Alu -31 281 1 243 284 14 0 chr10 94429660 94429734 -51159554 - MER103 DNA DNA -80 86 12 351 222 44 11 chr10 94431505 94431595 -51157693 - MIR SINE MIR -120 142 50 182 267 0 0 chr10 94431654 94431714 -51157574 + L2 LINE L2 3005 3064 -208 384 285 182 0 chr10 94433490 94433655 -51155633 - MIR SINE MIR -14 248 54 294 376 55 5 chr10 94433784 94433834 -51155454 - MIR SINE MIR 0 262 216 2110 84 37 27 chr10 94433834 94433968 -51155320 + AluSp SINE Alu 1 132 -181 2488 62 3 13 chr10 94433968 94434272 -51155016 + AluY SINE Alu 1 301 -10 2110 84 37 27 chr10 94434272 94434434 -51154854 + AluSp SINE Alu 132 300 -13 294 376 55 5 chr10 94434434 94434585 -51154703 - MIR SINE MIR -46 216 51 404 244 114 119 chr10 94434600 94434703 -51154585 - MER5A DNA MER1_type -6 183 80 2291 98 0 9 chr10 94434703 94435018 -51154270 - AluSx SINE Alu 0 312 1 404 244 114 119 chr10 94435018 94435090 -51154198 - MER5A DNA MER1_type -109 80 9 410 88 15 0 chr10 94439581 94439649 -51149639 + (GA)n Simple_repeat Simple_repeat 2 70 0 2599 137 22 28 chr10 94440536 94440995 -51148293 + L1MD1 LINE L1 5786 6241 -1 2460 87 0 0 chr10 94440998 94441308 -51147980 + AluSg SINE Alu 1 310 0 2344 85 3 0 chr10 94441329 94441634 -51147654 + AluSx SINE Alu 1 306 -6 330 305 17 17 chr10 94441905 94442023 -51147265 - MIR3 SINE MIR -49 159 42 202 189 19 38 chr10 94442345 94442398 -51146890 + GA-rich Low_complexity Low_complexity 5 56 0 199 274 20 0 chr10 94447638 94447689 -51141599 + L2 LINE L2 3262 3313 0 453 305 33 7 chr10 94447887 94448038 -51141250 - MIR3 SINE MIR -50 158 4 223 170 0 21 chr10 94449872 94449919 -51139369 + G-rich Low_complexity Low_complexity 5 50 0 306 50 0 0 chr10 94450745 94450785 -51138503 + (CA)n Simple_repeat Simple_repeat 2 41 0 305 281 0 0 chr10 94450792 94450881 -51138407 + GA-rich Low_complexity Low_complexity 1 89 0 1671 172 36 7 chr10 94451999 94452302 -51136986 - AluJb SINE Alu 0 312 1 448 324 50 16 chr10 94454811 94454993 -51134295 + MIR SINE MIR 32 219 -43 606 219 48 7 chr10 94455384 94455530 -51133758 + MIR SINE MIR 34 185 -77 277 313 36 9 chr10 94456062 94456174 -51133114 - MIR SINE MIR -33 229 115 342 246 46 18 chr10 94456687 94456821 -51132467 + MIR SINE MIR 1 142 -66 512 306 79 0 chr10 94459600 94459816 -51129472 + MLT1J2 LTR MaLR 16 248 -202 232 200 100 0 chr10 94459839 94459899 -51129389 + MLT1I LTR MaLR 305 370 -39 1463 192 11 14 chr10 94459899 94460185 -51129103 + AluJo SINE Alu 5 289 -23 2300 91 0 0 chr10 94460198 94460494 -51128794 + AluSg SINE Alu 2 297 -13 1822 115 53 49 chr10 94460498 94460802 -51128486 + AluSx SINE Alu 1 305 -7 2220 121 0 6 chr10 94462240 94462554 -51126734 - AluSx SINE Alu 0 312 1 325 301 32 81 chr10 94462980 94463166 -51126122 - L1MC4 LINE L1 -1 8041 7865 187 323 81 20 chr10 94464496 94464595 -51124693 + MIR SINE MIR 92 196 -66 306 252 39 29 chr10 94466680 94466695 -51122593 - MIR SINE MIR -96 166 153 2067 110 7 0 chr10 94466695 94467004 -51122284 - AluSx SINE Alu 0 311 1 306 252 39 29 chr10 94467004 94467090 -51122198 - MIR SINE MIR -109 153 63 218 283 158 17 chr10 94468114 94468234 -51121054 - L3b LINE CR1 -115 1468 1332 258 32 0 0 chr10 94469767 94469798 -51119490 + (CCTG)n Simple_repeat Simple_repeat 1 31 0 269 277 89 40 chr10 94470867 94470968 -51118320 - MIR SINE MIR -78 130 24 216 254 0 17 chr10 94471645 94471704 -51117584 - MIR SINE MIR -146 116 59 340 328 9 9 chr10 94475849 94475965 -51113323 - MIR SINE MIR -69 139 24 193 300 157 21 chr10 94476103 94476243 -51113045 + MIR3 SINE MIR 3 161 -47 2019 102 46 3 chr10 94477707 94477990 -51111298 - AluSx SINE Alu -17 295 1 246 313 111 7 chr10 94481429 94481573 -51107715 - MIR SINE MIR -35 227 69 318 322 69 21 chr10 94481591 94481783 -51107505 - MIR SINE MIR -59 203 1 2270 101 3 3 chr10 94481866 94482172 -51107116 - AluSx SINE Alu -6 306 1 263 320 67 24 chr10 94482710 94482880 -51106408 - MIR SINE MIR -64 198 24 181 200 22 22 chr10 94483758 94483803 -51105485 - MIR SINE MIR -88 120 76 261 57 0 0 chr10 94484421 94484456 -51104832 + (TG)n Simple_repeat Simple_repeat 2 36 0 246 148 0 0 chr10 94484527 94484581 -51104707 + (TG)n Simple_repeat Simple_repeat 2 55 0 234 143 0 0 chr10 94484668 94484717 -51104571 + (TG)n Simple_repeat Simple_repeat 2 50 0 246 81 0 0 chr10 94484749 94484786 -51104502 + (TG)n Simple_repeat Simple_repeat 2 38 0 180 125 0 0 chr10 94484814 94484846 -51104442 + (TG)n Simple_repeat Simple_repeat 2 33 0 336 172 0 0 chr10 94484881 94484968 -51104320 + (TG)n Simple_repeat Simple_repeat 2 88 0 2346 101 7 0 chr10 94485318 94485624 -51103664 - AluSx SINE Alu -3 309 2 181 268 18 0 chr10 94488038 94488094 -51101194 + L2 LINE L2 3224 3280 -33 288 282 64 9 chr10 94488539 94488649 -51100639 - LTR33A LTR ERVL -378 145 30 198 0 0 0 chr10 94489439 94489461 -51099827 + (CAGCC)n Simple_repeat Simple_repeat 3 24 0 2348 116 3 0 chr10 94491110 94491421 -51097867 + AluSx SINE Alu 1 312 0 254 305 42 36 chr10 94491532 94491699 -51097589 + MIR SINE MIR 47 214 -48 416 196 18 107 chr10 94491812 94491924 -51097364 - MER5B DNA MER1_type -31 147 46 1162 251 35 12 chr10 94492287 94492629 -51096659 + Charlie4a DNA MER1_type 84 433 -75 2212 113 3 3 chr10 94492633 94492935 -51096353 + AluSx SINE Alu 1 302 -10 1725 172 28 28 chr10 94492947 94493237 -51096051 + AluJb SINE Alu 1 290 -22 22 0 0 0 chr10 94493238 94493260 -51096028 + AT_rich Low_complexity Low_complexity 1 22 0 342 209 15 0 chr10 94493267 94493334 -51095954 + Charlie4a DNA MER1_type 436 503 -5 1699 218 62 49 chr10 94494396 94494974 -51094314 + LTR24B LTR ERV1 1 635 0 948 256 30 58 chr10 94494974 94495355 -51093933 + LTR24B-int LTR ERV1 1 508 -4615 1784 164 3 10 chr10 94495355 94495647 -51093641 + AluSx SINE Alu 1 290 -22 948 256 30 58 chr10 94495647 94495787 -51093501 + LTR24B-int LTR ERV1 508 650 -4473 373 326 94 41 chr10 94495853 94496098 -51093190 + MER89-int LTR ERV1 402 659 -6099 1896 153 0 0 chr10 94496140 94496428 -51092860 + AluSg SINE Alu 1 288 -22 31 0 0 0 chr10 94496429 94496460 -51092828 + AT_rich Low_complexity Low_complexity 1 31 0 295 279 0 0 chr10 94496478 94496557 -51092731 + MER89-int LTR ERV1 667 745 -4378 240 319 0 30 chr10 94496871 94497006 -51092282 + CT-rich Low_complexity Low_complexity 2 132 0 23 33 0 0 chr10 94497729 94497759 -51091529 + AT_rich Low_complexity Low_complexity 1 30 0 1747 188 0 3 chr10 94497825 94498118 -51091170 - AluJb SINE Alu -20 292 1 321 289 0 39 chr10 94498189 94498317 -51090971 + MER89-int LTR ERV1 3308 3430 -4326 1918 171 13 0 chr10 94498894 94499192 -51090096 + AluJb SINE Alu 4 305 -7 303 271 64 49 chr10 94499193 94499396 -51089892 + MER89-int LTR ERV1 3844 4049 -4377 304 338 14 14 chr10 94499863 94500002 -51089286 + MER89-int LTR ERV1 4079 4217 -3175 250 217 0 17 chr10 94500636 94500696 -51088592 + MER89-int LTR ERV1 5751 5809 -1282 2094 154 0 0 chr10 94500715 94501026 -51088262 + AluJo SINE Alu 1 311 -1 266 209 58 35 chr10 94501376 94501462 -51087826 + MER89-int LTR ERV1 4993 5080 -1721 718 339 29 9 chr10 94501559 94501956 -51087332 + MER89-int LTR ERV1 6282 7298 -447 1045 248 74 60 chr10 94502451 94502481 -51086807 + LTR24B LTR ERV1 2 30 -546 2089 117 0 0 chr10 94502481 94502787 -51086501 + AluSx SINE Alu 1 306 0 1045 248 74 60 chr10 94502787 94503332 -51085956 + LTR24B LTR ERV1 30 543 -33 669 229 0 0 chr10 94503332 94503450 -51085838 + FLAM_C SINE Alu 2 119 -24 1571 176 81 3 chr10 94503469 94503753 -51085535 - AluSp SINE Alu -6 307 2 314 27 0 0 chr10 94503759 94503796 -51085492 + LTR24B LTR ERV1 533 569 -7 235 200 31 0 chr10 94503802 94503867 -51085421 - HAL1 LINE L1 -123 2384 2318 4330 166 75 11 chr10 94504061 94504860 -51084428 + MER21B LTR ERV1 2 851 -12 22 35 0 0 chr10 94507999 94508028 -51081260 + AT_rich Low_complexity Low_complexity 1 29 0 255 269 28 19 chr10 94508036 94508144 -51081144 + L1M4 LINE L1 4747 4855 -1291 510 258 54 75 chr10 94508302 94508597 -51080691 + L1ME LINE L1 376 664 -5541 1275 162 4 36 chr10 94509004 94509257 -51080031 + L1MA8 LINE L1 5987 6231 -60 225 126 42 32 chr10 94509662 94509757 -51079531 + (CCCA)n Simple_repeat Simple_repeat 4 99 0 1490 190 0 52 chr10 94509865 94510022 -51079266 - AluJb SINE Alu -22 290 155 2263 112 0 7 chr10 94510022 94510318 -51078970 - AluSg SINE Alu -16 294 1 1490 190 0 52 chr10 94510318 94510465 -51078823 - AluJb SINE Alu -157 155 2 797 269 42 73 chr10 94510617 94511160 -51078128 + L1ME LINE L1 660 1181 -5215 2207 105 10 16 chr10 94511160 94511464 -51077824 + AluSx SINE Alu 1 302 -10 797 269 42 73 chr10 94511464 94511581 -51077707 + L1ME LINE L1 1181 1300 -5096 662 257 76 49 chr10 94511613 94511707 -51077581 + L1ME LINE L1 1941 2031 -4184 2010 156 0 13 chr10 94511707 94512022 -51077266 + AluSx SINE Alu 2 312 0 662 257 76 49 chr10 94512022 94512563 -51076725 + L1ME LINE L1 2031 2564 -3651 23 0 0 0 chr10 94512563 94512586 -51076702 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr10 94512604 94512627 -51076661 + AT_rich Low_complexity Low_complexity 1 23 0 242 296 51 0 chr10 94513178 94513276 -51076012 - MER103 DNA DNA -16 150 48 386 172 0 0 chr10 94513299 94513363 -51075925 + L1MA8 LINE L1 6168 6231 -60 252 92 94 31 chr10 94513387 94513461 -51075827 + L1MA8 LINE L1 6216 6281 -10 2119 133 0 28 chr10 94513609 94513926 -51075362 + AluSx SINE Alu 1 308 -4 1552 136 31 21 chr10 94514614 94514709 -51074579 - L1MB4 LINE L1 0 6180 6087 2149 71 0 0 chr10 94514709 94514975 -51074313 + AluY SINE Alu 38 303 -8 1552 136 31 21 chr10 94514975 94515166 -51074122 - L1MB4 LINE L1 -93 6087 5891 3469 204 37 39 chr10 94515175 94515387 -51073901 - L1M4 LINE L1 -2964 3418 3207 1799 162 13 13 chr10 94515387 94515689 -51073599 - AluSx SINE Alu -10 302 1 3469 204 37 39 chr10 94515689 94516014 -51073274 - L1M4 LINE L1 -3175 3207 2883 1878 209 19 3 chr10 94516014 94516373 -51072915 - MLT1A1 LTR MaLR 0 365 1 3469 204 37 39 chr10 94516373 94516461 -51072827 - L1M4 LINE L1 -3499 2883 2796 2305 100 10 0 chr10 94516461 94516760 -51072528 - AluSp SINE Alu -11 302 1 3469 204 37 39 chr10 94516760 94517341 -51071947 - L1M4 LINE L1 -3586 2796 2112 1980 65 58 7 chr10 94517341 94517617 -51071671 - L1PA10 LINE L1 0 6168 5879 3469 204 37 39 chr10 94517617 94517996 -51071292 - L1M4 LINE L1 -4270 2112 1734 240 213 37 125 chr10 94517995 94518131 -51071157 - MLT1A1-int LTR MaLR -203 1168 1045 * 2240 122 3 0 chr10 94518382 94518678 -51070610 + AluSx SINE Alu 3 299 -13 1976 142 3 3 chr10 94518782 94519088 -51070200 - AluSx SINE Alu 0 307 2 1965 140 16 44 chr10 94519094 94519443 -51069845 - AluJb SINE Alu 0 340 1 1626 139 262 17 chr10 94519521 94519645 -51069643 + MSTA LTR MaLR 1 93 -335 14994 30 5 0 chr10 94519645 94522198 -51067090 + L1PA4 LINE L1 3634 6155 0 1626 139 262 17 chr10 94522198 94522417 -51066871 + MSTA LTR MaLR 93 428 0 2287 172 0 15 chr10 94522426 94522607 -51066681 + MLT1B LTR MaLR 1 183 -207 2175 120 20 0 chr10 94522607 94522907 -51066381 + AluSg SINE Alu 1 306 -4 2287 172 0 15 chr10 94522907 94523121 -51066167 + MLT1B LTR MaLR 183 390 0 1831 65 0 0 chr10 94523335 94523552 -51065736 + AluY SINE Alu 89 305 -6 1005 301 22 35 chr10 94523893 94524295 -51064993 - MLT1I LTR MaLR 0 409 13 528 319 93 30 chr10 94524443 94524807 -51064481 + ERVL LTR ERVL 1891 2277 -3487 2024 104 9 38 chr10 94525316 94525633 -51063655 + AluSx SINE Alu 1 308 -4 2202 114 3 7 chr10 94526180 94526478 -51062810 + AluSx SINE Alu 1 297 -15 313 255 11 21 chr10 94526577 94526671 -51062617 + L1MC5 LINE L1 7807 7899 -62 5614 61 70 6 chr10 94526852 94527585 -51061703 - LTR17 LTR ERV1 0 780 1 209 400 10 0 chr10 94527586 94527686 -51061602 - MIR SINE MIR -160 102 2 1990 142 6 28 chr10 94527880 94528019 -51061269 + AluJo SINE Alu 1 142 -170 1985 139 17 3 chr10 94528019 94528314 -51060974 + AluSx SINE Alu 1 299 -13 1990 142 6 28 chr10 94528314 94528492 -51060796 + AluJo SINE Alu 142 311 -1 779 264 52 73 chr10 94528571 94528900 -51060388 - MLT1I LTR MaLR 0 409 88 376 262 139 60 chr10 94529460 94529792 -51059496 - L1ME4a LINE L1 -11 6110 5753 2021 166 0 0 chr10 94530164 94530471 -51058817 + AluSx SINE Alu 1 307 -5 1283 289 98 58 chr10 94530908 94531637 -51057651 + L1MEd LINE L1 521 1219 -5091 1697 182 3 36 chr10 94531637 94531945 -51057343 - AluJo SINE Alu -14 298 1 1283 289 98 58 chr10 94531945 94532207 -51057081 + L1MEd LINE L1 1219 1469 -4841 2108 125 7 0 chr10 94532207 94532495 -51056793 + AluSx SINE Alu 1 290 -22 1861 163 0 27 chr10 94532500 94532801 -51056487 - AluJb SINE Alu -19 293 1 1283 289 98 58 chr10 94532801 94533040 -51056248 + L1MEd LINE L1 1472 1700 -4610 2585 50 0 13 chr10 94533040 94533343 -51055945 + AluY SINE Alu 2 300 -11 1283 289 98 58 chr10 94533343 94533856 -51055432 + L1MEd LINE L1 1700 2360 -3950 1169 247 190 14 chr10 94533856 94534094 -51055194 + MLT1G LTR MaLR 1 196 -428 2513 61 0 0 chr10 94534094 94534391 -51054897 + AluY SINE Alu 1 297 -14 1169 247 190 14 chr10 94534391 94534681 -51054607 + MLT1G LTR MaLR 196 622 -2 1362 254 60 23 chr10 94534681 94535212 -51054076 + L1MEd LINE L1 2319 2869 -3260 444 279 98 11 chr10 94535229 94535412 -51053876 - LTR16C LTR ERVL -2 489 291 2155 120 7 0 chr10 94535418 94535709 -51053579 - AluSx SINE Alu -16 296 4 1231 163 19 130 chr10 94536004 94536263 -51053025 - MER58B DNA MER1_type -2094 326 117 4278 137 28 0 chr10 94536263 94536971 -51052317 - L1MC1 LINE L1 -5 6328 5601 1231 163 19 130 chr10 94536971 94537072 -51052216 - MER58B DNA MER1_type -2303 117 6 843 201 15 20 chr10 94537242 94537441 -51051847 + LTR33 LTR ERVL 324 521 0 1154 102 134 0 chr10 94537636 94537823 -51051465 + MSTC LTR MaLR 1 212 -216 2151 136 7 3 chr10 94537824 94538133 -51051155 + AluSq SINE Alu 3 312 -1 590 161 9 0 chr10 94538138 94538250 -51051038 + GA-rich Low_complexity Low_complexity 4 116 0 349 154 13 103 chr10 94538252 94538330 -51050958 + MSTC LTR MaLR 198 268 -160 540 126 0 0 chr10 94538330 94538417 -51050871 + L1MC1 LINE L1 5800 5886 -447 579 152 9 0 chr10 94538417 94538522 -51050766 + MSTC LTR MaLR 323 428 0 2006 157 12 3 chr10 94539283 94539621 -51049667 - MER61A LTR ERV1 -2 341 1 197 308 15 0 chr10 94539792 94539857 -51049431 + MIR SINE MIR 46 111 -97 892 261 142 35 chr10 94540110 94540135 -51049153 + LTR33 LTR ERVL 81 102 -419 4051 83 5 0 chr10 94540135 94540686 -51048602 + MER41A LTR ERV1 1 554 0 892 261 142 35 chr10 94540686 94541055 -51048233 + LTR33 LTR ERVL 102 517 -4 2044 109 10 20 chr10 94541417 94541747 -51047541 + AluSx SINE Alu 1 312 0 341 308 19 51 chr10 94542339 94542495 -51046793 + L1M4 LINE L1 4876 5026 -1120 925 169 29 0 chr10 94542518 94542690 -51046598 - MLT1F1 LTR MaLR 0 567 391 207 0 0 0 chr10 94542691 94542714 -51046574 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1107 122 0 26 chr10 94542714 94542870 -51046418 - FAM SINE Alu -24 161 10 475 227 92 0 chr10 94542873 94542992 -51046296 - MLT1F1 LTR MaLR -167 400 271 * 977 254 107 26 chr10 94542978 94543325 -51045963 - MLT1J2 LTR MaLR -73 377 3 420 337 65 15 chr10 94543634 94543833 -51045455 + LTR33 LTR ERVL 3 211 -310 595 167 0 0 chr10 94543915 94544040 -51045248 + FLAM_A SINE Alu 20 144 0 1849 133 65 0 chr10 94544075 94544353 -51044935 + AluSx SINE Alu 1 296 -16 494 190 89 67 chr10 94544362 94544438 -51044850 - L1MB4 LINE L1 -27 6153 6080 1455 96 55 0 chr10 94544438 94544656 -51044632 + MER30 DNA MER1_type 1 230 0 494 190 89 67 chr10 94544656 94544758 -51044530 - L1MB4 LINE L1 -100 6080 5971 1277 78 6 0 chr10 94544869 94545048 -51044240 + (TTCCC)n Simple_repeat Simple_repeat 1 180 0 366 182 0 30 chr10 94545057 94545156 -51044132 + CT-rich Low_complexity Low_complexity 3 98 0 3797 76 12 13 chr10 94545258 94546257 -51043031 - L1P2 LINE L1 -432 5723 4731 540 120 0 0 chr10 94546396 94546471 -51042817 - AluS SINE Alu -234 76 2 2105 112 0 60 chr10 94546472 94546803 -51042485 - AluSx SINE Alu -1 311 1 22 35 0 0 chr10 94546849 94546878 -51042410 + AT_rich Low_complexity Low_complexity 1 29 0 312 289 72 36 chr10 94546878 94547044 -51042244 - HAL1b LINE L1 -746 602 431 31 0 0 0 chr10 94547081 94547112 -51042176 + AT_rich Low_complexity Low_complexity 1 31 0 320 242 40 57 chr10 94547112 94547236 -51042052 - AluSq/x SINE Alu -176 127 6 284 262 12 98 chr10 94547253 94547417 -51041871 - FRAM SINE Alu -8 158 9 332 274 166 32 chr10 94547650 94547807 -51041481 - MIR SINE MIR -66 196 19 2303 119 0 0 chr10 94547974 94548269 -51041019 + AluSx SINE Alu 1 295 -17 2446 108 0 3 chr10 94551330 94551644 -51037644 - AluSq SINE Alu 0 313 1 340 271 111 37 chr10 94551650 94551773 -51037515 - L1ME4a LINE L1 -1 6120 6008 2282 89 10 13 chr10 94551773 94552075 -51037213 - AluSx SINE Alu -11 301 1 340 271 111 37 chr10 94552075 94552428 -51036860 - L1ME4a LINE L1 -113 6008 5524 2236 114 7 0 chr10 94553400 94553698 -51035590 - AluSx SINE Alu -12 300 1 852 180 62 0 chr10 94553856 94554017 -51035271 - FAM SINE Alu -4 171 1 2091 114 40 7 chr10 94554091 94554388 -51034900 + AluSx SINE Alu 1 307 -5 303 170 0 0 chr10 94554388 94554435 -51034853 - L1MC4 LINE L1 -1344 6698 6652 275 329 171 19 chr10 94554660 94555080 -51034208 - HAL1 LINE L1 -874 1633 1150 775 154 66 186 chr10 94555113 94555490 -51033798 - L1MC4 LINE L1 -1 8041 7710 999 193 0 0 chr10 94555508 94555674 -51033614 - FRAM SINE Alu -16 160 1 599 151 28 0 chr10 94556271 94556377 -51032911 - L1PA16 LINE L1 -49 6117 6009 2300 95 0 14 chr10 94556570 94556864 -51032424 - AluSq SINE Alu -13 300 11 2302 107 0 0 chr10 94557627 94557918 -51031370 + AluSx SINE Alu 1 291 -21 979 65 0 0 chr10 94558189 94558312 -51030976 - AluSg/x SINE Alu -9 301 179 1883 127 58 22 chr10 94558937 94559298 -51029990 - THE1C LTR MaLR 0 375 2 432 156 26 0 chr10 94560522 94560599 -51028689 - AluJ/FRAM SINE Alu -16 296 218 776 136 15 30 chr10 94560600 94560732 -51028556 - AluJo/FLAM SINE Alu -172 130 1 286 203 31 0 chr10 94560824 94560888 -51028400 - MIR SINE MIR -110 98 33 1910 148 21 0 chr10 94561090 94561381 -51027907 - AluJo SINE Alu -15 297 1 364 296 56 42 chr10 94561388 94561530 -51027758 - MIR3 SINE MIR -64 144 1 2473 66 10 0 chr10 94562028 94562329 -51026959 + AluSp SINE Alu 1 304 -9 2575 71 0 0 chr10 94562330 94562639 -51026649 + AluSg SINE Alu 2 310 0 507 17 0 0 chr10 94562954 94563014 -51026274 + (TG)n Simple_repeat Simple_repeat 2 61 0 1076 139 0 0 chr10 94563014 94563165 -51026123 - AluSg/x SINE Alu -28 284 134 2426 55 24 0 chr10 94563165 94563457 -51025831 - AluSq SINE Alu -14 299 1 182 222 167 0 chr10 94564171 94564225 -51025063 + MIR SINE MIR 65 127 -135 1493 146 41 17 chr10 94564383 94564664 -51024624 - MER44D DNA MER2_type -1898 593 320 1956 164 7 7 chr10 94564664 94564974 -51024314 + AluJb SINE Alu 1 310 -2 1493 146 41 17 chr10 94564974 94564986 -51024302 - MER44D DNA MER2_type -2171 320 23 327 294 102 17 chr10 94567730 94567907 -51021381 - MER117 DNA MER1_type -3 194 3 346 225 108 18 chr10 94569274 94569385 -51019903 + MIR SINE MIR 33 153 -109 312 299 203 8 chr10 94570173 94570414 -51018874 - L2 LINE L2 -536 2778 2491 2278 91 0 17 chr10 94570521 94570818 -51018470 - AluSg SINE Alu -18 292 1 2722 239 55 52 chr10 94570847 94571099 -51018189 + HAL1 LINE L1 618 868 -1639 2064 137 31 0 chr10 94571099 94571391 -51017897 + AluJo SINE Alu 1 301 -11 2722 239 55 52 chr10 94571391 94571819 -51017469 + HAL1 LINE L1 868 1305 -1202 1960 153 3 10 chr10 94571819 94572119 -51017169 + AluJo SINE Alu 1 298 -14 2722 239 55 52 chr10 94572119 94572498 -51016790 + HAL1 LINE L1 1305 1681 -826 626 209 16 8 chr10 94572563 94572692 -51016596 + FLAM_C SINE Alu 2 131 -2 2211 113 0 0 chr10 94572741 94573063 -51016225 + AluSx SINE Alu 1 322 0 845 172 15 0 chr10 94573069 94573203 -51016085 + AluJo SINE Alu 1 136 -176 2025 131 23 7 chr10 94573212 94573517 -51015771 + AluSg SINE Alu 1 310 0 671 271 133 7 chr10 94573623 94573925 -51015363 + HAL1 LINE L1 1701 2040 -467 1120 93 0 0 chr10 94574115 94574254 -51015034 + AluSp/q SINE Alu 163 301 -12 437 248 117 0 chr10 94574265 94574410 -51014878 + HAL1 LINE L1 2306 2467 -40 1091 208 0 39 chr10 94574419 94574468 -51014820 - MER58A DNA MER1_type -2198 222 173 824 180 78 12 chr10 94574468 94574635 -51014653 - MER45A DNA AcHobo 0 178 1 1091 208 0 39 chr10 94574635 94574816 -51014472 - MER58A DNA MER1_type -2247 173 1 1841 159 31 0 chr10 94574915 94575205 -51014083 + AluJb SINE Alu 3 301 -11 4548 72 21 6 chr10 94575544 94576651 -51012637 - MER11A LTR ERVK 0 1266 1 697 170 19 82 chr10 94576725 94576884 -51012404 + MER20 DNA MER1_type 70 218 -1 365 254 43 0 chr10 94579712 94579829 -51009459 + MIR SINE MIR 44 165 -43 229 200 88 50 chr10 94580379 94580459 -51008829 - MIR SINE MIR -74 188 106 29 28 0 0 chr10 94581969 94582005 -51007283 + GC_rich Low_complexity Low_complexity 1 36 0 1038 69 15 0 chr10 94582305 94582435 -51006853 - AluSq/x SINE Alu -181 132 1 1215 153 160 7 chr10 94582740 94583028 -51006260 - L1MA4 LINE L1 -1 6299 5968 465 260 73 21 chr10 94583183 94583385 -51005903 - L1MC4a LINE L1 -161 5960 5749 1059 191 40 0 chr10 94584414 94584613 -51004675 - MER58A DNA MER1_type -16 208 2 1922 147 17 3 chr10 94584914 94585213 -51004075 + AluSx SINE Alu 1 303 -9 22 35 0 0 chr10 94585698 94585727 -51003561 + AT_rich Low_complexity Low_complexity 1 29 0 192 301 73 49 chr10 94586205 94586328 -51002960 + L2 LINE L2 2918 3043 -229 1417 89 5 0 chr10 94587068 94587258 -51002030 - L1PA5 LINE L1 0 6154 5964 31 0 0 0 chr10 94587258 94587289 -51001999 + AT_rich Low_complexity Low_complexity 1 31 0 2343 79 0 0 chr10 94587346 94587650 -51001638 - AluY SINE Alu -6 305 2 661 257 40 23 chr10 94589473 94589648 -50999640 + MER5B DNA MER1_type 1 178 0 324 215 85 94 chr10 94589648 94589814 -50999474 + MIR3 SINE MIR 48 207 -1 1205 79 0 0 chr10 94589963 94590115 -50999173 + AluSp SINE Alu 130 281 -32 623 283 0 0 chr10 94590144 94590303 -50998985 + FRAM SINE Alu 2 160 -6 740 244 6 0 chr10 94590924 94591080 -50998208 - MER20 DNA MER1_type -3 216 60 1676 216 184 32 chr10 94591096 94591262 -50998026 - Charlie1a DNA MER1_type -1487 1274 1135 2032 124 0 0 chr10 94591262 94591561 -50997727 + AluY SINE Alu 1 299 -12 1676 216 184 32 chr10 94591561 94591575 -50997713 - Charlie1a DNA MER1_type -1626 1135 1124 1985 129 3 0 chr10 94591575 94591870 -50997418 + AluSx SINE Alu 5 300 -12 1676 216 184 32 chr10 94591870 94592347 -50996941 - Charlie1a DNA MER1_type -1637 1124 492 1280 175 101 30 chr10 94592347 94592615 -50996673 - AluJo SINE Alu -15 287 1 1676 216 184 32 chr10 94592615 94592682 -50996606 - Charlie1a DNA MER1_type -2269 492 437 950 223 114 11 chr10 94592704 94592977 -50996311 - Charlie1a DNA MER1_type -1069 386 86 2021 112 0 0 chr10 94593043 94593319 -50995969 + AluSq SINE Alu 1 276 -37 331 289 0 12 chr10 94593340 94593423 -50995865 - Charlie1a DNA MER1_type -1373 82 1 1856 104 6 89 chr10 94594221 94594548 -50994740 - AluSg SINE Alu -10 300 1 1996 108 3 7 chr10 94596532 94596828 -50992460 - AluY SINE Alu -3 308 14 250 299 39 49 chr10 94597205 94597409 -50991879 - AluJb SINE Alu -98 204 3 49 0 0 0 chr10 94597534 94597583 -50991705 + AT_rich Low_complexity Low_complexity 1 49 0 1319 116 10 0 chr10 94597741 94597939 -50991349 + AluY SINE Alu 102 301 -10 669 220 0 8 chr10 94598472 94598604 -50990684 + FLAM_A SINE Alu 1 131 -2 1530 172 3 34 chr10 94598607 94598903 -50990385 + AluJo SINE Alu 1 287 -25 309 336 218 24 chr10 94599063 94599444 -50989844 - L2 LINE L2 -5 3308 2854 511 172 54 0 chr10 94599452 94599545 -50989743 + LTR47B LTR ERVL 5 102 -341 2218 99 0 0 chr10 94599555 94599857 -50989431 - AluSx SINE Alu -10 302 1 1364 158 28 28 chr10 94599858 94600105 -50989183 + LTR47A LTR ERVL 206 452 0 3076 148 20 56 chr10 94600109 94600715 -50988573 + L1MB2 LINE L1 5586 6169 -2 2078 110 10 3 chr10 94600726 94601027 -50988261 - AluSx SINE Alu -9 303 1 1987 102 3 14 chr10 94601042 94601352 -50987936 - AluSp SINE Alu 0 307 1 2111 116 7 0 chr10 94601353 94601656 -50987632 - AluSp SINE Alu -8 305 1 1635 232 45 30 chr10 94601670 94602161 -50987127 + L1MC4a LINE L1 7160 7657 -151 51 42 0 0 chr10 94602166 94602238 -50987050 + AT_rich Low_complexity Low_complexity 1 72 0 244 286 89 18 chr10 94602257 94602369 -50986919 + L1MD3 LINE L1 7819 7938 -57 348 64 0 0 chr10 94602999 94603046 -50986242 + (TCC)n Simple_repeat Simple_repeat 2 48 0 2024 106 0 3 chr10 94603113 94603447 -50985841 + AluSq SINE Alu 1 333 0 1080 262 181 7 chr10 94603501 94603932 -50985356 + LTR33 LTR ERVL 15 520 -1 300 110 0 20 chr10 94605499 94605555 -50983733 + MER69 DNA AcHobo 2444 2498 -28 277 56 0 0 chr10 94606077 94606113 -50983175 - MIR SINE MIR -114 148 113 1995 143 0 3 chr10 94607516 94607824 -50981464 - AluSx SINE Alu -5 307 1 184 284 34 45 chr10 94607996 94608037 -50981251 - MIR SINE MIR -74 188 148 2535 69 27 0 chr10 94608037 94608372 -50980916 + LTR14A LTR ERVK 1 344 0 184 284 34 45 chr10 94608372 94608418 -50980870 - MIR SINE MIR -114 148 102 2332 78 0 3 chr10 94609341 94609647 -50979641 + AluY SINE Alu 1 305 -6 2174 67 42 0 chr10 94609649 94609932 -50979356 + AluY SINE Alu 2 296 -15 457 287 44 65 chr10 94610030 94610102 -50979186 + L1M4 LINE L1 4981 5053 -1093 1365 142 151 57 chr10 94610102 94610135 -50979153 - MLT1A1 LTR MaLR -2 363 334 2007 135 0 0 chr10 94610135 94610432 -50978856 + AluSx SINE Alu 1 297 -15 1365 142 151 57 chr10 94610432 94610730 -50978558 - MLT1A1 LTR MaLR -31 334 1 457 287 44 65 chr10 94610730 94610932 -50978356 + L1M4 LINE L1 5053 5249 -897 370 298 16 0 chr10 94610940 94611061 -50978227 + L1P LINE L1 5305 5427 -729 1035 123 32 73 chr10 94611477 94611643 -50977645 - L1MA4A LINE L1 -4 6299 6143 1960 112 0 77 chr10 94611643 94611981 -50977307 - AluSx SINE Alu 0 312 1 1035 123 32 73 chr10 94611981 94612033 -50977255 - L1MA4A LINE L1 -160 6143 6090 2170 102 0 0 chr10 94612527 94612821 -50976467 - AluY SINE Alu -17 294 1 329 176 13 6 chr10 94614199 94614285 -50975003 + Alu SINE Alu 1 42 -261 735 108 125 0 chr10 94614518 94614638 -50974650 + FLAM_C SINE Alu 6 140 -3 1141 127 70 150 chr10 94615335 94615649 -50973639 + AluYb8 SINE Alu 11 299 -19 1853 122 7 11 chr10 94615803 94616109 -50973179 - AluSx SINE Alu 0 305 1 267 303 59 59 chr10 94616239 94616278 -50973010 - MIR SINE MIR -100 162 124 2275 90 3 0 chr10 94616278 94616577 -50972711 + AluSp SINE Alu 1 300 -13 267 303 59 59 chr10 94616577 94616689 -50972599 - MIR SINE MIR -137 125 11 1809 157 0 0 chr10 94616818 94617117 -50972171 - AluJb SINE Alu -8 304 6 22 0 0 0 chr10 94617369 94617391 -50971897 + AT_rich Low_complexity Low_complexity 1 22 0 3583 182 90 16 chr10 94617410 94618527 -50970761 - L1MB7 LINE L1 -216 5968 4716 2202 101 3 3 chr10 94618527 94618825 -50970463 - AluSx SINE Alu -14 298 1 3583 182 90 16 chr10 94618825 94619126 -50970162 - L1MB7 LINE L1 -1468 4716 4439 890 198 59 50 chr10 94619413 94619480 -50969808 - L1MB7 LINE L1 -1697 4449 4384 677 221 0 0 chr10 94619480 94619607 -50969681 - FLAM_A SINE Alu -6 127 1 890 198 59 50 chr10 94619607 94619674 -50969614 - L1MB7 LINE L1 -1762 4384 4319 1566 167 0 18 chr10 94619674 94619949 -50969339 + AluSx SINE Alu 1 270 -42 890 198 59 50 chr10 94619949 94620116 -50969172 - L1MB7 LINE L1 -1827 4319 4144 609 244 26 5 chr10 94620118 94620284 -50969004 - L1MC4a LINE L1 -357 5827 5650 827 174 72 82 chr10 94620381 94620473 -50968815 - AluJo SINE Alu -99 213 122 2101 129 0 3 chr10 94620473 94620776 -50968512 + AluSx SINE Alu 1 302 -10 827 174 72 82 chr10 94620776 94620890 -50968398 - AluJo SINE Alu -190 122 9 2254 90 0 0 chr10 94620977 94621266 -50968022 + AluSc SINE Alu 1 289 -20 31 44 0 0 chr10 94621266 94621311 -50967977 + AT_rich Low_complexity Low_complexity 1 45 0 2302 81 3 13 chr10 94621999 94622306 -50966982 + AluSx SINE Alu 1 304 -8 2052 91 49 0 chr10 94622313 94622598 -50966690 + AluSq SINE Alu 1 299 -14 193 56 28 28 chr10 94622633 94622669 -50966619 + (TAAAAA)n Simple_repeat Simple_repeat 2 37 0 2097 105 7 0 chr10 94622709 94623004 -50966284 - AluSg SINE Alu -13 297 1 482 297 109 55 chr10 94623553 94623937 -50965351 - MLT1L LTR MaLR -8 607 203 2207 95 0 3 chr10 94624047 94624352 -50964936 - AluSq SINE Alu -9 304 1 2133 117 0 3 chr10 94625178 94625487 -50963801 + AluSq SINE Alu 1 308 -5 479 355 86 12 chr10 94625504 94625831 -50963457 - L2 LINE L2 -215 3098 2741 789 154 0 70 chr10 94625901 94625925 -50963363 - FLAM_C SINE Alu -169 133 109 1746 154 10 19 chr10 94625925 94626098 -50963190 - AluSx SINE Alu -3 309 139 2107 104 17 0 chr10 94626098 94626396 -50962892 - AluSp SINE Alu -10 303 1 1746 154 10 19 chr10 94626396 94626534 -50962754 - AluSx SINE Alu -173 139 1 789 154 0 70 chr10 94626534 94626652 -50962636 - FLAM_C SINE Alu -193 109 1 2055 101 10 3 chr10 94627349 94627646 -50961642 - AluSq SINE Alu -14 299 1 1860 134 0 7 chr10 94628053 94628337 -50960951 + AluJo SINE Alu 1 282 -30 186 43 0 0 chr10 94628340 94628363 -50960925 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2083 108 7 3 chr10 94628375 94628671 -50960617 + AluSg SINE Alu 1 297 -13 715 186 59 3 chr10 94628738 94628895 -50960393 + L1M4 LINE L1 4994 5163 -983 1991 125 3 3 chr10 94628895 94629192 -50960096 - AluSx SINE Alu -15 297 1 715 186 59 3 chr10 94629192 94629221 -50960067 + L1M4 LINE L1 5163 5189 -957 24 0 0 0 chr10 94629304 94629328 -50959960 + AT_rich Low_complexity Low_complexity 1 24 0 1965 118 0 43 chr10 94629328 94629651 -50959637 - AluSx SINE Alu -3 309 1 22 35 0 0 chr10 94629697 94629726 -50959562 + AT_rich Low_complexity Low_complexity 1 29 0 253 265 72 36 chr10 94629726 94629892 -50959396 - HAL1b LINE L1 -746 602 431 741 154 15 8 chr10 94629946 94630076 -50959212 - AluJo SINE Alu -176 136 6 1698 142 10 43 chr10 94630091 94630393 -50958895 - AluJo SINE Alu -18 294 3 1841 149 7 3 chr10 94630550 94630846 -50958442 + AluJo SINE Alu 1 297 -15 537 165 0 0 chr10 94630853 94630950 -50958338 + (TG)n Simple_repeat Simple_repeat 2 98 0 986 131 19 72 chr10 94630951 94631063 -50958225 - L1M4 LINE L1 -487 5691 5587 1991 131 3 13 chr10 94631063 94631376 -50957912 - AluSg SINE Alu 0 310 1 986 131 19 72 chr10 94631376 94631476 -50957812 - L1M4 LINE L1 -591 5587 5483 1153 161 0 0 chr10 94631476 94631650 -50957638 - FAM SINE Alu -1 174 1 321 232 61 94 chr10 94631655 94631836 -50957452 - L1MCa LINE L1 -5109 1317 1143 2004 213 67 67 chr10 94632088 94632165 -50957123 + L1MC4a LINE L1 5865 5941 -1867 2196 113 0 0 chr10 94632165 94632474 -50956814 + AluSg SINE Alu 1 309 -1 2004 213 67 67 chr10 94632474 94632510 -50956778 + L1MC4a LINE L1 5941 5976 -1832 1786 160 21 0 chr10 94632510 94632797 -50956491 + AluSx SINE Alu 1 293 -19 2004 213 67 67 chr10 94632797 94633416 -50955872 + L1MC4a LINE L1 5975 6598 -1210 797 157 0 8 chr10 94633442 94633563 -50955725 + AluJb SINE Alu 1 120 -192 1532 119 0 0 chr10 94633775 94633994 -50955294 - AluSg/x SINE Alu -9 301 83 985 215 6 0 chr10 94634843 94635020 -50954268 - MER45A DNA AcHobo 0 178 1 1970 114 46 10 chr10 94635081 94635388 -50953900 + THE1C LTR MaLR 1 318 -57 1240 65 76 5 chr10 94635387 94635572 -50953716 - PABL_B LTR ERV1 -221 446 249 * 2192 113 0 0 chr10 94636487 94636797 -50952491 - AluSg SINE Alu 0 310 1 371 302 43 36 chr10 94637351 94637490 -50951798 - MIR3 SINE MIR -49 159 20 6328 41 16 1 chr10 94638365 94639129 -50950159 - L1PA5 LINE L1 -2 6152 5378 234 257 130 58 chr10 94639563 94639902 -50949386 - HAL1 LINE L1 -1042 1465 1152 2726 35 0 3 chr10 94639902 94640214 -50949074 - AluY SINE Alu 0 311 1 234 257 130 58 chr10 94640214 94640401 -50948887 - HAL1 LINE L1 -1355 1152 828 3604 193 22 39 chr10 94640408 94641208 -50948080 - L1MB3 LINE L1 -1 6182 5396 349 233 57 85 chr10 94641192 94641368 -50947920 - HAL1 LINE L1 -1648 859 689 * 8993 170 35 9 chr10 94641365 94644214 -50945074 - L1MA3 LINE L1 0 6305 3379 479 287 48 88 chr10 94644203 94644579 -50944709 - HAL1 LINE L1 -1808 699 339 * 1175 268 32 0 chr10 94644762 94645075 -50944213 + L1M4 LINE L1 3437 3759 -2387 2272 104 0 0 chr10 94645076 94645364 -50943924 + AluSx SINE Alu 1 288 -24 290 235 24 0 chr10 94645364 94645449 -50943839 + L1MC4 LINE L1 6617 6703 -1339 227 321 0 0 chr10 94645468 94645552 -50943736 + L1MC4 LINE L1 6615 6698 -1344 256 259 47 0 chr10 94645556 94645641 -50943647 + L1MC4 LINE L1 6615 6703 -1339 2097 210 38 20 chr10 94645643 94646138 -50943150 + L1M4 LINE L1 3751 4254 -1892 490 295 152 14 chr10 94646823 94647040 -50942248 - MIR SINE MIR -14 248 2 1553 166 42 65 chr10 94648079 94648386 -50940902 - AluJb SINE Alu -12 300 1 22 56 0 0 chr10 94649058 94649094 -50940194 + AT_rich Low_complexity Low_complexity 1 36 0 300 295 31 16 chr10 94649252 94649381 -50939907 - MIR SINE MIR -36 226 96 2211 96 14 0 chr10 94649637 94649928 -50939360 + AluSp SINE Alu 3 297 -16 733 181 8 8 chr10 94650028 94650155 -50939133 - AluY SINE Alu -183 128 2 216 163 0 0 chr10 94650207 94650250 -50939038 + A-rich Low_complexity Low_complexity 1 43 0 2194 119 0 10 chr10 94650464 94650775 -50938513 + AluSg SINE Alu 1 308 -2 1801 163 3 7 chr10 94650953 94651248 -50938040 + AluJb SINE Alu 1 294 -18 188 278 56 69 chr10 94651560 94651632 -50937656 - MIR SINE MIR -119 89 19 21 36 0 0 chr10 94651758 94651786 -50937502 + AT_rich Low_complexity Low_complexity 1 28 0 570 82 0 0 chr10 94651794 94651867 -50937421 + U3 snRNA snRNA 1 73 -144 2202 117 0 28 chr10 94653616 94653757 -50935531 + AluSx SINE Alu 1 144 -168 2147 109 3 16 chr10 94653757 94654069 -50935219 + AluSx SINE Alu 5 312 0 2202 117 0 28 chr10 94654069 94654244 -50935044 + AluSx SINE Alu 144 308 -4 336 226 91 9 chr10 94654244 94654378 -50934910 + L1MB7 LINE L1 6039 6178 0 391 244 104 0 chr10 94655475 94655590 -50933698 - MIR SINE MIR -66 142 16 231 313 172 10 chr10 94655720 94655819 -50933469 - L2 LINE L2 -17 3255 3141 2808 264 173 8 chr10 94655821 94656971 -50932317 - L2 LINE L2 -1090 2224 885 2520 63 0 16 chr10 94657382 94657697 -50931591 + AluSg SINE Alu 1 310 0 2359 85 0 7 chr10 94658477 94658783 -50930505 - AluSq SINE Alu -9 304 1 328 265 157 34 chr10 94658830 94658977 -50930311 - L1ME LINE L1 -452 5669 5505 2050 102 7 4 chr10 94659200 94659475 -50929813 - AluSc SINE Alu -33 276 1 425 138 0 0 chr10 94659492 94659550 -50929738 - FLAM SINE Alu -19 124 67 21 0 0 0 chr10 94659663 94659684 -50929604 + AT_rich Low_complexity Low_complexity 1 21 0 2250 86 0 0 chr10 94660076 94660356 -50928932 - AluY SINE Alu -31 280 1 2295 94 0 3 chr10 94660799 94661097 -50928191 + AluSc SINE Alu 1 297 -12 607 186 0 9 chr10 94662674 94662787 -50926501 + L1MB8 LINE L1 6066 6177 -1 1995 93 48 4 chr10 94663431 94663700 -50925588 + AluSx SINE Alu 4 284 -28 2093 127 3 13 chr10 94663808 94663971 -50925317 - AluSx SINE Alu -15 297 137 2313 87 0 3 chr10 94663971 94664270 -50925018 - AluSc SINE Alu -11 298 1 2093 127 3 13 chr10 94664270 94664406 -50924882 - AluSx SINE Alu -175 137 1 2248 92 3 0 chr10 94665244 94665560 -50923728 - AluSp SINE Alu 0 318 2 2265 50 3 107 chr10 94666063 94666401 -50922887 - AluY SINE Alu -8 303 1 1535 71 95 9 chr10 94667277 94667488 -50921800 + AluSg/x SINE Alu 81 309 -3 600 125 0 0 chr10 94667515 94667595 -50921693 - AluS SINE Alu -233 80 1 588 273 119 31 chr10 94667904 94668131 -50921157 - MIR SINE MIR -2 260 14 251 313 100 62 chr10 94668519 94668759 -50920529 + L2 LINE L2 2721 2969 -345 1894 141 46 0 chr10 94669431 94669714 -50919574 - AluJb SINE Alu -16 296 1 312 351 101 5 chr10 94671115 94671303 -50917985 + L1MC4a LINE L1 5717 5922 -1886 2246 97 10 10 chr10 94671423 94671722 -50917566 + AluSg SINE Alu 1 299 -11 234 91 0 0 chr10 94672039 94672072 -50917216 + (CAA)n Simple_repeat Simple_repeat 1 33 0 871 117 7 41 chr10 94672360 94672505 -50916783 + FLAM_C SINE Alu 1 140 -3 2295 90 0 0 chr10 94672507 94672806 -50916482 + AluSc SINE Alu 1 299 -10 2410 82 3 0 chr10 94673037 94673340 -50915948 + AluY SINE Alu 1 304 -7 1538 177 3 54 chr10 94673521 94673838 -50915450 - AluSg SINE Alu -9 301 1 216 163 0 0 chr10 94674052 94674095 -50915193 + T-rich Low_complexity Low_complexity 1 43 0 2332 71 7 3 chr10 94674146 94674440 -50914848 + AluY SINE Alu 1 295 -16 21 57 0 0 chr10 94674574 94674609 -50914679 + AT_rich Low_complexity Low_complexity 1 35 0 2201 128 0 0 chr10 94674655 94674953 -50914335 - AluSx SINE Alu -14 298 1 819 208 153 0 chr10 94674967 94675150 -50914138 - MER20 DNA MER1_type -4 215 5 238 232 24 120 chr10 94675157 94675282 -50914006 - HAL1 LINE L1 -36 2471 2359 715 189 110 100 chr10 94675290 94675370 -50913918 - L1M4 LINE L1 -803 5343 5265 755 219 0 0 chr10 94675370 94675489 -50913799 + FLAM_A SINE Alu 1 119 -14 715 189 110 100 chr10 94675489 94675689 -50913599 - L1M4 LINE L1 -881 5265 5060 1056 105 19 91 chr10 94675705 94675914 -50913374 - AluJb SINE Alu 0 312 119 556 169 0 11 chr10 94676017 94676106 -50913182 - AluJ/FLAM SINE Alu -223 89 2 1552 69 0 25 chr10 94676149 94676382 -50912906 + AluY SINE Alu 89 311 0 1428 204 64 83 chr10 94676382 94676803 -50912485 + L1M4c LINE L1 1320 1732 -4652 1930 114 46 11 chr10 94676859 94677139 -50912149 + AluSg SINE Alu 1 290 -20 626 202 61 0 chr10 94677164 94677278 -50912010 + AluJo SINE Alu 14 134 -178 1324 209 57 17 chr10 94677282 94677579 -50911709 + AluJo SINE Alu 1 309 -3 2153 127 0 0 chr10 94677592 94677884 -50911404 + AluSx SINE Alu 1 292 -20 620 235 94 19 chr10 94677884 94678052 -50911236 + L1M4c LINE L1 1726 1880 -4504 2485 71 0 0 chr10 94678052 94678346 -50910942 + AluY SINE Alu 1 294 -17 620 235 94 19 chr10 94678346 94678526 -50910762 + L1M4c LINE L1 1880 2194 -4190 1741 161 30 16 chr10 94678882 94679187 -50910101 - AluSx SINE Alu -3 309 1 1787 155 0 7 chr10 94679196 94679474 -50909814 - AluJb SINE Alu -23 289 14 547 122 56 0 chr10 94679488 94679578 -50909710 - AluJb SINE Alu -12 300 206 2618 228 62 46 chr10 94679614 94680014 -50909274 + L1M4c LINE L1 2370 2762 -3620 1617 174 0 0 chr10 94680014 94680272 -50909016 - AluJb SINE Alu -54 258 1 2618 228 62 46 chr10 94680272 94680506 -50908782 + L1M4c LINE L1 2762 2991 -3391 2007 124 3 29 chr10 94680506 94680820 -50908468 + AluJb SINE Alu 1 306 -6 1982 141 0 7 chr10 94680822 94681119 -50908169 + AluSx SINE Alu 1 295 -17 2618 228 62 46 chr10 94681119 94681363 -50907925 + L1M4c LINE L1 2991 3266 -3116 1981 84 58 22 chr10 94681363 94681637 -50907651 + AluY SINE Alu 4 287 -24 782 99 30 0 chr10 94681680 94681781 -50907507 + U6 snRNA snRNA 2 105 -2 23 0 0 0 chr10 94681781 94681804 -50907484 + AT_rich Low_complexity Low_complexity 1 23 0 2137 130 7 3 chr10 94681804 94682111 -50907177 + AluSc SINE Alu 1 308 -1 1147 106 97 84 chr10 94682148 94682205 -50907083 + MER30 DNA MER1_type 2 57 -173 1989 186 101 31 chr10 94682205 94682662 -50906626 + LTR2B LTR ERV1 1 489 -1 1147 106 97 84 chr10 94682662 94682830 -50906458 + MER30 DNA MER1_type 57 230 0 1121 240 44 3 chr10 94682841 94683229 -50906059 + L1M4c LINE L1 3320 3723 -2659 1677 175 4 4 chr10 94683260 94683529 -50905759 + AluJb SINE Alu 1 269 -43 318 199 29 2 chr10 94683543 94683619 -50905669 + L1M4c LINE L1 4488 4564 -1818 12139 204 40 19 chr10 94683634 94687522 -50901766 + L1PA13 LINE L1 2 3804 -2993 2247 119 0 19 chr10 94687522 94687840 -50901448 + AluSx SINE Alu 1 312 0 12139 204 40 19 chr10 94687840 94688321 -50900967 + L1PA13 LINE L1 3804 4273 -2524 898 133 0 0 chr10 94688321 94688441 -50900847 + AluY SINE Alu 1 120 -191 1994 204 92 24 chr10 94688441 94688898 -50900390 - LTR2B LTR ERV1 0 490 3 1496 77 0 0 chr10 94688898 94689080 -50900208 + AluY SINE Alu 115 296 -15 12139 204 40 19 chr10 94689080 94689356 -50899932 + L1PA13 LINE L1 4272 4764 -2033 437 170 0 70 chr10 94689355 94689455 -50899833 - L1M4 LINE L1 -6283 259 167 * 240 188 0 0 chr10 94689475 94689523 -50899765 + LTR66 LTR ERVL 394 441 -169 696 102 0 10 chr10 94689542 94689640 -50899648 + MER4A LTR ERV1 2 98 -566 1994 122 3 19 chr10 94689640 94689991 -50899297 + MER4A LTR ERV1 261 664 0 3760 125 136 77 chr10 94689994 94691038 -50898250 + MER4A-int LTR ERV1 1 1205 -5393 360 119 0 0 chr10 94691038 94691097 -50898191 + (TG)n Simple_repeat Simple_repeat 2 60 0 3760 125 136 77 chr10 94691097 94691502 -50897786 + MER4A-int LTR ERV1 1205 1585 -5013 * 5505 159 105 36 chr10 94691500 94692704 -50896584 + pTR5 LTR ERV1 743 2029 -409 306 233 11 0 chr10 94692709 94692799 -50896489 + LTR30 LTR ERV1 553 643 -79 612 156 0 0 chr10 94692801 94692891 -50896397 + pTR5 LTR ERV1 303 392 -2046 * 1310 95 8 95 chr10 94692885 94693086 -50896202 + PABL_A-int LTR ERV1 750 896 -4119 2116 108 44 0 chr10 94693086 94693381 -50895907 - AluSq SINE Alu -5 308 1 1310 95 8 95 chr10 94693381 94693431 -50895857 + PABL_A-int LTR ERV1 896 949 -4066 2132 148 0 0 chr10 94693436 94693746 -50895542 - AluSx SINE Alu 0 312 3 206 174 333 0 chr10 94693876 94693945 -50895343 - MER5C DNA MER1_type -200 124 33 1757 156 50 20 chr10 94694158 94694460 -50894828 - AluSx SINE Alu -1 311 1 1083 225 78 58 chr10 94694577 94694746 -50894542 - AluJo SINE Alu -1 301 122 1970 148 3 0 chr10 94694746 94695043 -50894245 + AluSx SINE Alu 6 303 -9 1083 225 78 58 chr10 94695043 94695166 -50894122 - AluJo SINE Alu -180 122 3 1337 128 5 15 chr10 94695178 94695382 -50893906 - AluSp SINE Alu -17 296 95 21 71 0 0 chr10 94695785 94695827 -50893461 + AT_rich Low_complexity Low_complexity 1 42 0 1822 116 4 0 chr10 94695879 94696175 -50893113 + AluY SINE Alu 22 318 0 299 341 123 0 chr10 94696181 94696319 -50892969 - MIR SINE MIR -72 190 36 2280 57 3 63 chr10 94696609 94696924 -50892364 - AluSc SINE Alu -13 296 1 372 293 199 22 chr10 94697374 94697555 -50891733 - MIR SINE MIR -5 257 45 407 125 0 47 chr10 94697714 94697778 -50891510 + FLAM_A SINE Alu 69 129 -13 240 246 49 0 chr10 94698139 94698200 -50891088 + MER103 DNA DNA 2 65 -101 260 225 0 75 chr10 94698218 94698298 -50890990 + MIR SINE MIR 31 104 -158 318 189 63 53 chr10 94698388 94698483 -50890805 + MER103 DNA DNA 70 165 -1 2111 131 0 16 chr10 94698586 94698892 -50890396 - AluJb SINE Alu -11 301 1 2296 85 10 0 chr10 94698973 94699266 -50890022 - AluSp SINE Alu -17 296 1 680 327 123 35 chr10 94699399 94700401 -50888887 + L2 LINE L2 926 2015 -1299 257 253 162 10 chr10 94700394 94700493 -50888795 - L2 LINE L2 -5 3267 3154 * 379 253 55 45 chr10 94700677 94700879 -50888409 + L2 LINE L2 1716 1919 -1395 355 323 249 30 chr10 94700980 94701054 -50888234 + L2 LINE L2 2144 2200 -1114 2135 92 3 3 chr10 94701054 94701357 -50887931 + AluSx SINE Alu 2 304 0 355 323 249 30 chr10 94701357 94701651 -50887637 + L2 LINE L2 2200 2428 -886 2356 104 0 0 chr10 94701651 94701959 -50887329 - AluSx SINE Alu -2 310 3 355 323 249 30 chr10 94701959 94702053 -50887235 + L2 LINE L2 2428 2710 -604 284 28 0 28 chr10 94702059 94702095 -50887193 + U2 snRNA snRNA 1 35 -153 21 0 0 0 chr10 94702095 94702116 -50887172 + AT_rich Low_complexity Low_complexity 1 21 0 1876 155 10 0 chr10 94702379 94702675 -50886613 - AluSx SINE Alu -13 299 1 4412 142 28 75 chr10 94702687 94703047 -50886241 - L1MB7 LINE L1 -28 6156 5780 2250 113 7 0 chr10 94703047 94703356 -50885932 - AluSp SINE Alu -2 311 1 4412 142 28 75 chr10 94703356 94703733 -50885555 - L1MB7 LINE L1 -404 5780 5387 191 35 0 35 chr10 94703733 94703762 -50885526 + (TTA)n Simple_repeat Simple_repeat 2 29 0 1412 146 123 8 chr10 94703765 94704018 -50885270 - AluJb SINE Alu -30 282 1 4412 142 28 75 chr10 94704018 94704148 -50885140 - L1MB7 LINE L1 -799 5385 5337 2381 78 0 3 chr10 94704148 94704444 -50884844 - AluY SINE Alu -16 295 1 4412 142 28 75 chr10 94704444 94704623 -50884665 - L1MB7 LINE L1 -847 5337 5151 812 172 0 0 chr10 94704623 94704739 -50884549 + FLAM_C SINE Alu 2 117 -26 980 158 0 18 chr10 94704743 94704907 -50884381 - AluSg/x SINE Alu -15 294 134 1708 123 28 7 chr10 94705055 94705340 -50883948 + AluSp SINE Alu 3 293 -20 1866 157 7 0 chr10 94705409 94705702 -50883586 - AluSx SINE Alu -17 295 1 251 259 0 0 chr10 94705703 94705761 -50883527 + MIR SINE MIR 56 113 -149 2063 139 7 7 chr10 94706034 94706344 -50882944 - AluSx SINE Alu -2 310 1 189 0 0 0 chr10 94706453 94706474 -50882814 + (A)n Simple_repeat Simple_repeat 1 21 0 1503 82 0 10 chr10 94706672 94706866 -50882422 - MER107 DNA MER1_type -2 195 4 2444 88 0 0 chr10 94707048 94707356 -50881932 - AluY SINE Alu -3 308 1 886 88 53 0 chr10 94707359 94707473 -50881815 - AluSq/x SINE Alu -179 133 14 1044 181 106 0 chr10 94707578 94707777 -50881511 - AluSg/x SINE Alu -9 303 84 441 189 0 0 chr10 94707827 94707901 -50881387 - L1MB4 LINE L1 -66 6114 6041 733 221 34 0 chr10 94707901 94708050 -50881238 + MSTB LTR MaLR 1 154 -272 2034 138 3 0 chr10 94708482 94708771 -50880517 + AluJb SINE Alu 8 297 -15 1860 162 10 0 chr10 94708967 94709263 -50880025 - AluJb SINE Alu -13 299 1 2198 112 3 6 chr10 94709674 94709988 -50879300 + AluSq SINE Alu 1 313 0 1419 55 0 0 chr10 94709988 94710152 -50879136 + AluSq SINE Alu 124 287 -26 1748 192 7 3 chr10 94710296 94710598 -50878690 - AluJo SINE Alu -7 305 3 225 275 17 142 chr10 94711091 94711211 -50878077 - L2 LINE L2 -2 3270 3166 420 292 8 25 chr10 94711951 94712071 -50877217 - MIR SINE MIR -35 227 110 321 266 98 35 chr10 94712308 94712481 -50876807 - HAL1 LINE L1 -27 2480 2297 376 254 134 38 chr10 94712495 94713064 -50876224 - HAL1 LINE L1 -478 2029 1346 211 163 0 41 chr10 94713066 94713115 -50876173 + T-rich Low_complexity Low_complexity 2 48 0 1034 144 11 17 chr10 94713120 94713294 -50875994 - AluSg/x SINE Alu -7 303 131 233 0 62 0 chr10 94713294 94713326 -50875962 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2101 105 7 7 chr10 94713326 94713611 -50875677 - AluSx SINE Alu -27 285 1 555 281 99 0 chr10 94713612 94713833 -50875455 - HAL1 LINE L1 -1153 1354 1112 1074 195 127 8 chr10 94713883 94714119 -50875169 - AluJo SINE Alu -26 286 23 23 0 0 0 chr10 94714173 94714196 -50875092 + AT_rich Low_complexity Low_complexity 1 23 0 1812 262 105 27 chr10 94714214 94714985 -50874303 - HAL1 LINE L1 -1534 973 143 1626 197 14 0 chr10 94715009 94715304 -50873984 + AluJb SINE Alu 1 299 -13 4911 162 27 15 chr10 94715431 94716406 -50872882 - L1MB5 LINE L1 -9 6165 5185 1911 146 4 0 chr10 94716714 94717025 -50872263 + AluJb SINE Alu 2 313 0 255 285 80 100 chr10 94717095 94717344 -50871944 - MIR SINE MIR -14 248 5 36 0 0 0 chr10 94717391 94717427 -50871861 + AT_rich Low_complexity Low_complexity 1 36 0 620 262 142 26 chr10 94718114 94718381 -50870907 - L2 LINE L2 -47 3266 2969 601 291 44 62 chr10 94718381 94718786 -50870502 + L1MCc LINE L1 17 414 -6009 6728 145 44 79 chr10 94719248 94719714 -50869574 - L1MC3 LINE L1 0 7785 7304 1774 163 3 29 chr10 94719714 94720020 -50869268 - AluJo SINE Alu -13 299 2 6728 145 44 79 chr10 94720020 94720988 -50868300 - L1MC3 LINE L1 -481 7304 6401 1007 287 18 43 chr10 94721111 94721572 -50867716 + L1MCc LINE L1 1129 1586 -4887 237 178 0 0 chr10 94721587 94721632 -50867656 + GA-rich Low_complexity Low_complexity 3 47 0 822 234 88 65 chr10 94721632 94722064 -50867224 + L1MCc LINE L1 1760 2201 -4921 450 125 0 42 chr10 94722172 94722244 -50867044 + FLAM_A SINE Alu 63 131 -11 2243 96 20 7 chr10 94722246 94722549 -50866739 + AluSc SINE Alu 3 309 0 610 232 100 19 chr10 94722559 94722922 -50866366 + L1MCc LINE L1 2271 2782 -4159 1828 251 128 46 chr10 94722937 94723767 -50865521 + L1MEc LINE L1 475 1372 -5453 1445 141 15 0 chr10 94723847 94724053 -50865235 + AluSg/x SINE Alu 82 290 -22 806 230 19 49 chr10 94724055 94724355 -50864933 + L1MEc LINE L1 1371 1590 -4952 1995 151 6 6 chr10 94724358 94724670 -50864618 + AluSx SINE Alu 1 312 0 683 177 115 0 chr10 94724683 94724796 -50864492 + FLAM_C SINE Alu 8 133 -10 338 314 17 0 chr10 94724797 94724915 -50864373 + L1MEc LINE L1 1583 1702 -4840 1349 163 87 73 chr10 94724918 94725218 -50864070 + AluJb SINE Alu 2 305 -7 1669 165 14 18 chr10 94725218 94725503 -50863785 + AluJb SINE Alu 1 284 -28 1503 119 53 9 chr10 94725558 94725784 -50863504 - AluSq SINE Alu -12 301 66 1053 168 37 66 chr10 94725784 94725968 -50863320 + L1MA6 LINE L1 6063 6240 -60 2299 112 0 0 chr10 94725968 94726264 -50863024 + AluSx SINE Alu 1 296 -16 1053 168 37 66 chr10 94726264 94726323 -50862965 + L1MA6 LINE L1 6240 6299 -1 22 0 0 0 chr10 94726354 94726376 -50862912 + AT_rich Low_complexity Low_complexity 1 22 0 669 282 5 19 chr10 94726726 94726932 -50862356 - L2 LINE L2 -707 2607 2405 208 246 0 0 chr10 94726974 94727031 -50862257 + T-rich Low_complexity Low_complexity 1 57 0 1755 173 3 37 chr10 94727135 94727458 -50861830 - AluJb SINE Alu 0 312 1 350 294 71 8 chr10 94727940 94728066 -50861222 + MER94 DNA DNA 1 134 0 2268 106 3 3 chr10 94728071 94728382 -50860906 - AluY SINE Alu 0 311 1 2572 54 0 13 chr10 94728836 94729149 -50860139 - AluY SINE Alu -2 309 1 2203 56 0 4 chr10 94729154 94729421 -50859867 - AluY SINE Alu -6 305 40 233 297 0 14 chr10 94729629 94729703 -50859585 - MIR SINE MIR -184 78 6 732 162 0 9 chr10 94730411 94730522 -50858766 - MER30 DNA MER1_type -1 229 120 1179 113 0 0 chr10 94730522 94730681 -50858607 - AluSg/x SINE Alu -21 289 131 1006 184 0 0 chr10 94730839 94731007 -50858281 - FRAM SINE Alu -10 166 1 334 316 112 24 chr10 94731059 94731265 -50858023 + L2 LINE L2 1812 2035 -1279 250 292 241 7 chr10 94731313 94731450 -50857838 - L2 LINE L2 -2 3270 3102 1956 121 61 0 chr10 94731451 94731731 -50857557 + AluSx SINE Alu 1 297 -15 210 294 70 7 chr10 94732247 94732390 -50856898 + L2 LINE L2 2140 2291 -1023 2382 106 3 0 chr10 94732515 94732826 -50856462 - AluSp SINE Alu 0 313 2 768 122 16 8 chr10 94732885 94733008 -50856280 + MER30 DNA MER1_type 1 124 -106 1109 80 0 7 chr10 94733008 94733146 -50856142 + AluSq/x SINE Alu 1 137 -175 231 322 0 0 chr10 94733326 94733416 -50855872 + L1MC4 LINE L1 6614 6703 -1339 * 280 229 48 0 chr10 94733338 94733421 -50855867 - L1MC4 LINE L1 -1339 6703 6617 2272 104 0 0 chr10 94733421 94733709 -50855579 - AluSx SINE Alu -24 288 1 1175 268 32 0 chr10 94733710 94734023 -50855265 - L1M4 LINE L1 -2387 3759 3437 479 287 48 88 chr10 94734206 94734582 -50854706 + HAL1 LINE L1 339 699 -1808 * 8976 169 35 9 chr10 94734571 94737420 -50851868 + L1MA3 LINE L1 3379 6305 0 349 233 57 85 chr10 94737417 94737593 -50851695 + HAL1 LINE L1 689 859 -1648 * 3604 191 24 40 chr10 94737577 94738377 -50850911 + L1MB3 LINE L1 5396 6182 -1 230 254 132 58 chr10 94738384 94738571 -50850717 + HAL1 LINE L1 828 1000 -1507 2726 35 0 3 chr10 94738571 94738883 -50850405 + AluY SINE Alu 1 311 0 230 254 132 58 chr10 94738883 94739221 -50850067 + HAL1 LINE L1 1000 1465 -1042 6284 41 16 1 chr10 94739655 94740419 -50848869 + L1PA5 LINE L1 5378 6152 -2 376 302 43 36 chr10 94741294 94741433 -50847855 + MIR3 SINE MIR 20 159 -49 2375 110 0 0 chr10 94741987 94742297 -50846991 + AluSg SINE Alu 1 310 0 1167 70 76 5 chr10 94743212 94743397 -50845891 + PABL_B LTR ERV1 249 446 -221 * 1853 114 46 10 chr10 94743396 94743703 -50845585 - THE1C LTR MaLR -57 318 1 1008 215 6 0 chr10 94743764 94743941 -50845347 + MER45A DNA AcHobo 1 178 0 1643 119 0 0 chr10 94744790 94745009 -50844279 + AluSg/x SINE Alu 85 303 -9 816 157 0 8 chr10 94745221 94745342 -50843946 - AluJb SINE Alu -192 120 1 1859 218 64 64 chr10 94745368 94745987 -50843301 - L1MC4a LINE L1 -1210 6598 5980 1941 160 21 0 chr10 94745987 94746275 -50843013 - AluSx SINE Alu -18 294 1 1859 218 64 64 chr10 94746275 94746311 -50842977 - L1MC4a LINE L1 -1828 5980 5945 2348 113 0 0 chr10 94746311 94746620 -50842668 - AluSg SINE Alu -1 309 1 1859 218 64 64 chr10 94746620 94746697 -50842591 - L1MC4a LINE L1 -1862 5946 5865 306 236 67 85 chr10 94746950 94747115 -50842173 + L1MCa LINE L1 1143 1304 -5122 935 126 19 73 chr10 94747115 94747136 -50842152 + L1M4 LINE L1 5459 5480 -698 1187 160 0 0 chr10 94747136 94747311 -50841977 + FAM SINE Alu 1 175 0 935 126 19 73 chr10 94747311 94747411 -50841877 + L1M4 LINE L1 5480 5584 -594 2142 131 3 13 chr10 94747411 94747724 -50841564 + AluSg SINE Alu 1 310 0 935 126 19 73 chr10 94747724 94747836 -50841452 + L1M4 LINE L1 5584 5691 -487 537 165 0 0 chr10 94747837 94747934 -50841354 + (CA)n Simple_repeat Simple_repeat 2 98 0 1954 148 7 3 chr10 94747941 94748232 -50841056 - AluJo SINE Alu -16 296 5 1845 142 10 43 chr10 94748396 94748698 -50840590 + AluJo SINE Alu 3 294 -18 756 154 15 8 chr10 94748713 94748843 -50840445 + AluJo SINE Alu 6 136 -176 383 265 72 36 chr10 94748897 94749063 -50840225 + HAL1b LINE L1 431 602 -746 22 35 0 0 chr10 94749063 94749092 -50840196 + AT_rich Low_complexity Low_complexity 1 29 0 1992 112 0 47 chr10 94749138 94749485 -50839803 + AluSx SINE Alu 1 333 0 339 298 107 71 chr10 94749582 94749599 -50839689 + HAL1b LINE L1 598 613 -735 2163 130 0 0 chr10 94749599 94749891 -50839397 + AluSq SINE Alu 1 292 -21 225 0 0 0 chr10 94749891 94749916 -50839372 + (GA)n Simple_repeat Simple_repeat 2 26 0 339 298 107 71 chr10 94749916 94750149 -50839139 + HAL1b LINE L1 612 858 -490 2486 139 21 104 chr10 94750591 94750834 -50838454 + LTR26B LTR ERV1 1 263 -268 2131 115 13 19 chr10 94750834 94751148 -50838140 - AluSx SINE Alu 0 312 1 2486 139 21 104 chr10 94751148 94751478 -50837810 + LTR26B LTR ERV1 263 526 -5 261 0 0 0 chr10 94751910 94751939 -50837349 + (TG)n Simple_repeat Simple_repeat 2 30 0 764 113 7 71 chr10 94752259 94752400 -50836888 - FLAM_C SINE Alu -1 132 1 21 57 0 0 chr10 94753452 94753487 -50835801 + GC_rich Low_complexity Low_complexity 1 35 0 421 257 88 20 chr10 94756677 94756825 -50832463 - MIR SINE MIR -14 248 91 450 0 0 0 chr10 94757587 94757637 -50831651 + (CA)n Simple_repeat Simple_repeat 2 51 0 1258 125 22 0 chr10 94758354 94758538 -50830750 - AluSp SINE Alu -3 310 123 1218 236 114 20 chr10 94758564 94758966 -50830322 + LTR48B LTR ERV1 1 440 -204 639 170 102 0 chr10 94758974 94759121 -50830167 + LTR49 LTR ERV1 434 595 0 256 16 47 172 chr10 94759134 94759167 -50830121 + Tigger7 DNA MER2_type 63 86 -2401 2303 106 7 0 chr10 94759167 94759468 -50829820 + AluSx SINE Alu 1 303 -9 256 16 47 172 chr10 94759468 94759498 -50829790 + Tigger7 DNA MER2_type 86 118 -2369 * 768 160 87 48 chr10 94759491 94759697 -50829591 + Tigger7 DNA MER2_type 2271 2484 -7 280 255 94 47 chr10 94760780 94760886 -50828402 + MIR SINE MIR 152 262 0 189 0 0 0 chr10 94763325 94763346 -50825942 + (ATG)n Simple_repeat Simple_repeat 1 21 0 334 282 68 0 chr10 94763413 94763530 -50825758 - MIR SINE MIR -79 183 59 377 251 222 18 chr10 94763790 94763957 -50825331 + MIR SINE MIR 25 225 -37 302 301 11 0 chr10 94764044 94764137 -50825151 + (CA)n Simple_repeat Simple_repeat 1 94 0 180 0 0 0 chr10 94766271 94766291 -50822997 + (GGGA)n Simple_repeat Simple_repeat 1 20 0 606 234 44 0 chr10 94766658 94766795 -50822493 + L1M4 LINE L1 3567 3709 -2437 * 706 181 52 42 chr10 94766773 94766966 -50822322 + L1M4 LINE L1 4368 4562 -1584 1392 215 37 11 chr10 94766966 94767236 -50822052 + AluJb SINE Alu 1 277 -35 393 176 0 93 chr10 94767252 94767360 -50821928 + L1M4 LINE L1 4549 4646 -1500 1599 186 29 48 chr10 94768116 94768428 -50820860 - AluJo SINE Alu -6 306 1 2297 99 10 19 chr10 94768582 94768894 -50820394 - AluY SINE Alu -1 310 2 1982 137 46 0 chr10 94769193 94769477 -50819811 + AluSx SINE Alu 1 297 -15 234 281 242 16 chr10 94769682 94769810 -50819478 - MIR SINE MIR -56 206 50 25 31 0 0 chr10 94769848 94769880 -50819408 + AT_rich Low_complexity Low_complexity 1 32 0 1108 135 39 0 chr10 94770086 94770242 -50819046 - AluSg/x SINE Alu -18 294 133 212 270 0 34 chr10 94770341 94770430 -50818858 + A-rich Low_complexity Low_complexity 4 89 0 2117 128 26 0 chr10 94770614 94770918 -50818370 + AluSx SINE Alu 1 312 0 1456 160 9 0 chr10 94772004 94772217 -50817071 - AluJb SINE Alu -30 282 68 5814 72 18 49 chr10 94772323 94773374 -50815914 + SVA Other Other 16 868 -518 6670 63 19 49 chr10 94773385 94774367 -50814921 + SVA Other Other 433 1385 -1 1767 141 108 0 chr10 94775362 94775639 -50813649 + AluSx SINE Alu 1 307 -5 725 165 28 0 chr10 94776111 94776220 -50813068 + FLAM_C SINE Alu 6 117 -26 249 33 0 0 chr10 94776220 94776250 -50813038 + (CA)n Simple_repeat Simple_repeat 2 31 0 2282 106 3 13 chr10 94777466 94777778 -50811510 + AluSx SINE Alu 1 309 -3 21 0 0 0 chr10 94777991 94778012 -50811276 + AT_rich Low_complexity Low_complexity 1 21 0 249 324 36 43 chr10 94778677 94778816 -50810472 + L2 LINE L2 2399 2536 -778 2465 57 9 28 chr10 94778945 94779262 -50810026 + AluY SINE Alu 1 311 0 2156 243 93 46 chr10 94779277 94780031 -50809257 - MER21B LTR ERV1 -58 805 17 2143 126 0 0 chr10 94780203 94780522 -50808766 + AluSp SINE Alu 2 320 0 403 253 37 143 chr10 94781674 94781947 -50807341 + MIR SINE MIR 11 254 -8 674 210 8 0 chr10 94787532 94787656 -50801632 - FLAM_C SINE Alu -17 126 2 850 269 90 19 chr10 94788628 94788940 -50800348 + L2 LINE L2 2976 3309 -4 585 161 32 16 chr10 94789080 94789204 -50800084 + L1MA7 LINE L1 5989 6114 -177 786 203 15 0 chr10 94789205 94789338 -50799950 + AluJo SINE Alu 2 136 -176 601 189 37 63 chr10 94789339 94789530 -50799758 + L1MA7 LINE L1 6106 6291 0 946 193 5 5 chr10 94789619 94789811 -50799477 + AluJo SINE Alu 120 311 -1 1177 177 23 9 chr10 94990393 94990608 -50598680 - AluJo SINE Alu -6 306 89 936 146 12 0 chr10 94990615 94990779 -50598509 + MSTB1 LTR MaLR 23 188 -244 604 154 0 0 chr10 94990797 94990888 -50598400 - AluJo SINE Alu -221 91 1 1518 141 12 0 chr10 94990889 94991131 -50598157 + MSTB1 LTR MaLR 175 419 -13 1861 155 30 33 chr10 94991148 94991541 -50597747 - L1MB4 LINE L1 -32 6148 5757 872 153 0 0 chr10 94991551 94991682 -50597606 - AluSq/x SINE Alu -182 131 1 7369 211 46 42 chr10 94991682 94991806 -50597482 - L1MB4 LINE L1 -405 5769 5647 2205 146 53 15 chr10 94991806 94992218 -50597070 - MSTA LTR MaLR 0 428 1 7369 211 46 42 chr10 94992218 94992575 -50596713 - L1MB4 LINE L1 -527 5647 5293 285 119 0 0 chr10 94992575 94992617 -50596671 - MSTA LTR MaLR 0 428 387 7369 211 46 42 chr10 94992617 94994737 -50594551 - L1MB4 LINE L1 -881 5293 3118 2332 147 50 12 chr10 94995140 94995556 -50593732 + MSTB1 LTR MaLR 1 432 0 556 288 82 16 chr10 94996072 94996315 -50592973 - MLT1L LTR MaLR -33 582 324 468 339 31 39 chr10 94996611 94996871 -50592417 + L2 LINE L2 719 976 -2338 694 251 101 16 chr10 94996881 94997128 -50592160 - MLT1L LTR MaLR -337 278 11 311 348 12 37 chr10 94997267 94997431 -50591857 + MIR SINE MIR 49 208 -54 901 165 0 49 chr10 94998031 94998195 -50591093 + AluSc SINE Alu 128 283 -26 2557 45 0 10 chr10 94998682 94998990 -50590298 + AluY SINE Alu 1 305 -6 500 312 55 15 chr10 94999707 94999906 -50589382 - MIR SINE MIR -37 225 19 2308 107 0 7 chr10 95000067 95000367 -50588921 - AluSq SINE Alu -15 298 1 386 363 84 16 chr10 95000673 95000993 -50588295 + L2 LINE L2 1286 1627 -1687 362 197 263 36 chr10 95001503 95001640 -50587648 - MIR SINE MIR -82 180 13 254 294 10 49 chr10 95002982 95003084 -50586204 - MER5A DNA MER1_type -89 100 3 306 256 122 79 chr10 95003436 95003690 -50585598 + L1M2 LINE L1 702 966 -5883 218 299 52 41 chr10 95004395 95004492 -50584796 - L2 LINE L2 0 3313 3216 256 297 0 0 chr10 95004866 95004930 -50584358 - MIR3 SINE MIR -33 175 112 595 303 138 9 chr10 95005028 95005259 -50584029 - MIR SINE MIR 0 262 2 21 0 0 0 chr10 95006369 95006390 -50582898 + AT_rich Low_complexity Low_complexity 1 21 0 440 195 168 26 chr10 95007685 95007798 -50581490 + MER94 DNA DNA 3 131 -3 245 216 0 0 chr10 95008048 95008099 -50581189 - MER5B DNA MER1_type -7 171 121 841 286 27 31 chr10 95008629 95008888 -50580400 + MIR SINE MIR 2 259 -3 310 282 146 9 chr10 95009136 95009246 -50580042 - L1MC/D LINE L1 -2042 5766 5642 890 150 7 0 chr10 95009254 95009394 -50579894 + AluJb SINE Alu 1 141 -171 689 278 95 26 chr10 95009426 95009814 -50579474 - L1MC/D LINE L1 -451 5670 5256 367 310 111 5 chr10 95009851 95010067 -50579221 - L1MC/D LINE L1 -892 5254 5016 265 265 245 26 chr10 95010190 95010341 -50578947 - MIR3 SINE MIR -20 188 5 203 308 8 34 chr10 95011024 95011141 -50578147 + CT-rich Low_complexity Low_complexity 2 115 0 757 126 25 0 chr10 95011373 95011492 -50577796 + FRAM SINE Alu 46 167 -9 339 328 162 15 chr10 95011504 95011708 -50577580 - L3 LINE CR1 -193 1384 1151 21 0 0 0 chr10 95011890 95011911 -50577377 + AT_rich Low_complexity Low_complexity 1 21 0 263 320 64 16 chr10 95012142 95012267 -50577021 - MIR3 SINE MIR -10 198 68 1521 193 104 89 chr10 95012295 95012375 -50576913 - L1MC4 LINE L1 -48 7994 7917 1826 194 111 40 chr10 95012375 95012844 -50576444 - MLT1D LTR MaLR 0 505 4 1521 193 104 89 chr10 95012844 95013367 -50575921 - L1MC4 LINE L1 -125 7917 7377 2125 121 0 0 chr10 95013367 95013656 -50575632 - AluSx SINE Alu -23 289 1 1521 193 104 89 chr10 95013656 95013735 -50575553 - L1MC4 LINE L1 -665 7377 7301 2352 113 0 0 chr10 95013745 95014055 -50575233 + AluSx SINE Alu 1 310 -2 489 226 59 21 chr10 95014268 95014454 -50574834 + L1MC5 LINE L1 7720 7912 -49 2382 92 0 0 chr10 95014463 95014769 -50574519 - AluSx SINE Alu -6 306 1 258 301 72 12 chr10 95014848 95014931 -50574357 - L2 LINE L2 -9 3263 3176 403 198 25 0 chr10 95015015 95015096 -50574192 - Tigger5 DNA MER2_type 0 2323 2241 297 218 0 0 chr10 95015091 95015146 -50574142 + Tigger5 DNA MER2_type 2264 2318 -5 * 410 211 0 0 chr10 95015148 95015224 -50574064 - Tigger5 DNA MER2_type -2245 78 3 292 204 28 65 chr10 95015529 95015637 -50573651 - L1PA13 LINE L1 -216 5954 5851 1136 114 0 0 chr10 95015638 95015813 -50573475 + L1PA13 LINE L1 5928 6102 -61 356 245 90 19 chr10 95016018 95016173 -50573115 + L1ME1 LINE L1 5996 6161 -5 551 267 59 0 chr10 95016192 95016379 -50572909 - L1ME3A LINE L1 -318 5852 5655 1450 131 0 0 chr10 95016404 95016602 -50572686 - AluSq SINE Alu -115 198 1 2446 71 0 0 chr10 95016602 95016899 -50572389 - AluY SINE Alu -14 297 1 21 0 0 0 chr10 95016900 95016921 -50572367 + AT_rich Low_complexity Low_complexity 1 21 0 2845 142 84 16 chr10 95017094 95017845 -50571443 - MER21A LTR ERV1 -6 925 1 2111 183 34 11 chr10 95017845 95018283 -50571005 - MER21A-int LTR ERV1 0 4191 3744 198 0 0 0 chr10 95018698 95018720 -50570568 + (TG)n Simple_repeat Simple_repeat 2 23 0 686 250 83 44 chr10 95018725 95019123 -50570165 - L1MC4a LINE L1 -246 5924 5500 24 67 0 0 chr10 95019630 95019675 -50569613 + AT_rich Low_complexity Low_complexity 1 45 0 23 0 0 0 chr10 95019911 95019934 -50569354 + AT_rich Low_complexity Low_complexity 1 23 0 447 274 91 19 chr10 95020196 95020404 -50568884 - L1ME3A LINE L1 -251 5919 5697 593 172 0 0 chr10 95020532 95020625 -50568663 - AluJ/FLAM SINE Alu -219 93 1 286 244 82 30 chr10 95020631 95020766 -50568522 + L1ME1 LINE L1 6021 6162 -4 1833 157 30 47 chr10 95021030 95021063 -50568225 - L1MB7 LINE L1 0 6184 6152 13452 117 47 60 chr10 95021063 95021991 -50567297 - Tigger1 DNA MER2_type -1 2417 1478 2079 60 4 34 chr10 95021991 95022260 -50567028 - AluY SINE Alu -12 299 39 13452 117 47 60 chr10 95022260 95023780 -50565508 - Tigger1 DNA MER2_type -940 1478 1 1833 157 30 47 chr10 95023780 95024172 -50565116 - L1MB7 LINE L1 -32 6152 5766 7672 52 40 0 chr10 95024180 95025950 -50563338 - L1PA5 LINE L1 0 6154 4353 28156 75 25 3 chr10 95025950 95029953 -50559335 - L1PA5 LINE L1 -2033 4113 26 1666 147 112 0 chr10 95030263 95030576 -50558712 + MER46B DNA MER2_type 13 235 -1 205 288 68 14 chr10 95030583 95030656 -50558632 + MIR SINE MIR 157 233 -29 432 229 6 0 chr10 95031439 95031538 -50557750 - L1MC1 LINE L1 -9 6335 6228 2241 103 0 31 chr10 95032683 95033003 -50556285 - AluSx SINE Alu -2 310 1 199 325 48 0 chr10 95033005 95033088 -50556200 + L2 LINE L2 2210 2296 -1018 376 352 63 7 chr10 95033371 95033513 -50555775 + L3 LINE CR1 1377 1526 -51 416 352 71 28 chr10 95033548 95033801 -50555487 - L2 LINE L2 -1 3271 3008 1849 141 0 3 chr10 95034286 95034590 -50554698 + AluJb SINE Alu 1 303 0 641 155 74 14 chr10 95035040 95035055 -50554233 - L1MA10 LINE L1 -2 6332 6318 2494 208 133 19 chr10 95035055 95035575 -50553713 - L1ME1 LINE L1 -8 6158 5699 2214 129 0 0 chr10 95035575 95035877 -50553411 - AluSx SINE Alu -10 302 1 2494 208 133 19 chr10 95035877 95036148 -50553140 - L1ME1 LINE L1 -467 5699 5460 354 23 0 0 chr10 95036148 95036191 -50553097 + (TG)n Simple_repeat Simple_repeat 2 44 0 2494 208 133 19 chr10 95036191 95036263 -50553025 - L1ME1 LINE L1 -706 5460 5198 23 0 0 0 chr10 95036264 95036287 -50553001 + AT_rich Low_complexity Low_complexity 1 23 0 289 238 71 32 chr10 95036287 95036413 -50552875 - L1MEc LINE L1 -5762 634 504 1042 188 0 0 chr10 95036413 95036578 -50552710 - AluJb SINE Alu -15 297 133 352 175 144 0 chr10 95036622 95036719 -50552569 - FLAM_A SINE Alu -1 132 22 948 238 147 10 chr10 95036782 95037169 -50552119 - L1MEc LINE L1 -5918 478 39 1839 155 16 13 chr10 95038506 95038810 -50550478 - AluJo SINE Alu -7 305 1 286 108 31 0 chr10 95039069 95039134 -50550154 + CT-rich Low_complexity Low_complexity 2 68 0 279 0 0 0 chr10 95039136 95039167 -50550121 + (CA)n Simple_repeat Simple_repeat 1 31 0 327 152 61 0 chr10 95040133 95040199 -50549089 - MER21A LTR ERV1 0 931 862 2295 159 54 10 chr10 95040204 95040612 -50548676 - MSTB LTR MaLR 0 426 1 1605 139 39 32 chr10 95040618 95040928 -50548360 - MSTB-int LTR MaLR -6 1645 1334 1596 190 37 3 chr10 95040940 95041240 -50548048 - AluJb SINE Alu -2 310 1 1144 115 45 10 chr10 95041271 95041471 -50547817 + MSTA LTR MaLR 222 428 0 1719 190 23 8 chr10 95041471 95042011 -50547277 + MSTA-int LTR MaLR 3 598 -1050 1423 175 4 8 chr10 95042011 95042251 -50547037 + AluJb SINE Alu 1 239 -73 22 0 0 0 chr10 95042342 95042364 -50546924 + AT_rich Low_complexity Low_complexity 1 22 0 1264 124 55 0 chr10 95042384 95042586 -50546702 - MSTB LTR MaLR -213 213 1 3363 168 122 26 chr10 95042586 95043317 -50545971 - MER21B LTR ERV1 -60 803 3 306 291 0 23 chr10 95044375 95044461 -50544827 - MER117 DNA MER1_type -86 111 28 2205 160 5 66 chr10 95044603 95045122 -50544166 - MER41B LTR ERV1 -20 615 132 1746 181 0 19 chr10 95045285 95045594 -50543694 + AluJb SINE Alu 1 303 -9 1390 207 15 8 chr10 95045760 95046026 -50543262 - AluSx SINE Alu -20 292 25 197 234 169 0 chr10 95046353 95046430 -50542858 + MIR SINE MIR 24 113 -95 202 277 108 0 chr10 95046628 95046711 -50542577 - L3 LINE CR1 -1302 275 184 34 0 0 0 chr10 95047289 95047323 -50541965 + AT_rich Low_complexity Low_complexity 1 34 0 583 268 58 0 chr10 95048081 95048271 -50541017 + MER33 DNA MER1_type 1 201 -123 560 260 28 78 chr10 95048600 95048919 -50540369 - MER102b DNA MER1_type -12 329 27 23 33 0 0 chr10 95049962 95049992 -50539296 + AT_rich Low_complexity Low_complexity 1 30 0 3557 50 0 2 chr10 95052131 95052570 -50536718 - L1PA5 LINE L1 -1 6153 5716 1574 165 62 17 chr10 95055928 95056219 -50533069 - AluJo SINE Alu -8 304 1 1840 160 13 22 chr10 95056660 95056972 -50532316 - AluJo SINE Alu 0 312 4 5587 101 27 14 chr10 95057672 95058531 -50530757 + MER4D LTR ERV1 1 870 -2 295 248 99 0 chr10 95058762 95058863 -50530425 - MIR SINE MIR -34 228 118 2176 125 3 10 chr10 95058975 95059280 -50530008 - AluSx SINE Alu -9 303 1 2375 162 114 9 chr10 95061201 95061658 -50527630 + LTR10B LTR ERV1 1 505 0 441 155 155 10 chr10 95061721 95061818 -50527470 - HY1 scRNA scRNA -1 111 1 685 215 0 0 chr10 95061847 95061977 -50527311 - FLAM_A SINE Alu 0 133 4 444 156 0 92 chr10 95062092 95062201 -50527087 - L1M LINE L1 -785 5381 5300 12524 197 45 68 chr10 95062207 95065055 -50524233 + L1MA4A LINE L1 15 2927 -4078 841 192 0 70 chr10 95065055 95065179 -50524109 + FRAM SINE Alu 1 132 -180 2083 180 75 5 chr10 95065179 95065579 -50523709 + MSTA LTR MaLR 1 428 0 9375 171 13 6 chr10 95065579 95067218 -50522070 + MSTA-int LTR MaLR 1 1651 0 2024 168 72 22 chr10 95067220 95067624 -50521664 + MSTA LTR MaLR 3 426 -2 841 192 0 70 chr10 95067624 95067667 -50521621 + FRAM SINE Alu 132 160 -16 12524 197 45 68 chr10 95067667 95070698 -50518590 + L1MA4A LINE L1 2927 6198 -807 2253 113 0 0 chr10 95070698 95070989 -50518299 + AluSg SINE Alu 1 291 -19 12524 197 45 68 chr10 95070989 95071779 -50517509 + L1MA4A LINE L1 6198 7005 0 349 191 48 0 chr10 95071789 95071894 -50517394 - L1M4 LINE L1 -843 5303 5194 * 1801 243 44 18 chr10 95071878 95072475 -50516813 - L1ME3A LINE L1 -280 5873 5262 239 232 24 93 chr10 95072569 95072837 -50516451 - L1ME3A LINE L1 -4903 1216 979 21 0 0 0 chr10 95073045 95073066 -50516222 + AT_rich Low_complexity Low_complexity 1 21 0 1673 73 0 4 chr10 95073067 95073300 -50515988 - L1MA2 LINE L1 -1 6303 6072 6981 147 17 11 chr10 95073300 95074623 -50514665 - L1M4 LINE L1 -1278 4868 3537 1623 199 87 115 chr10 95074623 95075335 -50513953 + LTR1B LTR ERV1 55 746 -80 247 178 0 22 chr10 95075843 95075888 -50513400 + L2 LINE L2 3250 3293 -20 2159 118 7 0 chr10 95075935 95076223 -50513065 + AluSg SINE Alu 1 290 -20 1835 151 24 15 chr10 95076240 95076321 -50512967 - MER2 DNA MER2_type -1 343 264 1659 191 3 20 chr10 95076321 95076619 -50512669 + AluJo SINE Alu 1 293 -19 1835 151 24 15 chr10 95076619 95076875 -50512413 - MER2 DNA MER2_type -80 264 3 625 265 93 9 chr10 95077603 95077818 -50511470 - MIR SINE MIR -22 240 8 2871 122 2 4 chr10 95078909 95079360 -50509928 - L1PA16 LINE L1 -296 5870 5421 238 141 0 125 chr10 95079360 95079424 -50509864 + MER53 DNA DNA 62 117 -72 2320 109 26 113 chr10 95079757 95080133 -50509155 - MSTC LTR MaLR 0 428 99 1953 149 17 3 chr10 95080133 95080428 -50508860 - AluJb SINE Alu -13 299 1 2320 109 26 113 chr10 95080428 95080520 -50508768 - MSTC LTR MaLR -329 99 1 374 284 103 0 chr10 95080853 95080969 -50508319 + L2 LINE L2 3186 3313 0 616 276 138 26 chr10 95081197 95081465 -50507823 + L2 LINE L2 3016 3313 0 2106 226 45 23 chr10 95081898 95082460 -50506828 + L1MC4a LINE L1 5366 5939 -1869 189 0 0 0 chr10 95082465 95082486 -50506802 + (TA)n Simple_repeat Simple_repeat 2 22 0 32 0 0 0 chr10 95082570 95082602 -50506686 + AT_rich Low_complexity Low_complexity 1 32 0 3667 96 19 9 chr10 95082602 95083133 -50506155 - L1PA11 LINE L1 -4 6170 5635 1643 175 7 10 chr10 95083133 95083430 -50505858 - AluJb SINE Alu -16 296 1 373 294 59 35 chr10 95083434 95083604 -50505684 + L1MC4a LINE L1 6098 6271 -1537 1161 214 107 3 chr10 95083844 95084220 -50505068 + L1MC4 LINE L1 6563 6916 -892 279 222 61 10 chr10 95084293 95084392 -50504896 + L1MC5 LINE L1 6957 7060 -901 334 261 67 22 chr10 95084410 95084544 -50504744 + MLT1J LTR MaLR 372 511 0 2377 151 80 9 chr10 95084599 95085064 -50504224 - LTR44 LTR ERV1 -3 516 19 700 146 0 9 chr10 95085580 95085690 -50503598 - FLAM_C SINE Alu -10 133 25 1538 237 43 39 chr10 95085789 95086274 -50503014 + MLT1D LTR MaLR 18 504 -1 360 310 81 73 chr10 95086551 95087043 -50502245 - HAL1b LINE L1 -944 1399 88 1266 223 132 0 chr10 95087905 95088277 -50501011 - LTR16A LTR ERVL -5 445 25 261 244 12 131 chr10 95089064 95089075 -50500213 - Charlie8 DNA MER1_type -2269 148 137 3656 73 4 4 chr10 95089075 95089566 -50499722 - L1PA7 LINE L1 -6 6148 5658 261 244 12 131 chr10 95089566 95089722 -50499566 - Charlie8 DNA MER1_type -2280 137 1 1016 144 74 59 chr10 95090369 95090625 -50498663 + L1MB5 LINE L1 5383 5642 -542 345 172 0 0 chr10 95090626 95090690 -50498598 + (TG)n Simple_repeat Simple_repeat 2 65 0 344 261 0 22 chr10 95090694 95090786 -50498502 + L1MC4 LINE L1 6614 6703 -1339 1009 186 18 9 chr10 95090793 95091019 -50498269 + L1MB5 LINE L1 5643 5870 -304 382 297 40 7 chr10 95091026 95091174 -50498114 - HAL1 LINE L1 -1216 1291 1139 1979 155 3 7 chr10 95091529 95091833 -50497455 - AluSx SINE Alu -9 303 1 1836 215 81 66 chr10 95093851 95094382 -50494906 - MLT1H LTR MaLR -8 541 3 26 0 0 0 chr10 95094544 95094570 -50494718 + AT_rich Low_complexity Low_complexity 1 26 0 568 277 133 42 chr10 95095297 95095582 -50493706 - MLT1L LTR MaLR -88 527 217 787 232 17 11 chr10 95095747 95095924 -50493364 + MER45A DNA AcHobo 1 178 0 529 266 52 17 chr10 95096161 95096334 -50492954 + LTR16C LTR ERVL 299 477 -14 448 303 86 11 chr10 95096510 95096685 -50492603 - MIR SINE MIR -27 235 48 1732 169 0 30 chr10 95096840 95097141 -50492147 + AluJb SINE Alu 1 292 -20 931 203 11 6 chr10 95097785 95097967 -50491321 - AluJo SINE Alu -8 304 122 1593 187 0 17 chr10 95097993 95098287 -50491001 - AluJb SINE Alu -20 292 4 261 0 0 0 chr10 95098307 95098336 -50490952 + (TA)n Simple_repeat Simple_repeat 1 29 0 1748 163 10 3 chr10 95098336 95098625 -50490663 - AluJo SINE Alu -21 291 1 626 233 161 36 chr10 95098738 95099073 -50490215 - Charlie7 DNA MER1_type -1 2611 2235 4847 175 22 1 chr10 95099112 95100402 -50488886 - L1MB7 LINE L1 -77 6107 4790 1365 217 53 37 chr10 95100405 95100842 -50488446 - Charlie7 DNA MER1_type -373 2239 1796 2430 62 0 0 chr10 95100912 95101203 -50488085 + AluY SINE Alu 2 292 -19 3043 92 6 5 chr10 95101228 95101635 -50487653 + MLT2A1 LTR ERVL 1 524 -30 1501 206 4 0 chr10 95101706 95101982 -50487306 + AluJo SINE Alu 2 278 -34 206 32 32 0 chr10 95101985 95102016 -50487272 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 643 244 63 43 chr10 95102185 95102439 -50486849 - L1MEd LINE L1 -4866 1253 995 344 117 67 0 chr10 95102447 95102507 -50486781 + MER89 LTR ERV1 2 65 -494 787 165 23 0 chr10 95102600 95102733 -50486555 - FLAM_C SINE Alu 0 143 8 1202 217 33 23 chr10 95102741 95103040 -50486248 + MER89 LTR ERV1 249 550 -9 466 278 78 51 chr10 95103098 95103433 -50485855 - L1MEd LINE L1 -5184 935 592 1954 165 7 0 chr10 95105271 95105574 -50483714 - AluJo SINE Alu -7 305 1 452 267 33 0 chr10 95105927 95106047 -50483241 + MIR SINE MIR 122 245 -17 736 188 58 92 chr10 95106118 95106281 -50483007 + LTR37A LTR ERV1 41 195 -231 1081 111 25 6 chr10 95106281 95106443 -50482845 - L1PA15 LINE L1 0 6165 6001 736 188 58 92 chr10 95106443 95106519 -50482769 + LTR37A LTR ERV1 195 272 -154 414 162 14 0 chr10 95106567 95106641 -50482647 + L1MB8 LINE L1 6103 6177 -1 800 153 145 60 chr10 95107927 95108145 -50481143 + ORSL DNA AcHobo 1 244 -31 3836 103 48 0 chr10 95108145 95108648 -50480640 + MER1A DNA MER1_type 1 527 0 800 153 145 60 chr10 95108648 95108678 -50480610 + ORSL DNA AcHobo 244 270 -5 2304 102 0 3 chr10 95108718 95109022 -50480266 + AluSx SINE Alu 1 303 -9 2266 128 48 31 chr10 95109036 95109394 -50479894 + THE1B LTR MaLR 1 364 0 12214 100 11 3 chr10 95109394 95110961 -50478327 + THE1B-int LTR MaLR 1 1580 0 1646 156 89 73 chr10 95110961 95111266 -50478022 + THE1B LTR MaLR 1 314 -50 2101 106 46 0 chr10 95111266 95111548 -50477740 + AluSc SINE Alu 1 295 -14 1646 156 89 73 chr10 95111548 95111600 -50477688 + THE1B LTR MaLR 314 364 0 914 241 62 21 chr10 95111602 95111843 -50477445 + MIR SINE MIR 11 261 -1 1619 203 17 3 chr10 95111973 95112274 -50477014 + AluJb SINE Alu 2 306 -6 1347 327 148 23 chr10 95112399 95113022 -50476266 - L3 LINE CR1 -2 1575 1031 2167 171 118 0 chr10 95113022 95113403 -50475885 - MSTB LTR MaLR 0 426 1 1347 327 148 23 chr10 95113403 95113765 -50475523 - L3 LINE CR1 -546 1031 467 273 311 58 73 chr10 95113810 95113952 -50475336 - MER5A DNA MER1_type 0 189 38 1959 139 26 3 chr10 95113952 95114255 -50475033 + AluJb SINE Alu 1 310 -2 358 234 234 0 chr10 95114311 95114456 -50474832 + MER5A DNA MER1_type 10 188 -1 203 195 24 0 chr10 95114494 95114535 -50474753 + GA-rich Low_complexity Low_complexity 2 43 0 516 302 6 17 chr10 95114578 95114730 -50474558 + MIR SINE MIR 92 243 -19 2057 187 46 26 chr10 95114730 95115185 -50474103 + MLT1C LTR MaLR 1 464 -3 516 302 6 17 chr10 95115185 95115204 -50474084 + MIR SINE MIR 243 261 -1 268 331 72 28 chr10 95115354 95115535 -50473753 - L2 LINE L2 -167 3105 2917 251 232 196 54 chr10 95116173 95116285 -50473003 - L2 LINE L2 -1 3312 3185 1119 283 97 17 chr10 95116339 95116628 -50472660 - LTR33 LTR ERVL -9 512 169 2112 127 35 127 chr10 95116628 95117084 -50472204 + MLT2D LTR ERVL 1 414 0 1119 283 97 17 chr10 95117084 95117267 -50472021 - LTR33 LTR ERVL -352 169 2 324 337 65 84 chr10 95117405 95117835 -50471453 + L2 LINE L2 2827 3248 -24 878 154 0 0 chr10 95117859 95117982 -50471306 + AluJo SINE Alu 2 124 -178 749 129 9 9 chr10 95118006 95118171 -50471117 + AluJo SINE Alu 197 361 0 321 223 98 36 chr10 95119199 95119311 -50469977 + MLT1K LTR MaLR 468 586 -2 295 292 108 15 chr10 95119963 95120093 -50469195 + L1ME LINE L1 5602 5743 -378 1668 181 3 45 chr10 95120144 95120480 -50468808 - AluJb SINE Alu 0 326 3 23 33 0 0 chr10 95120488 95120518 -50468770 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr10 95120587 95120610 -50468678 + AT_rich Low_complexity Low_complexity 1 23 0 184 329 63 25 chr10 95120762 95120841 -50468447 + MIR3 SINE MIR 113 194 -14 419 291 113 48 chr10 95121019 95121477 -50467811 - MLT1K LTR MaLR -62 526 10 183 232 12 61 chr10 95121482 95121564 -50467724 + L2 LINE L2 3194 3271 -1 616 285 34 25 chr10 95122260 95122495 -50466793 - L1MC4a LINE L1 -1839 5969 5733 429 52 0 0 chr10 95122502 95122560 -50466728 + Alu SINE Alu 244 301 -9 2322 141 19 11 chr10 95122716 95123093 -50466195 + MER57A LTR ERV1 12 391 -12 3676 183 19 101 chr10 95123094 95124018 -50465270 + MER57A-int LTR ERV1 1 849 -6688 221 159 0 0 chr10 95124201 95124245 -50465043 + A-rich Low_complexity Low_complexity 1 44 0 379 121 0 0 chr10 95124299 95124357 -50464931 + MER34C LTR ERV1 155 212 -373 660 204 8 160 chr10 95124392 95124754 -50464534 + MER57A-int LTR ERV1 1093 1399 -3724 251 242 0 0 chr10 95124770 95124832 -50464456 + MER57A-int LTR ERV1 1508 1569 -217 682 164 0 191 chr10 95124846 95125102 -50464186 + MER57A-int LTR ERV1 3247 3453 -2878 1519 177 102 4 chr10 95125247 95125512 -50463776 - AluJo SINE Alu -21 291 1 7184 185 70 65 chr10 95125513 95126225 -50463063 + MER57A-int LTR ERV1 1725 2432 -4887 2020 142 34 0 chr10 95126225 95126521 -50462767 + AluSx SINE Alu 1 306 -6 7184 185 70 65 chr10 95126521 95127697 -50461591 + MER57A-int LTR ERV1 2432 3601 -3718 270 0 0 0 chr10 95127697 95127727 -50461561 + (CA)n Simple_repeat Simple_repeat 2 31 0 7184 185 70 65 chr10 95127727 95127942 -50461346 + MER57A-int LTR ERV1 3601 5821 -1498 7635 163 18 25 chr10 95128267 95128978 -50460310 + MER57A-int LTR ERV1 5825 6523 -1014 2186 85 48 10 chr10 95128978 95129272 -50460016 + AluSx SINE Alu 1 305 -7 7635 163 18 25 chr10 95129272 95129892 -50459396 + MER57A-int LTR ERV1 6523 7146 -391 710 117 22 66 chr10 95129892 95130029 -50459259 + LTR54B LTR ERV1 3 133 -365 593 146 0 0 chr10 95130029 95130118 -50459170 + MER57A-int LTR ERV1 7281 7369 -168 839 161 15 0 chr10 95130123 95130253 -50459035 + AluJb SINE Alu 2 133 -179 758 188 0 14 chr10 95130256 95130394 -50458894 + MER57A-int LTR ERV1 7383 7518 -19 2239 156 25 25 chr10 95130395 95130492 -50458796 + MER57A LTR ERV1 1 97 -306 2587 119 22 14 chr10 95130492 95130533 -50458755 - THE1B LTR MaLR 0 364 325 2196 72 0 14 chr10 95130533 95130811 -50458477 + AluY SINE Alu 24 297 -14 2587 119 22 14 chr10 95130811 95131130 -50458158 - THE1B LTR MaLR -39 325 1 2239 156 25 25 chr10 95131130 95131435 -50457853 + MER57A LTR ERV1 96 403 0 419 250 87 0 chr10 95131484 95131588 -50457700 + MER81 DNA DNA 1 113 -1 4248 157 35 26 chr10 95132013 95132846 -50456442 + L1MB7 LINE L1 5336 6175 -9 2476 187 49 44 chr10 95133062 95133613 -50455675 - MLT2B3 LTR ERVL 0 554 1 22254 124 33 10 chr10 95133613 95136836 -50452452 - HERVL-B3 LTR ERVL 0 5654 2505 1801 111 25 0 chr10 95136836 95137080 -50452208 + AluSg SINE Alu 1 250 -60 22254 124 33 10 chr10 95137080 95137191 -50452097 - HERVL-B3 LTR ERVL -3149 2505 2398 5162 107 25 56 chr10 95137191 95137995 -50451293 - MER4E LTR ERV1 0 779 1 22254 124 33 10 chr10 95137995 95138945 -50450343 - HERVL-B3 LTR ERVL -3256 2398 36 2273 194 33 43 chr10 95139186 95139201 -50450087 - MLT2B3 LTR ERVL -39 508 494 471 35 0 0 chr10 95139201 95139258 -50450030 + (CA)n Simple_repeat Simple_repeat 2 58 0 2273 194 33 43 chr10 95139258 95139759 -50449529 - MLT2B3 LTR ERVL -53 494 1 25 31 0 0 chr10 95140314 95140346 -50448942 + AT_rich Low_complexity Low_complexity 1 32 0 858 206 96 0 chr10 95140480 95140679 -50448609 + MIR SINE MIR 3 220 -42 180 0 0 0 chr10 95141547 95141567 -50447721 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 1361 179 43 99 chr10 95142017 95142341 -50446947 + AluJo SINE Alu 1 306 -6 267 250 86 43 chr10 95142729 95142845 -50446443 + MIR SINE MIR 47 167 -95 1602 228 97 42 chr10 95142863 95143020 -50446268 - MLT1F1 LTR MaLR -2 565 418 2993 83 8 0 chr10 95143020 95143381 -50445907 + THE1B LTR MaLR 1 364 0 1602 228 97 42 chr10 95143381 95143753 -50445535 - MLT1F1 LTR MaLR -149 418 1 1149 202 50 43 chr10 95143984 95144428 -50444860 - MER63D DNA MER1_type -438 623 114 1362 204 55 96 chr10 95144582 95145147 -50444141 - MER34 LTR ERV1 0 542 1 2398 94 0 0 chr10 95145881 95146179 -50443109 + AluSx SINE Alu 1 298 -14 936 221 43 29 chr10 95146266 95146474 -50442814 - MLT1E LTR MaLR -382 211 1 5598 188 40 58 chr10 95146474 95147465 -50441823 - L1MC4a LINE L1 -260 7548 6540 2533 96 51 20 chr10 95147465 95147818 -50441470 - THE1B LTR MaLR 0 364 1 5598 188 40 58 chr10 95147818 95148006 -50441282 - L1MC4a LINE L1 -1268 6540 6394 1692 190 0 3 chr10 95148006 95148329 -50440959 + AluJb SINE Alu 1 322 0 5598 188 40 58 chr10 95148329 95148501 -50440787 - L1MC4a LINE L1 -1414 6394 6220 21 0 0 0 chr10 95148501 95148522 -50440766 + AT_rich Low_complexity Low_complexity 1 21 0 2179 127 0 3 chr10 95148549 95148848 -50440440 - AluSx SINE Alu -14 298 1 29 28 0 0 chr10 95149045 95149081 -50440207 + AT_rich Low_complexity Low_complexity 1 36 0 4414 116 18 9 chr10 95149542 95150172 -50439116 + MER41B LTR ERV1 1 635 0 351 266 0 0 chr10 95150478 95150557 -50438731 + MER5A DNA MER1_type 104 182 -7 231 217 0 133 chr10 95150626 95150709 -50438579 + MER5B DNA MER1_type 102 173 -5 771 206 16 57 chr10 95150903 95151097 -50438191 + MER5A DNA MER1_type 1 186 -3 298 203 0 76 chr10 95151110 95151189 -50438099 - MER5B DNA MER1_type -37 141 69 28 0 0 0 chr10 95151692 95151720 -50437568 + AT_rich Low_complexity Low_complexity 1 28 0 2231 90 27 10 chr10 95152235 95152536 -50436752 + AluSq SINE Alu 1 306 -7 2167 117 0 0 chr10 95153215 95153506 -50435782 + AluSg SINE Alu 1 291 -19 2141 117 0 32 chr10 95153886 95154202 -50435086 - AluSx SINE Alu -6 306 1 1251 0 0 0 chr10 95154209 95154344 -50434944 - AluYa5/8 SINE Alu -5 306 172 201 261 8 134 chr10 95154344 95154463 -50434825 + L2 LINE L2 2994 3097 -175 238 337 47 12 chr10 95155126 95155212 -50434076 + L2 LINE L2 3137 3225 -47 423 235 53 96 chr10 95156219 95156406 -50432882 + MIR3 SINE MIR 23 201 -7 2273 110 3 0 chr10 95156514 95156814 -50432474 - AluSq SINE Alu -12 301 1 252 293 157 14 chr10 95157834 95157974 -50431314 + MIR SINE MIR 15 174 -88 297 128 0 0 chr10 95158511 95158558 -50430730 + (CTG)n Simple_repeat Simple_repeat 3 49 0 230 81 27 0 chr10 95159409 95159446 -50429842 + L1MA9 LINE L1 6275 6312 0 185 219 0 0 chr10 95159667 95159699 -50429589 + L2 LINE L2 3270 3301 -12 261 211 39 0 chr10 95160826 95160878 -50428410 - L2 LINE L2 -14 3299 3246 1246 104 6 27 chr10 95161483 95161666 -50427622 - AluSg/x SINE Alu -2 308 130 2344 102 0 0 chr10 95161726 95162031 -50427257 - AluSx SINE Alu -7 305 1 381 304 52 0 chr10 95162297 95162432 -50426856 + MIR SINE MIR 105 246 -16 1447 172 0 55 chr10 95162568 95162841 -50426447 - AluJo SINE Alu -54 258 1 314 162 88 29 chr10 95163505 95163573 -50425715 + L2 LINE L2 3242 3313 0 504 363 23 35 chr10 95163656 95163835 -50425453 - L1MEd LINE L1 -5396 723 543 2495 64 0 0 chr10 95163835 95164130 -50425158 - AluY SINE Alu -16 295 1 504 363 23 35 chr10 95164130 95164347 -50424941 - L1MEd LINE L1 -5576 543 332 2152 123 0 3 chr10 95164578 95164879 -50424409 - AluSx SINE Alu -8 304 5 1913 145 13 16 chr10 95165791 95166102 -50423186 + AluJb SINE Alu 1 310 -2 297 0 0 0 chr10 95167278 95167311 -50421977 + (TG)n Simple_repeat Simple_repeat 2 34 0 225 0 0 0 chr10 95169196 95169221 -50420067 + (CA)n Simple_repeat Simple_repeat 1 25 0 506 272 63 6 chr10 95169612 95169770 -50419518 - MIR SINE MIR -37 225 59 933 228 43 21 chr10 95171364 95171597 -50417691 + MER58 DNA MER1_type 1 238 -103 823 134 8 8 chr10 95171941 95172075 -50417213 - FLAM_C SINE Alu -4 139 6 345 109 0 0 chr10 95172168 95172223 -50417065 + (TG)n Simple_repeat Simple_repeat 2 56 0 225 0 0 0 chr10 95172309 95172334 -50416954 + (T)n Simple_repeat Simple_repeat 1 25 0 1471 166 81 127 chr10 95172724 95172792 -50416496 + Charlie4a DNA MER1_type 1 71 -1890 2151 113 0 3 chr10 95172792 95173084 -50416204 - AluSx SINE Alu -20 292 2 1471 166 81 127 chr10 95173084 95173544 -50415744 + Charlie4a DNA MER1_type 71 505 -3 408 265 44 22 chr10 95174340 95174476 -50414812 - MER5B DNA MER1_type -35 143 5 213 39 0 0 chr10 95174587 95174613 -50414675 + (T)n Simple_repeat Simple_repeat 1 26 0 1114 157 0 6 chr10 95175344 95175522 -50413766 + FRAM SINE Alu 1 176 0 2191 132 0 0 chr10 95175530 95175834 -50413454 + AluSx SINE Alu 1 304 -8 6165 153 23 3 chr10 95176743 95178198 -50411090 + L1MA4A LINE L1 4821 6297 -6 286 237 62 0 chr10 95178249 95178346 -50410942 + L1M4 LINE L1 5191 5293 -853 1955 153 7 10 chr10 95178362 95178662 -50410626 + AluJb SINE Alu 1 299 -13 1060 204 92 107 chr10 95179205 95179598 -50409690 - L1ME3A LINE L1 0 6170 5784 916 178 124 50 chr10 95179607 95179809 -50409479 + MER20 DNA MER1_type 3 219 0 2467 174 28 4 chr10 95180144 95180610 -50408678 - L1MB7 LINE L1 0 6184 5708 243 146 0 0 chr10 95181657 95181698 -50407590 + (T)n Simple_repeat Simple_repeat 1 41 0 2076 116 0 61 chr10 95181700 95182029 -50407259 - AluSx SINE Alu -3 309 1 1850 166 0 17 chr10 95182311 95182613 -50406675 - AluJo SINE Alu -15 297 1 850 222 113 14 chr10 95183117 95183350 -50405938 - L1ME3A LINE L1 -200 5970 5715 380 277 7 46 chr10 95183350 95183512 -50405776 - MIR SINE MIR -65 143 13 1628 187 28 7 chr10 95184026 95184310 -50404978 + AluJo SINE Alu 1 290 -22 521 156 33 0 chr10 95185553 95185643 -50403645 - MER53 DNA DNA -1 188 96 * 566 172 0 0 chr10 95185564 95185657 -50403631 + MER53 DNA DNA 23 115 -74 360 290 10 0 chr10 95185785 95185885 -50403403 + L2 LINE L2 3172 3272 0 1851 103 197 9 chr10 95186095 95186435 -50402853 + L1MA6 LINE L1 5893 6296 -4 23 0 0 0 chr10 95186927 95186950 -50402338 + AT_rich Low_complexity Low_complexity 1 23 0 2153 82 10 3 chr10 95187050 95187374 -50401914 - AluY SINE Alu 0 311 2 2324 101 3 0 chr10 95187677 95187983 -50401305 + AluSp SINE Alu 1 307 -6 2369 74 19 7 chr10 95188007 95188316 -50400972 + AluSp SINE Alu 1 313 0 1707 267 107 38 chr10 95188330 95189196 -50400092 + L1MC4a LINE L1 5264 6189 -1619 720 268 84 25 chr10 95189350 95189589 -50399699 - MIR SINE MIR -8 254 2 294 274 24 24 chr10 95190130 95190254 -50399034 + MER5A DNA MER1_type 60 183 -6 810 153 102 32 chr10 95190419 95190576 -50398712 + AluJb SINE Alu 129 296 -16 386 297 173 43 chr10 95190743 95191187 -50398101 - L2 LINE L2 -835 2479 1978 258 186 0 0 chr10 95191551 95191594 -50397694 - MIR SINE MIR -38 224 182 199 240 0 20 chr10 95192659 95192709 -50396579 - L2 LINE L2 -2 3311 3263 * 217 301 227 43 chr10 95192699 95192862 -50396426 - MIR SINE MIR -47 215 23 244 310 130 34 chr10 95193248 95193487 -50395801 - L2 LINE L2 -465 2849 2588 1586 164 95 43 chr10 95193705 95194052 -50395236 - MLT1A1 LTR MaLR 0 365 1 2057 138 78 15 chr10 95195439 95195837 -50393451 - L1MC3 LINE L1 0 7785 7363 805 183 0 15 chr10 95197364 95197501 -50391787 + FLAM_A SINE Alu 7 141 -1 793 213 56 6 chr10 95197917 95198077 -50391211 - AluJo SINE Alu -23 289 122 1826 112 0 0 chr10 95198190 95198431 -50390857 + AluSc SINE Alu 3 243 -66 26 0 0 0 chr10 95198491 95198517 -50390771 + AT_rich Low_complexity Low_complexity 1 26 0 315 219 160 8 chr10 95198722 95198841 -50390447 - L1ME LINE L1 -326 5795 5659 1641 176 23 26 chr10 95198995 95199301 -50389987 + AluJb SINE Alu 3 307 -5 28 29 0 0 chr10 95199525 95199560 -50389728 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr10 95199760 95199788 -50389500 + AT_rich Low_complexity Low_complexity 1 28 0 1608 207 0 10 chr10 95199847 95200331 -50388957 - AluJo SINE Alu 0 312 1 255 251 102 60 chr10 95200882 95201049 -50388239 + MIR SINE MIR 36 209 -53 366 23 0 0 chr10 95201881 95201924 -50387364 + (TG)n Simple_repeat Simple_repeat 2 44 0 647 282 33 19 chr10 95202104 95202317 -50386971 - MIR SINE MIR -25 237 22 2110 153 0 0 chr10 95203241 95203549 -50385739 - AluSx SINE Alu -4 308 1 1831 216 153 52 chr10 95203597 95204329 -50384959 - L1ME2 LINE L1 -14 6150 5304 2406 93 0 0 chr10 95204329 95204639 -50384649 - AluSg SINE Alu 0 310 1 1831 216 153 52 chr10 95204639 95204677 -50384611 - L1ME2 LINE L1 -860 5304 5271 297 0 0 0 chr10 95204692 95204714 -50384574 + (TG)n Simple_repeat Simple_repeat 1 55 0 297 0 0 0 chr10 95204714 95204747 -50384541 + (TG)n Simple_repeat Simple_repeat 2 34 0 376 233 58 19 chr10 95204818 95204921 -50384367 + L2 LINE L2 3207 3313 0 1503 207 0 7 chr10 95205080 95205385 -50383903 + AluJb SINE Alu 1 303 0 2140 121 23 10 chr10 95206163 95206470 -50382818 - AluJo SINE Alu 0 312 2 23 0 0 0 chr10 95207481 95207504 -50381784 + AT_rich Low_complexity Low_complexity 1 23 0 210 312 11 32 chr10 95208142 95208235 -50381053 + MIR3 SINE MIR 111 201 -7 209 154 231 0 chr10 95208554 95208593 -50380695 - MIR SINE MIR -129 79 32 2102 126 3 7 chr10 95209324 95209626 -50379662 + AluSx SINE Alu 1 301 -11 756 275 30 17 chr10 95209700 95209941 -50379347 + MIR SINE MIR 11 251 -11 354 276 8 37 chr10 95210930 95211064 -50378224 - Charlie8 DNA MER1_type -2174 243 114 1885 139 0 27 chr10 95211064 95211365 -50377923 - AluJb SINE Alu -19 293 1 24 53 0 0 chr10 95211570 95211608 -50377680 + AT_rich Low_complexity Low_complexity 1 38 0 198 0 0 0 chr10 95211918 95211940 -50377348 + (A)n Simple_repeat Simple_repeat 1 22 0 515 231 76 58 chr10 95215478 95215703 -50373585 - MIR SINE MIR -32 230 2 1373 177 9 95 chr10 95216156 95216473 -50372815 - AluJo SINE Alu -2 310 21 2146 114 43 3 chr10 95216637 95216936 -50372352 - AluSx SINE Alu -1 311 1 616 250 175 35 chr10 95217820 95218048 -50371240 + MIR SINE MIR 2 261 -1 739 194 8 0 chr10 95218082 95218206 -50371082 + FLAM_A SINE Alu 1 125 -8 267 250 26 13 chr10 95218306 95218382 -50370906 - L2 LINE L2 -11 3261 3185 2096 127 0 0 chr10 95218468 95218791 -50370497 - AluSx SINE Alu 0 312 1 275 302 259 11 chr10 95219681 95219870 -50369418 - MIR SINE MIR -4 258 23 23 0 0 0 chr10 95220090 95220113 -50369175 + AT_rich Low_complexity Low_complexity 1 23 0 24 32 0 0 chr10 95220402 95220433 -50368855 + AT_rich Low_complexity Low_complexity 1 31 0 259 271 200 29 chr10 95221965 95222105 -50367183 - MIR SINE MIR -51 211 48 323 85 21 0 chr10 95223076 95223123 -50366165 - MLT2D LTR ERVL 0 520 473 219 227 23 0 chr10 95223132 95223260 -50366028 + (TA)n Simple_repeat Simple_repeat 1 131 0 26 0 0 0 chr10 95223260 95223286 -50366002 + AT_rich Low_complexity Low_complexity 1 26 0 313 221 50 7 chr10 95223301 95223441 -50365847 + (TA)n Simple_repeat Simple_repeat 1 146 0 240 35 0 0 chr10 95223457 95223486 -50365802 + (CA)n Simple_repeat Simple_repeat 2 30 0 2058 161 52 3 chr10 95223491 95223840 -50365448 - MLT2D LTR ERVL -48 366 1 1785 158 0 57 chr10 95224303 95224490 -50364798 - AluJo SINE Alu -14 298 135 279 0 0 0 chr10 95224490 95224521 -50364767 + (CA)n Simple_repeat Simple_repeat 2 32 0 1785 158 0 57 chr10 95224521 95224649 -50364639 - AluJo SINE Alu -177 135 1 1693 82 78 19 chr10 95224677 95224755 -50364533 + L1MA3 LINE L1 6034 6106 -199 2135 104 0 0 chr10 95224755 95225061 -50364227 + AluSc SINE Alu 1 306 0 1693 82 78 19 chr10 95225061 95225237 -50364051 + L1MA3 LINE L1 6106 6305 0 294 230 20 110 chr10 95227004 95227063 -50362225 + MIR3 SINE MIR 92 140 -68 2121 113 10 0 chr10 95227063 95227356 -50361932 + AluSx SINE Alu 1 296 -16 294 230 20 110 chr10 95227356 95227396 -50361892 + MIR3 SINE MIR 140 182 -26 38 22 0 0 chr10 95227553 95227598 -50361690 + AT_rich Low_complexity Low_complexity 1 45 0 4064 136 36 31 chr10 95227779 95228322 -50360966 + Tigger1 DNA MER2_type 1 549 -1869 2221 107 10 0 chr10 95228322 95228621 -50360667 + AluSp SINE Alu 3 304 -9 4064 136 36 31 chr10 95228621 95228740 -50360548 + Tigger1 DNA MER2_type 549 666 -1752 876 123 58 13 chr10 95228740 95228895 -50360393 - LTR49 LTR ERV1 0 595 434 650 246 12 36 chr10 95229116 95229283 -50360005 - MER5B DNA MER1_type -15 163 1 333 319 144 22 chr10 95229318 95229588 -50359700 + L2 LINE L2 2306 2608 -706 316 325 56 12 chr10 95230015 95230175 -50359113 + MIR3 SINE MIR 41 207 -1 417 39 0 0 chr10 95230200 95230251 -50359037 + (TA)n Simple_repeat Simple_repeat 2 52 0 1131 213 43 5 chr10 95231175 95231386 -50357902 - MER20 DNA MER1_type 0 219 1 2397 107 0 0 chr10 95231792 95232102 -50357186 - AluSg SINE Alu 0 310 1 1906 300 67 10 chr10 95232142 95232755 -50356533 - MER115 DNA AcHobo -2 691 44 4713 150 40 57 chr10 95232918 95233076 -50356212 - L1MB3 LINE L1 -7 6176 6017 1532 161 56 14 chr10 95233076 95233361 -50355927 + AluJo SINE Alu 1 297 -15 4713 150 40 57 chr10 95233361 95233942 -50355346 - L1MB3 LINE L1 -166 6017 5428 294 29 0 0 chr10 95233942 95233977 -50355311 + (TG)n Simple_repeat Simple_repeat 2 36 0 1708 141 27 4 chr10 95233977 95234239 -50355049 - AluJb SINE Alu -44 268 1 4713 150 40 57 chr10 95234239 95234849 -50354439 - L1MB3 LINE L1 -753 5430 4850 3833 203 40 45 chr10 95235115 95236017 -50353271 + Charlie1a DNA MER1_type 1 897 -558 3145 176 37 17 chr10 95235995 95236641 -50352647 + Charlie1 DNA MER1_type 2103 2761 0 * 2264 116 0 0 chr10 95236930 95237231 -50352057 - AluSx SINE Alu -11 301 1 1887 134 7 24 chr10 95237299 95237597 -50351691 - AluJo SINE Alu -19 293 1 2094 116 17 0 chr10 95238581 95238874 -50350414 + AluSx SINE Alu 1 298 -14 2351 88 3 0 chr10 95239438 95239732 -50349556 + AluSg SINE Alu 1 295 -15 194 361 65 19 chr10 95240950 95241058 -50348230 + L2 LINE L2 3145 3257 -15 205 182 0 0 chr10 95241732 95241765 -50347523 + (CATATA)n Simple_repeat Simple_repeat 4 36 0 255 266 0 0 chr10 95242465 95242529 -50346759 - MIR3 SINE MIR -23 185 122 201 220 68 17 chr10 95242603 95242662 -50346626 - MIR SINE MIR -130 78 17 2164 114 17 0 chr10 95243460 95243757 -50345531 - AluSg SINE Alu -8 302 1 1372 141 111 67 chr10 95243757 95243859 -50345429 - AluSx SINE Alu -2 310 214 3628 92 17 6 chr10 95243859 95244339 -50344949 + L1PA8A LINE L1 5633 6117 -14 1372 141 111 67 chr10 95244339 95244533 -50344755 - AluSx SINE Alu -98 214 1 186 71 0 0 chr10 95244663 95244691 -50344597 + (T)n Simple_repeat Simple_repeat 1 28 0 761 211 92 79 chr10 95245435 95245739 -50343549 + LTR49 LTR ERV1 5 312 -283 300 271 50 29 chr10 95245752 95245892 -50343396 + HERVL LTR ERVL 3406 3548 -2106 298 208 208 9 chr10 95246299 95246405 -50342883 + LTR67 LTR ERVL 429 555 -2 746 180 93 0 chr10 95246639 95246778 -50342510 - AluJb SINE Alu -9 303 152 607 259 205 0 chr10 95248025 95248230 -50341058 - MIR SINE MIR -4 258 12 23 68 0 0 chr10 95249236 95249280 -50340008 + AT_rich Low_complexity Low_complexity 1 44 0 180 179 0 0 chr10 95249911 95249950 -50339338 + (CA)n Simple_repeat Simple_repeat 2 40 0 21 0 0 0 chr10 95251050 95251071 -50338217 + AT_rich Low_complexity Low_complexity 1 21 0 2141 89 28 0 chr10 95251242 95251533 -50337755 + AluSq SINE Alu 1 299 -14 338 280 275 11 chr10 95253109 95253298 -50335990 - MIR SINE MIR -4 258 20 350 276 87 73 chr10 95253834 95254120 -50335168 + L1MC4a LINE L1 2156 2445 -3981 299 316 115 8 chr10 95254232 95254485 -50334803 + L1MC4a LINE L1 2532 2811 -3615 267 242 67 30 chr10 95254577 95254742 -50334546 - L1M4 LINE L1 -874 5272 5102 600 217 111 17 chr10 95255333 95255513 -50333775 + MIR SINE MIR 63 259 -3 746 139 134 76 chr10 95255892 95255924 -50333364 + AluJo SINE Alu 78 107 -205 2055 128 131 13 chr10 95255924 95256307 -50332981 + MSTA LTR MaLR 1 428 0 746 139 134 76 chr10 95256307 95256446 -50332842 + AluJo SINE Alu 107 259 -53 1757 141 28 7 chr10 95257121 95257405 -50331883 + AluJb SINE Alu 2 291 -21 1389 195 89 7 chr10 95257502 95257784 -50331504 - AluJo SINE Alu -6 306 2 2034 105 0 11 chr10 95258209 95258485 -50330803 - AluSq SINE Alu -17 296 24 1892 87 0 45 chr10 95258531 95258796 -50330492 + AluSg SINE Alu 3 255 -55 845 204 30 12 chr10 95258909 95259076 -50330212 + AluJo SINE Alu 120 289 -23 301 260 148 59 chr10 95259301 95259579 -50329709 + L1MC4a LINE L1 4880 5205 -1221 1848 156 0 7 chr10 95259579 95259887 -50329401 + AluSx SINE Alu 1 306 -6 301 260 148 59 chr10 95259887 95260000 -50329288 + L1MC4a LINE L1 5205 5306 -1120 615 229 133 78 chr10 95260089 95260579 -50328709 + L1MC5 LINE L1 7313 7829 -132 1569 256 101 59 chr10 95260913 95261151 -50328137 + L1MC4a LINE L1 5467 5694 -740 1521 177 22 47 chr10 95261151 95261468 -50327820 + AluJo SINE Alu 3 311 -1 1569 256 101 59 chr10 95261468 95261962 -50327326 + L1MC4a LINE L1 5694 6098 -336 1473 107 0 103 chr10 95261967 95262239 -50327049 + AluSg/x SINE Alu 66 309 -3 1513 168 84 37 chr10 95262653 95262975 -50326313 - MER1B DNA MER1_type 0 337 1 26 0 0 0 chr10 95263152 95263178 -50326110 + AT_rich Low_complexity Low_complexity 1 26 0 300 267 128 0 chr10 95263312 95263398 -50325890 + L2 LINE L2 3176 3272 0 1436 191 44 10 chr10 95264203 95264497 -50324791 + AluJo SINE Alu 1 304 -8 214 337 152 51 chr10 95264666 95265061 -50324227 + L2 LINE L2 2825 3259 -13 2032 113 24 0 chr10 95265068 95265359 -50323929 + AluSx SINE Alu 1 298 -14 212 83 0 28 chr10 95267593 95267629 -50321659 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 1036 190 0 0 chr10 95267639 95267813 -50321475 - AluJo SINE Alu -138 174 1 21 36 0 0 chr10 95267836 95267864 -50321424 + AT_rich Low_complexity Low_complexity 1 28 0 296 140 0 0 chr10 95268368 95268418 -50320870 - L1PA13 LINE L1 -264 5899 5850 1158 51 6 6 chr10 95268419 95268575 -50320713 + L1PA13 LINE L1 6006 6161 -2 374 250 43 79 chr10 95269677 95269841 -50319447 - MIR SINE MIR -61 201 44 434 254 127 33 chr10 95269891 95270068 -50319220 + L1MC2 LINE L1 895 1109 -5010 1753 158 3 20 chr10 95270068 95270372 -50318916 + AluJb SINE Alu 1 299 -13 434 254 127 33 chr10 95270372 95270469 -50318819 + L1MC2 LINE L1 1109 1195 -4924 2316 113 0 0 chr10 95270539 95270849 -50318439 + AluSx SINE Alu 1 310 -2 22 0 0 0 chr10 95270912 95270934 -50318354 + AT_rich Low_complexity Low_complexity 1 22 0 248 247 74 0 chr10 95271008 95271089 -50318199 + L1MEd LINE L1 91 177 -5942 1898 148 7 10 chr10 95271879 95272170 -50317118 - AluJb SINE Alu -22 290 1 766 136 14 27 chr10 95272199 95272346 -50316942 + L1MA5A LINE L1 6151 6295 -2 388 223 136 64 chr10 95272684 95272935 -50316353 + L1ME4a LINE L1 5841 6109 -12 198 0 0 0 chr10 95273579 95273601 -50315687 + (A)n Simple_repeat Simple_repeat 1 22 0 406 179 48 0 chr10 95273603 95273687 -50315601 + AluSq/x SINE Alu 48 135 -167 303 196 82 21 chr10 95273696 95273770 -50315518 + L1MC2 LINE L1 2199 2282 -3847 2047 148 28 22 chr10 95273770 95274129 -50315159 - MER46B DNA MER2_type 0 236 1 303 196 82 21 chr10 95274129 95274151 -50315137 + L1MC2 LINE L1 2282 2301 -3828 1287 198 56 54 chr10 95274192 95274448 -50314840 + L1MC2 LINE L1 4890 5144 -985 1933 101 4 8 chr10 95274448 95274705 -50314583 + AluSq SINE Alu 34 289 -24 263 28 28 0 chr10 95274708 95274744 -50314544 + (TAAAA)n Simple_repeat Simple_repeat 5 41 0 1287 198 56 54 chr10 95274744 95274892 -50314396 + L1MC2 LINE L1 5145 5299 -830 608 115 221 0 chr10 95274894 95275016 -50314272 + L1MA5 LINE L1 6152 6300 0 * 4275 171 88 20 chr10 95275014 95276008 -50313280 + L1MC2 LINE L1 5266 6327 0 438 316 132 43 chr10 95276208 95276626 -50312662 + L1MEd LINE L1 330 784 -5335 1046 162 6 17 chr10 95276743 95276916 -50312372 - AluJo SINE Alu -141 171 1 377 298 208 30 chr10 95276965 95277365 -50311923 + L1MEd LINE L1 1215 1685 -4625 1552 159 45 4 chr10 95277709 95277973 -50311315 + AluJb SINE Alu 24 298 -14 1626 174 34 7 chr10 95278069 95278367 -50310921 + AluJb SINE Alu 1 306 -6 247 186 0 0 chr10 95278744 95278787 -50310501 + L1 LINE L1 4939 4981 -1165 320 326 99 16 chr10 95279072 95279314 -50309974 + L1ME LINE L1 5550 5811 -359 48 32 0 0 chr10 95280326 95280388 -50308900 + AT_rich Low_complexity Low_complexity 1 62 0 25 31 0 0 chr10 95280615 95280647 -50308641 + AT_rich Low_complexity Low_complexity 1 32 0 2028 106 3 0 chr10 95281657 95281940 -50307348 + AluY SINE Alu 12 295 -16 1418 186 48 3 chr10 95282313 95282604 -50306684 + AluJo SINE Alu 5 308 -4 21 0 0 0 chr10 95282814 95282835 -50306453 + AT_rich Low_complexity Low_complexity 1 21 0 1741 192 0 3 chr10 95284410 95284723 -50304565 + AluJb SINE Alu 1 312 0 216 0 0 0 chr10 95284954 95284978 -50304310 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2074 98 3 66 chr10 95285876 95286194 -50303094 + AluSx SINE Alu 3 300 -12 442 237 112 40 chr10 95286711 95286907 -50302381 - MIR SINE MIR -13 249 51 2823 175 52 6 chr10 95287033 95287569 -50301719 + MER68 LTR ERV1 2 562 0 571 326 65 8 chr10 95288369 95288614 -50300674 - MIR SINE MIR -1 261 3 1500 169 28 0 chr10 95288942 95289196 -50300092 + AluJo SINE Alu 29 289 -23 931 182 23 36 chr10 95289465 95289672 -50299616 + MER20 DNA MER1_type 14 219 0 493 318 85 22 chr10 95289953 95290176 -50299112 - MIR SINE MIR -14 248 12 651 111 0 10 chr10 95291206 95291305 -50297983 + MER4A LTR ERV1 1 98 -566 1782 130 5 54 chr10 95291305 95291668 -50297620 + MER4A LTR ERV1 261 664 0 2675 113 228 24 chr10 95291671 95292314 -50296974 + MER4A-int LTR ERV1 1 840 -5758 1253 251 45 17 chr10 95292358 95292727 -50296561 + MER4A-int LTR ERV1 1845 3064 -4171 * 4296 113 35 11 chr10 95292715 95293595 -50295693 + MER4A-int LTR ERV1 189 1144 -5614 270 0 0 0 chr10 95293597 95293627 -50295661 + (TG)n Simple_repeat Simple_repeat 2 31 0 5003 100 211 157 chr10 95293630 95295462 -50293826 + MER4A-int LTR ERV1 1748 3678 -2920 10492 93 59 47 chr10 95295463 95297495 -50291793 + MER4A-int LTR ERV1 3837 5896 -702 526 182 212 0 chr10 95297496 95297628 -50291660 + AluSg/x SINE Alu 137 296 -16 4159 103 51 17 chr10 95297628 95298316 -50290972 + MER4A-int LTR ERV1 5888 6598 0 601 96 53 11 chr10 95298317 95298411 -50290877 + MER4A LTR ERV1 1 98 -566 1791 141 20 44 chr10 95298411 95298765 -50290523 + MER4A LTR ERV1 261 664 0 2051 140 0 0 chr10 95299355 95299641 -50289647 - AluSx SINE Alu -26 286 1 251 207 52 0 chr10 95301520 95301578 -50287710 - L1ME2 LINE L1 -213 5951 5891 1858 204 115 8 chr10 95301664 95302169 -50287119 + MER34B LTR ERV1 7 565 0 1269 269 85 7 chr10 95302194 95302652 -50286636 - L1ME2 LINE L1 -414 5748 5255 398 221 106 18 chr10 95302691 95302804 -50286484 - MIR SINE MIR -40 222 100 543 272 140 15 chr10 95302932 95303274 -50286014 - L1ME2 LINE L1 -1672 4474 4090 618 115 0 0 chr10 95303433 95303553 -50285735 + AluSg/x SINE Alu 192 311 0 1189 277 92 28 chr10 95303564 95304142 -50285146 - L1ME2 LINE L1 -2168 3978 3364 1501 166 218 25 chr10 95304143 95304575 -50284713 - Tigger2 DNA MER2_type 0 2718 2 1980 110 40 0 chr10 95304596 95304917 -50284371 - AluSq SINE Alu 0 332 1 302 220 95 18 chr10 95304948 95305116 -50284172 - L1ME2 LINE L1 -2845 3301 3121 308 344 80 24 chr10 95305144 95305356 -50283932 - L1ME2 LINE L1 -3283 2863 2640 512 277 125 11 chr10 95305358 95305733 -50283555 - L1ME2 LINE L1 -3528 2618 2201 1953 144 0 0 chr10 95306022 95306333 -50282955 + AluSx SINE Alu 1 311 0 198 355 123 49 chr10 95306736 95307127 -50282161 + L2 LINE L2 2241 2660 -654 1915 95 57 4 chr10 95307243 95307526 -50281762 - AluSx SINE Alu 0 305 9 187 283 0 0 chr10 95308619 95308665 -50280623 + L2 LINE L2 3264 3309 -4 417 297 35 28 chr10 95309070 95309215 -50280073 + MIR3 SINE MIR 40 185 -23 194 366 89 0 chr10 95313304 95313416 -50275872 - L2 LINE L2 -1 3271 3150 1671 122 24 84 chr10 95316011 95316307 -50272981 + AluJb SINE Alu 7 284 -28 293 319 39 44 chr10 95316419 95316601 -50272687 - MIR SINE MIR -46 216 36 180 0 0 0 chr10 95316957 95316977 -50272311 + (CAA)n Simple_repeat Simple_repeat 2 21 0 263 277 178 59 chr10 95317264 95317365 -50271923 + MER81 DNA DNA 2 114 0 23 33 0 0 chr10 95317798 95317828 -50271460 + AT_rich Low_complexity Low_complexity 1 30 0 2313 94 0 14 chr10 95318106 95318403 -50270885 + AluSx SINE Alu 1 293 -19 373 336 8 8 chr10 95318409 95318531 -50270757 - MER5A DNA MER1_type -5 184 63 648 147 49 15 chr10 95318551 95318692 -50270596 + MLT1A2 LTR MaLR 186 427 -40 22 0 0 0 chr10 95319128 95319150 -50270138 + AT_rich Low_complexity Low_complexity 1 22 0 3521 94 6 10 chr10 95319286 95319796 -50269492 + L1MA3 LINE L1 5789 6296 -9 221 214 57 0 chr10 95319804 95319874 -50269414 + A-rich Low_complexity Low_complexity 2 75 0 856 268 38 13 chr10 95321227 95321466 -50267822 + MIR SINE MIR 11 255 -7 2551 60 0 0 chr10 95322169 95322469 -50266819 - AluY SINE Alu -11 300 1 980 167 0 18 chr10 95322561 95322729 -50266559 - FRAM SINE Alu -14 162 1 26 0 0 0 chr10 95324069 95324095 -50265193 + AT_rich Low_complexity Low_complexity 1 26 0 12895 108 30 32 chr10 95324222 95324836 -50264452 + Tigger1 DNA MER2_type 1 615 -1803 1595 188 3 21 chr10 95324836 95325123 -50264165 - AluJo SINE Alu -30 282 1 12895 108 30 32 chr10 95325123 95326087 -50263201 + Tigger1 DNA MER2_type 615 1577 -841 2113 92 4 7 chr10 95326087 95326414 -50262874 - AluSc SINE Alu 0 326 1 12895 108 30 32 chr10 95326414 95326888 -50262400 + Tigger1 DNA MER2_type 1577 2051 -367 189 319 0 0 chr10 95327772 95327819 -50261469 - L3 LINE CR1 -5 1572 1526 576 308 60 1 chr10 95327829 95328034 -50261254 + MIR SINE MIR 3 219 -43 442 339 48 5 chr10 95328088 95328274 -50261014 - L3 LINE CR1 -96 1481 1288 210 294 141 54 chr10 95328336 95328520 -50260768 - L3 LINE CR1 -563 1014 815 1022 235 73 4 chr10 95328663 95328897 -50260391 - MIR SINE MIR -5 257 8 676 127 68 0 chr10 95328935 95329053 -50260235 - AluJb SINE Alu -11 301 176 1235 168 0 19 chr10 95329060 95329269 -50260019 + AluJo SINE Alu 93 297 -15 7056 206 83 63 chr10 95329278 95329664 -50259624 - L1MDb LINE L1 -1293 5247 4870 1623 177 7 3 chr10 95329664 95329947 -50259341 - 7SLRNA srpRNA srpRNA -7 313 30 7056 206 83 63 chr10 95329947 95330579 -50258709 - L1MDb LINE L1 -1670 4870 4252 1998 125 47 0 chr10 95330579 95330876 -50258412 - AluSx SINE Alu -1 311 1 7056 206 83 63 chr10 95330876 95332454 -50256834 - L1MDb LINE L1 -2288 4252 2636 724 191 40 17 chr10 95333043 95333216 -50256072 - AluSq SINE Alu -136 177 1 21 57 0 0 chr10 95333265 95333300 -50255988 + AT_rich Low_complexity Low_complexity 1 35 0 213 305 12 12 chr10 95333665 95333747 -50255541 - MIR3 SINE MIR -6 202 121 1626 168 0 11 chr10 95333754 95334016 -50255272 + AluJb SINE Alu 1 259 -53 936 282 89 58 chr10 95334285 95334678 -50254610 - MLT1K LTR MaLR -10 578 174 388 279 106 31 chr10 95335580 95335806 -50253482 + L1M4 LINE L1 2266 2508 -3638 6030 143 87 5 chr10 95335873 95336978 -50252310 + Tigger3b DNA MER2_type 1 1196 -35 22 56 0 0 chr10 95337018 95337054 -50252234 + AT_rich Low_complexity Low_complexity 1 36 0 23 86 0 0 chr10 95337172 95337230 -50252058 + AT_rich Low_complexity Low_complexity 1 58 0 419 233 42 8 chr10 95338546 95338666 -50250622 + MIR SINE MIR 127 250 -12 22 0 0 0 chr10 95339671 95339693 -50249595 + AT_rich Low_complexity Low_complexity 1 22 0 1109 171 95 8 chr10 95339780 95339897 -50249391 + AluSx SINE Alu 1 106 -206 219 69 0 0 chr10 95339897 95339926 -50249362 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 1109 171 95 8 chr10 95339926 95340060 -50249228 + AluSx SINE Alu 106 274 -38 911 92 46 7 chr10 95340794 95340947 -50248341 - Tigger2 DNA MER2_type -99 2619 2461 3691 147 42 39 chr10 95341004 95341197 -50248091 - Tigger2 DNA MER2_type -1965 753 562 2301 107 0 0 chr10 95341197 95341507 -50247781 + AluSg SINE Alu 1 310 0 3691 147 42 39 chr10 95341507 95342027 -50247261 - Tigger2 DNA MER2_type -2156 562 38 727 261 102 10 chr10 95342190 95342573 -50246715 - L1MDb LINE L1 -4044 2496 2079 772 178 65 30 chr10 95342575 95342767 -50246521 - FRAM SINE Alu 0 40 1 3142 227 90 18 chr10 95342767 95343868 -50245420 - L1MDb LINE L1 -4474 2066 934 355 374 37 26 chr10 95344460 95344730 -50244558 - L1MDb LINE L1 -6212 328 56 502 119 0 3 chr10 95344732 95344976 -50244312 + AluSx SINE Alu 1 307 -3 1759 214 13 11 chr10 95345041 95345224 -50244064 + MLT1A2 LTR MaLR 1 182 -192 216 0 0 0 chr10 95345224 95345248 -50244040 + (TC)n Simple_repeat Simple_repeat 1 24 0 1759 214 13 11 chr10 95345248 95345437 -50243851 + MLT1A2 LTR MaLR 182 374 0 1868 166 7 10 chr10 95346690 95346992 -50242296 + AluJo SINE Alu 1 301 -11 21 0 0 0 chr10 95348028 95348049 -50241239 + AT_rich Low_complexity Low_complexity 1 21 0 208 316 0 95 chr10 95348162 95348257 -50241031 - L2 LINE L2 -20 3293 3208 990 210 44 48 chr10 95348262 95348321 -50240967 - MIR SINE MIR 0 262 204 360 0 0 0 chr10 95348321 95348361 -50240927 + (CA)n Simple_repeat Simple_repeat 2 41 0 990 210 44 48 chr10 95348361 95348395 -50240893 - MIR SINE MIR -58 204 171 2210 127 0 10 chr10 95348395 95348703 -50240585 + AluSx SINE Alu 1 305 -7 990 210 44 48 chr10 95348703 95348856 -50240432 - MIR SINE MIR -91 171 16 1951 144 26 7 chr10 95349012 95349317 -50239971 + AluJb SINE Alu 1 311 -1 983 102 0 15 chr10 95349398 95349535 -50239753 + FLAM_C SINE Alu 9 143 0 23 54 0 0 chr10 95351248 95351285 -50238003 + AT_rich Low_complexity Low_complexity 1 37 0 2946 112 39 0 chr10 95351574 95352037 -50237251 - Tigger3b DNA MER2_type -1 1230 750 3345 130 46 13 chr10 95352087 95352701 -50236587 - Tigger3b DNA MER2_type -596 635 2 249 274 115 0 chr10 95353052 95353165 -50236123 - L1ME LINE L1 -311 5810 5685 1586 214 148 29 chr10 95353199 95353342 -50235946 - Charlie2 DNA MER1_type -1 2861 2736 2146 67 0 119 chr10 95353342 95353685 -50235603 - AluSq SINE Alu -11 302 1 1586 214 148 29 chr10 95353685 95354412 -50234876 - Charlie2 DNA MER1_type -126 2736 1887 636 228 65 49 chr10 95354438 95354684 -50234604 - Charlie2 DNA MER1_type -2538 324 75 2052 131 38 0 chr10 95356001 95356292 -50232996 + AluSx SINE Alu 1 302 -10 424 297 35 28 chr10 95357918 95358063 -50231225 + MIR3 SINE MIR 40 185 -23 940 168 114 6 chr10 95359061 95359228 -50230060 - AluJo SINE Alu -127 185 1 270 181 39 142 chr10 95359235 95359261 -50230027 - L1MD3 LINE L1 0 7995 7968 2182 127 0 0 chr10 95359261 95359553 -50229735 - AluSx SINE Alu -20 292 1 270 181 39 142 chr10 95359553 95359599 -50229689 - L1MD3 LINE L1 -27 7968 7939 1982 154 13 3 chr10 95359599 95359905 -50229383 - AluJb SINE Alu -3 309 1 270 181 39 142 chr10 95359905 95359958 -50229330 - L1MD3 LINE L1 -56 7939 7882 2202 129 3 0 chr10 95359986 95360288 -50229000 + AluSx SINE Alu 1 303 -9 826 145 0 0 chr10 95360301 95360418 -50228870 - FLAM_C SINE Alu -16 117 1 469 235 130 6 chr10 95360420 95360582 -50228706 - L1MC4a LINE L1 -90 7718 7537 765 132 9 0 chr10 95361107 95361221 -50228067 - AluJo SINE Alu -177 135 21 799 134 56 0 chr10 95361462 95361604 -50227684 - MER66A LTR ERV1 -83 395 246 6779 59 0 18 chr10 95361613 95362960 -50226328 - L1PA6 LINE L1 0 6154 4811 392 266 19 57 chr10 95363132 95363290 -50225998 + MLT1H-int LTR MaLR 1032 1183 -188 180 111 0 0 chr10 95363416 95363443 -50225845 + (TG)n Simple_repeat Simple_repeat 1 27 0 914 214 98 96 chr10 95363522 95363961 -50225327 + MLT1H LTR MaLR 76 515 -34 300 244 22 22 chr10 95363999 95364089 -50225199 - MLT1H1 LTR MaLR -164 391 302 236 167 0 0 chr10 95364179 95364221 -50225067 + MLT1H LTR MaLR 547 588 -2 2056 120 7 13 chr10 95364231 95364530 -50224758 + AluSx SINE Alu 1 297 -15 341 296 37 9 chr10 95364636 95364744 -50224544 + L2 LINE L2 3199 3309 -4 396 90 346 0 chr10 95364816 95364894 -50224394 + MER83 LTR ERV1 1 105 -343 681 90 0 0 chr10 95365053 95365153 -50224135 + AluSg/x SINE Alu 210 309 0 2349 70 33 3 chr10 95366238 95366538 -50222750 + AluSc SINE Alu 1 309 0 183 42 0 0 chr10 95369914 95369938 -50219350 + (CCCTG)n Simple_repeat Simple_repeat 2 25 0 32 57 0 0 chr10 95369996 95370049 -50219239 + GC_rich Low_complexity Low_complexity 1 53 0 23 86 0 0 chr10 95370253 95370311 -50218977 + GC_rich Low_complexity Low_complexity 1 58 0 201 39 0 0 chr10 95370460 95370486 -50218802 + (CGG)n Simple_repeat Simple_repeat 3 28 0 21 82 0 0 chr10 95370635 95370684 -50218604 + GC_rich Low_complexity Low_complexity 1 49 0 2315 111 0 0 chr10 95375710 95376017 -50213271 - AluSx SINE Alu -5 307 1 829 268 39 13 chr10 95376424 95376655 -50212633 + MIR SINE MIR 23 259 -3 2083 105 3 27 chr10 95377999 95378293 -50210995 - AluSp SINE Alu -26 287 1 26 30 0 0 chr10 95378649 95378682 -50210606 + AT_rich Low_complexity Low_complexity 1 33 0 243 0 0 0 chr10 95378916 95378943 -50210345 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1034 186 16 0 chr10 95379072 95379255 -50210033 - MER5A DNA MER1_type -1 188 3 1683 184 10 10 chr10 95379486 95379785 -50209503 + AluJo SINE Alu 1 299 -13 208 326 79 0 chr10 95379788 95379877 -50209411 + MIR SINE MIR 58 153 -109 700 208 21 42 chr10 95379941 95380133 -50209155 + MER20 DNA MER1_type 4 191 -28 21 0 0 0 chr10 95380469 95380490 -50208798 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr10 95382118 95382141 -50207147 + AT_rich Low_complexity Low_complexity 1 23 0 180 0 0 0 chr10 95383411 95383431 -50205857 + (T)n Simple_repeat Simple_repeat 1 20 0 21 71 0 0 chr10 95384055 95384097 -50205191 + AT_rich Low_complexity Low_complexity 1 42 0 2304 54 0 11 chr10 95384567 95384845 -50204443 - AluY SINE Alu -15 296 22 276 77 0 0 chr10 95385595 95385634 -50203654 + (TG)n Simple_repeat Simple_repeat 2 40 0 2241 109 3 3 chr10 95385805 95386116 -50203172 - AluSx SINE Alu 0 312 2 338 292 46 74 chr10 95387242 95387458 -50201830 - MIR SINE MIR -2 260 51 191 292 77 0 chr10 95387470 95387535 -50201753 + MIR SINE MIR 183 252 -10 7019 51 0 0 chr10 95387719 95388702 -50200586 - L1PA5 LINE L1 -6 6148 5155 289 134 20 0 chr10 95390043 95390109 -50199179 + L1ME3 LINE L1 6090 6160 -2 728 206 153 16 chr10 95390308 95390497 -50198791 - MIR SINE MIR -8 254 40 403 309 17 0 chr10 95390499 95390674 -50198614 + L1ME4a LINE L1 5649 5826 -295 782 267 74 0 chr10 95391398 95391600 -50197688 - MIR SINE MIR -44 218 2 505 274 203 19 chr10 95392123 95392335 -50196953 + MIR SINE MIR 8 258 -4 216 366 86 72 chr10 95392582 95393014 -50196274 + L2 LINE L2 2834 3271 -1 1331 245 110 0 chr10 95393113 95393468 -50195820 + MSTD LTR MaLR 1 394 -2 4210 245 63 29 chr10 95393468 95394727 -50194561 + MSTD-int LTR MaLR 2 1303 -432 372 155 14 0 chr10 95394715 95394786 -50194502 + MSTD-int LTR MaLR 1664 1735 0 * 1433 204 82 22 chr10 95394786 95395153 -50194135 + MSTD LTR MaLR 1 389 -7 21 36 0 0 chr10 95395360 95395388 -50193900 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr10 95395717 95395738 -50193550 + AT_rich Low_complexity Low_complexity 1 21 0 250 298 142 5 chr10 95396099 95396304 -50192984 - L1ME4a LINE L1 -12 6109 5877 225 256 93 58 chr10 95396530 95396702 -50192586 - L1MC5 LINE L1 -473 7488 7311 254 298 80 18 chr10 95396716 95397182 -50192106 - L1MC4 LINE L1 -582 7460 6971 1551 197 38 10 chr10 95397209 95397498 -50191790 - AluJb SINE Alu -15 297 1 886 282 45 8 chr10 95397523 95397912 -50191376 - L1MC4 LINE L1 -892 6916 6563 1871 168 31 0 chr10 95398026 95398318 -50190970 + AluJb SINE Alu 3 303 -9 799 162 0 22 chr10 95398329 95398465 -50190823 + FLAM_C SINE Alu 1 133 0 342 288 64 69 chr10 95398779 95399012 -50190276 - L1MC4a LINE L1 -1751 6057 5826 432 183 14 0 chr10 95399489 95399560 -50189728 - Tigger2 DNA MER2_type 0 2718 2647 22 0 0 0 chr10 95400291 95400313 -50188975 + AT_rich Low_complexity Low_complexity 1 22 0 648 168 0 80 chr10 95400609 95400746 -50188542 + FLAM_A SINE Alu 1 126 -7 2080 112 30 0 chr10 95402640 95402935 -50186353 - AluSq SINE Alu -9 304 1 39086 75 5 13 chr10 95403397 95409572 -50179716 - L1PA6 LINE L1 -7 6147 11 2066 141 0 0 chr10 95409581 95409886 -50179402 - AluJb SINE Alu -7 305 1 325 257 101 9 chr10 95410025 95410134 -50179154 + MER103 DNA DNA 15 133 -33 246 158 0 53 chr10 95410137 95410194 -50179094 + T-rich Low_complexity Low_complexity 3 56 0 1700 161 25 11 chr10 95410357 95410642 -50178646 - AluJo SINE Alu -21 291 3 600 152 86 53 chr10 95410895 95411046 -50178242 - L1MB5 LINE L1 0 6174 6019 2114 107 10 10 chr10 95411059 95411358 -50177930 - AluSx SINE Alu -4 308 10 247 325 154 62 chr10 95411452 95411692 -50177596 - MIR SINE MIR 0 262 1 566 253 51 6 chr10 95411743 95411901 -50177387 + Charlie8 DNA MER1_type 46 210 -2207 1215 277 160 9 chr10 95412159 95412722 -50176566 + HAL1 LINE L1 1316 1963 -544 402 329 114 36 chr10 95412786 95413093 -50176195 + HAL1 LINE L1 2158 2488 -19 309 39 0 77 chr10 95413102 95413180 -50176108 + (TA)n Simple_repeat Simple_repeat 1 72 0 9510 194 94 61 chr10 95413185 95414028 -50175260 - L1MB3 LINE L1 -62 6357 5543 1814 119 51 37 chr10 95414028 95414322 -50174966 + AluSg SINE Alu 1 298 -12 9510 194 94 61 chr10 95414322 95414907 -50174381 - L1MB3 LINE L1 -876 5543 4978 1689 201 0 0 chr10 95414907 95415195 -50174093 - AluJo SINE Alu -24 288 1 9510 194 94 61 chr10 95415195 95416019 -50173269 - L1MB3 LINE L1 -1441 4978 4182 1958 135 10 10 chr10 95416019 95416316 -50172972 - AluSx SINE Alu -15 297 1 9510 194 94 61 chr10 95416316 95417520 -50171768 - L1MB3 LINE L1 -2237 4182 3019 2103 130 0 3 chr10 95417520 95417813 -50171475 - AluSx SINE Alu -20 292 1 9510 194 94 61 chr10 95417813 95420008 -50169280 - L1MB3 LINE L1 -3400 3019 454 207 0 0 0 chr10 95420008 95420031 -50169257 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 9510 194 94 61 chr10 95420031 95420471 -50168817 - L1MB3 LINE L1 -5965 454 30 2301 98 0 16 chr10 95420480 95420785 -50168503 - AluSx SINE Alu -12 300 1 329 276 11 0 chr10 95422069 95422156 -50167132 - LTR67 LTR ERVL -9 548 461 397 272 155 48 chr10 95422647 95423227 -50166061 - L1MC4a LINE L1 -1887 5921 5280 2250 120 0 0 chr10 95423582 95423881 -50165407 - AluSx SINE Alu -13 299 1 873 174 45 25 chr10 95424651 95424852 -50164436 - MER3 DNA MER1_type -4 205 1 24 53 0 0 chr10 95425008 95425046 -50164242 + AT_rich Low_complexity Low_complexity 1 38 0 2076 202 56 31 chr10 95425048 95425121 -50164167 - L1ME1 LINE L1 -5 6161 6091 252 0 0 0 chr10 95425121 95425149 -50164139 + (CA)n Simple_repeat Simple_repeat 2 29 0 2076 202 56 31 chr10 95425149 95425614 -50163674 - L1ME1 LINE L1 -75 6091 5610 2030 201 86 21 chr10 95425612 95426116 -50163172 + L1ME LINE L1 4793 5367 -797 * 2006 141 0 22 chr10 95426116 95426435 -50162853 + AluJb SINE Alu 1 312 0 2030 201 86 21 chr10 95426435 95426676 -50162612 + L1ME LINE L1 5367 5591 -573 338 97 0 68 chr10 95426746 95426849 -50162439 + (TTCC)n Simple_repeat Simple_repeat 1 96 0 2134 129 7 3 chr10 95426850 95427160 -50162128 - AluSx SINE Alu -1 311 1 1559 135 61 36 chr10 95427581 95427945 -50161343 + MSTA LTR MaLR 1 375 0 268 333 0 0 chr10 95428178 95428247 -50161041 + L2 LINE L2 3241 3309 -4 638 257 111 24 chr10 95428272 95428650 -50160638 - L1ME LINE L1 -5130 940 530 371 188 50 0 chr10 95429116 95429196 -50160092 - Charlie4 DNA MER1_type -1737 224 141 2948 238 93 18 chr10 95429306 95430326 -50158962 - HAL1 LINE L1 -310 2197 1101 315 221 91 0 chr10 95430326 95430403 -50158885 + MIR SINE MIR 158 241 -21 360 292 58 26 chr10 95430460 95430614 -50158674 + MIR SINE MIR 59 217 -45 346 396 68 43 chr10 95432015 95432454 -50156834 - L2 LINE L2 -12 3260 2811 705 171 1 14 chr10 95433066 95433204 -50156084 - MIR3 SINE MIR -4 204 67 419 318 62 17 chr10 95434571 95434747 -50154541 + MIR SINE MIR 5 188 -74 529 238 53 21 chr10 95435443 95435745 -50153543 - MER46C DNA MER2_type 0 338 2 21 36 0 0 chr10 95435769 95435797 -50153491 + AT_rich Low_complexity Low_complexity 1 28 0 382 312 45 0 chr10 95436419 95436573 -50152715 + MIR SINE MIR 102 262 0 21 36 0 0 chr10 95436804 95436832 -50152456 + AT_rich Low_complexity Low_complexity 1 28 0 541 328 162 54 chr10 95437224 95437910 -50151378 + L3 LINE CR1 151 910 -667 1206 180 18 26 chr10 95438925 95439197 -50150091 - L1MA9 LINE L1 0 6312 6043 2391 74 0 13 chr10 95440256 95440554 -50148734 + AluSc SINE Alu 1 294 -15 180 328 31 0 chr10 95443242 95443306 -50145982 - MIR SINE MIR -122 140 75 2263 97 6 28 chr10 95444897 95445216 -50144072 - AluSx SINE Alu 0 312 1 23 54 0 0 chr10 95445263 95445300 -50143988 + AT_rich Low_complexity Low_complexity 1 37 0 213 305 12 12 chr10 95445665 95445747 -50143541 - MIR3 SINE MIR -6 202 121 1626 168 0 11 chr10 95445754 95446016 -50143272 + AluJb SINE Alu 1 259 -53 936 282 89 58 chr10 95446285 95446678 -50142610 - MLT1K LTR MaLR -10 578 174 388 279 106 31 chr10 95447580 95447806 -50141482 + L1M4 LINE L1 2266 2508 -3638 6030 143 87 5 chr10 95447873 95448978 -50140310 + Tigger3b DNA MER2_type 1 1196 -35 22 56 0 0 chr10 95449018 95449054 -50140234 + AT_rich Low_complexity Low_complexity 1 36 0 23 86 0 0 chr10 95449172 95449230 -50140058 + AT_rich Low_complexity Low_complexity 1 58 0 419 233 42 8 chr10 95450546 95450666 -50138622 + MIR SINE MIR 127 250 -12 22 0 0 0 chr10 95451672 95451694 -50137594 + AT_rich Low_complexity Low_complexity 1 22 0 1232 173 82 8 chr10 95451781 95451898 -50137390 + AluSx SINE Alu 1 108 -204 219 69 0 0 chr10 95451898 95451927 -50137361 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 1232 173 82 8 chr10 95451927 95452064 -50137224 + AluSx SINE Alu 108 274 -38 911 92 46 7 chr10 95452799 95452952 -50136336 - Tigger2 DNA MER2_type -99 2619 2461 3917 146 44 37 chr10 95453009 95453202 -50136086 - Tigger2 DNA MER2_type -1965 753 563 2301 107 0 0 chr10 95453202 95453512 -50135776 + AluSg SINE Alu 1 310 0 3917 146 44 37 chr10 95453512 95454066 -50135222 - Tigger2 DNA MER2_type -2155 563 1 1927 133 10 3 chr10 95454249 95454550 -50134738 + AluSx SINE Alu 1 303 -9 2661 35 3 0 chr10 95455570 95455880 -50133408 + AluY SINE Alu 1 311 0 208 200 0 55 chr10 95456000 95456055 -50133233 - MIR SINE MIR -74 188 137 2078 111 10 7 chr10 95456319 95456617 -50132671 - AluSx SINE Alu -13 299 1 385 303 50 0 chr10 95458381 95458480 -50130808 + MIR SINE MIR 45 148 -60 1980 155 3 0 chr10 95459060 95459370 -50129918 + AluSx SINE Alu 1 311 -1 2117 115 3 3 chr10 95459538 95459825 -50129463 + AluSx SINE Alu 6 292 -20 734 225 91 0 chr10 95460766 95460953 -50128335 - L1PB4 LINE L1 0 6156 5953 1809 135 123 76 chr10 95460971 95461378 -50127910 - MSTB LTR MaLR 0 426 1 208 143 36 0 chr10 95462179 95462235 -50127053 + (TA)n Simple_repeat Simple_repeat 1 58 0 22 0 0 0 chr10 95462829 95462851 -50126437 + AT_rich Low_complexity Low_complexity 1 22 0 254 167 0 0 chr10 95463977 95464025 -50125263 - AluJo SINE Alu 0 302 255 1078 164 0 33 chr10 95464025 95464208 -50125080 - AluJo SINE Alu -135 177 1 2259 92 3 10 chr10 95464421 95464725 -50124563 + AluSq SINE Alu 2 303 -10 21 57 0 0 chr10 95466408 95466443 -50122845 + AT_rich Low_complexity Low_complexity 1 35 0 207 100 0 0 chr10 95466452 95466482 -50122806 + (T)n Simple_repeat Simple_repeat 1 30 0 478 333 125 14 chr10 95467050 95467347 -50121941 + L2 LINE L2 2633 2962 -352 1919 128 3 24 chr10 95467802 95468092 -50121196 + AluSx SINE Alu 20 303 -9 360 0 0 0 chr10 95468097 95468137 -50121151 + (CA)n Simple_repeat Simple_repeat 2 41 0 213 39 0 0 chr10 95468158 95468184 -50121104 + (TATG)n Simple_repeat Simple_repeat 2 27 0 2556 97 78 0 chr10 95468301 95468712 -50120576 - L1MA5 LINE L1 -4 6296 5854 560 346 100 7 chr10 95468876 95469156 -50120132 - L2 LINE L2 -149 3164 2859 336 251 100 125 chr10 95469170 95469481 -50119807 - L2 LINE L2 -557 2757 2455 418 303 101 35 chr10 95469508 95469706 -50119582 + MIR SINE MIR 2 212 -50 1692 160 44 4 chr10 95469854 95470129 -50119159 + AluJb SINE Alu 1 286 -26 243 0 0 0 chr10 95470129 95470156 -50119132 + (CA)n Simple_repeat Simple_repeat 2 28 0 1852 156 10 7 chr10 95470344 95470645 -50118643 + AluSx SINE Alu 1 302 -10 234 0 0 0 chr10 95472496 95472522 -50116766 + (T)n Simple_repeat Simple_repeat 1 26 0 190 56 56 0 chr10 95473445 95473481 -50115807 + (TA)n Simple_repeat Simple_repeat 1 38 0 189 0 0 0 chr10 95474505 95474526 -50114762 + (A)n Simple_repeat Simple_repeat 1 21 0 257 280 0 42 chr10 95475909 95476027 -50113261 - L1ME4a LINE L1 -78 6043 5931 44 0 0 0 chr10 95476786 95476830 -50112458 + AT_rich Low_complexity Low_complexity 1 44 0 228 35 0 0 chr10 95477147 95477176 -50112112 + (TG)n Simple_repeat Simple_repeat 1 29 0 415 287 132 15 chr10 95477534 95477670 -50111618 - L2 LINE L2 -5 3267 3116 393 228 126 120 chr10 95477747 95478072 -50111216 + MLT1I LTR MaLR 83 409 0 627 248 120 12 chr10 95478193 95478443 -50110845 - L2 LINE L2 -16 3297 3021 232 250 130 40 chr10 95480663 95480763 -50108525 - MIR SINE MIR -113 149 41 1680 170 7 11 chr10 95480831 95481114 -50108174 + AluJo SINE Alu 1 282 -30 226 365 45 13 chr10 95481568 95481724 -50107564 - L2 LINE L2 -336 2977 2817 1012 180 12 55 chr10 95481782 95482037 -50107251 - Charlie1 DNA MER1_type -525 2236 1993 1158 261 79 69 chr10 95482197 95482880 -50106408 + L1ME LINE L1 271 960 -5110 535 308 71 5 chr10 95483676 95483874 -50105414 - MIR SINE MIR -47 215 5 740 177 190 4 chr10 95483953 95484179 -50105109 - Charlie1 DNA MER1_type -5 2756 2489 2205 94 20 3 chr10 95484191 95484488 -50104800 - AluSx SINE Alu -9 303 2 814 179 12 24 chr10 95484489 95484657 -50104631 - Charlie1 DNA MER1_type -683 2078 1913 357 375 73 43 chr10 95484742 95485070 -50104218 + L3 LINE CR1 46 383 -1194 515 331 23 17 chr10 95485339 95485511 -50103777 + MIR3 SINE MIR 3 175 -33 1278 153 27 97 chr10 95485598 95485837 -50103451 + MER33 DNA MER1_type 1 188 -2397 1782 168 0 3 chr10 95485837 95486123 -50103165 - AluJb SINE Alu -17 295 11 1278 153 27 97 chr10 95486123 95486247 -50103041 + MER33 DNA MER1_type 188 319 -5 389 236 81 32 chr10 95486609 95486732 -50102556 + MIR SINE MIR 17 145 -117 1628 188 0 11 chr10 95487287 95487596 -50101692 - AluSx SINE Alu 0 306 1 2099 126 0 3 chr10 95487813 95488115 -50101173 - AluSq SINE Alu -12 301 1 21 36 0 0 chr10 95488470 95488498 -50100790 + AT_rich Low_complexity Low_complexity 1 28 0 1051 322 109 44 chr10 95488521 95488686 -50100602 + L2 LINE L2 734 887 -2427 2820 16 0 0 chr10 95488686 95488997 -50100291 - AluYa5 SINE Alu 0 311 1 1051 322 109 44 chr10 95488997 95489715 -50099573 + L2 LINE L2 887 1674 -1640 5630 188 23 46 chr10 95489937 95491066 -50098222 + L1MC1 LINE L1 3938 5091 -1242 2278 112 0 0 chr10 95491066 95491369 -50097919 + AluSx SINE Alu 1 303 -9 5630 188 23 46 chr10 95491369 95492698 -50096590 + L1MC1 LINE L1 5091 6333 0 1177 262 93 39 chr10 95492692 95493275 -50096013 + L1MEc LINE L1 859 1498 -4898 * 522 216 49 166 chr10 95493275 95493533 -50095755 - MLT1A1 LTR MaLR -2 363 169 2322 104 0 16 chr10 95493533 95493850 -50095438 + AluSx SINE Alu 1 312 0 522 216 49 166 chr10 95493850 95494002 -50095286 - MLT1A1 LTR MaLR -196 169 1 1177 262 93 39 chr10 95494002 95494213 -50095075 + L1MEc LINE L1 1498 1696 -4700 323 265 59 0 chr10 95494214 95494316 -50094972 + L1MEc LINE L1 1731 1838 -4558 1702 219 26 78 chr10 95494334 95494873 -50094415 - MLT2B1 LTR ERVL 0 520 10 1434 155 4 12 chr10 95494877 95495122 -50094166 - MLT2D LTR ERVL -171 243 1 1880 222 39 41 chr10 95495122 95495379 -50093909 + L1MEc LINE L1 1855 2111 -4104 1994 145 0 7 chr10 95495379 95495676 -50093612 + AluJo SINE Alu 2 296 -16 1880 222 39 41 chr10 95495676 95496221 -50093067 + L1MEc LINE L1 2111 2614 -3601 2244 116 7 0 chr10 95496437 95496747 -50092541 - AluSx SINE Alu 0 312 1 1543 192 96 3 chr10 95496994 95497359 -50091929 - L1MB7 LINE L1 -19 6165 5767 2404 64 0 16 chr10 95497870 95498183 -50091105 + AluSc SINE Alu 1 308 -1 1292 247 142 32 chr10 95498646 95499303 -50089985 - HAL1 LINE L1 -154 2353 1625 1881 106 18 18 chr10 95499321 95499594 -50089694 + AluSx SINE Alu 22 294 -18 258 275 14 0 chr10 95499745 95499814 -50089474 - MIR SINE MIR -27 235 166 830 221 46 173 chr10 95499886 95500476 -50088812 - HAL1 LINE L1 -981 1526 1063 2189 113 3 10 chr10 95500476 95500787 -50088501 - AluSc SINE Alu 0 309 1 830 221 46 173 chr10 95500787 95500998 -50088290 - HAL1 LINE L1 -1444 1063 827 1160 279 179 21 chr10 95501341 95502015 -50087273 + L2 LINE L2 1976 2756 -558 2057 145 3 3 chr10 95502154 95502464 -50086824 - AluSx SINE Alu -2 310 1 1644 172 21 7 chr10 95502702 95502993 -50086295 - AluJo SINE Alu -14 298 4 342 384 23 0 chr10 95503397 95503530 -50085758 + HAL1b LINE L1 59 194 -1154 2611 144 58 15 chr10 95503783 95504193 -50085095 - MSTA LTR MaLR 0 428 1 11127 140 7 2 chr10 95504238 95506697 -50082591 + L1PA10 LINE L1 3700 6166 -2 312 295 50 45 chr10 95507003 95507203 -50082085 + L1M4c LINE L1 2276 2476 -3908 258 273 0 81 chr10 95507245 95507344 -50081944 - L2 LINE L2 0 3313 3223 2430 89 0 0 chr10 95507711 95508014 -50081274 - AluSq SINE Alu -10 303 1 336 286 99 22 chr10 95508082 95508264 -50081024 + L1ME4a LINE L1 5917 6112 -9 31 26 0 0 chr10 95508270 95508308 -50080980 + AT_rich Low_complexity Low_complexity 1 38 0 340 230 67 52 chr10 95508719 95508854 -50080434 + MIR SINE MIR 10 146 -116 231 229 0 0 chr10 95508902 95508963 -50080325 + (TA)n Simple_repeat Simple_repeat 1 61 0 287 256 132 33 chr10 95509034 95509155 -50080133 - L2 LINE L2 0 3313 3181 1795 157 3 23 chr10 95510522 95510828 -50078460 + AluJb SINE Alu 6 305 -7 238 53 84 95 chr10 95511000 95511095 -50078193 + (TATAA)n Simple_repeat Simple_repeat 5 98 0 335 180 11 0 chr10 95511114 95511194 -50078094 + (TA)n Simple_repeat Simple_repeat 2 85 -6 2521 68 3 3 chr10 95511194 95511503 -50077785 - AluY SINE Alu -2 309 1 335 180 11 0 chr10 95511503 95511511 -50077777 + (TA)n Simple_repeat Simple_repeat 85 91 0 272 283 0 0 chr10 95511562 95511661 -50077627 + (TA)n Simple_repeat Simple_repeat 2 100 0 212 349 87 35 chr10 95511844 95512016 -50077272 - L2 LINE L2 -337 2977 2797 693 161 0 0 chr10 95512741 95512865 -50076423 - L1MA3 LINE L1 0 6305 6182 2099 122 19 86 chr10 95512884 95513216 -50076072 + L1MA3 LINE L1 5735 6088 -217 2139 117 0 3 chr10 95513216 95513506 -50075782 + AluSx SINE Alu 1 289 -23 2099 122 19 86 chr10 95513506 95513555 -50075733 + L1MA3 LINE L1 6088 6088 -217 2388 91 3 0 chr10 95513555 95513853 -50075435 - AluSp SINE Alu -14 299 1 2099 122 19 86 chr10 95513853 95513887 -50075401 + L1MA3 LINE L1 6088 6123 -182 1332 155 5 14 chr10 95513888 95514101 -50075187 + AluJo SINE Alu 87 297 -15 309 334 107 24 chr10 95514139 95514439 -50074849 - L2 LINE L2 -224 3048 2712 204 125 0 0 chr10 95514439 95514471 -50074817 + (CTCA)n Simple_repeat Simple_repeat 4 35 0 696 232 45 17 chr10 95514541 95514718 -50074570 + MLT1J1 LTR MaLR 3 184 -262 361 263 20 40 chr10 95514973 95515125 -50074163 - L2 LINE L2 -734 2580 2432 1716 171 10 20 chr10 95515210 95515503 -50073785 - AluJo SINE Alu -22 290 1 2447 88 0 0 chr10 95515965 95516273 -50073015 - AluSx SINE Alu -4 308 1 487 248 15 29 chr10 95516362 95516499 -50072789 - L2 LINE L2 -4 3309 3175 249 298 138 11 chr10 95516505 95516686 -50072602 - L2 LINE L2 -1303 2011 1808 1577 198 75 37 chr10 95516686 95516987 -50072301 - MLT1A1 LTR MaLR 0 365 48 2776 98 14 6 chr10 95516987 95517345 -50071943 + THE1B LTR MaLR 4 364 0 1577 198 75 37 chr10 95517345 95517391 -50071897 - MLT1A1 LTR MaLR -317 48 5 323 250 115 31 chr10 95517996 95518092 -50071196 + MER91A DNA MER1_type 23 126 -70 800 171 0 0 chr10 95518115 95518238 -50071050 - FLAM_C SINE Alu -20 123 1 830 150 100 61 chr10 95519110 95519214 -50070074 - MER5A DNA MER1_type -1 188 73 2417 89 0 0 chr10 95519214 95519518 -50069770 - AluSx SINE Alu -8 304 1 830 150 100 61 chr10 95519518 95519593 -50069695 - MER5A DNA MER1_type -116 73 2 314 275 84 40 chr10 95520185 95520471 -50068817 - L1MC/D LINE L1 -644 5520 5282 2394 89 0 3 chr10 95520824 95521127 -50068161 - AluSg SINE Alu -8 302 1 592 129 0 0 chr10 95521245 95521330 -50067958 + AluSg/x SINE Alu 216 300 -12 183 42 0 0 chr10 95521395 95521419 -50067869 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 1539 173 7 53 chr10 95521419 95521719 -50067569 - AluJo SINE Alu -26 286 1 2345 166 73 14 chr10 95521806 95522233 -50067055 - LTR47A LTR ERVL 0 452 1 379 277 129 86 chr10 95522248 95522653 -50066635 - L1MC/D LINE L1 -1624 4522 4079 1713 180 7 0 chr10 95522653 95522948 -50066340 - AluJo SINE Alu -13 299 3 379 277 129 86 chr10 95522948 95523170 -50066118 - L1MC/D LINE L1 -2067 4079 3868 319 274 58 62 chr10 95523709 95523795 -50065493 - L1P LINE L1 -1861 4285 4200 1806 161 20 7 chr10 95523795 95524094 -50065194 + AluJb SINE Alu 1 303 -9 319 274 58 62 chr10 95524094 95524393 -50064895 - L1P LINE L1 -1946 4200 3899 2066 150 3 0 chr10 95525638 95525945 -50063343 - AluSx SINE Alu -2 310 3 183 375 28 45 chr10 95526932 95527108 -50062180 - L2 LINE L2 -249 3023 2851 1451 185 21 28 chr10 95527313 95527625 -50061663 + AluJo SINE Alu 1 310 0 207 217 22 0 chr10 95527793 95527839 -50061449 + GA-rich Low_complexity Low_complexity 2 48 0 2657 184 32 100 chr10 95528984 95529371 -50059917 + L1MA9 LINE L1 5601 5918 -394 1721 164 49 7 chr10 95529371 95529657 -50059631 + AluJb SINE Alu 5 302 -10 2657 184 32 100 chr10 95529657 95529991 -50059297 + L1MA9 LINE L1 5918 6273 -39 226 229 28 73 chr10 95530362 95530471 -50058817 - MLT1L LTR MaLR 0 615 512 336 260 68 61 chr10 95530625 95530840 -50058448 - MLT1J LTR MaLR -310 201 3 538 278 7 21 chr10 95530857 95531001 -50058287 - MIR SINE MIR -120 142 1 889 315 78 50 chr10 95531253 95532205 -50057083 + L2 LINE L2 2339 3313 0 2515 74 0 0 chr10 95532298 95532609 -50056679 + AluY SINE Alu 1 311 0 2442 90 0 0 chr10 95532615 95532926 -50056362 + AluSq SINE Alu 1 311 -2 1061 265 121 17 chr10 95533707 95534062 -50055226 - MLT1J2 LTR MaLR -58 392 1 205 304 98 20 chr10 95534063 95534165 -50055123 - MIR SINE MIR -150 112 3 28 61 0 0 chr10 95534185 95534234 -50055054 + AT_rich Low_complexity Low_complexity 1 49 0 1325 263 116 11 chr10 95534654 95535118 -50054170 + HsTC2 DNA Tc2 1 513 -1385 2392 63 40 0 chr10 95535138 95535437 -50053851 - AluY SINE Alu 0 311 1 1251 224 139 5 chr10 95535439 95535832 -50053456 + HsTC2 DNA Tc2 1283 1892 -6 2325 90 7 0 chr10 95537006 95537305 -50051983 - AluSp SINE Alu -12 301 1 393 291 110 53 chr10 95537561 95537788 -50051500 - L1ME4a LINE L1 -259 5862 5623 711 284 65 60 chr10 95538268 95538684 -50050604 - MARNA DNA Mariner -44 542 125 1832 161 44 0 chr10 95539021 95539338 -50049950 - L1MC1 LINE L1 -1 6332 6002 744 286 88 28 chr10 95539362 95539726 -50049562 - LTR16A LTR ERVL -6 444 59 590 276 73 0 chr10 95539780 95540026 -50049262 - L1ME4a LINE L1 -183 5938 5675 1934 150 7 0 chr10 95540144 95540450 -50048838 + AluSx SINE Alu 1 308 -4 420 227 82 0 chr10 95540472 95540569 -50048719 - MIR SINE MIR -68 194 90 357 303 73 6 chr10 95540643 95540808 -50048480 - L1ME4a LINE L1 -452 5669 5494 235 309 21 11 chr10 95541634 95541728 -50047560 + MIR SINE MIR 159 253 -9 408 285 7 49 chr10 95541799 95541943 -50047345 + MIR SINE MIR 110 247 -15 529 95 0 0 chr10 95542076 95542150 -50047138 - L1MA9 LINE L1 -6 6306 6233 2004 166 3 18 chr10 95542150 95542488 -50046800 + MER44D DNA MER2_type 2 604 -5 1948 185 57 5 chr10 95542491 95542897 -50046391 - L1MA9 LINE L1 -75 6237 5811 228 284 0 0 chr10 95542994 95543068 -50046220 + T-rich Low_complexity Low_complexity 1 74 0 1542 143 9 5 chr10 95543813 95544036 -50045252 - MER58A DNA MER1_type 0 224 1 1166 182 82 46 chr10 95544206 95544486 -50044802 - MLT1C LTR MaLR -3 464 175 2164 135 0 6 chr10 95544487 95544799 -50044489 - AluSx SINE Alu -1 311 2 1010 104 8 0 chr10 95544800 95544934 -50044354 - AluSq/x SINE Alu -178 135 1 716 202 81 35 chr10 95544934 95545107 -50044181 - MLT1C LTR MaLR -209 181 1 209 365 27 64 chr10 95545224 95545443 -50043845 - L2 LINE L2 -258 3014 2804 521 263 95 11 chr10 95545760 95545939 -50043349 - MIR SINE MIR 0 262 69 2251 84 0 3 chr10 95546299 95546615 -50042673 + AluSg SINE Alu 1 315 0 842 275 168 38 chr10 95548708 95549372 -50039916 - L2 LINE L2 -2 3311 2560 2176 128 0 0 chr10 95549491 95549789 -50039499 - AluSx SINE Alu -10 302 5 975 177 0 0 chr10 95550114 95550272 -50039016 - AluJb SINE Alu -10 302 145 875 193 132 95 chr10 95550272 95550650 -50038638 - LTR37B LTR ERV1 -68 400 9 481 282 94 88 chr10 95550793 95551112 -50038176 - L2 LINE L2 0 3272 2952 287 250 14 0 chr10 95552106 95552178 -50037110 + (ATGGTG)n Simple_repeat Simple_repeat 4 76 0 385 175 234 22 chr10 95552179 95552316 -50036972 - MIR SINE MIR -5 257 92 1459 128 70 16 chr10 95552447 95552689 -50036599 + L1PA16 LINE L1 5903 6157 -9 368 169 0 62 chr10 95553314 95553444 -50035844 + T-rich Low_complexity Low_complexity 2 123 0 3140 197 119 12 chr10 95554254 95554443 -50034845 + MER99 DNA DNA 3 170 -658 1431 126 63 0 chr10 95554443 95554665 -50034623 - MER46A DNA MER2_type 0 236 1 3140 197 119 12 chr10 95554665 95555220 -50034068 + MER99 DNA DNA 170 827 -1 2266 114 0 25 chr10 95555445 95555760 -50033528 + AluSg SINE Alu 1 307 -3 339 246 254 0 chr10 95555921 95556039 -50033249 + MIR SINE MIR 40 187 -75 415 271 0 112 chr10 95556733 95556875 -50032413 + MIR SINE MIR 73 185 -77 832 182 6 6 chr10 95556875 95557040 -50032248 + L1MB3 LINE L1 6017 6181 -2 415 271 0 112 chr10 95557040 95557111 -50032177 + MIR SINE MIR 185 262 0 236 283 250 13 chr10 95558212 95558364 -50030924 - MIR SINE MIR -62 200 13 534 301 143 0 chr10 95558629 95558832 -50030456 + MIR SINE MIR 15 246 -16 2028 144 3 10 chr10 95558940 95559245 -50030043 - AluJb SINE Alu -9 303 1 409 318 153 50 chr10 95559249 95559570 -50029718 - L2 LINE L2 -1 3271 2918 283 265 162 15 chr10 95560142 95560278 -50029010 + MIR SINE MIR 102 257 -5 413 272 67 84 chr10 95560315 95560554 -50028734 + MIR SINE MIR 23 257 -5 419 255 110 7 chr10 95560565 95560710 -50028578 - MIR SINE MIR -25 237 78 2867 13 0 0 chr10 95560756 95561062 -50028226 + AluYa5 SINE Alu 1 306 -5 205 29 29 29 chr10 95561268 95561303 -50027985 + (CAA)n Simple_repeat Simple_repeat 2 36 0 213 270 34 22 chr10 95561443 95561532 -50027756 - MIR3 SINE MIR -36 172 83 265 203 38 0 chr10 95561692 95561771 -50027517 + L1ME4a LINE L1 6038 6119 -2 1723 158 47 7 chr10 95561796 95561955 -50027333 - AluJo SINE Alu -22 290 114 189 0 0 0 chr10 95561955 95561976 -50027312 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 1723 158 47 7 chr10 95561976 95562095 -50027193 - AluJo SINE Alu -198 114 1 603 306 128 34 chr10 95562568 95562983 -50026305 - L2 LINE L2 0 3313 2860 585 230 7 14 chr10 95563022 95563170 -50026118 + L2 LINE L2 3167 3313 0 517 326 79 21 chr10 95563144 95563524 -50025764 - L2 LINE L2 -416 2898 2497 * 205 152 43 0 chr10 95563580 95563626 -50025662 + (TATAA)n Simple_repeat Simple_repeat 3 50 0 605 270 72 98 chr10 95563669 95564087 -50025201 + MLT1J LTR MaLR 105 511 0 264 158 0 0 chr10 95564193 95564250 -50025038 + (TG)n Simple_repeat Simple_repeat 2 58 0 417 20 0 0 chr10 95564250 95564300 -50024988 + (GA)n Simple_repeat Simple_repeat 1 50 0 833 272 34 45 chr10 95564304 95564657 -50024631 - L2 LINE L2 -945 2369 2021 272 287 74 25 chr10 95565425 95565547 -50023741 - L2 LINE L2 -1 3271 3144 312 325 153 0 chr10 95565656 95565813 -50023475 + MER5A DNA MER1_type 9 189 0 443 263 26 0 chr10 95565831 95565945 -50023343 - L2 LINE L2 -263 3050 2934 440 192 0 0 chr10 95566092 95566165 -50023123 - AluJ/FLAM SINE Alu -238 74 2 2035 134 0 26 chr10 95566217 95566522 -50022766 + AluSx SINE Alu 1 297 -15 1109 146 0 55 chr10 95567780 95568000 -50021288 + AluSx SINE Alu 1 208 -104 337 202 42 92 chr10 95568403 95568522 -50020766 - L2 LINE L2 0 3313 3201 288 56 0 0 chr10 95568553 95568589 -50020699 + tRNA-Gly-GGC tRNA tRNA 1 36 -38 2901 29 3 20 chr10 95568669 95569019 -50020269 - L1PA4 LINE L1 -1 6154 5811 276 170 0 21 chr10 95569076 95569123 -50020165 + Alu SINE Alu 2 47 -252 842 64 0 0 chr10 95569631 95569741 -50019547 + L1PA13 LINE L1 6051 6160 -3 183 80 0 0 chr10 95569764 95569789 -50019499 + (GAAAA)n Simple_repeat Simple_repeat 1 25 0 1793 167 17 0 chr10 95569880 95570167 -50019121 - AluSx SINE Alu -19 293 2 354 296 93 21 chr10 95570866 95571200 -50018088 + L1MC4 LINE L1 7103 7460 -582 281 256 93 58 chr10 95571214 95571386 -50017902 + L1MC5 LINE L1 7311 7488 -473 778 254 71 36 chr10 95572652 95573045 -50016243 + L1MC4 LINE L1 6656 7062 -980 1554 194 38 10 chr10 95573070 95573359 -50015929 + AluJb SINE Alu 1 297 -15 289 267 57 9 chr10 95573386 95573491 -50015797 + L1MC5 LINE L1 6971 7080 -881 2137 115 31 0 chr10 95574555 95574842 -50014446 - AluSx SINE Alu -16 296 1 188 299 120 43 chr10 95575054 95575171 -50014117 - L2 LINE L2 -1 3312 3187 214 259 19 0 chr10 95575433 95575487 -50013801 + MIR3 SINE MIR 143 197 -11 538 261 0 13 chr10 95576622 95576779 -50012509 - MIR SINE MIR -45 217 63 475 243 54 43 chr10 95577480 95577665 -50011623 - MIR SINE MIR -55 207 21 252 299 41 21 chr10 95578641 95578738 -50010550 + L2 LINE L2 3173 3271 -1 299 300 50 17 chr10 95580038 95580158 -50009130 - MIR SINE MIR -21 241 118 24 0 0 0 chr10 95580161 95580185 -50009103 + AT_rich Low_complexity Low_complexity 1 24 0 1244 250 35 11 chr10 95580798 95581294 -50007994 - L2 LINE L2 -99 3214 2711 1454 236 25 33 chr10 95581546 95581911 -50007377 - MLT1D LTR MaLR -138 367 6 257 267 57 29 chr10 95582268 95582373 -50006915 + L2 LINE L2 3191 3298 -15 1538 218 65 43 chr10 95582740 95583232 -50006056 - MLT1D LTR MaLR -2 503 1 291 301 24 112 chr10 95584010 95584306 -50004982 + L2 LINE L2 2917 3186 -86 2128 112 53 45 chr10 95585784 95586141 -50003147 + MER46B DNA MER2_type 1 235 -1 182 273 121 45 chr10 95586219 95586351 -50002937 + MIR SINE MIR 110 251 -11 191 310 23 35 chr10 95586547 95586634 -50002654 + L3 LINE CR1 1487 1572 -5 492 214 10 0 chr10 95586661 95586759 -50002529 + MER94 DNA DNA 2 100 -34 209 309 25 0 chr10 95587625 95587706 -50001582 - MIR3 SINE MIR -39 169 87 923 239 49 4 chr10 95588485 95588732 -50000556 + MIR SINE MIR 2 259 -3 280 185 31 0 chr10 95588867 95588932 -50000356 - L1ME4a LINE L1 -3 6118 6052 406 289 7 30 chr10 95590108 95590243 -49999045 - MER94 DNA DNA 0 134 3 1098 184 18 18 chr10 95591968 95592185 -49997103 - MER20 DNA MER1_type -1 218 2 423 92 35 0 chr10 95592462 95592549 -49996739 + (TA)n Simple_repeat Simple_repeat 2 91 0 855 231 129 55 chr10 95592580 95593009 -49996279 - MLT1H LTR MaLR 0 549 36 2557 214 87 31 chr10 95593977 95594630 -49994658 + L1ME1 LINE L1 5444 6133 -33 1379 243 102 8 chr10 95594933 95595406 -49993882 + Charlie8 DNA MER1_type 26 542 -1875 283 228 0 0 chr10 95595408 95595465 -49993823 + Charlie8 DNA MER1_type 1353 1409 -1008 225 0 0 0 chr10 95595633 95595658 -49993630 + (TG)n Simple_repeat Simple_repeat 1 25 0 198 0 0 0 chr10 95595657 95595679 -49993609 + (GA)n Simple_repeat Simple_repeat 1 22 0 * 508 182 230 7 chr10 95595774 95595922 -49993366 - MER5A DNA MER1_type 0 189 9 1195 198 84 27 chr10 95596728 95596989 -49992299 - Charlie5 DNA MER1_type -1 2623 2378 1964 153 7 3 chr10 95596989 95597289 -49991999 + AluSg SINE Alu 1 301 -9 279 0 0 0 chr10 95597289 95597320 -49991968 + (GA)n Simple_repeat Simple_repeat 2 32 0 1195 198 84 27 chr10 95597320 95597426 -49991862 - Charlie5 DNA MER1_type -245 2379 2234 414 154 54 131 chr10 95597429 95597559 -49991729 - MER3 DNA MER1_type -41 168 49 265 299 25 45 chr10 95597877 95598034 -49991254 - L2 LINE L2 0 3313 3160 259 315 173 0 chr10 95598231 95598393 -49990895 - L2 LINE L2 -421 2893 2704 256 344 33 56 chr10 95598783 95598841 -49990447 - MIR SINE MIR -59 203 145 3698 121 8 59 chr10 95598841 95599486 -49989802 - LTR9 LTR ERV1 0 612 1 256 344 33 56 chr10 95599486 95599607 -49989681 - MIR SINE MIR -117 145 28 274 299 11 0 chr10 95600307 95600394 -49988894 - L2 LINE L2 -1 3312 3225 1394 255 129 8 chr10 95600431 95601090 -49988198 - L2 LINE L2 -78 3235 2493 2237 117 0 0 chr10 95601204 95601502 -49987786 - AluSx SINE Alu -14 298 1 233 266 47 0 chr10 95601737 95601801 -49987487 - L1MC/D LINE L1 -1928 5880 5814 219 325 43 74 chr10 95603223 95603546 -49985742 - L2 LINE L2 -86 3227 2915 414 308 16 39 chr10 95604256 95604438 -49984850 + MER5B DNA MER1_type 1 178 0 698 265 34 25 chr10 95605483 95605709 -49983579 - MIR SINE MIR -4 258 37 583 279 40 21 chr10 95606431 95606646 -49982642 + MIR SINE MIR 1 214 -48 612 251 31 78 chr10 95606678 95606727 -49982561 - MIR SINE MIR -5 257 207 1220 151 28 14 chr10 95606727 95606939 -49982349 + MER20 DNA MER1_type 1 215 -4 612 251 31 78 chr10 95606939 95607144 -49982144 - MIR SINE MIR -55 207 15 320 255 19 38 chr10 95607224 95607330 -49981958 - MER5A DNA MER1_type 0 189 86 209 297 76 51 chr10 95607965 95608083 -49981205 - L2 LINE L2 0 3272 3152 299 339 90 34 chr10 95608171 95608348 -49980940 + L2 LINE L2 2914 3100 -172 744 288 49 5 chr10 95608745 95608950 -49980338 - MIR SINE MIR -3 259 46 23 0 0 0 chr10 95609640 95609663 -49979625 + AT_rich Low_complexity Low_complexity 1 23 0 313 245 5 132 chr10 95610328 95610449 -49978839 - MLT1J LTR MaLR -171 444 241 287 104 21 0 chr10 95610504 95610552 -49978736 + (ATGTG)n Simple_repeat Simple_repeat 4 52 0 650 292 53 53 chr10 95610648 95611008 -49978280 - MLT1I LTR MaLR -4 405 46 426 372 35 42 chr10 95611106 95611391 -49977897 - L2 LINE L2 -9 3263 2981 365 305 152 20 chr10 95611430 95611581 -49977707 + MIR3 SINE MIR 37 207 -1 2025 130 27 14 chr10 95611835 95612128 -49977160 - AluSx SINE Alu -15 297 1 632 332 75 4 chr10 95612387 95612628 -49976660 - MIR SINE MIR -4 258 1 621 287 65 95 chr10 95612753 95613258 -49976030 - MLT1K LTR MaLR -95 493 4 497 279 22 62 chr10 95613814 95613993 -49975295 + MIR3 SINE MIR 1 179 -62 3411 144 25 41 chr10 95614750 95615317 -49973971 - L1MB7 LINE L1 -19 6165 5608 207 0 0 0 chr10 95615317 95615340 -49973948 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 3411 144 25 41 chr10 95615340 95615409 -49973879 - L1MB7 LINE L1 -576 5608 5539 25 0 0 0 chr10 95615409 95615434 -49973854 + AT_rich Low_complexity Low_complexity 1 25 0 218 349 48 0 chr10 95615537 95615620 -49973668 - L2 LINE L2 0 3313 3227 233 369 78 10 chr10 95615650 95615753 -49973535 + L3b LINE CR1 1430 1539 -44 247 220 160 70 chr10 95616039 95616139 -49973149 - MIR SINE MIR -70 192 84 21 0 0 0 chr10 95616446 95616467 -49972821 + AT_rich Low_complexity Low_complexity 1 21 0 698 243 81 19 chr10 95617446 95617656 -49971632 - MIR SINE MIR -38 224 2 225 311 67 63 chr10 95617812 95618050 -49971238 + MIR SINE MIR 20 258 -4 278 289 51 66 chr10 95619208 95619405 -49969883 - MLT1J LTR MaLR -92 419 226 334 245 59 10 chr10 95619488 95619590 -49969698 + MIR SINE MIR 74 180 -82 244 270 202 0 chr10 95620047 95620136 -49969152 + L2 LINE L2 3154 3260 -12 555 227 86 25 chr10 95620314 95620477 -49968811 - MIR SINE MIR -16 246 74 507 239 74 61 chr10 95620612 95620775 -49968513 + MIR SINE MIR 88 252 -10 261 231 359 8 chr10 95620816 95620933 -49968355 - MER5B DNA MER1_type -20 158 1 405 299 124 50 chr10 95621210 95621805 -49967483 - L2 LINE L2 -426 2888 2250 238 183 0 117 chr10 95621905 95621965 -49967323 + Charlie4 DNA MER1_type 1 53 -1908 22 0 0 0 chr10 95622177 95622199 -49967089 + AT_rich Low_complexity Low_complexity 1 22 0 5076 160 49 8 chr10 95622247 95622828 -49966460 + L1MB7 LINE L1 4871 5427 -757 183 42 0 0 chr10 95622828 95622852 -49966436 + (CAT)n Simple_repeat Simple_repeat 3 26 0 5076 160 49 8 chr10 95622852 95623519 -49965769 + L1MB7 LINE L1 5427 6168 -16 300 250 147 9 chr10 95623757 95623873 -49965415 - L2 LINE L2 -13 3300 3169 5281 96 1 6 chr10 95624977 95625684 -49963604 - L1PB1 LINE L1 0 6151 5448 238 200 73 18 chr10 95625715 95625770 -49963518 - MER5A DNA MER1_type 0 189 132 2071 150 0 6 chr10 95625775 95626089 -49963199 + AluSx SINE Alu 1 312 0 509 245 32 27 chr10 95626244 95626399 -49962889 + MIR SINE MIR 4 154 -58 249 307 95 69 chr10 95626737 95626926 -49962362 - L2 LINE L2 -4 3268 3075 718 299 83 37 chr10 95627997 95628428 -49960860 + L2 LINE L2 2863 3313 0 382 192 62 62 chr10 95630383 95630513 -49958775 - MIR3 SINE MIR -1 207 78 529 211 10 10 chr10 95632150 95632254 -49957034 - MER81 DNA DNA 0 114 11 475 269 43 0 chr10 95632333 95632474 -49956814 + MIR SINE MIR 92 238 -24 353 267 0 12 chr10 95632876 95632962 -49956326 - L2 LINE L2 -3 3310 3226 496 318 17 6 chr10 95633239 95633415 -49955873 + G-rich Low_complexity Low_complexity 1 178 0 464 273 11 33 chr10 95633393 95633576 -49955712 + GA-rich Low_complexity Low_complexity 1 179 0 * 389 293 60 13 chr10 95634931 95635081 -49954207 - MIR SINE MIR -50 212 56 568 285 17 22 chr10 95635142 95635321 -49953967 - MIR SINE MIR -1 261 84 1986 112 49 43 chr10 95635340 95635687 -49953601 - THE1C LTR MaLR 0 375 27 194 353 0 0 chr10 95635693 95635744 -49953544 - MIR SINE MIR -199 63 13 1696 268 107 20 chr10 95636663 95637301 -49951987 + MER115 DNA AcHobo 1 693 0 212 325 86 26 chr10 95637418 95637535 -49951753 + MIR3 SINE MIR 35 158 -50 380 235 76 0 chr10 95637594 95637713 -49951575 - MER103 DNA DNA -2 164 37 653 249 18 12 chr10 95637727 95637896 -49951392 - MIR SINE MIR -7 255 86 4512 153 37 21 chr10 95638049 95638888 -49950400 + L1MB8 LINE L1 5319 6170 -8 578 324 85 4 chr10 95639131 95639378 -49949910 - L2 LINE L2 -1 3271 3005 194 284 135 35 chr10 95639417 95639558 -49949730 - L2 LINE L2 -448 2866 2712 22 0 0 0 chr10 95639607 95639629 -49949659 + AT_rich Low_complexity Low_complexity 1 22 0 255 245 75 21 chr10 95639637 95639731 -49949557 - L1ME LINE L1 -298 5823 5725 192 77 0 0 chr10 95640002 95640028 -49949260 + (TC)n Simple_repeat Simple_repeat 2 27 0 258 290 0 43 chr10 95640780 95640849 -49948439 + MIR SINE MIR 20 85 -123 317 353 19 29 chr10 95641092 95641299 -49947989 + MIR3 SINE MIR 3 207 -1 201 320 179 34 chr10 95642771 95643005 -49946283 - L2 LINE L2 -1 3271 3004 253 321 12 68 chr10 95643124 95643286 -49946002 - L2 LINE L2 -443 2871 2719 314 289 39 39 chr10 95643296 95643424 -49945864 - L2 LINE L2 -8 3305 3178 2045 97 30 0 chr10 95643670 95643938 -49945350 + AluSc SINE Alu 1 276 -33 234 91 0 0 chr10 95643938 95643971 -49945317 + (CA)n Simple_repeat Simple_repeat 1 33 0 884 284 137 3 chr10 95644109 95644394 -49944894 - LTR16C LTR ERVL -137 354 32 335 347 6 54 chr10 95644503 95644531 -49944757 - MIR SINE MIR -84 178 150 1184 150 9 73 chr10 95644531 95644764 -49944524 + MER20 DNA MER1_type 2 219 0 335 347 6 54 chr10 95644764 95644902 -49944386 - MIR SINE MIR -112 150 20 317 312 227 0 chr10 95646037 95646178 -49943110 - L2 LINE L2 -1 3271 3099 1163 190 117 0 chr10 95646463 95646753 -49942535 + MER5C DNA MER1_type 1 324 0 296 277 200 15 chr10 95646758 95646888 -49942400 + L2 LINE L2 3118 3271 -1 201 154 0 0 chr10 95647289 95647328 -49941960 + (TTCA)n Simple_repeat Simple_repeat 3 41 0 396 321 92 0 chr10 95647331 95647462 -49941826 - L2 LINE L2 -3 3269 3127 331 267 23 0 chr10 95647752 95647838 -49941450 + (CACCAT)n Simple_repeat Simple_repeat 2 89 0 557 320 66 22 chr10 95647844 95648072 -49941216 - MIR SINE MIR -7 255 18 199 326 0 35 chr10 95648165 95648251 -49941037 - L3 LINE CR1 -893 684 602 387 307 13 26 chr10 95648546 95648698 -49940590 - MIR SINE MIR -44 164 14 467 277 35 0 chr10 95649351 95649492 -49939796 + MIR SINE MIR 74 219 -43 210 162 0 0 chr10 95649929 95649966 -49939322 + A-rich Low_complexity Low_complexity 1 37 0 209 305 17 0 chr10 95650712 95650771 -49938517 - L3 LINE CR1 -1 1576 1517 222 118 0 0 chr10 95651301 95651335 -49937953 + (TG)n Simple_repeat Simple_repeat 1 34 0 232 206 44 15 chr10 95651335 95651398 -49937890 + (CATATA)n Simple_repeat Simple_repeat 2 66 0 483 224 15 33 chr10 95651409 95651532 -49937756 - MIR SINE MIR -63 145 71 183 326 232 11 chr10 95651558 95651653 -49937635 - MIR SINE MIR -62 146 31 187 288 17 17 chr10 95652191 95652250 -49937038 - MER5A DNA MER1_type 0 189 131 222 37 0 0 chr10 95652677 95652704 -49936584 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1968 149 3 0 chr10 95652706 95652988 -49936300 - AluSx SINE Alu -29 283 1 200 217 0 0 chr10 95653787 95653833 -49935455 + A-rich Low_complexity Low_complexity 1 46 0 369 270 122 78 chr10 95653896 95654101 -49935187 - L1ME3A LINE L1 -2 6151 5957 195 69 0 0 chr10 95654101 95654130 -49935158 + (CAATA)n Simple_repeat Simple_repeat 1 29 0 369 270 122 78 chr10 95654130 95654439 -49934849 - L1ME3A LINE L1 -196 5957 5614 2758 267 91 24 chr10 95654448 95655762 -49933526 - L1ME3A LINE L1 -575 5570 4104 230 0 33 0 chr10 95655762 95655792 -49933496 + (TTTTC)n Simple_repeat Simple_repeat 4 34 0 2758 267 91 24 chr10 95655792 95656210 -49933078 - L1ME3A LINE L1 -2041 4104 3715 705 269 66 46 chr10 95656239 95656845 -49932443 - L1ME3A LINE L1 -2499 3630 3013 701 225 12 0 chr10 95656852 95657025 -49932263 + MER104 DNA Tc2 1 175 -5 717 262 67 59 chr10 95657090 95657479 -49931809 - L1ME3A LINE L1 -5048 1071 680 334 228 20 0 chr10 95658716 95658817 -49930471 + CT-rich Low_complexity Low_complexity 2 104 0 2189 109 3 0 chr10 95659796 95660089 -49929199 - AluSc SINE Alu -15 294 1 210 333 0 0 chr10 95660223 95660274 -49929014 + L2 LINE L2 3205 3255 -17 435 305 128 0 chr10 95660382 95660585 -49928703 + MIR SINE MIR 34 262 0 281 296 45 61 chr10 95661472 95661604 -49927684 + MIR3 SINE MIR 41 170 -38 2512 109 28 14 chr10 95661623 95661982 -49927306 - THE1B LTR MaLR 0 364 1 413 253 59 35 chr10 95662195 95662403 -49926885 - MIR SINE MIR -1 261 2 475 163 11 11 chr10 95662470 95662562 -49926726 - MIR SINE MIR -71 191 100 235 179 54 0 chr10 95663251 95663307 -49925981 + LTR67 LTR ERVL 499 557 0 278 222 0 0 chr10 95663473 95663527 -49925761 - MER63 DNA MER1_type -24 1038 985 1170 231 43 0 chr10 95663539 95663795 -49925493 + Tigger7 DNA MER2_type 1 267 -466 556 157 0 39 chr10 95663794 95663808 -49925480 + Tigger7 DNA MER2_type 2390 2403 -84 * 2115 128 3 60 chr10 95663808 95664176 -49925112 + MER7A DNA MER2_type 2 346 0 556 157 0 39 chr10 95664176 95664263 -49925025 + Tigger7 DNA MER2_type 2403 2487 0 387 246 82 0 chr10 95664264 95664374 -49924914 - MER63 DNA MER1_type -91 745 1 185 275 38 50 chr10 95664586 95664666 -49924622 + L2 LINE L2 3022 3100 -172 346 242 20 30 chr10 95664705 95664804 -49924484 - MIR SINE MIR -10 252 155 248 269 11 54 chr10 95665139 95665232 -49924056 + L2 LINE L2 2976 3064 -208 213 39 0 0 chr10 95665586 95665612 -49923676 + (TG)n Simple_repeat Simple_repeat 2 27 0 683 344 12 8 chr10 95666746 95666996 -49922292 - MIR SINE MIR -7 255 5 1412 167 0 0 chr10 95667150 95667378 -49921910 + AluJo SINE Alu 82 309 -3 238 255 0 0 chr10 95667712 95667763 -49921525 + L2 LINE L2 3263 3313 0 485 241 135 71 chr10 95668193 95668363 -49920925 - MER5A DNA MER1_type 0 189 9 410 33 50 0 chr10 95669020 95669080 -49920208 - L1MB7 LINE L1 -2 6182 6120 228 154 0 26 chr10 95669439 95669478 -49919810 + MER5A DNA MER1_type 9 46 -143 260 202 37 138 chr10 95670113 95670222 -49919066 + MIR SINE MIR 91 188 -74 537 286 102 15 chr10 95670233 95670429 -49918859 - MIR SINE MIR -4 258 46 189 0 0 0 chr10 95672644 95672665 -49916623 + (CA)n Simple_repeat Simple_repeat 2 22 0 226 129 12 59 chr10 95672676 95672761 -49916527 + (TTA)n Simple_repeat Simple_repeat 3 83 0 254 128 26 26 chr10 95672776 95672854 -49916434 + (TAA)n Simple_repeat Simple_repeat 3 80 0 29 70 0 0 chr10 95672854 95672911 -49916377 + AT_rich Low_complexity Low_complexity 1 57 0 2627 61 0 0 chr10 95673074 95673385 -49915903 + AluY SINE Alu 1 311 0 2618 102 11 3 chr10 95675279 95675640 -49913648 + THE1B LTR MaLR 1 364 0 269 309 50 65 chr10 95675975 95676114 -49913174 + MIR3 SINE MIR 57 193 -15 252 0 0 0 chr10 95676598 95676626 -49912662 + (CA)n Simple_repeat Simple_repeat 2 29 0 266 186 17 0 chr10 95677927 95677986 -49911302 - MER81 DNA DNA 0 114 55 272 256 97 70 chr10 95678106 95678254 -49911034 + MIR SINE MIR 4 156 -52 2394 106 0 0 chr10 95680973 95681309 -49907979 - AluSx SINE Alu 0 336 1 410 336 62 9 chr10 95681309 95681535 -49907753 + MLT1J LTR MaLR 101 338 -173 327 244 12 79 chr10 95681590 95681754 -49907534 - MER104 DNA Tc2 -13 167 15 264 111 0 0 chr10 95682316 95682361 -49906927 + (GA)n Simple_repeat Simple_repeat 1 45 0 22 0 0 0 chr10 95682406 95682428 -49906860 + AT_rich Low_complexity Low_complexity 1 22 0 1144 120 285 69 chr10 95682591 95682882 -49906406 - THE1B LTR MaLR -1 363 1 264 59 0 0 chr10 95683170 95683204 -49906084 + (TG)n Simple_repeat Simple_repeat 1 34 0 774 291 122 17 chr10 95683402 95683863 -49905425 + MLT1J LTR MaLR 3 511 0 190 244 231 26 chr10 95684632 95684710 -49904578 - MIR SINE MIR -94 114 21 9413 202 44 35 chr10 95684726 95686006 -49903282 - L1MA5 LINE L1 -4 7358 6091 2502 73 0 6 chr10 95686006 95686319 -49902969 - AluY SINE Alu 0 311 1 9413 202 44 35 chr10 95686319 95686967 -49902321 - L1MA5 LINE L1 -1271 6091 5450 797 125 0 0 chr10 95686967 95687087 -49902201 - L1PB1 LINE L1 -5 6146 6027 9413 202 44 35 chr10 95687087 95689334 -49899954 - L1MA5 LINE L1 -1912 5450 3225 2280 110 0 3 chr10 95689334 95689634 -49899654 - AluSc SINE Alu -10 299 1 9413 202 44 35 chr10 95689634 95691900 -49897388 - L1MA5 LINE L1 -4137 3225 1 304 275 33 33 chr10 95692085 95692176 -49897112 - L2 LINE L2 0 3313 3223 291 185 0 0 chr10 95692176 95692230 -49897058 + Alu SINE Alu 247 300 -2 603 322 109 16 chr10 95692232 95692536 -49896752 - L2 LINE L2 -84 3229 2898 618 246 54 88 chr10 95692662 95692902 -49896386 - MIR SINE MIR -26 236 5 1334 256 167 6 chr10 95694151 95694679 -49894609 + MLT1E2 LTR MaLR 14 626 0 352 279 9 0 chr10 95694679 95694790 -49894498 - L1ME LINE L1 -362 5759 5648 195 42 0 0 chr10 95695836 95695860 -49893428 + (TG)n Simple_repeat Simple_repeat 1 24 0 497 260 20 33 chr10 95696040 95696190 -49893098 + MIR SINE MIR 7 154 -108 217 324 0 0 chr10 95696684 95696752 -49892536 + L2 LINE L2 2719 2786 -528 514 323 126 19 chr10 95696937 95697302 -49891986 + MLT1K LTR MaLR 151 554 -34 881 0 57 34 chr10 95700305 95700480 -49888808 + (TA)n Simple_repeat Simple_repeat 2 180 0 330 233 12 12 chr10 95700917 95701003 -49888285 + MLT1I LTR MaLR 324 409 0 2138 133 3 0 chr10 95701316 95701616 -49887672 - AluSx SINE Alu -11 301 1 256 265 0 24 chr10 95702395 95702478 -49886810 + (TATG)n Simple_repeat Simple_repeat 3 83 0 183 184 0 0 chr10 95702779 95702817 -49886471 + GA-rich Low_complexity Low_complexity 4 41 0 392 268 21 10 chr10 95702852 95702949 -49886339 + L2 LINE L2 3173 3270 -2 504 168 10 0 chr10 95704664 95704765 -49884523 - L1MA7 LINE L1 -5 6286 6185 215 197 145 53 chr10 95705039 95705115 -49884173 + MIR SINE MIR 64 146 -62 495 250 56 6 chr10 95705491 95705621 -49883667 + MIR SINE MIR 115 251 -11 195 238 95 16 chr10 95707011 95707074 -49882214 + L2 LINE L2 3186 3253 -60 1047 194 26 62 chr10 95707416 95707643 -49881645 - MER20 DNA MER1_type 0 219 1 355 277 201 13 chr10 95707888 95708047 -49881241 + MER5A DNA MER1_type 1 189 0 201 318 0 16 chr10 95708701 95708764 -49880524 + L2 LINE L2 3206 3267 -5 544 258 147 10 chr10 95709668 95709866 -49879422 + MLT1H LTR MaLR 3 227 -322 423 207 30 111 chr10 95709958 95710093 -49879195 + MLT1H LTR MaLR 424 547 -2 353 264 46 11 chr10 95710375 95710462 -49878826 + MIR SINE MIR 64 153 -55 1570 184 47 39 chr10 95710875 95711234 -49878054 + MLT1B LTR MaLR 5 366 -24 394 288 65 35 chr10 95711255 95711425 -49877863 - MIR SINE MIR -86 176 2 2294 121 150 3 chr10 95711760 95712133 -49877155 + MSTA LTR MaLR 1 428 0 963 134 140 6 chr10 95712601 95712772 -49876516 - MER20 DNA MER1_type -5 214 21 1712 194 0 0 chr10 95713116 95713395 -49875893 + AluJb SINE Alu 9 287 -25 212 315 92 46 chr10 95713548 95713678 -49875610 - MIR SINE MIR 0 262 127 1155 289 107 35 chr10 95714503 95715015 -49874273 + MLT1H1 LTR MaLR 1 549 -6 4358 27 8 0 chr10 95715233 95715717 -49873571 + L1PA4 LINE L1 5666 6153 -2 255 226 54 21 chr10 95716446 95716539 -49872749 + MER4-int LTR ERV1 1070 1165 -5433 249 196 0 0 chr10 95716539 95716590 -49872698 + (TA)n Simple_repeat Simple_repeat 1 51 0 256 255 0 43 chr10 95716590 95716684 -49872604 - L1MC4 LINE L1 -1339 6703 6614 526 306 47 6 chr10 95716722 95716892 -49872396 + MER5A DNA MER1_type 7 183 -6 37 0 0 0 chr10 95716953 95716990 -49872298 + AT_rich Low_complexity Low_complexity 1 37 0 265 281 85 0 chr10 95717116 95717198 -49872090 - MIR SINE MIR 0 262 174 511 257 251 16 chr10 95717757 95717944 -49871344 - MIR SINE MIR 0 262 32 348 338 119 5 chr10 95718003 95718204 -49871084 - L2 LINE L2 -1 3312 3089 269 307 104 26 chr10 95718240 95718404 -49870884 - MIR SINE MIR -68 140 16 338 331 31 8 chr10 95720155 95720282 -49869006 + Charlie8 DNA MER1_type 2 131 -2286 1305 218 20 12 chr10 95720282 95720769 -49868519 + L1ME LINE L1 5044 5536 -630 22 35 0 0 chr10 95721562 95721591 -49867697 + AT_rich Low_complexity Low_complexity 1 29 0 251 295 114 0 chr10 95721674 95721813 -49867475 + L1 LINE L1 4747 4896 -1250 2051 186 55 31 chr10 95722388 95722844 -49866444 + MLT1C LTR MaLR 1 467 0 419 287 82 31 chr10 95722982 95723177 -49866111 - MIR SINE MIR -24 238 34 443 284 35 18 chr10 95723190 95723359 -49865929 + MARNA DNA Mariner 407 578 -8 697 325 75 35 chr10 95724482 95725180 -49864108 - L2 LINE L2 0 3272 2537 224 290 16 0 chr10 95725709 95725771 -49863517 - L2 LINE L2 -1 3271 3209 825 282 75 39 chr10 95727082 95727468 -49861820 - MLT1K LTR MaLR 0 588 189 654 59 0 0 chr10 95727633 95727718 -49861570 + Alu SINE Alu 220 304 -5 215 299 0 26 chr10 95727766 95727883 -49861405 + T-rich Low_complexity Low_complexity 3 116 0 197 97 16 65 chr10 95728330 95728392 -49860896 + (TTA)n Simple_repeat Simple_repeat 1 59 0 366 278 143 58 chr10 95728403 95728626 -49860662 - MIR SINE MIR 0 262 21 2192 124 7 0 chr10 95728886 95729192 -49860096 - AluSq SINE Alu -5 308 1 1398 307 32 17 chr10 95729458 95729927 -49859361 - MLT1K LTR MaLR -44 544 69 2338 106 3 0 chr10 95730952 95731264 -49858024 + AluSq SINE Alu 1 313 0 191 205 0 0 chr10 95732336 95732375 -49856913 + L2 LINE L2 3272 3310 -3 196 245 0 20 chr10 95732586 95732635 -49856653 + L2 LINE L2 2719 2766 -548 198 265 0 0 chr10 95733777 95733826 -49855462 - L2 LINE L2 0 3313 3265 256 305 24 24 chr10 95733830 95733912 -49855376 - MIR SINE MIR -111 97 16 574 314 29 33 chr10 95733957 95734199 -49855089 - MIR SINE MIR -12 250 10 331 330 10 0 chr10 95734832 95734935 -49854353 + MIR3 SINE MIR 64 167 -41 574 274 11 45 chr10 95734947 95735126 -49854162 - MER117 DNA MER1_type -19 178 6 394 286 67 39 chr10 95735609 95735787 -49853501 + MIR SINE MIR 49 231 -31 431 243 34 67 chr10 95736153 95736366 -49852922 - MIR SINE MIR -38 224 19 1174 201 48 1 chr10 95737292 95737592 -49851696 - MLT1A1 LTR MaLR -4 361 1 445 266 52 23 chr10 95737994 95738167 -49851121 - MIR SINE MIR 0 262 85 1788 188 3 0 chr10 95738626 95738935 -49850353 + AluJo SINE Alu 1 310 -2 243 0 0 0 chr10 95739932 95739959 -49849329 + (T)n Simple_repeat Simple_repeat 1 27 0 977 236 18 14 chr10 95740155 95740375 -49848913 + MER58A DNA MER1_type 4 224 0 273 202 60 24 chr10 95741677 95741761 -49847527 - MLT1I LTR MaLR -322 87 1 253 251 88 96 chr10 95741802 95742165 -49847123 + L2 LINE L2 1823 2182 -1132 180 77 0 0 chr10 95742197 95742223 -49847065 + (CAAT)n Simple_repeat Simple_repeat 4 29 0 235 237 93 0 chr10 95742374 95742471 -49846817 - MLT1L LTR MaLR 0 615 510 2358 201 9 2 chr10 95742691 95743143 -49846145 - L1MB7 LINE L1 -9 6175 5721 350 234 71 78 chr10 95743265 95743406 -49845882 - MLT1L LTR MaLR -457 158 19 214 182 0 0 chr10 95743420 95743464 -49845824 + (CAAA)n Simple_repeat Simple_repeat 2 45 0 521 276 39 60 chr10 95743928 95744160 -49845128 - MIR SINE MIR 0 262 36 2344 149 8 25 chr10 95744292 95744687 -49844601 + MLT1B LTR MaLR 3 390 0 255 140 120 0 chr10 95744687 95744737 -49844551 + MIR3 SINE MIR 110 165 -43 264 30 0 0 chr10 95745135 95745168 -49844120 + (TG)n Simple_repeat Simple_repeat 2 34 0 232 219 0 0 chr10 95745596 95745637 -49843651 + polypyrimidine Low_complexity Low_complexity 2 42 0 830 158 16 0 chr10 95745643 95745770 -49843518 - FLAM_A SINE Alu -4 129 1 629 303 73 4 chr10 95746079 95746313 -49842975 - MIR SINE MIR 0 262 13 1104 176 0 0 chr10 95746696 95746883 -49842405 - MER53 DNA DNA 0 189 3 184 360 56 0 chr10 95748029 95748118 -49841170 - L2 LINE L2 -215 3057 2964 2594 44 0 22 chr10 95748172 95748488 -49840800 + AluY SINE Alu 1 309 -2 817 167 0 0 chr10 95749017 95749149 -49840139 - FRAM SINE Alu -5 171 40 340 153 294 0 chr10 95749877 95749962 -49839326 - L2 LINE L2 0 3313 3204 396 184 18 18 chr10 95750413 95750522 -49838766 + CT-rich Low_complexity Low_complexity 2 110 0 27 0 0 0 chr10 95750729 95750756 -49838532 + AT_rich Low_complexity Low_complexity 1 27 0 24 0 0 0 chr10 95753596 95753620 -49835668 + AT_rich Low_complexity Low_complexity 1 24 0 302 323 29 76 chr10 95753684 95754000 -49835288 + L2 LINE L2 2374 2674 -640 805 308 146 29 chr10 95754107 95754792 -49834496 - L1 LINE L1 -2196 3950 3184 2227 86 14 0 chr10 95755858 95756172 -49833116 + AluSp SINE Alu 1 318 0 394 309 134 25 chr10 95756179 95756380 -49832908 + MIR SINE MIR 35 257 -5 210 71 0 0 chr10 95757884 95757912 -49831376 + (TTTC)n Simple_repeat Simple_repeat 2 29 0 214 27 0 54 chr10 95758817 95758854 -49830434 + (TTTTC)n Simple_repeat Simple_repeat 1 35 0 200 279 146 24 chr10 95760241 95760406 -49828882 - L2 LINE L2 -371 2943 2759 * 250 352 112 26 chr10 95760398 95760631 -49828657 - L2 LINE L2 -123 3149 2897 * 730 206 121 45 chr10 95760621 95760822 -49828466 + MIR SINE MIR 17 238 -24 1899 206 51 28 chr10 95760822 95761316 -49827972 + MLT1D LTR MaLR 1 505 0 730 206 121 45 chr10 95761316 95761337 -49827951 + MIR SINE MIR 238 256 -6 357 229 57 29 chr10 95761534 95761639 -49827649 - LTR67 LTR ERVL -22 535 428 215 200 20 20 chr10 95761998 95762048 -49827240 + MIR SINE MIR 104 153 -109 193 299 103 23 chr10 95762097 95762184 -49827104 + L2 LINE L2 2922 3015 -257 581 286 131 26 chr10 95762208 95762596 -49826692 + LTR33A LTR ERVL 11 439 -84 1950 244 81 13 chr10 95762598 95763140 -49826148 - MLT1G LTR MaLR -2 588 10 323 339 84 56 chr10 95763231 95763482 -49825806 + L2 LINE L2 3015 3272 0 593 235 75 78 chr10 95763598 95763904 -49825384 - MER102b DNA MER1_type 0 341 37 202 167 83 50 chr10 95764466 95764526 -49824762 + L2 LINE L2 3208 3269 -3 235 205 144 0 chr10 95764562 95764624 -49824664 + MIR SINE MIR 84 154 -54 444 294 80 43 chr10 95765722 95765998 -49823290 + L2 LINE L2 2968 3253 -19 281 148 49 0 chr10 95767782 95767843 -49821445 + MLT1K LTR MaLR 522 585 -3 307 330 9 28 chr10 95767937 95768043 -49821245 - MIR SINE MIR -146 116 13 190 278 130 46 chr10 95768489 95768597 -49820691 - L2 LINE L2 0 3313 3197 181 200 0 0 chr10 95771252 95771292 -49817996 + MIR SINE MIR 96 135 -73 509 296 21 37 chr10 95771564 95771750 -49817538 + MIR SINE MIR 30 213 -49 203 354 61 10 chr10 95771824 95771923 -49817365 - MIR SINE MIR -60 148 45 2214 103 7 0 chr10 95772934 95773234 -49816054 - AluSc SINE Alu -7 302 1 476 326 47 42 chr10 95773531 95773767 -49815521 - MIR SINE MIR -14 248 12 195 224 86 0 chr10 95774421 95774479 -49814809 + MIR SINE MIR 44 106 -156 506 204 53 0 chr10 95774523 95774636 -49814652 - MLT1I LTR MaLR -6 403 285 457 172 0 35 chr10 95774736 95774823 -49814465 - MLT1I LTR MaLR -253 156 73 304 300 71 14 chr10 95775135 95775275 -49814013 - L2 LINE L2 -220 3052 2905 194 348 146 0 chr10 95775519 95775608 -49813680 + MIR3 SINE MIR 77 178 -30 316 214 45 56 chr10 95776166 95776255 -49813033 + MIR SINE MIR 83 170 -92 255 61 0 0 chr10 95776310 95776343 -49812945 + (TAA)n Simple_repeat Simple_repeat 1 33 0 508 197 27 106 chr10 95776638 95776826 -49812462 + MER69A DNA AcHobo 1 173 -4 561 289 0 7 chr10 95776859 95776994 -49812294 + MIR SINE MIR 17 150 -112 198 0 0 0 chr10 95777001 95777023 -49812265 + (TTC)n Simple_repeat Simple_repeat 2 23 0 6158 147 6 21 chr10 95777026 95778989 -49810299 - L1PB1 LINE L1 -7 6144 4214 350 21 21 0 chr10 95779887 95779934 -49809354 + (CA)n Simple_repeat Simple_repeat 2 49 0 553 310 70 19 chr10 95780091 95780349 -49808939 + LTR16B LTR ERVL 194 464 0 1747 187 7 0 chr10 95780478 95780778 -49808510 + AluJo SINE Alu 1 302 -10 358 321 22 27 chr10 95781367 95781551 -49807737 - MER20 DNA MER1_type -1 218 36 531 237 153 89 chr10 95781741 95782167 -49807121 - MLT1K LTR MaLR -51 537 85 1099 154 0 0 chr10 95783022 95783197 -49806091 - AluSg/x SINE Alu -2 310 136 192 260 41 55 chr10 95783766 95783839 -49805449 + L2 LINE L2 3187 3258 -14 404 243 109 59 chr10 95785404 95785606 -49803682 + MER112 DNA MER1_type 40 251 -9 298 330 57 9 chr10 95785614 95785720 -49803568 - MER5A DNA MER1_type -16 173 63 311 333 44 18 chr10 95785739 95785853 -49803435 + L2 LINE L2 3156 3272 0 188 244 24 0 chr10 95785992 95786032 -49803256 - L3 LINE CR1 -12 1565 1525 194 340 43 43 chr10 95786032 95786220 -49803068 + MER5A DNA MER1_type 2 189 0 467 275 96 11 chr10 95786258 95786436 -49802852 - L3 LINE CR1 -99 1478 1286 603 295 62 33 chr10 95786458 95786940 -49802348 - L1ME4a LINE L1 -48 6073 5578 4024 155 16 7 chr10 95787358 95788093 -49801195 - L1MB3 LINE L1 -1 6182 5441 26 50 0 0 chr10 95788509 95788549 -49800739 + AT_rich Low_complexity Low_complexity 1 40 0 449 326 15 8 chr10 95788585 95788843 -49800445 + L1ME3A LINE L1 5633 5894 -276 1692 196 10 7 chr10 95788958 95789264 -49800024 + AluJo SINE Alu 1 307 -5 500 325 115 46 chr10 95789594 95790175 -49799113 - L1ME4a LINE L1 -1111 5035 4496 3985 52 2 6 chr10 95790175 95790676 -49798612 + L1PA6 LINE L1 5656 6154 0 500 325 115 46 chr10 95790676 95791134 -49798154 - L1ME4a LINE L1 -1650 4496 3915 249 137 0 78 chr10 95792118 95792169 -49797119 - L2 LINE L2 0 3272 3226 615 271 33 33 chr10 95792523 95792737 -49796551 - MIR SINE MIR 0 262 49 635 278 103 5 chr10 95793337 95793560 -49795728 - MIR SINE MIR -13 249 5 1024 191 11 0 chr10 95793734 95793922 -49795366 - MER58A DNA MER1_type 0 224 35 269 345 0 8 chr10 95795064 95795183 -49794105 + GA-rich Low_complexity Low_complexity 3 120 0 262 238 0 83 chr10 95795576 95795660 -49793628 + MIR SINE MIR 112 188 -74 378 0 0 0 chr10 95795669 95795711 -49793577 + (CA)n Simple_repeat Simple_repeat 2 43 0 2491 125 15 5 chr10 95796755 95797155 -49792133 + L1PA13 LINE L1 5755 6158 -5 1833 173 37 6 chr10 95798977 95799330 -49789958 + MLT1A1 LTR MaLR 2 365 0 236 295 85 31 chr10 95799369 95799498 -49789790 - L2 LINE L2 -1 3271 3136 228 269 43 54 chr10 95799760 95799853 -49789435 + MER91B DNA MER1_type 33 124 -66 1743 156 44 30 chr10 95799980 95800275 -49789013 - AluJo SINE Alu -13 299 1 2017 141 29 35 chr10 95800745 95801120 -49788168 - THE1C LTR MaLR 0 375 3 711 284 47 19 chr10 95801314 95801529 -49787759 - MIR SINE MIR -10 252 32 207 222 56 0 chr10 95801661 95801715 -49787573 + (TATATG)n Simple_repeat Simple_repeat 3 59 0 548 328 58 72 chr10 95802464 95802897 -49786391 + L2 LINE L2 2835 3261 -11 350 210 0 12 chr10 95803108 95803189 -49786099 - MER116 DNA Mariner 0 80 1 1479 222 142 43 chr10 95803676 95804262 -49785026 - HsTC2a DNA Tc2 0 744 101 519 253 14 0 chr10 95804683 95804829 -49784459 - MER117 DNA MER1_type -49 148 1 2211 105 6 29 chr10 95805948 95806263 -49783025 + AluSc SINE Alu 1 308 -1 254 348 65 0 chr10 95807877 95807969 -49781319 + L2 LINE L2 3175 3272 0 2962 236 45 34 chr10 95809872 95810659 -49778629 - L1ME1 LINE L1 -22 6144 5350 3908 174 32 19 chr10 95810702 95812212 -49777076 - L1MB5 LINE L1 -192 5982 4439 1432 186 12 63 chr10 95812224 95812527 -49776761 - L1ME1 LINE L1 -777 5369 5093 2102 117 0 13 chr10 95812527 95812825 -49776463 + AluSx SINE Alu 2 295 -17 1432 186 12 63 chr10 95812825 95812946 -49776342 - L1ME1 LINE L1 -1053 5093 4967 202 227 80 68 chr10 95813037 95813125 -49776163 + MIR SINE MIR 124 212 -50 486 345 65 0 chr10 95813240 95813440 -49775848 + MIR SINE MIR 2 214 -48 357 355 96 70 chr10 95813580 95813966 -49775322 + L2 LINE L2 2872 3267 -5 396 286 43 25 chr10 95815194 95815355 -49773933 - MIR SINE MIR -10 252 89 497 300 126 58 chr10 95815535 95816018 -49773270 + MARNA DNA Mariner 63 578 -8 3646 233 93 45 chr10 95816065 95816780 -49772508 + L1PA13 LINE L1 1 785 -6002 216 0 0 0 chr10 95816780 95816804 -49772484 + (CTTTG)n Simple_repeat Simple_repeat 5 28 0 3646 233 93 45 chr10 95816804 95817147 -49772141 + L1PA13 LINE L1 785 1110 -5677 20366 165 27 13 chr10 95817159 95822485 -49766803 + L1PA13 LINE L1 1397 6814 0 1667 153 21 17 chr10 95823119 95823406 -49765882 + AluJb SINE Alu 1 288 -24 1695 161 3 39 chr10 95823709 95824019 -49765269 + AluJo SINE Alu 14 312 0 250 264 0 56 chr10 95824882 95824954 -49764334 + L2 LINE L2 3205 3272 0 2023 171 91 44 chr10 95825234 95825709 -49763579 + MLT1D LTR MaLR 1 497 -8 236 324 63 18 chr10 95825754 95825865 -49763423 + MIR SINE MIR 61 176 -86 560 135 0 58 chr10 95825945 95826049 -49763239 - L1MC1 LINE L1 0 6333 6236 201 311 111 15 chr10 95828112 95828247 -49761041 + L2 LINE L2 3153 3300 -13 185 298 143 12 chr10 95828881 95828965 -49760323 + MIR SINE MIR 69 163 -99 385 319 8 0 chr10 95828978 95829097 -49760191 + MIR SINE MIR 139 258 -4 441 308 57 43 chr10 95830370 95830581 -49758707 + MIR SINE MIR 29 242 -20 458 184 44 35 chr10 95830740 95830854 -49758434 - L1MB3 LINE L1 0 6183 6069 351 410 52 40 chr10 95830861 95831381 -49757907 + L1PBb LINE L1 6 531 -6318 262 364 8 45 chr10 95831550 95831797 -49757491 + L1PBb LINE L1 767 1004 -5845 322 281 91 28 chr10 95831927 95832230 -49757058 + L1PBb LINE L1 1003 1563 -5285 12128 220 31 16 chr10 95832241 95835559 -49753729 + L1PA16 LINE L1 725 4223 -2000 1625 148 107 23 chr10 95835559 95835904 -49753384 + THE1C LTR MaLR 2 375 0 12128 220 31 16 chr10 95835904 95837911 -49751377 + L1PA16 LINE L1 4223 6199 -24 3738 134 22 16 chr10 95837923 95838558 -49750730 - L1MB3 LINE L1 -100 6083 5445 2224 140 5 31 chr10 95838945 95839330 -49749958 + THE1C LTR MaLR 1 375 0 3314 99 11 78 chr10 95839330 95839897 -49749391 + THE1C-int LTR MaLR 1 529 -1051 * 3996 108 2 16 chr10 95839887 95840454 -49748834 + THE1C-int LTR MaLR 1022 1580 0 2157 148 8 26 chr10 95840454 95840832 -49748456 + THE1C LTR MaLR 1 371 -4 276 30 0 0 chr10 95840937 95840970 -49748318 + (TATG)n Simple_repeat Simple_repeat 2 34 0 1002 85 8 0 chr10 95840972 95841101 -49748187 - AluSq/x SINE Alu -182 130 1 2041 142 3 7 chr10 95841103 95841406 -49747882 - AluSx SINE Alu -10 302 1 234 277 96 0 chr10 95841493 95841576 -49747712 - L1MEd LINE L1 -3576 2553 2463 862 287 27 55 chr10 95842030 95842269 -49747019 - L1MEd LINE L1 -4642 1668 1424 1578 161 104 0 chr10 95842269 95842548 -49746740 - AluJo SINE Alu -4 308 1 862 287 27 55 chr10 95842548 95843265 -49746023 - L1MEd LINE L1 -4886 1424 707 201 39 0 0 chr10 95843267 95843293 -49745995 + (TA)n Simple_repeat Simple_repeat 2 27 0 331 173 10 115 chr10 95843293 95843397 -49745891 - L1MC4 LINE L1 -1337 6705 6613 315 277 77 23 chr10 95843400 95843530 -49745758 - L1MEd LINE L1 -5422 697 561 383 375 70 0 chr10 95843625 95843825 -49745463 + L1M4 LINE L1 3978 4191 -1955 329 297 164 17 chr10 95843957 95844250 -49745038 + L1M4 LINE L1 4622 4957 -1189 763 281 181 17 chr10 95846577 95846878 -49742410 - L1MC4a LINE L1 -1762 6046 5796 1840 209 3 11 chr10 95846878 95847246 -49742042 + MLT1A1 LTR MaLR 1 365 0 763 281 181 17 chr10 95847246 95847518 -49741770 - L1MC4a LINE L1 -2012 5796 5379 290 253 131 30 chr10 95847574 95847673 -49741615 + MIR SINE MIR 148 256 -6 1866 173 0 6 chr10 95848403 95848716 -49740572 - AluJo SINE Alu -1 311 1 706 269 170 61 chr10 95850515 95851010 -49738278 + MLT1K LTR MaLR 23 571 -17 216 191 0 24 chr10 95851082 95851124 -49738164 + CT-rich Low_complexity Low_complexity 1 41 0 277 283 54 11 chr10 95851213 95851305 -49737983 + MIR3 SINE MIR 107 202 -6 2330 65 10 3 chr10 95851950 95852257 -49737031 - AluY SINE Alu -2 309 1 637 231 22 0 chr10 95852698 95852832 -49736456 + MIR SINE MIR 100 236 -26 214 278 120 83 chr10 95853942 95853977 -49735311 + L2 LINE L2 3175 3207 -106 2408 81 3 0 chr10 95853977 95854275 -49735013 + AluSg SINE Alu 1 299 -11 2194 84 4 0 chr10 95854275 95854550 -49734738 + AluSp SINE Alu 32 307 -6 214 278 120 83 chr10 95854550 95854646 -49734642 + L2 LINE L2 3206 3312 -1 311 67 22 0 chr10 95855208 95855253 -49734035 + MADE1 DNA Mariner 1 46 -34 773 295 161 34 chr10 95855666 95855827 -49733461 - L2 LINE L2 -4 3309 3170 29 47 0 0 chr10 95855827 95855870 -49733418 + AT_rich Low_complexity Low_complexity 1 43 0 773 295 161 34 chr10 95855870 95856042 -49733246 - L2 LINE L2 -143 3170 3021 1065 157 98 0 chr10 95856042 95856246 -49733042 + MER58A DNA MER1_type 1 224 0 773 295 161 34 chr10 95856246 95856696 -49732592 - L2 LINE L2 -292 3021 2332 464 322 70 19 chr10 95858826 95858985 -49730303 - MIR SINE MIR -12 250 76 461 163 0 0 chr10 95858985 95859065 -49730223 + MER116 DNA Mariner 1 80 0 464 322 70 19 chr10 95859065 95859119 -49730169 - MIR SINE MIR -186 76 26 190 260 110 0 chr10 95860109 95860182 -49729106 + L3b LINE CR1 1347 1427 -156 329 253 211 0 chr10 95862211 95862306 -49726982 + L2 LINE L2 3186 3300 -13 552 186 23 54 chr10 95862668 95862797 -49726491 - AluSq/x SINE Alu -186 127 3 27 29 0 0 chr10 95862864 95862898 -49726390 + AT_rich Low_complexity Low_complexity 1 34 0 280 164 30 0 chr10 95862900 95862967 -49726321 + (TA)n Simple_repeat Simple_repeat 2 70 0 223 172 17 52 chr10 95863285 95863343 -49725945 + CT-rich Low_complexity Low_complexity 2 57 0 40761 61 8 5 chr10 95863436 95869564 -49719724 - L1PA5 LINE L1 -8 6146 2 486 256 126 47 chr10 95870338 95870529 -49718759 - MIR SINE MIR -25 237 32 273 367 29 0 chr10 95870611 95870750 -49718538 - MER117 DNA MER1_type -51 146 4 1182 284 40 21 chr10 95870799 95871222 -49718066 + MLT1J1 LTR MaLR 3 433 -13 386 260 87 0 chr10 95871624 95871774 -49717514 + MER103 DNA DNA 3 165 -1 1966 129 10 10 chr10 95872228 95872530 -49716758 + AluSq SINE Alu 1 302 -11 23 33 0 0 chr10 95872879 95872909 -49716379 + AT_rich Low_complexity Low_complexity 1 30 0 667 331 30 8 chr10 95873353 95873616 -49715672 + MLT1L LTR MaLR 8 276 -339 1761 119 0 12 chr10 95873643 95873894 -49715394 - AluSg SINE Alu -24 286 39 344 328 31 31 chr10 95874023 95874129 -49715159 + MLT1L LTR MaLR 422 530 -85 1589 186 34 52 chr10 95874129 95874510 -49714778 - MLT1A2 LTR MaLR 0 374 1 344 328 31 31 chr10 95874510 95874595 -49714693 + MLT1L LTR MaLR 529 613 -2 287 305 70 23 chr10 95876241 95876369 -49712919 - MIR SINE MIR -12 250 117 1377 84 15 5 chr10 95876398 95876600 -49712688 + L1PA11 LINE L1 5950 6153 -21 198 103 0 0 chr10 95876626 95876655 -49712633 + (CA)n Simple_repeat Simple_repeat 2 30 0 685 276 85 1 chr10 95876919 95877137 -49712151 + MIR SINE MIR 16 249 -13 267 298 193 9 chr10 95877608 95877722 -49711566 - MIR SINE MIR -70 192 58 306 0 0 0 chr10 95878715 95878749 -49710539 + (CA)n Simple_repeat Simple_repeat 2 35 0 21 0 0 0 chr10 95878802 95878823 -49710465 + AT_rich Low_complexity Low_complexity 1 21 0 247 250 17 0 chr10 95878952 95879012 -49710276 + GA-rich Low_complexity Low_complexity 1 61 0 195 100 0 0 chr10 95879163 95879193 -49710095 + (TCCA)n Simple_repeat Simple_repeat 4 33 0 712 209 77 43 chr10 95879193 95879428 -49709860 - L2 LINE L2 -38 3275 3033 444 310 76 10 chr10 95879425 95879622 -49709666 - L2 LINE L2 -537 2777 2568 * 216 111 0 0 chr10 95879639 95879675 -49709613 + (TG)n Simple_repeat Simple_repeat 2 37 0 1511 152 49 150 chr10 95879683 95880235 -49709053 + LTR54B LTR ERV1 3 498 0 22 0 0 0 chr10 95880257 95880279 -49709009 + AT_rich Low_complexity Low_complexity 1 22 0 2714 217 121 21 chr10 95880280 95881363 -49707925 - L1ME3A LINE L1 -4 6166 4984 305 254 109 9 chr10 95881511 95881621 -49707667 + L2 LINE L2 3189 3309 -4 552 277 209 13 chr10 95881824 95882266 -49707022 - L1MC/D LINE L1 -303 5818 5304 21 36 0 0 chr10 95882310 95882338 -49706950 + AT_rich Low_complexity Low_complexity 1 28 0 1308 238 75 42 chr10 95882445 95882879 -49706409 + LTR33 LTR ERVL 1 456 -65 2011 124 7 24 chr10 95882879 95883177 -49706111 - AluSx SINE Alu -19 293 1 1308 238 75 42 chr10 95883177 95883246 -49706042 + LTR33 LTR ERVL 456 521 0 758 266 60 10 chr10 95884234 95884433 -49704855 + MIR SINE MIR 31 239 -23 180 0 0 0 chr10 95884636 95884656 -49704632 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 188 323 16 0 chr10 95885819 95885881 -49703407 - L2 LINE L2 0 3313 3251 22 0 0 0 chr10 95886691 95886713 -49702575 + AT_rich Low_complexity Low_complexity 1 22 0 232 290 130 25 chr10 95887136 95887298 -49701990 + MIR SINE MIR 84 262 0 713 220 98 56 chr10 95888901 95889491 -49699797 - LTR48 LTR ERV1 0 787 9 246 62 0 0 chr10 95890420 95890452 -49698836 + (CA)n Simple_repeat Simple_repeat 1 32 0 6607 128 62 15 chr10 95890565 95891447 -49697841 - Tigger3b DNA MER2_type -1813 1215 263 3437 122 42 57 chr10 95891447 95892110 -49697178 + MER39B LTR ERV1 1 653 0 6607 128 62 15 chr10 95892110 95892385 -49696903 - Tigger3b DNA MER2_type -2765 263 3 817 244 87 51 chr10 95892686 95892755 -49696533 - L1MC/D LINE L1 -724 5450 5385 1387 238 128 42 chr10 95892755 95893301 -49695987 + MLT1G1 LTR MaLR 3 595 0 817 244 87 51 chr10 95893301 95893548 -49695740 - L1MC/D LINE L1 -789 5385 5148 2376 63 0 38 chr10 95893548 95893867 -49695421 - AluY SINE Alu -4 307 1 817 244 87 51 chr10 95893867 95894654 -49694634 - L1MC/D LINE L1 -1026 5148 4310 26 64 0 0 chr10 95894665 95894712 -49694576 + AT_rich Low_complexity Low_complexity 1 47 0 11112 188 23 20 chr10 95894968 95897380 -49691908 + Cheshire DNA MER1_type 1 2420 0 475 161 31 151 chr10 95897463 95897655 -49691633 - MIR SINE MIR -14 248 80 443 324 67 6 chr10 95897658 95897837 -49691451 + MIR SINE MIR 29 218 -44 592 296 42 25 chr10 95898085 95898325 -49690963 + MIR SINE MIR 13 256 -6 542 187 6 115 chr10 95898475 95898657 -49690631 - MER53 DNA DNA -26 163 2 198 0 0 0 chr10 95900701 95900723 -49688565 + (A)n Simple_repeat Simple_repeat 1 22 0 220 187 0 0 chr10 95900854 95900901 -49688387 - MIR SINE MIR -88 120 73 594 293 187 46 chr10 95901214 95902094 -49687194 + L2 LINE L2 2302 3313 0 1802 230 123 49 chr10 95903858 95904475 -49684813 + MER20B DNA MER1_type 1 678 -105 2254 92 0 3 chr10 95904475 95904768 -49684520 + AluSc SINE Alu 1 292 -17 1802 230 123 49 chr10 95904768 95904859 -49684429 + MER20B DNA MER1_type 678 761 -22 4433 208 30 46 chr10 95904865 95906014 -49683274 + L1MB7 LINE L1 13 1142 -5400 * 13610 27 1 3 chr10 95906013 95908402 -49680886 + L1PA4 LINE L1 3768 6152 -3 3592 227 49 29 chr10 95908425 95910859 -49678429 + L1MB7 LINE L1 1109 3679 -2965 1721 192 13 11 chr10 95910863 95911244 -49678044 + L1MB7 LINE L1 5069 5450 -1194 2724 212 15 6 chr10 95911263 95911800 -49677488 - MER74A LTR ERVL -16 542 1 4470 168 61 14 chr10 95911810 95912957 -49676331 + L1MB7 LINE L1 5460 6663 -19 1539 220 89 30 chr10 95913002 95913430 -49675858 - MLT1D LTR MaLR -40 465 13 25 75 0 0 chr10 95914125 95914178 -49675110 + AT_rich Low_complexity Low_complexity 1 53 0 365 245 10 20 chr10 95915734 95915832 -49673456 + HAL1b LINE L1 362 458 -890 1457 208 130 93 chr10 95916029 95916853 -49672435 + L1MC5 LINE L1 7090 7943 -18 1501 199 3 32 chr10 95916947 95917263 -49672025 + AluJo SINE Alu 1 307 -5 441 336 15 8 chr10 95917440 95917574 -49671714 + MIR SINE MIR 17 151 -57 341 307 196 30 chr10 95918050 95918346 -49670942 + L3b LINE CR1 1180 1524 -59 5773 147 48 12 chr10 95918527 95919749 -49669539 - L1PBa LINE L1 -3632 3230 1956 4405 106 9 0 chr10 95919762 95920397 -49668891 + L1PB1 LINE L1 5507 6147 -4 33 0 0 0 chr10 95920650 95920683 -49668605 + AT_rich Low_complexity Low_complexity 1 33 0 775 242 142 11 chr10 95921519 95921829 -49667459 + MLT1A1 LTR MaLR 1 369 -5 1113 212 18 5 chr10 95923092 95923309 -49665979 - MER58A DNA MER1_type -4 220 1 22 80 0 0 chr10 95923397 95923447 -49665841 + AT_rich Low_complexity Low_complexity 1 50 0 249 304 113 28 chr10 95923837 95923954 -49665334 + MIR SINE MIR 26 152 -56 358 371 116 19 chr10 95924789 95925429 -49663859 - L2 LINE L2 -11 3261 2550 250 228 167 80 chr10 95925468 95925630 -49663658 - MIR SINE MIR -29 233 58 338 219 31 0 chr10 95926027 95926091 -49663197 + L2 LINE L2 3247 3312 -1 216 274 137 29 chr10 95926550 95926652 -49662636 - L2 LINE L2 0 3313 3201 812 259 21 0 chr10 95928766 95928955 -49660333 + MIR SINE MIR 68 260 -2 22 56 0 0 chr10 95929397 95929433 -49659855 + AT_rich Low_complexity Low_complexity 1 36 0 200 59 29 0 chr10 95929433 95929467 -49659821 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 2231 86 4 0 chr10 95929467 95929747 -49659541 - AluSp SINE Alu -32 281 1 22 0 0 0 chr10 95931276 95931298 -49657990 + AT_rich Low_complexity Low_complexity 1 22 0 262 345 70 19 chr10 95931369 95931596 -49657692 - MIR3 SINE MIR -26 236 5 1989 118 0 17 chr10 95932917 95933277 -49656011 + AluSq SINE Alu 1 355 0 1216 265 164 9 chr10 95933542 95933976 -49655312 - MLT1D LTR MaLR -4 501 1 1410 171 52 25 chr10 95935957 95936243 -49653045 - AluJo SINE Alu -18 294 1 286 235 143 17 chr10 95937082 95937201 -49652087 + MIR SINE MIR 1 134 -128 394 287 121 40 chr10 95937223 95937446 -49651842 + L2 LINE L2 3073 3313 0 331 289 127 54 chr10 95939268 95939434 -49649854 - L2 LINE L2 -1 3271 3094 602 246 131 5 chr10 95939780 95939971 -49649317 - MIR SINE MIR 0 262 48 200 228 70 18 chr10 95940257 95940314 -49648974 - MIR SINE MIR -102 160 101 292 337 133 0 chr10 95940949 95941115 -49648173 - MIR SINE MIR -14 248 61 567 276 26 18 chr10 95942306 95942506 -49646782 + MIR SINE MIR 3 206 -56 9567 223 45 29 chr10 95942716 95945848 -49643440 - L1MEc LINE L1 -999 5216 2069 199 376 23 23 chr10 95946520 95946653 -49642635 + MIR3 SINE MIR 3 135 -73 332 295 29 36 chr10 95947706 95947845 -49641443 + MIR SINE MIR 68 205 -57 313 269 15 46 chr10 95948906 95949036 -49640252 + MIR SINE MIR 137 262 0 23 0 0 0 chr10 95949101 95949124 -49640164 + AT_rich Low_complexity Low_complexity 1 23 0 1208 308 41 33 chr10 95950745 95951039 -49638249 + MLT1L LTR MaLR 1 291 -324 2408 77 17 0 chr10 95951039 95951339 -49637949 + AluSp SINE Alu 1 305 -8 1208 308 41 33 chr10 95951339 95951651 -49637637 + MLT1L LTR MaLR 291 612 -3 246 207 69 0 chr10 95952075 95952133 -49637155 + LTR67 LTR ERVL 483 544 -13 445 303 114 11 chr10 95952810 95952985 -49636303 - MIR3 SINE MIR -6 202 10 358 333 79 67 chr10 95953028 95953268 -49636020 + L2 LINE L2 2954 3196 -76 412 327 66 48 chr10 95953604 95954013 -49635275 - MLT1L LTR MaLR 0 615 168 240 355 113 19 chr10 95955829 95956254 -49633034 + L2 LINE L2 2034 2498 -816 201 284 40 40 chr10 95956418 95956492 -49632796 + L2 LINE L2 2670 2743 -571 17136 68 4 2 chr10 95956534 95959885 -49629403 + L1PA5 LINE L1 11 3365 -2781 13451 49 11 0 chr10 95959885 95962377 -49626911 + L1PA5 LINE L1 3667 6175 0 292 360 125 47 chr10 95962437 95962781 -49626507 + L2 LINE L2 2824 3194 -78 26 64 0 0 chr10 95962981 95963028 -49626260 + AT_rich Low_complexity Low_complexity 1 47 0 394 362 53 5 chr10 95965080 95965268 -49624020 + MIR SINE MIR 7 203 -59 335 300 92 8 chr10 95965292 95965412 -49623876 + MIR SINE MIR 20 149 -113 1219 294 43 17 chr10 95966389 95966807 -49622481 + LTR16A LTR ERVL 22 450 0 522 333 139 16 chr10 95967141 95967528 -49621760 - L2 LINE L2 -1026 2288 1854 258 261 11 176 chr10 95968119 95968380 -49620908 - L2 LINE L2 -1 3271 3054 229 315 15 96 chr10 95968476 95968602 -49620686 - L3b LINE CR1 -120 1463 1357 2457 77 0 0 chr10 95968602 95968900 -49620388 - AluY SINE Alu -13 298 1 229 315 15 96 chr10 95968900 95968970 -49620318 - L3b LINE CR1 -226 1357 1283 234 0 0 0 chr10 95969021 95969047 -49620241 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 35 78 0 0 chr10 95969498 95969575 -49619713 + AT_rich Low_complexity Low_complexity 1 77 0 228 269 0 0 chr10 95969695 95969747 -49619541 - MIR SINE MIR -110 98 47 189 107 0 0 chr10 95972127 95972155 -49617133 + (GGAA)n Simple_repeat Simple_repeat 3 30 0 201 74 0 0 chr10 95972285 95972312 -49616976 + (T)n Simple_repeat Simple_repeat 1 27 0 277 325 84 7 chr10 95973189 95973343 -49615945 - MIR SINE MIR -3 259 94 575 276 147 32 chr10 95973539 95973879 -49615409 + L2 LINE L2 2935 3313 0 1206 68 25 0 chr10 95975409 95975570 -49613718 - L1MA3 LINE L1 -1 6304 6140 271 298 14 176 chr10 95975645 95975924 -49613364 - L2 LINE L2 -1 3271 3038 2393 188 40 0 chr10 95976313 95976734 -49612554 + MLT1C LTR MaLR 30 467 0 237 146 0 0 chr10 95977006 95977054 -49612234 + (TG)n Simple_repeat Simple_repeat 1 48 0 276 321 25 0 chr10 95977200 95977281 -49612007 + MIR SINE MIR 19 101 -107 543 265 221 5 chr10 95978126 95978330 -49610958 + MIR SINE MIR 5 252 -10 358 254 104 15 chr10 95978513 95978647 -49610641 - L2 LINE L2 0 3313 3168 649 191 9 0 chr10 95979507 95979617 -49609671 + FLAM_C SINE Alu 13 123 -20 22 0 0 0 chr10 95980481 95980503 -49608785 + AT_rich Low_complexity Low_complexity 1 22 0 675 215 92 0 chr10 95980815 95980978 -49608310 - MER5B DNA MER1_type 0 178 1 551 220 207 7 chr10 95980992 95981142 -49608146 + MER5A DNA MER1_type 10 189 0 481 214 65 30 chr10 95982060 95982228 -49607060 + L1ME4a LINE L1 5695 5868 -253 325 297 55 28 chr10 95982447 95982592 -49606696 + MLT1K LTR MaLR 132 280 -308 210 171 0 0 chr10 95982869 95982904 -49606384 + T-rich Low_complexity Low_complexity 1 35 0 357 24 0 0 chr10 95983008 95983050 -49606238 + (TG)n Simple_repeat Simple_repeat 1 42 0 263 136 12 37 chr10 95983094 95983175 -49606113 + (TA)n Simple_repeat Simple_repeat 2 80 0 992 59 0 7 chr10 95983351 95983486 -49605802 - L1PA15 LINE L1 -3 6162 6029 803 84 0 0 chr10 95983486 95983593 -49605695 + L1P4 LINE L1 5681 5787 -378 303 288 98 78 chr10 95983708 95983803 -49605485 - L1MC4a LINE L1 -1818 5990 5898 2444 81 0 0 chr10 95983803 95984100 -49605188 - AluSg SINE Alu -13 297 1 303 288 98 78 chr10 95984100 95984209 -49605079 - L1MC4a LINE L1 -1910 5898 5782 224 258 195 16 chr10 95984237 95984365 -49604923 + MIR SINE MIR 100 250 -12 384 301 44 13 chr10 95984427 95984636 -49604652 - L1MC4a LINE L1 -602 5757 5530 2581 225 31 40 chr10 95984754 95985358 -49603930 - MER77 LTR ERV1 -1 604 6 202 271 0 0 chr10 95985836 95985884 -49603404 - L2 LINE L2 0 3313 3266 351 315 56 22 chr10 95985889 95986067 -49603221 + MER5A DNA MER1_type 6 189 0 2056 148 30 0 chr10 95986111 95986448 -49602840 - MER7A DNA MER2_type -1 345 1 189 0 0 0 chr10 95986612 95986633 -49602655 + (CA)n Simple_repeat Simple_repeat 2 22 0 325 300 22 56 chr10 95987517 95987697 -49601591 - MER20 DNA MER1_type -17 202 29 524 298 83 9 chr10 95987810 95988038 -49601250 + MIR SINE MIR 14 258 -4 389 235 92 0 chr10 95989521 95989619 -49599669 - MER5C DNA MER1_type -203 121 15 23 0 0 0 chr10 95990104 95990127 -49599161 + AT_rich Low_complexity Low_complexity 1 23 0 218 281 24 0 chr10 95990492 95990574 -49598714 + (ATG)n Simple_repeat Simple_repeat 3 86 0 454 350 6 0 chr10 95990600 95990777 -49598511 + (ATG)n Simple_repeat Simple_repeat 3 180 0 594 340 21 13 chr10 95990837 95991075 -49598213 - MIR SINE MIR -17 245 6 494 80 60 10 chr10 95992022 95992122 -49597166 + CT-rich Low_complexity Low_complexity 1 105 0 467 188 342 0 chr10 95992134 95992251 -49597037 + MIR SINE MIR 35 191 -71 261 294 12 0 chr10 95992609 95992694 -49596594 + MIR SINE MIR 121 206 -56 207 0 0 0 chr10 95992746 95992769 -49596519 + (CAT)n Simple_repeat Simple_repeat 2 24 0 216 97 0 0 chr10 95992963 95992994 -49596294 + (T)n Simple_repeat Simple_repeat 1 31 0 2234 101 3 3 chr10 95993611 95993907 -49595381 - AluSp SINE Alu -17 296 1 354 61 0 0 chr10 95993965 95994014 -49595274 + (TG)n Simple_repeat Simple_repeat 2 50 0 2452 260 60 32 chr10 95994132 95996097 -49593191 - L1M4c LINE L1 -3621 3023 875 359 181 0 12 chr10 95996097 95996180 -49593108 + CT-rich Low_complexity Low_complexity 3 84 0 217 408 31 8 chr10 95996674 95996804 -49592484 - L3 LINE CR1 -1443 134 2 252 228 39 47 chr10 95998059 95998186 -49591102 - L1ME1 LINE L1 -1629 4517 4392 2260 214 36 2 chr10 95998188 95998720 -49590568 + L1ME1 LINE L1 4521 5070 -1076 3230 223 32 44 chr10 95999139 95999289 -49589999 + L1ME1 LINE L1 5122 5272 -894 5612 110 46 1 chr10 95999289 96000532 -49588756 + L1PA14 LINE L1 4873 6159 -2 3230 223 32 44 chr10 96000532 96001436 -49587852 + L1ME1 LINE L1 5272 6161 -5 2377 96 3 0 chr10 96001456 96001757 -49587531 + AluSp SINE Alu 1 302 -11 197 292 32 82 chr10 96004255 96004424 -49584864 - MIR SINE MIR -76 132 18 2251 128 0 0 chr10 96005597 96005909 -49583379 - AluSx SINE Alu 0 312 1 21 0 0 0 chr10 96010313 96010334 -49578954 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr10 96010612 96010634 -49578654 + AT_rich Low_complexity Low_complexity 1 22 0 2455 182 51 57 chr10 96011180 96011790 -49577498 + L1MC4 LINE L1 7196 7801 -241 1078 202 45 52 chr10 96011787 96012074 -49577214 + L1MC4 LINE L1 7753 8037 -5 * 412 310 32 28 chr10 96012103 96012319 -49576969 + L1MC4 LINE L1 7636 7852 -190 22 0 0 0 chr10 96012711 96012733 -49576555 + AT_rich Low_complexity Low_complexity 1 22 0 309 82 82 0 chr10 96013829 96013878 -49575410 + MADE1 DNA Mariner 1 53 -27 310 298 0 66 chr10 96014139 96014260 -49575028 - L1MC4 LINE L1 -1335 6707 6595 328 348 22 34 chr10 96015284 96015389 -49573899 + MER5A DNA MER1_type 10 114 -75 1179 188 37 94 chr10 96015389 96015846 -49573442 + MSTB1 LTR MaLR 2 432 0 328 348 22 34 chr10 96015846 96015918 -49573370 + MER5A DNA MER1_type 114 185 -4 290 238 40 56 chr10 96016123 96016249 -49573039 - L1MC5 LINE L1 -48 7913 7790 2009 158 7 0 chr10 96016286 96016596 -49572692 + AluSx SINE Alu 1 312 0 22 35 0 0 chr10 96016669 96016698 -49572590 + AT_rich Low_complexity Low_complexity 1 29 0 205 229 108 48 chr10 96016780 96016863 -49572425 + MIR SINE MIR 166 253 -9 1061 244 73 99 chr10 96016890 96017366 -49571922 + MLT1F1 LTR MaLR 1 464 -103 870 232 49 52 chr10 96017369 96017675 -49571613 + L1MC4 LINE L1 5707 6011 -1797 1178 248 78 120 chr10 96017723 96018030 -49571258 + L1MC4 LINE L1 6137 6456 -1586 360 0 0 0 chr10 96018030 96018070 -49571218 + (TG)n Simple_repeat Simple_repeat 2 41 0 1178 248 78 120 chr10 96018070 96019075 -49570213 + L1MC4 LINE L1 6456 7447 -595 753 168 45 109 chr10 96019075 96019277 -49570011 + MER5A DNA MER1_type 1 189 0 1178 248 78 120 chr10 96019277 96019712 -49569576 + L1MC4 LINE L1 7447 7899 -143 44 46 0 0 chr10 96019726 96019791 -49569497 + AT_rich Low_complexity Low_complexity 1 65 0 204 40 0 0 chr10 96020444 96020469 -49568819 + (CA)n Simple_repeat Simple_repeat 2 26 0 813 290 15 23 chr10 96021413 96021672 -49567616 + MIR SINE MIR 6 262 0 342 285 49 32 chr10 96022482 96022605 -49566683 + L2 LINE L2 3148 3272 0 290 169 15 0 chr10 96022644 96022709 -49566579 + GA-rich Low_complexity Low_complexity 5 70 0 343 328 106 76 chr10 96022813 96023115 -49566173 + L3b LINE CR1 1207 1517 -66 1932 98 0 15 chr10 96023783 96024048 -49565240 + AluSg SINE Alu 35 295 -15 29 28 0 0 chr10 96024073 96024109 -49565179 + AT_rich Low_complexity Low_complexity 1 36 0 239 245 32 43 chr10 96024120 96024214 -49565074 - MIR SINE MIR -46 216 124 1372 273 150 19 chr10 96024478 96025017 -49564271 - L2 LINE L2 -820 2494 1885 635 226 18 0 chr10 96025064 96025228 -49564060 - L1ME4a LINE L1 -275 5846 5680 186 331 41 35 chr10 96025841 96026010 -49563278 + L2 LINE L2 2812 2981 -291 469 335 7 7 chr10 96026030 96026185 -49563103 + MIR SINE MIR 47 201 -61 507 281 25 20 chr10 96026375 96026578 -49562710 - L1MC4a LINE L1 -1883 5925 5722 746 264 119 14 chr10 96026883 96027172 -49562116 - L1MC4a LINE L1 -498 5672 5350 3315 157 70 20 chr10 96027212 96027251 -49562037 - L1MB1 LINE L1 -3 6165 6129 2165 147 21 19 chr10 96027251 96027625 -49561663 - THE1C LTR MaLR 0 375 1 3315 157 70 20 chr10 96027625 96028223 -49561065 - L1MB1 LINE L1 -39 6129 5496 28 0 0 0 chr10 96028425 96028453 -49560835 + AT_rich Low_complexity Low_complexity 1 28 0 637 371 17 42 chr10 96028523 96028925 -49560363 + L2 LINE L2 2866 3257 -15 2201 146 5 45 chr10 96028994 96029397 -49559891 + MLT1B LTR MaLR 4 390 0 201 312 70 25 chr10 96031905 96032062 -49557226 - MIR SINE MIR 0 262 99 508 284 49 12 chr10 96032203 96032365 -49556923 - MER5B DNA MER1_type -1 177 10 21 0 0 0 chr10 96032596 96032617 -49556671 + AT_rich Low_complexity Low_complexity 1 21 0 243 68 0 81 chr10 96032872 96032946 -49556342 + (TA)n Simple_repeat Simple_repeat 1 68 0 391 292 83 88 chr10 96035854 96036193 -49553095 + L3b LINE CR1 1111 1447 -136 211 139 28 0 chr10 96037541 96037577 -49551711 + (TATAG)n Simple_repeat Simple_repeat 2 38 0 910 168 6 0 chr10 96037757 96037918 -49551370 - MER3 DNA MER1_type -46 163 2 273 71 0 18 chr10 96038152 96038208 -49551080 - LTR66 LTR ERVL -171 439 385 27 0 0 0 chr10 96038215 96038242 -49551046 + AT_rich Low_complexity Low_complexity 1 27 0 29 28 0 0 chr10 96038640 96038676 -49550612 + AT_rich Low_complexity Low_complexity 1 36 0 897 263 97 97 chr10 96039516 96039673 -49549615 + HAL1 LINE L1 2 158 -2349 1820 162 0 10 chr10 96039673 96039969 -49549319 + AluJo SINE Alu 4 296 -16 897 263 97 97 chr10 96039969 96040525 -49548763 + HAL1 LINE L1 157 715 -1792 607 281 23 6 chr10 96040527 96040698 -49548590 + MER91A DNA MER1_type 1 174 -22 206 370 0 0 chr10 96040725 96040779 -49548509 + MER91A DNA MER1_type 142 195 -1 533 259 61 31 chr10 96040882 96041241 -49548047 + HAL1 LINE L1 788 1196 -1311 1173 267 119 39 chr10 96041311 96041751 -49547537 + HAL1 LINE L1 1392 1890 -617 2227 94 0 29 chr10 96041751 96042059 -49547229 + AluSx SINE Alu 1 299 -13 1173 267 119 39 chr10 96042059 96042187 -49547101 + HAL1 LINE L1 1890 2006 -501 255 196 65 28 chr10 96042893 96043000 -49546288 - L1MC5 LINE L1 -37 7924 7814 465 265 98 39 chr10 96043286 96043490 -49545798 + MIR SINE MIR 41 256 -6 316 282 36 9 chr10 96043491 96043601 -49545687 - L1MDa LINE L1 -3970 2570 2458 184 314 50 75 chr10 96045699 96045858 -49543430 - L2 LINE L2 -8 3305 3151 230 418 6 12 chr10 96046717 96046887 -49542401 - L2 LINE L2 -557 2757 2589 340 335 114 12 chr10 96047025 96047350 -49541938 - L2 LINE L2 -1036 2278 1921 204 347 32 11 chr10 96047472 96047567 -49541721 + MIR SINE MIR 51 147 -61 293 372 84 4 chr10 96047672 96047898 -49541390 + MIR SINE MIR 13 256 -6 298 262 26 8 chr10 96048036 96048135 -49541153 + MIR SINE MIR 24 124 -84 203 263 118 0 chr10 96048300 96048376 -49540912 + MIR SINE MIR 178 262 0 1319 58 29 0 chr10 96048621 96048795 -49540493 + L1PA11 LINE L1 5994 6172 -2 559 312 35 10 chr10 96049210 96049412 -49539876 + MIR SINE MIR 14 220 -42 * 1264 277 122 23 chr10 96049411 96050183 -49539105 + L2 LINE L2 2452 3311 -2 351 328 61 21 chr10 96050500 96050826 -49538462 + L1MB2 LINE L1 5595 5933 -238 * 1887 223 28 47 chr10 96050536 96051074 -49538214 + L1ME3A LINE L1 5638 6165 -5 279 312 32 32 chr10 96052729 96052854 -49536434 + L2 LINE L2 3148 3272 0 384 278 124 22 chr10 96053499 96053772 -49535516 - MARNA DNA Mariner -13 573 273 297 223 125 45 chr10 96053885 96053997 -49535291 - MARNA DNA Mariner -457 129 9 676 276 71 27 chr10 96057174 96057399 -49531889 + MIR SINE MIR 28 262 0 2289 131 17 3 chr10 96058494 96058853 -49530435 - THE1B LTR MaLR 0 364 1 28 0 0 0 chr10 96059156 96059184 -49530104 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr10 96059351 96059381 -49529907 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr10 96059525 96059553 -49529735 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr10 96059590 96059618 -49529670 + AT_rich Low_complexity Low_complexity 1 28 0 1316 140 8 0 chr10 96060875 96061111 -49528177 + L1MA7 LINE L1 6053 6290 -1 2271 99 3 3 chr10 96061168 96061480 -49527808 + AluSx SINE Alu 1 312 0 1878 133 4 0 chr10 96061557 96061821 -49527467 + AluSx SINE Alu 22 286 -26 378 150 50 0 chr10 96061821 96061941 -49527347 + (TA)n Simple_repeat Simple_repeat 1 126 0 21 0 0 0 chr10 96062366 96062387 -49526901 + AT_rich Low_complexity Low_complexity 1 21 0 1728 177 0 35 chr10 96062463 96062773 -49526515 + AluJo SINE Alu 2 300 -12 249 347 21 11 chr10 96062907 96063002 -49526286 - MIR3 SINE MIR -10 198 103 372 226 73 58 chr10 96063993 96064130 -49525158 - MIR3 SINE MIR -3 205 67 21 36 0 0 chr10 96064479 96064507 -49524781 + AT_rich Low_complexity Low_complexity 1 28 0 708 224 29 29 chr10 96065226 96065431 -49523857 - MIR SINE MIR -14 248 44 202 345 100 0 chr10 96065517 96065627 -49523661 + L2 LINE L2 3139 3259 -13 203 167 0 21 chr10 96065899 96065947 -49523341 + (CATA)n Simple_repeat Simple_repeat 2 48 0 21 0 0 0 chr10 96067219 96067240 -49522048 + AT_rich Low_complexity Low_complexity 1 21 0 2538 236 87 159 chr10 96067598 96068161 -49521127 + L2 LINE L2 1198 1800 -1513 679 197 84 18 chr10 96068161 96068378 -49520910 + MER106B DNA MER1_type 5 1059 0 2538 236 87 159 chr10 96068378 96068496 -49520792 + L2 LINE L2 1800 1925 -1388 1876 159 135 5 chr10 96068496 96068873 -49520415 + MSTB LTR MaLR 1 426 0 2538 236 87 159 chr10 96068873 96070245 -49519043 + L2 LINE L2 1925 3308 -5 450 266 182 21 chr10 96071412 96071604 -49517684 + MIR SINE MIR 33 255 -7 303 28 0 0 chr10 96072847 96072883 -49516405 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 228 340 39 78 chr10 96072889 96073141 -49516147 - L2 LINE L2 -23 3290 3051 836 146 6 0 chr10 96073141 96073299 -49515989 - L1MA4 LINE L1 -5 6295 6137 228 340 39 78 chr10 96073299 96073355 -49515933 - L2 LINE L2 -262 3051 2994 348 24 0 0 chr10 96074139 96074180 -49515108 + (CA)n Simple_repeat Simple_repeat 2 42 0 692 291 58 53 chr10 96074546 96075600 -49513688 + L1MC4a LINE L1 4791 5398 -748 236 228 0 51 chr10 96076007 96076086 -49513202 + L1M4 LINE L1 2371 2445 -3939 365 291 80 25 chr10 96076134 96076460 -49512828 + L1M4 LINE L1 4600 4943 -1439 327 49 0 0 chr10 96077513 96077554 -49511734 + (CA)n Simple_repeat Simple_repeat 2 42 0 271 289 99 4 chr10 96077772 96077901 -49511387 + MIR SINE MIR 4 205 -57 2490 66 3 0 chr10 96078936 96079239 -49510049 - AluSc SINE Alu -5 304 1 27 62 0 0 chr10 96079417 96079465 -49509823 + AT_rich Low_complexity Low_complexity 1 48 0 15208 135 7 8 chr10 96079616 96082096 -49507192 + L1PA8 LINE L1 1450 3926 -2220 41474 53 3 25 chr10 96082104 96088377 -49500911 + L1PA5 LINE L1 11 6139 -15 216 0 0 0 chr10 96088377 96088401 -49500887 + (TA)n Simple_repeat Simple_repeat 2 25 0 * 342 0 0 0 chr10 96088400 96088438 -49500850 + (TG)n Simple_repeat Simple_repeat 1 38 0 9436 98 10 16 chr10 96088438 96090583 -49498705 + L1PA8 LINE L1 3914 6044 -128 533 123 12 0 chr10 96092779 96092860 -49496428 - L1MB7 LINE L1 -246 5922 5841 * 1054 165 21 79 chr10 96092856 96093135 -49496153 + L1MB7 LINE L1 5917 6179 -5 227 179 0 0 chr10 96093368 96093407 -49495881 + MER5B DNA MER1_type 1 39 -139 690 225 56 0 chr10 96093489 96093649 -49495639 + MER5A DNA MER1_type 2 170 -19 491 148 0 0 chr10 96094327 96094408 -49494880 + L1P LINE L1 4874 4954 -1192 473 73 0 0 chr10 96094408 96094470 -49494818 + L1PA14 LINE L1 6092 6159 -2 901 251 34 26 chr10 96094514 96094865 -49494423 + L1M4 LINE L1 3431 3784 -2362 1094 205 24 79 chr10 96095418 96095591 -49493697 + L1MA10 LINE L1 5982 6128 -206 1706 190 6 19 chr10 96095591 96095907 -49493381 - AluJo SINE Alu 0 312 1 1094 205 24 79 chr10 96095907 96096104 -49493184 + L1MA10 LINE L1 6128 6334 0 289 315 0 0 chr10 96096106 96096179 -49493109 + L3 LINE CR1 1500 1572 -5 211 303 124 11 chr10 96098301 96098479 -49490809 + L2 LINE L2 3116 3313 0 1970 128 0 0 chr10 96098484 96098749 -49490539 + AluSx SINE Alu 1 265 -47 306 167 0 30 chr10 96099767 96099833 -49489455 - L1MC4 LINE L1 -1339 6703 6640 233 139 0 0 chr10 96099833 96099876 -49489412 + LTR66 LTR ERVL 398 440 -170 222 171 0 0 chr10 96099880 96099921 -49489367 + (TATATG)n Simple_repeat Simple_repeat 4 44 0 726 185 79 17 chr10 96099923 96100101 -49489187 + MER5A DNA MER1_type 1 189 0 746 296 56 47 chr10 96100371 96100922 -49488366 + L2 LINE L2 2708 3258 -55 393 365 83 0 chr10 96102034 96102215 -49487073 + MIR SINE MIR 62 257 -5 269 301 68 45 chr10 96102872 96103005 -49486283 - MIR SINE MIR -110 152 17 28 0 0 0 chr10 96103089 96103117 -49486171 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr10 96103255 96103283 -49486005 + AT_rich Low_complexity Low_complexity 1 28 0 444 294 101 8 chr10 96103452 96103571 -49485717 + L2 LINE L2 3184 3313 0 3259 130 67 17 chr10 96103604 96104189 -49485099 - MER39B LTR ERV1 -35 618 5 1581 218 52 97 chr10 96104367 96104904 -49484384 + MLT2B1 LTR ERVL 1 513 -7 768 283 100 57 chr10 96105248 96105916 -49483372 + L1MC4a LINE L1 5278 5974 -1834 217 100 40 0 chr10 96105916 96105966 -49483322 + (TA)n Simple_repeat Simple_repeat 1 52 0 257 200 307 0 chr10 96106699 96106774 -49482514 - MIR SINE MIR -1 261 164 205 138 0 0 chr10 96107460 96107489 -49481799 + (CCCCCG)n Simple_repeat Simple_repeat 3 31 0 307 287 74 9 chr10 96108354 96108462 -49480826 + MIR SINE MIR 87 201 -61 306 306 94 55 chr10 96108531 96108786 -49480502 + L1 LINE L1 4068 4332 -1814 1188 161 13 40 chr10 96109219 96109443 -49479845 - AluJb SINE Alu -10 302 85 290 292 76 60 chr10 96109710 96109895 -49479393 - MIR3 SINE MIR -6 202 15 636 114 0 0 chr10 96110264 96110352 -49478936 - HY4 scRNA scRNA -3 90 3 226 356 227 11 chr10 96110358 96110622 -49478666 + L2 LINE L2 2593 2913 -401 476 263 69 94 chr10 96111046 96111365 -49477923 + L2 LINE L2 2951 3261 -52 440 136 0 0 chr10 96111480 96111546 -49477742 - L1P LINE L1 -718 5413 5348 3241 166 100 5 chr10 96112536 96113313 -49475975 - Charlie5 DNA MER1_type -116 2496 1646 661 116 91 0 chr10 96113316 96113437 -49475851 - Charlie5 DNA MER1_type -2448 164 33 278 298 64 0 chr10 96113657 96113751 -49475537 - MER94 DNA DNA -23 111 12 491 319 47 18 chr10 96114371 96114540 -49474748 - MIR SINE MIR -29 233 60 468 327 60 7 chr10 96114986 96115136 -49474152 + MIR SINE MIR 20 177 -85 229 320 6 13 chr10 96115505 96115661 -49473627 + (TA)n Simple_repeat Simple_repeat 1 155 0 221 327 18 35 chr10 96115736 96115849 -49473439 + L2 LINE L2 3203 3313 0 275 200 7 51 chr10 96116574 96116641 -49472647 + MIR SINE MIR 14 81 -127 1017 281 45 37 chr10 96117011 96117392 -49471896 - LTR16A1 LTR ERVL 0 457 74 635 304 149 10 chr10 96117574 96117962 -49471326 - ERVL LTR ERVL -505 5259 4818 21 0 0 0 chr10 96118289 96118310 -49470978 + AT_rich Low_complexity Low_complexity 1 21 0 959 273 83 20 chr10 96119271 96119766 -49469522 - L1M4 LINE L1 -1254 4892 4367 772 232 84 55 chr10 96119775 96120228 -49469060 - L1MC5 LINE L1 -30 7931 7466 250 195 52 0 chr10 96120283 96120360 -49468928 + (TA)n Simple_repeat Simple_repeat 1 81 0 322 322 0 0 chr10 96120360 96120450 -49468838 + L1MC4 LINE L1 6614 6703 -1339 * 369 278 0 0 chr10 96120370 96120460 -49468828 - L1MC4 LINE L1 -1339 6703 6614 427 236 60 20 chr10 96120480 96120676 -49468612 - L1ME1 LINE L1 -122 6044 5794 3400 188 9 7 chr10 96121152 96121833 -49467455 - L1M4 LINE L1 -3338 2808 2127 3309 96 43 2 chr10 96121842 96122352 -49466936 - L1PBa LINE L1 -4116 2747 2217 874 320 68 23 chr10 96123515 96123958 -49465330 + L2 LINE L2 2425 2887 -427 781 291 75 11 chr10 96125182 96125533 -49463755 + L2 LINE L2 2577 2953 -319 * 933 224 11 0 chr10 96125514 96125693 -49463595 + MER5A DNA MER1_type 7 187 -2 1066 251 137 40 chr10 96125734 96126137 -49463151 - LTR16A1 LTR ERVL -4 453 12 310 237 32 43 chr10 96126343 96126436 -49462852 + L2 LINE L2 3015 3106 -207 2025 229 37 22 chr10 96126444 96126986 -49462302 - L1ME1 LINE L1 -6 6160 5611 1229 212 36 23 chr10 96126987 96127304 -49461984 + MLT1A1 LTR MaLR 2 426 -41 928 243 58 12 chr10 96127404 96127663 -49461625 - L1ME1 LINE L1 -581 5585 5315 1122 253 49 37 chr10 96127667 96128074 -49461214 - L1MD3 LINE L1 -20 7975 7564 990 180 49 35 chr10 96128153 96128437 -49460851 - L1ME1 LINE L1 -914 5232 4945 351 281 14 82 chr10 96128759 96128905 -49460383 - MIR3 SINE MIR -1 207 72 411 139 0 35 chr10 96128937 96129023 -49460265 - LTR30 LTR ERV1 -98 624 542 202 250 22 22 chr10 96130534 96130626 -49458662 + CT-rich Low_complexity Low_complexity 4 95 0 794 234 151 78 chr10 96131965 96132084 -49457204 - L1ME3A LINE L1 -311 5928 5819 715 188 0 0 chr10 96132084 96132217 -49457071 - FLAM_C SINE Alu 0 133 1 794 234 151 78 chr10 96132217 96132495 -49456793 - L1ME3A LINE L1 -420 5819 5502 855 150 0 0 chr10 96132495 96132628 -49456660 - AluSg/x SINE Alu -6 304 172 1033 113 0 7 chr10 96132629 96132770 -49456518 - AluSq SINE Alu -66 247 108 570 229 13 13 chr10 96132792 96132945 -49456343 - L1ME3A LINE L1 -745 5486 5334 426 308 39 0 chr10 96132956 96133112 -49456176 - L1ME3A LINE L1 -980 5235 5074 194 0 39 0 chr10 96134210 96134236 -49455052 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 341 112 19 47 chr10 96137427 96137534 -49451754 + (TTATA)n Simple_repeat Simple_repeat 3 106 0 2092 165 59 0 chr10 96137702 96137986 -49451302 - L1MA9 LINE L1 -71 6241 5924 180 0 0 0 chr10 96137986 96138006 -49451282 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 2092 165 59 0 chr10 96138006 96138126 -49451162 - L1MA9 LINE L1 -388 5924 5813 230 192 0 55 chr10 96138126 96138199 -49451089 + LTR66 LTR ERVL 370 438 -172 216 158 0 0 chr10 96138199 96138237 -49451051 + (CA)n Simple_repeat Simple_repeat 1 38 0 331 296 25 25 chr10 96138344 96138543 -49450745 - L1ME3A LINE L1 -4087 2309 2111 339 284 114 63 chr10 96138770 96139182 -49450106 - L1ME3A LINE L1 -4654 1482 805 1258 200 138 22 chr10 96139228 96139453 -49449835 - MSTD LTR MaLR 0 396 114 1925 130 4 0 chr10 96139453 96139730 -49449558 - AluSx SINE Alu -8 304 27 1258 200 138 22 chr10 96139730 96139859 -49449429 - MSTD LTR MaLR -282 114 1 44 94 0 0 chr10 96140894 96141022 -49448266 + AT_rich Low_complexity Low_complexity 1 128 0 2174 135 0 0 chr10 96141318 96141621 -49447667 + AluSx SINE Alu 1 303 -9 427 248 91 16 chr10 96141850 96141971 -49447317 + L2 LINE L2 3182 3311 -2 391 362 20 20 chr10 96142018 96142214 -49447074 + MIR SINE MIR 2 197 -65 2097 270 80 67 chr10 96142431 96143704 -49445584 - L2 LINE L2 0 3313 1861 194 241 37 19 chr10 96144671 96144725 -49444563 - MIR SINE MIR -207 55 1 473 243 10 0 chr10 96146308 96146411 -49442877 + L1MCa LINE L1 19 122 -6304 2109 187 53 0 chr10 96146432 96146812 -49442476 + L1MCa LINE L1 360 759 -5667 740 177 0 0 chr10 96146813 96146937 -49442351 + L1MC1 LINE L1 6196 6319 -14 2021 148 34 31 chr10 96147254 96147688 -49441600 + MER51B LTR ERV1 1 377 0 2460 66 0 3 chr10 96148129 96148432 -49440856 + AluSc SINE Alu 3 304 -5 1647 241 90 15 chr10 96148782 96149495 -49439793 + L1M4 LINE L1 4264 5109 -1037 7478 114 45 4 chr10 96149495 96150797 -49438491 + L1PBa LINE L1 1337 2692 -4171 1058 154 0 0 chr10 96151760 96151922 -49437366 - AluSg/x SINE Alu -24 288 127 572 241 152 0 chr10 96152041 96152199 -49437089 - MIR SINE MIR -44 218 37 225 0 0 0 chr10 96152473 96152498 -49436790 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 1982 110 0 0 chr10 96152508 96152771 -49436517 - AluSx SINE Alu -49 263 1 844 223 0 6 chr10 96153293 96153459 -49435829 - AluJo SINE Alu -147 165 1 23 33 0 0 chr10 96153782 96153812 -49435476 + AT_rich Low_complexity Low_complexity 1 30 0 915 291 99 83 chr10 96154510 96154885 -49434403 - L2 LINE L2 -614 2700 2308 974 211 156 46 chr10 96154885 96155212 -49434076 - MLT1A1 LTR MaLR -2 363 1 915 291 99 83 chr10 96155212 96155489 -49433799 - L2 LINE L2 -1006 2308 2037 1213 138 0 0 chr10 96155616 96155790 -49433498 + AluSx SINE Alu 1 174 -138 21 0 0 0 chr10 96156387 96156408 -49432880 + AT_rich Low_complexity Low_complexity 1 21 0 746 159 0 0 chr10 96157566 96157679 -49431609 + Tigger3(Golem) DNA MER2_type 2926 3038 0 1877 166 0 0 chr10 96157738 96158057 -49431231 + AluJb SINE Alu 3 312 0 2314 98 3 0 chr10 96158407 96158712 -49430576 - AluSp SINE Alu -7 306 1 1620 171 0 32 chr10 96159367 96159647 -49429641 + AluSx SINE Alu 34 304 -8 499 336 17 38 chr10 96160158 96160396 -49428892 + LTR16A LTR ERVL 95 327 -123 181 306 0 0 chr10 96160515 96160564 -49428724 + MIR SINE MIR 27 75 -187 3017 173 40 26 chr10 96160707 96161387 -49427901 - L1P3 LINE L1 -4734 1141 990 7341 120 43 14 chr10 96161615 96162292 -49426996 - Tigger1 DNA MER2_type -868 1550 822 1902 176 14 24 chr10 96162292 96162707 -49426581 - L1MA4 LINE L1 -5 6295 5885 7341 120 43 14 chr10 96162707 96163213 -49426075 - Tigger1 DNA MER2_type -1596 822 332 209 243 0 54 chr10 96163386 96163460 -49425828 + GA-rich Low_complexity Low_complexity 3 72 0 441 270 75 31 chr10 96164008 96164167 -49425121 + MIR3 SINE MIR 41 206 -2 22 0 0 0 chr10 96164333 96164355 -49424933 + AT_rich Low_complexity Low_complexity 1 22 0 207 100 0 0 chr10 96164432 96164462 -49424826 + (T)n Simple_repeat Simple_repeat 1 30 0 1820 149 11 0 chr10 96164725 96165001 -49424287 + AluSx SINE Alu 16 294 -18 1040 358 72 27 chr10 96165700 96166490 -49422798 + L2 LINE L2 2152 2977 -337 689 174 0 8 chr10 96167074 96167195 -49422093 + FLAM_C SINE Alu 4 123 -20 448 309 164 43 chr10 96167658 96168418 -49420870 + L2 LINE L2 2328 3294 -19 380 335 26 13 chr10 96168443 96168598 -49420690 - MER5A DNA MER1_type -32 157 1 192 77 0 0 chr10 96168829 96168855 -49420433 + (T)n Simple_repeat Simple_repeat 1 26 0 25 31 0 0 chr10 96169785 96169817 -49419471 + AT_rich Low_complexity Low_complexity 1 32 0 248 309 105 68 chr10 96169850 96170012 -49419276 + MIR3 SINE MIR 35 202 -6 215 340 0 0 chr10 96170174 96170224 -49419064 + L2 LINE L2 3134 3183 -89 255 152 0 0 chr10 96170305 96170351 -49418937 + GA-rich Low_complexity Low_complexity 2 47 0 1956 199 100 28 chr10 96171131 96171709 -49417579 + L1ME1 LINE L1 5543 6162 -4 1854 151 3 3 chr10 96172047 96172358 -49416930 + AluSx SINE Alu 1 311 0 536 217 33 8 chr10 96172418 96172538 -49416750 + AluJb SINE Alu 180 302 -10 245 183 17 0 chr10 96172560 96172620 -49416668 + GA-rich Low_complexity Low_complexity 4 64 0 491 305 121 0 chr10 96172637 96172827 -49416461 - MIR SINE MIR -1 261 49 275 277 72 0 chr10 96172811 96172894 -49416394 - L2 LINE L2 -999 2315 2227 * 263 175 49 21 chr10 96172987 96173130 -49416158 + (TA)n Simple_repeat Simple_repeat 1 147 0 271 267 10 50 chr10 96173534 96173635 -49415653 - LTR33A LTR ERVL 0 523 427 488 187 75 0 chr10 96174225 96174332 -49414956 + Charlie1 DNA MER1_type 2411 2525 -236 362 128 75 53 chr10 96174334 96174428 -49414860 + Charlie1 DNA MER1_type 2666 2761 0 24 53 0 0 chr10 96175294 96175332 -49413956 + AT_rich Low_complexity Low_complexity 1 38 0 2335 93 0 0 chr10 96175543 96175833 -49413455 - AluSx SINE Alu -21 291 2 22 56 0 0 chr10 96176915 96176951 -49412337 + AT_rich Low_complexity Low_complexity 1 36 0 28 61 0 0 chr10 96177111 96177160 -49412128 + AT_rich Low_complexity Low_complexity 1 49 0 1506 17 11 0 chr10 96177508 96177687 -49411601 - L1PA5 LINE L1 -3 6151 5971 24 32 0 0 chr10 96178164 96178195 -49411093 + AT_rich Low_complexity Low_complexity 1 31 0 2133 171 13 5 chr10 96178282 96178667 -49410621 + MLT1B LTR MaLR 3 390 0 189 0 0 0 chr10 96180090 96180111 -49409177 + (TA)n Simple_repeat Simple_repeat 2 22 0 1601 178 30 0 chr10 96181313 96181582 -49407706 + AluJb SINE Alu 1 277 -35 745 261 65 14 chr10 96181746 96182037 -49407251 + L1ME3 LINE L1 5004 5309 -837 1948 151 3 16 chr10 96182050 96182355 -49406933 + AluSx SINE Alu 11 311 -1 2671 256 18 37 chr10 96182370 96182484 -49406804 + L1ME3 LINE L1 5293 5408 -754 1719 104 0 4 chr10 96182484 96182714 -49406574 + AluSq SINE Alu 69 297 -16 2671 256 18 37 chr10 96182714 96183485 -49405803 + L1ME3 LINE L1 5408 6161 -1 459 304 116 5 chr10 96183504 96183728 -49405560 + L2 LINE L2 1935 2183 -1131 352 301 62 57 chr10 96183728 96183904 -49405384 + MER5B DNA MER1_type 1 177 -1 1401 299 90 33 chr10 96183904 96184982 -49404306 + L2 LINE L2 2175 3313 0 551 278 66 62 chr10 96185019 96185278 -49404010 - MIR SINE MIR 0 262 3 260 55 73 0 chr10 96185509 96185564 -49403724 + (TA)n Simple_repeat Simple_repeat 2 60 0 231 311 24 92 chr10 96185589 96185753 -49403535 - L2 LINE L2 -113 3159 3007 6878 66 10 2 chr10 96185791 96187061 -49402227 + L1PA7 LINE L1 4847 6125 -29 23 54 0 0 chr10 96187101 96187138 -49402150 + AT_rich Low_complexity Low_complexity 1 37 0 860 77 0 0 chr10 96187184 96187301 -49401987 - L1PA13 LINE L1 -3 6160 6044 613 276 83 0 chr10 96188476 96188657 -49400631 + MIR SINE MIR 3 198 -64 326 296 68 0 chr10 96188660 96188792 -49400496 - MIR SINE MIR -1 261 121 2017 107 23 7 chr10 96189148 96189447 -49399841 - AluSg SINE Alu -6 304 1 240 311 26 118 chr10 96189609 96189915 -49399373 - L3 LINE CR1 -113 1464 1187 890 229 42 5 chr10 96189985 96190177 -49399111 + AluJo SINE Alu 1 199 -113 302 206 14 0 chr10 96191108 96191181 -49398107 + CT-rich Low_complexity Low_complexity 4 77 0 257 294 37 64 chr10 96191408 96191517 -49397771 - L2 LINE L2 -199 3073 2968 248 260 120 0 chr10 96191597 96191697 -49397591 - L1ME4a LINE L1 -31 6090 5979 465 209 8 54 chr10 96191707 96191836 -49397452 - L1MA10 LINE L1 -1 6333 6211 422 377 115 0 chr10 96192671 96192923 -49396365 - L2 LINE L2 -382 2932 2652 437 294 152 5 chr10 96193440 96193624 -49395664 - MIR SINE MIR -48 214 4 982 281 97 57 chr10 96193642 96194336 -49394952 - L2 LINE L2 0 3313 2576 653 293 47 39 chr10 96194607 96194839 -49394449 - MIR SINE MIR -13 249 16 26 74 0 0 chr10 96194901 96194955 -49394333 + AT_rich Low_complexity Low_complexity 1 54 0 189 214 0 0 chr10 96195761 96195803 -49393485 + GA-rich Low_complexity Low_complexity 1 42 0 414 0 0 0 chr10 96196036 96196082 -49393206 + (CA)n Simple_repeat Simple_repeat 2 47 0 204 40 0 0 chr10 96196081 96196106 -49393182 + (TC)n Simple_repeat Simple_repeat 1 25 0 * 210 213 21 21 chr10 96196469 96196516 -49392772 + MIR SINE MIR 118 164 -98 2326 76 7 0 chr10 96197589 96197878 -49391410 - AluY SINE Alu -20 291 1 296 231 265 26 chr10 96198009 96198126 -49391162 + MIR SINE MIR 91 235 -27 397 291 77 53 chr10 96198638 96198834 -49390454 + MIR SINE MIR 13 212 -50 1237 34 0 0 chr10 96199246 96199394 -49389894 - L1PA4 LINE L1 -3 6152 6005 408 264 250 7 chr10 96201533 96201677 -49387611 + MER5A DNA MER1_type 10 188 -1 393 22 0 0 chr10 96202671 96202717 -49386571 + (TTA)n Simple_repeat Simple_repeat 2 47 0 920 238 118 55 chr10 96203810 96204210 -49385078 - L1MC5 LINE L1 -71 7890 7450 2154 121 3 0 chr10 96204210 96204507 -49384781 - AluSg SINE Alu -12 298 1 920 238 118 55 chr10 96204507 96204615 -49384673 - L1MC5 LINE L1 -511 7450 7350 907 146 0 0 chr10 96204692 96204829 -49384459 - L1PB4 LINE L1 -5 6151 6015 628 200 79 42 chr10 96204836 96205001 -49384287 - MER20 DNA MER1_type -45 174 4 24 0 0 0 chr10 96205033 96205057 -49384231 + AT_rich Low_complexity Low_complexity 1 24 0 479 231 178 65 chr10 96205109 96205464 -49383824 - L1MC5 LINE L1 -722 7239 6845 341 247 139 57 chr10 96205466 96205624 -49383664 - L1MC4a LINE L1 -1021 6787 6617 501 352 45 6 chr10 96206151 96206330 -49382958 - MIR3 SINE MIR -7 201 16 1957 142 14 0 chr10 96206822 96207136 -49382152 + AluSx SINE Alu 1 312 0 334 250 180 8 chr10 96207420 96207548 -49381740 + MIR SINE MIR 36 185 -77 26 0 0 0 chr10 96208057 96208083 -49381205 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr10 96209150 96209172 -49380116 + AT_rich Low_complexity Low_complexity 1 22 0 26 64 0 0 chr10 96209222 96209269 -49380019 + AT_rich Low_complexity Low_complexity 1 47 0 477 274 65 89 chr10 96209315 96209479 -49379809 - L2 LINE L2 -77 3236 3078 2092 169 7 14 chr10 96209479 96209898 -49379390 - L1MA3 LINE L1 0 6305 5890 477 274 65 89 chr10 96209898 96209981 -49379307 - L2 LINE L2 -235 3078 2995 1516 229 111 18 chr10 96210041 96210483 -49378805 - LTR40a LTR ERVL -36 483 1 614 250 154 0 chr10 96210483 96210639 -49378649 - MER5A DNA MER1_type -9 180 1 195 313 36 0 chr10 96211673 96211756 -49377532 - MIR SINE MIR -41 221 136 27 49 0 0 chr10 96211758 96211799 -49377489 + AT_rich Low_complexity Low_complexity 1 41 0 22 0 0 0 chr10 96212293 96212315 -49376973 + AT_rich Low_complexity Low_complexity 1 22 0 506 176 46 0 chr10 96212428 96212536 -49376752 + L1MA3 LINE L1 21 133 -7432 * 16247 101 26 42 chr10 96212533 96213864 -49375424 + L1MA3 LINE L1 1099 2449 -5275 269 150 0 0 chr10 96213864 96213904 -49375384 + Alu SINE Alu 1 40 -262 1694 83 0 22 chr10 96213904 96214132 -49375156 + AluSg/x SINE Alu 86 308 -2 16247 101 26 42 chr10 96214132 96215136 -49374152 + L1MA3 LINE L1 2448 3466 -4258 1926 118 20 34 chr10 96215136 96215432 -49373856 + AluSx SINE Alu 1 292 -20 16247 101 26 42 chr10 96215432 96216090 -49373198 + L1MA3 LINE L1 3466 7724 0 629 277 43 47 chr10 96216178 96216643 -49372645 - L1MC5 LINE L1 -42 7919 7457 729 164 8 23 chr10 96218172 96218300 -49370988 + AluJb SINE Alu 6 131 -181 202 21 106 0 chr10 96218300 96218347 -49370941 + (TA)n Simple_repeat Simple_repeat 1 52 0 51 17 0 0 chr10 96218476 96218534 -49370754 + AT_rich Low_complexity Low_complexity 1 58 0 319 257 55 18 chr10 96218546 96218655 -49370633 - L1MC4 LINE L1 -1321 6721 6609 304 228 0 89 chr10 96218675 96218776 -49370512 + L1MC4 LINE L1 6612 6703 -1339 * 317 213 64 32 chr10 96218687 96218781 -49370507 - L1MC4 LINE L1 -1338 6704 6608 201 74 0 0 chr10 96218796 96218823 -49370465 + (TG)n Simple_repeat Simple_repeat 2 28 0 210 192 0 39 chr10 96218845 96218897 -49370391 + (TCTA)n Simple_repeat Simple_repeat 1 50 0 450 137 11 50 chr10 96218916 96219098 -49370190 + (TA)n Simple_repeat Simple_repeat 1 175 0 300 27 0 0 chr10 96219142 96219179 -49370109 + (TG)n Simple_repeat Simple_repeat 2 38 0 1715 115 200 27 chr10 96219646 96220011 -49369277 - MSTA LTR MaLR 0 428 1 514 229 78 22 chr10 96220831 96221010 -49368278 - MER5A DNA MER1_type 0 189 1 213 366 0 0 chr10 96221638 96221709 -49367579 - MIR SINE MIR -7 255 185 462 315 61 6 chr10 96221759 96221946 -49367342 + MIR SINE MIR 63 257 -5 335 309 168 0 chr10 96222195 96222344 -49366944 + MIR3 SINE MIR 32 205 -3 450 241 19 28 chr10 96222766 96222874 -49366414 + MER21B LTR ERV1 312 418 -445 501 165 0 18 chr10 96223812 96224035 -49365253 + L1MB3 LINE L1 6077 6297 0 682 262 7 0 chr10 96224296 96224437 -49364851 - FRAM SINE Alu -30 146 5 800 179 0 21 chr10 96224469 96224614 -49364674 - FLAM_C SINE Alu -1 142 1 281 317 87 0 chr10 96225814 96225918 -49363370 + MIR SINE MIR 89 201 -61 434 241 44 38 chr10 96226119 96226277 -49363011 + MER104 DNA Tc2 6 164 -16 2154 119 10 6 chr10 96227198 96227509 -49361779 + AluSx SINE Alu 1 312 0 393 311 72 36 chr10 96227852 96228019 -49361269 + MER45A DNA AcHobo 4 176 -2 21 0 0 0 chr10 96228064 96228085 -49361203 + AT_rich Low_complexity Low_complexity 1 21 0 27 0 0 0 chr10 96228180 96228207 -49361081 + AT_rich Low_complexity Low_complexity 1 27 0 25 31 0 0 chr10 96231852 96231884 -49357404 + AT_rich Low_complexity Low_complexity 1 32 0 2019 209 117 58 chr10 96231901 96232693 -49356595 - Charlie2 DNA MER1_type -16 2846 1993 2157 66 35 0 chr10 96232693 96232981 -49356307 - L1PA7 LINE L1 -1 6153 5856 2019 209 117 58 chr10 96232981 96233087 -49356201 - Charlie2 DNA MER1_type -869 1993 1895 565 304 105 36 chr10 96233132 96233408 -49355880 - Charlie2 DNA MER1_type -2452 330 36 234 304 84 59 chr10 96233420 96233812 -49355476 - L1ME LINE L1 -214 5907 5506 389 119 15 0 chr10 96233825 96233892 -49355396 - L1ME3 LINE L1 -2 6229 6162 1832 238 104 34 chr10 96233902 96234664 -49354624 - L1ME3 LINE L1 -158 6075 5257 891 192 44 15 chr10 96234664 96234867 -49354421 - L1MA9 LINE L1 -38 6274 6066 2037 151 6 6 chr10 96234870 96235182 -49354106 - AluSx SINE Alu 0 312 1 613 242 147 13 chr10 96235183 96235497 -49353791 - L1ME3 LINE L1 -951 5264 4909 413 267 53 111 chr10 96236479 96236704 -49352584 + MIR SINE MIR 1 212 -50 767 304 16 30 chr10 96236921 96237066 -49352222 - L1ME3 LINE L1 -1805 4410 4264 2084 109 0 31 chr10 96237066 96237395 -49351893 + AluSx SINE Alu 1 320 0 767 304 16 30 chr10 96237395 96237676 -49351612 - L1ME3 LINE L1 -1951 4264 3989 1268 247 88 26 chr10 96237887 96238535 -49350753 - L1ME3 LINE L1 -2587 3628 2941 * 1315 246 51 47 chr10 96238532 96239146 -49350142 - L1ME3 LINE L1 -3488 2727 2154 361 118 0 40 chr10 96239153 96239229 -49350059 + (TTTC)n Simple_repeat Simple_repeat 2 74 0 2294 105 3 0 chr10 96239760 96240064 -49349224 - AluSx SINE Alu -7 305 1 230 193 18 0 chr10 96241664 96241721 -49347567 + (TA)n Simple_repeat Simple_repeat 1 58 0 40 37 0 0 chr10 96241748 96241802 -49347486 + AT_rich Low_complexity Low_complexity 1 54 0 375 233 57 114 chr10 96242561 96242737 -49346551 - MIR SINE MIR -23 239 74 286 362 21 0 chr10 96242750 96242891 -49346397 - LTR16B LTR ERVL -320 144 1 1320 128 0 9 chr10 96243733 96243944 -49345344 + L1PA13 LINE L1 5950 6158 -5 24 77 0 0 chr10 96244297 96244349 -49344939 + AT_rich Low_complexity Low_complexity 1 52 0 1966 127 14 3 chr10 96245423 96245714 -49343574 + AluSq SINE Alu 1 294 -19 367 249 5 102 chr10 96245849 96246054 -49343234 - MER5A DNA MER1_type -3 186 2 537 241 56 144 chr10 96246107 96246277 -49343011 + MIR SINE MIR 13 152 -110 1756 175 3 13 chr10 96246277 96246592 -49342696 - AluJb SINE Alu 0 312 1 537 241 56 144 chr10 96246592 96246691 -49342597 + MIR SINE MIR 152 258 -4 230 248 80 16 chr10 96247052 96247177 -49342111 - L1ME4a LINE L1 -3 6118 5986 375 300 127 6 chr10 96247213 96247560 -49341728 - L1ME4a LINE L1 -201 5920 5532 221 208 0 38 chr10 96247703 96247756 -49341532 + CT-rich Low_complexity Low_complexity 4 54 0 242 181 181 14 chr10 96248379 96248451 -49340837 + LTR67 LTR ERVL 457 540 -17 187 214 243 0 chr10 96248792 96248862 -49340426 - MIR SINE MIR -1 261 175 327 348 94 6 chr10 96248966 96249147 -49340141 + MIR SINE MIR 15 211 -51 594 332 19 0 chr10 96249202 96249407 -49339881 + LTR33 LTR ERVL 7 215 -306 371 259 54 0 chr10 96249462 96249574 -49339714 + LTR33 LTR ERVL 304 421 -100 290 198 236 0 chr10 96249577 96249683 -49339605 + MER94 DNA DNA 4 134 0 1484 181 3 24 chr10 96249812 96250127 -49339161 + AluJb SINE Alu 1 309 0 313 368 75 9 chr10 96250586 96250798 -49338490 + L2 LINE L2 2411 2636 -678 202 308 0 15 chr10 96253316 96253381 -49335907 + T-rich Low_complexity Low_complexity 3 66 0 235 289 24 60 chr10 96253491 96253574 -49335714 + MIR SINE MIR 183 262 0 2227 54 7 7 chr10 96253687 96253995 -49335293 - AluY SINE Alu 0 309 2 423 239 0 28 chr10 96254003 96254112 -49335176 - MIR SINE MIR -51 211 106 373 240 163 8 chr10 96254181 96254310 -49334978 - MIR SINE MIR -111 151 3 201 147 0 0 chr10 96254804 96254838 -49334450 + (TG)n Simple_repeat Simple_repeat 2 35 0 454 246 16 25 chr10 96255120 96255242 -49334046 - MER5A DNA MER1_type -1 188 68 264 306 8 33 chr10 96255141 96255262 -49334026 + MER5A DNA MER1_type 34 151 -38 * 688 301 81 4 chr10 96256288 96256524 -49332764 + MIR SINE MIR 9 262 0 244 341 61 30 chr10 96257318 96257482 -49331806 - L2 LINE L2 -458 2856 2688 237 340 69 40 chr10 96257827 96258203 -49331085 - L2 LINE L2 -454 2860 2474 413 304 25 17 chr10 96258475 96258623 -49330665 + MIR SINE MIR 14 162 -46 427 306 61 14 chr10 96258755 96258902 -49330386 - MIR SINE MIR -87 175 22 511 258 31 8 chr10 96258971 96259099 -49330189 + MER91A DNA MER1_type 36 166 -30 287 224 16 32 chr10 96259521 96259646 -49329642 + GA-rich Low_complexity Low_complexity 3 125 0 26 50 0 0 chr10 96260547 96260587 -49328701 + AT_rich Low_complexity Low_complexity 1 40 0 305 296 116 32 chr10 96260600 96260789 -49328499 - MIR SINE MIR -29 233 29 285 279 15 0 chr10 96261463 96261531 -49327757 + MER5B DNA MER1_type 61 129 -49 212 111 22 0 chr10 96262499 96262544 -49326744 + T-rich Low_complexity Low_complexity 4 49 0 2226 100 13 13 chr10 96262982 96263292 -49325996 + AluY SINE Alu 2 311 0 194 293 65 73 chr10 96264472 96264595 -49324693 - MIR SINE MIR -11 251 130 21 0 0 0 chr10 96264608 96264629 -49324659 + AT_rich Low_complexity Low_complexity 1 21 0 1494 201 4 4 chr10 96264668 96264932 -49324356 - AluJo SINE Alu -48 264 1 226 290 80 50 chr10 96265122 96265222 -49324066 - MIR SINE MIR -29 233 131 1714 168 124 21 chr10 96265276 96265664 -49323624 - MSTA LTR MaLR 0 428 1 23 0 0 0 chr10 96266300 96266323 -49322965 + AT_rich Low_complexity Low_complexity 1 23 0 321 270 130 9 chr10 96266893 96267008 -49322280 - MIR SINE MIR -74 188 60 2571 267 37 35 chr10 96267012 96267734 -49321554 + L1PA15 LINE L1 1 724 -6063 * 10240 244 22 10 chr10 96267715 96271053 -49318235 + L1PA15 LINE L1 1281 4669 -2128 5460 78 0 14 chr10 96271045 96271787 -49317501 + L1PA8A LINE L1 5373 6104 -27 * 1828 136 0 0 chr10 96271788 96272045 -49317243 + AluSx SINE Alu 47 303 -9 6208 188 10 4 chr10 96272052 96274231 -49315057 + L1PA15 LINE L1 4644 6816 0 199 0 65 0 chr10 96274312 96274343 -49314945 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 718 188 8 0 chr10 96274815 96274932 -49314356 - FLAM_C SINE Alu -15 118 1 447 246 70 14 chr10 96275195 96275337 -49313951 - MLT1K LTR MaLR -280 308 159 697 233 13 7 chr10 96276216 96276366 -49312922 + MLT1E LTR MaLR 9 159 -434 1698 256 43 13 chr10 96276371 96276423 -49312865 + MLT1E LTR MaLR 119 168 -425 1817 121 0 0 chr10 96276423 96276672 -49312616 + AluSx SINE Alu 1 249 -63 1698 256 43 13 chr10 96276672 96277079 -49312209 + MLT1E LTR MaLR 168 592 -1 203 114 45 34 chr10 96277104 96277192 -49312096 + (TTATA)n Simple_repeat Simple_repeat 3 91 0 32 0 0 0 chr10 96277269 96277301 -49311987 + AT_rich Low_complexity Low_complexity 1 32 0 511 252 70 2 chr10 96277356 96277553 -49311735 - L1MEc LINE L1 -4959 1646 1305 475 327 121 9 chr10 96278138 96278361 -49310927 - MIR SINE MIR -14 248 1 1814 157 68 3 chr10 96278474 96278811 -49310477 - MER46B DNA MER2_type -1 235 2 21 0 0 0 chr10 96278834 96278855 -49310433 + AT_rich Low_complexity Low_complexity 1 21 0 238 250 0 0 chr10 96278890 96278942 -49310346 - L2 LINE L2 -252 3061 3010 1452 160 40 13 chr10 96279207 96279519 -49309769 - THE1C LTR MaLR -28 347 1 742 151 56 11 chr10 96279520 96279699 -49309589 + Charlie5 DNA MER1_type 2437 2623 0 28 61 0 0 chr10 96280139 96280188 -49309100 + AT_rich Low_complexity Low_complexity 1 49 0 24 0 0 0 chr10 96281762 96281786 -49307502 + AT_rich Low_complexity Low_complexity 1 24 0 204 225 42 35 chr10 96281896 96282038 -49307250 + (TATAA)n Simple_repeat Simple_repeat 5 147 0 657 283 75 17 chr10 96283564 96283804 -49305484 + MIR SINE MIR 9 262 0 580 320 105 5 chr10 96283995 96284195 -49305093 - MIR SINE MIR -10 252 33 702 24 0 0 chr10 96285126 96285210 -49304078 + (TCTA)n Simple_repeat Simple_repeat 4 87 0 345 169 42 0 chr10 96286563 96286634 -49302654 - MER53 DNA DNA -3 186 113 775 245 57 14 chr10 96286876 96287088 -49302200 - MIR SINE MIR -40 222 2 698 294 16 32 chr10 96287377 96287625 -49301663 + MIR SINE MIR 5 248 -14 270 116 0 0 chr10 96287752 96287795 -49301493 + (TC)n Simple_repeat Simple_repeat 1 43 0 398 209 104 43 chr10 96288305 96288420 -49300868 - L2 LINE L2 -3 3310 3189 301 307 139 35 chr10 96289104 96289306 -49299982 - MIR SINE MIR -9 253 31 231 208 21 0 chr10 96289380 96289428 -49299860 + GA-rich Low_complexity Low_complexity 1 49 0 341 329 79 7 chr10 96290770 96290910 -49298378 - MIR SINE MIR -1 261 112 303 244 139 26 chr10 96291184 96291299 -49297989 - MER20B DNA MER1_type -642 141 14 384 22 0 0 chr10 96291391 96291436 -49297852 + (CA)n Simple_repeat Simple_repeat 2 46 0 203 260 0 0 chr10 96292424 96292474 -49296814 + (TG)n Simple_repeat Simple_repeat 1 50 0 203 330 27 54 chr10 96292991 96293103 -49296185 - L2 LINE L2 -641 2673 2565 338 221 47 31 chr10 96294064 96294191 -49295097 - L1 LINE L1 -806 5340 5212 5624 160 26 11 chr10 96294508 96296091 -49293197 - L1MA4 LINE L1 -8 6292 4687 2373 134 4 26 chr10 96296089 96296545 -49292743 + L1MA4 LINE L1 4222 4667 -1479 * 413 318 21 48 chr10 96297297 96297486 -49291802 - MIR SINE MIR -54 208 25 24 0 0 0 chr10 96298568 96298592 -49290696 + AT_rich Low_complexity Low_complexity 1 24 0 26 0 0 0 chr10 96298651 96298677 -49290611 + AT_rich Low_complexity Low_complexity 1 26 0 303 202 76 50 chr10 96298677 96298796 -49290492 - L1ME4a LINE L1 -30 6091 5970 26 0 0 0 chr10 96299361 96299387 -49289901 + AT_rich Low_complexity Low_complexity 1 26 0 521 255 14 7 chr10 96299389 96299534 -49289754 - L1ME1 LINE L1 -9 6157 6012 398 252 35 17 chr10 96300026 96300141 -49289147 + L2 LINE L2 3196 3312 -1 389 356 101 19 chr10 96300397 96300714 -49288574 + L2 LINE L2 1817 2159 -1155 249 353 39 0 chr10 96302474 96302576 -49286712 - L2 LINE L2 -556 2758 2653 237 277 48 39 chr10 96302802 96303008 -49286280 + L1ME4a LINE L1 5830 6037 -84 286 249 11 2 chr10 96303025 96303132 -49286156 + L1ME3A LINE L1 5821 5926 -244 2074 102 3 40 chr10 96303838 96304141 -49285147 - AluSq SINE Alu -21 292 1 1289 216 79 23 chr10 96304236 96304579 -49284709 - L1MD1 LINE L1 -160 6082 5721 1448 77 50 9 chr10 96305399 96305621 -49283667 + L1MA3 LINE L1 6075 6305 0 22 0 0 0 chr10 96305931 96305953 -49283335 + AT_rich Low_complexity Low_complexity 1 22 0 257 330 0 27 chr10 96306209 96306321 -49282967 - HAL1b LINE L1 -862 486 378 275 212 24 24 chr10 96306965 96307050 -49282238 + (TATG)n Simple_repeat Simple_repeat 3 87 0 269 309 49 0 chr10 96307460 96307541 -49281747 + MIR3 SINE MIR 83 167 -41 1902 153 0 3 chr10 96307731 96308013 -49281275 + AluSx SINE Alu 16 296 -16 260 293 17 0 chr10 96308537 96308595 -49280693 - L2 LINE L2 -23 3290 3232 861 146 120 31 chr10 96310834 96311026 -49278262 - MER3 DNA MER1_type 0 209 1 330 263 111 41 chr10 96311227 96311398 -49277890 + MIR SINE MIR 66 248 -14 968 237 80 86 chr10 96312016 96312428 -49276860 + MER113 DNA MER1_type? 1 411 -110 2083 170 124 18 chr10 96312428 96312880 -49276408 + MLT1D LTR MaLR 4 503 -2 968 237 80 86 chr10 96312880 96312991 -49276297 + MER113 DNA MER1_type? 411 521 0 307 280 105 46 chr10 96313386 96313711 -49275577 - L1ME4a LINE L1 -67 6054 5711 1512 186 9 58 chr10 96314107 96314435 -49274853 + AluJb SINE Alu 1 312 0 540 296 104 5 chr10 96314930 96315155 -49274133 - MIR SINE MIR 0 262 19 623 36 0 24 chr10 96315207 96315291 -49273997 - L1PA5 LINE L1 -6 6148 6067 742 42 0 0 chr10 96315291 96315387 -49273901 + L1PA5 LINE L1 5875 5970 -184 203 222 0 0 chr10 96316129 96316174 -49273114 + MIR SINE MIR 92 136 -72 414 289 57 19 chr10 96317584 96317743 -49271545 - MER5A DNA MER1_type 0 189 25 1015 164 50 10 chr10 96318161 96318362 -49270926 - MER20 DNA MER1_type 0 219 11 180 274 16 32 chr10 96318372 96318434 -49270854 + MIR SINE MIR 90 150 -58 452 296 95 34 chr10 96318849 96319339 -49269949 + L1ME LINE L1 5296 5817 -304 266 282 10 0 chr10 96319396 96319499 -49269789 + (TA)n Simple_repeat Simple_repeat 1 104 0 38 0 0 0 chr10 96319616 96319654 -49269634 + AT_rich Low_complexity Low_complexity 1 38 0 227 284 0 54 chr10 96319654 96319728 -49269560 + MIR3 SINE MIR 139 208 0 1933 184 7 0 chr10 96319755 96320065 -49269223 + AluJb SINE Alu 1 312 0 352 259 224 11 chr10 96320149 96320323 -49268965 - MIR SINE MIR -13 249 39 500 284 111 0 chr10 96320497 96320659 -49268629 - MIR SINE MIR -19 243 64 2093 49 46 0 chr10 96321279 96321563 -49267725 - THE1B-int LTR MaLR -1283 297 1 1964 132 88 18 chr10 96321563 96321903 -49267385 - THE1B LTR MaLR 0 364 1 2379 87 7 0 chr10 96322967 96323266 -49266022 - AluSq SINE Alu -12 301 1 231 343 164 15 chr10 96323922 96324056 -49265232 + MIR3 SINE MIR 38 191 -17 6991 39 2 0 chr10 96324681 96325519 -49263769 + L1PA5 LINE L1 5304 6143 -11 295 221 49 107 chr10 96326522 96326644 -49262644 + MIR3 SINE MIR 2 123 -85 180 0 0 0 chr10 96326989 96327009 -49262279 + (T)n Simple_repeat Simple_repeat 1 20 0 332 352 37 6 chr10 96327123 96327285 -49262003 - MIR SINE MIR -91 171 5 1649 183 66 27 chr10 96328011 96328377 -49260911 + MER66A LTR ERV1 97 476 -2 348 393 131 17 chr10 96328450 96328809 -49260479 - L2 LINE L2 0 3272 2873 225 200 0 0 chr10 96328825 96328885 -49260403 - L1ME4a LINE L1 0 6121 6062 319 248 26 26 chr10 96328994 96329107 -49260181 - L1ME4a LINE L1 -216 5905 5793 1112 286 51 11 chr10 96329128 96329499 -49259789 - LTR16A LTR ERVL -5 445 60 808 215 62 0 chr10 96329875 96330052 -49259236 + MER5A DNA MER1_type 1 188 -1 2189 104 0 20 chr10 96330060 96330358 -49258930 - AluSc SINE Alu -17 292 1 674 317 8 42 chr10 96330465 96330724 -49258564 - MIR SINE MIR -5 257 8 191 231 77 0 chr10 96331202 96331254 -49258034 - MER5A DNA MER1_type -99 90 35 * 217 250 73 29 chr10 96331209 96331277 -49258011 + MER5A DNA MER1_type 119 189 0 811 204 68 11 chr10 96331285 96331461 -49257827 - MER5A DNA MER1_type 0 189 4 237 333 40 10 chr10 96331465 96331564 -49257724 - MIR3 SINE MIR -49 159 58 2249 99 0 0 chr10 96332280 96332624 -49256664 - AluSp SINE Alu 0 344 1 337 247 196 77 chr10 96332858 96333052 -49256236 - MIR SINE MIR -31 231 15 1076 292 71 20 chr10 96333164 96333572 -49255716 + L2 LINE L2 2881 3309 -4 361 270 87 32 chr10 96334572 96334698 -49254590 - MIR SINE MIR -35 227 95 2704 225 106 38 chr10 96334986 96335889 -49253399 - L1MC4 LINE L1 -2 8040 7055 183 80 0 0 chr10 96335889 96335914 -49253374 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 2704 225 106 38 chr10 96335914 96336051 -49253237 - L1MC4 LINE L1 -987 7055 6929 427 277 54 31 chr10 96336277 96336407 -49252881 - MIR SINE MIR -118 144 12 2158 107 31 50 chr10 96337037 96337419 -49251869 - THE1C LTR MaLR 0 375 1 1161 302 35 5 chr10 96339290 96339667 -49249621 - LTR16A LTR ERVL -7 443 56 470 319 54 6 chr10 96339749 96339915 -49249373 - MIR SINE MIR -61 201 28 253 381 35 30 chr10 96341626 96341823 -49247465 + MIR3 SINE MIR 10 207 -1 2063 125 10 22 chr10 96342247 96342558 -49246730 - AluSx SINE Alu -5 307 1 194 233 151 14 chr10 96342675 96342748 -49246540 - MIR3 SINE MIR -1 207 125 25 51 0 0 chr10 96343263 96343302 -49245986 + AT_rich Low_complexity Low_complexity 1 39 0 298 287 93 23 chr10 96343375 96343504 -49245784 - MIR SINE MIR -111 151 14 291 169 46 0 chr10 96345551 96345616 -49243672 + MER63 DNA MER1_type 659 726 -334 895 150 0 0 chr10 96345916 96346049 -49243239 - FLAM_A SINE Alu 0 133 1 2544 37 0 3 chr10 96346914 96347214 -49242074 + AluY SINE Alu 2 300 -11 533 191 0 0 chr10 96347978 96348062 -49241226 - FLAM_A SINE Alu -58 84 1 243 0 0 0 chr10 96348353 96348380 -49240908 + (TC)n Simple_repeat Simple_repeat 1 27 0 * 288 0 0 0 chr10 96348379 96348411 -49240877 + (CA)n Simple_repeat Simple_repeat 1 32 0 640 246 161 19 chr10 96348909 96349120 -49240168 - MIR SINE MIR -12 250 10 451 246 98 0 chr10 96349659 96349781 -49239507 + MER5A DNA MER1_type 5 138 -51 * 769 313 66 60 chr10 96349780 96350333 -49238955 + L2 LINE L2 2722 3271 -1 629 261 79 74 chr10 96352755 96353136 -49236152 - L1ME4a LINE L1 0 6121 5735 1808 169 0 38 chr10 96353136 96353456 -49235832 - AluJo SINE Alu -4 308 1 629 261 79 74 chr10 96353456 96353653 -49235635 - L1ME4a LINE L1 -386 5735 5540 182 105 26 0 chr10 96353782 96353820 -49235468 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 260 222 16 16 chr10 96354875 96354938 -49234350 + GA-rich Low_complexity Low_complexity 5 67 0 21 57 0 0 chr10 96355477 96355512 -49233776 + AT_rich Low_complexity Low_complexity 1 35 0 202 321 37 37 chr10 96355976 96356057 -49233231 - L2 LINE L2 -71 3201 3121 351 363 25 88 chr10 96356173 96356606 -49232682 + L2 LINE L2 2852 3257 -15 195 339 0 0 chr10 96356636 96356695 -49232593 + MIR SINE MIR 204 262 0 345 327 44 13 chr10 96357262 96357421 -49231867 + MIR3 SINE MIR 39 202 -6 508 249 45 69 chr10 96357923 96358020 -49231268 + MER102a DNA MER1_type 61 159 -1258 2063 105 46 26 chr10 96358020 96358326 -49230962 + AluSx SINE Alu 1 312 0 508 249 45 69 chr10 96358326 96358473 -49230815 + MER102a DNA MER1_type 159 299 -31 1795 122 36 24 chr10 96358730 96359104 -49230184 - Tigger3(Golem) DNA MER2_type -1 3028 2 181 351 14 0 chr10 96359402 96359476 -49229812 + L2 LINE L2 2545 2619 -695 460 233 34 123 chr10 96359586 96359732 -49229556 + L2 LINE L2 3138 3270 -2 502 276 79 0 chr10 96359790 96359942 -49229346 - MIR SINE MIR -75 187 24 700 280 65 16 chr10 96360469 96360724 -49228564 + MIR SINE MIR 3 262 0 2594 95 19 6 chr10 96361020 96361379 -49227909 + THE1B LTR MaLR 1 364 0 214 234 0 0 chr10 96362323 96362370 -49226918 + MER91 DNA MER1_type 78 124 -16 340 294 251 5 chr10 96362407 96362594 -49226694 + L2 LINE L2 2828 3060 -253 578 249 28 44 chr10 96363183 96363364 -49225924 + MER5B DNA MER1_type 1 178 0 365 297 103 0 chr10 96364755 96364900 -49224388 + MER63A DNA MER1_type 42 201 -9 765 226 100 12 chr10 96365050 96365357 -49223931 + MER93b LTR ERV1 61 373 0 529 292 137 13 chr10 96365550 96365776 -49223512 - MIR SINE MIR 0 262 9 241 235 49 37 chr10 96365872 96365953 -49223335 - L2 LINE L2 -4 3268 3187 687 274 93 30 chr10 96367433 96367763 -49221525 - L2 LINE L2 -266 3047 2697 1161 303 110 11 chr10 96368690 96369300 -49219988 + L2 LINE L2 2152 2821 -493 10239 145 31 29 chr10 96369310 96370622 -49218666 - Tigger4(Zombi) DNA MER2_type -830 1901 582 2229 129 0 0 chr10 96370622 96370925 -49218363 - AluSx SINE Alu -9 303 1 10239 145 31 29 chr10 96370925 96371506 -49217782 - Tigger4(Zombi) DNA MER2_type -2149 582 4 231 167 0 0 chr10 96371506 96371548 -49217740 + (TA)n Simple_repeat Simple_repeat 2 43 0 227 102 68 34 chr10 96371548 96371607 -49217681 - LTR66 LTR ERVL -171 439 379 213 176 0 59 chr10 96371607 96371658 -49217630 + L2 LINE L2 3266 3313 0 356 315 97 24 chr10 96371968 96372133 -49217155 - MIR3 SINE MIR -2 206 30 333 100 0 0 chr10 96372355 96372405 -49216883 + (TG)n Simple_repeat Simple_repeat 1 50 0 717 236 66 11 chr10 96372900 96373082 -49216206 + MIR SINE MIR 71 262 0 224 262 243 10 chr10 96373696 96373799 -49215489 + MER5A DNA MER1_type 63 189 0 331 325 11 48 chr10 96373817 96374005 -49215283 + MER5A DNA MER1_type 7 187 -2 3089 151 15 2 chr10 96375856 96376374 -49212914 + LTR45 LTR ERV1 1 525 0 346 153 265 0 chr10 96377167 96377265 -49212023 + MER53 DNA DNA 8 131 -58 858 177 34 6 chr10 96377303 96377478 -49211810 + MER20 DNA MER1_type 39 218 -1 4155 137 13 27 chr10 96378053 96378638 -49210650 - MER50 LTR ERV1 -27 707 115 306 0 0 0 chr10 96378638 96378672 -49210616 + (TA)n Simple_repeat Simple_repeat 1 34 0 2113 115 28 0 chr10 96378673 96378960 -49210328 - AluSx SINE Alu -17 295 1 4155 137 13 27 chr10 96378960 96379087 -49210201 - MER50 LTR ERV1 -618 116 3 655 326 29 16 chr10 96379096 96379338 -49209950 - L2 LINE L2 -564 2750 2506 1987 196 9 48 chr10 96379450 96379910 -49209378 + LTR47B LTR ERVL 1 442 -1 757 243 187 11 chr10 96380057 96380415 -49208873 + LTR50 LTR ERVL 344 764 -31 433 317 65 50 chr10 96380443 96380765 -49208523 - L2 LINE L2 -773 2541 2215 1012 236 33 22 chr10 96381129 96381400 -49207888 - MER93b LTR ERV1 -2 371 98 214 283 39 122 chr10 96383140 96383163 -49206125 - MER5A DNA MER1_type -18 171 148 2116 120 3 3 chr10 96383163 96383464 -49205824 + AluSg SINE Alu 1 301 -9 214 283 39 122 chr10 96383464 96383620 -49205668 - MER5A DNA MER1_type -41 148 7 259 258 15 15 chr10 96384043 96384109 -49205179 + MER106A DNA MER1_type 1 66 -170 327 216 74 39 chr10 96384151 96384350 -49204938 - MER34C LTR ERV1 0 542 353 304 224 0 0 chr10 96384675 96384749 -49204539 - MER34C LTR ERV1 -468 101 1 466 184 32 16 chr10 96384749 96384874 -49204414 + MER106A DNA MER1_type 110 236 0 972 252 18 18 chr10 96385021 96385247 -49204041 - MIR SINE MIR -32 230 5 205 392 10 0 chr10 96385442 96385544 -49203744 - MIR SINE MIR 0 262 160 472 325 10 36 chr10 96385591 96385785 -49203503 - MIR SINE MIR 0 262 74 304 292 18 88 chr10 96386760 96386856 -49202432 + MIR SINE MIR 60 140 -122 755 214 0 0 chr10 96386856 96386982 -49202306 + FLAM_A SINE Alu 1 126 -7 304 292 18 88 chr10 96386982 96387056 -49202232 + MIR SINE MIR 140 218 -44 654 256 23 17 chr10 96387137 96387309 -49201979 + MLT1H LTR MaLR 121 293 -256 192 253 211 0 chr10 96387472 96387567 -49201721 + L3 LINE CR1 1454 1568 -9 206 245 0 0 chr10 96387923 96387972 -49201316 - L2 LINE L2 0 3313 3265 1483 269 60 15 chr10 96387998 96388593 -49200695 + L1ME3A LINE L1 5536 6157 -13 315 0 0 0 chr10 96388600 96388635 -49200653 + (CA)n Simple_repeat Simple_repeat 2 36 0 1593 228 66 23 chr10 96389525 96389963 -49199325 - LTR40b LTR ERVL -3 459 3 385 281 185 17 chr10 96390008 96390186 -49199102 + LTR67 LTR ERVL 350 557 0 279 244 47 35 chr10 96390923 96391009 -49198279 - MIR3 SINE MIR -7 201 115 2874 77 51 19 chr10 96391354 96391395 -49197893 - MLT2A1 LTR ERVL 0 444 406 270 0 0 0 chr10 96391395 96391425 -49197863 + (CA)n Simple_repeat Simple_repeat 2 31 0 2874 77 51 19 chr10 96391425 96391813 -49197475 - MLT2A1 LTR ERVL -38 406 1 540 303 43 11 chr10 96392218 96392403 -49196885 - MIR SINE MIR -16 246 56 333 295 93 51 chr10 96392495 96392732 -49196556 + L1ME4a LINE L1 5838 6084 -37 26 50 0 0 chr10 96393283 96393323 -49195965 + AT_rich Low_complexity Low_complexity 1 40 0 419 301 115 11 chr10 96393902 96394085 -49195203 - MIR SINE MIR -48 214 13 6578 72 12 10 chr10 96394285 96395452 -49193836 - L1PA7 LINE L1 0 6154 4989 298 339 28 9 chr10 96395532 96395641 -49193647 + MIR3 SINE MIR 91 201 -7 21 0 0 0 chr10 96395807 96395828 -49193460 + AT_rich Low_complexity Low_complexity 1 21 0 1374 225 60 9 chr10 96396017 96396351 -49192937 + MLT1A2 LTR MaLR 24 374 0 193 280 187 53 chr10 96397033 96397183 -49192105 - MIR SINE MIR -26 236 67 1404 206 92 48 chr10 96397456 96397957 -49191331 - Charlie1b DNA MER1_type 0 523 1 1492 174 87 14 chr10 96398876 96399164 -49190124 - AluJb SINE Alu -1 311 3 229 253 105 0 chr10 96399353 96399448 -49189840 - L1ME LINE L1 -201 5920 5816 269 289 80 40 chr10 96399462 96399663 -49189625 - L1ME LINE L1 -416 5705 5497 487 258 76 61 chr10 96402273 96402537 -49186751 - Charlie8 DNA MER1_type -997 1420 55 271 299 58 11 chr10 96402610 96402697 -49186591 - MIR SINE MIR -78 130 40 280 301 0 14 chr10 96402888 96402961 -49186327 + MIR SINE MIR 50 121 -141 207 0 0 0 chr10 96402970 96402993 -49186295 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 227 241 0 17 chr10 96403544 96403602 -49185686 + G-rich Low_complexity Low_complexity 1 57 0 193 296 0 0 chr10 96406177 96406221 -49183067 + L2 LINE L2 3268 3311 -2 2806 43 9 0 chr10 96406237 96406583 -49182705 - L1PA5 LINE L1 -2 6152 5804 197 0 0 122 chr10 96406702 96406751 -49182537 + (CAAAA)n Simple_repeat Simple_repeat 4 46 0 296 269 13 0 chr10 96408006 96408084 -49181204 - MER117 DNA MER1_type -40 157 79 243 254 17 0 chr10 96408107 96408166 -49181122 - MIR SINE MIR -2 260 201 675 249 37 16 chr10 96408216 96408405 -49180883 + MIR SINE MIR 70 262 0 422 336 87 34 chr10 96408363 96408571 -49180717 - MIR SINE MIR -34 228 10 * 214 194 75 90 chr10 96408587 96408654 -49180634 - L2 LINE L2 -48 3265 3200 21 0 0 0 chr10 96410689 96410710 -49178578 + AT_rich Low_complexity Low_complexity 1 21 0 273 211 8 149 chr10 96410849 96410918 -49178370 - MER5A DNA MER1_type -62 120 86 1680 170 36 14 chr10 96410918 96411195 -49178093 - AluJb SINE Alu -25 287 5 273 211 8 149 chr10 96411195 96411266 -49178022 - MER5A DNA MER1_type -96 86 7 347 314 57 14 chr10 96412059 96412199 -49177089 - MIR SINE MIR -98 164 19 246 283 75 46 chr10 96412212 96412452 -49176836 - L1ME4a LINE L1 -3 6118 5872 1416 229 55 8 chr10 96413004 96413384 -49175904 - L1MC4a LINE L1 -1 7807 7410 514 329 29 67 chr10 96413551 96414029 -49175259 - L2 LINE L2 -461 2853 2394 903 201 137 33 chr10 96414737 96415066 -49174222 + L1MC4 LINE L1 7120 7482 -560 260 270 230 10 chr10 96415595 96415695 -49173593 - MER5A DNA MER1_type 0 189 68 198 186 20 167 chr10 96415661 96415702 -49173586 + MER5A DNA MER1_type 102 121 -68 * 390 74 0 0 chr10 96415702 96415756 -49173532 + (TG)n Simple_repeat Simple_repeat 1 54 0 198 186 20 167 chr10 96415756 96415816 -49173472 + MER5A DNA MER1_type 121 188 -1 2263 106 3 0 chr10 96416837 96417130 -49172158 + AluSq SINE Alu 1 294 -19 292 291 179 22 chr10 96417305 96417439 -49171849 + MIR SINE MIR 3 157 -105 21 82 0 0 chr10 96418206 96418255 -49171033 + AT_rich Low_complexity Low_complexity 1 49 0 651 284 83 16 chr10 96418386 96418699 -49170589 - MLT1L LTR MaLR -79 536 203 307 320 76 35 chr10 96418985 96419157 -49170131 - MIR SINE MIR -64 198 20 303 122 0 0 chr10 96420204 96420253 -49169035 + (CA)n Simple_repeat Simple_repeat 1 49 0 219 324 76 29 chr10 96421057 96421162 -49168126 - MIR SINE MIR -127 135 26 647 145 46 8 chr10 96421479 96421610 -49167678 - Charlie1 DNA MER1_type -2 2759 2624 697 208 71 0 chr10 96421637 96421791 -49167497 - Charlie1 DNA MER1_type -2596 165 1 475 349 128 12 chr10 96422213 96422540 -49166748 + LTR67 LTR ERVL 101 465 -92 254 330 60 43 chr10 96422622 96422807 -49166481 + MER5A DNA MER1_type 1 188 -1 2188 116 0 0 chr10 96422895 96423187 -49166101 - AluSx SINE Alu -20 292 1 223 243 200 0 chr10 96423611 96423681 -49165607 - MIR3 SINE MIR -6 202 119 321 259 0 12 chr10 96423821 96423902 -49165386 + MIR SINE MIR 82 161 -101 * 702 281 65 41 chr10 96423891 96424071 -49165217 - MIR SINE MIR 0 262 73 1168 282 85 37 chr10 96424071 96424635 -49164653 - MLT1E LTR MaLR -2 591 1 702 281 65 41 chr10 96424635 96424700 -49164588 - MIR SINE MIR -189 73 11 2276 90 3 3 chr10 96425947 96426246 -49163042 - AluY SINE Alu -12 299 1 21 36 0 0 chr10 96426451 96426479 -49162809 + AT_rich Low_complexity Low_complexity 1 28 0 651 236 39 34 chr10 96427622 96427800 -49161488 - MER5A DNA MER1_type -3 186 8 717 246 64 15 chr10 96427815 96428018 -49161270 + MER58A DNA MER1_type 1 213 -11 1229 161 71 33 chr10 96429869 96429994 -49159294 - L1MA8 LINE L1 0 6300 6181 1891 144 18 0 chr10 96429994 96430278 -49159010 - AluJb SINE Alu -23 289 1 1229 161 71 33 chr10 96430278 96430542 -49158746 - L1MA8 LINE L1 -119 6181 5863 352 298 32 8 chr10 96430985 96431109 -49158179 + MIR3 SINE MIR 77 203 -5 202 276 29 95 chr10 96431146 96431251 -49158037 + MIR SINE MIR 106 203 -59 498 250 9 9 chr10 96431346 96431458 -49157830 - L2 LINE L2 0 3313 3202 2185 103 4 0 chr10 96432974 96433278 -49156010 - AluSx SINE Alu 0 305 1 438 285 8 39 chr10 96433581 96433711 -49155577 + MIR3 SINE MIR 37 162 -46 238 350 21 50 chr10 96433714 96433854 -49155434 - MER5A DNA MER1_type -6 183 48 490 196 0 11 chr10 96435497 96435589 -49153699 + MER5A DNA MER1_type 16 106 -83 298 367 67 22 chr10 96435675 96435855 -49153433 - MER5A DNA MER1_type 0 189 2 1019 162 44 20 chr10 96435930 96436134 -49153154 + MER3 DNA MER1_type 1 209 0 27 29 0 0 chr10 96437704 96437738 -49151550 + AT_rich Low_complexity Low_complexity 1 34 0 192 40 0 0 chr10 96438047 96438072 -49151216 + (TA)n Simple_repeat Simple_repeat 1 25 0 573 308 51 71 chr10 96438949 96439358 -49149930 - L2 LINE L2 -1 3271 2871 2379 87 7 0 chr10 96440776 96441075 -49148213 - AluSq SINE Alu -12 301 1 223 410 0 0 chr10 96441731 96441809 -49147479 + MIR SINE MIR 38 115 -93 7005 39 2 0 chr10 96442490 96443328 -49145960 + L1PA5 LINE L1 5304 6143 -11 295 221 49 107 chr10 96444331 96444453 -49144835 + MIR3 SINE MIR 2 123 -85 189 0 0 0 chr10 96444798 96444819 -49144469 + (T)n Simple_repeat Simple_repeat 1 21 0 343 346 37 6 chr10 96444933 96445095 -49144193 - MIR SINE MIR -91 171 5 1649 183 66 27 chr10 96445822 96446188 -49143100 + MER66A LTR ERV1 97 476 -2 332 391 134 17 chr10 96446269 96446619 -49142669 - L2 LINE L2 -9 3263 2873 225 200 0 0 chr10 96446635 96446695 -49142593 - L1ME4a LINE L1 0 6121 6062 317 248 26 26 chr10 96446804 96446917 -49142371 - L1ME4a LINE L1 -216 5905 5793 1087 280 57 16 chr10 96446938 96447309 -49141979 - LTR16A LTR ERVL -5 445 60 808 215 62 0 chr10 96447685 96447862 -49141426 + MER5A DNA MER1_type 1 188 -1 2219 101 0 20 chr10 96447870 96448168 -49141120 - AluSc SINE Alu -17 292 1 660 320 8 42 chr10 96448275 96448534 -49140754 - MIR SINE MIR -5 257 8 191 231 77 0 chr10 96449012 96449064 -49140224 - MER5A DNA MER1_type -99 90 35 * 217 250 73 29 chr10 96449019 96449087 -49140201 + MER5A DNA MER1_type 119 189 0 811 204 68 11 chr10 96449095 96449271 -49140017 - MER5A DNA MER1_type 0 189 4 237 333 40 10 chr10 96449275 96449374 -49139914 - MIR3 SINE MIR -49 159 58 2249 99 0 0 chr10 96450091 96450420 -49138868 - AluSp SINE Alu 0 329 1 337 247 196 77 chr10 96450654 96450848 -49138440 - MIR SINE MIR -31 231 15 1100 289 71 20 chr10 96450961 96451369 -49137919 + L2 LINE L2 2881 3309 -4 361 270 87 32 chr10 96452370 96452496 -49136792 - MIR SINE MIR -35 227 95 2759 222 106 38 chr10 96452784 96453687 -49135601 - L1MC4 LINE L1 -2 8040 7055 183 80 0 0 chr10 96453687 96453712 -49135576 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 2759 222 106 38 chr10 96453712 96453849 -49135439 - L1MC4 LINE L1 -987 7055 6929 427 277 54 31 chr10 96454075 96454205 -49135083 - MIR SINE MIR -118 144 12 2158 107 31 50 chr10 96454835 96455217 -49134071 - THE1C LTR MaLR 0 375 1 1161 302 35 5 chr10 96457088 96457465 -49131823 - LTR16A LTR ERVL -7 443 56 470 319 54 6 chr10 96457547 96457713 -49131575 - MIR SINE MIR -61 201 28 253 381 35 30 chr10 96459424 96459621 -49129667 + MIR3 SINE MIR 10 207 -1 2063 125 10 22 chr10 96460045 96460356 -49128932 - AluSx SINE Alu -5 307 1 194 233 151 14 chr10 96460473 96460546 -49128742 - MIR3 SINE MIR -1 207 125 298 287 93 23 chr10 96461173 96461302 -49127986 - MIR SINE MIR -111 151 14 291 169 46 0 chr10 96463350 96463415 -49125873 + MER63 DNA MER1_type 659 726 -334 773 188 0 0 chr10 96463711 96463870 -49125418 - FLAM_A SINE Alu 0 159 1 1263 135 34 24 chr10 96464351 96464558 -49124730 - AluSx SINE Alu -66 246 38 2366 76 0 10 chr10 96464567 96464868 -49124420 - AluY SINE Alu -13 298 1 872 122 50 22 chr10 96466161 96466341 -49122947 + L1MA5A LINE L1 5990 6174 -123 2131 86 13 50 chr10 96466341 96466644 -49122644 + AluSx SINE Alu 1 292 -20 993 153 0 0 chr10 96466859 96467009 -49122279 - AluJo SINE Alu -162 150 1 366 304 39 1 chr10 96469264 96469421 -49119867 + MIR SINE MIR 38 198 -62 1420 198 20 94 chr10 96469570 96469964 -49119324 - MLT1A1 LTR MaLR 0 365 1 375 23 0 0 chr10 96470115 96470159 -49119129 + (CA)n Simple_repeat Simple_repeat 1 44 0 187 274 85 85 chr10 96470208 96470372 -49118916 + MIR SINE MIR 57 220 -42 581 261 34 23 chr10 96470965 96471141 -49118147 + MIR SINE MIR 37 214 -48 1728 168 0 48 chr10 96471675 96471984 -49117304 - AluJb SINE Alu -18 294 1 638 250 100 23 chr10 96472103 96472323 -49116965 - MIR SINE MIR -3 259 23 580 278 18 12 chr10 96472685 96472854 -49116434 + MIR SINE MIR 45 214 -48 548 281 130 26 chr10 96473588 96473819 -49115469 + MIR SINE MIR 5 259 -3 182 282 37 92 chr10 96473857 96474020 -49115268 - L3 LINE CR1 -221 1356 1203 2471 106 74 3 chr10 96476410 96476760 -49112528 + THE1C LTR MaLR 1 375 0 270 0 0 0 chr10 96477458 96477488 -49111800 + (T)n Simple_repeat Simple_repeat 1 30 0 1252 174 0 0 chr10 96477763 96477964 -49111324 - AluJo SINE Alu -18 294 94 2515 123 26 11 chr10 96478154 96478535 -49110753 + MLT1B LTR MaLR 1 387 -3 1121 240 47 42 chr10 96479285 96479644 -49109644 - MLT1A2 LTR MaLR -12 362 2 32 43 0 0 chr10 96479974 96480020 -49109268 + AT_rich Low_complexity Low_complexity 1 46 0 199 425 0 9 chr10 96480672 96480785 -49108503 + MIR3 SINE MIR 88 199 -9 2656 203 52 93 chr10 96480818 96480980 -49108308 - L1MB7 LINE L1 0 6184 6017 2385 115 48 25 chr10 96480980 96481336 -49107952 - THE1B LTR MaLR 0 364 1 2656 203 52 93 chr10 96481336 96481965 -49107323 - L1MB7 LINE L1 -167 6017 5426 1673 138 4 4 chr10 96483866 96484143 -49105145 - AluSq SINE Alu 0 315 39 366 333 60 27 chr10 96484898 96485081 -49104207 - MER5A DNA MER1_type 0 189 1 200 275 93 78 chr10 96485131 96485204 -49104084 + MIR SINE MIR 67 137 -125 863 125 0 17 chr10 96485204 96485324 -49103964 + FLAM_C SINE Alu 1 118 -15 200 275 93 78 chr10 96485324 96485443 -49103845 + MIR SINE MIR 137 262 0 209 281 90 22 chr10 96485803 96485892 -49103396 + MIR SINE MIR 119 213 -49 231 114 0 0 chr10 96486110 96486145 -49103143 + (TATATG)n Simple_repeat Simple_repeat 2 36 0 201 170 0 64 chr10 96486205 96486252 -49103036 + (TATG)n Simple_repeat Simple_repeat 1 44 0 695 255 0 72 chr10 96486289 96486442 -49102846 + FRAM SINE Alu 5 146 -30 198 0 0 0 chr10 96486446 96486468 -49102820 + (CA)n Simple_repeat Simple_repeat 2 23 0 275 281 0 0 chr10 96486468 96486550 -49102738 + L1MC4 LINE L1 6614 6695 -1347 252 253 11 42 chr10 96486474 96486569 -49102719 - L1MC4 LINE L1 -1339 6703 6612 * 822 257 9 14 chr10 96487896 96488106 -49101182 - MIR SINE MIR -7 255 47 345 100 0 0 chr10 96488137 96488196 -49101092 - L1MD3 LINE L1 -1 7990 7726 2466 135 28 38 chr10 96488202 96488624 -49100664 + MSTB LTR MaLR 4 421 -5 639 254 113 21 chr10 96490709 96490949 -49098339 - MIR SINE MIR 0 262 1 205 294 0 44 chr10 96491709 96491777 -49097511 + L2 LINE L2 3206 3270 -2 739 225 117 42 chr10 96492536 96492776 -49096512 - MIR SINE MIR -2 260 4 181 235 59 39 chr10 96494057 96494108 -49095180 + MIR3 SINE MIR 143 194 -14 636 262 78 5 chr10 96494771 96494962 -49094326 + MIR SINE MIR 33 237 -25 612 281 11 34 chr10 96495150 96495328 -49093960 - MIR SINE MIR -70 192 19 331 290 0 0 chr10 96495876 96495969 -49093319 - MIR SINE MIR -122 140 48 687 249 31 21 chr10 96495979 96496172 -49093116 + MIR SINE MIR 2 196 -66 24 0 0 0 chr10 96497489 96497513 -49091775 + AT_rich Low_complexity Low_complexity 1 24 0 1479 147 70 70 chr10 96497930 96498229 -49091059 - AluJo SINE Alu -12 300 2 1722 161 34 3 chr10 96498233 96498524 -49090764 - AluJo SINE Alu -11 301 2 3143 23 8 0 chr10 96498579 96498931 -49090357 - L1PA4 LINE L1 -3 6152 5798 411 235 128 0 chr10 96499484 96499586 -49089702 + L2 LINE L2 3158 3272 0 238 65 22 43 chr10 96500346 96500392 -49088896 + (ATG)n Simple_repeat Simple_repeat 3 47 0 304 272 58 5 chr10 96501585 96501776 -49087512 + L1ME4a LINE L1 5919 6119 -2 382 259 101 22 chr10 96501861 96502000 -49087288 - MIR3 SINE MIR -17 191 42 250 243 18 5 chr10 96502388 96502456 -49086832 - MIR SINE MIR -71 137 90 745 276 63 29 chr10 96502497 96502736 -49086552 + MIR SINE MIR 10 256 -6 180 111 0 0 chr10 96503333 96503360 -49085928 + (A)n Simple_repeat Simple_repeat 1 27 0 2178 146 39 16 chr10 96505455 96505818 -49083470 + THE1C LTR MaLR 1 371 -4 222 171 0 0 chr10 96506850 96506891 -49082397 + A-rich Low_complexity Low_complexity 1 41 0 469 276 32 19 chr10 96507721 96507877 -49081411 + MIR SINE MIR 105 262 0 2090 184 96 38 chr10 96507982 96508459 -49080829 - MLT1D LTR MaLR 0 505 1 1167 211 135 28 chr10 96508592 96508919 -49080369 - MLT1A1 LTR MaLR -3 362 1 320 281 7 103 chr10 96509338 96509601 -49079687 + L2 LINE L2 2825 3051 -221 2137 101 0 0 chr10 96509607 96509883 -49079405 - AluSg SINE Alu -18 292 17 781 216 61 28 chr10 96510172 96510385 -49078903 - MIR SINE MIR -34 228 9 263 191 104 165 chr10 96510642 96510757 -49078531 + MER81 DNA DNA 2 109 -5 1126 134 82 5 chr10 96510874 96511068 -49078220 + MER3 DNA MER1_type 1 209 0 268 267 267 30 chr10 96511078 96511213 -49078075 - MER5B DNA MER1_type -7 171 5 195 293 32 98 chr10 96511225 96511348 -49077940 + MER5A DNA MER1_type 1 115 -74 2884 178 65 5 chr10 96511364 96511920 -49077368 - L1MC3 LINE L1 0 7785 7197 335 267 11 11 chr10 96511928 96512018 -49077270 - MLT1F1 LTR MaLR -442 125 36 509 340 89 41 chr10 96512839 96513233 -49076055 + L3 LINE CR1 1146 1558 -19 360 329 22 7 chr10 96513463 96513600 -49075688 + MIR3 SINE MIR 58 196 -12 600 290 138 21 chr10 96513857 96514147 -49075141 - MER102a DNA MER1_type -6 324 1 2016 107 32 121 chr10 96514554 96514746 -49074542 - THE1C LTR MaLR 0 375 238 585 0 0 0 chr10 96514746 96514811 -49074477 + (TA)n Simple_repeat Simple_repeat 2 66 0 2016 107 32 121 chr10 96514811 96515030 -49074258 - THE1C LTR MaLR -137 238 1 603 296 5 5 chr10 96515437 96515636 -49073652 - MARNA DNA Mariner -195 391 193 276 215 11 32 chr10 96515832 96515925 -49073363 + T-rich Low_complexity Low_complexity 5 95 0 233 140 18 0 chr10 96515927 96515984 -49073304 + (TTTAG)n Simple_repeat Simple_repeat 3 60 0 2547 201 29 47 chr10 96516003 96516561 -49072727 - MER34B LTR ERV1 -5 560 13 368 62 0 0 chr10 96517860 96517908 -49071380 - MADE1 DNA Mariner 0 80 33 192 265 176 0 chr10 96517913 96517981 -49071307 - MER5A DNA MER1_type -55 134 55 353 277 56 56 chr10 96518133 96518328 -49070960 + MIR3 SINE MIR 5 199 -9 252 242 152 68 chr10 96518431 96518563 -49070725 + MIR SINE MIR 21 163 -99 514 299 75 11 chr10 96519131 96519305 -49069983 + MIR SINE MIR 16 200 -62 431 313 124 28 chr10 96521479 96521728 -49067560 + L2 LINE L2 3038 3310 -3 249 33 0 0 chr10 96521763 96521793 -49067495 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 1879 40 0 0 chr10 96522483 96522708 -49066580 + L1PA5 LINE L1 5923 6147 -7 216 0 0 0 chr10 96522708 96522732 -49066556 + (TG)n Simple_repeat Simple_repeat 2 25 0 2284 105 0 0 chr10 96523745 96524039 -49065249 - AluSc SINE Alu -15 294 1 302 300 28 8 chr10 96524253 96524506 -49064782 - L1MEc LINE L1 -4122 2274 2017 2176 116 0 0 chr10 96525640 96525932 -49063356 - AluSx SINE Alu -20 292 1 767 183 0 15 chr10 96526350 96526481 -49062807 - FLAM_C SINE Alu -3 130 2 260 232 134 0 chr10 96526743 96526825 -49062463 + MIR SINE MIR 62 154 -108 496 241 15 38 chr10 96527437 96527570 -49061718 + L2 LINE L2 3183 3312 -1 1745 58 31 0 chr10 96527932 96528155 -49061133 + MER30 DNA MER1_type 1 230 0 3248 18 0 0 chr10 96528921 96529318 -49059970 - L1PA2 LINE L1 -920 5226 4830 7022 12 0 0 chr10 96529318 96530174 -49059114 + L1PA2 LINE L1 5231 6086 -69 1703 116 7 11 chr10 96530276 96530552 -49058736 + L1MA3 LINE L1 6021 6295 -10 324 224 112 0 chr10 96530697 96530795 -49058493 + MIR SINE MIR 101 209 -53 215 328 112 35 chr10 96531016 96531132 -49058156 + MER5A DNA MER1_type 49 173 -16 771 204 73 61 chr10 96531669 96532007 -49057281 + MER39 LTR ERV1 5 559 -148 878 174 0 0 chr10 96532007 96532151 -49057137 - FRAM SINE Alu -12 164 21 566 156 149 7 chr10 96532151 96532292 -49056996 + MER34 LTR ERV1 380 540 -2 231 36 0 0 chr10 96532876 96532904 -49056384 + (CA)n Simple_repeat Simple_repeat 2 29 0 259 213 66 16 chr10 96533188 96533249 -49056039 + MIR SINE MIR 84 147 -61 242 263 0 0 chr10 96533356 96533432 -49055856 - L1MC4 LINE L1 -1339 6703 6628 319 236 6 50 chr10 96533604 96533765 -49055523 + (TA)n Simple_repeat Simple_repeat 2 155 0 742 82 0 0 chr10 96533826 96533924 -49055364 + AluSp/q SINE Alu 203 300 -13 1514 186 24 3 chr10 96534500 96534791 -49054497 + L1MB5 LINE L1 5876 6172 -2 657 290 146 50 chr10 96535259 96535738 -49053550 + L2 LINE L2 2777 3307 -6 317 315 55 44 chr10 96536603 96536784 -49052504 + MER5A DNA MER1_type 7 189 0 410 296 70 28 chr10 96536865 96537007 -49052281 - MIR SINE MIR -114 148 1 30 0 0 0 chr10 96537474 96537504 -49051784 + AT_rich Low_complexity Low_complexity 1 30 0 347 175 16 0 chr10 96538230 96538293 -49050995 + L2 LINE L2 3249 3312 -1 271 271 14 14 chr10 96538573 96538643 -49050645 + MIR SINE MIR 82 151 -111 529 262 0 0 chr10 96538677 96538818 -49050470 - L1M4 LINE L1 -2092 4054 3914 193 80 0 0 chr10 96538835 96538860 -49050428 + L2 LINE L2 3269 3293 -20 2750 102 0 0 chr10 96539429 96539793 -49049495 - THE1B LTR MaLR 0 364 1 331 308 209 30 chr10 96539811 96539990 -49049298 + L1ME4a LINE L1 5812 5958 -163 2228 106 7 0 chr10 96539990 96540282 -49049006 - AluSx SINE Alu -18 294 1 331 308 209 30 chr10 96540282 96540365 -49048923 + L1ME4a LINE L1 5958 6121 0 277 203 178 25 chr10 96540607 96540725 -49048563 - MIR SINE MIR 0 262 127 278 333 58 22 chr10 96540737 96540875 -49048413 - L2 LINE L2 -206 3066 2924 801 292 29 12 chr10 96541526 96541766 -49047522 - MIR SINE MIR -16 246 3 227 222 0 0 chr10 96542290 96542335 -49046953 - L2 LINE L2 -4 3309 3265 798 296 48 38 chr10 96542942 96543341 -49045947 + LTR16C LTR ERVL 89 491 0 447 298 28 22 chr10 96544051 96544232 -49045056 + MER63A DNA MER1_type 27 208 -2 225 265 0 15 chr10 96544232 96544295 -49044993 + MLT1L LTR MaLR 510 571 -44 2466 118 20 46 chr10 96545077 96545124 -49044164 - MSTA LTR MaLR 0 428 381 2161 126 0 3 chr10 96545124 96545426 -49043862 - AluSg SINE Alu -9 301 1 2466 118 20 46 chr10 96545426 96545615 -49043673 - MSTA LTR MaLR -47 381 206 2169 117 0 7 chr10 96545615 96545915 -49043373 - AluSx SINE Alu -14 298 1 2466 118 20 46 chr10 96545915 96546116 -49043172 - MSTA LTR MaLR -222 206 1 1312 201 103 20 chr10 96546549 96547052 -49042236 - MER61E LTR ERV1 0 794 249 418 188 0 12 chr10 96547114 96547199 -49042089 - MER61E LTR ERV1 -484 85 2 4657 134 30 52 chr10 96548012 96549399 -49039889 + pTR5 LTR ERV1 743 2606 0 180 245 0 0 chr10 96549506 96549559 -49039729 + A-rich Low_complexity Low_complexity 1 53 0 291 280 59 57 chr10 96549753 96550203 -49039085 + L1MEd LINE L1 1073 1615 -875 404 261 31 0 chr10 96550774 96550904 -49038384 + L1MEc LINE L1 142 275 -6121 299 179 0 0 chr10 96550922 96550989 -49038299 + Charlie5 DNA MER1_type 2464 2530 -82 326 356 36 52 chr10 96553153 96553347 -49035941 + MIR3 SINE MIR 7 197 -11 25 0 0 0 chr10 96554097 96554122 -49035166 + AT_rich Low_complexity Low_complexity 1 25 0 1777 167 22 22 chr10 96554675 96554987 -49034301 + AluJo SINE Alu 1 312 0 238 284 103 17 chr10 96557130 96557246 -49032042 + MIR SINE MIR 18 143 -65 250 297 31 0 chr10 96558022 96558086 -49031202 - MIR SINE MIR -118 90 25 516 219 0 0 chr10 96558525 96558621 -49030667 + MER5A DNA MER1_type 9 104 -85 497 295 8 8 chr10 96558622 96558744 -49030544 - MER5B DNA MER1_type -56 122 1 350 372 62 4 chr10 96560325 96560551 -49028737 - L2 LINE L2 0 3313 3075 1950 138 0 3 chr10 96561214 96561524 -49027764 + AluSx SINE Alu 1 309 0 189 244 35 0 chr10 96561574 96561660 -49027628 + (TA)n Simple_repeat Simple_repeat 2 90 0 26 50 0 0 chr10 96561779 96561819 -49027469 + AT_rich Low_complexity Low_complexity 1 40 0 243 0 0 0 chr10 96561900 96561950 -49027338 + (TCCC)n Simple_repeat Simple_repeat 1 77 0 243 0 0 0 chr10 96561950 96561977 -49027311 + (TCCC)n Simple_repeat Simple_repeat 4 30 0 1356 36 0 0 chr10 96562623 96562788 -49026500 + L1PA3 LINE L1 5991 6155 0 575 291 57 24 chr10 96564352 96564562 -49024726 + MIR SINE MIR 35 251 -11 208 313 31 21 chr10 96564832 96564928 -49024360 - MIR SINE MIR -92 116 20 1869 122 7 25 chr10 96566057 96566388 -49022900 - AluSx SINE Alu 0 326 1 2326 71 3 3 chr10 96567955 96568279 -49021009 - AluSc SINE Alu 0 324 1 334 279 54 0 chr10 96568379 96568490 -49020798 - MIR3 SINE MIR -14 194 78 826 155 0 72 chr10 96568507 96568701 -49020587 + MLT1B LTR MaLR 1 180 -210 180 135 0 0 chr10 96568778 96568815 -49020473 + (T)n Simple_repeat Simple_repeat 1 37 0 700 159 6 74 chr10 96568867 96569030 -49020258 + MLT1B LTR MaLR 164 315 -75 230 252 54 81 chr10 96569838 96569949 -49019339 + MER5B DNA MER1_type 2 109 -69 2071 95 16 118 chr10 96570373 96570814 -49018474 - L1MA8 LINE L1 -5 6286 5891 1831 139 13 26 chr10 96571303 96571612 -49017676 - AluSx SINE Alu -7 305 1 43 20 0 0 chr10 96572300 96572350 -49016938 + AT_rich Low_complexity Low_complexity 1 50 0 22 0 0 0 chr10 96574475 96574497 -49014791 + AT_rich Low_complexity Low_complexity 1 22 0 237 257 40 10 chr10 96574515 96574616 -49014672 + (TA)n Simple_repeat Simple_repeat 2 105 0 620 284 36 18 chr10 96575004 96575229 -49014059 + MIR SINE MIR 20 248 -14 24 0 0 0 chr10 96575766 96575790 -49013498 + GC_rich Low_complexity Low_complexity 1 24 0 189 300 46 122 chr10 96577427 96577690 -49011598 + L2 LINE L2 2978 3220 -52 445 195 0 0 chr10 96577712 96577799 -49011489 + L1MD3 LINE L1 7907 7993 -2 190 250 12 12 chr10 96577812 96577896 -49011392 + GA-rich Low_complexity Low_complexity 3 86 0 510 328 70 21 chr10 96577914 96578155 -49011133 - MIR SINE MIR -6 256 4 377 230 115 14 chr10 96578240 96578388 -49010900 + MER103 DNA DNA 2 164 -2 220 220 0 0 chr10 96578686 96578736 -49010552 + A-rich Low_complexity Low_complexity 1 50 0 1864 202 30 20 chr10 96578990 96579396 -49009892 - MLT2D LTR ERVL -4 410 1 187 246 7 7 chr10 96580366 96580504 -49008784 + CT-rich Low_complexity Low_complexity 4 141 0 563 192 0 79 chr10 96581015 96581218 -49008070 + MER113 DNA MER1_type? 45 231 -290 344 286 0 27 chr10 96581866 96581978 -49007310 + MIR SINE MIR 31 139 -123 24 0 0 0 chr10 96582041 96582065 -49007223 + AT_rich Low_complexity Low_complexity 1 24 0 195 189 0 0 chr10 96582367 96582420 -49006868 + CT-rich Low_complexity Low_complexity 2 54 0 357 287 81 35 chr10 96582799 96582973 -49006315 - L3 LINE CR1 -24 1553 1372 207 0 0 0 chr10 96583491 96583514 -49005774 + (TG)n Simple_repeat Simple_repeat 2 24 0 234 0 0 0 chr10 96583514 96583540 -49005748 + (T)n Simple_repeat Simple_repeat 1 26 0 458 248 114 34 chr10 96583540 96583689 -49005599 - MIR SINE MIR -56 206 46 309 250 91 11 chr10 96584094 96584182 -49005106 - MER5A DNA MER1_type -80 109 15 570 308 38 14 chr10 96584845 96585056 -49004232 - MIR SINE MIR -12 250 35 280 297 314 6 chr10 96585100 96585275 -49004013 - MIR SINE MIR -14 248 20 534 232 140 34 chr10 96585795 96586002 -49003286 - MIR SINE MIR 0 262 34 434 346 15 0 chr10 96586512 96586645 -49002643 - L2 LINE L2 -1 3271 3137 21 36 0 0 chr10 96587055 96587083 -49002205 + AT_rich Low_complexity Low_complexity 1 28 0 338 295 40 20 chr10 96588086 96588235 -49001053 + MIR SINE MIR 110 261 -1 212 0 36 0 chr10 96588235 96588263 -49001025 + (TAA)n Simple_repeat Simple_repeat 1 29 0 183 42 0 0 chr10 96588729 96588753 -49000535 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 730 171 21 36 chr10 96588753 96588946 -49000342 - L1PA2 LINE L1 -13 6142 5953 14650 159 33 28 chr10 96589052 96593506 -48995782 - L1MA3 LINE L1 -305 7419 2952 12971 168 32 5 chr10 96593506 96594030 -48995258 - L1MA3 LINE L1 -5267 2298 1790 477 0 0 0 chr10 96594030 96594083 -48995205 + (TC)n Simple_repeat Simple_repeat 2 54 0 12971 168 32 5 chr10 96594083 96595778 -48993510 - L1MA3 LINE L1 -5775 1790 18 7313 186 48 33 chr10 96595809 96596472 -48992816 - L1PA16 LINE L1 0 6166 5515 2377 82 0 10 chr10 96596472 96596775 -48992513 - AluSg SINE Alu -10 300 1 7313 186 48 33 chr10 96596775 96598798 -48990490 - L1PA16 LINE L1 -651 5515 3425 441 341 129 4 chr10 96599070 96599266 -48990022 + MIR SINE MIR 5 224 -38 244 355 124 14 chr10 96600088 96600370 -48988918 + L2 LINE L2 2432 2744 -570 1413 179 16 16 chr10 96600535 96600786 -48988502 + MLT1A1 LTR MaLR 115 365 0 1684 93 9 4 chr10 96600960 96601186 -48988102 + AluSg/x SINE Alu 83 309 -3 33 66 0 0 chr10 96601498 96601559 -48987729 + AT_rich Low_complexity Low_complexity 1 61 0 22 0 0 0 chr10 96602414 96602436 -48986852 + AT_rich Low_complexity Low_complexity 1 22 0 2394 84 3 3 chr10 96602662 96602972 -48986316 - AluSq SINE Alu -3 310 1 3192 155 83 11 chr10 96603285 96603911 -48985377 + L1MC3 LINE L1 6894 7564 -221 202 191 21 64 chr10 96604072 96604166 -48985122 + (TATAA)n Simple_repeat Simple_repeat 4 93 0 280 315 28 9 chr10 96605170 96605278 -48984010 + MIR SINE MIR 82 191 -71 2484 74 3 0 chr10 96606188 96606499 -48982789 - AluSp SINE Alu -1 312 1 246 321 112 37 chr10 96607034 96607168 -48982120 + L2 LINE L2 2920 3063 -209 1635 276 53 5 chr10 96607169 96607604 -48981684 + LTR40b LTR ERVL 7 462 0 2105 104 7 0 chr10 96607772 96608059 -48981229 + AluSq SINE Alu 1 289 -24 21 0 0 0 chr10 96608279 96608300 -48980988 + AT_rich Low_complexity Low_complexity 1 21 0 481 329 167 0 chr10 96609536 96609752 -48979536 + MIR SINE MIR 1 252 -10 246 279 143 26 chr10 96610282 96610436 -48978852 - L1ME4a LINE L1 -12 6109 5938 569 312 83 28 chr10 96610501 96610863 -48978425 + MLT1J LTR MaLR 1 382 -129 37 39 0 0 chr10 96611080 96611131 -48978157 + AT_rich Low_complexity Low_complexity 1 51 0 401 243 71 80 chr10 96611416 96611655 -48977633 - L1ME4a LINE L1 -410 5711 5475 2543 131 29 12 chr10 96612383 96612804 -48976484 + MSTA LTR MaLR 1 428 0 256 272 43 11 chr10 96613008 96613100 -48976188 - U13 snRNA snRNA -9 95 1 183 129 0 0 chr10 96613270 96613301 -48975987 + (TG)n Simple_repeat Simple_repeat 2 32 0 1872 270 93 26 chr10 96613304 96614612 -48974676 + L1ME3A LINE L1 4620 6023 -147 2817 193 25 26 chr10 96614824 96616103 -48973185 + L1MA7 LINE L1 4628 5884 -407 1914 108 8 0 chr10 96616103 96616361 -48972927 + AluSg SINE Alu 49 308 -2 2817 193 25 26 chr10 96616361 96616747 -48972541 + L1MA7 LINE L1 5884 6269 -22 614 286 11 11 chr10 96616753 96616931 -48972357 + MIR SINE MIR 20 197 -65 272 191 11 0 chr10 96617035 96617098 -48972190 - Alu SINE Alu -260 42 1 1822 149 57 3 chr10 96617099 96617276 -48972012 - L1 LINE L1 -1555 4591 4425 225 119 0 0 chr10 96617276 96617318 -48971970 + (TTG)n Simple_repeat Simple_repeat 2 43 0 1822 149 57 3 chr10 96617318 96617508 -48971780 - L1 LINE L1 -1721 4425 4204 205 286 110 33 chr10 96618242 96618333 -48970955 - L2 LINE L2 -190 3082 2985 285 208 0 0 chr10 96618660 96618737 -48970551 + (TA)n Simple_repeat Simple_repeat 1 77 0 180 0 0 0 chr10 96619333 96619353 -48969935 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1595 229 103 45 chr10 96620366 96620942 -48968346 + MLT1E2 LTR MaLR 4 626 0 188 253 13 101 chr10 96621715 96621794 -48967494 - L2 LINE L2 0 3313 3242 829 282 172 19 chr10 96621802 96622220 -48967068 + MLT1G1 LTR MaLR 114 595 0 225 331 105 38 chr10 96622379 96622512 -48966776 - L2 LINE L2 -583 2731 2590 360 228 9 35 chr10 96622651 96622765 -48966523 - L1MC5 LINE L1 -44 7917 7807 185 256 39 39 chr10 96622804 96622882 -48966406 - L2 LINE L2 -8 3305 3228 1233 281 108 4 chr10 96622930 96623400 -48965888 - LTR33 LTR ERVL 0 521 3 1537 265 53 2 chr10 96623558 96624011 -48965277 - L1ME3A LINE L1 -1 6169 5694 236 254 76 17 chr10 96625786 96625904 -48963384 + L1ME4a LINE L1 5984 6108 -13 243 306 36 90 chr10 96625939 96626161 -48963127 - MIR SINE MIR 0 262 53 2565 150 102 2 chr10 96626162 96626635 -48962653 + LTR64 LTR ERVK 1 520 -38 234 0 0 0 chr10 96626645 96626671 -48962617 + (TTAA)n Simple_repeat Simple_repeat 4 29 0 3380 188 35 3 chr10 96627450 96628083 -48961205 + MER82 DNA MER2_type 1 653 0 2333 99 3 6 chr10 96628645 96628957 -48960331 - AluSp SINE Alu 0 313 3 247 309 12 36 chr10 96629080 96629164 -48960124 + L2 LINE L2 3141 3222 -50 220 311 17 84 chr10 96629367 96629486 -48959802 + L2 LINE L2 3110 3220 -52 7189 277 104 17 chr10 96629513 96632385 -48956903 - L2 LINE L2 0 3313 213 185 231 13 90 chr10 96632671 96632749 -48956539 - L2 LINE L2 0 3313 3242 674 235 46 97 chr10 96632810 96633223 -48956065 - L1M4 LINE L1 -2726 3420 3029 345 313 40 13 chr10 96633508 96633808 -48955480 - L1M4 LINE L1 -3696 2450 2143 859 265 71 68 chr10 96634117 96634664 -48954624 - HAL1b LINE L1 -458 890 342 276 220 18 55 chr10 96634764 96634873 -48954415 - HAL1b LINE L1 -1018 330 226 24 0 0 0 chr10 96634874 96634898 -48954390 + AT_rich Low_complexity Low_complexity 1 24 0 243 227 0 0 chr10 96635231 96635275 -48954013 + polypyrimidine Low_complexity Low_complexity 2 45 0 306 0 0 0 chr10 96635940 96635974 -48953314 + (CA)n Simple_repeat Simple_repeat 2 35 0 308 243 0 14 chr10 96636104 96636174 -48953114 + MIR SINE MIR 56 124 -138 446 186 0 108 chr10 96636520 96636649 -48952639 + MLT1H LTR MaLR 421 535 -14 434 302 68 77 chr10 96636799 96637568 -48951720 + L1MEd LINE L1 446 1207 -4912 548 292 39 11 chr10 96637593 96637877 -48951411 + L1MEd LINE L1 1285 1576 -4734 716 208 0 21 chr10 96637908 96638052 -48951236 + MLT2D LTR ERVL 274 414 0 189 0 0 0 chr10 96638303 96638324 -48950964 + (T)n Simple_repeat Simple_repeat 1 21 0 413 234 64 0 chr10 96638445 96638539 -48950749 + L2 LINE L2 3171 3270 -2 278 311 222 19 chr10 96638953 96639165 -48950123 + MIR SINE MIR 2 256 -6 230 319 0 0 chr10 96639232 96639301 -48949987 + MIR3 SINE MIR 92 160 -48 430 370 69 5 chr10 96639510 96639713 -48949575 - L2 LINE L2 -240 3073 2858 263 247 12 12 chr10 96639715 96639796 -48949492 + MER103 DNA DNA 77 157 -9 2163 132 0 0 chr10 96639858 96640169 -48949119 - AluSx SINE Alu -1 311 1 289 284 167 0 chr10 96641258 96641360 -48947928 + L2 LINE L2 3149 3267 -5 2058 134 3 3 chr10 96642000 96642306 -48946982 - AluSx SINE Alu -6 306 1 405 315 101 39 chr10 96642668 96642925 -48946363 - L3 LINE CR1 -716 861 589 468 316 24 67 chr10 96643044 96643312 -48945976 - MIR SINE MIR -6 256 4 241 277 13 22 chr10 96643641 96643874 -48945414 + CT-rich Low_complexity Low_complexity 1 231 0 298 317 35 121 chr10 96643932 96644222 -48945066 - L2 LINE L2 0 3272 3008 307 276 71 0 chr10 96645197 96645295 -48943993 + MIR SINE MIR 90 194 -68 317 200 31 0 chr10 96645328 96645393 -48943895 - L2 LINE L2 0 3313 3247 458 335 80 13 chr10 96645862 96646101 -48943187 - MIR SINE MIR -3 259 5 220 213 16 0 chr10 96646342 96646403 -48942885 + (CTTAA)n Simple_repeat Simple_repeat 3 64 0 271 200 100 0 chr10 96646652 96646722 -48942566 + L1ME LINE L1 5743 5819 -302 504 59 26 4 chr10 96646791 96646942 -48942346 + AluY SINE Alu 3 212 -99 1079 265 68 33 chr10 96647049 96647415 -48941873 + L2 LINE L2 1932 2310 -1004 809 278 18 63 chr10 96647410 96647744 -48941544 + L2 LINE L2 2973 3291 -22 * 307 276 69 10 chr10 96647766 96647898 -48941390 - MIR SINE MIR -65 143 3 305 277 135 28 chr10 96648393 96648534 -48940754 + MIR SINE MIR 59 214 -48 528 312 48 11 chr10 96648700 96648889 -48940399 - MIR SINE MIR -52 210 15 259 387 116 6 chr10 96649076 96649404 -48939884 + L2 LINE L2 2554 2917 -397 375 239 91 129 chr10 96649495 96649889 -48939399 + L1ME4a LINE L1 5539 5904 -217 2289 102 0 10 chr10 96649889 96650202 -48939086 - AluSg SINE Alu 0 310 1 375 239 91 129 chr10 96650202 96650410 -48938878 + L1ME4a LINE L1 5904 6118 -3 252 368 53 41 chr10 96650422 96650688 -48938600 + L2 LINE L2 2995 3263 -9 6937 213 10 5 chr10 96651105 96653432 -48935856 - L1PA16 LINE L1 -2 6164 3824 274 311 55 12 chr10 96654381 96654545 -48934743 + L1MC4a LINE L1 5754 5924 -1884 535 323 40 15 chr10 96655577 96655778 -48933510 - MIR SINE MIR -36 226 21 622 128 0 0 chr10 96656031 96656117 -48933171 + AluS SINE Alu 3 88 -224 506 189 28 0 chr10 96656117 96656223 -48933065 + AluSg/x SINE Alu 191 299 -3 329 349 13 40 chr10 96656665 96656817 -48932471 + MIR3 SINE MIR 18 165 -43 4285 163 55 7 chr10 96656843 96657210 -48932078 - L1MB1 LINE L1 0 6168 5820 384 103 0 0 chr10 96657210 96657268 -48932020 + (TG)n Simple_repeat Simple_repeat 1 58 0 4285 163 55 7 chr10 96657268 96657747 -48931541 - L1MB1 LINE L1 -348 5820 5281 366 255 28 9 chr10 96657800 96657906 -48931382 + MIR SINE MIR 148 255 -7 569 208 19 0 chr10 96658385 96658491 -48930797 - MIR SINE MIR -90 172 65 3026 296 80 21 chr10 96659041 96660301 -48928987 - L2 LINE L2 -753 2561 1227 1480 221 7 0 chr10 96660609 96660889 -48928399 - AluJb SINE Alu -30 282 1 21 0 0 0 chr10 96661355 96661376 -48927912 + AT_rich Low_complexity Low_complexity 1 21 0 421 197 30 8 chr10 96662258 96662390 -48926898 + GA-rich Low_complexity Low_complexity 3 137 0 355 340 72 0 chr10 96662581 96662734 -48926554 - MIR SINE MIR -58 204 41 297 172 333 0 chr10 96662953 96663046 -48926242 + MER5B DNA MER1_type 50 173 -5 311 236 0 0 chr10 96663051 96663123 -48926165 - L3 LINE CR1 -561 1016 945 231 36 0 0 chr10 96663243 96663271 -48926017 + (TG)n Simple_repeat Simple_repeat 2 29 0 255 221 39 13 chr10 96663291 96663368 -48925920 + L1MC4 LINE L1 7933 8011 -31 273 257 40 0 chr10 96663396 96663470 -48925818 - Charlie2 DNA MER1_type -2758 104 28 298 259 83 19 chr10 96663861 96663969 -48925319 - L2 LINE L2 -5 3267 3153 1532 171 7 52 chr10 96665825 96666112 -48923176 - AluJo SINE Alu -38 274 1 306 299 121 19 chr10 96666156 96666363 -48922925 - MIR SINE MIR -15 247 20 821 291 75 28 chr10 96667446 96667804 -48921484 - MER76 LTR ERV -30 658 284 1188 175 4 29 chr10 96667841 96668087 -48921201 + L1PA16 LINE L1 5927 6166 0 207 0 0 0 chr10 96668218 96668241 -48921047 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1545 140 12 0 chr10 96669635 96669885 -48919403 + L1MA5 LINE L1 5537 5789 -511 648 106 69 0 chr10 96669889 96670110 -48919178 + (TA)n Simple_repeat Simple_repeat 1 236 0 830 133 0 7 chr10 96670113 96670248 -48919040 + L1MA5 LINE L1 5782 5915 -385 237 33 0 0 chr10 96670562 96670592 -48918696 + (CA)n Simple_repeat Simple_repeat 2 31 0 2461 71 0 3 chr10 96670659 96670968 -48918320 + AluSx SINE Alu 1 308 -4 1916 117 7 26 chr10 96670975 96671282 -48918006 + L1PA15 LINE L1 5844 6144 -21 631 282 53 6 chr10 96671619 96671789 -48917499 + MER5B DNA MER1_type 1 178 0 1406 146 20 4 chr10 96672343 96672499 -48916789 - L1MA6 LINE L1 0 6300 6137 1948 116 43 0 chr10 96672499 96672776 -48916512 + AluSg SINE Alu 8 296 -14 1406 146 20 4 chr10 96672776 96672866 -48916422 - L1MA6 LINE L1 -163 6137 6050 418 236 114 16 chr10 96672872 96672995 -48916293 - MIR SINE MIR -51 211 77 330 26 0 0 chr10 96674294 96674333 -48914955 + (CA)n Simple_repeat Simple_repeat 2 40 0 827 143 0 0 chr10 96674484 96674617 -48914671 - L1MA6 LINE L1 -38 6262 6130 206 364 48 18 chr10 96674725 96674890 -48914398 + L2 LINE L2 1474 1643 -1671 581 261 34 86 chr10 96674979 96675203 -48914085 - MIR SINE MIR -38 224 3 400 265 33 66 chr10 96675576 96675848 -48913440 - L1MB8 LINE L1 -174 6004 5742 2253 113 0 3 chr10 96676149 96676499 -48912789 - AluSc SINE Alu 0 349 1 290 348 43 0 chr10 96676560 96676698 -48912590 + MIR SINE MIR 107 250 -12 739 297 67 22 chr10 96677475 96677939 -48911349 + L1ME4a LINE L1 5631 6115 -6 294 182 0 0 chr10 96678446 96678512 -48910776 + (TG)n Simple_repeat Simple_repeat 2 67 0 1330 296 56 27 chr10 96678599 96679702 -48909586 + L1M4 LINE L1 2317 3451 -2695 287 317 39 19 chr10 96682485 96682589 -48906699 + L2 LINE L2 3188 3293 -20 244 338 0 0 chr10 96682821 96682892 -48906396 - L2 LINE L2 -4 3268 3198 258 259 26 43 chr10 96683191 96683307 -48905981 + GA-rich Low_complexity Low_complexity 5 118 0 1701 156 10 36 chr10 96683476 96683783 -48905505 - AluJb SINE Alu -9 303 5 247 229 94 62 chr10 96685111 96685207 -48904081 + L2 LINE L2 3174 3272 0 2458 150 42 16 chr10 96685755 96686254 -48903034 - L1MA8 LINE L1 0 6291 5780 3473 217 30 50 chr10 96686482 96686798 -48902490 - L1M4 LINE L1 -5639 903 582 1670 197 37 8 chr10 96686798 96687149 -48902139 + MLT1A1 LTR MaLR 4 364 -1 3473 217 30 50 chr10 96687149 96687739 -48901549 - L1M4 LINE L1 -5960 582 15 827 204 0 19 chr10 96688551 96688708 -48900580 + FRAM SINE Alu 1 154 -12 423 311 18 37 chr10 96688731 96688895 -48900393 + MIR3 SINE MIR 13 173 -35 1048 264 39 14 chr10 96689657 96690013 -48899275 + L1MC4 LINE L1 7205 7569 -473 1731 158 46 15 chr10 96690052 96690381 -48898907 + MER44D DNA MER2_type 1 609 0 26 50 0 0 chr10 96690517 96690557 -48898731 + AT_rich Low_complexity Low_complexity 1 40 0 218 388 106 16 chr10 96690738 96690926 -48898362 + MIR SINE MIR 2 206 -56 186 382 9 9 chr10 96690952 96691062 -48898226 + MIR SINE MIR 147 256 -6 2337 93 0 0 chr10 96691472 96691763 -48897525 - AluSc SINE Alu -18 291 1 25 0 0 0 chr10 96691774 96691799 -48897489 + AT_rich Low_complexity Low_complexity 1 25 0 302 277 0 0 chr10 96694064 96694147 -48895141 + L2 LINE L2 2900 2982 -290 1470 111 28 24 chr10 96694147 96694400 -48894888 - L1PA11 LINE L1 -2 6172 5919 1653 177 96 6 chr10 96694546 96694890 -48894398 - MLT1B LTR MaLR 0 390 16 683 253 62 8 chr10 96694914 96695171 -48894117 - L1ME LINE L1 -339 5823 5553 303 263 77 19 chr10 96695173 96695436 -48893852 - L1ME LINE L1 -710 5452 5171 247 235 10 41 chr10 96695583 96695681 -48893607 + L1MC4 LINE L1 6614 6708 -1334 * 1502 288 106 14 chr10 96695671 96696812 -48892476 - L1ME LINE L1 -1094 5052 3807 1944 109 42 16 chr10 96696820 96697289 -48891999 - MLT2A2 LTR ERVL -2 442 3 902 260 128 26 chr10 96697360 96698095 -48891193 - L1ME LINE L1 -2659 3487 2678 281 252 87 0 chr10 96698284 96698399 -48890889 + L1MEd LINE L1 714 838 -5281 407 294 48 0 chr10 96698518 96698664 -48890624 - HAL1 LINE L1 -821 1686 1534 282 298 34 75 chr10 96698672 96698785 -48890503 + L1MEd LINE L1 974 1090 -5029 2426 88 0 0 chr10 96698785 96699092 -48890196 + AluSx SINE Alu 1 307 -5 282 298 34 75 chr10 96699092 96699243 -48890045 + L1MEd LINE L1 1090 1227 -4892 1008 163 98 15 chr10 96699285 96699488 -48889800 - Tigger2 DNA MER2_type 0 2718 2499 6047 48 8 0 chr10 96699489 96700405 -48888883 + L1P2 LINE L1 4605 5527 -627 692 223 47 62 chr10 96700518 96700711 -48888577 + MER58A DNA MER1_type 35 224 0 1783 198 90 0 chr10 96700711 96701090 -48888198 + MER63 DNA MER1_type 648 1060 0 319 297 144 9 chr10 96701274 96701385 -48887903 - L2 LINE L2 -5 3267 3142 197 283 61 81 chr10 96701619 96701791 -48887497 + L2 LINE L2 2849 3016 -256 2120 73 52 3 chr10 96701791 96702077 -48887211 - AluY SINE Alu -11 300 1 197 283 61 81 chr10 96702077 96702151 -48887137 + L2 LINE L2 3016 3090 -182 339 367 45 11 chr10 96702434 96702611 -48886677 + MIR SINE MIR 4 186 -76 2312 110 0 0 chr10 96702774 96703082 -48886206 + AluSx SINE Alu 3 310 -2 2359 196 52 8 chr10 96703621 96704105 -48885183 + MLT1D LTR MaLR 1 505 0 389 268 201 26 chr10 96704735 96704929 -48884359 - Charlie8 DNA MER1_type -2188 229 2 308 350 70 0 chr10 96706508 96706651 -48882637 + MIR SINE MIR 104 256 -6 2127 269 62 16 chr10 96707226 96707914 -48881374 - L1ME3A LINE L1 -9 6161 5442 1217 227 46 5 chr10 96708732 96709118 -48880170 - MER63C DNA MER1_type -436 494 1 727 289 52 0 chr10 96709324 96709518 -48879770 - MIR SINE MIR -16 246 43 335 335 19 32 chr10 96711775 96711930 -48877358 + MER5B DNA MER1_type 15 167 -11 898 229 98 58 chr10 96712058 96712468 -48876820 + LTR37A LTR ERV1 1 426 0 449 285 8 0 chr10 96712855 96712985 -48876303 + L1MEd LINE L1 2 132 -5987 4680 170 89 38 chr10 96712988 96713378 -48875910 + L1MC1 LINE L1 4910 5279 -1054 2125 117 0 10 chr10 96713378 96713686 -48875602 + AluSq SINE Alu 1 305 -8 4680 170 89 38 chr10 96713686 96714346 -48874942 + L1MC1 LINE L1 5279 6035 -298 2240 120 0 0 chr10 96714346 96714654 -48874634 + AluSx SINE Alu 1 308 -4 4680 170 89 38 chr10 96714654 96714962 -48874326 + L1MC1 LINE L1 6035 6326 -7 612 99 0 0 chr10 96714962 96715043 -48874245 + AluSg/x SINE Alu 203 283 -27 25 31 0 0 chr10 96715043 96715075 -48874213 + AT_rich Low_complexity Low_complexity 1 32 0 261 338 0 7 chr10 96715117 96715259 -48874029 + L1M4 LINE L1 3499 3639 -2507 637 226 96 105 chr10 96715355 96715648 -48873640 + MER110A LTR ERV1 44 316 -164 1237 34 0 0 chr10 96715648 96715795 -48873493 - L1PA5 LINE L1 -7 6147 6001 637 226 96 105 chr10 96715795 96715959 -48873329 + MER110A LTR ERV1 316 480 0 348 137 0 0 chr10 96715978 96716029 -48873259 + AluJ/FRAM SINE Alu 223 273 -29 507 233 41 7 chr10 96716148 96716294 -48872994 + L1M4 LINE L1 3791 3941 -2205 775 259 68 93 chr10 96716464 96717454 -48871834 + L1M4 LINE L1 4032 4996 -1150 * 2012 222 54 121 chr10 96717445 96718180 -48871108 + L1ME1 LINE L1 4596 5188 -978 2121 111 7 3 chr10 96718180 96718477 -48870811 + AluSx SINE Alu 1 298 -14 2012 222 54 121 chr10 96718477 96719389 -48869899 + L1ME1 LINE L1 5188 6159 -7 234 239 119 0 chr10 96719386 96719453 -48869835 + L1M4 LINE L1 4795 4869 -1277 * 4845 93 1 1 chr10 96720114 96720782 -48868506 + L1PA10 LINE L1 5312 5979 -189 395 282 131 48 chr10 96721737 96722233 -48867055 + L1M4 LINE L1 2447 2983 -3163 1917 204 40 2 chr10 96723090 96723491 -48865797 + MLT2C2 LTR ERVL 1 416 -48 667 277 98 8 chr10 96725748 96725983 -48863305 + MIR SINE MIR 7 262 0 549 248 21 21 chr10 96726002 96726143 -48863145 + MLT1E LTR MaLR 2 142 -451 6581 86 3 0 chr10 96726153 96727047 -48862241 + L1PB1 LINE L1 5254 6150 -1 2073 139 24 24 chr10 96727076 96727458 -48861830 + L1MB2 LINE L1 5786 6167 -4 1277 175 65 86 chr10 96827921 96828073 -48761215 + MLT1B LTR MaLR 60 214 -176 324 0 0 0 chr10 96828073 96828109 -48761179 + (TC)n Simple_repeat Simple_repeat 1 36 0 1277 175 65 86 chr10 96828109 96828294 -48760994 + MLT1B LTR MaLR 214 390 0 1747 142 83 42 chr10 96828433 96828793 -48760495 - THE1C LTR MaLR 0 375 1 679 198 6 66 chr10 96828795 96828842 -48760446 + MIR SINE MIR 106 154 -108 1585 180 46 11 chr10 96828842 96829125 -48760163 + AluJo SINE Alu 3 295 -17 679 198 6 66 chr10 96829125 96829244 -48760044 + MIR SINE MIR 154 262 0 507 266 92 73 chr10 96829628 96829915 -48759373 - MLT1J2 LTR MaLR -19 431 93 344 301 92 10 chr10 96830309 96830515 -48758773 + HAL1 LINE L1 2285 2507 0 494 164 28 34 chr10 96830515 96830692 -48758596 + GA-rich Low_complexity Low_complexity 4 179 0 332 259 42 35 chr10 96830715 96830858 -48758430 + L1ME4a LINE L1 5782 5925 -196 2160 97 23 5 chr10 96830901 96831289 -48757999 - LTR7 LTR ERV1 -11 439 1 3345 91 62 47 chr10 96831289 96831838 -48757450 - HERVH LTR ERV1 0 7713 7157 1476 187 4 0 chr10 96831831 96832098 -48757190 - HERVH LTR ERV1 -1697 6016 5749 * 6715 132 5 7 chr10 96832095 96833235 -48756053 - HERVH LTR ERV1 -2287 4242 3809 * 9823 173 49 60 chr10 96833226 96836809 -48752479 - HERVH LTR ERV1 -4112 3601 1 2523 93 133 5 chr10 96836809 96837208 -48752080 - LTR7 LTR ERV1 0 450 1 24 0 0 0 chr10 96837381 96837405 -48751883 + AT_rich Low_complexity Low_complexity 1 24 0 2467 161 13 0 chr10 96838488 96838886 -48750402 - MER57A LTR ERV1 0 403 1 208 259 0 0 chr10 96838967 96839025 -48750263 - MIR SINE MIR -119 143 86 302 228 358 19 chr10 96839074 96839236 -48750052 + MIR SINE MIR 18 234 -28 195 220 40 40 chr10 96839207 96839257 -48750031 + L2 LINE L2 3251 3300 -13 * 2507 89 0 6 chr10 96839257 96839572 -48749716 - AluSp SINE Alu 0 313 1 196 343 67 22 chr10 96839626 96839760 -48749528 + MIR3 SINE MIR 60 199 -9 181 338 27 0 chr10 96839810 96839884 -48749404 + MIR SINE MIR 77 152 -110 391 256 31 23 chr10 96840271 96840400 -48748888 + MIR SINE MIR 28 157 -105 754 184 57 85 chr10 96840410 96840813 -48748475 - MER31B LTR ERV1 -1 465 1 28 29 0 0 chr10 96841669 96841704 -48747584 + AT_rich Low_complexity Low_complexity 1 35 0 487 282 75 24 chr10 96841794 96842049 -48747239 - L1MC4a LINE L1 -1928 5880 5613 22 35 0 0 chr10 96843011 96843040 -48746248 + AT_rich Low_complexity Low_complexity 1 29 0 38 68 0 0 chr10 96843054 96843127 -48746161 + AT_rich Low_complexity Low_complexity 1 73 0 337 252 218 7 chr10 96843365 96843512 -48745776 + MIR SINE MIR 78 255 -7 198 291 0 0 chr10 96844377 96844432 -48744856 - L2 LINE L2 0 3313 3259 199 300 0 0 chr10 96844690 96844750 -48744538 - L2 LINE L2 0 3313 3254 367 352 28 0 chr10 96844787 96844969 -48744319 - MIR SINE MIR -4 258 72 183 289 79 13 chr10 96845201 96845277 -48744011 - L2 LINE L2 -8 3264 3184 495 226 44 130 chr10 96845278 96845548 -48743740 + MIR SINE MIR 16 262 0 194 229 157 0 chr10 96845909 96845979 -48743309 - MIR SINE MIR -150 112 32 745 228 35 18 chr10 96845982 96846153 -48743135 - MER96 DNA MER1_type 0 175 2 267 331 54 14 chr10 96846404 96846552 -48742736 - MIR3 SINE MIR -23 185 32 2435 227 84 13 chr10 96846573 96847180 -48742108 - MLT2F LTR ERVL 0 663 14 1006 173 99 30 chr10 96848203 96848405 -48740883 - MER58A DNA MER1_type -8 216 1 6541 91 15 0 chr10 96849182 96850146 -48739142 + L1PA12 LINE L1 5183 6159 -9 1701 175 0 38 chr10 96850146 96850460 -48738828 - AluJb SINE Alu -10 302 1 1377 278 24 5 chr10 96850460 96850842 -48738446 - ERVL LTR ERVL -430 5334 4946 5138 251 71 7 chr10 96850843 96852224 -48737064 - ERVL LTR ERVL -1879 3885 2417 2058 81 0 26 chr10 96852925 96853197 -48736091 - AluSc SINE Alu -44 265 1 2189 88 0 0 chr10 96853233 96853507 -48735781 - AluY SINE Alu -9 302 29 236 244 163 38 chr10 96853541 96853750 -48735538 + L1ME4a LINE L1 5767 6001 -120 498 322 97 0 chr10 96853852 96854079 -48735209 - MIR SINE MIR -6 256 8 660 267 114 81 chr10 96854298 96854497 -48734791 + LTR33 LTR ERVL 23 214 -307 2725 10 0 0 chr10 96854497 96854800 -48734488 - L1PA2 LINE L1 0 6155 5853 660 267 114 81 chr10 96854800 96855083 -48734205 + LTR33 LTR ERVL 214 521 0 3708 101 60 5 chr10 96855601 96856155 -48733133 - Tigger4(Zombi) DNA MER2_type 0 2731 2148 1144 161 98 5 chr10 96856177 96856382 -48732906 - Tigger4(Zombi) DNA MER2_type -2507 224 1 305 164 0 0 chr10 96856336 96856391 -48732897 + MER46A DNA MER2_type 99 153 -83 * 7375 165 71 105 chr10 96856791 96858608 -48730680 + MER52A LTR ERV1 1 1755 0 351 213 32 21 chr10 96859543 96859637 -48729651 - MER5A DNA MER1_type -84 105 11 282 165 13 51 chr10 96860643 96860722 -48728566 - Charlie8 DNA MER1_type -2265 152 77 1644 113 0 0 chr10 96860724 96860945 -48728343 - AluSg/x SINE Alu -19 291 71 185 333 13 0 chr10 96862082 96862160 -48727128 + MIR SINE MIR 182 260 -2 3340 202 79 28 chr10 96862178 96863001 -48726287 - L1ME1 LINE L1 -6 6229 5365 3534 169 57 28 chr10 96863040 96863755 -48725533 - L1MB8 LINE L1 -13 6165 5430 1167 218 71 20 chr10 96863768 96864121 -48725167 - L1ME1 LINE L1 -966 5249 4879 1508 266 50 64 chr10 96864158 96864782 -48724506 - L1ME1 LINE L1 -5754 642 28 1718 182 102 31 chr10 96864918 96865331 -48723957 + MER65A LTR ERV1 1 442 -3 340 242 137 16 chr10 96865520 96865644 -48723644 - MIR SINE MIR -42 220 82 673 272 196 3 chr10 96865649 96865995 -48723293 + L2 LINE L2 1909 2321 -993 443 226 126 70 chr10 96866007 96866433 -48722855 + LTR33A LTR ERVL 3 523 0 836 260 117 14 chr10 96866437 96866718 -48722570 + L2 LINE L2 2319 2628 -686 2261 131 28 31 chr10 96866718 96867076 -48722212 + THE1B LTR MaLR 1 357 -7 11773 97 2 3 chr10 96867079 96868661 -48720627 + THE1B-int LTR MaLR 1 1580 0 2312 128 33 19 chr10 96868661 96869020 -48720268 + THE1B LTR MaLR 1 364 0 816 308 146 6 chr10 96869051 96869415 -48719873 + L2 LINE L2 2687 2999 -314 2100 118 7 0 chr10 96869415 96869712 -48719576 - AluSx SINE Alu -13 299 1 195 45 0 68 chr10 96869714 96869758 -48719530 + (TTG)n Simple_repeat Simple_repeat 2 42 0 816 308 146 6 chr10 96869758 96869920 -48719368 + L2 LINE L2 2999 3301 -12 24 0 0 0 chr10 96869981 96870005 -48719283 + AT_rich Low_complexity Low_complexity 1 24 0 211 305 99 14 chr10 96870911 96871124 -48718164 + MIR SINE MIR 14 244 -18 193 316 0 26 chr10 96871234 96871310 -48717978 - L2 LINE L2 -22 3250 3177 181 257 0 0 chr10 96871339 96871374 -48717914 - L2 LINE L2 -185 3087 3053 2463 70 6 13 chr10 96871835 96872148 -48717140 + AluY SINE Alu 1 311 0 1326 228 73 42 chr10 96872330 96872825 -48716463 - L1ME1 LINE L1 -7 6159 5650 233 333 46 0 chr10 96872854 96872941 -48716347 + MIR SINE MIR 42 132 -76 2181 52 10 38 chr10 96873458 96873797 -48715491 + AluY SINE Alu 1 331 0 22 0 0 0 chr10 96873797 96873819 -48715469 + AT_rich Low_complexity Low_complexity 1 22 0 1896 92 32 0 chr10 96873820 96874070 -48715218 + AluSg SINE Alu 37 294 -16 2151 101 7 0 chr10 96874075 96874356 -48714932 + AluSg SINE Alu 1 282 -28 401 0 36 18 chr10 96874356 96874412 -48714876 + (TAAA)n Simple_repeat Simple_repeat 4 180 0 2160 106 6 34 chr10 96874830 96875151 -48714137 - AluSx SINE Alu 0 312 1 27 49 0 0 chr10 96875757 96875798 -48713490 + AT_rich Low_complexity Low_complexity 1 41 0 25 0 0 0 chr10 96876864 96876889 -48712399 + AT_rich Low_complexity Low_complexity 1 25 0 966 256 131 25 chr10 96877036 96877451 -48711837 - L1MC4a LINE L1 -1844 5964 5514 183 80 0 0 chr10 96877464 96877489 -48711799 + (TA)n Simple_repeat Simple_repeat 1 25 0 785 106 0 0 chr10 96877638 96877742 -48711546 - AluSp/q SINE Alu -11 302 199 22 35 0 0 chr10 96878659 96878688 -48710600 + AT_rich Low_complexity Low_complexity 1 29 0 180 355 7 50 chr10 96879112 96879253 -48710035 + L2 LINE L2 2342 2476 -838 199 301 27 27 chr10 96880235 96880308 -48708980 - MIR3 SINE MIR -49 159 87 23 0 0 0 chr10 96880413 96880436 -48708852 + AT_rich Low_complexity Low_complexity 1 23 0 186 344 40 24 chr10 96881114 96881239 -48708049 + L2 LINE L2 2952 3078 -194 512 287 37 32 chr10 96881572 96881760 -48707528 + MIR SINE MIR 4 192 -70 34 42 0 0 chr10 96881815 96881863 -48707425 + AT_rich Low_complexity Low_complexity 1 48 0 571 231 141 0 chr10 96881863 96881984 -48707304 - FRAM SINE Alu -38 138 1 373 319 52 0 chr10 96882382 96882498 -48706790 + MIR SINE MIR 2 123 -139 186 222 0 0 chr10 96882589 96882625 -48706663 - L2 LINE L2 -72 3241 3206 490 273 67 31 chr10 96882819 96883013 -48706275 - MIR SINE MIR -19 243 43 256 296 0 74 chr10 96883156 96883264 -48706024 + MIR SINE MIR 163 262 0 16361 121 45 49 chr10 96883351 96885007 -48704281 - Tigger2 DNA MER2_type 0 2718 1076 1574 203 3 20 chr10 96885007 96885308 -48703980 - AluJo SINE Alu -16 296 1 16361 121 45 49 chr10 96885308 96886380 -48702908 - Tigger2 DNA MER2_type -1642 1076 1 464 286 62 25 chr10 96887277 96887438 -48701850 + MIR SINE MIR 7 173 -89 203 270 68 74 chr10 96888207 96888370 -48700918 + L2 LINE L2 3056 3217 -55 277 93 0 0 chr10 96888370 96888413 -48700875 + MADE1 DNA Mariner 1 43 -37 863 169 22 0 chr10 96888435 96888571 -48700717 - AluSx SINE Alu -31 279 141 909 64 0 0 chr10 96888572 96888682 -48700606 - AluSx SINE Alu -202 110 1 318 98 0 20 chr10 96888682 96888733 -48700555 + MADE1 DNA Mariner 31 80 0 1593 184 11 28 chr10 96890538 96890821 -48698467 + AluJo SINE Alu 17 294 -18 210 318 79 16 chr10 96890896 96890959 -48698329 - MER91C DNA MER1_type -35 105 39 217 313 50 0 chr10 96891478 96891577 -48697711 - MIR SINE MIR -11 251 148 1804 158 4 0 chr10 96891695 96891974 -48697314 + AluJb SINE Alu 1 280 -32 180 0 0 0 chr10 96891974 96891994 -48697294 + (CAAT)n Simple_repeat Simple_repeat 4 23 0 450 222 32 56 chr10 96892016 96892142 -48697146 + L2 LINE L2 3189 3311 -2 5267 132 61 23 chr10 96892340 96892532 -48696756 - L1MC1 LINE L1 -1 6332 6149 2214 113 0 7 chr10 96892532 96892832 -48696456 - AluSx SINE Alu -14 298 1 5267 132 61 23 chr10 96892832 96893505 -48695783 - L1MC1 LINE L1 -184 6149 5434 25 75 0 0 chr10 96893586 96893639 -48695649 + AT_rich Low_complexity Low_complexity 1 53 0 589 288 25 10 chr10 96894673 96894871 -48694417 + MIR SINE MIR 59 259 -3 1389 259 127 11 chr10 96895030 96895488 -48693800 + L1ME3A LINE L1 5652 6165 -5 386 200 18 27 chr10 96896021 96896131 -48693157 - L1ME4a LINE L1 -2 6119 6011 285 296 11 0 chr10 96896228 96896316 -48692972 - L1ME LINE L1 -462 5659 5571 2180 142 33 38 chr10 96896447 96896813 -48692475 - THE1B LTR MaLR 0 364 1 524 184 0 0 chr10 96898119 96898195 -48691093 - AluJ/FLAM SINE Alu -235 77 2 21 0 0 0 chr10 96898196 96898217 -48691071 + AT_rich Low_complexity Low_complexity 1 21 0 229 182 0 23 chr10 96898222 96898266 -48691022 - MER58A DNA MER1_type -167 57 15 231 279 0 15 chr10 96899679 96899747 -48689541 + GA-rich Low_complexity Low_complexity 5 71 0 250 335 45 6 chr10 96900251 96900427 -48688861 + L1ME4a LINE L1 5939 6121 0 22 0 0 0 chr10 96900545 96900567 -48688721 + AT_rich Low_complexity Low_complexity 1 22 0 1027 171 19 46 chr10 96900670 96900886 -48688402 - L1PA16 LINE L1 -6 6160 5951 571 216 64 8 chr10 96901271 96901396 -48687892 + L2 LINE L2 3182 3313 0 1969 161 78 47 chr10 96901586 96901970 -48687318 - MSTD LTR MaLR 0 396 1 1908 167 3 13 chr10 96902022 96902334 -48686954 + AluJb SINE Alu 1 309 -3 666 35 0 0 chr10 96902334 96902419 -48686869 + (GGAAA)n Simple_repeat Simple_repeat 1 85 0 756 243 81 6 chr10 96902779 96902952 -48686336 - MER5A DNA MER1_type -3 186 1 1712 157 16 19 chr10 96903536 96903848 -48685440 + AluSx SINE Alu 1 311 -1 7958 229 52 56 chr10 96904293 96906039 -48683249 + L1M2 LINE L1 10 1746 -5103 2117 112 10 0 chr10 96906039 96906334 -48682954 + AluSx SINE Alu 7 304 -8 7958 229 52 56 chr10 96906334 96906966 -48682322 + L1M2 LINE L1 1746 2379 -4470 5662 141 15 1 chr10 96906975 96907891 -48681397 + L1MA4A LINE L1 5369 6297 -6 2024 79 16 0 chr10 96908034 96908288 -48681000 + AluSx SINE Alu 1 258 -54 571 289 92 4 chr10 96908343 96908571 -48680717 - MIR SINE MIR 0 262 15 271 216 54 117 chr10 96908574 96908685 -48680603 - L2 LINE L2 0 3313 3210 673 250 6 18 chr10 96910547 96910711 -48678577 - MER5A DNA MER1_type 0 189 28 243 255 20 10 chr10 96912049 96912147 -48677141 + (TTTG)n Simple_repeat Simple_repeat 2 100 0 26 74 0 0 chr10 96912310 96912364 -48676924 + AT_rich Low_complexity Low_complexity 1 54 0 1993 125 16 23 chr10 96918568 96918873 -48670415 + AluSx SINE Alu 1 303 -9 360 269 32 0 chr10 96919093 96919186 -48670102 - L1ME LINE L1 -614 5548 5453 270 300 9 36 chr10 96919294 96919404 -48669884 + CT-rich Low_complexity Low_complexity 2 108 0 1933 141 0 17 chr10 96919486 96919783 -48669505 + AluJb SINE Alu 1 292 -20 2010 68 0 4 chr10 96919898 96920148 -48669140 + AluY SINE Alu 45 293 -18 473 233 139 93 chr10 96920414 96920586 -48668702 - MER5A DNA MER1_type 0 189 10 2955 149 92 37 chr10 96920771 96921370 -48667918 + L1MB8 LINE L1 5546 6177 -1 1819 243 98 43 chr10 96921661 96921717 -48667571 - Zaphod DNA AcHobo -3397 634 583 2156 116 7 0 chr10 96921717 96922009 -48667279 + AluSc SINE Alu 3 296 -13 1819 243 98 43 chr10 96922009 96922552 -48666736 - Zaphod DNA AcHobo -3448 583 2 609 0 0 0 chr10 96923246 96923315 -48665973 - L1PA2 LINE L1 -4 6151 6083 30341 62 6 3 chr10 96923424 96929555 -48659733 + L1PA5 LINE L1 2 6150 -4 393 319 34 59 chr10 96929572 96929895 -48659393 + L1PA12 LINE L1 7 321 -7260 7378 172 18 64 chr10 96930452 96932097 -48657191 + L1P LINE L1 3824 5392 -754 664 251 78 17 chr10 96932097 96932304 -48656984 - L1MA9 LINE L1 -400 5912 5688 688 56 0 0 chr10 96932304 96932393 -48656895 + L1PA6 LINE L1 6066 6154 0 664 251 78 17 chr10 96932393 96932416 -48656872 - L1MA9 LINE L1 -624 5688 5668 5360 118 11 3 chr10 96932422 96933203 -48656085 + L1PA15 LINE L1 5374 6161 -4 6336 89 27 14 chr10 96933203 96934060 -48655228 + L1MA3 LINE L1 5417 6305 0 200 267 33 33 chr10 96934063 96934123 -48655165 + MER5A DNA MER1_type 49 108 -81 2678 122 53 107 chr10 96934158 96934596 -48654692 - MER4B LTR ERV1 -36 574 177 2305 119 0 0 chr10 96934596 96934907 -48654381 + AluSx SINE Alu 1 311 -1 2678 122 53 107 chr10 96934907 96935075 -48654213 - MER4B LTR ERV1 -433 177 1 652 277 45 13 chr10 96936116 96936355 -48652933 + L1ME1 LINE L1 5932 6330 -4 2908 81 98 5 chr10 96937096 96937506 -48651782 - LTR7 LTR ERV1 -2 448 1 518 253 6 63 chr10 96937510 96937684 -48651604 - MIR SINE MIR -39 223 60 200 308 132 0 chr10 96937968 96938059 -48651229 - MIR SINE MIR -65 143 41 320 330 34 0 chr10 96938161 96938279 -48651009 + MER5A DNA MER1_type 1 122 -67 565 245 148 79 chr10 96938288 96938480 -48650808 - LTR24B LTR ERV1 -2 574 397 1815 153 4 4 chr10 96938480 96938800 -48650488 - AluSx SINE Alu 0 320 1 565 245 148 79 chr10 96938800 96938905 -48650383 - LTR24B LTR ERV1 -179 397 301 2000 148 3 0 chr10 96938905 96939209 -48650079 + AluJb SINE Alu 1 305 -7 565 245 148 79 chr10 96939209 96939278 -48650010 - LTR24B LTR ERV1 -275 301 238 1745 106 0 0 chr10 96939278 96939505 -48649783 + AluSg SINE Alu 1 227 -83 565 245 148 79 chr10 96939505 96939669 -48649619 - LTR24B LTR ERV1 -338 238 4 183 318 53 71 chr10 96940558 96940728 -48648560 + MER5A DNA MER1_type 8 174 -15 762 150 60 0 chr10 96940883 96941016 -48648272 + FLAM_C SINE Alu 3 143 0 238 200 341 44 chr10 96941113 96941248 -48648040 + MER5A DNA MER1_type 9 183 -6 2412 81 10 0 chr10 96941811 96942118 -48647170 - AluSg SINE Alu 0 310 1 859 160 0 0 chr10 96943321 96943446 -48645842 + FLAM_C SINE Alu 1 125 -18 694 155 0 14 chr10 96943446 96943588 -48645700 + GA-rich Low_complexity Low_complexity 4 143 0 1840 168 3 13 chr10 96944711 96945026 -48644262 - AluJb SINE Alu 0 312 1 227 209 0 23 chr10 96945191 96945234 -48644054 + Tigger5 DNA MER2_type 27 68 -2255 1682 100 48 8 chr10 96945237 96945486 -48643802 + Tigger5 DNA MER2_type 2064 2322 -1 * 2669 165 58 13 chr10 96945486 96945934 -48643354 - MLT2B1 LTR ERVL -52 468 1 2504 75 0 0 chr10 96947604 96947909 -48641379 + AluY SINE Alu 1 305 -6 1341 119 24 5 chr10 96949205 96949415 -48639873 + L1MA8 LINE L1 6071 6284 -7 2208 169 137 26 chr10 96950377 96950984 -48638304 - MER39 LTR ERV1 0 707 1 264 252 138 50 chr10 96951286 96951445 -48637843 + MIR SINE MIR 18 190 -72 1251 279 73 90 chr10 96951447 96952247 -48637041 + L1MEd LINE L1 6 818 -5301 1825 114 15 0 chr10 96952247 96952509 -48636779 + AluSq SINE Alu 35 300 -13 1251 279 73 90 chr10 96952509 96952574 -48636714 + L1MEd LINE L1 818 883 -5236 2152 123 0 0 chr10 96952574 96952898 -48636390 + AluSx SINE Alu 1 324 0 1251 279 73 90 chr10 96952898 96953300 -48635988 + L1MEd LINE L1 883 1254 -4865 342 299 69 42 chr10 96953346 96953490 -48635798 + HAL1 LINE L1 1441 1588 -919 1082 204 35 9 chr10 96953504 96953735 -48635553 - L1MC4a LINE L1 0 7808 7572 2746 204 56 2 chr10 96954356 96954872 -48634416 - MER68 LTR ERV1 -8 554 11 1560 225 108 40 chr10 96954872 96955812 -48633476 - HERVL68-B1 LTR ERVL -7 3030 1993 797 184 0 7 chr10 96955819 96955960 -48633328 - LTR39 LTR ERV1 0 783 644 * 1486 126 13 0 chr10 96955951 96956181 -48633107 - LTR39 LTR ERV1 -550 233 1 513 183 114 0 chr10 96956189 96956320 -48632968 - HERVL68-B1 LTR ERVL -1055 1982 1837 942 239 169 55 chr10 96956324 96956852 -48632436 + LTR48B LTR ERV1 7 643 -1 1321 213 4 16 chr10 96956852 96957106 -48632182 - HERVL68-B1 LTR ERVL -1203 1834 1584 1027 214 107 81 chr10 96957110 96957531 -48631757 + MER34B LTR ERV1 5 436 -129 3151 92 10 51 chr10 96957533 96957643 -48631645 - LTR15 LTR ERV1 -25 468 355 2201 93 0 3 chr10 96957643 96957932 -48631356 - AluSc SINE Alu -21 288 1 3151 92 10 51 chr10 96957932 96958309 -48630979 - LTR15 LTR ERV1 -138 355 1 2074 131 0 3 chr10 96958361 96958652 -48630636 + AluJb SINE Alu 1 290 -22 2051 206 46 28 chr10 96958741 96959237 -48630051 - HERVL68-B1 LTR ERVL -1534 1503 999 2769 213 24 64 chr10 96959244 96959919 -48629369 + MER72 LTR ERV1 1 648 -74 381 173 67 0 chr10 96959919 96959994 -48629294 - LTR8A LTR ERV1 0 727 648 2488 89 3 46 chr10 96959997 96960368 -48628920 + MER4A LTR ERV1 3 357 -307 2692 149 52 17 chr10 96960377 96960854 -48628434 + MER50 LTR ERV1 1 494 -240 268 61 0 0 chr10 96960874 96960907 -48628381 - MER4A LTR ERV1 -498 166 134 * 1541 128 10 102 chr10 96960897 96961018 -48628270 + MER50 LTR ERV1 434 565 -169 1976 98 0 4 chr10 96961018 96961283 -48628005 + AluY SINE Alu 33 296 -15 1541 128 10 102 chr10 96961283 96961474 -48627814 + MER50 LTR ERV1 565 717 -17 1693 114 23 7 chr10 96961502 96961810 -48627478 + MER4E LTR ERV1 355 779 0 2971 172 53 43 chr10 96961810 96961888 -48627400 - LTR8A LTR ERV1 -77 650 574 2144 129 0 0 chr10 96961888 96962191 -48627097 - AluSg SINE Alu -5 305 3 2971 172 53 43 chr10 96962191 96962756 -48626532 - LTR8A LTR ERV1 -153 574 1 545 101 0 13 chr10 96962756 96962833 -48626455 + MER72 LTR ERV1 645 720 -2 1754 179 7 159 chr10 96962831 96962851 -48626437 - MER21B LTR ERV1 -394 469 448 3957 143 26 37 chr10 96962851 96963493 -48625795 + MER41B LTR ERV1 1 635 0 1754 179 7 159 chr10 96963493 96963659 -48625629 - MER21B LTR ERV1 -415 448 259 3981 121 8 0 chr10 96963659 96964182 -48625106 + MER1A DNA MER1_type 1 527 0 1754 179 7 159 chr10 96964182 96964542 -48624746 - MER21B LTR ERV1 -604 259 5 4958 137 39 5 chr10 96965540 96966344 -48622944 + L1MA4 LINE L1 5420 6250 -50 28 61 0 0 chr10 96966628 96966677 -48622611 + AT_rich Low_complexity Low_complexity 1 49 0 210 91 0 0 chr10 96967111 96967144 -48622144 + (TC)n Simple_repeat Simple_repeat 2 34 0 399 21 0 0 chr10 96967144 96967192 -48622096 + (CA)n Simple_repeat Simple_repeat 1 48 0 279 291 85 37 chr10 96967272 96967437 -48621851 - MIR SINE MIR -62 200 35 510 352 97 11 chr10 96967685 96967861 -48621427 + MER91A DNA MER1_type 1 191 -5 843 95 48 16 chr10 96967896 96968022 -48621266 - AluSp SINE Alu -183 130 1 1421 195 29 93 chr10 96968102 96968512 -48620776 - MLT1B LTR MaLR 0 390 7 369 156 0 78 chr10 96969122 96969199 -48620089 + MER92B LTR ERV1 1 71 -565 1974 148 0 28 chr10 96969210 96969527 -48619761 - AluJb SINE Alu 0 312 5 2393 81 7 0 chr10 96970823 96971121 -48618167 + AluY SINE Alu 1 300 -11 289 61 20 20 chr10 96971967 96972016 -48617272 + (TA)n Simple_repeat Simple_repeat 1 49 0 9697 39 4 0 chr10 96972637 96973808 -48615480 - L1PA5 LINE L1 -850 5296 4121 7263 42 22 8 chr10 96973808 96974665 -48614623 + L1PA5 LINE L1 5283 6154 0 1399 193 15 22 chr10 96975152 96975421 -48613867 - AluJo SINE Alu -17 295 29 323 155 12 0 chr10 96976193 96976277 -48613011 + (CA)n Simple_repeat Simple_repeat 2 86 0 621 229 39 58 chr10 96977377 96977535 -48611753 - MER3 DNA MER1_type 0 209 54 1767 161 3 32 chr10 96977535 96977846 -48611442 - AluJo SINE Alu 0 312 11 621 229 39 58 chr10 96977846 96977892 -48611396 - MER3 DNA MER1_type -155 54 9 952 183 46 73 chr10 96977900 96978058 -48611230 - MER20 DNA MER1_type -1 218 65 1990 121 7 7 chr10 96978058 96978363 -48610925 + AluSx SINE Alu 1 305 0 952 183 46 73 chr10 96978363 96978422 -48610866 - MER20 DNA MER1_type -154 65 6 1397 132 24 5 chr10 96979185 96979398 -48609890 + L1PA15 LINE L1 5797 6013 -152 2623 46 0 7 chr10 96980374 96980681 -48608607 + AluY SINE Alu 1 305 -6 263 281 230 7 chr10 96981081 96981220 -48608068 - MER5A DNA MER1_type -11 178 9 601 181 31 114 chr10 96981237 96981430 -48607858 - MER5B DNA MER1_type -1 177 1 200 263 121 50 chr10 96981431 96981530 -48607758 - MIR3 SINE MIR -49 159 54 525 296 48 11 chr10 96982458 96982647 -48606641 - MIR SINE MIR -54 208 13 2112 135 3 3 chr10 96983229 96983540 -48605748 + AluSx SINE Alu 1 311 -1 1259 201 12 16 chr10 96983902 96984151 -48605137 + MER90 LTR ERV1 123 370 -205 354 247 0 0 chr10 96984157 96984230 -48605058 - MLT1J2 LTR MaLR -344 106 34 1010 277 63 70 chr10 96985595 96986083 -48603205 - LTR33 LTR ERVL -32 489 5 1054 181 11 6 chr10 96986548 96986730 -48602558 + MER5A DNA MER1_type 6 188 -1 2456 70 0 3 chr10 96987078 96987380 -48601908 + AluY SINE Alu 1 301 -10 1786 148 14 3 chr10 96987761 96988051 -48601237 - AluJb SINE Alu -13 299 7 298 384 111 17 chr10 96988277 96988449 -48600839 + MER91A DNA MER1_type 1 188 -8 1785 148 57 10 chr10 96989096 96989394 -48599894 - AluSx SINE Alu 0 312 1 187 75 0 50 chr10 96989453 96989493 -48599795 + (TTATA)n Simple_repeat Simple_repeat 4 41 0 2850 167 47 0 chr10 96992114 96992558 -48596730 + LTR24 LTR ERV1 1 465 -2 833 201 0 35 chr10 96993354 96993523 -48595765 - FAM SINE Alu -13 172 10 243 103 0 0 chr10 96994262 96994301 -48594987 + (TG)n Simple_repeat Simple_repeat 2 40 0 2555 53 0 7 chr10 96994361 96994665 -48594623 + AluY SINE Alu 1 302 -9 209 262 0 0 chr10 96995092 96995134 -48594154 + (TGGA)n Simple_repeat Simple_repeat 4 45 0 225 250 125 0 chr10 96995137 96995217 -48594071 + L1MC4 LINE L1 7924 8013 -29 2249 108 0 0 chr10 96995439 96995735 -48593553 - AluSx SINE Alu -16 296 1 569 192 108 8 chr10 96995982 96996112 -48593176 + L1MD2 LINE L1 6197 6339 -20 23 33 0 0 chr10 96997005 96997035 -48592253 + AT_rich Low_complexity Low_complexity 1 30 0 348 268 33 65 chr10 96997276 96997296 -48591992 - MER5B DNA MER1_type -23 155 136 2548 63 3 16 chr10 96997296 96997611 -48591677 - AluSp SINE Alu 0 313 3 348 268 33 65 chr10 96997611 96997743 -48591545 - MER5B DNA MER1_type -42 136 8 214 309 107 48 chr10 96997770 96997854 -48591434 - MIR SINE MIR -72 136 48 1763 147 3 11 chr10 96998556 96998841 -48590447 - AluJo SINE Alu -27 285 3 2234 108 3 3 chr10 96998848 96999155 -48590133 - AluSc SINE Alu -2 307 1 180 176 59 39 chr10 96999195 96999246 -48590042 - MIR SINE MIR 0 262 211 2222 112 10 0 chr10 97000780 97001083 -48588205 + AluSx SINE Alu 1 306 -6 28 29 0 0 chr10 97001221 97001256 -48588032 + AT_rich Low_complexity Low_complexity 1 35 0 411 292 88 26 chr10 97001265 97001366 -48587922 - MIR SINE MIR -12 250 157 1755 153 163 3 chr10 97001366 97001666 -48587622 - MER7A DNA MER2_type 0 346 1 411 292 88 26 chr10 97001666 97001756 -48587532 - MIR SINE MIR -105 157 47 225 0 0 0 chr10 97001907 97001932 -48587356 + (TA)n Simple_repeat Simple_repeat 1 25 0 4554 167 12 61 chr10 97001965 97002252 -48587036 - L1MB5 LINE L1 0 6174 5875 5350 164 34 22 chr10 97002252 97003143 -48586145 - MER54A LTR ERVL 0 901 1 4554 167 12 61 chr10 97003143 97003559 -48585729 - L1MB5 LINE L1 -299 5875 5528 2272 181 32 45 chr10 97003559 97004022 -48585266 - MSTB2 LTR MaLR 0 457 1 4554 167 12 61 chr10 97004022 97004283 -48585005 - L1MB5 LINE L1 -646 5528 5256 517 247 130 36 chr10 97004409 97004625 -48584663 - L1P4 LINE L1 -304 5817 5599 39 22 0 0 chr10 97004633 97004679 -48584609 + AT_rich Low_complexity Low_complexity 1 46 0 240 294 0 6 chr10 97004744 97004835 -48584453 - L1P4 LINE L1 -663 5492 5404 822 189 0 0 chr10 97004849 97004971 -48584317 - FLAM_C SINE Alu -12 131 10 6939 182 23 16 chr10 97005200 97005396 -48583892 - L1MB3 LINE L1 -1 6182 5989 3942 62 9 0 chr10 97005396 97005850 -48583438 + LTR22A LTR ERVK 1 458 0 6939 182 23 16 chr10 97005850 97006987 -48582301 - L1MB3 LINE L1 -194 5989 4825 1313 219 47 77 chr10 97006987 97007389 -48581899 + MLT1B LTR MaLR 1 390 0 6939 182 23 16 chr10 97007389 97008401 -48580887 - L1MB3 LINE L1 -1358 4825 3821 2155 116 3 17 chr10 97008428 97008729 -48580559 - AluSx SINE Alu -15 297 1 657 246 68 14 chr10 97008729 97008936 -48580352 + L1MD2 LINE L1 5922 6139 -220 700 191 27 14 chr10 97008945 97009092 -48580196 + L1MD2 LINE L1 6195 6343 -16 408 296 128 0 chr10 97009270 97009442 -48579846 - MIR SINE MIR -44 218 25 1713 222 54 86 chr10 97011317 97011970 -48577318 + MER72 LTR ERV1 1 632 -90 1632 154 14 31 chr10 97011991 97012283 -48577005 + AluJb SINE Alu 9 295 -17 188 314 57 76 chr10 97012344 97012449 -48576839 - L2 LINE L2 -51 3221 3119 2240 195 86 25 chr10 97012728 97013204 -48576084 - MLT1D LTR MaLR 0 505 1 935 71 0 0 chr10 97013374 97013487 -48575801 - L1PA11 LINE L1 -2 6172 6060 4914 76 107 0 chr10 97013502 97014122 -48575166 + LTR12 LTR ERV1 1 686 -2 23476 91 10 5 chr10 97014124 97017246 -48572042 + HERV9 LTR ERV1 1 3139 -5260 6396 96 5 8 chr10 97017253 97018121 -48571167 + HERV9 LTR ERV1 4080 4944 -3455 1947 149 85 54 chr10 97018106 97018858 -48570430 + HERV17 LTR ERV1 745 1720 -5176 * 4865 92 0 2 chr10 97018852 97019497 -48569791 + HERV17 LTR ERV1 7756 8399 0 5458 88 122 0 chr10 97019497 97020233 -48569055 + LTR12 LTR ERV1 1 826 0 1370 92 25 0 chr10 97020233 97020429 -48568859 - L1PA11 LINE L1 -107 6067 5867 527 154 58 19 chr10 97020429 97020533 -48568755 - Charlie5 DNA MER1_type -258 2354 2247 26 0 0 0 chr10 97020539 97020565 -48568723 + AT_rich Low_complexity Low_complexity 1 26 0 231 289 0 0 chr10 97020565 97020617 -48568671 - Charlie5 DNA MER1_type -2559 53 2 589 172 6 112 chr10 97020638 97020748 -48568540 + MER96B DNA MER1_type? 24 111 -306 1786 147 0 69 chr10 97020748 97021068 -48568220 + AluJb SINE Alu 1 298 -14 589 172 6 112 chr10 97021068 97021126 -48568162 + MER96B DNA MER1_type? 111 174 -243 341 318 19 0 chr10 97021128 97021235 -48568053 + L2 LINE L2 3201 3309 -4 277 266 241 25 chr10 97021330 97021529 -48567759 + L1MC/D LINE L1 5491 5732 -2076 368 181 157 0 chr10 97021552 97021661 -48567627 + FLAM_C SINE Alu 20 141 0 409 304 118 14 chr10 97022947 97023167 -48566121 + MIR SINE MIR 17 259 -3 2189 86 0 7 chr10 97023216 97023507 -48565781 - AluSg SINE Alu -21 289 1 257 0 30 0 chr10 97023554 97023587 -48565701 + (CAA)n Simple_repeat Simple_repeat 3 36 0 21 0 0 0 chr10 97025989 97026010 -48563278 + AT_rich Low_complexity Low_complexity 1 21 0 282 286 0 0 chr10 97026026 97026089 -48563199 - MIR SINE MIR -6 256 194 25 83 0 0 chr10 97027468 97027528 -48561760 + AT_rich Low_complexity Low_complexity 1 60 0 245 237 40 53 chr10 97027850 97027926 -48561362 - MER5A DNA MER1_type -106 83 9 637 230 46 23 chr10 97027941 97028115 -48561173 - MER5B DNA MER1_type 0 178 1 301 342 128 7 chr10 97028809 97028958 -48560330 - MIR3 SINE MIR -12 196 30 1226 275 79 7 chr10 97029294 97029697 -48559591 + LTR16B LTR ERVL 1 432 -32 1795 176 3 13 chr10 97029837 97030139 -48559149 + AluSx SINE Alu 1 299 -13 1232 189 20 98 chr10 97030200 97030596 -48558692 - MLT1A1 LTR MaLR 0 365 1 729 324 28 4 chr10 97031496 97031746 -48557542 - MIR SINE MIR -4 258 3 227 196 0 36 chr10 97032234 97032247 -48557041 + G-rich Low_complexity Low_complexity 3 15 -41 581 117 0 0 chr10 97032247 97032341 -48556947 + L1MA8 LINE L1 6194 6287 -4 227 196 0 36 chr10 97032341 97032383 -48556905 + G-rich Low_complexity Low_complexity 15 56 0 266 305 29 19 chr10 97032740 97032845 -48556443 + GA-rich Low_complexity Low_complexity 2 107 0 660 276 59 71 chr10 97035010 97035347 -48553941 - L2 LINE L2 0 3313 2981 277 195 12 24 chr10 97036439 97036521 -48552767 + L1MC5 LINE L1 7827 7907 -54 26 50 0 0 chr10 97036681 97036721 -48552567 + AT_rich Low_complexity Low_complexity 1 40 0 359 234 129 48 chr10 97037315 97037439 -48551849 + MIR SINE MIR 115 248 -14 2249 102 0 0 chr10 97038277 97038570 -48550718 - AluY SINE Alu -18 293 1 218 250 0 18 chr10 97039636 97039692 -48549596 + MIR3 SINE MIR 154 208 0 203 323 0 0 chr10 97040814 97040876 -48548412 + MIR SINE MIR 201 262 0 487 254 73 40 chr10 97042055 97042232 -48547056 - MER5A DNA MER1_type 0 189 7 236 343 74 19 chr10 97042212 97042320 -48546968 + L2 LINE L2 3151 3264 -8 * 263 353 142 34 chr10 97042403 97042791 -48546497 + L2 LINE L2 2216 2645 -669 214 262 115 0 chr10 97043860 97043921 -48545367 + MIR SINE MIR 119 186 -76 826 45 36 0 chr10 97043954 97044066 -48545222 + MER30 DNA MER1_type 3 118 -112 585 97 18 26 chr10 97044069 97044182 -48545106 + (GAAA)n Simple_repeat Simple_repeat 2 113 0 675 177 16 0 chr10 97044182 97044306 -48544982 + MER30 DNA MER1_type 105 230 0 354 260 30 65 chr10 97044649 97044818 -48544470 - MIR SINE MIR -70 192 30 1374 190 47 7 chr10 97045425 97045725 -48543563 + MER58B DNA MER1_type 30 341 0 1988 132 16 22 chr10 97047063 97047374 -48541914 + AluJb SINE Alu 1 309 -3 444 243 28 0 chr10 97047506 97047613 -48541675 + MER81 DNA DNA 5 114 0 574 258 43 17 chr10 97048596 97048778 -48540510 - MIR3 SINE MIR -19 189 5 431 290 19 10 chr10 97051676 97051883 -48537405 + L1ME4a LINE L1 5718 5926 -195 36407 84 10 8 chr10 97051915 97058043 -48531245 + L1PA6 LINE L1 15 6154 0 183 156 0 0 chr10 97058177 97058209 -48531079 + (TG)n Simple_repeat Simple_repeat 1 32 0 4949 197 18 21 chr10 97058592 97058691 -48530597 + MER45B DNA AcHobo 1 99 -1482 2284 84 0 0 chr10 97058691 97058965 -48530323 - AluSq SINE Alu -19 294 21 4949 197 18 21 chr10 97058965 97059907 -48529381 + MER45B DNA AcHobo 99 1039 -1 415 250 125 0 chr10 97059959 97060095 -48529193 - LTR16A LTR ERVL -24 426 274 2053 162 29 6 chr10 97060679 97061019 -48528269 + MER7A DNA MER2_type 1 346 0 650 156 32 18 chr10 97061040 97061214 -48528074 - MER20 DNA MER1_type -1 218 1 189 74 0 0 chr10 97061280 97061307 -48527981 + (TCCC)n Simple_repeat Simple_repeat 4 30 0 1321 156 70 47 chr10 97061313 97061570 -48527718 - AluJb SINE Alu -38 274 12 462 350 102 40 chr10 97061786 97062209 -48527079 + L2 LINE L2 2804 3252 -20 212 162 0 0 chr10 97062219 97062256 -48527032 + GA-rich Low_complexity Low_complexity 3 39 0 275 316 11 11 chr10 97063007 97063102 -48526186 + MIR SINE MIR 51 145 -63 344 143 0 48 chr10 97063120 97063183 -48526105 - MLT1I LTR MaLR 0 409 350 336 233 7 25 chr10 97063406 97063550 -48525738 + MIR SINE MIR 64 262 0 4159 68 3 16 chr10 97063811 97064380 -48524908 - L1PA10 LINE L1 0 6168 5607 2377 88 3 3 chr10 97064382 97064875 -48524413 + L1PA10 LINE L1 5125 5617 -551 227 111 0 22 chr10 97066651 97066696 -48522592 + (TG)n Simple_repeat Simple_repeat 1 44 0 348 64 0 0 chr10 97066780 97066827 -48522461 + (TG)n Simple_repeat Simple_repeat 2 48 0 201 39 0 0 chr10 97066863 97066889 -48522399 + (CAAA)n Simple_repeat Simple_repeat 4 29 0 256 196 112 84 chr10 97066891 97066934 -48522354 + MIR3 SINE MIR 51 91 -117 2110 123 3 3 chr10 97066934 97067235 -48522053 + AluSq SINE Alu 1 301 -12 256 196 112 84 chr10 97067235 97067298 -48521990 + MIR3 SINE MIR 91 160 -48 2168 104 0 64 chr10 97067718 97068045 -48521243 + AluSx SINE Alu 1 306 -6 645 115 0 0 chr10 97068054 97068150 -48521138 - L1P4 LINE L1 -551 5617 5522 200 310 80 53 chr10 97068544 97068657 -48520631 + L2 LINE L2 2638 2753 -561 576 268 72 65 chr10 97070080 97070483 -48518805 + MLT1J LTR MaLR 56 461 -50 391 293 34 56 chr10 97070757 97071023 -48518265 + L1ME4a LINE L1 5002 5261 -885 480 206 0 39 chr10 97071030 97071132 -48518156 - L2 LINE L2 0 3313 3216 1598 238 63 30 chr10 97071133 97071641 -48517647 + MLT1E LTR MaLR 1 525 -68 369 260 178 62 chr10 97072972 97073326 -48515962 + MLT1L LTR MaLR 40 434 -181 483 267 68 7 chr10 97073327 97073473 -48515815 + MIR SINE MIR 48 202 -60 575 261 8 8 chr10 97073541 97073675 -48515613 - L2 LINE L2 0 3313 3180 375 245 90 20 chr10 97073826 97074026 -48515262 + Charlie8 DNA MER1_type 51 264 -2153 555 329 63 28 chr10 97074559 97074878 -48514410 + L1ME4a LINE L1 5556 5885 -236 275 322 56 7 chr10 97075559 97075702 -48513586 - MIR SINE MIR -42 220 71 1852 137 4 0 chr10 97076125 97076381 -48512907 + AluSx SINE Alu 1 257 -55 237 286 65 0 chr10 97076995 97077072 -48512216 + MIR3 SINE MIR 86 167 -41 3160 201 29 43 chr10 97078374 97079433 -48509855 - L1ME2 LINE L1 -2 6162 5119 1034 198 52 147 chr10 97079438 97079758 -48509530 + L1M4 LINE L1 4324 4673 -1473 2295 122 0 0 chr10 97079758 97080070 -48509218 - AluSx SINE Alu 0 312 1 1034 198 52 147 chr10 97080070 97080088 -48509200 + L1M4 LINE L1 4673 4691 -1455 1942 185 0 3 chr10 97080088 97080396 -48508892 - AluJb SINE Alu -5 307 1 1034 198 52 147 chr10 97080396 97080633 -48508655 + L1M4 LINE L1 4691 4845 -1301 383 229 77 29 chr10 97080634 97080804 -48508484 + L1M4 LINE L1 4935 5112 -1034 314 320 50 3 chr10 97082008 97082201 -48507087 - MIR SINE MIR 0 262 14 306 319 84 17 chr10 97082211 97082330 -48506958 + L2 LINE L2 3139 3265 -7 201 231 0 19 chr10 97083325 97083377 -48505911 + L2 LINE L2 3263 3313 0 309 336 16 16 chr10 97083736 97083861 -48505427 + L2 LINE L2 3143 3267 -5 2498 79 3 0 chr10 97084562 97084867 -48504421 + AluSp SINE Alu 3 308 -5 182 118 29 0 chr10 97085130 97085164 -48504124 + C-rich Low_complexity Low_complexity 3 37 0 468 272 18 0 chr10 97085365 97085479 -48503809 - LTR33 LTR ERVL -105 416 301 376 172 0 50 chr10 97085606 97085705 -48503583 - LTR33 LTR ERVL -414 107 14 273 184 149 23 chr10 97086332 97086419 -48502869 + MIR SINE MIR 65 162 -100 354 264 9 19 chr10 97086919 97087025 -48502263 + MIR SINE MIR 158 262 0 337 330 105 5 chr10 97087531 97087722 -48501566 + MIR SINE MIR 34 243 -19 315 105 0 0 chr10 97088921 97088978 -48500310 + (TG)n Simple_repeat Simple_repeat 2 58 0 240 111 0 0 chr10 97089510 97089546 -48499742 + (A)n Simple_repeat Simple_repeat 1 36 0 1769 161 3 13 chr10 97089774 97090073 -48499215 + AluJo SINE Alu 2 297 -15 1346 183 38 98 chr10 97090223 97090621 -48498667 - MLT1A2 LTR MaLR 0 374 1 1044 192 0 0 chr10 97090857 97091029 -48498259 + FAM SINE Alu 2 173 -2 379 281 9 18 chr10 97091061 97091175 -48498113 - MIR SINE MIR -1 261 149 * 397 195 24 140 chr10 97091169 97091280 -48498008 + MIR SINE MIR 5 93 -169 639 202 0 31 chr10 97091280 97091409 -48497879 + FLAM_A SINE Alu 2 126 -7 397 195 24 140 chr10 97091409 97091461 -48497827 + MIR SINE MIR 93 149 -113 293 238 177 33 chr10 97091478 97091659 -48497629 + MER46C DNA MER2_type 34 240 -98 235 299 46 23 chr10 97091723 97091810 -48497478 + MIR SINE MIR 174 262 0 522 276 41 28 chr10 97091821 97091966 -48497322 - MIR SINE MIR -108 154 8 987 164 72 19 chr10 97092393 97092601 -48496687 + MER20 DNA MER1_type 1 219 0 234 333 32 13 chr10 97092959 97093115 -48496173 - L2 LINE L2 -293 2979 2821 1017 206 0 11 chr10 97093692 97094000 -48495288 + AluJo SINE Alu 110 415 0 2126 127 0 43 chr10 97094539 97094789 -48494499 + L1P5 LINE L1 5420 5650 -506 2136 112 6 35 chr10 97094789 97095102 -48494186 + AluSx SINE Alu 1 304 -8 2126 127 0 43 chr10 97095102 97095222 -48494066 + L1P5 LINE L1 5650 5774 -382 352 351 53 16 chr10 97095463 97095651 -48493637 - MIR SINE MIR -50 212 18 * 363 253 96 27 chr10 97095642 97095788 -48493500 + MIR SINE MIR 107 262 0 266 312 97 19 chr10 97095976 97096130 -48493158 - L3 LINE CR1 -620 957 792 2246 116 0 3 chr10 97097090 97097428 -48491860 - AluSx SINE Alu 0 312 4 1153 203 33 78 chr10 97097547 97097882 -48491406 + MLT1A2 LTR MaLR 55 374 0 250 297 59 0 chr10 97097908 97098009 -48491279 + L2 LINE L2 2004 2110 -1204 296 268 94 63 chr10 97098063 97098190 -48491098 + MER5A DNA MER1_type 19 149 -40 257 348 90 11 chr10 97098195 97098373 -48490915 + L2 LINE L2 2198 2389 -925 25 65 0 0 chr10 97098642 97098688 -48490600 + AT_rich Low_complexity Low_complexity 1 46 0 410 274 38 13 chr10 97098872 97099029 -48490259 + L1ME4a LINE L1 5727 5887 -234 484 118 0 0 chr10 97099058 97099143 -48490145 - L1MB3 LINE L1 0 6899 6815 2435 234 70 29 chr10 97099153 97099970 -48489318 - MER21B LTR ERV1 -11 852 3 2801 152 22 0 chr10 97099983 97100478 -48488810 - L1MB3 LINE L1 -84 6815 6310 33080 97 10 31 chr10 97100496 97106781 -48482507 - L1PA7 LINE L1 0 6154 12 1709 101 4 32 chr10 97106787 97107035 -48482253 - AluY SINE Alu 0 311 71 301 255 170 7 chr10 97107038 97107191 -48482097 + L1ME4a LINE L1 5939 6116 -5 2193 112 16 3 chr10 97109766 97110071 -48479217 - AluSg SINE Alu -1 309 1 595 255 25 46 chr10 97110267 97110463 -48478825 - L2 LINE L2 -13 3300 3109 1340 163 0 0 chr10 97110484 97110680 -48478608 - AluSg/x SINE Alu -25 285 90 8544 202 11 13 chr10 97110680 97112728 -48476560 - L1MB3 LINE L1 -1254 5608 3565 1757 106 4 0 chr10 97112731 97112967 -48476321 - AluSp SINE Alu -76 237 1 26 0 0 0 chr10 97112973 97112999 -48476289 + AT_rich Low_complexity Low_complexity 1 26 0 2681 151 11 2 chr10 97113005 97113483 -48475805 - L1MB3 LINE L1 -4990 1873 1392 676 237 11 11 chr10 97113460 97113646 -48475642 - L1MB3 LINE L1 -6647 216 31 * 1383 172 31 92 chr10 97113886 97114212 -48475076 - AluJb SINE Alu -6 306 1 258 281 31 0 chr10 97114583 97114647 -48474641 + MIR SINE MIR 31 96 -112 937 149 65 51 chr10 97114990 97115204 -48474084 - L1MC2 LINE L1 -9 6335 6119 546 262 134 14 chr10 97115204 97115655 -48473633 - L1ME LINE L1 -720 5442 4951 726 258 72 13 chr10 97115685 97116003 -48473285 - HAL1 LINE L1 -1198 1309 973 270 282 28 0 chr10 97116182 97116253 -48473035 - HAL1 LINE L1 -1640 867 795 1131 186 9 27 chr10 97116297 97116518 -48472770 + Tigger5 DNA MER2_type 22 238 -2085 * 1323 145 17 0 chr10 97116508 97116743 -48472545 + Tigger5 DNA MER2_type 2085 2323 0 883 254 116 84 chr10 97116776 97116858 -48472430 - HAL1 LINE L1 -1815 692 614 225 0 0 0 chr10 97116858 97116883 -48472405 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 2070 94 3 18 chr10 97116888 97117174 -48472114 - AluSx SINE Alu -30 282 1 883 254 116 84 chr10 97117174 97117738 -48471550 - HAL1 LINE L1 -1896 611 19 429 319 89 20 chr10 97117755 97118003 -48471285 - L1MC2 LINE L1 -2021 5787 5523 198 277 36 60 chr10 97118554 97118637 -48470651 + MIR SINE MIR 19 99 -109 426 269 229 49 chr10 97118692 97118756 -48470532 - MLT1K LTR MaLR -10 578 527 1980 123 0 0 chr10 97118756 97119032 -48470256 + AluSp SINE Alu 38 313 0 426 269 229 49 chr10 97119032 97119399 -48469889 - MLT1K LTR MaLR -61 527 69 980 72 0 65 chr10 97119654 97119793 -48469495 - AluSp SINE Alu -183 130 1 22 0 0 0 chr10 97120709 97120731 -48468557 + AT_rich Low_complexity Low_complexity 1 22 0 212 98 0 24 chr10 97120835 97120876 -48468412 + (TTTTTG)n Simple_repeat Simple_repeat 2 41 0 2098 194 80 33 chr10 97121398 97121949 -48467339 + MER21B LTR ERV1 175 751 -112 1630 168 4 11 chr10 97122604 97122920 -48466368 + AluJb SINE Alu 6 319 0 423 281 62 31 chr10 97122942 97123166 -48466122 - MARNA DNA Mariner -207 379 149 424 202 0 11 chr10 97124004 97124093 -48465195 - L1PB4 LINE L1 -7 6149 6062 342 118 13 145 chr10 97124095 97124171 -48465117 - L1PA16 LINE L1 -319 5847 5782 25 0 0 0 chr10 97124198 97124223 -48465065 + AT_rich Low_complexity Low_complexity 1 25 0 1416 97 20 0 chr10 97124345 97124540 -48464748 + AluSg/x SINE Alu 100 298 -14 424 322 39 28 chr10 97124558 97124738 -48464550 - L2 LINE L2 -282 3031 2850 1269 200 98 41 chr10 97124880 97125428 -48463860 - LTR9B LTR ERV1 -32 580 4 338 297 62 105 chr10 97125477 97125800 -48463488 + L2 LINE L2 2964 3272 0 306 309 126 31 chr10 97125884 97126075 -48463213 - MIR SINE MIR -19 243 35 316 263 154 13 chr10 97126419 97126575 -48462713 + L1ME4a LINE L1 5914 6091 -30 766 168 0 29 chr10 97126596 97126733 -48462555 + FLAM_A SINE Alu 1 133 0 5184 162 34 24 chr10 97126748 97127338 -48461950 + L1MC1 LINE L1 5282 5888 -445 1913 102 0 0 chr10 97127338 97127592 -48461696 + AluSc SINE Alu 41 294 -15 5184 162 34 24 chr10 97127592 97128037 -48461251 + L1MC1 LINE L1 5888 6327 -6 753 71 193 21 chr10 97128370 97128510 -48460778 - MER4C LTR ERV1 0 465 302 1908 92 34 178 chr10 97128529 97129030 -48460258 - MER4A LTR ERV1 -233 431 3 368 338 32 7 chr10 97129337 97129491 -48459797 - MIR SINE MIR 0 262 105 413 335 99 0 chr10 97129574 97129735 -48459553 + MER91A DNA MER1_type 1 177 -19 59 27 0 0 chr10 97129986 97130059 -48459229 + AT_rich Low_complexity Low_complexity 1 73 0 1508 182 43 32 chr10 97130213 97130559 -48458729 + L1MB5 LINE L1 5801 6150 -24 57 28 0 0 chr10 97130679 97130750 -48458538 + AT_rich Low_complexity Low_complexity 1 71 0 700 83 0 0 chr10 97130898 97130982 -48458306 + AluSg SINE Alu 35 118 -192 228 256 51 39 chr10 97131457 97131535 -48457753 + MIR3 SINE MIR 82 160 -48 333 184 194 39 chr10 97131575 97131625 -48457663 + MER102a DNA MER1_type 32 73 -2344 1974 93 52 7 chr10 97131625 97132058 -48457230 + AluSg SINE Alu 1 445 0 333 184 194 39 chr10 97132058 97132109 -48457179 + MER102a DNA MER1_type 73 150 -2267 326 296 0 0 chr10 97132643 97132731 -48456557 + MER102a DNA MER1_type 221 308 -22 326 287 23 0 chr10 97132906 97132993 -48456295 + L2 LINE L2 3220 3308 -5 630 212 0 17 chr10 97133074 97133192 -48456096 - FLAM_A SINE Alu -11 131 16 301 217 19 47 chr10 97133351 97133457 -48455831 - L1MC4 LINE L1 -1326 6716 6614 582 159 0 0 chr10 97133459 97133566 -48455722 + (TA)n Simple_repeat Simple_repeat 1 107 0 228 173 0 0 chr10 97133567 97133619 -48455669 - L1MC4 LINE L1 -1339 6703 6652 185 329 12 24 chr10 97133813 97133895 -48455393 - L2 LINE L2 -30 3283 3203 275 215 285 28 chr10 97134028 97134195 -48455093 - MIR SINE MIR -13 249 39 195 114 0 0 chr10 97134262 97134297 -48454991 + (TCTA)n Simple_repeat Simple_repeat 2 36 0 4098 154 66 96 chr10 97134304 97135244 -48454044 + MER21A LTR ERV1 18 929 -2 209 327 33 40 chr10 97135572 97135722 -48453566 - L2 LINE L2 -92 3221 3073 2005 115 0 0 chr10 97135728 97135998 -48453290 + AluSx SINE Alu 1 270 -42 2373 84 7 0 chr10 97136221 97136519 -48452769 - AluSx SINE Alu -12 300 1 1692 159 43 45 chr10 97137023 97137085 -48452203 - L1MB7 LINE L1 -19 6165 6104 2433 59 0 10 chr10 97137085 97137391 -48451897 - AluY SINE Alu -8 303 1 1692 159 43 45 chr10 97137391 97137680 -48451608 - L1MB7 LINE L1 -80 6104 5815 1902 118 4 32 chr10 97137807 97138087 -48451201 + AluSx SINE Alu 28 299 -13 180 302 0 0 chr10 97138488 97138541 -48450747 + L2 LINE L2 3002 3054 -218 201 192 0 19 chr10 97138808 97138860 -48450428 + (TTAA)n Simple_repeat Simple_repeat 4 54 0 210 111 22 22 chr10 97139807 97139852 -48449436 + T-rich Low_complexity Low_complexity 2 46 0 460 263 26 18 chr10 97139999 97140113 -48449175 + L2 LINE L2 3199 3313 0 32 26 0 0 chr10 97140388 97140427 -48448861 + AT_rich Low_complexity Low_complexity 1 39 0 425 322 34 27 chr10 97140621 97140770 -48448518 + MIR3 SINE MIR 34 183 -25 1734 137 0 67 chr10 97141198 97141513 -48447775 + AluJb SINE Alu 1 294 -18 369 269 132 18 chr10 97142986 97143153 -48446135 + MIR SINE MIR 8 193 -69 373 232 236 7 chr10 97143343 97143483 -48445805 + MER5A DNA MER1_type 7 167 -11 1850 81 0 4 chr10 97143523 97143757 -48445531 - AluSg SINE Alu -25 285 53 881 168 0 76 chr10 97143824 97144009 -48445279 - FRAM SINE Alu 0 40 1 993 161 0 6 chr10 97144890 97145051 -48444237 - AluJb SINE Alu -28 284 125 1544 172 17 44 chr10 97145278 97145574 -48443714 - AluJo SINE Alu -19 293 6 2374 102 0 0 chr10 97145583 97145888 -48443400 - AluSx SINE Alu -3 309 5 24 0 0 0 chr10 97146002 97146026 -48443262 + AT_rich Low_complexity Low_complexity 1 24 0 2184 110 3 13 chr10 97147847 97148157 -48441131 - AluSx SINE Alu -5 307 1 197 238 0 0 chr10 97148307 97148349 -48440939 - L2 LINE L2 -14 3258 3217 268 321 45 54 chr10 97148546 97148882 -48440406 - L2 LINE L2 -327 2986 2657 22 0 0 0 chr10 97148933 97148955 -48440333 + AT_rich Low_complexity Low_complexity 1 22 0 210 37 0 0 chr10 97149429 97149456 -48439832 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 467 350 58 18 chr10 97149471 97149865 -48439423 - L2 LINE L2 -1199 2115 1706 208 204 37 19 chr10 97149865 97149919 -48439369 + CT-rich Low_complexity Low_complexity 2 56 0 701 289 45 0 chr10 97150195 97150396 -48438892 - MIR SINE MIR 0 262 53 233 330 38 87 chr10 97150678 97151048 -48438240 - L2 LINE L2 -2257 1057 706 192 77 0 0 chr10 97151367 97151393 -48437895 + (TCC)n Simple_repeat Simple_repeat 1 26 0 236 291 33 113 chr10 97151924 97152075 -48437213 + MIR3 SINE MIR 32 170 -38 182 209 47 0 chr10 97152138 97152181 -48437107 - L2 LINE L2 -18 3254 3210 198 0 0 0 chr10 97152350 97152372 -48436916 + (T)n Simple_repeat Simple_repeat 1 22 0 228 291 55 30 chr10 97152734 97152899 -48436389 - L1ME LINE L1 -390 5731 5563 2409 82 0 0 chr10 97152969 97153260 -48436028 - AluSg SINE Alu -19 291 1 1053 194 24 0 chr10 97153704 97153910 -48435378 - L1PA16 LINE L1 0 6166 5956 312 295 67 19 chr10 97154368 97154473 -48434815 - MIR SINE MIR -78 130 21 252 289 105 13 chr10 97155002 97155078 -48434210 + MIR SINE MIR 26 108 -100 1646 159 24 17 chr10 97155482 97155777 -48433511 + AluJo SINE Alu 1 297 -15 1845 186 0 7 chr10 97155843 97156150 -48433138 - AluJo SINE Alu -5 307 3 318 237 13 26 chr10 97156857 97156933 -48432355 - L2 LINE L2 -49 3264 3190 2237 110 0 10 chr10 97157943 97158281 -48431007 - AluSx SINE Alu 0 312 4 1284 202 30 72 chr10 97158386 97158735 -48430553 + MLT1A2 LTR MaLR 39 374 0 251 297 59 0 chr10 97158761 97158862 -48430426 + L2 LINE L2 2004 2110 -1204 294 268 94 63 chr10 97158916 97159043 -48430245 + MER5A DNA MER1_type 19 149 -40 242 322 101 13 chr10 97159077 97159226 -48430062 + L2 LINE L2 2228 2389 -925 25 65 0 0 chr10 97159495 97159541 -48429747 + AT_rich Low_complexity Low_complexity 1 46 0 483 277 38 13 chr10 97159723 97159882 -48429406 + L1ME4a LINE L1 5725 5887 -234 529 118 0 0 chr10 97159911 97159996 -48429292 - L1MB3 LINE L1 0 6183 6099 2751 233 70 29 chr10 97160006 97160823 -48428465 - MER21B LTR ERV1 -11 852 3 3046 152 22 0 chr10 97160836 97161331 -48427957 - L1MB3 LINE L1 -84 6099 5594 7634 101 38 3 chr10 97161349 97163222 -48426066 - L1PA7 LINE L1 0 6154 4255 1354 264 131 25 chr10 97163252 97163741 -48425547 - MLT1H LTR MaLR -8 541 1 275 267 50 20 chr10 97163741 97163842 -48425446 + MIR SINE MIR 36 139 -123 28 48 0 0 chr10 97163952 97163994 -48425294 + AT_rich Low_complexity Low_complexity 1 42 0 200 250 16 47 chr10 97164555 97164619 -48424669 - L2 LINE L2 -61 3252 3191 592 265 22 112 chr10 97164650 97164714 -48424574 - MIR SINE MIR -8 254 186 1767 169 7 20 chr10 97164714 97165010 -48424278 - AluJb SINE Alu -20 292 1 592 265 22 112 chr10 97165010 97165213 -48424075 - MIR SINE MIR -76 186 11 31 26 0 0 chr10 97165259 97165297 -48423991 + AT_rich Low_complexity Low_complexity 1 38 0 198 366 7 26 chr10 97165482 97165635 -48423653 - L2 LINE L2 -237 3035 2886 2003 160 0 3 chr10 97165953 97166265 -48423023 + AluSx SINE Alu 1 311 -1 21 36 0 0 chr10 97166613 97166641 -48422647 + AT_rich Low_complexity Low_complexity 1 28 0 830 225 41 0 chr10 97166729 97166898 -48422390 + MER20 DNA MER1_type 36 211 -8 1722 160 38 7 chr10 97166946 97167239 -48422049 - AluJo SINE Alu -6 306 5 208 306 8 97 chr10 97167278 97167331 -48421957 - MIR SINE MIR -121 141 85 2355 92 0 16 chr10 97167331 97167647 -48421641 + AluY SINE Alu 1 311 0 208 306 8 97 chr10 97167647 97167727 -48421561 - MIR SINE MIR -177 85 20 1748 185 0 6 chr10 97168158 97168472 -48420816 + AluJo SINE Alu 1 312 0 1278 128 5 10 chr10 97168589 97168792 -48420496 + AluSq SINE Alu 105 306 -7 2528 113 11 8 chr10 97168832 97169186 -48420102 - THE1A LTR MaLR 0 355 1 1984 145 0 3 chr10 97169258 97169561 -48419727 - AluSx SINE Alu 0 302 1 916 281 167 53 chr10 97169706 97170190 -48419098 - L2 LINE L2 -1 3271 2653 2224 91 0 0 chr10 97170190 97170476 -48418812 - AluSg SINE Alu -18 292 7 916 281 167 53 chr10 97170476 97170739 -48418549 - L2 LINE L2 -619 2653 2421 212 283 50 0 chr10 97170868 97170928 -48418360 - MER5A DNA MER1_type -3 186 124 2186 107 3 0 chr10 97171897 97172186 -48417102 - AluSx SINE Alu -22 290 1 198 319 248 0 chr10 97172304 97172530 -48416758 + L2 LINE L2 2242 2523 -791 1886 106 109 0 chr10 97172732 97173006 -48416282 - AluSx SINE Alu -8 304 1 283 275 0 0 chr10 97173611 97173680 -48415608 + MLT1F1 LTR MaLR 57 125 -442 3081 166 44 0 chr10 97173680 97174252 -48415036 + L1MC3 LINE L1 7189 7785 0 466 236 6 155 chr10 97174879 97175072 -48414216 + MER5B DNA MER1_type 1 175 -14 210 317 0 0 chr10 97175292 97175352 -48413936 + L2 LINE L2 3251 3310 -3 308 229 66 0 chr10 97175426 97175487 -48413801 - L2 LINE L2 -2 3270 3206 2369 130 0 32 chr10 97177660 97178007 -48411281 + MER1B DNA MER1_type 1 336 -1 1422 188 20 40 chr10 97178237 97178535 -48410753 + AluJo SINE Alu 1 292 -20 811 171 0 8 chr10 97178573 97178690 -48410598 + FLAM_A SINE Alu 11 126 -16 333 343 30 12 chr10 97179285 97179454 -48409834 - MER5A DNA MER1_type -10 179 8 1846 104 47 54 chr10 97179792 97180090 -48409198 - AluSx SINE Alu -16 296 1 1150 171 73 5 chr10 97180359 97180564 -48408724 + AluJo SINE Alu 38 256 -56 2183 129 0 6 chr10 97180802 97181113 -48408175 - AluSx SINE Alu -3 309 1 227 314 14 0 chr10 97181373 97181443 -48407845 + MIR SINE MIR 83 153 -109 222 105 0 0 chr10 97181586 97181624 -48407664 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 2155 97 0 3 chr10 97181629 97181918 -48407370 - AluY SINE Alu -21 290 3 283 145 0 132 chr10 97181969 97182045 -48407243 - L3 LINE CR1 -7 1570 1505 2316 63 33 13 chr10 97182520 97182821 -48406467 - AluY SINE Alu -3 308 2 22 88 0 0 chr10 97183660 97183717 -48405571 + AT_rich Low_complexity Low_complexity 1 57 0 13024 140 52 1 chr10 97184338 97186613 -48402675 - Tigger1 DNA MER2_type -1 2417 26 2747 199 49 9 chr10 97186621 97187254 -48402034 - L1MB8 LINE L1 -22 6156 5499 505 250 59 55 chr10 97187252 97187472 -48401816 + HAL1 LINE L1 1531 1751 -756 * 234 226 65 0 chr10 97187479 97187541 -48401747 + HAL1 LINE L1 2431 2496 -11 23 33 0 0 chr10 97187541 97187571 -48401717 + AT_rich Low_complexity Low_complexity 1 30 0 353 311 50 54 chr10 97188260 97188482 -48400806 + L2 LINE L2 3077 3297 -16 277 356 68 4 chr10 97188905 97189204 -48400084 + L2 LINE L2 2728 3048 -224 564 285 170 43 chr10 97189224 97189653 -48399635 + L2 LINE L2 2758 3244 -69 329 266 168 6 chr10 97189909 97189964 -48399324 - MER46C DNA MER2_type -4 334 289 180 0 0 0 chr10 97189964 97189984 -48399304 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 2215 78 21 0 chr10 97189986 97190268 -48399020 - AluY SINE Alu -23 288 1 329 266 168 6 chr10 97190268 97190382 -48398906 - MER46C DNA MER2_type -49 289 134 26 30 0 0 chr10 97190551 97190584 -48398704 + AT_rich Low_complexity Low_complexity 1 33 0 307 312 211 10 chr10 97190589 97190788 -48398500 - MIR SINE MIR -5 257 19 21 0 0 0 chr10 97191829 97191850 -48397438 + AT_rich Low_complexity Low_complexity 1 21 0 216 229 21 0 chr10 97193195 97193243 -48396045 + MIR SINE MIR 183 231 -31 1806 128 63 68 chr10 97193575 97193942 -48395346 - MLT1A1 LTR MaLR 0 365 1 185 0 0 39 chr10 97194047 97194073 -48395215 + (CTG)n Simple_repeat Simple_repeat 2 26 0 676 266 45 0 chr10 97194074 97194251 -48395037 - MIR SINE MIR -11 251 67 235 163 0 0 chr10 97194783 97194826 -48394462 - MER53 DNA DNA -146 43 1 2251 83 28 0 chr10 97195403 97195693 -48393595 + AluSx SINE Alu 1 298 -14 701 153 71 0 chr10 97196355 97196525 -48392763 - L1MA7 LINE L1 -2 6289 6108 2482 133 44 22 chr10 97196527 97196984 -48392304 - L1MA7 LINE L1 -283 6008 5542 214 245 57 0 chr10 97197780 97197833 -48391455 - L2 LINE L2 -49 3223 3168 22 35 0 0 chr10 97198305 97198334 -48390954 + AT_rich Low_complexity Low_complexity 1 29 0 246 128 0 0 chr10 97198583 97198622 -48390666 + (A)n Simple_repeat Simple_repeat 1 39 0 810 259 78 60 chr10 97198914 97199365 -48389923 + L1MC4a LINE L1 5435 5893 -1915 256 234 4 138 chr10 97199368 97199607 -48389681 + L1MC5 LINE L1 7711 7917 -44 262 94 22 8 chr10 97199644 97199700 -48389588 + L1MB8 LINE L1 6129 6184 0 497 237 66 0 chr10 97200880 97201032 -48388256 + L1ME3A LINE L1 6002 6163 -7 182 238 71 83 chr10 97202782 97202866 -48386422 + MIR SINE MIR 63 145 -117 2136 131 0 13 chr10 97203723 97204028 -48385260 + AluSx SINE Alu 1 301 -11 2090 135 10 0 chr10 97204092 97204389 -48384899 + AluSx SINE Alu 1 300 -12 399 165 0 0 chr10 97204389 97204474 -48384814 + (TA)n Simple_repeat Simple_repeat 2 86 0 558 212 181 52 chr10 97206583 97206776 -48382512 - MER20 DNA MER1_type 0 219 2 277 272 0 43 chr10 97206845 97206937 -48382351 - MIR3 SINE MIR -15 193 106 1131 241 86 38 chr10 97208313 97208757 -48380531 + MLT1C LTR MaLR 1 465 -2 613 276 122 19 chr10 97208922 97209136 -48380152 + MIR SINE MIR 24 259 -3 323 295 218 0 chr10 97209442 97209598 -48379690 - MIR SINE MIR -1 261 72 1432 212 6 35 chr10 97209751 97210067 -48379221 + AluJb SINE Alu 5 311 -1 681 250 75 71 chr10 97211230 97211538 -48377750 - MER102b DNA MER1_type 0 341 33 890 234 30 5 chr10 97211681 97211882 -48377406 + MER63A DNA MER1_type 5 210 0 198 302 31 42 chr10 97212066 97212162 -48377126 - MIR SINE MIR -98 164 70 511 110 12 24 chr10 97212257 97212339 -48376949 - MER5A DNA MER1_type 0 189 109 13427 124 22 38 chr10 97212845 97212968 -48376320 - Tigger1 DNA MER2_type 0 2418 2295 2198 103 7 7 chr10 97212968 97213268 -48376020 + AluSx SINE Alu 4 303 -9 13427 124 22 38 chr10 97213268 97213317 -48375971 - Tigger1 DNA MER2_type -123 2295 2247 2231 94 0 3 chr10 97213317 97213605 -48375683 - AluY SINE Alu -24 287 1 13427 124 22 38 chr10 97213605 97215076 -48374212 - Tigger1 DNA MER2_type -171 2247 823 2019 156 0 0 chr10 97215076 97215378 -48373910 - AluJb SINE Alu -10 302 1 13427 124 22 38 chr10 97215378 97216142 -48373146 - Tigger1 DNA MER2_type -1595 823 48 2342 80 0 0 chr10 97216585 97216885 -48372403 - AluY SINE Alu -11 300 1 182 239 0 15 chr10 97216899 97216966 -48372322 + GA-rich Low_complexity Low_complexity 3 68 0 529 224 178 106 chr10 97217434 97217627 -48371661 + L2 LINE L2 2927 3154 -159 2043 125 4 0 chr10 97217627 97217907 -48371381 - AluSx SINE Alu -20 292 12 529 224 178 106 chr10 97217907 97218034 -48371254 + L2 LINE L2 3154 3270 -43 318 287 91 35 chr10 97218593 97218736 -48370552 + MIR3 SINE MIR 37 187 -21 340 296 28 9 chr10 97218736 97218844 -48370444 - MIR3 SINE MIR -52 156 47 673 171 165 24 chr10 97220005 97220169 -48369119 - MIR SINE MIR -1 261 75 452 319 66 0 chr10 97221314 97221480 -48367808 + MER5B DNA MER1_type 1 177 -1 337 333 65 21 chr10 97222389 97222575 -48366713 + MIR3 SINE MIR 4 197 -11 236 266 62 109 chr10 97222787 97223062 -48366226 + L1ME LINE L1 5558 5819 -302 2030 130 3 7 chr10 97223070 97223363 -48365925 + AluJb SINE Alu 1 292 -20 314 123 18 0 chr10 97223476 97223533 -48365755 + GA-rich Low_complexity Low_complexity 4 61 0 562 119 60 0 chr10 97224146 97224230 -48365058 - AluJb SINE Alu -201 111 23 354 262 104 6 chr10 97224839 97225003 -48364285 + L1MC/D LINE L1 5637 5816 -1992 820 200 13 13 chr10 97225046 97225196 -48364092 + FAM SINE Alu 20 169 -16 2125 109 0 0 chr10 97225198 97225482 -48363806 + AluSg SINE Alu 4 287 -23 493 194 2 0 chr10 97225638 97225778 -48363510 + MLT1I LTR MaLR 290 407 -2 1000 270 42 54 chr10 97227128 97227535 -48361753 + MLT1I LTR MaLR 8 409 0 5138 163 35 32 chr10 97228418 97229486 -48359802 + MER11C LTR ERVK 1 1071 0 2304 100 3 3 chr10 97229574 97229873 -48359415 + AluSp SINE Alu 1 299 -14 386 247 68 26 chr10 97229997 97230130 -48359158 - MIR3 SINE MIR -3 205 63 334 227 23 11 chr10 97230132 97230220 -48359068 + MLT1K LTR MaLR 493 581 -7 224 306 36 45 chr10 97230234 97230268 -48359020 + MIR3 SINE MIR 93 126 -82 2057 143 0 10 chr10 97230268 97230568 -48358720 - AluSx SINE Alu -15 297 1 224 306 36 45 chr10 97230568 97230644 -48358644 + MIR3 SINE MIR 126 202 -6 669 266 110 81 chr10 97230902 97231108 -48358180 + L1ME4a LINE L1 5480 5679 -442 2259 94 0 10 chr10 97231108 97231406 -48357882 + AluY SINE Alu 1 295 -16 669 266 110 81 chr10 97231406 97231766 -48357522 + L1ME4a LINE L1 5679 6068 -53 2257 103 3 10 chr10 97231766 97232078 -48357210 - AluY SINE Alu -1 310 1 669 266 110 81 chr10 97232078 97232127 -48357161 + L1ME4a LINE L1 6068 6114 -7 1244 157 60 20 chr10 97232774 97233023 -48356265 - ORSL DNA AcHobo 0 275 17 371 259 50 39 chr10 97233245 97233415 -48355873 - MER5A DNA MER1_type -3 186 2 1784 161 10 13 chr10 97233459 97233757 -48355531 - AluJb SINE Alu -15 297 1 2367 74 0 0 chr10 97234860 97235145 -48354143 - AluY SINE Alu -11 300 16 1080 221 65 21 chr10 97235723 97236048 -48353240 - MER2 DNA MER2_type 0 345 7 271 259 167 19 chr10 97236067 97236175 -48353113 - L2 LINE L2 0 3313 3190 3897 175 38 23 chr10 97236447 97237243 -48352045 + L1MB8 LINE L1 5356 6163 -15 24 0 0 0 chr10 97237651 97237675 -48351613 + AT_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr10 97237889 97237917 -48351371 + AT_rich Low_complexity Low_complexity 1 28 0 634 221 48 0 chr10 97238868 97239013 -48350275 - MIR SINE MIR -1 261 110 2426 73 0 0 chr10 97239048 97239348 -48349940 - AluY SINE Alu -11 300 1 705 228 0 0 chr10 97239442 97239565 -48349723 + FLAM_A SINE Alu 1 123 -10 189 0 0 0 chr10 97240513 97240534 -48348754 + (TG)n Simple_repeat Simple_repeat 2 22 0 473 187 26 27 chr10 97240537 97240722 -48348566 + L1MC5 LINE L1 7687 7908 -53 860 229 34 34 chr10 97241615 97241820 -48347468 + MER63A DNA MER1_type 6 210 0 180 315 198 9 chr10 97242352 97242463 -48346825 - L3 LINE CR1 -4 1573 1442 469 240 140 0 chr10 97242544 97242694 -48346594 + L3 LINE CR1 1218 1388 -189 210 100 0 0 chr10 97242704 97242734 -48346554 - MIR SINE MIR 0 262 233 250 259 0 0 chr10 97242736 97242790 -48346498 - L3 LINE CR1 -606 971 918 1817 193 105 14 chr10 97243753 97244116 -48345172 - MSTD LTR MaLR 0 396 1 3254 216 37 28 chr10 97244121 97244870 -48344418 - MSTD-int LTR MaLR -6 1729 974 615 130 65 9 chr10 97244870 97245009 -48344279 - AluY SINE Alu 0 326 182 2308 84 0 0 chr10 97245017 97245304 -48343984 - AluY SINE Alu -24 287 1 398 281 30 55 chr10 97245305 97245421 -48343867 - MSTD-int LTR MaLR -726 925 813 2378 55 10 0 chr10 97245421 97245711 -48343577 - AluY SINE Alu -18 293 1 398 281 30 55 chr10 97245711 97245758 -48343530 - MSTD-int LTR MaLR -838 813 766 4888 115 34 12 chr10 97245846 97246619 -48342669 - Tigger3(Golem) DNA MER2_type 0 3029 2240 1258 198 26 0 chr10 97246612 97246844 -48342444 - Tigger3(Golem) DNA MER2_type -2791 238 1 * 3702 201 38 27 chr10 97246853 97247619 -48341669 - MSTD-int LTR MaLR -960 775 2 1957 183 103 3 chr10 97247621 97247981 -48341307 - MSTD LTR MaLR 0 396 1 384 330 110 11 chr10 97247996 97248187 -48341101 - MIR SINE MIR -14 248 39 544 227 37 7 chr10 97248295 97248439 -48340849 + MIR SINE MIR 114 262 0 273 29 0 0 chr10 97248946 97248980 -48340308 + (CA)n Simple_repeat Simple_repeat 2 35 0 1400 64 0 0 chr10 97250126 97250340 -48338948 + AluY SINE Alu 123 311 0 257 299 149 30 chr10 97250441 97250575 -48338713 - MIR3 SINE MIR -11 197 48 307 302 140 78 chr10 97253025 97253836 -48335452 + L1M2 LINE L1 528 1235 -5614 208 329 57 14 chr10 97254473 97254543 -48334745 + MIR SINE MIR 2 74 -188 238 211 158 26 chr10 97254681 97254757 -48334531 + MIR SINE MIR 158 243 -19 225 278 166 53 chr10 97255013 97255164 -48334124 - MIR3 SINE MIR -6 202 35 207 281 98 0 chr10 97255486 97255568 -48333720 + MIR SINE MIR 113 202 -60 398 100 129 0 chr10 97255569 97255639 -48333649 + LTR24 LTR ERV1 2 80 -387 996 171 6 6 chr10 97255651 97255815 -48333473 - FRAM SINE Alu -11 165 2 2103 151 56 0 chr10 97255818 97256156 -48333132 + LTR24 LTR ERV1 111 467 0 232 286 143 0 chr10 97256198 97256282 -48333006 + L2 LINE L2 3116 3211 -61 1603 88 79 9 chr10 97256325 97256540 -48332748 - MER30 DNA MER1_type 0 230 1 436 227 78 23 chr10 97257061 97257189 -48332099 - L2 LINE L2 0 3313 3179 369 196 56 19 chr10 97257243 97257350 -48331938 - L1ME3A LINE L1 0 6170 6060 31 0 0 0 chr10 97257430 97257461 -48331827 + AT_rich Low_complexity Low_complexity 1 31 0 494 349 67 45 chr10 97257581 97257868 -48331420 - L2 LINE L2 -162 3110 2831 4270 131 68 33 chr10 97257868 97258570 -48330718 - LTR8A LTR ERV1 0 727 1 494 349 67 45 chr10 97258570 97258954 -48330334 - L2 LINE L2 -441 2831 2418 196 352 0 0 chr10 97259325 97259396 -48329892 + L2 LINE L2 3201 3271 -1 213 132 0 26 chr10 97259407 97259445 -48329843 - MIR SINE MIR -60 148 112 354 156 211 33 chr10 97259593 97259662 -48329626 + MLT1L LTR MaLR 185 275 -340 6029 115 27 7 chr10 97259662 97260517 -48328771 - MER4D LTR ERV1 0 872 1 354 156 211 33 chr10 97260517 97260537 -48328751 + MLT1L LTR MaLR 275 290 -325 184 306 61 0 chr10 97261078 97261127 -48328161 - L2 LINE L2 -55 3258 3207 198 309 0 53 chr10 97261264 97261358 -48327930 - L2 LINE L2 -226 3046 2958 3558 152 42 7 chr10 97261533 97262130 -48327158 - LTR35 LTR ERV1 0 618 1 711 277 26 30 chr10 97262505 97262736 -48326552 - MIR SINE MIR -1 261 32 264 224 45 15 chr10 97262755 97262822 -48326466 + MER21B LTR ERV1 14 82 -781 619 221 19 39 chr10 97262881 97263035 -48326253 + MER21B LTR ERV1 98 248 -615 1989 184 147 49 chr10 97263065 97263135 -48326153 + MER21B LTR ERV1 329 391 -472 2696 117 58 19 chr10 97263135 97263547 -48325741 - MSTA LTR MaLR 0 428 1 1989 184 147 49 chr10 97263547 97263705 -48325583 + MER21B LTR ERV1 391 532 -331 1842 135 241 11 chr10 97263705 97264053 -48325235 + MSTA LTR MaLR 1 428 0 10115 142 22 15 chr10 97264055 97265622 -48323666 + MSTA-int LTR MaLR 3 1580 0 1203 153 192 69 chr10 97265622 97265956 -48323332 + MSTA LTR MaLR 1 375 0 1989 184 147 49 chr10 97265956 97266190 -48323098 + MER21B LTR ERV1 531 842 -21 2337 156 11 0 chr10 97266476 97266835 -48322453 + MER47A DNA MER2_type 4 366 0 2358 228 98 3 chr10 97267097 97267840 -48321448 - MER21B LTR ERV1 -1 862 2 241 247 24 59 chr10 97268248 97268333 -48320955 - LTR67 LTR ERVL -380 177 96 237 304 18 0 chr10 97268450 97268506 -48320782 - MER81 DNA DNA -57 57 1 229 287 29 92 chr10 97268597 97268737 -48320551 + MIR SINE MIR 5 133 -129 828 232 24 29 chr10 97268737 97268944 -48320344 + MER3 DNA MER1_type 1 206 -3 229 287 29 92 chr10 97268944 97268977 -48320311 + MIR SINE MIR 133 167 -95 279 260 101 41 chr10 97269050 97269219 -48320069 - L2 LINE L2 -103 3210 3032 251 244 33 44 chr10 97269266 97269356 -48319932 + MLT1L LTR MaLR 201 289 -326 3005 179 63 95 chr10 97269366 97269555 -48319733 + L1MC5 LINE L1 6863 7057 -904 2173 121 3 0 chr10 97269555 97269845 -48319443 + AluSp SINE Alu 1 291 -22 3005 179 63 95 chr10 97269845 97270480 -48318808 + L1MC5 LINE L1 7057 7636 -325 2104 110 14 3 chr10 97270480 97270772 -48318516 - AluSx SINE Alu -12 300 6 3005 179 63 95 chr10 97270772 97271059 -48318229 + L1MC5 LINE L1 7636 7931 -30 524 250 77 72 chr10 97271100 97271158 -48318130 + MLT1J LTR MaLR 326 382 -129 1784 175 132 3 chr10 97271158 97271506 -48317782 + MSTD LTR MaLR 4 396 0 524 250 77 72 chr10 97271506 97271697 -48317591 + MLT1J LTR MaLR 382 509 -2 806 319 86 19 chr10 97271784 97272360 -48316928 - L2 LINE L2 -412 2902 2209 855 132 73 0 chr10 97272423 97272559 -48316729 - FRAM SINE Alu -13 163 18 528 309 27 21 chr10 97272593 97272781 -48316507 - MIR SINE MIR -70 192 4 488 258 73 0 chr10 97273057 97273181 -48316107 - MLT1G LTR MaLR -41 549 417 1811 185 69 14 chr10 97273221 97273567 -48315721 + MLT1A1 LTR MaLR 1 365 0 456 283 94 33 chr10 97273622 97273815 -48315473 - MLT1J2 LTR MaLR -174 421 203 222 37 0 0 chr10 97274299 97274326 -48314962 + (GA)n Simple_repeat Simple_repeat 1 27 0 979 230 31 50 chr10 97274384 97274645 -48314643 + MIR SINE MIR 5 260 -2 418 325 104 48 chr10 97274641 97275290 -48313998 - L2 LINE L2 0 3272 2565 * 260 122 0 0 chr10 97275407 97275448 -48313840 + L1ME1 LINE L1 5847 5887 -234 3114 151 23 6 chr10 97275686 97276209 -48313079 - L1MB8 LINE L1 -4 6174 5643 631 176 113 14 chr10 97276230 97276372 -48312916 + L1ME1 LINE L1 6007 6162 -4 336 277 54 54 chr10 97276529 97276659 -48312629 - MIR SINE MIR -76 186 57 276 259 146 112 chr10 97276990 97277195 -48312093 + LTR33A LTR ERVL 2 213 -310 524 189 254 16 chr10 97277255 97277440 -48311848 + LTR33A LTR ERVL 293 521 -2 2879 120 42 0 chr10 97277469 97277878 -48311410 - MSTA LTR MaLR -2 426 1 1087 232 41 0 chr10 97278261 97278481 -48310807 - MLT1J2 LTR MaLR -221 229 1 1229 237 98 31 chr10 97279733 97280150 -48309138 - MLT1J1 LTR MaLR -1 445 1 235 180 0 20 chr10 97280644 97280694 -48308594 + T-rich Low_complexity Low_complexity 6 54 0 616 279 108 59 chr10 97280908 97281255 -48308033 - L1ME3A LINE L1 -215 5949 5580 2219 109 0 3 chr10 97281255 97281548 -48307740 + AluSg SINE Alu 2 293 -17 616 279 108 59 chr10 97281548 97281590 -48307698 - L1ME3A LINE L1 -584 5580 5541 235 289 43 19 chr10 97281911 97282028 -48307260 + MIR SINE MIR 10 130 -78 2189 129 0 0 chr10 97282030 97282329 -48306959 - AluSx SINE Alu -13 299 5 894 108 9 0 chr10 97282327 97282463 -48306825 - AluSq/x SINE Alu -178 135 1 873 260 9 18 chr10 97282573 97282796 -48306492 - MIR SINE MIR -10 252 32 370 176 244 25 chr10 97282815 97282934 -48306354 + MLT1F LTR MaLR 374 518 -24 1251 155 10 5 chr10 97282946 97283153 -48306135 - AluJo SINE Alu -21 291 84 246 186 0 0 chr10 97283154 97283197 -48306091 + MLT1F LTR MaLR 491 533 -9 1154 188 94 85 chr10 97283276 97283805 -48305483 + MER34B LTR ERV1 12 560 -5 731 77 0 0 chr10 97283825 97283929 -48305359 - AluY SINE Alu 0 311 208 405 200 174 26 chr10 97283966 97284081 -48305207 + MIR SINE MIR 27 158 -104 412 200 86 0 chr10 97284152 97284257 -48305031 + LTR37A LTR ERV1 54 167 -259 580 216 0 16 chr10 97284258 97284383 -48304905 + FLAM_A SINE Alu 8 130 -12 560 233 83 21 chr10 97284433 97284626 -48304662 + LTR37A LTR ERV1 222 426 0 392 200 89 0 chr10 97284626 97284716 -48304572 + MIR SINE MIR 160 257 -5 217 277 108 24 chr10 97286107 97286190 -48303098 + MIR SINE MIR 66 155 -107 344 282 64 123 chr10 97286194 97286584 -48302704 - MLT1J LTR MaLR -144 367 1 324 0 0 0 chr10 97286677 97286713 -48302575 + (TG)n Simple_repeat Simple_repeat 1 36 0 572 308 101 13 chr10 97286912 97287149 -48302139 - MIR SINE MIR -1 261 4 2072 203 27 47 chr10 97287225 97288014 -48301274 + L1MC4 LINE L1 7086 7808 0 337 263 140 9 chr10 97288148 97288262 -48301026 + MER91B DNA MER1_type 2 130 -60 344 255 61 0 chr10 97288276 97288374 -48300914 + MER91B DNA MER1_type 87 190 0 419 245 262 28 chr10 97288679 97289038 -48300250 - MLT1L LTR MaLR 0 615 173 338 254 34 90 chr10 97289067 97289244 -48300044 - MLT1L LTR MaLR -415 200 34 2687 165 59 40 chr10 97289354 97289948 -48299340 + L1MB2 LINE L1 5563 6167 -4 22 0 0 0 chr10 97290377 97290399 -48298889 + AT_rich Low_complexity Low_complexity 1 22 0 2466 70 0 0 chr10 97290516 97290814 -48298474 - AluY SINE Alu -12 299 2 2060 148 3 0 chr10 97291097 97291402 -48297886 + AluSx SINE Alu 1 306 -6 2001 93 83 0 chr10 97291455 97291733 -48297555 + AluY SINE Alu 9 309 -2 227 219 12 24 chr10 97291763 97291845 -48297443 + L1ME4a LINE L1 5983 6063 -58 2542 119 23 56 chr10 97292273 97292703 -48296585 + Tigger2a DNA MER2_type 1 416 -18 343 271 60 23 chr10 97293877 97294010 -48295278 + MIR SINE MIR 108 245 -17 2186 123 0 0 chr10 97294012 97294320 -48294968 - AluSx SINE Alu -2 310 3 353 261 119 101 chr10 97295166 97295239 -48294049 + HAL1 LINE L1 1234 1304 -1203 2129 104 10 0 chr10 97295239 97295528 -48293760 - AluSg SINE Alu -18 292 1 353 261 119 101 chr10 97295528 97295772 -48293516 + HAL1 LINE L1 1304 1557 -950 4214 221 58 37 chr10 97296327 97296692 -48292596 - L1MC4a LINE L1 0 7808 7452 1826 176 7 3 chr10 97296692 97296998 -48292290 - AluJo SINE Alu -4 308 2 4214 221 58 37 chr10 97296998 97297379 -48291909 - L1MC4a LINE L1 -356 7452 7080 2047 152 75 52 chr10 97297379 97297819 -48291469 - LTR47A LTR ERVL -2 450 1 4214 221 58 37 chr10 97297819 97298354 -48290934 - L1MC4a LINE L1 -728 7080 6596 1701 175 3 10 chr10 97298354 97298651 -48290637 + AluJo SINE Alu 2 296 -16 4214 221 58 37 chr10 97298651 97298704 -48290584 - L1MC4a LINE L1 -1212 6596 6546 339 304 62 12 chr10 97298979 97299140 -48290148 - MER117 DNA MER1_type -16 181 13 183 302 115 31 chr10 97300037 97300133 -48289155 - L2 LINE L2 -30 3283 3180 357 164 74 25 chr10 97300144 97300266 -48289022 + L1ME4a LINE L1 5992 6119 -2 192 256 146 37 chr10 97300835 97300917 -48288371 - MIR SINE MIR 0 262 172 621 221 39 100 chr10 97300927 97301158 -48288130 - MER46C DNA MER2_type 0 338 122 5290 279 22 15 chr10 97301482 97303241 -48286047 - Tigger4(Zombi) DNA MER2_type -601 2130 360 296 245 14 84 chr10 97303271 97303414 -48285874 - MER46C DNA MER2_type -205 133 1 243 145 145 48 chr10 97303426 97303488 -48285800 - MIR SINE MIR -120 142 75 5490 128 19 31 chr10 97304283 97305188 -48284100 + MER4D LTR ERV1 10 903 0 642 172 31 8 chr10 97305226 97305354 -48283934 + L1PA15 LINE L1 6035 6165 0 40 21 0 0 chr10 97305393 97305440 -48283848 + AT_rich Low_complexity Low_complexity 1 47 0 2273 123 31 18 chr10 97305440 97305830 -48283458 - Tigger3b DNA MER2_type -506 725 331 1898 169 0 0 chr10 97306044 97306351 -48282937 - AluJb SINE Alu -5 307 1 230 260 30 30 chr10 97306512 97306612 -48282676 - HAL1 LINE L1 -164 2343 2244 210 313 81 20 chr10 97306830 97306929 -48282359 + L2 LINE L2 2782 2886 -428 262 246 213 16 chr10 97307105 97307227 -48282061 - L2 LINE L2 -10 3303 3158 267 269 75 6 chr10 97307245 97307384 -48281904 - MIR SINE MIR -25 237 8 760 182 139 6 chr10 97307454 97307619 -48281669 - MER105 DNA DNA -16 188 2 274 301 60 36 chr10 97307870 97307953 -48281335 + MIR SINE MIR 20 104 -158 262 294 33 0 chr10 97307955 97308047 -48281241 - MIR SINE MIR -26 236 142 * 481 287 88 11 chr10 97307993 97308174 -48281114 + MIR SINE MIR 43 237 -25 474 313 97 44 chr10 97308390 97308751 -48280537 + L2 LINE L2 2530 2909 -405 * 520 291 160 52 chr10 97308729 97309135 -48280153 - L2 LINE L2 -1 3312 2863 1067 242 162 58 chr10 97309241 97309939 -48279349 - L1MC4 LINE L1 -32 8010 7140 605 260 75 25 chr10 97310759 97310959 -48278329 + MIR SINE MIR 51 260 -2 202 333 111 20 chr10 97311725 97311824 -48277464 - L2 LINE L2 -63 3209 3102 1229 220 76 43 chr10 97312191 97312613 -48276675 - LTR55 LTR ERV -15 533 98 2278 89 7 0 chr10 97312622 97312924 -48276364 - AluSc SINE Alu -5 304 1 392 226 39 10 chr10 97312962 97313064 -48276224 - LTR55 LTR ERV -443 105 1 180 255 0 21 chr10 97313337 97313384 -48275904 - MIR SINE MIR -31 231 186 2231 89 7 10 chr10 97313428 97313730 -48275558 - AluSg1 SINE Alu -8 301 1 1186 244 62 9 chr10 97314363 97314687 -48274601 + MER58B DNA MER1_type 1 341 0 2476 215 85 130 chr10 97314689 97317088 -48272200 - L1ME1 LINE L1 -294 5872 3590 2421 71 3 0 chr10 97317088 97317384 -48271904 - AluSp SINE Alu -16 297 1 2476 215 85 130 chr10 97317384 97317540 -48271748 - L1ME1 LINE L1 -2576 3590 3428 206 200 33 0 chr10 97318512 97318572 -48270716 + (TTA)n Simple_repeat Simple_repeat 1 62 0 1955 125 3 54 chr10 97319089 97319402 -48269886 - AluSx SINE Alu -15 297 1 278 213 28 11 chr10 97320713 97320803 -48268485 - L1P5 LINE L1 -392 5764 5677 1665 194 3 13 chr10 97321111 97321426 -48267862 - AluJo SINE Alu 0 312 1 198 273 212 30 chr10 97321442 97321541 -48267747 - L2 LINE L2 0 3313 3197 2146 124 7 3 chr10 97321951 97322249 -48267039 + AluSx SINE Alu 3 301 -11 267 177 126 158 chr10 97322351 97322566 -48266722 + L1ME4a LINE L1 5563 5770 -351 232 257 69 10 chr10 97322652 97322753 -48266535 + L1ME4a LINE L1 5968 6074 -47 28 0 0 0 chr10 97323042 97323070 -48266218 + AT_rich Low_complexity Low_complexity 1 28 0 2286 80 11 0 chr10 97323070 97323357 -48265931 + AluSc SINE Alu 1 290 -19 476 213 37 142 chr10 97324383 97324579 -48264709 + MER112 DNA MER1_type 2 167 -93 1969 149 0 0 chr10 97324579 97324894 -48264394 + AluJb SINE Alu 1 315 0 476 213 37 142 chr10 97324894 97324962 -48264326 + MER112 DNA MER1_type 167 241 -19 1704 149 64 20 chr10 97327112 97327407 -48261881 + AluJo SINE Alu 1 308 -4 1214 270 165 22 chr10 97328695 97329381 -48259907 - L1MC4 LINE L1 0 8042 7259 2022 119 3 14 chr10 97329567 97329877 -48259411 - AluSg SINE Alu 0 307 1 1797 180 10 3 chr10 97330265 97330565 -48258723 + AluJo SINE Alu 6 307 -5 1654 200 20 7 chr10 97330783 97331078 -48258210 - AluJo SINE Alu -13 299 1 2423 87 0 0 chr10 97331259 97331568 -48257720 + AluY SINE Alu 2 310 -1 289 290 87 14 chr10 97332446 97332584 -48256704 + MIR SINE MIR 112 259 -3 1979 132 0 10 chr10 97333115 97333418 -48255870 + AluSx SINE Alu 1 300 -12 21 0 0 0 chr10 97333463 97333484 -48255804 + AT_rich Low_complexity Low_complexity 1 21 0 1672 147 7 53 chr10 97333484 97333784 -48255504 - AluSx SINE Alu -24 288 3 182 237 0 0 chr10 97334340 97334378 -48254910 - L3 LINE CR1 -11 1566 1529 27 29 0 0 chr10 97334455 97334489 -48254799 + AT_rich Low_complexity Low_complexity 1 34 0 550 244 8 0 chr10 97334490 97334609 -48254679 - FLAM_C SINE Alu -12 121 2 1500 163 14 37 chr10 97335690 97335985 -48253303 - AluJo SINE Alu -24 288 1 937 183 0 7 chr10 97336132 97336285 -48253003 - AluJb SINE Alu -19 293 142 22 0 0 0 chr10 97336993 97337015 -48252273 + AT_rich Low_complexity Low_complexity 1 22 0 442 226 323 5 chr10 97337416 97337522 -48251766 - MIR SINE MIR -13 249 178 1886 125 29 26 chr10 97337522 97337833 -48251455 - AluSx SINE Alu 0 312 1 442 226 323 5 chr10 97337833 97337912 -48251376 - MIR SINE MIR -84 178 5 402 21 0 0 chr10 97337928 97337975 -48251313 + (TG)n Simple_repeat Simple_repeat 2 48 0 25 75 0 0 chr10 97339265 97339318 -48249970 + AT_rich Low_complexity Low_complexity 1 53 0 220 373 0 13 chr10 97339328 97339403 -48249885 - L2 LINE L2 -11 3261 3188 246 381 85 14 chr10 97339731 97340012 -48249276 - L2 LINE L2 -452 2862 2562 1700 164 14 10 chr10 97341150 97341443 -48247845 - AluJo SINE Alu -16 296 3 21 0 0 0 chr10 97342471 97342492 -48246796 + AT_rich Low_complexity Low_complexity 1 21 0 2059 128 0 3 chr10 97343150 97343440 -48245848 + AluSq SINE Alu 1 289 -24 300 350 29 0 chr10 97343988 97344091 -48245197 + MER5A DNA MER1_type 83 188 -1 184 318 32 0 chr10 97344370 97344433 -48244855 - L2 LINE L2 -72 3200 3136 2297 83 0 7 chr10 97344558 97344860 -48244428 - AluSc SINE Alu -9 300 1 271 248 143 9 chr10 97345777 97345882 -48243406 - MIR SINE MIR -71 191 73 21 57 0 0 chr10 97348582 97348617 -48240671 + AT_rich Low_complexity Low_complexity 1 35 0 453 267 104 2 chr10 97349034 97349412 -48239876 - L1ME3A LINE L1 -298 5872 5296 578 256 45 27 chr10 97349458 97349793 -48239495 - MER21B LTR ERV1 -374 489 98 1042 146 13 0 chr10 97349831 97349989 -48239299 - FRAM SINE Alu -13 163 4 3547 128 8 6 chr10 97350067 97350591 -48238697 - MER1A DNA MER1_type -1 526 2 351 198 80 160 chr10 97350675 97350815 -48238473 - MIR SINE MIR -3 259 144 3684 179 35 41 chr10 97350815 97351548 -48237740 + MER44D DNA MER2_type 1 601 -4 351 198 80 160 chr10 97351548 97351644 -48237644 - MIR SINE MIR -118 144 42 2093 84 13 10 chr10 97351869 97352168 -48237120 - AluY SINE Alu -11 300 1 24 0 0 0 chr10 97353606 97353630 -48235658 + AT_rich Low_complexity Low_complexity 1 24 0 235 125 75 0 chr10 97353661 97353701 -48235587 + MLT1F1 LTR MaLR 83 125 -442 1211 192 102 15 chr10 97353701 97354138 -48235150 + L1MD3 LINE L1 7404 7981 -14 1781 92 0 0 chr10 97354804 97355032 -48234256 + AluSg SINE Alu 1 228 -82 540 87 0 68 chr10 97355142 97355245 -48234043 - AluSc SINE Alu -3 306 211 3774 142 63 31 chr10 97355544 97356305 -48232983 - LTR1 LTR ERV1 0 785 1 6944 28 0 0 chr10 97356642 97357457 -48231831 + L1PA3 LINE L1 5336 6150 -5 2305 92 0 0 chr10 97357577 97357872 -48231416 - AluSq SINE Alu -18 295 1 267 236 0 42 chr10 97357962 97358034 -48231254 - MIR3 SINE MIR -130 78 10 2186 147 88 72 chr10 97358931 97359443 -48229845 - L1MB7 LINE L1 -19 6165 5646 22 0 0 0 chr10 97360372 97360394 -48228894 + AT_rich Low_complexity Low_complexity 1 22 0 395 325 41 0 chr10 97360692 97360815 -48228473 - L2 LINE L2 0 3313 3186 271 225 56 34 chr10 97361519 97361608 -48227680 + MIR SINE MIR 69 159 -103 2132 98 10 7 chr10 97363184 97363480 -48225808 - AluSc SINE Alu -12 297 1 22 0 0 0 chr10 97363535 97363557 -48225731 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr10 97363908 97363932 -48225356 + AT_rich Low_complexity Low_complexity 1 24 0 548 223 17 13 chr10 97364927 97365156 -48224132 + CT-rich Low_complexity Low_complexity 1 230 0 1605 196 0 14 chr10 97365156 97365452 -48223836 - AluJo SINE Alu -14 298 7 395 181 80 5 chr10 97365787 97365881 -48223407 - L1MD3 LINE L1 -6 7989 6233 1464 269 133 44 chr10 97366179 97366604 -48222684 - L1ME3 LINE L1 -83 6079 5693 270 0 0 0 chr10 97366604 97366634 -48222654 + (TA)n Simple_repeat Simple_repeat 1 30 0 1464 269 133 44 chr10 97366634 97367354 -48221934 - L1ME3 LINE L1 -469 5693 4845 1480 228 129 19 chr10 97367355 97367944 -48221344 - L1M4 LINE L1 -1155 4991 4338 261 312 176 14 chr10 97369134 97369355 -48219933 + MIR SINE MIR 3 259 -3 284 327 15 47 chr10 97369693 97369841 -48219447 + MIR SINE MIR 74 216 -46 232 324 97 32 chr10 97370724 97370909 -48218379 - L2 LINE L2 -9 3304 3108 629 202 0 25 chr10 97371055 97371174 -48218114 - FLAM_A SINE Alu -17 116 1 665 231 97 89 chr10 97371521 97371867 -48217421 - MLT1G LTR MaLR -187 355 3 277 282 60 31 chr10 97371877 97371992 -48217296 - MER5A DNA MER1_type -54 135 7 2012 130 10 0 chr10 97372563 97372856 -48216432 + AluSx SINE Alu 1 296 -16 210 150 0 50 chr10 97373373 97373433 -48215855 + (TTA)n Simple_repeat Simple_repeat 1 57 0 263 26 51 0 chr10 97373433 97373472 -48215816 + (TTTA)n Simple_repeat Simple_repeat 3 43 0 7550 28 7 0 chr10 97373472 97374785 -48214503 - L1PA3 LINE L1 -13 6142 4825 4148 26 12 0 chr10 97374785 97375292 -48213996 + L1PA3 LINE L1 4323 4835 -1311 * 4346 38 0 0 chr10 97375289 97375821 -48213467 - L1PA3 LINE L1 -4220 1926 1395 2368 88 0 0 chr10 97375818 97376146 -48213142 + L1PA3 LINE L1 1063 1390 -4756 * 30 27 0 0 chr10 97376410 97376447 -48212841 + AT_rich Low_complexity Low_complexity 1 37 0 28 0 0 0 chr10 97376533 97376561 -48212727 + AT_rich Low_complexity Low_complexity 1 28 0 1183 83 18 0 chr10 97376748 97376916 -48212372 - L1PA7 LINE L1 0 6154 5984 1017 203 9 22 chr10 97377530 97377752 -48211536 - MER20 DNA MER1_type 0 219 1 1278 62 96 0 chr10 97378828 97378970 -48210318 + MER107 DNA MER1_type 4 168 -29 285 29 0 0 chr10 97378970 97379004 -48210284 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1278 62 96 0 chr10 97379004 97379038 -48210250 + MER107 DNA MER1_type 168 197 0 462 244 16 16 chr10 97379541 97379664 -48209624 - MER119 DNA MER1_type 0 583 461 576 243 216 6 chr10 97379675 97379856 -48209432 - MER119 DNA MER1_type -359 224 6 205 200 0 0 chr10 97380168 97380208 -48209080 + T-rich Low_complexity Low_complexity 1 40 0 626 312 131 46 chr10 97380360 97380933 -48208355 + L2 LINE L2 2631 3281 -32 2158 226 134 19 chr10 97380985 97381569 -48207719 + MER76 LTR ERV 38 688 0 30 27 0 0 chr10 97382931 97382968 -48206320 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr10 97383361 97383382 -48205906 + AT_rich Low_complexity Low_complexity 1 21 0 18125 175 33 21 chr10 97384111 97391787 -48197501 - L1MA1 LINE L1 -7 7714 12 260 208 170 47 chr10 97391910 97392016 -48197272 - MIR3 SINE MIR -7 201 83 960 254 40 5 chr10 97392346 97392570 -48196718 - MER82 DNA MER2_type -1 652 421 684 288 78 38 chr10 97392735 97392803 -48196485 + L1ME LINE L1 1037 1101 -5500 2171 131 0 0 chr10 97392803 97393100 -48196188 - AluSq SINE Alu -16 297 1 684 288 78 38 chr10 97393100 97393755 -48195533 + L1ME LINE L1 1101 1736 -4865 1059 16 8 0 chr10 97393755 97393883 -48195405 - L1PA4 LINE L1 -3 6152 6024 684 288 78 38 chr10 97393883 97393919 -48195369 + L1ME LINE L1 1736 1769 -4832 557 231 52 16 chr10 97393914 97394143 -48195145 + L1ME1 LINE L1 5202 5437 -733 * 411 227 157 10 chr10 97394147 97394345 -48194943 + L1ME1 LINE L1 5937 6163 -3 4431 88 32 3 chr10 97394688 97395304 -48193984 - MER51A LTR ERV1 0 634 1 2886 78 10 0 chr10 97396844 97397254 -48192034 - L1P5 LINE L1 -427 5724 5311 2127 125 0 68 chr10 97397307 97397371 -48191917 - L1PB1 LINE L1 -8 6143 6076 2880 3 0 0 chr10 97397371 97397682 -48191606 - AluYa5 SINE Alu 0 311 1 2127 125 0 68 chr10 97397682 97398002 -48191286 - L1PB1 LINE L1 -75 6076 5785 239 216 18 36 chr10 97398005 97398116 -48191172 + (TTATA)n Simple_repeat Simple_repeat 2 110 0 309 95 95 6 chr10 97398118 97398425 -48190863 + (TA)n Simple_repeat Simple_repeat 1 334 0 6010 123 63 12 chr10 97398425 97400264 -48189024 - L1PBa LINE L1 -4776 2087 4 273 250 0 0 chr10 97401745 97401805 -48187483 + MER58 DNA MER1_type 183 242 -2178 2307 161 133 26 chr10 97401807 97402303 -48186985 - MER44D DNA MER2_type 0 605 2 928 197 24 14 chr10 97402770 97402978 -48186310 + MER2 DNA MER2_type 1 210 -135 483 278 59 35 chr10 97403354 97403523 -48185765 - MER5B DNA MER1_type 0 178 6 316 65 0 0 chr10 97405208 97405254 -48184034 + MADE1 DNA Mariner 1 46 -34 2538 150 14 18 chr10 97405544 97405978 -48183310 - MSTB1 LTR MaLR 0 432 1 422 208 10 21 chr10 97406109 97406205 -48183083 - L2 LINE L2 -9 3263 3169 1915 129 34 34 chr10 97406270 97406564 -48182724 - AluSx SINE Alu -18 294 1 355 123 15 15 chr10 97406589 97406654 -48182634 - MSTB1 LTR MaLR 0 432 368 219 342 57 25 chr10 97406750 97406908 -48182380 + L2 LINE L2 2855 3017 -255 4429 74 48 0 chr10 97406965 97407547 -48181741 + LTR66 LTR ERVL 1 610 0 446 136 12 0 chr10 97408172 97408253 -48181035 + MER53 DNA DNA 105 186 -3 182 327 0 0 chr10 97408571 97408623 -48180665 + MIR3 SINE MIR 151 202 -6 227 274 16 16 chr10 97408782 97408844 -48180444 - L2 LINE L2 -1 3271 3210 283 333 45 26 chr10 97409674 97409941 -48179347 + L1M3c LINE L1 901 1172 -5865 2297 194 45 5 chr10 97410444 97411054 -48178234 + L1M3c LINE L1 1846 2485 -4552 268 233 0 41 chr10 97411057 97411100 -48178188 + (CATATA)n Simple_repeat Simple_repeat 3 46 -26 2481 67 0 0 chr10 97411100 97411400 -48177888 + AluY SINE Alu 1 300 -11 268 233 0 41 chr10 97411400 97411406 -48177882 + (CATATA)n Simple_repeat Simple_repeat 46 51 -21 14668 141 11 14 chr10 97411406 97412247 -48177041 - Tigger1 DNA MER2_type 0 2418 1576 1862 164 0 0 chr10 97412247 97412533 -48176755 - AluJb SINE Alu -26 286 1 14668 141 11 14 chr10 97412533 97414117 -48175171 - Tigger1 DNA MER2_type -842 1576 1 268 233 0 41 chr10 97414117 97414139 -48175149 + (CATATA)n Simple_repeat Simple_repeat 51 72 0 2713 147 12 25 chr10 97414159 97414676 -48174612 + L1MA9 LINE L1 5803 6312 0 54 49 0 0 chr10 97414676 97414758 -48174530 + AT_rich Low_complexity Low_complexity 1 82 0 329 314 34 11 chr10 97414862 97415103 -48174185 - L1ME4a LINE L1 -213 5908 5689 659 226 71 19 chr10 97417030 97417242 -48172046 - MER90 LTR ERV1 -2 573 351 1486 188 17 7 chr10 97417766 97418053 -48171235 + AluJo SINE Alu 1 290 -22 363 337 94 20 chr10 97418928 97419130 -48170158 + MIR SINE MIR 40 256 -6 333 351 0 0 chr10 97419724 97419838 -48169450 - MER81 DNA DNA 0 114 1 271 331 49 28 chr10 97420182 97420324 -48168964 + MER5A DNA MER1_type 21 165 -24 656 24 12 0 chr10 97420426 97420508 -48168780 + (TCTA)n Simple_repeat Simple_repeat 4 86 0 367 256 56 22 chr10 97420613 97420703 -48168585 + L2 LINE L2 3142 3234 -38 26 0 0 0 chr10 97421723 97421749 -48167539 + AT_rich Low_complexity Low_complexity 1 26 0 5297 133 49 13 chr10 97421769 97423172 -48166116 - L1MA8 LINE L1 -12 6279 4831 3596 134 44 13 chr10 97423396 97424029 -48165259 + MER39B LTR ERV1 1 653 0 1160 167 27 116 chr10 97424054 97424425 -48164863 - LTR49 LTR ERV1 -256 339 2 1556 160 7 15 chr10 97425206 97425475 -48163813 - AluJo SINE Alu -45 267 1 290 252 96 43 chr10 97425599 97425714 -48163574 + L2 LINE L2 2950 3070 -202 596 248 80 48 chr10 97425779 97426009 -48163279 - MIR SINE MIR -3 259 18 229 261 0 72 chr10 97426103 97426172 -48163116 + L2 LINE L2 3191 3254 -18 2017 279 120 26 chr10 97426269 97426558 -48162730 + L2 LINE L2 1900 2160 -1153 2253 89 0 0 chr10 97426558 97426888 -48162400 + AluY SINE Alu 1 330 0 2017 279 120 26 chr10 97426888 97427679 -48161609 + L2 LINE L2 2160 2875 -438 2411 120 28 14 chr10 97427679 97428038 -48161250 - THE1B LTR MaLR 0 364 1 11479 87 23 1 chr10 97428038 97429583 -48159705 - THE1B-int LTR MaLR 0 1580 1 2452 112 28 11 chr10 97429583 97429941 -48159347 - THE1B LTR MaLR 0 364 1 2017 279 120 26 chr10 97429941 97429997 -48159291 + L2 LINE L2 2874 3135 -178 216 179 0 0 chr10 97430059 97430098 -48159190 + (TTCA)n Simple_repeat Simple_repeat 1 39 0 1903 151 3 28 chr10 97430207 97430524 -48158764 + AluJb SINE Alu 1 309 -3 1862 154 7 0 chr10 97430533 97430844 -48158444 + AluSx SINE Alu 3 315 0 208 299 45 0 chr10 97431533 97431600 -48157688 + L3 LINE CR1 600 669 -908 2092 124 7 0 chr10 97431737 97432028 -48157260 - AluSx SINE Alu -17 295 3 216 218 13 13 chr10 97432264 97432388 -48156900 + (TTAAA)n Simple_repeat Simple_repeat 1 124 0 490 239 0 0 chr10 97432730 97432845 -48156443 + MER92B LTR ERV1 2 116 -438 420 169 0 0 chr10 97432957 97433028 -48156260 + MER92C LTR ERV1 484 554 0 310 346 54 0 chr10 97433079 97433209 -48156079 - L2 LINE L2 -25 3247 3111 39 84 0 0 chr10 97433926 97434021 -48155267 + AT_rich Low_complexity Low_complexity 1 95 0 191 163 23 23 chr10 97434089 97434132 -48155156 - MIR SINE MIR -91 171 129 399 313 30 15 chr10 97436267 97436401 -48152887 - L2 LINE L2 -1 3271 3136 452 345 76 22 chr10 97436823 97436990 -48152298 - L2 LINE L2 -427 2887 2730 585 105 0 0 chr10 97436990 97437076 -48152212 + (TA)n Simple_repeat Simple_repeat 2 87 0 452 345 76 22 chr10 97437076 97437224 -48152064 - L2 LINE L2 -584 2730 2555 968 333 72 7 chr10 97437229 97437671 -48151617 - MLT1J LTR MaLR -2 509 39 251 356 73 26 chr10 97437707 97437898 -48151390 - L2 LINE L2 -759 2555 2356 475 291 54 0 chr10 97438040 97438263 -48151025 - L1MC4a LINE L1 -1879 5929 5695 320 315 166 3 chr10 97438275 97438570 -48150718 - L1MC4a LINE L1 -2174 5634 5292 277 273 68 39 chr10 97438762 97438967 -48150321 - L1ME4a LINE L1 -180 5941 5731 382 255 101 7 chr10 97439477 97439626 -48149662 + ERVL-E LTR ERVL 5594 5756 -8 637 245 114 23 chr10 97439627 97440134 -48149154 + MLT2E LTR ERVL 2 588 -40 256 240 160 0 chr10 97440149 97440224 -48149064 + L2 LINE L2 3226 3312 -1 761 260 77 37 chr10 97441360 97441903 -48147385 - HAL1 LINE L1 -32 2475 1911 820 189 74 49 chr10 97441915 97442159 -48147129 + ORSL DNA AcHobo 25 274 -1 609 254 103 26 chr10 97442176 97442448 -48146840 - HAL1 LINE L1 -607 1900 1608 2800 147 70 0 chr10 97442448 97442960 -48146328 - MER34B LTR ERV1 0 565 18 299 191 0 16 chr10 97442965 97443028 -48146260 - HAL1 LINE L1 -899 1608 1547 563 285 167 15 chr10 97443170 97443636 -48145652 - HAL1 LINE L1 -1946 561 25 1680 154 42 0 chr10 97443682 97443968 -48145320 - AluSg SINE Alu -12 298 1 2100 145 7 3 chr10 97444385 97444688 -48144600 + AluSx SINE Alu 5 308 -4 25 31 0 0 chr10 97444715 97444747 -48144541 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr10 97444889 97444910 -48144378 + AT_rich Low_complexity Low_complexity 1 21 0 444 250 0 51 chr10 97444910 97445066 -48144222 - MLT1K LTR MaLR -4 584 437 21 0 0 0 chr10 97445259 97445280 -48144008 + AT_rich Low_complexity Low_complexity 1 21 0 562 295 112 25 chr10 97445500 97445903 -48143385 + LTR67 LTR ERVL 101 538 -19 644 227 170 18 chr10 97446150 97446379 -48142909 + L2 LINE L2 2560 2823 -491 571 143 42 17 chr10 97449352 97449471 -48139817 - Charlie1 DNA MER1_type -2 2759 2638 * 1621 170 115 0 chr10 97449470 97449834 -48139454 - Charlie1 DNA MER1_type -1746 1015 610 1445 262 172 5 chr10 97449942 97450711 -48138577 - L1ME2 LINE L1 -26 6138 5239 489 311 40 0 chr10 97450740 97450891 -48138397 + L2 LINE L2 2820 2976 -338 407 304 88 15 chr10 97450987 97451191 -48138097 - L1MC5 LINE L1 -204 7757 7539 6154 175 35 32 chr10 97451272 97451730 -48137558 - L1PB4 LINE L1 -2 6469 6014 2297 76 7 3 chr10 97451730 97452020 -48137268 - AluSp SINE Alu -20 293 3 6154 175 35 32 chr10 97452020 97453183 -48136105 - L1PB4 LINE L1 -457 6014 4841 1932 176 0 0 chr10 97453183 97453489 -48135799 - AluJo SINE Alu -4 308 3 6154 175 35 32 chr10 97453489 97454237 -48135051 - L1PB4 LINE L1 -1630 4841 4097 728 136 0 0 chr10 97454232 97454342 -48134946 - L1PB4 LINE L1 -6346 115 6 * 213 324 44 0 chr10 97454351 97454419 -48134869 - MIR SINE MIR -55 153 83 225 94 0 0 chr10 97454853 97454885 -48134403 + (CA)n Simple_repeat Simple_repeat 1 32 0 404 109 0 0 chr10 97455081 97455145 -48134143 + MER53 DNA DNA 2 65 -124 331 294 0 29 chr10 97456005 97456107 -48133181 + GA-rich Low_complexity Low_complexity 6 104 0 397 211 32 21 chr10 97456700 97456795 -48132493 + MER103 DNA DNA 64 159 -7 1177 207 44 0 chr10 97457096 97457366 -48131922 + Charlie4 DNA MER1_type 17 298 -1663 647 225 0 36 chr10 97457369 97457507 -48131781 - FLAM_A SINE Alu 0 133 1 183 289 22 0 chr10 97457541 97457586 -48131702 + L2 LINE L2 3258 3303 -10 1842 192 0 6 chr10 97457777 97458089 -48131199 + AluJb SINE Alu 1 310 -2 2336 103 0 3 chr10 97458384 97458694 -48130594 + AluSc SINE Alu 1 309 0 882 244 105 52 chr10 97458908 97459290 -48129998 + MLT1C LTR MaLR 34 435 -32 252 185 0 0 chr10 97459700 97459754 -48129534 + (TG)n Simple_repeat Simple_repeat 2 55 0 1555 69 15 0 chr10 97460914 97461118 -48128170 + L1PA7 LINE L1 5948 6154 0 347 356 82 7 chr10 97461896 97462042 -48127246 + MIR SINE MIR 1 157 -105 234 202 39 77 chr10 97462213 97462317 -48126971 + MIR SINE MIR 163 262 0 1615 159 80 14 chr10 97462888 97463240 -48126048 + THE1C LTR MaLR 1 375 0 26 30 0 0 chr10 97464058 97464091 -48125197 + AT_rich Low_complexity Low_complexity 1 33 0 206 214 34 34 chr10 97464590 97464679 -48124609 + (TA)n Simple_repeat Simple_repeat 2 90 0 1241 176 0 38 chr10 97464704 97464942 -48124346 - AluJo SINE Alu 0 312 84 393 316 124 15 chr10 97467469 97467735 -48121553 - L3b LINE CR1 -184 1399 1105 3627 229 73 25 chr10 97468102 97469900 -48119388 + L1ME2 LINE L1 3964 5851 -313 1386 178 118 0 chr10 97469948 97470279 -48119009 + MER63 DNA MER1_type 675 1044 -18 762 229 66 46 chr10 97470281 97470583 -48118705 + L1ME2 LINE L1 5848 6155 -9 471 18 0 0 chr10 97470648 97470704 -48118584 + (CA)n Simple_repeat Simple_repeat 2 57 0 405 211 0 0 chr10 97470903 97470979 -48118309 - MER58C DNA MER1_type -22 193 118 419 225 0 8 chr10 97470979 97471108 -48118180 + CT-rich Low_complexity Low_complexity 3 130 0 13001 167 35 34 chr10 97471221 97471654 -48117634 - L1MA1 LINE L1 -227 7494 7063 1035 40 0 0 chr10 97471654 97471773 -48117515 + L1PA3 LINE L1 6030 6155 0 13001 167 35 34 chr10 97471773 97475452 -48113836 - L1MA1 LINE L1 -658 7063 3357 235 132 0 0 chr10 97475448 97475486 -48113802 + L1M1 LINE L1 713 750 -6815 * 1731 312 41 8 chr10 97475508 97476283 -48113005 - L1MEc LINE L1 -5410 986 186 424 309 103 0 chr10 97477073 97477238 -48112050 - MIR SINE MIR -76 186 5 362 315 0 0 chr10 97478312 97478439 -48110849 - MLT1L LTR MaLR -137 478 352 260 220 110 64 chr10 97480137 97480246 -48109042 + MIR3 SINE MIR 65 178 -30 701 170 15 15 chr10 97480246 97480381 -48108907 - MLT1A1 LTR MaLR -2 372 238 722 230 155 0 chr10 97480382 97480595 -48108693 + MSTB2 LTR MaLR 1 246 -211 1402 192 57 170 chr10 97480604 97481410 -48107878 + LTR8A LTR ERV1 1 715 -12 288 258 11 22 chr10 97481413 97481502 -48107786 + MSTB2 LTR MaLR 252 339 -118 1549 171 58 76 chr10 97481528 97481991 -48107297 + LTR49 LTR ERV1 91 545 -50 706 172 17 52 chr10 97482037 97482211 -48107077 + MSTB2-int LTR MaLR 1484 1651 0 2336 158 33 33 chr10 97482211 97482668 -48106620 + MSTB2 LTR MaLR 1 457 0 1090 197 4 21 chr10 97482668 97482902 -48106386 - MLT1A1 LTR MaLR -135 230 1 376 306 30 25 chr10 97482943 97483142 -48106146 - MER102a DNA MER1_type -15 315 116 * 829 289 68 36 chr10 97483135 97483649 -48105639 + LTR33A LTR ERVL 15 520 -3 304 264 62 23 chr10 97483653 97483705 -48105583 - MER102a DNA MER1_type -196 134 85 1118 188 92 127 chr10 97483705 97484131 -48105157 - MLT2D LTR ERVL -3 411 1 304 264 62 23 chr10 97484131 97484207 -48105081 - MER102a DNA MER1_type -245 85 1 340 248 188 0 chr10 97484335 97484436 -48104852 + L2 LINE L2 3194 3313 0 233 330 0 34 chr10 97484450 97484538 -48104750 - L2 LINE L2 -5 3267 3183 11501 194 47 20 chr10 97484980 97485217 -48104071 - L1P5 LINE L1 -703 5508 5279 258 32 0 0 chr10 97485217 97485248 -48104040 + (TTA)n Simple_repeat Simple_repeat 2 32 0 11501 194 47 20 chr10 97485248 97487185 -48102103 - L1P5 LINE L1 -932 5279 3395 589 0 79 0 chr10 97487185 97487286 -48102002 + (TA)n Simple_repeat Simple_repeat 2 110 0 11501 194 47 20 chr10 97487286 97490471 -48098817 - L1P5 LINE L1 -2816 3395 1 3826 286 33 32 chr10 97490438 97492072 -48097216 - L1PBa LINE L1 -5226 1637 3 * 362 276 51 0 chr10 97492272 97492370 -48096918 - L2 LINE L2 0 3272 3170 206 363 50 0 chr10 97492605 97492685 -48096603 + L2 LINE L2 3149 3232 -40 734 250 19 19 chr10 97493318 97493526 -48095762 - MSTD LTR MaLR 0 396 189 470 156 46 0 chr10 97493661 97493758 -48095530 - MSTC LTR MaLR -295 101 1 341 339 26 56 chr10 97494068 97494263 -48095025 + L3 LINE CR1 117 305 -1272 3033 211 14 11 chr10 97494282 97494993 -48094295 - MER63C DNA MER1_type -149 781 69 333 235 0 0 chr10 97495010 97495095 -48094193 + (TA)n Simple_repeat Simple_repeat 2 86 0 263 91 0 23 chr10 97495201 97495245 -48094043 + (TCC)n Simple_repeat Simple_repeat 3 45 0 530 183 29 66 chr10 97495248 97495385 -48093903 - MER58C DNA MER1_type -83 132 1 5800 101 5 3 chr10 97496281 97497213 -48092075 - L1PB2 LINE L1 0 6151 5218 429 165 0 12 chr10 97497317 97497402 -48091886 - L1PB2 LINE L1 -908 5238 5155 330 311 87 6 chr10 97497565 97497726 -48091562 + MIR SINE MIR 89 262 0 264 291 33 46 chr10 97498021 97498172 -48091116 + L2 LINE L2 3165 3313 0 189 325 40 87 chr10 97498931 97499057 -48090231 + MIR SINE MIR 33 152 -56 1000 323 47 43 chr10 97499507 97500296 -48088992 - L2 LINE L2 -25 3288 2412 204 67 0 0 chr10 97500546 97500576 -48088712 + (T)n Simple_repeat Simple_repeat 1 30 0 1516 139 104 51 chr10 97500837 97501211 -48088077 - L1MA3 LINE L1 -1 6304 5911 333 281 37 18 chr10 97501473 97501637 -48087651 - L1ME4a LINE L1 0 6121 5955 383 293 23 15 chr10 97501674 97501807 -48087481 + L2 LINE L2 3180 3313 0 319 175 0 0 chr10 97502205 97502262 -48087026 + Tigger5 DNA MER2_type 1 57 -2266 1388 113 35 4 chr10 97502291 97502520 -48086768 + Tigger5 DNA MER2_type 2088 2323 0 254 143 79 0 chr10 97502810 97502873 -48086415 + MLT1K LTR MaLR 521 588 0 624 298 29 29 chr10 97503604 97503849 -48085439 + MIR SINE MIR 15 259 -3 289 252 2 0 chr10 97503955 97504030 -48085258 + MER58C DNA MER1_type 21 96 -119 246 301 55 49 chr10 97504030 97504213 -48085075 + MER92C LTR ERV1 1 184 -370 344 153 0 0 chr10 97504295 97504354 -48084934 + MER92C LTR ERV1 494 552 -2 396 218 20 10 chr10 97504372 97504473 -48084815 + MER58C DNA MER1_type 112 213 -2 285 317 89 16 chr10 97504780 97504903 -48084385 - MIR SINE MIR -111 151 20 210 279 225 16 chr10 97504920 97505049 -48084239 + L3 LINE CR1 1247 1402 -175 180 185 0 0 chr10 97505238 97505265 -48084023 + MER5B DNA MER1_type 22 48 -130 486 293 30 18 chr10 97506368 97506532 -48082756 - MIR SINE MIR -13 249 84 255 169 0 68 chr10 97506623 97506682 -48082606 - HERV16 LTR ERVL -2246 2750 2696 2270 102 3 3 chr10 97506692 97506995 -48082293 + AluSc SINE Alu 1 303 -6 3850 91 18 0 chr10 97507022 97507582 -48081706 + LTR43 LTR ERV1 1 570 -32 2018 138 55 0 chr10 97507594 97507885 -48081403 - AluSx SINE Alu -4 308 2 2109 118 13 47 chr10 97507885 97508267 -48081021 - THE1C LTR MaLR -6 369 1 260 79 0 0 chr10 97508267 97508304 -48080984 + LTR43 LTR ERV1 566 602 0 985 341 58 5 chr10 97508331 97508955 -48080333 - HERV16 LTR ERVL -2851 2634 1978 384 356 27 11 chr10 97509259 97509447 -48079841 - HERV16 LTR ERVL -4082 1682 1492 257 312 32 0 chr10 97509541 97509698 -48079590 - L1MEc LINE L1 -4807 1756 1595 318 336 121 0 chr10 97509714 97509863 -48079425 - L1MEc LINE L1 -5073 1311 1145 254 193 96 0 chr10 97509997 97510080 -48079208 + L1ME3A LINE L1 5177 5267 -879 390 196 77 2 chr10 97510156 97510328 -48078960 + L1ME3A LINE L1 5294 5463 -693 670 171 8 16 chr10 97510372 97510501 -48078787 + FLAM_C SINE Alu 1 128 -5 203 316 18 0 chr10 97510596 97510653 -48078635 + L2 LINE L2 3205 3262 -10 283 229 84 0 chr10 97510981 97511064 -48078224 + MER103 DNA DNA 67 156 -10 986 257 91 49 chr10 97511382 97511853 -48077435 + L1ME3A LINE L1 5680 6170 0 360 313 78 56 chr10 97511974 97512153 -48077135 - MIR SINE MIR -68 194 12 719 172 8 0 chr10 97512256 97512384 -48076904 - L1MA3 LINE L1 0 6305 6177 186 43 0 0 chr10 97512497 97512520 -48076768 + (CA)n Simple_repeat Simple_repeat 2 24 0 242 130 0 93 chr10 97512534 97512588 -48076700 - MER63 DNA MER1_type -157 53 5 528 299 85 55 chr10 97513439 97513710 -48075578 + L2 LINE L2 2989 3267 -5 249 313 75 22 chr10 97514292 97514426 -48074862 + MER5A DNA MER1_type 7 147 -42 237 271 83 62 chr10 97514609 97514753 -48074535 + LTR16A1 LTR ERVL 180 326 -131 335 300 69 10 chr10 97514753 97515009 -48074279 - LTR16A1 LTR ERVL -8 449 120 2109 156 31 38 chr10 97515067 97515442 -48073846 + MLT2D LTR ERVL 1 374 -40 410 53 18 0 chr10 97515442 97515499 -48073789 + (CA)n Simple_repeat Simple_repeat 2 59 0 2109 156 31 38 chr10 97515499 97515540 -48073748 + MLT2D LTR ERVL 374 414 0 449 296 8 0 chr10 97515569 97515694 -48073594 + LTR16A1 LTR ERVL 330 455 -2 11456 164 31 11 chr10 97515712 97518757 -48070531 - L1PA13 LINE L1 0 6814 3728 8483 195 44 10 chr10 97518758 97520804 -48068484 - L1PA13 LINE L1 -3432 3365 1196 246 62 0 0 chr10 97520804 97520836 -48068452 + (CAG)n Simple_repeat Simple_repeat 1 32 0 8483 195 44 10 chr10 97520836 97521480 -48067808 - L1PA13 LINE L1 -5601 1196 575 211 239 0 0 chr10 97521481 97521527 -48067761 + MER5A DNA MER1_type 144 189 0 261 196 0 18 chr10 97521537 97521593 -48067695 - MLT1H LTR MaLR 0 549 495 292 234 32 21 chr10 97522688 97522782 -48066506 - MLT1H-int LTR MaLR -1640 95 1 226 194 48 0 chr10 97522782 97522844 -48066444 - MLT1H LTR MaLR 0 549 485 1658 174 3 17 chr10 97522844 97523171 -48066117 + AluJb SINE Alu 1 323 0 604 249 89 0 chr10 97524198 97524367 -48064921 - MLT1J2 LTR MaLR 0 450 267 2133 214 29 42 chr10 97524497 97525020 -48064268 + MLT1F1 LTR MaLR 52 567 0 519 236 34 58 chr10 97525020 97525227 -48064061 - MLT1J2 LTR MaLR -248 202 1 498 256 159 26 chr10 97525437 97525632 -48063656 - MIR SINE MIR -2 260 40 293 281 35 44 chr10 97525938 97526052 -48063236 + MIR SINE MIR 114 226 -36 338 295 0 0 chr10 97526120 97526198 -48063090 + L2 LINE L2 3186 3263 -9 389 328 103 5 chr10 97526449 97526644 -48062644 + L3b LINE CR1 1116 1329 -254 549 370 21 63 chr10 97527173 97527457 -48061831 - L2 LINE L2 -12 3260 2989 21 57 0 0 chr10 97527563 97527598 -48061690 + AT_rich Low_complexity Low_complexity 1 35 0 25 31 0 0 chr10 97527831 97527863 -48061425 + AT_rich Low_complexity Low_complexity 1 32 0 314 123 18 0 chr10 97528266 97528323 -48060965 + GA-rich Low_complexity Low_complexity 2 59 0 267 200 29 29 chr10 97528437 97528507 -48060781 + MLT1K LTR MaLR 511 580 -8 565 271 65 35 chr10 97528803 97528929 -48060359 + MIR SINE MIR 27 165 -97 1660 165 3 33 chr10 97528929 97529232 -48060056 + AluJb SINE Alu 3 296 -16 565 271 65 35 chr10 97529232 97529334 -48059954 + MIR SINE MIR 165 262 0 405 303 72 33 chr10 97530122 97530274 -48059014 + MER5A DNA MER1_type 2 159 -30 9535 145 14 0 chr10 97530869 97533621 -48055667 - L1MA1 LINE L1 0 6302 3510 266 121 138 0 chr10 97534304 97534362 -48054926 - MER114 LTR ERV -182 466 401 1452 191 35 4 chr10 97534456 97534712 -48054576 + AluJb SINE Alu 37 300 -12 869 244 114 32 chr10 97534712 97535151 -48054137 + HAL1 LINE L1 1633 2107 -400 349 262 18 48 chr10 97535402 97535570 -48053718 + HAL1 LINE L1 2328 2490 -17 212 322 33 66 chr10 97537784 97537967 -48051321 - L2 LINE L2 -391 2923 2747 1019 224 53 20 chr10 97538121 97538479 -48050809 + MER114 LTR ERV 3 372 -276 884 282 65 96 chr10 97538556 97539190 -48050098 - MER21B LTR ERV1 -149 714 101 2537 151 26 7 chr10 97540511 97540929 -48048359 - MSTB LTR MaLR 0 426 1 38397 68 6 2 chr10 97542539 97548660 -48040628 + L1PA5 LINE L1 1 6148 -6 274 300 45 5 chr10 97548665 97548885 -48040403 + L1ME LINE L1 5657 5885 -236 1279 192 82 74 chr10 97549020 97549384 -48039904 - MLT1A1 LTR MaLR -7 358 1 2191 201 24 0 chr10 97549384 97549806 -48039482 - MLT1A1-int LTR MaLR 0 1735 1304 180 388 15 60 chr10 97550663 97550737 -48038551 - L2 LINE L2 -580 2734 2658 562 206 40 0 chr10 97550737 97550863 -48038425 - MER94 DNA DNA -3 131 1 180 388 15 60 chr10 97550863 97550989 -48038299 - L2 LINE L2 -656 2658 2543 761 228 27 0 chr10 97551124 97551308 -48037980 + LTR16A LTR ERVL 261 449 -1 750 188 93 122 chr10 97552084 97552251 -48037037 - LTR37B LTR ERV1 -34 434 264 1939 165 0 46 chr10 97552251 97552602 -48036686 + MER1B DNA MER1_type 3 337 0 750 188 93 122 chr10 97552602 97552843 -48036445 - LTR37B LTR ERV1 -204 264 38 258 148 0 0 chr10 97554701 97554755 -48034533 + (TC)n Simple_repeat Simple_repeat 1 54 0 1268 262 228 10 chr10 97556298 97557003 -48032285 + L1MC4 LINE L1 6820 7678 -364 190 73 49 0 chr10 97557021 97557062 -48032226 + GA-rich Low_complexity Low_complexity 1 43 0 476 183 9 9 chr10 97557130 97557245 -48032043 + L1MC4 LINE L1 7926 8040 -2 340 172 141 0 chr10 97557685 97557749 -48031539 - MER96 DNA MER1_type? 0 175 103 202 314 69 39 chr10 97557771 97557873 -48031415 - MER5B DNA MER1_type -62 116 12 978 169 33 5 chr10 97557892 97558076 -48031212 + MER5A DNA MER1_type 1 189 0 387 197 189 31 chr10 97558918 97559045 -48030243 - MER69 DNA AcHobo 0 2526 2380 341 224 0 0 chr10 97559172 97559239 -48030049 - MER69 DNA AcHobo -2459 67 1 273 242 16 0 chr10 97559519 97559581 -48029707 - MER20B DNA MER1_type -607 176 114 528 299 85 55 chr10 97560732 97561003 -48028285 + L2 LINE L2 2989 3267 -5 249 313 75 22 chr10 97561585 97561719 -48027569 + MER5A DNA MER1_type 7 147 -42 237 271 83 62 chr10 97561902 97562046 -48027242 + LTR16A1 LTR ERVL 180 326 -131 335 300 69 10 chr10 97562046 97562302 -48026986 - LTR16A1 LTR ERVL -8 449 120 2035 163 31 38 chr10 97562360 97562735 -48026553 + MLT2D LTR ERVL 1 374 -40 557 28 14 0 chr10 97562735 97562806 -48026482 + (CA)n Simple_repeat Simple_repeat 2 73 0 2035 163 31 38 chr10 97562806 97562847 -48026441 + MLT2D LTR ERVL 374 414 0 449 296 8 0 chr10 97562876 97563001 -48026287 + LTR16A1 LTR ERVL 330 455 -2 36099 95 9 4 chr10 97563019 97569158 -48020130 - L1PA13 LINE L1 0 6163 1 241 260 65 24 chr10 97570566 97570689 -48018599 - MLT1L LTR MaLR -50 565 438 249 294 12 0 chr10 97570775 97570860 -48018428 - MLT1J LTR MaLR -331 180 95 299 280 42 17 chr10 97570877 97570995 -48018293 + MIR SINE MIR 124 244 -18 41 21 0 0 chr10 97571065 97571113 -48018175 + AT_rich Low_complexity Low_complexity 1 48 0 1480 256 134 50 chr10 97571113 97572122 -48017166 - HAL1 LINE L1 0 2507 1415 792 258 123 32 chr10 97572146 97572649 -48016639 - HAL1 LINE L1 -1466 1041 493 331 254 78 51 chr10 97573225 97573442 -48015846 - L1ME LINE L1 -313 5808 5586 329 310 16 31 chr10 97573502 97573631 -48015657 - LTR67 LTR ERVL -339 218 92 302 373 67 20 chr10 97573737 97574037 -48015251 + L2 LINE L2 1823 2136 -1178 187 295 216 21 chr10 97574794 97574984 -48014304 + L2 LINE L2 2657 2883 -431 481 270 133 47 chr10 97575693 97575904 -48013384 - MIR SINE MIR -24 238 10 2310 93 0 19 chr10 97576484 97576794 -48012494 - AluSp SINE Alu -9 304 1 33 43 0 0 chr10 97577017 97577064 -48012224 + AT_rich Low_complexity Low_complexity 1 47 0 1420 154 0 61 chr10 97577131 97577409 -48011879 + MER67D LTR ERV1 5 265 -249 847 188 62 49 chr10 97577409 97577813 -48011475 - MLT2D LTR ERVL 0 464 57 665 296 49 4 chr10 97577824 97578067 -48011221 + MER67D LTR ERV1 261 514 0 649 309 14 0 chr10 97578161 97578368 -48010920 - MIR SINE MIR 0 262 53 1257 204 39 81 chr10 97579127 97579534 -48009754 - MLT1B LTR MaLR 0 390 1 395 314 132 0 chr10 97583531 97583690 -48005598 + MIR SINE MIR 64 243 -19 1862 134 21 0 chr10 97584316 97584599 -48004689 - AluSx SINE Alu -3 309 21 471 258 72 72 chr10 97585287 97585481 -48003807 - MIR SINE MIR -37 225 32 191 400 71 7 chr10 97585485 97585625 -48003663 + L3 LINE CR1 990 1138 -439 1540 214 26 10 chr10 97586050 97586353 -48002935 + AluJb SINE Alu 1 308 -4 387 338 113 17 chr10 97586892 97587185 -48002103 + L2 LINE L2 2070 2390 -924 259 347 68 36 chr10 97587573 97587821 -48001467 + MLT1H LTR MaLR 57 312 -237 26 0 0 0 chr10 97588045 97588071 -48001217 + AT_rich Low_complexity Low_complexity 1 26 0 509 301 120 47 chr10 97588146 97588555 -48000733 - MLT1L LTR MaLR -2 613 175 34 42 0 0 chr10 97588658 97588706 -48000582 + AT_rich Low_complexity Low_complexity 1 48 0 381 184 9 18 chr10 97588721 97588741 -48000547 + GA-rich Low_complexity Low_complexity 1 20 -88 1950 156 0 19 chr10 97588741 97589055 -48000233 + AluSx SINE Alu 1 308 -4 381 184 9 18 chr10 97589055 97589143 -48000145 + GA-rich Low_complexity Low_complexity 20 108 0 194 231 0 58 chr10 97590768 97590820 -47998468 + MER5B DNA MER1_type 6 54 -124 26 0 0 0 chr10 97590820 97590846 -47998442 + AT_rich Low_complexity Low_complexity 1 26 0 463 165 205 16 chr10 97591592 97591719 -47997569 - MER5A DNA MER1_type -29 160 10 1134 223 5 5 chr10 97592444 97592668 -47996620 + MER58A DNA MER1_type 1 224 0 1139 200 36 4 chr10 97592764 97592989 -47996299 + MER46A DNA MER2_type 4 235 -1 429 343 53 10 chr10 97595292 97595499 -47993789 - MIR SINE MIR -13 249 34 222 91 0 0 chr10 97595575 97595608 -47993680 + (CA)n Simple_repeat Simple_repeat 2 34 0 499 239 18 170 chr10 97595773 97596162 -47993126 - L2 LINE L2 0 3272 2943 411 233 33 40 chr10 97596708 97596858 -47992430 - L1ME4a LINE L1 -10 6111 5963 309 385 35 6 chr10 97596877 97597051 -47992237 - L1ME4a LINE L1 -218 5903 5725 7136 204 58 88 chr10 97597830 97599631 -47989657 + MER52A LTR ERV1 1 1747 -8 686 320 40 18 chr10 97599825 97600053 -47989235 + MIR SINE MIR 30 262 0 270 116 47 0 chr10 97600375 97600418 -47988870 - AluSp SINE Alu -138 165 121 201 39 0 0 chr10 97600843 97600869 -47988419 + (GA)n Simple_repeat Simple_repeat 2 27 0 26 30 0 0 chr10 97600891 97600924 -47988364 + AT_rich Low_complexity Low_complexity 1 33 0 225 146 55 36 chr10 97600929 97600984 -47988304 - L1ME4a LINE L1 -2 6119 6064 237 222 103 32 chr10 97601162 97601288 -47988000 - L1ME LINE L1 -318 5803 5669 253 310 120 22 chr10 97601607 97601793 -47987495 - L2 LINE L2 -298 2974 2778 24 85 0 0 chr10 97602206 97602265 -47987023 + AT_rich Low_complexity Low_complexity 1 59 0 1578 183 3 36 chr10 97602431 97602574 -47986714 + AluJb SINE Alu 1 147 -165 1813 137 0 67 chr10 97602574 97602888 -47986400 + AluSx SINE Alu 1 293 -19 1578 183 3 36 chr10 97602888 97603050 -47986238 + AluJb SINE Alu 147 296 -16 581 137 0 0 chr10 97603204 97603299 -47985989 - L1PA5 LINE L1 -11 6143 6049 3401 189 39 18 chr10 97603599 97604388 -47984900 - L1MA9 LINE L1 0 6312 5507 7876 211 20 41 chr10 97604389 97604853 -47984435 - L1MA9 LINE L1 -743 5403 4931 1957 170 13 86 chr10 97604853 97605317 -47983971 + MSTB1 LTR MaLR 3 432 0 7876 211 20 41 chr10 97605317 97605697 -47983591 - L1MA9 LINE L1 -1215 4931 4545 2302 120 0 0 chr10 97605697 97606006 -47983282 + AluSg SINE Alu 1 309 -1 7876 211 20 41 chr10 97606006 97606046 -47983242 - L1MA9 LINE L1 -1601 4545 4506 1054 77 11 33 chr10 97606046 97606229 -47983059 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 7876 211 20 41 chr10 97606229 97607567 -47981721 - L1MA9 LINE L1 -1640 4506 3244 24 0 0 0 chr10 97607772 97607796 -47981492 + AT_rich Low_complexity Low_complexity 1 24 0 446 153 45 99 chr10 97609210 97609321 -47979967 + MER21B LTR ERV1 1 105 -758 368 250 0 0 chr10 97609323 97609391 -47979897 + MER21B LTR ERV1 22 89 -774 3355 219 69 17 chr10 97609394 97610174 -47979114 + MER21B LTR ERV1 43 863 0 231 356 44 0 chr10 97610238 97610328 -47978960 - MIR SINE MIR -133 129 36 308 298 84 36 chr10 97610647 97610956 -47978332 + HAL1b LINE L1 116 439 -909 726 167 23 23 chr10 97610990 97611122 -47978166 + AluJ SINE Alu 2 133 -169 22 0 0 0 chr10 97611122 97611144 -47978144 + AT_rich Low_complexity Low_complexity 1 22 0 312 296 23 0 chr10 97611144 97611232 -47978056 - L1MC4 LINE L1 -1339 6703 6614 757 224 0 7 chr10 97611237 97611409 -47977879 + AluJ SINE Alu 141 311 0 1874 234 59 46 chr10 97611410 97611982 -47977306 + L1ME1 LINE L1 5597 6333 -1 317 368 18 0 chr10 97612021 97612192 -47977096 + HAL1b LINE L1 469 642 -706 882 209 113 32 chr10 97612438 97612783 -47976505 + L1MC4a LINE L1 5945 6317 -1491 3288 98 35 4 chr10 97612885 97613365 -47975923 - LTR19B LTR ERV1 0 580 86 444 246 30 22 chr10 97613356 97613490 -47975798 + MLT1G LTR MaLR 444 578 -12 * 391 216 11 0 chr10 97613500 97613588 -47975700 + L1MC4 LINE L1 7090 7178 -864 * 12126 212 26 12 chr10 97613587 97615310 -47973978 + L1P4 LINE L1 2750 4447 -2422 2330 109 0 0 chr10 97615310 97615612 -47973676 + AluSc SINE Alu 1 302 -7 12126 212 26 12 chr10 97615612 97616051 -47973237 + L1P4 LINE L1 4447 4878 -1991 1972 132 7 17 chr10 97616051 97616346 -47972942 - AluSc SINE Alu -17 292 1 12126 212 26 12 chr10 97616346 97616506 -47972782 + L1P4 LINE L1 4878 5034 -1835 198 71 0 0 chr10 97616506 97616534 -47972754 + (CA)n Simple_repeat Simple_repeat 2 29 0 12126 212 26 12 chr10 97616534 97617705 -47971583 + L1P4 LINE L1 5034 6297 -572 3541 134 42 28 chr10 97617705 97618337 -47970951 + L1PA16 LINE L1 5522 6165 -1 352 269 56 101 chr10 97618343 97618629 -47970659 - L1MC/D LINE L1 -2221 5587 5315 1542 243 57 17 chr10 97618703 97619146 -47970142 + L1MC4 LINE L1 7171 7636 -406 2552 61 0 3 chr10 97619146 97619456 -47969832 + AluY SINE Alu 1 309 -2 1542 243 57 17 chr10 97619456 97619489 -47969799 + L1MC4 LINE L1 7636 7666 -376 430 292 47 51 chr10 97619697 97619771 -47969517 + L1M4 LINE L1 2602 2675 -3471 3640 69 0 4 chr10 97619771 97620248 -47969040 + L1PA6 LINE L1 5680 6154 0 430 292 47 51 chr10 97620248 97620625 -47968663 + L1M4 LINE L1 2675 3051 -3095 27 49 0 0 chr10 97621251 97621292 -47967996 + AT_rich Low_complexity Low_complexity 1 41 0 322 299 149 42 chr10 97621951 97622165 -47967123 + MIR SINE MIR 2 238 -24 310 250 100 50 chr10 97622834 97622954 -47966334 + L2 LINE L2 3178 3303 -10 354 353 144 12 chr10 97623044 97623217 -47966071 - L2 LINE L2 -11 3261 3066 469 271 53 53 chr10 97624220 97624482 -47964806 + MIR SINE MIR 1 262 0 286 140 20 0 chr10 97624644 97624694 -47964594 - MLT1K LTR MaLR -29 559 509 22 0 0 0 chr10 97625180 97625202 -47964086 + AT_rich Low_complexity Low_complexity 1 22 0 2276 82 0 0 chr10 97625295 97625424 -47963864 + AluSq SINE Alu 3 131 -189 198 0 0 0 chr10 97625424 97625446 -47963842 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 2276 82 0 0 chr10 97625446 97625634 -47963654 + AluSq SINE Alu 130 320 0 313 222 81 15 chr10 97625634 97625768 -47963520 - L1ME LINE L1 -682 5439 5297 23 33 0 0 chr10 97626008 97626038 -47963250 + AT_rich Low_complexity Low_complexity 1 30 0 336 299 8 34 chr10 97626137 97626254 -47963034 - L2 LINE L2 -251 3021 2908 216 343 104 20 chr10 97626375 97626626 -47962662 - L2 LINE L2 -2409 905 634 345 344 131 5 chr10 97626833 97627054 -47962234 + MIR SINE MIR 1 249 -13 395 276 270 5 chr10 97627574 97627770 -47961518 - MIR SINE MIR -13 249 2 1194 219 84 7 chr10 97627860 97628157 -47961131 - MLT2D LTR ERVL -4 410 91 475 288 37 60 chr10 97628501 97628716 -47960572 - MIR SINE MIR 0 262 53 4615 171 34 24 chr10 97629110 97630568 -47958720 - L1MB1 LINE L1 0 6404 4916 8356 53 113 6 chr10 97630571 97631716 -47957572 + L1PA3 LINE L1 4 1271 -4875 21640 30 7 0 chr10 97631738 97635105 -47954183 + L1PA3 LINE L1 2782 6155 0 6580 210 64 9 chr10 97635146 97637037 -47952251 - L1MB1 LINE L1 -1455 4927 2814 2174 261 72 16 chr10 97637075 97638118 -47951170 - L1MB1 LINE L1 -3983 2399 1216 220 236 90 22 chr10 97638982 97639071 -47950217 + L2 LINE L2 3178 3272 0 239 146 18 0 chr10 97639927 97639982 -47949306 + (TG)n Simple_repeat Simple_repeat 1 56 0 5526 141 59 36 chr10 97640059 97641177 -47948111 - Tigger3b DNA MER2_type -5 1226 83 2378 280 53 8 chr10 97641177 97642318 -47946970 + L1ME3 LINE L1 4869 6065 -97 708 216 132 0 chr10 97642329 97642542 -47946746 + L1ME3 LINE L1 5915 6155 -7 403 222 0 0 chr10 97642582 97642663 -47946625 - Tigger3b DNA MER2_type -1141 90 10 2230 81 0 34 chr10 97643787 97644083 -47945205 - AluSc SINE Alu -23 286 1 21 0 0 0 chr10 97644188 97644209 -47945079 + AT_rich Low_complexity Low_complexity 1 21 0 337 329 120 17 chr10 97644399 97644633 -47944655 - L1MC/D LINE L1 -1988 5820 5563 462 259 61 61 chr10 97645299 97645561 -47943727 + MIR SINE MIR 1 262 0 275 194 111 0 chr10 97645703 97645775 -47943513 - MLT1K LTR MaLR 0 588 509 317 314 81 35 chr10 97645967 97646139 -47943149 - MLT1K LTR MaLR -268 320 141 1978 107 7 37 chr10 97647268 97647593 -47941695 + AluSx SINE Alu 1 312 0 3484 146 22 49 chr10 97647600 97648315 -47940973 - LTR1 LTR ERV1 -89 696 1 462 243 92 92 chr10 97648534 97648851 -47940437 - L1 LINE L1 -2951 3195 2879 2679 113 0 0 chr10 97649181 97649545 -47939743 + THE1B LTR MaLR 1 364 0 1895 184 5 52 chr10 97649882 97650305 -47938983 - MER57A LTR ERV1 0 403 1 253 300 30 0 chr10 97650467 97650567 -47938721 - HAL1b LINE L1 -778 570 468 23 33 0 0 chr10 97650971 97651001 -47938287 + AT_rich Low_complexity Low_complexity 1 30 0 12211 198 16 34 chr10 97651002 97655336 -47933952 - L1PA16 LINE L1 -9 6860 2449 1436 225 0 10 chr10 97655336 97655625 -47933663 + AluJb SINE Alu 2 287 -25 12211 198 16 34 chr10 97655625 97656093 -47933195 - L1PA16 LINE L1 -4420 2449 1974 2770 13 0 0 chr10 97656093 97656394 -47932894 + AluYa5 SINE Alu 1 301 -10 12211 198 16 34 chr10 97656394 97657780 -47931508 - L1PA16 LINE L1 -4895 1974 734 1049 161 83 0 chr10 97657774 97657967 -47931321 - L1PA16 LINE L1 -6640 209 1 * 23 0 0 0 chr10 97659336 97659359 -47929929 + AT_rich Low_complexity Low_complexity 1 23 0 351 0 0 0 chr10 97659416 97659455 -47929833 + (CA)n Simple_repeat Simple_repeat 2 40 0 938 262 91 32 chr10 97659703 97660151 -47929137 - MLT1D LTR MaLR 0 467 1 353 328 47 0 chr10 97660177 97660305 -47928983 + L2 LINE L2 3180 3313 0 2001 134 108 3 chr10 97661406 97661793 -47927495 + MSTA LTR MaLR 1 428 0 282 332 62 42 chr10 97661820 97662127 -47927161 + L2 LINE L2 1384 1696 -1618 203 241 17 17 chr10 97662179 97662237 -47927051 + (CTCA)n Simple_repeat Simple_repeat 3 60 0 4806 102 19 21 chr10 97662437 97663192 -47926096 + L1PB1 LINE L1 5394 6146 -5 819 268 32 86 chr10 97663205 97663706 -47925582 + MLT1G3 LTR MaLR 16 555 0 485 191 17 9 chr10 97663993 97664108 -47925180 + MER103 DNA DNA 2 117 -49 336 268 121 42 chr10 97666136 97666326 -47922962 + L2 LINE L2 3017 3221 -92 343 293 118 17 chr10 97666650 97666937 -47922351 + L2 LINE L2 824 1139 -2175 261 271 125 31 chr10 97666944 97667040 -47922248 - MIR3 SINE MIR -36 172 68 320 307 222 0 chr10 97667054 97667207 -47922081 - MIR SINE MIR -7 255 69 311 311 9 28 chr10 97667211 97667317 -47921971 - L2 LINE L2 0 3272 3169 496 295 152 22 chr10 97667332 97667556 -47921732 - MIR SINE MIR -7 255 3 711 221 111 30 chr10 97668431 97668630 -47920658 - MER20 DNA MER1_type 0 219 5 502 274 38 59 chr10 97668630 97668816 -47920472 - MIR SINE MIR -55 207 26 288 0 0 0 chr10 97669970 97670002 -47919286 + (CAA)n Simple_repeat Simple_repeat 2 33 0 734 328 32 4 chr10 97670090 97670340 -47918948 + MIR SINE MIR 5 261 -1 2402 75 7 0 chr10 97671324 97671630 -47917658 + AluSq SINE Alu 1 308 -5 374 56 0 19 chr10 97671653 97671707 -47917581 + (GAAAA)n Simple_repeat Simple_repeat 3 55 0 562 261 171 0 chr10 97672607 97672783 -47916505 + MIR SINE MIR 57 262 0 196 237 0 0 chr10 97673086 97673124 -47916164 - L2 LINE L2 -32 3281 3244 634 296 5 23 chr10 97673169 97673385 -47915903 - Zaphod DNA AcHobo -3818 213 2 287 247 47 113 chr10 97673411 97673457 -47915831 - MIR SINE MIR -114 148 101 2166 119 6 13 chr10 97673457 97673769 -47915519 - AluSx SINE Alu -2 310 1 287 247 47 113 chr10 97673769 97673872 -47915416 - MIR SINE MIR -161 101 9 780 91 0 0 chr10 97674291 97674351 -47914937 + (TCCC)n Simple_repeat Simple_repeat 1 170 0 780 91 0 0 chr10 97674351 97674461 -47914827 + (TCCC)n Simple_repeat Simple_repeat 3 112 0 20320 153 32 35 chr10 97674650 97676952 -47912336 - L1MA3 LINE L1 0 7724 5417 2166 131 3 6 chr10 97676952 97677265 -47912023 - AluSq SINE Alu -1 312 1 20320 153 32 35 chr10 97677265 97677333 -47911955 - L1MA3 LINE L1 -2307 5417 5350 2033 133 0 48 chr10 97677333 97677648 -47911640 - AluSx SINE Alu -12 300 1 20320 153 32 35 chr10 97677648 97678058 -47911230 - L1MA3 LINE L1 -2374 5350 4940 629 116 0 11 chr10 97678058 97678153 -47911135 - AluSc SINE Alu -13 296 203 20320 153 32 35 chr10 97678153 97683014 -47906274 - L1MA3 LINE L1 -2784 4940 7 370 284 34 14 chr10 97683014 97683162 -47906126 - L2 LINE L2 -1 3312 3162 2206 171 31 38 chr10 97683391 97683583 -47905705 - MER67C LTR ERV1 0 710 518 2305 102 3 3 chr10 97683583 97683888 -47905400 + AluSc SINE Alu 1 305 -4 2206 171 31 38 chr10 97683888 97684324 -47904964 - MER67C LTR ERV1 -192 518 10 194 368 86 11 chr10 97684688 97684862 -47904426 - MIR3 SINE MIR -6 202 16 1237 170 27 36 chr10 97685155 97685379 -47903909 - AluJb SINE Alu -19 293 72 581 115 21 10 chr10 97685713 97685809 -47903479 + MER4A LTR ERV1 1 97 -567 * 1616 128 19 67 chr10 97685806 97686172 -47903116 + MER4A LTR ERV1 257 664 0 2406 92 94 15 chr10 97686174 97686578 -47902710 + MER4A-int LTR ERV1 1 436 -6162 370 130 65 22 chr10 97686849 97686941 -47902347 + MER4A-int LTR ERV1 1262 1357 -5241 3370 71 0 9 chr10 97686941 97687393 -47901895 - LTR7 LTR ERV1 -2 448 1 2385 77 45 13 chr10 97687393 97687771 -47901517 - HERVH LTR ERV1 0 7713 7324 1349 117 19 0 chr10 97687773 97687987 -47901301 - HERVH LTR ERV1 -1896 5817 5600 4069 149 0 1 chr10 97687988 97688651 -47900637 - HERVH LTR ERV1 -2564 5149 4488 3200 119 0 8 chr10 97688645 97689158 -47900130 - HERVH LTR ERV1 -3713 4000 3492 * 870 140 7 0 chr10 97689148 97689298 -47899990 - HERVH LTR ERV1 -4423 3290 3140 * 18982 100 16 13 chr10 97689277 97692262 -47897026 - HERVH LTR ERV1 -4718 2995 1 3298 64 4 13 chr10 97692264 97692716 -47896572 - LTR7 LTR ERV1 -2 448 1 818 273 28 5 chr10 97692716 97692932 -47896356 + MER4A-int LTR ERV1 1940 2160 -4171 2319 196 84 42 chr10 97692976 97693888 -47895400 + MER4A-int LTR ERV1 196 1189 -5569 3498 101 117 10 chr10 97693900 97694575 -47894713 + MER4A-int LTR ERV1 1756 2502 -4096 2163 130 14 0 chr10 97694575 97694868 -47894420 - AluSx SINE Alu -15 297 1 1084 156 147 0 chr10 97694872 97695096 -47894192 - LTR8 LTR ERV1 -434 257 1 1689 118 185 71 chr10 97695096 97695620 -47893668 + MER4A-int LTR ERV1 2737 3320 -3278 14070 110 73 17 chr10 97695624 97698157 -47891131 + MER4A-int LTR ERV1 3919 6593 -5 358 178 100 11 chr10 97698168 97698258 -47891030 + MER4A LTR ERV1 1 98 -566 1351 169 5 77 chr10 97698258 97698630 -47890658 + MER4A LTR ERV1 261 664 0 496 205 49 0 chr10 97699489 97699611 -47889677 + MER103 DNA DNA 8 135 -31 376 234 81 8 chr10 97699796 97699920 -47889368 + MER113 DNA MER1_type? 90 222 -299 2546 161 72 36 chr10 97700339 97700836 -47888452 - MLT2B2 LTR ERVL 0 515 1 355 277 69 64 chr10 97700892 97701094 -47888194 - L1MC4 LINE L1 -116 7926 7724 1000 145 120 10 chr10 97701334 97701534 -47887754 + MLT2B3 LTR ERVL 1 222 -332 26 0 0 0 chr10 97701863 97701889 -47887399 + AT_rich Low_complexity Low_complexity 1 26 0 208 328 129 35 chr10 97702463 97702579 -47886709 - MIR SINE MIR -66 142 16 196 291 122 47 chr10 97703642 97703814 -47885474 + L2 LINE L2 3128 3312 -1 533 316 42 0 chr10 97704571 97704739 -47884549 - MIR SINE MIR -86 176 2 24 77 0 0 chr10 97705485 97705537 -47883751 + AT_rich Low_complexity Low_complexity 1 52 0 1843 172 16 9 chr10 97706143 97706520 -47882768 - MLT1A1 LTR MaLR -6 359 1 437 178 93 9 chr10 97707173 97707280 -47882008 + L1MA3 LINE L1 19 134 -7431 * 13391 173 39 14 chr10 97707277 97707933 -47881355 + L1MA3 LINE L1 1105 1743 -5822 333 0 0 0 chr10 97707933 97707970 -47881318 + (GA)n Simple_repeat Simple_repeat 2 38 0 13391 173 39 14 chr10 97707970 97711311 -47877977 + L1MA3 LINE L1 1743 5206 -2359 3451 129 8 13 chr10 97711339 97712387 -47876901 + L1MA3 LINE L1 6129 7168 -555 1973 130 58 22 chr10 97712387 97712749 -47876539 + THE1C LTR MaLR 1 375 0 3030 120 99 0 chr10 97712749 97713274 -47876014 + THE1C-int LTR MaLR 1 577 -1003 1871 119 3 3 chr10 97713281 97713575 -47875713 + THE1C-int LTR MaLR 1287 1580 0 1989 113 49 23 chr10 97713575 97713913 -47875375 + THE1C LTR MaLR 1 347 -28 1683 209 64 25 chr10 97713913 97714353 -47874935 - LTR2B LTR ERV1 0 490 34 3161 110 21 37 chr10 97714400 97714971 -47874317 + L1MA3 LINE L1 7163 7724 0 1994 150 3 16 chr10 97716117 97716484 -47872804 - L1P5 LINE L1 -360 5796 5435 21 0 0 0 chr10 97717236 97717257 -47872031 + AT_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr10 97718985 97719013 -47870275 + AT_rich Low_complexity Low_complexity 1 28 0 38604 62 5 0 chr10 97719013 97724985 -47864303 - L1PA5 LINE L1 -11 6143 150 1567 57 0 26 chr10 97724985 97725212 -47864076 - pTR5 LTR ERV1 -2046 392 172 327 235 10 0 chr10 97725215 97725313 -47863975 - LTR30 LTR ERV1 -80 642 544 3767 120 102 78 chr10 97725313 97726231 -47863057 - pTR5 LTR ERV1 -413 2025 776 1063 87 0 0 chr10 97726251 97726401 -47862887 - L1P LINE L1 -5994 152 3 2884 134 23 6 chr10 97726422 97726892 -47862396 + L1PB2 LINE L1 5671 6148 -3 21 0 0 0 chr10 97726896 97726917 -47862371 + AT_rich Low_complexity Low_complexity 1 21 0 188 170 19 0 chr10 97726918 97726971 -47862317 + (TA)n Simple_repeat Simple_repeat 1 54 0 1358 247 102 2 chr10 97727007 97727400 -47861888 - MLT2B1 LTR ERVL -68 452 21 27 29 0 0 chr10 97728220 97728254 -47861034 + AT_rich Low_complexity Low_complexity 1 34 0 192 286 137 48 chr10 97728537 97728705 -47860583 + L2 LINE L2 2297 2479 -835 786 354 5 68 chr10 97728766 97729161 -47860127 + L2 LINE L2 2903 3272 0 2401 125 28 14 chr10 97729398 97729757 -47859531 + THE1B LTR MaLR 1 364 0 259 326 139 59 chr10 97732759 97733047 -47856241 + L2 LINE L2 3003 3313 0 356 207 14 69 chr10 97733632 97733777 -47855511 + MER113 DNA MER1_type? 7 143 -378 463 350 29 36 chr10 97735146 97735426 -47853862 + L2 LINE L2 3032 3309 -4 249 292 19 106 chr10 97735891 97736052 -47853236 - MIR SINE MIR -42 220 74 287 384 15 8 chr10 97736647 97736780 -47852508 + MIR3 SINE MIR 66 199 -9 1501 169 188 6 chr10 97737184 97737546 -47851742 + MSTA LTR MaLR 1 428 0 3848 165 26 4 chr10 97738245 97738979 -47850309 - L1MB4 LINE L1 0 6180 5431 23 33 0 0 chr10 97739395 97739425 -47849863 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr10 97739562 97739590 -47849698 + AT_rich Low_complexity Low_complexity 1 28 0 2630 182 57 58 chr10 97741092 97741271 -47848017 + LTR9B LTR ERV1 7 185 -459 2050 89 50 14 chr10 97741271 97741553 -47847735 + AluY SINE Alu 11 302 -9 2630 182 57 58 chr10 97741553 97742010 -47847278 + LTR9B LTR ERV1 185 642 -2 634 192 56 16 chr10 97742101 97742262 -47847026 + HUERS-P3 LTR ERV1 411 559 -6859 5869 182 31 17 chr10 97742268 97744095 -47845193 + HUERS-P3 LTR ERV1 747 2884 -5318 1782 216 5 30 chr10 97744092 97744495 -47844793 + HUERS-P3 LTR ERV1 6520 6912 -2007 * 428 218 0 1 chr10 97744506 97744608 -47844680 + HUERS-P3 LTR ERV1 6846 6934 -484 712 178 18 12 chr10 97744628 97744811 -47844477 + HUERS-P3 LTR ERV1 3754 4320 -560 1142 194 19 9 chr10 97745110 97745326 -47843962 + HUERS-P3 LTR ERV1 8702 8919 0 2528 196 56 38 chr10 97745332 97745959 -47843329 + LTR9B LTR ERV1 7 644 0 219 298 130 53 chr10 97746470 97746601 -47842687 + MIR3 SINE MIR 10 150 -58 25 0 0 0 chr10 97746811 97746836 -47842452 + AT_rich Low_complexity Low_complexity 1 25 0 396 319 42 88 chr10 97747292 97747577 -47841711 + L2 LINE L2 2995 3266 -6 399 329 14 7 chr10 97748624 97748764 -47840524 + HsTC2 DNA Tc2 1 141 -1757 445 122 27 0 chr10 97748781 97748855 -47840433 + HsTC2 DNA Tc2 1281 1356 -542 263 194 0 65 chr10 97748871 97748964 -47840324 + L1MB8 LINE L1 5923 6009 -169 894 169 26 11 chr10 97748965 97749154 -47840134 + L1MB8 LINE L1 5981 6172 -6 344 222 201 14 chr10 97749199 97749343 -47839945 + HsTC2 DNA Tc2 1574 1744 -154 396 243 0 47 chr10 97749555 97749662 -47839626 - LTR33 LTR ERVL -308 213 112 5341 210 35 40 chr10 97749682 97750762 -47838526 - Charlie1a DNA MER1_type -1311 1450 379 846 189 13 19 chr10 97750762 97750921 -47838367 - FAM SINE Alu -17 158 1 5341 210 35 40 chr10 97750921 97751289 -47837999 - Charlie1a DNA MER1_type -2382 379 10 261 157 26 64 chr10 97751440 97751547 -47837741 + HsTC2 DNA Tc2 1788 1893 -5 222 91 0 0 chr10 97752525 97752558 -47836730 + (TCTG)n Simple_repeat Simple_repeat 4 36 0 415 293 134 0 chr10 97752787 97752944 -47836344 + MIR SINE MIR 45 222 -40 22 35 0 0 chr10 97755157 97755186 -47834102 + AT_rich Low_complexity Low_complexity 1 29 0 218 277 234 0 chr10 97755688 97755829 -47833459 + MIR SINE MIR 25 198 -64 201 167 0 0 chr10 97755999 97756035 -47833253 + T-rich Low_complexity Low_complexity 1 36 0 2196 131 0 6 chr10 97757425 97757738 -47831550 - AluSx SINE Alu -1 311 1 462 261 58 5 chr10 97758018 97758225 -47831063 + L1ME LINE L1 5562 5779 -342 268 158 108 58 chr10 97758360 97758480 -47830808 + L1ME4a LINE L1 5985 6110 -11 29 28 0 0 chr10 97758690 97758726 -47830562 + AT_rich Low_complexity Low_complexity 1 36 0 40412 38 22 1 chr10 97759373 97765401 -47823887 - L1PA3 LINE L1 0 6155 2 23 0 0 0 chr10 97766690 97766713 -47822575 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr10 97767566 97767588 -47821700 + AT_rich Low_complexity Low_complexity 1 22 0 315 278 0 14 chr10 97767593 97767665 -47821623 - L2 LINE L2 -6 3266 3196 194 352 0 0 chr10 97768515 97768569 -47820719 - MER5A DNA MER1_type 0 189 136 325 264 40 8 chr10 97768917 97769042 -47820246 - L1MA8 LINE L1 0 6291 6163 2045 128 14 7 chr10 97769253 97769550 -47819738 + AluSx SINE Alu 1 299 -13 705 138 0 215 chr10 97769636 97769882 -47819406 - 7SK RNA RNA 0 193 1 6042 128 13 42 chr10 97770664 97772667 -47816621 - L1MA1 LINE L1 0 6302 4354 1331 139 27 5 chr10 97774099 97774322 -47814966 - L1PA15 LINE L1 -1 6164 5937 249 291 19 10 chr10 97774587 97774690 -47814598 - MLT1I LTR MaLR 0 409 306 578 308 102 18 chr10 97774856 97775190 -47814098 - MLT1I LTR MaLR -47 362 1 2083 128 4 0 chr10 97775407 97775688 -47813600 - AluSx SINE Alu -30 282 1 278 290 110 0 chr10 97776623 97776723 -47812565 - MIR SINE MIR -21 241 131 2210 105 79 18 chr10 97777372 97777715 -47811573 + THE1B LTR MaLR 1 364 0 216 311 56 11 chr10 97777718 97777808 -47811480 - MIR3 SINE MIR -10 198 105 460 324 14 24 chr10 97778552 97778759 -47810529 + MIR SINE MIR 3 207 -55 461 316 96 41 chr10 97778769 97779037 -47810251 + MLT1G LTR MaLR 2 309 -246 459 52 0 0 chr10 97779037 97779095 -47810193 + (GA)n Simple_repeat Simple_repeat 1 58 0 461 316 96 41 chr10 97779095 97779294 -47809994 + MLT1G LTR MaLR 309 495 -60 292 286 171 0 chr10 97779361 97779466 -47809822 - MIR SINE MIR -38 224 102 814 300 55 0 chr10 97779655 97779962 -47809326 - MLT1H LTR MaLR -224 325 2 434 290 0 0 chr10 97779962 97780069 -47809219 - MIR SINE MIR -154 108 2 372 273 11 0 chr10 97780183 97780283 -47809005 + MIR SINE MIR 52 153 -55 467 294 116 72 chr10 97782423 97782716 -47806572 - L2 LINE L2 0 3313 3008 253 204 0 0 chr10 97782783 97782832 -47806456 + AluJ/monomer SINE Alu 3 51 -252 1107 156 0 0 chr10 97782889 97783069 -47806219 + MSTA LTR MaLR 1 180 -248 481 266 8 0 chr10 97783073 97783197 -47806091 - MER58A DNA MER1_type 0 125 1 461 205 76 58 chr10 97783699 97783870 -47805418 - LTR33A LTR ERVL -60 463 290 2484 106 0 24 chr10 97784205 97784583 -47804705 - L1PB1 LINE L1 -1 6150 5782 326 221 0 0 chr10 97784588 97784656 -47804632 + L1MC4 LINE L1 6636 6703 -1339 354 195 0 0 chr10 97784661 97784738 -47804550 + (TA)n Simple_repeat Simple_repeat 2 78 0 714 102 0 62 chr10 97784741 97784869 -47804419 - L1P5 LINE L1 -360 5791 5672 222 156 0 0 chr10 97785281 97785326 -47803962 + (CA)n Simple_repeat Simple_repeat 2 46 0 186 363 106 22 chr10 97786513 97786692 -47802596 + L3 LINE CR1 1371 1564 -13 13298 37 0 0 chr10 97788439 97790813 -47798475 - L1PA4 LINE L1 0 6155 3779 10568 27 0 0 chr10 97790813 97792101 -47797187 + L1PA4 LINE L1 2491 3778 -2368 231 200 0 0 chr10 97792238 97792288 -47797000 + (TG)n Simple_repeat Simple_repeat 1 50 0 249 276 0 0 chr10 97792606 97792664 -47796624 + MLT1I LTR MaLR 91 148 -261 279 306 73 24 chr10 97792764 97792888 -47796400 + MLT1J2 LTR MaLR 263 392 -58 249 268 18 0 chr10 97793125 97793181 -47796107 + L2 LINE L2 3250 3306 -7 182 309 0 18 chr10 97793227 97793282 -47796006 - L2 LINE L2 -1 3271 3218 247 227 8 31 chr10 97793486 97793614 -47795674 + CT-rich Low_complexity Low_complexity 1 125 0 1660 172 18 97 chr10 97793698 97793772 -47795516 + MSTD LTR MaLR 3 81 -315 2134 107 0 7 chr10 97793772 97794062 -47795226 - AluSg SINE Alu -11 299 12 1660 172 18 97 chr10 97794062 97794345 -47794943 + MSTD LTR MaLR 81 327 -69 2216 140 6 6 chr10 97794345 97794688 -47794600 - MER61A LTR ERV1 0 343 1 1660 172 18 97 chr10 97794688 97794730 -47794558 + MSTD LTR MaLR 327 371 -25 418 375 42 19 chr10 97796377 97796593 -47792695 - MIR SINE MIR -6 256 36 415 317 7 0 chr10 97796593 97796738 -47792550 - LTR16C LTR ERVL 0 491 346 1468 168 57 66 chr10 97797412 97797788 -47791500 - THE1C LTR MaLR 0 365 1 487 29 14 14 chr10 97800545 97800615 -47788673 + (TCTA)n Simple_repeat Simple_repeat 4 73 0 26 0 0 0 chr10 97800949 97800975 -47788313 + AT_rich Low_complexity Low_complexity 1 26 0 1108 181 14 32 chr10 97801745 97801961 -47787327 + AluJo SINE Alu 1 212 -100 24 0 0 0 chr10 97801969 97801993 -47787295 + AT_rich Low_complexity Low_complexity 1 24 0 2972 78 78 0 chr10 97801993 97802364 -47786924 + MLT2A1 LTR ERVL 5 412 -32 273 29 0 0 chr10 97802364 97802398 -47786890 + (TA)n Simple_repeat Simple_repeat 2 35 0 2972 78 78 0 chr10 97802398 97802434 -47786854 + MLT2A1 LTR ERVL 412 444 0 306 206 0 0 chr10 97802438 97802506 -47786782 + (TG)n Simple_repeat Simple_repeat 2 69 0 1804 216 49 18 chr10 97803718 97804171 -47785117 + MLT1C LTR MaLR 1 467 0 311 253 109 50 chr10 97804538 97804759 -47784529 + MER112 DNA MER1_type 10 243 -17 25 0 0 0 chr10 97805504 97805529 -47783759 + AT_rich Low_complexity Low_complexity 1 25 0 3076 93 21 0 chr10 97808350 97808804 -47780484 + L1PA10 LINE L1 5709 6171 0 546 345 47 91 chr10 97808912 97809703 -47779585 + L2 LINE L2 2521 3272 0 632 305 43 35 chr10 97810406 97810688 -47778600 - MLT1I LTR MaLR -26 383 100 2238 140 22 51 chr10 97810688 97811103 -47778185 + MER57A LTR ERV1 1 403 0 248 295 33 0 chr10 97811433 97811494 -47777794 + MIR SINE MIR 65 127 -81 339 255 55 90 chr10 97811693 97811838 -47777450 + MLT1J2 LTR MaLR 281 420 -30 299 256 58 0 chr10 97811882 97811968 -47777320 + MIR SINE MIR 160 250 -12 300 297 115 7 chr10 97812526 97812674 -47776614 - L1ME4a LINE L1 -2 6119 5956 477 276 88 17 chr10 97812678 97812975 -47776313 - L1ME4a LINE L1 -237 5884 5567 272 342 51 0 chr10 97814355 97814434 -47774854 - L2 LINE L2 -35 3237 3155 183 162 0 0 chr10 97815332 97815369 -47773919 + A-rich Low_complexity Low_complexity 1 37 0 26 50 0 0 chr10 97815386 97815426 -47773862 + AT_rich Low_complexity Low_complexity 1 40 0 2394 222 50 11 chr10 97815456 97816078 -47773210 + L1ME1 LINE L1 5516 6161 -5 315 290 43 22 chr10 97816111 97816249 -47773039 + L1MC5 LINE L1 7711 7851 -110 669 323 65 19 chr10 97816764 97816943 -47772345 - MLT1J2 LTR MaLR -7 443 274 3572 116 6 33 chr10 97816943 97817485 -47771803 - MER1A DNA MER1_type 0 527 1 669 323 65 19 chr10 97817485 97817673 -47771615 - MLT1J2 LTR MaLR -176 274 59 2447 56 10 7 chr10 97817704 97818008 -47771280 - AluY SINE Alu -4 307 3 273 309 24 0 chr10 97818116 97818200 -47771088 - MER5B DNA MER1_type -73 105 20 433 217 63 56 chr10 97818335 97818478 -47770810 - LTR16A LTR ERVL -6 444 301 410 320 107 11 chr10 97818776 97818954 -47770334 + MIR SINE MIR 12 206 -56 286 143 0 0 chr10 97819397 97819439 -47769849 + 5S rRNA rRNA 1 42 -79 421 239 108 23 chr10 97820040 97820170 -47769118 - MIR SINE MIR -48 214 74 241 238 38 0 chr10 97820185 97820265 -47769023 + (CATATA)n Simple_repeat Simple_repeat 2 84 0 266 263 75 0 chr10 97820359 97820439 -47768849 - MER91C DNA MER1_type -19 121 36 198 297 121 0 chr10 97821983 97822074 -47767214 - L2 LINE L2 0 3272 3171 1642 243 33 55 chr10 97822406 97822920 -47766368 + MLT1D LTR MaLR 3 505 0 469 285 118 56 chr10 97822984 97823289 -47765999 - MLT1K LTR MaLR -116 472 149 1650 227 48 24 chr10 97824369 97824823 -47764465 - MLT1C LTR MaLR -2 465 1 2828 190 40 21 chr10 97824984 97825559 -47763729 + MER90 LTR ERV1 28 613 -1 2068 136 35 37 chr10 97827127 97827503 -47761785 - THE1C LTR MaLR 0 375 1 1743 185 21 0 chr10 97828037 97828367 -47760921 - L1MC1 LINE L1 -18 6315 5979 23 0 0 0 chr10 97828861 97828884 -47760404 + AT_rich Low_complexity Low_complexity 1 23 0 1196 308 28 21 chr10 97828918 97829385 -47759903 + LTR38 LTR ERV1 87 556 0 315 281 56 56 chr10 97829720 97829880 -47759408 + MIR SINE MIR 53 212 -50 1186 230 184 8 chr10 97829938 97830405 -47758883 + MLT1F LTR MaLR 6 540 -2 297 207 46 0 chr10 97830649 97830736 -47758552 - MER103 DNA DNA -7 159 69 952 190 91 20 chr10 97830771 97831095 -47758193 + MSTD LTR MaLR 1 396 0 513 0 0 0 chr10 97831507 97831564 -47757724 + (TA)n Simple_repeat Simple_repeat 2 58 0 646 310 37 33 chr10 97832049 97832291 -47756997 - MIR SINE MIR -12 250 8 1113 183 27 71 chr10 97832598 97832934 -47756354 + MER33 DNA MER1_type 1 315 -9 712 216 98 20 chr10 97833395 97833649 -47755639 - L1ME LINE L1 -3394 2686 2413 5622 150 19 16 chr10 97833658 97834922 -47754366 - L1MA8 LINE L1 0 6291 5029 743 234 37 23 chr10 97834963 97835312 -47753976 - L1ME LINE L1 -3849 2231 1909 351 159 35 72 chr10 97835317 97835403 -47753885 - THE1B LTR MaLR -8 420 274 14480 200 18 7 chr10 97835404 97840544 -47748744 + L1PB1 LINE L1 1099 6183 -684 297 0 0 0 chr10 97840544 97840577 -47748711 + (TG)n Simple_repeat Simple_repeat 2 34 0 252 0 0 0 chr10 97840576 97840604 -47748684 + (TA)n Simple_repeat Simple_repeat 1 28 0 * 14480 200 18 7 chr10 97840577 97840964 -47748324 + L1PB1 LINE L1 6183 6867 0 23 0 0 0 chr10 97840964 97840987 -47748301 + AT_rich Low_complexity Low_complexity 1 23 0 2302 108 0 0 chr10 97840993 97841300 -47747988 - THE1B LTR MaLR -57 307 1 213 65 0 0 chr10 97841353 97841384 -47747904 + (CA)n Simple_repeat Simple_repeat 2 32 0 1084 307 68 4 chr10 97841448 97841975 -47747313 - L1ME LINE L1 -4462 1799 1239 387 270 63 81 chr10 97841975 97842149 -47747139 + LTR41 LTR ERVL 1 171 -602 276 229 34 58 chr10 97842635 97842791 -47746497 + LTR50 LTR ERVL 619 791 -4 922 247 36 34 chr10 97842815 97843341 -47745947 - L1ME LINE L1 -4913 1167 627 309 261 70 0 chr10 97843348 97843463 -47745825 - L1ME LINE L1 -5583 487 365 1347 42 0 0 chr10 97844031 97844198 -47745090 + L1PA4 LINE L1 5989 6155 0 241 256 26 0 chr10 97845119 97845197 -47744091 + MER116 DNA Mariner 1 80 0 3824 189 30 33 chr10 97845244 97846664 -47742624 + L1MB4 LINE L1 4757 6174 -6 283 257 38 57 chr10 97847289 97847394 -47741894 + MIR SINE MIR 89 191 -71 486 287 94 88 chr10 97847915 97848508 -47740780 + HAL1 LINE L1 795 1391 -1116 277 82 41 0 chr10 97848512 97848561 -47740727 + (TAGA)n Simple_repeat Simple_repeat 2 52 0 264 278 111 9 chr10 97848651 97848759 -47740529 + HAL1 LINE L1 1519 1637 -870 29 0 0 0 chr10 97848900 97848929 -47740359 + AT_rich Low_complexity Low_complexity 1 29 0 352 293 167 36 chr10 97849339 97849674 -47739614 + L1M4 LINE L1 2222 2600 -3546 987 175 100 7 chr10 97849750 97850030 -47739258 + MER33 DNA MER1_type 19 324 0 500 276 179 10 chr10 97850691 97850887 -47738401 + MIR SINE MIR 7 235 -27 1790 174 178 25 chr10 97853211 97853649 -47735639 + MLT1D LTR MaLR 1 505 0 421 281 82 0 chr10 97854618 97854753 -47734535 - MIR SINE MIR -38 224 79 288 113 0 56 chr10 97855472 97855543 -47733745 + (TTCC)n Simple_repeat Simple_repeat 1 67 0 569 210 8 0 chr10 97856414 97856533 -47732755 + L1MA4 LINE L1 5909 6028 -272 40145 39 24 2 chr10 97856533 97862555 -47726733 + L1PA3 LINE L1 1 6155 0 1349 170 15 0 chr10 97862567 97862837 -47726451 + L1MA4 LINE L1 6015 6288 -12 3961 126 19 13 chr10 97863018 97863643 -47725645 + L1PA16 LINE L1 5529 6157 -9 793 288 92 2 chr10 97864101 97864490 -47724798 - LTR33 LTR ERVL -2 519 12 447 221 53 0 chr10 97865509 97865604 -47723684 - L2 LINE L2 -7 3306 3207 378 297 108 14 chr10 97865759 97865943 -47723345 - MLT1L LTR MaLR -58 547 275 2174 84 3 7 chr10 97866232 97866516 -47722772 - AluSc SINE Alu -26 283 1 820 144 0 0 chr10 97866730 97866848 -47722440 + FLAM_C SINE Alu 1 118 -25 215 31 31 0 chr10 97866848 97866880 -47722408 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 2326 97 7 0 chr10 97866969 97867267 -47722021 + AluSx SINE Alu 1 300 -12 1840 161 0 20 chr10 97867472 97867771 -47721517 - AluJb SINE Alu -16 296 4 21 57 0 0 chr10 97867991 97868026 -47721262 + AT_rich Low_complexity Low_complexity 1 35 0 1745 156 20 7 chr10 97868651 97868946 -47720342 + AluSg SINE Alu 3 301 -9 2215 84 39 0 chr10 97869235 97869520 -47719768 + AluY SINE Alu 1 296 -15 1899 161 0 13 chr10 97869712 97870017 -47719271 + AluJb SINE Alu 1 301 -11 1136 160 224 41 chr10 97870206 97870568 -47718720 - MSTC LTR MaLR 0 428 1 240 219 35 83 chr10 97870716 97870824 -47718464 + L1MC4 LINE L1 5269 5368 -2440 2247 82 3 20 chr10 97870824 97871127 -47718161 - AluSq SINE Alu -15 298 1 240 219 35 83 chr10 97871127 97871187 -47718101 + L1MC4 LINE L1 5368 5429 -2379 313 284 63 8 chr10 97871234 97871361 -47717927 + L1MC4 LINE L1 6933 7066 -976 3634 158 32 21 chr10 97871537 97872257 -47717031 - Tigger1 DNA MER2_type -1669 749 22 796 207 96 36 chr10 97872260 97872594 -47716694 - L1M4 LINE L1 -1328 4818 4465 861 193 165 68 chr10 97872694 97873016 -47716272 + MLT1A1 LTR MaLR 1 353 -12 28 0 0 0 chr10 97873152 97873180 -47716108 + AT_rich Low_complexity Low_complexity 1 28 0 2067 139 3 7 chr10 97873272 97873575 -47715713 - AluSx SINE Alu -9 303 2 271 261 135 18 chr10 97876459 97876570 -47712718 - L2 LINE L2 0 3272 3149 296 146 0 0 chr10 97876719 97876767 -47712521 - L1MD3 LINE L1 -218 7777 7730 2023 130 0 11 chr10 97876999 97877325 -47711963 - AluSx SINE Alu 0 323 1 272 307 31 8 chr10 97877334 97877461 -47711827 - MER103 DNA DNA -1 165 36 541 232 57 11 chr10 97877472 97877649 -47711639 + MER113 DNA MER1_type? 9 193 -328 2496 59 0 3 chr10 97878050 97878353 -47710935 - AluY SINE Alu -9 302 1 1300 140 0 0 chr10 97878863 97879042 -47710246 - AluSp SINE Alu -134 179 1 1410 190 11 121 chr10 97879047 97879525 -47709763 - L1ME1 LINE L1 -330 5836 5412 2500 88 3 25 chr10 97879527 97879707 -47709581 + L1PB1 LINE L1 5794 5963 -188 2706 10 0 3 chr10 97879707 97880008 -47709280 + AluYa5 SINE Alu 1 300 -11 2500 88 3 25 chr10 97880008 97880192 -47709096 + L1PB1 LINE L1 5963 6150 -1 2192 93 10 7 chr10 97880199 97880490 -47708798 + AluSq SINE Alu 1 292 -21 2304 112 3 0 chr10 97880711 97881015 -47708273 + AluSc SINE Alu 1 305 -4 827 179 0 0 chr10 97881030 97881153 -47708135 + FLAM_C SINE Alu 3 125 -18 342 215 21 21 chr10 97881264 97881357 -47707931 + L1M4 LINE L1 4532 4624 -1522 377 115 0 0 chr10 97881858 97881919 -47707369 + L1MB8 LINE L1 6110 6170 -8 1758 132 0 26 chr10 97882028 97882293 -47706995 - AluSx SINE Alu -20 292 35 2077 93 7 4 chr10 97882578 97882847 -47706441 - AluSx SINE Alu -14 298 29 2509 62 6 0 chr10 97882847 97883184 -47706104 + LTR14A LTR ERVK 6 344 0 252 122 0 0 chr10 97883184 97883225 -47706063 - AluSx SINE Alu -259 41 1 497 249 40 43 chr10 97883230 97883483 -47705805 - L1ME4a LINE L1 -260 5861 5610 264 149 43 0 chr10 97883502 97883549 -47705739 - AluSx SINE Alu -249 50 2 1193 145 5 31 chr10 97883731 97883924 -47705364 - AluSx SINE Alu -123 189 2 24 0 0 0 chr10 97884003 97884027 -47705261 + AT_rich Low_complexity Low_complexity 1 24 0 487 79 0 0 chr10 97884030 97884093 -47705195 + Alu SINE Alu 1 63 -247 231 137 0 55 chr10 97884093 97884166 -47705122 + (TA)n Simple_repeat Simple_repeat 1 69 0 928 135 15 0 chr10 97884255 97884388 -47704900 + AluJb SINE Alu 1 135 -177 1730 96 4 13 chr10 97884388 97884618 -47704670 + AluSx SINE Alu 2 229 -83 23 0 0 0 chr10 97884752 97884775 -47704513 + AT_rich Low_complexity Low_complexity 1 23 0 2160 113 3 0 chr10 97885556 97885840 -47703448 + AluSg SINE Alu 1 285 -25 352 248 40 27 chr10 97886401 97886550 -47702738 - L1ME LINE L1 -442 5679 5529 2299 75 4 0 chr10 97886614 97886930 -47702358 + AluSc SINE Alu 3 319 0 603 310 71 35 chr10 97887680 97888019 -47701269 - HAL1b LINE L1 -954 394 44 23 78 0 0 chr10 97888078 97888129 -47701159 + AT_rich Low_complexity Low_complexity 1 51 0 2288 67 0 0 chr10 97888140 97888464 -47700824 - AluY SINE Alu 0 324 1 215 343 0 27 chr10 97890301 97890374 -47698914 - L3 LINE CR1 -1322 255 185 268 305 90 17 chr10 97890592 97890769 -47698519 + L2 LINE L2 654 843 -2471 1789 118 4 0 chr10 97891277 97891522 -47697766 - AluSx SINE Alu -64 248 3 21 36 0 0 chr10 97891584 97891612 -47697676 + AT_rich Low_complexity Low_complexity 1 28 0 194 372 11 21 chr10 97891642 97891736 -47697552 + L2 LINE L2 3163 3255 -17 189 260 100 0 chr10 97891780 97891830 -47697458 - MER5A DNA MER1_type -1 188 134 233 310 56 0 chr10 97891993 97892064 -47697224 - MIR SINE MIR 0 262 188 23 0 0 0 chr10 97892609 97892632 -47696656 + AT_rich Low_complexity Low_complexity 1 23 0 300 242 118 73 chr10 97892906 97893084 -47696204 + MIR SINE MIR 2 187 -75 246 243 9 117 chr10 97893680 97893791 -47695497 - MIR SINE MIR -50 212 114 693 307 117 15 chr10 97893800 97894142 -47695146 - MLT1I LTR MaLR -17 392 16 2018 301 42 45 chr10 97894298 97895204 -47694084 - L2 LINE L2 -2409 905 3 259 219 110 0 chr10 97895281 97895354 -47693934 + L2 LINE L2 3186 3266 -6 212 365 32 0 chr10 97895944 97896007 -47693281 + L3 LINE CR1 1491 1555 -22 655 186 70 64 chr10 97896087 97896259 -47693029 + MLT1B LTR MaLR 1 173 -217 1237 162 0 25 chr10 97896260 97896495 -47692793 - L1 LINE L1 -857 5289 5061 824 114 27 67 chr10 97896512 97896661 -47692627 - FRAM SINE Alu -14 162 20 1448 152 40 40 chr10 97896711 97897033 -47692255 + L1MA9 LINE L1 5986 6307 -5 486 220 147 13 chr10 97897054 97897209 -47692079 + MLT1B LTR MaLR 156 372 -18 22 35 0 0 chr10 97897332 97897361 -47691927 + AT_rich Low_complexity Low_complexity 1 29 0 413 300 82 36 chr10 97898445 97898665 -47690623 + MIR SINE MIR 31 260 -2 830 328 41 32 chr10 97899072 97899533 -47689755 - MLT1J LTR MaLR -45 466 2 436 322 51 6 chr10 97899626 97899803 -47689485 + MIR SINE MIR 17 201 -61 437 233 34 68 chr10 97900593 97900739 -47688549 + MIR SINE MIR 57 197 -65 1665 184 33 14 chr10 97900953 97901317 -47687971 + L1MB1 LINE L1 5798 6168 0 2185 130 28 0 chr10 97901317 97901672 -47687616 + L1MB3 LINE L1 5813 6183 0 2780 149 11 7 chr10 97901998 97902453 -47686835 + MSTB2 LTR MaLR 1 457 0 22 0 0 0 chr10 97902887 97902909 -47686379 + AT_rich Low_complexity Low_complexity 1 22 0 871 294 94 71 chr10 97903194 97903774 -47685514 + L1MEd LINE L1 54 654 -5465 7779 153 22 1 chr10 97903774 97904891 -47684397 + L1PA10 LINE L1 4054 5221 -947 207 0 0 0 chr10 97904891 97904914 -47684374 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 7779 153 22 1 chr10 97904914 97905879 -47683409 + L1PA10 LINE L1 5221 6164 -4 871 294 94 71 chr10 97905879 97905999 -47683289 + L1MEd LINE L1 654 770 -5349 1402 222 126 31 chr10 97906131 97906704 -47682584 + L1MEd LINE L1 2200 2826 -3303 475 249 47 77 chr10 97906722 97906757 -47682531 + MER5B DNA MER1_type 9 44 -134 1377 234 136 58 chr10 97906757 97906794 -47682494 - MLT1F LTR MaLR -2 540 507 2302 107 0 22 chr10 97906794 97907113 -47682175 + AluSx SINE Alu 1 312 0 1377 234 136 58 chr10 97907113 97907576 -47681712 - MLT1F LTR MaLR -35 507 1 475 249 47 77 chr10 97907576 97907709 -47681579 + MER5B DNA MER1_type 44 172 -6 309 193 59 13 chr10 97907909 97907994 -47681294 + MER5B DNA MER1_type 94 175 -3 198 401 14 14 chr10 97908685 97908827 -47680461 + MIR3 SINE MIR 40 181 -27 27 0 0 0 chr10 97909185 97909212 -47680076 + AT_rich Low_complexity Low_complexity 1 27 0 313 225 155 47 chr10 97910464 97910593 -47678695 + L1ME4a LINE L1 5974 6116 -5 287 229 229 33 chr10 97910668 97910790 -47678498 + MIR SINE MIR 73 218 -44 180 324 15 15 chr10 97911015 97911083 -47678205 - MIR3 SINE MIR -21 187 120 645 216 114 13 chr10 97912309 97912536 -47676752 + MER5C DNA MER1_type 60 309 -15 268 193 145 24 chr10 97912593 97912676 -47676612 - MER103 DNA DNA -52 114 22 247 179 141 26 chr10 97913577 97913655 -47675633 + L1ME4a LINE L1 5986 6072 -49 236 254 188 29 chr10 97914830 97914968 -47674320 + L2 LINE L2 3130 3289 -24 310 373 127 54 chr10 97915614 97915984 -47673304 + L2 LINE L2 2860 3256 -16 276 77 0 0 chr10 97915985 97916024 -47673264 + (TGAA)n Simple_repeat Simple_repeat 3 41 0 418 252 0 91 chr10 97916357 97916500 -47672788 - MIR SINE MIR -92 170 41 1625 192 11 0 chr10 97917021 97917297 -47671991 + AluJo SINE Alu 1 279 -33 282 156 0 0 chr10 97917425 97917470 -47671818 - MSTD LTR MaLR -1 373 329 730 195 23 0 chr10 97917474 97917602 -47671686 - FLAM_C SINE Alu -10 133 3 815 200 138 115 chr10 97917605 97917828 -47671460 - MSTD LTR MaLR -43 353 117 2051 123 0 3 chr10 97917828 97918141 -47671147 + AluSx SINE Alu 1 312 0 815 200 138 115 chr10 97918141 97918256 -47671032 - MSTD LTR MaLR -279 117 6 2320 100 0 0 chr10 97922351 97922652 -47666636 + AluSc SINE Alu 1 301 -8 191 364 101 0 chr10 97923449 97923548 -47665740 - MIR SINE MIR -55 153 45 2898 9 0 0 chr10 97923611 97923927 -47665361 - AluYb8 SINE Alu -2 316 1 3789 140 18 28 chr10 97924980 97925703 -47663585 - L1MA8 LINE L1 0 6291 5576 7152 50 5 1 chr10 97926515 97927759 -47661529 + L1PA6 LINE L1 4906 6152 -2 414 241 18 42 chr10 97928036 97928165 -47661123 - MER5A DNA MER1_type 0 178 51 236 318 20 60 chr10 97928057 97928208 -47661080 + MER5A DNA MER1_type 35 179 -10 * 348 200 160 10 chr10 97928307 97928407 -47660881 - L2 LINE L2 -2 3311 3197 298 243 180 9 chr10 97928928 97929039 -47660249 + LTR67 LTR ERVL 427 556 -1 495 363 58 0 chr10 97930140 97930330 -47658958 + ERVL LTR ERVL 1960 2160 -3604 483 179 0 0 chr10 97930334 97930418 -47658870 - MLT1A1 LTR MaLR 0 365 282 1748 151 7 11 chr10 97930546 97930831 -47658457 - MLT1A1 LTR MaLR -81 284 1 532 314 155 29 chr10 97930834 97931248 -47658040 + ERVL LTR ERVL 2164 2629 -3135 1066 320 101 23 chr10 97931424 97932108 -47657180 + ERVL LTR ERVL 2827 3563 -2201 517 216 23 31 chr10 97932231 97932365 -47656923 - MER69A DNA AcHobo -45 132 1 979 263 110 9 chr10 97932502 97932821 -47656467 + ERVL LTR ERVL 4008 4358 -1406 264 257 0 40 chr10 97933179 97933253 -47656035 + Tigger5 DNA MER2_type 2246 2316 -7 470 227 0 0 chr10 97933277 97933365 -47655923 - Tigger5 DNA MER2_type -2235 88 1 392 195 23 23 chr10 97933376 97933463 -47655825 + Tigger5 DNA MER2_type 2237 2323 0 321 187 0 0 chr10 97933470 97933545 -47655743 + GA-rich Low_complexity Low_complexity 2 76 0 1897 231 74 35 chr10 97935470 97935954 -47653334 - MLT1E LTR MaLR -90 503 1 272 235 157 9 chr10 97937034 97937149 -47652139 - MIR SINE MIR -12 250 119 186 354 10 31 chr10 97937193 97937289 -47651999 - MIR SINE MIR -155 107 14 2112 122 10 0 chr10 97937751 97938138 -47651150 + AluSx SINE Alu 1 390 0 397 305 69 65 chr10 97938242 97938504 -47650784 - L2 LINE L2 -43 3270 3008 * 557 348 95 42 chr10 97938499 97939368 -47649920 + L2 LINE L2 2353 3262 -10 354 305 8 23 chr10 97939373 97939504 -47649784 + GA-rich Low_complexity Low_complexity 3 131 0 660 242 115 0 chr10 97939578 97939760 -47649528 + MER3 DNA MER1_type 1 203 -6 1506 179 9 80 chr10 97940532 97940857 -47648431 - AluJo SINE Alu -10 302 1 249 57 0 0 chr10 97942057 97942092 -47647196 + (TCCA)n Simple_repeat Simple_repeat 3 37 0 21 36 0 0 chr10 97942582 97942610 -47646678 + AT_rich Low_complexity Low_complexity 1 28 0 236 281 134 37 chr10 97943100 97943264 -47646024 - L2 LINE L2 -5 3308 3129 1049 325 105 16 chr10 97943421 97944060 -47645228 - L2 LINE L2 -682 2632 1937 442 204 20 10 chr10 97945199 97945297 -47643991 + MLT1H LTR MaLR 73 171 -378 * 3633 140 24 30 chr10 97945295 97945925 -47643363 + MER73 LTR ERVL 17 642 -2 779 294 69 50 chr10 97945932 97946309 -47642979 + MLT1H LTR MaLR 166 549 0 405 0 0 0 chr10 97946524 97946569 -47642719 + (CA)n Simple_repeat Simple_repeat 2 46 0 180 111 0 0 chr10 97947308 97947335 -47641953 + (A)n Simple_repeat Simple_repeat 1 27 0 244 197 0 30 chr10 97947808 97947874 -47641414 + A-rich Low_complexity Low_complexity 2 65 0 221 318 0 0 chr10 97948103 97948169 -47641119 - MIR SINE MIR -105 157 92 2104 86 55 7 chr10 97950000 97950290 -47638998 + AluSg SINE Alu 1 304 -6 1880 175 33 0 chr10 97950359 97950696 -47638592 - MER7A DNA MER2_type 0 346 1 22 35 0 0 chr10 97951455 97951484 -47637804 + AT_rich Low_complexity Low_complexity 1 29 0 2569 95 63 21 chr10 97951623 97952053 -47637235 + LTR7 LTR ERV1 1 448 -2 19269 107 16 14 chr10 97952055 97955038 -47634250 + HERVH LTR ERV1 1 2987 -4726 892 142 20 0 chr10 97955032 97955180 -47634108 + HERVH LTR ERV1 3140 3290 -4423 * 3343 113 4 6 chr10 97955170 97955673 -47633615 + HERVH LTR ERV1 3492 3993 -3720 4274 149 1 1 chr10 97955675 97956337 -47632951 + HERVH LTR ERV1 4488 5149 -2564 1384 110 23 14 chr10 97956334 97956553 -47632735 + HERVH LTR ERV1 5597 5817 -1896 * 2437 82 50 16 chr10 97956555 97956932 -47632356 + HERVH LTR ERV1 7324 7713 0 2558 91 58 28 chr10 97956932 97957360 -47631928 + LTR7 LTR ERV1 1 441 -9 25 65 0 0 chr10 97957436 97957482 -47631806 + AT_rich Low_complexity Low_complexity 1 46 0 1293 241 78 39 chr10 97957830 97958293 -47630995 - MER114 LTR ERV 0 648 156 7072 95 17 2 chr10 97958293 97959248 -47630040 - LTR5 LTR ERVK 0 969 1 1293 241 78 39 chr10 97959248 97959372 -47629916 - MER114 LTR ERV -492 156 38 2525 111 33 65 chr10 97959665 97960125 -47629163 + MER65A LTR ERV1 1 445 0 21 0 0 0 chr10 97960136 97960157 -47629131 + AT_rich Low_complexity Low_complexity 1 21 0 244 315 133 29 chr10 97960157 97960379 -47628909 - MIR SINE MIR -4 258 4 259 191 55 82 chr10 97960452 97960466 -47628822 - L1MA4A LINE L1 -13 6290 6277 854 266 11 19 chr10 97960466 97960729 -47628559 - L1PB4 LINE L1 -4 6152 5892 50 90 0 0 chr10 97960926 97961060 -47628228 + AT_rich Low_complexity Low_complexity 1 134 0 468 105 0 0 chr10 97961547 97961623 -47627665 + (TC)n Simple_repeat Simple_repeat 1 76 0 834 318 144 0 chr10 97962068 97962408 -47626880 + MLT1I LTR MaLR 12 400 -9 216 182 0 0 chr10 97963625 97963669 -47625619 + L2 LINE L2 3269 3312 -1 290 366 16 8 chr10 97963766 97963889 -47625399 - MIR SINE MIR -73 189 66 236 239 155 35 chr10 97964290 97964432 -47624856 + L1M4 LINE L1 5174 5332 -814 21 0 0 0 chr10 97964467 97964488 -47624800 + AT_rich Low_complexity Low_complexity 1 21 0 2067 125 0 13 chr10 97964633 97964946 -47624342 + AluSg SINE Alu 1 309 -1 463 331 28 0 chr10 97964954 97965132 -47624156 - LTR33 LTR ERVL -336 185 3 4904 147 43 4 chr10 97965523 97966405 -47622883 + L1PB4 LINE L1 5169 6094 -62 7202 42 12 0 chr10 97966405 97967489 -47621799 + L1PA4 LINE L1 5059 6152 -3 4904 147 43 4 chr10 97967489 97967554 -47621734 + L1PB4 LINE L1 6094 6155 -1 235 299 15 96 chr10 97967969 97968166 -47621122 - L2 LINE L2 -50 3263 3083 190 301 177 18 chr10 97968562 97968675 -47620613 + MIR SINE MIR 22 152 -110 1734 269 84 54 chr10 97970249 97971537 -47617751 - L1MEc LINE L1 -2488 3727 2401 503 300 107 41 chr10 97971580 97972684 -47616604 - L1MEc LINE L1 -4147 2249 1073 7475 37 9 2 chr10 97972759 97973966 -47615322 - L1PA4 LINE L1 -4 6151 4942 1296 198 32 56 chr10 97974347 97974685 -47614603 - MER44D DNA MER2_type 0 609 10 949 293 80 22 chr10 97975244 97975882 -47613406 - L1ME3A LINE L1 -224 5946 5260 33 43 0 0 chr10 97976079 97976126 -47613162 + AT_rich Low_complexity Low_complexity 1 47 0 1845 192 0 0 chr10 97976149 97976461 -47612827 + AluJo SINE Alu 1 312 0 22 35 0 0 chr10 97976898 97976927 -47612361 + AT_rich Low_complexity Low_complexity 1 29 0 437 253 89 27 chr10 97977268 97977414 -47611874 - L2 LINE L2 -3 3310 3156 28836 70 7 6 chr10 97977729 97982404 -47606884 + L1PA6 LINE L1 1462 6143 -11 3059 199 58 110 chr10 97982407 97983490 -47605798 - Charlie1a DNA MER1_type -241 1214 188 328 189 252 49 chr10 97983502 97983645 -47605643 + MER58B DNA MER1_type 169 340 -1 794 270 15 0 chr10 97983982 97984178 -47605110 - Charlie1a DNA MER1_type -1256 199 1 1630 197 7 0 chr10 97984456 97984745 -47604543 + AluJo SINE Alu 1 291 -21 21 71 0 0 chr10 97984745 97984787 -47604501 + AT_rich Low_complexity Low_complexity 1 42 0 22 0 0 0 chr10 97984924 97984946 -47604342 + AT_rich Low_complexity Low_complexity 1 22 0 275 254 30 0 chr10 97985632 97985699 -47603589 - MLT1I LTR MaLR 0 409 341 379 263 84 0 chr10 97985847 97985980 -47603308 - MLT1J1 LTR MaLR -227 182 40 26 0 0 0 chr10 97986564 97986590 -47602698 + AT_rich Low_complexity Low_complexity 1 26 0 325 221 58 29 chr10 97986893 97986997 -47602291 - MLT1L LTR MaLR -14 601 495 501 303 66 0 chr10 97987219 97987430 -47601858 + L1ME3A LINE L1 5721 5945 -225 1535 225 39 14 chr10 97987453 97987809 -47601479 - MLT1A1 LTR MaLR 0 365 1 2101 141 93 13 chr10 97987829 97988225 -47601063 + MSTA LTR MaLR 1 428 0 29 0 0 0 chr10 97988440 97988469 -47600819 + AT_rich Low_complexity Low_complexity 1 29 0 354 295 67 0 chr10 97989824 97989929 -47599359 + MER5A DNA MER1_type 56 167 -22 513 272 107 0 chr10 97990380 97990549 -47598739 - MIR SINE MIR 0 262 76 2315 141 26 8 chr10 97991656 97992039 -47597249 - MLT1B LTR MaLR 0 390 1 180 229 0 42 chr10 97992448 97992496 -47596792 - MIR SINE MIR -120 142 97 3718 115 70 2 chr10 97992496 97993052 -47596236 + LTR9 LTR ERV1 1 594 -18 248 167 0 0 chr10 97993083 97993119 -47596169 - LTR9 LTR ERV1 -315 297 262 198 0 0 0 chr10 97994641 97994663 -47594625 + (CAA)n Simple_repeat Simple_repeat 3 24 0 709 297 172 24 chr10 97995192 97995739 -47593549 - L2 LINE L2 -4 3309 2680 23 33 0 0 chr10 97996406 97996436 -47592852 + AT_rich Low_complexity Low_complexity 1 30 0 1696 167 27 24 chr10 97996506 97996835 -47592453 + MER2 DNA MER2_type 4 333 -12 181 295 95 86 chr10 97997707 97997812 -47591476 - MIR SINE MIR -65 143 38 670 271 16 26 chr10 97998019 97998211 -47591077 - MIR SINE MIR -32 230 41 228 275 154 0 chr10 97998185 97998276 -47591012 + L2 LINE L2 3205 3309 -4 * 224 216 0 0 chr10 97998676 97998713 -47590575 + MIR SINE MIR 78 114 -148 705 231 89 59 chr10 97998715 97999039 -47590249 + MER46C DNA MER2_type 5 338 0 223 304 0 0 chr10 97999798 97999854 -47589434 + CT-rich Low_complexity Low_complexity 4 59 0 533 108 0 0 chr10 98000397 98000480 -47588808 + L1MA7 LINE L1 6203 6285 -6 21 0 0 0 chr10 98000480 98000501 -47588787 + AT_rich Low_complexity Low_complexity 1 21 0 1742 194 16 47 chr10 98000843 98001229 -47588059 + MLT1A2 LTR MaLR 1 374 0 423 354 74 50 chr10 98002036 98002375 -47586913 + L2 LINE L2 2926 3272 0 556 300 43 51 chr10 98003413 98003666 -47585622 - MIR SINE MIR -10 252 2 233 225 50 12 chr10 98003666 98003746 -47585542 + L1M3 LINE L1 5348 5430 -750 305 331 79 8 chr10 98004010 98004137 -47585151 + L1ME LINE L1 5610 5745 -376 55 56 0 0 chr10 98004373 98004463 -47584825 + AT_rich Low_complexity Low_complexity 1 90 0 440 302 47 29 chr10 98005001 98005173 -47584115 + MIR SINE MIR 40 214 -48 1093 225 201 15 chr10 98006717 98007051 -47582237 - MSTD LTR MaLR 0 396 1 347 0 23 0 chr10 98007743 98007786 -47581502 + (TAGA)n Simple_repeat Simple_repeat 4 47 0 22 0 0 0 chr10 98007846 98007868 -47581420 + AT_rich Low_complexity Low_complexity 1 22 0 229 261 11 22 chr10 98008043 98008135 -47581153 + L1ME LINE L1 5592 5682 -439 200 285 111 49 chr10 98008945 98009089 -47580199 - L2 LINE L2 -6 3307 3155 252 303 114 30 chr10 98009205 98009337 -47579951 + MIR SINE MIR 32 174 -88 1678 127 79 14 chr10 98009593 98009885 -47579403 + MER4B LTR ERV1 1 311 -299 334 281 0 94 chr10 98011368 98011494 -47577794 + MLT1L LTR MaLR 42 155 -460 941 191 21 17 chr10 98011494 98011729 -47577559 - Charlie1 DNA MER1_type 0 2761 2526 7773 164 31 24 chr10 98011758 98013250 -47576038 + L1P LINE L1 11 1512 -4634 1951 176 85 15 chr10 98014564 98014962 -47574326 - MSTB LTR MaLR 0 426 1 216 278 226 17 chr10 98015201 98015316 -47573972 + MIR SINE MIR 61 199 -63 25 0 0 0 chr10 98015399 98015424 -47573864 + AT_rich Low_complexity Low_complexity 1 25 0 1982 140 78 13 chr10 98015549 98015934 -47573354 - Tigger3b DNA MER2_type -654 577 168 233 30 30 0 chr10 98015934 98015967 -47573321 - MER4E LTR ERV1 0 766 733 989 212 23 9 chr10 98016067 98016284 -47573004 + MER58A DNA MER1_type 5 224 0 561 295 81 19 chr10 98016821 98017031 -47572257 + MIR SINE MIR 11 233 -29 231 114 0 0 chr10 98017671 98017706 -47571582 + (GA)n Simple_repeat Simple_repeat 2 36 0 2550 36 7 3 chr10 98018073 98018378 -47570910 - AluY SINE Alu -5 306 1 1235 244 143 73 chr10 98020109 98020613 -47568675 + MLT1F1 LTR MaLR 4 567 0 348 274 44 30 chr10 98020614 98020749 -47568539 + MER117 DNA MER1_type 45 181 -16 249 33 0 0 chr10 98022196 98022226 -47567062 + (CA)n Simple_repeat Simple_repeat 1 30 0 600 229 0 0 chr10 98023284 98023393 -47565895 + FLAM_A SINE Alu 1 109 -33 195 42 0 0 chr10 98023397 98023421 -47565867 + (CAAT)n Simple_repeat Simple_repeat 4 27 0 215 341 24 8 chr10 98023627 98023753 -47565535 + L2 LINE L2 2454 2581 -733 3015 144 19 150 chr10 98023775 98024550 -47564738 - L1 LINE L1 -1254 4892 4255 2177 129 7 0 chr10 98024550 98024860 -47564428 + AluSx SINE Alu 1 312 0 3015 144 19 150 chr10 98024860 98025005 -47564283 - L1 LINE L1 -1891 4255 4093 2212 197 50 13 chr10 98025004 98025538 -47563750 + L1 LINE L1 2698 3258 -2888 * 2841 81 93 0 chr10 98025538 98025948 -47563340 - LTR7 LTR ERV1 -2 448 1 2212 197 50 13 chr10 98025948 98026012 -47563276 + L1 LINE L1 3258 3318 -2828 1068 330 37 36 chr10 98026484 98027182 -47562106 + L2 LINE L2 2606 3313 0 192 349 151 0 chr10 98027329 98027435 -47561853 + L2 LINE L2 3187 3308 -5 386 356 21 37 chr10 98027659 98027850 -47561438 + MER5A DNA MER1_type 2 189 0 369 0 0 0 chr10 98028833 98028874 -47560414 + (CA)n Simple_repeat Simple_repeat 1 41 0 885 175 110 51 chr10 98029144 98029499 -47559789 - L1MDa LINE L1 -3996 2544 2169 950 191 16 45 chr10 98029503 98029667 -47559621 + L1M2 LINE L1 2431 2587 -4262 4470 79 112 0 chr10 98029667 98030286 -47559002 - LTR12 LTR ERV1 0 688 1 950 191 16 45 chr10 98030286 98030367 -47558921 + L1M2 LINE L1 2587 2669 -4180 3387 235 54 24 chr10 98030372 98031753 -47557535 + L1M1 LINE L1 3152 4577 -2988 379 132 44 15 chr10 98031831 98031899 -47557389 + MER61A-int LTR ERV1 631 700 -4517 17138 108 21 18 chr10 98031939 98035077 -47554211 + MER61A-int LTR ERV1 1320 4632 -585 1841 74 60 32 chr10 98035072 98035355 -47553933 + MER61A-int LTR ERV1 4927 5217 0 * 1476 148 158 26 chr10 98035355 98035658 -47553630 + MER61A LTR ERV1 1 343 0 520 258 16 0 chr10 98035708 98035836 -47553452 + L1MD2 LINE L1 6194 6323 -36 2193 70 3 0 chr10 98035842 98036129 -47553159 - L1PA5 LINE L1 0 6154 5867 182 259 0 17 chr10 98036350 98036408 -47552880 + MIR SINE MIR 160 216 -46 735 199 20 7 chr10 98036426 98036577 -47552711 - MER58A DNA MER1_type -9 215 63 901 218 6 0 chr10 98036578 98036748 -47552540 + Tigger3b DNA MER2_type 1 171 -1060 3300 89 51 118 chr10 98036748 98037455 -47551833 + MER4A LTR ERV1 1 779 0 5591 131 54 32 chr10 98037455 98037853 -47551435 + Tigger3b DNA MER2_type 168 556 -2472 2005 142 0 0 chr10 98037853 98038141 -47551147 - AluSx SINE Alu -24 288 1 5591 131 54 32 chr10 98038141 98038783 -47550505 + Tigger3b DNA MER2_type 556 1231 0 232 339 18 0 chr10 98038787 98038843 -47550445 - MER58A DNA MER1_type -167 57 1 267 320 131 7 chr10 98038887 98039040 -47550248 + MIR3 SINE MIR 36 207 -1 26 0 0 0 chr10 98039581 98039607 -47549681 + AT_rich Low_complexity Low_complexity 1 26 0 325 346 45 23 chr10 98040000 98040133 -47549155 - MIR3 SINE MIR -67 141 6 233 352 181 11 chr10 98040423 98040693 -47548595 - L2 LINE L2 0 3272 2957 206 331 23 39 chr10 98040849 98040979 -47548309 + L2 LINE L2 2213 2340 -974 225 0 0 0 chr10 98041264 98041289 -47547999 + (TG)n Simple_repeat Simple_repeat 2 26 0 381 22 0 0 chr10 98041424 98041470 -47547818 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 14962 53 2 1 chr10 98041470 98044121 -47545167 - L1PA5 LINE L1 -16 6138 3480 546 348 112 41 chr10 98044907 98045012 -47544276 + L2 LINE L2 2185 2281 -1033 2231 82 0 7 chr10 98045012 98045316 -47543972 - AluY SINE Alu 0 302 1 546 348 112 41 chr10 98045316 98045943 -47543345 + L2 LINE L2 2281 2971 -343 40 0 0 0 chr10 98046054 98046094 -47543194 + AT_rich Low_complexity Low_complexity 1 40 0 278 252 157 35 chr10 98047294 98047409 -47541879 - MIR3 SINE MIR -46 162 34 782 228 139 0 chr10 98047431 98047633 -47541655 + MIR SINE MIR 22 251 -11 2001 149 112 31 chr10 98047724 98048179 -47541109 - MLT1D LTR MaLR -13 492 1 261 0 0 0 chr10 98048309 98048338 -47540950 + (TG)n Simple_repeat Simple_repeat 2 30 0 7728 140 8 7 chr10 98049038 98049509 -47539779 - HSMAR2 DNA Mariner 0 1302 833 2499 117 8 13 chr10 98049509 98049886 -47539402 + THE1C LTR MaLR 1 375 0 7728 140 8 7 chr10 98049886 98050712 -47538576 - HSMAR2 DNA Mariner -469 833 3 2159 210 38 13 chr10 98051348 98051825 -47537463 - MLT1D LTR MaLR -8 497 9 259 286 9 57 chr10 98051887 98051992 -47537296 - MER102a DNA MER1_type -9 321 222 278 197 15 15 chr10 98053050 98053116 -47536172 + CT-rich Low_complexity Low_complexity 1 66 0 273 29 0 0 chr10 98053124 98053158 -47536130 + (TG)n Simple_repeat Simple_repeat 1 34 0 186 219 0 0 chr10 98053158 98053222 -47536066 + GA-rich Low_complexity Low_complexity 1 64 0 234 207 0 0 chr10 98053707 98053765 -47535523 + CT-rich Low_complexity Low_complexity 1 58 0 207 190 52 0 chr10 98054362 98054420 -47534868 + (TAGA)n Simple_repeat Simple_repeat 1 61 0 239 65 0 0 chr10 98055577 98055623 -47533665 - LTR66 LTR ERVL -171 439 394 240 219 0 0 chr10 98055637 98055701 -47533587 + L1MC4 LINE L1 6640 6703 -1339 572 156 9 9 chr10 98055717 98055826 -47533462 + MER21A LTR ERV1 13 121 -810 240 219 0 0 chr10 98055943 98056007 -47533281 + L1MC4 LINE L1 6640 6703 -1339 2538 169 31 38 chr10 98056029 98056460 -47532828 + MER21B LTR ERV1 13 458 -405 1702 148 64 3 chr10 98056460 98056743 -47532545 - AluSg SINE Alu -10 300 1 2538 169 31 38 chr10 98056743 98057106 -47532182 + MER21B LTR ERV1 458 822 -41 25 0 0 0 chr10 98057983 98058008 -47531280 + AT_rich Low_complexity Low_complexity 1 25 0 212 327 36 107 chr10 98058019 98058355 -47530933 - L2 LINE L2 -51 3221 2910 543 269 41 0 chr10 98058768 98058939 -47530349 + MIR SINE MIR 12 189 -73 323 178 47 9 chr10 98058987 98059094 -47530194 + (TA)n Simple_repeat Simple_repeat 2 112 0 28 48 0 0 chr10 98059759 98059801 -47529487 + AT_rich Low_complexity Low_complexity 1 42 0 10151 209 29 15 chr10 98060006 98062135 -47527153 + L1M2 LINE L1 2 2159 -4690 5684 189 51 6 chr10 98062728 98064743 -47524545 - L1PA15 LINE L1 -5 6160 4078 1335 166 166 19 chr10 98064748 98065062 -47524226 - LTR47A LTR ERVL -92 360 1 915 174 6 18 chr10 98065062 98065229 -47524059 + MLT1C LTR MaLR 303 467 0 196 244 0 0 chr10 98065274 98065315 -47523973 - MIR3 SINE MIR -4 204 164 24 32 0 0 chr10 98066003 98066034 -47523254 + AT_rich Low_complexity Low_complexity 1 31 0 23 0 0 0 chr10 98066059 98066082 -47523206 + AT_rich Low_complexity Low_complexity 1 23 0 436 382 25 0 chr10 98066095 98066252 -47523036 - MIR SINE MIR -95 167 7 708 261 70 43 chr10 98066813 98067112 -47522176 - LTR33 LTR ERVL -211 310 4 859 323 149 23 chr10 98067475 98068166 -47521122 + L3 LINE CR1 793 1570 -7 22 0 0 0 chr10 98068239 98068261 -47521027 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr10 98068878 98068907 -47520381 + AT_rich Low_complexity Low_complexity 1 29 0 704 204 31 10 chr10 98070209 98070405 -47518883 + L1MA4A LINE L1 1960 2159 -4690 * 2039 185 33 38 chr10 98070391 98071262 -47518026 + L1MA4A LINE L1 2518 3383 -3465 4966 178 29 5 chr10 98071263 98072350 -47516938 + L1MA4A LINE L1 3777 4889 -1959 1941 183 58 22 chr10 98072363 98072774 -47516514 + MSTB LTR MaLR 1 426 0 2454 169 17 4 chr10 98072836 98073302 -47515986 + L1MA4A LINE L1 6478 6949 -56 988 109 26 6 chr10 98073357 98073513 -47515775 - L1PA13 LINE L1 -13 6150 5992 35 24 0 0 chr10 98073592 98073634 -47515654 + AT_rich Low_complexity Low_complexity 1 42 0 251 75 30 90 chr10 98073640 98073707 -47515581 - L1MA4A LINE L1 -6 6297 6235 5793 111 23 3 chr10 98073777 98074878 -47514410 - L1PA13 LINE L1 0 6163 5047 332 302 22 35 chr10 98074899 98075131 -47514157 + L1MEc LINE L1 1439 1667 -4729 400 290 17 3 chr10 98075305 98075523 -47513765 - L1MEc LINE L1 -1019 1471 1195 2754 237 36 18 chr10 98075557 98076405 -47512883 + L1ME1 LINE L1 5241 6102 -64 392 314 38 4 chr10 98077335 98077596 -47511692 - L1MEc LINE L1 -4954 1165 896 21 36 0 0 chr10 98078093 98078121 -47511167 + AT_rich Low_complexity Low_complexity 1 28 0 213 65 0 0 chr10 98078265 98078296 -47510992 + (CA)n Simple_repeat Simple_repeat 2 32 0 223 222 0 28 chr10 98079952 98080024 -47509264 + (TA)n Simple_repeat Simple_repeat 1 70 0 29 84 0 0 chr10 98080335 98080406 -47508882 + AT_rich Low_complexity Low_complexity 1 71 0 217 197 26 0 chr10 98080584 98080660 -47508628 + (TA)n Simple_repeat Simple_repeat 2 79 0 2238 120 0 0 chr10 98080727 98081028 -47508260 - AluSx SINE Alu -11 301 1 725 318 58 18 chr10 98081238 98081684 -47507604 - LTR16B LTR ERVL 0 464 1 285 256 23 0 chr10 98081975 98082061 -47507227 + MLT1C LTR MaLR 3 90 -377 1658 192 165 41 chr10 98082235 98083013 -47506275 + L1 LINE L1 3458 4366 -1780 1703 149 7 21 chr10 98083650 98083931 -47505357 + AluJb SINE Alu 1 277 -35 583 151 0 11 chr10 98084647 98084740 -47504548 - AluSc SINE Alu -217 92 1 1098 135 19 14 chr10 98085801 98086008 -47503280 + THE1C LTR MaLR 168 375 0 672 114 19 57 chr10 98086013 98086171 -47503117 + THE1C-int LTR MaLR 5 156 -1424 211 240 144 39 chr10 98088064 98088168 -47501120 + MIR SINE MIR 33 147 -61 21 0 0 0 chr10 98089645 98089666 -47499622 + AT_rich Low_complexity Low_complexity 1 21 0 447 294 48 0 chr10 98089938 98090064 -47499224 + L3 LINE CR1 1433 1564 -13 318 308 88 22 chr10 98091759 98091986 -47497302 + L2 LINE L2 1359 1600 -1714 1662 144 48 4 chr10 98092060 98092330 -47496958 - AluSx SINE Alu -30 282 1 210 265 154 34 chr10 98092378 98092495 -47496793 + L2 LINE L2 1686 1816 -1498 330 327 30 0 chr10 98092521 98092622 -47496666 + L2 LINE L2 2602 2705 -609 578 208 56 7 chr10 98092624 98092768 -47496520 - L1ME2 LINE L1 -1 6163 6013 1734 160 6 63 chr10 98092809 98093140 -47496148 + AluJo SINE Alu 1 312 0 1588 214 49 33 chr10 98093449 98093962 -47495326 - L1ME2 LINE L1 -51 6113 5593 24 0 0 0 chr10 98094174 98094198 -47495090 + AT_rich Low_complexity Low_complexity 1 24 0 791 145 14 51 chr10 98094199 98094337 -47494951 - FLAM_C SINE Alu 0 133 1 2382 115 25 6 chr10 98094358 98094715 -47494573 - THE1B LTR MaLR 0 364 1 640 278 55 62 chr10 98094720 98094783 -47494505 - L1MDa LINE L1 -4562 1653 1591 2423 82 3 0 chr10 98094783 98095089 -47494199 - AluY SINE Alu -4 307 1 640 278 55 62 chr10 98095089 98095926 -47493362 - L1MDa LINE L1 -4624 1591 802 361 347 72 22 chr10 98096709 98096931 -47492357 + L2 LINE L2 2701 2933 -381 460 266 13 7 chr10 98097047 98097201 -47492087 + L1ME LINE L1 5454 5608 -554 459 281 82 6 chr10 98097545 98097716 -47491572 - MIR SINE MIR -15 247 64 * 1789 302 95 16 chr10 98097714 98098271 -47491017 - L2 LINE L2 -99 3214 2702 1824 183 14 30 chr10 98098271 98098642 -47490646 + MLT1A1 LTR MaLR 1 365 0 1789 302 95 16 chr10 98098642 98099070 -47490218 - L2 LINE L2 -611 2702 2138 468 283 78 11 chr10 98099326 98099506 -47489782 - L2 LINE L2 -1203 2111 1920 181 325 65 13 chr10 98100241 98100318 -47488970 - MIR3 SINE MIR -12 196 116 506 309 149 0 chr10 98100363 98100557 -47488731 + MIR SINE MIR 29 251 -11 2475 59 0 0 chr10 98100594 98100884 -47488404 + AluY SINE Alu 2 291 -20 2360 82 7 0 chr10 98101423 98101715 -47487573 - AluSc SINE Alu -15 294 1 516 139 109 1 chr10 98102185 98102296 -47486992 - L1MC3 LINE L1 -11 7764 6204 1334 161 84 110 chr10 98102301 98102692 -47486596 + MER31B LTR ERV1 7 387 -79 4295 173 39 43 chr10 98102731 98103685 -47485603 - L1MC3 LINE L1 -121 7664 6715 2183 210 19 28 chr10 98103683 98104225 -47485063 + L1MB1 LINE L1 4797 5333 -813 * 3775 163 88 5 chr10 98104226 98104694 -47484594 + L1MB1 LINE L1 5299 5854 -314 1095 44 13 6 chr10 98104694 98104853 -47484435 + (TAGA)n Simple_repeat Simple_repeat 1 160 0 3775 163 88 5 chr10 98104853 98105137 -47484151 + L1MB1 LINE L1 5854 6113 -55 * 5632 206 54 28 chr10 98105129 98105398 -47483890 - L1MC3 LINE L1 -754 5392 5132 1762 206 80 29 chr10 98105398 98105875 -47483413 - MLT1D LTR MaLR 0 505 5 5632 206 54 28 chr10 98105875 98105917 -47483371 - L1MC3 LINE L1 -1014 5132 5093 1679 198 32 121 chr10 98105917 98106513 -47482775 - MER67A LTR ERV1 0 543 1 5632 206 54 28 chr10 98106513 98107075 -47482213 - L1MC3 LINE L1 -1053 5093 5742 2295 143 22 0 chr10 98107075 98107431 -47481857 + THE1B LTR MaLR 1 364 0 5632 206 54 28 chr10 98107431 98108907 -47480381 - L1MC3 LINE L1 -403 5743 4307 5230 105 8 6 chr10 98108899 98108988 -47480300 + L1PA13 LINE L1 5380 5467 -696 * 1457 133 0 22 chr10 98108988 98109214 -47480074 - AluSg/x SINE Alu -14 296 76 5230 105 8 6 chr10 98109214 98109903 -47479385 + L1PA13 LINE L1 5467 6159 -4 1183 242 26 0 chr10 98109908 98110214 -47479074 - L1MC3 LINE L1 -1827 4319 4006 185 296 139 17 chr10 98110518 98110633 -47478655 - L2 LINE L2 -1 3271 3143 692 311 97 25 chr10 98111004 98111612 -47477676 - L1ME3A LINE L1 -208 5962 5301 313 307 69 35 chr10 98111616 98111818 -47477470 - L1ME3A LINE L1 -878 5268 5060 23 68 0 0 chr10 98111819 98111863 -47477425 + AT_rich Low_complexity Low_complexity 1 44 0 443 295 179 22 chr10 98112375 98112643 -47476645 - MLT2E LTR ERVL 0 628 319 339 224 12 12 chr10 98112631 98112716 -47476572 - MLT2E LTR ERVL -435 193 109 * 397 302 38 45 chr10 98113059 98113259 -47476029 + L1M4 LINE L1 4475 4674 -1472 2028 141 0 3 chr10 98113259 98113558 -47475730 + AluSx SINE Alu 1 298 -14 397 302 38 45 chr10 98113558 98113645 -47475643 + L1M4 LINE L1 4674 4760 -1386 26 50 0 0 chr10 98114111 98114151 -47475137 + AT_rich Low_complexity Low_complexity 1 40 0 332 291 44 54 chr10 98114179 98114444 -47474844 + L1M4 LINE L1 5349 5606 -615 227 309 21 21 chr10 98114688 98114782 -47474506 + L1M4 LINE L1 5786 5879 -295 264 56 0 0 chr10 98115020 98115039 -47474249 + (A)n Simple_repeat Simple_repeat 1 22 -14 1972 127 35 0 chr10 98115039 98115323 -47473965 - AluSx SINE Alu -18 294 1 264 56 0 0 chr10 98115323 98115339 -47473949 + (A)n Simple_repeat Simple_repeat 21 36 0 216 363 20 27 chr10 98116073 98116219 -47473069 + L3 LINE CR1 1031 1175 -402 960 291 185 23 chr10 98117596 98118159 -47471129 + MER20B DNA MER1_type 1 654 -129 274 236 0 0 chr10 98118164 98118236 -47471052 - L1M4 LINE L1 -884 5262 5191 5873 139 26 21 chr10 98118313 98118988 -47470300 - L1PB1 LINE L1 -3 6864 6194 246 32 0 0 chr10 98118988 98119019 -47470269 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 5873 139 26 21 chr10 98119019 98119706 -47469582 - L1PB1 LINE L1 -673 6194 5503 5217 152 39 14 chr10 98119706 98120645 -47468643 - L1PB1 LINE L1 -5898 965 3 1534 251 82 21 chr10 98120651 98121225 -47468063 - L1M4 LINE L1 -944 5202 4594 444 332 47 5 chr10 98121253 98121443 -47467845 + MIR SINE MIR 16 213 -49 * 1839 285 51 54 chr10 98121422 98122474 -47466814 + L2 LINE L2 2277 3313 0 184 358 0 0 chr10 98122478 98122559 -47466729 + MIR SINE MIR 181 261 -1 368 352 6 45 chr10 98123389 98123568 -47465720 - MIR3 SINE MIR -17 191 20 513 289 70 11 chr10 98124637 98124824 -47464464 + MIR SINE MIR 20 217 -45 608 134 98 0 chr10 98125366 98125478 -47463810 - L1MC3 LINE L1 0 7785 7663 599 256 97 10 chr10 98125480 98125557 -47463731 - LTR52 LTR ERVL 0 421 352 384 22 0 0 chr10 98125557 98125602 -47463686 + (CA)n Simple_repeat Simple_repeat 1 45 0 599 256 97 10 chr10 98125602 98125719 -47463569 - LTR52 LTR ERVL -69 352 210 3178 160 28 0 chr10 98125719 98126299 -47462989 - L1MA5 LINE L1 -5 6295 5700 5386 259 33 20 chr10 98126303 98128394 -47460894 + L1PA12 LINE L1 2353 4459 -3125 6931 269 55 21 chr10 98128400 98131826 -47457462 - L1 LINE L1 -3456 3276 3 236 360 57 24 chr10 98131845 98132142 -47457146 - L1M3d LINE L1 -5584 307 1 969 247 5 27 chr10 98132149 98132372 -47456916 - LTR52 LTR ERVL -203 218 1 419 184 10 0 chr10 98132381 98132479 -47456809 - L1MC3 LINE L1 -132 7653 7555 22 0 0 0 chr10 98132489 98132511 -47456777 + AT_rich Low_complexity Low_complexity 1 22 0 234 271 12 0 chr10 98132890 98132975 -47456313 + MER113 DNA MER1_type? 31 116 -405 267 267 0 0 chr10 98133041 98133101 -47456187 + MER113 DNA MER1_type? 462 521 0 7024 58 0 0 chr10 98133174 98134478 -47454810 - L1PA7 LINE L1 -5 6149 4844 2789 216 43 19 chr10 98134677 98135349 -47453939 - MER76 LTR ERV 0 688 1 22 56 0 0 chr10 98136102 98136138 -47453150 + AT_rich Low_complexity Low_complexity 1 36 0 1840 124 36 0 chr10 98136686 98136961 -47452327 + AluSx SINE Alu 1 285 -27 336 335 91 42 chr10 98137305 98137592 -47451696 + L2 LINE L2 2972 3272 0 385 330 57 63 chr10 98137971 98138271 -47451017 + MLT1K LTR MaLR 189 486 -102 273 262 0 0 chr10 98138447 98138508 -47450780 + L2 LINE L2 3253 3313 0 1241 296 98 11 chr10 98139936 98140314 -47448974 + L1ME2 LINE L1 1 345 -5735 284 47 0 23 chr10 98140314 98140357 -47448931 + (CA)n Simple_repeat Simple_repeat 2 43 0 1241 296 98 11 chr10 98140357 98141121 -47448167 + L1ME2 LINE L1 345 1322 -4758 2050 156 32 6 chr10 98141125 98141472 -47447816 + MER47A DNA MER2_type 1 356 -10 789 262 154 63 chr10 98141486 98142043 -47447245 + L1ME2 LINE L1 1332 1980 -4153 1421 203 25 83 chr10 98142049 98142374 -47446914 + MLT1B LTR MaLR 7 305 -85 1202 75 139 0 chr10 98142374 98142401 -47446887 - MER107 DNA MER1_type 0 197 175 293 0 0 26 chr10 98142401 98142439 -47446849 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 1202 75 139 0 chr10 98142439 98142584 -47446704 - MER107 DNA MER1_type -22 175 1 1421 203 25 83 chr10 98142584 98142666 -47446622 + MLT1B LTR MaLR 305 390 0 1368 251 45 78 chr10 98142668 98143488 -47445800 + L1ME2 LINE L1 1978 2717 -3363 257 185 138 0 chr10 98143489 98143554 -47445734 + Tigger5 DNA MER2_type 2219 2292 -31 6442 190 5 2 chr10 98143556 98144700 -47444588 - MSTB-int LTR MaLR -503 1148 1 2116 211 20 6 chr10 98144700 98145119 -47444169 - MSTB LTR MaLR 0 428 1 4089 242 45 21 chr10 98145350 98146378 -47442910 + L1ME2 LINE L1 3851 4853 -1245 2429 198 9 0 chr10 98146378 98146802 -47442486 - MSTB1 LTR MaLR -4 428 1 4089 242 45 21 chr10 98146802 98147860 -47441428 + L1ME2 LINE L1 4853 5996 -102 1824 167 16 43 chr10 98147860 98148232 -47441056 + MLT1A1 LTR MaLR 4 365 0 4089 242 45 21 chr10 98148232 98148319 -47440969 + L1ME2 LINE L1 5996 6079 -19 27 0 0 0 chr10 98148752 98148779 -47440509 + AT_rich Low_complexity Low_complexity 1 27 0 18340 174 24 10 chr10 98150170 98154876 -47434412 - L1PA13 LINE L1 0 6954 2195 483 157 41 83 chr10 98154872 98154993 -47434295 - L1M1 LINE L1 -7437 128 13 * 4372 129 16 3 chr10 98154980 98155336 -47433952 - L1MA3 LINE L1 -150 7574 7224 333 0 0 0 chr10 98155336 98155373 -47433915 + (TG)n Simple_repeat Simple_repeat 2 38 0 4372 129 16 3 chr10 98155373 98155712 -47433576 - L1MA3 LINE L1 -500 7224 6870 * 22139 165 33 18 chr10 98155709 98156796 -47432492 - L1MA3 LINE L1 -1266 6299 5231 1418 224 3 26 chr10 98156796 98157100 -47432188 - AluJo SINE Alu -15 297 1 22139 165 33 18 chr10 98157100 98157193 -47432095 - L1MA3 LINE L1 -2334 5231 5141 2307 80 3 13 chr10 98157193 98157507 -47431781 - AluY SINE Alu 0 311 1 22139 165 33 18 chr10 98157507 98160779 -47428509 - L1MA3 LINE L1 -2424 5141 1699 366 23 0 0 chr10 98160779 98160822 -47428466 + (TC)n Simple_repeat Simple_repeat 2 44 0 22139 165 33 18 chr10 98160822 98162549 -47426739 - L1MA3 LINE L1 -5866 1699 1 21 0 0 0 chr10 98162679 98162700 -47426588 + AT_rich Low_complexity Low_complexity 1 21 0 732 265 48 26 chr10 98162800 98163030 -47426258 + MER102b DNA MER1_type 103 337 -4 2120 178 98 13 chr10 98163920 98164380 -47424908 - MLT1D LTR MaLR -2 503 5 215 31 31 0 chr10 98164821 98164853 -47424435 + (TG)n Simple_repeat Simple_repeat 2 34 0 737 308 40 5 chr10 98164862 98165086 -47424202 - MIR SINE MIR -2 260 29 285 75 0 0 chr10 98165399 98165439 -47423849 + (CA)n Simple_repeat Simple_repeat 1 40 0 1746 156 34 62 chr10 98165936 98166298 -47422990 + THE1C LTR MaLR 1 353 -22 2250 86 3 3 chr10 98166298 98166590 -47422698 + AluY SINE Alu 1 292 -19 1746 156 34 62 chr10 98166590 98166611 -47422677 + THE1C LTR MaLR 353 373 -2 3315 157 20 75 chr10 98166828 98167559 -47421729 - LTR8 LTR ERV1 0 691 1 290 335 18 60 chr10 98167715 98167882 -47421406 - MIR3 SINE MIR -25 183 24 675 299 95 4 chr10 98167920 98168151 -47421137 - MIR SINE MIR -2 260 9 397 267 115 47 chr10 98168790 98168990 -47420298 - MIR SINE MIR -54 208 1 322 296 78 52 chr10 98170025 98170295 -47418993 + L1ME LINE L1 5562 5838 -283 523 260 123 10 chr10 98170546 98170750 -47418538 + L2 LINE L2 2999 3225 -88 793 114 15 0 chr10 98170784 98170916 -47418372 + (GAAA)n Simple_repeat Simple_repeat 1 134 0 205 296 148 19 chr10 98171367 98171475 -47417813 + L2 LINE L2 3188 3309 -4 433 369 67 32 chr10 98171491 98171537 -47417751 + L3 LINE CR1 69 112 -1465 2481 59 0 7 chr10 98171537 98171840 -47417448 - AluY SINE Alu -10 301 1 433 369 67 32 chr10 98171840 98172194 -47417094 + L3 LINE CR1 112 483 -1094 181 278 0 0 chr10 98172191 98172227 -47417061 + L2 LINE L2 3220 3255 -17 * 477 298 57 21 chr10 98172957 98173098 -47416190 + MIR3 SINE MIR 17 162 -46 357 320 32 16 chr10 98173658 98173783 -47415505 + L3 LINE CR1 1399 1525 -52 308 357 0 9 chr10 98173811 98173923 -47415365 - MER5B DNA MER1_type -66 112 2 21 0 0 0 chr10 98174103 98174124 -47415164 + AT_rich Low_complexity Low_complexity 1 21 0 1413 253 53 29 chr10 98175189 98175680 -47413608 + MLT1D LTR MaLR 1 503 -2 2221 167 0 0 chr10 98175971 98176330 -47412958 + MER46B DNA MER2_type 2 235 -1 2083 182 56 8 chr10 98176565 98176960 -47412328 + MER54A LTR ERVL 488 901 0 536 320 79 18 chr10 98176968 98177246 -47412042 + MLT1J LTR MaLR 3 297 -214 457 224 129 0 chr10 98177284 98177400 -47411888 + MER58B DNA MER1_type 200 330 -11 310 292 0 49 chr10 98177425 98177569 -47411719 + MLT1J LTR MaLR 334 470 -41 727 292 27 27 chr10 98177608 98177868 -47411420 - MIR SINE MIR -1 261 2 187 351 0 0 chr10 98178344 98178401 -47410887 - MIR SINE MIR -135 127 71 219 210 194 16 chr10 98179070 98179132 -47410156 - MIR3 SINE MIR -10 198 126 193 312 161 32 chr10 98179365 98179551 -47409737 - L2 LINE L2 -396 2918 2709 2396 125 5 35 chr10 98179583 98179958 -47409330 - THE1B LTR MaLR 0 364 1 1687 184 3 3 chr10 98180489 98180782 -47408506 + AluJb SINE Alu 1 293 -19 2799 106 52 29 chr10 98180812 98181255 -47408033 + MLT2A2 LTR ERVL 1 453 0 22838 85 8 1 chr10 98181255 98186821 -47402467 + HERVL-A2-A2 LTR ERVL 1 5654 0 2950 95 73 0 chr10 98186821 98187243 -47402045 + MLT2A2 LTR ERVL 1 453 0 28 29 0 0 chr10 98187984 98188019 -47401269 + AT_rich Low_complexity Low_complexity 1 35 0 300 340 147 38 chr10 98189496 98189843 -47399445 + MLT1K LTR MaLR 42 426 -162 855 225 104 9 chr10 98191591 98191822 -47397466 - MLT1D LTR MaLR 0 505 253 2278 119 0 0 chr10 98191853 98192165 -47397123 - AluSq SINE Alu -1 312 1 2941 171 2 36 chr10 98192174 98192758 -47396530 - L1MA10 LINE L1 -1 6333 5770 676 313 63 11 chr10 98192784 98193225 -47396063 + L1ME3A LINE L1 1337 1800 -4596 998 241 53 23 chr10 98193350 98193653 -47395635 + L1ME3A LINE L1 2532 2843 -3372 1304 253 55 12 chr10 98193675 98194188 -47395100 + L1ME3A LINE L1 2951 3485 -2730 963 255 11 23 chr10 98194256 98194519 -47394769 - L1M4 LINE L1 -6275 267 8 283 326 44 15 chr10 98194556 98194691 -47394597 + L1ME3A LINE L1 4139 4277 -1938 21 0 0 0 chr10 98194723 98194744 -47394544 + AT_rich Low_complexity Low_complexity 1 21 0 823 290 60 62 chr10 98195036 98195592 -47393696 + MLT1G1 LTR MaLR 1 555 0 317 252 66 33 chr10 98195703 98195854 -47393434 + L1ME3A LINE L1 5337 5492 -936 772 293 97 19 chr10 98195854 98196385 -47392903 + L1ME3A LINE L1 5443 6018 -221 1844 231 52 82 chr10 98197085 98197718 -47391570 + MER90 LTR ERV1 1 614 0 190 266 71 71 chr10 98197991 98198104 -47391184 - MIR SINE MIR -140 122 10 207 331 117 0 chr10 98198128 98198273 -47391015 - L2 LINE L2 -290 2982 2821 12851 189 31 11 chr10 98198414 98202979 -47386309 - L1MA5 LINE L1 0 6942 2285 10765 214 24 9 chr10 98202972 98205584 -47383704 - L1PA16 LINE L1 0 6869 4178 * 191 36 36 0 chr10 98205584 98205612 -47383676 + (CCCCCA)n Simple_repeat Simple_repeat 2 30 0 10765 214 24 9 chr10 98205612 98207018 -47382270 - L1PA16 LINE L1 -2691 4178 2794 483 132 0 0 chr10 98207072 98207148 -47382140 - L1PA16 LINE L1 -6757 92 17 1032 144 17 6 chr10 98207148 98207328 -47381960 + MER57A LTR ERV1 222 403 0 4887 238 69 18 chr10 98207396 98208818 -47380470 - L1MA5 LINE L1 -4490 2299 805 25 51 0 0 chr10 98210752 98210791 -47378497 + AT_rich Low_complexity Low_complexity 1 39 0 585 322 40 22 chr10 98210878 98211229 -47378059 - LTR16A LTR ERVL -50 400 43 448 275 81 35 chr10 98211938 98212044 -47377244 + HAL1b LINE L1 935 1035 -313 2213 112 0 0 chr10 98212044 98212340 -47376948 + AluSx SINE Alu 1 296 -16 448 275 81 35 chr10 98212340 98212629 -47376659 + HAL1b LINE L1 1035 1348 0 300 268 75 63 chr10 98213519 98213758 -47375530 - L1ME LINE L1 -393 5728 5487 560 316 89 42 chr10 98213868 98214342 -47374946 - L1ME LINE L1 -1857 4289 3794 27 0 0 0 chr10 98214425 98214452 -47374836 + AT_rich Low_complexity Low_complexity 1 27 0 4522 173 52 22 chr10 98214813 98215686 -47373602 - MER54A LTR ERVL 0 901 3 504 309 119 17 chr10 98215831 98216067 -47373221 + MIR SINE MIR 3 262 0 359 303 230 11 chr10 98216717 98217096 -47372192 - L1ME LINE L1 -2695 3451 2990 1304 26 0 0 chr10 98217307 98217461 -47371827 + L1PA5 LINE L1 5997 6150 -4 198 316 61 18 chr10 98217808 98217922 -47371366 + L3 LINE CR1 377 495 -1082 213 295 0 0 chr10 98218204 98218265 -47371023 - MIR SINE MIR -35 227 167 708 293 112 50 chr10 98218268 98219597 -47369691 + L1MEd LINE L1 6 1462 -4848 400 322 8 8 chr10 98219598 98219719 -47369569 - MIR SINE MIR -128 134 14 21 57 0 0 chr10 98220191 98220226 -47369062 + AT_rich Low_complexity Low_complexity 1 35 0 26 50 0 0 chr10 98220576 98220616 -47368672 + AT_rich Low_complexity Low_complexity 1 40 0 359 232 225 14 chr10 98220745 98220887 -47368401 + MIR SINE MIR 33 204 -58 305 311 66 26 chr10 98221693 98221844 -47367444 - MIR SINE MIR -14 248 92 192 364 125 0 chr10 98221883 98221971 -47367317 - L2 LINE L2 -47 3225 3127 221 305 17 85 chr10 98222905 98223023 -47366265 + L2 LINE L2 3139 3248 -24 1242 298 66 17 chr10 98223191 98223926 -47365362 + L2 LINE L2 2486 3262 -51 2012 154 7 0 chr10 98223982 98224274 -47365014 + AluSx SINE Alu 1 294 -18 659 294 20 48 chr10 98224460 98224708 -47364580 + MIR SINE MIR 11 251 -11 303 306 100 17 chr10 98225120 98225300 -47363988 - MER117 DNA MER1_type -1 196 2 444 287 59 37 chr10 98225679 98225815 -47363473 - MIR3 SINE MIR -67 141 3 363 314 139 18 chr10 98226209 98226432 -47362856 + MIR SINE MIR 13 262 0 369 314 38 45 chr10 98226451 98226652 -47362636 + MIR SINE MIR 26 222 -40 580 340 126 34 chr10 98226840 98227603 -47361685 - L2 LINE L2 -5 3267 2418 194 368 95 0 chr10 98227633 98227728 -47361560 - L2 LINE L2 -965 2349 2246 1984 161 0 0 chr10 98228645 98228943 -47360345 + AluSx SINE Alu 1 298 -14 671 269 18 12 chr10 98229094 98229265 -47360023 + MER5B DNA MER1_type 7 178 0 2532 103 17 3 chr10 98229286 98229645 -47359643 - THE1B LTR MaLR 0 364 1 345 332 37 37 chr10 98234125 98234369 -47354919 - L2 LINE L2 -245 3068 2825 215 269 77 13 chr10 98234687 98234765 -47354523 - MIR SINE MIR -2 260 178 183 373 0 13 chr10 98235184 98235259 -47354029 + L2 LINE L2 2644 2717 -597 28 0 0 0 chr10 98235277 98235305 -47353983 + AT_rich Low_complexity Low_complexity 1 28 0 1701 136 84 29 chr10 98235777 98236087 -47353201 + THE1B LTR MaLR 1 327 -37 5672 75 9 1 chr10 98236087 98236857 -47352431 + THE1B-int LTR MaLR 805 1580 0 2204 119 73 15 chr10 98236857 98237200 -47352088 + THE1B LTR MaLR 1 363 -1 211 302 23 23 chr10 98239335 98239421 -47349867 + MIR SINE MIR 171 256 -6 221 345 9 26 chr10 98239452 98239568 -47349720 + L2 LINE L2 2937 3050 -222 21 0 0 0 chr10 98239621 98239642 -47349646 + AT_rich Low_complexity Low_complexity 1 21 0 207 343 14 14 chr10 98239718 98239788 -47349500 - MIR SINE MIR -186 76 7 1944 89 183 113 chr10 98240123 98240163 -47349125 - MLT2A1 LTR ERVL 0 444 408 459 0 0 0 chr10 98240163 98240214 -47349074 + (TAGA)n Simple_repeat Simple_repeat 2 52 0 1944 89 183 113 chr10 98240214 98240588 -47348700 - MLT2A1 LTR ERVL -36 408 1 41895 77 5 1 chr10 98240588 98246222 -47343066 - HERVL-A1-A1 LTR ERVL 0 5654 1 2937 83 33 5 chr10 98246228 98246650 -47342638 - MLT2A1 LTR ERVL -10 434 1 509 316 89 77 chr10 98246833 98247248 -47342040 + L3 LINE CR1 941 1360 -217 207 0 0 0 chr10 98247774 98247797 -47341491 + (TG)n Simple_repeat Simple_repeat 1 23 0 615 296 46 42 chr10 98247972 98248232 -47341056 + MIR SINE MIR 2 262 0 265 152 0 22 chr10 98249528 98249574 -47339714 + L2 LINE L2 3265 3309 -4 710 198 66 24 chr10 98250044 98250211 -47339077 + MER5B DNA MER1_type 5 178 0 1911 131 7 13 chr10 98250388 98250686 -47338602 + AluSg SINE Alu 2 297 -13 539 308 35 25 chr10 98251234 98251432 -47337856 + MIR SINE MIR 6 205 -57 1537 201 7 14 chr10 98251821 98252114 -47337174 - AluJo SINE Alu -21 291 1 627 209 115 6 chr10 98252697 98252879 -47336409 + MER51D LTR ERV1 456 657 0 * 2308 111 26 92 chr10 98252879 98253333 -47335955 - MER65A LTR ERV1 -21 424 1 301 259 147 60 chr10 98253656 98253772 -47335516 - MIR SINE MIR -12 250 125 926 161 98 0 chr10 98253780 98253954 -47335334 - L1P4 LINE L1 -395 5771 5581 204 289 60 36 chr10 98253961 98254044 -47335244 - MIR SINE MIR -123 139 55 32 57 0 0 chr10 98254313 98254366 -47334922 + AT_rich Low_complexity Low_complexity 1 53 0 1976 223 73 6 chr10 98254386 98254852 -47334436 - MLT1D LTR MaLR -8 497 1 23 33 0 0 chr10 98254885 98254915 -47334373 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr10 98255868 98255890 -47333398 + AT_rich Low_complexity Low_complexity 1 22 0 215 77 0 26 chr10 98256064 98256103 -47333185 + (CA)n Simple_repeat Simple_repeat 1 38 0 261 245 0 128 chr10 98256149 98256243 -47333045 - MER5A DNA MER1_type -77 112 31 190 269 287 28 chr10 98256257 98256365 -47332923 + MER5A DNA MER1_type 31 166 -23 21 57 0 0 chr10 98257366 98257401 -47331887 + AT_rich Low_complexity Low_complexity 1 35 0 758 102 73 29 chr10 98257615 98257752 -47331536 + L1MA9 LINE L1 6145 6287 -25 1567 204 137 20 chr10 98258480 98258932 -47330356 - MLT1D LTR MaLR 0 505 1 554 312 116 10 chr10 98259242 98259534 -47329754 - MLT1I LTR MaLR -28 381 59 349 297 48 61 chr10 98259691 98259856 -47329432 + L1MEc LINE L1 1900 2062 -4334 947 264 101 52 chr10 98259866 98260461 -47328827 + L1MEc LINE L1 2357 2980 -3235 2497 263 54 53 chr10 98260711 98262422 -47326866 + L1ME3 LINE L1 241 1949 -4131 1880 172 0 0 chr10 98262422 98262713 -47326575 + AluSx SINE Alu 6 296 -16 2497 263 54 53 chr10 98262713 98263133 -47326155 + L1ME3 LINE L1 1949 2367 -3713 1548 190 13 25 chr10 98263133 98263449 -47325839 - AluJo SINE Alu 0 312 1 2497 263 54 53 chr10 98263449 98263846 -47325442 + L1ME3 LINE L1 2367 2890 -3190 2369 151 45 65 chr10 98263850 98264315 -47324973 - MLT2C2 LTR ERVL -7 457 2 6612 237 63 17 chr10 98264316 98266377 -47322911 + L1ME3 LINE L1 2886 5061 -1019 2151 145 0 0 chr10 98266377 98266687 -47322601 + AluSx SINE Alu 3 312 0 6612 237 63 17 chr10 98266687 98266894 -47322394 + L1ME3 LINE L1 5061 5257 -823 2026 251 40 51 chr10 98266993 98267800 -47321488 + L1ME3 LINE L1 5275 6072 -24 1947 175 40 32 chr10 98267807 98268354 -47320934 - MLT2A2 LTR ERVL 0 554 1 311 210 8 48 chr10 98268622 98268746 -47320542 + (TA)n Simple_repeat Simple_repeat 2 120 0 317 260 0 144 chr10 98269077 98269223 -47320065 + MIR SINE MIR 19 143 -65 260 320 26 59 chr10 98269415 98269568 -47319720 + MIR SINE MIR 31 178 -84 2122 92 0 17 chr10 98269687 98269980 -47319308 + AluY SINE Alu 11 298 -13 365 340 131 7 chr10 98271153 98271331 -47317957 + MIR3 SINE MIR 2 197 -11 723 248 131 0 chr10 98271554 98271752 -47317536 - MER58A DNA MER1_type 0 224 1 223 327 119 20 chr10 98271907 98272008 -47317280 + MIR SINE MIR 23 133 -75 206 245 128 11 chr10 98272166 98272260 -47317028 - MIR SINE MIR -58 204 100 446 281 149 18 chr10 98273095 98273316 -47315972 + MLT1H LTR MaLR 4 253 -296 249 212 76 15 chr10 98273327 98273393 -47315895 + L1MDa LINE L1 989 1058 -5482 6145 101 10 19 chr10 98273393 98274369 -47314919 + MER11C LTR ERVK 1 1057 -14 431 55 0 0 chr10 98274408 98274463 -47314825 - HERVK11 LTR ERVK -1590 6363 6309 4676 181 58 53 chr10 98274463 98275737 -47313551 + L1MDa LINE L1 1053 2333 -4207 257 260 0 0 chr10 98275716 98275789 -47313499 + L1MC4 LINE L1 7022 7094 -1342 * 229 208 28 0 chr10 98275790 98275862 -47313426 + (TA)n Simple_repeat Simple_repeat 1 74 0 469 171 133 13 chr10 98275883 98276041 -47313247 + L1MDa LINE L1 2322 2498 -4042 657 222 158 15 chr10 98276059 98276262 -47313026 + MIR SINE MIR 5 236 -26 305 270 40 0 chr10 98276323 98276423 -47312865 - L1ME LINE L1 -373 5748 5645 1003 302 0 0 chr10 98276669 98276891 -47312397 + MIR SINE MIR 4 225 -37 522 248 196 0 chr10 98278353 98278506 -47310782 + MIR SINE MIR 18 200 -62 1104 219 24 16 chr10 98278699 98278946 -47310342 + L1MC3 LINE L1 7040 7288 -497 1660 169 31 31 chr10 98279002 98279351 -47309937 + L1MC3 LINE L1 7436 7784 -1 343 294 35 0 chr10 98280574 98280659 -47308629 + MER20B DNA MER1_type 107 194 -589 242 98 0 20 chr10 98280670 98280721 -47308567 - L1MB4 LINE L1 0 6180 6131 22776 65 4 0 chr10 98280721 98284490 -47304798 - L1PA6 LINE L1 -7 6147 2367 5153 12 2 0 chr10 98284490 98285068 -47304220 - L1PA3 LINE L1 0 6155 5571 2774 79 2 8 chr10 98285068 98285462 -47303826 - L1PA6 LINE L1 -3764 2382 1991 2371 177 2 11 chr10 98285446 98285887 -47303401 - L1MB3 LINE L1 -42 6141 5705 * 2503 71 52 10 chr10 98285887 98286294 -47302994 + Tigger3(Golem) DNA MER2_type 2310 2733 -296 734 187 60 0 chr10 98286282 98286416 -47302872 - Tigger3b DNA MER2_type -718 514 373 * 371 169 0 0 chr10 98286431 98286490 -47302798 - AluJ/FRAM SINE Alu -12 290 232 * 480 119 0 0 chr10 98286488 98286555 -47302733 - Tigger3b DNA MER2_type -825 406 340 634 170 20 0 chr10 98286584 98286684 -47302604 - Tigger3b DNA MER2_type -1129 102 1 186 273 91 0 chr10 98286872 98286927 -47302361 + MIR SINE MIR 45 104 -104 2302 187 0 8 chr10 98287346 98287747 -47301541 + MER66B LTR ERV1 1 398 -88 1172 342 80 27 chr10 98288157 98288643 -47300645 + L2 LINE L2 2197 2656 -616 285 29 0 0 chr10 98288643 98288677 -47300611 + (CA)n Simple_repeat Simple_repeat 2 35 0 1172 342 80 27 chr10 98288677 98289189 -47300099 + L2 LINE L2 2656 3241 -31 342 261 33 0 chr10 98289212 98289304 -47299984 - L1MC4 LINE L1 -1341 6701 6607 2154 97 38 0 chr10 98289428 98289718 -47299570 + AluSx SINE Alu 1 301 -11 3243 161 9 47 chr10 98289999 98290575 -47298713 - MLT2B3 LTR ERVL 0 554 1 19065 158 19 10 chr10 98290587 98293734 -47295554 - ERVL-B3 LTR ERVL -19 5745 2571 6899 190 24 39 chr10 98293736 98295861 -47293427 + L1M3f LINE L1 10 2108 -4065 * 10315 189 20 10 chr10 98295859 98296638 -47292650 + L1M3f LINE L1 2806 3576 -2752 2083 138 138 5 chr10 98296638 98297016 -47292272 - MSTA LTR MaLR 0 428 1 10315 189 20 10 chr10 98297016 98298417 -47290871 + L1M3f LINE L1 3576 5007 -1321 6021 180 30 14 chr10 98298418 98300622 -47288666 + L1MA5 LINE L1 4069 6300 0 667 348 58 24 chr10 98300640 98301214 -47288074 + L1M4 LINE L1 3085 3677 -2469 296 365 52 0 chr10 98301269 98301384 -47287904 + L2 LINE L2 3150 3270 -2 1997 123 49 25 chr10 98301540 98301906 -47287382 - THE1C LTR MaLR 0 375 1 21 0 0 0 chr10 98301985 98302006 -47287282 + AT_rich Low_complexity Low_complexity 1 21 0 24 67 0 0 chr10 98302334 98302379 -47286909 + AT_rich Low_complexity Low_complexity 1 45 0 22 72 0 36 chr10 98303037 98303120 -47286168 + AT_rich Low_complexity Low_complexity 1 80 0 24 0 0 0 chr10 98303521 98303545 -47285743 + AT_rich Low_complexity Low_complexity 1 24 0 2027 133 0 33 chr10 98303761 98304063 -47285225 + AluSx SINE Alu 1 292 -20 394 314 46 51 chr10 98304256 98304431 -47284857 + L2 LINE L2 3090 3263 -9 237 269 104 22 chr10 98305318 98305452 -47283836 - MER117 DNA MER1_type -52 145 1 2082 120 0 0 chr10 98306865 98307141 -47282147 + AluSq SINE Alu 20 295 -18 2406 134 18 51 chr10 98308412 98308861 -47280427 - Tigger2a DNA MER2_type 0 434 1 435 19 0 0 chr10 98308879 98308931 -47280357 + (TG)n Simple_repeat Simple_repeat 1 52 0 1958 215 19 10 chr10 98308966 98309376 -47279912 - MLT2C2 LTR ERVL -50 414 1 1160 124 5 26 chr10 98309442 98309635 -47279653 - L1PB2 LINE L1 -2 6149 5961 275 338 0 0 chr10 98310648 98310728 -47278560 + L2 LINE L2 3188 3267 -5 765 175 70 6 chr10 98310901 98311072 -47278216 + MER105 DNA DNA 22 203 -1 326 257 10 40 chr10 98312382 98312483 -47276805 - MIR SINE MIR 0 262 165 1778 94 0 17 chr10 98312488 98312753 -47276535 - AluSq SINE Alu 0 315 55 1210 74 0 7 chr10 98312753 98312902 -47276386 - AluSq/x SINE Alu -165 148 1 333 203 95 0 chr10 98312904 98312978 -47276310 - MIR SINE MIR -101 161 81 264 59 0 0 chr10 98313106 98313140 -47276148 + (A)n Simple_repeat Simple_repeat 1 34 0 1085 264 4 16 chr10 98314138 98314396 -47274892 - MIR SINE MIR 0 262 8 824 172 12 41 chr10 98314648 98314817 -47274471 + FRAM SINE Alu 1 164 -2 259 260 14 0 chr10 98315249 98315322 -47273966 + L2 LINE L2 3235 3308 -5 485 283 151 10 chr10 98315588 98315793 -47273495 + MIR SINE MIR 17 250 -12 516 302 99 22 chr10 98316503 98316735 -47272553 - MIR SINE MIR -2 260 11 270 257 29 14 chr10 98317830 98317900 -47271388 + MIR3 SINE MIR 105 175 -33 389 90 15 0 chr10 98318977 98319044 -47270244 + (CA)n Simple_repeat Simple_repeat 1 68 0 274 270 140 36 chr10 98320468 98320775 -47268513 - L1MC4a LINE L1 -1907 5901 5563 369 330 45 99 chr10 98321087 98321404 -47267884 - L1MC4a LINE L1 -947 5199 4878 287 143 0 0 chr10 98321404 98321446 -47267842 - 5S rRNA rRNA -79 42 1 369 330 45 99 chr10 98321446 98321621 -47267667 - L1MC4a LINE L1 -1268 4878 4695 2929 98 5 12 chr10 98322979 98323408 -47265880 - L1PB2 LINE L1 -2 6149 5724 732 138 9 0 chr10 98323822 98323938 -47265350 - FRAM SINE Alu -5 171 55 2079 148 0 0 chr10 98323985 98324276 -47265012 - AluJb SINE Alu -21 291 1 192 163 0 122 chr10 98324348 98324397 -47264891 - L2 LINE L2 0 3272 3230 313 289 184 51 chr10 98324816 98324894 -47264394 - L1ME4a LINE L1 -130 5991 5925 2155 127 0 0 chr10 98324894 98325186 -47264102 - AluSx SINE Alu -20 292 1 313 289 184 51 chr10 98325186 98325422 -47263866 - L1ME4a LINE L1 -196 5925 5635 311 264 104 77 chr10 98326771 98326953 -47262335 - L1ME LINE L1 -375 5746 5560 25 0 0 0 chr10 98326976 98327001 -47262287 + AT_rich Low_complexity Low_complexity 1 25 0 10468 170 52 14 chr10 98327001 98327148 -47262140 - L1MA9 LINE L1 0 7333 7193 321 26 0 0 chr10 98327148 98327186 -47262102 + (TG)n Simple_repeat Simple_repeat 1 38 0 10468 170 52 14 chr10 98327186 98327725 -47261563 - L1MA9 LINE L1 -140 7193 6676 1979 174 42 146 chr10 98327725 98327939 -47261349 - LTR9 LTR ERV1 0 612 377 2319 89 3 10 chr10 98327939 98328252 -47261036 - AluY SINE Alu 0 311 1 1979 174 42 146 chr10 98328252 98328720 -47260568 - LTR9 LTR ERV1 -235 377 1 10468 170 52 14 chr10 98328720 98331213 -47258075 - L1MA9 LINE L1 -657 6676 3878 1509 118 4 4 chr10 98331217 98331454 -47257834 - Tigger3(Golem) DNA MER2_type -1 3028 2792 503 271 7 0 chr10 98331462 98331602 -47257686 - Tigger3(Golem) DNA MER2_type -2887 142 2 498 153 63 0 chr10 98331603 98331714 -47257574 - L1MA9 LINE L1 -3292 3875 3758 311 322 73 35 chr10 98331762 98332076 -47257212 - L1MA9 LINE L1 -5340 1828 1503 478 264 33 8 chr10 98333302 98333423 -47255865 - L2 LINE L2 0 3313 3190 279 180 0 0 chr10 98333474 98333524 -47255764 - ERVL-B2 LTR ERVL 0 5764 5715 201 94 0 0 chr10 98333919 98333951 -47255337 + (A)n Simple_repeat Simple_repeat 1 32 0 16825 161 37 14 chr10 98333973 98338658 -47250630 - ERVL-B2 LTR ERVL -57 5707 820 2701 219 70 14 chr10 98338992 98339651 -47249637 - ERVL-B2 LTR ERVL -5067 697 2 800 225 55 0 chr10 98339652 98339852 -47249436 - MLT2B2 LTR ERVL 0 515 305 28 29 0 0 chr10 98340002 98340037 -47249251 + AT_rich Low_complexity Low_complexity 1 35 0 6502 85 11 1 chr10 98340639 98341715 -47247573 + L1PA8 LINE L1 5080 6164 -8 245 246 0 0 chr10 98341745 98341802 -47247486 - HAL1b LINE L1 -81 1267 1211 321 301 7 22 chr10 98341825 98341961 -47247327 + (CATATA)n Simple_repeat Simple_repeat 5 138 0 1796 166 46 27 chr10 98342706 98343074 -47246214 + THE1C LTR MaLR 1 375 0 432 281 163 47 chr10 98343126 98343552 -47245736 - HAL1b LINE L1 -421 927 397 2383 96 0 3 chr10 98343552 98343866 -47245422 + AluSq SINE Alu 1 313 0 432 281 163 47 chr10 98343866 98344095 -47245193 - HAL1b LINE L1 -951 397 196 223 171 0 0 chr10 98344113 98344154 -47245134 + L2 LINE L2 3273 3313 0 372 274 77 53 chr10 98344157 98344431 -47244857 - HAL1b LINE L1 -1142 486 332 484 317 136 10 chr10 98346094 98346327 -47242961 + MIR SINE MIR 5 249 -13 776 291 28 24 chr10 98348507 98348761 -47240527 - MIR SINE MIR 0 262 8 379 219 24 0 chr10 98349212 98349294 -47239994 + L2 LINE L2 3229 3312 -1 888 119 8 0 chr10 98349963 98350089 -47239199 + AluSg/x SINE Alu 166 292 -17 199 279 0 16 chr10 98350093 98350154 -47239134 + MIR SINE MIR 164 223 -39 2251 109 146 8 chr10 98351261 98351637 -47237651 + MSTA LTR MaLR 1 428 0 255 287 51 31 chr10 98351869 98352064 -47237224 - L1ME4a LINE L1 -37 6084 5886 209 194 0 0 chr10 98352149 98352185 -47237103 + L2 LINE L2 3160 3195 -77 313 266 0 0 chr10 98352202 98352281 -47237007 - L1ME4a LINE L1 -336 5785 5707 1350 241 62 8 chr10 98352673 98353043 -47236245 - MLT1J2 LTR MaLR -8 442 53 232 250 20 50 chr10 98353337 98353437 -47235851 + LTR67 LTR ERVL 460 556 -1 263 196 18 0 chr10 98353557 98353613 -47235675 - L1ME4a LINE L1 -428 5693 5637 339 352 23 17 chr10 98354773 98354949 -47234339 + L1ME LINE L1 3679 3855 -2291 342 298 81 53 chr10 98355066 98355693 -47233595 + L1ME LINE L1 4015 4659 -1487 421 332 115 45 chr10 98355780 98356735 -47232553 + L1ME LINE L1 4753 5771 -350 1830 118 52 14 chr10 98356845 98357133 -47232155 - AluSx SINE Alu -13 299 1 750 198 74 59 chr10 98357430 98357506 -47231782 + HsTC2 DNA Tc2 1 74 -1824 2245 96 7 0 chr10 98357506 98357798 -47231490 + AluSg SINE Alu 1 294 -16 750 198 74 59 chr10 98357798 98357923 -47231365 + HsTC2 DNA Tc2 74 205 -1693 698 175 58 29 chr10 98357925 98358062 -47231226 - Tigger3(Golem) DNA MER2_type 0 3036 2896 408 134 149 0 chr10 98358060 98358127 -47231161 - Tigger3(Golem) DNA MER2_type -2952 77 1 * 916 282 36 40 chr10 98358168 98358748 -47230540 - MLT1G LTR MaLR -6 588 1 298 203 29 0 chr10 98358748 98358816 -47230472 + HsTC2 DNA Tc2 236 305 -1593 506 135 10 10 chr10 98358848 98358944 -47230344 + HsTC2 DNA Tc2 1742 1837 -61 494 237 124 21 chr10 98358954 98359140 -47230148 + LTR33 LTR ERVL 8 212 -309 244 208 0 0 chr10 98359324 98359372 -47229916 + HsTC2 DNA Tc2 1836 1883 -15 23 54 0 0 chr10 98360351 98360388 -47228900 + AT_rich Low_complexity Low_complexity 1 37 0 22 0 0 0 chr10 98360416 98360438 -47228850 + AT_rich Low_complexity Low_complexity 1 22 0 198 0 0 0 chr10 98361324 98361346 -47227942 + (A)n Simple_repeat Simple_repeat 1 22 0 1968 236 94 11 chr10 98361632 98362205 -47227083 + L1ME3 LINE L1 5533 6153 -9 281 305 114 67 chr10 98362589 98362799 -47226489 - L1MEd LINE L1 -5455 664 445 2082 127 43 27 chr10 98362897 98363266 -47226022 - THE1C LTR MaLR 0 375 1 493 213 158 16 chr10 98364239 98364398 -47224890 - MER5A DNA MER1_type 0 189 5 5151 28 2 0 chr10 98365347 98365947 -47223341 + L1PA3 LINE L1 5552 6152 -3 21 0 0 0 chr10 98366017 98366038 -47223250 + AT_rich Low_complexity Low_complexity 1 21 0 505 294 61 17 chr10 98366394 98366625 -47222663 + L1ME3A LINE L1 5401 5641 -523 1259 221 90 77 chr10 98366633 98367334 -47221954 - Charlie2 DNA MER1_type -3 2859 2150 * 2696 236 91 16 chr10 98367328 98368110 -47221178 - Charlie2b DNA MER1_type -1519 1263 422 356 120 10 140 chr10 98368110 98368210 -47221078 + MER53 DNA DNA 4 90 -99 417 313 46 32 chr10 98368654 98368871 -47220417 + L1ME3A LINE L1 5694 5913 -257 635 220 13 33 chr10 98369061 98369211 -47220077 - MIR SINE MIR -37 225 79 23 33 0 0 chr10 98369246 98369276 -47220012 + AT_rich Low_complexity Low_complexity 1 30 0 1651 218 142 4 chr10 98370499 98370949 -47218339 - MLT2B1 LTR ERVL -8 512 1 759 161 0 46 chr10 98371241 98371371 -47217917 + FLAM_C SINE Alu 1 124 -19 31 0 0 0 chr10 98371371 98371402 -47217886 + AT_rich Low_complexity Low_complexity 1 31 0 280 244 116 47 chr10 98371449 98371535 -47217753 + MIR SINE MIR 96 187 -75 207 0 0 0 chr10 98371591 98371614 -47217674 + (CA)n Simple_repeat Simple_repeat 2 24 0 647 147 60 0 chr10 98371803 98371919 -47217369 + L1MA4 LINE L1 6015 6137 -163 2533 126 44 15 chr10 98371925 98372425 -47216863 - MER73 LTR ERVL -63 581 5 398 302 5 99 chr10 98372706 98372908 -47216380 + MER5A DNA MER1_type 2 184 -5 272 241 24 60 chr10 98373687 98373770 -47215518 + MIR3 SINE MIR 107 186 -22 302 259 35 77 chr10 98374908 98375051 -47214237 - L2 LINE L2 -6 3307 3171 21 57 0 0 chr10 98376436 98376471 -47212817 + AT_rich Low_complexity Low_complexity 1 35 0 232 282 107 39 chr10 98379781 98379884 -47209404 + L2 LINE L2 3148 3257 -15 718 194 19 120 chr10 98380061 98380277 -47209011 - MER20 DNA MER1_type -24 195 2 228 308 161 69 chr10 98380286 98380553 -47208735 + L2 LINE L2 2770 3055 -217 1998 199 3 6 chr10 98380652 98381018 -47208270 - MLT1A1 LTR MaLR 0 365 1 922 223 53 0 chr10 98381225 98381431 -47207857 + MER58A DNA MER1_type 8 224 0 665 289 77 12 chr10 98381535 98381781 -47207507 + MIR SINE MIR 1 262 0 1523 238 69 7 chr10 98382061 98382468 -47206820 + MER110 LTR ERV1 46 477 -14 329 325 26 0 chr10 98382576 98382693 -47206595 + MIR SINE MIR 51 170 -92 281 349 38 9 chr10 98382744 98382850 -47206438 - L2 LINE L2 -17 3255 3147 371 309 95 18 chr10 98383068 98383236 -47206052 + MIR3 SINE MIR 3 183 -25 906 164 38 0 chr10 98383656 98383815 -47205473 - FRAM SINE Alu -12 164 1 406 280 80 13 chr10 98385195 98385345 -47203943 - MIR SINE MIR -77 185 26 234 91 0 0 chr10 98385679 98385712 -47203576 + (TTA)n Simple_repeat Simple_repeat 2 34 0 358 307 0 0 chr10 98386387 98386488 -47202800 - L2 LINE L2 0 3313 3213 243 333 0 0 chr10 98386795 98386858 -47202430 + polypurine Low_complexity Low_complexity 4 66 0 485 325 142 30 chr10 98387688 98388230 -47201058 + L1ME LINE L1 4245 4847 -1299 845 128 0 0 chr10 98388765 98388882 -47200406 + FLAM_C SINE Alu 2 118 -15 204 40 0 0 chr10 98388888 98388913 -47200375 + (GA)n Simple_repeat Simple_repeat 2 26 0 301 274 108 3 chr10 98388914 98389126 -47200162 + L1P4 LINE L1 5364 5602 -566 229 291 71 16 chr10 98389117 98389299 -47199989 + L1ME LINE L1 5633 5824 -297 * 181 211 58 39 chr10 98390487 98390539 -47198749 + MER5A DNA MER1_type 29 81 -108 384 301 127 19 chr10 98390573 98390832 -47198456 - L3 LINE CR1 -640 937 651 648 257 57 33 chr10 98390864 98391109 -47198179 + MER112 DNA MER1_type 8 258 -2 2185 230 86 56 chr10 98391114 98391862 -47197426 + L1ME3A LINE L1 5377 6146 -24 285 180 16 0 chr10 98392277 98392338 -47196950 - MLT1E3 LTR MaLR 0 624 563 200 33 0 33 chr10 98392355 98392385 -47196903 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 2277 104 3 0 chr10 98393580 98393888 -47195400 + AluSg SINE Alu 1 309 -1 2111 229 81 102 chr10 98393986 98394420 -47194868 + HAL1b LINE L1 90 532 -816 2514 57 3 3 chr10 98394420 98394721 -47194567 + AluSp SINE Alu 1 301 -12 2111 229 81 102 chr10 98394721 98394889 -47194399 + HAL1b LINE L1 532 702 -646 2884 10 0 0 chr10 98394889 98395201 -47194087 + AluYb8 SINE Alu 1 312 -6 2111 229 81 102 chr10 98395201 98395533 -47193755 + HAL1b LINE L1 702 993 -355 3876 103 40 11 chr10 98395533 98396113 -47193175 + L1MA5A LINE L1 5651 6252 -45 2057 135 0 3 chr10 98396113 98396417 -47192871 + AluSx SINE Alu 1 303 -9 3876 103 40 11 chr10 98396417 98396460 -47192828 + L1MA5A LINE L1 6252 6292 -5 2111 229 81 102 chr10 98396460 98396809 -47192479 + HAL1b LINE L1 993 1348 0 280 130 0 0 chr10 98396884 98396930 -47192358 - L1MA9 LINE L1 -69 7662 7617 12404 185 57 27 chr10 98397105 98397138 -47192150 - L1MA9 LINE L1 -117 7614 7583 336 48 0 0 chr10 98397138 98397180 -47192108 + (TG)n Simple_repeat Simple_repeat 1 42 0 12404 185 57 27 chr10 98397180 98398970 -47190318 - L1MA9 LINE L1 -148 7583 5848 6757 69 22 4 chr10 98398970 98399950 -47189338 - L1PA8 LINE L1 -8 6164 5175 12404 185 57 27 chr10 98399950 98402316 -47186972 - L1MA9 LINE L1 -1883 5848 3301 706 309 96 10 chr10 98402326 98402617 -47186671 - L1MA9 LINE L1 -5127 2369 2054 708 256 45 15 chr10 98403020 98403219 -47186069 + MLT1H1 LTR MaLR 1 205 -350 260 276 26 13 chr10 98403317 98403393 -47185895 - MLT1I LTR MaLR -308 247 171 362 307 96 55 chr10 98403398 98403857 -47185431 + L2 LINE L2 2226 2703 -611 840 245 41 21 chr10 98403938 98404228 -47185060 - L1MC4a LINE L1 -1753 6055 5760 21 36 0 0 chr10 98405333 98405361 -47183927 + AT_rich Low_complexity Low_complexity 1 28 0 243 127 113 42 chr10 98405433 98405504 -47183784 + MER52C LTR ERV1 8 83 -1195 6930 173 31 47 chr10 98405859 98407416 -47181872 + MER52A LTR ERV1 345 1755 0 21 36 0 0 chr10 98407482 98407510 -47181778 + AT_rich Low_complexity Low_complexity 1 28 0 538 276 127 13 chr10 98408297 98408525 -47180763 - MIR SINE MIR 0 262 9 3857 129 35 7 chr10 98408839 98409442 -47179846 - L1MA2 LINE L1 -1 6303 5684 289 276 53 46 chr10 98409546 98409698 -47179590 - MLT1K LTR MaLR -4 584 432 234 163 20 20 chr10 98409728 98409777 -47179511 - L3 LINE CR1 -490 1087 1039 721 286 122 23 chr10 98410130 98410434 -47178854 - MLT1L LTR MaLR -102 513 180 622 317 93 23 chr10 98410895 98411243 -47178045 - L2 LINE L2 -292 3021 2641 1028 196 73 48 chr10 98411366 98411682 -47177606 - MER33 DNA MER1_type 0 324 1 2263 86 0 0 chr10 98412719 98412999 -47176289 + AluSg SINE Alu 1 280 -30 3056 116 7 36 chr10 98413678 98414119 -47175169 + MSTC LTR MaLR 1 428 0 348 273 128 27 chr10 98415180 98415367 -47173921 - MLT1I LTR MaLR -203 206 1 822 173 8 0 chr10 98415619 98415746 -47173542 + FLAM_C SINE Alu 2 129 -14 2446 80 0 3 chr10 98415773 98416075 -47173213 + AluSx SINE Alu 1 301 -11 251 273 99 37 chr10 98416652 98416813 -47172475 - L1ME4a LINE L1 -104 6017 5847 373 376 6 0 chr10 98417797 98417962 -47171326 + MIR SINE MIR 86 251 -11 225 94 0 0 chr10 98417969 98418001 -47171287 + (ATG)n Simple_repeat Simple_repeat 3 34 0 180 0 0 0 chr10 98418137 98418157 -47171131 + (TAAA)n Simple_repeat Simple_repeat 4 23 0 1012 305 112 52 chr10 98418330 98419188 -47170100 - L1MEd LINE L1 -5194 925 17 428 296 50 20 chr10 98419845 98420044 -47169244 + MIR SINE MIR 46 250 -12 632 333 63 42 chr10 98420438 98420771 -47168517 + L2 LINE L2 2933 3272 0 392 143 90 158 chr10 98422642 98422728 -47166560 - L2 LINE L2 -2 3311 3236 2159 121 0 13 chr10 98422728 98423034 -47166254 + AluSg SINE Alu 2 303 -7 392 143 90 158 chr10 98423034 98423080 -47166208 - L2 LINE L2 -77 3236 3188 501 206 10 0 chr10 98423098 98423200 -47166088 - MIR SINE MIR -35 227 125 566 272 41 0 chr10 98423236 98423383 -47165905 - MIR SINE MIR -108 154 2 261 341 12 0 chr10 98424409 98424494 -47164794 + L2 LINE L2 2970 3055 -217 643 271 18 18 chr10 98425267 98425437 -47163851 + MIR SINE MIR 12 181 -81 282 194 0 0 chr10 98426323 98426390 -47162898 + GA-rich Low_complexity Low_complexity 2 68 0 203 125 21 21 chr10 98427866 98427914 -47161374 + T-rich Low_complexity Low_complexity 1 48 0 263 216 0 0 chr10 98428083 98428134 -47161154 + Tigger5 DNA MER2_type 3 53 -2270 424 200 0 12 chr10 98428139 98428219 -47161069 - Tigger5 DNA MER2_type -3 2320 2242 1837 238 10 24 chr10 98428306 98428811 -47160477 + L1 LINE L1 4880 5377 -769 40 73 0 0 chr10 98428966 98429048 -47160240 + AT_rich Low_complexity Low_complexity 1 82 0 2032 152 66 32 chr10 98429121 98429649 -47159639 - MLT2A2 LTR ERVL 0 554 5 3304 137 11 35 chr10 98429675 98429996 -47159292 - Tigger3b DNA MER2_type -2491 537 233 1737 167 6 43 chr10 98429996 98430320 -47158968 - AluJo SINE Alu 0 312 1 3304 137 11 35 chr10 98430320 98430546 -47158742 - Tigger3b DNA MER2_type -2795 233 3 1761 126 19 0 chr10 98430548 98430819 -47158469 - L1M2 LINE L1 -525 5787 5512 4221 103 6 50 chr10 98431125 98431763 -47157525 - MER4B LTR ERV1 0 610 1 1250 177 157 4 chr10 98431987 98432236 -47157052 + AluJo SINE Alu 1 287 -25 2207 87 0 14 chr10 98432259 98432546 -47156742 + AluY SINE Alu 14 296 -15 343 225 50 0 chr10 98432734 98432814 -47156474 - MIR3 SINE MIR -2 206 123 1690 226 72 19 chr10 98433284 98433660 -47155628 - MSTD LTR MaLR 0 396 1 491 271 14 7 chr10 98433822 98433962 -47155326 - MER5B DNA MER1_type 0 178 38 1328 176 58 8 chr10 98433962 98434223 -47155065 + AluJb SINE Alu 1 274 -38 3832 109 11 65 chr10 98434223 98434857 -47154431 + LTR8 LTR ERV1 1 600 -91 405 0 0 0 chr10 98434857 98434902 -47154386 + (TGAA)n Simple_repeat Simple_repeat 4 48 0 183 222 22 0 chr10 98434903 98434948 -47154340 - MER5B DNA MER1_type -132 46 1 1129 222 87 17 chr10 98435399 98435834 -47153454 + L1ME LINE L1 5197 5674 -490 2976 119 67 68 chr10 98435834 98436420 -47152868 + LTR59 LTR ERV1 1 585 -12 323 247 39 41 chr10 98436653 98436822 -47152466 + MER4-int LTR ERV1 373 589 -6009 358 158 26 26 chr10 98436938 98437014 -47152274 + MER4D LTR ERV1 284 359 -544 304 159 0 0 chr10 98437003 98437047 -47152241 + LTR49 LTR ERV1 165 208 -387 * 886 121 21 14 chr10 98437041 98437181 -47152107 + MER39B LTR ERV1 513 653 0 1867 213 112 101 chr10 98437182 98438397 -47150891 + MER39B-int LTR ERV1 1 1917 -2963 198 0 0 0 chr10 98438515 98438537 -47150751 + (T)n Simple_repeat Simple_repeat 1 22 0 4216 171 14 1 chr10 98438557 98439259 -47150029 - MER50 LTR ERV1 -23 711 1 418 191 0 0 chr10 98439261 98439329 -47149959 + MER4B-int LTR ERV1 1404 1471 -4860 2204 201 84 83 chr10 98439329 98440111 -47149177 + LTR1B LTR ERV1 1 783 -43 1549 231 42 104 chr10 98440126 98440772 -47148516 + MER4B-int LTR ERV1 2492 3097 -4440 479 183 2 12 chr10 98440765 98440888 -47148400 + MER4B-int LTR ERV1 2535 2721 -3225 * 443 245 136 34 chr10 98440892 98441039 -47148249 + MER34C LTR ERV1 155 316 -269 4533 173 39 48 chr10 98441049 98441835 -47147453 + MER4B-int LTR ERV1 1834 2625 -3070 2596 45 0 13 chr10 98441835 98442147 -47147141 + AluY SINE Alu 1 308 -3 4533 173 39 48 chr10 98442147 98442753 -47146535 + MER4B-int LTR ERV1 2625 3767 -1928 3634 71 0 2 chr10 98442807 98443256 -47146032 + LTR7 LTR ERV1 1 448 -2 17454 92 25 22 chr10 98443258 98446927 -47142361 + HERVH LTR ERV1 1 3746 -3967 1144 42 0 0 chr10 98446922 98447066 -47142222 + HERVH LTR ERV1 3850 3993 -3720 * 4481 142 0 1 chr10 98447068 98447731 -47141557 + HERVH LTR ERV1 4488 5149 -2564 1446 120 18 5 chr10 98447732 98447949 -47141339 + HERVH LTR ERV1 5600 5819 -1894 * 2491 73 43 14 chr10 98447947 98448316 -47140972 + HERVH LTR ERV1 7322 7701 -12 2865 164 23 62 chr10 98448316 98448328 -47140960 + LTR9 LTR ERV1 7 18 -594 3789 53 0 2 chr10 98448328 98448777 -47140511 + LTR7 LTR ERV1 1 448 -2 1937 129 0 0 chr10 98448779 98449058 -47140230 + AluSx SINE Alu 22 300 -12 2865 164 23 62 chr10 98449058 98449670 -47139618 + LTR9 LTR ERV1 19 612 0 5757 181 28 45 chr10 98449671 98450598 -47138690 + LTR59-int LTR ERV1 747 1688 -5070 2128 116 0 0 chr10 98450598 98450890 -47138398 - AluSx SINE Alu 0 312 21 5757 181 28 45 chr10 98450890 98451047 -47138241 + LTR59-int LTR ERV1 1688 1846 -4912 1291 126 70 28 chr10 98451047 98451262 -47138026 + L1PA11 LINE L1 5951 6174 0 5757 181 28 45 chr10 98451262 98451789 -47137499 + LTR59-int LTR ERV1 1846 5227 -1531 413 95 191 24 chr10 98451783 98451867 -47137421 + LTR59-int LTR ERV1 4887 4984 -1347 * 2514 174 57 48 chr10 98451855 98452396 -47136892 + LTR59-int LTR ERV1 5557 6102 -656 1377 188 20 10 chr10 98452395 98452666 -47136622 + LTR59-int LTR ERV1 6567 6758 0 * 3065 136 60 72 chr10 98452667 98453265 -47136023 + LTR59 LTR ERV1 1 591 -6 1194 236 78 3 chr10 98453265 98453609 -47135679 + L1ME1 LINE L1 5668 6037 -129 1507 184 42 113 chr10 98453609 98453799 -47135489 + MSTD LTR MaLR 1 203 -193 1983 129 43 0 chr10 98453799 98454079 -47135209 + AluSx SINE Alu 6 297 -15 1507 184 42 113 chr10 98454079 98454259 -47135029 + MSTD LTR MaLR 203 340 -56 2253 150 135 8 chr10 98454259 98454638 -47134650 + MSTA LTR MaLR 2 428 0 1507 184 42 113 chr10 98454638 98454690 -47134598 + MSTD LTR MaLR 340 394 -2 265 243 7 100 chr10 98454698 98454838 -47134450 + L1MB7 LINE L1 6049 6175 -9 27 29 0 0 chr10 98454841 98454875 -47134413 + AT_rich Low_complexity Low_complexity 1 34 0 447 205 0 0 chr10 98456292 98456370 -47132918 - Tigger5 DNA MER2_type -2244 79 2 290 169 70 0 chr10 98456425 98456496 -47132792 - MIR SINE MIR -73 189 114 22057 132 42 16 chr10 98456538 98456624 -47132664 + L1M1 LINE L1 8 90 -7475 333 82 0 0 chr10 98456624 98456673 -47132615 + (CA)n Simple_repeat Simple_repeat 2 50 0 22057 132 42 16 chr10 98456673 98457189 -47132099 + L1M1 LINE L1 90 592 -6973 2056 144 144 24 chr10 98457189 98457571 -47131717 + MSTA LTR MaLR 1 428 0 9815 140 17 43 chr10 98457573 98459192 -47130096 + MSTA-int LTR MaLR 3 1580 0 2029 167 143 11 chr10 98459192 98459570 -47129718 + MSTA LTR MaLR 1 428 0 22057 132 42 16 chr10 98459570 98462198 -47127090 + L1M1 LINE L1 592 3153 -4412 2273 84 0 0 chr10 98462198 98462484 -47126804 + AluY SINE Alu 25 310 -1 22057 132 42 16 chr10 98462484 98462543 -47126745 + L1M1 LINE L1 3153 3209 -4356 198 0 0 0 chr10 98462543 98462565 -47126723 + (CAAAA)n Simple_repeat Simple_repeat 1 22 0 22057 132 42 16 chr10 98462565 98462783 -47126505 + L1M1 LINE L1 3209 3610 -3955 845 157 0 61 chr10 98462783 98462930 -47126358 + AluJo SINE Alu 2 139 -173 10702 170 49 57 chr10 98462930 98464899 -47124389 + L1M1 LINE L1 3595 5541 -2024 1494 48 59 0 chr10 98464899 98465085 -47124203 - L1PA7 LINE L1 -2 6152 5956 10702 170 49 57 chr10 98465085 98465611 -47123677 + L1M1 LINE L1 5541 6070 -1495 2046 133 3 7 chr10 98466022 98466324 -47122964 + AluJb SINE Alu 1 301 -11 341 269 83 0 chr10 98466484 98466592 -47122696 + MIR3 SINE MIR 58 174 -34 325 209 139 0 chr10 98466592 98466678 -47122610 - LTR33 LTR ERVL 0 521 424 8995 112 110 30 chr10 98466687 98468260 -47121028 - pTR5 LTR ERV1 0 2438 741 182 167 0 0 chr10 98468584 98468614 -47120674 + MIR3 SINE MIR 169 198 -10 514 229 174 35 chr10 98468873 98469074 -47120214 + MIR SINE MIR 8 236 -26 237 355 20 33 chr10 98469682 98469834 -47119454 - L2 LINE L2 0 3272 3123 593 245 164 101 chr10 98469935 98470442 -47118846 - MLT1H LTR MaLR -3 546 8 543 333 88 74 chr10 98471110 98471461 -47117827 - L2 LINE L2 -3 3269 2914 1567 191 10 17 chr10 98472033 98472327 -47116961 - AluJo SINE Alu -20 292 1 191 269 164 37 chr10 98472331 98472465 -47116823 - MIR SINE MIR -61 201 51 262 257 140 66 chr10 98472746 98472882 -47116406 - L2 LINE L2 0 3313 3168 1344 184 65 5 chr10 98472882 98473202 -47116086 + MSTD LTR MaLR 1 396 0 195 219 24 0 chr10 98473225 98473266 -47116022 - MIR SINE MIR -134 74 33 1911 300 214 6 chr10 98473278 98474561 -47114727 + L2 LINE L2 1768 3297 -16 187 302 151 12 chr10 98475501 98475587 -47113701 + L2 LINE L2 3175 3272 0 209 169 17 0 chr10 98475636 98475695 -47113593 + CT-rich Low_complexity Low_complexity 2 61 0 342 0 0 0 chr10 98475695 98475733 -47113555 + (CA)n Simple_repeat Simple_repeat 1 38 0 284 100 0 0 chr10 98475860 98475900 -47113388 + MIR SINE MIR 121 160 -102 514 319 39 17 chr10 98476210 98476442 -47112846 - MIR SINE MIR -2 260 24 219 289 24 36 chr10 98476417 98476500 -47112788 + L2 LINE L2 3152 3233 -39 * 574 255 6 32 chr10 98476547 98476704 -47112584 + MIR SINE MIR 8 160 -102 253 240 0 0 chr10 98476752 98476802 -47112486 + MER46C DNA MER2_type 1 50 -288 1291 174 29 4 chr10 98476826 98477067 -47112221 - MLT1D LTR MaLR 0 505 259 233 211 0 0 chr10 98477058 98477096 -47112192 + MER46C DNA MER2_type 287 324 -14 * 24 32 0 0 chr10 98477098 98477129 -47112159 + AT_rich Low_complexity Low_complexity 1 31 0 2069 146 3 0 chr10 98477235 98477537 -47111751 + AluSx SINE Alu 1 303 -9 1821 184 30 43 chr10 98477564 98477934 -47111354 + MLT1A1 LTR MaLR 1 365 0 215 267 119 62 chr10 98477936 98478112 -47111176 + MIR SINE MIR 32 217 -45 384 202 35 0 chr10 98478614 98478728 -47110560 + CT-rich Low_complexity Low_complexity 1 118 0 201 310 0 14 chr10 98478729 98478800 -47110488 - L2 LINE L2 -3 3310 3241 314 235 0 10 chr10 98479171 98479269 -47110019 + GA-rich Low_complexity Low_complexity 4 100 0 1918 175 24 15 chr10 98479296 98479634 -47109654 + MER58B DNA MER1_type 1 341 0 240 314 123 84 chr10 98479636 98479754 -47109534 - L2 LINE L2 -478 2836 2724 720 260 35 0 chr10 98479754 98479923 -47109365 - MER5B DNA MER1_type 0 178 4 240 314 123 84 chr10 98479923 98479961 -47109327 - L2 LINE L2 -590 2724 2689 2604 58 0 6 chr10 98479961 98480274 -47109014 + AluY SINE Alu 1 311 0 240 314 123 84 chr10 98480274 98480295 -47108993 - L2 LINE L2 -625 2689 2670 687 207 40 40 chr10 98480295 98480469 -47108819 + MER5B DNA MER1_type 1 174 -4 240 314 123 84 chr10 98480469 98480777 -47108511 - L2 LINE L2 -644 2670 2330 210 348 22 0 chr10 98481067 98481159 -47108129 + MIR SINE MIR 162 255 -7 1499 183 119 18 chr10 98481578 98481906 -47107382 - MER46B DNA MER2_type 0 236 1 1169 244 29 65 chr10 98482017 98482403 -47106885 - MLT1J LTR MaLR -139 372 1 349 310 39 0 chr10 98482627 98482756 -47106532 + MIR SINE MIR 53 186 -76 225 308 70 32 chr10 98483393 98483578 -47105710 - L1ME3A LINE L1 -7 6163 5972 2124 88 33 26 chr10 98483580 98483887 -47105401 - AluSp SINE Alu -4 309 1 244 275 33 11 chr10 98483957 98484048 -47105240 - L1ME3A LINE L1 -220 5950 5858 408 267 46 20 chr10 98484051 98484246 -47105042 + L1MC5 LINE L1 7727 7926 -35 267 273 39 0 chr10 98484245 98484322 -47104966 - L1ME3A LINE L1 -291 5879 5800 * 365 213 12 12 chr10 98484326 98484406 -47104882 + MER5A DNA MER1_type 7 86 -103 1299 182 76 0 chr10 98485440 98485676 -47103612 + Tigger7 DNA MER2_type 14 267 -466 492 129 0 0 chr10 98485676 98485746 -47103542 + Tigger7 DNA MER2_type 2487 2556 -31 296 301 54 0 chr10 98485782 98485875 -47103413 - MIR3 SINE MIR -26 182 85 316 191 15 15 chr10 98486245 98486313 -47102975 - MLT1B LTR MaLR 0 390 323 271 190 127 13 chr10 98486339 98486397 -47102891 - MLT1A2 LTR MaLR -160 214 132 2321 104 0 13 chr10 98486397 98486713 -47102575 - AluSx SINE Alu 0 312 1 271 190 127 13 chr10 98486713 98486733 -47102555 - MLT1A2 LTR MaLR -242 132 116 324 233 0 14 chr10 98486833 98486906 -47102382 - MLT1A2 LTR MaLR -301 73 2 21 0 0 0 chr10 98488431 98488452 -47100836 + AT_rich Low_complexity Low_complexity 1 21 0 241 255 0 19 chr10 98488483 98488589 -47100699 + L2 LINE L2 3133 3313 0 192 306 16 0 chr10 98489061 98489123 -47100165 - L2 LINE L2 0 3313 3251 * 326 177 146 52 chr10 98489114 98489210 -47100078 - L2 LINE L2 -950 2364 2260 596 294 241 6 chr10 98489235 98489579 -47099709 - L2 LINE L2 -1159 2155 1731 1900 143 3 7 chr10 98489788 98490081 -47099207 - AluSx SINE Alu -20 292 1 326 278 129 113 chr10 98490092 98490480 -47098808 - L2 LINE L2 -1 3271 2878 580 250 0 0 chr10 98490576 98490688 -47098600 - MER58 DNA MER1_type -2306 114 3 2515 268 147 43 chr10 98490690 98491871 -47097417 - Charlie8 DNA MER1_type -457 1960 657 2187 184 30 73 chr10 98491871 98492404 -47096884 + MLT2B1 LTR ERVL 1 510 -10 930 257 55 20 chr10 98492408 98492754 -47096534 - Charlie8 DNA MER1_type -1755 662 305 1050 104 0 0 chr10 98493887 98494022 -47095266 - AluSp/q SINE Alu -15 298 164 1521 161 29 29 chr10 98494022 98494301 -47094987 - AluJo SINE Alu -25 287 9 290 194 36 29 chr10 98494448 98494587 -47094701 + CT-rich Low_complexity Low_complexity 1 140 0 3806 144 41 22 chr10 98495062 98495777 -47093511 + L1 LINE L1 4130 4857 -1289 1604 132 71 17 chr10 98495785 98496081 -47093207 + L1MA6 LINE L1 5989 6300 0 309 148 136 34 chr10 98496411 98496499 -47092789 + MER5C DNA MER1_type 2 98 -226 279 182 261 0 chr10 98496510 98496598 -47092690 + FLAM_C SINE Alu 22 132 -1 262 184 20 0 chr10 98496910 98496959 -47092329 + MER5C DNA MER1_type 275 324 0 2963 69 13 8 chr10 98597482 98597874 -46991414 - L1PA6 LINE L1 -82 6072 5679 2215 92 11 0 chr10 98598371 98598655 -46990633 + AluSc SINE Alu 1 287 -22 268 258 79 0 chr10 98599944 98600033 -46989255 + MIR3 SINE MIR 102 197 -11 223 260 91 0 chr10 98601210 98601287 -46988001 + MIR SINE MIR 56 139 -123 1652 179 7 19 chr10 98601890 98602197 -46987091 + AluJo SINE Alu 1 303 -9 13182 128 11 34 chr10 98604071 98607273 -46982015 - L1P3 LINE L1 -3253 3208 2 1553 173 9 47 chr10 98607277 98607595 -46981693 - AluJb SINE Alu -6 306 1 1941 226 55 26 chr10 98607667 98607736 -46981552 + MLT1D LTR MaLR 1 67 -438 498 108 0 0 chr10 98607736 98607810 -46981478 + (TA)n Simple_repeat Simple_repeat 1 74 0 1941 226 55 26 chr10 98607810 98608231 -46981057 + MLT1D LTR MaLR 67 505 0 1355 354 50 28 chr10 98608495 98609459 -46979829 - ERVL LTR ERVL -403 5361 4377 6998 149 25 3 chr10 98609491 98610613 -46978675 - Ricksha DNA DNA -40 3206 2060 422 158 13 0 chr10 98610613 98610689 -46978599 - MLT2B3 LTR ERVL -469 85 9 789 133 83 4 chr10 98610689 98610930 -46978358 - Ricksha DNA DNA -1693 353 2 * 3119 312 95 21 chr10 98610930 98612422 -46976866 - ERVL LTR ERVL -1384 4380 2776 191 163 82 20 chr10 98612651 98612700 -46976588 - MIR SINE MIR -121 141 90 228 274 48 24 chr10 98612832 98612916 -46976372 - L3 LINE CR1 -3 1574 1489 532 283 91 40 chr10 98612989 98613286 -46976002 - MLT1H LTR MaLR 0 549 238 258 356 144 0 chr10 98613472 98613632 -46975656 + MIR SINE MIR 48 230 -32 271 312 23 11 chr10 98613955 98614063 -46975225 + MIR SINE MIR 17 126 -82 1196 46 13 20 chr10 98614303 98614456 -46974832 - L1PA6 LINE L1 -4 6150 5999 7609 56 1 2 chr10 98614561 98615870 -46973418 + L1PA7 LINE L1 4847 6151 -3 286 255 32 21 chr10 98615985 98616079 -46973209 + LTR16C LTR ERVL 257 351 -140 2159 271 96 44 chr10 98616082 98616695 -46972593 + L2 LINE L2 2194 2773 -540 2112 125 3 0 chr10 98616695 98616990 -46972298 + AluSq SINE Alu 1 296 -17 2159 271 96 44 chr10 98616990 98617004 -46972284 + L2 LINE L2 2773 2785 -528 1528 201 23 0 chr10 98617004 98617303 -46971985 + AluJo SINE Alu 1 306 -6 2159 271 96 44 chr10 98617303 98617720 -46971568 + L2 LINE L2 2785 3291 -22 1842 178 0 0 chr10 98618424 98618716 -46970572 + AluJb SINE Alu 1 292 -20 297 230 104 35 chr10 98618756 98618908 -46970380 - MLT1H LTR MaLR -7 583 375 1602 197 19 3 chr10 98618918 98619227 -46970061 - MER58B DNA MER1_type -1 340 27 764 270 34 30 chr10 98619281 98619559 -46969729 - MLT1H LTR MaLR -229 320 1 1431 171 61 0 chr10 98619570 98619833 -46969455 + MLT1C LTR MaLR 3 281 -186 1859 174 7 83 chr10 98619837 98619868 -46969420 - MLT1B LTR MaLR -4 386 354 1841 159 61 12 chr10 98619868 98620194 -46969094 + MER2 DNA MER2_type 2 343 -1 1859 174 7 83 chr10 98620194 98620571 -46968717 - MLT1B LTR MaLR -36 354 9 989 209 22 0 chr10 98620569 98620751 -46968537 + MLT1C LTR MaLR 277 462 -5 * 6712 96 20 3 chr10 98621087 98622240 -46967048 + L1PA11 LINE L1 5006 6173 -1 2193 109 0 10 chr10 98622327 98622621 -46966667 + AluSc SINE Alu 1 291 -18 2239 113 7 3 chr10 98622816 98623125 -46966163 - AluSg SINE Alu 0 310 1 234 317 179 0 chr10 98623174 98623297 -46965991 - MIR SINE MIR -110 152 8 24 0 0 0 chr10 98623431 98623455 -46965833 + AT_rich Low_complexity Low_complexity 1 24 0 416 274 18 9 chr10 98623798 98623931 -46965357 + MIR SINE MIR 23 155 -61 1812 151 10 39 chr10 98624556 98624861 -46964427 + AluJb SINE Alu 1 296 -16 1689 249 103 15 chr10 98625498 98625972 -46963316 + MER20B DNA MER1_type 1 516 -267 440 233 107 89 chr10 98626080 98626350 -46962938 + MER20B DNA MER1_type 509 783 0 243 333 28 28 chr10 98627232 98627340 -46961948 + MIR3 SINE MIR 53 160 -48 1692 200 7 0 chr10 98627437 98627747 -46961541 - AluJo SINE Alu 0 312 1 278 276 10 41 chr10 98627752 98627850 -46961438 - MER117 DNA MER1_type -79 118 24 541 302 21 21 chr10 98627860 98628049 -46961239 + MIR SINE MIR 20 208 -54 655 302 39 17 chr10 98628271 98628503 -46960785 + MIR SINE MIR 14 250 -12 1024 75 29 0 chr10 98629856 98630029 -46959259 + (TCTA)n Simple_repeat Simple_repeat 1 178 0 2859 102 3 0 chr10 98630047 98630401 -46958887 - THE1A LTR MaLR 0 355 1 743 66 52 0 chr10 98630401 98630537 -46958751 + (TCTA)n Simple_repeat Simple_repeat 1 143 0 1401 207 10 39 chr10 98631052 98631357 -46957931 - AluJo SINE Alu -16 296 1 335 322 89 0 chr10 98631983 98632241 -46957047 - L1M4 LINE L1 -3660 2486 2206 3234 141 31 2 chr10 98632321 98632840 -46956448 - L1MB3 LINE L1 -29 6154 5621 2227 116 3 0 chr10 98632866 98633176 -46956112 - AluY SINE Alu 0 311 1 189 107 0 0 chr10 98633575 98633603 -46955685 + (CA)n Simple_repeat Simple_repeat 2 29 0 183 271 85 17 chr10 98633605 98633664 -46955624 + MIR SINE MIR 80 142 -120 308 202 7 7 chr10 98635035 98635180 -46954108 + GA-rich Low_complexity Low_complexity 1 145 0 414 288 27 0 chr10 98635911 98636022 -46953266 - L2 LINE L2 -9 3304 3191 1246 234 122 53 chr10 98636043 98636651 -46952637 - L1MC4 LINE L1 -1 8041 7392 192 309 32 32 chr10 98636705 98636799 -46952489 + MIR3 SINE MIR 108 201 -7 299 382 66 0 chr10 98638240 98638376 -46950912 - MIR3 SINE MIR -34 174 30 304 263 25 62 chr10 98638444 98638594 -46950694 + L2 LINE L2 3160 3307 -6 2078 133 0 0 chr10 98638594 98638928 -46950360 + AluSx SINE Alu 1 334 0 639 263 11 17 chr10 98639097 98639276 -46950012 - MER5B DNA MER1_type 0 178 1 269 154 19 19 chr10 98639542 98639594 -46949694 - L2 LINE L2 -15 3298 3247 25 0 0 0 chr10 98639748 98639773 -46949515 + AT_rich Low_complexity Low_complexity 1 25 0 840 161 0 0 chr10 98639775 98639893 -46949395 - FLAM_C SINE Alu -15 118 1 296 353 7 7 chr10 98640681 98640831 -46948457 + L1MC4a LINE L1 5732 5881 -1927 344 293 73 7 chr10 98642030 98642180 -46947108 + MIR3 SINE MIR 36 195 -13 700 157 0 0 chr10 98642348 98642450 -46946838 + U6 snRNA snRNA 2 103 -4 23 0 0 0 chr10 98642450 98642473 -46946815 + AT_rich Low_complexity Low_complexity 1 23 0 430 222 69 49 chr10 98642987 98643149 -46946139 + MER5B DNA MER1_type 8 184 -5 814 173 8 0 chr10 98643221 98643348 -46945940 - FLAM_C SINE Alu -15 128 1 1188 260 39 14 chr10 98643684 98644042 -46945246 + MLT1J LTR MaLR 40 406 -105 481 184 144 115 chr10 98644269 98644336 -46944952 + MER5A DNA MER1_type 9 73 -116 781 181 9 0 chr10 98644336 98644452 -46944836 + FLAM_C SINE Alu 1 117 -16 481 184 144 115 chr10 98644452 98644558 -46944730 + MER5A DNA MER1_type 73 187 -2 660 262 23 41 chr10 98645265 98645486 -46943802 + MIR SINE MIR 31 247 -15 204 40 0 0 chr10 98645502 98645527 -46943761 + (TA)n Simple_repeat Simple_repeat 1 25 0 1451 155 69 0 chr10 98645908 98646140 -46943148 + AluSq SINE Alu 18 265 -48 383 324 49 7 chr10 98646195 98646337 -46942951 - MIR SINE MIR -112 150 3 209 306 0 0 chr10 98646363 98646412 -46942876 - L2 LINE L2 -229 3043 2995 7538 32 2 0 chr10 98646412 98647291 -46941997 - L1PA4 LINE L1 -1 6154 5274 2119 234 105 18 chr10 98647515 98648123 -46941165 + MLT2F LTR ERVL 1 661 -2 230 253 0 55 chr10 98648129 98648220 -46941068 - LTR67 LTR ERVL -15 542 457 226 284 95 38 chr10 98648258 98648469 -46940819 + L2 LINE L2 1685 1907 -1407 905 232 93 30 chr10 98648592 98648924 -46940364 + LTR16A LTR ERVL 97 449 -1 702 340 110 17 chr10 98648924 98649407 -46939881 + L2 LINE L2 1989 2516 -798 237 265 12 84 chr10 98649916 98649999 -46939289 - L2 LINE L2 -10 3262 3186 465 232 226 6 chr10 98650307 98650484 -46938804 - MIR SINE MIR 0 262 47 510 224 155 0 chr10 98651043 98651159 -46938129 - MER63 DNA MER1_type -76 760 1 2254 99 7 0 chr10 98651359 98651653 -46937635 - AluSx SINE Alu -2 310 15 2282 62 0 10 chr10 98651680 98651971 -46937317 - AluY SINE Alu 0 311 24 2626 210 114 85 chr10 98651999 98652814 -46936474 - MER97b DNA MER1_type? -7 1046 194 1586 166 6 54 chr10 98652814 98653127 -46936161 + AluJo SINE Alu 1 298 -14 2626 210 114 85 chr10 98653127 98653327 -46935961 - MER97b DNA MER1_type? -859 194 1 347 225 33 67 chr10 98653327 98653447 -46935841 + MER5B DNA MER1_type 63 178 0 890 220 181 46 chr10 98653808 98654330 -46934958 + L2 LINE L2 2626 3227 -86 1066 178 0 0 chr10 98654342 98654516 -46934772 - AluJb SINE Alu -10 302 129 284 284 14 0 chr10 98654518 98654592 -46934696 + L2 LINE L2 3239 3313 0 212 59 29 0 chr10 98654620 98654654 -46934634 + (TAA)n Simple_repeat Simple_repeat 2 36 0 473 279 125 14 chr10 98654702 98654910 -46934378 - HAL1 LINE L1 -113 2394 2164 315 242 10 61 chr10 98654961 98655060 -46934228 - HAL1b LINE L1 -441 907 814 559 297 35 103 chr10 98656336 98656791 -46932497 - L2 LINE L2 0 3313 2890 551 167 61 18 chr10 98657658 98657772 -46931516 - MER3 DNA MER1_type 0 209 91 180 0 0 0 chr10 98658427 98658447 -46930841 + (A)n Simple_repeat Simple_repeat 1 20 0 906 213 11 0 chr10 98658642 98658816 -46930472 - MER5B DNA MER1_type 0 178 3 288 77 0 0 chr10 98658821 98658860 -46930428 + (A)n Simple_repeat Simple_repeat 1 39 0 404 333 82 31 chr10 98659374 98659569 -46929719 - L2 LINE L2 -5 3267 3063 312 347 41 0 chr10 98659647 98659768 -46929520 + LTR16A LTR ERVL 2 127 -323 322 219 15 88 chr10 98659834 98659971 -46929317 - L2 LINE L2 -448 2866 2740 5465 110 4 8 chr10 98660147 98661502 -46927786 + L1PA7 LINE L1 4638 5985 -169 16172 117 16 8 chr10 98661602 98664070 -46925218 - L1P LINE L1 -1555 4591 2104 790 236 97 110 chr10 98664533 98664713 -46924575 + MLT1K LTR MaLR 112 293 -295 2018 143 0 10 chr10 98664713 98665014 -46924274 - AluSx SINE Alu -14 298 1 790 236 97 110 chr10 98665014 98665316 -46923972 + MLT1K LTR MaLR 293 588 0 2279 145 89 56 chr10 98665842 98666019 -46923269 + MSTA LTR MaLR 1 171 -257 2313 51 51 0 chr10 98666019 98666315 -46922973 + AluY SINE Alu 1 311 0 2279 145 89 56 chr10 98666315 98666551 -46922737 + MSTA LTR MaLR 171 428 0 2401 40 6 77 chr10 98666744 98667071 -46922217 + AluY SINE Alu 1 304 -7 338 346 62 11 chr10 98667289 98667468 -46921820 - Tigger8 DNA MER2_type -6 660 473 2310 216 48 47 chr10 98667498 98668265 -46921023 - Charlie2 DNA MER1_type -234 2628 1861 600 260 178 19 chr10 98668275 98668544 -46920744 - Charlie2 DNA MER1_type -2547 315 4 1056 318 65 27 chr10 98668544 98669238 -46920050 - L2 LINE L2 -114 3199 2472 1560 208 36 34 chr10 98669568 98670016 -46919272 + MER69 DNA AcHobo 2078 2526 0 1202 280 84 69 chr10 98670080 98670490 -46918798 - L2 LINE L2 -924 2390 1988 1907 171 128 26 chr10 98670490 98670905 -46918383 - MSTB2 LTR MaLR 0 457 1 1202 280 84 69 chr10 98670905 98671041 -46918247 - L2 LINE L2 -1326 1988 1856 2285 119 3 0 chr10 98671041 98671352 -46917936 + AluSx SINE Alu 1 312 0 1202 280 84 69 chr10 98671352 98671600 -46917688 - L2 LINE L2 -1458 1856 1583 617 124 21 10 chr10 98673690 98673787 -46915501 + MER4A LTR ERV1 1 98 -566 1940 120 182 31 chr10 98673787 98674138 -46915150 + MER4A LTR ERV1 261 664 0 672 111 60 34 chr10 98674699 98674816 -46914472 + L1MB3 LINE L1 6058 6177 -6 591 280 91 18 chr10 98675050 98675336 -46913952 - L1MC4a LINE L1 -1878 5930 5624 24 0 0 0 chr10 98675630 98675654 -46913634 + AT_rich Low_complexity Low_complexity 1 24 0 389 246 33 60 chr10 98675739 98675901 -46913387 - MIR3 SINE MIR -73 135 3 7866 118 35 23 chr10 98676253 98676974 -46912314 + Tigger3b DNA MER2_type 2 746 -2282 2333 99 0 0 chr10 98676974 98677268 -46912020 + AluSg SINE Alu 1 294 -16 7866 118 35 23 chr10 98677268 98677760 -46911528 + Tigger3b DNA MER2_type 746 1230 -1 385 228 25 0 chr10 98678007 98678086 -46911202 - MLT1J2 LTR MaLR -24 426 346 321 216 137 22 chr10 98678186 98678325 -46910963 - MLT1J2 LTR MaLR -291 159 5 219 36 0 0 chr10 98679209 98679237 -46910051 + (TG)n Simple_repeat Simple_repeat 1 28 0 396 311 49 44 chr10 98681247 98681430 -46907858 - MIR3 SINE MIR -7 201 18 990 309 40 21 chr10 98682095 98682522 -46906766 + LTR16A LTR ERVL 16 450 0 2474 169 36 36 chr10 98682667 98683170 -46906118 - MLT1D LTR MaLR 0 505 3 216 67 0 0 chr10 98683793 98683823 -46905465 + (GA)n Simple_repeat Simple_repeat 1 30 0 1765 157 29 0 chr10 98683823 98684097 -46905191 - AluJb SINE Alu -30 282 1 244 250 44 15 chr10 98684126 98684194 -46905094 + L2 LINE L2 3096 3165 -107 23 54 0 0 chr10 98684697 98684734 -46904554 + AT_rich Low_complexity Low_complexity 1 37 0 697 284 127 41 chr10 98685016 98685558 -46903730 - L1ME3A LINE L1 -222 6017 5429 1654 283 107 64 chr10 98685605 98686013 -46903275 - L1ME3A LINE L1 -840 5375 4986 2326 96 0 3 chr10 98686013 98686316 -46902972 - AluSq SINE Alu -11 302 1 1654 283 107 64 chr10 98686316 98686962 -46902326 - L1ME3A LINE L1 -1229 4986 4370 2014 22 22 0 chr10 98686962 98687191 -46902097 + L1PA2 LINE L1 5921 6154 -1 1654 283 107 64 chr10 98687191 98687212 -46902076 - L1ME3A LINE L1 -1845 4370 4351 2183 90 4 0 chr10 98687212 98687491 -46901797 + AluSq SINE Alu 12 291 -22 1654 283 107 64 chr10 98687491 98687530 -46901758 - L1ME3A LINE L1 -1864 4351 4315 261 0 0 0 chr10 98687530 98687559 -46901729 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1654 283 107 64 chr10 98687559 98689169 -46900119 - L1ME3A LINE L1 -1900 4315 2529 976 162 0 0 chr10 98689341 98689537 -46899751 - FRAM SINE Alu 0 195 1 544 268 42 11 chr10 98690073 98690279 -46899009 - L1ME3A LINE L1 -855 1721 1505 1520 204 87 73 chr10 98690280 98690962 -46898326 - Charlie7 DNA MER1_type 0 2612 1922 5297 97 36 0 chr10 98690981 98691722 -46897566 + L1PB1 LINE L1 5381 6148 -3 335 291 39 10 chr10 98691850 98691953 -46897335 + MIR3 SINE MIR 82 187 -21 361 342 25 0 chr10 98692023 98692181 -46897107 + L1MC4a LINE L1 5764 5925 -1883 2144 130 0 0 chr10 98692366 98692658 -46896630 + AluSx SINE Alu 1 292 -20 317 146 11 34 chr10 98692694 98692783 -46896505 + (TA)n Simple_repeat Simple_repeat 2 88 0 1902 197 0 78 chr10 98692912 98693333 -46895955 - MLT1B LTR MaLR 0 390 3 197 300 83 8 chr10 98693606 98693726 -46895562 + L3 LINE CR1 1314 1442 -135 22 56 0 0 chr10 98694850 98694886 -46894402 + AT_rich Low_complexity Low_complexity 1 36 0 286 128 0 0 chr10 98694902 98694941 -46894347 - U6 snRNA snRNA 0 107 69 657 286 55 5 chr10 98695176 98695375 -46893913 + MIR SINE MIR 4 212 -50 977 290 109 19 chr10 98696088 98696464 -46892824 + LTR16A LTR ERVL 25 434 -16 252 0 0 0 chr10 98697143 98697171 -46892117 + (CA)n Simple_repeat Simple_repeat 2 29 0 305 280 87 65 chr10 98697334 98697549 -46891739 - L2 LINE L2 -167 3105 2881 1655 223 25 33 chr10 98697549 98697948 -46891340 + MSTD LTR MaLR 1 396 0 305 280 87 65 chr10 98697948 98698007 -46891281 - L2 LINE L2 -391 2881 2825 495 229 55 9 chr10 98698315 98698424 -46890864 - MER81 DNA DNA 0 114 1 2861 104 3 3 chr10 98698669 98699033 -46890255 - THE1B LTR MaLR 0 364 1 11184 102 33 35 chr10 98699033 98700616 -46888672 - THE1B-int LTR MaLR 0 1580 2 2905 83 11 6 chr10 98700617 98700979 -46888309 - THE1B LTR MaLR 0 364 1 689 264 95 78 chr10 98701234 98701696 -46887592 + MLT1J LTR MaLR 4 473 -38 429 209 33 0 chr10 98702940 98703031 -46886257 + MER53 DNA DNA 96 189 0 1758 167 33 3 chr10 98704028 98704357 -46884931 - AluJo SINE Alu 0 340 3 364 371 62 58 chr10 98705052 98705279 -46884009 + L2 LINE L2 2818 3049 -223 755 207 20 66 chr10 98705279 98705477 -46883811 - MER5A DNA MER1_type 0 189 1 364 371 62 58 chr10 98705477 98705683 -46883605 + L2 LINE L2 3049 3253 -19 404 254 75 22 chr10 98706063 98706197 -46883091 + MIR SINE MIR 21 161 -101 723 276 50 50 chr10 98706205 98706352 -46882936 + MIR SINE MIR 2 151 -111 380 215 13 0 chr10 98706352 98706431 -46882857 - MER116 DNA Mariner 0 80 1 723 276 50 50 chr10 98706431 98706544 -46882744 + MIR SINE MIR 150 262 0 327 184 40 0 chr10 98706889 98706965 -46882323 - MER116 DNA Mariner 0 80 2 252 144 67 89 chr10 98707033 98707123 -46882165 + HsTC2 DNA Tc2 29 1834 -64 526 189 110 43 chr10 98707194 98707358 -46881930 + LTR33A LTR ERVL 343 517 -6 352 354 82 46 chr10 98707470 98707977 -46881311 - L2 LINE L2 -5 3267 2743 3889 104 41 2 chr10 98708090 98708597 -46880691 - MER1A DNA MER1_type 0 527 1 513 372 111 24 chr10 98708618 98709293 -46879995 - L2 LINE L2 -1 3271 2537 1776 149 0 4 chr10 98709786 98710068 -46879220 + AluJb SINE Alu 25 305 0 2114 132 10 0 chr10 98710078 98710382 -46878906 + AluSx SINE Alu 1 307 -5 750 178 8 8 chr10 98710402 98710520 -46878768 + FLAM_C SINE Alu 1 118 -15 899 208 69 20 chr10 98710551 98710796 -46878492 - Charlie8 DNA MER1_type -2160 257 1 1059 299 61 39 chr10 98711177 98711818 -46877470 + L1MC4a LINE L1 5267 5921 -1887 231 196 84 0 chr10 98711959 98712066 -46877222 + (TA)n Simple_repeat Simple_repeat 2 117 0 1898 121 0 0 chr10 98712077 98712334 -46876954 - AluSx SINE Alu -17 295 39 225 267 0 67 chr10 98713052 98713142 -46876146 - L2 LINE L2 0 3272 3189 356 247 12 0 chr10 98713282 98713363 -46875925 + MER103 DNA DNA 66 147 -19 391 268 242 16 chr10 98714561 98714871 -46874417 + L1ME3A LINE L1 5506 5885 -285 21 57 0 0 chr10 98715191 98715226 -46874062 + AT_rich Low_complexity Low_complexity 1 35 0 332 232 0 0 chr10 98715252 98715321 -46873967 - L1ME2 LINE L1 -93 6071 6003 2233 107 0 0 chr10 98715342 98715631 -46873657 + AluSx SINE Alu 15 303 -9 607 320 102 47 chr10 98715828 98716387 -46872901 - L2 LINE L2 -1002 2312 1723 506 182 193 34 chr10 98716628 98716780 -46872508 + MER5A DNA MER1_type 4 183 -6 244 308 23 81 chr10 98717356 98717528 -46871760 - MER5A DNA MER1_type -24 165 4 188 350 94 5 chr10 98717796 98717999 -46871289 + L2 LINE L2 1773 1993 -1321 786 238 17 33 chr10 98718245 98718426 -46870862 - MER45A DNA AcHobo 0 178 1 195 275 132 0 chr10 98719817 98719908 -46869380 + L2 LINE L2 2560 2662 -652 11321 74 8 1 chr10 98720268 98721870 -46867418 + L1P3 LINE L1 3875 5489 -665 4887 36 0 0 chr10 98721869 98722474 -46866814 + L1PA4 LINE L1 2793 3397 -2749 * 17693 38 7 1 chr10 98722474 98725275 -46864013 + L1PA4 LINE L1 3353 6154 -1 209 306 0 0 chr10 98725275 98725324 -46863964 + L2 LINE L2 2995 3043 -229 383 324 49 7 chr10 98725350 98725492 -46863796 + MIR SINE MIR 3 150 -112 1451 155 69 0 chr10 98725547 98725779 -46863509 - AluSq SINE Alu -48 265 18 204 40 0 0 chr10 98726161 98726186 -46863102 + (TA)n Simple_repeat Simple_repeat 1 25 0 734 262 18 36 chr10 98726202 98726423 -46862865 - MIR SINE MIR -15 247 31 481 184 144 115 chr10 98727130 98727236 -46862052 - MER5A DNA MER1_type -2 187 73 781 181 9 0 chr10 98727236 98727352 -46861936 - FLAM_C SINE Alu -16 117 1 481 184 144 115 chr10 98727352 98727419 -46861869 - MER5A DNA MER1_type -116 73 9 1289 253 35 16 chr10 98727646 98728018 -46861270 - MLT1J LTR MaLR -105 406 28 222 277 0 0 chr10 98728647 98728694 -46860594 - L2 LINE L2 -16 3256 3210 2706 162 42 26 chr10 98729689 98730183 -46859105 + L1MC1 LINE L1 5819 6320 -13 350 172 138 121 chr10 98732058 98732232 -46857056 + MLT1K LTR MaLR 394 570 -18 1709 172 0 24 chr10 98732911 98733240 -46856048 + AluJo SINE Alu 1 322 0 483 287 72 74 chr10 98733301 98733705 -46855583 + LTR67 LTR ERVL 105 507 -50 273 180 30 150 chr10 98734124 98734224 -46855064 + MER94 DNA DNA 5 92 -42 387 279 99 25 chr10 98737194 98737355 -46851933 + MIR3 SINE MIR 31 203 -5 * 532 306 74 56 chr10 98737329 98737653 -46851635 + L2 LINE L2 2512 2841 -473 426 292 0 15 chr10 98738487 98738617 -46850671 + MIR SINE MIR 8 135 -127 1986 148 0 10 chr10 98738966 98739271 -46850017 - AluJb SINE Alu -10 302 1 1972 151 0 0 chr10 98739447 98739754 -46849534 + AluSx SINE Alu 1 307 0 1171 193 79 25 chr10 98740188 98740484 -46848804 - MLT1G3 LTR MaLR 0 555 228 426 200 8 44 chr10 98740479 98740599 -46848689 - MLT1G3 LTR MaLR -456 99 1 * 2633 204 65 21 chr10 98740909 98741444 -46847844 - MLT1F1 LTR MaLR -8 559 1 1543 214 62 6 chr10 98743365 98743688 -46845600 - MER58B DNA MER1_type 0 341 1 432 274 32 32 chr10 98743957 98744081 -46845207 + L2 LINE L2 3147 3270 -2 2300 98 0 9 chr10 98744111 98744426 -46844862 - AluSx SINE Alu 0 312 1 361 341 131 5 chr10 98745896 98746110 -46843178 + MIR3 SINE MIR 8 246 -16 508 213 251 6 chr10 98746162 98746345 -46842943 - MIR SINE MIR -16 246 19 294 267 95 26 chr10 98746531 98746647 -46842641 - MIR SINE MIR -23 239 116 26 0 0 0 chr10 98750637 98750663 -46838625 + AT_rich Low_complexity Low_complexity 1 26 0 2892 7 0 0 chr10 98750978 98751288 -46838000 - AluYb8 SINE Alu -8 310 1 288 338 47 2 chr10 98752516 98752659 -46836629 + MIR SINE MIR 9 155 -66 405 311 66 25 chr10 98754399 98754595 -46834693 + MIR SINE MIR 52 255 -7 227 203 162 14 chr10 98754671 98754745 -46834543 + L1ME LINE L1 5718 5802 -319 22 70 0 0 chr10 98755280 98755323 -46833965 + AT_rich Low_complexity Low_complexity 1 43 0 378 306 50 19 chr10 98755341 98755501 -46833787 - L1ME4a LINE L1 -26 6095 5931 465 244 17 64 chr10 98756787 98756959 -46832329 + L2 LINE L2 2703 2866 -448 312 347 41 0 chr10 98757025 98757146 -46832142 - LTR16A LTR ERVL -323 127 2 404 333 82 31 chr10 98757224 98757419 -46831869 + L2 LINE L2 3063 3267 -5 288 77 0 0 chr10 98757933 98757972 -46831316 + (T)n Simple_repeat Simple_repeat 1 39 0 906 213 11 0 chr10 98757977 98758151 -46831137 + MER5B DNA MER1_type 3 178 0 180 0 0 0 chr10 98758346 98758366 -46830922 + (T)n Simple_repeat Simple_repeat 1 20 0 551 167 61 18 chr10 98759021 98759135 -46830153 + MER3 DNA MER1_type 91 209 0 559 297 35 103 chr10 98760002 98760457 -46828831 + L2 LINE L2 2890 3313 0 315 242 10 61 chr10 98761732 98761831 -46827457 + HAL1b LINE L1 814 907 -441 473 279 125 14 chr10 98761882 98762090 -46827198 + HAL1 LINE L1 2164 2394 -113 212 59 29 0 chr10 98762138 98762172 -46827116 + (TTA)n Simple_repeat Simple_repeat 2 36 0 284 284 14 0 chr10 98762200 98762274 -46827014 - L2 LINE L2 0 3313 3239 1066 178 0 0 chr10 98762276 98762450 -46826838 + AluJb SINE Alu 129 302 -10 890 220 181 46 chr10 98762462 98762984 -46826304 - L2 LINE L2 -86 3227 2626 347 225 33 67 chr10 98763344 98763464 -46825824 - MER5B DNA MER1_type 0 178 63 2605 208 114 86 chr10 98763464 98763665 -46825623 + MER97b DNA MER1_type? 1 195 -858 1586 166 6 54 chr10 98763665 98763978 -46825310 - AluJo SINE Alu -14 298 1 2605 208 114 86 chr10 98763978 98764793 -46824495 + MER97b DNA MER1_type? 195 1046 -7 2282 62 0 10 chr10 98764821 98765112 -46824176 + AluY SINE Alu 24 311 0 2254 99 7 0 chr10 98765139 98765433 -46823855 + AluSx SINE Alu 15 310 -2 510 224 155 0 chr10 98765633 98765749 -46823539 + MER63 DNA MER1_type 1 760 -76 465 232 226 6 chr10 98766307 98766484 -46822804 + MIR SINE MIR 47 262 0 264 268 12 73 chr10 98766792 98766874 -46822414 + L2 LINE L2 3186 3262 -10 702 340 110 17 chr10 98767383 98767866 -46821422 - L2 LINE L2 -798 2516 1989 905 232 93 30 chr10 98767866 98768198 -46821090 - LTR16A LTR ERVL -1 449 97 226 284 95 38 chr10 98768322 98768533 -46820755 - L2 LINE L2 -1407 1907 1685 230 253 0 55 chr10 98768571 98768662 -46820626 + LTR67 LTR ERVL 457 542 -15 2119 234 105 18 chr10 98768668 98769276 -46820012 - MLT2F LTR ERVL -2 661 1 7988 25 0 0 chr10 98769500 98770379 -46818909 + L1PA4 LINE L1 5274 6152 -3 333 320 48 20 chr10 98771755 98771902 -46817386 - MIR3 SINE MIR -25 183 33 207 198 12 35 chr10 98772218 98772304 -46816984 + CT-rich Low_complexity Low_complexity 1 84 0 180 273 0 0 chr10 98772609 98772675 -46816613 + CT-rich Low_complexity Low_complexity 4 69 0 6853 229 82 28 chr10 98773844 98775852 -46813436 + L1MEc LINE L1 37 2152 -4244 237 313 50 40 chr10 98776160 98776358 -46812930 + L2 LINE L2 1332 1531 -1783 2206 102 26 3 chr10 98776500 98776804 -46812484 - AluSq SINE Alu -2 311 1 355 219 114 19 chr10 98777025 98777130 -46812158 - MIR SINE MIR -111 151 37 204 163 0 0 chr10 98777496 98777539 -46811749 + (TATG)n Simple_repeat Simple_repeat 2 44 0 354 226 32 40 chr10 98777582 98777706 -46811582 + L1M4 LINE L1 4696 4818 -1328 2687 116 11 24 chr10 98777824 98778204 -46811084 + THE1C LTR MaLR 1 375 0 449 295 103 33 chr10 98778281 98778824 -46810464 + L1M4 LINE L1 4466 5046 -1100 2113 116 0 3 chr10 98779011 98779319 -46809969 - AluSx SINE Alu 0 307 1 3397 187 42 14 chr10 98779409 98780480 -46808808 - L1PB4 LINE L1 0 6165 5033 1527 165 0 28 chr10 98780534 98780789 -46808499 - AluJo SINE Alu -59 253 6 2134 194 11 5 chr10 98780794 98781233 -46808055 - L1PB4 LINE L1 -1101 5045 4604 1304 158 0 5 chr10 98781233 98781474 -46807814 - AluSg/x SINE Alu 0 318 79 5537 206 34 11 chr10 98781480 98782763 -46806525 - L1PB4 LINE L1 -2184 3962 2650 476 256 0 62 chr10 98784433 98784576 -46804712 + MIR SINE MIR 113 247 -15 2855 143 5 23 chr10 98784576 98785010 -46804278 + MSTB LTR MaLR 1 426 0 476 256 0 62 chr10 98785010 98785026 -46804262 + MIR SINE MIR 247 262 0 429 248 184 7 chr10 98785040 98785181 -46804107 + MIR SINE MIR 49 214 -48 276 330 19 19 chr10 98786297 98786403 -46802885 + MIR SINE MIR 8 113 -149 377 305 0 0 chr10 98786466 98786561 -46802727 - MIR SINE MIR -51 211 117 2073 109 4 0 chr10 98786859 98787134 -46802154 - AluSg SINE Alu -12 298 23 189 195 0 0 chr10 98787204 98787245 -46802043 + (CA)n Simple_repeat Simple_repeat 2 42 0 2712 139 44 2 chr10 98787639 98788048 -46801240 - MSTA LTR MaLR -2 426 1 9718 172 38 4 chr10 98788048 98789644 -46799644 - MSTA-int LTR MaLR 0 1651 2 2534 150 46 12 chr10 98789646 98790059 -46799229 - MSTA LTR MaLR -1 427 1 393 307 92 74 chr10 98790182 98790465 -46798823 - L2 LINE L2 0 3272 2985 443 240 240 7 chr10 98790475 98790621 -46798667 + MER5A DNA MER1_type 10 189 0 184 383 0 11 chr10 98790634 98790728 -46798560 - L2 LINE L2 -290 2982 2890 2754 113 8 5 chr10 98791563 98791935 -46797353 - THE1C LTR MaLR 0 375 3 10007 101 35 71 chr10 98791937 98793577 -46795711 - THE1C-int LTR MaLR 0 1580 1 2853 112 5 5 chr10 98793577 98793952 -46795336 - THE1C LTR MaLR 0 375 1 424 256 83 0 chr10 98794109 98794230 -46795058 - L2 LINE L2 -25 3288 3158 260 318 16 39 chr10 98794270 98794399 -46794889 + LTR16B LTR ERVL 34 159 -305 721 124 44 29 chr10 98794437 98794574 -46794714 + MER53 DNA DNA 1 139 -50 1401 143 42 38 chr10 98794574 98794839 -46794449 + AluJb SINE Alu 1 266 -46 538 316 73 9 chr10 98794839 98795057 -46794231 + HERV16 LTR ERVL 2 233 -4763 3373 282 104 36 chr10 98795364 98797196 -46792092 + HERV16 LTR ERVL 599 2609 -2387 242 143 0 102 chr10 98797553 98797602 -46791686 + LTR16A LTR ERVL 1 44 -406 1329 203 123 69 chr10 98797815 98798279 -46791009 + MLT1D LTR MaLR 7 495 -10 225 313 22 67 chr10 98798442 98798576 -46790712 - L2 LINE L2 -168 3104 2977 397 298 112 44 chr10 98799369 98799779 -46789509 + Charlie8 DNA MER1_type 1 438 -1979 251 77 51 0 chr10 98801032 98801071 -46788217 - MER97b DNA MER1_type? -874 179 139 6225 80 43 11 chr10 98801113 98802884 -46786404 - L1PA11 LINE L1 0 6174 4346 475 293 63 6 chr10 98803101 98803275 -46786013 - MIR SINE MIR -70 192 9 6657 21 6 0 chr10 98803559 98804281 -46785007 - L1PA3 LINE L1 -3 6152 5427 307 238 204 48 chr10 98804909 98805115 -46784173 - L1ME4a LINE L1 -5 6116 5879 482 276 184 5 chr10 98805299 98805495 -46783793 - MIR SINE MIR -24 238 8 2272 119 0 0 chr10 98805573 98805885 -46783403 - AluSx SINE Alu 0 312 1 389 342 0 0 chr10 98807597 98807717 -46781571 - MIR SINE MIR -115 147 28 1974 192 26 26 chr10 98807857 98808247 -46781041 - MSTD LTR MaLR -6 390 1 213 284 45 0 chr10 98808259 98808326 -46780962 - MER5B DNA MER1_type -105 73 4 1796 117 36 0 chr10 98808660 98808907 -46780381 - AluSx SINE Alu -9 303 48 737 241 6 13 chr10 98809198 98809356 -46779932 + MIR SINE MIR 14 170 -92 180 167 197 0 chr10 98809607 98809673 -46779615 + MIR SINE MIR 180 258 -4 881 195 33 67 chr10 98810272 98810482 -46778806 - MER3 DNA MER1_type -4 205 3 24 53 0 0 chr10 98811294 98811332 -46777956 + AT_rich Low_complexity Low_complexity 1 38 0 400 168 11 21 chr10 98811769 98811864 -46777424 - MER69 DNA AcHobo -26 2500 2407 348 229 0 0 chr10 98812030 98812091 -46777197 - MER69 DNA AcHobo -1165 61 1 305 278 105 19 chr10 98812117 98812279 -46777009 - MIR3 SINE MIR -24 184 9 371 280 206 19 chr10 98812296 98812510 -46776778 + MIR SINE MIR 3 256 -6 192 214 0 0 chr10 98813245 98813287 -46776001 + L2 LINE L2 3270 3311 -2 181 261 0 22 chr10 98813297 98813343 -46775945 - L3 LINE CR1 -1265 312 268 660 280 49 37 chr10 98813364 98813607 -46775681 - MIR SINE MIR -1 261 16 235 200 117 17 chr10 98814049 98814109 -46775179 + MIR SINE MIR 81 146 -116 543 267 108 47 chr10 98814223 98814500 -46774788 + L2 LINE L2 3016 3309 -4 202 322 119 44 chr10 98814528 98814823 -46774465 + L2 LINE L2 2385 2701 -613 856 250 108 56 chr10 98815256 98815544 -46773744 - Charlie2 DNA MER1_type -2559 303 1 722 266 97 26 chr10 98815638 98815864 -46773424 + MIR SINE MIR 21 262 0 208 298 202 0 chr10 98816008 98816102 -46773186 - L2 LINE L2 0 3313 3201 527 281 15 108 chr10 98816332 98816592 -46772696 + L3 LINE CR1 707 942 -635 459 72 29 0 chr10 98816846 98816915 -46772373 - L1PA15 LINE L1 -5 6160 6090 1075 76 0 0 chr10 98816928 98817059 -46772229 - AluSg SINE Alu -179 131 1 32 0 0 0 chr10 98817217 98817249 -46772039 + AT_rich Low_complexity Low_complexity 1 32 0 934 291 118 34 chr10 98818073 98818575 -46770713 + L3 LINE CR1 1029 1572 -5 420 55 0 0 chr10 98818958 98819013 -46770275 + (TG)n Simple_repeat Simple_repeat 2 56 0 25 31 0 0 chr10 98819091 98819123 -46770165 + AT_rich Low_complexity Low_complexity 1 32 0 414 281 89 35 chr10 98819314 98819517 -46769771 + MIR SINE MIR 31 244 -18 611 176 54 3 chr10 98819541 98819753 -46769535 - MER58B DNA MER1_type 0 341 58 493 243 46 40 chr10 98820409 98820561 -46768727 + L1ME4a LINE L1 5555 5707 -414 324 268 16 24 chr10 98820748 98820871 -46768417 + L1ME4a LINE L1 5831 5952 -169 447 246 14 35 chr10 98821226 98821368 -46767920 + L1ME4a LINE L1 5934 6072 -49 456 224 52 15 chr10 98821616 98821750 -46767538 + LTR33 LTR ERVL 1 139 -382 727 266 74 4 chr10 98821792 98822036 -46767252 + LTR33 LTR ERVL 259 519 -2 968 212 115 55 chr10 98822987 98823388 -46765900 - MLT1H LTR MaLR 0 555 92 2579 50 3 0 chr10 98823388 98823686 -46765602 - AluY SINE Alu -12 299 1 968 212 115 55 chr10 98823686 98823782 -46765506 - MLT1H LTR MaLR -463 92 3 28 29 0 0 chr10 98823927 98823962 -46765326 + AT_rich Low_complexity Low_complexity 1 35 0 1435 158 0 45 chr10 98824109 98824356 -46764932 - AluJb SINE Alu -75 237 2 1339 270 94 18 chr10 98824411 98825110 -46764178 - L1ME3A LINE L1 -219 5951 5195 219 195 0 0 chr10 98826150 98826191 -46763097 + MIR SINE MIR 216 256 -6 5282 187 68 39 chr10 98827203 98828369 -46760919 + Charlie1a DNA MER1_type 4 1283 -1478 1676 170 13 29 chr10 98828369 98828675 -46760613 + AluJo SINE Alu 1 301 -11 5282 187 68 39 chr10 98828675 98828853 -46760435 + Charlie1a DNA MER1_type 1283 1454 -1 838 175 96 0 chr10 98831203 98831369 -46757919 + L1MC3 LINE L1 7603 7784 -1 394 247 37 117 chr10 98831376 98831676 -46757612 - L1ME4a LINE L1 -16 6105 5830 629 72 0 0 chr10 98831679 98831762 -46757526 - Alu SINE Alu -4 307 225 1032 147 0 0 chr10 98831762 98831912 -46757376 - AluSq SINE Alu -160 153 4 323 262 68 0 chr10 98831922 98832025 -46757263 - L1ME4a LINE L1 -2005 5803 5694 2508 54 0 0 chr10 98832027 98832325 -46756963 - AluY SINE Alu -13 298 1 286 259 0 0 chr10 98832556 98832614 -46756674 + L2 LINE L2 3194 3251 -21 516 32 0 0 chr10 98832619 98832681 -46756607 + (GGAA)n Simple_repeat Simple_repeat 3 64 0 677 109 0 9 chr10 98832681 98832791 -46756497 + (GGGGA)n Simple_repeat Simple_repeat 3 111 0 852 214 125 96 chr10 98833068 98833483 -46755805 + MLT1H LTR MaLR 123 549 0 246 62 0 0 chr10 98833599 98833631 -46755657 + (CA)n Simple_repeat Simple_repeat 2 33 0 634 149 103 0 chr10 98833670 98833777 -46755511 + AluJb SINE Alu 78 195 -117 876 293 76 19 chr10 98833796 98834281 -46755007 + L1M4 LINE L1 3854 4366 -1780 309 283 141 0 chr10 98834367 98834459 -46754829 + L2 LINE L2 3199 3303 -10 688 153 27 0 chr10 98834472 98834583 -46754705 + MER81 DNA DNA 1 114 0 1703 192 5 69 chr10 98835191 98835503 -46753785 + MLT1A1 LTR MaLR 1 285 -80 808 189 0 0 chr10 98835503 98835625 -46753663 - FLAM_C SINE Alu -11 122 1 1703 192 5 69 chr10 98835625 98835702 -46753586 + MLT1A1 LTR MaLR 285 365 0 4629 177 50 24 chr10 98835780 98836620 -46752668 + MER21B LTR ERV1 1 862 -1 475 295 87 0 chr10 98837011 98837184 -46752104 - MIR SINE MIR -70 192 5 2148 111 4 0 chr10 98837637 98837951 -46751337 + AluSx SINE Alu 1 315 0 2029 107 3 28 chr10 98837956 98838285 -46751003 + AluSx SINE Alu 1 322 0 32 75 0 0 chr10 98838369 98838436 -46750852 + AT_rich Low_complexity Low_complexity 1 67 0 801 294 117 35 chr10 98838481 98838909 -46750379 - L2 LINE L2 -470 2844 2382 531 235 26 0 chr10 98839046 98839161 -46750127 + MLT1E LTR MaLR 1 118 -475 * 1637 208 63 11 chr10 98839158 98839509 -46749779 + MLT1E LTR MaLR 225 593 0 21 36 0 0 chr10 98839608 98839636 -46749652 + AT_rich Low_complexity Low_complexity 1 28 0 243 288 137 0 chr10 98839723 98839796 -46749492 - MIR SINE MIR -76 132 50 382 373 149 13 chr10 98840659 98840887 -46748401 - L2 LINE L2 -15 3257 2999 4787 159 23 32 chr10 98840946 98842343 -46746945 + L1MB8 LINE L1 4726 6113 -65 1669 155 26 55 chr10 98842343 98842652 -46746636 - AluJo SINE Alu -12 300 1 4787 159 23 32 chr10 98842652 98842718 -46746570 + L1MB8 LINE L1 6113 6178 0 1247 266 109 36 chr10 98842741 98842829 -46746459 + MLT1H LTR MaLR 9 89 -460 2415 111 111 16 chr10 98842829 98843029 -46746259 - MSTA LTR MaLR -4 424 245 207 0 0 0 chr10 98843029 98843052 -46746236 + (GA)n Simple_repeat Simple_repeat 1 23 0 2415 111 111 16 chr10 98843052 98843238 -46746050 - MSTA LTR MaLR -183 245 1 1247 266 109 36 chr10 98843238 98843653 -46745635 + MLT1H LTR MaLR 89 549 0 2226 97 3 3 chr10 98843930 98844220 -46745068 - AluSc SINE Alu -19 290 1 1496 229 52 25 chr10 98844260 98844666 -46744622 + L1MC4a LINE L1 7386 7802 -6 1101 292 106 27 chr10 98844735 98845632 -46743656 - L2 LINE L2 -9 3304 2330 546 298 7 13 chr10 98846153 98846304 -46742984 + MIR SINE MIR 5 154 -108 1867 241 10 3 chr10 98846357 98846743 -46742545 + LTR16A LTR ERVL 62 450 0 343 287 46 0 chr10 98846743 98846851 -46742437 + MIR SINE MIR 150 262 0 196 282 28 14 chr10 98849618 98849689 -46739599 + MIR SINE MIR 49 120 -142 294 267 0 0 chr10 98849814 98849904 -46739384 - L1MC4 LINE L1 -1339 6703 6614 261 0 0 0 chr10 98849910 98849939 -46739349 + (GA)n Simple_repeat Simple_repeat 2 30 0 570 214 104 55 chr10 98849986 98850187 -46739101 + MIR SINE MIR 51 261 -1 391 266 0 84 chr10 98850495 98850649 -46738639 - MER103 DNA DNA -2 164 24 199 267 44 67 chr10 98850989 98851079 -46738209 - L2 LINE L2 -16 3256 3169 284 329 36 12 chr10 98851254 98851421 -46737867 + MIR3 SINE MIR 36 206 -2 699 272 104 0 chr10 98852302 98852504 -46736784 + MIR SINE MIR 37 259 -3 452 214 36 50 chr10 98852518 98852658 -46736630 - MIR SINE MIR -49 213 76 220 298 29 39 chr10 98853127 98853231 -46736057 + MIR3 SINE MIR 81 183 -25 192 383 67 8 chr10 98853815 98853935 -46735353 - L2 LINE L2 -2 3270 3144 196 342 41 8 chr10 98854500 98854602 -46734686 + MIR SINE MIR 17 120 -105 182 222 0 0 chr10 98854599 98854635 -46734653 - MIR SINE MIR -8 254 219 * 1707 179 17 34 chr10 98854656 98855007 -46734281 + MLT1A1 LTR MaLR 10 354 -11 523 293 89 11 chr10 98855015 98855206 -46734082 - MIR SINE MIR -51 211 6 274 341 23 0 chr10 98855222 98855310 -46733978 + MIR3 SINE MIR 113 202 -6 237 316 26 17 chr10 98855450 98855567 -46733721 + L2 LINE L2 2939 3056 -216 526 261 124 4 chr10 98856353 98856627 -46732661 + LTR33A LTR ERVL 119 463 -60 206 32 32 0 chr10 98857632 98857663 -46731625 + (GGGTG)n Simple_repeat Simple_repeat 3 34 0 233 259 30 15 chr10 98858172 98858307 -46730981 + (CCCCG)n Simple_repeat Simple_repeat 1 137 0 21 0 0 0 chr10 98858356 98858377 -46730911 + GC_rich Low_complexity Low_complexity 1 21 0 343 304 116 60 chr10 98858378 98858714 -46730574 - L1M2 LINE L1 -5644 1205 851 23 33 0 0 chr10 98858868 98858898 -46730390 + GC_rich Low_complexity Low_complexity 1 30 0 840 250 75 36 chr10 98860028 98860336 -46728952 + L2 LINE L2 2994 3313 0 555 106 106 43 chr10 98860804 98860898 -46728390 - AluJb SINE Alu -20 292 193 22 0 0 0 chr10 98861010 98861032 -46728256 + AT_rich Low_complexity Low_complexity 1 22 0 309 255 161 74 chr10 98861322 98861471 -46727817 - MIR3 SINE MIR -13 195 34 266 278 157 0 chr10 98861553 98861661 -46727627 + L2 LINE L2 3139 3263 -9 491 305 110 25 chr10 98861961 98862197 -46727091 + MIR SINE MIR 6 261 -1 250 254 18 114 chr10 98862214 98862328 -46726960 + MIR3 SINE MIR 83 185 -23 207 250 18 0 chr10 98863308 98863364 -46725924 + L2 LINE L2 3256 3312 -1 2327 109 0 3 chr10 98863948 98864259 -46725029 + AluSg SINE Alu 1 310 0 4967 166 44 12 chr10 98864583 98866499 -46722789 + L1MC1 LINE L1 4143 6111 -222 336 261 45 97 chr10 98867265 98867441 -46721847 - MIR3 SINE MIR -23 185 19 1972 145 21 0 chr10 98867443 98867733 -46721555 + AluSx SINE Alu 1 296 -16 204 238 152 67 chr10 98868285 98868390 -46720898 + MIR SINE MIR 57 170 -92 384 214 34 17 chr10 98868704 98868821 -46720467 - L1ME3A LINE L1 -8 6162 6044 434 264 125 68 chr10 98869689 98869969 -46719319 - L2 LINE L2 -97 3216 2921 350 318 31 31 chr10 98870460 98870652 -46718636 + LTR16C LTR ERVL 300 491 0 525 135 33 7 chr10 98870685 98870909 -46718379 + AluJ SINE Alu 1 278 -34 207 0 0 0 chr10 98870911 98870934 -46718354 + (TC)n Simple_repeat Simple_repeat 2 24 0 285 146 0 0 chr10 98870934 98870982 -46718306 + (TA)n Simple_repeat Simple_repeat 2 49 0 1163 228 162 20 chr10 98871194 98871645 -46717643 + L2 LINE L2 1210 1724 -1590 2295 246 105 51 chr10 98871647 98871787 -46717501 + L2 LINE L2 2141 2272 -1041 2189 179 42 28 chr10 98871787 98872285 -46717003 - MLT1D LTR MaLR 0 505 1 2295 246 105 51 chr10 98872285 98872983 -46716305 + L2 LINE L2 2272 3052 -261 2104 238 63 23 chr10 98872983 98873581 -46715707 - MLT1E2 LTR MaLR -4 622 1 2295 246 105 51 chr10 98873581 98873858 -46715430 + L2 LINE L2 3052 3313 0 342 231 55 0 chr10 98874352 98874459 -46714829 - MIR SINE MIR -17 191 71 3166 150 34 4 chr10 98874861 98875395 -46713893 + MER44D DNA MER2_type 1 605 0 454 340 57 0 chr10 98875882 98876041 -46713247 - MIR3 SINE MIR -7 201 34 1808 202 28 3 chr10 98876064 98876420 -46712868 + MLT1A1 LTR MaLR 1 365 0 471 322 116 34 chr10 98876969 98877289 -46711999 - L2 LINE L2 0 3272 2927 730 275 111 8 chr10 98877310 98877554 -46711734 + L2 LINE L2 1116 1384 -1930 21 0 0 0 chr10 98877891 98877912 -46711376 + AT_rich Low_complexity Low_complexity 1 21 0 1861 86 0 0 chr10 98878073 98878330 -46710958 - L1P LINE L1 -5870 276 20 834 27 0 27 chr10 98878332 98878442 -46710846 + L1PA3 LINE L1 6049 6155 0 655 267 0 53 chr10 98879117 98879304 -46709984 + MER5B DNA MER1_type 1 177 -1 444 208 228 0 chr10 98879314 98879463 -46709825 + MER5A DNA MER1_type 7 189 0 242 152 0 0 chr10 98879798 98879844 -46709444 - L1MC4 LINE L1 -1339 6703 6658 216 158 0 0 chr10 98879856 98879894 -46709394 + (TA)n Simple_repeat Simple_repeat 2 39 0 9366 194 40 25 chr10 98880386 98884190 -46705098 + L1PA12 LINE L1 1 4922 -2662 243 173 0 0 chr10 98884193 98884245 -46705043 + L1 LINE L1 5000 5051 -2533 * 10143 150 8 1 chr10 98884230 98887059 -46702229 + L1PA13 LINE L1 3257 6148 -15 23 33 0 0 chr10 98887059 98887089 -46702199 + AT_rich Low_complexity Low_complexity 1 30 0 418 282 32 25 chr10 98887332 98887475 -46701813 + MER5B DNA MER1_type 10 163 -26 350 61 0 0 chr10 98887542 98887591 -46701697 - MADE1 DNA Mariner 0 80 32 371 213 72 68 chr10 98887650 98887727 -46701561 - HAL1 LINE L1 -3 2504 2429 1999 167 3 0 chr10 98887727 98888038 -46701250 + AluJb SINE Alu 1 312 0 371 213 72 68 chr10 98888038 98888181 -46701107 - HAL1 LINE L1 -78 2429 2283 17704 62 3 3 chr10 98888364 98890705 -46698583 + L1P LINE L1 11 2350 -3796 824 272 109 72 chr10 98890700 98891523 -46697765 - HAL1 LINE L1 -1537 970 117 * 2053 143 7 0 chr10 98891898 98892191 -46697097 - AluSx SINE Alu -17 295 1 688 114 5 185 chr10 98893263 98893474 -46695814 - Tigger2 DNA MER2_type -1 2717 2545 922 104 7 0 chr10 98893574 98893709 -46695579 - THE1B LTR MaLR -35 329 194 895 218 11 16 chr10 98893919 98894107 -46695181 - MER5A DNA MER1_type -2 187 1 332 218 172 0 chr10 98894132 98894219 -46695069 - MER5B DNA MER1_type -2 176 75 382 312 72 8 chr10 98894318 98894443 -46694845 - L2 LINE L2 -14 3258 3126 822 125 14 42 chr10 98894454 98894598 -46694690 + AluJo SINE Alu 5 144 -168 464 198 0 0 chr10 98894994 98895085 -46694203 + MER20 DNA MER1_type 129 219 0 217 284 28 64 chr10 98895319 98895428 -46693860 + L2 LINE L2 2949 3053 -260 703 196 15 15 chr10 98895552 98895685 -46693603 - FLAM_C SINE Alu 0 133 1 1118 169 41 24 chr10 98895879 98896174 -46693114 + L1MD3 LINE L1 7687 7986 -9 278 256 0 26 chr10 98897969 98898047 -46691241 - MIR3 SINE MIR -1 207 132 239 278 12 12 chr10 98898097 98898177 -46691111 - MER5B DNA MER1_type -1 177 109 484 191 85 0 chr10 98898177 98898271 -46691017 - FRAM SINE Alu -35 141 40 752 111 9 0 chr10 98898556 98898664 -46690624 - AluSx SINE Alu -74 238 130 2103 76 0 0 chr10 98898668 98898943 -46690345 - L1PA7 LINE L1 -5 6149 5875 869 61 0 0 chr10 98898944 98899058 -46690230 + L1PA7 LINE L1 5766 5879 -275 970 96 16 0 chr10 98899058 98899183 -46690105 - AluSx SINE Alu -180 132 6 645 263 72 28 chr10 98899280 98899531 -46689757 - MLT1I LTR MaLR -147 262 1 2050 112 37 10 chr10 98899915 98900210 -46689078 + AluSx SINE Alu 1 303 -9 2109 116 0 3 chr10 98900757 98901064 -46688224 + AluSx SINE Alu 2 307 0 298 291 108 37 chr10 98901303 98901794 -46687494 - L1M4 LINE L1 -1155 4991 4466 2504 116 11 24 chr10 98901871 98902251 -46687037 - THE1C LTR MaLR 0 375 1 324 236 36 9 chr10 98902369 98902479 -46686809 - L1M4 LINE L1 -1328 4818 4706 204 163 0 0 chr10 98902536 98902579 -46686709 + (CATA)n Simple_repeat Simple_repeat 2 44 0 421 229 105 9 chr10 98902945 98903050 -46686238 + MIR SINE MIR 37 151 -111 2207 102 26 3 chr10 98903271 98903575 -46685713 + AluSq SINE Alu 1 311 -2 245 313 50 40 chr10 98903717 98903915 -46685373 - L2 LINE L2 -1783 1531 1332 6046 231 81 27 chr10 98904223 98906231 -46683057 - L1MEc LINE L1 -4244 2152 37 180 273 0 0 chr10 98907400 98907466 -46681822 + GA-rich Low_complexity Low_complexity 4 69 0 207 198 12 35 chr10 98907771 98907857 -46681431 + GA-rich Low_complexity Low_complexity 1 84 0 344 320 41 14 chr10 98908172 98908319 -46680969 + MIR3 SINE MIR 33 183 -25 7164 25 0 0 chr10 98909695 98910574 -46678714 - L1PA4 LINE L1 -3 6152 5274 2119 234 105 18 chr10 98910798 98911406 -46677882 + MLT2F LTR ERVL 1 661 -2 230 253 0 55 chr10 98911412 98911503 -46677785 - LTR67 LTR ERVL -15 542 457 226 284 95 38 chr10 98911541 98911752 -46677536 + L2 LINE L2 1685 1907 -1407 905 232 93 30 chr10 98911876 98912208 -46677080 + LTR16A LTR ERVL 97 449 -1 702 340 110 17 chr10 98912208 98912691 -46676597 + L2 LINE L2 1989 2516 -798 264 268 12 73 chr10 98913200 98913282 -46676006 - L2 LINE L2 -10 3262 3186 465 232 226 6 chr10 98913590 98913767 -46675521 - MIR SINE MIR 0 262 47 510 224 155 0 chr10 98914325 98914441 -46674847 - MER63 DNA MER1_type -302 760 1 2210 99 10 0 chr10 98914641 98914934 -46674354 - AluSx SINE Alu -2 310 15 2282 62 0 10 chr10 98914961 98915252 -46674036 - AluY SINE Alu 0 311 24 2626 210 114 85 chr10 98915280 98916095 -46673193 - MER97b DNA MER1_type? -7 1046 194 1586 166 6 54 chr10 98916095 98916408 -46672880 + AluJo SINE Alu 1 298 -14 2626 210 114 85 chr10 98916408 98916608 -46672680 - MER97b DNA MER1_type? -859 194 1 347 225 33 67 chr10 98916608 98916728 -46672560 + MER5B DNA MER1_type 63 178 0 890 220 181 46 chr10 98917089 98917611 -46671677 + L2 LINE L2 2626 3227 -86 1066 178 0 0 chr10 98917623 98917797 -46671491 - AluJb SINE Alu -10 302 129 284 284 14 0 chr10 98917799 98917873 -46671415 + L2 LINE L2 3239 3313 0 212 59 29 0 chr10 98917901 98917935 -46671353 + (TAA)n Simple_repeat Simple_repeat 2 36 0 473 279 125 14 chr10 98917983 98918191 -46671097 - HAL1 LINE L1 -113 2394 2164 315 242 10 61 chr10 98918242 98918341 -46670947 - HAL1b LINE L1 -441 907 814 559 297 35 103 chr10 98919616 98920071 -46669217 - L2 LINE L2 0 3313 2890 551 167 61 18 chr10 98920938 98921052 -46668236 - MER3 DNA MER1_type 0 209 91 180 0 0 0 chr10 98921707 98921727 -46667561 + (A)n Simple_repeat Simple_repeat 1 20 0 906 213 11 0 chr10 98921922 98922096 -46667192 - MER5B DNA MER1_type 0 178 3 288 77 0 0 chr10 98922101 98922140 -46667148 + (A)n Simple_repeat Simple_repeat 1 39 0 404 333 82 31 chr10 98922654 98922849 -46666439 - L2 LINE L2 -5 3267 3063 312 347 41 0 chr10 98922927 98923048 -46666240 + LTR16A LTR ERVL 2 127 -323 465 244 17 64 chr10 98923114 98923286 -46666002 - L2 LINE L2 -448 2866 2703 378 306 50 19 chr10 98924572 98924732 -46664556 + L1ME4a LINE L1 5931 6095 -26 22 70 0 0 chr10 98924750 98924793 -46664495 + AT_rich Low_complexity Low_complexity 1 43 0 227 203 162 14 chr10 98925328 98925402 -46663886 - L1ME LINE L1 -319 5802 5718 405 311 66 25 chr10 98925478 98925674 -46663614 - MIR SINE MIR -7 255 52 288 338 47 2 chr10 98927414 98927557 -46661731 - MIR SINE MIR -66 142 9 2892 7 0 0 chr10 98928784 98929094 -46660194 + AluYb8 SINE Alu 1 310 -8 26 0 0 0 chr10 98929409 98929435 -46659853 + AT_rich Low_complexity Low_complexity 1 26 0 294 267 95 26 chr10 98933425 98933541 -46655747 + MIR SINE MIR 116 239 -23 508 213 251 6 chr10 98933727 98933910 -46655378 + MIR SINE MIR 19 246 -16 361 341 131 5 chr10 98933962 98934176 -46655112 - MIR3 SINE MIR -16 246 8 2131 128 10 0 chr10 98935645 98935949 -46653339 + AluSx SINE Alu 1 307 -5 750 178 8 8 chr10 98935968 98936086 -46653202 + FLAM_C SINE Alu 1 118 -15 899 208 69 20 chr10 98936117 98936362 -46652926 - Charlie8 DNA MER1_type -2160 257 1 1059 299 61 39 chr10 98936743 98937384 -46651904 + L1MC4a LINE L1 5267 5921 -1887 231 196 84 0 chr10 98937525 98937632 -46651656 + (TA)n Simple_repeat Simple_repeat 2 117 0 1898 121 0 0 chr10 98937643 98937900 -46651388 - AluSx SINE Alu -17 295 39 237 267 0 67 chr10 98938618 98938708 -46650580 - L2 LINE L2 0 3272 3189 356 247 12 0 chr10 98938847 98938928 -46650360 + MER103 DNA DNA 66 147 -19 391 268 242 16 chr10 98940126 98940436 -46648852 + L1ME3A LINE L1 5506 5885 -285 21 57 0 0 chr10 98940756 98940791 -46648497 + AT_rich Low_complexity Low_complexity 1 35 0 332 232 0 0 chr10 98940817 98940886 -46648402 - L1ME2 LINE L1 -93 6071 6003 2233 107 0 0 chr10 98940907 98941196 -46648092 + AluSx SINE Alu 15 303 -9 607 320 102 47 chr10 98941393 98941952 -46647336 - L2 LINE L2 -1002 2312 1723 506 182 193 34 chr10 98942193 98942345 -46646943 + MER5A DNA MER1_type 4 183 -6 220 302 35 93 chr10 98942921 98943093 -46646195 - MER5A DNA MER1_type -24 165 4 188 350 94 5 chr10 98943361 98943564 -46645724 + L2 LINE L2 1773 1993 -1321 786 238 17 33 chr10 98943810 98943991 -46645297 - MER45A DNA AcHobo 0 178 1 195 275 132 0 chr10 98945382 98945473 -46643815 + L2 LINE L2 2560 2662 -652 11321 74 8 1 chr10 98945833 98947435 -46641853 + L1P3 LINE L1 3875 5489 -665 4876 38 0 0 chr10 98947434 98948039 -46641249 + L1PA4 LINE L1 2793 3397 -2749 * 17693 38 7 1 chr10 98948039 98950840 -46638448 + L1PA4 LINE L1 3353 6154 -1 209 306 0 0 chr10 98950840 98950889 -46638399 + L2 LINE L2 2995 3043 -229 383 324 49 7 chr10 98950915 98951057 -46638231 + MIR SINE MIR 3 150 -112 1451 155 69 0 chr10 98951112 98951344 -46637944 - AluSq SINE Alu -48 265 18 204 40 0 0 chr10 98951726 98951751 -46637537 + (TA)n Simple_repeat Simple_repeat 2 26 0 754 275 17 33 chr10 98951767 98952007 -46637281 - MIR SINE MIR -15 247 12 481 184 144 115 chr10 98952695 98952801 -46636487 - MER5A DNA MER1_type -2 187 73 781 181 9 0 chr10 98952801 98952917 -46636371 - FLAM_C SINE Alu -16 117 1 481 184 144 115 chr10 98952917 98952984 -46636304 - MER5A DNA MER1_type -116 73 9 1289 253 35 16 chr10 98953211 98953583 -46635705 - MLT1J LTR MaLR -105 406 28 222 277 0 0 chr10 98954212 98954259 -46635029 - L2 LINE L2 -16 3256 3210 2706 162 42 26 chr10 98955254 98955748 -46633540 + L1MC1 LINE L1 5819 6320 -13 590 91 0 0 chr10 99057201 99057278 -46532010 - AluJ/FLAM SINE Alu -234 78 2 2025 123 27 0 chr10 99057283 99057583 -46531705 - AluSq SINE Alu -5 308 1 1628 147 17 57 chr10 99057617 99057917 -46531371 + AluJb SINE Alu 1 288 -24 2117 104 34 0 chr10 99057924 99058222 -46531066 + AluSg SINE Alu 1 308 -2 29 28 0 0 chr10 99058471 99058507 -46530781 + GC_rich Low_complexity Low_complexity 1 36 0 27 62 0 0 chr10 99058658 99058706 -46530582 + GC_rich Low_complexity Low_complexity 1 48 0 180 0 0 0 chr10 99059261 99059281 -46530007 + (T)n Simple_repeat Simple_repeat 1 20 0 290 244 0 84 chr10 99059359 99059478 -46529810 + MIR SINE MIR 32 140 -122 2060 104 3 0 chr10 99059840 99060129 -46529159 - AluSx SINE Alu -20 292 3 279 293 121 0 chr10 99060229 99060328 -46528960 + L2 LINE L2 3160 3270 -2 1939 161 7 0 chr10 99060379 99060689 -46528599 + AluJb SINE Alu 1 312 0 423 350 68 34 chr10 99060822 99061056 -46528232 + MIR SINE MIR 3 244 -18 257 0 0 0 chr10 99061056 99061093 -46528195 - AluY SINE Alu -4 295 259 669 174 132 14 chr10 99061095 99061239 -46528049 + AluJb SINE Alu 138 298 -14 2165 117 0 22 chr10 99061590 99061906 -46527382 - AluSq SINE Alu -4 309 1 1967 122 10 13 chr10 99061906 99062209 -46527079 - AluSx SINE Alu -10 302 1 223 125 0 0 chr10 99062382 99062414 -46526874 - MER91B DNA MER1_type -123 67 36 422 215 37 9 chr10 99062451 99062558 -46526730 - L2 LINE L2 -12 3260 3151 424 299 39 16 chr10 99062559 99062686 -46526602 + MIR SINE MIR 126 255 -7 1480 185 22 0 chr10 99062825 99063095 -46526193 - MER7A DNA MER2_type -8 338 65 286 153 102 0 chr10 99063133 99063192 -46526096 - MER7A DNA MER2_type -275 73 9 2321 99 0 3 chr10 99063259 99063572 -46525716 - AluSq SINE Alu -1 312 1 1667 161 18 7 chr10 99063597 99063882 -46525406 + AluJb SINE Alu 1 288 -24 2082 99 7 10 chr10 99063893 99064195 -46525093 + AluSx SINE Alu 1 301 -11 2247 67 0 20 chr10 99064572 99064898 -46524390 - AluY SINE Alu 0 311 1 2015 105 6 51 chr10 99064974 99065151 -46524137 - AluSp SINE Alu -12 301 143 1993 80 87 7 chr10 99065151 99065439 -46523849 - AluY SINE Alu 0 311 1 2015 105 6 51 chr10 99065439 99065576 -46523712 - AluSp SINE Alu -170 143 1 742 177 0 28 chr10 99065789 99065930 -46523358 - FLAM_A SINE Alu 0 142 6 700 177 15 31 chr10 99066569 99066699 -46522589 - FLAM_C SINE Alu -4 129 2 2341 88 3 0 chr10 99066710 99067018 -46522270 - AluSp SINE Alu -4 309 1 252 309 74 49 chr10 99067068 99067230 -46522058 + L2 LINE L2 2639 2804 -510 375 155 83 0 chr10 99067383 99067467 -46521821 + MER21B LTR ERV1 98 188 -675 * 1169 231 195 22 chr10 99067452 99067715 -46521573 + MER21B LTR ERV1 355 571 -292 1285 184 79 14 chr10 99067715 99067992 -46521296 - AluJo SINE Alu -17 295 1 1169 231 195 22 chr10 99067992 99068144 -46521144 + MER21B LTR ERV1 571 842 -21 2287 84 10 0 chr10 99068205 99068503 -46520785 + AluSp SINE Alu 1 301 -12 503 254 167 8 chr10 99068524 99068764 -46520524 + L2 LINE L2 2867 3144 -169 1583 156 98 0 chr10 99068777 99069052 -46520236 - AluJb SINE Alu -6 306 5 2126 82 0 60 chr10 99069063 99069244 -46520044 - AluSq SINE Alu -13 300 145 2124 106 3 13 chr10 99069244 99069547 -46519741 - AluSx SINE Alu -12 300 1 2126 82 0 60 chr10 99069547 99069684 -46519604 - AluSq SINE Alu -168 145 1 21 0 0 0 chr10 99069692 99069713 -46519575 + AT_rich Low_complexity Low_complexity 1 21 0 2078 124 0 3 chr10 99070117 99070416 -46518872 + AluSg SINE Alu 1 298 -12 1243 85 12 0 chr10 99070691 99070856 -46518432 - AluY SINE Alu -12 299 133 2584 33 0 3 chr10 99070856 99071158 -46518130 - AluY SINE Alu -10 301 1 216 0 0 0 chr10 99071955 99071979 -46517309 + (TA)n Simple_repeat Simple_repeat 2 25 0 1877 139 30 0 chr10 99071983 99072286 -46517002 - AluSx SINE Alu 0 312 1 1765 143 21 0 chr10 99072300 99072586 -46516702 - AluSx SINE Alu -2 310 19 2078 97 24 0 chr10 99072607 99072897 -46516391 - AluSc SINE Alu -12 297 1 2012 128 10 3 chr10 99073762 99074058 -46515230 + AluJo SINE Alu 1 298 -14 1952 137 3 6 chr10 99074061 99074374 -46514914 + AluSx SINE Alu 1 312 0 2105 129 0 0 chr10 99074601 99074912 -46514376 - AluSx SINE Alu -1 311 1 188 326 53 45 chr10 99074914 99075046 -46514242 + MIR SINE MIR 116 248 -14 324 310 0 10 chr10 99075513 99075613 -46513675 + L1M4 LINE L1 5065 5163 -983 1464 146 4 8 chr10 99075613 99075853 -46513435 - AluSp SINE Alu -5 308 70 1360 152 0 0 chr10 99075983 99076193 -46513095 - AluJo SINE Alu -100 212 3 1080 97 0 42 chr10 99076396 99076561 -46512727 + AluSg/x SINE Alu 155 312 0 1934 66 0 0 chr10 99076562 99076804 -46512484 + AluY SINE Alu 1 242 -69 320 125 16 0 chr10 99076843 99076907 -46512381 + C-rich Low_complexity Low_complexity 1 65 0 1729 90 72 48 chr10 99076907 99077096 -46512192 - AluSg SINE Alu -11 299 99 2410 62 0 3 chr10 99077096 99077401 -46511887 - AluY SINE Alu -7 304 1 1729 90 72 48 chr10 99077401 99077501 -46511787 - AluSg SINE Alu -211 99 3 802 110 37 0 chr10 99077503 99077612 -46511676 - AluSg SINE Alu -196 114 2 782 169 7 34 chr10 99077718 99077866 -46511422 - AluJb SINE Alu -167 145 2 2190 92 3 3 chr10 99077869 99078164 -46511124 - AluSp SINE Alu -18 295 1 211 259 71 98 chr10 99078241 99078336 -46510952 + L2 LINE L2 3203 3296 -17 1882 144 6 10 chr10 99078336 99078649 -46510639 + AluJb SINE Alu 1 312 0 211 259 71 98 chr10 99078649 99078665 -46510623 + L2 LINE L2 3296 3311 -2 1942 109 18 0 chr10 99078819 99079122 -46510166 - AluSc SINE Alu 0 309 2 2131 118 0 19 chr10 99079123 99079436 -46509852 - AluSq SINE Alu -6 307 1 1473 173 16 62 chr10 99079559 99079882 -46509406 + AluJo SINE Alu 1 308 -4 2093 107 0 0 chr10 99079887 99080225 -46509063 + AluSx SINE Alu 3 340 0 2098 99 3 3 chr10 99080386 99080679 -46508609 - AluY SINE Alu -18 293 1 957 75 15 0 chr10 99080679 99080812 -46508476 - AluSp SINE Alu -178 135 1 206 264 0 0 chr10 99080881 99080934 -46508354 + L2 LINE L2 3261 3313 0 211 176 0 0 chr10 99081179 99081213 -46508075 + (CCG)n Simple_repeat Simple_repeat 3 36 0 272 254 11 49 chr10 99081369 99081554 -46507734 + (CGGG)n Simple_repeat Simple_repeat 1 178 0 25 51 0 0 chr10 99081630 99081669 -46507619 + GC_rich Low_complexity Low_complexity 1 39 0 26 30 0 0 chr10 99081706 99081739 -46507549 + GC_rich Low_complexity Low_complexity 1 33 0 1758 102 28 67 chr10 99081860 99082173 -46507115 + AluSg SINE Alu 9 310 0 871 298 90 32 chr10 99082177 99082605 -46506683 + L1ME3 LINE L1 5367 5839 -323 1280 165 184 12 chr10 99082605 99082860 -46506428 - AluJo SINE Alu -2 300 2 871 298 90 32 chr10 99082860 99083065 -46506223 + L1ME3 LINE L1 5839 6031 -131 1136 93 0 0 chr10 99083691 99083841 -46505447 + AluSg/x SINE Alu 146 295 -17 1799 168 0 0 chr10 99083944 99084229 -46505059 - AluJb SINE Alu -10 302 18 1699 138 0 43 chr10 99084888 99085193 -46504095 + AluJo SINE Alu 1 292 -20 1001 88 0 7 chr10 99085251 99085387 -46503901 + AluSq/x SINE Alu 1 135 -177 2112 120 7 3 chr10 99085387 99085696 -46503592 + AluSq SINE Alu 1 310 -3 2356 57 0 17 chr10 99085697 99085998 -46503290 - AluY SINE Alu -15 296 1 362 207 117 0 chr10 99086476 99086587 -46502701 + MER113 DNA MER1_type? 69 192 -329 2060 129 3 0 chr10 99086625 99086928 -46502360 - AluSx SINE Alu -8 304 1 289 278 79 16 chr10 99086929 99087055 -46502233 + MER113 DNA MER1_type? 265 398 -123 211 269 19 0 chr10 99088866 99088918 -46500370 + MER5A DNA MER1_type 30 82 -107 203 273 0 0 chr10 99089715 99089759 -46499529 + (CCCCAG)n Simple_repeat Simple_repeat 2 45 0 232 296 247 22 chr10 99091247 99091310 -46497978 + L2 LINE L2 2624 2672 -642 1966 103 59 10 chr10 99091310 99091600 -46497688 - AluSp SINE Alu -8 305 2 232 296 247 22 chr10 99091600 99091803 -46497485 + L2 LINE L2 2672 2950 -364 260 268 62 82 chr10 99091861 99092055 -46497233 + L2 LINE L2 3122 3311 -2 180 380 53 11 chr10 99092078 99092265 -46497023 - MIR SINE MIR -55 207 13 1959 138 20 0 chr10 99092888 99093185 -46496103 - AluSx SINE Alu -2 310 8 762 175 0 0 chr10 99093230 99093350 -46495938 - AluJb SINE Alu -58 254 135 991 168 6 0 chr10 99093352 99093519 -46495769 - AluSg/x SINE Alu -16 296 129 1870 98 4 0 chr10 99093520 99093766 -46495522 - AluSx SINE Alu -59 253 7 1225 168 111 43 chr10 99093774 99094054 -46495234 - AluJo SINE Alu -13 299 1 785 276 77 6 chr10 99094723 99095150 -46494138 - L2 LINE L2 -160 3153 2689 1994 132 0 16 chr10 99095308 99095611 -46493677 - AluSx SINE Alu -14 298 1 1187 126 0 16 chr10 99095615 99095781 -46493507 - AluSp SINE Alu -9 304 140 2046 118 7 13 chr10 99095781 99096085 -46493203 - AluSq SINE Alu -11 302 1 1187 126 0 16 chr10 99096085 99096101 -46493187 - AluSp SINE Alu -173 140 125 2110 131 0 0 chr10 99096174 99096480 -46492808 - AluSx SINE Alu -6 306 1 438 315 43 37 chr10 99096489 99096813 -46492475 - L1ME4a LINE L1 -274 5847 5522 2311 61 10 0 chr10 99096843 99097136 -46492152 - AluY SINE Alu -15 296 1 1765 143 0 11 chr10 99097222 99097501 -46491787 - AluSx SINE Alu 0 312 37 2166 63 40 23 chr10 99097513 99097812 -46491476 - AluY SINE Alu -7 304 1 892 50 0 41 chr10 99097812 99097933 -46491355 - AluY SINE Alu -175 136 21 186 260 110 102 chr10 99098323 99098450 -46490838 + MIR SINE MIR 20 147 -115 344 259 47 35 chr10 99098900 99099070 -46490218 - L2 LINE L2 -464 2850 2679 186 133 0 0 chr10 99099545 99099575 -46489713 + (GAA)n Simple_repeat Simple_repeat 2 31 0 831 273 169 10 chr10 99099965 99100066 -46489222 - L1MC4 LINE L1 -1 8041 7957 1575 153 54 37 chr10 99100066 99100218 -46489070 - AluJb SINE Alu -3 299 151 2001 117 3 39 chr10 99100218 99100388 -46488900 - AluSq SINE Alu -16 297 122 207 0 0 0 chr10 99100388 99100411 -46488877 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2028 92 26 0 chr10 99100412 99100685 -46488603 - AluY SINE Alu -31 280 1 2001 117 3 39 chr10 99100685 99100820 -46488468 - AluSq SINE Alu -190 123 1 1575 153 54 37 chr10 99100820 99100961 -46488327 - AluJb SINE Alu -151 151 1 831 273 169 10 chr10 99100961 99101244 -46488044 - L1MC4 LINE L1 -85 7957 7596 858 87 40 0 chr10 99101254 99101380 -46487908 - FLAM_C SINE Alu -12 131 1 2538 265 119 34 chr10 99101381 99102086 -46487202 - L1MC4 LINE L1 -491 7551 6907 1850 159 0 16 chr10 99102086 99102400 -46486888 - AluJb SINE Alu -3 309 1 2538 265 119 34 chr10 99102400 99102569 -46486719 - L1MC4 LINE L1 -1135 6907 6754 1693 199 0 3 chr10 99102569 99102866 -46486422 + AluJo SINE Alu 1 296 -16 2538 265 119 34 chr10 99102866 99103094 -46486194 - L1MC4 LINE L1 -1288 6754 6354 2140 116 0 7 chr10 99103138 99103440 -46485848 + AluSx SINE Alu 1 300 -12 1475 156 40 0 chr10 99103449 99103699 -46485589 + AluJb SINE Alu 1 260 -52 2011 86 68 0 chr10 99103793 99104071 -46485217 + AluSg SINE Alu 1 297 -13 193 271 0 0 chr10 99104197 99104245 -46485043 + MER5B DNA MER1_type 1 48 -130 624 144 21 0 chr10 99104263 99104360 -46484928 - AluJb SINE Alu -24 288 190 1198 240 72 0 chr10 99104382 99104661 -46484627 + AluJo SINE Alu 2 300 -2 341 307 0 50 chr10 99104668 99104808 -46484480 + MER5B DNA MER1_type 46 178 0 367 286 103 43 chr10 99105146 99105380 -46483908 + L1MC4a LINE L1 5812 6059 -1749 2020 96 0 0 chr10 99105430 99105701 -46483587 + AluY SINE Alu 39 309 -2 1328 147 70 80 chr10 99105709 99106023 -46483265 + AluSx SINE Alu 1 311 -1 439 236 0 41 chr10 99106743 99106866 -46482422 - MER3 DNA MER1_type 0 209 92 2146 123 0 0 chr10 99106906 99107206 -46482082 - AluSx SINE Alu -12 300 1 1585 118 4 0 chr10 99107211 99107449 -46481839 - AluSg SINE Alu -12 298 60 2070 99 7 10 chr10 99107449 99107740 -46481548 - AluSx SINE Alu -16 296 6 484 239 175 5 chr10 99107740 99108014 -46481274 - L1M4 LINE L1 -3785 3172 2834 2201 71 26 32 chr10 99108021 99108330 -46480958 - AluSx SINE Alu -5 307 1 331 331 138 17 chr10 99108330 99108511 -46480777 - L1M4 LINE L1 -5450 1409 1207 294 332 106 22 chr10 99108934 99109160 -46480128 - L1M4 LINE L1 -6613 246 2 1084 97 7 7 chr10 99109663 99109818 -46479470 + AluSq SINE Alu 1 155 -158 1732 174 3 7 chr10 99109998 99110302 -46478986 + AluJo SINE Alu 1 303 -9 2381 80 0 0 chr10 99110344 99110644 -46478644 + AluSg SINE Alu 1 300 -10 283 135 0 157 chr10 99110782 99110871 -46478417 + L1MD2 LINE L1 5848 5922 -437 1579 148 0 0 chr10 99110871 99111143 -46478145 - AluSx SINE Alu 0 316 45 244 227 7 187 chr10 99111144 99111294 -46477994 + L1MD2 LINE L1 6067 6189 -170 1711 160 10 7 chr10 99111295 99111589 -46477699 + AluSx SINE Alu 2 296 -16 1753 163 0 10 chr10 99111878 99112167 -46477121 - AluJb SINE Alu -25 287 2 1987 132 3 16 chr10 99112239 99112542 -46476746 + AluSg SINE Alu 1 299 -11 2098 113 0 0 chr10 99112552 99112845 -46476443 + AluSp SINE Alu 7 299 -14 2396 60 0 0 chr10 99112849 99113148 -46476140 + AluY SINE Alu 1 299 -12 1988 98 51 0 chr10 99113148 99113423 -46475865 + AluSc SINE Alu 1 289 -20 1554 129 65 0 chr10 99113435 99113683 -46475605 + AluSx SINE Alu 36 299 -13 839 178 7 0 chr10 99113741 99113876 -46475412 + AluJo SINE Alu 2 137 -175 1271 145 42 169 chr10 99113877 99114214 -46475074 + AluSx SINE Alu 3 296 -16 1649 164 40 13 chr10 99114242 99114546 -46474742 - AluJb SINE Alu 0 312 1 2247 68 3 26 chr10 99114546 99114854 -46474434 - AluY SINE Alu -10 301 1 2192 95 0 40 chr10 99114855 99115180 -46474108 - AluSx SINE Alu 0 312 1 2281 109 0 0 chr10 99115189 99115500 -46473788 - AluSx SINE Alu -1 311 1 2094 120 3 3 chr10 99115726 99116026 -46473262 + AluSx SINE Alu 1 300 -12 2396 88 0 0 chr10 99116251 99116556 -46472732 - AluY SINE Alu -6 305 1 2067 129 0 19 chr10 99116557 99116875 -46472413 - AluSx SINE Alu 0 312 1 1808 142 40 10 chr10 99116898 99117201 -46472087 - AluSx SINE Alu 0 312 1 812 164 8 15 chr10 99117203 99117337 -46471951 - AluJo/FLAM SINE Alu -169 133 1 832 220 100 5 chr10 99117438 99117638 -46471650 - MER20 DNA MER1_type 0 219 1 264 30 0 0 chr10 99117674 99117707 -46471581 + (TG)n Simple_repeat Simple_repeat 2 34 0 2403 48 3 0 chr10 99117707 99117987 -46471301 - AluY SINE Alu -25 286 3 2090 125 0 3 chr10 99117989 99118292 -46470996 - AluSx SINE Alu -10 302 1 2010 112 6 35 chr10 99118294 99118607 -46470681 - AluSx SINE Alu -8 304 1 2137 114 3 0 chr10 99118626 99118924 -46470364 + AluSx SINE Alu 1 299 -13 441 222 102 28 chr10 99119074 99119243 -46470045 + L1M3 LINE L1 5439 5618 -543 640 190 0 0 chr10 99119318 99119418 -46469870 - AluJo SINE Alu -81 231 132 2031 121 4 0 chr10 99119434 99119745 -46469543 + AluSx SINE Alu 1 312 0 1279 167 3 147 chr10 99119748 99120089 -46469199 + AluJo SINE Alu 2 293 -9 781 185 0 0 chr10 99120091 99120221 -46469067 - AluJo SINE Alu -172 130 1 2242 99 0 0 chr10 99120271 99120565 -46468723 - AluY SINE Alu -17 294 1 867 215 12 0 chr10 99120579 99120742 -46468546 - FRAM SINE Alu 0 166 2 2097 105 11 0 chr10 99120746 99121031 -46468257 - AluSg SINE Alu -18 292 5 1581 144 3 125 chr10 99121039 99121405 -46467883 - AluSx SINE Alu 0 302 5 672 131 7 109 chr10 99121495 99121632 -46467656 - FLAM_C SINE Alu -20 123 1 21 0 0 0 chr10 99122053 99122074 -46467214 + AT_rich Low_complexity Low_complexity 1 21 0 1137 58 0 7 chr10 99122094 99122233 -46467055 + AluY SINE Alu 1 138 -173 803 59 0 0 chr10 99122232 99122333 -46466955 - AluS SINE Alu -211 101 1 * 357 214 12 0 chr10 99122576 99122660 -46466628 + L1MC/D LINE L1 5727 5811 -522 1474 132 48 8 chr10 99122697 99122948 -46466340 + AluSx SINE Alu 42 302 -10 336 505 0 0 chr10 99122951 99123112 -46466176 + AluJ/monomer SINE Alu 2 46 -256 * 699 169 0 14 chr10 99123097 99123115 -46466173 + MER4C LTR ERV1 119 136 -329 2101 70 6 64 chr10 99123115 99123429 -46465859 + AluY SINE Alu 2 297 -14 699 169 0 14 chr10 99123429 99123552 -46465736 + MER4C LTR ERV1 136 258 -207 594 164 9 9 chr10 99123610 99123726 -46465562 + MER4C LTR ERV1 273 388 -77 242 116 23 0 chr10 99123731 99123774 -46465514 + CT-rich Low_complexity Low_complexity 5 48 0 264 188 0 0 chr10 99123787 99123851 -46465437 + CT-rich Low_complexity Low_complexity 2 65 0 1505 110 0 0 chr10 99123880 99124080 -46465208 - AluSq SINE Alu -113 200 1 501 103 0 0 chr10 99124082 99124160 -46465128 + MER4C LTR ERV1 377 454 -11 2307 110 0 0 chr10 99124212 99124521 -46464767 + AluSc SINE Alu 1 309 0 787 139 7 0 chr10 99124663 99124800 -46464488 - MER101 LTR ERV1 0 474 337 954 87 14 0 chr10 99124813 99124951 -46464337 - AluSg/x SINE Alu 0 312 173 1428 150 160 3 chr10 99124951 99125251 -46464037 - MER101 LTR ERV1 -126 348 2 2268 98 0 0 chr10 99125392 99125689 -46463599 + AluSx SINE Alu 1 297 -15 340 245 110 59 chr10 99125733 99125758 -46463530 + L1MC5 LINE L1 7497 7519 -442 2255 79 0 26 chr10 99125758 99126063 -46463225 + AluY SINE Alu 1 297 -14 2006 148 0 3 chr10 99126071 99126374 -46462914 + AluSx SINE Alu 1 302 -10 340 245 110 59 chr10 99126374 99126553 -46462735 + L1MC5 LINE L1 7525 7729 -232 2140 117 19 3 chr10 99126553 99126860 -46462428 + AluSx SINE Alu 1 312 0 340 245 110 59 chr10 99126860 99126918 -46462370 + L1MC5 LINE L1 7729 7783 -178 276 191 0 0 chr10 99126969 99127016 -46462272 + Alu SINE Alu 1 47 -256 1474 188 37 11 chr10 99127016 99127288 -46462000 - AluJo SINE Alu -19 283 5 1050 121 0 65 chr10 99127294 99127465 -46461823 + MER4E LTR ERV1 594 752 -27 2251 76 0 3 chr10 99127465 99127785 -46461503 + AluSp SINE Alu 1 313 0 1050 121 0 65 chr10 99127785 99127812 -46461476 + MER4E LTR ERV1 752 779 0 2257 97 0 0 chr10 99128086 99128384 -46460904 - AluSx SINE Alu -14 298 1 1418 161 41 8 chr10 99128484 99128726 -46460562 + AluJb SINE Alu 37 286 -26 1690 167 3 17 chr10 99128769 99129062 -46460226 + AluJb SINE Alu 1 289 -23 191 345 112 0 chr10 99129344 99129460 -46459828 - MIR3 SINE MIR -69 139 11 887 169 6 73 chr10 99129857 99130035 -46459253 - AluJo/FRAM SINE Alu 0 302 137 534 100 0 22 chr10 99130037 99130127 -46459161 - AluSq SINE Alu 0 313 226 1277 127 0 6 chr10 99130127 99130308 -46458980 - AluSq SINE Alu -133 180 1 239 137 0 20 chr10 99130310 99130361 -46458927 - FRAM SINE Alu -171 4294967291 1 2273 95 23 0 chr10 99130399 99130705 -46458583 - AluSp SINE Alu 0 313 1 2484 49 3 7 chr10 99130718 99131026 -46458262 - AluY SINE Alu -4 307 1 203 234 247 0 chr10 99131155 99131232 -46458056 + MIR SINE MIR 52 147 -115 1781 155 3 27 chr10 99131463 99131759 -46457529 + AluSx SINE Alu 1 289 -23 1875 164 0 7 chr10 99131765 99132070 -46457218 + AluSx SINE Alu 1 303 -9 2089 112 41 0 chr10 99132087 99132264 -46457024 - AluY SINE Alu -2 309 114 207 69 0 0 chr10 99132264 99132293 -46456995 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2089 112 41 0 chr10 99132293 99132410 -46456878 - AluY SINE Alu -197 114 3 1690 159 24 10 chr10 99132412 99132707 -46456581 - AluJb SINE Alu -13 299 1 1497 202 13 18 chr10 99132769 99133150 -46456138 - L1M4 LINE L1 -1100 5046 4668 295 286 93 12 chr10 99133198 99133359 -46455929 - L1MC5 LINE L1 -179 7782 7609 994 170 12 6 chr10 99133363 99133528 -46455760 - AluJ SINE Alu 0 302 137 1167 194 127 12 chr10 99133541 99133794 -46455494 - AluSg SINE Alu -15 295 14 662 302 32 40 chr10 99133801 99134175 -46455113 - L1MC4 LINE L1 -333 7709 7339 325 301 52 4 chr10 99134254 99134391 -46454897 - MIR SINE MIR -62 146 12 221 319 17 34 chr10 99135040 99135159 -46454129 + L2 LINE L2 2952 3068 -204 960 119 56 0 chr10 99135601 99135744 -46453544 - AluJ SINE Alu -161 151 1 1997 125 3 19 chr10 99135746 99136057 -46453231 - AluSx SINE Alu -6 306 1 709 171 34 27 chr10 99136112 99136258 -46453030 - L1MB3 LINE L1 -2 6181 6035 2075 104 0 32 chr10 99136260 99136568 -46452720 - AluSx SINE Alu -14 298 1 2176 99 0 0 chr10 99136665 99137010 -46452278 - AluSx SINE Alu 0 345 1 778 143 24 16 chr10 99137013 99137139 -46452149 - AluJo/FLAM SINE Alu -185 127 1 758 145 0 83 chr10 99137244 99137389 -46451899 - FLAM_C SINE Alu 0 133 1 518 283 22 0 chr10 99138038 99138176 -46451112 + MIR SINE MIR 44 184 -78 1121 222 8 12 chr10 99138240 99138483 -46450805 - MIR SINE MIR -19 243 2 900 131 0 26 chr10 99139115 99139257 -46450031 + FRAM SINE Alu 28 167 -145 2307 76 0 16 chr10 99139257 99139573 -46449715 + AluY SINE Alu 1 311 0 802 232 0 24 chr10 99139745 99139913 -46449375 + AluJb SINE Alu 136 299 -13 2182 109 0 13 chr10 99139998 99140302 -46448986 + AluSx SINE Alu 1 300 -12 2309 97 0 6 chr10 99140356 99140667 -46448621 - AluSc SINE Alu 0 309 1 2018 151 0 19 chr10 99140676 99140994 -46448294 - AluSx SINE Alu 0 312 1 1560 138 32 87 chr10 99142914 99143080 -46446208 - AluSx SINE Alu -17 295 152 1862 105 76 7 chr10 99143080 99143357 -46445931 + AluSx SINE Alu 1 296 -16 1560 138 32 87 chr10 99143357 99143502 -46445786 - AluSx SINE Alu -160 152 1 2169 116 0 0 chr10 99144365 99144659 -46444629 - AluSq SINE Alu -19 294 1 202 312 244 29 chr10 99146575 99146780 -46442508 + MIR SINE MIR 14 262 0 329 260 0 42 chr10 99146784 99146880 -46442408 + FLAM_A SINE Alu 42 133 0 2303 62 31 0 chr10 99147008 99147297 -46441991 + AluY SINE Alu 1 298 -13 289 296 17 55 chr10 99147328 99147509 -46441779 - L1MEd LINE L1 -4921 1705 1450 2075 109 23 3 chr10 99147511 99147815 -46441473 - AluSx SINE Alu -2 310 1 351 278 0 0 chr10 99147893 99147983 -46441305 + MER94 DNA DNA 1 90 -44 1052 199 0 10 chr10 99148253 99148454 -46440834 + AluJo SINE Alu 22 220 -92 33 25 0 0 chr10 99148480 99148520 -46440768 + AT_rich Low_complexity Low_complexity 1 40 0 480 377 72 15 chr10 99149126 99149391 -46439897 - L1MC4a LINE L1 -1817 5991 5712 2214 98 0 0 chr10 99149467 99149763 -46439525 + AluSx SINE Alu 1 296 -16 2280 104 3 0 chr10 99149787 99150095 -46439193 - AluSc SINE Alu 0 309 1 1864 120 10 27 chr10 99150298 99150463 -46438825 - AluSx SINE Alu -14 298 139 2364 80 0 0 chr10 99150463 99150764 -46438524 - AluSx SINE Alu -11 301 1 1864 120 10 27 chr10 99150764 99150897 -46438391 - AluSx SINE Alu -173 139 5 245 268 0 0 chr10 99151418 99151474 -46437814 + MIR SINE MIR 92 147 -115 182 337 34 11 chr10 99151591 99151680 -46437608 - MIR SINE MIR -73 135 45 2308 107 7 0 chr10 99151991 99152300 -46436988 - AluSx SINE Alu -1 311 1 658 202 0 0 chr10 99152360 99152469 -46436819 + FLAM_A SINE Alu 15 123 -19 1796 188 0 3 chr10 99152483 99152803 -46436485 + 7SLRNA srpRNA srpRNA 1 319 -1 2046 110 17 3 chr10 99152865 99153156 -46436132 + AluSx SINE Alu 1 295 -17 1394 198 38 26 chr10 99153935 99154279 -46435009 - MLT1B LTR MaLR 0 390 43 311 299 37 0 chr10 99154766 99154873 -46434415 - MLT1K LTR MaLR -317 271 161 1886 111 40 7 chr10 99155583 99155880 -46433408 - AluSx SINE Alu -4 308 2 1820 155 10 17 chr10 99156094 99156391 -46432897 - AluJb SINE Alu -16 296 2 683 237 0 0 chr10 99156867 99156998 -46432290 - FLAM_A SINE Alu -2 131 1 283 276 187 36 chr10 99157008 99157233 -46432055 - L1MC4a LINE L1 -1913 5895 5637 193 197 28 113 chr10 99157547 99157618 -46431670 + L2 LINE L2 2407 2471 -843 285 29 0 0 chr10 99157993 99158027 -46431261 + (TG)n Simple_repeat Simple_repeat 2 35 0 23 0 0 0 chr10 99159675 99159698 -46429590 + GC_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr10 99160065 99160088 -46429200 + AT_rich Low_complexity Low_complexity 1 23 0 207 139 0 0 chr10 99160589 99160625 -46428663 + (A)n Simple_repeat Simple_repeat 1 36 0 337 313 226 22 chr10 99162226 99162731 -46426557 + L2 LINE L2 1975 2582 -732 2131 114 3 0 chr10 99162829 99163119 -46426169 + AluSx SINE Alu 10 300 -12 2329 94 0 7 chr10 99163771 99164080 -46425208 - AluSx SINE Alu -5 307 1 2466 71 0 0 chr10 99164085 99164395 -46424893 - AluY SINE Alu -1 310 1 1995 125 14 0 chr10 99164406 99164695 -46424593 - AluSx SINE Alu -19 293 1 25 31 0 0 chr10 99164695 99164727 -46424561 + AT_rich Low_complexity Low_complexity 1 32 0 2214 92 0 16 chr10 99164727 99165043 -46424245 - AluSq SINE Alu -1 312 2 871 123 39 0 chr10 99165043 99165173 -46424115 - AluSq/x SINE Alu -178 135 1 365 275 45 56 chr10 99165173 99165351 -46423937 + L2 LINE L2 2923 3098 -174 201 39 0 0 chr10 99165555 99165581 -46423707 + (CTG)n Simple_repeat Simple_repeat 3 28 0 203 286 10 41 chr10 99166025 99166123 -46423165 + (TTGGGG)n Simple_repeat Simple_repeat 2 96 0 22 0 0 0 chr10 99166949 99166971 -46422317 + GC_rich Low_complexity Low_complexity 1 22 0 601 230 40 0 chr10 99167950 99168076 -46421212 + FLAM_C SINE Alu 1 131 -2 2079 131 6 6 chr10 99168131 99168443 -46420845 - AluSx SINE Alu 0 312 1 515 204 31 0 chr10 99168473 99168571 -46420717 + AluJ SINE Alu 29 129 -183 624 223 0 0 chr10 99168573 99168685 -46420603 + AluJ SINE Alu 38 149 -163 939 187 12 6 chr10 99168709 99168880 -46420408 + AluJ SINE Alu 125 296 -16 2110 101 0 10 chr10 99168886 99169017 -46420271 + AluY SINE Alu 5 136 -175 2535 50 0 0 chr10 99169017 99169320 -46419968 + AluY SINE Alu 1 303 -8 2110 101 0 10 chr10 99169320 99169486 -46419802 + AluY SINE Alu 136 299 -12 2163 88 29 13 chr10 99169492 99169798 -46419490 - AluSq SINE Alu -2 311 1 2154 107 0 0 chr10 99170077 99170379 -46418909 - AluSx SINE Alu 0 302 1 1340 116 0 0 chr10 99170383 99170572 -46418716 - AluSg/x SINE Alu -5 307 119 682 182 0 54 chr10 99170672 99170697 -46418591 - FLAM_C SINE Alu -172 140 115 2129 118 7 0 chr10 99170697 99171001 -46418287 + AluSp SINE Alu 1 306 -7 682 182 0 54 chr10 99171001 99171123 -46418165 - FLAM_C SINE Alu -197 115 1 2284 94 0 3 chr10 99171335 99171642 -46417646 - AluSx SINE Alu -6 306 1 282 243 72 18 chr10 99171651 99171762 -46417526 - L1ME3 LINE L1 -2 6160 6044 1567 126 92 44 chr10 99172525 99172681 -46416607 - AluJb SINE Alu -4 308 161 2279 92 3 10 chr10 99172681 99172995 -46416293 - AluSp SINE Alu -1 312 1 1567 126 92 44 chr10 99172995 99173132 -46416156 - AluJb SINE Alu -151 161 1 648 157 0 41 chr10 99173148 99173182 -46416106 - FLAM_A SINE Alu -170 141 107 1908 128 7 20 chr10 99173182 99173478 -46415810 + AluSg SINE Alu 1 292 -18 648 157 0 41 chr10 99173478 99173564 -46415724 - FLAM_A SINE Alu -204 107 26 306 203 29 67 chr10 99173597 99173702 -46415586 - AluSc SINE Alu -108 191 112 213 211 88 0 chr10 99173725 99173782 -46415506 - MIR SINE MIR -189 73 12 736 220 0 0 chr10 99174242 99174374 -46414914 - AluJo SINE Alu -176 136 5 185 326 129 8 chr10 99175008 99175140 -46414148 + MIR SINE MIR 77 224 -38 2202 86 0 45 chr10 99175951 99176264 -46413024 - AluSx SINE Alu -13 299 1 1085 143 143 22 chr10 99176649 99176873 -46412415 + AluJo SINE Alu 49 299 -13 2422 84 0 0 chr10 99176890 99177198 -46412090 - AluSq SINE Alu 0 313 6 235 217 0 0 chr10 99177209 99177255 -46412033 + FRAM SINE Alu 1 38 -129 316 256 39 13 chr10 99177259 99177337 -46411951 - L1MCa LINE L1 -4351 2075 1996 316 320 40 0 chr10 99177314 99177414 -46411874 + L1MC3 LINE L1 6543 6646 -1139 * 349 209 44 7 chr10 99177357 99177447 -46411841 - L1MC4 LINE L1 -1339 6983 1977 708 119 0 56 chr10 99177476 99177602 -46411686 + FRAM SINE Alu 21 139 -37 198 350 175 8 chr10 99177878 99177998 -46411290 - MIR SINE MIR -75 187 48 301 247 52 52 chr10 99178747 99178844 -46410444 - L1M4 LINE L1 -364 5814 5718 2128 113 0 7 chr10 99179360 99179670 -46409618 - AluSq SINE Alu -5 308 1 1817 125 69 0 chr10 99179679 99179968 -46409320 - AluSq SINE Alu 0 313 5 2105 107 0 0 chr10 99179978 99180269 -46409019 - AluY SINE Alu -16 295 5 182 193 74 0 chr10 99180269 99180318 -46408970 - MIR SINE MIR -63 145 103 1897 144 0 46 chr10 99181353 99181680 -46407608 - AluJb SINE Alu 0 312 1 2063 133 7 0 chr10 99181740 99182040 -46407248 - AluSx SINE Alu -10 302 1 210 330 157 0 chr10 99183366 99183481 -46405807 + L2 LINE L2 3054 3186 -86 468 286 17 39 chr10 99183572 99183750 -46405538 + MER58B DNA MER1_type 168 341 0 328 216 99 25 chr10 99183796 99183956 -46405332 + MIR SINE MIR 51 227 -35 1993 128 0 39 chr10 99184341 99184459 -46404829 + AluSx SINE Alu 1 122 -190 2365 58 7 10 chr10 99184459 99184767 -46404521 + AluY SINE Alu 1 307 -4 1993 128 0 39 chr10 99184767 99184954 -46404334 + AluSx SINE Alu 122 294 -18 180 0 0 0 chr10 99185669 99185689 -46403599 + (T)n Simple_repeat Simple_repeat 1 20 0 2229 101 20 0 chr10 99186344 99186650 -46402638 - AluSx SINE Alu 0 312 1 1201 133 5 24 chr10 99186678 99186888 -46402400 + AluJb SINE Alu 17 222 -90 1519 217 105 8 chr10 99186906 99187298 -46401990 - L1MB5 LINE L1 -69 6105 5676 2413 69 3 0 chr10 99187310 99187616 -46401672 - AluY SINE Alu -2 309 3 2116 130 0 3 chr10 99187618 99187918 -46401370 - AluSx SINE Alu -13 299 1 1234 147 0 80 chr10 99187928 99188179 -46401109 - AluJo SINE Alu 0 312 82 1788 130 8 0 chr10 99188280 99188534 -46400754 - AluSq SINE Alu -57 256 1 2386 76 3 16 chr10 99188543 99188857 -46400431 - AluSq SINE Alu -3 310 1 1063 151 0 6 chr10 99188867 99189039 -46400249 + FRAM SINE Alu 1 163 -13 2204 119 0 3 chr10 99189750 99190060 -46399228 + AluSx SINE Alu 1 309 -3 191 351 27 0 chr10 99190185 99190259 -46399029 - MIR SINE MIR -126 136 61 476 281 33 0 chr10 99190383 99190504 -46398784 - MIR SINE MIR -33 229 105 311 308 0 33 chr10 99190692 99190783 -46398505 + L2 LINE L2 3175 3262 -10 261 296 72 0 chr10 99190974 99191099 -46398189 + L2 LINE L2 1860 1993 -1321 184 161 0 0 chr10 99191322 99191353 -46397935 - MIR SINE MIR -13 249 219 1511 197 10 17 chr10 99191417 99191711 -46397577 - AluJo SINE Alu -20 292 1 240 294 120 11 chr10 99191717 99191809 -46397479 - MIR SINE MIR -50 212 111 1809 138 3 27 chr10 99191952 99192249 -46397039 + AluJo SINE Alu 13 302 -10 1823 159 0 7 chr10 99192678 99192979 -46396309 + AluSx SINE Alu 1 299 -13 856 273 15 51 chr10 99193155 99193488 -46395800 + MLT1J LTR MaLR 17 337 -174 2110 79 0 7 chr10 99193506 99193785 -46395503 + AluSx SINE Alu 21 297 -15 239 363 132 6 chr10 99194087 99194269 -46395019 - MIR SINE MIR -19 243 39 843 268 120 25 chr10 99194772 99194804 -46394484 - L1MD3 LINE L1 0 7995 7967 2148 99 10 7 chr10 99194804 99195108 -46394180 - AluSg SINE Alu -4 306 2 843 268 120 25 chr10 99195108 99195441 -46393847 - L1MD3 LINE L1 -28 7967 7595 402 265 49 12 chr10 99195497 99195659 -46393629 - L1MC4 LINE L1 -659 7383 7216 1602 170 71 64 chr10 99195660 99195721 -46393567 - MSTB1 LTR MaLR -5 427 368 2192 100 0 13 chr10 99195721 99196021 -46393267 + AluSq SINE Alu 1 296 -17 1602 170 71 64 chr10 99196021 99196383 -46392905 - MSTB1 LTR MaLR -64 368 1 441 222 81 37 chr10 99196393 99197172 -46392116 - L1MC4 LINE L1 -680 7128 6508 432 258 50 44 chr10 99197198 99197380 -46391908 - L1MC3 LINE L1 -1368 6417 6235 288 310 44 0 chr10 99197766 99197879 -46391409 - MLT1L LTR MaLR -129 486 369 1709 150 0 21 chr10 99200397 99200684 -46388604 - AluJo SINE Alu -2 310 30 937 106 7 26 chr10 99200823 99200974 -46388314 - AluSg/x SINE Alu 0 310 163 224 306 14 90 chr10 99202290 99202434 -46386854 - L2 LINE L2 -505 2809 2677 21 57 0 0 chr10 99202965 99203000 -46386288 + AT_rich Low_complexity Low_complexity 1 35 0 2365 79 7 3 chr10 99206492 99206795 -46382493 - AluSq SINE Alu -9 304 1 351 267 35 17 chr10 99206843 99206959 -46382329 + MIR SINE MIR 20 137 -125 185 281 16 31 chr10 99207275 99207339 -46381949 + MIR3 SINE MIR 97 159 -49 380 319 42 16 chr10 99208213 99208404 -46380884 - MLT1K LTR MaLR -16 572 377 2349 78 0 7 chr10 99209666 99209972 -46379316 - AluSq SINE Alu -9 304 1 2299 101 0 3 chr10 99212380 99212686 -46376602 + AluSx SINE Alu 1 305 -7 1255 185 122 11 chr10 99216285 99216555 -46372733 - AluJo SINE Alu -12 300 1 1645 236 50 29 chr10 99216625 99217895 -46371393 - L1MB7 LINE L1 -11 6173 4881 594 252 91 24 chr10 99218042 99218296 -46370992 - MLT1C LTR MaLR -10 457 187 197 319 0 14 chr10 99218649 99218718 -46370570 + L2 LINE L2 3208 3275 -38 427 303 174 45 chr10 99218820 99218935 -46370353 + L1ME4a LINE L1 5598 5697 -424 721 220 0 8 chr10 99218935 99219067 -46370221 + AluJo/FLAM SINE Alu 1 131 -171 1969 138 0 3 chr10 99219068 99219365 -46369923 + AluSx SINE Alu 2 297 -15 427 303 174 45 chr10 99219365 99219511 -46369777 + L1ME4a LINE L1 5696 5895 -226 570 231 0 0 chr10 99219556 99219673 -46369615 + L1MB3 LINE L1 6052 6168 -15 1371 174 0 59 chr10 99219692 99219797 -46369491 + AluSq SINE Alu 30 140 -173 2196 103 0 10 chr10 99219797 99220107 -46369181 + AluSc SINE Alu 1 307 -2 1371 174 0 59 chr10 99220107 99220288 -46369000 + AluSq SINE Alu 140 299 -14 2363 86 0 13 chr10 99220308 99220621 -46368667 + AluSc SINE Alu 1 309 0 1800 170 0 6 chr10 99220631 99220942 -46368346 + AluJo SINE Alu 1 309 -3 1494 167 53 14 chr10 99222701 99222983 -46366305 + AluSx SINE Alu 1 293 -19 2116 114 7 0 chr10 99223005 99223304 -46365984 + AluSx SINE Alu 1 301 -11 850 228 0 12 chr10 99223504 99223675 -46365613 + FRAM SINE Alu 1 169 -7 1704 154 26 20 chr10 99223692 99223998 -46365290 + AluSx SINE Alu 1 308 -4 1133 290 95 62 chr10 99224110 99225035 -46364253 + L1ME3 LINE L1 4882 5936 -226 2417 48 0 0 chr10 99225035 99225328 -46363960 + AluY SINE Alu 1 293 -18 1133 290 95 62 chr10 99225328 99225557 -46363731 + L1ME3 LINE L1 5936 6156 -6 893 104 15 22 chr10 99225798 99225932 -46363356 + FLAM_C SINE Alu 1 133 0 2450 54 0 0 chr10 99225940 99226235 -46363053 + AluY SINE Alu 3 297 -14 1505 180 29 10 chr10 99226669 99226975 -46362313 + AluJo SINE Alu 1 312 0 1239 223 109 90 chr10 99227111 99227407 -46361881 - MER77 LTR ERV1 -10 595 283 2170 102 0 3 chr10 99227407 99227702 -46361586 - AluSx SINE Alu -14 298 5 1239 223 109 90 chr10 99227702 99227929 -46361359 - MER77 LTR ERV1 -322 283 62 22 0 0 0 chr10 99227951 99227973 -46361315 + AT_rich Low_complexity Low_complexity 1 22 0 1179 120 5 26 chr10 99228224 99228415 -46360873 - AluSg/x SINE Alu -8 304 118 697 100 0 45 chr10 99229475 99229585 -46359703 - AluSg/x SINE Alu -6 306 202 1895 118 21 3 chr10 99229816 99230104 -46359184 + AluSx SINE Alu 1 293 -19 2307 96 0 0 chr10 99231483 99231785 -46357503 - AluSc SINE Alu -7 302 1 2159 101 3 0 chr10 99231812 99232110 -46357178 + AluSg SINE Alu 1 299 -11 701 197 150 0 chr10 99232261 99232408 -46356880 + AluJo SINE Alu 119 287 -25 657 39 0 0 chr10 99233116 99233194 -46356094 + AluS SINE Alu 2 79 -233 1543 134 118 8 chr10 99233211 99233473 -46355815 + AluSg1 SINE Alu 14 304 -5 641 245 27 7 chr10 99233473 99233620 -46355668 + MER58B DNA MER1_type 155 304 -37 1810 162 0 3 chr10 99233624 99233926 -46355362 + AluJo SINE Alu 1 301 -11 244 321 99 19 chr10 99234129 99234291 -46354997 + L1ME LINE L1 5584 5758 -412 1717 78 21 4 chr10 99234509 99234751 -46354537 + AluSg SINE Alu 1 246 -64 2176 114 0 0 chr10 99235176 99235484 -46353804 - AluSg SINE Alu -2 308 1 819 120 0 0 chr10 99235772 99235880 -46353408 - FLAM_C SINE Alu -25 118 11 2199 113 0 0 chr10 99237445 99237747 -46351541 + AluSc SINE Alu 1 302 -7 2170 90 3 13 chr10 99237817 99238116 -46351172 + AluSp SINE Alu 1 296 -17 948 118 0 0 chr10 99238997 99239132 -46350156 + FLAM_C SINE Alu 9 143 0 225 94 0 0 chr10 99239663 99239695 -46349593 + (CTGGGG)n Simple_repeat Simple_repeat 2 33 0 251 262 0 0 chr10 99239806 99239867 -46349421 + GA-rich Low_complexity Low_complexity 2 62 0 305 319 31 8 chr10 99240250 99240400 -46348888 - MIR3 SINE MIR -54 154 22 325 242 30 61 chr10 99240665 99240764 -46348524 + MIR SINE MIR 57 152 -56 1057 147 0 0 chr10 99241038 99241201 -46348087 + AluJb SINE Alu 137 299 -13 342 0 0 0 chr10 99241201 99241239 -46348049 + (TA)n Simple_repeat Simple_repeat 2 39 0 1975 41 0 4 chr10 99241429 99241672 -46347616 - AluY SINE Alu -69 242 1 220 213 33 16 chr10 99242390 99242451 -46346837 - MIR SINE MIR -63 145 84 2039 97 18 0 chr10 99242705 99243015 -46346273 - AluSx SINE Alu 0 315 1 972 107 0 0 chr10 99243016 99243147 -46346141 - AluSq/x SINE Alu -175 137 7 1448 169 0 38 chr10 99243172 99243433 -46345855 - AluJo SINE Alu -56 256 6 336 272 10 0 chr10 99243446 99243549 -46345739 - L1M4 LINE L1 -5241 1614 1511 1453 169 0 40 chr10 99243550 99243823 -46345465 - AluJb SINE Alu -6 306 45 743 212 88 12 chr10 99243829 99243999 -46345289 - AluJo SINE Alu -14 298 116 520 206 48 48 chr10 99243999 99244145 -46345143 - L1M4 LINE L1 -5357 1502 1357 2223 88 0 22 chr10 99244151 99244470 -46344818 - AluSx SINE Alu 0 312 1 1653 154 19 41 chr10 99244491 99244810 -46344478 - AluJb SINE Alu 0 312 1 246 295 0 0 chr10 99245049 99245110 -46344178 - L1M4 LINE L1 -5878 977 917 483 307 37 20 chr10 99245260 99245504 -46343784 - L1M4 LINE L1 -6280 575 328 1740 175 0 7 chr10 99245561 99245874 -46343414 - AluSx SINE Alu 0 311 1 1637 154 0 70 chr10 99245968 99246299 -46342989 + AluJo SINE Alu 3 310 -2 292 310 40 10 chr10 99246620 99246720 -46342568 - MIR SINE MIR -79 183 81 361 154 15 0 chr10 99247058 99247123 -46342165 - AluSx SINE Alu -2 300 235 1285 105 11 0 chr10 99247123 99247304 -46341984 - AluSx SINE Alu -129 183 1 757 261 199 29 chr10 99247319 99247745 -46341543 + MLT1G LTR MaLR 43 530 -12 2048 111 19 7 chr10 99248055 99248081 -46341207 - AluSq SINE Alu -2 311 287 387 0 0 0 chr10 99248081 99248124 -46341164 + (TA)n Simple_repeat Simple_repeat 1 43 0 2048 111 19 7 chr10 99248124 99248404 -46340884 - AluSq SINE Alu -26 287 1 439 115 0 0 chr10 99248433 99248494 -46340794 + AluS SINE Alu 2 62 -251 1871 117 7 4 chr10 99248496 99248770 -46340518 - AluSx SINE Alu -7 305 31 803 181 0 14 chr10 99248771 99248909 -46340379 - AluJb SINE Alu -175 137 2 2042 114 0 0 chr10 99249024 99249314 -46339974 + AluSx SINE Alu 12 301 -11 1502 177 23 48 chr10 99249886 99250196 -46339092 + AluJb SINE Alu 1 302 0 1598 202 0 13 chr10 99250257 99250564 -46338724 + AluJb SINE Alu 1 303 -9 1905 133 17 3 chr10 99250589 99250889 -46338399 - AluSq SINE Alu -9 304 1 565 191 45 9 chr10 99250959 99251069 -46338219 + AluJo/FLAM SINE Alu 1 114 -188 2066 95 3 3 chr10 99251069 99251396 -46337892 - AluY SINE Alu 0 327 1 2315 89 0 0 chr10 99251419 99251723 -46337565 + AluSc SINE Alu 5 308 -1 1704 189 0 7 chr10 99251739 99252041 -46337247 + AluJb SINE Alu 1 300 -12 1272 116 0 0 chr10 99252072 99252245 -46337043 + AluSg/x SINE Alu 135 307 -5 750 193 1 4 chr10 99252248 99252389 -46336899 + L1MA6 LINE L1 5691 5831 -333 2144 101 23 0 chr10 99252389 99252695 -46336593 + AluSq SINE Alu 1 313 0 750 193 1 4 chr10 99252695 99252727 -46336561 + L1MA6 LINE L1 5831 5862 -302 1998 118 10 7 chr10 99252790 99253096 -46336192 + AluSg SINE Alu 1 307 -3 913 96 8 0 chr10 99253306 99253431 -46335857 + AluSq/x SINE Alu 9 134 -178 1961 84 81 0 chr10 99253432 99253716 -46335572 + AluY SINE Alu 1 307 -4 2209 153 117 47 chr10 99253718 99253814 -46335474 + L1MB3 LINE L1 5578 5666 -517 1904 124 10 13 chr10 99253814 99254113 -46335175 + AluSx SINE Alu 1 298 -14 2209 153 117 47 chr10 99254113 99254283 -46335005 + L1MB3 LINE L1 5666 5823 -360 1964 103 0 43 chr10 99254283 99254584 -46334704 + AluSx SINE Alu 3 290 -22 258 32 0 0 chr10 99254584 99254615 -46334673 + (GGAA)n Simple_repeat Simple_repeat 3 33 0 2209 153 117 47 chr10 99254615 99254874 -46334414 + L1MB3 LINE L1 5822 6142 -41 2349 61 0 3 chr10 99254874 99255167 -46334121 + AluY SINE Alu 1 292 -19 1724 163 7 3 chr10 99255179 99255479 -46333809 + AluSg SINE Alu 1 301 -9 2205 89 7 0 chr10 99255491 99255784 -46333504 + AluY SINE Alu 2 296 -15 266 206 15 0 chr10 99256242 99256310 -46332978 + CT-rich Low_complexity Low_complexity 3 71 0 1999 120 0 43 chr10 99256316 99256506 -46332782 - AluJb SINE Alu 0 312 140 2214 92 0 0 chr10 99256506 99256800 -46332488 - AluSg SINE Alu -16 294 1 1999 120 0 43 chr10 99256800 99256935 -46332353 - AluJb SINE Alu -172 140 1 914 124 30 55 chr10 99256936 99257021 -46332267 - L1MB3 LINE L1 -43 6140 6054 1747 152 40 7 chr10 99257021 99257317 -46331971 - AluSx SINE Alu -6 306 1 914 124 30 55 chr10 99257317 99257432 -46331856 - L1MB3 LINE L1 -129 6054 5945 299 220 11 77 chr10 99257524 99257615 -46331673 - L1MB3 LINE L1 -199 5969 5885 416 208 0 0 chr10 99257615 99257692 -46331596 - AluSq SINE Alu -2 311 235 913 85 31 15 chr10 99257692 99257822 -46331466 - AluSq SINE Alu -170 142 11 2059 131 0 0 chr10 99257862 99258159 -46331129 - AluSx SINE Alu -15 297 1 199 118 0 59 chr10 99258203 99258254 -46331034 + (CCCCCA)n Simple_repeat Simple_repeat 1 48 0 2317 80 0 6 chr10 99258356 99258668 -46330620 - AluY SINE Alu -1 310 1 1901 101 22 0 chr10 99258668 99258935 -46330353 - AluSg SINE Alu -16 294 22 2156 122 0 0 chr10 99259177 99259488 -46329800 + AluSx SINE Alu 1 311 -1 2174 98 7 0 chr10 99259497 99259794 -46329494 + AluSg SINE Alu 1 299 -11 1672 102 0 0 chr10 99259795 99260020 -46329268 - AluSq SINE Alu -88 225 1 1688 193 3 0 chr10 99260305 99260610 -46328678 + AluJo SINE Alu 1 306 -6 2130 105 0 7 chr10 99260610 99260935 -46328353 + AluSc SINE Alu 1 309 0 1799 94 101 18 chr10 99260938 99261215 -46328073 + AluSx SINE Alu 4 303 -9 2083 132 0 0 chr10 99261817 99262113 -46327175 + AluSg SINE Alu 1 296 -14 2209 175 73 31 chr10 99262211 99262248 -46327040 - L1MB3 LINE L1 -1 6182 6148 2146 103 3 0 chr10 99262248 99262540 -46326748 - AluSx SINE Alu -19 293 1 2209 175 73 31 chr10 99262540 99263051 -46326237 - L1MB3 LINE L1 -35 6148 5611 1664 125 3 90 chr10 99263051 99263114 -46326174 - AluSx SINE Alu -19 293 226 2299 74 3 0 chr10 99263114 99263410 -46325878 - AluY SINE Alu -14 297 1 1664 125 3 90 chr10 99263410 99263539 -46325749 - AluSx SINE Alu -86 226 87 1286 45 0 7 chr10 99263539 99263693 -46325595 - L1PA7 LINE L1 -11 6143 5991 233 0 62 0 chr10 99263698 99263730 -46325558 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1664 125 3 90 chr10 99263730 99263851 -46325437 - AluSx SINE Alu -229 83 1 2165 82 6 31 chr10 99264351 99264486 -46324802 + AluY SINE Alu 1 138 -173 2369 74 0 10 chr10 99264486 99264797 -46324491 + AluY SINE Alu 1 308 -3 2165 82 6 31 chr10 99264797 99264978 -46324310 + AluY SINE Alu 138 309 -2 1908 129 0 13 chr10 99265121 99265423 -46323865 - AluJo SINE Alu -14 298 1 254 292 150 0 chr10 99265423 99265543 -46323745 - MIR SINE MIR -47 215 78 2036 75 6 63 chr10 99265797 99266115 -46323173 - AluSq SINE Alu -12 301 2 1969 146 0 3 chr10 99266118 99266420 -46322868 - AluSx SINE Alu -11 301 1 2331 77 0 10 chr10 99266428 99266738 -46322550 - AluY SINE Alu -4 307 1 2139 109 0 0 chr10 99266786 99267080 -46322208 + AluSx SINE Alu 10 303 -9 21 36 0 0 chr10 99267095 99267123 -46322165 + AT_rich Low_complexity Low_complexity 1 28 0 1924 146 0 0 chr10 99267145 99267439 -46321849 - AluJb SINE Alu -16 296 3 2425 62 0 13 chr10 99267569 99267876 -46321412 - AluY SINE Alu -8 303 1 1318 171 7 36 chr10 99268038 99268312 -46320976 + AluJo SINE Alu 1 266 -46 62 14 0 0 chr10 99268316 99268385 -46320903 + AT_rich Low_complexity Low_complexity 1 69 0 1994 72 47 4 chr10 99269869 99270147 -46319141 - AluSx SINE Alu -22 290 1 912 115 0 0 chr10 99271388 99271518 -46317770 - AluJo SINE Alu -178 134 5 288 0 0 0 chr10 99272199 99272231 -46317057 + (TTA)n Simple_repeat Simple_repeat 2 33 0 2078 111 0 0 chr10 99272441 99272730 -46316558 - AluSg SINE Alu -16 294 6 2011 103 31 3 chr10 99273029 99273320 -46315968 - AluSq SINE Alu -14 299 1 1784 129 77 0 chr10 99273404 99273691 -46315597 - AluSq SINE Alu -4 309 1 791 209 40 0 chr10 99273970 99274118 -46315170 - FRAM SINE Alu -9 157 4 2127 75 7 3 chr10 99274125 99274441 -46314847 - AluSp SINE Alu 0 317 1 1276 147 79 40 chr10 99274463 99274738 -46314550 - AluJo SINE Alu 0 314 30 1034 117 13 0 chr10 99275390 99275544 -46313744 - AluSg/x SINE Alu -1 309 154 1737 53 0 0 chr10 99275547 99275755 -46313533 - AluSq SINE Alu -105 208 1 448 197 63 63 chr10 99275765 99275907 -46313381 - MIR SINE MIR -74 188 47 1524 176 3 32 chr10 99275997 99276309 -46312979 + AluJb SINE Alu 1 303 -9 1892 197 124 45 chr10 99276389 99276896 -46312392 - MLT1F1 LTR MaLR -8 559 13 830 155 23 0 chr10 99276914 99277043 -46312245 - FLAM_C SINE Alu -1 132 1 1867 92 38 0 chr10 99277054 99277316 -46311972 - AluSg SINE Alu -3 307 36 1082 152 0 6 chr10 99277352 99277517 -46311771 + AluSg/x SINE Alu 133 296 -14 1877 116 10 20 chr10 99277581 99277892 -46311396 + AluSx SINE Alu 1 312 0 1581 135 98 7 chr10 99277987 99278261 -46311027 + AluSg SINE Alu 1 299 -11 1767 161 17 17 chr10 99278380 99278679 -46310609 + AluJb SINE Alu 1 299 -13 1601 193 40 7 chr10 99278718 99279014 -46310274 + AluJo SINE Alu 1 306 -6 746 164 0 0 chr10 99279458 99279574 -46309714 - FLAM_C SINE Alu -25 118 3 2185 97 3 0 chr10 99279584 99279874 -46309414 - AluSq SINE Alu -22 291 1 816 138 57 0 chr10 99280369 99280492 -46308796 - AluSq/x SINE Alu -181 131 2 525 164 138 0 chr10 99280635 99280751 -46308537 - L1MB5 LINE L1 0 6174 6043 2337 83 0 0 chr10 99280756 99281058 -46308230 - AluY SINE Alu -9 302 1 868 208 6 6 chr10 99281060 99281219 -46308069 - FRAM SINE Alu -7 159 1 661 193 0 83 chr10 99281287 99281432 -46307856 + FLAM_A SINE Alu 1 133 0 2441 77 0 0 chr10 99281453 99281764 -46307524 - AluY SINE Alu 0 311 1 22 0 0 0 chr10 99281774 99281796 -46307492 + AT_rich Low_complexity Low_complexity 1 22 0 828 155 23 8 chr10 99281802 99281931 -46307357 + AluSq/x SINE Alu 3 133 -179 2419 57 0 7 chr10 99281940 99282239 -46307049 + AluY SINE Alu 1 297 -14 2114 119 0 0 chr10 99282309 99282611 -46306677 - AluSx SINE Alu -10 302 1 803 149 19 149 chr10 99283265 99283399 -46305889 + MER46A DNA MER2_type 1 151 -2580 2698 109 12 92 chr10 99283399 99283469 -46305819 + MER83 LTR ERV1 1 75 -373 2156 120 0 0 chr10 99283469 99283770 -46305518 + AluSq SINE Alu 1 301 -12 2698 109 12 92 chr10 99283770 99283987 -46305301 + MER83 LTR ERV1 75 308 -140 2325 86 0 7 chr10 99283987 99284289 -46304999 + AluSq SINE Alu 1 300 -13 2698 109 12 92 chr10 99284289 99284414 -46304874 + MER83 LTR ERV1 308 372 -76 2064 108 3 16 chr10 99284414 99284720 -46304568 - AluSx SINE Alu -10 302 1 2698 109 12 92 chr10 99284720 99284792 -46304496 + MER83 LTR ERV1 372 448 0 803 149 19 149 chr10 99284792 99284926 -46304362 + MER46A DNA MER2_type 151 234 -2 254 255 163 0 chr10 99284951 99285074 -46304214 - MIR SINE MIR -17 245 99 221 175 0 0 chr10 99285731 99285771 -46303517 + T-rich Low_complexity Low_complexity 1 40 0 2015 117 10 3 chr10 99285913 99286222 -46303066 - AluSx SINE Alu -1 311 1 1494 157 104 0 chr10 99286222 99286490 -46302798 - AluJo SINE Alu -15 297 2 249 196 89 0 chr10 99286774 99286830 -46302458 + MIR SINE MIR 63 123 -85 1974 122 3 3 chr10 99286831 99287126 -46302162 - AluSx SINE Alu -17 295 1 933 129 0 0 chr10 99287131 99287263 -46302025 - FLAM_C SINE Alu -10 133 2 1925 110 28 0 chr10 99287626 99287908 -46301380 - AluSx SINE Alu -18 294 5 942 156 0 13 chr10 99288030 99288184 -46301104 + FRAM SINE Alu 4 155 -21 897 239 17 29 chr10 99288184 99288422 -46300866 - MER58B DNA MER1_type -37 304 70 2070 99 0 7 chr10 99288422 99288714 -46300574 + AluSc SINE Alu 1 290 -19 661 126 0 0 chr10 99288717 99288812 -46300476 - AluJ/FLAM SINE Alu -215 97 3 212 242 0 0 chr10 99288825 99288891 -46300397 + (TA)n Simple_repeat Simple_repeat 1 66 0 1572 146 30 27 chr10 99288891 99289010 -46300278 - L1MB3 LINE L1 -7 6176 6059 2185 90 3 19 chr10 99289010 99289322 -46299966 - AluSx SINE Alu -5 307 1 1572 146 30 27 chr10 99289322 99289503 -46299785 - L1MB3 LINE L1 -124 6059 5875 1277 189 10 42 chr10 99289505 99289812 -46299476 + AluSp SINE Alu 2 298 -5 777 124 0 0 chr10 99289812 99289917 -46299371 + AluSc SINE Alu 132 236 -73 190 139 28 0 chr10 99290157 99290193 -46299095 + MIR SINE MIR 106 142 -120 2234 85 23 0 chr10 99290300 99290605 -46298683 + AluSp SINE Alu 1 312 -1 549 176 0 0 chr10 99291262 99291353 -46297935 + AluJo SINE Alu 122 212 -100 1135 148 36 31 chr10 99291361 99291425 -46297863 - AluJb SINE Alu -115 197 135 2432 65 0 3 chr10 99291425 99291735 -46297553 - AluYa5 SINE Alu -2 309 1 1135 148 36 31 chr10 99291735 99291866 -46297422 - AluJb SINE Alu -177 135 1 1278 211 0 36 chr10 99291867 99292032 -46297256 - AluJo SINE Alu -17 295 144 1840 124 57 0 chr10 99292032 99292315 -46296973 - AluSg SINE Alu -11 299 1 1278 211 0 36 chr10 99292315 99292452 -46296836 - AluJo SINE Alu -168 144 4 2106 94 43 10 chr10 99293162 99293461 -46295827 + AluSg SINE Alu 1 309 -1 2296 88 0 0 chr10 99293830 99294138 -46295150 - AluY SINE Alu -3 308 1 2044 136 0 3 chr10 99294141 99294443 -46294845 - AluSx SINE Alu -11 301 1 1791 166 0 3 chr10 99294621 99294916 -46294372 - AluJo SINE Alu -18 294 1 778 185 0 7 chr10 99294920 99295055 -46294233 - AluJo/FRAM SINE Alu -4 308 175 1574 89 0 5 chr10 99295056 99295270 -46294018 + AluSg/x SINE Alu 86 298 -12 1813 160 3 10 chr10 99295649 99295962 -46293326 - AluJo SINE Alu -1 311 1 2341 80 3 10 chr10 99296453 99296767 -46292521 - AluSp SINE Alu -1 312 1 1099 155 5 25 chr10 99296779 99296959 -46292329 - AluJo SINE Alu 0 312 130 1904 139 7 10 chr10 99296959 99297262 -46292026 - AluSx SINE Alu -8 304 3 2161 114 3 0 chr10 99297262 99297570 -46291718 - AluSp SINE Alu -2 311 3 1099 155 5 25 chr10 99297570 99297588 -46291700 - AluJo SINE Alu -180 132 117 649 246 171 0 chr10 99297605 99297792 -46291496 + MER20 DNA MER1_type 1 219 0 369 127 32 0 chr10 99297870 99297933 -46291355 - MSTB LTR MaLR 0 426 362 1680 162 7 36 chr10 99297942 99298082 -46291206 + AluJb SINE Alu 3 146 -166 2553 38 0 16 chr10 99298082 99298398 -46290890 + AluY SINE Alu 1 311 0 1680 162 7 36 chr10 99298398 99298565 -46290723 + AluJb SINE Alu 146 301 -11 810 147 0 42 chr10 99298565 99298698 -46290590 + L1MB3 LINE L1 6053 6181 -2 2233 102 0 3 chr10 99298707 99299010 -46290278 + AluSg SINE Alu 1 302 -8 1976 114 7 4 chr10 99299019 99299341 -46289947 + AluSq SINE Alu 1 323 0 198 164 284 0 chr10 99299895 99299962 -46289326 + MIR SINE MIR 108 193 -69 1883 125 30 0 chr10 99300120 99300416 -46288872 - AluSx SINE Alu -3 309 5 1093 174 0 0 chr10 99300506 99300701 -46288587 + AluJo SINE Alu 118 312 0 1786 121 0 92 chr10 99300748 99301094 -46288194 - AluYb8 SINE Alu -4 314 1 2457 66 0 0 chr10 99301094 99301395 -46287893 - AluSp SINE Alu -12 301 1 2306 93 0 0 chr10 99301413 99301723 -46287565 - AluY SINE Alu -1 310 1 2192 95 0 10 chr10 99301723 99302026 -46287262 - AluY SINE Alu -8 303 3 22 0 0 0 chr10 99302096 99302118 -46287170 + AT_rich Low_complexity Low_complexity 1 22 0 1294 156 0 95 chr10 99302118 99302413 -46286875 - AluJo SINE Alu -10 302 36 352 253 74 11 chr10 99302808 99302903 -46286385 + MIR SINE MIR 110 210 -52 2187 82 10 0 chr10 99303114 99303405 -46285883 - AluSp SINE Alu -19 294 1 1896 119 7 20 chr10 99303405 99303699 -46285589 - AluSx SINE Alu -22 290 1 844 102 0 8 chr10 99303714 99303832 -46285456 + FLAM_C SINE Alu 11 127 -16 2022 99 0 26 chr10 99303905 99304207 -46285081 - AluSg SINE Alu -16 294 1 1609 161 0 7 chr10 99304212 99304491 -46284797 - AluJb SINE Alu -10 302 26 180 71 0 0 chr10 99304506 99304512 -46284776 + (T)n Simple_repeat Simple_repeat 1 6 -22 1838 151 0 7 chr10 99304512 99304804 -46284484 + AluSx SINE Alu 1 290 -22 180 71 0 0 chr10 99304804 99304825 -46284463 + (T)n Simple_repeat Simple_repeat 5 28 0 236 146 0 24 chr10 99304847 99304888 -46284400 + MER58A DNA MER1_type 37 76 -31 267 137 9 256 chr10 99304938 99305013 -46284275 - MER96B DNA MER1_type? -251 166 74 778 148 0 16 chr10 99305013 99305141 -46284147 + FLAM_A SINE Alu 5 130 -3 267 137 9 256 chr10 99305141 99305167 -46284121 - MER96B DNA MER1_type? -343 74 43 2216 82 0 0 chr10 99305167 99305447 -46283841 + AluSq SINE Alu 1 280 -33 267 137 9 256 chr10 99305447 99305555 -46283733 - MER96B DNA MER1_type? -374 43 8 186 43 0 0 chr10 99305888 99305911 -46283377 + (TTCA)n Simple_repeat Simple_repeat 4 26 0 710 174 0 33 chr10 99305912 99306033 -46283255 - FLAM_C SINE Alu -15 118 2 2218 119 0 0 chr10 99306253 99306565 -46282723 - AluSx SINE Alu 0 312 1 2168 102 7 0 chr10 99306565 99306859 -46282429 - AluSx SINE Alu -14 298 3 779 134 0 8 chr10 99306998 99307117 -46282171 + FLAM_C SINE Alu 1 118 -15 818 128 8 0 chr10 99307799 99307924 -46281364 - FRAM SINE Alu -21 155 30 2000 144 7 0 chr10 99308072 99308377 -46280911 + AluJb SINE Alu 1 307 -5 2192 86 3 13 chr10 99308397 99308699 -46280589 - AluSg SINE Alu -9 301 3 2219 97 0 3 chr10 99309246 99309546 -46279742 + AluSq SINE Alu 1 299 -14 1640 167 13 17 chr10 99309556 99309856 -46279432 + AluJo SINE Alu 1 299 -13 1996 108 26 19 chr10 99309906 99310213 -46279075 - AluSx SINE Alu 0 312 4 567 231 156 9 chr10 99310234 99310446 -46278842 - L2 LINE L2 -334 2979 2743 2665 26 3 0 chr10 99311761 99312070 -46277218 + AluYb8 SINE Alu 1 310 -8 701 186 0 0 chr10 99312116 99312229 -46277059 + FRAM SINE Alu 42 154 -22 1730 152 13 25 chr10 99312236 99312551 -46276737 + AluJo SINE Alu 1 311 -1 207 100 0 0 chr10 99312837 99312867 -46276421 + (TA)n Simple_repeat Simple_repeat 1 30 0 2032 95 0 89 chr10 99313184 99313359 -46275929 - AluSx SINE Alu -5 307 118 2288 70 0 20 chr10 99313359 99313661 -46275627 - AluY SINE Alu -8 303 8 2032 95 0 89 chr10 99313661 99313676 -46275612 - AluSx SINE Alu -194 118 103 2342 75 0 0 chr10 99313676 99313971 -46275317 - AluY SINE Alu -16 295 1 2032 95 0 89 chr10 99313971 99314116 -46275172 - AluSx SINE Alu -209 103 1 262 355 0 0 chr10 99314318 99314411 -46274877 - L2 LINE L2 0 3313 3221 2334 80 0 3 chr10 99314411 99314711 -46274577 + AluY SINE Alu 1 299 -12 2355 74 0 0 chr10 99314724 99315023 -46274265 + AluY SINE Alu 10 308 -3 1909 136 31 0 chr10 99315055 99315349 -46273939 - AluSx SINE Alu -9 303 1 634 107 0 0 chr10 99315488 99315572 -46273716 + AluSq/x SINE Alu 42 125 -187 607 132 0 0 chr10 99315576 99315667 -46273621 + FRAM SINE Alu 72 162 -14 1041 100 25 12 chr10 99315667 99315827 -46273461 + AluSq SINE Alu 1 162 -151 260 240 170 0 chr10 99315848 99315948 -46273340 - LTR33A LTR ERVL -110 413 297 1068 135 5 77 chr10 99316195 99316320 -46272968 + AluJo SINE Alu 12 118 -194 2075 118 13 0 chr10 99316320 99316624 -46272664 + AluSx SINE Alu 3 310 -2 1068 135 5 77 chr10 99316624 99316706 -46272582 + AluJo SINE Alu 118 204 -108 1820 82 49 0 chr10 99316707 99316975 -46272313 + AluSp SINE Alu 31 310 0 365 218 177 0 chr10 99316982 99317106 -46272182 + MIR SINE MIR 20 165 -97 209 259 35 35 chr10 99318754 99318812 -46270476 + MIR SINE MIR 16 73 -189 536 211 6 18 chr10 99318908 99318979 -46270309 + CT-rich Low_complexity Low_complexity 1 71 -93 1951 145 16 3 chr10 99318979 99319282 -46270006 - AluSx SINE Alu 0 312 6 536 211 6 18 chr10 99319282 99319376 -46269912 + CT-rich Low_complexity Low_complexity 71 164 0 1853 138 3 20 chr10 99319388 99319686 -46269602 - AluJo SINE Alu -19 293 1 2058 103 23 17 chr10 99319718 99319846 -46269442 + AluSx SINE Alu 1 127 -185 2209 91 13 0 chr10 99319846 99320153 -46269135 + AluY SINE Alu 1 311 0 2058 103 23 17 chr10 99320153 99320324 -46268964 + AluSx SINE Alu 127 302 -10 2314 81 7 3 chr10 99320611 99320920 -46268368 - AluSg SINE Alu 0 310 1 949 115 0 7 chr10 99321037 99321176 -46268112 + FRAM SINE Alu 29 166 -10 241 61 0 0 chr10 99321738 99321771 -46267517 + MIR SINE MIR 111 143 -119 208 139 28 0 chr10 99321951 99321987 -46267301 + G-rich Low_complexity Low_complexity 1 37 0 710 262 47 0 chr10 99322759 99322950 -46266338 + MER20 DNA MER1_type 20 219 0 1921 155 3 0 chr10 99323033 99323336 -46265952 + AluJo SINE Alu 1 304 -8 1919 125 17 3 chr10 99323490 99323779 -46265509 - AluSq SINE Alu -20 293 1 2222 71 19 13 chr10 99323779 99324087 -46265201 - AluY SINE Alu -1 310 1 1567 180 14 7 chr10 99324090 99324385 -46264903 - AluJo SINE Alu -15 297 1 1004 126 0 0 chr10 99324387 99324530 -46264758 - AluJb SINE Alu -25 287 145 709 269 176 55 chr10 99324828 99325192 -46264096 - MLT1J LTR MaLR -4 507 100 961 187 0 11 chr10 99325195 99325377 -46263911 - AluJo SINE Alu -132 180 1 202 299 45 0 chr10 99325548 99325615 -46263673 + L2 LINE L2 3242 3311 -2 2344 75 0 10 chr10 99325807 99326113 -46263175 + AluY SINE Alu 1 303 -8 2023 121 3 13 chr10 99326118 99326423 -46262865 + AluSp SINE Alu 1 302 -11 1029 161 0 0 chr10 99326686 99326848 -46262440 - AluSg/x SINE Alu -14 296 135 876 225 10 34 chr10 99326848 99327057 -46262231 - AluJb SINE Alu -108 204 1 279 189 0 0 chr10 99327078 99327131 -46262157 - L1M3 LINE L1 -610 5561 5509 213 39 0 0 chr10 99327232 99327258 -46262030 + (A)n Simple_repeat Simple_repeat 1 26 0 1975 140 0 0 chr10 99327539 99327831 -46261457 - AluSx SINE Alu -20 292 1 1538 132 107 15 chr10 99327831 99327970 -46261318 - AluJb SINE Alu -15 297 172 189 0 0 0 chr10 99327970 99327991 -46261297 + (ATTG)n Simple_repeat Simple_repeat 4 24 0 1728 68 137 12 chr10 99327991 99328239 -46261049 - AluY SINE Alu -32 279 1 1538 132 107 15 chr10 99328239 99328370 -46260918 - AluJb SINE Alu -139 173 1 877 117 39 0 chr10 99328791 99328919 -46260369 + AluJo/FLAM SINE Alu 1 133 -169 2012 118 3 29 chr10 99328922 99329034 -46260254 + AluSx SINE Alu 1 114 -198 2180 94 7 3 chr10 99329034 99329332 -46259956 - AluSq SINE Alu -13 300 2 2012 118 3 29 chr10 99329332 99329532 -46259756 + AluSx SINE Alu 114 305 -7 2135 108 17 0 chr10 99329532 99329828 -46259460 + AluSx SINE Alu 1 301 -11 1587 148 48 42 chr10 99329838 99330148 -46259140 + AluJb SINE Alu 1 312 0 2498 56 0 0 chr10 99330205 99330508 -46258780 + AluY SINE Alu 1 303 -8 526 275 23 12 chr10 99330611 99330782 -46258506 - HAL1 LINE L1 -89 2418 2246 2048 104 0 27 chr10 99330934 99331231 -46258057 - AluSg SINE Alu -21 289 1 2198 102 6 13 chr10 99331231 99331544 -46257744 - AluSx SINE Alu -1 311 1 1927 139 7 0 chr10 99331546 99331833 -46257455 - AluSx SINE Alu -23 289 1 251 325 63 8 chr10 99332219 99332345 -46256943 + L2 LINE L2 2910 3042 -271 2555 152 29 103 chr10 99332380 99332487 -46256801 + L1MB3 LINE L1 5558 5671 -512 2277 65 10 23 chr10 99332487 99332793 -46256495 + AluY SINE Alu 1 302 -9 2059 135 7 0 chr10 99332803 99333106 -46256182 + AluSg SINE Alu 1 305 -5 2305 63 0 23 chr10 99333109 99333411 -46255877 + AluY SINE Alu 1 295 -16 2555 152 29 103 chr10 99333411 99333581 -46255707 + L1MB3 LINE L1 5682 5863 -320 1757 188 3 0 chr10 99333581 99333889 -46255399 + AluSx SINE Alu 1 309 -3 2555 152 29 103 chr10 99333889 99334227 -46255061 + L1MB3 LINE L1 5863 6142 -41 1698 111 0 0 chr10 99334227 99334461 -46254827 + AluSq SINE Alu 1 234 -79 408 299 13 25 chr10 99334512 99334663 -46254625 - MIR SINE MIR -65 143 23 207 290 0 75 chr10 99334715 99334808 -46254480 - MIR SINE MIR -69 193 108 674 211 34 0 chr10 99335543 99335690 -46253598 + MIR SINE MIR 32 183 -79 924 189 0 0 chr10 99335690 99335859 -46253429 - FRAM SINE Alu -7 169 1 590 151 0 11 chr10 99335934 99336027 -46253261 + AluJ/FLAM SINE Alu 1 92 -220 1856 126 55 3 chr10 99336131 99336424 -46252864 - AluSg SINE Alu -1 309 2 2469 74 3 0 chr10 99336491 99336803 -46252485 - AluSp SINE Alu 0 313 1 577 227 47 8 chr10 99336809 99336937 -46252351 - FLAM_A SINE Alu 0 142 10 198 267 120 0 chr10 99337055 99337130 -46252158 + MIR SINE MIR 41 124 -138 1385 163 40 116 chr10 99337262 99337524 -46251764 + L1MB3 LINE L1 5428 5650 -533 2500 58 3 0 chr10 99337524 99337836 -46251452 + AluSp SINE Alu 1 313 0 1385 163 40 116 chr10 99337836 99337977 -46251311 + L1MB3 LINE L1 5650 5800 -383 1711 156 44 3 chr10 99338043 99338338 -46250950 - AluJb SINE Alu 0 312 6 2240 146 37 10 chr10 99338352 99338390 -46250898 + L1MB3 LINE L1 5788 5824 -359 2305 93 0 0 chr10 99338390 99338690 -46250598 + AluSc SINE Alu 1 300 -9 2017 121 0 19 chr10 99338694 99339001 -46250287 + AluSq SINE Alu 1 301 -12 2240 146 37 10 chr10 99339001 99339340 -46249948 + L1MB3 LINE L1 5826 6180 -3 258 250 97 77 chr10 99339633 99339829 -46249459 + L1ME3A LINE L1 5963 6162 -8 239 270 27 0 chr10 99339856 99339930 -46249358 + L1ME4a LINE L1 5956 6031 -90 2162 84 3 39 chr10 99339967 99340158 -46249130 - AluSp SINE Alu -14 299 103 2221 83 3 10 chr10 99340158 99340458 -46248830 - AluY SINE Alu -13 298 1 2368 71 0 3 chr10 99340458 99340755 -46248533 - AluY SINE Alu -15 296 1 2162 84 3 39 chr10 99340755 99340872 -46248416 - AluSp SINE Alu -208 105 1 1976 122 14 0 chr10 99340883 99341171 -46248117 - AluSx SINE Alu -20 292 1 1950 152 0 13 chr10 99341248 99341564 -46247724 + AluJo SINE Alu 1 312 0 342 263 32 11 chr10 99341594 99341689 -46247599 + MER3 DNA MER1_type 1 97 -112 1688 160 34 7 chr10 99341706 99342000 -46247288 - AluSx SINE Alu -9 303 2 1088 110 6 29 chr10 99342019 99342192 -46247096 - FRAM SINE Alu -12 164 1 2022 106 0 3 chr10 99342221 99342503 -46246785 - AluSx SINE Alu -31 281 1 255 139 0 0 chr10 99342512 99342555 -46246733 + MER3 DNA MER1_type 157 199 -10 231 245 0 0 chr10 99342522 99342575 -46246713 - MER3 DNA MER1_type -119 90 38 * 1371 128 113 38 chr10 99342664 99342769 -46246519 + AluJo SINE Alu 9 105 -207 1853 132 0 14 chr10 99342769 99343050 -46246238 + AluSx SINE Alu 3 279 -33 189 0 0 0 chr10 99343052 99343073 -46246215 + (CAA)n Simple_repeat Simple_repeat 1 21 0 1371 128 113 38 chr10 99343073 99343230 -46246058 + AluJo SINE Alu 105 294 -18 2029 109 13 10 chr10 99343230 99343534 -46245754 + AluSq SINE Alu 9 313 0 495 48 0 0 chr10 99344020 99344082 -46245206 + (TCCA)n Simple_repeat Simple_repeat 2 63 0 1731 128 73 10 chr10 99344887 99345176 -46244112 - AluJo SINE Alu -5 307 1 344 245 206 8 chr10 99346125 99346386 -46242902 - L2 LINE L2 -226 3087 2775 2278 93 3 0 chr10 99346386 99346687 -46242601 - AluSp SINE Alu -11 302 1 1006 161 6 0 chr10 99346691 99346853 -46242435 - AluJo/FRAM SINE Alu -16 296 134 2277 91 0 0 chr10 99346853 99347150 -46242138 - AluSx SINE Alu -15 297 1 630 233 344 25 chr10 99347154 99347325 -46241963 + L2 LINE L2 2896 3011 -302 1892 126 40 7 chr10 99347325 99347626 -46241662 - AluSq SINE Alu -2 311 1 1549 161 103 0 chr10 99347626 99347899 -46241389 - AluJo SINE Alu -11 301 1 630 233 344 25 chr10 99347899 99348043 -46241245 + L2 LINE L2 3010 3313 0 196 224 245 10 chr10 99348041 99348139 -46241149 + MIR SINE MIR 11 131 -131 * 1631 179 0 23 chr10 99348242 99348380 -46240908 + AluJo SINE Alu 1 141 -171 2148 127 0 0 chr10 99348380 99348680 -46240608 + AluSx SINE Alu 3 302 -10 1631 179 0 23 chr10 99348680 99348843 -46240445 + AluJo SINE Alu 141 295 -17 2153 111 0 0 chr10 99348843 99349141 -46240147 + AluSg SINE Alu 1 298 -12 771 170 50 0 chr10 99349738 99349897 -46239391 + L1MB5 LINE L1 5945 6111 -63 1419 143 0 5 chr10 99349904 99350127 -46239161 - AluJb SINE Alu -4 308 87 1969 98 62 0 chr10 99350150 99350425 -46238863 - AluSc SINE Alu -17 292 1 1577 136 0 139 chr10 99350439 99350799 -46238489 + AluJo SINE Alu 3 312 0 614 151 0 108 chr10 99350848 99350987 -46238301 - FLAM_C SINE Alu -9 134 11 2145 83 28 17 chr10 99351006 99351296 -46237992 - AluSg SINE Alu -17 293 1 2205 100 3 7 chr10 99351298 99351599 -46237689 - AluSx SINE Alu -12 300 1 234 337 24 0 chr10 99351844 99351927 -46237361 + L2 LINE L2 2671 2755 -559 215 238 127 0 chr10 99352180 99352243 -46237045 + MIR SINE MIR 6 76 -186 1909 140 0 52 chr10 99354268 99354467 -46234821 - AluJo SINE Alu 0 312 135 2291 106 0 3 chr10 99354467 99354779 -46234509 + AluSx SINE Alu 1 311 -1 1909 140 0 52 chr10 99354779 99354908 -46234380 - AluJo SINE Alu -177 135 1 307 225 287 23 chr10 99356216 99356345 -46232943 + MIR SINE MIR 99 261 -1 1330 119 40 40 chr10 99356416 99356643 -46232645 - AluSg/x SINE Alu -10 302 76 2200 90 10 0 chr10 99356686 99356974 -46232314 - AluSx SINE Alu -21 291 1 279 303 110 43 chr10 99357144 99357398 -46231890 + L2 LINE L2 2917 3187 -85 261 321 69 0 chr10 99357424 99357557 -46231731 + MIR SINE MIR 13 162 -46 238 175 206 0 chr10 99358196 99358259 -46231029 - MIR SINE MIR -124 138 63 2193 109 0 6 chr10 99358356 99358668 -46230620 + AluSx SINE Alu 1 310 -2 2198 95 7 3 chr10 99358679 99358983 -46230305 + AluSg SINE Alu 1 305 -5 210 128 0 0 chr10 99358998 99359037 -46230251 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1446 201 40 4 chr10 99359195 99359473 -46229815 - AluSq SINE Alu -15 288 1 712 214 0 0 chr10 99359590 99359716 -46229572 - FLAM_A SINE Alu -7 126 1 2165 118 0 6 chr10 99360126 99360439 -46228849 + AluSx SINE Alu 1 311 -1 1195 126 16 182 chr10 99360470 99360559 -46228729 + L1MB3 LINE L1 5864 5966 -217 261 0 0 0 chr10 99360559 99360588 -46228700 + (TTA)n Simple_repeat Simple_repeat 2 30 0 1900 131 0 0 chr10 99360594 99360869 -46228419 - AluSx SINE Alu -37 275 1 1195 126 16 182 chr10 99360869 99361029 -46228259 + L1MB3 LINE L1 5971 6156 -27 812 188 0 0 chr10 99361029 99361162 -46228126 + FLAM_C SINE Alu 1 133 0 1195 126 16 182 chr10 99361162 99361239 -46228049 + L1MB3 LINE L1 6156 6133 -50 2202 107 7 0 chr10 99361239 99361538 -46227750 - AluSx SINE Alu -11 301 1 1195 126 16 182 chr10 99361538 99361576 -46227712 + L1MB3 LINE L1 6132 6175 -8 1435 175 0 32 chr10 99361595 99361847 -46227441 + AluJo SINE Alu 38 281 -31 200 31 62 0 chr10 99361851 99361883 -46227405 + A-rich Low_complexity Low_complexity 2 35 0 2106 109 6 6 chr10 99361884 99362195 -46227093 + AluY SINE Alu 1 311 0 242 348 28 11 chr10 99362381 99362562 -46226726 + L1 LINE L1 4634 4817 -1329 320 263 90 23 chr10 99362641 99362774 -46226514 + L1 LINE L1 4912 5053 -1093 204 40 0 0 chr10 99362804 99362829 -46226459 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 1636 147 37 18 chr10 99362831 99362978 -46226310 - AluJo SINE Alu -32 280 124 1536 105 9 13 chr10 99362978 99363207 -46226081 - AluSg/x SINE Alu -16 294 67 1636 147 37 18 chr10 99363207 99363332 -46225956 - AluJo SINE Alu -188 124 3 2204 105 3 0 chr10 99363417 99363721 -46225567 + AluSx SINE Alu 1 305 -7 639 239 142 15 chr10 99363810 99364007 -46225281 - MER58B DNA MER1_type -3 338 117 1737 97 8 8 chr10 99364127 99364384 -46224904 - AluSq SINE Alu -6 307 51 1503 134 45 52 chr10 99364403 99364461 -46224827 - AluJo SINE Alu -45 267 210 915 129 0 0 chr10 99364461 99364593 -46224695 + FLAM_C SINE Alu 2 133 0 1503 134 45 52 chr10 99364593 99364803 -46224485 - AluJo SINE Alu -102 210 1 500 167 10 31 chr10 99364824 99364920 -46224368 - MER58B DNA MER1_type -239 102 9 1488 193 44 0 chr10 99365096 99365371 -46223917 + AluJb SINE Alu 14 300 -12 2188 117 0 0 chr10 99365428 99365737 -46223551 + AluSx SINE Alu 1 309 -3 2222 79 3 10 chr10 99365737 99366040 -46223248 + AluSp SINE Alu 1 301 -12 2272 95 0 3 chr10 99366302 99366608 -46222680 + AluSg SINE Alu 5 309 -1 735 164 69 13 chr10 99366877 99367036 -46222252 + MER58B DNA MER1_type 78 245 -96 332 147 80 0 chr10 99367054 99367129 -46222159 + L1MA10 LINE L1 6254 6334 0 722 167 0 0 chr10 99367129 99367243 -46222045 + FLAM_C SINE Alu 2 115 -18 328 241 51 0 chr10 99367319 99367398 -46221890 + MER58B DNA MER1_type 247 329 -12 2038 107 13 20 chr10 99367529 99367827 -46221461 - AluSx SINE Alu -16 296 1 23 0 0 0 chr10 99367838 99367861 -46221427 + AT_rich Low_complexity Low_complexity 1 23 0 189 278 148 19 chr10 99367919 99368027 -46221261 + L2 LINE L2 2922 3043 -270 2064 105 0 10 chr10 99368028 99368322 -46220966 + AluSg SINE Alu 5 295 -15 708 203 15 23 chr10 99368451 99368584 -46220704 - AluJb SINE Alu -49 263 132 334 314 10 0 chr10 99368585 99368687 -46220601 - MIR SINE MIR -69 193 91 2076 86 0 0 chr10 99368687 99368956 -46220332 + AluSx SINE Alu 44 312 0 1925 126 31 0 chr10 99369448 99369734 -46219554 - AluSx SINE Alu -1 311 17 324 253 19 46 chr10 99369738 99369847 -46219441 + MIR SINE MIR 48 159 -49 311 256 30 78 chr10 99369871 99370026 -46219262 - MIR SINE MIR -51 211 65 2207 96 3 0 chr10 99370060 99370353 -46218935 - AluSq SINE Alu -19 294 1 2164 91 7 0 chr10 99370374 99370661 -46218627 - AluSx SINE Alu -23 289 1 721 256 124 55 chr10 99370865 99371104 -46218184 + MLT1K LTR MaLR 193 465 -123 1777 182 0 7 chr10 99371104 99371406 -46217882 + AluJo SINE Alu 7 306 -6 721 256 124 55 chr10 99371406 99371513 -46217775 + MLT1K LTR MaLR 465 563 -25 2306 82 3 3 chr10 99371751 99372057 -46217231 - AluSx SINE Alu -6 306 1 181 176 34 50 chr10 99375016 99375135 -46214153 + (TCTCTG)n Simple_repeat Simple_repeat 4 120 0 2388 76 3 0 chr10 99375378 99375680 -46213608 - AluSp SINE Alu -10 303 1 471 284 19 39 chr10 99375684 99375839 -46213449 - MIR SINE MIR -65 197 46 212 236 8 79 chr10 99376415 99376542 -46212746 + (CAGGG)n Simple_repeat Simple_repeat 5 122 0 27 73 0 0 chr10 99376929 99376984 -46212304 + GC_rich Low_complexity Low_complexity 1 55 0 205 244 0 35 chr10 99377157 99377243 -46212045 + (CGGGG)n Simple_repeat Simple_repeat 2 84 0 418 199 0 0 chr10 99377395 99377483 -46211805 + MIR SINE MIR 105 191 -62 823 142 0 0 chr10 99377634 99377754 -46211534 + FLAM_C SINE Alu 6 125 -18 1340 173 56 72 chr10 99377776 99377933 -46211355 + AluJo SINE Alu 1 152 -160 2187 111 0 0 chr10 99377933 99378231 -46211057 + AluSx SINE Alu 13 310 -2 1340 173 56 72 chr10 99378231 99378379 -46210909 + AluJo SINE Alu 152 301 -11 370 287 40 10 chr10 99378412 99378513 -46210775 + L2 LINE L2 3168 3271 -42 195 100 0 0 chr10 99378931 99378961 -46210327 + (TCC)n Simple_repeat Simple_repeat 1 30 0 284 172 35 0 chr10 99379035 99379093 -46210195 - MIR SINE MIR -99 163 104 2066 101 9 28 chr10 99379187 99379505 -46209783 + AluSx SINE Alu 1 312 0 244 276 66 26 chr10 99382208 99382284 -46207004 + L2 LINE L2 3176 3254 -18 181 263 0 92 chr10 99383747 99383823 -46205465 + L2 LINE L2 3027 3095 -177 1762 176 0 7 chr10 99383848 99384143 -46205145 - AluJo SINE Alu -11 301 9 1011 118 12 19 chr10 99384514 99384675 -46204613 - L1PA7 LINE L1 -1 6153 5994 1399 103 98 9 chr10 99384680 99384894 -46204394 - AluSg SINE Alu -19 291 59 180 152 0 0 chr10 99485443 99485476 -46103812 + (TAA)n Simple_repeat Simple_repeat 2 34 0 887 199 142 8 chr10 99485524 99485791 -46103497 - AluSg SINE Alu -7 303 1 21 0 0 0 chr10 99486431 99486452 -46102836 + AT_rich Low_complexity Low_complexity 1 21 0 1633 88 26 13 chr10 99486452 99486705 -46102583 - AluSp SINE Alu 0 311 56 5402 77 8 6 chr10 99487318 99488121 -46101167 - L1P LINE L1 -3024 3122 2319 942 102 55 0 chr10 99488795 99488922 -46100366 + AluSx SINE Alu 1 134 -178 37 23 0 0 chr10 99488922 99488966 -46100322 + AT_rich Low_complexity Low_complexity 1 44 0 1363 111 11 0 chr10 99488970 99489160 -46100128 + AluSx SINE Alu 118 309 -3 1250 94 0 0 chr10 99489161 99489331 -46099957 + LTR8 LTR ERV1 522 691 0 479 183 76 15 chr10 99489332 99489463 -46099825 + L1MD1 LINE L1 6103 6241 -1 217 277 0 31 chr10 99490823 99490888 -46098400 + L3 LINE CR1 1510 1572 -5 525 271 139 45 chr10 99491848 99492338 -46096950 - L1ME4a LINE L1 -30 6091 5556 2204 87 0 48 chr10 99492341 99492653 -46096635 + AluSc SINE Alu 1 297 -12 314 330 38 53 chr10 99492690 99492954 -46096334 - L1ME4a LINE L1 -597 5524 5265 330 268 185 29 chr10 99493238 99493552 -46095736 + L2 LINE L2 2844 3206 -107 1995 134 7 16 chr10 99494760 99495067 -46094221 + AluSx SINE Alu 1 304 -8 742 221 17 6 chr10 99496480 99496661 -46092627 - LTR41 LTR ERVL -586 187 5 186 43 0 0 chr10 99497242 99497265 -46092023 + (TTC)n Simple_repeat Simple_repeat 2 24 0 22 0 0 0 chr10 99497695 99497717 -46091571 + GC_rich Low_complexity Low_complexity 1 22 0 6739 65 1 8 chr10 99497717 99498627 -46090661 - L1P LINE L1 -5242 904 1 21 57 0 0 chr10 99498637 99498672 -46090616 + AT_rich Low_complexity Low_complexity 1 35 0 1843 271 19 19 chr10 99498717 99499252 -46090036 + L1M4 LINE L1 4 538 -6004 24 32 0 0 chr10 99499536 99499567 -46089721 + AT_rich Low_complexity Low_complexity 1 31 0 605 281 134 65 chr10 99501258 99501924 -46087364 + HAL1 LINE L1 259 970 -1537 * 7177 39 16 0 chr10 99501919 99502868 -46086420 - L1P LINE L1 -3796 2350 1387 431 272 89 11 chr10 99503901 99504092 -46085196 + MLT1L LTR MaLR 26 231 -384 965 196 127 11 chr10 99504728 99504943 -46084345 + L1ME3A LINE L1 5796 6051 -119 1861 164 0 25 chr10 99504943 99505260 -46084028 - AluJo SINE Alu -3 309 1 965 196 127 11 chr10 99505260 99505320 -46083968 + L1ME3A LINE L1 6051 6103 -67 248 122 0 0 chr10 99505819 99505860 -46083428 + MLT2B3 LTR ERVL 1 41 -513 1334 281 176 21 chr10 99505996 99506710 -46082578 - L2 LINE L2 -1509 1805 981 657 76 0 0 chr10 99507477 99507569 -46081719 + (TAGA)n Simple_repeat Simple_repeat 3 94 0 36 53 0 0 chr10 99507813 99507870 -46081418 + AT_rich Low_complexity Low_complexity 1 57 0 197 80 60 20 chr10 99508358 99508408 -46080880 + GA-rich Low_complexity Low_complexity 1 52 0 1081 201 30 39 chr10 99508496 99508829 -46080459 + L1M4 LINE L1 1956 2285 -4540 25 0 0 0 chr10 99509116 99509141 -46080147 + AT_rich Low_complexity Low_complexity 1 25 0 387 214 90 0 chr10 99509405 99509494 -46079794 - MIR3 SINE MIR -36 172 76 18428 42 0 2 chr10 99509561 99512614 -46076674 - L1PA4 LINE L1 -1 6154 3101 8309 74 2 2 chr10 99512614 99513785 -46075503 + L1P LINE L1 1228 2398 -3748 310 295 67 19 chr10 99514118 99514223 -46075065 + L2 LINE L2 3200 3309 -4 452 315 74 37 chr10 99514259 99514557 -46074731 - L1M4 LINE L1 -1297 4849 4541 316 195 93 34 chr10 99514630 99514748 -46074540 + L1MC4 LINE L1 7918 8042 0 255 156 22 67 chr10 99514849 99514939 -46074349 + (TTATA)n Simple_repeat Simple_repeat 4 89 0 2063 160 0 0 chr10 99515899 99516211 -46073077 - AluJb SINE Alu 0 312 1 726 145 77 0 chr10 99516222 99516339 -46072949 - FLAM_C SINE Alu -7 126 1 25 31 0 0 chr10 99517566 99517598 -46071690 + AT_rich Low_complexity Low_complexity 1 32 0 256 240 40 0 chr10 99518764 99518864 -46070424 + L1ME4a LINE L1 5203 5306 -840 706 236 98 46 chr10 99518913 99519260 -46070028 + L1ME4a LINE L1 5469 5833 -288 294 218 45 91 chr10 99519345 99519455 -46069833 + L3 LINE CR1 1470 1574 -3 514 295 147 6 chr10 99519530 99519686 -46069602 + MER5A DNA MER1_type 9 186 -3 279 157 0 0 chr10 99520570 99520621 -46068667 + (CA)n Simple_repeat Simple_repeat 2 52 0 1180 237 151 47 chr10 99521188 99522047 -46067241 - L2 LINE L2 0 3313 2367 1426 188 208 0 chr10 99522175 99522536 -46066752 - L1P LINE L1 -2454 3692 3257 243 173 0 0 chr10 99522521 99522573 -46066715 - L1 LINE L1 -2533 3613 3562 * 9366 194 40 25 chr10 99522576 99526382 -46062906 - L1PA12 LINE L1 -2662 4922 1 216 158 0 0 chr10 99526874 99526912 -46062376 + (TA)n Simple_repeat Simple_repeat 2 39 0 242 152 0 0 chr10 99526924 99526970 -46062318 + L1MC4 LINE L1 6658 6703 -1339 444 208 228 0 chr10 99527305 99527454 -46061834 - MER5A DNA MER1_type 0 189 7 655 267 0 53 chr10 99527464 99527651 -46061637 - MER5B DNA MER1_type -1 177 1 804 27 0 36 chr10 99528326 99528437 -46060851 - L1PA3 LINE L1 0 6155 6049 810 120 75 5 chr10 99528439 99528639 -46060649 + L1P LINE L1 20 233 -5913 575 170 18 70 chr10 99528945 99529116 -46060172 - MLT1E2 LTR MaLR -464 162 1 309 256 95 113 chr10 99529119 99529393 -46059895 + L2 LINE L2 3045 3313 0 342 231 55 0 chr10 99529887 99529994 -46059294 - MIR SINE MIR -17 191 71 3166 150 34 4 chr10 99530396 99530930 -46058358 + MER44D DNA MER2_type 1 605 0 454 340 57 0 chr10 99531417 99531576 -46057712 - MIR3 SINE MIR -7 201 34 1808 202 28 3 chr10 99531599 99531955 -46057333 + MLT1A1 LTR MaLR 1 365 0 471 322 116 34 chr10 99532504 99532824 -46056464 - L2 LINE L2 0 3272 2927 730 275 111 8 chr10 99532845 99533089 -46056199 + L2 LINE L2 1116 1384 -1930 21 0 0 0 chr10 99533426 99533447 -46055841 + AT_rich Low_complexity Low_complexity 1 21 0 742 160 58 11 chr10 99533609 99533797 -46055491 - L1P LINE L1 -5872 274 78 2321 106 13 0 chr10 99534664 99534967 -46054321 + AluSx SINE Alu 1 307 -5 291 281 61 0 chr10 99535431 99535513 -46053775 + L2 LINE L2 3186 3272 0 711 248 30 81 chr10 99536294 99536589 -46052699 + MLT1H1 LTR MaLR 24 303 -252 580 248 8 8 chr10 99536603 99536728 -46052560 + AluJb SINE Alu 2 126 -186 189 74 0 0 chr10 99536735 99536762 -46052526 + (A)n Simple_repeat Simple_repeat 1 27 0 689 215 168 0 chr10 99536764 99536978 -46052310 + MLT1H1 LTR MaLR 287 536 -6 2176 118 13 0 chr10 99537146 99537452 -46051836 + AluSx SINE Alu 1 310 -2 456 267 203 5 chr10 99538547 99538734 -46050554 + MIR SINE MIR 27 250 -12 222 321 54 0 chr10 99539112 99539168 -46050120 - MER91 DNA MER1_type -2 138 80 387 0 0 0 chr10 99539801 99539844 -46049444 + (TA)n Simple_repeat Simple_repeat 1 43 0 693 179 16 53 chr10 99540431 99540621 -46048667 - MER20 DNA MER1_type -7 212 30 268 328 43 16 chr10 99542464 99542600 -46046688 + MER5B DNA MER1_type 20 173 -16 753 160 0 8 chr10 99542820 99542945 -46046343 - FLAM_C SINE Alu -19 124 1 1983 180 54 7 chr10 99543355 99543760 -46045528 + MSTA LTR MaLR 5 428 0 703 244 51 108 chr10 99544458 99544912 -46044376 + Charlie7 DNA MER1_type 1 428 -2184 916 234 74 4 chr10 99544940 99545197 -46044091 + L1MC5 LINE L1 5318 5592 -2216 1539 196 50 138 chr10 99545202 99546057 -46043231 + L1MC5 LINE L1 6788 7567 -394 1506 221 57 19 chr10 99546057 99546424 -46042864 - MSTD LTR MaLR 0 396 16 689 208 86 57 chr10 99546477 99546756 -46042532 + L1MC5 LINE L1 7611 7897 -64 593 248 142 13 chr10 99546778 99547080 -46042208 + Charlie7 DNA MER1_type 397 737 -1875 1821 271 46 10 chr10 99547089 99547671 -46041617 + L1MEc LINE L1 37 639 -5757 1077 134 5 41 chr10 99547671 99547865 -46041423 - MER20 DNA MER1_type 0 219 33 1614 223 29 6 chr10 99547883 99548362 -46040926 + L1MEc LINE L1 638 1127 -5269 1752 123 0 0 chr10 99548405 99548640 -46040648 + AluSc SINE Alu 1 235 -74 774 270 66 13 chr10 99548832 99549058 -46040230 - MIR SINE MIR 0 262 25 750 151 0 36 chr10 99549262 99549401 -46039887 + AluSg/x SINE Alu 173 306 -6 266 310 62 47 chr10 99550322 99550451 -46038837 - L2 LINE L2 -38 3234 3104 254 150 138 50 chr10 99550640 99550720 -46038568 + L1ME3A LINE L1 6084 6170 0 2031 130 21 13 chr10 99550977 99551101 -46038187 + L1MA5 LINE L1 5921 6043 -257 2015 112 0 0 chr10 99551101 99551360 -46037928 + AluSx SINE Alu 39 297 -15 2031 130 21 13 chr10 99551360 99551612 -46037676 + L1MA5 LINE L1 6043 6300 0 549 173 15 8 chr10 99552094 99552227 -46037061 - MER53 DNA DNA -19 170 37 14153 31 1 1 chr10 99552389 99554838 -46034450 - L1PA3 LINE L1 0 6155 3691 4631 22 40 0 chr10 99554838 99555342 -46033946 - SVA Other Other -3 1383 860 7304 31 19 0 chr10 99555492 99557038 -46032250 - L1PA4 LINE L1 0 6155 4616 198 228 0 14 chr10 99557275 99557341 -46031947 + MIR SINE MIR 106 170 -38 659 113 350 23 chr10 99557951 99558128 -46031160 + MER46A DNA MER2_type 2 236 0 2102 171 50 2 chr10 99558234 99558672 -46030616 - L1MB7 LINE L1 -74 6608 6150 1370 190 19 15 chr10 99558675 99558938 -46030350 + Tigger7 DNA MER2_type 1 264 -2223 495 140 20 40 chr10 99558940 99559040 -46030248 + Tigger7 DNA MER2_type 2390 2487 0 1502 183 80 27 chr10 99559051 99559605 -46029683 - L1MB7 LINE L1 -529 6143 5563 * 2485 227 57 21 chr10 99559603 99560410 -46028878 - L1MB7 LINE L1 -4712 1934 1099 24 53 0 0 chr10 99560465 99560503 -46028785 + AT_rich Low_complexity Low_complexity 1 38 0 1198 157 5 5 chr10 99560503 99560713 -46028575 - MER2 DNA MER2_type -135 210 1 3859 216 67 30 chr10 99560713 99561754 -46027534 - L1MB7 LINE L1 -5455 1091 5 191 320 40 30 chr10 99561872 99561972 -46027316 - L2 LINE L2 -60 3253 3153 252 152 0 0 chr10 99562210 99562256 -46027032 - L1M4 LINE L1 -872 5274 5229 252 0 0 0 chr10 99562256 99562284 -46027004 + (CA)n Simple_repeat Simple_repeat 2 29 0 914 197 11 6 chr10 99562498 99562676 -46026612 + MER58A DNA MER1_type 20 198 -26 1129 151 20 5 chr10 99563104 99563303 -46025985 + L1PA15 LINE L1 5956 6157 -8 28 0 0 0 chr10 99564823 99564851 -46024437 + AT_rich Low_complexity Low_complexity 1 28 0 2250 100 3 0 chr10 99569293 99569583 -46019705 + AluSx SINE Alu 1 291 -21 29 0 0 0 chr10 99570359 99570388 -46018900 + AT_rich Low_complexity Low_complexity 1 29 0 374 233 116 20 chr10 99571989 99572135 -46017153 - MLT1J2 LTR MaLR -290 160 1 7717 36 12 3 chr10 99573651 99574541 -46014747 + L1PA5 LINE L1 5254 6151 -3 224 59 29 0 chr10 99574544 99574578 -46014710 + (TAA)n Simple_repeat Simple_repeat 3 37 0 180 0 0 0 chr10 99576318 99576338 -46012950 + (A)n Simple_repeat Simple_repeat 1 20 0 569 330 14 5 chr10 99577679 99577900 -46011388 - L2 LINE L2 -571 2743 2521 6071 38 4 0 chr10 99578360 99579092 -46010196 - L1PA13 LINE L1 -2234 3912 3178 9125 137 8 1 chr10 99579092 99581342 -46007946 + L1PA13 LINE L1 3915 6157 -6 411 282 32 25 chr10 99581606 99581749 -46007539 + MER5B DNA MER1_type 10 163 -26 378 61 0 0 chr10 99581816 99581865 -46007423 - MADE1 DNA Mariner 0 80 32 459 213 72 68 chr10 99581924 99582001 -46007287 - HAL1 LINE L1 -3 2504 2429 1976 167 3 0 chr10 99582001 99582312 -46006976 + AluJb SINE Alu 1 312 0 459 213 72 68 chr10 99582312 99582455 -46006833 - HAL1 LINE L1 -78 2429 2283 30067 52 2 2 chr10 99582638 99586331 -46002957 + L1P LINE L1 11 3700 -2446 252 0 0 0 chr10 99586331 99586359 -46002929 + (CCCCCT)n Simple_repeat Simple_repeat 6 33 0 5006 84 53 56 chr10 99586363 99587197 -46002091 + SVA Other Other 38 868 -518 249 342 54 16 chr10 99588016 99588200 -46001088 - L2 LINE L2 -936 2378 2188 23 0 0 0 chr10 99588961 99588984 -46000304 + AT_rich Low_complexity Low_complexity 1 23 0 1227 141 16 42 chr10 99589037 99589228 -46000060 + MER5A DNA MER1_type 4 189 0 334 223 262 0 chr10 99589515 99589618 -45999670 - MIR SINE MIR -113 149 20 22 0 0 0 chr10 99589634 99589656 -45999632 + AT_rich Low_complexity Low_complexity 1 22 0 269 31 0 172 chr10 99589751 99589815 -45999473 + L1MB4 LINE L1 6128 6180 0 376 271 39 23 chr10 99589815 99589944 -45999344 - MER5B DNA MER1_type -27 151 21 820 277 156 16 chr10 99590061 99590426 -45998862 - L2 LINE L2 -6 3307 2892 356 301 0 45 chr10 99590424 99590557 -45998731 - L2 LINE L2 -676 2638 2512 * 476 82 22 52 chr10 99590884 99591018 -45998270 + (TA)n Simple_repeat Simple_repeat 2 131 0 27 62 0 0 chr10 99591386 99591434 -45997854 + AT_rich Low_complexity Low_complexity 1 48 0 225 0 0 0 chr10 99591984 99592009 -45997279 + (A)n Simple_repeat Simple_repeat 1 25 0 23 0 0 0 chr10 99592772 99592795 -45996493 + AT_rich Low_complexity Low_complexity 1 23 0 279 245 0 0 chr10 99592804 99592857 -45996431 - L2 LINE L2 -36 3236 3184 342 351 110 10 chr10 99592941 99593314 -45995974 + L2 LINE L2 2175 2637 -677 793 208 16 73 chr10 99594460 99594652 -45994636 + MER5A DNA MER1_type 9 189 0 228 298 75 0 chr10 99594764 99594858 -45994430 - MIR SINE MIR -14 248 148 522 288 43 42 chr10 99594864 99595142 -45994146 - L2 LINE L2 -10 3303 2959 221 264 287 0 chr10 99595142 99595229 -45994059 - MIR SINE MIR -115 147 36 21 57 0 0 chr10 99595319 99595354 -45993934 + AT_rich Low_complexity Low_complexity 1 35 0 183 162 0 0 chr10 99596197 99596234 -45993054 + (TA)n Simple_repeat Simple_repeat 2 38 0 1751 138 3 58 chr10 99596305 99596616 -45992672 - AluJb SINE Alu -18 294 1 878 127 0 8 chr10 99596618 99596744 -45992544 - AluJo/FLAM SINE Alu -187 125 1 3098 227 223 76 chr10 99596984 99598881 -45990407 - L2 LINE L2 -145 3168 993 26 0 0 0 chr10 99599102 99599128 -45990160 + AT_rich Low_complexity Low_complexity 1 26 0 602 206 206 42 chr10 99600387 99600601 -45988687 - MIR SINE MIR -11 251 3 356 257 29 29 chr10 99600883 99600988 -45988300 - MER5B DNA MER1_type -73 105 1 1748 146 0 34 chr10 99601144 99601271 -45988017 + AluJo SINE Alu 26 156 -156 2702 109 5 19 chr10 99601271 99601639 -45987649 + THE1B LTR MaLR 2 364 0 1748 146 0 34 chr10 99601639 99601806 -45987482 + AluJo SINE Alu 156 310 -2 227 377 39 7 chr10 99601862 99602016 -45987272 + MIR SINE MIR 4 162 -100 352 267 84 79 chr10 99602742 99602944 -45986344 + MIR SINE MIR 49 251 -11 2296 95 0 3 chr10 99603159 99603454 -45985834 + AluSx SINE Alu 2 295 -17 1409 151 83 0 chr10 99603644 99603936 -45985352 - MER33 DNA MER1_type -13 311 1 345 100 0 0 chr10 99604279 99604329 -45984959 + (T)n Simple_repeat Simple_repeat 1 50 0 396 238 174 117 chr10 99604718 99604999 -45984289 + L2 LINE L2 3017 3313 0 1724 226 96 37 chr10 99606762 99607272 -45982016 - MLT1H LTR MaLR -8 541 2 465 19 0 0 chr10 99608310 99608364 -45980924 + (TA)n Simple_repeat Simple_repeat 1 54 0 186 43 0 0 chr10 99609430 99609453 -45979835 + (T)n Simple_repeat Simple_repeat 1 23 0 311 209 52 52 chr10 99610244 99610359 -45978929 - AluSp SINE Alu -188 115 1 247 267 59 50 chr10 99610378 99610479 -45978809 - MIR3 SINE MIR -25 183 82 721 224 139 6 chr10 99610864 99611029 -45978259 + MER5A DNA MER1_type 3 189 0 1229 168 34 5 chr10 99611081 99611290 -45977998 + MER20 DNA MER1_type 1 215 -4 25 51 0 0 chr10 99611387 99611426 -45977862 + AT_rich Low_complexity Low_complexity 1 39 0 998 224 118 48 chr10 99611602 99611932 -45977356 - L1MC4 LINE L1 0 8042 7690 285 260 52 0 chr10 99611939 99612016 -45977272 + HAL1 LINE L1 48 128 -2379 180 349 63 0 chr10 99612020 99612083 -45977205 + L2 LINE L2 3241 3307 -6 496 150 442 14 chr10 99612442 99612589 -45976699 + HAL1 LINE L1 1657 1866 -641 794 187 107 40 chr10 99612595 99612909 -45976379 + Charlie5 DNA MER1_type 2 2584 -28 4646 245 46 25 chr10 99612952 99614493 -45974795 - L2 LINE L2 -2 3311 1743 200 294 59 15 chr10 99615230 99615298 -45973990 + L2 LINE L2 3141 3211 -61 267 312 7 28 chr10 99615772 99615913 -45973375 + CT-rich Low_complexity Low_complexity 5 142 0 205 309 0 12 chr10 99616018 99616099 -45973189 + CT-rich Low_complexity Low_complexity 3 82 0 1972 203 13 20 chr10 99616302 99616692 -45972596 - MLT1B LTR MaLR -3 387 1 507 271 105 6 chr10 99616704 99616885 -45972403 + MIR SINE MIR 38 236 -26 633 311 107 38 chr10 99617459 99618103 -45971185 - L2 LINE L2 -17 3255 2566 216 291 17 60 chr10 99620078 99620195 -45969093 + MIR3 SINE MIR 2 113 -95 450 204 23 0 chr10 99620909 99620997 -45968291 + Zaphod DNA AcHobo 3942 4031 0 192 300 0 0 chr10 99621052 99621102 -45968186 - L2 LINE L2 -9 3304 3255 406 268 106 16 chr10 99621516 99621639 -45967649 + L2 LINE L2 3138 3271 -1 501 263 137 43 chr10 99621996 99622472 -45966816 + L1MC4a LINE L1 5589 6106 -15 517 283 7 20 chr10 99622498 99622650 -45966638 + L2 LINE L2 3158 3307 -6 198 0 0 0 chr10 99624195 99624217 -45965071 + (A)n Simple_repeat Simple_repeat 1 22 0 387 266 121 0 chr10 99624457 99624581 -45964707 + MIR SINE MIR 14 152 -110 2891 106 22 2 chr10 99624624 99625038 -45964250 + L1MA3 LINE L1 5884 6305 0 315 316 9 9 chr10 99625435 99625549 -45963739 - MER81 DNA DNA 0 114 1 332 257 101 50 chr10 99626671 99626850 -45962438 + MIR3 SINE MIR 21 208 0 452 247 120 27 chr10 99627108 99627258 -45962030 - MER5B DNA MER1_type -13 165 2 853 163 169 0 chr10 99627269 99627429 -45961859 + MER5A DNA MER1_type 3 189 0 231 36 0 0 chr10 99628167 99628195 -45961093 + (TC)n Simple_repeat Simple_repeat 2 29 0 2035 181 92 51 chr10 99628333 99628363 -45960925 - MLT2B3 LTR ERVL -8 546 519 360 0 0 0 chr10 99628363 99628403 -45960885 + (TG)n Simple_repeat Simple_repeat 2 41 0 2035 181 92 51 chr10 99628403 99628424 -45960864 - MLT2B3 LTR ERVL -35 519 500 428 0 19 0 chr10 99628424 99628476 -45960812 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 2035 181 92 51 chr10 99628476 99628892 -45960396 - MLT2B3 LTR ERVL -54 500 59 2371 65 269 0 chr10 99628909 99629262 -45960026 - LTR7 LTR ERV1 -2 448 1 2065 130 79 14 chr10 99629262 99629630 -45959658 - HERVH LTR ERV1 0 7713 7322 1453 113 17 30 chr10 99629614 99629844 -45959444 - HERVH LTR ERV1 -1887 5826 5600 * 10213 113 45 41 chr10 99629845 99631496 -45957792 - HERVH LTR ERV1 -2564 5149 3492 955 132 6 19 chr10 99631486 99631645 -45957643 - HERVH LTR ERV1 -4423 3290 3134 * 1197 133 0 10 chr10 99631621 99631817 -45957471 - HERVH LTR ERV1 -4718 2995 2802 630 125 0 0 chr10 99631983 99632071 -45957217 + AluSc SINE Alu 137 224 -85 4655 79 40 13 chr10 99632072 99632691 -45956597 + L1PA8A LINE L1 5496 6131 0 2556 186 69 7 chr10 99632691 99633229 -45956059 + L1MB7 LINE L1 5598 6168 -16 382 311 61 6 chr10 99633497 99633677 -45955611 - L1MC/D LINE L1 -2000 5808 5619 425 256 68 15 chr10 99633707 99633840 -45955448 + MIR3 SINE MIR 3 142 -66 242 331 21 28 chr10 99634595 99634740 -45954548 - MLT1K LTR MaLR -13 575 432 211 273 106 0 chr10 99634775 99634841 -45954447 + L2 LINE L2 3221 3293 -20 21 36 0 0 chr10 99635030 99635058 -45954230 + AT_rich Low_complexity Low_complexity 1 28 0 1633 121 67 4 chr10 99635074 99635353 -45953935 - AluSx SINE Alu 0 321 28 232 214 18 0 chr10 99635733 99635789 -45953499 - L1MA10 LINE L1 -14 6320 6264 930 162 0 14 chr10 99635799 99635947 -45953341 + FAM SINE Alu 10 155 -30 256 163 41 0 chr10 99636037 99636086 -45953202 + MER58 DNA MER1_type 2355 2405 -15 2587 148 38 14 chr10 99637247 99637624 -45951664 + MSTA LTR MaLR 1 368 -60 222 62 0 0 chr10 99637624 99637656 -45951632 + (TCTG)n Simple_repeat Simple_repeat 2 33 0 1720 171 24 10 chr10 99637656 99637949 -45951339 - AluJb SINE Alu -15 297 1 2587 148 38 14 chr10 99637949 99637988 -45951300 + MSTA LTR MaLR 367 428 0 189 0 0 0 chr10 99638672 99638693 -45950595 + (A)n Simple_repeat Simple_repeat 1 21 0 227 341 80 35 chr10 99638693 99638919 -45950369 + L1MEd LINE L1 331 566 -5553 978 174 0 0 chr10 99638928 99639089 -45950199 + FRAM SINE Alu 1 157 -19 2126 113 3 3 chr10 99639102 99639393 -45949895 + AluSx SINE Alu 10 300 -12 1860 139 49 7 chr10 99639395 99639709 -45949579 + AluSx SINE Alu 1 312 0 1886 122 35 14 chr10 99639712 99640000 -45949288 + AluJb SINE Alu 1 294 -18 614 213 153 63 chr10 99640132 99640289 -45948999 + L1MEd LINE L1 691 833 -5286 2073 138 58 9 chr10 99640289 99640614 -45948674 + MER61A LTR ERV1 1 341 -2 614 213 153 63 chr10 99640614 99640836 -45948452 + L1MEd LINE L1 833 1104 -5015 328 158 0 0 chr10 99640881 99640938 -45948350 - MER92C LTR ERV1 -2 552 496 601 233 57 66 chr10 99640963 99641191 -45948097 - MER92C LTR ERV1 -328 226 1 327 356 50 12 chr10 99641191 99641351 -45947937 + HAL1 LINE L1 1231 1396 -1111 412 181 105 19 chr10 99642179 99642284 -45947004 - L2 LINE L2 -4 3268 3155 5582 119 17 3 chr10 99643371 99644143 -45945145 + LTR39 LTR ERV1 1 783 0 2016 143 60 30 chr10 99644609 99644973 -45944315 - THE1C LTR MaLR 0 375 1 476 353 6 6 chr10 99645487 99645660 -45943628 - MIR SINE MIR -82 180 8 2226 148 9 32 chr10 99645943 99646288 -45943000 - MER1B DNA MER1_type 0 337 1 594 245 69 25 chr10 99646698 99646902 -45942386 + LTR7 LTR ERV1 238 450 0 367 128 105 12 chr10 99647281 99647367 -45941921 + L1MD3 LINE L1 6480 6573 -1422 2355 250 72 15 chr10 99647375 99648107 -45941181 + L1MC4 LINE L1 7269 8042 0 355 109 156 0 chr10 99648171 99648235 -45941053 - MLT1D LTR MaLR -5 500 427 516 204 175 0 chr10 99648235 99648372 -45940916 - MLT1D LTR MaLR -181 324 164 1430 185 85 38 chr10 99648387 99648409 -45940879 - MLT1B LTR MaLR -34 356 336 2428 129 3 12 chr10 99648409 99648749 -45940539 + MER1B DNA MER1_type 1 337 0 1430 185 85 38 chr10 99648749 99649066 -45940222 - MLT1B LTR MaLR -54 336 1 467 275 86 77 chr10 99649696 99650045 -45939243 + MLT1K LTR MaLR 229 580 -8 1205 215 136 15 chr10 99650582 99650921 -45938367 - MLT1F1 LTR MaLR 0 567 188 201 94 0 0 chr10 99650921 99650953 -45938335 + (GA)n Simple_repeat Simple_repeat 2 33 0 1058 179 24 33 chr10 99650975 99651187 -45938101 + MER20 DNA MER1_type 10 219 0 449 288 113 0 chr10 99651211 99651371 -45937917 - MIR SINE MIR -51 211 34 2164 138 0 0 chr10 99652047 99652358 -45936930 - AluSx SINE Alu -1 311 1 252 0 0 0 chr10 99652429 99652457 -45936831 + (A)n Simple_repeat Simple_repeat 1 28 0 501 245 86 61 chr10 99653228 99653285 -45936003 + MER112 DNA MER1_type 5 59 -197 378 0 0 0 chr10 99653285 99653327 -45935961 + (CA)n Simple_repeat Simple_repeat 2 43 0 501 245 86 61 chr10 99653327 99653514 -45935774 + MER112 DNA MER1_type 59 255 -1 538 191 71 94 chr10 99654256 99654565 -45934723 - L1MC5 LINE L1 -182 7779 7478 2744 84 35 24 chr10 99655154 99655525 -45933763 + THE1C LTR MaLR 1 375 0 238 289 0 0 chr10 99655618 99655708 -45933580 - L1MC4 LINE L1 -1339 6703 6614 2188 134 0 0 chr10 99655723 99656015 -45933273 - AluSx SINE Alu -20 292 1 481 233 19 31 chr10 99656204 99656220 -45933068 - L1MA10 LINE L1 -2 6332 6317 3593 181 69 37 chr10 99656220 99657144 -45932144 - L1ME2 LINE L1 -9 6155 5209 940 262 75 21 chr10 99657150 99657535 -45931753 - L1MEc LINE L1 -4416 1980 1575 426 207 72 88 chr10 99657758 99657779 -45931509 - L1MEc LINE L1 -5306 899 879 378 0 0 0 chr10 99657779 99657821 -45931467 + (TA)n Simple_repeat Simple_repeat 2 43 0 426 207 72 88 chr10 99657821 99658092 -45931196 - L1MEc LINE L1 -5326 879 585 958 315 41 12 chr10 99658352 99658771 -45930517 - L1MEc LINE L1 -5929 467 37 1955 138 0 24 chr10 99658801 99659092 -45930196 + AluSx SINE Alu 1 284 -28 291 309 60 47 chr10 99659536 99659685 -45929603 - MIR SINE MIR -67 195 45 1024 251 40 8 chr10 99659953 99660200 -45929088 - MIR SINE MIR 0 262 8 225 283 51 21 chr10 99660215 99660336 -45928952 - MIR3 SINE MIR -47 161 72 462 260 8 16 chr10 99660537 99660660 -45928628 - L2 LINE L2 -5 3308 3187 1267 293 68 12 chr10 99661972 99662398 -45926890 + LTR16A LTR ERVL 1 450 0 198 209 0 0 chr10 99662692 99662735 -45926553 + (CAT)n Simple_repeat Simple_repeat 3 45 0 5864 49 7 1 chr10 99663554 99664308 -45924980 - L1P LINE L1 -3038 3108 2351 2122 124 10 0 chr10 99666094 99666393 -45922895 + AluSg SINE Alu 1 302 -8 411 312 43 0 chr10 99666716 99666854 -45922434 - MIR3 SINE MIR -21 187 44 2243 103 0 0 chr10 99666935 99667227 -45922061 + AluSq SINE Alu 1 292 -21 2332 75 3 7 chr10 99667690 99667982 -45921306 + AluY SINE Alu 1 291 -20 286 314 145 65 chr10 99668248 99669003 -45920285 + L2 LINE L2 2456 3272 0 652 215 168 38 chr10 99670649 99670698 -45918590 - MLT1C LTR MaLR -231 236 195 1858 161 20 26 chr10 99670698 99671002 -45918286 - AluJb SINE Alu -10 302 1 652 215 168 38 chr10 99671002 99671161 -45918127 - MLT1C LTR MaLR -272 195 1 2132 80 6 70 chr10 99671237 99671549 -45917739 + AluSp SINE Alu 1 292 -21 217 245 0 0 chr10 99671655 99671704 -45917584 + (CATATA)n Simple_repeat Simple_repeat 5 53 0 592 315 20 36 chr10 99672859 99673110 -45916178 - MIR SINE MIR -2 260 14 234 356 43 37 chr10 99673154 99673317 -45915971 + L2 LINE L2 2813 2976 -337 194 367 17 0 chr10 99673975 99674035 -45915253 - L2 LINE L2 -3 3310 3250 2681 10 0 0 chr10 99675257 99675546 -45913742 - AluYb8 SINE Alu -29 289 1 817 176 46 8 chr10 99675563 99675694 -45913594 - AluJo SINE Alu -175 137 2 289 103 121 17 chr10 99676509 99676567 -45912721 + MER5A DNA MER1_type 19 82 -107 3175 216 96 54 chr10 99676680 99677702 -45911586 + L1MC4 LINE L1 6972 8036 -6 1073 253 113 16 chr10 99677936 99678300 -45910988 - L2 LINE L2 -32 3281 2883 317 309 64 0 chr10 99678797 99678891 -45910397 + L2 LINE L2 3201 3300 -13 701 157 17 0 chr10 99678977 99679092 -45910196 - AluSg/x SINE Alu -6 306 190 1503 117 0 48 chr10 99679093 99679324 -45909964 - AluSq SINE Alu -93 220 1 180 0 0 0 chr10 99679710 99679730 -45909558 + (TG)n Simple_repeat Simple_repeat 2 21 0 232 338 15 0 chr10 99680510 99680578 -45908710 - L2 LINE L2 -58 3255 3187 256 220 0 0 chr10 99680736 99680786 -45908502 - L3 LINE CR1 -48 1529 1480 1644 201 71 49 chr10 99681341 99681793 -45907495 - LTR37B LTR ERV1 0 468 7 602 277 11 0 chr10 99682461 99682638 -45906650 - MIR SINE MIR 0 262 84 275 281 0 0 chr10 99682711 99682768 -45906520 - MIR SINE MIR -201 61 5 636 315 70 17 chr10 99682820 99683061 -45906227 - MIR SINE MIR -10 252 4 1253 175 84 29 chr10 99683551 99683911 -45905377 + MSTC LTR MaLR 4 428 0 310 289 0 0 chr10 99684160 99684250 -45905038 - MIR SINE MIR -56 206 117 1473 284 69 17 chr10 99684749 99685214 -45904074 + LTR16C LTR ERVL 1 489 -2 302 291 12 12 chr10 99685236 99685322 -45903966 + MIR3 SINE MIR 120 205 -3 930 215 185 13 chr10 99685499 99685801 -45903487 + LTR16A LTR ERVL 97 450 0 435 277 145 28 chr10 99686540 99686882 -45902406 - L2 LINE L2 -232 3081 2711 576 244 104 16 chr10 99686894 99687087 -45902201 + L2 LINE L2 3103 3312 -1 282 335 79 7 chr10 99687423 99687575 -45901713 + MIR SINE MIR 81 243 -19 542 190 28 69 chr10 99687748 99687945 -45901343 + MLT1F1 LTR MaLR 389 567 0 222 308 132 11 chr10 99688070 99688161 -45901127 + L2 LINE L2 3142 3243 -29 428 264 125 68 chr10 99688290 99688570 -45900718 - L2 LINE L2 -97 3216 2921 413 302 42 42 chr10 99689061 99689253 -45900035 + LTR16C LTR ERVL 300 491 0 557 135 33 7 chr10 99689286 99689510 -45899778 + AluJ SINE Alu 1 278 -34 207 0 0 0 chr10 99689512 99689535 -45899753 + (TC)n Simple_repeat Simple_repeat 2 24 0 285 146 0 0 chr10 99689535 99689583 -45899705 + (TA)n Simple_repeat Simple_repeat 2 49 0 1152 228 162 20 chr10 99689795 99690246 -45899042 + L2 LINE L2 1210 1724 -1590 2410 238 76 41 chr10 99690248 99690388 -45898900 + L2 LINE L2 2141 2275 -997 2354 178 42 32 chr10 99690388 99690888 -45898400 - MLT1D LTR MaLR 0 505 1 2410 238 76 41 chr10 99690888 99691589 -45897699 + L2 LINE L2 2275 3008 -264 1512 261 76 17 chr10 99691590 99692061 -45897227 - MLT1E2 LTR MaLR -4 622 124 1674 265 145 25 chr10 99742552 99743268 -45846020 + L2 LINE L2 1123 1924 -1390 216 269 28 28 chr10 99743372 99743513 -45845775 + (GGGTG)n Simple_repeat Simple_repeat 4 144 0 316 326 140 69 chr10 99743518 99744331 -45844957 - L1M2 LINE L1 -5397 1452 582 7819 111 14 45 chr10 99744976 99746488 -45842800 - HERVH LTR ERV1 -5913 1800 398 270 234 11 96 chr10 99746621 99746715 -45842573 - L2 LINE L2 -2248 1066 981 513 92 0 0 chr10 99747481 99747557 -45841731 + (TAGA)n Simple_repeat Simple_repeat 3 78 0 36 53 0 0 chr10 99747801 99747858 -45841430 + AT_rich Low_complexity Low_complexity 1 57 0 563 236 96 40 chr10 99748357 99748607 -45840681 - MLT1H LTR MaLR -10 539 276 10830 30 1 0 chr10 99748731 99750080 -45839208 - L1P LINE L1 -1106 5040 3691 2861 19 63 0 chr10 99750080 99750398 -45838890 - SVA Other Other -3 1383 1046 303 28 0 0 chr10 99751462 99751498 -45837790 + (TA)n Simple_repeat Simple_repeat 1 36 0 28 0 0 0 chr10 99753584 99753612 -45835676 + AT_rich Low_complexity Low_complexity 1 28 0 256 240 40 0 chr10 99757803 99757903 -45831385 + L1ME4a LINE L1 5203 5306 -840 668 237 101 46 chr10 99757952 99758298 -45830990 + L1ME4a LINE L1 5469 5833 -288 294 218 45 91 chr10 99758385 99758495 -45830793 + L3 LINE CR1 1470 1574 -3 514 295 147 6 chr10 99758570 99758726 -45830562 + MER5A DNA MER1_type 9 186 -3 6717 151 34 121 chr10 99759197 99760024 -45829264 - L1 LINE L1 -1236 4910 4012 401 135 81 0 chr10 99760024 99760098 -45829190 + Tigger5 DNA MER2_type 2244 2323 0 6717 151 34 121 chr10 99760098 99761191 -45828097 - L1 LINE L1 -2134 4012 3091 29 0 0 0 chr10 99762323 99762352 -45826936 + AT_rich Low_complexity Low_complexity 1 29 0 2250 100 3 0 chr10 99763128 99763418 -45825870 - AluSx SINE Alu -21 291 1 183 290 58 29 chr10 99764398 99764467 -45824821 - L2 LINE L2 -61 3211 3141 374 233 116 20 chr10 99767093 99767239 -45822049 + MLT1J2 LTR MaLR 1 160 -290 11827 29 1 0 chr10 99768033 99769686 -45819602 - L1P1 LINE L1 -586 5569 3915 5669 42 5 0 chr10 99769676 99770417 -45818871 + L1P1 LINE L1 3168 3912 -2234 * 582 330 14 5 chr10 99770877 99771098 -45818190 + L2 LINE L2 2521 2743 -571 180 0 0 0 chr10 99772441 99772461 -45816827 + (T)n Simple_repeat Simple_repeat 1 20 0 25 31 0 0 chr10 99772970 99773002 -45816286 + AT_rich Low_complexity Low_complexity 1 32 0 716 145 77 0 chr10 99774230 99774347 -45814941 + FLAM_C SINE Alu 1 126 -17 2063 160 0 0 chr10 99774358 99774670 -45814618 + AluJb SINE Alu 1 312 0 255 156 22 67 chr10 99775629 99775719 -45813569 + (TATAA)n Simple_repeat Simple_repeat 4 89 0 316 195 93 34 chr10 99775820 99775938 -45813350 - L1MC4 LINE L1 0 8042 7918 452 315 74 37 chr10 99776011 99776309 -45812979 + L1MC/D LINE L1 4541 4849 -1297 558 266 64 5 chr10 99776534 99776722 -45812566 - L2 LINE L2 -244 3069 2871 386 297 81 39 chr10 99777013 99777272 -45812016 + L1MC/D LINE L1 5255 5524 -2284 2252 86 0 48 chr10 99777308 99777622 -45811666 - AluSc SINE Alu -10 299 1 210 277 0 31 chr10 99778654 99778719 -45810569 + L3 LINE CR1 1510 1572 -5 1191 241 149 45 chr10 99779919 99780778 -45808510 + L2 LINE L2 2367 3313 0 279 157 0 0 chr10 99781344 99781395 -45807893 + (TG)n Simple_repeat Simple_repeat 2 52 0 642 189 0 8 chr10 99782093 99782215 -45807073 + HERVH LTR ERV1 2875 2995 -4718 * 955 132 6 19 chr10 99782191 99782350 -45806938 + HERVH LTR ERV1 3134 3290 -4423 * 6491 118 22 5 chr10 99782340 99783836 -45805452 + HERVH LTR ERV1 3492 5286 -1805 855 200 7 0 chr10 99783836 99783991 -45805297 + HERVH LTR ERV1 4994 5149 -2564 1484 104 17 30 chr10 99783992 99784222 -45805066 + HERVH LTR ERV1 5600 5826 -1887 * 1895 130 118 14 chr10 99784206 99784561 -45804727 + HERVH LTR ERV1 7322 7713 0 2371 65 269 0 chr10 99784561 99784914 -45804374 + LTR7 LTR ERV1 1 448 -2 2011 187 89 53 chr10 99784931 99785349 -45803939 + MLT2B3 LTR ERVL 59 460 -94 356 0 23 0 chr10 99785349 99785393 -45803895 + (TCTA)n Simple_repeat Simple_repeat 2 46 0 2011 187 89 53 chr10 99785393 99785414 -45803874 + MLT2B3 LTR ERVL 460 479 -75 360 0 0 0 chr10 99785414 99785454 -45803834 + (CA)n Simple_repeat Simple_repeat 2 41 0 2011 187 89 53 chr10 99785454 99785484 -45803804 + MLT2B3 LTR ERVL 479 546 -8 231 36 0 0 chr10 99785622 99785650 -45803638 + (GA)n Simple_repeat Simple_repeat 2 29 0 853 163 169 0 chr10 99786388 99786548 -45802740 - MER5A DNA MER1_type 0 189 3 452 247 120 27 chr10 99786559 99786709 -45802579 + MER5B DNA MER1_type 2 165 -13 242 331 21 28 chr10 99787837 99787982 -45801306 - MLT1K LTR MaLR -13 575 432 211 273 106 0 chr10 99788017 99788083 -45801205 + L2 LINE L2 3221 3293 -20 21 36 0 0 chr10 99788272 99788300 -45800988 + AT_rich Low_complexity Low_complexity 1 28 0 1633 121 67 4 chr10 99788316 99788595 -45800693 - AluSx SINE Alu 0 321 28 232 214 18 0 chr10 99788975 99789031 -45800257 - L1MA10 LINE L1 -14 6320 6264 930 162 0 14 chr10 99789041 99789189 -45800099 + FAM SINE Alu 10 155 -30 256 163 41 0 chr10 99789279 99789328 -45799960 + MER58 DNA MER1_type 2355 2405 -15 2587 148 38 14 chr10 99790489 99790866 -45798422 + MSTA LTR MaLR 1 368 -60 222 62 0 0 chr10 99790866 99790898 -45798390 + (TCTG)n Simple_repeat Simple_repeat 2 33 0 1720 171 24 10 chr10 99790898 99791191 -45798097 - AluJb SINE Alu -15 297 1 2587 148 38 14 chr10 99791191 99791230 -45798058 + MSTA LTR MaLR 367 428 0 189 0 0 0 chr10 99791914 99791935 -45797353 + (A)n Simple_repeat Simple_repeat 1 21 0 227 341 80 35 chr10 99791935 99792161 -45797127 + L1MEd LINE L1 331 566 -5553 810 162 15 0 chr10 99792170 99792306 -45796982 + FRAM SINE Alu 1 134 -42 2959 246 51 48 chr10 99792465 99792880 -45796408 - L1 LINE L1 -3622 3484 3072 1399 196 0 0 chr10 99792880 99793115 -45796173 + MER46A DNA MER2_type 1 235 -1 2959 246 51 48 chr10 99793115 99795335 -45793953 - L1 LINE L1 -4034 3072 3 324 288 25 0 chr10 99796223 99796303 -45792985 - MER5A DNA MER1_type 0 189 108 194 333 0 29 chr10 99796943 99797012 -45792276 - MER5A DNA MER1_type -85 104 38 * 281 175 16 32 chr10 99796953 99797016 -45792272 + MER5A DNA MER1_type 106 167 -22 737 134 0 86 chr10 99797804 99797990 -45791298 + AluSq SINE Alu 2 171 -142 21 36 0 0 chr10 99800712 99800740 -45788548 + AT_rich Low_complexity Low_complexity 1 28 0 2009 128 44 0 chr10 99800743 99800874 -45788414 + AluSq SINE Alu 1 125 -188 468 0 0 0 chr10 99800874 99800926 -45788362 + (TAAA)n Simple_repeat Simple_repeat 2 53 0 2009 128 44 0 chr10 99800926 99801091 -45788197 + AluSq SINE Alu 125 310 -3 368 237 51 42 chr10 99801316 99801434 -45787854 - MARNA DNA Mariner -199 387 269 311 370 89 5 chr10 99801455 99801658 -45787630 + L2 LINE L2 2538 2757 -557 216 264 58 81 chr10 99801850 99801937 -45787351 + L2 LINE L2 3168 3252 -20 226 255 0 0 chr10 99801984 99802035 -45787253 + MARNA DNA Mariner 396 446 -140 1037 190 25 5 chr10 99802097 99802297 -45786991 + MER3 DNA MER1_type 1 204 -5 609 255 151 74 chr10 99803008 99803439 -45785849 + MLT1J LTR MaLR 30 493 -18 212 348 22 45 chr10 99803731 99803820 -45785468 + MIR SINE MIR 19 105 -103 322 236 74 108 chr10 99803910 99804058 -45785230 - MIR SINE MIR -2 260 118 195 250 107 0 chr10 99804409 99804465 -45784823 + L2 LINE L2 3245 3306 -7 1735 100 44 0 chr10 99804625 99804876 -45784412 - L1MA9 LINE L1 0 6312 6051 1520 189 105 67 chr10 99804877 99805248 -45784040 + MSTD LTR MaLR 1 385 -11 4665 134 41 21 chr10 99805256 99805517 -45783771 - L1MA9 LINE L1 -258 6054 5800 414 0 0 0 chr10 99805517 99805563 -45783725 + (TG)n Simple_repeat Simple_repeat 1 46 0 4665 134 41 21 chr10 99805563 99805865 -45783423 - L1MA9 LINE L1 -512 5800 5506 2282 120 0 0 chr10 99805865 99806174 -45783114 - AluSc SINE Alu 0 309 1 4665 134 41 21 chr10 99806174 99806696 -45782592 - L1MA9 LINE L1 -806 5506 4948 5121 82 45 46 chr10 99807162 99808203 -45781085 - SVA Other Other -518 868 38 252 0 0 0 chr10 99808207 99808235 -45781053 + (AGGGGG)n Simple_repeat Simple_repeat 6 33 0 30494 47 2 2 chr10 99808235 99811936 -45777352 - L1P LINE L1 -2446 3700 1 21 57 0 0 chr10 99811946 99811981 -45777307 + AT_rich Low_complexity Low_complexity 1 35 0 6408 231 34 39 chr10 99812026 99813732 -45775556 + L1M4 LINE L1 4 1701 -4841 4676 80 45 12 chr10 99813732 99813750 -45775538 + L1PA8A LINE L1 5472 5488 -643 1763 97 0 0 chr10 99813750 99813976 -45775312 + AluSx SINE Alu 1 226 -86 4676 80 45 12 chr10 99813976 99814596 -45774692 + L1PA8A LINE L1 5488 6131 0 2555 187 68 7 chr10 99814596 99815134 -45774154 + L1MB7 LINE L1 5595 6168 -16 382 311 61 6 chr10 99815402 99815582 -45773706 - L1MC/D LINE L1 -2000 5808 5619 368 261 76 17 chr10 99815612 99815731 -45773557 + MIR3 SINE MIR 3 128 -80 28 29 0 0 chr10 99815873 99815908 -45773380 + AT_rich Low_complexity Low_complexity 1 35 0 1886 122 35 14 chr10 99815909 99816197 -45773091 + AluJb SINE Alu 1 294 -18 624 213 150 63 chr10 99816329 99816486 -45772802 + L1MEd LINE L1 691 833 -5286 2073 138 58 9 chr10 99816486 99816811 -45772477 + MER61A LTR ERV1 1 341 -2 624 213 150 63 chr10 99816811 99817034 -45772254 + L1MEd LINE L1 833 1104 -5015 328 158 0 0 chr10 99817079 99817136 -45772152 - MER92C LTR ERV1 -2 552 496 601 233 57 66 chr10 99817161 99817389 -45771899 - MER92C LTR ERV1 -328 226 1 327 356 50 12 chr10 99817389 99817549 -45771739 + HAL1 LINE L1 1231 1396 -1111 412 181 105 19 chr10 99818377 99818482 -45770806 - L2 LINE L2 -4 3268 3155 5596 118 17 3 chr10 99819569 99820341 -45768947 + LTR39 LTR ERV1 1 783 0 2016 143 60 30 chr10 99820807 99821171 -45768117 - THE1C LTR MaLR 0 375 1 476 353 6 6 chr10 99821685 99821858 -45767430 - MIR SINE MIR -82 180 8 2226 148 9 32 chr10 99822141 99822486 -45766802 - MER1B DNA MER1_type 0 337 1 594 245 69 25 chr10 99822896 99823100 -45766188 + LTR7 LTR ERV1 238 450 0 367 128 105 12 chr10 99823479 99823565 -45765723 + L1MD3 LINE L1 6480 6573 -1422 2355 250 72 15 chr10 99823573 99824305 -45764983 + L1MC4 LINE L1 7269 8042 0 355 109 156 0 chr10 99824369 99824433 -45764855 - MLT1D LTR MaLR -5 500 427 516 204 175 0 chr10 99824433 99824570 -45764718 - MLT1D LTR MaLR -181 324 164 1376 185 88 41 chr10 99824585 99824607 -45764681 - MLT1B LTR MaLR -34 356 336 2457 127 3 12 chr10 99824607 99824947 -45764341 + MER1B DNA MER1_type 1 337 0 1376 185 88 41 chr10 99824947 99825264 -45764024 - MLT1B LTR MaLR -54 336 1 267 312 7 28 chr10 99825895 99826036 -45763252 + CT-rich Low_complexity Low_complexity 5 142 0 205 309 0 12 chr10 99826141 99826222 -45763066 + CT-rich Low_complexity Low_complexity 3 82 0 1972 203 13 20 chr10 99826425 99826815 -45762473 - MLT1B LTR MaLR -3 387 1 507 271 105 6 chr10 99826827 99827008 -45762280 + MIR SINE MIR 38 236 -26 187 296 153 0 chr10 99827273 99827371 -45761917 - MIR SINE MIR -69 193 81 629 311 107 38 chr10 99827582 99828226 -45761062 - L2 LINE L2 -17 3255 2566 217 291 17 60 chr10 99830280 99830397 -45758891 + MIR3 SINE MIR 2 113 -95 410 200 24 0 chr10 99831124 99831209 -45758079 + Zaphod DNA AcHobo 3945 4031 0 196 300 0 0 chr10 99831264 99831314 -45757974 - L2 LINE L2 -9 3304 3255 405 268 106 16 chr10 99831728 99831851 -45757437 + L2 LINE L2 3138 3271 -1 398 276 138 13 chr10 99832208 99832440 -45756848 + L1MC4a LINE L1 5589 5849 -1959 527 283 7 20 chr10 99832710 99832862 -45756426 + L2 LINE L2 3158 3307 -6 207 0 0 0 chr10 99834408 99834431 -45754857 + (A)n Simple_repeat Simple_repeat 1 23 0 390 266 121 0 chr10 99834671 99834795 -45754493 + MIR SINE MIR 14 152 -110 2642 109 22 2 chr10 99834838 99835252 -45754036 + L1MA3 LINE L1 5884 6305 0 269 316 9 9 chr10 99835649 99835763 -45753525 - MER81 DNA DNA 0 114 1 7344 28 19 1 chr10 99836643 99837782 -45751506 + L1PA3 LINE L1 5002 6155 0 549 173 15 8 chr10 99837944 99838077 -45751211 + MER53 DNA DNA 37 170 -19 2031 130 21 13 chr10 99838559 99838811 -45750477 - L1MA5 LINE L1 0 6300 6043 2015 112 0 0 chr10 99838811 99839070 -45750218 - AluSx SINE Alu -15 297 39 2031 130 21 13 chr10 99839070 99839194 -45750094 - L1MA5 LINE L1 -257 6043 5921 254 150 138 50 chr10 99839451 99839531 -45749757 - L1ME3A LINE L1 0 6170 6084 266 310 62 47 chr10 99839720 99839849 -45749439 + L2 LINE L2 3104 3234 -38 750 151 0 36 chr10 99840770 99840909 -45748379 - AluSg/x SINE Alu -6 306 173 774 270 66 13 chr10 99841113 99841339 -45747949 + MIR SINE MIR 25 262 0 387 0 0 0 chr10 99841771 99841814 -45747474 + (TA)n Simple_repeat Simple_repeat 1 43 0 222 321 54 0 chr10 99842447 99842503 -45746785 - MER91 DNA MER1_type -79 61 3 456 267 203 5 chr10 99842881 99843068 -45746220 - MIR SINE MIR -12 250 27 2176 118 13 0 chr10 99844163 99844469 -45744819 - AluSx SINE Alu -2 310 1 689 215 168 0 chr10 99844637 99844851 -45744437 - MLT1H1 LTR MaLR -6 536 287 180 77 0 0 chr10 99844853 99844879 -45744409 + (T)n Simple_repeat Simple_repeat 1 26 0 560 256 8 8 chr10 99844886 99845011 -45744277 - AluJb SINE Alu -186 126 2 711 248 30 81 chr10 99845025 99845320 -45743968 - MLT1H1 LTR MaLR -252 303 24 291 281 61 0 chr10 99846101 99846183 -45743105 - L2 LINE L2 0 3272 3186 2311 111 13 0 chr10 99846647 99846953 -45742335 - AluSx SINE Alu -2 310 1 431 272 89 11 chr10 99848546 99848737 -45740551 + MLT1L LTR MaLR 26 231 -384 965 196 127 11 chr10 99849373 99849588 -45739700 + L1ME3A LINE L1 5796 6051 -119 1840 167 0 25 chr10 99849588 99849905 -45739383 - AluJo SINE Alu -3 309 1 965 196 127 11 chr10 99849905 99849965 -45739323 + L1ME3A LINE L1 6051 6103 -67 248 122 0 0 chr10 99850464 99850505 -45738783 + MLT2B3 LTR ERVL 1 41 -513 346 24 0 0 chr10 99850516 99850558 -45738730 + LTR7 LTR ERV1 1 42 -408 1995 134 7 16 chr10 99853269 99853576 -45735712 - AluSx SINE Alu -8 304 1 7304 31 19 0 chr10 99854723 99856269 -45733019 - L1PA4 LINE L1 0 6155 4616 198 228 0 14 chr10 99856506 99856572 -45732716 + MIR SINE MIR 106 170 -38 659 113 350 23 chr10 99857182 99857359 -45731929 + MER46A DNA MER2_type 2 236 0 2102 171 50 2 chr10 99857465 99857903 -45731385 - L1MB7 LINE L1 -74 6608 6150 1370 190 19 15 chr10 99857906 99858169 -45731119 + Tigger7 DNA MER2_type 1 264 -2223 495 140 20 40 chr10 99858171 99858271 -45731017 + Tigger7 DNA MER2_type 2390 2487 0 1502 183 80 27 chr10 99858282 99858836 -45730452 - L1MB7 LINE L1 -529 6143 5563 * 2485 227 57 21 chr10 99858834 99859641 -45729647 - L1MB7 LINE L1 -4712 1934 1099 24 53 0 0 chr10 99859696 99859734 -45729554 + AT_rich Low_complexity Low_complexity 1 38 0 1198 157 5 5 chr10 99859734 99859944 -45729344 - MER2 DNA MER2_type -135 210 1 3833 217 67 30 chr10 99859944 99860985 -45728303 - L1MB7 LINE L1 -5455 1091 5 191 320 40 30 chr10 99861103 99861203 -45728085 - L2 LINE L2 -60 3253 3153 252 152 0 0 chr10 99861441 99861487 -45727801 - L1M4 LINE L1 -872 5274 5229 270 0 0 0 chr10 99861487 99861517 -45727771 + (CA)n Simple_repeat Simple_repeat 2 31 0 914 197 11 6 chr10 99861731 99861909 -45727379 + MER58A DNA MER1_type 20 198 -26 1213 139 15 5 chr10 99862338 99862539 -45726749 + L1PA15 LINE L1 5956 6158 -7 24 32 0 0 chr10 99864594 99864625 -45724663 + AT_rich Low_complexity Low_complexity 1 31 0 2373 34 14 3 chr10 99865137 99865430 -45723858 + L1PA5 LINE L1 5858 6153 -1 387 214 90 0 chr10 99865497 99865586 -45723702 + MIR3 SINE MIR 76 172 -36 25 0 0 0 chr10 99865850 99865875 -45723413 + AT_rich Low_complexity Low_complexity 1 25 0 2888 252 43 22 chr10 99866162 99866832 -45722456 - L1MEc LINE L1 -4540 1856 1148 2042 126 4 0 chr10 99866832 99867129 -45722159 - AluSc SINE Alu 0 298 1 2888 252 43 22 chr10 99867129 99867651 -45721637 - L1MEc LINE L1 -5248 1148 638 1077 134 5 41 chr10 99867669 99867863 -45721425 + MER20 DNA MER1_type 33 219 0 1842 272 47 9 chr10 99867863 99868444 -45720844 - L1MEc LINE L1 -5757 639 37 593 248 142 13 chr10 99868453 99868755 -45720533 - Charlie7 DNA MER1_type -1875 737 397 689 208 86 57 chr10 99868777 99869056 -45720232 - L1MC5 LINE L1 -64 7897 7611 1506 221 57 19 chr10 99869109 99869476 -45719812 + MSTD LTR MaLR 16 396 0 1539 196 50 138 chr10 99869476 99870331 -45718957 - L1MC5 LINE L1 -394 7567 6788 916 234 74 4 chr10 99870336 99870593 -45718695 - L1MC5 LINE L1 -2216 5592 5318 703 244 51 108 chr10 99870621 99871075 -45718213 - Charlie7 DNA MER1_type -2184 428 1 2013 181 55 5 chr10 99871773 99872177 -45717111 - MSTA LTR MaLR 0 428 5 753 160 0 8 chr10 99872587 99872712 -45716576 + FLAM_C SINE Alu 1 124 -19 268 328 43 16 chr10 99872932 99873068 -45716220 - MER5B DNA MER1_type -16 173 20 693 179 16 53 chr10 99874911 99875101 -45714187 + MER20 DNA MER1_type 30 212 -7 186 43 0 0 chr10 99875620 99875643 -45713645 + (GAA)n Simple_repeat Simple_repeat 2 24 0 742 221 17 6 chr10 99876226 99876407 -45712881 + LTR41 LTR ERVL 5 187 -586 2087 115 19 40 chr10 99877775 99878150 -45711138 - Tigger7 DNA MER2_type 0 2487 2121 1252 228 47 0 chr10 99878147 99878423 -45710865 - Tigger7 DNA MER2_type -2189 298 10 * 653 273 69 13 chr10 99879575 99879785 -45709503 - MIR SINE MIR -32 176 3 5189 207 32 32 chr10 99880068 99881531 -45707757 - L1P LINE L1 -2463 3683 2221 300 356 82 67 chr10 99881538 99881808 -45707480 + L2 LINE L2 2993 3266 -6 283 303 147 9 chr10 99881870 99881979 -45707309 + L2 LINE L2 3143 3266 -6 2191 106 13 3 chr10 99882576 99882877 -45706411 - AluSx SINE Alu -8 304 1 205 300 45 120 chr10 99882966 99883233 -45706055 + L2 LINE L2 3021 3267 -5 257 206 27 82 chr10 99883436 99883509 -45705779 + MIR3 SINE MIR 101 169 -39 520 274 16 0 chr10 99883719 99883843 -45705445 - L2 LINE L2 -18 3295 3170 1795 219 95 11 chr10 99884053 99884528 -45704760 - MLT1E2 LTR MaLR 0 626 112 1872 142 21 0 chr10 99884766 99885047 -45704241 + AluSx SINE Alu 1 287 -25 224 59 29 0 chr10 99886659 99886693 -45702595 + (TTA)n Simple_repeat Simple_repeat 3 37 0 18249 46 0 2 chr10 99886696 99889743 -45699545 - L1PA5 LINE L1 -3 6151 3101 13779 64 1 0 chr10 99889743 99891622 -45697666 + L1PA5 LINE L1 1228 3108 -3038 198 209 0 0 chr10 99892439 99892482 -45696806 + (ATG)n Simple_repeat Simple_repeat 3 45 0 1140 293 69 12 chr10 99892776 99893196 -45696092 - LTR16A LTR ERVL 0 450 7 474 260 8 16 chr10 99894514 99894637 -45694651 + L2 LINE L2 3187 3308 -5 235 283 51 21 chr10 99894838 99894959 -45694329 + MIR3 SINE MIR 72 190 -47 1046 251 40 8 chr10 99894974 99895221 -45694067 + MIR SINE MIR 8 262 0 297 309 60 47 chr10 99895489 99895638 -45693650 + MIR SINE MIR 45 195 -67 1968 138 0 24 chr10 99896082 99896373 -45692915 - AluSx SINE Alu -28 284 1 825 315 41 12 chr10 99896403 99896822 -45692466 + L1MEc LINE L1 779 1209 -5929 352 203 69 66 chr10 99897115 99897352 -45691936 + L1MEc LINE L1 1327 1496 -5363 396 0 0 0 chr10 99897352 99897396 -45691892 + (TA)n Simple_repeat Simple_repeat 2 45 0 352 203 69 66 chr10 99897396 99897417 -45691871 + L1MEc LINE L1 1496 1515 -5344 793 274 76 13 chr10 99897616 99898025 -45691263 + L1MEc LINE L1 2183 2722 -4416 3188 184 68 37 chr10 99898031 99898971 -45690317 + L1ME2 LINE L1 5209 6332 -2 338 286 37 32 chr10 99899050 99899160 -45690128 + L1MC4 LINE L1 1861 1969 -6353 2208 134 0 0 chr10 99899160 99899452 -45689836 + AluSx SINE Alu 1 292 -20 338 286 37 32 chr10 99899452 99899557 -45689731 + L1MC4 LINE L1 1969 6983 -1339 * 340 275 0 11 chr10 99899513 99899604 -45689684 - L1MC4 LINE L1 -1339 6703 6614 2561 84 35 24 chr10 99899668 99900039 -45689249 - THE1C LTR MaLR 0 375 1 420 188 58 99 chr10 99900634 99900926 -45688362 + L1MC5 LINE L1 7489 7768 -193 462 269 78 61 chr10 99901679 99901866 -45687422 - MER112 DNA MER1_type -7 253 60 360 0 0 0 chr10 99901866 99901906 -45687382 + (TG)n Simple_repeat Simple_repeat 2 41 0 462 269 78 61 chr10 99901906 99901963 -45687325 - MER112 DNA MER1_type -200 60 5 243 0 0 0 chr10 99902734 99902761 -45686527 + (T)n Simple_repeat Simple_repeat 1 27 0 2171 138 0 0 chr10 99902832 99903143 -45686145 + AluSx SINE Alu 1 311 -1 456 288 113 0 chr10 99903819 99903979 -45685309 + MIR SINE MIR 34 211 -51 970 179 24 33 chr10 99904003 99904215 -45685073 - MER20 DNA MER1_type 0 219 10 201 94 0 0 chr10 99904237 99904269 -45685019 + (TC)n Simple_repeat Simple_repeat 2 33 0 1065 215 136 15 chr10 99904269 99904608 -45684680 + MLT1F1 LTR MaLR 188 567 0 349 284 83 75 chr10 99905145 99905494 -45683794 - MLT1K LTR MaLR -8 580 229 189 0 0 0 chr10 99906356 99906377 -45682911 + (CCTG)n Simple_repeat Simple_repeat 2 22 0 745 256 101 29 chr10 99907473 99907750 -45681538 - MER46C DNA MER2_type -41 297 1 914 91 0 0 chr10 99907867 99907988 -45681300 - AluSc SINE Alu -12 297 177 26 30 0 0 chr10 99908028 99908061 -45681227 + AT_rich Low_complexity Low_complexity 1 33 0 243 0 0 0 chr10 99908080 99908107 -45681181 + (TG)n Simple_repeat Simple_repeat 2 28 0 29 47 0 0 chr10 99908544 99908587 -45680701 + AT_rich Low_complexity Low_complexity 1 43 0 250 296 25 0 chr10 99908775 99908856 -45680432 + MER5B DNA MER1_type 1 83 -95 534 267 34 27 chr10 99908859 99909005 -45680283 + MER5B DNA MER1_type 6 152 -26 228 291 36 0 chr10 99909018 99909073 -45680215 + MER5A DNA MER1_type 83 139 -50 265 326 109 71 chr10 99909834 99910273 -45679015 - L2 LINE L2 -8 3264 2809 342 0 0 0 chr10 99910605 99910643 -45678645 + (TG)n Simple_repeat Simple_repeat 2 39 0 423 254 78 62 chr10 99910824 99911017 -45678271 - MIR SINE MIR 0 262 67 312 258 68 45 chr10 99911631 99911763 -45677525 + MIR SINE MIR 126 260 -2 245 261 0 0 chr10 99911764 99911810 -45677478 + Tigger3(Golem) DNA MER2_type 2 47 -2982 1369 150 45 8 chr10 99911829 99912076 -45677212 + Tigger3(Golem) DNA MER2_type 2783 3038 0 5800 28 9 0 chr10 99912870 99913555 -45675733 - L1PA4 LINE L1 0 6155 5465 2190 121 3 16 chr10 99915803 99916117 -45673171 + AluSg SINE Alu 1 310 0 257 363 110 10 chr10 99916545 99916854 -45672434 + L2 LINE L2 1753 2092 -1222 1465 93 47 0 chr10 99916904 99917119 -45672169 + MER30 DNA MER1_type 6 230 0 481 318 58 39 chr10 99917516 99917774 -45671514 + L2 LINE L2 2632 2894 -420 208 283 186 18 chr10 99918570 99918683 -45670605 + MIR SINE MIR 130 261 -1 390 263 224 24 chr10 99918693 99918898 -45670390 + MIR SINE MIR 5 250 -12 206 261 160 34 chr10 99919093 99919212 -45670076 + MIR3 SINE MIR 71 204 -4 481 299 45 66 chr10 99919460 99919795 -45669493 - MLT1I LTR MaLR -9 400 73 23 0 0 0 chr10 99920384 99920407 -45668881 + AT_rich Low_complexity Low_complexity 1 23 0 382 292 42 0 chr10 99920446 99920566 -45668722 - MIR SINE MIR 0 262 138 30 18 0 54 chr10 99920911 99920967 -45668321 + AT_rich Low_complexity Low_complexity 1 53 0 33 43 0 0 chr10 99921145 99921192 -45668096 + AT_rich Low_complexity Low_complexity 1 47 0 310 244 137 20 chr10 99921423 99921620 -45667668 + L1ME4a LINE L1 5709 5928 -193 240 122 0 0 chr10 99922056 99922097 -45667191 + (CA)n Simple_repeat Simple_repeat 1 41 0 33528 34 1 5 chr10 99922350 99927431 -45661857 - L1PA3 LINE L1 -1 6154 1099 197 337 84 11 chr10 99927543 99927638 -45661650 + L3 LINE CR1 1441 1542 -35 839 233 63 66 chr10 99928845 99929240 -45660048 - L1MC4a LINE L1 -1815 5993 5600 275 369 6 48 chr10 99929897 99930065 -45659223 + MIR3 SINE MIR 39 199 -9 576 294 104 9 chr10 99930233 99930454 -45658834 + MIR SINE MIR 11 252 -10 23 33 0 0 chr10 99930587 99930617 -45658671 + AT_rich Low_complexity Low_complexity 1 30 0 3285 269 91 35 chr10 99931092 99932507 -45656781 - HAL1 LINE L1 -1010 1497 4 1433 265 113 27 chr10 99932579 99933085 -45656203 - MLT1G1 LTR MaLR 0 595 6 213 146 0 0 chr10 99933116 99933164 -45656124 + (T)n Simple_repeat Simple_repeat 1 48 0 30607 104 13 16 chr10 99933591 99939175 -45650113 - L1PA7 LINE L1 0 6154 589 296 160 20 0 chr10 99939201 99939251 -45650037 - MER5A DNA MER1_type -114 75 25 26 0 0 0 chr10 99940919 99940945 -45648343 + AT_rich Low_complexity Low_complexity 1 26 0 30473 111 54 20 chr10 99941078 99947032 -45642256 + L1PA7 LINE L1 1 6154 0 687 219 16 0 chr10 99947033 99947156 -45642132 + MER5A DNA MER1_type 65 189 0 1711 185 62 21 chr10 99947485 99947906 -45641382 + L1MD1 LINE L1 1328 1765 -4775 2067 147 32 0 chr10 99947913 99948225 -45641063 + MSTC LTR MaLR 1 322 -106 5325 228 81 49 chr10 99948235 99948649 -45640639 + L1MD1 LINE L1 1783 2182 -4454 1646 209 3 0 chr10 99948649 99948946 -45640342 + AluJo SINE Alu 1 298 -14 5325 228 81 49 chr10 99948946 99950074 -45639214 + L1MD1 LINE L1 2182 3272 -3364 11585 34 0 3 chr10 99950074 99952248 -45637040 - L1PA5 LINE L1 -3 6151 3981 5325 228 81 49 chr10 99952248 99955134 -45634154 + L1MD1 LINE L1 3272 6357 -279 1939 179 3 21 chr10 99955208 99955544 -45633744 + MER7A DNA MER2_type 18 345 -1 22 0 0 0 chr10 99957005 99957027 -45632261 + AT_rich Low_complexity Low_complexity 1 22 0 2057 141 0 3 chr10 99957052 99957349 -45631939 - AluSx SINE Alu -16 296 1 22 35 0 0 chr10 99957835 99957864 -45631424 + AT_rich Low_complexity Low_complexity 1 29 0 698 159 159 0 chr10 99957991 99958123 -45631165 - MER5A DNA MER1_type 0 189 37 536 255 125 0 chr10 99958286 99958494 -45630794 - L1M4 LINE L1 -1542 4604 4371 546 267 70 29 chr10 99958497 99958547 -45630741 - L1M4 LINE L1 -1797 4349 4302 2520 130 43 16 chr10 99958547 99958970 -45630318 - Tigger2a DNA MER2_type 0 434 1 546 267 70 29 chr10 99958970 99959192 -45630096 - L1M4 LINE L1 -1844 4302 4066 762 262 32 22 chr10 99959211 99959443 -45629845 + L1ME LINE L1 5397 5646 -516 630 178 0 0 chr10 99959971 99960078 -45629210 - FLAM_C SINE Alu -36 107 1 24 53 0 0 chr10 99960351 99960389 -45628899 + AT_rich Low_complexity Low_complexity 1 38 0 1699 244 54 54 chr10 99960417 99961028 -45628260 + L1MC4a LINE L1 6193 6803 -1005 * 3797 231 41 13 chr10 99961025 99962114 -45627174 - L1M4 LINE L1 -2094 4052 2933 1534 157 68 3 chr10 99962111 99962405 -45626883 + L1MC2 LINE L1 5589 5901 -443 * 7925 206 70 67 chr10 99962436 99964255 -45625033 + L1P4 LINE L1 1 1812 -4985 1033 172 15 54 chr10 99964255 99964458 -45624830 + AluJo SINE Alu 107 301 -11 7925 206 70 67 chr10 99964458 99966208 -45623080 + L1P4 LINE L1 1812 3806 -2991 9042 196 24 5 chr10 99966214 99966474 -45622814 + L1P4 LINE L1 4073 4327 -2489 366 61 0 0 chr10 99966474 99966523 -45622765 + (CA)n Simple_repeat Simple_repeat 2 50 0 9042 196 24 5 chr10 99966523 99968281 -45621007 + L1P4 LINE L1 4327 6124 -692 454 271 90 46 chr10 99968358 99968940 -45620348 + L1MEd LINE L1 1371 2025 -4696 2336 151 47 26 chr10 99969022 99969447 -45619841 + Tigger2a DNA MER2_type 1 434 0 339 290 53 83 chr10 99969639 99970007 -45619281 + L1MEd LINE L1 2399 2812 -3909 598 308 142 47 chr10 99970110 99970940 -45618348 - L2 LINE L2 -24 3289 2365 615 278 153 14 chr10 99970940 99971163 -45618125 - L2 LINE L2 -1329 1985 1732 797 236 300 32 chr10 99971199 99971572 -45617716 - LTR33 LTR ERVL -3 518 46 575 261 0 20 chr10 99971605 99971758 -45617530 - L2 LINE L2 -1640 1674 1525 369 80 0 0 chr10 99971818 99971868 -45617420 - SST1 Satellite centromeric -1513 50 1 2719 20 0 3 chr10 99972399 99972703 -45616585 + AluYb8 SINE Alu 1 303 -15 815 282 43 17 chr10 99972736 99973037 -45616251 - L2 LINE L2 -1923 1391 1083 316 346 63 0 chr10 99973463 99973590 -45615698 + MER91C DNA MER1_type 6 140 0 42 57 0 0 chr10 99974263 99974333 -45614955 + AT_rich Low_complexity Low_complexity 1 70 0 24 0 0 0 chr10 99974416 99974440 -45614848 + AT_rich Low_complexity Low_complexity 1 24 0 249 216 0 14 chr10 99974440 99974514 -45614774 - L1ME4a LINE L1 -3 6118 6046 1242 109 6 11 chr10 99974517 99974691 -45614597 + AluSg/x SINE Alu 84 256 -54 350 281 172 0 chr10 99975026 99975229 -45614059 - L1ME4a LINE L1 -288 5833 5596 304 267 128 43 chr10 99975305 99975492 -45613796 - L1ME4a LINE L1 -674 5492 5290 234 227 0 0 chr10 99975909 99975953 -45613335 - L1MC4 LINE L1 -368 7674 7631 742 251 33 31 chr10 99978084 99978304 -45610984 - MIR SINE MIR -38 224 9 25 31 0 0 chr10 99978637 99978669 -45610619 + AT_rich Low_complexity Low_complexity 1 32 0 3031 188 48 13 chr10 99979133 99979761 -45609527 + MER82 DNA MER2_type 1 650 -3 781 271 79 5 chr10 99981087 99981290 -45607998 - MER58A DNA MER1_type 0 224 7 22 0 0 0 chr10 99981426 99981448 -45607840 + AT_rich Low_complexity Low_complexity 1 22 0 26 0 0 0 chr10 99983325 99983351 -45605937 + AT_rich Low_complexity Low_complexity 1 26 0 273 300 150 0 chr10 99985592 99985732 -45603556 - L1ME4a LINE L1 -84 6037 5877 277 283 116 45 chr10 99985755 99985953 -45603335 - L1ME4a LINE L1 -341 5780 5569 2721 32 0 0 chr10 99986109 99986419 -45602869 + AluY SINE Alu 1 310 -1 417 336 48 0 chr10 99987104 99987250 -45602038 + MIR3 SINE MIR 47 199 -9 708 206 7 52 chr10 99987333 99987508 -45601780 - FRAM SINE Alu 0 168 1 224 286 104 0 chr10 99987623 99987700 -45601588 + MIR SINE MIR 88 172 -90 29 0 0 0 chr10 99988706 99988735 -45600553 + AT_rich Low_complexity Low_complexity 1 29 0 26 30 0 0 chr10 99989489 99989522 -45599766 + AT_rich Low_complexity Low_complexity 1 33 0 360 214 14 0 chr10 99989538 99989608 -45599680 + L3 LINE CR1 1471 1541 -36 25 0 0 0 chr10 99991280 99991305 -45597983 + AT_rich Low_complexity Low_complexity 1 25 0 472 216 34 2 chr10 99992089 99992202 -45597086 + MIR SINE MIR 53 169 -39 36 100 0 0 chr10 99992330 99992450 -45596838 + AT_rich Low_complexity Low_complexity 1 120 0 2016 115 0 51 chr10 99992461 99992775 -45596513 - AluSx SINE Alu -14 298 1 1084 122 12 24 chr10 99992783 99992947 -45596341 - AluSx SINE Alu -7 303 142 981 120 0 0 chr10 99993053 99993186 -45596102 - AluSx SINE Alu -179 133 1 307 287 20 30 chr10 99993194 99993295 -45595993 + MIR SINE MIR 30 129 -133 356 219 44 31 chr10 99993295 99993455 -45595833 + (TCTA)n Simple_repeat Simple_repeat 4 165 0 524 271 135 14 chr10 99993873 99994080 -45595208 - MLT1J2 LTR MaLR -18 432 201 433 309 72 36 chr10 99994097 99994401 -45594887 - LTR16A LTR ERVL -76 374 60 407 170 53 11 chr10 99994432 99994526 -45594762 - MLT1J1 LTR MaLR -339 107 10 192 262 98 22 chr10 99995442 99995570 -45593718 + MIR SINE MIR 65 204 -4 2342 166 103 13 chr10 99995812 99996269 -45593019 - MLT1D LTR MaLR -7 498 1 293 306 52 6 chr10 99996589 99996762 -45592526 + L1ME4a LINE L1 5844 6024 -97 237 261 103 21 chr10 99997178 99997329 -45591959 - MIR SINE MIR -29 179 1 204 40 0 0 chr10 99999055 99999080 -45590208 + (TTCCC)n Simple_repeat Simple_repeat 1 25 0 2357 94 0 0 chr10 99999317 99999614 -45589674 - AluSq SINE Alu -16 297 1 28836 66 10 4 chr10 100000091 100004688 -45584600 + L1PA7 LINE L1 1536 6154 0 687 219 16 0 chr10 100004689 100004812 -45584476 + MER5A DNA MER1_type 65 189 0 1711 185 62 21 chr10 100005141 100005562 -45583726 + L1MDa LINE L1 1328 1765 -4775 2045 151 32 0 chr10 100005569 100005881 -45583407 + MSTC LTR MaLR 1 322 -106 3256 196 97 21 chr10 100005891 100006306 -45582982 + L1MDa LINE L1 1783 2165 -4375 1646 209 3 0 chr10 100006306 100006603 -45582685 + AluJo SINE Alu 1 298 -14 3256 196 97 21 chr10 100006603 100007734 -45581554 + L1MDa LINE L1 2165 3435 -3105 877 44 18 0 chr10 100007738 100007851 -45581437 - L1PA5 LINE L1 -3 6151 6037 1866 140 0 51 chr10 100007958 100008272 -45581016 - AluSx SINE Alu -14 298 1 2057 105 6 74 chr10 100008280 100008605 -45580683 - AluSg SINE Alu -7 303 1 21 0 0 0 chr10 100010206 100010227 -45579061 + AT_rich Low_complexity Low_complexity 1 21 0 26 30 0 0 chr10 100011981 100012014 -45577274 + AT_rich Low_complexity Low_complexity 1 33 0 27 87 0 0 chr10 100013576 100013645 -45575643 + AT_rich Low_complexity Low_complexity 1 69 0 23 0 0 0 chr10 100013719 100013742 -45575546 + AT_rich Low_complexity Low_complexity 1 23 0 1310 59 5 27 chr10 100014072 100014259 -45575029 + L1PA15 LINE L1 5308 5490 -675 42906 33 22 1 chr10 100014259 100020283 -45569005 + L1PA2 LINE L1 1 6155 0 4204 104 68 14 chr10 100020290 100020942 -45568346 + L1PA15 LINE L1 5476 6162 -3 558 305 47 42 chr10 100021827 100022063 -45567225 + MIR SINE MIR 20 256 -6 2061 130 11 54 chr10 100022482 100022836 -45566452 - MER1B DNA MER1_type 0 339 1 403 319 0 9 chr10 100022886 100022999 -45566289 - MIR SINE MIR -117 145 34 368 361 16 8 chr10 100023010 100023132 -45566156 + L2 LINE L2 3191 3313 0 685 195 185 44 chr10 100026300 100026505 -45562783 + MIR SINE MIR 15 248 -14 456 295 123 20 chr10 100027245 100027594 -45561694 - L1ME LINE L1 -479 5642 5258 496 200 109 79 chr10 100027611 100027776 -45561512 + MIR SINE MIR 35 204 -58 217 184 13 40 chr10 100027782 100027858 -45561430 + (TATATG)n Simple_repeat Simple_repeat 3 76 0 235 234 47 0 chr10 100027884 100027948 -45561340 + MIR SINE MIR 196 262 0 459 299 84 31 chr10 100028278 100029145 -45560143 - L1MEd LINE L1 -4759 1551 495 287 321 134 23 chr10 100029174 100029473 -45559815 - L1MEd LINE L1 -5735 384 53 184 262 0 0 chr10 100029538 100029580 -45559708 - L2 LINE L2 -4 3309 3268 2442 81 0 3 chr10 100029820 100030128 -45559160 - AluY SINE Alu -4 307 1 248 279 0 0 chr10 100031488 100031549 -45557739 + (TG)n Simple_repeat Simple_repeat 2 62 0 454 284 102 29 chr10 100031667 100031876 -45557412 - MIR SINE MIR -10 252 32 259 309 17 0 chr10 100031981 100032074 -45557214 + MIR SINE MIR 31 127 -95 252 246 128 57 chr10 100032215 100032496 -45556792 + L1M4 LINE L1 2971 3271 -2875 6587 88 15 15 chr10 100033201 100033385 -45555903 + L1PA11 LINE L1 5254 5437 -737 2104 120 0 28 chr10 100033385 100033702 -45555586 + AluSx SINE Alu 3 310 -2 6587 88 15 15 chr10 100033702 100034436 -45554852 + L1PA11 LINE L1 5436 6172 -2 310 287 67 67 chr10 100034616 100034811 -45554477 + HAL1b LINE L1 453 647 -701 2329 115 0 6 chr10 100034956 100035270 -45554018 - AluSx SINE Alu 0 312 1 272 287 20 30 chr10 100035278 100035379 -45553909 + MIR SINE MIR 30 129 -133 356 219 44 31 chr10 100035379 100035539 -45553749 + (TCTA)n Simple_repeat Simple_repeat 4 165 0 535 266 130 10 chr10 100035957 100036164 -45553124 - MLT1J2 LTR MaLR -18 432 201 436 309 72 36 chr10 100036181 100036485 -45552803 - LTR16A LTR ERVL -76 374 60 417 170 53 11 chr10 100036516 100036610 -45552678 - MLT1J1 LTR MaLR -339 107 10 2407 166 103 13 chr10 100037897 100038354 -45550934 - MLT1D LTR MaLR -7 498 1 318 306 52 6 chr10 100038674 100038847 -45550441 + L1ME4a LINE L1 5844 6024 -97 221 247 45 22 chr10 100039325 100039414 -45549874 - MIR SINE MIR -171 91 1 204 40 0 0 chr10 100041140 100041165 -45548123 + (TTCCC)n Simple_repeat Simple_repeat 1 25 0 2389 94 0 0 chr10 100041402 100041699 -45547589 - AluSq SINE Alu -16 297 1 31950 37 3 0 chr10 100042176 100046776 -45542512 + L1PA5 LINE L1 1536 6145 -9 23 0 0 0 chr10 100046776 100046799 -45542489 + AT_rich Low_complexity Low_complexity 1 23 0 461 180 54 5 chr10 100046842 100046900 -45542388 - L1P4 LINE L1 -612 5553 5499 1145 122 0 11 chr10 100046900 100047088 -45542200 - L1MA6 LINE L1 0 6300 6115 461 180 54 5 chr10 100047088 100047176 -45542112 - L1P4 LINE L1 -666 5499 5389 29 0 0 0 chr10 100047176 100047205 -45542083 + AT_rich Low_complexity Low_complexity 1 29 0 291 282 109 19 chr10 100048084 100048240 -45541048 + MIR SINE MIR 2 171 -91 550 299 18 0 chr10 100048397 100048561 -45540727 + MIR SINE MIR 88 254 -8 592 261 24 18 chr10 100049212 100049377 -45539911 - MIR3 SINE MIR -35 173 8 1342 225 50 24 chr10 100049424 100049878 -45539410 - L1ME3A LINE L1 -96 6074 5565 404 196 38 63 chr10 100049905 100050063 -45539225 - MIR3 SINE MIR -52 156 3 351 235 43 17 chr10 100050808 100050923 -45538365 + MER103 DNA DNA 36 153 -13 2430 122 8 19 chr10 100050944 100051312 -45537976 - THE1B LTR MaLR 0 364 1 1978 196 38 94 chr10 100051609 100052268 -45537020 + MLT1G LTR MaLR 2 590 0 388 304 46 46 chr10 100052986 100053022 -45536266 - L2 LINE L2 -529 2785 2750 2043 122 24 0 chr10 100053022 100053310 -45535978 - AluSx SINE Alu -17 295 1 388 304 46 46 chr10 100053310 100053510 -45535778 - L2 LINE L2 -563 2751 2549 1620 141 6 86 chr10 100053836 100054163 -45535125 + AluJo SINE Alu 1 301 -11 339 85 0 0 chr10 100054299 100054346 -45534942 + (GGGA)n Simple_repeat Simple_repeat 4 50 0 473 299 99 28 chr10 100054346 100054700 -45534588 + HAL1b LINE L1 477 855 -493 2004 134 28 7 chr10 100055021 100055312 -45533976 + AluSg SINE Alu 1 297 -13 228 217 67 0 chr10 100055356 100055416 -45533872 + L1MC5 LINE L1 7161 7224 -737 435 244 155 25 chr10 100055491 100055807 -45533481 + L1MC5 LINE L1 7235 7591 -370 310 227 47 47 chr10 100056169 100056297 -45532991 + L1MC5 LINE L1 7609 7736 -225 408 330 41 10 chr10 100056495 100056689 -45532599 - MIR SINE MIR -44 218 19 24 32 0 0 chr10 100057752 100057783 -45531505 + AT_rich Low_complexity Low_complexity 1 31 0 2181 110 3 32 chr10 100057793 100058102 -45531186 + AluSx SINE Alu 1 300 -12 1624 210 40 100 chr10 100058115 100058696 -45530592 - L1MC4 LINE L1 -31 8011 7466 484 260 145 25 chr10 100058696 100058896 -45530392 + MLT1K LTR MaLR 332 555 -33 1169 107 173 5 chr10 100059297 100059494 -45529794 - MER30 DNA MER1_type 0 230 1 1956 196 2 30 chr10 100059759 100060157 -45529131 - MLT1B LTR MaLR -3 387 1 339 320 95 52 chr10 100060204 100060435 -45528853 - MLT1L LTR MaLR -38 577 337 311 256 0 13 chr10 100060428 100060506 -45528782 - MLT1J LTR MaLR -325 186 110 * 1902 149 7 3 chr10 100060538 100060833 -45528455 + AluSx SINE Alu 1 296 -16 3322 170 9 12 chr10 100060843 100061407 -45527881 + MER68 LTR ERV1 1 562 0 1950 139 3 35 chr10 100061927 100062244 -45527044 - AluSx SINE Alu -5 307 1 212 250 0 11 chr10 100063424 100063516 -45525772 + CT-rich Low_complexity Low_complexity 6 96 0 2211 121 0 3 chr10 100064233 100064531 -45524757 - AluSg SINE Alu -13 297 1 2363 104 9 15 chr10 100065122 100065458 -45523830 - MER1B DNA MER1_type 0 337 4 340 253 40 0 chr10 100066118 100066217 -45523071 + MIR SINE MIR 43 145 -63 22 35 0 0 chr10 100066559 100066588 -45522700 + AT_rich Low_complexity Low_complexity 1 29 0 273 294 15 0 chr10 100066677 100066745 -45522543 + L2 LINE L2 3230 3298 -15 751 197 178 0 chr10 100066927 100067079 -45522209 - MER20 DNA MER1_type -18 201 23 185 294 0 0 chr10 100067315 100067366 -45521922 - L2 LINE L2 -5 3308 3258 214 179 26 0 chr10 100067558 100067597 -45521691 + GA-rich Low_complexity Low_complexity 3 42 0 216 0 0 0 chr10 100068802 100068826 -45520462 + (A)n Simple_repeat Simple_repeat 1 24 0 255 235 49 49 chr10 100069503 100069605 -45519683 - MLT1L LTR MaLR -9 606 505 381 274 89 7 chr10 100069720 100069855 -45519433 - MLT1L LTR MaLR -297 318 173 262 200 154 0 chr10 100069893 100069958 -45519330 - MLT1L LTR MaLR -532 83 9 1865 195 11 77 chr10 100069996 100070448 -45518840 + MLT2B1 LTR ERVL 1 422 -98 620 242 69 0 chr10 100070763 100070958 -45518330 + MIR SINE MIR 56 262 0 237 389 56 0 chr10 100071017 100071161 -45518127 + L2 LINE L2 3118 3269 -3 237 217 100 17 chr10 100071337 100071397 -45517891 - L2 LINE L2 -4 3309 3245 2652 100 5 18 chr10 100071621 100072001 -45517287 - THE1C LTR MaLR 0 375 1 10408 90 46 40 chr10 100072001 100073571 -45515717 - THE1C-int LTR MaLR 0 1580 1 2476 118 21 16 chr10 100073571 100073944 -45515344 - THE1C LTR MaLR 0 375 1 304 262 117 0 chr10 100075061 100075164 -45514124 - L2 LINE L2 -1 3312 3198 1690 173 3 7 chr10 100075460 100075749 -45513539 + AluJo SINE Alu 1 288 -24 284 344 112 1 chr10 100077147 100077340 -45511948 - MIR SINE MIR -15 247 33 811 148 0 0 chr10 100077579 100077742 -45511546 - FLAM_A SINE Alu 0 163 1 738 266 37 21 chr10 100077939 100078180 -45511108 + MIR SINE MIR 18 262 0 497 181 181 16 chr10 100078186 100078313 -45510975 + L2 LINE L2 3162 3309 -4 368 293 115 6 chr10 100078341 100078515 -45510773 - MIR SINE MIR -66 196 4 306 261 11 23 chr10 100078924 100079012 -45510276 + L2 LINE L2 3185 3271 -1 305 353 33 0 chr10 100079021 100079143 -45510145 + MIR3 SINE MIR 37 162 -46 1676 202 19 39 chr10 100079623 100079985 -45509303 - MLT2B1 LTR ERVL -8 512 158 1878 147 65 12 chr10 100080009 100080536 -45508752 - MER51A LTR ERV1 -9 625 1 828 178 12 31 chr10 100080536 100080699 -45508589 - MLT2B1 LTR ERVL -360 160 1 301 312 150 29 chr10 100080740 100080911 -45508377 - MIR3 SINE MIR -5 203 12 398 273 38 30 chr10 100080911 100081043 -45508245 - MER5B DNA MER1_type 0 178 46 1873 140 82 18 chr10 100081060 100081187 -45508101 + MLT1A1 LTR MaLR 1 118 -247 2618 118 67 0 chr10 100081187 100081592 -45507696 + MSTB1 LTR MaLR 1 432 0 1873 140 82 18 chr10 100081592 100081807 -45507481 + MLT1A1 LTR MaLR 118 365 0 2366 234 124 13 chr10 100081807 100082485 -45506803 - L1ME3A LINE L1 -17 6153 5401 2824 16 0 0 chr10 100083586 100083890 -45505398 - AluYb8 SINE Alu -14 304 1 1765 122 25 0 chr10 100083964 100084389 -45504899 + AluSx SINE Alu 33 463 0 667 286 53 29 chr10 100084453 100084698 -45504590 - MLT1I LTR MaLR 0 409 159 1641 193 3 10 chr10 100085335 100085630 -45503658 - AluJb SINE Alu -19 293 1 396 172 86 0 chr10 100086664 100086757 -45502531 + MER5A DNA MER1_type 9 109 -80 375 255 0 10 chr10 100086868 100086966 -45502322 + MIR SINE MIR 21 117 -91 574 281 104 50 chr10 100087365 100087863 -45501425 + L1ME4a LINE L1 5548 6072 -49 1564 106 0 0 chr10 100087953 100088332 -45500956 + AluSg/x SINE Alu 85 463 0 667 286 53 29 chr10 100088396 100088641 -45500647 - MLT1I LTR MaLR 0 409 159 779 209 7 0 chr10 100089278 100089426 -45499862 - AluSg/x SINE Alu -19 291 143 1621 111 5 0 chr10 100089530 100089746 -45499542 - AluSc SINE Alu -82 227 11 827 87 0 0 chr10 100089746 100089849 -45499439 + AluSg/x SINE Alu 187 289 -21 443 231 8 0 chr10 100090438 100090572 -45498716 + (TAG)n Simple_repeat Simple_repeat 1 135 0 402 235 150 8 chr10 100090592 100090720 -45498568 - MIR SINE MIR -53 209 60 216 314 118 0 chr10 100091468 100091570 -45497718 - L2 LINE L2 -1 3271 3158 655 268 162 56 chr10 100091585 100092086 -45497202 - MLT1L LTR MaLR 0 615 62 379 262 0 19 chr10 100092587 100092694 -45496594 + L1MC4a LINE L1 5736 5840 -1968 2265 188 142 10 chr10 100092754 100093253 -45496035 + MLT1F1 LTR MaLR 1 565 -2 489 263 181 6 chr10 100093289 100093460 -45495828 - MIR SINE MIR -21 241 41 228 111 0 0 chr10 100093483 100093519 -45495769 + (CTATA)n Simple_repeat Simple_repeat 2 37 0 222 37 0 0 chr10 100093525 100093552 -45495736 + (TG)n Simple_repeat Simple_repeat 2 28 0 761 140 0 0 chr10 100093595 100093702 -45495586 + AluSq/x SINE Alu 1 107 -206 2037 93 29 14 chr10 100093820 100094098 -45495190 - AluSq SINE Alu 0 313 32 380 267 83 0 chr10 100095080 100095200 -45494088 - MER117 DNA MER1_type -50 147 18 224 279 0 0 chr10 100095433 100095494 -45493794 + MIR SINE MIR 85 145 -63 478 251 114 66 chr10 100095597 100095757 -45493531 + MLT1J LTR MaLR 1 175 -336 2460 73 3 0 chr10 100095757 100096059 -45493229 + AluSx SINE Alu 1 303 -9 478 251 114 66 chr10 100096059 100096109 -45493179 + MLT1J LTR MaLR 175 221 -290 498 232 13 60 chr10 100096404 100096433 -45492855 + Charlie8 DNA MER1_type 82 111 -2306 1949 173 0 0 chr10 100096433 100096734 -45492554 + AluJb SINE Alu 1 301 -11 498 232 13 60 chr10 100096734 100096855 -45492433 + Charlie8 DNA MER1_type 111 225 -2192 2015 141 23 0 chr10 100096879 100097184 -45492104 - AluSq SINE Alu -1 312 1 437 294 88 12 chr10 100097483 100097653 -45491635 + MLT1J LTR MaLR 206 388 -123 180 111 0 0 chr10 100097731 100097758 -45491530 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1611 288 65 24 chr10 100098014 100098598 -45490690 - MLT1L LTR MaLR 0 615 8 428 266 0 0 chr10 100098603 100098697 -45490591 + MIR3 SINE MIR 81 174 -34 189 147 0 0 chr10 100098953 100098987 -45490301 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 219 209 77 66 chr10 100099553 100099644 -45489644 + MIR SINE MIR 60 151 -111 278 235 0 0 chr10 100099785 100099836 -45489452 - L2 LINE L2 -17 3296 3246 183 200 0 0 chr10 100099865 100099900 -45489388 - L2 LINE L2 -23 3290 3256 27 0 0 0 chr10 100099900 100099927 -45489361 + AT_rich Low_complexity Low_complexity 1 27 0 543 265 7 27 chr10 100100249 100100396 -45488892 + MIR SINE MIR 31 174 -88 186 240 80 27 chr10 100100740 100100815 -45488473 - MIR SINE MIR -25 237 159 210 296 12 12 chr10 100101259 100101340 -45487948 + MIR3 SINE MIR 98 178 -30 * 422 305 136 25 chr10 100101337 100101616 -45487672 - L2 LINE L2 -1 3312 3003 377 270 121 0 chr10 100102365 100102539 -45486749 - MIR SINE MIR -21 241 47 217 226 0 0 chr10 100103421 100103474 -45485814 + L2 LINE L2 3200 3252 -61 324 291 117 61 chr10 100103621 100104050 -45485238 + L2 LINE L2 2816 3268 -4 280 283 58 17 chr10 100104294 100104414 -45484874 + L2 LINE L2 2696 2820 -494 422 278 78 11 chr10 100104949 100105129 -45484159 - MIR SINE MIR -37 225 34 280 263 98 23 chr10 100105320 100105453 -45483835 - MIR SINE MIR -67 195 53 197 219 141 0 chr10 100107624 100107688 -45481600 + L2 LINE L2 3240 3312 -1 3512 157 34 57 chr10 100107733 100107863 -45481425 - L1MC2 LINE L1 -11 6333 6202 2063 125 4 0 chr10 100107863 100108163 -45481125 - AluSx SINE Alu 0 301 1 3512 157 34 57 chr10 100108163 100108791 -45480497 - L1MC2 LINE L1 -142 6202 5591 206 305 67 0 chr10 100109048 100109153 -45480135 - L2 LINE L2 -87 3226 3115 351 288 96 0 chr10 100110534 100110680 -45478608 - MIR SINE MIR 0 262 103 823 193 45 6 chr10 100110684 100110860 -45478428 + MER5A DNA MER1_type 3 185 -4 281 238 179 0 chr10 100110868 100110952 -45478336 - MIR SINE MIR -157 105 7 23 39 0 39 chr10 100111331 100111346 -45477942 + AT_rich Low_complexity Low_complexity 1 15 -35 1797 105 41 10 chr10 100111346 100111641 -45477647 + L1MA5A LINE L1 5992 6295 -2 23 39 0 39 chr10 100111641 100111677 -45477611 + AT_rich Low_complexity Low_complexity 15 50 0 1816 204 40 49 chr10 100111682 100112153 -45477135 - MLT1C LTR MaLR 0 467 1 336 290 101 2 chr10 100112268 100112405 -45476883 + MER5A DNA MER1_type 8 167 -22 253 286 91 39 chr10 100112286 100112440 -45476848 - MER5A DNA MER1_type -25 164 3 * 337 284 15 22 chr10 100113805 100113947 -45475341 - MIR SINE MIR -64 144 9 1861 190 121 17 chr10 100114634 100115049 -45474239 + MLT2C2 LTR ERVL 3 460 -4 537 209 189 7 chr10 100115293 100115441 -45473847 + MER5A DNA MER1_type 15 189 0 776 249 54 5 chr10 100115581 100115802 -45473486 - MIR SINE MIR 0 262 31 451 251 35 60 chr10 100116222 100116421 -45472867 + L2 LINE L2 3117 3310 -3 263 242 17 5 chr10 100118094 100118163 -45471125 + Charlie8 DNA MER1_type 1349 1407 -1010 1635 176 65 9 chr10 100118242 100118647 -45470641 + LOR1a LTR ERV1 1 497 0 757 50 0 20 chr10 100119059 100119160 -45470128 - L1MA1 LINE L1 0 6302 6204 5737 20 0 0 chr10 100119160 100119795 -45469493 + L1PA3 LINE L1 5510 6152 -3 193 329 24 24 chr10 100120310 100120392 -45468896 + L2 LINE L2 2567 2648 -666 438 36 0 0 chr10 100121542 100121598 -45467690 + (TC)n Simple_repeat Simple_repeat 1 56 0 324 0 0 0 chr10 100121597 100121633 -45467655 + (CA)n Simple_repeat Simple_repeat 1 36 0 * 4859 125 9 21 chr10 100121988 100122778 -45466510 - L1MA7 LINE L1 -1 6290 5511 279 273 16 41 chr10 100123120 100123241 -45466047 - L2 LINE L2 -40 3273 3156 920 206 65 9 chr10 100124334 100124548 -45464740 + MIR SINE MIR 31 256 -6 1351 153 15 0 chr10 100124609 100124812 -45464476 + AluJo SINE Alu 100 305 -7 2536 51 0 16 chr10 100124841 100125155 -45464133 - AluY SINE Alu -2 309 1 181 225 0 0 chr10 100125256 100125296 -45463992 + L2 LINE L2 3221 3260 -12 321 246 0 74 chr10 100125477 100125599 -45463689 - L2 LINE L2 -211 3102 2990 24 32 0 0 chr10 100127087 100127118 -45462170 + AT_rich Low_complexity Low_complexity 1 31 0 2041 100 0 4 chr10 100127125 100127394 -45461894 + AluSc SINE Alu 15 282 -27 307 59 119 0 chr10 100127394 100127512 -45461776 + (TA)n Simple_repeat Simple_repeat 1 132 0 1918 255 77 79 chr10 100127588 100129243 -45460045 - L1ME3A LINE L1 -95 6009 4367 267 145 58 0 chr10 100129296 100129365 -45459923 + (TA)n Simple_repeat Simple_repeat 2 74 0 1803 273 65 47 chr10 100129371 100129425 -45459863 - L1ME3A LINE L1 -1790 4339 4287 1894 217 70 49 chr10 100129425 100129956 -45459332 - MLT1F LTR MaLR 0 542 1 1803 273 65 47 chr10 100129956 100130934 -45458354 - L1ME3A LINE L1 -1842 4287 3289 686 274 64 117 chr10 100131022 100131129 -45458159 - L1ME3A LINE L1 -5443 676 565 1461 159 123 4 chr10 100131129 100131417 -45457871 - AluSx SINE Alu 0 318 1 686 274 64 117 chr10 100131417 100131558 -45457730 - L1ME3A LINE L1 -5554 565 418 8864 111 24 6 chr10 100131558 100132823 -45456465 - HSMAR1 DNA Mariner 0 1287 1 686 274 64 117 chr10 100132823 100133241 -45456047 - L1ME3A LINE L1 -5701 418 43 1608 183 0 43 chr10 100134454 100134755 -45454533 - AluJo SINE Alu -24 288 1 561 293 73 28 chr10 100134782 100135319 -45453969 + L1MEc LINE L1 910 1391 -4981 512 278 90 20 chr10 100135336 100135932 -45453356 + L1MEc LINE L1 1760 2433 -4130 766 255 87 26 chr10 100135976 100136207 -45453081 + MIR SINE MIR 3 247 -15 2620 118 22 0 chr10 100136219 100136575 -45452713 + THE1B LTR MaLR 1 364 0 199 266 202 21 chr10 100136587 100136681 -45452607 - MIR SINE MIR -75 187 77 365 231 149 41 chr10 100136718 100136839 -45452449 + L2 LINE L2 3180 3313 0 676 326 14 5 chr10 100137008 100137226 -45452062 - MIR SINE MIR -11 251 32 778 277 70 84 chr10 100137499 100137805 -45451483 + MLT1L LTR MaLR 132 430 -185 2160 133 7 0 chr10 100137805 100138114 -45451174 + AluSx SINE Alu 1 311 -1 778 277 70 84 chr10 100138114 100138295 -45450993 + MLT1L LTR MaLR 430 612 -3 200 311 107 10 chr10 100138392 100138495 -45450793 + MIR SINE MIR 24 136 -72 231 42 0 62 chr10 100138509 100138557 -45450731 + (TTTTTA)n Simple_repeat Simple_repeat 4 48 0 369 0 0 0 chr10 100138557 100138598 -45450690 + (TG)n Simple_repeat Simple_repeat 2 42 0 736 235 22 28 chr10 100138682 100138861 -45450427 + MER5B DNA MER1_type 1 178 0 413 280 0 0 chr10 100139621 100139714 -45449574 + MIR3 SINE MIR 89 181 -27 704 262 117 68 chr10 100139794 100140118 -45449170 - MER102b DNA MER1_type -1 340 1 307 214 0 0 chr10 100143415 100143471 -45445817 + MIR3 SINE MIR 116 171 -37 397 167 0 22 chr10 100143548 100143638 -45445650 + CT-rich Low_complexity Low_complexity 1 88 0 278 286 0 42 chr10 100143650 100143769 -45445519 - MER5A DNA MER1_type -75 114 1 274 194 58 71 chr10 100144070 100144225 -45445063 + L1ME4a LINE L1 5924 6076 -45 189 132 0 0 chr10 100144695 100144733 -45444555 + (T)n Simple_repeat Simple_repeat 1 38 0 21 0 0 0 chr10 100146190 100146211 -45443077 + AT_rich Low_complexity Low_complexity 1 21 0 310 206 164 0 chr10 100146607 100146680 -45442608 + MIR SINE MIR 68 152 -110 607 244 170 39 chr10 100146841 100146992 -45442296 - MIR SINE MIR -3 259 67 2010 88 0 0 chr10 100146992 100147242 -45442046 + AluSx SINE Alu 56 305 -7 607 244 170 39 chr10 100147242 100147319 -45441969 - MIR SINE MIR -195 67 1 312 252 97 19 chr10 100147375 100147478 -45441810 - MIR SINE MIR -56 152 42 296 230 72 58 chr10 100147584 100147723 -45441565 + L1ME4a LINE L1 5954 6094 -27 28 0 0 0 chr10 100148709 100148737 -45440551 + AT_rich Low_complexity Low_complexity 1 28 0 759 226 152 5 chr10 100148886 100149090 -45440198 - MIR SINE MIR -10 252 19 2257 99 3 6 chr10 100149630 100149942 -45439346 + AluSx SINE Alu 1 311 -1 1787 148 35 7 chr10 100150243 100150527 -45438761 - AluSx SINE Alu -20 292 1 2491 60 0 3 chr10 100151352 100151653 -45437635 - AluY SINE Alu -11 300 1 2263 117 0 0 chr10 100151758 100152058 -45437230 - AluSx SINE Alu -12 300 1 1563 92 0 0 chr10 100152932 100153127 -45436161 - L1PA13 LINE L1 -19 6144 5950 2250 116 0 0 chr10 100153609 100153911 -45435377 + AluSq SINE Alu 1 302 -11 361 362 41 0 chr10 100154192 100154359 -45434929 - MIR SINE MIR -64 144 18 540 312 90 69 chr10 100154419 100155105 -45434183 + L2 LINE L2 2466 3234 -38 332 284 100 106 chr10 100155826 100156146 -45433142 + L2 LINE L2 2945 3262 -10 30950 112 15 61 chr10 100156151 100162608 -45426680 + L1PA7 LINE L1 9 6152 -2 276 256 49 12 chr10 100162740 100162822 -45426466 - L2 LINE L2 0 3313 3229 1222 276 89 13 chr10 100163118 100163572 -45425716 + LTR33 LTR ERVL 3 521 0 498 302 12 87 chr10 100163578 100163706 -45425582 - L2 LINE L2 -488 2826 2725 710 106 10 0 chr10 100163706 100163810 -45425478 + L1PB4 LINE L1 6044 6148 -8 498 302 12 87 chr10 100163810 100163933 -45425355 - L2 LINE L2 -589 2725 2594 193 217 200 0 chr10 100164167 100164227 -45425061 + L2 LINE L2 2953 3024 -248 428 256 211 25 chr10 100164242 100164441 -45424847 - MIR SINE MIR -4 258 23 291 295 78 24 chr10 100164473 100164639 -45424649 - MIR SINE MIR -3 259 85 197 227 0 0 chr10 100164625 100164669 -45424619 + L2 LINE L2 3017 3060 -212 * 496 291 70 42 chr10 100165154 100165367 -45423921 + MIR SINE MIR 10 228 -34 660 321 149 16 chr10 100165404 100165840 -45423448 + L3 LINE CR1 1083 1576 -1 208 338 0 0 chr10 100166040 100166108 -45423180 - L3 LINE CR1 -1 1576 1509 664 216 33 131 chr10 100166206 100166512 -45422776 - MLT1A1 LTR MaLR -89 276 1 1509 231 27 66 chr10 100166667 100166973 -45422315 - L1MEc LINE L1 -3916 2480 2210 952 184 31 18 chr10 100166973 100167136 -45422152 - FRAM SINE Alu -1 165 1 1509 231 27 66 chr10 100167136 100167464 -45421824 - L1MEc LINE L1 -4186 2210 1871 * 2328 272 95 36 chr10 100167452 100167725 -45421563 - L1MEc LINE L1 -5282 1114 859 2558 60 0 0 chr10 100167725 100168025 -45421263 - AluY SINE Alu -11 300 1 2328 272 95 36 chr10 100168025 100168146 -45421142 - L1MEc LINE L1 -5537 859 747 2428 68 19 13 chr10 100168146 100168455 -45420833 + AluY SINE Alu 1 311 0 2328 272 95 36 chr10 100168455 100168556 -45420732 - L1MEc LINE L1 -5649 747 653 1767 181 0 23 chr10 100168556 100168865 -45420423 + AluJo SINE Alu 1 302 -10 2328 272 95 36 chr10 100168865 100169397 -45419891 - L1MEc LINE L1 -5743 653 24 607 276 110 3 chr10 100169393 100169665 -45419623 - L1ME3A LINE L1 -222 5940 5644 * 2906 197 16 109 chr10 100169877 100171040 -45418248 - L1ME1 LINE L1 -5 6161 4789 2184 100 21 3 chr10 100171040 100171331 -45417957 - AluSx SINE Alu -16 296 1 2906 197 16 109 chr10 100171331 100171424 -45417864 - L1ME1 LINE L1 -1377 4789 4689 550 240 66 8 chr10 100171861 100171982 -45417306 - MIR SINE MIR -123 139 12 317 241 230 0 chr10 100172050 100172137 -45417151 + L3 LINE CR1 448 554 -1023 201 301 116 14 chr10 100172205 100172351 -45416937 + L3 LINE CR1 651 811 -766 * 266 297 119 0 chr10 100172350 100172451 -45416837 + L2 LINE L2 3153 3265 -7 187 360 70 0 chr10 100172486 100172586 -45416702 + L3 LINE CR1 846 952 -625 1797 175 4 0 chr10 100172686 100172989 -45416299 - AluJb SINE Alu 0 305 2 8534 120 18 18 chr10 100173285 100173312 -45415976 - HSMAR2 DNA Mariner -1 1301 1275 706 169 119 0 chr10 100173312 100173430 -45415858 + FLAM_A SINE Alu 2 133 0 8534 120 18 18 chr10 100173430 100174703 -45414585 - HSMAR2 DNA Mariner -27 1275 2 252 300 0 0 chr10 100174711 100174781 -45414507 + (TATATG)n Simple_repeat Simple_repeat 6 75 0 1247 154 163 3 chr10 100174958 100175278 -45414010 + L1MC2 LINE L1 5949 6335 -9 1102 278 82 52 chr10 100175712 100176099 -45413189 - L2 LINE L2 -2 3311 2828 3597 83 0 44 chr10 100176099 100176436 -45412852 - LTR46 LTR ERV1 0 460 149 2360 110 7 0 chr10 100176436 100176746 -45412542 - AluSq SINE Alu -1 312 1 3597 83 0 44 chr10 100176746 100176889 -45412399 - LTR46 LTR ERV1 -311 149 1 1102 278 82 52 chr10 100176889 100177126 -45412162 - L2 LINE L2 -485 2828 2599 3079 221 32 42 chr10 100177459 100178293 -45410995 + L1ME2 LINE L1 5280 6105 -59 625 168 0 9 chr10 100178312 100178419 -45410869 + FLAM_A SINE Alu 25 130 -12 429 186 119 91 chr10 100178517 100178727 -45410561 + L1MC4 LINE L1 7826 8041 -1 3195 130 31 24 chr10 100180549 100181094 -45408194 - L1MA8 LINE L1 -207 6084 5536 368 304 106 0 chr10 100181270 100181431 -45407857 + MIR SINE MIR 35 212 -50 3422 129 22 87 chr10 100181435 100181829 -45407459 + L1PA16 LINE L1 5520 5853 -313 2338 103 0 0 chr10 100181829 100182130 -45407158 - AluSq SINE Alu -12 301 1 3422 129 22 87 chr10 100182130 100182410 -45406878 + L1PA16 LINE L1 5853 6150 -16 425 246 179 8 chr10 100182484 100182618 -45406670 - MER5A DNA MER1_type 0 189 33 634 209 16 23 chr10 100182905 100183034 -45406254 + FLAM_A SINE Alu 3 130 -3 1722 157 0 11 chr10 100183038 100183312 -45405976 - AluJo SINE Alu -25 287 17 444 301 32 0 chr10 100183721 100183844 -45405444 + MIR SINE MIR 60 186 -76 200 320 27 60 chr10 100184027 100184177 -45405111 + MIR SINE MIR 47 191 -71 195 42 0 0 chr10 100184541 100184565 -45404723 + (CTG)n Simple_repeat Simple_repeat 1 24 0 286 135 58 0 chr10 100185237 100185289 -45403999 - MER5A DNA MER1_type -1 188 134 1206 161 0 105 chr10 100185297 100185564 -45403724 - AluJo SINE Alu -69 243 5 535 167 0 0 chr10 100185566 100185650 -45403638 - MER5A DNA MER1_type -76 113 30 1358 155 103 10 chr10 100186159 100186224 -45403064 - MER33 DNA MER1_type -2261 324 266 1992 139 3 16 chr10 100186224 100186540 -45402748 + AluJb SINE Alu 1 312 0 1358 155 103 10 chr10 100186540 100186764 -45402524 - MER33 DNA MER1_type -2319 266 8 1178 233 161 35 chr10 100186961 100187365 -45401923 + MLT1J LTR MaLR 12 466 -45 410 264 193 30 chr10 100187497 100187694 -45401594 - MIR SINE MIR 0 262 34 331 333 9 0 chr10 100188272 100188386 -45400902 + L2 LINE L2 3154 3268 -4 202 260 0 0 chr10 100188813 100188863 -45400425 + CT-rich Low_complexity Low_complexity 4 53 0 301 203 97 135 chr10 100189412 100189619 -45399669 - MIR SINE MIR -8 254 56 264 191 48 48 chr10 100189620 100189683 -45399605 + MLT1J LTR MaLR 406 468 -43 1893 131 6 50 chr10 100189794 100190115 -45399173 + AluSx SINE Alu 1 307 -5 2162 161 17 6 chr10 100191080 100191435 -45397853 + MLT1A1 LTR MaLR 1 359 -6 416 300 10 0 chr10 100191870 100191970 -45397318 + L2 LINE L2 3171 3271 -1 590 215 129 0 chr10 100192004 100192167 -45397121 - MIR SINE MIR 0 262 79 869 228 49 91 chr10 100192464 100192958 -45396330 + L2 LINE L2 2733 3211 -102 378 0 0 0 chr10 100193384 100193426 -45395862 + (TTG)n Simple_repeat Simple_repeat 3 44 0 780 244 83 29 chr10 100195170 100195412 -45393876 - MIR SINE MIR 0 262 8 1909 147 0 38 chr10 100195623 100195936 -45393352 + AluJo SINE Alu 1 301 -11 557 298 41 92 chr10 100197314 100197629 -45391659 + L2 LINE L2 2970 3268 -4 198 0 0 0 chr10 100198385 100198407 -45390881 + (TAA)n Simple_repeat Simple_repeat 3 24 0 1113 121 70 45 chr10 100198696 100198895 -45390393 - THE1B LTR MaLR 0 364 161 638 308 47 5 chr10 100199823 100200034 -45389254 + MIR SINE MIR 42 261 -1 183 325 67 17 chr10 100200164 100200284 -45389004 + L2 LINE L2 3147 3272 0 608 143 143 179 chr10 100200492 100200562 -45388726 - MER5A DNA MER1_type 0 189 118 2152 117 3 0 chr10 100200562 100200852 -45388436 - AluSq SINE Alu -22 291 1 608 143 143 179 chr10 100200852 100200977 -45388311 - MER5A DNA MER1_type -71 118 1 3563 137 23 32 chr10 100201011 100201626 -45387662 + L1PA16 LINE L1 5504 6112 -54 2215 94 31 0 chr10 100201626 100201914 -45387374 + AluSx SINE Alu 1 297 -15 423 132 0 0 chr10 100201917 100201985 -45387303 + (TA)n Simple_repeat Simple_repeat 1 68 0 377 127 0 0 chr10 100202010 100202073 -45387215 + L1PA16 LINE L1 6100 6162 -4 481 300 116 50 chr10 100202079 100202632 -45386656 + L2 LINE L2 2698 3272 0 299 275 12 0 chr10 100202907 100202987 -45386301 - MLT1I LTR MaLR -261 148 68 27 0 0 0 chr10 100203295 100203322 -45385966 + AT_rich Low_complexity Low_complexity 1 27 0 303 234 106 0 chr10 100203996 100204090 -45385198 + MIR SINE MIR 33 136 -72 253 263 211 9 chr10 100204190 100204304 -45384984 + L2 LINE L2 3136 3272 0 24 0 0 0 chr10 100204889 100204913 -45384375 + AT_rich Low_complexity Low_complexity 1 24 0 2669 108 0 37 chr10 100205721 100205929 -45383359 - THE1B LTR MaLR 0 364 150 1972 113 0 14 chr10 100205929 100206212 -45383076 + AluSx SINE Alu 1 279 -33 270 0 0 0 chr10 100206218 100206248 -45383040 + (CA)n Simple_repeat Simple_repeat 2 31 0 2669 108 0 37 chr10 100206248 100206410 -45382878 - THE1B LTR MaLR -219 145 1 312 317 128 39 chr10 100207376 100207843 -45381445 + L1ME LINE L1 4595 5103 -1043 5597 165 11 38 chr10 100207856 100209173 -45380115 + L1MA6 LINE L1 5001 6300 0 928 126 0 15 chr10 100209350 100209485 -45379803 - FLAM_C SINE Alu 0 133 1 378 258 60 12 chr10 100209502 100209669 -45379619 + L1ME LINE L1 5266 5440 -681 476 243 93 21 chr10 100210163 100210303 -45378985 + MIR SINE MIR 7 156 -106 1434 168 59 115 chr10 100211511 100211903 -45377385 + MLT1A2 LTR MaLR 5 374 0 378 299 19 28 chr10 100212179 100212286 -45377002 - L2 LINE L2 -7 3265 3160 281 207 115 35 chr10 100213082 100213169 -45376119 - MIR SINE MIR -155 107 14 359 307 91 49 chr10 100213815 100214186 -45375102 - L2 LINE L2 -223 3049 2655 325 216 41 62 chr10 100214252 100214349 -45374939 - MIR3 SINE MIR -5 203 109 2193 143 2 85 chr10 100214426 100214851 -45374437 - MLT1B LTR MaLR 0 390 1 7457 58 25 66 chr10 100215461 100216891 -45372397 - L1PA7 LINE L1 -6 6148 4747 586 272 113 13 chr10 100217221 100217530 -45371758 - L1ME4a LINE L1 -229 5892 5553 537 301 30 0 chr10 100218052 100218218 -45371070 - LTR33A LTR ERVL 0 523 353 433 298 18 83 chr10 100218284 100218452 -45370836 - LTR33A LTR ERVL -336 187 31 475 50 0 0 chr10 100218454 100218514 -45370774 + MADE1 DNA Mariner 1 60 -20 372 285 38 64 chr10 100219044 100219279 -45370009 + HAL1 LINE L1 2245 2473 -34 990 261 90 30 chr10 100219289 100219623 -45369665 + L2 LINE L2 2921 3274 -39 257 128 25 0 chr10 100220389 100220434 -45368854 + MLT2D LTR ERVL 1 41 -373 430 261 103 52 chr10 100220445 100220775 -45368513 - L1MEd LINE L1 -5270 849 503 245 364 117 7 chr10 100220813 100220967 -45368321 - L1MEd LINE L1 -5686 433 263 22 0 0 0 chr10 100221373 100221395 -45367893 + AT_rich Low_complexity Low_complexity 1 22 0 284 261 89 28 chr10 100221553 100221733 -45367555 - L1ME4a LINE L1 -225 5896 5706 261 86 0 0 chr10 100221741 100221776 -45367512 + HSMAR1 DNA Mariner 1253 1287 0 794 154 0 46 chr10 100222582 100222712 -45366576 + FLAM_C SINE Alu 1 124 -9 45 75 0 0 chr10 100222712 100222806 -45366482 + AT_rich Low_complexity Low_complexity 1 94 0 236 276 16 65 chr10 100223209 100223252 -45366036 + L1MC4 LINE L1 7925 7969 -73 1118 178 46 36 chr10 100223252 100223427 -45365861 - MER58A DNA MER1_type -2198 222 42 2329 67 3 0 chr10 100223427 100223743 -45365545 + AluY SINE Alu 1 317 0 1118 178 46 36 chr10 100223743 100223785 -45365503 - MER58A DNA MER1_type -2378 42 2 236 276 16 65 chr10 100223785 100223864 -45365424 + L1MC4 LINE L1 7969 8041 -1 583 266 39 52 chr10 100225113 100225211 -45364077 + MIR SINE MIR 20 118 -144 1924 180 136 37 chr10 100225211 100225667 -45363621 + MLT1D LTR MaLR 5 505 0 583 266 39 52 chr10 100225667 100225801 -45363487 + MIR SINE MIR 118 249 -13 350 320 140 27 chr10 100226358 100226508 -45362780 - L2 LINE L2 -2 3270 3104 * 459 226 355 11 chr10 100226507 100226693 -45362595 - MIR SINE MIR 0 262 13 2448 119 21 32 chr10 100227009 100227388 -45361900 + THE1C LTR MaLR 1 375 0 569 267 65 14 chr10 100227704 100227921 -45361367 + L1M4 LINE L1 2333 2560 -3586 553 322 85 40 chr10 100228059 100228481 -45360807 + L1M4 LINE L1 2753 3205 -2941 2255 120 7 0 chr10 100228481 100228790 -45360498 - AluSx SINE Alu -1 311 1 553 322 85 40 chr10 100228790 100228898 -45360390 + L1M4 LINE L1 3205 3307 -2839 22 35 0 0 chr10 100229210 100229239 -45360049 + AT_rich Low_complexity Low_complexity 1 29 0 2805 291 35 38 chr10 100229305 100230226 -45359062 + L1M4 LINE L1 3836 4753 -1393 1672 174 0 35 chr10 100230228 100230539 -45358749 + AluSg SINE Alu 1 300 -10 289 270 104 26 chr10 100230635 100230750 -45358538 + MIR SINE MIR 29 152 -56 1614 174 24 27 chr10 100230754 100230969 -45358319 + L1ME1 LINE L1 5662 5877 -289 2398 121 114 8 chr10 100230969 100231356 -45357932 - MSTA LTR MaLR 0 428 1 1614 174 24 27 chr10 100231356 100231473 -45357815 + L1ME1 LINE L1 5877 5993 -173 1414 113 15 0 chr10 100231497 100231700 -45357588 + L1MA1 LINE L1 6097 6302 0 451 248 0 0 chr10 100231755 100231868 -45357420 + L1MA10 LINE L1 6215 6327 -7 770 184 0 16 chr10 100231899 100232024 -45357264 + FLAM_C SINE Alu 2 124 -19 33 58 0 35 chr10 100232025 100232112 -45357176 + AT_rich Low_complexity Low_complexity 1 84 0 24 32 0 0 chr10 100232316 100232347 -45356941 + AT_rich Low_complexity Low_complexity 1 31 0 417 268 82 41 chr10 100232506 100232921 -45356367 + L1M4 LINE L1 4397 4828 -1318 25 65 0 0 chr10 100232979 100233025 -45356263 + AT_rich Low_complexity Low_complexity 1 46 0 1095 253 107 24 chr10 100233364 100233739 -45355549 + LTR33 LTR ERVL 116 521 0 254 50 25 0 chr10 100233778 100233818 -45355470 + (TC)n Simple_repeat Simple_repeat 2 42 0 210 216 0 0 chr10 100233922 100233959 -45355329 + (CA)n Simple_repeat Simple_repeat 2 38 0 1224 158 70 9 chr10 100234085 100234110 -45355178 + L1MD2 LINE L1 6112 6134 -225 243 0 0 0 chr10 100234110 100234137 -45355151 + (CA)n Simple_repeat Simple_repeat 2 28 0 1224 158 70 9 chr10 100234137 100234339 -45354949 + L1MD2 LINE L1 6134 6353 -6 2073 138 7 0 chr10 100234347 100234637 -45354651 - AluSx SINE Alu -20 292 1 2129 123 3 0 chr10 100234648 100234940 -45354348 - AluSx SINE Alu -17 295 3 2270 90 30 0 chr10 100235235 100235536 -45353752 + AluSg SINE Alu 1 310 0 557 287 24 57 chr10 100235719 100235966 -45353322 + L2 LINE L2 1083 1321 -1993 1705 309 126 27 chr10 100235976 100237149 -45352139 + L2 LINE L2 1790 3073 -199 1718 145 28 14 chr10 100237227 100237516 -45351772 + MER1B DNA MER1_type 46 338 -1 207 286 14 107 chr10 100237516 100237656 -45351632 + L2 LINE L2 3150 3276 -37 874 294 118 51 chr10 100237833 100238207 -45351081 + L2 LINE L2 2874 3272 0 2060 128 24 0 chr10 100238455 100238744 -45350544 - AluSx SINE Alu -16 296 1 410 217 86 63 chr10 100239424 100239599 -45349689 + MLT1J LTR MaLR 287 465 -46 314 225 12 62 chr10 100239637 100239717 -45349571 + MER5A DNA MER1_type 1 76 -113 2132 291 81 24 chr10 100239953 100240915 -45348373 + L2 LINE L2 2301 3312 -1 573 262 78 59 chr10 100241086 100241357 -45347931 + MLT1L LTR MaLR 120 395 -220 4121 116 6 11 chr10 100241363 100241835 -45347453 + MER51C LTR ERV1 1 451 -189 2261 125 19 32 chr10 100241835 100242204 -45347084 - THE1B LTR MaLR 0 364 1 4121 116 6 11 chr10 100242204 100242394 -45346894 + MER51C LTR ERV1 451 640 0 760 224 47 14 chr10 100242394 100242601 -45346687 + MLT1L LTR MaLR 398 611 -4 214 273 0 0 chr10 100242673 100242717 -45346571 + polypurine Low_complexity Low_complexity 2 45 0 32 26 0 0 chr10 100242947 100242986 -45346302 + AT_rich Low_complexity Low_complexity 1 39 0 22 70 0 0 chr10 100243555 100243598 -45345690 + AT_rich Low_complexity Low_complexity 1 43 0 2394 125 53 0 chr10 100244032 100244407 -45344881 - L1PA15 LINE L1 0 6816 6422 21826 39 10 0 chr10 100244407 100247859 -45341429 - L1PA5 LINE L1 -132 6022 2541 16435 205 27 32 chr10 100247858 100250225 -45339063 - L1PA15 LINE L1 -743 6054 3677 * 720 178 0 0 chr10 100250225 100250343 -45338945 - AluJb SINE Alu -192 120 3 16435 205 27 32 chr10 100250343 100252391 -45336897 - L1PA15 LINE L1 -3120 3677 1533 216 0 0 0 chr10 100252391 100252415 -45336873 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 16435 205 27 32 chr10 100252415 100253500 -45335788 - L1PA15 LINE L1 -5264 1533 444 672 197 88 0 chr10 100253531 100253668 -45335620 - L1PA15 LINE L1 -6638 149 1 626 289 50 17 chr10 100255186 100255366 -45333922 + MIR SINE MIR 41 226 -36 408 299 53 41 chr10 100255830 100256074 -45333214 - L1ME3A LINE L1 -235 5935 5689 6310 167 22 62 chr10 100256684 100256947 -45332341 + L1M3f LINE L1 2 274 -5468 1128 50 0 0 chr10 100256947 100257087 -45332201 + L1PA5 LINE L1 6011 6150 -4 6310 167 22 62 chr10 100257087 100257124 -45332164 + L1M3f LINE L1 274 311 -5431 1964 137 7 3 chr10 100257124 100257431 -45331857 + AluSx SINE Alu 5 312 0 6310 167 22 62 chr10 100257431 100257913 -45331375 + L1M3f LINE L1 311 811 -4931 1431 208 41 10 chr10 100257913 100258206 -45331082 + AluJo SINE Alu 1 302 -10 6310 167 22 62 chr10 100258206 100259172 -45330116 + L1M3f LINE L1 811 1677 -4065 471 206 48 0 chr10 100259169 100259295 -45329993 + L1MA4 LINE L1 6167 6298 -2 * 2318 74 3 10 chr10 100259304 100259601 -45329687 + AluSx SINE Alu 1 295 -17 28 48 0 0 chr10 100259623 100259665 -45329623 + AT_rich Low_complexity Low_complexity 1 42 0 1092 197 68 32 chr10 100259976 100260063 -45329225 + L1ME LINE L1 5461 5543 -621 2354 59 3 13 chr10 100260063 100260367 -45328921 + AluY SINE Alu 1 301 -10 1092 197 68 32 chr10 100260367 100260588 -45328700 + L1ME LINE L1 5543 5780 -384 460 122 33 11 chr10 100260583 100260673 -45328615 - L1ME2 LINE L1 -283 5881 5790 * 1514 262 10 14 chr10 100260777 100261313 -45327975 - L1PA15-16 LINE L1 -3753 3096 2562 1099 145 0 0 chr10 100261322 100261481 -45327807 - AluSg/x SINE Alu -22 288 130 750 206 28 28 chr10 100261489 100261575 -45327713 - L1PA15-16 LINE L1 -4293 2556 2471 2036 109 20 33 chr10 100261575 100261877 -45327411 - AluSx SINE Alu -14 298 1 750 206 28 28 chr10 100261877 100261970 -45327318 - L1PA15-16 LINE L1 -4377 2472 2377 21 0 0 0 chr10 100262093 100262114 -45327174 + AT_rich Low_complexity Low_complexity 1 21 0 843 237 0 0 chr10 100262163 100262319 -45326969 - FRAM SINE Alu -10 156 1 1436 230 57 8 chr10 100262378 100262747 -45326541 + L1ME3A LINE L1 5396 5782 -388 463 212 237 15 chr10 100262760 100262958 -45326330 + L1ME3A LINE L1 5841 6082 -88 365 219 0 0 chr10 100263027 100263109 -45326179 + L1ME3A LINE L1 6084 6165 -5 21 71 0 0 chr10 100263979 100264021 -45325267 + AT_rich Low_complexity Low_complexity 1 42 0 2182 162 0 0 chr10 100265250 100265583 -45323705 + MER1B DNA MER1_type 4 336 -1 2813 120 7 41 chr10 100265614 100266057 -45323231 + MSTC LTR MaLR 1 428 0 40672 33 24 3 chr10 100266853 100272876 -45316412 - L1PA3 LINE L1 -4 6151 1 1220 171 83 88 chr10 100273466 100273726 -45315562 - L1ME3 LINE L1 -1 6161 5902 1535 178 3 83 chr10 100273726 100274052 -45315236 - AluJo SINE Alu -7 305 6 1220 171 83 88 chr10 100274052 100274166 -45315122 - L1ME3 LINE L1 -260 5902 5789 356 199 152 7 chr10 100274168 100274269 -45315019 + AluJo SINE Alu 111 206 -96 1125 191 16 0 chr10 100274396 100274642 -45314646 + L1PB4 LINE L1 2316 2565 -3581 * 9734 169 33 14 chr10 100274637 100277575 -45311713 + L1PB4 LINE L1 2987 5988 -168 2027 131 3 3 chr10 100277575 100277878 -45311410 + AluSx SINE Alu 1 303 0 9734 169 33 14 chr10 100277878 100278046 -45311242 + L1PB4 LINE L1 5988 6151 -5 24 32 0 0 chr10 100278524 100278555 -45310733 + AT_rich Low_complexity Low_complexity 1 31 0 223 135 0 39 chr10 100278568 100278620 -45310668 + (TTTG)n Simple_repeat Simple_repeat 2 51 0 200 337 0 0 chr10 100278969 100279055 -45310233 + CT-rich Low_complexity Low_complexity 6 91 0 926 268 76 26 chr10 100279980 100280439 -45308849 - L1MEc LINE L1 -1108 5107 4626 1270 233 84 17 chr10 100280439 100280959 -45308329 + MLT2F LTR ERVL 8 605 -58 192 200 0 0 chr10 100280959 100281004 -45308284 + (TA)n Simple_repeat Simple_repeat 1 45 0 1532 128 16 4 chr10 100281038 100281280 -45308008 - MER7C DNA MER2_type 0 612 368 504 262 97 0 chr10 100281265 100281410 -45307878 - MER7C DNA MER2_type -443 159 1 * 313 71 0 0 chr10 100281429 100281471 -45307817 + MLT2F LTR ERVL 622 663 0 4530 256 76 26 chr10 100281473 100282889 -45306399 - L1MEc LINE L1 -1592 4623 3279 2433 73 0 6 chr10 100282889 100283202 -45306086 - AluY SINE Alu 0 311 1 4530 256 76 26 chr10 100283202 100283818 -45305470 - L1MEc LINE L1 -2936 3279 2502 1475 223 35 16 chr10 100283818 100284185 -45305103 - MLT1A2 LTR MaLR 0 374 1 4530 256 76 26 chr10 100284185 100284568 -45304720 - L1MEc LINE L1 -3713 2502 2139 1884 168 78 34 chr10 100284662 100284865 -45304423 - MLT1C LTR MaLR 0 467 275 3512 74 13 0 chr10 100284865 100285312 -45303976 + MLT2A2 LTR ERVL 1 453 0 1884 168 78 34 chr10 100285312 100285555 -45303733 - MLT1C LTR MaLR -192 275 1 347 331 83 38 chr10 100285571 100285682 -45303606 - L1MEc LINE L1 -4387 2009 1904 1714 169 43 17 chr10 100285682 100285984 -45303304 - AluJo SINE Alu 0 312 3 347 331 83 38 chr10 100285984 100286138 -45303150 - L1MEc LINE L1 -4492 1904 1732 380 255 62 45 chr10 100286142 100286336 -45302952 - L1MEc LINE L1 -4985 1230 1041 180 179 0 0 chr10 100286336 100286375 -45302913 + CT-rich Low_complexity Low_complexity 2 40 0 380 255 62 45 chr10 100286375 100286432 -45302856 - L1MEc LINE L1 -5174 1041 792 207 0 0 0 chr10 100286594 100286617 -45302671 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1520 173 34 19 chr10 100286623 100286889 -45302399 - AluJo SINE Alu -42 270 1 1605 161 47 40 chr10 100287134 100287432 -45301856 + AluJo SINE Alu 2 301 -11 296 104 0 8 chr10 100288391 100288448 -45300840 - L1MA5A LINE L1 0 6300 6244 213 39 0 0 chr10 100288448 100288474 -45300814 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1393 164 0 56 chr10 100288479 100288729 -45300559 - AluJb SINE Alu -33 279 44 1415 90 9 0 chr10 100288731 100288942 -45300346 - L1MA5A LINE L1 -49 6248 6036 2305 166 62 7 chr10 100288966 100289399 -45299889 - LTR32 LTR ERVL 0 471 15 478 285 61 90 chr10 100289399 100289612 -45299676 - L1M4 LINE L1 -1139 5007 4789 1741 168 28 0 chr10 100289612 100289897 -45299391 + AluJo SINE Alu 1 293 -19 478 285 61 90 chr10 100289897 100290160 -45299128 - L1M4 LINE L1 -1357 4789 4545 392 281 110 75 chr10 100290172 100290545 -45298743 + L1ME LINE L1 5434 5819 -345 567 198 30 0 chr10 100290785 100290886 -45298402 + AluJo SINE Alu 22 125 -187 2146 134 0 0 chr10 100290914 100291219 -45298069 + AluSx SINE Alu 1 305 -7 1162 248 128 10 chr10 100291811 100292194 -45297094 + MLT1J1 LTR MaLR 1 428 -18 1306 253 93 6 chr10 100292806 100293170 -45296118 + LTR16A LTR ERVL 21 416 -34 776 201 83 121 chr10 100293771 100294169 -45295119 - MLT1B LTR MaLR -2 388 6 6284 197 30 29 chr10 100294174 100295539 -45293749 - MLT1C-int LTR MaLR 0 1371 6 1225 192 20 8 chr10 100295546 100295796 -45293492 - MLT1C LTR MaLR -2 465 213 568 252 71 6 chr10 100296102 100296360 -45292928 - L1M4 LINE L1 -2378 3768 3497 323 255 96 11 chr10 100296368 100296462 -45292826 + L1M4 LINE L1 3823 3924 -2222 2063 129 0 13 chr10 100296463 100296774 -45292514 + AluSg SINE Alu 1 307 -3 1041 167 0 22 chr10 100296881 100297061 -45292227 + AluJo SINE Alu 135 310 -2 327 336 143 25 chr10 100297065 100297303 -45291985 + L1M4 LINE L1 4027 4292 -1854 466 140 0 65 chr10 100297441 100297548 -45291740 - L1MC5 LINE L1 -54 7907 7808 611 271 115 11 chr10 100297835 100298201 -45291087 + L1M4 LINE L1 4415 4818 -1328 225 256 64 8 chr10 100298317 100298442 -45290846 + L1M4 LINE L1 4967 5098 -1048 403 290 20 5 chr10 100298501 100298701 -45290587 + L1M4 LINE L1 5190 5392 -754 544 204 25 21 chr10 100298703 100298848 -45290440 + MLT1A1 LTR MaLR 1 150 -215 523 116 0 12 chr10 100298981 100299067 -45290221 - L1MA3 LINE L1 0 6305 6221 1795 84 36 18 chr10 100299228 100299503 -45289785 - L1MA2 LINE L1 -18 6286 6007 599 167 22 51 chr10 100299504 100299642 -45289646 + MLT1A1 LTR MaLR 228 361 -4 1260 163 48 5 chr10 100299679 100299888 -45289400 - AluJo SINE Alu -8 304 87 1265 119 0 20 chr10 100299910 100300112 -45289176 - Tigger1 DNA MER2_type 0 2418 2221 21469 140 59 18 chr10 100300115 100303103 -45286185 + L1MA3 LINE L1 16 2880 -4844 2424 80 0 0 chr10 100303103 100303403 -45285885 + AluSq SINE Alu 1 300 -13 21469 140 59 18 chr10 100303403 100304990 -45284298 + L1MA3 LINE L1 2880 4401 -3323 2428 67 6 10 chr10 100304990 100305302 -45283986 + AluY SINE Alu 1 311 0 21469 140 59 18 chr10 100305302 100306255 -45283033 + L1MA3 LINE L1 4401 5314 -2410 1470 201 34 27 chr10 100306255 100306553 -45282735 + AluJo SINE Alu 1 300 -12 21469 140 59 18 chr10 100306553 100307481 -45281807 + L1MA3 LINE L1 5314 6203 -1521 2190 117 0 0 chr10 100307481 100307789 -45281499 + AluSx SINE Alu 5 312 0 21469 140 59 18 chr10 100307789 100308724 -45280564 + L1MA3 LINE L1 6203 7724 0 2104 121 35 109 chr10 100308740 100309228 -45280060 - Tigger1 DNA MER2_type -182 2236 1785 453 177 42 52 chr10 100309232 100309328 -45279960 - FRAM SINE Alu -12 164 70 863 187 39 39 chr10 100309328 100309558 -45279730 - Charlie3 DNA MER1_type -2480 230 1 4348 131 28 3 chr10 100309558 100310267 -45279021 - Tigger1 DNA MER2_type -1493 925 199 180 0 0 0 chr10 100310940 100310960 -45278328 + (CAA)n Simple_repeat Simple_repeat 2 21 0 2306 98 0 0 chr10 100314459 100314756 -45274532 - AluSg SINE Alu -13 297 1 539 298 242 19 chr10 100315149 100315525 -45273763 + L3 LINE CR1 1050 1509 -68 734 150 8 15 chr10 100316218 100316351 -45272937 + AluJb SINE Alu 3 134 -178 1473 171 65 4 chr10 100316352 100316615 -45272673 + AluJb SINE Alu 1 279 -33 325 276 51 0 chr10 100317200 100317298 -45271990 - L2 LINE L2 -3 3310 3208 2099 108 0 24 chr10 100317760 100318047 -45271241 - AluSq SINE Alu -33 280 1 198 103 0 0 chr10 100319017 100319046 -45270242 + (T)n Simple_repeat Simple_repeat 1 29 0 315 345 35 17 chr10 100320576 100320692 -45268596 - L2 LINE L2 -5 3267 3150 2364 74 0 7 chr10 100320697 100320996 -45268292 + AluY SINE Alu 2 298 -13 622 283 228 18 chr10 100321042 100321642 -45267646 - L2 LINE L2 -67 3246 2531 505 291 158 0 chr10 100321676 100321834 -45267454 - L2 LINE L2 -1037 2277 2095 508 208 8 33 chr10 100321855 100321975 -45267313 + L2 LINE L2 2339 2455 -859 2566 44 0 0 chr10 100322368 100322666 -45266622 + AluY SINE Alu 1 298 -13 235 284 37 99 chr10 100322666 100322824 -45266464 + L2 LINE L2 2584 2731 -583 202 208 21 42 chr10 100322986 100323034 -45266254 - L2 LINE L2 -35 3278 3232 715 131 77 8 chr10 100323084 100323214 -45266074 + AluSq/x SINE Alu 1 139 -174 494 252 91 65 chr10 100323394 100323695 -45265593 + L1MC4a LINE L1 5608 5410 -711 1815 166 16 23 chr10 100323695 100324003 -45265285 + AluJo SINE Alu 1 306 -6 494 252 91 65 chr10 100324003 100324255 -45265033 + L1MC4a LINE L1 5409 5653 -468 273 342 9 26 chr10 100325009 100325123 -45264165 - L2 LINE L2 -37 3276 3165 474 246 149 0 chr10 100325125 100325239 -45264049 + MER5B DNA MER1_type 3 133 -45 270 195 0 91 chr10 100326003 100326080 -45263208 + MIR SINE MIR 118 187 -75 31 0 0 0 chr10 100326124 100326155 -45263133 + AT_rich Low_complexity Low_complexity 1 31 0 275 278 98 38 chr10 100326523 100326656 -45262632 - MIR3 SINE MIR -58 150 10 272 225 0 28 chr10 100327003 100327074 -45262214 + Tigger5 DNA MER2_type 2250 2318 -5 409 209 12 0 chr10 100327204 100327290 -45261998 + Tigger5 DNA MER2_type 2237 2323 0 222 206 0 33 chr10 100327351 100327443 -45261845 + (CA)n Simple_repeat Simple_repeat 2 90 0 291 305 13 26 chr10 100327468 100327549 -45261739 - L1M4 LINE L1 -2216 3930 3850 2293 107 0 10 chr10 100327549 100327849 -45261439 - AluSg SINE Alu -13 297 1 291 305 13 26 chr10 100327849 100327918 -45261370 - L1M4 LINE L1 -2296 3850 3782 1040 167 56 0 chr10 100328612 100328810 -45260478 + MER20 DNA MER1_type 1 209 -10 466 319 28 22 chr10 100328823 100329005 -45260283 - LTR33 LTR ERVL -306 215 33 390 259 106 8 chr10 100329132 100329532 -45259756 - L1M4 LINE L1 -599 5585 5127 901 57 0 0 chr10 100329575 100329681 -45259607 + AluY SINE Alu 192 297 -14 340 297 183 40 chr10 100329710 100330033 -45259255 - L1M4 LINE L1 -1089 5057 4689 255 202 131 0 chr10 100330753 100330837 -45258451 - HAL1 LINE L1 -901 1606 1512 356 199 146 12 chr10 100331048 100331219 -45258069 - L1MEd LINE L1 -5000 1119 926 319 226 71 12 chr10 100331881 100331965 -45257323 - L2 LINE L2 0 3272 3184 341 237 86 0 chr10 100331972 100332065 -45257223 - MER5C DNA MER1_type -5 319 219 449 252 8 25 chr10 100332074 100332193 -45257095 - MER5C DNA MER1_type -207 117 1 789 190 34 62 chr10 100335901 100336158 -45253130 + L1MC4 LINE L1 6242 6358 -1 23 68 0 0 chr10 100336493 100336537 -45252751 + AT_rich Low_complexity Low_complexity 1 44 0 664 331 70 35 chr10 100336771 100337267 -45252021 + L2 LINE L2 2490 3043 -229 821 238 6 6 chr10 100337711 100337883 -45251405 + MER5B DNA MER1_type 7 178 0 766 229 6 24 chr10 100337909 100338075 -45251213 + MER5A DNA MER1_type 27 189 0 254 307 23 0 chr10 100338533 100338621 -45250667 + MIR SINE MIR 173 262 0 2345 98 0 10 chr10 100339381 100339687 -45249601 - AluSx SINE Alu -9 303 1 659 139 0 0 chr10 100342960 100343068 -45246220 + FLAM_C SINE Alu 35 142 -1 2211 94 19 13 chr10 100343484 100343792 -45245496 - AluSp SINE Alu -3 310 1 912 164 159 17 chr10 100343804 100344036 -45245252 - L1MD3 LINE L1 -1 7994 7730 2302 89 0 10 chr10 100345894 100346196 -45243092 - AluY SINE Alu -12 299 1 2474 81 0 0 chr10 100346215 100346525 -45242763 - AluY SINE Alu -1 310 1 227 257 27 167 chr10 100346817 100347039 -45242249 - MIR3 SINE MIR -6 202 12 2344 89 3 3 chr10 100347733 100348035 -45241253 - AluSq SINE Alu -11 302 1 2277 86 3 10 chr10 100348084 100348387 -45240901 - AluSx SINE Alu -11 301 1 213 240 0 0 chr10 100349155 100349205 -45240083 + T-rich Low_complexity Low_complexity 1 50 0 2192 100 3 3 chr10 100349334 100349634 -45239654 + AluSq SINE Alu 1 300 -13 23 0 0 0 chr10 100350147 100350170 -45239118 + AT_rich Low_complexity Low_complexity 1 23 0 1056 143 5 54 chr10 100350260 100350463 -45238825 + MER46A DNA MER2_type 44 236 0 2035 109 46 20 chr10 100350817 100351121 -45238167 + AluSx SINE Alu 1 312 0 655 292 76 28 chr10 100351342 100351592 -45237696 - MIR SINE MIR 0 262 1 24 53 0 0 chr10 100352351 100352389 -45236899 + AT_rich Low_complexity Low_complexity 1 38 0 195 279 44 29 chr10 100353301 100353369 -45235919 + MIR3 SINE MIR 92 160 -48 1923 167 39 21 chr10 100354932 100355315 -45233973 + MLT1B LTR MaLR 1 390 0 1772 168 34 3 chr10 100355681 100355979 -45233309 - AluJb SINE Alu -5 307 1 24 32 0 0 chr10 100356856 100356887 -45232401 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr10 100357430 100357451 -45231837 + AT_rich Low_complexity Low_complexity 1 21 0 2050 145 3 0 chr10 100358105 100358409 -45230879 - AluSx SINE Alu -5 307 3 385 285 223 0 chr10 100358564 100358694 -45230594 + MER5A DNA MER1_type 30 188 -1 514 212 45 3 chr10 100358703 100358835 -45230453 - MER5A DNA MER1_type 0 189 15 768 148 0 2 chr10 100358878 100359134 -45230154 + AluSx SINE Alu 1 305 -5 343 210 99 0 chr10 100359145 100359226 -45230062 + MER105 DNA DNA 112 200 -4 2236 57 11 4 chr10 100359304 100359604 -45229684 + AluSq SINE Alu 1 302 0 267 277 18 36 chr10 100359770 100359882 -45229406 - MER5A DNA MER1_type -40 149 40 252 0 0 0 chr10 100360405 100360433 -45228855 + (A)n Simple_repeat Simple_repeat 1 28 0 1324 120 0 21 chr10 100360702 100360894 -45228394 - AluSx SINE Alu -122 190 3 413 300 29 29 chr10 100361900 100362040 -45227248 + MIR3 SINE MIR 55 194 -14 340 253 59 24 chr10 100362079 100362249 -45227039 + L1P LINE L1 4962 5137 -1009 616 109 0 0 chr10 100362342 100362434 -45226854 + AluSp/q SINE Alu 216 307 -6 288 0 0 0 chr10 100362436 100362468 -45226820 + (CA)n Simple_repeat Simple_repeat 2 33 0 1856 127 68 0 chr10 100362561 100362880 -45226408 + AluSq SINE Alu 1 339 0 2230 122 0 3 chr10 100362880 100363191 -45226097 + AluSg SINE Alu 1 310 0 259 245 132 53 chr10 100363408 100363579 -45225709 + L1ME2 LINE L1 5504 5689 -432 245 268 28 28 chr10 100363782 100363853 -45225435 + MER5A DNA MER1_type 1 71 -118 1159 233 93 0 chr10 100365057 100365400 -45223888 + L1ME2 LINE L1 5763 6137 -27 354 262 89 74 chr10 100365459 100365661 -45223627 + L1MC4 LINE L1 7838 8042 0 610 212 9 0 chr10 100366024 100366137 -45223151 - MER81 DNA DNA 0 114 1 192 244 22 0 chr10 100366638 100366683 -45222605 + L3b LINE CR1 1530 1575 -8 22 0 0 0 chr10 100366838 100366860 -45222428 + AT_rich Low_complexity Low_complexity 1 22 0 2389 81 0 0 chr10 100367951 100368247 -45221041 + AluSx SINE Alu 1 296 -16 21 0 0 0 chr10 100369171 100369192 -45220096 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr10 100369916 100369938 -45219350 + AT_rich Low_complexity Low_complexity 1 22 0 1722 204 170 67 chr10 100371735 100372127 -45217161 - L1ME2 LINE L1 -10 6154 5804 2016 114 70 18 chr10 100372127 100372468 -45216820 + MER46B DNA MER2_type 3 236 0 1722 204 170 67 chr10 100372468 100372715 -45216573 - L1ME2 LINE L1 -360 5804 5452 337 330 56 37 chr10 100372726 100372941 -45216347 - L3 LINE CR1 -30 1547 1329 1128 302 74 52 chr10 100372971 100373066 -45216222 - L3 LINE CR1 -387 1190 1099 1741 173 3 7 chr10 100373066 100373349 -45215939 + AluJb SINE Alu 1 282 -30 267 104 0 0 chr10 100373353 100373401 -45215887 + (CAAAC)n Simple_repeat Simple_repeat 4 51 0 1128 302 74 52 chr10 100373401 100373959 -45215329 - L3 LINE CR1 -480 1097 517 2400 85 3 3 chr10 100374843 100375148 -45214140 + AluSx SINE Alu 3 307 -5 904 161 13 7 chr10 100375404 100375553 -45213735 - AluSg/x SINE Alu -16 296 147 1874 127 36 0 chr10 100375611 100375912 -45213376 + AluSx SINE Alu 1 311 0 29 0 0 0 chr10 100376229 100376258 -45213030 + AT_rich Low_complexity Low_complexity 1 29 0 228 353 0 0 chr10 100376392 100376460 -45212828 + L2 LINE L2 2561 2628 -686 272 367 33 8 chr10 100376656 100376776 -45212512 + L2 LINE L2 2925 3047 -225 2163 110 20 0 chr10 100377137 100377437 -45211851 + AluSx SINE Alu 1 306 -6 25 51 0 0 chr10 100378325 100378364 -45210924 + AT_rich Low_complexity Low_complexity 1 39 0 1861 152 0 4 chr10 100379638 100379915 -45209373 + AluJb SINE Alu 3 278 -34 380 169 0 0 chr10 100380833 100380892 -45208396 - Tigger4(Zombi) DNA MER2_type 0 2731 2673 21 0 0 0 chr10 100381479 100381500 -45207788 + AT_rich Low_complexity Low_complexity 1 21 0 2513 69 0 0 chr10 100382220 100382525 -45206763 + AluY SINE Alu 1 305 -6 907 186 128 25 chr10 100382695 100382969 -45206319 - MER33 DNA MER1_type 0 324 23 246 314 38 19 chr10 100383447 100383552 -45205736 + L2 LINE L2 2555 2661 -653 6027 138 104 5 chr10 100383583 100383905 -45205383 - Tigger3b DNA MER2_type -1797 1231 942 203 61 30 0 chr10 100383905 100383938 -45205350 + (TGAG)n Simple_repeat Simple_repeat 1 34 0 6027 138 104 5 chr10 100383938 100384735 -45204553 - Tigger3b DNA MER2_type -2086 942 1 214 299 149 30 chr10 100385001 100385135 -45204153 + L2 LINE L2 3159 3308 -5 2480 60 3 3 chr10 100386389 100386690 -45202598 - AluY SINE Alu -10 301 1 2341 81 10 10 chr10 100387244 100387554 -45201734 + AluSg SINE Alu 1 308 -2 212 205 0 0 chr10 100387554 100387593 -45201695 + GA-rich Low_complexity Low_complexity 2 180 0 2223 83 0 21 chr10 100387660 100387950 -45201338 + AluY SINE Alu 1 284 -27 204 0 0 36 chr10 100387950 100387978 -45201310 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1088 140 0 0 chr10 100388110 100388267 -45201021 + AluSg/x SINE Alu 125 281 -31 23 0 0 0 chr10 100388267 100388290 -45200998 + AT_rich Low_complexity Low_complexity 1 23 0 1020 260 180 11 chr10 100388291 100388668 -45200620 - Zaphod DNA AcHobo -3590 441 1 316 59 39 0 chr10 100388988 100389039 -45200249 + (CAAAA)n Simple_repeat Simple_repeat 2 54 0 1548 171 47 37 chr10 100389051 100389350 -45199938 + AluJo SINE Alu 1 302 -10 314 244 151 0 chr10 100389436 100389522 -45199766 - MIR SINE MIR -65 143 45 1765 107 172 14 chr10 100390493 100390784 -45198504 + MER1B DNA MER1_type 1 337 0 584 304 79 31 chr10 100390784 100391011 -45198277 + MIR SINE MIR 21 258 -4 1521 140 36 4 chr10 100391108 100391387 -45197901 - AluSx SINE Alu -10 302 15 255 225 22 11 chr10 100391588 100391677 -45197611 + L1MC4 LINE L1 6614 6703 -1339 243 215 0 43 chr10 100391608 100391701 -45197587 - L1MC4 LINE L1 -1339 6703 6615 * 340 130 29 0 chr10 100391702 100391771 -45197517 + (TA)n Simple_repeat Simple_repeat 1 71 0 2406 61 0 14 chr10 100391771 100392065 -45197223 - AluY SINE Alu -21 290 1 1080 104 0 0 chr10 100392065 100392200 -45197088 - AluSq/x SINE Alu -177 135 1 2926 219 41 65 chr10 100392200 100392787 -45196501 + Zaphod DNA AcHobo 1612 2170 -1861 2813 116 24 16 chr10 100392787 100393053 -45196235 - L1PA13 LINE L1 -2 6161 5889 4072 186 39 53 chr10 100393053 100394020 -45195268 + LTR13 LTR ERVK 1 954 0 2813 116 24 16 chr10 100394020 100394176 -45195112 - L1PA13 LINE L1 -274 5889 5736 2926 219 41 65 chr10 100394176 100394517 -45194771 + Zaphod DNA AcHobo 2170 2518 -1513 364 83 0 0 chr10 100394525 100394573 -45194715 - MER33 DNA MER1_type -1 362 315 1652 187 53 0 chr10 100394573 100394857 -45194431 - AluJb SINE Alu -9 303 5 250 324 22 89 chr10 100394995 100395220 -45194068 - LTR16B LTR ERVL -217 247 38 685 253 172 5 chr10 100395381 100395579 -45193709 + MIR SINE MIR 19 249 -13 293 320 144 40 chr10 100395632 100395717 -45193571 + L3b LINE CR1 1247 1322 -261 2072 110 48 0 chr10 100395717 100396008 -45193280 + AluY SINE Alu 1 305 -6 293 320 144 40 chr10 100396008 100396200 -45193088 + L3b LINE CR1 1322 1553 -30 382 292 39 62 chr10 100396467 100396772 -45192516 + L1M4 LINE L1 4362 4659 -1487 180 0 0 0 chr10 100397323 100397343 -45191945 + (TCC)n Simple_repeat Simple_repeat 3 22 0 706 98 10 10 chr10 100397349 100397443 -45191845 - AluY SINE Alu -3 308 212 2572 102 14 8 chr10 100397443 100397796 -45191492 - THE1A LTR MaLR 0 355 1 706 138 32 17 chr10 100397981 100398107 -45191181 - MLT1A1 LTR MaLR -70 326 170 1117 211 5 0 chr10 100398107 100398309 -45190979 - Zaphod DNA AcHobo -1301 2730 2528 716 162 110 0 chr10 100398309 100398445 -45190843 + MER33 DNA MER1_type 1 151 -173 300 221 0 29 chr10 100398450 100398518 -45190770 + L1MC4 LINE L1 6638 6703 -1339 2028 130 0 3 chr10 100398527 100398812 -45190476 - AluSx SINE Alu -28 284 1 387 196 116 0 chr10 100398824 100398936 -45190352 + MER33 DNA MER1_type 199 323 -40 252 193 0 18 chr10 100399087 100399144 -45190144 - L2 LINE L2 -573 2741 2686 336 245 21 32 chr10 100399247 100399341 -45189947 + MLT1A1 LTR MaLR 179 271 -94 * 677 158 3 5 chr10 100399331 100399450 -45189838 - MLT1A2 LTR MaLR -209 181 58 1165 110 0 0 chr10 100399459 100399614 -45189674 + AluSg/x SINE Alu 154 308 -4 1248 161 0 29 chr10 100399783 100400010 -45189278 + AluJb SINE Alu 86 306 0 620 282 83 22 chr10 100400027 100400438 -45188850 - L1 LINE L1 -1704 4442 4007 27 0 0 0 chr10 100400557 100400584 -45188704 + AT_rich Low_complexity Low_complexity 1 27 0 965 178 0 0 chr10 100400584 100400747 -45188541 + FRAM SINE Alu 1 158 -18 263 288 12 12 chr10 100400762 100400842 -45188446 - MER5A DNA MER1_type -75 114 35 247 264 23 101 chr10 100400932 100401061 -45188227 + MIR SINE MIR 96 214 -48 1127 269 106 46 chr10 100402341 100402821 -45186467 + L2 LINE L2 2805 3313 0 361 222 22 0 chr10 100403099 100403189 -45186099 - MIR SINE MIR -101 161 70 699 174 80 61 chr10 100404648 100404861 -45184427 - L1ME4a LINE L1 -3 6118 5902 2453 213 44 17 chr10 100407727 100408323 -45180965 + L1M4 LINE L1 2328 2939 -3207 2343 100 3 0 chr10 100408511 100408820 -45180468 + AluSg SINE Alu 1 310 0 1237 183 110 38 chr10 100408838 100408972 -45180316 + AluJb SINE Alu 1 124 -188 1940 112 25 0 chr10 100408972 100409248 -45180040 + AluSp SINE Alu 20 302 -11 2319 94 3 22 chr10 100409250 100409569 -45179719 + AluSq SINE Alu 1 313 0 1237 183 110 38 chr10 100409569 100409721 -45179567 + AluJb SINE Alu 124 311 -1 2547 65 0 0 chr10 100409726 100410033 -45179255 + AluY SINE Alu 2 308 -3 355 233 0 0 chr10 100410046 100410136 -45179152 + L1M4 LINE L1 2944 3033 -3113 191 121 30 0 chr10 100410138 100410171 -45179117 - MIR SINE MIR -132 76 43 664 231 120 63 chr10 100410233 100410609 -45178679 + MLT1J LTR MaLR 2 447 -64 3277 213 14 15 chr10 100410609 100411263 -45178025 - MER82 DNA MER2_type 0 653 1 664 231 120 63 chr10 100411263 100411305 -45177983 + MLT1J LTR MaLR 447 485 -26 329 163 175 12 chr10 100411379 100411459 -45177829 - LTR33 LTR ERVL 0 521 429 1672 219 91 16 chr10 100411474 100411904 -45177384 + MLT1C LTR MaLR 6 467 0 1157 284 24 41 chr10 100411908 100412327 -45176961 - LTR33 LTR ERVL -109 412 1 327 104 143 78 chr10 100412327 100412399 -45176889 + MER104 DNA Tc2 29 105 -75 1297 147 0 0 chr10 100412400 100412591 -45176697 - AluSg/x SINE Alu -15 297 107 865 157 41 0 chr10 100413095 100413242 -45176046 + AluJb SINE Alu 145 297 -15 841 162 27 87 chr10 100413255 100413440 -45175848 + FAM SINE Alu 1 174 -1 252 59 0 0 chr10 100415463 100415497 -45173791 + (TC)n Simple_repeat Simple_repeat 1 34 0 2237 87 7 0 chr10 100416559 100416846 -45172442 + AluSp SINE Alu 1 289 -24 933 114 0 30 chr10 100416879 100417011 -45172277 + AluSq/x SINE Alu 9 136 -177 2550 59 0 0 chr10 100417011 100417316 -45171972 + AluY SINE Alu 1 305 -6 2034 138 0 7 chr10 100417958 100418254 -45171034 + AluSx SINE Alu 1 294 -18 1451 248 110 31 chr10 100419245 100419728 -45169560 - MER21B LTR ERV1 -49 814 294 764 163 47 0 chr10 100420157 100420286 -45169002 + AluJo SINE Alu 2 136 -176 1351 156 91 47 chr10 100420899 100421196 -45168092 + AluJb SINE Alu 3 312 0 305 143 0 0 chr10 100421246 100421295 -45167993 - AluS SINE Alu -20 280 232 213 39 0 0 chr10 100422011 100422037 -45167251 + (A)n Simple_repeat Simple_repeat 1 26 0 215 302 130 30 chr10 100422374 100422543 -45166745 - L2 LINE L2 0 3313 3128 2002 96 4 0 chr10 100422621 100422882 -45166406 + AluSp SINE Alu 49 310 -3 639 212 38 30 chr10 100423779 100423911 -45165377 - FLAM_A SINE Alu 0 133 1 1993 225 91 51 chr10 100423924 100424172 -45165116 - L1M1 LINE L1 -4246 3320 3083 1251 207 134 36 chr10 100424172 100424447 -45164841 + AluJo SINE Alu 1 302 0 1993 225 91 51 chr10 100424447 100424516 -45164772 - L1M1 LINE L1 -4483 3083 3018 2038 108 14 0 chr10 100424516 100424793 -45164495 + AluSq SINE Alu 30 310 -3 1993 225 91 51 chr10 100424793 100425251 -45164037 - L1M1 LINE L1 -4548 3018 2533 248 286 41 20 chr10 100425293 100425324 -45163964 - MIR SINE MIR -1 261 232 1568 186 13 33 chr10 100425324 100425484 -45163804 - AluJo SINE Alu -17 295 142 2425 86 0 0 chr10 100425484 100425786 -45163502 - AluY SINE Alu -9 302 1 1568 186 13 33 chr10 100425786 100425926 -45163362 - AluJo SINE Alu -170 142 1 248 286 41 20 chr10 100425926 100425992 -45163296 - MIR SINE MIR -30 232 162 241 264 0 0 chr10 100425993 100426046 -45163242 + MER46C DNA MER2_type 1 53 -285 627 172 20 0 chr10 100426061 100426160 -45163128 + FLAM_A SINE Alu 19 119 -23 889 250 9 5 chr10 100426167 100426387 -45162901 + MER46C DNA MER2_type 85 305 -33 295 272 62 0 chr10 100426424 100426505 -45162783 - MIR SINE MIR -103 159 74 500 281 121 5 chr10 100426528 100426752 -45162536 - MIR SINE MIR -10 252 3 319 308 33 0 chr10 100426837 100426928 -45162360 + L2 LINE L2 2702 2795 -519 325 296 212 21 chr10 100426958 100427293 -45161995 + L2 LINE L2 2912 3310 -3 204 241 86 0 chr10 100427426 100427484 -45161804 + L2 LINE L2 3250 3312 -1 315 288 106 8 chr10 100427496 100427628 -45161660 + MIR SINE MIR 74 218 -44 231 267 57 38 chr10 100427694 100427799 -45161489 - MIR SINE MIR -46 216 110 186 152 0 65 chr10 100427816 100427862 -45161426 - L2 LINE L2 -556 2758 2716 1899 78 27 27 chr10 100427970 100428264 -45161024 + AluSx SINE Alu 1 294 -18 261 189 0 0 chr10 100431193 100431246 -45158042 - L1 LINE L1 -1109 5037 4985 2314 66 21 3 chr10 100431246 100431535 -45157753 - AluSx SINE Alu -18 294 1 2412 126 85 20 chr10 100432125 100432571 -45156717 - L1MA5 LINE L1 -6 6294 5820 2193 83 45 0 chr10 100434006 100434296 -45154992 - AluSc SINE Alu -6 303 1 2959 177 114 78 chr10 100434310 100435050 -45154238 - L1MB7 LINE L1 -10 6174 5362 254 111 0 0 chr10 100435050 100435086 -45154202 - U2 snRNA snRNA -152 36 1 2959 177 114 78 chr10 100435086 100435185 -45154103 - L1MB7 LINE L1 -822 5362 5268 1936 133 27 3 chr10 100435574 100435867 -45153421 - AluJo SINE Alu -12 300 1 22 35 0 0 chr10 100435879 100435908 -45153380 + AT_rich Low_complexity Low_complexity 1 29 0 417 129 0 0 chr10 100436852 100436922 -45152366 + (TG)n Simple_repeat Simple_repeat 2 71 0 24 0 0 0 chr10 100438075 100438099 -45151189 + AT_rich Low_complexity Low_complexity 1 24 0 10759 185 45 38 chr10 100438623 100439384 -45149904 + L1 LINE L1 2683 3437 -2709 1928 121 0 37 chr10 100439384 100439682 -45149606 + AluSx SINE Alu 3 289 -23 2469 75 7 0 chr10 100439691 100439999 -45149289 + AluSp SINE Alu 2 311 -2 10759 185 45 38 chr10 100439999 100441289 -45147999 + L1 LINE L1 3444 4768 -1378 1808 144 4 4 chr10 100441289 100441559 -45147729 + AluJo SINE Alu 21 290 -22 10759 185 45 38 chr10 100441559 100442170 -45147118 + L1 LINE L1 4768 5373 -773 1542 152 3 84 chr10 100443081 100443447 -45145841 - AluSx SINE Alu 0 341 1 1615 159 3 43 chr10 100444430 100444732 -45144556 + AluJo SINE Alu 3 292 -20 297 0 0 0 chr10 100444735 100444768 -45144520 + (TG)n Simple_repeat Simple_repeat 2 34 0 2222 92 0 0 chr10 100445484 100445768 -45143520 + AluSx SINE Alu 17 300 -12 229 278 0 130 chr10 100446247 100446311 -45142977 - MER5B DNA MER1_type -82 96 50 2175 107 0 3 chr10 100446311 100446611 -45142677 + AluSq SINE Alu 7 305 -8 229 278 0 130 chr10 100446611 100446654 -45142634 - MER5B DNA MER1_type -128 50 3 3789 178 53 58 chr10 100446978 100447239 -45142049 - L1MB8 LINE L1 -1 6177 5916 1709 174 57 21 chr10 100447239 100447573 -45141715 + MER7A DNA MER2_type 3 346 0 3789 178 53 58 chr10 100447573 100447718 -45141570 - L1MB8 LINE L1 -262 5916 5772 4265 138 22 6 chr10 100447718 100448442 -45140846 - L1MB2 LINE L1 0 6171 5436 3789 178 53 58 chr10 100448442 100448553 -45140735 - L1MB8 LINE L1 -406 5772 5662 2035 95 4 0 chr10 100448553 100448817 -45140471 + AluSp SINE Alu 40 304 -9 3789 178 53 58 chr10 100448817 100449263 -45140025 - L1MB8 LINE L1 -516 5662 5215 1950 149 3 13 chr10 100449263 100449578 -45139710 - AluSx SINE Alu 0 312 1 3789 178 53 58 chr10 100449578 100450225 -45139063 - L1MB8 LINE L1 -963 5215 4583 2175 99 0 7 chr10 100450954 100451248 -45138040 + AluSg SINE Alu 1 292 -18 29 47 0 0 chr10 100451321 100451364 -45137924 + AT_rich Low_complexity Low_complexity 1 43 0 267 277 18 36 chr10 100452507 100452619 -45136669 - MER5A DNA MER1_type -40 149 40 234 0 0 0 chr10 100453144 100453170 -45136118 + (A)n Simple_repeat Simple_repeat 1 26 0 1337 115 0 21 chr10 100453439 100453631 -45135657 - AluSx SINE Alu -122 190 3 413 300 29 29 chr10 100454638 100454778 -45134510 + MIR3 SINE MIR 55 194 -14 340 253 59 24 chr10 100454817 100454987 -45134301 + L1P LINE L1 4962 5137 -1009 607 118 0 0 chr10 100455080 100455173 -45134115 + AluSp/q SINE Alu 216 308 -5 252 0 0 0 chr10 100455175 100455203 -45134085 + (CA)n Simple_repeat Simple_repeat 2 29 0 2195 108 0 3 chr10 100455296 100455603 -45133685 + AluSx SINE Alu 1 306 -6 207 0 0 0 chr10 100456597 100456620 -45132668 + (TG)n Simple_repeat Simple_repeat 2 24 0 * 284 0 28 0 chr10 100456619 100456655 -45132633 + (TA)n Simple_repeat Simple_repeat 1 37 0 214 336 88 36 chr10 100457488 100457625 -45131663 - MIR3 SINE MIR -18 190 47 1770 164 50 16 chr10 100458984 100459307 -45129981 + MER7A DNA MER2_type 14 345 -1 202 216 0 0 chr10 100459886 100459923 -45129365 + CT-rich Low_complexity Low_complexity 4 40 0 25 31 0 0 chr10 100459923 100459955 -45129333 + AT_rich Low_complexity Low_complexity 1 32 0 703 186 103 13 chr10 100459992 100460148 -45129140 - AluJ SINE Alu -14 298 129 1406 38 0 0 chr10 100460153 100460313 -45128975 + AluY SINE Alu 140 299 -12 664 173 0 31 chr10 100460314 100460441 -45128847 - AluJ SINE Alu -185 127 5 794 229 38 33 chr10 100462174 100462384 -45126904 - MER58A DNA MER1_type 0 224 14 1992 136 10 0 chr10 100464180 100464474 -45124814 + AluSx SINE Alu 1 297 -15 2159 129 28 25 chr10 100464826 100465189 -45124099 - THE1B LTR MaLR 0 364 1 2363 90 3 0 chr10 100465968 100466269 -45123019 - AluSp SINE Alu -11 302 1 902 237 92 25 chr10 100467203 100467519 -45121769 + MER46C DNA MER2_type 1 337 -1 215 275 14 29 chr10 100467735 100467804 -45121484 + MIR SINE MIR 48 115 -147 341 231 308 0 chr10 100467989 100468119 -45121169 - MIR SINE MIR 0 262 93 2834 7 0 0 chr10 100468119 100468425 -45120863 + AluYa5 SINE Alu 1 306 -5 2046 135 0 7 chr10 100469067 100469363 -45119925 + AluSx SINE Alu 1 294 -18 2456 234 78 55 chr10 100470354 100471131 -45118157 - MER21B LTR ERV1 -49 814 20 403 289 114 71 chr10 100471269 100471663 -45117625 - L2 LINE L2 -9 3263 2853 3583 104 52 4 chr10 100471788 100472348 -45116940 - L1MC1 LINE L1 -377 5956 5370 1633 161 36 15 chr10 100472348 100472677 -45116611 - L1MC1 LINE L1 -8 6325 5990 3490 127 23 3 chr10 100473320 100473888 -45115400 - L1PA13 LINE L1 0 6163 5585 247 225 14 42 chr10 100474383 100474454 -45114834 + Charlie4 DNA MER1_type 1888 1956 -5 314 299 52 0 chr10 100479489 100479503 -45109785 - L1MA10 LINE L1 0 6334 6321 3108 221 66 25 chr10 100479503 100480901 -45108387 - L1ME2 LINE L1 -11 6153 4702 2453 74 0 0 chr10 100481698 100481994 -45107294 + AluY SINE Alu 1 296 -15 314 164 0 0 chr10 100482912 100482973 -45106315 + L1MB7 LINE L1 6115 6175 -9 255 61 0 0 chr10 100483083 100483116 -45106172 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 2222 87 7 0 chr10 100485007 100485294 -45103994 + AluSp SINE Alu 1 289 -24 1879 136 0 40 chr10 100485327 100485459 -45103829 + AluSx SINE Alu 9 145 -167 2302 80 0 0 chr10 100485459 100485746 -45103542 + AluY SINE Alu 1 287 -24 411 38 0 0 chr10 100485746 100485799 -45103489 + (TA)n Simple_repeat Simple_repeat 1 53 0 1879 136 0 40 chr10 100485799 100485967 -45103321 + AluSx SINE Alu 143 298 -14 1857 151 3 17 chr10 100485973 100486271 -45103017 + AluJb SINE Alu 1 294 -18 260 87 0 0 chr10 100486289 100486335 -45102953 + LTR66 LTR ERVL 394 439 -171 435 230 163 51 chr10 100487157 100487335 -45101953 - L1 LINE L1 -1158 4988 4791 23 33 0 0 chr10 100487679 100487709 -45101579 + AT_rich Low_complexity Low_complexity 1 30 0 2012 109 50 3 chr10 100488522 100488805 -45100483 + AluSx SINE Alu 1 296 -16 181 214 54 71 chr10 100489512 100489568 -45099720 - MIR SINE MIR -95 113 59 2379 88 0 3 chr10 100489886 100490193 -45099095 + AluSg SINE Alu 1 306 -4 1870 127 9 67 chr10 100492318 100492649 -45096639 + AluSx SINE Alu 1 312 0 1486 143 45 66 chr10 100493116 100493259 -45096029 - L1ME1 LINE L1 -315 5851 5707 2160 115 0 38 chr10 100493259 100493572 -45095716 + AluSx SINE Alu 1 301 -11 1486 143 45 66 chr10 100493572 100493763 -45095525 - L1ME1 LINE L1 -459 5707 5524 2215 85 7 7 chr10 100493890 100494183 -45095105 - AluSp SINE Alu -19 294 2 242 172 35 0 chr10 100494325 100494383 -45094905 + L1ME3 LINE L1 5910 5969 -193 287 250 103 78 chr10 100494407 100494611 -45094677 + L1ME3 LINE L1 5962 6162 0 2023 107 21 3 chr10 100495045 100495335 -45093953 - AluSq SINE Alu -8 305 11 2852 248 79 39 chr10 100495447 100496322 -45092966 + L1MEc LINE L1 11 850 -5546 787 196 0 0 chr10 100496322 100496455 -45092833 + FLAM_C SINE Alu 1 133 0 2852 248 79 39 chr10 100496455 100496476 -45092812 + L1MEc LINE L1 850 869 -5527 198 0 0 0 chr10 100496476 100496498 -45092790 + (CA)n Simple_repeat Simple_repeat 2 23 0 2852 248 79 39 chr10 100496498 100496690 -45092598 + L1MEc LINE L1 869 1143 -5253 22 0 0 0 chr10 100497334 100497356 -45091932 + AT_rich Low_complexity Low_complexity 1 22 0 2352 78 7 0 chr10 100497358 100497652 -45091636 + AluSg SINE Alu 1 296 -14 4651 145 55 24 chr10 100497684 100498735 -45090553 - L1MA9 LINE L1 -106 6206 5131 991 164 69 5 chr10 100498739 100498928 -45090360 - MER46A DNA MER2_type -3 233 33 1802 166 0 10 chr10 100498956 100499252 -45090036 - AluJo SINE Alu -19 293 1 3499 122 40 113 chr10 100499256 100500104 -45089184 - L1MA9 LINE L1 -1016 5130 4345 3219 144 130 80 chr10 100500104 100500340 -45088948 - Charlie1a DNA MER1_type -1327 1434 1211 1528 140 15 33 chr10 100500340 100500611 -45088677 - AluJo SINE Alu -2 310 45 3219 144 130 80 chr10 100500611 100501304 -45087984 - Charlie1a DNA MER1_type -1550 1211 458 1175 221 90 62 chr10 100501564 100501692 -45087596 - Charlie1a DNA MER1_type -2355 406 283 2032 115 13 26 chr10 100501692 100502004 -45087284 - AluSx SINE Alu -4 308 1 1175 221 90 62 chr10 100502004 100502265 -45087023 - Charlie1a DNA MER1_type -2478 283 6 1765 172 0 17 chr10 100502828 100503130 -45086158 - AluJo SINE Alu -15 297 1 701 213 0 0 chr10 100504036 100504163 -45085125 + FLAM_A SINE Alu 1 127 -6 26 64 0 0 chr10 100504442 100504489 -45084799 + AT_rich Low_complexity Low_complexity 1 47 0 229 77 77 26 chr10 100504490 100504529 -45084759 - MIR SINE MIR -18 244 204 495 266 107 24 chr10 100504608 100504777 -45084511 - MIR SINE MIR -78 184 2 478 285 129 71 chr10 100504866 100505315 -45083973 - MLT1K LTR MaLR -51 537 63 23 33 0 0 chr10 100505637 100505667 -45083621 + AT_rich Low_complexity Low_complexity 1 30 0 217 47 47 23 chr10 100505901 100505944 -45083344 + (TTTTTA)n Simple_repeat Simple_repeat 2 45 0 406 294 105 49 chr10 100506098 100506384 -45082904 + L3 LINE CR1 975 1276 -301 27 0 0 0 chr10 100506550 100506577 -45082711 + AT_rich Low_complexity Low_complexity 1 27 0 406 336 0 8 chr10 100506656 100506775 -45082513 + L2 LINE L2 3194 3311 -2 291 314 118 0 chr10 100507007 100507109 -45082179 - MER102b DNA MER1_type 0 341 228 5618 150 31 18 chr10 100507634 100508629 -45080659 - L1MC2 LINE L1 -14 6330 5323 966 175 61 79 chr10 100508629 100508858 -45080430 - AluJo SINE Alu -6 306 82 404 58 58 0 chr10 100508858 100508927 -45080361 - L1M LINE L1 -1014 5330 5258 2001 136 10 0 chr10 100509442 100509737 -45079551 + AluSx SINE Alu 1 298 -14 2159 129 28 25 chr10 100510088 100510451 -45078837 - THE1B LTR MaLR 0 364 1 2375 89 3 0 chr10 100511229 100511531 -45077757 - AluSp SINE Alu -10 303 1 876 241 92 25 chr10 100512466 100512782 -45076506 + MER46C DNA MER2_type 1 337 -1 235 275 14 29 chr10 100512998 100513067 -45076221 + MIR SINE MIR 48 115 -147 243 244 71 3 chr10 100513252 100513379 -45075909 - MIR SINE MIR 0 262 93 2409 58 3 7 chr10 100513379 100513687 -45075601 + AluYa5 SINE Alu 1 307 -4 1870 127 9 67 chr10 100515814 100516145 -45073143 + AluSx SINE Alu 1 312 0 1486 143 45 66 chr10 100516613 100516756 -45072532 - L1ME1 LINE L1 -315 5851 5707 2136 119 0 39 chr10 100516756 100517068 -45072220 + AluSx SINE Alu 1 300 -12 1486 143 45 66 chr10 100517068 100517259 -45072029 - L1ME1 LINE L1 -459 5707 5524 714 170 0 0 chr10 100517518 100517630 -45071658 - AluSg/x SINE Alu -46 264 153 2250 119 0 0 chr10 100517726 100518028 -45071260 + AluSx SINE Alu 1 302 -10 1824 151 10 7 chr10 100519471 100519763 -45069525 - AluJo SINE Alu -19 293 1 335 219 146 10 chr10 100519880 100519976 -45069312 - MIR SINE MIR -79 183 75 1477 173 153 0 chr10 100519978 100520279 -45069009 - MER7A DNA MER2_type 0 346 2 2001 144 14 0 chr10 100521721 100522012 -45067276 - AluSx SINE Alu -17 295 1 21 36 0 0 chr10 100522164 100522192 -45067096 + AT_rich Low_complexity Low_complexity 1 28 0 682 279 176 37 chr10 100522253 100522633 -45066655 - L2 LINE L2 -5 3308 2876 216 0 0 0 chr10 100522742 100522766 -45066522 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1535 184 25 7 chr10 100522771 100523048 -45066240 - AluJo SINE Alu -30 282 1 216 313 27 45 chr10 100523246 100523328 -45065960 + MER5A DNA MER1_type 72 153 -36 2167 103 10 0 chr10 100523328 100523618 -45065670 - AluSx SINE Alu -19 293 1 216 313 27 45 chr10 100523618 100523647 -45065641 + MER5A DNA MER1_type 153 181 -8 215 250 103 52 chr10 100523689 100523805 -45065483 - L2 LINE L2 -30 3242 3121 355 286 18 36 chr10 100523856 100523968 -45065320 - L2 LINE L2 -244 3028 2919 1243 189 57 7 chr10 100524317 100524597 -45064691 - L1MB4 LINE L1 -8 6408 6115 2644 162 21 49 chr10 100524607 100525129 -45064159 - L1MB4 LINE L1 -387 6029 5519 817 138 15 0 chr10 100525129 100525259 -45064029 - FLAM_C SINE Alu -1 132 1 2644 162 21 49 chr10 100525259 100525364 -45063924 - L1MB4 LINE L1 -897 5519 5413 598 196 131 0 chr10 100525358 100525511 -45063777 - L1MB4 LINE L1 -4825 1559 1387 * 25 0 0 0 chr10 100525556 100525581 -45063707 + AT_rich Low_complexity Low_complexity 1 25 0 668 319 158 21 chr10 100526409 100526774 -45062514 + L3 LINE CR1 673 1119 -458 2403 81 0 10 chr10 100526774 100527081 -45062207 - AluY SINE Alu -7 304 1 668 319 158 21 chr10 100527081 100527191 -45062097 + L3 LINE CR1 1119 1213 -364 1650 196 17 3 chr10 100527659 100527955 -45061333 - AluJo SINE Alu -12 300 1 1548 211 58 0 chr10 100528186 100528494 -45060794 - MER68 LTR ERV1 -206 356 31 2048 125 14 0 chr10 100528643 100528931 -45060357 + AluSx SINE Alu 1 292 -20 1466 138 9 9 chr10 100528949 100529173 -45060115 - AluSx SINE Alu -88 224 1 190 174 87 43 chr10 100529294 100529340 -45059948 - MIR SINE MIR -12 250 203 854 150 0 0 chr10 100529640 100529767 -45059521 + FLAM_C SINE Alu 1 127 -6 21 0 0 0 chr10 100530672 100530693 -45058595 + AT_rich Low_complexity Low_complexity 1 21 0 2283 101 3 16 chr10 100530763 100531070 -45058218 + AluSx SINE Alu 1 303 -9 432 280 30 48 chr10 100531894 100532062 -45057226 + MIR3 SINE MIR 35 199 -9 273 279 254 50 chr10 100532632 100532833 -45056455 + MIR SINE MIR 21 262 0 263 318 53 33 chr10 100532847 100532998 -45056290 + L3 LINE CR1 722 875 -702 753 287 105 34 chr10 100533017 100533341 -45055947 + L3 LINE CR1 988 1334 -243 798 238 63 43 chr10 100533362 100533711 -45055577 + L1MC4 LINE L1 7687 8042 0 22 0 0 0 chr10 100533839 100533861 -45055427 + AT_rich Low_complexity Low_complexity 1 22 0 273 266 16 31 chr10 100535068 100535196 -45054092 + (TATATG)n Simple_repeat Simple_repeat 5 130 0 1334 175 143 4 chr10 100536695 100536947 -45052341 + AluJo SINE Alu 1 287 -25 2176 107 13 3 chr10 100537094 100537402 -45051886 - AluSq SINE Alu 0 313 3 369 288 50 73 chr10 100538096 100538225 -45051063 + L2 LINE L2 2456 2579 -735 4547 55 2 9 chr10 100538225 100538792 -45050496 + LTR6A LTR ERV1 1 563 -1 369 288 50 73 chr10 100538792 100538881 -45050407 + L2 LINE L2 2579 2669 -645 294 314 64 32 chr10 100538888 100539044 -45050244 + L2 LINE L2 2772 2932 -382 628 229 59 76 chr10 100539089 100539325 -45049963 - L2 LINE L2 -907 2407 2176 212 192 0 77 chr10 100539524 100539576 -45049712 - L2 LINE L2 -6 3266 3219 288 232 89 75 chr10 100539621 100539718 -45049570 + L1MD1 LINE L1 2322 2416 -3730 2016 133 0 7 chr10 100539718 100540020 -45049268 + AluSx SINE Alu 4 303 -9 288 232 89 75 chr10 100540020 100540213 -45049075 + L1MD1 LINE L1 2416 2612 -3534 2167 114 7 3 chr10 100540316 100540614 -45048674 - AluSq SINE Alu -14 299 1 325 192 85 77 chr10 100540621 100540751 -45048537 + L1MD1 LINE L1 2663 2793 -3353 374 200 123 48 chr10 100540759 100541050 -45048238 + L1MD1 LINE L1 4111 4535 -1611 22 56 0 0 chr10 100541059 100541095 -45048193 + AT_rich Low_complexity Low_complexity 1 36 0 2118 246 217 5 chr10 100541113 100542198 -45047090 + L1MC2 LINE L1 2311 3653 -2493 3004 169 107 19 chr10 100542220 100542234 -45047054 + MER44D DNA MER2_type 16 27 -2560 2163 94 6 64 chr10 100542234 100542562 -45046726 - AluSx SINE Alu -3 309 1 3004 169 107 19 chr10 100542562 100543181 -45046107 + MER44D DNA MER2_type 27 705 0 446 133 72 0 chr10 100543191 100543274 -45046014 + L1MC2 LINE L1 3651 3739 -2407 * 4022 160 68 85 chr10 100543247 100543400 -45045888 + L1MC2 LINE L1 5000 5154 -1190 1705 120 117 18 chr10 100543400 100543674 -45045614 + AluSx SINE Alu 1 301 -11 4022 160 68 85 chr10 100543674 100544744 -45044544 + L1MC2 LINE L1 5154 6206 -138 438 164 37 104 chr10 100544790 100544924 -45044364 + L1MC2 LINE L1 6199 6323 -21 463 49 0 30 chr10 100544934 100545160 -45044128 + AluY SINE Alu 1 298 -11 1930 137 44 3 chr10 100545174 100545467 -45043821 + AluSx SINE Alu 6 310 -2 3414 166 73 10 chr10 100545479 100546166 -45043122 + L1MD1 LINE L1 5304 6033 -209 1872 102 0 78 chr10 100546266 100546561 -45042727 + AluSx SINE Alu 29 300 -12 1487 235 114 32 chr10 100547007 100547505 -45041783 - L1ME3A LINE L1 -24 6140 5685 1791 164 106 17 chr10 100547505 100547865 -45041423 + MSTD LTR MaLR 1 392 -4 1487 235 114 32 chr10 100547865 100547980 -45041308 - L1ME3A LINE L1 -479 5685 5581 2219 97 10 7 chr10 100547980 100548278 -45041010 - AluSq SINE Alu -14 299 1 1487 235 114 32 chr10 100548278 100548315 -45040973 - L1ME3A LINE L1 -583 5581 5392 2155 117 0 23 chr10 100548477 100548784 -45040504 + AluSx SINE Alu 1 300 -12 267 54 0 0 chr10 100549073 100549110 -45040178 + (ATG)n Simple_repeat Simple_repeat 3 39 0 2204 86 7 0 chr10 100549110 100549390 -45039898 - AluSq SINE Alu -31 282 1 27 29 0 0 chr10 100549923 100549957 -45039331 + AT_rich Low_complexity Low_complexity 1 34 0 204 259 37 67 chr10 100551028 100551163 -45038125 + MER5B DNA MER1_type 32 162 -16 234 0 0 0 chr10 100553283 100553309 -45035979 + (TC)n Simple_repeat Simple_repeat 1 26 0 189 0 0 0 chr10 100553308 100553329 -45035959 + (CA)n Simple_repeat Simple_repeat 1 21 0 * 21 71 0 0 chr10 100553786 100553828 -45035460 + AT_rich Low_complexity Low_complexity 1 42 0 183 129 0 0 chr10 100554126 100554157 -45035131 + (T)n Simple_repeat Simple_repeat 1 31 0 22 0 0 0 chr10 100554863 100554885 -45034403 + AT_rich Low_complexity Low_complexity 1 22 0 180 0 0 0 chr10 100556978 100556998 -45032290 + (TAA)n Simple_repeat Simple_repeat 2 21 0 325 203 187 73 chr10 100557491 100557614 -45031674 + MIR SINE MIR 11 147 -115 185 293 43 64 chr10 100557734 100557922 -45031366 - L2 LINE L2 -250 3022 2839 2312 78 3 50 chr10 100558277 100558450 -45030838 - AluSx SINE Alu -7 305 152 2684 52 0 0 chr10 100558450 100558759 -45030529 - AluY SINE Alu -1 310 2 2312 78 3 50 chr10 100558759 100558905 -45030383 - AluSx SINE Alu -160 152 1 661 120 0 9 chr10 100558905 100559013 -45030275 - L1M4 LINE L1 -727 5451 5345 712 227 0 0 chr10 100559090 100559222 -45030066 + FLAM_A SINE Alu 1 132 -1 631 249 63 95 chr10 100559222 100559349 -45029939 + L1MC4a LINE L1 5387 5516 -605 2151 96 0 58 chr10 100559349 100559661 -45029627 - AluSq SINE Alu -19 294 1 631 249 63 95 chr10 100559661 100559982 -45029306 + L1MC4a LINE L1 5516 5819 -302 1628 158 83 0 chr10 100560677 100560942 -45028346 + AluJb SINE Alu 1 287 -25 904 189 14 57 chr10 100561233 100561445 -45027843 + L1MA1 LINE L1 14 216 -7349 6467 168 43 3 chr10 100561448 100563109 -45026179 + L1MA1 LINE L1 390 2219 -5346 3655 170 69 64 chr10 100563098 100563183 -45026105 + L1MA1 LINE L1 3789 3872 -3693 * 2038 118 3 14 chr10 100563183 100563472 -45025816 + AluSx SINE Alu 1 286 -26 432 55 0 0 chr10 100563472 100563527 -45025761 + (CATA)n Simple_repeat Simple_repeat 2 56 0 3655 170 69 64 chr10 100563527 100563968 -45025320 + L1MA1 LINE L1 3872 4324 -3241 2139 111 14 7 chr10 100563968 100564265 -45025023 + AluSq SINE Alu 5 303 -10 3655 170 69 64 chr10 100564265 100564655 -45024633 + L1MA1 LINE L1 4324 4711 -2854 1788 85 17 0 chr10 100564655 100564890 -45024398 + AluSg SINE Alu 60 298 -12 654 139 0 0 chr10 100564893 100564994 -45024294 + L1MA1 LINE L1 5279 5379 -2186 1897 140 32 7 chr10 100564994 100565273 -45024015 + AluSx SINE Alu 1 286 -26 7270 92 31 15 chr10 100565274 100566056 -45023232 + L1MA1 LINE L1 6393 7208 -513 2393 108 0 0 chr10 100566056 100566363 -45022925 + AluSq SINE Alu 1 307 -6 7270 92 31 15 chr10 100566363 100566868 -45022420 + L1MA1 LINE L1 7208 7703 -18 293 137 0 78 chr10 100566868 100566879 -45022409 + AluSg/x SINE Alu 126 136 -166 2076 141 3 13 chr10 100566879 100567183 -45022105 + AluSx SINE Alu 1 301 -11 293 137 0 78 chr10 100567183 100567222 -45022066 + AluSg/x SINE Alu 136 172 -130 2349 82 0 3 chr10 100568402 100568696 -45020592 + AluSc SINE Alu 1 293 -16 368 281 82 20 chr10 100569435 100569581 -45019707 + L3 LINE CR1 962 1116 -461 2135 126 0 19 chr10 100570123 100570440 -45018848 - AluSx SINE Alu -1 311 1 1709 183 0 10 chr10 100570731 100571026 -45018262 + AluJb SINE Alu 1 292 -20 503 202 101 0 chr10 100571209 100571298 -45017990 + FLAM_A SINE Alu 2 99 -43 312 137 0 0 chr10 100571304 100571355 -45017933 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 2259 111 0 16 chr10 100571682 100571998 -45017290 + AluSx SINE Alu 1 311 -1 62 14 0 0 chr10 100571998 100572067 -45017221 + AT_rich Low_complexity Low_complexity 1 69 0 2357 94 3 0 chr10 100572138 100572445 -45016843 + AluSp SINE Alu 1 308 -5 2414 90 3 0 chr10 100572456 100572768 -45016520 + AluSp SINE Alu 1 313 0 2118 123 0 3 chr10 100574335 100574619 -45014669 - AluSx SINE Alu -24 288 6 440 248 76 7 chr10 100575099 100575244 -45014044 - MER103 DNA DNA -2 164 10 24 32 0 0 chr10 100575249 100575280 -45014008 + AT_rich Low_complexity Low_complexity 1 31 0 2063 151 3 0 chr10 100575415 100575727 -45013561 + AluSq SINE Alu 1 313 0 342 0 0 0 chr10 100575991 100576029 -45013259 + (CA)n Simple_repeat Simple_repeat 2 39 0 184 328 16 33 chr10 100576049 100576110 -45013178 - MIR SINE MIR -133 75 16 2235 90 0 17 chr10 100576372 100576671 -45012617 + AluSg SINE Alu 3 296 -14 321 321 52 16 chr10 100577455 100577595 -45011693 - MIR SINE MIR -74 134 16 1919 140 33 3 chr10 100577959 100578259 -45011029 - AluJo SINE Alu -3 309 1 784 151 0 0 chr10 100578293 100578399 -45010889 + AluSq/x SINE Alu 2 107 -206 1304 143 11 114 chr10 100578399 100578672 -45010616 - AluJo SINE Alu -52 260 16 269 341 54 8 chr10 100578716 100578845 -45010443 + MIR3 SINE MIR 63 197 -11 24 32 0 0 chr10 100579005 100579036 -45010252 + AT_rich Low_complexity Low_complexity 1 31 0 870 156 0 8 chr10 100579038 100579166 -45010122 - FLAM_C SINE Alu -6 127 1 278 239 123 46 chr10 100579217 100579347 -45009941 - L2 LINE L2 -3 3310 3171 535 321 68 24 chr10 100579526 100579822 -45009466 - L2 LINE L2 -410 2904 2596 200 133 0 0 chr10 100579903 100579933 -45009355 - L2 LINE L2 -21 3251 3222 601 146 23 62 chr10 100580370 100580500 -45008788 + L1MB8 LINE L1 6053 6177 -1 1591 174 10 40 chr10 100581336 100581634 -45007654 - AluJo SINE Alu -23 289 1 399 179 12 54 chr10 100581675 100581843 -45007445 + GA-rich Low_complexity Low_complexity 5 165 0 1558 178 87 7 chr10 100582395 100582670 -45006618 + AluJb SINE Alu 1 297 -15 211 256 0 0 chr10 100582670 100582713 -45006575 + G-rich Low_complexity Low_complexity 1 43 0 231 88 0 0 chr10 100582727 100582761 -45006527 + (GGGGA)n Simple_repeat Simple_repeat 2 35 0 294 308 97 42 chr10 100583019 100583192 -45006096 - MIR SINE MIR -79 183 3 22 35 0 0 chr10 100583234 100583263 -45006025 + AT_rich Low_complexity Low_complexity 1 29 0 229 296 154 43 chr10 100583332 100583494 -45005794 - MIR SINE MIR -71 191 12 306 308 58 25 chr10 100584181 100584301 -45004987 - L2 LINE L2 -5 3267 3144 22 35 0 0 chr10 100584470 100584499 -45004789 + AT_rich Low_complexity Low_complexity 1 29 0 2456 59 0 23 chr10 100584839 100585143 -45004145 + AluY SINE Alu 1 297 -14 242 284 98 88 chr10 100585338 100585515 -45003773 - MER102b DNA MER1_type -1087 341 158 2303 72 3 23 chr10 100585515 100585819 -45003469 - AluY SINE Alu -13 298 1 242 284 98 88 chr10 100585819 100585926 -45003362 - MER102b DNA MER1_type -1270 158 54 315 0 0 0 chr10 100587185 100587220 -45002068 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2189 86 22 4 chr10 100587222 100587500 -45001788 - AluSx SINE Alu -29 283 1 2064 85 64 0 chr10 100588823 100589106 -45000182 + AluY SINE Alu 2 302 -9 2417 64 0 0 chr10 100589490 100589799 -44999489 - AluY SINE Alu 0 309 1 2354 109 0 3 chr10 100590517 100590830 -44998458 - AluSx SINE Alu 0 312 1 234 284 149 21 chr10 100591448 100591589 -44997699 + MIR SINE MIR 94 252 -10 1529 123 9 5 chr10 100593146 100593365 -44995923 - AluJb SINE Alu -10 302 83 197 231 0 0 chr10 100593982 100594021 -44995267 + L2 LINE L2 3262 3300 -13 2222 101 7 0 chr10 100594425 100594713 -44994575 + AluSg SINE Alu 1 290 -20 2181 106 0 3 chr10 100595179 100595486 -44993802 + AluSx SINE Alu 1 306 0 2190 119 10 0 chr10 100597418 100597721 -44991567 + AluSx SINE Alu 1 306 -6 2005 129 10 3 chr10 100598427 100598722 -44990566 - AluSq SINE Alu -16 297 1 2090 134 3 0 chr10 100598769 100599075 -44990213 - AluSq SINE Alu -6 307 1 2408 78 0 0 chr10 100599241 100599536 -44989752 + AluY SINE Alu 1 295 -16 297 0 0 0 chr10 100599729 100599762 -44989526 + (CA)n Simple_repeat Simple_repeat 2 34 0 195 169 42 0 chr10 100600503 100600574 -44988714 + (TA)n Simple_repeat Simple_repeat 1 74 0 1256 192 149 45 chr10 100600741 100600804 -44988484 - MER2 DNA MER2_type -5 340 285 1982 107 38 34 chr10 100600804 100601095 -44988193 - AluSx SINE Alu -20 292 1 1256 192 149 45 chr10 100601095 100601339 -44987949 - MER2 DNA MER2_type -60 285 1 2070 130 3 10 chr10 100601582 100601881 -44987407 + AluSx SINE Alu 1 297 -15 788 243 141 54 chr10 100601947 100602260 -44987028 - MER102b DNA MER1_type -1 340 1 471 200 19 119 chr10 100602700 100602800 -44986488 - MER103 DNA DNA -19 147 67 2354 106 3 0 chr10 100602800 100603112 -44986176 + AluSp SINE Alu 1 313 0 471 200 19 119 chr10 100603112 100603171 -44986117 - MER103 DNA DNA -99 67 4 1766 89 38 4 chr10 100603239 100603475 -44985813 - AluSp SINE Alu -23 290 47 2387 109 0 0 chr10 100603680 100603992 -44985296 - AluSx SINE Alu 0 312 1 445 162 0 0 chr10 100604136 100604204 -44985084 - AluJo SINE Alu -7 305 238 1140 163 0 0 chr10 100604206 100604372 -44984916 - AluJo SINE Alu -146 166 1 2074 107 20 33 chr10 100604492 100604792 -44984496 + AluSq SINE Alu 1 296 -17 1347 183 118 15 chr10 100604800 100605062 -44984226 + AluJo SINE Alu 1 289 -23 2368 94 0 7 chr10 100605187 100605496 -44983792 - AluSp SINE Alu -6 307 1 2539 62 0 0 chr10 100605507 100605811 -44983477 - AluY SINE Alu -7 304 1 2268 110 0 3 chr10 100606545 100606846 -44982442 + AluSx SINE Alu 1 300 -12 366 329 68 14 chr10 100607805 100607951 -44981337 + L2 LINE L2 3119 3272 0 285 257 129 7 chr10 100608247 100608387 -44980901 - MIR SINE MIR -10 252 96 316 222 14 0 chr10 100608972 100609044 -44980244 + MER103 DNA DNA 26 98 -68 2374 75 3 16 chr10 100609300 100609606 -44979682 - AluY SINE Alu -9 302 1 1006 151 12 24 chr10 100609819 100609985 -44979303 - FRAM SINE Alu -2 164 1 226 359 46 62 chr10 100610242 100610501 -44978787 + L2 LINE L2 2808 3062 -210 1105 120 24 0 chr10 100610636 100610803 -44978485 - AluSg/x SINE Alu -8 304 134 2221 132 0 0 chr10 100610803 100611113 -44978175 - AluSx SINE Alu -2 310 1 198 250 67 0 chr10 100611379 100611439 -44977849 - L2 LINE L2 -219 3053 2990 2420 106 0 0 chr10 100611453 100611810 -44977478 + AluSx SINE Alu 1 357 0 2282 95 7 0 chr10 100614177 100614472 -44974816 - AluY SINE Alu -14 297 1 374 321 24 36 chr10 100614893 100615058 -44974230 - MIR SINE MIR -48 214 52 1199 181 195 0 chr10 100616474 100616756 -44972532 + L1MB7 LINE L1 5835 6171 -13 2207 94 3 44 chr10 100617047 100617365 -44971923 - AluSx SINE Alu -7 305 1 217 333 0 0 chr10 100619399 100619459 -44969829 + MIR SINE MIR 30 89 -119 813 282 39 13 chr10 100619469 100619703 -44969585 - MIR SINE MIR -2 260 21 27 0 0 0 chr10 100619958 100619985 -44969303 + GC_rich Low_complexity Low_complexity 1 27 0 1873 134 0 0 chr10 100620097 100620372 -44968916 - AluSg SINE Alu -35 275 1 34 0 0 0 chr10 100621172 100621206 -44968082 + AT_rich Low_complexity Low_complexity 1 34 0 2466 80 0 0 chr10 100621942 100622242 -44967046 - AluSg1 SINE Alu -9 300 1 2521 63 0 3 chr10 100622245 100622548 -44966740 - AluY SINE Alu -7 304 3 740 234 62 31 chr10 100622717 100622943 -44966345 - MIR SINE MIR -4 258 26 216 0 0 0 chr10 100623044 100623068 -44966220 + (TTTTG)n Simple_repeat Simple_repeat 3 26 0 2249 96 0 0 chr10 100623070 100623352 -44965936 - AluSq SINE Alu -31 282 1 455 230 82 15 chr10 100623442 100623577 -44965711 + L1MC4 LINE L1 7512 7655 -387 1174 38 0 0 chr10 100624894 100625025 -44964263 + AluY SINE Alu 2 132 -179 1031 70 0 8 chr10 100625050 100625178 -44964110 + AluY SINE Alu 2 128 -183 285 51 0 0 chr10 100625178 100625217 -44964071 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 2381 81 7 0 chr10 100625223 100625532 -44963756 + AluY SINE Alu 1 311 0 2265 115 0 0 chr10 100625626 100625921 -44963367 - AluSx SINE Alu -17 295 1 2341 88 0 7 chr10 100625931 100626228 -44963060 - AluSc SINE Alu -14 295 1 221 102 68 0 chr10 100626259 100626318 -44962970 + (TA)n Simple_repeat Simple_repeat 2 64 0 459 231 19 0 chr10 100626353 100626473 -44962815 + L1MC4 LINE L1 7880 7995 0 213 333 0 0 chr10 100626955 100627015 -44962273 - L2 LINE L2 -40 3232 3173 202 345 73 18 chr10 100627661 100627771 -44961517 - L2 LINE L2 -213 3059 2944 476 273 71 49 chr10 100628331 100628555 -44960733 - MIR SINE MIR -15 247 12 204 40 0 0 chr10 100629356 100629381 -44959907 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 1994 144 0 10 chr10 100630645 100630944 -44958344 - AluJb SINE Alu -16 296 1 322 227 101 67 chr10 100631718 100631837 -44957451 + MIR3 SINE MIR 81 203 -5 435 274 99 25 chr10 100631877 100632078 -44957210 - L2 LINE L2 0 3313 3098 732 139 113 17 chr10 100632087 100632202 -44957086 + FLAM_C SINE Alu 2 127 -16 420 267 115 63 chr10 100632260 100632314 -44956974 - L2 LINE L2 -284 3029 2979 1908 156 0 10 chr10 100632314 100632622 -44956666 + AluSx SINE Alu 1 305 -7 420 267 115 63 chr10 100632622 100632758 -44956530 - L2 LINE L2 -334 2979 2829 1051 142 178 10 chr10 100633146 100633343 -44955945 + MER30 DNA MER1_type 1 230 0 6118 96 26 10 chr10 100633404 100634381 -44954907 + L1PA13 LINE L1 5128 6117 -46 1661 170 34 17 chr10 100634686 100634980 -44954308 + AluJo SINE Alu 7 305 -7 394 311 83 16 chr10 100635056 100635312 -44953976 + L2 LINE L2 2952 3185 -87 391 350 124 28 chr10 100636253 100636690 -44952598 + L3 LINE CR1 1022 1500 -77 280 193 0 18 chr10 100636731 100636788 -44952500 - MER58 DNA MER1_type -114 101 46 1090 189 76 18 chr10 100636814 100637089 -44952199 - MER33 DNA MER1_type -1 323 33 22903 57 5 0 chr10 100637534 100641094 -44948194 + L1PA6 LINE L1 2585 6154 0 1546 162 15 36 chr10 100641096 100641142 -44948146 + L1MA3 LINE L1 5008 5053 -1093 189 0 0 0 chr10 100641142 100641163 -44948125 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 1546 162 15 36 chr10 100641163 100641449 -44947839 + L1MA3 LINE L1 5053 5333 -813 2387 94 0 0 chr10 100641481 100641779 -44947509 - AluSg SINE Alu -12 298 1 2320 80 3 10 chr10 100642637 100642938 -44946350 + AluY SINE Alu 1 299 -12 5783 102 7 29 chr10 100643449 100643916 -44945372 + L1MA3 LINE L1 5324 5761 -544 2246 122 3 0 chr10 100643916 100644228 -44945060 + AluSp SINE Alu 1 313 0 5783 102 7 29 chr10 100644228 100644713 -44944575 + L1MA3 LINE L1 5761 6255 -50 2320 98 3 0 chr10 100644713 100645009 -44944279 + AluSg SINE Alu 1 297 -13 7879 16 0 0 chr10 100645009 100646564 -44942724 + L1PA3 LINE L1 4598 6154 -1 2580 55 0 0 chr10 100646657 100646968 -44942320 + AluY SINE Alu 1 311 0 253 240 93 0 chr10 100649007 100649082 -44940206 - L2 LINE L2 0 3313 3232 1970 152 23 0 chr10 100649183 100649485 -44939803 - AluJo SINE Alu -3 309 1 601 281 92 16 chr10 100649528 100649713 -44939575 + MIR SINE MIR 22 220 -42 2259 93 0 20 chr10 100650271 100650572 -44938716 + AluSq SINE Alu 5 299 -14 2084 137 0 0 chr10 100652094 100652386 -44936902 + AluJb SINE Alu 1 292 -20 252 299 48 100 chr10 100652490 100652721 -44936567 - L2 LINE L2 -77 3195 2977 634 287 162 68 chr10 100652747 100653594 -44935694 + L2 LINE L2 2348 3256 -16 2185 134 0 0 chr10 100653823 100654121 -44935167 - AluSx SINE Alu -14 298 1 471 285 44 15 chr10 100654664 100654801 -44934487 + MER5A DNA MER1_type 49 189 0 908 118 0 15 chr10 100655177 100655312 -44933976 - FLAM_C SINE Alu 0 133 1 241 215 248 66 chr10 100656341 100656462 -44932826 + MIR3 SINE MIR 33 175 -33 945 326 83 37 chr10 100656515 100657131 -44932157 + L2 LINE L2 2296 2939 -375 1048 157 27 17 chr10 100657162 100657394 -44931894 - L1MB8 LINE L1 -118 6053 5820 416 219 65 24 chr10 100657451 100657620 -44931668 + L1MC5 LINE L1 7750 7925 -36 187 224 56 39 chr10 100657628 100657775 -44931513 + L2 LINE L2 2988 3198 -115 2227 106 17 0 chr10 100658424 100658726 -44930562 + AluSx SINE Alu 1 307 -5 2058 138 21 0 chr10 100659853 100660143 -44929145 + AluSx SINE Alu 1 296 -16 205 186 0 23 chr10 100660586 100660629 -44928659 + CT-rich Low_complexity Low_complexity 1 42 0 29 28 0 0 chr10 100660850 100660886 -44928402 + AT_rich Low_complexity Low_complexity 1 36 0 188 332 251 40 chr10 100660940 100661187 -44928101 - L2 LINE L2 -10 3262 2964 21 21 0 64 chr10 100661619 100661666 -44927622 + AT_rich Low_complexity Low_complexity 1 44 0 30 27 0 0 chr10 100661841 100661878 -44927410 + AT_rich Low_complexity Low_complexity 1 37 0 697 185 134 6 chr10 100662392 100662549 -44926739 - MER69A DNA AcHobo 0 177 1 231 254 0 0 chr10 100662872 100662927 -44926361 + (CA)n Simple_repeat Simple_repeat 2 56 0 2060 130 0 3 chr10 100663900 100664211 -44925077 + AluSx SINE Alu 1 310 0 2407 104 0 0 chr10 100664310 100664619 -44924669 + AluSx SINE Alu 1 309 -3 2303 87 7 13 chr10 100664865 100665165 -44924123 - AluSx SINE Alu -14 298 1 1455 158 73 0 chr10 100665817 100666064 -44923224 - AluSx SINE Alu -19 293 29 2236 102 0 34 chr10 100666169 100666491 -44922797 - AluSq SINE Alu 0 313 3 238 259 0 0 chr10 100666566 100666620 -44922668 - MIR SINE MIR -10 252 199 1968 111 8 0 chr10 100666620 100666881 -44922407 - AluSg SINE Alu -47 263 1 579 237 32 13 chr10 100667144 100667300 -44921988 + L1ME3A LINE L1 5961 6119 -51 1700 152 48 3 chr10 100667766 100668076 -44921212 - L1MC1 LINE L1 0 6333 6010 2103 86 4 0 chr10 100668078 100668346 -44920942 + AluSq SINE Alu 6 274 -39 213 39 0 0 chr10 100668802 100668828 -44920460 + (TTTTTG)n Simple_repeat Simple_repeat 3 28 0 661 219 186 14 chr10 100669015 100669225 -44920063 - MIR SINE MIR 0 262 17 1389 228 71 18 chr10 100669228 100669623 -44919665 - L1ME1 LINE L1 -12 6154 5739 13126 136 32 34 chr10 100669881 100670086 -44919202 - Tigger1 DNA MER2_type 0 2418 2214 899 182 6 18 chr10 100670086 100670251 -44919037 + FRAM SINE Alu 1 163 -3 13126 136 32 34 chr10 100670251 100671023 -44918265 - Tigger1 DNA MER2_type -204 2214 1442 2457 95 0 0 chr10 100671023 100671329 -44917959 - AluSx SINE Alu -6 306 1 13126 136 32 34 chr10 100671329 100672549 -44916739 - Tigger1 DNA MER2_type -976 1442 220 2083 114 0 7 chr10 100672549 100672854 -44916434 + AluSx SINE Alu 5 307 0 13126 136 32 34 chr10 100672854 100673073 -44916215 - Tigger1 DNA MER2_type -2198 220 2 2533 92 2 72 chr10 100673392 100673712 -44915576 + THE1C LTR MaLR 1 342 -33 2335 112 0 3 chr10 100673712 100674017 -44915271 - AluSq SINE Alu -9 304 1 2533 92 2 72 chr10 100674017 100674057 -44915231 + THE1C LTR MaLR 342 334 -41 2343 113 0 0 chr10 100674057 100674359 -44914929 - AluSq SINE Alu -11 302 1 2533 92 2 72 chr10 100674359 100674400 -44914888 + THE1C LTR MaLR 333 375 0 186 299 195 0 chr10 100674580 100674657 -44914631 - L3 LINE CR1 -165 1412 1321 314 232 16 16 chr10 100675530 100675655 -44913633 + GA-rich Low_complexity Low_complexity 1 125 0 226 307 168 30 chr10 100676364 100676465 -44912823 + MER5B DNA MER1_type 64 178 0 2204 102 0 3 chr10 100676542 100676836 -44912452 - AluSx SINE Alu -19 293 1 770 191 0 0 chr10 100676934 100677060 -44912228 + FLAM_C SINE Alu 1 126 -7 26 0 0 0 chr10 100677060 100677086 -44912202 + AT_rich Low_complexity Low_complexity 1 26 0 321 247 0 27 chr10 100677091 100677164 -44912124 - MIR SINE MIR -157 105 35 404 113 0 28 chr10 100677554 100677625 -44911663 + L1PA16 LINE L1 6094 6162 -4 266 324 46 19 chr10 100677971 100678079 -44911209 - L2 LINE L2 -22 3291 3181 328 304 26 17 chr10 100678569 100678684 -44910604 + MIR3 SINE MIR 65 180 -28 231 276 26 43 chr10 100679878 100679994 -44909294 - MIR SINE MIR -58 204 91 1266 183 91 16 chr10 100680103 100680493 -44908795 - L1ME2 LINE L1 -198 5966 5528 1975 146 0 3 chr10 100680728 100681015 -44908273 + AluSx SINE Alu 1 286 -26 21 0 0 0 chr10 100681232 100681253 -44908035 + AT_rich Low_complexity Low_complexity 1 21 0 388 240 124 24 chr10 100681264 100681406 -44907882 - MIR SINE MIR -62 146 4 1111 134 115 14 chr10 100681770 100681979 -44907309 - MER30 DNA MER1_type 0 230 1 2272 108 0 0 chr10 100683082 100683378 -44905910 - AluSx SINE Alu -15 297 2 842 182 0 0 chr10 100683479 100683611 -44905677 + FLAM_C SINE Alu 1 132 -11 879 166 226 6 chr10 100685387 100685568 -44903720 - MER58A DNA MER1_type 0 224 4 903 197 56 0 chr10 100685578 100685756 -44903532 - MER5A DNA MER1_type 0 189 2 21 0 0 0 chr10 100685941 100685962 -44903326 + AT_rich Low_complexity Low_complexity 1 21 0 207 0 0 0 chr10 100686288 100686311 -44902977 + (A)n Simple_repeat Simple_repeat 1 23 0 710 198 84 20 chr10 100686561 100686763 -44902525 + MER58C DNA MER1_type 1 215 0 2389 96 0 0 chr10 100687464 100687765 -44901523 + AluSx SINE Alu 1 301 -11 190 316 70 0 chr10 100688964 100689021 -44900267 + L3b LINE CR1 1197 1257 -326 2117 103 0 7 chr10 100689243 100689546 -44899742 + AluSc SINE Alu 1 301 0 325 193 219 17 chr10 100689689 100689808 -44899480 - L1ME4a LINE L1 -4 6117 5975 289 295 11 32 chr10 100690879 100690974 -44898314 + MIR SINE MIR 47 139 -123 1639 151 0 60 chr10 100691016 100691314 -44897974 + AluJb SINE Alu 7 286 -26 2262 107 0 0 chr10 100691357 100691655 -44897633 - AluSx SINE Alu -14 298 1 1926 167 3 3 chr10 100692834 100693146 -44896142 + AluJb SINE Alu 1 312 0 288 0 0 0 chr10 100693241 100693273 -44896015 + (A)n Simple_repeat Simple_repeat 1 32 0 21 0 0 0 chr10 100693335 100693356 -44895932 + AT_rich Low_complexity Low_complexity 1 21 0 2288 100 3 3 chr10 100693360 100693669 -44895619 + AluSg SINE Alu 1 309 -1 21 0 0 0 chr10 100694076 100694097 -44895191 + AT_rich Low_complexity Low_complexity 1 21 0 392 262 121 27 chr10 100694360 100694509 -44894779 - MIR SINE MIR -71 191 29 829 70 9 17 chr10 100694619 100694734 -44894554 - AluSc SINE Alu -3 306 193 2189 110 3 0 chr10 100694917 100695216 -44894072 + AluSq SINE Alu 1 300 -13 2402 103 3 0 chr10 100695304 100695616 -44893672 + AluSp SINE Alu 1 313 0 311 260 162 19 chr10 100695733 100695887 -44893401 + L1ME LINE L1 5603 5778 -343 1743 129 118 0 chr10 100696050 100696330 -44892958 + AluSq SINE Alu 1 313 0 184 247 117 0 chr10 100696353 100696430 -44892858 + L2 LINE L2 1345 1430 -1884 220 309 41 32 chr10 100696827 100696950 -44892338 - L3b LINE CR1 -205 1378 1255 201 74 0 0 chr10 100697691 100697718 -44891570 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 869 114 0 0 chr10 100697718 100697832 -44891456 - FLAM_C SINE Alu -23 120 7 2155 118 0 0 chr10 100697866 100698145 -44891143 + AluSx SINE Alu 17 295 -17 1298 152 48 35 chr10 100698385 100698616 -44890672 - AluJo SINE Alu -19 293 60 2513 78 0 0 chr10 100698710 100699016 -44890272 - AluY SINE Alu -5 306 1 2086 122 3 10 chr10 100699080 100699376 -44889912 + AluSc SINE Alu 1 294 -15 2461 50 7 10 chr10 100699680 100699967 -44889321 + AluY SINE Alu 1 288 -23 327 49 0 0 chr10 100699967 100700008 -44889280 + (CA)n Simple_repeat Simple_repeat 2 42 0 227 291 63 0 chr10 100700660 100700739 -44888549 - MIR SINE MIR -71 191 108 259 247 26 39 chr10 100700968 100701045 -44888243 - MER5A DNA MER1_type -1 188 113 250 280 11 54 chr10 100700970 100701063 -44888225 + MER5A DNA MER1_type 18 106 -83 * 418 264 93 21 chr10 100701266 100701406 -44887882 + MIR SINE MIR 1 150 -112 2254 85 3 7 chr10 100701409 100701703 -44887585 + AluSc SINE Alu 3 295 -14 1190 123 0 0 chr10 100701703 100701865 -44887423 + AluSg/x SINE Alu 134 295 -17 691 260 121 22 chr10 100702625 100702748 -44886540 - MIR SINE MIR 0 262 153 2196 116 3 0 chr10 100702748 100703051 -44886237 + AluSg SINE Alu 2 305 -5 691 260 121 22 chr10 100703051 100703150 -44886138 - MIR SINE MIR -109 153 18 497 268 121 11 chr10 100703563 100703753 -44885535 - MIR SINE MIR -28 234 24 2479 73 3 0 chr10 100704030 100704331 -44884957 + AluSp SINE Alu 1 302 -11 2127 106 38 0 chr10 100704331 100704623 -44884665 + AluSg SINE Alu 1 303 -7 261 0 0 0 chr10 100704816 100704845 -44884443 + (GA)n Simple_repeat Simple_repeat 2 30 0 326 278 229 14 chr10 100704904 100705127 -44884161 - L3b LINE CR1 -81 1502 1232 2598 52 3 3 chr10 100705183 100705490 -44883798 + AluSp SINE Alu 1 307 -6 2098 113 0 0 chr10 100706166 100706477 -44882811 + AluSx SINE Alu 1 311 0 476 341 52 0 chr10 100706779 100706914 -44882374 + L2 LINE L2 3116 3257 -15 1775 174 14 74 chr10 100706965 100707397 -44881891 + L1ME1 LINE L1 5423 5828 -338 39 0 0 0 chr10 100707426 100707465 -44881823 + AT_rich Low_complexity Low_complexity 1 39 0 1601 198 30 28 chr10 100707465 100707829 -44881459 + L1MB7 LINE L1 5815 6179 -5 2278 97 0 13 chr10 100707852 100708161 -44881127 - AluY SINE Alu -6 305 1 1032 156 0 0 chr10 100708269 100708449 -44880839 + (TA)n Simple_repeat Simple_repeat 1 180 0 1267 104 0 23 chr10 100708465 100708638 -44880650 - AluSq SINE Alu -140 173 5 2062 124 0 0 chr10 100709757 100710039 -44879249 - AluSg1 SINE Alu -8 301 20 259 197 213 0 chr10 100710166 100710227 -44879061 + HAL1 LINE L1 2386 2459 -48 439 281 14 14 chr10 100710236 100710375 -44878913 - MIR SINE MIR -4 258 120 2399 102 3 0 chr10 100710391 100710696 -44878592 - AluSx SINE Alu -6 306 1 2265 88 17 3 chr10 100710997 100711293 -44877995 - AluSp SINE Alu -13 300 1 745 203 139 0 chr10 100711355 100711513 -44877775 - AluJo SINE Alu -13 299 120 1967 158 10 0 chr10 100711899 100712203 -44877085 - AluJb SINE Alu -5 307 1 440 197 53 30 chr10 100712395 100712510 -44876778 + MIR SINE MIR 110 230 -32 2165 116 0 3 chr10 100712510 100712812 -44876476 + AluSc SINE Alu 1 301 -8 440 197 53 30 chr10 100712812 100712828 -44876460 + MIR SINE MIR 230 244 -18 2049 141 0 7 chr10 100713504 100713808 -44875480 - AluSx SINE Alu -2 310 9 2235 116 0 7 chr10 100714163 100714473 -44874815 + AluSq SINE Alu 1 308 -5 2094 100 7 17 chr10 100714593 100714884 -44874404 + AluSg SINE Alu 15 302 -8 463 245 0 10 chr10 100715118 100715220 -44874068 + MIR SINE MIR 91 191 -71 2138 89 7 46 chr10 100715676 100715980 -44873308 + AluSx SINE Alu 1 292 -20 2318 95 0 20 chr10 100716457 100716763 -44872525 - AluSx SINE Alu -12 300 1 2122 104 3 45 chr10 100716792 100717101 -44872187 - AluSq SINE Alu -17 296 1 424 174 0 0 chr10 100717128 100717197 -44872091 - AluSq SINE Alu -9 304 236 1851 122 8 0 chr10 100717222 100717469 -44871819 - AluSq SINE Alu -64 249 1 1356 129 25 0 chr10 100717477 100717708 -44871580 + MER33 DNA MER1_type 1 234 -90 904 140 0 7 chr10 100717708 100717844 -44871444 + AluJo SINE Alu 1 135 -177 497 133 51 0 chr10 100717844 100717942 -44871346 + MER33 DNA MER1_type 261 363 0 491 187 70 117 chr10 100718077 100718248 -44871040 + MER110 LTR ERV1 322 484 -7 1562 146 38 118 chr10 100719004 100719401 -44869887 + MLT1A1 LTR MaLR 1 365 0 2181 118 0 10 chr10 100719409 100719706 -44869582 - AluSx SINE Alu -18 294 1 2090 145 3 0 chr10 100719765 100720068 -44869220 - AluSx SINE Alu -8 304 1 2236 113 0 3 chr10 100720072 100720372 -44868916 - AluSg SINE Alu -11 299 1 2158 107 3 3 chr10 100720372 100720661 -44868627 - AluSg SINE Alu -20 290 1 * 2410 91 0 3 chr10 100720660 100720968 -44868320 - AluSc SINE Alu -2 307 1 24 32 0 0 chr10 100721042 100721073 -44868215 + AT_rich Low_complexity Low_complexity 1 31 0 1061 113 0 0 chr10 100721076 100721217 -44868071 + AluSc SINE Alu 1 141 -168 1339 122 0 0 chr10 100721966 100722155 -44867133 + AluSc SINE Alu 119 307 -2 225 0 0 0 chr10 100722169 100722194 -44867094 + (CA)n Simple_repeat Simple_repeat 2 26 0 2433 91 0 0 chr10 100722400 100722708 -44866580 + AluSp SINE Alu 1 308 -5 1370 207 30 8 chr10 100722772 100723038 -44866250 + AluJb SINE Alu 17 288 -24 2233 108 0 10 chr10 100723047 100723376 -44865912 + AluSg SINE Alu 1 310 0 665 170 0 18 chr10 100723729 100723841 -44865447 - AluJb SINE Alu -7 305 196 1959 129 25 0 chr10 100724796 100725082 -44864206 + AluSx SINE Alu 1 293 -19 2063 139 0 0 chr10 100726131 100726426 -44862862 + AluSx SINE Alu 1 295 -17 827 185 7 7 chr10 100726487 100726638 -44862650 + MLT1A1 LTR MaLR 1 151 -214 673 167 0 0 chr10 100726641 100726743 -44862545 + FLAM_A SINE Alu 20 121 -21 897 189 6 25 chr10 100726784 100726943 -44862345 + MLT1A1 LTR MaLR 167 322 -43 902 150 0 14 chr10 100727115 100727255 -44862033 - FLAM_C SINE Alu -3 140 3 225 313 0 0 chr10 100727572 100727636 -44861652 - Charlie4 DNA MER1_type -6 1955 1892 340 282 0 0 chr10 100728379 100728464 -44860824 + L2 LINE L2 2430 2514 -800 2206 104 6 38 chr10 100728484 100728670 -44860618 - AluSx SINE Alu 0 312 139 2209 95 0 57 chr10 100728670 100728985 -44860303 - AluSg SINE Alu -13 297 1 2206 104 6 38 chr10 100728985 100729116 -44860172 - AluSx SINE Alu -173 139 5 226 275 127 112 chr10 100729209 100729485 -44859803 + L2 LINE L2 2686 2965 -349 1651 151 85 18 chr10 100729507 100729779 -44859509 + AluJo SINE Alu 1 290 -22 209 138 50 0 chr10 100729780 100729860 -44859428 + (TA)n Simple_repeat Simple_repeat 1 84 0 2387 104 0 0 chr10 100729886 100730193 -44859095 - AluSc SINE Alu -2 307 1 705 223 23 0 chr10 100730311 100730441 -44858847 + FLAM_A SINE Alu 1 133 0 417 254 146 57 chr10 100730518 100730737 -44858551 + L1ME4a LINE L1 5776 6033 -88 2280 90 0 0 chr10 100730737 100731027 -44858261 + AluSg SINE Alu 1 290 -20 417 254 146 57 chr10 100731027 100731122 -44858166 + L1ME4a LINE L1 6033 6118 -3 298 253 102 110 chr10 100731446 100731810 -44857478 - L2 LINE L2 -7 3306 2946 2588 36 7 3 chr10 100732505 100732811 -44856477 - AluY SINE Alu -4 307 1 2095 122 7 3 chr10 100732813 100733108 -44856180 - AluSx SINE Alu -16 296 1 25 23 0 23 chr10 100733619 100733639 -44855649 + AT_rich Low_complexity Low_complexity 1 20 -22 2417 82 0 0 chr10 100733639 100733932 -44855356 - AluSg SINE Alu -17 293 1 25 23 0 23 chr10 100733932 100733954 -44855334 + AT_rich Low_complexity Low_complexity 20 42 0 1750 167 0 33 chr10 100733954 100734254 -44855034 - AluJo SINE Alu -22 290 1 2297 93 0 3 chr10 100734683 100734983 -44854305 + AluSp SINE Alu 1 299 -14 257 167 167 0 chr10 100735066 100735120 -44854168 - L2 LINE L2 -1 3312 3250 25 0 0 0 chr10 100735382 100735407 -44853881 + AT_rich Low_complexity Low_complexity 1 25 0 227 209 154 36 chr10 100736445 100736555 -44852733 - MIR3 SINE MIR -54 154 32 2260 92 0 0 chr10 100736632 100736940 -44852348 - AluSx SINE Alu 0 308 1 2303 101 0 7 chr10 100736974 100737272 -44852016 - AluSq SINE Alu -14 299 4 2287 98 0 3 chr10 100737397 100737694 -44851594 + AluSg SINE Alu 1 296 -14 1871 147 19 26 chr10 100738167 100738474 -44850814 + AluSx SINE Alu 1 305 -7 2183 115 7 0 chr10 100738749 100739045 -44850243 + AluSg SINE Alu 2 299 -11 389 258 98 111 chr10 100739439 100739567 -44849721 + MIR SINE MIR 1 126 -136 2168 108 7 10 chr10 100739567 100739873 -44849415 + AluSg SINE Alu 1 305 -5 389 258 98 111 chr10 100739873 100739988 -44849300 + MIR SINE MIR 126 241 -21 1840 135 4 0 chr10 100740118 100740378 -44848910 + AluSx SINE Alu 35 295 -17 699 295 55 17 chr10 100740438 100740675 -44848613 - MIR SINE MIR 0 262 17 324 273 0 50 chr10 100740689 100740788 -44848500 + MIR3 SINE MIR 87 180 -28 430 125 0 91 chr10 100740858 100740946 -44848342 + MADE1 DNA Mariner 1 80 0 321 276 0 67 chr10 100741186 100741291 -44847997 + MIR3 SINE MIR 73 170 -38 2250 80 0 4 chr10 100741386 100741662 -44847626 + AluSq SINE Alu 1 275 -38 180 0 0 0 chr10 100741667 100741687 -44847601 + (CA)n Simple_repeat Simple_repeat 1 20 0 385 311 146 52 chr10 100744509 100745008 -44844280 - L1M2 LINE L1 -5518 1331 786 231 36 0 0 chr10 100745195 100745223 -44844065 + (CTG)n Simple_repeat Simple_repeat 1 28 0 222 37 0 0 chr10 100747948 100747975 -44841313 + (TTTTTG)n Simple_repeat Simple_repeat 4 30 0 22 0 0 0 chr10 100748630 100748652 -44840636 + AT_rich Low_complexity Low_complexity 1 22 0 2326 89 0 0 chr10 100748986 100749278 -44840010 + AluSx SINE Alu 2 293 -19 2286 95 0 0 chr10 100749362 100749657 -44839631 - AluY SINE Alu -16 295 1 2410 99 0 0 chr10 100750054 100750356 -44838932 - AluSg SINE Alu -8 302 1 2168 114 0 3 chr10 100750675 100750972 -44838316 + AluSx SINE Alu 1 296 -16 2555 51 3 6 chr10 100750974 100751286 -44838002 + AluY SINE Alu 1 311 0 2256 95 0 3 chr10 100751432 100751728 -44837560 - AluY SINE Alu -16 295 1 2003 149 3 7 chr10 100752130 100752301 -44836987 - AluSx SINE Alu -4 308 138 225 0 0 0 chr10 100752301 100752326 -44836962 + (TTTTA)n Simple_repeat Simple_repeat 4 28 0 2077 96 4 0 chr10 100752327 100752597 -44836691 - AluSp SINE Alu -22 291 21 2003 149 3 7 chr10 100752597 100752732 -44836556 - AluSx SINE Alu -173 139 1 686 149 0 0 chr10 100752803 100752910 -44836378 - AluSg/x SINE Alu 0 309 203 2151 126 17 56 chr10 100752980 100753337 -44835951 + MER2 DNA MER2_type 2 344 0 399 281 54 38 chr10 100753676 100753810 -44835478 + L2 LINE L2 1860 1990 -1324 4602 146 114 81 chr10 100753810 100754017 -44835271 + Tigger3b DNA MER2_type 1 200 -2828 2363 87 0 7 chr10 100754017 100754315 -44834973 + AluSc SINE Alu 1 296 -13 4602 146 114 81 chr10 100754315 100754658 -44834630 + Tigger3b DNA MER2_type 200 530 -2498 2035 119 0 7 chr10 100754658 100754943 -44834345 + AluSx SINE Alu 1 283 -29 4602 146 114 81 chr10 100754943 100755013 -44834275 + Tigger3b DNA MER2_type 530 596 -2432 2297 68 3 7 chr10 100755013 100755308 -44833980 - AluY SINE Alu -17 294 1 4602 146 114 81 chr10 100755308 100755609 -44833679 + Tigger3b DNA MER2_type 596 886 -2142 1766 123 0 120 chr10 100755609 100755951 -44833337 - AluSx SINE Alu -11 301 1 4602 146 114 81 chr10 100755951 100756218 -44833070 + Tigger3b DNA MER2_type 886 1231 0 399 281 54 38 chr10 100756218 100756268 -44833020 + L2 LINE L2 1990 2047 -1267 245 0 89 0 chr10 100756286 100756331 -44832957 + CT-rich Low_complexity Low_complexity 2 50 0 609 274 31 42 chr10 100756368 100756656 -44832632 + L1ME3A LINE L1 4774 5058 -1088 1191 130 0 0 chr10 100756715 100756884 -44832404 + AluSg/x SINE Alu 137 305 -7 1665 198 109 57 chr10 100756931 100757529 -44831759 + L1ME3A LINE L1 5208 5822 -348 25 0 0 0 chr10 100757540 100757565 -44831723 + AT_rich Low_complexity Low_complexity 1 25 0 1213 126 0 11 chr10 100757565 100757740 -44831548 - AluJb SINE Alu -139 173 1 285 266 55 64 chr10 100757742 100757851 -44831437 + L1ME3A LINE L1 5826 5933 -237 628 110 0 0 chr10 100757852 100757934 -44831354 - FRAM SINE Alu -20 156 75 453 213 55 132 chr10 100757946 100758100 -44831188 + L1ME3A LINE L1 5944 6075 -95 2477 87 0 0 chr10 100758100 100758409 -44830879 + AluSc SINE Alu 1 309 0 453 213 55 132 chr10 100758409 100758489 -44830799 + L1ME3A LINE L1 6075 6160 -10 1025 163 12 6 chr10 100758503 100758669 -44830619 + AluJo SINE Alu 123 289 -23 1863 189 0 0 chr10 100758867 100759163 -44830125 + AluJb SINE Alu 1 296 -16 687 199 66 42 chr10 100759577 100759743 -44829545 - FAM SINE Alu -5 170 1 220 234 0 0 chr10 100759746 100759793 -44829495 + T-rich Low_complexity Low_complexity 1 47 0 639 259 0 0 chr10 100759795 100759926 -44829362 - FLAM_C SINE Alu 0 133 3 287 245 0 113 chr10 100760230 100760336 -44828952 + L2 LINE L2 1812 1905 -1409 1035 197 93 58 chr10 100760425 100760684 -44828604 + MLT1E2 LTR MaLR 387 626 0 348 358 110 24 chr10 100760922 100761305 -44827983 + L2 LINE L2 2365 2780 -534 2385 84 10 0 chr10 100761307 100761605 -44827683 - AluSc SINE Alu -8 301 1 237 314 220 0 chr10 100761773 100761891 -44827397 + L2 LINE L2 3117 3260 -12 332 248 68 75 chr10 100762131 100762218 -44827070 - L1ME LINE L1 -455 5666 5579 1835 151 17 3 chr10 100762218 100762510 -44826778 - AluJb SINE Alu -11 301 6 332 248 68 75 chr10 100762510 100762555 -44826733 - L1ME LINE L1 -542 5579 5535 2314 113 0 0 chr10 100762649 100762950 -44826338 - AluSq SINE Alu -12 301 1 2278 110 0 7 chr10 100763010 100763320 -44825968 - AluSx SINE Alu -4 308 1 486 0 0 0 chr10 100763546 100763600 -44825688 + (TA)n Simple_repeat Simple_repeat 2 55 0 24 32 0 0 chr10 100763648 100763679 -44825609 + AT_rich Low_complexity Low_complexity 1 31 0 1367 134 0 5 chr10 100763684 100763878 -44825410 - AluY SINE Alu -118 193 1 2302 115 7 0 chr10 100763879 100764183 -44825105 - AluSx SINE Alu -6 306 1 2409 81 3 0 chr10 100764240 100764537 -44824751 + AluSp SINE Alu 1 298 -15 537 328 73 22 chr10 100764719 100764951 -44824337 - MIR SINE MIR -6 256 13 2390 93 0 0 chr10 100765189 100765490 -44823798 + AluSq SINE Alu 1 301 -12 2183 117 0 13 chr10 100765520 100765829 -44823459 - AluSx SINE Alu -7 305 1 600 323 5 53 chr10 100766218 100766355 -44822933 + MER91A DNA MER1_type 16 144 -52 2088 119 3 3 chr10 100766355 100766669 -44822619 - AluSx SINE Alu 0 314 1 600 323 5 53 chr10 100766669 100766719 -44822569 + MER91A DNA MER1_type 144 195 -1 277 255 156 10 chr10 100766726 100766833 -44822455 - MIR SINE MIR -62 146 37 236 395 0 0 chr10 100767183 100767259 -44822029 + MIR SINE MIR 20 95 -167 721 253 109 9 chr10 100767263 100767484 -44821804 - MIR SINE MIR 0 262 20 839 128 0 0 chr10 100767485 100767602 -44821686 + FLAM_C SINE Alu 1 117 -26 35 0 0 0 chr10 100767602 100767637 -44821651 + AT_rich Low_complexity Low_complexity 1 35 0 185 197 91 45 chr10 100767643 100767709 -44821579 + MIR SINE MIR 96 164 -98 466 191 9 78 chr10 100767746 100767861 -44821427 - AluJ SINE Alu -22 290 184 895 139 0 0 chr10 100767861 100767990 -44821298 - AluJ SINE Alu -183 129 1 1946 146 0 10 chr10 100767997 100768299 -44820989 - AluSx SINE Alu -13 299 1 787 182 8 0 chr10 100768623 100768744 -44820544 - FLAM_C SINE Alu -20 123 2 568 261 29 48 chr10 100768813 100768967 -44820321 - MIR SINE MIR -1 261 112 2278 118 3 0 chr10 100768967 100769271 -44820017 + AluSx SINE Alu 1 305 -7 568 261 29 48 chr10 100769271 100769326 -44819962 - MIR SINE MIR -150 112 57 1367 78 0 0 chr10 100769487 100769654 -44819634 + AluSg/x SINE Alu 132 298 -12 448 173 173 36 chr10 100769690 100769800 -44819488 + FLAM_C SINE Alu 1 125 -8 2106 103 24 0 chr10 100769805 100770095 -44819193 + AluSx SINE Alu 1 297 -15 2163 100 30 0 chr10 100770395 100770695 -44818593 + AluSq SINE Alu 1 309 -4 2794 137 28 21 chr10 100770739 100771164 -44818124 + MSTC LTR MaLR 1 428 0 280 268 116 121 chr10 100771396 100771672 -44817616 - L2 LINE L2 0 3313 3038 2396 85 0 0 chr10 100771672 100771967 -44817321 + AluSq SINE Alu 1 295 -18 280 268 116 121 chr10 100771967 100772086 -44817202 - L2 LINE L2 -275 3038 2920 735 210 74 11 chr10 100772101 100772277 -44817011 - MER58C DNA MER1_type -2 213 27 727 282 117 30 chr10 100772295 100772628 -44816660 - L2 LINE L2 -407 2907 2546 2085 97 10 0 chr10 100772746 100773034 -44816254 - AluSc SINE Alu -18 291 1 866 177 0 0 chr10 100773268 100773398 -44815890 + FLAM_C SINE Alu 3 132 -1 758 319 74 32 chr10 100773769 100774173 -44815115 - LTR16A LTR ERVL -6 444 24 2191 119 0 0 chr10 100774485 100774778 -44814510 - AluSx SINE Alu -19 293 1 225 317 117 95 chr10 100774996 100775416 -44813872 - L2 LINE L2 -3 3269 2841 2030 139 0 23 chr10 100775480 100775790 -44813498 - AluJb SINE Alu -9 303 1 2172 111 0 20 chr10 100775815 100776121 -44813167 + AluSx SINE Alu 1 300 -12 3629 164 76 146 chr10 100776125 100777069 -44812219 - L1MC4a LINE L1 0 7808 6885 547 143 82 0 chr10 100777069 100777167 -44812121 - HY1 scRNA scRNA -1 111 6 3629 164 76 146 chr10 100777167 100777500 -44811788 - L1MC4a LINE L1 -923 6885 6530 645 196 0 45 chr10 100777510 100777643 -44811645 - L2 LINE L2 -1 3312 3186 317 284 9 115 chr10 100777719 100778067 -44811221 - L2 LINE L2 -561 2753 2443 22 35 0 0 chr10 100778097 100778126 -44811162 + AT_rich Low_complexity Low_complexity 1 29 0 329 302 7 50 chr10 100778182 100778321 -44810967 + L2 LINE L2 3179 3311 -2 359 308 184 5 chr10 100778982 100779167 -44810121 + MIR SINE MIR 32 249 -13 298 284 83 9 chr10 100779361 100779470 -44809818 + L2 LINE L2 3194 3310 -3 1935 137 55 0 chr10 100779479 100779771 -44809517 + AluSx SINE Alu 1 308 -4 252 250 42 21 chr10 100779980 100780068 -44809220 + LTR67 LTR ERVL 428 517 -40 994 178 46 0 chr10 100780068 100780242 -44809046 - MER20 DNA MER1_type -2 217 36 5643 171 68 52 chr10 100780448 100780758 -44808530 - L1MB8 LINE L1 -5 6173 5869 2551 71 0 0 chr10 100780758 100781067 -44808221 - AluY SINE Alu -1 310 2 5643 171 68 52 chr10 100781067 100781186 -44808102 - L1MB8 LINE L1 -309 5869 5753 2487 96 0 0 chr10 100781186 100781499 -44807789 - AluSq SINE Alu 0 313 1 5643 171 68 52 chr10 100781499 100782529 -44806759 - L1MB8 LINE L1 -425 5753 4741 2166 116 0 0 chr10 100782529 100782823 -44806465 + AluSx SINE Alu 1 294 -18 2352 84 0 10 chr10 100782823 100783121 -44806167 + AluSg1 SINE Alu 1 295 -14 5643 171 68 52 chr10 100783121 100783519 -44805769 - L1MB8 LINE L1 -1437 4741 4286 2403 93 0 0 chr10 100783519 100783819 -44805469 - AluSc SINE Alu -9 300 1 5643 171 68 52 chr10 100783819 100784143 -44805145 - L1MB8 LINE L1 -1892 4286 3969 1623 158 0 33 chr10 100784680 100784953 -44804335 + AluSx SINE Alu 41 304 -8 299 64 0 21 chr10 100784953 100784981 -44804307 + (GA)n Simple_repeat Simple_repeat 1 29 -17 2190 110 10 10 chr10 100784981 100785289 -44803999 + AluSq SINE Alu 1 308 -5 299 64 0 21 chr10 100785289 100785307 -44803981 + (GA)n Simple_repeat Simple_repeat 29 46 0 1109 188 0 5 chr10 100785361 100785547 -44803741 + AluJb SINE Alu 3 187 -125 218 192 0 0 chr10 100785575 100785627 -44803661 + A-rich Low_complexity Low_complexity 1 52 0 2441 91 0 3 chr10 100785671 100785979 -44803309 - AluSx SINE Alu -4 308 2 352 113 88 38 chr10 100785979 100786059 -44803229 - L1M LINE L1 -782 5402 5319 288 143 0 0 chr10 100786051 100786100 -44803188 + L1M LINE L1 5310 5358 -976 * 239 138 0 52 chr10 100786100 100786158 -44803130 - L1M LINE L1 -976 5358 5304 721 164 17 0 chr10 100786197 100786313 -44802975 - FLAM_C SINE Alu -15 118 1 488 247 20 20 chr10 100786313 100786459 -44802829 - L1M4 LINE L1 -846 5300 5155 1735 235 97 19 chr10 100786459 100786935 -44802353 - Charlie1a DNA MER1_type -942 513 1 2199 117 10 0 chr10 100787328 100787627 -44801661 + AluSg SINE Alu 1 302 -8 1896 149 17 3 chr10 100787889 100788190 -44801098 + AluJb SINE Alu 1 305 -7 489 301 18 48 chr10 100788230 100788454 -44800834 - MIR SINE MIR -10 252 36 186 273 136 15 chr10 100788454 100788520 -44800768 - MER5A DNA MER1_type 0 189 116 * 195 309 12 36 chr10 100788466 100788550 -44800738 + MER5A DNA MER1_type 34 115 -74 2357 90 3 3 chr10 100788635 100788947 -44800341 - AluSx SINE Alu 0 312 1 2371 88 0 0 chr10 100788961 100789257 -44800031 - AluSc SINE Alu -13 296 1 694 344 94 33 chr10 100789282 100789789 -44799499 + L2 LINE L2 2737 3272 0 2212 175 20 32 chr10 100789829 100790174 -44799114 - MSTD LTR MaLR 0 396 53 2280 109 0 0 chr10 100790174 100790491 -44798797 - AluSx SINE Alu 0 317 1 2212 175 20 32 chr10 100790491 100790544 -44798744 - MSTD LTR MaLR -343 53 1 2364 82 23 0 chr10 100790851 100791155 -44798133 - AluY SINE Alu 0 311 1 2152 130 0 0 chr10 100791223 100791522 -44797766 + AluSx SINE Alu 1 299 -13 1253 86 0 0 chr10 100792054 100792205 -44797083 - AluSc SINE Alu -16 293 143 522 128 94 17 chr10 100792572 100792689 -44796599 - L1MB7 LINE L1 -1 6183 6058 2588 163 18 43 chr10 100792694 100793098 -44796190 - L1MB7 LINE L1 -77 6107 5717 1915 125 37 20 chr10 100793098 100793393 -44795895 + AluJb SINE Alu 1 300 -12 2588 163 18 43 chr10 100793393 100793498 -44795790 - L1MB7 LINE L1 -467 5717 5611 1883 141 14 0 chr10 100793884 100794174 -44795114 + AluSx SINE Alu 1 294 -18 1953 126 0 14 chr10 100794176 100794462 -44794826 + AluSx SINE Alu 1 282 -30 31 26 0 0 chr10 100794474 100794512 -44794776 + AT_rich Low_complexity Low_complexity 1 38 0 886 109 0 8 chr10 100794526 100794654 -44794634 + FLAM_C SINE Alu 9 135 -8 504 74 74 0 chr10 100794654 100794775 -44794513 + (TA)n Simple_repeat Simple_repeat 1 130 0 284 252 136 0 chr10 100797684 100797787 -44791501 + L2 LINE L2 3197 3313 0 1655 131 26 64 chr10 100798012 100798324 -44790964 - AluJb SINE Alu -12 300 1 2003 123 3 40 chr10 100798411 100798712 -44790576 + AluSx SINE Alu 3 292 -20 376 288 46 33 chr10 100798893 100799046 -44790242 + MER5B DNA MER1_type 2 156 -22 295 262 195 34 chr10 100799099 100799248 -44790040 + MIR SINE MIR 1 173 -89 1554 192 24 11 chr10 100799676 100799963 -44789325 + AluJo SINE Alu 1 291 -21 389 252 70 9 chr10 100800008 100800123 -44789165 - L2 LINE L2 -4 3309 3188 312 146 18 0 chr10 100800237 100800292 -44788996 - Alu SINE Alu 0 308 253 2185 95 0 3 chr10 100800304 100800624 -44788664 - AluY SINE Alu 0 319 1 249 159 0 0 chr10 100800747 100800791 -44788497 + (TA)n Simple_repeat Simple_repeat 2 45 0 2069 112 14 10 chr10 100800795 100801091 -44788197 - AluSp SINE Alu -16 297 1 1845 151 0 35 chr10 100802083 100802394 -44786894 - AluJb SINE Alu -12 300 1 2133 128 3 13 chr10 100802400 100802706 -44786582 - AluSg SINE Alu -7 303 1 1823 133 0 0 chr10 100802832 100803081 -44786207 + AluSx SINE Alu 1 249 -63 208 295 58 45 chr10 100803277 100803433 -44785855 + L2 LINE L2 2220 2377 -937 1641 133 54 21 chr10 100803486 100803765 -44785523 - AluJb SINE Alu -8 304 17 792 141 30 116 chr10 100803840 100804039 -44785249 - AluJo SINE Alu -129 183 2 1626 168 7 11 chr10 100804832 100805112 -44784176 + AluJo SINE Alu 34 312 0 1689 144 0 58 chr10 100805117 100805429 -44783859 + AluJo SINE Alu 1 294 -18 1933 151 24 7 chr10 100805808 100806106 -44783182 - AluSx SINE Alu -9 303 1 273 263 80 36 chr10 100806326 100806463 -44782825 + MIR SINE MIR 8 150 -112 1110 149 0 0 chr10 100806535 100806696 -44782592 + MER2 DNA MER2_type 10 170 -175 2356 102 7 0 chr10 100806696 100807000 -44782288 + AluSx SINE Alu 1 306 -6 1377 134 0 5 chr10 100807001 100807195 -44782093 + AluY SINE Alu 1 193 -118 24 32 0 0 chr10 100807200 100807231 -44782057 + AT_rich Low_complexity Low_complexity 1 31 0 486 0 0 0 chr10 100807279 100807333 -44781955 + (TA)n Simple_repeat Simple_repeat 2 55 0 2266 107 3 0 chr10 100807559 100807857 -44781431 + AluSp SINE Alu 1 299 -14 2718 196 84 56 chr10 100807858 100808064 -44781224 + ERVL LTR ERVL 342 541 -5223 2231 125 3 0 chr10 100808064 100808375 -44780913 - AluSx SINE Alu 0 312 1 2718 196 84 56 chr10 100808375 100808826 -44780462 + ERVL LTR ERVL 541 1017 -4747 566 188 16 36 chr10 100808828 100809006 -44780282 + MLT1-int LTR MaLR 618 880 -491 282 215 0 15 chr10 100809073 100809138 -44780150 + MLT-int LTR MaLR 680 743 -992 1594 215 21 117 chr10 100809218 100809340 -44779948 + MLT1B-int LTR MaLR 1267 1399 -336 2251 101 3 10 chr10 100809340 100809637 -44779651 + AluSx SINE Alu 1 295 -17 1594 215 21 117 chr10 100809637 100809877 -44779411 + MLT1B-int LTR MaLR 1399 1660 -75 2130 92 41 3 chr10 100809877 100810170 -44779118 - AluY SINE Alu -7 304 1 1594 215 21 117 chr10 100810170 100810182 -44779106 + MLT1B-int LTR MaLR 1660 1672 -63 942 128 0 0 chr10 100810182 100810315 -44778973 - FLAM_C SINE Alu 0 133 1 1594 215 21 117 chr10 100810315 100810449 -44778839 + MLT1B-int LTR MaLR 1672 1728 -7 1607 198 81 3 chr10 100810457 100810816 -44778472 + MLT1B LTR MaLR 4 390 0 614 198 12 80 chr10 100810816 100810970 -44778318 + LTR8-int LTR ERV1 3842 4005 -186 4055 116 13 96 chr10 100810970 100811128 -44778160 + LTR8 LTR ERV1 1 170 -521 1945 135 51 0 chr10 100811128 100811424 -44777864 + AluSx SINE Alu 1 311 -1 4055 116 13 96 chr10 100811424 100811854 -44777434 + LTR8 LTR ERV1 170 516 -175 1803 132 68 27 chr10 100811854 100812149 -44777139 + AluSx SINE Alu 3 309 -3 4055 116 13 96 chr10 100812149 100812312 -44776976 + LTR8 LTR ERV1 516 691 0 2360 94 3 0 chr10 100812713 100813011 -44776277 + AluSg SINE Alu 1 299 -11 288 232 147 0 chr10 100813030 100813125 -44776163 + MIR SINE MIR 41 149 -59 899 137 8 0 chr10 100813126 100813257 -44776031 - AluJb SINE Alu -180 132 1 298 208 0 0 chr10 100813257 100813310 -44775978 + MLT1H LTR MaLR 497 549 0 2356 93 0 7 chr10 100813384 100813684 -44775604 + AluSg SINE Alu 1 298 -12 584 264 120 41 chr10 100814298 100814666 -44774622 - L2 LINE L2 -565 2749 2353 499 232 134 16 chr10 100814721 100814915 -44774373 - MIR SINE MIR -2 260 44 239 188 78 0 chr10 100814942 100815006 -44774282 + MIR3 SINE MIR 102 170 -38 372 94 16 31 chr10 100815526 100815590 -44773698 - MLT1A2 LTR MaLR -8 366 304 229 180 80 0 chr10 100815583 100815633 -44773655 - AluY SINE Alu -4 298 245 * 2102 88 0 4 chr10 100815734 100815997 -44773291 - AluY SINE Alu -49 262 1 2462 73 15 12 chr10 100815998 100816326 -44772962 - MER41A LTR ERV1 -225 329 1 2529 72 0 3 chr10 100816453 100816760 -44772528 - AluY SINE Alu -5 306 1 303 253 89 21 chr10 100816803 100816993 -44772295 + L1MC4 LINE L1 7839 8041 -1 629 151 0 56 chr10 100817472 100817598 -44771690 + L1MB3 LINE L1 6064 6182 -1 22 0 0 0 chr10 100818214 100818236 -44771052 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr10 100819927 100819958 -44769330 + AT_rich Low_complexity Low_complexity 1 31 0 2235 115 0 3 chr10 100820707 100821011 -44768277 + AluSg SINE Alu 1 303 -7 2293 82 0 3 chr10 100821076 100821369 -44767919 + AluY SINE Alu 1 292 -19 1703 153 49 17 chr10 100821373 100821661 -44767627 + AluJb SINE Alu 1 297 -15 1450 188 6 60 chr10 100821665 100821979 -44767309 + AluJo SINE Alu 1 297 -15 2268 104 7 0 chr10 100822116 100822413 -44766875 + AluSx SINE Alu 2 300 -12 757 151 0 17 chr10 100822516 100822635 -44766653 - FLAM_C SINE Alu -25 118 2 400 291 87 35 chr10 100824204 100824312 -44764976 + MER5A DNA MER1_type 9 131 -58 1535 182 19 36 chr10 100824312 100824619 -44764669 - AluJo SINE Alu -10 302 1 400 291 87 35 chr10 100824619 100824682 -44764606 + MER5A DNA MER1_type 131 189 0 1971 133 26 3 chr10 100824848 100825150 -44764138 - AluSx SINE Alu -1 311 3 1260 186 40 108 chr10 100825155 100825506 -44763782 - L1M4 LINE L1 -1646 4500 4184 2088 130 0 3 chr10 100825506 100825805 -44763483 - AluSx SINE Alu -14 298 1 1260 186 40 108 chr10 100825805 100825899 -44763389 - L1M4 LINE L1 -1962 4184 4085 1728 177 7 7 chr10 100825899 100826198 -44763090 + AluSx SINE Alu 1 299 -13 899 156 12 12 chr10 100826206 100826366 -44762922 + AluJo SINE Alu 14 173 -139 2262 85 16 10 chr10 100826602 100826908 -44762380 + AluSp SINE Alu 5 312 -1 293 300 71 0 chr10 100827135 100827283 -44762005 - L2 LINE L2 -6 3266 104 1986 152 0 0 chr10 100827623 100827913 -44761375 + AluSx SINE Alu 1 290 -22 712 100 0 0 chr10 100828179 100828279 -44761009 + HY3 scRNA scRNA 2 101 0 25 0 0 0 chr10 100828391 100828416 -44760872 + AT_rich Low_complexity Low_complexity 1 25 0 2420 93 0 3 chr10 100829741 100830052 -44759236 - AluSq SINE Alu -3 310 1 347 161 18 0 chr10 100830071 100830127 -44759161 - MER58A DNA MER1_type 0 224 168 436 226 0 0 chr10 100830129 100830213 -44759075 - MER58A DNA MER1_type -23 84 1 196 202 131 12 chr10 100830349 100830370 -44758918 - L2 LINE L2 -1202 2112 2095 651 189 24 24 chr10 100830370 100830497 -44758791 + FLAM_A SINE Alu 4 130 -3 196 202 131 12 chr10 100830497 100830559 -44758729 - L2 LINE L2 -1219 2095 2019 1896 171 3 0 chr10 100830561 100830859 -44758429 + AluJb SINE Alu 6 304 -8 856 210 160 42 chr10 100830864 100830949 -44758339 - L2 LINE L2 -1389 1925 1851 2228 97 7 13 chr10 100830949 100831257 -44758031 + AluSp SINE Alu 1 306 -7 856 210 160 42 chr10 100831257 100831599 -44757689 - L2 LINE L2 -1463 1851 1397 1816 147 3 52 chr10 100831607 100831914 -44757374 + AluJo SINE Alu 1 292 -20 1163 62 6 37 chr10 100832632 100832794 -44756494 + AluSp/q SINE Alu 155 311 -2 2116 136 0 0 chr10 100832803 100833098 -44756190 + AluSx SINE Alu 1 295 -17 2432 103 0 0 chr10 100833103 100833415 -44755873 + AluSx SINE Alu 1 312 0 832 233 0 0 chr10 100834141 100834287 -44755001 + FRAM SINE Alu 1 146 -30 477 242 180 28 chr10 100834643 100834854 -44754434 - L1MC4a LINE L1 -1865 5943 5701 2145 93 0 0 chr10 100834856 100835126 -44754162 + AluSx SINE Alu 21 290 -22 21 0 0 0 chr10 100835156 100835177 -44754111 + AT_rich Low_complexity Low_complexity 1 21 0 1454 186 28 63 chr10 100835496 100835814 -44753474 - AluJb SINE Alu -5 307 1 1809 138 11 11 chr10 100835885 100836153 -44753135 - AluJo SINE Alu -31 281 14 2335 99 3 0 chr10 100837279 100837583 -44751705 - AluSq SINE Alu -7 306 2 218 278 44 56 chr10 100838566 100838656 -44750632 - MIR SINE MIR -39 223 135 1703 119 71 19 chr10 100838944 100839212 -44750076 + AluSx SINE Alu 1 282 -30 2118 128 16 3 chr10 100839400 100839705 -44749583 - AluJb SINE Alu -3 309 1 2158 102 55 0 chr10 100840205 100840498 -44748790 - AluSq SINE Alu -4 309 1 700 198 0 0 chr10 100840778 100840894 -44748394 + FLAM_A SINE Alu 1 116 -17 1773 127 0 4 chr10 100840917 100841161 -44748127 + AluSx SINE Alu 1 243 -69 791 10 10 0 chr10 100841179 100841275 -44748013 + (TAGA)n Simple_repeat Simple_repeat 2 98 0 2459 76 0 7 chr10 100841616 100841917 -44747371 + AluSp SINE Alu 1 299 -14 2337 97 0 0 chr10 100841922 100842221 -44747067 + AluSx SINE Alu 1 299 -13 229 306 163 12 chr10 100843828 100843988 -44745300 + MIR SINE MIR 30 213 -49 2485 143 7 51 chr10 100844043 100844492 -44744796 - LTR3 LTR ERVK -3 429 1 21 0 0 0 chr10 100844732 100844753 -44744535 + AT_rich Low_complexity Low_complexity 1 21 0 378 42 0 0 chr10 100845617 100845665 -44743623 + (TG)n Simple_repeat Simple_repeat 2 49 0 475 270 0 16 chr10 100845805 100845931 -44743357 - L2 LINE L2 0 3272 3149 24 32 0 0 chr10 100846223 100846254 -44743034 + AT_rich Low_complexity Low_complexity 1 31 0 312 301 40 57 chr10 100847015 100847191 -44742097 + MIR SINE MIR 20 192 -70 470 204 104 8 chr10 100848138 100848295 -44740993 + MIR SINE MIR 15 187 -62 212 318 45 18 chr10 100848795 100848905 -44740383 + L2 LINE L2 3193 3305 -8 198 0 0 0 chr10 100849010 100849032 -44740256 + (T)n Simple_repeat Simple_repeat 1 22 0 1370 197 7 15 chr10 100849065 100849334 -44739954 + AluJb SINE Alu 21 287 -25 2251 117 3 0 chr10 100849337 100849646 -44739642 + AluSg SINE Alu 1 310 0 2707 162 34 8 chr10 100850452 100850959 -44738329 + L1MB7 LINE L1 5663 6182 -2 8967 175 23 54 chr10 100850959 100851989 -44737299 - L1MA3 LINE L1 0 7724 6663 2113 113 21 3 chr10 100851989 100852280 -44737008 - AluSx SINE Alu -11 301 6 8967 175 23 54 chr10 100852280 100852519 -44736769 - L1MA3 LINE L1 -1061 6663 6418 1948 172 0 6 chr10 100852519 100852833 -44736455 - AluSx SINE Alu 0 312 1 8967 175 23 54 chr10 100852833 100853437 -44735851 - L1MA3 LINE L1 -1306 6418 5797 1132 169 0 0 chr10 100853437 100853614 -44735674 - AluJb SINE Alu -2 310 134 8967 175 23 54 chr10 100853614 100853986 -44735302 - L1MA3 LINE L1 -1927 5797 5415 2259 100 10 3 chr10 100853986 100854297 -44734991 + AluSp SINE Alu 1 313 0 8967 175 23 54 chr10 100854297 100855336 -44733952 - L1MA3 LINE L1 -2309 5415 4345 216 0 0 0 chr10 100855336 100855360 -44733928 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1672 180 3 17 chr10 100855362 100855525 -44733763 - AluJb SINE Alu -25 287 128 2191 127 0 3 chr10 100855525 100855832 -44733456 - AluSx SINE Alu -6 306 1 1672 180 3 17 chr10 100855832 100855957 -44733331 - AluJb SINE Alu -184 128 3 2340 103 7 0 chr10 100855959 100856259 -44733029 - AluSg SINE Alu -8 302 1 8967 175 23 54 chr10 100856259 100856560 -44732728 - L1MA3 LINE L1 -3381 4343 4157 763 161 0 7 chr10 100856560 100856697 -44732591 + L1PA15 LINE L1 5199 5334 -812 1425 124 9 19 chr10 100856698 100856908 -44732380 + AluJb SINE Alu 91 298 -14 5021 128 36 17 chr10 100856908 100857268 -44732020 + L1PA15 LINE L1 5322 5674 -491 234 0 0 0 chr10 100857268 100857294 -44731994 + (CA)n Simple_repeat Simple_repeat 1 26 0 5021 128 36 17 chr10 100857294 100857740 -44731548 + L1PA15 LINE L1 5674 6143 -22 1828 165 7 13 chr10 100857741 100858044 -44731244 + AluSx SINE Alu 1 301 -11 903 244 31 4 chr10 100858048 100858273 -44731015 - L1MA3 LINE L1 -3404 4161 3931 2166 120 0 0 chr10 100858273 100858565 -44730723 - AluSg SINE Alu -16 294 3 256 111 0 0 chr10 100858593 100858638 -44730650 - AluSp/q SINE Alu -1 302 258 8734 118 44 22 chr10 100858638 100859128 -44730160 - L1MA3 LINE L1 -4556 3009 2531 2392 95 0 0 chr10 100859128 100859432 -44729856 + AluSq SINE Alu 1 304 -9 8734 118 44 22 chr10 100859432 100859481 -44729807 - L1MA3 LINE L1 -5034 2531 2485 2151 110 7 0 chr10 100859481 100859771 -44729517 - AluSq SINE Alu -17 296 5 8734 118 44 22 chr10 100859771 100860631 -44728657 - L1MA3 LINE L1 -5080 2485 1578 281 222 0 69 chr10 100860862 100860913 -44728375 - L1M4 LINE L1 -2047 4099 4053 2176 108 0 26 chr10 100860913 100861218 -44728070 - AluSq SINE Alu -15 298 2 281 222 0 69 chr10 100861218 100861238 -44728050 - L1M4 LINE L1 -2093 4053 4033 1319 181 57 28 chr10 100861259 100861510 -44727778 + Tigger3b DNA MER2_type 21 282 -2747 2617 27 3 3 chr10 100861510 100861806 -44727482 - AluY SINE Alu -15 296 1 1319 181 57 28 chr10 100861806 100861836 -44727452 + Tigger3b DNA MER2_type 282 310 -2719 2311 110 3 0 chr10 100861855 100862164 -44727124 - AluSg SINE Alu 0 310 1 636 105 0 0 chr10 100862179 100862265 -44727023 - AluSg/x SINE Alu -7 302 217 1616 186 3 14 chr10 100862284 100862569 -44726719 - AluJo SINE Alu -30 282 1 5102 105 96 23 chr10 100862569 100863447 -44725841 + Tigger3b DNA MER2_type 290 1231 0 2444 231 114 0 chr10 100863448 100864170 -44725118 - L1M4 LINE L1 -2115 4031 3228 2485 76 3 0 chr10 100864175 100864479 -44724809 + AluSp SINE Alu 1 305 -8 587 195 78 16 chr10 100864768 100864896 -44724392 - AluJo SINE Alu -174 138 3 346 234 0 43 chr10 100865020 100865114 -44724174 - L1MC4 LINE L1 -1339 6703 6614 272 217 0 24 chr10 100865117 100865200 -44724088 + (TA)n Simple_repeat Simple_repeat 2 82 0 21 36 0 0 chr10 100865378 100865406 -44723882 + AT_rich Low_complexity Low_complexity 1 28 0 287 245 144 14 chr10 100866124 100866263 -44723025 + MIR SINE MIR 80 236 -26 2235 101 11 0 chr10 100866852 100867138 -44722150 + AluSq SINE Alu 1 289 -24 901 238 49 16 chr10 100867625 100867869 -44721419 + L1MC5 LINE L1 5385 5636 -2172 310 193 0 110 chr10 100867892 100868001 -44721287 + L1MC5 LINE L1 7132 7228 -733 303 200 88 84 chr10 100868016 100868172 -44721116 + L1MC5 LINE L1 7235 7409 -633 189 0 0 0 chr10 100868172 100868193 -44721095 + (TA)n Simple_repeat Simple_repeat 2 22 0 303 200 88 84 chr10 100868193 100868260 -44721028 + L1MC5 LINE L1 7409 7474 -568 262 272 0 48 chr10 100868333 100868436 -44720852 + L1MEd LINE L1 1105 1202 -4917 353 141 16 0 chr10 100868649 100868713 -44720575 + L1MC3 LINE L1 7198 7262 -523 * 403 113 48 0 chr10 100868709 100868771 -44720517 + L1MC3 LINE L1 7484 7548 -237 1038 246 95 14 chr10 100868875 100869150 -44720138 - L1M4 LINE L1 -2641 3505 3181 2543 74 3 0 chr10 100869150 100869460 -44719828 + AluSp SINE Alu 1 311 -2 1038 246 95 14 chr10 100869460 100869615 -44719673 - L1M4 LINE L1 -2965 3181 3040 1614 177 0 31 chr10 100869615 100869903 -44719385 - AluJb SINE Alu 0 312 34 2480 72 0 0 chr10 100869920 100870213 -44719075 - AluSc SINE Alu -7 302 10 851 217 54 0 chr10 100870226 100870392 -44718896 - FAM SINE Alu 0 175 1 5469 131 88 50 chr10 100870412 100871518 -44717770 - L1MC1 LINE L1 0 6333 5185 1848 103 22 26 chr10 100871531 100871804 -44717484 - AluY SINE Alu 0 311 40 2213 206 71 53 chr10 100871804 100872245 -44717043 - L1M4 LINE L1 -3113 3033 2573 1672 173 0 41 chr10 100872245 100872540 -44716748 + AluJo SINE Alu 9 291 -21 2213 206 71 53 chr10 100872540 100872802 -44716486 - L1M4 LINE L1 -3573 2573 2317 2179 110 0 3 chr10 100872875 100873165 -44716123 - AluSx SINE Alu -23 289 1 21 82 0 0 chr10 100873353 100873402 -44715886 + AT_rich Low_complexity Low_complexity 1 49 0 232 323 101 25 chr10 100873461 100873619 -44715669 - MIR SINE MIR -36 226 57 212 260 20 0 chr10 100874185 100874235 -44715053 + CT-rich Low_complexity Low_complexity 2 52 0 270 310 110 0 chr10 100874327 100874427 -44714861 - LTR33 LTR ERVL -305 216 106 953 262 39 26 chr10 100874562 100874867 -44714421 - L1MC/D LINE L1 -2020 5788 5480 1813 176 6 0 chr10 100875049 100875361 -44713927 + L1MC3 LINE L1 7190 7503 -282 675 272 19 6 chr10 100875356 100875514 -44713774 + L1MC/D LINE L1 5477 5636 -2172 * 1088 208 28 35 chr10 100875637 100875719 -44713569 - L1MC4a LINE L1 -121 7687 7606 2304 120 0 0 chr10 100875719 100876028 -44713260 - AluSg SINE Alu -1 309 1 1088 208 28 35 chr10 100876028 100876234 -44713054 - L1MC4a LINE L1 -202 7606 7401 243 0 0 0 chr10 100876234 100876261 -44713027 + (TG)n Simple_repeat Simple_repeat 2 28 0 378 178 39 5 chr10 100876320 100876420 -44712868 - L1MC4a LINE L1 -611 7197 7122 1902 127 97 47 chr10 100876420 100876601 -44712687 - MLT1A1 LTR MaLR -4 361 190 2042 136 7 3 chr10 100876601 100876895 -44712393 - AluSq SINE Alu -18 295 1 1902 127 97 47 chr10 100876895 100877053 -44712235 - MLT1A1 LTR MaLR -174 191 5 2100 143 0 3 chr10 100877057 100877365 -44711923 - AluSx SINE Alu -4 308 2 2081 100 3 17 chr10 100878132 100878421 -44710867 + AluSp SINE Alu 17 301 -12 835 159 0 0 chr10 100878650 100878776 -44710512 + FRAM SINE Alu 21 146 -30 1649 191 3 35 chr10 100878875 100879058 -44710230 - AluJo SINE Alu -8 304 134 2348 99 3 0 chr10 100879058 100879360 -44709928 - AluSx SINE Alu -9 303 1 1649 191 3 35 chr10 100879360 100879490 -44709798 - AluJo SINE Alu -178 134 1 2381 88 10 0 chr10 100879527 100879835 -44709453 - AluSx SINE Alu 0 312 2 646 180 172 8 chr10 100879835 100879957 -44709331 - AluJo SINE Alu -167 145 4 258 304 10 20 chr10 100879988 100880090 -44709198 + MER5B DNA MER1_type 78 178 0 421 208 43 120 chr10 100880799 100880968 -44708320 + MER87 LTR ERV1 1 151 -390 2143 117 10 0 chr10 100880969 100881260 -44708028 + AluSx SINE Alu 3 296 -16 1200 129 6 0 chr10 100881260 100881431 -44707857 + AluSg/x SINE Alu 134 305 -7 1168 232 62 57 chr10 100881615 100882051 -44707237 + LTR8A LTR ERV1 290 727 0 414 214 138 21 chr10 100882153 100882212 -44707076 - MER5A DNA MER1_type 0 189 138 2004 123 26 7 chr10 100882212 100882514 -44706774 + AluSx SINE Alu 1 308 -4 414 214 138 21 chr10 100882514 100882599 -44706689 - MER5A DNA MER1_type -51 138 28 182 233 0 23 chr10 100882889 100882932 -44706356 + MIR SINE MIR 111 152 -56 2124 133 3 7 chr10 100882986 100883294 -44705994 + AluSx SINE Alu 1 307 -5 252 67 0 0 chr10 100883348 100883378 -44705910 - MER21B LTR ERV1 -324 539 510 890 241 20 16 chr10 100883769 100884022 -44705266 - MIR SINE MIR -2 260 7 863 138 0 8 chr10 100884064 100884194 -44705094 + FLAM_C SINE Alu 1 129 -4 2207 91 13 19 chr10 100884235 100884543 -44704745 + AluSx SINE Alu 1 306 -6 3925 176 112 15 chr10 100884630 100885046 -44704242 + MER21B LTR ERV1 1 375 -488 2212 129 3 0 chr10 100885046 100885356 -44703932 - AluSq SINE Alu -2 311 1 3925 176 112 15 chr10 100885356 100885561 -44703727 + MER21B LTR ERV1 375 559 -304 4529 148 26 39 chr10 100885561 100885988 -44703300 + LTR39 LTR ERV1 1 432 -351 1761 178 17 3 chr10 100885988 100886286 -44703002 - AluSx SINE Alu -10 302 1 4529 148 26 39 chr10 100886286 100886484 -44702804 + LTR39 LTR ERV1 432 616 -167 2301 94 0 0 chr10 100886484 100886783 -44702505 + AluSx SINE Alu 5 303 -9 4529 148 26 39 chr10 100886783 100886949 -44702339 + LTR39 LTR ERV1 616 783 0 3925 176 112 15 chr10 100886949 100887103 -44702185 + MER21B LTR ERV1 559 852 -11 730 176 163 19 chr10 100887686 100888074 -44701214 - LTR54B LTR ERV1 -8 490 1 1142 148 12 0 chr10 100888098 100888267 -44701021 - FAM SINE Alu -4 171 1 2432 90 0 0 chr10 100888385 100888695 -44700593 - AluSx SINE Alu -2 310 1 1633 181 63 0 chr10 100889188 100889475 -44699813 + AluJo SINE Alu 1 305 -7 306 0 0 0 chr10 100889732 100889766 -44699522 + (T)n Simple_repeat Simple_repeat 1 34 0 2307 96 7 3 chr10 100889848 100890151 -44699137 - AluSp SINE Alu -9 304 1 6735 53 7 72 chr10 100890178 100891416 -44697872 - SVA Other Other -589 1386 432 2507 156 93 69 chr10 100891445 100892232 -44697056 - SVA Other Other -520 866 61 1222 164 9 14 chr10 100892282 100892502 -44696786 + L1PA16 LINE L1 5942 6160 -6 2169 133 0 3 chr10 100892514 100892814 -44696474 + AluSx SINE Alu 3 301 -11 670 215 303 30 chr10 100892819 100892938 -44696350 - L2 LINE L2 -1481 1833 1748 450 0 0 0 chr10 100892938 100892988 -44696300 + (TG)n Simple_repeat Simple_repeat 2 51 0 670 215 303 30 chr10 100892988 100893300 -44695988 - L2 LINE L2 -1566 1748 1284 232 273 0 15 chr10 100893302 100893368 -44695920 - L1MC/D LINE L1 -2273 5535 5471 3065 74 19 78 chr10 100893394 100893486 -44695802 - MLT2A1 LTR ERVL 0 444 348 1821 85 35 27 chr10 100893486 100893746 -44695542 - AluSg SINE Alu -12 298 37 3065 74 19 78 chr10 100893746 100894125 -44695163 - MLT2A1 LTR ERVL -96 348 1 614 186 10 0 chr10 100894168 100894270 -44695018 - FLAM_A SINE Alu -28 114 12 279 184 9 101 chr10 100894301 100894357 -44694931 - L1MC/D LINE L1 -2342 5466 5423 2151 115 0 10 chr10 100894357 100894653 -44694635 + AluSg SINE Alu 3 295 -15 279 184 9 101 chr10 100894653 100894705 -44694583 - L1MC/D LINE L1 -2385 5423 5368 183 42 0 0 chr10 100894711 100894735 -44694553 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1532 101 0 5 chr10 100894847 100895068 -44694220 + AluSc SINE Alu 84 303 0 758 147 9 9 chr10 100895081 100895197 -44694091 + FLAM_C SINE Alu 3 118 -25 29 0 0 0 chr10 100895197 100895226 -44694062 + AT_rich Low_complexity Low_complexity 1 29 0 410 250 82 68 chr10 100895261 100895395 -44693893 + L1M4b LINE L1 11 151 -6708 2031 126 44 0 chr10 100895395 100895688 -44693600 + AluSx SINE Alu 2 307 -5 410 250 82 68 chr10 100895688 100895773 -44693515 + L1M4b LINE L1 151 233 -6626 2468 91 0 0 chr10 100896283 100896590 -44692698 + AluSq SINE Alu 1 307 -6 2702 142 8 49 chr10 100896630 100896940 -44692348 + L1M4b LINE L1 555 841 -6116 1829 141 12 38 chr10 100896940 100897260 -44692028 + AluJo SINE Alu 1 312 0 2702 142 8 49 chr10 100897260 100897420 -44691868 + L1M4b LINE L1 841 1006 -5951 717 157 67 22 chr10 100897482 100897616 -44691672 + FLAM_C SINE Alu 2 141 -2 1611 143 48 7 chr10 100897619 100897636 -44691652 + MER7A DNA MER2_type 65 80 -2958 2210 112 0 0 chr10 100897636 100897941 -44691347 - AluSq SINE Alu -8 305 1 1611 143 48 7 chr10 100897941 100898196 -44691092 + MER7A DNA MER2_type 80 346 0 6141 129 54 68 chr10 100898200 100898597 -44690691 + L1M4b LINE L1 1009 1410 -5547 2821 3 0 0 chr10 100898597 100898908 -44690380 + AluYa5 SINE Alu 1 311 0 6141 129 54 68 chr10 100898908 100899517 -44689771 + L1M4b LINE L1 1410 2026 -4931 846 168 0 0 chr10 100899517 100899648 -44689640 + FLAM_A SINE Alu 3 133 0 6141 129 54 68 chr10 100899648 100899776 -44689512 + L1M4b LINE L1 2026 2128 -4829 2244 63 0 17 chr10 100899776 100900076 -44689212 + AluY SINE Alu 1 295 -16 6141 129 54 68 chr10 100900076 100900173 -44689115 + L1M4b LINE L1 2128 2225 -4732 1230 189 182 72 chr10 100900163 100900293 -44688995 + L1M4b LINE L1 3082 3196 -3761 * 2362 91 0 3 chr10 100900293 100900602 -44688686 + AluSq SINE Alu 1 308 -5 1230 189 182 72 chr10 100900602 100900637 -44688651 + L1M4b LINE L1 3196 3226 -3731 853 135 0 23 chr10 100900637 100900770 -44688518 + FLAM_C SINE Alu 3 132 -1 1230 189 182 72 chr10 100900770 100901096 -44688192 + L1M4b LINE L1 3226 3642 -3315 2200 80 13 3 chr10 100901096 100901397 -44687891 + AluY SINE Alu 1 304 -7 1230 189 182 72 chr10 100901397 100901447 -44687841 + L1M4b LINE L1 3642 3685 -3272 1088 177 31 0 chr10 100901449 100901641 -44687647 - AluJb SINE Alu -5 307 110 281 154 0 0 chr10 100901643 100901695 -44687593 + L1M4b LINE L1 3677 3728 -3229 1501 191 11 66 chr10 100901840 100901960 -44687328 + MLT1A1 LTR MaLR 2 127 -238 4874 79 25 50 chr10 100901960 100902064 -44687224 + LTR8 LTR ERV1 1 106 -585 2502 62 0 0 chr10 100902064 100902373 -44686915 - AluY SINE Alu -2 309 1 4874 79 25 50 chr10 100902373 100902975 -44686313 + LTR8 LTR ERV1 106 690 -1 1501 191 11 66 chr10 100902975 100903058 -44686230 + MLT1A1 LTR MaLR 127 213 -152 2681 164 27 96 chr10 100903058 100903607 -44685681 + LTR9 LTR ERV1 1 499 -113 2091 125 3 0 chr10 100903607 100903910 -44685378 - AluSx SINE Alu -8 304 1 2681 164 27 96 chr10 100903910 100904017 -44685271 + LTR9 LTR ERV1 499 612 0 1501 191 11 66 chr10 100904017 100904105 -44685183 + MLT1A1 LTR MaLR 213 271 -94 1465 171 0 12 chr10 100904105 100904363 -44684925 + AluJo SINE Alu 14 268 -44 1501 191 11 66 chr10 100904363 100904446 -44684842 + MLT1A1 LTR MaLR 271 357 -8 270 188 78 0 chr10 100904966 100905030 -44684258 - MIR3 SINE MIR -38 170 102 588 232 134 16 chr10 100905057 100905251 -44684037 + MIR SINE MIR 44 260 -2 709 255 128 49 chr10 100905306 100905674 -44683614 + L2 LINE L2 2353 2749 -565 2230 100 0 0 chr10 100906288 100906588 -44682700 - AluSg SINE Alu -10 300 1 292 208 0 0 chr10 100906662 100906715 -44682573 - MLT1H LTR MaLR 0 549 497 843 137 8 0 chr10 100906715 100906846 -44682442 + AluJb SINE Alu 1 132 -180 327 232 147 0 chr10 100906847 100906942 -44682346 - MIR SINE MIR -59 149 41 2244 91 3 0 chr10 100906961 100907259 -44682029 - AluSg SINE Alu -11 299 1 4105 115 13 92 chr10 100907660 100907823 -44681465 - LTR8 LTR ERV1 0 691 517 1670 136 68 27 chr10 100907823 100908118 -44681170 - AluSx SINE Alu -3 309 3 4105 115 13 92 chr10 100908118 100908545 -44680743 - LTR8 LTR ERV1 -174 517 170 1742 144 51 0 chr10 100908545 100908837 -44680451 - AluSx SINE Alu -5 307 1 4105 115 13 92 chr10 100908837 100908995 -44680293 - LTR8 LTR ERV1 -521 170 1 618 198 12 80 chr10 100908995 100909149 -44680139 - MER77-int LTR ERV1 -205 3986 3842 1605 198 81 3 chr10 100909149 100909508 -44679780 - MLT1B LTR MaLR 0 390 4 1616 213 21 117 chr10 100909516 100909650 -44679638 - MLT1B-int LTR MaLR -7 1728 1583 933 135 0 0 chr10 100909650 100909783 -44679505 + FLAM_C SINE Alu 1 133 0 1616 213 21 117 chr10 100909783 100909795 -44679493 - MLT1B-int LTR MaLR -152 1583 1571 1992 96 41 3 chr10 100909795 100910088 -44679200 + AluY SINE Alu 1 304 -7 1616 213 21 117 chr10 100910088 100910328 -44678960 - MLT1B-int LTR MaLR -164 1571 1399 2149 98 3 10 chr10 100910328 100910625 -44678663 - AluSx SINE Alu -17 295 1 1616 213 21 117 chr10 100910625 100910747 -44678541 - MLT1B-int LTR MaLR -336 1399 1267 282 215 0 15 chr10 100910827 100910892 -44678396 - MLT1B-int LTR MaLR -992 743 680 572 188 16 36 chr10 100910959 100911137 -44678151 - MLT1-int LTR MaLR -491 880 618 2684 198 84 57 chr10 100911139 100911590 -44677698 - ERVL LTR ERVL -4747 1017 541 2109 125 3 0 chr10 100911590 100911901 -44677387 + AluSx SINE Alu 1 312 0 2684 198 84 57 chr10 100911901 100912102 -44677186 - ERVL LTR ERVL -5223 541 347 2211 99 3 0 chr10 100912102 100912405 -44676883 - AluSp SINE Alu -8 305 2 5144 230 59 69 chr10 100912406 100912961 -44676327 - MER77-int LTR ERV1 -1009 4905 4346 2243 71 17 0 chr10 100912961 100913258 -44676030 - AluSp SINE Alu -11 302 1 5144 230 59 69 chr10 100913258 100913296 -44675992 - MER77-int LTR ERV1 -1568 4346 4309 2855 150 24 96 chr10 100913296 100913955 -44675333 - LTR9 LTR ERV1 0 612 1 5144 230 59 69 chr10 100913955 100914925 -44674363 - MER77-int LTR ERV1 -1605 4309 1677 302 239 102 0 chr10 100915005 100915093 -44674195 - MER77-int LTR ERV1 -2225 4533 4437 914 85 23 0 chr10 100915115 100915245 -44674043 - AluSg/x SINE Alu -23 289 157 259 191 0 0 chr10 100915247 100915289 -44673999 - AluY SINE Alu -127 174 133 2180 96 3 7 chr10 100915289 100915591 -44673697 - AluSp SINE Alu -12 301 1 824 265 26 22 chr10 100915593 100915810 -44673478 - MER77-int LTR ERV1 -2648 1543 1323 2049 112 7 13 chr10 100915810 100916113 -44673175 - AluSq SINE Alu -12 301 1 322 199 206 23 chr10 100916113 100916244 -44673044 - MER77-int LTR ERV1 -3871 320 166 790 184 0 0 chr10 100916248 100916384 -44672904 + FLAM_A SINE Alu 6 141 -1 531 218 21 0 chr10 100916385 100916498 -44672790 - MER77-int LTR ERV1 -3561 3197 52 1472 241 63 81 chr10 100916542 100917120 -44672168 - MER77 LTR ERV1 -6 599 164 1572 216 89 48 chr10 100917154 100917365 -44671923 + L1ME3A LINE L1 5643 5844 -326 2084 105 7 0 chr10 100917365 100917678 -44671610 + AluSq SINE Alu 1 315 0 1572 216 89 48 chr10 100917678 100917946 -44671342 + L1ME3A LINE L1 5844 6143 -27 1648 196 94 0 chr10 100918062 100918414 -44670874 + Charlie1 DNA MER1_type 579 963 -1798 630 96 0 0 chr10 100918422 100918505 -44670783 - AluS SINE Alu -229 84 2 238 103 128 0 chr10 100918512 100918551 -44670737 + Charlie1 DNA MER1_type 972 1015 -1746 * 518 132 33 58 chr10 100918550 100918671 -44670617 + Charlie1 DNA MER1_type 2638 2755 -6 210 158 0 0 chr10 100920780 100920818 -44668470 + A-rich Low_complexity Low_complexity 1 38 0 5240 203 60 111 chr10 100921528 100922618 -44666670 + L1M4 LINE L1 2387 3531 -2615 2198 89 7 0 chr10 100922618 100922922 -44666366 + AluSx SINE Alu 1 306 -6 2257 89 0 0 chr10 100922922 100923215 -44666073 + AluSc SINE Alu 1 293 -16 5240 203 60 111 chr10 100923215 100923619 -44665669 + L1M4 LINE L1 3530 3749 -2397 783 170 230 82 chr10 100923619 100923937 -44665351 + MLT1A1 LTR MaLR 1 365 0 5240 203 60 111 chr10 100923937 100924526 -44664762 + L1M4 LINE L1 3749 4366 -1780 3450 169 13 29 chr10 100924528 100925227 -44664061 - L1MB4 LINE L1 -6 6174 5487 2190 95 3 0 chr10 100925230 100925524 -44663764 - AluSx SINE Alu -17 295 1 1980 204 33 39 chr10 100925529 100925646 -44663642 - L1MB4 LINE L1 -868 5278 5162 2266 75 0 20 chr10 100925646 100925951 -44663337 - AluSp SINE Alu -14 299 1 1980 204 33 39 chr10 100925951 100926406 -44662882 - L1MB4 LINE L1 -984 5162 4706 2176 117 0 0 chr10 100926406 100926715 -44662573 - AluSx SINE Alu -3 309 1 1980 204 33 39 chr10 100926715 100926793 -44662495 - L1MB4 LINE L1 -1440 4706 4629 725 146 62 46 chr10 100926793 100926923 -44662365 - FLAM_C SINE Alu -1 132 1 1980 204 33 39 chr10 100926923 100927169 -44662119 - L1MB4 LINE L1 -1517 4629 2521 2300 80 3 0 chr10 100927211 100927512 -44661776 + AluSp SINE Alu 1 302 -11 396 0 0 0 chr10 100927512 100927556 -44661732 + (TA)n Simple_repeat Simple_repeat 2 45 0 418 265 52 0 chr10 100927569 100927705 -44661583 - L1MB4 LINE L1 -3629 2517 2375 830 162 84 12 chr10 100927721 100927888 -44661400 - AluJo SINE Alu -9 303 125 483 244 8 0 chr10 100927899 100928030 -44661258 - L1MB4 LINE L1 -3802 2344 2213 797 174 16 33 chr10 100928042 100928226 -44661062 + L1M4 LINE L1 4429 4609 -1537 1107 137 106 44 chr10 100928230 100928456 -44660832 + AluJo SINE Alu 66 305 -7 1827 105 0 0 chr10 100928514 100928762 -44660526 + AluSq SINE Alu 59 306 -7 1024 148 69 18 chr10 100928790 100928909 -44660379 + L1MC2 LINE L1 6116 6228 -116 1939 135 16 0 chr10 100928909 100929212 -44660076 + AluSx SINE Alu 2 309 -3 1024 148 69 18 chr10 100929212 100929309 -44659979 + L1MC2 LINE L1 6228 6343 -1 1638 169 3 3 chr10 100929763 100930065 -44659223 - AluJo SINE Alu -10 302 1 452 268 35 7 chr10 100930069 100930211 -44659077 + L2 LINE L2 3164 3309 -4 2164 92 0 7 chr10 100930317 100930612 -44658676 + AluSg SINE Alu 1 293 -17 455 258 23 8 chr10 100930613 100930745 -44658543 - L2 LINE L2 -953 2361 2228 1992 105 23 7 chr10 100930746 100931051 -44658237 + AluSp SINE Alu 1 310 -3 453 101 14 72 chr10 100931562 100931700 -44657588 + (TTCC)n Simple_repeat Simple_repeat 2 131 0 2308 92 0 13 chr10 100931700 100932014 -44657274 - AluSg SINE Alu 0 310 1 1684 183 0 0 chr10 100932016 100932306 -44656982 - AluJb SINE Alu -17 295 6 711 147 85 16 chr10 100932533 100932662 -44656626 - FLAM_C SINE Alu 0 143 6 310 26 77 0 chr10 100932878 100932917 -44656371 + LTR8 LTR ERV1 546 587 -104 28 29 0 0 chr10 100932917 100932952 -44656336 + AT_rich Low_complexity Low_complexity 1 35 0 271 81 0 0 chr10 100933134 100933171 -44656117 + AluYb8 SINE Alu 148 184 -124 250 350 17 17 chr10 100933205 100933325 -44655963 - MLT1L LTR MaLR -152 463 344 2270 100 0 0 chr10 100933854 100934155 -44655133 - AluSx SINE Alu -11 301 1 1009 181 0 0 chr10 100934186 100934363 -44654925 - FRAM SINE Alu 0 176 1 1682 148 3 46 chr10 100934367 100934699 -44654589 - AluJo SINE Alu 0 312 1 1695 156 17 0 chr10 100934843 100935138 -44654150 + AluJo SINE Alu 1 300 -12 2097 94 0 0 chr10 100935143 100935420 -44653868 + AluSg SINE Alu 1 277 -33 583 99 0 0 chr10 100935551 100935632 -44653656 + MER41A LTR ERV1 315 395 -159 1799 103 19 4 chr10 100935634 100935905 -44653383 - AluSx SINE Alu -37 275 1 722 168 67 0 chr10 100935928 100936047 -44653241 - FLAM_C SINE Alu -6 127 1 354 45 0 0 chr10 100936279 100936323 -44652965 + (CA)n Simple_repeat Simple_repeat 1 44 0 517 176 8 50 chr10 100936327 100936446 -44652842 - FLAM_A SINE Alu -9 133 20 1950 128 0 3 chr10 100936479 100936768 -44652520 - AluSx SINE Alu -24 288 1 229 310 103 19 chr10 100937152 100937307 -44651981 + MLT1K LTR MaLR 183 350 -238 247 278 83 69 chr10 100937351 100937495 -44651793 + MLT1K LTR MaLR 434 579 -9 851 147 0 0 chr10 100937556 100937692 -44651596 - AluJb SINE Alu -16 296 161 800 237 52 0 chr10 100937858 100938031 -44651257 + MER5A DNA MER1_type 8 189 0 2008 119 3 0 chr10 100938078 100938373 -44650915 - AluY SINE Alu -15 296 1 329 194 0 30 chr10 100938543 100938610 -44650678 + MIR SINE MIR 2 66 -196 1584 177 122 60 chr10 100938659 100939127 -44650161 + Charlie4a DNA MER1_type 1 497 -11 2497 64 3 0 chr10 100940756 100941068 -44648220 + AluSp SINE Alu 1 313 0 1776 156 45 36 chr10 100941259 100941430 -44647858 - MER2 DNA MER2_type 0 345 168 2160 92 3 7 chr10 100941430 100941723 -44647565 - AluSx SINE Alu -20 292 1 1776 156 45 36 chr10 100941723 100941884 -44647404 - MER2 DNA MER2_type -177 168 10 340 267 122 29 chr10 100941928 100942100 -44647188 - MIR SINE MIR -74 188 1 1815 151 24 7 chr10 100942313 100942611 -44646677 + AluSx SINE Alu 1 303 -9 1227 119 0 0 chr10 100943022 100943198 -44646090 + AluSg/x SINE Alu 122 297 -15 183 42 0 0 chr10 100943256 100943280 -44646008 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 714 207 0 50 chr10 100943439 100943579 -44645709 - FLAM_A SINE Alu 0 133 1 1892 115 4 4 chr10 100943582 100943851 -44645437 - AluSx SINE Alu -43 269 1 1513 132 9 0 chr10 100943909 100944137 -44645151 - AluSg/x SINE Alu -17 295 66 1024 154 174 40 chr10 100944155 100944303 -44644985 - L1MC2 LINE L1 -362 5982 5855 1785 127 6 40 chr10 100944303 100944626 -44644662 - AluSx SINE Alu 0 312 1 1024 154 174 40 chr10 100944626 100944730 -44644558 - L1MC2 LINE L1 -489 5855 5696 437 244 0 0 chr10 100944730 100944812 -44644476 - FLAM_A SINE Alu -60 82 1 690 80 89 0 chr10 100944815 100944927 -44644361 - L1MC/D LINE L1 -904 5440 5319 1822 155 3 10 chr10 100944933 100945229 -44644059 + AluSq SINE Alu 5 298 -15 2033 114 0 7 chr10 100945241 100945538 -44643750 - AluSg SINE Alu -15 295 1 2251 113 0 0 chr10 100945563 100945873 -44643415 - AluSg SINE Alu 0 310 1 1307 178 0 13 chr10 100945940 100946165 -44643123 - AluJb SINE Alu -90 222 1 705 126 0 0 chr10 100946169 100946272 -44643016 + AluJb SINE Alu 210 312 0 891 251 137 14 chr10 100946273 100946559 -44642729 - L1M4 LINE L1 -346 5838 5512 605 195 81 0 chr10 100946562 100946685 -44642603 + AluJo SINE Alu 2 134 -178 2198 61 6 35 chr10 100946691 100947003 -44642285 + AluY SINE Alu 1 303 -8 29 28 0 0 chr10 100947004 100947040 -44642248 + AT_rich Low_complexity Low_complexity 1 36 0 419 233 35 64 chr10 100947148 100947320 -44641968 + LTR41 LTR ERVL 597 763 -10 2513 90 0 0 chr10 100947371 100947683 -44641605 + AluSx SINE Alu 1 312 0 2490 97 0 0 chr10 100947696 100948005 -44641283 + AluSx SINE Alu 1 309 -3 5355 142 47 21 chr10 100948449 100949309 -44639979 + L1M1 LINE L1 1578 2465 -5100 2151 110 7 0 chr10 100949309 100949599 -44639689 + AluSq SINE Alu 5 296 -17 5355 142 47 21 chr10 100949599 100949648 -44639640 + L1M1 LINE L1 2465 2511 -5054 2343 102 3 0 chr10 100949648 100949951 -44639337 - AluSq SINE Alu -8 305 2 903 68 8 17 chr10 100950034 100950151 -44639137 - AluSp SINE Alu -181 132 17 2065 142 0 7 chr10 100950918 100951227 -44638061 + AluSx SINE Alu 2 308 -4 1887 129 97 47 chr10 100951231 100951389 -44637899 + MLT1A1 LTR MaLR 5 154 -211 2051 136 7 3 chr10 100951389 100951684 -44637604 + AluSq SINE Alu 1 296 -17 1887 129 97 47 chr10 100951684 100951865 -44637423 + MLT1A1 LTR MaLR 154 361 -4 378 178 39 5 chr10 100951865 100951965 -44637323 + L1MC4a LINE L1 7122 7280 -611 261 0 0 0 chr10 100952024 100952053 -44637235 + (CA)n Simple_repeat Simple_repeat 2 30 0 1576 203 20 45 chr10 100952053 100952261 -44637027 + L1MC4a LINE L1 7401 7613 -429 2327 117 0 0 chr10 100952261 100952570 -44636718 + AluSg SINE Alu 1 309 -1 1576 203 20 45 chr10 100952570 100952765 -44636523 + L1MC4a LINE L1 7613 8028 -14 1872 110 27 107 chr10 100952765 100952974 -44636314 - AluSx SINE Alu -2 310 137 2159 113 3 0 chr10 100952974 100953256 -44636032 - AluSp SINE Alu -30 283 1 1872 110 27 107 chr10 100953256 100953383 -44635905 - AluSx SINE Alu -175 137 1 1865 128 50 4 chr10 100953384 100953665 -44635623 - AluSg SINE Alu -16 294 1 336 308 17 8 chr10 100953699 100953816 -44635472 + L1MC4 LINE L1 5815 5932 -1876 388 111 28 0 chr10 100953826 100953898 -44635390 + (CA)n Simple_repeat Simple_repeat 1 74 0 242 213 41 65 chr10 100954465 100954535 -44634753 - AluJ/FLAM SINE Alu -239 63 5 698 80 89 0 chr10 100954541 100954653 -44634635 + L1MC/D LINE L1 5319 5440 -904 432 244 0 0 chr10 100954656 100954738 -44634550 + FRAM/FAM SINE Alu 1 82 -103 1026 156 160 37 chr10 100954738 100954842 -44634446 + L1MC2 LINE L1 5696 5786 -558 1904 127 6 40 chr10 100954842 100955165 -44634123 + AluSx SINE Alu 1 312 0 1026 156 160 37 chr10 100955165 100955304 -44633984 + L1MC2 LINE L1 5786 5969 -375 1605 128 8 20 chr10 100955309 100955558 -44633730 + AluSx SINE Alu 50 295 -17 2209 72 72 0 chr10 100955616 100955893 -44633395 + AluSp SINE Alu 1 297 -16 728 104 57 0 chr10 100955895 100956001 -44633287 - LTR54B LTR ERV1 -377 121 10 1488 159 61 64 chr10 100956010 100956247 -44633041 - MER67B LTR ERV1 0 661 424 1629 156 42 10 chr10 100956247 100956535 -44632753 - AluJo SINE Alu -15 297 1 1488 159 61 64 chr10 100956535 100956623 -44632665 - MER67B LTR ERV1 -237 424 337 2316 99 0 0 chr10 100956623 100956915 -44632373 - AluSx SINE Alu -18 294 3 523 151 11 21 chr10 100957015 100957108 -44632180 + AluJ/FLAM SINE Alu 2 93 -219 22 0 0 0 chr10 100957306 100957328 -44631960 + AT_rich Low_complexity Low_complexity 1 22 0 339 164 0 0 chr10 100957328 100957389 -44631899 + (TG)n Simple_repeat Simple_repeat 2 62 0 359 270 0 0 chr10 100957396 100957485 -44631803 + L1MC4 LINE L1 6615 6703 -1339 2180 114 3 13 chr10 100958160 100958467 -44630821 - AluSx SINE Alu -8 304 1 246 214 168 8 chr10 100958572 100958703 -44630585 + L1ME LINE L1 5174 5325 -821 1087 171 22 57 chr10 100958709 100958937 -44630351 + AluJo SINE Alu 1 220 -92 381 148 0 16 chr10 100958937 100958998 -44630290 + AluSq/x SINE Alu 86 145 -158 577 78 0 0 chr10 100959093 100959170 -44630118 + AluSg/x SINE Alu 173 249 -63 1185 154 0 88 chr10 100959171 100959239 -44630049 + AluJo SINE Alu 85 157 -155 2328 97 3 0 chr10 100959239 100959537 -44629751 + AluSp SINE Alu 1 299 -14 1185 154 0 88 chr10 100959537 100959695 -44629593 + AluJo SINE Alu 157 291 -21 496 180 50 22 chr10 100959705 100959844 -44629444 + L1ME LINE L1 5345 5487 -675 430 119 60 0 chr10 100959844 100959911 -44629377 + HY5 scRNA scRNA 1 71 -13 444 193 92 46 chr10 100959930 100959945 -44629343 + L1ME LINE L1 5470 5483 -681 2425 72 0 0 chr10 100959945 100960280 -44629008 + AluY SINE Alu 1 311 0 444 193 92 46 chr10 100960280 100960373 -44628915 + L1ME LINE L1 5483 5583 -581 301 236 127 18 chr10 100960479 100960589 -44628699 + L1ME LINE L1 5566 5687 -483 2238 116 3 0 chr10 100960589 100960890 -44628398 - AluSp SINE Alu -10 303 2 490 128 53 0 chr10 100960921 100961015 -44628273 + AluY SINE Alu 210 308 -3 259 262 0 0 chr10 100961034 100961095 -44628193 - MER5A DNA MER1_type -1 188 128 28 48 0 0 chr10 100961225 100961267 -44628021 + AT_rich Low_complexity Low_complexity 1 42 0 1804 173 3 0 chr10 100961276 100961560 -44627728 + AluJb SINE Alu 1 285 -27 378 0 0 0 chr10 100961582 100961624 -44627664 + (TC)n Simple_repeat Simple_repeat 2 43 0 234 0 0 0 chr10 100961623 100961649 -44627639 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 2932 171 39 10 chr10 100961959 100962561 -44626727 + MER39 LTR ERV1 1 707 0 483 204 78 0 chr10 100962561 100962664 -44626624 - MER58 DNA MER1_type -56 285 175 2163 127 3 13 chr10 100962790 100963232 -44626056 - AluSx SINE Alu 0 439 1 2332 91 3 0 chr10 100963237 100963535 -44625753 - AluSx SINE Alu -13 299 1 252 116 23 0 chr10 100963535 100963578 -44625710 - LTR54B LTR ERV1 -280 218 175 1564 137 0 9 chr10 100963630 100963857 -44625431 + AluSx SINE Alu 1 225 -87 3925 176 112 15 chr10 100964309 100964463 -44624825 - MER21B LTR ERV1 -11 852 714 4603 145 26 38 chr10 100964463 100964629 -44624659 - LTR39 LTR ERV1 0 783 617 2323 90 0 0 chr10 100964629 100964928 -44624360 - AluSx SINE Alu -9 303 5 4603 145 26 38 chr10 100964928 100965125 -44624163 - LTR39 LTR ERV1 -166 617 419 1761 178 17 3 chr10 100965125 100965423 -44623865 + AluSx SINE Alu 1 302 -10 4603 145 26 38 chr10 100965423 100965850 -44623438 - LTR39 LTR ERV1 -364 419 1 3925 176 112 15 chr10 100965850 100966055 -44623233 - MER21B LTR ERV1 -149 714 530 2212 129 3 0 chr10 100966055 100966365 -44622923 + AluSq SINE Alu 1 311 -2 3925 176 112 15 chr10 100966365 100966781 -44622507 - MER21B LTR ERV1 -333 530 1 2121 98 13 20 chr10 100966868 100967174 -44622114 - AluSx SINE Alu -6 306 3 1795 149 26 13 chr10 100967273 100967581 -44621707 + AluJo SINE Alu 1 312 0 2442 55 0 23 chr10 100967588 100967898 -44621390 + AluY SINE Alu 1 303 -8 279 268 0 0 chr10 100967969 100968040 -44621248 - L1ME LINE L1 -664 5498 5428 407 236 89 8 chr10 100968058 100968181 -44621107 + L1MEc LINE L1 2106 2238 -4158 2444 84 3 0 chr10 100968222 100968532 -44620756 + AluSp SINE Alu 3 313 0 286 248 158 0 chr10 100968534 100968635 -44620653 - L1ME1 LINE L1 -115 6051 5935 * 651 232 112 6 chr10 100968632 100968894 -44620394 - L1ME LINE L1 -727 5439 5157 1515 160 10 55 chr10 100968898 100969009 -44620279 + AluJo SINE Alu 6 120 -192 428 35 17 0 chr10 100969009 100969067 -44620221 + (TA)n Simple_repeat Simple_repeat 2 60 0 2167 77 0 87 chr10 100969067 100969390 -44619898 - AluSq SINE Alu -18 295 1 1515 160 10 55 chr10 100969390 100969589 -44619699 + AluJo SINE Alu 118 303 -9 1157 154 266 0 chr10 100969711 100969944 -44619344 - AluJo SINE Alu -6 296 2 1060 146 0 50 chr10 100969965 100970152 -44619136 - AluSg/x SINE Alu 0 310 132 2307 89 3 10 chr10 100970152 100970445 -44618843 - AluSx SINE Alu -21 291 1 1060 146 0 50 chr10 100970445 100970456 -44618832 - AluSg/x SINE Alu -178 132 122 3055 233 148 50 chr10 100970458 100970520 -44618768 - L1ME LINE L1 -1163 4983 4928 2241 100 3 3 chr10 100970520 100970820 -44618468 - AluSx SINE Alu -12 300 1 3055 233 148 50 chr10 100970820 100971092 -44618196 - L1ME LINE L1 -1218 4928 4684 2040 147 7 0 chr10 100971092 100971384 -44617904 - AluJb SINE Alu -16 296 3 1937 138 3 24 chr10 100971388 100971685 -44617603 - AluJo SINE Alu -20 292 2 3055 233 148 50 chr10 100971685 100972162 -44617126 - L1ME LINE L1 -1464 4682 4253 2278 109 0 3 chr10 100972162 100972466 -44616822 + AluSq SINE Alu 1 303 -10 3055 233 148 50 chr10 100972466 100972622 -44616666 - L1ME LINE L1 -1893 4253 4114 2195 118 13 0 chr10 100972622 100972926 -44616362 - AluSx SINE Alu -4 308 1 2434 85 0 10 chr10 100972929 100973234 -44616054 - AluSg SINE Alu -8 302 1 3055 233 148 50 chr10 100973234 100973741 -44615547 - L1ME LINE L1 -2033 4113 3352 631 235 29 74 chr10 100973805 100974048 -44615240 + L1MC4 LINE L1 7811 8042 0 312 27 0 0 chr10 100974218 100974255 -44615033 + (CAA)n Simple_repeat Simple_repeat 3 39 0 237 203 78 16 chr10 100974352 100974416 -44614872 + L1ME4a LINE L1 5955 6022 -99 1973 78 59 78 chr10 100974458 100974765 -44614523 - AluSx SINE Alu -11 301 1 236 286 29 0 chr10 100975151 100975221 -44614067 + MIR SINE MIR 81 152 -110 2205 112 0 16 chr10 100975258 100975572 -44613716 + AluSx SINE Alu 1 309 -3 2254 121 0 16 chr10 100979222 100979537 -44609751 + AluSx SINE Alu 1 310 -2 2178 123 6 25 chr10 100980585 100980903 -44608385 + AluSx SINE Alu 1 312 0 408 271 16 0 chr10 100981022 100981144 -44608144 - MIR SINE MIR -93 169 46 285 355 151 0 chr10 100981310 100981482 -44607806 - MIR SINE MIR -6 256 59 414 227 104 65 chr10 100982260 100982414 -44606874 + MER103 DNA DNA 6 165 -1 2663 62 0 0 chr10 100982517 100982825 -44606463 - AluSg SINE Alu -2 308 1 683 154 0 0 chr10 100982827 100982937 -44606351 - FLAM_A SINE Alu -13 129 20 2407 80 0 29 chr10 100983850 100984162 -44605126 - AluSg SINE Alu -7 303 1 841 70 93 0 chr10 100984536 100984665 -44604623 + MER30 DNA MER1_type 1 141 -89 2144 132 0 0 chr10 100984877 100985166 -44604122 - AluSx SINE Alu -23 289 1 2135 127 0 3 chr10 100985389 100985681 -44603607 - AluSx SINE Alu -21 291 1 2226 88 3 36 chr10 100985693 100985999 -44603289 - AluY SINE Alu -15 296 1 2052 140 7 7 chr10 100986270 100986570 -44602718 + AluSx SINE Alu 6 305 -7 2208 72 54 4 chr10 100986570 100986849 -44602439 + AluSp SINE Alu 1 293 -20 727 236 77 21 chr10 100986860 100987093 -44602195 + MIR SINE MIR 5 250 -12 942 184 6 0 chr10 100987147 100987315 -44601973 + FRAM SINE Alu 1 169 -7 342 294 59 0 chr10 100987315 100987417 -44601871 - MIR SINE MIR -69 139 32 2274 93 3 0 chr10 100988912 100989201 -44600087 - AluSx SINE Alu -22 290 1 252 345 50 25 chr10 100989228 100989347 -44599941 + L2 LINE L2 3104 3225 -47 187 359 76 0 chr10 100989492 100989584 -44599704 - L2 LINE L2 -26 3246 3148 1059 166 0 0 chr10 100990321 100990484 -44598804 + FRAM SINE Alu 6 168 -8 2112 143 0 0 chr10 100990547 100990848 -44598440 - AluSx SINE Alu -11 301 1 2471 87 0 0 chr10 100990849 100991149 -44598139 - AluSx SINE Alu -12 300 1 566 161 0 0 chr10 100991187 100991280 -44598008 + AluSg/x SINE Alu 216 308 -2 1511 184 37 27 chr10 100991309 100991603 -44597685 - AluJo SINE Alu -15 297 1 228 200 20 0 chr10 100993565 100993615 -44595673 + MIR SINE MIR 47 97 -165 1956 133 45 0 chr10 100993661 100993947 -44595341 - AluJo SINE Alu -13 299 1 695 251 59 10 chr10 100994000 100994203 -44595085 - MIR SINE MIR -44 218 6 3365 211 81 7 chr10 100994621 100995475 -44593813 - L1MD3 LINE L1 -13 7982 7066 471 195 11 0 chr10 100995470 100995557 -44593731 + L1MD3 LINE L1 7140 7227 -768 * 472 259 68 12 chr10 100995617 100995779 -44593509 - MIR SINE MIR -90 172 2 1300 116 84 0 chr10 100995945 100996135 -44593153 - AluSg/x SINE Alu -11 299 94 2341 71 20 7 chr10 100996871 100997168 -44592120 - AluSc SINE Alu -8 301 1 2284 62 42 3 chr10 100997173 100997461 -44591827 - AluY SINE Alu -12 299 1 2232 114 3 3 chr10 100997930 100998237 -44591051 + AluSx SINE Alu 1 307 -5 1626 171 0 40 chr10 100998297 100998596 -44590692 - AluJb SINE Alu -21 291 5 1164 139 24 14 chr10 100998715 100998924 -44590364 - L1MA5A LINE L1 0 6297 6087 21 71 0 0 chr10 101000028 101000070 -44589218 + AT_rich Low_complexity Low_complexity 1 42 0 2272 110 0 3 chr10 101000407 101000706 -44588582 - AluSq SINE Alu -15 298 1 755 206 0 0 chr10 101000731 101000857 -44588431 - FLAM_A SINE Alu -7 126 1 631 234 0 0 chr10 101001087 101001194 -44588094 + FLAM_A SINE Alu 4 110 -32 * 644 65 0 0 chr10 101001189 101001266 -44588022 - AluS SINE Alu -234 78 2 1914 137 3 17 chr10 101001389 101001688 -44587600 - AluJb SINE Alu -17 295 1 22 0 0 0 chr10 101002164 101002186 -44587102 + AT_rich Low_complexity Low_complexity 1 22 0 303 122 0 0 chr10 101003832 101003881 -44585407 + (TG)n Simple_repeat Simple_repeat 1 49 0 180 306 42 42 chr10 101004361 101004433 -44584855 - MIR SINE MIR -90 118 47 1416 230 35 60 chr10 101004496 101004927 -44584361 - L2 LINE L2 -2 3311 2892 893 143 0 38 chr10 101004992 101005125 -44584163 - FLAM_C SINE Alu -5 128 1 913 143 97 19 chr10 101005527 101005681 -44583607 + FRAM SINE Alu 1 166 0 2188 64 89 0 chr10 101007031 101007311 -44581977 - AluY SINE Alu -6 305 1 182 293 0 0 chr10 101007349 101007390 -44581898 - L3b LINE CR1 -353 1230 1190 1781 227 90 34 chr10 101007915 101008360 -44580928 + MLT1F LTR MaLR 1 470 -72 2165 103 0 22 chr10 101008361 101008672 -44580616 + AluSg SINE Alu 1 304 -6 2121 150 0 0 chr10 101008687 101008994 -44580294 + AluSx SINE Alu 6 312 0 1538 191 24 10 chr10 101009009 101009302 -44579986 + AluJo SINE Alu 3 299 -13 2308 86 30 0 chr10 101009346 101009650 -44579638 - AluSp SINE Alu 0 313 1 343 197 15 0 chr10 101009655 101009721 -44579567 + MLT1F LTR MaLR 499 565 -2 1688 147 25 14 chr10 101009892 101010192 -44579096 + AluJo SINE Alu 1 303 0 2279 122 0 3 chr10 101010298 101010609 -44578679 + AluSq SINE Alu 1 310 -3 254 333 160 0 chr10 101010998 101011142 -44578146 - L3b LINE CR1 -124 1459 1293 2051 134 13 0 chr10 101012027 101012326 -44576962 - AluSx SINE Alu -9 303 1 1788 162 28 0 chr10 101012338 101012628 -44576660 - AluSx SINE Alu -14 298 1 2210 122 0 3 chr10 101012727 101013031 -44576257 + AluSg SINE Alu 1 303 -7 207 0 0 0 chr10 101013164 101013187 -44576101 + (A)n Simple_repeat Simple_repeat 1 23 0 256 122 0 69 chr10 101013195 101013258 -44576030 + Alu SINE Alu 251 293 -9 2042 92 81 0 chr10 101013501 101013774 -44575514 + AluSc SINE Alu 1 295 -14 1724 189 3 13 chr10 101015190 101015502 -44573786 + AluJo SINE Alu 4 312 0 732 75 11 0 chr10 101015742 101015835 -44573453 - AluSq SINE Alu -86 227 134 2348 104 0 0 chr10 101015835 101016142 -44573146 - AluSq SINE Alu -6 307 1 2388 90 0 0 chr10 101016214 101016514 -44572774 + AluY SINE Alu 5 304 -7 442 113 0 0 chr10 101017621 101017683 -44571605 - Alu SINE Alu -10 302 241 1682 161 71 21 chr10 101018319 101018599 -44570689 - AluJo SINE Alu -18 294 1 822 172 0 22 chr10 101018691 101018825 -44570463 + FLAM_C SINE Alu 1 131 -2 206 292 42 83 chr10 101019244 101019288 -44570000 + MIR3 SINE MIR 92 136 -72 2068 99 48 7 chr10 101019288 101019448 -44569840 - AluSx SINE Alu -7 305 153 2436 93 0 0 chr10 101019448 101019750 -44569538 - AluSg SINE Alu -8 302 1 2068 99 48 7 chr10 101019750 101019882 -44569406 - AluSx SINE Alu -159 153 1 206 292 42 83 chr10 101019882 101019957 -44569331 + MIR3 SINE MIR 136 206 -2 2226 106 7 0 chr10 101020114 101020406 -44568882 - AluSx SINE Alu -18 294 1 2233 129 0 0 chr10 101020735 101021045 -44568243 + AluSx SINE Alu 1 310 -2 401 356 62 38 chr10 101021045 101021468 -44567820 + L3 LINE CR1 37 525 -1052 499 300 14 0 chr10 101021528 101021668 -44567620 + L3 LINE CR1 1362 1503 -74 594 155 21 0 chr10 101021678 101021775 -44567513 - MER2 DNA MER2_type -246 99 1 223 200 0 0 chr10 101021786 101021821 -44567467 + MIR3 SINE MIR 146 180 -28 222 250 21 0 chr10 101021821 101021834 -44567454 + L3 LINE CR1 1518 1566 -11 191 274 0 20 chr10 101022519 101022570 -44566718 - MIR3 SINE MIR -5 203 154 1385 138 23 23 chr10 101022572 101022705 -44566583 + AluSq SINE Alu 1 136 -177 2405 80 3 3 chr10 101022705 101023007 -44566281 + AluSq SINE Alu 1 302 -11 1385 138 23 23 chr10 101023007 101023090 -44566198 + AluSq SINE Alu 135 217 -96 1031 209 60 48 chr10 101023375 101023417 -44565871 - L1M4 LINE L1 -973 5173 5133 1787 108 154 0 chr10 101023417 101023676 -44565612 - AluSq SINE Alu -4 299 1 1943 143 7 0 chr10 101023676 101023962 -44565326 - AluJb SINE Alu -24 288 1 1031 209 60 48 chr10 101023962 101024233 -44565055 - L1M4 LINE L1 -1012 5134 4855 2335 95 3 0 chr10 101024247 101024542 -44564746 + AluSp SINE Alu 1 296 -17 1482 184 41 0 chr10 101024543 101024814 -44564474 + L1MB2 LINE L1 5740 6021 -150 821 224 8 46 chr10 101024822 101025059 -44564229 - L1M4 LINE L1 -1286 4860 4633 1765 98 0 0 chr10 101025075 101025300 -44563988 + AluSg/x SINE Alu 84 308 -2 2005 140 3 13 chr10 101025309 101025623 -44563665 + AluSx SINE Alu 1 311 -1 2318 96 3 0 chr10 101025623 101025924 -44563364 + AluSc SINE Alu 1 303 -6 2361 98 0 3 chr10 101025924 101026230 -44563058 + AluSq SINE Alu 1 305 -8 969 185 6 0 chr10 101026230 101026403 -44562885 + AluJo/FRAM SINE Alu 139 312 0 1231 204 40 67 chr10 101026413 101026814 -44562474 - L1M4 LINE L1 -1540 4606 4217 720 163 32 24 chr10 101027381 101027504 -44561784 + FLAM_C SINE Alu 3 126 -17 522 165 0 44 chr10 101027575 101027666 -44561622 - AluJb SINE Alu -188 124 38 2389 81 3 0 chr10 101027951 101028249 -44561039 - AluSp SINE Alu -14 299 1 30 59 0 0 chr10 101028716 101028767 -44560521 + AT_rich Low_complexity Low_complexity 1 51 0 385 149 119 82 chr10 101028781 101028915 -44560373 + L1MC5 LINE L1 7760 7898 -63 23 0 0 0 chr10 101029141 101029164 -44560124 + AT_rich Low_complexity Low_complexity 1 23 0 940 261 138 51 chr10 101029677 101030375 -44558913 - L2 LINE L2 0 3313 2554 26 30 0 0 chr10 101030458 101030491 -44558797 + AT_rich Low_complexity Low_complexity 1 33 0 947 125 0 22 chr10 101032663 101032799 -44556489 + FLAM_C SINE Alu 1 133 0 2093 143 0 6 chr10 101033542 101033856 -44555432 + AluSx SINE Alu 1 312 0 2006 163 0 0 chr10 101033870 101034171 -44555117 + AluJb SINE Alu 1 301 -11 26 101 0 0 chr10 101034543 101034632 -44554656 + AT_rich Low_complexity Low_complexity 1 89 0 199 139 0 79 chr10 101034847 101034948 -44554340 + (TA)n Simple_repeat Simple_repeat 1 93 0 187 117 0 99 chr10 101035023 101035134 -44554154 + (TA)n Simple_repeat Simple_repeat 2 101 0 2104 140 0 3 chr10 101035334 101035634 -44553654 - AluSx SINE Alu -13 299 1 275 250 42 62 chr10 101036252 101036348 -44552940 + L2 LINE L2 3136 3229 -43 732 281 69 32 chr10 101037101 101037347 -44551941 - MIR SINE MIR -7 255 1 2185 129 0 0 chr10 101037419 101037722 -44551566 - AluSx SINE Alu -7 305 3 241 269 21 0 chr10 101037862 101037955 -44551333 + (TA)n Simple_repeat Simple_repeat 2 96 0 604 239 147 0 chr10 101037998 101038182 -44551106 - L2 LINE L2 -1 3312 3102 406 263 170 30 chr10 101038196 101038466 -44550822 - L1ME4a LINE L1 -292 5829 5522 1013 168 44 62 chr10 101038666 101038892 -44550396 - AluJo SINE Alu -11 301 80 2508 53 0 7 chr10 101039493 101039792 -44549496 - AluY SINE Alu -14 297 1 2325 69 7 0 chr10 101039792 101040081 -44549207 - AluSp SINE Alu -12 301 11 23 0 0 0 chr10 101040428 101040451 -44548837 + AT_rich Low_complexity Low_complexity 1 23 0 1212 164 3 104 chr10 101040457 101040756 -44548532 + AluJb SINE Alu 24 292 -20 3709 74 53 2 chr10 101041193 101041681 -44547607 - LTR10D LTR ERV1 0 513 1 196 269 19 0 chr10 101041905 101041957 -44547331 + L2 LINE L2 2284 2336 -978 721 293 87 59 chr10 101042059 101042549 -44546739 + L2 LINE L2 2563 3084 -229 2060 125 7 13 chr10 101042549 101042852 -44546436 - AluSq SINE Alu -12 301 1 721 293 87 59 chr10 101042852 101043088 -44546200 + L2 LINE L2 3084 3312 -1 443 209 148 9 chr10 101043081 101043196 -44546092 + MIR SINE MIR 88 218 -44 * 1226 186 23 43 chr10 101043211 101043512 -44545776 + AluY SINE Alu 1 295 -16 1761 174 3 7 chr10 101043517 101043822 -44545466 - AluJb SINE Alu -8 304 1 517 267 91 6 chr10 101043920 101044085 -44545203 - MIR SINE MIR -4 258 80 2201 107 7 7 chr10 101044226 101044525 -44544763 - AluSg SINE Alu -11 299 1 2247 109 0 0 chr10 101044747 101045041 -44544247 + AluSx SINE Alu 1 294 -18 1919 110 17 52 chr10 101045049 101045340 -44543948 + AluSc SINE Alu 1 281 -28 842 182 107 0 chr10 101045498 101045657 -44543631 + AluSg/x SINE Alu 137 312 0 321 274 35 109 chr10 101045674 101045875 -44543413 - HAL1 LINE L1 -13 2494 2309 1896 138 7 14 chr10 101045876 101046188 -44543100 - AluJb SINE Alu 0 310 1 1115 176 14 9 chr10 101046231 101046441 -44542847 - AluJo SINE Alu -91 221 11 368 229 208 22 chr10 101046452 101046635 -44542653 - HAL1 LINE L1 -184 2323 2107 2387 103 3 0 chr10 101046668 101046978 -44542310 + AluSx SINE Alu 1 311 -1 2464 91 0 0 chr10 101047005 101047314 -44541974 + AluSg SINE Alu 1 309 -1 438 158 134 85 chr10 101047319 101047346 -44541942 - HAL1 LINE L1 -1104 1403 1379 2445 78 3 0 chr10 101047346 101047652 -44541636 - AluY SINE Alu -4 307 1 438 158 134 85 chr10 101047652 101047788 -44541500 - HAL1 LINE L1 -1128 1379 1232 285 224 60 0 chr10 101047803 101047870 -44541418 - L1ME4a LINE L1 -96 6025 5955 729 180 12 99 chr10 101047907 101048068 -44541220 - BC200 scRNA scRNA -53 147 1 1070 173 22 11 chr10 101048131 101048316 -44540972 + AluJb SINE Alu 107 293 -19 2467 69 0 7 chr10 101048320 101048624 -44540664 + AluY SINE Alu 1 302 -9 2185 130 3 0 chr10 101048720 101049028 -44540260 + AluSp SINE Alu 2 310 -3 1791 142 0 48 chr10 101049041 101049197 -44540091 - AluSx SINE Alu -31 281 144 2441 87 3 3 chr10 101049197 101049507 -44539781 - AluSp SINE Alu -3 310 1 1791 142 0 48 chr10 101049507 101049645 -44539643 - AluSx SINE Alu -168 144 1 188 260 0 60 chr10 101049686 101049736 -44539552 + L2 LINE L2 3186 3232 -40 598 207 43 75 chr10 101049759 101049851 -44539437 + L1MC5 LINE L1 7314 7399 -562 2107 108 0 35 chr10 101049851 101050167 -44539121 + AluSq SINE Alu 1 305 -8 598 207 43 75 chr10 101050167 101050262 -44539026 + L1MC5 LINE L1 7399 7495 -466 948 112 22 15 chr10 101050262 101050396 -44538892 + AluSq/x SINE Alu 1 135 -178 2064 125 0 0 chr10 101050396 101050724 -44538564 + AluSg SINE Alu 1 328 0 2067 120 13 7 chr10 101050747 101051046 -44538242 + AluSx SINE Alu 1 301 -11 2178 106 10 13 chr10 101051048 101051359 -44537929 + AluSx SINE Alu 1 310 -2 1185 201 146 0 chr10 101051367 101051675 -44537613 + L1ME3A LINE L1 5808 6160 -10 700 218 51 88 chr10 101051725 101052078 -44537210 + L1MC5 LINE L1 7521 7860 -101 2333 100 16 3 chr10 101052281 101052590 -44536698 - AluSp SINE Alu 0 313 1 2253 108 0 10 chr10 101052590 101052896 -44536392 - AluSq SINE Alu -6 307 5 314 308 105 21 chr10 101053135 101053278 -44536010 - L2 LINE L2 0 3313 3159 2198 97 0 13 chr10 101053282 101053582 -44535706 + AluSx SINE Alu 1 296 -16 2284 105 0 7 chr10 101053582 101053878 -44535410 + AluSx SINE Alu 1 294 -18 1587 147 13 70 chr10 101054041 101054340 -44534948 - AluJb SINE Alu -27 285 4 824 181 15 0 chr10 101054350 101054483 -44534805 - AluJo SINE Alu -176 136 2 2267 86 14 0 chr10 101054626 101054917 -44534371 - AluSp SINE Alu -18 295 1 1760 143 4 4 chr10 101054934 101055199 -44534089 - AluSx SINE Alu -20 292 28 2112 84 16 52 chr10 101055372 101055681 -44533607 + AluSp SINE Alu 1 298 -15 2049 126 14 0 chr10 101055692 101055977 -44533311 + AluSx SINE Alu 1 289 -23 1152 167 18 54 chr10 101056891 101057113 -44532175 - AluJo SINE Alu -15 297 84 1302 128 201 13 chr10 101057161 101057395 -44531893 + AluSg1 SINE Alu 1 278 -31 187 29 0 59 chr10 101057404 101057438 -44531850 + (TAAA)n Simple_repeat Simple_repeat 4 35 0 354 211 67 11 chr10 101057668 101057758 -44531530 - AluSp/q SINE Alu -21 282 188 316 220 0 0 chr10 101057772 101057831 -44531457 + MIR SINE MIR 77 135 -127 644 290 151 23 chr10 101057908 101058377 -44530911 + L1ME3A LINE L1 5478 5993 -169 304 354 0 23 chr10 101058983 101059113 -44530175 + MIR SINE MIR 20 146 -62 669 241 17 57 chr10 101059137 101059304 -44529984 + MIR SINE MIR 33 193 -69 2131 109 3 3 chr10 101059304 101059598 -44529690 + AluSx SINE Alu 2 295 -17 669 241 17 57 chr10 101059598 101059650 -44529638 + MIR SINE MIR 193 246 -16 1710 201 55 70 chr10 101060414 101061031 -44528257 + L1MC5 LINE L1 6923 7530 -431 703 195 9 0 chr10 101061054 101061167 -44528121 + FLAM_C SINE Alu 11 124 -19 189 0 0 0 chr10 101061171 101061192 -44528096 + (TAA)n Simple_repeat Simple_repeat 2 22 0 869 213 164 26 chr10 101061193 101061540 -44527748 + L1MC5 LINE L1 7519 7913 -48 507 272 119 25 chr10 101062135 101062337 -44526951 + MIR SINE MIR 2 222 -40 1600 179 0 0 chr10 101062624 101062886 -44526402 + AluSx SINE Alu 46 307 -5 1666 161 37 27 chr10 101062904 101063202 -44526086 + AluSx SINE Alu 2 302 -10 1083 137 25 0 chr10 101063631 101063792 -44525496 + AluSg/x SINE Alu 122 286 -23 544 85 68 9 chr10 101063794 101064019 -44525269 + (TTATA)n Simple_repeat Simple_repeat 1 238 0 36 0 0 0 chr10 101064019 101064055 -44525233 + AT_rich Low_complexity Low_complexity 1 36 0 4078 141 29 100 chr10 101064055 101064121 -44525167 + L1 LINE L1 3781 3850 -2296 1950 128 29 0 chr10 101064121 101064414 -44524874 + AluSx SINE Alu 1 301 0 4078 141 29 100 chr10 101064414 101064459 -44524829 + L1 LINE L1 3850 3897 -2249 2102 113 34 0 chr10 101064459 101064751 -44524537 + AluSx SINE Alu 1 302 -10 4078 141 29 100 chr10 101064751 101065355 -44523933 + L1 LINE L1 3897 4416 -1730 2082 119 14 0 chr10 101065355 101065648 -44523640 + AluSx SINE Alu 1 297 -15 4078 141 29 100 chr10 101065648 101065878 -44523410 + L1 LINE L1 4416 4661 -1485 1959 170 0 0 chr10 101066044 101066350 -44522938 + AluJo SINE Alu 1 306 -6 716 212 0 0 chr10 101066351 101066464 -44522824 - FLAM_A SINE Alu -29 113 1 930 292 106 36 chr10 101066687 101067215 -44522073 - L1M4 LINE L1 -1241 4905 4304 1799 131 0 4 chr10 101067215 101067467 -44521821 + AluSc SINE Alu 1 251 -58 930 292 106 36 chr10 101067467 101067712 -44521576 - L1M4 LINE L1 -1842 4304 4078 507 290 24 48 chr10 101067870 101068118 -44521170 - MER112 DNA MER1_type -17 243 2 2170 106 0 0 chr10 101068275 101068550 -44520738 + AluSx SINE Alu 1 275 -37 238 0 81 0 chr10 101068554 101068591 -44520697 + A-rich Low_complexity Low_complexity 1 40 0 865 154 8 0 chr10 101069074 101069204 -44520084 + FLAM_C SINE Alu 1 131 -2 317 272 11 11 chr10 101069328 101069420 -44519868 + MARNA DNA Mariner 403 494 -92 2094 113 0 0 chr10 101069425 101069740 -44519548 + AluSq SINE Alu 2 316 0 1664 170 39 3 chr10 101069785 101070067 -44519221 - AluJo SINE Alu -20 292 1 203 306 102 10 chr10 101070743 101070841 -44518447 + L2 LINE L2 3139 3245 -27 185 139 23 0 chr10 101071121 101071164 -44518124 + (TA)n Simple_repeat Simple_repeat 1 44 0 195 129 0 0 chr10 101071748 101071779 -44517509 + (A)n Simple_repeat Simple_repeat 1 31 0 2283 104 3 0 chr10 101073222 101073519 -44515769 + AluSq SINE Alu 1 298 -15 23 0 0 0 chr10 101073988 101074011 -44515277 + AT_rich Low_complexity Low_complexity 1 23 0 412 275 37 9 chr10 101074412 101074521 -44514767 + MIR SINE MIR 21 132 -76 2386 65 0 0 chr10 101074570 101074882 -44514406 - AluY SINE Alu 0 311 2 2126 136 0 0 chr10 101075234 101075536 -44513752 + AluSx SINE Alu 1 302 -10 2257 118 0 0 chr10 101075581 101075886 -44513402 + AluSq SINE Alu 1 305 -8 2455 78 3 0 chr10 101075897 101076205 -44513083 + AluSp SINE Alu 1 309 -4 2420 82 3 0 chr10 101076238 101076541 -44512747 + AluSc SINE Alu 1 304 -5 1656 167 0 44 chr10 101077332 101077650 -44511638 - AluJb SINE Alu -4 308 5 2281 105 0 0 chr10 101078964 101079258 -44510030 + AluSc SINE Alu 1 294 -15 2287 105 0 10 chr10 101079440 101079744 -44509544 + AluSx SINE Alu 1 301 -11 224 235 0 0 chr10 101081200 101081251 -44508037 - L3 LINE CR1 -2 1575 1525 399 271 195 0 chr10 101081253 101081371 -44507917 + MER5A DNA MER1_type 16 156 -33 338 263 110 34 chr10 101081377 101081495 -44507793 - MIR SINE MIR -58 150 24 191 411 57 7 chr10 101081508 101081649 -44507639 - L2 LINE L2 -7 3265 3118 1564 179 53 3 chr10 101081650 101081935 -44507353 - AluJb SINE Alu -13 299 1 826 120 16 16 chr10 101081945 101082070 -44507218 - AluJb SINE Alu -187 125 1 2450 84 0 0 chr10 101083431 101083730 -44505558 + AluSx SINE Alu 1 299 -13 260 170 75 0 chr10 101083948 101084001 -44505287 - MIR SINE MIR -95 113 57 636 219 72 90 chr10 101084445 101084846 -44504442 + L1ME3A LINE L1 3860 4253 -1893 1637 238 148 28 chr10 101085227 101085833 -44503455 + L1ME3A LINE L1 5438 6116 -54 21 36 0 0 chr10 101086410 101086438 -44502850 + AT_rich Low_complexity Low_complexity 1 28 0 1752 146 32 39 chr10 101086555 101086864 -44502424 - AluJb SINE Alu -5 307 1 567 153 36 43 chr10 101086957 101087146 -44502142 - MER46A DNA MER2_type -5 231 1 533 212 88 0 chr10 101087404 101087517 -44501771 - FLAM_A SINE Alu -7 126 4 2390 93 3 0 chr10 101087558 101087869 -44501419 + AluSp SINE Alu 1 312 -1 930 187 35 91 chr10 101088288 101088473 -44500815 + MER20 DNA MER1_type 2 173 -46 2013 120 4 0 chr10 101088473 101088749 -44500539 + AluSx SINE Alu 18 294 -18 930 187 35 91 chr10 101088749 101088793 -44500495 + MER20 DNA MER1_type 173 218 -1 216 0 0 0 chr10 101088938 101088962 -44500326 + (CAAT)n Simple_repeat Simple_repeat 4 27 0 369 228 98 41 chr10 101088989 101089112 -44500176 - L2 LINE L2 -1668 1646 1517 25 51 0 0 chr10 101089176 101089215 -44500073 + AT_rich Low_complexity Low_complexity 1 39 0 366 317 56 31 chr10 101089215 101089376 -44499912 - MIR SINE MIR -85 177 13 1730 116 4 0 chr10 101089394 101089627 -44499661 + AluSp SINE Alu 28 261 -52 210 71 0 0 chr10 101089639 101089667 -44499621 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 4720 201 75 60 chr10 101089673 101089971 -44499317 + L1MB3 LINE L1 5146 5438 -745 1477 71 0 0 chr10 101089971 101090155 -44499133 + AluY SINE Alu 122 305 -6 1643 97 0 18 chr10 101090155 101090382 -44498906 + AluSc SINE Alu 85 308 -1 4720 201 75 60 chr10 101090382 101090768 -44498520 + L1MB3 LINE L1 5438 5817 -366 2340 108 0 0 chr10 101090768 101091075 -44498213 + AluSc SINE Alu 1 307 -2 4720 201 75 60 chr10 101091075 101091335 -44497953 + L1MB3 LINE L1 5817 6072 -111 815 191 8 0 chr10 101091335 101091466 -44497822 + FLAM_C SINE Alu 2 133 -10 4720 201 75 60 chr10 101091466 101092060 -44497228 + L1MB3 LINE L1 6072 5888 -295 2224 117 3 0 chr10 101092060 101092359 -44496929 + AluSx SINE Alu 4 303 -9 4720 201 75 60 chr10 101092359 101092620 -44496668 + L1MB3 LINE L1 5887 6143 -40 849 175 42 0 chr10 101092610 101092622 -44496666 + L1MB8 LINE L1 3562 3572 -2574 * 2299 117 0 0 chr10 101092622 101092922 -44496366 + AluSx SINE Alu 1 300 -12 849 175 42 0 chr10 101092922 101093075 -44496213 + L1MB8 LINE L1 3572 3734 -2412 * 4127 130 25 122 chr10 101093060 101093763 -44495525 + L1 LINE L1 3223 3993 -2153 1480 200 36 7 chr10 101093763 101094043 -44495245 + AluJo SINE Alu 12 299 -13 2224 112 3 26 chr10 101094046 101094358 -44494930 + AluSp SINE Alu 1 305 -8 4127 130 25 122 chr10 101094358 101094641 -44494647 + L1 LINE L1 3995 4117 -2029 232 205 274 17 chr10 101094637 101094697 -44494591 + L1MC4 LINE L1 7759 7802 -240 * 2175 119 7 0 chr10 101094697 101095000 -44494288 + AluSp SINE Alu 1 305 -8 232 205 274 17 chr10 101095000 101095056 -44494232 + L1MC4 LINE L1 7802 7905 -137 4567 157 95 67 chr10 101095121 101095372 -44493916 + L1MB8 LINE L1 3943 4185 -1993 2853 25 0 0 chr10 101095372 101095690 -44493598 + AluYb8 SINE Alu 1 318 0 4567 157 95 67 chr10 101095690 101095825 -44493463 + L1MB8 LINE L1 4185 4315 -1863 2181 107 3 13 chr10 101095825 101095957 -44493331 + AluSx SINE Alu 5 137 -175 2425 67 7 0 chr10 101095957 101096255 -44493033 + AluSq SINE Alu 1 300 -13 2181 107 3 13 chr10 101096255 101096421 -44492867 + AluSx SINE Alu 137 300 -12 4567 157 95 67 chr10 101096421 101096735 -44492553 + L1MB8 LINE L1 4315 4619 -1559 2134 92 21 0 chr10 101096735 101097018 -44492270 + AluY SINE Alu 1 289 -22 4567 157 95 67 chr10 101097018 101097111 -44492177 + L1MB8 LINE L1 4619 4708 -1470 1767 133 57 0 chr10 101097111 101097374 -44491914 + AluSx SINE Alu 24 301 -11 4567 157 95 67 chr10 101097374 101097542 -44491746 + L1MB8 LINE L1 4708 4870 -1308 2268 99 0 3 chr10 101097542 101097834 -44491454 - AluSq SINE Alu -22 291 1 4567 157 95 67 chr10 101097834 101098070 -44491218 + L1MB8 LINE L1 4870 5098 -1080 2165 115 0 7 chr10 101098070 101098375 -44490913 - AluSx SINE Alu -9 303 1 4567 157 95 67 chr10 101098375 101099218 -44490070 + L1MB8 LINE L1 5098 6120 -58 1608 168 12 0 chr10 101099218 101099474 -44489814 - AluJb SINE Alu -10 302 44 2179 112 0 0 chr10 101099981 101100276 -44489012 + AluSx SINE Alu 1 295 -17 2211 81 3 14 chr10 101100451 101100736 -44488552 + AluSq SINE Alu 1 282 -31 231 88 0 0 chr10 101100739 101100773 -44488515 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 2315 70 0 35 chr10 101100950 101101262 -44488026 + AluY SINE Alu 1 301 -10 913 91 0 0 chr10 101102338 101102448 -44486840 + AluSx SINE Alu 1 110 -202 2295 88 0 0 chr10 101102449 101102732 -44486556 + AluSq SINE Alu 1 283 -30 1452 132 0 5 chr10 101102746 101102951 -44486337 + AluSx SINE Alu 98 301 -11 2241 112 3 16 chr10 101102951 101103264 -44486024 + AluSc SINE Alu 1 309 0 579 291 106 28 chr10 101103574 101103856 -44485432 + HAL1 LINE L1 1650 1953 -554 2155 106 13 13 chr10 101103870 101104182 -44485106 + AluSx SINE Alu 1 312 0 676 210 8 0 chr10 101104260 101104384 -44484904 + FLAM_A SINE Alu 4 128 -5 2289 98 13 7 chr10 101104444 101104750 -44484538 + AluSx SINE Alu 1 308 -4 1095 136 53 0 chr10 101104750 101104919 -44484369 + AluSg/x SINE Alu 134 311 -1 236 333 32 0 chr10 101105170 101105263 -44484025 + L2 LINE L2 2249 2344 -970 384 311 34 45 chr10 101105377 101105554 -44483734 + MIR SINE MIR 29 203 -59 1340 142 3 123 chr10 101105554 101105864 -44483424 + AluJb SINE Alu 1 273 -39 246 32 0 0 chr10 101105864 101105895 -44483393 + (TC)n Simple_repeat Simple_repeat 1 31 0 234 0 0 0 chr10 101105894 101105920 -44483368 + (CA)n Simple_repeat Simple_repeat 1 26 0 * 2298 81 58 0 chr10 101105937 101106281 -44483007 + L1MA2 LINE L1 5841 6204 -100 1789 164 17 0 chr10 101107174 101107461 -44481827 + AluJo SINE Alu 3 294 -18 215 259 212 0 chr10 101107560 101107645 -44481643 - L2 LINE L2 -335 2978 2876 353 267 0 0 chr10 101107650 101107740 -44481548 - L2 LINE L2 -1010 2304 2215 2272 93 3 0 chr10 101108014 101108330 -44480958 + AluSq SINE Alu 1 317 0 235 224 0 0 chr10 101109204 101109253 -44480035 - L2 LINE L2 0 3313 3265 2228 107 10 0 chr10 101109310 101109600 -44479688 + AluSx SINE Alu 3 295 -17 1872 141 20 17 chr10 101110119 101110416 -44478872 + AluJo SINE Alu 1 298 -14 814 85 9 0 chr10 101110468 101110574 -44478714 - AluSg/x SINE Alu -18 292 186 1680 81 0 14 chr10 101110574 101110796 -44478492 - AluSq SINE Alu -94 219 1 289 250 12 12 chr10 101111246 101111326 -44477962 + MIR SINE MIR 10 89 -173 330 333 36 12 chr10 101112665 101112830 -44476458 + MIR3 SINE MIR 16 184 -24 26 0 0 0 chr10 101113976 101114002 -44475286 + GC_rich Low_complexity Low_complexity 1 26 0 527 173 75 8 chr10 101114802 101114935 -44474353 - MER69 DNA AcHobo -2 2524 2383 2368 81 0 7 chr10 101115024 101115320 -44473968 + AluSg SINE Alu 1 294 -16 474 132 92 0 chr10 101115354 101115430 -44473858 - MER69 DNA AcHobo -2443 83 1 459 288 127 14 chr10 101115518 101115730 -44473558 - MIR SINE MIR -6 256 21 503 258 6 54 chr10 101115737 101115904 -44473384 - L2 LINE L2 -2 3311 3153 2383 84 7 3 chr10 101116057 101116365 -44472923 - AluSc SINE Alu 0 309 1 1949 116 4 0 chr10 101116691 101116958 -44472330 - AluSp SINE Alu -14 299 32 2101 59 4 4 chr10 101117058 101117312 -44471976 + AluSx SINE Alu 29 282 -30 270 0 0 0 chr10 101117313 101117343 -44471945 + (CA)n Simple_repeat Simple_repeat 1 30 0 311 278 105 0 chr10 101117447 101117580 -44471708 - MIR SINE MIR -20 242 96 274 157 0 0 chr10 101118896 101118947 -44470341 + L1MC3 LINE L1 7729 7779 -6 227 229 29 14 chr10 101119276 101119346 -44469942 - L1MC4 LINE L1 -11 8031 7961 633 176 60 142 chr10 101119651 101119748 -44469540 - MER58C DNA MER1_type -2205 215 112 2147 117 14 0 chr10 101119748 101120030 -44469258 - AluSx SINE Alu -22 290 5 633 176 60 142 chr10 101120030 101120165 -44469123 - MER58C DNA MER1_type -2308 112 2 4922 133 54 24 chr10 101120246 101120669 -44468619 - L1MB3 LINE L1 -17 6166 5757 2261 94 0 7 chr10 101120669 101120977 -44468311 - AluY SINE Alu -5 306 1 4922 133 54 24 chr10 101120977 101121517 -44467771 - L1MB3 LINE L1 -426 5757 5175 1874 151 0 4 chr10 101121954 101122226 -44467062 - AluSx SINE Alu -28 284 14 2122 111 10 10 chr10 101122296 101122621 -44466667 - AluSq SINE Alu 0 313 3 527 270 0 0 chr10 101122625 101122740 -44466548 - FLAM_A SINE Alu -7 135 21 4263 186 13 93 chr10 101122740 101123445 -44465843 - L1MB3 LINE L1 -959 5187 4427 2342 114 0 0 chr10 101123445 101123752 -44465536 - AluSq SINE Alu -6 307 1 4263 186 13 93 chr10 101123752 101123909 -44465379 - L1MB3 LINE L1 -1719 4427 4259 2207 111 3 35 chr10 101123909 101124225 -44465063 + AluSg SINE Alu 1 306 -4 4263 186 13 93 chr10 101124225 101124323 -44464965 - L1MB3 LINE L1 -1887 4259 4155 2531 73 0 0 chr10 101124323 101124625 -44464663 - AluSc SINE Alu -7 302 1 4263 186 13 93 chr10 101124625 101124659 -44464629 - L1MB3 LINE L1 -1991 4155 4120 180 0 0 0 chr10 101124659 101124679 -44464609 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2281 98 3 0 chr10 101124681 101124977 -44464311 - AluSg SINE Alu -13 297 1 4263 186 13 93 chr10 101124977 101124989 -44464299 - L1MB3 LINE L1 -2027 4119 4108 1081 125 30 0 chr10 101124989 101125157 -44464131 - L1PA11 LINE L1 -2 6172 6000 4263 186 13 93 chr10 101125157 101125171 -44464117 - L1MB3 LINE L1 -2038 4108 4094 2055 122 33 3 chr10 101125171 101125474 -44463814 - AluSx SINE Alu 0 312 1 4263 186 13 93 chr10 101125474 101125523 -44463765 - L1MB3 LINE L1 -2052 4094 4043 2272 117 0 0 chr10 101125523 101125832 -44463456 - AluSg1 SINE Alu 0 309 1 4263 186 13 93 chr10 101125832 101125863 -44463425 - L1MB3 LINE L1 -2103 4043 4180 2174 116 0 31 chr10 101125863 101126183 -44463105 - AluSg SINE Alu 0 310 1 4263 186 13 93 chr10 101126183 101126289 -44462999 - L1MB3 LINE L1 -1965 4181 4068 932 189 15 58 chr10 101126309 101126515 -44462773 - AluJo SINE Alu -115 197 1 3021 215 30 11 chr10 101126516 101127242 -44462046 - L1MB3 LINE L1 -2066 4080 3341 968 201 23 0 chr10 101127264 101127483 -44461805 - L1MB3 LINE L1 -3046 3100 2877 279 0 0 0 chr10 101127500 101127531 -44461757 + (TG)n Simple_repeat Simple_repeat 1 31 0 1359 60 6 0 chr10 101127532 101127699 -44461589 - AluSq SINE Alu -15 298 131 514 245 69 27 chr10 101127729 101127917 -44461371 + L2 LINE L2 2919 3114 -199 989 152 152 5 chr10 101127928 101128126 -44461162 - AluJo SINE Alu -1 311 85 400 123 7 11 chr10 101128126 101128258 -44461030 - AluSg/x SINE Alu -62 247 67 1261 186 0 5 chr10 101128258 101128462 -44460826 - AluSx SINE Alu -109 203 1 455 229 56 108 chr10 101128463 101128677 -44460611 + L2 LINE L2 3111 3313 0 241 260 82 0 chr10 101129574 101129647 -44459641 - L2 LINE L2 -9 3263 3185 550 191 59 33 chr10 101129900 101130052 -44459236 + MIR SINE MIR 107 262 0 2603 59 3 0 chr10 101130157 101130460 -44458828 - AluSp SINE Alu -9 304 1 743 176 0 37 chr10 101130538 101130674 -44458614 + FLAM_C SINE Alu 1 131 -2 23 0 0 0 chr10 101131264 101131287 -44458001 + AT_rich Low_complexity Low_complexity 1 23 0 2355 94 3 0 chr10 101131442 101131751 -44457537 - AluSq SINE Alu -3 310 1 1431 101 0 0 chr10 101132547 101132726 -44456562 + AluSx SINE Alu 1 179 -133 206 228 0 0 chr10 101132741 101132798 -44456490 + A-rich Low_complexity Low_complexity 1 57 0 679 203 0 36 chr10 101132812 101132950 -44456338 - FLAM_A SINE Alu 0 133 1 2330 90 0 3 chr10 101133121 101133411 -44455877 - AluSc SINE Alu -20 289 1 342 0 0 0 chr10 101133941 101133979 -44455309 + (GA)n Simple_repeat Simple_repeat 2 39 0 * 360 0 0 0 chr10 101133978 101134018 -44455270 + (TG)n Simple_repeat Simple_repeat 2 41 0 2343 97 0 0 chr10 101134413 101134711 -44454577 - AluSq SINE Alu -15 298 1 184 373 24 16 chr10 101135249 101135375 -44453913 + MIR SINE MIR 16 142 -66 2253 72 18 0 chr10 101135880 101136179 -44453109 - AluY SINE Alu 0 306 3 34 0 0 0 chr10 101136250 101136284 -44453004 + AT_rich Low_complexity Low_complexity 1 34 0 1987 123 41 7 chr10 101136291 101136583 -44452705 + AluSx SINE Alu 1 302 -10 233 75 25 0 chr10 101136774 101136814 -44452474 + (TTTG)n Simple_repeat Simple_repeat 4 44 0 1940 156 0 7 chr10 101136816 101137111 -44452177 - AluJb SINE Alu -19 293 1 26 0 0 0 chr10 101138023 101138049 -44451239 + AT_rich Low_complexity Low_complexity 1 26 0 1674 167 29 36 chr10 101138379 101138685 -44450603 + AluJb SINE Alu 5 308 -4 405 0 0 0 chr10 101138695 101138740 -44450548 + (CA)n Simple_repeat Simple_repeat 2 46 0 2106 106 3 0 chr10 101138775 101139059 -44450229 - AluSq SINE Alu -17 296 12 1435 186 49 33 chr10 101139444 101139627 -44449661 - AluJo SINE Alu -1 311 120 180 0 0 0 chr10 101139627 101139647 -44449641 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1435 186 49 33 chr10 101139647 101139769 -44449519 - AluJo SINE Alu -192 120 1 838 118 0 17 chr10 101139795 101139914 -44449374 + AluJb SINE Alu 1 117 -195 1292 227 3 0 chr10 101140014 101140318 -44448970 - L1P LINE L1 -1625 4521 4217 1789 139 60 7 chr10 101140324 101140605 -44448683 + AluSx SINE Alu 1 296 -16 1925 175 58 32 chr10 101140635 101141020 -44448268 - L1MB7 LINE L1 -3 6181 5781 2279 109 3 0 chr10 101141020 101141322 -44447966 - AluSg SINE Alu -7 303 1 1925 175 58 32 chr10 101141322 101141383 -44447905 - L1MB7 LINE L1 -403 5781 5723 1634 168 45 7 chr10 101141383 101141674 -44447614 - AluJo SINE Alu 0 312 11 2826 190 131 22 chr10 101142266 101142913 -44446375 - L1MB8 LINE L1 0 6178 5394 2299 123 0 0 chr10 101142913 101143223 -44446065 - AluSg SINE Alu 0 310 1 2826 190 131 22 chr10 101143223 101143499 -44445789 - L1MB8 LINE L1 -784 5394 5150 1552 201 146 14 chr10 101143471 101143548 -44445740 - L1MD2 LINE L1 0 6359 6293 * 2246 116 7 3 chr10 101143548 101143851 -44445437 + AluSx SINE Alu 1 304 -8 1552 201 146 14 chr10 101143851 101144191 -44445097 - L1MD2 LINE L1 -66 6293 5887 2130 103 0 7 chr10 101144193 101144501 -44444787 - AluSg SINE Alu 0 307 2 2222 163 39 32 chr10 101144501 101144967 -44444321 - L1MD2 LINE L1 -531 5828 5360 210 150 33 17 chr10 101144968 101145028 -44444260 + (TA)n Simple_repeat Simple_repeat 2 62 0 589 200 149 42 chr10 101145028 101145243 -44444045 - L1MC5 LINE L1 -475 7486 7249 2620 68 0 0 chr10 101145255 101145565 -44443723 - AluY SINE Alu -1 310 1 1196 198 79 72 chr10 101145566 101145759 -44443529 - L1MC5 LINE L1 -880 7081 6891 2340 125 19 30 chr10 101145759 101146127 -44443161 - THE1B LTR MaLR 0 364 1 1196 198 79 72 chr10 101146127 101146362 -44442926 - L1MC5 LINE L1 -1070 6891 6650 1404 146 0 5 chr10 101146796 101147002 -44442286 - AluJb SINE Alu -21 291 87 897 239 30 107 chr10 101147041 101147178 -44442110 - L1MD2 LINE L1 -2 6357 6211 2048 133 7 3 chr10 101147178 101147478 -44441810 + AluSp SINE Alu 1 301 -12 897 239 30 107 chr10 101147478 101147518 -44441770 - L1MD2 LINE L1 -148 6211 6170 2449 86 0 0 chr10 101147518 101147821 -44441467 + AluSq SINE Alu 1 303 -10 897 239 30 107 chr10 101147821 101147892 -44441396 - L1MD2 LINE L1 -189 6170 6095 2045 164 128 13 chr10 101147892 101148276 -44441012 - MSTA LTR MaLR 0 428 1 897 239 30 107 chr10 101148276 101148455 -44440833 - L1MD2 LINE L1 -264 6095 5961 5404 122 15 34 chr10 101149069 101149411 -44439877 - L1PA15 LINE L1 0 6165 5818 1940 147 6 26 chr10 101149411 101149724 -44439564 - AluSx SINE Alu -5 307 1 5404 122 15 34 chr10 101149724 101149958 -44439330 - L1PA15 LINE L1 -347 5818 5581 2224 112 3 0 chr10 101149958 101150254 -44439034 - AluSx SINE Alu -15 297 1 5404 122 15 34 chr10 101150254 101150536 -44438752 - L1PA15 LINE L1 -584 5581 5322 2275 91 10 7 chr10 101150536 101150834 -44438454 - AluSq SINE Alu -14 299 1 4144 187 26 2 chr10 101150840 101151659 -44437629 + L1P LINE L1 4217 5054 -1092 2379 77 3 13 chr10 101151936 101152247 -44437041 - AluY SINE Alu 0 311 1 374 269 114 91 chr10 101152562 101152826 -44436462 - HAL1 LINE L1 -1351 1156 887 291 295 95 75 chr10 101152863 101153168 -44436120 - HAL1 LINE L1 -1704 803 493 561 199 338 0 chr10 101153254 101153405 -44435883 + MER20 DNA MER1_type 18 219 0 280 312 64 16 chr10 101153482 101153607 -44435681 - HAL1 LINE L1 -2127 380 250 2305 92 0 10 chr10 101154173 101154467 -44434821 - AluSg SINE Alu -19 291 1 1792 147 10 22 chr10 101154789 101155102 -44434186 - AluJo SINE Alu -3 309 1 2413 75 7 3 chr10 101155771 101156076 -44433212 + AluSp SINE Alu 1 306 -7 2116 112 0 31 chr10 101156191 101156485 -44432803 + AluSx SINE Alu 3 287 -25 2873 7 0 0 chr10 101156650 101156956 -44432332 - AluYb8 SINE Alu -12 306 1 2208 110 3 0 chr10 101156978 101157270 -44432018 - AluSx SINE Alu -19 293 1 1606 99 0 9 chr10 101157468 101157679 -44431609 - AluSg/x SINE Alu -19 291 83 21 0 0 0 chr10 101158512 101158533 -44430755 + AT_rich Low_complexity Low_complexity 1 21 0 2354 58 14 0 chr10 101159269 101159578 -44429710 - AluY SINE Alu 0 313 1 1718 117 0 17 chr10 101159630 101159869 -44429419 - AluSx SINE Alu -77 235 1 818 128 17 0 chr10 101160634 101160748 -44428540 - Tigger1 DNA MER2_type -1 2417 2302 264 135 0 0 chr10 101160748 101160785 -44428503 + Alu SINE Alu 1 37 -265 1629 189 75 0 chr10 101160791 101161098 -44428190 - Tigger1 DNA MER2_type -2088 330 1 2175 103 34 0 chr10 101161639 101161931 -44427357 + AluSq SINE Alu 1 302 -11 29 47 0 0 chr10 101161962 101162005 -44427283 + AT_rich Low_complexity Low_complexity 1 43 0 2435 88 0 0 chr10 101162046 101162352 -44426936 + AluSx SINE Alu 1 306 -6 194 209 47 101 chr10 101163464 101163612 -44425676 - MIR SINE MIR -14 248 109 1845 142 13 30 chr10 101164601 101164904 -44424384 + AluJo SINE Alu 1 298 -14 253 93 23 0 chr10 101165215 101165258 -44424030 + L1MC4 LINE L1 7999 8042 0 222 219 0 0 chr10 101165321 101165362 -44423926 + (TATATG)n Simple_repeat Simple_repeat 6 46 0 634 196 54 7 chr10 101165367 101165515 -44423773 - L1MC4a LINE L1 -1283 6525 6371 728 212 166 5 chr10 101165515 101165708 -44423580 + MER58A DNA MER1_type 1 224 0 2497 68 3 0 chr10 101165716 101166025 -44423263 - AluY SINE Alu -1 310 1 1878 113 0 53 chr10 101166059 101166343 -44422945 - AluSx SINE Alu -43 269 1 316 242 40 16 chr10 101166418 101166542 -44422746 - L1M4 LINE L1 -1092 5054 4928 3300 191 65 24 chr10 101166643 101167696 -44421592 - L1MDb LINE L1 -4550 1856 757 1984 252 28 0 chr10 101167696 101168196 -44421092 - L1MEc LINE L1 -3448 2767 2254 2196 132 0 0 chr10 101168202 101168506 -44420782 - AluSx SINE Alu -8 304 1 238 235 66 140 chr10 101168521 101168793 -44420495 - L1MEc LINE L1 -4249 2147 1896 367 193 73 37 chr10 101168794 101168850 -44420438 + Charlie5 DNA MER1_type 2512 2564 -60 1987 87 4 4 chr10 101168850 101169103 -44420185 - AluSg SINE Alu -11 299 47 367 193 73 37 chr10 101169103 101169155 -44420133 + Charlie5 DNA MER1_type 2564 2624 0 2113 130 0 10 chr10 101169606 101169913 -44419375 - AluSx SINE Alu -8 304 1 426 219 105 0 chr10 101170711 101170816 -44418472 + MIR SINE MIR 19 134 -128 2458 80 0 7 chr10 101171431 101171732 -44417556 - AluSg SINE Alu -11 299 1 1644 214 74 116 chr10 101171965 101172803 -44416485 + L1MC5 LINE L1 6719 7521 -440 613 221 8 0 chr10 101172811 101172933 -44416355 - MER94 DNA DNA -8 126 4 923 207 126 51 chr10 101172933 101173305 -44415983 + L1MC5 LINE L1 7513 7912 -49 1907 146 31 0 chr10 101173315 101173603 -44415685 + AluJb SINE Alu 1 297 -15 538 168 44 0 chr10 101174496 101174609 -44414679 + L1MB7 LINE L1 6062 6179 -5 715 130 10 0 chr10 101174844 101174944 -44414344 + AluJ/FLAM SINE Alu 2 102 -210 503 239 151 19 chr10 101174967 101175172 -44414116 - MARNA DNA Mariner -45 541 310 21 0 0 0 chr10 101175246 101175267 -44414021 + AT_rich Low_complexity Low_complexity 1 21 0 2043 108 39 7 chr10 101176566 101176852 -44412436 - AluSx SINE Alu -17 295 1 2101 76 9 101 chr10 101176862 101177190 -44412098 - AluSp SINE Alu -5 298 1 879 142 0 64 chr10 101177493 101177634 -44411654 - FLAM_C SINE Alu 0 133 2 2352 87 3 0 chr10 101177664 101177964 -44411324 - AluSp SINE Alu -12 301 1 21 36 0 0 chr10 101178571 101178599 -44410689 + AT_rich Low_complexity Low_complexity 1 28 0 855 210 36 62 chr10 101178696 101178920 -44410368 - MER20 DNA MER1_type 0 219 2 1956 120 31 10 chr10 101179426 101179718 -44409570 + AluSx SINE Alu 1 298 -14 3206 250 124 50 chr10 101181297 101181584 -44407704 + L1MDa LINE L1 2 266 -6276 1986 121 38 0 chr10 101181584 101181873 -44407415 - AluSx SINE Alu -12 300 1 3206 250 124 50 chr10 101181873 101182492 -44406796 + L1MDa LINE L1 266 838 -5704 1774 158 10 31 chr10 101182492 101182784 -44406504 + AluJo SINE Alu 1 286 -26 3206 250 124 50 chr10 101182784 101183467 -44405821 + L1MDa LINE L1 838 1710 -4832 3202 158 52 24 chr10 101183504 101183621 -44405667 + L1MB5 LINE L1 5410 5522 -652 1880 145 0 52 chr10 101183621 101183931 -44405357 - AluSx SINE Alu -18 294 1 3202 158 52 24 chr10 101183931 101184452 -44404836 + L1MB5 LINE L1 5522 6066 -108 1867 112 4 0 chr10 101184452 101184702 -44404586 + AluSx SINE Alu 21 271 -41 727 288 7 7 chr10 101184838 101185109 -44404179 + L1M4 LINE L1 3251 3521 -3123 209 254 18 0 chr10 101185111 101185166 -44404122 + (TA)n Simple_repeat Simple_repeat 1 56 0 1028 152 35 51 chr10 101185166 101185230 -44404058 - AluJo SINE Alu -109 203 140 1483 203 3 10 chr10 101185230 101185526 -44403762 - AluJb SINE Alu -18 294 1 1028 152 35 51 chr10 101185526 101185658 -44403630 - AluJo SINE Alu -172 140 10 235 177 65 0 chr10 101185661 101185723 -44403565 - L1MEc LINE L1 -3216 2999 2934 305 108 31 62 chr10 101185723 101185788 -44403500 + U2 snRNA snRNA 1 63 -125 1872 236 108 10 chr10 101185951 101186781 -44402507 - L1MEc LINE L1 -3359 2856 1978 2315 94 7 0 chr10 101186781 101187080 -44402208 + AluSp SINE Alu 1 301 -12 242 147 0 0 chr10 101187080 101187114 -44402174 - Alu SINE Alu -26 274 241 1824 145 28 0 chr10 101187243 101187526 -44401762 - AluSx SINE Alu -21 291 1 1226 224 41 50 chr10 101187526 101187865 -44401423 - MLT1A2 LTR MaLR -38 336 1 290 301 68 27 chr10 101187865 101187969 -44401319 + L1MDa LINE L1 1741 1839 -4805 1577 167 0 4 chr10 101187969 101188221 -44401067 + AluJo SINE Alu 46 296 -16 290 301 68 27 chr10 101188221 101188335 -44400953 + L1MDa LINE L1 1839 1968 -4676 2019 238 27 74 chr10 101188335 101188736 -44400552 + L1M4 LINE L1 1 363 -6179 1834 173 7 0 chr10 101188736 101189036 -44400252 + AluJo SINE Alu 1 302 -10 2019 238 27 74 chr10 101189036 101189268 -44400020 + L1M4 LINE L1 363 604 -5938 1092 95 0 0 chr10 101189268 101189405 -44399883 + AluSq/x SINE Alu 1 137 -175 2279 101 3 0 chr10 101189406 101189703 -44399585 + AluSq SINE Alu 1 298 -15 3955 209 73 81 chr10 101189709 101190178 -44399110 + L1M4 LINE L1 601 1072 -5572 1989 162 7 0 chr10 101190178 101190481 -44398807 + AluSx SINE Alu 1 305 -7 3955 209 73 81 chr10 101190481 101192198 -44397090 + L1M4 LINE L1 1072 2804 -3840 2203 109 7 0 chr10 101192198 101192491 -44396797 + AluSg SINE Alu 1 295 -15 3955 209 73 81 chr10 101192491 101192854 -44396434 + L1M4 LINE L1 2804 3168 -3476 2331 98 0 0 chr10 101194498 101194803 -44394485 - AluY SINE Alu -6 305 1 32 26 0 0 chr10 101194960 101194999 -44394289 + AT_rich Low_complexity Low_complexity 1 39 0 1035 185 27 27 chr10 101195006 101195266 -44394022 + AluSx SINE Alu 1 260 -52 56 48 0 0 chr10 101195282 101195366 -44393922 + GC_rich Low_complexity Low_complexity 1 84 0 1109 146 6 0 chr10 101195469 101195640 -44393648 + AluSq SINE Alu 126 297 -16 1067 251 52 75 chr10 101195646 101195904 -44393384 - L1MEc LINE L1 -4421 1975 1713 2023 141 13 7 chr10 101195904 101196203 -44393085 - AluJb SINE Alu -11 301 1 1067 251 52 75 chr10 101196203 101196225 -44393063 - L1MEc LINE L1 -4683 1713 1692 2427 102 0 0 chr10 101196225 101196538 -44392750 - AluSp SINE Alu 0 313 1 1067 251 52 75 chr10 101196538 101196817 -44392471 - L1MEc LINE L1 -4704 1692 1428 643 151 0 11 chr10 101196852 101196945 -44392343 - FRAM SINE Alu -17 159 68 1095 221 118 0 chr10 101196983 101197254 -44392034 - MLT-int LTR MaLR -933 802 500 2162 119 0 0 chr10 101197258 101197560 -44391728 + AluSx SINE Alu 1 302 -10 297 299 0 0 chr10 101197609 101197706 -44391582 - MST-int LTR MaLR -1206 445 349 2211 132 0 0 chr10 101197706 101198017 -44391271 - AluSq SINE Alu -2 311 1 1227 224 12 4 chr10 101198017 101198272 -44391016 - MSTD-int LTR MaLR -1477 258 2 1617 188 43 31 chr10 101198274 101198599 -44390689 - MSTD LTR MaLR 0 396 68 6509 62 2 52 chr10 101198619 101200018 -44389270 - SVA Other Other -520 1386 433 234 228 342 0 chr10 101200912 101200991 -44388297 - L2 LINE L2 -5 3308 3203 515 250 221 12 chr10 101201600 101201975 -44387313 + L1MC4 LINE L1 6736 7289 -753 2555 44 0 0 chr10 101202011 101202304 -44386984 + AluY SINE Alu 1 293 -18 299 306 82 7 chr10 101202374 101202521 -44386767 + L1MC4 LINE L1 7761 7918 -124 198 222 0 0 chr10 101202525 101202579 -44386709 + (TA)n Simple_repeat Simple_repeat 1 54 0 14844 117 42 27 chr10 101202584 101202792 -44386496 - Tigger1 DNA MER2_type -12 2406 2203 1268 123 210 12 chr10 101202792 101203035 -44386253 + AluSg1 SINE Alu 1 291 -18 14844 117 42 27 chr10 101203035 101203364 -44385924 - Tigger1 DNA MER2_type -215 2203 1880 646 184 0 37 chr10 101203364 101203500 -44385788 - FLAM_C SINE Alu -1 132 2 14844 117 42 27 chr10 101203500 101205331 -44383957 - Tigger1 DNA MER2_type -538 1880 1 2140 93 3 3 chr10 101205560 101205860 -44383428 - AluY SINE Alu -11 300 1 27 0 0 0 chr10 101206418 101206445 -44382843 + AT_rich Low_complexity Low_complexity 1 27 0 1955 107 50 17 chr10 101207446 101207744 -44381544 - AluSq SINE Alu -5 308 1 4305 164 46 17 chr10 101207865 101208474 -44380814 + L1MB7 LINE L1 5285 5875 -309 1556 90 36 0 chr10 101208474 101208696 -44380592 - MER30 DNA MER1_type 0 230 1 4305 164 46 17 chr10 101208696 101208890 -44380398 + L1MB7 LINE L1 5875 6117 -67 2099 107 3 17 chr10 101208890 101209190 -44380098 - AluSx SINE Alu -16 296 1 4305 164 46 17 chr10 101209190 101209249 -44380039 + L1MB7 LINE L1 6117 6173 -11 2446 60 0 0 chr10 101209259 101209559 -44379729 - AluY SINE Alu -11 300 1 2207 92 0 0 chr10 101209561 101209854 -44379434 - AluSx SINE Alu -19 293 1 2185 95 0 3 chr10 101209855 101210151 -44379137 - AluSx SINE Alu -17 295 1 2222 95 0 0 chr10 101210812 101211106 -44378182 + AluSg SINE Alu 1 294 -16 229 188 45 125 chr10 101211308 101211420 -44377868 + L2 LINE L2 3211 3313 0 3331 135 22 0 chr10 101211449 101211952 -44377336 - L1PA15 LINE L1 -21 6144 5631 517 267 103 36 chr10 101211965 101212012 -44377276 + MIR SINE MIR 49 91 -171 2229 104 0 3 chr10 101212012 101212319 -44376969 - AluSg SINE Alu -4 306 1 517 267 103 36 chr10 101212319 101212466 -44376822 + MIR SINE MIR 91 256 -6 180 217 0 0 chr10 101212473 101212519 -44376769 + (TAA)n Simple_repeat Simple_repeat 1 46 0 195 256 0 0 chr10 101213095 101213138 -44376150 + MIR SINE MIR 72 114 -148 850 131 23 0 chr10 101213338 101213468 -44375820 + AluJb SINE Alu 1 133 -179 478 145 13 0 chr10 101213578 101213654 -44375634 + MSTD LTR MaLR 1 77 -319 2471 88 40 90 chr10 101213704 101214203 -44375085 + SVA Other Other 393 866 -520 22 0 0 0 chr10 101214305 101214327 -44374961 + GC_rich Low_complexity Low_complexity 1 22 0 27 29 0 0 chr10 101214403 101214437 -44374851 + GC_rich Low_complexity Low_complexity 1 34 0 244 313 16 0 chr10 101216435 101216563 -44372725 + (TG)n Simple_repeat Simple_repeat 1 130 0 22 70 0 0 chr10 101219356 101219399 -44369889 + AT_rich Low_complexity Low_complexity 1 43 0 523 277 62 23 chr10 101220452 101220629 -44368659 - MER5A DNA MER1_type -5 184 1 223 243 95 14 chr10 101221325 101221399 -44367889 + MIR3 SINE MIR 113 192 -16 1901 99 4 0 chr10 101222871 101223134 -44366154 + AluSx SINE Alu 34 297 -15 2396 59 13 0 chr10 101223134 101223437 -44365851 + AluY SINE Alu 1 307 -4 180 0 0 0 chr10 101224147 101224167 -44365121 + (A)n Simple_repeat Simple_repeat 1 20 0 1677 112 135 11 chr10 101224787 101225054 -44364234 + AluSx SINE Alu 3 302 0 237 188 21 0 chr10 101225310 101225358 -44363930 - MER46C DNA MER2_type -289 49 1 721 254 175 24 chr10 101225389 101225720 -44363568 + L2 LINE L2 2933 3313 0 501 205 40 80 chr10 101225719 101225870 -44363418 - MIR SINE MIR -15 247 103 * 2328 95 0 0 chr10 101226221 101226525 -44362763 + AluSc SINE Alu 1 304 -5 330 26 0 0 chr10 101226627 101226666 -44362622 + (TA)n Simple_repeat Simple_repeat 1 39 0 247 264 11 92 chr10 101226735 101226822 -44362466 + L2 LINE L2 3233 3312 -1 909 221 44 108 chr10 101227993 101228294 -44360994 - L1ME3A LINE L1 -5 6165 5846 225 0 0 0 chr10 101228294 101228319 -44360969 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2080 100 0 0 chr10 101228321 101228600 -44360688 - AluSx SINE Alu -30 282 4 909 221 44 108 chr10 101228600 101228702 -44360586 - L1ME3A LINE L1 -325 5845 5785 1146 117 0 0 chr10 101228896 101229059 -44360229 - AluY SINE Alu -148 163 1 452 270 118 26 chr10 101229070 101229340 -44359948 + L1ME LINE L1 5385 5679 -442 1431 161 39 46 chr10 101229444 101229724 -44359564 + AluJo SINE Alu 11 288 -24 200 109 0 43 chr10 101229724 101229770 -44359518 + (CATATA)n Simple_repeat Simple_repeat 5 48 0 318 145 97 0 chr10 101230266 101230328 -44358960 + L2 LINE L2 3242 3309 -4 349 299 65 52 chr10 101230649 101230698 -44358590 - MIR3 SINE MIR -4 204 157 2339 80 3 3 chr10 101230698 101231009 -44358279 + AluSx SINE Alu 1 311 -1 349 299 65 52 chr10 101231009 101231113 -44358175 - MIR3 SINE MIR -51 157 49 1001 123 37 25 chr10 101231271 101231434 -44357854 - AluSq SINE Alu -19 294 130 240 35 0 0 chr10 101231441 101231470 -44357818 + (TTG)n Simple_repeat Simple_repeat 2 30 0 256 127 32 63 chr10 101232063 101232126 -44357162 + Alu SINE Alu 242 302 0 1682 168 4 0 chr10 101232127 101232407 -44356881 - AluSx SINE Alu -31 281 1 432 265 36 60 chr10 101232414 101232580 -44356708 + MIR SINE MIR 101 262 0 300 288 0 25 chr10 101232639 101232719 -44356569 + MIR SINE MIR 45 122 -86 208 295 103 13 chr10 101232774 101232852 -44356436 + MIR SINE MIR 121 205 -57 1640 168 10 7 chr10 101232965 101233274 -44356014 - AluJo SINE Alu -2 310 1 2361 87 3 0 chr10 101233345 101233655 -44355633 - AluSx SINE Alu -1 311 1 511 221 26 0 chr10 101234190 101234303 -44354985 + MIR SINE MIR 11 126 -136 452 184 24 88 chr10 101234310 101234435 -44354853 - L1MA9 LINE L1 -36 6276 6160 248 575 0 75 chr10 101234453 101234639 -44354649 - AluYb8 SINE Alu 0 308 137 294 29 0 0 chr10 101234640 101234675 -44354613 + (TC)n Simple_repeat Simple_repeat 2 36 0 264 30 0 0 chr10 101234674 101234707 -44354581 + (TG)n Simple_repeat Simple_repeat 2 34 0 * 905 207 0 0 chr10 101234720 101234899 -44354389 + AluJb SINE Alu 130 308 -4 498 250 16 0 chr10 101234901 101235025 -44354263 - L1MA9 LINE L1 -169 6143 6018 421 285 58 7 chr10 101235030 101235167 -44354121 + MIR SINE MIR 119 262 0 2176 110 7 0 chr10 101235945 101236255 -44353033 - AluSx SINE Alu 0 312 1 499 336 104 0 chr10 101236261 101236472 -44352816 + MIR SINE MIR 28 260 -2 596 281 26 0 chr10 101237001 101237154 -44352134 - MER91A DNA MER1_type -39 157 1 436 294 0 10 chr10 101237458 101237560 -44351728 + L2 LINE L2 3202 3302 -11 316 269 107 27 chr10 101237768 101237917 -44351371 + MIR SINE MIR 53 213 -49 1938 102 48 10 chr10 101237917 101238279 -44351009 + AluSg SINE Alu 1 373 0 191 286 36 0 chr10 101238279 101238335 -44350953 + MIR SINE MIR 205 262 0 350 214 33 34 chr10 101238390 101238506 -44350782 + L1MC4 LINE L1 7832 8033 -9 523 282 214 39 chr10 101238560 101238717 -44350571 - L2 LINE L2 0 3313 3185 1583 138 58 0 chr10 101238717 101238977 -44350311 + AluSx SINE Alu 1 275 -37 523 282 214 39 chr10 101238977 101239230 -44350058 - L2 LINE L2 -128 3185 2831 1752 113 75 10 chr10 101239230 101239523 -44349765 + AluSx SINE Alu 1 312 0 645 181 0 0 chr10 101239526 101239659 -44349629 + GA-rich Low_complexity Low_complexity 3 135 0 1209 207 92 58 chr10 101240078 101240205 -44349083 + MER113 DNA MER1_type? 1 122 -399 2091 129 3 0 chr10 101240205 101240514 -44348774 + AluSq SINE Alu 2 311 -2 1209 207 92 58 chr10 101240514 101240701 -44348587 + MER113 DNA MER1_type? 122 337 -184 2127 130 0 0 chr10 101240701 101241008 -44348280 + AluSx SINE Alu 1 307 -5 1209 207 92 58 chr10 101241008 101241127 -44348161 + MER113 DNA MER1_type? 337 450 -71 422 292 56 21 chr10 101241427 101241571 -44347717 + MIR SINE MIR 99 247 -15 1485 122 36 0 chr10 101242700 101242921 -44346367 + MER30 DNA MER1_type 2 230 0 1172 152 57 14 chr10 101242929 101243139 -44346149 - MER20 DNA MER1_type 0 219 1 220 224 20 0 chr10 101243309 101243358 -44345930 + CT-rich Low_complexity Low_complexity 3 52 0 2008 114 3 7 chr10 101243526 101243844 -44345444 + AluSx SINE Alu 1 312 0 774 191 0 0 chr10 101243857 101243983 -44345305 + FLAM_C SINE Alu 2 127 -16 468 294 184 0 chr10 101244130 101244293 -44344995 - MIR SINE MIR -59 203 11 934 155 0 7 chr10 101244726 101244881 -44344407 - AluSq SINE Alu -159 154 1 262 77 0 39 chr10 101244884 101244936 -44344352 + (TCTCC)n Simple_repeat Simple_repeat 2 51 0 355 254 93 103 chr10 101245074 101245589 -44343699 + MLT1J LTR MaLR 2 511 0 2209 109 3 3 chr10 101245589 101245928 -44343360 + AluSx SINE Alu 1 339 0 1184 134 6 11 chr10 101245933 101246112 -44343176 + AluSg/x SINE Alu 108 285 -27 1167 307 62 53 chr10 101246377 101247285 -44342003 - L2 LINE L2 -218 3054 2134 1281 159 136 30 chr10 101247491 101247755 -44341533 - AluJo SINE Alu -20 292 1 204 200 0 0 chr10 101248718 101248753 -44340535 + L2 LINE L2 3168 3202 -70 3074 155 65 24 chr10 101248753 101249263 -44340025 - MLT1F1 LTR MaLR -9 558 24 1811 153 7 0 chr10 101249263 101249557 -44339731 - AluJb SINE Alu -16 296 1 3074 155 65 24 chr10 101249557 101249582 -44339706 - MLT1F1 LTR MaLR -543 24 1 313 296 0 0 chr10 101249583 101249654 -44339634 + L2 LINE L2 3197 3267 -5 24 0 0 0 chr10 101249934 101249958 -44339330 + AT_rich Low_complexity Low_complexity 1 24 0 2259 95 3 0 chr10 101250064 101250368 -44338920 + AluSx SINE Alu 1 305 -7 1100 184 0 0 chr10 101250552 101250726 -44338562 - FAM SINE Alu -1 174 1 481 340 61 14 chr10 101250733 101251019 -44338269 + LTR16B LTR ERVL 77 418 -32 650 255 69 29 chr10 101251434 101251638 -44337650 + MIR SINE MIR 14 225 -37 577 257 60 100 chr10 101251640 101251990 -44337298 - LTR67 LTR ERVL 0 557 222 182 257 0 14 chr10 101252005 101252079 -44337209 + C-rich Low_complexity Low_complexity 2 74 0 2218 109 3 0 chr10 101252182 101252494 -44336794 + AluSp SINE Alu 1 313 0 203 108 0 54 chr10 101252530 101252567 -44336721 + (TTCC)n Simple_repeat Simple_repeat 3 37 0 427 320 55 5 chr10 101252585 101252804 -44336484 + L2 LINE L2 1827 2056 -1258 736 264 66 47 chr10 101252832 101253090 -44336198 - MLT1B LTR MaLR -15 375 113 * 1095 110 14 120 chr10 101253086 101253135 -44336153 - MSTC LTR MaLR -14 414 361 2235 122 0 0 chr10 101253135 101253429 -44335859 - AluSx SINE Alu -18 294 1 1095 110 14 120 chr10 101253429 101253588 -44335700 - MSTC LTR MaLR -67 361 228 743 144 0 45 chr10 101253590 101253722 -44335566 - MSTC LTR MaLR -302 126 1 697 185 0 0 chr10 101253722 101253841 -44335447 - MLT1B LTR MaLR -348 119 1 293 322 49 53 chr10 101253882 101254041 -44335247 + L2 LINE L2 2174 2333 -981 1878 164 3 3 chr10 101254041 101254340 -44334948 - AluJo SINE Alu -13 299 1 293 322 49 53 chr10 101254340 101254425 -44334863 + L2 LINE L2 2333 2417 -897 1950 119 60 0 chr10 101254534 101254819 -44334469 - AluSx SINE Alu -10 302 1 316 318 71 16 chr10 101255523 101255649 -44333639 - MIR3 SINE MIR -5 203 71 295 250 0 0 chr10 101255699 101255767 -44333521 - MIR SINE MIR 0 262 195 358 292 17 25 chr10 101256049 101256189 -44333099 + CT-rich Low_complexity Low_complexity 1 238 0 1544 172 24 34 chr10 101256213 101256504 -44332784 + AluJo SINE Alu 22 309 -3 2050 91 0 8 chr10 101256506 101256798 -44332490 + AluSx SINE Alu 26 315 0 4972 160 19 59 chr10 101256937 101257050 -44332238 - L1MB5 LINE L1 -8 6166 6050 2190 108 23 3 chr10 101257050 101257355 -44331933 - AluSq SINE Alu -2 311 1 4972 160 19 59 chr10 101257355 101258079 -44331209 - L1MB5 LINE L1 -124 6050 5299 793 57 28 0 chr10 101258079 101258185 -44331103 - HY1 scRNA scRNA -3 109 1 4972 160 19 59 chr10 101258185 101258369 -44330919 - L1MB5 LINE L1 -875 5299 5109 1261 106 27 0 chr10 101258369 101258557 -44330731 - L1MA4 LINE L1 -11 6289 6097 4972 160 19 59 chr10 101258557 101258804 -44330484 - L1MB5 LINE L1 -1065 5109 4958 2407 90 3 6 chr10 101258804 101259115 -44330173 - AluSx SINE Alu -2 310 1 4972 160 19 59 chr10 101259115 101259246 -44330042 - L1MB5 LINE L1 -1216 4958 4823 1211 139 5 11 chr10 101259249 101259436 -44329852 - AluSg/x SINE Alu -4 306 121 2385 69 0 13 chr10 101259440 101259743 -44329545 - AluY SINE Alu -12 299 1 2621 167 5 7 chr10 101260183 101260970 -44328318 - L1P4 LINE L1 -573 5593 4810 1284 225 37 10 chr10 101260974 101261272 -44328016 - L1ME1 LINE L1 -286 5880 5575 555 250 134 12 chr10 101261276 101261435 -44327853 - MLT1C LTR MaLR -4 501 322 1621 152 7 40 chr10 101261435 101261712 -44327576 - AluSx SINE Alu -17 295 28 5437 133 134 19 chr10 101261712 101262749 -44326539 - MER52C LTR ERV1 -11 1267 112 1104 176 109 21 chr10 101262777 101262897 -44326391 - MLT1C LTR MaLR -153 314 206 2174 77 45 0 chr10 101262897 101263183 -44326105 - AluY SINE Alu -3 308 10 1104 176 109 21 chr10 101263183 101263346 -44325942 - MLT1C LTR MaLR -261 206 6 337 215 0 0 chr10 101263351 101263416 -44325872 - L1ME1 LINE L1 -603 5563 5499 798 301 63 30 chr10 101263418 101263717 -44325571 - MLT1K LTR MaLR -268 320 12 422 286 101 31 chr10 101263794 101263890 -44325398 - MIR SINE MIR -17 245 157 2272 109 3 0 chr10 101263890 101264194 -44325094 - AluSx SINE Alu -7 305 1 422 286 101 31 chr10 101264194 101264324 -44324964 - MIR SINE MIR -105 157 3 216 0 0 0 chr10 101264418 101264442 -44324846 + (T)n Simple_repeat Simple_repeat 1 24 0 1107 279 46 27 chr10 101264748 101265117 -44324171 - L1MCc LINE L1 -5949 474 99 2185 99 0 35 chr10 101265168 101265482 -44323806 - AluSq SINE Alu -10 303 1 428 231 16 121 chr10 101265545 101265665 -44323623 - MER103 DNA DNA -2 164 68 2086 127 3 0 chr10 101265665 101265949 -44323339 - AluSq SINE Alu -28 285 1 428 231 16 121 chr10 101265949 101266010 -44323278 - MER103 DNA DNA -98 68 2 2238 128 0 0 chr10 101266288 101266600 -44322688 + AluSx SINE Alu 1 312 0 190 280 178 25 chr10 101268336 101268454 -44320834 - MIR SINE MIR -78 184 49 225 226 48 32 chr10 101268518 101268580 -44320708 + L2 LINE L2 2998 3060 -212 1728 147 3 60 chr10 101268774 101268903 -44320385 + AluJo SINE Alu 1 136 -176 2272 91 7 0 chr10 101268903 101269188 -44320100 - AluSc SINE Alu -22 287 1 1728 147 3 60 chr10 101269188 101269372 -44319916 + AluJo SINE Alu 136 296 -16 681 312 69 4 chr10 101269450 101269681 -44319607 + MIR SINE MIR 17 262 0 254 174 163 23 chr10 101270335 101270421 -44318867 + MIR3 SINE MIR 104 201 -7 331 325 42 30 chr10 101270883 101271049 -44318239 + MER5A DNA MER1_type 21 188 -1 459 289 91 0 chr10 101271147 101271334 -44317954 + MIR SINE MIR 58 261 -1 1776 171 20 13 chr10 101271365 101271482 -44317806 + AluJo SINE Alu 1 116 -196 342 0 0 0 chr10 101271482 101271520 -44317768 + (CA)n Simple_repeat Simple_repeat 2 39 0 1776 171 20 13 chr10 101271520 101271701 -44317587 + AluJo SINE Alu 116 301 -11 1720 162 26 35 chr10 101271802 101272142 -44317146 - MLT1A1 LTR MaLR 0 365 29 306 0 0 0 chr10 101272881 101272915 -44316373 + (TG)n Simple_repeat Simple_repeat 1 34 0 1792 33 0 19 chr10 101273069 101273280 -44316008 - AluY SINE Alu -104 207 1 414 145 0 0 chr10 101273977 101274039 -44315249 + FLAM_A SINE Alu 49 110 -32 189 0 0 0 chr10 101274051 101274072 -44315216 + (TAA)n Simple_repeat Simple_repeat 2 22 0 224 270 54 27 chr10 101274287 101274361 -44314927 + MIR3 SINE MIR 110 185 -23 2151 114 31 0 chr10 101274638 101274927 -44314361 - AluSx SINE Alu -14 298 1 2390 95 0 0 chr10 101274928 101275224 -44314064 - AluSq SINE Alu -13 300 5 479 356 72 29 chr10 101275246 101275732 -44313556 + L2 LINE L2 2745 3256 -16 2197 121 3 0 chr10 101275732 101276030 -44313258 + AluSx SINE Alu 1 299 -13 479 356 72 29 chr10 101276030 101276048 -44313240 + L2 LINE L2 3256 3272 0 462 197 34 68 chr10 101277137 101277284 -44312004 + MIR SINE MIR 81 222 -40 651 294 121 48 chr10 101278799 101279346 -44309942 - L1MC4a LINE L1 -1902 5906 5320 595 228 176 80 chr10 101279409 101279795 -44309493 - MLT1L LTR MaLR -4 611 189 1855 158 28 0 chr10 101279814 101280099 -44309189 - AluJo SINE Alu -17 295 3 1988 156 0 0 chr10 101280249 101280553 -44308735 + AluSx SINE Alu 3 306 0 2458 94 0 0 chr10 101281221 101281528 -44307760 - AluSx SINE Alu -5 307 1 658 192 144 39 chr10 101281736 101281965 -44307323 - L1MC4a LINE L1 -1724 4422 4170 2239 115 0 6 chr10 101282655 101282969 -44306319 - AluSx SINE Alu 0 312 1 262 302 22 86 chr10 101283360 101283416 -44305872 + MIR SINE MIR 1 59 -203 2274 102 0 16 chr10 101283416 101283731 -44305557 - AluSx SINE Alu -2 310 1 262 302 22 86 chr10 101283731 101283813 -44305475 + MIR SINE MIR 59 130 -132 194 221 11 126 chr10 101284048 101284143 -44305145 + L3 LINE CR1 933 1016 -561 180 198 279 12 chr10 101284162 101284248 -44305040 - MIR3 SINE MIR -7 201 93 1746 176 44 0 chr10 101284302 101284621 -44304667 - L1MB5 LINE L1 0 6174 5842 293 285 160 47 chr10 101284622 101284915 -44304373 - L1ME4a LINE L1 -37 6084 5754 1958 138 0 3 chr10 101284915 101285225 -44304063 + AluSx SINE Alu 1 309 0 293 285 160 47 chr10 101285225 101285239 -44304049 - L1ME4a LINE L1 -367 5754 5743 438 296 49 0 chr10 101285491 101285633 -44303655 + MIR3 SINE MIR 20 168 -40 392 181 28 0 chr10 101285985 101286057 -44303231 + L1MD3 LINE L1 7733 7806 -189 1268 221 5 49 chr10 101286057 101286407 -44302881 + MLT2B1 LTR ERVL 1 416 -104 2066 122 3 3 chr10 101286409 101286695 -44302593 + AluSx SINE Alu 1 286 -26 1366 164 141 4 chr10 101287056 101287325 -44301963 + AluJo SINE Alu 7 312 0 4250 203 31 52 chr10 101287476 101287929 -44301359 + L1M4 LINE L1 348 809 -5837 180 0 0 0 chr10 101287929 101287949 -44301339 + (TTG)n Simple_repeat Simple_repeat 2 21 0 4250 203 31 52 chr10 101287949 101289045 -44300243 + L1M4 LINE L1 809 1879 -4767 519 194 34 22 chr10 101289056 101289217 -44300071 + L1M4 LINE L1 2050 2305 -4341 277 344 16 32 chr10 101289435 101289624 -44299664 + L2 LINE L2 2372 2557 -757 608 369 5 0 chr10 101289627 101289841 -44299447 + MLT1J LTR MaLR 5 219 -292 962 271 65 17 chr10 101289888 101290179 -44299109 + MLT1J LTR MaLR 205 509 -2 401 306 50 22 chr10 101290204 101290384 -44298904 + L2 LINE L2 2574 2758 -556 186 43 0 0 chr10 101290393 101290416 -44298872 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1816 159 3 3 chr10 101290435 101290736 -44298552 - AluJo SINE Alu -11 301 1 470 117 13 0 chr10 101291001 101291078 -44298210 + L1MC3 LINE L1 7708 7785 0 1109 106 0 7 chr10 101291088 101291239 -44298049 + AluSq/x SINE Alu 1 150 -162 259 125 42 21 chr10 101291239 101291287 -44298001 + AluS SINE Alu 220 268 -34 366 232 92 42 chr10 101291394 101291536 -44297752 - MIR SINE MIR -82 180 32 1932 138 7 0 chr10 101291715 101292023 -44297265 - AluSx SINE Alu 0 314 5 2583 87 20 0 chr10 101292608 101292953 -44296335 - LTR1 LTR ERV1 0 785 434 2262 114 0 3 chr10 101292954 101293261 -44296027 - AluSx SINE Alu -6 306 1 225 275 150 18 chr10 101293261 101293330 -44295958 - L1M4 LINE L1 -755 5391 5332 1824 181 0 22 chr10 101293330 101293645 -44295643 - AluJo SINE Alu -4 308 1 225 275 150 18 chr10 101293645 101293848 -44295440 - L1M4 LINE L1 -814 5332 5083 836 225 6 0 chr10 101294000 101294169 -44295119 - AluJo/FRAM SINE Alu -6 306 137 803 176 33 33 chr10 101294170 101294323 -44294965 - AluJo SINE Alu -138 174 22 805 298 52 9 chr10 101294334 101294678 -44294610 - L1M4 LINE L1 -1302 4844 4477 1363 187 23 95 chr10 101294678 101295069 -44294219 - MLT1A1 LTR MaLR -2 363 1 805 298 52 9 chr10 101295069 101295144 -44294144 - L1M4 LINE L1 -1669 4477 4407 335 243 149 28 chr10 101295792 101295899 -44293389 + L2 LINE L2 3194 3313 0 654 298 31 26 chr10 101296145 101296373 -44292915 - MIR SINE MIR -31 231 3 2323 117 7 0 chr10 101296596 101296781 -44292507 - AluSx SINE Alu -1 311 122 207 0 0 0 chr10 101296781 101296804 -44292484 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2323 117 7 0 chr10 101296804 101296927 -44292361 - AluSx SINE Alu -190 122 1 25 51 0 0 chr10 101297031 101297070 -44292218 + AT_rich Low_complexity Low_complexity 1 39 0 2426 141 16 3 chr10 101297177 101297561 -44291727 - MLT1B LTR MaLR 0 390 2 430 196 109 22 chr10 101298206 101298344 -44290944 - L1MC5 LINE L1 -106 7855 7706 494 265 77 18 chr10 101298462 101298632 -44290656 + MIR SINE MIR 49 228 -34 192 217 0 22 chr10 101298669 101298715 -44290573 + MIR SINE MIR 217 261 -1 1917 166 0 0 chr10 101299248 101299562 -44289726 - AluSx SINE Alu 0 314 1 245 206 55 0 chr10 101299633 101299706 -44289582 + HAL1b LINE L1 83 159 -1189 333 261 54 9 chr10 101299719 101299830 -44289458 + HAL1b LINE L1 280 395 -953 1181 181 147 11 chr10 101299838 101300104 -44289184 - AluJo SINE Alu 0 302 1 1969 221 86 79 chr10 101300373 101301220 -44288068 + HAL1b LINE L1 440 1292 -56 215 410 0 0 chr10 101301524 101301619 -44287669 + MIR SINE MIR 30 124 -84 359 200 0 12 chr10 101301664 101301749 -44287539 + (TA)n Simple_repeat Simple_repeat 2 85 0 327 245 151 79 chr10 101301754 101301893 -44287395 - Charlie8 DNA MER1_type -2305 112 4 828 242 7 0 chr10 101301923 101302076 -44287212 - MER63A DNA MER1_type 0 210 57 252 309 82 10 chr10 101302563 101302660 -44286628 - MER91A DNA MER1_type -91 105 2 1717 178 13 3 chr10 101302754 101303058 -44286230 + AluJb SINE Alu 1 307 -5 2935 6 0 0 chr10 101403318 101403636 -44185652 + AluYb8 SINE Alu 1 318 0 360 107 0 0 chr10 101403807 101403863 -44185425 - AluSp/q SINE Alu -2 301 246 201 445 39 0 chr10 101403934 101404062 -44185226 - L2 LINE L2 -18 3254 3122 511 201 13 81 chr10 101404171 101404320 -44184968 - MIR SINE MIR -2 260 122 268 344 0 31 chr10 101404325 101404421 -44184867 - L2 LINE L2 -299 2973 2881 47 19 0 0 chr10 101404511 101404565 -44184723 + AT_rich Low_complexity Low_complexity 1 54 0 834 136 8 0 chr10 101404566 101404691 -44184597 - FLAM_C SINE Alu -7 126 1 2025 137 7 0 chr10 101404902 101405201 -44184087 + AluSq SINE Alu 1 301 -12 259 316 105 21 chr10 101405443 101405538 -44183750 - L2 LINE L2 -2 3311 3209 2575 132 15 4 chr10 101405797 101406209 -44183079 - L1MB2 LINE L1 -39 6132 5717 408 155 0 0 chr10 101406300 101406371 -44182917 + (TCCG)n Simple_repeat Simple_repeat 2 72 0 1213 272 68 42 chr10 101406371 101406884 -44182404 - L2 LINE L2 0 3313 2785 21 0 0 0 chr10 101407029 101407050 -44182238 + AT_rich Low_complexity Low_complexity 1 21 0 1934 161 3 0 chr10 101407053 101407364 -44181924 + AluJb SINE Alu 1 312 0 874 208 128 7 chr10 101407847 101408135 -44181153 - L1M4 LINE L1 -1725 4421 4099 2115 130 10 0 chr10 101408199 101408499 -44180789 - AluSx SINE Alu -9 303 1 21 0 0 0 chr10 101408501 101408522 -44180766 + AT_rich Low_complexity Low_complexity 1 21 0 318 26 0 0 chr10 101408549 101408588 -44180700 + (TG)n Simple_repeat Simple_repeat 2 40 0 3144 173 20 58 chr10 101408738 101409374 -44179914 + LTR9 LTR ERV1 1 612 0 4219 121 55 2 chr10 101409477 101410080 -44179208 + MER41B LTR ERV1 1 635 0 963 158 43 111 chr10 101410370 101410604 -44178684 - MER20 DNA MER1_type 0 219 2 2300 105 0 3 chr10 101411286 101411592 -44177696 - AluSx SINE Alu -7 305 1 425 181 71 55 chr10 101411669 101411796 -44177492 + L1MC4 LINE L1 7914 8042 0 184 231 0 0 chr10 101412081 101412120 -44177168 - L2 LINE L2 0 3313 3275 2184 110 0 0 chr10 101412143 101412435 -44176853 - AluSq SINE Alu -21 292 1 1762 136 0 0 chr10 101412564 101412815 -44176473 - AluSx SINE Alu -56 256 6 302 261 99 0 chr10 101412988 101413099 -44176189 - MLT1H LTR MaLR 0 549 428 300 325 94 39 chr10 101413223 101413426 -44175862 - MLT1H LTR MaLR -299 250 37 21 0 0 0 chr10 101414198 101414219 -44175069 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 101414515 101414536 -44174752 + AT_rich Low_complexity Low_complexity 1 21 0 234 62 0 0 chr10 101415438 101415470 -44173818 + (TG)n Simple_repeat Simple_repeat 1 32 0 214 284 37 37 chr10 101416848 101416929 -44172359 - L2 LINE L2 -32 3240 3160 423 0 0 0 chr10 101416953 101417000 -44172288 + (CA)n Simple_repeat Simple_repeat 2 48 0 1495 173 33 23 chr10 101417260 101417560 -44171728 + AluJo SINE Alu 9 311 -1 2082 116 14 3 chr10 101418656 101418948 -44170340 + AluSx SINE Alu 1 295 -17 245 333 11 0 chr10 101419275 101419362 -44169926 + MER117 DNA MER1_type 1 88 -109 306 275 253 34 chr10 101420166 101420344 -44168944 + MIR SINE MIR 46 262 0 2255 128 23 77 chr10 101420485 101420531 -44168757 - L1MA7 LINE L1 -5 6286 6239 1706 176 24 3 chr10 101420531 101420821 -44168467 - AluJb SINE Alu -16 296 1 2255 128 23 77 chr10 101420821 101421202 -44168086 - L1MA7 LINE L1 -52 6239 5882 229 279 15 15 chr10 101421604 101421672 -44167616 + MIR SINE MIR 12 79 -183 510 283 86 5 chr10 101421756 101421943 -44167345 - L2 LINE L2 0 3313 3108 2440 84 0 0 chr10 101421943 101422242 -44167046 + AluSg SINE Alu 1 299 -11 333 0 0 0 chr10 101422304 101422341 -44166947 + (CAT)n Simple_repeat Simple_repeat 3 39 0 213 338 0 0 chr10 101422396 101422470 -44166818 + GA-rich Low_complexity Low_complexity 3 76 0 618 205 9 0 chr10 101422706 101422818 -44166470 - MER45A DNA AcHobo 0 178 66 188 292 0 46 chr10 101422856 101422921 -44166367 + L2 LINE L2 3210 3271 -1 2312 75 6 41 chr10 101423434 101423575 -44165713 + AluSc SINE Alu 1 145 -164 2180 88 37 0 chr10 101423575 101423869 -44165419 + AluSg1 SINE Alu 1 305 -4 2312 75 6 41 chr10 101423869 101424047 -44165241 + AluSc SINE Alu 145 309 0 322 157 191 11 chr10 101424098 101424187 -44165101 - L2 LINE L2 -6 3307 3203 551 328 17 0 chr10 101424603 101424783 -44164505 - MIR SINE MIR -48 214 32 2157 129 0 0 chr10 101425139 101425442 -44163846 + AluSx SINE Alu 1 303 -9 2303 100 3 0 chr10 101425525 101425836 -44163452 + AluSp SINE Alu 1 312 -1 662 140 20 20 chr10 101426256 101426356 -44162932 - FRAM SINE Alu -76 100 1 2614 173 22 31 chr10 101426591 101427099 -44162189 + MLT1D LTR MaLR 3 505 0 347 314 71 35 chr10 101427106 101427275 -44162013 - MIR SINE MIR -84 178 4 198 0 0 0 chr10 101427704 101427726 -44161562 + (T)n Simple_repeat Simple_repeat 1 22 0 26 30 0 0 chr10 101428647 101428680 -44160608 + GC_rich Low_complexity Low_complexity 1 33 0 24 0 0 0 chr10 101428699 101428723 -44160565 + GC_rich Low_complexity Low_complexity 1 24 0 470 268 0 57 chr10 101429671 101429794 -44159494 + MIR SINE MIR 34 149 -59 285 263 163 0 chr10 101429830 101429910 -44159378 + L2 LINE L2 3215 3307 -6 667 204 83 17 chr10 101430527 101430708 -44158580 - L1MC5 LINE L1 -46 7915 7723 6956 211 68 74 chr10 101430867 101431316 -44157972 + L1ME LINE L1 2787 3237 -2909 2409 95 0 13 chr10 101431316 101431632 -44157656 + AluSx SINE Alu 1 312 0 6956 211 68 74 chr10 101431632 101431741 -44157547 + L1ME LINE L1 3237 3345 -2801 1671 188 11 7 chr10 101431741 101432028 -44157260 + AluJb SINE Alu 1 288 -24 6956 211 68 74 chr10 101432028 101433846 -44155442 + L1ME LINE L1 3345 5150 -996 711 131 0 0 chr10 101433889 101433988 -44155300 + AluJ/FRAM SINE Alu 214 312 0 406 215 16 20 chr10 101433993 101434108 -44155180 + L1ME LINE L1 5205 5319 -847 2190 106 7 3 chr10 101434108 101434400 -44154888 + AluSc SINE Alu 1 293 -16 406 215 16 20 chr10 101434400 101434467 -44154821 + L1ME LINE L1 5319 5545 -621 * 1303 194 128 29 chr10 101434456 101434832 -44154456 - L1M4 LINE L1 -2121 4025 3613 943 203 0 25 chr10 101434830 101435032 -44154256 - L1M4c LINE L1 -2238 4719 4523 * 290 216 0 0 chr10 101435034 101435085 -44154203 - AluJo SINE Alu -168 134 84 925 216 4 44 chr10 101435085 101435312 -44153976 - AluJo SINE Alu -94 218 1 4897 209 98 16 chr10 101435312 101435812 -44153476 - L1M4c LINE L1 -2445 4512 4055 2238 116 3 0 chr10 101435812 101436114 -44153174 - AluSx SINE Alu -9 303 1 4897 209 98 16 chr10 101436114 101437196 -44152092 - L1M4c LINE L1 -2902 4055 2814 319 291 35 84 chr10 101437331 101437534 -44151754 - L1M4c LINE L1 -4486 2652 2460 197 98 24 0 chr10 101437732 101437773 -44151515 + (TG)n Simple_repeat Simple_repeat 1 42 0 3226 216 56 60 chr10 101437805 101438713 -44150575 - L1M4c LINE L1 -4564 2393 1447 2235 119 3 0 chr10 101438713 101439015 -44150273 - AluSx SINE Alu -9 303 1 3226 216 56 60 chr10 101439015 101439495 -44149793 - L1M4c LINE L1 -5510 1447 967 825 225 89 74 chr10 101439507 101439746 -44149542 - LTR16A1 LTR ERVL -47 410 163 465 90 0 0 chr10 101439746 101439813 -44149475 + (TG)n Simple_repeat Simple_repeat 2 68 0 825 225 89 74 chr10 101439813 101439897 -44149391 - LTR16A1 LTR ERVL -294 163 82 2668 168 28 18 chr10 101440090 101440216 -44149072 - L1MB3 LINE L1 -1 6182 6059 2053 85 48 17 chr10 101440216 101440511 -44148777 - AluSg SINE Alu -6 304 1 2668 168 28 18 chr10 101440511 101440891 -44148397 - L1MB3 LINE L1 -124 6059 5671 3940 229 29 34 chr10 101440909 101441840 -44147448 - L1M4c LINE L1 -5900 959 34 295 281 0 0 chr10 101441842 101441899 -44147389 - L1M4c LINE L1 -6793 66 10 1446 207 79 18 chr10 101441931 101442260 -44147028 - L1MB5 LINE L1 0 6174 5826 1749 150 57 40 chr10 101442260 101442613 -44146675 + MLT1A1 LTR MaLR 1 359 -6 1236 148 52 0 chr10 101442656 101442886 -44146402 - L1MB5 LINE L1 -343 5831 5590 528 244 104 110 chr10 101442946 101443437 -44145851 - MER31-int LTR ERV1 -1653 3283 2796 867 142 0 8 chr10 101443445 101443572 -44145716 + FLAM_C SINE Alu 1 126 -17 2543 64 0 10 chr10 101443581 101443895 -44145393 + AluY SINE Alu 1 311 0 249 159 23 0 chr10 101444377 101444421 -44144867 + Charlie1 DNA MER1_type 57 101 -2660 3289 169 14 2 chr10 101444421 101444930 -44144358 + MLT2B2 LTR ERVL 1 515 0 619 163 25 50 chr10 101444934 101445094 -44144194 + Charlie1 DNA MER1_type 2566 2721 -40 355 206 0 15 chr10 101445133 101445201 -44144087 - Tigger2 DNA MER2_type 0 2718 2652 1147 82 0 14 chr10 101445202 101445349 -44143939 + AluSq/x SINE Alu 1 145 -168 526 53 13 13 chr10 101445449 101445524 -44143764 - L1PBa LINE L1 -4266 2597 2523 7757 168 18 13 chr10 101445548 101447270 -44142018 + L1PB1 LINE L1 2241 3953 -2198 2142 99 3 3 chr10 101447270 101447612 -44141676 + AluSx SINE Alu 1 342 0 7757 168 18 13 chr10 101447612 101449367 -44139921 + L1PB1 LINE L1 3953 6149 -2 1399 171 0 34 chr10 101449373 101449612 -44139676 + AluJo SINE Alu 57 287 -25 2015 131 0 17 chr10 101449636 101449927 -44139361 - AluSq SINE Alu -27 286 1 254 343 0 9 chr10 101451316 101451424 -44137864 + MER5A DNA MER1_type 13 119 -70 273 208 38 9 chr10 101451473 101451579 -44137709 - Charlie1 DNA MER1_type -129 2632 2524 1222 172 75 43 chr10 101451664 101451943 -44137345 - Charlie1 DNA MER1_type -251 2510 2223 208 246 0 72 chr10 101451994 101452063 -44137225 + MER5A DNA MER1_type 123 186 -3 1249 220 106 58 chr10 101452750 101453232 -44136056 + MLT1J LTR MaLR 6 510 -1 235 274 29 29 chr10 101453755 101453930 -44135358 + T-rich Low_complexity Low_complexity 1 175 0 1017 156 0 75 chr10 101453939 101454011 -44135277 - AluJo SINE Alu -117 195 119 1991 120 27 23 chr10 101454011 101454310 -44134978 - AluSx SINE Alu -12 300 1 1017 156 0 75 chr10 101454310 101454436 -44134852 - AluJo SINE Alu -193 119 12 2295 109 0 0 chr10 101454548 101454850 -44134438 - AluSg SINE Alu -8 302 1 955 118 16 0 chr10 101454880 101455007 -44134281 + FLAM_C SINE Alu 1 129 -4 198 103 0 0 chr10 101455007 101455036 -44134252 + (TA)n Simple_repeat Simple_repeat 1 29 0 21 89 0 0 chr10 101455047 101455103 -44134185 + AT_rich Low_complexity Low_complexity 1 56 0 2309 109 0 3 chr10 101455142 101455453 -44133835 - AluSg SINE Alu 0 310 1 1700 152 64 20 chr10 101455811 101456108 -44133180 - AluJo SINE Alu -2 310 1 2110 98 0 14 chr10 101456324 101456609 -44132679 + AluSg SINE Alu 1 281 -29 1046 83 0 28 chr10 101456464 101456609 -44132679 + AluSg/x SINE Alu 143 303 0 181 0 0 0 chr10 101456609 101456629 -44132659 + (TAAA)n Simple_repeat Simple_repeat 2 132 0 210 186 23 0 chr10 101456882 101456925 -44132363 + (TGAA)n Simple_repeat Simple_repeat 3 46 0 367 309 62 57 chr10 101456944 101457432 -44131856 + L2 LINE L2 1886 2375 -939 405 0 0 0 chr10 101457440 101457485 -44131803 + (TG)n Simple_repeat Simple_repeat 2 46 0 729 217 90 12 chr10 101457560 101457726 -44131562 - MIR SINE MIR -64 198 20 331 280 53 82 chr10 101457859 101457934 -44131354 + MIR SINE MIR 6 82 -180 2270 98 0 0 chr10 101457934 101458230 -44131058 - AluSc SINE Alu -13 296 1 331 280 53 82 chr10 101458230 101458361 -44130927 + MIR SINE MIR 82 206 -56 1988 152 15 77 chr10 101458369 101458767 -44130521 + L1MB8 LINE L1 5740 6108 -70 2299 101 3 0 chr10 101458767 101459074 -44130214 - AluSx SINE Alu -4 308 1 1988 152 15 77 chr10 101459074 101459130 -44130158 + L1MB8 LINE L1 6108 6166 -12 2020 131 7 0 chr10 101459751 101460068 -44129220 + AluSx SINE Alu 1 319 0 2389 103 0 0 chr10 101460117 101460418 -44128870 + AluSq SINE Alu 4 304 -9 238 250 83 21 chr10 101460494 101460590 -44128698 - L2 LINE L2 -50 3263 3162 848 289 101 0 chr10 101463185 101463462 -44125826 + L2 LINE L2 914 1218 -2096 768 141 0 0 chr10 101463464 101463585 -44125703 - AluSg/x SINE Alu -5 307 187 1689 127 0 0 chr10 101463585 101463814 -44125474 - AluSx SINE Alu -83 229 1 315 223 89 62 chr10 101463814 101463926 -44125362 + L2 LINE L2 1211 1325 -1989 1293 118 0 16 chr10 101463926 101464113 -44125175 - AluSg/x SINE Alu -8 304 121 3501 196 88 95 chr10 101464113 101465382 -44123906 + L2 LINE L2 1338 2597 -717 1057 199 8 102 chr10 101465566 101465938 -44123350 + MLT1J LTR MaLR 93 429 -82 439 277 152 43 chr10 101466495 101466679 -44122609 + MIR SINE MIR 53 256 -6 443 330 150 34 chr10 101467345 101467724 -44121564 - L2 LINE L2 0 3272 2850 600 296 128 7 chr10 101467794 101468098 -44121190 - L2 LINE L2 -939 2375 2035 201 254 102 17 chr10 101468386 101468445 -44120843 + MIR SINE MIR 5 68 -194 708 317 79 4 chr10 101468891 101469131 -44120157 - MIR SINE MIR -1 261 4 3677 108 2 31 chr10 101469713 101469921 -44119367 - Tigger1 DNA MER2_type 0 2418 2205 1809 148 31 10 chr10 101469921 101470211 -44119077 + AluJb SINE Alu 1 296 -16 3677 108 2 31 chr10 101470211 101470588 -44118700 - Tigger1 DNA MER2_type -213 2205 1850 4731 131 61 11 chr10 101470622 101471436 -44117852 - Tigger1 DNA MER2_type -1540 878 24 1881 140 80 58 chr10 101471448 101471485 -44117803 - MSTA LTR MaLR -4 424 389 2215 107 10 3 chr10 101471485 101471784 -44117504 + AluSg SINE Alu 1 301 -9 2050 160 7 0 chr10 101471792 101472099 -44117189 + AluSx SINE Alu 1 309 -3 1881 140 80 58 chr10 101472099 101472467 -44116821 - MSTA LTR MaLR -45 383 1 2170 114 10 3 chr10 101473392 101473700 -44115588 - AluSq SINE Alu -3 310 1 1340 111 5 26 chr10 101474038 101474227 -44115061 - AluSx SINE Alu -97 215 31 2173 121 22 22 chr10 101474236 101474607 -44114681 - Tigger2a DNA MER2_type -63 371 1 21 36 0 0 chr10 101475013 101475041 -44114247 + AT_rich Low_complexity Low_complexity 1 28 0 1236 193 79 3 chr10 101476109 101476451 -44112837 - LTR37A LTR ERV1 0 426 59 447 303 82 20 chr10 101476560 101477198 -44112090 - L1M4 LINE L1 -964 5182 4506 300 111 0 0 chr10 101477281 101477326 -44111962 + (TCCC)n Simple_repeat Simple_repeat 3 47 0 849 151 14 14 chr10 101477326 101477465 -44111823 - AluJb SINE Alu -13 299 161 422 209 8 23 chr10 101477523 101477652 -44111636 - L1M4 LINE L1 -2145 4001 3875 875 161 7 7 chr10 101477669 101477812 -44111476 - AluJb SINE Alu -169 143 1 1663 204 0 4 chr10 101477836 101478115 -44111173 - AluJo SINE Alu -29 283 6 609 286 67 59 chr10 101478142 101478460 -44110828 - L1 LINE L1 -1792 4354 4040 2310 94 0 7 chr10 101478460 101478757 -44110531 - AluSx SINE Alu -10 302 8 609 286 67 59 chr10 101478757 101479095 -44110193 - L1 LINE L1 -2106 4040 3693 853 310 101 61 chr10 101479127 101479224 -44110064 - L1 LINE L1 -2470 3676 3584 2258 99 0 3 chr10 101479224 101479518 -44109770 - AluSc SINE Alu -16 293 1 853 310 101 61 chr10 101479518 101479755 -44109533 - L1 LINE L1 -2562 3584 3358 1523 160 113 11 chr10 101479755 101480030 -44109258 + AluJb SINE Alu 1 303 -9 2221 121 0 3 chr10 101480035 101480342 -44108946 + AluSx SINE Alu 1 306 -6 853 310 101 61 chr10 101480342 101481209 -44108079 - L1 LINE L1 -2791 3355 2420 2223 123 0 7 chr10 101482279 101482589 -44106699 + AluSx SINE Alu 1 308 -4 31 76 0 0 chr10 101484371 101484437 -44104851 + AT_rich Low_complexity Low_complexity 1 66 0 24 53 0 0 chr10 101484706 101484744 -44104544 + AT_rich Low_complexity Low_complexity 1 38 0 715 249 131 22 chr10 101484794 101485023 -44104265 - MIR SINE MIR -1 261 8 351 308 24 38 chr10 101485841 101486022 -44103266 + MIR SINE MIR 37 212 -50 29 60 0 0 chr10 101486307 101486357 -44102931 + AT_rich Low_complexity Low_complexity 1 50 0 435 247 102 24 chr10 101486940 101487267 -44102021 - MER50 LTR ERV1 -298 436 14 1523 187 57 3 chr10 101487710 101487993 -44101295 + AluJo SINE Alu 1 298 -14 1963 151 14 14 chr10 101488595 101488939 -44100349 + MER2 DNA MER2_type 1 344 0 23 54 0 0 chr10 101489394 101489431 -44099857 + AT_rich Low_complexity Low_complexity 1 37 0 871 236 132 82 chr10 101489480 101489920 -44099368 - MLT1H1 LTR MaLR -90 477 16 2240 129 21 19 chr10 101490188 101490561 -44098727 + THE1C LTR MaLR 2 375 0 2403 102 0 0 chr10 101490772 101491075 -44098213 + AluSq SINE Alu 1 303 -10 2240 128 0 6 chr10 101492397 101492709 -44096579 - AluSx SINE Alu -2 310 1 2263 99 3 3 chr10 101493893 101494187 -44095101 - AluSg SINE Alu -16 294 1 32 43 0 0 chr10 101494310 101494356 -44094932 + AT_rich Low_complexity Low_complexity 1 46 0 382 295 127 17 chr10 101495082 101495255 -44094033 + MIR SINE MIR 5 196 -66 198 190 310 0 chr10 101495414 101495472 -44093816 + MIR SINE MIR 187 262 0 2367 76 0 22 chr10 101495901 101496215 -44093073 - AluSq SINE Alu -6 307 1 353 347 68 0 chr10 101497395 101497542 -44091746 + MIR SINE MIR 50 206 -56 332 202 67 0 chr10 101497725 101497814 -44091474 - MIR SINE MIR -16 246 152 941 170 35 10 chr10 101497814 101498014 -44091274 - L1MC1 LINE L1 0 6333 6129 911 201 56 0 chr10 101498014 101498248 -44091040 - L1M4 LINE L1 -1196 4950 4704 1061 197 0 0 chr10 101498248 101498441 -44090847 - AluJo SINE Alu 0 312 120 1147 229 26 6 chr10 101498441 101498790 -44090498 - L1M4 LINE L1 -1454 4692 4337 357 284 0 0 chr10 101498790 101498878 -44090410 - MIR SINE MIR -104 158 71 1883 222 241 50 chr10 101498912 101499885 -44089403 - L2 LINE L2 0 3313 2133 37 0 0 0 chr10 101499915 101499952 -44089336 + AT_rich Low_complexity Low_complexity 1 37 0 2229 117 3 0 chr10 101499993 101500291 -44088997 - AluSx SINE Alu -13 299 1 1818 213 38 79 chr10 101500626 101501185 -44088103 - MER77 LTR ERV1 -10 595 60 675 268 83 31 chr10 101501285 101501513 -44087775 + MIR SINE MIR 2 241 -21 21 0 0 0 chr10 101502544 101502565 -44086723 + AT_rich Low_complexity Low_complexity 1 21 0 933 159 36 46 chr10 101504189 101504384 -44084904 - AluJo SINE Alu 0 312 120 368 274 46 26 chr10 101504476 101504629 -44084659 + L1MC4 LINE L1 6548 6703 -1339 342 67 0 0 chr10 101504648 101504693 -44084595 + (TA)n Simple_repeat Simple_repeat 1 45 0 2125 140 3 0 chr10 101504696 101505004 -44084284 - AluSx SINE Alu 0 312 4 1543 138 123 8 chr10 101505113 101505366 -44083922 - AluSg1 SINE Alu -27 282 1 4302 89 10 3 chr10 101505952 101506548 -44082740 + MER4A LTR ERV1 1 600 0 1784 157 7 43 chr10 101506651 101506956 -44082332 + AluJo SINE Alu 5 298 -14 201 195 24 0 chr10 101507866 101507907 -44081381 + (TATATG)n Simple_repeat Simple_repeat 2 43 0 695 190 0 0 chr10 101508657 101508773 -44080515 + FLAM_C SINE Alu 1 116 -17 335 291 12 81 chr10 101509099 101509346 -44079942 - HAL1 LINE L1 0 2507 2278 2039 231 129 33 chr10 101509429 101510221 -44079067 - L1MC4 LINE L1 -398 7644 6777 1630 149 16 57 chr10 101510226 101510542 -44078746 + AluJb SINE Alu 1 303 -9 294 29 0 0 chr10 101510578 101510613 -44078675 + (CA)n Simple_repeat Simple_repeat 2 36 0 913 233 105 54 chr10 101510627 101511073 -44078215 - HAL1 LINE L1 -1033 1474 1006 249 247 52 0 chr10 101511056 101511133 -44078155 + L1ME3A LINE L1 6080 6160 -10 * 239 308 66 0 chr10 101511125 101511216 -44078072 - L1ME3A LINE L1 -79 6091 5995 * 1554 207 129 101 chr10 101511207 101511860 -44077428 - L1ME2 LINE L1 -91 6073 5403 254 401 6 18 chr10 101511892 101512059 -44077229 + L3b LINE CR1 1296 1460 -123 253 184 20 38 chr10 101512065 101512180 -44077108 - L1ME2 LINE L1 -785 5381 5278 * 5617 179 53 23 chr10 101512148 101513977 -44075311 - L1MC2 LINE L1 -11 7128 5262 723 236 79 29 chr10 101513979 101514220 -44075068 - L1MC2 LINE L1 -1871 5070 4818 * 2020 265 28 0 chr10 101514218 101514791 -44074497 - L1MC2 LINE L1 -3363 3578 2990 286 206 14 14 chr10 101514815 101514888 -44074400 - L1MC2 LINE L1 -5079 1344 1272 22 35 0 0 chr10 101515191 101515220 -44074068 + AT_rich Low_complexity Low_complexity 1 29 0 298 282 11 98 chr10 101515587 101515761 -44073527 - LTR16C LTR ERVL 0 491 333 1984 149 17 0 chr10 101516568 101516863 -44072425 - AluSx SINE Alu -10 302 3 204 363 53 18 chr10 101517094 101517207 -44072081 + MIR SINE MIR 59 175 -87 32 43 0 0 chr10 101517478 101517524 -44071764 + AT_rich Low_complexity Low_complexity 1 46 0 24 32 0 0 chr10 101518147 101518178 -44071110 + AT_rich Low_complexity Low_complexity 1 31 0 1921 213 112 8 chr10 101518609 101519107 -44070181 + L1ME2 LINE L1 5605 6154 -10 2278 67 3 0 chr10 101519159 101519441 -44069847 + AluY SINE Alu 1 283 -28 303 224 224 16 chr10 101519467 101519592 -44069696 + L1MC5 LINE L1 7787 7937 -24 279 0 0 0 chr10 101520412 101520443 -44068845 + (TC)n Simple_repeat Simple_repeat 2 32 0 * 402 57 0 0 chr10 101520442 101520495 -44068793 + (TG)n Simple_repeat Simple_repeat 2 54 0 237 331 75 50 chr10 101520694 101520794 -44068494 + L2 LINE L2 2310 2417 -897 7121 43 27 2 chr10 101520794 101521669 -44067619 - MER11D LTR ERVK 0 897 1 237 331 75 50 chr10 101521669 101521728 -44067560 + L2 LINE L2 2417 2473 -841 1795 111 19 0 chr10 101522541 101522803 -44066485 + MER1B DNA MER1_type 1 267 -72 325 158 18 0 chr10 101522852 101522909 -44066379 + MER103 DNA DNA 7 64 -102 1564 128 7 95 chr10 101523770 101524075 -44065213 + AluJb SINE Alu 1 278 -34 198 0 0 0 chr10 101524076 101524098 -44065190 + (T)n Simple_repeat Simple_repeat 1 22 0 341 239 84 71 chr10 101524099 101524254 -44065034 + L1M4 LINE L1 3252 3408 -2738 1002 230 137 65 chr10 101524532 101524739 -44064549 + MER65B LTR ERV1 1 192 -339 2034 146 3 0 chr10 101524739 101525041 -44064247 + AluSx SINE Alu 1 303 -9 1002 230 137 65 chr10 101525041 101525328 -44063960 + MER65B LTR ERV1 192 531 0 2219 86 3 13 chr10 101525468 101525771 -44063517 - AluSg SINE Alu -6 304 5 229 292 0 15 chr10 101525957 101526022 -44063266 + L2 LINE L2 2440 2503 -811 1387 178 34 66 chr10 101526029 101526349 -44062939 - AluJo SINE Alu -1 311 2 1497 174 31 14 chr10 101526380 101526673 -44062615 + AluJb SINE Alu 1 298 -14 1744 180 0 32 chr10 101526923 101527234 -44062054 - AluJo SINE Alu -11 301 1 232 119 45 75 chr10 101527333 101527400 -44061888 + L1MCa LINE L1 2006 2070 -4356 22 0 0 0 chr10 101527519 101527541 -44061747 + AT_rich Low_complexity Low_complexity 1 22 0 432 231 128 19 chr10 101527925 101528081 -44061207 + MER104 DNA Tc2 5 177 -3 554 192 58 64 chr10 101528714 101528886 -44060402 - L1MEc LINE L1 -4359 2037 1867 766 155 14 0 chr10 101528893 101529035 -44060253 - L1MB7 LINE L1 0 6184 6041 2298 225 57 19 chr10 101529061 101529751 -44059537 - L1M4c LINE L1 -3456 2926 2199 2158 108 0 10 chr10 101529751 101530058 -44059230 - AluSq SINE Alu -9 304 1 2298 225 57 19 chr10 101530058 101530130 -44059158 - L1M4c LINE L1 -4183 2199 2131 1333 150 0 5 chr10 101530148 101530355 -44058933 - AluJb SINE Alu -2 310 105 2269 100 0 0 chr10 101530457 101530756 -44058532 - AluSx SINE Alu -13 299 1 404 281 109 47 chr10 101530801 101530993 -44058295 + MIR SINE MIR 58 261 -1 266 231 148 19 chr10 101531389 101531497 -44057791 + Charlie2a DNA MER1_type 36 157 -2705 345 316 120 13 chr10 101531630 101531855 -44057433 + LTR16A1 LTR ERVL 209 457 0 2036 205 127 8 chr10 101531862 101532344 -44056944 - MLT1F LTR MaLR -2 540 2 2372 239 117 51 chr10 101532348 101533194 -44056094 + Charlie2a DNA MER1_type 207 1148 -1714 2069 136 45 6 chr10 101533194 101533524 -44055764 - L1PB3 LINE L1 0 6154 5812 2372 239 117 51 chr10 101533524 101533802 -44055486 + Charlie2a DNA MER1_type 1148 1406 -1456 2196 122 0 0 chr10 101533810 101534104 -44055184 - AluSx SINE Alu -17 295 2 1199 183 33 44 chr10 101534158 101534431 -44054857 - AluJo SINE Alu 0 312 43 469 210 11 91 chr10 101534439 101534625 -44054663 + Charlie2a DNA MER1_type 1482 1652 -1210 605 230 227 24 chr10 101534633 101534964 -44054324 + Charlie2a DNA MER1_type 2218 2615 -247 210 118 0 0 chr10 101535028 101535062 -44054226 + (A)n Simple_repeat Simple_repeat 1 34 0 1662 196 4 0 chr10 101535062 101535343 -44053945 - AluJo SINE Alu -30 282 1 399 221 57 19 chr10 101535369 101535527 -44053761 + Charlie2a DNA MER1_type 2664 2827 -35 397 287 0 0 chr10 101535853 101535940 -44053348 - L2 LINE L2 -2 3270 3184 835 241 55 5 chr10 101535982 101536181 -44053107 - MER3 DNA MER1_type 0 209 1 371 374 37 11 chr10 101536222 101536412 -44052876 - L2 LINE L2 -164 3108 2914 637 202 23 23 chr10 101537018 101537147 -44052141 - L2 LINE L2 -5 3308 3180 414 199 82 17 chr10 101537297 101537457 -44051831 + L1ME1 LINE L1 6041 6333 -1 401 323 75 75 chr10 101537557 101537959 -44051329 + L1MEc LINE L1 246 647 -5472 598 266 103 56 chr10 101537984 101538569 -44050719 + L1MEc LINE L1 720 1363 -4867 * 726 213 20 82 chr10 101538545 101538731 -44050557 + L1ME1 LINE L1 2567 2737 -3392 2265 81 0 3 chr10 101538731 101539038 -44050250 + AluSx SINE Alu 1 306 0 726 213 20 82 chr10 101539038 101539094 -44050194 + L1ME1 LINE L1 2737 2795 -3334 1181 200 59 59 chr10 101539095 101539354 -44049934 + L1ME1 LINE L1 4915 5176 -953 2405 74 0 0 chr10 101539354 101539650 -44049638 + AluSc SINE Alu 13 308 -1 1181 200 59 59 chr10 101539650 101539795 -44049493 + L1ME1 LINE L1 5175 5319 -810 674 110 0 18 chr10 101539901 101540010 -44049278 - L1MA5 LINE L1 -5 6295 6189 3237 205 29 34 chr10 101540164 101540950 -44048338 + L1ME1 LINE L1 5363 6144 -5 413 279 113 17 chr10 101541026 101541266 -44048022 + L1MEc LINE L1 1470 1732 -4578 676 277 62 6 chr10 101541619 101541969 -44047319 + L1MEc LINE L1 2417 2785 -3344 273 265 36 128 chr10 101542191 101542410 -44046878 - L2 LINE L2 -561 2753 2555 560 229 79 0 chr10 101542414 101542554 -44046734 + L2 LINE L2 3158 3308 -5 24 77 0 0 chr10 101543514 101543566 -44045722 + AT_rich Low_complexity Low_complexity 1 52 0 186 315 154 21 chr10 101544715 101544858 -44044430 + MIR SINE MIR 28 189 -73 750 95 16 32 chr10 101544987 101545113 -44044175 + AluSg/x SINE Alu 189 312 0 1988 134 160 11 chr10 101545128 101545509 -44043779 - SATR1 Satellite Satellite -20 450 13 289 105 0 105 chr10 101546236 101546293 -44042995 - MADE1 DNA Mariner 0 80 30 348 119 51 0 chr10 101546331 101546390 -44042898 + MER5C DNA MER1_type 1 62 -262 357 359 65 75 chr10 101547125 101547496 -44041792 - L2 LINE L2 0 3272 2906 186 43 0 0 chr10 101547893 101547916 -44041372 + (TG)n Simple_repeat Simple_repeat 1 23 0 3662 121 34 10 chr10 101549404 101550018 -44039270 - L1MB3 LINE L1 -3 6180 5552 216 250 0 0 chr10 101550343 101550407 -44038881 + CT-rich Low_complexity Low_complexity 1 64 0 1853 149 0 17 chr10 101550598 101550887 -44038401 + AluJo SINE Alu 5 288 -24 24 32 0 0 chr10 101551055 101551086 -44038202 + AT_rich Low_complexity Low_complexity 1 31 0 223 122 0 49 chr10 101551123 101551164 -44038124 + (ATATG)n Simple_repeat Simple_repeat 2 40 0 2165 92 10 0 chr10 101551510 101551803 -44037485 - AluY SINE Alu -15 296 1 5373 119 36 64 chr10 101552072 101552710 -44036578 - L1MA7 LINE L1 -1 6290 5636 2030 142 0 10 chr10 101552710 101553020 -44036268 - AluSx SINE Alu -5 307 1 5373 119 36 64 chr10 101553020 101553258 -44036030 - L1MA7 LINE L1 -655 5636 5393 2280 94 3 0 chr10 101553258 101553556 -44035732 - AluSp SINE Alu -14 299 1 5373 119 36 64 chr10 101553556 101553949 -44035339 - L1MA7 LINE L1 -898 5393 5060 212 222 74 0 chr10 101553966 101554020 -44035268 + L2 LINE L2 3207 3264 -8 419 148 194 46 chr10 101554198 101554306 -44034982 - FLAM_C SINE Alu -9 134 11 957 113 0 108 chr10 101554416 101554493 -44034795 + AluJb SINE Alu 136 183 -129 2288 64 0 20 chr10 101554493 101554791 -44034497 + AluY SINE Alu 1 292 -19 957 113 0 108 chr10 101554791 101554898 -44034390 + AluJb SINE Alu 183 300 -12 248 317 171 67 chr10 101554916 101555564 -44033724 + L2 LINE L2 2550 3297 -16 342 215 76 0 chr10 101555613 101555692 -44033596 - MLT1I LTR MaLR -7 402 318 420 256 105 8 chr10 101555771 101555904 -44033384 - MLT1I LTR MaLR -184 225 80 2186 97 13 3 chr10 101556112 101556410 -44032878 + AluSc SINE Alu 1 301 -8 588 29 0 0 chr10 101557036 101557106 -44032182 + (CTA)n Simple_repeat Simple_repeat 2 71 0 422 290 82 33 chr10 101558019 101558079 -44031209 + MIR3 SINE MIR 8 64 -144 2221 96 3 13 chr10 101558079 101558380 -44030908 - AluSq SINE Alu -15 298 1 422 290 82 33 chr10 101558380 101558502 -44030786 + MIR3 SINE MIR 64 199 -9 227 339 140 58 chr10 101558931 101559102 -44030186 - L2 LINE L2 -14 3258 3074 1723 319 100 14 chr10 101559103 101560044 -44029244 - L2 LINE L2 -418 2896 1875 3269 102 32 96 chr10 101560942 101561539 -44027749 - L1PA16 LINE L1 -1 6165 5607 1845 178 0 6 chr10 101561549 101561863 -44027425 - AluJo SINE Alu 0 312 1 855 164 87 87 chr10 101561932 101562151 -44027137 + MER20 DNA MER1_type 1 219 0 24 32 0 0 chr10 101562363 101562394 -44026894 + AT_rich Low_complexity Low_complexity 1 31 0 1839 186 3 0 chr10 101562483 101562789 -44026499 + AluJo SINE Alu 1 307 -5 1500 170 78 14 chr10 101563396 101563678 -44025610 + AluJo SINE Alu 3 302 -10 180 0 0 0 chr10 101563854 101563874 -44025414 + (TG)n Simple_repeat Simple_repeat 2 21 0 21 0 0 0 chr10 101563874 101563895 -44025393 + AT_rich Low_complexity Low_complexity 1 21 0 451 265 0 16 chr10 101565273 101565398 -44023890 + MIR SINE MIR 66 187 -61 182 345 161 11 chr10 101565419 101565506 -44023782 - L2 LINE L2 -18 3254 3155 268 223 19 97 chr10 101566211 101566314 -44022974 + L3b LINE CR1 1347 1441 -142 5306 176 22 18 chr10 101567092 101567298 -44021990 + L1MC1 LINE L1 4552 4756 -1577 2336 97 0 0 chr10 101567298 101567596 -44021692 + AluSc SINE Alu 1 298 -11 5306 176 22 18 chr10 101567596 101568986 -44020302 + L1MC1 LINE L1 4756 6149 -184 519 113 25 0 chr10 101568993 101569073 -44020215 + L1MC1 LINE L1 6250 6331 -2 977 248 59 13 chr10 101569096 101569402 -44019886 - L1ME3A LINE L1 -84 6086 5767 25 0 0 0 chr10 101569504 101569529 -44019759 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr10 101569593 101569621 -44019667 + AT_rich Low_complexity Low_complexity 1 28 0 347 342 70 35 chr10 101570276 101570475 -44018813 + L3 LINE CR1 2 207 -1370 23 68 0 0 chr10 101570837 101570881 -44018407 + AT_rich Low_complexity Low_complexity 1 44 0 1730 154 18 28 chr10 101570883 101571168 -44018120 - AluJo SINE Alu -21 291 10 292 291 0 48 chr10 101571373 101571476 -44017812 + MER102b DNA MER1_type 232 329 -12 1325 191 4 25 chr10 101572035 101572276 -44017012 - AluJo SINE Alu -75 237 2 38 39 0 0 chr10 101572697 101572749 -44016539 + AT_rich Low_complexity Low_complexity 1 52 0 596 295 136 66 chr10 101573124 101573653 -44015635 - MLT1K LTR MaLR 0 588 23 243 245 20 71 chr10 101573717 101573815 -44015473 - MER5B DNA MER1_type -81 108 3 249 246 0 18 chr10 101573757 101573814 -44015474 + MER5A DNA MER1_type 132 187 -2 282 29 0 0 chr10 101574760 101574795 -44014493 + (TTA)n Simple_repeat Simple_repeat 3 37 0 7580 20 0 1 chr10 101574797 101575778 -44013510 - L1PA3 LINE L1 -26 6129 5149 23 54 0 0 chr10 101575955 101575992 -44013296 + AT_rich Low_complexity Low_complexity 1 37 0 1969 157 0 3 chr10 101576667 101576967 -44012321 - AluJo SINE Alu -10 302 4 263 302 178 35 chr10 101577180 101577349 -44011939 - MIR SINE MIR -18 244 52 1916 216 96 33 chr10 101577458 101577968 -44011320 + MLT1G LTR MaLR 7 548 -42 2355 110 0 0 chr10 101578166 101578476 -44010812 - AluSx SINE Alu 0 312 3 510 209 0 29 chr10 101578563 101578668 -44010620 - L2 LINE L2 -5 3308 3207 2018 156 24 3 chr10 101578668 101578996 -44010292 - MER2 DNA MER2_type -10 335 1 371 255 0 0 chr10 101579397 101579499 -44009789 - L1M4 LINE L1 -3448 3196 3095 * 5050 198 56 87 chr10 101579494 101579536 -44009752 - L1M4 LINE L1 -5145 1397 1355 2233 82 27 3 chr10 101579536 101579828 -44009460 - AluY SINE Alu -12 299 1 5050 198 56 87 chr10 101579828 101579860 -44009428 - L1M4 LINE L1 -5187 1355 1324 2038 112 0 18 chr10 101579860 101580146 -44009142 - AluSx SINE Alu -13 299 19 5050 198 56 87 chr10 101580146 101580692 -44008596 - L1M4 LINE L1 -5218 1324 763 3100 138 6 36 chr10 101580692 101581220 -44008068 - MER41E LTR ERV1 0 512 1 5050 198 56 87 chr10 101581220 101582037 -44007251 - L1M4 LINE L1 -5779 763 2 25 0 0 0 chr10 101582882 101582907 -44006381 + AT_rich Low_complexity Low_complexity 1 25 0 5961 78 24 73 chr10 101583029 101584398 -44004890 + SVA Other Other 8 868 -520 6269 60 31 51 chr10 101584415 101585379 -44003909 + SVA Other Other 433 1377 -9 25 31 0 0 chr10 101585379 101585411 -44003877 + AT_rich Low_complexity Low_complexity 1 32 0 800 108 78 0 chr10 101585794 101585923 -44003365 + MER85 DNA T2_type 1 139 0 25 51 0 0 chr10 101586223 101586262 -44003026 + AT_rich Low_complexity Low_complexity 1 39 0 249 33 0 0 chr10 101586386 101586416 -44002872 + (CA)n Simple_repeat Simple_repeat 2 31 0 2021 152 3 0 chr10 101586837 101587140 -44002148 + AluJb SINE Alu 1 304 -8 1001 125 7 0 chr10 101587893 101588037 -44001251 - AluSg/x SINE Alu -35 275 131 1450 153 123 0 chr10 101588358 101588626 -44000662 + AluJb SINE Alu 2 302 0 605 298 50 32 chr10 101588877 101589125 -44000163 + MIR SINE MIR 7 256 -6 1232 108 0 0 chr10 101589587 101589754 -43999534 + AluSg/x SINE Alu 134 300 -12 2370 90 0 0 chr10 101590545 101590846 -43998442 + AluSg SINE Alu 1 301 -9 417 224 35 149 chr10 101591058 101591259 -43998029 - MER63A DNA MER1_type -31 179 2 209 324 14 28 chr10 101591789 101591860 -43997428 + MIR SINE MIR 44 113 -95 335 303 80 40 chr10 101591917 101592092 -43997196 - HAL1 LINE L1 0 2507 2326 2009 139 0 19 chr10 101592200 101592516 -43996772 - AluSx SINE Alu -2 310 1 233 307 49 25 chr10 101592562 101592725 -43996563 - HAL1b LINE L1 -435 913 747 697 237 143 56 chr10 101593091 101593230 -43996058 - HAL1 LINE L1 -599 1908 1782 221 0 0 33 chr10 101593230 101593260 -43996028 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 697 237 143 56 chr10 101593260 101593478 -43995810 - HAL1 LINE L1 -725 1782 1520 1493 116 0 5 chr10 101593510 101593739 -43995549 + AluJb SINE Alu 86 313 0 22 0 0 0 chr10 101594732 101594754 -43994534 + AT_rich Low_complexity Low_complexity 1 22 0 271 268 12 24 chr10 101595125 101595207 -43994081 + 7SK RNA RNA 14 94 -99 28 71 0 0 chr10 101595420 101595476 -43993812 + AT_rich Low_complexity Low_complexity 1 56 0 223 305 67 76 chr10 101595833 101595938 -43993350 + MER5A DNA MER1_type 35 138 -51 587 245 40 7 chr10 101596607 101596758 -43992530 + MIR SINE MIR 106 261 -1 273 305 85 35 chr10 101597162 101597303 -43991985 + L2 LINE L2 2605 2752 -562 754 154 24 0 chr10 101597387 101597510 -43991778 + AluSq/x SINE Alu 1 126 -187 366 23 0 0 chr10 101597510 101597553 -43991735 + (CA)n Simple_repeat Simple_repeat 2 44 0 301 378 51 55 chr10 101597678 101597932 -43991356 + L2 LINE L2 3020 3272 0 1207 85 12 0 chr10 101599330 101599495 -43989793 - L1PA10 LINE L1 -3 6165 5999 2290 102 0 0 chr10 101599865 101600168 -43989120 + AluSg SINE Alu 1 303 -7 261 0 0 0 chr10 101600433 101600462 -43988826 + (TC)n Simple_repeat Simple_repeat 2 30 0 1865 106 8 0 chr10 101600764 101601020 -43988268 + AluSx SINE Alu 50 307 -5 28 48 0 0 chr10 101601386 101601428 -43987860 + AT_rich Low_complexity Low_complexity 1 42 0 30 0 0 0 chr10 101601469 101601499 -43987789 + AT_rich Low_complexity Low_complexity 1 30 0 248 175 0 16 chr10 101601586 101601649 -43987639 + (TTAA)n Simple_repeat Simple_repeat 1 62 0 198 0 0 0 chr10 101603472 101603494 -43985794 + (TAA)n Simple_repeat Simple_repeat 2 23 0 21 36 0 0 chr10 101603536 101603564 -43985724 + AT_rich Low_complexity Low_complexity 1 28 0 30 0 0 0 chr10 101603773 101603803 -43985485 + AT_rich Low_complexity Low_complexity 1 30 0 195 129 0 0 chr10 101603909 101603940 -43985348 + (TG)n Simple_repeat Simple_repeat 2 32 0 1880 81 53 0 chr10 101605082 101605328 -43983960 + AluY SINE Alu 37 295 -16 202 200 0 0 chr10 101606129 101606174 -43983114 + (TTTG)n Simple_repeat Simple_repeat 2 46 0 190 245 0 57 chr10 101607212 101607265 -43982023 - L2 LINE L2 -9 3304 3255 338 0 24 0 chr10 101607331 101607373 -43981915 + (CA)n Simple_repeat Simple_repeat 1 43 0 22 0 0 0 chr10 101607562 101607584 -43981704 + AT_rich Low_complexity Low_complexity 1 22 0 2019 140 0 0 chr10 101607591 101607869 -43981419 - AluSx SINE Alu -24 288 11 808 154 0 22 chr10 101607934 101608070 -43981218 - FLAM_C SINE Alu 0 133 1 1455 123 99 78 chr10 101608236 101608416 -43980872 + MER44D DNA MER2_type 1 176 -2315 2156 112 3 3 chr10 101608416 101608712 -43980576 - AluSx SINE Alu -16 296 1 1455 123 99 78 chr10 101608712 101608863 -43980425 + MER44D DNA MER2_type 176 609 0 314 339 88 21 chr10 101610017 101610201 -43979087 - L3 LINE CR1 -71 1506 1310 258 289 19 0 chr10 101610201 101610253 -43979035 - MER91A DNA MER1_type -1 195 143 416 358 24 48 chr10 101610289 101610454 -43978834 - MER91A DNA MER1_type -26 170 10 499 317 171 45 chr10 101610464 101611066 -43978222 - L3 LINE CR1 -267 1310 633 958 176 59 0 chr10 101611121 101611291 -43977997 + MER5A DNA MER1_type 10 189 0 487 323 109 36 chr10 101611323 101611654 -43977634 - L3 LINE CR1 -1003 574 220 385 348 67 9 chr10 101612671 101612881 -43976407 - L2 LINE L2 -568 2746 2525 184 371 45 0 chr10 101613189 101613278 -43976010 - L3b LINE CR1 -289 1294 1202 303 294 47 53 chr10 101613480 101613650 -43975638 + MIR3 SINE MIR 24 192 -16 376 213 128 0 chr10 101613721 101613815 -43975473 - L2 LINE L2 -32 3281 3176 24 32 0 0 chr10 101614152 101614183 -43975105 + AT_rich Low_complexity Low_complexity 1 31 0 1876 178 0 3 chr10 101614586 101614890 -43974398 + AluJb SINE Alu 2 304 -8 25 0 0 0 chr10 101615992 101616017 -43973271 + AT_rich Low_complexity Low_complexity 1 25 0 2279 103 0 7 chr10 101616077 101616378 -43972910 + AluSx SINE Alu 1 299 -13 2166 112 7 7 chr10 101616601 101616905 -43972383 + AluSx SINE Alu 1 304 -8 260 241 0 0 chr10 101617406 101617460 -43971828 - L2 LINE L2 0 3272 3219 1546 157 57 21 chr10 101617646 101617926 -43971362 + AluJo SINE Alu 1 290 -22 627 313 137 55 chr10 101618094 101618823 -43970465 - L2 LINE L2 -1 3271 2470 252 307 91 23 chr10 101619062 101619130 -43970158 + MIR3 SINE MIR 76 153 -55 2160 107 17 7 chr10 101619130 101619428 -43969860 + AluSx SINE Alu 1 301 -11 252 307 91 23 chr10 101619428 101619447 -43969841 + MIR3 SINE MIR 153 169 -39 1899 155 0 17 chr10 101619974 101620270 -43969018 - AluJo SINE Alu -21 291 1 1300 153 88 62 chr10 101621487 101621761 -43967527 + AluJo SINE Alu 31 311 -1 2340 104 0 3 chr10 101622032 101622341 -43966947 + AluSx SINE Alu 1 308 -4 313 299 0 0 chr10 101623579 101623666 -43965622 + T-rich Low_complexity Low_complexity 1 87 0 2119 99 0 0 chr10 101624181 101624453 -43964835 + AluY SINE Alu 23 294 -17 2355 114 59 75 chr10 101624700 101624837 -43964451 + LTR49-int LTR ERV1 3964 4102 -2229 1880 139 3 24 chr10 101624837 101625148 -43964140 - AluSx SINE Alu 0 305 1 2355 114 59 75 chr10 101625148 101625519 -43963769 + LTR49-int LTR ERV1 4102 4466 -1865 2212 109 0 13 chr10 101625519 101625823 -43963465 - AluSx SINE Alu -12 300 1 2355 114 59 75 chr10 101625823 101625874 -43963414 + LTR49-int LTR ERV1 4466 4516 -1815 24 0 0 0 chr10 101627591 101627615 -43961673 + AT_rich Low_complexity Low_complexity 1 24 0 739 138 0 0 chr10 101627710 101627826 -43961462 - AluSg/x SINE Alu -1 311 196 2476 75 0 7 chr10 101627826 101628133 -43961155 - AluSg SINE Alu -5 305 1 1619 109 0 0 chr10 101628133 101628342 -43960946 - AluJb SINE Alu -102 210 1 671 126 172 7 chr10 101628563 101628714 -43960574 - L1MB8 LINE L1 0 6178 6003 1424 179 72 0 chr10 101628743 101629006 -43960282 + AluJb SINE Alu 1 282 -30 269 26 26 0 chr10 101629011 101629049 -43960239 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1295 139 40 36 chr10 101629058 101629250 -43960038 - L1MB8 LINE L1 -276 5902 5707 2388 77 0 13 chr10 101629250 101629550 -43959738 + AluY SINE Alu 1 296 -15 1295 139 40 36 chr10 101629550 101629631 -43959657 - L1MB8 LINE L1 -471 5707 5628 1515 81 30 5 chr10 101629835 101630013 -43959275 - AluSg/x SINE Alu -10 300 115 1053 24 0 0 chr10 101630013 101630136 -43959152 - L1PA3 LINE L1 -3 6152 6030 1515 81 30 5 chr10 101630136 101630155 -43959133 - AluSg/x SINE Alu -195 115 98 292 77 0 0 chr10 101630155 101630194 -43959094 - Alu SINE Alu -263 39 1 1252 14 0 0 chr10 101630335 101630480 -43958808 - L1PA5 LINE L1 -1 6153 6009 388 308 26 133 chr10 101630582 101630639 -43958649 + L2 LINE L2 2430 2491 -823 2286 101 3 3 chr10 101630639 101630945 -43958343 - AluSg SINE Alu -4 306 1 388 308 26 133 chr10 101630945 101631047 -43958241 + L2 LINE L2 2491 2602 -712 1967 135 4 0 chr10 101631047 101631356 -43957932 - AluSx SINE Alu 0 310 1 388 308 26 133 chr10 101631356 101631616 -43957672 + L2 LINE L2 2602 2806 -508 2373 89 3 3 chr10 101631713 101632016 -43957272 + AluSq SINE Alu 1 303 -10 296 312 52 32 chr10 101632054 101632208 -43957080 + L2 LINE L2 2953 3109 -163 327 265 69 20 chr10 101632391 101632493 -43956795 + L2 LINE L2 3197 3303 -10 2171 127 3 0 chr10 101633439 101633747 -43955541 + AluSx SINE Alu 1 309 -3 2104 77 36 4 chr10 101635376 101635688 -43953600 + AluSg1 SINE Alu 1 321 0 526 163 0 0 chr10 101635864 101635950 -43953338 - MLT1A1 LTR MaLR 0 365 280 350 361 190 29 chr10 101636115 101636600 -43952688 - L2 LINE L2 -37 3235 2829 1971 143 3 0 chr10 101636600 101636894 -43952394 + AluSx SINE Alu 1 295 -17 1952 119 0 73 chr10 101636898 101637231 -43952057 + AluSx SINE Alu 2 312 0 350 361 190 29 chr10 101637231 101638034 -43951254 - L2 LINE L2 -445 2827 1734 2415 58 7 0 chr10 101638064 101638356 -43950932 + AluY SINE Alu 1 294 -17 434 318 118 29 chr10 101638528 101638868 -43950420 - L2 LINE L2 -2734 580 211 348 120 0 0 chr10 101639524 101639574 -43949714 - Alu SINE Alu -252 50 1 2181 40 47 4 chr10 101640543 101640820 -43948468 - AluY SINE Alu -3 308 20 2197 122 0 0 chr10 101640976 101641272 -43948016 + AluSq SINE Alu 1 296 -17 1686 161 50 7 chr10 101641285 101641584 -43947704 + AluJb SINE Alu 1 312 0 371 273 52 11 chr10 101642082 101642303 -43946985 + L1ME3 LINE L1 5618 5826 -336 2353 88 13 3 chr10 101642471 101642778 -43946510 - AluSp SINE Alu -3 310 1 1897 176 0 0 chr10 101642842 101643144 -43946144 - AluSx SINE Alu -10 302 1 374 216 117 0 chr10 101643146 101643257 -43946031 + L1MD3 LINE L1 7846 7969 -26 1058 274 108 22 chr10 101645438 101646110 -43943178 + L2 LINE L2 2593 3312 -1 1006 136 32 0 chr10 101646380 101646534 -43942754 - AluJo/FRAM SINE Alu -25 287 129 326 151 0 0 chr10 101646535 101646588 -43942700 - Alu SINE Alu -249 53 1 2270 103 3 3 chr10 101646904 101647214 -43942074 + AluSx SINE Alu 1 310 -2 714 110 0 148 chr10 101648352 101648507 -43940781 + AluSq/x SINE Alu 1 132 -181 2411 91 3 0 chr10 101648510 101648819 -43940469 + AluSp SINE Alu 1 310 -3 2366 261 48 24 chr10 101648837 101649346 -43939942 + L1ME3A LINE L1 4901 5396 -774 13947 128 47 5 chr10 101649346 101649861 -43939427 - Tigger1 DNA MER2_type 0 2418 1926 2402 90 3 0 chr10 101649861 101650161 -43939127 - AluSp SINE Alu -11 302 2 13947 128 47 5 chr10 101650161 101650403 -43938885 - Tigger1 DNA MER2_type -492 1926 1696 1668 140 39 39 chr10 101650403 101650689 -43938599 - AluJo SINE Alu -15 297 12 13947 128 47 5 chr10 101650689 101652250 -43937038 - Tigger1 DNA MER2_type -722 1696 1 2366 261 48 24 chr10 101652250 101652971 -43936317 + L1ME3A LINE L1 5396 6161 -9 908 307 154 23 chr10 101653258 101653776 -43935512 - L3 LINE CR1 -352 1225 640 1768 151 48 7 chr10 101653997 101654288 -43935000 + AluSx SINE Alu 1 303 -9 338 319 28 42 chr10 101654412 101654556 -43934732 - L3 LINE CR1 -988 589 448 23 33 0 0 chr10 101654853 101654883 -43934405 + AT_rich Low_complexity Low_complexity 1 30 0 1672 190 144 68 chr10 101657202 101657365 -43931923 - LTR48B LTR ERV1 0 644 495 709 165 17 0 chr10 101657365 101657511 -43931777 - FLAM_C SINE Alu 0 148 1 1672 190 144 68 chr10 101657511 101657945 -43931343 - LTR48B LTR ERV1 -149 495 1 6978 156 45 18 chr10 101658041 101658294 -43930994 - LTR48B-int LTR ERV1 -158 6173 5928 198 0 0 0 chr10 101658294 101658316 -43930972 + (TTA)n Simple_repeat Simple_repeat 3 24 0 6978 156 45 18 chr10 101658316 101659427 -43929861 - LTR48B-int LTR ERV1 -403 5928 4772 1082 113 0 0 chr10 101659429 101659570 -43929718 + AluJb SINE Alu 1 141 -171 204 111 0 0 chr10 101659588 101659624 -43929664 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 1218 109 40 10 chr10 101659634 101659835 -43929453 - LTR48B-int LTR ERV1 -1532 4799 4593 261 168 95 32 chr10 101659852 101659947 -43929341 - L1MC5 LINE L1 -30 7931 7831 260 281 125 0 chr10 101660218 101660346 -43928942 + L1ME4a LINE L1 5965 6108 -13 363 228 155 73 chr10 101660357 101660589 -43928699 - L1MC5 LINE L1 -212 7749 7499 1090 127 0 53 chr10 101660650 101660670 -43928618 - AluSc SINE Alu -4 305 285 2355 109 6 0 chr10 101660670 101660981 -43928307 - AluSq SINE Alu 0 313 1 848 117 8 0 chr10 101660986 101661114 -43928174 - L1PB3 LINE L1 -3 6151 6023 1090 127 0 53 chr10 101661114 101661276 -43928012 - AluSc SINE Alu -28 281 127 2050 141 7 0 chr10 101662225 101662516 -43926772 + AluSx SINE Alu 5 297 -15 2280 109 0 3 chr10 101662537 101662839 -43926449 + AluSx SINE Alu 2 302 -10 24 53 0 0 chr10 101664176 101664214 -43925074 + AT_rich Low_complexity Low_complexity 1 38 0 210 191 0 0 chr10 101666928 101666970 -43922318 + (CATA)n Simple_repeat Simple_repeat 3 44 0 504 252 31 8 chr10 101670826 101670953 -43918335 + L2 LINE L2 3184 3313 0 29 0 0 0 chr10 101671512 101671541 -43917747 + AT_rich Low_complexity Low_complexity 1 29 0 760 157 0 8 chr10 101671662 101671783 -43917505 - FLAM_A SINE Alu -13 120 1 1074 256 54 20 chr10 101671860 101672212 -43917076 - L1ME4a LINE L1 -248 5873 5510 308 71 0 0 chr10 101674264 101674306 -43914982 + MER57B LTR ERV1 326 367 -67 27 49 0 0 chr10 101674328 101674369 -43914919 + AT_rich Low_complexity Low_complexity 1 41 0 2280 98 7 3 chr10 101676355 101676660 -43912628 - AluSg SINE Alu -4 306 1 2113 128 0 0 chr10 101676762 101677067 -43912221 - AluSx SINE Alu 0 305 1 352 323 0 0 chr10 101677137 101677230 -43912058 - MIR SINE MIR -71 137 45 2065 249 76 44 chr10 101678321 101678722 -43910566 - L1MEc LINE L1 -4684 1712 1325 2420 81 0 3 chr10 101678722 101679020 -43910268 - AluY SINE Alu -14 297 1 2065 249 76 44 chr10 101679020 101679226 -43910062 - L1MEc LINE L1 -5071 1325 1127 2194 133 0 3 chr10 101679226 101679534 -43909754 - AluSx SINE Alu -5 307 1 2065 249 76 44 chr10 101679534 101679861 -43909427 - L1MEc LINE L1 -5269 1127 747 1308 242 3 7 chr10 101679881 101680174 -43909114 - L1MEc LINE L1 -6066 330 39 2928 168 78 25 chr10 101680183 101680535 -43908753 - L1MB5 LINE L1 0 6174 5775 3314 119 81 35 chr10 101680535 101680875 -43908413 - LTR49 LTR ERV1 0 595 217 2229 93 33 0 chr10 101680875 101681175 -43908113 - AluSp SINE Alu -3 310 1 3314 119 81 35 chr10 101681175 101681403 -43907885 - LTR49 LTR ERV1 -378 217 1 2928 168 78 25 chr10 101681403 101681653 -43907635 - L1MB5 LINE L1 -399 5775 5540 448 273 0 37 chr10 101681656 101681681 -43907607 - L1MA10 LINE L1 0 6334 6310 1682 232 64 9 chr10 101681681 101682116 -43907172 - L1ME2 LINE L1 -12 6221 5763 242 275 12 0 chr10 101682112 101682192 -43907096 - L1ME2 LINE L1 -4010 2386 2306 * 1242 100 12 18 chr10 101682192 101682362 -43906926 - AluJb SINE Alu -143 169 1 247 256 12 24 chr10 101682408 101682490 -43906798 + HSMAR1 DNA Mariner 1207 1287 0 380 270 28 97 chr10 101682490 101682575 -43906713 - L1ME2 LINE L1 -4172 2224 2135 2234 128 0 0 chr10 101682575 101682872 -43906416 - AluSx SINE Alu -15 297 1 380 270 28 97 chr10 101682872 101682914 -43906374 - L1ME2 LINE L1 -4261 2135 2092 1753 142 42 42 chr10 101682914 101683225 -43906063 - AluSx SINE Alu -1 311 1 2352 116 0 0 chr10 101683227 101683538 -43905750 - AluSq SINE Alu -2 311 1 380 270 28 97 chr10 101683538 101683654 -43905634 - L1ME2 LINE L1 -4305 2091 1994 266 122 0 0 chr10 101685101 101685142 -43904146 - MIR SINE MIR -6 256 216 438 236 55 0 chr10 101685884 101685994 -43903294 + MER63A DNA MER1_type 95 210 0 352 277 161 0 chr10 101686619 101686749 -43902539 - MER117 DNA MER1_type -1 196 46 369 150 17 0 chr10 101686789 101686849 -43902439 + LTR50 LTR ERVL 21 81 -714 222 37 0 0 chr10 101686885 101686912 -43902376 + (GGA)n Simple_repeat Simple_repeat 3 29 0 330 338 90 38 chr10 101687443 101687733 -43901555 + L3 LINE CR1 1250 1554 -23 2352 100 0 0 chr10 101688733 101689042 -43900246 - AluSc SINE Alu 0 309 1 192 309 95 0 chr10 101689276 101689360 -43899928 - MIR3 SINE MIR -9 199 108 865 172 118 0 chr10 101689752 101689921 -43899367 - MER5A DNA MER1_type 0 189 1 663 261 49 106 chr10 101689946 101690295 -43898993 - MER102a DNA MER1_type 0 330 2 2168 208 65 5 chr10 101690338 101690570 -43898718 - MLT1F LTR MaLR -103 439 222 180 0 0 0 chr10 101690570 101690590 -43898698 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 2168 208 65 5 chr10 101690590 101690771 -43898517 - MLT1F LTR MaLR -320 222 1 1297 192 42 63 chr10 101690775 101691089 -43898199 - AluJo SINE Alu 0 308 1 2074 112 0 7 chr10 101691102 101691411 -43897877 - AluSx SINE Alu 0 307 1 265 269 64 0 chr10 101691657 101691735 -43897553 + MER102b DNA MER1_type 250 332 -9 523 193 0 0 chr10 101691750 101691838 -43897450 + MER81 DNA DNA 1 88 -26 518 209 176 7 chr10 101691882 101692030 -43897258 + MER5A DNA MER1_type 10 182 -7 271 346 26 13 chr10 101692347 101692500 -43896788 - L1MC/D LINE L1 -2059 5749 5595 521 272 158 18 chr10 101693250 101693478 -43895810 - MIR SINE MIR -2 260 1 1917 141 3 18 chr10 101693546 101693830 -43895458 - AluSx SINE Alu -32 280 1 627 253 188 0 chr10 101693843 101694029 -43895259 - MIR SINE MIR -14 248 28 25 31 0 0 chr10 101694637 101694669 -43894619 + AT_rich Low_complexity Low_complexity 1 32 0 2490 88 7 0 chr10 101695406 101695714 -43893574 + AluSg SINE Alu 1 310 0 2387 97 0 0 chr10 101696456 101696756 -43892532 - AluSx SINE Alu -7 305 6 1518 204 61 39 chr10 101696801 101697164 -43892124 - MLT1A2 LTR MaLR -3 371 1 212 159 116 0 chr10 101697265 101697334 -43891954 - MIR SINE MIR -67 141 65 2318 104 3 0 chr10 101697756 101698053 -43891235 + AluSx SINE Alu 3 300 -12 2169 106 3 0 chr10 101698071 101698380 -43890908 + AluSx SINE Alu 1 310 0 52 30 0 0 chr10 101698426 101698492 -43890796 + AT_rich Low_complexity Low_complexity 1 66 0 1923 126 0 46 chr10 101698656 101698941 -43890347 - AluJb SINE Alu -39 273 2 380 141 0 14 chr10 101699378 101699449 -43889839 + (TTCC)n Simple_repeat Simple_repeat 4 73 0 1843 154 10 0 chr10 101699456 101699749 -43889539 - AluSx SINE Alu -16 296 1 324 164 33 0 chr10 101699751 101699810 -43889478 - FAM SINE Alu -10 165 105 1648 72 5 0 chr10 101699810 101700017 -43889271 - THE1B LTR MaLR 0 364 157 2236 85 4 4 chr10 101700018 101700299 -43888989 + AluSq SINE Alu 1 281 -32 324 0 0 0 chr10 101700299 101700335 -43888953 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 538 253 13 53 chr10 101700355 101700580 -43888708 + L2 LINE L2 3098 3313 0 1274 253 8 4 chr10 101700665 101700930 -43888358 + MLT1E3 LTR MaLR 295 560 -64 1208 147 32 0 chr10 101700930 101701146 -43888142 - AluSc SINE Alu 0 304 83 1154 121 0 0 chr10 101701168 101701317 -43887971 - AluSg1 SINE Alu -159 150 2 286 222 63 0 chr10 101701317 101701380 -43887908 + MLT1E3 LTR MaLR 527 593 0 235 289 121 0 chr10 101701383 101701466 -43887822 - L2 LINE L2 -13 3259 3167 452 274 61 35 chr10 101701494 101701691 -43887597 + MIR SINE MIR 4 205 -57 469 214 0 10 chr10 101702314 101702417 -43886871 + L1ME4a LINE L1 5540 5641 -480 364 283 69 0 chr10 101702421 101702566 -43886722 + L1ME4a LINE L1 5672 5826 -295 809 291 16 16 chr10 101702619 101702863 -43886425 + MIR SINE MIR 19 262 0 2274 113 0 0 chr10 101702879 101703180 -43886108 - AluSx SINE Alu -11 301 1 294 263 61 18 chr10 101703251 101703365 -43885923 + L1ME4a LINE L1 6002 6120 -1 2337 96 3 0 chr10 101704299 101704591 -43884697 + AluSx SINE Alu 1 293 -19 10942 209 59 35 chr10 101704622 101705240 -43884048 - L1ME1 LINE L1 -5 6230 5629 1568 194 3 10 chr10 101705240 101705551 -43883737 - AluJb SINE Alu 0 309 1 10942 209 59 35 chr10 101705551 101706078 -43883210 - L1ME1 LINE L1 -606 5629 5116 2146 128 0 0 chr10 101706078 101706376 -43882912 - AluSx SINE Alu -14 298 1 10942 209 59 35 chr10 101706376 101707522 -43881766 - L1ME1 LINE L1 -1119 5116 4000 1421 188 80 7 chr10 101707522 101707798 -43881490 - AluJo SINE Alu -14 298 3 2009 150 0 16 chr10 101707800 101707815 -43881473 - AluSx SINE Alu -10 302 288 363 44 0 0 chr10 101707815 101707860 -43881428 + (ATG)n Simple_repeat Simple_repeat 1 45 0 2009 150 0 16 chr10 101707860 101708151 -43881137 - AluSx SINE Alu -24 288 1 1628 173 13 30 chr10 101708151 101708452 -43880836 - AluJo SINE Alu -16 296 1 10942 209 59 35 chr10 101708452 101708779 -43880509 - L1ME1 LINE L1 -2235 4000 3682 2505 84 0 0 chr10 101708779 101709088 -43880200 - AluY SINE Alu -2 309 1 10942 209 59 35 chr10 101709088 101709333 -43879955 - L1ME1 LINE L1 -2553 3682 3444 2328 92 3 7 chr10 101709333 101709637 -43879651 - AluSx SINE Alu -9 303 1 10942 209 59 35 chr10 101709637 101710847 -43878441 - L1ME1 LINE L1 -2791 3444 2077 490 182 15 45 chr10 101710849 101710968 -43878320 - L1ME1 LINE L1 -4355 2041 1925 357 24 0 0 chr10 101710968 101711010 -43878278 + (TA)n Simple_repeat Simple_repeat 1 42 0 490 182 15 45 chr10 101711010 101711022 -43878266 - L1ME1 LINE L1 -4471 1925 1914 306 277 139 0 chr10 101711664 101711801 -43877487 - L1ME1 LINE L1 -4528 1868 1713 2365 99 0 13 chr10 101711918 101712232 -43877056 + AluSg SINE Alu 1 310 0 1677 120 8 4 chr10 101712469 101712703 -43876585 + AluSx SINE Alu 60 294 -18 2448 89 0 13 chr10 101713359 101713673 -43875615 - AluSq SINE Alu -3 310 1 720 172 0 22 chr10 101715065 101715199 -43874089 + FLAM_C SINE Alu 2 132 -1 342 252 118 8 chr10 101715373 101715500 -43873788 + MIR3 SINE MIR 40 180 -28 689 230 234 8 chr10 101715798 101716190 -43873098 - LTR50 LTR ERVL -6 789 216 360 0 0 0 chr10 101716315 101716355 -43872933 + (CA)n Simple_repeat Simple_repeat 1 40 0 497 204 44 9 chr10 101718672 101718785 -43870503 - MIR SINE MIR -71 191 75 299 154 39 0 chr10 101718785 101718837 -43870451 + MIR3 SINE MIR 113 166 -42 310 304 47 27 chr10 101718915 101719063 -43870225 - MIR SINE MIR -66 196 46 907 274 128 69 chr10 101719619 101719845 -43869443 - L1MEd LINE L1 -4102 2208 1997 1773 204 61 9 chr10 101719845 101720188 -43869100 - MLT1A1 LTR MaLR -4 361 1 907 274 128 69 chr10 101720188 101720700 -43868588 - L1MEd LINE L1 -4313 1997 1517 2144 142 0 0 chr10 101720700 101721011 -43868277 - AluJb SINE Alu -1 311 1 907 274 128 69 chr10 101721011 101721040 -43868248 - L1MEd LINE L1 -4793 1517 1491 1905 167 122 0 chr10 101721040 101721393 -43867895 + MSTD LTR MaLR 1 396 0 2288 92 41 0 chr10 101721400 101721695 -43867593 - AluSq SINE Alu -6 307 1 907 274 128 69 chr10 101721695 101722460 -43866828 - L1MEd LINE L1 -4824 1486 547 2289 75 3 0 chr10 101723095 101723415 -43865873 + AluY SINE Alu 1 321 0 339 233 0 0 chr10 101723429 101723502 -43865786 - MIR SINE MIR -78 184 112 2119 100 32 0 chr10 101723528 101723809 -43865479 + AluSp SINE Alu 1 290 -23 2004 127 0 0 chr10 101723813 101724081 -43865207 + AluSx SINE Alu 1 268 -44 2565 137 29 9 chr10 101724229 101724254 -43865034 - L1MB3 LINE L1 -2 6181 6158 1873 153 143 16 chr10 101724254 101724633 -43864655 + MSTA LTR MaLR 2 428 0 2565 137 29 9 chr10 101724633 101724954 -43864334 - L1MB3 LINE L1 -25 6158 5822 2163 131 7 0 chr10 101724954 101725259 -43864029 - AluSx SINE Alu -5 307 1 2565 137 29 9 chr10 101725259 101725357 -43863931 - L1MB3 LINE L1 -361 5822 5727 225 94 0 0 chr10 101725401 101725433 -43863855 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 467 325 52 37 chr10 101725451 101725722 -43863566 - L2 LINE L2 -49 3264 2990 895 203 33 52 chr10 101725723 101725935 -43863353 + AluJo SINE Alu 3 210 -102 1123 183 154 97 chr10 101726126 101726509 -43862779 + LTR16C LTR ERVL 79 483 -8 834 293 39 50 chr10 101726626 101727084 -43862204 + L1ME LINE L1 377 829 -5543 6165 85 28 20 chr10 101727331 101728553 -43860735 + L1PA13 LINE L1 4932 6163 0 588 218 110 72 chr10 101728556 101728946 -43860342 + L1ME LINE L1 878 1282 -5090 1655 158 7 41 chr10 101728946 101729263 -43860025 + AluJo SINE Alu 1 307 0 1335 82 0 27 chr10 101729263 101729447 -43859841 + AluSq SINE Alu 134 312 -1 307 289 30 56 chr10 101729455 101729718 -43859570 + L1ME LINE L1 1166 1420 -4860 1745 214 105 35 chr10 101729718 101730489 -43858799 + L1ME LINE L1 2195 2968 -3414 1921 147 0 4 chr10 101730839 101731118 -43858170 - AluJo SINE Alu -30 282 5 391 292 47 41 chr10 101731827 101731998 -43857290 - MIR SINE MIR -26 236 65 1024 180 15 10 chr10 101732524 101732724 -43856564 - L1MC1 LINE L1 -11 6322 6122 197 283 50 0 chr10 101732725 101732785 -43856503 + L2 LINE L2 2688 2750 -564 198 302 32 0 chr10 101732882 101732945 -43856343 + L2 LINE L2 2910 2974 -298 2424 97 39 28 chr10 101733149 101733509 -43855779 - THE1B LTR MaLR 0 364 1 2590 126 54 5 chr10 101733545 101733951 -43855337 - MSTB LTR MaLR 0 426 1 2487 158 23 30 chr10 101734200 101734268 -43855020 - MSTB LTR MaLR 0 426 359 2216 119 7 0 chr10 101734268 101734562 -43854726 - AluSx SINE Alu -16 296 1 2487 158 23 30 chr10 101734562 101734922 -43854366 - MSTB LTR MaLR -67 359 1 1405 102 0 35 chr10 101735367 101735564 -43853724 - AluSg/x SINE Alu -19 293 104 762 108 18 0 chr10 101735564 101735675 -43853613 - AluSq/x SINE Alu -176 136 24 2360 112 0 0 chr10 101735849 101736161 -43853127 - AluSx SINE Alu 0 312 1 224 332 136 5 chr10 101736371 101736585 -43852703 + L2 LINE L2 1774 2015 -1299 385 298 61 15 chr10 101736792 101736990 -43852298 - L1M4 LINE L1 -1978 4168 3962 459 35 0 0 chr10 101737026 101737083 -43852205 + (TG)n Simple_repeat Simple_repeat 1 57 0 4242 197 66 2 chr10 101737092 101738238 -43851050 - L1MB5 LINE L1 -11 6163 4951 731 167 50 0 chr10 101738241 101738361 -43850927 - FLAM_C SINE Alu -16 127 2 572 217 29 14 chr10 101738363 101738501 -43850787 - L1MB5 LINE L1 -1191 4955 4816 1736 188 18 83 chr10 101738501 101738592 -43850696 + MLT1A2 LTR MaLR 2 97 -277 1882 170 96 8 chr10 101738592 101738956 -43850332 - MSTD LTR MaLR 0 396 1 1736 188 18 83 chr10 101738956 101739263 -43850025 + MLT1A2 LTR MaLR 97 374 0 1995 215 2 2 chr10 101739265 101739688 -43849600 - L1MB5 LINE L1 -1327 4819 4397 494 265 52 19 chr10 101739673 101739884 -43849404 - L1M4 LINE L1 -2168 3978 3761 * 294 317 41 24 chr10 101739930 101740053 -43849235 + MLT1J LTR MaLR 93 217 -294 431 232 221 32 chr10 101740355 101740570 -43848718 + MIR SINE MIR 2 238 -24 506 273 53 18 chr10 101741508 101741735 -43847553 + LTR16C LTR ERVL 242 476 -15 2342 171 112 4 chr10 101742317 101742773 -43846515 + MLT1D LTR MaLR 1 505 0 2196 123 0 3 chr10 101742820 101743121 -43846167 - AluSx SINE Alu -12 300 1 715 268 216 35 chr10 101743202 101743720 -43845568 + MLT1L LTR MaLR 2 613 -2 545 242 102 6 chr10 101745877 101746034 -43843254 + MIR SINE MIR 2 173 -89 351 0 0 0 chr10 101746632 101746671 -43842617 + (TG)n Simple_repeat Simple_repeat 2 40 0 290 180 0 0 chr10 101746812 101746862 -43842426 - MIR SINE MIR 0 262 213 2378 107 0 0 chr10 101746894 101747202 -43842086 - AluSq SINE Alu 0 313 6 3251 164 40 35 chr10 101747607 101748237 -43841051 - LTR27 LTR ERV1 0 636 4 298 327 9 0 chr10 101748910 101749023 -43840265 - MIR SINE MIR -75 187 74 224 254 51 17 chr10 101750034 101750093 -43839195 + L2 LINE L2 3252 3312 -1 300 27 0 0 chr10 101750551 101750588 -43838700 + (CA)n Simple_repeat Simple_repeat 2 38 0 2707 51 0 0 chr10 101750596 101750907 -43838381 - AluY SINE Alu 0 311 1 200 350 120 0 chr10 101751057 101751157 -43838131 - L2 LINE L2 -12 3260 3149 770 235 41 5 chr10 101751327 101751523 -43837765 - MIR SINE MIR -12 250 48 2035 136 7 0 chr10 101751885 101752179 -43837109 + AluSq SINE Alu 1 296 -17 215 261 14 14 chr10 101752553 101752622 -43836666 - L2 LINE L2 -871 2443 2375 23 0 0 0 chr10 101752829 101752852 -43836436 + AT_rich Low_complexity Low_complexity 1 23 0 207 267 193 37 chr10 101753005 101753140 -43836148 - MIR SINE MIR -87 175 20 1955 154 0 16 chr10 101753436 101753748 -43835540 + AluJo SINE Alu 1 307 -5 2095 109 7 0 chr10 101754966 101755273 -43834015 + AluSx SINE Alu 2 310 0 820 164 0 0 chr10 101756078 101756200 -43833088 + FLAM_C SINE Alu 3 124 -19 29 0 0 0 chr10 101756201 101756230 -43833058 + AT_rich Low_complexity Low_complexity 1 29 0 255 280 49 28 chr10 101756232 101756375 -43832913 + L1ME LINE L1 5639 5784 -337 328 62 36 232 chr10 101756696 101756770 -43832518 + MER53 DNA DNA 100 187 -2 1639 179 7 7 chr10 101756770 101757049 -43832239 + AluJo SINE Alu 26 304 -8 2504 69 0 0 chr10 101757051 101757340 -43831948 + AluSc SINE Alu 1 289 -20 328 62 36 232 chr10 101757340 101757374 -43831914 + MER53 DNA DNA 188 189 0 443 255 114 5 chr10 101758379 101758563 -43830725 + L1ME4a LINE L1 5708 5911 -210 235 266 113 16 chr10 101758565 101758689 -43830599 + L1ME4a LINE L1 5983 6118 -3 26 30 0 0 chr10 101758842 101758875 -43830413 + AT_rich Low_complexity Low_complexity 1 33 0 1947 128 44 10 chr10 101758955 101759253 -43830035 + AluSx SINE Alu 1 308 -4 416 188 35 0 chr10 101760960 101761045 -43828243 - MIR SINE MIR -126 136 49 200 308 0 0 chr10 101761323 101761388 -43827900 + MIR SINE MIR 51 115 -147 532 246 22 22 chr10 101761395 101761529 -43827759 - MER94 DNA DNA 0 134 1 1002 284 72 27 chr10 101761552 101762031 -43827257 + MLT1K LTR MaLR 34 584 -4 2296 91 17 3 chr10 101762611 101762908 -43826380 - AluSq SINE Alu -10 303 3 25 51 0 0 chr10 101762987 101763026 -43826262 + AT_rich Low_complexity Low_complexity 1 39 0 913 234 106 58 chr10 101763148 101763666 -43825622 + L1MC5 LINE L1 7368 7910 -51 2264 93 43 0 chr10 101763724 101764024 -43825264 - AluSp SINE Alu 0 313 1 245 176 59 0 chr10 101764036 101764087 -43825201 + MIR SINE MIR 31 84 -178 1722 163 137 38 chr10 101764099 101764328 -43824960 - LTR2B LTR ERV1 -1 489 284 231 36 0 0 chr10 101764328 101764356 -43824932 + (CAGAA)n Simple_repeat Simple_repeat 1 28 0 1722 163 137 38 chr10 101764356 101764543 -43824745 - LTR2B LTR ERV1 -206 284 32 318 287 124 0 chr10 101764577 101764706 -43824582 + MIR SINE MIR 118 262 0 1818 177 0 0 chr10 101764776 101765070 -43824218 + AluJb SINE Alu 1 294 -18 477 283 26 40 chr10 101766763 101766832 -43822456 + MIR SINE MIR 47 115 -147 2789 135 12 5 chr10 101766832 101767255 -43822033 + MSTB LTR MaLR 1 426 0 477 283 26 40 chr10 101767255 101767337 -43821951 + MIR SINE MIR 115 196 -66 218 261 0 0 chr10 101767387 101767433 -43821855 + L2 LINE L2 3211 3256 -16 410 245 168 52 chr10 101767767 101767940 -43821348 - L1ME4a LINE L1 0 6121 5969 2126 144 3 0 chr10 101767940 101768238 -43821050 + AluSx SINE Alu 1 299 -13 410 245 168 52 chr10 101768238 101768374 -43820914 - L1ME4a LINE L1 -152 5969 5776 442 286 35 25 chr10 101768398 101768597 -43820691 - L1ME4a LINE L1 -399 5722 5522 1998 157 3 0 chr10 101768807 101769101 -43820187 - AluJo SINE Alu -17 295 1 407 315 46 0 chr10 101769271 101769401 -43819887 + L2 LINE L2 3137 3272 0 1057 105 0 0 chr10 101769466 101769599 -43819689 - AluSc SINE Alu -80 229 97 723 285 19 0 chr10 101770050 101770264 -43819024 + MIR SINE MIR 35 252 -10 423 328 101 54 chr10 101770383 101771124 -43818164 - L2 LINE L2 -2 3270 2488 314 96 0 19 chr10 101771805 101771857 -43817431 + (CA)n Simple_repeat Simple_repeat 2 52 0 1345 132 0 0 chr10 101772388 101772578 -43816710 - AluSg/x SINE Alu -2 310 121 844 213 151 13 chr10 101772726 101772951 -43816337 + MSTD LTR MaLR 1 256 -140 322 301 68 0 chr10 101773309 101773465 -43815823 - MIR SINE MIR -58 204 39 2480 90 3 0 chr10 101773755 101774067 -43815221 - AluSp SINE Alu 0 313 1 2376 104 3 0 chr10 101774069 101774377 -43814911 - AluSp SINE Alu -4 309 1 268 302 88 98 chr10 101775729 101776047 -43813241 - L2 LINE L2 -39 3233 2919 200 254 134 0 chr10 101776672 101776739 -43812549 - MIR SINE MIR -76 186 111 2238 102 3 0 chr10 101776765 101777049 -43812239 + AluSx SINE Alu 1 285 -27 188 45 0 0 chr10 101777320 101777342 -43811946 + (T)n Simple_repeat Simple_repeat 1 22 0 253 325 89 13 chr10 101778916 101779073 -43810215 + MIR SINE MIR 82 250 -12 864 253 135 91 chr10 101779369 101779894 -43809394 - LTR67 LTR ERVL -8 549 2 1710 131 27 4 chr10 101780388 101780647 -43808641 + AluSx SINE Alu 42 306 -6 570 202 96 34 chr10 101780673 101780851 -43808437 + L1ME4a LINE L1 5543 5731 -390 6365 87 18 0 chr10 101780861 101782366 -43806922 - L1PA13 LINE L1 -1 6162 4630 2281 120 3 0 chr10 101782383 101782691 -43806597 - AluSx SINE Alu -2 310 2 842 93 0 0 chr10 101783268 101783386 -43805902 - L1PA13 LINE L1 -1797 4349 4232 360 238 48 54 chr10 101783567 101783735 -43805553 + L1ME4a LINE L1 5955 6121 0 373 183 140 21 chr10 101784404 101784497 -43804791 - L2 LINE L2 -15 3298 3195 1741 194 0 10 chr10 101784658 101784967 -43804321 + AluJo SINE Alu 1 306 -6 817 261 165 37 chr10 101785628 101786065 -43803223 - LTR33 LTR ERVL -8 513 21 227 229 21 0 chr10 101786277 101786325 -43802963 - L2 LINE L2 -1 3271 3223 369 200 283 7 chr10 101786723 101786868 -43802420 + MER112 DNA MER1_type 1 185 -75 759 142 0 0 chr10 101786878 101786991 -43802297 + FLAM_C SINE Alu 11 123 -20 288 315 0 0 chr10 101786998 101787087 -43802201 + MER112 DNA MER1_type 170 258 -2 267 296 51 0 chr10 101787669 101787767 -43801521 - MIR SINE MIR -104 158 56 2288 107 3 3 chr10 101788494 101788802 -43800486 + AluSp SINE Alu 1 308 -5 1412 191 10 3 chr10 101791034 101791460 -43797828 + MLT1C LTR MaLR 1 461 -6 1156 130 85 0 chr10 101792037 101792237 -43797051 - MER20 DNA MER1_type -2 217 1 282 200 145 62 chr10 101792375 101792520 -43796768 + L1ME4a LINE L1 5964 6120 -1 431 221 41 8 chr10 101793031 101793153 -43796135 - MIR SINE MIR -79 183 58 281 213 50 25 chr10 101793151 101793231 -43796057 - MIR3 SINE MIR -45 163 82 * 402 363 0 14 chr10 101793334 101793480 -43795808 + MIR SINE MIR 6 149 -113 2411 201 99 84 chr10 101793716 101794583 -43794705 - L1MC5 LINE L1 -1 7960 7107 1736 137 8 0 chr10 101794583 101794838 -43794450 - AluJb SINE Alu -3 309 53 2411 201 99 84 chr10 101794838 101794921 -43794367 - L1MC5 LINE L1 -854 7107 7027 185 0 0 39 chr10 101794921 101794947 -43794341 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2411 201 99 84 chr10 101794947 101795050 -43794238 - L1MC5 LINE L1 -934 7027 6891 560 256 111 55 chr10 101795051 101795779 -43793509 - L1 LINE L1 -2521 3625 2857 187 70 23 47 chr10 101795833 101795876 -43793412 + (TTTTTG)n Simple_repeat Simple_repeat 6 47 0 249 248 159 0 chr10 101795990 101796103 -43793185 - L1 LINE L1 -3294 2852 2722 292 271 67 43 chr10 101796282 101796611 -43792677 - L1 LINE L1 -3680 2466 2130 272 230 296 7 chr10 101797666 101797801 -43791487 + MIR SINE MIR 23 196 -66 885 177 55 0 chr10 101797805 101797969 -43791319 + MER5A DNA MER1_type 17 189 0 369 238 82 54 chr10 101798047 101798194 -43791094 - MIR3 SINE MIR -39 169 19 261 289 54 48 chr10 101798226 101798392 -43790896 - L1ME4a LINE L1 -22 6099 5933 559 232 106 14 chr10 101798501 101798708 -43790580 - HAL1 LINE L1 -34 2473 2248 275 291 209 0 chr10 101798752 101798900 -43790388 - MIR SINE MIR -2 260 82 1261 87 0 0 chr10 101798959 101799151 -43790137 - AluSp SINE Alu 0 326 135 369 0 0 0 chr10 101800184 101800225 -43789063 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 2437 204 50 35 chr10 101800236 101800660 -43788628 - MLT1F1 LTR MaLR -15 552 117 2539 77 0 0 chr10 101800660 101800970 -43788318 - AluSq SINE Alu -3 310 1 2437 204 50 35 chr10 101800970 101801089 -43788199 - MLT1F1 LTR MaLR -450 117 1 372 297 21 21 chr10 101801163 101801308 -43787980 + MER117 DNA MER1_type 1 145 -52 512 255 124 0 chr10 101801506 101801651 -43787637 + MLT1J LTR MaLR 35 197 -314 400 243 33 44 chr10 101801676 101801847 -43787441 + MLT1J LTR MaLR 258 460 -21 303 253 42 0 chr10 101802004 101802099 -43787189 + MIR SINE MIR 151 249 -13 230 255 39 0 chr10 101802815 101802866 -43786422 - L2 LINE L2 -92 3180 3128 351 0 0 0 chr10 101803651 101803690 -43785598 + (A)n Simple_repeat Simple_repeat 1 39 0 1267 184 42 81 chr10 101804426 101804735 -43784553 - AluJo SINE Alu -15 297 1 2336 207 4 2 chr10 101804735 101805228 -43784060 - L1P LINE L1 -817 5329 4836 402 111 0 0 chr10 101805229 101805283 -43784005 - MSTC LTR MaLR -374 54 1 247 309 55 9 chr10 101805285 101805395 -43783893 - L2 LINE L2 0 3313 3199 953 170 130 0 chr10 101805559 101805782 -43783506 - L1MC4 LINE L1 0 8042 7791 2083 133 39 51 chr10 101805834 101806014 -43783274 + MLT1B LTR MaLR 1 182 -208 2327 124 0 0 chr10 101806014 101806321 -43782967 + AluSx SINE Alu 1 307 -5 2083 133 39 51 chr10 101806321 101806530 -43782758 + MLT1B LTR MaLR 182 385 -5 492 244 65 91 chr10 101806550 101806825 -43782463 - L1MC4 LINE L1 -316 7726 7459 210 277 84 0 chr10 101807173 101807256 -43782032 - MIR SINE MIR -87 121 32 875 103 9 0 chr10 101807390 101807506 -43781782 + AluSq/x SINE Alu 1 117 -195 224 0 65 0 chr10 101807513 101807544 -43781744 + (TAAAA)n Simple_repeat Simple_repeat 2 34 0 203 284 105 21 chr10 101807737 101807832 -43781456 - MIR SINE MIR -63 145 43 220 189 27 27 chr10 101808892 101808966 -43780322 + GA-rich Low_complexity Low_complexity 2 75 0 244 291 39 19 chr10 101809833 101809936 -43779352 + MIR3 SINE MIR 98 202 -6 1923 126 7 93 chr10 101809947 101810037 -43779251 - Charlie5 DNA MER1_type 0 2624 2528 1894 82 37 4 chr10 101810037 101810280 -43779008 + AluSg SINE Alu 54 304 -6 1923 126 7 93 chr10 101810280 101810382 -43778906 - Charlie5 DNA MER1_type -96 2528 2419 2183 88 7 14 chr10 101810382 101810679 -43778609 - AluSq SINE Alu -18 295 1 1923 126 7 93 chr10 101810679 101810913 -43778375 - Charlie5 DNA MER1_type -205 2419 2234 1297 173 21 0 chr10 101810925 101811168 -43778120 - L1MA5 LINE L1 -5 6295 6048 230 268 9 80 chr10 101811181 101811293 -43777995 - MER3 DNA MER1_type -55 154 51 871 142 15 0 chr10 101811958 101812092 -43777196 - AluJo SINE Alu -176 136 1 201 338 104 13 chr10 101812135 101812212 -43777076 - MIR SINE MIR -155 107 24 2263 106 3 0 chr10 101812234 101812537 -43776751 - AluSp SINE Alu -9 304 1 498 286 58 19 chr10 101812573 101812779 -43776509 - MIR SINE MIR 0 262 49 1592 220 37 77 chr10 101812989 101813362 -43775926 - MLT1C LTR MaLR 0 467 116 2159 114 3 3 chr10 101813362 101813660 -43775628 - AluSx SINE Alu -14 298 1 1592 220 37 77 chr10 101813660 101813767 -43775521 - MLT1C LTR MaLR -351 116 6 844 325 18 7 chr10 101813772 101814046 -43775242 + LTR16C LTR ERVL 185 461 -30 201 39 0 0 chr10 101814197 101814223 -43775065 + (GAA)n Simple_repeat Simple_repeat 1 26 0 2262 82 6 13 chr10 101815308 101815623 -43773665 + AluSp SINE Alu 1 313 0 402 79 0 0 chr10 101816075 101816138 -43773150 + (TATG)n Simple_repeat Simple_repeat 2 64 0 983 164 12 0 chr10 101816250 101816415 -43772873 + MSTC LTR MaLR 262 428 0 202 309 0 15 chr10 101817085 101817153 -43772135 + MIR3 SINE MIR 90 156 -52 294 312 145 22 chr10 101817419 101817557 -43771731 + MER91A DNA MER1_type 35 189 -7 416 274 147 39 chr10 101817729 101818168 -43771120 + L2 LINE L2 2577 3261 -52 263 273 47 109 chr10 101818246 101818374 -43770914 - MIR SINE MIR -59 149 30 305 243 0 40 chr10 101818668 101818742 -43770546 - HAL1 LINE L1 -5 2502 2432 651 210 0 0 chr10 101818748 101818867 -43770421 + FLAM_C SINE Alu 2 120 -23 216 0 0 0 chr10 101818872 101818896 -43770392 + (CAAT)n Simple_repeat Simple_repeat 4 27 0 437 267 37 77 chr10 101818907 101819207 -43770081 - HAL1 LINE L1 -378 2129 1842 259 94 19 19 chr10 101820557 101820598 -43768690 + (TC)n Simple_repeat Simple_repeat 2 45 -9 2073 108 7 0 chr10 101820598 101820893 -43768395 - AluY SINE Alu -14 297 1 259 94 19 19 chr10 101820893 101820904 -43768384 + (TC)n Simple_repeat Simple_repeat 44 54 0 1825 152 0 0 chr10 101821001 101821311 -43767977 + AluSg SINE Alu 1 310 0 2486 186 151 61 chr10 101821407 101822296 -43766992 - LTR28 LTR ERV1 0 1020 2 3150 231 116 64 chr10 101822478 101824142 -43765146 + L1MC4 LINE L1 6224 7982 -60 2105 111 0 3 chr10 101824147 101824436 -43764852 + AluSx SINE Alu 1 288 -24 236 185 0 0 chr10 101824436 101824490 -43764798 + (TA)n Simple_repeat Simple_repeat 1 54 0 3084 99 30 7 chr10 101824596 101825030 -43764258 - MLT2A1 LTR ERVL 0 444 1 45709 63 11 9 chr10 101825030 101830629 -43758659 - HERVL-A1 LTR ERVL 0 5654 42 2177 118 3 0 chr10 101830629 101830933 -43758355 + AluSq SINE Alu 1 305 -8 45709 63 11 9 chr10 101830933 101830976 -43758312 - HERVL-A1 LTR ERVL -5612 42 1 2808 86 35 20 chr10 101830976 101831442 -43757846 - MLT2A1 LTR ERVL 0 453 1 607 285 9 9 chr10 101831786 101831962 -43757326 - MER5A DNA MER1_type 0 189 3 200 340 0 66 chr10 101832408 101832514 -43756774 - MIR3 SINE MIR 0 208 110 2244 90 3 3 chr10 101832968 101833268 -43756020 + AluSp SINE Alu 1 300 -13 328 194 0 32 chr10 101833296 101833358 -43755930 - L2 LINE L2 -36 3277 3218 2211 86 7 3 chr10 101833542 101833844 -43755444 + AluSq SINE Alu 1 303 -10 2099 102 3 7 chr10 101834621 101834915 -43754373 - AluSg SINE Alu -17 293 1 2102 115 0 10 chr10 101835153 101835458 -43753830 - AluSq SINE Alu -11 302 1 2012 151 0 0 chr10 101835562 101835874 -43753414 - AluSx SINE Alu 0 312 1 311 204 102 34 chr10 101836413 101836501 -43752787 + MIR SINE MIR 114 207 -55 336 348 17 0 chr10 101837005 101837123 -43752165 - MER103 DNA DNA -45 121 2 553 292 24 12 chr10 101837265 101837433 -43751855 + L3 LINE CR1 1213 1382 -195 803 291 50 9 chr10 101837574 101837893 -43751395 + L1ME3A LINE L1 5611 5942 -228 1843 200 62 18 chr10 101837958 101838004 -43751284 + L1MB8 LINE L1 5705 5748 -430 2184 110 0 0 chr10 101838004 101838312 -43750976 + AluSx SINE Alu 1 308 -4 1843 200 62 18 chr10 101838312 101838719 -43750569 + L1MB8 LINE L1 5748 6178 0 28 79 0 0 chr10 101838819 101838882 -43750406 + AT_rich Low_complexity Low_complexity 1 63 0 2288 83 0 0 chr10 101839397 101839697 -43749591 - AluSg SINE Alu -9 301 2 358 284 161 19 chr10 101839740 101839895 -43749393 - MIR SINE MIR 0 262 86 3761 76 45 38 chr10 101840056 101840128 -43749160 - MER41A LTR ERV1 0 554 484 2008 145 0 0 chr10 101840128 101840439 -43748849 + AluSx SINE Alu 1 311 -1 3761 76 45 38 chr10 101840439 101840535 -43748753 - MER41A LTR ERV1 -70 484 390 1919 117 0 7 chr10 101840535 101840844 -43748444 - AluSg SINE Alu 0 307 1 3761 76 45 38 chr10 101840844 101841222 -43748066 - MER41A LTR ERV1 -164 390 1 1270 239 133 46 chr10 101842484 101843010 -43746278 - MER34C LTR ERV1 -1 584 13 2146 94 0 3 chr10 101843405 101843693 -43745595 - AluSq SINE Alu -26 287 1 810 145 29 7 chr10 101843715 101843853 -43745435 + MLT1A1 LTR MaLR 24 164 -201 225 65 0 0 chr10 101844233 101844264 -43745024 + (TG)n Simple_repeat Simple_repeat 1 31 0 2295 97 7 0 chr10 101844582 101844892 -43744396 + AluSx SINE Alu 1 312 0 348 271 113 20 chr10 101844991 101845142 -43744146 + MIR SINE MIR 9 173 -89 2295 85 7 0 chr10 101845731 101846227 -43743061 - AluSg SINE Alu 0 498 1 1034 75 0 0 chr10 101846227 101846360 -43742928 - AluSg SINE Alu -177 133 1 205 291 244 0 chr10 101846569 101846655 -43742633 + L2 LINE L2 3206 3312 -1 182 118 29 0 chr10 101847040 101847074 -43742214 + (TAA)n Simple_repeat Simple_repeat 2 36 0 197 192 135 19 chr10 101847349 101847401 -43741887 - L2 LINE L2 -24 3248 3191 1975 113 28 0 chr10 101847619 101847901 -43741387 - AluSq SINE Alu -23 290 1 2108 117 0 0 chr10 101849500 101849799 -43739489 + AluSx SINE Alu 5 303 -9 2493 140 78 91 chr10 101849915 101850179 -43739109 - MER4A LTR ERV1 -2 598 332 2264 90 0 3 chr10 101850179 101850491 -43738797 - AluY SINE Alu 0 311 1 2493 140 78 91 chr10 101850491 101850711 -43738577 - MER4A LTR ERV1 -268 332 121 1897 123 34 3 chr10 101850711 101851004 -43738284 - AluSx SINE Alu -10 302 1 2493 140 78 91 chr10 101851004 101851124 -43738164 - MER4A LTR ERV1 -479 121 1 454 215 92 13 chr10 101851698 101851846 -43737442 + L1ME4a LINE L1 5519 5670 -451 210 327 0 0 chr10 101851892 101851944 -43737344 - L2 LINE L2 -74 3198 3147 363 228 77 130 chr10 101851958 101852159 -43737129 + L1ME4a LINE L1 5667 5877 -244 2362 69 0 0 chr10 101852159 101852450 -43736838 - AluSg SINE Alu -19 291 1 363 228 77 130 chr10 101852450 101852505 -43736783 + L1ME4a LINE L1 5877 5933 -188 1673 170 0 29 chr10 101852505 101852811 -43736477 + AluJb SINE Alu 1 297 -15 363 228 77 130 chr10 101852811 101853031 -43736257 + L1ME4a LINE L1 5933 6119 -2 1369 137 35 18 chr10 101853124 101853350 -43735938 - MER30 DNA MER1_type 0 230 1 950 273 81 20 chr10 101853356 101853854 -43735434 - L1ME3A LINE L1 -313 5857 5334 2090 140 70 43 chr10 101854547 101854750 -43734538 - L1MB3 LINE L1 -10 6173 5977 2159 97 0 3 chr10 101854750 101855049 -43734239 - AluSx SINE Alu -14 298 1 2090 140 70 43 chr10 101855049 101855260 -43734028 - L1MB3 LINE L1 -206 5977 5748 903 175 18 29 chr10 101855260 101855431 -43733857 - MLT1A1 LTR MaLR 0 365 197 2403 57 3 0 chr10 101855432 101855733 -43733555 - AluY SINE Alu -9 302 1 943 186 5 79 chr10 101855788 101856003 -43733285 - MLT1A1 LTR MaLR -166 199 1 1048 124 0 24 chr10 101856003 101856172 -43733116 - L1MB3 LINE L1 -442 5741 5577 1704 139 4 11 chr10 101856181 101856462 -43732826 - AluJo SINE Alu -18 294 16 569 231 84 7 chr10 101856683 101856826 -43732462 - MIR SINE MIR -1 261 108 233 337 118 24 chr10 101856827 101856996 -43732292 - MIR3 SINE MIR -7 201 17 1549 179 18 0 chr10 101858644 101858918 -43730370 - Tigger3(Golem) DNA MER2_type 0 3038 2760 431 197 0 13 chr10 101858964 101859040 -43730248 - Tigger3(Golem) DNA MER2_type -2953 76 2 189 280 68 68 chr10 101859973 101860091 -43729197 - MIR SINE MIR -29 233 116 197 323 16 16 chr10 101860138 101860200 -43729088 - L2 LINE L2 -84 3188 3127 2166 100 10 0 chr10 101860500 101860801 -43728487 + AluSq SINE Alu 1 304 -9 589 118 59 0 chr10 101860812 101860897 -43728391 + 5S rRNA rRNA 1 90 -31 798 266 48 0 chr10 101860939 101861168 -43728120 - L1ME LINE L1 -341 5780 5541 2499 34 0 3 chr10 101861168 101861463 -43727825 - AluY SINE Alu -17 294 1 2084 118 0 3 chr10 101861537 101861834 -43727454 + AluSx SINE Alu 1 296 -16 794 261 38 42 chr10 101862340 101862366 -43726922 + MIR SINE MIR 4 29 -233 1970 125 0 3 chr10 101862366 101862661 -43726627 + AluSq SINE Alu 1 294 -19 794 261 38 42 chr10 101862661 101862769 -43726519 + MIR SINE MIR 29 139 -123 1762 145 91 26 chr10 101862769 101863121 -43726167 + THE1C LTR MaLR 1 375 0 794 261 38 42 chr10 101863121 101863223 -43726065 + MIR SINE MIR 139 240 -22 2393 72 0 0 chr10 101863236 101863541 -43725747 - AluY SINE Alu -6 305 1 2261 99 3 0 chr10 101863541 101863843 -43725445 - AluSp SINE Alu -10 303 1 1170 147 13 49 chr10 101864655 101864880 -43724408 - MER20 DNA MER1_type -1 218 2 2176 90 0 16 chr10 101864882 101865193 -43724095 - AluY SINE Alu -4 307 2 2089 120 0 0 chr10 101865220 101865519 -43723769 - AluSq SINE Alu -14 299 1 207 0 0 0 chr10 101866100 101866123 -43723165 + (A)n Simple_repeat Simple_repeat 1 23 0 1937 98 11 7 chr10 101866126 101866401 -43722887 - AluSq SINE Alu -37 276 1 2237 97 3 6 chr10 101867767 101868078 -43721210 + AluSq SINE Alu 1 310 -3 1227 192 76 14 chr10 101868818 101869094 -43720194 - MLT1C LTR MaLR -2 465 173 2393 73 0 6 chr10 101869141 101869454 -43719834 - AluY SINE Alu 0 311 1 2071 133 3 0 chr10 101869453 101869761 -43719527 - AluSx SINE Alu -3 309 1 * 451 135 104 198 chr10 101869761 101869983 -43719305 - MLT1C LTR MaLR -261 206 6 1923 149 3 0 chr10 101870189 101870491 -43718797 - AluSx SINE Alu -9 303 1 2359 136 74 5 chr10 101871136 101871540 -43717748 - MSTB1 LTR MaLR 0 432 1 1814 149 3 0 chr10 101871765 101872071 -43717217 - AluSx SINE Alu 0 307 1 189 224 164 15 chr10 101872401 101872468 -43716820 + L3 LINE CR1 80 156 -1421 1777 99 73 7 chr10 101872885 101873157 -43716131 - AluSq SINE Alu -23 290 1 257 324 206 7 chr10 101873169 101873305 -43715983 - L2 LINE L2 -1 3271 3109 184 343 43 0 chr10 101873388 101873458 -43715830 + L2 LINE L2 3186 3258 -14 180 111 0 0 chr10 101873464 101873491 -43715797 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 2228 111 0 0 chr10 101873544 101873850 -43715438 + AluSx SINE Alu 1 306 -6 323 304 134 35 chr10 101874185 101874356 -43714932 - MER5B DNA MER1_type -1 177 1 1108 189 5 23 chr10 101874905 101875122 -43714166 + AluJb SINE Alu 1 213 -99 759 260 18 0 chr10 101875923 101876092 -43713196 + MIR3 SINE MIR 32 203 -5 2325 88 0 0 chr10 101876109 101876414 -43712874 + AluSx SINE Alu 1 305 -7 2237 103 0 0 chr10 101876450 101876751 -43712537 + AluSx SINE Alu 1 301 -11 2028 132 0 0 chr10 101876873 101877162 -43712126 - AluSx SINE Alu -23 289 1 225 94 0 0 chr10 101879272 101879304 -43709984 + (TGAA)n Simple_repeat Simple_repeat 3 34 0 527 221 36 36 chr10 101879333 101879473 -43709815 - MIR SINE MIR -31 231 92 1677 99 116 46 chr10 101879478 101879762 -43709526 + AluSx SINE Alu 1 304 -8 279 273 91 10 chr10 101879927 101880026 -43709262 + MIR SINE MIR 86 192 -70 722 213 72 31 chr10 101880035 101880261 -43709027 + L1ME1 LINE L1 5945 6163 -1 200 306 16 0 chr10 101880269 101880331 -43708957 + MIR SINE MIR 200 262 0 1717 127 57 47 chr10 101880488 101880788 -43708500 - AluSx SINE Alu -9 303 1 2042 136 0 0 chr10 101881764 101882066 -43707222 + AluSx SINE Alu 1 302 -10 2035 115 0 0 chr10 101882247 101882534 -43706754 - AluSx SINE Alu -25 287 1 1712 156 0 10 chr10 101882911 101883206 -43706082 + AluJb SINE Alu 1 292 -20 1700 151 26 30 chr10 101883984 101884289 -43704999 + AluJo SINE Alu 1 304 -8 200 128 0 103 chr10 101885391 101885430 -43703858 - MIR SINE MIR -61 147 113 186 295 19 67 chr10 101885443 101885501 -43703787 - L3 LINE CR1 -574 1003 951 1936 140 17 0 chr10 101885501 101885801 -43703487 + AluSx SINE Alu 1 305 -7 186 295 19 67 chr10 101885801 101885847 -43703441 - L3 LINE CR1 -626 951 904 1734 146 0 0 chr10 101886317 101886577 -43702711 + AluJb SINE Alu 35 294 -18 2165 108 3 0 chr10 101886621 101886917 -43702371 + AluSp SINE Alu 1 297 -16 657 300 129 23 chr10 101887070 101887373 -43701915 + MLT1K LTR MaLR 5 339 -249 437 231 10 10 chr10 101887439 101887543 -43701745 + MLT1K LTR MaLR 457 560 -28 318 322 85 0 chr10 101887846 101887964 -43701324 + MIR3 SINE MIR 78 205 -3 223 125 0 0 chr10 101888783 101888815 -43700473 + L2 LINE L2 3264 3295 -18 180 77 0 0 chr10 101888820 101888846 -43700442 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 310 215 60 44 chr10 101888940 101889056 -43700232 - MER5B DNA MER1_type -3 186 64 240 265 29 15 chr10 101889062 101889130 -43700158 + MIR SINE MIR 106 174 -88 582 220 125 35 chr10 101889215 101889403 -43699885 - MIR SINE MIR -48 214 3 740 169 0 29 chr10 101889563 101889699 -43699589 - FLAM_A SINE Alu 0 133 2 216 200 0 0 chr10 101889916 101889956 -43699332 + (TATATG)n Simple_repeat Simple_repeat 3 42 0 456 216 152 0 chr10 101890445 101890570 -43698718 - MIR SINE MIR -27 235 92 239 266 0 16 chr10 101891805 101891869 -43697419 + (CA)n Simple_repeat Simple_repeat 2 64 0 2210 106 0 0 chr10 101892914 101893217 -43696071 - AluSg SINE Alu -7 303 1 308 288 76 15 chr10 101893223 101893355 -43695933 - MER5A DNA MER1_type -1 188 49 * 406 281 16 31 chr10 101893241 101893369 -43695919 + MER5A DNA MER1_type 37 162 -27 1117 234 77 34 chr10 101894404 101894755 -43694533 + MLT1J2 LTR MaLR 72 437 -13 2094 108 7 0 chr10 101894767 101895064 -43694224 - AluSx SINE Alu -13 299 1 866 243 134 19 chr10 101895069 101895471 -43693817 + MLT1G LTR MaLR 1 443 -124 526 216 48 9 chr10 101895566 101895711 -43693577 + MLT1H1 LTR MaLR 419 555 0 1999 120 0 38 chr10 101895895 101896211 -43693077 - AluSx SINE Alu -8 304 1 196 157 118 20 chr10 101897273 101897324 -43691964 + MIR3 SINE MIR 113 168 -40 586 276 63 11 chr10 101898209 101898383 -43690905 + MIR SINE MIR 45 227 -35 206 305 107 38 chr10 101900134 101900265 -43689023 + MIR SINE MIR 14 153 -109 1858 103 8 4 chr10 101900365 101900628 -43688660 - AluSg SINE Alu -6 304 41 2271 61 7 7 chr10 101900770 101901065 -43688223 + AluY SINE Alu 1 295 -16 337 98 0 20 chr10 101901131 101901182 -43688106 + MER61A LTR ERV1 3 52 -291 229 389 0 0 chr10 101901306 101901396 -43687892 + L2 LINE L2 3182 3271 -1 212 271 17 0 chr10 101901746 101901805 -43687483 + MIR3 SINE MIR 131 190 -18 231 329 0 0 chr10 101902368 101902450 -43686838 - L2 LINE L2 -727 2587 2506 702 289 14 89 chr10 101902480 101902829 -43686459 + L2 LINE L2 2948 3270 -2 251 240 0 0 chr10 101902928 101902978 -43686310 - L2 LINE L2 -1 3271 3222 294 273 139 29 chr10 101903016 101903188 -43686100 + MER117 DNA MER1_type 1 191 -6 249 333 22 52 chr10 101903264 101903531 -43685757 - L2 LINE L2 -173 3099 2841 1338 235 81 43 chr10 101904304 101904944 -43684344 + L1ME2 LINE L1 5468 6162 -2 746 158 24 16 chr10 101904971 101905224 -43684064 + GA-rich Low_complexity Low_complexity 1 254 0 314 263 53 0 chr10 101906621 101906697 -43682591 + MIR SINE MIR 79 158 -104 345 293 57 28 chr10 101906862 101906968 -43682320 - MER5B DNA MER1_type -69 109 1 2192 94 3 0 chr10 101907221 101907518 -43681770 - AluSg SINE Alu -12 298 1 276 77 0 0 chr10 101907575 101907614 -43681674 + (TG)n Simple_repeat Simple_repeat 2 40 0 1920 116 10 27 chr10 101907675 101907976 -43681312 - AluSx SINE Alu -16 296 1 639 116 0 0 chr10 101908006 101908092 -43681196 + AluS SINE Alu 2 87 -225 1363 85 5 16 chr10 101908223 101908412 -43680876 - AluSq SINE Alu -126 187 1 656 319 26 53 chr10 101908715 101909122 -43680166 - L2 LINE L2 -233 3080 2688 668 107 68 0 chr10 101909122 101909225 -43680063 + AluSg/x SINE Alu 192 301 -8 437 289 169 59 chr10 101909232 101909658 -43679630 - L2 LINE L2 -916 2398 1926 418 337 82 5 chr10 101909704 101909888 -43679400 - L2 LINE L2 -243 3070 2873 233 344 80 0 chr10 101909885 101910010 -43679278 - L2 LINE L2 -1367 1947 1813 * 336 294 61 0 chr10 101910059 101910222 -43679066 + L1M4b LINE L1 23 195 -6664 1715 120 4 0 chr10 101910700 101910950 -43678338 + AluSx SINE Alu 1 251 -61 272 321 0 12 chr10 101911131 101911212 -43678076 - L2 LINE L2 -2938 376 297 228 169 24 36 chr10 101911644 101911727 -43677561 + CT-rich Low_complexity Low_complexity 2 83 0 1827 103 65 10 chr10 101912897 101913188 -43676100 + AluSq SINE Alu 1 307 -6 375 275 42 58 chr10 101913368 101913557 -43675731 + MER117 DNA MER1_type 1 186 -11 517 303 136 23 chr10 101913568 101913789 -43675499 + MIR SINE MIR 17 262 0 576 277 91 16 chr10 101913809 101914051 -43675237 - MIR SINE MIR -2 260 1 2009 114 3 7 chr10 101914246 101914535 -43674753 - AluSx SINE Alu -24 288 1 1927 57 0 4 chr10 101914572 101914819 -43674469 + AluY SINE Alu 54 299 -12 2416 81 0 3 chr10 101916002 101916298 -43672990 - AluSq SINE Alu -18 295 1 205 341 11 11 chr10 101917431 101917522 -43671766 + L3b LINE CR1 1374 1464 -119 426 234 149 13 chr10 101918229 101918383 -43670905 - MER5B DNA MER1_type -2 176 2 1527 112 69 0 chr10 101918989 101919221 -43670067 - L1PB3 LINE L1 0 6154 5907 294 158 24 12 chr10 101919266 101919313 -43669975 + A-rich Low_complexity Low_complexity 4 54 -32 1046 85 72 0 chr10 101919313 101919466 -43669822 + L1PA7 LINE L1 5991 6154 0 294 158 24 12 chr10 101919466 101919500 -43669788 + A-rich Low_complexity Low_complexity 54 86 0 496 300 56 44 chr10 101919892 101920142 -43669146 - MIR SINE MIR -3 259 7 180 286 0 0 chr10 101920189 101920231 -43669057 - L2 LINE L2 -17 3255 3214 248 292 9 53 chr10 101921156 101921269 -43668019 + L2 LINE L2 3204 3311 -2 285 331 40 8 chr10 101921498 101921622 -43667666 + L2 LINE L2 3136 3263 -9 361 257 34 63 chr10 101921816 101921991 -43667297 + MIR SINE MIR 46 215 -47 2959 6 0 0 chr10 101921992 101922305 -43666983 + AluYb8 SINE Alu 1 313 -5 268 243 168 0 chr10 101922656 101922763 -43666525 + MIR SINE MIR 14 138 -124 317 249 20 50 chr10 101923639 101923739 -43665549 + MIR3 SINE MIR 77 174 -34 320 319 84 18 chr10 101924887 101925034 -43664254 + MIR SINE MIR 38 200 -62 2163 147 0 0 chr10 101925034 101925334 -43663954 - AluSx SINE Alu -12 300 1 320 319 84 18 chr10 101925334 101925366 -43663922 + MIR SINE MIR 200 228 -34 400 351 78 16 chr10 101926845 101927090 -43662198 + MIR SINE MIR 3 262 0 333 87 22 0 chr10 101927743 101927789 -43661499 - MER75 DNA T2_type -5 499 453 1981 145 0 10 chr10 101928815 101929111 -43660177 + AluSx SINE Alu 1 293 -19 531 92 0 0 chr10 101929360 101929447 -43659841 + (TC)n Simple_repeat Simple_repeat 2 88 0 859 264 14 5 chr10 101929454 101929666 -43659622 + MIR SINE MIR 1 214 -48 1821 109 60 8 chr10 101930056 101930323 -43658965 + AluSx SINE Alu 1 281 -31 281 67 0 22 chr10 101930327 101930372 -43658916 + (TAAAA)n Simple_repeat Simple_repeat 2 45 0 282 313 52 8 chr10 101930590 101930724 -43658564 - MIR3 SINE MIR -39 169 30 186 43 0 0 chr10 101931621 101931644 -43657644 + (ATG)n Simple_repeat Simple_repeat 2 24 0 296 296 19 28 chr10 101931675 101931783 -43657505 - L2 LINE L2 -6 3307 3201 416 239 86 8 chr10 101932180 101932297 -43656991 - L2 LINE L2 -5 3308 3183 6722 73 25 1 chr10 101932710 101933709 -43655579 + L1PA10 LINE L1 5149 6168 0 286 311 109 8 chr10 101933875 101933994 -43655294 + MIR3 SINE MIR 15 145 -63 215 309 45 0 chr10 101934072 101934182 -43655106 - MIR SINE MIR -23 239 125 746 209 76 6 chr10 101934287 101934459 -43654829 - MER5A DNA MER1_type -1 188 5 408 329 70 33 chr10 101935027 101935270 -43654018 + MIR SINE MIR 11 262 0 1744 150 98 0 chr10 101935788 101936095 -43653193 - MER1B DNA MER1_type 0 337 1 431 167 13 0 chr10 101936531 101936609 -43652679 - MER116 DNA Mariner -1 79 1 2356 98 0 3 chr10 101936698 101936995 -43652293 - AluSg SINE Alu -14 296 1 2228 112 3 0 chr10 101936997 101937291 -43651997 - AluSx SINE Alu -16 296 2 823 279 147 33 chr10 101937392 101938051 -43651237 + L1MC4a LINE L1 5317 6050 -1758 1839 154 11 3 chr10 101938131 101938417 -43650871 + AluJo SINE Alu 1 288 -24 284 145 81 0 chr10 101940171 101940233 -43649055 - L1MB7 LINE L1 0 6184 6118 547 277 13 19 chr10 101940252 101940411 -43648877 + MIR SINE MIR 1 158 -104 1942 195 68 14 chr10 101940412 101940838 -43648450 + LTR40b LTR ERVL 1 449 -13 250 252 68 78 chr10 101940845 101940948 -43648340 + MIR SINE MIR 156 257 -5 332 327 35 0 chr10 101941460 101941573 -43647715 + MIR SINE MIR 74 190 -72 244 271 0 0 chr10 101943311 101943370 -43645918 + (TGGA)n Simple_repeat Simple_repeat 3 61 0 266 176 20 0 chr10 101943381 101943432 -43645856 - L2 LINE L2 0 3272 3221 180 0 0 0 chr10 101943859 101943879 -43645409 + (T)n Simple_repeat Simple_repeat 1 20 0 180 0 0 0 chr10 101944005 101944025 -43645263 + (TG)n Simple_repeat Simple_repeat 2 21 0 6021 171 28 79 chr10 101944704 101945063 -43644225 + Charlie1a DNA MER1_type 1 377 -2384 1820 157 20 10 chr10 101945063 101945363 -43643925 - AluJb SINE Alu -9 303 1 6021 171 28 79 chr10 101945363 101946520 -43642768 + Charlie1a DNA MER1_type 377 1440 -15 724 210 45 65 chr10 101948555 101948616 -43640672 - MIR SINE MIR -8 254 193 3421 39 0 2 chr10 101948616 101949023 -43640265 - L1PA6 LINE L1 -7 6147 5742 724 210 45 65 chr10 101949023 101949192 -43640096 - MIR SINE MIR -69 193 31 465 301 151 5 chr10 101950221 101950440 -43638848 + MIR SINE MIR 3 253 -9 235 176 39 0 chr10 101950441 101950492 -43638796 + (CAT)n Simple_repeat Simple_repeat 1 53 0 383 282 45 0 chr10 101951136 101951246 -43638042 + MIR3 SINE MIR 78 192 -16 2281 209 84 59 chr10 101952229 101952905 -43636383 + L1MC4a LINE L1 6106 6798 -1010 426 175 0 0 chr10 101953406 101953486 -43635802 + (TA)n Simple_repeat Simple_repeat 1 80 0 1995 130 10 10 chr10 101953486 101953778 -43635510 - AluSx SINE Alu -20 292 1 411 273 65 13 chr10 101954126 101954280 -43635008 + MLT1J LTR MaLR 36 197 -314 204 245 0 0 chr10 101955402 101955451 -43633837 + L2 LINE L2 3179 3227 -86 236 239 64 83 chr10 101955503 101955612 -43633676 - MIR SINE MIR -73 135 28 280 289 16 23 chr10 101956324 101956452 -43632836 + L1ME4a LINE L1 5672 5798 -2010 2291 97 3 0 chr10 101956517 101956805 -43632483 + AluSx SINE Alu 1 289 -23 232 240 31 52 chr10 101956857 101956953 -43632335 + L1ME4a LINE L1 5954 6047 -74 985 181 35 0 chr10 101956991 101957162 -43632126 - AluJb SINE Alu -2 310 134 360 68 0 0 chr10 101957614 101957658 -43631630 - L1M3 LINE L1 -510 5673 5630 2231 100 0 10 chr10 101957658 101957959 -43631329 - AluSx SINE Alu -14 298 1 215 180 20 20 chr10 101958161 101958211 -43631077 - MER5B DNA MER1_type 0 178 129 2318 107 0 13 chr10 101959120 101959429 -43629859 + AluSq SINE Alu 1 305 -8 23 0 0 0 chr10 101960458 101960481 -43628807 + AT_rich Low_complexity Low_complexity 1 23 0 235 276 17 0 chr10 101963390 101963448 -43625840 + MIR3 SINE MIR 102 160 -48 421 268 0 27 chr10 101963502 101963614 -43625674 + MER117 DNA MER1_type 59 167 -30 22 70 0 0 chr10 101964365 101964408 -43624880 + AT_rich Low_complexity Low_complexity 1 43 0 550 315 99 13 chr10 101964605 101964907 -43624381 + L3 LINE CR1 1231 1558 -19 264 331 73 33 chr10 101965597 101965748 -43623540 - MIR SINE MIR -8 200 44 2167 130 0 13 chr10 101966068 101966383 -43622905 + AluSq SINE Alu 1 311 -2 21 0 0 0 chr10 101966491 101966512 -43622776 + AT_rich Low_complexity Low_complexity 1 21 0 227 303 79 0 chr10 101967074 101967163 -43622125 + MIR SINE MIR 98 193 -69 300 211 113 23 chr10 101968288 101968421 -43620867 - HAL1 LINE L1 -136 2371 2227 323 312 52 32 chr10 101968467 101968621 -43620667 - HAL1b LINE L1 -433 915 759 189 107 0 0 chr10 101968846 101968874 -43620414 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 2074 119 0 0 chr10 101968876 101969161 -43620127 - AluSx SINE Alu -27 285 1 2498 58 0 0 chr10 101969208 101969519 -43619769 - AluY SINE Alu 0 311 1 297 119 15 30 chr10 101969629 101969696 -43619592 + (TA)n Simple_repeat Simple_repeat 1 66 0 2144 93 0 3 chr10 101969922 101970212 -43619076 + AluSc SINE Alu 1 289 -20 33 0 0 0 chr10 101970989 101971022 -43618266 + AT_rich Low_complexity Low_complexity 1 33 0 480 253 103 23 chr10 101971119 101971293 -43617995 - MER5A DNA MER1_type -1 188 1 491 265 242 25 chr10 101972787 101973281 -43616007 + L2 LINE L2 2717 3312 -1 336 273 158 29 chr10 101973277 101973416 -43615872 - MIR SINE MIR -75 187 31 * 2073 125 0 0 chr10 101974349 101974646 -43614642 + AluSc SINE Alu 1 297 -12 735 168 91 49 chr10 101974646 101974813 -43614475 + AluSg/x SINE Alu 134 306 0 799 154 0 29 chr10 101975088 101975224 -43614064 - FLAM_C SINE Alu -1 132 1 1223 94 33 6 chr10 101975612 101975792 -43613496 - AluSg/x SINE Alu -7 305 121 348 24 0 0 chr10 101976546 101976587 -43612701 + (TG)n Simple_repeat Simple_repeat 2 42 0 370 267 12 0 chr10 101977771 101977857 -43611431 + L2 LINE L2 3184 3270 -2 285 230 299 0 chr10 101977890 101977977 -43611311 - MER81 DNA DNA -1 113 1 204 40 0 0 chr10 101978011 101978036 -43611252 + (TCC)n Simple_repeat Simple_repeat 1 25 0 629 235 195 5 chr10 101978055 101978255 -43611033 - MIR SINE MIR -4 258 21 337 173 186 58 chr10 101979008 101979164 -43610124 - MER69A DNA AcHobo 0 177 2 683 186 8 0 chr10 101979293 101979422 -43609866 + FLAM_A SINE Alu 13 142 0 785 236 165 45 chr10 101979763 101980144 -43609144 - L1MC4 LINE L1 0 8042 7616 813 152 0 23 chr10 101980212 101980344 -43608944 - AluJb SINE Alu -180 132 4 448 262 44 27 chr10 101980344 101980527 -43608761 - L1MC4 LINE L1 -499 7543 7358 1182 100 12 0 chr10 101980548 101980718 -43608570 - AluSg/x SINE Alu -7 303 132 2142 102 0 3 chr10 101980718 101981012 -43608276 - AluSx SINE Alu -19 293 1 585 0 0 0 chr10 101981044 101981109 -43608179 + (TA)n Simple_repeat Simple_repeat 1 65 0 1920 141 13 7 chr10 101981935 101982239 -43607049 + AluSx SINE Alu 1 306 -6 2341 62 0 26 chr10 101982239 101982548 -43606740 + AluY SINE Alu 1 301 -10 633 219 32 0 chr10 101982836 101982959 -43606329 - FLAM_A SINE Alu -4 129 3 2005 92 46 0 chr10 101983057 101983341 -43605947 + AluSq SINE Alu 1 297 -16 254 141 459 24 chr10 101983380 101983465 -43605823 + MER69 DNA AcHobo 1 122 -1104 918 261 35 31 chr10 101985666 101985927 -43603361 + MIR SINE MIR 1 262 0 2110 165 14 8 chr10 101985957 101986320 -43602968 - MLT1A1 LTR MaLR 0 365 1 589 240 34 63 chr10 101986824 101986999 -43602289 - MIR3 SINE MIR -4 204 35 1155 218 122 75 chr10 101988422 101988496 -43600792 - MLT1C LTR MaLR 0 467 398 1681 155 29 23 chr10 101988496 101988806 -43600482 + AluJo SINE Alu 1 312 0 1155 218 122 75 chr10 101988806 101989044 -43600244 - MLT1C LTR MaLR -69 398 126 2034 132 0 7 chr10 101989044 101989354 -43599934 + AluSx SINE Alu 1 308 -4 1155 218 122 75 chr10 101989354 101989481 -43599807 - MLT1C LTR MaLR -341 126 6 2123 109 0 10 chr10 101989495 101989833 -43599455 - AluSx SINE Alu 0 312 1 2623 251 91 59 chr10 101989839 101990951 -43598337 + L2 LINE L2 875 2021 -1293 2042 87 19 32 chr10 101991026 101991337 -43597951 + AluSx SINE Alu 1 307 -5 2159 124 0 0 chr10 101991388 101991687 -43597601 - AluSx SINE Alu -13 299 1 759 260 18 0 chr10 101991704 101991873 -43597415 - MIR3 SINE MIR -5 203 32 1124 184 5 23 chr10 101992674 101992891 -43596397 - AluJb SINE Alu -99 213 1 323 304 134 35 chr10 101993440 101993611 -43595677 + MER5B DNA MER1_type 1 177 -1 2228 111 0 0 chr10 101993946 101994252 -43595036 - AluSx SINE Alu -6 306 1 180 111 0 0 chr10 101994305 101994332 -43594956 + (CTCA)n Simple_repeat Simple_repeat 1 27 0 184 343 43 0 chr10 101994338 101994408 -43594880 - L2 LINE L2 -14 3258 3186 257 324 206 7 chr10 101994491 101994627 -43594661 + L2 LINE L2 3109 3271 -1 1777 99 73 7 chr10 101994639 101994911 -43594377 + AluSq SINE Alu 1 290 -23 189 224 164 15 chr10 101995328 101995395 -43593893 - L3 LINE CR1 -1421 156 80 1815 149 3 0 chr10 101995725 101996031 -43593257 + AluSx SINE Alu 1 307 0 2359 136 74 5 chr10 101996256 101996660 -43592628 + MSTB1 LTR MaLR 1 432 0 1941 146 3 0 chr10 101997305 101997607 -43591681 + AluSx SINE Alu 1 303 -9 451 135 104 198 chr10 101997813 101998035 -43591253 + MLT1C LTR MaLR 6 206 -261 2071 133 3 0 chr10 101998035 101998343 -43590945 + AluSx SINE Alu 1 309 -3 2393 73 0 6 chr10 101998343 101998655 -43590633 + AluY SINE Alu 1 311 0 1206 191 76 18 chr10 101998703 101998980 -43590308 + MLT1C LTR MaLR 173 465 -2 2237 97 3 6 chr10 101999720 102000031 -43589257 - AluSq SINE Alu -3 310 1 1937 98 11 7 chr10 102001397 102001672 -43587616 + AluSq SINE Alu 1 276 -37 1095 87 7 0 chr10 102001675 102001824 -43587464 - AluSg/x SINE Alu -6 304 155 204 40 0 0 chr10 102002001 102002026 -43587262 + (TCC)n Simple_repeat Simple_repeat 1 25 0 608 231 201 5 chr10 102002045 102002244 -43587044 - MIR SINE MIR -4 258 21 337 173 186 58 chr10 102002997 102003153 -43586135 - MER69A DNA AcHobo 0 177 2 683 186 8 0 chr10 102003282 102003411 -43585877 + FLAM_A SINE Alu 13 142 0 785 236 165 45 chr10 102003752 102004133 -43585155 - L1MC4 LINE L1 0 8042 7616 813 152 0 23 chr10 102004201 102004333 -43584955 - AluJb SINE Alu -180 132 4 448 262 44 27 chr10 102004333 102004516 -43584772 - L1MC4 LINE L1 -499 7543 7358 1182 100 12 0 chr10 102004537 102004707 -43584581 - AluSg/x SINE Alu -7 303 132 2142 102 0 3 chr10 102004707 102005001 -43584287 - AluSx SINE Alu -19 293 1 261 0 0 0 chr10 102005031 102005060 -43584228 + (TA)n Simple_repeat Simple_repeat 1 29 0 1928 141 13 7 chr10 102005886 102006191 -43583097 + AluSx SINE Alu 1 307 -5 2314 61 0 29 chr10 102006191 102006502 -43582786 + AluY SINE Alu 1 302 -9 633 219 32 0 chr10 102006790 102006913 -43582375 - FLAM_A SINE Alu -4 129 3 850 139 162 37 chr10 102006978 102007011 -43582277 + MER119 DNA MER1_type 341 369 -214 1956 89 46 13 chr10 102007011 102007313 -43581975 + AluSx SINE Alu 1 312 0 850 139 162 37 chr10 102007313 102007495 -43581793 + MER119 DNA MER1_type 368 583 0 282 182 0 0 chr10 102007635 102007701 -43581587 + CT-rich Low_complexity Low_complexity 1 66 0 1904 122 0 7 chr10 102008032 102008341 -43580947 - AluSx SINE Alu 0 307 1 261 211 78 9 chr10 102008589 102008675 -43580613 + MIR SINE MIR 61 152 -56 413 263 204 0 chr10 102008877 102009029 -43580259 - MIR SINE MIR -10 252 70 1212 117 24 15 chr10 102009610 102009815 -43579473 + AluSg/x SINE Alu 103 309 -1 1497 158 27 38 chr10 102009976 102010268 -43579020 + AluJb SINE Alu 2 290 -22 335 263 116 11 chr10 102010349 102010444 -43578844 + MIR3 SINE MIR 74 178 -30 2288 83 0 0 chr10 102012074 102012374 -43576914 - AluSg SINE Alu -9 301 2 358 284 161 19 chr10 102012417 102012572 -43576716 - MIR SINE MIR 0 262 86 3761 76 45 38 chr10 102012733 102012805 -43576483 - MER41A LTR ERV1 0 554 484 2008 145 0 0 chr10 102012805 102013116 -43576172 + AluSx SINE Alu 1 311 -1 3761 76 45 38 chr10 102013116 102013212 -43576076 - MER41A LTR ERV1 -70 484 390 1919 117 0 7 chr10 102013212 102013521 -43575767 - AluSg SINE Alu 0 307 1 3761 76 45 38 chr10 102013521 102013899 -43575389 - MER41A LTR ERV1 -164 390 1 1270 239 133 46 chr10 102015161 102015687 -43573601 - MER34C LTR ERV1 -1 584 13 2007 101 7 7 chr10 102016082 102016369 -43572919 - AluSq SINE Alu -26 287 1 800 152 29 7 chr10 102016391 102016529 -43572759 + MLT1A1 LTR MaLR 24 164 -201 180 273 45 0 chr10 102016529 102016573 -43572715 - L3 LINE CR1 -9 1568 1523 225 65 0 0 chr10 102016909 102016940 -43572348 + (TG)n Simple_repeat Simple_repeat 1 31 0 2424 97 7 0 chr10 102017258 102017568 -43571720 + AluSx SINE Alu 1 312 0 281 274 29 10 chr10 102017702 102017804 -43571484 + MIR SINE MIR 50 153 -109 2424 85 7 0 chr10 102018407 102018903 -43570385 - AluSg SINE Alu 0 498 1 1093 75 0 0 chr10 102018903 102019036 -43570252 - AluSg SINE Alu -177 133 1 182 118 29 0 chr10 102019716 102019750 -43569538 + (TAA)n Simple_repeat Simple_repeat 2 36 0 2095 113 28 0 chr10 102020295 102020577 -43568711 - AluSq SINE Alu -23 290 1 2232 117 0 0 chr10 102022176 102022475 -43566813 + AluSx SINE Alu 5 303 -9 2495 143 78 85 chr10 102022591 102022851 -43566437 - MER4A LTR ERV1 -2 598 338 2392 82 0 16 chr10 102022851 102023167 -43566121 - AluY SINE Alu 0 311 1 2495 143 78 85 chr10 102023167 102023387 -43565901 - MER4A LTR ERV1 -262 338 120 2021 123 34 3 chr10 102023387 102023680 -43565608 - AluSx SINE Alu -10 302 1 2495 143 78 85 chr10 102023680 102023800 -43565488 - MER4A LTR ERV1 -480 120 1 453 188 27 44 chr10 102024374 102024511 -43564777 + L1ME4a LINE L1 5519 5645 -476 196 327 0 0 chr10 102024568 102024620 -43564668 - L2 LINE L2 -74 3198 3147 386 228 77 130 chr10 102024634 102024835 -43564453 + L1ME4a LINE L1 5667 5877 -244 2481 72 0 0 chr10 102024835 102025126 -43564162 - AluSg SINE Alu -19 291 1 386 228 77 130 chr10 102025126 102025181 -43564107 + L1ME4a LINE L1 5877 5933 -188 1790 167 0 29 chr10 102025181 102025487 -43563801 + AluJb SINE Alu 1 297 -15 386 228 77 130 chr10 102025487 102025707 -43563581 + L1ME4a LINE L1 5933 6119 -2 1372 137 35 18 chr10 102025800 102026026 -43563262 - MER30 DNA MER1_type 0 230 1 973 273 81 20 chr10 102026032 102026530 -43562758 - L1ME3A LINE L1 -313 5857 5334 2100 140 70 43 chr10 102027223 102027426 -43561862 - L1MB3 LINE L1 -10 6173 5977 2289 97 0 3 chr10 102027426 102027725 -43561563 - AluSx SINE Alu -14 298 1 2100 140 70 43 chr10 102027725 102027936 -43561352 - L1MB3 LINE L1 -206 5977 5748 957 173 6 29 chr10 102027936 102028109 -43561179 - MLT1A1 LTR MaLR 0 365 197 2536 57 3 0 chr10 102028110 102028411 -43560877 - AluY SINE Alu -9 302 1 935 186 5 79 chr10 102028466 102028681 -43560607 - MLT1A1 LTR MaLR -166 199 1 1060 124 0 24 chr10 102028681 102028850 -43560438 - L1MB3 LINE L1 -442 5741 5577 1814 139 4 11 chr10 102028859 102029140 -43560148 - AluJo SINE Alu -18 294 16 503 239 58 7 chr10 102029366 102029504 -43559784 - MIR SINE MIR -10 252 108 1558 179 18 0 chr10 102031322 102031596 -43557692 - Tigger3(Golem) DNA MER2_type 0 3038 2760 451 184 0 13 chr10 102031642 102031718 -43557570 - Tigger3(Golem) DNA MER2_type -2953 76 2 2292 100 10 0 chr10 102033177 102033478 -43555810 + AluSq SINE Alu 1 304 -9 585 118 59 0 chr10 102033489 102033574 -43555714 + 5S rRNA rRNA 1 90 -31 814 265 47 0 chr10 102033616 102033845 -43555443 - L1ME LINE L1 -341 5780 5540 2600 41 0 0 chr10 102033845 102034139 -43555149 - AluY SINE Alu -17 294 1 297 119 15 30 chr10 102034249 102034316 -43554972 + (TA)n Simple_repeat Simple_repeat 1 66 0 2269 93 0 3 chr10 102034542 102034832 -43554456 + AluSc SINE Alu 1 289 -20 33 0 0 0 chr10 102035609 102035642 -43553646 + AT_rich Low_complexity Low_complexity 1 33 0 413 253 103 23 chr10 102035739 102035913 -43553375 - MER5A DNA MER1_type -1 188 1 335 263 185 28 chr10 102037509 102037828 -43551460 + L2 LINE L2 2825 3193 -120 280 273 158 29 chr10 102037898 102038037 -43551251 - MIR SINE MIR -75 187 31 2192 125 0 0 chr10 102038970 102039267 -43550021 + AluSc SINE Alu 1 297 -12 708 175 91 49 chr10 102039267 102039434 -43549854 + AluSg/x SINE Alu 132 304 0 803 153 0 29 chr10 102039706 102039843 -43549445 - FLAM_C SINE Alu 0 133 1 1267 97 34 6 chr10 102040231 102040407 -43548881 - AluSg/x SINE Alu -11 299 119 294 29 0 0 chr10 102041161 102041196 -43548092 + (TG)n Simple_repeat Simple_repeat 2 36 0 335 267 12 0 chr10 102042380 102042466 -43546822 + L2 LINE L2 3184 3270 -2 283 230 299 0 chr10 102042499 102042586 -43546702 - MER81 DNA DNA -1 113 1 204 40 0 0 chr10 102042620 102042645 -43546643 + (TCC)n Simple_repeat Simple_repeat 1 25 0 547 235 195 5 chr10 102042664 102042864 -43546424 - MIR SINE MIR -4 258 21 352 199 167 39 chr10 102043617 102043773 -43545515 - MER69A DNA AcHobo 0 177 2 682 186 8 0 chr10 102043902 102044031 -43545257 + FLAM_A SINE Alu 13 142 0 800 236 165 45 chr10 102044372 102044753 -43544535 - L1MC4 LINE L1 0 8042 7616 824 139 0 0 chr10 102044838 102044953 -43544335 - AluJb SINE Alu -194 118 4 454 278 42 26 chr10 102044953 102045144 -43544144 - L1MC4 LINE L1 -499 7543 7350 1065 143 12 0 chr10 102045157 102045325 -43543963 - AluSg/x SINE Alu -9 303 134 2267 102 0 3 chr10 102045325 102045619 -43543669 - AluSx SINE Alu -19 293 1 585 0 0 0 chr10 102045651 102045716 -43543572 + (TA)n Simple_repeat Simple_repeat 1 65 0 2034 142 13 7 chr10 102046543 102046846 -43542442 + AluSx SINE Alu 1 305 -7 2475 62 0 26 chr10 102046846 102047155 -43542133 + AluY SINE Alu 1 301 -10 630 219 32 0 chr10 102047443 102047566 -43541722 - FLAM_A SINE Alu -4 129 3 2129 92 46 0 chr10 102047664 102047948 -43541340 + AluSq SINE Alu 1 297 -16 251 129 459 24 chr10 102047987 102048072 -43541216 + MER69 DNA AcHobo 1 122 -1104 810 272 27 23 chr10 102050277 102050534 -43538754 + MIR SINE MIR 5 262 0 2083 168 14 8 chr10 102050564 102050927 -43538361 - MLT1A1 LTR MaLR 0 365 1 522 240 34 63 chr10 102051431 102051606 -43537682 - MIR3 SINE MIR -4 204 35 715 244 75 78 chr10 102053029 102053103 -43536185 - MLT1C LTR MaLR 0 467 394 1775 158 29 23 chr10 102053103 102053413 -43535875 + AluJo SINE Alu 1 312 0 715 244 75 78 chr10 102053413 102053645 -43535643 - MLT1C LTR MaLR -73 394 162 2200 123 0 7 chr10 102053649 102053950 -43535338 + AluSx SINE Alu 1 299 -13 772 129 0 129 chr10 102054000 102054147 -43535141 + FLAM_C SINE Alu 2 129 -4 235 321 32 48 chr10 102054197 102054446 -43534842 + L1M4 LINE L1 4807 5051 -1095 2281 102 0 6 chr10 102054478 102054791 -43534497 - AluY SINE Alu 0 311 1 235 167 0 0 chr10 102055006 102055048 -43534240 + L1M LINE L1 5313 5354 -2454 216 97 0 0 chr10 102055564 102055595 -43533693 + (TA)n Simple_repeat Simple_repeat 1 31 0 1835 156 3 36 chr10 102055595 102055902 -43533386 - AluJb SINE Alu -15 297 1 2286 109 3 6 chr10 102056260 102056573 -43532715 + AluSx SINE Alu 1 312 0 2093 111 3 66 chr10 102056589 102056923 -43532365 + AluSp SINE Alu 1 313 0 256 303 82 16 chr10 102057230 102057352 -43531936 + MIR SINE MIR 120 249 -13 212 130 0 87 chr10 102057318 102057364 -43531924 + L2 LINE L2 3261 3302 -11 * 249 108 0 0 chr10 102057473 102057510 -43531778 + (CA)n Simple_repeat Simple_repeat 1 37 0 652 219 6 37 chr10 102057587 102057640 -43531648 - MIR SINE MIR 0 262 209 3463 143 45 27 chr10 102057640 102058264 -43531024 - MER41B LTR ERV1 0 635 1 652 219 6 37 chr10 102058264 102058374 -43530914 - MIR SINE MIR -53 209 104 2054 155 0 0 chr10 102058456 102058747 -43530541 + AluSx SINE Alu 1 291 -21 233 288 0 0 chr10 102058776 102058835 -43530453 + (CATATA)n Simple_repeat Simple_repeat 2 60 0 21 0 0 31 chr10 102058915 102058933 -43530355 + AT_rich Low_complexity Low_complexity 1 19 -12 2327 96 3 0 chr10 102058933 102059225 -43530063 + AluSx SINE Alu 1 293 -19 21 0 0 31 chr10 102059225 102059238 -43530050 + AT_rich Low_complexity Low_complexity 19 31 0 2280 84 3 29 chr10 102060281 102060592 -43528696 - AluSx SINE Alu -9 303 1 2182 97 10 3 chr10 102060793 102061081 -43528207 + AluSx SINE Alu 11 300 -12 481 248 21 14 chr10 102061094 102061235 -43528053 - L1ME4a LINE L1 -1 6120 5979 296 231 221 0 chr10 102061615 102061719 -43527569 + L2 LINE L2 3146 3272 0 241 232 58 0 chr10 102062050 102062119 -43527169 + MIR3 SINE MIR 85 157 -51 699 91 0 10 chr10 102062183 102062282 -43527006 + MER4A LTR ERV1 1 98 -566 1746 111 265 19 chr10 102062282 102062606 -43526682 + MER4A LTR ERV1 261 664 0 400 280 64 24 chr10 102063128 102063386 -43525902 - L1MEd LINE L1 -5163 969 713 2766 72 10 39 chr10 102063611 102063998 -43525290 + MER51B LTR ERV1 1 376 -1 308 244 32 57 chr10 102064071 102064194 -43525094 - MIR SINE MIR -57 205 86 422 264 70 23 chr10 102064977 102065106 -43524182 + MIR SINE MIR 51 185 -77 208 343 0 0 chr10 102065161 102065228 -43524060 - MIR SINE MIR -60 148 82 262 179 0 45 chr10 102065276 102065343 -43523945 + MIR SINE MIR 104 167 -95 839 199 136 0 chr10 102065391 102065582 -43523706 - MER46C DNA MER2_type -103 235 19 743 304 59 4 chr10 102066013 102066283 -43523005 - MER102b DNA MER1_type -20 321 37 333 172 65 32 chr10 102066311 102066404 -43522884 - MIR SINE MIR -13 249 154 268 254 68 17 chr10 102066405 102066523 -43522765 - LTR37B LTR ERV1 -147 321 198 1452 227 63 25 chr10 102066620 102066985 -43522303 - MLT1B LTR MaLR -8 382 4 500 252 13 26 chr10 102066986 102067137 -43522151 - LTR37B LTR ERV1 -313 155 7 2094 109 0 33 chr10 102067328 102067630 -43521658 + AluY SINE Alu 1 292 -19 2472 58 3 3 chr10 102067771 102068064 -43521224 + AluY SINE Alu 1 293 -18 263 272 27 109 chr10 102068078 102068225 -43521063 + L2 LINE L2 3137 3271 -1 225 180 0 0 chr10 102068230 102068280 -43521008 + (TGGA)n Simple_repeat Simple_repeat 2 51 0 862 159 0 0 chr10 102068481 102068613 -43520675 - FLAM_A SINE Alu -1 132 1 478 267 154 59 chr10 102068667 102068835 -43520453 - MIR SINE MIR -8 254 59 2171 121 0 6 chr10 102068835 102069149 -43520139 + AluSx SINE Alu 1 312 0 478 267 154 59 chr10 102069149 102069201 -43520087 - MIR SINE MIR -203 59 13 42 0 0 0 chr10 102069262 102069304 -43519984 + AT_rich Low_complexity Low_complexity 1 42 0 379 278 68 38 chr10 102069307 102069440 -43519848 - L2 LINE L2 -2 3311 3175 267 203 0 0 chr10 102070112 102070181 -43519107 + (TGGA)n Simple_repeat Simple_repeat 3 71 0 288 286 44 13 chr10 102070820 102070926 -43518362 + MIR SINE MIR 34 147 -61 2177 114 0 0 chr10 102071000 102071308 -43517980 - AluSg SINE Alu -2 308 1 1626 139 103 35 chr10 102072015 102072325 -43516963 - MER44D DNA MER2_type -8 601 1 1941 73 43 53 chr10 102072358 102072658 -43516630 - AluYa5 SINE Alu -14 297 1 229 259 0 0 chr10 102073241 102073295 -43515993 + MIR SINE MIR 114 167 -95 493 241 37 31 chr10 102073337 102073499 -43515789 - MIR SINE MIR -24 238 76 333 273 23 0 chr10 102073519 102073607 -43515681 + MIR SINE MIR 172 261 -1 381 286 48 0 chr10 102073611 102073716 -43515572 + L2 LINE L2 3194 3303 -10 2147 120 0 3 chr10 102073737 102074078 -43515210 - AluSc SINE Alu 0 340 1 630 324 73 5 chr10 102074340 102074544 -43514744 + MIR SINE MIR 8 225 -37 2193 119 0 0 chr10 102074611 102074921 -43514367 - AluSx SINE Alu -2 310 1 2154 106 17 0 chr10 102074926 102075228 -43514060 - AluSq SINE Alu -6 307 1 1860 153 0 0 chr10 102075388 102075693 -43513595 - AluSx SINE Alu 0 305 1 836 179 19 31 chr10 102075710 102075872 -43513416 + MER63 DNA MER1_type 2 787 -275 441 297 101 34 chr10 102076032 102076241 -43513047 + MIR SINE MIR 40 262 0 2275 85 0 10 chr10 102076558 102076864 -43512424 + AluSp SINE Alu 1 303 -10 2704 187 28 11 chr10 102077292 102077831 -43511457 - L1MB5 LINE L1 -36 6138 5591 182 233 83 17 chr10 102078748 102078808 -43510480 - MIR SINE MIR -50 212 149 2139 104 17 0 chr10 102078894 102079193 -43510095 + AluSc SINE Alu 1 304 -5 1317 56 0 0 chr10 102079409 102079569 -43509719 - L1PA3 LINE L1 -3 6152 5993 2187 122 0 0 chr10 102079995 102080307 -43508981 - AluSx SINE Alu 0 312 1 252 266 187 43 chr10 102080347 102080486 -43508802 - MIR SINE MIR -83 179 21 1336 199 89 3 chr10 102080555 102080857 -43508431 + Charlie4a DNA MER1_type 14 341 -167 1862 87 31 0 chr10 102080861 102081115 -43508173 - AluSx SINE Alu -11 301 40 1774 150 4 4 chr10 102081167 102081447 -43507841 + AluJo SINE Alu 9 288 -24 204 260 24 16 chr10 102081447 102081570 -43507718 + (TA)n Simple_repeat Simple_repeat 1 124 0 366 114 32 211 chr10 102081570 102081606 -43507682 + Charlie4a DNA MER1_type 402 443 -1518 2954 137 2 6 chr10 102081606 102082082 -43507206 + L1MB3 LINE L1 5708 6181 -2 366 114 32 211 chr10 102082082 102082168 -43507120 + Charlie4a DNA MER1_type 443 502 -6 247 302 157 22 chr10 102082287 102082431 -43506857 + MIR SINE MIR 36 192 -57 512 237 67 57 chr10 102082685 102082879 -43506409 + MIR SINE MIR 19 214 -48 2438 68 0 0 chr10 102083228 102083539 -43505749 - AluY SINE Alu 0 311 1 203 184 0 61 chr10 102084271 102084320 -43504968 - MIR SINE MIR -4 258 213 213 65 0 0 chr10 102084320 102084351 -43504937 + (TC)n Simple_repeat Simple_repeat 1 31 0 866 205 41 5 chr10 102084351 102084546 -43504742 - AluJb SINE Alu -26 286 85 1191 86 0 0 chr10 102084553 102084704 -43504584 - AluSx SINE Alu -151 161 11 392 257 125 33 chr10 102084733 102084885 -43504403 - MIR SINE MIR -95 167 2 434 264 193 0 chr10 102085002 102085142 -43504146 + MIR SINE MIR 83 249 -13 340 291 32 69 chr10 102086062 102086251 -43503037 + MER5A DNA MER1_type 8 189 0 21 0 0 0 chr10 102087043 102087064 -43502224 + AT_rich Low_complexity Low_complexity 1 21 0 284 340 21 21 chr10 102087507 102087651 -43501637 - L3 LINE CR1 -26 1551 1408 651 248 139 10 chr10 102087670 102087872 -43501416 + L1MC/D LINE L1 5574 5801 -2007 581 272 120 0 chr10 102087877 102088061 -43501227 - MIR SINE MIR 0 262 57 218 305 248 0 chr10 102088072 102088177 -43501111 - L2 LINE L2 -1 3271 3141 556 198 0 0 chr10 102088179 102088280 -43501008 + AluJb SINE Alu 122 222 -90 367 266 55 33 chr10 102088579 102088793 -43500495 - AluSx SINE Alu -113 189 3 1118 225 96 4 chr10 102088822 102089093 -43500195 + AluJo SINE Alu 2 297 -5 2280 95 3 0 chr10 102089094 102089399 -43499889 + AluSq SINE Alu 1 306 -7 199 375 45 23 chr10 102089705 102089793 -43499495 - L2 LINE L2 -33 3239 3150 1598 188 0 19 chr10 102089889 102090203 -43499085 + AluJo SINE Alu 1 308 -4 1871 112 57 0 chr10 102090203 102090499 -43498789 + AluSp SINE Alu 1 313 0 1632 167 38 0 chr10 102090579 102090872 -43498416 + AluJb SINE Alu 6 309 -3 29 84 0 0 chr10 102091296 102091367 -43497921 + AT_rich Low_complexity Low_complexity 1 71 0 375 283 112 7 chr10 102091719 102091871 -43497417 - MIR3 SINE MIR -33 175 8 355 314 68 0 chr10 102092449 102092567 -43496721 - MIR SINE MIR -114 148 23 1756 141 3 36 chr10 102092926 102093232 -43496056 - AluJb SINE Alu -15 297 2 524 254 10 91 chr10 102093232 102093260 -43496028 - MIR SINE MIR -69 193 164 1765 152 7 3 chr10 102093260 102093557 -43495731 + AluJb SINE Alu 1 298 -14 524 254 10 91 chr10 102093557 102093643 -43495645 - MIR SINE MIR -98 164 99 2050 110 21 0 chr10 102093643 102093934 -43495354 + AluSx SINE Alu 1 297 -15 524 254 10 91 chr10 102093934 102094015 -43495273 - MIR SINE MIR -163 99 13 363 313 117 33 chr10 102094576 102094790 -43494498 - MIR SINE MIR -29 233 2 183 80 0 0 chr10 102095557 102095582 -43493706 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 206 188 0 0 chr10 102095582 102095614 -43493674 - L2 LINE L2 -14 3299 3268 2110 105 3 13 chr10 102095670 102095984 -43493304 + AluSx SINE Alu 1 311 -1 1991 94 7 0 chr10 102096005 102096303 -43492985 + AluSq SINE Alu 4 303 0 226 264 154 70 chr10 102096484 102096685 -43492603 - L2 LINE L2 0 3313 3096 1878 109 77 0 chr10 102097284 102097558 -43491730 - AluSx SINE Alu -17 295 1 786 210 62 26 chr10 102097560 102097755 -43491533 - MIR SINE MIR -48 214 13 1673 149 26 42 chr10 102098462 102098583 -43490705 + AluJb SINE Alu 1 122 -190 2117 105 3 3 chr10 102098583 102098887 -43490401 - AluSx SINE Alu -8 304 1 1673 149 26 42 chr10 102098887 102099074 -43490214 + AluJb SINE Alu 122 304 -8 2518 128 45 53 chr10 102099132 102099600 -43489688 + MLT2C2 LTR ERVL 1 464 0 862 228 41 20 chr10 102100206 102100403 -43488885 - MIR SINE MIR -15 247 47 301 289 0 0 chr10 102100592 102100675 -43488613 + MIR SINE MIR 178 260 -2 1815 108 75 4 chr10 102100710 102100988 -43488300 - AluSx SINE Alu -1 311 14 700 237 0 26 chr10 102101864 102101876 -43487412 - MIR SINE MIR -91 171 160 1747 138 7 20 chr10 102101876 102102199 -43487089 + AluJb SINE Alu 1 312 0 700 237 0 26 chr10 102102199 102102342 -43486946 - MIR SINE MIR -102 160 20 2390 38 0 3 chr10 102102352 102102640 -43486648 - L1PA4 LINE L1 -3 6152 5866 3672 17 0 0 chr10 102102640 102103047 -43486241 + L1PA4 LINE L1 5475 5881 -274 214 272 0 105 chr10 102103105 102103219 -43486069 + MIR SINE MIR 72 173 -89 * 537 253 278 0 chr10 102103194 102103392 -43485896 - MIR SINE MIR 0 262 10 213 234 117 13 chr10 102103496 102103573 -43485715 + MIR SINE MIR 108 192 -70 245 321 53 35 chr10 102104116 102104296 -43484992 + MIR SINE MIR 20 199 -63 2034 127 0 3 chr10 102104301 102104601 -43484687 + AluSx SINE Alu 1 299 -13 285 269 0 54 chr10 102104986 102105079 -43484209 + MIR SINE MIR 59 146 -62 2153 103 3 6 chr10 102105130 102105442 -43483846 + AluSx SINE Alu 1 311 -1 242 295 0 26 chr10 102105465 102105543 -43483745 + MIR SINE MIR 176 251 -11 2213 101 7 3 chr10 102105578 102105886 -43483402 - AluSx SINE Alu -3 309 1 341 302 28 0 chr10 102105925 102106031 -43483257 + L2 LINE L2 3150 3258 -14 183 80 0 0 chr10 102106490 102106515 -43482773 + (T)n Simple_repeat Simple_repeat 1 25 0 302 230 0 40 chr10 102106704 102106778 -43482510 + MIR SINE MIR 98 168 -94 2212 98 0 0 chr10 102106791 102107088 -43482200 + AluSq SINE Alu 1 297 -16 857 177 12 10 chr10 102107379 102107566 -43481722 + L1M3 LINE L1 5411 5607 -576 2091 99 0 0 chr10 102107567 102107851 -43481437 + AluSx SINE Alu 27 310 -2 445 76 15 0 chr10 102107854 102107920 -43481368 + L1MB2 LINE L1 6103 6169 -2 446 317 68 0 chr10 102108109 102108297 -43480991 - MIR SINE MIR -28 234 36 249 239 0 30 chr10 102108498 102108565 -43480723 + MLT1K LTR MaLR 178 242 -346 221 304 88 27 chr10 102109497 102109645 -43479643 + L2 LINE L2 2894 3050 -222 279 289 133 39 chr10 102109861 102109933 -43479355 - MIR SINE MIR -57 205 141 2208 101 0 7 chr10 102109933 102110231 -43479057 - AluSq SINE Alu -15 298 3 279 289 133 39 chr10 102110231 102110338 -43478950 - MIR SINE MIR -121 141 9 1685 81 0 0 chr10 102111424 102111646 -43477642 - AluSc SINE Alu -2 307 86 248 303 45 0 chr10 102111850 102111939 -43477349 - MIR SINE MIR -91 171 79 2269 86 3 3 chr10 102112391 102112693 -43476595 + AluSq SINE Alu 1 302 -11 2339 82 0 0 chr10 102112748 102113051 -43476237 + AluSg SINE Alu 1 303 -7 43 35 0 0 chr10 102113300 102113357 -43475931 + AT_rich Low_complexity Low_complexity 1 57 0 262 246 0 18 chr10 102113387 102113444 -43475844 - L3 LINE CR1 -3 1574 1519 1504 157 44 27 chr10 102113744 102114037 -43475251 + AluJo SINE Alu 15 312 0 1068 95 0 0 chr10 102114320 102114467 -43474821 - AluSg/x SINE Alu -10 302 156 197 294 59 44 chr10 102114685 102114753 -43474535 + L2 LINE L2 3208 3276 -37 274 317 219 6 chr10 102114782 102114946 -43474342 - MIR3 SINE MIR 0 208 10 659 192 8 8 chr10 102115450 102115575 -43473713 + FLAM_C SINE Alu 1 125 -18 23 0 0 0 chr10 102115575 102115598 -43473690 + AT_rich Low_complexity Low_complexity 1 23 0 2240 107 0 0 chr10 102115649 102115957 -43473331 - AluSx SINE Alu -4 308 1 21 0 0 0 chr10 102116399 102116420 -43472868 + AT_rich Low_complexity Low_complexity 1 21 0 673 116 21 0 chr10 102116420 102116515 -43472773 - FRAM SINE Alu -50 126 30 486 234 65 52 chr10 102116558 102116712 -43472576 - MIR3 SINE MIR -39 169 14 558 99 0 0 chr10 102117994 102118085 -43471203 + (TA)n Simple_repeat Simple_repeat 2 92 0 2082 69 0 32 chr10 102118371 102118648 -43470640 - AluSc SINE Alu 0 309 42 359 140 0 0 chr10 102118701 102118758 -43470530 + MIR SINE MIR 93 149 -113 381 235 26 35 chr10 102119238 102119353 -43469935 - L1ME3A LINE L1 -94 6076 5963 2173 99 17 0 chr10 102119348 102119642 -43469646 - AluSq SINE Alu -14 299 1 210 259 19 0 chr10 102119782 102119836 -43469452 + (CATA)n Simple_repeat Simple_repeat 3 57 0 1364 266 62 31 chr10 102119847 102120006 -43469282 - L1ME3A LINE L1 -224 5946 5793 2369 93 0 0 chr10 102120006 102120307 -43468981 - AluSg SINE Alu -9 301 1 1364 266 62 31 chr10 102120307 102120661 -43468627 - L1ME3A LINE L1 -377 5793 5417 1510 196 75 7 chr10 102120770 102121051 -43468237 + AluJb SINE Alu 3 302 -10 655 226 0 0 chr10 102121066 102121199 -43468089 + FLAM_A SINE Alu 8 140 -2 956 243 54 12 chr10 102121208 102121622 -43467666 + L1ME LINE L1 5042 5552 -612 766 294 20 13 chr10 102121628 102121927 -43467361 - L1ME3A LINE L1 -1893 4253 3953 1053 157 12 12 chr10 102121935 102122107 -43467181 - FAM SINE Alu 0 49 1 862 276 55 36 chr10 102122114 102122228 -43467060 - L1ME3A LINE L1 -2165 3981 3871 2197 118 10 0 chr10 102122228 102122525 -43466763 - AluSx SINE Alu -12 300 1 862 276 55 36 chr10 102122525 102122831 -43466457 - L1ME3A LINE L1 -2275 3871 3553 1736 147 48 0 chr10 102122895 102123167 -43466121 + AluJo SINE Alu 6 290 -22 1359 230 118 59 chr10 102123177 102123617 -43465671 - HAL1 LINE L1 -52 2455 2043 333 0 0 0 chr10 102123617 102123654 -43465634 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 1755 161 14 4 chr10 102123656 102123936 -43465352 - AluJb SINE Alu -29 283 1 1359 230 118 59 chr10 102123936 102124327 -43464961 - HAL1 LINE L1 -464 2043 1522 1259 270 102 10 chr10 102124495 102124887 -43464401 + LTR16A LTR ERVL 18 445 -5 407 212 47 0 chr10 102124896 102124981 -43464307 + HERV16 LTR ERVL 4 92 -4904 2528 263 82 33 chr10 102125041 102125959 -43463329 + HERV16 LTR ERVL 194 1156 -3840 258 251 214 65 chr10 102126793 102127008 -43462280 - L2 LINE L2 -6 3266 3020 735 238 72 27 chr10 102127219 102127442 -43461846 - MIR SINE MIR -10 252 20 793 118 0 131 chr10 102127594 102127747 -43461541 + FLAM_C SINE Alu 1 133 0 249 325 131 46 chr10 102128209 102128538 -43460750 - L2 LINE L2 -43 3229 2873 1861 158 48 3 chr10 102128778 102129157 -43460131 - Charlie5 DNA MER1_type 0 2624 2229 808 175 12 24 chr10 102129194 102129360 -43459928 - MER3 DNA MER1_type -55 154 3 533 217 0 0 chr10 102130439 102130554 -43458734 - FLAM_C SINE Alu -27 116 2 535 294 49 5 chr10 102130562 102130746 -43458542 - MIR SINE MIR -70 192 1 1515 115 4 100 chr10 102131043 102131322 -43457966 + AluJo SINE Alu 25 276 -36 242 115 250 0 chr10 102132105 102132157 -43457131 - MIR SINE MIR -111 151 87 2514 81 0 0 chr10 102132435 102132742 -43456546 - AluSx SINE Alu -5 307 1 2239 78 0 11 chr10 102133012 102133295 -43455993 + AluSx SINE Alu 1 280 -32 180 179 0 0 chr10 102133318 102133357 -43455931 + A-rich Low_complexity Low_complexity 1 39 0 256 301 39 53 chr10 102133862 102134068 -43455220 + L2 LINE L2 3104 3306 -7 272 243 29 73 chr10 102134644 102134694 -43454594 - L1ME3A LINE L1 -20 6150 6099 2288 110 0 0 chr10 102134694 102134995 -43454293 - AluSg SINE Alu -9 301 1 272 243 29 73 chr10 102134995 102135080 -43454208 - L1ME3A LINE L1 -71 6099 6021 926 185 0 6 chr10 102135937 102136099 -43453189 - FRAM SINE Alu -15 161 1 2036 104 76 3 chr10 102136582 102136871 -43452417 + AluSx SINE Alu 1 310 -2 835 315 121 42 chr10 102137033 102137646 -43451642 - L3 LINE CR1 -127 1450 790 25 51 0 0 chr10 102137648 102137687 -43451601 + AT_rich Low_complexity Low_complexity 1 39 0 280 300 50 10 chr10 102139003 102139103 -43450185 + MIR SINE MIR 20 123 -139 326 215 198 25 chr10 102139179 102139300 -43449988 + MIR SINE MIR 118 259 -3 2280 115 0 0 chr10 102139366 102139661 -43449627 + AluSx SINE Alu 1 295 -17 28 50 0 17 chr10 102139967 102139985 -43449303 + AT_rich Low_complexity Low_complexity 1 18 -41 2194 123 10 0 chr10 102139985 102140287 -43449001 - AluSx SINE Alu -7 305 1 28 50 0 17 chr10 102140287 102140328 -43448960 + AT_rich Low_complexity Low_complexity 18 59 0 1005 262 128 3 chr10 102140378 102140729 -43448559 - MLT1J2 LTR MaLR -34 416 22 294 136 0 0 chr10 102141027 102141071 -43448217 - Alu SINE Alu -10 292 249 1071 65 0 0 chr10 102141071 102141194 -43448094 - AluSq/x SINE Alu -176 136 14 1577 99 63 5 chr10 102141195 102141417 -43447871 - AluSg SINE Alu -75 235 1 2240 111 0 19 chr10 102141742 102142049 -43447239 - AluSx SINE Alu -11 301 1 2111 119 20 3 chr10 102142401 102142696 -43446592 - AluSx SINE Alu -11 301 2 2157 116 6 16 chr10 102142811 102143122 -43446166 - AluSx SINE Alu -4 308 1 742 275 98 65 chr10 102143780 102144177 -43445111 + L2 LINE L2 2854 3263 -50 422 216 29 10 chr10 102144539 102144641 -43444647 - MER5A DNA MER1_type -84 105 2 2146 127 0 0 chr10 102144644 102144961 -43444327 - AluSx SINE Alu 0 317 1 386 200 8 173 chr10 102145509 102145764 -43443524 - L1MC4 LINE L1 -3 8039 7827 688 100 0 0 chr10 102145766 102145856 -43443432 - 5S rRNA rRNA -31 90 1 435 276 15 8 chr10 102145856 102145990 -43443298 - L1MC4 LINE L1 -202 7840 7706 2353 91 0 3 chr10 102146113 102146411 -43442877 - AluSg SINE Alu -11 299 3 246 32 0 0 chr10 102146425 102146456 -43442832 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 2227 117 7 0 chr10 102146480 102146779 -43442509 + AluSg SINE Alu 1 301 -9 219 139 0 0 chr10 102147300 102147336 -43441952 + (CA)n Simple_repeat Simple_repeat 1 36 0 346 231 0 44 chr10 102147375 102147423 -43441865 - MER53 DNA DNA -89 100 56 2269 101 0 26 chr10 102147423 102147730 -43441558 - AluSx SINE Alu -13 299 1 346 231 0 44 chr10 102147730 102147772 -43441516 - MER53 DNA DNA -133 56 14 405 0 0 0 chr10 102147791 102147836 -43441452 + (CA)n Simple_repeat Simple_repeat 2 46 0 2661 154 12 2 chr10 102148223 102148645 -43440643 + MSTB LTR MaLR 1 426 0 2367 76 0 13 chr10 102149155 102149457 -43439831 - AluSc SINE Alu -10 299 2 2358 113 0 0 chr10 102149524 102149825 -43439463 + AluSx SINE Alu 1 301 -11 2308 110 0 13 chr10 102150240 102150557 -43438731 - AluSq SINE Alu 0 313 1 2124 131 3 10 chr10 102150958 102151272 -43438016 - AluSx SINE Alu 0 312 1 1776 199 3 0 chr10 102151330 102151637 -43437651 + AluJo SINE Alu 1 308 -4 216 291 163 12 chr10 102152014 102152100 -43437188 + L2 LINE L2 3214 3312 -1 2148 105 3 7 chr10 102152375 102152683 -43436605 - AluSp SINE Alu 0 307 1 25 51 0 0 chr10 102152925 102152964 -43436324 + AT_rich Low_complexity Low_complexity 1 39 0 2404 94 3 3 chr10 102153369 102153678 -43435610 + AluSx SINE Alu 1 309 -3 381 220 53 8 chr10 102153823 102153955 -43435333 - L1MEc LINE L1 -4452 1944 1807 378 201 19 17 chr10 102154532 102154694 -43434594 - MER20 DNA MER1_type 0 219 2 202 287 147 39 chr10 102154697 102154826 -43434462 + MIR3 SINE MIR 53 195 -13 1055 167 254 4 chr10 102154899 102155147 -43434141 + AluJb SINE Alu 1 305 0 23 0 0 0 chr10 102155692 102155715 -43433573 + AT_rich Low_complexity Low_complexity 1 23 0 2313 180 62 0 chr10 102157139 102157590 -43431698 + MER31A LTR ERV1 1 479 -6 207 0 0 0 chr10 102158605 102158628 -43430660 + (CCTG)n Simple_repeat Simple_repeat 4 26 0 477 223 45 0 chr10 102158833 102158945 -43430343 + MIR SINE MIR 104 220 -42 2378 86 0 0 chr10 102159353 102159643 -43429645 + AluSc SINE Alu 1 290 -19 602 214 175 39 chr10 102159666 102159895 -43429393 + L2 LINE L2 3054 3313 0 1168 139 0 0 chr10 102160608 102160773 -43428515 - AluSg/x SINE Alu -14 298 134 2387 97 0 3 chr10 102160773 102161084 -43428204 - AluSg SINE Alu 0 310 1 441 0 0 0 chr10 102161219 102161268 -43428020 + (CA)n Simple_repeat Simple_repeat 2 50 0 366 256 35 35 chr10 102161335 102161507 -43427781 + MIR SINE MIR 67 238 -24 514 187 47 132 chr10 102161970 102162102 -43427186 - L1MEc LINE L1 -5333 1063 958 2102 106 3 10 chr10 102162102 102162394 -43426894 + AluSx SINE Alu 1 290 -22 514 187 47 132 chr10 102162394 102162496 -43426792 - L1MEc LINE L1 -5438 958 849 410 197 124 26 chr10 102162509 102162660 -43426628 - L1MEc LINE L1 -5817 579 358 223 28 56 0 chr10 102162662 102162698 -43426590 + (TC)n Simple_repeat Simple_repeat 1 38 0 246 32 0 0 chr10 102162698 102162729 -43426559 + (TG)n Simple_repeat Simple_repeat 2 32 0 878 247 72 28 chr10 102162730 102163021 -43426267 - L1MEc LINE L1 -6027 369 66 471 236 29 21 chr10 102163058 102163198 -43426090 - MIR SINE MIR -120 142 2 608 232 107 0 chr10 102163468 102163636 -43425652 - L2 LINE L2 0 3313 3128 269 175 18 18 chr10 102163881 102163938 -43425350 - L2 LINE L2 -334 2979 2923 459 251 221 5 chr10 102164413 102164612 -43424676 + MIR SINE MIR 2 243 -19 1825 146 46 0 chr10 102165957 102166238 -43423050 - AluSx SINE Alu -18 294 1 2420 181 110 25 chr10 102166432 102166952 -43422336 + LTR6A LTR ERV1 1 564 0 864 252 107 30 chr10 102167087 102167461 -43421827 + L2 LINE L2 2616 3021 -251 228 204 67 167 chr10 102167509 102167749 -43421539 + L2 LINE L2 3008 3223 -90 2432 89 0 0 chr10 102167933 102168224 -43421064 + AluSx SINE Alu 1 291 -21 1444 175 45 29 chr10 102168282 102168591 -43420697 + MER33 DNA MER1_type 6 319 -5 923 121 0 0 chr10 102168887 102169011 -43420277 - FLAM_C SINE Alu -9 124 1 1874 132 0 42 chr10 102169214 102169332 -43419956 + AluSx SINE Alu 19 140 -172 2315 112 0 0 chr10 102169332 102169637 -43419651 + AluSg SINE Alu 1 305 -5 1874 132 0 42 chr10 102169637 102169806 -43419482 + AluSx SINE Alu 140 294 -18 440 227 91 9 chr10 102169811 102169921 -43419367 + MER94 DNA DNA 13 131 -3 2155 112 42 0 chr10 102170278 102170564 -43418724 + AluSx SINE Alu 1 298 -14 294 224 0 0 chr10 102171077 102171135 -43418153 + MER117 DNA MER1_type 103 160 -37 1882 78 41 22 chr10 102171663 102171933 -43417355 + L1PA3 LINE L1 5879 6153 -2 1284 131 0 26 chr10 102172337 102172391 -43416897 - AluSx SINE Alu -126 186 132 2350 96 0 0 chr10 102172391 102172682 -43416606 - AluSg SINE Alu -19 291 1 1284 131 0 26 chr10 102172682 102172818 -43416470 - AluSx SINE Alu -180 132 1 1419 191 84 4 chr10 102172846 102173119 -43416169 + AluJo SINE Alu 3 297 -15 1557 101 14 0 chr10 102173120 102173327 -43415961 + AluSx SINE Alu 1 210 -102 2114 104 14 0 chr10 102173442 102173729 -43415559 + AluSx SINE Alu 6 296 -16 2330 65 41 0 chr10 102173731 102174025 -43415263 + AluSq SINE Alu 1 306 -7 878 155 88 88 chr10 102175291 102175438 -43413850 - MLT1C LTR MaLR -236 231 82 1963 121 50 0 chr10 102175438 102175718 -43413570 - AluSx SINE Alu -18 294 1 878 155 88 88 chr10 102175718 102175796 -43413492 - MLT1C LTR MaLR -384 83 6 271 307 73 22 chr10 102175910 102176047 -43413241 - LTR16B LTR ERVL -2 462 319 313 182 23 159 chr10 102176182 102176256 -43413032 - LTR16A LTR ERVL -336 114 64 2209 112 3 0 chr10 102176256 102176560 -43412728 - AluSq SINE Alu -8 305 1 313 182 23 159 chr10 102176560 102176617 -43412671 - LTR16A LTR ERVL -386 64 1 209 271 47 65 chr10 102177503 102177610 -43411678 - MIR SINE MIR -34 228 124 222 37 0 0 chr10 102177943 102177970 -43411318 + (TC)n Simple_repeat Simple_repeat 2 28 0 278 281 108 27 chr10 102177979 102178164 -43411124 - HAL1 LINE L1 -6 2501 2302 339 311 236 20 chr10 102178757 102179101 -43410187 - L2 LINE L2 -8 3305 2888 240 277 69 62 chr10 102179373 102179503 -43409785 + MIR SINE MIR 82 212 -50 21 0 0 0 chr10 102179539 102179560 -43409728 + AT_rich Low_complexity Low_complexity 1 21 0 2238 128 0 0 chr10 102179633 102179937 -43409351 - AluSx SINE Alu -8 304 1 2302 113 0 3 chr10 102181633 102181944 -43407344 + AluSg SINE Alu 1 310 0 43895 47 7 1 chr10 102182461 102188580 -43400708 + L1PA4 LINE L1 1 6155 0 1848 159 6 48 chr10 102189068 102189382 -43399906 + AluJb SINE Alu 1 301 -11 587 179 0 0 chr10 102190692 102190815 -43398473 + L1M4 LINE L1 5172 5294 -852 496 274 38 39 chr10 102191866 102192096 -43397192 - MIR SINE MIR -34 228 2 427 219 37 62 chr10 102192182 102192341 -43396947 - L1ME2 LINE L1 -16 6146 5978 1885 170 3 3 chr10 102192348 102192660 -43396628 - AluJo SINE Alu 0 312 1 1243 220 118 26 chr10 102192751 102193101 -43396187 - L1M4 LINE L1 -1388 4758 4355 2244 119 0 0 chr10 102193101 102193395 -43395893 + AluSx SINE Alu 1 294 -18 1243 220 118 26 chr10 102193395 102193503 -43395785 - L1M4 LINE L1 -1791 4355 4258 402 165 82 0 chr10 102193544 102193629 -43395659 - MER33 DNA MER1_type 0 363 272 1770 156 6 51 chr10 102193630 102193945 -43395343 + AluJb SINE Alu 11 311 -1 754 175 0 7 chr10 102193972 102194109 -43395179 + AluJb SINE Alu 1 136 -176 1051 151 78 50 chr10 102194117 102194359 -43394929 - MER33 DNA MER1_type -87 237 1 393 247 57 57 chr10 102194359 102194658 -43394630 - L1ME LINE L1 -4889 1534 1281 717 246 34 0 chr10 102194750 102194925 -43394363 - L1ME LINE L1 -5884 1047 867 233 148 37 19 chr10 102194942 102194996 -43394292 + T-rich Low_complexity Low_complexity 3 57 0 2430 86 3 10 chr10 102195363 102195677 -43393611 - AluSp SINE Alu -1 312 1 205 329 161 22 chr10 102196054 102196191 -43393097 - L2 LINE L2 -5 3267 3112 37132 95 10 12 chr10 102196471 102198671 -43390617 + L1PA7 LINE L1 13 2216 -3938 2112 103 32 0 chr10 102198671 102198952 -43390336 + AluY SINE Alu 1 290 -21 37132 95 10 12 chr10 102198952 102202907 -43386381 + L1PA7 LINE L1 2216 6154 0 2293 83 7 7 chr10 102203125 102203426 -43385862 - AluSq SINE Alu -12 301 1 369 254 119 41 chr10 102203587 102203831 -43385457 - MER102b DNA MER1_type -24 317 55 217 207 0 17 chr10 102204126 102204184 -43385104 - MIR3 SINE MIR -1 207 151 308 261 87 80 chr10 102204215 102204353 -43384935 + MER5A DNA MER1_type 51 189 0 275 240 60 0 chr10 102204355 102204455 -43384833 - MIR SINE MIR -63 145 40 185 365 24 0 chr10 102205125 102205210 -43384078 - L2 LINE L2 -9 3263 3177 1439 138 28 104 chr10 102205637 102205842 -43383446 - AluJo SINE Alu -1 311 137 2424 73 3 3 chr10 102205842 102206144 -43383144 - AluYa5 SINE Alu -9 302 1 1439 138 28 104 chr10 102206144 102206256 -43383032 - AluJo SINE Alu -175 137 18 816 148 0 23 chr10 102206644 102206772 -43382516 - FLAM_C SINE Alu -18 125 1 232 281 37 24 chr10 102206879 102206961 -43382327 + MIR SINE MIR 86 168 -94 2152 131 7 0 chr10 102206981 102207279 -43382009 + AluSq SINE Alu 1 300 -13 593 303 52 9 chr10 102207309 102207540 -43381748 - MIR SINE MIR -16 246 6 407 222 0 13 chr10 102208133 102208232 -43381056 - MLT1I LTR MaLR 0 450 319 2320 96 0 29 chr10 102208330 102208642 -43380646 - AluSq SINE Alu -10 303 1 407 186 147 23 chr10 102208652 102208781 -43380507 - MLT1J2 LTR MaLR -272 178 34 229 158 0 0 chr10 102208964 102209002 -43380286 + MER4D LTR ERV1 279 316 -587 * 346 261 92 25 chr10 102208973 102209092 -43380196 + MER34B LTR ERV1 5 131 -434 186 270 0 0 chr10 102209093 102209156 -43380132 + (TGGG)n Simple_repeat Simple_repeat 2 64 0 * 588 244 0 0 chr10 102209149 102209329 -43379959 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 215 265 0 0 chr10 102209329 102209378 -43379910 + (TGGG)n Simple_repeat Simple_repeat 4 52 0 388 210 70 112 chr10 102209490 102209576 -43379712 + MER34B LTR ERV1 320 408 -157 2007 148 21 0 chr10 102209576 102209866 -43379422 - AluJb SINE Alu -14 298 3 388 210 70 112 chr10 102209866 102209993 -43379295 + MER34B LTR ERV1 408 524 -41 2150 103 10 3 chr10 102210515 102210806 -43378482 + AluSp SINE Alu 1 293 -20 355 106 0 0 chr10 102210974 102211048 -43378240 - Alu SINE Alu 0 308 235 262 68 114 0 chr10 102211042 102211086 -43378202 + MADE1 DNA Mariner 31 79 -1 * 401 228 81 16 chr10 102211103 102211226 -43378062 - MLT1F LTR MaLR -10 532 402 244 167 0 62 chr10 102211243 102211291 -43377997 - MLT1E LTR MaLR -389 206 162 2133 97 0 44 chr10 102211293 102211622 -43377666 - AluSp SINE Alu 0 316 1 2019 97 0 0 chr10 102211634 102211892 -43377396 - AluSq SINE Alu -25 288 31 295 319 0 26 chr10 102211904 102212017 -43377271 - MLT1E LTR MaLR -473 120 11 205 364 0 0 chr10 102212202 102212279 -43377009 - MIR SINE MIR -115 147 71 250 219 125 0 chr10 102212531 102212595 -43376693 + L1ME4a LINE L1 5530 5601 -520 213 211 0 0 chr10 102212806 102212844 -43376444 + (CA)n Simple_repeat Simple_repeat 1 38 0 519 248 72 60 chr10 102212954 102213186 -43376102 + L1ME4a LINE L1 5791 6030 -91 2392 92 0 3 chr10 102213186 102213492 -43375796 - AluSg SINE Alu -5 305 1 519 248 72 60 chr10 102213492 102213578 -43375710 + L1ME4a LINE L1 6030 6113 -8 197 261 36 62 chr10 102213687 102213860 -43375428 - MIR SINE MIR -27 235 41 464 269 126 58 chr10 102214044 102214338 -43374950 + MLT1K LTR MaLR 214 527 -61 264 305 0 0 chr10 102214338 102214397 -43374891 + polypyrimidine Low_complexity Low_complexity 1 59 0 473 219 75 53 chr10 102214455 102214612 -43374676 + MIR SINE MIR 101 260 -2 2374 97 7 3 chr10 102214653 102214963 -43374325 + AluSx SINE Alu 2 312 0 312 27 0 0 chr10 102215180 102215217 -43374071 + (TG)n Simple_repeat Simple_repeat 2 38 0 306 0 0 0 chr10 102215508 102215542 -43373746 + (CA)n Simple_repeat Simple_repeat 2 35 0 620 259 169 34 chr10 102215542 102215945 -43373343 - LTR67 LTR ERVL -33 524 62 183 80 0 0 chr10 102216022 102216047 -43373241 + (TG)n Simple_repeat Simple_repeat 1 25 0 258 193 0 0 chr10 102216349 102216406 -43372882 + (TGGA)n Simple_repeat Simple_repeat 4 60 0 180 178 96 82 chr10 102216511 102216584 -43372704 - MIR3 SINE MIR -26 182 109 1235 114 0 0 chr10 102217382 102217549 -43371739 - AluSg/x SINE Alu 0 312 146 2059 90 87 3 chr10 102217685 102217973 -43371315 - AluSx SINE Alu 0 312 1 425 274 9 0 chr10 102217984 102218090 -43371198 - MIR SINE MIR -109 153 47 2279 112 0 0 chr10 102219026 102219321 -43369967 - AluSx SINE Alu -17 295 1 228 135 0 0 chr10 102219542 102219579 -43369709 + (A)n Simple_repeat Simple_repeat 1 37 0 260 241 27 71 chr10 102220086 102220198 -43369090 - LTR67 LTR ERVL -14 543 437 189 0 0 0 chr10 102220298 102220319 -43368969 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2183 101 0 4 chr10 102220322 102220599 -43368689 - AluSc SINE Alu -33 276 1 2449 101 0 0 chr10 102220610 102220917 -43368371 - AluSg SINE Alu -3 307 1 3323 164 23 76 chr10 102221341 102222068 -43367220 - LTR8 LTR ERV1 0 691 3 287 287 74 8 chr10 102222195 102222317 -43366971 + MER91A DNA MER1_type 22 151 -45 228 167 0 0 chr10 102222982 102223030 -43366258 + (CAGA)n Simple_repeat Simple_repeat 2 49 0 1586 140 98 11 chr10 102223122 102223540 -43365748 + AluSx SINE Alu 14 312 0 1259 134 27 45 chr10 102224047 102224270 -43365018 - MER20 DNA MER1_type 0 219 1 344 215 0 15 chr10 102224273 102224338 -43364950 + MIR SINE MIR 12 75 -187 299 191 29 0 chr10 102224373 102224441 -43364847 + MER94 DNA DNA 2 71 -63 1784 168 7 4 chr10 102224453 102224756 -43364532 + AluJo SINE Alu 2 305 0 661 216 15 17 chr10 102224848 102225009 -43364279 - MIR SINE MIR -36 172 64 1492 183 117 92 chr10 102225051 102225313 -43363975 + MER119 DNA MER1_type 85 339 -244 1599 184 17 34 chr10 102225313 102225606 -43363682 - AluJo SINE Alu -24 288 1 1492 183 117 92 chr10 102225606 102225647 -43363641 + MER119 DNA MER1_type 339 378 -205 2154 96 3 14 chr10 102225647 102225939 -43363349 + AluSx SINE Alu 24 312 0 1492 183 117 92 chr10 102225939 102226121 -43363167 + MER119 DNA MER1_type 378 583 0 282 182 0 0 chr10 102226261 102226327 -43362961 + CT-rich Low_complexity Low_complexity 1 66 0 2076 123 0 3 chr10 102226658 102226966 -43362322 - AluSx SINE Alu 0 307 1 262 211 78 9 chr10 102227214 102227300 -43361988 + MIR SINE MIR 61 152 -56 408 263 204 0 chr10 102227502 102227654 -43361634 - MIR SINE MIR -10 252 70 335 210 109 42 chr10 102229078 102229197 -43360091 - MIR SINE MIR -48 214 88 223 302 116 31 chr10 102229301 102229430 -43359858 + MIR3 SINE MIR 20 159 -49 27 0 0 65 chr10 102231242 102231265 -43358023 + AT_rich Low_complexity Low_complexity 1 21 -22 2175 127 0 0 chr10 102231265 102231557 -43357731 + AluSx SINE Alu 3 294 -18 27 0 0 65 chr10 102231557 102231579 -43357709 + AT_rich Low_complexity Low_complexity 21 43 0 195 69 0 0 chr10 102231646 102231675 -43357613 + (TC)n Simple_repeat Simple_repeat 2 30 0 207 0 0 0 chr10 102231675 102231698 -43357590 + (CA)n Simple_repeat Simple_repeat 1 23 0 567 293 65 39 chr10 102232294 102232523 -43356765 + MIR SINE MIR 28 262 0 185 133 0 0 chr10 102232769 102232799 -43356489 - L2 LINE L2 -3 3269 3240 346 359 101 25 chr10 102233539 102233857 -43355431 - L2 LINE L2 -6 3266 2925 220 317 126 12 chr10 102234236 102234403 -43354885 - L2 LINE L2 -975 2339 2154 276 224 129 34 chr10 102235401 102235548 -43353740 - L1ME4a LINE L1 -2 6119 5959 202 204 0 0 chr10 102235557 102235601 -43353687 + (TG)n Simple_repeat Simple_repeat 2 45 0 2327 80 0 38 chr10 102236093 102236406 -43352882 + AluSc SINE Alu 1 301 -8 200 154 0 26 chr10 102236516 102236555 -43352733 + L2 LINE L2 3276 3313 0 252 268 28 0 chr10 102237195 102237266 -43352022 + MIR3 SINE MIR 108 180 -28 203 259 111 37 chr10 102237763 102237844 -43351444 - L3 LINE CR1 -2 1575 1489 274 224 75 0 chr10 102238152 102238259 -43351029 - L1ME4a LINE L1 -202 5919 5805 468 224 160 19 chr10 102238344 102238500 -43350788 - L1ME3A LINE L1 0 6170 5993 183 352 14 0 chr10 102239046 102239117 -43350171 + MIR SINE MIR 190 261 -1 212 271 0 0 chr10 102239166 102239214 -43350074 - L2 LINE L2 -4 3309 3262 701 176 18 4 chr10 102239235 102239366 -43349922 - MIR SINE MIR -69 139 10 199 297 90 48 chr10 102239346 102239491 -43349797 - L2 LINE L2 0 3272 3122 * 2328 108 3 0 chr10 102239621 102239928 -43349360 + AluSq SINE Alu 1 308 -5 695 258 35 15 chr10 102239988 102240186 -43349102 + MIR SINE MIR 48 249 -13 1150 259 174 11 chr10 102240771 102241208 -43348080 + L2 LINE L2 2804 3311 -2 376 283 75 9 chr10 102241263 102241369 -43347919 + MIR SINE MIR 16 128 -80 430 189 56 0 chr10 102241979 102242069 -43347219 + MER103 DNA DNA 19 113 -53 400 278 87 0 chr10 102242564 102242679 -43346609 + L2 LINE L2 3189 3313 0 281 268 79 39 chr10 102243174 102243301 -43345987 - MER5A DNA MER1_type -13 176 45 256 278 113 26 chr10 102243394 102243509 -43345779 + MIR SINE MIR 73 197 -65 2464 92 3 0 chr10 102243749 102244053 -43345235 + AluSp SINE Alu 1 305 -8 2215 150 16 13 chr10 102244208 102244581 -43344707 - THE1C LTR MaLR 0 375 2 2437 55 0 45 chr10 102244607 102244918 -43344370 + AluY SINE Alu 1 297 -14 841 272 43 0 chr10 102245110 102245345 -43343943 + MIR SINE MIR 7 251 -11 550 278 53 34 chr10 102245835 102246044 -43343244 + MIR SINE MIR 36 248 -14 2134 120 3 7 chr10 102246194 102246494 -43342794 - AluSx SINE Alu -13 299 1 2381 101 20 76 chr10 102247559 102247956 -43341332 + THE1C LTR MaLR 1 375 0 226 247 13 26 chr10 102248077 102248154 -43341134 + L1MC/D LINE L1 5813 5888 -1920 2293 102 0 16 chr10 102249290 102249595 -43339693 + AluSq SINE Alu 1 300 -13 23 0 0 0 chr10 102249652 102249675 -43339613 + AT_rich Low_complexity Low_complexity 1 23 0 438 259 42 42 chr10 102250011 102250177 -43339111 - L2 LINE L2 -7 3306 3141 923 171 0 7 chr10 102250186 102250338 -43338950 - FRAM SINE Alu -27 149 1 217 312 151 37 chr10 102250338 102250556 -43338732 - L2 LINE L2 -143 3170 2928 1227 266 147 37 chr10 102250660 102251328 -43337960 - L2 LINE L2 -470 2844 2104 252 222 0 0 chr10 102251349 102251394 -43337894 + L2 LINE L2 3258 3302 -11 3351 153 32 44 chr10 102251575 102252194 -43337094 - LTR9 LTR ERV1 0 612 1 329 324 40 29 chr10 102252470 102252643 -43336645 - MIR SINE MIR -65 197 23 341 237 85 42 chr10 102254023 102254141 -43335147 + MIR SINE MIR 28 150 -112 2169 140 0 6 chr10 102254290 102254604 -43334684 - AluSx SINE Alu 0 312 1 1756 184 13 7 chr10 102256344 102256653 -43332635 + AluJo SINE Alu 1 311 -1 738 305 46 4 chr10 102256764 102257003 -43332285 - MIR SINE MIR -13 249 1 594 289 5 36 chr10 102258524 102258718 -43330570 - MER5A DNA MER1_type 0 189 2 561 272 54 7 chr10 102258858 102259005 -43330283 - MIR SINE MIR -4 258 105 405 268 43 36 chr10 102259551 102259689 -43329599 + MIR3 SINE MIR 69 207 -1 720 286 52 12 chr10 102259717 102259965 -43329323 - MIR SINE MIR -1 261 4 2007 138 6 13 chr10 102260455 102260767 -43328521 + AluJo SINE Alu 3 312 0 317 289 106 0 chr10 102261007 102261111 -43328177 + MIR SINE MIR 30 144 -64 21 57 0 0 chr10 102262322 102262357 -43326931 + GC_rich Low_complexity Low_complexity 1 35 0 252 122 0 0 chr10 102262586 102262627 -43326661 + (CACCC)n Simple_repeat Simple_repeat 4 44 0 453 315 79 6 chr10 102264258 102264436 -43324852 - L3 LINE CR1 -20 1557 1367 258 254 119 8 chr10 102264854 102264972 -43324316 + L1ME4a LINE L1 5991 6121 0 345 270 0 54 chr10 102265556 102265667 -43323621 + MLT1J2 LTR MaLR 339 443 -7 641 193 53 106 chr10 102266696 102266814 -43322474 + MIR SINE MIR 67 171 -91 2389 80 3 0 chr10 102266814 102267103 -43322185 + AluSp SINE Alu 1 290 -23 641 193 53 106 chr10 102267103 102267191 -43322097 + MIR SINE MIR 171 262 0 5460 121 44 14 chr10 102267526 102268766 -43320522 + L1PA16 LINE L1 4899 6165 -1 1433 219 88 26 chr10 102269006 102269349 -43319939 - MLT1A1 LTR MaLR 0 365 2 2356 64 3 7 chr10 102271548 102271843 -43317445 - AluY SINE Alu -17 294 1 2346 104 10 0 chr10 102271846 102272155 -43317133 - AluSq SINE Alu -1 312 1 21 57 0 0 chr10 102272214 102272249 -43317039 + AT_rich Low_complexity Low_complexity 1 35 0 3311 146 35 3 chr10 102272268 102273051 -43316237 - L1MB1 LINE L1 -339 5829 5025 2449 75 0 3 chr10 102273292 102273598 -43315690 + AluY SINE Alu 1 305 -6 1949 170 3 0 chr10 102273732 102274043 -43315245 - AluJb SINE Alu 0 312 1 293 253 50 20 chr10 102274292 102274391 -43314897 - L2 LINE L2 0 3313 3212 801 260 72 87 chr10 102274418 102274833 -43314455 + MLT1I LTR MaLR 1 409 0 1818 150 0 37 chr10 102274868 102275184 -43314104 + AluJo SINE Alu 6 312 0 644 218 106 48 chr10 102275214 102275402 -43313886 + MIR SINE MIR 51 249 -13 335 271 23 46 chr10 102276018 102276154 -43313134 - MIR3 SINE MIR -9 199 64 410 321 0 48 chr10 102276267 102276435 -43312853 - MER5B DNA MER1_type -17 161 2 182 188 0 0 chr10 102276920 102276952 -43312336 - MIR3 SINE MIR -23 185 154 1521 278 85 15 chr10 102277054 102277514 -43311774 + MLT1K LTR MaLR 11 502 -86 225 0 0 0 chr10 102277801 102277826 -43311462 + (A)n Simple_repeat Simple_repeat 1 25 0 399 41 0 0 chr10 102277826 102277875 -43311413 + (TA)n Simple_repeat Simple_repeat 1 49 0 289 276 181 8 chr10 102278432 102278559 -43310729 + MIR SINE MIR 38 186 -76 339 288 189 7 chr10 102278565 102278718 -43310570 - MIR SINE MIR -73 189 9 298 277 62 54 chr10 102278883 102278995 -43310293 + L2 LINE L2 3186 3298 -15 457 248 198 6 chr10 102279165 102279322 -43309966 + MIR SINE MIR 65 251 -11 240 268 61 12 chr10 102280543 102280625 -43308663 + MER5C DNA MER1_type 5 90 -234 193 211 88 0 chr10 102280651 102280708 -43308580 + MER5C DNA MER1_type 208 269 -55 310 167 15 0 chr10 102280839 102280905 -43308383 + L1MDa LINE L1 1402 1468 -5072 2679 89 31 14 chr10 102281071 102281429 -43307859 - THE1B LTR MaLR 0 364 1 761 234 45 91 chr10 102281460 102281746 -43307542 + LTR16A LTR ERVL 178 450 0 193 256 23 15 chr10 102281759 102281892 -43307396 + CT-rich Low_complexity Low_complexity 1 134 0 1108 261 52 42 chr10 102282038 102282464 -43306824 + LTR16A1 LTR ERVL 1 430 -27 1397 197 70 7 chr10 102283083 102283367 -43305921 + AluJo SINE Alu 1 302 -10 1900 116 6 63 chr10 102283468 102283786 -43305502 + AluSx SINE Alu 1 300 -12 2013 230 46 50 chr10 102283926 102284487 -43304801 - MLT1G LTR MaLR -1 589 31 572 247 106 0 chr10 102284537 102284707 -43304581 - MIR SINE MIR -54 208 21 181 255 21 0 chr10 102285398 102285445 -43303843 - L2 LINE L2 -9 3263 3216 444 240 276 15 chr10 102287610 102287806 -43301482 - MIR SINE MIR 0 262 16 364 262 12 0 chr10 102288368 102288452 -43300836 + MIR3 SINE MIR 76 160 -48 581 301 5 25 chr10 102288453 102288649 -43300639 + MER117 DNA MER1_type 2 193 -4 1993 170 19 32 chr10 102288649 102289019 -43300269 + MLT1A1 LTR MaLR 1 365 0 25 0 0 0 chr10 102289514 102289539 -43299749 + AT_rich Low_complexity Low_complexity 1 25 0 2104 130 0 3 chr10 102289572 102289872 -43299416 + AluSx SINE Alu 3 301 -11 2374 110 0 0 chr10 102289918 102290228 -43299060 + AluSg SINE Alu 1 310 0 278 206 216 10 chr10 102290252 102290349 -43298939 + MER103 DNA DNA 1 117 -49 250 312 37 18 chr10 102290457 102290566 -43298722 - MIR3 SINE MIR -48 160 50 484 301 97 24 chr10 102290596 102290802 -43298486 - MIR SINE MIR 0 262 42 1991 163 24 3 chr10 102291747 102292128 -43297160 - Charlie5 DNA MER1_type 0 2622 2234 645 169 23 31 chr10 102292136 102292266 -43297022 - MER3 DNA MER1_type -87 122 41 21 49 0 49 chr10 102293932 102293993 -43295295 + AT_rich Low_complexity Low_complexity 1 58 0 1982 117 7 3 chr10 102294340 102294622 -43294666 - AluSx SINE Alu -10 302 20 515 311 44 6 chr10 102295617 102295797 -43293491 + MIR SINE MIR 11 197 -65 1813 174 3 0 chr10 102296304 102296603 -43292685 - AluJo SINE Alu -8 304 5 1686 161 15 4 chr10 102297343 102297644 -43291644 + AluJb SINE Alu 5 308 0 201 171 24 0 chr10 102298414 102298455 -43290833 + (TTAGGG)n Simple_repeat Simple_repeat 4 45 0 21 0 0 0 chr10 102298568 102298589 -43290699 + AT_rich Low_complexity Low_complexity 1 21 0 319 345 64 12 chr10 102298676 102298847 -43290441 + MIR SINE MIR 8 187 -75 224 204 0 23 chr10 102299119 102299163 -43290125 + (CA)n Simple_repeat Simple_repeat 2 44 0 263 246 100 55 chr10 102299190 102299300 -43289988 - L1ME4a LINE L1 -38 6083 5969 286 161 12 148 chr10 102300140 102300193 -43289095 + L2 LINE L2 3244 3285 -28 2267 95 0 0 chr10 102300193 102300503 -43288785 - AluSx SINE Alu 0 310 1 286 161 12 148 chr10 102300503 102300529 -43288759 + L2 LINE L2 3285 3313 0 2470 36 4 0 chr10 102300826 102301137 -43288151 - AluY SINE Alu 0 312 1 225 189 0 0 chr10 102301623 102301660 -43287628 - MIR SINE MIR -22 240 204 461 203 17 177 chr10 102301770 102302004 -43287284 - MIR SINE MIR -22 240 47 255 295 13 13 chr10 102302109 102302187 -43287101 - MIR SINE MIR -182 80 3 273 75 0 0 chr10 102302478 102302518 -43286770 + (TG)n Simple_repeat Simple_repeat 2 41 0 990 205 95 0 chr10 102302573 102302773 -43286515 - MER20 DNA MER1_type 0 219 1 501 234 69 17 chr10 102304403 102304578 -43284710 + L1MC5 LINE L1 7730 7913 -48 355 227 23 23 chr10 102305211 102305299 -43283989 + L2 LINE L2 3221 3308 -5 183 243 243 0 chr10 102305362 102305436 -43283852 + L2 LINE L2 3172 3263 -9 1345 185 59 18 chr10 102305466 102305785 -43283503 + L1ME3A LINE L1 5824 6165 -3 650 225 69 19 chr10 102306494 102306654 -43282634 - MER5B DNA MER1_type 0 178 11 233 270 43 61 chr10 102307362 102307477 -43281811 - MIR SINE MIR -70 192 80 2039 132 7 16 chr10 102307753 102308063 -43281225 - AluJb SINE Alu -5 307 1 379 189 113 0 chr10 102308082 102308188 -43281100 - L1ME4a LINE L1 -6 6115 5998 591 247 157 45 chr10 102308200 102308645 -43280643 - L1ME4a LINE L1 -158 5963 5469 2273 88 7 0 chr10 102308864 102309161 -43280127 - AluSp SINE Alu -14 299 1 2223 122 28 3 chr10 102309186 102309507 -43279781 - L1PB4 LINE L1 -11 6145 5817 231 254 0 0 chr10 102309575 102309630 -43279658 - L1ME4a LINE L1 -1131 5015 4961 283 284 0 23 chr10 102310621 102310709 -43278579 + MIR3 SINE MIR 122 207 -1 242 261 63 27 chr10 102311333 102311444 -43277844 - MIR3 SINE MIR -4 204 90 183 100 0 0 chr10 102311532 102311562 -43277726 + (TATATG)n Simple_repeat Simple_repeat 1 30 0 492 284 14 14 chr10 102311980 102312128 -43277160 - MIR3 SINE MIR -17 191 44 435 256 161 11 chr10 102312362 102312542 -43276746 - MIR SINE MIR -21 241 35 255 219 143 29 chr10 102312730 102312835 -43276453 + MER103 DNA DNA 12 128 -38 300 236 106 32 chr10 102313378 102313501 -43275787 + MER103 DNA DNA 35 166 0 556 316 90 4 chr10 102313621 102313855 -43275433 - MARNA DNA Mariner -44 542 289 445 290 82 0 chr10 102313871 102314027 -43275261 + MIR SINE MIR 16 184 -62 2546 20 0 10 chr10 102314049 102314343 -43274945 + AluY SINE Alu 1 291 -20 371 193 45 11 chr10 102314408 102314496 -43274792 - MARNA DNA Mariner -369 217 127 246 211 42 14 chr10 102314440 102314511 -43274777 + MARNA DNA Mariner 401 473 -113 * 2581 52 0 0 chr10 102314862 102315167 -43274121 - AluY SINE Alu -6 305 1 286 228 94 87 chr10 102315324 102315473 -43273815 + Charlie8 DNA MER1_type 115 264 -2153 295 301 0 78 chr10 102315642 102315745 -43273543 - MIR3 SINE MIR -104 104 10 603 301 96 9 chr10 102316057 102316295 -43272993 - MIR SINE MIR 0 262 1 752 151 0 0 chr10 102316483 102316589 -43272699 + FLAM_C SINE Alu 14 119 -24 330 45 0 0 chr10 102317542 102317586 -43271702 + (TG)n Simple_repeat Simple_repeat 2 45 0 284 266 147 38 chr10 102317818 102318002 -43271286 - L2 LINE L2 -736 2578 2375 285 169 0 17 chr10 102318018 102318077 -43271211 + L1PA15 LINE L1 6099 6156 -9 356 323 26 45 chr10 102320888 102321043 -43268245 - MIR3 SINE MIR -36 172 21 205 175 32 16 chr10 102322104 102322167 -43267121 + (CAAA)n Simple_repeat Simple_repeat 2 65 0 183 80 0 0 chr10 102323100 102323125 -43266163 + (TGGG)n Simple_repeat Simple_repeat 1 25 0 309 319 87 30 chr10 102324283 102324656 -43264632 - L2 LINE L2 -26 3246 2692 307 209 30 15 chr10 102325074 102325141 -43264147 - MIR3 SINE MIR -32 176 109 574 277 30 18 chr10 102326016 102326182 -43263106 + MIR SINE MIR 64 231 -31 203 171 0 0 chr10 102326196 102326231 -43263057 + (CAT)n Simple_repeat Simple_repeat 2 36 0 237 178 0 0 chr10 102327410 102327455 -43261833 + A-rich Low_complexity Low_complexity 1 45 0 349 303 62 14 chr10 102327571 102327716 -43261572 + MIR SINE MIR 56 207 -55 308 296 16 24 chr10 102327810 102327935 -43261353 - LTR67 LTR ERVL 0 557 434 828 262 15 52 chr10 102328465 102328736 -43260552 - MIR SINE MIR 0 262 2 618 189 106 8 chr10 102329130 102329262 -43260026 - MER5B DNA MER1_type -6 172 28 2394 149 26 37 chr10 102329286 102329741 -43259547 - MER74A LTR ERVL -105 453 4 4209 97 45 10 chr10 102329988 102330588 -43258700 + L1MA5A LINE L1 5677 6297 0 620 284 96 4 chr10 102331001 102331230 -43258058 - MIR SINE MIR 0 262 13 222 351 127 15 chr10 102331424 102331558 -43257730 + MIR3 SINE MIR 30 178 -30 283 241 0 0 chr10 102332185 102332243 -43257045 + MIR SINE MIR 81 138 -70 2587 71 0 0 chr10 102332414 102332724 -43256564 + AluY SINE Alu 1 310 -1 243 0 0 0 chr10 102333136 102333163 -43256125 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1424 98 0 80 chr10 102333166 102333390 -43255898 - AluSg/x SINE Alu -25 285 80 2225 104 10 0 chr10 102334182 102334480 -43254808 + AluSx SINE Alu 1 301 -11 343 227 13 0 chr10 102334633 102334708 -43254580 + MIR SINE MIR 54 129 -133 2698 69 26 51 chr10 102334708 102335099 -43254189 + L1PA10 LINE L1 5784 6164 -4 252 231 208 62 chr10 102335715 102335793 -43253495 - L2 LINE L2 -1 3312 3247 2043 104 4 14 chr10 102335793 102336072 -43253216 + AluSq SINE Alu 1 276 -37 302 91 18 0 chr10 102336076 102336131 -43253157 + (CAAAA)n Simple_repeat Simple_repeat 1 56 0 252 231 208 62 chr10 102336131 102336177 -43253111 - L2 LINE L2 -68 3245 3164 338 335 68 16 chr10 102336531 102336722 -43252566 - MIR SINE MIR -15 247 47 213 179 71 18 chr10 102336855 102336911 -43252377 + L2 LINE L2 3239 3297 -16 356 164 33 0 chr10 102337238 102337299 -43251989 - Tigger7 DNA MER2_type -32 2455 2393 973 136 26 0 chr10 102337539 102337694 -43251594 - FAM SINE Alu -6 43 1 1645 167 15 4 chr10 102337708 102337972 -43251316 - Tigger7 DNA MER2_type -2220 267 1 295 283 179 33 chr10 102338065 102338249 -43251039 + MIR SINE MIR 41 251 -11 1768 159 58 73 chr10 102338249 102338410 -43250878 + MLT1B LTR MaLR 1 163 -227 1835 151 10 10 chr10 102338410 102338722 -43250566 + AluJb SINE Alu 1 312 0 1768 159 58 73 chr10 102338722 102338956 -43250332 + MLT1B LTR MaLR 163 390 0 3444 103 45 4 chr10 102339002 102339489 -43249799 - MER84 LTR ERV1 0 507 1 6944 100 57 11 chr10 102339489 102340481 -43248807 - MER84-int LTR ERV1 0 4954 3918 921 133 0 0 chr10 102340486 102340629 -43248659 + Tigger2 DNA MER2_type 172 314 -2404 1114 154 0 6 chr10 102340630 102340799 -43248489 + AluJo SINE Alu 127 294 -18 3251 155 13 15 chr10 102340809 102341345 -43247943 + Tigger2 DNA MER2_type 330 864 -1854 16024 184 31 27 chr10 102341345 102342333 -43246955 - L1MA4 LINE L1 -11 6471 5488 216 0 0 0 chr10 102342333 102342357 -43246931 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 16024 184 31 27 chr10 102342357 102346172 -43243116 - L1MA4 LINE L1 -994 5488 1614 571 189 34 7 chr10 102346172 102346320 -43242968 - L1MB4 LINE L1 -2 6178 6027 16024 184 31 27 chr10 102346320 102347936 -43241352 - L1MA4 LINE L1 -4868 1614 5 2101 143 14 26 chr10 102347938 102348232 -43241056 + Tigger2 DNA MER2_type 850 1141 -1577 1813 156 7 33 chr10 102348232 102348539 -43240749 + AluSx SINE Alu 1 299 -13 2101 143 14 26 chr10 102348539 102348593 -43240695 + Tigger2 DNA MER2_type 1141 1194 -1524 * 5005 141 31 24 chr10 102348586 102349404 -43239884 + Tigger2 DNA MER2_type 1896 2718 0 1190 235 128 30 chr10 102350169 102350574 -43238714 - MLT1J2 LTR MaLR 0 450 6 470 216 29 10 chr10 102350577 102350679 -43238609 - MIR SINE MIR -101 161 58 302 276 29 29 chr10 102351314 102351419 -43237869 + MER5B DNA MER1_type 74 178 0 235 180 98 33 chr10 102351423 102351484 -43237804 + MLT1L LTR MaLR 143 207 -408 2658 143 26 9 chr10 102351596 102352017 -43237271 - MSTA LTR MaLR 0 428 1 237 185 0 0 chr10 102352765 102352830 -43236458 + GA-rich Low_complexity Low_complexity 2 66 0 2366 122 33 33 chr10 102353189 102353551 -43235737 - THE1B LTR MaLR -2 362 1 282 346 19 0 chr10 102353684 102353788 -43235500 - L2 LINE L2 -8 3305 3200 339 344 50 0 chr10 102354157 102354317 -43234971 - MIR SINE MIR -11 251 84 189 0 0 0 chr10 102355869 102355890 -43233398 + (GA)n Simple_repeat Simple_repeat 2 22 0 192 77 0 0 chr10 102356776 102356802 -43232486 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 4549 163 16 27 chr10 102356805 102357668 -43231620 - L1MA9 LINE L1 -38 6274 5421 375 240 60 67 chr10 102357709 102357859 -43231429 + MIR3 SINE MIR 21 169 -39 1552 124 52 0 chr10 102358282 102358515 -43230773 - AluJb SINE Alu -1 311 67 2149 112 0 31 chr10 102358515 102358837 -43230451 + AluSq SINE Alu 1 312 -1 472 221 0 0 chr10 102358844 102358921 -43230367 - AluJb SINE Alu -233 79 3 791 177 72 33 chr10 102359442 102359623 -43229665 - MER5A DNA MER1_type -1 188 1 478 251 107 78 chr10 102360061 102360304 -43228984 - MIR SINE MIR 0 262 13 261 333 58 32 chr10 102360314 102360470 -43228818 - MER5A DNA MER1_type -23 166 7 401 312 74 68 chr10 102361326 102361650 -43227638 + L2 LINE L2 2944 3269 -3 1410 191 43 3 chr10 102361895 102362198 -43227090 + LTR37A LTR ERV1 85 399 -27 1578 182 54 0 chr10 102362213 102362493 -43226795 + AluJo SINE Alu 1 295 -17 501 218 38 8 chr10 102362503 102362636 -43226652 + L1MB4 LINE L1 5138 5274 -872 477 198 0 0 chr10 102362636 102362717 -43226571 + MLT1A1 LTR MaLR 1 81 -284 355 139 93 23 chr10 102362721 102362807 -43226481 + LTR36 LTR ERV1 3 94 -517 647 131 0 0 chr10 102362807 102362891 -43226397 - AluSg/x SINE Alu -41 271 188 1757 129 87 0 chr10 102362894 102363180 -43226108 + MLT1A1-int LTR MaLR 1425 1735 0 1718 221 22 25 chr10 102363180 102363546 -43225742 + MLT1A1 LTR MaLR 1 365 0 4267 152 48 45 chr10 102363546 102363989 -43225299 + L1MB4 LINE L1 5270 5710 -470 2457 127 97 8 chr10 102363989 102364382 -43224906 + MSTA LTR MaLR 1 428 0 4267 152 48 45 chr10 102364382 102364431 -43224857 + L1MB4 LINE L1 5710 5757 -423 1813 153 3 27 chr10 102364431 102364731 -43224557 + AluJo SINE Alu 1 293 -19 4267 152 48 45 chr10 102364731 102365144 -43224144 + L1MB4 LINE L1 5757 6179 -1 200 250 159 0 chr10 102365296 102365384 -43223904 - L2 LINE L2 -829 2485 2384 3491 191 33 45 chr10 102365386 102365995 -43223293 - LTR39 LTR ERV1 0 783 183 2320 85 3 0 chr10 102365995 102366288 -43223000 - AluSc SINE Alu -15 294 1 3491 191 33 45 chr10 102366288 102366436 -43222852 - LTR39 LTR ERV1 -600 183 35 207 231 96 0 chr10 102366443 102366495 -43222793 + MIR SINE MIR 46 102 -160 580 255 62 26 chr10 102366570 102366762 -43222526 - L2 LINE L2 -928 2386 2188 2198 120 0 7 chr10 102367033 102367359 -43221929 - AluSg SINE Alu 0 310 1 2384 196 55 64 chr10 102367415 102367930 -43221358 - MER92B LTR ERV1 0 636 127 2806 151 51 15 chr10 102367930 102368399 -43220889 - MER66B LTR ERV1 0 486 1 2384 196 55 64 chr10 102368399 102368525 -43220763 - MER92B LTR ERV1 -509 127 1 353 270 44 51 chr10 102368827 102368964 -43220324 + Charlie8 DNA MER1_type 7 142 -2275 191 289 68 121 chr10 102369688 102369878 -43219410 + L2 LINE L2 3040 3219 -53 2825 226 68 62 chr10 102370729 102370942 -43218346 - L1ME3A LINE L1 -5 6165 5955 631 194 8 0 chr10 102370942 102371076 -43218212 - L1MA8 LINE L1 -2 6289 6155 2825 226 68 62 chr10 102371076 102371730 -43217558 - L1ME3A LINE L1 -215 5955 5236 2042 125 0 14 chr10 102371730 102372027 -43217261 - AluSx SINE Alu -14 298 6 2825 226 68 62 chr10 102372027 102372376 -43216912 - L1ME3A LINE L1 -934 5236 4891 505 237 110 46 chr10 102372485 102372658 -43216630 - MIR SINE MIR -13 249 66 765 222 63 63 chr10 102373182 102373403 -43215885 - MIR SINE MIR -10 252 32 348 24 0 0 chr10 102373644 102373685 -43215603 + (TCTCC)n Simple_repeat Simple_repeat 2 42 0 196 294 0 0 chr10 102373693 102373744 -43215544 + L2 LINE L2 3005 3055 -217 1497 159 21 25 chr10 102373879 102374162 -43215126 + AluJo SINE Alu 1 282 -30 240 163 0 0 chr10 102374178 102374221 -43215067 + (TA)n Simple_repeat Simple_repeat 2 44 0 2363 125 97 5 chr10 102374224 102374615 -43214673 - MSTA LTR MaLR -1 427 1 286 301 21 21 chr10 102374669 102374762 -43214526 + MIR SINE MIR 70 162 -100 680 314 104 48 chr10 102374762 102375138 -43214150 - L2 LINE L2 -1 3271 2875 533 291 28 7 chr10 102375181 102375322 -43213966 - MLT1G1 LTR MaLR -1 594 451 326 286 166 14 chr10 102375344 102375497 -43213791 - MLT1G LTR MaLR -370 225 35 2140 116 26 0 chr10 102375546 102375848 -43213440 + AluSx SINE Alu 1 310 -2 2094 107 10 7 chr10 102375863 102376153 -43213135 + AluSx SINE Alu 5 295 -17 317 291 76 41 chr10 102376337 102376509 -43212779 + L2 LINE L2 3123 3300 -13 227 79 26 0 chr10 102376763 102376801 -43212487 + (GA)n Simple_repeat Simple_repeat 1 39 0 309 244 166 53 chr10 102376801 102376960 -43212328 + MIR SINE MIR 19 191 -62 33 25 0 0 chr10 102377058 102377098 -43212190 + AT_rich Low_complexity Low_complexity 1 40 0 270 329 0 0 chr10 102377451 102377527 -43211761 - L2 LINE L2 -8 3305 3230 246 62 0 0 chr10 102378313 102378345 -43210943 + (CGG)n Simple_repeat Simple_repeat 2 33 0 629 294 52 9 chr10 102378832 102379063 -43210225 - MIR SINE MIR -10 252 12 268 301 123 0 chr10 102379376 102379449 -43209839 - MIR3 SINE MIR -38 170 89 1283 178 16 32 chr10 102379754 102380007 -43209281 + AluJb SINE Alu 29 277 -35 206 310 228 0 chr10 102380264 102380422 -43208866 + MIR SINE MIR 69 262 0 824 109 40 244 chr10 102381772 102382047 -43207241 + MER30 DNA MER1_type 4 222 -8 335 290 29 87 chr10 102382112 102382250 -43207038 - MIR SINE MIR -113 149 20 466 200 133 8 chr10 102383619 102383739 -43205549 - L1MDa LINE L1 -6026 514 380 270 56 0 0 chr10 102383761 102383797 -43205491 + (TTTTA)n Simple_repeat Simple_repeat 4 39 0 4166 85 0 2 chr10 102383799 102384445 -43204843 - L1PA10 LINE L1 -17 6151 5455 2085 161 36 23 chr10 102384444 102384828 -43204460 - L1MDa LINE L1 -6133 407 19 * 1118 171 17 0 chr10 102384832 102385013 -43204275 + MER58A DNA MER1_type 39 222 -2 309 301 19 39 chr10 102385014 102385117 -43204171 - MIR SINE MIR -89 119 19 33 0 0 0 chr10 102385441 102385474 -43203814 + AT_rich Low_complexity Low_complexity 1 33 0 2298 103 0 0 chr10 102386118 102386428 -43202860 - AluSg SINE Alu 0 310 1 2703 73 3 14 chr10 102386777 102387147 -43202141 - L1PB2 LINE L1 -2 6149 5784 660 127 0 47 chr10 102387158 102387375 -43201913 + (TA)n Simple_repeat Simple_repeat 1 206 0 681 90 64 0 chr10 102387375 102387484 -43201804 - L1M4 LINE L1 -369 5782 5678 23 0 0 0 chr10 102388031 102388054 -43201234 + AT_rich Low_complexity Low_complexity 1 23 0 1763 170 7 4 chr10 102389385 102389661 -43199627 + AluJo SINE Alu 1 277 -35 23 33 0 0 chr10 102390389 102390419 -43198869 + AT_rich Low_complexity Low_complexity 1 30 0 453 159 9 75 chr10 102390874 102390981 -43198307 - MLT1J LTR MaLR 0 511 412 183 361 0 0 chr10 102391045 102391106 -43198182 - L2 LINE L2 -1141 2173 2113 203 233 133 60 chr10 102391159 102391309 -43197979 + L2 LINE L2 3153 3313 0 1216 155 17 0 chr10 102391603 102391784 -43197504 + AluJo SINE Alu 2 185 -127 408 269 91 38 chr10 102391822 102392008 -43197280 - MIR SINE MIR -35 227 32 615 165 0 35 chr10 102392050 102392165 -43197123 - AluJb SINE Alu -12 300 190 4212 136 25 0 chr10 102392186 102392868 -43196420 - L1MC1 LINE L1 -13 6320 5622 728 284 29 58 chr10 102392868 102393103 -43196185 - MIR SINE MIR -30 232 3 201 108 0 0 chr10 102395144 102395181 -43194107 + (TTTTTG)n Simple_repeat Simple_repeat 2 38 0 2188 107 7 0 chr10 102397214 102397505 -43191783 + AluSq SINE Alu 4 296 -17 577 271 127 6 chr10 102397584 102397765 -43191523 + MIR SINE MIR 26 228 -34 28 48 0 0 chr10 102397974 102398016 -43191272 + AT_rich Low_complexity Low_complexity 1 42 0 1757 183 0 13 chr10 102398043 102398343 -43190945 - AluJo SINE Alu -16 296 1 273 286 89 65 chr10 102399625 102399793 -43189495 + MIR SINE MIR 53 224 -38 331 273 68 0 chr10 102399958 102400105 -43189183 + MIR SINE MIR 76 235 -27 443 324 170 46 chr10 102400833 102401611 -43187677 + L2 LINE L2 2362 3252 -20 265 272 52 89 chr10 102401950 102401996 -43187292 + L2 LINE L2 2035 2081 -1233 1470 174 6 73 chr10 102401996 102402313 -43186975 - AluJo SINE Alu -16 296 1 265 272 52 89 chr10 102402313 102402457 -43186831 + L2 LINE L2 2081 2218 -1096 329 327 65 72 chr10 102402657 102402935 -43186353 + L2 LINE L2 2997 3272 0 273 256 171 0 chr10 102403014 102403096 -43186192 + MER5A DNA MER1_type 4 99 -90 564 342 60 0 chr10 102403155 102403389 -43185899 - L3 LINE CR1 -99 1478 1231 2089 132 0 0 chr10 102405139 102405435 -43183853 - AluSg SINE Alu -12 298 3 21 57 0 0 chr10 102405467 102405502 -43183786 + AT_rich Low_complexity Low_complexity 1 35 0 260 270 169 11 chr10 102406587 102406676 -43182612 - MIR SINE MIR -50 212 110 26 0 0 0 chr10 102406702 102406728 -43182560 + AT_rich Low_complexity Low_complexity 1 26 0 232 134 224 30 chr10 102406748 102406815 -43182473 - L1MA9 LINE L1 -178 6134 6055 343 253 66 11 chr10 102406815 102406906 -43182382 - MIR SINE MIR -92 116 21 417 259 101 14 chr10 102407015 102407154 -43182134 + MIR SINE MIR 112 262 0 1129 271 110 68 chr10 102407316 102407862 -43181426 + L3 LINE CR1 1004 1572 -5 268 224 0 0 chr10 102408044 102408093 -43181195 - L3 LINE CR1 -9 1568 1520 557 215 183 58 chr10 102409183 102409495 -43179793 - L1MC4a LINE L1 -1949 5859 5509 22 0 0 0 chr10 102409552 102409574 -43179714 + AT_rich Low_complexity Low_complexity 1 22 0 215 353 69 10 chr10 102410305 102410407 -43178881 - L3 LINE CR1 -90 1487 1380 698 189 0 8 chr10 102411442 102411574 -43177714 - FLAM_C SINE Alu -2 131 1 2369 104 8 14 chr10 102411979 102412334 -43176954 + THE1A LTR MaLR 1 353 -2 306 233 0 0 chr10 102412773 102412833 -43176455 - L2 LINE L2 0 3313 3254 21 0 0 0 chr10 102413239 102413260 -43176028 + AT_rich Low_complexity Low_complexity 1 21 0 301 313 103 37 chr10 102413523 102413737 -43175551 - MARNA DNA Mariner -290 296 69 549 180 55 55 chr10 102413797 102413925 -43175363 - L2 LINE L2 -4 3309 3182 2469 111 10 28 chr10 102414760 102415157 -43174131 + MLT1B LTR MaLR 1 390 0 24 0 0 0 chr10 102415200 102415224 -43174064 + AT_rich Low_complexity Low_complexity 1 24 0 2126 127 0 19 chr10 102415698 102416006 -43173282 + AluSx SINE Alu 6 307 -5 193 331 66 40 chr10 102416395 102416546 -43172742 + L2 LINE L2 2805 2959 -313 320 276 63 31 chr10 102417236 102417363 -43171925 - MIR3 SINE MIR -48 160 30 2291 103 3 0 chr10 102418377 102418679 -43170609 - AluSc SINE Alu -6 303 1 1452 201 84 48 chr10 102420275 102420717 -43168571 + MER39 LTR ERV1 250 707 0 2686 87 5 14 chr10 102421054 102421421 -43167867 + THE1B LTR MaLR 1 364 0 22 0 0 0 chr10 102421453 102421475 -43167813 + AT_rich Low_complexity Low_complexity 1 22 0 204 40 0 0 chr10 102422170 102422195 -43167093 + (GA)n Simple_repeat Simple_repeat 2 26 0 818 169 0 0 chr10 102422251 102422375 -43166913 + FLAM_C SINE Alu 1 124 -19 216 97 0 0 chr10 102422624 102422655 -43166633 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 1983 148 10 6 chr10 102422660 102422971 -43166317 - AluJo SINE Alu 0 312 1 651 297 86 29 chr10 102422971 102423374 -43165914 + L1MC4a LINE L1 5518 5945 -225 2034 105 0 72 chr10 102423376 102423708 -43165580 + AluSc SINE Alu 1 308 -1 1826 143 4 0 chr10 102423991 102424264 -43165024 + AluSx SINE Alu 1 274 -38 40 21 0 0 chr10 102424267 102424314 -43164974 + AT_rich Low_complexity Low_complexity 1 47 0 321 68 0 0 chr10 102424859 102424903 -43164385 + (TG)n Simple_repeat Simple_repeat 1 44 0 267 140 0 0 chr10 102425199 102425249 -43164039 + (T)n Simple_repeat Simple_repeat 1 50 0 1415 180 25 32 chr10 102425750 102426109 -43163179 + AluJb SINE Alu 1 357 0 592 208 275 19 chr10 102426330 102426537 -43162751 - MIR SINE MIR 0 262 3 227 313 111 10 chr10 102426558 102426657 -43162631 + MIR SINE MIR 47 155 -107 211 218 91 0 chr10 102426664 102426719 -43162569 + L2 LINE L2 3254 3313 0 2348 104 0 3 chr10 102427189 102427497 -43161791 - AluSx SINE Alu -3 309 3 303 146 0 0 chr10 102428807 102428862 -43160426 + (CA)n Simple_repeat Simple_repeat 2 56 0 2041 124 69 36 chr10 102429218 102429581 -43159707 + THE1C LTR MaLR 1 375 0 310 194 19 93 chr10 102429763 102429871 -43159417 + L1MB8 LINE L1 4567 4666 -1480 1019 216 109 55 chr10 102429875 102430277 -43159011 + HAL1b LINE L1 697 1120 -228 450 220 27 131 chr10 102430274 102430312 -43158976 + L1MB8 LINE L1 5788 5828 -350 * 1681 192 0 3 chr10 102430312 102430603 -43158685 + AluJo SINE Alu 1 290 -22 450 220 27 131 chr10 102430603 102430955 -43158333 + L1MB8 LINE L1 5828 6124 -54 2237 121 0 0 chr10 102430955 102431252 -43158036 + AluSx SINE Alu 1 297 -15 450 220 27 131 chr10 102431252 102431301 -43157987 + L1MB8 LINE L1 6124 6177 -1 341 285 33 26 chr10 102431367 102431518 -43157770 + HAL1b LINE L1 1190 1341 -7 27 0 0 0 chr10 102432331 102432358 -43156930 + AT_rich Low_complexity Low_complexity 1 27 0 333 225 39 129 chr10 102433078 102433256 -43156032 - MER5A DNA MER1_type -25 164 3 2684 129 49 7 chr10 102433993 102434404 -43154884 + MSTA LTR MaLR 1 428 0 1306 137 24 0 chr10 102435730 102435941 -43153347 - L1MA4 LINE L1 -309 5991 5776 486 51 0 88 chr10 102435943 102436080 -43153208 + (TA)n Simple_repeat Simple_repeat 2 126 0 1884 182 9 0 chr10 102436102 102436437 -43152851 + L1MA4 LINE L1 5952 6289 -11 1999 226 95 30 chr10 102436587 102437158 -43152130 + L1MC4 LINE L1 7295 7902 -140 1789 154 11 7 chr10 102437180 102437459 -43151829 + AluJb SINE Alu 10 289 -23 296 227 171 97 chr10 102437649 102437825 -43151463 + MIR SINE MIR 57 245 -17 406 290 35 75 chr10 102438095 102438295 -43150993 - MIR SINE MIR -37 225 34 2087 136 0 0 chr10 102438477 102438778 -43150510 - AluSg SINE Alu -8 302 2 531 285 30 18 chr10 102438778 102438943 -43150345 - MIR SINE MIR 0 262 96 1568 149 25 67 chr10 102439197 102439512 -43149776 - AluSx SINE Alu -10 302 1 272 269 231 0 chr10 102440905 102441013 -43148275 - MIR SINE MIR -13 249 117 444 240 74 0 chr10 102441228 102441349 -43147939 + L2 LINE L2 3143 3272 0 367 326 34 14 chr10 102443084 102443338 -43145950 + L1ME LINE L1 717 979 -5091 734 177 0 0 chr10 102443969 102444099 -43145189 + FRAM SINE Alu 40 169 -7 351 0 0 0 chr10 102444454 102444493 -43144795 + (CA)n Simple_repeat Simple_repeat 2 40 0 201 217 0 33 chr10 102445644 102445704 -43143584 + GA-rich Low_complexity Low_complexity 2 59 0 501 198 8 33 chr10 102446140 102446261 -43143027 - L1MD2 LINE L1 -15 6344 6227 853 223 20 56 chr10 102446266 102446517 -43142771 - L1MD2 LINE L1 -108 6251 6010 2206 90 38 0 chr10 102446549 102446837 -43142451 + AluSq SINE Alu 1 299 -14 312 279 59 0 chr10 102447011 102447147 -43142141 + LTR33A LTR ERVL 372 515 -8 307 344 66 16 chr10 102447177 102447299 -43141989 - L2 LINE L2 -9 3263 3136 206 88 0 29 chr10 102447312 102447346 -43141942 + MER5C DNA MER1_type 2 34 -290 2344 119 0 0 chr10 102447367 102447678 -43141610 - AluSx SINE Alu -1 311 1 252 210 32 16 chr10 102447678 102447740 -43141548 - MER5B DNA MER1_type -112 66 4 2481 182 25 35 chr10 102448494 102449004 -43140284 + MLT1D LTR MaLR 1 505 0 936 296 44 11 chr10 102449262 102449624 -43139664 - LTR16B LTR ERVL -90 374 1 182 208 38 38 chr10 102450848 102450901 -43138387 - L2 LINE L2 0 3272 3220 2109 111 5 134 chr10 102450914 102451301 -43137987 + MER1B DNA MER1_type 1 337 0 2215 131 0 0 chr10 102452246 102452559 -43136729 - AluSq SINE Alu 0 313 1 271 246 88 70 chr10 102452559 102452662 -43136626 - MIR3 SINE MIR -9 199 92 347 240 0 0 chr10 102452739 102452814 -43136474 + MER63 DNA MER1_type 677 751 -85 2444 80 13 0 chr10 102453579 102453881 -43135407 - AluSx SINE Alu -6 306 1 218 264 69 0 chr10 102454701 102454773 -43134515 - MIR3 SINE MIR -19 189 113 211 278 19 56 chr10 102454808 102454862 -43134426 - L2 LINE L2 -87 3185 3134 259 318 56 37 chr10 102454869 102454976 -43134312 - MER5B DNA MER1_type -69 109 1 257 274 89 55 chr10 102454976 102455111 -43134177 - MIR3 SINE MIR -53 155 16 438 271 141 18 chr10 102455418 102455588 -43133700 + MIR SINE MIR 55 245 -17 897 262 178 39 chr10 102455654 102456193 -43133095 + MLT1L LTR MaLR 2 615 0 1896 130 40 3 chr10 102456324 102456624 -43132664 + AluSx SINE Alu 1 311 -1 257 255 68 0 chr10 102456858 102456951 -43132337 - MIR SINE MIR -61 201 95 4842 169 59 35 chr10 102456955 102458568 -43130720 + L1MC2 LINE L1 4696 6344 0 182 383 11 21 chr10 102458576 102458670 -43130618 - MIR SINE MIR -162 100 8 237 160 133 80 chr10 102459346 102459421 -43129867 - MIR3 SINE MIR -20 188 110 286 241 37 46 chr10 102459511 102459619 -43129669 - MIR SINE MIR -24 238 132 2328 105 3 0 chr10 102461136 102461442 -43127846 + AluSq SINE Alu 1 307 -6 601 277 60 44 chr10 102462360 102462609 -43126679 + MIR SINE MIR 2 254 -8 2118 149 0 0 chr10 102463068 102463370 -43125918 - AluSq SINE Alu -11 302 1 2088 96 4 0 chr10 102463938 102464209 -43125079 + AluSg SINE Alu 29 300 -10 191 188 0 0 chr10 102464324 102464356 -43124932 - L2 LINE L2 -19 3294 3263 198 284 0 30 chr10 102464648 102464715 -43124573 + MIR SINE MIR 45 109 -99 225 276 53 26 chr10 102464985 102465061 -43124227 + MIR3 SINE MIR 117 194 -14 380 121 0 30 chr10 102465112 102465178 -43124110 + MER5B DNA MER1_type 1 64 -114 2220 117 7 0 chr10 102465180 102465487 -43123801 + AluSx SINE Alu 1 309 -3 1866 155 3 0 chr10 102465561 102465852 -43123436 - AluJb SINE Alu -20 292 1 279 320 47 0 chr10 102466756 102466906 -43122382 + L1ME4a LINE L1 5963 6119 -2 461 125 0 62 chr10 102467398 102467494 -43121794 + MER53 DNA DNA 93 182 -7 * 524 133 0 51 chr10 102467410 102467508 -43121780 - MER53 DNA DNA -94 95 3 2035 98 4 0 chr10 102469495 102469760 -43119528 - AluSx SINE Alu -3 309 44 2524 67 0 0 chr10 102470347 102470645 -43118643 - AluY SINE Alu -13 298 1 1981 110 65 7 chr10 102470754 102471044 -43118244 - AluSx SINE Alu -5 307 1 207 298 0 0 chr10 102471051 102471108 -43118180 - L2 LINE L2 -1 3312 3256 1112 253 100 12 chr10 102471152 102471492 -43117796 + MLT1I LTR MaLR 40 409 0 756 271 167 45 chr10 102471943 102472180 -43117108 + L1ME4a LINE L1 5575 5782 -339 606 100 0 0 chr10 102472180 102472260 -43117028 + MADE1 DNA Mariner 1 80 0 756 271 167 45 chr10 102472260 102472395 -43116893 + L1ME4a LINE L1 5782 5899 -222 1708 157 14 14 chr10 102472395 102472688 -43116600 + AluJb SINE Alu 1 293 -19 756 271 167 45 chr10 102472688 102472798 -43116490 + L1ME4a LINE L1 5899 6117 -4 470 150 12 0 chr10 102474882 102474962 -43114326 + MER53 DNA DNA 1 81 -108 225 94 0 0 chr10 102475083 102475115 -43114173 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 269 235 0 0 chr10 102475115 102475166 -43114122 + polypurine Low_complexity Low_complexity 4 54 0 605 322 48 24 chr10 102475790 102476130 -43113158 + L2 LINE L2 2676 3029 -243 967 234 19 19 chr10 102476318 102476527 -43112761 + MER58A DNA MER1_type 1 209 -15 419 233 26 52 chr10 102476543 102476659 -43112629 + L2 LINE L2 3144 3256 -16 581 233 108 42 chr10 102477183 102477471 -43111817 - L1ME4a LINE L1 -237 5884 5578 1838 175 125 8 chr10 102477858 102478241 -43111047 - MSTA LTR MaLR 0 428 1 2207 176 79 137 chr10 102478754 102479526 -43109762 - LTR8A LTR ERV1 0 727 1 319 264 88 32 chr10 102479807 102479932 -43109356 + HAL1 LINE L1 928 1059 -1448 2288 114 3 0 chr10 102480129 102480435 -43108853 + AluSx SINE Alu 1 307 -5 349 264 7 90 chr10 102480724 102480868 -43108420 + HAL1b LINE L1 35 166 -1182 3683 211 55 18 chr10 102480868 102481502 -43107786 + L1ME1 LINE L1 4456 5065 -1101 2090 142 3 3 chr10 102481502 102481805 -43107483 + AluJb SINE Alu 1 303 -9 3683 211 55 18 chr10 102481805 102482768 -43106520 + L1ME1 LINE L1 5065 6111 -55 2162 118 3 0 chr10 102482768 102483055 -43106233 + AluSx SINE Alu 1 288 -24 25 51 0 0 chr10 102483055 102483094 -43106194 + AT_rich Low_complexity Low_complexity 1 39 0 2158 127 7 0 chr10 102483139 102483446 -43105842 + AluSx SINE Alu 1 309 -3 462 36 0 0 chr10 102483574 102483630 -43105658 + (TA)n Simple_repeat Simple_repeat 1 56 0 403 330 82 15 chr10 102483806 102484012 -43105276 - L2 LINE L2 -508 2806 2587 2188 85 34 7 chr10 102484191 102484485 -43104803 + AluSg SINE Alu 1 302 -8 608 223 68 97 chr10 102484830 102485139 -43104149 - LTR16B LTR ERVL -161 303 4 222 37 0 0 chr10 102485486 102485513 -43103775 + (TC)n Simple_repeat Simple_repeat 1 27 0 252 86 0 0 chr10 102485513 102485548 -43103740 + (TG)n Simple_repeat Simple_repeat 1 35 0 23 0 0 0 chr10 102485730 102485753 -43103535 + AT_rich Low_complexity Low_complexity 1 23 0 192 77 0 0 chr10 102486431 102486457 -43102831 + (TG)n Simple_repeat Simple_repeat 2 27 0 1871 137 7 38 chr10 102486457 102486749 -43102539 - AluSx SINE Alu -29 283 1 992 301 113 0 chr10 102486775 102487154 -43102134 + LTR16A LTR ERVL 29 450 0 508 148 34 0 chr10 102487183 102487271 -43102017 - MER53 DNA DNA -4 185 95 551 270 39 17 chr10 102487421 102487599 -43101689 + MER5A DNA MER1_type 2 183 -6 2416 106 46 3 chr10 102488021 102488370 -43100918 - THE1B LTR MaLR 0 364 1 754 264 38 29 chr10 102489013 102489328 -43099960 + L2 LINE L2 2996 3313 0 1640 181 48 0 chr10 102489646 102489679 -43099609 - AluJo SINE Alu -6 306 276 662 34 11 0 chr10 102489679 102489768 -43099520 + (TC)n Simple_repeat Simple_repeat 1 90 0 1640 181 48 0 chr10 102489768 102490026 -43099262 - AluJo SINE Alu -36 276 1 476 253 103 79 chr10 102490755 102490950 -43098338 - L2 LINE L2 0 3313 3124 2711 128 39 5 chr10 102490950 102491364 -43097924 - MSTA LTR MaLR 0 428 1 9210 165 44 7 chr10 102491364 102492956 -43096332 - MSTA-int LTR MaLR 0 1651 1 2217 156 43 28 chr10 102492956 102493091 -43096197 - MSTA LTR MaLR 0 428 296 2192 87 3 7 chr10 102493091 102493377 -43095911 - AluY SINE Alu -5 306 22 2217 156 43 28 chr10 102493377 102493663 -43095625 - MSTA LTR MaLR -132 296 1 476 253 103 79 chr10 102493663 102493757 -43095531 - L2 LINE L2 -188 3125 3015 25 31 0 0 chr10 102494854 102494886 -43094402 + AT_rich Low_complexity Low_complexity 1 32 0 420 20 0 0 chr10 102494948 102494997 -43094291 + (TCCA)n Simple_repeat Simple_repeat 3 51 0 844 286 29 0 chr10 102495000 102495241 -43094047 + MIR SINE MIR 12 259 -3 180 0 0 0 chr10 102495364 102495384 -43093904 + (CAGA)n Simple_repeat Simple_repeat 3 22 0 1004 286 103 21 chr10 102495728 102496258 -43093030 + L2 LINE L2 2737 3307 -6 354 192 14 0 chr10 102496902 102496975 -43092313 + MIR SINE MIR 39 112 -150 465 257 59 72 chr10 102496975 102497197 -43092091 + MER92C LTR ERV1 1 219 -335 1953 148 0 3 chr10 102497228 102497542 -43091746 + AluJb SINE Alu 1 313 0 378 185 0 0 chr10 102497544 102497609 -43091679 + MER92C LTR ERV1 490 554 0 264 271 161 8 chr10 102497618 102497736 -43091552 + MIR SINE MIR 117 252 -10 2532 157 123 30 chr10 102498149 102498653 -43090635 - MLT2B3 LTR ERVL -3 551 1 401 265 12 90 chr10 102498686 102498808 -43090480 + MER5B DNA MER1_type 26 133 -45 2383 59 7 23 chr10 102498808 102499115 -43090173 + AluY SINE Alu 1 302 -9 401 265 12 90 chr10 102499115 102499158 -43090130 + MER5B DNA MER1_type 133 178 0 22 0 0 0 chr10 102499543 102499565 -43089723 + AT_rich Low_complexity Low_complexity 1 22 0 441 0 0 0 chr10 102500128 102500177 -43089111 + (TG)n Simple_repeat Simple_repeat 2 50 0 573 186 43 106 chr10 102500182 102500370 -43088918 - AluJo SINE Alu -15 297 122 2366 152 60 79 chr10 102500370 102500904 -43088384 + MER74A LTR ERVL 35 558 0 1271 166 134 52 chr10 102501387 102501694 -43087594 - MER34C LTR ERV1 0 585 254 887 131 0 15 chr10 102501701 102501838 -43087450 + FLAM_C SINE Alu 9 143 0 1387 154 96 0 chr10 102501868 102502108 -43087180 - MER34C LTR ERV1 -322 263 1 743 222 118 106 chr10 102502193 102502554 -43086734 + MER34C LTR ERV1 1 365 -177 3343 156 70 7 chr10 102502554 102503139 -43086149 - LTR26E LTR ERV1 0 622 1 743 222 118 106 chr10 102503139 102503316 -43085972 + MER34C LTR ERV1 365 539 -3 4257 110 163 80 chr10 102503443 102504863 -43084425 + pTR5 LTR ERV1 743 2438 0 1151 177 4 30 chr10 102504945 102505182 -43084106 + AluJo SINE Alu 63 293 -19 1045 161 76 167 chr10 102505237 102505426 -43083862 - MER34B LTR ERV1 0 565 360 1981 104 49 16 chr10 102505426 102505733 -43083555 + L1PA10 LINE L1 5852 6168 0 1045 161 76 167 chr10 102505733 102505830 -43083458 - MER34B LTR ERV1 -205 360 256 1839 161 0 39 chr10 102505830 102506135 -43083153 + AluJo SINE Alu 1 293 -19 1045 161 76 167 chr10 102506135 102506343 -43082945 - MER34B LTR ERV1 -309 256 31 2226 155 55 33 chr10 102506343 102506419 -43082869 + LOR1b LTR ERV1 1 74 -387 2369 101 0 0 chr10 102506419 102506717 -43082571 - AluSx SINE Alu -14 298 1 2226 155 55 33 chr10 102506717 102506782 -43082506 + LOR1b LTR ERV1 74 136 -325 1422 198 0 80 chr10 102506782 102507121 -43082167 + AluJb SINE Alu 1 312 0 2226 155 55 33 chr10 102507121 102507429 -43081859 + LOR1b LTR ERV1 136 461 0 1045 161 76 167 chr10 102507429 102507549 -43081739 - MER34B LTR ERV1 -534 31 5 1923 215 102 76 chr10 102509008 102509775 -43079513 + LTR1B LTR ERV1 1 787 -39 850 96 0 0 chr10 102509879 102509989 -43079299 + MER57A LTR ERV1 8 117 -286 3116 130 79 49 chr10 102509989 102510052 -43079236 + MER39B LTR ERV1 1 61 -592 1822 184 0 3 chr10 102510052 102510356 -43078932 - AluJb SINE Alu -9 303 1 3116 130 79 49 chr10 102510356 102510536 -43078752 + MER39B LTR ERV1 61 234 -419 2172 127 3 0 chr10 102510536 102510844 -43078444 + AluSx SINE Alu 1 309 -3 3116 130 79 49 chr10 102510844 102510981 -43078307 + MER39B LTR ERV1 234 365 -288 2796 173 77 48 chr10 102510981 102511686 -43077602 + LTR8A LTR ERV1 1 725 -2 3116 130 79 49 chr10 102511686 102511897 -43077391 + MER39B LTR ERV1 365 612 -41 1590 146 0 57 chr10 102511898 102511967 -43077321 + MER57A LTR ERV1 129 200 -203 2992 189 61 35 chr10 102511967 102512676 -43076612 + LTR8A LTR ERV1 1 727 0 1590 146 0 57 chr10 102512676 102512855 -43076433 + MER57A LTR ERV1 200 362 -41 2158 136 0 3 chr10 102512855 102513165 -43076123 - AluJb SINE Alu -3 309 1 1590 146 0 57 chr10 102513165 102513196 -43076092 + MER57A LTR ERV1 362 393 -10 2672 171 43 12 chr10 102513466 102513982 -43075306 + MER89 LTR ERV1 1 532 -27 486 153 12 12 chr10 102513980 102514065 -43075223 + LTR8A LTR ERV1 218 302 -425 * 702 185 49 142 chr10 102514205 102514530 -43074758 - MER51C LTR ERV1 0 640 346 2051 109 0 7 chr10 102514698 102514981 -43074307 + AluSx SINE Alu 23 303 -9 3775 177 28 60 chr10 102515105 102515569 -43073719 + MER44D DNA MER2_type 1 305 -2182 3612 144 65 23 chr10 102515569 102516213 -43073075 + LTR51 LTR ERV1 1 671 0 3775 177 28 60 chr10 102516213 102516504 -43072784 + MER44D DNA MER2_type 305 604 -1 422 148 182 0 chr10 102516691 102516779 -43072509 + MLT1J LTR MaLR 90 193 -318 686 265 85 27 chr10 102518172 102518395 -43070893 + MIR SINE MIR 27 262 0 254 250 0 17 chr10 102518465 102518525 -43070763 - MLT1L LTR MaLR 0 615 557 358 250 83 9 chr10 102518738 102518846 -43070442 - MLT1L LTR MaLR -332 283 168 253 295 26 0 chr10 102518950 102519028 -43070260 - MIR SINE MIR -148 114 35 2429 118 76 13 chr10 102519038 102519435 -43069853 + MSTB LTR MaLR 5 426 0 7422 165 31 124 chr10 102519435 102519819 -43069469 + MSTB-int LTR MaLR 1 419 -1232 2273 67 32 3 chr10 102519819 102520101 -43069187 - AluY SINE Alu -21 290 1 7422 165 31 124 chr10 102520101 102520556 -43068732 + MSTB-int LTR MaLR 419 915 -736 836 148 0 22 chr10 102520556 102520691 -43068597 + AluJb SINE Alu 1 132 -180 7422 165 31 124 chr10 102520691 102521537 -43067751 + MSTB-int LTR MaLR 915 1651 0 2224 164 81 5 chr10 102521537 102521933 -43067355 + MSTB LTR MaLR 1 426 0 2019 144 0 3 chr10 102521952 102522244 -43067044 - AluJo SINE Alu -21 291 1 405 289 28 28 chr10 102522259 102522401 -43066887 + LTR33 LTR ERVL 1 142 -379 334 240 42 21 chr10 102522497 102522593 -43066695 + LTR33 LTR ERVL 328 425 -96 183 80 0 0 chr10 102523293 102523318 -43065970 + (TTTTA)n Simple_repeat Simple_repeat 5 29 0 1354 135 12 20 chr10 102523430 102523675 -43065613 - L1MB3 LINE L1 0 6183 5941 337 246 140 62 chr10 102524171 102524260 -43065028 + Charlie8 DNA MER1_type 1 82 -2335 1732 179 14 7 chr10 102524260 102524556 -43064732 + AluJb SINE Alu 1 298 -14 337 246 140 62 chr10 102524556 102524645 -43064643 + Charlie8 DNA MER1_type 82 193 -2224 824 103 9 0 chr10 102524780 102524896 -43064392 + FLAM_C SINE Alu 1 117 -16 23 0 0 0 chr10 102524904 102524927 -43064361 + AT_rich Low_complexity Low_complexity 1 23 0 701 285 74 71 chr10 102525216 102525637 -43063651 - L3 LINE CR1 -1 1576 1155 210 406 16 8 chr10 102525662 102525790 -43063498 - L2 LINE L2 -7 3265 3137 403 354 58 29 chr10 102525855 102525927 -43063361 - L3 LINE CR1 -466 1111 1043 2480 184 58 40 chr10 102525927 102526481 -43062807 + MLT1F1 LTR MaLR 4 567 0 403 354 58 29 chr10 102526481 102526614 -43062674 - L3 LINE CR1 -534 1043 900 294 265 36 12 chr10 102526632 102526715 -43062573 - L3 LINE CR1 -789 788 704 279 353 8 16 chr10 102526730 102526852 -43062436 + MIR SINE MIR 25 145 -63 373 254 22 51 chr10 102526940 102527078 -43062210 + MLT1K LTR MaLR 16 149 -439 253 214 61 142 chr10 102527254 102527441 -43061847 - MLT1J LTR MaLR -264 351 110 389 324 33 28 chr10 102527640 102527822 -43061466 + MLT1K LTR MaLR 340 522 -66 374 254 67 120 chr10 102527851 102528209 -43061079 + MLT1F LTR MaLR 22 360 -182 316 250 75 50 chr10 102528198 102528318 -43060970 + MLT1F LTR MaLR 473 595 0 * 226 227 37 135 chr10 102528374 102528537 -43060751 + MIR SINE MIR 76 222 -40 291 293 144 43 chr10 102528579 102528767 -43060521 - L3 LINE CR1 -1128 449 243 3541 154 120 25 chr10 102529410 102529629 -43059659 + LTR39 LTR ERV1 1 198 -585 2367 71 0 16 chr10 102529629 102529937 -43059351 - AluY SINE Alu -8 303 1 3541 154 120 25 chr10 102529937 102530432 -43058856 + LTR39 LTR ERV1 198 783 0 962 109 21 31 chr10 102531654 102531846 -43057442 - L1MA5A LINE L1 -4 6293 6104 212 333 23 102 chr10 102532164 102532341 -43056947 - L2 LINE L2 -62 3210 3048 785 236 46 10 chr10 102532409 102532604 -43056684 - MIR SINE MIR -21 241 40 762 172 59 18 chr10 102533319 102533488 -43055800 + L1MB4 LINE L1 6005 6180 0 219 239 0 0 chr10 102533500 102533546 -43055742 + (CA)n Simple_repeat Simple_repeat 1 46 0 298 174 257 28 chr10 102533576 102533685 -43055603 + MLT1I LTR MaLR 273 406 -3 237 311 40 98 chr10 102533888 102534165 -43055123 - L2 LINE L2 -208 3064 2804 602 354 106 10 chr10 102534315 102534891 -43054397 - L2 LINE L2 -543 2771 2141 294 246 16 0 chr10 102535255 102535316 -43053972 + L2 LINE L2 3247 3308 -5 1414 212 45 19 chr10 102535490 102535868 -43053420 + L1ME3A LINE L1 5779 6166 -4 1932 142 0 34 chr10 102536005 102536328 -43052960 + AluSx SINE Alu 1 312 0 2267 104 7 0 chr10 102536620 102536918 -43052370 - AluSx SINE Alu -12 300 1 920 238 79 37 chr10 102536947 102537414 -43051874 + L1MEc LINE L1 628 1072 -5133 2900 137 45 14 chr10 102539105 102539596 -43049692 - MER84 LTR ERV1 0 507 2 265 154 154 15 chr10 102539596 102539661 -43049627 - MER84 LTR ERVI -433 74 1 251 297 47 0 chr10 102540449 102540577 -43048711 + L1MEc LINE L1 1313 1446 -4950 9769 121 17 28 chr10 102540585 102542583 -43046705 + L1MA3 LINE L1 1933 3914 -3651 1719 154 3 49 chr10 102542598 102542904 -43046384 - AluJb SINE Alu -20 292 1 725 222 6 0 chr10 102542927 102543107 -43046181 + L1MA3 LINE L1 4180 4360 -3205 * 6403 140 18 14 chr10 102543094 102543348 -43045940 + L1MA3 LINE L1 5492 5744 -1980 2406 70 0 26 chr10 102543348 102543660 -43045628 - AluY SINE Alu -7 304 1 6403 140 18 14 chr10 102543660 102545624 -43043664 + L1MA3 LINE L1 5744 7724 0 28 29 0 0 chr10 102545624 102545659 -43043629 + AT_rich Low_complexity Low_complexity 1 35 0 1042 267 37 35 chr10 102545702 102546107 -43043181 + L1MEc LINE L1 1487 1892 -4504 942 182 48 6 chr10 102546327 102546492 -43042796 + AluJo SINE Alu 1 172 -140 565 278 12 12 chr10 102547339 102547501 -43041787 + MIR SINE MIR 1 162 -100 722 239 65 25 chr10 102547528 102547729 -43041559 - MIR SINE MIR -52 210 2 195 321 131 0 chr10 102547733 102547817 -43041471 + MIR SINE MIR 166 260 -2 251 303 34 0 chr10 102548261 102548350 -43040938 + L2 LINE L2 3218 3309 -4 3047 162 28 5 chr10 102548541 102549120 -43040168 - L1MB3 LINE L1 -7 6176 5585 206 225 0 0 chr10 102549880 102549920 -43039368 + L2 LINE L2 2601 2640 -674 2293 80 7 0 chr10 102550104 102550392 -43038896 - AluSq SINE Alu -3 310 21 829 147 39 0 chr10 102550937 102551066 -43038222 - AluJo SINE Alu -178 134 1 584 183 7 51 chr10 102551120 102551257 -43038031 - MER94 DNA DNA -3 131 1 226 299 86 61 chr10 102551327 102551474 -43037814 - MIR SINE MIR -71 137 31 315 0 0 0 chr10 102551949 102551984 -43037304 + (CAAAA)n Simple_repeat Simple_repeat 3 37 0 301 303 59 91 chr10 102552204 102552511 -43036777 - L1M2 LINE L1 -5895 954 658 226 200 0 88 chr10 102553244 102553324 -43035964 - MIR3 SINE MIR -32 176 104 368 264 0 66 chr10 102554386 102554431 -43034857 - MER5B DNA MER1_type -77 101 55 1703 180 0 17 chr10 102554431 102554731 -43034557 - AluJb SINE Alu -15 297 3 368 264 0 66 chr10 102554731 102554791 -43034497 - MER5B DNA MER1_type -123 55 3 340 254 216 30 chr10 102556442 102556576 -43032712 - L2 LINE L2 -2 3270 3112 251 259 61 84 chr10 102557642 102557773 -43031515 + MIR SINE MIR 85 212 -50 216 271 51 0 chr10 102558479 102558538 -43030750 + L2 LINE L2 3211 3272 0 329 242 125 47 chr10 102558757 102559100 -43030188 - L1ME4a LINE L1 -11 6110 5741 27 81 0 0 chr10 102559103 102559165 -43030123 + AT_rich Low_complexity Low_complexity 1 62 0 321 215 13 0 chr10 102560874 102560953 -43028335 + MER116 DNA Mariner 1 80 0 410 336 75 46 chr10 102562475 102562820 -43026468 + L2 LINE L2 2409 2763 -551 987 204 73 73 chr10 102564655 102564984 -43024304 + MLT1G1 LTR MaLR 225 553 -42 1526 170 77 3 chr10 102565196 102565520 -43023768 + Charlie1b DNA MER1_type 1 348 -175 811 182 0 0 chr10 102565540 102565672 -43023616 + FRAM SINE Alu 6 137 -39 615 225 59 71 chr10 102565770 102566092 -43023196 + L1MC4a LINE L1 5550 5939 -1869 315 0 0 0 chr10 102566233 102566268 -43023020 + (TAAAA)n Simple_repeat Simple_repeat 2 36 0 203 105 26 26 chr10 102566342 102566380 -43022908 + (CATA)n Simple_repeat Simple_repeat 3 40 0 193 333 37 96 chr10 102566732 102566867 -43022421 - MIR SINE MIR -134 128 2 368 301 91 46 chr10 102567557 102567776 -43021512 - MIR SINE MIR -26 236 8 21 0 0 0 chr10 102567901 102567922 -43021366 + AT_rich Low_complexity Low_complexity 1 21 0 404 256 49 37 chr10 102568362 102568526 -43020762 - MLT1J2 LTR MaLR 0 450 285 308 201 144 86 chr10 102568601 102568740 -43020548 - MLT1J2 LTR MaLR -303 147 1 229 226 39 49 chr10 102568996 102569098 -43020190 + LTR67 LTR ERVL 426 526 -31 1926 135 23 7 chr10 102569098 102569401 -43019887 + AluSx SINE Alu 1 308 -4 1377 184 27 3 chr10 102569796 102570088 -43019200 - MER33 DNA MER1_type -1 323 25 321 177 139 0 chr10 102570088 102570167 -43019121 + LOR1a LTR ERV1 1 90 -407 2214 139 111 2 chr10 102570362 102570778 -43018510 + LOR1b LTR ERV1 1 461 0 521 269 65 32 chr10 102570848 102571064 -43018224 - MIR SINE MIR -9 253 31 353 134 82 82 chr10 102572550 102572647 -43016641 - L1MC4 LINE L1 -3 8039 7943 818 62 40 17 chr10 102572708 102572884 -43016404 + (TA)n Simple_repeat Simple_repeat 1 180 0 2280 151 25 5 chr10 102572951 102573355 -43015933 - MLT2C2 LTR ERVL -52 412 1 495 207 80 0 chr10 102573366 102573516 -43015772 - L1MC4 LINE L1 -201 7841 7680 625 218 147 82 chr10 102574002 102574369 -43014919 + MLT1L LTR MaLR 1 391 -224 450 279 50 60 chr10 102575932 102576133 -43013155 - MIR SINE MIR -18 244 46 188 389 23 15 chr10 102576255 102576386 -43012902 - L2 LINE L2 -2 3270 3139 379 273 151 40 chr10 102577362 102577803 -43011485 + L1ME4a LINE L1 5350 5834 -287 3643 100 14 2 chr10 102577818 102578309 -43010979 + L1PA13 LINE L1 5648 6144 -19 244 0 0 53 chr10 102578312 102578350 -43010938 + (TTTTG)n Simple_repeat Simple_repeat 5 40 0 2142 99 0 7 chr10 102578350 102578632 -43010656 - AluSx SINE Alu -32 280 1 26 64 0 0 chr10 102578732 102578779 -43010509 + AT_rich Low_complexity Low_complexity 1 47 0 185 128 256 0 chr10 102578783 102578822 -43010466 + MIR3 SINE MIR 127 175 -33 352 288 83 8 chr10 102578939 102579071 -43010217 - LTR16A1 LTR ERVL -6 451 310 1669 154 60 0 chr10 102579089 102579356 -43009932 - AluSx SINE Alu -28 284 2 232 178 44 0 chr10 102579416 102579461 -43009827 - LTR16A1 LTR ERVL -332 125 79 261 240 103 10 chr10 102579869 102579970 -43009318 - MIR SINE MIR -62 146 80 1918 162 3 0 chr10 102580035 102580331 -43008957 - AluJb SINE Alu -13 299 3 4296 172 25 10 chr10 102580385 102581183 -43008105 + L1MA10 LINE L1 5485 6294 -40 858 214 29 23 chr10 102581449 102581622 -43007666 - FRAM SINE Alu -3 173 1 26 0 0 0 chr10 102582150 102582176 -43007112 + AT_rich Low_complexity Low_complexity 1 26 0 2587 71 0 0 chr10 102582266 102582577 -43006711 - AluY SINE Alu 0 311 1 1508 211 21 0 chr10 102582577 102582862 -43006426 - AluJo SINE Alu -21 291 1 958 152 11 39 chr10 102583212 102583390 -43005898 - FRAM SINE Alu -7 169 1 2133 106 0 62 chr10 102583395 102583716 -43005572 - AluSx SINE Alu -11 301 1 820 291 12 25 chr10 102583797 102584041 -43005247 + MIR SINE MIR 1 241 -21 2179 107 3 3 chr10 102585716 102586016 -43003272 + AluSc SINE Alu 1 300 -9 41523 65 8 5 chr10 102586139 102592262 -42997026 + L1PA5 LINE L1 11 6154 0 213 39 0 0 chr10 102592319 102592345 -42996943 + (CAA)n Simple_repeat Simple_repeat 2 27 0 214 224 0 90 chr10 102592351 102592418 -42996870 + L2 LINE L2 3136 3196 -76 234 182 0 0 chr10 102592421 102592465 -42996823 + L1MC4a LINE L1 5777 5820 -1988 3999 190 16 9 chr10 102592471 102592713 -42996575 + L1MB8 LINE L1 5400 5639 -539 1903 173 18 12 chr10 102592713 102593054 -42996234 + MER61A LTR ERV1 1 343 0 3999 190 16 9 chr10 102593054 102593580 -42995708 + L1MB8 LINE L1 5639 6173 -5 2305 234 157 48 chr10 102593572 102593771 -42995517 + L1MC4a LINE L1 5806 5982 -1826 * 2121 104 0 63 chr10 102593771 102594089 -42995199 + AluSx SINE Alu 1 298 -14 2305 234 157 48 chr10 102594089 102594897 -42994391 + L1MC4a LINE L1 5982 6923 -885 1369 159 0 9 chr10 102594902 102595116 -42994172 + AluJb SINE Alu 86 297 -15 3252 205 85 30 chr10 102595122 102595253 -42994035 + L1MC4 LINE L1 7013 7135 -907 2046 122 17 0 chr10 102595253 102595549 -42993739 + AluSx SINE Alu 1 301 -11 3252 205 85 30 chr10 102595549 102596255 -42993033 + L1MC4 LINE L1 7135 7896 -146 234 150 67 33 chr10 102596258 102596318 -42992970 + L1MC4 LINE L1 7981 8042 0 * 2332 233 23 86 chr10 102596312 102597015 -42992273 + L1MC4 LINE L1 7034 7681 -361 1490 174 0 46 chr10 102597015 102597297 -42991991 - AluJb SINE Alu -43 269 1 2332 233 23 86 chr10 102597297 102597406 -42991882 + L1MC4 LINE L1 7681 7795 -247 238 127 0 237 chr10 102597420 102597538 -42991750 + L1MC4 LINE L1 7864 7953 -89 317 228 11 76 chr10 102597581 102597673 -42991615 + L2 LINE L2 3186 3271 -1 547 242 72 31 chr10 102597687 102597881 -42991407 - MLT1K LTR MaLR -8 580 379 873 192 137 28 chr10 102597885 102598170 -42991118 + MSTC LTR MaLR 6 372 -56 503 179 9 0 chr10 102598170 102598276 -42991012 + CT-rich Low_complexity Low_complexity 4 110 0 1724 155 10 55 chr10 102598279 102598589 -42990699 - AluJo SINE Alu -16 296 1 460 130 13 0 chr10 102598589 102598666 -42990622 + MSTC LTR MaLR 351 428 0 293 284 0 25 chr10 102599007 102599073 -42990215 + MER102b DNA MER1_type 1 64 -277 1130 202 48 78 chr10 102599073 102599430 -42989858 + MLT1A1 LTR MaLR 1 346 -19 725 232 33 62 chr10 102599443 102599684 -42989604 + MER102b DNA MER1_type 103 336 -5 788 265 28 29 chr10 102602231 102602607 -42986681 + L2 LINE L2 2714 3085 -228 2536 184 25 30 chr10 102602607 102603135 -42986153 - L1MB8 LINE L1 -23 6155 5631 594 250 113 34 chr10 102603137 102603341 -42985947 + L2 LINE L2 3094 3313 0 344 232 134 0 chr10 102603468 102603580 -42985708 + MIR3 SINE MIR 58 184 -24 209 169 68 34 chr10 102603648 102603707 -42985581 - L2 LINE L2 0 3313 3253 369 294 64 64 chr10 102604644 102604848 -42984440 - MIR SINE MIR -6 256 53 269 54 0 0 chr10 102606529 102606566 -42982722 - tRNA-Leu-CTT tRNA tRNA -48 37 1 227 150 25 0 chr10 102606612 102606652 -42982636 - MER5B DNA MER1_type 0 178 138 669 229 0 8 chr10 102606653 102606784 -42982504 - FLAM_A SINE Alu 0 142 13 432 293 50 7 chr10 102606790 102606930 -42982358 - MER5B DNA MER1_type -32 146 1 358 211 55 42 chr10 102607145 102607275 -42982013 + L1MD3 LINE L1 7633 7985 -10 1396 209 148 89 chr10 102607278 102608307 -42980981 - L1ME2 LINE L1 -75 6089 4995 268 305 76 48 chr10 102608699 102608804 -42980484 + L2 LINE L2 3197 3304 -9 251 198 66 33 chr10 102608819 102608910 -42980378 + L1ME4a LINE L1 5978 6071 -50 32 0 0 0 chr10 102609096 102609128 -42980160 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr10 102609548 102609569 -42979719 + AT_rich Low_complexity Low_complexity 1 21 0 1134 123 0 0 chr10 102609683 102609838 -42979450 - AluSg/x SINE Alu -21 291 137 1858 219 115 77 chr10 102611011 102611435 -42977853 - MER21B LTR ERV1 -133 730 269 3404 13 3 5 chr10 102611435 102611810 -42977478 - L1PA2 LINE L1 0 6155 5782 1858 219 115 77 chr10 102611810 102612073 -42977215 - MER21B LTR ERV1 -594 269 17 712 157 0 0 chr10 102612277 102612379 -42976909 + Tigger3b DNA MER2_type 1 102 -1129 * 5815 94 62 24 chr10 102612377 102612701 -42976587 + Tigger3b DNA MER2_type 274 584 -2444 2302 146 25 6 chr10 102612701 102613058 -42976230 - THE1B LTR MaLR 0 364 1 5815 94 62 24 chr10 102613058 102613656 -42975632 + Tigger3b DNA MER2_type 584 1231 0 334 325 24 8 chr10 102613666 102613789 -42975499 - MIR SINE MIR -63 145 21 391 338 7 7 chr10 102613829 102613971 -42975317 - MARNA DNA Mariner -338 248 107 699 46 0 0 chr10 102615163 102615250 -42974038 + (TTTC)n Simple_repeat Simple_repeat 2 88 0 1446 180 0 4 chr10 102615263 102615502 -42973786 - AluJb SINE Alu -69 243 6 200 318 95 21 chr10 102616008 102616113 -42973175 + MIR SINE MIR 40 151 -85 249 283 32 77 chr10 102616113 102616360 -42972928 + HsTC2 DNA Tc2 1 236 -1662 330 238 24 12 chr10 102616534 102616618 -42972670 + MIR SINE MIR 178 262 0 621 230 40 20 chr10 102616763 102616915 -42972373 + MER5B DNA MER1_type 2 156 -22 272 198 354 10 chr10 102616929 102617025 -42972263 + MER5B DNA MER1_type 2 130 -48 590 71 12 0 chr10 102617025 102617109 -42972179 + (TTTC)n Simple_repeat Simple_repeat 3 87 0 410 225 42 42 chr10 102620377 102620497 -42968791 - MER5A DNA MER1_type -20 169 50 287 266 77 42 chr10 102620381 102620524 -42968764 + MER5A DNA MER1_type 36 183 -6 * 430 181 14 0 chr10 102620574 102620646 -42968642 - MSTB LTR MaLR -353 73 1 317 250 15 0 chr10 102620681 102620749 -42968539 + L2 LINE L2 3203 3271 -1 2894 79 104 7 chr10 102620757 102620800 -42968488 - MLT2A1 LTR ERVL 0 444 407 972 61 22 28 chr10 102620800 102620980 -42968308 + (TA)n Simple_repeat Simple_repeat 2 180 0 2894 79 104 7 chr10 102620980 102621341 -42967947 - MLT2A1 LTR ERVL -37 407 1 241 312 34 122 chr10 102621341 102621694 -42967594 - L2 LINE L2 -31 3241 2920 645 132 23 16 chr10 102623077 102623206 -42966082 + L1MB7 LINE L1 5960 6089 -95 313 241 0 0 chr10 102623207 102623265 -42966023 - MER81 DNA DNA -56 58 1 1158 196 0 0 chr10 102623352 102623541 -42965747 - MER5A DNA MER1_type 0 189 1 30 27 0 0 chr10 102623585 102623622 -42965666 + AT_rich Low_complexity Low_complexity 1 37 0 2296 102 0 0 chr10 102623915 102624209 -42965079 - AluSx SINE Alu -18 294 1 341 240 39 0 chr10 102624327 102624431 -42964857 - L1ME4a LINE L1 -287 5834 5727 3656 231 101 78 chr10 102624742 102625151 -42964137 - L1MC4 LINE L1 -3 8039 7641 2056 135 0 7 chr10 102625151 102625448 -42963840 - AluSx SINE Alu -17 295 1 3656 231 101 78 chr10 102625448 102626074 -42963214 - L1MC4 LINE L1 -401 7641 7031 281 81 0 0 chr10 102626074 102626111 -42963177 + tRNA-Gly-GGA tRNA tRNA 2 38 -37 3656 231 101 78 chr10 102626111 102626694 -42962594 - L1MC4 LINE L1 -1011 7031 6345 33 25 0 0 chr10 102626724 102626764 -42962524 + AT_rich Low_complexity Low_complexity 1 40 0 283 282 93 37 chr10 102626769 102626985 -42962303 - L1MC4a LINE L1 -1470 6338 6111 335 267 139 49 chr10 102627004 102627457 -42961831 + MLT1F LTR MaLR 20 549 0 536 278 14 61 chr10 102627488 102627527 -42961761 - MLT1G LTR MaLR 0 590 551 2221 90 3 32 chr10 102627527 102627837 -42961451 + AluSc SINE Alu 1 301 -8 536 278 14 61 chr10 102627837 102628009 -42961279 - MLT1G LTR MaLR -39 551 389 545 174 10 31 chr10 102628041 102628139 -42961149 + MER2 DNA MER2_type 4 99 -246 1679 98 0 0 chr10 102628139 102628354 -42960934 + AluSg/x SINE Alu 84 298 -14 1127 108 0 18 chr10 102628879 102629045 -42960243 + AluSg/x SINE Alu 147 309 -1 182 156 22 0 chr10 102629055 102629100 -42960188 + (TA)n Simple_repeat Simple_repeat 2 47 0 256 278 0 0 chr10 102629100 102629190 -42960098 + L1MC4 LINE L1 6614 6703 -1339 638 162 0 19 chr10 102629202 102629307 -42959981 - LTR23 LTR ERV1 -35 402 300 404 359 44 6 chr10 102629320 102629479 -42959809 - LTR67 LTR ERVL -357 200 36 574 301 87 40 chr10 102629804 102630230 -42959058 - L1M4 LINE L1 -3023 3123 2678 2218 110 20 0 chr10 102630282 102630574 -42958714 - AluSx SINE Alu -14 298 1 222 209 0 0 chr10 102630747 102630790 -42958498 + GA-rich Low_complexity Low_complexity 2 44 0 472 222 146 38 chr10 102631551 102631736 -42957552 + MIR SINE MIR 16 220 -42 1284 254 124 33 chr10 102631762 102632124 -42957164 + L2 LINE L2 981 1395 -1919 2568 65 7 0 chr10 102632124 102632430 -42956858 - AluY SINE Alu -3 308 1 1284 254 124 33 chr10 102632430 102632527 -42956761 + L2 LINE L2 1395 1482 -1832 1091 265 196 18 chr10 102632528 102632973 -42956315 - MLT1G1 LTR MaLR 0 595 72 1418 149 21 37 chr10 102633118 102633360 -42955928 + AluJo SINE Alu 62 299 -13 496 253 95 37 chr10 102633662 102633722 -42955566 - MIR SINE MIR -45 217 162 2594 83 25 19 chr10 102633722 102634084 -42955204 - THE1B LTR MaLR 0 364 1 496 253 95 37 chr10 102634084 102634213 -42955075 - MIR SINE MIR -100 162 17 278 282 0 0 chr10 102636815 102636886 -42952402 + L2 LINE L2 3243 3313 0 198 351 32 0 chr10 102636895 102636989 -42952299 + MIR SINE MIR 51 147 -115 29 78 0 0 chr10 102637201 102637265 -42952023 + GC_rich Low_complexity Low_complexity 1 64 0 22 56 0 0 chr10 102637319 102637355 -42951933 + GC_rich Low_complexity Low_complexity 1 36 0 33 56 0 0 chr10 102637437 102637491 -42951797 + GC_rich Low_complexity Low_complexity 1 54 0 204 125 0 0 chr10 102639547 102639579 -42949709 + (TG)n Simple_repeat Simple_repeat 2 33 0 993 144 132 11 chr10 102640171 102640345 -42948943 - MER3 DNA MER1_type 0 209 15 250 266 16 0 chr10 102640482 102640546 -42948742 - MIR SINE MIR -22 240 176 863 221 128 30 chr10 102640573 102640871 -42948417 + MER46C DNA MER2_type 11 337 -1 577 260 20 0 chr10 102640871 102641021 -42948267 - MIR SINE MIR -107 155 3 207 0 0 0 chr10 102641064 102641087 -42948201 + (T)n Simple_repeat Simple_repeat 1 23 0 260 287 89 0 chr10 102641981 102642082 -42947206 + MIR SINE MIR 135 244 -18 1082 161 115 7 chr10 102642167 102642559 -42946729 + MLT1D LTR MaLR 3 505 0 1120 188 18 5 chr10 102642626 102642844 -42946444 - MIR SINE MIR -4 258 38 679 299 8 29 chr10 102643702 102643946 -42945342 + MIR SINE MIR 18 256 -6 24 32 0 0 chr10 102646041 102646072 -42943216 + AT_rich Low_complexity Low_complexity 1 31 0 844 181 0 13 chr10 102646316 102646465 -42942823 - LTR24 LTR ERV1 0 467 321 270 326 168 8 chr10 102646507 102646893 -42942395 - L1M4 LINE L1 -1887 4259 3812 2198 110 0 0 chr10 102647295 102647586 -42941702 + AluSg1 SINE Alu 1 291 -18 210 307 53 0 chr10 102648148 102648223 -42941065 - L2 LINE L2 -4 3309 3231 257 315 180 11 chr10 102649020 102649198 -42940090 + L2 LINE L2 2245 2452 -862 251 259 30 104 chr10 102649280 102649415 -42939873 + L2 LINE L2 3179 3303 -10 577 230 10 14 chr10 102649575 102649714 -42939574 + MIR SINE MIR 98 235 -27 355 304 35 23 chr10 102649838 102650009 -42939279 + MIR SINE MIR 20 192 -70 679 263 18 0 chr10 102650107 102650278 -42939010 + L3 LINE CR1 612 785 -792 24 0 0 0 chr10 102650948 102650972 -42938316 + AT_rich Low_complexity Low_complexity 1 24 0 189 0 0 0 chr10 102651004 102651025 -42938263 + (T)n Simple_repeat Simple_repeat 1 21 0 204 40 0 0 chr10 102651124 102651149 -42938139 + (T)n Simple_repeat Simple_repeat 1 25 0 1941 147 0 44 chr10 102651324 102651643 -42937645 + AluJb SINE Alu 1 305 -7 2084 151 0 0 chr10 102651736 102652035 -42937253 - AluSx SINE Alu -11 301 3 2590 129 28 28 chr10 102652453 102652879 -42936409 - MSTB LTR MaLR 0 426 1 8499 169 51 13 chr10 102652879 102654469 -42934819 - MSTB-int LTR MaLR 0 1651 1 2574 159 19 9 chr10 102654469 102654891 -42934397 - MSTB LTR MaLR 0 426 1 1022 124 26 0 chr10 102655916 102656069 -42933219 + AluSg/x SINE Alu 135 291 -21 243 259 123 0 chr10 102656287 102656368 -42932920 + LTR67 LTR ERVL 460 550 -7 210 301 32 11 chr10 102656397 102656490 -42932798 - L2 LINE L2 -1 3271 3177 275 272 87 0 chr10 102656610 102656702 -42932586 - MER103 DNA DNA -52 114 15 941 314 82 53 chr10 102656742 102657787 -42931501 + L1ME3A LINE L1 3523 4598 -1548 1716 170 7 17 chr10 102658171 102658308 -42930980 + AluJb SINE Alu 1 138 -174 183 42 0 0 chr10 102658308 102658332 -42930956 + (CAA)n Simple_repeat Simple_repeat 2 25 0 1716 170 7 17 chr10 102658332 102658483 -42930805 + AluJb SINE Alu 138 286 -26 183 42 0 0 chr10 102658483 102658507 -42930781 + (GA)n Simple_repeat Simple_repeat 2 25 0 749 285 66 73 chr10 102658860 102659501 -42929787 + L1ME3A LINE L1 5289 5927 -243 222 37 0 0 chr10 102659505 102659532 -42929756 + (TTAA)n Simple_repeat Simple_repeat 1 27 0 1929 160 3 0 chr10 102659537 102659824 -42929464 - AluJo SINE Alu -24 288 1 26 30 0 0 chr10 102659835 102659868 -42929420 + AT_rich Low_complexity Low_complexity 1 33 0 5734 136 29 37 chr10 102660041 102661125 -42928163 + L1MC1 LINE L1 5137 6211 -122 833 142 0 0 chr10 102661125 102661252 -42928036 - FRAM SINE Alu -13 163 37 741 123 0 123 chr10 102661252 102661406 -42927882 + L1MC1 LINE L1 6199 6333 0 303 258 86 33 chr10 102661637 102661788 -42927500 + L1M4 LINE L1 4872 5030 -1116 272 324 95 27 chr10 102662179 102662327 -42926961 - MIR SINE MIR -8 254 97 1866 154 0 77 chr10 102662327 102662665 -42926623 - AluJo SINE Alu 0 312 1 679 257 45 65 chr10 102662698 102662943 -42926345 - MER112 DNA MER1_type -20 240 1 255 286 48 0 chr10 102663496 102663580 -42925708 - MIR SINE MIR -109 153 66 21 0 0 0 chr10 102664331 102664352 -42924936 + AT_rich Low_complexity Low_complexity 1 21 0 189 280 13 13 chr10 102664681 102664756 -42924532 + L2 LINE L2 3239 3313 0 1968 125 0 45 chr10 102664989 102665302 -42923986 - AluJo SINE Alu -13 299 1 1968 198 68 53 chr10 102665643 102665756 -42923532 - MLT1D LTR MaLR 0 505 395 2250 98 13 3 chr10 102665756 102666063 -42923225 + AluY SINE Alu 1 310 -1 1968 198 68 53 chr10 102666063 102666438 -42922850 - MLT1D LTR MaLR -110 395 10 322 207 134 24 chr10 102666637 102666719 -42922569 - MIR SINE MIR -142 120 30 1121 194 40 5 chr10 102667505 102667727 -42921561 - MLT1A1 LTR MaLR 0 365 136 927 228 24 78 chr10 102667729 102668149 -42921139 + MLT1A2 LTR MaLR 1 368 -6 1324 216 29 76 chr10 102668151 102668601 -42920687 + L1ME2 LINE L1 5727 6155 -9 969 258 36 39 chr10 102668761 102669048 -42920240 + MLT1H1 LTR MaLR 1 289 -291 591 156 66 3 chr10 102669048 102669232 -42920056 - MER2 DNA MER2_type -24 321 85 773 215 41 41 chr10 102669243 102669438 -42919850 - MER74A LTR ERVL -68 490 296 7337 65 14 13 chr10 102669443 102670945 -42918343 - SVA Other Other -756 1386 115 1263 201 54 4 chr10 102670984 102671243 -42918045 + L1P LINE L1 11 282 -5864 526 257 91 62 chr10 102672393 102672700 -42916588 - L2 LINE L2 0 3313 2998 409 79 32 0 chr10 102673116 102673179 -42916109 - L1MB3 LINE L1 -7 6176 6112 1046 155 0 6 chr10 102673184 102673345 -42915943 + AluJo SINE Alu 12 171 -141 676 180 8 8 chr10 102673378 102673500 -42915788 - L1MB3 LINE L1 -57 6126 6005 274 312 72 0 chr10 102673653 102673778 -42915510 + MER5A DNA MER1_type 55 188 -1 394 316 86 23 chr10 102673850 102674024 -42915264 + MIR SINE MIR 35 219 -43 228 184 20 0 chr10 102674781 102674830 -42914458 + L2 LINE L2 3264 3313 0 29 0 0 0 chr10 102675074 102675103 -42914185 + AT_rich Low_complexity Low_complexity 1 29 0 1996 129 87 6 chr10 102675115 102675448 -42913840 - MER46B DNA MER2_type -1 235 1 265 215 283 47 chr10 102675462 102675653 -42913635 + L1ME4a LINE L1 5883 6118 -3 271 289 82 0 chr10 102677958 102678055 -42911233 - MIR SINE MIR -113 149 45 349 301 11 0 chr10 102678103 102678196 -42911092 + MER91A DNA MER1_type 12 105 -91 3115 211 67 39 chr10 102678212 102678390 -42910898 - L1ME2 LINE L1 -76 6088 5916 1237 150 0 19 chr10 102678390 102678603 -42910685 + MER3 DNA MER1_type 1 209 0 3115 211 67 39 chr10 102678603 102679564 -42909724 - L1ME2 LINE L1 -248 5916 4908 2023 211 63 44 chr10 102679559 102679669 -42909619 - L1M4 LINE L1 -762 5384 5278 * 2001 166 0 3 chr10 102679669 102679982 -42909306 - AluSx SINE Alu 0 312 1 2023 211 63 44 chr10 102679982 102680597 -42908691 - L1M4 LINE L1 -868 5278 4645 1504 271 52 8 chr10 102680585 102681241 -42908047 + L1M4 LINE L1 3809 4493 -1653 * 234 274 0 0 chr10 102681241 102681343 -42907945 + (TA)n Simple_repeat Simple_repeat 1 102 0 240 250 25 50 chr10 102681388 102681508 -42907780 + L1M4 LINE L1 4515 4631 -1515 454 217 78 83 chr10 102683706 102683788 -42905500 + MIR SINE MIR 84 165 -97 1401 243 139 13 chr10 102683788 102684240 -42905048 - MLT1J LTR MaLR -1 510 2 454 217 78 83 chr10 102684240 102684337 -42904951 + MIR SINE MIR 165 262 0 510 381 44 7 chr10 102684420 102684690 -42904598 - L3 LINE CR1 -85 1492 1213 1034 256 5 0 chr10 102684725 102684948 -42904340 - MER58A DNA MER1_type 0 224 1 251 176 0 0 chr10 102685044 102685095 -42904193 - L1M4 LINE L1 -1973 4173 4123 268 318 35 0 chr10 102685812 102685897 -42903391 - MIR SINE MIR -87 175 88 248 387 9 0 chr10 102685940 102686046 -42903242 + L2 LINE L2 2946 3052 -220 2183 107 0 4 chr10 102686391 102686722 -42902566 + AluSc SINE Alu 1 330 0 514 294 14 0 chr10 102686809 102686955 -42902333 + MIR SINE MIR 1 148 -114 2256 183 136 6 chr10 102686967 102687469 -42901819 - MLT1F1 LTR MaLR 0 567 1 1399 144 40 0 chr10 102687518 102687720 -42901568 + AluJb SINE Alu 1 210 -102 836 164 7 0 chr10 102687721 102687861 -42901427 + MLT1F1 LTR MaLR 6 146 -421 529 200 0 0 chr10 102687863 102687999 -42901289 + AluSc SINE Alu 199 334 0 326 351 22 22 chr10 102688195 102688380 -42900908 + L1ME4a LINE L1 5843 6027 -94 675 271 13 13 chr10 102688840 102689076 -42900212 - L1MEc LINE L1 -4694 1702 1467 * 961 256 34 14 chr10 102689072 102689369 -42899919 - L1MEc LINE L1 -6057 339 37 645 247 87 0 chr10 102691526 102691757 -42897531 - Charlie4a DNA MER1_type -7 501 251 911 168 59 44 chr10 102691869 102692072 -42897216 - MER2 DNA MER2_type -139 206 1 206 232 43 0 chr10 102692092 102692161 -42897127 + (TA)n Simple_repeat Simple_repeat 1 72 0 395 256 56 0 chr10 102692164 102692254 -42897034 - MER81 DNA DNA -19 95 1 * 1045 206 4 13 chr10 102692254 102692485 -42896803 - Charlie4a DNA MER1_type -263 245 17 236 340 105 19 chr10 102692495 102692657 -42896631 - L3 LINE CR1 -255 1322 1147 225 0 0 0 chr10 102692754 102692779 -42896509 + (CAT)n Simple_repeat Simple_repeat 3 27 0 2102 147 28 8 chr10 102692779 102693132 -42896156 - THE1B LTR MaLR 0 364 5 554 323 37 9 chr10 102693150 102693382 -42895906 - MIR SINE MIR -5 257 21 416 246 25 25 chr10 102693551 102693669 -42895619 + MER5B DNA MER1_type 61 178 0 409 309 113 36 chr10 102694866 102695034 -42894254 + MIR SINE MIR 12 192 -70 4371 138 48 38 chr10 102697554 102698234 -42891054 - L1MB8 LINE L1 0 6178 5489 2194 119 0 13 chr10 102698234 102698537 -42890751 - AluSx SINE Alu -13 299 1 4371 138 48 38 chr10 102698537 102698803 -42890485 - L1MB8 LINE L1 -689 5489 5227 752 183 0 0 chr10 102698980 102699106 -42890182 - FLAM_C SINE Alu -6 127 2 435 235 150 7 chr10 102699378 102699531 -42889757 - MER96 DNA MER1_type 0 175 1 1204 216 22 0 chr10 102699642 102699911 -42889377 + MER58B DNA MER1_type 67 341 0 216 289 175 0 chr10 102699911 102700025 -42889263 + L2 LINE L2 2956 3089 -183 323 258 15 0 chr10 102700735 102700801 -42888487 + MIR SINE MIR 42 108 -100 211 225 0 0 chr10 102700848 102700888 -42888400 - L2 LINE L2 -14 3258 3219 188 315 0 19 chr10 102701287 102701341 -42887947 - MIR SINE MIR -197 65 13 232 281 116 16 chr10 102703059 102703180 -42886108 - MARNA DNA Mariner -26 560 428 287 292 58 50 chr10 102703484 102703604 -42885684 - MER91A DNA MER1_type -67 129 9 1455 190 61 24 chr10 102703846 102704141 -42885147 - AluJo SINE Alu -6 306 1 753 194 0 0 chr10 102704158 102704287 -42885001 - AluJb SINE Alu -183 129 1 372 308 21 21 chr10 102704300 102704443 -42884845 - MIR3 SINE MIR -45 163 21 1236 61 0 0 chr10 102704670 102704817 -42884471 + AluY SINE Alu 1 147 -164 527 253 82 16 chr10 102705276 102705458 -42883830 - MIR3 SINE MIR 0 208 15 536 238 116 37 chr10 102705551 102705715 -42883573 + MIR SINE MIR 10 186 -76 35 78 0 0 chr10 102705817 102705894 -42883394 + AT_rich Low_complexity Low_complexity 1 77 0 530 75 50 0 chr10 102705897 102705977 -42883311 - HY4 scRNA scRNA -9 84 1 272 117 100 0 chr10 102706764 102706824 -42882464 + L1MB5 LINE L1 6100 6165 -9 1249 259 66 35 chr10 102706842 102707505 -42881783 - L1ME3A LINE L1 -221 5949 5266 301 226 21 54 chr10 102707513 102707606 -42881682 + L1MC4 LINE L1 6614 6703 -1339 219 69 0 0 chr10 102707608 102707637 -42881651 + (GA)n Simple_repeat Simple_repeat 2 30 0 1584 187 22 7 chr10 102707637 102707915 -42881373 - AluJo SINE Alu -30 282 1 301 255 66 27 chr10 102707959 102708252 -42881036 - L1ME3A LINE L1 -918 5228 4916 243 79 0 0 chr10 102708427 102708465 -42880823 + (TCTG)n Simple_repeat Simple_repeat 2 39 0 1432 239 48 14 chr10 102708473 102708912 -42880376 - L1ME3A LINE L1 -11 6159 5706 1909 148 18 44 chr10 102708987 102709371 -42879917 - THE1C LTR MaLR -1 374 1 26 50 0 0 chr10 102709542 102709582 -42879706 + AT_rich Low_complexity Low_complexity 1 40 0 326 77 0 0 chr10 102710106 102710158 -42879130 + Alu SINE Alu 249 300 0 213 371 60 17 chr10 102710853 102710969 -42878319 + L2 LINE L2 3150 3270 -2 198 167 0 0 chr10 102711475 102711511 -42877777 + T-rich Low_complexity Low_complexity 1 36 0 570 237 174 36 chr10 102711960 102712179 -42877109 + MIR SINE MIR 8 256 -6 238 285 39 39 chr10 102712347 102712477 -42876811 + L2 LINE L2 3136 3265 -7 906 249 76 14 chr10 102713083 102713372 -42875916 + MLT1J2 LTR MaLR 2 308 -142 2475 86 0 0 chr10 102713582 102713886 -42875402 + AluY SINE Alu 1 304 -7 198 213 66 16 chr10 102714009 102714070 -42875218 + MIR SINE MIR 134 197 -65 29 0 0 0 chr10 102714083 102714112 -42875176 + AT_rich Low_complexity Low_complexity 1 29 0 2048 137 0 22 chr10 102714154 102714469 -42874819 - AluSx SINE Alu -4 308 1 523 306 21 0 chr10 102714477 102714621 -42874667 + MIR SINE MIR 30 176 -86 3049 170 20 25 chr10 102715477 102716118 -42873170 - L1MB7 LINE L1 -5 6179 5542 278 263 93 76 chr10 102716113 102716467 -42872821 - L1ME4a LINE L1 -224 5897 5538 * 937 174 83 9 chr10 102716519 102716737 -42872551 - MLT1E3 LTR MaLR 0 624 391 257 309 57 32 chr10 102717522 102717645 -42871643 + MIR3 SINE MIR 82 207 -1 312 325 63 48 chr10 102718975 102719181 -42870107 + MIR SINE MIR 41 249 -13 191 271 188 0 chr10 102719293 102719378 -42869910 + MIR SINE MIR 20 120 -142 2151 112 7 20 chr10 102719547 102719850 -42869438 - AluJb SINE Alu -13 299 1 719 144 0 50 chr10 102720427 102720566 -42868722 + FLAM_C SINE Alu 12 143 0 936 251 38 8 chr10 102720749 102720984 -42868304 + MIR SINE MIR 21 262 0 254 376 104 0 chr10 102720990 102721115 -42868173 + MIR SINE MIR 6 143 -119 873 197 0 0 chr10 102721128 102721275 -42868013 - FAM SINE Alu -6 43 1 331 222 37 65 chr10 102721311 102721419 -42867869 + MIR SINE MIR 155 259 -3 210 105 0 0 chr10 102721429 102721467 -42867821 + (T)n Simple_repeat Simple_repeat 1 38 0 198 94 0 31 chr10 102722288 102722320 -42866968 + L2 LINE L2 3261 3291 -22 339 315 61 90 chr10 102722437 102722894 -42866394 - L2 LINE L2 -19 3253 2810 1842 156 35 0 chr10 102723122 102723410 -42865878 + AluJb SINE Alu 4 301 -11 460 247 123 19 chr10 102723435 102723597 -42865691 + MIR SINE MIR 48 226 -36 250 387 40 32 chr10 102724418 102724542 -42864746 + L2 LINE L2 3133 3257 -15 345 278 0 0 chr10 102725113 102725203 -42864085 + L2 LINE L2 3220 3309 -4 220 390 84 19 chr10 102725491 102725860 -42863428 + L2 LINE L2 1053 1445 -1869 266 317 25 42 chr10 102726079 102726199 -42863089 + MER5A DNA MER1_type 38 155 -34 252 317 19 29 chr10 102726219 102726323 -42862965 + L2 LINE L2 2639 2741 -573 581 237 182 48 chr10 102726343 102726798 -42862490 - LTR33 LTR ERVL -3 518 3 245 342 59 37 chr10 102726963 102727150 -42862138 + L2 LINE L2 2916 3106 -166 1115 197 166 0 chr10 102727173 102727468 -42861820 - MER2 DNA MER2_type 0 344 1 861 207 108 10 chr10 102727468 102727663 -42861625 - MIR SINE MIR -5 257 40 357 303 28 90 chr10 102727698 102727876 -42861412 + L2 LINE L2 3104 3270 -2 241 327 170 19 chr10 102727870 102728029 -42861259 - MIR SINE MIR -16 192 10 * 1917 136 0 44 chr10 102728167 102728499 -42860789 + AluSx SINE Alu 1 319 0 411 281 66 38 chr10 102729802 102729985 -42859303 - MIR SINE MIR -30 232 41 1873 155 7 7 chr10 102730339 102730648 -42858640 - AluJo SINE Alu -3 309 1 309 245 128 0 chr10 102730865 102730959 -42858329 + MIR SINE MIR 44 149 -113 2259 92 0 3 chr10 102731114 102731406 -42857882 - AluY SINE Alu 0 311 21 242 240 0 0 chr10 102731407 102731457 -42857831 + Charlie8 DNA MER1_type 2364 2413 -4 375 241 45 150 chr10 102732477 102732568 -42856720 - MER117 DNA MER1_type 0 197 98 2213 170 110 5 chr10 102732568 102732985 -42856303 - LOR1b LTR ERV1 0 461 1 375 241 45 150 chr10 102732985 102733034 -42856254 - MER117 DNA MER1_type -99 98 86 1663 129 51 44 chr10 102733034 102733328 -42855960 - AluJo SINE Alu -4 308 13 375 241 45 150 chr10 102733328 102733406 -42855882 - MER117 DNA MER1_type -111 86 1 192 349 74 65 chr10 102733865 102734189 -42855099 + L2 LINE L2 2932 3258 -14 599 287 63 20 chr10 102734731 102734953 -42854335 - MIR SINE MIR -2 260 26 384 59 0 0 chr10 102734953 102735004 -42854284 + (TG)n Simple_repeat Simple_repeat 2 52 0 599 287 63 20 chr10 102735004 102735029 -42854259 - MIR SINE MIR -236 26 4 1340 156 24 5 chr10 102736020 102736232 -42853056 + MER20 DNA MER1_type 3 218 -1 1757 150 3 27 chr10 102736346 102736639 -42852649 + AluJo SINE Alu 20 305 -7 787 237 117 23 chr10 102736769 102737035 -42852253 + MER46C DNA MER2_type 6 296 -42 2206 100 7 0 chr10 102737343 102737632 -42851656 - AluSg1 SINE Alu -18 291 1 198 301 164 44 chr10 102737655 102737838 -42851450 - MIR SINE MIR -3 259 55 1629 52 5 0 chr10 102738266 102738460 -42850828 + L1PA7 LINE L1 5960 6154 0 22 56 0 0 chr10 102738460 102738496 -42850792 + AT_rich Low_complexity Low_complexity 1 36 0 321 262 124 21 chr10 102739085 102739230 -42850058 + L2 LINE L2 2900 3059 -254 314 271 85 33 chr10 102739895 102740367 -42848921 - L1M4 LINE L1 -726 5458 4955 354 261 0 0 chr10 102740398 102740490 -42848798 - L1M4 LINE L1 -1952 4194 4103 467 241 118 48 chr10 102740494 102740701 -42848587 - MIR SINE MIR -37 225 3 409 183 157 9 chr10 102741397 102741512 -42847776 + L2 LINE L2 3141 3272 0 731 220 17 10 chr10 102741548 102741776 -42847512 + L1M4 LINE L1 4297 4521 -1625 539 262 43 0 chr10 102742267 102742430 -42846858 - MIR SINE MIR -58 150 6 296 300 36 0 chr10 102742812 102742922 -42846366 + MIR SINE MIR 147 260 -2 23 33 0 0 chr10 102743066 102743096 -42846192 + AT_rich Low_complexity Low_complexity 1 30 0 199 341 125 11 chr10 102743194 102743370 -42845918 + MIR3 SINE MIR 2 197 -11 347 258 94 23 chr10 102743910 102744038 -42845250 - MIR SINE MIR 0 262 126 274 303 13 0 chr10 102744826 102744902 -42844386 - L2 LINE L2 -6 3307 3231 345 241 46 11 chr10 102745019 102745106 -42844182 - MARNA DNA Mariner -100 486 397 * 1028 244 33 12 chr10 102745048 102745290 -42843998 + MARNA DNA Mariner 132 378 -208 496 330 26 10 chr10 102745606 102745800 -42843488 + MIR SINE MIR 28 224 -38 2141 142 0 6 chr10 102745915 102746226 -42843062 + AluJb SINE Alu 1 309 -3 318 293 80 33 chr10 102746232 102746290 -42842998 - MIR3 SINE MIR -10 198 144 1486 188 23 33 chr10 102746290 102746593 -42842695 - AluJo SINE Alu -12 300 1 318 293 80 33 chr10 102746593 102746684 -42842604 - MIR3 SINE MIR -64 144 42 706 241 19 0 chr10 102746989 102747147 -42842141 + MIR SINE MIR 101 261 -1 23 0 0 0 chr10 102749890 102749913 -42839375 + AT_rich Low_complexity Low_complexity 1 23 0 253 275 14 0 chr10 102750234 102750303 -42838985 - MER5A DNA MER1_type -2 187 118 219 342 103 0 chr10 102751175 102751292 -42837996 - MIR SINE MIR -3 259 131 2913 3 0 0 chr10 102752781 102753091 -42836197 - AluYa5 SINE Alu -1 310 1 243 238 111 0 chr10 102753104 102753167 -42836121 - L2 LINE L2 -25 3247 3178 260 196 59 0 chr10 102753228 102753279 -42836009 - MER20 DNA MER1_type -165 54 1 207 298 90 53 chr10 102753311 102753499 -42835789 - L2 LINE L2 -168 3104 2910 252 0 0 0 chr10 102754171 102754199 -42835089 + (TTTC)n Simple_repeat Simple_repeat 1 28 0 1396 153 0 0 chr10 102754221 102754423 -42834865 - AluJb SINE Alu -26 286 85 264 313 199 17 chr10 102754535 102754711 -42834577 - MIR SINE MIR -35 227 20 2556 120 27 3 chr10 102755147 102755513 -42833775 - THE1C LTR MaLR 0 375 1 315 333 38 0 chr10 102755867 102755999 -42833289 - MIR3 SINE MIR -15 193 57 368 248 77 26 chr10 102756263 102756380 -42832908 - L2 LINE L2 0 3313 3191 185 310 157 35 chr10 102756602 102756863 -42832425 - L2 LINE L2 -672 2642 2350 930 228 67 72 chr10 102757090 102757551 -42831737 - L1MC5 LINE L1 -50 7911 7453 316 333 35 14 chr10 102757952 102758096 -42831192 + MIR SINE MIR 37 183 -79 353 320 225 10 chr10 102758166 102758366 -42830922 - MIR SINE MIR -19 243 1 318 269 51 65 chr10 102758850 102759037 -42830251 + MIR SINE MIR 18 199 -63 191 275 242 27 chr10 102759703 102759852 -42829436 - L2 LINE L2 -177 3095 2915 184 263 106 84 chr10 102759968 102760147 -42829141 + MIR3 SINE MIR 3 185 -23 238 311 47 19 chr10 102760977 102761083 -42828205 - MIR SINE MIR -19 243 135 257 261 189 7 chr10 102761259 102761412 -42827876 - L1MC/D LINE L1 -741 5501 5321 277 276 31 47 chr10 102761421 102761548 -42827740 - MIR SINE MIR -63 145 21 566 251 180 33 chr10 102761982 102762193 -42827095 - MIR SINE MIR -14 248 7 680 70 0 0 chr10 102762419 102762505 -42826783 + L1PA7 LINE L1 6064 6149 -5 215 280 20 0 chr10 102762825 102762875 -42826413 - L3b LINE CR1 -254 1329 1279 413 280 233 0 chr10 102763009 102763198 -42826090 - MIR SINE MIR -4 258 26 442 289 50 13 chr10 102763939 102764098 -42825190 - MIR3 SINE MIR -7 201 37 356 240 10 62 chr10 102764448 102764544 -42824744 + L2 LINE L2 3222 3312 -1 974 244 50 0 chr10 102764719 102764957 -42824331 - MIR SINE MIR -3 259 10 701 268 102 45 chr10 102765065 102765536 -42823752 - L1MC4a LINE L1 -133 5988 5491 300 53 0 0 chr10 102765759 102765797 -42823491 + (TC)n Simple_repeat Simple_repeat 1 38 0 22 0 0 0 chr10 102766742 102766764 -42822524 + AT_rich Low_complexity Low_complexity 1 22 0 246 359 75 24 chr10 102767237 102767449 -42821839 + MIR SINE MIR 33 255 -7 208 319 44 22 chr10 102767810 102767901 -42821387 - MIR SINE MIR -82 126 34 1754 125 0 0 chr10 102768232 102768464 -42820824 + AluSx SINE Alu 62 293 -19 2607 61 0 0 chr10 102768897 102769207 -42820081 - AluY SINE Alu -1 310 1 332 292 84 33 chr10 102769234 102769508 -42819780 + L1ME4a LINE L1 5653 5940 -181 804 157 35 58 chr10 102769722 102769894 -42819394 - MER20 DNA MER1_type -51 168 1 249 244 146 12 chr10 102770537 102770619 -42818669 - L1ME LINE L1 -462 5659 5567 30 27 0 0 chr10 102771013 102771050 -42818238 + AT_rich Low_complexity Low_complexity 1 37 0 439 188 0 0 chr10 102771145 102771225 -42818063 - MER116 DNA Mariner 0 80 1 538 189 53 65 chr10 102771421 102771590 -42817698 + MER5B DNA MER1_type 12 178 0 308 103 103 17 chr10 102771755 102771813 -42817475 - L2 LINE L2 -5 3308 3246 1080 177 73 32 chr10 102771875 102772123 -42817165 + L1MB8 LINE L1 5921 6178 0 481 213 200 19 chr10 102772376 102772531 -42816757 - MIR SINE MIR -10 252 70 7812 33 18 0 chr10 102773606 102774593 -42814695 - L1PA5 LINE L1 -1 6153 5171 2265 116 0 0 chr10 102775259 102775552 -42813736 + AluSx SINE Alu 1 293 -19 2489 118 19 27 chr10 102777255 102777621 -42811667 + THE1B LTR MaLR 1 363 -1 590 303 54 89 chr10 102778372 102778722 -42810566 + L2 LINE L2 2935 3272 0 192 241 37 19 chr10 102779928 102779982 -42809306 - MIR SINE MIR -14 248 194 257 325 56 24 chr10 102781399 102781525 -42807763 - L2 LINE L2 -2 3270 3141 1160 177 6 0 chr10 102781607 102781788 -42807500 - MER5A DNA MER1_type -4 185 4 191 333 73 64 chr10 102781834 102782053 -42807235 - L2 LINE L2 -30 3242 3022 1904 138 7 0 chr10 102782970 102783253 -42806035 + AluJo SINE Alu 27 311 -1 310 243 7 136 chr10 102783279 102783419 -42805869 - MIR3 SINE MIR -8 200 79 201 308 87 19 chr10 102783428 102783532 -42805756 + L2 LINE L2 3153 3263 -9 524 186 97 28 chr10 102783941 102784086 -42805202 - L2 LINE L2 0 3313 3159 1130 84 0 0 chr10 102784245 102784387 -42804901 - AluY SINE Alu -18 293 152 327 227 86 23 chr10 102784392 102784520 -42804768 + MIR SINE MIR 127 262 0 314 191 206 85 chr10 102785276 102785417 -42803871 + L2 LINE L2 3156 3313 0 343 343 97 5 chr10 102785791 102785998 -42803290 + MIR SINE MIR 6 231 -31 764 238 92 90 chr10 102786004 102786449 -42802839 - MLT1H LTR MaLR 0 549 104 1016 232 52 8 chr10 102786499 102786749 -42802539 - MIR SINE MIR -1 261 1 2216 112 3 0 chr10 102786834 102787129 -42802159 - AluSg SINE Alu -11 299 4 201 186 105 128 chr10 102787501 102787587 -42801701 + L2 LINE L2 3173 3256 -16 474 239 107 19 chr10 102787686 102787845 -42801443 - Charlie8 DNA MER1_type -2152 265 93 193 242 63 21 chr10 102788019 102788114 -42801174 - L2 LINE L2 -1298 2016 1918 336 198 81 27 chr10 102788171 102788282 -42801006 + MER103 DNA DNA 7 123 -43 302 222 91 20 chr10 102789255 102789354 -42799934 - MIR SINE MIR -36 226 121 315 275 262 27 chr10 102789794 102789943 -42799345 + L2 LINE L2 3089 3272 0 217 321 23 46 chr10 102790160 102790291 -42798997 + L2 LINE L2 3145 3272 0 186 281 164 39 chr10 102790625 102790753 -42798535 - L2 LINE L2 -114 3158 3015 2432 83 0 0 chr10 102791515 102791816 -42797472 + AluY SINE Alu 1 301 -10 330 189 263 0 chr10 102792617 102792712 -42796576 - L2 LINE L2 -1 3312 3193 2217 120 7 0 chr10 102792944 102793245 -42796043 - AluSx SINE Alu -9 303 1 727 130 49 0 chr10 102793324 102793447 -42795841 + L1MA8 LINE L1 6145 6273 -18 924 126 14 0 chr10 102793973 102794116 -42795172 + L1MA8 LINE L1 6145 6289 -2 1534 169 14 14 chr10 102794983 102795262 -42794026 + L1MB3 LINE L1 5896 6174 -9 2481 55 0 3 chr10 102795756 102796047 -42793241 + AluY SINE Alu 1 290 -21 2299 107 0 3 chr10 102797844 102798152 -42791136 + AluSx SINE Alu 1 307 -5 21 71 0 0 chr10 102798894 102798936 -42790352 + AT_rich Low_complexity Low_complexity 1 42 0 1568 144 4 39 chr10 102799124 102799380 -42789908 + AluSx SINE Alu 31 277 -35 213 39 0 0 chr10 102800290 102800316 -42788972 + (GGGAGA)n Simple_repeat Simple_repeat 4 29 0 469 38 0 85 chr10 102800316 102800422 -42788866 + (GGGAA)n Simple_repeat Simple_repeat 1 97 0 672 149 21 7 chr10 102800424 102800565 -42788723 + GA-rich Low_complexity Low_complexity 3 145 0 380 267 30 0 chr10 102800969 102801070 -42788218 + MIR SINE MIR 111 214 -48 1309 208 0 39 chr10 102801074 102801382 -42787906 + AluJo SINE Alu 11 306 -6 219 203 0 0 chr10 102801428 102801487 -42787801 + (ATG)n Simple_repeat Simple_repeat 2 60 0 375 278 214 6 chr10 102801725 102801898 -42787390 - L2 LINE L2 0 3313 3105 283 330 11 11 chr10 102802986 102803074 -42786214 - MIR SINE MIR -163 99 12 213 65 0 0 chr10 102803129 102803160 -42786128 + (TG)n Simple_repeat Simple_repeat 1 31 0 217 297 27 36 chr10 102803498 102803609 -42785679 - L2 LINE L2 -292 2980 2871 305 267 0 33 chr10 102803643 102803733 -42785555 - MIR SINE MIR 0 262 176 376 248 163 23 chr10 102803768 102803897 -42785391 - L2 LINE L2 -480 2834 2688 236 238 145 106 chr10 102804359 102804586 -42784702 + Charlie8 DNA MER1_type 92 1425 -992 2068 145 0 0 chr10 102805970 102806332 -42782956 + AluSx SINE Alu 1 362 0 277 330 27 87 chr10 102806360 102806545 -42782743 - L2 LINE L2 -1 3271 3098 571 294 47 43 chr10 102806828 102807039 -42782249 + MIR SINE MIR 12 223 -39 250 259 12 24 chr10 102807490 102807575 -42781713 + GA-rich Low_complexity Low_complexity 4 87 0 222 311 0 14 chr10 102808266 102808340 -42780948 - MIR SINE MIR 0 262 190 259 149 0 90 chr10 102808348 102808415 -42780873 + MER5A DNA MER1_type 9 69 -120 348 261 78 10 chr10 102809002 102809134 -42780154 - MIR SINE MIR -28 234 94 225 382 0 11 chr10 102809544 102809633 -42779655 - MIR SINE MIR -170 92 5 256 284 263 26 chr10 102810252 102810632 -42778656 - L2 LINE L2 -842 2472 2003 1184 214 33 4 chr10 102810758 102811034 -42778254 + L1P LINE L1 4896 5179 -967 581 266 60 52 chr10 102811337 102811585 -42777703 + MIR SINE MIR 5 254 -8 6071 210 78 2 chr10 102812085 102813585 -42775703 + L1MB7 LINE L1 3815 5437 -743 766 172 0 9 chr10 102813594 102813710 -42775578 + FLAM_C SINE Alu 4 118 -25 252 59 0 0 chr10 102813716 102813750 -42775538 + (TA)n Simple_repeat Simple_repeat 2 35 0 3678 144 29 29 chr10 102813750 102814451 -42774837 + L1MB7 LINE L1 5426 6126 -58 839 122 0 0 chr10 102814472 102814579 -42774709 - U6 snRNA snRNA 0 107 1 923 185 0 0 chr10 102814637 102814783 -42774505 - FRAM SINE Alu -30 146 1 2966 196 79 73 chr10 102814975 102815782 -42773506 - MER21B LTR ERV1 -51 812 1 479 281 14 41 chr10 102816391 102816584 -42772704 + MIR3 SINE MIR 2 192 -16 326 235 134 77 chr10 102816652 102816899 -42772389 + MIR SINE MIR 2 262 0 25 0 0 0 chr10 102816904 102816929 -42772359 + AT_rich Low_complexity Low_complexity 1 25 0 1105 52 0 0 chr10 102817679 102817815 -42771473 - AluSq SINE Alu -2 311 176 41038 43 9 9 chr10 102818456 102824312 -42764976 - L1PA4 LINE L1 -3 6152 297 611 121 0 0 chr10 102824312 102824395 -42764893 - L1PA4 LINE L1 -6063 83 1 2077 113 7 0 chr10 102824548 102824839 -42764449 - AluSx SINE Alu -19 293 1 270 0 0 0 chr10 102825413 102825443 -42763845 + (TG)n Simple_repeat Simple_repeat 2 31 0 503 307 72 19 chr10 102825473 102825709 -42763579 + MIR SINE MIR 5 250 -12 2009 104 54 4 chr10 102825837 102826115 -42763173 + AluSx SINE Alu 1 292 -20 358 294 44 44 chr10 102826159 102826339 -42762949 + L2 LINE L2 3108 3287 -26 2423 24 94 3 chr10 102826350 102826637 -42762651 - L1PA4 LINE L1 -3 6152 5840 1265 121 0 6 chr10 102826642 102826816 -42762472 - AluSq SINE Alu -140 173 1 21 0 0 0 chr10 102827825 102827846 -42761442 + AT_rich Low_complexity Low_complexity 1 21 0 215 146 24 0 chr10 102829775 102829816 -42759472 + (CCA)n Simple_repeat Simple_repeat 2 43 0 1603 181 13 13 chr10 102831374 102831673 -42757615 + AluJo SINE Alu 1 299 -13 676 308 51 14 chr10 102831840 102832054 -42757234 - MIR SINE MIR -39 223 2 237 271 0 73 chr10 102832058 102832154 -42757134 + MER5A DNA MER1_type 29 117 -72 186 277 170 43 chr10 102832922 102833016 -42756272 - MIR SINE MIR -40 222 117 4332 186 50 15 chr10 102833016 102833889 -42755399 + L1MC4a LINE L1 6905 7808 0 195 283 261 0 chr10 102833906 102833998 -42755290 - MIR SINE MIR -89 119 8 186 43 0 0 chr10 102834202 102834225 -42755063 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 4452 110 33 13 chr10 102834252 102834925 -42754363 - L1MA3 LINE L1 -1 6304 5619 1777 183 0 3 chr10 102834942 102835231 -42754057 + AluJb SINE Alu 1 288 -24 591 298 55 17 chr10 102837369 102837607 -42751681 - MIR SINE MIR -1 261 15 1354 183 30 0 chr10 102839052 102839282 -42750006 - MER58B DNA MER1_type 0 341 105 310 160 0 0 chr10 102839280 102839330 -42749958 - 5S rRNA rRNA -71 50 1 * 4909 105 28 9 chr10 102839332 102840016 -42749272 + L1PA16 LINE L1 5470 6166 0 752 143 61 0 chr10 102840022 102840169 -42749119 + L1MA7 LINE L1 6136 6291 0 332 192 0 26 chr10 102840169 102840247 -42749041 - MER58B DNA MER1_type -237 104 29 337 304 268 16 chr10 102840251 102840501 -42748787 - L3 LINE CR1 -44 1533 1221 1802 151 7 3 chr10 102840541 102840833 -42748455 - AluJb SINE Alu -19 293 1 290 245 0 0 chr10 102841496 102841549 -42747739 - MIR SINE MIR -1 261 209 1599 200 11 0 chr10 102841581 102841866 -42747422 - AluJo SINE Alu -24 288 1 1429 177 79 0 chr10 102841909 102842174 -42747114 - AluJb SINE Alu -26 286 1 428 288 92 12 chr10 102842191 102842354 -42746934 - MIR SINE MIR -77 185 10 221 372 61 25 chr10 102842417 102842613 -42746675 + L2 LINE L2 2447 2649 -665 211 128 59 20 chr10 102842851 102842953 -42746335 + (TA)n Simple_repeat Simple_repeat 1 106 0 343 231 94 34 chr10 102843013 102843130 -42746158 + MER103 DNA DNA 1 124 -42 225 0 0 0 chr10 102843169 102843194 -42746094 + (T)n Simple_repeat Simple_repeat 1 25 0 1933 135 7 4 chr10 102843288 102843599 -42745689 + AluSq SINE Alu 1 312 0 245 225 56 45 chr10 102844710 102844799 -42744489 - MER103 DNA DNA -49 117 28 308 24 24 0 chr10 102845006 102845047 -42744241 + (CA)n Simple_repeat Simple_repeat 1 42 0 228 286 0 0 chr10 102845057 102845113 -42744175 + MIR SINE MIR 58 113 -149 333 299 86 8 chr10 102845164 102845281 -42744007 + MIR SINE MIR 105 230 -32 832 336 132 24 chr10 102845361 102845915 -42743373 + L3 LINE CR1 337 950 -627 264 351 98 29 chr10 102846113 102846318 -42742970 + L3 LINE CR1 1324 1542 -35 324 285 120 55 chr10 102846483 102846683 -42742605 - MIR SINE MIR -5 257 45 1971 134 14 7 chr10 102846683 102846975 -42742313 - AluSq SINE Alu -16 297 4 241 324 38 9 chr10 102847228 102847333 -42741955 - L2 LINE L2 -3 3310 3203 350 328 36 31 chr10 102847366 102847561 -42741727 - L2 LINE L2 -283 3030 2835 2350 96 0 0 chr10 102847566 102847868 -42741420 + AluY SINE Alu 1 302 -9 1137 116 0 35 chr10 102847868 102848041 -42741247 + AluSg/x SINE Alu 134 300 -12 393 245 41 0 chr10 102848052 102848150 -42741138 + MER103 DNA DNA 65 166 0 559 217 7 51 chr10 102848551 102848689 -42740599 - MIR3 SINE MIR -46 162 31 345 313 102 24 chr10 102850013 102850179 -42739109 + MIR SINE MIR 34 212 -50 379 268 34 67 chr10 102851237 102851416 -42737872 - MER5A DNA MER1_type 0 189 17 338 198 47 12 chr10 102851474 102851560 -42737728 - MER5A DNA MER1_type -77 112 24 3477 248 87 19 chr10 102851560 102852485 -42736803 - L1MC4 LINE L1 -385 7657 6641 324 0 0 0 chr10 102852485 102852521 -42736767 + (CA)n Simple_repeat Simple_repeat 2 37 0 3477 248 87 19 chr10 102852521 102852714 -42736574 - L1MC4 LINE L1 -1401 6641 6463 1532 238 55 49 chr10 102853547 102854144 -42735144 + L2 LINE L2 2703 3311 -2 749 67 10 0 chr10 102855230 102855334 -42733954 + (TTCC)n Simple_repeat Simple_repeat 4 108 0 2169 118 0 3 chr10 102855341 102855637 -42733651 - AluSg1 SINE Alu -14 295 1 230 281 0 16 chr10 102855713 102855777 -42733511 + CT-rich Low_complexity Low_complexity 2 64 0 236 324 39 29 chr10 102856019 102856121 -42733167 - MIR SINE MIR -65 143 41 197 288 181 54 chr10 102856822 102857027 -42732261 + MIR SINE MIR 31 261 -1 2313 61 3 20 chr10 102858246 102858542 -42730746 + AluY SINE Alu 3 293 -18 235 143 71 129 chr10 102858686 102858756 -42730532 - MIR SINE MIR -78 184 119 4070 138 150 126 chr10 102858793 102859323 -42729965 - L1MC3 LINE L1 -26 7759 7243 304 321 0 30 chr10 102859323 102859454 -42729834 - MLT1F1 LTR MaLR -420 147 21 4070 138 150 126 chr10 102859454 102859982 -42729306 - L1MC3 LINE L1 -542 7243 6543 1532 215 105 69 chr10 102860638 102860952 -42728336 + L1ME1 LINE L1 5469 5770 -396 1950 137 10 20 chr10 102860952 102861258 -42728030 - AluJb SINE Alu -9 303 1 1532 215 105 69 chr10 102861258 102861588 -42727700 + L1ME1 LINE L1 5770 6166 0 182 339 54 0 chr10 102861675 102861731 -42727557 - MIR3 SINE MIR -137 71 13 2446 94 0 0 chr10 102862013 102862321 -42726967 - AluSx SINE Alu -4 308 1 4290 174 35 13 chr10 102862373 102863203 -42726085 + L1MB7 LINE L1 5328 6175 -9 743 188 39 0 chr10 102863389 102863517 -42725771 - AluJb SINE Alu -178 134 2 399 297 88 7 chr10 102863913 102864061 -42725227 - MIR SINE MIR -82 180 21 351 333 16 16 chr10 102864061 102864184 -42725104 - MIR3 SINE MIR -31 177 55 473 226 51 113 chr10 102866140 102866244 -42723044 + MIR SINE MIR 31 119 -143 1937 145 17 0 chr10 102866244 102866541 -42722747 - AluJb SINE Alu -10 302 1 473 226 51 113 chr10 102866541 102866631 -42722657 + MIR SINE MIR 119 213 -49 411 259 137 22 chr10 102866742 102866881 -42722407 - MIR SINE MIR -105 157 3 1251 194 104 49 chr10 102867378 102867724 -42721564 + MLT1A1 LTR MaLR 1 365 0 287 330 27 18 chr10 102867908 102868020 -42721268 - MER5B DNA MER1_type -25 153 41 2355 67 0 13 chr10 102868023 102868349 -42720939 + AluY SINE Alu 1 311 0 1501 207 3 38 chr10 102868359 102868678 -42720610 + AluJo SINE Alu 1 308 -4 209 233 0 0 chr10 102868806 102868849 -42720439 + T-rich Low_complexity Low_complexity 1 43 0 1952 152 10 13 chr10 102868992 102869302 -42719986 - AluSx SINE Alu -3 309 1 236 167 0 19 chr10 102869312 102869366 -42719922 + CT-rich Low_complexity Low_complexity 4 56 0 421 270 43 9 chr10 102870023 102870138 -42719150 - L2 LINE L2 -5 3308 3190 830 285 94 87 chr10 102870139 102870343 -42718945 + L2 LINE L2 2316 2517 -796 2598 153 39 5 chr10 102870343 102870755 -42718533 - MSTB LTR MaLR 0 426 1 830 285 94 87 chr10 102870755 102871058 -42718230 + L2 LINE L2 2517 2834 -479 2017 127 0 3 chr10 102871058 102871362 -42717926 - AluSq SINE Alu 0 303 1 830 285 94 87 chr10 102871362 102871561 -42717727 + L2 LINE L2 2834 3030 -283 241 324 38 9 chr10 102871593 102871698 -42717590 + L2 LINE L2 3203 3310 -3 1936 133 14 10 chr10 102871950 102872243 -42717045 + AluSq SINE Alu 4 297 -16 907 270 13 4 chr10 102872382 102872615 -42716673 - MLT1F LTR MaLR -307 235 1 586 261 147 64 chr10 102873170 102873353 -42715935 + L1ME4a LINE L1 5646 5813 -308 1906 127 7 7 chr10 102873353 102873629 -42715659 - AluSx SINE Alu -21 291 16 586 261 147 64 chr10 102873629 102873640 -42715648 + L1ME4a LINE L1 5813 5822 -299 1454 170 24 28 chr10 102873640 102873929 -42715359 - AluJo SINE Alu -24 288 1 586 261 147 64 chr10 102873929 102874170 -42715118 + L1ME4a LINE L1 5822 6118 -3 2435 115 3 35 chr10 102874639 102874987 -42714301 - MER1B DNA MER1_type 0 337 1 2383 78 0 3 chr10 102876726 102877020 -42712268 + AluSx SINE Alu 1 293 -19 577 266 78 26 chr10 102877688 102877880 -42711408 + MIR SINE MIR 47 248 -14 2325 78 7 7 chr10 102878260 102878554 -42710734 + AluSx SINE Alu 1 294 -18 235 143 71 129 chr10 102878698 102878768 -42710520 - MIR SINE MIR -78 184 119 4079 138 149 126 chr10 102878803 102879335 -42709953 - L1MC3 LINE L1 -24 7761 7243 292 328 0 30 chr10 102879335 102879466 -42709822 - MLT1F1 LTR MaLR -420 147 21 4079 138 149 126 chr10 102879466 102879994 -42709294 - L1MC3 LINE L1 -542 7243 6543 620 249 172 5 chr10 102880755 102880964 -42708324 - MIR SINE MIR -6 256 13 316 264 107 14 chr10 102881448 102881588 -42707700 - MIR3 SINE MIR -7 201 49 1764 104 165 0 chr10 102881626 102881886 -42707402 - AluSq SINE Alu 0 303 1 296 64 21 0 chr10 102883137 102883184 -42706104 + (CA)n Simple_repeat Simple_repeat 2 49 0 541 283 16 31 chr10 102883688 102883879 -42705409 - MIR SINE MIR -55 207 20 201 281 154 59 chr10 102885131 102885384 -42703904 - L2 LINE L2 -58 3214 2938 805 187 15 0 chr10 102885556 102885690 -42703598 + FRAM SINE Alu 5 140 -36 180 0 0 0 chr10 102885696 102885716 -42703572 + (TAAAA)n Simple_repeat Simple_repeat 3 22 0 740 206 91 23 chr10 102885769 102885944 -42703344 + MIR SINE MIR 21 207 -55 182 324 28 0 chr10 102886137 102886208 -42703080 + L2 LINE L2 3169 3241 -31 23 54 0 0 chr10 102886437 102886474 -42702814 + AT_rich Low_complexity Low_complexity 1 37 0 40 94 0 0 chr10 102886497 102886614 -42702674 + AT_rich Low_complexity Low_complexity 1 117 0 371 245 115 36 chr10 102886640 102886779 -42702509 + L2 LINE L2 3158 3307 -6 1074 294 88 21 chr10 102886802 102887176 -42702112 - MLT1K LTR MaLR 0 588 190 402 115 0 0 chr10 102887754 102887815 -42701473 + (CA)n Simple_repeat Simple_repeat 2 62 0 627 171 171 0 chr10 102887823 102887934 -42701354 + FLAM_A SINE Alu 1 130 -3 387 0 0 0 chr10 102887953 102887996 -42701292 + (TA)n Simple_repeat Simple_repeat 1 43 0 477 311 76 21 chr10 102888273 102888511 -42700777 - MIR SINE MIR -10 252 2 328 305 48 48 chr10 102888678 102888865 -42700423 - MER5A DNA MER1_type -2 187 1 256 267 17 0 chr10 102888876 102888936 -42700352 + (TG)n Simple_repeat Simple_repeat 1 61 0 2222 113 10 0 chr10 102889031 102889340 -42699948 + AluSp SINE Alu 1 312 -1 270 0 0 0 chr10 102889911 102889941 -42699347 + (TTCA)n Simple_repeat Simple_repeat 4 33 0 246 308 28 56 chr10 102891085 102891192 -42698096 - MER5A DNA MER1_type -85 104 1 913 136 0 0 chr10 102892691 102892823 -42696465 + AluJb SINE Alu 2 133 -179 182 316 237 0 chr10 102892863 102892977 -42696311 - MIR3 SINE MIR -7 201 61 666 285 109 5 chr10 102893467 102893688 -42695600 + MIR SINE MIR 15 258 -4 2207 116 34 65 chr10 102893741 102894128 -42695160 + THE1C LTR MaLR 1 375 0 310 269 7 13 chr10 102894805 102894953 -42694335 - MIR SINE MIR -8 254 28 2353 87 7 0 chr10 102896061 102896359 -42692929 + AluSg1 SINE Alu 1 300 -9 482 320 71 15 chr10 102896443 102896640 -42692648 - MIR SINE MIR -8 254 47 1985 147 0 22 chr10 102896848 102897162 -42692126 - AluSx SINE Alu -5 307 1 5055 159 81 23 chr10 102897162 102898164 -42691124 + L1MC3 LINE L1 6717 7776 -9 246 255 104 47 chr10 102898203 102898309 -42690979 - L1ME3A LINE L1 -97 6073 5962 541 231 142 0 chr10 102898434 102898603 -42690685 - L1ME3A LINE L1 -257 5913 5721 1531 154 9 0 chr10 102899256 102899489 -42689799 - AluJb SINE Alu -14 298 64 413 341 42 6 chr10 102899730 102899897 -42689391 + MIR SINE MIR 58 230 -32 1958 122 11 0 chr10 102900065 102900335 -42688953 - AluSx SINE Alu -39 273 1 1794 129 49 4 chr10 102902295 102902558 -42686730 + AluSx SINE Alu 1 275 -37 183 42 0 0 chr10 102902562 102902586 -42686702 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 334 258 11 11 chr10 102903976 102904065 -42685223 + Charlie2a DNA MER1_type 40 128 -2654 472 66 0 0 chr10 102904065 102904126 -42685162 + Alu SINE Alu 240 300 -11 385 248 301 31 chr10 102904157 102904195 -42685093 + Charlie2a DNA MER1_type 188 215 -2567 2148 125 3 0 chr10 102904195 102904499 -42684789 + AluSx SINE Alu 1 305 -7 385 248 301 31 chr10 102904499 102904686 -42684602 + Charlie2a DNA MER1_type 215 474 -2308 * 759 225 55 18 chr10 102904678 102904896 -42684392 + Charlie2a DNA MER1_type 727 952 -1910 247 330 93 50 chr10 102906739 102906997 -42682291 - L2 LINE L2 -177 3095 2827 2792 112 29 21 chr10 102907105 102907332 -42681956 - MSTB LTR MaLR -2 424 191 2056 144 0 3 chr10 102907332 102907630 -42681658 - AluJo SINE Alu -15 297 1 2792 112 29 21 chr10 102907630 102907823 -42681465 - MSTB LTR MaLR -235 191 1 604 180 87 76 chr10 102908532 102908704 -42680584 + MER5B DNA MER1_type 1 174 -4 1170 178 0 46 chr10 102909265 102909484 -42679804 - MER3 DNA MER1_type 0 209 1 333 0 0 0 chr10 102909854 102909891 -42679397 + (CA)n Simple_repeat Simple_repeat 1 37 0 * 732 86 0 0 chr10 102909890 102909995 -42679293 + (TC)n Simple_repeat Simple_repeat 1 105 0 258 273 87 20 chr10 102910018 102910168 -42679120 + FLAM_C SINE Alu 1 132 -1 180 152 0 0 chr10 102910312 102910345 -42678943 + CT-rich Low_complexity Low_complexity 2 34 0 1846 158 16 13 chr10 102910369 102910680 -42678608 + AluJb SINE Alu 1 312 0 397 222 0 11 chr10 102910808 102910898 -42678390 + L1MD3 LINE L1 7897 7985 -10 32 75 0 0 chr10 102911548 102911615 -42677673 + AT_rich Low_complexity Low_complexity 1 67 0 4833 38 2 7 chr10 102911702 102912255 -42677033 + L1PA5 LINE L1 5598 6147 -7 813 160 0 47 chr10 102912441 102912591 -42676697 - FLAM_C SINE Alu 0 143 1 2109 108 3 10 chr10 102913612 102913909 -42675379 - AluSc SINE Alu -14 295 1 2565 106 36 22 chr10 102914069 102914428 -42674860 - THE1B LTR MaLR 0 364 1 269 162 67 38 chr10 102914915 102915020 -42674268 + T-rich Low_complexity Low_complexity 1 108 0 831 167 0 0 chr10 102915030 102915156 -42674132 - FLAM_C SINE Alu -17 126 1 5053 132 14 13 chr10 102915156 102915924 -42673364 - L1MC2 LINE L1 -15 6329 5561 1151 189 47 10 chr10 102915924 102916176 -42673112 + L1MC/D LINE L1 5478 5731 -420 2223 130 0 0 chr10 102916320 102916628 -42672660 - AluSx SINE Alu -4 308 1 2587 34 0 3 chr10 102918064 102918360 -42670928 + AluY SINE Alu 1 295 -16 2285 90 7 3 chr10 102918689 102918990 -42670298 + AluSq SINE Alu 1 302 -11 2195 90 0 48 chr10 102919445 102919755 -42669533 + AluSx SINE Alu 1 295 -17 3267 166 13 32 chr10 102919899 102920376 -42668912 + L1MB5 LINE L1 5216 5679 -495 2057 110 3 13 chr10 102920376 102920509 -42668779 + AluSx SINE Alu 1 134 -178 2472 67 0 0 chr10 102920509 102920806 -42668482 + AluY SINE Alu 1 297 -14 2057 110 3 13 chr10 102920806 102920971 -42668317 + AluSx SINE Alu 134 296 -16 3267 166 13 32 chr10 102920971 102921158 -42668130 + L1MB5 LINE L1 5679 5868 -306 1012 178 0 12 chr10 102921158 102921321 -42667967 + FAM SINE Alu 8 168 -17 1334 168 7 100 chr10 102921321 102921623 -42667665 + L1MB5 LINE L1 5901 6174 0 686 167 0 19 chr10 102921679 102921787 -42667501 + AluSg/x SINE Alu 133 238 -72 551 112 56 0 chr10 102921950 102922039 -42667249 - L1MB5 LINE L1 0 6174 6081 2273 84 0 7 chr10 102922356 102922653 -42666635 + AluSc SINE Alu 1 295 -14 8525 68 11 27 chr10 102923116 102924301 -42664987 - Harlequin LTR ERV1 -5730 1166 1 2136 175 95 37 chr10 102924301 102924764 -42664524 - LTR2B LTR ERV1 0 490 1 1773 230 8 37 chr10 102924765 102925074 -42664214 - LTR49-int LTR ERV1 -3573 2758 2441 2149 119 0 16 chr10 102925074 102925386 -42663902 + AluY SINE Alu 1 307 -4 1773 230 8 37 chr10 102925386 102925708 -42663580 - LTR49-int LTR ERV1 -3890 2441 2068 1018 166 11 0 chr10 102925709 102925884 -42663404 + AluSc SINE Alu 119 295 -14 1401 224 69 72 chr10 102925884 102926494 -42662794 - LTR49-int LTR ERV1 -4268 2063 1372 555 141 0 10 chr10 102926616 102926715 -42662573 - LTR49-int LTR ERV1 -4951 1380 1283 355 301 0 0 chr10 102926715 102926788 -42662500 - tRNA-Glu-GAG tRNA tRNA 0 75 3 758 132 0 25 chr10 102926789 102926910 -42662378 - LTR49-int LTR ERV1 -5123 1208 1091 2169 138 0 0 chr10 102926921 102927232 -42662056 - AluSx SINE Alu -1 311 1 246 81 0 0 chr10 102927244 102927281 -42662007 + (TTC)n Simple_repeat Simple_repeat 3 39 0 2234 116 3 6 chr10 102927292 102927603 -42661685 - AluSx SINE Alu -2 310 1 1400 135 125 65 chr10 102927603 102927791 -42661497 - LTR49-int LTR ERV1 -3192 1688 1513 2230 130 0 0 chr10 102927791 102928099 -42661189 - AluSx SINE Alu -4 308 1 1400 135 125 65 chr10 102928099 102928234 -42661054 - LTR49-int LTR ERV1 -3367 1513 764 * 3256 128 59 36 chr10 102928223 102928779 -42660509 - LTR49-int LTR ERV1 -5762 569 1 1294 159 30 26 chr10 102928782 102929014 -42660274 - LTR49 LTR ERV1 -2 593 361 2157 198 54 106 chr10 102929070 102929328 -42659960 - L1MC4 LINE L1 -836 7206 6936 1863 152 10 16 chr10 102929328 102929631 -42659657 - AluJo SINE Alu -11 301 1 2157 198 54 106 chr10 102929631 102929797 -42659491 - L1MC4 LINE L1 -1106 6936 6763 760 233 0 0 chr10 102929797 102929930 -42659358 + FLAM_A SINE Alu 1 133 0 2157 198 54 106 chr10 102929930 102930029 -42659259 - L1MC4 LINE L1 -1279 6763 6660 1990 136 0 26 chr10 102930029 102930331 -42658957 + AluSx SINE Alu 1 294 -18 2157 198 54 106 chr10 102930331 102930532 -42658756 - L1MC4 LINE L1 -1382 6660 6518 380 282 109 52 chr10 102930579 102930827 -42658461 - L1ME LINE L1 -507 5614 5353 1433 117 34 0 chr10 102931022 102931227 -42658061 - AluSg/x SINE Alu 0 310 99 1854 155 3 17 chr10 102931241 102931538 -42657750 + AluJo SINE Alu 11 303 -9 832 225 61 25 chr10 102931552 102932001 -42657287 + MER4C LTR ERV1 149 465 0 244 284 101 34 chr10 102932168 102932316 -42656972 + L1ME LINE L1 5725 5885 -284 452 123 25 0 chr10 102932585 102932666 -42656622 + GA-rich Low_complexity Low_complexity 3 85 0 441 0 0 0 chr10 102932764 102932813 -42656475 + (CA)n Simple_repeat Simple_repeat 1 49 0 323 344 104 8 chr10 102933002 102933127 -42656161 + L2 LINE L2 3134 3270 -2 1006 155 0 0 chr10 102933404 102933559 -42655729 + FRAM SINE Alu 20 174 -2 382 250 50 0 chr10 102933698 102933798 -42655490 - MER112 DNA MER1_type 0 260 156 1102 138 0 0 chr10 102933981 102934140 -42655148 - AluSq SINE Alu -18 295 137 1947 158 0 0 chr10 102934360 102934522 -42654766 - AluSx SINE Alu -14 298 137 198 0 0 0 chr10 102934522 102934544 -42654744 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2245 89 0 3 chr10 102934544 102934826 -42654462 - AluSg SINE Alu -29 281 1 1947 158 0 0 chr10 102934826 102934960 -42654328 - AluSx SINE Alu -173 139 1 198 0 0 0 chr10 102935231 102935253 -42654035 + (TC)n Simple_repeat Simple_repeat 1 22 0 * 273 29 0 0 chr10 102935252 102935286 -42654002 + (CA)n Simple_repeat Simple_repeat 1 34 0 1870 87 0 16 chr10 102935686 102935975 -42653313 + AluY SINE Alu 35 319 0 2167 127 7 0 chr10 102936082 102936382 -42652906 - AluSq SINE Alu -11 302 1 2087 218 113 6 chr10 102936508 102937013 -42652275 + MLT1F1 LTR MaLR 3 561 -6 2295 59 10 26 chr10 102937231 102937537 -42651751 - AluY SINE Alu -10 301 1 216 0 0 0 chr10 102937820 102937844 -42651444 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1896 156 0 0 chr10 102937849 102938125 -42651163 - AluSx SINE Alu -36 276 1 1001 196 0 0 chr10 102938164 102938332 -42650956 + AluJb SINE Alu 132 299 -13 21 0 0 0 chr10 102938338 102938359 -42650929 + AT_rich Low_complexity Low_complexity 1 21 0 2038 183 28 34 chr10 102939084 102939549 -42649739 + MLT1C LTR MaLR 6 467 0 476 258 126 11 chr10 102939549 102939721 -42649567 - LTR16C LTR ERVL -36 455 262 2260 121 6 12 chr10 102939721 102940060 -42649228 + MER1B DNA MER1_type 1 337 0 923 209 263 22 chr10 102940123 102940530 -42648758 - MLT1D LTR MaLR 0 505 1 254 259 49 0 chr10 102940537 102940618 -42648670 - LTR16C LTR ERVL -261 230 146 2378 147 11 38 chr10 102940761 102941125 -42648163 + LTR42 LTR ERVL 18 369 -126 2450 73 7 0 chr10 102941125 102941428 -42647860 + AluSp SINE Alu 1 305 -8 2378 147 11 38 chr10 102941428 102941512 -42647776 + LTR42 LTR ERVL 369 454 -41 586 149 0 0 chr10 102941512 102941606 -42647682 - FRAM SINE Alu -16 160 67 272 217 0 0 chr10 102941607 102941653 -42647635 + LTR42 LTR ERVL 448 493 -2 30 0 0 0 chr10 102941708 102941738 -42647550 + AT_rich Low_complexity Low_complexity 1 30 0 264 30 0 0 chr10 102941971 102942004 -42647284 + (CA)n Simple_repeat Simple_repeat 2 34 0 959 167 12 0 chr10 102942067 102942229 -42647059 - FRAM SINE Alu -11 165 2 382 318 81 0 chr10 102942471 102942619 -42646669 + MER91B DNA MER1_type 26 185 -5 420 293 147 59 chr10 102942970 102943482 -42645806 - L2 LINE L2 -907 2407 1851 584 280 31 62 chr10 102943691 102943893 -42645395 + L3 LINE CR1 786 982 -595 1731 143 65 0 chr10 102943893 102944172 -42645116 + AluJo SINE Alu 2 298 -14 584 280 31 62 chr10 102944172 102944194 -42645094 + L3 LINE CR1 982 1003 -574 280 276 193 43 chr10 102944208 102944560 -42644728 - L2 LINE L2 -1469 1845 1441 2443 63 0 7 chr10 102945025 102945327 -42643961 + AluY SINE Alu 1 300 -11 2363 85 7 3 chr10 102945396 102945701 -42643587 - AluSx SINE Alu -6 306 1 32 0 0 0 chr10 102948205 102948237 -42641051 + AT_rich Low_complexity Low_complexity 1 32 0 812 219 6 0 chr10 102948237 102948401 -42640887 - AluJo SINE Alu -31 281 117 6277 92 27 16 chr10 102948402 102948899 -42640389 - L1MA3 LINE L1 -8 6297 5807 2203 106 0 0 chr10 102948899 102949211 -42640077 - AluSc SINE Alu 0 309 1 6277 92 27 16 chr10 102949211 102949701 -42639587 - L1MA3 LINE L1 -498 5807 5299 1957 119 0 77 chr10 102949777 102950104 -42639184 - AluSq SINE Alu -11 302 1 340 304 0 11 chr10 102950132 102950224 -42639064 + L2 LINE L2 3193 3283 -30 22 0 0 0 chr10 102950224 102950246 -42639042 + AT_rich Low_complexity Low_complexity 1 22 0 265 307 182 33 chr10 102950269 102950660 -42638628 - L2 LINE L2 -2154 1160 712 444 260 74 56 chr10 102950671 102950836 -42638452 + MER20B DNA MER1_type 31 199 -20 327 188 0 14 chr10 102950862 102950931 -42638357 + AluJ/FLAM SINE Alu 2 69 -233 237 219 146 0 chr10 102951421 102951517 -42637771 - MIR SINE MIR -33 229 120 236 163 0 82 chr10 102951747 102951796 -42637492 - L2 LINE L2 -18 3254 3210 334 289 28 44 chr10 102952392 102952572 -42636716 - L1ME3A LINE L1 -32 6138 5962 454 261 35 130 chr10 102953529 102953558 -42635730 + MIR SINE MIR 7 37 -225 2078 138 7 0 chr10 102953558 102953855 -42635433 + AluJb SINE Alu 1 299 -13 454 261 35 130 chr10 102953855 102954055 -42635233 + MIR SINE MIR 37 214 -48 254 368 62 14 chr10 102954398 102954542 -42634746 + MIR3 SINE MIR 5 155 -53 376 300 141 6 chr10 102954768 102954938 -42634350 + MIR SINE MIR 15 207 -55 265 311 149 8 chr10 102955148 102955306 -42633982 - MIR SINE MIR -57 205 22 2412 154 62 2 chr10 102955601 102956003 -42633285 + MSTB LTR MaLR 1 426 0 2188 116 0 0 chr10 102956414 102956707 -42632581 - AluSx SINE Alu -19 293 1 1032 257 22 0 chr10 102957035 102957257 -42632031 + MIR SINE MIR 15 241 -21 1569 190 14 14 chr10 102957419 102957709 -42631579 + AluJo SINE Alu 1 290 -22 750 128 138 112 chr10 102958162 102958466 -42630822 - MER33 DNA MER1_type -5 319 8 2171 117 0 28 chr10 102958500 102958817 -42630471 - AluSc SINE Alu 0 309 2 203 147 0 0 chr10 102958839 102958873 -42630415 + (TG)n Simple_repeat Simple_repeat 2 35 0 2463 83 0 6 chr10 102959189 102959502 -42629786 + AluY SINE Alu 1 311 0 947 189 42 37 chr10 102959625 102959842 -42629446 + MER20 DNA MER1_type 2 219 0 21 0 0 0 chr10 102960215 102960236 -42629052 + AT_rich Low_complexity Low_complexity 1 21 0 356 255 31 20 chr10 102960727 102960825 -42628463 - L2 LINE L2 -20 3293 3195 36 0 0 0 chr10 102960976 102961012 -42628276 + AT_rich Low_complexity Low_complexity 1 36 0 38 75 0 0 chr10 102961062 102961142 -42628146 + AT_rich Low_complexity Low_complexity 1 80 0 251 273 26 41 chr10 102961333 102961527 -42627761 - L1M4 LINE L1 -1500 4646 4456 587 144 133 0 chr10 102962226 102962355 -42626933 + MER5A DNA MER1_type 1 139 -39 207 0 0 0 chr10 102963253 102963276 -42626012 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 386 234 0 0 chr10 102963282 102963359 -42625929 + MIR SINE MIR 138 214 -48 196 305 146 44 chr10 102964958 102965184 -42624104 + L2 LINE L2 2008 2256 -1058 1019 193 107 7 chr10 102965349 102965639 -42623649 - MER33 DNA MER1_type -4 320 2 403 315 125 22 chr10 102965657 102965841 -42623447 + L3 LINE CR1 1318 1520 -57 767 168 23 0 chr10 102965853 102965984 -42623304 - AluJb SINE Alu -178 134 1 27 73 0 0 chr10 102966013 102966068 -42623220 + AT_rich Low_complexity Low_complexity 1 55 0 2044 141 3 0 chr10 102966147 102966444 -42622844 - AluSx SINE Alu -14 298 1 332 280 53 79 chr10 102966450 102966639 -42622649 - L1MC4a LINE L1 -1873 5935 5752 291 161 0 0 chr10 102966661 102966717 -42622571 + (TG)n Simple_repeat Simple_repeat 2 57 0 318 208 39 13 chr10 102966719 102966796 -42622492 - L1MC4a LINE L1 -493 5628 5550 312 305 53 7 chr10 102966934 102967075 -42622213 - MIR SINE MIR -61 201 46 29 70 0 0 chr10 102967579 102967636 -42621652 + AT_rich Low_complexity Low_complexity 1 57 0 518 205 43 0 chr10 102967640 102967757 -42621531 - L1ME1 LINE L1 -5 6161 6040 682 222 38 10 chr10 102967804 102968033 -42621255 - L1MA4 LINE L1 0 6300 6073 1820 156 0 36 chr10 102968059 102968246 -42621042 - AluJb SINE Alu -15 297 124 2602 47 0 0 chr10 102968246 102968547 -42620741 - AluY SINE Alu -10 301 1 1820 156 0 36 chr10 102968547 102968667 -42620621 - AluJb SINE Alu -188 124 1 670 266 89 0 chr10 102969922 102970125 -42619163 - MIR SINE MIR -5 257 37 303 231 148 0 chr10 102970153 102970261 -42619027 - L1ME1 LINE L1 -2067 5741 5618 285 237 21 32 chr10 102971711 102971804 -42617484 - L1MC5 LINE L1 -48 7913 7822 2434 87 0 0 chr10 102972161 102972460 -42616828 - AluSx SINE Alu -13 299 1 891 173 62 148 chr10 102972664 102972691 -42616597 - MLT1A1 LTR MaLR -38 327 299 2355 87 7 0 chr10 102972691 102972990 -42616298 + AluSq SINE Alu 1 301 -12 891 173 62 148 chr10 102972990 102973204 -42616084 - MLT1A1 LTR MaLR -66 299 124 916 59 52 22 chr10 102973204 102973339 -42615949 + MER85 DNA T2_type 1 139 0 891 173 62 148 chr10 102973339 102973454 -42615834 - MLT1A1 LTR MaLR -241 124 1 477 299 94 8 chr10 102973534 102973768 -42615520 + Charlie8 DNA MER1_type 1 254 -2163 423 38 0 0 chr10 102976790 102976843 -42612445 + (CA)n Simple_repeat Simple_repeat 2 54 0 217 313 24 24 chr10 102976874 102976957 -42612331 - L2 LINE L2 0 3272 3190 2212 106 10 7 chr10 102977170 102977472 -42611816 + AluSg SINE Alu 1 303 -7 1865 103 35 71 chr10 102978630 102978941 -42610347 - AluSq SINE Alu -13 300 1 2263 105 13 0 chr10 102979532 102979837 -42609451 - AluSc SINE Alu 0 309 1 1851 159 28 0 chr10 102980796 102981123 -42608165 + MER58B DNA MER1_type 6 341 0 1372 102 107 5 chr10 102981830 102982026 -42607262 - AluSx SINE Alu -96 216 1 2389 80 0 0 chr10 102982169 102982457 -42606831 - AluSc SINE Alu -21 288 1 2208 138 0 0 chr10 102982519 102982830 -42606458 + AluSx SINE Alu 1 311 -1 1006 162 0 12 chr10 102982832 102982999 -42606289 + AluJo/FRAM SINE Alu 136 300 -12 945 287 70 39 chr10 102983249 102983801 -42605487 - L2 LINE L2 -2 3311 2778 2531 75 0 0 chr10 102983801 102984106 -42605182 - AluSg SINE Alu -5 305 1 945 287 70 39 chr10 102984106 102984133 -42605155 - L2 LINE L2 -535 2778 2753 830 184 0 0 chr10 102984133 102984258 -42605030 + FLAM_A SINE Alu 1 125 -8 945 287 70 39 chr10 102984258 102984399 -42604889 - L2 LINE L2 -560 2753 2558 406 225 29 72 chr10 102984527 102984665 -42604623 - MIR SINE MIR -16 246 115 230 275 0 8 chr10 102986399 102986519 -42602769 + (TA)n Simple_repeat Simple_repeat 1 119 0 442 253 107 17 chr10 102987453 102987631 -42601657 + MER117 DNA MER1_type 4 197 0 2074 140 0 13 chr10 102988373 102988687 -42600601 - AluSx SINE Alu -2 310 1 2041 130 0 0 chr10 102989947 102990253 -42599035 - AluSx SINE Alu 0 306 1 2444 81 0 3 chr10 102990589 102990897 -42598391 - AluY SINE Alu -4 307 1 4116 98 22 2 chr10 102990900 102991480 -42597808 - Tigger1 DNA MER2_type -441 1977 1386 2154 74 28 3 chr10 102991478 102991762 -42597526 - Tigger1 DNA MER2_type -1166 1252 962 * 763 72 21 0 chr10 102991763 102991860 -42597428 + AluY SINE Alu 2 100 -211 1520 58 101 7 chr10 102992028 102992302 -42596986 - MER11A LTR ERVK -870 396 1 794 82 0 0 chr10 102992509 102992607 -42596681 + AluJ/FLAM SINE Alu 2 99 -213 279 320 72 39 chr10 102993959 102994112 -42595176 - Charlie2 DNA MER1_type -2622 160 3 276 292 22 0 chr10 102994256 102994345 -42594943 - Charlie8 DNA MER1_type -2324 93 3 1171 284 89 67 chr10 102994745 102995143 -42594145 - L3 LINE CR1 -200 1377 956 1929 156 3 0 chr10 102995143 102995438 -42593850 + AluJb SINE Alu 1 296 -16 1171 284 89 67 chr10 102995438 102995711 -42593577 - L3 LINE CR1 -621 956 691 245 362 21 0 chr10 102995861 102995955 -42593333 - MIR SINE MIR -68 140 45 241 321 19 57 chr10 102995993 102996099 -42593189 + MER5B DNA MER1_type 22 123 -55 293 411 18 31 chr10 102996224 102996550 -42592738 - L3 LINE CR1 -1189 388 67 1816 212 84 17 chr10 102997813 102998289 -42590999 + Charlie4a DNA MER1_type 1 508 0 180 248 20 20 chr10 102998371 102998524 -42590764 + (TA)n Simple_repeat Simple_repeat 1 153 0 203 177 63 76 chr10 103001164 103001243 -42588045 + MIR SINE MIR 62 139 -69 299 400 42 14 chr10 103004170 103004385 -42584903 - L2 LINE L2 -4 3268 3048 22 56 0 0 chr10 103004772 103004808 -42584480 + AT_rich Low_complexity Low_complexity 1 36 0 325 306 147 0 chr10 103004819 103004976 -42584312 - MIR SINE MIR -2 260 81 499 244 195 28 chr10 103005107 103005394 -42583894 - MLT1K LTR MaLR -162 426 92 217 292 69 14 chr10 103005488 103005560 -42583728 - MIR SINE MIR -179 83 8 758 169 8 32 chr10 103005939 103006063 -42583225 + FLAM_A SINE Alu 2 122 -11 21 0 0 0 chr10 103006063 103006084 -42583204 + AT_rich Low_complexity Low_complexity 1 21 0 21 100 0 0 chr10 103006121 103006191 -42583097 + AT_rich Low_complexity Low_complexity 1 70 0 238 291 82 9 chr10 103007110 103007220 -42582068 - MIR3 SINE MIR -85 123 6 1536 125 19 0 chr10 103007671 103007887 -42581401 - L1PB3 LINE L1 0 6154 5935 209 198 277 0 chr10 103007944 103008045 -42581243 + MIR3 SINE MIR 31 159 -49 6942 112 31 101 chr10 103009004 103009597 -42579691 - Tigger3b DNA MER2_type -1797 1231 779 1484 181 49 26 chr10 103009597 103009901 -42579387 - AluJo SINE Alu -1 311 1 6942 112 31 101 chr10 103009901 103010630 -42578658 - Tigger3b DNA MER2_type -2249 779 1 905 155 0 0 chr10 103010744 103010873 -42578415 - FLAM_A SINE Alu -3 130 2 355 309 58 47 chr10 103011066 103011257 -42578031 + MIR SINE MIR 39 231 -31 812 99 90 0 chr10 103011257 103011368 -42577920 + AluSx SINE Alu 51 171 -141 483 296 177 18 chr10 103011811 103011869 -42577419 - MIR SINE MIR 0 262 215 1532 121 67 9 chr10 103011869 103012092 -42577196 + MER46A DNA MER2_type 1 236 0 483 296 177 18 chr10 103012092 103012259 -42577029 - MIR SINE MIR -47 215 1 288 247 0 52 chr10 103012447 103012524 -42576764 - L2 LINE L2 0 3272 3200 336 300 121 0 chr10 103012585 103012725 -42576563 - MIR SINE MIR -78 184 28 2204 121 0 19 chr10 103013411 103013724 -42575564 + AluSx SINE Alu 1 307 -5 2640 140 15 0 chr10 103014053 103014452 -42574836 - Tigger1 DNA MER2_type 0 2418 2014 561 153 20 20 chr10 103014627 103014725 -42574563 - AluJ/FLAM SINE Alu -213 99 2 217 359 103 46 chr10 103015390 103015671 -42573617 - L3b LINE CR1 -1 1582 1286 535 294 31 6 chr10 103015800 103015963 -42573325 - MIR SINE MIR -12 250 84 307 264 0 55 chr10 103016363 103016454 -42572834 + MIR SINE MIR 177 262 0 226 231 0 0 chr10 103017154 103017193 -42572095 + L2 LINE L2 3222 3260 -12 220 172 0 47 chr10 103017305 103017319 -42571969 + (TAGA)n Simple_repeat Simple_repeat 2 15 -47 1641 151 73 15 chr10 103017319 103017591 -42571697 + AluSx SINE Alu 1 288 -24 220 172 0 47 chr10 103017591 103017603 -42571685 + (TAGA)n Simple_repeat Simple_repeat 15 26 -36 2199 129 3 0 chr10 103017603 103017906 -42571382 + AluSx SINE Alu 1 304 -8 220 172 0 47 chr10 103017906 103017942 -42571346 + (TAGA)n Simple_repeat Simple_repeat 26 62 0 1169 80 0 13 chr10 103018784 103018935 -42570353 + L1PA10 LINE L1 6015 6163 -5 677 277 68 9 chr10 103019150 103019370 -42569918 + MIR SINE MIR 5 237 -25 212 241 52 0 chr10 103019566 103019624 -42569664 - MIR3 SINE MIR -21 187 127 1508 138 0 4 chr10 103020281 103020506 -42568782 - MER2 DNA MER2_type -1 344 121 309 75 0 0 chr10 103020507 103020547 -42568741 + LTR23 LTR ERV1 320 359 -78 593 175 44 9 chr10 103020561 103020675 -42568613 - MER2 DNA MER2_type -210 135 18 342 283 97 0 chr10 103020775 103020888 -42568400 + L2 LINE L2 3187 3310 -3 1834 150 0 20 chr10 103021687 103021987 -42567301 + AluSx SINE Alu 1 294 -18 2311 92 3 3 chr10 103022518 103022810 -42566478 - AluSc SINE Alu -17 292 1 372 206 69 10 chr10 103023227 103023329 -42565959 + L1MC5 LINE L1 7808 7915 -46 307 259 245 14 chr10 103023754 103023901 -42565387 - MER5A DNA MER1_type -5 184 4 2207 127 61 0 chr10 103024036 103024382 -42564906 - MLT1B LTR MaLR -3 387 21 269 244 88 108 chr10 103024407 103024760 -42564528 - L1ME4a LINE L1 -28 6093 5748 560 267 106 6 chr10 103025380 103025560 -42563728 - MIR SINE MIR -39 223 26 1641 140 16 90 chr10 103025858 103026179 -42563109 - AluJb SINE Alu -15 297 1 218 228 18 18 chr10 103026181 103026238 -42563050 + MER5A DNA MER1_type 128 184 -5 1631 183 36 0 chr10 103026293 103026572 -42562716 + AluJo SINE Alu 1 289 -23 828 168 19 12 chr10 103026904 103027065 -42562223 + MER5B DNA MER1_type 11 172 -6 3240 205 91 9 chr10 103027319 103028002 -42561286 - MER21B LTR ERV1 -124 739 1 392 342 161 13 chr10 103028077 103028381 -42560907 + L2 LINE L2 2423 2771 -543 425 220 209 66 chr10 103028501 103028683 -42560605 - Charlie8 DNA MER1_type -2172 245 38 448 359 89 33 chr10 103028947 103029306 -42559982 + L2 LINE L2 2890 3268 -4 291 259 103 43 chr10 103030228 103030344 -42558944 - MER117 DNA MER1_type -70 127 5 2109 113 14 3 chr10 103030856 103031149 -42558139 + AluSc SINE Alu 1 296 -13 245 319 163 6 chr10 103031230 103031390 -42557898 + L3 LINE CR1 486 670 -907 2340 73 0 3 chr10 103032043 103032329 -42556959 + AluSx SINE Alu 19 303 -9 355 368 26 7 chr10 103032412 103032564 -42556724 - MIR SINE MIR -106 156 2 2226 115 0 13 chr10 103033507 103033812 -42555476 + AluSx SINE Alu 1 301 -11 244 200 0 0 chr10 103034415 103034455 -42554833 - L2 LINE L2 -22 3291 3252 264 236 255 11 chr10 103035014 103035128 -42554160 - MIR SINE MIR -65 143 3 2035 127 39 0 chr10 103035317 103035601 -42553687 + AluSg SINE Alu 1 295 -15 181 271 21 0 chr10 103035822 103035870 -42553418 + L2 LINE L2 3265 3313 0 1062 83 0 0 chr10 103036403 103036536 -42552752 - AluY SINE Alu -7 304 172 2178 119 14 0 chr10 103037979 103038274 -42551014 + AluSg SINE Alu 1 299 -11 949 146 24 18 chr10 103038825 103038989 -42550299 + FRAM SINE Alu 1 159 -17 1811 155 0 14 chr10 103038998 103039124 -42550164 + AluJb SINE Alu 10 136 -176 2370 96 0 0 chr10 103039124 103039427 -42549861 + AluSq SINE Alu 2 304 -9 1811 155 0 14 chr10 103039427 103039590 -42549698 + AluJb SINE Alu 136 295 -17 317 262 168 37 chr10 103039920 103040027 -42549261 + MIR SINE MIR 5 125 -137 282 204 247 21 chr10 103040029 103040122 -42549166 + MER63 DNA MER1_type 2 741 -95 211 256 244 23 chr10 103040190 103040276 -42549012 + MIR SINE MIR 137 241 -21 311 344 8 25 chr10 103040342 103040464 -42548824 + L2 LINE L2 3153 3272 0 249 333 13 13 chr10 103040474 103040549 -42548739 + L3 LINE CR1 1497 1571 -6 334 273 72 22 chr10 103040649 103040788 -42548500 + MIR SINE MIR 51 196 -66 224 216 78 0 chr10 103040820 103040871 -42548417 + MIR3 SINE MIR 131 185 -23 2347 92 13 3 chr10 103041937 103042242 -42547046 + AluSp SINE Alu 1 308 -5 201 308 0 46 chr10 103042276 103042341 -42546947 - MIR SINE MIR -58 150 89 22 0 0 0 chr10 103043481 103043503 -42545785 + AT_rich Low_complexity Low_complexity 1 22 0 621 220 8 8 chr10 103043511 103043629 -42545659 - FLAM_A SINE Alu -15 118 1 1096 94 0 0 chr10 103043664 103043802 -42545486 + AluSq/x SINE Alu 1 138 -174 1142 138 80 22 chr10 103043842 103044006 -42545282 - LTR49-int LTR ERV1 -1339 4456 4303 1626 189 3 26 chr10 103044006 103044312 -42544976 + AluJo SINE Alu 1 299 -13 1142 138 80 22 chr10 103044312 103044476 -42544812 - LTR49-int LTR ERV1 -1492 4303 3306 225 179 0 0 chr10 103044478 103044517 -42544771 - MER52A LTR ERV1 -1716 39 1 * 3046 165 261 51 chr10 103044517 103045133 -42544155 + MER52C LTR ERV1 25 508 -770 2241 119 0 0 chr10 103045133 103045427 -42543861 + AluSg SINE Alu 1 294 -16 3046 165 261 51 chr10 103045427 103045844 -42543444 + MER52C LTR ERV1 508 1278 0 2067 143 36 113 chr10 103045844 103046150 -42543138 - LTR49-int LTR ERV1 -2082 4249 3921 2320 111 0 7 chr10 103046150 103046457 -42542831 + AluSp SINE Alu 1 305 -8 2067 143 36 113 chr10 103046457 103046573 -42542715 - LTR49-int LTR ERV1 -2410 3921 3798 1939 176 0 19 chr10 103046573 103046891 -42542397 - AluJb SINE Alu 0 312 1 2067 143 36 113 chr10 103046891 103046973 -42542315 - LTR49-int LTR ERV1 -2533 3798 3711 1438 198 38 34 chr10 103046973 103047266 -42542022 - AluJb SINE Alu -18 294 1 2067 143 36 113 chr10 103047266 103047485 -42541803 - LTR49-int LTR ERV1 -2620 3711 3580 1924 177 79 26 chr10 103047478 103047970 -42541318 - LTR49-int LTR ERV1 -3056 3275 2758 * 1772 187 68 25 chr10 103047970 103048408 -42540880 - LTR2B LTR ERV1 0 490 34 40739 67 15 12 chr10 103048429 103052876 -42536412 - Harlequin LTR ERV1 0 6896 2427 2288 93 3 0 chr10 103052876 103053177 -42536111 - AluY SINE Alu -9 302 1 40739 67 15 12 chr10 103053177 103054446 -42534842 - Harlequin LTR ERV1 -4469 2427 1163 276 333 0 0 chr10 103054817 103054901 -42534387 + (CTGGGG)n Simple_repeat Simple_repeat 6 89 0 2417 93 0 6 chr10 103055585 103055898 -42533390 + AluSq SINE Alu 1 311 -2 2047 87 11 4 chr10 103056008 103056285 -42533003 + AluSq SINE Alu 22 300 -13 201 74 0 0 chr10 103056317 103056344 -42532944 + (TTC)n Simple_repeat Simple_repeat 2 28 0 2320 77 7 3 chr10 103057034 103057331 -42531957 - AluSq SINE Alu -15 298 1 201 370 82 0 chr10 103057677 103057750 -42531538 + L2 LINE L2 3141 3219 -53 332 242 183 25 chr10 103058027 103058147 -42531141 - MIR3 SINE MIR -59 149 11 2123 93 28 7 chr10 103058621 103058911 -42530377 + AluSx SINE Alu 1 296 -16 1077 141 0 13 chr10 103059040 103059196 -42530092 + FRAM SINE Alu 1 153 -23 1835 163 23 17 chr10 103060596 103060896 -42528392 - AluJb SINE Alu -10 302 1 791 166 43 16 chr10 103061020 103061207 -42528081 - L1MD3 LINE L1 0 7995 7804 834 160 0 0 chr10 103061631 103061762 -42527526 - FLAM_C SINE Alu -2 131 1 225 344 0 0 chr10 103061835 103061896 -42527392 - MIR SINE MIR -103 105 45 454 274 117 56 chr10 103061969 103062148 -42527140 + MIR3 SINE MIR 17 206 -2 683 164 37 52 chr10 103062664 103062798 -42526490 + AluJo SINE Alu 3 134 -178 1429 200 49 0 chr10 103062909 103063194 -42526094 + AluJo SINE Alu 1 299 -13 605 281 153 18 chr10 103063266 103063494 -42525794 + MIR SINE MIR 1 259 -3 386 235 182 71 chr10 103064084 103064254 -42525034 - MER5A DNA MER1_type 0 189 1 21 89 0 0 chr10 103064960 103065016 -42524272 + AT_rich Low_complexity Low_complexity 1 56 0 2008 104 4 4 chr10 103065822 103066102 -42523186 - AluSx SINE Alu -12 300 21 2224 53 7 50 chr10 103066674 103066976 -42522312 + AluY SINE Alu 1 289 -22 438 320 142 5 chr10 103067521 103067740 -42521548 - L3 LINE CR1 -86 1491 1243 203 219 206 14 chr10 103067786 103067859 -42521429 - L2 LINE L2 0 3313 3227 22 56 0 0 chr10 103068082 103068118 -42521170 + AT_rich Low_complexity Low_complexity 1 36 0 2275 68 3 23 chr10 103068967 103069276 -42520012 - AluY SINE Alu -8 303 1 193 411 41 0 chr10 103069276 103069349 -42519939 + L2 LINE L2 3133 3208 -64 1967 124 11 3 chr10 103069778 103070094 -42519194 - AluSx SINE Alu 0 318 1 2344 86 0 3 chr10 103070094 103070395 -42518893 - AluSc SINE Alu -9 300 1 229 167 0 0 chr10 103070979 103071015 -42518273 - Alu SINE Alu -135 168 133 2442 101 0 0 chr10 103071817 103072125 -42517163 + AluSx SINE Alu 1 308 -4 1487 142 5 5 chr10 103072218 103072436 -42516852 + AluJb SINE Alu 1 218 -94 826 144 8 0 chr10 103072448 103072580 -42516708 - MSTD LTR MaLR -261 135 3 403 319 29 14 chr10 103072582 103072861 -42516427 - L1ME3A LINE L1 -294 5876 5594 492 269 112 44 chr10 103072938 103073308 -42515980 - L1ME3A LINE L1 -661 5505 5127 610 299 65 25 chr10 103073367 103073730 -42515558 - L1ME3A LINE L1 -1088 5058 4653 2222 104 7 0 chr10 103073730 103074027 -42515261 - AluSc SINE Alu -10 299 1 610 299 65 25 chr10 103074027 103074307 -42514981 - L1ME3A LINE L1 -1493 4653 4386 25 51 0 0 chr10 103074364 103074403 -42514885 + AT_rich Low_complexity Low_complexity 1 39 0 1539 77 0 0 chr10 103074416 103074599 -42514689 - AluSc SINE Alu -126 183 1 2606 206 51 61 chr10 103074599 103074911 -42514377 - L1M4c LINE L1 -4728 1918 1605 2048 106 0 4 chr10 103074911 103075185 -42514103 - AluY SINE Alu -4 307 35 2606 206 51 61 chr10 103075185 103075979 -42513309 - L1M4c LINE L1 -5041 1605 817 2316 100 0 10 chr10 103076388 103076697 -42512591 - AluSx SINE Alu -6 306 1 451 230 14 0 chr10 103076777 103076916 -42512372 - L1M4 LINE L1 -960 5186 5046 478 270 49 18 chr10 103077219 103077382 -42511906 - LTR41 LTR ERVL -585 188 21 1774 169 10 25 chr10 103077754 103078068 -42511220 - AluJo SINE Alu -3 309 1 1915 108 0 0 chr10 103078491 103078741 -42510547 - AluSg SINE Alu -60 250 1 27 62 0 0 chr10 103078892 103078940 -42510348 + AT_rich Low_complexity Low_complexity 1 48 0 1010 76 0 0 chr10 103079179 103079311 -42509977 - L1PA8 LINE L1 -12 6160 6029 210 143 0 0 chr10 103079658 103079693 -42509595 + (TTC)n Simple_repeat Simple_repeat 2 36 0 697 199 0 23 chr10 103080907 103081038 -42508250 - FLAM_A SINE Alu -5 128 1 1495 244 39 12 chr10 103081108 103081481 -42507807 + MER119 DNA MER1_type 1 387 -196 2165 141 3 3 chr10 103081481 103081793 -42507495 + AluSx SINE Alu 1 312 0 1495 244 39 12 chr10 103081793 103081828 -42507460 + MER119 DNA MER1_type 387 420 -163 1944 176 0 13 chr10 103082284 103082596 -42506692 - AluJb SINE Alu -4 308 1 1789 160 28 3 chr10 103082726 103083008 -42506280 - AluJb SINE Alu -22 290 2 30 0 0 0 chr10 103083050 103083080 -42506208 + AT_rich Low_complexity Low_complexity 1 30 0 1886 153 0 7 chr10 103083745 103084039 -42505249 - AluJb SINE Alu -20 292 1 543 192 30 0 chr10 103084079 103084178 -42505110 - FLAM_A SINE Alu -28 114 13 2201 121 16 0 chr10 103085136 103085442 -42503846 + AluSx SINE Alu 1 311 -1 21 36 0 0 chr10 103086078 103086106 -42503182 + AT_rich Low_complexity Low_complexity 1 28 0 1589 166 22 7 chr10 103086927 103087204 -42502084 + AluSx SINE Alu 1 281 -31 2129 105 14 3 chr10 103087375 103087670 -42501618 + AluSg SINE Alu 1 298 -12 1691 203 27 29 chr10 103088004 103088379 -42500909 + MLT1A2 LTR MaLR 1 374 0 2256 185 72 0 chr10 103088381 103088840 -42500448 - L1MB5 LINE L1 -22 6152 5661 4298 175 41 54 chr10 103088847 103089997 -42499291 - L1MA6 LINE L1 0 6300 5163 2414 89 0 0 chr10 103090169 103090471 -42498817 - AluSc SINE Alu -7 302 1 1524 176 29 14 chr10 103090577 103090855 -42498433 - AluJo SINE Alu -30 282 1 963 198 21 5 chr10 103090921 103091113 -42498175 + AluJo SINE Alu 118 312 0 2503 72 0 0 chr10 103091326 103091630 -42497658 - AluSq SINE Alu -9 304 1 1831 151 62 0 chr10 103091865 103092189 -42497099 - MER2 DNA MER2_type 0 344 1 228 385 32 6 chr10 103092207 103092363 -42496925 - L2 LINE L2 -453 2861 2702 1760 184 148 6 chr10 103092723 103093088 -42496200 + MER54A LTR ERVL 485 901 0 393 177 0 171 chr10 103093237 103093395 -42495893 + L1ME1 LINE L1 6018 6148 -18 2327 236 75 43 chr10 103093645 103094544 -42494744 - L1M4 LINE L1 -1454 4692 3766 2199 103 0 7 chr10 103094549 103094850 -42494438 - AluSg1 SINE Alu -2 307 9 920 161 0 6 chr10 103094878 103095039 -42494249 - L1MB8 LINE L1 -2 6176 6017 2309 123 0 0 chr10 103095532 103095840 -42493448 + AluSx SINE Alu 1 308 -4 284 229 0 62 chr10 103096056 103096152 -42493136 + L1MC4 LINE L1 6614 6703 -1339 862 154 0 23 chr10 103096153 103096328 -42492960 + (TATG)n Simple_repeat Simple_repeat 4 174 0 243 0 0 0 chr10 103096328 103096355 -42492933 + (CA)n Simple_repeat Simple_repeat 2 28 0 2142 107 0 7 chr10 103096369 103096658 -42492630 - AluSc SINE Alu -20 289 3 2893 177 93 13 chr10 103096664 103097370 -42491918 + Charlie1 DNA MER1_type 1974 2736 -25 22 0 0 0 chr10 103097374 103097396 -42491892 + AT_rich Low_complexity Low_complexity 1 22 0 960 190 0 0 chr10 103097396 103097559 -42491729 + FRAM SINE Alu 1 163 -3 1535 252 98 17 chr10 103097605 103098380 -42490908 + L1MEc LINE L1 2063 2878 -3337 2399 153 42 33 chr10 103098380 103098804 -42490484 + MSTC LTR MaLR 1 428 0 1535 252 98 17 chr10 103098804 103098887 -42490401 + L1MEc LINE L1 2878 2953 -3262 731 233 42 82 chr10 103099001 103099130 -42490158 + L1MEc LINE L1 3491 3624 -2591 748 181 32 153 chr10 103099130 103099379 -42489909 + MER20 DNA MER1_type 1 219 0 731 233 42 82 chr10 103099379 103099605 -42489683 + L1MEc LINE L1 3624 3832 -2383 244 211 0 19 chr10 103099599 103099651 -42489637 + L1MC1 LINE L1 20 70 -6356 * 488 171 0 12 chr10 103099654 103099736 -42489552 + AluJ/FLAM SINE Alu 4 84 -228 7170 155 70 37 chr10 103099736 103101378 -42487910 + L1MC1 LINE L1 58 1845 -4581 1409 108 0 39 chr10 103101381 103101585 -42487703 - AluSx SINE Alu -9 303 108 4763 104 18 107 chr10 103101587 103103110 -42486178 + pTR5 LTR ERV1 742 2606 0 231 218 0 55 chr10 103103110 103103165 -42486123 - AluSx SINE Alu -195 108 57 2113 163 69 17 chr10 103103180 103103585 -42485703 - MSTC LTR MaLR -2 426 1 2321 151 73 21 chr10 103103585 103104062 -42485226 + L1MC1 LINE L1 1966 2467 -3959 922 214 0 0 chr10 103104063 103104236 -42485052 + FRAM SINE Alu 1 173 -3 293 230 0 14 chr10 103104238 103104312 -42484976 + L1MC1 LINE L1 2496 2568 -4039 1652 86 0 4 chr10 103104312 103104545 -42484743 + L1PA8 LINE L1 5932 6163 -9 11318 200 41 17 chr10 103104564 103105675 -42483613 + L1MC1 LINE L1 2513 3596 -3017 1655 132 44 94 chr10 103105675 103105994 -42483294 - AluSx SINE Alu -9 303 1 11318 200 41 17 chr10 103105994 103107132 -42482156 + L1MC1 LINE L1 3596 4705 -1908 2151 88 39 0 chr10 103107132 103107415 -42481873 + AluSp SINE Alu 2 295 -18 11318 200 41 17 chr10 103107415 103108012 -42481276 + L1MC1 LINE L1 4705 5286 -1327 1186 130 88 133 chr10 103108012 103108366 -42480922 - MER44D DNA MER2_type 0 609 2 11318 200 41 17 chr10 103108366 103109498 -42479790 + L1MC1 LINE L1 5286 6587 -26 267 202 0 0 chr10 103109516 103109600 -42479688 + (TA)n Simple_repeat Simple_repeat 2 85 0 248 350 10 0 chr10 103109600 103109697 -42479591 + L1M4 LINE L1 3751 3848 -2298 329 306 68 65 chr10 103109879 103110157 -42479131 + L1MCa LINE L1 796 1074 -5352 4375 101 7 26 chr10 103110312 103111002 -42478286 - L1MA5A LINE L1 -1 6296 5620 205 364 121 14 chr10 103111161 103111301 -42477987 + L2 LINE L2 2879 3033 -239 1836 149 7 10 chr10 103112862 103113150 -42476138 + AluJb SINE Alu 1 287 -25 305 91 0 0 chr10 103113385 103113429 -42475859 + AluSc SINE Alu 242 285 -14 2078 136 7 0 chr10 103113731 103114026 -42475262 + AluSq SINE Alu 1 297 -16 709 144 16 16 chr10 103114629 103114754 -42474534 - FLAM_A SINE Alu -8 125 1 1725 141 94 7 chr10 103114866 103115142 -42474146 + AluSx SINE Alu 2 301 -11 208 264 0 0 chr10 103115365 103115418 -42473870 + (TA)n Simple_repeat Simple_repeat 1 53 0 350 125 0 0 chr10 103116549 103116597 -42472691 - Alu SINE Alu -10 292 245 1771 216 17 5 chr10 103116717 103117120 -42472168 - L1MD3 LINE L1 -50 7945 7538 1009 222 163 38 chr10 103117120 103117277 -42472011 - Charlie1a DNA MER1_type -2187 574 438 2430 81 3 0 chr10 103117277 103117587 -42471701 - AluSp SINE Alu -2 311 1 1009 222 163 38 chr10 103117587 103117798 -42471490 - Charlie1a DNA MER1_type -2323 438 160 341 159 63 0 chr10 103117794 103117857 -42471431 - AluJo SINE Alu -9 293 227 * 405 216 0 0 chr10 103117865 103117939 -42471349 - AluJo SINE Alu -152 160 87 475 258 93 7 chr10 103117940 103118091 -42471197 - Charlie1a DNA MER1_type -1285 170 7 505 226 40 0 chr10 103118100 103118224 -42471064 - L1MEc LINE L1 -4334 2062 1934 1078 284 114 34 chr10 103118250 103118961 -42470327 - L1MEc LINE L1 -4516 1880 1113 255 234 0 0 chr10 103118985 103119049 -42470239 + L1MCa LINE L1 1259 1322 -5285 260 293 121 11 chr10 103119076 103119250 -42470038 + L1MEc LINE L1 620 812 -5584 352 281 85 101 chr10 103119254 103119495 -42469793 - L1MEc LINE L1 -5794 602 370 2139 135 0 3 chr10 103119495 103119799 -42469489 - AluSx SINE Alu -3 309 7 352 281 85 101 chr10 103119799 103120002 -42469286 - L1MEc LINE L1 -6026 370 165 257 272 87 11 chr10 103120281 103120373 -42468915 + MLT1K LTR MaLR 488 586 -2 1849 144 11 3 chr10 103120433 103120718 -42468570 - AluJb SINE Alu -25 287 1 240 86 0 0 chr10 103120743 103120778 -42468510 + (T)n Simple_repeat Simple_repeat 1 35 0 2166 123 0 7 chr10 103121049 103121351 -42467937 + AluSx SINE Alu 1 300 -12 274 333 108 17 chr10 103121468 103121588 -42467700 + L2 LINE L2 2728 2858 -456 288 189 40 14 chr10 103121956 103122030 -42467258 - L1MC5 LINE L1 -625 7336 7261 680 184 8 8 chr10 103122178 103122303 -42466985 + FLAM_C SINE Alu 1 125 -18 223 186 284 69 chr10 103122343 103122445 -42466843 + MIR SINE MIR 3 126 -136 27 49 0 0 chr10 103122646 103122687 -42466601 + AT_rich Low_complexity Low_complexity 1 41 0 2227 101 6 22 chr10 103123128 103123446 -42465842 + AluSq SINE Alu 1 313 0 732 344 113 31 chr10 103123665 103124284 -42465004 + L3 LINE CR1 81 750 -827 697 148 39 8 chr10 103124419 103124547 -42464741 - AluJb SINE Alu -180 132 1 21 36 0 0 chr10 103124870 103124898 -42464390 + AT_rich Low_complexity Low_complexity 1 28 0 499 165 122 17 chr10 103125012 103125127 -42464161 - FLAM_C SINE Alu -2 131 5 1978 157 0 22 chr10 103125649 103125968 -42463320 - AluSx SINE Alu 0 312 1 942 174 0 0 chr10 103126190 103126339 -42462949 - FRAM SINE Alu -30 146 1 188 274 59 0 chr10 103127424 103127475 -42461813 + L3 LINE CR1 1519 1572 -5 378 184 145 0 chr10 103127998 103128074 -42461214 + Charlie3 DNA MER1_type 1 87 -2623 1738 138 76 7 chr10 103128231 103128507 -42460781 + AluJo SINE Alu 1 295 -17 1142 133 6 12 chr10 103128659 103128832 -42460456 + AluSc SINE Alu 1 172 -137 915 104 8 0 chr10 103129073 103129198 -42460090 + AluSc SINE Alu 165 290 -19 335 311 68 11 chr10 103129301 103129478 -42459810 - LTR33A LTR ERVL -8 515 329 4134 167 21 0 chr10 103130206 103130877 -42458411 - ERVL LTR ERVL -3616 2148 1464 1470 143 14 0 chr10 103130877 103130928 -42458360 + AluJb SINE Alu 76 125 -187 207 69 0 0 chr10 103130928 103130957 -42458331 + (TA)n Simple_repeat Simple_repeat 2 30 0 1470 143 14 0 chr10 103130957 103131122 -42458166 + AluJb SINE Alu 125 295 -17 5502 119 48 13 chr10 103131122 103132027 -42457261 - Tigger1 DNA MER2_type -963 1455 520 1038 138 0 6 chr10 103132042 103132216 -42457072 - L1MA2 LINE L1 0 7723 7551 2332 101 3 38 chr10 103132236 103132603 -42456685 - L1PA14 LINE L1 -3 6158 5805 2086 126 19 16 chr10 103132605 103132689 -42456599 - L1MA2 LINE L1 -163 7560 7478 2181 119 3 0 chr10 103132689 103132982 -42456306 - AluSp SINE Alu -19 294 1 2086 126 19 16 chr10 103132982 103133262 -42456026 - L1MA2 LINE L1 -245 7478 7195 633 137 0 0 chr10 103133263 103133365 -42455923 - AluSg/x SINE Alu -3 307 206 13965 148 17 81 chr10 103133366 103134466 -42454822 - L1MA2 LINE L1 -520 7204 6035 2296 78 26 3 chr10 103134466 103134772 -42454516 - AluSp SINE Alu 0 313 1 13965 148 17 81 chr10 103134772 103136369 -42452919 - L1MA2 LINE L1 -1689 6035 4337 1083 188 5 0 chr10 103136369 103136561 -42452727 - AluJb SINE Alu 0 312 120 13965 148 17 81 chr10 103136561 103137921 -42451367 - L1MA2 LINE L1 -3387 4337 3250 1618 190 10 17 chr10 103137921 103138221 -42451067 - AluJo SINE Alu -4 308 11 13965 148 17 81 chr10 103138221 103138333 -42450955 - L1MA2 LINE L1 -4474 3250 3132 1816 121 0 8 chr10 103138336 103138584 -42450704 + AluSx SINE Alu 1 246 -66 2147 117 3 3 chr10 103138849 103139149 -42450139 - AluSx SINE Alu -12 300 1 5047 170 11 10 chr10 103139150 103140057 -42449231 - L1M1 LINE L1 -6641 924 17 2499 160 39 50 chr10 103140057 103140424 -42448864 - Tigger1 DNA MER2_type -1884 534 173 2072 136 0 23 chr10 103140424 103140734 -42448554 + AluSq SINE Alu 1 303 -10 2499 160 39 50 chr10 103140734 103140905 -42448383 - Tigger1 DNA MER2_type -2245 173 2 1651 266 162 11 chr10 103140914 103141705 -42447583 - L1MEc LINE L1 -5453 943 34 3397 177 40 3 chr10 103141966 103142594 -42446694 + Tigger7 DNA MER2_type 2 652 -81 883 114 0 0 chr10 103142624 103142756 -42446532 + Tigger7 DNA MER2_type 2455 2586 -1 1350 214 109 54 chr10 103142819 103143378 -42445910 + L1ME2 LINE L1 5569 6334 0 872 136 0 0 chr10 103143434 103143552 -42445736 + FLAM_C SINE Alu 1 118 -25 216 0 0 0 chr10 103143610 103143634 -42445654 + (CA)n Simple_repeat Simple_repeat 2 25 0 1245 162 31 14 chr10 103144004 103144226 -42445062 - AluJb SINE Alu 0 312 87 46 19 0 0 chr10 103144430 103144483 -42444805 + AT_rich Low_complexity Low_complexity 1 53 0 1975 146 3 3 chr10 103145007 103145302 -42443986 - AluJb SINE Alu -17 295 1 1712 159 3 55 chr10 103145306 103145486 -42443802 - AluJo SINE Alu -2 310 153 2227 118 0 0 chr10 103145486 103145782 -42443506 - AluSx SINE Alu -16 296 1 1712 159 3 55 chr10 103145782 103145928 -42443360 - AluJo SINE Alu -159 153 1 24 0 0 0 chr10 103145937 103145961 -42443327 + AT_rich Low_complexity Low_complexity 1 24 0 194 364 127 17 chr10 103146022 103146140 -42443148 + MIR SINE MIR 19 149 -59 2079 134 0 3 chr10 103146280 103146579 -42442709 + AluSg SINE Alu 1 298 -12 595 242 16 8 chr10 103147176 103147304 -42441984 + FLAM_A SINE Alu 2 130 -3 249 293 0 0 chr10 103147343 103147401 -42441887 + CT-rich Low_complexity Low_complexity 3 60 0 702 10 0 87 chr10 103147688 103147791 -42441497 - L1PA2 LINE L1 0 6155 6062 1641 56 0 37 chr10 103147974 103148190 -42441098 - AluY SINE Alu -8 303 96 2423 70 10 0 chr10 103148275 103148577 -42440711 - AluY SINE Alu -6 305 1 230 102 20 0 chr10 103148849 103148898 -42440390 - L1MA7 LINE L1 -5 6286 6237 2081 149 0 7 chr10 103148901 103149210 -42440078 - AluSx SINE Alu -1 311 5 1895 154 3 7 chr10 103149233 103149526 -42439762 - AluJb SINE Alu -18 294 3 2183 158 20 27 chr10 103149526 103149957 -42439331 - L1MA7 LINE L1 -44 6247 5818 560 312 37 23 chr10 103150059 103150277 -42439011 - MIR SINE MIR -13 249 29 2128 120 0 0 chr10 103151232 103151515 -42437773 + AluSx SINE Alu 1 283 -29 432 97 0 0 chr10 103151515 103151577 -42437711 + (TGAA)n Simple_repeat Simple_repeat 3 64 0 1934 109 64 3 chr10 103151625 103151908 -42437380 + AluSx SINE Alu 1 300 -12 2195 110 3 3 chr10 103152005 103152306 -42436982 - AluSx SINE Alu -11 301 1 942 189 0 6 chr10 103152332 103152491 -42436797 + FRAM SINE Alu 1 150 -26 2479 78 3 0 chr10 103152509 103152818 -42436470 + AluSp SINE Alu 1 310 -3 208 188 0 21 chr10 103152826 103152874 -42436414 + A-rich Low_complexity Low_complexity 1 47 0 1693 139 53 7 chr10 103152881 103153162 -42436126 + AluJo SINE Alu 1 294 -18 371 243 29 99 chr10 103153377 103153649 -42435639 - L1MC4a LINE L1 -112 6009 5755 323 271 35 53 chr10 103153798 103153968 -42435320 + L1MC/D LINE L1 5582 5748 -373 1926 130 3 3 chr10 103154066 103154383 -42434905 - AluSx SINE Alu 0 317 1 573 272 0 32 chr10 103155037 103155195 -42434093 + MIR SINE MIR 2 154 -108 1931 149 24 3 chr10 103155756 103156052 -42433236 + AluSx SINE Alu 2 303 -9 231 296 98 23 chr10 103156216 103156348 -42432940 + L1MC/D LINE L1 5775 5916 -1892 2360 88 0 7 chr10 103156500 103156797 -42432491 - AluSx SINE Alu -17 295 1 21 57 0 0 chr10 103156837 103156872 -42432416 + AT_rich Low_complexity Low_complexity 1 35 0 666 290 55 14 chr10 103157232 103157449 -42431839 - MIR SINE MIR -17 245 20 233 254 0 0 chr10 103157860 103157915 -42431373 - MIR SINE MIR -31 231 177 2003 123 27 3 chr10 103158163 103158456 -42430832 + AluSq SINE Alu 1 300 -13 301 303 7 14 chr10 103158579 103158721 -42430567 - L1M4 LINE L1 -4945 1597 1457 27 29 0 0 chr10 103158733 103158767 -42430521 + AT_rich Low_complexity Low_complexity 1 34 0 729 154 26 0 chr10 103158772 103158889 -42430399 - FLAM_C SINE Alu -23 120 1 412 238 27 53 chr10 103158894 103159116 -42430172 - L1ME LINE L1 -4683 2179 1667 27 29 0 0 chr10 103159142 103159176 -42430112 + AT_rich Low_complexity Low_complexity 1 34 0 273 303 56 62 chr10 103159201 103159558 -42429730 - L1ME LINE L1 -4955 1468 1114 2126 92 57 0 chr10 103159566 103159849 -42429439 - AluSx SINE Alu -11 301 3 701 167 0 76 chr10 103161124 103161268 -42428020 - FLAM_A SINE Alu 0 133 1 2155 136 7 0 chr10 103161550 103161852 -42427436 - AluSx SINE Alu -4 308 5 25 0 0 0 chr10 103161908 103161933 -42427355 + AT_rich Low_complexity Low_complexity 1 25 0 1065 275 149 28 chr10 103162195 103162832 -42426456 - HAL1 LINE L1 -1792 715 2 743 246 60 66 chr10 103162944 103163245 -42426043 - L2 LINE L2 -1 3312 3014 385 247 45 26 chr10 103163245 103163399 -42425889 - Charlie2a DNA MER1_type -5 2857 2701 2359 81 7 0 chr10 103163426 103163722 -42425566 + AluSq SINE Alu 2 299 -14 826 200 0 7 chr10 103163732 103163887 -42425401 + FRAM SINE Alu 1 154 -22 269 223 98 27 chr10 103163895 103164007 -42425281 - Charlie2a DNA MER1_type -200 2662 2543 1598 184 19 29 chr10 103164007 103164317 -42424971 - AluJb SINE Alu -5 307 1 353 303 40 6 chr10 103164323 103164498 -42424790 - L1MA8 LINE L1 -50 6241 6061 255 163 0 0 chr10 103164509 103164558 -42424730 + AluSp SINE Alu 121 169 -134 1487 170 62 4 chr10 103164567 103164826 -42424462 + AluJo SINE Alu 16 289 -23 3010 153 25 17 chr10 103164828 103165355 -42423933 - L1MA7 LINE L1 -233 6058 5524 2865 7 0 0 chr10 103165355 103165665 -42423623 - AluYa5 SINE Alu -1 310 1 3010 153 25 17 chr10 103165665 103165727 -42423561 - L1MA7 LINE L1 -767 5524 5464 2360 155 79 66 chr10 103165731 103165794 -42423494 - MER44D DNA MER2_type -1883 604 543 2433 83 0 3 chr10 103165794 103166107 -42423181 - AluSq SINE Alu -1 312 1 2360 155 79 66 chr10 103166107 103166585 -42422703 - MER44D DNA MER2_type -1944 543 1 490 211 108 0 chr10 103166587 103166791 -42422497 - Charlie2a DNA MER1_type -321 2541 2316 2367 30 7 14 chr10 103166875 103167171 -42422117 - L1PA5 LINE L1 0 6154 5861 562 233 13 13 chr10 103167183 103167342 -42421946 - Charlie2a DNA MER1_type -901 1961 1803 881 129 15 15 chr10 103167372 103167504 -42421784 - AluJb SINE Alu -180 132 1 28 29 0 0 chr10 103167514 103167549 -42421739 + AT_rich Low_complexity Low_complexity 1 35 0 2055 147 0 0 chr10 103167554 103167854 -42421434 + AluSx SINE Alu 1 300 -12 592 230 40 83 chr10 103167857 103168157 -42421131 - Charlie2a DNA MER1_type -1078 1784 1498 518 199 80 35 chr10 103168126 103168327 -42420961 - Charlie2a DNA MER1_type -1889 973 764 * 1991 111 0 4 chr10 103168329 103168599 -42420689 + AluSx SINE Alu 1 269 -43 1547 111 0 0 chr10 103168661 103168860 -42420428 - AluSg/x SINE Alu -1 309 111 775 253 52 0 chr10 103168866 103169099 -42420189 - L1MC4 LINE L1 -383 7659 7415 568 154 147 66 chr10 103169118 103169251 -42420037 + HsTC2 DNA Tc2 1617 1738 -160 2102 131 0 0 chr10 103169251 103169542 -42419746 + AluSq SINE Alu 1 291 -22 568 154 147 66 chr10 103169542 103169667 -42419621 + HsTC2 DNA Tc2 1738 1896 -2 396 134 0 0 chr10 103169800 103169867 -42419421 - MLT1D LTR MaLR 0 505 439 936 128 23 0 chr10 103169868 103170001 -42419287 + AluJb SINE Alu 1 136 -176 2071 180 52 23 chr10 103170019 103170457 -42418831 - MLT1D LTR MaLR -54 451 1 193 167 0 0 chr10 103170457 103170487 -42418801 - L2 LINE L2 -93 3220 3191 223 323 11 91 chr10 103170617 103170729 -42418559 - L2 LINE L2 -1391 1923 1830 2456 72 7 0 chr10 103170729 103171035 -42418253 + AluSp SINE Alu 1 308 -5 223 323 11 91 chr10 103171035 103171108 -42418180 - L2 LINE L2 -1484 1830 1753 2381 71 0 7 chr10 103171123 103171419 -42417869 - AluY SINE Alu -17 294 1 944 164 23 6 chr10 103171525 103171696 -42417592 + AluJb SINE Alu 139 312 0 1736 126 82 37 chr10 103173090 103173232 -42416056 + AluSx SINE Alu 1 135 -177 2175 102 38 3 chr10 103173232 103173525 -42415763 + AluSg SINE Alu 1 303 -7 1736 126 82 37 chr10 103173525 103173676 -42415612 + AluSx SINE Alu 135 307 -5 275 279 130 37 chr10 103173683 103173844 -42415444 + MIR SINE MIR 87 262 0 1881 153 7 20 chr10 103174139 103174434 -42414854 + AluJo SINE Alu 1 291 -21 936 255 122 17 chr10 103174572 103174866 -42414422 - MLT1J2 LTR MaLR -125 325 1 2119 95 32 0 chr10 103174921 103175204 -42414084 + AluSc SINE Alu 5 296 -13 1048 157 17 0 chr10 103175281 103175453 -42413835 - FRAM SINE Alu -6 170 1 344 358 0 9 chr10 103175453 103175562 -42413726 - MIR SINE MIR -135 127 20 199 333 40 10 chr10 103175629 103175728 -42413560 - MIR3 SINE MIR -19 189 88 21 71 0 0 chr10 103175746 103175788 -42413500 + AT_rich Low_complexity Low_complexity 1 42 0 1590 128 35 0 chr10 103175788 103176015 -42413273 + AluSx SINE Alu 1 235 -77 975 66 0 22 chr10 103176015 103176151 -42413137 + AluSg/x SINE Alu 178 310 0 6095 126 25 50 chr10 103176270 103176609 -42412679 - L1MA5A LINE L1 -2 6295 5949 1683 173 29 16 chr10 103176609 103176916 -42412372 + AluJo SINE Alu 1 311 -1 6095 126 25 50 chr10 103176916 103177541 -42411747 - L1MA5A LINE L1 -348 5949 5310 216 0 0 0 chr10 103177541 103177565 -42411723 + (TG)n Simple_repeat Simple_repeat 1 24 0 6095 126 25 50 chr10 103177565 103177581 -42411707 - L1MA5A LINE L1 -987 5310 5295 1895 121 15 0 chr10 103177581 103177846 -42411442 - AluSx SINE Alu -42 270 2 6095 126 25 50 chr10 103177846 103178803 -42410485 - L1MA5A LINE L1 -1002 5295 4382 2227 114 0 0 chr10 103179002 103179299 -42409989 + AluSx SINE Alu 5 301 -11 1824 148 20 10 chr10 103179468 103179765 -42409523 - AluJo SINE Alu -12 300 1 2212 97 10 0 chr10 103179795 103180085 -42409203 + AluSp SINE Alu 1 293 -20 1011 273 19 4 chr10 103180950 103181206 -42408082 - MIR SINE MIR 0 262 3 1760 91 0 0 chr10 103181313 103181534 -42407754 - AluSc SINE Alu -6 303 83 1239 59 0 0 chr10 103182098 103182321 -42406967 + (TTTTA)n Simple_repeat Simple_repeat 1 223 0 444 19 0 0 chr10 103182321 103182374 -42406914 + (TTATG)n Simple_repeat Simple_repeat 2 54 0 2178 80 0 0 chr10 103182374 103182638 -42406650 - AluY SINE Alu -47 264 1 2240 112 0 0 chr10 103182640 103182935 -42406353 - AluY SINE Alu -16 295 1 24 0 0 0 chr10 103187103 103187127 -42402161 + AT_rich Low_complexity Low_complexity 1 24 0 1741 168 31 14 chr10 103188040 103188332 -42400956 + AluJb SINE Alu 1 297 -15 2115 109 7 0 chr10 103188335 103188628 -42400660 + AluSx SINE Alu 1 295 -17 2238 106 3 0 chr10 103188743 103189036 -42400252 + AluSx SINE Alu 3 296 -16 495 325 186 23 chr10 103189039 103189531 -42399757 + L2 LINE L2 2708 3274 -39 580 275 151 19 chr10 103189677 103190032 -42399256 - L2 LINE L2 -1194 2120 1715 914 204 7 13 chr10 103190032 103190184 -42399104 + FRAM SINE Alu 1 151 -15 582 299 184 47 chr10 103190561 103190754 -42398534 + L2 LINE L2 2830 2995 -318 2253 82 4 0 chr10 103190754 103191034 -42398254 + AluSp SINE Alu 1 281 -32 288 0 0 0 chr10 103191035 103191067 -42398221 + (CA)n Simple_repeat Simple_repeat 1 32 0 582 299 184 47 chr10 103191067 103191273 -42398015 + L2 LINE L2 2994 3286 -27 1775 71 42 0 chr10 103191283 103191521 -42397767 - L1MA1 LINE L1 0 6302 6055 2323 125 13 48 chr10 103191864 103192241 -42397047 - THE1B LTR MaLR 0 364 1 2258 112 3 0 chr10 103192363 103192657 -42396631 - AluSc SINE Alu -14 295 1 1783 161 0 36 chr10 103192685 103192990 -42396298 + AluJo SINE Alu 4 297 -15 1614 98 26 57 chr10 103193109 103193257 -42396031 - LTR45 LTR ERV1 0 525 387 2604 40 10 3 chr10 103193257 103193559 -42395729 - AluY SINE Alu -7 304 1 1614 98 26 57 chr10 103193559 103193670 -42395618 - LTR45 LTR ERV1 -138 387 274 1566 168 112 35 chr10 103193670 103194009 -42395279 - LTR39 LTR ERV1 0 783 419 686 136 7 143 chr10 103194010 103194164 -42395124 + FLAM_A SINE Alu 1 133 -9 2087 119 116 0 chr10 103194164 103194500 -42394788 - LTR39 LTR ERV1 -358 425 51 1209 158 5 33 chr10 103194500 103194697 -42394591 - AluJb SINE Alu 0 312 120 1508 142 0 167 chr10 103194697 103195050 -42394238 + AluJb SINE Alu 1 294 -8 1209 158 5 33 chr10 103195050 103195067 -42394221 - AluJb SINE Alu -192 120 104 2172 92 7 0 chr10 103195068 103195360 -42393928 - AluSg SINE Alu -16 294 1 302 257 236 14 chr10 103197711 103197859 -42391429 - MIR SINE MIR -64 198 18 381 267 19 9 chr10 103197981 103198086 -42391202 - MIR SINE MIR -10 252 147 593 248 96 6 chr10 103198150 103198307 -42390981 - MIR SINE MIR -87 175 5 262 191 0 0 chr10 103198619 103198661 -42390627 + L2 LINE L2 3223 3264 -8 2377 92 0 0 chr10 103199170 103199462 -42389826 + AluSx SINE Alu 1 292 -20 27 29 0 0 chr10 103200309 103200343 -42388945 + AT_rich Low_complexity Low_complexity 1 34 0 2361 101 3 0 chr10 103200371 103200678 -42388610 - AluSp SINE Alu -5 308 1 2178 117 0 10 chr10 103200730 103201038 -42388250 - AluSg SINE Alu -5 305 1 1989 114 7 13 chr10 103201066 103201364 -42387924 + AluJb SINE Alu 1 296 -16 1989 119 10 7 chr10 103201748 103202041 -42387247 + AluSg1 SINE Alu 2 295 -14 2552 63 0 0 chr10 103202195 103202497 -42386791 - AluY SINE Alu -9 302 1 1331 194 57 25 chr10 103203148 103203427 -42385861 + AluJb SINE Alu 1 288 -24 2332 91 0 0 chr10 103203711 103204007 -42385281 - AluSx SINE Alu -16 296 1 2244 78 30 7 chr10 103204011 103204306 -42384982 - AluSp SINE Alu -11 302 1 1206 214 40 60 chr10 103204763 103205012 -42384276 - L1ME2 LINE L1 -9 6155 5903 4086 184 40 60 chr10 103205012 103205328 -42383960 + MER21B LTR ERV1 3 324 -539 1769 159 32 0 chr10 103205328 103205611 -42383677 + AluJo SINE Alu 1 292 -20 2144 132 0 0 chr10 103205613 103205917 -42383371 + AluSx SINE Alu 1 304 -8 4086 184 40 60 chr10 103205917 103206079 -42383209 + MER21B LTR ERV1 325 489 -374 204 40 0 0 chr10 103206079 103206104 -42383184 + (TTTC)n Simple_repeat Simple_repeat 2 26 0 1669 170 11 0 chr10 103206106 103206383 -42382905 - AluJo SINE Alu -30 282 3 4086 184 40 60 chr10 103206383 103206774 -42382514 + MER21B LTR ERV1 490 861 -2 1206 214 40 60 chr10 103206774 103206894 -42382394 - L1ME2 LINE L1 -261 5903 5793 605 247 25 22 chr10 103206905 103207143 -42382145 - L1MA10 LINE L1 -6 6319 5932 425 271 53 18 chr10 103207140 103207310 -42381978 - L1MEc LINE L1 -4704 1692 1517 * 502 274 149 16 chr10 103207387 103207642 -42381646 + L2 LINE L2 2911 3199 -114 1262 281 135 17 chr10 103207865 103208466 -42380822 - L1MEc LINE L1 -5688 708 37 189 262 64 71 chr10 103209006 103209061 -42380227 - MIR SINE MIR -13 249 195 2416 81 0 0 chr10 103209061 103209359 -42379929 - AluY SINE Alu -13 298 1 189 262 64 71 chr10 103209359 103209444 -42379844 - MIR SINE MIR -67 195 110 2285 212 53 63 chr10 103209457 103209891 -42379397 - MER82 DNA MER2_type -14 639 210 2221 106 0 0 chr10 103209891 103210202 -42379086 - AluSg SINE Alu 0 311 1 2285 212 53 63 chr10 103210202 103210402 -42378886 - MER82 DNA MER2_type -443 210 10 2065 116 0 0 chr10 103210486 103210763 -42378525 - AluSg1 SINE Alu -7 302 26 1792 161 0 7 chr10 103210872 103211152 -42378136 + AluSx SINE Alu 2 279 -33 219 36 0 0 chr10 103211155 103211183 -42378105 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 2345 109 0 0 chr10 103211232 103211544 -42377744 + AluSx SINE Alu 1 312 0 718 175 0 91 chr10 103211600 103211743 -42377545 - FLAM_C SINE Alu -3 130 1 1628 192 14 3 chr10 103211938 103212225 -42377063 - AluJo SINE Alu -22 290 1 1107 61 0 0 chr10 103212408 103212539 -42376749 - AluY SINE Alu -180 131 1 936 106 0 8 chr10 103212579 103212711 -42376577 + AluY SINE Alu 1 131 -180 1848 130 4 0 chr10 103212836 103213106 -42376182 + AluSq SINE Alu 28 298 -15 22 0 0 0 chr10 103213476 103213498 -42375790 + AT_rich Low_complexity Low_complexity 1 22 0 1921 126 21 0 chr10 103213792 103214078 -42375210 - AluSx SINE Alu -16 296 5 1859 176 3 13 chr10 103214165 103214477 -42374811 - AluJb SINE Alu -3 309 1 2191 125 3 0 chr10 103214486 103214797 -42374491 - AluSq SINE Alu -1 312 1 1633 138 78 11 chr10 103215299 103215582 -42373706 - AluSx SINE Alu -10 302 1 2167 110 7 0 chr10 103215742 103216034 -42373254 + AluSx SINE Alu 1 294 -18 2137 112 3 7 chr10 103216094 103216390 -42372898 + AluSp SINE Alu 1 295 -18 1573 172 54 4 chr10 103216588 103216867 -42372421 - AluJb SINE Alu -17 295 3 189 307 57 11 chr10 103217029 103217117 -42372171 - L2 LINE L2 -284 2988 2897 196 290 58 29 chr10 103217192 103217261 -42372027 - L2 LINE L2 -515 2799 2729 1885 140 13 29 chr10 103217327 103217642 -42371646 - AluSx SINE Alu -2 310 1 2294 84 10 19 chr10 103217972 103218283 -42371005 - AluSp SINE Alu -5 308 1 1543 189 4 14 chr10 103218311 103218592 -42370696 + AluJb SINE Alu 1 278 -34 2395 89 0 0 chr10 103218593 103218895 -42370393 - AluSc SINE Alu -7 302 1 310 227 184 7 chr10 103219332 103219473 -42369815 - L1ME4a LINE L1 -3 6118 5953 2254 102 7 0 chr10 103219533 103219827 -42369461 - AluSp SINE Alu -17 296 1 2187 119 0 3 chr10 103219874 103220169 -42369119 - AluSg SINE Alu -16 294 1 734 235 12 30 chr10 103220263 103220429 -42368859 - FAM SINE Alu -16 169 7 624 214 121 47 chr10 103220461 103220718 -42368570 - L1MC5 LINE L1 -385 7576 7301 1298 174 5 0 chr10 103220719 103220943 -42368345 - AluJb SINE Alu -1 311 87 821 171 33 108 chr10 103221522 103221762 -42367526 - MER58A DNA MER1_type 0 224 3 520 238 89 36 chr10 103222949 103223117 -42366171 - L1ME2 LINE L1 -16 6148 5972 1754 244 65 22 chr10 103223149 103223640 -42365648 - L1ME2 LINE L1 -283 5881 5363 2247 115 0 3 chr10 103223640 103223945 -42365343 - AluSc SINE Alu -5 304 1 1754 244 65 22 chr10 103223945 103223993 -42365295 - L1ME2 LINE L1 -801 5363 5319 1502 144 43 29 chr10 103224135 103224443 -42364845 - AluJb SINE Alu 0 312 8 226 143 0 0 chr10 103225715 103225750 -42363538 - U2 snRNA snRNA -152 36 2 1792 176 17 0 chr10 103225786 103226081 -42363207 - AluSx SINE Alu -7 305 6 203 79 26 0 chr10 103226161 103226199 -42363089 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 1212 122 6 0 chr10 103226236 103226408 -42362880 - AluY SINE Alu -138 173 1 414 39 0 0 chr10 103226453 103226505 -42362783 + (TG)n Simple_repeat Simple_repeat 1 52 0 2150 86 4 4 chr10 103226505 103226785 -42362503 - AluSp SINE Alu -33 280 1 1496 174 3 117 chr10 103226805 103227139 -42362149 - AluJb SINE Alu -6 296 1 30 27 0 0 chr10 103227227 103227264 -42362024 + AT_rich Low_complexity Low_complexity 1 37 0 1453 161 84 42 chr10 103228332 103228467 -42360821 + AluSx SINE Alu 1 129 -183 2830 9 0 9 chr10 103228467 103228785 -42360503 + AluYb8 SINE Alu 1 315 -3 1453 161 84 42 chr10 103228785 103228934 -42360354 + AluSx SINE Alu 129 297 -15 3173 119 36 88 chr10 103228941 103229102 -42360186 - MER1A DNA MER1_type -2173 527 359 1527 139 64 43 chr10 103229102 103229382 -42359906 + AluSx SINE Alu 1 286 -26 3173 119 36 88 chr10 103229382 103229776 -42359512 - MER1A DNA MER1_type -2341 359 1 2067 89 0 4 chr10 103229882 103230152 -42359136 - AluY SINE Alu -6 305 37 1437 181 132 4 chr10 103230229 103230495 -42358793 - AluJo SINE Alu -2 300 1 281 253 101 62 chr10 103230729 103230805 -42358483 - L1MEd LINE L1 -5933 186 114 414 0 0 0 chr10 103230805 103230851 -42358437 + (TA)n Simple_repeat Simple_repeat 1 46 0 207 0 0 0 chr10 103230850 103230873 -42358415 + (CA)n Simple_repeat Simple_repeat 2 24 0 * 281 253 101 62 chr10 103230851 103230873 -42358415 - L1MEd LINE L1 -6005 114 94 2358 74 17 0 chr10 103230873 103231169 -42358119 - AluSx SINE Alu -11 301 1 281 253 101 62 chr10 103231169 103231269 -42358019 - L1MEd LINE L1 -6025 94 2 23 33 0 0 chr10 103231455 103231485 -42357803 + AT_rich Low_complexity Low_complexity 1 30 0 283 179 0 45 chr10 103231868 103231935 -42357353 + L1M4 LINE L1 3890 3953 -2193 212 297 107 59 chr10 103232509 103232646 -42356642 - MIR3 SINE MIR -32 176 43 186 309 25 25 chr10 103233773 103233854 -42355434 - MIR3 SINE MIR -9 199 119 367 240 198 53 chr10 103234523 103234806 -42354482 - L1ME LINE L1 -302 5819 5496 36 0 0 0 chr10 103235884 103235920 -42353368 + AT_rich Low_complexity Low_complexity 1 36 0 183 114 0 0 chr10 103236037 103236072 -42353216 + (T)n Simple_repeat Simple_repeat 1 35 0 2094 88 67 17 chr10 103236074 103236371 -42352917 - AluSx SINE Alu 0 312 1 881 178 0 94 chr10 103236377 103236568 -42352720 - FRAM SINE Alu -12 164 1 2440 78 0 3 chr10 103236800 103237108 -42352180 - AluY SINE Alu -4 307 1 1909 135 14 10 chr10 103237393 103237682 -42351606 - AluSx SINE Alu -22 290 1 29 0 0 0 chr10 103237921 103237950 -42351338 + AT_rich Low_complexity Low_complexity 1 29 0 1324 93 33 133 chr10 103237951 103238133 -42351155 - L1MA2 LINE L1 0 6304 6162 2076 128 4 0 chr10 103238133 103238414 -42350874 - AluSx SINE Alu -30 282 1 1324 93 33 133 chr10 103238414 103238531 -42350757 - L1MA2 LINE L1 -142 6162 6035 28 48 0 0 chr10 103238527 103238569 -42350719 + AT_rich Low_complexity Low_complexity 1 42 0 * 555 176 0 10 chr10 103239125 103239227 -42350061 - AluJo SINE Alu -6 306 206 * 842 163 0 27 chr10 103239221 103239368 -42349920 - AluJo SINE Alu -169 143 2 2364 88 3 7 chr10 103239552 103239859 -42349429 + AluSp SINE Alu 1 306 -7 518 180 90 0 chr10 103240006 103240117 -42349171 + MER46A DNA MER2_type 26 146 -90 2441 72 0 3 chr10 103240368 103240674 -42348614 - AluY SINE Alu -6 305 1 25 0 0 0 chr10 103240683 103240708 -42348580 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr10 103241532 103241560 -42347728 + AT_rich Low_complexity Low_complexity 1 28 0 820 141 22 22 chr10 103241686 103241821 -42347467 - AluJo SINE Alu -177 135 1 1015 204 9 44 chr10 103242168 103242394 -42346894 - MER20 DNA MER1_type -1 218 1 448 204 85 39 chr10 103243714 103243894 -42345394 - L1ME2 LINE L1 0 6166 5985 2189 112 7 0 chr10 103244353 103244648 -42344640 - AluSx SINE Alu -15 297 1 353 130 0 0 chr10 103244660 103244729 -42344559 - AluSp/q SINE Alu 0 303 235 266 100 11 0 chr10 103244717 103244772 -42344516 - Alu SINE Alu -261 39 1 * 1150 204 69 24 chr10 103244877 103245166 -42344122 - AluJb SINE Alu 0 302 1 2207 107 0 0 chr10 103245635 103245926 -42343362 + AluSg SINE Alu 1 291 -19 625 224 16 0 chr10 103246683 103246808 -42342480 - FLAM_C SINE Alu -6 127 1 617 215 21 86 chr10 103246883 103247116 -42342172 - L1ME2 LINE L1 -10 6154 5937 718 253 149 6 chr10 103247148 103247509 -42341779 - L1ME2 LINE L1 -311 5855 5423 1990 136 0 0 chr10 103248211 103248520 -42340768 - AluSx SINE Alu 0 309 1 305 280 119 8 chr10 103248532 103248650 -42340638 - L1MC4a LINE L1 -659 7149 7019 665 232 120 12 chr10 103248755 103248996 -42340292 - MER63B DNA MER1_type -126 310 44 743 223 19 6 chr10 103249004 103249161 -42340127 - AluJo SINE Alu -35 277 119 21 0 0 0 chr10 103249294 103249315 -42339973 + AT_rich Low_complexity Low_complexity 1 21 0 1345 225 160 8 chr10 103249315 103249839 -42339449 - L1ME2 LINE L1 -900 5246 4643 1537 187 4 15 chr10 103250046 103250319 -42338969 - AluJb SINE Alu -17 295 26 748 283 111 73 chr10 103250464 103250696 -42338592 + L1M4 LINE L1 4384 4606 -1540 2039 130 3 10 chr10 103250696 103250997 -42338291 + AluSx SINE Alu 1 299 -13 748 283 111 73 chr10 103250997 103251656 -42337632 + L1M4 LINE L1 4606 5309 -837 386 76 30 0 chr10 103253389 103253455 -42335833 - L1PB2 LINE L1 -2 6149 6082 558 274 223 27 chr10 103253540 103253836 -42335452 + L2 LINE L2 1190 1543 -1771 1473 263 229 16 chr10 103253886 103254506 -42334782 + L2 LINE L2 1765 2252 -1062 2113 117 19 13 chr10 103254506 103254813 -42334475 - AluSg SINE Alu -1 309 1 1847 156 24 0 chr10 103254813 103255107 -42334181 - AluSx SINE Alu -10 302 1 1473 263 229 16 chr10 103255107 103255158 -42334130 + L2 LINE L2 2251 2580 -734 834 271 86 85 chr10 103255339 103255773 -42333515 - HAL1 LINE L1 -301 2206 1774 2291 108 0 0 chr10 103255773 103256070 -42333218 - AluSq SINE Alu -16 297 1 834 271 86 85 chr10 103256070 103256331 -42332957 - HAL1 LINE L1 -733 1774 1507 1646 160 52 3 chr10 103256331 103256619 -42332669 - AluJb SINE Alu -10 302 1 834 271 86 85 chr10 103256619 103256757 -42332531 - HAL1 LINE L1 -1000 1507 1371 388 288 40 0 chr10 103256762 103256887 -42332401 - FLAM_A SINE Alu 0 133 4 1144 231 20 48 chr10 103257035 103257329 -42331959 - AluJo SINE Alu -18 294 9 340 304 127 42 chr10 103257424 103257826 -42331462 - HAL1 LINE L1 -1618 889 454 266 256 12 24 chr10 103257973 103258055 -42331233 - HAL1 LINE L1 -2309 198 118 2082 114 10 10 chr10 103258407 103258705 -42330583 - AluSx SINE Alu -7 305 8 840 181 120 114 chr10 103259324 103259623 -42329665 - AluJo SINE Alu -1 301 1 2371 104 3 0 chr10 103259699 103260008 -42329280 - AluSp SINE Alu -1 312 3 521 172 224 45 chr10 103261001 103261135 -42328153 + AluSc SINE Alu 135 292 -17 359 304 129 45 chr10 103261213 103261278 -42328010 + HAL1 LINE L1 1429 1487 -1020 2047 123 7 13 chr10 103261278 103261578 -42327710 - AluSq SINE Alu -15 298 1 359 304 129 45 chr10 103261578 103261736 -42327552 + HAL1 LINE L1 1487 1671 -836 25 31 0 0 chr10 103262106 103262138 -42327150 + AT_rich Low_complexity Low_complexity 1 32 0 184 279 192 29 chr10 103262513 103262617 -42326671 + MIR SINE MIR 26 146 -62 286 175 124 82 chr10 103262843 103262940 -42326348 + MIR SINE MIR 124 224 -38 689 183 98 6 chr10 103263071 103263235 -42326053 + Charlie1 DNA MER1_type 40 218 -2543 313 224 153 0 chr10 103263229 103263327 -42325961 + Charlie1 DNA MER1_type 2619 2731 -30 * 1783 147 31 11 chr10 103263331 103263617 -42325671 + AluSx SINE Alu 1 292 -20 267 241 36 36 chr10 103263835 103263918 -42325370 - L1ME LINE L1 -547 5508 5426 368 301 140 16 chr10 103263929 103264122 -42325166 - L1ME LINE L1 -2808 3272 3056 475 280 67 16 chr10 103264187 103264559 -42324729 - L1ME LINE L1 -3111 2969 2579 266 333 14 27 chr10 103265123 103265270 -42324018 - L1ME1 LINE L1 -72 6094 5950 730 195 107 0 chr10 103265281 103265450 -42323838 + MER20 DNA MER1_type 1 187 -32 329 217 14 0 chr10 103265461 103265530 -42323758 - MLT1E LTR MaLR -523 70 1 252 312 56 8 chr10 103265708 103265833 -42323455 - L1ME LINE L1 -5145 925 795 2267 80 10 3 chr10 103265946 103266246 -42323042 - AluY SINE Alu -9 302 1 186 133 0 0 chr10 103266680 103266710 -42322578 + (CA)n Simple_repeat Simple_repeat 2 31 0 422 333 110 13 chr10 103266718 103267036 -42322252 - L1M4 LINE L1 -3528 2618 2270 2050 126 0 20 chr10 103267304 103267433 -42321855 + AluSx SINE Alu 10 140 -172 2132 122 24 0 chr10 103267433 103267727 -42321561 + AluSx SINE Alu 3 303 -9 2050 126 0 20 chr10 103267727 103267891 -42321397 + AluSx SINE Alu 140 297 -15 695 131 146 0 chr10 103267941 103268071 -42321217 + MER50-int LTR ERV1 10 158 -7047 1315 162 32 4 chr10 103268078 103268331 -42320957 - MER50 LTR ERV1 -23 711 452 1579 151 74 0 chr10 103268352 103268637 -42320651 - MER50 LTR ERV1 -428 306 1 1137 172 10 34 chr10 103269149 103269401 -42319887 - AluJo SINE Alu 0 333 87 849 176 85 21 chr10 103269560 103269748 -42319540 + MER34C LTR ERV1 6 205 -380 2346 133 25 0 chr10 103269748 103270147 -42319141 - MER84 LTR ERVI 0 507 99 9130 64 1 6 chr10 103270169 103272127 -42317161 - L1PA7 LINE L1 -9 6145 4177 5070 97 5 0 chr10 103272127 103272870 -42316418 + L1PA7 LINE L1 3434 4180 -1966 1167 151 61 5 chr10 103272873 103273085 -42316203 + MER30 DNA MER1_type 7 230 0 4308 92 19 47 chr10 103273093 103273776 -42315512 - MER4A LTR ERV1 0 664 1 616 101 20 10 chr10 103273776 103273875 -42315413 - MER84 LTR ERVI -407 100 1 694 204 303 14 chr10 103273875 103274169 -42315119 + MER34C LTR ERV1 201 579 -6 759 271 121 55 chr10 103274340 103274484 -42314804 + MER77 LTR ERV1 53 186 -419 1631 188 0 24 chr10 103274484 103274782 -42314506 + AluJo SINE Alu 1 291 -21 759 271 121 55 chr10 103274782 103275021 -42314267 + MER77 LTR ERV1 186 481 -124 4620 143 56 9 chr10 103275021 103275809 -42313479 + LTR1B LTR ERV1 2 826 0 759 271 121 55 chr10 103275809 103275936 -42313352 + MER77 LTR ERV1 481 598 -7 823 169 88 0 chr10 103276383 103276539 -42312749 - AluJo/FRAM SINE Alu 0 302 135 1809 164 10 17 chr10 103276541 103276840 -42312448 - AluJb SINE Alu -15 297 1 21 0 0 0 chr10 103277005 103277026 -42312262 + AT_rich Low_complexity Low_complexity 1 21 0 441 264 227 50 chr10 103277188 103277624 -42311664 - MLT1H LTR MaLR 0 549 37 227 171 40 26 chr10 103277895 103277971 -42311317 + T-rich Low_complexity Low_complexity 5 81 0 2559 112 36 48 chr10 103278272 103278876 -42310412 + MER4B LTR ERV1 1 766 0 6452 87 35 0 chr10 103279458 103280728 -42308560 - L1PA10 LINE L1 -16 6152 4850 1905 158 32 59 chr10 103281088 103281191 -42308097 - L1MA9 LINE L1 -36 6276 6172 1497 172 31 28 chr10 103281191 103281481 -42307807 - AluJo SINE Alu -21 291 1 1905 158 32 59 chr10 103281481 103281852 -42307436 - L1MA9 LINE L1 -140 6172 5815 40 67 0 0 chr10 103281852 103281927 -42307361 + AT_rich Low_complexity Low_complexity 1 75 0 195 150 40 20 chr10 103281945 103282045 -42307243 + (TA)n Simple_repeat Simple_repeat 2 103 0 252 167 0 0 chr10 103282108 103282156 -42307132 - L1MA9 LINE L1 -449 5734 5687 1618 148 146 34 chr10 103282156 103282492 -42306796 + MSTA LTR MaLR 9 393 -35 2285 118 0 0 chr10 103282492 103282798 -42306490 - AluSg SINE Alu -4 306 1 1618 148 146 34 chr10 103282798 103282839 -42306449 + MSTA LTR MaLR 393 428 0 6932 212 26 66 chr10 103282839 103283395 -42305893 + MSTA-int LTR MaLR 1 578 -1073 1935 142 0 10 chr10 103283395 103283684 -42305604 - AluSx SINE Alu -24 288 3 6932 212 26 66 chr10 103283684 103284847 -42304441 + MSTA-int LTR MaLR 578 1651 0 1166 144 124 19 chr10 103284847 103285104 -42304184 + MSTA LTR MaLR 1 284 -144 189 0 0 0 chr10 103285104 103285125 -42304163 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 29086 98 9 19 chr10 103285125 103291551 -42297737 - L1PA6 LINE L1 -16 6453 6 263 194 45 0 chr10 103291826 103291893 -42297395 + (TA)n Simple_repeat Simple_repeat 2 71 0 261 258 32 0 chr10 103291906 103291968 -42297320 + L2 LINE L2 3205 3268 -4 534 99 14 0 chr10 103292755 103292826 -42296462 - MLT1B LTR MaLR -318 72 1 815 289 26 0 chr10 103292826 103293092 -42296196 - L1ME3A LINE L1 -238 5932 5660 1026 250 136 66 chr10 103293106 103293315 -42295973 - L1ME3A LINE L1 -984 5162 4969 2187 122 0 0 chr10 103293315 103293609 -42295679 - AluSg SINE Alu -16 294 1 1026 250 136 66 chr10 103293609 103293888 -42295400 - L1ME3A LINE L1 -1177 4969 4711 1894 149 0 31 chr10 103293888 103294210 -42295078 + AluJo SINE Alu 1 312 0 1026 250 136 66 chr10 103294210 103294473 -42294815 - L1ME3A LINE L1 -1435 4711 4358 1572 165 64 0 chr10 103294479 103294746 -42294542 + AluJb SINE Alu 14 297 -15 2075 90 61 0 chr10 103294748 103295026 -42294262 + AluSg SINE Alu 1 295 -15 26 30 0 0 chr10 103295039 103295072 -42294216 + AT_rich Low_complexity Low_complexity 1 33 0 1830 108 47 7 chr10 103296849 103297128 -42292160 - AluSx SINE Alu -22 290 1 255 152 0 0 chr10 103297392 103297438 -42291850 + T-rich Low_complexity Low_complexity 1 46 0 1498 180 0 0 chr10 103297438 103297683 -42291605 - AluSx SINE Alu -67 245 1 2715 146 33 33 chr10 103299319 103299834 -42289454 - L1MA7 LINE L1 0 6291 5777 1005 157 7 0 chr10 103299847 103300000 -42289288 + AluJb SINE Alu 136 289 -23 2105 126 20 23 chr10 103300011 103300360 -42288928 - L1MA7 LINE L1 -539 5752 5405 * 5950 110 13 1 chr10 103300359 103301215 -42288073 - L1PA10 LINE L1 -49 6119 5254 2889 102 59 0 chr10 103301296 103301700 -42287588 + MLT2A2 LTR ERVL 26 453 0 26711 95 9 3 chr10 103301701 103305954 -42283334 + ERVL-A2 LTR ERVL 2 4358 -1127 267 154 0 0 chr10 103305975 103306014 -42283274 - HERVL LTR ERVL -1260 4394 4356 5684 223 39 12 chr10 103306017 103307398 -42281890 - L1P LINE L1 -3790 2356 938 207 0 0 0 chr10 103307405 103307428 -42281860 + (TG)n Simple_repeat Simple_repeat 2 24 0 4971 55 22 0 chr10 103307448 103308033 -42281255 - L1PA5 LINE L1 -8 7584 6987 40015 72 2 8 chr10 103308033 103309480 -42279808 - L1PA5 LINE L1 -945 6639 5185 7603 53 9 0 chr10 103309480 103310694 -42278594 - L1PA5 LINE L1 -5 6149 4934 40015 72 2 8 chr10 103310694 103314468 -42274820 - L1PA5 LINE L1 -2399 5185 1449 3240 274 78 33 chr10 103314499 103315660 -42273628 - L1PA5 LINE L1 -6276 1305 92 1413 183 0 8 chr10 103315661 103315975 -42273313 - AluJo SINE Alu 0 384 73 984 134 12 0 chr10 103315976 103316140 -42273148 - L1 LINE L1 -1094 5052 4887 824 255 41 51 chr10 103316143 103316437 -42272851 - L1ME2 LINE L1 -34 6130 5840 * 903 214 17 43 chr10 103316429 103316556 -42272732 - L1ME2 LINE L1 -743 5403 5283 2015 141 3 3 chr10 103316556 103316853 -42272435 + AluSg SINE Alu 1 297 -13 903 214 17 43 chr10 103316853 103316959 -42272329 - L1ME2 LINE L1 -863 5283 5176 336 251 82 31 chr10 103316977 103317172 -42272116 - L1ME2 LINE L1 -1053 5093 4889 1687 185 19 43 chr10 103317289 103317662 -42271626 - MLT2C1 LTR ERVL -20 377 14 10351 195 38 10 chr10 103317677 103319796 -42269492 - ERVL-C1 LTR ERVL -7 5757 3550 4604 261 59 20 chr10 103319780 103321975 -42267313 - ERVL-C1 LTR ERVL -2955 2809 421 * 1620 185 3 23 chr10 103321975 103322283 -42267005 - AluJb SINE Alu -10 302 1 4604 261 59 20 chr10 103322283 103322721 -42266567 - ERVL-C1 LTR ERVL -5343 421 1 517 234 165 19 chr10 103322721 103322763 -42266525 - ERVL-C1 LTR ERVL 0 397 362 378 0 0 0 chr10 103322763 103322805 -42266483 + (CA)n Simple_repeat Simple_repeat 2 43 0 517 234 165 19 chr10 103322805 103322920 -42266368 - ERVL-C1 LTR ERVL -35 362 217 473 259 201 17 chr10 103322926 103323100 -42266188 - HERVL74 LTR ERVL -154 5531 5326 1016 201 5 15 chr10 103323103 103323307 -42265981 - MLT2C1 LTR ERVL -195 202 1 1034 97 16 75 chr10 103323372 103323558 -42265730 + L1MA7 LINE L1 6110 6284 -7 34 24 0 0 chr10 103323593 103323634 -42265654 + AT_rich Low_complexity Low_complexity 1 41 0 566 230 0 0 chr10 103323646 103323746 -42265542 + MLT1A1 LTR MaLR 157 256 -109 419 153 0 14 chr10 103323851 103323923 -42265365 + HERVL74 LTR ERVL 3571 3641 -2044 572 184 58 0 chr10 103323932 103324035 -42265253 + HERVL74 LTR ERVL 3897 4005 -1680 2062 164 0 0 chr10 103324092 103324404 -42264884 - AluJb SINE Alu 0 312 1 280 200 0 0 chr10 103324405 103324450 -42264838 + HERVL74 LTR ERVL 4029 4073 -1612 * 2554 215 50 82 chr10 103324441 103324853 -42264435 + HERVL74 LTR ERVL 4589 5013 -672 2000 169 86 3 chr10 103324853 103325190 -42264098 + MLT1A1 LTR MaLR 1 365 0 2554 215 50 82 chr10 103325190 103325753 -42263535 + HERVL74 LTR ERVL 5013 5641 -44 1863 255 44 31 chr10 103325774 103326296 -42262992 + MER74A LTR ERVL 6 534 -24 1320 301 59 26 chr10 103326351 103327146 -42262142 - L1M4 LINE L1 -1908 4238 3418 508 287 52 48 chr10 103327154 103327384 -42261904 - L1ME LINE L1 -5838 232 2 2285 153 28 46 chr10 103327561 103327955 -42261333 + MSTA LTR MaLR 1 388 -40 1845 176 3 3 chr10 103327955 103328267 -42261021 - AluSx SINE Alu 0 312 1 2285 153 28 46 chr10 103328267 103328303 -42260985 + MSTA LTR MaLR 388 423 -5 1063 95 82 0 chr10 103328906 103329053 -42260235 + AluSg/x SINE Alu 154 312 0 990 150 135 0 chr10 103329056 103329263 -42260025 + L1MC4 LINE L1 6855 7089 -953 548 111 0 0 chr10 103329320 103329392 -42259896 - AluSp/q SINE Alu -16 297 226 1589 265 44 19 chr10 103329395 103329919 -42259369 + L1MC4 LINE L1 7369 7905 -137 275 212 12 0 chr10 103329967 103330052 -42259236 + (TA)n Simple_repeat Simple_repeat 1 86 0 1971 245 101 35 chr10 103330097 103330869 -42258419 + L1ME3A LINE L1 5341 6163 -7 275 289 100 61 chr10 103331006 103331186 -42258102 + MIR3 SINE MIR 22 208 0 2327 210 61 14 chr10 103331849 103332420 -42256868 + L1MA9 LINE L1 5677 6274 -38 401 299 9 0 chr10 103333036 103333143 -42256145 + MIR SINE MIR 35 142 -66 3266 122 25 54 chr10 103333364 103333880 -42255408 - MER61D LTR ERV1 0 501 1 400 246 16 66 chr10 103334007 103334071 -42255217 + MER5B DNA MER1_type 1 59 -119 1497 138 170 0 chr10 103334071 103334338 -42254950 + AluSp SINE Alu 2 310 0 400 246 16 66 chr10 103334338 103334394 -42254894 + MER5B DNA MER1_type 59 116 -62 6146 160 72 31 chr10 103334821 103335790 -42253498 - L1MA6 LINE L1 0 6300 5372 261 0 0 0 chr10 103335790 103335819 -42253469 + (TTAA)n Simple_repeat Simple_repeat 1 29 0 1608 197 11 0 chr10 103335820 103336099 -42253189 - AluJo SINE Alu -30 282 1 6146 160 72 31 chr10 103336099 103337338 -42251950 - L1MA6 LINE L1 -927 5373 3992 196 173 58 19 chr10 103337976 103338028 -42251260 + MER5B DNA MER1_type 1 54 -124 237 326 155 26 chr10 103338163 103338356 -42250932 + MIR SINE MIR 24 241 -21 1114 149 36 0 chr10 103339090 103339284 -42250004 - L1MA4A LINE L1 0 6303 6103 29 47 0 0 chr10 103339980 103340023 -42249265 + AT_rich Low_complexity Low_complexity 1 43 0 783 234 19 34 chr10 103340099 103340315 -42248973 + MER74A LTR ERVL 1 267 -355 598 170 28 9 chr10 103340315 103340421 -42248867 + MER2 DNA MER2_type 1 108 -237 590 186 97 0 chr10 103340462 103340586 -42248702 + MER2 DNA MER2_type 209 344 -1 1514 215 13 69 chr10 103340586 103340963 -42248325 + MER74B LTR ERVL 267 622 0 1352 180 69 33 chr10 103341091 103341132 -42248156 + MSTA LTR MaLR 1 39 -336 16469 39 18 0 chr10 103341132 103343936 -42245352 + L1PA4 LINE L1 3325 6153 -2 1352 180 69 33 chr10 103343936 103344267 -42245021 + MSTA LTR MaLR 39 375 0 302 163 0 0 chr10 103344651 103344700 -42244588 - MSTB LTR MaLR -377 49 1 2497 80 0 0 chr10 103345912 103346239 -42243049 - L1PA7 LINE L1 -4 6150 5824 613 71 0 0 chr10 103346239 103346324 -42242964 - L1P3 LINE L1 -4205 2256 2172 * 39555 60 4 1 chr10 103346322 103352401 -42236887 + L1PA4 LINE L1 61 6155 0 11142 123 15 40 chr10 103352802 103354976 -42234312 - L1P3 LINE L1 -4275 2186 8 515 199 88 84 chr10 103355024 103355250 -42234038 - L1M4 LINE L1 -5485 1057 831 23 33 0 0 chr10 103355274 103355304 -42233984 + AT_rich Low_complexity Low_complexity 1 30 0 398 100 0 14 chr10 103355310 103355380 -42233908 + (GGAA)n Simple_repeat Simple_repeat 2 70 0 818 320 63 50 chr10 103355406 103355940 -42233348 - L1M4 LINE L1 -5804 738 190 2761 90 13 0 chr10 103355940 103356318 -42232970 + L1PA10 LINE L1 5782 6164 -4 818 320 63 50 chr10 103356318 103356509 -42232779 - L1M4 LINE L1 -6352 190 3 25 0 0 0 chr10 103357541 103357566 -42231722 + AT_rich Low_complexity Low_complexity 1 25 0 3198 200 42 44 chr10 103359365 103360775 -42228513 - L1MB7 LINE L1 -11 6173 4763 1471 195 39 7 chr10 103360775 103361057 -42228231 - AluSx SINE Alu -19 293 3 3198 200 42 44 chr10 103361057 103361358 -42227930 - L1MB7 LINE L1 -1421 4763 4463 229 122 0 0 chr10 103361830 103361871 -42227417 + MADE1 DNA Mariner 36 76 -4 1568 194 13 20 chr10 103362201 103362500 -42226788 - AluJb SINE Alu -15 297 1 824 199 36 15 chr10 103362500 103362614 -42226674 + MER2 DNA MER2_type 146 267 -78 1847 170 0 34 chr10 103362614 103362937 -42226351 - AluJo SINE Alu 0 312 1 824 199 36 15 chr10 103362937 103363018 -42226270 + MER2 DNA MER2_type 267 345 0 4325 156 12 21 chr10 103363018 103363865 -42225423 - L1MA7 LINE L1 -187 6104 5266 27 0 0 0 chr10 103363891 103363918 -42225370 + AT_rich Low_complexity Low_complexity 1 27 0 26413 55 3 2 chr10 103363971 103368320 -42220968 - L1PA5 LINE L1 0 6154 1802 4804 186 26 3 chr10 103368320 103369393 -42219895 - L1MA7 LINE L1 -1062 5084 3987 687 300 61 23 chr10 103369390 103369920 -42219368 - L1M3de LINE L1 -5532 1121 360 * 1578 170 10 24 chr10 103370200 103370358 -42218930 - AluJb SINE Alu -19 293 139 2259 112 7 0 chr10 103370358 103370663 -42218625 - AluSx SINE Alu -5 307 1 1578 170 10 24 chr10 103370663 103370793 -42218495 - AluJb SINE Alu -173 139 9 22 35 0 0 chr10 103371155 103371184 -42218104 + AT_rich Low_complexity Low_complexity 1 29 0 2120 112 3 7 chr10 103371794 103372104 -42217184 - AluSx SINE Alu 0 309 1 24 0 0 0 chr10 103372179 103372203 -42217085 + AT_rich Low_complexity Low_complexity 1 24 0 2356 113 11 3 chr10 103372253 103372616 -42216672 - L1PB4 LINE L1 -2 6154 5789 1016 170 0 0 chr10 103372678 103372866 -42216422 - L1PB4 LINE L1 -383 5773 5586 254 327 186 0 chr10 103373452 103373678 -42215610 + HAL1 LINE L1 378 645 -1862 585 230 32 32 chr10 103373718 103373905 -42215383 + HAL1 LINE L1 1332 1518 -989 511 272 116 72 chr10 103373922 103374683 -42214605 + HAL1 LINE L1 1623 2416 -91 611 268 20 40 chr10 103375480 103375779 -42213509 - L1M4 LINE L1 -1391 4755 4463 180 67 22 44 chr10 103375860 103375905 -42213383 + (TATAA)n Simple_repeat Simple_repeat 5 48 0 574 221 62 0 chr10 103375915 103376028 -42213260 - FLAM_A SINE Alu -13 120 1 424 295 79 32 chr10 103376058 103376553 -42212735 - L1M4 LINE L1 -1785 4361 3844 316 311 22 7 chr10 103376587 103376722 -42212566 - L1M4 LINE L1 -2380 3766 3630 3466 62 20 2 chr10 103376991 103377443 -42211845 - L1PA7 LINE L1 -3 6151 5692 603 228 0 38 chr10 103377750 103377908 -42211380 + MER3 DNA MER1_type 44 195 -14 247 254 18 103 chr10 103378064 103378122 -42211166 + MER46C DNA MER2_type 122 183 -155 1918 192 0 0 chr10 103378122 103378434 -42210854 + AluJb SINE Alu 1 312 0 247 254 18 103 chr10 103378434 103378540 -42210748 + MER46C DNA MER2_type 183 272 -66 238 286 9 18 chr10 103378542 103378654 -42210634 + (TA)n Simple_repeat Simple_repeat 2 112 0 1139 279 97 24 chr10 103378673 103379376 -42209912 - L1MC4 LINE L1 -190 7852 7099 4991 170 41 17 chr10 103381428 103381887 -42207401 + L1PA16 LINE L1 4105 4551 -1615 2276 120 0 0 chr10 103381887 103382195 -42207093 + AluY SINE Alu 1 308 -3 4991 170 41 17 chr10 103382195 103383718 -42205570 + L1PA16 LINE L1 4551 6123 -43 299 287 66 33 chr10 103383929 103384051 -42205237 + MIR3 SINE MIR 68 193 -15 230 320 100 34 chr10 103385369 103385638 -42203650 - L2 LINE L2 -338 2976 2690 259 293 0 0 chr10 103385792 103385850 -42203438 + L2 LINE L2 3210 3267 -5 219 271 0 0 chr10 103385913 103385972 -42203316 + (TCCA)n Simple_repeat Simple_repeat 3 61 0 231 309 12 0 chr10 103387315 103387396 -42201892 + (TA)n Simple_repeat Simple_repeat 2 83 0 1948 123 28 3 chr10 103387465 103387789 -42201499 - L1PA14 LINE L1 -1 6160 5829 1649 221 34 32 chr10 103387942 103388542 -42200746 - MER65-int LTR ERV1 -587 4284 3605 6277 191 17 6 chr10 103388577 103390730 -42198558 - L1PA15 LINE L1 -1 6866 4693 1737 226 6 38 chr10 103390788 103391262 -42198026 - L1PA15 LINE L1 -2137 4711 4253 4334 186 54 3 chr10 103491272 103492166 -42097122 - L1PA15 LINE L1 -4676 2172 812 6723 185 24 10 chr10 103492259 103492316 -42096972 + L1 LINE L1 2764 2819 -3327 2083 147 0 3 chr10 103492316 103492616 -42096672 + AluSp SINE Alu 1 299 -14 6723 185 24 10 chr10 103492616 103493962 -42095326 + L1 LINE L1 2819 4186 -1960 21 36 0 0 chr10 103494093 103494121 -42095167 + AT_rich Low_complexity Low_complexity 1 28 0 230 274 142 9 chr10 103494216 103494329 -42094959 + MIR SINE MIR 20 147 -61 4824 159 46 14 chr10 103494379 103496154 -42093134 - L1MA3 LINE L1 -17 6288 4456 5233 73 1 0 chr10 103496292 103496999 -42092289 + L1PA5 LINE L1 5452 6159 0 334 122 0 0 chr10 103497000 103497049 -42092239 + L1MCa LINE L1 1879 1927 -4499 1176 127 4 40 chr10 103497072 103497300 -42091988 - L1PA13 LINE L1 -5026 1761 1542 3318 121 2 0 chr10 103497303 103497800 -42091488 + L1P LINE L1 233 730 -5416 745 183 0 7 chr10 103497797 103497934 -42091354 - L1PA13 LINE L1 -5242 1545 1410 * 1345 182 77 18 chr10 103497935 103498355 -42090933 - MER31-int LTR ERV1 -1169 3767 3368 1853 227 25 0 chr10 103498432 103498864 -42090424 + MER61D-int LTR ERV1 4356 4798 -73 2824 213 42 5 chr10 103498866 103499537 -42089751 + L1MC1 LINE L1 5638 6333 0 3665 70 2 0 chr10 103500023 103500525 -42088763 - L1P LINE L1 -893 5253 4751 14420 42 0 0 chr10 103500527 103503060 -42086228 - L1PA4 LINE L1 -3 6152 3620 12249 105 3 0 chr10 103503060 103504831 -42084457 - L1P LINE L1 -4360 1786 11 5179 221 32 50 chr10 103505234 103506551 -42082737 + L1M2 LINE L1 3998 5307 -931 1731 207 0 0 chr10 103506551 103506851 -42082437 + AluJo SINE Alu 1 300 -12 5179 221 32 50 chr10 103506851 103507018 -42082270 + L1M2 LINE L1 5307 5476 -762 989 154 0 11 chr10 103507018 103507206 -42082082 + L1MA6 LINE L1 6115 6300 0 361 258 16 89 chr10 103507623 103507680 -42081608 - MER5B DNA MER1_type -63 115 55 240 35 0 0 chr10 103507680 103507709 -42081579 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 2065 107 7 0 chr10 103507711 103507991 -42081297 - AluSq SINE Alu -31 282 1 361 258 16 89 chr10 103507991 103508054 -42081234 - MER5B DNA MER1_type -124 54 1 2728 138 22 50 chr10 103508181 103508681 -42080607 + MER61D LTR ERV1 1 486 -15 399 322 12 6 chr10 103508873 103509043 -42080245 - MIR SINE MIR -66 142 20 1732 211 103 17 chr10 103509648 103510173 -42079115 - L1MA9 LINE L1 -38 6274 5705 372 292 69 23 chr10 103510301 103510431 -42078857 - MIR SINE MIR -67 195 60 298 257 112 67 chr10 103510833 103511012 -42078276 - MIR3 SINE MIR 0 208 22 1075 269 91 33 chr10 103511142 103511409 -42077879 - L1ME3A LINE L1 -1 6161 5911 2239 112 3 3 chr10 103511409 103511712 -42077576 - AluSp SINE Alu -10 303 1 1075 269 91 33 chr10 103511712 103512128 -42077160 - L1ME3A LINE L1 -251 5911 5436 * 11682 40 1 4 chr10 103512125 103514275 -42075013 - L1PA4 LINE L1 -117 6038 3894 27452 55 4 2 chr10 103514282 103517915 -42071373 + L1P LINE L1 2 3639 -2507 7175 54 2 0 chr10 103517909 103518874 -42070414 - L1PA4 LINE L1 -3060 3086 2120 * 335 348 32 26 chr10 103519452 103519607 -42069681 + MIR SINE MIR 35 190 -72 220 300 30 70 chr10 103519909 103520009 -42069279 + MER5B DNA MER1_type 1 96 -82 7761 31 2 2 chr10 103520707 103521604 -42067684 - MER11D LTR ERVK 0 897 1 233 266 116 40 chr10 103522742 103522811 -42066477 + MIR SINE MIR 53 115 -147 2216 125 0 19 chr10 103522811 103523123 -42066165 - AluSg SINE Alu -4 306 1 233 266 116 40 chr10 103523123 103523226 -42066062 + MIR SINE MIR 115 238 -24 21 36 0 0 chr10 103524483 103524511 -42064777 + AT_rich Low_complexity Low_complexity 1 28 0 6381 127 30 19 chr10 103524969 103526028 -42063260 - MER11C LTR ERVK 0 1071 1 6553 96 17 0 chr10 103526069 103528082 -42061206 + L1PA8 LINE L1 3985 6168 -4 2097 132 10 0 chr10 103528379 103528682 -42060606 + AluSp SINE Alu 1 306 -7 196 274 16 32 chr10 103530099 103530161 -42059127 + MIR SINE MIR 66 126 -82 23 0 0 0 chr10 103530543 103530566 -42058722 + AT_rich Low_complexity Low_complexity 1 23 0 26 30 0 0 chr10 103530607 103530640 -42058648 + AT_rich Low_complexity Low_complexity 1 33 0 6187 83 6 0 chr10 103530970 103531864 -42057424 + L1P LINE L1 3220 4118 -2028 1959 158 7 0 chr10 103532297 103532607 -42056681 + AluSx SINE Alu 1 312 0 2031 178 5 5 chr10 103533281 103533657 -42055631 - L1PA16 LINE L1 -6 6160 5785 791 93 0 0 chr10 103533659 103533767 -42055521 - THE1B LTR MaLR -5 359 252 935 154 0 0 chr10 103533782 103533931 -42055357 - THE1B LTR MaLR -215 149 1 2956 124 15 19 chr10 103533931 103534472 -42054816 - L1PA16 LINE L1 -374 5792 5254 337 289 28 14 chr10 103535040 103535182 -42054106 + HAL1 LINE L1 1351 1494 -1013 293 243 0 0 chr10 103535232 103535306 -42053982 + HAL1 LINE L1 1637 1710 -797 321 306 72 47 chr10 103535379 103535960 -42053328 + HAL1 LINE L1 1821 2416 -91 9303 28 0 0 chr10 103536155 103538030 -42051258 - L1PA2 LINE L1 -5 6150 4276 5291 211 19 7 chr10 103538143 103539862 -42049426 - L1MDa LINE L1 -2608 4957 3221 472 302 64 39 chr10 103539863 103540068 -42049220 - L1MDa LINE L1 -4822 2743 2479 1201 285 51 21 chr10 103540070 103540790 -42048498 - L1MDa LINE L1 -5170 2576 1835 34 55 0 0 chr10 103540808 103540863 -42048425 + AT_rich Low_complexity Low_complexity 1 55 0 2012 205 77 8 chr10 103540894 103541401 -42047887 + LTR1B LTR ERV1 285 826 0 633 312 35 17 chr10 103541578 103541809 -42047479 + MIR SINE MIR 2 236 -26 8557 157 23 24 chr10 103541907 103543515 -42045773 + L1P LINE L1 11 1617 -4529 7098 55 2 0 chr10 103543515 103544750 -42044538 + L1PA6 LINE L1 4911 6150 -4 382 280 91 14 chr10 103545009 103545152 -42044136 - L2 LINE L2 -2 3311 3158 428 283 20 26 chr10 103545161 103545313 -42043975 + MIR SINE MIR 7 157 -105 660 217 113 20 chr10 103545344 103545547 -42043741 + MLT1D LTR MaLR 139 360 -145 265 308 34 0 chr10 103545853 103545970 -42043318 + (TA)n Simple_repeat Simple_repeat 2 122 0 1321 126 0 0 chr10 103546246 103546428 -42042860 + AluSq SINE Alu 1 182 -131 607 143 10 0 chr10 103546528 103546626 -42042662 + AluSg/x SINE Alu 197 295 -14 342 204 0 0 chr10 103547555 103547643 -42041645 + (TGGA)n Simple_repeat Simple_repeat 2 89 0 234 239 0 0 chr10 103547705 103547751 -42041537 - L2 LINE L2 -3 3310 3265 876 257 53 53 chr10 103548286 103548644 -42040644 + MLT1A1 LTR MaLR 1 358 -7 452 18 18 0 chr10 103548672 103548729 -42040559 + (TTTA)n Simple_repeat Simple_repeat 2 59 0 1960 150 131 8 chr10 103548735 103549116 -42040172 + MSTA LTR MaLR 1 428 0 1837 40 0 0 chr10 103550466 103550689 -42038599 + L1PA4 LINE L1 5930 6152 -3 273 281 39 8 chr10 103550700 103550828 -42038460 - L1M3de LINE L1 -4667 1986 1855 210 37 0 0 chr10 103550828 103550855 -42038433 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 10663 44 1 0 chr10 103551017 103553111 -42036177 + L1PA4 LINE L1 4075 6170 0 1111 47 0 33 chr10 103553339 103553520 -42035768 + L1PA3 LINE L1 6010 6155 0 719 278 81 54 chr10 103553523 103554213 -42035075 + L1MC4 LINE L1 7141 7849 -193 8634 26 0 6 chr10 103554493 103554689 -42034599 - L1P LINE L1 -949 5197 5001 2763 23 0 0 chr10 103554689 103554994 -42034294 + AluYa5 SINE Alu 1 305 -6 8634 26 0 6 chr10 103554994 103555878 -42033410 - L1P LINE L1 -1145 5001 4123 * 12897 31 4 2 chr10 103555866 103557503 -42031785 + L1P LINE L1 2652 4291 -1855 338 143 29 0 chr10 103557669 103557739 -42031549 + L1MC4 LINE L1 6984 7055 -987 1627 271 40 13 chr10 103557855 103558479 -42030809 + L1MC4 LINE L1 7266 7906 -136 248 185 0 15 chr10 103558535 103558600 -42030688 + (TA)n Simple_repeat Simple_repeat 1 64 0 7465 91 2 0 chr10 103558717 103559751 -42029537 + L1P LINE L1 13 1048 -5098 355 280 53 53 chr10 103559913 103560063 -42029225 + L1M4 LINE L1 4958 5107 -1039 248 235 55 0 chr10 103560141 103560209 -42029079 + MER58B DNA MER1_type 30 101 -240 683 200 7 7 chr10 103560276 103560411 -42028877 + MER58B DNA MER1_type 206 340 -1 23 33 0 0 chr10 103561003 103561033 -42028255 + AT_rich Low_complexity Low_complexity 1 30 0 364 294 70 14 chr10 103561446 103561589 -42027699 + L1M4 LINE L1 3614 3764 -2382 932 285 62 41 chr10 103561645 103562400 -42026888 + L1M4 LINE L1 3982 4752 -1394 3331 224 21 7 chr10 103562968 103564050 -42025238 + L1M4 LINE L1 3440 4527 -3038 3783 91 0 2 chr10 103564051 103564577 -42024711 + LTR17 LTR ERV1 256 780 0 25147 119 58 57 chr10 103564577 103570374 -42018914 + HERV17 LTR ERV1 1 6005 -2621 255 59 0 0 chr10 103570374 103570408 -42018880 + HERV17 LTR ERV1 7515 7548 -1078 * 2282 62 0 0 chr10 103570398 103570690 -42018598 + HERV17 LTR ERV1 8335 8626 0 2133 68 19 7 chr10 103570692 103571001 -42018287 + LTR17 LTR ERV1 3 315 -465 2114 193 28 7 chr10 103571001 103571545 -42017743 + L1M4 LINE L1 4483 5037 -2528 23121 48 45 3 chr10 103571651 103574767 -42014521 - L1P LINE L1 -2898 3248 2 22 35 0 0 chr10 103574774 103574803 -42014485 + AT_rich Low_complexity Low_complexity 1 29 0 6068 143 26 22 chr10 103574847 103576276 -42013012 - L1MA1 LINE L1 0 6302 4867 900 104 7 0 chr10 103576276 103576411 -42012877 - THE1B LTR MaLR 0 364 229 8948 126 59 13 chr10 103576559 103578723 -42010565 - L1PBa LINE L1 -3816 3046 634 639 137 24 16 chr10 103578885 103579009 -42010279 + L1MA5 LINE L1 6175 6299 -1 73 82 0 0 chr10 103579009 103579180 -42010108 + AT_rich Low_complexity Low_complexity 1 171 0 2323 183 27 24 chr10 103579187 103579734 -42009554 + L1MB3 LINE L1 5476 6024 -159 807 151 0 0 chr10 103580040 103580159 -42009129 - AluSq/x SINE Alu -190 122 4 643 193 43 0 chr10 103580163 103580324 -42008964 + L1MB3 LINE L1 6007 6174 -9 1204 240 44 23 chr10 103580341 103580816 -42008472 + L1M4 LINE L1 5195 5679 -1886 1736 160 50 3 chr10 103580889 103581207 -42008081 + L1PA15-16 LINE L1 6 338 -6511 3428 265 40 31 chr10 103581366 103582890 -42006398 - L1MCa LINE L1 -1416 4799 3262 1566 255 64 17 chr10 103582896 103583922 -42005366 - L1MCa LINE L1 -3947 2268 1280 323 277 45 0 chr10 103583947 103584059 -42005229 - L1ME3A LINE L1 -8 6162 6046 4269 187 55 10 chr10 103584210 103584240 -42005048 - L1M1 LINE L1 -494 5809 5782 1732 117 27 0 chr10 103584240 103584497 -42004791 - L1PA11 LINE L1 -2 6172 5909 4269 187 55 10 chr10 103584497 103585464 -42003824 - L1M1 LINE L1 -521 5782 4860 1584 31 0 11 chr10 103585464 103585655 -42003633 - AluYa5 SINE Alu -5 306 118 4269 187 55 10 chr10 103585655 103586471 -42002817 - L1M1 LINE L1 -1443 4860 3792 2058 146 3 0 chr10 103586471 103586766 -42002522 - AluSx SINE Alu -16 296 1 4269 187 55 10 chr10 103586766 103586874 -42002414 - L1M1 LINE L1 -2511 3792 3690 7977 96 6 2 chr10 103586974 103589028 -42000260 + L1PA8 LINE L1 4111 6173 0 215 350 30 0 chr10 103589776 103589876 -41999412 - MER5B DNA MER1_type -74 104 2 185 400 100 0 chr10 103590174 103590304 -41998984 - MIR3 SINE MIR -26 182 40 21 0 0 0 chr10 103591324 103591345 -41997943 + AT_rich Low_complexity Low_complexity 1 21 0 4774 219 18 38 chr10 103591738 103593221 -41996067 - L1 LINE L1 -1420 4726 3274 1157 179 85 0 chr10 103593339 103593574 -41995714 + Tigger1 DNA MER2_type 2164 2418 0 186 357 0 14 chr10 103594122 103594192 -41995096 + MIR SINE MIR 34 102 -106 2184 192 30 6 chr10 103594277 103594802 -41994486 - L1M4c LINE L1 -4896 1488 951 3524 138 16 34 chr10 103594802 103595413 -41993875 - MER4A LTR ERV1 0 600 1 6907 142 68 36 chr10 103595425 103595615 -41993673 - MER4A-int LTR ERV1 -5 6593 6411 182 61 0 30 chr10 103595615 103595648 -41993640 + (CAA)n Simple_repeat Simple_repeat 2 33 0 6907 142 68 36 chr10 103595648 103596968 -41992320 - MER4A-int LTR ERV1 -187 6411 5034 1899 224 55 4 chr10 103597110 103597642 -41991646 - L1 LINE L1 -853 5293 4735 6292 146 5 0 chr10 103597650 103598831 -41990457 - L1MA2 LINE L1 0 6304 5117 * 19868 142 24 76 chr10 103598829 103599234 -41990054 - L1P LINE L1 -1903 4243 3818 1966 135 4 4 chr10 103599234 103599538 -41989750 - AluSg SINE Alu 0 304 1 19868 142 24 76 chr10 103599538 103603597 -41985691 - L1P LINE L1 -2328 3818 12 3687 223 16 10 chr10 103603609 103604439 -41984849 - L1M2a LINE L1 -5044 2124 1290 282 132 0 0 chr10 103605592 103605645 -41983643 + (T)n Simple_repeat Simple_repeat 1 53 0 22 0 0 0 chr10 103605886 103605908 -41983380 + AT_rich Low_complexity Low_complexity 1 22 0 7721 19 0 3 chr10 103605938 103607006 -41982282 - L1PA2 LINE L1 -2 6153 5088 15101 140 17 23 chr10 103607152 103609870 -41979418 - L1P LINE L1 -3434 2712 12 3939 130 6 0 chr10 103609880 103610543 -41978745 - L1P LINE L1 -3063 3083 2417 528 175 0 0 chr10 103610543 103610640 -41978648 - LTR12 LTR ERV1 -135 579 483 226 289 11 0 chr10 103610643 103610733 -41978555 - LTR30 LTR ERV1 -79 643 553 1734 88 7 78 chr10 103610735 103611041 -41978247 - LTR12 LTR ERV1 -430 284 1 4484 120 7 4 chr10 103611041 103611758 -41977530 - L1PA15-16 LINE L1 -3733 3116 2398 2808 211 56 16 chr10 103611738 103612436 -41976852 - L1PA15-16 LINE L1 -4957 1892 1167 * 23613 98 10 3 chr10 103612551 103616069 -41973219 - L1P LINE L1 -2604 3542 3 3488 66 2 10 chr10 103616068 103616568 -41972720 - L1P LINE L1 -1583 4563 4068 * 17723 71 8 2 chr10 103616590 103619788 -41969500 - L1PA5 LINE L1 -9 6145 2931 566 154 39 0 chr10 103619896 103620000 -41969288 - L1M2 LINE L1 -6739 110 3 1962 207 49 22 chr10 103620001 103620509 -41968779 - L1M4c LINE L1 -5679 705 184 1327 104 5 68 chr10 103620511 103620733 -41968555 - AluSc SINE Alu 0 309 102 2548 164 28 54 chr10 103620733 103621228 -41968060 - Tigger3b DNA MER2_type -2465 563 84 1987 147 0 7 chr10 103621228 103621520 -41967768 - AluSx SINE Alu -22 290 1 2548 164 28 54 chr10 103621520 103621602 -41967686 - Tigger3b DNA MER2_type -2944 84 1 8089 238 40 22 chr10 103621611 103621914 -41967374 + L1MC1 LINE L1 1688 1984 -4629 1982 125 4 0 chr10 103621914 103622216 -41967072 + AluSp SINE Alu 12 314 0 8089 238 40 22 chr10 103622216 103624668 -41964620 + L1MC1 LINE L1 1984 4391 -2222 191 36 36 0 chr10 103624668 103624696 -41964592 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 8089 238 40 22 chr10 103624696 103625445 -41963843 + L1MC1 LINE L1 4391 5125 -1488 1933 128 3 16 chr10 103625445 103625751 -41963537 + AluSg SINE Alu 1 302 -8 798 89 0 0 chr10 103625751 103625863 -41963425 + (TA)n Simple_repeat Simple_repeat 2 113 0 8089 238 40 22 chr10 103625863 103627122 -41962166 + L1MC1 LINE L1 5124 6594 -19 225 269 71 110 chr10 103627252 103627296 -41961992 + MIR3 SINE MIR 27 71 -137 2288 108 0 3 chr10 103627296 103627601 -41961687 + AluY SINE Alu 1 304 -7 225 269 71 110 chr10 103627601 103627738 -41961550 + MIR3 SINE MIR 71 201 -7 321 287 21 0 chr10 103628191 103628285 -41961003 + MIR SINE MIR 50 145 -63 335 348 32 26 chr10 103629066 103629221 -41960067 + MIR SINE MIR 35 190 -72 220 300 30 70 chr10 103629523 103629623 -41959665 + MER5B DNA MER1_type 1 96 -82 7761 31 2 2 chr10 103630321 103631218 -41958070 - MER11D LTR ERVK 0 897 1 233 266 116 40 chr10 103632356 103632425 -41956863 + MIR SINE MIR 53 115 -147 2207 125 0 19 chr10 103632425 103632736 -41956552 - AluSg SINE Alu -5 305 1 233 266 116 40 chr10 103632736 103632839 -41956449 + MIR SINE MIR 115 238 -24 21 36 0 0 chr10 103634096 103634124 -41955164 + AT_rich Low_complexity Low_complexity 1 28 0 6381 127 30 19 chr10 103634582 103635641 -41953647 - MER11C LTR ERVK 0 1071 1 6553 97 17 0 chr10 103635682 103637694 -41951594 + L1PA8 LINE L1 3985 6168 -4 2097 132 10 0 chr10 103637991 103638294 -41950994 + AluSp SINE Alu 1 306 -7 196 274 16 32 chr10 103639711 103639773 -41949515 + MIR SINE MIR 66 126 -82 23 0 0 0 chr10 103640155 103640178 -41949110 + AT_rich Low_complexity Low_complexity 1 23 0 26 30 0 0 chr10 103640219 103640252 -41949036 + AT_rich Low_complexity Low_complexity 1 33 0 8608 104 66 0 chr10 103640582 103641978 -41947310 + L1PA7 LINE L1 3220 4707 -1439 5773 74 1 1 chr10 103641978 103642728 -41946560 + L1PA7 LINE L1 5388 6140 -14 1203 201 44 44 chr10 103643121 103643510 -41945778 - L1M4 LINE L1 -1220 4926 4538 * 3046 224 44 23 chr10 103643497 103644219 -41945069 - L1MB5 LINE L1 0 7195 6490 195 42 0 0 chr10 103644219 103644243 -41945045 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 1952 149 0 0 chr10 103644243 103644525 -41944763 - AluSx SINE Alu -30 282 1 3046 224 44 23 chr10 103644525 103645234 -41944054 - L1MB5 LINE L1 -704 6491 5733 1324 181 33 21 chr10 103645236 103645740 -41943548 + LTR9 LTR ERV1 1 612 0 697 220 6 0 chr10 103645746 103645919 -41943369 - L1MB5 LINE L1 -1483 5684 5511 243 0 0 0 chr10 103646061 103646088 -41943200 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 17546 44 8 0 chr10 103646088 103649050 -41940238 - L1PA4 LINE L1 -11 6144 3162 20120 82 7 0 chr10 103649096 103651914 -41937374 - L1PA4 LINE L1 -3302 2844 7 4392 200 63 4 chr10 103651919 103653738 -41935550 - L1PA16 LINE L1 -8 6861 4934 8079 161 57 8 chr10 103653790 103655400 -41933888 - L1PA16 LINE L1 -3899 2950 1261 1456 236 33 26 chr10 103655391 103655934 -41933354 - L1MB5 LINE L1 -1813 5354 4808 * 34 24 0 0 chr10 103655936 103655977 -41933311 + AT_rich Low_complexity Low_complexity 1 41 0 716 200 6 6 chr10 103655983 103656153 -41933135 - L1MB3 LINE L1 -7 6176 6007 731 172 0 16 chr10 103656155 103656277 -41933011 + AluSg SINE Alu 1 120 -190 1913 156 10 28 chr10 103656591 103656988 -41932300 - L1MB3 LINE L1 -159 6024 5635 1091 114 0 7 chr10 103656994 103657143 -41932145 - AluSg SINE Alu -162 148 1 11521 115 11 4 chr10 103657143 103659046 -41930242 - L1P3 LINE L1 -2291 4170 2255 9733 142 63 22 chr10 103659053 103661052 -41928236 - L1P3 LINE L1 -4375 2086 1 3683 224 14 10 chr10 103661055 103661886 -41927402 - L1MB5 LINE L1 -5044 2124 1290 2091 158 0 0 chr10 103663562 103663873 -41925415 + AluSx SINE Alu 1 311 -1 1954 192 13 5 chr10 103664541 103664922 -41924366 - L1PA16 LINE L1 -4 6162 5779 743 104 0 0 chr10 103664922 103665028 -41924260 - THE1B LTR MaLR -7 357 252 977 133 0 0 chr10 103665040 103665190 -41924098 - THE1B LTR MaLR -214 150 1 2903 126 7 35 chr10 103665190 103665736 -41923552 - L1PA16 LINE L1 -374 5792 5262 279 310 21 7 chr10 103666337 103666479 -41922809 + HAL1 LINE L1 1351 1494 -1013 569 294 108 42 chr10 103666514 103667255 -41922033 + HAL1 LINE L1 1627 2416 -91 23 54 0 0 chr10 103667438 103667475 -41921813 + AT_rich Low_complexity Low_complexity 1 37 0 13320 190 20 10 chr10 103667509 103668911 -41920377 - L1MA1 LINE L1 0 7721 6334 2177 130 34 8 chr10 103668911 103669266 -41920022 - THE1B LTR MaLR 0 364 1 13320 190 20 10 chr10 103669266 103672104 -41917184 - L1MA1 LINE L1 -1387 6334 3431 476 283 37 37 chr10 103672660 103672932 -41916356 - L1M4 LINE L1 -1394 4752 4481 457 289 51 33 chr10 103673052 103673443 -41915845 - L1M4 LINE L1 -1854 4292 3895 2036 192 33 21 chr10 103673445 103673866 -41915422 - MSTB LTR MaLR 0 426 1 28 29 0 0 chr10 103674477 103674512 -41914776 + AT_rich Low_complexity Low_complexity 1 35 0 921 239 102 7 chr10 103675080 103675365 -41913923 - MER58B DNA MER1_type 0 341 30 371 295 53 19 chr10 103675444 103675651 -41913637 - L1M4 LINE L1 -1031 5115 4902 32 0 0 0 chr10 103675778 103675810 -41913478 + AT_rich Low_complexity Low_complexity 1 32 0 638 297 76 46 chr10 103675886 103676620 -41912668 - L1MC4 LINE L1 -188 7854 7099 195 378 11 0 chr10 103677027 103677117 -41912171 + MIR3 SINE MIR 93 183 -25 1955 160 129 8 chr10 103678307 103678688 -41910600 - MSTA LTR MaLR 0 428 2 1072 233 56 51 chr10 103678744 103679100 -41910188 - MLT1A1 LTR MaLR -7 358 1 262 245 0 0 chr10 103679654 103679703 -41909585 + L2 LINE L2 3216 3264 -8 408 158 0 0 chr10 103679773 103679849 -41909439 + (TCCA)n Simple_repeat Simple_repeat 3 78 0 2209 114 0 0 chr10 103680812 103681102 -41908186 - AluY SINE Alu -21 290 1 2083 148 0 0 chr10 103681266 103681586 -41907702 - AluSq SINE Alu 0 313 1 250 154 15 31 chr10 103681945 103682010 -41907278 + (CATATA)n Simple_repeat Simple_repeat 3 66 0 533 226 111 42 chr10 103682290 103682480 -41906808 - MLT1D LTR MaLR -120 385 183 2575 172 24 19 chr10 103682484 103683050 -41906238 - LTR10A LTR ERV1 -21 612 1 10279 207 38 19 chr10 103683051 103685579 -41903709 - LTR10A-int LTR ERV1 -2 7776 5298 1867 111 4 0 chr10 103685579 103685831 -41903457 - AluSg SINE Alu -52 258 6 10279 207 38 19 chr10 103685831 103687077 -41902211 - LTR10A-int LTR ERV1 -2480 5298 1808 342 214 167 0 chr10 103687079 103687163 -41902125 + LTR8 LTR ERV1 156 253 -438 3766 174 9 48 chr10 103687165 103688271 -41901017 - HERVI LTR ERV1 -3202 4112 956 584 262 11 27 chr10 103688251 103688434 -41900854 - HERVI LTR ERV1 -4468 3317 3138 * 1067 140 116 2 chr10 103688431 103688915 -41900373 - HERVI LTR ERV1 -3962 2687 546 888 242 36 18 chr10 103689069 103689350 -41899938 - HERVI LTR ERV1 -6360 289 4 2617 158 19 54 chr10 103689351 103689940 -41899348 - LTR10A LTR ERV1 -21 612 1 402 289 20 26 chr10 103690017 103690169 -41899119 - MIR SINE MIR -105 157 7 361 301 63 14 chr10 103690178 103690321 -41898967 + L2 LINE L2 3162 3311 -2 551 298 87 25 chr10 103690616 103690858 -41898430 - MIR SINE MIR -4 258 2 2190 172 92 8 chr10 103691036 103691535 -41897753 - LTR1B LTR ERV1 -1 825 285 21 82 0 0 chr10 103691566 103691615 -41897673 + AT_rich Low_complexity Low_complexity 1 49 0 1260 274 77 16 chr10 103691639 103692343 -41896945 + L1MEc LINE L1 484 1230 -5166 2597 46 0 0 chr10 103692396 103692700 -41896588 + AluY SINE Alu 1 304 -7 3894 205 27 15 chr10 103692743 103694100 -41895188 + L1M1 LINE L1 3220 4592 -2973 25 0 0 0 chr10 103694245 103694270 -41895018 + AT_rich Low_complexity Low_complexity 1 25 0 4802 194 10 4 chr10 103694275 103695299 -41893989 + L1M1 LINE L1 4598 5627 -1938 2358 118 3 0 chr10 103695299 103695656 -41893632 - L1PB1 LINE L1 0 6151 5794 546 16 0 0 chr10 103695657 103695720 -41893568 + (TA)n Simple_repeat Simple_repeat 2 64 0 4748 97 11 1 chr10 103695823 103696555 -41892733 + L1PA3 LINE L1 2103 2841 -3305 33795 113 7 15 chr10 103696566 103702013 -41887275 + L1PA6 LINE L1 11 5419 -750 2335 78 0 34 chr10 103702013 103702333 -41886955 + AluY SINE Alu 1 309 -2 33795 113 7 15 chr10 103702333 103703079 -41886209 + L1PA6 LINE L1 5419 6169 0 13301 109 5 22 chr10 103703122 103703475 -41885813 + L1PA3 LINE L1 2827 3185 -2961 7680 28 0 0 chr10 103703475 103704923 -41884365 + L1PA3 LINE L1 4705 6152 -3 13301 109 5 22 chr10 103704923 103705634 -41883654 + L1PA3 LINE L1 3185 3907 -2239 1741 177 0 3 chr10 103705634 103705936 -41883352 + AluSg SINE Alu 1 301 0 13301 109 5 22 chr10 103705936 103706977 -41882311 + L1PA3 LINE L1 3907 4898 -1248 2484 198 9 13 chr10 103706983 103707514 -41881774 + L1PB4 LINE L1 5617 6145 -11 353 287 0 0 chr10 103707623 103707717 -41881571 + L1ME3A LINE L1 6069 6162 -8 1786 245 63 14 chr10 103707742 103708767 -41880521 + L1MEc LINE L1 1280 2268 -3947 763 307 32 5 chr10 103708773 103709177 -41880111 + L1MEc LINE L1 3262 3676 -2539 402 294 49 86 chr10 103709333 103709578 -41879710 - HAL1 LINE L1 -2162 345 110 3916 97 8 6 chr10 103710840 103712086 -41877202 + L1PA8 LINE L1 4764 6183 0 187 231 96 0 chr10 103712118 103712170 -41877118 + MIR SINE MIR 132 188 -74 318 352 70 15 chr10 103712261 103712462 -41876826 + MIR SINE MIR 37 250 -12 243 0 0 0 chr10 103712484 103712511 -41876777 + (TA)n Simple_repeat Simple_repeat 1 27 0 7187 181 2 12 chr10 103713542 103715610 -41873678 + L1P5 LINE L1 3803 5850 -370 324 0 0 0 chr10 103715610 103715646 -41873642 + (TA)n Simple_repeat Simple_repeat 1 36 0 1288 97 11 11 chr10 103715801 103715986 -41873302 + AluY SINE Alu 111 295 -16 11840 129 6 42 chr10 103715986 103718148 -41871140 - L1P3 LINE L1 -4309 2152 9 7537 249 32 28 chr10 103718153 103718772 -41870516 - L1PBb LINE L1 -1748 4455 3840 3341 156 37 16 chr10 103718772 103719399 -41869889 - L1PA16 LINE L1 -4 6162 5523 7537 249 32 28 chr10 103719399 103721062 -41868226 - L1PBb LINE L1 -2363 3840 2055 2116 124 3 0 chr10 103721062 103721353 -41867935 + AluSp SINE Alu 1 292 -21 7537 249 32 28 chr10 103721353 103722462 -41866826 - L1PBb LINE L1 -4148 2055 952 341 243 0 0 chr10 103722482 103722552 -41866736 + MER75B DNA T2_type 1 70 -173 1207 118 11 0 chr10 103722977 103723164 -41866124 + MER75B DNA T2_type 53 241 -2 883 225 5 0 chr10 103723195 103723398 -41865890 - L1PBb LINE L1 -5299 905 695 4829 262 38 19 chr10 103723401 103725258 -41864030 - L1PA15-16 LINE L1 -5298 1551 1 997 276 81 26 chr10 103725288 103725867 -41863421 - L1ME3A LINE L1 -220 5950 5340 1242 305 52 16 chr10 103725970 103726580 -41862708 - L1MC4 LINE L1 -151 7891 7260 2712 142 128 10 chr10 103726580 103727087 -41862201 + MER49 LTR ERV1 1 567 -356 285 276 0 0 chr10 103728321 103728397 -41860891 + (TGGA)n Simple_repeat Simple_repeat 4 79 0 198 289 0 0 chr10 103730038 103730083 -41859205 - MIR SINE MIR -68 140 96 663 281 58 46 chr10 103730477 103730975 -41858313 + L1MC4 LINE L1 7142 7645 -397 21 36 0 0 chr10 103731370 103731398 -41857890 + AT_rich Low_complexity Low_complexity 1 28 0 311 326 48 7 chr10 103731817 103731964 -41857324 + L1M4 LINE L1 3614 3766 -2380 329 257 7 15 chr10 103732012 103732148 -41857140 + L1M4 LINE L1 3890 4024 -2122 2907 9 0 0 chr10 103732411 103732727 -41856561 + AluYb8 SINE Alu 1 316 -2 693 296 56 41 chr10 103732974 103733603 -41855685 + L1M4 LINE L1 4027 4664 -1482 399 240 33 103 chr10 103734431 103734645 -41854643 - HAL1 LINE L1 -99 2408 2219 207 114 0 0 chr10 103734645 103734680 -41854608 + (CA)n Simple_repeat Simple_repeat 2 36 0 399 240 33 103 chr10 103734680 103734765 -41854523 - HAL1 LINE L1 -288 2219 2130 297 75 0 0 chr10 103734776 103734816 -41854472 + (CA)n Simple_repeat Simple_repeat 1 40 0 236 340 59 7 chr10 103735038 103735191 -41854097 - HAL1 LINE L1 -723 1784 1624 498 279 19 0 chr10 103735212 103735370 -41853918 - HAL1 LINE L1 -996 1511 1351 306 375 70 27 chr10 103735425 103735684 -41853604 - HAL1 LINE L1 -1860 647 378 1666 232 26 5 chr10 103737148 103737536 -41851752 - MSTD LTR MaLR 0 396 1 186 43 0 0 chr10 103737660 103737683 -41851605 + (A)n Simple_repeat Simple_repeat 1 23 0 1921 175 82 25 chr10 103737790 103738195 -41851093 + MSTA LTR MaLR 1 428 0 254 287 0 39 chr10 103738650 103738779 -41850509 + L1 LINE L1 3443 3566 -2580 336 360 75 88 chr10 103738804 103739190 -41850098 - L1M2 LINE L1 -6452 397 17 879 332 17 29 chr10 103739190 103739641 -41849647 - L1PBa LINE L1 -5415 1447 1102 1672 211 26 9 chr10 103739679 103740100 -41849188 + L1P LINE L1 4936 5363 -783 10100 185 163 34 chr10 103740106 103742492 -41846796 + L1 LINE L1 15 2707 -4858 551 152 10 0 chr10 103742490 103742589 -41846699 - L1P LINE L1 -1074 5072 4973 * 6682 206 24 3 chr10 103742590 103744117 -41845171 + L1 LINE L1 4267 5825 -1740 5844 60 1 0 chr10 103744119 103744852 -41844436 + L1PA8 LINE L1 5434 6167 -5 511 274 14 33 chr10 103744855 103745067 -41844221 + L1MB5 LINE L1 3958 4165 -1981 1690 271 23 18 chr10 103745107 103745713 -41843575 + L1M4 LINE L1 3777 4385 -1761 2895 238 70 41 chr10 103745880 103746083 -41843205 + L1MB5 LINE L1 4320 4516 -1658 556 65 0 0 chr10 103746083 103746160 -41843128 + L1PA3 LINE L1 6074 6150 -5 2895 238 70 41 chr10 103746160 103746952 -41842336 + L1MB5 LINE L1 4516 5284 -890 1551 210 0 10 chr10 103746952 103747266 -41842022 + AluJo SINE Alu 1 311 -1 2895 238 70 41 chr10 103747266 103747968 -41841320 + L1MB5 LINE L1 5284 6083 -91 2127 177 68 7 chr10 103747968 103748426 -41840862 - MER66B LTR ERV1 0 486 1 2895 238 70 41 chr10 103748426 103748520 -41840768 + L1MB5 LINE L1 6083 6173 -1 1216 239 52 24 chr10 103748506 103748875 -41840413 + L1M4 LINE L1 4537 4915 -1231 * 40233 61 4 1 chr10 103749795 103755729 -41833559 - L1PA5 LINE L1 -7 6147 193 45 0 0 0 chr10 103756111 103756156 -41833132 + AT_rich Low_complexity Low_complexity 1 45 0 315 0 0 0 chr10 103757264 103757299 -41831989 + (GA)n Simple_repeat Simple_repeat 1 35 0 * 324 0 0 0 chr10 103757298 103757334 -41831954 + (TG)n Simple_repeat Simple_repeat 2 37 0 329 320 53 10 chr10 103758997 103759209 -41830079 - MIR SINE MIR -4 258 38 260 333 10 0 chr10 103759308 103759404 -41829884 - MER5B DNA MER1_type -81 97 1 2282 102 0 10 chr10 103759923 103760237 -41829051 + AluY SINE Alu 1 311 0 311 271 56 19 chr10 103760741 103760848 -41828440 - MER5B DNA MER1_type -67 111 1 191 175 18 0 chr10 103761129 103761186 -41828102 + (TA)n Simple_repeat Simple_repeat 2 59 0 224 162 44 15 chr10 103761311 103761379 -41827909 + (TA)n Simple_repeat Simple_repeat 2 71 0 258 371 31 3 chr10 103761408 103761545 -41827743 - MIR SINE MIR -64 144 13 305 300 20 0 chr10 103762324 103762424 -41826864 - MIR SINE MIR -112 150 49 215 323 87 43 chr10 103762838 103762999 -41826289 - MIR3 SINE MIR 0 208 41 4597 211 44 28 chr10 103763152 103764530 -41824758 - L1MC2 LINE L1 -9 6335 4940 996 168 10 0 chr10 103764542 103764739 -41824549 + L1 LINE L1 5133 5331 -815 1197 243 19 0 chr10 103764758 103765071 -41824217 - L1 LINE L1 -1024 5122 4804 1788 137 38 0 chr10 103765163 103765477 -41823811 - L1MA2 LINE L1 0 6304 5979 235 98 118 0 chr10 103765495 103765546 -41823742 + L1MA1 LINE L1 5964 6020 -282 4686 163 10 8 chr10 103765552 103767159 -41822129 - L1MA2 LINE L1 -345 5959 4349 466 149 0 0 chr10 103767483 103767584 -41821704 + AluSg/x SINE Alu 208 308 0 655 241 6 29 chr10 103767689 103767859 -41821429 + MER3 DNA MER1_type 44 209 0 453 315 78 16 chr10 103767901 103768209 -41821079 + MER46C DNA MER2_type 11 337 -1 1847 239 5 2 chr10 103768600 103769002 -41820286 + MER57A LTR ERV1 1 403 0 2929 243 19 52 chr10 103769003 103769826 -41819462 + MER57A-int LTR ERV1 2 797 -6740 5260 225 27 20 chr10 103769881 103771030 -41818258 + L1M1 LINE L1 126 1282 -6283 785 227 13 26 chr10 103771090 103771319 -41817969 + MER57-int LTR ERV1 5595 5820 -1717 1946 269 35 7 chr10 103771629 103772201 -41817087 + MER57-int LTR ERV1 5825 6412 -1125 1368 264 106 19 chr10 103772201 103772766 -41816522 + MER57-int LTR ERV1 6564 7177 -360 4515 167 31 4 chr10 103772789 103773614 -41815674 - L1PA16 LINE L1 0 6166 5319 876 144 56 6 chr10 103773626 103773806 -41815482 - L1MA7 LINE L1 -1 6290 6102 182 37 37 0 chr10 103774357 103774384 -41814904 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 657 240 58 0 chr10 103774406 103774577 -41814711 - MIR SINE MIR 0 262 82 10139 67 1 0 chr10 103775104 103777188 -41812100 - L1PA6 LINE L1 -2 6152 4065 4572 231 25 18 chr10 103777191 103778493 -41810795 - L1 LINE L1 -835 5311 4001 473 220 34 0 chr10 103778493 103778611 -41810677 + LTR54B LTR ERV1 8 129 -369 12828 182 89 38 chr10 103778663 103781553 -41807735 + L1M4 LINE L1 9 3136 -4429 * 42210 39 23 1 chr10 103781552 103787444 -41801844 - L1PA3 LINE L1 -134 6021 1 2274 99 3 3 chr10 103787446 103787750 -41801538 - AluY SINE Alu -7 304 1 2991 169 21 31 chr10 103787751 103788671 -41800617 + L1M4 LINE L1 3119 4019 -3546 769 172 8 22 chr10 103788671 103788805 -41800483 + FLAM_C SINE Alu 1 132 -1 240 35 0 0 chr10 103788823 103788852 -41800436 + (GGGAA)n Simple_repeat Simple_repeat 5 33 0 5324 218 23 10 chr10 103788864 103790131 -41799157 - L1 LINE L1 -2235 3911 2629 6037 39 5 1 chr10 103790248 103790990 -41798298 + L1PA3 LINE L1 5406 6150 -5 912 285 97 38 chr10 103791072 103791325 -41797963 + L1M4 LINE L1 5027 5263 -2302 3671 186 40 15 chr10 103791325 103792122 -41797166 + L1MA6 LINE L1 5484 6300 0 912 285 97 38 chr10 103792122 103792936 -41796352 + L1M4 LINE L1 5263 6158 -1407 3322 216 29 16 chr10 103793322 103794414 -41794874 + L1MB8 LINE L1 4462 5569 -615 2419 208 21 5 chr10 103794481 103795062 -41794226 + L1MB8 LINE L1 5584 6173 -5 21480 88 10 7 chr10 103795944 103802064 -41787224 - L1PA6 LINE L1 -13 6141 11 1447 215 117 20 chr10 103802472 103802961 -41786327 + LTR64 LTR ERVK 23 558 0 21 36 0 0 chr10 103803223 103803251 -41786037 + AT_rich Low_complexity Low_complexity 1 28 0 237 110 55 41 chr10 103803492 103803565 -41785723 + (TTTA)n Simple_repeat Simple_repeat 1 74 0 11606 162 21 21 chr10 103803571 103807151 -41782137 - L1MA1 LINE L1 -7 6295 2716 32 43 0 0 chr10 103807314 103807360 -41781928 + AT_rich Low_complexity Low_complexity 1 46 0 267 312 30 13 chr10 103807517 103807631 -41781657 - MIR SINE MIR -46 162 49 259 305 25 51 chr10 103808047 103808165 -41781123 - MIR3 SINE MIR -1 207 93 6313 147 28 1 chr10 103808331 103810205 -41779083 - L1PA10 LINE L1 0 6483 4563 8850 200 19 38 chr10 103810209 103813422 -41775866 - L1PA10 LINE L1 -3267 3194 2 2937 189 12 15 chr10 103813600 103814252 -41775036 - L1PA12 LINE L1 -4792 2789 2140 827 149 5 48 chr10 103814411 103814619 -41774669 - LTR9-int LTR ERV1 -3671 4145 3947 * 4047 186 8 5 chr10 103814618 103815369 -41773919 - LTR9-int LTR ERV1 -1950 6969 6217 30644 135 20 7 chr10 103815374 103819484 -41769804 - LTR9-int LTR ERV1 -2849 6070 2012 1858 130 137 6 chr10 103819484 103819806 -41769482 + THE1B LTR MaLR 1 364 0 10794 129 7 4 chr10 103819806 103821382 -41767906 + THE1B-int LTR MaLR 1 1580 0 2076 116 47 47 chr10 103821384 103821746 -41767542 + THE1B LTR MaLR 3 364 0 30644 135 20 7 chr10 103821746 103822580 -41766708 - LTR9-int LTR ERV1 -6907 2012 1061 1727 43 0 4 chr10 103822580 103822891 -41766397 - L1P2 LINE L1 -681 5473 5164 4188 50 30 7 chr10 103822891 103823427 -41765861 + L1PA5 LINE L1 5593 6141 -13 4173 181 24 67 chr10 103823453 103824545 -41764743 - LTR9-int LTR ERV1 -6351 1067 23 2480 190 19 62 chr10 103824579 103825206 -41764082 - LTR9 LTR ERV1 -12 600 1 465 261 19 6 chr10 103825206 103825367 -41763921 - L1M2 LINE L1 -3412 2734 2572 250 265 30 0 chr10 103825390 103825491 -41763797 - L1M2 LINE L1 -904 1798 1503 328 314 25 0 chr10 103825859 103825977 -41763311 - L1MDa LINE L1 -5163 1377 1257 565 277 0 0 chr10 103826105 103826235 -41763053 - FLAM_A SINE Alu -11 131 2 296 322 7 0 chr10 103826289 103826441 -41762847 - L1ME3 LINE L1 -8 6154 6002 3717 118 79 45 chr10 103826538 103831924 -41757364 + L1PA7 LINE L1 12 5215 -939 3717 75 52 0 chr10 103831924 103831998 -41757290 + L1PA7 LINE L1 5607 5676 -478 279 0 0 0 chr10 103831998 103832029 -41757259 + (CA)n Simple_repeat Simple_repeat 2 32 0 3717 75 52 0 chr10 103832029 103832475 -41756813 + L1PA7 LINE L1 5676 6154 0 * 5853 107 12 25 chr10 103832448 103833626 -41755662 + L1PA11 LINE L1 5006 6174 0 3717 118 79 45 chr10 103832475 103833694 -41755594 + L1PA7 LINE L1 5215 6154 0 1767 218 43 31 chr10 103834143 103834726 -41754562 - L1MB3 LINE L1 0 6183 5594 1413 181 30 30 chr10 103835131 103835409 -41753879 + L1MB3 LINE L1 5833 6113 -70 1685 143 94 34 chr10 103835409 103835760 -41753528 - THE1C LTR MaLR 0 375 4 1413 181 30 30 chr10 103835760 103835819 -41753469 + L1MB3 LINE L1 6112 6170 -13 353 298 56 51 chr10 103835848 103835995 -41753293 + MIR SINE MIR 6 156 -106 1559 203 126 49 chr10 103835995 103836464 -41752824 + MLT1D LTR MaLR 1 505 0 353 298 56 51 chr10 103836464 103836531 -41752757 + MIR SINE MIR 156 221 -41 202 312 52 13 chr10 103836561 103836638 -41752650 - L2 LINE L2 -210 3103 3024 22 35 0 0 chr10 103836729 103836758 -41752530 + AT_rich Low_complexity Low_complexity 1 29 0 277 318 18 0 chr10 103837219 103837329 -41751959 + (TATATG)n Simple_repeat Simple_repeat 4 115 0 41192 45 1 2 chr10 103838307 103844465 -41744823 + L1PA3 LINE L1 13 6165 0 20546 37 6 3 chr10 103844638 103847958 -41741330 + L1PA4 LINE L1 2827 6142 -13 13440 89 11 9 chr10 103847994 103850861 -41738427 + L1PA6 LINE L1 3288 6158 0 564 141 22 0 chr10 103850861 103850953 -41738335 - MLT2B2 LTR ERVL -421 94 1 2516 185 35 10 chr10 103851463 103851755 -41737533 - L1MD1 LINE L1 -21 6221 5930 333 340 51 32 chr10 103851755 103852008 -41737280 - L1MA4 LINE L1 -373 5927 5670 1989 73 0 0 chr10 103852238 103852485 -41736803 - L1P2 LINE L1 -391 5763 5517 * 13459 82 6 4 chr10 103852480 103854315 -41734973 - L1P2 LINE L1 -1236 4910 3072 3610 49 5 0 chr10 103854346 103854773 -41734515 - L1PA4 LINE L1 -1 6154 5726 7595 52 20 0 chr10 103854773 103856492 -41732796 + L1PA5 LINE L1 4446 6154 0 546 88 0 25 chr10 103856520 103856600 -41732688 + MER9 LTR ERVK 358 435 -76 11382 90 8 0 chr10 103856614 103858881 -41730407 + L1PA7 LINE L1 3867 6154 0 1377 194 57 18 chr10 103858957 103859236 -41730052 - AluJo SINE Alu -8 304 15 211 118 0 39 chr10 103859479 103859530 -41729758 + (GGGGA)n Simple_repeat Simple_repeat 1 49 0 397 301 77 59 chr10 103860055 103860494 -41728794 + L1M4 LINE L1 2470 2916 -3230 404 268 62 70 chr10 103861030 103861302 -41727986 + MER113 DNA MER1_type? 92 361 -160 220 286 16 0 chr10 103861494 103861557 -41727731 + MIR SINE MIR 38 101 -161 738 248 102 20 chr10 103862675 103862969 -41726319 + MLT1I LTR MaLR 82 399 -10 499 259 85 49 chr10 103863022 103863246 -41726042 + MIR SINE MIR 21 252 -10 13641 30 4 1 chr10 103864179 103866498 -41722790 - L1PA4 LINE L1 0 6155 3840 305 301 26 7 chr10 103866597 103866750 -41722538 + MIR SINE MIR 53 208 -54 266 282 32 57 chr10 103866854 103866978 -41722310 + L2 LINE L2 3193 3313 0 659 268 22 6 chr10 103866983 103867162 -41722126 + MIR SINE MIR 31 212 -50 996 42 0 0 chr10 103867932 103868050 -41721238 + L1PA4 LINE L1 6035 6152 -3 2213 78 7 7 chr10 103868085 103868369 -41720919 + L1PB1 LINE L1 5864 6147 -4 1993 150 84 15 chr10 103868376 103868770 -41720518 + MER65A LTR ERV1 21 441 -4 570 244 40 87 chr10 103868863 103869138 -41720150 + MER65A-int LTR ERV1 89 350 -4521 6667 195 70 59 chr10 103869242 103870599 -41718689 + MER65A-int LTR ERV1 597 1984 -2887 187 53 26 26 chr10 103870599 103870637 -41718651 + (TTTTA)n Simple_repeat Simple_repeat 3 40 0 6667 195 70 59 chr10 103870637 103871155 -41718133 + MER65A-int LTR ERV1 1984 2494 -2377 1698 182 7 3 chr10 103871206 103871503 -41717785 + AluJo SINE Alu 5 302 -10 22 0 0 0 chr10 103871514 103871536 -41717752 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr10 103871640 103871668 -41717620 + AT_rich Low_complexity Low_complexity 1 28 0 2002 116 0 4 chr10 103871668 103871935 -41717353 + AluSx SINE Alu 23 288 -24 711 146 52 108 chr10 103871941 103872209 -41717079 + MER31-int LTR ERV1 1641 1893 -6227 335 146 56 139 chr10 103872213 103872357 -41716931 + MER31-int LTR ERV1 3350 3481 -3117 787 157 10 66 chr10 103872621 103872818 -41716470 + MER31-int LTR ERV1 3545 3730 -2868 268 107 0 36 chr10 103872898 103872954 -41716334 + MER31-int LTR ERV1 3730 3783 -2815 572 232 112 80 chr10 103873030 103873379 -41715909 + MER31-int LTR ERV1 2679 3038 -1898 1044 200 119 47 chr10 103873421 103873741 -41715547 + MER31-int LTR ERV1 4304 4646 -1685 367 227 0 7 chr10 103873747 103873841 -41715447 + L1PB4 LINE L1 6076 6166 0 907 234 121 23 chr10 103873892 103874309 -41714979 + MER31-int LTR ERV1 2853 3970 -966 23 0 0 0 chr10 103874809 103874832 -41714456 + GC_rich Low_complexity Low_complexity 1 23 0 1694 104 4 8 chr10 103875380 103875629 -41713659 + AluSx SINE Alu 49 296 -16 2966 174 28 2 chr10 103876399 103877360 -41711928 + L1MB8 LINE L1 4800 5791 -509 478 186 0 0 chr10 103877374 103877460 -41711828 + L1MB8 LINE L1 6087 6172 -6 1140 169 51 7 chr10 103878412 103878675 -41710613 - L1PA16 LINE L1 -2 6161 5863 538 233 45 51 chr10 103881417 103881593 -41707695 - L1ME1 LINE L1 -91 6075 5901 * 3078 166 37 13 chr10 103881573 103882199 -41707089 + L1 LINE L1 3847 4487 -1659 976 298 108 29 chr10 103883160 103883515 -41705773 + MLT1J LTR MaLR 1 395 -116 2498 149 111 102 chr10 103883515 103883744 -41705544 + MLT2B3 LTR ERVL 1 226 -328 234 0 0 0 chr10 103883744 103883770 -41705518 + (TG)n Simple_repeat Simple_repeat 2 27 0 2498 149 111 102 chr10 103883770 103884089 -41705199 + MLT2B3 LTR ERVL 226 554 0 976 298 108 29 chr10 103884089 103884149 -41705139 + MLT1J LTR MaLR 395 449 -62 234 0 0 0 chr10 103884756 103884782 -41704506 + (A)n Simple_repeat Simple_repeat 1 26 0 773 326 4 4 chr10 103885735 103885993 -41703295 + MIR SINE MIR 5 262 0 233 313 152 25 chr10 103886193 103886391 -41702897 - L2 LINE L2 -214 3058 2836 287 243 40 14 chr10 103886457 103886531 -41702757 + MIR SINE MIR 78 153 -55 196 290 29 29 chr10 103887331 103887400 -41701888 - MIR3 SINE MIR -1 207 139 415 296 106 54 chr10 103887739 103888107 -41701181 - L1ME1 LINE L1 -277 5844 5458 3569 195 21 80 chr10 103888125 103889154 -41700134 - LTR5 LTR ERVK 0 969 1 2115 109 10 3 chr10 103889302 103889596 -41699692 + AluSx SINE Alu 3 298 -14 7611 31 5 0 chr10 103889796 103891561 -41697727 + L1PA4 LINE L1 4503 6275 0 312 294 5 29 chr10 103891614 103891822 -41697466 + GA-rich Low_complexity Low_complexity 1 202 0 3241 144 32 4 chr10 103892116 103892617 -41696671 - L1PB4 LINE L1 -14 6142 5628 405 269 126 0 chr10 103893263 103893382 -41695906 + MIR SINE MIR 46 179 -83 262 150 22 0 chr10 103893519 103893565 -41695723 + MIR SINE MIR 103 150 -58 1783 159 3 51 chr10 103893574 103893888 -41695400 + AluSx SINE Alu 3 301 -11 3595 117 14 0 chr10 103893928 103894415 -41694873 + MER1A DNA MER1_type 36 529 0 225 0 0 0 chr10 103894788 103894813 -41694475 + (A)n Simple_repeat Simple_repeat 1 25 0 404 292 102 71 chr10 103895105 103895201 -41694087 + L1M4 LINE L1 4753 4845 -1301 2123 96 3 17 chr10 103895201 103895494 -41693794 + AluSx SINE Alu 1 289 -23 404 292 102 71 chr10 103895494 103895818 -41693470 + L1M4 LINE L1 4845 5186 -960 1901 201 45 11 chr10 103896188 103896541 -41692747 - MLT1A1 LTR MaLR 0 365 1 184 366 16 32 chr10 103896817 103896927 -41692361 + MIR3 SINE MIR 86 195 -13 2487 169 29 15 chr10 103896927 103897383 -41691905 - L1MB7 LINE L1 -15 6169 5708 184 366 16 32 chr10 103897383 103897395 -41691893 + MIR3 SINE MIR 195 206 -2 239 114 68 0 chr10 103898715 103898759 -41690529 + L1PA8A LINE L1 5786 5832 -299 2325 90 0 0 chr10 103898799 103899087 -41690201 + AluSx SINE Alu 11 298 -14 2183 119 9 24 chr10 103899089 103899417 -41689871 + L1PB4 LINE L1 5830 6152 -4 1881 145 116 0 chr10 103899497 103899800 -41689488 + MER44D DNA MER2_type 1 608 -1 234 0 0 0 chr10 103899865 103899891 -41689397 + (A)n Simple_repeat Simple_repeat 1 26 0 781 298 105 22 chr10 103899891 103900503 -41688785 - L2 LINE L2 -71 3242 2564 449 224 8 52 chr10 103900504 103900638 -41688650 + MER96B DNA MER1_type? 1 128 -289 41 87 0 0 chr10 103900666 103900770 -41688518 + AT_rich Low_complexity Low_complexity 1 104 0 287 125 0 0 chr10 103900794 103900834 -41688454 + MER58A DNA MER1_type 37 76 -31 878 199 0 22 chr10 103900981 103901162 -41688126 - MER96B DNA MER1_type? -240 177 1 198 284 10 129 chr10 103901164 103901365 -41687923 - L2 LINE L2 -746 2568 2392 217 203 0 31 chr10 103902511 103902575 -41686713 + (TTAA)n Simple_repeat Simple_repeat 3 64 0 319 266 243 35 chr10 103903264 103903433 -41685855 - MIR SINE MIR -52 210 7 529 407 83 10 chr10 103906009 103906611 -41682677 - L2 LINE L2 -1747 1567 922 1572 198 8 78 chr10 103906619 103906855 -41682433 - MLT1A2 LTR MaLR 0 374 174 1229 220 7 42 chr10 103906855 103907164 -41682124 - AluJo SINE Alu -13 299 2 1572 198 8 78 chr10 103907164 103907310 -41681978 - MLT1A2 LTR MaLR -200 174 19 486 366 78 26 chr10 103907321 103907744 -41681544 - L2 LINE L2 -2565 749 305 2362 91 3 3 chr10 103907999 103908307 -41680981 + AluSc SINE Alu 1 308 -1 235 286 0 0 chr10 103909240 103909310 -41679978 - MLT1K LTR MaLR -4 584 515 186 385 0 0 chr10 103909863 103909928 -41679360 - L2 LINE L2 -39 3233 3169 270 200 0 0 chr10 103909929 103909974 -41679314 + Alu SINE Alu 1 45 -257 862 234 149 44 chr10 103910257 103910782 -41678506 - L1MC5 LINE L1 -196 7765 7186 314 318 95 0 chr10 103911747 103911873 -41677415 - L1M4 LINE L1 -2196 3950 3813 982 206 43 73 chr10 103912011 103912236 -41677052 + L1 LINE L1 3148 3355 -2791 2128 132 3 0 chr10 103912236 103912540 -41676748 + AluSq SINE Alu 1 305 -8 982 206 43 73 chr10 103912540 103912736 -41676552 + L1 LINE L1 3355 3556 -2590 * 2393 159 19 68 chr10 103912728 103913270 -41676018 + L1 LINE L1 3866 4380 -1766 2188 117 3 0 chr10 103913272 103913570 -41675718 + AluSx SINE Alu 1 299 -13 1668 219 26 28 chr10 103913570 103913958 -41675330 + L1MA10 LINE L1 5942 6328 -6 357 62 0 0 chr10 103914075 103914123 -41675165 + (CA)n Simple_repeat Simple_repeat 2 49 0 2915 210 65 32 chr10 103914123 103914985 -41674303 + L1M4 LINE L1 3503 4392 -1754 367 315 87 42 chr10 103915018 103915307 -41673981 + MARNA DNA Mariner 271 572 -14 2244 65 61 0 chr10 103915354 103915631 -41673657 - AluSp SINE Alu -19 294 1 521 284 96 23 chr10 103915849 103916067 -41673221 - MIR SINE MIR -27 235 2 1820 252 87 32 chr10 103916475 103917218 -41672070 - L1MC4 LINE L1 -71 7971 7177 1808 169 0 26 chr10 103917218 103917526 -41671762 + AluJb SINE Alu 1 300 -12 1820 252 87 32 chr10 103917526 103917614 -41671674 - L1MC4 LINE L1 -865 7177 7095 643 239 147 48 chr10 103917665 103917920 -41671368 - L1ME4a LINE L1 -4 6117 5889 2013 122 42 0 chr10 103917920 103918206 -41671082 - AluSx SINE Alu -14 298 1 643 239 147 48 chr10 103918206 103918432 -41670856 - L1ME4a LINE L1 -232 5889 5588 2094 105 7 20 chr10 103918717 103919021 -41670267 + AluSx SINE Alu 1 300 -12 313 357 29 12 chr10 103919236 103919407 -41669881 - MIR SINE MIR 0 262 89 230 260 82 0 chr10 103919950 103920023 -41669265 - L1ME LINE L1 -228 5893 5815 382 229 49 66 chr10 103920046 103920071 -41669217 - L1ME3 LINE L1 -32 6130 6106 2729 80 128 5 chr10 103920071 103920470 -41668818 + LTR7 LTR ERV1 1 448 -2 382 229 49 66 chr10 103920470 103920566 -41668722 - L1ME3 LINE L1 -56 6106 6011 259 224 52 0 chr10 103920764 103920822 -41668466 - L1MC4a LINE L1 -1104 6704 6644 1212 213 34 8 chr10 103920998 103921261 -41668027 - L1ME3 LINE L1 -166 5996 5727 3694 58 0 7 chr10 103922123 103922574 -41666714 + LTR7 LTR ERV1 1 448 -2 1967 104 40 27 chr10 103922807 103923106 -41666182 - AluSq SINE Alu -10 303 1 529 234 23 23 chr10 103923171 103923299 -41665989 - MIR SINE MIR -107 155 28 1156 350 51 17 chr10 103923432 103924200 -41665088 - HERVL LTR ERVL -832 4822 4029 576 288 50 37 chr10 103924242 103924565 -41664723 - HERVL LTR ERVL -1342 3654 3328 440 302 97 18 chr10 103924679 103925052 -41664236 - HERVL LTR ERVL -2024 3461 3048 453 138 0 38 chr10 103925102 103925182 -41664106 + MER33 DNA MER1_type 2 78 -246 * 607 159 18 112 chr10 103925171 103925223 -41664065 + MER33 DNA MER1_type 210 265 -2359 1825 163 24 3 chr10 103925223 103925518 -41663770 + AluJo SINE Alu 1 301 -11 2385 89 0 0 chr10 103925526 103925819 -41663469 + AluSg SINE Alu 1 293 -17 607 159 18 112 chr10 103925819 103925927 -41663361 + MER33 DNA MER1_type 272 363 0 195 258 32 97 chr10 103925936 103926029 -41663259 - L2 LINE L2 -2 3270 3184 257 272 44 89 chr10 103926120 103926278 -41663010 - L2 LINE L2 -181 3091 2941 2378 113 0 0 chr10 103926480 103926790 -41662498 - AluSx SINE Alu -1 311 2 2411 67 0 3 chr10 103927987 103928286 -41661002 + AluY SINE Alu 1 298 -13 345 214 14 0 chr10 103929737 103929807 -41659481 + MIR SINE MIR 81 151 -57 6874 83 12 9 chr10 103929816 103930444 -41658844 + L1PA11 LINE L1 4659 5283 -891 2188 128 0 0 chr10 103930444 103930741 -41658547 + AluSx SINE Alu 1 297 -15 6874 83 12 9 chr10 103930741 103931603 -41657685 + L1PA11 LINE L1 5283 6171 -3 768 149 82 0 chr10 103931838 103931972 -41657316 - MER5A DNA MER1_type -28 161 17 359 228 87 0 chr10 103932182 103932274 -41657014 - FLAM_A SINE Alu -1 132 33 1009 181 135 0 chr10 103932369 103932562 -41656726 + MER20 DNA MER1_type 1 219 0 545 154 49 105 chr10 103933222 103933334 -41655954 + MER96B DNA MER1_type? 264 366 -51 2193 79 31 7 chr10 103933334 103933625 -41655663 + AluSx SINE Alu 1 298 -14 545 154 49 105 chr10 103933625 103933674 -41655614 + MER96B DNA MER1_type? 366 416 -1 2409 167 19 9 chr10 103934631 103935056 -41654232 + L1MB3 LINE L1 5743 6171 -12 307 310 160 3 chr10 103935268 103935447 -41653841 - MIR SINE MIR -52 210 4 2114 140 0 0 chr10 103935548 103935855 -41653433 + AluSx SINE Alu 1 307 -5 416 275 43 77 chr10 103936083 103936290 -41652998 + MLT1J LTR MaLR 111 310 -201 215 342 140 9 chr10 103937282 103937396 -41651892 - MER91B DNA MER1_type -61 129 1 282 351 82 0 chr10 103937460 103937631 -41651657 - MIR SINE MIR -9 253 69 246 105 0 0 chr10 103937969 103938007 -41651281 + (TC)n Simple_repeat Simple_repeat 2 39 0 1653 171 7 17 chr10 103939179 103939478 -41649810 - AluJo SINE Alu -16 296 1 187 307 160 0 chr10 103939479 103939554 -41649734 + L2 LINE L2 2688 2774 -540 732 283 137 5 chr10 103939628 103940054 -41649234 + L2 LINE L2 2799 3275 -38 233 240 20 0 chr10 103940574 103940624 -41648664 + CT-rich Low_complexity Low_complexity 5 55 0 23 0 0 0 chr10 103941276 103941299 -41647989 + AT_rich Low_complexity Low_complexity 1 23 0 1204 156 71 19 chr10 103942235 103942447 -41646841 + AluSx SINE Alu 1 223 -89 8355 195 147 28 chr10 103942651 103944357 -41644931 + L1MDa LINE L1 28 2175 -4365 1631 142 0 4 chr10 103944357 103944604 -41644684 + AluSq SINE Alu 55 300 -13 8355 195 147 28 chr10 103944604 103945563 -41643725 + L1MDa LINE L1 2175 3018 -3522 1656 158 42 11 chr10 103945566 103945831 -41643457 + AluJb SINE Alu 2 274 -38 252 86 0 0 chr10 103945837 103945872 -41643416 + (TAAG)n Simple_repeat Simple_repeat 1 35 0 7856 180 28 36 chr10 103945873 103946830 -41642458 + L1MDa LINE L1 3681 4645 -1895 333 0 0 0 chr10 103946830 103946867 -41642421 + (CA)n Simple_repeat Simple_repeat 2 38 0 7856 180 28 36 chr10 103946867 103947619 -41641669 + L1MDa LINE L1 4645 5379 -1161 1789 173 0 11 chr10 103947619 103947970 -41641318 + AluSx SINE Alu 1 348 0 7856 180 28 36 chr10 103947970 103948040 -41641248 + L1MDa LINE L1 5379 5448 -1092 800 128 90 15 chr10 103948041 103948174 -41641114 + FLAM_C SINE Alu 1 143 0 3072 150 63 11 chr10 103948174 103948841 -41640447 + L1MB2 LINE L1 5454 6163 -402 2070 129 71 31 chr10 103948841 103949191 -41640097 - THE1B LTR MaLR 0 364 1 3072 150 63 11 chr10 103949191 103949251 -41640037 + L1MB2 LINE L1 6163 6218 -347 1380 103 0 29 chr10 103949251 103949455 -41639833 + AluSg/x SINE Alu 106 303 -6 1372 174 119 13 chr10 103949455 103949765 -41639523 + L1MB2 LINE L1 6222 6564 -1 2162 129 52 42 chr10 103949780 103950206 -41639082 + L1MD1 LINE L1 5807 6236 -6 786 279 8 11 chr10 103951021 103951251 -41638037 - MIR SINE MIR -3 259 30 233 100 0 50 chr10 103951395 103951435 -41637853 + L2 LINE L2 3267 3304 -9 2327 84 3 0 chr10 103952660 103952969 -41636319 + AluSp SINE Alu 1 310 -3 509 237 86 103 chr10 103953328 103953619 -41635669 + MER102b DNA MER1_type 55 340 -1 1925 132 0 7 chr10 103953798 103954094 -41635194 + AluJb SINE Alu 5 298 -14 334 305 69 0 chr10 103954544 103954675 -41634613 - MIR SINE MIR -17 245 106 2420 71 7 0 chr10 103956246 103956554 -41632734 + AluSp SINE Alu 1 310 -3 1405 167 53 7 chr10 103956566 103956848 -41632440 + AluJo SINE Alu 1 295 -17 1963 142 7 0 chr10 103956850 103957160 -41632128 + AluSx SINE Alu 1 312 0 274 248 202 8 chr10 103957450 103957579 -41631709 + MIR SINE MIR 91 244 -18 29 47 0 0 chr10 103958269 103958312 -41630976 + AT_rich Low_complexity Low_complexity 1 43 0 2377 88 0 0 chr10 103960223 103960530 -41628758 + AluSx SINE Alu 1 307 -5 3696 54 5 0 chr10 103960532 103960979 -41628309 + L1PA6 LINE L1 5483 5931 -223 1832 129 3 21 chr10 103961081 103961368 -41627920 - AluSx SINE Alu -30 282 1 2073 116 3 0 chr10 103962089 103962381 -41626907 - AluSx SINE Alu -19 293 1 2380 86 0 0 chr10 103962486 103962788 -41626500 + AluSx SINE Alu 1 302 -10 222 252 110 47 chr10 103962818 103962945 -41626343 - L2 LINE L2 -8 3305 3171 370 283 104 17 chr10 103963243 103963416 -41625872 - MIR SINE MIR 0 262 75 21 71 0 0 chr10 103963682 103963724 -41625564 + AT_rich Low_complexity Low_complexity 1 42 0 1873 128 54 7 chr10 103963727 103964024 -41625264 + AluSx SINE Alu 1 311 -1 254 220 119 0 chr10 103964817 103964876 -41624412 + MIR3 SINE MIR 138 203 -5 423 269 159 52 chr10 103965491 103965625 -41623663 + L2 LINE L2 2925 3043 -270 2273 69 3 13 chr10 103965625 103965928 -41623360 - AluSq SINE Alu -13 300 1 423 269 159 52 chr10 103965928 103966083 -41623205 + L2 LINE L2 3043 3245 -68 3349 128 98 40 chr10 103966083 103966760 -41622528 + LTR8A LTR ERV1 12 727 0 321 188 78 0 chr10 103966760 103966824 -41622464 + L2 LINE L2 3243 3311 -2 382 278 79 1 chr10 103967468 103967600 -41621688 - MIR SINE MIR -66 142 2 521 243 128 13 chr10 103967922 103968157 -41621131 - MIR SINE MIR 0 262 1 252 0 0 0 chr10 103968228 103968256 -41621032 + (A)n Simple_repeat Simple_repeat 1 28 0 1768 146 10 13 chr10 103968262 103968564 -41620724 + AluJb SINE Alu 1 301 -11 1728 118 0 78 chr10 103968669 103968965 -41620323 + AluSx SINE Alu 1 273 -39 216 0 0 0 chr10 103968972 103968996 -41620292 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 457 326 124 0 chr10 103969466 103969699 -41619589 + MIR SINE MIR 1 262 0 315 298 152 11 chr10 103969707 103969885 -41619403 - L2 LINE L2 -42 3230 3028 192 77 0 0 chr10 103969948 103969974 -41619314 + (GAAAA)n Simple_repeat Simple_repeat 4 29 0 673 306 83 0 chr10 103970322 103970574 -41618714 + Charlie8 DNA MER1_type 4 276 -2141 2053 110 7 3 chr10 103971425 103971724 -41617564 + AluSx SINE Alu 1 300 -12 288 316 34 40 chr10 103972216 103972393 -41616895 + MER5B DNA MER1_type 1 176 -2 1311 198 51 14 chr10 103972627 103972920 -41616368 + AluJo SINE Alu 1 304 -8 776 154 0 29 chr10 103972983 103973119 -41616169 - AluJo SINE Alu -176 136 5 2005 109 0 14 chr10 103973989 103974273 -41615015 + AluSx SINE Alu 1 280 -32 663 242 90 11 chr10 103974375 103974553 -41614735 + MIR SINE MIR 71 262 0 450 283 141 6 chr10 103974562 103974739 -41614549 - MIR SINE MIR -10 252 52 1550 262 86 19 chr10 103975040 103975313 -41613975 - L1ME3A LINE L1 -10 6160 5907 315 0 0 0 chr10 103975313 103975348 -41613940 + (TG)n Simple_repeat Simple_repeat 2 36 0 1550 262 86 19 chr10 103975348 103975609 -41613679 - L1ME3A LINE L1 -263 5907 5590 22 0 0 0 chr10 103975615 103975637 -41613651 + AT_rich Low_complexity Low_complexity 1 22 0 2153 116 0 0 chr10 103975691 103975985 -41613303 - AluSq SINE Alu -19 294 1 260 274 97 4 chr10 103976793 103976970 -41612318 + MIR SINE MIR 8 262 0 699 237 76 40 chr10 103976980 103977229 -41612059 + MIR SINE MIR 5 262 0 2002 121 0 0 chr10 103977418 103977700 -41611588 + AluSx SINE Alu 13 294 -18 198 281 146 11 chr10 103977797 103977886 -41611402 - MIR SINE MIR -78 130 30 209 355 121 0 chr10 103978048 103978189 -41611099 + MIR SINE MIR 66 223 -39 24 0 0 0 chr10 103978990 103979014 -41610274 + AT_rich Low_complexity Low_complexity 1 24 0 266 218 109 129 chr10 103979200 103979448 -41609840 + L1ME3A LINE L1 5839 6081 -89 230 350 130 0 chr10 103980166 103980266 -41609022 + L2 LINE L2 3140 3252 -20 206 207 17 17 chr10 103980280 103980338 -41608950 + (TAAA)n Simple_repeat Simple_repeat 4 61 0 28 29 0 0 chr10 103981977 103982012 -41607276 + GC_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr10 103982340 103982362 -41606926 + GC_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr10 103982510 103982534 -41606754 + AT_rich Low_complexity Low_complexity 1 24 0 240 281 18 53 chr10 103982557 103982671 -41606617 - L1MC4 LINE L1 -21 8021 7912 904 201 15 5 chr10 103982710 103982909 -41606379 - L1MC4 LINE L1 -144 7898 7698 1548 139 4 0 chr10 103982911 103983149 -41606139 - AluSx SINE Alu -14 298 60 1480 169 0 0 chr10 103983152 103983395 -41605893 - AluJb SINE Alu -69 243 1 753 199 84 38 chr10 103983395 103983657 -41605631 - L1MC4 LINE L1 -419 7623 7350 966 161 30 45 chr10 103983688 103983887 -41605401 + MLT1A1 LTR MaLR 1 196 -169 613 116 21 0 chr10 103983896 103983991 -41605297 + MLT1A1 LTR MaLR 300 396 0 1723 150 75 52 chr10 103983995 103984091 -41605197 + MLT1A1 LTR MaLR 12 104 -261 2300 85 10 0 chr10 103984091 103984397 -41604891 - AluSg SINE Alu 0 310 2 1723 150 75 52 chr10 103984397 103984646 -41604642 + MLT1A1 LTR MaLR 104 365 0 2094 248 57 40 chr10 103984651 103984960 -41604328 - L1MC4 LINE L1 -717 7325 7023 2186 101 3 3 chr10 103984960 103985267 -41604021 - AluSx SINE Alu -5 307 1 2094 248 57 40 chr10 103985267 103985675 -41603613 - L1MC4 LINE L1 -1019 7023 6596 503 280 33 20 chr10 103985675 103985825 -41603463 + L2 LINE L2 3160 3311 -2 920 285 106 35 chr10 103987111 103987479 -41601809 - LTR16A LTR ERVL 0 450 57 1590 171 4 0 chr10 103987607 103987881 -41601407 - AluJo SINE Alu -37 275 1 2317 80 3 0 chr10 103989482 103989783 -41599505 + AluSx SINE Alu 1 302 -10 558 267 92 18 chr10 103990015 103990294 -41598994 - L1MC4 LINE L1 -303 5818 5572 201 292 124 0 chr10 103990392 103990481 -41598807 - L2 LINE L2 -12 3301 3202 2297 75 3 3 chr10 103990775 103991080 -41598208 - AluSp SINE Alu -8 305 1 244 250 62 0 chr10 103991239 103991303 -41597985 - L2 LINE L2 -12 3260 3193 990 246 154 21 chr10 103991374 103991630 -41597658 - L2 LINE L2 -17 3296 3075 1662 152 13 29 chr10 103991630 103991939 -41597349 - AluJb SINE Alu -8 304 1 990 246 154 21 chr10 103991939 103992200 -41597088 - L2 LINE L2 -238 3075 2711 291 230 14 40 chr10 103992496 103992570 -41596718 + MIR SINE MIR 74 145 -63 917 258 208 26 chr10 103993903 103994572 -41594716 + L2 LINE L2 2504 3312 -1 329 220 94 28 chr10 103994872 103995071 -41594217 - L1MC/D LINE L1 -485 5636 5507 1937 91 0 0 chr10 103995307 103995560 -41593728 + AluSx SINE Alu 1 253 -59 302 299 120 40 chr10 103995632 103995906 -41593382 - MLT1K LTR MaLR -106 482 187 435 133 0 0 chr10 103995940 103996000 -41593288 + AluS SINE Alu 2 61 -257 349 284 23 0 chr10 103996813 103996901 -41592387 + Charlie1 DNA MER1_type 8 97 -2664 822 220 5 72 chr10 103996906 103997081 -41592207 + MLT1F LTR MaLR 1 159 -383 2206 112 3 0 chr10 103997081 103997385 -41591903 + AluSx SINE Alu 1 305 -7 822 220 5 72 chr10 103997385 103997432 -41591856 + MLT1F LTR MaLR 159 208 -334 227 306 72 27 chr10 103997516 103997627 -41591661 + MIR SINE MIR 20 135 -73 382 258 138 18 chr10 103997734 103997901 -41591387 - MIR SINE MIR -29 233 47 605 206 14 93 chr10 103998475 103998689 -41590599 - MLT1L LTR MaLR -225 390 194 2010 119 7 0 chr10 103999058 103999351 -41589937 + AluSx SINE Alu 1 295 -17 611 276 56 33 chr10 103999423 103999727 -41589561 - L1ME4a LINE L1 -227 5894 5584 3160 260 131 12 chr10 104000344 104001651 -41587637 + L2 LINE L2 1706 3173 -140 198 103 0 0 chr10 104001654 104001683 -41587605 + (CA)n Simple_repeat Simple_repeat 2 30 0 757 142 85 43 chr10 104001740 104001881 -41587407 + AluJb SINE Alu 136 282 -30 190 56 56 0 chr10 104001903 104001939 -41587349 + (TA)n Simple_repeat Simple_repeat 1 38 0 2202 102 0 0 chr10 104001942 104002237 -41587051 + AluSx SINE Alu 1 295 -17 301 122 27 0 chr10 104002236 104002310 -41586978 + (TA)n Simple_repeat Simple_repeat 2 77 0 23 33 0 0 chr10 104003341 104003371 -41585917 + AT_rich Low_complexity Low_complexity 1 30 0 1714 162 41 14 chr10 104004548 104004838 -41584450 - AluJo SINE Alu -14 298 1 2193 118 0 25 chr10 104004928 104005242 -41584046 + AluSq SINE Alu 1 306 -7 2275 122 0 0 chr10 104005244 104005556 -41583732 + AluSx SINE Alu 1 312 0 2153 97 11 4 chr10 104005720 104005999 -41583289 + AluSg SINE Alu 17 297 -13 1575 111 5 0 chr10 104006020 104006227 -41583061 + AluY SINE Alu 1 208 -103 1578 202 150 6 chr10 104006406 104006752 -41582536 - MSTD LTR MaLR 0 396 1 1851 166 3 7 chr10 104007045 104007340 -41581948 - AluJb SINE Alu -12 300 7 639 251 59 25 chr10 104007734 104007937 -41581351 - MIR SINE MIR -6 256 47 222 343 89 12 chr10 104008450 104008619 -41580669 + MIR SINE MIR 5 186 -76 360 268 57 0 chr10 104009396 104009519 -41579769 + MIR SINE MIR 121 250 -12 453 82 14 27 chr10 104009926 104009999 -41579289 + L1PB4 LINE L1 6082 6153 -3 674 202 0 8 chr10 104010490 104010609 -41578679 - FLAM_A SINE Alu -14 119 2 261 83 0 0 chr10 104010623 104010659 -41578629 + (A)n Simple_repeat Simple_repeat 1 36 0 26 50 0 0 chr10 104012210 104012250 -41577038 + AT_rich Low_complexity Low_complexity 1 40 0 2249 119 0 0 chr10 104012445 104012747 -41576541 + AluJb SINE Alu 1 302 -10 271 286 29 38 chr10 104013452 104013557 -41575731 - MER5A DNA MER1_type -29 160 57 332 321 120 11 chr10 104014878 104015062 -41574226 - MIR SINE MIR -48 214 11 2013 117 30 0 chr10 104016062 104016361 -41572927 + AluSx SINE Alu 1 308 -4 426 321 109 0 chr10 104016362 104016527 -41572761 + MIR SINE MIR 46 228 -34 230 303 45 0 chr10 104016863 104016929 -41572359 - MIR3 SINE MIR -26 182 114 2553 67 0 0 chr10 104017263 104017563 -41571725 + AluY SINE Alu 1 300 -11 2178 97 21 7 chr10 104017882 104018172 -41571116 + AluSg SINE Alu 1 294 -16 2349 88 3 3 chr10 104018176 104018483 -41570805 + AluSg SINE Alu 1 307 -3 235 234 39 0 chr10 104018909 104018986 -41570302 - MER116 DNA Mariner 0 80 1 2332 103 3 0 chr10 104019903 104020213 -41569075 - AluSp SINE Alu -2 311 1 185 292 31 31 chr10 104020885 104020950 -41568338 + MIR3 SINE MIR 94 158 -50 456 240 8 16 chr10 104021012 104021133 -41568155 + LTR33 LTR ERVL 391 510 -11 318 275 73 0 chr10 104021541 104021650 -41567638 - MER103 DNA DNA -48 118 2 262 261 56 21 chr10 104021732 104021835 -41567453 - MIR SINE MIR -93 115 7 457 236 146 24 chr10 104021837 104022002 -41567286 - MER5A DNA MER1_type -4 185 1 2314 101 0 3 chr10 104022762 104023060 -41566228 + AluSx SINE Alu 1 297 -15 1997 125 3 17 chr10 104023452 104023747 -41565541 + AluJo SINE Alu 1 291 -21 306 305 133 0 chr10 104023834 104023985 -41565303 - MIR SINE MIR -18 244 74 385 283 67 76 chr10 104024606 104024764 -41564524 - MIR SINE MIR -29 233 76 2296 96 3 10 chr10 104024764 104025065 -41564223 + AluSx SINE Alu 1 299 -13 385 283 67 76 chr10 104025065 104025129 -41564159 - MIR SINE MIR -186 76 13 553 271 47 29 chr10 104025155 104025366 -41563922 + L1MC4a LINE L1 5683 5906 -215 2334 97 7 0 chr10 104025366 104025656 -41563632 + AluSx SINE Alu 3 294 -18 553 271 47 29 chr10 104025656 104025717 -41563571 + L1MC4a LINE L1 5906 5964 -157 201 349 0 12 chr10 104027351 104027434 -41561854 + MIR SINE MIR 50 131 -77 550 236 69 52 chr10 104027623 104027797 -41561491 - MIR SINE MIR -77 185 9 21 36 0 0 chr10 104027822 104027850 -41561438 + AT_rich Low_complexity Low_complexity 1 28 0 462 259 14 14 chr10 104027852 104027995 -41561293 - MIR SINE MIR -113 149 7 1526 107 70 0 chr10 104029771 104029885 -41559403 + MER30 DNA MER1_type 1 106 -124 315 0 0 0 chr10 104029885 104029920 -41559368 + (CA)n Simple_repeat Simple_repeat 2 36 0 1526 107 70 0 chr10 104029920 104030020 -41559268 + MER30 DNA MER1_type 106 230 0 211 404 9 9 chr10 104030325 104030439 -41558849 + L3 LINE CR1 36 149 -1428 189 0 0 0 chr10 104031418 104031439 -41557849 + (A)n Simple_repeat Simple_repeat 1 21 0 369 0 0 0 chr10 104031974 104032015 -41557273 + (TC)n Simple_repeat Simple_repeat 1 41 0 236 298 36 0 chr10 104032015 104032099 -41557189 - MER113 DNA MER1_type? -102 419 333 542 335 0 15 chr10 104032488 104032685 -41556603 + MIR3 SINE MIR 9 202 -6 187 349 0 0 chr10 104032707 104032773 -41556515 - L2 LINE L2 0 3272 3207 195 309 167 0 chr10 104034775 104034859 -41554429 - MIR3 SINE MIR 0 208 111 2062 123 0 10 chr10 104035610 104035911 -41553377 + AluSx SINE Alu 5 302 -10 953 158 0 7 chr10 104035942 104036088 -41553200 + AluSq/x SINE Alu 3 147 -166 234 298 29 0 chr10 104036137 104036241 -41553047 - HAL1 LINE L1 -120 2387 2281 670 156 0 91 chr10 104036244 104036398 -41552890 - FLAM_C SINE Alu -3 140 1 3180 250 109 84 chr10 104036408 104036729 -41552559 - HAL1 LINE L1 -212 2295 1983 1790 155 14 7 chr10 104036729 104037026 -41552262 - AluJo SINE Alu 0 302 4 3180 250 109 84 chr10 104037026 104037542 -41551746 - HAL1 LINE L1 -524 1983 1481 2359 93 0 3 chr10 104037542 104037843 -41551445 - AluSx SINE Alu -12 300 1 3180 250 109 84 chr10 104037843 104039242 -41550046 - HAL1 LINE L1 -1026 1481 2 194 333 13 0 chr10 104039246 104039324 -41549964 + L2 LINE L2 3234 3312 -1 343 214 38 76 chr10 104039479 104039610 -41549678 + MIR SINE MIR 28 153 -55 195 167 0 0 chr10 104039634 104039670 -41549618 - L2 LINE L2 -23 3249 3214 212 305 0 0 chr10 104039875 104039934 -41549354 + L2 LINE L2 3197 3255 -17 263 367 111 0 chr10 104040312 104040519 -41548769 + L3 LINE CR1 1321 1550 -27 399 298 8 0 chr10 104040523 104040644 -41548644 - L2 LINE L2 -1 3312 3191 701 235 65 20 chr10 104040646 104040846 -41548442 - MER3 DNA MER1_type 0 209 1 789 234 28 60 chr10 104041010 104041206 -41548082 + MIR SINE MIR 19 207 -55 2023 146 0 13 chr10 104041206 104041522 -41547766 + AluJb SINE Alu 1 312 0 789 234 28 60 chr10 104041522 104041577 -41547711 + MIR SINE MIR 207 262 0 1894 132 45 3 chr10 104042223 104042512 -41546776 - AluSq SINE Alu -12 301 1 2027 137 7 0 chr10 104042927 104043227 -41546061 + AluSx SINE Alu 1 302 -10 2866 124 9 25 chr10 104043253 104043688 -41545600 + MSTA LTR MaLR 1 428 0 1980 125 29 0 chr10 104044264 104044543 -41544745 - AluSg SINE Alu -15 295 9 366 332 75 60 chr10 104045805 104046191 -41543097 + L2 LINE L2 2881 3272 0 284 186 17 17 chr10 104046428 104046487 -41542801 + Charlie7 DNA MER1_type 2554 2612 0 1012 114 0 0 chr10 104046521 104046691 -41542597 - AluSp/q SINE Alu 0 324 155 211 273 94 8 chr10 104048079 104048207 -41541081 - L2 LINE L2 -214 3058 2920 204 258 79 11 chr10 104049245 104049334 -41539954 - L2 LINE L2 -220 3052 2958 238 267 136 43 chr10 104049393 104049590 -41539698 - MIR SINE MIR -15 247 34 331 193 132 23 chr10 104049759 104049895 -41539393 - MIR3 SINE MIR -20 188 39 679 243 79 20 chr10 104050218 104050420 -41538868 - MIR SINE MIR 0 262 49 941 201 88 15 chr10 104050535 104050739 -41538549 + MER20 DNA MER1_type 1 219 0 427 132 15 0 chr10 104050893 104050961 -41538327 + AluS SINE Alu 226 294 -18 789 268 104 4 chr10 104051027 104051277 -41538011 - MER102a DNA MER1_type 0 330 56 1898 159 3 3 chr10 104051420 104051722 -41537566 + AluJb SINE Alu 1 302 -10 180 152 0 0 chr10 104052474 104052507 -41536781 + A-rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr10 104053477 104053498 -41535790 + AT_rich Low_complexity Low_complexity 1 21 0 334 235 29 0 chr10 104055035 104055103 -41534185 + MER20 DNA MER1_type 150 219 0 819 148 0 0 chr10 104055463 104055591 -41533697 - AluJb SINE Alu -11 301 174 1778 146 28 0 chr10 104056201 104056489 -41532799 - AluJb SINE Alu -16 296 1 203 296 80 56 chr10 104056789 104056914 -41532374 - L2 LINE L2 0 3272 3145 201 216 0 0 chr10 104057083 104057120 -41532168 + L2 LINE L2 3233 3269 -3 382 213 27 0 chr10 104057457 104057532 -41531756 - MER94 DNA DNA -51 83 7 436 302 9 0 chr10 104058584 104058690 -41530598 - MER94 DNA DNA -17 117 11 245 239 45 0 chr10 104058793 104058860 -41530428 - L1MC/D LINE L1 -1922 5886 5817 248 337 43 0 chr10 104059111 104059203 -41530085 + L2 LINE L2 2974 3069 -203 242 143 20 0 chr10 104059216 104059265 -41530023 + (TCCA)n Simple_repeat Simple_repeat 4 53 0 228 313 148 57 chr10 104059267 104059497 -41529791 - L2 LINE L2 0 3272 3022 2108 114 0 0 chr10 104059925 104060231 -41529057 + AluSg SINE Alu 1 306 -4 282 215 15 15 chr10 104060893 104060958 -41528330 - MER5A DNA MER1_type 0 189 125 2392 143 78 14 chr10 104061064 104061489 -41527799 - LTR47A LTR ERVL 0 452 1 238 186 47 0 chr10 104061536 104061579 -41527709 - MER91B DNA MER1_type -113 77 33 491 328 134 6 chr10 104061590 104061904 -41527384 - MLT1L LTR MaLR -95 520 167 180 333 57 0 chr10 104062093 104062198 -41527090 - MIR SINE MIR -113 149 39 339 266 115 36 chr10 104062521 104062713 -41526575 - MIR SINE MIR -55 207 1 362 292 25 8 chr10 104063037 104063157 -41526131 + MIR SINE MIR 25 146 -62 246 277 181 0 chr10 104063888 104063971 -41525317 - L2 LINE L2 -15 3298 3201 206 257 200 19 chr10 104064174 104064279 -41525009 - L2 LINE L2 -1 3271 3148 297 286 0 0 chr10 104064574 104064644 -41524644 + MIR3 SINE MIR 91 160 -48 254 313 12 0 chr10 104064760 104064840 -41524448 + MER5A DNA MER1_type 109 189 0 2471 74 0 0 chr10 104065378 104065690 -41523598 - AluSx SINE Alu 0 312 1 226 324 0 27 chr10 104066204 104066278 -41523010 + L2 LINE L2 3200 3271 -1 189 375 29 29 chr10 104066540 104066644 -41522644 - MIR SINE MIR -57 151 48 429 316 23 8 chr10 104066760 104066893 -41522395 - L3 LINE CR1 -80 1497 1363 1975 121 0 7 chr10 104066896 104067185 -41522103 - AluSx SINE Alu -25 287 1 327 237 132 35 chr10 104067277 104067391 -41521897 - L2 LINE L2 0 3313 3189 845 196 62 11 chr10 104067664 104067843 -41521445 + MER5A DNA MER1_type 2 189 0 349 254 109 67 chr10 104067856 104068021 -41521267 + MER5B DNA MER1_type 1 172 -6 498 271 72 34 chr10 104068060 104068267 -41521021 + MIR SINE MIR 16 230 -32 206 318 217 8 chr10 104068329 104068458 -41520830 - L3 LINE CR1 -335 1242 1087 958 241 140 9 chr10 104068458 104068773 -41520515 + L1MC4a LINE L1 5574 5929 -1879 1261 279 92 24 chr10 104068945 104069447 -41519841 - L3 LINE CR1 -478 1099 564 341 284 74 0 chr10 104069458 104069553 -41519735 - L2 LINE L2 0 3272 3171 1096 182 53 0 chr10 104069586 104069795 -41519493 - MER58A DNA MER1_type -4 220 1 739 299 110 11 chr10 104069949 104070213 -41519075 - L3 LINE CR1 -1081 496 207 1540 89 68 0 chr10 104070819 104071056 -41518232 - AluSq SINE Alu -60 253 1 619 274 24 38 chr10 104071153 104071354 -41517934 - MIR SINE MIR -32 230 37 661 294 145 11 chr10 104071493 104071775 -41517513 + L3 LINE CR1 1147 1466 -111 348 43 0 0 chr10 104071780 104071826 -41517462 + (TTCA)n Simple_repeat Simple_repeat 2 47 0 228 346 108 8 chr10 104071828 104071958 -41517330 - L2 LINE L2 -13 3259 3117 772 255 53 89 chr10 104072034 104072508 -41516780 + LTR16A1 LTR ERVL 1 457 0 347 295 207 8 chr10 104072509 104072746 -41516542 - L2 LINE L2 -583 2731 2448 234 305 24 12 chr10 104072741 104072823 -41516465 + L3 LINE CR1 1464 1546 -31 * 440 293 198 5 chr10 104073213 104073425 -41515863 - MIR SINE MIR -8 254 2 2606 133 50 5 chr10 104074322 104074766 -41514522 + L1MC2 LINE L1 5881 6344 0 1816 162 3 10 chr10 104074893 104075202 -41514086 + AluJb SINE Alu 1 307 -5 2428 63 0 3 chr10 104075296 104075596 -41513692 - AluY SINE Alu -6 305 7 1446 174 73 0 chr10 104075654 104075929 -41513359 - AluJb SINE Alu -16 296 2 236 320 29 0 chr10 104075995 104076098 -41513190 - L1ME LINE L1 -288 5882 5777 523 259 196 39 chr10 104076164 104076320 -41512968 + L1ME4a LINE L1 5816 5946 -175 2071 118 0 7 chr10 104076320 104076616 -41512672 - AluSq SINE Alu -19 294 1 1478 184 3 26 chr10 104076618 104076922 -41512366 - AluJo SINE Alu -5 307 11 523 259 196 39 chr10 104076922 104077017 -41512271 + L1ME4a LINE L1 5946 6110 -11 270 366 54 32 chr10 104078057 104078336 -41510952 + L2 LINE L2 2553 2837 -477 275 324 56 102 chr10 104078786 104079178 -41510110 + MLT1K LTR MaLR 149 522 -66 322 279 129 25 chr10 104079279 104079519 -41509769 - L1ME4a LINE L1 -4 6117 5853 234 105 0 0 chr10 104079616 104079654 -41509634 + (GGGA)n Simple_repeat Simple_repeat 3 40 0 1989 141 0 3 chr10 104080549 104080853 -41508435 - AluSx SINE Alu -9 303 1 1333 216 7 17 chr10 104080866 104081157 -41508131 - AluJo SINE Alu -24 288 1 200 246 35 18 chr10 104081759 104081816 -41507472 + L2 LINE L2 3215 3272 0 262 222 0 63 chr10 104081831 104081894 -41507394 + L2 LINE L2 2995 3053 -219 5157 148 10 39 chr10 104081954 104082118 -41507170 + L1MB7 LINE L1 5277 5444 -740 1067 181 0 11 chr10 104082118 104082295 -41506993 + FAM SINE Alu 1 175 0 5157 148 10 39 chr10 104082295 104083045 -41506243 + L1MB7 LINE L1 5444 6164 -20 222 253 27 27 chr10 104084378 104084453 -41504835 + CT-rich Low_complexity Low_complexity 4 78 0 512 156 15 30 chr10 104084796 104084931 -41504357 + C-rich Low_complexity Low_complexity 3 135 0 297 75 0 0 chr10 104084982 104085022 -41504266 + (TCCC)n Simple_repeat Simple_repeat 3 42 0 1552 159 9 81 chr10 104085022 104085193 -41504095 - AluJo SINE Alu -15 297 158 1928 138 0 17 chr10 104085193 104085491 -41503797 - AluSx SINE Alu -19 293 1 1552 159 9 81 chr10 104085491 104085639 -41503649 - AluJo SINE Alu -154 158 1 865 196 6 18 chr10 104085800 104085963 -41503325 - FRAM SINE Alu -1 165 5 314 240 101 23 chr10 104086580 104086709 -41502579 - MIR SINE MIR 0 262 124 208 279 14 100 chr10 104087134 104087274 -41502014 - L2 LINE L2 -83 3230 3103 724 192 23 0 chr10 104087420 104087550 -41501738 - MER45A DNA AcHobo 0 178 46 1862 139 3 19 chr10 104087783 104088093 -41501195 + AluJb SINE Alu 1 305 -7 245 143 82 0 chr10 104088121 104088170 -41501118 - L2 LINE L2 -225 3047 2995 2363 63 3 3 chr10 104088170 104088473 -41500815 - AluSg SINE Alu -7 303 1 238 212 83 114 chr10 104088852 104088891 -41500397 - L1ME LINE L1 -222 5899 5860 1867 112 48 20 chr10 104088891 104089186 -41500102 - AluSx SINE Alu -9 303 1 238 212 83 114 chr10 104089186 104089339 -41499949 - L1ME LINE L1 -261 5860 5713 361 214 56 112 chr10 104089360 104089538 -41499750 + MIR SINE MIR 92 259 -3 268 236 47 57 chr10 104090009 104090115 -41499173 + MIR3 SINE MIR 58 162 -46 436 244 89 15 chr10 104090236 104090371 -41498917 + L2 LINE L2 3168 3312 -1 518 227 41 132 chr10 104090375 104090595 -41498693 + MIR SINE MIR 40 239 -23 516 226 90 7 chr10 104090599 104090754 -41498534 - MIR SINE MIR -1 261 94 27 49 0 0 chr10 104090977 104091018 -41498270 + GC_rich Low_complexity Low_complexity 1 41 0 31 92 0 0 chr10 104091202 104091289 -41497999 + GC_rich Low_complexity Low_complexity 1 87 0 22 35 0 0 chr10 104092422 104092451 -41496837 + GC_rich Low_complexity Low_complexity 1 29 0 252 295 90 24 chr10 104093487 104093653 -41495635 + MIR3 SINE MIR 17 193 -15 305 385 0 7 chr10 104094012 104094160 -41495128 - MIR3 SINE MIR -14 194 48 1886 131 3 35 chr10 104094198 104094511 -41494777 - AluJo SINE Alu -9 303 1 2235 96 0 3 chr10 104095668 104095981 -41493307 + AluSx SINE Alu 1 312 0 1062 130 6 6 chr10 104095981 104096150 -41493138 + AluSg/x SINE Alu 132 300 -10 2217 82 23 3 chr10 104097343 104097646 -41491642 + AluSq SINE Alu 1 309 -4 23 33 0 0 chr10 104097763 104097793 -41491495 + AT_rich Low_complexity Low_complexity 1 30 0 234 0 0 0 chr10 104097800 104097826 -41491462 + (TG)n Simple_repeat Simple_repeat 2 27 0 353 138 0 0 chr10 104097836 104097894 -41491394 - Alu SINE Alu -1 299 242 394 283 115 42 chr10 104098639 104098830 -41490458 + MIR SINE MIR 42 246 -16 1958 120 3 13 chr10 104099546 104099845 -41489443 + AluJb SINE Alu 3 298 -14 1097 97 13 0 chr10 104099920 104100074 -41489214 + AluSg/x SINE Alu 137 292 -20 201 222 22 44 chr10 104100325 104100370 -41488918 + L2 LINE L2 3257 3300 -13 2116 87 3 24 chr10 104100856 104101154 -41488134 - AluSx SINE Alu -20 292 1 2211 92 20 0 chr10 104101161 104101465 -41487823 - AluSp SINE Alu -3 310 1 338 284 52 43 chr10 104102968 104103084 -41486204 - MIR3 SINE MIR -38 170 54 631 216 66 84 chr10 104103184 104103411 -41485877 + MIR SINE MIR 6 228 -34 434 283 39 117 chr10 104103820 104104128 -41485160 - L2 LINE L2 -4 3268 2985 329 248 113 43 chr10 104104345 104104486 -41484802 - MIR SINE MIR -62 200 50 363 208 73 21 chr10 104104924 104105020 -41484268 + MIR SINE MIR 95 195 -67 1079 156 39 0 chr10 104105172 104105352 -41483936 - MER5A DNA MER1_type 0 189 3 233 307 0 27 chr10 104106255 104106330 -41482958 - MER5A DNA MER1_type -32 157 85 424 309 195 48 chr10 104108715 104109062 -41480226 + L3 LINE CR1 268 563 -1014 1939 138 7 3 chr10 104109062 104109367 -41479921 - AluSx SINE Alu -6 306 1 424 309 195 48 chr10 104109367 104109598 -41479690 + L3 LINE CR1 563 931 -646 1401 192 3 42 chr10 104109988 104110300 -41478988 + AluJb SINE Alu 1 300 -12 569 164 154 0 chr10 104110703 104110807 -41478481 - FLAM_A SINE Alu -12 121 2 1597 116 0 0 chr10 104110949 104111173 -41478115 + AluSg/x SINE Alu 69 292 -18 233 183 107 107 chr10 104111256 104111425 -41477863 + L1ME4a LINE L1 5949 6117 -4 638 255 150 20 chr10 104111597 104111844 -41477444 - HAL1 LINE L1 -4 2503 2225 219 69 0 0 chr10 104111853 104111882 -41477406 + (T)n Simple_repeat Simple_repeat 1 29 0 390 331 46 0 chr10 104112800 104112930 -41476358 - L3 LINE CR1 -113 1464 1329 787 133 0 6 chr10 104113265 104113520 -41475768 + AluJo SINE Alu 1 304 -8 2095 113 13 0 chr10 104113572 104113873 -41475415 - AluSx SINE Alu -7 305 1 2253 90 0 0 chr10 104114342 104114642 -41474646 + AluSx SINE Alu 1 300 -12 228 67 0 0 chr10 104115219 104115249 -41474039 + (TG)n Simple_repeat Simple_repeat 1 30 0 243 177 13 51 chr10 104115485 104115564 -41473724 + L1ME4a LINE L1 6044 6119 -2 26 0 0 0 chr10 104116365 104116391 -41472897 + AT_rich Low_complexity Low_complexity 1 26 0 302 266 0 13 chr10 104116680 104116759 -41472529 - Charlie4 DNA MER1_type 0 1961 1884 601 256 117 11 chr10 104116765 104116945 -41472343 - MIR SINE MIR -1 261 63 219 318 127 16 chr10 104117256 104117382 -41471906 + MIR SINE MIR 35 174 -88 475 252 34 34 chr10 104117682 104117829 -41471459 - MIR3 SINE MIR -1 207 61 306 87 0 0 chr10 104118482 104118528 -41470760 + (TG)n Simple_repeat Simple_repeat 2 47 0 1074 173 0 0 chr10 104119756 104119929 -41469359 - FAM SINE Alu -2 173 1 335 305 158 6 chr10 104120257 104120421 -41468867 + MER5A DNA MER1_type 1 189 0 222 296 80 11 chr10 104120633 104120721 -41468567 - MIR SINE MIR -111 151 58 1472 170 31 7 chr10 104120793 104121087 -41468201 - MER33 DNA MER1_type -4 320 20 619 286 173 8 chr10 104121778 104122131 -41467157 - Charlie8 DNA MER1_type -1945 472 62 2074 120 10 0 chr10 104122131 104122439 -41466849 + AluSx SINE Alu 1 311 -1 938 246 86 0 chr10 104122440 104122672 -41466616 - L1MD2 LINE L1 -32 6327 6076 922 133 0 0 chr10 104122682 104122810 -41466478 + FLAM_C SINE Alu 1 128 -5 227 325 70 9 chr10 104122822 104122936 -41466352 - Charlie8 DNA MER1_type -2296 121 1 1281 164 55 25 chr10 104122960 104123235 -41466053 - L1MB7 LINE L1 -15 6169 5887 365 336 15 8 chr10 104123241 104123372 -41465916 - MIR SINE MIR -60 148 17 294 257 200 0 chr10 104123561 104123666 -41465622 - L2 LINE L2 -9 3304 3179 483 335 163 43 chr10 104124316 104124641 -41464647 - L2 LINE L2 -3 3269 2906 2310 87 0 0 chr10 104125281 104125579 -41463709 + AluSg SINE Alu 5 302 -8 2204 90 0 0 chr10 104126317 104126652 -41462636 + AluY SINE Alu 3 311 0 234 0 0 0 chr10 104127393 104127419 -41461869 + (T)n Simple_repeat Simple_repeat 1 26 0 238 284 95 54 chr10 104127603 104127751 -41461537 - MER5B DNA MER1_type -20 158 5 2157 111 3 0 chr10 104128180 104128486 -41460802 - AluSg SINE Alu 0 310 4 326 50 0 0 chr10 104128945 104128985 -41460303 + tRNA-Cys-TGC tRNA tRNA 1 40 -35 434 212 12 0 chr10 104129056 104129141 -41460147 + L2 LINE L2 3228 3313 0 203 243 206 19 chr10 104129524 104129631 -41459657 + MIR3 SINE MIR 30 156 -52 562 208 103 108 chr10 104129683 104130130 -41459158 - Charlie8 DNA MER1_type -2141 276 3 208 200 44 22 chr10 104130136 104130181 -41459107 + L3 LINE CR1 1530 1575 -2 207 350 97 44 chr10 104130563 104130744 -41458544 + MIR SINE MIR 16 205 -57 408 275 69 15 chr10 104131849 104131980 -41457308 - L2 LINE L2 0 3313 3176 * 518 209 0 52 chr10 104131975 104132090 -41457198 + L2 LINE L2 3189 3297 -16 560 239 121 62 chr10 104132097 104132512 -41456776 - L2 LINE L2 -116 3197 2753 208 286 117 0 chr10 104132616 104132693 -41456595 - MIR SINE MIR -123 139 54 189 121 0 0 chr10 104132820 104132853 -41456435 + (TG)n Simple_repeat Simple_repeat 2 34 0 26 0 0 0 chr10 104132873 104132899 -41456389 + AT_rich Low_complexity Low_complexity 1 26 0 527 309 82 18 chr10 104134672 104134792 -41454496 - L1ME4a LINE L1 -67 6054 5943 2221 98 3 0 chr10 104134792 104135087 -41454201 + AluSx SINE Alu 1 296 -16 527 309 82 18 chr10 104135087 104135354 -41453934 - L1ME4a LINE L1 -178 5943 5642 22 0 0 0 chr10 104135528 104135550 -41453738 + AT_rich Low_complexity Low_complexity 1 22 0 1967 125 14 3 chr10 104136060 104136349 -41452939 + AluSx SINE Alu 1 292 -20 288 310 85 50 chr10 104136519 104136719 -41452569 - L2 LINE L2 -338 2976 2770 221 333 65 8 chr10 104136915 104137038 -41452250 + L2 LINE L2 3133 3262 -10 380 343 44 25 chr10 104137452 104137656 -41451632 - L2 LINE L2 -1289 2025 1818 1641 172 10 10 chr10 104138107 104138404 -41450884 - AluJb SINE Alu -13 299 3 1928 123 37 0 chr10 104138424 104138724 -41450564 - AluSx SINE Alu -1 311 1 446 264 8 24 chr10 104140000 104140125 -41449163 - LTR67 LTR ERVL -7 550 428 419 308 91 34 chr10 104140887 104141095 -41448193 + L1ME4a LINE L1 5727 5946 -175 1762 145 16 16 chr10 104141197 104141508 -41447780 + AluJo SINE Alu 1 311 -1 21 0 0 0 chr10 104141541 104141562 -41447726 + AT_rich Low_complexity Low_complexity 1 21 0 423 268 143 36 chr10 104142016 104142112 -41447176 - MER5A DNA MER1_type 0 189 105 2063 114 3 13 chr10 104142112 104142419 -41446869 - AluSx SINE Alu -8 304 1 423 268 143 36 chr10 104142419 104142490 -41446798 - MER5A DNA MER1_type -84 105 4 1769 199 42 25 chr10 104142569 104142859 -41446429 + L1ME1 LINE L1 4435 4736 -1410 2158 152 96 10 chr10 104142859 104143253 -41446035 - MSTA LTR MaLR 0 428 1 1769 199 42 25 chr10 104143253 104143394 -41445894 + L1ME1 LINE L1 4736 4873 -1273 1385 214 30 3 chr10 104143380 104143684 -41445604 + L1ME1 LINE L1 5853 6164 -2 * 715 315 70 0 chr10 104143794 104144035 -41445253 + MIR SINE MIR 4 261 -1 291 309 130 6 chr10 104144154 104144316 -41444972 - MIR3 SINE MIR -13 195 14 209 196 0 54 chr10 104144645 104144701 -41444587 - MIR SINE MIR -13 249 197 308 226 0 12 chr10 104144713 104144797 -41444491 - L1MA10 LINE L1 -13 6321 6239 388 315 89 47 chr10 104145325 104145507 -41443781 + MIR SINE MIR 3 197 -65 1711 110 0 27 chr10 104145507 104145770 -41443518 - AluSx SINE Alu -12 300 45 388 315 89 47 chr10 104145770 104145800 -41443488 + MIR SINE MIR 197 224 -38 305 317 89 25 chr10 104146338 104146540 -41442748 + L1ME4a LINE L1 5711 5925 -196 416 328 26 21 chr10 104146548 104146737 -41442551 - MIR SINE MIR -34 228 39 341 303 98 60 chr10 104147357 104147591 -41441697 + MIR SINE MIR 20 262 0 230 293 34 82 chr10 104147715 104147923 -41441365 - L2 LINE L2 -165 3107 2910 423 285 26 6 chr10 104148725 104148853 -41440435 + MIR SINE MIR 26 151 -57 220 330 98 9 chr10 104149523 104149635 -41439653 + MIR SINE MIR 22 143 -65 200 176 0 0 chr10 104152552 104152586 -41436702 + C-rich Low_complexity Low_complexity 1 34 0 198 0 0 0 chr10 104153258 104153280 -41436008 + (TG)n Simple_repeat Simple_repeat 2 23 0 493 319 97 29 chr10 104153796 104154034 -41435254 + MIR SINE MIR 9 262 0 598 210 86 70 chr10 104154170 104154356 -41434932 - MER5A DNA MER1_type 0 189 1 1740 168 26 0 chr10 104155113 104155416 -41433872 - AluJb SINE Alu -1 311 1 205 343 29 0 chr10 104155656 104155726 -41433562 - L2 LINE L2 -12 3260 3189 203 296 37 0 chr10 104155867 104155921 -41433367 + MIR3 SINE MIR 141 196 -12 2144 108 3 0 chr10 104156132 104156429 -41432859 + AluSx SINE Alu 1 298 -14 446 227 122 87 chr10 104157030 104157151 -41432137 + MIR SINE MIR 64 194 -68 2164 121 0 10 chr10 104157151 104157464 -41431824 - AluSg SINE Alu 0 310 1 446 227 122 87 chr10 104157464 104157514 -41431774 + MIR SINE MIR 194 241 -21 216 339 152 37 chr10 104157604 104157985 -41431303 - L2 LINE L2 -731 2583 2159 1653 256 76 49 chr10 104158715 104159266 -41430022 - MER77 LTR ERV1 -6 599 53 207 245 0 19 chr10 104159453 104159506 -41429782 + A-rich Low_complexity Low_complexity 1 52 0 284 256 238 24 chr10 104160077 104160241 -41429047 - MIR SINE MIR -34 228 30 215 336 89 13 chr10 104160753 104160868 -41428420 - MIR SINE MIR -66 142 46 1410 190 106 0 chr10 104160890 104161201 -41428087 + MER2 DNA MER2_type 1 344 0 799 221 0 0 chr10 104161387 104161536 -41427752 + MER5A DNA MER1_type 1 149 -40 587 189 173 40 chr10 104161675 104161906 -41427382 + MIR SINE MIR 2 251 -11 2056 168 6 3 chr10 104162073 104162412 -41426876 + MER58B DNA MER1_type 2 341 0 635 232 133 26 chr10 104162463 104162696 -41426592 - MIR SINE MIR -3 259 2 295 119 0 0 chr10 104163128 104163204 -41426084 + Alu SINE Alu 241 316 0 306 0 0 0 chr10 104166490 104166524 -41422764 + (T)n Simple_repeat Simple_repeat 1 34 0 190 397 0 0 chr10 104167019 104167092 -41422196 - L2 LINE L2 -6 3307 3235 465 304 22 50 chr10 104167136 104167317 -41421971 - MER5A DNA MER1_type -6 183 8 242 163 23 0 chr10 104168716 104168759 -41420529 - L2 LINE L2 -17 3255 3212 21 0 0 0 chr10 104171166 104171187 -41418101 + AT_rich Low_complexity Low_complexity 1 21 0 198 0 0 0 chr10 104171848 104171870 -41417418 + (T)n Simple_repeat Simple_repeat 1 22 0 337 274 28 28 chr10 104172172 104172278 -41417010 - MER5A DNA MER1_type -80 109 4 1932 142 0 22 chr10 104172454 104172770 -41416518 - AluJb SINE Alu -3 309 1 1313 124 0 5 chr10 104172782 104172999 -41416289 - AluSg/x SINE Alu 0 308 93 350 263 26 64 chr10 104173070 104173226 -41416062 - MIR3 SINE MIR -33 175 26 229 282 165 0 chr10 104173593 104173678 -41415610 + MIR SINE MIR 30 128 -80 491 224 32 16 chr10 104173752 104173877 -41415411 + MIR SINE MIR 117 243 -19 351 330 83 43 chr10 104174380 104174656 -41414632 - L2 LINE L2 -4 3309 3023 536 213 15 134 chr10 104174824 104174955 -41414333 - MER5A DNA MER1_type -3 186 86 1793 150 6 25 chr10 104174955 104175269 -41414019 - AluJo SINE Alu -4 308 1 536 213 15 134 chr10 104175269 104175339 -41413949 - MER5A DNA MER1_type -103 86 9 353 261 194 0 chr10 104175506 104175640 -41413648 + MIR SINE MIR 33 192 -70 200 274 55 14 chr10 104175734 104175807 -41413481 - L2 LINE L2 -5 3308 3233 322 308 37 19 chr10 104176363 104176470 -41412818 + MIR SINE MIR 39 147 -61 2243 94 0 0 chr10 104176567 104176865 -41412423 + AluSc SINE Alu 1 298 -11 849 130 0 36 chr10 104177523 104177661 -41411627 + AluJb SINE Alu 9 141 -171 1623 153 0 71 chr10 104177661 104177987 -41411301 + AluJb SINE Alu 1 303 -9 1592 176 48 0 chr10 104179034 104179323 -41409965 - AluJo SINE Alu -9 303 1 574 307 33 29 chr10 104180048 104180292 -41408996 + MIR SINE MIR 2 246 -16 310 392 32 0 chr10 104180384 104180509 -41408779 + L2 LINE L2 3101 3229 -43 341 311 8 45 chr10 104180656 104180788 -41408500 - MIR SINE MIR -46 216 90 912 179 0 0 chr10 104180935 104181080 -41408208 - MER58B DNA MER1_type -15 326 182 362 235 10 20 chr10 104181613 104181711 -41407577 + MER103 DNA DNA 2 98 -68 468 299 107 17 chr10 104182287 104182464 -41406824 - MIR SINE MIR -62 200 8 347 261 11 11 chr10 104182486 104182578 -41406710 + MIR SINE MIR 73 164 -98 21 0 0 0 chr10 104182865 104182886 -41406402 + AT_rich Low_complexity Low_complexity 1 21 0 222 293 33 93 chr10 104183574 104183626 -41405662 + MIR3 SINE MIR 3 57 -151 2299 74 7 0 chr10 104183626 104183922 -41405366 + AluSp SINE Alu 1 298 -15 222 293 33 93 chr10 104183922 104184019 -41405269 + MIR3 SINE MIR 57 143 -65 337 279 144 0 chr10 104186643 104186754 -41402534 - L2 LINE L2 -1 3312 3186 216 346 153 16 chr10 104187751 104188005 -41401283 + L3b LINE CR1 1193 1481 -102 22 0 0 0 chr10 104188142 104188164 -41401124 + AT_rich Low_complexity Low_complexity 1 22 0 741 265 71 25 chr10 104189074 104189312 -41399976 - MIR SINE MIR -12 250 2 2199 90 0 26 chr10 104189485 104189795 -41399493 + AluSx SINE Alu 7 308 -4 202 191 143 0 chr10 104189807 104189849 -41399439 + MER5B DNA MER1_type 131 178 0 859 152 0 28 chr10 104190875 104191020 -41398268 + FRAM SINE Alu 22 162 -14 2103 113 7 0 chr10 104192148 104192449 -41396839 + AluSx SINE Alu 1 303 -9 276 311 106 13 chr10 104192784 104192935 -41396353 + MIR SINE MIR 28 146 -62 1802 153 3 32 chr10 104193283 104193596 -41395692 - AluJo SINE Alu -8 304 1 1994 153 0 6 chr10 104193758 104194072 -41395216 - AluSx SINE Alu 0 312 1 447 224 20 107 chr10 104196542 104196738 -41392550 + MIR SINE MIR 84 262 0 1498 135 4 20 chr10 104196977 104197229 -41392059 - AluSg/x SINE Alu 0 312 65 1465 161 23 0 chr10 104197706 104197967 -41391321 + L1 LINE L1 4752 5018 -1128 698 223 134 42 chr10 104198029 104198267 -41391021 - MIR SINE MIR -2 260 1 1713 167 13 10 chr10 104198956 104199255 -41390033 + AluJb SINE Alu 2 301 -11 1921 117 57 0 chr10 104199330 104199611 -41389677 + AluSx SINE Alu 1 297 -15 405 0 0 0 chr10 104201079 104201124 -41388164 + (CA)n Simple_repeat Simple_repeat 2 46 0 589 276 44 11 chr10 104201215 104201396 -41387892 - MIR SINE MIR -13 249 63 1783 142 14 10 chr10 104201546 104201841 -41387447 + AluJb SINE Alu 1 296 -16 245 196 0 20 chr10 104202205 104202256 -41387032 + L2 LINE L2 3223 3272 0 24 0 0 0 chr10 104202620 104202644 -41386644 + AT_rich Low_complexity Low_complexity 1 24 0 425 276 151 71 chr10 104202991 104203216 -41386072 - L2 LINE L2 -2 3270 3028 526 220 34 17 chr10 104203395 104203513 -41385775 + L2 LINE L2 3194 3313 0 350 255 144 45 chr10 104203651 104203894 -41385394 - L2 LINE L2 -813 2501 2235 263 283 39 4 chr10 104204415 104204532 -41384756 + MIR SINE MIR 81 206 -56 1869 97 0 40 chr10 104204543 104204821 -41384467 + AluSg SINE Alu 1 267 -43 2145 116 0 0 chr10 104205184 104205477 -41383811 + AluSx SINE Alu 1 293 -19 862 185 144 118 chr10 104205547 104205937 -41383351 - MER57A LTR ERV1 0 403 4 804 156 7 15 chr10 104206766 104206901 -41382387 + AluJo SINE Alu 5 138 -174 415 192 216 30 chr10 104206953 104207120 -41382168 + MIR SINE MIR 46 243 -19 381 188 0 0 chr10 104207549 104207629 -41381659 + (TG)n Simple_repeat Simple_repeat 1 80 0 354 45 0 0 chr10 104208899 104208943 -41380345 + (TC)n Simple_repeat Simple_repeat 1 44 0 1956 120 0 17 chr10 104212492 104212792 -41376496 + AluSx SINE Alu 1 295 -17 395 268 66 44 chr10 104213510 104213693 -41375595 - MIR3 SINE MIR -3 205 19 21 0 0 0 chr10 104214155 104214176 -41375112 + AT_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr10 104216084 104216112 -41373176 + AT_rich Low_complexity Low_complexity 1 28 0 1685 153 0 48 chr10 104216155 104216469 -41372819 + AluJo SINE Alu 1 299 -13 1355 196 17 38 chr10 104216526 104216817 -41372471 + AluJo SINE Alu 1 285 -27 880 220 50 11 chr10 104217204 104217386 -41371902 - MER5A DNA MER1_type 0 189 1 1740 166 31 0 chr10 104218267 104218556 -41370732 + AluJb SINE Alu 1 298 -14 2121 111 0 3 chr10 104218562 104218860 -41370428 + AluSx SINE Alu 1 297 -15 577 286 179 0 chr10 104220024 104220192 -41369096 - MIR SINE MIR -21 241 44 260 244 24 81 chr10 104220441 104220564 -41368724 - MER103 DNA DNA 0 166 51 564 307 97 9 chr10 104220921 104221149 -41368139 + MIR SINE MIR 4 251 -11 2059 116 0 3 chr10 104221593 104221886 -41367402 + AluSx SINE Alu 1 292 -20 445 250 0 0 chr10 104221897 104221993 -41367295 + MER103 DNA DNA 25 120 -46 21 82 0 0 chr10 104222646 104222695 -41366593 + AT_rich Low_complexity Low_complexity 1 49 0 2351 80 3 0 chr10 104222712 104223024 -41366264 + AluSp SINE Alu 1 313 0 1938 86 45 28 chr10 104223124 104223434 -41365854 + AluSg SINE Alu 1 315 0 1813 139 7 17 chr10 104223562 104223857 -41365431 + AluJb SINE Alu 1 292 -20 456 273 116 42 chr10 104223858 104224074 -41365214 - MIR SINE MIR -2 260 29 229 349 0 12 chr10 104224816 104224902 -41364386 + CT-rich Low_complexity Low_complexity 3 87 0 2104 100 42 0 chr10 104225157 104225446 -41363842 + AluSq SINE Alu 1 301 -12 752 158 0 0 chr10 104225456 104225576 -41363712 + FLAM_C SINE Alu 21 140 -3 234 310 70 0 chr10 104226195 104226295 -41362993 + L1ME4a LINE L1 5703 5809 -361 536 284 81 52 chr10 104226308 104226618 -41362670 + L1ME4a LINE L1 5803 6121 0 2330 71 3 0 chr10 104227290 104227584 -41361704 + AluSx SINE Alu 1 295 -17 212 275 0 50 chr10 104228920 104229000 -41360288 + T-rich Low_complexity Low_complexity 3 78 0 564 195 57 0 chr10 104230573 104230696 -41358592 + MIR SINE MIR 48 177 -85 208 347 10 31 chr10 104231271 104231369 -41357919 + MIR SINE MIR 128 223 -39 3527 105 30 42 chr10 104232436 104232507 -41356781 - LTR49 LTR ERV1 0 595 525 1837 109 51 7 chr10 104232507 104232801 -41356487 - AluSx SINE Alu -5 307 1 3527 105 30 42 chr10 104232801 104233331 -41355957 - LTR49 LTR ERV1 -70 525 1 227 224 0 20 chr10 104233490 104233539 -41355749 + L2 LINE L2 3224 3271 -1 1793 127 16 71 chr10 104233545 104233868 -41355420 + AluSx SINE Alu 1 305 -7 3179 139 35 0 chr10 104234046 104234535 -41354753 - MER84 LTR ERV1 0 507 2 516 42 42 14 chr10 104234535 104234607 -41354681 - MER84 LTR ERVI -433 74 1 236 318 73 18 chr10 104234607 104234717 -41354571 - L2 LINE L2 -237 3035 2920 493 343 52 6 chr10 104235048 104235220 -41354068 + MIR3 SINE MIR 20 199 -9 2180 107 0 13 chr10 104235491 104235800 -41353488 + AluSx SINE Alu 5 309 -3 504 100 0 0 chr10 104235817 104235887 -41353401 + HY1 scRNA scRNA 5 74 -38 1433 199 19 0 chr10 104236791 104237053 -41352235 + AluJb SINE Alu 1 267 -45 329 252 47 28 chr10 104237330 104237437 -41351851 + MIR SINE MIR 117 225 -37 319 307 105 46 chr10 104238315 104238468 -41350820 - MIR3 SINE MIR -9 199 38 219 69 0 0 chr10 104239014 104239043 -41350245 + (TG)n Simple_repeat Simple_repeat 1 29 0 1138 158 190 7 chr10 104239247 104239526 -41349762 - MER33 DNA MER1_type -2 322 1 252 227 241 21 chr10 104239536 104239677 -41349611 + L3b LINE CR1 1143 1314 -269 2040 103 47 10 chr10 104240443 104240743 -41348545 + AluSx SINE Alu 1 311 -1 257 328 239 0 chr10 104241207 104241341 -41347947 + MER5A DNA MER1_type 18 183 -6 417 269 88 31 chr10 104241348 104241508 -41347780 - L3 LINE CR1 -80 1497 1329 259 298 27 8 chr10 104241894 104242015 -41347273 + MIR SINE MIR 5 130 -78 265 267 114 29 chr10 104242178 104242283 -41347005 + MIR3 SINE MIR 68 181 -27 1621 152 60 3 chr10 104242309 104242592 -41346696 - AluJo SINE Alu -13 299 1 470 340 101 12 chr10 104244754 104245180 -41344108 - L2 LINE L2 -236 3036 2579 2174 101 7 0 chr10 104245620 104245917 -41343371 + AluSc SINE Alu 1 299 -10 181 343 20 30 chr10 104246216 104246315 -41342973 - L2 LINE L2 -2106 1208 1111 203 244 0 0 chr10 104246764 104246809 -41342479 + L2 LINE L2 3269 3313 0 1598 110 46 13 chr10 104247311 104247548 -41341740 + MER1B DNA MER1_type 135 339 0 2116 103 0 0 chr10 104248227 104248557 -41340731 - AluSx SINE Alu 0 330 1 657 269 84 44 chr10 104248786 104249013 -41340275 - MIR SINE MIR -7 255 20 1501 179 42 6 chr10 104249350 104249663 -41339625 - MER33 DNA MER1_type 0 324 1 1964 145 0 0 chr10 104249831 104250127 -41339161 - AluSx SINE Alu -16 296 1 231 246 46 138 chr10 104250214 104250344 -41338944 + MIR3 SINE MIR 73 190 -18 353 320 23 8 chr10 104250359 104250487 -41338801 + MER117 DNA MER1_type 15 144 -53 470 284 20 60 chr10 104250838 104251039 -41338249 + MIR SINE MIR 20 212 -50 2055 121 10 0 chr10 104255647 104255952 -41333336 - AluJb SINE Alu -4 308 1 867 138 7 0 chr10 104255952 104256090 -41333198 - AluJb SINE Alu -172 140 2 288 77 0 0 chr10 104256276 104256315 -41332973 + (CA)n Simple_repeat Simple_repeat 2 40 0 25 31 0 0 chr10 104260292 104260324 -41328964 + AT_rich Low_complexity Low_complexity 1 32 0 216 0 0 0 chr10 104263410 104263434 -41325854 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2203 104 37 0 chr10 104264780 104265079 -41324209 + AluSx SINE Alu 1 310 -2 185 221 15 0 chr10 104266655 104266723 -41322565 + CT-rich Low_complexity Low_complexity 4 72 0 296 197 30 0 chr10 104268343 104268409 -41320879 - AluS SINE Alu -235 68 1 222 231 0 51 chr10 104268546 104268624 -41320664 + CT-rich Low_complexity Low_complexity 2 75 0 2595 57 0 0 chr10 104268753 104269052 -41320236 - AluY SINE Alu -12 299 1 233 292 42 33 chr10 104269275 104269395 -41319893 - L1M4 LINE L1 -2061 4085 3965 439 92 31 0 chr10 104270286 104270351 -41318937 + HY1 scRNA scRNA 1 67 -45 1238 147 0 5 chr10 104270351 104270548 -41318740 - AluSp SINE Alu 0 313 118 875 91 0 0 chr10 104270661 104270771 -41318517 - AluY SINE Alu -201 110 1 278 94 0 19 chr10 104270774 104270827 -41318461 + HY1 scRNA scRNA 60 111 -1 912 126 0 15 chr10 104271126 104271261 -41318027 + FLAM_C SINE Alu 1 133 0 24 0 0 0 chr10 104271261 104271285 -41318003 + AT_rich Low_complexity Low_complexity 1 24 0 328 221 159 0 chr10 104271446 104271559 -41317729 + MIR3 SINE MIR 45 175 -33 2031 153 0 0 chr10 104271645 104271940 -41317348 + AluSx SINE Alu 1 295 -17 616 244 44 44 chr10 104272131 104272402 -41316886 - L1MC5 LINE L1 -54 7907 7637 914 189 47 117 chr10 104272435 104272795 -41316493 + L1MC5 LINE L1 6824 7158 -803 1247 157 124 28 chr10 104272814 104273063 -41316225 - AluJb SINE Alu -39 273 1 2296 107 0 3 chr10 104273122 104273420 -41315868 - AluSx SINE Alu -15 297 1 1420 158 21 151 chr10 104273425 104273950 -41315338 - L1MC5 LINE L1 -690 7271 6815 273 261 0 0 chr10 104274709 104274774 -41314514 + MER115 DNA AcHobo 597 661 -32 210 258 21 62 chr10 104275575 104275672 -41313616 - MIR SINE MIR -1 261 169 1469 295 56 20 chr10 104275672 104276194 -41313094 - MLT1L LTR MaLR 0 615 68 2332 95 7 0 chr10 104276194 104276499 -41312789 + AluSc SINE Alu 1 307 -2 1469 295 56 20 chr10 104276499 104276570 -41312718 - MLT1L LTR MaLR -547 68 1 336 283 60 3 chr10 104276581 104276697 -41312591 - MIR SINE MIR -70 138 16 596 167 0 0 chr10 104277117 104277207 -41312081 + FLAM_A SINE Alu 26 115 -27 2268 98 3 0 chr10 104277208 104277505 -41311783 + AluSc SINE Alu 1 298 -11 467 269 45 27 chr10 104277748 104277971 -41311317 - L1ME LINE L1 -5165 1766 1540 874 182 0 0 chr10 104277973 104278116 -41311172 - AluJb SINE Alu -13 299 157 2223 74 0 14 chr10 104278139 104278455 -41310833 - AluY SINE Alu 0 312 1 2093 141 3 10 chr10 104278465 104278770 -41310518 - AluSx SINE Alu -9 303 1 2444 105 0 0 chr10 104278782 104279095 -41310193 - AluSq SINE Alu 0 313 1 265 281 32 23 chr10 104279095 104279311 -41309977 - L1ME LINE L1 -5122 1301 1142 2436 86 3 0 chr10 104279615 104279917 -41309371 + AluSp SINE Alu 1 303 -10 1268 194 19 8 chr10 104280519 104280878 -41308410 - L1MA4A LINE L1 -23 6280 5857 3874 134 36 12 chr10 104281747 104282034 -41307254 - L1MA4A LINE L1 -433 5870 5592 2190 137 0 0 chr10 104282034 104282341 -41306947 + AluSx SINE Alu 1 307 -5 3874 134 36 12 chr10 104282341 104283183 -41306105 - L1MA4A LINE L1 -711 5592 4707 290 107 71 0 chr10 104283983 104284039 -41305249 - L3 LINE CR1 -3 1574 1515 182 325 169 0 chr10 104284066 104284149 -41305139 + MIR SINE MIR 44 140 -68 1706 153 9 88 chr10 104284249 104284541 -41304747 - AluJo SINE Alu 0 418 164 2320 97 0 7 chr10 104284541 104284839 -41304449 - AluSg SINE Alu -14 296 1 1706 153 9 88 chr10 104284839 104284991 -41304297 - AluJo SINE Alu -254 164 1 1062 121 0 0 chr10 104285116 104285257 -41304031 + AluSg/x SINE Alu 131 271 -39 279 0 0 0 chr10 104285258 104285289 -41303999 + (TC)n Simple_repeat Simple_repeat 2 32 0 * 786 97 0 0 chr10 104285288 104285401 -41303887 + (TA)n Simple_repeat Simple_repeat 2 114 0 1562 189 20 24 chr10 104285402 104285699 -41303589 - AluJo SINE Alu -16 296 1 261 229 189 33 chr10 104285701 104285854 -41303434 - L1ME4a LINE L1 -122 5999 5823 2139 137 0 0 chr10 104285862 104286168 -41303120 + AluSg SINE Alu 1 306 -4 819 153 0 8 chr10 104286168 104286287 -41303001 - AluJo/FLAM SINE Alu -184 118 1 330 288 166 5 chr10 104286785 104286990 -41302298 + MIR SINE MIR 12 249 -13 639 212 7 44 chr10 104287069 104287206 -41302082 + FLAM_A SINE Alu 1 132 -1 385 267 224 48 chr10 104287251 104287461 -41301827 - MIR SINE MIR 0 262 16 190 304 120 24 chr10 104288453 104288578 -41300710 - MIR3 SINE MIR -67 141 5 1085 199 45 119 chr10 104288642 104289063 -41300225 - MLT1B LTR MaLR 0 390 1 2279 102 7 0 chr10 104289196 104289491 -41299797 - AluSq SINE Alu -16 297 1 548 293 45 87 chr10 104289711 104290135 -41299153 + MLT1J LTR MaLR 37 442 -69 338 286 79 7 chr10 104290168 104290308 -41298980 - MER5A DNA MER1_type -30 159 10 261 0 0 0 chr10 104290347 104290376 -41298912 + (TG)n Simple_repeat Simple_repeat 1 29 0 391 230 87 16 chr10 104290526 104290652 -41298636 - MIR3 SINE MIR -54 154 20 850 239 102 59 chr10 104290851 104291311 -41297977 + MLT1J LTR MaLR 19 498 -13 680 310 87 24 chr10 104293820 104294201 -41295087 - L2 LINE L2 -1 3312 2908 441 286 137 40 chr10 104294200 104294427 -41294861 + MIR SINE MIR 12 260 -2 * 1752 155 11 0 chr10 104294810 104295088 -41294200 - AluJo SINE Alu -31 281 1 2335 96 3 0 chr10 104295158 104295459 -41293829 - AluSp SINE Alu -8 305 4 325 235 59 0 chr10 104295868 104295953 -41293335 + MIR SINE MIR 75 164 -98 2397 85 0 7 chr10 104296057 104296363 -41292925 - AluSx SINE Alu -8 304 1 611 271 103 5 chr10 104296847 104297061 -41292227 + MIR SINE MIR 26 260 -2 204 40 0 0 chr10 104297190 104297215 -41292073 + (TGAA)n Simple_repeat Simple_repeat 2 26 0 239 233 55 14 chr10 104297229 104297302 -41291986 + MIR SINE MIR 116 191 -71 2115 121 19 13 chr10 104297983 104298290 -41290998 + AluSx SINE Alu 1 309 -3 1557 219 54 43 chr10 104301065 104301338 -41287950 + L1ME3 LINE L1 5668 5948 -214 1667 154 26 52 chr10 104301338 104301643 -41287645 + AluJb SINE Alu 1 297 -15 1557 219 54 43 chr10 104301643 104301854 -41287434 + L1ME3 LINE L1 5948 6155 -7 230 191 206 48 chr10 104301884 104301947 -41287341 - MIR SINE MIR -180 82 10 553 258 108 43 chr10 104302042 104302284 -41287004 + MIR SINE MIR 7 262 0 612 315 16 28 chr10 104302966 104303217 -41286071 - MIR SINE MIR -10 252 5 2130 130 0 3 chr10 104303254 104303562 -41285726 + AluSx SINE Alu 1 307 -5 2019 121 21 3 chr10 104304613 104304903 -41284385 - AluSc SINE Alu -14 295 1 198 250 136 0 chr10 104305136 104305224 -41284064 + MIR SINE MIR 49 148 -114 8617 53 7 9 chr10 104305385 104307242 -41282046 + L1PA6 LINE L1 4294 6154 0 2004 124 31 3 chr10 104307610 104307901 -41281387 - AluSx SINE Alu -13 299 1 355 298 148 30 chr10 104307988 104308324 -41280964 + L1ME4a LINE L1 5561 5954 -167 1853 166 0 13 chr10 104308484 104308791 -41280497 - AluJo SINE Alu -9 303 1 2506 61 0 0 chr10 104308829 104309126 -41280162 - AluY SINE Alu -14 297 1 244 339 9 0 chr10 104309539 104309654 -41279634 - L1ME LINE L1 -294 5827 5712 1224 142 0 0 chr10 104309685 104309861 -41279427 - AluSg/x SINE Alu 0 312 137 2281 96 3 0 chr10 104309861 104310154 -41279134 - AluSp SINE Alu -19 294 1 1217 179 123 11 chr10 104310158 104310426 -41278862 - AluSx SINE Alu -14 298 1 384 242 183 20 chr10 104310548 104310701 -41278587 + MIR3 SINE MIR 18 195 -13 812 224 32 23 chr10 104311135 104311354 -41277934 + MIR SINE MIR 40 260 -2 290 351 54 0 chr10 104313403 104313514 -41275774 + L2 LINE L2 3156 3272 0 193 217 133 36 chr10 104315223 104315306 -41273982 - MIR SINE MIR -69 193 103 1278 187 4 40 chr10 104316391 104316642 -41272646 - AluJb SINE Alu -70 242 1 1979 153 0 0 chr10 104316644 104316932 -41272356 - AluJb SINE Alu -19 293 6 1136 110 0 24 chr10 104317704 104317868 -41271420 - AluSp SINE Alu -153 160 1 3066 198 102 55 chr10 104317914 104318658 -41270630 - L1ME2 LINE L1 -10 6154 5446 2200 129 0 13 chr10 104318658 104318969 -41270319 - AluSx SINE Alu -5 307 1 3066 198 102 55 chr10 104318969 104319420 -41269868 - L1ME2 LINE L1 -718 5446 5018 527 138 11 11 chr10 104319420 104319507 -41269781 - L1PB2 LINE L1 -7 6144 6058 3066 198 102 55 chr10 104319507 104319538 -41269750 - L1ME2 LINE L1 -1146 5018 4990 1705 144 18 21 chr10 104319538 104319823 -41269465 + AluJo SINE Alu 5 288 -24 3066 198 102 55 chr10 104319823 104320295 -41268993 - L1ME2 LINE L1 -1174 4990 4353 26 50 0 0 chr10 104320353 104320393 -41268895 + AT_rich Low_complexity Low_complexity 1 40 0 239 198 123 12 chr10 104320434 104320515 -41268773 - L1ME4a LINE L1 -150 5971 5882 235 114 0 0 chr10 104320758 104320793 -41268495 + Alu SINE Alu 112 146 -20 309 51 0 0 chr10 104320795 104320834 -41268454 + (TGAA)n Simple_repeat Simple_repeat 2 40 0 2030 143 3 0 chr10 104321070 104321364 -41267924 - AluSx SINE Alu -17 295 1 23 0 0 0 chr10 104321426 104321449 -41267839 + AT_rich Low_complexity Low_complexity 1 23 0 307 115 250 83 chr10 104322131 104322227 -41267061 - MER112 DNA MER1_type -7 253 142 759 140 0 0 chr10 104322227 104322334 -41266954 - AluSx SINE Alu -12 300 194 1075 106 0 7 chr10 104322335 104322477 -41266811 - AluSx SINE Alu -171 141 1 493 229 43 43 chr10 104322523 104322663 -41266625 - MER112 DNA MER1_type -120 140 1 439 248 113 0 chr10 104322784 104322925 -41266363 - MIR SINE MIR -10 252 96 21 0 0 0 chr10 104323034 104323055 -41266233 + AT_rich Low_complexity Low_complexity 1 21 0 259 224 52 95 chr10 104323298 104323414 -41265874 + MIR SINE MIR 151 261 -1 210 37 0 0 chr10 104323447 104323474 -41265814 + (T)n Simple_repeat Simple_repeat 1 27 0 586 281 71 77 chr10 104323647 104323985 -41265303 - MER102b DNA MER1_type 0 341 6 2448 85 0 3 chr10 104324222 104324527 -41264761 + AluSq SINE Alu 1 304 -9 870 187 5 75 chr10 104325019 104325206 -41264082 - AluJb SINE Alu -33 279 106 241 275 55 33 chr10 104325217 104325308 -41263980 + MIR SINE MIR 156 248 -14 2229 92 0 0 chr10 104325320 104325601 -41263687 + AluSg SINE Alu 1 281 -29 3409 143 77 67 chr10 104326273 104326352 -41262936 + L1MB8 LINE L1 5424 5501 -677 2289 116 0 0 chr10 104326352 104326655 -41262633 + AluSg SINE Alu 1 303 -7 3409 143 77 67 chr10 104326655 104327251 -41262037 + L1MB8 LINE L1 5501 6109 -69 1939 163 7 0 chr10 104327251 104327551 -41261737 - AluJo SINE Alu -8 304 3 3409 143 77 67 chr10 104327551 104327617 -41261671 + L1MB8 LINE L1 6109 6173 -5 1712 133 137 0 chr10 104328698 104328968 -41260320 - AluSx SINE Alu -5 307 1 755 209 0 0 chr10 104329159 104329288 -41260000 - FLAM_A SINE Alu -1 132 4 262 209 75 0 chr10 104329308 104329375 -41259913 + L2 LINE L2 3241 3312 -1 199 267 147 13 chr10 104329944 104330019 -41259269 - L2 LINE L2 0 3272 3188 581 230 16 24 chr10 104331380 104331506 -41257782 + L2 LINE L2 3188 3312 -1 812 299 17 0 chr10 104331689 104331920 -41257368 - MIR SINE MIR 0 262 28 194 292 92 0 chr10 104332461 104332526 -41256762 - MER5A DNA MER1_type -28 161 91 25 0 0 0 chr10 104332543 104332568 -41256720 + AT_rich Low_complexity Low_complexity 1 25 0 725 260 51 10 chr10 104332574 104332770 -41256518 + AluJo SINE Alu 2 205 -107 234 0 0 0 chr10 104332870 104332896 -41256392 + (CAA)n Simple_repeat Simple_repeat 1 26 0 1765 164 0 30 chr10 104332910 104333208 -41256080 - AluJo SINE Alu -23 289 1 618 89 13 0 chr10 104333278 104333357 -41255931 - MADE1 DNA Mariner 0 80 1 782 175 8 8 chr10 104333764 104333890 -41255398 - AluJb SINE Alu -18 294 169 419 130 0 0 chr10 104333889 104333943 -41255345 - Alu SINE Alu -254 55 2 * 1371 173 30 23 chr10 104333979 104334245 -41255043 + AluJo SINE Alu 45 312 0 2408 204 84 91 chr10 104334258 104335229 -41254059 - L1MC5 LINE L1 -64 7897 6932 2199 121 7 0 chr10 104335229 104335527 -41253761 - AluSx SINE Alu -12 300 1 2408 204 84 91 chr10 104335527 104335610 -41253678 - L1MC5 LINE L1 -1029 6932 6850 21 0 0 0 chr10 104336303 104336324 -41252964 + AT_rich Low_complexity Low_complexity 1 21 0 678 224 0 0 chr10 104336419 104336535 -41252753 - AluJo/FRAM SINE Alu -34 278 163 1883 145 3 14 chr10 104336535 104336825 -41252463 - AluJo SINE Alu -25 287 1 275 109 0 0 chr10 104336827 104336870 -41252418 - AluJo/FLAM SINE Alu -178 124 87 987 192 68 0 chr10 104337064 104337241 -41252047 + MER58A DNA MER1_type 27 215 -9 1644 159 8 4 chr10 104337244 104337508 -41251780 + AluJb SINE Alu 30 294 -18 239 315 120 0 chr10 104337522 104337614 -41251674 - MER5B DNA MER1_type -75 103 1 378 242 21 11 chr10 104338299 104338394 -41250894 + L1ME LINE L1 5515 5610 -511 4823 150 71 36 chr10 104338599 104338717 -41250571 + L1MD1 LINE L1 5150 5262 -980 2624 158 24 7 chr10 104338717 104339142 -41250146 + MSTB1 LTR MaLR 1 432 0 4823 150 71 36 chr10 104339142 104339214 -41250074 + L1MD1 LINE L1 5262 5330 -912 2246 118 3 0 chr10 104339214 104339520 -41249768 + AluSx SINE Alu 1 307 -5 4823 150 71 36 chr10 104339520 104339786 -41249502 + L1MD1 LINE L1 5330 5585 -657 2729 118 68 8 chr10 104339786 104340186 -41249102 - MSTA LTR MaLR 0 428 5 4823 150 71 36 chr10 104340186 104340786 -41248502 + L1MD1 LINE L1 5585 6242 0 2117 102 24 14 chr10 104340812 104341105 -41248183 + AluSx SINE Alu 1 296 -16 1749 177 3 7 chr10 104341267 104341566 -41247722 + AluJo SINE Alu 1 298 -14 2050 81 4 4 chr10 104342529 104342787 -41246501 - AluSc SINE Alu -13 296 39 596 279 98 49 chr10 104343386 104343482 -41245806 + MIR SINE MIR 1 91 -171 357 127 0 48 chr10 104343482 104343572 -41245716 - L1PA10 LINE L1 0 6168 6101 596 279 98 49 chr10 104343572 104343719 -41245569 + MIR SINE MIR 91 256 -6 252 0 0 0 chr10 104344044 104344072 -41245216 + (TG)n Simple_repeat Simple_repeat 2 29 0 774 191 8 0 chr10 104345741 104345872 -41243416 + FLAM_A SINE Alu 2 133 0 1859 167 119 19 chr10 104346077 104346437 -41242851 + MSTD LTR MaLR 1 396 0 2326 136 35 14 chr10 104346573 104346940 -41242348 + THE1C LTR MaLR 1 375 0 847 138 46 20 chr10 104347467 104347619 -41241669 + THE1C LTR MaLR 141 296 -79 198 239 22 22 chr10 104347892 104347938 -41241350 + L2 LINE L2 3174 3219 -94 511 215 21 97 chr10 104349038 104349224 -41240064 + MER5B DNA MER1_type 7 178 0 885 159 0 0 chr10 104349320 104349469 -41239819 - AluJb SINE Alu 0 307 159 650 91 0 0 chr10 104349476 104349564 -41239724 + L1MB7 LINE L1 6071 6158 -26 1836 151 10 17 chr10 104350963 104351119 -41238169 - AluJo SINE Alu -23 289 134 2366 82 7 0 chr10 104351119 104351412 -41237876 - AluSq SINE Alu -18 295 1 1836 151 10 17 chr10 104351412 104351546 -41237742 - AluJo SINE Alu -178 134 1 850 161 0 0 chr10 104351554 104351678 -41237610 - FLAM_C SINE Alu -17 126 3 194 133 0 0 chr10 104353080 104353110 -41236178 - L3 LINE CR1 -7 1570 1541 1032 164 0 0 chr10 104353479 104353638 -41235650 - AluJo/FRAM SINE Alu -20 292 134 2226 118 0 7 chr10 104353639 104353943 -41235345 - AluSx SINE Alu -10 302 1 24 0 0 0 chr10 104353947 104353971 -41235317 + AT_rich Low_complexity Low_complexity 1 24 0 536 125 0 0 chr10 104354173 104354245 -41235043 - FLAM_C SINE Alu -36 107 36 2418 74 0 3 chr10 104354307 104354603 -41234685 - AluY SINE Alu -16 295 1 2888 10 0 0 chr10 104355420 104355730 -41233558 - AluYa8 SINE Alu 0 310 1 2225 101 10 7 chr10 104356619 104356916 -41232372 - AluSg SINE Alu -12 298 1 2221 123 0 0 chr10 104356923 104357216 -41232072 - AluSx SINE Alu -19 293 1 204 302 16 0 chr10 104357219 104357282 -41232006 - L2 LINE L2 -1 3271 3208 1762 185 3 3 chr10 104357753 104358050 -41231238 + AluJb SINE Alu 1 297 -15 2206 98 0 14 chr10 104358050 104358345 -41230943 + AluSg SINE Alu 1 291 -19 33 25 0 0 chr10 104359786 104359826 -41229462 + AT_rich Low_complexity Low_complexity 1 40 0 180 326 52 59 chr10 104361130 104361265 -41228023 - L2 LINE L2 -793 2521 2388 362 227 93 53 chr10 104361806 104361897 -41227391 - MER103 DNA DNA -1 165 64 1912 156 0 3 chr10 104361897 104362185 -41227103 + AluJo SINE Alu 5 291 -21 362 227 93 53 chr10 104362185 104362243 -41227045 - MER103 DNA DNA -102 64 10 207 234 62 0 chr10 104362800 104362864 -41226424 - L3 LINE CR1 -354 1223 1156 587 205 193 6 chr10 104363740 104363911 -41225377 - L1ME3 LINE L1 -2 6160 5958 2493 74 6 3 chr10 104364055 104364367 -41224921 + AluSq SINE Alu 1 313 0 511 273 169 0 chr10 104365226 104365380 -41223908 + MER5A DNA MER1_type 10 189 0 201 147 0 0 chr10 104365388 104365422 -41223866 - MER5A DNA MER1_type -139 50 17 337 351 111 0 chr10 104365804 104365975 -41223313 - MIR3 SINE MIR -14 194 5 1814 142 37 14 chr10 104366029 104366325 -41222963 - AluJo SINE Alu -9 303 1 182 183 37 98 chr10 104367097 104367179 -41222109 - L2 LINE L2 -654 2660 2584 1792 137 61 4 chr10 104367218 104367495 -41221793 - AluSx SINE Alu -19 293 1 350 274 38 38 chr10 104367895 104368001 -41221287 - MIR SINE MIR -108 154 49 205 163 93 0 chr10 104368069 104368112 -41221176 - L2 LINE L2 -5 3308 3262 2071 122 3 3 chr10 104368269 104368563 -41220725 + AluSc SINE Alu 1 294 -15 1431 84 58 40 chr10 104368698 104368924 -41220364 - MER30 DNA MER1_type 0 230 1 230 257 0 29 chr10 104370599 104370669 -41218619 + GA-rich Low_complexity Low_complexity 1 68 0 894 182 49 35 chr10 104370810 104370938 -41218350 + MER3 DNA MER1_type 1 135 -74 2222 110 0 10 chr10 104370938 104371246 -41218042 - AluSx SINE Alu -7 305 1 894 182 49 35 chr10 104371246 104371320 -41217968 + MER3 DNA MER1_type 135 206 -3 491 215 28 9 chr10 104371759 104371866 -41217422 + L2 LINE L2 3190 3298 -15 180 0 0 0 chr10 104372316 104372336 -41216952 + (TTAA)n Simple_repeat Simple_repeat 1 20 0 2078 114 11 0 chr10 104372340 104372621 -41216667 - AluSx SINE Alu -27 285 2 2658 125 27 20 chr10 104373479 104373886 -41215402 + MSTC LTR MaLR 19 428 0 3442 244 16 2 chr10 104373888 104374674 -41214614 + MSTC-int LTR MaLR 2 798 -937 1032 142 65 0 chr10 104374698 104374867 -41214421 + MSTC LTR MaLR 249 428 0 827 209 47 31 chr10 104375051 104375242 -41214046 + AluJb SINE Alu 119 312 0 1996 151 10 0 chr10 104375370 104375662 -41213626 + AluJb SINE Alu 1 295 -17 249 180 0 0 chr10 104375672 104375722 -41213566 + GA-rich Low_complexity Low_complexity 1 50 0 373 213 182 59 chr10 104376151 104376437 -41212851 + HAL1 LINE L1 971 1291 -1216 1487 174 0 81 chr10 104376444 104376765 -41212523 + AluJo SINE Alu 16 310 -2 2376 86 0 3 chr10 104376835 104377136 -41212152 - AluSq SINE Alu -13 300 1 447 291 91 39 chr10 104377142 104377217 -41212071 + L1ME3A LINE L1 2288 2358 -3788 730 187 7 58 chr10 104377217 104377356 -41211932 + FLAM_A SINE Alu 1 132 -1 447 291 91 39 chr10 104377356 104378234 -41211054 + L1ME3A LINE L1 2358 3291 -2855 1122 296 73 36 chr10 104378241 104378835 -41210453 + L1M3d LINE L1 1116 1733 -4832 2057 96 3 21 chr10 104378835 104379126 -41210162 - AluSg1 SINE Alu -23 286 1 1122 296 73 36 chr10 104379126 104379416 -41209872 + L1M3d LINE L1 1733 2011 -4554 * 2256 259 62 56 chr10 104379395 104379543 -41209745 + L1ME3A LINE L1 4559 4705 -1725 2469 83 0 0 chr10 104379543 104379845 -41209443 + AluSx SINE Alu 3 304 -8 2037 111 7 4 chr10 104379850 104380129 -41209159 + AluSx SINE Alu 1 280 -32 180 0 0 0 chr10 104380132 104380152 -41209136 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 2256 259 62 56 chr10 104380152 104381319 -41207969 + L1ME3A LINE L1 4709 5868 -562 195 42 0 0 chr10 104381319 104381343 -41207945 + (TG)n Simple_repeat Simple_repeat 1 24 0 2256 259 62 56 chr10 104381343 104381527 -41207761 + L1ME3A LINE L1 5868 6049 -381 2281 111 0 0 chr10 104381527 104381833 -41207455 - AluSx SINE Alu -6 306 1 2256 259 62 56 chr10 104381833 104381868 -41207420 + L1ME3A LINE L1 6049 6082 -348 1512 202 41 7 chr10 104381868 104382160 -41207128 + AluJb SINE Alu 1 302 -10 2256 259 62 56 chr10 104382160 104382276 -41207012 + L1ME3A LINE L1 6082 6196 -234 6610 153 54 30 chr10 104382276 104383525 -41205763 - MER52C LTR ERV1 0 1278 1 2256 259 62 56 chr10 104383525 104383630 -41205658 + L1ME3A LINE L1 6196 6299 -131 2075 146 0 13 chr10 104383630 104383946 -41205342 - AluSx SINE Alu 0 312 1 2256 259 62 56 chr10 104383946 104384028 -41205260 + L1ME3A LINE L1 6299 6422 -8 773 281 102 55 chr10 104384043 104384245 -41205043 + L1MC4a LINE L1 5437 5628 -2180 2315 110 0 0 chr10 104384245 104384553 -41204735 - AluSc SINE Alu -1 308 1 773 281 102 55 chr10 104384553 104384823 -41204465 + L1MC4a LINE L1 5628 5931 -1877 1072 194 116 22 chr10 104385134 104385402 -41203886 - L1MD2 LINE L1 -35 6324 6032 975 103 0 0 chr10 104385416 104385552 -41203736 - AluSp/q SINE Alu -4 309 174 739 176 25 0 chr10 104385652 104385771 -41203517 - AluSq/x SINE Alu -189 124 3 2127 118 7 0 chr10 104385822 104386110 -41203178 + AluSx SINE Alu 1 290 -22 401 234 95 51 chr10 104386508 104386645 -41202643 + MLT1J LTR MaLR 1 143 -368 2082 127 69 128 chr10 104386649 104387186 -41202102 + MER39B LTR ERV1 5 509 -144 600 175 9 26 chr10 104387186 104387300 -41201988 - AluJo SINE Alu 0 312 201 * 752 248 0 0 chr10 104387297 104387446 -41201842 - AluJo SINE Alu -162 150 2 785 106 20 60 chr10 104387451 104387602 -41201686 + MER39B LTR ERV1 509 653 0 2381 148 67 49 chr10 104387604 104388450 -41200838 + MER39B-int LTR ERV1 1 1499 -4447 2515 70 0 0 chr10 104388452 104388754 -41200534 + AluY SINE Alu 1 302 -9 729 181 35 0 chr10 104388756 104388872 -41200416 - AluJo/FLAM SINE Alu -192 120 1 476 178 20 0 chr10 104388875 104388976 -41200312 - L1M4 LINE L1 -1144 5002 4900 186 347 28 14 chr10 104389119 104389191 -41200097 + MIR SINE MIR 4 76 -186 885 243 40 43 chr10 104389197 104389614 -41199674 - MLT1H LTR MaLR -39 510 7 346 212 25 76 chr10 104389623 104389741 -41199547 + MIR SINE MIR 94 205 -57 396 0 0 0 chr10 104389741 104389785 -41199503 + (ATG)n Simple_repeat Simple_repeat 3 46 0 4219 154 132 42 chr10 104389796 104390640 -41198648 - MER21A LTR ERV1 -7 924 5 269 234 124 12 chr10 104390671 104390813 -41198475 - MIR SINE MIR -10 252 29 188 273 0 23 chr10 104390843 104390887 -41198401 + MIR SINE MIR 201 243 -19 1210 265 84 45 chr10 104393045 104393509 -41195779 - MLT1J LTR MaLR 0 511 30 2210 105 3 0 chr10 104393948 104394244 -41195044 - AluSx SINE Alu -15 297 1 285 204 116 55 chr10 104394293 104394474 -41194814 - L1ME4a LINE L1 -3 6118 5927 327 330 165 19 chr10 104395570 104395837 -41193451 + HAL1 LINE L1 403 708 -1799 2355 256 155 51 chr10 104395839 104397167 -41192121 + HAL1 LINE L1 747 2212 -295 1123 138 16 5 chr10 104397236 104397424 -41191864 + L1MA4 LINE L1 6070 6259 -41 337 282 0 48 chr10 104397607 104397710 -41191578 + L2 LINE L2 3173 3270 -2 2616 17 7 3 chr10 104397803 104398100 -41191188 + AluY SINE Alu 1 298 -13 2762 143 26 80 chr10 104398108 104398673 -41190615 + LTR49-int LTR ERV1 754 1288 -5043 365 93 0 0 chr10 104398721 104398775 -41190513 + LTR49-int LTR ERV1 1290 1343 -4988 203 147 0 0 chr10 104398899 104398933 -41190355 + (TCCA)n Simple_repeat Simple_repeat 4 37 0 1912 156 0 13 chr10 104399078 104399385 -41189903 + AluJb SINE Alu 1 303 -9 1406 223 92 20 chr10 104400245 104400723 -41188565 - L1ME LINE L1 -3624 3333 2891 1076 144 85 0 chr10 104400723 104400911 -41188377 - L1MB7 LINE L1 -16 6168 5965 1521 220 0 3 chr10 104400919 104401219 -41188069 - AluJb SINE Alu -13 299 1 1406 223 92 20 chr10 104401219 104401385 -41187903 - L1ME LINE L1 -4072 2885 2647 1508 205 92 71 chr10 104401433 104401881 -41187407 + MSTB2 LTR MaLR 1 457 0 801 213 116 14 chr10 104402083 104402290 -41186998 + LTR40a LTR ERVL 281 508 -11 298 191 96 32 chr10 104402302 104402396 -41186892 - L1ME LINE L1 -4832 2023 1924 2402 92 0 6 chr10 104402412 104402740 -41186548 - LTR17 LTR ERV1 -454 326 1 2382 61 0 3 chr10 104402740 104403033 -41186255 - HERV17 LTR ERV1 0 8626 8335 313 0 0 0 chr10 104403026 104403062 -41186226 - HERV17 LTR ERV1 -1081 7545 7510 * 1298 55 0 12 chr10 104403058 104403222 -41186066 - HERV17 LTR ERV1 -1479 7147 6986 * 29723 43 1 2 chr10 104403214 104406692 -41182596 - HERV17 LTR ERV1 -2724 5902 2430 4786 82 2 8 chr10 104406675 104407300 -41181988 - HERV17 LTR ERV1 -6610 2016 1396 * 23 33 0 0 chr10 104407318 104407348 -41181940 + AT_rich Low_complexity Low_complexity 1 30 0 919 20 0 0 chr10 104407348 104407449 -41181839 - L1PA3 LINE L1 0 6155 6055 2570 24 0 0 chr10 104407449 104407743 -41181545 + L1PA3 LINE L1 5741 6034 -121 10743 55 47 17 chr10 104407743 104408937 -41180351 - HERV17 LTR ERV1 -7214 1412 170 2419 92 0 3 chr10 104408937 104409241 -41180047 + AluY SINE Alu 4 306 -5 10743 55 47 17 chr10 104409241 104409417 -41179871 - HERV17 LTR ERV1 -8456 170 1 3649 85 49 16 chr10 104409417 104409925 -41179363 - LTR17 LTR ERV1 0 780 256 1397 261 110 32 chr10 104409945 104410689 -41178599 - L1ME LINE L1 -4936 1961 1188 279 282 9 18 chr10 104411124 104411234 -41178054 - L1ME LINE L1 -6656 203 95 2692 188 67 7 chr10 104411243 104411854 -41177434 - L1MDa LINE L1 -4268 2272 1625 1495 146 49 0 chr10 104413168 104413414 -41175874 - Tigger2 DNA MER2_type 0 2718 2461 4874 135 11 7 chr10 104413480 104414215 -41175073 - Tigger2 DNA MER2_type -1974 744 7 1673 173 0 58 chr10 104415087 104415399 -41173889 - AluJb SINE Alu -13 299 6 242 354 57 0 chr10 104415922 104416067 -41173221 - MIR SINE MIR -69 193 42 765 198 237 0 chr10 104416235 104416442 -41172846 + LTR33 LTR ERVL 1 256 -265 782 326 19 16 chr10 104416443 104416765 -41172523 + LTR16C LTR ERVL 1 323 -168 2331 109 0 0 chr10 104416838 104417150 -41172138 - AluSx SINE Alu 0 312 1 6985 123 19 30 chr10 104417674 104418757 -41170531 - MER11C LTR ERVK 0 1071 1 331 182 39 13 chr10 104418939 104419016 -41170272 - MER31B LTR ERV1 -387 79 1 1901 219 110 46 chr10 104419220 104419804 -41169484 + L1MEc LINE L1 36 656 -5740 245 200 0 40 chr10 104419813 104419863 -41169425 + L1MEc LINE L1 609 656 -5740 1107 188 51 0 chr10 104419865 104420062 -41169226 + L1MEc LINE L1 556 762 -5634 359 355 42 18 chr10 104420151 104420317 -41168971 + MIR3 SINE MIR 21 190 -18 6740 124 15 8 chr10 104420542 104420900 -41168388 - L1PB1 LINE L1 -1 6150 5796 276 53 0 0 chr10 104420900 104420938 -41168350 + (TG)n Simple_repeat Simple_repeat 2 39 0 6740 124 15 8 chr10 104420938 104421549 -41167739 - L1PB1 LINE L1 -355 5796 5191 267 31 0 0 chr10 104421549 104421581 -41167707 + (TTA)n Simple_repeat Simple_repeat 3 34 0 6740 124 15 8 chr10 104421581 104422252 -41167036 - L1PB1 LINE L1 -960 5191 4495 794 246 49 20 chr10 104422247 104422491 -41166797 - L1MB8 LINE L1 -12 6166 5916 * 2299 116 0 0 chr10 104422882 104423193 -41166095 - AluSx SINE Alu 0 312 2 334 298 154 29 chr10 104423789 104423997 -41165291 + L3 LINE CR1 850 1083 -494 2444 75 0 13 chr10 104424009 104424317 -41164971 - AluY SINE Alu -7 304 1 180 333 29 38 chr10 104424392 104424497 -41164791 + MIR3 SINE MIR 96 199 -9 650 220 63 11 chr10 104424825 104425016 -41164272 - MER31B LTR ERV1 -39 427 227 996 161 55 40 chr10 104425812 104426011 -41163277 + MER20 DNA MER1_type 18 219 0 1479 193 0 40 chr10 104426437 104426737 -41162551 + AluJo SINE Alu 1 288 -24 1274 60 0 0 chr10 104426745 104426928 -41162360 + AluY SINE Alu 131 313 0 438 219 41 48 chr10 104426962 104427108 -41162180 - L1MB8 LINE L1 -386 5735 5591 234 0 0 0 chr10 104427352 104427378 -41161910 + (G)n Simple_repeat Simple_repeat 1 26 0 312 233 199 33 chr10 104427486 104427803 -41161485 - L2 LINE L2 -116 3197 2760 452 241 0 27 chr10 104428261 104428373 -41160915 + MIR SINE MIR 100 208 -54 316 308 8 17 chr10 104428366 104428486 -41160802 - MIR SINE MIR -2 260 142 * 1400 198 75 65 chr10 104428497 104428896 -41160392 - MLT1C LTR MaLR 0 467 65 449 167 24 0 chr10 104428911 104428995 -41160293 - MIR SINE MIR -106 156 71 1256 242 136 23 chr10 104429010 104429571 -41159717 + MER50 LTR ERV1 17 640 -94 371 311 49 16 chr10 104430110 104430232 -41159056 - MER5A DNA MER1_type -60 129 4 211 203 76 38 chr10 104430265 104430344 -41158944 - L2 LINE L2 -337 2976 2895 261 313 30 10 chr10 104430351 104430450 -41158838 + MIR3 SINE MIR 98 198 -10 259 380 146 11 chr10 104431038 104431414 -41157874 - L2 LINE L2 -793 2521 2095 1621 104 36 0 chr10 104431505 104431725 -41157563 - MER30 DNA MER1_type 0 230 3 2256 84 24 3 chr10 104433038 104433334 -41155954 + AluSx SINE Alu 1 302 -10 243 254 0 0 chr10 104433673 104433728 -41155560 - L2 LINE L2 -2919 395 341 1095 64 0 7 chr10 104433764 104433893 -41155395 - L1PA5 LINE L1 -233 5922 5793 1922 40 14 0 chr10 104433893 104434111 -41155177 + L1PA5 LINE L1 5921 6145 -9 1095 64 0 7 chr10 104434111 104434122 -41155166 - L1PA4 LINE L1 -362 5793 5783 334 311 83 23 chr10 104436281 104436413 -41152875 + L3 LINE CR1 1056 1195 -382 206 323 118 31 chr10 104436846 104436973 -41152315 + MIR3 SINE MIR 6 143 -65 248 51 0 26 chr10 104436979 104437018 -41152270 + (TG)n Simple_repeat Simple_repeat 2 39 0 597 285 0 1 chr10 104439239 104439410 -41149878 + MIR SINE MIR 40 208 -54 685 292 71 13 chr10 104439656 104439882 -41149406 + MIR SINE MIR 12 250 -12 462 187 89 24 chr10 104440876 104440999 -41148289 - MIR SINE MIR -58 204 74 509 157 120 0 chr10 104441136 104441244 -41148044 + MIR SINE MIR 140 260 -2 225 209 45 0 chr10 104441684 104441751 -41147537 - L3b LINE CR1 -380 1203 1134 28 61 0 0 chr10 104442109 104442158 -41147130 + AT_rich Low_complexity Low_complexity 1 49 0 495 306 32 19 chr10 104442158 104442315 -41146973 + MIR3 SINE MIR 2 160 -48 416 242 189 0 chr10 104442402 104442534 -41146754 - MER103 DNA DNA -9 157 1 219 265 29 15 chr10 104442582 104442650 -41146638 + MIR3 SINE MIR 133 201 -7 3385 30 0 0 chr10 104442960 104443330 -41145958 - L1PA3 LINE L1 -3 6152 5783 2546 70 0 0 chr10 104443686 104443987 -41145301 + AluY SINE Alu 1 301 -10 997 177 11 0 chr10 104444222 104444397 -41144891 + L1MC/D LINE L1 5572 5748 -611 24 0 0 0 chr10 104444398 104444422 -41144866 + AT_rich Low_complexity Low_complexity 1 24 0 299 225 70 0 chr10 104444692 104444763 -41144525 + LTR9 LTR ERV1 1 76 -536 * 666 182 70 14 chr10 104444749 104444892 -41144396 + LTR19C LTR ERV1 629 779 0 586 341 17 0 chr10 104445882 104446058 -41143230 + MER5A DNA MER1_type 4 182 -7 238 345 62 9 chr10 104446498 104446611 -41142677 - L2 LINE L2 -173 3099 2981 249 33 0 0 chr10 104446656 104446686 -41142602 + (TAGTG)n Simple_repeat Simple_repeat 3 32 0 290 345 40 17 chr10 104446695 104446869 -41142419 - L2 LINE L2 -455 2859 2682 276 287 112 54 chr10 104447874 104448097 -41141191 + MLT1H LTR MaLR 53 288 -261 1666 158 42 14 chr10 104448480 104448765 -41140523 + AluJb SINE Alu 1 293 -19 365 302 140 25 chr10 104449190 104449505 -41139783 - L2 LINE L2 -1145 2169 1819 6644 90 26 0 chr10 104450348 104451317 -41137971 - L1PA13 LINE L1 -4 6159 5167 4220 164 60 54 chr10 104451317 104452281 -41137007 - MER11C LTR ERVK -2 1069 100 736 218 191 16 chr10 104452706 104452894 -41136394 + MIR SINE MIR 32 252 -10 381 313 10 0 chr10 104453766 104453862 -41135426 - MER91 DNA MER1_type -56 140 44 492 307 188 0 chr10 104454221 104454439 -41134849 - MIR SINE MIR 0 262 4 1002 228 0 0 chr10 104454479 104454650 -41134638 + FAM SINE Alu 5 175 0 183 391 0 0 chr10 104454703 104454767 -41134521 - L2 LINE L2 -219 3053 2990 2744 35 0 3 chr10 104455285 104455596 -41133692 - AluY SINE Alu -1 310 1 582 196 216 0 chr10 104455757 104455905 -41133383 - MER5A DNA MER1_type 0 189 10 2329 50 0 20 chr10 104456200 104456502 -41132786 - L1P LINE L1 -1989 4157 3862 * 18155 110 15 14 chr10 104456484 104459155 -41130133 - L1P LINE L1 -3462 2684 11 343 280 134 54 chr10 104459235 104459421 -41129867 + L1ME LINE L1 5338 5538 -583 1831 156 0 0 chr10 104459607 104459895 -41129393 - L1M3f LINE L1 -5034 294 7 474 348 102 15 chr10 104459897 104460230 -41129058 - MLT1L LTR MaLR -253 362 1 307 189 81 0 chr10 104461659 104461733 -41127555 + MIR SINE MIR 102 181 -81 629 256 58 43 chr10 104461742 104461949 -41127339 + MER63A DNA MER1_type 1 210 0 24 0 0 0 chr10 104462659 104462683 -41126605 + AT_rich Low_complexity Low_complexity 1 24 0 2341 90 0 0 chr10 104462798 104463098 -41126190 - AluSg SINE Alu -10 300 1 246 280 72 40 chr10 104463102 104463203 -41126085 + L2 LINE L2 2926 3033 -239 2580 110 115 3 chr10 104463203 104463586 -41125702 - MSTB LTR MaLR 0 426 1 246 280 72 40 chr10 104463586 104463609 -41125679 + L2 LINE L2 3033 3054 -218 1350 249 132 31 chr10 104463702 104464247 -41125041 + L2 LINE L2 2437 3035 -278 2986 209 105 65 chr10 104464247 104465431 -41123857 + L1MC5 LINE L1 6682 7912 -49 2061 123 10 0 chr10 104465669 104465962 -41123326 + AluSx SINE Alu 1 296 -16 582 243 30 30 chr10 104467247 104467416 -41121872 - MER5B DNA MER1_type -3 175 7 319 328 40 35 chr10 104467436 104467610 -41121678 + MIR SINE MIR 82 256 -6 182 277 0 46 chr10 104468029 104468094 -41121194 + L2 LINE L2 3210 3271 -1 1751 155 26 23 chr10 104468358 104468662 -41120626 + AluJo SINE Alu 1 305 -7 37 0 0 0 chr10 104468819 104468856 -41120432 + AT_rich Low_complexity Low_complexity 1 37 0 1301 218 10 14 chr10 104468871 104469164 -41120124 + L1MC3 LINE L1 5952 6243 -1542 297 167 0 0 chr10 104469319 104469373 -41119915 + A-rich Low_complexity Low_complexity 1 54 0 8334 128 10 43 chr10 104470236 104471449 -41117839 + Tigger1 DNA MER2_type 1 1166 -1252 1861 139 24 7 chr10 104471449 104471737 -41117551 + AluSx SINE Alu 1 293 -19 8334 128 10 43 chr10 104471737 104471888 -41117400 + Tigger1 DNA MER2_type 1166 1320 -1098 306 188 47 20 chr10 104471988 104472077 -41117211 - Alu SINE Alu -249 53 2 22 56 0 0 chr10 104472156 104472192 -41117096 + AT_rich Low_complexity Low_complexity 1 36 0 472 228 65 16 chr10 104472856 104472979 -41116309 - L2 LINE L2 -10 3262 3134 2025 135 0 7 chr10 104473128 104473425 -41115863 - AluSx SINE Alu -17 295 1 331 231 0 15 chr10 104473823 104473888 -41115400 + L2 LINE L2 3248 3311 -2 6597 103 28 14 chr10 104474646 104475599 -41113689 - Tigger1 DNA MER2_type 0 2418 1452 3541 70 4 17 chr10 104475709 104476168 -41113120 + SVA Other Other 931 1383 -3 5059 146 8 7 chr10 104476363 104477198 -41112090 + L1P LINE L1 3547 4382 -1764 17991 118 9 14 chr10 104477247 104479933 -41109355 + L1P LINE L1 11 2684 -3462 7523 59 29 5 chr10 104479911 104480900 -41108388 + L1P LINE L1 3856 4868 -1278 * 229 57 0 0 chr10 104481003 104481038 -41108250 + Alu SINE Alu 268 302 0 1262 201 81 25 chr10 104481260 104481585 -41107703 + MLT1D LTR MaLR 154 501 -4 212 333 46 0 chr10 104481738 104481825 -41107463 - MER5B DNA MER1_type -82 96 6 1842 158 21 0 chr10 104481906 104482197 -41107091 - AluJb SINE Alu -15 297 1 228 352 79 32 chr10 104482466 104482682 -41106606 + L2 LINE L2 2439 2664 -650 4435 194 44 4 chr10 104482685 104483501 -41105787 + MER21B LTR ERV1 4 852 -11 591 276 248 19 chr10 104483933 104484244 -41105044 - L2 LINE L2 -1 3312 2931 3728 126 93 0 chr10 104484300 104484880 -41104408 - LTR24C LTR ERV1 -1 634 1 402 244 12 0 chr10 104484881 104484967 -41104321 + L2 LINE L2 3226 3312 -1 222 317 110 0 chr10 104484995 104485077 -41104211 + L2 LINE L2 3203 3293 -20 1358 164 44 0 chr10 104486044 104486270 -41103018 - MER46A DNA MER2_type 0 236 1 215 339 111 23 chr10 104486308 104486479 -41102809 - L2 LINE L2 -1392 1922 1737 1941 151 7 7 chr10 104487192 104487491 -41101797 - AluJb SINE Alu -13 299 1 656 270 39 86 chr10 104488548 104488930 -41100358 + L2 LINE L2 2907 3270 -43 390 256 12 0 chr10 104489318 104489404 -41099884 - MLT1L LTR MaLR -103 512 426 377 236 279 6 chr10 104489480 104489645 -41099643 - MLT1L LTR MaLR -363 252 43 2237 114 0 0 chr10 104490024 104490322 -41098966 - AluSc SINE Alu -8 301 4 2139 123 0 0 chr10 104490322 104490622 -41098666 - AluSg SINE Alu -10 300 1 576 187 187 0 chr10 104492716 104492882 -41096406 + MER33 DNA MER1_type 2 198 -126 311 186 0 71 chr10 104492894 104492964 -41096324 + LTR33 LTR ERVL 457 521 0 23 54 0 0 chr10 104492980 104493017 -41096271 + AT_rich Low_complexity Low_complexity 1 37 0 2396 97 0 0 chr10 104493120 104493428 -41095860 + AluSx SINE Alu 1 308 -4 184 333 11 32 chr10 104493918 104494011 -41095277 + MIR3 SINE MIR 3 93 -115 * 278 226 60 24 chr10 104494007 104494091 -41095197 + MIR SINE MIR 126 212 -50 606 242 20 13 chr10 104494477 104494630 -41094658 + MIR SINE MIR 91 244 -18 19591 49 2 1 chr10 104495384 104497910 -41091378 - L1P3 LINE L1 -654 5518 2991 307 269 46 109 chr10 104498353 104498528 -41090760 + L2 LINE L2 3150 3313 0 267 163 20 20 chr10 104498528 104498577 -41090711 + MIR3 SINE MIR 139 187 -21 1206 177 86 111 chr10 104498659 104499065 -41090223 + MSTD LTR MaLR 1 396 0 733 111 77 0 chr10 104499382 104499499 -41089789 - L1MB3 LINE L1 -1 6182 6057 660 291 66 14 chr10 104499800 104500013 -41089275 - MIR SINE MIR -17 245 22 254 326 14 41 chr10 104500321 104500468 -41088820 - MER5A DNA MER1_type 0 189 47 317 286 112 37 chr10 104500631 104500792 -41088496 + L2 LINE L2 3141 3313 0 476 295 88 37 chr10 104501146 104501363 -41087925 - MIR SINE MIR -12 250 23 211 331 185 38 chr10 104501631 104501800 -41087488 + L2 LINE L2 2549 2744 -570 486 207 34 178 chr10 104501800 104501869 -41087419 - MER5B DNA MER1_type 0 178 101 2336 88 10 0 chr10 104501869 104502163 -41087125 - AluSx SINE Alu -13 299 3 486 207 34 178 chr10 104502163 104502301 -41086987 - MER5B DNA MER1_type -77 101 1 342 324 62 55 chr10 104502352 104502526 -41086762 + L2 LINE L2 2830 3008 -264 2517 124 60 36 chr10 104502526 104502944 -41086344 - MSTC LTR MaLR 0 428 1 342 324 62 55 chr10 104502944 104503044 -41086244 + L2 LINE L2 3008 3106 -166 259 269 65 28 chr10 104503457 104503565 -41085723 + LTR16C LTR ERVL 380 491 0 228 296 176 9 chr10 104503569 104503677 -41085611 + MIR SINE MIR 20 145 -63 1939 135 7 3 chr10 104503680 104503977 -41085311 + AluSq SINE Alu 1 298 -15 2676 161 30 0 chr10 104503982 104504449 -41084839 + L1ME1 LINE L1 5322 5802 -376 238 203 0 87 chr10 104504453 104504522 -41084766 + L1ME1 LINE L1 5921 5983 -183 560 299 63 94 chr10 104504701 104505557 -41083731 + L2 LINE L2 2310 3154 -118 646 232 34 34 chr10 104505557 104505734 -41083554 + MER5B DNA MER1_type 2 178 0 560 299 63 94 chr10 104505734 104505832 -41083456 + L2 LINE L2 3154 3254 -18 21 0 0 0 chr10 104505954 104505975 -41083313 + AT_rich Low_complexity Low_complexity 1 21 0 1081 148 40 0 chr10 104506457 104506633 -41082655 - MER5A DNA MER1_type -6 183 1 2708 156 31 35 chr10 104507379 104507891 -41081397 + LTR54 LTR ERV1 1 510 0 558 229 9 0 chr10 104507909 104508014 -41081274 - MER81 DNA DNA -2 112 7 220 235 0 20 chr10 104508293 104508344 -41080944 - L3 LINE CR1 -11 1566 1517 357 206 19 84 chr10 104508359 104508466 -41080822 + MER5B DNA MER1_type 68 167 -11 1413 321 159 25 chr10 104508487 104509436 -41079852 - L3 LINE CR1 -47 1530 455 326 182 9 109 chr10 104509450 104509560 -41079728 + L1MC5 LINE L1 7722 7820 -141 1219 144 77 29 chr10 104509677 104509939 -41079349 + MSTD LTR MaLR 89 394 -2 358 312 81 57 chr10 104509952 104510324 -41078964 - HAL1b LINE L1 -967 381 1 2530 214 106 29 chr10 104511158 104511888 -41077400 - L2 LINE L2 -339 2975 2190 5617 65 0 0 chr10 104512045 104512752 -41076536 - L1P LINE L1 -4041 2105 1399 3148 83 5 5 chr10 104512754 104513175 -41076113 + L1PB4 LINE L1 5340 5760 -391 253 147 0 59 chr10 104513175 104513243 -41076045 - LTR66 LTR ERVL -153 457 394 472 118 65 8 chr10 104513245 104513362 -41075926 + L1PB4 LINE L1 5774 5845 -311 204 163 0 0 chr10 104513386 104513429 -41075859 + (TA)n Simple_repeat Simple_repeat 2 44 0 191 305 21 50 chr10 104514265 104514406 -41074882 - L2 LINE L2 -18 3295 3159 24 0 0 0 chr10 104514530 104514554 -41074734 + GC_rich Low_complexity Low_complexity 1 24 0 756 80 36 18 chr10 104514566 104514678 -41074610 + AluY SINE Alu 52 165 -146 30 0 0 0 chr10 104514886 104514916 -41074372 + AT_rich Low_complexity Low_complexity 1 30 0 2194 126 0 0 chr10 104515303 104515596 -41073692 + AluSx SINE Alu 1 293 -19 2354 85 3 3 chr10 104515616 104515921 -41073367 + AluSq SINE Alu 1 305 -8 326 267 0 11 chr10 104516704 104516794 -41072494 - L2 LINE L2 -1 3312 3224 282 217 0 0 chr10 104517463 104517532 -41071756 + GA-rich Low_complexity Low_complexity 2 70 0 2719 70 32 0 chr10 104518286 104518628 -41070660 + THE1A LTR MaLR 1 353 -2 10407 104 15 18 chr10 104518628 104520097 -41069191 + THE1A-int LTR MaLR 9 1473 -107 995 239 78 4 chr10 104520230 104520485 -41068803 + L1ME3 LINE L1 5864 6137 -25 698 210 5 65 chr10 104520861 104521047 -41068241 + MER5B DNA MER1_type 1 175 -3 392 225 0 22 chr10 104521098 104521187 -41068101 - MER5B DNA MER1_type -2 176 90 514 319 50 8 chr10 104521739 104521975 -41067313 - MIR SINE MIR 0 262 17 687 140 147 20 chr10 104521975 104522125 -41067163 - MER5A DNA MER1_type 0 189 21 303 304 152 29 chr10 104522214 104522385 -41066903 - MIR3 SINE MIR -9 199 8 2308 85 0 3 chr10 104522818 104523111 -41066177 + AluY SINE Alu 1 292 -19 21 0 0 0 chr10 104524008 104524029 -41065259 + AT_rich Low_complexity Low_complexity 1 21 0 191 293 192 0 chr10 104524788 104524887 -41064401 - L2 LINE L2 -214 3058 2941 * 610 195 32 24 chr10 104524883 104525006 -41064282 - L2 LINE L2 -3 3310 3187 507 243 154 6 chr10 104525121 104525290 -41063998 - MIR SINE MIR -13 249 56 193 298 12 24 chr10 104525312 104525396 -41063892 - L2 LINE L2 -493 2821 2739 263 146 18 0 chr10 104526433 104526488 -41062800 + (TGAA)n Simple_repeat Simple_repeat 2 57 0 534 271 81 36 chr10 104526619 104526866 -41062422 - MIR SINE MIR -3 259 2 2062 94 3 38 chr10 104527978 104528266 -41061022 + AluSx SINE Alu 35 312 0 193 229 0 42 chr10 104528337 104528385 -41060903 + L3b LINE CR1 1279 1324 -259 2465 64 0 7 chr10 104528564 104528860 -41060428 + AluSp SINE Alu 1 294 -19 32 0 0 0 chr10 104528894 104528926 -41060362 + AT_rich Low_complexity Low_complexity 1 32 0 241 285 99 20 chr10 104529591 104529742 -41059546 - MLT1L LTR MaLR -9 606 444 2072 202 28 5 chr10 104529795 104530186 -41059102 - L1M3f LINE L1 -4626 702 303 1790 68 0 18 chr10 104530751 104530973 -41058315 + AluY SINE Alu 84 301 -10 238 217 17 17 chr10 104531919 104531979 -41057309 + GA-rich Low_complexity Low_complexity 1 60 0 359 259 298 0 chr10 104533150 104533281 -41056007 - MER5A DNA MER1_type -2 187 18 585 310 94 24 chr10 104634273 104634528 -40954760 - L3 LINE CR1 -357 1220 948 2028 143 3 0 chr10 104634530 104634830 -40954458 - AluJb SINE Alu -11 301 1 1549 188 49 0 chr10 104634948 104635294 -40953994 + L1MC3 LINE L1 7410 7772 -13 992 201 0 16 chr10 104635312 104635501 -40953787 + AluJb SINE Alu 86 271 -41 2131 137 106 3 chr10 104635510 104635896 -40953392 + MSTB LTR MaLR 1 426 0 1889 165 0 0 chr10 104636294 104636579 -40952709 - AluSx SINE Alu -21 291 7 2592 44 0 0 chr10 104642050 104642345 -40946943 - AluY SINE Alu -16 295 1 213 348 45 0 chr10 104644325 104644414 -40944874 + L3 LINE CR1 1484 1576 -1 355 249 267 31 chr10 104644437 104644662 -40944626 + L1MC/D LINE L1 5259 5536 -2272 196 324 118 15 chr10 104644949 104645085 -40944203 - MIR SINE MIR -2 260 111 415 38 0 0 chr10 104647056 104647109 -40942179 - L1PA13 LINE L1 -266 5897 5845 2964 203 64 25 chr10 104647691 104648704 -40940584 - L1ME1 LINE L1 -6 6229 5175 1988 217 62 39 chr10 104648692 104649484 -40939804 - L1ME1 LINE L1 -3647 2568 1806 * 21 0 0 0 chr10 104649572 104649593 -40939695 + AT_rich Low_complexity Low_complexity 1 21 0 741 310 73 12 chr10 104651083 104651328 -40937960 + MIR SINE MIR 2 261 -1 957 202 0 6 chr10 104651331 104651499 -40937789 - AluJb SINE Alu -23 289 123 363 44 0 0 chr10 104651506 104651551 -40937737 + (CA)n Simple_repeat Simple_repeat 2 46 0 41 48 0 0 chr10 104653231 104653293 -40935995 + AT_rich Low_complexity Low_complexity 1 62 0 611 316 27 38 chr10 104653293 104653556 -40935732 + MIR SINE MIR 3 262 0 24 53 0 0 chr10 104653651 104653689 -40935599 + AT_rich Low_complexity Low_complexity 1 38 0 529 176 19 0 chr10 104654091 104654199 -40935089 - MER53 DNA DNA -79 110 1 421 234 132 106 chr10 104654810 104654846 -40934442 - Charlie8 DNA MER1_type -69 272 238 2128 93 3 50 chr10 104654846 104655148 -40934140 - AluSc SINE Alu -21 288 1 421 234 132 106 chr10 104655148 104655376 -40933912 - Charlie8 DNA MER1_type -103 238 1 394 232 104 24 chr10 104656282 104656407 -40932881 + MIR SINE MIR 124 258 -4 2247 95 13 3 chr10 104656485 104656789 -40932499 - AluSq SINE Alu -6 307 1 1468 188 76 0 chr10 104657421 104657537 -40931751 + AluJo SINE Alu 2 108 -204 252 0 0 0 chr10 104657537 104657565 -40931723 + (TAAA)n Simple_repeat Simple_repeat 4 31 0 1468 188 76 0 chr10 104657565 104657724 -40931564 + AluJo SINE Alu 108 298 -14 241 272 111 0 chr10 104657724 104657805 -40931483 + MIR SINE MIR 60 149 -113 289 269 169 31 chr10 104657805 104657965 -40931323 + MIR SINE MIR 68 249 -13 381 310 127 0 chr10 104658265 104658423 -40930865 - MER91B DNA MER1_type -12 178 1 222 128 0 0 chr10 104658487 104658526 -40930762 + (T)n Simple_repeat Simple_repeat 1 39 0 1675 174 16 44 chr10 104658557 104658874 -40930414 - AluJb SINE Alu 0 312 5 401 215 194 42 chr10 104659155 104659299 -40929989 + MER5B DNA MER1_type 13 178 0 180 200 0 0 chr10 104660374 104660414 -40928874 + GA-rich Low_complexity Low_complexity 2 41 0 409 303 98 32 chr10 104660469 104660523 -40928765 + L1ME2 LINE L1 5388 5437 -733 1554 192 0 22 chr10 104660523 104660841 -40928447 + AluJo SINE Alu 2 312 0 409 303 98 32 chr10 104660841 104661188 -40928100 + L1ME2 LINE L1 5437 5828 -342 515 200 0 0 chr10 104661227 104661322 -40927966 + MER5B DNA MER1_type 84 178 0 307 309 11 0 chr10 104661342 104661436 -40927852 + L1ME2 LINE L1 5845 5939 -225 2156 117 7 13 chr10 104661807 104662105 -40927183 + AluSx SINE Alu 1 296 -16 284 330 124 49 chr10 104662425 104662852 -40926436 - L2 LINE L2 -5 3308 2850 785 203 33 16 chr10 104663517 104663699 -40925589 - MER5A DNA MER1_type 0 189 5 276 100 0 0 chr10 104664005 104664045 -40925243 + (TG)n Simple_repeat Simple_repeat 1 40 0 589 159 172 32 chr10 104664140 104664297 -40924991 - MIR SINE MIR 0 262 84 1508 174 62 24 chr10 104664803 104664926 -40924362 + AluJo SINE Alu 6 123 -189 471 60 0 0 chr10 104664926 104664993 -40924295 + (TA)n Simple_repeat Simple_repeat 2 68 0 1508 174 62 24 chr10 104664993 104665157 -40924131 + AluJo SINE Alu 123 304 -8 316 284 203 14 chr10 104665751 104665899 -40923389 + MER5B DNA MER1_type 2 177 -1 341 206 130 22 chr10 104666090 104666182 -40923106 - L2 LINE L2 -42 3271 3170 2377 88 0 0 chr10 104666612 104666909 -40922379 + AluSq SINE Alu 1 297 -16 6597 115 31 10 chr10 104667303 104669013 -40920275 + L1MA2 LINE L1 4532 6283 -21 633 49 0 0 chr10 104669013 104669094 -40920194 + (TA)n Simple_repeat Simple_repeat 1 81 0 6597 115 31 10 chr10 104669094 104669117 -40920171 + L1MA2 LINE L1 6283 6304 0 551 208 33 0 chr10 104669383 104669503 -40919785 + MER2 DNA MER2_type 1 124 -221 2025 154 6 10 chr10 104669571 104669883 -40919405 - AluJo SINE Alu -1 311 1 432 224 0 0 chr10 104669895 104669971 -40919317 + MER2 DNA MER2_type 270 345 0 265 247 37 25 chr10 104669975 104670056 -40919232 + L2 LINE L2 2272 2353 -961 521 110 0 0 chr10 104670372 104670445 -40918843 - MLT1A1 LTR MaLR -47 318 246 398 333 93 29 chr10 104670659 104670863 -40918425 + MIR SINE MIR 46 262 0 462 336 16 8 chr10 104670866 104670991 -40918297 - L2 LINE L2 -32 3240 3115 486 162 101 0 chr10 104671357 104671456 -40917832 + MIR SINE MIR 126 234 -28 649 256 6 41 chr10 104672091 104672282 -40917006 + MER5A DNA MER1_type 1 174 -4 593 273 83 67 chr10 104673601 104673901 -40915387 - L2 LINE L2 -1 3312 3008 545 278 129 45 chr10 104673914 104674089 -40915199 - MLT1J LTR MaLR -8 503 344 1049 169 16 6 chr10 104674089 104674272 -40915016 - MER5A DNA MER1_type 0 189 5 545 278 129 45 chr10 104674272 104674560 -40914728 - MLT1J LTR MaLR -167 344 1 441 290 278 4 chr10 104674560 104674798 -40914490 - L2 LINE L2 -307 3006 2716 3998 229 64 53 chr10 104675346 104675478 -40913810 - L1MDb LINE L1 -3497 3043 2914 1511 128 0 0 chr10 104675478 104675681 -40913607 - AluSg/x SINE Alu -21 289 87 3998 229 64 53 chr10 104675681 104675993 -40913295 - L1MDb LINE L1 -3626 2914 2607 2224 108 0 3 chr10 104675993 104676288 -40913000 - AluSc SINE Alu -15 294 1 3998 229 64 53 chr10 104676288 104677022 -40912266 - L1MDb LINE L1 -3933 2607 1883 2234 125 18 0 chr10 104677022 104677365 -40911923 - L1PA16 LINE L1 -9 6157 5809 3998 229 64 53 chr10 104677365 104677537 -40911751 - L1MDb LINE L1 -4657 1883 1714 2039 144 0 0 chr10 104677537 104677828 -40911460 - AluSx SINE Alu -21 291 1 3998 229 64 53 chr10 104677828 104678628 -40910660 - L1MDb LINE L1 -4826 1714 909 310 273 119 42 chr10 104679117 104679260 -40910028 - L1MDb LINE L1 -6203 337 184 301 271 42 0 chr10 104679288 104679384 -40909904 - L1ME LINE L1 -5923 147 48 284 79 0 0 chr10 104679412 104679450 -40909838 - MLT2C1 LTR ERVL -7 390 353 332 289 0 8 chr10 104679451 104679572 -40909716 + (TA)n Simple_repeat Simple_repeat 2 121 0 1422 193 106 53 chr10 104679572 104679987 -40909301 - MLT2B1 LTR ERVL -83 437 1 333 371 16 0 chr10 104680189 104680313 -40908975 - L2 LINE L2 -596 2718 2593 270 317 78 0 chr10 104680408 104680550 -40908738 + L1MC4a LINE L1 5786 5938 -1870 303 28 0 0 chr10 104680559 104680595 -40908693 + (TA)n Simple_repeat Simple_repeat 2 37 0 238 305 128 28 chr10 104680989 104681130 -40908158 + L2 LINE L2 2851 3005 -308 469 277 167 43 chr10 104681245 104681388 -40907900 + L2 LINE L2 2907 3031 -282 2299 111 0 0 chr10 104681388 104681694 -40907594 - AluSx SINE Alu -6 306 1 469 277 167 43 chr10 104681694 104681832 -40907456 + L2 LINE L2 3031 3223 -90 477 241 86 40 chr10 104684827 104685001 -40904287 + MIR SINE MIR 60 241 -21 21 0 0 0 chr10 104685708 104685729 -40903559 + AT_rich Low_complexity Low_complexity 1 21 0 581 80 0 0 chr10 104685840 104685915 -40903373 - AluS SINE Alu -238 75 1 233 383 106 0 chr10 104686464 104686558 -40902730 - L2 LINE L2 -5 3308 3205 184 348 147 11 chr10 104687018 104687202 -40902086 + L2 LINE L2 3047 3255 -17 1571 170 47 4 chr10 104687345 104687621 -40901667 + AluJb SINE Alu 1 288 -24 5204 59 15 3 chr10 104687755 104688428 -40900860 - L1PA11 LINE L1 -2 6172 5492 4121 167 49 23 chr10 104688428 104689072 -40900216 - L1MB3 LINE L1 -24 6159 5471 225 0 0 0 chr10 104689072 104689097 -40900191 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 4121 167 49 23 chr10 104689097 104689452 -40899836 - L1MB3 LINE L1 -712 5471 5127 210 71 0 0 chr10 104689452 104689480 -40899808 + (T)n Simple_repeat Simple_repeat 1 28 0 297 239 11 11 chr10 104689523 104689611 -40899677 - L1P LINE L1 -2455 3691 3604 23 0 0 0 chr10 104690488 104690511 -40898777 + AT_rich Low_complexity Low_complexity 1 23 0 293 277 45 114 chr10 104690581 104690783 -40898505 + MER5A DNA MER1_type 2 189 0 1016 201 14 32 chr10 104690791 104691010 -40898278 + MER20 DNA MER1_type 1 215 -4 336 278 92 99 chr10 104693360 104694003 -40895285 - L1M4 LINE L1 -2746 3400 2763 2148 80 7 7 chr10 104694489 104694790 -40894498 - L1PA13 LINE L1 0 6163 5863 2299 99 0 7 chr10 104695069 104695373 -40893915 + AluSq SINE Alu 1 302 -11 2422 150 10 5 chr10 104696260 104696673 -40892615 + L1MC1 LINE L1 5919 6333 0 1789 130 27 20 chr10 104698246 104698539 -40890749 - AluSp SINE Alu -18 295 1 2004 147 7 7 chr10 104698743 104699049 -40890239 - AluSx SINE Alu -6 306 1 352 331 71 19 chr10 104699055 104699209 -40890079 + L2 LINE L2 2838 2999 -273 2258 123 0 0 chr10 104699822 104700131 -40889157 + AluSx SINE Alu 1 309 -3 197 308 66 22 chr10 104700401 104700492 -40888796 + MIR SINE MIR 117 211 -51 1877 114 59 0 chr10 104701038 104701329 -40887959 - AluSx SINE Alu 0 312 1 204 278 0 0 chr10 104701595 104701667 -40887621 + GA-rich Low_complexity Low_complexity 1 72 0 514 258 98 40 chr10 104705162 104705387 -40883901 + MIR SINE MIR 12 249 -13 29 0 0 0 chr10 104705423 104705452 -40883836 + AT_rich Low_complexity Low_complexity 1 29 0 333 0 0 0 chr10 104705941 104705978 -40883310 + (CA)n Simple_repeat Simple_repeat 2 38 0 249 159 0 0 chr10 104706343 104706387 -40882901 + (CTA)n Simple_repeat Simple_repeat 3 46 0 494 195 49 32 chr10 104706387 104706510 -40882778 - MIR SINE MIR -2 260 136 824 124 44 7 chr10 104706674 104706811 -40882477 + L1MB8 LINE L1 5538 5679 -499 885 181 0 11 chr10 104706813 104706990 -40882298 + L1MB8 LINE L1 6003 6177 -1 519 259 173 5 chr10 104707063 104707248 -40882040 + MIR SINE MIR 47 262 0 504 219 0 10 chr10 104707303 104707399 -40881889 + MER5B DNA MER1_type 1 95 -83 477 355 190 7 chr10 104707895 104708348 -40880940 + L2 LINE L2 1829 2364 -950 21 0 0 0 chr10 104708979 104709000 -40880288 + AT_rich Low_complexity Low_complexity 1 21 0 1301 139 76 99 chr10 104709235 104709617 -40879671 - L1MC/D LINE L1 -2406 5636 5264 225 132 0 0 chr10 104709620 104709658 -40879630 + (TA)n Simple_repeat Simple_repeat 2 39 0 2021 146 10 0 chr10 104710223 104710518 -40878770 - AluSx SINE Alu -14 298 1 1834 179 3 3 chr10 104710951 104711247 -40878041 + AluJb SINE Alu 1 296 -16 691 269 107 58 chr10 104712005 104712327 -40876961 - L1M4 LINE L1 -2271 4111 3806 1037 168 16 0 chr10 104712327 104712512 -40876776 - MER5A DNA MER1_type -1 188 1 691 269 107 58 chr10 104712512 104712947 -40876341 - L1M4 LINE L1 -2576 3806 3317 * 1384 162 52 3 chr10 104712939 104713247 -40876041 - L1M4 LINE L1 -5089 1295 973 1930 165 0 3 chr10 104713257 104713554 -40875734 - AluSx SINE Alu -16 296 1 4928 134 14 42 chr10 104713573 104713902 -40875386 - L1M3d LINE L1 -4902 1401 1064 2414 108 0 0 chr10 104713902 104714209 -40875079 + AluSx SINE Alu 1 307 -5 4928 134 14 42 chr10 104714209 104714787 -40874501 - L1M3d LINE L1 -5239 1064 113 1312 151 0 5 chr10 104714899 104715111 -40874177 - MER2 DNA MER2_type -134 211 1 491 189 9 27 chr10 104715112 104715223 -40874065 - L1M3d LINE L1 -6271 113 5 391 297 35 87 chr10 104715209 104715728 -40873560 - L1MEd LINE L1 -5159 960 469 * 193 352 83 19 chr10 104716150 104716258 -40873030 + L2 LINE L2 3155 3269 -3 258 316 38 21 chr10 104716989 104717226 -40872062 + L1ME LINE L1 4475 4715 -1431 22 0 0 0 chr10 104717241 104717263 -40872025 + AT_rich Low_complexity Low_complexity 1 22 0 279 293 20 0 chr10 104717504 104717603 -40871685 + (CATATA)n Simple_repeat Simple_repeat 4 104 0 368 225 11 22 chr10 104717754 104717843 -40871445 + MLT1L LTR MaLR 170 257 -358 520 271 73 10 chr10 104717962 104718154 -40871134 + MLT1L LTR MaLR 410 613 -2 1278 200 69 14 chr10 104718262 104718537 -40870751 + AluJo SINE Alu 2 291 -21 667 275 49 20 chr10 104718717 104719022 -40870266 + L1ME LINE L1 5485 5798 -323 844 153 0 0 chr10 104719083 104719207 -40870081 + FLAM_A SINE Alu 1 124 -9 1637 180 39 7 chr10 104720311 104720595 -40868693 + AluJb SINE Alu 1 293 -19 2216 114 3 0 chr10 104720644 104720941 -40868347 + AluSx SINE Alu 1 298 -14 23 33 0 0 chr10 104721329 104721359 -40867929 + AT_rich Low_complexity Low_complexity 1 30 0 7443 20 0 0 chr10 104722094 104723633 -40865655 - L1HS LINE L1 -2 6153 4615 1237 97 0 40 chr10 104723995 104724170 -40865118 - AluSc SINE Alu -10 299 132 1237 131 6 0 chr10 104724275 104724451 -40864837 + AluSg/x SINE Alu 122 298 -14 288 0 0 0 chr10 104724451 104724483 -40864805 + (TA)n Simple_repeat Simple_repeat 2 33 0 311 235 265 0 chr10 104725126 104725228 -40864060 + L3 LINE CR1 517 645 -932 501 327 149 21 chr10 104725252 104725483 -40863805 + L3 LINE CR1 1130 1405 -172 2350 105 3 0 chr10 104725483 104725788 -40863500 + AluSq SINE Alu 2 307 -6 501 327 149 21 chr10 104725788 104725837 -40863451 + L3 LINE CR1 1405 1446 -131 989 208 108 41 chr10 104726344 104726686 -40862602 - MLT1A1 LTR MaLR 0 365 1 202 289 62 70 chr10 104727470 104727598 -40861690 - L2 LINE L2 -40 3273 3147 253 292 38 38 chr10 104727673 104727909 -40861379 + L1ME LINE L1 535 770 -5300 24 0 0 0 chr10 104728689 104728713 -40860575 + AT_rich Low_complexity Low_complexity 1 24 0 226 277 9 18 chr10 104729065 104729177 -40860111 + L1ME LINE L1 892 1002 -5081 4361 163 53 19 chr10 104729238 104730653 -40858635 - L1MB1 LINE L1 -2 6166 4710 352 322 116 0 chr10 104730844 104731077 -40858211 + L1 LINE L1 4334 4593 -1553 271 303 73 18 chr10 104731143 104731361 -40857927 + L1 LINE L1 4733 4962 -1184 927 154 0 7 chr10 104731385 104731521 -40857767 + AluJo SINE Alu 1 135 -177 1690 185 3 22 chr10 104731521 104731834 -40857454 + AluJo SINE Alu 1 307 -5 2054 123 41 0 chr10 104731915 104732207 -40857081 + AluSx SINE Alu 1 304 -8 24 32 0 0 chr10 104732216 104732247 -40857041 + AT_rich Low_complexity Low_complexity 1 31 0 347 111 111 25 chr10 104732347 104732428 -40856860 + L1ME4a LINE L1 5313 5400 -2408 731 248 74 15 chr10 104732434 104732704 -40856584 + L1ME4a LINE L1 5477 5762 -2046 22 0 0 0 chr10 104732839 104732861 -40856427 + AT_rich Low_complexity Low_complexity 1 22 0 2138 110 10 7 chr10 104732905 104733205 -40856083 + AluSx SINE Alu 1 301 -11 1937 143 3 33 chr10 104733243 104733550 -40855738 + AluSx SINE Alu 1 298 -14 239 307 41 0 chr10 104733813 104734026 -40855262 - L1MC/D LINE L1 -710 5444 5297 321 50 0 117 chr10 104734164 104734224 -40855064 - Alu SINE Alu -4 298 246 2120 104 28 0 chr10 104734361 104734648 -40854640 + AluSg SINE Alu 1 295 -15 2426 85 0 0 chr10 104734826 104735132 -40854156 + AluY SINE Alu 1 306 -5 216 43 43 43 chr10 104735156 104735203 -40854085 + (CAAAA)n Simple_repeat Simple_repeat 3 49 0 182 232 32 126 chr10 104735343 104735438 -40853850 + MER5B DNA MER1_type 69 154 -24 * 294 354 9 26 chr10 104735356 104735469 -40853819 - MER5A DNA MER1_type -75 114 4 200 268 84 42 chr10 104735809 104735880 -40853408 - L2 LINE L2 -5 3267 3194 341 239 58 14 chr10 104736430 104736568 -40852720 + L1ME4a LINE L1 5974 6117 -4 852 207 81 77 chr10 104737021 104737344 -40851944 - L1ME1 LINE L1 -5 6161 5838 193 254 15 60 chr10 104737489 104737556 -40851732 - L2 LINE L2 -1 3312 3249 372 205 36 0 chr10 104737839 104737922 -40851366 - MLT1L LTR MaLR -332 283 198 330 285 89 34 chr10 104739604 104739783 -40849505 - MER5A DNA MER1_type 0 189 1 670 228 148 84 chr10 104740066 104740251 -40849037 + MLT1L LTR MaLR 19 191 -424 1416 185 84 35 chr10 104740251 104740538 -40848750 + AluJo SINE Alu 1 301 -11 670 228 148 84 chr10 104740538 104740913 -40848375 + MLT1L LTR MaLR 191 615 0 189 196 0 0 chr10 104741026 104741072 -40848216 + (CA)n Simple_repeat Simple_repeat 2 47 0 608 275 21 21 chr10 104741786 104742019 -40847269 + LTR16A LTR ERVL 218 450 0 231 195 0 0 chr10 104742485 104742526 -40846762 + (CATA)n Simple_repeat Simple_repeat 2 42 0 256 283 145 33 chr10 104742663 104742815 -40846473 + L2 LINE L2 2562 2730 -584 * 329 342 96 10 chr10 104742805 104743004 -40846284 + L2 LINE L2 2838 3053 -219 195 290 166 47 chr10 104743130 104743299 -40845989 + L2 LINE L2 3120 3308 -5 2264 115 0 0 chr10 104744038 104744334 -40844954 + AluSx SINE Alu 1 296 -16 213 340 0 0 chr10 104744500 104744550 -40844738 + L2 LINE L2 3246 3295 -18 575 303 100 64 chr10 104744556 104745354 -40843934 - L2 LINE L2 -1199 2115 1289 1977 124 7 0 chr10 104745711 104746016 -40843272 + AluSx SINE Alu 1 307 0 1556 149 37 123 chr10 104746054 104746429 -40842859 + MER7A DNA MER2_type 4 344 -2 354 279 155 0 chr10 104747216 104747345 -40841943 + MIR SINE MIR 114 262 0 338 344 118 18 chr10 104747453 104747782 -40841506 - L2 LINE L2 -2357 957 596 1658 175 14 7 chr10 104748180 104748460 -40840828 - AluJo SINE Alu -30 282 1 1862 129 54 7 chr10 104748686 104748981 -40840307 + AluSq SINE Alu 1 309 -4 1428 152 176 0 chr10 104750949 104751245 -40838043 + MER7A DNA MER2_type 1 346 0 1770 165 14 3 chr10 104751315 104751612 -40837676 + AluJb SINE Alu 1 300 -12 378 316 10 0 chr10 104751627 104751725 -40837563 - L2 LINE L2 -5 3267 3169 22 0 0 0 chr10 104751743 104751765 -40837523 + AT_rich Low_complexity Low_complexity 1 22 0 394 195 168 18 chr10 104751885 104751998 -40837290 + HsTC2 DNA Tc2 8 137 -1761 249 243 29 14 chr10 104752006 104752076 -40837212 + HsTC2 DNA Tc2 1286 1356 -542 830 113 0 57 chr10 104752082 104752223 -40837065 - FLAM_C SINE Alu 0 133 1 328 293 85 19 chr10 104752262 104752368 -40836920 - MIR3 SINE MIR -51 157 45 474 297 45 7 chr10 104752477 104752632 -40836656 + MIR SINE MIR 99 259 -3 695 169 40 0 chr10 104754416 104754540 -40834748 - FLAM_A SINE Alu -4 129 1 37 23 0 0 chr10 104755033 104755077 -40834211 + AT_rich Low_complexity Low_complexity 1 44 0 29 28 0 0 chr10 104756052 104756088 -40833200 + AT_rich Low_complexity Low_complexity 1 36 0 186 43 0 0 chr10 104756298 104756321 -40832967 + (TG)n Simple_repeat Simple_repeat 2 24 0 441 214 34 0 chr10 104756637 104756754 -40832534 + L1MC2 LINE L1 5159 5279 -867 2282 82 0 3 chr10 104756775 104757066 -40832222 + AluY SINE Alu 1 290 -21 234 0 0 0 chr10 104757079 104757105 -40832183 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 180 0 0 0 chr10 104757673 104757693 -40831595 + (A)n Simple_repeat Simple_repeat 1 20 0 892 183 19 10 chr10 104758035 104758241 -40831047 + L1MC2 LINE L1 5717 5929 -240 1388 163 28 52 chr10 104758241 104758340 -40830948 + MLT2D LTR ERVL 1 101 -313 1731 98 132 0 chr10 104758340 104758605 -40830683 - AluSx SINE Alu -2 300 1 1388 163 28 52 chr10 104758605 104758830 -40830458 + MLT2D LTR ERVL 101 317 -97 2342 59 21 0 chr10 104759159 104759449 -40829839 - AluY SINE Alu -15 296 1 584 325 62 9 chr10 104759508 104759846 -40829442 - L1M4 LINE L1 -3680 2466 2111 26 64 0 0 chr10 104763398 104763445 -40825843 + AT_rich Low_complexity Low_complexity 1 47 0 727 272 52 67 chr10 104764226 104764667 -40824621 + L2 LINE L2 2826 3313 0 187 328 42 34 chr10 104765433 104765552 -40823736 - MIR SINE MIR -70 192 73 275 275 165 9 chr10 104765781 104765890 -40823398 - L2 LINE L2 0 3272 3147 776 256 101 9 chr10 104766866 104767093 -40822195 + MIR SINE MIR 14 261 -1 2219 113 0 3 chr10 104767432 104767724 -40821564 - AluSg SINE Alu -19 291 1 1540 151 37 60 chr10 104767871 104768169 -40821119 - AluJo SINE Alu -21 291 1 579 167 9 0 chr10 104769200 104769314 -40819974 - L1MB8 LINE L1 0 6178 6064 691 82 82 0 chr10 104769314 104769422 -40819866 + L1MB4 LINE L1 6056 6174 -6 398 108 15 0 chr10 104769662 104769727 -40819561 + (GGGA)n Simple_repeat Simple_repeat 3 68 0 248 0 0 30 chr10 104769906 104769939 -40819349 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2258 87 0 26 chr10 104770610 104770920 -40818368 + AluSc SINE Alu 1 302 -7 22 35 0 0 chr10 104771409 104771438 -40817850 + AT_rich Low_complexity Low_complexity 1 29 0 279 337 35 0 chr10 104771885 104771971 -40817317 - L2 LINE L2 -16 3256 3168 2092 132 3 0 chr10 104772259 104772570 -40816718 - AluSx SINE Alu 0 312 1 24 0 0 0 chr10 104773058 104773082 -40816206 + AT_rich Low_complexity Low_complexity 1 24 0 803 186 6 11 chr10 104774024 104774201 -40815087 - L1 LINE L1 -1477 4669 4494 1892 255 100 28 chr10 104774216 104774572 -40814716 + L1ME3 LINE L1 4839 5168 -994 2778 115 16 48 chr10 104774572 104775014 -40814274 + MSTA LTR MaLR 1 428 0 1892 255 100 28 chr10 104775014 104775723 -40813565 + L1ME3 LINE L1 5168 5986 -176 448 225 9 0 chr10 104775765 104775876 -40813412 - L1ME4a LINE L1 -216 5905 5794 189 159 0 0 chr10 104776478 104776522 -40812766 + CT-rich Low_complexity Low_complexity 2 45 0 892 269 109 16 chr10 104778116 104778491 -40810797 - LTR16B LTR ERVL -16 448 39 361 176 40 14 chr10 104779013 104779087 -40810201 - MER81 DNA DNA 0 114 39 1213 192 22 111 chr10 104779293 104779699 -40809589 - MLT1A2 LTR MaLR 0 374 5 749 279 52 47 chr10 104780384 104780793 -40808495 - MLT1J LTR MaLR -6 505 47 415 226 128 0 chr10 104780793 104780895 -40808393 + MER58A DNA MER1_type 1 115 0 2862 171 59 5 chr10 104780912 104781509 -40807779 - L1MB7 LINE L1 -16 6168 5540 24 0 0 0 chr10 104781544 104781568 -40807720 + AT_rich Low_complexity Low_complexity 1 24 0 289 237 1 98 chr10 104781648 104781689 -40807599 + MLT1K LTR MaLR 500 543 -45 2356 96 3 0 chr10 104781689 104781990 -40807298 - AluSx SINE Alu -10 302 1 289 237 1 98 chr10 104781990 104782066 -40807222 + MLT1K LTR MaLR 543 588 0 833 310 72 21 chr10 104782169 104782543 -40806745 + MLT1J2 LTR MaLR 1 393 -57 1014 192 10 0 chr10 104783340 104783533 -40805755 + LTR41 LTR ERVL 1 195 -578 918 246 84 16 chr10 104784028 104784454 -40804834 - L1M4 LINE L1 -1592 4554 4100 1622 81 0 24 chr10 104784463 104784672 -40804616 + AluSg SINE Alu 2 205 -105 1746 189 26 7 chr10 104784679 104784985 -40804303 - AluJo SINE Alu 0 312 1 267 274 0 24 chr10 104785627 104785711 -40803577 - L1ME4a LINE L1 -2016 5792 5711 185 281 35 0 chr10 104785736 104785793 -40803495 - L2 LINE L2 -1 3312 3254 203 231 75 88 chr10 104785824 104785971 -40803317 - L2 LINE L2 -124 3189 3045 1308 174 19 80 chr10 104785974 104786285 -40803003 + AluJo SINE Alu 9 300 -12 805 54 0 36 chr10 104786285 104786396 -40802892 + AluY SINE Alu 205 311 0 255 328 145 0 chr10 104786431 104786562 -40802726 - L2 LINE L2 -281 3032 2883 612 241 46 11 chr10 104786562 104786736 -40802552 - LTR67 LTR ERVL 0 557 378 847 266 26 4 chr10 104786746 104786972 -40802316 - LTR67 LTR ERVL 0 557 327 1682 166 4 4 chr10 104787178 104787443 -40801845 - AluJo SINE Alu -23 289 25 273 343 39 15 chr10 104787478 104787615 -40801673 + MIR3 SINE MIR 15 157 -51 299 257 53 9 chr10 104787626 104787739 -40801549 + MLT1J LTR MaLR 8 125 -386 1121 249 59 14 chr10 104787746 104788104 -40801184 + HsTC2 DNA Tc2 1278 1827 -71 1204 125 11 0 chr10 104788132 104788308 -40800980 + L1PA16 LINE L1 5771 5948 -218 977 141 37 0 chr10 104788447 104788610 -40800678 + L1PA16 LINE L1 5952 6120 -46 1302 174 0 42 chr10 104788610 104788851 -40800437 + AluJo SINE Alu 52 282 -30 1406 299 123 52 chr10 104788856 104789640 -40799648 + L1M4 LINE L1 2758 3671 -2475 2145 130 0 19 chr10 104789640 104789955 -40799333 + AluSx SINE Alu 1 309 -3 1406 299 123 52 chr10 104789955 104790459 -40798829 + L1M4 LINE L1 3671 4138 -2008 1699 137 4 4 chr10 104790500 104790756 -40798532 - AluSx SINE Alu -56 256 1 3195 185 22 35 chr10 104790756 104792104 -40797184 - L1MC3 LINE L1 -760 5369 4545 10764 162 13 32 chr10 104792115 104793171 -40796117 - L1P LINE L1 -1201 4945 3949 4171 114 9 3 chr10 104793171 104793802 -40795486 - MER41B LTR ERV1 0 635 1 10764 162 13 32 chr10 104793802 104794873 -40794415 - L1P LINE L1 -2197 3949 2859 204 179 0 0 chr10 104794873 104794912 -40794376 + T-rich Low_complexity Low_complexity 1 39 0 305 262 0 0 chr10 104795086 104795189 -40794099 - L1P LINE L1 -3273 2873 2771 * 2343 231 23 8 chr10 104795188 104795791 -40793497 - L1MC3 LINE L1 -1763 4366 3755 424 316 65 13 chr10 104795776 104796086 -40793202 - L1MC3 LINE L1 -4898 1221 896 * 274 229 112 67 chr10 104796640 104796863 -40792425 + L1MCc LINE L1 1263 1495 -4928 1028 290 81 36 chr10 104796887 104797704 -40791584 + L1M3de LINE L1 1010 1809 -4587 288 269 194 16 chr10 104797739 104797981 -40791307 + L1MCc LINE L1 2609 2893 -4229 320 206 29 98 chr10 104797997 104798208 -40791080 + L1MEc LINE L1 1130 1483 -4943 1906 245 15 2 chr10 104798216 104798628 -40790660 + MLT1F LTR MaLR 2 418 -124 820 29 29 10 chr10 104798629 104798732 -40790556 + U6 snRNA snRNA 3 107 0 546 204 21 35 chr10 104798996 104799138 -40790150 + MLT1F LTR MaLR 403 542 0 550 280 65 45 chr10 104799141 104799610 -40789678 + MLT1F-int LTR MaLR 3 599 -772 468 286 80 125 chr10 104799813 104800515 -40788773 + MLT1F-int LTR MaLR 701 1370 -1 1803 248 108 7 chr10 104800516 104800952 -40788336 + MLT1F LTR MaLR 1 480 -62 732 168 40 0 chr10 104800953 104801078 -40788210 - FLAM_A SINE Alu -12 130 1 310 149 14 40 chr10 104801080 104801154 -40788134 + MLT1F LTR MaLR 494 565 -2 501 260 94 61 chr10 104801223 104802042 -40787246 + L1MEc LINE L1 1571 2482 -4125 2108 238 60 59 chr10 104802083 104803192 -40786096 + L1MEc LINE L1 2497 3606 -2820 22 0 0 0 chr10 104803314 104803336 -40785952 + AT_rich Low_complexity Low_complexity 1 22 0 2838 3 0 0 chr10 104803600 104803906 -40785382 + AluYa5 SINE Alu 1 306 -5 302 336 43 5 chr10 104804226 104804437 -40784851 - L1MEc LINE L1 -3526 2689 2471 1458 147 77 5 chr10 104804520 104804797 -40784491 + LTR45B LTR ERV1 3 338 -151 288 109 4 10 chr10 104804797 104805060 -40784228 + AluJo SINE Alu 1 325 0 395 236 56 62 chr10 104805060 104805221 -40784067 + LTR45B LTR ERV1 329 488 -1 330 275 120 59 chr10 104805224 104805560 -40783728 - L1MEc LINE L1 -3822 2393 2077 2112 112 14 0 chr10 104805630 104805926 -40783362 - AluSx SINE Alu 0 312 13 515 352 68 33 chr10 104806120 104806518 -40782770 - HAL1 LINE L1 -744 1763 1352 1750 94 91 3 chr10 104806579 104806866 -40782422 - L1MA2 LINE L1 0 6304 5993 373 301 75 24 chr10 104806876 104807168 -40782120 - L1MEc LINE L1 -4906 1299 993 231 36 0 0 chr10 104807414 104807442 -40781846 + (TTCC)n Simple_repeat Simple_repeat 4 31 0 262 200 0 22 chr10 104807443 104807477 -40781811 + CT-rich Low_complexity Low_complexity 1 34 -54 2347 84 0 7 chr10 104807477 104807785 -40781503 - AluSg1 SINE Alu -1 308 3 262 200 0 22 chr10 104807785 104807840 -40781448 + CT-rich Low_complexity Low_complexity 34 88 0 1197 262 164 19 chr10 104807988 104808523 -40780765 - HAL1 LINE L1 -677 1830 1218 750 199 12 18 chr10 104808502 104808672 -40780616 - L1ME LINE L1 -360 5761 5600 * 4543 127 8 36 chr10 104808669 104809357 -40779931 - L1M4 LINE L1 -3834 2548 1842 2217 102 3 0 chr10 104809357 104809651 -40779637 + AluSg SINE Alu 2 296 -14 4543 127 8 36 chr10 104809651 104809672 -40779616 - L1M4 LINE L1 -4540 1842 1822 1891 148 7 7 chr10 104809672 104809975 -40779313 + AluJb SINE Alu 1 303 -9 4543 127 8 36 chr10 104809975 104810126 -40779162 - L1M4 LINE L1 -4560 1822 1711 3825 166 70 38 chr10 104810112 104810974 -40778314 - L1M4 LINE L1 -5493 891 3 * 27 0 0 0 chr10 104811053 104811080 -40778208 + AT_rich Low_complexity Low_complexity 1 27 0 1199 165 84 48 chr10 104811445 104811838 -40777450 - L1MC5 LINE L1 -214 7747 7341 398 273 31 43 chr10 104812258 104812419 -40776869 - HAL1 LINE L1 -1007 1500 1342 247 208 38 19 chr10 104813189 104813242 -40776046 + L2 LINE L2 3215 3268 -4 376 183 0 0 chr10 104813763 104813823 -40775465 - FLAM_A SINE Alu -72 60 1 200 262 0 0 chr10 104813875 104813917 -40775371 + (CACCAT)n Simple_repeat Simple_repeat 4 45 0 21 0 0 0 chr10 104814419 104814440 -40774848 + AT_rich Low_complexity Low_complexity 1 21 0 31 0 0 0 chr10 104815048 104815079 -40774209 + AT_rich Low_complexity Low_complexity 1 31 0 203 179 0 0 chr10 104818348 104818387 -40770901 + T-rich Low_complexity Low_complexity 1 39 0 1038 149 108 50 chr10 104818639 104818861 -40770427 + MER46A DNA MER2_type 2 236 0 1136 150 73 64 chr10 104819908 104820102 -40769186 + MER46A DNA MER2_type 2 201 -2530 2068 115 0 10 chr10 104820102 104820414 -40768874 - AluSx SINE Alu 0 309 1 1136 150 73 64 chr10 104820414 104820451 -40768837 + MER46A DNA MER2_type 201 236 0 262 313 280 12 chr10 104820833 104821076 -40768212 + MLT1K LTR MaLR 56 363 -225 180 245 38 19 chr10 104821427 104821480 -40767808 - L2 LINE L2 -1 3271 3218 754 127 0 25 chr10 104822430 104822548 -40766740 + FLAM_C SINE Alu 13 127 -16 1236 153 66 0 chr10 104822760 104822956 -40766332 - MER58A DNA MER1_type -4 220 12 3506 295 115 17 chr10 104822958 104824615 -40764673 + L2 LINE L2 1432 3262 -51 1163 306 34 52 chr10 104824624 104825157 -40764131 - L2 LINE L2 -28 3285 2744 1821 136 96 38 chr10 104825157 104825502 -40763786 + MLT1A1 LTR MaLR 1 365 0 1163 306 34 52 chr10 104825502 104825732 -40763556 - L2 LINE L2 -569 2744 2540 2228 111 3 0 chr10 104825732 104826038 -40763250 - AluSp SINE Alu -6 307 1 1163 306 34 52 chr10 104826038 104826179 -40763109 - L2 LINE L2 -773 2540 2398 1681 171 0 46 chr10 104826529 104826833 -40762455 + AluJb SINE Alu 2 291 -21 22 0 0 0 chr10 104827448 104827470 -40761818 + AT_rich Low_complexity Low_complexity 1 22 0 1668 179 26 13 chr10 104827614 104827922 -40761366 - AluJb SINE Alu 0 312 1 450 0 0 0 chr10 104828186 104828236 -40761052 + (TG)n Simple_repeat Simple_repeat 2 51 0 2170 111 0 7 chr10 104828682 104828988 -40760300 - AluSx SINE Alu -8 304 1 1962 158 3 0 chr10 104829869 104830166 -40759122 - AluJb SINE Alu -14 298 1 24 0 0 0 chr10 104830176 104830200 -40759088 + AT_rich Low_complexity Low_complexity 1 24 0 329 279 67 94 chr10 104830412 104830709 -40758579 + L1M4 LINE L1 3409 3697 -2449 2286 86 0 0 chr10 104830945 104831248 -40758040 - AluSx SINE Alu 0 305 3 410 297 128 28 chr10 104831985 104832425 -40756863 - L1MC/D LINE L1 -449 5672 5381 2032 245 124 44 chr10 104833242 104834038 -40755250 - HAL1 LINE L1 -672 1835 938 2362 75 3 3 chr10 104834038 104834332 -40754956 + AluSp SINE Alu 1 294 -19 2032 245 124 44 chr10 104834332 104834556 -40754732 - HAL1 LINE L1 -1569 938 733 1029 200 141 24 chr10 104834575 104834606 -40754682 - MER5C DNA MER1_type 0 324 298 2451 59 0 0 chr10 104834606 104834895 -40754393 - AluY SINE Alu -22 289 1 1029 200 141 24 chr10 104834895 104835153 -40754135 - MER5C DNA MER1_type -26 298 1 953 273 166 14 chr10 104835189 104835617 -40753671 - HAL1 LINE L1 -1912 595 103 294 312 92 12 chr10 104835735 104835908 -40753380 - HAL1 LINE L1 -823 1684 1498 2360 77 0 32 chr10 104835923 104836233 -40753055 + AluY SINE Alu 1 300 -11 2221 113 0 19 chr10 104836615 104836933 -40752355 - AluSx SINE Alu 0 312 1 1805 166 7 3 chr10 104837910 104838199 -40751089 + AluJb SINE Alu 1 290 -22 2831 165 24 80 chr10 104838390 104838440 -40750848 - MLT2B3 LTR ERVL 0 554 503 1777 179 52 0 chr10 104838440 104838770 -40750518 - MER7A DNA MER2_type 0 346 2 2831 165 24 80 chr10 104838770 104839306 -40749982 - MLT2B3 LTR ERVL -51 503 1 1314 122 0 24 chr10 104840013 104840218 -40749070 + AluJb SINE Alu 85 284 -28 439 199 20 20 chr10 104840221 104840367 -40748921 + CT-rich Low_complexity Low_complexity 3 148 0 622 169 28 70 chr10 104841122 104841264 -40748024 - MIR SINE MIR -56 206 71 521 193 123 18 chr10 104841796 104841910 -40747378 - MIR SINE MIR -67 141 16 914 231 74 5 chr10 104849480 104849683 -40739605 - MER58A DNA MER1_type -2 222 6 1727 151 61 0 chr10 104851007 104851286 -40738002 - AluSx SINE Alu -16 296 1 218 196 0 0 chr10 104851334 104851385 -40737903 + A-rich Low_complexity Low_complexity 2 52 0 2533 194 37 62 chr10 104851675 104852237 -40737051 - MLT2B3 LTR ERVL -6 548 1 1216 182 112 85 chr10 104852237 104852367 -40736921 + L1M4b LINE L1 980 1105 -5750 2144 99 7 0 chr10 104852367 104852659 -40736629 + AluY SINE Alu 1 294 -17 1216 182 112 85 chr10 104852659 104853058 -40736230 + L1M4b LINE L1 1105 1531 -5324 1947 114 32 0 chr10 104853058 104853339 -40735949 + AluSx SINE Alu 1 290 -22 1216 182 112 85 chr10 104853339 104853601 -40735687 + L1M4b LINE L1 1531 1785 -5070 450 197 78 14 chr10 104853606 104853748 -40735540 + L1MB8 LINE L1 4965 5115 -1031 230 264 88 16 chr10 104853829 104853954 -40735334 - L1M4c LINE L1 -4245 2401 2268 5666 211 65 69 chr10 104854297 104854926 -40734362 - L1M4c LINE L1 -4565 2081 1451 1244 205 105 12 chr10 104854926 104855184 -40734104 - AluJo SINE Alu -30 282 1 5666 211 65 69 chr10 104855184 104856599 -40732689 - L1M4c LINE L1 -5195 1451 2 3514 182 87 9 chr10 104856605 104857555 -40731733 + L1MB8 LINE L1 5134 6156 -22 981 258 179 6 chr10 104857581 104858099 -40731189 + L1M4b LINE L1 1806 2423 -4536 879 272 86 24 chr10 104858222 104858782 -40730506 + L1M4b LINE L1 2471 3029 -3928 1632 193 61 6 chr10 104858785 104859111 -40730177 - MER2 DNA MER2_type 0 344 1 254 182 0 0 chr10 104859111 104859155 -40730133 - MER63 DNA MER1_type -344 718 675 232 290 0 0 chr10 104859245 104859314 -40729974 + L1M4b LINE L1 3037 3105 -3852 413 169 0 0 chr10 104859316 104859387 -40729901 - MLT1A2 LTR MaLR 0 374 304 3119 221 59 74 chr10 104859388 104860619 -40728669 + L1M4b LINE L1 3177 4424 -2533 234 0 0 0 chr10 104860619 104860645 -40728643 + (TAGA)n Simple_repeat Simple_repeat 2 27 0 3119 221 59 74 chr10 104860645 104860679 -40728609 + L1M4b LINE L1 4424 4425 -2532 1274 234 58 33 chr10 104860679 104861042 -40728246 + MLT1A2 LTR MaLR 1 372 -2 3119 221 59 74 chr10 104861042 104861076 -40728212 + L1M4b LINE L1 4425 4458 -2499 438 321 29 0 chr10 104861181 104861318 -40727970 - HERV16 LTR ERVL -4855 141 1 459 347 24 37 chr10 104861320 104861614 -40727674 - LTR16B LTR ERVL -2 462 173 271 268 22 116 chr10 104861658 104861737 -40727551 - LTR16A LTR ERVL -325 125 40 699 90 0 0 chr10 104861737 104861837 -40727451 + (TTCC)n Simple_repeat Simple_repeat 3 102 0 1315 172 101 19 chr10 104861840 104862107 -40727181 - AluJo SINE Alu -23 289 1 271 268 22 116 chr10 104862107 104862161 -40727127 - LTR16A LTR ERVL -412 38 1 1907 241 172 23 chr10 104862161 104862373 -40726915 + L1ME LINE L1 1210 1389 -5007 1628 153 10 47 chr10 104862373 104862499 -40726789 + AluJb SINE Alu 13 142 -170 2169 115 7 3 chr10 104862499 104862804 -40726484 + AluSx SINE Alu 5 310 -2 1628 153 10 47 chr10 104862804 104862977 -40726311 + AluJb SINE Alu 142 301 -11 1907 241 172 23 chr10 104862977 104863734 -40725554 + L1ME LINE L1 1389 2324 -4072 4135 258 68 5 chr10 104863737 104865100 -40724188 + L1ME LINE L1 2436 3884 -2331 1376 201 105 37 chr10 104865110 104865549 -40723739 + L1ME LINE L1 5290 5752 -483 207 255 39 0 chr10 104865555 104865606 -40723682 + L2 LINE L2 3219 3271 -1 1990 147 0 3 chr10 104865633 104866054 -40723234 - AluSx SINE Alu 0 425 6 759 187 8 15 chr10 104866069 104866203 -40723085 - FLAM_C SINE Alu 0 133 1 28671 62 13 6 chr10 104866227 104871644 -40717644 - L1PA5 LINE L1 -3 6151 706 3540 154 36 2 chr10 104871645 104872228 -40717060 - L1PA5 LINE L1 -5533 613 11 2259 101 7 0 chr10 104872288 104872575 -40716713 - AluSc SINE Alu -20 289 1 336 265 112 0 chr10 104872575 104872673 -40716615 - MIR SINE MIR -101 161 53 1937 157 0 13 chr10 104873724 104874029 -40715259 - AluSx SINE Alu -11 301 1 1016 204 83 9 chr10 104874658 104874888 -40714400 - MLT1B LTR MaLR -2 465 219 387 56 0 0 chr10 104875567 104875621 -40713667 + (CAT)n Simple_repeat Simple_repeat 3 56 0 1026 179 30 51 chr10 104876195 104876429 -40712859 - MLT1B LTR MaLR -161 229 1 2674 88 11 35 chr10 104876820 104877193 -40712095 + THE1B LTR MaLR 1 364 0 28 0 0 0 chr10 104877578 104877606 -40711682 + AT_rich Low_complexity Low_complexity 1 28 0 5042 142 41 32 chr10 104880266 104880648 -40708640 + L1MB2 LINE L1 5028 5405 -766 2710 23 3 0 chr10 104880648 104880948 -40708340 - AluY SINE Alu -10 301 1 5042 142 41 32 chr10 104880948 104881696 -40707592 + L1MB2 LINE L1 5405 6164 -7 260 325 150 8 chr10 104881785 104881905 -40707383 - L2 LINE L2 0 3272 3136 21 36 0 0 chr10 104882946 104882974 -40706314 + AT_rich Low_complexity Low_complexity 1 28 0 975 163 13 0 chr10 104883198 104883351 -40705937 - FRAM SINE Alu -24 152 1 1301 101 0 16 chr10 104883637 104883825 -40705463 + AluY SINE Alu 127 311 0 40 37 0 0 chr10 104883855 104883909 -40705379 + AT_rich Low_complexity Low_complexity 1 54 0 302 277 100 96 chr10 104884141 104884602 -40704686 + HAL1b LINE L1 116 583 -765 2023 127 0 0 chr10 104884602 104884878 -40704410 - AluSq SINE Alu -37 276 1 302 277 100 96 chr10 104884878 104885145 -40704143 + HAL1b LINE L1 583 847 -501 180 0 0 0 chr10 104885237 104885257 -40704031 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1936 84 0 30 chr10 104885617 104885879 -40703409 + AluSx SINE Alu 1 254 -58 207 0 0 0 chr10 104885905 104885928 -40703360 + (TAAAA)n Simple_repeat Simple_repeat 3 25 0 1956 152 49 25 chr10 104887060 104887542 -40701746 + Charlie1 DNA MER1_type 1 2761 0 297 0 0 0 chr10 104887618 104887651 -40701637 + (TTCA)n Simple_repeat Simple_repeat 2 34 0 1405 232 197 25 chr10 104887673 104888417 -40700871 - L2 LINE L2 -56 3257 2384 840 248 22 50 chr10 104888794 104889072 -40700216 + L2 LINE L2 3042 3311 -2 23 92 0 0 chr10 104889166 104889231 -40700057 + AT_rich Low_complexity Low_complexity 1 65 0 375 266 127 6 chr10 104889745 104889903 -40699385 - MIR SINE MIR -73 189 13 860 150 0 14 chr10 104892316 104892456 -40696832 + FRAM SINE Alu 35 172 -4 23 0 0 0 chr10 104892997 104893020 -40696268 + AT_rich Low_complexity Low_complexity 1 23 0 197 287 46 37 chr10 104894015 104894123 -40695165 + MIR SINE MIR 38 146 -62 354 161 16 0 chr10 104894691 104894753 -40694535 - MIR SINE MIR -65 143 81 2054 112 18 0 chr10 104895251 104895572 -40693716 - AluSx SINE Alu 0 326 1 1867 150 27 10 chr10 104896743 104897043 -40692245 - AluJo SINE Alu -7 305 1 268 214 83 12 chr10 104897210 104897294 -40691994 - L2 LINE L2 -44 3228 3139 350 273 159 0 chr10 104898302 104898434 -40690854 - MIR SINE MIR -81 181 29 249 239 45 23 chr10 104899310 104899398 -40689890 - L2 LINE L2 -188 3084 2995 204 97 0 0 chr10 104900003 104900034 -40689254 + (TG)n Simple_repeat Simple_repeat 1 31 0 453 257 88 26 chr10 104900664 104900890 -40688398 - MIR SINE MIR -21 241 2 195 42 0 0 chr10 104901291 104901315 -40687973 + (TA)n Simple_repeat Simple_repeat 1 24 0 4887 169 34 10 chr10 104902685 104903997 -40685291 - L1MB8 LINE L1 0 6178 4839 715 257 8 79 chr10 104904123 104904292 -40684996 - MIR SINE MIR -34 228 79 1679 166 53 11 chr10 104904292 104904576 -40684712 + AluJb SINE Alu 5 300 -12 715 257 8 79 chr10 104904576 104904647 -40684641 - MIR SINE MIR -183 79 5 3133 164 16 58 chr10 104905586 104906225 -40683063 + LTR9 LTR ERV1 1 612 0 681 188 38 0 chr10 104906974 104907107 -40682181 + MIR SINE MIR 81 218 -44 302 216 27 14 chr10 104907850 104907924 -40681364 - Charlie8 DNA MER1_type -2226 191 117 265 289 12 0 chr10 104907955 104908038 -40681250 - MIR SINE MIR -8 254 171 3607 131 49 9 chr10 104908718 104909370 -40679918 + MER50 LTR ERV1 1 711 -23 305 328 17 0 chr10 104910210 104910329 -40678959 + MER5B DNA MER1_type 44 164 -14 383 224 35 115 chr10 104910454 104910566 -40678722 + MIR SINE MIR 27 122 -140 2249 119 0 13 chr10 104910566 104910877 -40678411 - AluSx SINE Alu -5 307 1 383 224 35 115 chr10 104910877 104910938 -40678350 + MIR SINE MIR 122 186 -76 2345 93 0 7 chr10 104911522 104911824 -40677464 - AluSq SINE Alu -13 300 1 204 252 113 26 chr10 104911936 104912051 -40677237 + MIR3 SINE MIR 4 128 -80 262 362 9 0 chr10 104912090 104912195 -40677093 + L2 LINE L2 3148 3253 -19 1990 118 18 0 chr10 104912438 104912742 -40676546 + AluSx SINE Alu 1 309 0 275 0 29 0 chr10 104913015 104913050 -40676238 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 274 331 50 0 chr10 104913540 104913661 -40675627 - MIR SINE MIR -133 129 3 1273 134 0 0 chr10 104913967 104914146 -40675142 - AluSg/x SINE Alu 0 310 132 2175 121 3 0 chr10 104914146 104914436 -40674852 - AluSx SINE Alu -21 291 1 2354 107 25 41 chr10 104914827 104915220 -40674068 - L1MA3 LINE L1 -10 6295 5909 324 48 0 0 chr10 104915534 104915576 -40673712 + (TG)n Simple_repeat Simple_repeat 1 42 0 318 214 193 28 chr10 104915789 104915934 -40673354 + MIR3 SINE MIR 24 192 -16 471 281 73 22 chr10 104917031 104917209 -40672079 + MIR3 SINE MIR 5 191 -17 467 205 70 31 chr10 104917242 104917310 -40671978 - MIR SINE MIR -25 237 173 1958 154 0 44 chr10 104917310 104917629 -40671659 + AluJo SINE Alu 1 305 -7 467 205 70 31 chr10 104917629 104917738 -40671550 - MIR SINE MIR -89 173 42 1940 155 30 7 chr10 104918681 104918985 -40670303 - AluJb SINE Alu -1 311 1 271 396 14 0 chr10 104919183 104919327 -40669961 + L2 LINE L2 2613 2758 -556 551 294 61 13 chr10 104919804 104920041 -40669247 - MIR SINE MIR -12 250 3 703 269 32 9 chr10 104920354 104920570 -40668718 + MIR SINE MIR 32 252 -10 433 242 17 20 chr10 104921024 104921202 -40668086 + MIR SINE MIR 31 260 -2 349 285 87 23 chr10 104921223 104921395 -40667893 - MIR SINE MIR -77 185 3 1933 151 0 16 chr10 104922418 104922723 -40666565 + AluJb SINE Alu 1 300 -12 382 331 55 0 chr10 104922817 104922944 -40666344 + MIR3 SINE MIR 57 190 -18 494 294 86 7 chr10 104923658 104923882 -40665406 + MIR SINE MIR 16 258 -4 475 235 176 7 chr10 104924780 104924933 -40664355 - MER5A DNA MER1_type 0 189 11 339 244 134 8 chr10 104925181 104925300 -40663988 - MIR3 SINE MIR -15 193 60 248 373 75 0 chr10 104925427 104925639 -40663649 - L2 LINE L2 -666 2648 2421 409 294 90 32 chr10 104925894 104926173 -40663115 + L2 LINE L2 3015 3309 -4 234 259 0 0 chr10 104926179 104926237 -40663051 + L3 LINE CR1 1175 1232 -345 834 149 0 22 chr10 104926304 104926438 -40662850 - FLAM_C SINE Alu -1 132 2 275 298 43 71 chr10 104926564 104926705 -40662583 + L3 LINE CR1 1440 1576 -1 1979 145 37 0 chr10 104927600 104927897 -40661391 - AluJb SINE Alu -2 310 3 2172 130 36 30 chr10 104927921 104928283 -40661005 + THE1B LTR MaLR 1 364 0 280 288 59 59 chr10 104928287 104928405 -40660883 + L2 LINE L2 3137 3254 -18 1874 167 0 7 chr10 104929142 104929441 -40659847 + AluJb SINE Alu 1 297 -15 21 0 0 0 chr10 104929706 104929727 -40659561 + AT_rich Low_complexity Low_complexity 1 21 0 246 370 9 0 chr10 104931189 104931297 -40657991 + L1MC/D LINE L1 5552 5660 -2148 235 241 0 0 chr10 104931366 104931420 -40657868 - L1ME LINE L1 -526 5595 5542 314 105 0 35 chr10 104931681 104931738 -40657550 + (CATA)n Simple_repeat Simple_repeat 4 58 0 2351 102 3 6 chr10 104932150 104932464 -40656824 + AluSp SINE Alu 1 313 0 21 36 0 0 chr10 104932822 104932850 -40656438 + AT_rich Low_complexity Low_complexity 1 28 0 1899 126 71 32 chr10 104933424 104933958 -40655330 + MER51A LTR ERV1 1 634 0 767 252 89 70 chr10 104933995 104934066 -40655222 + L1MC4a LINE L1 5191 5259 -887 523 154 0 0 chr10 104934066 104934144 -40655144 - MADE1 DNA Mariner 0 80 3 767 252 89 70 chr10 104934144 104934696 -40654592 + L1MC4a LINE L1 5259 5403 -743 510 108 0 0 chr10 104936261 104936344 -40652944 + (GA)n Simple_repeat Simple_repeat 1 83 0 1321 93 5 37 chr10 104936766 104936981 -40652307 - L1MA4 LINE L1 -6 6294 6087 492 200 20 87 chr10 104937833 104937921 -40651367 - MER5A DNA MER1_type -39 150 75 2297 103 7 3 chr10 104937921 104938231 -40651057 - AluSq SINE Alu -2 311 1 492 200 20 87 chr10 104938231 104938292 -40650996 - MER5A DNA MER1_type -114 75 11 24 0 0 0 chr10 104938525 104938549 -40650739 + AT_rich Low_complexity Low_complexity 1 24 0 409 285 22 36 chr10 104939460 104939597 -40649691 + MER5A DNA MER1_type 54 188 -1 2561 60 0 25 chr10 104939614 104939933 -40649355 + AluY SINE Alu 1 311 0 2384 80 0 0 chr10 104940381 104940691 -40648597 - AluSq SINE Alu 0 310 1 576 183 248 0 chr10 104940789 104940926 -40648362 + MER5B DNA MER1_type 8 178 0 601 110 0 0 chr10 104941931 104942013 -40647275 + AluS SINE Alu 2 83 -230 34 65 0 0 chr10 104942238 104942300 -40646988 + AT_rich Low_complexity Low_complexity 1 62 0 2301 110 0 0 chr10 104942479 104942780 -40646508 + AluSx SINE Alu 1 301 -11 224 268 89 16 chr10 104942913 104943036 -40646252 - L2 LINE L2 -309 3004 2872 700 177 66 33 chr10 104943386 104943567 -40645721 - MER96B DNA MER1_type? -183 234 48 211 238 0 0 chr10 104944183 104944225 -40645063 - MIR SINE MIR -59 149 108 917 199 73 53 chr10 104944625 104944731 -40644557 - MIR SINE MIR -2 260 158 533 105 11 11 chr10 104944731 104944826 -40644462 - L1MB2 LINE L1 -4 6167 6073 917 199 73 53 chr10 104944826 104944965 -40644323 - MIR SINE MIR -104 158 10 252 100 0 0 chr10 104945551 104945591 -40643697 + (T)n Simple_repeat Simple_repeat 1 40 0 2058 145 0 3 chr10 104946729 104947025 -40642263 - AluJb SINE Alu -17 295 1 898 154 0 51 chr10 104947116 104947291 -40641997 - L1MB5 LINE L1 -1 6173 6008 418 235 19 11 chr10 104948312 104948431 -40640857 - MIR SINE MIR -63 145 37 296 254 0 0 chr10 104948816 104948883 -40640405 + MIR3 SINE MIR 88 154 -54 938 172 35 11 chr10 104948994 104949168 -40640120 - MER45A DNA AcHobo 0 178 1 1375 191 79 4 chr10 104950856 104951000 -40638288 - AluJo SINE Alu -25 287 155 378 0 0 0 chr10 104951000 104951042 -40638246 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 1375 191 79 4 chr10 104951042 104951164 -40638124 - AluJo SINE Alu -157 155 1 964 164 159 0 chr10 104951664 104951853 -40637435 - MER20 DNA MER1_type 0 219 1 342 282 112 53 chr10 104952746 104952916 -40636372 - MIR SINE MIR -14 248 69 549 288 90 0 chr10 104953508 104953730 -40635558 + L3 LINE CR1 627 868 -709 440 210 152 29 chr10 104953782 104953920 -40635368 - MIR SINE MIR -26 236 82 1425 72 29 19 chr10 104956297 104956506 -40632782 + L1PA7 LINE L1 5943 6153 -1 618 164 0 0 chr10 104958688 104958810 -40630478 + GA-rich Low_complexity Low_complexity 2 123 0 2605 65 7 3 chr10 104959641 104959951 -40629337 - AluY SINE Alu 0 311 1 732 242 87 85 chr10 104960274 104960488 -40628800 + L1ME3A LINE L1 5475 5687 -483 2252 129 3 0 chr10 104960488 104960799 -40628489 - AluSx SINE Alu 0 312 1 732 242 87 85 chr10 104960799 104961052 -40628236 + L1ME3A LINE L1 5687 5951 -219 255 61 0 0 chr10 104961315 104961348 -40627940 + (A)n Simple_repeat Simple_repeat 1 33 0 450 298 21 7 chr10 104961578 104961719 -40627569 - MIR SINE MIR -105 157 15 180 288 34 0 chr10 104961797 104961856 -40627432 + MIR SINE MIR 87 147 -61 322 302 8 32 chr10 104962227 104962353 -40626935 - MIR SINE MIR -80 182 60 2523 119 6 0 chr10 104963555 104963908 -40625380 + THE1A LTR MaLR 1 355 0 714 277 105 42 chr10 104964143 104965120 -40624168 + L1MC4a LINE L1 4541 5584 -816 2511 166 62 2 chr10 104965126 104965560 -40623728 + MER66B LTR ERV1 27 486 0 799 218 81 5 chr10 104965560 104965757 -40623531 + L1MC4a LINE L1 5580 5791 -2017 396 249 106 42 chr10 104965762 104965903 -40623385 + L1MC4a LINE L1 5948 6109 -1699 1685 147 49 3 chr10 104965903 104966189 -40623099 - AluJb SINE Alu -13 299 1 396 249 106 42 chr10 104966189 104966264 -40623024 + L1MC4a LINE L1 6109 6178 -1630 398 197 134 47 chr10 104966614 104966805 -40622483 + L1MC4 LINE L1 6618 6902 -991 970 141 12 37 chr10 104966874 104967037 -40622251 - AluJb SINE Alu -21 291 133 379 221 34 27 chr10 104967054 104967203 -40622085 + L1MC4 LINE L1 6935 7084 -958 636 234 16 21 chr10 104967315 104967507 -40621781 + L1MC4 LINE L1 7093 7283 -759 400 281 0 25 chr10 104967691 104967812 -40621476 + MER94 DNA DNA 2 119 -15 228 235 20 82 chr10 104967829 104967927 -40621361 + L1MC5 LINE L1 7349 7440 -521 483 228 206 41 chr10 104967968 104968232 -40621056 + L1MC4 LINE L1 7636 8033 -9 319 328 17 0 chr10 104968853 104968972 -40620316 - MER117 DNA MER1_type -70 127 7 463 172 108 0 chr10 104969327 104969420 -40619868 + MER53 DNA DNA 3 105 -84 188 132 26 0 chr10 104969450 104969488 -40619800 - MIR SINE MIR -74 134 96 637 319 29 18 chr10 104970033 104970365 -40618923 + L1ME4a LINE L1 5284 5618 -503 26 0 0 0 chr10 104970370 104970396 -40618892 + AT_rich Low_complexity Low_complexity 1 26 0 497 283 93 33 chr10 104970403 104970569 -40618719 + L1ME4a LINE L1 5704 5859 -262 180 0 0 0 chr10 104970569 104970589 -40618699 + (A)n Simple_repeat Simple_repeat 1 20 0 497 283 93 33 chr10 104970589 104970703 -40618585 + L1ME4a LINE L1 5859 6021 -100 1420 223 68 53 chr10 104970830 104971283 -40618005 - MLT1C LTR MaLR 0 467 8 2473 163 80 7 chr10 104971283 104971736 -40617552 + MER66B LTR ERV1 1 486 0 347 200 80 0 chr10 104971800 104971875 -40617413 - MLT1K LTR MaLR 0 588 508 1422 174 150 21 chr10 104972006 104972386 -40616902 - MER63B DNA MER1_type 0 436 8 201 74 0 0 chr10 104973796 104973823 -40615465 + (TG)n Simple_repeat Simple_repeat 2 28 0 2109 86 47 4 chr10 104974689 104974968 -40614320 + AluSq SINE Alu 1 291 -22 25 31 0 0 chr10 104974968 104975000 -40614288 + AT_rich Low_complexity Low_complexity 1 32 0 468 211 254 0 chr10 104975042 104975184 -40614104 - MER45A DNA AcHobo 0 178 1 315 321 107 6 chr10 104976714 104976882 -40612406 - MIR SINE MIR -74 188 4 394 251 35 12 chr10 104977067 104977238 -40612050 + L1P LINE L1 4875 5049 -1097 183 162 0 0 chr10 104977244 104977281 -40612007 + (CACCC)n Simple_repeat Simple_repeat 4 40 0 694 258 61 48 chr10 104977321 104977835 -40611453 + L1MC/D LINE L1 5093 5610 -743 2644 131 24 28 chr10 104978037 104978496 -40610792 - L1PB4 LINE L1 -7 6149 5693 1754 147 89 16 chr10 104978513 104978827 -40610461 - L1MC1 LINE L1 0 6333 5997 446 317 21 0 chr10 104978827 104978972 -40610316 - MIR SINE MIR -68 194 47 415 267 40 45 chr10 104980296 104980472 -40608816 - MER5B DNA MER1_type 0 178 4 1141 195 112 40 chr10 104980565 104980914 -40608374 + MLT1A2 LTR MaLR 1 374 0 849 262 44 33 chr10 104981888 104982159 -40607129 - LTR16A LTR ERVL -10 440 167 2189 128 0 0 chr10 104982324 104982622 -40606666 - AluSx SINE Alu -12 300 3 1681 189 0 17 chr10 104982982 104983273 -40606015 - AluJo SINE Alu -13 299 14 563 117 11 0 chr10 104983300 104983394 -40605894 - L1PB1 LINE L1 0 6151 6057 760 231 98 51 chr10 104983480 104983775 -40605513 + L2 LINE L2 3005 3313 0 443 224 0 0 chr10 104984384 104984469 -40604819 - MER63 DNA MER1_type 0 1060 976 227 292 33 25 chr10 104986039 104986159 -40603129 - MIR SINE MIR -75 187 67 753 194 0 19 chr10 104986459 104986614 -40602674 - AluJb SINE Alu -1 311 160 293 291 12 0 chr10 104986784 104986870 -40602418 - MIR SINE MIR -74 188 102 257 148 148 0 chr10 104986953 104987007 -40602281 + MLT1I LTR MaLR 309 370 -39 1490 244 130 29 chr10 104987244 104987869 -40601419 - LTR50 LTR ERVL -68 674 8 315 268 114 32 chr10 104988124 104988247 -40601041 - MIR SINE MIR -116 146 14 482 340 14 19 chr10 104988553 104988762 -40600526 - L3 LINE CR1 -75 1502 1295 2385 97 0 0 chr10 104988871 104989169 -40600119 + AluSq SINE Alu 1 298 -15 271 235 9 157 chr10 104989231 104989346 -40599942 + MIR SINE MIR 12 109 -153 2311 107 0 3 chr10 104991973 104992272 -40597016 - AluSc SINE Alu -11 298 1 290 179 86 107 chr10 104993116 104993225 -40596063 + L1ME4a LINE L1 5962 6069 -52 2426 75 7 3 chr10 104993225 104993533 -40595755 - AluSc SINE Alu 0 309 1 290 179 86 107 chr10 104993533 104993563 -40595725 + L1ME4a LINE L1 6069 6098 -23 423 211 0 0 chr10 104993563 104993658 -40595630 + (TA)n Simple_repeat Simple_repeat 2 96 0 1536 145 114 0 chr10 104993658 104993920 -40595368 - AluJb SINE Alu -18 294 3 1285 186 107 60 chr10 104994470 104994900 -40594388 - LTR7 LTR ERV1 0 450 1 270 349 130 8 chr10 104994900 104995138 -40594150 - L3 LINE CR1 -884 693 427 243 191 0 0 chr10 104995572 104995614 -40593674 + MER31B LTR ERV1 1 42 -424 * 1254 202 118 103 chr10 104995588 104996182 -40593106 + MER67B LTR ERV1 59 661 0 27 0 0 0 chr10 104996764 104996791 -40592497 + AT_rich Low_complexity Low_complexity 1 27 0 2230 122 0 16 chr10 104997513 104997824 -40591464 - AluSx SINE Alu -6 306 1 422 243 57 10 chr10 104998168 104998417 -40590871 + MLT1H1 LTR MaLR 41 341 -214 695 239 7 0 chr10 104998452 104998590 -40590698 + MLT1H1 LTR MaLR 417 555 0 390 333 6 24 chr10 104998590 104998755 -40590533 + MER5A DNA MER1_type 27 188 -1 184 242 81 16 chr10 104999372 104999434 -40589854 + MIR SINE MIR 1 66 -196 374 292 58 53 chr10 105000167 105000283 -40589005 + MIR SINE MIR 10 129 -133 2528 81 0 0 chr10 105000283 105000592 -40588696 - AluY SINE Alu -2 309 1 374 292 58 53 chr10 105000592 105000701 -40588587 + MIR SINE MIR 129 236 -26 205 152 0 0 chr10 105001054 105001087 -40588201 - MER5C DNA MER1_type -6 318 286 365 237 32 70 chr10 105001101 105001257 -40588031 - MER5C DNA MER1_type -146 178 29 221 91 36 36 chr10 105001602 105001657 -40587631 + (TAA)n Simple_repeat Simple_repeat 1 55 0 25 31 0 0 chr10 105001744 105001776 -40587512 + AT_rich Low_complexity Low_complexity 1 32 0 542 260 101 6 chr10 105003104 105003273 -40586015 + MIR SINE MIR 68 252 -10 25 31 0 0 chr10 105003333 105003365 -40585923 + AT_rich Low_complexity Low_complexity 1 32 0 2174 140 31 11 chr10 105003391 105003747 -40585541 + MLT1A1 LTR MaLR 3 365 0 380 247 0 0 chr10 105003784 105003865 -40585423 - MER112 DNA MER1_type -179 81 1 668 325 32 12 chr10 105004441 105004687 -40584601 + MIR SINE MIR 9 259 -3 257 0 30 0 chr10 105004793 105004826 -40584462 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 342 299 119 0 chr10 105005667 105005801 -40583487 + MIR3 SINE MIR 42 191 -17 350 21 21 0 chr10 105006803 105006850 -40582438 + (TC)n Simple_repeat Simple_repeat 2 49 0 180 176 0 0 chr10 105006859 105006893 -40582395 + (CATATA)n Simple_repeat Simple_repeat 3 36 0 3714 144 35 92 chr10 105006936 105007714 -40581574 - MER50 LTR ERV1 -1 733 1 935 181 153 96 chr10 105008677 105008905 -40580383 - MLT1A2 LTR MaLR 0 374 118 1822 144 41 7 chr10 105008905 105009197 -40580091 + AluSx SINE Alu 1 302 -10 935 181 153 96 chr10 105009197 105009321 -40579967 - MLT1A2 LTR MaLR -256 118 2 247 305 33 24 chr10 105009645 105009779 -40579509 + MIR SINE MIR 10 150 -58 529 292 81 11 chr10 105010392 105010577 -40578711 + MIR SINE MIR 45 242 -20 23 0 0 0 chr10 105012197 105012220 -40577068 + AT_rich Low_complexity Low_complexity 1 23 0 363 290 120 22 chr10 105012446 105012629 -40576659 + L3 LINE CR1 1288 1488 -89 475 343 117 51 chr10 105013571 105014006 -40575282 + L2 LINE L2 2809 3272 0 211 195 0 0 chr10 105014307 105014348 -40574940 + (TG)n Simple_repeat Simple_repeat 2 42 0 560 216 115 0 chr10 105016605 105016753 -40572535 + MER5A DNA MER1_type 1 165 -24 2528 138 21 14 chr10 105017180 105017609 -40571679 - MSTB1 LTR MaLR 0 432 1 1323 195 0 12 chr10 105017646 105017887 -40571401 - AluJb SINE Alu -3 309 72 666 229 21 36 chr10 105018662 105018854 -40570434 + MER5A DNA MER1_type 1 189 0 5530 164 18 23 chr10 105018884 105020005 -40569283 + L1MA7 LINE L1 5177 6291 0 332 334 28 13 chr10 105020025 105020260 -40569028 + MIR SINE MIR 20 256 -6 350 319 94 12 chr10 105021221 105021381 -40567907 - MIR3 SINE MIR -15 193 21 203 263 12 88 chr10 105021418 105021498 -40567790 - MIR SINE MIR -6 256 183 * 551 250 50 8 chr10 105021483 105021603 -40567685 - L2 LINE L2 0 3313 3189 2067 99 31 0 chr10 105022545 105022839 -40566449 + AluSx SINE Alu 1 303 -9 973 261 194 5 chr10 105022881 105023335 -40565953 - MLT1K LTR MaLR 0 588 22 187 275 117 58 chr10 105023402 105023522 -40565766 - L2 LINE L2 0 3272 3146 412 326 34 29 chr10 105023593 105023768 -40565520 - MER5B DNA MER1_type 0 178 3 1515 181 13 38 chr10 105025074 105025406 -40563882 - L1P4 LINE L1 -394 5767 5445 392 218 16 105 chr10 105025684 105025808 -40563480 - L2 LINE L2 -10 3303 3191 401 293 18 12 chr10 105025845 105026012 -40563276 - MER113 DNA MER1_type? -348 173 6 252 0 0 0 chr10 105026246 105026274 -40563014 + (T)n Simple_repeat Simple_repeat 1 28 0 3073 214 48 64 chr10 105026471 105027410 -40561878 - L1MEc LINE L1 -5181 1215 292 182 343 57 0 chr10 105028399 105028469 -40560819 + L2 LINE L2 3195 3268 -4 352 304 52 42 chr10 105028765 105028956 -40560332 - MIR3 SINE MIR -7 201 9 250 305 26 78 chr10 105029308 105029462 -40559826 - MIR SINE MIR -57 205 60 400 301 226 0 chr10 105031079 105031278 -40558010 - MIR SINE MIR -6 256 13 854 242 5 0 chr10 105032050 105032244 -40557044 + L1MEc LINE L1 52 246 -6150 * 1111 208 14 10 chr10 105032239 105032527 -40556761 - L1MEc LINE L1 -3954 2442 2154 * 1598 262 35 67 chr10 105032524 105032963 -40556325 - L1M4 LINE L1 -1488 4658 4206 2148 116 3 10 chr10 105032963 105033274 -40556014 - AluSq SINE Alu -4 309 1 1598 262 35 67 chr10 105033274 105033359 -40555929 - L1M4 LINE L1 -1940 4206 4120 2156 95 3 3 chr10 105033359 105033653 -40555635 - AluSq SINE Alu -19 294 1 1598 262 35 67 chr10 105033653 105034002 -40555286 - L1M4 LINE L1 -2026 4120 3812 392 79 386 20 chr10 105034436 105034537 -40554751 + L1MC5 LINE L1 7772 7909 -52 305 217 157 0 chr10 105034590 105034673 -40554615 - MER5B DNA MER1_type -76 102 7 419 290 0 75 chr10 105034770 105034963 -40554325 - MIR SINE MIR -60 202 25 357 212 199 20 chr10 105035944 105036095 -40553193 + L1ME LINE L1 5314 5491 -2317 2187 109 0 0 chr10 105036100 105036394 -40552894 - AluSg SINE Alu -16 294 1 23 33 0 0 chr10 105036403 105036433 -40552855 + AT_rich Low_complexity Low_complexity 1 30 0 1011 41 0 0 chr10 105036435 105036558 -40552730 + L1PA5 LINE L1 6032 6154 0 1120 250 90 0 chr10 105036797 105037097 -40552191 - L1ME3A LINE L1 -9 6161 5835 215 269 19 58 chr10 105037137 105037241 -40552047 - MIR SINE MIR -32 230 131 292 262 201 13 chr10 105037928 105038077 -40551211 + MIR SINE MIR 16 192 -70 295 306 73 44 chr10 105038191 105038340 -40550948 - MIR SINE MIR -34 174 13 891 219 75 18 chr10 105038828 105039056 -40550232 - MIR SINE MIR -17 245 5 267 258 165 0 chr10 105039315 105039412 -40549876 + MER81 DNA DNA 2 114 0 283 250 33 0 chr10 105040195 105040287 -40549001 + L1ME LINE L1 5589 5683 -438 2397 89 0 3 chr10 105040694 105041007 -40548281 + AluSx SINE Alu 1 312 0 301 232 53 21 chr10 105042255 105042350 -40546938 - MIR3 SINE MIR 0 208 111 191 313 121 10 chr10 105042703 105042802 -40546486 - MIR SINE MIR -58 150 41 362 290 18 17 chr10 105043321 105043446 -40545842 + MIR SINE MIR 12 132 -76 393 275 107 7 chr10 105043894 105044043 -40545245 - MIR SINE MIR -78 184 21 243 0 0 0 chr10 105044067 105044094 -40545194 + (A)n Simple_repeat Simple_repeat 1 27 0 956 192 18 55 chr10 105044094 105044313 -40544975 - L1MA9 LINE L1 -377 5935 5725 1253 293 167 34 chr10 105045648 105046708 -40542580 - L2 LINE L2 -272 3041 1843 491 237 104 87 chr10 105046708 105046881 -40542407 - MER5B DNA MER1_type -2 176 1 291 301 88 29 chr10 105047017 105047153 -40542135 + MIR SINE MIR 8 151 -111 270 143 48 170 chr10 105047437 105047506 -40541782 - LTR67 LTR ERVL -3 554 478 2258 78 0 0 chr10 105047506 105047790 -40541498 + AluSx SINE Alu 1 284 -28 1008 48 0 0 chr10 105047790 105047916 -40541372 + (CAATA)n Simple_repeat Simple_repeat 2 127 0 270 143 48 170 chr10 105047916 105047992 -40541296 - LTR67 LTR ERVL -77 480 426 1259 176 22 7 chr10 105048506 105048814 -40540474 - MLT1A1 LTR MaLR 0 365 13 1345 228 139 3 chr10 105048940 105049300 -40539988 + MLT1I LTR MaLR 1 409 0 300 338 42 7 chr10 105049384 105049526 -40539762 - L1MEc LINE L1 -4177 2219 2073 293 88 44 15 chr10 105049528 105049596 -40539692 + (TCTA)n Simple_repeat Simple_repeat 3 72 0 520 227 136 28 chr10 105049854 105050030 -40539258 - LTR33 LTR ERVL 0 521 327 1257 71 172 10 chr10 105050895 105051093 -40538195 + MER30 DNA MER1_type 1 230 0 186 103 0 0 chr10 105052316 105052345 -40536943 + (CATA)n Simple_repeat Simple_repeat 3 31 0 385 285 106 0 chr10 105054342 105054465 -40534823 - MIR SINE MIR -13 249 114 241 250 50 0 chr10 105055110 105055170 -40534118 - L2 LINE L2 -27 3286 3224 2059 105 47 0 chr10 105055359 105055655 -40533633 + AluSx SINE Alu 1 310 -2 261 248 14 64 chr10 105055698 105055839 -40533449 + L2 LINE L2 2771 2904 -410 189 299 75 15 chr10 105055847 105055914 -40533374 - MIR SINE MIR -184 78 8 2211 100 7 0 chr10 105056920 105057229 -40532059 + AluSq SINE Alu 1 311 -2 740 275 186 0 chr10 105057598 105057980 -40531308 + LTR33 LTR ERVL 61 513 -8 1294 132 50 43 chr10 105058612 105058870 -40530418 - AluJo SINE Alu -52 260 1 195 184 0 0 chr10 105058885 105058923 -40530365 + GA-rich Low_complexity Low_complexity 3 40 0 2201 99 7 0 chr10 105059019 105059321 -40529967 - AluSx SINE Alu -8 304 1 296 263 55 81 chr10 105059895 105060070 -40529218 - MIR SINE MIR -70 138 13 659 249 110 25 chr10 105060073 105060310 -40528978 - MIR SINE MIR -2 260 4 457 362 80 5 chr10 105060395 105060619 -40528669 - MIR SINE MIR -20 242 2 212 333 98 0 chr10 105061299 105061422 -40527866 + MER91B DNA MER1_type 18 152 -38 725 280 24 14 chr10 105062340 105062551 -40526737 - MIR SINE MIR -32 230 18 524 281 120 9 chr10 105062965 105063182 -40526106 + MIR SINE MIR 17 257 -5 277 302 171 8 chr10 105063385 105063514 -40525774 - MIR3 SINE MIR -46 162 13 909 265 40 0 chr10 105064403 105064626 -40524662 - MIR SINE MIR -18 244 13 236 234 13 91 chr10 105065007 105065084 -40524204 + L2 LINE L2 2989 3059 -213 473 251 35 80 chr10 105065278 105065420 -40523868 - MIR SINE MIR 0 262 130 2302 91 0 0 chr10 105065420 105065727 -40523561 + AluSp SINE Alu 1 307 -6 473 251 35 80 chr10 105065727 105065783 -40523505 - MIR SINE MIR -132 130 73 494 187 49 24 chr10 105065886 105066009 -40523279 + MIR SINE MIR 70 195 -67 2191 41 0 52 chr10 105066313 105066603 -40522685 + AluY SINE Alu 37 311 0 1587 100 166 12 chr10 105066618 105066877 -40522411 + AluSg SINE Alu 1 299 -1 311 197 127 0 chr10 105067880 105067951 -40521337 - MER45A DNA AcHobo 0 178 99 236 139 0 0 chr10 105067947 105067990 -40521298 - AluSc SINE Alu -1 299 257 * 1584 82 9 5 chr10 105067990 105068209 -40521079 - AluSc SINE Alu -89 220 1 505 220 30 0 chr10 105068211 105068311 -40520977 - MER45A DNA AcHobo -73 105 3 1674 175 161 3 chr10 105068393 105068735 -40520553 + MSTD LTR MaLR 1 396 0 1731 207 50 41 chr10 105069145 105069189 -40520099 + MLT1C LTR MaLR 1 43 -424 2172 98 70 53 chr10 105069189 105069484 -40519804 + THE1B LTR MaLR 1 305 -59 2153 86 0 52 chr10 105069484 105069811 -40519477 - AluSg SINE Alu 0 310 1 2172 98 70 53 chr10 105069811 105069873 -40519415 + THE1B LTR MaLR 305 364 0 1731 207 50 41 chr10 105069873 105070291 -40518997 + MLT1C LTR MaLR 43 467 0 21 0 0 0 chr10 105070915 105070936 -40518352 + AT_rich Low_complexity Low_complexity 1 21 0 233 194 0 16 chr10 105070979 105071041 -40518247 + GA-rich Low_complexity Low_complexity 3 63 0 400 318 55 0 chr10 105071062 105071172 -40518116 - MIR3 SINE MIR -52 156 41 2185 92 3 0 chr10 105074002 105074297 -40514991 + AluSg SINE Alu 1 296 -14 451 292 303 14 chr10 105074344 105074707 -40514581 - L3 LINE CR1 -5 1572 1105 331 282 99 47 chr10 105075000 105075213 -40514075 + MIR SINE MIR 20 243 -19 1334 203 50 40 chr10 105076657 105076978 -40512310 + MER33 DNA MER1_type 1 324 0 264 256 163 35 chr10 105077101 105077187 -40512101 - L2 LINE L2 0 3272 3176 209 286 0 32 chr10 105077403 105077466 -40511822 + MIR3 SINE MIR 13 73 -135 344 234 189 0 chr10 105077476 105077587 -40511701 + MIR SINE MIR 120 251 -11 606 176 82 41 chr10 105078193 105078363 -40510925 - MER53 DNA DNA -12 177 1 2265 149 9 142 chr10 105078581 105079164 -40510124 + MLT1D LTR MaLR 1 505 0 228 67 0 0 chr10 105079601 105079631 -40509657 + (T)n Simple_repeat Simple_repeat 1 30 0 209 300 17 75 chr10 105079812 105079932 -40509356 - MIR SINE MIR -80 182 70 454 302 185 5 chr10 105080561 105080766 -40508522 + MIR SINE MIR 20 261 -1 423 264 90 24 chr10 105082122 105082289 -40506999 - MER5B DNA MER1_type 0 178 1 186 43 0 0 chr10 105082458 105082481 -40506807 + (T)n Simple_repeat Simple_repeat 1 23 0 292 310 0 11 chr10 105082659 105082746 -40506542 - MIR3 SINE MIR -53 155 70 835 120 49 77 chr10 105084678 105084746 -40504542 + L1MB8 LINE L1 5987 6055 -123 2191 112 0 0 chr10 105084746 105085051 -40504237 - AluY SINE Alu -6 305 1 835 120 49 77 chr10 105085051 105085165 -40504123 + L1MB8 LINE L1 6055 6164 -14 764 179 136 0 chr10 105086004 105086188 -40503100 - MIR SINE MIR -14 248 40 202 271 0 0 chr10 105086190 105086238 -40503050 + (CACCAT)n Simple_repeat Simple_repeat 2 49 0 219 36 0 0 chr10 105086238 105086266 -40503022 + (A)n Simple_repeat Simple_repeat 1 28 0 276 30 0 0 chr10 105087384 105087417 -40501871 + (CA)n Simple_repeat Simple_repeat 2 34 0 429 125 14 0 chr10 105087725 105087797 -40501491 + MER53 DNA DNA 1 73 -116 335 293 122 7 chr10 105087846 105087993 -40501295 + MIR3 SINE MIR 41 204 -4 275 247 124 11 chr10 105088263 105088352 -40500936 - MER5B DNA MER1_type -79 99 1 2982 195 51 84 chr10 105089147 105090149 -40499139 + LTR5 LTR ERVK 1 969 0 371 219 76 42 chr10 105090256 105090375 -40498913 - L1ME4a LINE L1 -17 6104 5982 1128 259 53 13 chr10 105090598 105090973 -40498315 - L1ME4a LINE L1 -157 5964 5575 364 302 74 20 chr10 105091726 105091875 -40497413 - L2 LINE L2 -1 3271 3115 446 309 124 23 chr10 105093232 105093449 -40495839 + MIR SINE MIR 11 249 -13 246 290 0 0 chr10 105093691 105093784 -40495504 + (CGTG)n Simple_repeat Simple_repeat 3 95 0 373 252 19 19 chr10 105093814 105093921 -40495367 + MER5B DNA MER1_type 3 109 -69 545 343 114 5 chr10 105094667 105094886 -40494402 + MIR SINE MIR 1 243 -19 264 318 0 0 chr10 105095071 105095134 -40494154 - L2 LINE L2 -4 3309 3247 255 282 92 43 chr10 105095349 105095512 -40493776 + MIR SINE MIR 4 174 -88 257 279 33 0 chr10 105095518 105095579 -40493709 + Zaphod DNA AcHobo 4 66 -3965 * 1121 308 100 7 chr10 105095557 105095998 -40493290 + MER115 DNA AcHobo 87 568 -125 599 251 112 10 chr10 105096584 105096793 -40492495 + MIR SINE MIR 24 262 0 2240 82 0 49 chr10 105096840 105097168 -40492120 + AluSx SINE Alu 1 312 0 341 250 80 85 chr10 105099732 105099908 -40489380 + MIR3 SINE MIR 21 195 -13 260 360 195 18 chr10 105100105 105101004 -40488284 + L2 LINE L2 1711 2768 -546 299 327 71 103 chr10 105101108 105101487 -40487801 + L2 LINE L2 2901 3267 -5 591 60 0 0 chr10 105102119 105102203 -40487085 + (TC)n Simple_repeat Simple_repeat 1 84 0 616 253 31 62 chr10 105102768 105103022 -40486266 - MIR SINE MIR -5 257 14 1292 229 59 61 chr10 105103850 105104391 -40484897 + MLT1H LTR MaLR 2 541 -8 530 255 61 36 chr10 105104963 105105159 -40484129 - L2 LINE L2 0 3313 3113 296 194 13 77 chr10 105105161 105105316 -40483972 + (TAAA)n Simple_repeat Simple_repeat 3 147 0 189 256 0 0 chr10 105105586 105105625 -40483663 + MIR SINE MIR 107 145 -117 437 150 88 186 chr10 105105717 105105910 -40483378 - MIR3 SINE MIR -14 194 21 188 219 203 16 chr10 105106925 105106989 -40482299 + MIR3 SINE MIR 114 189 -19 1318 86 5 30 chr10 105107791 105107809 -40481479 + AluSq SINE Alu 120 137 -176 2236 98 0 0 chr10 105107809 105108115 -40481173 + AluSx SINE Alu 1 306 -6 1318 86 5 30 chr10 105108115 105108293 -40480995 + AluSq SINE Alu 137 311 -2 199 193 102 125 chr10 105109262 105109273 -40480015 - L3 LINE CR1 -1 1576 1566 2299 103 0 0 chr10 105109273 105109583 -40479705 + AluSq SINE Alu 1 310 -3 199 193 102 125 chr10 105109583 105109659 -40479629 - L3 LINE CR1 -11 1566 1491 898 256 94 79 chr10 105109941 105110220 -40479068 - L1MC/D LINE L1 -2027 5850 5558 4375 98 5 28 chr10 105110220 105110893 -40478395 + L1MA2 LINE L1 5647 6303 -1 898 256 94 79 chr10 105110893 105111133 -40478155 - L1MC/D LINE L1 -2319 5558 5323 1075 296 76 93 chr10 105111142 105111687 -40477601 - L1MC/D LINE L1 -913 5302 4749 306 0 0 0 chr10 105111687 105111721 -40477567 + (TC)n Simple_repeat Simple_repeat 1 34 0 1075 296 76 93 chr10 105111721 105112414 -40476874 - L1MC/D LINE L1 -1466 4749 4085 238 289 88 21 chr10 105112526 105112765 -40476523 - L1P LINE L1 -2208 3938 3684 1469 284 114 82 chr10 105112780 105114210 -40475078 - L1MEc LINE L1 -2450 3765 2319 2041 119 3 3 chr10 105114210 105114522 -40474766 - AluSp SINE Alu -1 312 1 1469 284 114 82 chr10 105114522 105114644 -40474644 - L1MEc LINE L1 -3896 2319 2202 2152 101 7 0 chr10 105115077 105115373 -40473915 - AluSp SINE Alu -15 298 1 862 164 85 5 chr10 105115436 105115625 -40473663 + L1MA9 LINE L1 6087 6290 -22 2392 148 41 7 chr10 105116357 105116769 -40472519 + MSTB LTR MaLR 1 426 0 1985 142 0 19 chr10 105116864 105117182 -40472106 + AluJb SINE Alu 1 312 0 491 305 100 46 chr10 105117859 105118318 -40470970 - L2 LINE L2 -17 3296 2813 963 235 52 4 chr10 105118417 105118654 -40470634 - MIR SINE MIR -2 260 14 350 267 73 47 chr10 105119990 105120041 -40469247 - L1M4 LINE L1 -2920 3226 3178 2056 115 20 0 chr10 105120041 105120345 -40468943 - AluSx SINE Alu -2 310 1 350 267 73 47 chr10 105120345 105120443 -40468845 - L1M4 LINE L1 -2968 3178 3073 5067 171 42 3 chr10 105120462 105121290 -40467998 - L1MB7 LINE L1 -19 6165 5279 2402 64 0 0 chr10 105121290 105121586 -40467702 - AluY SINE Alu 0 311 16 5067 171 42 3 chr10 105121586 105122040 -40467248 - L1MB7 LINE L1 -905 5279 4844 537 262 83 14 chr10 105122039 105122329 -40466959 - L1M4 LINE L1 -3057 3089 2780 * 503 202 21 0 chr10 105122336 105122430 -40466858 - MER58B DNA MER1_type -1 340 245 439 75 0 0 chr10 105122562 105122629 -40466659 + Alu SINE Alu 244 310 -1 1882 122 12 0 chr10 105122881 105123136 -40466152 - AluSx SINE Alu -36 276 19 966 115 7 27 chr10 105123136 105123284 -40466004 + MER50 LTR ERV1 567 711 -23 906 242 40 70 chr10 105123544 105123842 -40465446 + Charlie8 DNA MER1_type 1 289 -2128 403 306 16 32 chr10 105123967 105124091 -40465197 + L2 LINE L2 3151 3272 0 763 235 6 11 chr10 105125126 105125305 -40463983 - MER5B DNA MER1_type 0 178 1 282 333 32 16 chr10 105125306 105125429 -40463859 + MIR SINE MIR 5 129 -133 374 222 26 16 chr10 105126722 105126809 -40462479 - MIR SINE MIR -95 113 28 939 292 95 32 chr10 105126896 105127399 -40461889 + MLT1H LTR MaLR 2 536 -13 425 274 237 44 chr10 105127714 105128289 -40460999 + L1MC4a LINE L1 5272 5960 -161 2517 45 0 0 chr10 105128661 105128953 -40460335 + AluY SINE Alu 1 292 -19 989 211 16 0 chr10 105129611 105129805 -40459483 + L1MB5 LINE L1 5978 6174 0 309 339 36 20 chr10 105130084 105130279 -40459009 - L1M4 LINE L1 -1537 4609 4412 843 151 0 27 chr10 105130319 105130465 -40458823 - FLAM_C SINE Alu -1 142 1 1149 135 12 0 chr10 105130488 105130658 -40458630 - AluSg/x SINE Alu -9 301 130 2336 91 0 0 chr10 105130674 105130972 -40458316 - AluSq SINE Alu -14 299 2 310 234 140 64 chr10 105131241 105131412 -40457876 - L2 LINE L2 -29 3284 3101 182 300 0 0 chr10 105132135 105132175 -40457113 - L2 LINE L2 -24 3248 3209 341 242 77 11 chr10 105132175 105132266 -40457022 - MIR SINE MIR -81 181 85 486 320 113 5 chr10 105133119 105133313 -40455975 + MIR SINE MIR 34 248 -14 4405 89 9 2 chr10 105133363 105133913 -40455375 - MER41A LTR ERV1 0 554 1 26 30 0 0 chr10 105134003 105134036 -40455252 + AT_rich Low_complexity Low_complexity 1 33 0 1120 99 112 0 chr10 105134036 105134197 -40455091 - AluY SINE Alu -17 294 116 392 235 61 0 chr10 105134490 105134588 -40454700 - MIR SINE MIR -1 261 158 282 56 0 0 chr10 105135229 105135265 -40454023 + (TG)n Simple_repeat Simple_repeat 1 36 0 463 343 113 6 chr10 105135468 105135786 -40453502 - L2 LINE L2 -541 2773 2422 237 232 135 8 chr10 105135985 105136080 -40453208 - MIR SINE MIR -63 145 41 446 275 54 27 chr10 105136688 105136837 -40452451 - L2 LINE L2 0 3313 3161 742 217 72 59 chr10 105136879 105137100 -40452188 - L2 LINE L2 -338 2976 2753 322 267 38 69 chr10 105137339 105137470 -40451818 - MIR3 SINE MIR -71 137 11 347 329 124 53 chr10 105137884 105138279 -40451009 + L2 LINE L2 2830 3252 -20 606 99 0 0 chr10 105138288 105138379 -40450909 + (TGGA)n Simple_repeat Simple_repeat 2 92 0 977 147 5 43 chr10 105138496 105138680 -40450608 - MER5B DNA MER1_type 0 178 2 463 313 57 48 chr10 105139785 105140015 -40449273 - MIR SINE MIR -3 259 28 445 291 228 12 chr10 105140209 105140625 -40448663 - L2 LINE L2 -1 3312 2807 542 270 69 6 chr10 105140704 105140863 -40448425 - MIR SINE MIR -72 190 22 555 278 122 21 chr10 105141223 105141349 -40447939 + L1ME4a LINE L1 5492 5604 -517 2158 136 0 0 chr10 105141349 105141658 -40447630 + AluSx SINE Alu 1 309 -3 555 278 122 21 chr10 105141658 105141866 -40447422 + L1ME4a LINE L1 5604 5860 -261 381 256 194 72 chr10 105142045 105142428 -40446860 - L1M2 LINE L1 -5453 1396 1061 225 119 0 0 chr10 105142428 105142470 -40446818 + (CGG)n Simple_repeat Simple_repeat 1 42 0 381 256 194 72 chr10 105142470 105142565 -40446723 - L1M2 LINE L1 -5788 1061 979 180 0 0 0 chr10 105142565 105142585 -40446703 + (CTG)n Simple_repeat Simple_repeat 3 22 0 381 256 194 72 chr10 105142585 105142717 -40446571 - L1M2 LINE L1 -5870 979 757 1906 139 13 23 chr10 105144523 105144825 -40444463 - AluSx SINE Alu -13 299 1 2169 112 0 0 chr10 105145283 105145599 -40443689 - AluSq SINE Alu 0 316 1 695 234 84 33 chr10 105145600 105145814 -40443474 - MIR SINE MIR -35 227 3 549 250 128 0 chr10 105145965 105146121 -40443167 + MER45A DNA AcHobo 2 177 -1 2262 112 3 3 chr10 105146240 105146553 -40442735 - AluSp SINE Alu 0 313 1 310 256 188 8 chr10 105146927 105147044 -40442244 - MIR3 SINE MIR -7 201 64 230 272 184 9 chr10 105147201 105147315 -40441973 + L2 LINE L2 3180 3313 0 483 228 26 78 chr10 105148425 105148618 -40440670 + MIR SINE MIR 80 262 0 2342 60 0 4 chr10 105148785 105149066 -40440222 + AluY SINE Alu 1 280 -31 180 0 0 0 chr10 105149066 105149086 -40440202 + (CA)n Simple_repeat Simple_repeat 1 20 0 21 36 0 0 chr10 105149453 105149481 -40439807 + AT_rich Low_complexity Low_complexity 1 28 0 2020 136 0 7 chr10 105150263 105150557 -40438731 - AluSx SINE Alu -20 292 1 502 303 46 17 chr10 105150560 105150735 -40438553 + MER117 DNA MER1_type 12 191 -6 211 407 56 19 chr10 105150996 105151104 -40438184 + L2 LINE L2 3136 3247 -25 316 269 146 23 chr10 105151528 105151658 -40437630 + L2 LINE L2 3168 3313 0 954 164 153 5 chr10 105152764 105152953 -40436335 - MER20 DNA MER1_type -1 218 2 21 71 0 0 chr10 105153041 105153083 -40436205 + AT_rich Low_complexity Low_complexity 1 42 0 7301 72 3 0 chr10 105154268 105155645 -40433643 - L1PA7 LINE L1 -1 6153 4772 255 298 182 25 chr10 105156037 105156158 -40433130 - MIR3 SINE MIR -28 180 41 2285 71 41 7 chr10 105156535 105156830 -40432458 + AluY SINE Alu 1 305 -6 556 333 58 4 chr10 105156944 105157169 -40432119 + MIR SINE MIR 21 257 -5 679 279 72 108 chr10 105157794 105158311 -40430977 - HAL1 LINE L1 -1864 643 154 1947 97 43 21 chr10 105158311 105158590 -40430698 + AluSq SINE Alu 1 285 -28 679 279 72 108 chr10 105158590 105158739 -40430549 - HAL1 LINE L1 -2353 154 1 289 328 33 8 chr10 105158756 105158878 -40430410 - L3 LINE CR1 -773 804 680 270 246 100 27 chr10 105158986 105159096 -40430192 - L1ME4a LINE L1 -103 6018 5901 270 263 0 0 chr10 105159106 105159163 -40430125 - L2 LINE L2 -5 3308 3252 596 243 95 67 chr10 105159184 105159312 -40429976 - L1ME4a LINE L1 -215 5906 5783 2097 87 49 17 chr10 105159312 105159599 -40429689 - AluSc SINE Alu -13 296 1 596 243 95 67 chr10 105159599 105159828 -40429460 - L1ME4a LINE L1 -338 5783 5539 1631 161 68 4 chr10 105160166 105160446 -40428842 - AluJb SINE Alu -14 298 1 221 308 115 54 chr10 105160453 105160583 -40428705 - MIR SINE MIR -74 188 51 412 315 129 36 chr10 105160635 105160914 -40428374 - L3 LINE CR1 -1113 464 160 2421 80 3 3 chr10 105161966 105162266 -40427022 + AluSq SINE Alu 1 300 -13 1069 213 12 51 chr10 105165092 105165345 -40423943 - AluJo SINE Alu -63 249 7 2064 123 0 20 chr10 105165673 105165974 -40423314 + AluSx SINE Alu 1 295 -17 1578 160 71 11 chr10 105166000 105166282 -40423006 + AluJo SINE Alu 7 305 -7 30 27 0 0 chr10 105166359 105166396 -40422892 + AT_rich Low_complexity Low_complexity 1 37 0 313 298 21 53 chr10 105166760 105166854 -40422434 + MIR SINE MIR 4 95 -113 1252 138 67 5 chr10 105166903 105167113 -40422175 - MSTA LTR MaLR -1 427 205 180 0 0 0 chr10 105167114 105167134 -40422154 + (A)n Simple_repeat Simple_repeat 1 20 0 231 103 0 0 chr10 105168652 105168691 -40420597 + (CAT)n Simple_repeat Simple_repeat 3 41 0 270 246 66 0 chr10 105169734 105169795 -40419493 - L2 LINE L2 -4 3268 3204 236 179 0 0 chr10 105169975 105170014 -40419274 + tRNA-Arg-AGA tRNA tRNA 1 39 -37 2255 96 0 13 chr10 105170690 105170991 -40418297 - AluSx SINE Alu -15 297 1 3136 255 164 26 chr10 105171293 105172844 -40416444 - L2 LINE L2 0 3313 1541 477 306 131 10 chr10 105172848 105173054 -40416234 + MIR SINE MIR 7 237 -25 321 295 53 0 chr10 105175142 105175237 -40414051 - MIR SINE MIR -14 248 149 263 250 202 24 chr10 105175815 105175939 -40413349 - MIR SINE MIR -6 256 111 653 250 190 5 chr10 105176493 105176709 -40412579 - MER46C DNA MER2_type -1 337 82 1507 177 16 0 chr10 105176926 105177180 -40412108 - AluJo SINE Alu -54 258 1 357 305 35 50 chr10 105179011 105179152 -40410136 + L2 LINE L2 3134 3272 0 24 0 0 0 chr10 105179513 105179537 -40409751 + AT_rich Low_complexity Low_complexity 1 24 0 573 276 47 70 chr10 105179765 105179979 -40409309 - MIR SINE MIR -47 215 7 2132 145 0 0 chr10 105180523 105180834 -40408454 - AluSx SINE Alu -1 311 1 1684 112 50 8 chr10 105181515 105181773 -40407515 - AluSx SINE Alu -13 299 31 288 0 0 0 chr10 105183426 105183458 -40405830 + (ATTG)n Simple_repeat Simple_repeat 2 33 0 2195 106 3 0 chr10 105183458 105183742 -40405546 - AluSq SINE Alu -28 285 1 22 35 0 0 chr10 105184419 105184448 -40404840 + AT_rich Low_complexity Low_complexity 1 29 0 232 350 25 25 chr10 105184852 105184972 -40404316 - MIR3 SINE MIR -81 127 8 2369 74 0 14 chr10 105185712 105186008 -40403280 + AluY SINE Alu 1 292 -19 2076 131 156 8 chr10 105186214 105186573 -40402715 + MSTA LTR MaLR 17 428 0 1417 178 0 0 chr10 105186573 105186803 -40402485 + MLT1A1 LTR MaLR 134 363 -2 302 314 170 16 chr10 105186964 105187158 -40402130 - L2 LINE L2 -5 3267 3044 338 312 46 0 chr10 105187525 105187634 -40401654 - L2 LINE L2 0 3272 3159 394 220 49 11 chr10 105187896 105188030 -40401258 - MIR SINE MIR -62 146 15 419 152 37 11 chr10 105188159 105188259 -40401029 - MLT1A1 LTR MaLR -7 463 259 3074 164 28 21 chr10 105188361 105188893 -40400395 + MER82 DNA MER2_type 118 653 0 1956 130 0 63 chr10 105189844 105190159 -40399129 + AluSx SINE Alu 1 295 -17 180 286 254 0 chr10 105190364 105190427 -40398861 + L2 LINE L2 3154 3232 -40 893 224 114 12 chr10 105191540 105191786 -40397502 - Charlie8 DNA MER1_type -2129 288 18 361 256 12 0 chr10 105192639 105192725 -40396563 - MIR3 SINE MIR -34 174 88 425 175 138 0 chr10 105192965 105193045 -40396243 - AluJo/FRAM SINE Alu -22 290 200 1386 160 4 40 chr10 105193045 105193295 -40395993 - AluJo SINE Alu -71 241 1 548 303 53 29 chr10 105196410 105196618 -40392670 + MIR SINE MIR 2 214 -48 2001 116 3 40 chr10 105196764 105197067 -40392221 - AluSq SINE Alu -21 292 1 461 211 230 19 chr10 105197340 105197501 -40391787 - MIR SINE MIR -33 229 35 240 86 0 0 chr10 105197653 105197688 -40391600 + (TG)n Simple_repeat Simple_repeat 2 36 0 1881 166 37 0 chr10 105198242 105198538 -40390750 + AluJb SINE Alu 1 307 -5 1838 128 83 7 chr10 105198937 105199225 -40390063 + AluSx SINE Alu 3 312 0 207 257 19 50 chr10 105200196 105200266 -40389022 + MIR SINE MIR 90 159 -49 1497 199 113 29 chr10 105200468 105200884 -40388404 - MLT1C LTR MaLR -1 466 16 250 366 86 11 chr10 105201208 105201301 -40387987 + MIR3 SINE MIR 3 102 -106 2161 129 26 17 chr10 105201520 105201868 -40387420 + THE1B LTR MaLR 14 364 0 204 40 0 0 chr10 105201979 105202004 -40387284 + (TA)n Simple_repeat Simple_repeat 2 26 0 189 0 0 0 chr10 105202011 105202032 -40387256 + (TTG)n Simple_repeat Simple_repeat 1 21 0 2017 103 3 45 chr10 105202032 105202324 -40386964 - AluSx SINE Alu -29 283 1 288 315 40 72 chr10 105202347 105202569 -40386719 + L1MC4a LINE L1 5667 5881 -1927 435 68 0 0 chr10 105202620 105202679 -40386609 + (CA)n Simple_repeat Simple_repeat 2 60 0 198 0 0 0 chr10 105202795 105202817 -40386471 + (T)n Simple_repeat Simple_repeat 1 22 0 1099 86 7 0 chr10 105203115 105203255 -40386033 - AluJb SINE Alu -15 297 157 660 241 0 0 chr10 105203355 105203492 -40385796 - MIR SINE MIR -13 249 113 1667 276 89 3 chr10 105204148 105204720 -40384568 + L1ME3A LINE L1 5545 6165 -5 180 285 87 81 chr10 105205492 105205850 -40383438 + L2 LINE L2 2818 3177 -95 643 221 21 145 chr10 105206696 105206910 -40382378 + MLT1I LTR MaLR 157 327 -82 1503 150 75 26 chr10 105206910 105207176 -40382112 - AluJo SINE Alu -17 295 17 643 221 21 145 chr10 105207176 105207250 -40382038 + MLT1I LTR MaLR 327 409 0 2438 58 0 3 chr10 105207738 105208031 -40381257 + AluY SINE Alu 1 292 -19 21 0 0 0 chr10 105208126 105208147 -40381141 + AT_rich Low_complexity Low_complexity 1 21 0 212 342 0 0 chr10 105208321 105208385 -40380903 - MIR SINE MIR -103 105 49 24 32 0 0 chr10 105208503 105208534 -40380754 + AT_rich Low_complexity Low_complexity 1 31 0 27 49 0 0 chr10 105208918 105208959 -40380329 + AT_rich Low_complexity Low_complexity 1 41 0 403 256 23 12 chr10 105209310 105209396 -40379892 + MER5B DNA MER1_type 1 87 -91 2199 102 10 26 chr10 105209692 105209997 -40379291 + AluSx SINE Alu 1 300 -12 2352 77 47 0 chr10 105210309 105210607 -40378681 + AluSq SINE Alu 1 312 -1 299 306 43 89 chr10 105211109 105211344 -40377944 + L3 LINE CR1 596 819 -758 253 259 91 70 chr10 105211341 105211484 -40377804 - MIR SINE MIR 0 262 117 * 639 276 35 94 chr10 105211654 105211994 -40377294 - L1ME1 LINE L1 -7 6159 5840 476 134 0 0 chr10 105212005 105212072 -40377216 - AluSx SINE Alu -20 290 224 800 120 0 0 chr10 105212076 105212184 -40377104 - AluSq/x SINE Alu -204 108 1 3662 200 71 26 chr10 105212184 105213604 -40375684 - L1ME1 LINE L1 -322 5844 4361 1710 92 5 0 chr10 105213604 105213822 -40375466 - AluSx SINE Alu -93 219 1 3662 200 71 26 chr10 105213822 105213833 -40375455 - L1ME1 LINE L1 -1805 4361 4352 2131 144 42 9 chr10 105213860 105214194 -40375094 - MER7A DNA MER2_type 0 346 4 1861 137 97 71 chr10 105214199 105214414 -40374874 - Tigger2a DNA MER2_type -2274 434 226 1141 166 12 0 chr10 105214414 105214583 -40374705 + FAM SINE Alu 1 171 -4 1861 137 97 71 chr10 105214583 105214789 -40374499 - Tigger2a DNA MER2_type -2482 226 2 351 219 27 0 chr10 105214790 105214863 -40374425 - L1ME1 LINE L1 -1807 4339 4265 1628 243 67 25 chr10 105214931 105215496 -40373792 - L1ME1 LINE L1 -1862 4284 3696 418 311 40 14 chr10 105217635 105217783 -40371505 + MIR SINE MIR 3 154 -108 819 229 0 23 chr10 105218605 105218780 -40370508 + MER58A DNA MER1_type 22 192 -32 2369 106 0 0 chr10 105219133 105219444 -40369844 - AluY SINE Alu 0 311 1 431 300 44 50 chr10 105219679 105219839 -40369449 + MIR3 SINE MIR 43 201 -7 272 348 104 0 chr10 105219855 105219970 -40369318 - L2 LINE L2 -1 3271 3145 181 282 77 13 chr10 105220073 105220151 -40369137 - L2 LINE L2 -190 3082 3000 189 36 0 0 chr10 105220199 105220227 -40369061 + L2 LINE L2 3245 3272 0 376 241 179 0 chr10 105221449 105221561 -40367727 - MER20B DNA MER1_type -616 167 36 21 0 0 0 chr10 105221711 105221732 -40367556 + AT_rich Low_complexity Low_complexity 1 21 0 318 295 106 68 chr10 105222384 105222591 -40366697 + L2 LINE L2 2653 2867 -447 23 33 0 0 chr10 105222799 105222829 -40366459 + AT_rich Low_complexity Low_complexity 1 30 0 320 201 8 16 chr10 105224450 105224519 -40364769 - FLAM_A SINE Alu -82 50 1 306 325 126 15 chr10 105224868 105225074 -40364214 + MIR SINE MIR 1 229 -33 543 238 144 15 chr10 105225119 105225321 -40363967 + MIR SINE MIR 20 247 -15 659 220 85 45 chr10 105227164 105227996 -40361292 - L1MC5 LINE L1 -30 7931 7018 240 96 500 0 chr10 105228192 105228244 -40361044 + MADE1 DNA Mariner 2 79 -1 399 234 47 39 chr10 105228271 105228399 -40360889 - L2 LINE L2 0 3313 3185 207 100 0 0 chr10 105231547 105231577 -40357711 + (TG)n Simple_repeat Simple_repeat 2 31 0 888 196 98 5 chr10 105233357 105233541 -40355747 - MER58A DNA MER1_type 0 224 24 239 266 0 0 chr10 105237395 105237459 -40351829 + (CCG)n Simple_repeat Simple_repeat 1 64 0 204 186 68 0 chr10 105240353 105240412 -40348876 + MIR SINE MIR 82 144 -64 470 165 12 0 chr10 105240679 105240764 -40348524 + MIR SINE MIR 65 150 -112 492 275 0 42 chr10 105241212 105241354 -40347934 + MIR SINE MIR 37 172 -90 2445 46 0 0 chr10 105241369 105241689 -40347599 - AluY SINE Alu 0 320 1 735 287 102 35 chr10 105241696 105241987 -40347301 - LTR16C LTR ERVL -1 490 167 1650 254 83 35 chr10 105241987 105242555 -40346733 - MLT1G1 LTR MaLR 0 595 1 735 287 102 35 chr10 105242555 105242636 -40346652 - LTR16C LTR ERVL -324 167 93 605 236 83 46 chr10 105243550 105243782 -40345506 + MIR SINE MIR 3 247 -15 323 42 104 0 chr10 105243967 105244015 -40345273 + L1MB7 LINE L1 6129 6181 -3 2299 123 0 0 chr10 105245073 105245383 -40343905 - AluSg SINE Alu 0 310 1 309 299 158 0 chr10 105245384 105245548 -40343740 + MIR SINE MIR 62 251 -11 626 278 72 14 chr10 105245670 105245893 -40343395 + MIR SINE MIR 21 256 -6 1776 134 63 79 chr10 105245969 105246305 -40342983 + THE1C LTR MaLR 1 333 -42 2165 71 18 25 chr10 105246305 105246630 -40342658 - AluY SINE Alu 0 323 1 1776 134 63 79 chr10 105246630 105246672 -40342616 + THE1C LTR MaLR 333 374 -1 1697 157 0 0 chr10 105246778 105247027 -40342261 - AluSx SINE Alu -63 249 1 500 269 29 23 chr10 105247861 105248032 -40341256 + MIR SINE MIR 49 220 -42 500 287 108 69 chr10 105248764 105249518 -40339770 + L2 LINE L2 2425 3267 -5 236 279 108 70 chr10 105249536 105249694 -40339594 - L2 LINE L2 -176 3096 2933 563 284 80 53 chr10 105250144 105250521 -40338767 - L1ME4a LINE L1 -3 6118 5732 250 111 0 22 chr10 105250531 105250576 -40338712 + (TCCC)n Simple_repeat Simple_repeat 4 47 0 1497 167 32 0 chr10 105250578 105250830 -40338458 - AluJb SINE Alu -39 273 14 520 275 7 0 chr10 105250842 105250980 -40338308 - L1ME4a LINE L1 -394 5727 5589 1602 149 6 110 chr10 105251020 105251355 -40337933 - AluJb SINE Alu -1 301 2 745 205 97 48 chr10 105251823 105252124 -40337164 - LTR41 LTR ERVL 0 766 453 780 242 0 28 chr10 105252202 105252384 -40336904 - LTR41 LTR ERVL -590 183 7 1257 224 68 57 chr10 105252387 105252843 -40336445 - MLT1J LTR MaLR -50 461 1 446 337 18 0 chr10 105252959 105253122 -40336166 - MIR3 SINE MIR -14 194 29 326 243 155 17 chr10 105253542 105253723 -40335565 - LTR33 LTR ERVL -2 519 314 366 278 56 37 chr10 105253788 105253950 -40335338 - LTR33 LTR ERVL -321 200 36 1988 131 26 30 chr10 105254051 105254356 -40334932 - AluSx SINE Alu -8 304 1 403 209 155 8 chr10 105254429 105254558 -40334730 - MER117 DNA MER1_type -40 157 10 567 275 26 26 chr10 105255039 105255232 -40334056 + MER117 DNA MER1_type 5 197 0 325 313 10 0 chr10 105255273 105255371 -40333917 + MIR3 SINE MIR 77 176 -32 436 297 5 69 chr10 105256368 105256570 -40332718 - MER5A DNA MER1_type 0 189 1 199 291 77 17 chr10 105257361 105257478 -40331810 + MIR SINE MIR 22 145 -117 204 238 57 48 chr10 105258134 105258239 -40331049 + MIR SINE MIR 87 192 -70 194 312 8 80 chr10 105258338 105258463 -40330825 + L3 LINE CR1 1458 1573 -4 355 269 104 15 chr10 105258552 105258686 -40330602 - MER103 DNA DNA -20 146 1 2334 97 0 0 chr10 105258713 105259012 -40330276 - AluSq SINE Alu -13 300 2 180 302 39 73 chr10 105259066 105259245 -40330043 + MIR SINE MIR 69 241 -21 677 214 154 0 chr10 105259464 105259646 -40329642 - MER63A DNA MER1_type 0 210 1 2392 108 0 3 chr10 105259942 105260256 -40329032 - AluSq SINE Alu 0 313 1 518 258 124 5 chr10 105260425 105260588 -40328700 - MER5A DNA MER1_type 0 189 5 25 31 0 0 chr10 105260726 105260758 -40328530 + AT_rich Low_complexity Low_complexity 1 32 0 311 299 121 30 chr10 105261009 105261229 -40328059 - L1M4 LINE L1 -1501 4645 4396 2341 90 3 16 chr10 105261229 105261540 -40327748 - AluSx SINE Alu -5 307 1 311 299 121 30 chr10 105261540 105261583 -40327705 - L1M4 LINE L1 -1750 4396 4358 775 143 16 0 chr10 105261653 105261779 -40327509 - MER3 DNA MER1_type -24 185 58 1726 164 10 10 chr10 105261797 105262108 -40327180 - AluJb SINE Alu -1 311 1 294 253 48 0 chr10 105262224 105262307 -40326981 - MER117 DNA MER1_type 0 197 111 226 311 0 16 chr10 105262563 105262633 -40326655 + MIR SINE MIR 47 105 -103 464 268 36 24 chr10 105263204 105263372 -40325916 - MIR SINE MIR -33 229 60 309 278 46 9 chr10 105263560 105263668 -40325620 + MIR SINE MIR 30 141 -67 208 254 36 0 chr10 105263762 105263817 -40325471 + C-rich Low_complexity Low_complexity 5 61 0 626 311 48 4 chr10 105264079 105264307 -40324981 - MIR SINE MIR -7 255 18 424 300 134 9 chr10 105264719 105264942 -40324346 + Charlie2a DNA MER1_type 196 446 -2336 1030 208 77 4 chr10 105264942 105265202 -40324086 + Charlie2a DNA MER1_type 728 1006 -1856 380 259 83 0 chr10 105265203 105265311 -40323977 + Charlie2a DNA MER1_type 2745 2861 -1 1808 177 34 25 chr10 105265705 105266276 -40323012 - L1M4 LINE L1 -671 5503 4936 360 0 0 0 chr10 105266724 105266764 -40322524 + (TG)n Simple_repeat Simple_repeat 2 41 0 230 323 65 24 chr10 105266766 105266890 -40322398 - MIR SINE MIR -57 205 77 938 280 105 35 chr10 105266923 105267211 -40322077 - MLT1I LTR MaLR 0 409 88 2111 121 3 7 chr10 105267211 105267517 -40321771 + AluSx SINE Alu 1 305 -7 938 280 105 35 chr10 105267517 105267599 -40321689 - MLT1I LTR MaLR -321 88 13 259 247 144 41 chr10 105267949 105268046 -40321242 + L2 LINE L2 3192 3298 -15 183 222 19 157 chr10 105268285 105268393 -40320895 + L2 LINE L2 2657 2749 -565 522 241 60 0 chr10 105268431 105268564 -40320724 - MIR SINE MIR -31 231 91 435 376 69 12 chr10 105268992 105269327 -40319961 + L2 LINE L2 2918 3271 -1 252 233 23 58 chr10 105269470 105269556 -40319732 + L2 LINE L2 3188 3270 -2 340 203 0 0 chr10 105269963 105270027 -40319261 - L2 LINE L2 -3 3310 3247 1963 136 7 26 chr10 105270501 105270810 -40318478 + AluJb SINE Alu 1 303 -9 4112 59 102 0 chr10 105271518 105272059 -40317229 + LTR66 LTR ERVL 15 610 0 2257 109 0 3 chr10 105272707 105273010 -40316278 + AluSq SINE Alu 1 302 -11 838 286 133 27 chr10 105273316 105273729 -40315559 - Tigger8 DNA MER2_type -18 648 192 1308 164 85 42 chr10 105274532 105274862 -40314426 + MER2 DNA MER2_type 1 344 0 225 326 113 28 chr10 105275228 105275369 -40313919 + MIR3 SINE MIR 31 183 -25 526 279 0 14 chr10 105276104 105276244 -40313044 + MER5B DNA MER1_type 3 140 -38 2911 147 20 46 chr10 105276281 105276820 -40312468 + MER74A LTR ERVL 34 558 0 454 586 0 6 chr10 105277578 105277759 -40311529 + polypyrimidine Low_complexity Low_complexity 1 180 0 242 67 0 0 chr10 105277759 105277789 -40311499 + (TC)n Simple_repeat Simple_repeat 2 31 0 197 333 107 27 chr10 105277789 105277939 -40311349 - L2 LINE L2 -1 3312 3151 243 318 130 13 chr10 105278000 105278154 -40311134 + MIR SINE MIR 78 249 -13 1854 146 0 40 chr10 105278437 105278760 -40310528 - AluJb SINE Alu -2 310 1 620 292 39 105 chr10 105278881 105279244 -40310044 - L2 LINE L2 0 3272 2934 423 314 160 44 chr10 105279368 105279868 -40309420 - L2 LINE L2 -568 2746 2189 567 234 32 26 chr10 105280597 105280751 -40308537 + MIR SINE MIR 95 249 -13 276 250 0 0 chr10 105280832 105280892 -40308396 + MIR3 SINE MIR 135 194 -14 407 295 81 40 chr10 105281552 105281593 -40307695 - MIR SINE MIR -102 160 122 2214 117 0 0 chr10 105281593 105281900 -40307388 + AluSx SINE Alu 1 307 -5 407 295 81 40 chr10 105281900 105282007 -40307281 - MIR SINE MIR -140 122 6 2046 100 7 7 chr10 105282294 105282584 -40306704 - AluSc SINE Alu -19 290 1 310 167 17 17 chr10 105283040 105283100 -40306188 + MER5A DNA MER1_type 9 68 -121 1685 132 45 17 chr10 105283568 105283697 -40305591 - L1MB5 LINE L1 -8 6166 6042 2954 74 62 7 chr10 105283697 105284073 -40305215 + MLT2A1 LTR ERVL 1 404 -40 360 0 0 0 chr10 105284073 105284113 -40305175 + (CA)n Simple_repeat Simple_repeat 2 41 0 2954 74 62 7 chr10 105284113 105284157 -40305131 + MLT2A1 LTR ERVL 404 444 0 1685 132 45 17 chr10 105284157 105284314 -40304974 - L1MB5 LINE L1 -132 6042 5872 1427 172 46 66 chr10 105284597 105284899 -40304389 - AluJo SINE Alu -16 296 1 2083 119 0 0 chr10 105285265 105285559 -40303729 - AluSg SINE Alu -16 294 1 714 179 179 17 chr10 105285657 105285836 -40303452 + MER3 DNA MER1_type 2 209 0 2220 96 0 0 chr10 105286205 105286507 -40302781 + AluSg1 SINE Alu 1 302 -7 326 326 160 19 chr10 105287645 105287843 -40301445 + MIR SINE MIR 27 250 -12 498 253 138 68 chr10 105287936 105288345 -40300943 + MLT1G1 LTR MaLR 104 594 -1 406 284 79 16 chr10 105288908 105289035 -40300253 + MIR3 SINE MIR 42 176 -32 694 264 141 0 chr10 105289644 105289871 -40299417 + MIR SINE MIR 2 260 -2 204 273 0 0 chr10 105290373 105290417 -40298871 + G-rich Low_complexity Low_complexity 4 47 0 285 277 143 17 chr10 105290543 105290662 -40298626 + MIR3 SINE MIR 15 148 -60 785 238 99 5 chr10 105290695 105290897 -40298391 - MIR SINE MIR -29 233 13 2163 87 7 0 chr10 105291880 105292167 -40297121 - AluSc SINE Alu -20 289 1 444 237 73 56 chr10 105292406 105292606 -40296682 - MIR SINE MIR -50 212 15 367 253 0 11 chr10 105293083 105293170 -40296118 + LTR16C LTR ERVL 172 257 -234 407 125 68 0 chr10 105293183 105293271 -40296017 + LTR16C LTR ERVL 368 461 -30 678 131 11 125 chr10 105293274 105293352 -40295936 + L1MB4 LINE L1 6050 6135 -66 297 0 0 0 chr10 105293352 105293385 -40295903 + (TA)n Simple_repeat Simple_repeat 1 33 0 2310 99 0 0 chr10 105293388 105293700 -40295588 - AluSx SINE Alu 0 312 1 678 131 11 125 chr10 105293700 105293795 -40295493 + L1MB4 LINE L1 6137 6197 -4 218 179 0 0 chr10 105294229 105294268 -40295020 - L2 LINE L2 -32 3240 3202 * 605 263 51 28 chr10 105294236 105294453 -40294835 - MIR SINE MIR -33 229 8 180 321 18 0 chr10 105294972 105295028 -40294260 - L2 LINE L2 -16 3256 3200 1249 263 89 49 chr10 105295228 105296011 -40293277 - L2 LINE L2 -46 3267 2450 227 359 120 26 chr10 105296808 105296925 -40292363 - L2 LINE L2 -19 3253 3126 616 51 0 0 chr10 105298632 105298711 -40290577 + L1PA6 LINE L1 6071 6149 -5 201 74 0 0 chr10 105298991 105299018 -40290270 + (A)n Simple_repeat Simple_repeat 1 27 0 265 258 227 31 chr10 105299102 105299199 -40290089 - MIR SINE MIR -140 122 7 362 254 96 23 chr10 105299468 105299623 -40289665 + MIR SINE MIR 89 250 -12 621 150 10 0 chr10 105299777 105299877 -40289411 + 5S rRNA rRNA 1 101 -20 319 232 32 72 chr10 105299897 105300022 -40289266 + MIR3 SINE MIR 53 172 -36 196 281 104 10 chr10 105300637 105300733 -40288555 - L2 LINE L2 -43 3229 3125 1268 167 19 28 chr10 105302168 105302384 -40286904 - MER20 DNA MER1_type -5 214 1 225 184 0 0 chr10 105303591 105303640 -40285648 + (TTAA)n Simple_repeat Simple_repeat 3 51 0 818 149 0 0 chr10 105303643 105303764 -40285524 - FLAM_C SINE Alu -12 121 1 971 254 48 12 chr10 105304443 105304691 -40284597 + MIR SINE MIR 6 262 0 407 228 7 132 chr10 105304889 105304949 -40284339 - MIR SINE MIR -65 143 77 926 130 0 0 chr10 105304949 105305080 -40284208 + FLAM_C SINE Alu 3 133 0 407 228 7 132 chr10 105305080 105305194 -40284094 - MIR SINE MIR -131 77 3 1493 254 113 7 chr10 105305359 105305800 -40283488 - LTR16C LTR ERVL -2 489 2 506 136 49 0 chr10 105305939 105306020 -40283268 + MER53 DNA DNA 105 189 0 1711 159 7 3 chr10 105306149 105306439 -40282849 - AluJb SINE Alu -11 301 11 630 266 210 0 chr10 105306596 105306810 -40282478 + MIR SINE MIR 1 259 -3 845 204 104 0 chr10 105307752 105307953 -40281335 - MER58A DNA MER1_type -2 222 1 546 301 187 5 chr10 105308148 105308367 -40280921 - MIR SINE MIR 0 262 4 439 236 49 62 chr10 105308384 105308528 -40280760 + L2 LINE L2 3167 3308 -5 198 118 0 0 chr10 105309001 105309035 -40280253 + (TCCA)n Simple_repeat Simple_repeat 1 34 0 441 219 0 88 chr10 105309217 105309331 -40279957 + L1MC4 LINE L1 6598 6701 -1341 850 149 0 0 chr10 105309339 105309473 -40279815 - FAM SINE Alu -50 135 2 445 282 35 0 chr10 105309476 105309650 -40279638 + L1ME3A LINE L1 5771 5950 -220 23 0 0 0 chr10 105309805 105309828 -40279460 + AT_rich Low_complexity Low_complexity 1 23 0 1565 161 0 71 chr10 105309997 105310383 -40278905 + AluJb SINE Alu 1 362 0 1620 171 3 26 chr10 105310954 105311259 -40278029 + AluJo SINE Alu 1 298 -14 1812 122 25 7 chr10 105312008 105312332 -40276956 + AluSx SINE Alu 1 329 0 2142 192 81 6 chr10 105312341 105312809 -40276479 + L1MC4a LINE L1 7303 7805 -3 203 280 183 0 chr10 105313039 105313132 -40276156 + MIR SINE MIR 12 121 -141 641 246 24 24 chr10 105313791 105313958 -40275330 + MIR SINE MIR 88 254 -8 219 114 0 0 chr10 105313959 105313994 -40275294 + (TTA)n Simple_repeat Simple_repeat 1 35 0 854 286 0 13 chr10 105314845 105315069 -40274219 + MIR SINE MIR 9 229 -33 1631 211 31 65 chr10 105315117 105315596 -40273692 - MLT1D LTR MaLR 0 505 43 267 233 258 17 chr10 105315881 105316001 -40273287 - MER117 DNA MER1_type 0 197 49 2063 128 0 0 chr10 105316027 105316324 -40272964 + AluSx SINE Alu 4 300 -12 1975 104 6 41 chr10 105316327 105316643 -40272645 + AluSg SINE Alu 1 305 -5 26 30 0 0 chr10 105316649 105316682 -40272606 + AT_rich Low_complexity Low_complexity 1 33 0 387 0 0 0 chr10 105317716 105317759 -40271529 + (CA)n Simple_repeat Simple_repeat 1 43 0 1389 179 61 11 chr10 105317772 105318051 -40271237 - AluJb SINE Alu -19 293 1 1426 183 161 45 chr10 105318051 105318406 -40270882 + MLT2B3 LTR ERVL 1 396 -158 720 142 9 0 chr10 105318410 105318523 -40270765 + MSTD-int LTR MaLR 1621 1734 -1 1344 193 203 75 chr10 105318524 105318845 -40270443 + MSTD LTR MaLR 1 393 -3 420 37 0 0 chr10 105318845 105318899 -40270389 + (CA)n Simple_repeat Simple_repeat 2 55 0 407 293 40 45 chr10 105319169 105319367 -40269921 + L2 LINE L2 3117 3313 0 220 227 93 40 chr10 105319690 105319765 -40269523 - L2 LINE L2 -8 3264 3186 1780 155 3 16 chr10 105321061 105321364 -40267924 - AluJo SINE Alu -13 299 1 392 81 0 16 chr10 105321476 105321538 -40267750 + (TG)n Simple_repeat Simple_repeat 2 62 0 186 167 0 0 chr10 105321829 105321865 -40267423 + (TGAG)n Simple_repeat Simple_repeat 4 39 0 255 340 107 0 chr10 105322068 105322171 -40267117 + MIR SINE MIR 33 146 -62 1685 190 0 3 chr10 105322544 105322943 -40266345 + AluJb SINE Alu 1 398 0 231 342 0 60 chr10 105323422 105323539 -40265749 + L2 LINE L2 3163 3272 0 488 254 27 0 chr10 105323716 105323826 -40265462 + MIR SINE MIR 48 160 -102 836 251 77 0 chr10 105324498 105324705 -40264583 + MER20B DNA MER1_type 1 223 -560 219 236 0 42 chr10 105324714 105324786 -40264502 + (TATATG)n Simple_repeat Simple_repeat 2 70 0 568 242 91 3 chr10 105325137 105325599 -40263689 + MER20B DNA MER1_type 225 783 0 247 297 7 90 chr10 105326183 105326338 -40262950 + L2 LINE L2 3165 3306 -7 2073 119 0 0 chr10 105326379 105326674 -40262614 + AluSx SINE Alu 1 295 -17 359 333 26 13 chr10 105326684 105326837 -40262451 - MIR SINE MIR -19 243 89 592 285 149 9 chr10 105327615 105327843 -40261445 + MIR SINE MIR 3 262 0 603 296 54 5 chr10 105328731 105328934 -40260354 - MIR SINE MIR -48 214 2 2047 117 10 0 chr10 105329455 105329745 -40259543 - AluSx SINE Alu -19 293 1 264 340 49 49 chr10 105330919 105331122 -40258166 - L2 LINE L2 -85 3187 2985 331 221 51 70 chr10 105332582 105332694 -40256594 + L1ME LINE L1 5347 5457 -664 2304 75 3 0 chr10 105332694 105332986 -40256302 + AluY SINE Alu 1 293 -18 331 221 51 70 chr10 105332986 105333031 -40256257 + L1ME LINE L1 5457 5501 -620 537 203 86 23 chr10 105333361 105333489 -40255799 + MER5C DNA MER1_type 14 149 -175 258 32 0 0 chr10 105333490 105333521 -40255767 + (TAA)n Simple_repeat Simple_repeat 3 33 0 2156 105 0 3 chr10 105333526 105333822 -40255466 + AluSg SINE Alu 1 295 -15 2269 97 0 6 chr10 105334144 105334455 -40254833 - AluSq SINE Alu -4 309 1 284 345 101 0 chr10 105334541 105334660 -40254628 + MIR SINE MIR 14 144 -118 180 0 0 0 chr10 105335768 105335788 -40253500 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1781 98 4 0 chr10 105335797 105336033 -40253255 - AluSp SINE Alu -76 237 1 23 0 0 0 chr10 105336033 105336056 -40253232 + AT_rich Low_complexity Low_complexity 1 23 0 527 300 22 22 chr10 105336135 105336358 -40252930 - L1MC/D LINE L1 -2147 5661 5439 1916 83 0 11 chr10 105336460 105336724 -40252564 - AluY SINE Alu -50 261 1 500 298 80 47 chr10 105336725 105337365 -40251923 - L1MC/D LINE L1 -751 5395 4735 283 213 75 0 chr10 105337385 105337465 -40251823 - MLT1J LTR MaLR -11 500 415 1878 131 3 20 chr10 105337478 105337783 -40251505 + AluSx SINE Alu 1 300 -12 2235 94 133 27 chr10 105337845 105338250 -40251038 + LTR7 LTR ERV1 1 448 -2 8388 92 26 16 chr10 105338258 105339500 -40249788 + HERVH LTR ERV1 785 2038 -5675 2108 111 0 3 chr10 105339601 105339899 -40249389 - AluSx SINE Alu -15 297 1 330 195 164 55 chr10 105339900 105340028 -40249260 + MER5C DNA MER1_type 183 324 0 417 287 160 0 chr10 105340047 105340197 -40249091 + MER5A DNA MER1_type 9 182 -7 344 266 135 83 chr10 105340962 105341154 -40248134 - MER102a DNA MER1_type -16 314 113 813 127 0 8 chr10 105341182 105341300 -40247988 - AluJb SINE Alu -194 118 2 1812 165 0 10 chr10 105341333 105341636 -40247652 + AluSx SINE Alu 1 300 -12 2479 97 19 38 chr10 105341663 105342034 -40247254 + THE1B LTR MaLR 1 364 0 198 0 0 0 chr10 105343769 105343791 -40245497 + (TG)n Simple_repeat Simple_repeat 1 22 0 2192 88 24 0 chr10 105343899 105344193 -40245095 + AluSq SINE Alu 1 301 -12 930 137 0 0 chr10 105345692 105345831 -40243457 + FLAM_C SINE Alu 1 139 -4 5782 140 32 66 chr10 105346204 105347014 -40242274 + L1MC1 LINE L1 5127 5884 -449 1793 132 14 20 chr10 105347014 105347310 -40241978 + AluSq SINE Alu 1 294 -19 5782 140 32 66 chr10 105347310 105347743 -40241545 + L1MC1 LINE L1 5884 6330 -3 841 142 64 0 chr10 105347743 105347884 -40241404 + AluJb SINE Alu 129 278 -34 447 63 0 0 chr10 105347889 105347952 -40241336 + (CAGGA)n Simple_repeat Simple_repeat 2 64 0 25 31 0 0 chr10 105348069 105348101 -40241187 + AT_rich Low_complexity Low_complexity 1 32 0 816 137 6 8 chr10 105348192 105348382 -40240906 + L1MB8 LINE L1 5655 5849 -340 2115 82 0 7 chr10 105348431 105348712 -40240576 + AluSq SINE Alu 1 279 -34 2777 9 0 6 chr10 105348712 105349030 -40240258 + AluYb8 SINE Alu 1 317 -1 188 65 0 32 chr10 105349047 105349078 -40240210 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 1770 135 16 68 chr10 105349078 105349448 -40239840 + L1MB8 LINE L1 5817 6167 -11 2345 93 7 0 chr10 105349460 105349770 -40239518 + AluSx SINE Alu 1 312 0 433 259 67 86 chr10 105349882 105350431 -40238857 + L1ME4a LINE L1 5335 5933 -188 2451 57 0 0 chr10 105352250 105352551 -40236737 + AluY SINE Alu 1 301 -10 490 281 85 18 chr10 105352798 105353021 -40236267 - MIR SINE MIR -26 236 1 250 297 117 0 chr10 105353512 105353623 -40235665 - MIR SINE MIR -6 256 133 923 262 58 8 chr10 105353837 105354200 -40235088 - MER113 DNA MER1_type? -73 448 68 638 168 32 0 chr10 105354200 105354325 -40234963 + L1MB4 LINE L1 6046 6174 -6 332 186 0 0 chr10 105354342 105354401 -40234887 + L1MB8 LINE L1 6094 6152 -26 276 259 12 0 chr10 105354401 105354486 -40234802 - MER113 DNA MER1_type? -435 86 1 2125 110 0 7 chr10 105354960 105355259 -40234029 + AluSx SINE Alu 1 297 -15 1471 146 114 11 chr10 105355621 105355902 -40233386 + AluSg SINE Alu 1 310 0 2001 79 75 0 chr10 105356007 105356287 -40233001 + AluSx SINE Alu 1 301 -11 193 322 11 11 chr10 105356602 105356692 -40232596 - L2 LINE L2 -292 2980 2891 210 118 0 0 chr10 105357772 105357806 -40231482 + (CAT)n Simple_repeat Simple_repeat 3 36 0 1834 157 10 3 chr10 105357871 105358171 -40231117 + AluJb SINE Alu 1 302 -10 258 358 17 33 chr10 105359059 105359179 -40230109 - MIR SINE MIR -62 146 29 363 215 145 97 chr10 105360390 105360618 -40228670 + MIR SINE MIR 20 258 -4 351 271 114 43 chr10 105360610 105360750 -40228538 + L2 LINE L2 3164 3313 0 * 1195 274 82 30 chr10 105360943 105361000 -40228288 - LTR16B LTR ERVL 0 464 411 1972 127 0 0 chr10 105361000 105361305 -40227983 - AluSx SINE Alu 0 305 1 1195 274 82 30 chr10 105361305 105361687 -40227601 - LTR16B LTR ERVL -53 411 1 573 276 191 0 chr10 105361695 105361905 -40227383 + MIR SINE MIR 13 262 0 27 29 0 0 chr10 105361911 105361945 -40227343 + AT_rich Low_complexity Low_complexity 1 34 0 264 314 8 50 chr10 105363535 105363656 -40225632 + MIR3 SINE MIR 87 202 -6 483 18 0 0 chr10 105363685 105363741 -40225547 + (CA)n Simple_repeat Simple_repeat 1 56 0 1642 160 0 62 chr10 105364068 105364265 -40225023 - AluJb SINE Alu -7 305 134 2194 100 0 3 chr10 105364265 105364556 -40224732 + AluSx SINE Alu 1 290 -22 1642 160 0 62 chr10 105364556 105364683 -40224605 - AluJb SINE Alu -178 134 1 28 29 0 0 chr10 105364688 105364723 -40224565 + AT_rich Low_complexity Low_complexity 1 35 0 267 327 195 0 chr10 105365193 105365352 -40223936 - L3 LINE CR1 -4 1573 1384 2121 118 0 0 chr10 105365359 105365655 -40223633 + AluSx SINE Alu 1 296 -16 605 275 103 46 chr10 105365705 105365967 -40223321 - MLT1L LTR MaLR -3 611 232 1641 85 144 30 chr10 105366528 105366798 -40222490 - AluSx SINE Alu -2 310 10 332 288 97 59 chr10 105368018 105368306 -40220982 + LTR16C LTR ERVL 193 491 0 1808 152 7 3 chr10 105368657 105368946 -40220342 - AluJo SINE Alu -20 292 3 2002 133 0 0 chr10 105369004 105369297 -40219991 + AluSx SINE Alu 1 293 -19 2353 62 0 3 chr10 105369408 105369713 -40219575 + AluY SINE Alu 1 304 -7 2049 88 3 3 chr10 105369713 105370030 -40219258 + AluY SINE Alu 1 317 0 1646 174 6 83 chr10 105370030 105370561 -40218727 + L1MB3 LINE L1 5573 6022 -157 3585 135 0 8 chr10 105370561 105371079 -40218209 - MER1A DNA MER1_type 0 529 16 674 162 29 0 chr10 105371079 105371215 -40218073 + L1MB3 LINE L1 6016 6155 -28 1690 149 0 0 chr10 105371313 105371582 -40217706 + AluSx SINE Alu 39 307 -5 329 249 171 49 chr10 105371844 105372049 -40217239 - MIR SINE MIR -32 230 1 28 48 0 0 chr10 105372078 105372120 -40217168 + AT_rich Low_complexity Low_complexity 1 42 0 1898 147 20 0 chr10 105372147 105372276 -40217012 + AluSx SINE Alu 1 126 -186 180 0 0 0 chr10 105372276 105372296 -40216992 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1898 147 20 0 chr10 105372296 105372472 -40216816 + AluSx SINE Alu 126 312 0 1331 178 87 7 chr10 105372540 105372815 -40216473 - AluJb SINE Alu -15 297 1 742 176 0 0 chr10 105372827 105372952 -40216336 - AluSg/x SINE Alu -16 296 172 1794 130 0 14 chr10 105372952 105373236 -40216052 + AluSx SINE Alu 33 312 0 2262 198 41 87 chr10 105373238 105373880 -40215408 - LTR8 LTR ERV1 -76 561 1 1892 134 10 33 chr10 105374041 105374347 -40214941 + AluSx SINE Alu 1 299 -13 2635 170 110 73 chr10 105374642 105375343 -40213945 + LTR8A LTR ERV1 1 727 0 254 61 0 0 chr10 105375461 105375494 -40213794 - MLT1G LTR MaLR -5 585 553 1998 128 0 13 chr10 105375945 105376250 -40213038 + AluSq SINE Alu 1 301 -12 2270 74 0 0 chr10 105376252 105376557 -40212731 + AluY SINE Alu 1 305 0 576 193 22 67 chr10 105376715 105376850 -40212438 - MER5A DNA MER1_type 0 189 61 31 26 0 0 chr10 105376874 105376912 -40212376 + AT_rich Low_complexity Low_complexity 1 38 0 327 197 70 0 chr10 105376929 105377000 -40212288 - MER5A DNA MER1_type -113 76 1 463 296 57 6 chr10 105377442 105377601 -40211687 - MIR SINE MIR -50 212 46 1905 126 16 13 chr10 105377815 105378124 -40211164 + AluSx SINE Alu 1 310 -2 1972 144 3 0 chr10 105378173 105378478 -40210810 + AluSx SINE Alu 1 306 -6 2178 199 16 129 chr10 105378487 105378658 -40210630 - L1ME1 LINE L1 -69 6097 5908 1630 192 7 0 chr10 105378658 105378950 -40210338 - AluJb SINE Alu -18 294 1 2178 199 16 129 chr10 105378950 105379068 -40210220 - L1ME1 LINE L1 -258 5908 5778 1951 152 0 0 chr10 105379068 105379371 -40209917 - AluSx SINE Alu -9 303 1 2178 199 16 129 chr10 105379371 105379854 -40209434 - L1PB1 LINE L1 -388 5778 5412 2507 88 6 25 chr10 105379856 105380036 -40209252 + L1PB1 LINE L1 5794 5965 -186 2643 10 0 3 chr10 105380036 105380337 -40208951 + AluYa5 SINE Alu 1 300 -11 2507 88 6 25 chr10 105380337 105380520 -40208768 + L1PB1 LINE L1 5965 6150 -1 1820 118 3 35 chr10 105380527 105380842 -40208446 + AluSx SINE Alu 1 305 -7 2332 80 3 13 chr10 105380844 105381158 -40208130 + AluSp SINE Alu 1 311 -2 385 189 110 47 chr10 105381183 105381310 -40207978 + L1MC/D LINE L1 5290 5427 -742 24 53 0 0 chr10 105381310 105381348 -40207940 + AT_rich Low_complexity Low_complexity 1 38 0 996 252 3 17 chr10 105381438 105381732 -40207556 + L1 LINE L1 3821 4110 -2036 2052 108 0 3 chr10 105381749 105382037 -40207251 - AluSx SINE Alu -24 288 2 310 330 43 76 chr10 105382095 105382280 -40207008 + L1ME3 LINE L1 5692 5870 -292 2061 90 21 7 chr10 105382366 105382654 -40206634 + AluSq SINE Alu 1 292 -21 799 135 0 0 chr10 105382876 105382987 -40206301 + AluSc SINE Alu 2 112 -197 1081 51 0 0 chr10 105383126 105383263 -40206025 - AluYa5/8 SINE Alu -8 302 166 454 265 38 81 chr10 105383271 105383335 -40205953 + L1MC/D LINE L1 5561 5626 -495 4287 70 7 7 chr10 105383335 105383889 -40205399 - MER41A LTR ERV1 0 554 1 454 265 38 81 chr10 105383889 105384094 -40205194 + L1MC/D LINE L1 5626 5824 -297 2374 66 3 3 chr10 105384097 105384401 -40204887 + AluY SINE Alu 1 304 -7 2038 125 3 0 chr10 105384564 105384861 -40204427 + AluSx SINE Alu 1 298 -14 1253 263 101 34 chr10 105385003 105385555 -40203733 + L1ME LINE L1 41 629 -5441 509 156 73 0 chr10 105385584 105385680 -40203608 + L1ME LINE L1 2590 2692 -3388 382 184 149 18 chr10 105385726 105385840 -40203448 + L1ME LINE L1 2672 2800 -3280 1047 197 0 5 chr10 105385845 105386043 -40203245 - AluJb SINE Alu -14 298 102 2747 236 47 44 chr10 105386082 105386467 -40202821 + L1ME LINE L1 2807 3189 -2891 315 0 0 0 chr10 105386467 105386502 -40202786 + (CA)n Simple_repeat Simple_repeat 2 36 0 2747 236 47 44 chr10 105386502 105386545 -40202743 + L1ME LINE L1 3189 3230 -2850 356 153 0 0 chr10 105386545 105386604 -40202684 + L1MA3 LINE L1 6247 6305 0 2747 236 47 44 chr10 105386604 105387125 -40202163 + L1ME LINE L1 3230 3760 -2320 574 254 97 32 chr10 105387241 105387426 -40201862 + MIR3 SINE MIR 9 205 -3 2422 65 10 0 chr10 105387618 105387926 -40201362 - AluY SINE Alu 0 311 1 199 200 0 83 chr10 105387965 105388025 -40201263 + MIR SINE MIR 2 56 -206 2042 109 0 10 chr10 105388037 105388330 -40200958 - AluSx SINE Alu -22 290 1 418 244 281 6 chr10 105388335 105388499 -40200789 + MIR SINE MIR 48 256 -6 966 232 30 67 chr10 105388509 105388806 -40200482 - MLT1J LTR MaLR -2 509 224 377 252 24 32 chr10 105389000 105389123 -40200165 - MLT1J LTR MaLR -381 130 9 422 246 19 168 chr10 105389190 105389272 -40200016 + L3 LINE CR1 737 830 -747 2209 106 0 0 chr10 105389272 105389584 -40199704 - AluSx SINE Alu 0 312 1 422 246 19 168 chr10 105389584 105389769 -40199519 + L3 LINE CR1 830 964 -613 201 333 0 13 chr10 105389881 105389956 -40199332 + MIR SINE MIR 49 122 -140 313 272 49 0 chr10 105390457 105390538 -40198750 + MIR3 SINE MIR 81 165 -43 680 217 57 13 chr10 105390875 105390978 -40198310 + MIR SINE MIR 7 121 -141 1998 120 0 19 chr10 105390978 105391287 -40198001 - AluSg SINE Alu -7 303 1 680 217 57 13 chr10 105391287 105391340 -40197948 + MIR SINE MIR 121 170 -92 1754 184 55 52 chr10 105392327 105392400 -40196888 + MLT1D LTR MaLR 103 174 -331 2737 13 0 0 chr10 105392400 105392709 -40196579 - AluYa5 SINE Alu -2 309 1 1754 184 55 52 chr10 105392709 105393037 -40196251 + MLT1D LTR MaLR 174 505 0 465 326 88 14 chr10 105393248 105393463 -40195825 + MIR SINE MIR 20 250 -12 24 100 0 0 chr10 105394061 105394141 -40195147 + GC_rich Low_complexity Low_complexity 1 80 0 243 316 0 13 chr10 105395007 105395086 -40194202 - L2 LINE L2 -75 3238 3161 231 253 330 9 chr10 105395509 105395742 -40193546 - L2 LINE L2 -175 3138 2831 1709 190 35 19 chr10 105396238 105396607 -40192681 - L1MB8 LINE L1 0 6178 5804 239 276 191 9 chr10 105397088 105397193 -40192095 - L3 LINE CR1 -392 1185 1062 2199 98 14 0 chr10 105397296 105397593 -40191695 - AluSx SINE Alu -11 301 1 1862 137 0 3 chr10 105398260 105398574 -40190714 - AluSx SINE Alu 0 313 1 2406 67 0 0 chr10 105398665 105398964 -40190324 - AluY SINE Alu -12 299 1 5534 147 43 39 chr10 105398974 105400053 -40189235 - L1MC3 LINE L1 -1 7784 6702 673 285 72 30 chr10 105400108 105400343 -40188945 + MIR SINE MIR 4 248 -14 2316 85 0 0 chr10 105400387 105400682 -40188606 - AluSq SINE Alu -18 295 1 1064 125 0 30 chr10 105400959 105401040 -40188248 - AluJb SINE Alu -99 213 138 2352 72 0 22 chr10 105401040 105401358 -40187930 - AluY SINE Alu 0 311 1 1064 125 0 30 chr10 105401358 105401444 -40187844 - AluJb SINE Alu -174 138 51 375 174 51 0 chr10 105401552 105401650 -40187638 + CT-rich Low_complexity Low_complexity 3 105 0 2046 109 7 7 chr10 105401652 105401954 -40187334 - AluY SINE Alu -9 302 1 430 284 34 14 chr10 105402076 105402224 -40187064 - L1ME1 LINE L1 -6 6160 6010 258 105 0 0 chr10 105402224 105402262 -40187026 + (T)n Simple_repeat Simple_repeat 1 38 0 868 134 8 15 chr10 105402921 105403055 -40186233 - FLAM_C SINE Alu 0 133 1 1953 131 13 0 chr10 105403065 105403363 -40185925 - AluSx SINE Alu -10 302 1 1127 184 79 54 chr10 105403363 105403442 -40185846 - L1ME1 LINE L1 -315 5851 5775 1895 132 33 7 chr10 105403442 105403746 -40185542 - AluSx SINE Alu 0 312 1 1127 184 79 54 chr10 105403746 105403981 -40185307 - L1ME1 LINE L1 -391 5775 5529 1117 174 0 55 chr10 105404087 105404266 -40185022 - AluJo SINE Alu -2 310 146 1961 140 0 0 chr10 105404266 105404559 -40184729 - AluSx SINE Alu -19 293 1 1117 174 0 55 chr10 105404559 105404615 -40184673 - AluJo SINE Alu -166 146 88 285 177 138 161 chr10 105405363 105405445 -40183843 + LTR16A LTR ERVL 316 395 -55 1981 135 0 10 chr10 105405445 105405606 -40183682 - AluJb SINE Alu -18 294 136 2073 103 10 35 chr10 105405606 105405918 -40183370 - AluSq SINE Alu -9 304 1 1981 135 0 10 chr10 105405918 105406053 -40183235 - AluJb SINE Alu -176 136 1 285 177 138 161 chr10 105406053 105406100 -40183188 + LTR16A LTR ERVL 395 442 -8 454 293 64 45 chr10 105406382 105406607 -40182681 - MIR SINE MIR -27 235 10 205 223 62 115 chr10 105406672 105406750 -40182538 + MIR SINE MIR 20 90 -118 859 154 0 0 chr10 105406750 105406880 -40182408 - FLAM_C SINE Alu -2 131 2 205 223 62 115 chr10 105406880 105406931 -40182357 + MIR SINE MIR 90 142 -66 488 262 58 23 chr10 105406958 105407130 -40182158 + MIR SINE MIR 36 213 -49 1309 216 135 62 chr10 105407478 105407611 -40181677 + MLT1D LTR MaLR 5 127 -378 2040 94 3 56 chr10 105407611 105407930 -40181358 - AluSx SINE Alu -10 302 1 1309 216 135 62 chr10 105407930 105408198 -40181090 + MLT1D LTR MaLR 127 447 -58 1595 182 0 30 chr10 105408198 105408500 -40180788 + AluJb SINE Alu 4 296 -16 1309 216 135 62 chr10 105408500 105408564 -40180724 + MLT1D LTR MaLR 447 505 0 403 300 94 0 chr10 105409077 105409247 -40180041 + L1ME4a LINE L1 5731 5916 -205 449 199 66 59 chr10 105409250 105409386 -40179902 + MIR SINE MIR 125 261 -1 1041 163 0 0 chr10 105409412 105409584 -40179704 - AluSg/x SINE Alu -7 305 134 2309 92 0 0 chr10 105409584 105409890 -40179398 - AluSq SINE Alu -7 306 1 789 106 0 0 chr10 105409908 105410012 -40179276 - U6 snRNA snRNA -3 104 1 936 240 75 60 chr10 105410035 105410368 -40178920 - MER46C DNA MER2_type 0 338 1 180 0 0 0 chr10 105410443 105410463 -40178825 + (TTTTTA)n Simple_repeat Simple_repeat 2 21 0 254 179 18 0 chr10 105410797 105410853 -40178435 + C-rich Low_complexity Low_complexity 1 57 0 2103 114 0 0 chr10 105410853 105411143 -40178145 - AluSg SINE Alu -20 290 1 1584 178 3 13 chr10 105411195 105411493 -40177795 + AluJo SINE Alu 1 295 -17 2148 112 0 13 chr10 105411502 105411815 -40177473 + AluSx SINE Alu 4 312 0 22 0 0 0 chr10 105413041 105413063 -40176225 + AT_rich Low_complexity Low_complexity 1 22 0 2265 76 0 0 chr10 105413063 105413351 -40175937 + AluSq SINE Alu 1 288 -25 373 219 9 9 chr10 105413371 105413476 -40175812 + CT-rich Low_complexity Low_complexity 1 105 0 474 167 0 0 chr10 105413476 105413554 -40175734 - AluS SINE Alu -14 297 220 635 250 27 0 chr10 105413580 105413728 -40175560 + FRAM SINE Alu 24 175 -1 586 183 8 8 chr10 105413743 105413798 -40175490 + L1MC2 LINE L1 3292 3346 -2800 1830 130 42 3 chr10 105413798 105414082 -40175206 + AluSx SINE Alu 1 295 -17 586 183 8 8 chr10 105414082 105414157 -40175131 + L1MC2 LINE L1 3345 3422 -2724 1608 174 10 3 chr10 105414159 105414447 -40174841 - Tigger1 DNA MER2_type -2128 290 1 3481 161 31 47 chr10 105414447 105414971 -40174317 + L1MC2 LINE L1 4986 5517 -827 1265 137 199 50 chr10 105414971 105415233 -40174055 + AluJo SINE Alu 1 301 -1 3481 161 31 47 chr10 105415233 105415492 -40173796 + L1MC2 LINE L1 5517 5779 -565 1754 147 126 9 chr10 105415492 105415826 -40173462 - THE1C LTR MaLR -2 373 1 3481 161 31 47 chr10 105415826 105416198 -40173090 + L1MC2 LINE L1 5779 6308 -36 318 250 24 122 chr10 105416348 105416512 -40172776 + MLT1J LTR MaLR 162 309 -202 2698 95 58 21 chr10 105416563 105416995 -40172293 - LTR7 LTR ERV1 -2 448 1 2533 111 49 39 chr10 105416995 105417584 -40171704 - HERVH LTR ERV1 0 7713 5592 * 15505 88 13 13 chr10 105417561 105419737 -40169551 - HERVH LTR ERV1 -4726 2987 812 838 271 149 66 chr10 105419920 105420102 -40169186 - L3 LINE CR1 -428 1149 984 3117 104 11 0 chr10 105420102 105420543 -40168745 - L1PA13 LINE L1 0 6163 5718 838 271 149 66 chr10 105420543 105420778 -40168510 - L3 LINE CR1 -593 984 674 2311 160 5 15 chr10 105420778 105421172 -40168116 - MLT1B LTR MaLR 0 390 1 838 271 149 66 chr10 105421172 105421295 -40167993 - L3 LINE CR1 -903 674 563 225 178 0 0 chr10 105421764 105421809 -40167479 + (TA)n Simple_repeat Simple_repeat 2 46 0 222 193 0 105 chr10 105423490 105423547 -40165741 - L2 LINE L2 -1 3312 3262 211 314 121 0 chr10 105425334 105425458 -40163830 - MIR SINE MIR -70 192 54 2005 72 0 0 chr10 105426808 105427070 -40162218 + AluY SINE Alu 44 305 -6 221 244 0 0 chr10 105427118 105427159 -40162129 + L2 LINE L2 3255 3295 -18 319 370 74 0 chr10 105427183 105427399 -40161889 + L2 LINE L2 2251 2482 -832 367 181 0 174 chr10 105428221 105428294 -40160994 - L1MA8 LINE L1 -4 6287 6247 2273 116 3 3 chr10 105428294 105428604 -40160684 + AluSx SINE Alu 1 310 -2 367 181 0 174 chr10 105428604 105428668 -40160620 - L1MA8 LINE L1 -44 6247 6174 2454 67 0 38 chr10 105429060 105429376 -40159912 + AluY SINE Alu 1 304 -7 377 335 18 6 chr10 105429755 105429922 -40159366 - L3 LINE CR1 -198 1379 1211 1622 164 18 22 chr10 105430060 105430335 -40158953 - AluJo SINE Alu -38 274 1 301 279 0 36 chr10 105431147 105431258 -40158030 - L3 LINE CR1 -628 949 843 283 315 9 9 chr10 105431300 105431408 -40157880 - L3 LINE CR1 -733 844 737 2225 117 7 7 chr10 105432071 105432378 -40156910 + AluSc SINE Alu 1 307 -2 285 56 0 0 chr10 105432500 105432536 -40156752 + tRNA-Cys-TGC tRNA tRNA 2 37 -38 397 294 56 42 chr10 105432766 105432980 -40156308 - L3 LINE CR1 -223 1354 1138 * 408 202 36 107 chr10 105432972 105433140 -40156148 - L2 LINE L2 0 3313 3158 642 157 0 0 chr10 105433140 105433261 -40156027 + (TGGA)n Simple_repeat Simple_repeat 2 122 0 443 292 146 9 chr10 105433311 105433544 -40155744 - L3 LINE CR1 -507 1070 806 237 308 8 83 chr10 105434000 105434133 -40155155 + L2 LINE L2 3142 3264 -8 450 252 43 0 chr10 105434149 105434264 -40155024 + MIR3 SINE MIR 58 177 -31 243 88 0 0 chr10 105434266 105434300 -40154988 + (TCCCC)n Simple_repeat Simple_repeat 5 38 0 1596 156 18 18 chr10 105434321 105434596 -40154692 - AluJo SINE Alu -6 306 32 183 303 15 0 chr10 105436791 105436857 -40152431 - MIR SINE MIR -120 142 76 1772 149 21 35 chr10 105437231 105437520 -40151768 + AluJo SINE Alu 1 285 -27 393 257 23 16 chr10 105437711 105437862 -40151426 - L1MC4a LINE L1 -312 5809 5759 1793 139 64 0 chr10 105438151 105438272 -40151016 + AluSx SINE Alu 1 113 -206 669 20 60 10 chr10 105438272 105438372 -40150916 + (CTAAA)n Simple_repeat Simple_repeat 3 107 0 1793 139 64 0 chr10 105438372 105438552 -40150736 + AluSx SINE Alu 113 319 0 27 0 0 26 chr10 105438659 105438678 -40150610 + AT_rich Low_complexity Low_complexity 1 19 -18 2247 93 0 20 chr10 105438678 105438978 -40150310 + AluSp SINE Alu 1 294 -19 27 0 0 26 chr10 105438978 105438996 -40150292 + AT_rich Low_complexity Low_complexity 19 37 0 1109 197 115 17 chr10 105439042 105439337 -40149951 + MER33 DNA MER1_type 1 324 0 234 280 93 19 chr10 105439342 105439449 -40149839 + L2 LINE L2 3194 3308 -5 442 277 8 11 chr10 105439490 105439660 -40149628 + MIR SINE MIR 30 197 -65 472 240 20 33 chr10 105440825 105440975 -40148313 - MER5A DNA MER1_type -8 181 34 322 236 138 8 chr10 105441181 105441304 -40147984 + MIR SINE MIR 98 236 -26 2881 138 37 16 chr10 105441729 105442001 -40147287 + L1MA9 LINE L1 5788 6053 -259 2435 86 0 0 chr10 105442001 105442304 -40146984 + AluSc SINE Alu 1 303 -6 2881 138 37 16 chr10 105442304 105442398 -40146890 + L1MA9 LINE L1 6053 6144 -168 342 0 0 0 chr10 105442398 105442436 -40146852 + (CA)n Simple_repeat Simple_repeat 1 38 0 2881 138 37 16 chr10 105442436 105442581 -40146707 + L1MA9 LINE L1 6144 6311 -1 204 40 0 0 chr10 105442582 105442607 -40146681 + (TTAA)n Simple_repeat Simple_repeat 4 28 0 1885 172 0 3 chr10 105442663 105442965 -40146323 - AluJb SINE Alu -11 301 1 331 197 0 0 chr10 105443622 105443683 -40145605 - MIR3 SINE MIR -26 182 122 456 239 107 19 chr10 105444164 105444223 -40145065 + MER5A DNA MER1_type 17 69 -120 2399 105 0 3 chr10 105444223 105444536 -40144752 + AluSx SINE Alu 1 312 0 456 239 107 19 chr10 105444536 105444635 -40144653 + MER5A DNA MER1_type 69 189 0 437 309 138 0 chr10 105445099 105445287 -40144001 - L3 LINE CR1 -27 1550 1337 1890 171 10 10 chr10 105445363 105445667 -40143621 - AluJb SINE Alu -8 304 1 2647 55 0 0 chr10 105445672 105445981 -40143307 - AluY SINE Alu -2 309 1 471 299 92 5 chr10 105446351 105446535 -40142753 - MIR3 SINE MIR -8 200 1 2392 88 0 7 chr10 105447076 105447381 -40141907 - AluSg SINE Alu -7 303 1 2513 91 0 0 chr10 105448081 105448390 -40140898 + AluSx SINE Alu 1 309 -3 2029 139 3 7 chr10 105448637 105448939 -40140349 + AluSx SINE Alu 1 301 -11 258 298 40 53 chr10 105449911 105450002 -40139286 + L2 LINE L2 2826 2917 -355 2122 114 4 0 chr10 105450002 105450310 -40138978 - AluSx SINE Alu 0 309 1 258 298 40 53 chr10 105450310 105450368 -40138920 + L2 LINE L2 2917 2974 -298 233 56 0 28 chr10 105450392 105450428 -40138860 + (TAA)n Simple_repeat Simple_repeat 3 37 0 655 232 61 20 chr10 105450431 105450629 -40138659 - MIR SINE MIR -3 259 54 232 260 26 0 chr10 105450626 105450703 -40138585 + MIR SINE MIR 178 256 -6 * 490 281 12 41 chr10 105450868 105451039 -40138249 - MIR3 SINE MIR -23 185 20 2704 41 0 13 chr10 105451528 105451842 -40137446 - AluY SINE Alu -1 310 1 26 0 0 0 chr10 105452243 105452269 -40137019 + AT_rich Low_complexity Low_complexity 1 26 0 1371 139 9 23 chr10 105452870 105453004 -40136284 + AluJb SINE Alu 1 132 -180 2485 72 0 22 chr10 105453004 105453322 -40135966 + AluY SINE Alu 1 311 0 1371 139 9 23 chr10 105453322 105453403 -40135885 + AluJb SINE Alu 132 213 -99 2450 85 0 0 chr10 105453680 105453975 -40135313 + AluSq SINE Alu 1 295 -18 575 285 72 30 chr10 105454019 105454254 -40135034 - MIR SINE MIR -14 248 4 5528 144 45 39 chr10 105454309 105455386 -40133902 + L1MC3 LINE L1 6702 7784 -1 2328 73 35 0 chr10 105455396 105455684 -40133604 + AluY SINE Alu 1 298 -13 238 302 91 59 chr10 105455703 105456030 -40133258 + L1ME LINE L1 5320 5668 -453 2283 101 0 0 chr10 105456030 105456317 -40132971 - AluSx SINE Alu -24 288 2 238 302 91 59 chr10 105456317 105456463 -40132825 + L1ME LINE L1 5668 5808 -313 1193 127 0 0 chr10 105456464 105456622 -40132666 - AluSg/x SINE Alu -18 294 137 2241 125 0 0 chr10 105457359 105457662 -40131626 - AluSx SINE Alu -9 303 1 261 191 133 29 chr10 105457662 105457767 -40131521 + L1ME LINE L1 5768 5883 -238 676 267 32 16 chr10 105457783 105457970 -40131318 + MLT1J LTR MaLR 1 190 -321 189 0 0 0 chr10 105457995 105458016 -40131272 + (TGG)n Simple_repeat Simple_repeat 3 23 0 5993 72 10 12 chr10 105458019 105458824 -40130464 - L1PA8 LINE L1 -1 6171 5369 575 298 75 48 chr10 105458832 105459124 -40130164 + MLT1J LTR MaLR 205 504 -7 2484 84 0 3 chr10 105459163 105459472 -40129816 + AluY SINE Alu 1 308 -3 942 216 22 0 chr10 105459867 105460052 -40129236 + MER5A DNA MER1_type 1 189 0 262 20 0 143 chr10 105460371 105460420 -40128868 + L1MA7 LINE L1 6229 6270 -21 1230 110 72 72 chr10 105460424 105460660 -40128628 - AluSg/x SINE Alu 0 312 77 2144 125 7 10 chr10 105460903 105461311 -40127977 + AluSx SINE Alu 1 407 0 22 0 0 0 chr10 105461378 105461400 -40127888 + AT_rich Low_complexity Low_complexity 1 22 0 1246 231 72 36 chr10 105461636 105462135 -40127153 + MER20B DNA MER1_type 267 783 0 2030 121 4 7 chr10 105462140 105462420 -40126868 + AluSx SINE Alu 1 279 -33 195 129 0 0 chr10 105462420 105462451 -40126837 + (GGAGA)n Simple_repeat Simple_repeat 2 32 0 2843 164 5 63 chr10 105463245 105463463 -40125825 + L1MB8 LINE L1 5611 5840 -338 793 164 0 0 chr10 105463463 105463579 -40125709 + FLAM_C SINE Alu 3 118 -15 2843 164 5 63 chr10 105463579 105463963 -40125325 + L1MB8 LINE L1 5840 6178 0 243 88 0 0 chr10 105464200 105464234 -40125054 + (A)n Simple_repeat Simple_repeat 1 34 0 364 282 47 38 chr10 105464248 105464461 -40124827 + L1 LINE L1 4805 5019 -1127 1613 196 0 3 chr10 105464651 105464936 -40124352 + AluJo SINE Alu 7 290 -22 1999 131 7 33 chr10 105465387 105465692 -40123596 + AluJb SINE Alu 1 297 -15 2439 78 3 0 chr10 105466090 105466383 -40122905 - AluSp SINE Alu -17 296 3 25 0 0 0 chr10 105466389 105466414 -40122874 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr10 105466469 105466490 -40122798 + AT_rich Low_complexity Low_complexity 1 21 0 1806 142 0 4 chr10 105466670 105466937 -40122351 - AluSx SINE Alu -46 266 1 930 215 64 13 chr10 105466938 105467236 -40122052 + L1MEc LINE L1 1963 2275 -4121 1101 190 219 8 chr10 105467294 105467541 -40121747 - AluJb SINE Alu -3 299 1 260 271 0 0 chr10 105467543 105467602 -40121686 + MER58 DNA MER1_type 40 98 -2322 345 183 0 0 chr10 105467605 105467676 -40121612 + MER58 DNA MER1_type 2314 2384 -36 2299 182 24 58 chr10 105467851 105468035 -40121253 - L1M4 LINE L1 -431 5753 5564 1662 169 0 44 chr10 105468035 105468359 -40120929 - AluJb SINE Alu 0 311 1 2299 182 24 58 chr10 105468359 105468628 -40120660 - L1M4 LINE L1 -620 5564 5317 2484 60 3 3 chr10 105468628 105468926 -40120362 + AluY SINE Alu 1 298 -13 2299 182 24 58 chr10 105468926 105469198 -40120090 - L1M4 LINE L1 -867 5317 5037 547 79 0 0 chr10 105469198 105469274 -40120014 - L1PA15 LINE L1 -5 6160 6085 888 141 0 0 chr10 105469278 105469399 -40119889 - AluJb SINE Alu -21 291 171 461 204 62 18 chr10 105469468 105469581 -40119707 - L1M4 LINE L1 -1497 4649 4532 818 179 0 0 chr10 105469692 105469815 -40119473 - FLAM_C SINE Alu -18 125 3 1982 125 17 3 chr10 105469830 105470125 -40119163 - AluSc SINE Alu -4 305 7 305 288 97 59 chr10 105471080 105471368 -40117920 + LTR16C LTR ERVL 193 491 0 1925 152 7 3 chr10 105471719 105472008 -40117280 - AluJo SINE Alu -20 292 3 2011 133 0 11 chr10 105472065 105472391 -40116897 + AluSx SINE Alu 1 323 0 907 164 7 161 chr10 105472623 105472827 -40116461 + L1MD3 LINE L1 7730 7875 -120 2185 87 25 11 chr10 105472827 105473113 -40116175 + AluSx SINE Alu 1 290 -22 907 164 7 161 chr10 105473113 105473207 -40116081 + L1MD3 LINE L1 7875 7982 -13 509 152 0 22 chr10 105473209 105473301 -40115987 - AluSg/x SINE Alu -5 304 215 1282 110 12 0 chr10 105473705 105473878 -40115410 - AluSq SINE Alu -138 175 1 189 150 0 25 chr10 105474151 105474191 -40115097 - MIR SINE MIR -61 147 109 680 182 0 7 chr10 105474409 105474552 -40114736 + CT-rich Low_complexity Low_complexity 3 144 0 2382 104 0 0 chr10 105474556 105474864 -40114424 - AluSq SINE Alu -5 308 1 227 243 0 14 chr10 105474866 105474940 -40114348 + T-rich Low_complexity Low_complexity 2 74 0 821 138 0 43 chr10 105474944 105474963 -40114325 - FLAM_C SINE Alu -170 132 114 216 0 0 0 chr10 105474963 105474987 -40114301 + (TTTAA)n Simple_repeat Simple_repeat 2 25 0 821 138 0 43 chr10 105474987 105475105 -40114183 - FLAM_C SINE Alu -188 114 1 1891 122 43 0 chr10 105475196 105475474 -40113814 - AluSg SINE Alu -20 290 1 200 94 0 31 chr10 105476469 105476501 -40112787 + (TTTC)n Simple_repeat Simple_repeat 4 34 0 752 160 0 33 chr10 105476502 105476683 -40112605 + CT-rich Low_complexity Low_complexity 4 178 0 276 100 0 0 chr10 105476676 105476716 -40112572 + (CCCCCT)n Simple_repeat Simple_repeat 6 45 0 * 1578 175 22 51 chr10 105476716 105477030 -40112258 - AluJo SINE Alu -7 305 1 2206 114 0 7 chr10 105477594 105477891 -40111397 + AluSg1 SINE Alu 1 295 -14 1704 164 29 0 chr10 105477914 105478188 -40111100 + AluJb SINE Alu 1 282 -30 331 313 74 45 chr10 105478473 105478716 -40110572 + L1M4 LINE L1 4085 4334 -1812 306 73 0 0 chr10 105478881 105478922 -40110366 + (TA)n Simple_repeat Simple_repeat 1 41 0 2073 126 10 7 chr10 105478922 105479216 -40110072 - AluSx SINE Alu -17 295 1 458 296 46 20 chr10 105480009 105480205 -40109083 - MIR SINE MIR -17 245 45 2259 125 3 0 chr10 105480217 105480528 -40108760 - AluSx SINE Alu 0 312 1 372 131 0 11 chr10 105480550 105480627 -40108661 + AluS SINE Alu 13 59 -249 2430 4 90 4 chr10 105480771 105481048 -40108240 - AluYb8 SINE Alu -17 301 1 1040 66 0 22 chr10 105481100 105481236 -40108052 - AluSg/x SINE Alu -8 302 170 996 112 8 0 chr10 105481236 105481370 -40107918 - MLT2A2 LTR ERVL -269 184 50 2366 101 0 7 chr10 105481371 105481679 -40107609 - AluSg SINE Alu -4 306 1 1951 138 10 0 chr10 105481679 105481977 -40107311 - AluSx SINE Alu -11 301 1 1618 179 13 36 chr10 105482100 105482237 -40107051 + AluJb SINE Alu 1 140 -172 2106 113 3 0 chr10 105482237 105482551 -40106737 + AluSq SINE Alu 1 315 0 1618 179 13 36 chr10 105482551 105482720 -40106568 + AluJb SINE Alu 140 301 -11 2334 41 51 20 chr10 105482948 105483243 -40106045 + AluY SINE Alu 1 304 -7 569 78 11 11 chr10 105483306 105483396 -40105892 - MER41B LTR ERV1 -32 603 514 525 186 0 0 chr10 105483921 105484007 -40105281 - AluJ/FLAM SINE Alu -225 87 2 231 137 0 55 chr10 105484097 105484170 -40105118 + (TA)n Simple_repeat Simple_repeat 1 69 0 485 81 0 0 chr10 105484170 105484232 -40105056 - Alu SINE Alu -247 63 2 24 0 0 0 chr10 105484236 105484260 -40105028 + AT_rich Low_complexity Low_complexity 1 24 0 1193 140 5 31 chr10 105484339 105484532 -40104756 + AluSx SINE Alu 2 189 -123 285 149 43 0 chr10 105484714 105484761 -40104527 + AluSx SINE Alu 2 50 -251 564 249 40 43 chr10 105484780 105485033 -40104255 + L1ME4a LINE L1 5610 5861 -260 283 242 42 42 chr10 105485038 105485079 -40104209 + AluY SINE Alu 1 41 -260 2706 59 6 0 chr10 105485079 105485416 -40103872 - LTR14A LTR ERVK 0 344 6 2084 93 7 4 chr10 105485416 105485685 -40103603 + AluSx SINE Alu 29 298 -14 1731 126 0 28 chr10 105485970 105486224 -40103064 + AluSx SINE Alu 35 281 -31 207 0 0 0 chr10 105486227 105486250 -40103038 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 665 327 27 11 chr10 105486337 105486597 -40102691 + L3 LINE CR1 1312 1575 -2 2199 128 0 0 chr10 105486635 105486933 -40102355 + AluSx SINE Alu 1 298 -14 612 141 0 0 chr10 105486961 105487053 -40102235 + AluSg/x SINE Alu 209 300 -12 27 0 0 0 chr10 105487474 105487501 -40101787 + AT_rich Low_complexity Low_complexity 1 27 0 732 171 19 63 chr10 105487953 105488029 -40101259 - MLT1A1 LTR MaLR -213 152 85 2213 194 26 75 chr10 105488029 105488612 -40100676 + MLT2B3 LTR ERVL 1 554 0 732 171 19 63 chr10 105488612 105488693 -40100595 - MLT1A1 LTR MaLR -280 85 2 24 0 0 0 chr10 105488701 105488725 -40100563 + AT_rich Low_complexity Low_complexity 1 24 0 816 174 0 7 chr10 105488725 105488863 -40100425 - AluJo SINE Alu -175 137 1 773 169 0 0 chr10 105489045 105489163 -40100125 - FLAM_C SINE Alu -15 118 1 351 280 0 10 chr10 105489252 105489352 -40099936 - L1MC/D LINE L1 -2116 5692 5594 2227 101 20 3 chr10 105489371 105489668 -40099620 + AluSx SINE Alu 1 302 -10 575 153 17 17 chr10 105489791 105489909 -40099379 - MIR SINE MIR -56 206 89 249 57 0 0 chr10 105490235 105490270 -40099018 + (TTAA)n Simple_repeat Simple_repeat 4 38 0 1919 139 4 0 chr10 105490271 105490551 -40098737 - AluSx SINE Alu -31 281 1 1728 156 35 7 chr10 105490554 105490837 -40098451 - AluJo SINE Alu -20 292 2 262 220 34 0 chr10 105491063 105491122 -40098166 + L1MC4 LINE L1 7452 7512 -530 2375 83 0 17 chr10 105491124 105491425 -40097863 + AluSp SINE Alu 1 296 -17 1788 118 0 33 chr10 105491523 105491793 -40097495 + AluSx SINE Alu 1 261 -51 419 203 138 0 chr10 105491836 105491959 -40097329 + L1MC4 LINE L1 7901 8040 -2 1407 167 24 95 chr10 105491990 105492156 -40097132 + L1MB8 LINE L1 5662 5838 -340 2101 141 3 0 chr10 105492156 105492455 -40096833 + AluSx SINE Alu 1 300 -12 1407 167 24 95 chr10 105492455 105492580 -40096708 + L1MB8 LINE L1 5838 5970 -208 1710 142 10 58 chr10 105492580 105492889 -40096399 + AluJb SINE Alu 1 294 -18 1407 167 24 95 chr10 105492889 105492960 -40096328 + L1MB8 LINE L1 5970 6045 -133 2700 48 0 0 chr10 105492960 105493271 -40096017 + AluY SINE Alu 1 311 0 1407 167 24 95 chr10 105493271 105493431 -40095857 + L1MB8 LINE L1 6045 6125 -53 1240 131 0 0 chr10 105493525 105493752 -40095536 + AluSg/x SINE Alu 137 363 0 395 115 0 0 chr10 105495459 105495520 -40093768 + L1MB8 LINE L1 6110 6170 -8 1946 140 10 10 chr10 105495629 105495921 -40093367 - AluSx SINE Alu -20 292 1 355 123 123 0 chr10 105496103 105496168 -40093120 - MIR SINE MIR -155 107 35 * 434 241 193 6 chr10 105496147 105496313 -40092975 + MIR SINE MIR 28 224 -38 556 269 93 0 chr10 105496705 105496921 -40092367 - MIR SINE MIR -24 238 3 202 325 100 0 chr10 105496988 105497068 -40092220 + L2 LINE L2 3168 3255 -17 245 29 29 0 chr10 105497152 105497186 -40092102 + (TTTA)n Simple_repeat Simple_repeat 4 38 0 2203 96 0 3 chr10 105497188 105497470 -40091818 - AluSx SINE Alu -31 281 1 262 311 193 6 chr10 105497528 105497689 -40091599 + MIR SINE MIR 72 262 0 258 316 77 54 chr10 105497784 105497952 -40091336 + MIR3 SINE MIR 5 176 -32 264 247 25 12 chr10 105498781 105498862 -40090426 + CT-rich Low_complexity Low_complexity 3 84 0 21 0 0 0 chr10 105499095 105499116 -40090172 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 105499448 105499469 -40089819 + AT_rich Low_complexity Low_complexity 1 21 0 48 109 0 0 chr10 105499895 105500097 -40089191 + GC_rich Low_complexity Low_complexity 1 202 0 26 30 0 0 chr10 105500216 105500249 -40089039 + GC_rich Low_complexity Low_complexity 1 33 0 287 265 0 20 chr10 105500458 105500556 -40088732 + C-rich Low_complexity Low_complexity 1 96 0 21 0 0 0 chr10 105500683 105500704 -40088584 + GC_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr10 105501127 105501158 -40088130 + GC_rich Low_complexity Low_complexity 1 31 0 2342 89 0 10 chr10 105502690 105503003 -40086285 - AluSg SINE Alu 0 310 1 453 109 174 43 chr10 105504080 105504172 -40085116 - FLAM_C SINE Alu -4 139 36 2457 64 3 0 chr10 105504792 105505087 -40084201 - AluY SINE Alu -11 300 5 1868 101 8 8 chr10 105505099 105505356 -40083932 - AluSc SINE Alu -52 257 1 246 304 0 0 chr10 105505469 105505548 -40083740 - MARNA DNA Mariner -201 385 307 4020 157 50 81 chr10 105505992 105506091 -40083197 - L1MB7 LINE L1 -21 6163 6062 819 156 0 0 chr10 105506091 105506219 -40083069 - FLAM_C SINE Alu -1 132 5 4020 157 50 81 chr10 105506219 105507094 -40082194 - L1MB7 LINE L1 -122 6062 5215 298 139 0 0 chr10 105507223 105507266 -40082022 + Alu SINE Alu 2 44 -257 1826 152 17 7 chr10 105507482 105507779 -40081509 - AluSg SINE Alu -8 302 3 21 57 0 0 chr10 105508404 105508439 -40080849 + AT_rich Low_complexity Low_complexity 1 35 0 235 147 0 0 chr10 105508449 105508483 -40080805 - Alu SINE Alu -274 34 1 1846 161 0 20 chr10 105508659 105508958 -40080330 + AluJb SINE Alu 4 296 -16 2343 97 7 0 chr10 105509163 105509461 -40079827 - AluSx SINE Alu -12 300 1 215 31 31 0 chr10 105509550 105509582 -40079706 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 834 144 0 0 chr10 105509582 105509700 -40079588 - FLAM_C SINE Alu -25 118 1 180 0 0 0 chr10 105510027 105510047 -40079241 + (TA)n Simple_repeat Simple_repeat 2 21 0 383 232 56 40 chr10 105510082 105510207 -40079081 + MLT1I LTR MaLR 16 142 -267 341 157 0 72 chr10 105510193 105510276 -40079012 + AluJ/FRAM SINE Alu 225 301 -1 * 322 277 181 36 chr10 105510336 105510502 -40078786 + MLT1I LTR MaLR 197 386 -23 1936 215 68 45 chr10 105510535 105510650 -40078638 - L1ME3A LINE L1 -163 6007 5896 1679 175 32 7 chr10 105510650 105510935 -40078353 - AluJo SINE Alu -20 292 1 1936 215 68 45 chr10 105510935 105511478 -40077810 - L1ME3A LINE L1 -274 5896 5293 1422 144 20 61 chr10 105511481 105511565 -40077723 - Tigger7 DNA MER2_type 0 2587 2501 1414 133 43 30 chr10 105511565 105511798 -40077490 - MER46A DNA MER2_type 0 236 1 1422 144 20 61 chr10 105511798 105512029 -40077259 - Tigger7 DNA MER2_type -86 2501 9 1353 153 17 21 chr10 105512038 105512279 -40077009 + Tigger7 DNA MER2_type 2346 2585 -2 372 229 76 52 chr10 105512318 105512528 -40076760 - L1ME3A LINE L1 -872 5274 5060 2264 104 3 0 chr10 105512529 105512828 -40076460 - AluSx SINE Alu -12 300 1 936 147 0 0 chr10 105512828 105512964 -40076324 - AluSq/x SINE Alu -177 136 1 340 236 69 35 chr10 105512974 105513148 -40076140 - L1ME3A LINE L1 -1645 4501 4322 * 1088 142 119 5 chr10 105513145 105513363 -40075925 - L1MD3 LINE L1 0 7995 7753 1381 177 83 8 chr10 105513363 105513629 -40075659 + AluJo SINE Alu 19 304 -8 1651 184 28 9 chr10 105513632 105513959 -40075329 - L1MD3 LINE L1 -253 7742 7410 247 204 19 0 chr10 105513959 105514013 -40075275 - MLT1F1 LTR MaLR -442 125 71 324 189 27 0 chr10 105514147 105514221 -40075067 - L1ME2 LINE L1 -229 5935 5860 2152 123 0 3 chr10 105514244 105514546 -40074742 - AluSg SINE Alu -9 301 1 1400 206 84 32 chr10 105514676 105514933 -40074355 - L1ME3A LINE L1 -3212 2934 2647 2281 109 0 3 chr10 105514933 105515236 -40074052 + AluSx SINE Alu 1 302 -10 1400 206 84 32 chr10 105515236 105515381 -40073907 - L1ME3A LINE L1 -3499 2647 2511 34 42 0 0 chr10 105516331 105516379 -40072909 + AT_rich Low_complexity Low_complexity 1 48 0 207 0 0 0 chr10 105516409 105516432 -40072856 + (A)n Simple_repeat Simple_repeat 1 23 0 643 258 89 87 chr10 105516605 105517293 -40071995 + L1MEd LINE L1 561 1246 -4963 1851 147 47 10 chr10 105517293 105517592 -40071696 + AluJb SINE Alu 3 312 0 643 258 89 87 chr10 105517592 105517669 -40071619 + L1MEd LINE L1 1246 1321 -4888 2308 56 42 7 chr10 105517669 105517955 -40071333 - AluY SINE Alu -15 296 1 643 258 89 87 chr10 105517955 105518275 -40071013 + L1MEd LINE L1 1321 1671 -4538 1454 170 75 103 chr10 105518312 105518766 -40070522 - LTR8A LTR ERV1 0 727 287 1046 103 0 27 chr10 105518839 105519024 -40070264 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 509 251 30 14 chr10 105519029 105519206 -40070082 - LTR8 LTR ERV1 -434 257 115 27 0 0 0 chr10 105519284 105519311 -40069977 + AT_rich Low_complexity Low_complexity 1 27 0 786 329 40 15 chr10 105519352 105519750 -40069538 + L1MEc LINE L1 49 456 -5940 514 92 118 0 chr10 105519924 105520000 -40069288 + AluS SINE Alu 2 86 -226 659 174 6 0 chr10 105520013 105520191 -40069097 + CT-rich Low_complexity Low_complexity 2 180 0 483 240 0 0 chr10 105520258 105520383 -40068905 + (TA)n Simple_repeat Simple_repeat 1 125 0 244 235 0 118 chr10 105520388 105520490 -40068798 - L1MC4 LINE L1 -1339 6703 6614 263 181 28 28 chr10 105520536 105520608 -40068680 - L1MC3 LINE L1 -1143 6642 6571 249 265 72 0 chr10 105520632 105520715 -40068573 - L1MC4 LINE L1 -1339 6703 6615 432 117 17 0 chr10 105520726 105520786 -40068502 + AluSp SINE Alu 125 185 -118 1834 94 4 0 chr10 105520786 105521021 -40068267 - AluY SINE Alu -75 236 1 2952 77 0 3 chr10 105521021 105521397 -40067891 - MER4B LTR ERV1 -235 375 1 1993 124 9 73 chr10 105521422 105521752 -40067536 - AluSx SINE Alu -3 309 1 279 0 0 0 chr10 105521755 105521786 -40067502 + (TTTTA)n Simple_repeat Simple_repeat 2 32 0 2032 111 3 39 chr10 105521790 105522097 -40067191 - AluSp SINE Alu -17 296 1 2477 80 0 13 chr10 105522103 105522414 -40066874 - AluY SINE Alu -4 307 1 1207 202 150 8 chr10 105522416 105522669 -40066619 - AluJo SINE Alu -12 290 2 2545 59 0 3 chr10 105523268 105523571 -40065717 + AluY SINE Alu 1 302 -9 530 260 57 11 chr10 105523972 105524149 -40065139 - MER113 DNA MER1_type? -328 193 9 287 313 31 16 chr10 105524160 105524288 -40065000 + MER103 DNA DNA 36 165 -1 2042 130 0 11 chr10 105524297 105524623 -40064665 + AluSx SINE Alu 1 323 0 782 246 110 61 chr10 105524842 105525298 -40063990 - HAL1b LINE L1 -172 1176 699 414 0 0 0 chr10 105525336 105525382 -40063906 + (TG)n Simple_repeat Simple_repeat 2 47 0 1467 109 0 5 chr10 105525382 105525583 -40063705 - AluSg/x SINE Alu -27 283 84 2222 116 7 0 chr10 105526406 105526700 -40062588 - AluSq SINE Alu -17 296 1 2246 84 39 0 chr10 105526867 105527152 -40062136 + AluY SINE Alu 1 296 -15 1905 161 0 13 chr10 105527344 105527649 -40061639 + AluJb SINE Alu 1 301 -11 1213 158 224 41 chr10 105527838 105528200 -40061088 - MSTC LTR MaLR 0 428 1 302 244 47 72 chr10 105528348 105528456 -40060832 + L1MC5 LINE L1 5269 5371 -2437 2314 79 3 20 chr10 105528456 105528759 -40060529 - AluSq SINE Alu -15 298 1 302 244 47 72 chr10 105528759 105528843 -40060445 + L1MC5 LINE L1 5371 5456 -2352 544 193 77 136 chr10 105528866 105529006 -40060282 + L1MC5 LINE L1 6852 6999 -962 1919 164 3 3 chr10 105529006 105529310 -40059978 + AluJb SINE Alu 1 304 -8 544 193 77 136 chr10 105529310 105529381 -40059907 + L1MC5 LINE L1 6999 7073 -888 2431 82 0 0 chr10 105529381 105529675 -40059613 - AluY SINE Alu -17 294 1 544 193 77 136 chr10 105529675 105529866 -40059422 + L1MC5 LINE L1 7073 7231 -730 1359 239 53 65 chr10 105529876 105530369 -40058919 - L2 LINE L2 -480 2834 2348 205 138 0 0 chr10 105530546 105530575 -40058713 + (TCCCC)n Simple_repeat Simple_repeat 4 32 0 1748 146 11 14 chr10 105530579 105530860 -40058428 - AluJb SINE Alu -32 280 1 565 291 92 35 chr10 105530893 105531120 -40058168 - MIR SINE MIR -21 241 2 1977 128 3 19 chr10 105531414 105531727 -40057561 - AluSx SINE Alu -4 308 1 225 0 0 0 chr10 105532157 105532182 -40057106 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 1899 152 0 0 chr10 105532186 105532462 -40056826 - AluSx SINE Alu -36 276 1 647 178 123 0 chr10 105532642 105532788 -40056500 - MER105 DNA DNA -29 175 12 447 189 0 14 chr10 105532856 105532930 -40056358 + MER58 DNA MER1_type 2345 2417 -3 362 240 227 19 chr10 105532932 105533086 -40056202 + MIR SINE MIR 33 218 -44 2352 105 0 0 chr10 105533208 105533521 -40055767 - AluSq SINE Alu 0 313 1 1397 172 93 15 chr10 105533787 105534177 -40055111 - Charlie1 DNA MER1_type -1 2760 2269 5360 155 75 21 chr10 105534182 105534797 -40054491 - L1MC1 LINE L1 0 6333 5753 2093 124 17 0 chr10 105534797 105535096 -40054192 - AluSx SINE Alu -8 304 1 5360 155 75 21 chr10 105535096 105535588 -40053700 - L1MC1 LINE L1 -580 5753 5172 515 98 85 0 chr10 105535599 105535681 -40053607 - L1MA8 LINE L1 -6 6285 6197 743 163 75 27 chr10 105535858 105536005 -40053283 + Charlie1 DNA MER1_type 52 205 -2556 622 216 0 0 chr10 105536011 105536136 -40053152 + Charlie1 DNA MER1_type 2632 2756 -5 807 229 16 27 chr10 105536312 105536495 -40052793 - MER5A DNA MER1_type 0 189 9 248 267 209 53 chr10 105536500 105536706 -40052582 - L1MEd LINE L1 -5772 347 110 1712 153 6 49 chr10 105537134 105537460 -40051828 - AluJb SINE Alu 0 312 1 1899 120 66 0 chr10 105537668 105537942 -40051346 - AluSx SINE Alu -20 292 1 1173 134 159 0 chr10 105538039 105538240 -40051048 - MER46A DNA MER2_type 0 236 4 1115 246 49 7 chr10 105538766 105539050 -40050238 + Charlie1a DNA MER1_type 13 308 -1147 2625 30 14 0 chr10 105539050 105539346 -40049942 + AluYa5 SINE Alu 1 300 -11 1361 87 6 6 chr10 105539347 105539530 -40049758 + L1PB1 LINE L1 5968 6150 -1 2207 104 0 19 chr10 105539537 105539845 -40049443 + AluSx SINE Alu 1 302 -10 2446 80 3 13 chr10 105539850 105540164 -40049124 + AluSp SINE Alu 1 311 -2 400 189 110 47 chr10 105540189 105540316 -40048972 + L1M LINE L1 5290 5427 -742 24 53 0 0 chr10 105540316 105540354 -40048934 + AT_rich Low_complexity Low_complexity 1 38 0 1049 255 3 17 chr10 105540444 105540738 -40048550 + L1M4 LINE L1 3821 4110 -2036 2156 108 0 3 chr10 105540755 105541043 -40048245 - AluSx SINE Alu -24 288 2 25 31 0 0 chr10 105541085 105541117 -40048171 + AT_rich Low_complexity Low_complexity 1 32 0 2215 89 10 7 chr10 105541372 105541663 -40047625 + AluSq SINE Alu 1 292 -21 2297 112 3 0 chr10 105541884 105542188 -40047100 + AluSc SINE Alu 1 305 -4 814 179 0 0 chr10 105542203 105542326 -40046962 + FLAM_C SINE Alu 3 125 -18 463 204 62 18 chr10 105542437 105542550 -40046738 + L1M4 LINE L1 4532 4649 -1497 878 141 0 0 chr10 105542619 105542740 -40046548 + AluJb SINE Alu 171 291 -21 573 79 0 0 chr10 105542744 105542820 -40046468 + L1PA15 LINE L1 6085 6160 -5 1148 209 41 4 chr10 105542820 105543088 -40046200 + L1M4 LINE L1 5037 5314 -832 1684 77 5 0 chr10 105543095 105543304 -40045984 - AluY SINE Alu -18 293 84 231 91 0 0 chr10 105543684 105543717 -40045571 - MLT1A1 LTR MaLR -5 585 553 2114 128 0 13 chr10 105544168 105544473 -40044815 + AluSq SINE Alu 1 301 -12 2377 74 0 0 chr10 105544475 105544780 -40044508 + AluY SINE Alu 1 305 0 563 193 22 67 chr10 105544938 105545073 -40044215 - MER5A DNA MER1_type 0 189 61 31 26 0 0 chr10 105545097 105545135 -40044153 + AT_rich Low_complexity Low_complexity 1 38 0 322 197 70 0 chr10 105545152 105545223 -40044065 - MER5A DNA MER1_type -113 76 1 444 296 57 6 chr10 105545665 105545824 -40043464 - MIR SINE MIR -50 212 46 2000 126 16 13 chr10 105546038 105546347 -40042941 + AluSx SINE Alu 1 310 -2 2070 144 3 0 chr10 105546396 105546701 -40042587 + AluSx SINE Alu 1 306 -6 2202 203 16 129 chr10 105546710 105546881 -40042407 - L1ME1 LINE L1 -69 6097 5908 1720 192 7 0 chr10 105546881 105547173 -40042115 - AluJb SINE Alu -18 294 1 2202 203 16 129 chr10 105547173 105547291 -40041997 - L1ME1 LINE L1 -258 5908 5778 2052 152 0 0 chr10 105547291 105547594 -40041694 - AluSx SINE Alu -9 303 1 2202 203 16 129 chr10 105547594 105548077 -40041211 - L1PB1 LINE L1 -388 5778 5412 1393 89 0 0 chr10 105548079 105548259 -40041029 + L1PB1 LINE L1 5794 5973 -178 2309 77 3 3 chr10 105548259 105548546 -40040742 + AluSx SINE Alu 1 287 -25 2051 139 3 7 chr10 105549490 105549793 -40039495 + AluSx SINE Alu 2 303 -9 28 0 0 0 chr10 105549885 105549913 -40039375 + AT_rich Low_complexity Low_complexity 1 28 0 978 193 165 68 chr10 105550049 105550371 -40038917 - MLT1A1 LTR MaLR -12 353 1 954 204 96 36 chr10 105550471 105550805 -40038483 + L1ME1 LINE L1 4465 4818 -1328 14625 131 21 31 chr10 105550808 105553228 -40036060 + Tigger1 DNA MER2_type 22 2418 0 2978 222 102 9 chr10 105553234 105554464 -40034824 + L1ME1 LINE L1 4822 6158 -8 3877 195 82 73 chr10 105554871 105555405 -40033883 + L1MC4 LINE L1 6248 6776 -1266 198 0 0 0 chr10 105555405 105555427 -40033861 + (TAAAA)n Simple_repeat Simple_repeat 2 23 0 3877 195 82 73 chr10 105555427 105555647 -40033641 + L1MC4 LINE L1 6776 6993 -1049 2060 110 14 0 chr10 105555647 105555985 -40033303 + AluSx SINE Alu 1 342 0 3877 195 82 73 chr10 105555985 105556477 -40032811 + L1MC4 LINE L1 6993 8042 0 1875 156 7 0 chr10 105556479 105556605 -40032683 + AluJb SINE Alu 1 125 -187 320 0 25 0 chr10 105556605 105556645 -40032643 + (CAAA)n Simple_repeat Simple_repeat 4 44 0 1875 156 7 0 chr10 105556645 105556807 -40032481 + AluJb SINE Alu 125 291 -21 404 243 20 2 chr10 105557054 105557213 -40032075 - MER58 DNA MER1_type -16 2404 1 195 274 25 123 chr10 105558579 105558783 -40030505 + L2 LINE L2 3120 3303 -10 28 29 0 0 chr10 105558811 105558846 -40030442 + AT_rich Low_complexity Low_complexity 1 35 0 2525 214 52 58 chr10 105558850 105559257 -40030031 + L1 LINE L1 4533 4936 -1210 1908 158 0 7 chr10 105559257 105559554 -40029734 + AluSx SINE Alu 1 295 -17 2525 214 52 58 chr10 105559554 105559890 -40029398 + L1 LINE L1 4936 5272 -874 1361 173 1 0 chr10 105559891 105560205 -40029083 + AluJb SINE Alu 2 282 -30 333 0 0 0 chr10 105560229 105560266 -40029022 + (TG)n Simple_repeat Simple_repeat 1 37 0 186 143 0 0 chr10 105560377 105560412 -40028876 + (TCTCCC)n Simple_repeat Simple_repeat 6 40 0 2326 90 3 0 chr10 105560691 105560990 -40028298 - AluSp SINE Alu -13 300 1 2297 97 0 3 chr10 105561070 105561369 -40027919 - AluSg SINE Alu -1 309 12 405 310 70 8 chr10 105561572 105561701 -40027587 + L2 LINE L2 3136 3272 0 2007 146 7 3 chr10 105561711 105562013 -40027275 - AluSx SINE Alu -9 303 1 1811 170 0 26 chr10 105562015 105562321 -40026967 - AluSx SINE Alu -14 298 1 2253 120 0 0 chr10 105562369 105562677 -40026611 - AluSx SINE Alu 0 312 5 191 300 133 0 chr10 105562777 105562837 -40026451 - MIR SINE MIR -180 82 15 1622 78 169 0 chr10 105562849 105563117 -40026171 - AluSg1 SINE Alu 0 309 1 1554 176 21 18 chr10 105563881 105564160 -40025128 - AluJo SINE Alu -30 282 3 1640 162 3 45 chr10 105564223 105564532 -40024756 - AluJb SINE Alu -16 296 1 689 231 109 56 chr10 105564987 105565073 -40024215 - L1ME2 LINE L1 -32 6132 6052 2511 87 3 0 chr10 105565073 105565385 -40023903 + AluSq SINE Alu 1 313 0 689 231 109 56 chr10 105565385 105565601 -40023687 - L1ME2 LINE L1 -112 6052 5814 * 735 142 206 64 chr10 105565596 105565815 -40023473 - L1MB8 LINE L1 0 6178 5929 * 1653 166 27 62 chr10 105565811 105566069 -40023219 - L1ME2 LINE L1 -332 5832 5589 2098 104 21 3 chr10 105566069 105566356 -40022932 - AluSq SINE Alu -21 292 1 1653 166 27 62 chr10 105566356 105566471 -40022817 - L1ME2 LINE L1 -575 5589 5472 1944 116 7 20 chr10 105566478 105566771 -40022517 - AluSp SINE Alu -22 291 3 1661 209 0 0 chr10 105566795 105567082 -40022206 + AluJo SINE Alu 1 287 -25 714 150 42 67 chr10 105567093 105567213 -40022075 + FLAM_C SINE Alu 2 118 -15 229 241 13 13 chr10 105567285 105567364 -40021924 - L1ME2 LINE L1 -1492 4654 4576 3646 194 56 39 chr10 105567467 105567510 -40021778 - MER21B LTR ERV1 -98 765 724 1616 176 40 10 chr10 105567510 105567811 -40021477 - AluSg SINE Alu 0 310 1 3646 194 56 39 chr10 105567811 105568247 -40021041 - MER21B LTR ERV1 -139 724 266 1769 174 27 0 chr10 105568247 105568545 -40020743 - AluJb SINE Alu -6 306 1 3646 194 56 39 chr10 105568545 105568816 -40020472 - MER21B LTR ERV1 -597 266 1 2329 112 0 6 chr10 105568849 105569162 -40020126 - AluSq SINE Alu -2 311 1 2324 113 0 0 chr10 105569173 105569483 -40019805 - AluSx SINE Alu -2 310 1 352 341 62 23 chr10 105570404 105570533 -40018755 - L2 LINE L2 -1 3271 3138 2087 154 62 0 chr10 105570602 105570927 -40018361 + MER7A DNA MER2_type 3 345 -1 22 0 0 0 chr10 105571157 105571179 -40018109 + AT_rich Low_complexity Low_complexity 1 22 0 1649 189 14 7 chr10 105571463 105571759 -40017529 + AluJo SINE Alu 6 303 -9 254 276 67 19 chr10 105572706 105572811 -40016477 + MIR3 SINE MIR 76 185 -23 2155 120 3 0 chr10 105572929 105573220 -40016068 - AluSx SINE Alu -20 292 1 1851 151 23 16 chr10 105573527 105573832 -40015456 - AluJo SINE Alu -3 309 3 2058 96 7 11 chr10 105574136 105574418 -40014870 + AluSq SINE Alu 1 281 -32 566 170 52 105 chr10 105574528 105574681 -40014607 + MER21B LTR ERV1 719 863 0 1696 201 105 39 chr10 105575448 105575886 -40013402 - MLT1C LTR MaLR 0 467 1 1129 266 75 61 chr10 105575948 105576209 -40013079 + MLT1K LTR MaLR 16 272 -316 1653 185 10 3 chr10 105576209 105576501 -40012787 + AluSx SINE Alu 1 294 -18 1129 266 75 61 chr10 105576501 105576553 -40012735 + MLT1K LTR MaLR 272 322 -266 2081 90 4 8 chr10 105576553 105576819 -40012469 + AluSq SINE Alu 1 265 -48 1129 266 75 61 chr10 105576819 105577061 -40012227 + MLT1K LTR MaLR 322 580 -8 303 244 12 61 chr10 105578266 105578348 -40010940 + MER5A DNA MER1_type 16 93 -96 238 313 61 10 chr10 105578433 105578532 -40010756 - L2 LINE L2 -1852 1462 1359 209 136 0 23 chr10 105578948 105578992 -40010296 + (TA)n Simple_repeat Simple_repeat 2 44 0 356 152 4 11 chr10 105579288 105579514 -40009774 + AluJb SINE Alu 1 280 -22 293 179 19 38 chr10 105579573 105579679 -40009609 + GA-rich Low_complexity Low_complexity 3 106 0 2220 82 33 13 chr10 105579704 105580008 -40009280 + AluSg SINE Alu 1 310 0 2108 101 7 10 chr10 105580021 105580319 -40008969 + AluSp SINE Alu 1 297 -16 2235 101 0 3 chr10 105580329 105580615 -40008673 + AluSq SINE Alu 1 285 -28 365 24 0 0 chr10 105580573 105580615 -40008673 + AluSp/q SINE Alu 244 319 0 234 29 29 0 chr10 105580615 105580649 -40008639 + (CAAA)n Simple_repeat Simple_repeat 2 164 0 803 240 278 53 chr10 105580656 105581123 -40008165 - MLT1K LTR MaLR -4 584 13 2419 83 0 3 chr10 105581437 105581737 -40007551 + AluSx SINE Alu 1 299 -13 270 253 25 13 chr10 105581755 105581834 -40007454 + MLT1H LTR MaLR 12 91 -458 2000 154 62 22 chr10 105581985 105582342 -40006946 + THE1C LTR MaLR 1 371 -4 482 177 173 137 chr10 105582352 105582601 -40006687 + MLT1H LTR MaLR 256 513 -36 1847 135 17 17 chr10 105582717 105583013 -40006275 + AluSx SINE Alu 1 296 -16 2222 116 0 0 chr10 105585493 105585786 -40003502 + AluSx SINE Alu 1 293 -19 228 35 0 0 chr10 105585791 105585820 -40003468 + (TA)n Simple_repeat Simple_repeat 1 29 0 2321 64 0 0 chr10 105586077 105586390 -40002898 + AluY SINE Alu 1 313 0 2225 105 0 7 chr10 105586865 105587169 -40002119 - AluSc SINE Alu -7 302 1 948 117 0 7 chr10 105587169 105587306 -40001982 - AluSq/x SINE Alu -176 136 1 4440 164 29 11 chr10 105587306 105588062 -40001226 + Tigger4(Zombi) DNA MER2_type 2 771 -1960 811 175 0 0 chr10 105588064 105588190 -40001098 + FLAM_C SINE Alu 1 126 -17 660 96 0 0 chr10 105588190 105588284 -40001004 + Tigger4(Zombi) DNA MER2_type 768 861 -1870 928 159 43 0 chr10 105588284 105588447 -40000841 - AluJo/FRAM SINE Alu -8 304 135 627 165 21 0 chr10 105588447 105588544 -40000744 - AluJ/FLAM SINE Alu -213 99 1 4757 104 22 16 chr10 105588545 105589239 -40000049 + Tigger4(Zombi) DNA MER2_type 850 1547 -1184 4214 124 52 7 chr10 105589238 105589931 -39999357 + Tigger4(Zombi) DNA MER2_type 1844 2567 -164 * 1573 170 4 19 chr10 105589931 105590202 -39999086 + AluJo SINE Alu 1 267 -45 1735 176 3 0 chr10 105590569 105590853 -39998435 - AluJo SINE Alu -7 305 21 1053 315 142 22 chr10 105590855 105591696 -39997592 - L2 LINE L2 -277 3036 2093 190 347 56 0 chr10 105591714 105591786 -39997502 + L2 LINE L2 3228 3303 -10 24 32 0 0 chr10 105591902 105591933 -39997355 + AT_rich Low_complexity Low_complexity 1 31 0 1849 136 45 3 chr10 105592297 105592583 -39996705 + AluSc SINE Alu 1 298 -11 29 28 0 0 chr10 105592884 105592920 -39996368 + AT_rich Low_complexity Low_complexity 1 36 0 1985 157 0 0 chr10 105592923 105593216 -39996072 - AluSx SINE Alu -19 293 1 312 91 0 0 chr10 105593545 105593589 -39995699 + (GA)n Simple_repeat Simple_repeat 1 44 0 183 42 0 0 chr10 105594359 105594383 -39994905 + (T)n Simple_repeat Simple_repeat 1 24 0 233 88 0 0 chr10 105594523 105594557 -39994731 - L2 LINE L2 -3 3310 3277 210 419 19 13 chr10 105594825 105594980 -39994308 - L2 LINE L2 -425 2889 2734 21 82 0 0 chr10 105595961 105596010 -39993278 + AT_rich Low_complexity Low_complexity 1 49 0 1525 175 98 23 chr10 105596405 105596801 -39992487 - L1MB7 LINE L1 -10 6174 5743 358 285 127 31 chr10 105596850 105597110 -39992178 + L1M4 LINE L1 3026 3310 -2836 658 176 42 92 chr10 105597361 105597400 -39991888 - FLAM_A SINE Alu -169 142 103 2427 63 13 0 chr10 105597400 105597701 -39991587 + AluY SINE Alu 1 305 -6 658 176 42 92 chr10 105597701 105597803 -39991485 - FLAM_A SINE Alu -208 103 8 215 224 17 0 chr10 105598226 105598284 -39991004 + CT-rich Low_complexity Low_complexity 2 60 0 1135 165 0 10 chr10 105598287 105598481 -39990807 - AluJb SINE Alu -37 275 84 3522 145 56 40 chr10 105599316 105599909 -39989379 - MER7C DNA MER2_type 0 602 1 265 261 135 18 chr10 105600584 105600695 -39988593 + L2 LINE L2 3149 3272 0 368 357 6 0 chr10 105600806 105600977 -39988311 + G-rich Low_complexity Low_complexity 2 173 0 1354 149 87 42 chr10 105601756 105602065 -39987223 - L1MB7 LINE L1 -42 6142 5820 1316 188 40 104 chr10 105602074 105602479 -39986809 - MLT1B LTR MaLR -11 379 1 1867 157 6 40 chr10 105602480 105602831 -39986457 - L1MB7 LINE L1 -352 5822 5484 1141 226 75 11 chr10 105602848 105603136 -39986152 - AluJo SINE Alu 0 305 1 3871 209 80 19 chr10 105603136 105604217 -39985071 - L1MB7 LINE L1 -1817 4329 3184 265 49 0 0 chr10 105604234 105604275 -39985013 - AluJo SINE Alu 0 302 262 194 88 0 29 chr10 105604759 105604793 -39984495 + (TCCC)n Simple_repeat Simple_repeat 4 36 0 1089 177 5 5 chr10 105604811 105605003 -39984285 - AluJo SINE Alu -31 281 90 2483 61 7 3 chr10 105606098 105606408 -39982880 - AluY SINE Alu 0 311 1 728 159 9 0 chr10 105606567 105606674 -39982614 + AluSq/x SINE Alu 2 109 -203 1241 46 13 0 chr10 105606783 105606934 -39982354 - AluY SINE Alu -150 161 9 2247 103 0 13 chr10 105607012 105607324 -39981964 - AluSc SINE Alu -1 308 1 2280 88 3 3 chr10 105608066 105608363 -39980925 + AluSq SINE Alu 1 297 -16 1608 149 78 11 chr10 105608643 105608924 -39980364 - AluSx SINE Alu -12 300 1 2164 183 75 110 chr10 105609327 105610070 -39979218 + L1MC4 LINE L1 6734 7450 -592 1007 202 40 9 chr10 105610081 105610304 -39978984 + L1MC4a LINE L1 7573 7802 -6 2002 136 16 7 chr10 105610332 105610640 -39978648 + AluSx SINE Alu 1 311 -1 205 171 24 0 chr10 105610740 105610781 -39978507 - L2 LINE L2 -2 3311 3270 204 67 0 0 chr10 105610830 105610860 -39978428 + (CAGT)n Simple_repeat Simple_repeat 1 30 0 411 276 88 29 chr10 105611049 105611166 -39978122 + MIR SINE MIR 77 208 -54 2234 116 3 0 chr10 105611166 105611469 -39977819 + AluSx SINE Alu 1 304 -8 411 276 88 29 chr10 105611469 105611521 -39977767 + MIR SINE MIR 208 256 -6 610 216 126 0 chr10 105612366 105612477 -39976811 + FLAM_A SINE Alu 1 125 -8 2475 52 0 0 chr10 105613548 105613839 -39975449 + AluY SINE Alu 1 291 -20 2108 123 13 0 chr10 105614272 105614580 -39974708 + AluSx SINE Alu 1 312 0 1644 178 7 7 chr10 105616065 105616374 -39972914 + AluJo SINE Alu 1 309 -3 296 133 0 0 chr10 105616528 105616573 -39972715 - MER57A LTR ERV1 -58 345 301 540 134 67 34 chr10 105616587 105616706 -39972582 + L1MC1 LINE L1 882 1004 -5855 * 1134 230 135 18 chr10 105616699 105617203 -39972085 + L1MC1 LINE L1 3716 4278 -2679 407 117 130 0 chr10 105617209 105617286 -39972002 + MLT1C LTR MaLR 8 94 -373 1470 118 153 8 chr10 105617303 105617558 -39971730 - MER44D DNA MER2_type -47 562 1 1680 221 21 18 chr10 105617558 105617938 -39971350 + MLT1C LTR MaLR 86 466 -1 6462 204 54 52 chr10 105617952 105618028 -39971260 + L1MC1 LINE L1 4289 4363 -2632 946 125 0 22 chr10 105618028 105618164 -39971124 - FLAM_C SINE Alu 0 133 1 6462 204 54 52 chr10 105618164 105618489 -39970799 + L1MC1 LINE L1 4363 4686 -2309 1461 141 52 33 chr10 105618489 105618759 -39970529 - AluJo SINE Alu -37 275 1 6462 204 54 52 chr10 105618759 105620195 -39969093 + L1MC1 LINE L1 4686 6145 -850 2205 83 3 7 chr10 105620195 105620485 -39968803 + AluSc SINE Alu 1 289 -20 6462 204 54 52 chr10 105620485 105620755 -39968533 + L1MC1 LINE L1 6145 6413 -582 6129 73 15 55 chr10 105620826 105622995 -39966293 - SVA Other Other -518 1386 3 2211 103 13 3 chr10 105623617 105623918 -39965370 - AluSx SINE Alu -8 304 1 375 232 122 73 chr10 105724256 105724420 -39864868 - MIR SINE MIR -70 192 21 562 233 69 63 chr10 105725783 105725972 -39863316 + MIR SINE MIR 66 255 -7 218 302 142 9 chr10 105726683 105726789 -39862499 - MIR SINE MIR -14 248 129 2441 85 0 13 chr10 105727591 105727898 -39861390 + AluSq SINE Alu 1 303 -10 1645 110 0 5 chr10 105728746 105728964 -39860324 - AluSq SINE Alu -89 224 8 1203 123 0 6 chr10 105729332 105729495 -39859793 + AluSg/x SINE Alu 136 297 -15 248 265 136 45 chr10 105729767 105729899 -39859389 - MIR SINE MIR -72 190 47 235 314 33 58 chr10 105730218 105730339 -39858949 + MIR SINE MIR 90 207 -55 269 313 15 0 chr10 105730847 105730914 -39858374 - L2 LINE L2 -1 3312 3245 2557 166 44 2 chr10 105731036 105731494 -39857794 + L1MC1 LINE L1 6649 7125 -19 247 167 50 17 chr10 105731494 105731554 -39857734 + MIR3 SINE MIR 114 175 -33 360 266 46 0 chr10 105733616 105733725 -39855563 - L1ME4a LINE L1 -23 6098 5985 345 186 23 35 chr10 105733835 105733921 -39855367 - L1ME4a LINE L1 -96 6025 5941 350 314 8 0 chr10 105734070 105734194 -39855094 - L1ME4a LINE L1 -440 5681 5557 904 183 143 29 chr10 105734560 105734744 -39854544 - MER33 DNA MER1_type -2261 324 98 2442 106 0 0 chr10 105734744 105735056 -39854232 - AluSx SINE Alu 0 312 1 904 183 143 29 chr10 105735056 105735144 -39854144 - MER33 DNA MER1_type -2487 98 21 920 190 13 66 chr10 105735755 105735825 -39853463 + MER72 LTR ERV1 9 81 -641 1709 109 4 0 chr10 105735825 105736055 -39853233 - AluSq SINE Alu -25 288 58 920 190 13 66 chr10 105736055 105736146 -39853142 + MER72 LTR ERV1 81 157 -565 1525 181 10 45 chr10 105736146 105736456 -39852832 - AluJo SINE Alu -13 299 1 920 190 13 66 chr10 105736456 105736519 -39852769 + MER72 LTR ERV1 157 222 -500 1238 215 65 4 chr10 105736523 105736784 -39852504 - AluJo SINE Alu -35 277 1 2911 167 47 0 chr10 105736784 105737276 -39852012 + MER72 LTR ERV1 208 722 0 257 305 47 23 chr10 105737467 105737595 -39851693 + MIR SINE MIR 42 172 -90 330 149 0 0 chr10 105738712 105738759 -39850529 + Alu SINE Alu 4 50 -251 1196 99 19 0 chr10 105738759 105738921 -39850367 + AluSg/x SINE Alu 139 303 -7 949 153 93 0 chr10 105739641 105739791 -39849497 + FRAM SINE Alu 1 164 -2 234 0 0 0 chr10 105740336 105740362 -39848926 + (T)n Simple_repeat Simple_repeat 1 26 0 221 279 49 0 chr10 105740980 105741041 -39848247 - L2 LINE L2 -1 3271 3208 2155 90 56 19 chr10 105743177 105743500 -39845788 + L1MA1 LINE L1 5964 6298 -4 2302 94 0 7 chr10 105744101 105744408 -39844880 - AluSq SINE Alu -8 305 1 2035 103 10 33 chr10 105746270 105746572 -39842716 - AluSc SINE Alu -14 295 1 805 163 37 7 chr10 105746596 105746731 -39842557 + FAM SINE Alu 31 169 -16 188 347 167 7 chr10 105746764 105746908 -39842380 - MIR3 SINE MIR -25 183 17 31 0 0 0 chr10 105748481 105748512 -39840776 + AT_rich Low_complexity Low_complexity 1 31 0 383 284 123 41 chr10 105749829 105750121 -39839167 - L1ME LINE L1 -460 5661 5346 1463 133 5 0 chr10 105752239 105752457 -39836831 + AluSx SINE Alu 1 219 -93 24 0 0 0 chr10 105753068 105753092 -39836196 + AT_rich Low_complexity Low_complexity 1 24 0 373 210 71 37 chr10 105753412 105753559 -39835729 - L1ME3A LINE L1 -3 6161 6002 28 48 0 0 chr10 105753618 105753660 -39835628 + AT_rich Low_complexity Low_complexity 1 42 0 1140 279 75 16 chr10 105754336 105754720 -39834568 - L1M3a LINE L1 -5520 435 29 2791 234 161 77 chr10 105754792 105756716 -39832572 - HAL1 LINE L1 -305 2202 118 1823 172 10 0 chr10 105756752 105757048 -39832240 + AluJb SINE Alu 1 299 -13 239 254 42 0 chr10 105757623 105757694 -39831594 - MIR SINE MIR -150 112 39 213 295 179 9 chr10 105757981 105758093 -39831195 + L2 LINE L2 3179 3309 -4 2372 120 26 104 chr10 105758619 105759110 -39830178 + MLT2A2 LTR ERVL 1 453 0 32 57 0 0 chr10 105759387 105759440 -39829848 + AT_rich Low_complexity Low_complexity 1 53 0 23 0 0 0 chr10 105759701 105759724 -39829564 + AT_rich Low_complexity Low_complexity 1 23 0 260 224 53 13 chr10 105759938 105760014 -39829274 - L2 LINE L2 0 3272 3194 320 330 141 73 chr10 105760030 105760236 -39829052 + MIR SINE MIR 14 233 -29 2201 131 0 0 chr10 105760335 105760647 -39828641 + AluSx SINE Alu 1 312 0 2197 98 28 0 chr10 105760854 105761139 -39828149 + AluSc SINE Alu 1 293 -16 2094 109 28 0 chr10 105761933 105762218 -39827070 - AluSx SINE Alu -19 293 1 313 191 35 104 chr10 105762831 105762931 -39826357 - LTR41 LTR ERVL -8 765 672 2334 73 28 3 chr10 105762931 105763220 -39826068 + AluSq SINE Alu 1 296 -17 313 191 35 104 chr10 105763220 105763234 -39826054 - LTR41 LTR ERVL -101 672 659 652 246 48 21 chr10 105763711 105763898 -39825390 - LTR41 LTR ERVL -581 192 1 313 233 55 0 chr10 105763994 105764067 -39825221 + MIR3 SINE MIR 84 160 -48 258 220 159 0 chr10 105764536 105764668 -39824620 + L1MCa LINE L1 2201 2353 -4073 2201 111 0 10 chr10 105764688 105764995 -39824293 - AluSx SINE Alu -8 304 1 2041 134 10 0 chr10 105764997 105765288 -39824000 - AluSx SINE Alu -18 294 1 369 0 0 0 chr10 105765718 105765759 -39823529 + (CA)n Simple_repeat Simple_repeat 2 42 0 23 0 0 0 chr10 105766571 105766594 -39822694 + AT_rich Low_complexity Low_complexity 1 23 0 427 306 89 6 chr10 105766660 105766840 -39822448 - MIR SINE MIR -40 222 28 2016 142 3 7 chr10 105766979 105767282 -39822006 + AluJb SINE Alu 6 307 -5 275 274 110 0 chr10 105767669 105767742 -39821546 + MIR SINE MIR 50 130 -78 228 135 0 0 chr10 105769037 105769074 -39820214 + (TG)n Simple_repeat Simple_repeat 2 38 0 392 263 51 45 chr10 105769714 105769822 -39819466 - MIR SINE MIR -33 229 118 2626 138 8 10 chr10 105769822 105770213 -39819075 + MLT1B LTR MaLR 1 390 0 392 263 51 45 chr10 105770213 105770260 -39819028 - MIR SINE MIR -144 118 73 2060 135 0 16 chr10 105770301 105770612 -39818676 - AluJo SINE Alu -6 306 1 2274 110 0 3 chr10 105771125 105771435 -39817853 - AluSx SINE Alu -3 309 1 1952 133 21 0 chr10 105771886 105772171 -39817117 + AluSx SINE Alu 1 291 -21 2838 3 0 0 chr10 105774128 105774430 -39814858 + AluYa5 SINE Alu 1 302 -9 2651 55 0 0 chr10 105774844 105775154 -39814134 - AluY SINE Alu -1 310 1 25 0 0 0 chr10 105775752 105775777 -39813511 + AT_rich Low_complexity Low_complexity 1 25 0 2427 114 35 44 chr10 105776209 105776280 -39813008 - THE1B LTR MaLR 0 364 294 2117 126 13 0 chr10 105776280 105776582 -39812706 + AluSg SINE Alu 1 306 -4 2427 114 35 44 chr10 105776582 105776877 -39812411 - THE1B LTR MaLR -70 294 1 667 270 93 22 chr10 105776877 105777103 -39812185 - MIR SINE MIR -4 258 17 1696 79 32 0 chr10 105777103 105777319 -39811969 - AluSg SINE Alu -85 225 3 866 232 280 11 chr10 105777507 105777861 -39811427 - Charlie1a DNA MER1_type -1000 455 7 2371 90 3 6 chr10 105777950 105778261 -39811027 - AluSg SINE Alu 0 310 1 2432 73 0 7 chr10 105780273 105780574 -39808714 + AluY SINE Alu 1 299 -12 2292 108 0 3 chr10 105780949 105781254 -39808034 + AluSq SINE Alu 1 304 -9 2216 121 0 0 chr10 105781348 105781646 -39807642 + AluSx SINE Alu 1 298 -14 471 59 0 0 chr10 105781754 105781822 -39807466 + Alu SINE Alu 243 310 0 4514 175 75 21 chr10 105781826 105782950 -39806338 + L1MD1 LINE L1 5025 6222 -20 2227 130 0 0 chr10 105783327 105783635 -39805653 + AluSx SINE Alu 1 308 -4 2398 180 128 28 chr10 105783700 105784350 -39804938 - Charlie1 DNA MER1_type 0 2761 2047 292 170 0 0 chr10 105784358 105784411 -39804877 + Alu SINE Alu 1 53 -250 2671 143 42 2 chr10 105785937 105786392 -39802896 - L1MB2 LINE L1 -31 6140 5668 577 291 29 12 chr10 105786730 105786902 -39802386 - MIR SINE MIR -57 205 31 190 343 153 7 chr10 105787047 105787184 -39802104 + MIR SINE MIR 30 186 -76 1933 160 47 11 chr10 105787417 105787779 -39801509 - L1MA9 LINE L1 0 6312 5938 2213 128 0 0 chr10 105787816 105788114 -39801174 - AluSx SINE Alu -14 298 1 1598 184 0 26 chr10 105788120 105788429 -39800859 - AluJb SINE Alu -11 301 1 2169 87 4 0 chr10 105788434 105788711 -39800577 - AluSc SINE Alu -3 306 29 706 279 169 13 chr10 105788946 105789247 -39800041 + L2 LINE L2 2966 3313 0 233 239 152 76 chr10 105789277 105789369 -39799919 + MIR SINE MIR 28 126 -136 662 185 199 7 chr10 105789385 105789536 -39799752 - AluJo SINE Alu -13 299 120 221 256 58 66 chr10 105789550 105789671 -39799617 + MIR SINE MIR 138 257 -5 1217 154 62 14 chr10 105789883 105790091 -39799197 - MER20 DNA MER1_type 0 219 2 198 0 0 0 chr10 105790327 105790349 -39798939 + (A)n Simple_repeat Simple_repeat 1 22 0 251 197 113 42 chr10 105790488 105790559 -39798729 - MER20B DNA MER1_type -507 276 201 1344 91 0 11 chr10 105791502 105791677 -39797611 - AluSg/x SINE Alu -6 306 134 2173 101 3 0 chr10 105791677 105791964 -39797324 - AluSg1 SINE Alu -21 288 1 194 213 64 0 chr10 105792392 105792439 -39796849 - L2 LINE L2 -5 3308 3259 2211 114 0 7 chr10 105792954 105793261 -39796027 + AluSq SINE Alu 2 306 -7 342 0 0 0 chr10 105793272 105793310 -39795978 + (CA)n Simple_repeat Simple_repeat 2 39 0 332 250 111 0 chr10 105793436 105793544 -39795744 + MIR SINE MIR 109 228 -34 1503 163 38 75 chr10 105793878 105794198 -39795090 + AluJo SINE Alu 1 308 -4 2131 119 24 0 chr10 105794394 105794687 -39794601 - AluSx SINE Alu -12 300 1 181 263 0 0 chr10 105795300 105795338 -39793950 + L2 LINE L2 3186 3223 -49 342 248 87 13 chr10 105795609 105795758 -39793530 + Charlie7 DNA MER1_type 2453 2612 0 1621 164 30 33 chr10 105797112 105797411 -39791877 - AluJo SINE Alu -14 298 1 241 79 0 0 chr10 105797516 105797554 -39791734 + L1MC4 LINE L1 8005 8042 0 242 245 130 78 chr10 105797657 105797849 -39791439 + MIR SINE MIR 48 249 -13 202 214 0 71 chr10 105798706 105798776 -39790512 + GA-rich Low_complexity Low_complexity 3 67 0 825 232 93 13 chr10 105798777 105799014 -39790274 + MIR SINE MIR 5 260 -2 301 368 11 0 chr10 105799095 105799190 -39790098 - MIR SINE MIR -97 111 16 1904 207 48 48 chr10 105799301 105799741 -39789547 - Tigger7 DNA MER2_type -2047 440 1 2185 116 0 7 chr10 105800256 105800548 -39788740 + AluSx SINE Alu 1 290 -22 21 0 0 0 chr10 105800613 105800634 -39788654 + AT_rich Low_complexity Low_complexity 1 21 0 221 259 19 0 chr10 105800935 105800989 -39788299 + L2 LINE L2 3177 3231 -41 951 105 0 17 chr10 105801345 105801526 -39787762 + (TTCC)n Simple_repeat Simple_repeat 1 178 0 243 125 0 0 chr10 105801527 105801567 -39787721 + (TTCCC)n Simple_repeat Simple_repeat 5 44 0 1468 158 12 0 chr10 105801679 105801920 -39787368 + AluSx SINE Alu 52 295 -17 1012 194 80 5 chr10 105803263 105803464 -39785824 - MER20B DNA MER1_type 0 219 4 2275 92 0 0 chr10 105804117 105804437 -39784851 - AluSx SINE Alu 0 320 1 2241 104 13 0 chr10 105804514 105804813 -39784475 - AluSx SINE Alu -9 303 1 208 326 125 49 chr10 105805203 105805387 -39783901 - L3 LINE CR1 -472 1105 908 2064 114 31 3 chr10 105805525 105805815 -39783473 - AluSx SINE Alu -14 298 1 2248 74 10 3 chr10 105806623 105806920 -39782368 + AluSq SINE Alu 1 299 -14 348 326 124 6 chr10 105806958 105807136 -39782152 + MIR SINE MIR 21 219 -43 1326 122 91 0 chr10 105807285 105807506 -39781782 + LTR9B LTR ERV1 404 644 0 343 268 102 64 chr10 105807901 105808058 -39781230 - MIR3 SINE MIR -44 164 2 435 187 11 0 chr10 105808123 105808214 -39781074 + L1MA9 LINE L1 6189 6280 -32 518 283 102 51 chr10 105808272 105808586 -39780702 + HAL1 LINE L1 116 445 -2062 1363 171 97 133 chr10 105808846 105809320 -39779968 + MLT1E3 LTR MaLR 189 615 -9 239 149 64 0 chr10 105809560 105809607 -39779681 - Alu SINE Alu -252 50 1 5345 192 103 50 chr10 105809638 105810123 -39779165 - L1MDa LINE L1 -4977 1563 1105 2004 137 14 0 chr10 105810123 105810416 -39778872 - AluSx SINE Alu -15 297 1 5345 192 103 50 chr10 105810416 105811108 -39778180 - L1MDa LINE L1 -5435 1105 292 1048 170 0 6 chr10 105811108 105811279 -39778009 - FAM SINE Alu -5 170 1 5345 192 103 50 chr10 105811279 105811564 -39777724 - L1MDa LINE L1 -6248 292 23 2177 256 57 0 chr10 105812028 105812607 -39776681 - L1ME2 LINE L1 -99 6065 5454 226 194 54 54 chr10 105812688 105812781 -39776507 - L1P5 LINE L1 -724 5430 5338 180 0 0 0 chr10 105812834 105812854 -39776434 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1631 91 13 26 chr10 105813049 105813281 -39776007 - AluSx SINE Alu -75 237 9 2327 91 7 13 chr10 105813309 105813616 -39775672 - AluSx SINE Alu -7 305 1 719 219 19 38 chr10 105814723 105814883 -39774405 + AluJo SINE Alu 126 282 -30 194 0 39 0 chr10 105814887 105814913 -39774375 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1177 243 115 90 chr10 105814913 105815085 -39774203 - L1ME3A LINE L1 -2 6168 6002 2052 129 0 16 chr10 105815085 105815396 -39773892 - AluY SINE Alu -1 310 5 1177 243 115 90 chr10 105815396 105815920 -39773368 - L1ME3A LINE L1 -168 6002 5455 1182 210 27 8 chr10 105816383 105816645 -39772643 - L1MD3 LINE L1 0 7995 7729 273 266 0 0 chr10 105816644 105816708 -39772580 - L1MC/D LINE L1 -1982 5826 5763 * 294 185 62 0 chr10 105816718 105816783 -39772505 - L1MC/D LINE L1 -641 5523 5455 211 342 66 0 chr10 105816793 105816869 -39772419 + MIR3 SINE MIR 104 184 -24 271 241 158 45 chr10 105816933 105817066 -39772222 - L1MC/D LINE L1 -2070 5738 5591 652 201 58 26 chr10 105817183 105817337 -39771951 - MER3 DNA MER1_type -50 159 1 300 220 144 17 chr10 105817684 105817785 -39771503 + MLT1E2 LTR MaLR 122 258 -366 1671 245 40 23 chr10 105817815 105818296 -39770992 - MER65B LTR ERV1 -42 489 1 1468 260 31 18 chr10 105818296 105818677 -39770611 + MLT1E2 LTR MaLR 241 626 0 540 209 18 0 chr10 105819103 105819213 -39770075 + MER58 DNA MER1_type 2309 2420 0 529 127 0 0 chr10 105819981 105820060 -39769228 + AluS SINE Alu 2 80 -233 1942 132 7 7 chr10 105820177 105820480 -39768808 - AluSq SINE Alu -10 303 1 3604 243 92 19 chr10 105820486 105821645 -39767643 - L1M4 LINE L1 -1885 4261 2870 1639 193 3 7 chr10 105821645 105821946 -39767342 - AluJo SINE Alu -12 300 1 3604 243 92 19 chr10 105821946 105822372 -39766916 - L1M4 LINE L1 -3276 2870 2477 3469 122 27 0 chr10 105823091 105823575 -39765713 + LOR1a LTR ERV1 1 497 0 217 204 0 23 chr10 105824665 105824709 -39764579 - MIR3 SINE MIR -15 193 151 336 212 81 20 chr10 105825608 105825707 -39763581 - L1MC5 LINE L1 -100 7861 7757 1235 192 216 38 chr10 105825774 105826227 -39763061 + LTR64 LTR ERVK 23 556 -2 3820 176 46 45 chr10 105826236 105826291 -39762997 - L1MC3 LINE L1 -10 7775 7722 2119 106 6 31 chr10 105826291 105826611 -39762677 + AluSx SINE Alu 1 312 0 3820 176 46 45 chr10 105826611 105827495 -39761793 - L1MC3 LINE L1 -63 7722 6835 820 229 51 11 chr10 105827628 105827803 -39761485 - AluJo SINE Alu 0 312 131 885 137 30 15 chr10 105827853 105827984 -39761304 - AluJo SINE Alu -169 133 1 268 306 24 16 chr10 105828169 105828293 -39760995 - L1MC4 LINE L1 -573 7469 7345 1277 235 84 64 chr10 105828316 105829095 -39760193 - L1MC4a LINE L1 -632 7216 6451 192 359 22 22 chr10 105831157 105831249 -39758039 + MIR SINE MIR 12 103 -105 1425 178 0 53 chr10 105832862 105833166 -39756122 - AluJo SINE Alu -14 298 11 21 57 0 0 chr10 105834339 105834374 -39754914 + AT_rich Low_complexity Low_complexity 1 35 0 518 290 16 38 chr10 105834447 105834630 -39754658 + LTR33 LTR ERVL 10 188 -333 586 248 25 12 chr10 105834704 105834865 -39754423 + LTR33 LTR ERVL 354 516 -5 256 361 54 23 chr10 105835491 105835621 -39753667 + L3 LINE CR1 464 597 -980 301 367 48 68 chr10 105835666 105835977 -39753311 - L2 LINE L2 -78 3194 2890 565 210 0 0 chr10 105836288 105836388 -39752900 + AluJ/FLAM SINE Alu 1 100 -212 327 215 66 25 chr10 105836921 105837042 -39752246 + L1MEc LINE L1 399 524 -5872 2520 226 99 60 chr10 105838531 105839329 -39749959 + L1MEc LINE L1 56 906 -5490 1783 130 38 38 chr10 105839329 105839621 -39749667 + AluJo SINE Alu 3 294 -18 2520 226 99 60 chr10 105839621 105839869 -39749419 + L1MEc LINE L1 906 1143 -5253 383 192 154 0 chr10 105839870 105839948 -39749340 + L2 LINE L2 2217 2306 -1008 788 199 104 50 chr10 105839971 105840212 -39749076 + L2 LINE L2 2269 2522 -792 773 269 78 42 chr10 105840205 105840513 -39748775 + L2 LINE L2 2995 3313 0 * 23 0 0 0 chr10 105840576 105840599 -39748689 + AT_rich Low_complexity Low_complexity 1 23 0 320 281 12 12 chr10 105840637 105840719 -39748569 - L2 LINE L2 -23 3290 3209 2349 113 0 0 chr10 105840932 105841241 -39748047 - AluSx SINE Alu -3 309 1 621 240 36 31 chr10 105841921 105842146 -39747142 - LTR67 LTR ERVL -1 556 331 342 0 0 0 chr10 105842365 105842403 -39746885 + (CA)n Simple_repeat Simple_repeat 2 39 0 2481 105 25 0 chr10 105843451 105843804 -39745484 - THE1B LTR MaLR 0 364 3 1705 250 55 5 chr10 105844097 105844666 -39744622 - L1MD3 LINE L1 -16 7979 7383 1667 60 39 4 chr10 105846950 105847184 -39742104 + MER75B DNA T2_type 1 242 -1 2116 134 0 0 chr10 105847501 105847800 -39741488 + AluSg SINE Alu 1 299 -11 1249 180 5 0 chr10 105848285 105848496 -39740792 + AluSx SINE Alu 1 212 -100 255 219 26 53 chr10 105849363 105849477 -39739811 - MER33 DNA MER1_type 0 324 214 241 203 165 60 chr10 105849466 105849599 -39739689 - MER33 DNA MER1_type -173 151 5 * 1415 243 105 89 chr10 105849603 105850234 -39739054 + MER115 DNA AcHobo 53 693 0 294 155 17 0 chr10 105850791 105850849 -39738439 - MLT1G1 LTR MaLR 0 595 537 229 250 0 0 chr10 105851141 105851197 -39738091 - MLT1I LTR MaLR -274 135 80 2074 133 46 27 chr10 105855295 105855663 -39733625 + THE1C LTR MaLR 1 375 0 1797 164 7 26 chr10 105856859 105857169 -39732119 - AluJb SINE Alu -8 304 1 303 346 24 39 chr10 105857180 105857307 -39731981 + L2 LINE L2 3148 3272 0 2189 128 27 0 chr10 105858415 105858743 -39730545 + MER1B DNA MER1_type 1 337 0 23 33 0 0 chr10 105859221 105859251 -39730037 + AT_rich Low_complexity Low_complexity 1 30 0 564 134 31 34 chr10 105859256 105859714 -39729574 + (TTATA)n Simple_repeat Simple_repeat 1 456 0 557 128 5 53 chr10 105859706 105859894 -39729394 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 * 367 151 62 3 chr10 105859896 105860189 -39729099 + (TA)n Simple_repeat Simple_repeat 1 310 0 207 55 91 36 chr10 105860189 105860244 -39729044 + (TATAA)n Simple_repeat Simple_repeat 1 58 0 780 106 13 41 chr10 105860246 105860589 -39728699 + (TTATA)n Simple_repeat Simple_repeat 1 333 0 928 202 33 6 chr10 105961906 105962089 -39627199 + MER58A DNA MER1_type 37 224 0 222 217 36 36 chr10 105962121 105962204 -39627084 + T-rich Low_complexity Low_complexity 1 83 0 198 0 0 0 chr10 105962773 105962795 -39626493 + (TA)n Simple_repeat Simple_repeat 2 23 0 841 132 15 0 chr10 105962795 105962931 -39626357 - FLAM_C SINE Alu 0 143 6 320 48 0 24 chr10 105963285 105963327 -39625961 - AluY SINE Alu -21 281 241 624 191 0 69 chr10 105963415 105963546 -39625742 - AluJo SINE Alu -106 206 85 468 183 122 46 chr10 105964086 105964217 -39625071 + MER58C DNA MER1_type 74 214 -1 226 0 59 0 chr10 105966833 105966867 -39622421 + (TA)n Simple_repeat Simple_repeat 1 36 0 27 0 0 0 chr10 105968669 105968696 -39620592 + AT_rich Low_complexity Low_complexity 1 27 0 285 219 234 51 chr10 105969979 105970116 -39619172 + Charlie8 DNA MER1_type 1 162 -2255 207 0 0 0 chr10 105972787 105972810 -39616478 + (TAGA)n Simple_repeat Simple_repeat 1 23 0 221 247 65 54 chr10 105972864 105972957 -39616331 - MIR3 SINE MIR -37 171 78 325 85 21 0 chr10 105973695 105973742 -39615546 - L2 LINE L2 -3 3310 3263 295 351 54 0 chr10 105974418 105974586 -39614702 + L3 LINE CR1 1390 1566 -11 217 238 32 0 chr10 105975263 105975326 -39613962 + (CAGCC)n Simple_repeat Simple_repeat 2 66 0 190 273 246 9 chr10 105976261 105976371 -39612917 - MIR SINE MIR -80 182 47 1080 144 5 5 chr10 105978107 105978295 -39610993 + AluSg/x SINE Alu 120 307 -3 1305 133 170 12 chr10 105978470 105978790 -39610498 - AluSg1 SINE Alu 0 358 1 360 213 106 112 chr10 105978794 105978982 -39610306 - MER112 DNA MER1_type -72 188 2 298 305 39 39 chr10 105979256 105979384 -39609904 - L2 LINE L2 -23 3249 3122 23 33 0 0 chr10 105980000 105980030 -39609258 + AT_rich Low_complexity Low_complexity 1 30 0 36 0 0 0 chr10 105980071 105980107 -39609181 + AT_rich Low_complexity Low_complexity 1 36 0 23 33 0 0 chr10 105980470 105980500 -39608788 + AT_rich Low_complexity Low_complexity 1 30 0 2220 78 3 3 chr10 105981026 105981319 -39607969 - AluY SINE Alu -18 293 1 1597 181 0 7 chr10 105981546 105981828 -39607460 - AluJb SINE Alu -32 280 1 1636 161 3 11 chr10 105981932 105982217 -39607071 - AluSx SINE Alu -23 289 7 194 283 33 33 chr10 105982279 105982339 -39606949 + MIR3 SINE MIR 125 184 -24 299 261 78 78 chr10 105982720 105982835 -39606453 + MER5B DNA MER1_type 29 143 -35 443 130 76 11 chr10 105982847 105982939 -39606349 - L1MB2 LINE L1 -2 6169 6072 518 281 82 58 chr10 105983395 105983456 -39605832 + MIR SINE MIR 15 73 -189 1654 143 11 18 chr10 105983456 105983742 -39605546 + AluJb SINE Alu 13 296 -16 518 281 82 58 chr10 105983742 105983919 -39605369 + MIR SINE MIR 73 250 -12 2153 99 0 40 chr10 105984558 105984882 -39604406 - AluY SINE Alu 0 311 1 358 115 16 0 chr10 105984907 105984968 -39604320 + AluS SINE Alu 1 62 -238 3109 176 31 34 chr10 105985070 105985132 -39604156 + L1MB8 LINE L1 4635 4696 -1482 2101 94 6 31 chr10 105985132 105985451 -39603837 - AluY SINE Alu 0 311 1 3109 176 31 34 chr10 105985451 105986860 -39602428 + L1MB8 LINE L1 4696 6172 -6 309 290 70 0 chr10 105987075 105987175 -39602113 - MIR SINE MIR -142 120 14 27 0 0 0 chr10 105987816 105987843 -39601445 + AT_rich Low_complexity Low_complexity 1 27 0 181 265 103 44 chr10 105991067 105991135 -39598153 - L2 LINE L2 -43 3229 3158 809 209 68 0 chr10 105991437 105991614 -39597674 + MER5A DNA MER1_type 1 189 0 34 0 0 0 chr10 105991931 105991965 -39597323 + AT_rich Low_complexity Low_complexity 1 34 0 1960 131 0 7 chr10 105994327 105994632 -39594656 + AluSx SINE Alu 1 303 -9 699 230 0 7 chr10 105995069 105995245 -39594043 - FRAM SINE Alu 0 173 1 278 279 0 0 chr10 105995371 105995432 -39593856 - MIR SINE MIR -138 124 64 663 305 59 25 chr10 105996232 105996471 -39592817 - MIR SINE MIR -6 256 10 1996 96 11 4 chr10 105997268 105997548 -39591740 + AluSx SINE Alu 1 282 -30 183 42 0 0 chr10 105997554 105997578 -39591710 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 903 119 0 0 chr10 105997971 105998105 -39591183 + AluJo SINE Alu 1 134 -178 906 277 57 39 chr10 106000554 106000886 -39588402 - MER46C DNA MER2_type 0 338 1 534 294 77 0 chr10 106000887 106001057 -39588231 - MIR SINE MIR 0 262 80 301 224 101 136 chr10 106001787 106002104 -39587184 - L2 LINE L2 -41 3231 2926 2188 101 3 0 chr10 106002105 106002401 -39586887 + AluSx SINE Alu 1 297 -15 426 291 27 20 chr10 106002535 106002683 -39586605 + Charlie2 DNA MER1_type 1 149 -2633 591 215 118 18 chr10 106002810 106003038 -39586250 + Charlie2 DNA MER1_type 1856 2106 -756 371 208 28 0 chr10 106003238 106003310 -39585978 - AluJb SINE Alu -191 111 38 * 545 227 27 38 chr10 106003308 106003493 -39585795 + Charlie2 DNA MER1_type 2680 2862 0 2307 84 7 0 chr10 106004480 106004788 -39584500 - AluSq SINE Alu -3 310 1 431 35 0 17 chr10 106005438 106005496 -39583792 + (TTCA)n Simple_repeat Simple_repeat 4 60 0 224 304 13 101 chr10 106005499 106005657 -39583631 - L2 LINE L2 -1 3271 3128 243 309 109 0 chr10 106005901 106006011 -39583277 + MIR SINE MIR 107 228 -34 1754 161 13 7 chr10 106006604 106006914 -39582374 - AluJo SINE Alu 0 312 1 556 207 17 0 chr10 106006917 106007033 -39582255 + L1ME3A LINE L1 6045 6162 -8 535 252 126 56 chr10 106008158 106008200 -39581088 - MIR SINE MIR -5 257 219 2168 118 0 0 chr10 106008200 106008504 -39580784 - AluSx SINE Alu -8 304 1 535 252 126 56 chr10 106008504 106008675 -39580613 - MIR SINE MIR -43 219 29 369 316 32 21 chr10 106008744 106008931 -39580357 - MIR SINE MIR -54 208 20 524 111 11 44 chr10 106009026 106009116 -39580172 + L1MB5 LINE L1 6082 6168 -6 604 290 145 0 chr10 106009122 106009370 -39579918 + L1MC/D LINE L1 5517 5800 -2008 312 306 133 28 chr10 106009499 106009696 -39579592 - L1MC4a LINE L1 -1908 5900 5669 1686 148 3 48 chr10 106009696 106010007 -39579281 - AluSx SINE Alu -15 297 1 312 306 133 28 chr10 106010007 106010064 -39579224 - L1MC4a LINE L1 -2139 5669 5619 526 326 25 0 chr10 106010458 106010654 -39578634 + L1MEd LINE L1 565 765 -5354 448 259 75 79 chr10 106010860 106011126 -39578162 + L2 LINE L2 2827 3091 -181 519 283 26 0 chr10 106011365 106011517 -39577771 - MER117 DNA MER1_type -34 163 8 2959 173 38 3 chr10 106012048 106012625 -39576663 - L1MB4 LINE L1 0 6180 5584 314 342 139 16 chr10 106012759 106012946 -39576342 + MIR SINE MIR 1 210 -52 517 292 62 21 chr10 106014263 106014455 -39574833 + MIR SINE MIR 63 262 0 455 217 33 0 chr10 106014621 106014713 -39574575 - MIR SINE MIR -96 166 72 2148 107 0 7 chr10 106014722 106015022 -39574266 + AluSx SINE Alu 1 298 -14 833 211 57 64 chr10 106015152 106015431 -39573857 + L1ME1 LINE L1 5712 5988 -178 560 174 0 0 chr10 106015534 106015626 -39573662 - AluJb SINE Alu -99 213 122 950 275 22 4 chr10 106015853 106016126 -39573162 + L1ME3A LINE L1 5691 5968 -202 226 322 35 41 chr10 106016177 106016259 -39573029 + L1ME3A LINE L1 5965 6046 -124 2152 115 0 0 chr10 106016259 106016563 -39572725 - AluSx SINE Alu -8 304 1 226 322 35 41 chr10 106016563 106016651 -39572637 + L1ME3A LINE L1 6046 6134 -36 203 297 108 20 chr10 106017324 106017472 -39571816 - MIR SINE MIR -79 183 23 21 36 0 0 chr10 106021175 106021203 -39568085 + AT_rich Low_complexity Low_complexity 1 28 0 227 48 0 71 chr10 106022898 106022940 -39566348 + (A)n Simple_repeat Simple_repeat 1 39 0 22 0 0 0 chr10 106025360 106025382 -39563906 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr10 106026123 106026153 -39563135 + AT_rich Low_complexity Low_complexity 1 30 0 23 54 0 0 chr10 106027664 106027701 -39561587 + AT_rich Low_complexity Low_complexity 1 37 0 1836 132 4 0 chr10 106028931 106029237 -39560051 - AluJb SINE Alu 0 307 1 394 230 15 82 chr10 106030234 106030369 -39558919 + L2 LINE L2 3188 3313 0 213 345 52 26 chr10 106030394 106030510 -39558778 - MIR SINE MIR -138 124 6 384 262 19 0 chr10 106030702 106030805 -39558483 - MIR SINE MIR -68 194 90 316 379 92 6 chr10 106030864 106031038 -39558250 + L1ME4a LINE L1 5593 5781 -340 2149 108 3 0 chr10 106031221 106031518 -39557770 - AluSx SINE Alu -14 298 1 416 207 97 48 chr10 106031631 106031776 -39557512 + L1ME4a LINE L1 5815 5966 -155 272 322 28 14 chr10 106033556 106033699 -39555589 + L2 LINE L2 2652 2796 -518 1632 151 25 14 chr10 106033867 106034146 -39555142 + AluJo SINE Alu 1 282 -30 189 74 0 0 chr10 106034150 106034177 -39555111 + (CAA)n Simple_repeat Simple_repeat 2 28 0 377 259 113 89 chr10 106034246 106034539 -39554749 + L1ME4a LINE L1 5355 5654 -467 1657 185 53 15 chr10 106034592 106034933 -39554355 + MLT1A1 LTR MaLR 12 365 0 543 265 58 113 chr10 106034937 106035318 -39553970 + L1ME4a LINE L1 5699 6058 -63 380 303 25 31 chr10 106035361 106035523 -39553765 + L1MC4a LINE L1 5781 5941 -1867 969 156 40 0 chr10 106035623 106035796 -39553492 - MER3 DNA MER1_type 0 209 30 189 238 343 38 chr10 106038230 106038335 -39550953 + MIR3 SINE MIR 21 157 -51 648 242 0 0 chr10 106038455 106038707 -39550581 + (CAGG)n Simple_repeat Simple_repeat 1 252 0 818 124 0 0 chr10 106039811 106039924 -39549364 + AluSp/q SINE Alu 190 302 -11 1107 215 22 9 chr10 106040659 106040887 -39548401 + MSTB LTR MaLR 196 426 0 1388 208 34 93 chr10 106040887 106041345 -39547943 + L1MC5 LINE L1 7157 7582 -379 2147 115 0 3 chr10 106041345 106041649 -39547639 + AluSg SINE Alu 3 305 -5 1388 208 34 93 chr10 106041649 106041718 -39547570 + L1MC5 LINE L1 7582 7653 -308 1506 185 7 30 chr10 106041779 106042077 -39547211 - AluJo SINE Alu -21 291 1 219 274 0 0 chr10 106042170 106042185 -39547103 + (CAT)n Simple_repeat Simple_repeat 3 17 -36 736 238 35 6 chr10 106042185 106042357 -39546931 - MER104 DNA MER2_type 0 180 4 219 274 0 0 chr10 106042357 106042392 -39546896 + (CAT)n Simple_repeat Simple_repeat 16 53 0 515 246 186 10 chr10 106042400 106042599 -39546689 - MIR SINE MIR -9 253 20 514 273 30 0 chr10 106043787 106043919 -39545369 + MER91B DNA MER1_type 55 190 0 345 264 16 40 chr10 106044416 106044541 -39544747 - L2 LINE L2 -342 2971 2850 229 309 21 21 chr10 106044580 106044677 -39544611 - L2 LINE L2 -591 2723 2627 351 169 17 0 chr10 106044928 106044987 -39544301 - MER91 DNA MER1_type -3 137 78 209 339 118 0 chr10 106046298 106046425 -39542863 - MIR SINE MIR -74 188 47 224 188 0 42 chr10 106047367 106047415 -39541873 + L2 LINE L2 3223 3268 -4 258 336 10 0 chr10 106047455 106047559 -39541729 + MIR SINE MIR 57 161 -101 509 277 114 0 chr10 106047559 106047743 -39541545 - MIR SINE MIR -10 252 48 1804 215 151 0 chr10 106047821 106048286 -39541002 - L1ME3 LINE L1 -92 6070 5536 183 220 0 0 chr10 106048601 106048651 -39540637 + (CA)n Simple_repeat Simple_repeat 1 50 0 195 238 16 0 chr10 106049274 106049337 -39539951 - L2 LINE L2 -655 2659 2596 208 299 6 40 chr10 106049410 106049587 -39539701 + GA-rich Low_complexity Low_complexity 5 175 0 378 170 126 52 chr10 106051409 106051544 -39537744 - Charlie7 DNA MER1_type -2454 158 14 557 286 25 20 chr10 106051627 106051823 -39537465 + MER117 DNA MER1_type 1 197 0 347 263 122 25 chr10 106051881 106052088 -39537200 - MIR SINE MIR 0 262 37 448 156 13 0 chr10 106052592 106052669 -39536619 + L2 LINE L2 3236 3313 0 1971 173 92 5 chr10 106052801 106053194 -39536094 + MSTA LTR MaLR 1 427 -1 211 318 45 27 chr10 106053388 106053498 -39535790 - MIR SINE MIR -131 131 20 621 264 0 0 chr10 106053857 106053997 -39535291 - MIR SINE MIR -100 162 23 286 253 25 0 chr10 106054004 106054083 -39535205 - MIR SINE MIR -88 174 94 258 226 16 0 chr10 106054464 106054526 -39534762 + L2 LINE L2 3238 3300 -13 243 0 0 0 chr10 106054526 106054553 -39534735 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 258 289 61 18 chr10 106054635 106054749 -39534539 + MIR3 SINE MIR 36 154 -54 345 308 26 67 chr10 106055944 106056139 -39533149 - L2 LINE L2 -213 3059 2873 2471 207 86 0 chr10 106056157 106056679 -39532609 + MLT1F1 LTR MaLR 1 567 0 315 309 10 0 chr10 106056759 106056856 -39532432 + MIR3 SINE MIR 91 188 -20 1941 157 12 6 chr10 106056881 106057212 -39532076 + MLT1A1 LTR MaLR 1 333 -32 1228 183 52 8 chr10 106057212 106057464 -39531824 - AluJo SINE Alu -11 301 39 255 128 0 0 chr10 106057464 106057503 -39531785 + MLT1A1 LTR MaLR 327 365 0 221 236 0 0 chr10 106057824 106057879 -39531409 - MIR SINE MIR -60 202 148 1656 178 6 19 chr10 106058541 106058856 -39530432 - AluJo SINE Alu -1 311 1 320 345 115 8 chr10 106059131 106059366 -39529922 + MIR SINE MIR 2 261 -1 432 215 119 42 chr10 106060081 106060248 -39529040 + MIR SINE MIR 5 181 -62 249 278 75 59 chr10 106060267 106060454 -39528834 + L2 LINE L2 2883 3072 -241 198 239 0 0 chr10 106060611 106060657 -39528631 + L2 LINE L2 3226 3271 -1 204 304 43 0 chr10 106061639 106061708 -39527580 + MIR SINE MIR 86 157 -105 308 238 88 12 chr10 106062090 106062170 -39527118 + MER5A DNA MER1_type 26 111 -78 1520 184 14 17 chr10 106063380 106063674 -39525614 + AluJo SINE Alu 3 295 -17 221 135 0 0 chr10 106063948 106063985 -39525303 + MIR SINE MIR 109 145 -63 1584 176 13 22 chr10 106064221 106064533 -39524755 + AluJo SINE Alu 3 311 -1 214 222 0 0 chr10 106064634 106064679 -39524609 - L2 LINE L2 -2 3270 3226 586 240 16 11 chr10 106065397 106065550 -39523738 + MIR SINE MIR 6 154 -61 1022 188 47 51 chr10 106065571 106065847 -39523441 + L1ME3A LINE L1 5896 6170 0 243 88 0 0 chr10 106068697 106068731 -39520557 + (TGG)n Simple_repeat Simple_repeat 3 36 0 338 155 48 257 chr10 106068731 106068814 -39520474 - MIR SINE MIR -9 253 154 2204 78 3 0 chr10 106068814 106069128 -39520160 - AluY SINE Alu 0 315 1 338 155 48 257 chr10 106069128 106069169 -39520119 - MIR SINE MIR -108 154 106 781 179 0 8 chr10 106069169 106069303 -39519985 + L1MC1 LINE L1 6195 6327 -6 1555 168 26 26 chr10 106069304 106069487 -39519801 - AluJo SINE Alu -9 303 118 207 0 0 0 chr10 106069487 106069510 -39519778 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1555 168 26 26 chr10 106069510 106069629 -39519659 - AluJo SINE Alu -193 119 1 338 155 48 257 chr10 106069629 106069706 -39519582 - MIR SINE MIR -155 107 91 213 218 0 18 chr10 106070778 106070833 -39518455 + MIR SINE MIR 103 156 -106 1933 137 0 3 chr10 106070876 106071222 -39518066 - AluSx SINE Alu 0 345 1 2382 91 0 0 chr10 106071230 106071539 -39517749 - AluY SINE Alu -1 310 2 2264 100 0 0 chr10 106071704 106072003 -39517285 - AluSg SINE Alu -11 299 1 4959 153 39 18 chr10 106072243 106072605 -39516683 + L1MC1 LINE L1 5460 5813 -520 2117 104 0 38 chr10 106072605 106072921 -39516367 + AluSx SINE Alu 1 304 -8 4959 153 39 18 chr10 106072921 106073412 -39515876 + L1MC1 LINE L1 5813 6331 -2 960 172 24 0 chr10 106074361 106074530 -39514758 - MER5B DNA MER1_type -1 177 5 845 246 27 18 chr10 106076132 106076352 -39512936 + MIR SINE MIR 10 231 -31 344 297 186 17 chr10 106076460 106076939 -39512349 - L2 LINE L2 -110 3203 2637 942 228 38 87 chr10 106077595 106077964 -39511324 + LTR37B LTR ERV1 116 466 -2 269 337 11 0 chr10 106077976 106078071 -39511217 - MIR SINE MIR -62 146 51 290 303 8 41 chr10 106078120 106078242 -39511046 - MIR3 SINE MIR -25 183 66 384 246 56 24 chr10 106078873 106078999 -39510289 + L2 LINE L2 3182 3311 -2 802 264 58 21 chr10 106079092 106079334 -39509954 - MIR SINE MIR -3 259 9 1063 208 122 98 chr10 106079530 106080029 -39509259 + MLT1J LTR MaLR 1 511 0 882 204 42 47 chr10 106080506 106080697 -39508591 - MER91B DNA MER1_type 0 190 1 2085 136 3 0 chr10 106081279 106081589 -39507699 + AluSq SINE Alu 1 311 -2 194 348 85 8 chr10 106082014 106082132 -39507156 + MIR3 SINE MIR 45 171 -37 215 192 206 0 chr10 106082188 106082261 -39507027 - MER5A DNA MER1_type -93 96 9 180 74 0 0 chr10 106083941 106083968 -39505320 + L2 LINE L2 3030 3056 -216 184 369 19 38 chr10 106086009 106086217 -39503071 - MIR SINE MIR -28 234 34 1046 176 22 0 chr10 106086440 106086622 -39502666 + MSTB LTR MaLR 241 426 0 707 93 20 8 chr10 106086631 106086748 -39502540 - MSTB LTR MaLR -238 117 1 447 254 139 6 chr10 106087406 106087571 -39501717 - MIR SINE MIR -31 231 45 2641 167 52 145 chr10 106087944 106088194 -39501094 - L1MB7 LINE L1 -5 6179 5907 1731 158 16 10 chr10 106088194 106088504 -39500784 + AluJo SINE Alu 1 312 0 2641 167 52 145 chr10 106088504 106088758 -39500530 - L1MB7 LINE L1 -277 5907 5780 2305 88 0 10 chr10 106088758 106089066 -39500222 - AluSg1 SINE Alu -3 306 2 2641 167 52 145 chr10 106089066 106089428 -39499860 - L1MB7 LINE L1 -404 5780 5386 1236 109 17 0 chr10 106089985 106090159 -39499129 + AluSg/x SINE Alu 119 295 -15 364 237 11 21 chr10 106090199 106090292 -39498996 + MER97c DNA MER1_type? 88 179 -911 331 294 42 8 chr10 106090939 106091058 -39498230 - MIR3 SINE MIR -12 196 74 342 219 73 0 chr10 106091504 106091600 -39497688 + MER5A DNA MER1_type 7 109 -80 2255 127 3 9 chr10 106091653 106091968 -39497320 + AluSq SINE Alu 1 313 0 216 274 119 0 chr10 106092143 106092227 -39497061 + L3 LINE CR1 865 958 -619 184 303 92 9 chr10 106092272 106092381 -39496907 + MIR SINE MIR 18 135 -73 288 213 88 0 chr10 106093341 106093421 -39495867 + MIR SINE MIR 69 155 -107 857 255 186 23 chr10 106093457 106093920 -39495368 - L2 LINE L2 -2 3311 2721 231 324 15 0 chr10 106093934 106094002 -39495286 + MIR SINE MIR 194 262 0 402 21 0 0 chr10 106095898 106095945 -39493343 + (TGAA)n Simple_repeat Simple_repeat 2 48 0 230 229 60 96 chr10 106096061 106096144 -39493144 - MIR SINE MIR -60 202 123 489 270 58 0 chr10 106097739 106097876 -39491412 + MIR SINE MIR 14 158 -104 2255 128 3 0 chr10 106098123 106098429 -39490859 + AluSc SINE Alu 1 307 -2 387 175 27 169 chr10 106098494 106098579 -39490709 + MIR SINE MIR 93 140 -122 828 125 0 29 chr10 106098579 106098715 -39490573 + FLAM_C SINE Alu 2 133 0 387 175 27 169 chr10 106098715 106098812 -39490476 + MIR SINE MIR 140 249 -13 605 275 99 61 chr10 106099766 106100141 -39489147 + L1ME3A LINE L1 5567 5955 -215 2246 104 44 0 chr10 106100432 106100729 -39488559 + AluSx SINE Alu 1 310 -2 220 333 148 12 chr10 106100843 106101005 -39488283 - MIR SINE MIR 0 262 79 224 362 95 12 chr10 106101413 106101721 -39487567 + L2 LINE L2 2717 3046 -226 445 287 63 0 chr10 106102019 106102162 -39487126 - MIR SINE MIR -37 225 74 1874 170 27 0 chr10 106102203 106102503 -39486785 - AluJb SINE Alu -2 310 3 21 36 0 0 chr10 106102652 106102680 -39486608 + AT_rich Low_complexity Low_complexity 1 28 0 2042 123 47 10 chr10 106102748 106103049 -39486239 - AluSq SINE Alu -1 312 1 2208 84 10 24 chr10 106103056 106103354 -39485934 - AluSp SINE Alu -6 307 14 1544 189 23 33 chr10 106103884 106104186 -39485102 + AluJb SINE Alu 1 299 -13 634 231 14 7 chr10 106104311 106104458 -39484830 + MIR SINE MIR 71 218 -44 190 151 377 19 chr10 106104518 106104571 -39484717 + L2 LINE L2 3182 3253 -19 183 282 200 77 chr10 106104629 106104969 -39484319 - L3 LINE CR1 -20 1557 1176 517 269 73 20 chr10 106105474 106105714 -39483574 + MIR SINE MIR 4 261 -1 217 132 19 19 chr10 106105719 106105772 -39483516 + GA-rich Low_complexity Low_complexity 3 55 0 310 306 31 0 chr10 106107530 106107628 -39481660 - MER5A DNA MER1_type -30 159 59 248 294 64 37 chr10 106107539 106107648 -39481640 + MER5A DNA MER1_type 50 161 -28 * 331 308 40 6 chr10 106107785 106107942 -39481346 - MIR SINE MIR -63 145 34 822 225 19 29 chr10 106108318 106108527 -39480761 + MIR SINE MIR 51 257 -5 462 36 0 0 chr10 106109539 106109595 -39479693 + (TA)n Simple_repeat Simple_repeat 1 56 0 470 310 76 0 chr10 106109649 106109833 -39479455 - MIR SINE MIR -18 244 47 312 262 39 19 chr10 106110294 106110397 -39478891 + MIR SINE MIR 155 259 -3 228 269 13 26 chr10 106110497 106110575 -39478713 + MIR SINE MIR 186 262 0 633 264 39 6 chr10 106111071 106111253 -39478035 - MIR SINE MIR -28 234 47 576 289 45 26 chr10 106111509 106111740 -39477548 - MIR SINE MIR -13 249 15 388 279 169 30 chr10 106111929 106112166 -39477122 - L2 LINE L2 -2 3270 3001 365 269 0 19 chr10 106112698 106112802 -39476486 - MIR SINE MIR -85 177 76 2200 107 0 10 chr10 106113148 106113439 -39475849 + AluSx SINE Alu 10 297 -15 422 292 9 9 chr10 106114401 106114514 -39474774 + MIR SINE MIR 19 131 -77 793 297 68 25 chr10 106114515 106114956 -39474332 + L1MC1 LINE L1 5295 5754 -2054 1473 129 9 5 chr10 106114981 106115198 -39474090 + AluJb SINE Alu 87 304 -8 2379 97 7 0 chr10 106115201 106115510 -39473778 + AluSx SINE Alu 1 311 -1 197 255 0 21 chr10 106116325 106116372 -39472916 + L2 LINE L2 3227 3272 0 2364 55 31 21 chr10 106116653 106116944 -39472344 + AluY SINE Alu 1 294 -17 463 284 55 27 chr10 106117381 106117564 -39471724 + MIR3 SINE MIR 21 208 0 589 300 39 39 chr10 106118617 106118765 -39470523 + MIR SINE MIR 3 153 -109 1965 128 64 0 chr10 106118765 106119046 -39470242 + AluSx SINE Alu 1 299 -13 589 300 39 39 chr10 106119046 106119157 -39470131 + MIR SINE MIR 152 262 0 2380 149 22 0 chr10 106119841 106120244 -39469044 + L1MB3 LINE L1 5578 5989 -194 1034 223 5 0 chr10 106120244 106120450 -39468838 + MIR SINE MIR 30 236 -26 502 292 128 13 chr10 106121400 106121626 -39467662 - MIR SINE MIR 0 262 11 2456 122 26 74 chr10 106122705 106122914 -39466374 + L1MB2 LINE L1 5694 5911 -260 813 102 8 0 chr10 106122914 106123032 -39466256 + FLAM_C SINE Alu 1 119 -14 2456 122 26 74 chr10 106123032 106123321 -39465967 + L1MB2 LINE L1 5911 6168 -3 878 185 97 19 chr10 106125770 106125986 -39463302 + L1MC1 LINE L1 6096 6328 -5 472 289 7 0 chr10 106125990 106126125 -39463163 + MER69 DNA AcHobo 4 139 -1087 186 103 0 0 chr10 106126162 106126191 -39463097 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 26 30 0 0 chr10 106126771 106126804 -39462484 + AT_rich Low_complexity Low_complexity 1 33 0 1410 158 5 5 chr10 106127174 106127450 -39461838 - AluJb SINE Alu 0 359 84 409 313 115 10 chr10 106127455 106127663 -39461625 - MIR SINE MIR -10 252 23 973 187 6 0 chr10 106127687 106127853 -39461435 - MER8 DNA MER2_type 0 239 73 772 318 107 36 chr10 106130788 106131284 -39458004 - L3 LINE CR1 -87 1490 1030 1167 109 0 0 chr10 106131284 106131458 -39457830 + (TATTG)n Simple_repeat Simple_repeat 4 177 0 1558 165 7 41 chr10 106131460 106131751 -39457537 - AluJo SINE Alu -31 281 1 772 318 107 36 chr10 106131751 106131832 -39457456 - L3 LINE CR1 -547 1030 869 4672 165 39 20 chr10 106131836 106133279 -39456009 + L1MB2 LINE L1 4696 6170 -1 2366 95 0 0 chr10 106133565 106133859 -39455429 + AluSx SINE Alu 1 294 -18 386 158 24 49 chr10 106134543 106134625 -39454663 - MIR SINE MIR -111 151 72 1797 120 93 0 chr10 106134772 106135064 -39454224 - AluSg SINE Alu 0 316 1 1957 202 34 11 chr10 106136656 106137101 -39452187 + L1MB4 LINE L1 5726 6180 0 555 293 77 27 chr10 106137676 106137898 -39451390 + MIR SINE MIR 4 236 -26 2149 143 0 3 chr10 106137937 106138237 -39451051 - AluJo SINE Alu -13 299 1 24 32 0 0 chr10 106138366 106138397 -39450891 + AT_rich Low_complexity Low_complexity 1 31 0 181 265 71 31 chr10 106139224 106139322 -39449966 - MER5B DNA MER1_type -39 139 38 * 367 289 25 33 chr10 106139237 106139358 -39449930 + MER5A DNA MER1_type 65 184 -5 268 230 40 14 chr10 106139384 106139458 -39449830 + MIR SINE MIR 32 107 -155 306 325 86 0 chr10 106139505 106139656 -39449632 - MER103 DNA DNA 0 166 3 236 286 8 95 chr10 106140770 106140896 -39448392 + L2 LINE L2 3155 3269 -3 244 316 50 0 chr10 106140941 106141080 -39448208 + (TAGG)n Simple_repeat Simple_repeat 2 147 0 * 465 249 40 28 chr10 106141017 106141262 -39448026 + (TGGG)n Simple_repeat Simple_repeat 1 247 0 375 292 80 0 chr10 106141337 106141474 -39447814 + MIR SINE MIR 89 236 -26 263 264 88 68 chr10 106142101 106142249 -39447039 - MIR SINE MIR -8 254 104 631 283 201 42 chr10 106142334 106142787 -39446501 - L1ME4a LINE L1 -5 6116 5592 252 361 55 4 chr10 106142795 106142906 -39446382 + MIR SINE MIR 39 133 -75 1895 157 3 0 chr10 106145953 106146252 -39443036 + AluJo SINE Alu 1 300 -12 594 315 125 4 chr10 106146649 106146881 -39442407 + L3 LINE CR1 1298 1557 -20 267 269 118 58 chr10 106147609 106147730 -39441558 + MIR SINE MIR 21 147 -62 2490 68 0 0 chr10 106148038 106148349 -39440939 + AluSx SINE Alu 1 311 -1 1053 153 28 0 chr10 106148374 106148551 -39440737 + AluSg/x SINE Alu 117 298 -14 757 186 38 82 chr10 106148561 106148744 -39440544 + AluJo SINE Alu 13 187 -125 276 146 0 0 chr10 106148744 106148785 -39440503 - MER2 DNA MER2_type -304 41 1 215 293 13 13 chr10 106149328 106149403 -39439885 - MIR SINE MIR 0 262 188 256 290 57 40 chr10 106149592 106149716 -39439572 - MIR SINE MIR -63 145 20 1984 112 0 14 chr10 106150364 106150684 -39438604 - AluSx SINE Alu 0 316 1 2351 64 0 3 chr10 106151154 106151449 -39437839 + AluSq SINE Alu 1 294 -19 549 236 147 11 chr10 106151472 106151663 -39437625 + MIR SINE MIR 18 234 -28 490 249 202 28 chr10 106151674 106151927 -39437361 - L1ME4a LINE L1 -9 6112 5816 434 260 89 41 chr10 106151952 106151987 -39437301 - L1ME4a LINE L1 -384 5737 5705 2139 108 0 10 chr10 106151987 106152292 -39436996 + AluSx SINE Alu 1 302 -10 434 260 89 41 chr10 106152292 106152425 -39436863 - L1ME4a LINE L1 -416 5705 5561 290 206 48 0 chr10 106154898 106154961 -39434327 + MIR SINE MIR 108 173 -89 2215 100 3 7 chr10 106155891 106156201 -39433087 + AluSq SINE Alu 1 309 -4 246 62 0 0 chr10 106156217 106156249 -39433039 + (GA)n Simple_repeat Simple_repeat 1 32 0 316 309 27 9 chr10 106156249 106156359 -39432929 + L1M4 LINE L1 3073 3184 -2962 419 306 88 6 chr10 106156469 106156639 -39432649 - MIR SINE MIR -78 184 1 2738 85 25 3 chr10 106157329 106157694 -39431594 + THE1C LTR MaLR 1 373 -2 247 303 18 28 chr10 106157763 106157872 -39431416 + HAL1b LINE L1 1237 1344 -4 234 289 81 6 chr10 106157940 106158113 -39431175 - L1ME4a LINE L1 -14 6107 5922 216 328 0 0 chr10 106158115 106158182 -39431106 - L2 LINE L2 -20 3252 3186 245 276 10 41 chr10 106158443 106158541 -39430747 - MIR SINE MIR -56 206 112 574 323 30 9 chr10 106159389 106159621 -39429667 - MIR SINE MIR -7 255 19 1018 276 0 4 chr10 106159825 106160057 -39429231 + MIR SINE MIR 12 242 -20 533 289 58 52 chr10 106160986 106161211 -39428077 + L2 LINE L2 2560 2789 -525 2144 108 3 0 chr10 106161211 106161506 -39427782 + AluSx SINE Alu 1 296 -16 533 289 58 52 chr10 106161506 106161623 -39427665 + L2 LINE L2 2789 2904 -410 1961 131 0 10 chr10 106161979 106162276 -39427012 - AluSx SINE Alu -18 294 1 395 286 40 24 chr10 106162323 106162449 -39426839 + L2 LINE L2 3185 3312 -1 1290 191 97 17 chr10 106162564 106162852 -39426436 + AluJo SINE Alu 1 311 -1 208 47 23 70 chr10 106162861 106162904 -39426384 + (GA)n Simple_repeat Simple_repeat 1 41 0 277 325 56 8 chr10 106163199 106163325 -39425963 - MIR SINE MIR -29 233 102 795 113 0 0 chr10 106163421 106163527 -39425761 - AluJb SINE Alu -10 302 197 423 245 0 20 chr10 106164136 106164234 -39425054 + L2 LINE L2 3201 3296 -17 203 216 0 0 chr10 106164202 106164239 -39425049 + MIR SINE MIR 220 256 -6 * 425 312 53 24 chr10 106164607 106164777 -39424511 - MIR SINE MIR -68 194 20 25 0 0 0 chr10 106164777 106164802 -39424486 + AT_rich Low_complexity Low_complexity 1 25 0 3855 146 54 30 chr10 106164803 106165509 -39423779 - L1MB2 LINE L1 -2 6169 5447 495 280 50 28 chr10 106166013 106166201 -39423087 + MIR SINE MIR 13 208 -54 256 317 42 35 chr10 106166925 106167067 -39422221 + MER5A DNA MER1_type 47 189 0 644 183 76 0 chr10 106167406 106167537 -39421751 - MLT1D LTR MaLR 0 505 365 421 148 0 12 chr10 106167537 106167618 -39421670 + L1PA16 LINE L1 5751 5830 -336 * 2443 232 51 28 chr10 106167598 106167618 -39421670 + L1MC4 LINE L1 7068 7086 -956 2103 96 3 3 chr10 106167618 106167934 -39421354 + AluSq SINE Alu 1 316 0 2443 232 51 28 chr10 106167934 106168720 -39420568 + L1MC4 LINE L1 7086 7939 -103 24 77 0 0 chr10 106168781 106168833 -39420455 + AT_rich Low_complexity Low_complexity 1 52 0 404 116 14 0 chr10 106169162 106169231 -39420057 - L1MD3 LINE L1 -81 7914 7845 827 136 8 0 chr10 106169234 106169352 -39419936 + FLAM_A SINE Alu 4 122 -11 549 301 75 12 chr10 106169352 106169525 -39419763 - MIR SINE MIR -71 191 8 653 258 0 19 chr10 106170156 106170315 -39418973 - MIR SINE MIR 0 262 107 203 234 306 45 chr10 106170380 106170491 -39418797 + L2 LINE L2 3133 3272 0 * 321 222 28 18 chr10 106170481 106170576 -39418712 - MIR SINE MIR -75 133 28 233 265 73 0 chr10 106170918 106171028 -39418260 - MIR SINE MIR -36 226 106 950 122 0 7 chr10 106171483 106171622 -39417666 + FLAM_C SINE Alu 1 138 -5 887 108 0 8 chr10 106172775 106172904 -39416384 + FLAM_C SINE Alu 15 142 -1 192 319 111 56 chr10 106172951 106173239 -39416049 + L2 LINE L2 2928 3231 -41 653 214 124 30 chr10 106173292 106173526 -39415762 - MIR SINE MIR 0 262 7 518 86 12 0 chr10 106173900 106173981 -39415307 + (CA)n Simple_repeat Simple_repeat 2 83 0 201 108 0 0 chr10 106174486 106174523 -39414765 + (CA)n Simple_repeat Simple_repeat 2 38 0 197 83 28 0 chr10 106175918 106175954 -39413334 + (CA)n Simple_repeat Simple_repeat 1 37 0 342 0 0 0 chr10 106176189 106176227 -39413061 + (CA)n Simple_repeat Simple_repeat 2 39 0 424 351 66 54 chr10 106178791 106179233 -39410055 - L2 LINE L2 -7 3265 2819 1024 183 0 0 chr10 106179455 106179635 -39409653 - AluJo SINE Alu -13 299 120 187 351 47 27 chr10 106179684 106179832 -39409456 - MER5A DNA MER1_type -35 154 4 271 312 80 0 chr10 106180021 106180146 -39409142 - MIR3 SINE MIR -13 195 61 215 269 0 0 chr10 106180552 106180604 -39408684 - L2 LINE L2 0 3272 3221 4031 243 43 44 chr10 106180621 106180923 -39408365 - L1MEc LINE L1 -5020 1376 1075 2046 120 7 0 chr10 106180923 106181214 -39408074 - AluSx SINE Alu -14 298 6 4031 243 43 44 chr10 106181214 106181456 -39407832 - L1MEc LINE L1 -5321 1075 834 1717 116 91 38 chr10 106181456 106181774 -39407514 - MER44D DNA MER2_type -2 607 3 4031 243 43 44 chr10 106181774 106182569 -39406719 - L1MEc LINE L1 -5562 834 37 275 283 197 0 chr10 106182696 106182848 -39406440 + L2 LINE L2 2871 3052 -261 209 259 54 0 chr10 106183052 106183218 -39406070 + (CACCAT)n Simple_repeat Simple_repeat 3 177 0 * 221 305 54 0 chr10 106183098 106183265 -39406023 + C-rich Low_complexity Low_complexity 1 176 0 312 243 231 46 chr10 106183382 106183555 -39405733 - MIR SINE MIR -5 257 53 210 267 17 17 chr10 106183568 106183628 -39405660 + MIR SINE MIR 153 212 -50 2054 142 0 0 chr10 106183633 106183944 -39405344 + AluJb SINE Alu 1 311 -1 2102 109 3 26 chr10 106183947 106184280 -39405008 + AluSq SINE Alu 1 313 0 439 250 141 16 chr10 106184650 106184778 -39404510 + L1ME4a LINE L1 5973 6116 -5 2146 112 0 3 chr10 106184937 106185242 -39404046 + AluSx SINE Alu 1 304 -8 1211 191 23 8 chr10 106185250 106185507 -39403781 + L1MB4 LINE L1 5920 6180 0 251 320 74 16 chr10 106185598 106185720 -39403568 - MIR SINE MIR -130 132 4 204 297 117 31 chr10 106185786 106185914 -39403374 - MIR SINE MIR -89 173 35 300 242 42 33 chr10 106186582 106186702 -39402586 - MIR3 SINE MIR -25 183 63 286 242 0 71 chr10 106186770 106186869 -39402419 + L2 LINE L2 3221 3312 -1 1835 161 13 0 chr10 106187709 106188007 -39401281 + AluJb SINE Alu 1 302 -10 255 241 0 0 chr10 106188289 106188372 -39400916 + (TA)n Simple_repeat Simple_repeat 2 84 0 1703 204 66 79 chr10 106188372 106188902 -39400386 + L1ME3 LINE L1 5639 6161 -1 233 316 37 66 chr10 106189682 106189708 -39399580 - MIR SINE MIR -59 149 124 2113 103 10 0 chr10 106189708 106189999 -39399289 + AluSx SINE Alu 1 294 -18 2099 129 0 3 chr10 106190002 106190312 -39398976 + AluSq SINE Alu 2 310 -3 233 316 37 66 chr10 106190312 106190417 -39398871 - MIR SINE MIR -86 122 18 281 192 50 71 chr10 106190439 106190538 -39398750 - HAL1 LINE L1 0 2507 2411 1498 169 4 8 chr10 106190561 106190827 -39398461 - AluJb SINE Alu 0 312 48 553 168 0 0 chr10 106190827 106190922 -39398366 + AluJ/FRAM SINE Alu 217 311 -1 565 192 67 122 chr10 106190974 106191229 -39398059 + L1MC5 LINE L1 7121 7361 -600 1074 149 26 10 chr10 106191229 106191423 -39397865 - Tigger1 DNA MER2_type 0 2418 2222 419 131 49 0 chr10 106191424 106191485 -39397803 + AluS SINE Alu 2 65 -248 496 308 19 13 chr10 106191508 106191664 -39397624 + L2 LINE L2 3116 3272 0 2190 101 49 0 chr10 106191846 106192134 -39397154 + AluSx SINE Alu 1 302 -10 1750 133 57 4 chr10 106192290 106192569 -39396719 - AluJb SINE Alu -23 289 1 282 241 9 54 chr10 106192683 106192795 -39396493 - L2 LINE L2 0 3272 3166 292 54 0 0 chr10 106192898 106192935 -39396353 - AluJb SINE Alu -177 125 89 403 181 32 21 chr10 106192935 106193029 -39396259 + L1MB2 LINE L1 6074 6168 -3 986 249 159 22 chr10 106193303 106193673 -39395615 + MLT1L LTR MaLR 186 606 -9 306 288 36 27 chr10 106193783 106193894 -39395394 - MIR SINE MIR -62 146 34 252 285 136 37 chr10 106194028 106194242 -39395046 - MLT1K LTR MaLR -158 430 196 384 224 63 42 chr10 106194243 106194386 -39394902 + MIR SINE MIR 52 197 -65 * 544 301 34 0 chr10 106194371 106194517 -39394771 - L2 LINE L2 0 3272 3122 497 241 17 0 chr10 106195679 106195795 -39393493 - L2 LINE L2 -33 3239 3122 1918 137 18 0 chr10 106195818 106196102 -39393186 + AluJb SINE Alu 1 289 -23 561 244 45 53 chr10 106196550 106196796 -39392492 - L1MC5 LINE L1 -58 7903 7660 237 214 179 27 chr10 106196810 106196922 -39392366 - L1ME LINE L1 -503 5618 5490 883 148 52 19 chr10 106197727 106197882 -39391406 + AluJb SINE Alu 136 295 -17 224 263 51 51 chr10 106197921 106198039 -39391249 - L2 LINE L2 -23 3290 3173 952 158 5 60 chr10 106198249 106198374 -39390914 - L1ME LINE L1 -750 5396 5286 1745 157 27 27 chr10 106198374 106198668 -39390620 + AluJo SINE Alu 1 294 -18 952 158 5 60 chr10 106198668 106198757 -39390531 - L1ME LINE L1 -860 5286 5194 2116 91 4 11 chr10 106198852 106199128 -39390160 + AluSx SINE Alu 1 274 -38 976 239 9 35 chr10 106199128 106199354 -39389934 - HERVL LTR ERVL -1173 4481 4262 348 250 44 37 chr10 106199555 106199691 -39389597 + MIR3 SINE MIR 5 141 -67 1507 214 39 46 chr10 106199761 106199804 -39389484 + MER97c DNA MER1_type? 25 67 -1023 2485 83 0 0 chr10 106199804 106200106 -39389182 + AluSx SINE Alu 1 302 -10 1507 214 39 46 chr10 106200106 106200474 -39388814 + MER97c DNA MER1_type? 67 433 -657 720 179 14 7 chr10 106200675 106200815 -39388473 + MER33 DNA MER1_type 37 177 -147 297 311 59 0 chr10 106200932 106201051 -39388237 + MIR SINE MIR 93 218 -44 608 234 105 0 chr10 106201463 106201634 -39387654 + MER5A DNA MER1_type 1 189 0 2545 68 0 3 chr10 106201654 106201964 -39387324 + AluY SINE Alu 2 310 -1 1753 182 0 3 chr10 106202209 106202505 -39386783 + AluJo SINE Alu 5 299 -13 2157 102 41 0 chr10 106202616 106202752 -39386536 + AluSx SINE Alu 3 132 -180 2067 87 11 0 chr10 106202752 106203016 -39386272 + AluSp SINE Alu 1 267 -46 2157 102 41 0 chr10 106203016 106203172 -39386116 + AluSx SINE Alu 132 307 -5 248 301 75 0 chr10 106203616 106203709 -39385579 - L2 LINE L2 -21 3251 3152 750 191 18 36 chr10 106203866 106204034 -39385254 + L1ME2 LINE L1 5943 6107 -57 2174 108 0 10 chr10 106204034 106204330 -39384958 + AluSx SINE Alu 1 293 -19 1363 178 48 7 chr10 106205278 106205571 -39383717 - MER33 DNA MER1_type -18 306 2 269 250 60 17 chr10 106206064 106206093 -39383195 + MIR SINE MIR 129 155 -107 1650 130 82 62 chr10 106206093 106206248 -39383040 + THE1C LTR MaLR 1 152 -223 2044 147 7 0 chr10 106206248 106206547 -39382741 - AluSx SINE Alu -11 301 1 1650 130 82 62 chr10 106206547 106206759 -39382529 + THE1C LTR MaLR 152 375 0 269 250 60 17 chr10 106206759 106206845 -39382443 + MIR SINE MIR 155 249 -13 407 61 197 0 chr10 106207274 106207340 -39381948 - MADE1 DNA Mariner -1 79 1 676 141 54 130 chr10 106207883 106208068 -39381220 + FAM SINE Alu 1 171 -4 1943 153 13 0 chr10 106208364 106208537 -39380751 - AluJb SINE Alu -8 304 124 351 0 0 0 chr10 106208537 106208576 -39380712 + (TG)n Simple_repeat Simple_repeat 2 40 0 1943 153 13 0 chr10 106208576 106208702 -39380586 - AluJb SINE Alu -188 124 1 225 94 0 0 chr10 106208790 106208822 -39380466 + (TG)n Simple_repeat Simple_repeat 2 33 0 180 0 0 0 chr10 106208822 106208842 -39380446 + (TA)n Simple_repeat Simple_repeat 2 21 0 2588 121 59 12 chr10 106208864 106209269 -39380019 + Tigger2a DNA MER2_type 11 434 0 279 79 0 0 chr10 106209619 106209657 -39379631 + (T)n Simple_repeat Simple_repeat 1 38 0 2202 108 23 13 chr10 106209883 106210218 -39379070 - AluSx SINE Alu 0 312 1 299 216 136 0 chr10 106210909 106210997 -39378291 - MIR SINE MIR -96 166 67 2083 138 0 0 chr10 106211002 106211300 -39377988 + AluJb SINE Alu 1 298 -14 1826 185 19 27 chr10 106211304 106211672 -39377616 + MLT1A1 LTR MaLR 1 365 0 225 250 17 17 chr10 106215207 106215267 -39374021 + GA-rich Low_complexity Low_complexity 2 61 0 428 263 127 35 chr10 106216198 106216426 -39372862 - MIR SINE MIR -2 260 12 211 328 0 0 chr10 106216674 106216738 -39372550 - L2 LINE L2 -217 3055 2992 1034 184 27 45 chr10 106216779 106217002 -39372286 + MER20 DNA MER1_type 1 219 0 207 314 17 68 chr10 106218274 106218392 -39370896 - MIR SINE MIR -65 197 86 284 290 60 10 chr10 106218771 106218871 -39370417 + L2 LINE L2 3204 3308 -5 2099 115 33 10 chr10 106220651 106220956 -39368332 + AluSx SINE Alu 1 312 0 5266 138 20 40 chr10 106221149 106222022 -39367266 - L1MB3 LINE L1 0 6183 5328 2460 94 0 0 chr10 106222022 106222330 -39366958 - AluY SINE Alu -3 308 1 5266 138 20 40 chr10 106222330 106222474 -39366814 - L1MB3 LINE L1 -855 5328 5183 1556 172 10 41 chr10 106222641 106222733 -39366555 + AluJo SINE Alu 4 97 -208 2199 103 7 3 chr10 106222733 106223024 -39366264 + AluSx SINE Alu 1 292 -20 1556 172 10 41 chr10 106223024 106223242 -39366046 + AluJo SINE Alu 97 305 0 203 246 0 0 chr10 106223339 106223379 -39365909 + A-rich Low_complexity Low_complexity 1 40 -17 2144 60 35 51 chr10 106223379 106223453 -39365835 + L1PA10 LINE L1 5859 5933 -235 2262 103 0 0 chr10 106223453 106223745 -39365543 + AluSx SINE Alu 1 292 -20 2144 60 35 51 chr10 106223745 106223852 -39365436 + L1PA10 LINE L1 5933 6040 -128 2171 127 0 7 chr10 106223852 106224159 -39365129 + AluSq SINE Alu 1 305 -8 2144 60 35 51 chr10 106224159 106224291 -39364997 + L1PA10 LINE L1 6040 6168 0 203 246 0 0 chr10 106224291 106224307 -39364981 + A-rich Low_complexity Low_complexity 39 57 0 288 279 13 0 chr10 106225408 106225487 -39363801 - MIR SINE MIR -109 153 74 2149 99 3 3 chr10 106225862 106226144 -39363144 - AluSx SINE Alu -30 282 1 245 275 33 22 chr10 106226401 106226492 -39362796 + L1ME LINE L1 5522 5613 -508 1153 93 66 44 chr10 106226511 106226693 -39362595 + AluJb SINE Alu 121 306 -6 549 198 56 56 chr10 106226694 106226850 -39362438 + L1MC5 LINE L1 7271 7429 -532 2011 157 3 0 chr10 106226850 106227150 -39362138 + AluJb SINE Alu 1 301 -11 549 198 56 56 chr10 106227150 106227190 -39362098 + L1MC5 LINE L1 7428 7467 -494 7230 116 35 45 chr10 106227201 106227456 -39361832 + Tigger3b DNA MER2_type 2 258 -2770 2226 135 0 0 chr10 106227456 106227768 -39361520 + AluSx SINE Alu 1 312 0 7230 116 35 45 chr10 106227768 106228076 -39361212 + Tigger3b DNA MER2_type 258 568 -2460 1657 146 13 52 chr10 106228076 106228385 -39360903 - AluJo SINE Alu -15 297 1 7230 116 35 45 chr10 106228385 106229062 -39360226 + Tigger3b DNA MER2_type 568 1230 -1 2339 70 3 35 chr10 106229080 106229394 -39359894 + AluSc SINE Alu 1 304 -5 378 0 0 0 chr10 106229416 106229458 -39359830 + (TG)n Simple_repeat Simple_repeat 2 43 0 396 183 114 53 chr10 106229458 106229589 -39359699 + L1MD3 LINE L1 7730 7868 -127 1584 180 42 42 chr10 106229751 106229853 -39359435 + L1MC4a LINE L1 5321 5422 -762 2370 87 3 3 chr10 106229853 106230164 -39359124 + AluY SINE Alu 1 311 0 1584 180 42 42 chr10 106230164 106230416 -39358872 + L1MC4a LINE L1 5421 5675 -509 942 117 0 35 chr10 106230416 106230561 -39358727 + FLAM_C SINE Alu 1 140 -3 336 314 88 5 chr10 106231482 106231676 -39357612 + L1MC4a LINE L1 5809 6018 -1790 687 169 57 0 chr10 106231676 106231800 -39357488 + FLAM_C SINE Alu 3 133 0 29 0 0 0 chr10 106231956 106231985 -39357303 + AT_rich Low_complexity Low_complexity 1 29 0 2259 93 4 0 chr10 106231989 106232292 -39356996 + AluSg SINE Alu 1 304 0 1640 171 18 7 chr10 106232442 106232717 -39356571 + AluJb SINE Alu 5 282 -30 1944 158 0 3 chr10 106233774 106234072 -39355216 + AluJb SINE Alu 1 297 -15 1823 157 10 10 chr10 106234824 106235118 -39354170 + AluJo SINE Alu 1 294 -18 2451 109 43 3 chr10 106236188 106236538 -39352750 - THE1B LTR MaLR 0 364 1 10428 99 50 17 chr10 106236538 106238067 -39351221 - THE1B-int LTR MaLR 0 1580 1 2729 93 3 6 chr10 106238067 106238432 -39350856 - THE1B LTR MaLR 0 364 1 202 274 16 48 chr10 106239761 106239885 -39349403 + T-rich Low_complexity Low_complexity 5 124 0 244 235 102 27 chr10 106240574 106240761 -39348527 + L1M4 LINE L1 4957 5157 -989 237 65 0 0 chr10 106240928 106240959 -39348329 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 348 270 74 8 chr10 106240965 106241211 -39348077 + L1P5 LINE L1 5171 5431 -723 532 194 0 0 chr10 106241288 106241381 -39347907 - AluSp/q SINE Alu -15 298 206 183 100 0 0 chr10 106241389 106241419 -39347869 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 1805 233 99 53 chr10 106241421 106241736 -39347552 - L1M4 LINE L1 -2196 3950 3651 1828 145 55 3 chr10 106241736 106242025 -39347263 - AluSx SINE Alu -8 304 1 1805 233 99 53 chr10 106242025 106242440 -39346848 - L1M4 LINE L1 -2495 3651 3257 2638 46 0 0 chr10 106242440 106242744 -39346544 - AluY SINE Alu -7 304 1 1805 233 99 53 chr10 106242744 106242766 -39346522 - L1M4 LINE L1 -2889 3257 3237 2220 136 0 0 chr10 106242766 106243067 -39346221 - AluSx SINE Alu -11 301 1 1805 233 99 53 chr10 106243067 106243088 -39346200 - L1M4 LINE L1 -2909 3237 3139 2179 138 0 0 chr10 106243089 106243393 -39345895 - AluSx SINE Alu -8 304 1 442 219 164 25 chr10 106243415 106243560 -39345728 + L1ME3A LINE L1 5724 5906 -264 309 68 0 0 chr10 106243560 106243604 -39345684 + (CA)n Simple_repeat Simple_repeat 1 44 0 442 219 164 25 chr10 106243604 106243659 -39345629 + L1ME3A LINE L1 5906 5952 -218 2338 92 0 3 chr10 106243788 106244082 -39345206 + AluSg SINE Alu 1 293 -17 246 218 58 23 chr10 106244148 106244235 -39345053 + L1MC4 LINE L1 7927 8016 -26 180 0 0 0 chr10 106246565 106246585 -39342703 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1486 183 22 11 chr10 106246590 106246863 -39342425 - AluJo SINE Alu -36 276 1 2172 127 0 13 chr10 106247198 106247514 -39341774 + AluSx SINE Alu 1 312 0 1429 183 33 29 chr10 106247650 106247956 -39341332 - AluJo SINE Alu -5 307 1 1478 194 0 67 chr10 106248174 106248488 -39340800 + AluJb SINE Alu 1 293 -19 1125 283 128 39 chr10 106249074 106249611 -39339677 + MLT1K LTR MaLR 2 586 -2 570 219 101 73 chr10 106249684 106249903 -39339385 + LTR41 LTR ERVL 517 741 -32 2368 99 3 0 chr10 106249903 106250215 -39339073 - AluSp SINE Alu 0 313 1 268 111 333 0 chr10 106250216 106250279 -39339009 + L1MD3 LINE L1 7834 7917 -78 243 206 58 130 chr10 106250465 106250578 -39338710 + L1ME4a LINE L1 5711 5802 -319 1992 148 3 0 chr10 106250578 106250869 -39338419 + AluSx SINE Alu 1 292 -20 243 206 58 130 chr10 106250869 106250978 -39338310 + L1ME4a LINE L1 5802 5917 -204 629 196 52 29 chr10 106251031 106251204 -39338084 + L1ME4a LINE L1 5945 6121 0 1953 94 0 16 chr10 106251247 106251502 -39337786 + AluSx SINE Alu 1 251 -61 366 145 3 0 chr10 106251546 106251614 -39337674 + Alu SINE Alu 242 295 -5 2162 119 7 0 chr10 106251641 106251934 -39337354 + AluSx SINE Alu 1 295 -17 2367 87 0 6 chr10 106251936 106252273 -39337015 + AluY SINE Alu 1 311 0 2588 65 0 25 chr10 106252531 106252714 -39336574 - AluSp SINE Alu 0 313 127 216 0 0 0 chr10 106252714 106252738 -39336550 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2230 108 0 3 chr10 106252738 106253024 -39336264 - AluSp SINE Alu -28 285 1 2588 65 0 25 chr10 106253024 106253160 -39336128 - AluSp SINE Alu -184 129 1 186 320 117 0 chr10 106253754 106253857 -39335431 - MIR SINE MIR -43 219 105 213 281 104 85 chr10 106254645 106254809 -39334479 - MIR SINE MIR -60 202 36 488 139 59 10 chr10 106255110 106255211 -39334077 - MER50 LTR ERV1 -130 604 499 1848 174 0 3 chr10 106255216 106255515 -39333773 - AluSx SINE Alu -12 300 3 847 160 0 0 chr10 106256224 106256349 -39332939 - AluSq/x SINE Alu -187 125 1 1721 120 113 4 chr10 106256386 106256660 -39332628 + AluJb SINE Alu 1 304 -8 616 185 141 22 chr10 106256978 106257113 -39332175 - FRAM SINE Alu -21 155 5 1796 136 3 21 chr10 106257779 106257899 -39331389 + AluJo SINE Alu 19 140 -172 2335 88 7 7 chr10 106257899 106258204 -39331084 + AluSq SINE Alu 1 305 -8 1796 136 3 21 chr10 106258204 106258370 -39330918 + AluJo SINE Alu 140 300 -12 456 261 96 14 chr10 106258411 106258693 -39330595 + L1ME LINE L1 5521 5829 -312 220 185 15 31 chr10 106258700 106258765 -39330523 + GA-rich Low_complexity Low_complexity 5 68 0 452 258 98 36 chr10 106258768 106258962 -39330326 + L1MC4a LINE L1 5815 6020 -1788 1555 91 5 0 chr10 106259009 106259206 -39330082 - AluSg/x SINE Alu -12 298 101 1742 128 23 0 chr10 106259206 106259472 -39329816 + AluJb SINE Alu 30 301 -11 804 310 141 8 chr10 106259491 106259859 -39329429 + L1MC4a LINE L1 6499 6915 -893 189 0 0 0 chr10 106259860 106259881 -39329407 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 1240 146 5 5 chr10 106259881 106260073 -39329215 - AluJb SINE Alu -32 280 89 1098 245 128 101 chr10 106260102 106260838 -39328450 + L1MC4 LINE L1 7026 7797 -245 2359 59 48 0 chr10 106260838 106261127 -39328161 - AluY SINE Alu -8 303 1 1098 245 128 101 chr10 106261127 106261378 -39327910 + L1MC4 LINE L1 7797 8040 -2 2251 95 27 0 chr10 106261424 106261720 -39327568 - AluSx SINE Alu -8 304 1 1042 148 112 0 chr10 106262260 106262429 -39326859 + AluJo SINE Alu 96 283 -29 4935 101 18 72 chr10 106262429 106262447 -39326841 + L1MA4A LINE L1 5476 5493 -810 2570 58 3 7 chr10 106262447 106262755 -39326533 + AluY SINE Alu 3 309 -2 4935 101 18 72 chr10 106262755 106263211 -39326077 + L1MA4A LINE L1 5493 5884 -419 2015 125 38 3 chr10 106263211 106263500 -39325788 + AluSq SINE Alu 1 299 -14 4935 101 18 72 chr10 106263500 106263893 -39325395 + L1MA4A LINE L1 5884 6297 -6 586 99 33 11 chr10 106263900 106263991 -39325297 + Tigger7 DNA MER2_type 433 525 -208 580 170 0 21 chr10 106263985 106264079 -39325209 + Tigger7 DNA MER2_type 2400 2491 0 * 3274 209 24 42 chr10 106264079 106264921 -39324367 + L1MB3 LINE L1 4450 5276 -870 2567 142 21 2 chr10 106264921 106265350 -39323938 + L1MB3 LINE L1 5746 6182 -1 335 196 0 0 chr10 106265350 106265406 -39323882 + MLT1-int LTR MaLR 551 606 -765 1835 134 14 7 chr10 106265413 106265690 -39323598 + AluJb SINE Alu 13 291 -21 464 307 28 11 chr10 106265909 106266085 -39323203 + MLT1-int LTR MaLR 699 877 -494 2406 61 0 0 chr10 106266946 106267257 -39322031 + AluY SINE Alu 3 313 0 1820 138 0 58 chr10 106267387 106267698 -39321590 - AluJo SINE Alu -8 304 12 233 212 12 106 chr10 106267987 106268028 -39321260 - MIR SINE MIR -78 184 153 1270 136 5 23 chr10 106268028 106268242 -39321046 + MER6B DNA MER2_type 1 210 0 233 212 12 106 chr10 106268242 106268285 -39321003 - MIR SINE MIR -109 153 108 2032 127 0 27 chr10 106268347 106268647 -39320641 + AluSx SINE Alu 1 292 -20 487 198 0 0 chr10 106268798 106268884 -39320404 + AluJ/FRAM SINE Alu 216 301 -11 1756 140 0 7 chr10 106269932 106270239 -39319049 - AluY SINE Alu 0 316 12 935 183 12 0 chr10 106270364 106270533 -39318755 + AluSg/x SINE Alu 126 296 -16 779 167 8 15 chr10 106270680 106270812 -39318476 + FLAM_C SINE Alu 3 133 0 1130 165 11 0 chr10 106270887 106271069 -39318219 - FRAM SINE Alu 0 176 1 2155 130 0 0 chr10 106271076 106271377 -39317911 - AluSx SINE Alu 0 312 12 1653 183 7 4 chr10 106271485 106271764 -39317524 - AluJb SINE Alu -24 288 9 2325 107 0 3 chr10 106271821 106272130 -39317158 - AluSx SINE Alu -4 308 1 953 192 23 6 chr10 106272297 106272469 -39316819 - FRAM SINE Alu -8 168 1 2338 99 6 3 chr10 106272473 106272785 -39316503 - AluSq SINE Alu 0 313 1 2178 118 0 0 chr10 106273275 106273563 -39315725 + AluSx SINE Alu 1 288 -24 1658 173 22 29 chr10 106273902 106274215 -39315073 - AluJb SINE Alu 0 312 2 1818 179 0 3 chr10 106274425 106274716 -39314572 + AluJo SINE Alu 1 290 -22 21 36 0 0 chr10 106274718 106274746 -39314542 + AT_rich Low_complexity Low_complexity 1 28 0 2322 81 3 0 chr10 106274746 106275051 -39314237 + AluSp SINE Alu 1 306 0 2296 102 0 16 chr10 106275265 106275579 -39313709 + AluSc SINE Alu 1 309 0 2359 91 0 10 chr10 106275775 106276082 -39313206 - AluY SINE Alu -7 304 1 2094 121 7 3 chr10 106276082 106276379 -39312909 - AluSx SINE Alu -13 299 1 1743 146 9 61 chr10 106276519 106276848 -39312440 + AluJb SINE Alu 1 312 0 3895 72 2 51 chr10 106277057 106277609 -39311679 + LTR17 LTR ERV1 256 780 0 2278 49 0 0 chr10 106277639 106277905 -39311383 + HERV17 LTR ERV1 8361 8626 0 2503 46 28 31 chr10 106277905 106278230 -39311058 + LTR17 LTR ERV1 1 324 -456 185 0 0 39 chr10 106278230 106278256 -39311032 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 1901 101 98 0 chr10 106278283 106278559 -39310729 - AluSx SINE Alu -9 303 1 344 283 82 19 chr10 106278970 106279129 -39310159 - MIR SINE MIR -26 236 68 515 143 0 0 chr10 106279992 106280083 -39309205 + L1PA16 LINE L1 6072 6162 -4 25 31 0 0 chr10 106280083 106280115 -39309173 + AT_rich Low_complexity Low_complexity 1 32 0 29 60 0 0 chr10 106280225 106280275 -39309013 + AT_rich Low_complexity Low_complexity 1 50 0 922 134 15 0 chr10 106280275 106280409 -39308879 - AluJb SINE Alu -176 136 1 360 133 0 0 chr10 106280605 106280665 -39308623 - AluJb SINE Alu 0 302 243 424 169 0 0 chr10 106280676 106280747 -39308541 - AluJb SINE Alu -157 155 85 349 274 196 45 chr10 106281132 106281464 -39307824 + L2 LINE L2 2923 3304 -9 855 221 0 0 chr10 106281569 106281732 -39307556 + FRAM SINE Alu 1 163 -13 1953 161 7 0 chr10 106281774 106282073 -39307215 - AluSx SINE Alu -11 301 1 659 148 35 0 chr10 106282199 106282314 -39306974 + AluJb SINE Alu 193 311 -1 2201 114 7 10 chr10 106282322 106282630 -39306658 + AluSx SINE Alu 1 307 -5 2219 123 3 0 chr10 106282630 106282939 -39306349 + AluSx SINE Alu 1 310 -2 2282 105 0 0 chr10 106283193 106283489 -39305799 - AluSx SINE Alu -16 296 1 662 221 67 71 chr10 106283666 106283852 -39305436 + MIR SINE MIR 3 189 -73 2553 66 3 0 chr10 106283852 106284155 -39305133 + AluSp SINE Alu 1 304 -9 662 221 67 71 chr10 106284155 106284221 -39305067 + MIR SINE MIR 189 254 -8 2150 94 40 10 chr10 106284255 106284552 -39304736 + AluSg SINE Alu 1 306 -4 1361 171 85 11 chr10 106284577 106284858 -39304430 + 7SLRNA srpRNA srpRNA 13 314 -6 859 114 0 0 chr10 106284868 106284991 -39304297 + AluY SINE Alu 173 295 -16 606 163 0 0 chr10 106284996 106285094 -39304194 + 7SLRNA srpRNA srpRNA 223 320 0 186 312 78 0 chr10 106285712 106285789 -39303499 + L2 LINE L2 3137 3219 -53 2134 122 0 16 chr10 106285995 106286298 -39302990 - AluSx SINE Alu -14 298 1 2429 47 4 0 chr10 106286442 106286754 -39302534 + AluY SINE Alu 1 313 0 1828 138 0 58 chr10 106286884 106287196 -39302092 - AluJo SINE Alu -7 305 12 233 212 12 106 chr10 106287485 106287526 -39301762 - MIR SINE MIR -78 184 153 1270 136 5 23 chr10 106287526 106287740 -39301548 + MER6B DNA MER2_type 1 210 0 233 212 12 106 chr10 106287740 106287783 -39301505 - MIR SINE MIR -109 153 108 2032 127 0 27 chr10 106287845 106288145 -39301143 + AluSx SINE Alu 1 292 -20 487 198 0 0 chr10 106288296 106288382 -39300906 + AluJ/FRAM SINE Alu 216 301 -11 1370 112 0 5 chr10 106289431 106289645 -39299643 - AluSg/x SINE Alu 0 307 95 2254 115 0 3 chr10 106292143 106292439 -39296849 + AluSx SINE Alu 3 297 -15 252 303 15 23 chr10 106292500 106292632 -39296656 - L1MC/D LINE L1 -1941 5867 5737 1941 90 0 22 chr10 106293089 106293356 -39295932 + AluSq SINE Alu 53 313 0 548 108 236 108 chr10 106293979 106294015 -39295273 + MSTC LTR MaLR 1 31 -397 1968 134 3 39 chr10 106294015 106294321 -39294967 + AluSx SINE Alu 1 295 -17 548 108 236 108 chr10 106294321 106294441 -39294847 + MSTC LTR MaLR 31 177 -251 6691 54 14 1 chr10 106294541 106296102 -39293186 + L1PA5 LINE L1 4583 6154 0 527 88 0 25 chr10 106296130 106296210 -39293078 + MER9 LTR ERVK 358 435 -76 3247 104 0 0 chr10 106296224 106296695 -39292593 + L1P LINE L1 3867 4337 -1809 212 275 0 50 chr10 106297611 106297691 -39291597 + T-rich Low_complexity Low_complexity 3 78 0 534 195 57 0 chr10 106299263 106299386 -39289902 + MIR SINE MIR 48 177 -85 211 347 10 31 chr10 106299961 106300059 -39289229 + MIR SINE MIR 128 223 -39 348 347 82 6 chr10 106300799 106300969 -39288319 - MER117 DNA MER1_type 0 197 15 210 269 31 123 chr10 106300984 106301114 -39288174 - MIR SINE MIR -18 190 72 2146 142 0 0 chr10 106301201 106301497 -39287791 + AluSx SINE Alu 1 296 -16 1418 179 42 6 chr10 106301665 106301978 -39287310 + MER33 DNA MER1_type 1 324 0 609 273 75 35 chr10 106302315 106302542 -39286746 + MIR SINE MIR 20 255 -7 2381 110 0 0 chr10 106302721 106303031 -39286257 - AluSg SINE Alu 0 310 1 1162 162 23 9 chr10 106303102 106303318 -39285970 - MER20 DNA MER1_type 0 219 1 250 186 136 17 chr10 106303326 106303385 -39285903 - MER58 DNA MER1_type 0 2420 2355 2346 99 3 6 chr10 106303387 106303699 -39285589 - AluSx SINE Alu -1 311 1 740 222 34 11 chr10 106303779 106303955 -39285333 + L1ME2 LINE L1 5527 5706 -458 453 130 0 0 chr10 106303957 106304034 -39285254 - AluJ/FRAM SINE Alu -11 301 225 1375 201 19 81 chr10 106304035 106304468 -39284820 + L1ME2 LINE L1 5699 6104 -60 2027 132 14 0 chr10 106304471 106304760 -39284528 + AluSx SINE Alu 1 293 -19 1347 273 84 27 chr10 106304862 106305121 -39284167 - L1ME3A LINE L1 -24 6146 5903 315 0 0 0 chr10 106305121 106305156 -39284132 + (TG)n Simple_repeat Simple_repeat 2 36 0 1347 273 84 27 chr10 106305156 106305446 -39283842 - L1ME3A LINE L1 -267 5903 5566 2276 119 0 0 chr10 106305499 106305793 -39283495 - AluSq SINE Alu -19 294 1 228 269 81 4 chr10 106306601 106306778 -39282510 + MIR SINE MIR 8 262 0 657 241 76 40 chr10 106306788 106307037 -39282251 + MIR SINE MIR 5 262 0 1162 132 93 34 chr10 106307603 106307789 -39281499 + AluJo SINE Alu 96 296 -16 2593 71 0 6 chr10 106307789 106308100 -39281188 + AluY SINE Alu 3 311 0 1162 132 93 34 chr10 106308100 106308118 -39281170 + AluJo SINE Alu 296 312 0 3097 141 11 9 chr10 106308332 106308887 -39280401 + L1MB7 LINE L1 5610 6165 -19 2468 84 0 0 chr10 106309004 106309303 -39279985 + AluY SINE Alu 1 299 -12 425 278 171 11 chr10 106309369 106309556 -39279732 - MIR SINE MIR -10 252 36 1231 185 118 44 chr10 106309647 106309917 -39279371 - AluJo SINE Alu -22 290 1 310 298 43 43 chr10 106309921 106310109 -39279179 - L1ME LINE L1 -329 5792 5605 314 323 99 33 chr10 106310386 106310720 -39278568 - L1ME LINE L1 -308 5813 5458 3801 205 19 77 chr10 106310738 106311767 -39277521 - LTR5 LTR ERVK 0 969 1 2151 109 10 3 chr10 106311915 106312208 -39277080 + AluSx SINE Alu 3 297 -15 1583 145 0 4 chr10 106312504 106312745 -39276543 + AluSg/x SINE Alu 68 307 -5 423 275 43 77 chr10 106312973 106313180 -39276108 + MLT1J LTR MaLR 111 310 -201 317 351 82 0 chr10 106314347 106314518 -39274770 - MIR SINE MIR -9 253 69 2205 138 0 0 chr10 106315002 106315306 -39273982 + AluSx SINE Alu 1 304 -8 2253 136 0 0 chr10 106315328 106315629 -39273659 + AluSx SINE Alu 1 301 -11 2165 111 0 0 chr10 106315651 106315930 -39273358 + AluSx SINE Alu 1 279 -33 194 0 39 0 chr10 106315932 106315958 -39273330 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 220 146 21 21 chr10 106316741 106316789 -39272499 + L2 LINE L2 3224 3271 -1 2439 66 0 17 chr10 106318045 106318347 -39270941 + AluY SINE Alu 1 297 -14 2334 110 0 0 chr10 106318421 106318722 -39270566 + AluSc SINE Alu 1 301 -8 275 182 52 13 chr10 106319698 106319775 -39269513 + MIR SINE MIR 37 116 -146 336 238 33 25 chr10 106319792 106319914 -39269374 - MIR SINE MIR -54 208 86 258 237 23 107 chr10 106319960 106320175 -39269113 - MIR3 SINE MIR -5 203 7 351 211 79 26 chr10 106321108 106321222 -39268066 - MIR SINE MIR -60 148 29 215 233 194 10 chr10 106321403 106321506 -39267782 - L2 LINE L2 -8 3264 3143 247 231 0 0 chr10 106321600 106321652 -39267636 - L2 LINE L2 -8 3264 3213 2433 87 3 0 chr10 106322195 106322493 -39266795 + AluSg SINE Alu 1 299 -11 352 289 25 8 chr10 106323300 106323421 -39265867 - MIR SINE MIR -37 225 103 269 295 205 11 chr10 106323715 106323905 -39265383 + MIR SINE MIR 7 233 -29 2015 139 7 0 chr10 106324805 106325093 -39264195 + AluSx SINE Alu 1 290 -22 2433 87 0 0 chr10 106325641 106325940 -39263348 - AluY SINE Alu -11 300 2 203 143 0 24 chr10 106326156 106326198 -39263090 + (GGA)n Simple_repeat Simple_repeat 3 43 0 264 59 0 0 chr10 106327133 106327167 -39262121 + (TCC)n Simple_repeat Simple_repeat 1 34 0 302 290 57 8 chr10 106327759 106327883 -39261405 - MIR SINE MIR -52 210 81 2295 114 0 0 chr10 106328110 106328400 -39260888 - AluSx SINE Alu -22 290 1 2229 123 0 3 chr10 106328400 106328700 -39260588 - AluSx SINE Alu -12 300 1 2300 103 0 0 chr10 106328736 106329026 -39260262 - AluSx SINE Alu -22 290 1 225 111 56 0 chr10 106329494 106329530 -39259758 + MIR SINE MIR 111 148 -60 509 319 62 12 chr10 106330040 106330281 -39259007 - MIR SINE MIR 0 262 10 976 289 16 4 chr10 106332675 106332928 -39256360 - MIR SINE MIR 0 262 7 203 138 0 0 chr10 106333376 106333405 -39255883 + (TCCC)n Simple_repeat Simple_repeat 1 29 0 1708 157 36 7 chr10 106334531 106334812 -39254476 - AluJb SINE Alu -5 307 19 337 172 0 0 chr10 106334940 106334998 -39254290 + Alu SINE Alu 238 295 -5 405 183 0 0 chr10 106334998 106335069 -39254219 - AluSq/x SINE Alu -195 117 47 2319 82 3 3 chr10 106335114 106335406 -39253882 - AluY SINE Alu -19 292 1 1106 96 0 0 chr10 106335406 106335542 -39253746 - AluSq/x SINE Alu -176 136 1 1085 194 0 0 chr10 106335545 106335731 -39253557 + AluSp SINE Alu 121 306 -7 2204 113 0 0 chr10 106335910 106336221 -39253067 - AluSx SINE Alu 0 311 1 2144 115 28 0 chr10 106336445 106336733 -39252555 + AluSp SINE Alu 1 296 -17 2266 102 10 0 chr10 106336837 106337130 -39252158 + AluSg SINE Alu 1 296 -14 453 264 0 0 chr10 106337250 106337341 -39251947 + MLT1K LTR MaLR 88 178 -410 486 323 39 18 chr10 106338032 106338261 -39251027 + MIR SINE MIR 12 245 -17 549 157 49 0 chr10 106338264 106338366 -39250922 + L1MB8 LINE L1 6015 6121 -57 1349 107 0 0 chr10 106338366 106338544 -39250744 - AluSg/x SINE Alu -16 294 117 2431 94 7 0 chr10 106338549 106338856 -39250432 - AluSg SINE Alu -1 309 1 2430 63 0 41 chr10 106339026 106339345 -39249943 - AluY SINE Alu -5 306 1 1810 102 109 8 chr10 106339865 106340131 -39249157 + AluSq SINE Alu 1 293 -20 444 282 18 74 chr10 106340178 106340268 -39249020 - MLT1J LTR MaLR -250 261 168 2333 80 3 3 chr10 106340268 106340556 -39248732 + AluSp SINE Alu 1 288 -25 186 103 0 0 chr10 106340556 106340585 -39248703 + (TA)n Simple_repeat Simple_repeat 2 30 0 444 282 18 74 chr10 106340585 106340656 -39248632 - MLT1J LTR MaLR -341 170 108 1203 150 64 0 chr10 106340953 106341140 -39248148 + AluJb SINE Alu 94 292 -20 546 129 0 0 chr10 106341255 106341340 -39247948 + AluSg/x SINE Alu 219 303 -7 1783 181 0 10 chr10 106341546 106341838 -39247450 + AluJb SINE Alu 1 289 -23 384 22 0 0 chr10 106341860 106341905 -39247383 + (CA)n Simple_repeat Simple_repeat 1 45 0 666 134 54 0 chr10 106341962 106342074 -39247214 - FLAM_C SINE Alu -15 118 1 793 177 106 10 chr10 106342240 106342438 -39246850 - MLT1C LTR MaLR -244 223 7 2331 102 3 3 chr10 106342567 106342870 -39246418 + AluSp SINE Alu 1 303 -10 2237 98 17 0 chr10 106343093 106343388 -39245900 + AluSq SINE Alu 1 300 -13 1719 194 28 0 chr10 106344172 106344460 -39244828 + AluJb SINE Alu 1 296 -16 2273 112 0 7 chr10 106344463 106344758 -39244530 + AluSx SINE Alu 1 293 -19 952 205 0 6 chr10 106344807 106344968 -39244320 - AluJo SINE Alu -26 286 127 2438 99 0 0 chr10 106345030 106345334 -39243954 - AluSp SINE Alu -9 304 1 727 182 8 0 chr10 106345893 106346025 -39243263 + FAM SINE Alu 1 133 -52 25 0 0 0 chr10 106346108 106346133 -39243155 + AT_rich Low_complexity Low_complexity 1 25 0 2416 72 0 13 chr10 106346460 106346764 -39242524 - AluSq SINE Alu -13 300 1 2191 128 24 0 chr10 106347122 106347419 -39241869 - AluSx SINE Alu -8 304 1 237 313 83 51 chr10 106347908 106348102 -39241186 - MIR SINE MIR -48 214 25 2467 66 0 7 chr10 106348437 106348739 -39240549 - AluY SINE Alu -11 300 1 270 0 0 0 chr10 106348775 106348805 -39240483 + (CA)n Simple_repeat Simple_repeat 2 31 0 243 0 0 0 chr10 106348804 106348831 -39240457 + (TC)n Simple_repeat Simple_repeat 1 27 0 * 226 261 82 67 chr10 106348878 106348995 -39240293 - L2 LINE L2 -56 3257 3136 2757 20 7 0 chr10 106348995 106349299 -39239989 + AluY SINE Alu 1 306 -5 226 261 82 67 chr10 106349299 106349315 -39239973 - L2 LINE L2 -177 3136 3122 2277 112 7 0 chr10 106349627 106349931 -39239357 + AluSq SINE Alu 1 306 -7 384 313 98 55 chr10 106349962 106350362 -39238926 - L2 LINE L2 -351 2963 2547 1760 175 3 13 chr10 106350364 106350672 -39238616 + AluJb SINE Alu 1 305 -7 2315 90 7 0 chr10 106350672 106350972 -39238316 + AluSc SINE Alu 1 302 -7 2081 115 4 4 chr10 106350975 106351288 -39238000 + AluSc SINE Alu 1 313 0 2363 235 122 29 chr10 106351417 106351625 -39237663 - L2 LINE L2 0 3313 3126 2166 113 21 0 chr10 106351625 106351916 -39237372 - AluSq SINE Alu -16 297 1 2363 235 122 29 chr10 106351916 106352190 -39237098 - L2 LINE L2 -187 3126 2879 2511 97 0 0 chr10 106352190 106352499 -39236789 + AluSx SINE Alu 1 309 -3 2244 109 3 0 chr10 106352509 106352802 -39236486 + AluSg SINE Alu 1 294 -16 2363 235 122 29 chr10 106352802 106353434 -39235854 - L2 LINE L2 -442 2871 2077 2252 96 10 0 chr10 106353446 106353737 -39235551 + AluSq SINE Alu 1 294 -19 2032 130 20 7 chr10 106353838 106354131 -39235157 - AluSx SINE Alu -15 297 1 2385 101 7 0 chr10 106354152 106354459 -39234829 - AluSc SINE Alu 0 309 1 1844 188 38 12 chr10 106354465 106354865 -39234423 - L1ME LINE L1 -388 5778 5369 2216 118 3 0 chr10 106355060 106355357 -39233931 + AluSx SINE Alu 1 298 -14 231 224 75 0 chr10 106355851 106355918 -39233370 - MLT1J2 LTR MaLR -8 442 371 1661 163 0 92 chr10 106355938 106356263 -39233025 + AluJb SINE Alu 1 295 -17 1767 190 7 0 chr10 106356265 106356555 -39232733 + AluJb SINE Alu 1 292 -20 1912 155 0 29 chr10 106356657 106356967 -39232321 - AluJb SINE Alu -11 301 1 241 95 60 0 chr10 106357064 106357116 -39232172 - L1MB5 LINE L1 0 6174 6127 487 215 9 0 chr10 106357158 106357265 -39232023 - FLAM_A SINE Alu -34 108 1 985 149 32 0 chr10 106357285 106357439 -39231849 + AluSg/x SINE Alu 135 293 -17 1294 215 38 24 chr10 106357444 106357680 -39231608 - L1MB5 LINE L1 -42 6132 5901 1524 98 0 0 chr10 106357680 106357873 -39231415 - AluY SINE Alu -12 299 107 2417 93 0 13 chr10 106357874 106358187 -39231101 - AluSc SINE Alu 0 309 1 1294 215 38 24 chr10 106358187 106358287 -39231001 - L1MB5 LINE L1 -272 5902 5789 418 100 12 12 chr10 106358302 106358382 -39230906 + AluSp/q SINE Alu 232 311 -2 525 87 0 0 chr10 106358405 106358474 -39230814 + AluSp SINE Alu 6 74 -239 1881 127 75 73 chr10 106358476 106358916 -39230372 - LTR7 LTR ERV1 -2 448 8 1809 91 4 4 chr10 106358916 106359147 -39230141 + AluSp SINE Alu 64 294 -19 307 240 115 10 chr10 106359228 106359324 -39229964 - MIR SINE MIR -58 204 99 299 306 90 42 chr10 106360558 106360702 -39228586 - MIR SINE MIR -65 197 47 424 322 147 22 chr10 106361243 106361746 -39227542 + L1ME4a LINE L1 5338 5903 -218 2512 53 3 13 chr10 106361839 106362142 -39227146 - AluSq SINE Alu -13 300 1 1517 139 39 65 chr10 106362314 106362624 -39226664 + AluJo SINE Alu 1 302 -10 222 176 0 0 chr10 106363267 106363318 -39225970 + GA-rich Low_complexity Low_complexity 1 51 0 26 74 0 0 chr10 106363427 106363481 -39225807 + GC_rich Low_complexity Low_complexity 1 54 0 1955 157 6 10 chr10 106365922 106366234 -39223054 - AluJb SINE Alu -1 311 1 255 284 155 9 chr10 106366345 106366461 -39222827 + MIR SINE MIR 60 192 -70 201 200 100 0 chr10 106366535 106366575 -39222713 - MIR SINE MIR -93 169 126 2259 104 10 0 chr10 106366686 106366974 -39222314 - AluSc SINE Alu -17 292 2 2214 116 3 0 chr10 106366975 106367269 -39222019 - AluSx SINE Alu -17 295 1 194 291 18 0 chr10 106367926 106367981 -39221307 - MIR SINE MIR 0 262 207 2104 124 10 22 chr10 106367981 106368295 -39220993 - AluSx SINE Alu -2 310 1 2111 101 58 0 chr10 106369271 106369549 -39219739 - AluSx SINE Alu -17 295 2 587 217 70 57 chr10 106369809 106370039 -39219249 - MIR SINE MIR -29 233 1 2431 112 0 0 chr10 106370387 106370699 -39218589 - AluSx SINE Alu 0 312 1 1844 101 52 0 chr10 106370962 106371210 -39218078 - AluSx SINE Alu -51 261 1 228 310 129 0 chr10 106371465 106371581 -39217707 - MIR SINE MIR -70 192 62 300 300 31 77 chr10 106372422 106372552 -39216736 + MIR SINE MIR 20 143 -65 2123 127 3 7 chr10 106372564 106372871 -39216417 - AluSq SINE Alu -7 306 1 1579 178 41 0 chr10 106372905 106373174 -39216114 + AluJb SINE Alu 1 280 -32 189 0 0 0 chr10 106373174 106373195 -39216093 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 2490 71 0 40 chr10 106373273 106373597 -39215691 + AluY SINE Alu 1 311 0 2213 126 3 0 chr10 106373608 106373918 -39215370 + AluSx SINE Alu 1 311 -1 794 242 177 23 chr10 106374667 106374787 -39214501 - AluSg SINE Alu 0 300 200 2375 103 0 3 chr10 106374787 106375098 -39214190 - AluSg SINE Alu 0 310 1 794 242 177 23 chr10 106375098 106375237 -39214051 - AluSg SINE Alu -100 200 1 354 244 32 4 chr10 106375242 106375360 -39213928 - MIR SINE MIR -49 159 37 204 125 0 0 chr10 106375617 106375649 -39213639 + (A)n Simple_repeat Simple_repeat 1 32 0 34 79 0 0 chr10 106378120 106378196 -39211092 + GC_rich Low_complexity Low_complexity 1 76 0 249 167 0 0 chr10 106378304 106378358 -39210930 + CT-rich Low_complexity Low_complexity 1 54 0 25 51 0 0 chr10 106378426 106378465 -39210823 + GC_rich Low_complexity Low_complexity 1 39 0 218 204 0 0 chr10 106378825 106378874 -39210414 + (CA)n Simple_repeat Simple_repeat 1 49 0 2456 53 0 0 chr10 106379170 106379479 -39209809 - AluSx SINE Alu 0 309 1 2308 111 0 0 chr10 106379492 106379798 -39209490 - AluSp SINE Alu -7 306 1 1777 168 40 0 chr10 106379955 106380252 -39209036 - AluJb SINE Alu -3 309 1 577 193 377 9 chr10 106380570 106380658 -39208630 - L1M4 LINE L1 -1888 4258 4203 2104 144 0 10 chr10 106380658 106380971 -39208317 - AluJb SINE Alu -2 310 1 577 193 377 9 chr10 106380971 106381105 -39208183 - L1M4 LINE L1 -1943 4203 3954 276 30 0 0 chr10 106381108 106381141 -39208147 + (TTG)n Simple_repeat Simple_repeat 3 35 0 2170 110 0 4 chr10 106381141 106381422 -39207866 - AluSx SINE Alu -32 280 1 740 222 34 11 chr10 106381502 106381678 -39207610 + L1ME2 LINE L1 5527 5706 -458 453 130 0 0 chr10 106381680 106381757 -39207531 - AluJ/FRAM SINE Alu -11 301 225 1375 208 19 80 chr10 106381758 106382194 -39207094 + L1ME2 LINE L1 5699 6106 -78 2230 132 0 0 chr10 106382194 106382533 -39206755 + AluSx SINE Alu 1 312 0 1375 208 19 80 chr10 106382533 106382583 -39206705 + L1ME2 LINE L1 6106 6158 -26 3097 141 11 9 chr10 106382737 106383292 -39205996 + L1MB7 LINE L1 5610 6165 -19 2284 107 6 19 chr10 106383409 106383726 -39205562 + AluSq SINE Alu 1 313 0 454 129 281 65 chr10 106384350 106384386 -39204902 + MSTC LTR MaLR 1 28 -400 1968 134 3 39 chr10 106384386 106384692 -39204596 + AluSx SINE Alu 1 295 -17 454 129 281 65 chr10 106384692 106384794 -39204494 + MSTC LTR MaLR 28 169 -259 1034 80 0 0 chr10 106384905 106385030 -39204258 - AluSq/x SINE Alu -177 136 12 1655 182 7 7 chr10 106385138 106385418 -39203870 - AluJb SINE Alu -24 288 9 2358 107 0 3 chr10 106385476 106385785 -39203503 - AluSx SINE Alu -4 308 1 977 192 23 6 chr10 106385952 106386124 -39203164 - FRAM SINE Alu -8 168 1 2368 99 6 3 chr10 106386128 106386440 -39202848 - AluSq SINE Alu 0 313 1 2210 118 0 0 chr10 106386930 106387218 -39202070 + AluSx SINE Alu 1 288 -24 1589 195 19 29 chr10 106387556 106387869 -39201419 - AluJb SINE Alu -1 311 2 1859 179 0 3 chr10 106388079 106388370 -39200918 + AluJo SINE Alu 1 290 -22 21 36 0 0 chr10 106388372 106388400 -39200888 + AT_rich Low_complexity Low_complexity 1 28 0 2342 81 3 0 chr10 106388400 106388705 -39200583 + AluSp SINE Alu 1 306 0 2244 73 0 7 chr10 106388919 106389191 -39200097 + AluSc SINE Alu 1 270 -39 2368 115 3 0 chr10 106389234 106389546 -39199742 + AluSq SINE Alu 1 313 0 225 346 75 0 chr10 106389744 106389877 -39199411 + L3 LINE CR1 1116 1258 -319 1730 129 119 0 chr10 106389892 106390203 -39199085 - MER7A DNA MER2_type 0 346 1 239 294 0 11 chr10 106390203 106390246 -39199042 + (TA)n Simple_repeat Simple_repeat 2 44 -48 2335 107 0 0 chr10 106390246 106390567 -39198721 + AluSq SINE Alu 1 321 0 239 294 0 11 chr10 106390567 106390612 -39198676 + (TA)n Simple_repeat Simple_repeat 44 92 0 244 304 9 35 chr10 106390626 106390741 -39198547 + L3 LINE CR1 1254 1365 -212 1649 166 4 0 chr10 106393870 106394117 -39195171 - AluJo SINE Alu -64 248 1 724 241 103 5 chr10 106394121 106394324 -39194964 - MIR SINE MIR -10 252 30 246 254 141 73 chr10 106394341 106394431 -39194857 - L1MC/D LINE L1 -1897 5911 5829 2126 155 0 0 chr10 106394431 106394734 -39194554 - AluSx SINE Alu -9 303 1 246 254 141 73 chr10 106394734 106394820 -39194468 - L1MC/D LINE L1 -1979 5829 5723 242 263 224 13 chr10 106394994 106395146 -39194142 + MIR SINE MIR 47 230 -32 280 159 111 0 chr10 106397936 106397999 -39191289 - AluJo SINE Alu 0 302 233 740 176 85 33 chr10 106398000 106398153 -39191135 - AluJo SINE Alu -150 162 2 25 31 0 0 chr10 106398316 106398348 -39190940 + AT_rich Low_complexity Low_complexity 1 32 0 2421 86 0 0 chr10 106398381 106398682 -39190606 + AluY SINE Alu 1 301 -10 1740 116 11 7 chr10 106398701 106398976 -39190312 + MER2 DNA MER2_type 13 288 -57 360 230 0 58 chr10 106398989 106399003 -39190285 + MER2 DNA MER2_type 264 277 -68 942 187 0 6 chr10 106399003 106399169 -39190119 - FRAM SINE Alu 0 166 2 360 230 0 58 chr10 106399169 106399241 -39190047 + MER2 DNA MER2_type 277 345 0 2536 74 3 3 chr10 106399331 106399641 -39189647 + AluSp SINE Alu 1 310 -3 290 289 41 50 chr10 106400465 106400586 -39188702 + MIR SINE MIR 28 147 -115 234 300 254 14 chr10 106400596 106400765 -39188523 - L2 LINE L2 0 3313 3186 2503 53 7 0 chr10 106400765 106401065 -39188223 - AluY SINE Alu -9 302 1 234 300 254 14 chr10 106401065 106401175 -39188113 - L2 LINE L2 -127 3186 2967 497 276 63 59 chr10 106401277 106401385 -39187903 - MIR SINE MIR -6 256 150 2337 117 0 0 chr10 106401385 106401685 -39187603 - AluSx SINE Alu -12 300 1 497 276 63 59 chr10 106401685 106401797 -39187491 - MIR SINE MIR -112 150 35 2258 95 3 0 chr10 106402962 106403270 -39186018 + AluSp SINE Alu 1 309 0 359 143 0 114 chr10 106403270 106403312 -39185976 - L1MB2 LINE L1 -3 6168 6123 2282 94 3 0 chr10 106403312 106403609 -39185679 + AluY SINE Alu 1 298 -13 359 143 0 114 chr10 106403609 106403671 -39185617 - L1MB2 LINE L1 -48 6123 6076 493 162 27 2 chr10 106403674 106403822 -39185466 - AluJb SINE Alu -9 303 120 2082 120 3 41 chr10 106403950 106404133 -39185155 - AluSq SINE Alu -4 309 141 2413 104 7 0 chr10 106404133 106404440 -39184848 - AluSq SINE Alu -4 309 1 2082 120 3 41 chr10 106404440 106404572 -39184716 - AluSq SINE Alu -172 141 6 2758 160 24 60 chr10 106404578 106405007 -39184281 + L1MA9 LINE L1 5419 5819 -493 2056 142 10 0 chr10 106405007 106405309 -39183979 - AluSx SINE Alu -7 305 1 2758 160 24 60 chr10 106405309 106405509 -39183779 + L1MA9 LINE L1 5819 6025 -287 337 313 157 6 chr10 106405514 106405680 -39183608 + L1M4 LINE L1 4457 4647 -1499 255 31 0 0 chr10 106405690 106405722 -39183566 + (TA)n Simple_repeat Simple_repeat 2 33 0 2092 108 11 3 chr10 106406069 106406355 -39182933 - AluSq SINE Alu -25 288 1 1986 233 81 11 chr10 106406367 106406998 -39182290 + L2 LINE L2 2077 2751 -563 2244 109 3 0 chr10 106406998 106407291 -39181997 - AluSg SINE Alu -16 294 1 2481 104 0 0 chr10 106407301 106407610 -39181678 - AluSx SINE Alu -3 309 1 187 300 17 17 chr10 106407614 106407674 -39181614 - MIR SINE MIR -50 212 153 306 243 231 46 chr10 106407687 106407860 -39181428 + MIR SINE MIR 53 257 -5 221 305 54 0 chr10 106407977 106408190 -39181098 + G-rich Low_complexity Low_complexity 1 224 0 192 238 79 16 chr10 106408301 106408364 -39180924 + L2 LINE L2 2702 2768 -546 273 283 197 0 chr10 106408395 106408547 -39180741 - L2 LINE L2 -261 3052 2871 1002 238 36 13 chr10 106408674 106408976 -39180312 + L1MEc LINE L1 37 345 -6051 1736 182 12 80 chr10 106409112 106409262 -39180026 + MSTC LTR MaLR 43 202 -226 1739 154 17 30 chr10 106409262 106409560 -39179728 - AluJo SINE Alu -18 294 1 1736 182 12 80 chr10 106409560 106409591 -39179697 + MSTC LTR MaLR 202 234 -194 2336 109 0 0 chr10 106409591 106409885 -39179403 + AluSq SINE Alu 1 294 -19 2528 55 3 0 chr10 106409885 106410177 -39179111 + AluY SINE Alu 1 293 -18 1736 182 12 80 chr10 106410177 106410406 -39178882 + MSTC LTR MaLR 232 427 -1 1788 113 21 108 chr10 106410757 106410896 -39178392 + AluYb8 SINE Alu 1 150 -168 1482 128 0 9 chr10 106410896 106411107 -39178181 - AluSc SINE Alu -2 307 99 2075 114 43 10 chr10 106411107 106411406 -39177882 + AluSc SINE Alu 1 309 0 1788 113 21 108 chr10 106411406 106411600 -39177688 + AluYb8 SINE Alu 148 306 -12 924 236 9 13 chr10 106411603 106411836 -39177452 + L1MB5 LINE L1 5901 6132 -42 985 149 32 0 chr10 106411841 106411995 -39177293 - AluSg/x SINE Alu -17 293 135 487 215 9 0 chr10 106412015 106412122 -39177166 + FLAM_A SINE Alu 1 108 -34 241 95 60 0 chr10 106412164 106412216 -39177072 + L1MB5 LINE L1 6127 6174 0 1912 155 0 29 chr10 106412313 106412623 -39176665 + AluJb SINE Alu 1 301 -11 438 204 23 0 chr10 106412789 106412877 -39176411 - FRAM/FAM SINE Alu -89 87 1 345 113 0 0 chr10 106412877 106412930 -39176358 - L1MB2 LINE L1 -81 6090 6038 2064 152 3 0 chr10 106412943 106413253 -39176035 - AluSx SINE Alu -1 311 1 2113 116 3 3 chr10 106413284 106413576 -39175712 - AluSx SINE Alu -1 311 20 1307 116 0 45 chr10 106413581 106413779 -39175509 - AluSc SINE Alu -120 189 1 713 226 96 1 chr10 106414460 106414665 -39174623 + MIR SINE MIR 31 251 -11 2542 63 0 3 chr10 106414665 106414967 -39174321 + AluY SINE Alu 1 301 -10 1342 185 44 0 chr10 106415013 106415240 -39174048 - AluJo SINE Alu -21 291 55 1617 173 32 0 chr10 106415696 106415944 -39173344 - AluJo SINE Alu -54 258 3 366 225 144 0 chr10 106416111 106416222 -39173066 - MIR SINE MIR 0 262 136 2244 127 0 6 chr10 106416222 106416536 -39172752 - AluSx SINE Alu 0 312 1 718 170 0 15 chr10 106416552 106416687 -39172601 - FLAM_C SINE Alu 0 133 1 382 280 41 92 chr10 106416804 106417118 -39172170 - L2 LINE L2 -73 3199 2902 274 23 47 0 chr10 106417405 106417448 -39171840 + (TTTTA)n Simple_repeat Simple_repeat 1 45 0 2087 113 4 0 chr10 106417450 106417725 -39171563 - AluSx SINE Alu -34 278 3 1703 188 13 23 chr10 106418489 106418623 -39170665 + AluJo SINE Alu 1 135 -177 2233 89 7 10 chr10 106418623 106418916 -39170372 + AluSx SINE Alu 3 294 -18 1703 188 13 23 chr10 106418916 106419084 -39170204 + AluJo SINE Alu 135 300 -12 682 196 61 10 chr10 106419467 106419490 -39169798 - L1MB7 LINE L1 -31 6143 6123 2279 124 0 3 chr10 106419490 106419796 -39169492 + AluSx SINE Alu 1 305 -7 682 196 61 10 chr10 106419796 106419963 -39169325 - L1MB7 LINE L1 -51 6123 5948 1250 117 12 0 chr10 106420064 106420235 -39169053 + AluSg/x SINE Alu 129 301 -11 697 173 0 50 chr10 106420245 106420384 -39168904 + FLAM_C SINE Alu 2 133 0 1144 113 5 56 chr10 106421025 106421135 -39168153 + MER2 DNA MER2_type 22 119 -226 2111 142 10 0 chr10 106421135 106421430 -39167858 - AluSx SINE Alu -14 298 1 1144 113 5 56 chr10 106421430 106421514 -39167774 + MER2 DNA MER2_type 119 206 -139 2089 121 0 4 chr10 106421515 106421825 -39167463 - AluSx SINE Alu 0 311 3 22 0 0 0 chr10 106421825 106421847 -39167441 + AT_rich Low_complexity Low_complexity 1 22 0 317 274 0 0 chr10 106421850 106421912 -39167376 + MER2 DNA MER2_type 284 345 0 319 154 10 2 chr10 106422043 106422307 -39166981 + AluJb SINE Alu 1 309 0 342 115 0 0 chr10 106422354 106422406 -39166882 + (TA)n Simple_repeat Simple_repeat 2 53 0 2433 87 0 10 chr10 106422406 106422715 -39166573 - AluY SINE Alu -5 306 1 2128 121 7 3 chr10 106422715 106423012 -39166276 - AluSx SINE Alu -13 299 1 1672 154 9 64 chr10 106423152 106423482 -39165806 + AluJb SINE Alu 1 312 0 636 156 17 89 chr10 106423895 106423971 -39165317 + Charlie5 DNA MER1_type 2420 2500 -85 2319 97 3 0 chr10 106423971 106424269 -39165019 + AluSp SINE Alu 1 299 -14 636 156 17 89 chr10 106424269 106424371 -39164917 + Charlie5 DNA MER1_type 2500 2585 0 25 83 0 0 chr10 106424488 106424548 -39164740 + AT_rich Low_complexity Low_complexity 1 60 0 1104 75 0 61 chr10 106424552 106424699 -39164589 + AluSx SINE Alu 1 138 -175 1166 147 0 0 chr10 106424735 106424905 -39164383 + AluSx SINE Alu 121 290 -22 188 257 29 57 chr10 106424983 106425053 -39164235 - L2 LINE L2 0 3313 3246 257 274 145 24 chr10 106425834 106425958 -39163330 + MIR3 SINE MIR 59 197 -11 2200 124 10 0 chr10 106426524 106426831 -39162457 + AluSx SINE Alu 1 310 -2 2328 73 3 3 chr10 106426958 106427247 -39162041 + AluSp SINE Alu 24 312 -1 363 191 52 26 chr10 106427397 106427512 -39161776 + AluSp/q SINE Alu 186 303 0 1279 209 55 114 chr10 106427554 106427628 -39161660 + L1ME3A LINE L1 5317 5394 -776 1887 178 3 0 chr10 106427628 106427931 -39161357 + AluJo SINE Alu 1 304 -8 1279 209 55 114 chr10 106427931 106428289 -39160999 + L1ME3A LINE L1 5394 5701 -469 1704 209 0 0 chr10 106428289 106428576 -39160712 + AluJo SINE Alu 1 287 -25 1279 209 55 114 chr10 106428576 106428782 -39160506 + L1ME3A LINE L1 5701 5918 -252 952 188 7 0 chr10 106428782 106428966 -39160322 - AluJb SINE Alu 0 318 134 1662 183 17 23 chr10 106428966 106429157 -39160131 - AluJo SINE Alu -14 298 108 2479 88 0 0 chr10 106429157 106429462 -39159826 + AluY SINE Alu 1 305 -6 1662 183 17 23 chr10 106429462 106429570 -39159718 - AluJo SINE Alu -204 108 1 2086 137 3 0 chr10 106429614 106429913 -39159375 + AluJb SINE Alu 1 300 -12 567 434 9 88 chr10 106430380 106430700 -39158588 - AluJo SINE Alu -7 295 1 866 54 0 0 chr10 106430816 106430928 -39158360 - HY1 scRNA scRNA 0 112 1 207 153 0 265 chr10 106430953 106431051 -39158237 + MIR3 SINE MIR 120 191 -17 2104 101 14 0 chr10 106431200 106431477 -39157811 + AluSg SINE Alu 1 281 -29 2429 75 3 7 chr10 106431827 106432134 -39157154 - AluY SINE Alu -5 306 1 901 145 0 0 chr10 106432149 106432280 -39157008 - FLAM_C SINE Alu 0 133 3 280 250 80 0 chr10 106432553 106432641 -39156647 + LTR16B LTR ERVL 363 457 -7 5570 73 23 1 chr10 106432641 106433327 -39155961 - LTR5 LTR ERVK 0 969 269 2547 60 0 0 chr10 106433331 106433630 -39155658 - AluY SINE Alu -12 299 1 2397 50 7 0 chr10 106433630 106433909 -39155379 - LTR5 LTR ERVK -684 285 5 22 0 0 0 chr10 106433988 106434010 -39155278 + AT_rich Low_complexity Low_complexity 1 22 0 701 222 59 10 chr10 106434172 106434375 -39154913 + 7SLRNA srpRNA srpRNA 13 225 -95 1116 111 159 11 chr10 106434395 106434584 -39154704 + AluSg/x SINE Alu 80 296 -16 579 163 0 0 chr10 106434589 106434687 -39154601 + 7SLRNA srpRNA srpRNA 223 320 0 196 312 78 0 chr10 106435305 106435382 -39153906 + L2 LINE L2 3137 3219 -53 2115 119 0 17 chr10 106435588 106435881 -39153407 - AluSx SINE Alu -14 298 11 2669 43 3 0 chr10 106436033 106436335 -39152953 + AluY SINE Alu 1 303 -8 2246 87 29 29 chr10 106436339 106436649 -39152639 + AluSg SINE Alu 1 310 0 858 152 0 0 chr10 106436821 106436953 -39152335 - FLAM_C SINE Alu -1 132 1 2480 78 3 3 chr10 106437078 106437386 -39151902 - AluSg SINE Alu -2 308 1 495 210 63 21 chr10 106437473 106437616 -39151672 - L2 LINE L2 -5 3308 3160 2169 125 3 3 chr10 106437622 106437918 -39151370 + AluSp SINE Alu 3 298 -15 242 312 22 22 chr10 106437972 106438110 -39151178 - L1MC/D LINE L1 -1934 5874 5737 505 231 86 0 chr10 106438646 106438763 -39150525 + FLAM_C SINE Alu 1 127 -6 2683 40 3 0 chr10 106439022 106439323 -39149965 - AluY SINE Alu -9 302 1 216 0 0 0 chr10 106439847 106439871 -39149417 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1832 169 51 3 chr10 106439896 106440192 -39149096 - AluJb SINE Alu -2 310 1 1568 207 13 7 chr10 106441009 106441309 -39147979 - AluJb SINE Alu -5 307 6 878 169 0 44 chr10 106441460 106441620 -39147668 - AluSx SINE Alu -159 153 1 1176 241 14 23 chr10 106441625 106442057 -39147231 + L1 LINE L1 3055 3482 -2664 846 152 0 8 chr10 106442059 106442191 -39147097 + AluSg/x SINE Alu 162 292 -20 180 0 0 0 chr10 106442191 106442211 -39147077 + (TA)n Simple_repeat Simple_repeat 2 21 0 25 0 0 0 chr10 106442211 106442236 -39147052 + AT_rich Low_complexity Low_complexity 1 25 0 199 343 105 21 chr10 106442248 106442391 -39146897 - MIR SINE MIR -56 206 52 402 294 81 19 chr10 106442863 106443023 -39146265 + MIR SINE MIR 2 171 -91 2394 85 3 0 chr10 106443025 106443318 -39145970 + AluSp SINE Alu 5 298 -15 557 208 218 46 chr10 106443538 106443735 -39145553 + MIR SINE MIR 11 241 -21 1592 101 46 9 chr10 106443747 106443966 -39145322 - AluSx SINE Alu -75 237 11 1466 188 13 52 chr10 106444121 106444429 -39144859 + AluJo SINE Alu 1 296 -16 2275 82 24 0 chr10 106444429 106444720 -39144568 + AluSx SINE Alu 1 298 -14 255 227 130 33 chr10 106445027 106445154 -39144134 - MIR SINE MIR -65 143 26 208 0 0 133 chr10 106445272 106445355 -39143933 + (CCCCCT)n Simple_repeat Simple_repeat 5 76 0 2364 82 7 3 chr10 106446094 106446400 -39142888 + AluSq SINE Alu 1 307 -6 210 257 129 14 chr10 106446792 106446862 -39142426 - MIR3 SINE MIR -46 162 85 2594 64 0 3 chr10 106448435 106448746 -39140542 - AluY SINE Alu -1 310 1 1714 93 13 4 chr10 106449190 106449416 -39139872 + AluSg/x SINE Alu 83 310 0 304 256 35 23 chr10 106449483 106449569 -39139719 + MIR SINE MIR 11 97 -165 500 250 216 0 chr10 106450635 106450783 -39138505 + MER5A DNA MER1_type 4 183 -6 800 165 8 0 chr10 106450841 106450962 -39138326 + FLAM_C SINE Alu 2 123 -20 1537 178 91 14 chr10 106450970 106451256 -39138032 + AluJo SINE Alu 1 308 -4 1681 148 78 0 chr10 106453096 106453367 -39135921 - AluSg SINE Alu -12 298 7 242 294 113 57 chr10 106453563 106453757 -39135531 - MIR SINE MIR 0 262 58 1673 167 33 11 chr10 106453951 106454226 -39135062 + AluJo SINE Alu 7 287 -25 1571 123 140 56 chr10 106454252 106454537 -39134751 + AluSx SINE Alu 1 309 -3 2162 113 28 3 chr10 106455002 106455293 -39133995 - AluSx SINE Alu -11 301 4 251 242 32 16 chr10 106455352 106455414 -39133874 + MIR SINE MIR 185 247 -15 1920 136 29 0 chr10 106456085 106456365 -39132923 + AluSx SINE Alu 1 288 -24 2266 118 10 0 chr10 106456686 106456991 -39132297 - AluSx SINE Alu -4 308 1 2323 89 3 0 chr10 106457269 106457560 -39131728 - AluSg SINE Alu -18 292 1 998 154 6 13 chr10 106457561 106457717 -39131571 - AluJo/FRAM SINE Alu -14 298 144 1438 148 0 35 chr10 106457719 106457948 -39131340 - AluJo SINE Alu -91 221 1 2313 100 7 3 chr10 106458094 106458395 -39130893 - AluSx SINE Alu -10 302 1 3311 107 27 2 chr10 106458643 106459119 -39130169 + MER1A DNA MER1_type 42 529 0 2602 57 3 0 chr10 106459314 106459615 -39129673 - AluSp SINE Alu -11 302 1 2126 146 0 10 chr10 106459687 106459859 -39129429 - AluSx SINE Alu -7 305 136 2274 126 0 0 chr10 106459859 106460160 -39129128 - AluSg SINE Alu -9 301 1 2126 146 0 10 chr10 106460160 106460295 -39128993 - AluSx SINE Alu -176 136 1 2596 59 0 3 chr10 106460830 106461135 -39128153 - AluSq SINE Alu -9 304 1 1716 182 11 3 chr10 106461143 106461429 -39127859 - AluJb SINE Alu -24 288 1 29 28 0 0 chr10 106462234 106462270 -39127018 + AT_rich Low_complexity Low_complexity 1 36 0 556 255 91 49 chr10 106462414 106462657 -39126631 + L1MC/D LINE L1 4175 4427 -1719 1675 91 5 0 chr10 106462712 106462922 -39126366 + AluY SINE Alu 1 211 -100 1313 139 34 14 chr10 106462941 106463150 -39126138 - AluJb SINE Alu -99 213 1 2130 114 3 41 chr10 106463196 106463379 -39125909 - AluSq SINE Alu -4 309 141 2341 114 0 3 chr10 106463379 106463686 -39125602 - AluSg SINE Alu -4 306 1 2130 114 3 41 chr10 106463686 106463818 -39125470 - AluSq SINE Alu -172 141 6 3117 136 21 57 chr10 106463835 106464253 -39125035 + L1MA9 LINE L1 5429 5819 -493 2151 129 10 0 chr10 106464253 106464556 -39124732 - AluSx SINE Alu -6 306 1 3117 136 21 57 chr10 106464556 106464756 -39124532 + L1MA9 LINE L1 5819 6025 -287 388 302 148 6 chr10 106464761 106464930 -39124358 + L1MC/D LINE L1 4457 4649 -1497 297 0 0 0 chr10 106464938 106464971 -39124317 + (TA)n Simple_repeat Simple_repeat 2 34 0 2577 59 0 3 chr10 106465390 106465694 -39123594 - AluY SINE Alu -8 303 1 1237 267 70 45 chr10 106465796 106465910 -39123378 + L1MC/D LINE L1 5209 5319 -849 1712 141 102 3 chr10 106465910 106466194 -39123094 + AluSx SINE Alu 1 312 0 1237 267 70 45 chr10 106466194 106466524 -39122764 + L1MC/D LINE L1 5319 5665 -503 1818 183 24 9 chr10 106466524 106466862 -39122426 + MER2 DNA MER2_type 2 344 0 1237 267 70 45 chr10 106466862 106467011 -39122277 + L1MC/D LINE L1 5665 5809 -359 301 135 0 0 chr10 106467032 106467084 -39122204 - Alu SINE Alu -1 301 250 912 121 0 15 chr10 106467084 106467216 -39122072 - AluSq/x SINE Alu -182 130 1 2759 167 30 42 chr10 106467466 106468066 -39121222 - L1MD3 LINE L1 0 7995 7403 399 165 11 44 chr10 106468069 106468160 -39121128 - MLT1F1 LTR MaLR -445 122 35 1975 126 54 4 chr10 106468177 106468455 -39120833 - AluJb SINE Alu -20 292 1 305 344 19 39 chr10 106469601 106469755 -39119533 - L1ME LINE L1 -450 5671 5521 1172 145 6 0 chr10 106469796 106469962 -39119326 - AluJo/FRAM SINE Alu -12 300 134 2503 82 3 0 chr10 106469962 106470268 -39119020 - AluSq SINE Alu -6 307 1 2323 89 3 0 chr10 106470546 106470837 -39118451 - AluSg SINE Alu -18 292 1 998 154 6 13 chr10 106470838 106470994 -39118294 - AluJo/FRAM SINE Alu -14 298 144 1438 148 0 35 chr10 106470996 106471225 -39118063 - AluJo SINE Alu -91 221 1 2313 100 7 3 chr10 106471371 106471672 -39117616 - AluSx SINE Alu -10 302 1 3311 107 27 2 chr10 106471920 106472396 -39116892 + MER1A DNA MER1_type 42 529 0 2569 60 3 0 chr10 106472591 106472892 -39116396 - AluSp SINE Alu -11 302 1 2126 146 0 10 chr10 106472964 106473136 -39116152 - AluSx SINE Alu -7 305 136 2274 126 0 0 chr10 106473136 106473437 -39115851 - AluSg SINE Alu -9 301 1 2126 146 0 10 chr10 106473437 106473572 -39115716 - AluSx SINE Alu -176 136 1 2480 92 3 0 chr10 106474107 106474410 -39114878 - AluSp SINE Alu -9 304 1 21 0 0 0 chr10 106474413 106474434 -39114854 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 106474491 106474512 -39114776 + AT_rich Low_complexity Low_complexity 1 21 0 2184 127 0 16 chr10 106474514 106474830 -39114458 + AluSx SINE Alu 1 311 -1 616 190 52 0 chr10 106475018 106475134 -39114154 + MER3 DNA MER1_type 3 124 -85 1747 164 38 14 chr10 106475139 106475295 -39113993 - AluJb SINE Alu -13 299 131 2249 99 16 32 chr10 106475295 106475609 -39113679 - AluSx SINE Alu -2 310 2 1747 164 38 14 chr10 106475609 106475744 -39113544 - AluJb SINE Alu -181 131 1 1380 93 22 0 chr10 106476143 106476325 -39112963 - AluY SINE Alu -13 298 113 335 321 66 25 chr10 106476334 106476406 -39112882 - L1M4 LINE L1 -1877 4269 4201 2350 104 0 3 chr10 106476406 106476713 -39112575 - AluSq SINE Alu -7 306 1 335 321 66 25 chr10 106476713 106476883 -39112405 - L1M4 LINE L1 -1945 4201 4017 412 323 45 20 chr10 106476896 106477094 -39112194 + L2 LINE L2 2831 3033 -239 180 276 61 41 chr10 106477579 106477677 -39111611 - L2 LINE L2 -96 3217 3118 337 335 92 12 chr10 106477756 106477920 -39111368 - L2 LINE L2 -218 3054 2878 192 260 55 27 chr10 106477972 106478045 -39111243 - L2 LINE L2 -415 2899 2825 180 77 0 0 chr10 106478073 106478099 -39111189 + (GGCTG)n Simple_repeat Simple_repeat 4 29 0 22 0 0 0 chr10 106478873 106478895 -39110393 + GC_rich Low_complexity Low_complexity 1 22 0 467 355 32 0 chr10 106479138 106479293 -39109995 - MIR3 SINE MIR -21 187 28 2140 73 38 3 chr10 106479341 106479628 -39109660 - AluSc SINE Alu -12 297 1 2401 92 0 3 chr10 106480259 106480563 -39108725 + AluSp SINE Alu 1 303 -10 359 183 17 0 chr10 106480927 106480987 -39108301 - L2 LINE L2 -2 3311 3251 2251 99 0 16 chr10 106481090 106481394 -39107894 + AluSx SINE Alu 1 299 -13 1061 144 17 6 chr10 106481405 106481585 -39107703 - MER2 DNA MER2_type -163 182 1 565 248 35 35 chr10 106481594 106481739 -39107549 - MIR3 SINE MIR -1 207 63 2215 104 0 3 chr10 106482152 106482449 -39106839 - AluSx SINE Alu -16 296 1 2939 10 0 0 chr10 106482478 106482790 -39106498 - AluYb8 SINE Alu -6 312 1 245 348 11 0 chr10 106484129 106484221 -39105067 - MIR SINE MIR -93 115 23 465 310 89 6 chr10 106485258 106485416 -39103872 - MIR SINE MIR -72 190 20 302 228 32 130 chr10 106487705 106487828 -39101460 - MIR SINE MIR -68 140 30 542 204 136 10 chr10 106487961 106488064 -39101224 - FLAM_A SINE Alu -17 116 1 2081 125 0 26 chr10 106490084 106490186 -39099102 - AluSx SINE Alu -15 297 194 2511 35 6 35 chr10 106490186 106490497 -39098791 - AluY SINE Alu -9 302 1 2081 125 0 26 chr10 106490497 106490699 -39098589 - AluSx SINE Alu -118 194 1 731 209 7 0 chr10 106490702 106490841 -39098447 - FLAM_C SINE Alu -1 142 3 1928 159 36 3 chr10 106492919 106493221 -39096067 + AluJb SINE Alu 1 312 0 199 163 70 0 chr10 106494864 106494907 -39094381 - L2 LINE L2 0 3313 3268 237 288 96 0 chr10 106494931 106495004 -39094284 - MER5B DNA MER1_type -98 80 1 673 240 120 80 chr10 106495695 106495783 -39093505 - MIR SINE MIR -1 261 178 1874 141 45 21 chr10 106495783 106496073 -39093215 - AluJo SINE Alu -10 302 6 673 240 120 80 chr10 106496073 106496209 -39093079 - MIR SINE MIR -84 178 28 470 276 109 45 chr10 106496811 106497032 -39092256 - MIR SINE MIR -18 244 10 421 238 258 20 chr10 106497106 106497257 -39092031 - MER5A DNA MER1_type 0 189 3 225 287 53 144 chr10 106497274 106497311 -39091977 + MER5B DNA MER1_type 8 47 -131 1931 135 0 39 chr10 106497311 106497623 -39091665 - AluJb SINE Alu -12 300 1 2079 121 35 0 chr10 106497629 106497919 -39091369 - AluSq SINE Alu -13 300 1 2013 125 3 33 chr10 106497920 106498223 -39091065 - AluSx SINE Alu -18 294 1 225 287 53 144 chr10 106498223 106498364 -39090924 + MER5B DNA MER1_type 51 178 0 2140 118 14 0 chr10 106499610 106499898 -39089390 - AluSx SINE Alu -20 292 1 1515 212 0 29 chr10 106500281 106500587 -39088701 - AluJo SINE Alu -15 297 1 545 143 0 0 chr10 106500605 106500689 -39088599 - FLAM SINE Alu -13 130 47 2412 72 17 0 chr10 106501235 106501526 -39087762 - AluSq SINE Alu -15 298 3 194 243 36 117 chr10 106502105 106502216 -39087072 - L2 LINE L2 -6 3266 3165 698 190 0 44 chr10 106503070 106503207 -39086081 - FLAM_A SINE Alu -2 131 1 373 237 113 50 chr10 106503696 106503996 -39085292 - L1ME4a LINE L1 -90 6031 5713 1993 148 7 7 chr10 106504127 106504430 -39084858 - AluSx SINE Alu -9 303 1 1186 219 66 50 chr10 106504464 106504862 -39084426 + HAL1 LINE L1 1116 1523 -984 2191 114 7 7 chr10 106504862 106505159 -39084129 - AluSq SINE Alu -16 297 1 1186 219 66 50 chr10 106505159 106505216 -39084072 + HAL1 LINE L1 1523 1578 -929 1698 187 10 7 chr10 106505216 106505526 -39083762 - AluJb SINE Alu -1 311 1 688 205 0 0 chr10 106505529 106505641 -39083647 - FAM SINE Alu -73 112 1 2457 107 0 0 chr10 106505646 106505955 -39083333 - AluSq SINE Alu -4 309 1 612 270 59 14 chr10 106505959 106506248 -39083040 + HAL1 LINE L1 1572 1873 -634 973 173 140 16 chr10 106506252 106506480 -39082808 + MER58B DNA MER1_type 68 329 -2091 1660 162 66 33 chr10 106506480 106506782 -39082506 + AluJb SINE Alu 1 312 0 973 173 140 16 chr10 106506782 106506796 -39082492 + MER58B DNA MER1_type 329 340 -1 1747 154 3 31 chr10 106506891 106507208 -39082080 + AluSx SINE Alu 12 312 0 689 259 114 20 chr10 106507568 106507831 -39081457 + L1MC4a LINE L1 5593 5903 -397 180 0 0 0 chr10 106507831 106507851 -39081437 + (TG)n Simple_repeat Simple_repeat 2 21 0 689 259 114 20 chr10 106507851 106507871 -39081417 + L1MC4a LINE L1 5903 5920 -380 2335 102 0 13 chr10 106508074 106508388 -39080900 + AluSg SINE Alu 1 310 0 557 254 43 0 chr10 106509150 106509288 -39080000 + L2 LINE L2 3169 3312 -1 732 189 81 4 chr10 106511280 106511503 -39077785 - MER58A DNA MER1_type -10 214 44 556 222 120 0 chr10 106511564 106511681 -39077607 + FLAM_A SINE Alu 1 131 -2 1304 113 0 20 chr10 106511681 106511885 -39077403 + LTR9B LTR ERV1 445 644 0 1192 147 15 0 chr10 106511927 106512125 -39077163 + HUERS-P3 LTR ERV1 8718 8918 -1 3300 104 54 8 chr10 106512465 106512985 -39076303 + LTR9B LTR ERV1 17 560 -84 1061 123 49 6 chr10 106513207 106513369 -39075919 - AluSg/x SINE Alu -20 292 124 2013 142 10 3 chr10 106514513 106514815 -39074473 + AluJo SINE Alu 1 304 -8 2513 163 27 10 chr10 106514848 106515327 -39073961 + L1MB7 LINE L1 5687 6173 -11 695 113 10 0 chr10 106515331 106515428 -39073860 + AluSg/x SINE Alu 205 302 -10 894 252 31 14 chr10 106515604 106515826 -39073462 + MIR SINE MIR 37 262 0 322 237 25 0 chr10 106515900 106515990 -39073298 - MIR SINE MIR -62 146 54 2394 91 7 3 chr10 106516032 106516340 -39072948 - AluSp SINE Alu -4 309 1 527 247 202 0 chr10 106516625 106516803 -39072485 + MIR SINE MIR 17 230 -32 2013 120 62 0 chr10 106516861 106517152 -39072136 + AluJb SINE Alu 2 310 -2 903 239 114 80 chr10 106517371 106517860 -39071428 - MLT1J LTR MaLR 0 511 6 255 259 0 0 chr10 106517914 106517968 -39071320 - L2 LINE L2 -8 3305 3252 1562 108 5 0 chr10 106518009 106518213 -39071075 + AluSq SINE Alu 83 287 -26 2413 109 0 0 chr10 106518220 106518532 -39070756 + AluSx SINE Alu 1 312 0 2490 70 7 0 chr10 106518571 106518873 -39070415 + AluY SINE Alu 1 304 -7 1270 111 6 6 chr10 106518886 106519066 -39070222 + AluSg/x SINE Alu 132 311 -1 242 186 136 17 chr10 106519068 106519127 -39070161 + MER58 DNA MER1_type 2355 2420 0 1243 162 23 9 chr10 106519135 106519351 -39069937 + MER20 DNA MER1_type 1 219 0 2376 110 0 0 chr10 106519422 106519732 -39069556 + AluSg SINE Alu 1 310 0 1976 128 11 7 chr10 106519807 106520113 -39069175 - AluSx SINE Alu 0 307 1 288 293 43 43 chr10 106520339 106520527 -39068761 + L1ME LINE L1 5605 5792 -329 1226 185 118 44 chr10 106520531 106520801 -39068487 + AluJo SINE Alu 1 290 -22 461 278 171 11 chr10 106520892 106521079 -39068209 + MIR SINE MIR 36 252 -10 2054 134 0 20 chr10 106521145 106521451 -39067837 - AluJb SINE Alu -12 300 1 2079 121 35 0 chr10 106521457 106521747 -39067541 - AluSq SINE Alu -13 300 1 2013 125 3 33 chr10 106521748 106522051 -39067237 - AluSx SINE Alu -18 294 1 283 234 99 113 chr10 106522051 106522192 -39067096 - MER5B DNA MER1_type -39 139 1 2140 118 14 0 chr10 106523438 106523726 -39065562 - AluSx SINE Alu -20 292 1 1515 212 0 29 chr10 106524109 106524415 -39064873 - AluJo SINE Alu -15 297 1 545 143 0 0 chr10 106524433 106524517 -39064771 - FLAM SINE Alu -13 130 47 2412 72 17 0 chr10 106525063 106525354 -39063934 - AluSq SINE Alu -15 298 3 194 243 36 117 chr10 106525933 106526044 -39063244 - L2 LINE L2 -6 3266 3165 995 179 0 6 chr10 106526429 106526585 -39062703 - AluJo SINE Alu -157 155 1 1155 156 114 17 chr10 106526612 106526849 -39062439 + AluJo SINE Alu 44 303 -9 2135 128 7 3 chr10 106527012 106527318 -39061970 + AluSp SINE Alu 6 312 -1 212 325 129 36 chr10 106527949 106528143 -39061145 + L2 LINE L2 2328 2539 -775 2198 117 3 0 chr10 106529052 106529351 -39059937 - AluSx SINE Alu -8 304 5 1851 138 24 10 chr10 106529516 106529812 -39059476 + AluJb SINE Alu 10 309 -3 323 217 25 33 chr10 106529958 106530078 -39059210 + L1ME2 LINE L1 6036 6154 -10 400 266 58 13 chr10 106531174 106531328 -39057960 + MIR SINE MIR 1 161 -101 376 268 31 0 chr10 106533408 106533505 -39055783 - MIR SINE MIR -81 127 28 409 325 175 15 chr10 106533851 106534251 -39055037 + L2 LINE L2 1935 2398 -916 2207 92 7 27 chr10 106534579 106534902 -39054386 + AluSx SINE Alu 1 317 0 193 329 63 13 chr10 106535329 106535408 -39053880 + L2 LINE L2 3180 3262 -10 455 276 75 8 chr10 106535741 106535875 -39053413 + MIR3 SINE MIR 21 163 -45 198 242 30 15 chr10 106535925 106535991 -39053297 - L3 LINE CR1 -209 1368 1302 393 271 20 10 chr10 106536100 106536194 -39053094 - L1MC4 LINE L1 -1340 6702 6613 1840 179 3 0 chr10 106536194 106536490 -39052798 - AluJo SINE Alu -15 297 1 331 250 235 15 chr10 106536957 106537089 -39052199 - L2 LINE L2 -1 3312 3152 1841 259 106 15 chr10 106537097 106537710 -39051578 + L2 LINE L2 2199 2867 -447 259 276 239 55 chr10 106537711 106537983 -39051305 + L2 LINE L2 2972 3293 -20 251 203 62 16 chr10 106538454 106538518 -39050770 - MIR3 SINE MIR -6 202 136 324 226 123 40 chr10 106538673 106538818 -39050470 + MIR SINE MIR 42 197 -64 396 240 20 82 chr10 106538905 106539051 -39050237 + MIR SINE MIR 56 192 -70 3851 136 16 68 chr10 106539752 106540546 -39048742 - L1MB3 LINE L1 0 6183 5431 870 148 0 15 chr10 106540629 106540764 -39048524 + AluJo/FLAM SINE Alu 1 133 -169 2512 65 3 13 chr10 106540766 106541075 -39048213 + AluSg SINE Alu 1 306 -4 803 274 25 0 chr10 106541341 106541545 -39047743 - MIR SINE MIR -44 218 10 295 322 100 48 chr10 106541614 106541844 -39047444 - MIR SINE MIR -15 247 6 327 91 0 0 chr10 106542034 106542078 -39047210 + L2 LINE L2 3263 3306 -7 405 252 25 75 chr10 106542392 106542551 -39046737 - MIR SINE MIR -46 216 66 294 213 118 66 chr10 106542577 106542713 -39046575 + MIR SINE MIR 101 243 -19 2192 106 0 40 chr10 106542919 106543222 -39046066 - AluSg SINE Alu -16 294 4 2161 140 3 7 chr10 106543231 106543539 -39045749 - AluSx SINE Alu -5 307 1 881 282 14 7 chr10 106543648 106543867 -39045421 + MIR SINE MIR 45 262 0 268 341 45 0 chr10 106544471 106544559 -39044729 - MIR SINE MIR -17 245 154 418 259 100 63 chr10 106545057 106545296 -39043992 - MIR SINE MIR -13 249 2 205 315 120 0 chr10 106545302 106545394 -39043894 - L2 LINE L2 -16 3256 3154 1828 163 4 0 chr10 106546991 106547267 -39042021 - AluJo SINE Alu -16 296 20 204 125 0 0 chr10 106547271 106547303 -39041985 + (T)n Simple_repeat Simple_repeat 1 32 0 185 225 0 0 chr10 106548649 106548689 -39040599 - L2 LINE L2 -1 3312 3273 353 280 108 84 chr10 106548731 106549185 -39040103 - MLT1K LTR MaLR -7 581 117 2423 75 14 0 chr10 106549768 106550061 -39039227 + AluY SINE Alu 1 297 -14 216 0 0 0 chr10 106550779 106550803 -39038485 + (A)n Simple_repeat Simple_repeat 1 24 0 703 296 31 9 chr10 106552359 106552582 -39036706 - MIR SINE MIR -23 239 12 485 280 99 11 chr10 106553516 106553698 -39035590 + MIR SINE MIR 5 202 -60 368 353 115 14 chr10 106553894 106554172 -39035116 - L2 LINE L2 -23 3290 2985 287 239 42 14 chr10 106554198 106554269 -39035019 - MER91A DNA MER1_type 0 196 124 185 321 48 36 chr10 106554794 106554959 -39034329 + L3 LINE CR1 1261 1427 -150 248 303 61 20 chr10 106555674 106555773 -39033515 - L3 LINE CR1 -18 1559 1457 180 281 111 52 chr10 106556014 106556149 -39033139 - MIR3 SINE MIR -63 145 3 208 291 173 27 chr10 106556909 106557019 -39032269 - MIR SINE MIR -109 153 28 1763 155 0 22 chr10 106557670 106557948 -39031340 - AluJo SINE Alu -40 272 1 326 239 128 65 chr10 106558183 106558571 -39030717 - MLT1J LTR MaLR -50 461 8 194 283 19 0 chr10 106558945 106558998 -39030290 - L2 LINE L2 -211 3061 3008 323 306 161 12 chr10 106559132 106559374 -39029914 + L2 LINE L2 2974 3251 -62 284 264 73 51 chr10 106559412 106559590 -39029698 - L2 LINE L2 -485 2829 2648 770 250 11 0 chr10 106559738 106559918 -39029370 + L1ME LINE L1 5514 5695 -426 270 351 9 0 chr10 106560039 106560150 -39029138 + L2 LINE L2 2583 2694 -620 1940 96 0 16 chr10 106560175 106560426 -39028862 + AluSx SINE Alu 60 306 -6 2223 108 10 3 chr10 106560437 106560742 -39028546 + AluSq SINE Alu 1 307 -6 636 138 81 24 chr10 106560753 106560876 -39028412 + AluJ SINE Alu 4 133 -179 278 78 0 20 chr10 106560993 106561044 -39028244 + (TTTA)n Simple_repeat Simple_repeat 3 52 0 6256 50 39 36 chr10 106561044 106561899 -39027389 - SVA Other Other -23 1363 507 5228 72 109 20 chr10 106562027 106562810 -39026478 - SVA Other Other -531 855 4 287 308 161 56 chr10 106562826 106563216 -39026072 + L2 LINE L2 2827 3257 -15 386 69 17 0 chr10 106563218 106563276 -39026012 + (TGAA)n Simple_repeat Simple_repeat 1 59 0 1025 162 0 0 chr10 106563308 106563462 -39025826 + AluJ SINE Alu 136 289 -23 200 204 68 0 chr10 106563482 106563526 -39025762 + L2 LINE L2 3261 3307 -6 40 31 0 15 chr10 106563855 106563901 -39025387 + AT_rich Low_complexity Low_complexity 1 47 -17 2442 73 0 10 chr10 106563901 106564204 -39025084 - AluY SINE Alu -11 300 1 40 31 0 15 chr10 106564204 106564222 -39025066 + AT_rich Low_complexity Low_complexity 47 64 0 1792 104 6 119 chr10 106564231 106564568 -39024720 - AluSx SINE Alu -3 299 1 1162 81 0 13 chr10 106565381 106565530 -39023758 + AluSp SINE Alu 1 147 -166 2387 92 7 0 chr10 106565533 106565838 -39023450 + AluSq SINE Alu 7 313 0 2219 120 7 0 chr10 106566660 106566959 -39022329 + AluSx SINE Alu 1 301 -11 201 354 83 0 chr10 106567261 106567357 -39021931 - L2 LINE L2 -5 3267 3164 345 100 0 0 chr10 106567580 106567630 -39021658 + (CA)n Simple_repeat Simple_repeat 2 51 0 2394 100 0 0 chr10 106568351 106568660 -39020628 + AluY SINE Alu 1 309 -2 1479 201 47 7 chr10 106568675 106568954 -39020334 + AluJo SINE Alu 12 301 -11 21 0 0 0 chr10 106568984 106569005 -39020283 + AT_rich Low_complexity Low_complexity 1 21 0 357 209 58 0 chr10 106570424 106570510 -39018778 + MER53 DNA DNA 1 91 -98 266 325 42 33 chr10 106570771 106570891 -39018397 - MER5A DNA MER1_type -3 186 66 2176 139 3 0 chr10 106570894 106571204 -39018084 - AluSp SINE Alu -2 311 1 250 316 82 0 chr10 106571248 106571346 -39017942 - MIR3 SINE MIR -22 186 81 1755 104 5 0 chr10 106571956 106572201 -39017087 + AluSx SINE Alu 61 306 0 422 282 27 0 chr10 106572696 106572806 -39016482 - MIR3 SINE MIR -15 193 81 252 111 0 0 chr10 106572814 106572859 -39016429 + (GA)n Simple_repeat Simple_repeat 1 45 0 2033 143 7 3 chr10 106573153 106573453 -39015835 - AluJb SINE Alu -11 301 1 294 336 36 0 chr10 106573559 106573669 -39015619 - L3 LINE CR1 -87 1490 1377 1676 127 127 8 chr10 106573675 106573935 -39015353 + AluSg1 SINE Alu 1 291 -18 263 330 9 46 chr10 106574005 106574114 -39015174 + MIR SINE MIR 17 121 -141 459 48 0 0 chr10 106574310 106574372 -39014916 + (CA)n Simple_repeat Simple_repeat 2 63 0 2314 87 7 23 chr10 106574407 106574707 -39014581 - AluY SINE Alu -16 295 1 1066 62 169 34 chr10 106574737 106574915 -39014373 + Tigger2a DNA MER2_type 1 202 -232 915 154 0 0 chr10 106574915 106575051 -39014237 - FLAM_C SINE Alu -7 136 1 1461 137 8 0 chr10 106575051 106575285 -39014003 + Tigger2a DNA MER2_type 209 444 0 234 279 224 12 chr10 106575337 106575455 -39013833 - L3 LINE CR1 -255 1322 1230 2145 105 10 39 chr10 106575455 106575760 -39013528 - AluSq SINE Alu -17 296 1 234 279 224 12 chr10 106575760 106575802 -39013486 - L3 LINE CR1 -347 1230 1128 226 293 98 0 chr10 106576089 106576171 -39013117 + MIR SINE MIR 30 119 -89 475 270 32 8 chr10 106576708 106576834 -39012454 - MER5B DNA MER1_type -49 129 1 208 264 0 0 chr10 106577069 106577122 -39012166 + MIR SINE MIR 16 68 -194 2408 98 0 3 chr10 106577724 106578031 -39011257 + AluSq SINE Alu 1 306 -7 314 299 75 37 chr10 106578041 106578175 -39011113 + MIR SINE MIR 47 185 -77 2087 148 0 3 chr10 106578265 106578563 -39010725 - AluJo SINE Alu -13 299 3 373 303 25 17 chr10 106578574 106578693 -39010595 - MIR SINE MIR -56 206 87 182 291 35 23 chr10 106578928 106579014 -39010274 + L2 LINE L2 3133 3219 -53 423 259 106 26 chr10 106579066 106579255 -39010033 + MIR SINE MIR 47 250 -12 387 232 0 0 chr10 106579219 106579301 -39009987 - MIR SINE MIR 0 262 181 * 1952 151 3 7 chr10 106580149 106580448 -39008840 - AluJb SINE Alu -14 298 1 47 47 0 12 chr10 106581368 106581432 -39007856 + AT_rich Low_complexity Low_complexity 1 65 -20 700 195 0 0 chr10 106581432 106581550 -39007738 - FLAM_C SINE Alu -15 118 1 47 47 0 12 chr10 106581550 106581571 -39007717 + AT_rich Low_complexity Low_complexity 65 85 0 2143 154 0 0 chr10 106581634 106581945 -39007343 + AluSx SINE Alu 1 311 -1 249 236 0 0 chr10 106582007 106582062 -39007226 + MIR3 SINE MIR 143 197 -11 183 175 50 25 chr10 106582227 106582267 -39007021 + MIR SINE MIR 111 151 -111 217 264 22 33 chr10 106582649 106582740 -39006548 + L2 LINE L2 3013 3102 -211 192 97 0 0 chr10 106582873 106582904 -39006384 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 201 197 0 99 chr10 106582963 106583034 -39006254 - L2 LINE L2 -216 3056 2993 2351 113 0 0 chr10 106583468 106583778 -39005510 + AluSq SINE Alu 1 310 -3 2019 124 67 0 chr10 106585989 106586272 -39003016 - AluSx SINE Alu -10 302 1 229 191 0 0 chr10 106586649 106586691 -39002597 + (CA)n Simple_repeat Simple_repeat 2 43 0 277 303 20 10 chr10 106587015 106587114 -39002174 - MER5A DNA MER1_type -85 104 5 909 98 8 0 chr10 106587168 106587300 -39001988 + FLAM_C SINE Alu 1 133 0 355 216 111 49 chr10 106587697 106587826 -39001462 - L1ME4a LINE L1 -3 6118 5976 836 203 0 18 chr10 106587826 106587989 -39001299 - FRAM SINE Alu -6 160 1 355 216 111 49 chr10 106587989 106588021 -39001267 - L1ME4a LINE L1 -145 5976 5947 1322 165 40 44 chr10 106588025 106588297 -39000991 + AluJo SINE Alu 33 303 -9 2092 133 0 23 chr10 106588307 106588616 -39000672 - AluSx SINE Alu -10 302 1 496 287 27 5 chr10 106588754 106588942 -39000346 - L1ME4a LINE L1 -332 5789 5598 2367 107 3 0 chr10 106589036 106589344 -38999944 - AluSq SINE Alu -4 309 1 267 333 29 0 chr10 106589890 106589995 -38999293 + MARNA DNA Mariner 396 503 -83 2051 143 3 6 chr10 106590146 106590460 -38998828 - AluSq SINE Alu 0 313 1 198 0 0 0 chr10 106590460 106590482 -38998806 + (TTTA)n Simple_repeat Simple_repeat 4 25 0 1903 143 0 11 chr10 106590482 106590761 -38998527 - AluJo SINE Alu -30 282 7 3881 35 23 0 chr10 106591377 106591856 -38997432 - LTR2B LTR ERV1 0 490 1 24034 109 10 6 chr10 106591856 106595388 -38993900 - Harlequin LTR ERV1 0 6896 3352 4740 67 35 5 chr10 106595387 106596149 -38993139 - Harlequin LTR ERV1 -4322 2574 1790 * 225 246 203 0 chr10 106596149 106596218 -38993070 + LTR8 LTR ERV1 171 253 -438 1114 33 0 7 chr10 106596218 106596370 -38992918 - Harlequin LTR ERV1 -5174 1722 1572 * 6384 83 28 7 chr10 106596355 106597239 -38992049 - Harlequin LTR ERV1 -5993 903 1 3929 39 17 0 chr10 106597239 106597721 -38991567 - LTR2B LTR ERV1 0 490 1 1222 111 21 32 chr10 106597846 106598036 -38991252 + MER4D LTR ERV1 1 188 -715 1330 115 6 0 chr10 106598037 106598211 -38991077 + AluSx SINE Alu 3 177 -135 875 132 0 20 chr10 106598211 106598363 -38990925 - LTR7 LTR ERV1 0 450 302 864 114 0 21 chr10 106598622 106598762 -38990526 - LTR7 LTR ERV1 -313 137 1 3521 110 14 9 chr10 106598762 106599316 -38989972 - HERVH LTR ERV1 0 7713 7157 * 5327 145 23 3 chr10 106599309 106600215 -38989073 - HERVH LTR ERV1 -1697 6016 5093 3091 152 36 30 chr10 106600215 106600473 -38988815 + MER4D LTR ERV1 293 548 -355 2332 109 0 3 chr10 106600473 106600776 -38988512 - AluSq SINE Alu -11 302 1 3091 152 36 30 chr10 106600776 106601124 -38988164 + MER4D LTR ERV1 548 903 0 445 307 139 9 chr10 106601124 106601339 -38987949 - L1M4 LINE L1 -1354 4792 4550 870 184 25 0 chr10 106601418 106601576 -38987712 + FRAM SINE Alu 1 160 -16 1825 176 0 25 chr10 106601608 106601926 -38987362 - AluJb SINE Alu -2 310 1 409 293 66 60 chr10 106602045 106602380 -38986908 - L1MEd LINE L1 -5272 847 511 508 273 104 0 chr10 106602402 106602556 -38986732 + MIR SINE MIR 37 206 -56 648 146 0 0 chr10 106602991 106603094 -38986194 - AluJb SINE Alu -20 292 190 1952 79 12 12 chr10 106603197 106603451 -38985837 + AluSq SINE Alu 58 311 -2 1879 132 0 15 chr10 106604177 106604449 -38984839 - AluSx SINE Alu -8 304 37 216 349 48 0 chr10 106604459 106604542 -38984746 - MIR SINE MIR -14 248 162 2391 85 3 0 chr10 106604591 106604886 -38984402 - AluSp SINE Alu -17 296 1 207 289 53 13 chr10 106604991 106605067 -38984221 + MIR SINE MIR 170 248 -14 244 208 38 0 chr10 106605124 106605177 -38984111 + L2 LINE L2 3168 3222 -50 199 274 32 38 chr10 106605182 106605293 -38983995 - MIR SINE MIR -95 113 3 1408 199 15 83 chr10 106605326 106605563 -38983725 - MLT1A2 LTR MaLR 0 374 173 830 136 8 0 chr10 106605563 106605695 -38983593 + FLAM_A SINE Alu 1 133 0 1408 199 15 83 chr10 106605695 106605854 -38983434 - MLT1A2 LTR MaLR -201 173 5 2273 103 7 0 chr10 106609198 106609489 -38979799 - AluSx SINE Alu -19 293 1 2178 110 10 20 chr10 106609760 106610059 -38979229 + AluSx SINE Alu 1 296 -16 214 176 15 103 chr10 106610709 106610777 -38978511 - L2 LINE L2 -1 3271 3210 * 320 217 14 0 chr10 106610753 106610822 -38978466 - MIR SINE MIR -33 229 160 233 159 0 23 chr10 106610853 106610897 -38978391 - L2 LINE L2 -3 3269 3227 331 265 48 0 chr10 106611180 106611263 -38978025 - L2 LINE L2 0 3272 3186 274 230 186 44 chr10 106611276 106611389 -38977899 + AluJb SINE Alu 8 136 -166 2180 114 7 10 chr10 106611390 106611689 -38977599 + AluSx SINE Alu 1 298 -14 2082 133 0 3 chr10 106612431 106612760 -38976528 - AluSx SINE Alu 0 328 1 1732 164 3 43 chr10 106612762 106613066 -38976222 - AluJo SINE Alu -20 292 1 588 240 0 0 chr10 106613068 106613193 -38976095 - FLAM_A SINE Alu -8 125 1 317 214 22 11 chr10 106613741 106613830 -38975458 + MER5A DNA MER1_type 17 106 -83 447 277 85 17 chr10 106614633 106614798 -38974490 + MIR SINE MIR 19 198 -64 759 130 26 0 chr10 106614798 106614913 -38974375 + FLAM_C SINE Alu 1 118 -15 447 277 85 17 chr10 106614913 106614924 -38974364 + MIR SINE MIR 198 207 -55 1112 159 0 0 chr10 106615071 106615234 -38974054 - AluSg/x SINE Alu -13 297 135 558 139 58 36 chr10 106615238 106615339 -38973949 - L1MB4 LINE L1 0 6180 6074 2384 97 0 28 chr10 106615339 106615660 -38973628 - AluSx SINE Alu 0 312 1 558 139 58 36 chr10 106615660 106615695 -38973593 - L1MB4 LINE L1 -106 6074 6041 191 36 36 0 chr10 106615926 106615954 -38973334 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 242 313 80 51 chr10 106616267 106616443 -38972845 - L2 LINE L2 -226 3046 2866 188 298 143 0 chr10 106616849 106616933 -38972355 + MIR3 SINE MIR 83 178 -30 266 274 9 0 chr10 106617500 106617613 -38971675 + (TCCA)n Simple_repeat Simple_repeat 4 117 0 214 287 238 0 chr10 106617620 106617721 -38971567 + MIR SINE MIR 82 206 -56 201 244 0 0 chr10 106617852 106617893 -38971395 - L2 LINE L2 -213 3059 3019 185 125 0 0 chr10 106618762 106618794 -38970494 - MIR3 SINE MIR -7 201 170 998 186 16 21 chr10 106619050 106619243 -38970045 - MER20 DNA MER1_type -1 218 27 197 243 185 16 chr10 106620815 106620988 -38968300 + MIR SINE MIR 15 212 -50 339 319 45 13 chr10 106621321 106621478 -38967810 - MIR SINE MIR -79 183 22 2344 83 0 0 chr10 106621639 106621917 -38967371 + AluSg SINE Alu 20 297 -13 293 267 83 25 chr10 106622669 106622789 -38966499 + MIR SINE MIR 20 146 -116 854 129 0 0 chr10 106623068 106623200 -38966088 + FLAM_C SINE Alu 1 132 -1 2321 87 3 0 chr10 106623280 106623569 -38965719 - AluSg SINE Alu -20 290 1 1920 168 0 7 chr10 106623571 106623875 -38965413 - AluSx SINE Alu -10 302 1 2383 78 3 37 chr10 106623949 106624271 -38965017 - AluY SINE Alu 0 311 1 321 26 0 0 chr10 106627171 106627209 -38962079 + (TTTAA)n Simple_repeat Simple_repeat 3 40 0 823 109 0 48 chr10 106627209 106627345 -38961943 - L1PA10 LINE L1 -19 6149 6019 841 174 0 67 chr10 106627374 106627552 -38961736 - AluJo/FRAM SINE Alu 0 302 137 1438 142 9 13 chr10 106627555 106627581 -38961707 - AluSg/x SINE Alu -4 306 281 396 0 0 0 chr10 106627581 106627625 -38961663 + (TG)n Simple_repeat Simple_repeat 1 44 0 1438 142 9 13 chr10 106627625 106627823 -38961465 - AluSg/x SINE Alu -29 281 83 240 179 0 0 chr10 106627825 106627864 -38961424 - Alu SINE Alu -54 112 74 715 211 24 77 chr10 106627864 106628006 -38961282 + L1MD3 LINE L1 7789 7918 -77 2487 74 0 0 chr10 106628006 106628305 -38960983 - AluY SINE Alu -12 299 1 715 211 24 77 chr10 106628305 106628370 -38960918 + L1MD3 LINE L1 7918 7985 -10 2123 139 3 7 chr10 106628512 106628822 -38960466 + AluSx SINE Alu 1 309 -3 2370 115 0 3 chr10 106628959 106629271 -38960017 + AluSx SINE Alu 1 311 -1 204 233 55 14 chr10 106629552 106629625 -38959663 - L2 LINE L2 -301 2971 2896 2357 101 0 0 chr10 106629638 106629934 -38959354 - AluSq SINE Alu -17 296 1 2163 121 0 19 chr10 106629934 106630108 -38959180 - AluSx SINE Alu -5 307 140 2274 129 0 0 chr10 106630108 106630418 -38958870 - AluSg SINE Alu 0 310 1 2163 121 0 19 chr10 106630418 106630556 -38958732 - AluSx SINE Alu -172 140 1 363 252 84 53 chr10 106631090 106631178 -38958110 - MIR SINE MIR 0 262 166 2174 103 4 4 chr10 106631178 106631480 -38957808 + AluSx SINE Alu 1 302 0 363 252 84 53 chr10 106631480 106631521 -38957767 - MIR SINE MIR -96 166 128 224 286 143 33 chr10 106631753 106631917 -38957371 - MIR3 SINE MIR -64 144 10 666 84 0 21 chr10 106632873 106632968 -38956320 - AluJo/FRAM SINE Alu -14 298 206 664 182 0 0 chr10 106632968 106633089 -38956199 - FLAM_C SINE Alu -2 141 21 338 267 126 26 chr10 106633294 106633439 -38955849 + L1ME3A LINE L1 5412 5541 -580 1731 168 44 10 chr10 106633439 106633736 -38955552 + AluJb SINE Alu 1 307 -5 338 267 126 26 chr10 106633736 106633887 -38955401 + L1ME3A LINE L1 5541 5738 -383 689 163 24 8 chr10 106633929 106634052 -38955236 - FLAM_C SINE Alu -17 126 2 446 320 30 0 chr10 106634060 106634260 -38955028 + L1ME3A LINE L1 5732 5937 -233 630 164 0 0 chr10 106634281 106634385 -38954903 + FRAM SINE Alu 56 159 -17 654 287 0 16 chr10 106635093 106635281 -38954007 + MIR SINE MIR 67 251 -11 360 268 89 8 chr10 106636725 106636848 -38952440 + MIR SINE MIR 20 152 -110 263 310 0 0 chr10 106637945 106638016 -38951272 - MER5A DNA MER1_type 0 189 119 258 206 0 0 chr10 106638368 106638431 -38950857 + CT-rich Low_complexity Low_complexity 2 64 0 1922 147 16 35 chr10 106638441 106638755 -38950533 - AluSx SINE Alu -4 308 1 1987 114 0 7 chr10 106638757 106639029 -38950259 - AluSx SINE Alu -4 308 39 639 197 0 0 chr10 106639029 106639146 -38950142 - AluJb SINE Alu -2 310 194 913 138 0 21 chr10 106639146 106639291 -38949997 - FLAM_C SINE Alu -1 142 1 2165 94 11 0 chr10 106639314 106639623 -38949665 - AluSg SINE Alu 0 312 1 2650 156 19 33 chr10 106639623 106640084 -38949204 - L1MD1 LINE L1 -10 6232 5779 1840 150 17 7 chr10 106640084 106640384 -38948904 - AluJo SINE Alu -9 303 1 2650 156 19 33 chr10 106640384 106640462 -38948826 - L1MD1 LINE L1 -463 5779 5701 416 68 17 0 chr10 106640467 106640526 -38948762 + Alu SINE Alu 5 64 -246 242 207 0 0 chr10 106640632 106640690 -38948598 + AluJ/monomer SINE Alu 244 301 -1 1643 238 107 27 chr10 106640691 106641052 -38948236 - MLT1G LTR MaLR -52 538 160 2415 76 7 0 chr10 106641052 106641342 -38947946 - AluSp SINE Alu -21 292 1 1643 238 107 27 chr10 106641342 106641516 -38947772 - MLT1G LTR MaLR -430 160 1 2193 131 7 0 chr10 106641616 106641921 -38947367 + AluSx SINE Alu 1 307 -5 2250 112 10 0 chr10 106643005 106643309 -38945979 + AluSx SINE Alu 1 307 -5 2388 99 3 0 chr10 106643391 106643693 -38945595 + AluSq SINE Alu 1 303 -10 2281 130 0 0 chr10 106643694 106644002 -38945286 + AluSx SINE Alu 3 310 -2 297 109 0 0 chr10 106644013 106644068 -38945220 + (TTA)n Simple_repeat Simple_repeat 2 56 0 234 0 0 0 chr10 106644210 106644236 -38945052 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 1152 99 0 0 chr10 106644286 106644437 -38944851 - AluSg/x SINE Alu -3 309 159 263 154 0 0 chr10 106644437 106644476 -38944812 - Alu SINE Alu -263 39 1 936 196 5 35 chr10 106644872 106645071 -38944217 + MIR SINE MIR 36 228 -34 2342 100 0 10 chr10 106645073 106645405 -38943883 + AluSq SINE Alu 1 313 0 2422 96 0 6 chr10 106646235 106646549 -38942739 + AluSx SINE Alu 1 312 0 877 110 0 22 chr10 106646726 106646862 -38942426 + FLAM_C SINE Alu 1 133 0 2374 79 0 0 chr10 106646871 106647151 -38942137 + AluSg SINE Alu 1 280 -30 288 0 0 0 chr10 106647154 106647186 -38942102 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 259 217 101 0 chr10 106647186 106647255 -38942033 - MIR3 SINE MIR -27 181 106 663 239 88 57 chr10 106647543 106647628 -38941660 + MLT1H LTR MaLR 13 94 -455 1941 108 58 4 chr10 106647628 106647905 -38941383 + AluSx SINE Alu 1 292 -20 663 239 88 57 chr10 106647905 106648277 -38941011 + MLT1H LTR MaLR 94 548 -1 2057 128 3 29 chr10 106648440 106648752 -38940536 + AluJb SINE Alu 7 310 -2 978 191 0 0 chr10 106648886 106649081 -38940207 - FRAM SINE Alu 0 193 1 363 306 50 8 chr10 106649136 106649257 -38940031 + MER5A DNA MER1_type 64 189 0 467 172 52 60 chr10 106649751 106649885 -38939403 + AluJb SINE Alu 160 292 -20 782 163 0 37 chr10 106650008 106650143 -38939145 - FLAM_A SINE Alu -3 130 1 2548 75 0 3 chr10 106650159 106650467 -38938821 - AluY SINE Alu -4 307 1 713 231 21 91 chr10 106650795 106650840 -38938448 - MIR SINE MIR 0 262 215 1482 203 3 20 chr10 106650840 106651135 -38938153 - AluJo SINE Alu -8 304 15 1715 121 100 18 chr10 106651142 106651423 -38937865 - AluSq SINE Alu -8 305 2 713 231 21 91 chr10 106651423 106651611 -38937677 - MIR SINE MIR -53 209 38 417 300 123 18 chr10 106651674 106651844 -38937444 + MIR SINE MIR 2 189 -73 1692 176 28 10 chr10 106652201 106652491 -38936797 - AluJo SINE Alu -17 295 1 21 0 0 0 chr10 106652498 106652519 -38936769 + AT_rich Low_complexity Low_complexity 1 21 0 1528 120 18 9 chr10 106652530 106652747 -38936541 + AluSx SINE Alu 1 219 -93 1902 246 7 5 chr10 106652882 106653330 -38935958 - ERVL LTR ERVL -1219 4545 4097 2103 142 3 0 chr10 106653374 106653685 -38935603 + AluJb SINE Alu 1 312 0 513 301 13 7 chr10 106653713 106653866 -38935422 + HERV16 LTR ERVL 2690 2843 -2153 2173 130 0 0 chr10 106653870 106654171 -38935117 + AluSq SINE Alu 1 301 -12 602 255 57 13 chr10 106654488 106654645 -38934643 + MIR SINE MIR 2 165 -97 229 313 87 26 chr10 106654689 106654804 -38934484 - MIR3 SINE MIR -54 154 33 195 214 0 89 chr10 106654829 106654885 -38934403 + MIR SINE MIR 33 83 -179 746 165 0 0 chr10 106655827 106655942 -38933346 + FLAM_C SINE Alu 2 116 -17 25 0 0 0 chr10 106655942 106655967 -38933321 + AT_rich Low_complexity Low_complexity 1 25 0 2398 99 0 13 chr10 106655967 106656304 -38932984 + AluSg SINE Alu 1 310 0 2296 79 11 0 chr10 106658110 106658415 -38930873 + AluSc SINE Alu 1 308 0 2005 69 4 27 chr10 106658417 106658678 -38930610 + AluSx SINE Alu 1 255 -57 313 107 21 0 chr10 106658779 106658838 -38930450 - Alu SINE Alu -257 46 2 684 153 8 17 chr10 106658868 106658986 -38930302 + FLAM_C SINE Alu 11 127 -16 385 149 40 14 chr10 106659030 106659104 -38930184 + LTR23 LTR ERV1 118 193 -244 625 64 83 9 chr10 106659162 106659271 -38930017 + LTR23 LTR ERV1 187 303 -134 550 177 129 65 chr10 106659274 106659398 -38929890 + FLAM_C SINE Alu 1 132 -1 368 186 124 52 chr10 106659448 106659545 -38929743 + L2 LINE L2 3210 3313 0 22 0 0 0 chr10 106660177 106660199 -38929089 + GC_rich Low_complexity Low_complexity 1 22 0 2413 64 41 0 chr10 106661637 106661932 -38927356 - AluSc SINE Alu -2 307 1 950 111 29 6 chr10 106662048 106662220 -38927068 + CT-rich Low_complexity Low_complexity 2 177 0 1566 178 19 19 chr10 106662225 106662534 -38926754 - AluJb SINE Alu -3 309 1 876 244 90 4 chr10 106663046 106663280 -38926008 - MIR SINE MIR -6 256 3 2381 102 0 0 chr10 106663314 106663619 -38925669 + AluSx SINE Alu 1 305 -7 1427 279 76 27 chr10 106663643 106664130 -38925158 - MLT1J LTR MaLR 0 511 1 216 221 58 77 chr10 106664385 106664489 -38924799 + MIR SINE MIR 144 245 -17 2524 67 0 0 chr10 106664576 106664873 -38924415 + AluY SINE Alu 5 301 -10 34 0 0 0 chr10 106664943 106664977 -38924311 + AT_rich Low_complexity Low_complexity 1 34 0 539 158 0 0 chr10 106664977 106665059 -38924229 - AluJb SINE Alu -25 287 206 950 160 70 30 chr10 106665218 106665418 -38923870 + Charlie1b DNA MER1_type 1 208 -315 383 113 21 103 chr10 106665415 106665465 -38923823 + Charlie1b DNA MER1_type 430 470 -2291 * 2238 108 14 7 chr10 106665465 106665762 -38923526 - AluSx SINE Alu -13 299 1 383 113 21 103 chr10 106665762 106665808 -38923480 + Charlie1b DNA MER1_type 470 518 -5 2041 119 3 26 chr10 106666016 106666326 -38922962 - AluSx SINE Alu -9 303 1 327 154 39 87 chr10 106666455 106666559 -38922729 + MER113 DNA MER1_type? 297 395 -126 1372 201 38 45 chr10 106667162 106667338 -38921950 - AluJo SINE Alu 0 312 137 2111 75 29 0 chr10 106667338 106667617 -38921671 - AluSp SINE Alu -10 303 17 1372 201 38 45 chr10 106667617 106667754 -38921534 - AluJo SINE Alu -175 137 1 2539 86 0 3 chr10 106668851 106669164 -38920124 - AluSx SINE Alu 0 312 1 2033 145 0 10 chr10 106669519 106669822 -38919466 - AluSx SINE Alu -12 300 1 1998 142 10 26 chr10 106671531 106671841 -38917447 - AluJo SINE Alu -7 305 1 203 369 41 25 chr10 106671995 106672117 -38917171 + L2 LINE L2 3190 3313 0 195 333 11 21 chr10 106672182 106672275 -38917013 + MIR SINE MIR 46 137 -71 699 290 18 27 chr10 106672497 106672718 -38916570 + MIR SINE MIR 36 254 -8 2364 103 3 0 chr10 106672875 106673177 -38916111 + AluSp SINE Alu 1 303 -10 1226 183 35 16 chr10 106673179 106673436 -38915852 + MLT1E LTR MaLR 326 587 -6 2441 82 0 0 chr10 106673438 106673730 -38915558 + AluSx SINE Alu 3 294 -18 658 264 72 10 chr10 106673730 106673938 -38915350 - ERVL LTR ERVL -914 4850 4630 893 205 32 5 chr10 106673946 106674158 -38915130 - AluSp SINE Alu 0 319 103 1215 82 7 0 chr10 106674258 106674405 -38914883 + AluSp SINE Alu 82 229 -84 410 138 0 55 chr10 106674415 106674524 -38914764 + (GAAA)n Simple_repeat Simple_repeat 3 105 0 557 161 73 16 chr10 106674524 106674648 -38914640 - LTR23 LTR ERV1 -303 134 4 295 161 0 8 chr10 106674656 106674712 -38914576 + FLAM SINE Alu 73 115 -18 627 117 17 75 chr10 106674740 106674860 -38914428 + LTR23 LTR ERV1 118 230 -207 183 231 26 0 chr10 106674983 106675022 -38914266 + L2 LINE L2 3221 3260 -12 1698 97 0 4 chr10 106675441 106675668 -38913620 + AluSq SINE Alu 80 305 -8 2181 109 0 36 chr10 106675706 106676008 -38913280 + AluSx SINE Alu 1 291 -21 1947 120 40 0 chr10 106676047 106676323 -38912965 + AluSg SINE Alu 3 289 -21 563 295 95 20 chr10 106676325 106676525 -38912763 + MIR SINE MIR 4 218 -44 224 308 0 0 chr10 106676550 106676615 -38912673 + MIR SINE MIR 195 259 -3 881 90 0 0 chr10 106677268 106677379 -38911909 - AluSp SINE Alu -202 111 1 547 229 41 166 chr10 106677384 106677682 -38911606 - MLT1E LTR MaLR -272 321 75 2151 113 0 3 chr10 106677682 106677995 -38911293 + AluSx SINE Alu 1 312 0 547 229 41 166 chr10 106677995 106678062 -38911226 - MLT1E LTR MaLR -518 75 1 685 285 11 60 chr10 106678069 106678217 -38911071 + ERVL LTR ERVL 5098 5227 -537 2380 93 13 0 chr10 106678217 106678517 -38910771 + AluSx SINE Alu 5 308 -4 685 285 11 60 chr10 106678517 106678649 -38910639 + ERVL LTR ERVL 5227 5364 -400 336 80 0 40 chr10 106678743 106678793 -38910495 - MLT1A1 LTR MaLR 0 374 327 189 74 0 0 chr10 106678793 106678820 -38910468 + (CTG)n Simple_repeat Simple_repeat 2 28 0 771 185 0 0 chr10 106678840 106678959 -38910329 - FLAM_C SINE Alu -23 120 2 3750 203 22 79 chr10 106678985 106680012 -38909276 + LTR5 LTR ERVK 1 969 0 1789 160 10 10 chr10 106680013 106680325 -38908963 - MLT1A1 LTR MaLR -53 312 1 691 219 21 52 chr10 106680638 106680830 -38908458 + LTR41 LTR ERVL 1 186 -587 1191 157 0 4 chr10 106680853 106681065 -38908223 - AluJb SINE Alu -8 304 1 1182 237 122 59 chr10 106681144 106681604 -38907684 + LTR41 LTR ERVL 253 741 -32 2397 102 0 16 chr10 106681752 106681888 -38907400 + AluSx SINE Alu 1 138 -174 2295 82 11 0 chr10 106681888 106682190 -38907098 + AluSc SINE Alu 1 305 0 2397 102 0 16 chr10 106682190 106682367 -38906921 + AluSx SINE Alu 138 310 -2 340 89 0 0 chr10 106682370 106682415 -38906873 - MER57B LTR ERV1 -389 45 1 257 292 138 31 chr10 106682418 106682548 -38906740 - MIR SINE MIR -47 215 72 525 125 42 21 chr10 106682552 106682648 -38906640 - MLT1G LTR MaLR 0 590 493 2134 186 43 36 chr10 106682648 106683116 -38906172 - MER74A LTR ERVL 0 558 88 1734 154 22 39 chr10 106683118 106683478 -38905810 + AluJo SINE Alu 1 355 0 360 189 0 53 chr10 106683480 106683575 -38905713 - MER74B LTR ERVL -468 154 65 189 0 0 0 chr10 106683590 106683611 -38905677 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 1352 218 102 47 chr10 106683622 106683926 -38905362 - MLT1G LTR MaLR -93 497 164 1873 130 9 62 chr10 106683926 106684249 -38905039 - AluJb SINE Alu -4 308 3 1352 218 102 47 chr10 106684249 106684348 -38904940 - MLT1G LTR MaLR -426 164 72 214 246 35 35 chr10 106684385 106684442 -38904846 - MIR SINE MIR -192 70 14 929 186 31 0 chr10 106684612 106684806 -38904482 + MLT2B1 LTR ERVL 1 200 -320 2493 93 0 0 chr10 106684928 106685239 -38904049 + AluSx SINE Alu 2 312 0 354 179 13 77 chr10 106685585 106685663 -38903625 + MIR SINE MIR 75 147 -115 945 133 13 27 chr10 106685665 106685849 -38903439 - AluSg/x SINE Alu 0 313 132 2332 94 7 0 chr10 106685849 106686146 -38903142 - AluSx SINE Alu -13 299 1 510 248 23 39 chr10 106686146 106686275 -38903013 + MIR SINE MIR 136 262 0 659 274 75 1 chr10 106687055 106687259 -38902029 + MIR3 SINE MIR 32 259 -3 201 384 12 0 chr10 106687321 106687407 -38901881 + L2 LINE L2 3219 3305 -8 265 337 129 32 chr10 106687593 106687654 -38901634 + L2 LINE L2 2896 2950 -322 1155 201 139 98 chr10 106687654 106687910 -38901378 - LTR40c LTR ERVL 0 465 182 2259 117 3 0 chr10 106687910 106688210 -38901078 - AluSx SINE Alu -11 301 1 1155 201 139 98 chr10 106688210 106688400 -38900888 - LTR40c LTR ERVL -283 182 1 265 337 129 32 chr10 106688400 106688674 -38900614 + L2 LINE L2 2950 3264 -8 490 263 25 38 chr10 106689075 106689235 -38900053 + MIR3 SINE MIR 12 169 -39 2252 79 10 10 chr10 106689305 106689597 -38899691 - AluY SINE Alu -19 292 1 1194 79 0 0 chr10 106689597 106689737 -38899551 - AluY SINE Alu -171 140 1 323 158 18 0 chr10 106689747 106689804 -38899484 + MLT1H1 LTR MaLR 498 555 0 1881 154 10 3 chr10 106690230 106690522 -38898766 - AluJb SINE Alu -18 294 1 1996 145 3 22 chr10 106691022 106691339 -38897949 + AluJo SINE Alu 1 311 -1 2485 86 0 0 chr10 106691583 106691887 -38897401 - AluSg SINE Alu -6 304 1 23 0 0 0 chr10 106692073 106692096 -38897192 + AT_rich Low_complexity Low_complexity 1 23 0 1626 146 23 53 chr10 106693377 106693679 -38895609 + AluJo SINE Alu 1 293 -19 3236 162 141 35 chr10 106693680 106694025 -38895263 - MER4D LTR ERV1 0 872 565 339 25 0 0 chr10 106694025 106694065 -38895223 + (CA)n Simple_repeat Simple_repeat 1 40 0 3236 162 141 35 chr10 106694065 106694144 -38895144 - MER4D LTR ERV1 -307 565 496 2035 150 0 0 chr10 106694144 106694450 -38894838 - AluJb SINE Alu -6 306 1 3236 162 141 35 chr10 106694450 106694845 -38894443 - MER4D LTR ERV1 -376 496 2 195 42 0 0 chr10 106694845 106694869 -38894419 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 436 208 13 0 chr10 106695020 106695097 -38894191 + FRAM/FAM SINE Alu 1 73 -103 441 0 0 0 chr10 106695121 106695170 -38894118 + (TAAA)n Simple_repeat Simple_repeat 4 52 0 242 415 50 5 chr10 106695178 106695397 -38893891 - L2 LINE L2 -575 2739 2511 519 170 89 9 chr10 106695400 106695512 -38893776 + MIR SINE MIR 8 128 -134 2724 216 30 36 chr10 106695667 106695796 -38893492 - L1M4 LINE L1 -939 5207 5079 2052 109 6 58 chr10 106695796 106696107 -38893181 + AluSg SINE Alu 3 297 -13 2724 216 30 36 chr10 106696107 106696782 -38892506 - L1M4 LINE L1 -1067 5079 4408 813 160 0 0 chr10 106696790 106696915 -38892373 + FLAM_C SINE Alu 12 136 -7 1424 183 127 108 chr10 106696938 106697569 -38891719 - L1MDa LINE L1 -5709 831 26 1828 174 3 16 chr10 106697819 106698135 -38891153 + AluJb SINE Alu 1 312 0 532 173 43 14 chr10 106698175 106698314 -38890974 + MER96B DNA MER1_type? 194 336 -81 2290 96 7 3 chr10 106698314 106698607 -38890681 + AluSx SINE Alu 1 294 -18 448 250 0 0 chr10 106698607 106698707 -38890581 - MER96B DNA MER1_type? -312 105 6 263 282 58 19 chr10 106699070 106699173 -38890115 - MIR SINE MIR -39 223 117 1945 171 0 0 chr10 106699977 106700287 -38889001 + AluJo SINE Alu 1 310 -2 2019 103 7 51 chr10 106700297 106700623 -38888665 + AluSx SINE Alu 4 316 0 277 321 57 9 chr10 106700649 106700755 -38888533 - MIR3 SINE MIR -19 189 79 2292 83 59 0 chr10 106701801 106702091 -38887197 - AluSx SINE Alu -5 307 1 2234 119 0 0 chr10 106702826 106703121 -38886167 - AluSx SINE Alu -13 299 5 1024 147 58 0 chr10 106703266 106703457 -38885831 + AluSc SINE Alu 90 291 -18 2327 70 0 11 chr10 106703705 106704028 -38885260 - AluY SINE Alu 0 320 1 2310 113 0 0 chr10 106704028 106704329 -38884959 - AluY SINE Alu -10 301 1 1836 142 0 0 chr10 106704381 106704642 -38884646 - AluSx SINE Alu -1 311 51 1626 163 10 47 chr10 106704675 106704976 -38884312 - AluJb SINE Alu -22 290 1 2335 105 7 0 chr10 106705633 106705939 -38883349 - AluSx SINE Alu -3 309 2 191 377 104 0 chr10 106706198 106706381 -38882907 - MIR SINE MIR -14 248 47 1697 105 40 79 chr10 106706535 106706655 -38882633 + AluSx SINE Alu 1 124 -188 477 0 0 0 chr10 106706655 106706708 -38882580 + (CA)n Simple_repeat Simple_repeat 2 54 0 1697 105 40 79 chr10 106706708 106706863 -38882425 + AluSx SINE Alu 124 265 -47 2016 142 0 17 chr10 106706863 106707158 -38882130 + AluJo SINE Alu 1 290 -22 536 321 0 0 chr10 106707516 106707675 -38881613 + MIR SINE MIR 64 222 -40 232 239 45 68 chr10 106707693 106707781 -38881507 + MIR SINE MIR 166 251 -11 189 0 0 0 chr10 106707901 106707922 -38881366 + (TG)n Simple_repeat Simple_repeat 2 22 0 521 107 0 12 chr10 106707922 106707997 -38881291 - AluSp/q SINE Alu -13 300 225 849 111 111 0 chr10 106707998 106708124 -38881164 + FRAM SINE Alu 33 172 -4 1497 199 66 48 chr10 106708124 106708566 -38880722 - L1ME1 LINE L1 -119 6047 5598 396 0 0 0 chr10 106708605 106708649 -38880639 + (TG)n Simple_repeat Simple_repeat 2 45 0 267 261 0 0 chr10 106708674 106708743 -38880545 - L1 LINE L1 -2491 3655 3587 688 96 0 0 chr10 106708773 106708867 -38880421 + AluSq SINE Alu 6 99 -214 1226 125 16 21 chr10 106708928 106709120 -38880168 + AluSq SINE Alu 106 296 -17 537 278 133 79 chr10 106709413 106709766 -38879522 - MLT1J2 LTR MaLR -18 432 61 1271 150 11 9 chr10 106710314 106710335 -38878953 - L1MB7 LINE L1 -23 6148 6129 2281 121 0 0 chr10 106710335 106710640 -38878648 - AluSx SINE Alu -7 305 1 1271 150 11 9 chr10 106710640 106710845 -38878443 - L1MB7 LINE L1 -42 6129 5936 2360 86 3 10 chr10 106710845 106711148 -38878140 + AluSx SINE Alu 1 301 -11 1370 131 7 181 chr10 106711148 106711275 -38878013 - L1MB7 LINE L1 -534 5708 5561 1915 153 10 16 chr10 106711275 106711588 -38877700 + AluJb SINE Alu 1 311 -1 1370 131 7 181 chr10 106711588 106711880 -38877408 - L1MB7 LINE L1 -681 5561 5362 1771 125 66 7 chr10 106711981 106712253 -38877035 - AluSx SINE Alu -24 288 1 2108 131 13 19 chr10 106712255 106712569 -38876719 - AluJb SINE Alu 0 312 1 351 267 35 17 chr10 106713006 106713122 -38876166 + MIR SINE MIR 32 149 -59 2048 147 10 0 chr10 106713168 106713460 -38875828 + AluSx SINE Alu 1 295 -17 437 246 13 7 chr10 106714123 106714238 -38875050 + MIR3 SINE MIR 46 159 -49 366 147 162 0 chr10 106715641 106715709 -38873579 - AluJ/FLAM SINE Alu -222 80 2 567 46 58 0 chr10 106715709 106715796 -38873492 + L1MB3 LINE L1 6092 6183 0 817 263 82 4 chr10 106715843 106716075 -38873213 + MIR SINE MIR 3 252 -10 1793 192 10 0 chr10 106716261 106716568 -38872720 + AluJb SINE Alu 1 310 -2 237 204 204 19 chr10 106717182 106717290 -38871998 + MER103 DNA DNA 38 165 -1 23 0 0 0 chr10 106718253 106718276 -38871012 + GC_rich Low_complexity Low_complexity 1 23 0 26 0 0 0 chr10 106718320 106718346 -38870942 + GC_rich Low_complexity Low_complexity 1 26 0 222 264 0 23 chr10 106718966 106719053 -38870235 + (CGG)n Simple_repeat Simple_repeat 2 86 0 287 272 10 25 chr10 106719137 106719338 -38869950 + C-rich Low_complexity Low_complexity 1 197 0 245 247 94 0 chr10 106719910 106719995 -38869293 - MIR SINE MIR -53 209 117 1840 136 4 18 chr10 106720135 106720415 -38868873 - AluSx SINE Alu -36 276 1 216 281 174 50 chr10 106720617 106720738 -38868550 + L2 LINE L2 2956 3091 -181 779 161 0 0 chr10 106721139 106721257 -38868031 - FLAM_C SINE Alu -15 118 1 311 167 61 30 chr10 106721260 106721326 -38867962 - L1MCa LINE L1 -4363 2063 1996 1039 93 0 0 chr10 106721326 106721455 -38867833 - AluSg/x SINE Alu -12 300 172 1701 79 0 0 chr10 106721471 106721674 -38867614 - AluSx SINE Alu -93 219 17 532 285 0 21 chr10 106721727 106721871 -38867417 + MIR SINE MIR 1 141 -121 294 246 0 0 chr10 106721879 106721940 -38867348 - L2 LINE L2 -11 3302 3242 2384 67 3 0 chr10 106721951 106722256 -38867032 - AluY SINE Alu 0 306 1 350 317 0 0 chr10 106722274 106722378 -38866910 - MIR SINE MIR -13 249 146 1002 161 21 76 chr10 106722532 106722763 -38866525 + MLT1A2 LTR MaLR 155 501 -4 2364 102 6 6 chr10 106722835 106723148 -38866140 - AluSq SINE Alu 0 313 1 367 325 65 12 chr10 106723483 106723608 -38865680 - MIR SINE MIR -8 254 116 2384 104 0 0 chr10 106723608 106723915 -38865373 + AluSc SINE Alu 1 307 -2 367 325 65 12 chr10 106723915 106723958 -38865330 - MIR SINE MIR -146 116 77 884 165 0 17 chr10 106724283 106724459 -38864829 - MER96B DNA MER1_type? -242 175 3 2428 88 0 0 chr10 106725098 106725405 -38863883 + AluSc SINE Alu 1 307 -2 2248 123 0 3 chr10 106725414 106725716 -38863572 + AluSx SINE Alu 1 301 -11 293 258 22 0 chr10 106726039 106726128 -38863160 + L2 LINE L2 2631 2721 -593 238 279 66 124 chr10 106726256 106726650 -38862638 + L2 LINE L2 2827 3197 -75 224 273 143 13 chr10 106726729 106726806 -38862482 - MIR SINE MIR -155 107 21 23 33 0 0 chr10 106727079 106727109 -38862179 + GC_rich Low_complexity Low_complexity 1 30 0 530 187 179 15 chr10 106727973 106728107 -38861181 + MIR SINE MIR 11 166 -96 208 314 0 0 chr10 106728292 106728343 -38860945 - L2 LINE L2 0 3272 3222 923 99 16 0 chr10 106728430 106728551 -38860737 - FLAM_C SINE Alu -20 123 1 249 284 86 0 chr10 106728556 106728637 -38860651 - MIR SINE MIR -119 143 56 2287 116 3 10 chr10 106729752 106730063 -38859225 + AluSx SINE Alu 1 309 -3 353 315 22 28 chr10 106730602 106730783 -38858505 - MIR3 SINE MIR -6 202 23 2335 105 0 3 chr10 106731093 106731398 -38857890 + AluSq SINE Alu 1 304 -9 302 276 141 55 chr10 106731427 106731590 -38857698 + MIR SINE MIR 86 262 0 29 0 0 0 chr10 106732110 106732139 -38857149 + AT_rich Low_complexity Low_complexity 1 29 0 779 184 145 6 chr10 106732417 106732596 -38856692 + MER2 DNA MER2_type 7 210 -135 2886 16 3 3 chr10 106732637 106732955 -38856333 - AluYb8 SINE Alu 0 318 1 2478 62 7 0 chr10 106732958 106733250 -38856038 - AluSp SINE Alu -19 294 1 291 254 57 33 chr10 106733331 106733453 -38855835 - MIR SINE MIR -61 201 77 368 303 123 20 chr10 106733866 106734061 -38855227 - MIR SINE MIR -41 221 7 470 235 114 33 chr10 106734070 106734269 -38855019 + MIR SINE MIR 30 253 -4 648 222 23 28 chr10 106734295 106734471 -38854817 + MIR SINE MIR 24 198 -64 227 267 0 0 chr10 106734969 106735029 -38854259 + MIR SINE MIR 57 116 -146 2256 104 0 14 chr10 106735111 106735408 -38853880 + AluSg SINE Alu 5 297 -13 1140 143 0 77 chr10 106735511 106735549 -38853739 + AluJo SINE Alu 84 123 -189 1080 0 0 0 chr10 106735549 106735669 -38853619 + (CA)n Simple_repeat Simple_repeat 2 121 0 1140 143 0 77 chr10 106735669 106735826 -38853462 + AluJo SINE Alu 123 264 -48 236 71 48 0 chr10 106737751 106737793 -38851495 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 2108 116 25 0 chr10 106737797 106738072 -38851216 - AluSx SINE Alu -30 282 1 712 209 177 46 chr10 106738075 106738357 -38850931 - MER46C DNA MER2_type -1 337 19 502 335 170 0 chr10 106741041 106741259 -38848029 + L1ME LINE L1 5269 5523 -598 2347 91 0 28 chr10 106741260 106741580 -38847708 + AluSx SINE Alu 2 312 0 347 261 123 58 chr10 106741583 106741601 -38847687 + L1ME LINE L1 5598 5613 -508 1594 128 4 9 chr10 106741601 106741827 -38847461 + AluSg/x SINE Alu 85 309 -3 347 261 123 58 chr10 106741827 106741946 -38847342 + L1ME LINE L1 5613 5744 -377 2416 88 3 0 chr10 106742211 106742508 -38846780 + AluSg SINE Alu 3 300 -10 1825 134 7 49 chr10 106742596 106742928 -38846360 + AluSp SINE Alu 1 313 0 535 178 18 4 chr10 106742978 106743080 -38846208 - L1MD3 LINE L1 0 7995 7896 837 227 0 0 chr10 106743080 106743243 -38846045 - FRAM SINE Alu -2 164 2 535 178 18 4 chr10 106743243 106743285 -38846003 - L1MD3 LINE L1 -99 7896 7641 2389 79 3 0 chr10 106743404 106743694 -38845594 - AluSp SINE Alu -22 291 1 24 32 0 0 chr10 106744259 106744290 -38844998 + AT_rich Low_complexity Low_complexity 1 31 0 1888 170 23 0 chr10 106744350 106744650 -38844638 + AluJo SINE Alu 1 307 -5 2467 88 0 0 chr10 106745384 106745681 -38843607 + AluSx SINE Alu 1 297 -15 832 213 63 59 chr10 106745878 106745959 -38843329 - MIR SINE MIR -17 245 166 2031 149 0 0 chr10 106745959 106746254 -38843034 - AluJb SINE Alu -17 295 1 832 213 63 59 chr10 106746254 106746411 -38842877 - MIR SINE MIR -96 166 6 451 258 182 31 chr10 106746599 106746824 -38842464 - MIR SINE MIR 0 262 4 2240 113 0 0 chr10 106747170 106747461 -38841827 + AluSx SINE Alu 1 291 -21 295 288 25 12 chr10 106748390 106748470 -38840818 - MIR SINE MIR -170 92 12 23 33 0 0 chr10 106748758 106748788 -38840500 + AT_rich Low_complexity Low_complexity 1 30 0 2523 78 3 0 chr10 106748789 106749098 -38840190 + AluY SINE Alu 1 310 -1 2408 85 3 0 chr10 106749106 106749400 -38839888 + AluSq SINE Alu 1 295 -18 321 306 45 8 chr10 106749514 106749648 -38839640 - MIR SINE MIR 0 262 124 439 273 45 45 chr10 106750436 106750612 -38838676 + MER5A DNA MER1_type 13 188 -1 1162 134 67 67 chr10 106750652 106750832 -38838456 + AluJo SINE Alu 89 271 -41 2236 109 20 0 chr10 106750832 106751135 -38838153 - AluSx SINE Alu -3 309 1 1162 134 67 67 chr10 106751135 106751178 -38838110 + AluJo SINE Alu 270 312 0 430 211 61 0 chr10 106751383 106751497 -38837791 + MER103 DNA DNA 38 158 -8 375 336 14 58 chr10 106751812 106752035 -38837253 + L1ME LINE L1 52 264 -5855 189 311 81 47 chr10 106752194 106752342 -38836946 + L3 LINE CR1 1419 1571 -6 * 327 363 87 37 chr10 106752232 106752532 -38836756 + L1ME LINE L1 561 875 -5244 1698 141 14 28 chr10 106752543 106752827 -38836461 + AluJo SINE Alu 22 301 -11 708 213 138 113 chr10 106752827 106753023 -38836265 + L1MC5 LINE L1 7308 7498 -463 961 143 0 0 chr10 106753023 106753156 -38836132 + FLAM_C SINE Alu 1 133 0 708 213 138 113 chr10 106753156 106753388 -38835900 + L1MC5 LINE L1 7498 7758 -203 2665 44 0 13 chr10 106753388 106753703 -38835585 + AluY SINE Alu 1 311 0 708 213 138 113 chr10 106753703 106753866 -38835422 + L1MC5 LINE L1 7758 7915 -46 330 250 194 68 chr10 106753885 106754087 -38835201 + L1MB3 LINE L1 2876 3051 -3095 2447 82 0 0 chr10 106754087 106754378 -38834910 + AluSg SINE Alu 3 293 -17 2797 32 0 0 chr10 106754378 106754689 -38834599 + AluY SINE Alu 1 311 0 330 250 194 68 chr10 106754689 106754733 -38834555 + L1MB3 LINE L1 3050 3154 -2992 1932 117 7 16 chr10 106754741 106755049 -38834239 + L1M4c LINE L1 18 322 -6062 981 195 64 40 chr10 106755047 106755345 -38833943 + L1MB3 LINE L1 4025 4329 -1817 * 1952 156 3 10 chr10 106755345 106755640 -38833648 + AluJo SINE Alu 1 293 -19 4506 141 41 63 chr10 106755642 106756547 -38832741 + L1MB3 LINE L1 5198 6063 -120 2064 137 14 0 chr10 106756547 106756839 -38832449 + AluSx SINE Alu 1 296 -16 4506 141 41 63 chr10 106756839 106756955 -38832333 + L1MB3 LINE L1 6063 6180 -3 2195 113 7 0 chr10 106757146 106757447 -38831841 - AluSx SINE Alu -9 303 1 586 227 85 14 chr10 106757447 106757588 -38831700 - MLT1A2 LTR MaLR -222 152 2 1139 154 0 28 chr10 106757621 106757803 -38831485 + AluJo SINE Alu 120 296 -16 4827 217 65 38 chr10 106757836 106758649 -38830639 + L1MC4 LINE L1 6624 7414 -628 2287 95 0 3 chr10 106758649 106758945 -38830343 + AluSg SINE Alu 1 295 -15 4827 217 65 38 chr10 106758945 106759027 -38830261 + L1MC4 LINE L1 7414 7492 -550 2236 117 0 7 chr10 106759027 106759335 -38829953 + AluSq SINE Alu 1 306 -7 800 188 0 0 chr10 106759337 106759470 -38829818 + FLAM_C SINE Alu 1 133 0 4827 217 65 38 chr10 106759470 106759942 -38829346 + L1MC4 LINE L1 7492 8035 -7 1915 116 30 0 chr10 106759942 106760210 -38829078 + AluSq SINE Alu 1 276 -37 2153 135 3 0 chr10 106760370 106760666 -38828622 - AluSx SINE Alu -15 297 1 22 0 0 0 chr10 106760734 106760756 -38828532 + AT_rich Low_complexity Low_complexity 1 22 0 659 239 139 81 chr10 106761824 106762177 -38827111 + MLT1J2 LTR MaLR 1 383 -67 2191 127 0 7 chr10 106762177 106762485 -38826803 + AluSx SINE Alu 1 306 -6 659 239 139 81 chr10 106762485 106762541 -38826747 + MLT1J2 LTR MaLR 383 434 -16 2343 97 3 0 chr10 106762661 106762961 -38826327 - AluSx SINE Alu -9 303 3 1462 130 0 14 chr10 106763082 106763298 -38825990 + AluSg/x SINE Alu 91 303 -7 769 115 28 156 chr10 106763298 106763516 -38825772 - L1MB7 LINE L1 -235 5949 5760 2583 72 0 0 chr10 106763520 106763826 -38825462 - AluY SINE Alu -5 306 1 2208 127 0 0 chr10 106763830 106764129 -38825159 - AluSx SINE Alu -13 299 1 4072 111 31 49 chr10 106764137 106764826 -38824462 - L1MB3 LINE L1 0 6183 5506 2097 96 50 3 chr10 106764826 106765108 -38824180 - AluSg SINE Alu -15 295 1 4072 111 31 49 chr10 106765108 106765138 -38824150 - L1MB3 LINE L1 -677 5506 5477 259 259 147 59 chr10 106765138 106765308 -38823980 - L2 LINE L2 0 3313 3129 2197 142 11 62 chr10 106765322 106765357 -38823931 + L1PA15 LINE L1 5751 5786 -379 2053 147 0 10 chr10 106765357 106765671 -38823617 + AluJb SINE Alu 1 311 -1 2197 142 11 62 chr10 106765671 106766071 -38823217 + L1PA15 LINE L1 5786 6164 -1 2346 109 3 0 chr10 106766085 106766396 -38822892 + AluSx SINE Alu 1 312 0 1560 191 22 82 chr10 106766405 106766856 -38822432 + MLT1F LTR MaLR 119 542 0 2301 103 0 13 chr10 106767652 106767817 -38821471 - AluSx SINE Alu -14 298 137 2282 79 0 10 chr10 106767817 106768127 -38821161 - AluY SINE Alu 0 311 1 2301 103 0 13 chr10 106768127 106768263 -38821025 - AluSx SINE Alu -175 137 1 192 304 82 87 chr10 106768318 106768502 -38820786 + L2 LINE L2 3014 3196 -76 1112 152 32 92 chr10 106768539 106768604 -38820684 + AluJo SINE Alu 78 145 -167 2547 73 0 0 chr10 106768604 106768904 -38820384 + AluSc SINE Alu 1 300 -9 1112 152 32 92 chr10 106768904 106769088 -38820200 + AluJo SINE Alu 145 312 0 402 296 186 53 chr10 106769178 106769450 -38819838 - L2 LINE L2 0 3272 2945 2229 124 3 0 chr10 106769450 106769748 -38819540 + AluSq SINE Alu 5 303 -10 402 296 186 53 chr10 106769748 106769813 -38819475 - L2 LINE L2 -327 2945 2890 418 271 98 23 chr10 106770267 106770400 -38818888 - MIR SINE MIR 0 262 120 366 232 111 0 chr10 106770518 106770617 -38818671 - L1MD1 LINE L1 -9 6233 6124 323 219 0 47 chr10 106770629 106770693 -38818595 - L2 LINE L2 -26 3287 3227 * 423 276 210 11 chr10 106770663 106771120 -38818168 - L2 LINE L2 -1062 2252 1705 426 245 128 64 chr10 106771489 106771677 -38817611 + MIR SINE MIR 28 227 -35 228 256 0 0 chr10 106772954 106772997 -38816291 - L2 LINE L2 0 3313 3271 268 83 0 0 chr10 106773060 106773096 -38816192 - U2 snRNA snRNA -152 36 1 383 305 14 57 chr10 106773139 106773280 -38816008 - L2 LINE L2 -181 3091 2957 1394 135 161 56 chr10 106774157 106774424 -38814864 - AluJb SINE Alu -17 295 1 23 33 0 0 chr10 106774522 106774552 -38814736 + AT_rich Low_complexity Low_complexity 1 30 0 325 252 133 48 chr10 106774553 106774890 -38814398 - L1MC5 LINE L1 -207 7754 7389 5137 64 2 3 chr10 106776189 106776829 -38812459 + L1PA7 LINE L1 5514 6152 -2 2205 119 10 7 chr10 106776910 106777212 -38812076 + AluSx SINE Alu 7 309 -3 198 103 0 0 chr10 106777458 106777487 -38811801 + (TGG)n Simple_repeat Simple_repeat 1 29 0 24 0 0 0 chr10 106777566 106777590 -38811698 + AT_rich Low_complexity Low_complexity 1 24 0 540 264 57 52 chr10 106778348 106778541 -38810747 + MIR SINE MIR 34 227 -35 556 230 187 4 chr10 106779490 106779725 -38809563 - L2 LINE L2 -62 3251 2974 347 357 159 11 chr10 106780024 106780206 -38809082 - MIR SINE MIR -17 245 37 2344 83 0 19 chr10 106780221 106780533 -38808755 - AluSc SINE Alu -3 306 1 830 254 21 0 chr10 106780553 106780742 -38808546 + MIR SINE MIR 1 193 -69 325 250 23 11 chr10 106780955 106781043 -38808245 - MER5A DNA MER1_type -45 144 56 309 51 0 0 chr10 106781068 106781107 -38808181 + (TA)n Simple_repeat Simple_repeat 2 40 0 2264 112 3 0 chr10 106781107 106781402 -38807886 - AluSx SINE Alu -16 296 1 2698 193 129 50 chr10 106781402 106781735 -38807553 - L1MC4 LINE L1 -9 8033 7728 1954 158 3 7 chr10 106781735 106782033 -38807255 - AluJo SINE Alu -3 309 13 2698 193 129 50 chr10 106782033 106782885 -38806403 - L1MC4 LINE L1 -314 7728 6704 314 280 53 53 chr10 106782958 106783090 -38806198 - MIR SINE MIR -72 190 59 596 300 97 9 chr10 106784037 106784264 -38805024 - MIR SINE MIR 0 262 16 407 276 147 67 chr10 106785697 106785785 -38803503 - MIR SINE MIR -14 248 168 2130 144 0 6 chr10 106785785 106786097 -38803191 - AluJb SINE Alu -2 310 1 407 276 147 67 chr10 106786097 106786233 -38803055 - MIR SINE MIR -94 168 6 208 294 118 20 chr10 106786851 106786953 -38802335 - L2 LINE L2 -20 3252 3141 214 251 5 0 chr10 106786969 106787024 -38802264 - L2 LINE L2 -18 3295 3198 791 231 134 19 chr10 106787068 106787284 -38802004 - MIR SINE MIR 0 262 22 414 269 19 0 chr10 106787347 106787451 -38801837 - MIR SINE MIR -147 115 10 244 253 11 53 chr10 106787906 106788001 -38801287 - L2 LINE L2 -8 3264 3174 555 266 158 18 chr10 106788240 106788462 -38800826 + MIR SINE MIR 2 254 -8 2021 155 0 3 chr10 106788506 106788802 -38800486 + AluJo SINE Alu 1 295 -17 2601 78 0 0 chr10 106788807 106789116 -38800172 + AluSx SINE Alu 1 309 -3 338 291 39 24 chr10 106789832 106789959 -38799329 - L1M4 LINE L1 -3441 2705 2577 373 204 23 23 chr10 106789959 106790047 -38799241 + Charlie1 DNA MER1_type 1 88 -2673 * 582 200 62 0 chr10 106790031 106790161 -38799127 + Charlie1 DNA MER1_type 2144 2281 -480 1155 134 0 12 chr10 106790162 106790334 -38798954 + AluJo SINE Alu 1 170 -142 372 225 50 0 chr10 106790818 106790898 -38798390 + MIR SINE MIR 63 146 -116 234 240 147 13 chr10 106791087 106791126 -38798162 + MIR SINE MIR 112 144 -118 2316 111 0 10 chr10 106791126 106791433 -38797855 + AluSx SINE Alu 1 304 -8 234 240 147 13 chr10 106791433 106791468 -38797820 + MIR SINE MIR 144 196 -66 267 337 43 0 chr10 106792378 106792470 -38796818 + MIR3 SINE MIR 83 178 -30 520 233 227 6 chr10 106793026 106793198 -38796090 - MER63A DNA MER1_type 0 210 1 326 150 33 0 chr10 106795277 106795337 -38793951 + MER5A DNA MER1_type 20 81 -108 770 178 0 0 chr10 106795339 106795468 -38793820 + FLAM_C SINE Alu 5 133 -10 577 206 113 21 chr10 106795510 106795651 -38793637 + MER5B DNA MER1_type 24 177 -1 288 197 42 103 chr10 106796882 106797063 -38792225 - MLT1L LTR MaLR -244 287 71 355 266 278 0 chr10 106797176 106797345 -38791943 + MIR SINE MIR 47 262 0 205 196 54 36 chr10 106797366 106797422 -38791866 + L2 LINE L2 3214 3270 -2 1570 192 48 0 chr10 106797643 106797934 -38791354 - AluJb SINE Alu -2 310 6 514 213 263 0 chr10 106797941 106798101 -38791187 - MIR SINE MIR -54 208 7 728 273 77 0 chr10 106798838 106799032 -38790256 + MIR SINE MIR 53 261 -1 180 363 62 0 chr10 106799874 106799987 -38789301 - MIR SINE MIR -34 228 109 317 213 53 0 chr10 106800127 106800202 -38789086 + MIR SINE MIR 151 229 -33 201 238 0 0 chr10 106800449 106800491 -38788797 - L2 LINE L2 -8 3264 3223 22 0 0 0 chr10 106802605 106802627 -38786661 + AT_rich Low_complexity Low_complexity 1 22 0 1347 116 0 0 chr10 106802627 106802808 -38786480 + AluSg/x SINE Alu 123 303 -9 463 200 50 43 chr10 106802817 106802957 -38786331 + L1ME4a LINE L1 5981 6121 0 2522 67 7 0 chr10 106802965 106803265 -38786023 + AluSp SINE Alu 1 302 -11 22 0 0 0 chr10 106803454 106803476 -38785812 + AT_rich Low_complexity Low_complexity 1 22 0 1519 183 66 16 chr10 106805936 106806253 -38783035 + MLT1A1 LTR MaLR 25 357 -8 348 332 81 0 chr10 106806597 106806761 -38782527 + MIR SINE MIR 19 195 -63 2022 156 0 7 chr10 106806972 106807273 -38782015 + AluJb SINE Alu 1 299 -13 663 208 97 53 chr10 106807859 106808085 -38781203 - MIR SINE MIR -25 237 2 422 196 123 86 chr10 106808980 106809143 -38780145 - MER112 DNA MER1_type -91 169 1 251 282 86 67 chr10 106809313 106809522 -38779766 - Charlie8 DNA MER1_type -2018 399 187 1717 142 0 4 chr10 106810212 106810458 -38778830 - AluSx SINE Alu -25 287 43 527 128 0 0 chr10 106810459 106810537 -38778751 - AluS SINE Alu -233 79 2 581 269 37 65 chr10 106810625 106810841 -38778447 + MER58C DNA MER1_type 6 215 0 198 0 0 0 chr10 106810950 106810972 -38778316 + (T)n Simple_repeat Simple_repeat 1 22 0 2386 91 7 0 chr10 106812094 106812390 -38776898 - AluSx SINE Alu -14 298 1 416 177 44 62 chr10 106812391 106812504 -38776784 - L2 LINE L2 -7 3306 3196 372 22 0 0 chr10 106812563 106812608 -38776680 + (TG)n Simple_repeat Simple_repeat 2 46 0 304 322 98 17 chr10 106813384 106813558 -38775730 + MER5A DNA MER1_type 1 188 -1 279 114 0 0 chr10 106813735 106813779 -38775509 + (TC)n Simple_repeat Simple_repeat 1 44 0 2190 123 0 7 chr10 106813779 106814079 -38775209 - AluSx SINE Alu -14 298 1 1503 167 91 18 chr10 106814085 106814360 -38774928 - AluJb SINE Alu -17 295 1 542 322 137 0 chr10 106814363 106814574 -38774714 - L3 LINE CR1 -200 1377 1138 637 261 32 28 chr10 106814585 106814803 -38774485 - MIR SINE MIR -39 223 5 552 250 32 26 chr10 106814778 106814898 -38774390 - MIR SINE MIR -104 158 35 * 1369 197 10 47 chr10 106814898 106815197 -38774091 - AluJo SINE Alu -23 289 2 552 250 32 26 chr10 106815197 106815232 -38774056 - MIR SINE MIR -227 35 2 879 146 8 0 chr10 106815577 106815700 -38773588 - FLAM_C SINE Alu -19 124 1 971 235 135 82 chr10 106815788 106816328 -38772960 + MLT1L LTR MaLR 42 610 -5 2105 127 24 0 chr10 106816537 106816829 -38772459 - AluSx SINE Alu -13 299 1 688 223 87 11 chr10 106816834 106817018 -38772270 + MIR SINE MIR 47 244 -18 950 267 97 39 chr10 106818110 106818267 -38771021 - MLT1L LTR MaLR -21 594 448 2244 119 3 10 chr10 106818267 106818579 -38770709 - AluSp SINE Alu -1 312 3 950 267 97 39 chr10 106818579 106818937 -38770351 - MLT1L LTR MaLR -167 448 3 346 282 162 0 chr10 106819394 106819536 -38769752 + MIR SINE MIR 20 184 -78 511 184 16 109 chr10 106819845 106819888 -38769400 - L1ME3 LINE L1 0 6162 6117 2359 111 0 0 chr10 106819888 106820186 -38769102 - AluSx SINE Alu -14 298 1 511 184 16 109 chr10 106820186 106820337 -38768951 - L1ME3 LINE L1 -45 6117 5981 503 227 238 0 chr10 106821193 106821378 -38767910 + MER102a DNA MER1_type 92 320 -10 222 188 109 31 chr10 106821626 106821690 -38767598 + MER5A DNA MER1_type 2 70 -119 247 281 48 48 chr10 106822282 106822428 -38766860 + MER96 DNA MER1_type? 25 170 -5 826 207 18 0 chr10 106822527 106822696 -38766592 - MER5B DNA MER1_type -6 172 1 2086 121 24 0 chr10 106822802 106823092 -38766196 - AluSx SINE Alu -15 297 1 206 329 13 0 chr10 106823250 106823326 -38765962 - MIR SINE MIR -123 139 63 426 85 0 0 chr10 106823681 106823740 -38765548 + (CA)n Simple_repeat Simple_repeat 1 59 0 899 222 102 14 chr10 106824268 106824484 -38764804 + L1MEc LINE L1 36 270 -6126 * 1006 169 92 20 chr10 106824481 106824730 -38764558 + L1MEc LINE L1 1944 2210 -4186 223 293 67 0 chr10 106824796 106824871 -38764417 + MIR SINE MIR 106 185 -77 212 164 0 27 chr10 106825129 106825202 -38764086 + T-rich Low_complexity Low_complexity 2 72 0 282 164 49 0 chr10 106825205 106825266 -38764022 - L1MB5 LINE L1 0 6174 6111 1087 151 0 0 chr10 106825266 106825418 -38763870 + AluJb SINE Alu 3 154 -158 2154 118 42 37 chr10 106825532 106825902 -38763386 + Charlie1 DNA MER1_type 2328 2702 -59 2386 93 0 13 chr10 106825902 106826202 -38763086 - AluSx SINE Alu -16 296 1 2154 118 42 37 chr10 106826202 106826263 -38763025 + Charlie1 DNA MER1_type 2702 2761 0 303 311 34 19 chr10 106826265 106826471 -38762817 - L1M4 LINE L1 -3564 2582 2374 376 241 72 54 chr10 106826623 106826789 -38762499 + MIR SINE MIR 29 197 -65 191 298 57 48 chr10 106827005 106827129 -38762159 + MIR SINE MIR 97 221 -41 2519 77 0 0 chr10 106827305 106827604 -38761684 - AluSc SINE Alu -10 299 1 829 195 131 9 chr10 106828371 106828592 -38760696 + MIR SINE MIR 15 262 0 236 313 62 31 chr10 106828684 106828844 -38760444 + L2 LINE L2 2624 2788 -526 333 289 107 8 chr10 106828972 106829093 -38760195 + L2 LINE L2 3138 3270 -2 755 267 30 10 chr10 106829363 106829565 -38759723 - MIR SINE MIR -10 252 47 187 296 0 104 chr10 106829682 106829797 -38759491 - L2 LINE L2 -56 3257 3155 488 304 58 21 chr10 106829870 106830061 -38759227 + MIR SINE MIR 20 217 -45 211 272 120 0 chr10 106831035 106831127 -38758161 + MIR3 SINE MIR 55 157 -51 454 155 95 101 chr10 106832208 106832356 -38756932 - MIR SINE MIR -32 230 84 1891 167 0 3 chr10 106832489 106832776 -38756512 - AluJo SINE Alu -26 286 1 776 127 8 22 chr10 106832806 106832940 -38756348 - FLAM_C SINE Alu 0 133 2 348 24 0 0 chr10 106832942 106832983 -38756305 + (TTA)n Simple_repeat Simple_repeat 2 42 0 2233 106 0 0 chr10 106832983 106833265 -38756023 - AluSx SINE Alu -30 282 1 557 281 32 27 chr10 106833402 106833587 -38755701 - MIR SINE MIR -57 205 20 194 218 218 0 chr10 106834146 106834189 -38755099 + MIR SINE MIR 102 134 -128 2350 86 3 29 chr10 106834189 106834504 -38754784 + AluSq SINE Alu 1 307 -6 194 218 218 0 chr10 106834504 106834547 -38754741 + MIR SINE MIR 134 207 -55 602 185 76 19 chr10 106834597 106834744 -38754544 + MER3 DNA MER1_type 1 110 -73 1754 182 0 24 chr10 106834744 106835041 -38754247 - AluJo SINE Alu -22 290 1 602 185 76 19 chr10 106835041 106835055 -38754233 + MER3 DNA MER1_type 110 122 -61 1626 208 39 6 chr10 106835071 106835427 -38753861 - L1MB5 LINE L1 -10 6164 5797 365 171 0 0 chr10 106835427 106835497 -38753791 + MER3 DNA MER1_type 136 205 -4 381 301 48 57 chr10 106835696 106835925 -38753363 - MIR SINE MIR -35 227 1 251 347 8 8 chr10 106836512 106836633 -38752655 + CT-rich Low_complexity Low_complexity 1 121 0 1776 155 0 4 chr10 106836640 106836904 -38752384 - AluJb SINE Alu -49 263 1 323 259 23 69 chr10 106837235 106837366 -38751922 + MER94 DNA DNA 1 125 -9 188 224 41 0 chr10 106837653 106837702 -38751586 - MIR SINE MIR -67 141 91 2318 110 0 0 chr10 106837775 106838076 -38751212 + AluSx SINE Alu 1 301 -11 423 219 10 128 chr10 106838711 106838792 -38750496 + MIR3 SINE MIR 15 61 -147 2225 127 0 0 chr10 106838792 106839092 -38750196 - AluSx SINE Alu -12 300 1 423 219 10 128 chr10 106839092 106839206 -38750082 + MIR3 SINE MIR 61 187 -21 764 302 36 8 chr10 106839448 106839696 -38749592 + MIR SINE MIR 8 262 0 1341 176 191 103 chr10 106839827 106839973 -38749315 - MLT1F1 LTR MaLR -49 518 386 1932 146 9 43 chr10 106839973 106840296 -38748992 + AluJo SINE Alu 1 312 0 1341 176 191 103 chr10 106840296 106840625 -38748663 - MLT1F1 LTR MaLR -181 386 1 307 313 94 25 chr10 106840625 106840826 -38748462 - MIR SINE MIR -10 252 38 231 313 23 18 chr10 106840983 106841114 -38748174 + MIR SINE MIR 20 192 -70 192 288 190 12 chr10 106841848 106842011 -38747277 - L2 LINE L2 -9 3304 3113 396 269 110 21 chr10 106842264 106842409 -38746879 + MIR SINE MIR 22 179 -83 998 186 15 93 chr10 106842464 106842633 -38746655 - MLT1E1 LTR MaLR -3 651 509 2120 138 7 0 chr10 106842633 106842924 -38746364 + AluSx SINE Alu 3 295 -17 998 186 15 93 chr10 106842924 106843023 -38746265 - MLT1E1 LTR MaLR -145 509 404 401 178 0 11 chr10 106843023 106843113 -38746175 + CT-rich Low_complexity Low_complexity 1 89 0 615 107 0 0 chr10 106843140 106843224 -38746064 - AluJ/FLAM SINE Alu -227 85 2 367 150 12 12 chr10 106843239 106843319 -38745969 + CT-rich Low_complexity Low_complexity 4 83 0 1025 110 0 0 chr10 106843326 106843462 -38745826 - FLAM_C SINE Alu -2 141 6 436 194 11 15 chr10 106843530 106843713 -38745575 - MLT1E1 LTR MaLR -391 263 13 1180 170 73 129 chr10 106843718 106844154 -38745134 - MER97a DNA MER1_type? -63 831 423 2143 96 3 51 chr10 106844154 106844468 -38744820 - AluSx SINE Alu -13 299 1 1180 170 73 129 chr10 106844468 106844513 -38744775 - MER97a DNA MER1_type? -471 423 377 2496 163 38 39 chr10 106844520 106845091 -38744197 + L1MC2 LINE L1 5732 6333 0 1419 236 49 14 chr10 106845104 106845452 -38743836 - MER97b DNA MER1_type? -680 373 14 3138 132 36 11 chr10 106845587 106846141 -38743147 - L1MC1 LINE L1 -1 6332 5765 1006 234 52 31 chr10 106846141 106846427 -38742861 - MLT1L LTR MaLR -319 296 5 1844 131 4 15 chr10 106846440 106846707 -38742581 - AluJo SINE Alu -16 296 33 677 282 41 4 chr10 106847944 106848189 -38741099 - L1MEd LINE L1 -4971 1148 895 306 304 27 9 chr10 106848281 106848393 -38740895 - L1MEd LINE L1 -5266 853 740 713 270 4 9 chr10 106848469 106848695 -38740593 + L1MEd LINE L1 941 1165 -4954 678 296 107 16 chr10 106848879 106849197 -38740091 - MLT1J LTR MaLR -163 348 2 438 316 35 6 chr10 106849290 106849464 -38739824 - MER20B DNA MER1_type -604 179 1 531 228 8 16 chr10 106850158 106850285 -38739003 + MIR SINE MIR 36 161 -101 385 205 123 55 chr10 106851363 106851560 -38737728 - MIR SINE MIR -9 253 42 460 303 34 100 chr10 106851744 106852094 -38737194 - L2 LINE L2 -2 3311 2985 1514 133 115 43 chr10 106852238 106852517 -38736771 - AluJo SINE Alu -13 299 1 299 311 0 0 chr10 106852974 106853064 -38736224 - MER5A DNA MER1_type -96 93 4 241 294 168 42 chr10 106853064 106853105 -38736183 - L2 LINE L2 -557 2757 2724 2227 123 3 19 chr10 106853105 106853423 -38735865 + AluSq SINE Alu 1 313 0 241 294 168 42 chr10 106853423 106853582 -38735706 - L2 LINE L2 -590 2724 2530 1817 168 6 26 chr10 106853584 106853924 -38735364 - L1MB3 LINE L1 -2 6181 5849 278 152 0 0 chr10 106853926 106853972 -38735316 - L1MB3 LINE L1 -469 5714 5669 405 0 0 0 chr10 106854305 106854350 -38734938 + (GA)n Simple_repeat Simple_repeat 2 46 0 10234 35 16 90 chr10 106855026 106856522 -38732766 + SVA Other Other 1 1386 0 448 284 51 23 chr10 106856681 106856857 -38732431 - MIR SINE MIR -74 188 8 185 321 18 0 chr10 106857675 106857731 -38731557 + L2 LINE L2 3210 3266 -6 3753 268 83 18 chr10 106857839 106857872 -38731416 + L2 LINE L2 1456 1485 -1829 3483 25 0 0 chr10 106857872 106858268 -38731020 - L1PA3 LINE L1 -1 6154 5759 3753 268 83 18 chr10 106858268 106859172 -38730116 + L2 LINE L2 1485 2512 -802 1907 140 10 16 chr10 106859172 106859479 -38729809 - AluSx SINE Alu -7 305 1 3753 268 83 18 chr10 106859479 106859893 -38729395 + L2 LINE L2 2512 2897 -417 989 146 18 0 chr10 106859894 106860058 -38729230 - AluSg/x SINE Alu -2 308 142 288 238 119 113 chr10 106860414 106860630 -38728658 - HAL1 LINE L1 0 2507 2287 2353 91 0 0 chr10 106860630 106860939 -38728349 - AluSx SINE Alu -3 309 1 288 238 119 113 chr10 106860939 106861058 -38728230 - HAL1 LINE L1 -220 2287 2170 228 206 16 0 chr10 106861062 106861125 -38728163 - HAL1 LINE L1 -1 2506 2443 504 276 106 25 chr10 106861229 106861428 -38727860 + L2 LINE L2 3098 3312 -1 248 241 17 0 chr10 106861828 106861886 -38727402 - L2 LINE L2 -23 3290 3232 1469 117 5 0 chr10 106862241 106862447 -38726841 + AluSx SINE Alu 1 207 -105 378 179 0 145 chr10 106862550 106862695 -38726593 - L1 LINE L1 -1446 4700 4577 1030 227 122 65 chr10 106862755 106863139 -38726149 + MLT1J2 LTR MaLR 7 412 -38 393 295 18 0 chr10 106863558 106863670 -38725618 + MIR3 SINE MIR 81 194 -14 950 291 113 13 chr10 106863680 106863989 -38725299 - MER102b DNA MER1_type 0 341 2 252 132 59 0 chr10 106865140 106865208 -38724080 + CT-rich Low_complexity Low_complexity 5 76 0 332 326 94 1 chr10 106865678 106865822 -38723466 + MIR SINE MIR 19 178 -30 369 244 92 46 chr10 106865838 106865969 -38723319 + MIR SINE MIR 110 246 -16 183 355 28 28 chr10 106866702 106866809 -38722479 + MIR SINE MIR 59 165 -97 28 61 0 0 chr10 106867714 106867763 -38721525 + GC_rich Low_complexity Low_complexity 1 49 0 1843 154 27 0 chr10 106868787 106869079 -38720209 + AluJo SINE Alu 1 300 -12 2017 131 0 13 chr10 106869079 106869417 -38719871 + AluSq SINE Alu 1 313 0 311 271 153 42 chr10 106869529 106869673 -38719615 + MIR3 SINE MIR 18 177 -31 316 209 105 0 chr10 106869688 106869793 -38719495 - L1MC4 LINE L1 -1 8041 7926 2193 51 0 31 chr10 106869852 106870171 -38719117 + AluY SINE Alu 1 310 0 225 0 0 0 chr10 106870548 106870573 -38718715 + (A)n Simple_repeat Simple_repeat 1 25 0 2500 128 83 32 chr10 106870618 106870978 -38718310 + MSTA LTR MaLR 1 386 -42 1784 170 3 0 chr10 106870978 106871266 -38718022 - AluJb SINE Alu -23 289 1 2500 128 83 32 chr10 106871266 106871312 -38717976 + MSTA LTR MaLR 386 428 0 509 340 41 5 chr10 106871396 106871616 -38717672 + MIR SINE MIR 32 258 -4 1070 299 69 25 chr10 106871898 106872369 -38716919 - MLT1L LTR MaLR -6 609 12 785 271 180 22 chr10 106872659 106872996 -38716292 + L1ME3 LINE L1 5431 5858 -304 2036 112 20 0 chr10 106872996 106873291 -38715997 + AluSq SINE Alu 1 301 -12 785 271 180 22 chr10 106873291 106873403 -38715885 + L1ME3 LINE L1 5858 5951 -211 1551 183 24 10 chr10 106874063 106874352 -38714936 - AluJo SINE Alu -19 293 1 200 286 145 9 chr10 106874355 106874470 -38714818 - MIR SINE MIR -59 149 25 663 323 83 21 chr10 106874475 106874906 -38714382 + L2 LINE L2 2855 3312 -1 655 306 40 24 chr10 106875665 106875917 -38713371 + MIR SINE MIR 2 257 -5 531 323 26 5 chr10 106877212 106877407 -38711881 + MIR3 SINE MIR 1 199 -9 437 318 115 9 chr10 106877836 106878053 -38711235 - MIR SINE MIR -3 259 20 1030 251 66 62 chr10 106878955 106879200 -38710088 - L2 LINE L2 -49 3264 3022 1746 186 0 7 chr10 106879200 106879496 -38709792 + AluJb SINE Alu 1 294 -18 1030 251 66 62 chr10 106879496 106879887 -38709401 - L2 LINE L2 -291 3022 2623 333 0 0 0 chr10 106879887 106879924 -38709364 + (CACCAT)n Simple_repeat Simple_repeat 5 41 0 1030 251 66 62 chr10 106879924 106879937 -38709351 - L2 LINE L2 -690 2623 2612 318 329 77 7 chr10 106879954 106880097 -38709191 - MIR SINE MIR -32 230 78 288 331 15 56 chr10 106880103 106880369 -38708919 + L2 LINE L2 2804 3058 -214 383 247 53 34 chr10 106880731 106880891 -38708397 + MIR SINE MIR 17 180 -62 340 290 130 0 chr10 106881379 106881510 -38707778 - MIR3 SINE MIR -3 205 58 2031 138 3 0 chr10 106881566 106881877 -38707411 - AluSx SINE Alu 0 312 1 238 339 9 28 chr10 106882248 106882357 -38706931 - MER5B DNA MER1_type -69 109 3 230 266 51 38 chr10 106882922 106883001 -38706287 + MIR SINE MIR 23 102 -106 2084 118 0 32 chr10 106883256 106883570 -38705718 + AluSx SINE Alu 1 304 -8 1632 179 7 14 chr10 106883570 106883867 -38705421 + AluJb SINE Alu 1 295 -17 195 146 83 0 chr10 106883893 106883941 -38705347 + L2 LINE L2 3213 3264 -8 358 253 66 0 chr10 106883989 106884080 -38705208 - MIR3 SINE MIR -36 172 76 1209 114 0 6 chr10 106885055 106885230 -38704058 + AluSg/x SINE Alu 120 293 -17 387 0 0 0 chr10 106885270 106885313 -38703975 + (CA)n Simple_repeat Simple_repeat 2 44 0 1934 174 0 69 chr10 106885313 106885789 -38703499 + L1 LINE L1 4425 4867 -1279 253 326 167 46 chr10 106885868 106886282 -38703006 + L2 LINE L2 2809 3272 0 247 219 143 38 chr10 106886775 106886880 -38702408 + L2 LINE L2 3156 3271 -1 969 182 0 0 chr10 106886970 106887124 -38702164 - FRAM SINE Alu -12 154 1 429 319 0 0 chr10 106887222 106887335 -38701953 - MER81 DNA DNA 0 114 2 230 269 15 15 chr10 106887676 106887743 -38701545 - MIR3 SINE MIR -11 197 131 * 246 269 19 147 chr10 106887725 106887869 -38701419 - MER5A DNA MER1_type -5 184 61 701 191 7 7 chr10 106887869 106888005 -38701283 + MER5B DNA MER1_type 1 136 -42 1484 96 79 0 chr10 106888058 106888287 -38701001 - L1MA2 LINE L1 0 6304 6058 1630 139 4 4 chr10 106888300 106888559 -38700729 - AluJb SINE Alu -53 259 1 264 160 20 0 chr10 106888683 106888733 -38700555 + MER5B DNA MER1_type 4 54 -124 409 236 18 27 chr10 106888802 106888912 -38700376 + MER5B DNA MER1_type 69 177 -1 473 306 147 0 chr10 106888919 106889076 -38700212 + MER5A DNA MER1_type 4 183 -6 305 118 145 0 chr10 106889084 106889161 -38700127 - MIR3 SINE MIR -50 158 66 440 307 104 30 chr10 106890139 106890194 -38699094 - L2 LINE L2 -102 3211 3161 2906 130 11 23 chr10 106890194 106890633 -38698655 - Tigger2a DNA MER2_type 0 434 1 440 307 104 30 chr10 106890633 106891013 -38698275 - L2 LINE L2 -152 3161 2709 438 250 155 0 chr10 106891129 106891245 -38698043 + MIR SINE MIR 126 259 -3 536 207 7 43 chr10 106891556 106891696 -38697592 - MIR3 SINE MIR -63 145 11 382 325 219 6 chr10 106892380 106892549 -38696739 - MIR SINE MIR -12 250 46 294 324 42 5 chr10 106892600 106892764 -38696524 - MIR SINE MIR -56 206 38 691 265 53 11 chr10 106892942 106893163 -38696125 - MIR SINE MIR -14 248 17 348 179 90 0 chr10 106893215 106893293 -38695995 + L2 LINE L2 3188 3272 -41 285 151 0 0 chr10 106893524 106893577 -38695711 + (CAG)n Simple_repeat Simple_repeat 3 55 0 416 296 0 8 chr10 106894412 106894537 -38694751 + (TG)n Simple_repeat Simple_repeat 1 124 0 273 309 0 0 chr10 106894583 106894756 -38694532 + (TG)n Simple_repeat Simple_repeat 1 173 0 254 139 0 0 chr10 106896009 106896045 -38693243 + U2 snRNA snRNA 1 36 -152 241 135 0 0 chr10 106896096 106896133 -38693155 - L2 LINE L2 -19 3294 3258 * 474 242 186 25 chr10 106896132 106896293 -38692995 - MIR3 SINE MIR -6 202 16 808 227 116 0 chr10 106896764 106896971 -38692317 - MIR SINE MIR 0 262 32 239 229 115 0 chr10 106897911 106897972 -38691316 + MIR SINE MIR 109 176 -86 759 229 18 0 chr10 106897986 106898152 -38691136 - MER5B DNA MER1_type -9 169 1 1119 242 25 7 chr10 106898237 106898514 -38690774 + L1ME3A LINE L1 5880 6161 -9 207 0 0 0 chr10 106898637 106898660 -38690628 + (TG)n Simple_repeat Simple_repeat 1 23 0 466 261 179 0 chr10 106899443 106899650 -38689638 - MIR SINE MIR -14 248 5 183 42 0 0 chr10 106900518 106900542 -38688746 + (GCTG)n Simple_repeat Simple_repeat 4 27 0 487 283 98 22 chr10 106900935 106901119 -38688169 - MIR SINE MIR -35 227 30 413 284 17 0 chr10 106902067 106902183 -38687105 + MIR3 SINE MIR 90 207 -1 359 195 297 0 chr10 106902544 106902662 -38686626 - MIR SINE MIR 0 262 110 579 288 54 60 chr10 106902664 106902980 -38686308 + L2 LINE L2 2998 3311 -2 544 310 103 13 chr10 106903020 106903252 -38686036 + MIR SINE MIR 4 256 -6 560 317 121 0 chr10 106904079 106904303 -38684985 + MIR SINE MIR 12 262 0 330 226 184 54 chr10 106904375 106904543 -38684745 + MER102a DNA MER1_type 126 315 -15 216 0 0 0 chr10 106904848 106904872 -38684416 + (T)n Simple_repeat Simple_repeat 1 24 0 251 355 0 73 chr10 106904947 106905071 -38684217 + L2 LINE L2 3195 3309 -4 356 336 9 9 chr10 106905184 106905300 -38683988 + L2 LINE L2 3141 3256 -16 332 261 0 0 chr10 106905302 106905371 -38683917 + L2 LINE L2 3229 3297 -16 257 239 14 42 chr10 106905373 106905444 -38683844 + L2 LINE L2 3229 3297 -16 338 281 0 42 chr10 106905458 106905554 -38683734 + L2 LINE L2 3222 3313 0 297 239 22 33 chr10 106906656 106906748 -38682540 - MIR3 SINE MIR -29 179 89 180 289 26 13 chr10 106908338 106908414 -38680874 + MIR SINE MIR 53 129 -79 1390 272 104 60 chr10 106908419 106909512 -38679776 + L2 LINE L2 2073 3271 -1 354 301 71 57 chr10 106909641 106909977 -38679311 + L2 LINE L2 2868 3208 -64 286 267 30 53 chr10 106911738 106911869 -38677419 + MIR SINE MIR 18 145 -63 280 238 159 87 chr10 106912326 106912419 -38676869 - L2 LINE L2 0 3313 3207 1095 193 5 19 chr10 106912419 106912631 -38676657 + MER3 DNA MER1_type 1 209 0 280 238 159 87 chr10 106912631 106912663 -38676625 - L2 LINE L2 -106 3207 3179 237 228 25 51 chr10 106912767 106912846 -38676442 + MIR SINE MIR 20 96 -112 496 271 217 4 chr10 106912863 106913103 -38676185 - L2 LINE L2 -18 3295 3005 754 188 0 0 chr10 106913118 106913251 -38676037 + FLAM_A SINE Alu 1 133 0 2268 138 0 0 chr10 106914533 106914845 -38674443 - AluSx SINE Alu 0 312 1 2313 98 3 10 chr10 106915128 106915435 -38673853 - AluSp SINE Alu 0 313 9 265 195 146 0 chr10 106915551 106915633 -38673655 + MIR SINE MIR 60 153 -55 362 348 37 19 chr10 106915794 106915955 -38673333 - MIR SINE MIR -19 243 80 334 364 127 21 chr10 106916025 106916404 -38672884 - L2 LINE L2 -27 3245 2827 261 258 163 20 chr10 106916415 106916567 -38672721 - MIR3 SINE MIR -62 146 4 236 196 0 20 chr10 106917006 106917057 -38672231 + G-rich Low_complexity Low_complexity 1 50 0 336 253 52 60 chr10 106917841 106917990 -38671298 + L1ME4a LINE L1 5722 5867 -312 240 59 0 0 chr10 106917990 106918024 -38671264 + (CA)n Simple_repeat Simple_repeat 2 35 0 1799 161 33 0 chr10 106918031 106918305 -38670983 - AluJo SINE Alu -29 283 1 2506 87 3 0 chr10 106918553 106918863 -38670425 - AluSp SINE Alu -2 311 1 219 265 0 0 chr10 106918993 106919042 -38670246 + L2 LINE L2 3224 3272 0 356 226 129 0 chr10 106919103 106919196 -38670092 + L1ME4a LINE L1 6017 6121 0 223 329 65 24 chr10 106919229 106919399 -38669889 + L2 LINE L2 2917 3093 -179 700 305 47 4 chr10 106920382 106920615 -38668673 + MIR SINE MIR 17 259 -3 723 272 26 0 chr10 106920898 106921089 -38668199 + MIR SINE MIR 46 241 -21 250 261 52 22 chr10 106921096 106921230 -38668058 - L1ME4a LINE L1 -93 6028 5891 2505 209 83 62 chr10 106921451 106922237 -38667051 - L1MD1 LINE L1 -2 6240 5439 384 205 60 86 chr10 106922239 106922293 -38666995 - MER106A DNA MER1_type -89 147 93 2004 139 0 17 chr10 106922293 106922594 -38666694 - AluJb SINE Alu -16 296 1 384 205 60 86 chr10 106922594 106922605 -38666683 - MER106A DNA MER1_type -143 93 83 528 16 0 0 chr10 106922605 106922666 -38666622 + (TA)n Simple_repeat Simple_repeat 2 62 0 384 205 60 86 chr10 106922666 106922750 -38666538 - MER106A DNA MER1_type -153 83 1 265 281 11 22 chr10 106923365 106923488 -38665800 + GA-rich Low_complexity Low_complexity 1 121 0 451 246 77 28 chr10 106924227 106924420 -38664868 - MIR SINE MIR -48 214 18 322 370 43 16 chr10 106925317 106925501 -38663787 + L2 LINE L2 3117 3305 -8 244 308 153 38 chr10 106926076 106926475 -38662813 - L2 LINE L2 -5 3267 2823 658 223 21 42 chr10 106927865 106928058 -38661230 - MER5A DNA MER1_type 0 189 1 306 196 103 10 chr10 106928243 106928340 -38660948 - MER103 DNA DNA -18 148 43 279 282 145 10 chr10 106930044 106930200 -38659088 - MIR3 SINE MIR -57 151 3 580 216 155 0 chr10 106930245 106930393 -38658895 + MIR SINE MIR 49 219 -43 225 241 35 0 chr10 106931161 106931219 -38658069 + MIR SINE MIR 190 249 -13 931 216 24 24 chr10 106931290 106931503 -38657785 - MER20 DNA MER1_type 0 219 7 1530 135 9 5 chr10 106932580 106932828 -38656460 - AluSg/x SINE Alu 0 310 70 533 324 44 28 chr10 106933340 106933884 -38655404 + L2 LINE L2 2702 3310 -3 312 292 51 0 chr10 106935454 106935591 -38653697 - L2 LINE L2 -208 3064 2921 188 306 14 28 chr10 106935761 106935833 -38653455 + L2 LINE L2 3243 3313 0 320 331 58 0 chr10 106936830 106936969 -38652319 + L1MC1 LINE L1 5732 5878 -1930 533 227 38 0 chr10 106937504 106937636 -38651652 + MIR3 SINE MIR 13 149 -59 944 166 16 3 chr10 106937674 106937872 -38651416 + L1M2 LINE L1 5431 5632 -548 499 227 47 20 chr10 106938015 106938165 -38651123 + MIR SINE MIR 108 261 -1 403 369 6 6 chr10 106938233 106938412 -38650876 - L3 LINE CR1 -792 785 607 236 206 0 96 chr10 106939099 106939172 -38650116 - MER5A DNA MER1_type -122 67 2 593 270 50 54 chr10 106939432 106939673 -38649615 + MIR SINE MIR 18 257 -5 292 246 31 0 chr10 106939798 106939863 -38649425 - L2 LINE L2 0 3313 3247 1058 165 5 11 chr10 106939936 106940124 -38649164 - MER5A DNA MER1_type 0 189 3 196 53 53 0 chr10 106940476 106940514 -38648774 + T-rich Low_complexity Low_complexity 2 41 0 418 218 0 23 chr10 106941553 106941640 -38647648 - AluJ/FLAM SINE Alu -225 87 3 309 135 0 108 chr10 106941909 106941983 -38647305 - L1MC5 LINE L1 -26 7935 7870 24 0 0 0 chr10 106942296 106942320 -38646968 + AT_rich Low_complexity Low_complexity 1 24 0 444 361 198 16 chr10 106942426 106942855 -38646433 + L3 LINE CR1 252 758 -819 2159 141 23 3 chr10 106943191 106943539 -38645749 + MER68 LTR ERV1 24 378 -184 2223 131 19 150 chr10 106943539 106944065 -38645223 - LTR32 LTR ERVL 0 471 15 697 199 102 0 chr10 106944064 106944230 -38645058 + MER68 LTR ERV1 373 555 -7 * 608 195 208 0 chr10 106944739 106944898 -38644390 + L1MC1 LINE L1 6093 6284 -49 548 219 38 0 chr10 106945261 106945366 -38643922 - LTR32 LTR ERVL 0 471 363 785 259 65 30 chr10 106945762 106945994 -38643294 + MIR SINE MIR 17 256 -6 1539 186 3 66 chr10 106946278 106946595 -38642693 + AluJb SINE Alu 1 297 -15 464 230 182 0 chr10 106947006 106947171 -38642117 + MIR SINE MIR 58 252 -10 337 240 25 41 chr10 106947811 106947932 -38641356 - MIR SINE MIR -128 134 16 215 317 77 10 chr10 106948220 106948324 -38640964 + MIR SINE MIR 117 227 -35 866 201 109 21 chr10 106948389 106948723 -38640565 + MLT1C LTR MaLR 1 466 -1 353 276 82 3 chr10 106949596 106949764 -38639524 + MIR SINE MIR 10 187 -42 373 282 34 8 chr10 106950709 106950826 -38638462 - MER5A DNA MER1_type -3 186 67 1145 153 0 0 chr10 106950827 106950997 -38638291 - AluSq SINE Alu -3 310 141 2385 78 0 0 chr10 106951003 106951320 -38637968 - AluY SINE Alu 0 319 3 383 309 158 7 chr10 106951413 106951565 -38637723 - MER5A DNA MER1_type -6 183 9 396 0 0 0 chr10 106953102 106953146 -38636142 + (TC)n Simple_repeat Simple_repeat 2 45 0 279 162 135 27 chr10 106953192 106953277 -38636011 - MIR SINE MIR -56 206 111 270 137 20 0 chr10 106953394 106953445 -38635843 - L2 LINE L2 0 3313 3262 724 289 18 31 chr10 106953470 106953698 -38635590 - MIR SINE MIR -1 261 37 2360 101 41 14 chr10 106954316 106954681 -38634607 + THE1C LTR MaLR 1 375 0 180 0 0 0 chr10 106955018 106955038 -38634250 + (TCTCC)n Simple_repeat Simple_repeat 2 21 0 315 331 35 0 chr10 106955042 106955184 -38634104 + L2 LINE L2 1875 2021 -1293 721 197 8 0 chr10 106955487 106955619 -38633669 - FLAM_C SINE Alu 0 133 1 303 200 0 14 chr10 106955679 106955749 -38633539 + LTR47B LTR ERVL 304 372 -71 383 286 214 7 chr10 106955898 106956052 -38633236 + MER5A DNA MER1_type 4 189 0 497 259 106 25 chr10 106957538 106957756 -38631532 + MIR SINE MIR 3 234 -28 274 197 70 28 chr10 106958335 106958406 -38630882 + MIR3 SINE MIR 110 183 -25 198 0 0 0 chr10 106958669 106958691 -38630597 + (GA)n Simple_repeat Simple_repeat 2 23 0 235 301 161 15 chr10 106959946 106960146 -38629142 - MIR SINE MIR -19 243 12 408 206 37 9 chr10 106960836 106960943 -38628345 + MIR SINE MIR 42 151 -57 188 298 64 11 chr10 106961929 106962023 -38627265 - MIR SINE MIR -43 219 121 300 330 50 0 chr10 106963325 106963425 -38625863 + MER91C DNA MER1_type 1 105 -35 186 147 0 0 chr10 106963558 106963592 -38625696 + L2 LINE L2 3278 3311 -2 266 294 135 24 chr10 106964064 106964190 -38625098 - L2 LINE L2 -4 3309 3170 2147 111 19 32 chr10 106964332 106964647 -38624641 - AluSx SINE Alu -1 311 1 191 182 73 55 chr10 106964847 106964902 -38624386 - L2 LINE L2 -186 3086 3031 425 269 156 25 chr10 106965150 106965310 -38623978 + MER5A DNA MER1_type 9 189 0 1358 155 112 40 chr10 106965325 106965602 -38623686 - AluJo SINE Alu -15 297 1 1070 134 5 65 chr10 106965996 106966197 -38623091 - MER5A DNA MER1_type 0 189 1 369 331 11 17 chr10 106966211 106966386 -38622902 + MIR SINE MIR 46 219 -43 736 156 84 67 chr10 106966623 106966802 -38622486 - MER5A DNA MER1_type -7 182 1 563 355 14 0 chr10 106966958 106967178 -38622110 + MIR SINE MIR 40 262 0 338 146 0 0 chr10 106968407 106968462 -38620826 + L2 LINE L2 3218 3272 0 264 361 33 0 chr10 106968450 106968572 -38620716 + MIR3 SINE MIR 7 132 -76 * 354 326 45 8 chr10 106970130 106970262 -38619026 + MIR SINE MIR 87 223 -39 339 286 16 28 chr10 106970386 106970536 -38618752 + (TGAG)n Simple_repeat Simple_repeat 1 150 -30 2010 134 3 17 chr10 106970536 106970834 -38618454 + AluJo SINE Alu 1 294 -18 339 286 16 28 chr10 106970834 106970865 -38618423 + (TGAG)n Simple_repeat Simple_repeat 150 180 0 312 263 29 29 chr10 106970882 106971053 -38618235 + (TGAG)n Simple_repeat Simple_repeat 2 172 0 412 195 52 35 chr10 106971346 106971520 -38617768 + (TGAG)n Simple_repeat Simple_repeat 2 178 0 292 333 153 0 chr10 106972002 106972152 -38617136 + MIR SINE MIR 20 192 -70 1258 190 11 83 chr10 106972192 106972555 -38616733 - MER46C DNA MER2_type 0 338 2 505 238 38 19 chr10 106973041 106973201 -38616087 - MER103 DNA DNA -3 163 1 484 279 118 10 chr10 106974184 106974388 -38614900 - MIR SINE MIR 0 262 37 580 191 108 6 chr10 106975358 106975515 -38613773 + MIR SINE MIR 77 249 -13 301 339 71 0 chr10 106975804 106975931 -38613357 - MIR SINE MIR -48 214 79 348 270 10 0 chr10 106976265 106976365 -38612923 - MER5A DNA MER1_type -80 109 9 1274 285 87 27 chr10 106976579 106977381 -38611907 + L1MC4a LINE L1 5092 5368 -778 181 232 36 18 chr10 106977386 106977442 -38611846 + L2 LINE L2 3257 3313 0 953 226 228 14 chr10 106978091 106978576 -38610712 - L2 LINE L2 -5 3308 2714 394 195 35 0 chr10 106978572 106978659 -38610629 - MIR SINE MIR -121 141 52 * 215 273 83 41 chr10 106979225 106979346 -38609942 - L2 LINE L2 -4 3309 3184 480 189 151 0 chr10 106979396 106979502 -38609786 + L2 LINE L2 3192 3313 0 584 247 48 0 chr10 106979563 106979729 -38609559 - MER5B DNA MER1_type -1 177 4 855 221 52 12 chr10 106980856 106981105 -38608183 + MIR SINE MIR 4 262 0 550 199 173 19 chr10 106981168 106981324 -38607964 + MER5A DNA MER1_type 4 183 -6 267 310 129 0 chr10 106981325 106981441 -38607847 + L2 LINE L2 3183 3313 0 186 222 32 0 chr10 106981551 106981614 -38607674 - L2 LINE L2 -700 2614 2550 400 205 9 137 chr10 106982470 106982684 -38606604 - MIR SINE MIR -50 212 30 1161 245 48 52 chr10 106982883 106983360 -38605928 + L2 LINE L2 2838 3312 -1 320 265 174 16 chr10 106984131 106984336 -38604952 - MIR SINE MIR -33 229 1 262 278 42 0 chr10 106984519 106984591 -38604697 + MIR3 SINE MIR 86 160 -48 363 341 11 81 chr10 106985552 106985813 -38603475 + L2 LINE L2 3030 3272 0 616 285 18 0 chr10 106985863 106986028 -38603260 - MIR SINE MIR -20 242 75 244 339 64 35 chr10 106986404 106986575 -38602713 + MIR SINE MIR 46 221 -41 901 293 178 38 chr10 106986633 106987717 -38601571 + L2 LINE L2 1631 2866 -448 482 282 84 0 chr10 106987915 106988057 -38601231 + L2 LINE L2 3159 3312 -1 216 298 0 0 chr10 106988351 106988408 -38600880 - MIR SINE MIR -19 243 187 1976 161 3 19 chr10 106988534 106988850 -38600438 + AluJb SINE Alu 1 311 -1 190 265 132 0 chr10 106989317 106989385 -38599903 - MIR SINE MIR -61 147 71 989 213 37 0 chr10 106989426 106989642 -38599646 + MER58A DNA MER1_type 1 224 0 2175 120 0 13 chr10 106989895 106990203 -38599085 + AluSq SINE Alu 1 304 -9 1365 246 89 72 chr10 106990304 106990807 -38598481 + MLT1H1 LTR MaLR 1 518 -37 259 202 96 43 chr10 106991741 106991835 -38597453 + L2 LINE L2 3168 3266 -6 239 293 80 44 chr10 106992061 106992286 -38597002 - MLT1K LTR MaLR -144 444 212 345 239 0 0 chr10 106993321 106993392 -38595896 - LTR47B LTR ERVL -1 442 372 852 229 14 0 chr10 106993496 106993710 -38595578 + L1MC/D LINE L1 5066 5282 -864 5140 125 42 2 chr10 106993718 106994634 -38594654 - L1PA16 LINE L1 0 6166 5200 2807 156 47 4 chr10 106994636 106995163 -38594125 + L1MC/D LINE L1 5260 5809 -535 2733 226 74 15 chr10 106995265 106996032 -38593256 + MSTD-int LTR MaLR 799 1721 -14 1652 130 154 12 chr10 106996046 106996391 -38592897 + MSTD LTR MaLR 1 394 -2 970 215 106 60 chr10 106997047 106997461 -38591827 - LTR8A LTR ERV1 -7 720 288 281 268 125 92 chr10 106997518 106997790 -38591498 - MER87 LTR ERV1 -398 143 1 616 302 88 34 chr10 106998170 106998557 -38590731 - L1MC/D LINE L1 -1999 5809 5402 2563 71 0 0 chr10 106998727 106999038 -38590250 - AluY SINE Alu 0 311 1 810 134 0 8 chr10 106999040 106999174 -38590114 - AluJb SINE Alu -8 304 172 4125 91 22 3 chr10 107000666 107001262 -38588026 + HERV17 LTR ERV1 868 1474 -7152 * 6011 56 5 1 chr10 107001233 107002003 -38587285 + HERV17 LTR ERV1 2490 3262 -5364 238 224 66 13 chr10 107002103 107002179 -38587109 + L2 LINE L2 3225 3304 -9 1882 165 31 3 chr10 107002247 107002538 -38586750 + AluJb SINE Alu 1 299 -13 1215 215 60 10 chr10 107002555 107002857 -38586431 - MER58B DNA MER1_type -24 317 1 964 226 49 19 chr10 107003466 107003731 -38585557 - MER4D LTR ERV1 0 903 631 602 174 0 0 chr10 107003734 107003843 -38585445 - AluJb SINE Alu -12 300 192 339 208 0 0 chr10 107003847 107003919 -38585369 - LTR39 LTR ERV1 -320 463 392 968 177 39 33 chr10 107003958 107004181 -38585107 - MER49 LTR ERV1 -629 294 21 1811 157 50 0 chr10 107004181 107004462 -38584826 - AluSx SINE Alu -17 295 1 968 177 39 33 chr10 107004462 107004484 -38584804 - MER49 LTR ERV1 -902 21 1 2190 111 24 3 chr10 107004535 107004833 -38584455 - AluSx SINE Alu -3 309 6 2242 114 0 7 chr10 107005968 107006267 -38583021 - AluSq SINE Alu -16 297 1 1194 223 28 28 chr10 107006724 107006840 -38582448 + L1M4 LINE L1 3634 3749 -2397 2461 92 3 0 chr10 107006840 107007146 -38582142 + AluSx SINE Alu 1 307 -5 1194 223 28 28 chr10 107007146 107007356 -38581932 + L1M4 LINE L1 3748 3960 -2186 2315 119 0 0 chr10 107007356 107007668 -38581620 + AluSq SINE Alu 1 312 -1 2028 121 3 3 chr10 107008333 107008615 -38580673 - AluSc SINE Alu -26 283 2 2378 102 3 0 chr10 107009151 107009456 -38579832 - AluSq SINE Alu -5 308 3 994 83 41 14 chr10 107009618 107009763 -38579525 - LTR17 LTR ERV1 -376 404 256 1496 218 66 83 chr10 107010159 107010782 -38578506 + LTR9 LTR ERV1 1 612 0 2479 93 0 3 chr10 107011890 107012203 -38577085 - AluSx SINE Alu 0 312 1 1005 135 31 72 chr10 107012203 107012425 -38576863 + THE1C LTR MaLR 163 375 0 199 213 0 43 chr10 107012425 107012472 -38576816 - MIR SINE MIR -70 192 148 207 0 0 0 chr10 107012482 107012505 -38576783 + (A)n Simple_repeat Simple_repeat 1 23 0 389 158 49 0 chr10 107012516 107012598 -38576690 - L1MA8 LINE L1 -4 6287 6202 1121 179 0 6 chr10 107012604 107012822 -38576466 - L1M3 LINE L1 -432 5739 5526 184 262 16 33 chr10 107013107 107013168 -38576120 - L3 LINE CR1 -115 1462 1403 353 312 41 61 chr10 107013287 107013582 -38575706 + L3 LINE CR1 951 1239 -338 1729 132 6 95 chr10 107013716 107014042 -38575246 - AluSx SINE Alu -15 297 1 7608 138 27 6 chr10 107014050 107015302 -38573986 - L1MC3 LINE L1 -1 7784 6507 200 308 154 10 chr10 107015308 107015412 -38573876 + L3 LINE CR1 1346 1464 -113 2149 107 20 10 chr10 107015872 107016171 -38573117 - AluSg SINE Alu -8 302 1 275 282 43 43 chr10 107016479 107016596 -38572692 + MER5A DNA MER1_type 50 166 -23 * 357 290 28 28 chr10 107016491 107016598 -38572690 - MER5A DNA MER1_type -50 139 33 249 222 244 0 chr10 107016646 107016736 -38572552 - MER94 DNA DNA -20 114 3 2354 224 107 22 chr10 107017429 107018450 -38570838 + L2 LINE L2 2116 3275 -38 583 283 109 43 chr10 107018498 107018866 -38570422 + L1MB3 LINE L1 5266 5657 -464 2601 144 5 2 chr10 107018897 107019320 -38569968 + L1MB3 LINE L1 5753 6176 -7 4027 143 108 14 chr10 107019477 107020202 -38569086 + MER54B LTR ERVL 1 793 0 598 270 46 4 chr10 107020238 107020475 -38568813 + L1ME4a LINE L1 5677 5923 -198 300 156 88 167 chr10 107020490 107020682 -38568606 + MER104 DNA Tc2 1 177 -3 266 176 0 27 chr10 107020744 107020818 -38568470 + L1ME4a LINE L1 6050 6121 0 186 350 38 25 chr10 107021178 107021338 -38567950 + L2 LINE L2 1846 2007 -1307 282 294 0 47 chr10 107022545 107022737 -38566551 + G-rich Low_complexity Low_complexity 1 183 0 243 284 20 20 chr10 107023273 107023375 -38565913 - MER91A DNA MER1_type -32 164 63 497 272 8 131 chr10 107023942 107024210 -38565078 + MIR SINE MIR 15 249 -13 384 215 140 22 chr10 107025776 107025940 -38563348 + MER5A DNA MER1_type 4 189 0 208 307 0 23 chr10 107025946 107026034 -38563254 + MIR SINE MIR 64 149 -113 377 340 112 0 chr10 107026278 107026563 -38562725 + L2 LINE L2 2967 3283 -30 303 296 23 0 chr10 107026898 107026986 -38562302 + MER5A DNA MER1_type 79 168 -21 694 208 22 49 chr10 107027293 107027476 -38561812 + MER5B DNA MER1_type 1 178 0 534 283 94 0 chr10 107027683 107027874 -38561414 + MIR SINE MIR 48 256 -6 1655 267 85 26 chr10 107028830 107029560 -38559728 - L1ME4a LINE L1 -2 6119 5347 226 262 33 0 chr10 107030925 107030986 -38558302 - MIR SINE MIR -124 138 76 1229 299 40 30 chr10 107031871 107032372 -38556916 - MARNA DNA Mariner -11 575 70 356 278 21 28 chr10 107032377 107032521 -38556767 - LTR67 LTR ERVL -4 553 411 416 336 118 0 chr10 107034396 107034607 -38554681 + MIR SINE MIR 20 255 -7 500 212 95 22 chr10 107035287 107035424 -38553864 + L2 LINE L2 3165 3311 -2 2263 104 13 0 chr10 107036064 107036363 -38552925 + AluSx SINE Alu 1 303 -9 1972 164 113 43 chr10 107036449 107036895 -38552393 + MLT2B1 LTR ERVL 1 516 -38 1858 132 42 71 chr10 107036916 107037267 -38552021 - MER7A DNA MER2_type -1 345 5 475 276 0 46 chr10 107037329 107037481 -38551807 - MIR SINE MIR -93 169 25 205 230 11 81 chr10 107037515 107037602 -38551686 + CT-rich Low_complexity Low_complexity 5 85 0 353 250 83 19 chr10 107038299 107038407 -38550881 + L2 LINE L2 3158 3272 0 796 182 8 0 chr10 107038604 107038736 -38550552 + FLAM_C SINE Alu 1 133 0 1455 165 14 46 chr10 107038768 107039087 -38550201 + AluJo SINE Alu 21 312 0 380 210 80 0 chr10 107039212 107039312 -38549976 - MIR SINE MIR -7 255 148 4739 107 31 4 chr10 107039982 107040694 -38548594 + L1MA8 LINE L1 5561 6291 0 230 202 202 36 chr10 107041354 107041438 -38547850 - L2 LINE L2 -34 3279 3182 2089 137 0 0 chr10 107041487 107041779 -38547509 - AluSq SINE Alu -21 292 1 180 77 0 0 chr10 107042914 107042940 -38546348 + (CA)n Simple_repeat Simple_repeat 2 27 0 1765 125 24 98 chr10 107043499 107043641 -38545647 + AluYb8 SINE Alu 1 152 -166 7754 27 5 2 chr10 107043641 107044902 -38544386 + L1PA3 LINE L1 4929 6155 0 1765 125 24 98 chr10 107044902 107045096 -38544192 + AluYb8 SINE Alu 152 312 -6 1040 249 49 59 chr10 107045150 107045599 -38543689 + L1MEd LINE L1 801 1246 -4959 1705 180 3 14 chr10 107045599 107045893 -38543395 - AluJb SINE Alu -21 291 1 1040 249 49 59 chr10 107045893 107045972 -38543316 + L1MEd LINE L1 1246 1324 -4881 24 0 0 0 chr10 107046375 107046399 -38542889 + AT_rich Low_complexity Low_complexity 1 24 0 7368 184 88 49 chr10 107046644 107048328 -38540960 + MER52A LTR ERV1 1 1750 -5 629 290 94 31 chr10 107048345 107048951 -38540337 + L1MEd LINE L1 2131 2734 -3481 538 267 35 29 chr10 107049032 107049204 -38540084 - MER104 DNA Tc2 -5 175 3 23 0 0 0 chr10 107049967 107049990 -38539298 + AT_rich Low_complexity Low_complexity 1 23 0 2557 51 6 16 chr10 107050387 107050701 -38538587 - AluY SINE Alu 0 311 1 2351 194 26 8 chr10 107050875 107051371 -38537917 - MLT1D LTR MaLR 0 505 1 225 146 0 0 chr10 107051388 107051436 -38537852 + (TCTG)n Simple_repeat Simple_repeat 1 48 0 594 275 120 2 chr10 107052113 107052410 -38536878 + L1MC4a LINE L1 5566 5792 -329 26 0 0 0 chr10 107052420 107052446 -38536842 + AT_rich Low_complexity Low_complexity 1 26 0 195 42 0 0 chr10 107052696 107052720 -38536568 + (TA)n Simple_repeat Simple_repeat 2 25 0 2402 99 0 0 chr10 107052720 107053023 -38536265 - AluSq SINE Alu -10 303 1 220 180 8 33 chr10 107053200 107053322 -38535966 + (TA)n Simple_repeat Simple_repeat 1 119 0 187 331 150 55 chr10 107054677 107054931 -38534357 + L3b LINE CR1 1277 1554 -29 835 186 137 6 chr10 107056800 107056983 -38532305 - MER3 DNA MER1_type 0 209 3 284 324 41 53 chr10 107057103 107057280 -38532008 - MIR SINE MIR -76 186 12 550 316 23 23 chr10 107057437 107057652 -38531636 + MIR SINE MIR 31 245 -17 2448 84 0 0 chr10 107057660 107057958 -38531330 - AluSx SINE Alu -14 298 1 204 328 69 15 chr10 107058052 107058183 -38531105 - MIR SINE MIR -105 157 20 238 207 63 81 chr10 107058589 107058700 -38530588 + MLT1F1 LTR MaLR 424 550 -17 549 230 52 118 chr10 107059115 107059402 -38529886 + L2 LINE L2 3045 3312 -1 183 129 0 0 chr10 107059403 107059434 -38529854 + (GGGA)n Simple_repeat Simple_repeat 2 32 0 226 304 0 0 chr10 107060763 107060832 -38528456 + MER117 DNA MER1_type 4 72 -125 429 200 92 25 chr10 107061168 107061288 -38528000 + MIR3 SINE MIR 71 198 -10 663 225 169 6 chr10 107061801 107061961 -38527327 + MER5A DNA MER1_type 4 189 0 313 98 0 0 chr10 107061961 107062002 -38527286 - MER5B DNA MER1_type -8 170 130 5015 137 29 50 chr10 107062002 107063155 -38526133 + L1MB3 LINE L1 5055 6182 -1 283 246 26 15 chr10 107063155 107063308 -38525980 - MER5B DNA MER1_type -54 124 10 635 251 141 0 chr10 107063325 107063488 -38525800 - MER5A DNA MER1_type 0 189 4 353 243 0 0 chr10 107063879 107063949 -38525339 + L2 LINE L2 3197 3266 -6 354 273 187 7 chr10 107064043 107064182 -38525106 - MER5A DNA MER1_type -1 188 25 517 253 22 55 chr10 107064182 107064364 -38524924 - MER5B DNA MER1_type -2 176 1 197 298 60 60 chr10 107064820 107064904 -38524384 - L2 LINE L2 -50 3222 3139 1693 174 3 14 chr10 107065152 107065445 -38523843 - AluJo SINE Alu -13 299 10 2221 88 13 31 chr10 107065532 107065849 -38523439 + AluSx SINE Alu 1 311 -1 273 315 47 22 chr10 107065857 107066019 -38523269 + MIR SINE MIR 19 181 -72 189 263 0 0 chr10 107066577 107066615 -38522673 - L2 LINE L2 -42 3271 3234 1165 131 56 37 chr10 107066960 107067174 -38522114 + MER20 DNA MER1_type 1 218 -1 1040 243 49 0 chr10 107067913 107068156 -38521132 - MIR SINE MIR 0 262 8 290 363 15 15 chr10 107068463 107068598 -38520690 - L2 LINE L2 -578 2736 2602 312 27 0 0 chr10 107068618 107068655 -38520633 + (TTCA)n Simple_repeat Simple_repeat 1 37 0 359 269 37 46 chr10 107068656 107068764 -38520524 - L2 LINE L2 -18 3295 3189 393 216 90 18 chr10 107069144 107069255 -38520033 + MIR SINE MIR 119 237 -25 223 271 243 19 chr10 107069537 107069644 -38519644 - L2 LINE L2 -3 3269 3139 2410 103 3 0 chr10 107069687 107069999 -38519289 + AluSp SINE Alu 1 313 0 190 259 0 56 chr10 107070504 107070558 -38518730 + MIR3 SINE MIR 146 196 -12 240 378 54 0 chr10 107071012 107071123 -38518165 - L2 LINE L2 0 3313 3197 252 0 0 0 chr10 107072360 107072388 -38516900 + (T)n Simple_repeat Simple_repeat 1 28 0 243 0 0 0 chr10 107072409 107072436 -38516852 + (CA)n Simple_repeat Simple_repeat 1 27 0 243 337 56 11 chr10 107072443 107072532 -38516756 - MIR SINE MIR -86 122 30 618 303 51 5 chr10 107072617 107072812 -38516476 + MIR3 SINE MIR 1 204 -4 1085 179 10 10 chr10 107072830 107073031 -38516257 - MER20 DNA MER1_type -2 217 17 352 292 71 18 chr10 107073794 107073907 -38515381 - MIR3 SINE MIR -45 163 45 2510 34 41 0 chr10 107074512 107074804 -38514484 + AluY SINE Alu 1 304 -7 462 211 66 155 chr10 107075470 107075683 -38513605 + MIR3 SINE MIR 12 205 -3 480 77 0 0 chr10 107077097 107077162 -38512126 + (CGG)n Simple_repeat Simple_repeat 3 67 0 201 129 0 0 chr10 107078143 107078174 -38511114 + (CCG)n Simple_repeat Simple_repeat 2 32 0 28 29 0 0 chr10 107078317 107078352 -38510936 + GC_rich Low_complexity Low_complexity 1 35 0 225 195 23 46 chr10 107078428 107078515 -38510773 + (CGG)n Simple_repeat Simple_repeat 3 87 0 354 94 75 0 chr10 107079352 107079405 -38509883 + L2 LINE L2 3212 3268 -4 432 67 0 0 chr10 107079832 107079892 -38509396 + (CA)n Simple_repeat Simple_repeat 2 61 0 1588 171 61 71 chr10 107081007 107081400 -38507888 + MLT1B LTR MaLR 2 390 0 256 351 65 30 chr10 107081634 107081802 -38507486 + L2 LINE L2 3132 3305 -8 1005 219 141 24 chr10 107082208 107082505 -38506783 - MER46C DNA MER2_type 0 338 7 244 266 14 70 chr10 107083951 107084094 -38505194 + GA-rich Low_complexity Low_complexity 4 138 0 299 328 8 25 chr10 107084220 107084339 -38504949 + GA-rich Low_complexity Low_complexity 6 122 0 456 236 57 24 chr10 107084651 107084774 -38504514 + MIR SINE MIR 135 261 -1 373 224 182 42 chr10 107085001 107085099 -38504189 - MIR SINE MIR -77 185 102 2016 124 3 3 chr10 107085099 107085405 -38503883 + AluSx SINE Alu 1 306 0 373 224 182 42 chr10 107085405 107085461 -38503827 - MIR SINE MIR -160 102 16 284 325 33 33 chr10 107085831 107085982 -38503306 + L3b LINE CR1 1312 1462 -121 258 86 0 0 chr10 107086434 107086469 -38502819 + U2 snRNA snRNA 1 35 -153 2333 118 0 3 chr10 107086690 107087003 -38502285 + AluSx SINE Alu 1 312 0 296 154 58 0 chr10 107087259 107087311 -38501977 - L2 LINE L2 0 3272 3218 358 305 130 19 chr10 107087832 107087986 -38501302 - L2 LINE L2 -11 3261 3091 184 221 191 44 chr10 107088050 107088118 -38501170 + MIR3 SINE MIR 4 81 -127 1459 148 63 4 chr10 107088118 107088200 -38501088 + AluJo SINE Alu 37 113 -199 351 0 0 0 chr10 107088200 107088239 -38501049 + (CA)n Simple_repeat Simple_repeat 2 40 0 1459 148 63 4 chr10 107088239 107088393 -38500895 + AluJo SINE Alu 113 287 -25 180 125 0 0 chr10 107088404 107088436 -38500852 + (GA)n Simple_repeat Simple_repeat 1 32 0 409 257 206 11 chr10 107088760 107088935 -38500353 - MIR SINE MIR -45 217 9 214 360 61 18 chr10 107088981 107089095 -38500193 - MIR SINE MIR -74 134 16 719 252 20 61 chr10 107089353 107089529 -38499759 - MIR SINE MIR -14 248 83 2211 138 3 0 chr10 107089529 107089840 -38499448 - AluSx SINE Alu 0 312 1 719 252 20 61 chr10 107089840 107089909 -38499379 - MIR SINE MIR -179 83 13 731 245 115 92 chr10 107089916 107090393 -38498895 + L2 LINE L2 2824 3311 -2 221 354 62 0 chr10 107091215 107091311 -38497977 + MIR3 SINE MIR 93 194 -14 336 312 156 0 chr10 107091360 107091514 -38497774 - MIR SINE MIR -8 254 77 419 242 8 0 chr10 107091875 107091995 -38497293 + (CAA)n Simple_repeat Simple_repeat 2 122 0 981 176 4 0 chr10 107092005 107092258 -38497030 + (CAG)n Simple_repeat Simple_repeat 1 254 0 432 0 0 0 chr10 107092975 107093023 -38496265 + (GA)n Simple_repeat Simple_repeat 1 48 0 210 381 101 7 chr10 107093673 107093812 -38495476 - L2 LINE L2 -25 3288 3137 324 349 114 0 chr10 107093958 107094124 -38495164 - MIR3 SINE MIR 0 208 24 2181 191 113 22 chr10 107094902 107095399 -38493889 + MLT1F LTR MaLR 1 542 0 350 348 143 0 chr10 107095484 107095645 -38493643 - MIR3 SINE MIR -10 198 15 1787 150 0 28 chr10 107095685 107095972 -38493316 - AluJb SINE Alu -18 294 16 332 213 0 0 chr10 107095992 107096053 -38493235 - L2 LINE L2 -5 3308 3248 339 265 169 15 chr10 107096469 107096605 -38492683 - MIR3 SINE MIR -32 176 20 773 281 67 4 chr10 107097039 107097277 -38492011 + MIR SINE MIR 7 259 -3 519 250 6 58 chr10 107097407 107097579 -38491709 - L1ME1 LINE L1 -21 6145 5983 22 0 0 0 chr10 107097685 107097707 -38491581 + AT_rich Low_complexity Low_complexity 1 22 0 343 261 15 8 chr10 107097772 107097906 -38491382 + L1MC4 LINE L1 7908 8042 0 320 292 0 21 chr10 107097974 107098070 -38491218 + MER5B DNA MER1_type 27 120 -58 483 270 0 0 chr10 107098411 107098511 -38490777 - MER81 DNA DNA -14 100 1 1426 187 61 64 chr10 107098558 107098933 -38490355 - MLT1A2 LTR MaLR 0 374 1 202 174 133 71 chr10 107100015 107100113 -38489175 + MIR3 SINE MIR 9 112 -96 * 595 244 68 43 chr10 107100112 107100344 -38488944 + MIR SINE MIR 5 252 -10 695 298 11 11 chr10 107100412 107100603 -38488685 - MIR SINE MIR -13 249 59 1358 189 22 22 chr10 107100631 107100948 -38488340 + MER33 DNA MER1_type 1 317 -7 414 250 83 0 chr10 107101444 107101540 -38487748 - L3 LINE CR1 -113 1464 1361 212 322 0 17 chr10 107101640 107101699 -38487589 + MER5A DNA MER1_type 82 139 -50 210 128 0 0 chr10 107101699 107101738 -38487550 + (TC)n Simple_repeat Simple_repeat 2 40 0 216 0 0 0 chr10 107101738 107101762 -38487526 + (CA)n Simple_repeat Simple_repeat 1 24 0 517 294 61 0 chr10 107102076 107102239 -38487049 - MIR SINE MIR -16 246 74 2782 284 23 33 chr10 107103019 107103922 -38485366 - L3 LINE CR1 -283 1294 401 210 338 38 0 chr10 107104350 107104430 -38484858 + L2 LINE L2 3187 3269 -3 687 276 43 5 chr10 107105217 107105402 -38483886 + MIR SINE MIR 23 214 -48 361 209 11 44 chr10 107105424 107105515 -38483773 + MIR SINE MIR 69 156 -106 649 283 80 40 chr10 107106780 107107031 -38482257 - MIR SINE MIR 0 262 2 254 213 38 50 chr10 107107161 107107241 -38482047 + MIR SINE MIR 114 192 -70 2229 109 7 0 chr10 107107458 107107751 -38481537 + AluSg SINE Alu 1 295 -15 506 220 51 3 chr10 107108548 107108665 -38480623 - MIR SINE MIR -63 145 44 451 277 43 21 chr10 107108634 107108815 -38480473 + MIR SINE MIR 8 192 -62 * 708 173 0 8 chr10 107109232 107109359 -38479929 - L2 LINE L2 0 3313 3188 190 260 20 0 chr10 107109742 107109792 -38479496 + L2 LINE L2 3259 3309 -4 464 92 79 0 chr10 107110074 107110150 -38479138 + L1M2 LINE L1 5476 5557 -743 1031 82 16 33 chr10 107111110 107111181 -38478107 + (TTTC)n Simple_repeat Simple_repeat 1 249 0 1031 82 16 33 chr10 107111181 107111364 -38477924 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1250 290 36 27 chr10 107111495 107111943 -38477345 - LTR16B LTR ERVL -12 452 1 417 266 3 13 chr10 107112119 107112244 -38477044 + AluSq/x SINE Alu 9 107 -195 1031 102 15 31 chr10 107112742 107113078 -38476210 + (TTTC)n Simple_repeat Simple_repeat 1 511 0 1271 286 38 27 chr10 107113101 107113548 -38475740 - LTR16B LTR ERVL -12 452 1 2127 138 0 7 chr10 107113724 107114022 -38475266 + AluSx SINE Alu 9 304 -8 539 185 90 56 chr10 107114080 107114258 -38475030 + L2 LINE L2 3129 3312 -1 560 310 29 6 chr10 107114388 107114562 -38474726 + MIR SINE MIR 5 182 -80 345 269 167 9 chr10 107114979 107115087 -38474201 - MIR SINE MIR -111 151 27 1045 304 33 26 chr10 107116140 107116164 -38473124 + MLT1K LTR MaLR 11 33 -555 2216 104 7 3 chr10 107116164 107116461 -38472827 - AluSq SINE Alu -14 299 2 1045 304 33 26 chr10 107116461 107116911 -38472377 + MLT1K LTR MaLR 33 519 -69 325 350 30 0 chr10 107116985 107117085 -38472203 + L2 LINE L2 3122 3224 -48 1898 153 131 6 chr10 107117526 107117878 -38471410 - MSTD LTR MaLR 0 396 1 237 246 149 61 chr10 107118623 107118737 -38470551 + MIR3 SINE MIR 2 125 -83 522 0 0 0 chr10 107118788 107118846 -38470442 + (TG)n Simple_repeat Simple_repeat 2 59 0 535 301 18 12 chr10 107119716 107119879 -38469409 - MIR SINE MIR -79 183 20 215 219 0 0 chr10 107120301 107120342 -38468946 + (CACCAT)n Simple_repeat Simple_repeat 4 44 0 634 270 136 58 chr10 107120662 107121044 -38468244 - L1M4 LINE L1 -1145 5001 4590 2186 126 0 3 chr10 107121374 107121675 -38467613 + AluSx SINE Alu 1 300 -12 399 271 93 21 chr10 107122042 107122182 -38467106 - L2 LINE L2 -5 3308 3159 1738 145 3 0 chr10 107122959 107123248 -38466040 + L1MA5A LINE L1 6008 6297 0 193 299 26 26 chr10 107123794 107123871 -38465417 - L2 LINE L2 0 3313 3237 180 176 0 0 chr10 107124030 107124064 -38465224 - L2 LINE L2 -19 3294 3261 545 290 58 75 chr10 107124404 107124780 -38464508 - MLT1K LTR MaLR 0 588 219 463 235 1 30 chr10 107125226 107125371 -38463917 - MIR SINE MIR -58 150 43 519 233 44 13 chr10 107125871 107126030 -38463258 - MIR3 SINE MIR -27 181 18 534 249 90 56 chr10 107126346 107126672 -38462616 - MLT1H LTR MaLR -3 621 208 1900 172 58 29 chr10 107127211 107127589 -38461699 + MLT1B LTR MaLR 1 389 -1 245 254 84 0 chr10 107128358 107128429 -38460859 - L2 LINE L2 -34 3238 3162 224 291 58 29 chr10 107128439 107128542 -38460746 + MIR3 SINE MIR 90 195 -13 180 333 61 45 chr10 107129213 107129345 -38459943 - L2 LINE L2 -3 3269 3136 236 254 17 0 chr10 107130281 107130340 -38458948 + CT-rich Low_complexity Low_complexity 6 65 0 612 281 67 13 chr10 107130773 107130997 -38458291 - MIR SINE MIR -4 258 23 351 257 40 9 chr10 107131814 107131940 -38457348 - MIR SINE MIR -61 147 19 1948 192 23 0 chr10 107133049 107133403 -38455885 - MLT1A1 LTR MaLR 0 365 4 312 281 71 83 chr10 107133414 107133667 -38455621 + L2 LINE L2 3003 3252 -20 2582 61 3 0 chr10 107133898 107134208 -38455080 - AluY SINE Alu 0 311 1 310 163 31 61 chr10 107134370 107134468 -38454820 - MIR SINE MIR -84 178 84 256 163 0 0 chr10 107134471 107134520 -38454768 - L1PB1 LINE L1 0 6151 6103 294 102 0 0 chr10 107134546 107134595 -38454693 + MLT1A1 LTR MaLR 60 108 -257 4367 125 12 0 chr10 107134602 107134783 -38454505 - L1PB1 LINE L1 -43 6108 5928 1562 279 26 6 chr10 107134783 107135291 -38453997 - L1MB2 LINE L1 -244 5927 5410 418 313 43 17 chr10 107135528 107135758 -38453530 - MIR SINE MIR 0 262 27 263 287 191 0 chr10 107136868 107137098 -38452190 + L2 LINE L2 2439 2712 -602 443 175 0 0 chr10 107137286 107137366 -38451922 + L2 LINE L2 3193 3272 0 214 214 0 0 chr10 107137608 107137650 -38451638 + L2 LINE L2 2992 3033 -239 2203 114 3 0 chr10 107138703 107138992 -38450296 - AluSx SINE Alu -22 290 1 855 223 34 71 chr10 107139028 107139235 -38450053 - L1ME3 LINE L1 -6 6156 5965 2286 125 0 0 chr10 107139235 107139546 -38449742 - AluSq SINE Alu -2 311 1 855 223 34 71 chr10 107139546 107139648 -38449640 - L1ME3 LINE L1 -197 5965 5861 185 333 0 0 chr10 107139678 107139726 -38449562 + L2 LINE L2 3210 3257 -15 510 175 271 6 chr10 107139759 107139925 -38449363 + MIR SINE MIR 47 256 -6 906 137 208 48 chr10 107140422 107140698 -38448590 + MER33 DNA MER1_type 1 324 0 1397 250 151 28 chr10 107140702 107142282 -38447006 - L1MC4a LINE L1 -743 5403 4401 679 255 108 36 chr10 107142275 107142718 -38446570 - L1ME3 LINE L1 -266 5855 5381 * 387 56 0 0 chr10 107142827 107142881 -38446407 + (TG)n Simple_repeat Simple_repeat 2 55 0 1916 166 0 0 chr10 107142881 107143165 -38446123 - AluJb SINE Alu -28 284 1 21 57 0 0 chr10 107143422 107143457 -38445831 + AT_rich Low_complexity Low_complexity 1 35 0 1887 147 0 16 chr10 107145147 107145453 -38443835 + AluSx SINE Alu 3 303 -9 816 157 29 0 chr10 107145908 107146048 -38443240 + MLT1A1 LTR MaLR 7 150 -215 997 205 44 18 chr10 107146170 107146443 -38442845 - HAL1 LINE L1 -900 1607 1328 796 271 131 20 chr10 107146615 107146965 -38442323 - HAL1 LINE L1 -2110 397 9 425 291 63 31 chr10 107147200 107147423 -38441865 - L1ME4a LINE L1 -14 6107 5878 192 175 0 88 chr10 107147488 107147545 -38441743 - MIR SINE MIR 0 262 211 3074 201 204 33 chr10 107147570 107147967 -38441321 - L1MC4 LINE L1 -2 8040 7712 2025 128 10 10 chr10 107147967 107148264 -38441024 - AluJo SINE Alu -15 297 1 3074 201 204 33 chr10 107148264 107148485 -38440803 - L1MC4 LINE L1 -330 7712 7530 303 110 82 14 chr10 107148485 107148558 -38440730 - L1MB3 LINE L1 -2 6181 6104 3074 201 204 33 chr10 107148558 107149090 -38440198 - L1MC4 LINE L1 -512 7530 6692 760 245 57 33 chr10 107149979 107150191 -38439097 - MIR SINE MIR -15 247 31 723 156 8 0 chr10 107150950 107151078 -38438210 + FLAM_A SINE Alu 1 129 -4 765 151 7 75 chr10 107151116 107151211 -38438077 + MER2 DNA MER2_type 1 84 -261 1454 205 14 20 chr10 107151211 107151508 -38437780 + AluJo SINE Alu 2 296 -16 765 151 7 75 chr10 107151508 107151558 -38437730 + MER2 DNA MER2_type 84 136 -209 1983 151 3 3 chr10 107151588 107151900 -38437388 - AluSx SINE Alu 0 312 1 2628 92 21 16 chr10 107151911 107152292 -38436996 - L1PB1 LINE L1 -2 6149 5767 2008 57 0 0 chr10 107152296 107152540 -38436748 - L1PA3 LINE L1 -3 6152 5909 3273 147 69 1 chr10 107152541 107153367 -38435921 - L1PA3 LINE L1 -366 5785 4910 944 258 15 11 chr10 107154576 107154836 -38434452 + MIR SINE MIR 2 262 0 207 314 14 79 chr10 107155308 107155448 -38433840 + MIR3 SINE MIR 3 133 -75 643 289 83 6 chr10 107155497 107155677 -38433611 + MER91A DNA MER1_type 3 196 0 267 291 25 0 chr10 107155732 107155811 -38433477 - L2 LINE L2 -5 3308 3228 635 260 183 37 chr10 107155821 107156358 -38432930 + L2 LINE L2 2462 3072 -241 2049 143 156 5 chr10 107156380 107156752 -38432536 - MSTA LTR MaLR 0 428 1 363 300 0 33 chr10 107156814 107156964 -38432324 + L2 LINE L2 3164 3308 -5 307 193 89 156 chr10 107157036 107157171 -38432117 + MER63 DNA MER1_type 1 752 -84 308 190 0 17 chr10 107157176 107157234 -38432054 + MER63 DNA MER1_type 985 1041 -20 747 172 0 28 chr10 107157234 107157379 -38431909 + FLAM_C SINE Alu 2 142 -1 209 237 34 136 chr10 107157433 107157551 -38431737 - L2 LINE L2 -169 3103 2998 432 229 107 8 chr10 107158074 107158196 -38431092 + L2 LINE L2 3180 3313 0 1475 180 52 31 chr10 107158207 107158496 -38430792 - AluJo SINE Alu -9 303 9 1174 131 175 52 chr10 107158605 107158873 -38430415 - LTR8A LTR ERV1 -2 725 425 3373 50 71 44 chr10 107158930 107159407 -38429881 + LTR2B LTR ERV1 1 490 0 2098 106 0 48 chr10 107159522 107159833 -38429455 - AluSx SINE Alu -16 296 1 257 310 262 6 chr10 107159972 107160304 -38428984 - L2 LINE L2 -1177 2137 1721 237 277 62 54 chr10 107161145 107161275 -38428013 + MIR SINE MIR 20 150 -112 814 146 15 23 chr10 107161882 107162012 -38427276 - FLAM_C SINE Alu 0 133 5 1184 104 62 5 chr10 107162215 107162407 -38426881 - Tigger4(Zombi) DNA MER2_type 0 2731 2529 1873 148 0 4 chr10 107162419 107162697 -38426591 + AluSx SINE Alu 3 279 -33 191 212 0 0 chr10 107163051 107163084 -38426204 - MIR SINE MIR -114 148 116 495 266 19 19 chr10 107163882 107164036 -38425252 - MIR SINE MIR 0 262 109 408 285 139 18 chr10 107164089 107164254 -38425034 - MIR3 SINE MIR -10 198 14 2272 103 3 7 chr10 107165109 107165410 -38423878 - AluSx SINE Alu -10 302 3 200 363 11 0 chr10 107165720 107165811 -38423477 + MIR SINE MIR 16 107 -155 323 286 13 0 chr10 107166168 107166245 -38423043 + MER5A DNA MER1_type 110 187 -2 189 239 111 51 chr10 107166262 107166379 -38422909 - L3 LINE CR1 -84 1493 1370 632 278 80 9 chr10 107167570 107167782 -38421506 - MIR SINE MIR 0 262 36 206 67 0 0 chr10 107167778 107167808 -38421480 + L2 LINE L2 3243 3272 0 * 2409 89 0 25 chr10 107168521 107168837 -38420451 - AluSg SINE Alu -2 308 1 438 190 13 0 chr10 107169185 107169264 -38420024 + L2 LINE L2 3223 3302 -11 816 293 27 21 chr10 107169898 107170270 -38419018 - L1ME4a LINE L1 -200 5921 5548 215 335 128 47 chr10 107170458 107170990 -38418298 + L2 LINE L2 1485 2059 -1255 641 292 60 88 chr10 107171053 107171550 -38417738 + MLT1K LTR MaLR 89 571 -17 664 206 23 30 chr10 107172717 107172848 -38416440 + FLAM_C SINE Alu 1 130 -3 252 286 168 25 chr10 107173034 107173195 -38416093 + MIR SINE MIR 5 188 -74 23 0 0 0 chr10 107173266 107173289 -38415999 + AT_rich Low_complexity Low_complexity 1 23 0 306 239 51 40 chr10 107174734 107174910 -38414378 + (CAGAGA)n Simple_repeat Simple_repeat 3 180 0 22 35 0 0 chr10 107175163 107175192 -38414096 + AT_rich Low_complexity Low_complexity 1 29 0 309 253 41 59 chr10 107175192 107175362 -38413926 - L1ME4a LINE L1 -1 6120 5954 1003 204 246 43 chr10 107175774 107176254 -38413034 - MLT1G3 LTR MaLR -2 528 38 227 100 0 25 chr10 107176641 107176681 -38412607 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 1954 139 0 0 chr10 107176684 107176957 -38412331 + AluSx SINE Alu 22 294 -18 1992 167 0 0 chr10 107176960 107177301 -38411987 + AluSx SINE Alu 1 312 0 418 250 147 7 chr10 107177301 107177437 -38411851 + MER46C DNA MER2_type 181 335 -3 247 243 266 40 chr10 107178142 107178319 -38410969 - L1ME4a LINE L1 -23 6098 5882 663 151 79 24 chr10 107178335 107178461 -38410827 + AluJo SINE Alu 2 134 -178 243 125 0 0 chr10 107178497 107178537 -38410751 + (TTTA)n Simple_repeat Simple_repeat 3 42 0 2209 104 0 0 chr10 107178540 107178820 -38410468 - AluSg SINE Alu -30 280 1 223 295 57 38 chr10 107178857 107178962 -38410326 + MIR SINE MIR 35 141 -121 182 280 89 53 chr10 107179583 107179808 -38409480 - L2 LINE L2 -774 2540 2308 580 250 57 48 chr10 107179907 107179978 -38409310 + MARNA DNA Mariner 149 218 -368 2251 92 3 0 chr10 107179978 107180272 -38409016 + AluSg SINE Alu 2 296 -14 580 250 57 48 chr10 107180272 107180428 -38408860 + MARNA DNA Mariner 218 378 -208 269 158 0 53 chr10 107180484 107180541 -38408747 - L1MB8 LINE L1 0 6178 6125 398 214 54 9 chr10 107180549 107180661 -38408627 - L1MA4 LINE L1 -39 6261 6145 402 299 0 34 chr10 107180791 107180938 -38408350 + L2 LINE L2 3167 3308 -5 1462 207 64 90 chr10 107181035 107181490 -38407798 + LTR8 LTR ERV1 285 691 0 258 32 0 0 chr10 107181648 107181679 -38407609 + (TTTTG)n Simple_repeat Simple_repeat 5 35 0 2817 145 29 4 chr10 107181698 107182152 -38407136 - L1MB2 LINE L1 -3 6168 5704 334 243 83 30 chr10 107183228 107183397 -38405891 - MER117 DNA MER1_type -19 178 1 924 280 19 73 chr10 107183566 107183785 -38405503 - L3 LINE CR1 -187 1390 1198 1971 160 0 0 chr10 107183785 107184097 -38405191 - AluJb SINE Alu 0 312 1 924 280 19 73 chr10 107184097 107184249 -38405039 - L3 LINE CR1 -379 1198 1039 215 324 137 44 chr10 107184443 107184647 -38404641 - L3 LINE CR1 -4 1573 1351 1659 203 20 0 chr10 107184665 107184971 -38404317 + AluJo SINE Alu 1 312 0 512 89 13 0 chr10 107184971 107185050 -38404238 + (GGAAA)n Simple_repeat Simple_repeat 5 84 0 189 167 56 0 chr10 107185078 107185114 -38404174 - MIR SINE MIR -15 247 210 182 336 50 50 chr10 107185188 107185307 -38403981 - L2 LINE L2 -77 3195 3077 1109 241 137 52 chr10 107185340 107185460 -38403828 + L2 LINE L2 2665 2773 -540 898 159 0 0 chr10 107185460 107185592 -38403696 + FLAM_C SINE Alu 1 132 -1 1109 241 137 52 chr10 107185592 107186078 -38403210 + L2 LINE L2 2773 3313 0 234 333 64 54 chr10 107186084 107186119 -38403169 - L3 LINE CR1 -1297 280 247 1922 162 7 0 chr10 107186119 107186421 -38402867 + AluJo SINE Alu 1 304 -8 234 333 64 54 chr10 107186421 107186589 -38402699 - L3 LINE CR1 -1330 247 75 927 284 4 17 chr10 107186933 107187169 -38402119 + MIR SINE MIR 3 235 -27 438 184 69 23 chr10 107188240 107188461 -38400827 + AluJb SINE Alu 205 429 0 7689 145 46 9 chr10 107188599 107191148 -38398140 - L1PBa LINE L1 -2502 4360 1715 213 238 0 0 chr10 107191961 107192003 -38397285 + (CATATA)n Simple_repeat Simple_repeat 3 44 0 623 207 16 16 chr10 107192265 107192386 -38396902 + MLT1J LTR MaLR 76 196 -315 2444 147 12 56 chr10 107192387 107192815 -38396473 + Tigger4(Zombi) DNA MER2_type 25 433 -2298 361 161 74 12 chr10 107192821 107192902 -38396386 + Tigger4(Zombi) DNA MER2_type 2646 2731 0 434 231 94 26 chr10 107192905 107193022 -38396266 + MLT1J LTR MaLR 187 311 -200 1169 115 12 0 chr10 107193133 107193298 -38395990 - MER49 LTR ERV1 -606 317 151 6967 58 16 26 chr10 107193304 107195025 -38394263 - SVA Other Other -647 1386 1 725 201 182 10 chr10 107195460 107195669 -38393619 - MIR SINE MIR -3 259 15 6845 143 20 37 chr10 107195708 107196934 -38392354 + L1M3f LINE L1 5 1209 -4119 1126 244 15 11 chr10 107196930 107197201 -38392087 + L1M3f LINE L1 2643 2914 -3414 * 534 277 109 5 chr10 107197859 107198043 -38391245 + MIR SINE MIR 12 214 -48 619 268 170 5 chr10 107199467 107199691 -38389597 + MIR SINE MIR 2 262 0 1555 187 0 32 chr10 107200504 107200814 -38388474 - AluJo SINE Alu -12 300 1 312 343 77 28 chr10 107201333 107201514 -38387774 + MIR3 SINE MIR 16 205 -3 948 236 31 27 chr10 107205495 107205754 -38383534 - L1ME1 LINE L1 0 6961 6702 * 4295 217 99 24 chr10 107205749 107207193 -38382095 - L1ME1 LINE L1 -745 6216 4645 27 0 0 0 chr10 107207203 107207230 -38382058 + AT_rich Low_complexity Low_complexity 1 27 0 23293 77 12 16 chr10 107207230 107213361 -38375927 - L1PA6 LINE L1 -10 6144 11 1544 237 155 37 chr10 107213383 107213622 -38375666 - L1ME1 LINE L1 -4754 2187 1977 207 0 0 0 chr10 107213622 107213645 -38375643 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1544 237 155 37 chr10 107213645 107214473 -38374815 - L1ME1 LINE L1 -4964 1977 958 2051 136 39 9 chr10 107214473 107214811 -38374477 + MER7A DNA MER2_type 1 346 0 1544 237 155 37 chr10 107214811 107214982 -38374306 - L1ME1 LINE L1 -5983 958 808 307 304 93 30 chr10 107215013 107215283 -38374005 - L1ME1 LINE L1 -6107 316 30 596 330 56 76 chr10 107215404 107216244 -38373044 - L2 LINE L2 -1 3271 2453 386 306 119 12 chr10 107217106 107217266 -38372022 + MIR SINE MIR 48 224 -38 1337 142 23 0 chr10 107217341 107217431 -38371857 - MER46A DNA MER2_type 0 236 142 475 185 62 68 chr10 107217431 107217577 -38371711 + MER46A DNA MER2_type 4 148 -88 1590 190 9 38 chr10 107217917 107218233 -38371055 - AluJo SINE Alu -5 307 1 300 282 87 10 chr10 107218356 107218459 -38370829 - L2 LINE L2 -2 3270 3160 571 283 6 39 chr10 107218965 107219145 -38370143 + MIR SINE MIR 18 191 -71 1691 149 78 9 chr10 107220129 107220451 -38368837 + MER2 DNA MER2_type 1 344 0 33 25 0 0 chr10 107220511 107220551 -38368737 + AT_rich Low_complexity Low_complexity 1 40 0 279 220 40 92 chr10 107220779 107220847 -38368441 - MER112 DNA MER1_type -89 171 101 7025 60 7 0 chr10 107220847 107222030 -38367258 - L1PA6 LINE L1 -4 6150 4965 2150 111 0 0 chr10 107222034 107222314 -38366974 - AluSx SINE Alu -32 280 1 279 220 40 92 chr10 107222314 107222413 -38366875 - MER112 DNA MER1_type -162 98 8 5825 203 49 86 chr10 107222474 107223855 -38365433 + L1MB2 LINE L1 3123 4554 -1617 849 149 6 68 chr10 107223855 107224016 -38365272 - MER46A DNA MER2_type -85 151 1 440 220 35 92 chr10 107223863 107224036 -38365252 + MER46A DNA MER2_type 3 165 -71 * 5825 203 49 86 chr10 107224016 107225645 -38363643 + L1MB2 LINE L1 4554 6155 -16 183 267 0 0 chr10 107226423 107226468 -38362820 + L2 LINE L2 1614 1658 -1656 396 287 67 7 chr10 107226468 107226618 -38362670 + L2 LINE L2 1812 1970 -1344 22 35 0 0 chr10 107226621 107226650 -38362638 + AT_rich Low_complexity Low_complexity 1 29 0 689 186 8 8 chr10 107226660 107226784 -38362504 - AluJb SINE Alu -88 224 101 863 274 167 6 chr10 107226784 107227102 -38362186 + L2 LINE L2 2472 2840 -474 752 139 0 0 chr10 107227110 107227218 -38362070 - AluSg/x SINE Alu -16 294 187 1070 122 0 6 chr10 107227218 107227374 -38361914 - AluSg SINE Alu -92 218 64 978 308 127 5 chr10 107227397 107227816 -38361472 + L2 LINE L2 2844 3313 0 229 309 119 42 chr10 107228086 107228254 -38361034 - L2 LINE L2 -461 2853 2673 1250 187 96 1 chr10 107229083 107229371 -38359917 - MER33 DNA MER1_type -22 302 1 298 259 122 29 chr10 107230631 107230770 -38358518 - MIR SINE MIR 0 262 111 1011 152 6 23 chr10 107232073 107232244 -38357044 - FAM SINE Alu -5 44 1 1966 223 47 102 chr10 107232380 107232763 -38356525 + L1MC4 LINE L1 7160 7562 -480 2219 100 0 13 chr10 107232763 107233064 -38356224 + AluSg SINE Alu 1 297 -13 1966 223 47 102 chr10 107233064 107233613 -38355675 + L1MC4 LINE L1 7562 8041 -1 2104 94 21 0 chr10 107234318 107234605 -38354683 + AluSp SINE Alu 1 293 -20 1369 152 79 55 chr10 107234794 107235124 -38354164 + MER44D DNA MER2_type 2 609 0 2192 200 81 11 chr10 107235197 107235742 -38353546 - MER63 DNA MER1_type -3 1058 476 22 0 0 0 chr10 107235859 107235881 -38353407 + AT_rich Low_complexity Low_complexity 1 22 0 574 319 68 39 chr10 107236064 107236374 -38352914 - L3 LINE CR1 -102 1475 1157 865 318 73 55 chr10 107236374 107236952 -38352336 - L3 LINE CR1 -584 993 406 1536 169 6 69 chr10 107237914 107238233 -38351055 + AluJb SINE Alu 1 299 -13 22 56 0 0 chr10 107240433 107240469 -38348819 + AT_rich Low_complexity Low_complexity 1 36 0 185 284 30 60 chr10 107240643 107240710 -38348578 - MIR3 SINE MIR -6 202 138 222 301 196 42 chr10 107240832 107240975 -38348313 - MIR SINE MIR -27 181 17 567 192 294 0 chr10 107241387 107241533 -38347755 + MER5A DNA MER1_type 1 189 0 450 120 65 11 chr10 107243860 107243952 -38345336 - L1MC2 LINE L1 0 6344 6248 406 262 121 43 chr10 107245075 107245095 -38344193 - MIR3 SINE MIR -37 171 154 214 48 0 71 chr10 107245095 107245137 -38344151 + (CTAGT)n Simple_repeat Simple_repeat 4 42 0 406 262 121 43 chr10 107245137 107245257 -38344031 - MIR3 SINE MIR -54 154 20 1398 220 106 7 chr10 107245454 107245858 -38343430 - HsTC2 DNA Tc2 -3 1895 1452 232 236 0 18 chr10 107245871 107245926 -38343362 - HsTC2 DNA Tc2 -570 1328 1275 338 182 57 23 chr10 107245945 107246033 -38343255 - HsTC2 DNA Tc2 -1803 95 5 1379 139 5 5 chr10 107246424 107246633 -38342655 + AluJo SINE Alu 3 211 -101 1637 180 7 24 chr10 107246821 107247110 -38342178 - AluJo SINE Alu -28 284 1 228 325 36 0 chr10 107247169 107247252 -38342036 - L2 LINE L2 -1 3312 3227 6212 164 17 5 chr10 107247368 107248541 -38340747 - L1MCc LINE L1 -1110 5831 4645 521 126 89 0 chr10 107248544 107248656 -38340632 + L1M4 LINE L1 3726 3846 -2300 471 214 88 6 chr10 107248674 107248856 -38340432 - L1MCc LINE L1 -2895 4046 3850 * 2171 174 66 7 chr10 107248855 107249152 -38340136 - L1MCc LINE L1 -3444 3497 3219 1899 148 35 0 chr10 107249152 107249442 -38339846 - AluSx SINE Alu -12 300 1 2171 174 66 7 chr10 107249442 107249971 -38339317 - L1MCc LINE L1 -3722 3219 2618 2883 146 70 3 chr10 107250005 107250601 -38338687 - L1MCc LINE L1 -4474 2468 1833 13130 30 1 0 chr10 107250617 107252948 -38336340 - L1PA2 LINE L1 -2 6153 3815 5342 37 0 0 chr10 107252948 107253604 -38335684 + L1PA2 LINE L1 3168 3823 -2323 3063 244 70 27 chr10 107253592 107254479 -38334809 - L1MCc LINE L1 -5085 1857 933 * 1201 172 110 4 chr10 107255147 107255420 -38333868 - MER33 DNA MER1_type -22 302 1 1636 147 27 27 chr10 107256078 107256370 -38332918 - AluJb SINE Alu -20 292 1 1646 171 59 52 chr10 107256522 107256948 -38332340 + L1M4 LINE L1 4364 4792 -1354 1427 212 27 35 chr10 107256947 107257315 -38331973 - L1MCc LINE L1 -6044 379 15 * 442 226 68 34 chr10 107257376 107257522 -38331766 - MIR SINE MIR -14 248 98 21 36 0 0 chr10 107257533 107257561 -38331727 + AT_rich Low_complexity Low_complexity 1 28 0 19172 39 5 2 chr10 107257812 107260969 -38328319 - L1PA5 LINE L1 0 6154 2990 406 258 48 81 chr10 107262169 107262288 -38327000 - L1MEc LINE L1 -4115 2281 2169 1598 155 0 4 chr10 107262288 107262520 -38326768 - AluJb SINE Alu -81 231 1 406 258 48 81 chr10 107262520 107262586 -38326702 - L1MEc LINE L1 -4227 2169 2102 297 214 90 11 chr10 107262995 107263084 -38326204 - MER58A DNA MER1_type 0 139 44 445 270 98 23 chr10 107263675 107263849 -38325439 - MIR SINE MIR -13 249 63 985 174 12 95 chr10 107265254 107265495 -38323793 - MER58A DNA MER1_type -3 221 1 390 198 16 99 chr10 107268125 107268246 -38321042 + MIR SINE MIR 29 139 -123 253 327 47 19 chr10 107268489 107268596 -38320692 - L2 LINE L2 -18 3254 3145 325 271 124 16 chr10 107268798 107268927 -38320361 - MIR SINE MIR -119 143 1 635 284 36 18 chr10 107268966 107269188 -38320100 - L3b LINE CR1 -94 1489 1264 501 238 27 47 chr10 107269215 107269416 -38319872 + MIR SINE MIR 34 231 -31 244 292 34 11 chr10 107269478 107269567 -38319721 - MER117 DNA MER1_type -5 192 102 260 242 0 32 chr10 107269690 107269752 -38319536 + L2 LINE L2 3213 3272 0 1838 169 10 0 chr10 107269925 107270221 -38319067 - AluJb SINE Alu -13 299 1 2318 115 0 0 chr10 107270250 107270555 -38318733 + AluSx SINE Alu 1 305 -7 23 33 0 0 chr10 107270687 107270717 -38318571 + AT_rich Low_complexity Low_complexity 1 30 0 339 340 120 59 chr10 107271038 107271730 -38317558 - L3 LINE CR1 -817 760 27 576 271 36 0 chr10 107271973 107272117 -38317171 + MIR SINE MIR 16 163 -57 2052 132 0 14 chr10 107272289 107272585 -38316703 + AluSx SINE Alu 1 292 -20 795 187 154 41 chr10 107272587 107272833 -38316455 - MER46C DNA MER2_type -44 294 21 669 288 157 29 chr10 107279426 107279871 -38309417 + LTR33 LTR ERVL 1 502 -19 279 231 157 66 chr10 107280300 107280421 -38308867 - MIR3 SINE MIR -62 146 15 294 305 11 42 chr10 107280568 107280663 -38308625 + L2 LINE L2 3180 3271 -1 289 178 67 78 chr10 107281476 107281566 -38307722 - MIR SINE MIR -55 207 119 423 319 31 31 chr10 107284222 107284385 -38304903 + MIR SINE MIR 5 167 -95 390 151 0 41 chr10 107285406 107285479 -38303809 + MER112 DNA MER1_type 6 75 -185 422 346 47 5 chr10 107286001 107286215 -38303073 - L3 LINE CR1 -33 1544 1322 435 292 128 41 chr10 107286406 107286806 -38302482 + L2 LINE L2 2508 3027 -245 298 287 35 0 chr10 107286829 107286916 -38302372 + L2 LINE L2 3176 3265 -7 418 301 110 6 chr10 107287201 107287364 -38301924 + MIR3 SINE MIR 4 183 -25 615 224 117 45 chr10 107288863 107289086 -38300202 - MER113 DNA MER1_type? -158 363 125 311 298 10 0 chr10 107291451 107291555 -38297733 - MIR3 SINE MIR -39 169 65 199 316 53 26 chr10 107292695 107292771 -38296517 - L2 LINE L2 0 3313 3236 181 282 77 39 chr10 107293891 107293969 -38295319 - MIR SINE MIR -63 145 65 250 288 252 14 chr10 107294299 107294438 -38294850 - L2 LINE L2 -1 3271 3100 288 313 24 0 chr10 107295273 107295356 -38293932 + L2 LINE L2 3188 3272 0 372 234 53 0 chr10 107295543 107295637 -38293651 - MIR SINE MIR -105 157 59 244 331 71 55 chr10 107296154 107296281 -38293007 + MIR3 SINE MIR 9 137 -71 287 213 53 40 chr10 107296578 107296653 -38292635 - L2 LINE L2 -56 3216 3141 988 266 121 28 chr10 107297070 107297543 -38291745 - MER115 DNA AcHobo 0 693 177 271 229 43 0 chr10 107297613 107297683 -38291605 - MER115 DNA AcHobo -617 76 4 215 59 0 29 chr10 107298448 107298482 -38290806 + (TCC)n Simple_repeat Simple_repeat 2 34 0 2145 144 0 3 chr10 107299295 107299608 -38289680 - AluSx SINE Alu 0 312 1 843 223 16 16 chr10 107300110 107300298 -38288990 + MER5A DNA MER1_type 1 188 -1 1275 50 6 16 chr10 107301036 107301218 -38288070 + (GAA)n Simple_repeat Simple_repeat 1 180 0 208 256 151 35 chr10 107301798 107301884 -38287404 - L2 LINE L2 -2 3311 3216 2532 249 37 49 chr10 107302339 107302508 -38286780 - L1MDa LINE L1 -1325 5215 5045 2049 151 0 0 chr10 107302508 107302815 -38286473 - AluSx SINE Alu 0 307 1 2532 249 37 49 chr10 107302815 107304088 -38285200 - L1MDa LINE L1 -1495 5045 3758 2171 85 7 11 chr10 107304088 107304409 -38284879 - AluSc SINE Alu 0 320 1 2532 249 37 49 chr10 107304409 107304488 -38284800 - L1MDa LINE L1 -2782 3758 3680 4027 116 18 3 chr10 107304488 107304741 -38284547 + L1PB1 LINE L1 5535 5783 -368 477 0 0 0 chr10 107304741 107304794 -38284494 + (TA)n Simple_repeat Simple_repeat 2 54 0 4027 116 18 3 chr10 107304794 107305144 -38284144 + L1PB1 LINE L1 5783 6147 -4 2532 249 37 49 chr10 107305144 107305615 -38283673 - L1MDa LINE L1 -2860 3680 2632 951 189 21 12 chr10 107305645 107305888 -38283400 + L1MDa LINE L1 1134 1378 -5162 * 6854 205 42 30 chr10 107305875 107307562 -38281726 - L1MDa LINE L1 -4417 2123 416 21 57 0 0 chr10 107307713 107307748 -38281540 + GC_rich Low_complexity Low_complexity 1 35 0 38 96 0 0 chr10 107307766 107307881 -38281407 + GC_rich Low_complexity Low_complexity 1 115 0 435 171 261 18 chr10 107308916 107309027 -38280261 + MIR SINE MIR 12 149 -113 238 254 16 16 chr10 107309063 107309126 -38280162 + CT-rich Low_complexity Low_complexity 4 66 0 221 286 104 78 chr10 107309238 107309469 -38279819 - L2 LINE L2 -182 3090 2854 301 271 148 8 chr10 107309723 107309845 -38279443 - MIR3 SINE MIR -10 198 60 1845 143 32 7 chr10 107310414 107310739 -38278549 + AluSq SINE Alu 1 332 0 927 226 29 10 chr10 107310761 107310969 -38278319 - MIR SINE MIR -43 219 8 243 257 188 30 chr10 107310978 107311079 -38278209 - L2 LINE L2 -3 3310 3194 264 313 150 0 chr10 107311717 107311864 -38277424 + L2 LINE L2 2887 3055 -217 257 260 154 48 chr10 107311873 107311977 -38277311 + L2 LINE L2 3158 3272 0 310 219 19 161 chr10 107312002 107312080 -38277208 - MIR3 SINE MIR -10 198 151 2339 100 0 7 chr10 107312080 107312390 -38276898 + AluSg1 SINE Alu 1 308 -1 310 219 19 161 chr10 107312390 107312466 -38276822 - MIR3 SINE MIR -57 151 66 737 240 86 32 chr10 107312683 107312904 -38276384 - MIR SINE MIR -1 261 29 1259 194 3 82 chr10 107313112 107313416 -38275872 - L1MDa LINE L1 -6257 283 4 720 227 53 56 chr10 107313391 107313570 -38275718 - L1M4 LINE L1 -2521 4019 3841 * 2156 137 0 9 chr10 107313570 107313885 -38275403 - AluSx SINE Alu 0 312 1 720 227 53 56 chr10 107313885 107314079 -38275209 - L1M4 LINE L1 -2699 3841 3647 416 359 71 30 chr10 107314195 107314788 -38274500 - HERV16 LTR ERVL -4341 655 39 619 280 72 49 chr10 107314814 107315121 -38274167 - LTR16C LTR ERVL -4 487 174 1232 222 119 19 chr10 107315463 107315882 -38273406 + MLT1C LTR MaLR 7 467 0 191 129 32 0 chr10 107317326 107317357 -38271931 - MER5B DNA MER1_type 0 178 147 2597 180 39 75 chr10 107317450 107317490 -38271798 - MLT2B3 LTR ERVL -2 552 512 363 44 0 0 chr10 107317490 107317535 -38271753 + (TC)n Simple_repeat Simple_repeat 1 45 0 2597 180 39 75 chr10 107317535 107318066 -38271222 - MLT2B3 LTR ERVL -42 512 2 184 286 89 0 chr10 107318234 107318290 -38270998 + L2 LINE L2 3248 3308 -5 226 296 37 58 chr10 107318352 107318430 -38270858 + L1MC/D LINE L1 5750 5828 -1980 3683 106 21 0 chr10 107318430 107318959 -38270329 + L1PA15 LINE L1 5625 6164 -1 226 296 37 58 chr10 107318959 107319069 -38270219 + L1MC/D LINE L1 5828 5934 -1874 2313 103 0 3 chr10 107319097 107319398 -38269890 - AluSq SINE Alu -13 300 1 1165 191 102 40 chr10 107319601 107319790 -38269498 - MER2 DNA MER2_type -1 344 125 1581 95 41 5 chr10 107319790 107320011 -38269277 - MER30 DNA MER1_type -1 229 1 1165 191 102 40 chr10 107320011 107320145 -38269143 - MER2 DNA MER2_type -220 125 1 268 304 131 18 chr10 107320265 107320433 -38268855 - MER5A DNA MER1_type 0 189 3 21 57 0 0 chr10 107321745 107321780 -38267508 + AT_rich Low_complexity Low_complexity 1 35 0 658 325 37 4 chr10 107321797 107322040 -38267248 - MIR SINE MIR -4 258 8 2047 228 40 37 chr10 107322797 107323394 -38265894 + L1ME1 LINE L1 5527 6125 -41 35 0 0 0 chr10 107325391 107325426 -38263862 + AT_rich Low_complexity Low_complexity 1 35 0 1793 149 4 0 chr10 107325426 107325688 -38263600 - AluJb SINE Alu -47 265 3 1379 208 287 19 chr10 107325788 107326404 -38262884 + LTR50 LTR ERVL 15 795 0 490 289 23 52 chr10 107326947 107327120 -38262168 - MIR3 SINE MIR -11 197 30 479 277 28 23 chr10 107327839 107328016 -38261272 + MER5B DNA MER1_type 1 178 0 1146 24 42 0 chr10 107328531 107328696 -38260592 + (TCTA)n Simple_repeat Simple_repeat 3 174 0 255 60 60 0 chr10 107329184 107329234 -38260054 + (TAGA)n Simple_repeat Simple_repeat 3 55 0 509 356 46 13 chr10 107329510 107329749 -38259539 - MIR SINE MIR -15 247 1 290 299 103 0 chr10 107331416 107331513 -38257775 + MER91B DNA MER1_type 4 110 -80 360 271 21 21 chr10 107331544 107331640 -38257648 + MER91B DNA MER1_type 94 189 -1 608 298 78 19 chr10 107333001 107333099 -38256189 - MIR SINE MIR 0 262 171 1317 225 78 23 chr10 107333099 107333445 -38255843 - MLT1A1 LTR MaLR 0 365 1 608 298 78 19 chr10 107333445 107333551 -38255737 - MIR SINE MIR -91 171 46 262 296 101 26 chr10 107333928 107334051 -38255237 + MER5A DNA MER1_type 36 187 -2 240 241 63 25 chr10 107333982 107334061 -38255227 - MER5A DNA MER1_type -101 88 7 * 278 297 84 30 chr10 107334304 107334506 -38254782 + L2 LINE L2 2716 2928 -386 271 310 35 0 chr10 107334685 107334772 -38254516 + L2 LINE L2 3144 3233 -39 269 172 17 35 chr10 107335013 107335071 -38254217 + L2 LINE L2 3003 3059 -254 440 256 78 93 chr10 107335211 107335675 -38253613 - MLT1K LTR MaLR 0 588 132 1047 97 185 5 chr10 107335930 107336125 -38253163 - MER30 DNA MER1_type 0 230 1 * 1983 172 43 15 chr10 107336125 107336169 -38253119 - MSTA LTR MaLR -23 405 364 1777 153 14 11 chr10 107336169 107336480 -38252808 + AluJo SINE Alu 1 312 0 1983 172 43 15 chr10 107336480 107336828 -38252460 - MSTA LTR MaLR -64 364 1 407 250 58 10 chr10 107336829 107336933 -38252355 - MIR SINE MIR -131 131 23 740 250 27 18 chr10 107337052 107337272 -38252016 - MLT1I LTR MaLR 0 409 188 2177 104 7 0 chr10 107337848 107338152 -38251136 - AluSx SINE Alu 0 306 1 344 271 132 21 chr10 107339945 107340089 -38249199 + MIR3 SINE MIR 3 162 -46 974 106 0 0 chr10 107340717 107340849 -38248439 + FLAM_C SINE Alu 1 132 -1 1977 102 16 0 chr10 107342005 107342259 -38247029 + AluSq SINE Alu 1 258 -55 219 322 11 23 chr10 107342487 107342574 -38246714 + MIR3 SINE MIR 86 171 -37 341 248 133 0 chr10 107342679 107342784 -38246504 + MER94 DNA DNA 8 126 -8 411 314 65 18 chr10 107343095 107343264 -38246024 - MIR SINE MIR -50 212 36 356 252 63 36 chr10 107344087 107344198 -38245090 - L2 LINE L2 0 3272 3159 224 271 51 0 chr10 107345235 107345294 -38243994 + MIR SINE MIR 89 150 -112 804 271 45 9 chr10 107345424 107345645 -38243643 - MIR SINE MIR -6 256 28 409 278 159 7 chr10 107345938 107346089 -38243199 - MIR SINE MIR -66 196 23 318 267 24 88 chr10 107346192 107346375 -38242913 - MIR SINE MIR -54 208 31 279 240 0 0 chr10 107346885 107346935 -38242353 - L2 LINE L2 -20 3293 3244 * 824 291 79 0 chr10 107346930 107347157 -38242131 + MIR SINE MIR 16 260 -2 1275 227 160 12 chr10 107348331 107348762 -38240526 + MLT1D LTR MaLR 3 497 -8 187 238 24 0 chr10 107349654 107349696 -38239592 + MER5A DNA MER1_type 147 189 0 352 291 8 52 chr10 107350759 107350893 -38238395 - L2 LINE L2 -2 3270 3143 222 344 112 0 chr10 107351591 107351716 -38237572 + MIR SINE MIR 122 260 -2 509 299 92 27 chr10 107351899 107352237 -38237051 + L2 LINE L2 2913 3272 0 238 229 100 14 chr10 107352330 107352400 -38236888 - MIR SINE MIR -86 122 47 432 227 0 0 chr10 107352652 107352740 -38236548 - MIR SINE MIR -129 133 46 189 342 25 13 chr10 107353394 107353473 -38235815 + L2 LINE L2 3193 3272 0 1592 279 43 17 chr10 107353513 107354046 -38235242 + MLT1H LTR MaLR 3 549 0 232 357 41 10 chr10 107354234 107354332 -38234956 - L2 LINE L2 -4 3268 3168 893 284 159 90 chr10 107354653 107354885 -38234403 + L3 LINE CR1 810 1025 -552 2175 112 3 3 chr10 107354885 107355179 -38234109 - AluSx SINE Alu -18 294 1 893 284 159 90 chr10 107355179 107355658 -38233630 + L3 LINE CR1 1025 1570 -7 2067 125 4 0 chr10 107356219 107356525 -38232763 - AluSx SINE Alu 0 308 2 999 263 51 0 chr10 107356552 107356788 -38232500 - MIR SINE MIR -2 260 13 358 245 10 51 chr10 107358184 107358282 -38231006 + MIR3 SINE MIR 115 208 0 201 303 225 28 chr10 107358712 107358930 -38230358 + MIR SINE MIR 2 262 0 544 262 56 81 chr10 107359202 107359513 -38229775 - MLT1H LTR MaLR 0 409 119 2063 121 0 7 chr10 107359513 107359794 -38229494 + AluSx SINE Alu 1 279 -33 544 262 56 81 chr10 107359794 107359888 -38229400 - MLT1H LTR MaLR -290 119 24 427 224 67 36 chr10 107361202 107361367 -38227921 + L1ME4a LINE L1 5952 6121 0 555 297 48 65 chr10 107361643 107361997 -38227291 + L1ME4a LINE L1 5550 5897 -224 480 360 27 5 chr10 107363110 107363296 -38225992 - MIR SINE MIR -53 209 20 3282 205 74 124 chr10 107363764 107364871 -38224417 - L1MC4 LINE L1 -2 8040 6879 1614 88 31 18 chr10 107364871 107365098 -38224190 - MER30 DNA MER1_type 0 230 1 3282 205 74 124 chr10 107365098 107365503 -38223785 - L1MC4 LINE L1 -1163 6879 6616 226 0 59 0 chr10 107365503 107365537 -38223751 + (TCTA)n Simple_repeat Simple_repeat 2 37 0 3282 205 74 124 chr10 107365537 107365688 -38223600 - L1MC4 LINE L1 -1426 6616 6459 206 206 0 0 chr10 107365806 107365840 -38223448 + polypurine Low_complexity Low_complexity 4 37 0 1673 156 22 64 chr10 107365965 107366279 -38223009 - AluJb SINE Alu -11 301 1 345 136 17 0 chr10 107366553 107366612 -38222676 - MER69 DNA AcHobo -11 2515 2456 318 287 52 17 chr10 107367411 107367526 -38221762 + MIR SINE MIR 43 161 -101 712 252 6 0 chr10 107367585 107367744 -38221544 - MIR SINE MIR -31 231 72 2177 108 0 20 chr10 107368231 107368527 -38220761 + AluSg SINE Alu 1 290 -20 314 243 45 19 chr10 107368806 107368975 -38220313 + MIR SINE MIR 23 230 -32 1137 216 34 18 chr10 107369078 107369406 -38219882 - L1ME1 LINE L1 -5 6161 5829 195 271 146 0 chr10 107369676 107369724 -38219564 - MER5B DNA MER1_type -60 118 64 2344 113 0 0 chr10 107369809 107370111 -38219177 + AluSx SINE Alu 1 302 -10 377 317 108 16 chr10 107370973 107371159 -38218129 + L2 LINE L2 2503 2705 -609 300 320 111 7 chr10 107371191 107371344 -38217944 + L1ME4a LINE L1 5952 6120 -1 262 366 74 6 chr10 107371422 107371597 -38217691 + L3 LINE CR1 1284 1470 -107 1480 151 39 8 chr10 107371731 107371990 -38217298 - L1PB4 LINE L1 -2 6154 5888 2352 107 0 7 chr10 107372021 107372330 -38216958 - AluSc SINE Alu -2 307 1 257 136 23 0 chr10 107372926 107372970 -38216318 + L2 LINE L2 3261 3305 -8 224 276 206 55 chr10 107373339 107373538 -38215750 + MIR SINE MIR 12 240 -22 323 326 21 0 chr10 107373658 107373753 -38215535 - MIR3 SINE MIR -25 183 87 2311 123 0 3 chr10 107373769 107374078 -38215210 + AluSx SINE Alu 1 308 -4 242 195 0 172 chr10 107375439 107375526 -38213762 + MIR SINE MIR 117 188 -74 440 321 80 11 chr10 107375659 107375846 -38213442 + L2 LINE L2 3114 3313 0 1765 116 119 7 chr10 107375924 107376201 -38213087 - AluSg1 SINE Alu -1 308 1 1897 211 38 4 chr10 107376220 107376689 -38212599 - L1PA13 LINE L1 -4702 2085 1601 1022 274 7 11 chr10 107376734 107377019 -38212269 - L1PA13 LINE L1 -5181 1606 1323 406 253 213 13 chr10 107377617 107377767 -38211521 + L1M3 LINE L1 5627 5806 -377 405 231 92 8 chr10 107377856 107377986 -38211302 - MIR SINE MIR 0 262 122 1993 134 28 3 chr10 107377986 107378277 -38211011 + AluSg SINE Alu 1 298 -12 370 213 21 21 chr10 107378406 107378500 -38210788 + L3 LINE CR1 1403 1496 -81 198 71 0 0 chr10 107378600 107378628 -38210660 + (TTAA)n Simple_repeat Simple_repeat 1 28 0 200 275 0 0 chr10 107378628 107378668 -38210620 + polypurine Low_complexity Low_complexity 6 45 0 1334 204 5 104 chr10 107378980 107379024 -38210264 + MLT1A2 LTR MaLR 4 51 -323 1857 184 50 81 chr10 107379024 107379589 -38209699 - LTR10B LTR ERV1 0 547 1 1334 204 5 104 chr10 107379589 107379956 -38209332 + MLT1A2 LTR MaLR 51 374 0 578 286 85 5 chr10 107379991 107380180 -38209108 + MIR SINE MIR 51 254 -8 6071 58 37 13 chr10 107380220 107380982 -38208306 + LTR17 LTR ERV1 1 780 0 2255 128 0 0 chr10 107382125 107382430 -38206858 - AluSx SINE Alu -7 305 1 1646 90 14 5 chr10 107382467 107382679 -38206609 + AluSc SINE Alu 1 214 -95 385 319 81 1 chr10 107383114 107383303 -38205985 + MIR SINE MIR 41 248 -14 489 213 0 0 chr10 107383317 107383411 -38205877 + L1MD2 LINE L1 6049 6142 -217 195 42 0 0 chr10 107383499 107383523 -38205765 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 241 259 28 21 chr10 107383789 107383932 -38205356 + (CACCC)n Simple_repeat Simple_repeat 3 146 0 254 206 33 43 chr10 107384754 107384846 -38204442 + L1ME4a LINE L1 5490 5580 -541 197 283 113 28 chr10 107384984 107385090 -38204198 + MIR SINE MIR 68 182 -80 1483 202 136 38 chr10 107387932 107388506 -38200782 - L1MC5 LINE L1 -33 7928 7299 2326 99 0 0 chr10 107388566 107388858 -38200430 - AluY SINE Alu -11 300 9 2091 112 76 22 chr10 107388879 107389235 -38200053 - THE1C LTR MaLR 0 375 1 225 309 82 10 chr10 107389252 107389349 -38199939 - L2 LINE L2 -609 2705 2602 309 234 65 13 chr10 107390559 107390636 -38198652 + MIR SINE MIR 67 147 -115 2548 71 3 0 chr10 107390654 107390964 -38198324 + AluY SINE Alu 1 311 0 582 262 6 11 chr10 107391434 107391617 -38197671 - L1ME4a LINE L1 -293 5828 5647 302 313 76 21 chr10 107391756 107391900 -38197388 - L1ME4a LINE L1 -2338 5470 5319 513 230 37 0 chr10 107392809 107392944 -38196344 + L1ME4a LINE L1 5770 5909 -212 369 303 78 14 chr10 107392966 107393108 -38196180 + L1ME4a LINE L1 5969 6119 -2 2242 113 0 28 chr10 107393120 107393439 -38195849 - AluSg SINE Alu 0 310 1 435 235 7 13 chr10 107393508 107393661 -38195627 + CT-rich Low_complexity Low_complexity 1 152 0 203 345 48 12 chr10 107393935 107394019 -38195269 - MIR SINE MIR -8 254 168 2042 122 14 4 chr10 107394650 107394948 -38194340 - AluSx SINE Alu 0 301 1 1644 152 8 8 chr10 107395833 107396097 -38193191 + AluJb SINE Alu 21 284 -28 356 203 13 0 chr10 107397389 107397468 -38191820 - Charlie5 DNA MER1_type -27 2585 2506 1767 155 7 17 chr10 107397472 107397762 -38191526 + AluJb SINE Alu 1 287 -25 516 122 0 0 chr10 107397762 107397844 -38191444 + (GGAA)n Simple_repeat Simple_repeat 1 82 0 845 117 111 0 chr10 107397846 107398008 -38191280 - Charlie5 DNA MER1_type -109 2503 2324 1360 164 17 17 chr10 107398014 107398246 -38191042 - AluJo SINE Alu 0 312 81 283 278 11 0 chr10 107398839 107398929 -38190359 + L1MB7 LINE L1 6076 6166 -18 2399 91 3 7 chr10 107399102 107399411 -38189877 - AluSx SINE Alu -4 308 1 454 304 117 22 chr10 107399415 107399645 -38189643 + L2 LINE L2 2941 3192 -80 1262 242 199 9 chr10 107400586 107401225 -38188063 + L2 LINE L2 2310 3066 -247 209 257 73 46 chr10 107402621 107402730 -38186558 + L2 LINE L2 2949 3060 -212 441 226 111 127 chr10 107403032 107403456 -38185832 + MLT1H LTR MaLR 4 420 -129 337 226 172 0 chr10 107403649 107403742 -38185546 + MIR SINE MIR 31 139 -69 476 303 170 38 chr10 107404697 107405692 -38183596 + L2 LINE L2 2132 3272 0 333 0 0 0 chr10 107406021 107406058 -38183230 + (CA)n Simple_repeat Simple_repeat 2 38 0 229 196 0 22 chr10 107406272 107406318 -38182970 + GA-rich Low_complexity Low_complexity 1 45 0 385 316 30 15 chr10 107406372 107406505 -38182783 + MIR SINE MIR 2 136 -126 517 282 106 9 chr10 107407038 107407265 -38182023 + MIR SINE MIR 14 262 0 342 311 66 0 chr10 107407389 107407495 -38181793 + L2 LINE L2 3149 3261 -11 281 232 95 114 chr10 107407581 107407844 -38181444 + MLT1H LTR MaLR 51 308 -241 334 311 19 0 chr10 107407998 107408101 -38181187 - MER117 DNA MER1_type -3 194 90 493 342 50 26 chr10 107408295 107408634 -38180654 + LTR16C LTR ERVL 122 468 -23 2490 85 0 0 chr10 107409348 107409654 -38179634 - AluSx SINE Alu 0 312 7 195 211 39 39 chr10 107410265 107410317 -38178971 + MER5B DNA MER1_type 3 54 -124 2036 151 0 16 chr10 107410331 107410648 -38178640 + AluJb SINE Alu 1 312 0 256 213 0 0 chr10 107410654 107410701 -38178587 - MER5B DNA MER1_type -131 47 1 653 193 17 11 chr10 107411961 107412137 -38177151 + (CATAC)n Simple_repeat Simple_repeat 4 180 0 488 240 145 30 chr10 107412154 107412220 -38177068 - MIR SINE MIR -23 239 182 6058 146 85 11 chr10 107412220 107412449 -38176839 - Tigger3b DNA MER2_type -1797 1231 1020 2327 104 0 7 chr10 107412449 107412758 -38176530 + AluSg SINE Alu 1 307 -3 6058 146 85 11 chr10 107412758 107413674 -38175614 - Tigger3b DNA MER2_type -2008 1020 1 488 240 145 30 chr10 107413674 107413807 -38175481 - MIR SINE MIR -80 182 17 802 263 184 12 chr10 107414084 107414411 -38174877 + L2 LINE L2 2931 3313 0 198 347 182 9 chr10 107414428 107414653 -38174635 + L3 LINE CR1 1300 1563 -14 182 323 95 26 chr10 107414801 107414990 -38174298 + L2 LINE L2 2584 2785 -529 372 244 266 44 chr10 107415024 107415389 -38173899 + L2 LINE L2 2868 3313 0 2252 180 5 0 chr10 107415530 107415931 -38173357 + MER57A LTR ERV1 1 403 0 233 274 29 20 chr10 107416210 107416312 -38172976 + MER5A DNA MER1_type 3 105 -84 245 180 0 20 chr10 107416917 107416967 -38172321 + MIR SINE MIR 109 157 -105 * 342 296 87 11 chr10 107416957 107417168 -38172120 - MIR SINE MIR 0 262 2 252 250 181 17 chr10 107417269 107417385 -38171903 + MIR SINE MIR 9 143 -119 384 287 147 0 chr10 107417508 107417651 -38171637 - L3 LINE CR1 -431 1146 983 2394 80 3 3 chr10 107418088 107418390 -38170898 + AluY SINE Alu 1 302 -9 455 248 12 81 chr10 107419929 107420090 -38169198 + MIR SINE MIR 101 250 -12 656 273 73 5 chr10 107420294 107420499 -38168789 - MIR SINE MIR -27 235 17 1455 253 44 7 chr10 107420521 107421039 -38168249 + MER90 LTR ERV1 1 607 -7 288 273 238 6 chr10 107421077 107421249 -38168039 - MIR SINE MIR 0 262 51 2235 113 0 0 chr10 107421273 107421589 -38167699 + AluSq SINE Alu 1 316 0 218 281 52 31 chr10 107423153 107423249 -38166039 - MER5A DNA MER1_type -1 188 91 221 267 61 46 chr10 107423446 107423577 -38165711 + MIR SINE MIR 18 150 -58 216 302 16 0 chr10 107423997 107424060 -38165228 + MER5A DNA MER1_type 110 173 -16 2760 209 95 25 chr10 107424379 107424911 -38164377 - MER63C DNA MER1_type -131 929 318 2379 75 0 14 chr10 107424911 107425238 -38164050 + AluSg SINE Alu 1 310 0 2760 209 95 25 chr10 107425238 107425529 -38163759 - MER63C DNA MER1_type -742 318 49 225 174 0 0 chr10 107425548 107425594 -38163694 - LTR66 LTR ERVL -171 439 394 * 269 256 0 64 chr10 107425577 107425655 -38163633 - MER63C DNA MER1_type -857 73 1 278 275 123 14 chr10 107426181 107426319 -38162969 - MIR3 SINE MIR -23 185 33 206 219 53 0 chr10 107426885 107426969 -38162319 - MIR3 SINE MIR -18 190 100 186 303 135 0 chr10 107428286 107428375 -38160913 + MER5B DNA MER1_type 3 103 -75 252 216 425 0 chr10 107428507 107428660 -38160628 - MIR SINE MIR 0 262 45 187 300 200 0 chr10 107429815 107429905 -38159383 + MIR SINE MIR 60 167 -95 216 238 12 38 chr10 107430823 107430903 -38158385 + GA-rich Low_complexity Low_complexity 1 78 0 2159 140 0 7 chr10 107431915 107432223 -38157065 + AluJo SINE Alu 7 312 0 1366 249 25 8 chr10 107432694 107433052 -38156236 + L1ME4a LINE L1 5559 5922 -199 566 311 56 0 chr10 107433181 107433361 -38155927 - MIR SINE MIR -27 235 46 417 20 0 0 chr10 107433444 107433494 -38155794 + (CA)n Simple_repeat Simple_repeat 2 51 0 220 182 45 0 chr10 107433677 107433721 -38155567 - L2 LINE L2 -6 3307 3262 279 234 112 28 chr10 107434620 107434727 -38154561 + MER103 DNA DNA 9 124 -42 369 317 19 0 chr10 107436693 107436797 -38152491 + MIR SINE MIR 48 153 -109 463 200 70 54 chr10 107438197 107438224 -38151064 + L1ME4a LINE L1 5934 5959 -162 306 0 0 0 chr10 107438224 107438258 -38151030 + (TG)n Simple_repeat Simple_repeat 2 35 0 463 200 70 54 chr10 107438258 107438415 -38150873 + L1ME4a LINE L1 5959 6121 0 254 179 0 71 chr10 107439158 107439214 -38150074 - L2 LINE L2 0 3272 3221 783 203 18 6 chr10 107439725 107439888 -38149400 + MER5B DNA MER1_type 1 165 -13 367 221 229 14 chr10 107439922 107440062 -38149226 - MER5B DNA MER1_type 0 178 9 2518 74 0 0 chr10 107440317 107440615 -38148673 - AluSx SINE Alu -9 303 6 24 53 0 0 chr10 107440728 107440766 -38148522 + AT_rich Low_complexity Low_complexity 1 38 0 540 329 59 8 chr10 107441629 107441866 -38147422 - MIR SINE MIR -8 254 6 205 418 14 7 chr10 107443084 107443225 -38146063 - L2 LINE L2 -220 3052 2911 1328 193 40 11 chr10 107443230 107443557 -38145731 - MER33 DNA MER1_type -2 322 1 293 346 23 15 chr10 107443566 107443696 -38145592 - L2 LINE L2 -420 2894 2764 328 309 77 73 chr10 107443705 107443951 -38145337 + L2 LINE L2 3026 3272 0 818 250 32 51 chr10 107443970 107444342 -38144946 - L1MEd LINE L1 -5089 1030 666 824 198 5 69 chr10 107444354 107444431 -38144857 + MER5A DNA MER1_type 1 81 -108 2514 76 3 0 chr10 107444431 107444732 -38144556 + AluSg SINE Alu 1 302 -8 824 198 5 69 chr10 107444732 107444856 -38144432 + MER5A DNA MER1_type 81 189 0 25 31 0 0 chr10 107444923 107444955 -38144333 + AT_rich Low_complexity Low_complexity 1 32 0 483 326 41 6 chr10 107446456 107446628 -38142660 + MIR3 SINE MIR 20 197 -11 732 271 73 17 chr10 107447551 107447853 -38141435 + L1ME4a LINE L1 5565 5883 -238 288 234 85 35 chr10 107447889 107448030 -38141258 + L1ME4a LINE L1 5962 6109 -12 505 287 140 28 chr10 107448458 107448744 -38140544 + L2 LINE L2 2992 3309 -4 1720 185 32 18 chr10 107448896 107449237 -38140051 + MER7A DNA MER2_type 2 345 -1 1958 133 23 47 chr10 107449280 107449664 -38139624 + THE1C LTR MaLR 1 375 0 9858 118 20 31 chr10 107449664 107451261 -38138027 + THE1C-int LTR MaLR 1 1580 0 2080 118 26 47 chr10 107451261 107451644 -38137644 + THE1C LTR MaLR 1 375 0 587 258 73 38 chr10 107451732 107452190 -38137098 + L1ME4a LINE L1 5615 6120 -1 27 29 0 0 chr10 107452373 107452407 -38136881 + AT_rich Low_complexity Low_complexity 1 34 0 3041 196 88 24 chr10 107452791 107453959 -38135329 + L1ME1 LINE L1 4924 6159 -7 1902 142 45 7 chr10 107453998 107454286 -38135002 - AluJb SINE Alu -13 299 1 238 304 244 15 chr10 107454808 107455009 -38134279 - MIR SINE MIR -10 252 6 2373 69 0 14 chr10 107455229 107455554 -38133734 + AluSx SINE Alu 1 321 0 392 244 157 9 chr10 107458522 107458637 -38130651 - MIR3 SINE MIR -62 146 15 1167 177 87 20 chr10 107459305 107459737 -38129551 - L1M4 LINE L1 -625 5553 5099 1932 144 23 49 chr10 107459747 107459927 -38129361 - L1MB3 LINE L1 0 6183 6000 1985 131 4 0 chr10 107459927 107460201 -38129087 + AluSg SINE Alu 1 275 -35 231 61 0 0 chr10 107460206 107460239 -38129049 + (CAA)n Simple_repeat Simple_repeat 1 33 0 1932 144 23 49 chr10 107460239 107460483 -38128805 - L1MB3 LINE L1 -187 5996 5764 219 189 0 38 chr10 107460855 107460908 -38128380 + (CAGAGA)n Simple_repeat Simple_repeat 4 54 0 1819 251 51 22 chr10 107461721 107462081 -38127207 + L1ME3A LINE L1 5602 5985 -185 1840 174 17 0 chr10 107462081 107462368 -38126920 + AluJo SINE Alu 1 292 -20 1819 251 51 22 chr10 107462368 107462560 -38126728 + L1ME3A LINE L1 5985 6170 0 202 345 0 0 chr10 107462653 107462711 -38126577 + GA-rich Low_complexity Low_complexity 2 59 0 1299 239 147 21 chr10 107462711 107463238 -38126050 + MLT1E LTR MaLR 1 593 0 245 306 93 9 chr10 107463426 107463534 -38125754 + MIR SINE MIR 37 153 -109 554 305 69 30 chr10 107464333 107464566 -38124722 - MIR SINE MIR 0 262 21 403 240 18 13 chr10 107465369 107465479 -38123809 + MLT1F1 LTR MaLR 63 181 -380 5024 162 59 9 chr10 107465485 107466677 -38122611 + L1MB7 LINE L1 4942 6179 -5 1941 139 7 3 chr10 107466685 107466995 -38122293 - AluSx SINE Alu -1 311 1 44 0 0 0 chr10 107467026 107467070 -38122218 + AT_rich Low_complexity Low_complexity 1 44 0 1442 211 150 3 chr10 107467215 107467561 -38121727 + MLT1F1 LTR MaLR 163 559 -8 246 32 0 0 chr10 107468126 107468157 -38121131 + (TTTA)n Simple_repeat Simple_repeat 4 34 0 1700 164 0 0 chr10 107468157 107468437 -38120851 - AluJb SINE Alu -32 280 1 221 292 85 15 chr10 107468441 107468496 -38120792 - MIR SINE MIR -88 174 124 4233 61 94 62 chr10 107468496 107468807 -38120481 + PABL_A LTR ERV1 1 301 -359 2075 85 0 39 chr10 107468807 107469113 -38120175 + AluY SINE Alu 1 294 -17 4233 61 94 62 chr10 107469113 107469441 -38119847 + PABL_A LTR ERV1 301 660 0 221 292 85 15 chr10 107469441 107469515 -38119773 - MIR SINE MIR -138 124 36 416 273 176 6 chr10 107470834 107471010 -38118278 - MIR SINE MIR -6 256 51 209 56 0 28 chr10 107471428 107471464 -38117824 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 208 353 0 20 chr10 107472599 107472701 -38116587 + GA-rich Low_complexity Low_complexity 4 103 0 320 344 108 2 chr10 107472707 107472902 -38116386 - MIR SINE MIR -30 232 20 268 311 0 22 chr10 107472987 107473077 -38116211 - LTR67 LTR ERVL -13 544 457 318 292 70 41 chr10 107473696 107473867 -38115421 + MIR SINE MIR 21 196 -66 259 208 75 0 chr10 107474894 107474947 -38114341 + L2 LINE L2 3208 3264 -49 2122 110 10 7 chr10 107476324 107476634 -38112654 + AluSx SINE Alu 1 311 -1 1256 205 113 59 chr10 107478002 107478272 -38111016 - MLT1C LTR MaLR 0 467 162 351 0 0 0 chr10 107478272 107478311 -38110977 + (TG)n Simple_repeat Simple_repeat 2 40 0 1256 205 113 59 chr10 107478311 107478483 -38110805 - MLT1C LTR MaLR -305 162 1 297 229 0 0 chr10 107478641 107478702 -38110586 + MIR SINE MIR 85 145 -63 517 223 11 0 chr10 107479282 107479376 -38109912 + MER81 DNA DNA 20 114 0 21 0 0 0 chr10 107481991 107482012 -38107276 + AT_rich Low_complexity Low_complexity 1 21 0 1248 271 94 22 chr10 107482211 107482347 -38106941 - L1MEc LINE L1 -3171 3044 2919 467 17 17 0 chr10 107482347 107482407 -38106881 + (TCTA)n Simple_repeat Simple_repeat 4 64 0 1248 271 94 22 chr10 107482407 107483404 -38105884 - L1MEc LINE L1 -3296 2919 1877 402 246 27 27 chr10 107484060 107484170 -38105118 - MIR3 SINE MIR -4 204 95 501 231 14 56 chr10 107484775 107484918 -38104370 + MLT1J1 LTR MaLR 310 446 0 2418 67 0 3 chr10 107485873 107486185 -38103103 + AluY SINE Alu 1 311 0 330 262 112 70 chr10 107486456 107486643 -38102645 + MIR SINE MIR 7 201 -61 264 280 121 30 chr10 107488467 107488599 -38100689 + MIR SINE MIR 40 183 -79 624 207 124 74 chr10 107491506 107491723 -38097565 - MIR SINE MIR -4 258 31 1520 163 75 18 chr10 107492009 107492291 -38096997 + AluJo SINE Alu 1 298 -14 230 294 15 15 chr10 107493322 107493390 -38095898 + L2 LINE L2 2689 2756 -558 248 326 11 34 chr10 107493643 107493732 -38095556 + MIR SINE MIR 54 140 -122 2213 115 0 0 chr10 107493814 107494143 -38095145 - AluSx SINE Alu 0 329 1 502 320 84 71 chr10 107494182 107494933 -38094355 + L2 LINE L2 1929 2689 -625 1851 144 0 10 chr10 107495184 107495483 -38093805 + AluJo SINE Alu 1 296 -16 2230 102 3 0 chr10 107495501 107495806 -38093482 + AluSg SINE Alu 1 306 -4 367 330 172 35 chr10 107496075 107496360 -38092928 + L2 LINE L2 2949 3272 0 633 281 59 20 chr10 107496888 107497091 -38092197 - MIR SINE MIR 0 262 52 343 325 44 0 chr10 107497164 107497278 -38092010 - MIR SINE MIR -98 164 46 2369 78 3 0 chr10 107497996 107498302 -38090986 + AluSg SINE Alu 1 307 -3 385 239 43 11 chr10 107498319 107498411 -38090877 + MIR3 SINE MIR 89 183 -25 259 273 67 80 chr10 107498476 107498810 -38090478 + L2 LINE L2 2686 3014 -258 194 353 66 8 chr10 107499026 107499148 -38090140 + MIR SINE MIR 20 148 -60 238 178 0 22 chr10 107499149 107499194 -38090094 + G-rich Low_complexity Low_complexity 4 47 0 222 37 0 0 chr10 107501767 107501794 -38087494 + (TG)n Simple_repeat Simple_repeat 1 27 0 1083 134 23 0 chr10 107502894 107503066 -38086222 - MER5B DNA MER1_type 0 178 3 220 216 0 0 chr10 107503840 107503891 -38085397 + (TA)n Simple_repeat Simple_repeat 2 52 0 376 318 121 34 chr10 107504278 107504542 -38084746 + L1ME LINE L1 4956 5242 -904 345 249 132 15 chr10 107504584 107504781 -38084507 + L1ME LINE L1 5285 5504 -617 2273 105 0 0 chr10 107504868 107505173 -38084115 + AluSx SINE Alu 1 305 -7 255 170 0 0 chr10 107505176 107505223 -38084065 + GA-rich Low_complexity Low_complexity 2 48 0 602 317 175 19 chr10 107505276 107505585 -38083703 + L3 LINE CR1 1151 1507 -70 2292 64 3 10 chr10 107506786 107507084 -38082204 - AluY SINE Alu -15 296 1 5609 21 3 0 chr10 107507518 107508149 -38081139 + L1PA3 LINE L1 5522 6154 -1 1914 142 3 0 chr10 107508174 107508463 -38080825 + AluSx SINE Alu 1 290 -22 334 256 58 0 chr10 107508485 107508571 -38080717 + L3b LINE CR1 1171 1261 -322 506 236 49 63 chr10 107508697 107508894 -38080394 + MIR3 SINE MIR 12 197 -59 2235 114 49 12 chr10 107509412 107509737 -38079551 + MER1B DNA MER1_type 1 337 0 632 315 161 22 chr10 107510085 107510488 -38078800 - L3 LINE CR1 -3 1574 1116 342 286 51 20 chr10 107511338 107511436 -38077852 - MIR SINE MIR -87 121 21 1951 114 24 7 chr10 107511759 107512049 -38077239 - AluSx SINE Alu -17 295 1 225 225 0 0 chr10 107512525 107512565 -38076723 - L2 LINE L2 -11 3302 3263 * 590 204 236 0 chr10 107512531 107512688 -38076600 - MIR SINE MIR -11 251 58 483 289 26 26 chr10 107512930 107513086 -38076202 - MIR3 SINE MIR -15 193 38 221 304 116 43 chr10 107513654 107513792 -38075496 - MIR3 SINE MIR -3 205 58 445 277 85 0 chr10 107513935 107514076 -38075212 + MER20 DNA MER1_type 62 214 -5 324 264 142 63 chr10 107514725 107515184 -38074104 - L1ME4a LINE L1 -13 6108 5614 1195 273 79 19 chr10 107515205 107515571 -38073717 + MLT1I LTR MaLR 22 409 0 499 270 85 31 chr10 107515575 107515834 -38073454 - L1ME4a LINE L1 -526 5595 5323 536 117 21 0 chr10 107515834 107515928 -38073360 + CT-rich Low_complexity Low_complexity 3 98 0 2086 79 4 0 chr10 107515933 107516198 -38073090 - AluSx SINE Alu -44 268 3 303 251 134 56 chr10 107516203 107516382 -38072906 - L1ME4a LINE L1 -840 5306 5114 234 310 28 69 chr10 107516801 107516946 -38072342 - MER5A DNA MER1_type -45 144 6 508 271 117 16 chr10 107518968 107519156 -38070132 + L3 LINE CR1 1363 1569 -8 282 333 83 0 chr10 107520007 107520115 -38069173 - L2 LINE L2 -1 3271 3155 190 299 86 34 chr10 107520835 107520952 -38068336 - L3 LINE CR1 -147 1430 1308 217 217 0 0 chr10 107521414 107521460 -38067828 + L2 LINE L2 3268 3313 0 270 0 0 0 chr10 107521923 107521953 -38067335 + (CA)n Simple_repeat Simple_repeat 2 31 0 225 267 142 42 chr10 107523284 107523404 -38065884 - MIR SINE MIR -65 197 66 2561 53 0 0 chr10 107523890 107524192 -38065096 + AluY SINE Alu 10 311 0 2456 125 28 0 chr10 107524461 107524860 -38064428 - L1MB3 LINE L1 0 6183 5774 13063 155 26 33 chr10 107524863 107525748 -38063540 - L1M4 LINE L1 -3399 2983 2093 4770 53 3 2 chr10 107525748 107526335 -38062953 - LTR10C LTR ERV1 -3 588 1 13063 155 26 33 chr10 107526335 107528429 -38060859 - L1M4 LINE L1 -4289 2093 19 21 57 0 0 chr10 107528665 107528700 -38060588 + AT_rich Low_complexity Low_complexity 1 35 0 1359 151 0 0 chr10 107528822 107529027 -38060261 - MER6B DNA MER2_type -1 209 5 345 249 52 3 chr10 107529262 107529400 -38059888 - L1MA4 LINE L1 -6 6299 6156 692 237 11 0 chr10 107529739 107529929 -38059359 + L1PB1 LINE L1 6 197 -6666 * 14077 182 17 17 chr10 107529926 107534583 -38054705 + L1PB1 LINE L1 1392 6091 -776 2365 106 0 0 chr10 107534583 107534895 -38054393 + AluSq SINE Alu 1 312 -1 14077 182 17 17 chr10 107534895 107535669 -38053619 + L1PB1 LINE L1 6091 6864 -3 2309 92 0 13 chr10 107536158 107536461 -38052827 + AluY SINE Alu 1 299 -12 649 280 37 3 chr10 107536602 107536851 -38052437 - L1ME3 LINE L1 -255 5907 5647 595 264 52 6 chr10 107536851 107537025 -38052263 + MER5A DNA MER1_type 2 183 -6 446 255 10 61 chr10 107537031 107537227 -38052061 - L1ME3 LINE L1 -514 5652 5467 689 300 88 20 chr10 107537229 107537785 -38051503 - L1ME3 LINE L1 -1036 5110 4517 1640 173 0 58 chr10 107538087 107538417 -38050871 - AluJo SINE Alu -1 311 1 224 185 19 0 chr10 107539391 107539445 -38049843 + CT-rich Low_complexity Low_complexity 1 55 0 207 287 103 0 chr10 107540043 107540130 -38049158 + L2 LINE L2 3150 3245 -27 628 334 112 41 chr10 107540157 107540692 -38048596 - L2 LINE L2 -87 3226 2618 2096 107 14 0 chr10 107540692 107540981 -38048307 + AluSc SINE Alu 6 298 -11 628 334 112 41 chr10 107540981 107541147 -38048141 - L2 LINE L2 -695 2618 2465 432 137 0 0 chr10 107541151 107541224 -38048064 - AluS SINE Alu -8 301 229 187 244 326 0 chr10 107541435 107541521 -38047767 - L2 LINE L2 0 3313 3200 513 71 0 0 chr10 107541547 107541617 -38047671 + (CA)n Simple_repeat Simple_repeat 2 71 0 27 0 0 0 chr10 107541681 107541708 -38047580 + AT_rich Low_complexity Low_complexity 1 27 0 2271 117 0 0 chr10 107541723 107542031 -38047257 + AluY SINE Alu 1 308 -3 225 275 14 14 chr10 107542060 107542129 -38047159 - MIR SINE MIR -14 248 180 271 172 35 92 chr10 107542389 107542476 -38046812 + L2 LINE L2 3186 3267 -5 934 339 40 8 chr10 107542555 107542930 -38046358 - MER115 DNA AcHobo -265 428 42 231 36 0 0 chr10 107543190 107543218 -38046070 + (TG)n Simple_repeat Simple_repeat 2 29 0 300 200 0 0 chr10 107543520 107543575 -38045713 + Tigger5 DNA MER2_type 1 55 -2268 340 244 12 0 chr10 107543585 107543671 -38045617 + Tigger5 DNA MER2_type 2237 2323 0 1242 225 84 22 chr10 107543672 107544059 -38045229 + L1M4 LINE L1 2854 3286 -2860 357 109 0 0 chr10 107544059 107544114 -38045174 + (CA)n Simple_repeat Simple_repeat 2 56 0 1242 225 84 22 chr10 107544114 107544273 -38045015 + L1M4 LINE L1 3286 3434 -2712 1477 183 91 10 chr10 107544277 107544686 -38044602 + L1MB8 LINE L1 5695 6136 -42 546 204 71 46 chr10 107544969 107545165 -38044123 + L1MC5 LINE L1 7709 7909 -52 451 156 44 88 chr10 107545202 107545362 -38043926 + L1MA7 LINE L1 6127 6279 -12 392 340 62 39 chr10 107545410 107545716 -38043572 + HAL1b LINE L1 351 663 -685 2361 103 0 0 chr10 107546231 107546533 -38042755 + AluSx SINE Alu 1 302 -10 932 200 107 58 chr10 107547058 107547423 -38041865 + MER113 DNA MER1_type? 139 521 0 262 350 29 19 chr10 107547441 107547544 -38041744 + MIR SINE MIR 28 131 -131 186 167 0 0 chr10 107547642 107547678 -38041610 + (TTA)n Simple_repeat Simple_repeat 3 38 0 1004 253 133 3 chr10 107549669 107549985 -38039303 + LTR18A LTR ERVL 1 357 0 246 300 25 12 chr10 107549985 107550055 -38039233 + MIR SINE MIR 8 81 -181 461 327 26 48 chr10 107550056 107550328 -38038960 - L3 LINE CR1 -212 1365 1100 1956 92 4 8 chr10 107550724 107550984 -38038304 + AluY SINE Alu 3 261 -50 186 304 96 24 chr10 107551261 107551309 -38037979 - MIR SINE MIR -122 140 84 814 190 37 141 chr10 107551309 107551551 -38037737 + MIR SINE MIR 2 218 -44 346 271 122 43 chr10 107551705 107551893 -38037395 + MIR SINE MIR 60 262 0 1973 142 4 0 chr10 107551942 107552246 -38037042 + AluSx SINE Alu 1 305 0 229 373 72 54 chr10 107553865 107554254 -38035034 - L2 LINE L2 -432 2882 2487 1589 135 41 55 chr10 107554572 107554935 -38034353 - L1MA8 LINE L1 -4 7706 7349 555 140 9 9 chr10 107554984 107555091 -38034197 - L1 LINE L1 -1860 4286 4180 * 2586 112 11 16 chr10 107555071 107555507 -38033781 - L1MA8 LINE L1 -342 7368 6935 5070 145 23 12 chr10 107555517 107555725 -38033563 - L1MA8 LINE L1 -1542 6023 5819 2552 59 0 3 chr10 107555725 107556030 -38033258 - AluY SINE Alu -7 304 1 5070 145 23 12 chr10 107556030 107556760 -38032528 - L1MA8 LINE L1 -1746 5819 5074 2166 237 15 56 chr10 107556781 107557422 -38031866 - L1MA8 LINE L1 -4291 3274 2608 2951 75 3 3 chr10 107557422 107557797 -38031491 - THE1C LTR MaLR 0 375 1 2166 237 15 56 chr10 107557797 107557943 -38031345 - L1MA8 LINE L1 -4957 2608 2458 2171 118 0 20 chr10 107557943 107558248 -38031040 + AluSx SINE Alu 1 299 -13 2230 122 16 0 chr10 107558256 107558559 -38030729 + AluSx SINE Alu 3 310 -2 2166 237 15 56 chr10 107558559 107558669 -38030619 - L1MA8 LINE L1 -5114 2451 2404 * 5844 216 138 21 chr10 107558667 107560442 -38028846 - L1MA8 LINE L1 -5043 2446 465 284 294 103 29 chr10 107560651 107560787 -38028501 - L2 LINE L2 -8 3305 3160 215 208 299 13 chr10 107561034 107561111 -38028177 - L2 LINE L2 -2 3311 3213 326 66 0 98 chr10 107561241 107561302 -38027986 - MLT2B1 LTR ERVL 0 520 466 186 209 0 0 chr10 107561318 107561361 -38027927 + (TA)n Simple_repeat Simple_repeat 2 44 0 345 299 9 9 chr10 107561380 107561487 -38027801 - L1MC4 LINE L1 -1322 6720 6614 * 368 258 11 0 chr10 107561412 107561501 -38027787 + L1MC4 LINE L1 6614 6703 -1339 2123 153 4 26 chr10 107561525 107561916 -38027372 - MLT2D LTR ERVL -20 534 1 577 186 39 31 chr10 107561916 107562045 -38027243 + HERVL40 LTR ERVL 5399 5528 -2 814 219 127 4 chr10 107562298 107562526 -38026762 + LTR40a LTR ERVL 264 519 0 656 233 0 0 chr10 107562882 107563015 -38026273 + HERVL40 LTR ERVL 985 1117 -4413 1883 176 49 77 chr10 107563016 107563572 -38025716 + L1ME4a LINE L1 4676 5215 -931 6467 138 68 45 chr10 107563576 107563995 -38025293 + L1MCa LINE L1 20 428 -5998 2196 95 10 3 chr10 107563995 107564291 -38024997 - AluSc SINE Alu -11 298 1 6467 138 68 45 chr10 107564291 107565151 -38024137 + L1MCa LINE L1 428 1328 -5098 21 36 0 0 chr10 107565274 107565302 -38023986 + AT_rich Low_complexity Low_complexity 1 28 0 355 298 135 22 chr10 107565357 107565535 -38023753 - MIR3 SINE MIR -8 200 3 339 203 38 25 chr10 107565764 107565843 -38023445 - L2 LINE L2 -9 3304 3225 710 299 116 14 chr10 107566411 107566765 -38022523 + L2 LINE L2 2924 3313 0 677 250 23 17 chr10 107566886 107567058 -38022230 + MER5B DNA MER1_type 6 178 0 348 24 0 0 chr10 107567618 107567659 -38021629 + (TCCC)n Simple_repeat Simple_repeat 1 41 0 2464 53 0 13 chr10 107568121 107568420 -38020868 + AluY SINE Alu 1 295 -16 288 53 0 0 chr10 107568634 107568672 -38020616 + (CA)n Simple_repeat Simple_repeat 2 39 0 360 342 58 0 chr10 107568858 107568978 -38020310 + L2 LINE L2 3133 3259 -13 3449 149 23 43 chr10 107569632 107570278 -38019010 + L1MB4 LINE L1 5548 6180 0 448 219 117 8 chr10 107570303 107570431 -38018857 + L1ME4a LINE L1 5556 5697 -424 2351 95 0 16 chr10 107570529 107570845 -38018443 - AluSx SINE Alu -1 311 1 440 267 192 8 chr10 107571181 107571541 -38017747 + L1ME4a LINE L1 5695 6120 -1 212 234 55 102 chr10 107571719 107571847 -38017441 + L2 LINE L2 2991 3112 -160 478 281 88 0 chr10 107571958 107572118 -38017170 - MIR SINE MIR -10 252 79 354 217 0 60 chr10 107572111 107572194 -38017094 + L2 LINE L2 3236 3313 0 * 797 153 32 107 chr10 107572957 107573173 -38016115 - MER20 DNA MER1_type 0 219 20 307 313 104 57 chr10 107573537 107573767 -38015521 + MIR SINE MIR 12 252 -10 520 271 48 48 chr10 107574135 107574245 -38015043 + MIR SINE MIR 35 147 -115 2121 129 3 7 chr10 107574245 107574547 -38014741 + AluSx SINE Alu 1 301 -11 520 271 48 48 chr10 107574547 107574643 -38014645 + MIR SINE MIR 146 241 -21 180 0 0 0 chr10 107575007 107575027 -38014261 + (CAT)n Simple_repeat Simple_repeat 2 21 0 182 330 261 0 chr10 107575032 107575120 -38014168 - L2 LINE L2 -16 3256 3146 181 218 127 0 chr10 107575854 107575909 -38013379 + L3b LINE CR1 1421 1482 -101 7614 49 9 1 chr10 107576589 107577968 -38011320 + L1PA6 LINE L1 4770 6154 0 196 295 77 0 chr10 107577968 107578046 -38011242 + MIR SINE MIR 154 237 -25 23 54 0 0 chr10 107578077 107578114 -38011174 + AT_rich Low_complexity Low_complexity 1 37 0 2190 113 3 10 chr10 107578288 107578599 -38010689 - AluSx SINE Alu -3 309 1 207 0 0 0 chr10 107578931 107578954 -38010334 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4995 189 27 19 chr10 107579881 107580836 -38008452 + MER45B DNA AcHobo 1 963 -77 2171 119 0 0 chr10 107580837 107581132 -38008156 - AluSq SINE Alu -18 295 1 208 235 25 49 chr10 107582415 107582496 -38006792 + L3 LINE CR1 642 720 -857 792 300 135 24 chr10 107582864 107583634 -38005654 + L2 LINE L2 2456 3312 -1 202 237 17 0 chr10 107584884 107584943 -38004345 + (CA)n Simple_repeat Simple_repeat 1 60 0 287 253 63 0 chr10 107585176 107585255 -38004033 + L1MC/D LINE L1 5600 5683 -2125 574 331 84 36 chr10 107585256 107585612 -38003676 + L2 LINE L2 1131 1503 -1811 983 149 58 6 chr10 107586119 107586293 -38002995 - MER5A DNA MER1_type -1 188 6 253 335 32 100 chr10 107586835 107587116 -38002172 - L2 LINE L2 -16 3256 2995 704 145 30 15 chr10 107587634 107587765 -38001523 + MIR SINE MIR 73 205 -57 624 251 119 36 chr10 107588185 107588404 -38000884 + MIR SINE MIR 25 261 -1 246 292 15 0 chr10 107588493 107588558 -38000730 + MIR3 SINE MIR 116 181 -27 355 261 136 0 chr10 107588849 107588937 -38000351 + MIR3 SINE MIR 109 208 0 878 274 69 66 chr10 107590057 107590222 -37999066 + MARNA DNA Mariner 125 288 -298 2340 96 0 7 chr10 107590222 107590523 -37998765 - AluSq SINE Alu -14 299 1 878 274 69 66 chr10 107590523 107590809 -37998479 + MARNA DNA Mariner 288 577 -9 272 296 12 0 chr10 107592544 107592625 -37996663 - L2 LINE L2 -7 3306 3225 500 346 65 15 chr10 107592655 107592915 -37996373 - L2 LINE L2 -407 2907 2635 4436 167 42 53 chr10 107593161 107594125 -37995163 + LTR13 LTR ERVK 1 954 0 842 168 58 29 chr10 107594364 107594537 -37994751 - MER5B DNA MER1_type 0 178 1 2146 93 4 0 chr10 107595058 107595366 -37993922 + AluSx SINE Alu 1 309 0 3048 245 118 7 chr10 107595862 107596148 -37993140 + L1ME3A LINE L1 4891 5144 -1026 1963 98 0 0 chr10 107596148 107596394 -37992894 + AluSc SINE Alu 1 246 -63 3048 245 118 7 chr10 107596394 107597227 -37992061 + L1ME3A LINE L1 5144 6139 -31 635 252 159 12 chr10 107597228 107597486 -37991802 + MER102a DNA MER1_type 35 330 0 1992 142 14 0 chr10 107597512 107597807 -37991481 - AluSx SINE Alu -13 299 1 292 334 78 68 chr10 107598089 107598397 -37990891 - L2 LINE L2 -11 3261 2951 2604 145 61 27 chr10 107599159 107599634 -37989654 + Tigger3b DNA MER2_type 1 491 -740 1002 119 0 0 chr10 107599634 107599777 -37989511 - AluSg/x SINE Alu 0 312 170 4017 149 53 18 chr10 107599777 107600045 -37989243 + Tigger3b DNA MER2_type 484 741 -2288 2167 118 0 10 chr10 107600045 107600373 -37988915 + AluSx SINE Alu 1 312 0 4017 149 53 18 chr10 107600373 107600827 -37988461 + Tigger3b DNA MER2_type 741 1231 -1 2494 63 3 0 chr10 107600914 107601216 -37988072 + AluY SINE Alu 1 303 -8 180 0 0 0 chr10 107601454 107601474 -37987814 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 2981 180 47 9 chr10 107601501 107602072 -37987216 + L1MB8 LINE L1 5586 6178 0 538 301 41 29 chr10 107602075 107602321 -37986967 - L1ME4a LINE L1 -23 6098 5850 380 345 29 29 chr10 107602327 107602501 -37986787 + MIR SINE MIR 17 190 -72 631 252 82 19 chr10 107602693 107602899 -37986389 + MIR SINE MIR 3 221 -41 295 341 114 0 chr10 107603232 107603355 -37985933 - L3b LINE CR1 -85 1498 1362 190 316 63 0 chr10 107603481 107603560 -37985728 - L3b LINE CR1 -248 1335 1252 4605 75 3 2 chr10 107603637 107604211 -37985077 - L1PA8 LINE L1 0 6172 5598 188 313 202 29 chr10 107604248 107604326 -37984962 - MIR SINE MIR -11 251 188 186 43 0 0 chr10 107604326 107604349 -37984939 + (CAT)n Simple_repeat Simple_repeat 2 24 0 188 313 202 29 chr10 107604349 107604478 -37984810 - MIR SINE MIR -74 188 8 324 304 93 50 chr10 107604604 107604765 -37984523 - MIR SINE MIR -59 203 36 344 329 44 48 chr10 107605278 107605527 -37983761 + L3 LINE CR1 1266 1513 -64 310 286 165 15 chr10 107605524 107605657 -37983631 - MER5A DNA MER1_type -21 168 16 * 213 194 0 0 chr10 107606228 107606264 -37983024 + (TG)n Simple_repeat Simple_repeat 2 37 0 473 290 13 19 chr10 107606745 107606900 -37982388 + MIR SINE MIR 78 231 -31 1170 100 18 0 chr10 107607370 107607540 -37981748 + L1MB7 LINE L1 6012 6184 0 2222 95 17 7 chr10 107607546 107607841 -37981447 - AluSq SINE Alu -15 298 1 34 79 0 0 chr10 107607889 107607965 -37981323 + AT_rich Low_complexity Low_complexity 1 76 0 800 174 8 23 chr10 107609709 107609823 -37979465 + FLAM_C SINE Alu 2 115 -187 180 0 0 0 chr10 107609823 107609843 -37979445 + (CTA)n Simple_repeat Simple_repeat 1 20 0 800 174 8 23 chr10 107609843 107609860 -37979428 + FLAM_C SINE Alu 115 131 -171 207 376 30 0 chr10 107610021 107610122 -37979166 - MIR SINE MIR -69 139 36 2417 84 3 6 chr10 107610425 107610736 -37978552 - AluSx SINE Alu -2 310 1 234 346 39 29 chr10 107611374 107611478 -37977810 - L2 LINE L2 -9 3263 3159 379 146 191 11 chr10 107611565 107611654 -37977634 + MIR SINE MIR 81 185 -77 1729 150 16 19 chr10 107612364 107612671 -37976617 - L1MB8 LINE L1 0 6178 5873 208 356 0 0 chr10 107613914 107613973 -37975315 - MIR SINE MIR -82 126 68 920 262 6 6 chr10 107613998 107614217 -37975071 - MIR SINE MIR -4 258 36 1720 186 18 93 chr10 107615642 107616147 -37973141 + MER110A LTR ERV1 2 468 0 298 264 19 38 chr10 107616792 107616898 -37972390 + MER89-int LTR ERV1 610 713 -6088 226 283 0 0 chr10 107617259 107617319 -37971969 + CT-rich Low_complexity Low_complexity 4 63 0 373 360 13 22 chr10 107617415 107617643 -37971645 + MER89-int LTR ERV1 1231 1456 -5345 446 226 29 0 chr10 107617911 107618013 -37971275 + MER110 LTR ERV1 381 485 -6 1209 234 96 66 chr10 107618401 107619112 -37970176 - HAL1 LINE L1 -607 1900 999 252 0 0 0 chr10 107619317 107619329 -37969959 + (TG)n Simple_repeat Simple_repeat 1 40 0 252 0 0 0 chr10 107619329 107619357 -37969931 + (TG)n Simple_repeat Simple_repeat 1 28 0 22 35 0 0 chr10 107619403 107619432 -37969856 + AT_rich Low_complexity Low_complexity 1 29 0 1568 143 139 4 chr10 107619436 107619695 -37969593 - AluSg1 SINE Alu -15 294 1 23 0 0 0 chr10 107619714 107619737 -37969551 + AT_rich Low_complexity Low_complexity 1 23 0 25 31 0 0 chr10 107619969 107620001 -37969287 + AT_rich Low_complexity Low_complexity 1 32 0 3471 198 57 40 chr10 107620102 107620944 -37968344 + MER97a DNA MER1_type? 3 858 -36 288 77 0 0 chr10 107621044 107621083 -37968205 + (TCCC)n Simple_repeat Simple_repeat 4 42 0 821 248 81 24 chr10 107621935 107622181 -37967107 - MIR SINE MIR 0 262 3 639 290 108 69 chr10 107622999 107623334 -37965954 + L2 LINE L2 2924 3271 -1 483 261 48 6 chr10 107623415 107623580 -37965708 - L1ME4a LINE L1 -2 6119 5948 290 264 96 32 chr10 107623625 107623779 -37965509 - MIR SINE MIR -84 178 9 2378 106 0 0 chr10 107623802 107624113 -37965175 - AluY SINE Alu 0 311 1 320 325 71 30 chr10 107626228 107626397 -37962891 + MIR SINE MIR 1 176 -86 * 350 275 79 48 chr10 107626392 107626581 -37962707 + L2 LINE L2 3118 3312 -1 233 270 16 0 chr10 107626585 107626648 -37962640 + GA-rich Low_complexity Low_complexity 2 65 0 832 305 67 1 chr10 107626744 107627090 -37962198 + L2 LINE L2 2685 3053 -260 255 298 157 17 chr10 107627635 107627813 -37961475 + MIR3 SINE MIR 3 205 -3 2474 73 0 0 chr10 107628264 107628565 -37960723 - AluY SINE Alu -10 301 1 184 219 14 14 chr10 107628586 107628659 -37960629 + (TA)n Simple_repeat Simple_repeat 2 74 0 225 0 0 0 chr10 107628675 107628700 -37960588 + (TG)n Simple_repeat Simple_repeat 2 26 0 423 287 0 0 chr10 107629144 107629245 -37960043 - MIR3 SINE MIR -21 187 87 237 336 55 83 chr10 107629898 107630353 -37958935 + L2 LINE L2 2821 3262 -10 22 99 0 0 chr10 107630523 107630594 -37958694 + AT_rich Low_complexity Low_complexity 1 71 0 182 61 0 61 chr10 107630636 107630669 -37958619 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 272 224 41 0 chr10 107631735 107631784 -37957504 - L2 LINE L2 -25 3288 3238 2005 114 29 0 chr10 107632578 107632850 -37956438 - AluSx SINE Alu -32 280 1 281 299 17 81 chr10 107633619 107633793 -37955495 + L2 LINE L2 2899 3061 -211 730 233 57 0 chr10 107633880 107634039 -37955249 + MIR SINE MIR 13 180 -82 216 214 0 0 chr10 107634322 107634364 -37954924 + (TTA)n Simple_repeat Simple_repeat 3 44 0 246 324 35 49 chr10 107635432 107635574 -37953714 - LTR16A1 LTR ERVL -10 447 308 275 219 43 14 chr10 107636054 107636193 -37953095 + L1M2 LINE L1 5742 5884 -294 1953 151 0 56 chr10 107637130 107637487 -37951801 + L1MB7 LINE L1 5832 6168 -16 201 296 88 48 chr10 107637572 107637697 -37951591 + MIR3 SINE MIR 48 177 -31 998 268 149 37 chr10 107638012 107638559 -37950729 - L2 LINE L2 -4 3309 2678 249 217 159 0 chr10 107638672 107638741 -37950547 + MIR SINE MIR 105 184 -78 291 318 80 0 chr10 107638969 107639057 -37950231 + L2 LINE L2 3151 3245 -27 4198 151 44 16 chr10 107639554 107639790 -37949498 - MER6 DNA MER2_type 0 865 637 2405 80 0 13 chr10 107639790 107640101 -37949187 + AluY SINE Alu 1 307 -4 4198 151 44 16 chr10 107640101 107640591 -37948697 - MER6 DNA MER2_type -228 637 119 45056 38 1 3 chr10 107641793 107644887 -37944401 + L1PA3 LINE L1 1 3076 -3079 2679 23 0 10 chr10 107644887 107645196 -37944092 + AluY SINE Alu 1 306 -5 45056 38 1 3 chr10 107645196 107648270 -37941018 + L1PA3 LINE L1 3076 6155 0 210 37 0 0 chr10 107648278 107648305 -37940983 + (CA)n Simple_repeat Simple_repeat 2 28 0 407 317 67 0 chr10 107648460 107648580 -37940708 - L2 LINE L2 -42 3230 3103 2155 137 0 0 chr10 107648786 107649086 -37940202 + AluSx SINE Alu 1 300 -12 475 288 76 44 chr10 107649556 107649806 -37939482 + MIR SINE MIR 5 262 0 1801 138 0 72 chr10 107650741 107650924 -37938364 - AluJo SINE Alu -16 296 144 2378 70 3 23 chr10 107650924 107651225 -37938063 - AluY SINE Alu -16 295 1 1801 138 0 72 chr10 107651225 107651360 -37937928 - AluJo SINE Alu -168 144 1 198 250 159 23 chr10 107651360 107651444 -37937844 + L2 LINE L2 3217 3312 -1 287 325 46 71 chr10 107651809 107652006 -37937282 + MLT1K LTR MaLR 3 194 -394 516 196 8 75 chr10 107652134 107652267 -37937021 + LTR67 LTR ERVL 434 557 0 359 318 11 74 chr10 107652276 107652452 -37936836 + MER5A DNA MER1_type 23 187 -2 597 159 223 25 chr10 107652682 107652745 -37936543 + MIR SINE MIR 63 112 -150 270 0 0 0 chr10 107652745 107652775 -37936513 + (CAT)n Simple_repeat Simple_repeat 2 31 0 597 159 223 25 chr10 107652775 107652868 -37936420 + MIR SINE MIR 112 250 -12 932 157 23 6 chr10 107653078 107653250 -37936038 + MER104 DNA MER2_type 5 179 -1 314 295 172 25 chr10 107655191 107655313 -37933975 + MIR3 SINE MIR 21 160 -48 263 183 0 14 chr10 107656069 107656140 -37933148 + L1ME4a LINE L1 6048 6117 -4 23 0 0 0 chr10 107656511 107656534 -37932754 + AT_rich Low_complexity Low_complexity 1 23 0 1743 245 55 12 chr10 107656818 107657378 -37931910 + L1MB7 LINE L1 4177 4760 -1386 2291 87 0 10 chr10 107657381 107657679 -37931609 + AluY SINE Alu 3 297 -14 2047 143 3 10 chr10 107657830 107658138 -37931150 + AluJb SINE Alu 1 306 -6 751 214 50 15 chr10 107658162 107658363 -37930925 + L1MB7 LINE L1 5818 6025 -159 324 186 68 0 chr10 107658363 107658422 -37930866 - MER8 DNA MER2_type 0 239 177 868 144 8 0 chr10 107658422 107658554 -37930734 + AluSq/x SINE Alu 2 134 -179 1834 120 4 8 chr10 107658556 107658814 -37930474 + AluSc SINE Alu 1 257 -52 968 251 190 15 chr10 107658916 107659388 -37929900 + L1ME LINE L1 5244 5802 -368 1368 132 15 0 chr10 107659394 107659630 -37929658 - AluSg/x SINE Alu 0 314 76 1912 155 40 9 chr10 107659630 107659959 -37929329 - L1MB3 LINE L1 -156 6027 5689 2271 96 3 7 chr10 107661856 107662149 -37927139 + AluSc SINE Alu 1 292 -17 1786 221 78 11 chr10 107662589 107663071 -37926217 - MER110A LTR ERV1 0 468 4 2101 150 21 10 chr10 107663269 107663678 -37925610 + L1MB8 LINE L1 5505 5967 -217 952 221 156 66 chr10 107663688 107663958 -37925330 - MER65B LTR ERV1 -11 520 276 1991 136 82 17 chr10 107663958 107664312 -37924976 - MER51B LTR ERV1 0 377 1 952 221 156 66 chr10 107664312 107664452 -37924836 - MER65B LTR ERV1 -255 276 3 878 158 42 47 chr10 107664499 107664689 -37924599 + L1MB8 LINE L1 5984 6172 -6 3702 199 55 40 chr10 107664941 107665816 -37923472 - MER97a DNA MER1_type -4 890 3 25 31 0 0 chr10 107665917 107665949 -37923339 + AT_rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr10 107666181 107666204 -37923084 + AT_rich Low_complexity Low_complexity 1 23 0 1568 143 139 4 chr10 107666223 107666482 -37922806 + AluSg1 SINE Alu 1 294 -15 22 35 0 0 chr10 107666486 107666515 -37922773 + AT_rich Low_complexity Low_complexity 1 29 0 252 0 0 0 chr10 107666529 107666561 -37922727 + (CA)n Simple_repeat Simple_repeat 1 60 0 252 0 0 0 chr10 107666561 107666589 -37922699 + (CA)n Simple_repeat Simple_repeat 1 28 0 1209 230 106 70 chr10 107666806 107667445 -37921843 + HAL1 LINE L1 999 1660 -847 296 250 0 15 chr10 107667449 107667517 -37921771 + HAL1 LINE L1 1834 1900 -607 446 226 29 0 chr10 107667905 107668007 -37921281 - MER110 LTR ERV1 -6 485 381 370 353 18 23 chr10 107668275 107668496 -37920792 - MER89-int LTR ERV1 -5345 1456 1237 226 283 0 0 chr10 107668599 107668659 -37920629 + GA-rich Low_complexity Low_complexity 4 63 0 1504 186 18 93 chr10 107669771 107670276 -37919012 - MER110A LTR ERV1 0 468 2 930 262 6 6 chr10 107671701 107671920 -37917368 + MIR SINE MIR 36 258 -4 213 356 0 0 chr10 107671945 107672004 -37917284 + MIR SINE MIR 68 126 -82 660 178 23 4 chr10 107673236 107673389 -37915899 + L1MB8 LINE L1 5860 6006 -172 778 311 68 1 chr10 107673391 107673737 -37915551 + L2 LINE L2 2685 3053 -260 255 298 157 17 chr10 107674282 107674460 -37914828 + MIR3 SINE MIR 3 205 -3 2449 73 0 0 chr10 107674911 107675211 -37914077 - AluY SINE Alu -11 300 1 184 219 14 14 chr10 107675232 107675305 -37913983 + (TA)n Simple_repeat Simple_repeat 2 74 0 225 0 0 0 chr10 107675321 107675346 -37913942 + (TG)n Simple_repeat Simple_repeat 2 26 0 432 287 0 0 chr10 107675790 107675891 -37913397 - MIR3 SINE MIR -21 187 87 243 339 55 83 chr10 107676544 107676999 -37912289 + L2 LINE L2 2821 3262 -10 22 99 0 0 chr10 107677169 107677240 -37912048 + AT_rich Low_complexity Low_complexity 1 71 0 182 61 0 61 chr10 107677282 107677315 -37911973 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 273 224 41 0 chr10 107678381 107678430 -37910858 - L2 LINE L2 -25 3288 3238 1998 117 29 0 chr10 107679222 107679496 -37909792 - AluSx SINE Alu -30 282 1 286 305 11 75 chr10 107680265 107680439 -37908849 + L2 LINE L2 2899 3061 -211 739 233 57 0 chr10 107680526 107680685 -37908603 + MIR SINE MIR 13 180 -82 216 214 0 0 chr10 107680968 107681010 -37908278 + (TTA)n Simple_repeat Simple_repeat 3 44 0 242 186 43 14 chr10 107682704 107682774 -37906514 + L1MB7 LINE L1 5746 5817 -495 1790 151 0 56 chr10 107683776 107684133 -37905155 + L1MB7 LINE L1 5832 6168 -16 216 296 88 48 chr10 107684218 107684343 -37904945 + MIR3 SINE MIR 48 177 -31 1039 266 146 42 chr10 107684658 107685209 -37904079 - L2 LINE L2 -4 3309 2678 253 217 159 0 chr10 107685322 107685391 -37903897 + MIR SINE MIR 105 184 -78 299 318 80 0 chr10 107685619 107685707 -37903581 + L2 LINE L2 3151 3245 -27 4357 154 77 17 chr10 107686204 107686440 -37902848 - MER6 DNA MER2_type 0 865 645 2387 86 0 13 chr10 107686440 107686755 -37902533 + AluY SINE Alu 1 311 0 4357 154 77 17 chr10 107686755 107687334 -37901954 - MER6 DNA MER2_type -220 645 1 2395 83 0 3 chr10 107687390 107687692 -37901596 - AluY SINE Alu -10 301 1 1167 167 155 16 chr10 107687826 107688077 -37901211 + AluJo SINE Alu 17 302 -10 875 296 32 0 chr10 107688143 107688363 -37900925 + MIR SINE MIR 17 243 -19 180 277 43 0 chr10 107688754 107688801 -37900487 - L2 LINE L2 -11 3261 3213 195 167 0 0 chr10 107689522 107689564 -37899724 + A-rich Low_complexity Low_complexity 1 42 0 211 312 147 0 chr10 107690234 107690343 -37898945 + L2 LINE L2 2633 2757 -557 2634 55 0 0 chr10 107690803 107691114 -37898174 - AluY SINE Alu 0 311 1 180 372 35 23 chr10 107691178 107691264 -37898024 + L2 LINE L2 3004 3090 -182 218 122 0 20 chr10 107692477 107692526 -37896762 + (TTCA)n Simple_repeat Simple_repeat 1 48 0 342 327 0 20 chr10 107692708 107692809 -37896479 + MIR SINE MIR 6 104 -158 21 36 0 0 chr10 107692811 107692839 -37896449 + AT_rich Low_complexity Low_complexity 1 28 0 470 271 23 0 chr10 107693255 107693384 -37895904 + MER69 DNA AcHobo 1 132 -1094 250 213 66 0 chr10 107693391 107693452 -37895836 + MER69 DNA AcHobo 2452 2516 -10 320 204 0 0 chr10 107693527 107693581 -37895707 - MER8 DNA MER2_type -4 235 182 2358 121 8 94 chr10 107693591 107693803 -37895485 + Tigger2 DNA MER2_type 2281 2431 -287 1724 168 3 55 chr10 107693803 107694131 -37895157 - AluJb SINE Alu -1 311 1 2358 121 8 94 chr10 107694131 107694397 -37894891 + Tigger2 DNA MER2_type 2431 2718 0 245 139 0 0 chr10 107694884 107694920 -37894368 - L2 LINE L2 -16 3256 3221 502 359 11 85 chr10 107695515 107695785 -37893503 + L2 LINE L2 3005 3254 -18 272 157 14 71 chr10 107695785 107695822 -37893466 + GA-rich Low_complexity Low_complexity 3 41 -27 4408 135 36 24 chr10 107695822 107696117 -37893171 + L1MA5 LINE L1 5460 5750 -550 1864 177 3 7 chr10 107696117 107696422 -37892866 + AluJo SINE Alu 1 304 -8 4408 135 36 24 chr10 107696422 107696854 -37892434 + L1MA5 LINE L1 5750 6201 -99 2440 89 0 0 chr10 107696854 107697158 -37892130 - AluSx SINE Alu -8 304 1 4408 135 36 24 chr10 107697158 107697258 -37892030 + L1MA5 LINE L1 6201 6298 -2 272 157 14 71 chr10 107697258 107697290 -37891998 + GA-rich Low_complexity Low_complexity 41 68 0 225 239 0 28 chr10 107698020 107698091 -37891197 + (TAA)n Simple_repeat Simple_repeat 1 69 0 276 241 36 60 chr10 107698148 107698231 -37891057 - MIR SINE MIR -104 158 78 2061 140 7 3 chr10 107698475 107698782 -37890506 + AluSx SINE Alu 1 308 -4 2390 71 0 13 chr10 107698782 107699092 -37890196 + AluY SINE Alu 1 306 -5 707 285 35 0 chr10 107699552 107699752 -37889536 + MLT1G LTR MaLR 1 207 -388 957 251 25 4 chr10 107699758 107700001 -37889287 + MLT1G LTR MaLR 343 590 0 355 272 22 0 chr10 107700527 107700619 -37888669 + L2 LINE L2 3215 3308 -5 354 245 66 38 chr10 107700793 107700899 -37888389 + L2 LINE L2 3164 3272 0 411 354 67 6 chr10 107701440 107701618 -37887670 + MER5A DNA MER1_type 1 189 0 2065 147 0 13 chr10 107701923 107702230 -37887058 + AluSx SINE Alu 1 303 -9 673 254 114 5 chr10 107703773 107703974 -37885314 + MIR SINE MIR 37 259 -3 21 0 0 0 chr10 107704388 107704409 -37884879 + AT_rich Low_complexity Low_complexity 1 21 0 695 274 92 32 chr10 107705125 107705406 -37883882 - L3 LINE CR1 -11 1566 1269 2300 81 13 3 chr10 107706314 107706622 -37882666 + AluY SINE Alu 1 311 0 216 97 0 0 chr10 107706921 107706952 -37882336 + (T)n Simple_repeat Simple_repeat 1 31 0 325 211 25 87 chr10 107707390 107707551 -37881737 - L1ME4a LINE L1 -2 6119 5969 379 126 23 201 chr10 107709026 107709114 -37880174 - MER69 DNA AcHobo 0 2526 2482 1341 151 159 4 chr10 107709114 107709366 -37879922 + AluJo SINE Alu 1 291 -11 379 126 23 201 chr10 107709366 107709451 -37879837 - MER69 DNA AcHobo -44 2482 2384 309 140 53 0 chr10 107709601 107709658 -37879630 - MER69 DNA AcHobo -2459 67 8 190 270 257 33 chr10 107709913 107710065 -37879223 - MIR SINE MIR -11 251 66 305 51 0 0 chr10 107710389 107710428 -37878860 + MER103 DNA DNA 2 40 -126 443 290 59 12 chr10 107710843 107711012 -37878276 + MLT1J2 LTR MaLR 274 450 0 2297 94 7 0 chr10 107712390 107712688 -37876600 - AluSx SINE Alu -12 300 1 250 276 163 31 chr10 107713480 107713578 -37875710 + MIR SINE MIR 21 131 -77 4330 211 124 33 chr10 107713626 107716211 -37873077 - L1MCb LINE L1 -3644 2920 41 2104 129 3 7 chr10 107716701 107717004 -37872284 - AluY SINE Alu -9 302 1 2251 113 0 3 chr10 107717381 107717682 -37871606 - AluSq SINE Alu -13 300 1 1834 148 26 20 chr10 107717953 107718256 -37871032 - AluSx SINE Alu -7 305 1 968 234 60 30 chr10 107718798 107719097 -37870191 - MER58B DNA MER1_type -2 339 32 385 244 253 14 chr10 107719098 107719319 -37869969 - L1M4 LINE L1 -915 5231 4958 259 323 16 0 chr10 107719316 107719443 -37869845 + L1MCa LINE L1 1461 1589 -4837 * 2834 166 24 15 chr10 107719538 107719791 -37869497 - L1MB5 LINE L1 0 6174 5925 1129 204 39 9 chr10 107719791 107720022 -37869266 + MER8 DNA MER2_type 1 238 -1 2834 166 24 15 chr10 107720022 107720317 -37868971 - L1MB5 LINE L1 -249 5925 5621 335 231 135 10 chr10 107720954 107721058 -37868230 - MIR3 SINE MIR -21 187 71 180 308 168 0 chr10 107721470 107721577 -37867711 - MIR SINE MIR -30 232 108 750 250 31 18 chr10 107722177 107722405 -37866883 - L1MC4a LINE L1 -1894 5914 5684 291 298 95 0 chr10 107722414 107722498 -37866790 + MIR SINE MIR 41 132 -76 2170 94 20 3 chr10 107722512 107722810 -37866478 - AluSc SINE Alu -6 303 1 2379 98 14 0 chr10 107722978 107723324 -37865964 + L1PA13 LINE L1 5798 6148 -15 187 57 29 57 chr10 107723380 107723415 -37865873 - MIR3 SINE MIR -49 159 126 483 279 23 23 chr10 107723800 107723929 -37865359 - L2 LINE L2 -1 3271 3143 236 217 174 22 chr10 107723931 107724023 -37865265 - L2 LINE L2 -97 3216 3111 728 342 40 10 chr10 107724036 107724431 -37864857 + L1PA16 LINE L1 16 422 -7159 14223 220 22 8 chr10 107725259 107730519 -37858769 + L1PA16 LINE L1 2261 7604 0 875 241 154 15 chr10 107730520 107730975 -37858313 - L2 LINE L2 -197 3116 2596 1264 168 13 34 chr10 107731000 107731141 -37858147 - MER46A DNA MER2_type -2495 236 100 3885 40 34 2 chr10 107731141 107731616 -37857672 + LTR2B LTR ERV1 1 490 0 1264 168 13 34 chr10 107731616 107731712 -37857576 - MER46A DNA MER2_type -2631 100 4 352 284 29 20 chr10 107731713 107731815 -37857473 - L2 LINE L2 -739 2575 2473 230 353 15 22 chr10 107734400 107734536 -37854752 + MIR SINE MIR 20 154 -108 554 217 184 7 chr10 107734552 107734704 -37854584 - MER5A DNA MER1_type -1 188 10 193 320 0 13 chr10 107734723 107734801 -37854487 + MIR SINE MIR 184 260 -2 1929 116 0 25 chr10 107735258 107735533 -37853755 + AluSx SINE Alu 1 268 -44 295 316 43 0 chr10 107735651 107735768 -37853520 - MIR SINE MIR 0 262 141 411 320 0 0 chr10 107735776 107735898 -37853390 + L2 LINE L2 2921 3042 -271 367 314 86 0 chr10 107735901 107736006 -37853282 - MIR SINE MIR -117 145 32 1237 206 60 30 chr10 107736048 107736165 -37853123 + AluJo SINE Alu 1 113 -199 360 0 0 0 chr10 107736165 107736205 -37853083 + (CA)n Simple_repeat Simple_repeat 2 41 0 1237 206 60 30 chr10 107736205 107736388 -37852900 + AluJo SINE Alu 113 310 -2 1251 167 54 54 chr10 107736399 107736675 -37852613 + AluJo SINE Alu 22 297 -15 488 235 9 9 chr10 107737790 107737905 -37851383 + L2 LINE L2 3199 3313 0 615 313 45 16 chr10 107738102 107738348 -37850940 - MIR SINE MIR -6 256 4 665 197 211 0 chr10 107738992 107739139 -37850149 - MER5A DNA MER1_type -3 186 9 206 282 13 51 chr10 107739186 107739264 -37850024 + MER5A DNA MER1_type 17 91 -98 * 295 219 0 16 chr10 107739211 107739275 -37850013 - MER5B DNA MER1_type -29 149 87 24 32 0 0 chr10 107739373 107739404 -37849884 + AT_rich Low_complexity Low_complexity 1 31 0 810 288 61 50 chr10 107739470 107739866 -37849422 + HAL1 LINE L1 1 400 -2107 2039 220 47 22 chr10 107739869 107740318 -37848970 + Charlie1 DNA MER1_type 1 466 -2295 1399 167 78 32 chr10 107740318 107740599 -37848689 - AluJo SINE Alu -18 294 1 2039 220 47 22 chr10 107740599 107740658 -37848630 + Charlie1 DNA MER1_type 466 522 -2239 6629 193 71 25 chr10 107740661 107741378 -37847910 + Charlie1 DNA MER1_type 1002 1684 -1077 1884 153 0 26 chr10 107741378 107741685 -37847603 - AluJb SINE Alu -10 302 4 6629 193 71 25 chr10 107741685 107742549 -37846739 + Charlie1 DNA MER1_type 1684 2656 -105 2171 192 39 15 chr10 107742546 107742636 -37846652 - MER47B DNA MER2_type -1905 418 332 * 2404 152 34 0 chr10 107742636 107743050 -37846238 + MSTA LTR MaLR 1 428 0 2171 192 39 15 chr10 107743050 107743366 -37845922 - MER47B DNA MER2_type -1991 332 2 504 186 10 0 chr10 107743372 107743469 -37845819 + Charlie1 DNA MER1_type 2663 2760 -1 3442 232 121 79 chr10 107743536 107745400 -37843888 + HAL1 LINE L1 491 2433 -74 2168 212 57 25 chr10 107745902 107746464 -37842824 - L1ME2 LINE L1 -21 6537 5958 2617 237 54 24 chr10 107746504 107747032 -37842256 - L1ME2 LINE L1 -2713 3827 3257 1482 199 0 11 chr10 107747032 107747309 -37841979 - AluJo SINE Alu -18 294 21 2617 237 54 24 chr10 107747309 107747731 -37841557 - L1ME2 LINE L1 -3283 3257 2849 1617 208 25 89 chr10 107747739 107748264 -37841024 - MLT1D LTR MaLR -14 491 1 3668 248 57 33 chr10 107748269 107749089 -37840199 - L1ME2 LINE L1 -3694 2846 2047 2208 120 3 3 chr10 107749089 107749397 -37839891 - AluSx SINE Alu -2 310 3 3668 248 57 33 chr10 107749397 107750314 -37838974 - L1ME2 LINE L1 -4493 2047 1111 551 280 71 111 chr10 107750556 107750881 -37838407 - L1ME2 LINE L1 -5551 979 681 2241 97 3 3 chr10 107750881 107751180 -37838108 + AluY SINE Alu 1 299 -12 551 280 71 111 chr10 107751180 107751375 -37837913 - L1ME2 LINE L1 -5849 681 480 536 269 104 33 chr10 107752310 107752522 -37836766 + MIR SINE MIR 8 234 -28 799 281 84 31 chr10 107752610 107753068 -37836220 - L2 LINE L2 -115 3198 2715 2368 53 0 4 chr10 107753109 107753419 -37835869 + AluY SINE Alu 1 309 0 278 113 0 19 chr10 107755878 107755931 -37833357 + (GGA)n Simple_repeat Simple_repeat 2 53 0 231 36 0 0 chr10 107757064 107757092 -37832196 + (GGGGA)n Simple_repeat Simple_repeat 5 32 0 378 330 46 66 chr10 107757133 107757436 -37831852 - L1ME2 LINE L1 -6210 330 34 8490 181 24 34 chr10 107757532 107759702 -37829586 + L1 LINE L1 2995 5084 -1062 857 214 28 5 chr10 107759707 107759922 -37829366 - L1PA15 LINE L1 -4 6161 5942 15950 218 17 26 chr10 107760023 107762826 -37826462 - L1P4 LINE L1 -536 6280 3536 2112 138 0 0 chr10 107762826 107763130 -37826158 - AluSc SINE Alu -5 304 1 15950 218 17 26 chr10 107763130 107765305 -37823983 - L1P4 LINE L1 -3280 3536 1343 2044 132 14 9 chr10 107765303 107765651 -37823637 - L1MB4 LINE L1 -355 5825 5476 * 2823 143 6 23 chr10 107765651 107766163 -37823125 - L1MA8 LINE L1 -115 6176 5674 309 281 37 92 chr10 107766166 107766330 -37822958 - HAL1b LINE L1 -442 906 752 2368 264 57 21 chr10 107767997 107768847 -37820441 + L2 LINE L2 2239 3124 -189 207 64 43 21 chr10 107768936 107768983 -37820305 + (TA)n Simple_repeat Simple_repeat 1 48 0 2221 105 22 0 chr10 107768994 107769309 -37819979 - MER47A DNA MER2_type 0 366 45 276 221 0 0 chr10 107769341 107769418 -37819870 + (TA)n Simple_repeat Simple_repeat 1 77 0 235 264 11 44 chr10 107769419 107769510 -37819778 + L1MC4 LINE L1 6615 6702 -1340 273 228 0 0 chr10 107769555 107769612 -37819676 + L2 LINE L2 3257 3313 0 2071 115 3 24 chr10 107770573 107770868 -37818420 - AluSq SINE Alu -24 289 1 3180 196 77 58 chr10 107771819 107772890 -37816398 - Charlie6 DNA MER1_type -39 3461 2371 380 264 66 13 chr10 107772887 107773083 -37816205 - Charlie6 DNA MER1_type -3232 268 1 * 2392 91 0 0 chr10 107773654 107773963 -37815325 - AluY SINE Alu -1 310 2 394 280 149 24 chr10 107774124 107774292 -37814996 - Charlie8 DNA MER1_type -2228 189 1 2317 74 3 0 chr10 107774312 107774639 -37814649 - AluSp SINE Alu 0 328 1 631 215 20 7 chr10 107775396 107775545 -37813743 - MER103 DNA DNA -7 159 9 716 189 0 129 chr10 107775547 107775614 -37813674 + MER45A DNA AcHobo 4 78 -1503 2317 98 7 0 chr10 107775614 107775920 -37813368 + AluSg SINE Alu 1 308 -2 716 189 0 129 chr10 107775920 107776053 -37813235 + MER45A DNA AcHobo 78 178 0 387 60 0 0 chr10 107776066 107776116 -37813172 + (TG)n Simple_repeat Simple_repeat 2 51 0 30 69 0 0 chr10 107777768 107777826 -37811462 + AT_rich Low_complexity Low_complexity 1 58 0 1827 184 10 0 chr10 107778413 107778722 -37810566 + AluJo SINE Alu 1 312 0 8089 82 11 4 chr10 107779406 107781312 -37807976 - L1PA7 LINE L1 0 6469 4553 857 147 0 0 chr10 107781308 107781437 -37807851 + L1P3 LINE L1 149 277 -6184 * 1104 79 0 0 chr10 107781442 107781581 -37807707 - L1PA7 LINE L1 -6317 144 6 23 33 0 0 chr10 107782263 107782293 -37806995 + AT_rich Low_complexity Low_complexity 1 30 0 1029 186 8 64 chr10 107782502 107782738 -37806550 - THE1A LTR MaLR -6 349 127 8067 35 8 2 chr10 107782839 107783886 -37805402 - L1P LINE L1 -2769 3377 2325 * 9208 27 7 0 chr10 107783877 107785148 -37804140 + L1P1 LINE L1 4286 5561 -594 212 364 99 0 chr10 107785250 107785371 -37803917 + MIR SINE MIR 124 256 -6 189 316 10 61 chr10 107785393 107785485 -37803803 + MIR SINE MIR 86 172 -90 505 294 11 37 chr10 107785485 107785672 -37803616 - MER5A DNA MER1_type -1 188 7 557 152 48 0 chr10 107785997 107786102 -37803186 - ORSL DNA AcHobo -165 110 1 527 207 131 7 chr10 107786516 107786661 -37802627 - L2 LINE L2 -1 3312 3150 660 340 15 33 chr10 107786763 107787092 -37802196 - L2 LINE L2 -386 2928 2606 549 211 106 0 chr10 107787245 107787387 -37801901 - MER103 DNA DNA -7 159 3 282 293 43 43 chr10 107787560 107787724 -37801564 - HAL1b LINE L1 -442 906 743 4252 179 45 16 chr10 107787877 107788938 -37800350 - L1MB8 LINE L1 -10 6168 5077 374 340 47 39 chr10 107788951 107789207 -37800081 - HAL1 LINE L1 -1414 1093 836 7265 109 13 38 chr10 107789208 107790025 -37799263 - Tigger1 DNA MER2_type 0 2418 1637 723 41 0 31 chr10 107790025 107790151 -37799137 + L1PA2 LINE L1 6056 6155 0 7265 109 13 38 chr10 107790151 107790495 -37798793 - Tigger1 DNA MER2_type -781 1637 1286 3180 146 117 0 chr10 107790596 107791143 -37798145 - Tigger1 DNA MER2_type -1778 640 30 272 357 23 31 chr10 107791537 107791666 -37797622 - L2 LINE L2 -12 3260 3133 3428 110 26 9 chr10 107791699 107792245 -37797043 + L1MA4 LINE L1 5621 6175 -125 341 286 187 18 chr10 107792487 107792658 -37796630 - L2 LINE L2 -4 3309 3110 243 88 0 0 chr10 107792984 107793018 -37796270 + (A)n Simple_repeat Simple_repeat 1 34 0 2079 118 0 0 chr10 107793023 107793303 -37795985 + AluSx SINE Alu 23 302 -10 808 308 49 21 chr10 107793670 107794196 -37795092 + L1ME4a LINE L1 5404 5944 -177 24 32 0 0 chr10 107794605 107794636 -37794652 + AT_rich Low_complexity Low_complexity 1 31 0 234 0 0 0 chr10 107794841 107794867 -37794421 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 1712 210 88 23 chr10 107795392 107795826 -37793462 + MLT1C LTR MaLR 6 467 0 7307 53 4 0 chr10 107796135 107797067 -37792221 - L1P LINE L1 -1881 4265 3330 7642 223 41 36 chr10 107797175 107798226 -37791062 - L1MB8 LINE L1 -1430 4716 3672 1990 120 25 4 chr10 107798226 107798530 -37790758 - AluSx SINE Alu 0 310 1 7642 223 41 36 chr10 107798530 107799894 -37789394 - L1MB8 LINE L1 -2474 3672 2287 2150 112 0 0 chr10 107799896 107800198 -37789090 - AluY SINE Alu 0 308 7 2549 206 57 17 chr10 107800433 107801166 -37788122 + L1M4 LINE L1 4668 5424 -743 1669 180 3 7 chr10 107801260 107801544 -37787744 - AluJo SINE Alu -29 283 1 182 296 111 0 chr10 107801660 107801741 -37787547 + MIR SINE MIR 48 137 -71 3628 157 27 10 chr10 107801963 107802656 -37786632 - L1MB8 LINE L1 0 6178 5474 24612 36 2 0 chr10 107802914 107806719 -37782569 - L1PA10 LINE L1 0 6168 2360 3633 229 5 38 chr10 107806719 107807742 -37781546 - L1P3 LINE L1 -4306 2155 1167 1755 248 10 2 chr10 107807723 107808122 -37781166 - L1P3 LINE L1 -5271 604 203 * 320 315 197 5 chr10 107808248 107808461 -37780827 - MIR SINE MIR -7 255 2 238 256 218 31 chr10 107808891 107809101 -37780187 - L2 LINE L2 -255 3017 2766 186 349 0 60 chr10 107809121 107809204 -37780084 + L2 LINE L2 3187 3264 -8 327 307 178 21 chr10 107809955 107810242 -37779046 + L1M4 LINE L1 4490 4821 -1325 2401 84 0 0 chr10 107810427 107810725 -37778563 + AluY SINE Alu 1 298 -13 23 54 0 0 chr10 107810734 107810771 -37778517 + AT_rich Low_complexity Low_complexity 1 37 0 207 162 0 0 chr10 107812369 107812406 -37776882 + CT-rich Low_complexity Low_complexity 1 37 0 469 208 239 0 chr10 107812785 107812915 -37776373 - MIR SINE MIR -87 175 15 251 349 124 6 chr10 107812917 107813086 -37776202 - MER117 DNA MER1_type 0 197 9 227 227 0 0 chr10 107813613 107813657 -37775631 - LTR66 LTR ERVL -242 368 325 362 349 166 0 chr10 107813665 107813834 -37775454 + MIR SINE MIR 60 256 -6 14690 112 27 5 chr10 107814078 107816383 -37772905 - L1P LINE L1 -1751 4395 2040 1948 93 0 19 chr10 107816509 107816766 -37772522 - AluSg SINE Alu -58 252 1 2060 227 90 123 chr10 107816772 107817430 -37771858 - L1MDb LINE L1 -3114 3292 2614 183 42 0 0 chr10 107817430 107817454 -37771834 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2023 85 0 44 chr10 107817459 107817752 -37771536 - AluSx SINE Alu -32 280 1 2060 227 90 123 chr10 107817752 107819686 -37769602 - L1MDb LINE L1 -3796 2610 811 204 231 0 0 chr10 107820265 107820317 -37768971 + GA-rich Low_complexity Low_complexity 2 53 0 360 0 0 0 chr10 107820422 107820462 -37768826 + (CA)n Simple_repeat Simple_repeat 1 40 0 184 205 26 0 chr10 107820554 107820593 -37768695 + MER5C DNA MER1_type 31 70 -254 2394 63 7 7 chr10 107821818 107822119 -37767169 - AluSc SINE Alu -8 301 1 365 140 0 0 chr10 107822151 107822208 -37767080 - L1MC1 LINE L1 -224 6109 6053 2619 168 29 2 chr10 107822569 107823050 -37766238 - L1MC1 LINE L1 -23 6310 5817 232 134 41 41 chr10 107823388 107823485 -37765803 + (TA)n Simple_repeat Simple_repeat 1 97 0 278 223 46 34 chr10 107823495 107823670 -37765618 + (TATATG)n Simple_repeat Simple_repeat 4 180 0 * 406 203 34 23 chr10 107823574 107823751 -37765537 + (TA)n Simple_repeat Simple_repeat 1 179 0 275 228 37 37 chr10 107823699 107823861 -37765427 + (CATATA)n Simple_repeat Simple_repeat 1 162 0 * 190 300 0 20 chr10 107824479 107824529 -37764759 + L2 LINE L2 3213 3261 -11 186 301 60 12 chr10 107824582 107824665 -37764623 + MIR SINE MIR 49 135 -73 1927 126 18 0 chr10 107824693 107824997 -37764291 + AluSx SINE Alu 1 309 0 359 226 34 17 chr10 107825372 107825549 -37763739 + (TA)n Simple_repeat Simple_repeat 1 180 0 190 300 0 20 chr10 107826166 107826216 -37763072 + L2 LINE L2 3213 3261 -11 186 301 60 12 chr10 107826269 107826352 -37762936 + MIR SINE MIR 49 135 -73 1904 129 18 0 chr10 107826380 107826684 -37762604 + AluSx SINE Alu 1 309 0 221 281 34 45 chr10 107827320 107827409 -37761879 - L2 LINE L2 -29 3284 3197 243 170 0 0 chr10 107827931 107827978 -37761310 + (TG)n Simple_repeat Simple_repeat 2 48 0 1268 301 91 12 chr10 107827978 107828397 -37760891 + LTR16B LTR ERVL 8 459 -5 2658 310 77 28 chr10 107828594 107830284 -37759004 + HERV16 LTR ERVL 208 2094 -3661 563 223 54 36 chr10 107831140 107831306 -37757982 + L1ME LINE L1 5558 5726 -395 1385 184 51 37 chr10 107831397 107831691 -37757597 + AluJo SINE Alu 1 298 -14 529 343 118 23 chr10 107833252 107833692 -37755596 + L2 LINE L2 2147 2628 -686 2057 113 0 47 chr10 107833763 107834092 -37755196 + AluSq SINE Alu 1 315 0 1064 284 43 35 chr10 107834107 107834624 -37754664 + L1MC4 LINE L1 7447 7967 -75 266 210 136 25 chr10 107834997 107835078 -37754210 - MIR SINE MIR -57 205 116 3031 181 52 38 chr10 107835610 107836303 -37752985 + MER54A LTR ERVL 6 901 0 393 227 25 59 chr10 107836321 107836440 -37752848 + MIR3 SINE MIR 91 205 -3 226 360 108 0 chr10 107837307 107837418 -37751870 - L2 LINE L2 0 3272 3150 210 250 0 0 chr10 107838397 107838437 -37750851 + L2 LINE L2 3009 3048 -265 725 230 219 34 chr10 107838472 107838824 -37750464 + MLT1J2 LTR MaLR 34 450 0 192 40 0 0 chr10 107838900 107838925 -37750363 + (T)n Simple_repeat Simple_repeat 1 25 0 1228 282 75 34 chr10 107839146 107839771 -37749517 + L1ME4a LINE L1 5313 5963 -158 25 95 0 0 chr10 107839805 107839879 -37749409 + AT_rich Low_complexity Low_complexity 1 74 0 1310 225 14 51 chr10 107839939 107840352 -37748936 + L1M4 LINE L1 4457 4854 -1292 198 91 0 0 chr10 107840517 107840550 -37748738 + (T)n Simple_repeat Simple_repeat 1 33 0 43041 32 21 1 chr10 107840554 107846586 -37742702 - L1HS LINE L1 -2 6153 1 756 256 46 27 chr10 107846587 107846806 -37742482 + L2 LINE L2 3091 3313 0 1038 304 48 15 chr10 107847053 107847389 -37741899 - LTR16A LTR ERVL -103 347 1 749 181 32 27 chr10 107847415 107847603 -37741685 + MER53 DNA DNA 1 189 0 1185 160 19 5 chr10 107847764 107847970 -37741318 - L1MA7 LINE L1 -456 5835 5627 * 2053 134 42 72 chr10 107847960 107848416 -37740872 + L1MA7 LINE L1 5850 6291 0 737 305 62 69 chr10 107851061 107851586 -37737702 - L2 LINE L2 0 3313 2804 1108 217 131 30 chr10 107851690 107851858 -37737430 - L1MC4 LINE L1 -220 7822 7672 2029 136 0 13 chr10 107851858 107852159 -37737129 - AluSx SINE Alu -15 297 1 1108 217 131 30 chr10 107852159 107852386 -37736902 - L1MC4 LINE L1 -370 7672 7387 198 0 0 0 chr10 107852579 107852601 -37736687 + (GGGGA)n Simple_repeat Simple_repeat 2 23 0 669 110 0 0 chr10 107852605 107852705 -37736583 + (GGAA)n Simple_repeat Simple_repeat 1 100 0 20552 158 29 45 chr10 107852705 107855176 -37734112 + L1MA3 LINE L1 12 2523 -5201 2451 80 0 3 chr10 107855176 107855488 -37733800 + AluY SINE Alu 1 311 0 20552 158 29 45 chr10 107855488 107857700 -37731588 + L1MA3 LINE L1 2523 4771 -2953 1790 169 3 3 chr10 107857700 107857990 -37731298 + AluJo SINE Alu 1 290 -22 20552 158 29 45 chr10 107857990 107859932 -37729356 + L1MA3 LINE L1 4771 6744 -980 9640 22 0 0 chr10 107859932 107861836 -37727452 - L1PA3 LINE L1 -1 6154 4254 20552 158 29 45 chr10 107861836 107862796 -37726492 + L1MA3 LINE L1 6744 7464 -260 895 63 94 0 chr10 107862796 107862923 -37726365 - MER85 DNA T2_type 0 139 1 20552 158 29 45 chr10 107862923 107863179 -37726109 + L1MA3 LINE L1 7464 7723 -1 26 30 0 0 chr10 107863275 107863308 -37725980 + AT_rich Low_complexity Low_complexity 1 33 0 296 304 135 7 chr10 107863673 107863821 -37725467 - L3 LINE CR1 -436 1141 975 359 257 46 28 chr10 107863835 107863944 -37725344 - MIR3 SINE MIR -15 193 83 475 218 56 9 chr10 107864055 107864203 -37725085 + MIR SINE MIR 21 190 -72 2376 71 0 10 chr10 107864476 107864771 -37724517 + AluSg SINE Alu 1 292 -18 464 120 76 0 chr10 107864839 107864931 -37724357 - L1MB3 LINE L1 -1 6182 6084 233 263 281 0 chr10 107865053 107865167 -37724121 + MIR SINE MIR 111 256 -6 199 279 135 61 chr10 107865701 107865930 -37723358 + L2 LINE L2 2220 2465 -849 426 139 139 37 chr10 107866846 107866954 -37722334 + L1MC5 LINE L1 7794 7912 -49 201 154 0 0 chr10 107867121 107867160 -37722128 + (TATATG)n Simple_repeat Simple_repeat 2 40 0 730 161 21 7 chr10 107867880 107868023 -37721265 - MER69 DNA AcHobo 0 2526 2382 280 277 0 48 chr10 107868124 107868207 -37721081 - MER69 DNA AcHobo -1140 86 8 250 311 0 0 chr10 107868208 107868269 -37721019 + L2 LINE L2 3223 3283 -30 1261 136 16 70 chr10 107868269 107868511 -37720777 + MER30 DNA MER1_type 1 229 -1 525 328 199 19 chr10 107868659 107869071 -37720217 + L2 LINE L2 2827 3312 -1 258 253 42 63 chr10 107869189 107869284 -37720004 - MIR SINE MIR 0 262 170 1079 261 55 10 chr10 107869291 107869693 -37719595 - L1M4 LINE L1 -1495 4651 4232 226 267 22 33 chr10 107869980 107870123 -37719165 - MER5A DNA MER1_type 0 189 2 543 146 153 15 chr10 107870148 107870285 -37719003 - Charlie5 DNA MER1_type -27 2585 2430 390 174 0 14 chr10 107870283 107870352 -37718936 - Charlie5 DNA MER1_type -2542 70 3 * 188 349 24 36 chr10 107870443 107870526 -37718762 - MER5A DNA MER1_type -40 149 68 494 318 104 10 chr10 107871546 107871738 -37717550 - MIR SINE MIR -44 218 9 408 261 61 22 chr10 107871787 107871967 -37717321 - L1M4 LINE L1 -1713 4433 4247 251 296 14 0 chr10 107872510 107872581 -37716707 + L1ME LINE L1 137 208 -5997 1431 152 27 50 chr10 107872604 107872901 -37716387 + AluJo SINE Alu 1 290 -22 575 256 8 0 chr10 107873344 107873465 -37715823 + MLT2E LTR ERVL 1 122 -506 2794 33 0 3 chr10 107873465 107873800 -37715488 + L1PA4 LINE L1 5819 6152 -3 197 98 24 0 chr10 107873857 107873898 -37715390 + (TTTTTG)n Simple_repeat Simple_repeat 2 43 0 28 0 0 0 chr10 107874477 107874505 -37714783 + AT_rich Low_complexity Low_complexity 1 28 0 1259 208 13 0 chr10 107875537 107875773 -37713515 + MER8 DNA MER2_type 1 239 0 1849 176 24 21 chr10 107875844 107876180 -37713108 - MER1B DNA MER1_type 0 337 1 432 345 49 32 chr10 107877454 107877860 -37711428 + MER89-int LTR ERV1 172 584 -4063 293 274 51 8 chr10 107878522 107878639 -37710649 + MER89-int LTR ERV1 3387 3508 -3293 1629 159 80 15 chr10 107878792 107879118 -37710170 - MER7A DNA MER2_type 0 346 2 609 267 39 14 chr10 107880117 107880398 -37708890 + L1ME LINE L1 2173 2460 -3936 1895 200 66 60 chr10 107880416 107880918 -37708370 + MLT1D LTR MaLR 1 624 0 1887 149 3 23 chr10 107880947 107881248 -37708040 + AluJo SINE Alu 3 297 -15 855 256 157 10 chr10 107881249 107881741 -37707547 + L1ME LINE L1 2451 3014 -3201 * 930 201 21 73 chr10 107881740 107882028 -37707260 + L1ME3A LINE L1 5894 6166 -4 183 345 48 24 chr10 107882145 107882229 -37707059 + MIR3 SINE MIR 120 205 -3 393 358 41 0 chr10 107882556 107882679 -37706609 - L2 LINE L2 -1 3271 3144 276 274 83 12 chr10 107883016 107883100 -37706188 + L2 LINE L2 2966 3055 -258 910 255 228 40 chr10 107883248 107883648 -37705640 + MLT1L LTR MaLR 130 604 -11 718 233 122 6 chr10 107883677 107883857 -37705431 + L2 LINE L2 3113 3313 0 929 280 86 82 chr10 107884061 107884474 -37704814 + MLT1G1 LTR MaLR 73 483 -112 1726 180 0 10 chr10 107884474 107884769 -37704519 + AluJo SINE Alu 1 292 -20 929 280 86 82 chr10 107884769 107884819 -37704469 + MLT1G1 LTR MaLR 483 531 -64 2299 88 0 3 chr10 107884819 107885115 -37704173 - AluY SINE Alu -16 295 1 929 280 86 82 chr10 107885115 107885171 -37704117 + MLT1G1 LTR MaLR 531 595 0 1963 158 50 62 chr10 107885405 107885822 -37703466 + MLT2D LTR ERVL 1 412 -2 313 327 93 13 chr10 107885867 107886058 -37703230 - MIR SINE MIR -56 206 3 4655 137 48 34 chr10 107886105 107886857 -37702431 + L1MB3 LINE L1 5280 6048 -135 2099 110 24 0 chr10 107886857 107887148 -37702140 + AluSg SINE Alu 1 298 -12 4655 137 48 34 chr10 107887148 107887284 -37702004 + L1MB3 LINE L1 6048 6181 -2 22 56 0 0 chr10 107887443 107887479 -37701809 + AT_rich Low_complexity Low_complexity 1 36 0 1044 112 0 31 chr10 107887479 107887640 -37701648 - L1PA8A LINE L1 -9 6122 5967 378 91 0 0 chr10 107887685 107887740 -37701548 + (TTCA)n Simple_repeat Simple_repeat 1 55 0 351 279 147 5 chr10 107887752 107887956 -37701332 - L2 LINE L2 -6 3307 3075 521 277 27 21 chr10 107889244 107889432 -37699856 - MER5A DNA MER1_type 0 189 1 654 238 42 30 chr10 107891099 107891267 -37698021 - MIR SINE MIR -2 260 91 434 278 83 17 chr10 107891267 107891447 -37697841 + MLT1J1 LTR MaLR 1 192 -254 555 245 7 7 chr10 107891621 107891760 -37697528 - MER104 DNA Tc2 -15 165 27 1106 202 45 76 chr10 107891785 107892181 -37697107 + L1MC5 LINE L1 6856 7239 -722 257 237 203 0 chr10 107892247 107892306 -37696982 + Charlie1 DNA MER1_type 1 71 -2690 * 1838 158 30 58 chr10 107892304 107892735 -37696553 + Charlie1 DNA MER1_type 2343 2761 0 668 221 55 51 chr10 107892735 107892970 -37696318 + L1MC5 LINE L1 7291 7526 -435 255 272 97 18 chr10 107893094 107893208 -37696080 + L1ME3 LINE L1 5988 6110 -52 1075 177 62 14 chr10 107893454 107893891 -37695397 + LTR54B LTR ERV1 1 490 -8 946 230 42 75 chr10 107894155 107894369 -37694919 - MLT2C1 LTR ERVL -73 324 122 2087 104 0 21 chr10 107894369 107894689 -37694599 + AluSg SINE Alu 1 314 0 946 230 42 75 chr10 107894689 107894808 -37694480 - MLT2C1 LTR ERVL -275 122 1 2490 54 0 0 chr10 107895203 107895501 -37693787 + AluY SINE Alu 1 298 -13 656 294 35 15 chr10 107895784 107895985 -37693303 + MIR SINE MIR 29 233 -29 260 207 69 0 chr10 107896057 107896115 -37693173 - AluJb SINE Alu -155 147 86 1306 163 4 35 chr10 107896115 107896342 -37692946 - AluJo SINE Alu -92 220 1 271 344 179 0 chr10 107897577 107897728 -37691560 - MIR3 SINE MIR -36 172 26 615 329 50 27 chr10 107897958 107898359 -37690929 - L2 LINE L2 -568 2746 2337 225 302 38 28 chr10 107898353 107898459 -37690829 + L3 LINE CR1 1167 1273 -304 * 1632 145 69 7 chr10 107898604 107898880 -37690408 + AluSx SINE Alu 1 293 -19 2324 71 7 7 chr10 107899419 107899714 -37689574 - AluSc SINE Alu -14 295 1 365 140 0 0 chr10 107899746 107899803 -37689485 - L1MC1 LINE L1 -224 6109 6053 2658 164 29 2 chr10 107900164 107900645 -37688643 - L1MC1 LINE L1 -23 6310 5817 2022 80 10 27 chr10 107900646 107900947 -37688341 - L1PA13 LINE L1 -4 6159 5864 665 181 31 0 chr10 107901686 107901813 -37687475 + MIR3 SINE MIR 67 197 -11 236 345 0 0 chr10 107902235 107902290 -37686998 + MIR SINE MIR 70 124 -84 313 316 32 44 chr10 107902301 107902459 -37686829 - MIR SINE MIR 0 262 107 604 231 80 76 chr10 107903064 107903315 -37685973 - MARNA DNA Mariner -329 257 6 216 152 0 43 chr10 107904248 107904294 -37684994 + (CAAA)n Simple_repeat Simple_repeat 1 44 0 781 212 0 0 chr10 107904349 107904481 -37684807 - FLAM_A SINE Alu -1 132 1 636 294 156 5 chr10 107904890 107905108 -37684180 - MIR SINE MIR 0 262 12 308 298 8 50 chr10 107905174 107905295 -37683993 + MER117 DNA MER1_type 82 197 0 2228 112 0 7 chr10 107905746 107906049 -37683239 + AluSx SINE Alu 1 301 -11 187 338 150 8 chr10 107906513 107906646 -37682642 - L2 LINE L2 -5 3267 3116 310 263 13 0 chr10 107906690 107906766 -37682522 - MIR SINE MIR -110 152 76 2271 79 7 0 chr10 107907363 107907654 -37681634 - AluSx SINE Alu -19 293 1 2577 49 0 3 chr10 107908065 107908369 -37680919 + AluY SINE Alu 1 303 -8 184 205 26 0 chr10 107909593 107909632 -37679656 - MER5C DNA MER1_type -254 70 31 486 49 0 0 chr10 107909724 107909785 -37679503 + (TG)n Simple_repeat Simple_repeat 2 62 0 1654 136 31 88 chr10 107909787 107910008 -37679280 + MER39 LTR ERV1 24 256 -451 511 217 75 0 chr10 107910008 107910114 -37679174 - FLAM_A SINE Alu -19 114 1 1654 136 31 88 chr10 107910114 107910314 -37678974 + MER39 LTR ERV1 256 523 -184 256 174 43 14 chr10 107910319 107910388 -37678900 + MER21B LTR ERV1 793 863 0 266 305 11 11 chr10 107911061 107911156 -37678132 + CT-rich Low_complexity Low_complexity 1 95 0 311 283 26 35 chr10 107911363 107911476 -37677812 + MIR SINE MIR 57 168 -94 208 278 187 66 chr10 107912155 107912396 -37676892 - L2 LINE L2 -7 3306 3037 2376 267 115 78 chr10 107912543 107913957 -37675331 + L1MCc LINE L1 17 1483 -4940 445 237 68 68 chr10 107913973 107914247 -37675041 + L1MCc LINE L1 1873 2149 -4792 560 111 121 0 chr10 107914247 107914346 -37674942 + L1MB3 LINE L1 6062 6172 -11 445 237 68 68 chr10 107914346 107914392 -37674896 + L1MCc LINE L1 2148 2193 -4748 190 174 0 65 chr10 107914671 107914717 -37674571 - L3 LINE CR1 -5 1572 1530 403 252 72 0 chr10 107915648 107915759 -37673529 - MIR SINE MIR -60 202 84 972 191 0 0 chr10 107916532 107916700 -37672588 - FRAM SINE Alu -4 172 5 736 202 37 64 chr10 107916735 107916923 -37672365 + MER58B DNA MER1_type 152 334 -7 2575 190 45 54 chr10 107916925 107917427 -37671861 + MLT2B3 LTR ERVL 1 499 -55 1963 132 40 3 chr10 107917427 107917753 -37671535 + MER44D DNA MER2_type 1 608 -1 2575 190 45 54 chr10 107917753 107917809 -37671479 + MLT2B3 LTR ERVL 499 554 0 184 238 0 0 chr10 107918003 107918045 -37671243 + L2 LINE L2 2933 2974 -298 767 225 122 24 chr10 107918090 107918303 -37670985 - MIR SINE MIR -17 245 12 189 298 194 24 chr10 107919969 107920093 -37669195 + MIR SINE MIR 32 176 -86 1485 190 10 24 chr10 107920380 107920675 -37668613 - AluJo SINE Alu -21 291 1 205 162 0 0 chr10 107920966 107921003 -37668285 + (TG)n Simple_repeat Simple_repeat 1 37 0 865 173 40 89 chr10 107921836 107922084 -37667204 - MER106A DNA MER1_type 0 236 1 251 219 229 21 chr10 107922094 107922190 -37667098 - MIR SINE MIR -55 207 92 4263 258 75 22 chr10 107922930 107924580 -37664708 + L1MEc LINE L1 35 1803 -4593 544 312 16 11 chr10 107924603 107924792 -37664496 + L1MEc LINE L1 141 330 -6066 6862 92 15 22 chr10 107924828 107925389 -37663899 + L1MA2 LINE L1 5216 5774 -530 2075 117 13 7 chr10 107925389 107925738 -37663550 + AluSx SINE Alu 1 351 0 6862 92 15 22 chr10 107925738 107926266 -37663022 + L1MA2 LINE L1 5774 6304 0 677 241 78 66 chr10 107926298 107926948 -37662340 - L1M4 LINE L1 -3091 3055 2398 450 306 35 56 chr10 107926955 107927239 -37662049 + MARNA DNA Mariner 43 320 -266 277 323 0 43 chr10 107927341 107927434 -37661854 + MIR SINE MIR 42 130 -78 270 284 172 0 chr10 107928243 107928359 -37660929 + MIR SINE MIR 48 183 -79 1799 155 60 81 chr10 107928364 107928783 -37660505 + MSTB LTR MaLR 1 410 -16 31 26 0 0 chr10 107929098 107929136 -37660152 + AT_rich Low_complexity Low_complexity 1 38 0 28 0 0 0 chr10 107929180 107929208 -37660080 + AT_rich Low_complexity Low_complexity 1 28 0 180 305 125 0 chr10 107929253 107929381 -37659907 - L2 LINE L2 -239 3033 2890 305 259 37 12 chr10 107930414 107930495 -37658793 + L2 LINE L2 3185 3267 -5 411 228 16 71 chr10 107930710 107930837 -37658451 - MER113 DNA MER1_type? -3 518 399 6156 76 19 5 chr10 107930862 107931991 -37657297 - L1PA8A LINE L1 -19 6112 4983 4796 107 7 0 chr10 107931991 107932674 -37656614 - L1PA8A LINE L1 -1758 4388 3701 4339 119 3 1 chr10 107932671 107933353 -37655935 + L1PA8A LINE L1 3019 3701 -2445 * 416 232 69 57 chr10 107933431 107933519 -37655769 - MER113 DNA MER1_type? -242 279 194 428 287 78 25 chr10 107933519 107933763 -37655525 + MIR SINE MIR 3 259 -3 416 232 69 57 chr10 107933763 107933920 -37655368 - MER113 DNA MER1_type? -327 194 31 330 182 15 30 chr10 107934050 107934116 -37655172 + L2 LINE L2 3208 3272 0 23 33 0 0 chr10 107934897 107934927 -37654361 + AT_rich Low_complexity Low_complexity 1 30 0 597 305 79 0 chr10 107935021 107935224 -37654064 + MIR SINE MIR 40 258 -4 294 263 61 26 chr10 107935432 107935546 -37653742 - L2 LINE L2 -5 3308 3191 546 278 120 5 chr10 107935652 107935843 -37653445 + L1MEc LINE L1 37 249 -6147 292 224 17 0 chr10 107935893 107935951 -37653337 - L2 LINE L2 -210 3062 3004 405 260 68 41 chr10 107935956 107936102 -37653186 - L2 LINE L2 -2 3311 3162 1028 325 114 28 chr10 107936110 107936827 -37652461 - L2 LINE L2 -337 2977 2199 365 57 0 19 chr10 107937453 107937506 -37651782 + (TG)n Simple_repeat Simple_repeat 2 53 0 187 308 90 0 chr10 107938085 107938163 -37651125 + MIR SINE MIR 52 136 -126 362 312 256 14 chr10 107938934 107939364 -37649924 + L3 LINE CR1 643 1176 -401 239 278 41 31 chr10 107939473 107939570 -37649718 + MLT1I LTR MaLR 21 118 -291 283 256 120 26 chr10 107939824 107939941 -37649347 + MLT1H LTR MaLR 409 536 -13 254 247 173 0 chr10 107939966 107940047 -37649241 - MLT1I LTR MaLR -34 375 281 * 362 301 77 48 chr10 107940036 107940345 -37648943 - MLT1I LTR MaLR -180 369 50 398 328 56 20 chr10 107940408 107940603 -37648685 - MIR SINE MIR -51 211 10 502 332 127 62 chr10 107940617 107941003 -37648285 + L3 LINE CR1 1166 1576 -1 1794 166 10 7 chr10 107941135 107941437 -37647851 + AluJo SINE Alu 1 303 -9 11391 134 24 46 chr10 107941437 107943488 -37645800 + Tigger1 DNA MER2_type 412 2417 -1 181 354 0 0 chr10 107944237 107944302 -37644986 - L2 LINE L2 0 3313 3249 254 96 19 19 chr10 107945499 107945551 -37643737 + L1PA3 LINE L1 6104 6155 0 857 88 31 56 chr10 107945560 107945720 -37643568 + L1MA1 LINE L1 6048 6203 -99 354 23 0 0 chr10 107945744 107945787 -37643501 + (CA)n Simple_repeat Simple_repeat 2 44 0 400 256 238 6 chr10 107946099 107946259 -37643029 + MIR SINE MIR 49 245 -17 695 200 0 8 chr10 107946521 107946646 -37642642 + FLAM_C SINE Alu 1 124 -9 1382 146 68 84 chr10 107946812 107947120 -37642168 - AluJo SINE Alu -9 303 1 214 305 143 19 chr10 107947292 107947397 -37641891 + MIR3 SINE MIR 87 204 -4 404 256 120 43 chr10 107947811 107948112 -37641176 + L1ME4a LINE L1 5617 5940 -181 202 204 37 19 chr10 107948230 107948284 -37641004 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 24 0 0 0 chr10 107949052 107949076 -37640212 + AT_rich Low_complexity Low_complexity 1 24 0 1464 209 0 24 chr10 107949079 107949366 -37639922 - AluJo SINE Alu -30 282 3 1863 146 0 4 chr10 107949402 107949683 -37639605 - AluJb SINE Alu -32 280 1 232 301 0 48 chr10 107950045 107950128 -37639160 - L2 LINE L2 -5 3308 3230 405 286 9 9 chr10 107950545 107950650 -37638638 - MIR SINE MIR -20 242 138 2239 113 3 3 chr10 107950671 107950980 -37638308 - AluSp SINE Alu -4 309 1 1649 269 77 71 chr10 107951169 107952683 -37636605 + L1MEd LINE L1 7 1622 -868 4060 35 0 0 chr10 107953231 107953711 -37635577 + L1PA3 LINE L1 5676 6155 0 262 328 25 0 chr10 107953967 107954089 -37635199 + ERVL LTR ERVL 1085 1209 -4555 1248 261 99 7 chr10 107954093 107954640 -37634648 + L1MC3 LINE L1 2957 3553 -2576 2195 97 3 3 chr10 107954641 107954952 -37634336 + L1PB2 LINE L1 5838 6148 -3 3030 187 63 24 chr10 107954960 107956398 -37632890 + L1MC3 LINE L1 4626 5386 -743 864 226 62 3 chr10 107956394 107956682 -37632606 + L1ME1 LINE L1 4775 5079 -1067 * 825 264 15 10 chr10 107956682 107956883 -37632405 - MER58A DNA MER1_type -8 216 15 3255 191 33 34 chr10 107956911 107957372 -37631916 + L1ME1 LINE L1 5127 5585 -581 1569 95 20 63 chr10 107957372 107957624 -37631664 - AluSg/x SINE Alu 0 312 72 3255 191 33 34 chr10 107957624 107958083 -37631205 + L1ME1 LINE L1 5585 6043 -123 346 165 44 22 chr10 107958165 107958256 -37631032 + L1MA10 LINE L1 6241 6333 -1 2834 232 48 9 chr10 107958296 107958989 -37630299 + L1ME1 LINE L1 5457 6333 -1 526 311 136 0 chr10 107959035 107959292 -37629996 - L3 LINE CR1 -48 1529 1238 700 302 60 17 chr10 107959295 107959530 -37629758 + MIR SINE MIR 1 245 -17 339 292 125 7 chr10 107960107 107960251 -37629037 + MIR3 SINE MIR 37 197 -11 2722 179 33 5 chr10 107960488 107961057 -37628231 + L1MB8 LINE L1 5587 6171 -7 479 340 26 7 chr10 107961299 107961452 -37627836 - L2 LINE L2 0 3272 3117 373 268 73 8 chr10 107961550 107961673 -37627615 + MIR SINE MIR 73 203 -59 2066 29 0 0 chr10 107962774 107963019 -37626269 - L1PA2 LINE L1 -2 6153 5909 21 0 0 0 chr10 107963284 107963305 -37625983 + AT_rich Low_complexity Low_complexity 1 21 0 1453 229 117 27 chr10 107963515 107963916 -37625372 + LTR16A LTR ERVL 12 448 -2 2227 109 0 0 chr10 107964236 107964530 -37624758 + AluSc SINE Alu 1 294 -15 511 243 90 14 chr10 107964600 107964744 -37624544 - MIR SINE MIR -18 244 90 700 212 0 15 chr10 107964967 107965099 -37624189 + FLAM_A SINE Alu 1 130 -3 528 320 61 22 chr10 107965237 107965468 -37623820 + MIR SINE MIR 9 248 -14 420 221 212 0 chr10 107965725 107965838 -37623450 - MIR SINE MIR -26 236 100 2440 88 3 0 chr10 107966014 107966322 -37622966 + AluSp SINE Alu 1 309 -4 264 304 38 0 chr10 107966365 107966444 -37622844 + L1ME4a LINE L1 5955 6036 -85 631 264 123 56 chr10 107966475 107966850 -37622438 + MLT1J2 LTR MaLR 31 430 -20 2281 93 3 13 chr10 107966961 107967273 -37622015 + AluSg SINE Alu 1 309 -1 377 282 64 30 chr10 107967291 107967493 -37621795 + L1ME3A LINE L1 5610 5818 -303 320 240 209 0 chr10 107968017 107968146 -37621142 + L1ME3A LINE L1 6007 6162 -8 255 384 107 38 chr10 107968854 107969247 -37620041 - L2 LINE L2 -42 3230 2811 430 282 149 11 chr10 107969472 107969666 -37619622 + MIR SINE MIR 37 255 -7 4614 96 36 7 chr10 107969996 107970697 -37618591 + L1MA2 LINE L1 5584 6304 0 2435 109 5 35 chr10 107971648 107972023 -37617265 + THE1B LTR MaLR 1 364 0 235 65 0 43 chr10 107972274 107972320 -37616968 + L1MA5 LINE L1 6257 6300 0 244 267 153 23 chr10 107972556 107972687 -37616601 + L1ME4a LINE L1 5882 6029 -92 2322 103 0 0 chr10 107972758 107973059 -37616229 - AluY SINE Alu -10 301 1 284 279 221 0 chr10 107975147 107975269 -37614019 + MIR SINE MIR 102 250 -12 185 176 0 39 chr10 107975334 107975385 -37613903 + (TGAA)n Simple_repeat Simple_repeat 4 52 0 5234 20 0 0 chr10 107975857 107976453 -37612835 + L1PA3 LINE L1 5558 6153 -2 334 308 0 0 chr10 107976541 107976619 -37612669 - L2 LINE L2 -9 3263 3186 410 365 103 29 chr10 107976882 107977222 -37612066 - L2 LINE L2 -436 2878 2514 1415 245 12 90 chr10 107977572 107978074 -37611214 + LTR16B LTR ERVL 2 464 0 214 203 14 29 chr10 107978183 107978252 -37611036 - L3b LINE CR1 -165 1418 1351 666 296 11 26 chr10 107978610 107978874 -37610414 + MIR SINE MIR 2 261 -1 906 161 66 58 chr10 107979590 107979864 -37609424 - MER33 DNA MER1_type -2 322 47 845 158 71 15 chr10 107979968 107980164 -37609124 - MER33 DNA MER1_type -115 209 3 522 324 31 35 chr10 107980221 107980511 -37608777 + LTR67 LTR ERVL 1 289 -268 10037 124 83 29 chr10 107980615 107982448 -37606840 - L1M1 LINE L1 -4263 3302 1370 3167 208 9 41 chr10 107982446 107983202 -37606086 - L1M1 LINE L1 -6820 745 14 * 2223 263 69 11 chr10 107983198 107983940 -37605348 - L1MDa LINE L1 -5514 1026 19 * 3735 37 10 0 chr10 107984700 107985182 -37604106 - L1P LINE L1 -3215 2931 2445 7806 9 5 1 chr10 107985182 107986899 -37602389 + L1PA3 LINE L1 4465 6155 0 1210 232 12 48 chr10 107987069 107987482 -37601806 - L1M4 LINE L1 -1292 4854 4457 4727 227 29 21 chr10 107987933 107988116 -37601172 + L1PA12 LINE L1 2396 2576 -5008 2278 76 0 24 chr10 107988116 107988405 -37600883 + AluY SINE Alu 1 282 -29 207 0 0 0 chr10 107988408 107988431 -37600857 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4727 227 29 21 chr10 107988431 107990452 -37598836 + L1PA12 LINE L1 2577 4630 -2954 5006 145 82 2 chr10 107990636 107991910 -37597378 - L1MA8 LINE L1 -1 7250 5869 4553 262 36 62 chr10 107991904 107992172 -37597116 - L1MA8 LINE L1 -3790 3316 3043 * 243 0 0 0 chr10 107992172 107992199 -37597089 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 4553 262 36 62 chr10 107992199 107995668 -37593620 - L1MA8 LINE L1 -4063 3043 1 23 0 0 0 chr10 107995682 107995705 -37593583 + AT_rich Low_complexity Low_complexity 1 23 0 322 343 79 17 chr10 107995819 107995997 -37593291 - MIR3 SINE MIR -18 190 2 3098 104 4 2 chr10 107996882 107997352 -37591936 - L1P LINE L1 -5511 635 165 4357 85 2 2 chr10 107997355 107997957 -37591331 + Charlie3 DNA MER1_type 2105 2706 -4 205 278 19 0 chr10 107997957 107998011 -37591277 + L2 LINE L2 3213 3267 -5 247 277 190 29 chr10 107999512 107999649 -37589639 - MIR SINE MIR -55 207 49 2420 161 11 16 chr10 108000246 108000682 -37588606 + MER57B LTR ERV1 1 434 0 223 317 106 19 chr10 108000814 108000918 -37588370 - MIR SINE MIR -58 150 38 744 200 74 0 chr10 108001287 108001462 -37587826 + MER82 DNA MER2_type 17 204 -449 1769 174 0 78 chr10 108001766 108002151 -37587137 + MER82 DNA MER2_type 201 555 -98 439 268 57 19 chr10 108002736 108002893 -37586395 + MIR SINE MIR 6 168 -94 27 49 0 0 chr10 108002964 108003005 -37586283 + AT_rich Low_complexity Low_complexity 1 41 0 28 29 0 0 chr10 108003058 108003093 -37586195 + AT_rich Low_complexity Low_complexity 1 35 0 1096 221 86 38 chr10 108003703 108004116 -37585172 - MLT1C LTR MaLR -7 460 25 744 249 207 32 chr10 108004373 108004590 -37584698 + MIR SINE MIR 8 262 0 20056 43 5 3 chr10 108005990 108008618 -37580670 - L1P LINE L1 -2992 3154 522 263 239 30 0 chr10 108009074 108009141 -37580147 + MER113 DNA MER1_type? 296 364 -157 417 178 47 89 chr10 108009141 108009310 -37579978 + L1ME4a LINE L1 5960 6121 0 3912 17 0 0 chr10 108009635 108010105 -37579183 - L1P1 LINE L1 -1682 4464 3995 * 7518 25 0 0 chr10 108010104 108011254 -37578034 + L1P1 LINE L1 4460 5609 -546 201 326 197 23 chr10 108011584 108011716 -37577572 - L2 LINE L2 -182 3090 2936 263 387 21 0 chr10 108012470 108012563 -37576725 + MIR SINE MIR 2 96 -166 310 398 25 0 chr10 108012614 108012732 -37576556 - L1M2 LINE L1 -6064 785 665 228 385 34 0 chr10 108012871 108012988 -37576300 - L1M2 LINE L1 -6069 780 660 902 295 43 3 chr10 108013376 108013678 -37575610 - L1M2 LINE L1 -6524 325 12 317 247 151 41 chr10 108013691 108013837 -37575451 + MIR SINE MIR 101 262 0 21 0 0 0 chr10 108013963 108013984 -37575304 + AT_rich Low_complexity Low_complexity 1 21 0 513 212 27 86 chr10 108014050 108014343 -37574945 + L1ME2 LINE L1 5162 5443 -719 * 579 196 45 0 chr10 108014340 108014473 -37574815 + L1MD3 LINE L1 7728 7866 -129 * 730 208 82 55 chr10 108014465 108014720 -37574568 + L1MD3 LINE L1 7724 7985 -10 * 2553 199 50 50 chr10 108014715 108015457 -37573831 + L1ME2 LINE L1 5423 6164 0 2244 105 0 16 chr10 108015535 108015841 -37573447 - AluSg SINE Alu -9 301 1 408 40 0 0 chr10 108017582 108017632 -37571656 + (TG)n Simple_repeat Simple_repeat 2 51 0 358 254 138 38 chr10 108017751 108017974 -37571314 - MIR SINE MIR -6 256 4 231 405 82 13 chr10 108018556 108018936 -37570352 - L2 LINE L2 -784 2530 2125 329 329 63 9 chr10 108018963 108019185 -37570103 - L2 LINE L2 -1335 1979 1746 35 24 0 0 chr10 108019241 108019283 -37570005 + AT_rich Low_complexity Low_complexity 1 42 0 3448 141 75 12 chr10 108019510 108020193 -37569095 - Tigger3b DNA MER2_type -505 726 1 2417 201 14 44 chr10 108020193 108020298 -37568990 + L1MD3 LINE L1 6660 6767 -1228 1428 208 16 31 chr10 108020298 108020615 -37568673 + AluJo SINE Alu 1 312 0 2417 201 14 44 chr10 108020615 108021146 -37568142 + L1MD3 LINE L1 6767 7277 -718 439 202 0 85 chr10 108021147 108021276 -37568012 + MLT1F1 LTR MaLR 1 118 -449 966 228 0 0 chr10 108021281 108021505 -37567783 + L1MD3 LINE L1 7403 7626 -369 7265 157 13 6 chr10 108021613 108022986 -37566302 - L1P LINE L1 -1297 4849 3467 255 218 18 18 chr10 108023103 108023158 -37566130 - L2 LINE L2 -9 3263 3209 397 263 11 0 chr10 108023457 108023552 -37565736 + MIR3 SINE MIR 99 194 -14 2208 121 0 7 chr10 108024981 108025286 -37564002 - AluSx SINE Alu -9 303 1 212 320 89 12 chr10 108025414 108025591 -37563697 - L2 LINE L2 -9 3304 3113 13065 129 21 9 chr10 108025700 108027860 -37561428 + Tigger2 DNA MER2_type 534 2718 0 291 157 0 0 chr10 108027993 108028044 -37561244 + (CA)n Simple_repeat Simple_repeat 2 52 0 516 276 57 66 chr10 108028112 108028478 -37560810 + MLT1K LTR MaLR 226 588 0 187 281 0 35 chr10 108028483 108028540 -37560748 - MIR SINE MIR -108 154 100 424 228 58 116 chr10 108028894 108029153 -37560135 - MLT1E LTR MaLR -349 244 1 213 162 0 0 chr10 108029221 108029258 -37560030 + L2 LINE L2 3235 3271 -1 590 330 54 21 chr10 108030138 108030377 -37558911 - MIR SINE MIR -2 260 14 613 293 49 10 chr10 108030500 108030705 -37558583 - MLT1L LTR MaLR -84 531 319 17695 156 24 36 chr10 108030705 108030796 -37558492 + L1MA1 LINE L1 79 170 -7395 1406 30 0 0 chr10 108030796 108030963 -37558325 - L1PA5 LINE L1 0 6154 5988 17695 156 24 36 chr10 108030963 108034154 -37555134 + L1MA1 LINE L1 170 3321 -4244 4408 77 1 40 chr10 108034154 108034801 -37554487 + L1PA14 LINE L1 5540 6161 0 17695 156 24 36 chr10 108034801 108035004 -37554284 + L1MA1 LINE L1 3321 3525 -4040 8178 147 22 10 chr10 108035111 108036700 -37552588 + L1MA1 LINE L1 5114 6754 -967 7911 66 4 6 chr10 108036700 108037709 -37551579 - LTR13 LTR ERVK 0 1007 1 8178 147 22 10 chr10 108037709 108038689 -37550599 + L1MA1 LINE L1 6754 7721 0 651 268 74 21 chr10 108041241 108041484 -37547804 - MIR SINE MIR 0 262 7 408 20 0 0 chr10 108041747 108041796 -37547492 + (TG)n Simple_repeat Simple_repeat 2 50 0 1626 190 39 36 chr10 108042031 108042415 -37546873 - MLT1B LTR MaLR 0 390 6 3540 210 93 16 chr10 108042519 108043452 -37545836 + L1MD2 LINE L1 5343 6347 -12 235 90 90 15 chr10 108044125 108044192 -37545096 + (TA)n Simple_repeat Simple_repeat 2 73 0 5428 109 22 5 chr10 108044814 108045624 -37543664 + Charlie3 DNA MER1_type 118 941 -1769 7838 23 0 0 chr10 108045627 108047316 -37541972 - L1PA4 LINE L1 -2 6153 4465 1594 62 0 4 chr10 108047316 108047542 -37541746 + L1P LINE L1 2445 2669 -3477 290 94 0 16 chr10 108048081 108048318 -37540970 + AluSg SINE Alu 1 306 0 2001 138 23 3 chr10 108048334 108048638 -37540650 - AluSx SINE Alu -2 310 1 329 305 60 13 chr10 108050357 108050590 -37538698 + L1ME LINE L1 5255 5498 -668 299 310 85 12 chr10 108050736 108050970 -37538318 + L1M2 LINE L1 5521 5776 -386 2458 72 0 3 chr10 108051119 108051450 -37537838 - L1P LINE L1 -5810 336 7 2237 124 0 0 chr10 108051545 108051852 -37537436 - AluSg SINE Alu -3 307 1 372 238 0 12 chr10 108051867 108051951 -37537337 - MER58B DNA MER1_type -36 305 223 28120 114 13 16 chr10 108051951 108054518 -37534770 + L1PA4 LINE L1 149 2722 -3748 2430 87 0 3 chr10 108054518 108054827 -37534461 + AluY SINE Alu 2 309 -2 28120 114 13 16 chr10 108054827 108058574 -37530714 + L1PA4 LINE L1 2722 6470 0 446 216 37 8 chr10 108058591 108058725 -37530563 - L1P LINE L1 -796 5350 5213 2479 113 15 2 chr10 108058827 108059233 -37530055 - L1P4 LINE L1 -475 5691 5281 8370 210 21 8 chr10 108059986 108062044 -37527244 - L1P4 LINE L1 -863 5283 3212 268 346 46 50 chr10 108062413 108062541 -37526747 - L1MEc LINE L1 -6015 381 254 2140 117 9 29 chr10 108062541 108062857 -37526431 + AluSx SINE Alu 1 310 -2 268 346 46 50 chr10 108062857 108063031 -37526257 - L1MEc LINE L1 -6142 254 80 2128 271 52 37 chr10 108063072 108063435 -37525853 - L1ME LINE L1 -4174 2087 1731 368 111 37 0 chr10 108063435 108063516 -37525772 - L1MB2 LINE L1 -3 6168 6085 2128 271 52 37 chr10 108063516 108064658 -37524630 - L1ME LINE L1 -4530 1731 521 358 197 0 0 chr10 108065245 108065306 -37523982 - Tigger1 DNA MER2_type 0 2418 2358 1216 82 0 60 chr10 108065306 108065488 -37523800 - AluY SINE Alu -42 269 99 2882 175 93 30 chr10 108065541 108065601 -37523687 - L1MA7 LINE L1 -11 6280 6225 186 43 0 0 chr10 108065601 108065624 -37523664 + (CA)n Simple_repeat Simple_repeat 1 23 0 2882 175 93 30 chr10 108065624 108066263 -37523025 - L1MA7 LINE L1 -66 6225 5398 1740 185 10 20 chr10 108066263 108066560 -37522728 - AluJo SINE Alu -18 294 1 2882 175 93 30 chr10 108066560 108066835 -37522453 - L1MA7 LINE L1 -893 5398 5142 778 274 33 18 chr10 108066858 108067248 -37522040 - L1M4c LINE L1 -4703 1681 1286 385 177 22 22 chr10 108067357 108067534 -37521754 - L1PA16 LINE L1 -2 6164 5953 5387 86 3 10 chr10 108067635 108068168 -37521120 - L1PA10 LINE L1 -156 6012 5488 2340 95 0 22 chr10 108068168 108068484 -37520804 - AluSc SINE Alu 0 309 1 5387 86 3 10 chr10 108068484 108068925 -37520363 - L1PA10 LINE L1 -680 5488 5045 2538 205 5 25 chr10 108068924 108069529 -37519759 + L1MB1 LINE L1 4529 5121 -1025 * 3950 162 11 21 chr10 108069536 108069758 -37519530 + L1MB1 LINE L1 5388 5611 -557 2309 103 0 10 chr10 108069758 108070069 -37519219 + AluSq SINE Alu 1 308 -5 3950 162 11 21 chr10 108070069 108070635 -37518653 + L1MB1 LINE L1 5611 6168 0 1094 181 38 19 chr10 108070677 108071050 -37518238 - L1ME LINE L1 -690 5476 5098 24 53 0 0 chr10 108071577 108071615 -37517673 + AT_rich Low_complexity Low_complexity 1 38 0 1994 213 35 40 chr10 108071997 108072500 -37516788 - L1ME LINE L1 -2489 3657 3153 1943 141 87 0 chr10 108072500 108072834 -37516454 + THE1B LTR MaLR 2 364 0 10810 103 38 3 chr10 108072834 108074360 -37514928 + THE1B-int LTR MaLR 1 1579 -1 2027 140 83 0 chr10 108074367 108074703 -37514585 + THE1B LTR MaLR 1 364 0 1994 213 35 40 chr10 108074703 108074867 -37514421 - L1ME LINE L1 -2998 3148 2984 197 404 61 35 chr10 108075368 108075596 -37513692 + L2 LINE L2 2963 3196 -76 21 36 0 0 chr10 108075636 108075664 -37513624 + AT_rich Low_complexity Low_complexity 1 28 0 180 0 0 0 chr10 108076504 108076524 -37512764 + (TA)n Simple_repeat Simple_repeat 2 21 0 21 0 0 0 chr10 108076896 108076917 -37512371 + AT_rich Low_complexity Low_complexity 1 21 0 2289 107 3 0 chr10 108077010 108077318 -37511970 - AluSx SINE Alu -3 309 1 252 313 18 0 chr10 108077331 108077443 -37511845 + (TA)n Simple_repeat Simple_repeat 1 114 0 480 294 117 19 chr10 108077468 108077777 -37511511 - L1ME LINE L1 -467 5697 5359 1299 79 20 30 chr10 108078045 108078248 -37511040 + L1PA10 LINE L1 5967 6167 -1 9448 224 48 36 chr10 108078251 108081066 -37508222 - L1 LINE L1 -1597 4373 1491 1732 195 0 0 chr10 108081066 108081358 -37507930 - AluSx SINE Alu -20 292 1 9448 224 48 36 chr10 108081358 108082230 -37507058 - L1 LINE L1 -4479 1491 631 252 122 0 0 chr10 108082235 108082276 -37507012 + (TG)n Simple_repeat Simple_repeat 2 42 0 212 260 27 0 chr10 108082284 108082357 -37506931 + (CATATA)n Simple_repeat Simple_repeat 1 75 0 228 135 0 0 chr10 108082371 108082408 -37506880 + (TG)n Simple_repeat Simple_repeat 2 38 0 1660 290 26 37 chr10 108082428 108082483 -37506805 - L1M3de LINE L1 -4883 1770 1716 2356 156 36 14 chr10 108082483 108082900 -37506388 + MSTB LTR MaLR 1 426 0 1660 290 26 37 chr10 108082900 108082955 -37506333 - L1M3de LINE L1 -4937 1716 1662 1633 139 18 123 chr10 108082955 108083337 -37505951 + MER2 DNA MER2_type 1 342 -2 1660 290 26 37 chr10 108083337 108083767 -37505521 - L1M3de LINE L1 -4991 1662 1235 1608 295 33 18 chr10 108083779 108084865 -37504423 - L1 LINE L1 -5197 694 11 1126 67 0 0 chr10 108085630 108085764 -37503524 - AluSg SINE Alu -176 134 1 1204 181 82 0 chr10 108085764 108085996 -37503292 + MER45B DNA AcHobo 570 820 -220 401 246 94 47 chr10 108086038 108086209 -37503079 + MIR SINE MIR 68 246 -16 369 0 0 0 chr10 108086252 108086293 -37502995 + (ATG)n Simple_repeat Simple_repeat 3 43 0 2428 73 0 0 chr10 108086303 108086606 -37502682 - AluY SINE Alu -8 303 1 377 339 9 0 chr10 108087378 108087487 -37501801 + L2 LINE L2 3184 3293 -20 635 316 210 8 chr10 108087793 108088189 -37501099 + L3b LINE CR1 1102 1577 -6 234 0 0 0 chr10 108088729 108088755 -37500533 + (T)n Simple_repeat Simple_repeat 1 26 0 334 226 147 10 chr10 108089977 108090079 -37499209 - MIR3 SINE MIR -5 203 88 2856 7 0 0 chr10 108091105 108091414 -37497874 - AluYa5 SINE Alu -2 309 1 559 311 29 16 chr10 108092729 108092973 -37496315 + L2 LINE L2 2820 3066 -247 6356 141 25 4 chr10 108092973 108094979 -37494309 - L1PB1 LINE L1 0 6151 4106 346 267 261 11 chr10 108094988 108095164 -37494124 + L2 LINE L2 3093 3312 -1 227 230 40 30 chr10 108095259 108095359 -37493929 + (TAAA)n Simple_repeat Simple_repeat 2 102 0 258 208 0 56 chr10 108095597 108095669 -37493619 - MER5A DNA MER1_type -88 101 34 246 331 35 0 chr10 108096126 108096211 -37493077 - MIR SINE MIR -104 104 13 528 213 100 0 chr10 108096830 108096980 -37492308 - MER103 DNA DNA 0 166 2 2014 118 10 7 chr10 108097711 108098000 -37491288 + AluSg SINE Alu 1 290 -20 25 31 0 0 chr10 108098126 108098158 -37491130 + AT_rich Low_complexity Low_complexity 1 32 0 972 242 46 52 chr10 108098198 108098545 -37490743 - MLT1A1 LTR MaLR 0 365 21 390 261 35 56 chr10 108099893 108100035 -37489253 + MIR SINE MIR 77 215 -47 245 324 41 17 chr10 108100809 108100974 -37488314 - MIR SINE MIR 0 262 2 31 0 0 0 chr10 108101413 108101444 -37487844 + AT_rich Low_complexity Low_complexity 1 31 0 1855 118 24 10 chr10 108101444 108101741 -37487547 - L1MA3 LINE L1 -270 6035 5735 701 163 39 0 chr10 108101734 108101745 -37487543 - L1M1 LINE L1 -7422 143 134 * 2338 104 3 0 chr10 108101745 108102053 -37487235 - AluSp SINE Alu -4 309 1 701 163 39 0 chr10 108102053 108102170 -37487118 - L1M1 LINE L1 -7431 134 10 21 82 0 0 chr10 108102446 108102495 -37486793 + AT_rich Low_complexity Low_complexity 1 49 0 21 0 0 0 chr10 108102826 108102847 -37486441 + AT_rich Low_complexity Low_complexity 1 21 0 1919 155 48 0 chr10 108103232 108103541 -37485747 + MER58B DNA MER1_type 1 324 -17 1258 217 117 13 chr10 108105168 108105560 -37483728 - L1ME2 LINE L1 -6 6227 5795 834 248 53 21 chr10 108105556 108105838 -37483450 - L1ME2 LINE L1 -968 5247 4957 * 2941 227 57 21 chr10 108105861 108106792 -37482496 - L1ME2 LINE L1 -2438 3777 2814 586 273 64 98 chr10 108106800 108107370 -37481918 - L1ME2 LINE L1 -5029 1188 794 2152 121 0 10 chr10 108107370 108107677 -37481611 + AluSg SINE Alu 1 304 -6 586 273 64 98 chr10 108107677 108107807 -37481481 - L1ME2 LINE L1 -5423 794 661 235 143 0 0 chr10 108107935 108107970 -37481318 - MLT1A1 LTR MaLR -361 35 1 239 273 70 39 chr10 108108204 108108332 -37480956 - L1M4 LINE L1 -3140 3006 2875 234 0 0 0 chr10 108108683 108108709 -37480579 + (TA)n Simple_repeat Simple_repeat 2 27 0 2166 132 3 0 chr10 108108710 108109021 -37480267 - AluSx SINE Alu 0 312 1 1903 152 10 16 chr10 108109070 108109380 -37479908 + AluJo SINE Alu 1 308 -4 2423 136 84 15 chr10 108109551 108110028 -37479260 - L1MB8 LINE L1 0 6178 5669 410 249 147 4 chr10 108110176 108110421 -37478867 - L1ME4a LINE L1 -65 6056 5777 544 259 116 0 chr10 108110504 108110651 -37478637 - MIR SINE MIR -13 249 86 23 33 0 0 chr10 108111550 108111580 -37477708 + AT_rich Low_complexity Low_complexity 1 30 0 429 342 27 11 chr10 108111870 108112057 -37477231 - MIR SINE MIR -41 221 32 1026 230 99 28 chr10 108112272 108112594 -37476694 - MER2 DNA MER2_type 0 345 1 6093 60 2 0 chr10 108113181 108119239 -37470049 + L1PA5 LINE L1 11 6154 0 3584 203 29 38 chr10 108119437 108120492 -37468796 - L1M3 LINE L1 -715 5465 4423 909 183 76 62 chr10 108120490 108120779 -37468509 - L1M3 LINE L1 -2130 4016 3724 * 213 65 0 0 chr10 108120779 108120810 -37468478 + (TAA)n Simple_repeat Simple_repeat 1 31 0 504 285 119 5 chr10 108120816 108121009 -37468279 - MIR SINE MIR -12 250 36 2095 143 0 0 chr10 108121034 108121335 -37467953 - AluSx SINE Alu -11 301 1 224 280 86 21 chr10 108123003 108123096 -37466192 + L2 LINE L2 2973 3071 -201 204 318 178 19 chr10 108123362 108123522 -37465766 + MIR3 SINE MIR 5 195 -13 1429 191 2 117 chr10 108125007 108125461 -37463827 - L1 LINE L1 -1075 5071 4670 464 218 27 0 chr10 108125461 108125581 -37463707 + MER69 DNA AcHobo 2395 2526 0 413 299 60 100 chr10 108125972 108126223 -37463065 + L2 LINE L2 3028 3268 -4 200 263 284 11 chr10 108126239 108126334 -37462954 - MIR3 SINE MIR -51 157 37 2295 73 25 0 chr10 108126410 108126568 -37462720 - AluY SINE Alu -18 293 123 456 35 0 0 chr10 108126568 108126626 -37462662 + (TTTTG)n Simple_repeat Simple_repeat 2 59 0 2295 73 25 0 chr10 108126626 108126753 -37462535 - AluY SINE Alu -188 123 1 453 314 179 9 chr10 108127307 108127530 -37461758 - MIR SINE MIR 0 262 2 295 238 59 43 chr10 108127559 108127815 -37461473 - Charlie7 DNA MER1_type -2 2610 2351 523 269 45 29 chr10 108127826 108127925 -37461363 - Charlie7 DNA MER1_type -1947 665 569 343 155 12 36 chr10 108127925 108128009 -37461279 - L1PB4 LINE L1 -1 6155 6074 523 269 45 29 chr10 108128009 108128246 -37461042 - Charlie7 DNA MER1_type -2043 569 270 2536 58 0 6 chr10 108129343 108129656 -37459632 - AluY SINE Alu 0 311 1 827 194 0 0 chr10 108129658 108129797 -37459491 - FLAM_C SINE Alu -4 139 1 196 247 59 47 chr10 108130750 108130835 -37458453 + L2 LINE L2 3017 3102 -211 203 186 23 0 chr10 108131200 108131243 -37458045 + GA-rich Low_complexity Low_complexity 3 46 0 215 169 0 78 chr10 108131381 108131458 -37457830 + (TAAA)n Simple_repeat Simple_repeat 1 71 0 10575 155 16 62 chr10 108131465 108132443 -37456845 + L1PA13 LINE L1 3057 4078 -2090 2431 93 0 0 chr10 108132443 108132743 -37456545 + AluY SINE Alu 1 300 -11 10575 155 16 62 chr10 108132743 108132936 -37456352 + L1PA13 LINE L1 4078 4278 -1890 1963 148 26 0 chr10 108132936 108133240 -37456048 + AluSx SINE Alu 1 312 0 10575 155 16 62 chr10 108133240 108134597 -37454691 + L1PA13 LINE L1 4278 5452 -716 336 129 0 0 chr10 108134617 108134679 -37454609 - L1M1 LINE L1 -783 5520 5459 2234 112 7 0 chr10 108134679 108134973 -37454315 - AluSq SINE Alu -17 296 1 4535 106 24 0 chr10 108134984 108135661 -37453627 + L1PA13 LINE L1 5468 6160 -3 500 316 61 36 chr10 108135731 108135978 -37453310 + L1ME LINE L1 5355 5607 -514 207 108 0 27 chr10 108137450 108137487 -37451801 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 3315 132 10 0 chr10 108137492 108138013 -37451275 - L1PB3 LINE L1 -10 6144 5619 30005 107 11 58 chr10 108138042 108144475 -37444813 - L1PA7 LINE L1 -21 6133 12 2203 80 41 55 chr10 108144576 108144647 -37444641 - L1PB1 LINE L1 -3 6148 6078 1054 96 12 6 chr10 108144647 108144813 -37444475 + (TTTC)n Simple_repeat Simple_repeat 2 168 0 2071 131 0 0 chr10 108144814 108145096 -37444192 - AluSq SINE Alu -31 282 1 2203 80 41 55 chr10 108145096 108145385 -37443903 - L1PB1 LINE L1 -72 6079 5791 237 132 0 0 chr10 108145406 108145444 -37443844 + (TA)n Simple_repeat Simple_repeat 1 38 0 1520 100 4 0 chr10 108145445 108145674 -37443614 - L1PB1 LINE L1 -363 5788 5559 15879 189 42 43 chr10 108145675 108145886 -37443402 - L1PBa LINE L1 -2097 4765 4555 4369 50 7 4 chr10 108145886 108146442 -37442846 + LTR6B LTR ERV1 1 558 0 15879 189 42 43 chr10 108146442 108148237 -37441051 - L1PBa LINE L1 -2307 4555 2759 4437 97 3 5 chr10 108148237 108148859 -37440429 - L1PA10 LINE L1 -6 6162 5542 15879 189 42 43 chr10 108148859 108151644 -37437644 - L1PBa LINE L1 -4103 2759 1 182 186 23 70 chr10 108152006 108152049 -37437239 - L2 LINE L2 -4 3268 3228 3857 185 118 36 chr10 108152127 108153571 -37435717 + MER52A LTR ERV1 1 1291 -165 280 258 60 18 chr10 108153732 108153899 -37435389 - L1M4 LINE L1 -752 5394 5221 310 272 133 52 chr10 108153965 108154425 -37434863 - L1M4 LINE L1 -1155 4991 4495 23 54 0 0 chr10 108154477 108154514 -37434774 + AT_rich Low_complexity Low_complexity 1 37 0 259 222 14 14 chr10 108155130 108155202 -37434086 - L1ME LINE L1 -296 5825 5754 1840 147 7 3 chr10 108155424 108155710 -37433578 + AluSg SINE Alu 3 289 -21 186 209 0 0 chr10 108157612 108157655 -37431633 + (CA)n Simple_repeat Simple_repeat 2 44 0 2278 110 3 7 chr10 108159824 108160132 -37429156 + AluSg SINE Alu 1 307 -3 28 29 0 0 chr10 108160169 108160204 -37429084 + AT_rich Low_complexity Low_complexity 1 35 0 242 289 0 36 chr10 108160973 108161056 -37428232 + MLT1J LTR MaLR 60 177 -311 2253 107 10 0 chr10 108161229 108161528 -37427760 + AluSx SINE Alu 1 302 -10 326 281 50 16 chr10 108161565 108161686 -37427602 + MLT1J LTR MaLR 335 459 -52 330 258 26 71 chr10 108161721 108161876 -37427412 - MIR SINE MIR -87 175 28 949 323 26 31 chr10 108162385 108162803 -37426485 + L3 LINE CR1 629 1044 -533 193 257 135 54 chr10 108162820 108162894 -37426394 + MIR SINE MIR 3 82 -180 2028 108 4 0 chr10 108163158 108163435 -37425853 + AluSp SINE Alu 1 278 -35 333 0 0 0 chr10 108163437 108163474 -37425814 + (CAAT)n Simple_repeat Simple_repeat 4 40 0 1149 116 11 21 chr10 108163489 108163679 -37425609 + L1PB1 LINE L1 5963 6150 -1 23 33 0 0 chr10 108163679 108163709 -37425579 + AT_rich Low_complexity Low_complexity 1 30 0 566 306 55 20 chr10 108163756 108163955 -37425333 + L3 LINE CR1 1271 1476 -101 351 364 116 9 chr10 108164037 108164262 -37425026 + MIR SINE MIR 2 250 -12 1708 173 25 7 chr10 108164987 108165270 -37424018 - AluJo SINE Alu -24 288 1 28 0 0 0 chr10 108165655 108165683 -37423605 + AT_rich Low_complexity Low_complexity 1 28 0 282 222 91 0 chr10 108165801 108165900 -37423388 + L1MB8 LINE L1 1295 1402 -5457 * 1061 263 21 33 chr10 108165894 108166373 -37422915 + L1MB8 LINE L1 1698 2170 -4789 1048 203 0 30 chr10 108166377 108166574 -37422714 + AluJo SINE Alu 101 291 -21 796 257 67 50 chr10 108166575 108166681 -37422607 + L1MB8 LINE L1 2311 2414 -4724 2409 84 7 0 chr10 108166681 108166979 -37422309 + AluY SINE Alu 1 300 -11 796 257 67 50 chr10 108166979 108167377 -37421911 + L1MB8 LINE L1 2414 2824 -4314 40953 31 23 1 chr10 108167387 108173407 -37415881 + L1PA2 LINE L1 1 6154 -1 361 180 36 0 chr10 108173513 108173621 -37415667 + L1MB8 LINE L1 2895 3009 -3948 658 244 67 35 chr10 108173629 108173944 -37415344 + L1MB8 LINE L1 3774 4098 -2859 500 221 9 43 chr10 108174016 108174203 -37415085 + L1MD2 LINE L1 6024 7827 -163 262 154 19 0 chr10 108174204 108174256 -37415032 + L1MC4a LINE L1 7752 7804 -4 2877 196 59 62 chr10 108174265 108174507 -37414781 + L1MB8 LINE L1 5761 6002 -987 1738 159 0 0 chr10 108174507 108174764 -37414524 + AluSx SINE Alu 1 257 -55 2877 196 59 62 chr10 108174764 108175266 -37414022 + L1MB8 LINE L1 6002 6504 -485 2796 7 0 0 chr10 108175266 108175569 -37413719 + AluYa5 SINE Alu 1 303 -8 2877 196 59 62 chr10 108175569 108175582 -37413706 + L1MB8 LINE L1 6504 6516 -473 1742 180 7 17 chr10 108175582 108175882 -37413406 + AluJo SINE Alu 1 297 -15 2877 196 59 62 chr10 108175882 108176362 -37412926 + L1MB8 LINE L1 6516 6988 -1 2464 160 20 18 chr10 108176375 108176863 -37412425 + L1MB3 LINE L1 5688 6176 -7 2292 91 0 7 chr10 108177576 108177872 -37411416 + AluY SINE Alu 1 294 -17 5928 207 92 87 chr10 108178207 108178875 -37410413 - L1MC4 LINE L1 -235 7807 7144 405 0 0 0 chr10 108178875 108178920 -37410368 + (TA)n Simple_repeat Simple_repeat 1 45 0 5928 207 92 87 chr10 108178920 108179380 -37409908 - L1MC4 LINE L1 -898 7144 6688 491 113 0 0 chr10 108179380 108179451 -37409837 + AluS SINE Alu 1 71 -240 2344 78 3 0 chr10 108179451 108179745 -37409543 + AluSc SINE Alu 11 305 -4 5928 207 92 87 chr10 108179745 108180137 -37409151 - L1MC4 LINE L1 -1354 6688 6300 2247 95 10 7 chr10 108180137 108180482 -37408806 - AluSg SINE Alu 0 310 1 5928 207 92 87 chr10 108180482 108181434 -37407854 - L1MC4 LINE L1 -1742 6300 5355 536 68 0 14 chr10 108181434 108181508 -37407780 + AluSc SINE Alu 226 298 -11 5928 207 92 87 chr10 108181508 108181618 -37407670 - L1MC4 LINE L1 -2687 5355 5247 2170 134 7 0 chr10 108181618 108181955 -37407333 - AluSx SINE Alu 0 312 1 5928 207 92 87 chr10 108181955 108182528 -37406760 - L1MC4 LINE L1 -2795 5247 4487 180 0 0 0 chr10 108182528 108182548 -37406740 + (TC)n Simple_repeat Simple_repeat 1 20 0 5928 207 92 87 chr10 108182548 108182584 -37406704 - L1MC4 LINE L1 -3555 4487 4453 598 131 16 7 chr10 108182602 108182726 -37406562 - L1 LINE L1 -2129 4017 3893 468 0 0 0 chr10 108182734 108182786 -37406502 + (CA)n Simple_repeat Simple_repeat 2 53 0 475 280 111 14 chr10 108182793 108183218 -37406070 - L1M4 LINE L1 -1538 4608 4143 305 125 0 0 chr10 108183355 108183403 -37405885 + LTR40a LTR ERVL 472 519 0 265 276 194 0 chr10 108183403 108183501 -37405787 - L1M4 LINE L1 -1999 4147 4031 2385 67 10 7 chr10 108183571 108183871 -37405417 + AluY SINE Alu 1 301 -10 2437 87 0 0 chr10 108183882 108184193 -37405095 + AluY SINE Alu 1 311 0 240 244 143 0 chr10 108184312 108184401 -37404887 - MER20B DNA MER1_type -29 190 87 546 186 21 0 chr10 108184449 108184546 -37404742 - MER58A DNA MER1_type 0 224 126 279 139 0 0 chr10 108184546 108184589 -37404699 + MER72 LTR ERV1 652 694 -28 616 183 43 0 chr10 108184621 108184736 -37404552 - MER58A DNA MER1_type 0 120 1 447 282 38 8 chr10 108184763 108184894 -37404394 - MIR3 SINE MIR -64 144 10 1662 164 76 0 chr10 108185442 108185759 -37403529 - MER2 DNA MER2_type 0 344 4 213 306 42 0 chr10 108185929 108186001 -37403287 + L3 LINE CR1 1499 1573 -4 1269 117 20 10 chr10 108186685 108186881 -37402407 - L1PA16 LINE L1 -9 6157 5960 258 284 60 60 chr10 108187120 108187254 -37402034 - L2 LINE L2 -34 3279 3146 1894 133 7 0 chr10 108187283 108187553 -37401735 + AluSx SINE Alu 37 308 -4 191 333 87 29 chr10 108188029 108188167 -37401121 - L2 LINE L2 -817 2497 2352 2356 100 3 0 chr10 108188310 108188621 -37400667 + AluSq SINE Alu 1 312 -1 971 169 0 0 chr10 108189294 108189466 -37399822 + MLT1B LTR MaLR 1 172 -218 29320 109 12 58 chr10 108189471 108195251 -37394037 + L1PA7 LINE L1 13 6057 -97 2175 121 3 16 chr10 108195251 108195566 -37393722 + AluSq SINE Alu 1 311 -2 29320 109 12 58 chr10 108195566 108195764 -37393524 + L1PA7 LINE L1 6057 5665 -489 2870 6 0 0 chr10 108195764 108196075 -37393213 + AluYa5 SINE Alu 1 311 0 29320 109 12 58 chr10 108196075 108196545 -37392743 + L1PA7 LINE L1 5664 6154 0 972 157 0 97 chr10 108196593 108196810 -37392478 + MLT1B LTR MaLR 192 387 -3 571 243 77 41 chr10 108196944 108197090 -37392198 - MIR3 SINE MIR -45 163 9 1058 265 25 71 chr10 108197281 108197371 -37391917 + L1MEc LINE L1 18 111 -6285 1930 85 4 0 chr10 108197371 108197618 -37391670 + AluY SINE Alu 1 248 -63 1058 265 25 71 chr10 108197618 108198007 -37391281 + L1MEc LINE L1 111 475 -5921 1526 167 61 6 chr10 108198013 108198416 -37390872 + LOR1b LTR ERV1 3 461 0 1514 238 49 72 chr10 108198416 108198898 -37390390 + L1MEc LINE L1 475 967 -5429 2321 119 7 0 chr10 108198898 108199208 -37390080 + AluSx SINE Alu 1 312 0 1514 238 49 72 chr10 108199208 108199444 -37389844 + L1MEc LINE L1 967 1207 -5189 270 0 0 0 chr10 108199444 108199474 -37389814 + (TA)n Simple_repeat Simple_repeat 1 30 0 210 37 0 0 chr10 108199473 108199500 -37389788 + (GA)n Simple_repeat Simple_repeat 2 28 0 * 1514 238 49 72 chr10 108199474 108199623 -37389665 + L1MEc LINE L1 1207 1297 -5099 2066 130 0 17 chr10 108199649 108199950 -37389338 + AluSx SINE Alu 1 296 -16 2519 87 0 0 chr10 108200125 108200435 -37388853 + AluY SINE Alu 2 311 0 1040 216 143 36 chr10 108200496 108200736 -37388552 + L1ME1 LINE L1 1137 1350 -5076 450 0 0 0 chr10 108200736 108200786 -37388502 + (CA)n Simple_repeat Simple_repeat 1 50 0 1040 216 143 36 chr10 108200786 108200894 -37388394 + L1ME1 LINE L1 1350 1445 -4981 2395 113 0 0 chr10 108200894 108201204 -37388084 + AluSg SINE Alu 1 310 0 1040 216 143 36 chr10 108201204 108201331 -37387957 + L1ME1 LINE L1 1445 1664 -4762 284 264 45 45 chr10 108201365 108201417 -37387871 + L1ME1 LINE L1 1813 1864 -4562 1819 168 0 24 chr10 108201417 108201715 -37387573 - AluJb SINE Alu -21 291 1 284 264 45 45 chr10 108201715 108201863 -37387425 + L1ME1 LINE L1 1863 2013 -4413 244 222 62 0 chr10 108201917 108201998 -37387290 + L1ME1 LINE L1 2192 2277 -4330 2238 191 44 1 chr10 108202020 108202649 -37386639 + L1ME1 LINE L1 5409 6056 -390 402 178 55 0 chr10 108202694 108202767 -37386521 - MER2 DNA MER2_type -268 77 1 357 175 93 0 chr10 108202769 108202866 -37386422 + L1ME1 LINE L1 6062 6167 -277 681 219 66 6 chr10 108202867 108203050 -37386238 + L1ME1 LINE L1 6223 6416 -30 289 306 20 0 chr10 108204747 108204845 -37384443 - MIR SINE MIR -3 259 160 576 314 0 27 chr10 108204860 108205045 -37384243 + MIR SINE MIR 19 198 -64 582 92 0 135 chr10 108205262 108205403 -37383885 + L1M1 LINE L1 12 133 -7432 * 14602 148 31 10 chr10 108205400 108207077 -37382211 + L1MA1 LINE L1 1099 2738 -4983 1519 196 29 4 chr10 108207077 108207358 -37381930 - AluJb SINE Alu -22 290 3 14602 148 31 10 chr10 108207358 108212146 -37377142 + L1MA1 LINE L1 2738 7721 0 251 182 39 52 chr10 108212182 108212259 -37377029 + MIR SINE MIR 145 220 -42 272 102 0 20 chr10 108212370 108212409 -37376879 + L1MB2 LINE L1 6092 6131 -40 2160 96 10 33 chr10 108212409 108212712 -37376576 + AluSx SINE Alu 1 296 -16 435 335 39 0 chr10 108212797 108212990 -37376298 + MIR SINE MIR 58 256 -6 3434 165 64 8 chr10 108213321 108214059 -37375229 - L1MB1 LINE L1 -3 6165 5387 3410 186 18 11 chr10 108214052 108214789 -37374499 - L1MB1 LINE L1 -1138 5008 4267 * 261 118 79 40 chr10 108214762 108214838 -37374450 + L1MB2 LINE L1 6093 6171 0 * 658 325 31 12 chr10 108215045 108215291 -37373997 + MIR SINE MIR 1 251 -11 213 359 99 35 chr10 108215849 108216192 -37373096 + L2 LINE L2 2489 2853 -461 201 111 63 16 chr10 108216731 108216794 -37372494 + (TAGA)n Simple_repeat Simple_repeat 3 68 0 475 160 20 140 chr10 108217108 108217183 -37372105 + MIR SINE MIR 77 127 -135 301 59 0 39 chr10 108217183 108217234 -37372054 + L1MA4 LINE L1 6246 6294 -6 475 160 20 140 chr10 108217234 108217308 -37371980 + MIR SINE MIR 127 208 -54 6467 213 101 32 chr10 108217321 108219274 -37370014 + L1MA8 LINE L1 460 2547 -4942 940 189 42 15 chr10 108219274 108219533 -37369755 + Tigger2 DNA MER2_type 1 266 -2452 1642 192 33 11 chr10 108219533 108219893 -37369395 + L1PA16 LINE L1 5798 6165 -1 2040 123 18 0 chr10 108219936 108220220 -37369068 + AluSg SINE Alu 1 289 -21 3182 179 17 3 chr10 108220257 108220859 -37368429 + Tigger2 DNA MER2_type 247 856 -1862 616 190 63 63 chr10 108220857 108220949 -37368339 + Tigger2 DNA MER2_type 2558 2652 -66 * 1478 143 155 0 chr10 108220949 108221207 -37368081 + AluJb SINE Alu 2 299 -3 616 190 63 63 chr10 108221207 108221272 -37368016 + Tigger2 DNA MER2_type 2651 2715 -3 1453 251 39 8 chr10 108221287 108221852 -37367436 + L1M4c LINE L1 2273 2975 -4521 324 279 77 27 chr10 108222118 108222301 -37366987 + L1M4c LINE L1 3203 3394 -4173 1211 105 15 15 chr10 108222319 108222519 -37366769 - MER44D DNA MER2_type -7 598 399 23 33 0 0 chr10 108222519 108222549 -37366739 + AT_rich Low_complexity Low_complexity 1 30 0 278 174 194 103 chr10 108222560 108222715 -37366573 - MER44D DNA MER2_type -170 439 1 13594 164 61 15 chr10 108222715 108222913 -37366375 + L1MA8 LINE L1 3401 3588 -4122 1818 183 7 7 chr10 108222913 108223219 -37366069 + AluJb SINE Alu 1 306 -6 13594 164 61 15 chr10 108223219 108224202 -37365086 + L1MA8 LINE L1 3588 4524 -3186 2356 95 0 0 chr10 108224202 108224498 -37364790 - AluSg SINE Alu -14 296 1 13594 164 61 15 chr10 108224498 108227428 -37361860 + L1MA8 LINE L1 4524 7707 -3 192 205 0 0 chr10 108227431 108227470 -37361818 + L2 LINE L2 3263 3301 -12 585 243 86 7 chr10 108228233 108228373 -37360915 + MIR SINE MIR 46 196 -66 3267 168 35 8 chr10 108228373 108229105 -37360183 + L1MB7 LINE L1 5147 5899 -285 * 5406 94 13 30 chr10 108229097 108230026 -37359262 + L1PA8 LINE L1 5135 6044 -128 2283 93 0 20 chr10 108230135 108230436 -37358852 - AluSc SINE Alu -14 295 1 299 273 125 0 chr10 108231259 108231347 -37357941 - MIR SINE MIR -115 147 49 343 268 39 8 chr10 108232868 108232995 -37356293 - MIR SINE MIR 0 262 132 398 184 70 184 chr10 108233012 108233073 -37356215 - MER5B DNA MER1_type 0 178 112 1423 194 47 0 chr10 108233073 108233351 -37355937 + AluJo SINE Alu 1 291 -21 398 184 70 184 chr10 108233351 108233490 -37355798 - MER5B DNA MER1_type -66 112 1 2302 73 45 0 chr10 108233679 108233967 -37355321 - AluSq SINE Alu -12 301 1 238 381 79 16 chr10 108234146 108234272 -37355016 - L2 LINE L2 -7 3265 3132 328 269 7 110 chr10 108235014 108235159 -37354129 + MIR SINE MIR 5 134 -128 1018 177 27 0 chr10 108235970 108236156 -37353132 + MIR SINE MIR 72 262 0 297 0 0 0 chr10 108237243 108237276 -37352012 + (CA)n Simple_repeat Simple_repeat 2 34 0 1326 175 30 15 chr10 108239231 108239494 -37349794 - L1MD3 LINE L1 -340 7655 7389 438 184 103 0 chr10 108239494 108239581 -37349707 - MLT1F1 LTR MaLR -471 96 1 682 197 36 7 chr10 108239585 108239722 -37349566 - L1MD3 LINE L1 -718 7277 7137 215 306 14 0 chr10 108240452 108240524 -37348764 + L2 LINE L2 3191 3263 -9 198 325 69 31 chr10 108240499 108240659 -37348629 - L2 LINE L2 -3 3310 3145 * 312 250 0 0 chr10 108240664 108240732 -37348556 + L1MC4 LINE L1 6636 6703 -1339 1886 158 7 3 chr10 108241713 108242010 -37347278 + AluSx SINE Alu 1 298 -14 21 0 0 0 chr10 108243354 108243375 -37345913 + AT_rich Low_complexity Low_complexity 1 21 0 189 0 0 0 chr10 108244549 108244570 -37344718 + (CCA)n Simple_repeat Simple_repeat 3 23 0 21 0 0 0 chr10 108246279 108246300 -37342988 + AT_rich Low_complexity Low_complexity 1 21 0 273 57 0 0 chr10 108246446 108246481 -37342807 + (CA)n Simple_repeat Simple_repeat 1 35 0 237 128 0 0 chr10 108247287 108247334 -37341954 + (TC)n Simple_repeat Simple_repeat 1 47 0 237 128 0 0 chr10 108247335 108247382 -37341906 + (T)n Simple_repeat Simple_repeat 1 47 0 188 86 29 0 chr10 108249078 108249113 -37340175 + (TG)n Simple_repeat Simple_repeat 1 36 0 198 191 24 0 chr10 108249224 108249266 -37340022 + L2 LINE L2 3271 3313 0 25 0 0 0 chr10 108249470 108249495 -37339793 + AT_rich Low_complexity Low_complexity 1 25 0 2208 108 6 13 chr10 108250227 108250541 -37338747 + AluSq SINE Alu 1 312 -1 2291 105 3 3 chr10 108250843 108251148 -37338140 - AluSx SINE Alu -7 305 1 2379 118 0 0 chr10 108251325 108251638 -37337650 + AluSq SINE Alu 1 313 0 2449 78 0 7 chr10 108251823 108252130 -37337158 - AluY SINE Alu -6 305 1 316 247 58 98 chr10 108252444 108252618 -37336670 - MIR SINE MIR -81 181 15 339 322 67 1 chr10 108252687 108252824 -37336464 + MIR SINE MIR 16 151 -67 1782 169 10 14 chr10 108252899 108253195 -37336093 + AluJo SINE Alu 4 298 -14 583 262 104 40 chr10 108254090 108254292 -37334996 + MIR SINE MIR 20 234 -28 2227 113 0 0 chr10 108254492 108254785 -37334503 + AluY SINE Alu 3 295 -16 1962 130 0 0 chr10 108255093 108255369 -37333919 + AluSx SINE Alu 22 297 -15 1039 80 7 14 chr10 108255596 108255734 -37333554 - AluY SINE Alu -174 137 1 261 338 50 43 chr10 108255817 108255956 -37333332 + L2 LINE L2 3125 3264 -8 547 290 58 34 chr10 108256281 108256609 -37332679 - L1ME LINE L1 -383 5781 5446 335 154 0 0 chr10 108256946 108256998 -37332290 - MER5B DNA MER1_type -126 52 1 1358 196 15 26 chr10 108257504 108257831 -37331457 + AluJb SINE Alu 16 339 0 1646 71 0 0 chr10 108257882 108258078 -37331210 + AluY SINE Alu 1 196 -115 1223 124 11 0 chr10 108258203 108258380 -37330908 + AluSc SINE Alu 114 292 -17 241 289 0 12 chr10 108258609 108258692 -37330596 - MIR3 SINE MIR -1 207 126 1849 124 1 16 chr10 108259008 108259319 -37329969 + L1PA16 LINE L1 2683 2989 -3860 2203 134 150 5 chr10 108259319 108259693 -37329595 + MSTA LTR MaLR 1 428 0 10009 168 25 4 chr10 108259693 108261310 -37327978 + MSTA-int LTR MaLR 1 1651 0 2285 129 132 31 chr10 108261310 108261483 -37327805 + MSTA LTR MaLR 1 155 -273 2295 97 10 3 chr10 108261483 108261781 -37327507 + AluSq SINE Alu 1 300 -13 2285 129 132 31 chr10 108261781 108261994 -37327294 + MSTA LTR MaLR 155 426 -2 11627 195 38 23 chr10 108261994 108263364 -37325924 + L1PA16 LINE L1 3199 4547 -2322 1421 203 17 48 chr10 108263364 108263659 -37325629 + AluJb SINE Alu 1 286 -26 11627 195 38 23 chr10 108263659 108264216 -37325072 + L1PA16 LINE L1 4547 5094 -1775 2564 60 0 3 chr10 108264216 108264518 -37324770 + AluY SINE Alu 1 301 -10 11627 195 38 23 chr10 108264518 108266176 -37323112 + L1PA16 LINE L1 5094 6865 -4 1713 239 7 5 chr10 108266314 108266719 -37322569 + L1MB8 LINE L1 5772 6177 -1 901 277 206 2 chr10 108266888 108267159 -37322129 + L1ME LINE L1 3536 3751 -2395 396 103 0 0 chr10 108267159 108267217 -37322071 + (CA)n Simple_repeat Simple_repeat 2 59 0 901 277 206 2 chr10 108267217 108267382 -37321906 + L1ME LINE L1 3751 4061 -2085 1295 182 108 92 chr10 108267387 108267449 -37321839 + MSTA LTR MaLR 1 61 -335 2044 165 131 8 chr10 108267449 108267830 -37321458 - MSTA LTR MaLR 0 428 1 1295 182 108 92 chr10 108267830 108268157 -37321131 + MSTA LTR MaLR 61 396 0 1018 238 4 0 chr10 108268157 108268392 -37320896 + L1ME LINE L1 4066 4301 -1845 2253 84 0 27 chr10 108268393 108268505 -37320783 + AluSc SINE Alu 1 114 -195 8263 86 8 19 chr10 108268505 108269588 -37319700 + MER11C LTR ERVK 1 1071 0 2253 84 0 27 chr10 108269588 108269773 -37319515 + AluSc SINE Alu 114 290 -19 3994 194 38 49 chr10 108269773 108270678 -37318610 + L1ME LINE L1 4290 5176 -990 1932 120 0 8 chr10 108270678 108270945 -37318343 + AluSp SINE Alu 34 298 -15 3994 194 38 49 chr10 108270945 108271208 -37318080 + L1ME LINE L1 5176 5440 -726 2211 132 11 46 chr10 108271304 108271653 -37317635 + MER1B DNA MER1_type 1 337 0 398 105 18 0 chr10 108271895 108271952 -37317336 + LTR7 LTR ERV1 393 450 0 1637 206 61 16 chr10 108271952 108272379 -37316909 + HERVH LTR ERV1 1 446 -7267 13174 129 4 14 chr10 108272404 108274455 -37314833 + HERVH LTR ERV1 800 2830 -4883 1433 164 0 4 chr10 108274455 108274686 -37314602 + HERVH LTR ERV1 3357 3586 -4127 * 3617 170 11 19 chr10 108274675 108275493 -37313795 + HERVH LTR ERV1 3800 4719 -1935 1545 125 0 65 chr10 108275484 108275697 -37313591 + HERVH LTR ERV1 5756 5948 -1765 * 2375 103 0 0 chr10 108275697 108276008 -37313280 - AluY SINE Alu 0 311 1 1545 125 0 65 chr10 108276008 108276073 -37313215 + HERVH LTR ERV1 5948 6016 -1697 * 3526 125 14 5 chr10 108276066 108276618 -37312670 + HERVH LTR ERV1 7157 7713 0 1428 176 199 36 chr10 108276618 108277005 -37312283 + LTR7 LTR ERV1 1 450 0 1502 92 65 14 chr10 108277005 108277222 -37312066 + L1PA11 LINE L1 5941 6168 -6 13119 185 27 28 chr10 108277233 108279124 -37310164 + L1PB1 LINE L1 1 1893 -4974 2244 108 7 0 chr10 108279124 108279431 -37309857 + AluSg SINE Alu 2 310 0 13119 185 27 28 chr10 108279431 108279983 -37309305 + L1PB1 LINE L1 1893 2444 -4423 2239 100 0 13 chr10 108279983 108280283 -37309005 + AluSg SINE Alu 1 296 -14 13119 185 27 28 chr10 108280283 108280494 -37308794 + L1PB1 LINE L1 2444 2654 -4213 2145 110 7 13 chr10 108280494 108280795 -37308493 + AluSq SINE Alu 1 299 -14 13119 185 27 28 chr10 108280795 108283016 -37306272 + L1PB1 LINE L1 2654 4877 -1990 207 0 0 0 chr10 108283016 108283039 -37306249 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 13119 185 27 28 chr10 108283039 108283614 -37305674 + L1PB1 LINE L1 4877 5451 -1416 2289 96 3 0 chr10 108283614 108283906 -37305382 + AluSg SINE Alu 3 295 -15 13119 185 27 28 chr10 108283906 108285046 -37304242 + L1PB1 LINE L1 5451 6867 0 262 308 13 0 chr10 108285326 108285404 -37303884 + (TGGA)n Simple_repeat Simple_repeat 4 82 0 2033 102 42 7 chr10 108285688 108285971 -37303317 + AluSx SINE Alu 4 296 -16 304 92 0 77 chr10 108285991 108286056 -37303232 + L1PA7 LINE L1 6095 6154 0 356 256 12 0 chr10 108286603 108286685 -37302603 - MIR3 SINE MIR -10 198 116 367 239 31 39 chr10 108287026 108287156 -37302132 + MER94 DNA DNA 5 133 -1 198 240 60 0 chr10 108287715 108287765 -37301523 + L2 LINE L2 3261 3313 0 475 322 22 28 chr10 108288952 108289132 -37300156 + L3 LINE CR1 1293 1471 -106 2316 85 24 0 chr10 108289437 108289732 -37299556 + AluSx SINE Alu 1 302 -10 350 232 213 19 chr10 108289799 108289954 -37299334 + L1ME4a LINE L1 5936 6120 -1 22 0 0 0 chr10 108289954 108289976 -37299312 + AT_rich Low_complexity Low_complexity 1 22 0 262 314 59 17 chr10 108289981 108290099 -37299189 - MLT1L LTR MaLR -145 470 348 299 255 106 21 chr10 108290155 108290296 -37298992 - MLT1J LTR MaLR -358 153 1 320 326 70 0 chr10 108290296 108290429 -37298859 + MIR SINE MIR 36 183 -79 189 212 0 0 chr10 108290440 108290473 -37298815 + L2 LINE L2 3222 3254 -18 464 221 38 46 chr10 108291623 108291754 -37297534 + MIR3 SINE MIR 3 132 -76 209 256 0 0 chr10 108292305 108292348 -37296940 + L2 LINE L2 3102 3144 -128 278 318 11 0 chr10 108292393 108292481 -37296807 + MIR SINE MIR 48 136 -126 273 242 81 0 chr10 108292479 108292541 -37296747 - L2 LINE L2 0 3313 3247 * 905 198 48 0 chr10 108292531 108292718 -37296570 + MIR SINE MIR 29 224 -38 33 106 0 15 chr10 108292766 108292965 -37296323 + AT_rich Low_complexity Low_complexity 1 196 0 295 352 0 0 chr10 108293369 108293460 -37295828 - L2 LINE L2 -494 2820 2730 5163 212 35 52 chr10 108293460 108293599 -37295689 + L1MB4 LINE L1 2250 2390 -3756 2329 97 0 0 chr10 108293599 108293897 -37295391 + AluY SINE Alu 1 298 -13 5163 212 35 52 chr10 108293897 108294524 -37294764 + L1MB4 LINE L1 2390 3026 -3120 2458 73 0 19 chr10 108294524 108294838 -37294450 + AluY SINE Alu 1 308 -3 5163 212 35 52 chr10 108294838 108294979 -37294309 + L1MB4 LINE L1 3026 3168 -2978 906 168 31 0 chr10 108294979 108295140 -37294148 + FRAM SINE Alu 1 166 0 5163 212 35 52 chr10 108295140 108296067 -37293221 + L1MB4 LINE L1 3168 4055 -2091 766 165 16 118 chr10 108296054 108296309 -37292979 + L1MB4 LINE L1 4940 5168 -978 * 679 92 0 0 chr10 108296311 108296409 -37292879 - L1PA13 LINE L1 -5 6158 6061 713 43 0 0 chr10 108296409 108296503 -37292785 + L1P4 LINE L1 5711 5804 -370 451 243 20 7 chr10 108296496 108296648 -37292640 + L1MB4 LINE L1 5152 5305 -841 * 265 103 0 0 chr10 108296670 108296709 -37292579 - L1PA15 LINE L1 -9 6156 6118 1639 172 20 17 chr10 108296770 108297067 -37292221 + AluJb SINE Alu 1 298 -14 441 195 8 23 chr10 108297083 108297211 -37292077 + GA-rich Low_complexity Low_complexity 1 126 0 3510 166 68 40 chr10 108297213 108297266 -37292022 + L1MB4 LINE L1 5319 5369 -811 1827 162 7 7 chr10 108297266 108297550 -37291738 + AluSg SINE Alu 1 284 -26 3510 166 68 40 chr10 108297550 108298335 -37290953 + L1MB4 LINE L1 5369 6180 0 470 303 193 5 chr10 108298407 108298625 -37290663 - MIR SINE MIR -1 261 3 343 276 69 0 chr10 108298662 108298749 -37290539 + L2 LINE L2 3172 3264 -8 1051 285 24 6 chr10 108298780 108299113 -37290175 - LTR16B LTR ERVL -1 463 125 283 235 73 0 chr10 108299750 108299818 -37289470 + MIR3 SINE MIR 88 160 -48 993 231 104 58 chr10 108300168 108300631 -37288657 + HAL1 LINE L1 1710 2193 -314 36 40 0 0 chr10 108301714 108301764 -37287524 + AT_rich Low_complexity Low_complexity 1 50 0 256 359 29 10 chr10 108301895 108301998 -37287290 + L2 LINE L2 3159 3263 -9 372 319 93 24 chr10 108302258 108302436 -37286852 + MIR3 SINE MIR 10 202 -6 2437 93 0 0 chr10 108302925 108303226 -37286062 + AluSc SINE Alu 1 301 -8 303 306 27 61 chr10 108303233 108303380 -37285908 - MIR3 SINE MIR -18 190 49 245 291 63 47 chr10 108303918 108304045 -37285243 - L2 LINE L2 0 3313 3185 421 273 55 9 chr10 108304056 108304166 -37285122 - L2 LINE L2 -8 3305 3191 1101 153 96 64 chr10 108304168 108304482 -37284806 - MER33 DNA MER1_type 0 324 1 229 343 0 0 chr10 108304938 108305005 -37284283 - L2 LINE L2 -208 3064 2998 219 286 0 43 chr10 108305798 108305868 -37283420 + MIR SINE MIR 2 68 -194 543 77 77 18 chr10 108305954 108306124 -37283164 + (TA)n Simple_repeat Simple_repeat 1 180 0 1895 107 3 75 chr10 108306273 108306581 -37282707 + AluSx SINE Alu 1 286 -26 629 259 171 0 chr10 108306756 108306961 -37282327 - MIR SINE MIR -21 241 2 290 248 53 23 chr10 108306972 108307105 -37282183 + L1ME4a LINE L1 5770 5906 -215 190 283 117 0 chr10 108307411 108307471 -37281817 + MIR SINE MIR 126 192 -70 213 333 0 15 chr10 108307542 108307608 -37281680 + L2 LINE L2 3005 3069 -203 1998 171 106 14 chr10 108307872 108308317 -37280971 + MER66B LTR ERV1 1 486 0 590 250 88 5 chr10 108308615 108308807 -37280481 + MER66B-int LTR ERV1 191 398 -6278 2887 217 86 26 chr10 108308813 108309582 -37279706 + MER66B-int LTR ERV1 292 1106 -5570 597 258 33 0 chr10 108309668 108309819 -37279469 + MER66B-int LTR ERV1 2947 3102 -3574 8686 247 26 21 chr10 108309916 108310290 -37278998 + MER66B-int LTR ERV1 1210 1581 -6124 2461 82 0 0 chr10 108310290 108310593 -37278695 - AluSc SINE Alu -6 303 1 8686 247 26 21 chr10 108310593 108313097 -37276191 + MER66B-int LTR ERV1 1581 3871 -3834 865 116 14 7 chr10 108313100 108313238 -37276050 + THE1B LTR MaLR 226 364 0 4058 280 18 27 chr10 108313241 108315416 -37273872 + MER66B-int LTR ERV1 3536 6177 -1579 2017 106 47 0 chr10 108315418 108315738 -37273550 + MER66B-int LTR ERV1 6330 6664 -12 2196 169 79 2 chr10 108315738 108316182 -37273106 + MER66B LTR ERV1 9 486 0 192 125 0 0 chr10 108317145 108317177 -37272111 + (GGAA)n Simple_repeat Simple_repeat 3 34 0 499 264 30 34 chr10 108317279 108317574 -37271714 + L1ME LINE L1 739 1032 -5087 360 148 0 0 chr10 108317574 108317635 -37271653 + (CA)n Simple_repeat Simple_repeat 1 61 0 414 252 124 33 chr10 108317636 108317846 -37271442 + L1ME LINE L1 981 1209 -4910 1500 212 51 18 chr10 108317861 108318253 -37271035 + LTR52 LTR ERVL 12 416 -5 2316 215 43 84 chr10 108318257 108318316 -37270972 + LTR52-int LTR ERVL 1 61 -3495 2316 67 3 3 chr10 108318316 108318630 -37270658 - AluSp SINE Alu 0 314 1 2316 215 43 84 chr10 108318630 108319270 -37270018 + LTR52-int LTR ERVL 61 672 -2884 324 0 0 0 chr10 108319453 108319489 -37269799 + (CA)n Simple_repeat Simple_repeat 1 36 0 2946 140 31 48 chr10 108319557 108319726 -37269562 + L1MB7 LINE L1 5567 5737 -447 2228 108 27 0 chr10 108319726 108320022 -37269266 + AluSx SINE Alu 1 304 -8 2946 140 31 48 chr10 108320022 108320162 -37269126 + L1MB7 LINE L1 5737 5878 -306 3446 129 2 0 chr10 108320162 108320675 -37268613 + MER75 DNA T2_type 1 514 0 2946 140 31 48 chr10 108320675 108320972 -37268316 + L1MB7 LINE L1 5878 6164 -20 682 249 29 0 chr10 108320969 108321174 -37268114 + L1ME LINE L1 5307 5517 -647 * 727 193 33 0 chr10 108321193 108321343 -37267945 + MER58A DNA MER1_type 41 195 -29 595 231 0 38 chr10 108321369 108321490 -37267798 + L1ME LINE L1 5507 5618 -546 1665 203 144 11 chr10 108321490 108321933 -37267355 - MLT1D LTR MaLR 0 505 4 595 231 0 38 chr10 108321933 108321985 -37267303 + L1ME LINE L1 5618 5670 -494 1271 197 74 61 chr10 108322062 108322249 -37267039 - Charlie2 DNA MER1_type -63 2799 2616 2104 117 0 7 chr10 108322249 108322539 -37266749 - AluSx SINE Alu -14 298 11 1271 197 74 61 chr10 108322539 108322890 -37266398 - Charlie2 DNA MER1_type -246 2616 2254 9259 125 26 22 chr10 108322893 108324457 -37264831 + Tigger1 DNA MER2_type 2 1571 -847 753 177 0 0 chr10 108324458 108324588 -37264700 + MSTA LTR MaLR 30 159 -269 731 92 9 0 chr10 108374596 108374705 -37214583 + (GAAA)n Simple_repeat Simple_repeat 1 110 0 1438 248 47 14 chr10 108374720 108375163 -37214125 + L1MEc LINE L1 513 970 -5426 3669 140 30 36 chr10 108375386 108375607 -37213681 - L1MB2 LINE L1 -2 6169 5948 2236 100 7 10 chr10 108375607 108375916 -37213372 - AluSq SINE Alu -5 308 1 3669 140 30 36 chr10 108375916 108376392 -37212896 - L1MB2 LINE L1 -223 5948 5476 326 82 27 55 chr10 108376397 108376470 -37212818 - L1PA13 LINE L1 0 6163 6093 297 189 0 0 chr10 108376470 108376523 -37212765 - L1MB2 LINE L1 -691 5480 5428 234 125 0 0 chr10 108376524 108376572 -37212716 - AluSp SINE Alu -1 302 255 1509 96 35 0 chr10 108376578 108376777 -37212511 - AluSp SINE Alu -101 212 7 763 122 32 4 chr10 108376781 108376944 -37212344 - L1MB2 LINE L1 -730 5441 5263 7440 212 78 69 chr10 108376946 108377175 -37212113 + L1MEc LINE L1 1013 1238 -4997 1806 169 0 23 chr10 108377175 108377476 -37211812 - AluJb SINE Alu -7 305 12 7440 212 78 69 chr10 108377476 108378720 -37210568 + L1MEc LINE L1 1238 2469 -3766 1545 209 0 26 chr10 108378720 108379027 -37210261 + AluJb SINE Alu 6 304 -8 7440 212 78 69 chr10 108379027 108379535 -37209753 + L1MEc LINE L1 2469 2971 -3264 2094 115 0 0 chr10 108379535 108379813 -37209475 + AluSx SINE Alu 1 278 -34 7440 212 78 69 chr10 108379813 108381679 -37207609 + L1MEc LINE L1 2971 4818 -1417 5721 108 54 23 chr10 108381679 108381708 -37207580 + L1PA16 LINE L1 4301 4328 -1838 2448 84 7 3 chr10 108381708 108382018 -37207270 - AluSq SINE Alu -2 311 1 5721 108 54 23 chr10 108382018 108383824 -37205464 + L1PA16 LINE L1 4328 6166 0 2113 93 50 0 chr10 108383829 108384107 -37205181 - AluSc SINE Alu -17 292 1 7440 212 78 69 chr10 108384107 108384380 -37204908 + L1MEc LINE L1 4821 5090 -1145 1692 161 3 70 chr10 108384380 108384533 -37204755 + AluJb SINE Alu 1 122 -190 2249 107 0 3 chr10 108384533 108384832 -37204456 + AluSx SINE Alu 1 298 -14 1692 161 3 70 chr10 108384832 108385008 -37204280 + AluJb SINE Alu 122 308 -4 7440 212 78 69 chr10 108385008 108385633 -37203655 + L1MEc LINE L1 5090 5795 -440 675 193 10 132 chr10 108385633 108385830 -37203458 + MER5A DNA MER1_type 15 187 -2 484 141 179 96 chr10 108385899 108385996 -37203292 - MER5A DNA MER1_type 0 189 73 1730 148 12 49 chr10 108385996 108386320 -37202968 - AluJo SINE Alu 0 312 1 484 141 179 96 chr10 108386320 108386378 -37202910 - MER5A DNA MER1_type -116 73 21 711 147 76 114 chr10 108386636 108386746 -37202542 - MER5B DNA MER1_type 0 178 76 1741 164 7 3 chr10 108386746 108387032 -37202256 - AluJo SINE Alu -15 297 11 711 147 76 114 chr10 108387032 108387105 -37202183 - MER5B DNA MER1_type -102 76 2 515 272 54 7 chr10 108387145 108387292 -37201996 - L2 LINE L2 -3 3269 3116 340 326 202 31 chr10 108387334 108387656 -37201632 - L2 LINE L2 -5 3267 2891 25 0 0 0 chr10 108388507 108388532 -37200756 + AT_rich Low_complexity Low_complexity 1 25 0 2102 87 39 36 chr10 108388786 108389095 -37200193 + L1PA11 LINE L1 5864 6173 -1 225 250 73 0 chr10 108389109 108389177 -37200111 + L2 LINE L2 3241 3313 0 808 266 97 0 chr10 108389317 108389543 -37199745 - MIR SINE MIR -13 249 2 824 189 35 0 chr10 108390025 108390168 -37199120 - FRAM SINE Alu -19 157 10 2350 91 10 0 chr10 108390179 108390487 -37198801 - AluSp SINE Alu -2 311 1 252 0 0 0 chr10 108390551 108390579 -37198709 + (TTCA)n Simple_repeat Simple_repeat 2 29 0 500 223 41 8 chr10 108390580 108390701 -37198587 - L2 LINE L2 -13 3300 3176 25 0 0 0 chr10 108391025 108391050 -37198238 + AT_rich Low_complexity Low_complexity 1 25 0 513 200 30 0 chr10 108391943 108392043 -37197245 + MER5A DNA MER1_type 10 112 -77 198 0 0 0 chr10 108392199 108392221 -37197067 + (TTA)n Simple_repeat Simple_repeat 1 22 0 2478 85 0 7 chr10 108392227 108392534 -37196754 + AluSc SINE Alu 1 305 -4 24 0 0 0 chr10 108392562 108392586 -37196702 + AT_rich Low_complexity Low_complexity 1 24 0 272 287 43 32 chr10 108392721 108392815 -37196473 - MER5B DNA MER1_type 0 178 84 829 257 73 22 chr10 108392966 108393354 -37195934 + L1MC4a LINE L1 5616 6017 -104 26 82 0 0 chr10 108393503 108393564 -37195724 + AT_rich Low_complexity Low_complexity 1 61 0 2312 78 0 3 chr10 108394890 108395207 -37194081 - AluY SINE Alu 0 316 1 384 200 64 45 chr10 108395226 108395336 -37193952 - MER5A DNA MER1_type -77 112 1 230 296 57 23 chr10 108395766 108395854 -37193434 - L2 LINE L2 -4 3268 3178 23 33 0 0 chr10 108395922 108395952 -37193336 + AT_rich Low_complexity Low_complexity 1 30 0 1231 178 10 0 chr10 108395952 108396154 -37193134 - MER2 DNA MER2_type -136 209 6 399 368 38 36 chr10 108396272 108396524 -37192764 - L2 LINE L2 -198 3074 2822 1726 109 120 0 chr10 108396524 108396799 -37192489 + L1MA4A LINE L1 5984 6291 -12 399 368 38 36 chr10 108396799 108396861 -37192427 - L2 LINE L2 -450 2822 2762 195 314 195 0 chr10 108396927 108397096 -37192192 - L2 LINE L2 -1083 2231 2030 * 291 237 86 32 chr10 108397088 108397181 -37192107 - MIR SINE MIR -149 113 16 309 109 0 0 chr10 108397789 108397835 -37191453 + (TA)n Simple_repeat Simple_repeat 1 46 0 278 300 88 38 chr10 108397848 108398072 -37191216 - L1MC4a LINE L1 -162 5959 5723 630 238 76 17 chr10 108398774 108398946 -37190342 + L2 LINE L2 3132 3313 0 920 253 81 35 chr10 108399288 108399632 -37189656 - L3 LINE CR1 -531 1046 687 211 349 103 40 chr10 108401280 108401406 -37187882 + L2 LINE L2 3129 3262 -10 312 27 0 0 chr10 108401559 108401596 -37187692 + (CA)n Simple_repeat Simple_repeat 2 38 0 189 0 0 0 chr10 108401595 108401616 -37187672 + (GA)n Simple_repeat Simple_repeat 2 22 0 * 283 331 113 7 chr10 108401632 108401783 -37187505 - MIR SINE MIR -29 233 67 189 241 203 0 chr10 108402982 108403061 -37186227 + MIR3 SINE MIR 68 162 -46 213 254 63 0 chr10 108403154 108403217 -37186071 + MIR SINE MIR 189 255 -7 749 174 7 43 chr10 108403406 108403544 -37185744 - FLAM_A SINE Alu 0 133 1 252 160 13 107 chr10 108403823 108403898 -37185390 + L3 LINE CR1 1406 1473 -104 226 228 35 35 chr10 108404952 108405009 -37184279 + L3 LINE CR1 1518 1574 -3 615 259 58 39 chr10 108405386 108405591 -37183697 - MIR SINE MIR -1 261 53 222 326 0 56 chr10 108406877 108406966 -37182322 - MIR SINE MIR -130 132 49 1039 181 6 0 chr10 108407258 108407440 -37181848 + L1PB1 LINE L1 5969 6151 0 2361 92 0 22 chr10 108407942 108408259 -37181029 + AluSg SINE Alu 1 310 0 275 319 92 0 chr10 108408289 108408430 -37180858 + MIR SINE MIR 75 228 -34 2151 115 3 6 chr10 108408901 108409214 -37180074 - L1MB3 LINE L1 -7 6176 5865 1878 107 0 4 chr10 108409289 108409542 -37179746 - AluSx SINE Alu 0 312 61 258 289 20 16 chr10 108410244 108410367 -37178921 + MLT1L LTR MaLR 462 611 -3 1619 227 3 20 chr10 108410403 108410751 -37178537 + MLT1A2 LTR MaLR 32 373 -1 210 271 17 0 chr10 108410991 108411050 -37178238 + GA-rich Low_complexity Low_complexity 2 61 0 208 273 102 62 chr10 108411376 108411504 -37177784 + MIR SINE MIR 18 150 -58 2049 146 3 0 chr10 108411787 108412081 -37177207 - AluSx SINE Alu -17 295 1 244 294 199 7 chr10 108412231 108412367 -37176921 + MER117 DNA MER1_type 1 162 -35 2231 98 10 16 chr10 108412438 108412745 -37176543 + AluSx SINE Alu 1 305 -7 1982 130 17 7 chr10 108413693 108413993 -37175295 - AluSx SINE Alu -9 303 1 375 291 0 32 chr10 108414249 108414407 -37174881 + T-rich Low_complexity Low_complexity 2 154 0 312 219 27 0 chr10 108414595 108414668 -37174620 - MER103 DNA DNA -83 83 9 745 291 114 43 chr10 108414932 108415102 -37174186 + L1ME4a LINE L1 5445 5601 -520 1939 163 0 0 chr10 108415102 108415397 -37173891 + AluJo SINE Alu 1 295 -17 745 291 114 43 chr10 108415397 108415858 -37173430 + L1ME4a LINE L1 5601 6121 0 28 0 0 0 chr10 108416126 108416154 -37173134 + AT_rich Low_complexity Low_complexity 1 28 0 637 214 24 0 chr10 108417965 108418091 -37171197 - MER5B DNA MER1_type 0 178 50 257 347 102 12 chr10 108419037 108419204 -37170084 + L2 LINE L2 2871 3052 -220 720 194 194 10 chr10 108419280 108419476 -37169812 - MIR SINE MIR -3 259 28 1478 232 138 7 chr10 108420186 108420599 -37168689 + L1MEc LINE L1 35 501 -5895 1668 181 17 0 chr10 108420600 108420887 -37168401 + AluJo SINE Alu 1 292 -20 605 13 0 13 chr10 108420891 108420966 -37168322 + (GGAA)n Simple_repeat Simple_repeat 2 75 0 2144 110 3 0 chr10 108420966 108421425 -37167863 + AluSx SINE Alu 2 461 0 1115 102 6 6 chr10 108421248 108421504 -37167784 + (GAAA)n Simple_repeat Simple_repeat 2 257 0 1244 128 0 44 chr10 108421636 108421840 -37167448 + MSTA LTR MaLR 234 428 0 5052 116 50 28 chr10 108421840 108422229 -37167059 + Tigger1 DNA MER2_type 1567 1946 -472 2280 92 7 10 chr10 108422229 108422535 -37166753 - AluSc SINE Alu -4 305 1 5052 116 50 28 chr10 108422535 108422798 -37166490 + Tigger1 DNA MER2_type 1946 2245 -173 1798 179 0 0 chr10 108422798 108423099 -37166189 - AluJb SINE Alu -11 301 1 5052 116 50 28 chr10 108423099 108423278 -37166010 + Tigger1 DNA MER2_type 2245 2418 0 1177 212 109 11 chr10 108423278 108423635 -37165653 - Charlie2 DNA MER1_type -609 2253 1862 1054 186 80 90 chr10 108423697 108424096 -37165192 - Charlie4a DNA MER1_type -112 396 2 210 308 17 26 chr10 108424107 108424224 -37165064 + GA-rich Low_complexity Low_complexity 1 116 0 183 42 0 0 chr10 108425412 108425436 -37163852 + (TGG)n Simple_repeat Simple_repeat 2 25 0 2019 106 0 0 chr10 108425438 108425722 -37163566 - AluSq SINE Alu -29 284 1 51 51 0 0 chr10 108426041 108426120 -37163168 + AT_rich Low_complexity Low_complexity 1 79 0 391 316 70 44 chr10 108426153 108426381 -37162907 - L2 LINE L2 -192 3080 2847 230 267 33 0 chr10 108426375 108426435 -37162853 + MIR SINE MIR 13 74 -188 * 2134 69 21 7 chr10 108426447 108426735 -37162553 + L1MA5A LINE L1 6003 6294 -3 389 348 21 32 chr10 108426777 108426964 -37162324 - L2 LINE L2 -498 2816 2632 1061 228 26 21 chr10 108427781 108428014 -37161274 + MIR SINE MIR 29 262 0 525 291 182 27 chr10 108428015 108428511 -37160777 - L2 LINE L2 -50 3263 2693 243 311 56 11 chr10 108428811 108428901 -37160387 - L3 LINE CR1 -464 1113 1020 315 0 0 0 chr10 108429336 108429371 -37159917 + (CA)n Simple_repeat Simple_repeat 2 36 0 2160 123 0 3 chr10 108429558 108429858 -37159430 + AluSx SINE Alu 1 299 -13 299 300 55 18 chr10 108429905 108430015 -37159273 + MER5A DNA MER1_type 7 120 -69 270 0 0 0 chr10 108430179 108430209 -37159079 + (CAA)n Simple_repeat Simple_repeat 1 30 0 181 170 0 170 chr10 108430210 108430263 -37159025 + MER5A DNA MER1_type 146 189 0 496 282 35 6 chr10 108430969 108431139 -37158149 + L1MB7 LINE L1 5370 5544 -620 1136 248 62 46 chr10 108431157 108431661 -37157627 + L1MB7 LINE L1 5607 6128 -40 1257 167 111 62 chr10 108431661 108431949 -37157339 + AluJo SINE Alu 1 302 -10 1136 248 62 46 chr10 108431949 108431991 -37157297 + L1MB7 LINE L1 6128 6168 0 2159 109 3 16 chr10 108432357 108432660 -37156628 + AluSx SINE Alu 1 299 -13 491 241 44 22 chr10 108432764 108432901 -37156387 + MIR SINE MIR 65 204 -58 223 314 88 58 chr10 108432966 108433103 -37156185 + MIR SINE MIR 29 169 -93 192 235 0 0 chr10 108433088 108433122 -37156166 + L2 LINE L2 3223 3256 -16 * 2228 108 7 0 chr10 108433126 108433423 -37155865 + AluSx SINE Alu 1 299 -13 326 314 141 0 chr10 108433686 108433807 -37155481 + L2 LINE L2 3134 3271 -1 252 256 64 0 chr10 108434176 108434254 -37155034 - MIR SINE MIR -64 144 62 287 212 61 10 chr10 108434495 108434594 -37154694 + L1ME4a LINE L1 5951 6054 -67 232 140 60 0 chr10 108434754 108434804 -37154484 + MIR SINE MIR 127 179 -83 2415 97 3 0 chr10 108435022 108435331 -37153957 + AluSx SINE Alu 1 310 -2 21 0 0 31 chr10 108435592 108435610 -37153678 + AT_rich Low_complexity Low_complexity 1 19 -12 1523 181 0 26 chr10 108435610 108435881 -37153407 - AluJo SINE Alu -24 288 25 21 0 0 31 chr10 108435881 108435894 -37153394 + AT_rich Low_complexity Low_complexity 19 31 0 1978 196 45 22 chr10 108435914 108436404 -37152884 + L1ME1 LINE L1 5641 6141 -25 437 197 408 0 chr10 108436489 108436636 -37152652 + L1MD2 LINE L1 6047 6253 -106 2314 76 0 23 chr10 108436637 108436938 -37152350 + AluSq SINE Alu 2 295 -18 2241 102 0 0 chr10 108436957 108437264 -37152024 + AluSx SINE Alu 1 307 0 598 248 40 25 chr10 108437274 108437492 -37151796 - L1MC4a LINE L1 -157 5964 5742 192 125 0 0 chr10 108438026 108438058 -37151230 + (CGG)n Simple_repeat Simple_repeat 2 33 0 21 0 0 0 chr10 108438123 108438144 -37151144 + GC_rich Low_complexity Low_complexity 1 21 0 419 324 96 20 chr10 108439894 108440144 -37149144 - L3 LINE CR1 -21 1556 1288 685 203 90 0 chr10 108440222 108440355 -37148933 + FRAM SINE Alu 1 145 -31 869 252 129 53 chr10 108440498 108440947 -37148341 + MARNA DNA Mariner 61 543 -43 580 188 0 0 chr10 108441079 108441180 -37148108 + FRAM SINE Alu 74 174 -2 201 74 0 0 chr10 108441180 108441207 -37148081 + (GGGA)n Simple_repeat Simple_repeat 1 27 0 1462 134 4 72 chr10 108441597 108441874 -37147414 - MLT1B LTR MaLR -40 350 93 2196 114 0 0 chr10 108441979 108442281 -37147007 - AluSx SINE Alu 0 302 1 207 253 11 55 chr10 108442397 108442488 -37146800 + L2 LINE L2 3186 3272 0 610 225 150 6 chr10 108442645 108442805 -37146483 + MER5A DNA MER1_type 7 189 0 2289 111 7 0 chr10 108443007 108443314 -37145974 + AluSx SINE Alu 1 309 -3 395 319 93 7 chr10 108443446 108443664 -37145624 - MIR SINE MIR -12 250 16 323 288 64 16 chr10 108444000 108444125 -37145163 + L2 LINE L2 3139 3269 -3 1187 219 104 57 chr10 108444331 108444697 -37144591 - MLT1B LTR MaLR -7 383 1 688 168 0 76 chr10 108444754 108444885 -37144403 + Tigger3(Golem) DNA MER2_type 22 142 -2887 1564 147 0 4 chr10 108444891 108445129 -37144159 + Tigger3(Golem) DNA MER2_type 2790 3026 -3 235 316 13 0 chr10 108445216 108445295 -37143993 - L2 LINE L2 -69 3244 3165 1778 124 102 4 chr10 108445321 108445587 -37143701 + AluSx SINE Alu 1 292 -20 386 253 99 6 chr10 108445619 108445781 -37143507 + MIR SINE MIR 86 262 0 357 350 94 42 chr10 108445814 108446438 -37142850 + L2 LINE L2 2616 3272 0 189 295 133 48 chr10 108446610 108446715 -37142573 - L2 LINE L2 -16 3297 3184 2038 102 64 3 chr10 108446932 108447215 -37142073 - AluSx SINE Alu -12 300 1 459 220 0 0 chr10 108447875 108447966 -37141322 - L2 LINE L2 0 3272 3182 2020 144 43 12 chr10 108448029 108448356 -37140932 + MER1B DNA MER1_type 1 337 0 244 230 54 0 chr10 108448977 108449051 -37140237 - L3b LINE CR1 -182 1401 1324 634 167 25 12 chr10 108449332 108449494 -37139794 + CT-rich Low_complexity Low_complexity 1 164 0 333 62 0 0 chr10 108449501 108449549 -37139739 + (CCTG)n Simple_repeat Simple_repeat 1 48 0 642 301 62 48 chr10 108449549 108449885 -37139403 - L2 LINE L2 -22 3250 2910 318 318 19 0 chr10 108450187 108450294 -37138994 - L2 LINE L2 -253 3060 2952 180 255 21 0 chr10 108450780 108450827 -37138461 + L2 LINE L2 3264 3311 -2 180 0 0 0 chr10 108451310 108451330 -37137958 + (CAA)n Simple_repeat Simple_repeat 2 21 0 328 246 7 21 chr10 108451526 108451589 -37137699 - MIR3 SINE MIR 0 208 145 2415 83 10 13 chr10 108451589 108451902 -37137386 - AluSq SINE Alu 0 313 2 328 246 7 21 chr10 108451902 108451947 -37137341 - MIR3 SINE MIR -63 145 101 257 289 145 5 chr10 108452065 108452209 -37137079 - MIR SINE MIR -62 146 37 241 359 28 9 chr10 108452232 108452338 -37136950 + MIR SINE MIR 23 130 -78 1786 95 0 32 chr10 108452342 108452623 -37136665 - AluSx SINE Alu 0 309 37 2280 106 3 0 chr10 108452792 108453085 -37136203 + AluSx SINE Alu 1 294 -18 431 339 51 6 chr10 108453777 108453954 -37135334 + MIR SINE MIR 20 204 -58 29 47 0 0 chr10 108454566 108454609 -37134679 + AT_rich Low_complexity Low_complexity 1 43 0 692 124 53 9 chr10 108454609 108454722 -37134566 - FLAM_C SINE Alu -17 126 9 191 163 0 23 chr10 108455094 108455137 -37134151 + L2 LINE L2 2060 2101 -1213 * 315 231 51 0 chr10 108455135 108455213 -37134075 + L2 LINE L2 3188 3269 -3 600 218 262 4 chr10 108455216 108455445 -37133843 + L2 LINE L2 2098 2385 -929 1406 141 0 10 chr10 108455445 108455651 -37133637 - AluJo SINE Alu -108 204 1 1624 113 98 4 chr10 108455676 108455942 -37133346 + L1PA13 LINE L1 5873 6163 0 796 257 38 101 chr10 108455944 108455980 -37133308 + L2 LINE L2 2676 2713 -600 2262 107 0 7 chr10 108455980 108456289 -37132999 + AluSg1 SINE Alu 1 307 -2 796 257 38 101 chr10 108456289 108456318 -37132970 + L2 LINE L2 2713 2742 -571 207 0 0 0 chr10 108456318 108456341 -37132947 + (CA)n Simple_repeat Simple_repeat 2 24 0 796 257 38 101 chr10 108456341 108456792 -37132496 + L2 LINE L2 2742 3126 -187 1679 186 7 10 chr10 108456792 108457087 -37132201 - AluJo SINE Alu -18 294 1 796 257 38 101 chr10 108457087 108457263 -37132025 + L2 LINE L2 3126 3312 -1 1706 177 42 0 chr10 108457511 108457632 -37131656 + AluJb SINE Alu 1 115 -197 258 32 0 0 chr10 108457632 108457663 -37131625 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1706 177 42 0 chr10 108457663 108457829 -37131459 + AluJb SINE Alu 115 300 -12 758 220 107 0 chr10 108457947 108458106 -37131182 + MER5B DNA MER1_type 1 176 -2 422 280 159 6 chr10 108458229 108458386 -37130902 - MER5A DNA MER1_type -6 183 3 710 215 0 73 chr10 108458396 108458460 -37130828 - MER5A DNA MER1_type 0 189 122 2380 92 0 3 chr10 108458460 108458766 -37130522 + AluSc SINE Alu 1 305 -4 710 215 0 73 chr10 108458766 108458892 -37130396 - MER5A DNA MER1_type -67 122 13 1396 73 28 0 chr10 108459379 108459558 -37129730 - L1PA10 LINE L1 -1 6167 5984 1284 157 14 0 chr10 108459558 108459774 -37129514 - MER20 DNA MER1_type 0 219 1 2138 151 40 10 chr10 108460695 108461099 -37128189 - L1MB7 LINE L1 0 6184 5769 2081 158 102 2 chr10 108461104 108461820 -37127468 - L1MB7 LINE L1 -485 5693 4904 523 150 110 16 chr10 108461827 108461954 -37127334 - L1M LINE L1 -777 5401 5263 206 289 7 84 chr10 108461962 108462104 -37127184 - L2 LINE L2 -37 3276 3146 2079 40 4 0 chr10 108463926 108464175 -37125113 + L1PA4 LINE L1 5902 6151 -4 671 231 106 0 chr10 108464400 108464608 -37124680 + MIR SINE MIR 33 262 0 180 276 41 73 chr10 108464676 108464732 -37124556 - MIR SINE MIR -55 207 151 1873 146 120 120 chr10 108464732 108464915 -37124373 - MLT1G LTR MaLR 0 590 408 2112 83 0 73 chr10 108464915 108465385 -37123903 + AluSc SINE Alu 1 448 0 1873 146 120 120 chr10 108465385 108465790 -37123498 - MLT1G LTR MaLR -181 409 1 180 276 41 73 chr10 108465790 108465856 -37123432 - MIR SINE MIR -111 151 89 1526 112 9 35 chr10 108467544 108467776 -37121512 + AluJb SINE Alu 87 312 0 183 42 0 0 chr10 108468665 108468689 -37120599 + (A)n Simple_repeat Simple_repeat 1 24 0 439 248 9 9 chr10 108469725 108469838 -37119450 + MER5B DNA MER1_type 66 178 0 232 273 15 0 chr10 108470267 108470333 -37118955 - L2 LINE L2 -1 3312 3246 357 306 126 16 chr10 108471458 108471641 -37117647 - L3 LINE CR1 -112 1465 1263 350 327 48 12 chr10 108472230 108472395 -37116893 + MIR SINE MIR 53 223 -39 2472 97 0 0 chr10 108472475 108472784 -37116504 - AluSg SINE Alu -1 309 1 261 305 21 21 chr10 108473317 108473412 -37115876 + MIR SINE MIR 50 144 -118 205 264 176 11 chr10 108474635 108474726 -37114562 - MIR SINE MIR -65 143 38 2173 125 0 0 chr10 108475243 108475532 -37113756 + AluSc SINE Alu 1 289 -20 3320 114 49 7 chr10 108482306 108482658 -37106630 - L1PB4 LINE L1 0 6156 5764 180 111 0 0 chr10 108482658 108482685 -37106603 + (CA)n Simple_repeat Simple_repeat 2 28 0 3320 114 49 7 chr10 108482685 108482888 -37106400 - L1PB4 LINE L1 -392 5764 5571 747 296 202 25 chr10 108483469 108484256 -37105032 - L2 LINE L2 0 3313 2384 509 211 127 0 chr10 108485073 108485215 -37104073 + MER115 DNA AcHobo 534 693 0 205 155 35 17 chr10 108485707 108485765 -37103523 + CT-rich Low_complexity Low_complexity 2 60 0 208 274 155 0 chr10 108486167 108486251 -37103037 - MIR3 SINE MIR -47 161 65 2338 79 0 3 chr10 108486699 108487003 -37102285 - AluSc SINE Alu -6 303 1 692 258 81 5 chr10 108487382 108487580 -37101708 - MIR SINE MIR -32 230 18 572 284 106 31 chr10 108487916 108488208 -37101080 - L2 LINE L2 -8 3305 2992 235 267 17 0 chr10 108488322 108488382 -37100906 - L2 LINE L2 -501 2813 2753 829 157 0 8 chr10 108488386 108488520 -37100768 - FLAM_C SINE Alu 0 133 1 1095 188 26 0 chr10 108488554 108488746 -37100542 - MLT1A2 LTR MaLR -4 370 174 699 144 0 0 chr10 108488757 108488868 -37100420 - FLAM_C SINE Alu -1 142 32 964 119 7 13 chr10 108488874 108489025 -37100263 - MLT1A2 LTR MaLR -214 151 2 2229 109 0 0 chr10 108489250 108489562 -37099726 + AluSx SINE Alu 1 312 0 2043 115 20 10 chr10 108489872 108490177 -37099111 + AluSq SINE Alu 3 310 -3 2357 80 0 3 chr10 108490201 108490515 -37098773 + AluSq SINE Alu 1 313 0 1806 138 7 20 chr10 108491222 108491518 -37097770 + AluJo SINE Alu 1 292 -20 2038 65 7 81 chr10 108491994 108492302 -37096986 - AluSg SINE Alu -14 296 12 1162 194 69 3 chr10 108492606 108492895 -37096393 + MER33 DNA MER1_type 12 319 -5 26 0 0 0 chr10 108493078 108493104 -37096184 + AT_rich Low_complexity Low_complexity 1 26 0 446 280 53 23 chr10 108493287 108493419 -37095869 - L3 LINE CR1 -72 1505 1370 1671 133 61 17 chr10 108493525 108493818 -37095470 + AluSx SINE Alu 1 306 -6 243 241 0 17 chr10 108494488 108494546 -37094742 - MIR SINE MIR -107 101 45 1023 187 39 0 chr10 108495007 108495189 -37094099 + MER5A DNA MER1_type 1 189 0 230 211 0 0 chr10 108497189 108497227 -37092061 - L2 LINE L2 -15 3257 3220 460 272 51 104 chr10 108497255 108497512 -37091776 + MIR SINE MIR 23 262 0 213 167 0 0 chr10 108497504 108497540 -37091748 - MIR SINE MIR -107 155 120 * 2275 92 0 3 chr10 108497875 108498181 -37091107 + AluSx SINE Alu 1 305 -7 402 294 8 8 chr10 108498348 108498474 -37090814 - MIR3 SINE MIR -15 193 68 714 220 110 31 chr10 108499361 108499552 -37089736 + MER58A DNA MER1_type 1 206 -18 1676 98 115 35 chr10 108501450 108501736 -37087552 + AluSg1 SINE Alu 1 309 0 23 54 0 0 chr10 108502970 108503007 -37086281 + AT_rich Low_complexity Low_complexity 1 37 0 25 31 0 0 chr10 108503021 108503053 -37086235 + AT_rich Low_complexity Low_complexity 1 32 0 252 259 253 24 chr10 108503798 108503964 -37085324 - MIR SINE MIR 0 262 59 606 183 78 42 chr10 108504277 108504419 -37084869 - MER106B DNA MER1_type -908 151 5 346 299 78 43 chr10 108504667 108504898 -37084390 + L3 LINE CR1 1144 1382 -195 219 297 95 0 chr10 108505018 108505092 -37084196 + L3 LINE CR1 1468 1548 -29 606 233 46 78 chr10 108505561 108505780 -37083508 - MER112 DNA MER1_type -13 247 36 236 138 62 77 chr10 108506158 108506223 -37083065 + Tigger3(Golem) DNA MER2_type 2672 2735 -294 2102 118 0 3 chr10 108507129 108507426 -37081862 + AluSx SINE Alu 1 296 -16 488 238 268 6 chr10 108507524 108507692 -37081596 - MIR SINE MIR -28 234 23 3034 116 103 43 chr10 108507765 108508230 -37081058 + LTR49 LTR ERV1 1 507 -88 1689 169 0 7 chr10 108508230 108508531 -37080757 + AluJo SINE Alu 1 299 -13 3034 116 103 43 chr10 108508531 108508626 -37080662 + LTR49 LTR ERV1 507 595 0 338 265 10 17 chr10 108508988 108509105 -37080183 + L1MC5 LINE L1 7833 8032 -10 1643 169 30 0 chr10 108509105 108509400 -37079888 + AluJb SINE Alu 1 304 -8 2238 108 0 0 chr10 108509400 108509697 -37079591 + AluSx SINE Alu 1 297 -15 1086 89 0 0 chr10 108510280 108510426 -37078862 + AluSg/x SINE Alu 155 300 -12 2242 90 0 3 chr10 108510691 108510991 -37078297 - AluY SINE Alu -12 299 1 186 254 159 16 chr10 108512182 108512245 -37077043 - MIR SINE MIR -94 168 97 539 316 88 32 chr10 108513334 108513708 -37075580 + L2 LINE L2 2463 2857 -457 300 324 105 0 chr10 108513970 108514075 -37075213 + L2 LINE L2 3182 3297 -16 379 237 158 66 chr10 108514241 108514404 -37074884 + L1ME4a LINE L1 5777 5924 -197 351 0 0 0 chr10 108514404 108514443 -37074845 + (CA)n Simple_repeat Simple_repeat 2 40 0 379 237 158 66 chr10 108514443 108514583 -37074705 + L1ME4a LINE L1 5924 6108 -13 842 236 19 5 chr10 108515803 108516015 -37073273 - MIR SINE MIR -16 246 32 207 0 0 0 chr10 108516066 108516089 -37073199 + (TG)n Simple_repeat Simple_repeat 1 23 0 2124 100 7 3 chr10 108516316 108516615 -37072673 - AluSg SINE Alu -10 300 1 243 0 0 0 chr10 108516667 108516694 -37072594 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2167 70 0 0 chr10 108516694 108516967 -37072321 - L1PA8 LINE L1 -17 6155 5883 289 213 191 14 chr10 108516979 108517120 -37072168 - MIR SINE MIR -50 212 47 2097 108 0 7 chr10 108517318 108517613 -37071675 + AluSx SINE Alu 1 293 -19 507 173 10 153 chr10 108517798 108518000 -37071288 + L1MC5 LINE L1 7753 7925 -36 2252 103 0 0 chr10 108518004 108518314 -37070974 - AluSg SINE Alu 0 310 1 403 295 191 21 chr10 108518324 108518612 -37070676 + L1 LINE L1 3584 3920 -2226 213 299 60 15 chr10 108519944 108520011 -37069277 + L2 LINE L2 3243 3312 -1 312 330 9 9 chr10 108520223 108520338 -37068950 + L3 LINE CR1 1135 1249 -328 606 271 85 85 chr10 108520378 108520684 -37068604 + L2 LINE L2 3008 3313 0 328 335 44 54 chr10 108520912 108521363 -37067925 - L2 LINE L2 -225 3047 2606 39363 42 9 1 chr10 108521402 108526946 -37062342 + L1PA5 LINE L1 562 6153 -1 2015 147 0 3 chr10 108527374 108527686 -37061602 - AluJb SINE Alu -1 311 1 379 178 23 224 chr10 108528445 108528664 -37060624 - MER5B DNA MER1_type -3 175 1 230 217 0 0 chr10 108528899 108528945 -37060343 - MIR3 SINE MIR -7 201 156 348 228 99 30 chr10 108529153 108529254 -37060034 - MIR3 SINE MIR -89 119 12 363 302 73 0 chr10 108529826 108529922 -37059366 - L2 LINE L2 -18 3254 3152 197 322 81 0 chr10 108530655 108530742 -37058546 - L3 LINE CR1 -709 868 775 227 125 0 71 chr10 108530867 108530923 -37058365 + MSTA-int LTR MaLR 1528 1579 -1 1794 137 207 8 chr10 108530924 108531281 -37058007 + MSTA LTR MaLR 1 428 0 230 277 0 0 chr10 108531281 108531346 -37057942 - L1ME4a LINE L1 -93 6028 5964 1950 230 129 39 chr10 108531482 108532309 -37056979 - L1MC4a LINE L1 -381 5740 5265 329 164 328 35 chr10 108532327 108532443 -37056845 - L3 LINE CR1 -813 764 615 1778 155 0 23 chr10 108532535 108532839 -37056449 - AluJo SINE Alu -15 297 1 734 287 137 3 chr10 108532954 108533313 -37055975 - MARNA DNA Mariner -56 530 124 322 289 115 36 chr10 108533858 108534149 -37055139 - L2 LINE L2 0 3272 2892 388 329 28 102 chr10 108534238 108534700 -37054588 - L2 LINE L2 -556 2758 2331 351 352 44 0 chr10 108534791 108534973 -37054315 - MIR SINE MIR 0 262 73 210 234 31 0 chr10 108536013 108536077 -37053211 - MIR SINE MIR -53 209 144 2446 46 0 3 chr10 108536141 108536452 -37052836 - AluY SINE Alu 0 310 1 290 299 118 21 chr10 108536455 108536599 -37052689 - MIR3 SINE MIR -14 194 37 426 301 45 6 chr10 108536651 108536827 -37052461 + MIR SINE MIR 22 204 -58 279 237 93 21 chr10 108537093 108537190 -37052098 - MIR SINE MIR 0 262 159 2385 110 0 0 chr10 108537230 108537540 -37051748 - AluSx SINE Alu -1 311 2 422 143 0 26 chr10 108537787 108537864 -37051424 - L1MC5 LINE L1 -48 7913 7839 2313 78 3 0 chr10 108537937 108538231 -37051057 - AluY SINE Alu -16 295 1 228 344 55 16 chr10 108539050 108539178 -37050110 + MIR SINE MIR 19 151 -57 24 0 0 0 chr10 108539545 108539569 -37049719 + GC_rich Low_complexity Low_complexity 1 24 0 557 263 110 18 chr10 108540514 108540742 -37048546 + MIR SINE MIR 14 262 0 5632 92 17 10 chr10 108540786 108541595 -37047693 - L1PA15 LINE L1 0 6165 5351 1599 167 74 0 chr10 108542857 108543126 -37046162 - AluSx SINE Alu -23 289 1 469 133 63 5 chr10 108543827 108543955 -37045333 + MIR SINE MIR 1 197 -65 292 315 11 0 chr10 108544126 108544218 -37045070 + MIR SINE MIR 46 138 -124 22 0 0 0 chr10 108544520 108544542 -37044746 + AT_rich Low_complexity Low_complexity 1 22 0 258 264 234 12 chr10 108545951 108546118 -37043170 + MIR SINE MIR 49 252 -10 558 132 58 16 chr10 108546369 108546490 -37042798 - L1MB2 LINE L1 0 6171 6046 2007 139 0 3 chr10 108546495 108546790 -37042498 - AluSx SINE Alu -18 294 1 420 311 50 27 chr10 108547652 108547874 -37041414 + L1MC/D LINE L1 5510 5736 -2072 2151 107 7 3 chr10 108648353 108648661 -36940627 + AluSg SINE Alu 1 309 -1 194 388 35 0 chr10 108649318 108649434 -36939854 - MIR SINE MIR -14 248 129 1593 185 27 3 chr10 108649601 108649893 -36939395 - AluJb SINE Alu -13 299 1 1305 186 8 0 chr10 108650078 108650314 -36938974 - AluSx SINE Alu -18 294 57 1731 88 4 0 chr10 108650414 108650640 -36938648 - AluSg SINE Alu -45 265 39 456 309 135 20 chr10 108650640 108650989 -36938299 + L2 LINE L2 2925 3313 0 461 147 39 0 chr10 108651065 108651169 -36938119 - MER5A DNA MER1_type -77 112 4 591 104 0 0 chr10 108651186 108651291 -36937997 + AluSp/q SINE Alu 210 314 0 379 197 8 126 chr10 108651291 108651418 -36937870 + MER5B DNA MER1_type 59 170 -8 349 258 32 97 chr10 108651461 108651647 -36937641 - MIR SINE MIR -71 191 18 26 50 0 0 chr10 108652115 108652155 -36937133 + AT_rich Low_complexity Low_complexity 1 40 0 273 266 8 31 chr10 108652203 108652331 -36936957 - MER113 DNA MER1_type? -365 156 32 2626 81 53 0 chr10 108653230 108653588 -36935700 - MER51B LTR ERV1 0 377 1 790 207 49 44 chr10 108653653 108653714 -36935574 - MIR SINE MIR -3 259 200 1784 160 3 0 chr10 108653714 108654002 -36935286 + AluJo SINE Alu 4 292 -20 790 207 49 44 chr10 108654002 108654143 -36935145 - MIR SINE MIR -62 200 56 482 260 186 11 chr10 108654240 108654417 -36934871 + MIR SINE MIR 37 244 -18 1383 161 13 68 chr10 108655015 108655164 -36934124 - AluJo SINE Alu 0 312 156 2497 48 0 3 chr10 108655164 108655474 -36933814 - AluY SINE Alu -2 309 1 1383 161 13 68 chr10 108655474 108655528 -36933760 - AluJo SINE Alu -156 156 101 2251 84 0 3 chr10 108655528 108655824 -36933464 - AluSx SINE Alu -17 295 1 1383 161 13 68 chr10 108655824 108655952 -36933336 - AluJo SINE Alu -211 101 17 954 190 0 6 chr10 108656133 108656312 -36932976 + AluJb SINE Alu 133 310 -2 1571 202 71 41 chr10 108656660 108656890 -36932398 - Charlie4a DNA MER1_type -1485 476 254 2037 110 10 0 chr10 108656890 108657190 -36932098 - AluSp SINE Alu -9 304 2 1571 202 71 41 chr10 108657190 108657395 -36931893 - Charlie4a DNA MER1_type -1707 254 28 2130 88 3 3 chr10 108658330 108658626 -36930662 - AluSx SINE Alu -16 296 1 304 292 34 0 chr10 108658679 108658768 -36930520 - MER81 DNA DNA -4 110 19 291 196 0 0 chr10 108658771 108658822 -36930466 - MER81 DNA DNA -63 51 1 2398 65 0 7 chr10 108658910 108659216 -36930072 - AluY SINE Alu -7 304 1 27 73 0 0 chr10 108659313 108659368 -36929920 + AT_rich Low_complexity Low_complexity 1 55 0 425 254 8 31 chr10 108659445 108659575 -36929713 - LTR67 LTR ERVL -19 538 412 1023 226 5 0 chr10 108659604 108659803 -36929485 - MER58A DNA MER1_type -12 212 13 288 0 0 0 chr10 108659901 108659933 -36929355 + (TG)n Simple_repeat Simple_repeat 1 32 0 5189 81 25 30 chr10 108659964 108660006 -36929282 - L1MA2 LINE L1 -4 6300 6259 270 56 0 0 chr10 108660006 108660042 -36929246 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 1922 127 7 0 chr10 108660043 108660327 -36928961 - AluSx SINE Alu -26 286 1 5189 81 25 30 chr10 108660327 108660727 -36928561 - L1MA2 LINE L1 -45 6259 5859 1737 112 33 26 chr10 108660727 108661031 -36928257 + AluSx SINE Alu 5 310 -2 5189 81 25 30 chr10 108661031 108661354 -36927934 - L1MA2 LINE L1 -445 5859 5536 332 148 115 0 chr10 108661843 108661904 -36927384 + tRNA-Glu-GAG tRNA tRNA 5 72 -3 249 369 39 10 chr10 108662076 108662179 -36927109 - MIR SINE MIR -87 121 16 330 26 0 0 chr10 108662484 108662523 -36926765 + (TG)n Simple_repeat Simple_repeat 2 40 0 2109 119 3 0 chr10 108662894 108663196 -36926092 - AluSp SINE Alu -10 303 1 363 221 200 0 chr10 108663237 108663332 -36925956 + MER81 DNA DNA 1 114 0 758 249 78 18 chr10 108663356 108663573 -36925715 - MIR SINE MIR -26 236 7 816 266 141 49 chr10 108663754 108664126 -36925162 + L1MC4a LINE L1 4807 5143 -1003 2144 101 7 3 chr10 108664126 108664433 -36924855 + AluSg1 SINE Alu 1 308 -1 816 266 141 49 chr10 108664433 108664659 -36924629 + L1MC4a LINE L1 5143 5347 -799 1662 199 7 0 chr10 108664659 108664966 -36924322 + AluJb SINE Alu 1 309 -3 816 266 141 49 chr10 108664966 108665264 -36924024 + L1MC4a LINE L1 5347 5202 -944 186 103 0 0 chr10 108665264 108665293 -36923995 + (AGTAG)n Simple_repeat Simple_repeat 2 30 0 816 266 141 49 chr10 108665293 108665413 -36923875 + L1MC4a LINE L1 5201 5309 -837 811 188 0 0 chr10 108665430 108665563 -36923725 + AluJb SINE Alu 168 300 -12 705 242 106 0 chr10 108665700 108665861 -36923427 + MER45A DNA AcHobo 1 178 0 2314 78 13 0 chr10 108665926 108666234 -36923054 - AluSq SINE Alu -1 312 1 1979 112 7 26 chr10 108666492 108666796 -36922492 + AluSx SINE Alu 3 300 -12 22 35 0 0 chr10 108667054 108667083 -36922205 + AT_rich Low_complexity Low_complexity 1 29 0 1198 167 0 19 chr10 108667833 108667957 -36921331 - AluJo SINE Alu -22 290 170 2186 126 32 29 chr10 108667957 108668331 -36920957 + THE1C LTR MaLR 1 375 0 1198 167 0 19 chr10 108668331 108668416 -36920872 - AluJo SINE Alu -142 170 85 1616 148 20 36 chr10 108668440 108668745 -36920543 + AluJo SINE Alu 1 300 -12 534 246 66 38 chr10 108668882 108669065 -36920223 - MIR SINE MIR -50 212 25 322 295 98 18 chr10 108669099 108669211 -36920077 + MER5A DNA MER1_type 18 138 -51 4034 150 8 51 chr10 108669239 108669506 -36919782 - L1MB3 LINE L1 -8 6175 5898 1480 186 26 20 chr10 108669506 108669812 -36919476 + AluJo SINE Alu 1 308 -4 4034 150 8 51 chr10 108669812 108670310 -36918978 - L1MB3 LINE L1 -285 5898 5443 340 260 0 0 chr10 108671325 108671398 -36917890 - MIR SINE MIR -105 157 85 1095 161 18 51 chr10 108671533 108671555 -36917733 + L1MB7 LINE L1 5925 5946 -237 1735 151 6 25 chr10 108671555 108671873 -36917415 + AluJo SINE Alu 1 312 0 1095 161 18 51 chr10 108671873 108671979 -36917309 + L1MB7 LINE L1 5946 6054 -129 1582 174 37 10 chr10 108671979 108672278 -36917010 + AluJb SINE Alu 1 307 -5 1095 161 18 51 chr10 108672278 108672399 -36916889 + L1MB7 LINE L1 6054 6174 -9 472 325 64 8 chr10 108672673 108672922 -36916366 + L3 LINE CR1 1233 1495 -82 1911 135 0 0 chr10 108673196 108673505 -36915783 - AluSx SINE Alu 0 309 1 544 263 54 75 chr10 108673534 108673684 -36915604 + MIR SINE MIR 2 147 -115 2089 102 40 7 chr10 108673684 108673987 -36915301 + AluSq SINE Alu 1 313 0 544 263 54 75 chr10 108673987 108674076 -36915212 + MIR SINE MIR 147 236 -26 2054 110 10 0 chr10 108674595 108674896 -36914392 - AluY SINE Alu -7 304 1 1781 169 3 0 chr10 108674898 108675188 -36914100 - AluJo SINE Alu -21 291 1 547 262 111 0 chr10 108675560 108675732 -36913556 - MIR SINE MIR -7 255 65 396 309 163 31 chr10 108676757 108677077 -36912211 + L2 LINE L2 2426 2787 -527 493 300 36 54 chr10 108677090 108677313 -36911975 - L2 LINE L2 -6 3307 3089 271 44 44 0 chr10 108677336 108677381 -36911907 + (GA)n Simple_repeat Simple_repeat 1 47 0 524 304 93 63 chr10 108677493 108677758 -36911530 - L2 LINE L2 -397 2917 2661 2319 163 3 3 chr10 108677758 108678145 -36911143 + MLT1B LTR MaLR 3 389 -1 524 304 93 63 chr10 108678145 108678172 -36911116 - L2 LINE L2 -653 2661 2636 1974 114 45 0 chr10 108678172 108678461 -36910827 + AluSg SINE Alu 1 302 -8 524 304 93 63 chr10 108678461 108678703 -36910585 - L2 LINE L2 -678 2636 2366 312 169 65 0 chr10 108678809 108678886 -36910402 - L1MC2 LINE L1 0 6344 6263 1617 177 7 7 chr10 108678902 108679207 -36910081 - AluJb SINE Alu -7 305 1 2161 139 34 0 chr10 108679277 108679659 -36909629 - L1MA8 LINE L1 -5 6286 5892 414 287 102 78 chr10 108679867 108680160 -36909128 + L2 LINE L2 2968 3267 -5 289 306 0 0 chr10 108680725 108680797 -36908491 + MIR SINE MIR 50 121 -87 2037 100 7 3 chr10 108681177 108681466 -36907822 - AluSq SINE Alu -15 298 9 22 0 0 0 chr10 108681524 108681546 -36907742 + AT_rich Low_complexity Low_complexity 1 22 0 2120 118 3 0 chr10 108681546 108681850 -36907438 + AluSx SINE Alu 1 305 -7 314 361 24 0 chr10 108681865 108682034 -36907254 + GA-rich Low_complexity Low_complexity 3 175 0 1728 183 0 3 chr10 108682082 108682388 -36906900 + AluJb SINE Alu 1 305 -7 370 362 151 0 chr10 108682757 108682909 -36906379 + MER91A DNA MER1_type 1 175 -21 355 219 42 67 chr10 108683089 108683208 -36906080 - MIR SINE MIR -75 187 72 448 129 47 47 chr10 108683819 108683904 -36905384 + MIR SINE MIR 61 145 -117 249 244 33 56 chr10 108684232 108684322 -36904966 - L2 LINE L2 -62 3251 3164 1744 165 3 3 chr10 108684328 108684619 -36904669 - AluJb SINE Alu -13 299 9 321 358 46 12 chr10 108685042 108685215 -36904073 + MIR SINE MIR 17 195 -67 260 172 0 16 chr10 108686153 108686217 -36903071 + CT-rich Low_complexity Low_complexity 2 64 0 1618 151 44 4 chr10 108686217 108686488 -36902800 - AluJb SINE Alu -30 282 1 507 294 113 5 chr10 108686781 108686975 -36902313 + L3 LINE CR1 1178 1392 -185 204 408 10 0 chr10 108687141 108687239 -36902049 - L3 LINE CR1 -7 1570 1472 500 222 188 0 chr10 108687899 108688025 -36901263 + MIR SINE MIR 67 225 -37 456 19 0 0 chr10 108688025 108688078 -36901210 + (CA)n Simple_repeat Simple_repeat 2 54 0 500 222 188 0 chr10 108688078 108688095 -36901193 + MIR SINE MIR 224 237 -25 1957 111 9 84 chr10 108688168 108688502 -36900786 - AluSx SINE Alu -3 309 1 1778 169 7 17 chr10 108688504 108688799 -36900489 - AluJo SINE Alu -20 292 1 597 202 103 67 chr10 108689263 108689422 -36899866 + L1ME3A LINE L1 5455 5626 -544 2632 63 0 13 chr10 108689422 108689738 -36899550 + AluSx SINE Alu 1 312 0 597 202 103 67 chr10 108689738 108689801 -36899487 + L1ME3A LINE L1 5626 5685 -485 1138 154 10 5 chr10 108689809 108690010 -36899278 - MER3 DNA MER1_type 0 209 8 1812 213 58 20 chr10 108690024 108690474 -36898814 + L1ME3A LINE L1 5699 6165 -5 23 0 0 0 chr10 108691114 108691137 -36898151 + GC_rich Low_complexity Low_complexity 1 23 0 465 308 20 7 chr10 108691664 108691810 -36897478 - MIR SINE MIR -102 160 13 226 312 58 71 chr10 108691945 108692099 -36897189 - MIR3 SINE MIR -24 184 33 253 327 10 10 chr10 108693289 108693393 -36895895 - L2 LINE L2 -252 3020 2917 219 251 220 94 chr10 108693422 108693677 -36895611 + L2 LINE L2 3005 3291 -22 195 42 0 0 chr10 108693685 108693709 -36895579 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 251 203 0 34 chr10 108694084 108694143 -36895145 + CT-rich Low_complexity Low_complexity 1 57 0 265 243 144 27 chr10 108697449 108697560 -36891728 + L2 LINE L2 3117 3240 -32 387 279 153 32 chr10 108697586 108697776 -36891512 + MIR SINE MIR 39 251 -11 234 91 0 0 chr10 108700630 108700663 -36888625 + (TGG)n Simple_repeat Simple_repeat 1 33 0 360 167 14 0 chr10 108701474 108701546 -36887742 + MER53 DNA DNA 89 161 -28 1269 163 29 14 chr10 108701546 108701755 -36887533 + AluJo SINE Alu 83 294 -18 330 115 0 0 chr10 108701755 108701807 -36887481 + (GA)n Simple_repeat Simple_repeat 1 52 0 2422 68 7 0 chr10 108701814 108702107 -36887181 - AluSp SINE Alu -18 295 1 491 278 52 23 chr10 108702845 108703018 -36886270 - MIR3 SINE MIR -14 194 17 479 286 48 0 chr10 108703145 108703271 -36886017 - MIR SINE MIR -96 166 35 299 223 148 14 chr10 108703477 108703572 -36885716 - MIR SINE MIR -74 134 29 288 53 0 0 chr10 108704025 108704063 -36885225 + (TCCC)n Simple_repeat Simple_repeat 1 38 0 505 184 0 10 chr10 108704644 108704747 -36884541 + L1MC4 LINE L1 7940 8041 -1 291 308 39 0 chr10 108704831 108704935 -36884353 + MIR SINE MIR 8 115 -147 410 105 0 0 chr10 108704952 108705009 -36884279 - AluSg/x SINE Alu -169 140 84 1894 122 19 4 chr10 108705009 108705153 -36884135 - AluSx SINE Alu -38 274 123 369 0 0 0 chr10 108705153 108705194 -36884094 + (TG)n Simple_repeat Simple_repeat 2 42 0 1894 122 19 4 chr10 108705194 108705319 -36883969 - AluSx SINE Alu -189 123 1 372 269 134 8 chr10 108705320 108705454 -36883834 + MIR SINE MIR 103 253 -9 282 276 39 71 chr10 108705753 108705880 -36883408 - L2 LINE L2 0 3313 3191 1693 164 49 28 chr10 108706449 108706736 -36882552 - AluJo SINE Alu -19 293 1 189 0 0 0 chr10 108707123 108707144 -36882144 + (TG)n Simple_repeat Simple_repeat 2 22 0 686 278 147 23 chr10 108707368 108707803 -36881485 + MLT1J LTR MaLR 23 511 0 542 289 31 27 chr10 108708263 108708488 -36880800 - L2 LINE L2 -458 2856 2631 676 272 48 56 chr10 108708668 108708879 -36880409 + L1ME4a LINE L1 5548 5756 -365 2140 128 0 10 chr10 108708879 108709184 -36880104 + AluSx SINE Alu 5 306 -6 676 272 48 56 chr10 108709184 108709347 -36879941 + L1ME4a LINE L1 5756 5919 -202 2006 150 0 3 chr10 108709454 108709748 -36879540 + AluJo SINE Alu 1 293 -19 1545 162 9 0 chr10 108709767 108709996 -36879292 + AluSx SINE Alu 57 287 -25 749 139 16 0 chr10 108710099 108710221 -36879067 + AluSq SINE Alu 133 256 -57 493 317 64 15 chr10 108710613 108710878 -36878410 + L3 LINE CR1 1218 1495 -82 1963 111 4 11 chr10 108711152 108711460 -36877828 - AluSc SINE Alu 0 306 1 894 213 0 0 chr10 108711462 108711617 -36877671 - AluJb SINE Alu -21 291 137 41 0 0 0 chr10 108712972 108713013 -36876275 + AT_rich Low_complexity Low_complexity 1 41 0 1591 189 0 3 chr10 108713138 108713439 -36875849 - AluSq SINE Alu -9 304 5 23 0 0 0 chr10 108713575 108713598 -36875690 + AT_rich Low_complexity Low_complexity 1 23 0 2585 56 0 3 chr10 108713723 108714028 -36875260 - AluSq SINE Alu -9 304 1 240 264 0 0 chr10 108714186 108714239 -36875049 + GA-rich Low_complexity Low_complexity 2 54 0 191 226 202 73 chr10 108714258 108714382 -36874906 + MIR3 SINE MIR 21 160 -48 305 284 55 31 chr10 108714387 108714514 -36874774 - MER5A DNA MER1_type -5 184 55 625 280 42 0 chr10 108714544 108714712 -36874576 - FAM SINE Alu 0 175 1 305 263 0 30 chr10 108714737 108714836 -36874452 - AluJ/FLAM SINE Alu -202 100 5 436 213 62 0 chr10 108716803 108716883 -36872405 - AluS SINE Alu -226 86 2 212 215 77 31 chr10 108716887 108716952 -36872336 - MIR SINE MIR -73 189 122 231 301 24 98 chr10 108717725 108717848 -36871440 + MIR SINE MIR 81 194 -68 * 863 269 172 7 chr10 108717846 108718125 -36871163 - L2 LINE L2 -1 3312 2988 1764 168 3 17 chr10 108718125 108718416 -36870872 + AluJb SINE Alu 1 287 -25 2287 102 0 3 chr10 108718426 108718744 -36870544 + AluSg SINE Alu 1 310 0 1998 142 21 0 chr10 108718754 108719036 -36870252 + AluSx SINE Alu 1 288 -24 352 97 32 0 chr10 108719072 108719134 -36870154 - L2 LINE L2 -312 3001 2938 416 295 7 27 chr10 108719508 108719657 -36869631 + MIR SINE MIR 47 192 -70 249 339 16 16 chr10 108719895 108720022 -36869266 - U2 snRNA snRNA -57 131 5 453 275 15 46 chr10 108720752 108720883 -36868405 + MIR SINE MIR 61 187 -75 2481 86 0 6 chr10 108722023 108722336 -36866952 - AluSx SINE Alu -1 311 1 2160 124 3 7 chr10 108722339 108722646 -36866642 - AluSg1 SINE Alu -3 306 1 301 195 0 85 chr10 108723151 108723233 -36866055 + L1MC4a LINE L1 6150 6224 -1584 364 167 28 14 chr10 108723234 108723306 -36865982 + U13 snRNA snRNA 1 73 -31 4663 192 126 78 chr10 108723430 108723663 -36865625 + L1MC4 LINE L1 6366 6586 -1456 210 37 0 0 chr10 108723663 108723690 -36865598 + (TG)n Simple_repeat Simple_repeat 2 28 0 4663 192 126 78 chr10 108723690 108724844 -36864444 + L1MC4 LINE L1 6586 7844 -198 2569 54 3 16 chr10 108724844 108725159 -36864129 - AluY SINE Alu 0 311 1 4663 192 126 78 chr10 108725159 108725369 -36863919 + L1MC4 LINE L1 7844 8042 0 1823 134 24 24 chr10 108725406 108725698 -36863590 - AluSx SINE Alu -20 292 1 2567 51 0 35 chr10 108725710 108726026 -36863262 - AluY SINE Alu -6 305 1 1733 239 65 44 chr10 108726030 108726249 -36863039 + L1ME3 LINE L1 5517 5730 -432 1856 122 44 133 chr10 108726249 108726685 -36862603 + MLT2C1 LTR ERVL 1 397 0 1733 239 65 44 chr10 108726685 108727052 -36862236 + L1ME3 LINE L1 5730 6115 -47 379 192 51 0 chr10 108727430 108727508 -36861780 - MLT2C1 LTR ERVL -315 82 1 498 217 35 9 chr10 108728059 108728174 -36861114 + L3 LINE CR1 1233 1350 -227 238 252 142 50 chr10 108728342 108728560 -36860728 - L1ME4a LINE L1 -129 5992 5755 2271 117 3 0 chr10 108728565 108728864 -36860424 - AluSx SINE Alu -12 300 1 310 299 121 52 chr10 108729071 108729245 -36860043 - L3 LINE CR1 -14 1563 1378 183 200 31 108 chr10 108729992 108730057 -36859231 - L2 LINE L2 0 3313 3254 270 203 78 16 chr10 108730335 108730399 -36858889 + L3 LINE CR1 1235 1302 -275 * 720 295 97 10 chr10 108730387 108730675 -36858613 + L2 LINE L2 2493 2805 -509 776 281 86 64 chr10 108730782 108731095 -36858193 + L2 LINE L2 2951 3270 -2 204 292 101 0 chr10 108731095 108731184 -36858104 + L3 LINE CR1 1309 1406 -171 243 0 0 0 chr10 108731184 108731211 -36858077 + (A)n Simple_repeat Simple_repeat 1 27 0 395 321 103 24 chr10 108731376 108731541 -36857747 + MIR SINE MIR 34 211 -51 214 220 20 20 chr10 108736345 108736395 -36852893 + L2 LINE L2 3223 3272 0 2239 86 20 23 chr10 108736526 108736829 -36852459 + AluSq SINE Alu 1 302 -11 662 284 55 6 chr10 108737665 108737848 -36851440 + MIR SINE MIR 15 206 -56 723 298 69 5 chr10 108738186 108738404 -36850884 + MIR SINE MIR 29 260 -2 509 245 37 61 chr10 108739249 108739412 -36849876 - MARNA DNA Mariner -14 572 414 * 1202 279 40 47 chr10 108739271 108739715 -36849573 + MARNA DNA Mariner 37 477 -109 213 333 10 29 chr10 108740182 108740284 -36849004 - L3 LINE CR1 -855 722 623 386 277 88 73 chr10 108741637 108741965 -36847323 + L1M2 LINE L1 1056 1388 -5461 1651 124 43 77 chr10 108743484 108743783 -36845505 + AluJb SINE Alu 1 289 -23 930 282 110 36 chr10 108744297 108744744 -36844544 - L2 LINE L2 -16 3297 2818 668 240 27 46 chr10 108745047 108745384 -36843904 + MLT1I LTR MaLR 21 395 -14 205 208 333 0 chr10 108745408 108745480 -36843808 - MER5A DNA MER1_type -32 157 62 763 143 9 27 chr10 108745480 108745697 -36843591 + CT-rich Low_complexity Low_complexity 1 213 0 831 143 0 8 chr10 108745718 108745837 -36843451 - FLAM_C SINE Alu -20 123 6 427 159 0 0 chr10 108745839 108745908 -36843380 - MER5A DNA MER1_type -111 78 10 2317 109 0 0 chr10 108745999 108746293 -36842995 + AluSx SINE Alu 1 294 -18 2176 75 215 185 chr10 108746393 108746956 -36842332 - LTR12 LTR ERV1 -134 580 1 869 301 103 33 chr10 108747033 108747462 -36841826 + MLT1J LTR MaLR 44 502 -9 1164 260 137 5 chr10 108747791 108748229 -36841059 + Charlie2b DNA MER1_type 1 496 -2286 29 0 0 0 chr10 108748381 108748410 -36840878 + AT_rich Low_complexity Low_complexity 1 29 0 2010 129 24 0 chr10 108748410 108748705 -36840583 + AluSx SINE Alu 1 302 -10 2824 74 10 33 chr10 108748708 108748858 -36840430 - L1MA1 LINE L1 -6 6296 6144 186 103 0 0 chr10 108748858 108748887 -36840401 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 1830 176 3 3 chr10 108748891 108749187 -36840101 - AluJb SINE Alu -16 296 1 2824 74 10 33 chr10 108749187 108749425 -36839863 - L1MA1 LINE L1 -161 6141 5912 1403 275 48 39 chr10 108749457 108749941 -36839347 + Charlie2b DNA MER1_type 535 1022 -1760 3566 142 51 60 chr10 108749941 108749989 -36839299 + L1MB5 LINE L1 5443 5490 -684 2158 121 14 0 chr10 108749989 108750286 -36839002 + AluSp SINE Alu 1 301 -12 3566 142 51 60 chr10 108750286 108750480 -36838808 + L1MB5 LINE L1 5490 5684 -490 2513 123 103 15 chr10 108750480 108750877 -36838411 + MSTB1 LTR MaLR 1 432 0 3566 142 51 60 chr10 108750877 108751338 -36837950 + L1MB5 LINE L1 5684 6141 -33 873 124 0 29 chr10 108751338 108751475 -36837813 + FLAM_C SINE Alu 1 133 0 228 301 88 59 chr10 108751535 108751577 -36837711 + MER5A DNA MER1_type 28 67 -122 1888 139 3 20 chr10 108751577 108751880 -36837408 - AluSx SINE Alu -14 298 1 228 301 88 59 chr10 108751880 108751973 -36837315 + MER5A DNA MER1_type 67 167 -22 * 346 235 74 0 chr10 108751925 108752006 -36837282 - MER5A DNA MER1_type -102 87 1 340 343 38 106 chr10 108752112 108752404 -36836884 - L2 LINE L2 -18 3254 2983 331 343 45 35 chr10 108752552 108752753 -36836535 - L2 LINE L2 -473 2841 2639 * 421 300 88 6 chr10 108752733 108752893 -36836395 - MIR SINE MIR -85 177 5 25 0 0 0 chr10 108752895 108752920 -36836368 + AT_rich Low_complexity Low_complexity 1 25 0 205 208 83 0 chr10 108753157 108753205 -36836083 + MIR SINE MIR 100 151 -111 1688 155 50 58 chr10 108753226 108753325 -36835963 - MER2 DNA MER2_type -6 339 241 2895 16 0 0 chr10 108753325 108753642 -36835646 - AluYb8 SINE Alu -1 317 1 1688 155 50 58 chr10 108753642 108753884 -36835404 - MER2 DNA MER2_type -104 241 1 201 239 8 128 chr10 108753884 108754001 -36835287 + MIR SINE MIR 160 262 0 1843 103 110 11 chr10 108754860 108755132 -36834156 + AluSx SINE Alu 1 299 -13 507 161 322 0 chr10 108755142 108755285 -36834003 + L1PA16 LINE L1 963 1151 -5712 12061 194 52 22 chr10 108755286 108756847 -36832441 + L1PA16 LINE L1 1297 2809 -4073 2162 111 7 3 chr10 108756847 108757135 -36832153 + AluSc SINE Alu 2 290 -19 12061 194 52 22 chr10 108757135 108760915 -36828373 + L1PA16 LINE L1 2809 6849 -33 26 0 0 0 chr10 108760927 108760953 -36828335 + AT_rich Low_complexity Low_complexity 1 26 0 333 0 0 0 chr10 108761170 108761207 -36828081 + (CA)n Simple_repeat Simple_repeat 2 38 0 212 156 22 22 chr10 108761516 108761561 -36827727 - MIR SINE MIR -2 260 216 984 198 15 2 chr10 108761593 108761867 -36827421 - MLT1F LTR MaLR 0 542 212 301 185 123 0 chr10 108761875 108761956 -36827332 - L1M4 LINE L1 -671 5513 5423 42171 63 6 2 chr10 108762013 108768141 -36821147 - L1PA5 LINE L1 0 6154 2 12176 169 21 11 chr10 108768141 108769455 -36819833 - L1PB4 LINE L1 -21 6135 4836 1701 170 21 3 chr10 108769455 108769744 -36819544 - AluSx SINE Alu -18 294 1 12176 169 21 11 chr10 108769744 108771625 -36817663 - L1PB4 LINE L1 -1320 4836 2906 1375 181 0 9 chr10 108771625 108771852 -36817436 - AluJo SINE Alu -13 299 75 303 393 92 12 chr10 108771995 108772158 -36817130 - L1M2 LINE L1 -6062 787 612 1197 323 60 5 chr10 108772310 108772725 -36816563 - L1M2 LINE L1 -6399 450 13 * 1549 181 30 69 chr10 108772724 108773030 -36816258 - L1MC/D LINE L1 -743 5403 5173 1582 174 53 27 chr10 108773030 108773329 -36815959 - AluJo SINE Alu -5 307 1 1549 181 30 69 chr10 108773329 108773532 -36815756 - L1MC/D LINE L1 -973 5173 4964 426 287 40 34 chr10 108773902 108774110 -36815178 - MLT1K LTR MaLR -357 231 40 2521 208 71 17 chr10 108774500 108775038 -36814250 + MLT1F1 LTR MaLR 1 567 0 343 264 40 16 chr10 108775420 108775545 -36813743 - L2 LINE L2 -227 3045 2918 697 255 158 0 chr10 108775712 108775896 -36813392 - MLT1L LTR MaLR -59 556 344 1233 134 32 5 chr10 108775910 108776096 -36813192 + AluJb SINE Alu 86 276 -36 222 37 0 0 chr10 108776100 108776127 -36813161 + (CAA)n Simple_repeat Simple_repeat 1 27 0 453 167 0 51 chr10 108776186 108776264 -36813024 - FAM SINE Alu -19 166 93 1074 146 0 0 chr10 108776613 108776771 -36812517 + AluSg/x SINE Alu 134 291 -21 546 181 0 0 chr10 108776925 108777008 -36812280 - FAM SINE Alu -93 83 1 668 237 78 61 chr10 108777147 108777392 -36811896 - MLT1L LTR MaLR -365 250 2 528 104 10 31 chr10 108779043 108779139 -36810149 + MER89 LTR ERV1 1 94 -465 * 1351 177 46 107 chr10 108779106 108779350 -36809938 + MER89 LTR ERV1 197 412 -147 1792 141 7 21 chr10 108779350 108779633 -36809655 + AluJo SINE Alu 1 279 -33 1351 177 46 107 chr10 108779633 108779761 -36809527 + MER89 LTR ERV1 412 546 -13 468 371 79 16 chr10 108779781 108780099 -36809189 - L2 LINE L2 0 3272 2935 22 0 0 0 chr10 108780928 108780950 -36808338 + GC_rich Low_complexity Low_complexity 1 22 0 239 295 115 6 chr10 108781809 108781965 -36807323 + L1MC4a LINE L1 5766 5938 -1870 330 26 0 0 chr10 108781970 108782009 -36807279 + (CA)n Simple_repeat Simple_repeat 2 40 0 2220 96 14 3 chr10 108782089 108782382 -36806906 + AluSx SINE Alu 1 296 -16 2753 208 46 10 chr10 108783308 108784056 -36805232 - L1MEc LINE L1 -3681 2534 1801 1473 220 76 38 chr10 108784056 108784478 -36804810 - LTR47B LTR ERVL 0 443 6 1808 256 37 30 chr10 108784478 108784903 -36804385 - L1MEc LINE L1 -4594 1802 1368 1839 158 10 3 chr10 108784903 108785207 -36804081 - AluJo SINE Alu -6 306 1 1808 256 37 30 chr10 108785207 108785510 -36803778 - L1MEc LINE L1 -5028 1368 1069 955 198 0 6 chr10 108785713 108785880 -36803408 - FRAM SINE Alu -18 158 1 2262 112 0 0 chr10 108785892 108786195 -36803093 - AluY SINE Alu -8 303 1 349 178 200 0 chr10 108786224 108786314 -36802974 - MLT1L LTR MaLR 0 615 508 1969 154 0 6 chr10 108786416 108786727 -36802561 + AluJb SINE Alu 2 310 -2 302 0 26 0 chr10 108786949 108786987 -36802301 + (TTCA)n Simple_repeat Simple_repeat 1 39 0 801 107 7 87 chr10 108787131 108787281 -36802007 - FLAM_C SINE Alu 0 143 6 216 356 95 30 chr10 108787490 108787651 -36801637 - L2 LINE L2 -426 2888 2739 2291 102 0 10 chr10 108787651 108787955 -36801333 - AluSx SINE Alu -11 301 1 216 356 95 30 chr10 108787955 108788049 -36801239 - L2 LINE L2 -575 2739 2609 2323 128 55 0 chr10 108788049 108788392 -36800896 - MER47A DNA MER2_type -1 365 4 216 356 95 30 chr10 108788392 108788430 -36800858 - L2 LINE L2 -705 2609 2575 408 291 66 33 chr10 108788725 108788876 -36800412 - L2 LINE L2 -6 3266 3111 2486 88 0 0 chr10 108789376 108789681 -36799607 - AluSx SINE Alu -7 305 1 292 302 47 19 chr10 108789700 108789806 -36799482 - MER5B DNA MER1_type 0 178 70 344 335 97 11 chr10 108789887 108790072 -36799216 + MIR SINE MIR 62 262 0 791 173 0 0 chr10 108790491 108790624 -36798664 - FLAM_C SINE Alu 0 133 1 538 157 29 0 chr10 108791045 108791147 -36798141 - L1MC1 LINE L1 0 6333 6229 2715 42 0 0 chr10 108791187 108791495 -36797793 - AluY SINE Alu -3 308 1 1002 159 67 0 chr10 108791636 108791831 -36797457 - MER3 DNA MER1_type 0 209 2 3783 127 44 26 chr10 108791898 108792179 -36797109 - Tigger3(Golem) DNA MER2_type 0 3028 2753 1794 167 0 10 chr10 108792179 108792495 -36796793 + AluJb SINE Alu 1 313 0 3783 127 44 26 chr10 108792495 108792944 -36796344 - Tigger3(Golem) DNA MER2_type -275 2753 2284 659 174 0 9 chr10 108792944 108793053 -36796235 - Tigger3(Golem) DNA MER2_type -2921 108 1 1235 158 14 29 chr10 108793522 108793731 -36795557 - AluJo SINE Alu -106 206 1 1959 168 3 0 chr10 108793754 108794051 -36795237 - AluJb SINE Alu -14 298 1 421 177 35 35 chr10 108795651 108795764 -36793524 + Charlie1 DNA MER1_type 1 113 -2648 2054 145 48 10 chr10 108795792 108796185 -36793103 - L1MB2 LINE L1 -48 6123 5716 4692 161 83 81 chr10 108796186 108797003 -36792285 + Charlie1 DNA MER1_type 98 912 -1849 180 0 0 0 chr10 108797003 108797023 -36792265 + (GGGTG)n Simple_repeat Simple_repeat 2 21 0 4692 161 83 81 chr10 108797023 108797044 -36792244 + Charlie1 DNA MER1_type 912 931 -1830 2370 78 0 0 chr10 108797044 108797338 -36791950 - AluY SINE Alu -13 298 5 4692 161 83 81 chr10 108797338 108797852 -36791436 + Charlie1 DNA MER1_type 931 2757 -4 461 275 134 0 chr10 108798582 108798731 -36790557 + MER69A DNA AcHobo 3 171 -6 2490 82 0 0 chr10 108798806 108799111 -36790177 - AluSx SINE Alu -7 305 1 557 205 16 25 chr10 108799254 108799376 -36789912 - MIR SINE MIR -91 171 51 43 0 0 0 chr10 108799496 108799539 -36789749 + AT_rich Low_complexity Low_complexity 1 43 0 24 92 0 18 chr10 108799593 108799633 -36789655 + AT_rich Low_complexity Low_complexity 1 40 -67 2560 66 0 0 chr10 108799633 108799938 -36789350 + AluY SINE Alu 1 305 -6 24 92 0 18 chr10 108799938 108800006 -36789282 + AT_rich Low_complexity Low_complexity 40 107 0 1087 153 0 0 chr10 108800081 108800238 -36789050 + AluSg/x SINE Alu 141 297 -15 322 145 13 40 chr10 108800327 108800403 -36788885 - MLT1G1 LTR MaLR 0 595 522 218 213 43 0 chr10 108800595 108800642 -36788646 + L2 LINE L2 3264 3312 -1 1282 162 16 21 chr10 108801988 108802034 -36787254 - L1MB1 LINE L1 -1 6167 6122 1785 152 38 0 chr10 108802034 108802323 -36786965 - AluJb SINE Alu -12 300 1 1282 162 16 21 chr10 108802323 108802714 -36786574 - L1MB1 LINE L1 -46 6122 5730 1809 150 3 14 chr10 108802714 108803028 -36786260 - AluJb SINE Alu 0 311 1 1282 162 16 21 chr10 108803028 108803549 -36785739 - L1MB1 LINE L1 -438 5730 5078 338 221 21 21 chr10 108804923 108805018 -36784270 - L1MC5 LINE L1 -35 7926 7832 595 248 72 55 chr10 108805136 108805501 -36783787 - L1ME LINE L1 -240 5924 5559 2153 118 14 0 chr10 108805501 108805798 -36783490 - AluSx SINE Alu -11 301 1 595 248 72 55 chr10 108805798 108805867 -36783421 - L1ME LINE L1 -605 5559 5493 2324 90 3 0 chr10 108806422 108806712 -36782576 + AluSq SINE Alu 1 291 -22 1044 195 80 19 chr10 108807966 108808359 -36780929 - L1MDa LINE L1 -5190 1219 826 2144 117 13 0 chr10 108808363 108808661 -36780627 - AluSq SINE Alu -11 302 1 2372 97 3 0 chr10 108808702 108809011 -36780277 - AluY SINE Alu -1 310 1 228 294 0 0 chr10 108809748 108809816 -36779472 - L1MDa LINE L1 -6288 121 54 900 239 53 95 chr10 108810360 108811055 -36778233 - L1MC5 LINE L1 -36 7925 7260 1882 237 32 30 chr10 108811196 108811875 -36777413 - L1MC5 LINE L1 -731 7230 6543 1951 91 12 0 chr10 108811993 108812246 -36777042 - AluSg SINE Alu -14 296 41 1681 158 24 27 chr10 108812438 108812735 -36776553 - AluJo SINE Alu -13 299 4 784 278 54 27 chr10 108813005 108813254 -36776034 + MIR SINE MIR 8 261 -1 199 308 48 19 chr10 108813252 108813356 -36775932 + MIR SINE MIR 146 252 -10 * 870 172 94 39 chr10 108813646 108813849 -36775439 - MER20 DNA MER1_type 0 219 6 326 353 49 64 chr10 108813887 108814289 -36774999 - L2 LINE L2 -196 3076 2687 261 188 259 0 chr10 108814236 108814321 -36774967 + MIR3 SINE MIR 92 198 -10 * 339 369 0 0 chr10 108814722 108814852 -36774436 - L2 LINE L2 -954 2360 2231 2251 95 3 3 chr10 108815082 108815378 -36773910 + AluSx SINE Alu 1 296 -16 2259 152 26 66 chr10 108815506 108815977 -36773311 - L1MB7 LINE L1 -62 6122 5673 2436 89 0 0 chr10 108815977 108816279 -36773009 - AluSq SINE Alu -7 306 5 2259 152 26 66 chr10 108816279 108816339 -36772949 - L1MB7 LINE L1 -511 5673 5612 2348 92 3 0 chr10 108816691 108816994 -36772294 + AluSc SINE Alu 3 306 -3 189 0 0 0 chr10 108819944 108819965 -36769323 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 405 248 146 7 chr10 108820346 108820483 -36768805 - MIR SINE MIR -12 250 95 2210 114 0 3 chr10 108821015 108821312 -36767976 - AluSx SINE Alu -16 296 1 201 196 0 0 chr10 108821324 108821370 -36767918 + CT-rich Low_complexity Low_complexity 3 48 0 834 252 104 15 chr10 108821692 108821840 -36767448 + L2 LINE L2 2996 3129 -184 447 19 0 0 chr10 108821840 108821892 -36767396 + (TG)n Simple_repeat Simple_repeat 2 53 0 834 252 104 15 chr10 108821892 108822013 -36767275 + L2 LINE L2 3129 3289 -24 2171 108 3 3 chr10 108822737 108823034 -36766254 - AluSx SINE Alu -15 297 1 282 187 9 75 chr10 108823035 108823142 -36766146 - L1MC5 LINE L1 -23 7938 7839 2266 104 0 3 chr10 108823213 108823510 -36765778 + AluSx SINE Alu 2 297 -15 411 227 13 65 chr10 108823580 108823734 -36765554 - L1MC5 LINE L1 -118 7843 7698 24 0 0 0 chr10 108823925 108823949 -36765339 + AT_rich Low_complexity Low_complexity 1 24 0 383 254 169 19 chr10 108824758 108825021 -36764267 - MER102a DNA MER1_type -10 320 24 1864 144 3 32 chr10 108825160 108825472 -36763816 - AluJo SINE Alu -9 303 1 1851 144 17 20 chr10 108827783 108828081 -36761207 - AluJo SINE Alu -15 297 1 183 292 0 0 chr10 108828445 108828493 -36760795 - MIR SINE MIR 0 262 215 1121 102 24 0 chr10 108829367 108829534 -36759754 - L1PA16 LINE L1 -25 6141 5971 469 244 43 9 chr10 108829877 108829992 -36759296 + MIR3 SINE MIR 42 160 -48 290 223 107 45 chr10 108830142 108830263 -36759025 - MIR3 SINE MIR -5 203 69 619 212 45 0 chr10 108833016 108833148 -36756140 - MER5B DNA MER1_type 0 178 41 2371 126 48 19 chr10 108833249 108833663 -36755625 - MSTB LTR MaLR 0 426 1 205 254 36 36 chr10 108833688 108833743 -36755545 - MIR3 SINE MIR -3 205 151 448 230 26 0 chr10 108833786 108833899 -36755389 + Charlie8 DNA MER1_type 44 159 -2258 1591 287 164 40 chr10 108834241 108835134 -36754154 - L3 LINE CR1 -200 1377 365 2287 103 3 7 chr10 108835134 108835435 -36753853 + AluSq SINE Alu 1 300 -13 1591 287 164 40 chr10 108835435 108835463 -36753825 - L3 LINE CR1 -1212 365 342 286 230 239 39 chr10 108836477 108836578 -36752710 - L1MC/D LINE L1 -311 5810 5730 2209 96 0 3 chr10 108836578 108836885 -36752403 - AluSx SINE Alu 0 306 1 286 230 239 39 chr10 108836885 108837053 -36752235 - L1MC/D LINE L1 -391 5730 5581 335 82 0 0 chr10 108837053 108837102 -36752186 + Alu SINE Alu 250 298 -3 577 300 49 14 chr10 108837102 108837389 -36751899 - L1MC/D LINE L1 -2221 5587 5291 2019 142 3 16 chr10 108837428 108837739 -36751549 - AluJb SINE Alu -5 307 1 207 344 46 8 chr10 108838049 108838180 -36751108 + L2 LINE L2 2059 2194 -1120 961 172 103 138 chr10 108838814 108839134 -36750154 - AluJo SINE Alu -3 309 1 180 174 0 43 chr10 108839320 108839366 -36749922 + L2 LINE L2 3269 3312 -1 471 285 145 2 chr10 108840300 108840526 -36748762 + L2 LINE L2 2961 3268 -4 1959 101 93 0 chr10 108840662 108840940 -36748348 - AluSx SINE Alu -8 304 1 2120 135 0 0 chr10 108840940 108841237 -36748051 - AluJb SINE Alu -15 297 1 1201 197 5 0 chr10 108841351 108841559 -36747729 + MER3 DNA MER1_type 1 209 0 2279 113 0 3 chr10 108841609 108841911 -36747377 + AluSx SINE Alu 1 301 -11 527 306 148 17 chr10 108842023 108842247 -36747041 - MIR SINE MIR 0 262 14 340 351 109 28 chr10 108842617 108842828 -36746460 + L2 LINE L2 3045 3272 0 419 153 66 203 chr10 108843157 108843337 -36745951 + MER3 DNA MER1_type 1 141 -68 2111 98 0 7 chr10 108843337 108843612 -36745676 - AluSx SINE Alu -39 273 1 419 153 66 203 chr10 108843612 108843673 -36745615 + MER3 DNA MER1_type 141 209 0 216 240 0 0 chr10 108843796 108843846 -36745442 + (TG)n Simple_repeat Simple_repeat 2 51 0 2229 86 0 4 chr10 108844001 108844315 -36744973 + AluSx SINE Alu 5 317 0 2318 95 3 0 chr10 108844592 108844888 -36744400 - AluSp SINE Alu -16 297 1 536 137 0 42 chr10 108845298 108845393 -36743895 + L1M3 LINE L1 5602 5692 -479 2347 93 3 0 chr10 108845625 108845926 -36743362 - AluSc SINE Alu -7 302 1 815 134 45 15 chr10 108846083 108846217 -36743071 + MER30 DNA MER1_type 1 138 -92 1904 132 30 7 chr10 108846999 108847295 -36741993 - AluSg SINE Alu -7 303 1 687 275 95 14 chr10 108847787 108848009 -36741279 - MIR SINE MIR -16 246 7 2493 57 3 7 chr10 108848052 108848353 -36740935 + AluY SINE Alu 1 300 -11 2378 201 93 87 chr10 108849536 108850396 -36738892 + L1MC5 LINE L1 6718 7582 -379 370 211 35 88 chr10 108850509 108850623 -36738665 + MIR3 SINE MIR 72 179 -29 2280 97 10 3 chr10 108850626 108850926 -36738362 + AluSx SINE Alu 1 302 -10 316 274 51 43 chr10 108851274 108851391 -36737897 + L2 LINE L2 2561 2678 -636 293 313 113 13 chr10 108851456 108851606 -36737682 + L2 LINE L2 2916 3080 -192 1388 132 87 80 chr10 108851644 108851749 -36737539 - Tigger3(Golem) DNA MER2_type 0 3029 2926 1970 160 3 0 chr10 108851749 108852042 -36737246 + AluSx SINE Alu 1 294 -18 1388 132 87 80 chr10 108852042 108852225 -36737063 - Tigger3(Golem) DNA MER2_type -103 2926 2739 1462 177 37 41 chr10 108852225 108852519 -36736769 + AluJo SINE Alu 1 293 -19 507 207 0 8 chr10 108852544 108852647 -36736641 - Tigger3(Golem) DNA MER2_type -239 2790 2 228 271 17 0 chr10 108852665 108852724 -36736564 + L2 LINE L2 3136 3195 -77 221 284 162 28 chr10 108852923 108853039 -36736249 + MIR SINE MIR 33 167 -65 694 244 114 0 chr10 108853087 108853288 -36736000 - MIR SINE MIR -15 247 24 207 270 135 11 chr10 108854056 108854145 -36735143 + MIR SINE MIR 31 130 -132 1114 157 132 53 chr10 108854417 108854510 -36734778 - Charlie1b DNA MER1_type -2279 482 398 2183 66 0 7 chr10 108854510 108854784 -36734504 + AluSx SINE Alu 38 309 -3 1114 157 132 53 chr10 108854784 108855008 -36734280 - Charlie1b DNA MER1_type -2363 398 140 616 113 0 0 chr10 108855011 108855091 -36734197 + AluSg/x SINE Alu 212 291 -19 625 221 22 22 chr10 108855098 108855234 -36734054 - Charlie1b DNA MER1_type -387 136 1 2425 71 10 0 chr10 108855511 108855808 -36733480 - AluSq SINE Alu -8 305 6 291 246 15 39 chr10 108855906 108856036 -36733252 - HAL1b LINE L1 -1 1347 1221 2171 129 3 0 chr10 108856267 108856577 -36732711 + AluSx SINE Alu 1 311 -1 2245 102 0 0 chr10 108856871 108857154 -36732134 - AluSx SINE Alu -29 283 1 294 292 183 0 chr10 108857183 108857320 -36731968 - MIR SINE MIR -48 214 53 436 193 61 18 chr10 108858199 108858313 -36730975 - L1MC5 LINE L1 -37 7924 7806 544 214 65 127 chr10 108858315 108858434 -36730854 - MER58C DNA MER1_type -2205 215 90 1834 161 7 10 chr10 108858434 108858738 -36730550 + AluJb SINE Alu 1 303 -9 1888 145 42 14 chr10 108858748 108859106 -36730182 + L1MB8 LINE L1 5805 6172 -6 544 214 65 127 chr10 108859106 108859204 -36730084 - MER58C DNA MER1_type -2339 81 1 536 182 45 9 chr10 108859204 108859314 -36729974 - L1MC5 LINE L1 -150 7811 7698 2472 41 17 3 chr10 108859314 108859606 -36729682 + AluSp SINE Alu 2 297 -16 1125 220 89 52 chr10 108859715 108859836 -36729452 - L1MC5 LINE L1 -249 7712 7597 342 0 0 0 chr10 108859836 108859874 -36729414 + (TG)n Simple_repeat Simple_repeat 2 39 0 1125 220 89 52 chr10 108859874 108860276 -36729012 - L1MC5 LINE L1 -364 7597 7260 1073 208 73 76 chr10 108860331 108860725 -36728563 - L1MC5 LINE L1 -767 7194 6812 274 250 78 62 chr10 108861382 108861510 -36727778 - MLT1L LTR MaLR -72 543 414 3499 238 83 82 chr10 108861513 108863020 -36726268 - L1MEc LINE L1 -4440 1956 445 1524 183 57 4 chr10 108863020 108863179 -36726109 - AluJo SINE Alu -18 294 112 180 0 0 0 chr10 108863179 108863199 -36726089 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1524 183 57 4 chr10 108863199 108863318 -36725970 - AluJo SINE Alu -200 112 1 3499 238 83 82 chr10 108863318 108863735 -36725553 - L1MEc LINE L1 -5951 445 30 300 287 0 23 chr10 108863942 108864029 -36725259 - MLT1L LTR MaLR -530 85 1 2305 87 3 0 chr10 108866199 108866497 -36722791 - AluSg1 SINE Alu -10 299 1 2220 109 0 0 chr10 108867023 108867317 -36721971 + AluSg SINE Alu 1 294 -16 407 217 83 19 chr10 108867510 108867617 -36721671 + MER113 DNA MER1_type? 5 127 -394 2816 79 6 0 chr10 108867617 108867973 -36721315 + L1PA13 LINE L1 5803 6160 -3 407 217 83 19 chr10 108867973 108868022 -36721266 + MER113 DNA MER1_type? 127 171 -350 409 101 203 0 chr10 108868108 108868187 -36721101 + MER63 DNA MER1_type 3 723 -113 25 0 0 0 chr10 108868198 108868223 -36721065 + AT_rich Low_complexity Low_complexity 1 25 0 1747 182 24 0 chr10 108868223 108868514 -36720774 - AluJb SINE Alu -14 298 1 389 277 0 12 chr10 108868545 108868628 -36720660 + MER63 DNA MER1_type 979 1060 0 856 149 0 15 chr10 108869133 108869267 -36720021 - FLAM_C SINE Alu -1 132 1 387 333 46 21 chr10 108869528 108869768 -36719520 + MIR SINE MIR 17 262 0 671 279 17 11 chr10 108870638 108870817 -36718471 + MIR SINE MIR 3 182 -80 287 273 31 31 chr10 108871224 108871352 -36717936 + L2 LINE L2 3100 3227 -86 380 206 88 74 chr10 108871361 108871612 -36717676 - MER34 LTR ERV1 0 542 449 29 47 0 0 chr10 108871684 108871727 -36717561 + AT_rich Low_complexity Low_complexity 1 43 0 805 258 122 58 chr10 108872455 108872804 -36716484 - L1MC5 LINE L1 -30 7931 7606 845 182 0 0 chr10 108872804 108872936 -36716352 - FLAM_A SINE Alu 0 133 2 805 258 122 58 chr10 108872936 108873022 -36716266 - L1MC5 LINE L1 -355 7606 7527 2265 105 0 0 chr10 108873022 108873318 -36715970 + AluSx SINE Alu 1 296 -16 805 258 122 58 chr10 108873318 108873569 -36715719 - L1MC5 LINE L1 -434 7527 7256 1345 146 9 5 chr10 108873631 108873844 -36715444 + AluJo SINE Alu 87 300 -12 459 286 33 58 chr10 108874688 108874848 -36714440 - MIR SINE MIR -61 147 26 2025 155 0 3 chr10 108874848 108875157 -36714131 - AluJb SINE Alu -4 308 1 459 286 33 58 chr10 108875157 108875168 -36714120 - MIR SINE MIR -182 26 16 21 0 0 0 chr10 108875391 108875412 -36713876 + AT_rich Low_complexity Low_complexity 1 21 0 1224 114 0 12 chr10 108876652 108876818 -36712470 + AluSx SINE Alu 1 164 -148 2148 134 0 3 chr10 108878208 108878513 -36710775 - AluSg SINE Alu -6 304 1 658 103 0 0 chr10 108878513 108878600 -36710688 - Ricksha DNA DNA -1957 89 3 604 192 110 14 chr10 108878600 108878746 -36710542 + MER106B DNA MER1_type 900 1059 0 27 0 0 0 chr10 108878987 108879014 -36710274 + AT_rich Low_complexity Low_complexity 1 27 0 415 269 0 11 chr10 108879870 108879963 -36709325 - Tigger2 DNA MER2_type -10 2708 2617 2630 133 25 2 chr10 108879965 108880364 -36708924 - Tigger2 DNA MER2_type -852 1866 1459 659 85 11 11 chr10 108880364 108880458 -36708830 - MSTB1 LTR MaLR 0 432 339 1472 225 103 20 chr10 108880461 108880870 -36708418 - LTR47B LTR ERVL 0 443 1 * 1544 197 38 29 chr10 108880870 108881207 -36708081 - MSTB1 LTR MaLR -92 340 1 5712 198 97 19 chr10 108881207 108882372 -36706916 - MSTB1-int LTR MaLR 0 1651 221 1699 149 27 27 chr10 108882372 108882667 -36706621 - AluJo SINE Alu -17 295 1 5712 198 97 19 chr10 108882667 108882904 -36706384 - MSTB1-int LTR MaLR -1430 221 4 615 123 85 0 chr10 108882910 108883016 -36706272 - MSTB1 LTR MaLR -3 429 315 1725 117 27 4 chr10 108883025 108883282 -36706006 - Tigger2 DNA MER2_type -1250 1468 1206 1849 127 32 3 chr10 108883315 108883598 -36705690 + L1PA16 LINE L1 5876 6166 0 2065 128 6 32 chr10 108883610 108883922 -36705366 + AluSx SINE Alu 1 304 -8 1841 143 40 93 chr10 108883923 108884321 -36704967 + MER21B LTR ERV1 473 849 -14 4567 179 58 29 chr10 108884339 108884480 -36704808 + L1M4 LINE L1 4303 4438 -1708 2135 134 0 0 chr10 108884480 108884779 -36704509 + AluSx SINE Alu 1 299 -13 4567 179 58 29 chr10 108884779 108885645 -36703643 + L1M4 LINE L1 4438 5345 -801 1897 54 0 0 chr10 108885645 108885868 -36703420 + AluY SINE Alu 83 305 -6 4567 179 58 29 chr10 108885868 108885929 -36703359 + L1M4 LINE L1 5345 5403 -743 760 56 0 0 chr10 108885931 108886021 -36703267 + AluY SINE Alu 206 295 -16 2018 159 1 11 chr10 108886024 108886387 -36702901 + L1P3 LINE L1 5398 5747 -425 388 285 59 4 chr10 108886395 108886585 -36702703 + L1MC4a LINE L1 7121 7498 -497 2464 78 0 0 chr10 108886642 108886937 -36702351 - AluSg SINE Alu -15 295 1 413 216 11 34 chr10 108887001 108887089 -36702199 - MER81 DNA DNA 0 114 29 503 260 34 40 chr10 108887699 108887876 -36701412 - MIR SINE MIR -10 252 77 735 200 0 0 chr10 108888077 108888202 -36701086 + FLAM_A SINE Alu 1 125 -8 1519 129 13 0 chr10 108888283 108888507 -36700781 - AluSg/x SINE Alu -9 301 75 210 91 0 0 chr10 108888537 108888570 -36700718 + (TTG)n Simple_repeat Simple_repeat 1 33 0 734 165 45 8 chr10 108888572 108888705 -36700583 + L1MB8 LINE L1 6041 6178 0 2390 77 0 32 chr10 108888814 108888955 -36700333 + AluSx SINE Alu 1 145 -167 2367 66 0 7 chr10 108888955 108889244 -36700044 + AluSc SINE Alu 12 298 -11 2390 77 0 32 chr10 108889244 108889415 -36699873 + AluSx SINE Alu 145 303 -9 1749 139 7 58 chr10 108889731 108890040 -36699248 + AluJb SINE Alu 1 293 -19 1266 285 71 30 chr10 108890301 108890708 -36698580 + MLT1K LTR MaLR 165 588 0 498 268 162 58 chr10 108891013 108891497 -36697791 + MLT1L LTR MaLR 9 548 -40 2086 149 0 0 chr10 108891505 108891813 -36697475 - AluSx SINE Alu -4 308 1 12291 15 0 0 chr10 108892906 108895070 -36694218 + L1HS LINE L1 3991 6154 -1 264 30 0 0 chr10 108895099 108895132 -36694156 + (TAAAA)n Simple_repeat Simple_repeat 2 34 0 1434 161 56 67 chr10 108895326 108895611 -36693677 - AluJo SINE Alu -30 282 1 240 35 0 0 chr10 108896030 108896059 -36693229 + (TTTC)n Simple_repeat Simple_repeat 2 30 0 1979 125 4 4 chr10 108896065 108896345 -36692943 - AluSx SINE Alu -32 280 1 549 0 0 0 chr10 108896746 108896807 -36692481 + (TA)n Simple_repeat Simple_repeat 2 62 0 2409 93 3 0 chr10 108896807 108897108 -36692180 - AluSp SINE Alu -11 302 1 221 194 0 0 chr10 108897638 108897674 -36691614 - MIR SINE MIR -137 71 36 3527 124 4 16 chr10 108898048 108898602 -36690686 - L1MC1 LINE L1 0 6333 5787 9775 135 69 110 chr10 108898602 108898850 -36690438 - L1MCa LINE L1 -3977 2449 2192 1823 116 30 0 chr10 108898850 108899118 -36690170 - AluSg SINE Alu -1 309 34 9775 135 69 110 chr10 108899118 108899476 -36689812 - L1MCa LINE L1 -4234 2192 1821 1693 116 179 0 chr10 108899476 108899761 -36689527 + MER1B DNA MER1_type 1 336 -1 9775 135 69 110 chr10 108899761 108899880 -36689408 - L1MCa LINE L1 -4605 1821 1699 381 22 0 0 chr10 108899880 108899926 -36689362 + (GA)n Simple_repeat Simple_repeat 2 47 0 667 170 9 0 chr10 108899927 108900033 -36689255 - FLAM_A SINE Alu -35 107 1 9775 135 69 110 chr10 108900033 108901534 -36687754 - L1MCa LINE L1 -4727 1699 223 2365 51 54 3 chr10 108901534 108901830 -36687458 - AluY SINE Alu 0 311 1 9775 135 69 110 chr10 108901830 108902007 -36687281 - L1MCa LINE L1 -6203 223 40 581 131 0 0 chr10 108902118 108902202 -36687086 + AluJ/FLAM SINE Alu 2 85 -227 1734 157 18 31 chr10 108902412 108902835 -36686453 - L1M2 LINE L1 -720 5592 5176 935 229 74 23 chr10 108902818 108903128 -36686160 - L1MC5 LINE L1 -370 7591 7266 * 1811 161 13 19 chr10 108903221 108903531 -36685757 + AluJo SINE Alu 5 312 0 2026 105 4 11 chr10 108906978 108907255 -36682033 - AluSx SINE Alu -27 285 11 480 203 127 8 chr10 108907631 108907749 -36681539 + FLAM_A SINE Alu 9 140 -2 1347 160 103 26 chr10 108907973 108908031 -36681257 - L1MB8 LINE L1 -6 6172 6120 2016 117 41 21 chr10 108908031 108908169 -36681119 + AluSx SINE Alu 1 135 -177 2494 71 3 0 chr10 108908169 108908465 -36680823 + AluSg SINE Alu 1 297 -13 2016 117 41 21 chr10 108908465 108908616 -36680672 + AluSx SINE Alu 135 296 -16 1347 160 103 26 chr10 108908616 108908869 -36680419 - L1MB8 LINE L1 -58 6120 5837 244 65 22 65 chr10 108908898 108908944 -36680344 - Alu SINE Alu -13 295 252 336 249 196 19 chr10 108908949 108909158 -36680130 - L1P4 LINE L1 -615 5551 5306 1906 156 3 16 chr10 108909227 108909541 -36679747 + AluJb SINE Alu 1 310 -2 2312 108 16 0 chr10 108910879 108911185 -36678103 + AluSx SINE Alu 1 311 -1 560 291 170 36 chr10 108911381 108911880 -36677408 - L1MC4a LINE L1 -1974 5834 5269 2301 114 0 0 chr10 108912572 108912871 -36676417 + AluSx SINE Alu 1 299 -13 2789 209 14 16 chr10 108912916 108913466 -36675822 - MLT1F1 LTR MaLR -11 556 8 408 302 88 10 chr10 108914247 108914452 -36674836 + Charlie8 DNA MER1_type 59 279 -2138 2119 125 13 0 chr10 108915983 108916287 -36673001 - AluSq SINE Alu -5 308 1 1481 163 7 18 chr10 108916561 108916838 -36672450 - Charlie4a DNA MER1_type 0 508 235 2199 110 0 0 chr10 108916863 108917144 -36672144 + AluSq SINE Alu 1 281 -32 821 38 0 9 chr10 108917145 108917251 -36672037 + (GAAA)n Simple_repeat Simple_repeat 2 106 0 755 231 18 12 chr10 108917283 108917452 -36671836 + AluJo SINE Alu 117 286 -26 1999 133 0 44 chr10 108917527 108917669 -36671619 + AluSx SINE Alu 1 148 -164 2245 113 7 0 chr10 108917669 108917978 -36671310 + AluSq SINE Alu 1 311 -2 1999 133 0 44 chr10 108917978 108918152 -36671136 + AluSx SINE Alu 148 303 -9 254 229 33 0 chr10 108919087 108919148 -36670140 - L2 LINE L2 0 3313 3251 602 309 134 15 chr10 108919216 108919706 -36669582 - L2 LINE L2 -174 3139 2599 1754 203 107 19 chr10 108919858 108920287 -36669001 - MLT1C LTR MaLR 0 467 1 1738 183 13 3 chr10 108921366 108921666 -36667622 + AluJo SINE Alu 1 303 -9 2293 102 0 7 chr10 108922677 108922982 -36666306 - AluSc SINE Alu -6 303 1 194 253 145 0 chr10 108923766 108923849 -36665439 - MIR SINE MIR -91 171 77 322 288 59 17 chr10 108924141 108924259 -36665029 - MER91A DNA MER1_type -2 194 72 2206 129 0 0 chr10 108924404 108924715 -36664573 - AluSx SINE Alu -1 311 1 305 205 0 12 chr10 108924877 108924960 -36664328 + CT-rich Low_complexity Low_complexity 3 84 0 362 321 24 92 chr10 108924990 108925239 -36664049 - L2 LINE L2 -67 3205 2974 733 269 81 59 chr10 108926288 108926694 -36662594 - L2 LINE L2 -61 3252 2838 1551 210 150 93 chr10 108927113 108927520 -36661768 - L1MC5 LINE L1 -46 7915 7533 318 26 0 0 chr10 108927520 108927559 -36661729 + (TG)n Simple_repeat Simple_repeat 2 40 0 1551 210 150 93 chr10 108927559 108927793 -36661495 - L1MC5 LINE L1 -428 7533 7314 637 253 16 44 chr10 108927793 108927975 -36661313 + MER5B DNA MER1_type 1 177 -1 1551 210 150 93 chr10 108927975 108928237 -36661051 - L1MC5 LINE L1 -647 7314 6959 230 236 45 91 chr10 108928383 108928493 -36660795 + MIR SINE MIR 48 152 -110 639 247 41 12 chr10 108929282 108929452 -36659836 + MIR3 SINE MIR 16 190 -18 245 281 12 105 chr10 108929810 108929981 -36659307 + MIR SINE MIR 76 230 -32 1622 269 55 43 chr10 108930380 108930530 -36658758 - REP3 LTR ERV -41 521 374 2077 116 0 0 chr10 108930530 108930828 -36658460 + AluSx SINE Alu 14 311 0 1622 269 55 43 chr10 108930828 108931188 -36658100 - REP3 LTR ERV -188 374 4 2425 91 3 0 chr10 108932189 108932487 -36656801 + AluSp SINE Alu 1 299 -14 1865 170 3 0 chr10 108932495 108932789 -36656499 + AluJb SINE Alu 1 295 -17 303 248 56 40 chr10 108934017 108934142 -36655146 - MIR3 SINE MIR -48 160 34 294 308 33 33 chr10 108934724 108934844 -36654444 + MER5A DNA MER1_type 70 189 0 2238 97 21 0 chr10 108934880 108935168 -36654120 + AluSx SINE Alu 1 294 -18 236 216 0 0 chr10 108935508 108935559 -36653729 + L1MC4 LINE L1 6653 6703 -1339 * 241 274 71 0 chr10 108935515 108935599 -36653689 - L1MC4 LINE L1 -1339 6703 6614 327 311 0 0 chr10 108935600 108935732 -36653556 + (TA)n Simple_repeat Simple_repeat 1 132 0 225 224 26 26 chr10 108935741 108935817 -36653471 + L1MC3 LINE L1 6571 6646 -1139 * 231 304 0 22 chr10 108935787 108935879 -36653409 - L1MC4 LINE L1 -1339 6703 6614 258 260 0 62 chr10 108935889 108935985 -36653303 + L1MC4 LINE L1 6614 6703 -1339 377 254 17 0 chr10 108935989 108936107 -36653181 + (CATATA)n Simple_repeat Simple_repeat 6 125 0 257 299 23 0 chr10 108936108 108936195 -36653093 - L1MC4 LINE L1 -1340 6702 6614 * 281 259 25 0 chr10 108936132 108936213 -36653075 + L1MC4 LINE L1 6621 6703 -1339 222 300 0 0 chr10 108936214 108936264 -36653024 + (TATG)n Simple_repeat Simple_repeat 3 52 0 2009 130 0 47 chr10 108936264 108936418 -36652870 - AluSx SINE Alu -26 286 151 2836 87 8 0 chr10 108936418 108936797 -36652491 - L1PA8A LINE L1 0 6131 5750 2009 130 0 47 chr10 108936797 108936942 -36652346 - AluSx SINE Alu -161 151 1 2512 71 0 0 chr10 108937416 108937712 -36651576 - AluSg1 SINE Alu -13 296 1 2071 106 14 0 chr10 108937720 108938024 -36651264 - AluSx SINE Alu 0 310 3 2097 112 62 16 chr10 108938074 108938396 -36650892 + MER1B DNA MER1_type 1 337 0 296 214 19 58 chr10 108939167 108939270 -36650018 - MIR SINE MIR -73 135 37 308 247 22 112 chr10 108939306 108939388 -36649900 - L1ME4a LINE L1 -229 5892 5833 2228 110 3 0 chr10 108939388 108939680 -36649608 + AluSx SINE Alu 1 293 -19 308 247 22 112 chr10 108939680 108939775 -36649513 - L1ME4a LINE L1 -288 5833 5731 427 265 100 29 chr10 108939875 108940045 -36649243 - L2 LINE L2 -1 3312 3131 2380 92 3 0 chr10 108941556 108941837 -36647451 + AluSp SINE Alu 1 285 -28 180 0 0 0 chr10 108941837 108941857 -36647431 + (CA)n Simple_repeat Simple_repeat 1 20 0 2380 92 3 0 chr10 108941857 108941879 -36647409 + AluSp SINE Alu 285 305 -8 819 144 8 15 chr10 108941923 108942056 -36647232 + AluJb SINE Alu 2 132 -180 7987 43 8 25 chr10 108942258 108943244 -36646044 - LTR5 LTR ERVK 0 969 1 445 63 11 168 chr10 108943244 108943339 -36645949 - SVA Other Other -450 936 857 48951 46 6 3 chr10 108943339 108949406 -36639882 - HERVK LTR ERVK -1467 6599 1 259 0 0 0 chr10 108949406 108949435 -36639853 - LTR5 LTR ERVK 0 969 941 783 184 147 16 chr10 108949835 108950025 -36639263 - MLT1C LTR MaLR 0 467 253 3884 189 70 53 chr10 108950029 108950974 -36638314 - L1M4 LINE L1 -5574 968 8 189 0 0 0 chr10 108950992 108951013 -36638275 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 1692 162 28 0 chr10 108951082 108951372 -36637916 - AluJb SINE Alu -14 298 1 720 188 0 36 chr10 108952661 108952799 -36636489 - FLAM_A SINE Alu 0 133 1 237 233 153 93 chr10 108953688 108953838 -36635450 - L2 LINE L2 -6 3307 3149 377 222 40 40 chr10 108954254 108954353 -36634935 - L2 LINE L2 0 3272 3174 944 87 8 0 chr10 108955500 108955627 -36633661 - AluSp SINE Alu -185 128 1 329 276 103 48 chr10 108957880 108958025 -36631263 + MIR SINE MIR 21 173 -89 2132 100 7 3 chr10 108958584 108958883 -36630405 - AluSp SINE Alu -13 300 1 6699 64 6 41 chr10 108958911 108960119 -36629169 - SVA Other Other -580 1386 433 387 323 90 5 chr10 108960358 108960547 -36628741 - L1MC4a LINE L1 -1974 5834 5630 2613 79 31 90 chr10 108960657 108961326 -36627962 - SVA Other Other -518 868 393 21 36 0 0 chr10 108961377 108961405 -36627883 + GC_rich Low_complexity Low_complexity 1 28 0 2032 106 3 38 chr10 108961701 108962021 -36627267 - AluSc SINE Alu 0 309 1 2013 137 0 7 chr10 108962477 108962783 -36626505 + AluJb SINE Alu 1 304 -8 287 294 0 15 chr10 108962783 108962851 -36626437 + MER5A DNA MER1_type 66 132 -57 278 254 30 15 chr10 108963802 108963869 -36625419 + L2 LINE L2 3246 3313 0 2172 104 0 10 chr10 108963978 108964277 -36625011 + AluSx SINE Alu 5 300 -12 212 314 23 47 chr10 108964842 108964928 -36624360 + L2 LINE L2 3203 3286 -27 2027 134 0 10 chr10 108966211 108966539 -36622749 - AluSx SINE Alu 0 312 1 1450 167 16 4 chr10 108967699 108967957 -36621331 + AluJb SINE Alu 38 298 -14 2121 105 0 3 chr10 108968526 108968820 -36620468 + AluSx SINE Alu 1 293 -19 2127 79 4 4 chr10 108968845 108969148 -36620140 + AluSg1 SINE Alu 1 303 0 384 240 48 24 chr10 108969248 108969373 -36619915 - MER5B DNA MER1_type -50 128 1 356 289 211 0 chr10 108969741 108969883 -36619405 + MER5A DNA MER1_type 18 189 0 327 282 13 0 chr10 108969902 108969980 -36619308 + MER5B DNA MER1_type 15 93 -85 291 295 78 23 chr10 108970120 108970149 -36619139 - L2 LINE L2 -3 3269 3243 2055 78 3 20 chr10 108970149 108970442 -36618846 + AluSp SINE Alu 1 288 -25 291 295 78 23 chr10 108970442 108970541 -36618747 - L2 LINE L2 -29 3243 3134 222 328 88 24 chr10 108971484 108971609 -36617679 - MER5A DNA MER1_type -10 179 47 186 317 92 35 chr10 108971496 108971638 -36617650 + MER5A DNA MER1_type 34 183 -6 * 278 298 0 12 chr10 108972092 108972177 -36617111 - MIR3 SINE MIR -53 155 71 187 239 197 0 chr10 108972317 108972388 -36616900 + MIR3 SINE MIR 114 198 -10 627 231 44 0 chr10 108972471 108972631 -36616657 - L1ME3A LINE L1 -232 5938 5772 310 243 86 104 chr10 108972889 108973169 -36616119 - L1ME3A LINE L1 -2 6168 5894 * 812 270 75 16 chr10 108973146 108973464 -36615824 - L1ME3A LINE L1 -203 5967 5631 288 301 18 0 chr10 108973533 108973646 -36615642 - L1M2 LINE L1 -823 5468 5354 868 308 83 3 chr10 108973649 108973987 -36615301 - L1MEd LINE L1 -5298 821 457 296 261 50 42 chr10 108974406 108974525 -36614763 - MER94 DNA DNA 0 134 15 524 214 138 0 chr10 108974785 108974930 -36614358 - MER104 DNA Tc2 -13 167 3 28 0 0 0 chr10 108975252 108975280 -36614008 + AT_rich Low_complexity Low_complexity 1 28 0 2317 92 0 0 chr10 108975630 108975935 -36613353 + AluSx SINE Alu 1 305 -7 1025 233 270 6 chr10 108976172 108976516 -36612772 + LTR50 LTR ERVL 1 435 -360 1780 146 0 41 chr10 108976928 108977243 -36612045 + AluJo SINE Alu 1 302 -10 670 124 21 0 chr10 108977416 108977513 -36611775 + AluJ/FLAM SINE Alu 2 100 -212 1577 86 40 5 chr10 108977818 108978040 -36611248 + MER30 DNA MER1_type 1 230 0 939 204 94 0 chr10 108978429 108978620 -36610668 + MER58A DNA MER1_type 16 224 0 2296 79 3 3 chr10 108978683 108978986 -36610302 + AluSp SINE Alu 1 303 -10 2341 174 56 12 chr10 108979021 108979503 -36609785 + MLT1D LTR MaLR 1 503 -2 393 221 208 60 chr10 108980982 108981131 -36608157 - MER5A DNA MER1_type -2 187 17 778 154 0 91 chr10 108981131 108981164 -36608124 - AluJo/FRAM SINE Alu -6 296 262 2182 110 3 0 chr10 108981164 108981465 -36607823 + AluSp SINE Alu 1 302 -11 778 154 0 91 chr10 108981465 108981606 -36607682 - AluJo/FRAM SINE Alu -40 262 138 562 79 0 0 chr10 108981975 108982051 -36607237 - Alu SINE Alu -10 300 225 1082 115 0 12 chr10 108982051 108982216 -36607072 - AluYb8 SINE Alu -155 163 1 3637 153 56 32 chr10 108982353 108982512 -36606776 - L1MA8 LINE L1 0 6291 6137 1984 123 0 17 chr10 108982512 108982813 -36606475 + AluSx SINE Alu 1 296 -16 3637 153 56 32 chr10 108982813 108983043 -36606245 - L1MA8 LINE L1 -154 6137 5914 1327 161 58 87 chr10 108983043 108983353 -36605935 - AluJb SINE Alu -11 301 1 3637 153 56 32 chr10 108983353 108983731 -36605557 - L1MA8 LINE L1 -377 5914 5505 3480 147 45 20 chr10 108983734 108984074 -36605214 - L1MA4 LINE L1 -166 6134 5769 1920 135 10 0 chr10 108984074 108984371 -36604917 - AluSx SINE Alu -12 300 1 3480 147 45 20 chr10 108984371 108984670 -36604618 - L1MA4 LINE L1 -531 5769 5479 441 0 0 0 chr10 108984670 108984719 -36604569 + (TG)n Simple_repeat Simple_repeat 2 50 0 11416 113 20 25 chr10 108984721 108985973 -36603315 - L1PA8 LINE L1 -6 6481 5225 2178 80 0 48 chr10 108985973 108986284 -36603004 - AluSp SINE Alu -17 296 1 11416 113 20 25 chr10 108986284 108989266 -36600022 - L1PA8 LINE L1 -1262 5225 2159 2069 104 4 0 chr10 108989266 108989546 -36599742 + AluSq SINE Alu 14 294 -19 11416 113 20 25 chr10 108989546 108991687 -36597601 - L1PA8 LINE L1 -4328 2159 10 542 105 32 11 chr10 108991699 108991794 -36597494 - L1MA4 LINE L1 -811 5489 5393 1566 176 7 26 chr10 108991794 108992101 -36597187 - AluJo SINE Alu -11 301 1 1882 233 61 17 chr10 108992101 108992251 -36597037 - L1MA4 LINE L1 -814 5332 5190 1519 162 47 17 chr10 108992251 108992548 -36596740 - AluJo SINE Alu -6 306 1 1882 233 61 17 chr10 108992548 108992891 -36596397 - L1MA4 LINE L1 -956 5190 4772 1583 196 14 0 chr10 108992891 108993187 -36596101 - AluJb SINE Alu -12 300 1 1882 233 61 17 chr10 108993187 108993344 -36595944 - L1MA4 LINE L1 -1374 4772 4623 242 356 39 0 chr10 108993872 108993976 -36595312 + MIR SINE MIR 5 112 -150 544 146 22 0 chr10 108993988 108994077 -36595211 - AluJb SINE Alu -20 292 202 1555 213 46 16 chr10 108995338 108995704 -36593584 - L1M3e LINE L1 -6653 377 1 582 230 138 0 chr10 108995718 108995853 -36593435 - MIR SINE MIR -58 204 49 315 312 34 54 chr10 108995853 108996058 -36593230 + MIR3 SINE MIR 3 203 -5 218 221 208 13 chr10 108996170 108996247 -36593041 + MIR SINE MIR 80 171 -91 1819 142 30 10 chr10 108996340 108996636 -36592652 - AluSx SINE Alu -10 302 1 709 126 90 0 chr10 108997555 108997666 -36591622 + FLAM_C SINE Alu 6 126 -17 729 165 0 0 chr10 108998692 108998813 -36590475 + MER3 DNA MER1_type 76 196 -13 1981 127 0 7 chr10 108998843 108999135 -36590153 + AluSx SINE Alu 1 290 -22 1180 157 102 8 chr10 108999135 108999371 -36589917 + AluSx SINE Alu 32 289 -23 753 93 37 0 chr10 109000116 109000223 -36589065 + AluSc SINE Alu 11 121 -188 1156 57 0 0 chr10 109000223 109000363 -36588925 + AluSg/x SINE Alu 160 299 -13 1674 128 48 24 chr10 109000444 109000733 -36588555 + AluSx SINE Alu 1 296 -16 615 156 90 33 chr10 109002085 109002207 -36587081 + FLAM_C SINE Alu 7 135 -8 1966 127 0 7 chr10 109002207 109002499 -36586789 + AluSq SINE Alu 3 292 -21 617 223 50 7 chr10 109003151 109003290 -36585998 - MER46C DNA MER2_type -2 336 192 1939 139 64 9 chr10 109003308 109003653 -36585635 + L1MA6 LINE L1 5819 6182 -118 1063 170 31 0 chr10 109003655 109003849 -36585439 + AluJb SINE Alu 87 286 -26 263 130 56 19 chr10 109003850 109003904 -36585384 + L1MA5 LINE L1 6245 6300 0 276 246 0 0 chr10 109003960 109004017 -36585271 + MER63 DNA MER1_type 464 520 -540 1683 133 70 7 chr10 109004044 109004330 -36584958 + AluSx SINE Alu 1 304 -8 274 260 14 0 chr10 109004335 109004408 -36584880 - MER46C DNA MER2_type -171 167 94 1458 147 94 7 chr10 109004644 109004930 -36584358 + AluJo SINE Alu 2 312 0 1837 138 21 3 chr10 109005888 109006171 -36583117 + AluSx SINE Alu 1 288 -24 2024 105 0 24 chr10 109006492 109006787 -36582501 + AluSc SINE Alu 3 290 -19 208 206 0 48 chr10 109007139 109007202 -36582086 + GA-rich Low_complexity Low_complexity 1 60 0 706 68 0 0 chr10 109008355 109008443 -36580845 - AluSg/x SINE Alu -17 295 208 1958 120 32 0 chr10 109008515 109008798 -36580490 + AluSx SINE Alu 1 292 -20 2257 76 7 0 chr10 109009094 109009382 -36579906 - AluSp SINE Alu -21 292 3 1946 142 0 0 chr10 109009460 109009770 -36579518 - AluSx SINE Alu 0 312 3 274 273 22 138 chr10 109010558 109010833 -36578455 + L2 LINE L2 2998 3240 -73 336 71 0 0 chr10 109010907 109010949 -36578339 + AluSq/x SINE Alu 78 119 -184 196 356 20 10 chr10 109011161 109011262 -36578026 + L2 LINE L2 2988 3089 -224 2042 119 7 0 chr10 109011915 109012208 -36577080 - AluSx SINE Alu -17 295 1 383 282 121 100 chr10 109012222 109012411 -36576877 + L1ME LINE L1 4876 5060 -1086 9818 30 7 156 chr10 109012411 109014038 -36575250 + SVA Other Other 3 1386 0 383 282 121 100 chr10 109014038 109014227 -36575061 + L1ME LINE L1 5060 5262 -884 258 241 123 56 chr10 109014239 109014434 -36574854 + L1ME LINE L1 5297 5504 -2304 233 373 65 0 chr10 109014556 109014709 -36574579 + L1ME LINE L1 5662 5824 -297 1989 115 31 0 chr10 109014715 109015002 -36574286 + AluSc SINE Alu 1 296 -13 1253 163 167 0 chr10 109015290 109015536 -36573752 + AluJo SINE Alu 1 287 -25 2088 125 0 3 chr10 109016384 109016689 -36572599 - AluSq SINE Alu -9 304 1 197 353 90 6 chr10 109017124 109017280 -36572008 + MIR3 SINE MIR 39 207 -1 302 307 95 7 chr10 109017875 109018012 -36571276 + MIR SINE MIR 6 154 -108 1818 119 79 0 chr10 109018916 109019193 -36570095 + AluSg SINE Alu 1 299 -11 497 254 214 0 chr10 109019722 109019895 -36569393 - L2 LINE L2 -1 3312 3103 2168 90 13 10 chr10 109020172 109020483 -36568805 + AluSx SINE Alu 1 312 0 1841 135 0 0 chr10 109020581 109020848 -36568440 + AluSq SINE Alu 1 267 -46 426 129 32 0 chr10 109020848 109020910 -36568378 + AluS SINE Alu 230 293 -19 1057 123 102 5 chr10 109021554 109021741 -36567547 - AluJb SINE Alu -21 291 87 1302 115 21 0 chr10 109021895 109022087 -36567201 - AluSg/x SINE Alu -11 299 104 1717 146 7 0 chr10 109022210 109022484 -36566804 - AluJb SINE Alu -23 289 14 812 191 43 130 chr10 109022490 109022789 -36566499 - Charlie4a DNA MER1_type -182 326 54 1607 142 49 3 chr10 109023164 109023452 -36565836 - AluJb SINE Alu -11 301 1 2312 97 0 0 chr10 109023562 109023871 -36565417 - AluSx SINE Alu -3 309 1 25 0 0 0 chr10 109024033 109024058 -36565230 + AT_rich Low_complexity Low_complexity 1 25 0 2190 99 0 7 chr10 109024316 109024620 -36564668 - AluSg SINE Alu -8 302 1 333 0 0 0 chr10 109024650 109024687 -36564601 + (TG)n Simple_repeat Simple_repeat 2 38 0 417 273 70 0 chr10 109024705 109024848 -36564440 - MIR SINE MIR -78 184 32 347 239 11 0 chr10 109024869 109024961 -36564327 - L1MC4 LINE L1 -1 8041 7949 743 132 0 0 chr10 109024976 109025090 -36564198 - FLAM_C SINE Alu -19 124 11 2243 80 7 0 chr10 109025471 109025759 -36563529 - AluSp SINE Alu -21 292 3 1981 141 0 0 chr10 109025839 109026151 -36563137 - AluSx SINE Alu 0 312 1 260 191 0 0 chr10 109026543 109026590 -36562698 - AluJb SINE Alu -10 292 246 1625 152 0 12 chr10 109026901 109027157 -36562131 - AluJb SINE Alu -55 257 5 452 193 7 110 chr10 109027484 109027553 -36561735 - L2 LINE L2 -776 2538 2490 2393 67 3 0 chr10 109027553 109027850 -36561438 + AluSp SINE Alu 1 298 -15 452 193 7 110 chr10 109027850 109027925 -36561363 - L2 LINE L2 -824 2490 2409 1529 273 97 46 chr10 109027990 109028137 -36561151 - L2 LINE L2 -1156 2158 2020 2068 113 0 0 chr10 109028137 109028429 -36560859 + AluSx SINE Alu 2 293 -19 1529 273 97 46 chr10 109028429 109028973 -36560315 - L2 LINE L2 -1294 2020 1432 568 232 72 8 chr10 109028963 109029088 -36560200 - MIR SINE MIR -128 134 2 * 2022 143 77 31 chr10 109029173 109029565 -36559723 - LTR8A LTR ERV1 0 727 318 2203 105 0 0 chr10 109029669 109029974 -36559314 + AluSx SINE Alu 1 305 -7 1723 147 4 7 chr10 109030751 109031030 -36558258 + AluJb SINE Alu 11 288 -24 217 218 0 77 chr10 109031051 109031129 -36558159 + MIR3 SINE MIR 137 208 0 2324 84 0 0 chr10 109031454 109031764 -36557524 - AluY SINE Alu -1 310 1 22 0 0 0 chr10 109032289 109032311 -36556977 + AT_rich Low_complexity Low_complexity 1 22 0 910 186 147 27 chr10 109032697 109032955 -36556333 + AluSx SINE Alu 3 291 -11 524 211 66 61 chr10 109032955 109033183 -36556105 + L1MC4 LINE L1 7813 8041 -1 689 330 35 4 chr10 109033450 109033680 -36555608 - MIR SINE MIR -10 252 16 350 308 23 30 chr10 109034006 109034139 -36555149 - MER5A DNA MER1_type -13 176 45 651 185 54 31 chr10 109034156 109034286 -36555002 - FLAM_A SINE Alu 0 133 1 863 128 0 8 chr10 109034475 109034600 -36554688 + FLAM_C SINE Alu 1 124 -9 438 285 35 21 chr10 109034678 109034822 -36554466 + MIR SINE MIR 53 198 -64 1730 136 4 18 chr10 109035416 109035689 -36553599 - LTR8A LTR ERV1 -442 285 17 206 254 17 17 chr10 109036024 109036083 -36553205 + CT-rich Low_complexity Low_complexity 3 61 0 2066 109 3 7 chr10 109036576 109036878 -36552410 - AluSx SINE Alu -11 301 1 269 241 166 86 chr10 109037064 109037251 -36552037 - MIR3 SINE MIR -2 206 5 423 291 43 35 chr10 109037622 109037763 -36551525 + MIR SINE MIR 34 175 -87 1800 91 0 73 chr10 109037939 109038226 -36551062 + AluSx SINE Alu 20 285 -27 325 270 54 27 chr10 109038515 109038626 -36550662 + MIR SINE MIR 40 153 -55 2405 53 3 13 chr10 109038647 109038951 -36550337 - AluSq SINE Alu -12 301 1 1631 149 4 8 chr10 109038965 109039226 -36550062 - AluJb SINE Alu -52 260 1 1906 170 63 8 chr10 109039228 109039610 -36549678 - L1MC4 LINE L1 -868 7174 6772 1712 156 7 10 chr10 109039635 109039924 -36549364 - AluSx SINE Alu -24 288 1 1788 163 0 35 chr10 109041144 109041463 -36547825 - AluSx SINE Alu -4 308 1 357 247 155 10 chr10 109041541 109041638 -36547650 + L2 LINE L2 3187 3297 -16 1670 155 53 0 chr10 109042055 109042339 -36546949 + AluJo SINE Alu 1 299 -13 286 273 98 3 chr10 109042356 109042478 -36546810 - MIR3 SINE MIR -15 193 60 36 243 0 0 chr10 109042664 109042734 -36546554 + GC_rich Low_complexity Low_complexity 1 70 0 213 65 0 0 chr10 109042734 109042765 -36546523 + (G)n Simple_repeat Simple_repeat 1 31 0 255 170 15 15 chr10 109042791 109042860 -36546428 + C-rich Low_complexity Low_complexity 6 71 0 49 20 0 0 chr10 109042860 109042911 -36546377 + GC_rich Low_complexity Low_complexity 1 51 0 405 77 0 0 chr10 109043092 109043144 -36546144 + MER66A LTR ERV1 287 338 -140 1844 172 3 7 chr10 109043165 109043473 -36545815 + AluJo SINE Alu 1 307 -5 300 284 0 42 chr10 109046518 109046613 -36542675 - L1MC4 LINE L1 -1338 6704 6614 210 143 0 0 chr10 109046613 109046648 -36542640 + (CA)n Simple_repeat Simple_repeat 2 36 0 21 0 0 0 chr10 109046806 109046827 -36542461 + AT_rich Low_complexity Low_complexity 1 21 0 1871 155 0 26 chr10 109046835 109047144 -36542144 + AluJb SINE Alu 1 301 -11 611 189 239 0 chr10 109047145 109047346 -36541942 - MIR SINE MIR -13 249 1 1960 106 84 0 chr10 109047591 109047866 -36541422 + AluSx SINE Alu 1 298 -14 21 71 0 0 chr10 109048036 109048078 -36541210 + AT_rich Low_complexity Low_complexity 1 42 0 975 146 6 6 chr10 109048276 109048434 -36540854 + AluSc SINE Alu 145 302 -7 2321 105 0 0 chr10 109048489 109048784 -36540504 + AluSx SINE Alu 3 297 -15 954 128 0 0 chr10 109048808 109048949 -36540339 + AluSg/x SINE Alu 170 310 0 416 93 0 0 chr10 109048968 109049022 -36540266 + U2 snRNA snRNA 1 54 -134 183 100 0 0 chr10 109050089 109050119 -36539169 + (CA)n Simple_repeat Simple_repeat 1 30 0 28 0 0 0 chr10 109050960 109050988 -36538300 + AT_rich Low_complexity Low_complexity 1 28 0 511 341 70 11 chr10 109052334 109052618 -36536670 - L2 LINE L2 -1192 2122 1822 2144 135 3 0 chr10 109052724 109053027 -36536261 - AluSx SINE Alu -8 304 1 808 220 44 0 chr10 109053082 109053241 -36536047 - MER69A DNA AcHobo -7 170 5 342 196 64 146 chr10 109053859 109054078 -36535210 - L2 LINE L2 -1 3312 3112 2230 113 0 3 chr10 109054217 109054508 -36534780 + AluSc SINE Alu 1 290 -19 29 0 0 0 chr10 109054508 109054537 -36534751 + AT_rich Low_complexity Low_complexity 1 29 0 1298 174 56 77 chr10 109055265 109055588 -36533700 + AluJb SINE Alu 1 317 0 2286 116 0 7 chr10 109055658 109055968 -36533320 - AluSq SINE Alu -5 308 1 181 250 226 0 chr10 109056567 109056651 -36532637 - L2 LINE L2 -6 3307 3205 260 263 181 31 chr10 109056738 109056898 -36532390 - L2 LINE L2 -259 3054 2871 891 221 101 16 chr10 109056925 109057183 -36532105 - L2 LINE L2 -549 2765 2486 427 331 0 0 chr10 109057566 109057693 -36531595 + L2 LINE L2 3146 3272 0 2743 198 43 43 chr10 109058126 109058757 -36530531 - MER99 DNA DNA -3 825 195 2291 99 0 10 chr10 109058972 109059275 -36530013 - AluSx SINE Alu -12 300 1 5412 149 59 7 chr10 109059432 109060583 -36528705 + L1PA16 LINE L1 4793 6020 -146 225 0 0 0 chr10 109060583 109060608 -36528680 + (GGGA)n Simple_repeat Simple_repeat 2 26 0 5412 149 59 7 chr10 109060608 109060759 -36528529 + L1PA16 LINE L1 6020 6162 -4 518 189 91 0 chr10 109060874 109061006 -36528282 + L1MD3 LINE L1 7844 7987 -8 697 122 32 24 chr10 109061019 109061142 -36528146 + L1MC1 LINE L1 6210 6333 0 372 219 92 59 chr10 109061325 109061444 -36527844 - MER99 DNA DNA -704 124 2 2257 109 0 0 chr10 109061698 109062035 -36527253 + AluSq SINE Alu 1 337 0 195 139 0 0 chr10 109062209 109062245 -36527043 + (CAATT)n Simple_repeat Simple_repeat 1 36 0 2141 122 57 23 chr10 109063028 109063380 -36525908 + THE1B LTR MaLR 1 364 0 7348 89 9 1 chr10 109063382 109064343 -36524945 + THE1B-int LTR MaLR 3 971 -609 400 278 166 16 chr10 109065485 109065672 -36523616 + MIR SINE MIR 36 250 -12 610 284 48 77 chr10 109066153 109066610 -36522678 - L1ME LINE L1 -5539 531 88 739 183 0 21 chr10 109066620 109066762 -36522526 + FRAM SINE Alu 1 40 0 301 253 0 0 chr10 109067406 109067485 -36521803 - L1ME1 LINE L1 -273 5893 5815 2454 82 0 3 chr10 109067485 109067788 -36521500 + AluY SINE Alu 1 302 -9 1854 161 3 10 chr10 109067817 109068121 -36521167 + AluJo SINE Alu 1 302 -10 458 198 36 224 chr10 109068123 109068311 -36520977 + MIR SINE MIR 12 121 -141 1706 161 19 45 chr10 109068311 109068388 -36520900 + AluJb SINE Alu 1 78 -234 2420 87 0 0 chr10 109068388 109068686 -36520602 - AluSg SINE Alu -12 298 1 1706 161 19 45 chr10 109068686 109068918 -36520370 + AluJb SINE Alu 78 302 -10 458 198 36 224 chr10 109068918 109069037 -36520251 + MIR SINE MIR 121 261 -1 1017 140 23 6 chr10 109069145 109069316 -36519972 + L1MB7 LINE L1 5992 6165 -19 1915 141 10 14 chr10 109069380 109069671 -36519617 + AluJb SINE Alu 1 290 -22 913 216 24 44 chr10 109069982 109070232 -36519056 + MIR SINE MIR 10 254 -8 288 295 25 102 chr10 109070671 109070783 -36518505 + L2 LINE L2 2594 2713 -601 641 161 81 16 chr10 109070783 109070907 -36518381 - FLAM_A SINE Alu -1 132 1 1865 145 24 0 chr10 109070917 109071207 -36518081 - AluJb SINE Alu -14 298 2 288 295 25 102 chr10 109071207 109071398 -36517890 + L2 LINE L2 2722 2884 -430 27 0 0 0 chr10 109071974 109072001 -36517287 + AT_rich Low_complexity Low_complexity 1 27 0 2048 125 3 7 chr10 109072098 109072395 -36516893 + AluSx SINE Alu 1 296 -16 759 184 36 115 chr10 109073434 109073524 -36515764 + L1MC5 LINE L1 7410 7506 -455 1887 138 65 0 chr10 109073524 109073814 -36515474 + AluSx SINE Alu 1 309 -3 2338 87 0 7 chr10 109073814 109074113 -36515175 + AluSc SINE Alu 1 298 -11 759 184 36 115 chr10 109074113 109074156 -36515132 + L1MC5 LINE L1 7505 7550 -411 2201 117 3 10 chr10 109074156 109074463 -36514825 + AluSx SINE Alu 1 305 -7 759 184 36 115 chr10 109074463 109074632 -36514656 + L1MC5 LINE L1 7550 7690 -271 631 280 30 15 chr10 109075087 109075287 -36514001 + MIR SINE MIR 2 204 -58 2063 138 21 9 chr10 109075341 109075675 -36513613 + MER44D DNA MER2_type 1 608 -1 312 278 26 43 chr10 109076545 109076660 -36512628 - L2 LINE L2 -1 3312 3200 252 0 0 0 chr10 109076720 109076748 -36512540 + (A)n Simple_repeat Simple_repeat 1 28 0 2486 64 3 10 chr10 109076811 109077123 -36512165 + AluSg SINE Alu 1 310 0 972 236 91 7 chr10 109077394 109077670 -36511618 + L1M4 LINE L1 3652 3950 -2196 2133 141 3 6 chr10 109077994 109078307 -36510981 - AluSx SINE Alu 0 312 1 749 187 14 0 chr10 109078397 109078536 -36510752 - FLAM_C SINE Alu 0 143 3 2400 61 17 0 chr10 109078585 109078880 -36510408 - AluY SINE Alu -11 300 1 662 57 0 0 chr10 109079129 109079217 -36510071 - Alu SINE Alu 0 311 224 730 205 0 0 chr10 109079398 109079525 -36509763 - FLAM_C SINE Alu -5 128 2 1692 152 4 4 chr10 109079703 109079960 -36509328 + AluSx SINE Alu 1 257 -55 257 191 0 0 chr10 109080271 109080318 -36508970 + AluSx SINE Alu 246 292 -10 1728 155 7 50 chr10 109080711 109081014 -36508274 + AluJb SINE Alu 1 290 -22 1725 131 16 52 chr10 109082777 109083083 -36506205 - AluJb SINE Alu -17 295 1 21 36 0 0 chr10 109083143 109083171 -36506117 + AT_rich Low_complexity Low_complexity 1 28 0 2079 116 3 0 chr10 109083276 109083591 -36505697 - AluJb SINE Alu 0 316 1 1263 258 114 7 chr10 109083645 109084075 -36505213 - LTR33 LTR ERVL 0 521 46 2169 131 0 0 chr10 109084272 109084569 -36504719 + AluSx SINE Alu 1 297 -15 1842 119 34 54 chr10 109084628 109084942 -36504346 - L1MB3 LINE L1 0 6183 5875 1435 181 56 42 chr10 109084942 109085229 -36504059 - AluJb SINE Alu -21 291 1 1842 119 34 54 chr10 109085229 109085267 -36504021 - L1MB3 LINE L1 -308 5875 5838 2251 116 0 7 chr10 109085291 109085592 -36503696 - AluSx SINE Alu -13 299 1 208 224 204 10 chr10 109087594 109087692 -36501596 + MIR3 SINE MIR 86 202 -6 593 78 0 0 chr10 109088187 109088264 -36501024 - AluS SINE Alu -235 77 1 875 240 111 24 chr10 109088999 109089149 -36500139 - L2 LINE L2 -51 3262 3126 180 111 0 0 chr10 109089149 109089176 -36500112 + (TG)n Simple_repeat Simple_repeat 1 27 0 875 240 111 24 chr10 109089176 109089231 -36500057 - L2 LINE L2 -187 3126 3077 2042 138 0 3 chr10 109089231 109089527 -36499761 - AluJb SINE Alu -17 295 1 875 240 111 24 chr10 109089527 109089882 -36499406 - L2 LINE L2 -236 3077 2634 222 227 227 27 chr10 109089849 109089959 -36499329 + MIR SINE MIR 18 149 -59 * 2321 83 3 26 chr10 109090574 109090887 -36498401 - AluSx SINE Alu -6 306 1 552 315 110 63 chr10 109090896 109092072 -36497216 - L1ME3A LINE L1 -304 5866 4747 225 65 0 0 chr10 109092072 109092103 -36497185 + (TA)n Simple_repeat Simple_repeat 1 31 0 1670 174 0 43 chr10 109092103 109092408 -36496880 - AluJb SINE Alu -20 292 1 552 315 110 63 chr10 109092408 109092484 -36496804 - L1ME3A LINE L1 -1422 4748 4548 25 0 0 0 chr10 109092484 109092509 -36496779 + AT_rich Low_complexity Low_complexity 1 25 0 634 100 0 0 chr10 109092521 109092611 -36496677 - AluJo SINE Alu -5 307 218 589 133 53 107 chr10 109092608 109092643 -36496645 - AluJo SINE Alu -161 151 116 * 180 0 0 0 chr10 109092643 109092663 -36496625 + (TTG)n Simple_repeat Simple_repeat 2 21 0 589 133 53 107 chr10 109092663 109092777 -36496511 - AluJo SINE Alu -196 116 10 2088 117 10 10 chr10 109092983 109093290 -36495998 - AluSc SINE Alu -2 307 1 599 299 25 21 chr10 109093290 109093571 -36495717 - L1ME3A LINE L1 -1961 4185 3904 2003 141 0 3 chr10 109094645 109094958 -36494330 + AluJb SINE Alu 1 312 0 650 234 13 32 chr10 109095173 109095327 -36493961 + L2 LINE L2 3162 3312 -1 2185 166 31 107 chr10 109095332 109095598 -36493690 + LTR8 LTR ERV1 1 203 -488 2133 125 0 0 chr10 109095598 109095903 -36493385 + AluSx SINE Alu 1 305 -7 2185 166 31 107 chr10 109095903 109096207 -36493081 + LTR8 LTR ERV1 203 528 -163 1624 89 0 24 chr10 109096207 109096455 -36492833 + AluY SINE Alu 62 303 -8 776 113 0 0 chr10 109096468 109096574 -36492714 + AluSq/x SINE Alu 2 107 -206 1754 67 5 0 chr10 109096793 109097050 -36492238 - AluSc SINE Alu 0 312 55 3885 96 48 7 chr10 109097176 109097762 -36491526 + L1MB3 LINE L1 5572 6181 -2 22 35 0 0 chr10 109098324 109098353 -36490935 + GC_rich Low_complexity Low_complexity 1 29 0 324 48 0 0 chr10 109098541 109098583 -36490705 + (TG)n Simple_repeat Simple_repeat 2 43 0 25 0 0 0 chr10 109098864 109098889 -36490399 + AT_rich Low_complexity Low_complexity 1 25 0 884 155 54 0 chr10 109098895 109099043 -36490245 - AluJo SINE Alu -23 289 134 1938 139 0 7 chr10 109099277 109099578 -36489710 + AluJb SINE Alu 1 299 -13 227 295 21 53 chr10 109099699 109099794 -36489494 + MIR SINE MIR 110 201 -61 627 308 169 9 chr10 109100622 109100960 -36488328 + L2 LINE L2 2502 2893 -421 258 128 0 0 chr10 109101422 109101461 -36487827 + U2 snRNA snRNA 1 39 -149 2179 107 0 7 chr10 109101564 109101873 -36487415 + AluY SINE Alu 2 308 -3 250 143 32 16 chr10 109102182 109102245 -36487043 + CT-rich Low_complexity Low_complexity 1 64 0 786 167 0 15 chr10 109102245 109102377 -36486911 - AluJo SINE Alu -181 131 2 1900 138 6 25 chr10 109102383 109102702 -36486586 - AluSq SINE Alu 0 313 1 473 100 0 0 chr10 109102719 109102789 -36486499 - Alu SINE Alu -1 311 242 1726 167 0 7 chr10 109103151 109103445 -36485843 - AluJb SINE Alu -20 292 1 1442 154 66 29 chr10 109103504 109103649 -36485639 - AluJo SINE Alu -30 282 144 1744 157 0 23 chr10 109103649 109103948 -36485340 - AluSx SINE Alu -12 300 9 288 0 0 0 chr10 109103955 109103987 -36485301 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 1442 154 66 29 chr10 109103987 109104105 -36485183 - AluJo SINE Alu -173 139 1 243 0 0 0 chr10 109104164 109104191 -36485097 + (CAAAA)n Simple_repeat Simple_repeat 4 30 0 347 267 10 83 chr10 109104334 109104482 -36484806 - MIR SINE MIR -32 176 34 1885 127 13 16 chr10 109104577 109104884 -36484404 + AluSx SINE Alu 6 311 -1 580 213 24 39 chr10 109104893 109105020 -36484268 + AluJo SINE Alu 13 137 -175 2511 105 0 0 chr10 109105146 109105497 -36483791 + THE1B-int LTR MaLR 1223 1573 -7 2221 116 54 23 chr10 109105502 109105855 -36483433 + THE1B LTR MaLR 1 364 0 792 103 8 0 chr10 109106843 109106960 -36482328 - FLAM_C SINE Alu -12 131 14 253 248 152 35 chr10 109106960 109107105 -36482183 + MIR SINE MIR 101 262 0 1788 132 22 0 chr10 109107139 109107412 -36481876 + AluSx SINE Alu 28 306 -6 1767 153 0 17 chr10 109107610 109107911 -36481377 - AluJb SINE Alu -15 297 2 2421 72 3 0 chr10 109108037 109108341 -36480947 + AluSp SINE Alu 1 305 -8 2091 113 10 10 chr10 109108343 109108653 -36480635 + AluSx SINE Alu 1 310 -2 5732 189 60 34 chr10 109110776 109110948 -36478340 + Charlie1a DNA MER1_type 3 169 -2592 1701 175 3 0 chr10 109110948 109111245 -36478043 + AluJo SINE Alu 1 298 -14 2057 114 21 0 chr10 109111246 109111536 -36477752 + AluSx SINE Alu 1 296 -16 5732 189 60 34 chr10 109111536 109112718 -36476570 + Charlie1a DNA MER1_type 168 1394 -61 1063 166 0 5 chr10 109112718 109112905 -36476383 + AluJb SINE Alu 121 306 -6 328 88 18 35 chr10 109112907 109112964 -36476324 + Charlie1a DNA MER1_type 1369 1424 -31 1882 135 6 13 chr10 109112965 109113276 -36476012 + AluJo SINE Alu 1 309 -3 1857 145 3 3 chr10 109113916 109114220 -36475068 + AluSq SINE Alu 1 304 -9 282 298 4 0 chr10 109114232 109114369 -36474919 + FRAM/FAM SINE Alu 3 71 -104 810 119 63 0 chr10 109114537 109114663 -36474625 - FRAM SINE Alu -8 168 35 1244 189 75 21 chr10 109114814 109115095 -36474193 - AluJb SINE Alu -16 296 1 2226 78 7 3 chr10 109115113 109115409 -36473879 + AluSp SINE Alu 1 297 -16 550 248 0 39 chr10 109115720 109115873 -36473415 + MIR SINE MIR 8 154 -108 573 226 194 14 chr10 109115907 109116124 -36473164 - MIR SINE MIR 0 262 7 244 232 54 0 chr10 109116132 109116188 -36473100 + MIR SINE MIR 204 262 0 294 273 212 0 chr10 109117659 109117758 -36471530 + L2 LINE L2 3192 3311 -2 208 402 11 11 chr10 109118185 109118272 -36471016 - MIR SINE MIR -156 106 20 22 0 0 0 chr10 109118507 109118529 -36470759 + AT_rich Low_complexity Low_complexity 1 22 0 640 205 31 0 chr10 109118612 109118739 -36470549 - AluSg/x SINE Alu -4 308 178 2352 64 3 10 chr10 109118853 109119165 -36470123 - AluSg SINE Alu 0 310 1 340 322 99 35 chr10 109119229 109119431 -36469857 + L2 LINE L2 3098 3312 -1 2049 138 21 9 chr10 109120301 109120635 -36468653 - MER44D DNA MER2_type -1 608 1 712 280 30 15 chr10 109120689 109120889 -36468399 - MIR SINE MIR -58 204 2 510 207 39 96 chr10 109121344 109121513 -36467775 - L1MC5 LINE L1 -271 7690 7534 2079 117 3 10 chr10 109121513 109121820 -36467468 - AluSx SINE Alu -7 305 1 510 207 39 96 chr10 109121820 109121858 -36467430 - L1MC5 LINE L1 -427 7534 7495 2173 88 0 7 chr10 109121863 109122158 -36467130 - AluSc SINE Alu -11 298 6 1737 152 16 23 chr10 109122162 109122472 -36466816 - AluJb SINE Alu -4 308 1 2188 112 0 10 chr10 109122645 109122958 -36466330 - AluSg SINE Alu 0 310 1 299 292 42 0 chr10 109123134 109123254 -36466034 - HAL1b LINE L1 -7 1341 1217 733 306 137 22 chr10 109123263 109123629 -36465659 + L2 LINE L2 2367 2774 -540 1892 170 0 0 chr10 109123636 109123948 -36465340 + AluJo SINE Alu 1 312 0 948 189 0 0 chr10 109123950 109124125 -36465163 + AluJo/FRAM SINE Alu 131 305 -7 1189 279 41 39 chr10 109124157 109124595 -36464693 + L2 LINE L2 2875 3313 0 255 237 129 29 chr10 109124600 109124739 -36464549 - HAL1b LINE L1 -175 1173 1021 673 173 0 58 chr10 109124753 109124892 -36464396 + FLAM_C SINE Alu 3 133 0 189 0 0 0 chr10 109124935 109124956 -36464332 + (TCTCCC)n Simple_repeat Simple_repeat 6 26 0 186 43 0 0 chr10 109125075 109125098 -36464190 + (CA)n Simple_repeat Simple_repeat 1 23 0 261 0 0 0 chr10 109125183 109125212 -36464076 + (TGAA)n Simple_repeat Simple_repeat 4 32 0 2352 87 0 3 chr10 109125331 109125643 -36463645 - AluSx SINE Alu -1 311 1 6764 60 5 40 chr10 109125679 109126667 -36462621 - SVA Other Other 0 1386 433 967 81 5 33 chr10 109126682 109126893 -36462395 - SVA Other Other -592 794 590 5521 65 26 67 chr10 109126911 109128073 -36461215 - SVA Other Other -518 868 1 2034 113 0 3 chr10 109128193 109128477 -36460811 - AluSx SINE Alu -29 283 1 1496 231 42 64 chr10 109128920 109129554 -36459734 - L2 LINE L2 0 3313 2666 1119 188 82 0 chr10 109129554 109129761 -36459527 + MER58A DNA MER1_type 1 224 0 1496 231 42 64 chr10 109129761 109129938 -36459350 - L2 LINE L2 -647 2666 2526 1337 194 45 39 chr10 109129938 109130248 -36459040 + AluJo SINE Alu 1 312 0 1496 231 42 64 chr10 109130248 109130269 -36459019 - L2 LINE L2 -787 2526 2506 2186 119 0 0 chr10 109130749 109131052 -36458236 + AluSx SINE Alu 1 303 -9 286 345 140 0 chr10 109131791 109131978 -36457310 + MIR SINE MIR 47 261 -1 193 250 150 12 chr10 109132618 109132698 -36456590 + MIR SINE MIR 161 251 -11 2057 110 3 3 chr10 109132979 109133271 -36456017 - AluSx SINE Alu -19 293 2 229 288 15 0 chr10 109133386 109133452 -36455836 + MER5B DNA MER1_type 1 67 -111 1440 166 182 84 chr10 109134287 109134457 -36454831 - MLT1D LTR MaLR -7 498 346 2318 89 3 0 chr10 109134457 109134761 -36454527 - AluSp SINE Alu -8 305 1 1440 166 182 84 chr10 109134761 109135041 -36454247 - MLT1D LTR MaLR -159 346 4 384 322 227 20 chr10 109135253 109135313 -36453975 - L3 LINE CR1 -132 1445 1399 1702 134 0 0 chr10 109135313 109135560 -36453728 - AluSg SINE Alu -63 247 1 384 322 227 20 chr10 109135560 109135896 -36453392 - L3 LINE CR1 -178 1399 967 1573 156 36 0 chr10 109135924 109136199 -36453089 + AluJb SINE Alu 1 285 -27 189 0 0 0 chr10 109136202 109136223 -36453065 + (CAAA)n Simple_repeat Simple_repeat 3 23 0 2455 57 0 0 chr10 109136329 109136628 -36452660 - AluY SINE Alu -12 299 1 1423 165 61 34 chr10 109136657 109136954 -36452334 - AluJo SINE Alu -7 305 1 234 330 106 39 chr10 109137037 109137216 -36452072 + MIR SINE MIR 1 191 -71 2213 96 3 0 chr10 109137319 109137611 -36451677 + AluSg SINE Alu 3 295 -15 1550 159 23 71 chr10 109138045 109138315 -36450973 - AluJb SINE Alu -9 293 38 1886 149 3 3 chr10 109138315 109138617 -36450671 + AluSx SINE Alu 1 302 -10 1550 159 23 71 chr10 109138617 109138654 -36450634 - AluJb SINE Alu -264 38 1 1848 196 50 10 chr10 109138896 109139300 -36449988 - L1MB7 LINE L1 -10 6174 5755 1318 215 66 48 chr10 109139336 109139705 -36449583 - MLT1C LTR MaLR 0 467 89 2141 138 15 6 chr10 109139705 109140045 -36449243 - MER2 DNA MER2_type 0 344 2 1318 215 66 48 chr10 109140045 109140071 -36449217 - MLT1C LTR MaLR -378 89 65 603 156 0 9 chr10 109140119 109140228 -36449060 - L1MB7 LINE L1 -423 5755 5648 1411 186 48 10 chr10 109141083 109141394 -36447894 + L1MC1 LINE L1 6005 6327 -6 192 77 0 0 chr10 109141394 109141420 -36447868 + (GA)n Simple_repeat Simple_repeat 1 26 0 1874 153 17 0 chr10 109141422 109141722 -36447566 - AluJb SINE Alu -7 305 1 1948 120 33 0 chr10 109142587 109142887 -36446401 - AluSx SINE Alu -2 310 1 2194 112 0 10 chr10 109143343 109143656 -36445632 + AluSg SINE Alu 1 310 0 268 127 36 0 chr10 109143685 109143740 -36445548 - AluSq SINE Alu -2 306 250 1918 105 0 0 chr10 109143841 109144099 -36445189 - AluSq SINE Alu -55 258 1 351 114 143 0 chr10 109144100 109144170 -36445118 + L1MB3 LINE L1 6096 6175 -8 234 136 0 0 chr10 109144180 109144224 -36445064 + (A)n Simple_repeat Simple_repeat 1 44 0 846 281 97 28 chr10 109144224 109144512 -36444776 - L2 LINE L2 -411 2903 2596 1620 184 69 3 chr10 109145411 109145699 -36443589 - AluJb SINE Alu -5 307 1 504 132 105 0 chr10 109146100 109146176 -36443112 - FLAM_A SINE Alu -29 113 30 1592 158 0 52 chr10 109146179 109146451 -36442837 - AluJb SINE Alu -33 279 22 1848 125 12 69 chr10 109146540 109146685 -36442603 + AluSx SINE Alu 2 121 -191 2209 108 3 3 chr10 109146685 109146981 -36442307 + AluSx SINE Alu 1 296 -16 1848 125 12 69 chr10 109146981 109147155 -36442133 + AluSx SINE Alu 121 303 -9 2291 101 0 3 chr10 109147227 109147523 -36441765 + AluSx SINE Alu 1 295 -17 485 96 82 0 chr10 109148017 109148090 -36441198 - AluSg/x SINE Alu -16 293 215 1897 117 8 0 chr10 109148266 109148531 -36440757 - AluSx SINE Alu -45 267 1 5115 158 20 52 chr10 109148534 109150222 -36439066 - L1MB3 LINE L1 -3 6180 4549 461 128 12 47 chr10 109150808 109150894 -36438394 + L1MA5A LINE L1 6137 6219 -78 21 0 0 0 chr10 109151096 109151117 -36438171 + AT_rich Low_complexity Low_complexity 1 21 0 407 73 15 44 chr10 109151423 109151491 -36437797 + L1MA5A LINE L1 6216 6281 -16 471 234 69 50 chr10 109151934 109151959 -36437329 - L2 LINE L2 0 3313 3290 1585 180 3 20 chr10 109151959 109152254 -36437034 + AluJb SINE Alu 1 290 -22 471 234 69 50 chr10 109152254 109152502 -36436786 - L2 LINE L2 -23 3290 2961 4247 141 16 30 chr10 109152523 109152992 -36436296 + L1MB3 LINE L1 5362 5819 -364 2396 85 3 0 chr10 109152992 109153285 -36436003 + AluSp SINE Alu 6 299 -14 4247 141 16 30 chr10 109153285 109153554 -36435734 + L1MB3 LINE L1 5819 6090 -93 637 94 0 0 chr10 109153561 109153646 -36435642 - AluSg/x SINE Alu -18 292 208 418 115 16 0 chr10 109153747 109153808 -36435480 + MER105 DNA DNA 31 92 -112 2240 154 110 56 chr10 109153809 109154421 -36434867 + LTR29 LTR ERV1 1 595 0 239 262 12 48 chr10 109154564 109154648 -36434640 - L2 LINE L2 -250 3063 2983 524 148 0 0 chr10 109154673 109154754 -36434534 + AluJ/FRAM SINE Alu 220 300 -12 237 375 118 0 chr10 109154765 109154901 -36434387 - L2 LINE L2 -342 2971 2820 1046 180 0 0 chr10 109154901 109155062 -36434226 + FAM SINE Alu 1 161 -14 2326 104 0 13 chr10 109155082 109155391 -36433897 - AluSx SINE Alu -7 305 1 2322 84 3 16 chr10 109156263 109156571 -36432717 - AluSq SINE Alu -9 304 1 1326 134 0 5 chr10 109156911 109157097 -36432191 + AluSx SINE Alu 1 185 -127 1887 121 0 0 chr10 109157455 109157711 -36431577 + AluSx SINE Alu 46 301 -11 2196 124 0 6 chr10 109157715 109158029 -36431259 + AluSp SINE Alu 1 312 -1 900 116 103 0 chr10 109158030 109158185 -36431103 + L1MA6 LINE L1 6129 6299 -1 1231 147 11 11 chr10 109158398 109158456 -36430832 - AluJo SINE Alu -121 191 134 2511 56 0 13 chr10 109158456 109158758 -36430530 - AluY SINE Alu -13 298 1 1231 147 11 11 chr10 109158758 109158890 -36430398 - AluJo SINE Alu -177 135 1 1351 180 29 4 chr10 109158890 109159135 -36430153 - MER57A-int LTR ERV1 -1462 6075 5825 2387 91 0 25 chr10 109159144 109159464 -36429824 - AluSx SINE Alu 0 312 1 2445 84 7 3 chr10 109159645 109159954 -36429334 - AluSq SINE Alu -3 310 1 1621 157 7 65 chr10 109159989 109160295 -36428993 - AluJo SINE Alu -24 288 1 2214 118 0 10 chr10 109160297 109160601 -36428687 - AluSg SINE Alu -9 301 1 2412 200 22 70 chr10 109160604 109160689 -36428599 - MER57A-int LTR ERV1 -6975 562 475 2217 84 11 0 chr10 109160689 109160973 -36428315 - AluSp SINE Alu -26 287 1 2412 200 22 70 chr10 109160973 109161477 -36427811 - MER57A-int LTR ERV1 -7062 475 1 2109 161 56 26 chr10 109161477 109161497 -36427791 - MER57A LTR ERV1 0 403 385 2284 99 0 16 chr10 109161497 109161637 -36427651 + AluSq SINE Alu 1 142 -171 2387 71 0 0 chr10 109161637 109161919 -36427369 + AluY SINE Alu 14 295 -16 2284 99 0 16 chr10 109161919 109162082 -36427206 + AluSq SINE Alu 142 299 -14 2109 161 56 26 chr10 109162082 109162452 -36426836 - MER57A LTR ERV1 -18 385 1 532 164 34 240 chr10 109162456 109162664 -36426624 + MER21B LTR ERV1 6 170 -693 1388 141 8 27 chr10 109162677 109162939 -36426349 + MER52A LTR ERV1 1 257 -1498 452 209 9 29 chr10 109164101 109164206 -36425082 - U13 snRNA snRNA 0 104 2 1959 162 0 3 chr10 109164246 109164548 -36424740 - AluJb SINE Alu -11 301 1 492 296 145 0 chr10 109164777 109164955 -36424333 - MLT1K LTR MaLR -72 516 313 1430 140 40 14 chr10 109164955 109165391 -36423897 - LTR54 LTR ERV1 0 510 1 329 274 168 0 chr10 109165423 109165518 -36423770 - MLT1K LTR MaLR -338 250 140 640 135 31 0 chr10 109165594 109165690 -36423598 + AluSq/x SINE Alu 40 138 -174 1848 168 3 7 chr10 109165810 109166102 -36423186 + AluJo SINE Alu 1 291 -21 2618 65 0 0 chr10 109166124 109166434 -36422854 + AluY SINE Alu 1 310 -1 456 196 43 0 chr10 109166434 109166526 -36422762 + MER57-int LTR ERV1 664 759 -6778 2056 133 0 17 chr10 109166530 109166824 -36422464 + AluSx SINE Alu 1 289 -23 207 0 0 0 chr10 109166827 109166850 -36422438 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2130 140 3 0 chr10 109166908 109167216 -36422072 + AluSx SINE Alu 1 309 -3 1661 183 15 0 chr10 109167294 109167567 -36421721 + AluJo SINE Alu 24 300 -12 217 167 62 0 chr10 109167571 109167619 -36421669 + GA-rich Low_complexity Low_complexity 2 52 0 719 218 201 84 chr10 109167734 109168212 -36421076 - LTR1B LTR ERV1 -237 589 56 2026 134 35 20 chr10 109168219 109168587 -36420701 - MER4E LTR ERV1 -90 676 180 558 118 47 0 chr10 109168597 109168682 -36420606 - MER4E LTR ERV1 -575 204 116 937 173 6 0 chr10 109168682 109168850 -36420438 + MER57-int LTR ERV1 3157 3325 -3006 983 200 28 110 chr10 109168850 109168882 -36420406 + LTR8A LTR ERV1 1 34 -693 2003 130 14 14 chr10 109168882 109169014 -36420274 + AluSx SINE Alu 1 132 -180 2401 85 0 0 chr10 109169014 109169307 -36419981 + AluSg SINE Alu 1 293 -17 2003 130 14 14 chr10 109169307 109169466 -36419822 + AluSx SINE Alu 131 292 -20 983 200 28 110 chr10 109169466 109169723 -36419565 + LTR8A LTR ERV1 34 266 -461 791 221 68 12 chr10 109169728 109169891 -36419397 - FAM SINE Alu 0 175 4 24 0 0 0 chr10 109169894 109169918 -36419370 + AT_rich Low_complexity Low_complexity 1 24 0 1998 169 148 0 chr10 109169929 109170302 -36418986 - MSTA LTR MaLR 0 428 1 1768 166 95 50 chr10 109170375 109170797 -36418491 + LTR8A LTR ERV1 287 727 0 493 222 28 0 chr10 109170872 109170980 -36418308 + MER57-int LTR ERV1 3354 3464 -2867 1697 137 23 0 chr10 109171093 109171356 -36417932 - AluSx SINE Alu -6 306 38 1734 151 3 112 chr10 109171456 109171599 -36417689 + MER7A DNA MER2_type 15 172 -2866 2388 90 3 3 chr10 109171599 109171900 -36417388 + AluSx SINE Alu 1 301 -11 1734 151 3 112 chr10 109171900 109172121 -36417167 + MER7A DNA MER2_type 172 337 -9 1240 167 116 50 chr10 109172133 109172360 -36416928 + MER2 DNA MER2_type 7 262 -83 1426 175 88 39 chr10 109172360 109172645 -36416643 - AluJb SINE Alu -13 299 1 1240 167 116 50 chr10 109172645 109172735 -36416553 + MER2 DNA MER2_type 262 345 0 390 300 159 25 chr10 109173383 109173877 -36415411 - L2 LINE L2 -169 3103 2557 440 281 8 8 chr10 109174340 109174461 -36414827 + MIR SINE MIR 20 140 -122 1909 145 40 0 chr10 109174483 109174780 -36414508 + AluJb SINE Alu 1 309 -3 333 33 33 33 chr10 109174783 109174843 -36414445 + (GAAAA)n Simple_repeat Simple_repeat 1 60 0 3109 161 21 92 chr10 109174853 109175018 -36414270 - LTR8 LTR ERV1 0 691 516 2421 82 0 9 chr10 109175018 109175333 -36413955 - AluSx SINE Alu 0 312 1 3109 161 21 92 chr10 109175333 109175910 -36413378 - LTR8 LTR ERV1 -175 516 1 1047 98 0 0 chr10 109176134 109176277 -36413011 + AluSg/x SINE Alu 168 310 -2 424 202 11 11 chr10 109176437 109176526 -36412762 - L1MCa LINE L1 -6167 259 171 2488 123 21 43 chr10 109176778 109177265 -36412023 - MER4A LTR ERV1 0 664 123 504 0 0 0 chr10 109177265 109177321 -36411967 + (TTA)n Simple_repeat Simple_repeat 2 57 0 2488 123 21 43 chr10 109177321 109177413 -36411875 - MER4A LTR ERV1 -541 123 30 6496 115 38 55 chr10 109177423 109177800 -36411488 - MER4A-int LTR ERV1 0 6598 6216 1891 141 0 0 chr10 109177800 109178070 -36411218 - AluSx SINE Alu -2 310 41 6496 115 38 55 chr10 109178070 109178890 -36410398 - MER4A-int LTR ERV1 -382 6216 5422 410 157 36 36 chr10 109178892 109178975 -36410313 + AluJo SINE Alu 98 180 -132 1381 104 11 0 chr10 109179078 109179260 -36410028 + AluSg/x SINE Alu 113 296 -16 1746 161 10 17 chr10 109179515 109179807 -36409481 - AluJb SINE Alu -22 290 1 282 245 314 0 chr10 109179968 109180127 -36409161 + MIR SINE MIR 6 214 -48 308 106 0 0 chr10 109180139 109180186 -36409102 - MER39B LTR ERV1 -50 603 557 2229 96 0 21 chr10 109180186 109180519 -36408769 - AluSp SINE Alu 0 327 1 1784 153 14 3 chr10 109180546 109180840 -36408448 - MER39B LTR ERV1 -87 566 270 319 27 0 0 chr10 109180840 109180877 -36408411 - MER39B LTR ERV1 -354 299 263 227 103 26 0 chr10 109180879 109180918 -36408370 + CT-rich Low_complexity Low_complexity 3 42 0 267 32 0 0 chr10 109180918 109180949 -36408339 - MER39B LTR ERV1 -360 293 263 240 143 0 0 chr10 109180950 109180992 -36408296 + (TCC)n Simple_repeat Simple_repeat 2 43 0 1237 142 46 126 chr10 109180999 109181136 -36408152 - AluJo SINE Alu -30 282 136 2197 122 0 0 chr10 109181136 109181431 -36407857 - AluSx SINE Alu -17 295 1 2308 93 3 3 chr10 109181432 109181732 -36407556 - AluSx SINE Alu -12 300 1 1237 142 46 126 chr10 109181732 109181894 -36407394 - AluJo SINE Alu -175 137 5 234 204 20 0 chr10 109181918 109181967 -36407321 - MER39B LTR ERV1 -380 273 224 570 207 161 32 chr10 109182413 109182630 -36406658 - MIR SINE MIR -13 249 5 2289 115 0 0 chr10 109183215 109183510 -36405778 + AluSx SINE Alu 3 297 -15 1983 162 0 3 chr10 109183548 109183856 -36405432 + AluJb SINE Alu 1 307 -5 766 135 14 71 chr10 109184416 109184557 -36404731 + FLAM_A SINE Alu 1 133 0 2359 93 3 0 chr10 109185572 109185872 -36403416 + AluSq SINE Alu 1 301 -12 921 172 133 13 chr10 109186022 109186255 -36403033 + MIR SINE MIR 2 262 0 180 0 0 0 chr10 109186463 109186483 -36402805 + (TA)n Simple_repeat Simple_repeat 2 21 0 2099 138 0 0 chr10 109186483 109186780 -36402508 - AluSx SINE Alu -15 297 1 2037 98 70 3 chr10 109186947 109187233 -36402055 + AluSg SINE Alu 1 305 -5 1839 139 7 14 chr10 109188008 109188288 -36401000 + AluJb SINE Alu 11 288 -24 201 200 40 20 chr10 109188314 109188364 -36400924 + MIR3 SINE MIR 137 187 -21 2496 69 0 0 chr10 109188716 109189019 -36400269 - AluY SINE Alu -8 303 1 22 0 0 0 chr10 109189551 109189573 -36399715 + AT_rich Low_complexity Low_complexity 1 22 0 258 301 48 0 chr10 109189876 109189959 -36399329 + MIR SINE MIR 30 116 -146 22 35 0 0 chr10 109189966 109189995 -36399293 + AT_rich Low_complexity Low_complexity 1 29 0 615 130 0 0 chr10 109190012 109190112 -36399176 + (TTCC)n Simple_repeat Simple_repeat 1 100 0 2241 72 18 0 chr10 109190123 109190400 -36398888 - AluSp SINE Alu -23 290 9 2178 112 24 0 chr10 109190422 109190716 -36398572 - AluSx SINE Alu -11 301 1 243 244 0 0 chr10 109191243 109191288 -36398000 + MER66A LTR ERV1 290 334 -144 1004 150 0 0 chr10 109191325 109191478 -36397810 - AluSg/x SINE Alu -6 306 154 380 138 0 0 chr10 109191478 109191536 -36397752 - AluS SINE Alu -250 58 1 1972 142 0 14 chr10 109192339 109192635 -36396653 + AluJb SINE Alu 1 292 -20 320 303 99 6 chr10 109192663 109192825 -36396463 + L2 LINE L2 3117 3293 -20 218 243 0 0 chr10 109192909 109192946 -36396342 - L2 LINE L2 -88 3184 3148 271 304 101 40 chr10 109193014 109193241 -36396047 - L2 LINE L2 -162 3110 2870 274 265 167 11 chr10 109193810 109194074 -36395214 - L2 LINE L2 -185 3128 2824 1947 55 0 4 chr10 109194108 109194344 -36394944 - AluY SINE Alu -1 310 76 337 269 150 0 chr10 109194460 109194620 -36394668 - HAL1b LINE L1 -528 820 637 919 126 0 15 chr10 109194866 109195001 -36394287 - FLAM_C SINE Alu 0 133 1 3493 129 30 7 chr10 109195036 109195596 -36393692 + L1MA7 LINE L1 5652 6224 -67 2274 108 13 3 chr10 109195932 109196237 -36393051 + AluSc SINE Alu 1 308 -1 576 223 218 44 chr10 109196604 109196833 -36392455 - MLT1J LTR MaLR 0 511 243 1216 181 7 48 chr10 109196847 109197117 -36392171 - AluJo SINE Alu -20 292 34 1906 184 27 19 chr10 109197679 109198316 -36390972 + L1MB8 LINE L1 5462 6178 0 435 243 68 0 chr10 109198320 109198423 -36390865 - MLT1J LTR MaLR -306 205 96 1705 221 0 0 chr10 109198837 109199149 -36390139 - AluJb SINE Alu 0 312 1 2089 142 3 3 chr10 109199212 109199523 -36389765 - AluSx SINE Alu 0 312 2 312 328 43 0 chr10 109200513 109200629 -36388659 + L2 LINE L2 3168 3288 -25 389 253 0 0 chr10 109201142 109201229 -36388059 + HsTC2 DNA Tc2 1 87 -1811 1560 148 90 161 chr10 109201481 109201744 -36387544 - L1MB7 LINE L1 -7 6177 5884 542 145 0 0 chr10 109201744 109201827 -36387461 - AluJ/FLAM SINE Alu -229 83 1 1560 148 90 161 chr10 109201827 109202027 -36387261 - L1MB7 LINE L1 -300 5884 5671 3827 94 4 4 chr10 109202033 109202544 -36386744 - MER9 LTR ERVK 0 511 1 507 175 0 48 chr10 109202549 109202652 -36386636 - AluSc SINE Alu -98 211 114 2732 179 74 22 chr10 109202752 109203264 -36386024 - L1MB7 LINE L1 -572 5602 5118 2564 108 0 40 chr10 109203264 109203643 -36385645 + THE1B LTR MaLR 1 364 0 2732 179 74 22 chr10 109203643 109204058 -36385230 - L1MB7 LINE L1 -1056 5118 4623 1596 171 24 38 chr10 109204449 109204741 -36384547 + AluJb SINE Alu 4 291 -21 29 0 0 0 chr10 109204745 109204774 -36384514 + AT_rich Low_complexity Low_complexity 1 29 0 353 281 160 37 chr10 109204902 109205283 -36384005 + L1ME4a LINE L1 5511 5938 -183 1539 174 16 69 chr10 109205290 109205595 -36383693 + AluJo SINE Alu 1 289 -23 3052 166 81 101 chr10 109205637 109206362 -36382926 - MER50 LTR ERV1 -23 711 1 1881 155 0 30 chr10 109206516 109206819 -36382469 + AluJo SINE Alu 1 294 -18 1819 171 4 0 chr10 109207689 109207969 -36381319 - AluJo SINE Alu -31 281 1 1727 140 88 0 chr10 109207975 109208247 -36381041 - AluJb SINE Alu -16 296 1 2222 102 37 35 chr10 109208717 109209091 -36380197 - THE1C LTR MaLR 0 375 1 317 340 6 36 chr10 109209113 109209275 -36380013 - MIR SINE MIR -65 143 38 2088 93 4 4 chr10 109209437 109209705 -36379583 + AluSq SINE Alu 1 268 -45 379 62 0 46 chr10 109209709 109209774 -36379514 + AluSp/q SINE Alu 240 301 -2 237 65 0 0 chr10 109209914 109209945 -36379343 + (CA)n Simple_repeat Simple_repeat 2 32 0 2027 112 0 0 chr10 109210206 109210466 -36378822 - AluSq SINE Alu -53 260 1 210 71 0 0 chr10 109210907 109210935 -36378353 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 744 275 18 9 chr10 109211577 109211806 -36377482 + MIR SINE MIR 25 255 -7 228 267 12 81 chr10 109211831 109211917 -36377371 - L2 LINE L2 -21 3292 3213 244 231 0 0 chr10 109211963 109212015 -36377273 - L2 LINE L2 -78 3235 3184 487 157 26 78 chr10 109212224 109212339 -36376949 + MLT1D LTR MaLR 1 109 -517 1920 138 7 3 chr10 109212339 109212621 -36376667 + AluJo SINE Alu 1 283 -29 1295 173 31 24 chr10 109212621 109212869 -36376419 + MLT1D LTR MaLR 256 505 0 219 247 49 25 chr10 109213239 109213320 -36375968 - MIR SINE MIR -158 104 22 428 186 9 0 chr10 109213503 109213616 -36375672 + GA-rich Low_complexity Low_complexity 1 114 0 2295 118 3 0 chr10 109213793 109214099 -36375189 + AluSx SINE Alu 1 307 -5 234 324 76 36 chr10 109214255 109214505 -36374783 + L2 LINE L2 2996 3255 -58 561 252 111 13 chr10 109214643 109214869 -36374419 + L2 LINE L2 2084 2331 -983 1785 160 16 23 chr10 109214940 109215246 -36374042 - AluJb SINE Alu -8 304 1 2312 112 0 10 chr10 109215419 109215732 -36373556 - AluSg SINE Alu 0 310 1 299 292 42 0 chr10 109215908 109216028 -36373260 - HAL1b LINE L1 -7 1341 1217 658 279 166 17 chr10 109216102 109216403 -36372885 + L2 LINE L2 2429 2774 -540 1955 160 0 0 chr10 109216410 109216692 -36372596 + AluJo SINE Alu 1 282 -30 886 205 0 11 chr10 109216713 109216898 -36372390 + AluJo SINE Alu 122 304 -8 1034 279 41 39 chr10 109216931 109217369 -36371919 + L2 LINE L2 2875 3313 0 271 237 129 29 chr10 109217374 109217513 -36371775 - HAL1b LINE L1 -175 1173 1021 670 173 0 58 chr10 109217527 109217666 -36371622 + FLAM_C SINE Alu 3 133 0 254 271 29 0 chr10 109217816 109217886 -36371402 + AluSc SINE Alu 226 297 -2 2109 130 111 51 chr10 109217930 109218069 -36371219 - MER4A LTR ERV1 -4 461 332 1926 125 179 16 chr10 109218069 109218437 -36370851 - MSTA LTR MaLR 0 428 1 2109 130 111 51 chr10 109218437 109218867 -36370421 - MER4A LTR ERV1 -133 332 1 799 178 0 22 chr10 109219054 109219189 -36370099 + FLAM_C SINE Alu 1 132 -1 413 272 96 68 chr10 109219304 109219395 -36369893 + MIR SINE MIR 2 89 -173 1629 168 18 4 chr10 109219395 109219569 -36369719 - AluJb SINE Alu 0 307 126 369 0 0 0 chr10 109219569 109219610 -36369678 + (TTTA)n Simple_repeat Simple_repeat 3 43 0 1629 168 18 4 chr10 109219610 109219738 -36369550 - AluJb SINE Alu -181 126 1 413 272 96 68 chr10 109219738 109219895 -36369393 + MIR SINE MIR 89 258 -4 423 0 0 0 chr10 109219896 109219943 -36369345 + (TAA)n Simple_repeat Simple_repeat 3 49 0 385 187 120 0 chr10 109219957 109220032 -36369256 - AluJ/FLAM SINE Alu -218 84 1 201 74 0 0 chr10 109220062 109220089 -36369199 + (TC)n Simple_repeat Simple_repeat 1 27 0 750 189 0 0 chr10 109220089 109220221 -36369067 - FLAM_C SINE Alu -1 132 1 1688 186 3 14 chr10 109220229 109220520 -36368768 - AluJo SINE Alu -24 288 1 655 254 108 12 chr10 109220520 109220760 -36368528 - LTR33A LTR ERVL -40 483 221 499 358 99 26 chr10 109220953 109221181 -36368107 - L2 LINE L2 -1672 1642 1432 2393 91 0 0 chr10 109221181 109221479 -36367809 - AluSx SINE Alu -14 298 1 499 358 99 26 chr10 109221479 109221823 -36367465 - L2 LINE L2 -1882 1432 1028 1606 144 57 33 chr10 109221838 109222137 -36367151 - AluJo SINE Alu -6 306 1 348 242 74 91 chr10 109222247 109222683 -36366605 - L1MCc LINE L1 -5641 781 11 416 176 0 0 chr10 109222735 109222803 -36366485 + AluJo SINE Alu 1 68 -244 807 239 22 13 chr10 109222966 109223196 -36366092 + AluJo SINE Alu 71 302 -10 1080 244 141 81 chr10 109223571 109224077 -36365211 + MLT1G LTR MaLR 11 588 0 1507 116 168 0 chr10 109224157 109224407 -36364881 + AluJb SINE Alu 6 297 -15 376 181 62 12 chr10 109224409 109224569 -36364719 + (TA)n Simple_repeat Simple_repeat 1 168 0 855 146 0 29 chr10 109224980 109225117 -36364171 + FLAM_C SINE Alu 1 133 0 1597 133 118 11 chr10 109225235 109225540 -36363748 + AluJo SINE Alu 1 312 0 2597 139 40 18 chr10 109225603 109226049 -36363239 + MLT1C LTR MaLR 10 465 -2 234 0 0 0 chr10 109227111 109227137 -36362151 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1738 104 9 0 chr10 109227216 109227447 -36361841 + AluSq SINE Alu 3 235 -78 1608 221 108 78 chr10 109227509 109228110 -36361178 + MER21B LTR ERV1 96 714 -149 244 269 108 21 chr10 109228451 109228544 -36360744 + L1MC/D LINE L1 5564 5664 -2144 230 182 36 36 chr10 109228567 109228622 -36360666 - L2 LINE L2 0 3272 3218 185 337 30 10 chr10 109228771 109228872 -36360416 - L2 LINE L2 -216 3056 2954 772 170 0 15 chr10 109228906 109229041 -36360247 + FLAM_C SINE Alu 1 133 0 315 179 0 0 chr10 109229204 109229260 -36360028 + AluSq SINE Alu 244 299 -2 5742 154 20 23 chr10 109229260 109229310 -36359978 + L1MC1 LINE L1 5323 5372 -961 1492 206 60 26 chr10 109229310 109229693 -36359595 + MSTD LTR MaLR 1 396 0 5742 154 20 23 chr10 109229693 109229916 -36359372 + L1MC1 LINE L1 5372 5594 -739 1597 181 56 3 chr10 109229916 109230204 -36359084 - AluJo SINE Alu -9 303 1 5742 154 20 23 chr10 109230204 109230938 -36358350 + L1MC1 LINE L1 5594 6328 -5 340 191 0 29 chr10 109231024 109231044 -36358244 - MER46A DNA MER2_type -74 162 145 1856 137 17 7 chr10 109231044 109231337 -36357951 + MER46B DNA MER2_type 1 171 -65 565 223 45 50 chr10 109231340 109231542 -36357746 + AluSx SINE Alu 2 202 -110 295 316 45 28 chr10 109231576 109231823 -36357465 + Tigger3(Golem) DNA MER2_type 15 265 -2764 855 127 0 0 chr10 109231937 109232055 -36357233 - AluSx SINE Alu -137 175 58 2248 155 48 19 chr10 109233171 109233604 -36355684 + L1MB4 LINE L1 5734 6179 -1 242 129 0 97 chr10 109234767 109234829 -36354459 - L1MC4 LINE L1 -1339 6703 6648 2481 70 7 0 chr10 109234832 109235132 -36354156 - AluSg SINE Alu -8 302 1 2003 145 3 3 chr10 109235714 109236018 -36353270 + AluSx SINE Alu 1 304 -8 3862 162 96 29 chr10 109236649 109236717 -36352571 - L1MB7 LINE L1 -5 6179 6117 2273 100 0 22 chr10 109236717 109237036 -36352252 - AluSx SINE Alu 0 312 1 3862 162 96 29 chr10 109237036 109237704 -36351584 - L1MB7 LINE L1 -67 6117 5377 2646 37 0 0 chr10 109237704 109238002 -36351286 - AluY SINE Alu -13 298 1 3862 162 96 29 chr10 109238002 109238104 -36351184 - L1MB7 LINE L1 -807 5377 5283 2399 85 0 0 chr10 109238247 109238541 -36350747 - AluSg SINE Alu -16 294 1 314 270 0 111 chr10 109238544 109238670 -36350618 + L2 LINE L2 3153 3264 -8 469 271 32 37 chr10 109239155 109239343 -36349945 - LTR16A LTR ERVL -239 211 25 273 269 183 0 chr10 109239698 109239802 -36349486 + MIR SINE MIR 51 173 -89 1007 104 0 0 chr10 109240189 109240314 -36348974 - AluSq/x SINE Alu -183 129 5 26 0 0 0 chr10 109240328 109240354 -36348934 + AT_rich Low_complexity Low_complexity 1 26 0 2366 107 0 3 chr10 109240504 109240814 -36348474 - AluSg SINE Alu -1 309 1 205 163 61 0 chr10 109241183 109241232 -36348056 - MIR SINE MIR -129 133 82 21 57 0 0 chr10 109242501 109242536 -36346752 + AT_rich Low_complexity Low_complexity 1 35 0 775 144 64 0 chr10 109245131 109245256 -36344032 - AluJo SINE Alu -178 134 2 763 219 39 19 chr10 109245257 109245412 -36343876 - FRAM SINE Alu -7 159 2 414 314 25 6 chr10 109246741 109246921 -36342367 + MER20 DNA MER1_type 34 219 0 2663 32 0 6 chr10 109247902 109248215 -36341073 - AluYa5 SINE Alu 0 311 1 751 294 3 24 chr10 109248415 109248704 -36340584 + AluJo SINE Alu 1 283 -19 544 309 151 3 chr10 109249600 109249917 -36339371 + L1ME LINE L1 127 490 -5715 419 347 81 27 chr10 109249938 109250235 -36339053 + L1ME LINE L1 1401 1722 -854 3092 269 104 47 chr10 109250528 109252352 -36336936 + L1ME LINE L1 2133 3851 -2382 2075 156 0 0 chr10 109252352 109252641 -36336647 + AluJb SINE Alu 1 289 -23 3092 269 104 47 chr10 109252641 109254264 -36335024 + L1ME LINE L1 3851 5730 -503 930 224 65 32 chr10 109254264 109254572 -36334716 - MER5C DNA MER1_type -5 319 2 231 273 13 13 chr10 109254604 109254681 -36334607 + L1ME LINE L1 5745 5821 -418 26 30 0 0 chr10 109255049 109255082 -36334206 + AT_rich Low_complexity Low_complexity 1 33 0 244 287 32 14 chr10 109255897 109255990 -36333298 - MIR SINE MIR -62 146 81 489 245 122 27 chr10 109256103 109256250 -36333038 - MER91A DNA MER1_type -3 193 33 693 155 0 0 chr10 109256532 109256648 -36332640 + Tigger4(Zombi) DNA MER2_type 2616 2731 0 314 366 24 8 chr10 109256666 109256789 -36332499 + L3 LINE CR1 1441 1565 -12 2525 66 0 3 chr10 109256985 109257286 -36332002 - AluY SINE Alu -11 300 1 2003 131 3 3 chr10 109257333 109257623 -36331665 - AluSq SINE Alu -20 293 4 2045 141 0 31 chr10 109257737 109258056 -36331232 + AluJb SINE Alu 1 309 -3 2302 99 0 13 chr10 109260281 109260584 -36328704 - AluSq SINE Alu -14 299 1 304 125 0 171 chr10 109260762 109260850 -36328438 + LTR9 LTR ERV1 457 529 -83 1587 141 0 0 chr10 109261390 109261640 -36327648 + AluJo SINE Alu 55 304 0 33 0 0 0 chr10 109261949 109261982 -36327306 + AT_rich Low_complexity Low_complexity 1 33 0 645 318 52 43 chr10 109262084 109262433 -36326855 - L2 LINE L2 -611 2703 2352 1632 197 10 17 chr10 109263011 109263311 -36325977 - AluJo SINE Alu -14 298 1 373 325 39 10 chr10 109263546 109263749 -36325539 + L1ME LINE L1 5529 5737 -384 590 289 45 8 chr10 109264011 109264365 -36324923 + L1MC/D LINE L1 5283 5582 -580 525 239 93 19 chr10 109264865 109265070 -36324218 + MER112 DNA MER1_type 1 220 -40 228 35 0 0 chr10 109266330 109266359 -36322929 + (GA)n Simple_repeat Simple_repeat 2 30 0 2514 178 65 2 chr10 109266680 109267187 -36322101 + MER68 LTR ERV1 1 539 -23 28 48 0 0 chr10 109267311 109267353 -36321935 + AT_rich Low_complexity Low_complexity 1 42 0 189 373 114 20 chr10 109267878 109268079 -36321209 - L2 LINE L2 -542 2772 2553 212 256 47 23 chr10 109268184 109268270 -36321018 - MIR SINE MIR -112 150 63 2215 118 3 0 chr10 109268380 109268676 -36320612 + AluSx SINE Alu 1 297 -15 777 115 0 18 chr10 109270053 109270166 -36319122 + MER5A DNA MER1_type 1 111 -78 426 254 102 0 chr10 109270229 109270347 -36318941 - MIR SINE MIR -14 248 119 494 177 21 0 chr10 109270368 109270464 -36318824 + L1MC1 LINE L1 6236 6333 0 2283 121 0 0 chr10 109270998 109271296 -36317992 - AluSx SINE Alu -14 298 1 221 298 0 0 chr10 109271845 109271892 -36317396 - L2 LINE L2 -89 3183 3137 201 39 0 0 chr10 109271923 109271949 -36317339 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 2181 114 10 0 chr10 109273053 109273351 -36315937 - AluSx SINE Alu -11 301 1 316 97 48 16 chr10 109273746 109273808 -36315480 - Alu SINE Alu -235 64 1 24 61 0 0 chr10 109273816 109273849 -36315439 + AT_rich Low_complexity Low_complexity 1 33 0 940 120 0 0 chr10 109274191 109274324 -36314964 - FLAM_C SINE Alu 0 133 1 282 390 9 0 chr10 109274395 109274500 -36314788 - MIR3 SINE MIR -42 166 61 1579 112 32 18 chr10 109278734 109279011 -36310277 - MER1B DNA MER1_type -58 281 1 1034 187 98 35 chr10 109280322 109280638 -36308650 - MER46C DNA MER2_type -1 337 2 1107 161 6 6 chr10 109281674 109281848 -36307440 - FAM SINE Alu 0 49 1 2073 147 10 0 chr10 109281869 109282169 -36307119 - AluJb SINE Alu -9 303 1 2226 114 3 0 chr10 109283685 109283975 -36305313 + AluSx SINE Alu 1 291 -21 452 254 198 28 chr10 109284870 109285087 -36304201 - MIR SINE MIR 0 262 9 317 222 11 44 chr10 109287161 109287251 -36302037 - MIR SINE MIR -70 192 106 1130 135 0 0 chr10 109287795 109287951 -36301337 - AluSg/x SINE Alu -20 292 137 2287 108 3 7 chr10 109290156 109290462 -36298826 - AluSx SINE Alu -7 305 1 2520 66 3 0 chr10 109291168 109291473 -36297815 + AluY SINE Alu 1 306 -5 555 284 44 12 chr10 109291902 109292152 -36297136 + L1MB8 LINE L1 5921 6178 0 371 254 93 93 chr10 109292538 109292743 -36296545 + MIR3 SINE MIR 1 205 -3 2459 70 0 0 chr10 109292854 109293154 -36296134 - AluY SINE Alu -11 300 1 459 114 0 14 chr10 109293387 109293457 -36295831 + MER1B DNA MER1_type 271 339 0 3343 144 25 29 chr10 109293467 109294152 -36295136 + L1MB8 LINE L1 4621 5302 -844 324 153 139 28 chr10 109294161 109294233 -36295055 + AluSc SINE Alu 103 182 -117 22 56 0 0 chr10 109294244 109294280 -36295008 + AT_rich Low_complexity Low_complexity 1 36 0 858 166 13 0 chr10 109294525 109294682 -36294606 + L1MB8 LINE L1 5620 5778 -400 237 209 0 146 chr10 109294682 109294792 -36294496 + AluJo SINE Alu 33 126 -176 1340 170 27 98 chr10 109294807 109295142 -36294146 + AluJo SINE Alu 1 311 -1 1233 132 16 16 chr10 109295163 109295327 -36293961 + AluJo SINE Alu 120 286 -26 1919 176 13 18 chr10 109295327 109295725 -36293563 + L1MB8 LINE L1 5770 6165 -13 1233 132 16 16 chr10 109295725 109295749 -36293539 + AluJo SINE Alu 285 308 -4 1421 112 0 52 chr10 109295754 109295986 -36293302 + AluSq SINE Alu 1 220 -93 2024 119 0 0 chr10 109295986 109296254 -36293034 - AluSx SINE Alu -35 277 10 2042 142 10 3 chr10 109297132 109297442 -36291846 - AluSx SINE Alu 0 312 1 601 157 126 47 chr10 109297443 109297542 -36291746 - L1MC4 LINE L1 -867 7175 7085 387 60 0 0 chr10 109297542 109297592 -36291696 + (CA)n Simple_repeat Simple_repeat 1 50 0 601 157 126 47 chr10 109297592 109297683 -36291605 - L1MC4 LINE L1 -957 7085 6970 634 210 65 117 chr10 109297686 109297725 -36291563 + L1MC4 LINE L1 7575 7614 -428 1701 167 41 24 chr10 109297725 109298018 -36291270 + AluJb SINE Alu 1 298 -14 634 210 65 117 chr10 109298018 109298287 -36291001 + L1MC4 LINE L1 7614 7867 -175 324 0 0 0 chr10 109299539 109299575 -36289713 + (CCTAA)n Simple_repeat Simple_repeat 2 37 0 1507 83 0 0 chr10 109299651 109299843 -36289445 + AluSq SINE Alu 1 192 -121 368 113 0 0 chr10 109299843 109299896 -36289392 + AluSq SINE Alu 241 293 -8 448 300 70 53 chr10 109300227 109300470 -36288818 + MIR SINE MIR 13 259 -3 1679 101 0 4 chr10 109300675 109300903 -36288385 - AluSg/x SINE Alu -10 302 76 2092 131 0 3 chr10 109301097 109301402 -36287886 + AluSx SINE Alu 1 304 -8 720 85 19 19 chr10 109301884 109301990 -36287298 - AluSq/x SINE Alu -205 107 2 645 154 94 17 chr10 109302631 109302748 -36286540 + AluJo SINE Alu 11 136 -176 2224 118 3 10 chr10 109305713 109306027 -36283261 + AluSp SINE Alu 1 312 -1 1328 162 0 5 chr10 109306038 109306248 -36283040 + MLT1A1 LTR MaLR 157 365 0 1010 172 11 11 chr10 109307458 109307632 -36281656 - MER5B DNA MER1_type -3 175 2 313 339 83 63 chr10 109308311 109308691 -36280597 + L2 LINE L2 2814 3206 -66 2077 109 0 4 chr10 109308691 109308965 -36280323 + AluSx SINE Alu 26 298 -14 313 339 83 63 chr10 109308965 109309027 -36280261 + L2 LINE L2 3206 3265 -7 1742 168 3 20 chr10 109310282 109310580 -36278708 + AluJb SINE Alu 1 293 -19 546 123 0 0 chr10 109311720 109311793 -36277495 + AluJo SINE Alu 125 197 -115 211 305 0 34 chr10 109313527 109313586 -36275702 - L2 LINE L2 -2 3270 3214 572 131 12 0 chr10 109313969 109314053 -36275235 - AluSg/x SINE Alu -11 299 215 180 111 0 0 chr10 109314053 109314080 -36275208 + (CACCC)n Simple_repeat Simple_repeat 5 31 0 5889 124 97 49 chr10 109315014 109315303 -36273985 + Tigger3b DNA MER2_type 1 275 -2753 2417 82 0 0 chr10 109315303 109315597 -36273691 + AluY SINE Alu 1 294 -17 5889 124 97 49 chr10 109315597 109315884 -36273404 + Tigger3b DNA MER2_type 275 547 -2481 2168 120 6 22 chr10 109315884 109316201 -36273087 + AluJb SINE Alu 1 312 0 5889 124 97 49 chr10 109316201 109316557 -36272731 + Tigger3b DNA MER2_type 547 884 -2144 2493 81 7 0 chr10 109316557 109316866 -36272422 - AluSx SINE Alu -1 311 1 5889 124 97 49 chr10 109316866 109317104 -36272184 + Tigger3b DNA MER2_type 884 1230 -1 1740 144 43 37 chr10 109317235 109317534 -36271754 - AluJb SINE Alu -11 301 1 2183 88 3 20 chr10 109317570 109317865 -36271423 - AluSx SINE Alu -22 290 1 966 200 44 0 chr10 109318513 109318693 -36270595 - MER58A DNA MER1_type 0 224 37 25 83 0 0 chr10 109319019 109319079 -36270209 + AT_rich Low_complexity Low_complexity 1 60 0 486 251 96 12 chr10 109319121 109319288 -36270000 - MIR SINE MIR -26 236 56 1412 128 5 0 chr10 109319308 109319503 -36269785 + AluJo SINE Alu 23 218 -94 278 125 0 36 chr10 109319503 109319559 -36269729 + FAM SINE Alu 125 178 -1 231 348 29 0 chr10 109319591 109319660 -36269628 + MER5A DNA MER1_type 116 186 -3 250 325 217 6 chr10 109319671 109319837 -36269451 + MIR SINE MIR 23 223 -39 2073 203 116 47 chr10 109319837 109320016 -36269272 + MLT1F1 LTR MaLR 1 166 -401 225 0 0 0 chr10 109320016 109320041 -36269247 + (TC)n Simple_repeat Simple_repeat 1 25 0 2073 203 116 47 chr10 109320041 109320368 -36268920 + MLT1F1 LTR MaLR 166 542 -25 2055 108 40 4 chr10 109320391 109320669 -36268619 - AluSq SINE Alu -25 288 1 3590 166 11 23 chr10 109320709 109320787 -36268501 - L1MB3 LINE L1 -8 6175 6098 1968 159 3 3 chr10 109320787 109321082 -36268206 - AluJb SINE Alu -17 295 1 3590 166 11 23 chr10 109321082 109321667 -36267621 - L1MB3 LINE L1 -85 6098 5520 644 143 76 0 chr10 109323216 109323335 -36265953 + L1MB3 LINE L1 6056 6183 0 236 242 75 58 chr10 109324014 109324134 -36265154 - MIR SINE MIR -18 244 123 2223 86 3 13 chr10 109324305 109324609 -36264679 + AluSx SINE Alu 1 301 -11 321 68 0 0 chr10 109324929 109324973 -36264315 + (CA)n Simple_repeat Simple_repeat 1 44 0 30 27 0 0 chr10 109325426 109325463 -36263825 + GC_rich Low_complexity Low_complexity 1 37 0 1936 131 24 7 chr10 109325811 109326102 -36263186 - AluJb SINE Alu -15 297 2 2081 118 0 3 chr10 109327126 109327435 -36261853 - AluSq SINE Alu 0 313 4 296 221 70 35 chr10 109327477 109327563 -36261725 + MIR SINE MIR 103 191 -71 269 333 54 0 chr10 109327918 109328011 -36261277 + L2 LINE L2 3143 3240 -32 2300 101 10 0 chr10 109328352 109328650 -36260638 - AluSq SINE Alu -12 301 1 1546 179 3 44 chr10 109328800 109329119 -36260169 + AluJo SINE Alu 1 306 -6 434 283 72 0 chr10 109329613 109329765 -36259523 + MIR SINE MIR 48 210 -52 645 236 95 54 chr10 109330822 109330928 -36258360 + MIR SINE MIR 1 101 -161 1070 177 20 15 chr10 109330928 109331131 -36258157 - MER3 DNA MER1_type -4 205 2 645 236 95 54 chr10 109331131 109331266 -36258022 + MIR SINE MIR 101 252 -10 1970 144 3 13 chr10 109332040 109332346 -36256942 - AluJo SINE Alu -9 303 1 2095 104 17 7 chr10 109332433 109332745 -36256543 + AluSg SINE Alu 2 310 0 41 58 0 0 chr10 109333507 109333576 -36255712 + AT_rich Low_complexity Low_complexity 1 69 0 2294 95 0 7 chr10 109333592 109333887 -36255401 - AluSx SINE Alu -19 293 1 2297 108 3 7 chr10 109334587 109334893 -36254395 + AluSx SINE Alu 1 305 -7 2260 108 7 0 chr10 109335297 109335593 -36253695 + AluSg SINE Alu 1 298 -12 2356 73 10 32 chr10 109336939 109337253 -36252035 - AluSg1 SINE Alu -2 307 1 1849 161 62 9 chr10 109337500 109337824 -36251464 - MSTD LTR MaLR 0 396 56 2413 96 0 0 chr10 109338330 109338631 -36250657 + AluSx SINE Alu 1 301 -11 3223 191 24 21 chr10 109338901 109339582 -36249706 + L1MB7 LINE L1 5489 6171 -13 302 254 93 93 chr10 109339977 109340182 -36249106 + MIR3 SINE MIR 1 205 -3 2495 70 0 0 chr10 109340293 109340593 -36248695 - AluY SINE Alu -11 300 1 2045 115 0 14 chr10 109340598 109340884 -36248404 - AluSx SINE Alu -18 294 13 2120 133 3 0 chr10 109340964 109341258 -36248030 - AluSg SINE Alu -15 295 1 480 192 0 0 chr10 109341489 109341567 -36247721 + L1M4 LINE L1 5489 5566 -608 296 295 70 66 chr10 109343443 109343551 -36245737 + L1MC/D LINE L1 5375 5481 -2327 2104 130 0 3 chr10 109343551 109343851 -36245437 + AluSx SINE Alu 1 299 -13 296 295 70 66 chr10 109343851 109343986 -36245302 + L1MC/D LINE L1 5481 5619 -2189 2149 129 0 3 chr10 109345521 109345824 -36243464 - AluSx SINE Alu -10 302 1 304 286 0 0 chr10 109346529 109346613 -36242675 + L1MC5 LINE L1 7817 7900 -61 1663 151 14 29 chr10 109346635 109346914 -36242374 + AluJo SINE Alu 34 308 -4 2945 159 24 29 chr10 109346914 109347444 -36241844 - L1MB7 LINE L1 -280 5904 5376 2653 59 0 0 chr10 109347444 109347749 -36241539 - AluY SINE Alu -6 305 1 2945 159 24 29 chr10 109347749 109347797 -36241491 - L1MB7 LINE L1 -808 5376 5329 1896 71 0 0 chr10 109348160 109348384 -36240904 + AluY SINE Alu 69 292 -19 24 0 0 0 chr10 109348464 109348488 -36240800 + AT_rich Low_complexity Low_complexity 1 24 0 2427 88 3 10 chr10 109348491 109348799 -36240489 + AluSg SINE Alu 1 306 -4 664 140 73 0 chr10 109348820 109348956 -36240332 - L1MA8 LINE L1 -1 6290 6145 1048 176 6 0 chr10 109348957 109349122 -36240166 - FAM SINE Alu -9 166 1 2087 84 30 20 chr10 109349809 109350108 -36239180 - AluSg SINE Alu -8 302 1 873 87 79 0 chr10 109351175 109351301 -36237987 + AluJb SINE Alu 1 136 -176 2306 98 0 16 chr10 109351301 109351438 -36237850 + AluSx SINE Alu 1 139 -173 1835 128 4 4 chr10 109351438 109351719 -36237569 + AluSx SINE Alu 20 300 -12 2306 98 0 16 chr10 109351719 109351898 -36237390 + AluSx SINE Alu 139 312 0 580 121 44 0 chr10 109352834 109352925 -36236363 + AluY SINE Alu 95 189 -122 2270 87 0 19 chr10 109353226 109353536 -36235752 - AluSc SINE Alu -5 304 1 1901 124 3 3 chr10 109353900 109354183 -36235105 + AluSq SINE Alu 7 289 -24 723 115 0 0 chr10 109354509 109354613 -36234675 + U6 snRNA snRNA 1 104 -3 2185 104 0 0 chr10 109354859 109355157 -36234131 + AluSg SINE Alu 1 298 -12 2208 99 0 10 chr10 109355823 109356136 -36233152 + AluSg SINE Alu 1 310 0 2216 102 0 0 chr10 109356452 109356756 -36232532 - AluSx SINE Alu -3 309 6 229 318 14 122 chr10 109358425 109358573 -36230715 - L2 LINE L2 -2 3270 3139 611 129 0 0 chr10 109358867 109358952 -36230336 - AluSg/x SINE Alu -11 301 217 180 111 0 0 chr10 109358952 109358979 -36230309 + (CACCC)n Simple_repeat Simple_repeat 5 31 0 6011 121 98 44 chr10 109359913 109360202 -36229086 + Tigger3b DNA MER2_type 1 273 -2755 2312 78 0 0 chr10 109360202 109360496 -36228792 + AluY SINE Alu 1 294 -17 6011 121 98 44 chr10 109360496 109360777 -36228511 + Tigger3b DNA MER2_type 273 537 -2491 2020 116 6 25 chr10 109360777 109361095 -36228193 + AluJb SINE Alu 1 312 0 6011 121 98 44 chr10 109361095 109361451 -36227837 + Tigger3b DNA MER2_type 537 872 -2156 2363 81 7 0 chr10 109361451 109361760 -36227528 - AluSx SINE Alu -1 311 1 6011 121 98 44 chr10 109361760 109361998 -36227290 + Tigger3b DNA MER2_type 872 1230 -1 1649 141 43 37 chr10 109362129 109362428 -36226860 - AluJb SINE Alu -11 301 1 2124 71 3 20 chr10 109362464 109362759 -36226529 - AluSx SINE Alu -22 290 1 290 44 0 22 chr10 109362763 109362808 -36226480 + (TTTTG)n Simple_repeat Simple_repeat 1 44 0 820 21 0 0 chr10 109362809 109362906 -36226382 - AluSg/x SINE Alu -36 276 180 395 281 164 0 chr10 109362921 109363049 -36226239 + L2 LINE L2 3160 3308 -5 198 0 0 0 chr10 109363087 109363109 -36226179 + (A)n Simple_repeat Simple_repeat 1 22 0 324 0 0 0 chr10 109363850 109363886 -36225402 + (CCTAA)n Simple_repeat Simple_repeat 2 37 0 1715 85 158 8 chr10 109363962 109364221 -36225067 + AluSq SINE Alu 1 298 -5 456 268 74 59 chr10 109364240 109364350 -36224938 - L1MC4 LINE L1 -71 7971 7864 1851 66 111 7 chr10 109364350 109364621 -36224667 + AluSc SINE Alu 1 299 -10 456 268 74 59 chr10 109364621 109364931 -36224357 - L1MC4 LINE L1 -178 7864 7545 1581 151 3 48 chr10 109365063 109365374 -36223914 + AluJo SINE Alu 1 297 -15 1834 145 54 8 chr10 109365617 109365923 -36223365 + L1MA4 LINE L1 4230 4557 -1589 1871 67 0 30 chr10 109365923 109366192 -36223096 + AluY SINE Alu 50 310 -1 1834 145 54 8 chr10 109366192 109366257 -36223031 + L1MA4 LINE L1 4557 4618 -1528 1555 160 50 4 chr10 109366267 109366529 -36222759 + MER1B DNA MER1_type 1 274 -65 253 0 26 26 chr10 109366573 109366611 -36222677 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 2177 48 0 21 chr10 109366613 109366903 -36222385 - AluY SINE Alu -27 284 1 497 114 0 14 chr10 109367135 109367205 -36222083 + MER1B DNA MER1_type 271 339 0 3602 144 25 29 chr10 109367215 109367900 -36221388 + L1MA4 LINE L1 4621 5302 -844 458 209 86 75 chr10 109367909 109368020 -36221268 + AluJb SINE Alu 105 220 -92 1740 145 7 7 chr10 109368020 109368302 -36220986 - AluSx SINE Alu -30 282 1 458 209 86 75 chr10 109368302 109368377 -36220911 + AluJb SINE Alu 220 293 -19 5676 127 32 7 chr10 109368384 109369334 -36219954 + L1MA4 LINE L1 5324 6296 -4 293 125 71 0 chr10 109369348 109369404 -36219884 + L1MD3 LINE L1 7929 7988 -7 2281 90 0 3 chr10 109369493 109369792 -36219496 + AluSx SINE Alu 1 298 -14 1379 187 54 0 chr10 109369928 109370206 -36219082 + AluJo SINE Alu 6 298 -14 310 320 98 27 chr10 109370210 109370466 -36218822 - L2 LINE L2 -508 2806 2533 5190 86 40 74 chr10 109372230 109372277 -36217011 + SVA Other Other 5 52 -1336 1211 0 0 53 chr10 109372277 109372466 -36216822 + (TCTCCC)n Simple_repeat Simple_repeat 2 180 0 5190 86 40 74 chr10 109372466 109373769 -36215519 + SVA Other Other 52 868 -520 6109 60 30 61 chr10 109373786 109374764 -36214524 + SVA Other Other 433 1379 -7 1442 171 20 43 chr10 109374765 109375064 -36214224 + AluJo SINE Alu 21 312 0 379 326 23 0 chr10 109375252 109375384 -36213904 + MIR SINE MIR 19 153 -109 1043 78 0 0 chr10 109375396 109375525 -36213763 + AluSg SINE Alu 3 131 -179 296 183 23 145 chr10 109375527 109375581 -36213707 + MIR SINE MIR 148 178 -84 1839 68 19 23 chr10 109375581 109375847 -36213441 + AluSp SINE Alu 44 308 -5 296 183 23 145 chr10 109375847 109375923 -36213365 + MIR SINE MIR 178 262 0 2178 79 7 7 chr10 109377345 109377636 -36211652 + AluSg1 SINE Alu 1 291 -18 339 25 0 0 chr10 109377647 109377687 -36211601 + (CA)n Simple_repeat Simple_repeat 2 41 0 363 361 65 38 chr10 109377767 109378531 -36210757 + L2 LINE L2 1317 2101 -1213 23 0 0 0 chr10 109378732 109378755 -36210533 + AT_rich Low_complexity Low_complexity 1 23 0 306 343 154 15 chr10 109378839 109379236 -36210052 + L2 LINE L2 2153 2604 -710 670 151 57 0 chr10 109379309 109379415 -36209873 - FLAM_C SINE Alu -29 114 3 1967 116 0 17 chr10 109379545 109379838 -36209450 + AluSq SINE Alu 16 303 -10 259 266 31 0 chr10 109379838 109379902 -36209386 - Charlie8 DNA MER1_type -992 1425 1360 * 883 266 65 46 chr10 109379900 109380268 -36209020 - Charlie8 DNA MER1_type -1926 491 117 552 167 147 0 chr10 109380335 109380437 -36208851 + AluJo/FLAM SINE Alu 2 118 -184 1914 144 3 0 chr10 109380440 109380732 -36208556 - AluSx SINE Alu -19 293 1 30 0 0 0 chr10 109380732 109380762 -36208526 + AT_rich Low_complexity Low_complexity 1 30 0 582 125 0 0 chr10 109380947 109381035 -36208253 + FLAM_C SINE Alu 56 143 0 1930 102 29 32 chr10 109381181 109381494 -36207794 - AluSx SINE Alu 0 312 1 1863 137 0 23 chr10 109383639 109383939 -36205349 - AluSx SINE Alu -19 293 1 1882 176 58 6 chr10 109385088 109385212 -36204076 + MLT1A1 LTR MaLR 1 117 -248 2125 107 3 0 chr10 109385212 109385511 -36203777 + AluSp SINE Alu 14 313 0 1882 176 58 6 chr10 109385511 109385733 -36203555 + MLT1A1 LTR MaLR 117 365 0 1009 172 11 11 chr10 109386943 109387117 -36202171 - MER5B DNA MER1_type -3 175 2 427 334 78 84 chr10 109387489 109388176 -36201112 + L2 LINE L2 2507 3204 -68 1962 109 0 4 chr10 109388176 109388450 -36200838 + AluSx SINE Alu 26 298 -14 427 334 78 84 chr10 109388450 109388512 -36200776 + L2 LINE L2 3204 3265 -7 1628 168 3 20 chr10 109389767 109390065 -36199223 + AluJb SINE Alu 1 293 -19 1079 129 0 43 chr10 109391205 109391391 -36197897 + AluSg/x SINE Alu 123 300 -9 2165 112 3 3 chr10 109391391 109391696 -36197592 + AluSx SINE Alu 1 305 -7 2138 107 10 3 chr10 109391696 109392004 -36197284 + AluSq SINE Alu 1 311 -2 393 22 0 0 chr10 109393644 109393690 -36195598 + (TG)n Simple_repeat Simple_repeat 1 46 0 349 299 136 7 chr10 109393720 109393867 -36195421 - MIR SINE MIR -60 202 37 249 33 0 0 chr10 109394873 109394903 -36194385 + (TTA)n Simple_repeat Simple_repeat 2 31 0 1988 107 0 31 chr10 109394909 109395198 -36194090 - AluSx SINE Alu -32 280 1 1390 205 10 7 chr10 109396465 109396758 -36192530 - L1MC4 LINE L1 -484 7558 7265 428 129 0 0 chr10 109396803 109396865 -36192423 - AluSp SINE Alu -39 274 213 4642 123 163 24 chr10 109396865 109397851 -36191437 - MER11B LTR ERVK 0 1236 9 1530 112 9 5 chr10 109397851 109398075 -36191213 - AluSp SINE Alu -88 225 1 589 157 126 47 chr10 109398076 109398175 -36191113 - L1MC4 LINE L1 -867 7175 7085 369 62 0 0 chr10 109398175 109398223 -36191065 + (CA)n Simple_repeat Simple_repeat 1 48 0 589 157 126 47 chr10 109398223 109398314 -36190974 - L1MC4 LINE L1 -957 7085 6970 1117 217 45 111 chr10 109398317 109398356 -36190932 + L1MC4 LINE L1 7575 7615 -427 1586 167 41 24 chr10 109398356 109398649 -36190639 + AluJb SINE Alu 1 298 -14 1117 217 45 111 chr10 109398649 109398938 -36190350 + L1MC4 LINE L1 7615 7862 -180 198 71 0 0 chr10 109398938 109398966 -36190322 + (TG)n Simple_repeat Simple_repeat 1 28 0 1117 217 45 111 chr10 109398966 109399130 -36190158 + L1MC4 LINE L1 7862 8035 -7 2253 65 34 0 chr10 109399133 109399425 -36189863 - AluSp SINE Alu -11 302 1 1775 169 36 7 chr10 109400423 109400725 -36188563 - AluJo SINE Alu 0 312 2 496 178 225 16 chr10 109400788 109400917 -36188371 + MIR SINE MIR 5 160 -102 2300 108 0 6 chr10 109401041 109401355 -36187933 - AluSx SINE Alu 0 312 1 414 91 0 0 chr10 109401788 109401843 -36187445 - MER5A DNA MER1_type -10 179 125 1167 162 107 9 chr10 109401843 109402059 -36187229 + AluJb SINE Alu 1 237 -75 189 0 0 0 chr10 109402065 109402086 -36187202 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 467 188 73 10 chr10 109402105 109402201 -36187087 - MER5A DNA MER1_type -87 102 1 1906 162 16 3 chr10 109402521 109402829 -36186459 + AluJb SINE Alu 1 312 0 574 235 145 35 chr10 109403070 109403270 -36186018 - MIR SINE MIR -11 251 30 238 333 83 0 chr10 109403314 109403341 -36185947 + L3 LINE CR1 1305 1328 -249 1639 173 0 7 chr10 109403341 109403619 -36185669 + AluJb SINE Alu 25 300 -12 238 333 83 0 chr10 109403619 109403699 -36185589 + L3 LINE CR1 1328 1421 -156 335 279 92 56 chr10 109404145 109404278 -36185010 - MIR SINE MIR 0 262 135 2279 121 0 0 chr10 109404278 109404576 -36184712 - AluSq SINE Alu -15 298 1 335 279 92 56 chr10 109404576 109404693 -36184595 - MIR SINE MIR -127 135 3 403 237 49 145 chr10 109404988 109405220 -36184068 + L1MB8 LINE L1 5677 5884 -294 32 57 0 0 chr10 109405304 109405357 -36183931 + AT_rich Low_complexity Low_complexity 1 53 0 252 272 112 24 chr10 109405754 109405923 -36183365 + MLT1K LTR MaLR 403 586 -2 1721 161 3 21 chr10 109405993 109406317 -36182971 + AluJb SINE Alu 1 319 0 214 315 0 0 chr10 109406505 109406559 -36182729 + (CA)n Simple_repeat Simple_repeat 2 55 0 2047 109 6 65 chr10 109406650 109406972 -36182316 - AluSx SINE Alu -9 303 1 662 167 92 17 chr10 109409937 109410057 -36179231 - AluJo SINE Alu -176 136 8 1394 113 10 10 chr10 109410694 109410888 -36178400 + AluSx SINE Alu 1 194 -118 483 63 0 0 chr10 109410888 109410951 -36178337 + (GGAA)n Simple_repeat Simple_repeat 2 64 0 1005 9 0 0 chr10 109410951 109411065 -36178223 + (GGGAA)n Simple_repeat Simple_repeat 2 115 0 228 67 0 0 chr10 109411119 109411149 -36178139 + (TTTTA)n Simple_repeat Simple_repeat 1 30 0 888 19 0 0 chr10 109411149 109411252 -36178036 - L1PA8 LINE L1 -24 6148 6046 * 1886 93 4 14 chr10 109411251 109411531 -36177757 - L1PA8 LINE L1 -51 6121 5845 22 0 0 0 chr10 109411567 109411589 -36177699 + AT_rich Low_complexity Low_complexity 1 22 0 391 301 122 58 chr10 109412043 109412114 -36177174 + L2 LINE L2 3107 3172 -100 2190 117 7 0 chr10 109412114 109412412 -36176876 - AluSp SINE Alu -13 300 1 391 301 122 58 chr10 109412412 109412496 -36176792 + L2 LINE L2 3172 3272 0 1554 157 70 60 chr10 109412623 109412746 -36176542 - Charlie1 DNA MER1_type 0 2761 2641 1857 157 0 7 chr10 109412746 109413063 -36176225 + AluJb SINE Alu 1 315 0 1554 157 70 60 chr10 109413063 109413199 -36176089 - Charlie1 DNA MER1_type -120 2641 2508 1945 169 7 0 chr10 109413199 109413501 -36175787 + AluJo SINE Alu 1 304 -8 1554 157 70 60 chr10 109413501 109413730 -36175558 - Charlie1 DNA MER1_type -253 2508 7 2261 113 10 7 chr10 109413740 109414049 -36175239 + AluSx SINE Alu 1 310 -2 207 260 180 20 chr10 109414296 109414396 -36174892 - MIR3 SINE MIR -85 123 8 2454 94 0 3 chr10 109414452 109414760 -36174528 - AluY SINE Alu -4 307 1 2121 125 3 10 chr10 109414773 109415076 -36174212 - AluSx SINE Alu 0 312 12 356 306 132 51 chr10 109415129 109415364 -36173924 - MIR SINE MIR 0 262 9 251 274 36 12 chr10 109416084 109416168 -36173120 + MIR SINE MIR 121 206 -56 248 340 42 38 chr10 109416567 109416855 -36172433 + L1MC/D LINE L1 5348 5636 -2172 1638 166 34 59 chr10 109417008 109417122 -36172166 + AluJo SINE Alu 1 116 -336 2247 96 0 7 chr10 109417122 109417431 -36171857 + AluSg SINE Alu 4 310 0 1638 166 34 59 chr10 109417431 109417775 -36171513 + AluJo SINE Alu 116 452 0 606 71 0 0 chr10 109417792 109417876 -36171412 + (GGAA)n Simple_repeat Simple_repeat 1 84 0 1461 180 88 0 chr10 109417894 109418185 -36171103 + AluJb SINE Alu 1 314 0 1505 71 0 0 chr10 109418187 109418370 -36170918 + AluSq SINE Alu 10 192 -121 348 113 0 0 chr10 109418370 109418423 -36170865 + AluSq SINE Alu 242 294 -8 539 315 67 47 chr10 109418742 109418996 -36170292 + MIR SINE MIR 1 259 -3 975 163 34 34 chr10 109419171 109419200 -36170088 - L1MA6 LINE L1 -1 6299 6271 2337 99 0 0 chr10 109419200 109419502 -36169786 - AluSx SINE Alu -10 302 1 975 163 34 34 chr10 109419502 109419681 -36169607 - L1MA6 LINE L1 -28 6272 6091 2523 146 43 18 chr10 109419739 109419753 -36169535 - L1MC1 LINE L1 0 6333 6321 2204 116 0 0 chr10 109419753 109420061 -36169227 - AluSx SINE Alu 0 308 1 2523 146 43 18 chr10 109420061 109420490 -36168798 - L1MC1 LINE L1 -12 6321 5878 313 319 43 0 chr10 109420648 109420742 -36168546 - MIR SINE MIR -164 98 1 895 214 52 22 chr10 109420993 109421222 -36168066 - MER106A DNA MER1_type 0 236 1 656 258 115 32 chr10 109421730 109421947 -36167341 - MIR SINE MIR -26 236 2 581 316 47 27 chr10 109422109 109422445 -36166843 + L2 LINE L2 2717 3054 -218 313 338 0 0 chr10 109422465 109422545 -36166743 + L3 LINE CR1 1018 1097 -480 472 324 141 14 chr10 109422593 109422806 -36166482 - MIR SINE MIR -22 240 1 187 263 45 113 chr10 109422807 109422940 -36166348 + L3 LINE CR1 1160 1283 -294 349 278 96 81 chr10 109423069 109423278 -36166010 + L3 LINE CR1 1361 1572 -5 2162 78 20 34 chr10 109424521 109424814 -36164474 - AluSx SINE Alu -18 294 6 216 272 10 48 chr10 109426305 109426408 -36162880 + G-rich Low_complexity Low_complexity 5 103 0 1815 145 3 63 chr10 109427466 109427797 -36161491 + AluJb SINE Alu 1 311 -1 4217 170 30 8 chr10 109427797 109428584 -36160704 + L1MA6 LINE L1 5496 6300 0 1689 152 74 3 chr10 109428610 109428893 -36160395 + AluJb SINE Alu 1 303 -9 2411 94 0 0 chr10 109431004 109431301 -36157987 + AluSx SINE Alu 1 297 -15 250 290 110 44 chr10 109431314 109431518 -36157770 + MIR SINE MIR 47 256 -6 2301 61 41 7 chr10 109431810 109432105 -36157183 - AluY SINE Alu -6 305 1 2597 59 3 0 chr10 109432422 109432727 -36156561 + AluY SINE Alu 1 306 -5 1994 138 41 0 chr10 109432991 109433282 -36156006 - AluJb SINE Alu -9 303 1 2274 86 17 3 chr10 109433311 109433602 -36155686 + AluSp SINE Alu 3 297 -16 234 136 0 0 chr10 109433762 109433806 -36155482 + (A)n Simple_repeat Simple_repeat 1 44 0 490 175 48 0 chr10 109433965 109434068 -36155220 - L1MB7 LINE L1 -1 6183 6076 2383 82 3 0 chr10 109434073 109434367 -36154921 - AluSq SINE Alu -18 295 1 373 298 130 25 chr10 109434835 109435120 -36154168 - LTR16B LTR ERVL -14 450 136 30 0 0 0 chr10 109436769 109436799 -36152489 + AT_rich Low_complexity Low_complexity 1 30 0 2262 129 3 0 chr10 109437593 109437902 -36151386 + AluSg SINE Alu 1 310 0 2054 119 0 0 chr10 109438780 109439048 -36150240 + AluSx SINE Alu 10 277 -35 1449 116 0 52 chr10 109439048 109439280 -36150008 - AluSq SINE Alu -93 220 1 1975 176 12 24 chr10 109439293 109439707 -36149581 - L1MB8 LINE L1 0 6178 5770 1191 127 17 12 chr10 109439707 109439871 -36149417 - AluJo SINE Alu -25 287 120 1398 173 18 90 chr10 109439892 109440227 -36149061 - AluJo SINE Alu -1 311 1 242 209 0 146 chr10 109440242 109440352 -36148936 - AluJo SINE Alu -176 126 33 876 166 13 0 chr10 109440352 109440509 -36148779 - L1MB8 LINE L1 -400 5778 5620 1626 130 0 0 chr10 109440774 109440997 -36148291 - AluSg/x SINE Alu -14 296 74 2345 102 0 3 chr10 109441190 109441495 -36147793 + AluSx SINE Alu 1 304 -8 598 242 46 64 chr10 109441985 109442193 -36147095 + MIR SINE MIR 3 206 -56 222 214 124 56 chr10 109445683 109445772 -36143516 + L3b LINE CR1 1262 1356 -227 1630 178 0 7 chr10 109447575 109447850 -36141438 - AluJo SINE Alu -16 296 24 694 142 44 0 chr10 109448811 109448924 -36140364 + FRAM SINE Alu 40 157 -19 663 184 108 19 chr10 109449006 109449164 -36140124 - MIR SINE MIR 0 262 91 2455 78 7 0 chr10 109449236 109449531 -36139757 + AluY SINE Alu 3 299 -12 1176 172 50 18 chr10 109450850 109451071 -36138217 - AluJb SINE Alu -1 311 84 1901 150 13 7 chr10 109452021 109452328 -36136960 + AluJo SINE Alu 1 309 -3 974 101 8 0 chr10 109452961 109453090 -36136198 + AluSq/x SINE Alu 3 132 -181 212 188 0 21 chr10 109453400 109453448 -36135840 + CT-rich Low_complexity Low_complexity 2 48 0 668 138 9 18 chr10 109453578 109453687 -36135601 - FLAM_C SINE Alu 0 143 36 1862 140 7 14 chr10 109453945 109454231 -36135057 - AluJb SINE Alu -28 284 1 2653 10 0 3 chr10 109454257 109454545 -36134743 + AluYb8 SINE Alu 21 307 -11 1982 111 13 60 chr10 109454559 109454874 -36134414 + AluSx SINE Alu 6 305 -7 552 179 241 0 chr10 109456375 109456487 -36132801 + FLAM_C SINE Alu 2 140 -3 182 264 94 0 chr10 109456537 109456590 -36132698 - L2 LINE L2 0 3272 3215 632 223 78 68 chr10 109457684 109457890 -36131398 - MLT1L LTR MaLR -55 560 353 606 151 8 17 chr10 109460226 109460345 -36128943 + MIR SINE MIR 65 182 -80 1905 116 22 0 chr10 109461108 109461376 -36127912 - AluSq SINE Alu -39 274 1 1681 135 53 21 chr10 109461629 109461910 -36127378 - AluJo SINE Alu -22 290 1 2160 113 0 7 chr10 109462341 109462642 -36126646 - AluSx SINE Alu -13 299 1 1066 157 0 0 chr10 109462681 109462847 -36126441 - FRAM SINE Alu -3 173 8 4393 177 48 24 chr10 109463360 109464321 -36124967 + L1MB7 LINE L1 4150 5137 -1009 2213 112 10 0 chr10 109464321 109464625 -36124663 + AluSp SINE Alu 1 307 -6 4393 177 48 24 chr10 109464625 109464653 -36124635 + L1MB7 LINE L1 5137 5163 -983 813 130 65 8 chr10 109464653 109464776 -36124512 - AluJb SINE Alu -16 296 167 3694 167 52 44 chr10 109464781 109464971 -36124317 + L1MB7 LINE L1 5336 5523 -661 940 97 40 0 chr10 109464971 109465095 -36124193 - FLAM_C SINE Alu 0 133 5 3694 167 52 44 chr10 109465095 109465793 -36123495 + L1MB7 LINE L1 5523 6184 0 2244 118 0 0 chr10 109465908 109466205 -36123083 - AluSx SINE Alu -15 297 1 294 243 155 10 chr10 109466482 109466585 -36122703 - MIR SINE MIR -26 236 119 288 0 0 0 chr10 109467628 109467660 -36121628 + (GA)n Simple_repeat Simple_repeat 1 32 0 891 106 0 8 chr10 109467709 109467832 -36121456 - FLAM_C SINE Alu -21 122 1 2009 113 0 70 chr10 109467842 109468170 -36121118 - AluSq SINE Alu -8 305 1 3133 192 26 3 chr10 109468171 109468774 -36120514 - L1MB5 LINE L1 -34 6140 5524 681 330 92 46 chr10 109470047 109470649 -36118639 - L2 LINE L2 -531 2783 2210 2057 132 0 22 chr10 109470649 109470960 -36118328 + AluJb SINE Alu 1 304 -8 681 330 92 46 chr10 109470960 109471003 -36118285 - L2 LINE L2 -1104 2210 2170 2113 118 30 3 chr10 109471003 109471300 -36117988 + AluSx SINE Alu 1 305 -7 681 330 92 46 chr10 109471300 109471417 -36117871 - L2 LINE L2 -1144 2170 1985 271 269 77 10 chr10 109471442 109471546 -36117742 + L1ME LINE L1 5751 5861 -260 336 122 27 4 chr10 109471590 109471655 -36117633 + FLAM_A SINE Alu 2 51 -82 535 115 327 24 chr10 109471802 109471967 -36117321 - Charlie1a DNA MER1_type -1 1454 1240 554 191 0 9 chr10 109472147 109472252 -36117036 + FLAM_A SINE Alu 32 135 -7 428 135 0 14 chr10 109472254 109472328 -36116960 - Charlie1a DNA MER1_type -218 1237 1165 * 3353 190 52 29 chr10 109472321 109473038 -36116250 - Charlie1a DNA MER1_type -722 733 1 247 270 182 41 chr10 109473360 109473508 -36115780 - MIR3 SINE MIR -50 158 20 2304 110 0 0 chr10 109473702 109474001 -36115287 - AluSx SINE Alu -13 299 1 209 269 0 82 chr10 109474029 109474163 -36115125 + CT-rich Low_complexity Low_complexity 1 123 0 736 224 0 0 chr10 109475708 109475842 -36113446 + MER94 DNA DNA 1 134 0 237 229 133 67 chr10 109475880 109475945 -36113343 - MIR SINE MIR -64 198 122 1905 168 7 0 chr10 109475945 109476248 -36113040 + AluJo SINE Alu 1 305 -7 237 229 133 67 chr10 109476248 109476287 -36113001 - MIR SINE MIR -140 122 87 2237 220 33 4 chr10 109476613 109477067 -36112221 + MLT1C LTR MaLR 1 467 0 21 0 0 0 chr10 109477080 109477101 -36112187 + AT_rich Low_complexity Low_complexity 1 21 0 1813 151 32 7 chr10 109477145 109477429 -36111859 - AluJb SINE Alu -21 291 1 206 159 29 29 chr10 109477779 109477848 -36111440 + A-rich Low_complexity Low_complexity 3 71 0 1749 185 64 9 chr10 109478223 109478569 -36110719 - MLT1A1 LTR MaLR 0 365 1 249 324 76 9 chr10 109479723 109479828 -36109460 - L2 LINE L2 -1 3271 3160 2329 113 0 0 chr10 109480017 109480328 -36108960 + AluSq SINE Alu 1 311 -2 1515 135 46 35 chr10 109480328 109480610 -36108678 + L1MC3 LINE L1 7390 7674 -111 24 32 0 0 chr10 109480612 109480643 -36108645 + AT_rich Low_complexity Low_complexity 1 31 0 666 146 10 0 chr10 109480643 109480746 -36108542 - AluSg/x SINE Alu -5 307 204 533 197 41 33 chr10 109480746 109480868 -36108420 + L1MC2 LINE L1 6212 6334 -10 818 201 46 11 chr10 109480883 109481057 -36108231 + L1ME2 LINE L1 5985 6164 0 1028 238 92 25 chr10 109481938 109482253 -36107035 + L1MB7 LINE L1 5783 6118 -66 1882 157 3 3 chr10 109482484 109482777 -36106511 - AluJb SINE Alu -19 293 1 5098 86 12 18 chr10 109482799 109482891 -36106397 + PABL_A LTR ERV1 1 92 -568 1771 126 72 7 chr10 109482891 109483168 -36106120 + AluSx SINE Alu 1 295 -17 5098 86 12 18 chr10 109483168 109483739 -36105549 + PABL_A LTR ERV1 92 660 0 2669 3 0 0 chr10 109484436 109484758 -36104530 - AluYa5 SINE Alu 0 322 1 395 235 93 68 chr10 109484857 109485019 -36104269 - MIR SINE MIR -79 183 18 233 228 73 88 chr10 109485495 109485631 -36103657 - L1MC5 LINE L1 -54 7907 7774 566 143 76 8 chr10 109485670 109485789 -36103499 - L1MA9 LINE L1 -25 6287 6161 4407 153 11 28 chr10 109485819 109486251 -36103037 - L1MA9 LINE L1 -282 6030 5592 2024 145 0 7 chr10 109486251 109486554 -36102734 - AluSx SINE Alu -11 301 1 4407 153 11 28 chr10 109486554 109487018 -36102270 - L1MA9 LINE L1 -720 5592 5150 2167 124 16 3 chr10 109487094 109487400 -36101888 + AluSx SINE Alu 1 310 -2 943 113 53 0 chr10 109487416 109487567 -36101721 + L1MA5A LINE L1 6136 6294 -3 1890 161 0 20 chr10 109487570 109487875 -36101413 + AluSx SINE Alu 1 299 -13 2177 121 0 0 chr10 109487893 109488190 -36101098 - AluSx SINE Alu -12 300 4 239 277 92 34 chr10 109489203 109489322 -36099966 - L2 LINE L2 -815 2499 2374 1793 125 0 0 chr10 109489324 109489564 -36099724 + AluSq SINE Alu 1 240 -73 189 0 0 0 chr10 109489586 109489607 -36099681 + (A)n Simple_repeat Simple_repeat 1 21 0 234 346 69 45 chr10 109489607 109489896 -36099392 - L2 LINE L2 -927 2387 2092 21 0 0 0 chr10 109489897 109489918 -36099370 + AT_rich Low_complexity Low_complexity 1 21 0 1418 195 16 0 chr10 109490793 109491044 -36098244 + AluJo SINE Alu 1 255 -57 202 218 0 36 chr10 109491171 109491226 -36098062 - L2 LINE L2 -2 3270 3218 192 217 203 0 chr10 109491444 109491513 -36097775 - L2 LINE L2 -310 2962 2880 2075 129 10 0 chr10 109491967 109492262 -36097026 + AluSx SINE Alu 1 298 -14 730 178 201 11 chr10 109492830 109493004 -36096284 - MER3 DNA MER1_type 0 209 3 27 65 0 0 chr10 109493564 109493595 -36095693 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr10 109493630 109493659 -36095629 + AT_rich Low_complexity Low_complexity 1 29 0 541 330 71 4 chr10 109493917 109494156 -36095132 + MIR SINE MIR 6 260 -2 183 129 0 0 chr10 109494822 109494853 -36094435 + (A)n Simple_repeat Simple_repeat 1 31 0 2206 126 0 0 chr10 109495629 109495930 -36093358 + AluSx SINE Alu 1 301 -11 1985 152 0 0 chr10 109496115 109496412 -36092876 - AluSg SINE Alu -13 297 1 973 200 44 0 chr10 109497060 109497240 -36092048 - MER58A DNA MER1_type 0 224 37 25 83 0 0 chr10 109497566 109497626 -36091662 + AT_rich Low_complexity Low_complexity 1 60 0 537 246 96 12 chr10 109497668 109497835 -36091453 - MIR SINE MIR -26 236 56 1400 128 5 0 chr10 109497855 109498050 -36091238 + AluJo SINE Alu 23 218 -94 282 125 0 36 chr10 109498050 109498106 -36091182 + FAM SINE Alu 125 178 -1 252 344 22 44 chr10 109498117 109498207 -36091081 + MER5A DNA MER1_type 88 186 -3 298 325 217 6 chr10 109498218 109498384 -36090904 + MIR SINE MIR 23 223 -39 2092 197 118 50 chr10 109498384 109498563 -36090725 + MLT1F1 LTR MaLR 1 166 -401 225 0 0 0 chr10 109498563 109498588 -36090700 + (TC)n Simple_repeat Simple_repeat 1 25 0 2092 197 118 50 chr10 109498588 109498910 -36090378 + MLT1F1 LTR MaLR 166 536 -31 199 0 65 0 chr10 109498910 109498941 -36090347 + (TTTA)n Simple_repeat Simple_repeat 1 33 0 2078 102 0 0 chr10 109498949 109499213 -36090075 - AluSq SINE Alu -49 264 1 3848 164 10 22 chr10 109499245 109499330 -36089958 - L1MB3 LINE L1 -1 6182 6097 1950 159 3 3 chr10 109499330 109499625 -36089663 - AluJb SINE Alu -17 295 1 3848 164 10 22 chr10 109499625 109500210 -36089078 - L1MB3 LINE L1 -86 6097 5520 695 134 76 0 chr10 109501759 109501878 -36087410 + L1MB3 LINE L1 6056 6183 0 285 242 73 57 chr10 109502557 109502681 -36086607 - MIR SINE MIR -18 244 119 1978 112 7 7 chr10 109502847 109503151 -36086137 + AluSx SINE Alu 1 304 -8 321 68 0 0 chr10 109503468 109503512 -36085776 + (CA)n Simple_repeat Simple_repeat 1 44 0 30 27 0 0 chr10 109503965 109504002 -36085286 + GC_rich Low_complexity Low_complexity 1 37 0 1826 138 24 0 chr10 109504349 109504640 -36084648 - AluJb SINE Alu -13 299 2 2025 89 25 0 chr10 109505689 109505971 -36083317 - AluSp SINE Alu -24 289 1 2606 125 71 2 chr10 109505983 109506390 -36082898 + LTR35 LTR ERV1 184 618 0 305 259 104 7 chr10 109506390 109506525 -36082763 - L1ME LINE L1 -480 5641 5494 1832 150 14 7 chr10 109507417 109507711 -36081577 - AluSx SINE Alu -16 296 1 181 0 33 33 chr10 109507922 109507952 -36081336 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 1930 101 0 0 chr10 109508111 109508369 -36080919 - AluSx SINE Alu -47 265 8 314 23 0 0 chr10 109509251 109509295 -36079993 + L1PA3 LINE L1 6112 6155 0 342 0 0 0 chr10 109509815 109509853 -36079435 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 1695 119 3 71 chr10 109509855 109510165 -36079123 - AluSx SINE Alu -11 301 13 366 280 95 26 chr10 109510166 109510355 -36078933 - L1ME LINE L1 -2058 4088 3887 1949 103 64 0 chr10 109510514 109510795 -36078493 - AluSx SINE Alu -13 299 1 1488 133 16 19 chr10 109511795 109512051 -36077237 + AluJb SINE Alu 42 296 -16 306 330 11 0 chr10 109512521 109512615 -36076673 - MIR SINE MIR -65 143 49 660 241 23 29 chr10 109512852 109513026 -36076262 + LTR16A1 LTR ERVL 284 456 -1 318 297 62 110 chr10 109513193 109513547 -36075741 + L2 LINE L2 2848 3184 -88 483 202 58 0 chr10 109513744 109513848 -36075440 - L1MA6 LINE L1 -100 6200 6091 2510 146 43 18 chr10 109513904 109513918 -36075370 - L1MC1 LINE L1 0 6333 6321 2065 116 0 0 chr10 109513918 109514226 -36075062 - AluSx SINE Alu 0 308 1 2510 146 43 18 chr10 109514226 109514655 -36074633 - L1MC1 LINE L1 -12 6321 5878 315 319 43 0 chr10 109514813 109514907 -36074381 - MIR SINE MIR -164 98 1 947 214 52 22 chr10 109515158 109515387 -36073901 - MER106A DNA MER1_type 0 236 1 652 258 115 32 chr10 109515895 109516112 -36073176 - MIR SINE MIR -26 236 2 572 316 47 27 chr10 109516274 109516610 -36072678 + L2 LINE L2 2717 3054 -218 312 338 0 0 chr10 109516630 109516710 -36072578 + L3 LINE CR1 1018 1097 -480 471 324 141 14 chr10 109516758 109516971 -36072317 - MIR SINE MIR -22 240 1 315 263 105 91 chr10 109517234 109517443 -36071845 + L3 LINE CR1 1361 1572 -5 2021 78 20 34 chr10 109518686 109518979 -36070309 - AluSx SINE Alu -18 294 6 216 272 10 48 chr10 109520470 109520573 -36068715 + G-rich Low_complexity Low_complexity 5 103 0 1669 139 3 65 chr10 109521631 109521954 -36067334 + AluJb SINE Alu 1 303 -9 4276 169 30 8 chr10 109521954 109522749 -36066539 + L1MA6 LINE L1 5488 6300 0 1859 95 77 0 chr10 109522775 109523060 -36066228 + AluSg1 SINE Alu 1 307 -2 1633 160 57 16 chr10 109524710 109524771 -36064517 - L1 LINE L1 -1534 4612 4555 1797 71 4 30 chr10 109524771 109525039 -36064249 - AluY SINE Alu -1 310 50 1633 160 57 16 chr10 109525039 109525345 -36063943 - L1 LINE L1 -1591 4555 4230 1581 151 3 48 chr10 109525588 109525899 -36063389 - AluJo SINE Alu -15 297 1 456 268 74 59 chr10 109526031 109526341 -36062947 + L1MC4 LINE L1 7545 7864 -178 1851 66 111 7 chr10 109526341 109526612 -36062676 - AluSc SINE Alu -10 299 1 456 268 74 59 chr10 109526612 109526722 -36062566 + L1MC4 LINE L1 7864 7971 -71 1624 101 159 8 chr10 109526741 109526999 -36062289 - AluSq SINE Alu -5 298 2 364 306 132 51 chr10 109527042 109527277 -36062011 - MIR SINE MIR 0 262 9 254 274 36 12 chr10 109527996 109528080 -36061208 + MIR SINE MIR 121 206 -56 299 320 78 50 chr10 109528475 109528859 -36060429 + L1MC4 LINE L1 5347 5741 -380 1581 153 6 77 chr10 109528920 109529034 -36060254 + AluJo SINE Alu 1 121 -191 2108 96 0 7 chr10 109529034 109529343 -36059945 + AluSg SINE Alu 4 310 0 1581 153 6 77 chr10 109529343 109529554 -36059734 + AluJo SINE Alu 121 304 -8 1836 128 32 3 chr10 109529597 109529879 -36059409 + AluSx SINE Alu 1 290 -22 479 245 60 66 chr10 109530032 109530195 -36059093 + L1MC4 LINE L1 5751 5857 -264 2006 124 3 0 chr10 109530195 109530486 -36058802 + AluSg SINE Alu 2 293 -17 479 245 60 66 chr10 109530486 109530594 -36058694 + L1MC4 LINE L1 5857 5964 -157 304 298 105 0 chr10 109530492 109530606 -36058682 - L1MC3 LINE L1 -1139 6646 6521 * 367 242 8 77 chr10 109530617 109530646 -36058642 + L1ME2 LINE L1 6004 6033 -130 1712 133 0 53 chr10 109530646 109530946 -36058342 + AluSx SINE Alu 11 294 -18 367 242 8 77 chr10 109530946 109531038 -36058250 + L1ME2 LINE L1 6033 6102 -61 2024 199 61 25 chr10 109531056 109531499 -36057789 + LTR2B LTR ERV1 32 490 0 2289 99 0 0 chr10 109531522 109531834 -36057454 - AluSx SINE Alu 0 312 1 266 277 170 9 chr10 109531837 109531949 -36057339 + MIR SINE MIR 116 245 -17 402 296 158 53 chr10 109532096 109532139 -36057149 + L3 LINE CR1 1180 1217 -360 1664 181 7 7 chr10 109532139 109532432 -36056856 + AluJo SINE Alu 3 295 -17 402 296 158 53 chr10 109532432 109532743 -36056545 + L3 LINE CR1 1217 1571 -6 2077 93 7 0 chr10 109533004 109533309 -36055979 - AluSc SINE Alu 0 307 1 276 309 0 32 chr10 109533369 109533463 -36055825 + MIR SINE MIR 16 106 -102 2278 222 78 23 chr10 109533466 109533714 -36055574 + Charlie1a DNA MER1_type 1 234 -2527 1823 89 53 0 chr10 109533714 109533961 -36055327 - AluSq SINE Alu -53 260 1 2278 222 78 23 chr10 109533961 109534311 -36054977 + Charlie1a DNA MER1_type 234 632 -823 1408 148 133 7 chr10 109534313 109534583 -36054705 + AluJb SINE Alu 9 312 0 1705 169 9 34 chr10 109534587 109534841 -36054447 + Charlie1a DNA MER1_type 627 871 -1890 1671 179 0 19 chr10 109534841 109535154 -36054134 + AluJo SINE Alu 1 307 -5 1705 169 9 34 chr10 109535154 109535249 -36054039 + Charlie1a DNA MER1_type 871 967 -488 1281 179 192 26 chr10 109535250 109535636 -36053652 + LTR7 LTR ERV1 1 450 0 1921 198 49 27 chr10 109535636 109536085 -36053203 + HERVH LTR ERV1 1 459 -7254 3711 139 12 31 chr10 109536154 109536802 -36052486 + HERVH LTR ERV1 793 1428 -6285 9193 123 7 32 chr10 109537884 109539336 -36049952 + HERVH LTR ERV1 1416 2830 -4883 6531 124 6 11 chr10 109539336 109539738 -36049550 + HERVH LTR ERV1 3357 3759 -3954 2044 111 3 3 chr10 109539738 109540026 -36049262 - AluSx SINE Alu -24 288 1 6531 124 6 11 chr10 109540026 109541252 -36048036 + HERVH LTR ERV1 3759 4910 -2803 1382 150 29 44 chr10 109541252 109541472 -36047816 + HERVH LTR ERV1 5747 5964 -1749 2279 85 0 0 chr10 109541472 109541766 -36047522 - AluY SINE Alu -17 294 1 1382 150 29 44 chr10 109541766 109541819 -36047469 + HERVH LTR ERV1 5964 6016 -1697 * 3726 107 7 16 chr10 109541812 109542373 -36046915 + HERVH LTR ERV1 7157 7712 -1 823 116 70 8 chr10 109542374 109542503 -36046785 + LTR7 LTR ERV1 1 137 -313 886 137 0 26 chr10 109542576 109542729 -36046559 + LTR7 LTR ERV1 302 450 0 * 1377 107 136 48 chr10 109542729 109542800 -36046488 + Charlie1a DNA MER1_type 964 1027 -1734 1811 159 3 0 chr10 109542800 109543090 -36046198 + AluJb SINE Alu 9 299 -13 1377 107 136 48 chr10 109543090 109543323 -36045965 + Charlie1a DNA MER1_type 1027 1295 -160 1705 165 10 13 chr10 109543324 109543627 -36045661 - AluJb SINE Alu -5 307 6 949 188 28 0 chr10 109543631 109543844 -36045444 - L1M4 LINE L1 -958 5188 4970 273 159 48 16 chr10 109543844 109543907 -36045381 + Charlie1a DNA MER1_type 1391 1455 0 296 277 36 78 chr10 109543909 109543954 -36045334 + MIR SINE MIR 104 149 -113 2063 136 0 0 chr10 109543954 109544262 -36045026 + AluSx SINE Alu 1 308 -4 296 277 36 78 chr10 109544262 109544382 -36044906 + MIR SINE MIR 149 262 0 217 239 90 0 chr10 109544430 109544497 -36044791 + L2 LINE L2 3188 3260 -12 234 0 0 0 chr10 109544618 109544644 -36044644 + (TAAAAA)n Simple_repeat Simple_repeat 5 30 0 903 272 70 48 chr10 109544651 109544781 -36044507 - L3 LINE CR1 -638 939 813 2042 106 0 0 chr10 109544781 109545063 -36044225 + AluY SINE Alu 1 282 -29 350 21 21 0 chr10 109545063 109545110 -36044178 + (TA)n Simple_repeat Simple_repeat 2 49 0 903 272 70 48 chr10 109545110 109545294 -36043994 - L3 LINE CR1 -763 814 617 2051 195 59 129 chr10 109546094 109546534 -36042754 - HAL1 LINE L1 0 2507 2156 1839 113 13 48 chr10 109546534 109546845 -36042443 + AluSg1 SINE Alu 1 300 -9 2051 195 59 129 chr10 109546845 109547272 -36042016 - HAL1 LINE L1 -351 2156 1701 1752 146 17 17 chr10 109547273 109547575 -36041713 - AluSx SINE Alu -10 302 1 1307 228 111 169 chr10 109547615 109547930 -36041358 - HAL1 LINE L1 -1063 1444 1112 2388 70 3 6 chr10 109547930 109548243 -36041045 - AluSq SINE Alu -1 312 1 1307 228 111 169 chr10 109548243 109548357 -36040931 - HAL1 LINE L1 -1395 1112 993 189 0 0 0 chr10 109548357 109548378 -36040910 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 665 180 0 47 chr10 109548378 109548500 -36040788 - FLAM_C SINE Alu -26 117 2 1307 228 111 169 chr10 109548500 109548791 -36040497 - HAL1 LINE L1 -1513 994 688 1713 147 3 46 chr10 109548791 109548977 -36040311 - AluSx SINE Alu 0 312 120 207 0 0 0 chr10 109548977 109549000 -36040288 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2121 80 14 0 chr10 109549000 109549276 -36040012 - AluSc SINE Alu -29 280 1 1713 147 3 46 chr10 109549276 109549414 -36039874 - AluSx SINE Alu -190 122 1 1307 228 111 169 chr10 109549414 109549592 -36039696 - HAL1 LINE L1 -1819 688 501 264 130 93 0 chr10 109549592 109549646 -36039642 + LTR41 LTR ERVL 717 794 -1 1307 228 111 169 chr10 109549646 109550098 -36039190 - HAL1 LINE L1 -2006 501 4 341 282 41 47 chr10 109550115 109550285 -36039003 - L2 LINE L2 -4 3309 3141 1801 135 10 30 chr10 109550295 109550591 -36038697 - AluSx SINE Alu -22 290 1 2126 116 3 0 chr10 109550630 109550931 -36038357 - AluSx SINE Alu -9 303 2 714 167 9 0 chr10 109551062 109551176 -36038112 - FLAM_C SINE Alu -18 115 1 1901 123 35 3 chr10 109551194 109551478 -36037810 - AluSx SINE Alu -19 293 1 589 188 8 17 chr10 109551537 109551678 -36037610 - FLAM_A SINE Alu 0 140 1 745 160 0 8 chr10 109551876 109551995 -36037293 - AluJb SINE Alu -192 120 3 713 169 13 7 chr10 109551998 109552152 -36037136 + CT-rich Low_complexity Low_complexity 2 180 0 1853 145 47 10 chr10 109552152 109552449 -36036839 - AluJb SINE Alu 0 466 5 21 0 0 0 chr10 109552648 109552669 -36036619 + AT_rich Low_complexity Low_complexity 1 21 0 2304 103 0 7 chr10 109552675 109552976 -36036312 + AluSp SINE Alu 2 300 -13 317 308 29 0 chr10 109553091 109553195 -36036093 + CT-rich Low_complexity Low_complexity 3 109 0 1445 223 153 7 chr10 109553403 109553816 -36035472 + L1MC4 LINE L1 7244 7716 -326 291 192 96 0 chr10 109553823 109553896 -36035392 + L1MC4 LINE L1 7773 7852 -190 2066 119 0 14 chr10 109554099 109554384 -36034904 + AluSx SINE Alu 1 281 -31 213 39 0 0 chr10 109554384 109554410 -36034878 + (CA)n Simple_repeat Simple_repeat 1 26 0 1641 258 46 35 chr10 109554415 109554872 -36034416 + MER115 DNA AcHobo 171 632 -61 2159 115 3 3 chr10 109555014 109555318 -36033970 - AluSx SINE Alu -8 304 1 2296 103 0 3 chr10 109555619 109555921 -36033367 - AluSx SINE Alu -10 302 2 242 273 0 0 chr10 109556001 109556056 -36033232 + CT-rich Low_complexity Low_complexity 3 57 0 2212 102 3 7 chr10 109556208 109556503 -36032785 + AluSc SINE Alu 1 294 -15 751 186 0 0 chr10 109556504 109556633 -36032655 - AluJo/FLAM SINE Alu -173 129 1 1486 100 39 39 chr10 109556654 109556913 -36032375 - AluSx SINE Alu 0 312 63 2138 108 14 0 chr10 109557563 109557849 -36031439 + AluSx SINE Alu 1 290 -22 198 0 0 0 chr10 109558012 109558034 -36031254 + (TTA)n Simple_repeat Simple_repeat 3 24 0 44702 43 1 4 chr10 109558034 109564188 -36025100 - L1PA4 LINE L1 -18 6137 1 2410 99 0 0 chr10 109564188 109564492 -36024796 - AluSq SINE Alu -9 304 1 2217 124 0 0 chr10 109565078 109565377 -36023911 + AluSx SINE Alu 1 299 -13 2212 128 0 7 chr10 109565755 109566059 -36023229 + AluSx SINE Alu 1 302 -10 1332 156 53 86 chr10 109566425 109566727 -36022561 + AluJo SINE Alu 1 292 -20 225 139 0 0 chr10 109566997 109567040 -36022248 + (TG)n Simple_repeat Simple_repeat 2 44 0 2054 121 0 4 chr10 109567040 109567321 -36021967 - AluSx SINE Alu -32 280 1 2142 124 7 0 chr10 109567610 109567908 -36021380 - AluSx SINE Alu -12 300 1 207 0 0 0 chr10 109567919 109567942 -36021346 + (TTTAA)n Simple_repeat Simple_repeat 3 25 0 1802 173 0 3 chr10 109567945 109568228 -36021060 - AluJo SINE Alu -30 282 1 281 320 90 8 chr10 109568624 109568746 -36020542 + L2 LINE L2 3168 3299 -14 672 260 101 18 chr10 109568865 109569166 -36020122 + L1M3 LINE L1 5483 5802 -378 2174 86 0 0 chr10 109569208 109569477 -36019811 - AluSx SINE Alu -7 305 37 879 109 8 16 chr10 109569714 109569842 -36019446 - FLAM_C SINE Alu -16 127 1 180 256 0 0 chr10 109569976 109570015 -36019273 - L2 LINE L2 -96 3176 3138 2194 111 3 25 chr10 109570140 109570456 -36018832 + AluSq SINE Alu 1 309 -4 201 39 0 0 chr10 109570713 109570739 -36018549 + (GA)n Simple_repeat Simple_repeat 1 26 0 350 326 6 55 chr10 109571545 109571726 -36017562 - MER5A DNA MER1_type 0 189 7 2360 93 3 7 chr10 109571786 109572096 -36017192 - AluSx SINE Alu -3 309 1 762 183 0 0 chr10 109572246 109572366 -36016922 + FLAM_C SINE Alu 2 121 -12 27 0 0 0 chr10 109572366 109572393 -36016895 + AT_rich Low_complexity Low_complexity 1 27 0 2028 112 3 7 chr10 109572395 109572727 -36016561 - AluSp SINE Alu 0 331 1 2420 97 3 0 chr10 109572983 109573291 -36015997 - AluSx SINE Alu -3 309 1 2251 104 26 10 chr10 109574409 109574717 -36014571 + AluSq SINE Alu 1 313 0 1667 169 3 52 chr10 109574743 109574892 -36014396 + AluJo SINE Alu 1 127 -185 375 23 0 0 chr10 109574892 109574936 -36014352 + (TA)n Simple_repeat Simple_repeat 2 45 0 1667 169 3 52 chr10 109574936 109575111 -36014177 + AluJo SINE Alu 127 309 -3 1646 106 5 0 chr10 109575293 109575510 -36013778 - AluSx SINE Alu -94 218 1 2137 130 7 0 chr10 109575513 109575806 -36013482 - AluSx SINE Alu -17 295 1 483 154 0 0 chr10 109575990 109576068 -36013220 - MER69 DNA AcHobo -2 2524 2447 377 213 98 16 chr10 109576411 109576533 -36012755 + L2 LINE L2 3180 3311 -2 700 125 52 73 chr10 109576646 109576782 -36012506 - FLAM_C SINE Alu 0 133 1 2148 117 0 0 chr10 109576801 109577074 -36012214 - AluSx SINE Alu -39 273 1 313 260 30 10 chr10 109577142 109577242 -36012046 + L1ME LINE L1 5121 5222 -924 570 186 0 16 chr10 109577345 109577474 -36011814 + L1ME LINE L1 5238 5364 -782 306 108 0 32 chr10 109577485 109577548 -36011740 + Alu SINE Alu 3 48 -253 1514 72 0 38 chr10 109577605 109577814 -36011474 + AluY SINE Alu 100 300 -11 753 189 118 174 chr10 109577814 109577969 -36011319 + L1ME LINE L1 5356 5518 -648 357 169 15 0 chr10 109577969 109578034 -36011254 - FLAM SINE Alu 0 133 68 1919 147 13 10 chr10 109578039 109578346 -36010942 + AluSx SINE Alu 5 312 0 753 189 118 174 chr10 109578346 109578500 -36010788 + L1ME LINE L1 5522 5714 -452 23 0 0 0 chr10 109578504 109578527 -36010761 + AT_rich Low_complexity Low_complexity 1 23 0 1862 131 8 0 chr10 109578543 109578828 -36010460 + AluSx SINE Alu 23 309 0 208 188 0 21 chr10 109578846 109578894 -36010394 + L2 LINE L2 2598 2644 -670 678 165 0 8 chr10 109578894 109579015 -36010273 - AluSg/x SINE Alu -16 294 175 2124 136 3 0 chr10 109579117 109579427 -36009861 - L1PA16 LINE L1 -33 6133 5823 2370 111 0 0 chr10 109579427 109579734 -36009554 - AluSx SINE Alu -5 307 1 2083 120 3 10 chr10 109580417 109580717 -36008571 - AluSq SINE Alu -15 298 1 1907 127 67 0 chr10 109580960 109581243 -36008045 - AluSq SINE Alu -9 304 3 2347 116 3 36 chr10 109581522 109581546 -36007742 + L1PA16 LINE L1 5807 5830 -336 1888 166 0 13 chr10 109581546 109581848 -36007440 + AluJo SINE Alu 1 298 -14 2154 134 0 3 chr10 109581851 109582156 -36007132 + AluSx SINE Alu 1 304 -8 2347 116 3 36 chr10 109582156 109582490 -36006798 + L1PA16 LINE L1 5832 6157 -9 1537 184 0 70 chr10 109582491 109582888 -36006400 + L1 LINE L1 4282 4650 -1496 1186 86 0 63 chr10 109582889 109583063 -36006225 + AluSg/x SINE Alu 141 303 -7 833 179 51 0 chr10 109583066 109583250 -36006038 + FRAM SINE Alu 1 56 0 1484 159 104 11 chr10 109583347 109583617 -36005671 - AluJb SINE Alu -17 295 1 2036 136 3 10 chr10 109583627 109583935 -36005353 - AluSx SINE Alu -6 306 1 1329 102 0 6 chr10 109583946 109584123 -36005165 - AluSq SINE Alu -13 300 125 192 77 0 0 chr10 109584130 109584156 -36005132 + (TTTC)n Simple_repeat Simple_repeat 2 27 0 2287 53 67 30 chr10 109584163 109584462 -36004826 - AluY SINE Alu -1 310 1 203 300 75 33 chr10 109584462 109584582 -36004706 - L2 LINE L2 -10 3262 3138 696 269 196 14 chr10 109584647 109585085 -36004203 + L2 LINE L2 2454 2971 -343 298 259 106 0 chr10 109585242 109585327 -36003961 + L2 LINE L2 3202 3295 -18 1657 167 21 18 chr10 109585327 109585636 -36003652 - AluJo SINE Alu 0 310 1 594 107 45 0 chr10 109585644 109585756 -36003532 + CT-rich Low_complexity Low_complexity 2 118 0 5060 157 68 23 chr10 109585877 109587482 -36001806 + L1PA16 LINE L1 4413 6165 -1 24 0 0 0 chr10 109587485 109587509 -36001779 + AT_rich Low_complexity Low_complexity 1 24 0 1826 177 3 6 chr10 109587509 109587820 -36001468 + AluJo SINE Alu 2 311 -1 619 136 0 0 chr10 109587968 109588056 -36001232 - FLAM SINE Alu -17 126 39 33 0 0 0 chr10 109588061 109588094 -36001194 + AT_rich Low_complexity Low_complexity 1 33 0 2259 112 0 34 chr10 109588219 109588542 -36000746 - AluSx SINE Alu 0 312 1 2394 80 10 0 chr10 109588783 109589082 -36000206 - AluSg SINE Alu -8 302 1 600 221 8 0 chr10 109589466 109589593 -35999695 - L2 LINE L2 0 3313 3186 1728 183 0 3 chr10 109590507 109590817 -35998471 + AluJo SINE Alu 1 309 0 1579 127 13 0 chr10 109591119 109591392 -35997896 - AluSg SINE Alu 0 328 53 1458 132 5 5 chr10 109591392 109591604 -35997684 - AluSq SINE Alu -71 242 30 658 150 0 0 chr10 109591824 109591937 -35997351 - AluSq/x SINE Alu -199 114 2 792 307 68 23 chr10 109591937 109592098 -35997190 + L2 LINE L2 2637 2789 -524 2046 106 14 18 chr10 109592098 109592231 -35997057 + AluSx SINE Alu 1 133 -177 2279 92 7 13 chr10 109592231 109592534 -35996754 + AluSg SINE Alu 1 301 -9 2046 106 14 18 chr10 109592534 109592711 -35996577 + AluSx SINE Alu 133 310 0 792 307 68 23 chr10 109592711 109593185 -35996103 + L2 LINE L2 2789 3313 0 281 299 43 68 chr10 109593185 109593392 -35995896 - L3b LINE CR1 -77 1506 1305 1176 132 0 0 chr10 109593653 109593820 -35995468 + AluSg/x SINE Alu 135 301 -9 2181 123 3 0 chr10 109594083 109594376 -35994912 - AluSx SINE Alu -18 294 1 1829 138 7 36 chr10 109594425 109594729 -35994559 + AluJb SINE Alu 1 295 -17 643 278 39 5 chr10 109594838 109595043 -35994245 + MIR SINE MIR 1 212 -50 1563 90 0 5 chr10 109595098 109595299 -35993989 - AluSp SINE Alu -7 306 107 1124 303 67 9 chr10 109595299 109595866 -35993422 + L1M4 LINE L1 3348 3947 -2199 32 0 0 0 chr10 109595866 109595898 -35993390 + AT_rich Low_complexity Low_complexity 1 32 0 2347 92 0 10 chr10 109595898 109596203 -35993085 - AluSc SINE Alu -7 302 1 553 192 20 0 chr10 109596203 109596302 -35992986 - AluJo SINE Alu -177 135 35 391 261 98 50 chr10 109596303 109596384 -35992904 + L1M4 LINE L1 3942 4018 -2128 2445 203 62 15 chr10 109596384 109596902 -35992386 - MLT1F LTR MaLR 0 542 1 391 261 98 50 chr10 109596902 109597166 -35992122 + L1M4 LINE L1 4018 4321 -1825 895 157 7 0 chr10 109597215 109597362 -35991926 - L1PB4 LINE L1 -151 6005 5858 341 278 80 7 chr10 109597363 109597514 -35991774 + L1M4 LINE L1 4027 4188 -1958 1704 183 7 0 chr10 109598200 109598484 -35990804 - AluJb SINE Alu -26 286 1 1043 147 18 52 chr10 109598529 109598717 -35990571 + MLT1C LTR MaLR 1 180 -210 2061 130 10 0 chr10 109598717 109599016 -35990272 + AluJo SINE Alu 1 302 -10 1043 147 18 52 chr10 109599016 109599064 -35990224 + MLT1C LTR MaLR 180 228 -162 1302 199 165 67 chr10 109599070 109599367 -35989921 + MLT1C LTR MaLR 180 467 0 2162 116 0 34 chr10 109599523 109599843 -35989445 - AluSx SINE Alu -3 309 1 748 275 69 36 chr10 109600400 109600715 -35988573 - L1ME LINE L1 -395 5726 5390 2078 125 0 7 chr10 109600715 109601012 -35988276 - AluSx SINE Alu -17 295 1 748 275 69 36 chr10 109601012 109601143 -35988145 - L1ME LINE L1 -731 5390 5265 1768 112 126 0 chr10 109601156 109601425 -35987863 - AluSg SINE Alu -7 303 1 255 335 84 58 chr10 109601702 109601984 -35987304 + L2 LINE L2 2563 2836 -436 2459 79 0 7 chr10 109601984 109602289 -35986999 - AluSx SINE Alu -9 303 1 255 335 84 58 chr10 109602289 109602696 -35986592 + L2 LINE L2 2836 3268 -4 2216 114 10 0 chr10 109602956 109603262 -35986026 + AluSq SINE Alu 1 309 -4 590 115 0 0 chr10 109603313 109603391 -35985897 + AluSg/x SINE Alu 208 285 -27 181 0 0 0 chr10 109603391 109603411 -35985877 + (TAAAA)n Simple_repeat Simple_repeat 2 130 0 2325 95 20 3 chr10 109603420 109603726 -35985562 + AluSx SINE Alu 1 311 -1 21 71 0 0 chr10 109603749 109603791 -35985497 + AT_rich Low_complexity Low_complexity 1 42 0 2135 92 7 0 chr10 109604254 109604538 -35984750 - AluSg SINE Alu -24 286 1 41522 63 16 5 chr10 109604574 109610654 -35978634 + L1PA5 LINE L1 5 6149 -5 25 0 0 0 chr10 109610654 109610679 -35978609 + AT_rich Low_complexity Low_complexity 1 25 0 738 160 0 8 chr10 109610931 109611052 -35978236 + FLAM_C SINE Alu 1 122 -180 681 101 0 0 chr10 109611052 109611151 -35978137 + (TAGA)n Simple_repeat Simple_repeat 4 102 0 1555 86 31 39 chr10 109611777 109612034 -35977254 + L1MA2 LINE L1 6048 6302 -2 228 392 31 0 chr10 109612370 109612500 -35976788 + L2 LINE L2 3175 3308 -5 311 44 22 0 chr10 109612762 109612807 -35976481 + (TG)n Simple_repeat Simple_repeat 1 46 0 24 0 0 0 chr10 109616569 109616593 -35972695 + AT_rich Low_complexity Low_complexity 1 24 0 256 204 102 34 chr10 109617868 109617956 -35971332 - L1MC5 LINE L1 -63 7898 7805 1054 167 39 0 chr10 109620231 109620411 -35968877 - AluJb SINE Alu -23 289 103 813 168 0 0 chr10 109620488 109620619 -35968669 - FLAM_C SINE Alu -12 131 1 2115 105 0 3 chr10 109620808 109621131 -35968157 - AluSx SINE Alu 0 312 1 1630 127 25 0 chr10 109621131 109621368 -35967920 + Tigger3(Golem) DNA MER2_type 2790 3032 0 713 264 75 14 chr10 109621733 109621945 -35967343 + MIR SINE MIR 2 226 -36 304 128 0 0 chr10 109621946 109621993 -35967295 + FLAM SINE Alu 86 132 -1 1337 116 5 0 chr10 109622002 109622192 -35967096 + AluSx SINE Alu 2 192 -120 2271 62 41 0 chr10 109622195 109622486 -35966802 - AluY SINE Alu -8 303 1 442 223 78 0 chr10 109622584 109622687 -35966601 + MIR SINE MIR 152 262 0 225 333 11 33 chr10 109623133 109623223 -35966065 - L2 LINE L2 0 3272 3185 1897 174 29 10 chr10 109623346 109623732 -35965556 - L1MB7 LINE L1 -1 6183 5791 1917 155 3 0 chr10 109623733 109624030 -35965258 + AluSx SINE Alu 1 298 -14 903 206 28 42 chr10 109624030 109624244 -35965044 - L2 LINE L2 -852 2462 2252 2256 89 0 0 chr10 109624658 109624951 -35964337 - AluSg SINE Alu -17 293 1 2189 98 3 7 chr10 109625047 109625352 -35963936 + AluSx SINE Alu 1 304 -8 470 163 0 25 chr10 109625359 109625476 -35963812 + AluY SINE Alu 204 318 0 2041 72 16 59 chr10 109626098 109626402 -35962886 + AluY SINE Alu 1 291 -20 2969 191 95 46 chr10 109626832 109627365 -35961923 - L1MD2 LINE L1 -6 6353 5848 209 33 33 0 chr10 109627365 109627395 -35961893 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2232 86 3 0 chr10 109627397 109627687 -35961601 - AluY SINE Alu -20 291 1 2969 191 95 46 chr10 109627687 109627856 -35961432 - L1MD2 LINE L1 -511 5848 5605 1839 146 0 22 chr10 109627856 109628172 -35961116 - AluSx SINE Alu -3 309 1 2969 191 95 46 chr10 109628172 109628230 -35961058 - L1MD2 LINE L1 -754 5605 5551 513 295 85 30 chr10 109628320 109628520 -35960768 + MIR SINE MIR 35 245 -17 2133 110 0 3 chr10 109628670 109628971 -35960317 - AluSx SINE Alu -12 300 1 251 337 11 15 chr10 109629269 109629378 -35959910 - MIR SINE MIR -69 139 47 214 260 21 62 chr10 109629478 109629574 -35959714 + MIR3 SINE MIR 115 206 -2 550 231 73 29 chr10 109629653 109629852 -35959436 + MIR SINE MIR 6 213 -49 688 154 46 8 chr10 109630815 109630945 -35958343 + AluJo SINE Alu 2 136 -176 22 0 0 0 chr10 109631418 109631440 -35957848 + AT_rich Low_complexity Low_complexity 1 22 0 267 311 81 20 chr10 109635285 109635433 -35953855 - MIR3 SINE MIR -29 179 23 349 250 199 32 chr10 109638249 109638266 -35951022 - MIR3 SINE MIR -7 201 188 2404 66 0 0 chr10 109638266 109638568 -35950720 + AluY SINE Alu 1 302 -9 349 250 199 32 chr10 109638568 109638706 -35950582 - MIR3 SINE MIR -20 188 20 4084 226 65 46 chr10 109641007 109641805 -35947483 + L1MD2 LINE L1 3132 3913 -2233 1263 156 138 70 chr10 109641805 109642176 -35947112 + MSTD LTR MaLR 1 396 0 4084 226 65 46 chr10 109642176 109642314 -35946974 + L1MD2 LINE L1 3913 4047 -2099 2088 105 10 0 chr10 109642314 109642610 -35946678 - AluSq SINE Alu -14 299 1 4084 226 65 46 chr10 109642610 109643073 -35946215 + L1MD2 LINE L1 4047 4559 -1587 2311 216 55 49 chr10 109643077 109643180 -35946108 + L1MD2 LINE L1 5682 5783 -576 2381 61 0 0 chr10 109643180 109643475 -35945813 + AluY SINE Alu 1 295 -16 2311 216 55 49 chr10 109643475 109644030 -35945258 + L1MD2 LINE L1 5783 6344 -15 188 212 12 35 chr10 109644034 109644119 -35945169 + GA-rich Low_complexity Low_complexity 2 84 0 303 311 127 78 chr10 109644244 109644914 -35944374 + L2 LINE L2 2399 3125 -147 2156 100 0 7 chr10 109644914 109645214 -35944074 - AluSc SINE Alu -11 298 1 303 311 127 78 chr10 109645214 109645315 -35943973 + L2 LINE L2 3125 3220 -52 328 266 110 18 chr10 109645349 109645458 -35943830 + L2 LINE L2 3194 3312 -1 1177 81 132 0 chr10 109645724 109645754 -35943534 - MER107 DNA MER1_type 0 197 172 206 61 0 30 chr10 109645754 109645787 -35943501 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 1177 81 132 0 chr10 109645787 109645930 -35943358 - MER107 DNA MER1_type -25 172 1 681 326 94 20 chr10 109645964 109646314 -35942974 + L2 LINE L2 2896 3271 -1 2097 109 0 3 chr10 109650401 109650704 -35938584 - AluSx SINE Alu -10 302 1 1690 123 0 114 chr10 109651013 109651355 -35937933 + AluJb SINE Alu 1 303 -9 218 246 27 17 chr10 109651961 109652029 -35937259 + CT-rich Low_complexity Low_complexity 1 68 0 835 158 67 12 chr10 109653359 109653523 -35935765 + MER5B DNA MER1_type 1 173 -5 2278 66 3 10 chr10 109653523 109653824 -35935464 - AluSp SINE Alu -14 299 1 426 80 9 143 chr10 109653833 109653945 -35935343 - L1PA13 LINE L1 0 6163 6067 547 309 23 16 chr10 109654134 109654326 -35934962 - MIR SINE MIR -50 212 16 482 283 145 13 chr10 109654485 109654644 -35934644 + MER5A DNA MER1_type 10 189 0 218 315 74 19 chr10 109654644 109654751 -35934537 - L2 LINE L2 -59 3254 3142 339 44 0 0 chr10 109655383 109655428 -35933860 + (CA)n Simple_repeat Simple_repeat 1 45 0 328 294 210 37 chr10 109656530 109656744 -35932544 - MIR SINE MIR -6 256 6 816 199 6 6 chr10 109656907 109657063 -35932225 + FRAM SINE Alu 1 156 -10 201 143 0 29 chr10 109658435 109658470 -35930818 + (GGGA)n Simple_repeat Simple_repeat 3 36 0 181 300 75 25 chr10 109659548 109659628 -35929660 + MER5B DNA MER1_type 41 124 -54 655 231 31 115 chr10 109659964 109660250 -35929038 - MIR SINE MIR 0 262 1 679 188 0 51 chr10 109661577 109661715 -35927573 + FLAM_A SINE Alu 1 131 -2 329 219 154 41 chr10 109661986 109662109 -35927179 - MIR SINE MIR -105 157 21 305 242 63 32 chr10 109662920 109663015 -35926273 - MIR3 SINE MIR -38 170 73 2095 117 0 10 chr10 109663550 109663858 -35925430 - AluSx SINE Alu -7 305 1 389 209 0 159 chr10 109663882 109663991 -35925297 - L2 LINE L2 0 3313 3237 2158 115 0 0 chr10 109663991 109664296 -35924992 + AluSx SINE Alu 1 305 -7 389 209 0 159 chr10 109664296 109664349 -35924939 - L2 LINE L2 -76 3237 3177 1243 103 0 0 chr10 109664915 109665089 -35924199 + AluSg/x SINE Alu 127 300 -10 1869 137 3 3 chr10 109665103 109665395 -35923893 + AluJb SINE Alu 6 297 -15 527 269 62 7 chr10 109665592 109665737 -35923551 + MIR SINE MIR 103 255 -7 2405 75 0 7 chr10 109666454 109666762 -35922526 + AluY SINE Alu 1 306 -5 1613 276 110 68 chr10 109667333 109667453 -35921835 + L2 LINE L2 2172 2285 -1028 1719 116 0 0 chr10 109667453 109667695 -35921593 - AluSx SINE Alu -15 297 56 1613 276 110 68 chr10 109667695 109668670 -35920618 + L2 LINE L2 2285 3289 -24 213 271 51 0 chr10 109668839 109668898 -35920390 + MIR3 SINE MIR 121 182 -26 348 255 62 16 chr10 109669081 109669247 -35920041 - MIR SINE MIR -32 230 7 2151 95 14 0 chr10 109670549 109670843 -35918445 + AluSx SINE Alu 1 298 -14 2123 109 0 13 chr10 109671291 109671594 -35917694 + AluSx SINE Alu 2 300 -12 1757 169 0 0 chr10 109671602 109671886 -35917402 + AluJb SINE Alu 1 284 -28 276 305 61 0 chr10 109671963 109672045 -35917243 + L2 LINE L2 3184 3270 -2 1365 199 42 0 chr10 109672314 109672600 -35916688 + AluJo SINE Alu 1 298 -14 1740 134 31 3 chr10 109672927 109673219 -35916069 - AluSx SINE Alu -7 305 6 1404 175 28 21 chr10 109673228 109673514 -35915774 - AluJo SINE Alu -22 290 3 309 261 34 11 chr10 109674232 109674320 -35914968 + GA-rich Low_complexity Low_complexity 1 90 0 296 325 57 32 chr10 109674806 109674963 -35914325 + L2 LINE L2 2635 2795 -519 * 379 175 0 50 chr10 109674949 109675029 -35914259 + L2 LINE L2 3194 3269 -3 515 288 31 47 chr10 109675105 109675296 -35913992 + MER5A DNA MER1_type 1 188 -1 1865 161 0 7 chr10 109675342 109675647 -35913641 - AluSx SINE Alu -9 303 1 432 0 0 0 chr10 109675704 109675752 -35913536 + (TG)n Simple_repeat Simple_repeat 2 49 0 432 0 0 0 chr10 109675806 109675854 -35913434 + (TG)n Simple_repeat Simple_repeat 2 49 0 210 300 100 0 chr10 109677189 109677279 -35912009 - MIR3 SINE MIR -23 185 87 2087 128 7 0 chr10 109677409 109677715 -35911573 + AluSq SINE Alu 1 308 -5 1809 137 24 89 chr10 109677805 109677902 -35911386 + Tigger3(Golem) DNA MER2_type 1 103 -2926 2158 115 7 0 chr10 109677902 109678206 -35911082 - AluSq SINE Alu -7 306 1 1809 137 24 89 chr10 109678206 109678480 -35910808 + Tigger3(Golem) DNA MER2_type 103 3029 0 750 154 0 0 chr10 109680814 109680931 -35908357 + FLAM_C SINE Alu 1 117 -26 4761 149 38 27 chr10 109681136 109681178 -35908110 - L1MB7 LINE L1 -16 6168 6128 2066 126 10 0 chr10 109681178 109681487 -35907801 + AluSx SINE Alu 1 312 0 4761 149 38 27 chr10 109681487 109682430 -35906858 - L1MB7 LINE L1 -56 6128 5172 1070 188 210 111 chr10 109682435 109682741 -35906547 - L1MB7 LINE L1 -2190 3956 3682 2277 91 0 3 chr10 109682741 109683049 -35906239 - AluY SINE Alu -2 309 3 1070 188 210 111 chr10 109683049 109683115 -35906173 - L1MB7 LINE L1 -2464 3682 3624 2164 105 3 6 chr10 109683115 109683428 -35905860 - AluSx SINE Alu 0 312 1 1453 156 10 73 chr10 109683428 109683742 -35905546 - AluJb SINE Alu -16 296 3 1070 188 210 111 chr10 109683742 109683996 -35905292 - L1MB7 LINE L1 -2521 3625 3266 1700 181 0 3 chr10 109684009 109684308 -35904980 - AluJb SINE Alu -14 298 1 1278 169 0 0 chr10 109684368 109684581 -35904707 + AluJb SINE Alu 86 298 -14 2313 200 87 71 chr10 109684718 109685353 -35903935 - MLT1E1 LTR MaLR -9 645 1 206 205 0 0 chr10 109686037 109686076 -35903212 + (CGG)n Simple_repeat Simple_repeat 2 40 0 819 154 0 0 chr10 109687134 109687277 -35902011 + FLAM_C SINE Alu 1 143 0 399 207 57 50 chr10 109687320 109687460 -35901828 - Charlie8 DNA MER1_type -2237 180 40 2119 94 42 0 chr10 109688637 109688925 -35900363 + AluSx SINE Alu 1 300 -12 1674 139 0 79 chr10 109688990 109689320 -35899968 - AluJb SINE Alu -8 304 1 771 324 73 9 chr10 109689583 109689923 -35899365 - MLT1I LTR MaLR -47 362 1 939 103 0 0 chr10 109690082 109690234 -35899054 - AluSp/q SINE Alu 0 315 164 26 0 0 0 chr10 109690250 109690276 -35899012 + AT_rich Low_complexity Low_complexity 1 26 0 828 169 0 15 chr10 109690368 109690504 -35898784 + FLAM_C SINE Alu 2 135 -8 429 323 8 8 chr10 109690884 109691008 -35898280 + MIR SINE MIR 18 141 -67 1986 112 3 23 chr10 109691021 109691324 -35897964 + AluSc SINE Alu 1 297 -12 865 211 0 12 chr10 109691333 109691504 -35897784 + FRAM SINE Alu 1 169 -7 1069 142 6 0 chr10 109691577 109691753 -35897535 - AluSg/x SINE Alu 0 312 136 1604 161 7 14 chr10 109691861 109692140 -35897148 - Tigger3(Golem) DNA MER2_type 0 3038 2762 243 62 0 0 chr10 109692227 109692259 -35897029 - Tigger3(Golem) DNA MER2_type -276 2753 2722 507 200 0 0 chr10 109692260 109692340 -35896948 - Tigger3(Golem) DNA MER2_type -2949 80 1 2369 74 0 6 chr10 109692430 109692742 -35896546 - AluY SINE Alu 0 311 2 231 36 0 0 chr10 109692935 109692963 -35896325 + (T)n Simple_repeat Simple_repeat 1 28 0 287 237 93 59 chr10 109692986 109693104 -35896184 + L2 LINE L2 3186 3307 -6 1681 138 0 70 chr10 109693267 109693594 -35895694 - AluJb SINE Alu -1 311 8 2139 80 7 3 chr10 109693671 109693958 -35895330 - AluY SINE Alu -22 289 2 827 159 15 0 chr10 109694384 109694516 -35894772 + AluJb SINE Alu 2 135 -177 2268 92 0 10 chr10 109696821 109697127 -35892161 - AluSx SINE Alu -8 304 2 210 143 0 0 chr10 109699072 109699107 -35890181 + (TG)n Simple_repeat Simple_repeat 2 36 0 444 67 0 0 chr10 109699132 109699192 -35890096 + (TG)n Simple_repeat Simple_repeat 2 61 0 291 250 80 0 chr10 109699650 109699750 -35889538 + MER91C DNA MER1_type 1 108 -32 183 80 0 0 chr10 109699832 109699857 -35889431 + (T)n Simple_repeat Simple_repeat 1 25 0 241 252 193 25 chr10 109700443 109700562 -35888726 - MIR SINE MIR -74 188 50 193 376 80 8 chr10 109700798 109700923 -35888365 + MIR3 SINE MIR 43 176 -32 889 202 60 68 chr10 109703736 109703988 -35885300 + MIR SINE MIR 1 250 -12 195 162 189 0 chr10 109703956 109703993 -35885295 + L2 LINE L2 3216 3259 -13 * 826 103 8 8 chr10 109704443 109704560 -35884728 + FLAM_C SINE Alu 1 117 -16 29 28 0 0 chr10 109704560 109704596 -35884692 + AT_rich Low_complexity Low_complexity 1 36 0 2199 94 0 0 chr10 109704627 109704913 -35884375 + AluSq SINE Alu 16 301 -12 205 217 65 0 chr10 109704982 109705028 -35884260 - MIR SINE MIR -2 260 212 * 240 328 181 28 chr10 109705027 109705204 -35884084 - L2 LINE L2 -92 3180 2977 214 266 292 9 chr10 109705970 109706083 -35883205 + MIR SINE MIR 2 146 -116 507 254 172 14 chr10 109706764 109706973 -35882315 + MIR SINE MIR 20 261 -1 299 318 68 30 chr10 109707292 109707424 -35881864 + MIR3 SINE MIR 5 141 -67 2118 83 17 10 chr10 109707531 109707832 -35881456 - AluSp SINE Alu -10 303 1 239 267 57 38 chr10 109707842 109707947 -35881341 + MIR SINE MIR 150 256 -6 679 195 8 8 chr10 109708408 109708536 -35880752 + FLAM_C SINE Alu 2 129 -4 508 123 0 0 chr10 109709133 109709206 -35880082 - AluJ/FRAM SINE Alu -12 300 228 1673 140 18 7 chr10 109709519 109709804 -35879484 - AluJo SINE Alu -24 288 1 880 233 83 38 chr10 109709997 109710285 -35879003 + MER102a DNA MER1_type 27 327 -3 2465 222 63 24 chr10 109711162 109711778 -35877510 + L3 LINE CR1 450 1089 -488 356 274 44 9 chr10 109712753 109712866 -35876422 - MER5A DNA MER1_type -65 124 8 459 0 0 0 chr10 109713422 109713473 -35875815 + (TG)n Simple_repeat Simple_repeat 2 52 0 217 261 0 0 chr10 109713698 109713744 -35875544 - MIR3 SINE MIR -9 199 154 2108 115 0 0 chr10 109714062 109714349 -35874939 + AluSx SINE Alu 1 287 -25 194 186 47 23 chr10 109715633 109715676 -35873612 + MIR SINE MIR 16 59 -203 568 223 151 6 chr10 109715759 109715925 -35873363 - MIR SINE MIR -20 242 53 779 191 58 40 chr10 109716004 109716177 -35873111 + MIR SINE MIR 66 241 -21 240 35 0 0 chr10 109716205 109716234 -35873054 + (TCC)n Simple_repeat Simple_repeat 2 30 0 231 213 21 0 chr10 109717781 109717828 -35871460 - L3b LINE CR1 -240 1343 1296 438 20 0 0 chr10 109718433 109718484 -35870804 + (CA)n Simple_repeat Simple_repeat 2 52 0 261 0 0 0 chr10 109718483 109718512 -35870776 + (GA)n Simple_repeat Simple_repeat 2 30 0 * 398 196 206 19 chr10 109718617 109718724 -35870564 - MIR3 SINE MIR -52 156 30 477 244 210 74 chr10 109718799 109719189 -35870099 - L2 LINE L2 0 3313 2871 198 180 20 80 chr10 109719519 109719569 -35869719 - L2 LINE L2 -6 3307 3261 279 79 0 0 chr10 109720607 109720645 -35868643 + (TG)n Simple_repeat Simple_repeat 2 39 0 204 170 0 0 chr10 109721352 109721405 -35867883 + (TG)n Simple_repeat Simple_repeat 2 54 0 2330 86 0 0 chr10 109722230 109722533 -35866755 + AluSq SINE Alu 1 303 -10 2071 104 0 0 chr10 109722533 109722811 -35866477 + AluSg SINE Alu 1 278 -32 429 204 65 65 chr10 109723061 109723169 -35866119 + L2 LINE L2 3206 3313 0 203 278 0 14 chr10 109723546 109723690 -35865598 + (CAGA)n Simple_repeat Simple_repeat 2 143 0 1039 289 48 52 chr10 109723744 109723947 -35865341 + MLT1L LTR MaLR 12 214 -401 2126 109 3 0 chr10 109723947 109724240 -35865048 - AluSp SINE Alu -19 294 1 1039 289 48 52 chr10 109724240 109724520 -35864768 + MLT1L LTR MaLR 214 493 -122 268 232 11 11 chr10 109724677 109724772 -35864516 + CT-rich Low_complexity Low_complexity 1 95 0 2044 114 7 0 chr10 109725133 109725422 -35863866 - AluSx SINE Alu -21 291 1 256 242 95 11 chr10 109725577 109725672 -35863616 - L2 LINE L2 -8 3305 3203 206 345 0 0 chr10 109726313 109726368 -35862920 + L2 LINE L2 3005 3059 -213 416 198 151 0 chr10 109726785 109726891 -35862397 - MIR SINE MIR -14 248 127 430 204 97 0 chr10 109726926 109727019 -35862269 + MIR SINE MIR 21 122 -140 533 271 73 0 chr10 109727180 109727331 -35861957 + MIR SINE MIR 101 262 0 286 253 43 129 chr10 109727409 109727530 -35861758 - MIR SINE MIR -44 218 125 1561 137 119 7 chr10 109727530 109727807 -35861481 - AluSg1 SINE Alu -1 308 1 286 253 43 129 chr10 109727807 109727918 -35861370 - MIR SINE MIR -137 125 6 905 256 67 6 chr10 109728416 109728792 -35860496 - LTR16A LTR ERVL -11 439 1 269 250 33 125 chr10 109728823 109728975 -35860313 - L2 LINE L2 -219 3053 2916 766 212 93 26 chr10 109729099 109729292 -35859996 + MIR SINE MIR 57 262 0 249 294 239 0 chr10 109730200 109730309 -35858979 + L2 LINE L2 3138 3272 0 327 304 61 0 chr10 109730641 109730756 -35858532 + MIR SINE MIR 25 146 -116 309 287 77 7 chr10 109730847 109730924 -35858364 - MIR SINE MIR -90 172 86 210 275 107 38 chr10 109730924 109731055 -35858233 + MIR SINE MIR 4 143 -119 672 194 65 0 chr10 109731409 109731533 -35857755 - MER5A DNA MER1_type -1 188 57 3908 196 53 42 chr10 109731536 109732480 -35856808 - L1ME1 LINE L1 -6 6160 5228 1986 139 10 0 chr10 109732480 109732789 -35856499 - AluSx SINE Alu 0 312 1 3908 196 53 42 chr10 109732789 109732890 -35856398 - L1ME1 LINE L1 -938 5228 5130 1876 135 0 61 chr10 109732890 109733217 -35856071 - AluSx SINE Alu -5 307 1 3908 196 53 42 chr10 109733217 109733892 -35855396 - L1ME1 LINE L1 -1036 5130 4417 2101 118 0 0 chr10 109733892 109734188 -35855100 - AluSx SINE Alu -16 296 1 3908 196 53 42 chr10 109734188 109734294 -35854994 - L1ME1 LINE L1 -1749 4417 4314 791 190 0 14 chr10 109734294 109734436 -35854852 - MER5A DNA MER1_type -49 140 1 280 331 85 52 chr10 109734461 109734896 -35854392 + L2 LINE L2 2344 2800 -514 1050 223 109 88 chr10 109734896 109735393 -35853895 + MLT1J LTR MaLR 5 511 0 280 331 85 52 chr10 109735393 109735461 -35853827 + L2 LINE L2 2800 2864 -450 184 343 15 0 chr10 109735576 109735643 -35853645 + L2 LINE L2 3016 3083 -189 184 316 42 42 chr10 109735707 109735802 -35853486 + L2 LINE L2 3219 3313 0 731 231 23 106 chr10 109736032 109736144 -35853144 - MIR SINE MIR -3 259 139 2265 95 0 0 chr10 109736144 109736448 -35852840 + AluSc SINE Alu 1 304 -5 731 231 23 106 chr10 109736448 109736599 -35852689 - MIR SINE MIR -123 139 18 234 288 83 61 chr10 109736627 109736759 -35852529 + L2 LINE L2 3133 3267 -5 4621 180 116 68 chr10 109736771 109738501 -35850787 + L1MD1 LINE L1 16 1924 -4616 3945 136 26 0 chr10 109738488 109739112 -35850176 + L1MC1 LINE L1 5544 6183 -150 * 6494 217 66 46 chr10 109739127 109741509 -35847779 + L1MD1 LINE L1 1912 4245 -2391 1580 174 46 0 chr10 109741509 109741790 -35847498 + AluSx SINE Alu 1 294 -18 6494 217 66 46 chr10 109741790 109742138 -35847150 + L1MD1 LINE L1 4245 4585 -2051 1862 155 0 22 chr10 109742138 109742455 -35846833 + AluJo SINE Alu 1 310 -2 6494 217 66 46 chr10 109742455 109742911 -35846377 + L1MD1 LINE L1 4585 5030 -1606 1994 123 0 7 chr10 109742911 109743235 -35846053 + AluSc SINE Alu 1 309 0 6494 217 66 46 chr10 109743235 109743372 -35845916 + L1MD1 LINE L1 5030 5163 -1473 806 183 0 0 chr10 109743372 109743503 -35845785 + FLAM_C SINE Alu 3 133 0 6494 217 66 46 chr10 109743503 109743742 -35845546 + L1MD1 LINE L1 5163 5396 -1240 1560 159 52 7 chr10 109743742 109744037 -35845251 + AluJb SINE Alu 1 307 0 6494 217 66 46 chr10 109744037 109744242 -35845046 + L1MD1 LINE L1 5396 5595 -1041 608 128 0 0 chr10 109744242 109744328 -35844960 + 7SLRNA srpRNA srpRNA 232 317 -3 6494 217 66 46 chr10 109744328 109744737 -35844551 + L1MD1 LINE L1 5595 5994 -642 1857 137 10 23 chr10 109744737 109745043 -35844245 + AluSx SINE Alu 1 302 -10 6494 217 66 46 chr10 109745043 109745380 -35843908 + L1MD1 LINE L1 5994 6636 0 2046 136 3 0 chr10 109745482 109745790 -35843498 + AluSx SINE Alu 1 309 -3 1532 169 11 4 chr10 109745950 109746056 -35843232 + AluJb SINE Alu 17 121 -191 249 108 0 0 chr10 109746056 109746093 -35843195 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 1532 169 11 4 chr10 109746093 109746259 -35843029 + AluJb SINE Alu 121 291 -21 22 56 0 0 chr10 109746568 109746604 -35842684 + AT_rich Low_complexity Low_complexity 1 36 0 518 208 0 8 chr10 109746695 109746820 -35842468 + CT-rich Low_complexity Low_complexity 1 124 0 2168 92 7 0 chr10 109746820 109747114 -35842174 - AluSx SINE Alu -16 296 1 2370 51 0 0 chr10 109747450 109747743 -35841545 + AluY SINE Alu 1 293 -18 345 191 0 15 chr10 109747930 109747998 -35841290 - MIR SINE MIR 0 262 196 1348 147 0 0 chr10 109748018 109748215 -35841073 - AluJb SINE Alu -30 282 86 703 155 0 9 chr10 109748215 109748357 -35840931 - FLAM_C SINE Alu 0 143 17 1177 164 4 40 chr10 109748376 109748602 -35840686 - AluJb SINE Alu -14 298 81 520 282 133 6 chr10 109748602 109748783 -35840505 - MIR SINE MIR -58 204 1 762 301 47 77 chr10 109749744 109749799 -35839489 + L2 LINE L2 2944 2999 -273 2354 83 0 0 chr10 109749799 109750101 -35839187 - AluSx SINE Alu -10 302 1 762 301 47 77 chr10 109750101 109750384 -35838904 + L2 LINE L2 2999 3272 0 280 182 11 102 chr10 109750791 109750879 -35838409 - MER103 DNA DNA -85 81 2 1474 232 61 0 chr10 109750906 109751199 -35838089 - MLT1A1 LTR MaLR -2 363 53 1442 200 109 9 chr10 109751240 109751560 -35837728 - MSTD LTR MaLR 0 396 45 2078 117 7 0 chr10 109751561 109751859 -35837429 - AluSx SINE Alu -12 300 1 634 270 89 44 chr10 109751985 109752233 -35837055 + MIR SINE MIR 4 262 0 812 255 115 17 chr10 109752982 109753217 -35836071 + MER112 DNA MER1_type 2 259 -1 230 274 15 118 chr10 109753415 109753488 -35835800 - L2 LINE L2 -16 3256 3177 1963 134 0 14 chr10 109753488 109753779 -35835509 + AluSx SINE Alu 1 287 -25 2512 55 0 0 chr10 109753787 109754096 -35835192 + AluY SINE Alu 1 309 -2 230 274 15 118 chr10 109754096 109754148 -35835140 - L2 LINE L2 -102 3170 3136 2272 96 0 0 chr10 109754358 109754660 -35834628 + AluSc SINE Alu 1 302 -7 417 298 58 99 chr10 109754744 109755240 -35834048 + L1MEd LINE L1 268 743 -5376 1905 159 0 3 chr10 109755244 109755553 -35833735 + AluJb SINE Alu 1 308 -4 581 165 0 8 chr10 109755555 109755682 -35833606 + GA-rich Low_complexity Low_complexity 3 128 0 578 264 93 69 chr10 109755684 109756573 -35832715 + L1MEd LINE L1 739 1758 -732 2308 93 0 7 chr10 109756818 109757107 -35832181 + AluSc SINE Alu 1 287 -22 536 318 38 13 chr10 109757296 109757611 -35831677 + L1MEd LINE L1 2093 2415 -3714 2140 103 3 24 chr10 109758685 109759004 -35830284 + AluSx SINE Alu 1 313 0 2562 235 91 16 chr10 109760020 109760884 -35828404 + L1MC4 LINE L1 7114 8042 0 248 200 17 0 chr10 109760919 109760979 -35828309 + L1MC5 LINE L1 7178 7238 -723 308 316 15 53 chr10 109760993 109761126 -35828162 + L1MC4a LINE L1 7231 7358 -450 1309 224 117 55 chr10 109761129 109761173 -35828115 + L1MC5 LINE L1 7271 7311 -650 2495 87 0 0 chr10 109761173 109761483 -35827805 + AluY SINE Alu 2 311 0 1309 224 117 55 chr10 109761483 109762004 -35827284 + L1MC5 LINE L1 7311 7871 -90 305 184 0 0 chr10 109762013 109762062 -35827226 + L1MC4 LINE L1 6655 6703 -1339 864 68 0 0 chr10 109762063 109762166 -35827122 - AluY SINE Alu -11 300 198 328 172 11 11 chr10 109763853 109763946 -35825342 + GA-rich Low_complexity Low_complexity 1 93 0 216 111 0 0 chr10 109764659 109764695 -35824593 + (TG)n Simple_repeat Simple_repeat 2 37 0 366 123 0 0 chr10 109764976 109765033 -35824255 + (TG)n Simple_repeat Simple_repeat 2 58 0 2078 133 7 0 chr10 109766537 109766822 -35822466 - AluSx SINE Alu -24 288 2 535 311 46 84 chr10 109769335 109770013 -35819275 + L2 LINE L2 2325 2976 -338 239 259 268 27 chr10 109770284 109770396 -35818892 + L2 LINE L2 3134 3272 0 815 262 23 5 chr10 109771102 109771316 -35817972 - MIR SINE MIR 0 262 45 198 0 0 0 chr10 109771589 109771611 -35817677 + (CCCCCG)n Simple_repeat Simple_repeat 4 25 0 31 0 0 0 chr10 109771667 109771698 -35817590 + GC_rich Low_complexity Low_complexity 1 31 0 202 224 30 30 chr10 109771862 109771929 -35817359 + G-rich Low_complexity Low_complexity 6 72 0 204 270 60 10 chr10 109771979 109772079 -35817209 + (CAGAGA)n Simple_repeat Simple_repeat 3 107 0 189 74 0 0 chr10 109772109 109772136 -35817152 + (TG)n Simple_repeat Simple_repeat 2 28 0 369 0 0 0 chr10 109772266 109772307 -35816981 + (TG)n Simple_repeat Simple_repeat 2 42 0 327 296 26 58 chr10 109773512 109773668 -35815620 - MIR3 SINE MIR -52 156 41 2370 101 0 3 chr10 109777955 109778253 -35811035 + AluSq SINE Alu 1 297 -16 1986 136 17 0 chr10 109778823 109779118 -35810170 + AluSx SINE Alu 1 300 -12 245 311 0 19 chr10 109780403 109780509 -35808779 + C-rich Low_complexity Low_complexity 3 106 0 186 103 0 0 chr10 109780510 109780539 -35808749 + (TC)n Simple_repeat Simple_repeat 1 29 0 459 0 0 0 chr10 109782042 109782093 -35807195 + (TG)n Simple_repeat Simple_repeat 2 52 0 2280 104 0 28 chr10 109782561 109782878 -35806410 - AluY SINE Alu -3 308 1 2109 134 0 14 chr10 109782886 109783177 -35806111 - AluSx SINE Alu -25 287 1 217 233 14 68 chr10 109783177 109783250 -35806038 + L2 LINE L2 3188 3256 -16 766 255 115 17 chr10 109783448 109783683 -35805605 - MER112 DNA MER1_type -1 259 2 631 270 89 44 chr10 109784432 109784680 -35804608 - MIR SINE MIR 0 262 4 2224 117 7 0 chr10 109784806 109785104 -35804184 + AluSx SINE Alu 1 300 -12 1347 203 109 9 chr10 109785105 109785425 -35803863 + MSTD LTR MaLR 45 396 0 1392 232 61 0 chr10 109785466 109785759 -35803529 + MLT1A1 LTR MaLR 53 363 -2 261 182 11 102 chr10 109785786 109785874 -35803414 + MER103 DNA DNA 2 81 -85 766 301 47 77 chr10 109786281 109786564 -35802724 - L2 LINE L2 0 3272 2999 2501 83 0 0 chr10 109786564 109786866 -35802422 + AluSx SINE Alu 1 302 -10 766 301 47 77 chr10 109786866 109786921 -35802367 - L2 LINE L2 -273 2999 2944 514 282 133 6 chr10 109787882 109788063 -35801225 + MIR SINE MIR 1 204 -58 1286 164 4 40 chr10 109788063 109788289 -35800999 + AluJb SINE Alu 81 298 -14 717 155 0 9 chr10 109788308 109788450 -35800838 + FLAM_C SINE Alu 17 143 0 1448 147 0 0 chr10 109788450 109788647 -35800641 + AluJb SINE Alu 86 282 -30 340 191 0 15 chr10 109788667 109788735 -35800553 + MIR SINE MIR 196 262 0 2502 51 0 0 chr10 109788922 109789215 -35800073 - AluY SINE Alu -18 293 1 2311 92 7 0 chr10 109789551 109789845 -35799443 + AluSx SINE Alu 1 296 -16 518 208 0 8 chr10 109789845 109789970 -35799318 + GA-rich Low_complexity Low_complexity 1 124 0 22 56 0 0 chr10 109790061 109790097 -35799191 + AT_rich Low_complexity Low_complexity 1 36 0 1663 169 11 4 chr10 109790406 109790572 -35798716 - AluJb SINE Alu -21 291 121 249 108 0 0 chr10 109790572 109790609 -35798679 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 1663 169 11 4 chr10 109790609 109790715 -35798573 - AluJb SINE Alu -191 121 17 2199 136 3 0 chr10 109790875 109791183 -35798105 - AluSx SINE Alu -3 309 1 1652 179 39 18 chr10 109791285 109791621 -35797667 - L1MD1 LINE L1 0 6242 5900 223 167 0 0 chr10 109791863 109791905 -35797383 + (TG)n Simple_repeat Simple_repeat 1 42 0 339 262 77 27 chr10 109792255 109792401 -35796887 + MIR3 SINE MIR 33 185 -23 642 266 161 14 chr10 109793685 109793903 -35795385 + MIR SINE MIR 12 261 -1 505 314 120 8 chr10 109793942 109794184 -35795104 - L3 LINE CR1 -5 1572 1304 2564 75 0 0 chr10 109794847 109795154 -35794134 + AluY SINE Alu 1 307 -4 389 191 0 57 chr10 109795429 109795534 -35793754 - MER33 DNA MER1_type -1 323 225 2050 107 0 38 chr10 109795539 109795856 -35793432 + AluSc SINE Alu 1 306 0 805 194 0 0 chr10 109795861 109795995 -35793293 - AluJo SINE Alu -178 134 1 1973 120 0 76 chr10 109796018 109796334 -35792954 + AluSx SINE Alu 1 292 -20 831 171 0 53 chr10 109796339 109796491 -35792797 - FAM SINE Alu -9 40 1 1977 148 7 3 chr10 109796511 109796808 -35792480 - AluJo SINE Alu -14 298 1 1031 161 49 22 chr10 109796813 109797037 -35792251 - MER33 DNA MER1_type -94 230 1 237 167 0 0 chr10 109798349 109798397 -35790891 + Alu SINE Alu 252 299 -1 375 187 13 13 chr10 109798460 109798535 -35790753 - L2 LINE L2 -16 3256 3182 254 355 99 20 chr10 109799011 109799467 -35789821 + L2 LINE L2 1902 2393 -921 * 501 254 76 0 chr10 109799435 109799553 -35789735 - L2 LINE L2 -1 3271 3145 1560 210 46 73 chr10 109799855 109800217 -35789071 + MLT1C LTR MaLR 5 352 -115 1988 157 3 3 chr10 109800217 109800516 -35788772 - AluSx SINE Alu -13 299 1 1560 210 46 73 chr10 109800516 109800629 -35788659 + MLT1C LTR MaLR 352 467 0 326 238 12 150 chr10 109800696 109800783 -35788505 - MIR SINE MIR -43 219 162 2183 115 0 0 chr10 109800783 109801087 -35788201 - AluSg SINE Alu -6 304 1 326 238 12 150 chr10 109801087 109801159 -35788129 - MIR SINE MIR -100 162 82 307 220 0 0 chr10 109801592 109801651 -35787637 + MIR SINE MIR 117 175 -87 343 263 0 0 chr10 109802025 109802105 -35787183 + MLT1K LTR MaLR 509 588 0 202 205 0 0 chr10 109802116 109802155 -35787133 + L2 LINE L2 3263 3301 -12 1931 146 19 13 chr10 109802342 109802650 -35786638 + AluSx SINE Alu 1 310 -2 214 219 16 154 chr10 109804260 109804383 -35784905 + MER5A DNA MER1_type 82 187 -2 377 321 77 41 chr10 109804529 109804725 -35784563 + MIR SINE MIR 9 211 -51 693 286 79 22 chr10 109804796 109805023 -35784265 - MIR SINE MIR -21 241 2 536 270 137 17 chr10 109805166 109805399 -35783889 - MIR SINE MIR 0 262 2 216 135 0 0 chr10 109805470 109805507 -35783781 + (TCCA)n Simple_repeat Simple_repeat 4 40 0 2379 74 3 3 chr10 109805884 109806181 -35783107 + AluY SINE Alu 1 297 -14 2505 78 0 10 chr10 109806287 109806595 -35782693 - AluSp SINE Alu -8 305 1 198 264 38 0 chr10 109806641 109806694 -35782594 - L2 LINE L2 -28 3285 3231 411 314 10 0 chr10 109807193 109807295 -35781993 - L3 LINE CR1 -106 1471 1369 1895 170 0 0 chr10 109807308 109807596 -35781692 + AluJb SINE Alu 1 288 -24 328 288 102 17 chr10 109807821 109807939 -35781349 + L2 LINE L2 3140 3267 -5 567 288 12 12 chr10 109808068 109808231 -35781057 + MIR SINE MIR 78 240 -22 2199 122 6 3 chr10 109808791 109809103 -35780185 + AluSp SINE Alu 1 313 0 2325 103 0 7 chr10 109809437 109809738 -35779550 + AluSx SINE Alu 1 299 -13 464 321 33 27 chr10 109810319 109810349 -35778939 - MIR3 SINE MIR -4 204 176 2439 82 3 0 chr10 109810349 109810643 -35778645 + AluSx SINE Alu 1 295 -17 464 321 33 27 chr10 109810643 109810796 -35778492 - MIR3 SINE MIR -32 176 20 607 279 71 0 chr10 109811029 109811212 -35778076 - MIR SINE MIR -10 252 57 1829 152 29 0 chr10 109811514 109811818 -35777470 - AluSx SINE Alu 0 312 1 409 294 128 0 chr10 109812025 109812212 -35777076 + MIR SINE MIR 34 244 -18 183 42 0 0 chr10 109812411 109812435 -35776853 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 2017 91 8 0 chr10 109812438 109812691 -35776597 - AluSp SINE Alu -34 279 25 289 256 99 29 chr10 109812755 109812927 -35776361 - L1MC5 LINE L1 -271 7690 7507 316 271 118 14 chr10 109813131 109813275 -35776013 + MIR SINE MIR 95 253 -9 198 0 0 0 chr10 109813382 109813404 -35775884 + (CAGCC)n Simple_repeat Simple_repeat 4 25 0 230 333 108 0 chr10 109814161 109814290 -35774998 - MIR SINE MIR -34 228 86 192 77 0 0 chr10 109816443 109816469 -35772819 + (TG)n Simple_repeat Simple_repeat 1 26 0 2691 147 31 24 chr10 109816634 109817173 -35772115 + L1MB8 LINE L1 5630 6172 -6 2190 87 0 0 chr10 109817173 109817464 -35771824 + AluY SINE Alu 20 310 0 341 269 21 11 chr10 109817478 109817571 -35771717 - MIR SINE MIR -95 113 20 782 200 50 109 chr10 109819189 109819273 -35770015 + MLT1A1 LTR MaLR 1 88 -277 2452 94 0 0 chr10 109819273 109819581 -35769707 + AluSc SINE Alu 1 308 -1 782 200 50 109 chr10 109819581 109819889 -35769399 + MLT1A1 LTR MaLR 88 412 47 2094 92 55 0 chr10 109819889 109820160 -35769128 + AluSx SINE Alu 3 288 -24 236 29 0 29 chr10 109820170 109820204 -35769084 + (TAAA)n Simple_repeat Simple_repeat 3 35 0 782 200 50 109 chr10 109820204 109820250 -35769038 + MLT1A1 LTR MaLR 318 365 0 896 251 204 11 chr10 109820728 109821106 -35768182 + LTR33 LTR ERVL 18 468 -53 260 203 68 0 chr10 109821145 109821204 -35768084 + MIR SINE MIR 115 177 -85 322 335 87 0 chr10 109821291 109821452 -35767836 + MIR3 SINE MIR 32 206 -2 222 196 19 0 chr10 109821463 109821516 -35767772 - MIR SINE MIR -93 115 70 427 179 142 30 chr10 109822154 109822288 -35767000 + MIR SINE MIR 65 213 -49 481 270 88 58 chr10 109822318 109822490 -35766798 - MIR SINE MIR -26 236 54 2223 120 10 0 chr10 109822490 109822790 -35766498 + AluSx SINE Alu 1 303 -9 481 270 88 58 chr10 109822790 109822843 -35766445 - MIR SINE MIR -208 54 4 226 211 0 0 chr10 109824432 109824484 -35764804 + G-rich Low_complexity Low_complexity 1 52 0 2349 107 0 0 chr10 109824974 109825272 -35764016 - AluSx SINE Alu -14 298 1 491 283 66 7 chr10 109825294 109825446 -35763842 - MIR SINE MIR -57 205 45 488 277 45 19 chr10 109825483 109825638 -35763650 + MIR3 SINE MIR 30 188 -20 337 282 15 23 chr10 109826918 109827049 -35762239 - MIR SINE MIR -3 259 130 316 252 0 29 chr10 109827567 109827670 -35761618 + L2 LINE L2 3214 3313 0 211 265 0 0 chr10 109828671 109828720 -35760568 + G-rich Low_complexity Low_complexity 1 49 0 249 360 0 27 chr10 109828981 109829201 -35760087 + GA-rich Low_complexity Low_complexity 1 214 0 217 316 0 0 chr10 109829184 109829260 -35760028 + (CAGAGA)n Simple_repeat Simple_repeat 2 77 0 * 298 349 0 6 chr10 109829394 109829563 -35759725 + GA-rich Low_complexity Low_complexity 1 168 0 239 286 0 29 chr10 109829595 109829700 -35759588 + GA-rich Low_complexity Low_complexity 2 103 0 317 277 199 14 chr10 109830345 109830486 -35758802 + MIR3 SINE MIR 24 190 -18 341 291 39 10 chr10 109931365 109931468 -35657820 - MER5A DNA MER1_type -77 112 7 2247 112 0 0 chr10 109932161 109932457 -35656831 - AluSg1 SINE Alu -13 296 1 503 181 0 0 chr10 109932467 109932561 -35656727 - AluSx SINE Alu -7 302 209 1505 136 36 5 chr10 109932587 109932807 -35656481 - AluSx SINE Alu -85 227 1 180 200 22 22 chr10 109933293 109933338 -35655950 - MIR SINE MIR -108 154 110 420 313 207 5 chr10 109933419 109933636 -35655652 + MIR SINE MIR 2 262 0 233 132 0 38 chr10 109933808 109933861 -35655427 + (TATAA)n Simple_repeat Simple_repeat 1 51 0 346 298 9 9 chr10 109934346 109934460 -35654828 + GA-rich Low_complexity Low_complexity 2 115 0 508 300 91 35 chr10 109934984 109935214 -35654074 - MIR SINE MIR 0 262 20 229 291 99 13 chr10 109936132 109936283 -35653005 + L2 LINE L2 1254 1417 -1897 298 379 70 25 chr10 109936325 109936996 -35652292 + L2 LINE L2 1530 2230 -1084 410 293 83 54 chr10 109937375 109937447 -35651841 + MIR SINE MIR 2 70 -192 2397 95 3 0 chr10 109937447 109937743 -35651545 - AluSg SINE Alu -13 297 1 2302 118 0 0 chr10 109937743 109938039 -35651249 - AluSx SINE Alu -16 296 1 410 293 83 54 chr10 109938039 109938207 -35651081 + MIR SINE MIR 69 250 -12 515 280 34 23 chr10 109938410 109938585 -35650703 - MIR3 SINE MIR -29 179 3 180 77 0 0 chr10 109940159 109940185 -35649103 + (TCTCC)n Simple_repeat Simple_repeat 2 27 0 207 139 0 0 chr10 109940209 109940245 -35649043 + (TTC)n Simple_repeat Simple_repeat 1 36 0 267 310 20 16 chr10 109940368 109940574 -35648714 + CT-rich Low_complexity Low_complexity 1 206 0 200 296 19 0 chr10 109942303 109942357 -35646931 + GA-rich Low_complexity Low_complexity 5 59 0 421 230 22 72 chr10 109942624 109942763 -35646525 - MER94 DNA DNA -2 132 1 232 235 0 20 chr10 109943597 109943648 -35645640 - L2 LINE L2 -78 3235 3186 180 0 0 0 chr10 109944002 109944022 -35645266 + (T)n Simple_repeat Simple_repeat 1 20 0 499 275 84 11 chr10 109946153 109946331 -35642957 + MIR SINE MIR 2 192 -70 227 191 0 0 chr10 109948421 109948463 -35640825 + CT-rich Low_complexity Low_complexity 1 42 0 254 242 0 0 chr10 109949198 109949260 -35640028 + (CA)n Simple_repeat Simple_repeat 1 62 0 2217 136 7 0 chr10 109949438 109949747 -35639541 - AluSq SINE Alu -2 311 1 261 180 0 0 chr10 109951684 109951734 -35637554 + (TG)n Simple_repeat Simple_repeat 2 51 0 240 265 0 0 chr10 109953042 109953091 -35636197 + polypyrimidine Low_complexity Low_complexity 2 50 0 188 348 34 11 chr10 109954441 109954530 -35634758 - L3 LINE CR1 -34 1543 1453 407 327 32 6 chr10 109954601 109954757 -35634531 + MIR SINE MIR 20 179 -83 1473 266 42 29 chr10 109954878 109955325 -35633963 - L3 LINE CR1 -394 1183 731 22 0 0 0 chr10 109955541 109955563 -35633725 + AT_rich Low_complexity Low_complexity 1 22 0 321 292 108 8 chr10 109955584 109955714 -35633574 - L2 LINE L2 -23 3249 3107 819 228 109 26 chr10 109956463 109956774 -35632514 - L1ME4a LINE L1 -4 6117 5781 236 249 58 66 chr10 109957183 109957333 -35631955 + MIR SINE MIR 37 183 -25 323 244 0 58 chr10 109957593 109957679 -35631609 + MIR SINE MIR 51 131 -131 862 263 59 13 chr10 109957679 109957915 -35631373 + MIR SINE MIR 16 262 0 193 256 98 24 chr10 109957916 109957998 -35631290 + MIR SINE MIR 175 262 0 2126 136 0 13 chr10 109958448 109958758 -35630530 - AluJb SINE Alu -6 306 1 319 316 32 19 chr10 109958915 109959073 -35630215 + CT-rich Low_complexity Low_complexity 4 163 0 492 304 68 13 chr10 109959646 109959847 -35629441 + MIR SINE MIR 43 255 -7 496 296 113 13 chr10 109959868 109960098 -35629190 + MIR SINE MIR 3 255 -7 2201 97 34 10 chr10 109960129 109960427 -35628861 - AluSg SINE Alu -5 305 1 1998 147 16 0 chr10 109960606 109960912 -35628376 - AluJo SINE Alu -1 311 1 335 308 68 8 chr10 109961214 109961347 -35627941 - L1ME4a LINE L1 -9 6112 5972 320 292 20 16 chr10 109961548 109961698 -35627590 + MIR SINE MIR 102 247 -15 259 262 107 49 chr10 109961855 109961977 -35627311 + MIR3 SINE MIR 41 169 -39 774 265 83 4 chr10 109962149 109962379 -35626909 + MIR SINE MIR 13 260 -2 249 242 15 30 chr10 109963394 109963460 -35625828 + CT-rich Low_complexity Low_complexity 1 65 0 263 274 6 60 chr10 109963602 109963770 -35625518 + CT-rich Low_complexity Low_complexity 3 161 0 236 240 16 78 chr10 109964052 109964181 -35625107 + CT-rich Low_complexity Low_complexity 3 123 0 25 0 0 0 chr10 109964225 109964250 -35625038 + AT_rich Low_complexity Low_complexity 1 25 0 282 29 0 0 chr10 109964611 109964646 -35624642 + (CA)n Simple_repeat Simple_repeat 2 36 0 534 91 0 0 chr10 109965285 109965362 -35623926 + (TC)n Simple_repeat Simple_repeat 2 78 0 402 21 0 0 chr10 109965362 109965409 -35623879 + (CA)n Simple_repeat Simple_repeat 1 47 0 433 252 35 9 chr10 109967163 109967278 -35622010 + MIR3 SINE MIR 84 201 -7 202 182 0 0 chr10 109968113 109968146 -35621142 + (CACG)n Simple_repeat Simple_repeat 4 36 0 1298 147 22 4 chr10 109973252 109973477 -35615811 + MER30 DNA MER1_type 2 230 0 360 304 115 60 chr10 109973813 109974378 -35614910 + L1MEd LINE L1 242 837 -5282 2549 65 0 13 chr10 109974396 109974706 -35614582 + AluY SINE Alu 1 306 -5 438 239 18 18 chr10 109977579 109977688 -35611600 + MIR3 SINE MIR 93 201 -7 545 243 13 124 chr10 109979206 109979298 -35609990 + MIR SINE MIR 57 158 -104 2264 99 3 3 chr10 109979298 109979592 -35609696 + AluSx SINE Alu 1 294 -18 545 243 13 124 chr10 109979592 109979619 -35609669 + MIR SINE MIR 158 186 -76 2278 119 0 3 chr10 109979619 109979929 -35609359 + AluSq SINE Alu 1 309 -4 545 243 13 124 chr10 109979929 109980034 -35609254 + MIR SINE MIR 186 257 -5 298 348 78 0 chr10 109980615 109980754 -35608534 + MIR SINE MIR 45 187 -21 2313 103 17 0 chr10 109980769 109981069 -35608219 + AluSx SINE Alu 1 305 -7 261 259 204 9 chr10 109982799 109982907 -35606381 - L2 LINE L2 -6 3307 3179 303 388 48 14 chr10 109983242 109983533 -35605755 - L2 LINE L2 -574 2740 2440 501 58 0 0 chr10 109984686 109984755 -35604533 + (CA)n Simple_repeat Simple_repeat 2 70 0 25 65 0 0 chr10 109988173 109988219 -35601069 + GC_rich Low_complexity Low_complexity 1 46 0 207 88 29 0 chr10 109989249 109989283 -35600005 + (CCCCG)n Simple_repeat Simple_repeat 1 35 0 216 204 10 20 chr10 109989562 109989660 -35599628 + CT-rich Low_complexity Low_complexity 1 97 0 35 78 0 0 chr10 109989729 109989806 -35599482 + GC_rich Low_complexity Low_complexity 1 77 0 29 28 0 0 chr10 109990237 109990273 -35599015 + AT_rich Low_complexity Low_complexity 1 36 0 494 211 81 43 chr10 109991722 109991883 -35597405 - Charlie7 DNA MER1_type -1 2611 2445 424 193 80 0 chr10 109991888 109991976 -35597312 - Charlie7 DNA MER1_type -2513 99 5 1206 275 69 11 chr10 109992983 109993361 -35595927 + L2 LINE L2 2387 2786 -528 657 299 113 73 chr10 109993661 109994011 -35595277 + MLT1K LTR MaLR 58 436 -152 201 39 0 0 chr10 109994011 109994037 -35595251 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 657 299 113 73 chr10 109994037 109994191 -35595097 + MLT1K LTR MaLR 436 582 -6 260 310 45 70 chr10 109994222 109994422 -35594866 - L2 LINE L2 -527 2787 2593 417 254 116 22 chr10 109995703 109995841 -35593447 + MIR3 SINE MIR 58 208 0 641 238 112 36 chr10 109997111 109997334 -35591954 - MIR SINE MIR -3 259 20 23 0 0 0 chr10 109997563 109997586 -35591702 + AT_rich Low_complexity Low_complexity 1 23 0 421 296 117 58 chr10 109997586 109997877 -35591411 + L1MC4a LINE L1 6045 6352 -1456 1609 214 26 61 chr10 109997919 109998517 -35590771 + L1MC5 LINE L1 6499 6972 -836 559 134 0 0 chr10 109998528 109998654 -35590634 + AluSg/x SINE Alu 197 322 0 1107 223 146 55 chr10 109998664 109999225 -35590063 + L1MC5 LINE L1 7300 7911 -50 580 302 65 52 chr10 109999275 109999583 -35589705 + HAL1 LINE L1 583 894 -1613 2270 107 0 0 chr10 109999583 109999874 -35589414 + AluSx SINE Alu 1 291 -21 1066 157 25 0 chr10 110000018 110000177 -35589111 + AluSg/x SINE Alu 133 295 -15 362 251 21 144 chr10 110000177 110000297 -35588991 + HAL1 LINE L1 918 1009 -1498 2296 105 0 3 chr10 110000297 110000601 -35588687 - AluSg SINE Alu -7 303 1 362 251 21 144 chr10 110000601 110000667 -35588621 + HAL1 LINE L1 1009 1081 -1426 315 222 9 37 chr10 110000707 110000815 -35588473 + HAL1 LINE L1 2293 2397 -110 441 94 16 0 chr10 110000871 110000935 -35588353 + Tigger2 DNA MER2_type 1 65 -2653 * 2631 117 5 3 chr10 110000929 110001321 -35587967 + Tigger2 DNA MER2_type 2273 2665 -53 5304 88 11 5 chr10 110001329 110002110 -35587178 - L1PB1 LINE L1 -1 6150 5365 343 247 14 0 chr10 110002110 110002183 -35587105 + Tigger2 DNA MER2_type 2635 2708 -10 1585 158 4 4 chr10 110002206 110002453 -35586835 - AluJo SINE Alu -65 247 1 23 33 0 0 chr10 110002456 110002486 -35586802 + AT_rich Low_complexity Low_complexity 1 30 0 2162 104 26 10 chr10 110002486 110002794 -35586494 - AluSq SINE Alu 0 313 1 263 250 42 17 chr10 110002799 110002919 -35586369 - L1MC5 LINE L1 -32 7929 7807 32 67 0 0 chr10 110002929 110002989 -35586299 + AT_rich Low_complexity Low_complexity 1 60 0 387 242 84 0 chr10 110003091 110003186 -35586102 - MIR SINE MIR -32 230 128 1031 198 99 25 chr10 110003238 110003480 -35585808 - AluJo SINE Alu -9 303 44 1138 113 0 0 chr10 110003711 110003853 -35585435 + AluSq/x SINE Alu 1 142 -171 1836 102 8 0 chr10 110003859 110004133 -35585155 + AluSg SINE Alu 45 320 0 1764 328 94 17 chr10 110004138 110005032 -35584256 - L3 LINE CR1 -403 1174 212 460 279 55 48 chr10 110005178 110005508 -35583780 + L1ME4a LINE L1 5790 6121 0 255 254 132 26 chr10 110005867 110005981 -35583307 - MIR SINE MIR -118 144 19 1921 157 17 3 chr10 110006185 110006485 -35582803 - AluJo SINE Alu 0 312 9 498 308 88 16 chr10 110006899 110007081 -35582207 - MIR SINE MIR -59 203 9 180 77 0 0 chr10 110007168 110007194 -35582094 + (TTTTC)n Simple_repeat Simple_repeat 3 28 0 2454 73 33 0 chr10 110007199 110007500 -35581788 - AluSp SINE Alu -2 311 1 754 348 103 16 chr10 110007537 110008247 -35581041 + L2 LINE L2 1587 2358 -956 657 217 0 0 chr10 110008411 110008531 -35580757 - FLAM_A SINE Alu -13 120 1 36 0 0 0 chr10 110008744 110008780 -35580508 + AT_rich Low_complexity Low_complexity 1 36 0 872 143 0 0 chr10 110008786 110008919 -35580369 - FLAM_C SINE Alu 0 133 1 378 312 58 19 chr10 110008936 110009090 -35580198 - MIR SINE MIR -73 189 30 243 0 0 0 chr10 110009091 110009118 -35580170 + (CA)n Simple_repeat Simple_repeat 1 27 0 2365 103 0 0 chr10 110009341 110009641 -35579647 - AluSx SINE Alu -7 305 6 311 306 28 37 chr10 110009664 110009772 -35579516 - L2 LINE L2 -35 3278 3172 715 352 115 5 chr10 110009852 110010227 -35579061 + L3 LINE CR1 554 969 -608 278 289 48 29 chr10 110010392 110010496 -35578792 - MIR3 SINE MIR -44 164 59 526 187 45 22 chr10 110011619 110011753 -35577535 + MER91C DNA MER1_type 4 140 0 2177 183 75 27 chr10 110012229 110012679 -35576609 - MLT1D LTR MaLR -2 503 27 2080 142 75 50 chr10 110012679 110013095 -35576193 + MSTB LTR MaLR 1 426 0 2177 183 75 27 chr10 110013095 110013124 -35576164 - MLT1D LTR MaLR -478 27 1 732 264 87 45 chr10 110013398 110013575 -35575713 + LTR16C LTR ERVL 168 365 -126 2524 54 0 38 chr10 110013575 110013888 -35575400 - AluY SINE Alu -10 301 1 732 264 87 45 chr10 110013888 110014021 -35575267 + LTR16C LTR ERVL 365 491 0 249 200 0 33 chr10 110014279 110014339 -35574949 + L2 LINE L2 2303 2360 -954 526 297 107 36 chr10 110014368 110014752 -35574536 + L2 LINE L2 2031 2441 -873 2337 82 4 0 chr10 110014850 110015157 -35574131 - AluSx SINE Alu 0 308 1 258 350 143 14 chr10 110015300 110015594 -35573694 + L2 LINE L2 2941 3272 0 222 222 0 0 chr10 110016005 110016050 -35573238 + CT-rich Low_complexity Low_complexity 2 46 0 195 114 0 0 chr10 110016243 110016278 -35573010 + (TCTCC)n Simple_repeat Simple_repeat 5 39 0 347 363 103 26 chr10 110016702 110016834 -35572454 - L2 LINE L2 -24 3248 3128 1641 164 24 70 chr10 110016834 110017217 -35572071 - MLT1A1 LTR MaLR 0 365 1 347 363 103 26 chr10 110017217 110017314 -35571974 - L2 LINE L2 -144 3128 3040 2025 148 3 0 chr10 110017314 110017604 -35571684 + AluJo SINE Alu 1 291 -21 347 363 103 26 chr10 110017604 110017684 -35571604 - L2 LINE L2 -232 3040 2914 2060 144 0 7 chr10 110017823 110018122 -35571166 - AluSx SINE Alu -13 299 3 284 289 132 25 chr10 110018488 110018609 -35570679 + L2 LINE L2 3133 3266 -6 633 314 104 37 chr10 110018623 110019142 -35570146 + L2 LINE L2 2254 2807 -507 265 299 112 53 chr10 110019484 110019671 -35569617 + L2 LINE L2 3075 3272 0 2280 115 0 3 chr10 110019719 110020024 -35569264 + AluSx SINE Alu 1 304 -8 396 0 0 0 chr10 110020858 110020902 -35568386 + (CA)n Simple_repeat Simple_repeat 2 45 0 226 236 0 36 chr10 110021147 110021202 -35568086 + (CACG)n Simple_repeat Simple_repeat 3 55 0 201 217 0 43 chr10 110022605 110022674 -35566614 + (TCTCTG)n Simple_repeat Simple_repeat 2 67 0 284 198 27 54 chr10 110023395 110023506 -35565782 + (CAGAGA)n Simple_repeat Simple_repeat 2 109 0 368 266 83 70 chr10 110024431 110024534 -35564754 - MIR SINE MIR -1 261 161 1813 144 57 13 chr10 110024534 110024832 -35564456 + AluJb SINE Alu 1 311 -1 368 266 83 70 chr10 110024832 110024981 -35564307 - MIR SINE MIR -101 161 9 237 61 0 0 chr10 110026867 110026877 -35562411 + (GA)n Simple_repeat Simple_repeat 2 11 -23 2290 110 0 10 chr10 110026877 110027185 -35562103 + AluSx SINE Alu 1 305 -7 237 61 0 0 chr10 110027185 110027207 -35562081 + (GA)n Simple_repeat Simple_repeat 10 34 0 243 146 0 0 chr10 110027653 110027694 -35561594 + (GAAA)n Simple_repeat Simple_repeat 2 42 0 288 0 0 0 chr10 110031254 110031286 -35558002 + (CA)n Simple_repeat Simple_repeat 2 33 0 643 242 129 15 chr10 110031410 110031628 -35557660 + MIR SINE MIR 16 256 -6 639 249 23 23 chr10 110035033 110035210 -35554078 + MIR3 SINE MIR 27 203 -5 471 240 18 76 chr10 110037491 110037531 -35551757 - MIR3 SINE MIR 0 208 167 1268 156 15 104 chr10 110037531 110037857 -35551431 - AluSg1 SINE Alu -12 297 1 471 240 18 76 chr10 110037857 110037987 -35551301 - MIR3 SINE MIR -41 167 48 253 281 11 34 chr10 110038438 110038527 -35550761 - MIR SINE MIR -5 257 171 758 205 43 6 chr10 110038538 110038699 -35550589 - MIR SINE MIR -60 202 36 243 173 0 0 chr10 110039354 110039406 -35549882 + G-rich Low_complexity Low_complexity 1 52 0 323 282 119 45 chr10 110040282 110040484 -35548804 - L1M4 LINE L1 -2824 3322 3082 536 129 0 11 chr10 110040631 110040724 -35548564 + (TTCC)n Simple_repeat Simple_repeat 1 92 0 2025 135 10 7 chr10 110040724 110041021 -35548267 - AluSx SINE Alu -14 298 1 218 300 109 47 chr10 110041667 110041924 -35547364 + L2 LINE L2 2227 2499 -815 245 317 91 35 chr10 110042110 110042340 -35546948 + L2 LINE L2 2596 2838 -476 445 307 211 29 chr10 110042760 110043135 -35546153 - L2 LINE L2 0 3272 2830 369 291 38 29 chr10 110043320 110043530 -35545758 - L2 LINE L2 -705 2609 2398 201 241 0 17 chr10 110043969 110044027 -35545261 + C-rich Low_complexity Low_complexity 1 57 0 202 197 14 56 chr10 110044147 110044218 -35545070 + G-rich Low_complexity Low_complexity 1 68 0 228 270 45 9 chr10 110045265 110045376 -35543912 + MER102b DNA MER1_type 43 157 -184 2572 81 0 0 chr10 110045376 110045685 -35543603 + AluSc SINE Alu 1 309 0 1729 192 7 10 chr10 110045765 110046062 -35543226 - AluJb SINE Alu -16 296 1 2301 92 0 30 chr10 110046278 110046581 -35542707 - AluY SINE Alu -17 294 1 207 313 16 0 chr10 110046601 110046665 -35542623 - MIR SINE MIR -112 150 86 1575 214 58 26 chr10 110048191 110048620 -35540668 - LTR47B LTR ERVL 0 443 1 1647 192 30 30 chr10 110048903 110049205 -35540083 + AluJo SINE Alu 1 302 -10 348 356 56 11 chr10 110049690 110049870 -35539418 + MIR SINE MIR 50 237 -25 214 147 0 0 chr10 110050346 110050380 -35538908 + (TGGG)n Simple_repeat Simple_repeat 4 37 0 204 271 0 0 chr10 110051703 110051751 -35537537 + G-rich Low_complexity Low_complexity 5 52 0 1979 204 30 71 chr10 110052235 110052485 -35536803 - L1ME3 LINE L1 -2 6160 5901 2466 83 0 26 chr10 110052485 110052798 -35536490 + AluY SINE Alu 1 305 -6 1979 204 30 71 chr10 110052798 110053049 -35536239 - L1ME3 LINE L1 -261 5901 5682 925 188 6 6 chr10 110053049 110053219 -35536069 - FAM SINE Alu -4 171 2 1979 204 30 71 chr10 110053219 110053281 -35536007 - L1ME3 LINE L1 -480 5682 5619 316 195 146 0 chr10 110053307 110053389 -35535899 + L2 LINE L2 3203 3296 -17 1159 287 48 26 chr10 110053392 110054483 -35534805 + L1MC4a LINE L1 4525 5640 -522 516 72 0 0 chr10 110054516 110054585 -35534703 + (CA)n Simple_repeat Simple_repeat 2 70 0 662 232 0 0 chr10 110054695 110054820 -35534468 + MER63A DNA MER1_type 49 173 -37 351 228 87 97 chr10 110054852 110054906 -35534382 + L1MC4a LINE L1 5765 5818 -1990 1922 163 0 13 chr10 110054906 110055207 -35534081 + AluJb SINE Alu 1 297 -15 351 228 87 97 chr10 110055207 110055358 -35533930 + L1MC4a LINE L1 5818 5968 -1840 1962 153 0 14 chr10 110055629 110055924 -35533364 - AluSx SINE Alu -19 293 3 287 104 21 0 chr10 110056485 110056533 -35532755 + (TC)n Simple_repeat Simple_repeat 1 49 0 2173 111 0 36 chr10 110056947 110057254 -35532034 - AluSx SINE Alu -16 296 1 207 114 0 0 chr10 110057352 110057387 -35531901 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1817 160 14 14 chr10 110057389 110057671 -35531617 - AluJo SINE Alu -30 282 1 281 250 106 27 chr10 110058108 110058296 -35530992 - L1ME4a LINE L1 0 6121 5919 78 22 0 0 chr10 110058299 110058391 -35530897 + AT_rich Low_complexity Low_complexity 1 92 0 21 71 0 0 chr10 110058515 110058557 -35530731 + AT_rich Low_complexity Low_complexity 1 42 0 310 283 34 34 chr10 110059211 110059388 -35529900 - L1M4 LINE L1 -3292 2854 2678 2433 94 0 0 chr10 110059621 110059919 -35529369 + AluSq SINE Alu 2 299 -14 384 283 15 85 chr10 110060080 110060198 -35529090 - L1MC4a LINE L1 -1884 5924 5799 2072 129 3 13 chr10 110060198 110060500 -35528788 - AluSq SINE Alu -14 299 1 384 283 15 85 chr10 110060500 110060653 -35528635 - L1MC4a LINE L1 -2009 5799 5672 2357 76 21 0 chr10 110061141 110061432 -35527856 - AluSq SINE Alu -16 297 1 190 203 51 51 chr10 110062864 110062923 -35526365 - MIR SINE MIR -1 261 203 1445 154 51 8 chr10 110062924 110063158 -35526130 - AluJo SINE Alu -30 282 39 830 203 115 10 chr10 110063160 110063352 -35525936 - MIR SINE MIR -49 213 2 1954 133 32 3 chr10 110063353 110063638 -35525650 - AluJb SINE Alu -2 310 18 202 288 43 58 chr10 110063870 110064009 -35525279 - L2 LINE L2 -327 2945 2809 217 132 0 0 chr10 110064055 110064093 -35525195 + (TTTTTG)n Simple_repeat Simple_repeat 3 40 0 302 398 17 0 chr10 110064109 110064290 -35524998 - L2 LINE L2 -578 2736 2553 897 273 52 51 chr10 110064291 110064349 -35524939 + L1ME LINE L1 5257 5313 -857 2310 98 0 3 chr10 110064349 110064645 -35524643 + AluY SINE Alu 1 295 -16 897 273 52 51 chr10 110064645 110065120 -35524168 + L1ME LINE L1 5313 5791 -379 346 262 33 109 chr10 110065460 110065670 -35523618 - L2 LINE L2 -791 2523 2330 654 242 82 18 chr10 110066094 110066313 -35522975 + L1MC/D LINE L1 5583 5815 -1993 2067 155 0 0 chr10 110066322 110066626 -35522662 + AluSx SINE Alu 1 304 -8 1726 149 83 3 chr10 110066635 110066923 -35522365 + AluJb SINE Alu 2 312 0 2157 108 11 0 chr10 110067052 110067362 -35521926 - AluSx SINE Alu 0 313 1 227 214 54 0 chr10 110067362 110067418 -35521870 - L1MC/D LINE L1 -1916 5892 5834 186 159 159 0 chr10 110067447 110067491 -35521797 - MIR SINE MIR -26 236 186 2262 120 0 0 chr10 110067511 110067812 -35521476 + AluSx SINE Alu 1 301 -11 562 77 17 3 chr10 110067815 110067903 -35521385 - HY3 scRNA scRNA -1 100 16 626 249 18 30 chr10 110067909 110068078 -35521210 - MIR SINE MIR -82 180 14 759 250 53 20 chr10 110068101 110068345 -35520943 - L1MC4a LINE L1 -1976 5832 5581 336 204 130 9 chr10 110068653 110068761 -35520527 + MER102b DNA MER1_type 170 290 -51 446 267 9 9 chr10 110068813 110068929 -35520359 + MIR SINE MIR 146 261 -1 250 246 33 0 chr10 110068989 110069050 -35520238 + MER102b DNA MER1_type 278 340 -1 318 118 0 0 chr10 110069063 110069114 -35520174 - MER102b DNA MER1_type -204 137 87 1678 173 4 0 chr10 110069137 110069397 -35519891 + AluJo SINE Alu 1 261 -51 501 246 63 63 chr10 110069448 110069700 -35519588 + MER112 DNA MER1_type 1 252 -8 613 230 56 14 chr10 110069863 110070076 -35519212 - MER113 DNA MER1_type? -295 226 5 745 168 0 0 chr10 110072264 110072389 -35516899 - FLAM_C SINE Alu -8 125 1 194 340 57 14 chr10 110072618 110072759 -35516529 - MIR SINE MIR -6 256 110 693 225 6 0 chr10 110073550 110073710 -35515578 - FRAM SINE Alu 0 40 1 2209 108 0 7 chr10 110073800 110074152 -35515136 + AluSq SINE Alu 1 350 0 273 29 0 0 chr10 110074800 110074834 -35514454 + (CA)n Simple_repeat Simple_repeat 2 35 0 425 304 0 43 chr10 110075054 110075192 -35514096 - MIR3 SINE MIR -52 156 25 186 400 33 0 chr10 110076457 110076547 -35512741 + MIR SINE MIR 22 114 -148 1675 97 25 0 chr10 110076576 110076814 -35512474 + AluSx SINE Alu 1 244 -68 563 230 91 10 chr10 110077422 110077516 -35511772 - MIR SINE MIR -10 252 167 1733 128 4 8 chr10 110077516 110077766 -35511522 - AluSx SINE Alu -63 249 1 563 230 91 10 chr10 110077766 110077860 -35511428 - MIR SINE MIR -95 167 52 553 258 81 11 chr10 110078046 110078232 -35511056 + MIR SINE MIR 10 208 -54 2275 96 0 0 chr10 110078983 110079264 -35510024 + AluSg SINE Alu 9 289 -21 878 292 39 61 chr10 110079300 110079859 -35509429 - L1MC4a LINE L1 -337 5825 5331 2079 142 3 0 chr10 110079859 110080161 -35509127 - AluSx SINE Alu -7 305 3 878 292 39 61 chr10 110080161 110080234 -35509054 - L1MC4a LINE L1 -831 5331 5258 817 155 14 34 chr10 110080253 110080401 -35508887 + AluJo SINE Alu 1 145 -167 206 312 23 23 chr10 110081100 110081273 -35508015 + CT-rich Low_complexity Low_complexity 2 174 0 23 0 0 0 chr10 110081548 110081571 -35507717 + GC_rich Low_complexity Low_complexity 1 23 0 25 51 0 0 chr10 110081821 110081860 -35507428 + GC_rich Low_complexity Low_complexity 1 39 0 192 77 0 0 chr10 110081926 110081952 -35507336 + (CGG)n Simple_repeat Simple_repeat 2 27 0 23 54 0 0 chr10 110082161 110082198 -35507090 + GC_rich Low_complexity Low_complexity 1 37 0 1959 161 0 3 chr10 110083317 110083615 -35505673 - AluJb SINE Alu -14 298 2 1573 109 56 115 chr10 110083627 110083931 -35505357 - AluJb SINE Alu -11 301 16 321 274 148 48 chr10 110083963 110084401 -35504887 - L1MC4a LINE L1 -1164 4982 4501 611 293 59 5 chr10 110084421 110084643 -35504645 - L1ME LINE L1 -304 5817 5584 2240 109 10 3 chr10 110084804 110085107 -35504181 - AluSx SINE Alu -7 305 1 201 39 0 0 chr10 110085700 110085726 -35503562 + (TG)n Simple_repeat Simple_repeat 2 27 0 1781 191 10 0 chr10 110086944 110087247 -35502041 - AluJo SINE Alu -6 306 1 353 259 0 0 chr10 110092915 110092996 -35496292 + L2 LINE L2 3229 3309 -4 316 165 45 0 chr10 110093506 110093573 -35495715 + MIR SINE MIR 105 173 -62 306 50 0 0 chr10 110094316 110094356 -35494932 + (TTTTA)n Simple_repeat Simple_repeat 5 44 0 657 264 60 0 chr10 110094592 110094774 -35494514 - AluJo SINE Alu -13 299 107 2619 147 8 17 chr10 110094774 110095242 -35494046 - L1MB7 LINE L1 -27 6157 5694 198 264 144 24 chr10 110095245 110095370 -35493918 + MIR SINE MIR 120 259 -3 2522 82 0 0 chr10 110095539 110095844 -35493444 - AluY SINE Alu -6 305 1 199 226 97 32 chr10 110096054 110096116 -35493172 + MIR SINE MIR 124 189 -73 * 733 155 91 53 chr10 110096113 110096300 -35492988 + L2 LINE L2 3115 3308 -5 1889 152 0 0 chr10 110097035 110097298 -35491990 - AluJb SINE Alu -41 271 9 2125 95 40 0 chr10 110097692 110097998 -35491290 + AluSx SINE Alu 1 317 0 2098 92 0 15 chr10 110098013 110098331 -35490957 + AluSc SINE Alu 13 326 0 622 232 83 0 chr10 110098331 110098499 -35490789 + MIR SINE MIR 81 262 0 218 304 0 0 chr10 110099530 110099586 -35489702 + (TCCA)n Simple_repeat Simple_repeat 1 56 0 704 167 48 0 chr10 110099712 110099880 -35489408 + CT-rich Low_complexity Low_complexity 1 176 0 278 118 39 0 chr10 110099994 110100045 -35489243 + CT-rich Low_complexity Low_complexity 2 54 0 641 173 0 0 chr10 110100048 110100152 -35489136 - FLAM_C SINE Alu -38 105 2 2591 61 0 3 chr10 110101434 110101746 -35487542 + AluY SINE Alu 1 311 0 24 0 0 0 chr10 110101966 110101990 -35487298 + AT_rich Low_complexity Low_complexity 1 24 0 378 0 0 0 chr10 110103224 110103266 -35486022 + (TTA)n Simple_repeat Simple_repeat 1 42 0 475 156 0 0 chr10 110103266 110103343 -35485945 - AluJ/FLAM SINE Alu -234 78 2 554 202 50 8 chr10 110103401 110103520 -35485768 - MIR SINE MIR -3 259 136 332 132 0 44 chr10 110103528 110103596 -35485692 - Alu SINE Alu 0 302 238 874 145 0 0 chr10 110103632 110103763 -35485525 - FLAM_C SINE Alu -2 141 11 406 293 15 15 chr10 110103770 110103903 -35485385 - MIR SINE MIR -112 150 18 26 0 0 0 chr10 110104256 110104282 -35485006 + AT_rich Low_complexity Low_complexity 1 26 0 241 236 0 0 chr10 110104343 110104398 -35484890 + FAM SINE Alu 116 170 -5 1856 151 18 0 chr10 110104404 110104689 -35484599 + AluSc SINE Alu 3 292 -17 411 261 138 31 chr10 110104689 110104865 -35484423 + L1MC4 LINE L1 7689 7845 -197 1847 145 32 0 chr10 110104865 110105024 -35484264 - AluJb SINE Alu -21 291 118 220 27 54 0 chr10 110105024 110105061 -35484227 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1847 145 32 0 chr10 110105061 110105183 -35484105 - AluJb SINE Alu -194 118 1 411 261 138 31 chr10 110105183 110105324 -35483964 + L1MC4 LINE L1 7845 8040 -2 632 326 101 58 chr10 110105333 110105436 -35483852 + L1M4 LINE L1 4257 4354 -1792 1745 137 49 21 chr10 110105436 110105744 -35483544 + AluJb SINE Alu 4 319 0 632 326 101 58 chr10 110105744 110106134 -35483154 + L1M4 LINE L1 4354 4774 -1372 2381 90 0 7 chr10 110106134 110106434 -35482854 + AluSx SINE Alu 3 300 -12 921 164 0 0 chr10 110106472 110106612 -35482676 + FLAM_A SINE Alu 2 141 -1 26 30 0 0 chr10 110108064 110108097 -35481191 + GC_rich Low_complexity Low_complexity 1 33 0 323 23 23 0 chr10 110111724 110111768 -35477520 + (TG)n Simple_repeat Simple_repeat 1 45 0 626 292 44 35 chr10 110116239 110116381 -35472907 - MIR SINE MIR -15 247 101 1811 72 0 0 chr10 110116381 110116603 -35472685 + AluSq SINE Alu 1 222 -91 626 292 44 35 chr10 110116603 110116686 -35472602 - MIR SINE MIR -161 101 20 1654 162 33 4 chr10 110117301 110117573 -35471715 + AluJb SINE Alu 1 280 -32 716 10 29 10 chr10 110117573 110117675 -35471613 + (GAAA)n Simple_repeat Simple_repeat 4 107 0 184 367 100 40 chr10 110117811 110117961 -35471327 - MER5A DNA MER1_type 0 189 31 2237 108 0 17 chr10 110121941 110122265 -35467023 + AluSq SINE Alu 1 319 0 993 306 51 10 chr10 110122367 110122762 -35466526 - ERVL LTR ERVL -417 5347 4937 288 290 194 14 chr10 110123067 110123284 -35466004 - MLT1J1 LTR MaLR -125 321 66 265 51 0 51 chr10 110123255 110123294 -35465994 - MLT1J LTR MaLR -355 133 59 * 460 306 37 50 chr10 110123532 110123733 -35465555 - ERVL LTR ERVL -1411 4243 4027 1704 153 68 0 chr10 110123733 110124014 -35465274 - AluJb SINE Alu -12 300 1 460 306 37 50 chr10 110124014 110124118 -35465170 - ERVL LTR ERVL -1627 4027 3923 1858 134 28 17 chr10 110124321 110124637 -35464651 + AluSg SINE Alu 1 319 0 1416 166 17 63 chr10 110125496 110125798 -35463490 - AluJo SINE Alu -4 308 21 414 0 0 0 chr10 110126442 110126488 -35462800 + (CA)n Simple_repeat Simple_repeat 1 46 0 24 0 0 29 chr10 110126908 110126923 -35462365 + AT_rich Low_complexity Low_complexity 1 15 -19 1706 119 0 140 chr10 110126923 110127258 -35462030 + AluSx SINE Alu 2 289 -23 24 0 0 29 chr10 110127258 110127277 -35462011 + AT_rich Low_complexity Low_complexity 15 34 0 183 42 0 0 chr10 110127404 110127428 -35461860 + (TTTG)n Simple_repeat Simple_repeat 4 27 0 2019 128 3 7 chr10 110127430 110127720 -35461568 - AluSx SINE Alu -23 289 1 1909 136 14 28 chr10 110128162 110128448 -35460840 - AluJo SINE Alu -30 282 1 1213 86 0 0 chr10 110128463 110128646 -35460642 - AluY SINE Alu 0 313 131 1877 144 11 22 chr10 110128832 110129109 -35460179 + AluJo SINE Alu 9 282 -30 216 0 0 0 chr10 110129118 110129142 -35460146 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 363 118 0 0 chr10 110129537 110129588 -35459700 - MER66A LTR ERV1 -141 337 287 298 337 10 20 chr10 110129859 110129960 -35459328 + LTR67 LTR ERVL 99 198 -359 729 191 0 0 chr10 110130394 110130525 -35458763 - FLAM_C SINE Alu -2 131 1 506 261 55 40 chr10 110130550 110130749 -35458539 + MIR SINE MIR 8 209 -53 312 308 0 0 chr10 110130977 110131042 -35458246 - L2 LINE L2 -9 3263 3199 1611 221 87 45 chr10 110131528 110132074 -35457214 - MLT1F1 LTR MaLR -8 559 1 2716 158 33 21 chr10 110132376 110132856 -35456432 + MER66B LTR ERV1 1 486 0 313 249 74 69 chr10 110133832 110133980 -35455308 + L1MC4a LINE L1 5724 5875 -1933 1983 138 0 35 chr10 110133980 110134292 -35454996 + AluJb SINE Alu 12 312 0 313 249 74 69 chr10 110134292 110134332 -35454956 + L1MC4a LINE L1 5875 5913 -1895 206 245 0 0 chr10 110135206 110135255 -35454033 - L2 LINE L2 0 3272 3224 210 240 144 55 chr10 110136181 110136327 -35452961 + MIR SINE MIR 25 183 -79 687 197 0 0 chr10 110136912 110137044 -35452244 + FLAM_A SINE Alu 6 137 -5 415 221 0 0 chr10 110137094 110137171 -35452117 + AluJ/FRAM SINE Alu 214 290 -22 248 128 0 21 chr10 110137176 110137223 -35452065 + (GGAA)n Simple_repeat Simple_repeat 4 49 0 4601 81 4 25 chr10 110137341 110137454 -35451834 - L1MA3 LINE L1 -287 6018 5904 2311 118 0 3 chr10 110137454 110137760 -35451528 - AluSx SINE Alu -7 305 1 4601 81 4 25 chr10 110137760 110137844 -35451444 - L1MA3 LINE L1 -401 5904 5820 1986 152 10 0 chr10 110137844 110138140 -35451148 - AluSx SINE Alu -13 299 1 4601 81 4 25 chr10 110138140 110138621 -35450667 - L1MA3 LINE L1 -485 5820 5353 2345 105 0 0 chr10 110139014 110139309 -35449979 + AluSq SINE Alu 1 295 -18 2283 96 0 0 chr10 110139650 110139955 -35449333 + AluSx SINE Alu 1 305 0 259 290 127 69 chr10 110140109 110140502 -35448786 - MLT1K LTR MaLR -27 561 146 2440 191 72 98 chr10 110141831 110142079 -35447209 - L1MC4 LINE L1 0 8042 7789 207 0 0 0 chr10 110142079 110142102 -35447186 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1518 162 7 71 chr10 110142105 110142401 -35446887 - AluJb SINE Alu -35 277 1 2440 191 72 98 chr10 110142401 110142434 -35446854 - L1MC4 LINE L1 -255 7787 7755 2357 107 0 7 chr10 110142434 110142742 -35446546 + AluSx SINE Alu 1 306 -6 2440 191 72 98 chr10 110142742 110143352 -35445936 - L1MC4 LINE L1 -287 7755 7169 314 238 175 8 chr10 110143360 110143486 -35445802 - MIR SINE MIR -85 177 31 414 0 0 0 chr10 110143769 110143815 -35445473 + (CA)n Simple_repeat Simple_repeat 2 47 0 234 227 0 80 chr10 110144067 110144142 -35445146 + MER5A DNA MER1_type 3 71 -118 2258 114 0 0 chr10 110144147 110144445 -35444843 + AluSx SINE Alu 1 298 -14 830 165 0 0 chr10 110144457 110144578 -35444710 + FLAM_C SINE Alu 1 121 -22 1610 171 10 45 chr10 110144619 110144928 -35444360 + AluJb SINE Alu 1 298 -14 722 116 9 0 chr10 110145082 110145194 -35444094 - AluSp/q SINE Alu -31 282 170 402 230 0 0 chr10 110145196 110145270 -35444018 + L1MC/D LINE L1 5569 5642 -702 252 0 0 0 chr10 110145272 110145300 -35443988 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 2420 101 0 0 chr10 110145366 110145664 -35443624 - AluSx SINE Alu -14 298 1 4417 154 36 14 chr10 110145666 110146495 -35442793 - L1MC1 LINE L1 -3 6330 5484 1982 138 7 3 chr10 110146567 110146871 -35442417 + AluSx SINE Alu 1 305 0 686 144 0 0 chr10 110147363 110147467 -35441821 + AluJb SINE Alu 49 152 -160 975 225 131 79 chr10 110147517 110148036 -35441252 - LTR1B LTR ERV1 -219 607 62 994 164 13 0 chr10 110148072 110148224 -35441064 + AluJb SINE Alu 152 305 -7 1094 215 11 38 chr10 110148361 110148621 -35440667 + MER74A LTR ERVL 2 254 -304 3310 108 14 0 chr10 110148621 110149110 -35440178 + MER41B LTR ERV1 1 496 -139 667 233 69 25 chr10 110149119 110149321 -35439967 - LTR7 LTR ERV1 -2 448 238 897 150 24 26 chr10 110149429 110149638 -35439650 - LTR7 LTR ERV1 -189 261 1 3220 112 25 37 chr10 110149639 110150202 -35439086 - HERVH LTR ERV1 -1 7712 7157 * 13914 125 5 4 chr10 110150195 110152473 -35436815 - HERVH LTR ERV1 -1697 6016 3800 9221 133 1 16 chr10 110152461 110153772 -35435516 - HERVH LTR ERV1 -4126 3587 2301 * 2348 84 0 19 chr10 110153772 110154080 -35435208 + AluY SINE Alu 1 302 -9 9221 133 1 16 chr10 110154080 110154285 -35435003 - HERVH LTR ERV1 -5412 2301 2094 481 135 0 0 chr10 110154285 110154359 -35434929 - AluS SINE Alu -235 75 2 489 167 0 11 chr10 110154359 110154449 -35434839 + MER74B LTR ERVL 534 622 0 2493 90 0 0 chr10 110155982 110156292 -35432996 - AluSx SINE Alu 0 312 3 717 238 79 25 chr10 110156792 110156994 -35432294 - MIR SINE MIR -8 254 42 1632 144 4 0 chr10 110156995 110157224 -35432064 + AluSq SINE Alu 1 230 -83 1991 106 3 66 chr10 110157839 110158140 -35431148 - AluSx SINE Alu -30 282 1 290 225 115 84 chr10 110158358 110158549 -35430739 + LTR67 LTR ERVL 361 557 0 493 296 21 26 chr10 110158739 110158928 -35430360 + MER91B DNA MER1_type 1 188 -2 700 72 10 0 chr10 110158937 110159034 -35430254 + AluSp/q SINE Alu 165 262 -51 2163 117 0 0 chr10 110159430 110159752 -35429536 + AluSx SINE Alu 1 322 0 2217 136 3 0 chr10 110159764 110160074 -35429214 + AluSx SINE Alu 2 312 0 405 250 0 43 chr10 110160404 110160520 -35428768 - MLT1J LTR MaLR -42 469 359 1802 250 31 58 chr10 110160520 110160943 -35428345 - MLT2E LTR ERVL -1 627 224 1707 167 3 17 chr10 110160943 110161250 -35428038 + AluJb SINE Alu 1 303 0 1802 250 31 58 chr10 110161250 110161468 -35427820 - MLT2E LTR ERVL -404 224 2 1822 176 6 13 chr10 110161888 110162201 -35427087 + AluJb SINE Alu 1 311 -1 940 177 13 0 chr10 110162269 110162427 -35426861 - FRAM SINE Alu -19 157 1 825 285 96 111 chr10 110162430 110163130 -35426158 + L1MEc LINE L1 1039 1674 -988 1984 129 77 0 chr10 110163130 110163417 -35425871 + AluSx SINE Alu 1 309 -3 825 285 96 111 chr10 110163417 110163589 -35425699 + L1MEc LINE L1 1674 1847 -815 30 89 0 0 chr10 110163924 110164003 -35425285 + AT_rich Low_complexity Low_complexity 1 79 0 1946 150 27 0 chr10 110164112 110164405 -35424883 + AluSx SINE Alu 1 301 -11 613 271 61 58 chr10 110164407 110164768 -35424520 + L1MEc LINE L1 3053 3414 -2801 302 272 82 22 chr10 110164888 110165072 -35424216 + L1MEc LINE L1 3672 3866 -2349 * 1286 91 6 0 chr10 110165070 110165246 -35424042 + L1PA16 LINE L1 5811 5987 -179 469 138 0 0 chr10 110165251 110165316 -35423972 - AluS SINE Alu -246 66 2 459 208 38 19 chr10 110165351 110165457 -35423831 + FRAM SINE Alu 50 157 -19 2087 122 14 0 chr10 110165461 110165747 -35423541 + AluSc SINE Alu 1 290 -19 353 94 0 0 chr10 110165929 110165982 -35423306 + L1MA3 LINE L1 6253 6305 0 352 104 0 0 chr10 110166897 110166945 -35422343 + MSTB LTR MaLR 8 55 -371 2136 106 7 27 chr10 110166945 110167096 -35422192 + AluSx SINE Alu 1 145 -167 3577 62 2 5 chr10 110167096 110167545 -35421743 - LTR7 LTR ERV1 -2 448 1 2136 106 7 27 chr10 110167545 110167686 -35421602 + AluSx SINE Alu 145 287 -25 2362 153 18 38 chr10 110167710 110167864 -35421424 + MSTB LTR MaLR 42 198 -228 1755 162 32 0 chr10 110167864 110168148 -35421140 + AluJb SINE Alu 1 293 -19 2362 153 18 38 chr10 110168148 110168386 -35420902 + MSTB LTR MaLR 198 426 0 1897 153 3 13 chr10 110168502 110168803 -35420485 - AluJb SINE Alu -12 300 3 2978 99 12 10 chr10 110168875 110169126 -35420162 + MER41B LTR ERV1 219 473 -162 1623 69 9 14 chr10 110169126 110169344 -35419944 + AluY SINE Alu 83 299 -12 2978 99 12 10 chr10 110169344 110169508 -35419780 + MER41B LTR ERV1 473 635 0 1790 192 21 56 chr10 110169508 110169936 -35419352 + L1MD3 LINE L1 7582 7994 -1 2088 87 64 17 chr10 110169946 110170244 -35419044 + AluSx SINE Alu 1 312 0 240 35 0 0 chr10 110170458 110170487 -35418801 + (GGGA)n Simple_repeat Simple_repeat 4 32 0 225 317 0 0 chr10 110170646 110170728 -35418560 - L1ME3A LINE L1 -224 5946 5865 3075 126 19 15 chr10 110170793 110170878 -35418410 - L1MA9 LINE L1 0 6312 6229 4192 138 43 14 chr10 110170878 110171580 -35417708 - MER72 LTR ERV1 0 722 1 3075 126 19 15 chr10 110171580 110172006 -35417282 - L1MA9 LINE L1 -78 6234 5798 229 51 51 0 chr10 110172006 110172045 -35417243 + (TA)n Simple_repeat Simple_repeat 2 42 0 408 143 29 0 chr10 110172053 110172123 -35417165 - L1MB4 LINE L1 -29 6151 6080 * 3839 104 38 65 chr10 110172116 110172436 -35416852 - L1MB4 LINE L1 -58 6122 5795 2051 141 0 0 chr10 110172436 110172719 -35416569 - AluSx SINE Alu -29 283 1 3839 104 38 65 chr10 110172719 110173078 -35416210 - L1MB4 LINE L1 -385 5795 5461 471 147 13 0 chr10 110173078 110173153 -35416135 + HY5 scRNA scRNA 1 76 -8 387 224 164 8 chr10 110173199 110173333 -35415955 - L1ME3A LINE L1 -295 5875 5721 434 210 121 149 chr10 110173361 110173642 -35415646 - L1ME3A LINE L1 -504 5658 5386 535 229 56 28 chr10 110173642 110173786 -35415502 + MLT1K LTR MaLR 441 588 0 1561 168 19 8 chr10 110174222 110174484 -35414804 - AluJo SINE Alu -47 265 1 4133 76 14 9 chr10 110174592 110175145 -35414143 + L1PA10 LINE L1 5612 6167 -1 1681 199 84 0 chr10 110175264 110175585 -35413703 + MER7A DNA MER2_type 1 346 0 397 321 94 14 chr10 110175666 110176072 -35413216 - L1ME3A LINE L1 -306 5864 5419 1291 107 0 11 chr10 110176075 110176253 -35413035 - AluSq SINE Alu 0 313 138 586 264 60 21 chr10 110176266 110176547 -35412741 - L1ME3A LINE L1 -748 5398 5127 1930 147 0 56 chr10 110176565 110176885 -35412403 - AluJo SINE Alu -10 302 1 2350 91 0 7 chr10 110176921 110177219 -35412069 - AluSx SINE Alu -14 298 3 266 293 66 6 chr10 110177296 110177463 -35411825 - L1ME3A LINE L1 -1447 4699 4523 760 248 67 40 chr10 110177621 110177919 -35411369 - AluJb SINE Alu -3 309 4 240 35 0 0 chr10 110182656 110182685 -35406603 + (TTA)n Simple_repeat Simple_repeat 2 30 0 1769 137 0 15 chr10 110182689 110182959 -35406329 - AluJb SINE Alu -44 268 3 303 147 0 103 chr10 110182976 110183044 -35406244 - AluJ/FRAM SINE Alu -20 282 222 272 102 20 20 chr10 110183040 110183089 -35406199 - Alu SINE Alu -259 49 1 * 650 67 0 22 chr10 110183315 110183404 -35405884 + AluSc SINE Alu 203 289 -20 262 158 8 0 chr10 110183895 110183952 -35405336 + L1MA8 LINE L1 6233 6285 -6 2372 89 0 0 chr10 110183969 110184262 -35405026 + AluSq SINE Alu 2 294 -19 1973 158 7 0 chr10 110184268 110184572 -35404716 + AluSx SINE Alu 1 306 -6 219 208 125 14 chr10 110185669 110185741 -35403547 - MER5A DNA MER1_type -41 148 69 455 274 72 0 chr10 110185879 110186032 -35403256 + MIR SINE MIR 34 197 -65 2438 88 0 0 chr10 110186400 110186696 -35402592 + AluSq SINE Alu 1 296 -17 214 235 35 59 chr10 110187098 110187183 -35402105 + MIR SINE MIR 99 181 -81 514 199 219 7 chr10 110187855 110188001 -35401287 + MIR SINE MIR 19 195 -67 1027 271 39 16 chr10 110188071 110188377 -35400911 - MLT1J LTR MaLR -192 319 7 429 178 26 38 chr10 110188453 110188589 -35400699 - LTR45 LTR ERV1 -57 468 296 2407 83 13 16 chr10 110188834 110189146 -35400142 - AluSq SINE Alu -2 311 1 1406 221 43 6 chr10 110190460 110190786 -35398502 + MER46C DNA MER2_type 1 338 0 37 39 0 0 chr10 110192976 110193027 -35396261 + AT_rich Low_complexity Low_complexity 1 51 0 1293 189 13 4 chr10 110194094 110194322 -35394966 - AluJo SINE Alu -31 281 52 1418 168 62 0 chr10 110194322 110194416 -35394872 + AluJo SINE Alu 29 116 -196 198 0 0 0 chr10 110194416 110194438 -35394850 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 1418 168 62 0 chr10 110194438 110194587 -35394701 + AluJo SINE Alu 116 287 -25 1449 149 4 13 chr10 110195127 110195355 -35393933 - AluJb SINE Alu -21 291 66 2576 71 3 0 chr10 110195498 110195807 -35393481 - AluY SINE Alu -1 310 1 275 298 176 0 chr10 110196236 110196367 -35392921 - MIR SINE MIR 0 262 109 2225 123 3 0 chr10 110197164 110197473 -35391815 + AluSx SINE Alu 1 310 -2 904 181 11 11 chr10 110197717 110197894 -35391394 - AluJo SINE Alu -15 297 121 23 54 0 0 chr10 110198473 110198510 -35390778 + AT_rich Low_complexity Low_complexity 1 37 0 1634 152 76 0 chr10 110198572 110198848 -35390440 - AluJb SINE Alu -4 308 12 405 208 66 19 chr10 110198894 110199000 -35390288 - Alu SINE Alu -199 112 2 712 194 0 15 chr10 110199129 110199263 -35390025 - FLAM_A SINE Alu 0 133 2 2252 120 0 0 chr10 110199273 110199572 -35389716 - AluSx SINE Alu -13 299 1 1263 201 23 76 chr10 110199657 110200000 -35389288 - MLT1C LTR MaLR 0 467 143 629 156 127 12 chr10 110201652 110201825 -35387463 - Charlie7 DNA MER1_type 0 2612 2420 497 66 211 0 chr10 110201888 110201964 -35387324 - Charlie7 DNA MER1_type -2518 94 3 805 210 19 0 chr10 110202662 110202819 -35386469 + FRAM SINE Alu 1 160 -6 1934 159 3 7 chr10 110202819 110203115 -35386173 + AluJb SINE Alu 1 295 -17 2301 80 0 13 chr10 110203121 110203420 -35385868 + AluY SINE Alu 1 295 -16 4464 152 43 19 chr10 110203578 110204438 -35384850 - L1MB3 LINE L1 0 6183 5303 207 0 0 0 chr10 110204542 110204565 -35384723 + (CA)n Simple_repeat Simple_repeat 1 23 0 291 28 0 0 chr10 110204565 110204601 -35384687 + (GA)n Simple_repeat Simple_repeat 1 36 0 722 223 96 9 chr10 110205130 110205350 -35383938 + MIR SINE MIR 23 261 -1 604 275 287 27 chr10 110206696 110207100 -35382188 - MLT1J LTR MaLR -2 509 1 2189 120 0 0 chr10 110208208 110208500 -35380788 + AluSg SINE Alu 1 292 -18 851 136 0 16 chr10 110208642 110208767 -35380521 + FLAM_C SINE Alu 8 130 -13 463 252 63 100 chr10 110209090 110209189 -35380099 - L2 LINE L2 -39 3274 3173 261 0 0 0 chr10 110209189 110209218 -35380070 + (TG)n Simple_repeat Simple_repeat 1 29 0 463 252 63 100 chr10 110209218 110209388 -35379900 - L2 LINE L2 -140 3173 3015 201 170 27 170 chr10 110209392 110209504 -35379784 - L3 LINE CR1 -457 1120 1025 361 176 0 0 chr10 110209548 110209616 -35379672 + AluJ/FRAM SINE Alu 233 300 -2 400 295 0 0 chr10 110209623 110209752 -35379536 - L3 LINE CR1 -686 891 763 2109 120 3 0 chr10 110210160 110210475 -35378813 - AluSx SINE Alu 0 316 1 24 0 0 0 chr10 110210525 110210549 -35378739 + AT_rich Low_complexity Low_complexity 1 24 0 344 268 70 25 chr10 110210669 110210826 -35378462 - L1ME4a LINE L1 -223 5898 5735 2016 114 0 31 chr10 110211084 110211417 -35377871 - AluSx SINE Alu 0 325 2 23 68 0 0 chr10 110211519 110211563 -35377725 + AT_rich Low_complexity Low_complexity 1 44 0 2254 102 0 3 chr10 110211610 110211904 -35377384 + AluSg SINE Alu 1 293 -17 1610 155 85 7 chr10 110211915 110212186 -35377102 + AluSx SINE Alu 1 292 -20 2227 131 0 6 chr10 110212343 110212657 -35376631 - AluJb SINE Alu 0 312 1 2337 60 4 7 chr10 110212814 110213130 -35376158 - AluY SINE Alu 0 315 1 267 125 107 0 chr10 110213131 110213187 -35376101 - L1M3 LINE L1 -723 5448 5387 247 303 123 0 chr10 110213412 110213534 -35375754 + MIR SINE MIR 54 190 -72 212 57 0 29 chr10 110213552 110213587 -35375701 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 1247 174 114 0 chr10 110213588 110213807 -35375481 - AluJb SINE Alu -68 244 1 1875 159 10 7 chr10 110214105 110214406 -35374882 - AluSx SINE Alu -10 302 1 314 269 40 40 chr10 110215474 110215697 -35373591 + L1 LINE L1 4109 4331 -1815 776 206 67 6 chr10 110215721 110215886 -35373402 + AluJo SINE Alu 120 294 -18 2224 87 7 7 chr10 110215892 110216190 -35373098 + AluSx SINE Alu 1 298 -14 353 232 1 95 chr10 110216200 110216362 -35372926 + L1M LINE L1 5270 5420 -939 1757 158 0 7 chr10 110216867 110217158 -35372130 - AluJb SINE Alu -23 289 1 324 261 0 0 chr10 110217205 110217324 -35371964 + C-rich Low_complexity Low_complexity 4 122 0 216 0 0 0 chr10 110217324 110217348 -35371940 + (TTCC)n Simple_repeat Simple_repeat 1 24 0 1683 160 0 14 chr10 110217349 110217636 -35371652 - AluJo SINE Alu -29 283 1 730 224 84 6 chr10 110218199 110218378 -35370910 - MIR SINE MIR -1 261 69 1457 238 72 37 chr10 110218559 110218988 -35370300 - MER21B LTR ERV1 -57 806 363 2066 87 7 0 chr10 110219040 110219315 -35369973 - AluSx SINE Alu -35 277 1 552 175 10 10 chr10 110219318 110219421 -35369867 - AluJo/FLAM SINE Alu -205 107 5 845 229 138 98 chr10 110219454 110219781 -35369507 - MER21B LTR ERV1 -523 340 1 26 82 0 0 chr10 110219926 110219987 -35369301 + AT_rich Low_complexity Low_complexity 1 61 0 633 232 79 34 chr10 110220226 110220448 -35368840 + L1ME2 LINE L1 5944 6332 -2 2428 66 0 0 chr10 110220710 110221011 -35368277 + AluY SINE Alu 1 301 -10 2309 83 0 16 chr10 110221239 110221551 -35367737 + AluSx SINE Alu 1 307 -5 894 303 54 32 chr10 110222195 110222509 -35366779 - L2 LINE L2 -5 3308 2988 309 218 88 61 chr10 110222615 110222762 -35366526 - L1MC5 LINE L1 -46 7915 7765 1785 166 10 0 chr10 110222822 110223123 -35366165 - AluSx SINE Alu -8 304 1 318 106 0 21 chr10 110223826 110223873 -35365415 - Alu SINE Alu -7 293 248 22 0 0 0 chr10 110223873 110223895 -35365393 + AT_rich Low_complexity Low_complexity 1 22 0 25 31 0 0 chr10 110224345 110224377 -35364911 + AT_rich Low_complexity Low_complexity 1 32 0 359 302 50 50 chr10 110224409 110224591 -35364697 + MIR SINE MIR 26 207 -55 686 202 0 8 chr10 110224845 110224964 -35364324 + FLAM_A SINE Alu 1 118 -15 2138 80 0 14 chr10 110225101 110225390 -35363898 + AluY SINE Alu 5 289 -22 1954 145 0 0 chr10 110226095 110226392 -35362896 - AluSx SINE Alu -15 297 1 216 304 41 70 chr10 110226978 110227149 -35362139 + MIR SINE MIR 11 176 -86 2314 82 0 7 chr10 110227455 110227759 -35361529 + AluSq SINE Alu 1 302 -11 1602 201 72 2 chr10 110227870 110228219 -35361069 - LTR32 LTR ERVL 0 471 15 2107 92 3 3 chr10 110228459 110228751 -35360537 + AluSx SINE Alu 2 293 -19 2199 104 0 16 chr10 110228756 110229065 -35360223 + AluSx SINE Alu 1 304 -8 2232 95 0 0 chr10 110229153 110229447 -35359841 + AluSq SINE Alu 1 294 -19 2053 99 0 20 chr10 110229519 110229811 -35359477 - AluSg SINE Alu -19 291 6 782 112 80 32 chr10 110229847 110229972 -35359316 + FLAM_C SINE Alu 1 131 -2 2162 95 10 0 chr10 110230154 110230448 -35358840 - AluSx SINE Alu -15 297 1 1690 176 0 3 chr10 110230471 110230772 -35358516 + AluJo SINE Alu 1 300 -12 419 296 28 56 chr10 110230835 110231048 -35358240 - L1MC/D LINE L1 -2080 5728 5522 1485 197 7 14 chr10 110231158 110231437 -35357851 + AluJo SINE Alu 1 277 -35 2251 84 0 3 chr10 110231438 110231736 -35357552 - AluY SINE Alu -14 297 1 1295 187 7 51 chr10 110231982 110232122 -35357166 + AluJo SINE Alu 8 130 -182 2148 114 7 0 chr10 110232122 110232420 -35356868 + AluSx SINE Alu 1 300 -12 1295 187 7 51 chr10 110232420 110232573 -35356715 + AluJo SINE Alu 130 288 -24 198 103 0 0 chr10 110233043 110233072 -35356216 + (TTTC)n Simple_repeat Simple_repeat 3 31 0 1747 172 3 3 chr10 110233139 110233436 -35355852 + AluJo SINE Alu 1 297 -15 2190 93 6 31 chr10 110233834 110234155 -35355133 - AluSq SINE Alu 0 313 1 1219 127 0 0 chr10 110234385 110234574 -35354714 + AluSg/x SINE Alu 123 311 -1 3760 161 77 80 chr10 110236253 110237284 -35352004 - L1MB7 LINE L1 0 6184 5148 475 206 143 114 chr10 110237396 110237495 -35351793 - MER5A DNA MER1_type -6 183 75 2368 61 3 6 chr10 110237495 110237806 -35351482 - AluY SINE Alu -1 310 1 475 206 143 114 chr10 110237806 110237881 -35351407 - MER5A DNA MER1_type -114 75 4 306 50 0 0 chr10 110239326 110239366 -35349922 + (TG)n Simple_repeat Simple_repeat 1 40 0 23 33 0 0 chr10 110241256 110241286 -35348002 + AT_rich Low_complexity Low_complexity 1 30 0 180 111 0 0 chr10 110241522 110241549 -35347739 + (T)n Simple_repeat Simple_repeat 1 27 0 263 266 156 46 chr10 110241900 110242009 -35347279 - L2 LINE L2 -3 3310 3190 809 237 114 13 chr10 110242415 110242643 -35346645 + MIR SINE MIR 2 252 -10 21 0 0 0 chr10 110242810 110242831 -35346457 + AT_rich Low_complexity Low_complexity 1 21 0 180 77 0 0 chr10 110244299 110244325 -35344963 + (C)n Simple_repeat Simple_repeat 1 26 0 295 175 32 32 chr10 110244508 110244571 -35344717 + MIR SINE MIR 86 148 -114 238 259 12 24 chr10 110245914 110245999 -35343289 + (CCCCG)n Simple_repeat Simple_repeat 1 84 0 * 239 229 14 14 chr10 110245948 110246018 -35343270 + C-rich Low_complexity Low_complexity 2 71 0 199 113 38 0 chr10 110247042 110247095 -35342193 + (CA)n Simple_repeat Simple_repeat 1 55 0 180 0 0 0 chr10 110247613 110247633 -35341655 + (TG)n Simple_repeat Simple_repeat 1 20 0 1769 177 10 0 chr10 110250272 110250571 -35338717 - AluJo SINE Alu -9 303 2 1608 179 13 3 chr10 110250679 110250980 -35338308 + AluJo SINE Alu 1 304 -8 230 127 91 55 chr10 110250996 110251051 -35338237 - Tigger5 DNA MER2_type 0 2323 2267 322 151 110 14 chr10 110251095 110251168 -35338120 - MIR SINE MIR -64 198 119 875 145 0 36 chr10 110251326 110251464 -35337824 + FLAM_C SINE Alu 1 133 0 208 286 48 24 chr10 110251575 110251659 -35337629 - L2 LINE L2 -464 2850 2765 257 235 245 10 chr10 110251709 110251811 -35337477 + MER5A DNA MER1_type 41 166 -23 * 585 154 0 0 chr10 110251744 110251835 -35337453 - MER5A DNA MER1_type -88 101 11 339 208 231 23 chr10 110251909 110252039 -35337249 - MER103 DNA DNA -9 157 1 1525 100 29 125 chr10 110252073 110252424 -35336864 + AluYb8 SINE Alu 2 318 0 196 251 91 91 chr10 110252659 110252834 -35336454 - L2 LINE L2 -352 2962 2788 1562 126 138 0 chr10 110252866 110253120 -35336168 - AluJo SINE Alu -23 289 1 306 306 88 61 chr10 110253366 110253729 -35335559 - L2 LINE L2 -660 2654 2282 2731 138 45 11 chr10 110254240 110254682 -35334606 - LTR32 LTR ERVL 0 471 15 2060 76 0 0 chr10 110255883 110256147 -35333141 - AluSc SINE Alu -15 294 31 270 250 0 0 chr10 110257851 110257907 -35331381 + L2 LINE L2 3258 3313 0 619 262 48 85 chr10 110258064 110258272 -35331016 - MIR SINE MIR -1 261 64 1973 155 0 13 chr10 110258272 110258588 -35330700 + AluJb SINE Alu 1 312 0 619 262 48 85 chr10 110258588 110258650 -35330638 - MIR SINE MIR -198 64 1 660 275 248 32 chr10 110258777 110259007 -35330281 - L2 LINE L2 -518 2796 2617 2157 109 3 0 chr10 110259007 110259311 -35329977 + AluSx SINE Alu 1 305 -7 660 275 248 32 chr10 110259311 110259640 -35329648 - L2 LINE L2 -697 2617 2116 1793 148 0 30 chr10 110266518 110266815 -35322473 + AluJo SINE Alu 1 288 -24 239 340 31 89 chr10 110267652 110267943 -35321345 - L2 LINE L2 -55 3217 2944 1728 159 9 58 chr10 110268094 110268227 -35321061 + AluJb SINE Alu 1 139 -173 2195 57 13 40 chr10 110268227 110268518 -35320770 + AluY SINE Alu 1 285 -26 185 0 40 0 chr10 110268518 110268543 -35320745 + (TA)n Simple_repeat Simple_repeat 2 27 0 1728 159 9 58 chr10 110268550 110268700 -35320588 + AluJb SINE Alu 139 268 -44 2433 71 0 6 chr10 110268700 110269011 -35320277 - AluY SINE Alu -2 309 1 1728 159 9 58 chr10 110269011 110269053 -35320235 + AluJb SINE Alu 268 311 -1 213 285 132 49 chr10 110269054 110269198 -35320090 - L2 LINE L2 -267 3046 2891 2273 107 0 0 chr10 110269274 110269582 -35319706 - AluY SINE Alu -3 308 1 887 281 101 23 chr10 110270172 110270567 -35318721 - L2 LINE L2 -22 3291 2866 251 259 34 129 chr10 110271297 110271444 -35317844 - MER5A DNA MER1_type -2 187 55 203 263 8 128 chr10 110271329 110271462 -35317826 + MER5A DNA MER1_type 47 163 -26 * 2250 70 18 0 chr10 110272615 110272899 -35316389 + AluSg SINE Alu 1 289 -21 183 80 0 0 chr10 110273545 110273570 -35315718 + (CCCCG)n Simple_repeat Simple_repeat 3 27 0 21 0 0 0 chr10 110275969 110275990 -35313298 + GC_rich Low_complexity Low_complexity 1 21 0 201 189 38 0 chr10 110276260 110276313 -35312975 + G-rich Low_complexity Low_complexity 4 58 0 219 220 0 0 chr10 110276339 110276389 -35312899 + (CTGGGG)n Simple_repeat Simple_repeat 2 51 0 439 260 47 8 chr10 110279521 110279648 -35309640 + MIR SINE MIR 16 147 -61 425 294 29 41 chr10 110279657 110279827 -35309461 + MIR SINE MIR 4 171 -91 237 65 0 0 chr10 110280154 110280185 -35309103 + (TCC)n Simple_repeat Simple_repeat 2 32 0 1814 177 14 0 chr10 110280821 110281115 -35308173 + AluSx SINE Alu 1 298 -14 733 272 51 0 chr10 110281130 110281347 -35307941 + MIR SINE MIR 35 262 0 1003 82 8 8 chr10 110281360 110281494 -35307794 - AluSq/x SINE Alu -179 134 1 1510 178 8 0 chr10 110281504 110281751 -35307537 - AluJb SINE Alu -16 296 48 664 219 209 0 chr10 110282433 110282620 -35306668 - MIR SINE MIR -22 240 15 391 349 45 0 chr10 110282755 110282887 -35306401 + MIR SINE MIR 18 155 -107 29 28 0 0 chr10 110284298 110284334 -35304954 + AT_rich Low_complexity Low_complexity 1 36 0 2383 74 3 0 chr10 110286094 110286403 -35302885 - AluSp SINE Alu -3 310 1 1931 111 3 24 chr10 110286403 110286691 -35302597 - AluSx SINE Alu -29 283 1 200 191 0 0 chr10 110287030 110287072 -35302216 + (CTG)n Simple_repeat Simple_repeat 2 43 0 2000 97 24 3 chr10 110287547 110287837 -35301451 - AluSx SINE Alu -16 296 1 561 212 123 17 chr10 110288990 110289169 -35300119 - MIR SINE MIR -29 233 36 254 357 133 52 chr10 110289756 110290042 -35299246 - L2 LINE L2 -5 3267 2959 2295 81 3 28 chr10 110290335 110290655 -35298633 - AluSq SINE Alu -1 312 1 223 324 69 0 chr10 110290739 110290841 -35298447 - MER5B DNA MER1_type -17 161 53 230 191 0 15 chr10 110291168 110291236 -35298052 + (CA)n Simple_repeat Simple_repeat 2 68 0 295 329 122 36 chr10 110291762 110291961 -35297327 + L2 LINE L2 2983 3218 -95 252 0 0 0 chr10 110291961 110291989 -35297299 + (TG)n Simple_repeat Simple_repeat 1 28 0 295 329 122 36 chr10 110291989 110292093 -35297195 + L2 LINE L2 3218 3312 -1 183 326 74 7 chr10 110293017 110293152 -35296136 - L2 LINE L2 -459 2855 2712 294 323 54 6 chr10 110293175 110293342 -35295946 - L2 LINE L2 -1136 2178 2004 835 282 201 3 chr10 110293468 110293847 -35295441 + MLT1K LTR MaLR 12 465 -123 758 145 0 0 chr10 110293880 110293997 -35295291 - FLAM_A SINE Alu 0 142 26 1464 201 3 14 chr10 110293997 110294431 -35294857 + AluSq SINE Alu 1 313 0 371 271 107 7 chr10 110294435 110294575 -35294713 - MIR SINE MIR -108 154 1 302 284 0 0 chr10 110294814 110294895 -35294393 + G-rich Low_complexity Low_complexity 2 82 0 432 55 0 0 chr10 110296039 110296094 -35293194 + (TCC)n Simple_repeat Simple_repeat 2 56 0 1645 178 3 31 chr10 110296094 110296112 -35293176 - AluJo SINE Alu 0 312 295 2067 142 7 0 chr10 110296112 110296422 -35292866 - AluSx SINE Alu 0 312 1 1645 178 3 31 chr10 110296422 110296591 -35292697 - AluJo SINE Alu -17 295 135 2143 76 17 10 chr10 110296591 110296902 -35292386 - AluSp SINE Alu 0 313 1 1645 178 3 31 chr10 110296902 110297034 -35292254 - AluJo SINE Alu -177 135 1 240 319 159 6 chr10 110297259 110297422 -35291866 + L2 LINE L2 2823 3010 -303 605 207 195 12 chr10 110297427 110297596 -35291692 + L2 LINE L2 3112 3311 -2 329 295 34 60 chr10 110298063 110298212 -35291076 + MIR SINE MIR 50 194 -68 1241 150 0 40 chr10 110299089 110299256 -35290032 - AluJo SINE Alu -10 302 145 2284 106 3 0 chr10 110299256 110299568 -35289720 - AluSp SINE Alu 0 313 1 1241 150 0 40 chr10 110299568 110299627 -35289661 - AluJo SINE Alu -167 145 85 1744 172 3 10 chr10 110300738 110301028 -35288260 - AluJo SINE Alu -13 299 12 1055 126 66 6 chr10 110301129 110301296 -35287992 + AluJb SINE Alu 135 311 -1 261 0 0 0 chr10 110301332 110301361 -35287927 + (TG)n Simple_repeat Simple_repeat 2 30 0 436 281 63 113 chr10 110301454 110301702 -35287586 + L3 LINE CR1 1154 1413 -164 2150 130 3 0 chr10 110301702 110302003 -35287285 - AluSg SINE Alu -8 302 1 436 281 63 113 chr10 110302003 110302019 -35287269 + L3 LINE CR1 1413 1428 -149 2327 64 0 0 chr10 110302019 110302343 -35286945 - AluY SINE Alu 0 324 1 436 281 63 113 chr10 110302343 110302438 -35286850 + L3 LINE CR1 1428 1498 -79 2201 102 0 0 chr10 110302635 110302929 -35286359 - AluSx SINE Alu -16 296 3 441 0 0 0 chr10 110303160 110303209 -35286079 + (CA)n Simple_repeat Simple_repeat 1 49 0 465 293 166 3 chr10 110303504 110303943 -35285345 + L2 LINE L2 2562 3059 -213 794 273 16 0 chr10 110303971 110304154 -35285134 + MER5A DNA MER1_type 2 187 -2 263 301 82 34 chr10 110304207 110304353 -35284935 + L2 LINE L2 3160 3312 -1 1826 136 41 27 chr10 110304802 110304923 -35284365 + AluJo SINE Alu 1 119 -193 180 0 0 0 chr10 110304923 110304943 -35284345 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 1826 136 41 27 chr10 110304943 110305116 -35284172 + AluJo SINE Alu 119 299 -13 3616 198 23 81 chr10 110310029 110311057 -35278231 - LTR5 LTR ERVK 0 969 1 995 262 117 32 chr10 110314340 110314783 -35274505 - L2 LINE L2 -2 3311 2831 1925 142 10 3 chr10 110317083 110317379 -35271909 - AluSx SINE Alu -14 298 1 1972 122 3 28 chr10 110317995 110318315 -35270973 - AluJb SINE Alu 0 312 1 252 103 0 0 chr10 110318443 110318482 -35270806 - MADE1 DNA Mariner -41 39 1 252 103 0 0 chr10 110320586 110320625 -35268663 - MADE1 DNA Mariner -41 39 1 676 103 55 97 chr10 110320999 110321084 -35268204 - L1MB2 LINE L1 -7 6164 6077 856 144 0 0 chr10 110321084 110321209 -35268079 + FLAM_C SINE Alu 1 125 -8 477 90 0 0 chr10 110321211 110321278 -35268010 + (TA)n Simple_repeat Simple_repeat 2 68 0 676 103 55 97 chr10 110321278 110321354 -35267934 - L1MB2 LINE L1 -95 6076 6007 279 286 0 24 chr10 110321357 110321441 -35267847 + L2 LINE L2 3232 3313 0 2371 87 6 0 chr10 110322237 110322548 -35266740 - AluSp SINE Alu 0 313 1 394 202 11 11 chr10 110322548 110322637 -35266651 + MER119 DNA MER1_type 495 583 0 1588 184 19 32 chr10 110322672 110323052 -35266236 + AluJo SINE Alu 1 376 0 247 262 299 0 chr10 110325276 110325383 -35263905 + L2 LINE L2 3134 3272 0 395 310 114 6 chr10 110325630 110325788 -35263500 - MIR3 SINE MIR -33 175 1 2238 85 0 13 chr10 110326095 110326401 -35262887 + AluSx SINE Alu 1 302 -10 520 317 139 4 chr10 110327691 110327921 -35261367 + MIR SINE MIR 2 262 0 1788 126 7 24 chr10 110327946 110328240 -35261048 - AluJo SINE Alu -23 289 1 345 303 41 8 chr10 110328298 110328420 -35260868 - MER102b DNA MER1_type -25 316 191 1884 142 7 3 chr10 110328965 110329261 -35260027 + AluSx SINE Alu 1 297 -15 1782 172 0 7 chr10 110329266 110329569 -35259719 + AluJo SINE Alu 1 301 -11 1450 192 45 0 chr10 110329770 110330057 -35259231 - AluJo SINE Alu -12 300 1 2202 98 13 7 chr10 110330477 110330783 -35258505 + AluSx SINE Alu 1 308 -4 1326 168 34 0 chr10 110330804 110331042 -35258246 + AluJo SINE Alu 67 312 0 1314 311 49 8 chr10 110331157 110331627 -35257661 - LTR16C LTR ERVL 0 491 3 240 178 27 96 chr10 110331818 110331891 -35257397 - L2 LINE L2 -1018 2296 2229 887 159 0 0 chr10 110332119 110332251 -35257037 - FLAM_A SINE Alu -1 132 1 825 211 42 36 chr10 110332428 110332694 -35256594 + L1MD3 LINE L1 6091 7995 0 399 227 28 35 chr10 110332760 110332901 -35256387 + L1ME3A LINE L1 5463 5602 -568 582 200 26 0 chr10 110332901 110333016 -35256272 + FLAM_C SINE Alu 26 143 0 570 105 29 9 chr10 110333016 110333121 -35256167 + GA-rich Low_complexity Low_complexity 2 108 0 274 213 33 0 chr10 110333127 110333188 -35256100 + L1ME3A LINE L1 5588 5650 -520 576 251 43 55 chr10 110333189 110333246 -35256042 + L1ME3A LINE L1 5919 5975 -195 1625 183 7 17 chr10 110333246 110333572 -35255716 + AluJo SINE Alu 1 323 0 576 251 43 55 chr10 110333572 110333768 -35255520 + L1ME3A LINE L1 5975 6170 0 2093 123 13 0 chr10 110333795 110334103 -35255185 + AluSp SINE Alu 1 312 -1 2161 121 7 0 chr10 110334405 110334712 -35254576 - AluSx SINE Alu -3 309 1 1475 114 91 57 chr10 110334788 110335052 -35254236 + AluSx SINE Alu 40 312 0 2261 98 0 3 chr10 110335594 110335901 -35253387 - AluSx SINE Alu -6 306 1 526 158 0 32 chr10 110335932 110336027 -35253261 - AluJo SINE Alu -94 218 127 304 325 65 8 chr10 110336736 110336859 -35252429 - L2 LINE L2 -3 3269 3140 21 0 0 0 chr10 110337657 110337678 -35251610 + GC_rich Low_complexity Low_complexity 1 21 0 201 240 0 40 chr10 110339090 110339165 -35250123 + (CTG)n Simple_repeat Simple_repeat 3 74 0 220 26 103 0 chr10 110343632 110343671 -35245617 + G-rich Low_complexity Low_complexity 3 45 0 399 224 23 52 chr10 110344643 110344784 -35244504 + (TATG)n Simple_repeat Simple_repeat 4 141 -31 2066 89 36 4 chr10 110344784 110345065 -35244223 - AluSx SINE Alu -22 290 1 399 224 23 52 chr10 110345065 110345097 -35244191 + (TATG)n Simple_repeat Simple_repeat 141 172 0 939 176 12 6 chr10 110345341 110345533 -35243755 - AluJo SINE Alu 0 309 117 1286 149 40 40 chr10 110345583 110345832 -35243456 + AluJo SINE Alu 21 269 -43 210 167 0 24 chr10 110345835 110345877 -35243411 - L2 LINE L2 -83 3230 3190 219 265 24 24 chr10 110346410 110346493 -35242795 + (TTGGGG)n Simple_repeat Simple_repeat 2 84 0 833 160 0 0 chr10 110347256 110347381 -35241907 - FLAM_A SINE Alu -8 125 1 854 162 30 30 chr10 110347862 110348029 -35241259 - FRAM SINE Alu -4 172 6 381 257 160 6 chr10 110348031 110348206 -35241082 + MIR SINE MIR 61 262 0 239 200 18 18 chr10 110350304 110350359 -35238929 + GA-rich Low_complexity Low_complexity 4 58 0 1960 133 36 0 chr10 110351171 110351472 -35237816 - AluSx SINE Alu 0 312 1 302 0 0 26 chr10 110351485 110351524 -35237764 + (TTTAA)n Simple_repeat Simple_repeat 3 40 0 936 141 31 6 chr10 110351524 110351687 -35237601 - AluJo SINE Alu -26 286 120 596 290 29 39 chr10 110351789 110351996 -35237292 + MIR3 SINE MIR 1 205 -3 1824 161 3 0 chr10 110353243 110353534 -35235754 + AluJo SINE Alu 1 292 -20 308 337 18 41 chr10 110353596 110353765 -35235523 - L1ME4a LINE L1 -95 6026 5862 1039 57 0 0 chr10 110353771 110353894 -35235394 + AluY SINE Alu 1 123 -188 1175 43 0 0 chr10 110353901 110354042 -35235246 + L1PA3 LINE L1 6015 6155 0 1510 43 5 0 chr10 110354055 110354242 -35235046 + AluY SINE Alu 119 306 -5 281 307 86 12 chr10 110354311 110354474 -35234814 - L1ME4a LINE L1 -340 5781 5607 2096 109 21 0 chr10 110354478 110354763 -35234525 + AluSx SINE Alu 4 294 -18 206 296 56 73 chr10 110354845 110355024 -35234264 + L2 LINE L2 2293 2468 -846 350 346 8 8 chr10 110355025 110355158 -35234130 - MER94 DNA DNA -1 133 1 2230 96 10 0 chr10 110355800 110356101 -35233187 - AluSx SINE Alu -8 304 1 273 206 0 44 chr10 110356801 110356869 -35232419 + GA-rich Low_complexity Low_complexity 3 67 0 1774 154 28 0 chr10 110357108 110357394 -35231894 - AluJb SINE Alu -18 294 1 247 197 61 0 chr10 110357474 110357540 -35231748 + GA-rich Low_complexity Low_complexity 5 74 0 2256 119 0 0 chr10 110358638 110358950 -35230338 - AluSx SINE Alu 0 312 1 183 316 18 0 chr10 110360251 110360308 -35228980 + MIR SINE MIR 46 103 -159 2123 122 0 0 chr10 110360308 110360633 -35228655 - AluSx SINE Alu 0 312 1 947 196 0 0 chr10 110360635 110360798 -35228490 - FRAM SINE Alu -18 158 1 1577 155 0 110 chr10 110360815 110361151 -35228137 + AluJo SINE Alu 2 300 -2 621 286 66 63 chr10 110361173 110361536 -35227752 - MLT2C2 LTR ERVL -57 407 44 * 1020 189 11 0 chr10 110361363 110361548 -35227740 - MLT1E3 LTR MaLR -385 239 53 1299 142 0 0 chr10 110361572 110361762 -35227526 + AluSx SINE Alu 38 227 -85 268 174 29 72 chr10 110361762 110361831 -35227457 + AluY SINE Alu 203 262 -39 1878 125 3 26 chr10 110362854 110363158 -35226130 - AluSq SINE Alu -16 297 1 359 236 7 57 chr10 110364431 110364571 -35224717 + GA-rich Low_complexity Low_complexity 2 134 0 588 291 21 11 chr10 110365798 110365987 -35223301 - MIR SINE MIR -28 234 44 468 284 57 0 chr10 110367263 110367404 -35221884 + MIR SINE MIR 104 252 -10 273 208 0 0 chr10 110367686 110367758 -35221530 + (TG)n Simple_repeat Simple_repeat 1 72 0 311 237 26 0 chr10 110368422 110368498 -35220790 + MIR SINE MIR 80 157 -105 1903 176 0 3 chr10 110368769 110369082 -35220206 - AluJo SINE Alu 0 312 1 457 304 54 17 chr10 110369084 110369324 -35219964 - L1MC/D LINE L1 -1986 5822 5574 218 264 11 11 chr10 110370331 110370422 -35218866 + (CA)n Simple_repeat Simple_repeat 1 91 0 290 315 22 11 chr10 110373424 110373513 -35215775 + MER5A DNA MER1_type 63 152 -37 2188 127 0 0 chr10 110374890 110375197 -35214091 + AluSx SINE Alu 1 307 -5 806 203 0 62 chr10 110375207 110375357 -35213931 + FRAM SINE Alu 1 140 -162 630 0 0 0 chr10 110375357 110375427 -35213861 + (TA)n Simple_repeat Simple_repeat 1 70 0 806 203 0 62 chr10 110375427 110375453 -35213835 + FRAM SINE Alu 140 166 0 485 261 155 43 chr10 110375461 110375668 -35213620 - MIR SINE MIR -13 249 20 311 325 114 0 chr10 110376532 110376646 -35212642 + MIR SINE MIR 64 190 -72 486 160 92 50 chr10 110377227 110377346 -35211942 + MER5B DNA MER1_type 1 124 -54 1322 143 71 91 chr10 110377364 110377672 -35211616 + AluJo SINE Alu 11 312 0 374 39 0 19 chr10 110377682 110377734 -35211554 + MER5B DNA MER1_type 128 178 0 222 384 15 23 chr10 110377819 110377952 -35211336 + MER5A DNA MER1_type 57 188 -1 295 246 119 4 chr10 110377963 110378070 -35211218 - MER5A DNA MER1_type -2 187 42 419 348 105 37 chr10 110378090 110378498 -35210790 - L2 LINE L2 -466 2848 2413 758 105 9 26 chr10 110379376 110379490 -35209798 - FLAM_A SINE Alu -9 133 22 2525 56 0 0 chr10 110380056 110380359 -35208929 - AluY SINE Alu -5 306 4 2084 116 3 3 chr10 110380362 110380656 -35208632 - AluSx SINE Alu -16 296 3 1820 162 7 10 chr10 110380821 110381130 -35208158 + AluJo SINE Alu 1 308 -4 276 289 31 78 chr10 110381221 110381349 -35207939 - MIR SINE MIR -51 211 90 340 196 9 112 chr10 110381722 110381791 -35207497 + MER5A DNA MER1_type 9 65 -124 2193 107 0 13 chr10 110381791 110382099 -35207189 + AluSg SINE Alu 1 304 -6 340 196 9 112 chr10 110382099 110382136 -35207152 + MER5A DNA MER1_type 65 104 -85 962 204 14 18 chr10 110382309 110382530 -35206758 + AluJo SINE Alu 1 220 -92 480 327 67 37 chr10 110385634 110385903 -35203385 + L2 LINE L2 2992 3268 -4 236 140 40 0 chr10 110385927 110385977 -35203311 + CT-rich Low_complexity Low_complexity 4 55 0 197 159 23 0 chr10 110386064 110386108 -35203180 + G-rich Low_complexity Low_complexity 5 49 0 256 219 34 8 chr10 110386763 110386882 -35202406 + CT-rich Low_complexity Low_complexity 1 122 0 206 118 0 29 chr10 110387962 110387996 -35201292 + (GGGGA)n Simple_repeat Simple_repeat 2 34 0 21 0 0 0 chr10 110388642 110388663 -35200625 + AT_rich Low_complexity Low_complexity 1 21 0 22 70 0 0 chr10 110388754 110388797 -35200491 + GC_rich Low_complexity Low_complexity 1 43 0 26 88 0 0 chr10 110390542 110390610 -35198678 + GC_rich Low_complexity Low_complexity 1 68 0 24 0 0 0 chr10 110390646 110390670 -35198618 + GC_rich Low_complexity Low_complexity 1 24 0 409 190 31 18 chr10 110391002 110391165 -35198123 + CT-rich Low_complexity Low_complexity 2 166 0 33 25 0 0 chr10 110392019 110392059 -35197229 + GC_rich Low_complexity Low_complexity 1 40 0 21 0 0 0 chr10 110392113 110392134 -35197154 + GC_rich Low_complexity Low_complexity 1 21 0 274 301 0 0 chr10 110392270 110392363 -35196925 + (TG)n Simple_repeat Simple_repeat 1 93 0 267 31 0 0 chr10 110393411 110393443 -35195845 + (GA)n Simple_repeat Simple_repeat 2 33 0 565 264 48 34 chr10 110395190 110395398 -35193890 - MIR SINE MIR 0 262 52 1404 159 0 0 chr10 110396700 110396920 -35192368 - AluJb SINE Alu -8 304 85 2092 121 13 0 chr10 110396942 110397249 -35192039 + AluSx SINE Alu 1 311 -1 206 62 31 0 chr10 110397254 110397286 -35192002 + (GAAAA)n Simple_repeat Simple_repeat 3 35 0 306 308 43 17 chr10 110397501 110397618 -35191670 - L2 LINE L2 -230 3042 2923 25 0 0 0 chr10 110398190 110398215 -35191073 + GC_rich Low_complexity Low_complexity 1 25 0 204 170 19 38 chr10 110399135 110399188 -35190100 + CT-rich Low_complexity Low_complexity 2 53 0 317 294 103 37 chr10 110399336 110399472 -35189816 + MIR3 SINE MIR 7 151 -57 207 0 0 0 chr10 110399621 110399644 -35189644 + (TTTTTA)n Simple_repeat Simple_repeat 2 24 0 197 260 26 52 chr10 110400846 110400923 -35188365 + MIR SINE MIR 108 182 -80 323 274 140 27 chr10 110401193 110401366 -35187922 - MIR SINE MIR -67 141 1 318 106 0 0 chr10 110401398 110401445 -35187843 + (CA)n Simple_repeat Simple_repeat 2 48 0 390 178 357 8 chr10 110401884 110402013 -35187275 - MER96 DNA MER1_type? 0 175 2 318 278 24 48 chr10 110402014 110402140 -35187148 + L3 LINE CR1 1298 1420 -157 260 294 25 88 chr10 110402417 110402577 -35186711 + L2 LINE L2 3164 3313 0 196 332 18 100 chr10 110402911 110403006 -35186282 - L2 LINE L2 -217 3055 2954 2217 115 23 0 chr10 110403006 110403310 -35185978 + AluSx SINE Alu 2 312 0 196 332 18 100 chr10 110403310 110403443 -35185845 - L2 LINE L2 -318 2954 2846 640 334 56 50 chr10 110404721 110405185 -35184103 - L2 LINE L2 0 3272 2806 214 248 165 50 chr10 110405466 110405587 -35183701 - L2 LINE L2 0 3272 3138 24 53 0 0 chr10 110405804 110405842 -35183446 + AT_rich Low_complexity Low_complexity 1 38 0 640 276 71 4 chr10 110405852 110406077 -35183211 - MIR SINE MIR -10 252 13 226 180 62 195 chr10 110406739 110406867 -35182421 - MER94 DNA DNA -23 111 1 276 77 0 0 chr10 110407150 110407189 -35182099 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 833 127 0 0 chr10 110407192 110407310 -35181978 - FLAM_C SINE Alu -25 118 1 417 315 157 43 chr10 110407334 110407701 -35181587 - L2 LINE L2 -914 2400 1946 2016 111 0 0 chr10 110407701 110407972 -35181316 - AluSx SINE Alu -4 308 38 417 315 157 43 chr10 110407972 110408166 -35181122 - L2 LINE L2 -1368 1946 1775 2089 105 0 37 chr10 110408174 110408497 -35180791 + AluJb SINE Alu 1 311 -1 242 171 0 171 chr10 110409542 110409584 -35179704 - MLT1A1 LTR MaLR -103 262 214 264 30 0 0 chr10 110409584 110409617 -35179671 + (TTTC)n Simple_repeat Simple_repeat 2 34 0 2192 88 11 0 chr10 110409627 110409912 -35179376 - AluSq SINE Alu -23 290 3 242 171 0 171 chr10 110409912 110409969 -35179319 - MLT1A1 LTR MaLR -161 204 171 1269 175 8 8 chr10 110410046 110410303 -35178985 - L1MD3 LINE L1 -10 7985 7729 941 294 53 3 chr10 110410299 110410660 -35178628 - L1ME4a LINE L1 -210 5911 5533 * 232 324 0 0 chr10 110411695 110411766 -35177522 - MER91A DNA MER1_type -3 193 123 546 264 0 88 chr10 110411869 110412085 -35177203 + L2 LINE L2 3117 3313 0 843 155 75 43 chr10 110412244 110412405 -35176883 - AluJo SINE Alu 0 302 137 1396 108 10 0 chr10 110412408 110412611 -35176677 - AluSg/x SINE Alu -4 306 102 1254 128 11 0 chr10 110412611 110412790 -35176498 - AluSx SINE Alu -131 181 1 870 160 0 0 chr10 110412790 110412921 -35176367 - AluJo SINE Alu -170 132 2 1456 203 26 40 chr10 110413194 110413256 -35176032 - MLT1A1 LTR MaLR -3 362 301 1570 174 0 36 chr10 110413256 110413599 -35175689 - AluJb SINE Alu 0 312 1 1456 203 26 40 chr10 110413599 110413697 -35175591 - MLT1A1 LTR MaLR -64 301 203 2211 125 0 0 chr10 110413697 110414008 -35175280 - AluSx SINE Alu -1 311 1 1456 203 26 40 chr10 110414008 110414195 -35175093 - MLT1A1 LTR MaLR -162 203 19 995 147 51 17 chr10 110414344 110414504 -35174784 - AluSg/x SINE Alu -10 302 134 2357 93 0 6 chr10 110414504 110414815 -35174473 - AluSx SINE Alu -3 309 1 995 147 51 17 chr10 110414815 110414831 -35174457 - AluSg/x SINE Alu -178 134 120 235 345 84 17 chr10 110416188 110416307 -35172981 + L2 LINE L2 3186 3312 -1 2254 116 0 3 chr10 110417297 110417607 -35171681 - AluSg SINE Alu -1 309 1 980 107 55 155 chr10 110419039 110419191 -35170097 + MER33 DNA MER1_type 14 125 -2460 2102 154 0 6 chr10 110419191 110419503 -35169785 - AluJo SINE Alu 0 312 3 980 107 55 155 chr10 110419503 110419641 -35169647 + MER33 DNA MER1_type 125 275 -49 431 81 0 0 chr10 110419641 110419703 -35169585 - Alu SINE Alu -13 299 238 1356 272 62 14 chr10 110419814 110420248 -35169040 - MLT1J LTR MaLR -37 474 20 431 0 37 0 chr10 110420364 110420418 -35168870 + (TTTA)n Simple_repeat Simple_repeat 2 57 0 1193 149 0 6 chr10 110420420 110420594 -35168694 - AluSg/x SINE Alu -30 282 110 1911 140 10 10 chr10 110420602 110420895 -35168393 + AluSx SINE Alu 6 298 -14 2273 99 0 0 chr10 110420897 110421229 -35168059 + AluSx SINE Alu 1 332 0 2281 125 0 0 chr10 110421229 110421541 -35167747 + AluSx SINE Alu 1 312 0 476 97 0 0 chr10 110421550 110421651 -35167637 + Alu SINE Alu 223 323 0 367 282 117 0 chr10 110422176 110422279 -35167009 + L2 LINE L2 3158 3272 0 231 224 0 15 chr10 110423805 110423872 -35165416 - L1MA7 LINE L1 0 6291 6226 441 198 0 0 chr10 110424994 110425085 -35164203 + (TG)n Simple_repeat Simple_repeat 2 92 0 187 268 173 55 chr10 110425531 110425658 -35163630 + MIR3 SINE MIR 5 146 -62 * 222 239 18 88 chr10 110425631 110425744 -35163544 + MIR SINE MIR 118 222 -40 2301 117 0 3 chr10 110425748 110426055 -35163233 + AluSx SINE Alu 1 306 -6 2127 116 0 70 chr10 110427243 110427435 -35161853 - AluSp SINE Alu -7 306 145 318 106 0 0 chr10 110427435 110427482 -35161806 + (TA)n Simple_repeat Simple_repeat 2 48 0 2127 116 0 70 chr10 110427482 110427618 -35161670 - AluSp SINE Alu -168 145 1 2527 68 10 3 chr10 110427627 110427936 -35161352 - AluY SINE Alu 0 311 1 261 0 0 0 chr10 110427936 110427965 -35161323 + (T)n Simple_repeat Simple_repeat 1 29 0 366 246 82 0 chr10 110427969 110428103 -35161185 + L1ME4a LINE L1 5973 6117 -4 393 22 0 0 chr10 110428778 110428824 -35160464 + (CA)n Simple_repeat Simple_repeat 1 46 0 228 289 94 50 chr10 110429296 110429497 -35159791 + L3 LINE CR1 1289 1498 -79 571 234 0 0 chr10 110429501 110429625 -35159663 - MER113 DNA MER1_type? -6 515 392 2006 153 16 0 chr10 110429732 110430039 -35159249 - AluSx SINE Alu 0 312 1 294 256 44 106 chr10 110430271 110430465 -35158823 - L1MB4 LINE L1 -215 5949 5745 2599 107 58 43 chr10 110430465 110430551 -35158737 + L1MB4 LINE L1 5688 5771 -412 1888 166 3 13 chr10 110430551 110430852 -35158436 + AluJb SINE Alu 1 298 -14 2599 107 58 43 chr10 110430852 110431198 -35158090 + L1MB3 LINE L1 5771 6130 -53 2064 110 7 3 chr10 110431198 110431489 -35157799 + AluSx SINE Alu 1 292 -20 2599 107 58 43 chr10 110431489 110431541 -35157747 + L1MB3 LINE L1 6130 6180 -3 294 256 44 106 chr10 110431541 110431573 -35157715 - L1MB4 LINE L1 -419 5745 5737 1352 218 33 41 chr10 110431573 110431967 -35157321 - MER113 DNA MER1_type? -127 394 4 217 333 197 11 chr10 110432096 110432279 -35157009 - L2 LINE L2 -220 3052 2836 630 148 139 0 chr10 110432286 110432401 -35156887 + FLAM_C SINE Alu 3 133 0 232 294 34 42 chr10 110432429 110432548 -35156740 - L2 LINE L2 -527 2787 2670 482 277 71 118 chr10 110432581 110432946 -35156342 - L2 LINE L2 -1 3271 2924 1967 137 11 7 chr10 110433147 110433432 -35155856 - AluJo SINE Alu -26 286 1 23 0 0 0 chr10 110433442 110433465 -35155823 + AT_rich Low_complexity Low_complexity 1 23 0 2360 82 14 0 chr10 110433468 110433760 -35155528 + AluSc SINE Alu 1 296 -13 187 205 0 0 chr10 110434191 110434230 -35155058 - L2 LINE L2 -1155 2159 2121 2792 36 0 0 chr10 110434737 110435046 -35154242 - AluY SINE Alu -2 309 1 224 237 129 11 chr10 110435527 110435620 -35153668 - L2 LINE L2 -2 3311 3208 302 189 323 18 chr10 110436454 110436618 -35152670 + MIR SINE MIR 49 262 0 1704 133 31 0 chr10 110436633 110436719 -35152569 + AluJb SINE Alu 36 118 -194 273 29 0 0 chr10 110436719 110436753 -35152535 + (TAA)n Simple_repeat Simple_repeat 2 35 0 2102 133 3 3 chr10 110436753 110437047 -35152241 + AluSq SINE Alu 1 294 -19 1704 133 31 0 chr10 110437047 110437214 -35152074 + AluJb SINE Alu 117 298 -14 2240 110 3 0 chr10 110437214 110437504 -35151784 + AluSq SINE Alu 1 291 -22 659 288 68 5 chr10 110437819 110438024 -35151264 - MIR SINE MIR 0 262 45 208 301 0 27 chr10 110438127 110438200 -35151088 - L2 LINE L2 -5 3308 3238 498 209 38 38 chr10 110438979 110439031 -35150257 - L1ME3 LINE L1 0 6162 6111 2292 120 0 0 chr10 110439031 110439323 -35149965 - AluSx SINE Alu -20 292 1 498 209 38 38 chr10 110439323 110439428 -35149860 - L1ME3 LINE L1 -50 6112 6005 1317 198 101 0 chr10 110439478 110439735 -35149553 - AluJb SINE Alu -15 297 15 2466 80 3 10 chr10 110439797 110440109 -35149179 - AluY SINE Alu -1 310 1 1611 238 31 49 chr10 110440113 110440164 -35149124 - L1ME3A LINE L1 -179 5983 5933 1960 163 0 0 chr10 110440164 110440452 -35148836 + AluSx SINE Alu 1 288 -24 1955 143 0 48 chr10 110440460 110440775 -35148513 - AluJb SINE Alu -2 310 11 1611 238 31 49 chr10 110440775 110441221 -35148067 - L1ME3A LINE L1 -236 5926 5474 2185 133 10 0 chr10 110441221 110441523 -35147765 - AluSx SINE Alu -7 305 1 1995 124 3 24 chr10 110441527 110441843 -35147445 - AluSx SINE Alu 0 312 5 1611 238 31 49 chr10 110441843 110441857 -35147431 - L1ME3A LINE L1 -691 5471 5490 2434 94 3 0 chr10 110441857 110442155 -35147133 - AluSp SINE Alu -14 299 1 1611 238 31 49 chr10 110442155 110442197 -35147091 - L1ME3A LINE L1 -671 5491 5450 233 303 168 5 chr10 110442219 110442404 -35146884 - MIR SINE MIR 0 262 48 461 137 0 0 chr10 110442607 110442680 -35146608 + U3 snRNA snRNA 1 73 -144 26 50 0 0 chr10 110442680 110442720 -35146568 + AT_rich Low_complexity Low_complexity 1 40 0 689 101 0 9 chr10 110442765 110442874 -35146414 + (GGAA)n Simple_repeat Simple_repeat 1 108 0 2085 127 0 0 chr10 110442881 110443189 -35146099 - AluSx SINE Alu 0 308 1 278 130 0 0 chr10 110443210 110443256 -35146032 + MIR SINE MIR 114 159 -103 523 278 0 26 chr10 110443339 110443490 -35145798 - MER5B DNA MER1_type -31 147 1 201 307 22 39 chr10 110445143 110445322 -35143966 + (CATATA)n Simple_repeat Simple_repeat 5 180 0 414 0 0 0 chr10 110445432 110445478 -35143810 + (CA)n Simple_repeat Simple_repeat 1 46 0 330 284 8 39 chr10 110445717 110445844 -35143444 + G-rich Low_complexity Low_complexity 2 124 0 263 234 0 53 chr10 110447623 110447717 -35141571 + C-rich Low_complexity Low_complexity 5 93 0 608 238 12 25 chr10 110448428 110448588 -35140700 - MIR SINE MIR 0 262 105 * 696 236 11 109 chr10 110448582 110448654 -35140634 - MIR SINE MIR -5 257 179 2492 84 3 0 chr10 110448654 110448963 -35140325 - AluSp SINE Alu -2 311 2 696 236 11 109 chr10 110448963 110449174 -35140114 - MIR SINE MIR -83 179 2 442 250 244 0 chr10 110450699 110450871 -35138417 - MIR SINE MIR -6 256 43 180 0 0 0 chr10 110450903 110450923 -35138365 + (A)n Simple_repeat Simple_repeat 1 20 0 181 204 37 19 chr10 110452838 110452892 -35136396 - MER5B DNA MER1_type -123 55 1 454 327 0 13 chr10 110453626 110453785 -35135503 + C-rich Low_complexity Low_complexity 4 160 0 202 208 21 0 chr10 110454319 110454367 -35134921 + (CG)n Simple_repeat Simple_repeat 1 49 0 246 211 0 42 chr10 110454698 110454769 -35134519 + CT-rich Low_complexity Low_complexity 1 68 0 239 208 0 0 chr10 110454812 110454860 -35134428 - L2 LINE L2 -2 3311 3264 290 204 46 28 chr10 110454866 110454974 -35134314 + CT-rich Low_complexity Low_complexity 6 115 0 2437 103 3 0 chr10 110455482 110455794 -35133494 - AluSp SINE Alu 0 313 1 641 114 0 9 chr10 110455933 110456038 -35133250 - FLAM_C SINE Alu 0 143 40 2302 107 0 16 chr10 110456505 110456814 -35132474 + AluSx SINE Alu 1 304 -8 1423 193 58 52 chr10 110457614 110457905 -35131383 + MLT1A1 LTR MaLR 1 289 -76 249 33 0 0 chr10 110457905 110457935 -35131353 + (TTA)n Simple_repeat Simple_repeat 3 32 0 1774 176 0 7 chr10 110457935 110458214 -35131074 - AluJb SINE Alu -35 277 1 1423 193 58 52 chr10 110458214 110458284 -35131004 + MLT1A1 LTR MaLR 288 365 0 2335 83 31 0 chr10 110458292 110458582 -35130706 + AluY SINE Alu 1 299 -12 416 206 149 9 chr10 110459147 110459254 -35130034 + MIR3 SINE MIR 81 202 -6 195 100 0 0 chr10 110461095 110461125 -35128163 + (TG)n Simple_repeat Simple_repeat 1 30 0 1738 182 0 29 chr10 110461715 110462028 -35127260 - AluJo SINE Alu -3 309 6 2396 98 7 0 chr10 110462123 110462429 -35126859 - AluSx SINE Alu -4 308 1 2320 178 42 26 chr10 110462429 110462884 -35126404 + MLT2B1 LTR ERVL 1 462 -58 191 88 29 0 chr10 110462893 110462927 -35126361 + (TTCC)n Simple_repeat Simple_repeat 3 37 0 302 322 105 12 chr10 110462930 110463101 -35126187 - HAL1 LINE L1 -1218 1289 1103 263 102 0 41 chr10 110463102 110463151 -35126137 + (TTTC)n Simple_repeat Simple_repeat 4 50 0 243 204 0 0 chr10 110463151 110463205 -35126083 + MLT2B1 LTR ERVL 501 554 0 253 312 43 0 chr10 110464521 110464614 -35124674 - MIR3 SINE MIR -3 205 109 209 242 0 45 chr10 110465192 110465258 -35124030 + CT-rich Low_complexity Low_complexity 2 64 0 1146 121 0 6 chr10 110465790 110465947 -35123341 - AluJb SINE Alu -23 289 134 1340 112 11 5 chr10 110469239 110469426 -35119862 + U2 snRNA snRNA 1 188 0 517 331 17 0 chr10 110470898 110471083 -35118205 - MIR SINE MIR -14 248 62 1099 111 76 0 chr10 110471160 110471332 -35117956 + MER53 DNA DNA 1 185 -4 1841 89 125 18 chr10 110471708 110471988 -35117300 + AluSg SINE Alu 1 310 0 353 302 0 62 chr10 110472670 110472849 -35116439 + CT-rich Low_complexity Low_complexity 4 171 0 615 260 135 10 chr10 110473537 110473729 -35115559 + MIR SINE MIR 47 262 0 928 264 54 0 chr10 110473771 110474010 -35115278 + MIR SINE MIR 1 252 -10 2205 121 0 0 chr10 110474697 110474995 -35114293 - AluSx SINE Alu -14 298 1 654 285 70 132 chr10 110475103 110475653 -35113635 - L2 LINE L2 -84 3188 2606 1986 115 0 4 chr10 110475653 110475914 -35113374 - AluSq SINE Alu -53 260 1 2443 85 0 0 chr10 110475914 110476209 -35113079 - AluSx SINE Alu -17 295 1 654 285 70 132 chr10 110476209 110476329 -35112959 - L2 LINE L2 -665 2607 2481 2458 75 0 0 chr10 110476329 110476622 -35112666 - AluY SINE Alu -8 303 11 654 285 70 132 chr10 110476622 110476941 -35112347 - L2 LINE L2 -791 2481 2144 2516 89 0 13 chr10 110476941 110477257 -35112031 + AluSx SINE Alu 1 312 0 654 285 70 132 chr10 110477257 110477404 -35111884 - L2 LINE L2 -1128 2144 1989 533 238 95 60 chr10 110477404 110477466 -35111822 + MER5B DNA MER1_type 2 60 -118 2484 69 0 7 chr10 110477466 110477770 -35111518 + AluY SINE Alu 1 302 -9 533 238 95 60 chr10 110477770 110477875 -35111413 + MER5B DNA MER1_type 60 175 -3 654 285 70 132 chr10 110477875 110477889 -35111399 - L2 LINE L2 -1283 1989 2127 1873 148 3 58 chr10 110477889 110478219 -35111069 + AluSx SINE Alu 1 312 0 654 285 70 132 chr10 110478219 110478376 -35110912 - L2 LINE L2 -1144 2128 1963 615 262 107 0 chr10 110478416 110478584 -35110704 - MIR SINE MIR -54 208 23 314 109 36 0 chr10 110478663 110478718 -35110570 + CT-rich Low_complexity Low_complexity 2 58 0 * 739 92 0 17 chr10 110478708 110478828 -35110460 + (TTCC)n Simple_repeat Simple_repeat 4 121 0 675 196 58 58 chr10 110479178 110479351 -35109937 + MER5B DNA MER1_type 1 173 -5 445 257 7 63 chr10 110479364 110479534 -35109754 + MIR SINE MIR 21 180 -63 345 24 0 0 chr10 110479802 110479844 -35109444 + (TG)n Simple_repeat Simple_repeat 2 43 0 2373 104 0 13 chr10 110480398 110480714 -35108574 + AluSx SINE Alu 1 312 0 362 318 64 0 chr10 110480988 110481098 -35108190 + L2 LINE L2 3154 3270 -2 1114 245 78 6 chr10 110482179 110482510 -35106778 - LTR16A LTR ERVL -5 445 91 321 300 23 12 chr10 110482581 110482676 -35106612 - MIR SINE MIR -61 147 58 387 0 0 0 chr10 110483456 110483499 -35105789 + (TG)n Simple_repeat Simple_repeat 1 43 0 2410 87 13 0 chr10 110483635 110483944 -35105344 - AluSp SINE Alu 0 313 1 771 309 81 64 chr10 110485189 110486004 -35103284 + L2 LINE L2 2444 3262 -10 2210 78 0 11 chr10 110486006 110486316 -35102972 + AluY SINE Alu 1 307 0 456 150 0 0 chr10 110486407 110486487 -35102801 + (TTCC)n Simple_repeat Simple_repeat 3 82 0 563 224 30 15 chr10 110486489 110486623 -35102665 - L2 LINE L2 -1 3271 3136 426 201 214 63 chr10 110486844 110487003 -35102285 - MIR SINE MIR -10 252 70 219 283 0 0 chr10 110486989 110487035 -35102253 + L2 LINE L2 3268 3313 0 * 281 266 0 16 chr10 110487043 110487107 -35102181 - MIR SINE MIR -180 82 20 216 195 0 0 chr10 110487897 110487938 -35101350 + MIR SINE MIR 220 260 -2 2853 73 3 3 chr10 110488359 110488714 -35100574 + THE1A LTR MaLR 1 355 0 12111 95 6 0 chr10 110488714 110490284 -35099004 + THE1A-int LTR MaLR 1 1580 0 2838 68 8 3 chr10 110490284 110490637 -35098651 + THE1A LTR MaLR 1 355 0 333 0 0 0 chr10 110493004 110493034 -35096254 + (TG)n Simple_repeat Simple_repeat 1 30 -59 186 43 0 0 chr10 110493034 110493057 -35096231 + (TC)n Simple_repeat Simple_repeat 2 24 0 * 333 0 0 0 chr10 110493056 110493093 -35096195 + (TG)n Simple_repeat Simple_repeat 2 38 0 333 0 0 0 chr10 110493057 110493093 -35096195 + (TG)n Simple_repeat Simple_repeat 29 89 0 2401 80 3 0 chr10 110495120 110495409 -35093879 + AluY SINE Alu 1 290 -21 1998 137 0 3 chr10 110495638 110495923 -35093365 - AluJb SINE Alu 0 312 29 1828 161 23 13 chr10 110495934 110496108 -35093180 - AluSx SINE Alu -5 307 127 2363 108 3 0 chr10 110496108 110496413 -35092875 - AluSx SINE Alu -6 306 1 1828 161 23 13 chr10 110496413 110496542 -35092746 - AluSx SINE Alu -185 127 1 2101 147 7 0 chr10 110497352 110497658 -35091630 + AluJb SINE Alu 1 308 -4 1469 138 160 33 chr10 110497999 110498274 -35091014 - AluJo SINE Alu -2 310 1 362 179 21 63 chr10 110498350 110498445 -35090843 - MIR SINE MIR 0 262 172 1881 92 0 75 chr10 110498507 110498788 -35090500 - AluSx SINE Alu -52 260 1 2015 128 26 0 chr10 110498794 110499098 -35090190 - AluSq SINE Alu -1 312 1 2450 89 0 6 chr10 110499152 110499466 -35089822 - AluSx SINE Alu 0 312 1 346 219 42 21 chr10 110499489 110499585 -35089703 - L1ME3A LINE L1 -8 6162 6065 21 0 0 0 chr10 110499933 110499954 -35089334 + AT_rich Low_complexity Low_complexity 1 21 0 939 123 0 29 chr10 110499958 110500096 -35089192 - AluJb SINE Alu -178 134 1 760 168 0 0 chr10 110500432 110500539 -35088749 + FLAM_A SINE Alu 2 108 -34 944 102 0 0 chr10 110500541 110500659 -35088629 - AluSg/x SINE Alu -14 298 181 1962 111 0 39 chr10 110500659 110500939 -35088349 - AluSq SINE Alu -44 269 1 2295 90 7 0 chr10 110501137 110501426 -35087862 - AluSg SINE Alu -19 291 1 249 108 0 0 chr10 110501491 110501528 -35087760 + (CAT)n Simple_repeat Simple_repeat 3 39 0 198 352 0 0 chr10 110501531 110501602 -35087686 - MIR SINE MIR -2 260 190 541 243 6 50 chr10 110501936 110502117 -35087171 + L1MC5 LINE L1 7734 7906 -55 2122 121 10 0 chr10 110502148 110502455 -35086833 + AluJb SINE Alu 1 310 -2 423 0 0 0 chr10 110502494 110502541 -35086747 + (TG)n Simple_repeat Simple_repeat 2 48 0 1921 106 60 28 chr10 110502623 110502905 -35086383 + AluSx SINE Alu 7 297 -15 663 191 0 0 chr10 110502926 110503036 -35086252 + FLAM_A SINE Alu 32 141 -1 25 0 0 0 chr10 110503066 110503091 -35086197 + AT_rich Low_complexity Low_complexity 1 25 0 1603 257 88 4 chr10 110503614 110504093 -35085195 + LTR33 LTR ERVL 3 521 0 183 232 54 18 chr10 110504126 110504182 -35085106 + L2 LINE L2 3161 3218 -95 1699 223 75 15 chr10 110504749 110505161 -35084127 + MLT1F LTR MaLR 106 542 0 1356 211 65 25 chr10 110505162 110505198 -35084090 + L1MC4 LINE L1 7474 7507 -535 2274 118 0 0 chr10 110505198 110505502 -35083786 + AluSq SINE Alu 1 304 -9 1356 211 65 25 chr10 110505502 110505821 -35083467 + L1MC4 LINE L1 7507 7843 -199 1939 72 59 52 chr10 110505821 110506111 -35083177 + AluY SINE Alu 1 292 -19 2463 46 0 0 chr10 110506112 110506418 -35082870 + AluY SINE Alu 1 306 0 2291 76 10 0 chr10 110506448 110506737 -35082551 - AluSp SINE Alu -21 292 1 1907 136 13 31 chr10 110506851 110507168 -35082120 - AluJo SINE Alu -1 311 1 2232 114 27 0 chr10 110507171 110507470 -35081818 - AluSq SINE Alu -6 307 1 687 247 201 5 chr10 110507831 110508050 -35081238 - MIR SINE MIR 0 262 1 1471 158 0 14 chr10 110508200 110508421 -35080867 - MER20 DNA MER1_type 0 219 2 2417 90 0 0 chr10 110508453 110508754 -35080534 - AluSq SINE Alu -12 301 1 940 138 61 28 chr10 110508756 110508937 -35080351 + L1MA7 LINE L1 5607 5793 -498 242 51 51 0 chr10 110508940 110508979 -35080309 + (CATATA)n Simple_repeat Simple_repeat 2 42 0 2368 101 0 0 chr10 110508981 110509287 -35080001 - AluY SINE Alu -5 306 1 2186 72 18 14 chr10 110509288 110509460 -35079828 - AluSc SINE Alu -7 302 127 2601 30 0 10 chr10 110509460 110509765 -35079523 - AluY SINE Alu -9 302 1 2186 72 18 14 chr10 110509765 110509870 -35079418 - AluSc SINE Alu -182 127 24 413 68 0 0 chr10 110509882 110509941 -35079347 + L1MA7 LINE L1 5774 5832 -459 1144 161 18 0 chr10 110509947 110510164 -35079124 + L1MA7 LINE L1 6069 6289 -2 2066 114 17 17 chr10 110510323 110510621 -35078667 + AluSg SINE Alu 1 298 -12 345 263 79 26 chr10 110510702 110510854 -35078434 + L2 LINE L2 1537 1696 -1618 819 179 36 140 chr10 110510869 110510950 -35078338 - L1MC4 LINE L1 -5 8037 7949 2135 142 0 3 chr10 110510950 110511252 -35078036 - AluSx SINE Alu -11 301 1 819 179 36 140 chr10 110511252 110511556 -35077732 - L1MC4 LINE L1 -93 7949 7692 22 0 0 0 chr10 110511556 110511578 -35077710 + AT_rich Low_complexity Low_complexity 1 22 0 1093 91 0 0 chr10 110511590 110511722 -35077566 + AluSq/x SINE Alu 5 136 -177 2372 93 0 0 chr10 110511722 110512024 -35077264 + AluY SINE Alu 1 302 -9 439 196 113 0 chr10 110512024 110512121 -35077167 - AluJo/FLAM SINE Alu -203 109 2 299 220 46 0 chr10 110512181 110512267 -35077021 - L1MC4 LINE L1 -227 7768 7587 191 329 81 37 chr10 110512271 110512432 -35076856 + L2 LINE L2 1700 1867 -1447 1128 291 64 86 chr10 110512435 110512608 -35076680 + L2 LINE L2 2018 2193 -1121 2215 133 3 0 chr10 110512608 110512917 -35076371 - AluSx SINE Alu -2 310 1 1128 291 64 86 chr10 110512917 110513545 -35075743 + L2 LINE L2 2193 2801 -513 198 118 0 0 chr10 110513813 110513847 -35075441 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 227 293 71 30 chr10 110513881 110513980 -35075308 - L3 LINE CR1 -658 919 817 187 350 0 50 chr10 110513977 110514057 -35075231 - L2 LINE L2 -19 3253 3178 * 292 204 19 0 chr10 110514062 110514116 -35075172 + L2 LINE L2 3156 3210 -62 563 85 106 0 chr10 110514150 110514244 -35075044 - L1PB3 LINE L1 -2 6152 6049 2367 86 0 3 chr10 110514426 110514728 -35074560 - AluSx SINE Alu -11 301 1 180 0 0 0 chr10 110514739 110514759 -35074529 + (TTG)n Simple_repeat Simple_repeat 2 21 0 393 163 0 87 chr10 110514765 110514857 -35074431 - L1ME LINE L1 -347 5819 5736 316 155 17 0 chr10 110514858 110514916 -35074372 - MLT1E3 LTR MaLR 0 624 566 2017 83 65 4 chr10 110517732 110518008 -35071280 - AluSc SINE Alu -15 294 2 2502 57 7 0 chr10 110518560 110518861 -35070427 + AluY SINE Alu 1 303 -8 2532 70 0 3 chr10 110518871 110519172 -35070116 + AluSc SINE Alu 1 300 -9 1350 176 57 34 chr10 110519817 110520113 -35069175 - AluJo SINE Alu -9 303 1 225 167 121 0 chr10 110520263 110520329 -35068959 - MLT1G1 LTR MaLR -15 580 507 384 280 109 21 chr10 110520356 110520602 -35068686 - MLT1G1 LTR MaLR -254 341 33 1170 122 0 39 chr10 110521134 110521305 -35067983 - AluSg/x SINE Alu -12 298 133 2185 125 3 0 chr10 110521305 110521610 -35067678 - AluSp SINE Alu -7 306 1 2037 137 0 0 chr10 110521781 110522065 -35067223 - AluSx SINE Alu -28 284 1 2263 107 10 0 chr10 110522081 110522381 -35066907 - AluSx SINE Alu -9 303 1 535 195 8 57 chr10 110522383 110522506 -35066782 - FLAM_A SINE Alu -16 117 1 1524 138 4 4 chr10 110522585 110522816 -35066472 - AluJo SINE Alu -81 231 1 2242 109 0 0 chr10 110522823 110523116 -35066172 - AluY SINE Alu -18 293 1 2122 122 7 0 chr10 110523671 110523967 -35065321 - AluSc SINE Alu -11 298 1 2453 64 3 0 chr10 110524110 110524405 -35064883 - AluSp SINE Alu -17 296 1 951 219 110 31 chr10 110524461 110524780 -35064508 - MER2 DNA MER2_type 0 345 2 890 203 44 53 chr10 110524784 110525011 -35064277 - MIR SINE MIR -15 247 23 1482 107 0 5 chr10 110525160 110525365 -35063923 - AluSg/x SINE Alu -3 307 104 225 200 18 0 chr10 110526395 110526450 -35062838 + L1ME4a LINE L1 5985 6040 -81 1616 38 0 0 chr10 110526560 110526746 -35062542 - U2 snRNA snRNA -2 186 1 2360 98 3 0 chr10 110526777 110527083 -35062205 - AluSp SINE Alu -6 307 1 257 113 0 38 chr10 110527084 110527137 -35062151 - Alu SINE Alu -1 301 251 2213 128 0 3 chr10 110527176 110527482 -35061806 - AluSq SINE Alu -3 310 6 1006 102 0 13 chr10 110528477 110528792 -35060496 + (TA)n Simple_repeat Simple_repeat 1 311 0 2098 86 3 17 chr10 110528792 110529082 -35060206 - AluSc SINE Alu -23 286 1 1664 219 44 55 chr10 110529140 110529715 -35059573 - L1ME3A LINE L1 -8 6162 5598 2482 160 19 16 chr10 110529715 110530146 -35059142 + MSTB1 LTR MaLR 1 432 0 1664 219 44 55 chr10 110530146 110530175 -35059113 - L1ME3A LINE L1 -572 5598 5570 1188 167 0 5 chr10 110530178 110530370 -35058918 - AluJo SINE Alu 0 312 122 1964 147 0 0 chr10 110530447 110530732 -35058556 + AluSx SINE Alu 1 285 -27 340 258 57 13 chr10 110530751 110530910 -35058378 - L1ME3A LINE L1 -679 5483 5318 679 171 41 34 chr10 110530930 110531076 -35058212 - FRAM SINE Alu -17 159 13 1629 204 150 21 chr10 110531100 110531580 -35057708 - L1MC4 LINE L1 -1030 7012 6471 1938 119 27 14 chr10 110531830 110532124 -35057164 - AluJb SINE Alu -14 298 1 225 94 0 0 chr10 110532312 110532344 -35056944 + (TCCC)n Simple_repeat Simple_repeat 1 32 0 1302 153 4 46 chr10 110532349 110532590 -35056698 - AluJb SINE Alu -81 231 1 207 204 0 0 chr10 110532614 110532663 -35056625 + (CATA)n Simple_repeat Simple_repeat 4 52 0 2081 161 92 13 chr10 110532678 110532875 -35056413 - L1MB2 LINE L1 -2 6169 5989 2073 90 39 39 chr10 110532875 110533187 -35056101 - AluSx SINE Alu 0 312 1 2081 161 92 13 chr10 110533187 110533456 -35055832 - L1MB2 LINE L1 -182 5989 5666 1129 211 86 95 chr10 110533458 110533562 -35055726 - L1MB2 LINE L1 -1109 5037 4934 545 168 30 0 chr10 110533562 110533663 -35055625 - U13 snRNA snRNA 0 104 1 1129 211 86 95 chr10 110533663 110533957 -35055331 - L1MB2 LINE L1 -1212 4934 4639 2377 88 7 3 chr10 110533957 110534264 -35055024 - AluSg SINE Alu -2 308 1 1129 211 86 95 chr10 110534264 110534293 -35054995 - L1MB2 LINE L1 -1507 4639 4611 2164 89 24 0 chr10 110534293 110534586 -35054702 + AluSx SINE Alu 1 300 -12 1129 211 86 95 chr10 110534586 110534787 -35054501 - L1MB2 LINE L1 -1535 4611 4413 212 330 122 15 chr10 110534994 110535191 -35054097 - L2 LINE L2 -641 2673 2456 2442 75 0 22 chr10 110535346 110535664 -35053624 + AluY SINE Alu 1 311 0 2088 31 4 0 chr10 110535800 110536061 -35053227 - L1P1 LINE L1 -528 5627 5366 4043 17 0 0 chr10 110536061 110536506 -35052782 + L1PA2 LINE L1 5692 6155 0 2247 114 71 57 chr10 110536798 110537220 -35052068 + MSTA LTR MaLR 1 428 0 283 354 44 39 chr10 110537424 110537605 -35051683 - MER5A DNA MER1_type -1 188 7 1988 131 3 0 chr10 110537754 110538037 -35051251 + AluSx SINE Alu 1 284 -28 2355 203 109 23 chr10 110538650 110539335 -35049953 - L1ME1 LINE L1 -17 6149 5406 2264 101 27 0 chr10 110540231 110540527 -35048761 - AluSx SINE Alu -8 304 1 482 246 36 45 chr10 110541846 110542008 -35047280 + MIR SINE MIR 45 208 -54 21 0 0 0 chr10 110542086 110542107 -35047181 + AT_rich Low_complexity Low_complexity 1 21 0 469 158 0 0 chr10 110542193 110542275 -35047013 - SVA Other Other -783 603 522 323 270 34 112 chr10 110542415 110542480 -35046808 + MIR SINE MIR 7 75 -187 1378 189 104 9 chr10 110542480 110542798 -35046490 - MER7A DNA MER2_type 0 346 1 323 270 34 112 chr10 110542798 110542850 -35046438 + MIR SINE MIR 75 129 -133 868 237 47 20 chr10 110542850 110543103 -35046185 - MIR SINE MIR 0 262 3 323 270 34 112 chr10 110543103 110543217 -35046071 + MIR SINE MIR 129 221 -41 1735 230 106 49 chr10 110543379 110543681 -35045607 - L1MC4 LINE L1 -28 8014 7731 2500 87 0 0 chr10 110543681 110543993 -35045295 - AluSx SINE Alu 0 312 1 1735 230 106 49 chr10 110543993 110544466 -35044822 - L1MC4 LINE L1 -311 7731 7164 1446 127 38 0 chr10 110544768 110544981 -35044307 - AluJb SINE Alu -6 306 86 500 194 58 0 chr10 110544981 110545084 -35044204 - MER5A DNA MER1_type -80 109 1 282 116 0 0 chr10 110545208 110545251 -35044037 + (TTTC)n Simple_repeat Simple_repeat 2 44 0 569 263 0 0 chr10 110545251 110545369 -35043919 - FRAM SINE Alu -53 123 6 680 165 0 41 chr10 110545580 110545724 -35043564 - FLAM_A SINE Alu 0 142 4 845 143 0 8 chr10 110546651 110546784 -35042504 + FLAM_C SINE Alu 1 132 -11 1673 137 26 26 chr10 110546801 110547107 -35042181 + AluY SINE Alu 6 311 0 255 203 0 0 chr10 110547275 110547344 -35041944 + T-rich Low_complexity Low_complexity 1 69 0 240 191 21 0 chr10 110547481 110547528 -35041760 - Charlie4 DNA MER1_type -1910 51 4 21 0 0 0 chr10 110547590 110547611 -35041677 + AT_rich Low_complexity Low_complexity 1 21 0 266 318 79 40 chr10 110548325 110548451 -35040837 - MIR SINE MIR -58 150 20 661 298 48 6 chr10 110548527 110548879 -35040409 - L1M4 LINE L1 -1033 5113 4747 22 35 0 0 chr10 110548898 110548927 -35040361 + AT_rich Low_complexity Low_complexity 1 29 0 1135 120 78 0 chr10 110548927 110549144 -35040144 - L1MA5A LINE L1 -17 6280 6047 1221 130 11 0 chr10 110549239 110549404 -35039884 - AluSg/x SINE Alu -12 300 131 2333 91 0 0 chr10 110549404 110549700 -35039588 - AluSx SINE Alu -16 296 1 1221 130 11 0 chr10 110549700 110549718 -35039570 - AluSg/x SINE Alu -181 131 115 1498 184 46 3 chr10 110549873 110550041 -35039247 - AluJo SINE Alu -12 300 114 298 0 48 0 chr10 110550041 110550083 -35039205 + (TTTTA)n Simple_repeat Simple_repeat 2 45 0 1498 184 46 3 chr10 110550083 110550197 -35039091 - AluJo SINE Alu -198 114 6 1860 158 0 3 chr10 110550216 110550501 -35038787 - AluJb SINE Alu -28 284 1 1083 310 149 48 chr10 110550606 110551321 -35037967 + L2 LINE L2 2116 3060 -253 1911 149 3 20 chr10 110551321 110551623 -35037665 - AluJo SINE Alu -3 309 13 1083 310 149 48 chr10 110551623 110551892 -35037396 + L2 LINE L2 3060 3300 -13 2330 77 17 0 chr10 110552045 110552342 -35036946 - AluY SINE Alu -9 302 1 213 39 0 0 chr10 110552473 110552499 -35036789 + (GAAA)n Simple_repeat Simple_repeat 3 28 0 339 189 14 14 chr10 110605079 110605153 -34984135 + AluJ/FLAM SINE Alu 2 75 -227 390 50 0 33 chr10 110606473 110606533 -34982755 + (TG)n Simple_repeat Simple_repeat 1 58 0 2171 113 0 10 chr10 110611008 110611308 -34977980 + AluSx SINE Alu 3 299 -13 2195 110 7 13 chr10 110612532 110612832 -34976456 + AluSq SINE Alu 1 298 -15 292 174 0 0 chr10 110613225 110613271 -34976017 - Alu SINE Alu -19 283 238 4100 201 120 84 chr10 110613273 110614458 -34974830 - L1ME1 LINE L1 -320 5915 4774 624 215 0 0 chr10 110614458 110614565 -34974723 - FLAM_C SINE Alu -25 118 12 4100 201 120 84 chr10 110614565 110615038 -34974250 - L1ME1 LINE L1 -1461 4774 4320 2427 72 0 7 chr10 110615038 110615343 -34973945 - AluY SINE Alu -8 303 1 4100 201 120 84 chr10 110615343 110616206 -34973082 - L1ME1 LINE L1 -1915 4320 3037 2708 220 62 73 chr10 110616205 110616371 -34972917 - L1ME1 LINE L1 -3496 2719 2553 * 1597 152 61 11 chr10 110616371 110616648 -34972640 - AluJb SINE Alu -21 291 1 2098 98 0 25 chr10 110616658 110616975 -34972313 - AluSq SINE Alu -4 309 1 2708 220 62 73 chr10 110616975 110617711 -34971577 - L1ME1 LINE L1 -3671 2544 1801 2037 84 0 27 chr10 110617711 110618008 -34971280 - AluY SINE Alu -13 298 10 2708 220 62 73 chr10 110618008 110618218 -34971070 - L1ME1 LINE L1 -4414 1801 1590 1462 181 20 33 chr10 110618218 110618521 -34970767 - AluJo SINE Alu -13 299 1 2708 220 62 73 chr10 110618521 110618587 -34970701 - L1ME1 LINE L1 -4625 1590 1525 1533 159 37 14 chr10 110618587 110618883 -34970405 + AluJo SINE Alu 1 303 -9 2708 220 62 73 chr10 110618883 110619093 -34970195 - L1ME1 LINE L1 -4690 1525 1366 376 276 8 15 chr10 110619084 110619218 -34970070 + L1ME3 LINE L1 2277 2409 -3987 * 2222 136 46 14 chr10 110619220 110619587 -34969701 + MLT1B LTR MaLR 1 379 -11 3412 231 38 35 chr10 110619595 110620235 -34969053 + L1ME3 LINE L1 2366 3012 -3203 401 82 0 0 chr10 110620235 110620296 -34968992 - L1MA2 LINE L1 0 6304 6244 3412 231 38 35 chr10 110620296 110620657 -34968631 + L1ME3 LINE L1 3012 3370 -2845 643 253 45 10 chr10 110620692 110620894 -34968394 + L1ME3 LINE L1 3569 3777 -2438 655 183 17 0 chr10 110620896 110621011 -34968277 + Tigger5 DNA MER2_type 2207 2323 0 657 122 44 0 chr10 110621033 110621123 -34968165 + AluSp/q SINE Alu 198 291 -22 226 53 0 0 chr10 110621151 110621189 -34968099 - Alu SINE Alu 0 166 129 216 230 7 7 chr10 110621312 110621406 -34967882 + C-rich Low_complexity Low_complexity 1 139 0 1406 193 17 27 chr10 110621407 110621702 -34967586 - AluSq SINE Alu -11 292 1 1459 181 4 11 chr10 110621808 110622084 -34967204 + L1ME3 LINE L1 3798 4071 -2144 * 1853 220 64 54 chr10 110622069 110622542 -34966746 + L1ME3 LINE L1 5460 5927 -308 1877 130 3 10 chr10 110622542 110622835 -34966453 + AluSx SINE Alu 5 295 -17 2287 79 0 0 chr10 110622843 110623135 -34966153 + AluSg SINE Alu 1 292 -18 1853 220 64 54 chr10 110623135 110623223 -34966065 + L1ME3 LINE L1 5933 6019 -216 1471 213 14 0 chr10 110623223 110623510 -34965778 + AluJo SINE Alu 1 291 -21 1853 220 64 54 chr10 110623510 110623523 -34965765 + L1ME3 LINE L1 6019 6030 -205 2191 75 0 10 chr10 110623523 110623817 -34965471 + AluY SINE Alu 19 309 -2 1853 220 64 54 chr10 110623817 110623917 -34965371 + L1ME3 LINE L1 6030 6139 -96 426 262 77 25 chr10 110623923 110624115 -34965173 - MER63 DNA MER1_type 0 1061 2 2103 103 7 10 chr10 110624354 110624664 -34964624 - AluY SINE Alu -2 309 1 365 324 62 45 chr10 110625899 110626075 -34963213 + MIR SINE MIR 80 258 -4 267 359 119 11 chr10 110626105 110626233 -34963055 + L2 LINE L2 1984 2097 -1217 1571 147 23 49 chr10 110626233 110626586 -34962702 - AluJb SINE Alu 0 312 1 267 359 119 11 chr10 110626586 110626819 -34962469 + L2 LINE L2 2097 2384 -930 193 0 94 0 chr10 110628514 110628546 -34960742 + T-rich Low_complexity Low_complexity 1 35 0 242 228 69 59 chr10 110632200 110632301 -34956987 - MIR3 SINE MIR -23 185 84 184 270 68 27 chr10 110634001 110634075 -34955213 + L2 LINE L2 3193 3269 -44 207 191 0 21 chr10 110635246 110635293 -34953995 + (CCCCAG)n Simple_repeat Simple_repeat 6 51 0 300 331 53 35 chr10 110636247 110636416 -34952872 + MIR SINE MIR 48 219 -43 1745 99 82 14 chr10 110636802 110637084 -34952204 + AluSx SINE Alu 1 301 -11 460 159 57 23 chr10 110637095 110637183 -34952105 + AluJ/FLAM SINE Alu 3 93 -219 333 235 153 0 chr10 110638042 110638140 -34951148 + MIR SINE MIR 71 183 -79 1748 161 3 10 chr10 110638191 110638489 -34950799 + AluJo SINE Alu 8 303 -9 228 204 0 0 chr10 110639421 110639470 -34949818 - L2 LINE L2 0 3313 3265 204 276 0 0 chr10 110639695 110639753 -34949535 - L3b LINE CR1 -184 1399 1342 1948 113 0 30 chr10 110639976 110640276 -34949012 - AluSg SINE Alu -19 291 1 204 351 13 0 chr10 110640623 110640700 -34948588 + (CGTG)n Simple_repeat Simple_repeat 4 81 0 272 294 84 25 chr10 110641494 110641613 -34947675 - L2 LINE L2 -10 3262 3137 498 268 29 14 chr10 110642074 110642212 -34947076 + MER45A DNA AcHobo 39 178 0 273 176 0 20 chr10 110642531 110642582 -34946706 + L2 LINE L2 3221 3270 -2 204 125 0 0 chr10 110644435 110644467 -34944821 + (CACTC)n Simple_repeat Simple_repeat 4 35 0 574 276 44 20 chr10 110645879 110646082 -34943206 + MIR SINE MIR 48 255 -7 2202 82 7 10 chr10 110646233 110646536 -34942752 + AluSq SINE Alu 1 302 -11 1453 219 78 12 chr10 110646983 110647498 -34941790 - MLT1E2 LTR MaLR -7 619 1 394 312 29 7 chr10 110647534 110647672 -34941616 + MIR3 SINE MIR 54 194 -14 1836 223 45 26 chr10 110650266 110650567 -34938721 - MLT1D LTR MaLR -2 503 188 1642 138 9 103 chr10 110650567 110650908 -34938380 - AluJb SINE Alu -3 309 1 1836 223 45 26 chr10 110650908 110651100 -34938188 - MLT1D LTR MaLR -317 188 1 268 288 136 8 chr10 110654181 110654299 -34934989 + MIR SINE MIR 63 195 -67 1392 130 0 14 chr10 110656092 110656308 -34932980 - AluSg/x SINE Alu -15 297 85 833 170 0 0 chr10 110656309 110656444 -34932844 - AluSq/x SINE Alu -177 135 1 26 57 0 0 chr10 110656656 110656691 -34932597 + AT_rich Low_complexity Low_complexity 1 35 0 268 304 11 11 chr10 110657403 110657495 -34931793 - MER5B DNA MER1_type -86 92 1 206 185 0 56 chr10 110657975 110658029 -34931259 + GA-rich Low_complexity Low_complexity 2 52 0 608 239 196 24 chr10 110658276 110658485 -34930803 - MIR SINE MIR -3 259 15 629 199 0 50 chr10 110658494 110658616 -34930672 + AluJo SINE Alu 2 118 -194 246 62 0 0 chr10 110658616 110658648 -34930640 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 629 199 0 50 chr10 110658648 110658666 -34930622 + AluJo SINE Alu 118 135 -177 264 230 40 30 chr10 110658675 110658775 -34930513 - L1MC5 LINE L1 -55 7906 7806 900 143 11 60 chr10 110659899 110660081 -34929207 - AluJb SINE Alu -11 301 129 297 248 171 9 chr10 110660660 110660765 -34928523 + L2 LINE L2 3189 3310 -3 232 47 23 23 chr10 110660781 110660824 -34928464 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 1879 107 18 11 chr10 110660826 110661106 -34928182 - AluSx SINE Alu -26 286 5 334 256 23 0 chr10 110662817 110662903 -34926385 - MIR3 SINE MIR -22 186 99 334 207 61 0 chr10 110662987 110663069 -34926219 - MIR SINE MIR -56 206 120 588 281 0 30 chr10 110663094 110663258 -34926030 + MIR3 SINE MIR 35 193 -15 1862 138 0 28 chr10 110663798 110663935 -34925353 + AluJb SINE Alu 1 140 -172 1800 115 3 48 chr10 110663935 110664249 -34925039 + AluSx SINE Alu 1 300 -12 1862 138 0 28 chr10 110664249 110664431 -34924857 + AluJb SINE Alu 140 311 -1 211 304 76 25 chr10 110664589 110664668 -34924620 - L2 LINE L2 -29 3284 3202 904 119 33 0 chr10 110664785 110664936 -34924352 - L1MB3 LINE L1 0 6183 6028 964 155 37 6 chr10 110664936 110665097 -34924191 - FRAM SINE Alu -11 165 1 1221 134 16 0 chr10 110665098 110665292 -34923996 - L1MB3 LINE L1 -144 6039 5843 1177 146 5 5 chr10 110665483 110665682 -34923606 - L1MB3 LINE L1 -335 5848 5650 2065 113 3 13 chr10 110666165 110666466 -34922822 - AluSq SINE Alu -15 298 1 26 98 0 0 chr10 110666522 110666604 -34922684 + AT_rich Low_complexity Low_complexity 1 82 0 926 143 27 0 chr10 110666734 110666881 -34922407 + FAM SINE Alu 21 171 -14 1674 156 10 10 chr10 110666918 110667207 -34922081 + AluJb SINE Alu 1 289 -23 1977 128 7 0 chr10 110667216 110667504 -34921784 + AluSc SINE Alu 1 290 -19 288 198 189 19 chr10 110667505 110667611 -34921677 + MIR SINE MIR 118 241 -21 1626 107 0 21 chr10 110668072 110668314 -34920974 - AluSg/x SINE Alu -9 301 65 278 319 110 33 chr10 110668358 110668540 -34920748 - L2 LINE L2 0 3313 3118 313 308 25 8 chr10 110668820 110668940 -34920348 - L2 LINE L2 -217 3055 2934 623 289 56 22 chr10 110670789 110671021 -34918267 - MIR SINE MIR -2 260 21 2468 77 10 10 chr10 110673132 110673444 -34915844 - AluSp SINE Alu -1 312 1 301 216 167 10 chr10 110675457 110675559 -34913729 + L2 LINE L2 3151 3268 -4 322 167 17 0 chr10 110676082 110676142 -34913146 + L2 LINE L2 3251 3311 -2 338 145 48 0 chr10 110677925 110677987 -34911301 - MER72 LTR ERV1 -23 699 635 1441 196 0 48 chr10 110677999 110678039 -34911249 - AluJo SINE Alu 0 312 272 2292 94 3 13 chr10 110678039 110678337 -34910951 + AluSx SINE Alu 1 295 -17 1441 196 0 48 chr10 110678337 110678608 -34910680 - AluJo SINE Alu -40 272 16 350 123 0 18 chr10 110678629 110678686 -34910602 - MER72 LTR ERV1 -73 649 594 265 273 224 24 chr10 110679276 110679441 -34909847 + MIR SINE MIR 49 246 -16 329 216 24 42 chr10 110680052 110680147 -34909141 - MIR3 SINE MIR -38 170 77 506 232 124 24 chr10 110680394 110680617 -34908671 + MIR SINE MIR 22 262 0 2079 128 3 14 chr10 110680757 110681054 -34908234 - AluSx SINE Alu -16 296 3 959 86 0 16 chr10 110681086 110681214 -34908074 - FLAM_C SINE Alu -17 126 1 281 297 0 0 chr10 110681214 110681288 -34908000 + L2 LINE L2 3188 3261 -11 275 319 66 0 chr10 110682561 110682652 -34906636 + MIR3 SINE MIR 60 156 -52 21 0 0 0 chr10 110682703 110682724 -34906564 + AT_rich Low_complexity Low_complexity 1 21 0 329 296 37 37 chr10 110683787 110683895 -34905393 + MIR3 SINE MIR 47 154 -54 2396 93 3 3 chr10 110684588 110684898 -34904390 + AluSx SINE Alu 1 310 -2 216 171 0 0 chr10 110687441 110687476 -34901812 + (CA)n Simple_repeat Simple_repeat 1 35 0 274 331 46 82 chr10 110690995 110691385 -34897903 - L2 LINE L2 -26 3246 2871 184 277 106 11 chr10 110691503 110691597 -34897691 - MIR3 SINE MIR -41 167 65 622 255 28 0 chr10 110691765 110691910 -34897378 - MIR SINE MIR -3 259 111 2439 81 0 3 chr10 110694064 110694362 -34894926 + AluY SINE Alu 3 299 -12 747 162 0 29 chr10 110695330 110695466 -34893822 - FLAM_C SINE Alu 0 133 2 1912 160 0 10 chr10 110695939 110696239 -34893049 + AluJo SINE Alu 1 297 -15 362 256 90 23 chr10 110696301 110696434 -34892854 - MIR SINE MIR -12 250 109 593 304 109 12 chr10 110696481 110696738 -34892550 + L3 LINE CR1 1167 1448 -129 1019 192 0 25 chr10 110697003 110697144 -34892144 + L1MD2 LINE L1 5068 5201 -950 2526 77 0 6 chr10 110697144 110697455 -34891833 + AluY SINE Alu 1 309 -2 1019 192 0 25 chr10 110697455 110697560 -34891728 + L1MD2 LINE L1 5201 5307 -844 640 170 0 0 chr10 110697560 110697660 -34891628 + U6 snRNA snRNA 2 101 -6 534 151 117 62 chr10 110697661 110697840 -34891448 + L1MD2 LINE L1 5298 5486 -873 1168 162 57 19 chr10 110697842 110698052 -34891236 + AluJo SINE Alu 3 220 -92 3312 181 103 21 chr10 110698117 110698778 -34890510 + L1MD2 LINE L1 5470 6214 -145 324 64 0 0 chr10 110698778 110698825 -34890463 + (CA)n Simple_repeat Simple_repeat 2 48 0 3312 181 103 21 chr10 110698825 110698985 -34890303 + L1MD2 LINE L1 6214 6359 0 2172 104 3 3 chr10 110701224 110701513 -34887775 - AluSc SINE Alu -20 289 1 857 93 0 43 chr10 110701777 110701916 -34887372 - FLAM_C SINE Alu 0 133 1 220 288 96 0 chr10 110702437 110702510 -34886778 - MIR SINE MIR -81 181 102 297 167 0 17 chr10 110703200 110703260 -34886028 + L2 LINE L2 3254 3312 -1 841 230 32 44 chr10 110703914 110704027 -34885261 - MIR SINE MIR 0 262 149 2116 123 3 0 chr10 110704027 110704319 -34884969 - AluSx SINE Alu -19 293 1 841 230 32 44 chr10 110704319 110704457 -34884831 - MIR SINE MIR -113 149 14 299 247 111 0 chr10 110704496 110704577 -34884711 + L2 LINE L2 3183 3272 0 654 236 159 16 chr10 110706055 110706364 -34882924 + L1ME4a LINE L1 5766 6118 -3 2432 95 0 0 chr10 110706368 110706672 -34882616 - AluY SINE Alu -7 304 1 195 42 0 0 chr10 110706959 110706983 -34882305 + (CA)n Simple_repeat Simple_repeat 2 25 0 421 294 16 16 chr10 110707793 110707919 -34881369 + MIR SINE MIR 61 186 -76 2205 75 11 7 chr10 110707921 110708062 -34881226 + L1PA7 LINE L1 5542 5681 -473 2205 75 13 3 chr10 110708062 110708368 -34880920 + L1PA7 LINE L1 5842 6150 -4 2205 75 11 7 chr10 110708368 110708410 -34880878 + L1PA7 LINE L1 5681 6150 -4 297 274 96 82 chr10 110708528 110708593 -34880695 + L1MC4a LINE L1 4315 4378 -1768 2030 113 19 38 chr10 110708593 110708911 -34880377 + AluSx SINE Alu 1 312 0 297 274 96 82 chr10 110708911 110709721 -34879567 + L1MC4a LINE L1 4378 5202 -944 3292 115 11 39 chr10 110709739 110710279 -34879009 + MER1A DNA MER1_type 3 527 0 1854 160 0 26 chr10 110710328 110710635 -34878653 + AluJo SINE Alu 1 299 -13 380 237 142 7 chr10 110710712 110710845 -34878443 + L1MC4a LINE L1 5273 5432 -732 1995 115 16 53 chr10 110710845 110711168 -34878120 + AluSx SINE Alu 1 311 -1 380 237 142 7 chr10 110711168 110711181 -34878107 + L1MC4a LINE L1 5432 5442 -722 287 273 23 11 chr10 110711227 110711315 -34877973 - MIR SINE MIR -1 261 173 581 176 109 71 chr10 110711318 110711372 -34877916 + L1MC5 LINE L1 7626 7676 -285 2376 100 0 3 chr10 110711372 110711672 -34877616 - AluSq SINE Alu -14 299 1 581 176 109 71 chr10 110711672 110711827 -34877461 + L1MC5 LINE L1 7676 7843 -118 2536 63 0 32 chr10 110711885 110712201 -34877087 + AluY SINE Alu 1 306 -5 2179 128 27 0 chr10 110712210 110712507 -34876781 + AluSx SINE Alu 1 305 -7 418 278 56 7 chr10 110712537 110712681 -34876607 - MIR SINE MIR -109 153 3 830 346 35 17 chr10 110712694 110713154 -34876134 + L1MC4a LINE L1 5437 5904 -1904 273 237 129 0 chr10 110714687 110714780 -34874508 + MLT1K LTR MaLR 484 588 0 1831 148 0 77 chr10 110715290 110715627 -34873661 - AluSx SINE Alu -1 311 1 2373 83 0 3 chr10 110715654 110715943 -34873345 - AluSx SINE Alu -24 288 1 2053 149 3 3 chr10 110716701 110717002 -34872286 + AluSx SINE Alu 4 304 -8 867 144 0 0 chr10 110717083 110717201 -34872087 + FLAM_C SINE Alu 1 118 -25 25 0 0 0 chr10 110717201 110717226 -34872062 + AT_rich Low_complexity Low_complexity 1 25 0 195 324 65 9 chr10 110720439 110720547 -34868741 - L2 LINE L2 -1 3312 3199 678 289 95 12 chr10 110720663 110720905 -34868383 + MIR SINE MIR 1 262 0 2319 92 0 13 chr10 110728761 110729064 -34860224 + AluSc SINE Alu 1 299 -10 614 171 0 95 chr10 110729158 110729343 -34859945 + L1MB8 LINE L1 6007 6178 0 402 257 129 26 chr10 110729581 110729746 -34859542 - L1ME4a LINE L1 -211 5910 5763 1691 172 0 34 chr10 110729746 110730066 -34859222 - AluJo SINE Alu -3 309 1 402 257 129 26 chr10 110730066 110730203 -34859085 - L1ME4a LINE L1 -358 5763 5577 2262 105 0 29 chr10 110732312 110732627 -34856661 + AluSx SINE Alu 1 306 -6 2202 96 0 11 chr10 110733236 110733518 -34855770 + AluSg SINE Alu 1 279 -31 200 244 22 0 chr10 110735889 110735934 -34853354 + L2 LINE L2 3218 3263 -50 183 220 0 0 chr10 110735994 110736044 -34853244 + GA-rich Low_complexity Low_complexity 1 50 0 2307 95 10 0 chr10 110839112 110839417 -34749871 + AluSx SINE Alu 1 308 -4 481 182 50 0 chr10 110841077 110841198 -34748090 + L1ME4a LINE L1 5994 6120 -1 955 204 114 72 chr10 110841704 110842091 -34747197 + L1ME2 LINE L1 4859 5261 -885 2273 204 72 54 chr10 110842144 110842704 -34746584 + L1ME2 LINE L1 5521 6094 -70 929 235 0 0 chr10 110842704 110842870 -34746418 + FRAM SINE Alu 1 166 0 2273 204 72 54 chr10 110842870 110842923 -34746365 + L1ME2 LINE L1 6094 6145 -19 439 243 243 0 chr10 110842989 110843158 -34746130 + L1MC4 LINE L1 7829 8038 -4 2443 78 0 10 chr10 110843483 110843791 -34745497 - AluY SINE Alu -5 306 2 387 89 0 0 chr10 110844166 110844222 -34745066 - AluJ/FLAM SINE Alu -202 100 45 288 96 0 19 chr10 110844219 110844271 -34745017 - AluJ/FLAM SINE Alu -207 95 45 * 260 152 0 22 chr10 110844344 110844390 -34744898 - MIR SINE MIR -5 257 213 282 234 99 9 chr10 110844677 110844788 -34744500 + L1ME4a LINE L1 5963 6083 -38 2518 116 14 6 chr10 110844803 110845158 -34744130 - L1PB3 LINE L1 0 6154 5797 398 284 146 17 chr10 110845798 110846037 -34743251 + L1ME LINE L1 5553 5822 -299 2296 102 0 0 chr10 110846170 110846492 -34742796 + AluSq SINE Alu 1 322 0 2448 46 0 0 chr10 110846500 110846824 -34742464 + AluY SINE Alu 1 324 0 323 331 50 22 chr10 110846931 110847070 -34742218 + MIR3 SINE MIR 4 146 -62 26 0 0 0 chr10 110849013 110849039 -34740249 + AT_rich Low_complexity Low_complexity 1 26 0 1862 126 31 44 chr10 110849039 110849196 -34740092 - AluSx SINE Alu -23 289 136 2293 85 0 10 chr10 110849196 110849490 -34739798 - AluY SINE Alu -20 291 1 1862 126 31 44 chr10 110849490 110849625 -34739663 - AluSx SINE Alu -176 136 1 603 287 12 0 chr10 110851300 110851464 -34737824 + MER103 DNA DNA 1 166 0 248 262 16 0 chr10 110853160 110853221 -34736067 + MIR3 SINE MIR 144 205 -3 286 271 188 38 chr10 110856017 110856150 -34733138 - MIR SINE MIR -13 249 97 247 164 33 0 chr10 110857331 110857392 -34731896 + (TA)n Simple_repeat Simple_repeat 1 63 0 2117 105 34 0 chr10 110857538 110857833 -34731455 + AluSp SINE Alu 1 305 -8 255 303 130 6 chr10 110858022 110858184 -34731104 + L1P2 LINE L1 5254 5435 -719 229 191 0 0 chr10 110858365 110858407 -34730881 + L1MB7 LINE L1 6142 6183 -1 23 48 0 48 chr10 110859369 110859432 -34729856 + GC_rich Low_complexity Low_complexity 1 60 0 207 0 0 0 chr10 110859665 110859688 -34729600 + (TCC)n Simple_repeat Simple_repeat 1 23 0 274 263 11 84 chr10 110859935 110860125 -34729163 + C-rich Low_complexity Low_complexity 5 180 0 26 82 0 0 chr10 110860172 110860233 -34729055 + GC_rich Low_complexity Low_complexity 1 61 0 1321 154 150 19 chr10 110860884 110861151 -34728137 + MER33 DNA MER1_type 1 302 -22 240 248 129 30 chr10 110861503 110861604 -34727684 + MIR SINE MIR 107 217 -45 2471 48 0 3 chr10 110862181 110862472 -34726816 - AluY SINE Alu -21 290 1 2686 40 0 0 chr10 110862472 110862775 -34726513 - AluY SINE Alu -8 303 1 1842 87 83 11 chr10 110862844 110863120 -34726168 + AluSq SINE Alu 1 296 -17 2124 123 0 0 chr10 110863651 110863944 -34725344 - AluSx SINE Alu -19 293 1 29 28 0 0 chr10 110864048 110864084 -34725204 + AT_rich Low_complexity Low_complexity 1 36 0 2025 136 20 0 chr10 110864107 110864408 -34724880 + AluSx SINE Alu 1 307 -5 1089 146 94 5 chr10 110864471 110864663 -34724625 - AluJb SINE Alu -17 295 87 207 220 0 40 chr10 110865046 110865096 -34724192 - MIR SINE MIR -11 251 204 1694 146 3 82 chr10 110865098 110865426 -34723862 + AluJb SINE Alu 1 302 -10 547 226 38 0 chr10 110865442 110865575 -34723713 + HAL1b LINE L1 937 1074 -274 308 229 152 19 chr10 110865644 110865749 -34723539 + HAL1b LINE L1 1179 1297 -51 1811 161 7 17 chr10 110865909 110866200 -34723088 + AluJo SINE Alu 1 288 -24 2411 95 0 0 chr10 110866528 110866834 -34722454 + AluSc SINE Alu 1 306 -3 467 255 13 13 chr10 110866851 110867000 -34722288 + L1ME4a LINE L1 5964 6112 -9 1159 129 166 13 chr10 110867079 110867531 -34721757 + L1MC3 LINE L1 7137 7782 -3 1709 154 4 0 chr10 110867546 110867806 -34721482 + AluSq SINE Alu 5 265 -48 23 0 0 0 chr10 110867896 110867919 -34721369 + AT_rich Low_complexity Low_complexity 1 23 0 2228 98 27 3 chr10 110868256 110868553 -34720735 + AluSx SINE Alu 1 304 -8 266 263 26 0 chr10 110869200 110869276 -34720012 + (CA)n Simple_repeat Simple_repeat 2 79 0 2005 128 0 14 chr10 110870051 110870187 -34719101 + AluSx SINE Alu 1 137 -171 2296 102 0 3 chr10 110870187 110870490 -34718798 + AluSg SINE Alu 1 302 -8 2005 128 0 14 chr10 110870490 110870665 -34718623 + AluSx SINE Alu 137 308 0 1858 147 0 39 chr10 110871061 110871187 -34718101 + AluJb SINE Alu 11 140 -172 2358 79 7 0 chr10 110871187 110871478 -34717810 + AluSc SINE Alu 1 293 -16 1858 147 0 39 chr10 110871478 110871657 -34717631 + AluJb SINE Alu 140 304 -8 24 53 0 0 chr10 110871735 110871773 -34717515 + AT_rich Low_complexity Low_complexity 1 38 0 584 227 97 16 chr10 110871887 110872072 -34717216 + L1MC4a LINE L1 5741 5940 -1868 200 170 19 0 chr10 110872714 110872767 -34716521 + (CA)n Simple_repeat Simple_repeat 2 55 0 33 0 0 0 chr10 110873073 110873106 -34716182 + AT_rich Low_complexity Low_complexity 1 33 0 465 66 0 0 chr10 110874365 110874426 -34714862 + (TA)n Simple_repeat Simple_repeat 1 61 0 207 100 0 0 chr10 110874919 110874949 -34714339 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 261 163 0 0 chr10 110875600 110875649 -34713639 + T-rich Low_complexity Low_complexity 1 49 0 27 49 0 0 chr10 110876264 110876305 -34712983 + AT_rich Low_complexity Low_complexity 1 41 0 460 243 76 0 chr10 110876339 110876483 -34712805 + L1MC/D LINE L1 5667 5821 -1987 2270 103 0 0 chr10 110876508 110876818 -34712470 + AluSx SINE Alu 1 310 -2 2040 125 3 6 chr10 110876869 110877180 -34712108 + AluJb SINE Alu 1 310 -2 1848 135 17 7 chr10 110877410 110877706 -34711582 - AluJb SINE Alu -13 299 1 5646 109 41 65 chr10 110877809 110877950 -34711338 - L1MA8 LINE L1 -3 6288 6145 228 162 0 0 chr10 110877950 110877987 -34711301 - Alu SINE Alu -125 183 147 5646 109 41 65 chr10 110877987 110878511 -34710777 - L1MA8 LINE L1 -146 6145 5618 2090 96 24 3 chr10 110878511 110878803 -34710485 - AluSp SINE Alu -15 298 1 5646 109 41 65 chr10 110878803 110879151 -34710137 - L1MA8 LINE L1 -673 5618 5263 807 198 60 12 chr10 110879174 110879341 -34709947 - AluJo SINE Alu -19 293 119 2140 159 57 81 chr10 110879341 110879738 -34709550 - L1 LINE L1 -885 5261 4856 778 138 26 0 chr10 110879738 110879854 -34709434 + FLAM_C SINE Alu 3 121 -22 201 74 0 0 chr10 110879854 110879881 -34709407 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2140 159 57 81 chr10 110879881 110879955 -34709333 - L1 LINE L1 -1289 4857 4783 1450 185 41 0 chr10 110879955 110880139 -34709149 - AluJo SINE Alu 0 316 115 647 57 11 0 chr10 110880139 110880227 -34709061 + (TTTTA)n Simple_repeat Simple_repeat 2 90 0 1450 185 41 0 chr10 110880227 110880347 -34708941 - AluJo SINE Alu -201 115 1 2140 159 57 81 chr10 110880347 110880550 -34708738 - L1 LINE L1 -1363 4783 4577 2076 103 3 3 chr10 110880550 110880841 -34708447 - AluSg SINE Alu -19 291 1 2140 159 57 81 chr10 110880841 110880922 -34708366 - L1 LINE L1 -1569 4577 4495 2058 101 28 0 chr10 110880922 110881208 -34708080 - AluSx SINE Alu -18 294 1 2140 159 57 81 chr10 110881208 110881254 -34708034 - L1 LINE L1 -1651 4495 4449 1624 150 66 0 chr10 110881292 110881565 -34707723 + AluJb SINE Alu 6 296 -16 4039 157 6 7 chr10 110881571 110882257 -34707031 - L1MB4 LINE L1 0 6180 5496 1501 135 112 4 chr10 110882261 110882521 -34706767 - AluJb SINE Alu -13 299 12 1829 147 0 3 chr10 110882536 110882829 -34706459 - AluJb SINE Alu -10 302 11 1981 116 0 3 chr10 110882898 110883216 -34706072 + AluSx SINE Alu 1 317 0 625 232 97 54 chr10 110883244 110883276 -34706012 - L1ME4a LINE L1 -262 5859 5830 2190 94 3 0 chr10 110883276 110883573 -34705715 + AluSp SINE Alu 1 298 -15 625 232 97 54 chr10 110883573 110883799 -34705489 - L1ME4a LINE L1 -291 5830 5590 1880 106 0 78 chr10 110884306 110884626 -34704662 - AluSx SINE Alu -17 295 1 586 295 46 37 chr10 110884901 110885118 -34704170 + MIR SINE MIR 28 246 -16 181 289 134 28 chr10 110885122 110885264 -34704024 + L2 LINE L2 2907 3063 -209 2017 96 7 3 chr10 110885385 110885676 -34703612 - AluSg SINE Alu -18 292 1 1961 125 7 0 chr10 110885771 110886058 -34703230 - AluSx SINE Alu -17 295 7 322 316 23 41 chr10 110886241 110886406 -34702882 - MIR SINE MIR -81 181 22 701 158 8 24 chr10 110887219 110887346 -34701942 + FLAM_C SINE Alu 2 126 -7 1755 161 10 10 chr10 110887381 110887686 -34701602 - AluJo SINE Alu -7 305 1 217 296 70 0 chr10 110887848 110887919 -34701369 - L2 LINE L2 -4 3268 3193 830 120 0 30 chr10 110888085 110888218 -34701070 + FLAM_C SINE Alu 15 143 0 1588 176 25 3 chr10 110888343 110888627 -34700661 - AluJb SINE Alu -21 291 2 584 183 25 69 chr10 110888993 110889195 -34700093 + L1M4 LINE L1 4330 4522 -1624 253 209 0 58 chr10 110889168 110889254 -34700034 + L1M4 LINE L1 4274 4354 -1792 * 1622 157 16 38 chr10 110889265 110889584 -34699704 - AluJo SINE Alu 0 312 1 236 172 190 35 chr10 110891487 110891545 -34697743 + MIR SINE MIR 38 104 -104 281 227 169 92 chr10 110891567 110891614 -34697674 - MER112 DNA MER1_type -37 223 181 2034 98 7 0 chr10 110891614 110891901 -34697387 - AluSx SINE Alu -23 289 1 281 227 169 92 chr10 110891901 110892060 -34697228 - MER112 DNA MER1_type -79 181 1 2063 147 34 3 chr10 110892068 110892395 -34696893 - MER1B DNA MER1_type 0 337 1 365 333 139 12 chr10 110892486 110892831 -34696457 - L2 LINE L2 -13 3300 2912 2167 86 7 13 chr10 110892986 110893288 -34696000 + AluSx SINE Alu 11 310 -2 352 282 286 9 chr10 110893313 110893526 -34695762 - L2 LINE L2 -34 3279 3008 186 284 178 77 chr10 110893534 110893703 -34695585 + MIR SINE MIR 67 252 -10 336 95 0 0 chr10 110893756 110893798 -34695490 + AluSp SINE Alu 3 44 -259 1846 114 4 0 chr10 110893830 110894101 -34695187 + AluSp SINE Alu 42 313 0 379 207 96 74 chr10 110894187 110894322 -34694966 - LTR16B LTR ERVL 0 464 327 2104 136 0 48 chr10 110894322 110894697 -34694591 - L1MB3 LINE L1 -344 5839 5483 2730 83 5 31 chr10 110894699 110894919 -34694369 - THE1C LTR MaLR 0 375 168 2160 62 45 10 chr10 110894919 110895041 -34694247 + AluY SINE Alu 1 117 -194 180 0 0 0 chr10 110895041 110895061 -34694227 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 2160 62 45 10 chr10 110895061 110895228 -34694060 + AluY SINE Alu 117 300 -11 2730 83 5 31 chr10 110895228 110895392 -34693896 - THE1C LTR MaLR -207 168 1 204 40 0 0 chr10 110895397 110895422 -34693866 + (TTTG)n Simple_repeat Simple_repeat 3 27 0 1156 184 107 0 chr10 110895440 110895674 -34693614 - AluJo SINE Alu -53 259 1 651 72 0 166 chr10 110895674 110895750 -34693538 - L1M LINE L1 -782 5398 5311 2128 114 3 0 chr10 110895750 110896049 -34693239 - AluSg SINE Alu -10 300 1 2359 84 0 0 chr10 110896058 110896357 -34692931 - AluSg SINE Alu -11 299 1 651 72 0 166 chr10 110896357 110896409 -34692879 - L1M LINE L1 -878 5302 5283 236 88 0 0 chr10 110896410 110896444 -34692844 - Alu SINE Alu -232 71 38 460 123 0 0 chr10 110896446 110896511 -34692777 - AluS SINE Alu -242 71 7 411 217 174 0 chr10 110896520 110896635 -34692653 - MIR SINE MIR -114 148 14 1596 166 16 22 chr10 110896702 110897015 -34692273 + AluJo SINE Alu 1 311 -1 996 253 8 13 chr10 110897276 110897513 -34691775 + MIR SINE MIR 19 254 -8 189 0 0 0 chr10 110897590 110897611 -34691677 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 434 232 119 79 chr10 110898692 110898809 -34690479 - MIR SINE MIR 0 262 134 2008 82 72 7 chr10 110898809 110899100 -34690188 - AluY SINE Alu -1 310 1 434 232 119 79 chr10 110899100 110899159 -34690129 - MIR SINE MIR -128 134 79 956 242 6 63 chr10 110899174 110899509 -34689779 + L1ME2 LINE L1 5840 6155 -9 741 174 23 15 chr10 110899534 110899666 -34689622 + FLAM_A SINE Alu 1 133 0 33 43 0 0 chr10 110899720 110899767 -34689521 + AT_rich Low_complexity Low_complexity 1 47 0 2147 100 3 0 chr10 110899775 110900074 -34689214 + AluSp SINE Alu 1 300 -13 1795 130 16 41 chr10 110900290 110900605 -34688683 - AluSx SINE Alu -5 307 1 2323 177 63 2 chr10 110900782 110901274 -34688014 - Charlie1b DNA MER1_type 0 523 2 1878 147 6 31 chr10 110901277 110901597 -34687691 + AluJb SINE Alu 1 312 0 267 215 15 62 chr10 110901737 110901802 -34687486 + L3 LINE CR1 1508 1569 -8 2293 88 0 25 chr10 110902246 110902566 -34686722 - AluSx SINE Alu 0 312 1 283 236 0 0 chr10 110902569 110902624 -34686664 + MIR SINE MIR 100 154 -108 1979 115 3 14 chr10 110902630 110902950 -34686338 - AluSx SINE Alu 0 312 1 1266 193 63 63 chr10 110902978 110903223 -34686065 + AluJo SINE Alu 3 251 -51 2168 67 11 11 chr10 110903223 110903528 -34685760 + AluY SINE Alu 1 305 0 1266 193 63 63 chr10 110903528 110903581 -34685707 + AluJo SINE Alu 250 302 0 540 228 197 0 chr10 110903607 110903734 -34685554 + FRAM SINE Alu 1 152 -14 675 191 114 0 chr10 110903744 110903875 -34685413 - FRAM SINE Alu -30 146 1 237 376 0 18 chr10 110903877 110903986 -34685302 + MIR SINE MIR 152 258 -4 206 261 185 4 chr10 110904044 110904160 -34685128 + MIR SINE MIR 45 231 -31 597 231 178 29 chr10 110904497 110904705 -34684583 + MIR SINE MIR 24 262 0 184 57 29 29 chr10 110904901 110904936 -34684352 + (GGGAGA)n Simple_repeat Simple_repeat 4 38 0 2178 106 0 0 chr10 110905010 110905312 -34683976 + AluSx SINE Alu 1 302 -10 301 287 46 11 chr10 110905859 110905946 -34683342 - MIR SINE MIR -148 114 25 2321 70 3 0 chr10 110906084 110906384 -34682904 + AluSx SINE Alu 1 301 -11 2155 106 35 56 chr10 110907169 110907523 -34681765 + L1MB8 LINE L1 5792 6138 -90 1783 145 0 17 chr10 110907523 110907813 -34681475 - AluJb SINE Alu -27 285 1 2155 106 35 56 chr10 110907813 110907903 -34681385 + L1MB8 LINE L1 6138 6228 0 1466 166 76 10 chr10 110908050 110908298 -34680990 + MER33 DNA MER1_type 1 274 -2311 953 193 156 37 chr10 110908298 110908567 -34680721 + AluJo SINE Alu 2 302 0 1466 166 76 10 chr10 110908567 110908620 -34680668 + MER33 DNA MER1_type 274 322 -2 1809 190 24 3 chr10 110908663 110908994 -34680294 - MER58B DNA MER1_type 0 341 4 403 294 0 0 chr10 110909110 110909229 -34680059 - MIR3 SINE MIR -4 204 86 1753 153 7 7 chr10 110909398 110909699 -34679589 - AluJb SINE Alu -7 305 5 1962 126 3 22 chr10 110909709 110910026 -34679262 - AluJo SINE Alu -1 311 1 397 325 121 32 chr10 110910026 110910557 -34678731 - L2 LINE L2 -14 3258 2681 223 274 214 51 chr10 110910869 110910986 -34678302 + MIR SINE MIR 117 252 -10 2258 87 3 0 chr10 110911120 110911419 -34677869 - AluSp SINE Alu -13 300 1 823 135 8 8 chr10 110911521 110911654 -34677634 + AluJb SINE Alu 154 286 -26 2007 148 24 9 chr10 110911922 110912253 -34677035 - MER7A DNA MER2_type -3 343 10 2116 121 0 0 chr10 110912430 110912719 -34676569 + AluSq SINE Alu 1 289 -24 259 53 107 0 chr10 110912719 110912794 -34676494 + (TA)n Simple_repeat Simple_repeat 2 84 0 310 215 197 44 chr10 110912794 110912961 -34676327 - L1MCa LINE L1 -1333 6989 1992 456 107 82 13 chr10 110912964 110913123 -34676165 + (TA)n Simple_repeat Simple_repeat 2 171 0 282 254 0 0 chr10 110913874 110913933 -34675355 - MIR SINE MIR -117 145 87 372 228 13 0 chr10 110914108 110914187 -34675101 + MIR3 SINE MIR 98 177 -31 188 295 115 41 chr10 110915219 110915341 -34673947 - L2 LINE L2 -1 3271 3141 2495 43 0 0 chr10 110915352 110915655 -34673633 + AluY SINE Alu 1 303 -8 2435 74 0 7 chr10 110915770 110916080 -34673208 - AluSp SINE Alu -5 308 1 1678 160 42 30 chr10 110916526 110916746 -34672542 + L1MB7 LINE L1 5827 6055 -129 1643 158 7 34 chr10 110916746 110917081 -34672207 + AluJb SINE Alu 1 327 0 1678 160 42 30 chr10 110917081 110917196 -34672092 + L1MB7 LINE L1 6055 6167 -17 612 206 0 0 chr10 110917271 110917378 -34671910 - AluJ SINE Alu -21 291 185 246 32 0 0 chr10 110917733 110917764 -34671524 + (TTCC)n Simple_repeat Simple_repeat 2 32 0 204 331 59 44 chr10 110917765 110917901 -34671387 - L2 LINE L2 -1 3271 3134 254 226 48 16 chr10 110918313 110918375 -34670913 - MIR SINE MIR -98 110 47 240 154 0 0 chr10 110918838 110918877 -34670411 - AluJo SINE Alu -8 294 256 1277 159 5 0 chr10 110918877 110919084 -34670204 - AluJo SINE Alu -104 208 1 473 217 15 158 chr10 110919102 110919305 -34669983 + MIR SINE MIR 77 250 -12 185 196 22 0 chr10 110919442 110919488 -34669800 - L2 LINE L2 0 3313 3267 224 332 50 88 chr10 110919628 110919739 -34669549 - L2 LINE L2 -351 2963 2849 532 222 48 0 chr10 110919739 110919865 -34669423 + FLAM_C SINE Alu 2 133 0 224 332 50 88 chr10 110919865 110919878 -34669410 - L2 LINE L2 -465 2849 2837 2100 102 0 20 chr10 110919878 110920183 -34669105 + AluSg SINE Alu 2 300 -10 224 332 50 88 chr10 110920183 110920376 -34668912 - L2 LINE L2 -477 2837 2657 378 0 0 0 chr10 110920712 110920754 -34668534 + (TA)n Simple_repeat Simple_repeat 2 43 0 2137 87 7 30 chr10 110920754 110921053 -34668235 - AluY SINE Alu -17 294 3 317 229 0 0 chr10 110921056 110921117 -34668171 - L1M4 LINE L1 -3834 2312 2252 2008 118 0 11 chr10 110921121 110921435 -34667853 - AluSx SINE Alu 0 311 1 202 149 128 0 chr10 110921447 110921494 -34667794 + MIR SINE MIR 72 124 -138 401 285 44 8 chr10 110921618 110921779 -34667509 + MIR SINE MIR 17 182 -69 1535 174 30 13 chr10 110921809 110922113 -34667175 + AluJo SINE Alu 1 309 -3 1922 144 20 0 chr10 110922119 110922425 -34666863 + AluJb SINE Alu 1 312 0 2256 76 0 0 chr10 110922434 110922723 -34666565 + AluSx SINE Alu 1 289 -23 194 333 0 0 chr10 110923029 110923077 -34666211 + L2 LINE L2 3173 3220 -93 528 246 62 67 chr10 110924004 110924199 -34665089 - MIR SINE MIR 0 262 69 317 313 221 13 chr10 110924299 110924507 -34664781 + MIR SINE MIR 4 250 -12 304 295 29 38 chr10 110925423 110925528 -34663760 - MIR3 SINE MIR -26 182 79 271 297 66 0 chr10 110925980 110926071 -34663217 + L2 LINE L2 3173 3269 -3 408 305 90 6 chr10 110926704 110926871 -34662417 - MIR SINE MIR -66 196 16 833 274 167 36 chr10 110929047 110929233 -34660055 - L2 LINE L2 -13 3300 3140 1524 142 111 45 chr10 110929233 110929522 -34659766 + AluSx SINE Alu 1 308 -4 1960 132 0 46 chr10 110929524 110929827 -34659461 + AluSx SINE Alu 1 289 -23 833 274 167 36 chr10 110929827 110930327 -34658961 - L2 LINE L2 -173 3140 2501 2400 231 68 11 chr10 110930482 110931186 -34658102 + L2 LINE L2 2006 2749 -565 1111 156 0 0 chr10 110931186 110931353 -34657935 + AluSg/x SINE Alu 131 297 -15 539 247 37 127 chr10 110931355 110931974 -34657314 + L2 LINE L2 2742 3313 0 207 0 0 0 chr10 110935206 110935229 -34654059 + (A)n Simple_repeat Simple_repeat 1 23 0 207 341 68 30 chr10 110936721 110936853 -34652435 + MIR3 SINE MIR 27 163 -45 267 223 91 8 chr10 110940576 110940701 -34648587 + MIR SINE MIR 44 185 -23 21 0 0 0 chr10 110940764 110940785 -34648503 + GC_rich Low_complexity Low_complexity 1 21 0 214 176 15 44 chr10 110940858 110940926 -34648362 + (CGGGG)n Simple_repeat Simple_repeat 3 68 0 325 234 27 54 chr10 110941182 110941366 -34647922 + G-rich Low_complexity Low_complexity 1 179 0 351 0 0 0 chr10 110941919 110941958 -34647330 + (CA)n Simple_repeat Simple_repeat 1 39 0 207 0 0 0 chr10 110942824 110942847 -34646441 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 242 229 14 0 chr10 110944049 110944119 -34645169 + (CA)n Simple_repeat Simple_repeat 1 71 0 189 0 0 0 chr10 110945599 110945620 -34643668 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 207 0 0 0 chr10 110947498 110947521 -34641767 + (CCA)n Simple_repeat Simple_repeat 1 23 0 1674 83 153 0 chr10 110951859 110952101 -34637187 - AluSc SINE Alu -30 279 1 827 127 0 63 chr10 110952104 110952246 -34637042 - AluJo/FLAM SINE Alu -169 133 1 256 194 8 0 chr10 110952745 110952802 -34636486 - Alu SINE Alu -6 296 249 210 71 0 0 chr10 110952824 110952852 -34636436 + (TC)n Simple_repeat Simple_repeat 2 29 0 543 222 0 0 chr10 110952856 110952955 -34636333 - AluJ/FLAM SINE Alu -212 100 2 1844 61 13 17 chr10 110952985 110953215 -34636073 + AluY SINE Alu 73 301 -10 1829 149 49 3 chr10 110953220 110953508 -34635780 + AluSx SINE Alu 1 301 -11 2254 103 0 13 chr10 110953515 110953816 -34635472 + AluSg SINE Alu 1 297 -13 640 185 231 5 chr10 110953822 110954038 -34635250 + L1MD3 LINE L1 7730 7994 -1 2355 111 3 0 chr10 110954281 110954588 -34634700 + AluSp SINE Alu 1 308 -5 1728 172 14 17 chr10 110954756 110955052 -34634236 + AluJb SINE Alu 1 295 -17 2358 99 3 13 chr10 110955327 110955641 -34633647 - AluSq SINE Alu -2 311 1 33 0 0 0 chr10 110955889 110955922 -34633366 + AT_rich Low_complexity Low_complexity 1 33 0 23 0 0 0 chr10 110956318 110956341 -34632947 + AT_rich Low_complexity Low_complexity 1 23 0 1353 154 31 101 chr10 110956738 110957056 -34632232 - AluJb SINE Alu -16 296 1 2289 80 40 10 chr10 110957070 110957372 -34631916 - AluY SINE Alu 0 311 1 1086 92 0 0 chr10 110957374 110957505 -34631783 - AluSq/x SINE Alu -182 131 1 243 0 0 0 chr10 110958254 110958281 -34631007 + (CAAAAA)n Simple_repeat Simple_repeat 2 28 0 24 0 0 0 chr10 110959197 110959221 -34630067 + AT_rich Low_complexity Low_complexity 1 24 0 1027 76 101 0 chr10 110960780 110960938 -34628350 + MER30 DNA MER1_type 2 175 -55 2146 122 0 0 chr10 110961345 110961624 -34627664 - AluSg SINE Alu -31 279 1 2134 112 0 59 chr10 110961628 110961951 -34627337 - AluSx SINE Alu -5 307 4 27 0 0 0 chr10 110962093 110962120 -34627168 + AT_rich Low_complexity Low_complexity 1 27 0 2364 88 7 10 chr10 110963473 110963778 -34625510 - AluSq SINE Alu -9 304 1 2322 100 0 0 chr10 110964944 110965235 -34624053 - AluSx SINE Alu -19 293 3 2153 136 7 0 chr10 110965833 110966135 -34623153 - AluSg SINE Alu -6 304 1 2343 113 0 3 chr10 110966173 110966482 -34622806 + AluSq SINE Alu 1 308 -5 2234 112 0 0 chr10 110966929 110967224 -34622064 + AluSg SINE Alu 1 295 -15 2392 78 17 0 chr10 110967456 110967752 -34621536 + AluSp SINE Alu 1 301 -12 2058 97 33 40 chr10 110967921 110968220 -34621068 + AluSx SINE Alu 1 297 -15 21 0 0 0 chr10 110968409 110968430 -34620858 + AT_rich Low_complexity Low_complexity 1 21 0 187 245 38 0 chr10 110968530 110968583 -34620705 - MIR SINE MIR -128 134 80 21 0 0 0 chr10 110968679 110968700 -34620588 + AT_rich Low_complexity Low_complexity 1 21 0 705 164 9 0 chr10 110969127 110969243 -34620045 + FLAM_C SINE Alu 1 117 -16 33 0 0 0 chr10 110969243 110969276 -34620012 + AT_rich Low_complexity Low_complexity 1 33 0 2501 70 0 3 chr10 110969337 110969637 -34619651 - AluY SINE Alu -12 299 1 1704 178 7 24 chr10 110969663 110969961 -34619327 - AluJo SINE Alu -19 293 1 1417 153 28 0 chr10 110970111 110970326 -34618962 - AluJb SINE Alu -22 290 70 2356 110 0 0 chr10 110970437 110970738 -34618550 + AluSp SINE Alu 1 301 -12 2558 55 0 0 chr10 110970738 110971029 -34618259 + AluY SINE Alu 1 291 -20 1969 109 4 14 chr10 110971257 110971533 -34617755 - AluSq SINE Alu -3 310 38 1075 121 0 0 chr10 110971856 110971997 -34617291 + AluJb SINE Alu 1 141 -171 30 59 0 0 chr10 110972014 110972065 -34617223 + AT_rich Low_complexity Low_complexity 1 51 0 1132 134 80 31 chr10 110973167 110973391 -34615897 - MER46A DNA MER2_type 0 236 2 2311 107 0 7 chr10 110973752 110974051 -34615237 + AluSg SINE Alu 1 297 -13 2115 121 34 0 chr10 110974498 110974795 -34614493 + AluSx SINE Alu 1 307 -5 2106 110 43 13 chr10 110974841 110975140 -34614148 + AluSg SINE Alu 3 310 0 418 113 56 14 chr10 110975810 110975881 -34613407 - AluSx SINE Alu -19 291 218 1020 136 86 6 chr10 110975881 110976043 -34613245 - AluSx SINE Alu -125 187 13 2268 108 3 13 chr10 110976172 110976487 -34612801 + AluSx SINE Alu 1 312 0 1660 179 39 7 chr10 110976501 110976781 -34612507 + AluJb SINE Alu 17 305 -7 926 148 0 7 chr10 110977325 110977499 -34611789 + AluSg/x SINE Alu 135 307 0 1270 158 33 21 chr10 110977547 110977788 -34611500 - MER96B DNA MER1_type? -171 246 3 2048 137 3 3 chr10 110979110 110979409 -34609879 + AluSx SINE Alu 1 299 -13 862 170 0 7 chr10 110979528 110979663 -34609625 + AluSg/x SINE Alu 158 291 -21 2343 69 0 23 chr10 110980344 110980648 -34608640 - AluSg SINE Alu -13 297 1 261 83 0 0 chr10 110981018 110981054 -34608234 + (A)n Simple_repeat Simple_repeat 1 36 0 1901 125 33 10 chr10 110981054 110981358 -34607930 + AluSx SINE Alu 1 311 -1 24 0 0 0 chr10 110981940 110981964 -34607324 + AT_rich Low_complexity Low_complexity 1 24 0 197 81 0 54 chr10 110983201 110983238 -34606050 + (CCCCCT)n Simple_repeat Simple_repeat 5 39 0 286 253 88 88 chr10 110984082 110984378 -34604910 - L2 LINE L2 -108 3164 2869 2256 99 3 26 chr10 110984703 110985007 -34604281 - AluSx SINE Alu -15 297 1 1537 159 46 33 chr10 110985101 110985403 -34603885 - AluJo SINE Alu -6 306 1 377 38 0 19 chr10 110985403 110985456 -34603832 + LTR56 LTR ERV1 11 62 -383 443 192 10 40 chr10 110985473 110985534 -34603754 + AluJo SINE Alu 74 132 -180 2472 63 36 0 chr10 110985534 110985836 -34603452 + AluSp SINE Alu 1 313 0 443 192 10 40 chr10 110985836 110985873 -34603415 + AluJo SINE Alu 132 169 -143 360 113 0 28 chr10 110985873 110985944 -34603344 + Alu SINE Alu 234 302 0 1800 134 87 34 chr10 110985969 110986009 -34603279 + LTR56 LTR ERV1 45 81 -364 2245 107 17 0 chr10 110986009 110986309 -34602979 + AluSg SINE Alu 1 305 -5 1800 134 87 34 chr10 110986309 110986649 -34602639 + LTR56 LTR ERV1 81 445 0 234 303 15 0 chr10 110986895 110986961 -34602327 + L2 LINE L2 3245 3311 -2 * 238 261 50 50 chr10 110986951 110987070 -34602218 - L2 LINE L2 -77 3236 3118 1087 268 140 39 chr10 110987124 110987411 -34601877 - L2 LINE L2 -698 2616 2360 1872 136 52 14 chr10 110987411 110987697 -34601591 + AluJo SINE Alu 1 297 -15 1087 268 140 39 chr10 110987697 110987979 -34601309 - L2 LINE L2 -954 2360 1989 2067 97 4 0 chr10 110988033 110988292 -34600996 + AluSx SINE Alu 6 265 -47 1622 150 112 4 chr10 110988425 110988692 -34600596 + AluJb SINE Alu 1 296 -16 272 255 39 78 chr10 110988788 110988941 -34600347 - L2 LINE L2 -50 3263 3117 2564 66 0 0 chr10 110989025 110989326 -34599962 - AluY SINE Alu -10 301 1 427 206 93 0 chr10 110989382 110989479 -34599809 + MIR3 SINE MIR 55 160 -48 2177 128 3 0 chr10 110989485 110989775 -34599513 - AluSx SINE Alu -17 295 5 2182 114 7 3 chr10 110990367 110990666 -34598622 + AluSx SINE Alu 7 306 -6 402 242 5 54 chr10 110994647 110994833 -34594455 + (CCCCG)n Simple_repeat Simple_repeat 3 179 0 282 56 0 0 chr10 110995745 110995781 -34593507 + (CA)n Simple_repeat Simple_repeat 1 36 0 258 305 17 35 chr10 110995923 110996097 -34593191 + (CACG)n Simple_repeat Simple_repeat 4 174 0 426 20 0 0 chr10 110997360 110997411 -34591877 + (TG)n Simple_repeat Simple_repeat 2 52 0 599 288 140 0 chr10 111000824 111001046 -34588242 - MIR SINE MIR -8 254 2 1440 135 161 0 chr10 111001339 111001599 -34587689 - AluSx SINE Alu 0 302 1 1152 174 101 23 chr10 111001682 111001744 -34587544 + AluJo SINE Alu 72 128 -184 2450 87 0 0 chr10 111001744 111002043 -34587245 + AluSg SINE Alu 1 299 -11 1152 174 101 23 chr10 111002043 111002199 -34587089 + AluJo SINE Alu 128 307 -5 362 239 23 0 chr10 111002219 111002307 -34586981 - MIR SINE MIR -44 218 129 191 200 0 0 chr10 111002325 111002360 -34586928 - MIR SINE MIR -111 151 117 2141 116 11 0 chr10 111002452 111002756 -34586532 + AluSg SINE Alu 1 307 0 21 57 0 0 chr10 111004980 111005015 -34584273 + GC_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr10 111005905 111005926 -34583362 + GC_rich Low_complexity Low_complexity 1 21 0 204 238 196 0 chr10 111006683 111006782 -34582506 - MIR SINE MIR -67 141 59 180 0 0 0 chr10 111008249 111008269 -34581019 + (CA)n Simple_repeat Simple_repeat 1 20 0 28 71 0 0 chr10 111008632 111008688 -34580600 + GC_rich Low_complexity Low_complexity 1 56 0 2231 97 3 10 chr10 111011743 111012041 -34577247 + AluSc SINE Alu 1 296 -13 240 371 53 41 chr10 111013132 111013302 -34575986 - MIR3 SINE MIR -18 190 19 2324 110 0 3 chr10 111015154 111015462 -34573826 - AluSx SINE Alu -5 307 1 2281 114 0 0 chr10 111015486 111015784 -34573504 - AluSx SINE Alu -10 302 5 2112 120 23 16 chr10 111017537 111017845 -34571443 + AluSx SINE Alu 1 310 -2 2206 110 7 23 chr10 111017944 111018254 -34571034 - AluSq SINE Alu -8 305 1 2427 94 0 0 chr10 111018896 111019194 -34570094 + AluSg SINE Alu 1 298 -12 238 351 26 0 chr10 111019251 111019328 -34569960 + MIR3 SINE MIR 78 156 -52 431 299 87 17 chr10 111019732 111019973 -34569315 + MIR SINE MIR 3 260 -2 2546 78 3 0 chr10 111020122 111020430 -34568858 - AluSq SINE Alu -4 309 1 737 178 0 0 chr10 111020491 111020609 -34568679 + AluJo/FLAM SINE Alu 1 118 -184 837 219 0 0 chr10 111020611 111020757 -34568531 - AluJb SINE Alu -14 298 153 321 90 67 0 chr10 111020762 111020851 -34568437 + (TA)n Simple_repeat Simple_repeat 1 95 0 388 276 123 47 chr10 111020857 111021027 -34568261 - MIR3 SINE MIR -15 193 11 1842 129 61 14 chr10 111022239 111022517 -34566771 + AluSx SINE Alu 1 291 -21 656 278 124 8 chr10 111023314 111023548 -34565740 + MIR SINE MIR 2 262 0 183 114 0 0 chr10 111025301 111025336 -34563952 + (TA)n Simple_repeat Simple_repeat 2 36 0 284 206 29 0 chr10 111025468 111025536 -34563752 + L1ME1 LINE L1 120 189 -6207 1009 305 96 32 chr10 111025587 111026213 -34563075 + L1ME1 LINE L1 347 1012 -5384 859 277 62 37 chr10 111026204 111026514 -34562774 + L1ME1 LINE L1 1404 1705 -4691 * 2246 123 3 0 chr10 111026514 111026814 -34562474 + AluSg SINE Alu 1 301 -9 2443 62 3 56 chr10 111026814 111027137 -34562151 + AluY SINE Alu 1 306 -5 859 277 62 37 chr10 111027137 111027229 -34562059 + L1ME1 LINE L1 1704 1817 -4579 1152 246 97 51 chr10 111027247 111027358 -34561930 + L1ME1 LINE L1 1918 2022 -4193 2136 132 0 0 chr10 111027358 111027653 -34561635 + AluSx SINE Alu 1 295 -17 1152 246 97 51 chr10 111027653 111027985 -34561303 + L1ME1 LINE L1 2022 2360 -3855 2253 60 4 0 chr10 111027985 111028252 -34561036 + AluSp SINE Alu 1 268 -45 1152 246 97 51 chr10 111028252 111028554 -34560734 + L1ME1 LINE L1 2360 2647 -3568 15087 123 39 84 chr10 111028556 111028705 -34560583 + Tigger2 DNA MER2_type 2 156 -2562 942 142 0 8 chr10 111028705 111028839 -34560449 + FLAM_C SINE Alu 1 133 0 2128 142 0 0 chr10 111028844 111029142 -34560146 + AluSg SINE Alu 1 299 -7 261 0 0 0 chr10 111029142 111029171 -34560117 + (CA)n Simple_repeat Simple_repeat 2 30 0 6643 46 35 0 chr10 111029176 111029958 -34559330 + L1PA5 LINE L1 5340 6148 -6 15087 123 39 84 chr10 111029958 111030034 -34559254 + Tigger2 DNA MER2_type 160 238 -2480 2182 84 0 0 chr10 111030034 111030309 -34558979 + AluY SINE Alu 37 311 0 15087 123 39 84 chr10 111030309 111030554 -34558734 + Tigger2 DNA MER2_type 238 493 -2225 2184 124 0 0 chr10 111030554 111030852 -34558436 - AluSx SINE Alu -14 298 1 15087 123 39 84 chr10 111030852 111031002 -34558286 + Tigger2 DNA MER2_type 493 648 -2070 2428 93 0 0 chr10 111031002 111031304 -34557984 + AluSq SINE Alu 1 302 -11 15087 123 39 84 chr10 111031304 111031963 -34557325 + Tigger2 DNA MER2_type 648 1335 -1383 242 0 61 0 chr10 111031963 111031996 -34557292 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 15087 123 39 84 chr10 111031996 111032614 -34556674 + Tigger2 DNA MER2_type 1335 1979 -739 1840 172 3 0 chr10 111032614 111032911 -34556377 + AluJo SINE Alu 1 298 -14 838 163 0 15 chr10 111032920 111033055 -34556233 + FLAM_C SINE Alu 1 133 0 15087 123 39 84 chr10 111033055 111033853 -34555435 + Tigger2 DNA MER2_type 1987 2589 -129 2337 111 0 0 chr10 111033853 111034151 -34555137 + AluSx SINE Alu 1 298 -14 15087 123 39 84 chr10 111034151 111034272 -34555016 + Tigger2 DNA MER2_type 2589 2714 -4 2628 239 87 3 chr10 111034277 111034815 -34554473 + L1ME1 LINE L1 2650 3288 -2927 1933 167 3 0 chr10 111034815 111035126 -34554162 + AluJb SINE Alu 1 312 0 2628 239 87 3 chr10 111035126 111035449 -34553839 + L1ME1 LINE L1 3288 3583 -2632 294 252 61 35 chr10 111035533 111035648 -34553640 + L1MC4 LINE L1 7924 8041 -1 * 852 210 14 18 chr10 111035641 111035860 -34553428 + L1ME1 LINE L1 3549 3766 -2449 951 141 0 37 chr10 111035875 111036038 -34553250 + AluJb SINE Alu 156 312 0 2505 210 77 85 chr10 111036047 111036782 -34552506 + L1ME1 LINE L1 4339 5079 -1154 2211 111 17 0 chr10 111036782 111037080 -34552208 + AluSx SINE Alu 1 303 -9 2505 210 77 85 chr10 111037080 111037478 -34551810 + L1ME1 LINE L1 5079 5479 -754 1518 117 0 5 chr10 111037478 111037684 -34551604 + AluSx SINE Alu 1 205 -107 2505 210 77 85 chr10 111037684 111037739 -34551549 + L1ME1 LINE L1 5479 5533 -700 2191 127 0 0 chr10 111037739 111038039 -34551249 + AluSx SINE Alu 1 300 -12 2505 210 77 85 chr10 111038039 111038185 -34551103 + L1ME1 LINE L1 5533 5654 -579 2153 90 0 35 chr10 111038185 111038473 -34550815 + AluSg SINE Alu 1 278 -32 195 69 0 0 chr10 111038476 111038505 -34550783 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 3131 162 19 9 chr10 111038536 111039073 -34550215 - L1MB7 LINE L1 -10 6174 5633 834 240 32 28 chr10 111039094 111039347 -34549941 + L1ME1 LINE L1 5944 6212 -31 2361 89 0 7 chr10 111041030 111041332 -34547956 + AluSc SINE Alu 1 300 -9 1112 163 0 6 chr10 111041989 111042167 -34547121 + AluJo SINE Alu 1 177 -135 940 148 0 7 chr10 111042175 111042317 -34546971 + AluJo SINE Alu 93 233 -79 745 186 0 0 chr10 111042317 111042435 -34546853 + AluJo SINE Alu 174 291 -21 2292 100 14 0 chr10 111042443 111042734 -34546554 + AluSg SINE Alu 1 295 -15 2066 140 3 3 chr10 111043039 111043347 -34545941 + AluSx SINE Alu 1 308 -4 1726 177 3 17 chr10 111043428 111043728 -34545560 + AluJo SINE Alu 13 308 -4 1064 170 16 11 chr10 111043730 111043912 -34545376 + AluJo SINE Alu 120 302 -10 443 209 127 30 chr10 111044268 111044402 -34544886 + MIR SINE MIR 20 166 -96 2184 105 20 7 chr10 111044419 111044715 -34544573 - AluSq SINE Alu -13 300 1 337 203 121 130 chr10 111045552 111045759 -34543529 - MER63A DNA MER1_type -2 208 4 526 215 56 42 chr10 111046436 111046644 -34542644 + L1MB2 LINE L1 5947 6171 0 200 291 0 0 chr10 111046671 111046726 -34542562 + L2 LINE L2 3213 3267 -5 2241 93 4 0 chr10 111047580 111047860 -34541428 - AluSg SINE Alu -29 281 1 1726 173 7 10 chr10 111048196 111048497 -34540791 + AluJo SINE Alu 1 300 -12 1587 192 0 17 chr10 111048787 111049050 -34540238 + AluJo SINE Alu 15 274 -38 243 0 0 0 chr10 111049050 111049077 -34540211 + (CA)n Simple_repeat Simple_repeat 1 27 0 1587 192 0 17 chr10 111049077 111049100 -34540188 + AluJo SINE Alu 274 296 -16 5125 143 45 24 chr10 111049656 111049834 -34539454 + L1MB4 LINE L1 4959 5132 -1048 193 29 59 0 chr10 111049834 111049868 -34539420 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 5125 143 45 24 chr10 111049868 111050835 -34538453 + L1MB4 LINE L1 5132 6130 -50 2151 92 7 10 chr10 111050835 111051130 -34538158 + AluSq SINE Alu 1 294 -19 5125 143 45 24 chr10 111051130 111051183 -34538105 + L1MB4 LINE L1 6130 6180 0 1982 139 20 7 chr10 111051293 111051594 -34537694 + AluSx SINE Alu 1 305 -7 1521 125 29 118 chr10 111052481 111052794 -34536494 - AluJb SINE Alu -26 286 2 28 0 0 0 chr10 111053122 111053150 -34536138 + AT_rich Low_complexity Low_complexity 1 28 0 212 364 68 34 chr10 111055022 111055198 -34534090 + L2 LINE L2 2429 2610 -704 296 146 146 56 chr10 111055236 111055283 -34534005 + L1MD3 LINE L1 7020 7061 -934 189 94 0 0 chr10 111055291 111055323 -34533965 + (TA)n Simple_repeat Simple_repeat 2 33 0 1540 168 24 24 chr10 111055323 111055605 -34533683 - AluJb SINE Alu -27 285 1 296 146 146 56 chr10 111055605 111055646 -34533642 + L1MD3 LINE L1 7061 7116 -879 318 302 23 0 chr10 111055646 111055732 -34533556 + MLT1A2 LTR MaLR 35 122 -445 2126 178 142 38 chr10 111055735 111055936 -34533352 + L1MD3 LINE L1 7404 7583 -412 2066 147 3 0 chr10 111055936 111056236 -34533052 - AluJo SINE Alu -10 302 2 2126 178 142 38 chr10 111056236 111056248 -34533040 + L1MD3 LINE L1 7583 7592 -403 2211 125 3 6 chr10 111056248 111056560 -34532728 - AluSq SINE Alu -2 311 1 2126 178 142 38 chr10 111056560 111056879 -34532409 + L1MD3 LINE L1 7592 7993 -2 1969 144 0 11 chr10 111056890 111057175 -34532113 + AluJb SINE Alu 1 282 -30 221 160 0 20 chr10 111057219 111057226 -34532062 + (TG)n Simple_repeat Simple_repeat 1 7 -42 1731 163 0 45 chr10 111057226 111057539 -34531749 + AluJb SINE Alu 1 299 -13 221 160 0 20 chr10 111057539 111057581 -34531707 + (TG)n Simple_repeat Simple_repeat 7 49 0 205 258 0 91 chr10 111057696 111057762 -34531526 + L2 LINE L2 3207 3266 -6 265 308 0 0 chr10 111057853 111057918 -34531370 + L2 LINE L2 3207 3271 -1 26 0 0 0 chr10 111058500 111058526 -34530762 + AT_rich Low_complexity Low_complexity 1 26 0 220 226 12 24 chr10 111058749 111058833 -34530455 + GA-rich Low_complexity Low_complexity 2 84 0 863 121 23 0 chr10 111059820 111059952 -34529336 + AluSp/q SINE Alu 167 301 -12 694 179 29 14 chr10 111059956 111060096 -34529192 + MLT1A2 LTR MaLR 165 306 -68 1948 169 112 21 chr10 111060163 111060339 -34528949 + L1ME LINE L1 4858 5017 -1157 2518 66 0 0 chr10 111060339 111060642 -34528646 - AluY SINE Alu -8 303 1 1948 169 112 21 chr10 111060642 111061053 -34528235 + L1ME LINE L1 5017 5502 -672 1241 142 9 27 chr10 111061076 111061322 -34527966 + AluJo SINE Alu 70 311 0 590 76 51 0 chr10 111061322 111061401 -34527887 + L1ME LINE L1 5483 5565 -601 * 1200 182 8 32 chr10 111061399 111061646 -34527642 + L1MB8 LINE L1 5915 6155 -23 1337 207 96 18 chr10 111063157 111063437 -34525851 + AluJb SINE Alu 1 302 0 209 200 0 0 chr10 111063733 111063768 -34525520 + (CA)n Simple_repeat Simple_repeat 2 36 0 254 329 12 0 chr10 111063877 111063962 -34525326 + L2 LINE L2 2236 2321 -993 324 293 18 7 chr10 111064068 111064193 -34525095 + MIR SINE MIR 5 130 -78 1643 184 7 14 chr10 111065759 111066053 -34523235 + AluJo SINE Alu 1 292 -20 387 332 64 96 chr10 111068349 111068662 -34520626 - L2 LINE L2 0 3272 2970 2434 97 0 0 chr10 111069730 111070039 -34519249 + AluSc SINE Alu 1 309 0 286 308 159 44 chr10 111070541 111070768 -34518520 - L2 LINE L2 -215 3057 2805 607 281 75 51 chr10 111071108 111071443 -34517845 - L1ME3A LINE L1 -297 5873 5531 400 348 98 37 chr10 111071512 111071837 -34517451 - L2 LINE L2 -665 2649 2305 2240 107 3 7 chr10 111072436 111072744 -34516544 - AluSx SINE Alu -5 307 1 2656 170 35 64 chr10 111073084 111073447 -34515841 + Charlie5 DNA MER1_type 18 390 -2234 905 190 105 20 chr10 111073447 111073647 -34515641 - MER20 DNA MER1_type 0 219 3 2656 170 35 64 chr10 111073647 111073712 -34515576 + Charlie5 DNA MER1_type 390 455 -2169 2187 122 3 0 chr10 111073712 111074023 -34515265 - AluSq SINE Alu -1 312 1 2656 170 35 64 chr10 111074023 111074185 -34515103 + Charlie5 DNA MER1_type 455 593 -2031 2103 124 0 26 chr10 111074185 111074491 -34514797 + AluSx SINE Alu 1 298 -14 2656 170 35 64 chr10 111074491 111074521 -34514767 + Charlie5 DNA MER1_type 593 622 -2002 1998 131 37 3 chr10 111074524 111074821 -34514467 - AluJb SINE Alu -5 307 1 629 155 0 0 chr10 111074822 111074925 -34514363 + L1MA2 LINE L1 6202 6304 0 345 174 288 0 chr10 111074936 111075068 -34514220 + Charlie5 DNA MER1_type 2447 2616 0 2220 120 0 7 chr10 111075509 111075810 -34513478 + AluSx SINE Alu 1 299 -13 2203 108 0 3 chr10 111075920 111076216 -34513072 + AluSx SINE Alu 1 295 -17 642 210 35 49 chr10 111076372 111076517 -34512771 + L1MC5 LINE L1 6720 6866 -1129 1634 181 27 0 chr10 111076517 111076810 -34512478 + AluJo SINE Alu 1 301 -11 2127 114 13 0 chr10 111076817 111077116 -34512172 + AluSx SINE Alu 1 303 -9 642 210 35 49 chr10 111077116 111077174 -34512114 + L1MC5 LINE L1 6872 6965 -1030 2409 87 3 0 chr10 111077175 111077474 -34511814 + AluSg SINE Alu 1 300 -10 1761 215 44 3 chr10 111077565 111077955 -34511333 - L1M4 LINE L1 -1821 4325 3920 1837 155 3 3 chr10 111078052 111078342 -34510946 - AluJo SINE Alu -22 290 1 207 0 0 0 chr10 111078400 111078423 -34510865 + (TC)n Simple_repeat Simple_repeat 2 24 0 1962 148 7 7 chr10 111078423 111078726 -34510562 - AluJb SINE Alu -9 303 1 2374 88 0 3 chr10 111079267 111079564 -34509724 + AluSg SINE Alu 1 296 -14 2326 96 10 3 chr10 111079644 111079946 -34509342 + AluSq SINE Alu 1 304 -9 2378 70 3 3 chr10 111080861 111081163 -34508125 - AluY SINE Alu -9 302 1 2625 185 19 40 chr10 111081679 111082197 -34507091 + MLT2B2 LTR ERVL 1 507 -8 2329 207 49 14 chr10 111082200 111082711 -34506577 - L1ME1 LINE L1 -48 6118 5590 2148 94 0 18 chr10 111083101 111083414 -34505874 - AluSx SINE Alu 0 308 1 199 183 0 33 chr10 111084247 111084307 -34504981 + CT-rich Low_complexity Low_complexity 3 60 0 228 329 0 40 chr10 111085174 111085250 -34504038 - L2 LINE L2 -74 3198 3126 1455 196 16 97 chr10 111085671 111085739 -34503549 + L1ME3 LINE L1 5767 5839 -323 2993 124 51 4 chr10 111085739 111086208 -34503080 + L1MB2 LINE L1 5679 6169 -2 1455 196 16 97 chr10 111086208 111086528 -34502760 + L1ME3 LINE L1 5839 6092 -70 4428 110 19 19 chr10 111086528 111087198 -34502090 + L1MA4A LINE L1 5628 6297 -6 1455 196 16 97 chr10 111087198 111087263 -34502025 + L1ME3 LINE L1 6092 6161 -1 1920 146 0 42 chr10 111087307 111087616 -34501672 - AluJo SINE Alu -16 296 1 224 364 11 0 chr10 111089021 111089109 -34500179 - MIR SINE MIR -65 143 55 * 738 222 43 16 chr10 111089108 111089293 -34499995 + L3 LINE CR1 651 840 -737 310 220 22 22 chr10 111089332 111089423 -34499865 + L1ME4a LINE L1 5980 6070 -51 2095 75 26 0 chr10 111089425 111089690 -34499598 - AluY SINE Alu -15 296 25 933 275 41 46 chr10 111092799 111093016 -34496272 - L1MEc LINE L1 -4551 1845 1629 871 165 0 0 chr10 111093016 111093143 -34496145 - FLAM_A SINE Alu -6 127 1 933 275 41 46 chr10 111093143 111093314 -34495974 - L1MEc LINE L1 -4767 1629 1459 2221 72 20 0 chr10 111093314 111093606 -34495682 - AluY SINE Alu -13 298 1 223 343 45 0 chr10 111093611 111093678 -34495610 + L2 LINE L2 3182 3251 -21 992 257 139 61 chr10 111094173 111094491 -34494797 + L1MDa LINE L1 1019 1311 -5310 450 0 0 0 chr10 111094491 111094541 -34494747 + (TCTA)n Simple_repeat Simple_repeat 1 50 0 992 257 139 61 chr10 111094541 111094699 -34494589 + L1MDa LINE L1 1311 1455 -5166 2075 102 46 3 chr10 111094699 111094982 -34494306 - AluSg SINE Alu -15 295 1 992 257 139 61 chr10 111094982 111095564 -34493724 + L1MDa LINE L1 1455 2201 -4420 410 169 13 0 chr10 111095569 111095646 -34493642 + L1MB5 LINE L1 6091 6168 -6 221 211 0 53 chr10 111098434 111098457 -34490831 + A-rich Low_complexity Low_complexity 1 24 -48 2128 129 3 0 chr10 111098457 111098759 -34490529 + AluSx SINE Alu 1 303 -9 221 211 0 53 chr10 111098759 111098811 -34490477 + A-rich Low_complexity Low_complexity 24 72 0 1021 295 91 74 chr10 111098816 111099373 -34489915 + L3 LINE CR1 847 1420 -157 2174 110 3 7 chr10 111099373 111099681 -34489607 + AluSx SINE Alu 1 307 -5 1021 295 91 74 chr10 111099681 111099838 -34489450 + L3 LINE CR1 1420 1573 -4 186 71 0 0 chr10 111099920 111099948 -34489340 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 1526 139 131 12 chr10 111099951 111100203 -34489085 - AluJo SINE Alu -30 282 1 23 0 0 0 chr10 111100322 111100345 -34488943 + AT_rich Low_complexity Low_complexity 1 23 0 826 122 0 32 chr10 111101412 111101535 -34487753 + FLAM_C SINE Alu 21 139 -4 1968 143 16 3 chr10 111101536 111101843 -34487445 + AluSx SINE Alu 1 311 -1 914 196 0 17 chr10 111102267 111102440 -34486848 + FRAM SINE Alu 1 169 -7 2387 96 0 0 chr10 111102474 111102776 -34486512 - AluSq SINE Alu -11 302 1 21 0 0 0 chr10 111102776 111102797 -34486491 + AT_rich Low_complexity Low_complexity 1 21 0 365 304 32 23 chr10 111103324 111103541 -34485747 + L1MDa LINE L1 2301 2519 -4202 1555 156 4 13 chr10 111103586 111103823 -34485465 - MER46A DNA MER2_type -1 235 1 1300 201 25 7 chr10 111103823 111104101 -34485187 + L1MB3 LINE L1 3746 4028 -2118 276 57 491 0 chr10 111104138 111104191 -34485097 - MADE1 DNA Mariner 0 80 2 988 236 87 0 chr10 111104581 111104822 -34484466 - MIR SINE MIR 0 262 1 2024 97 31 17 chr10 111104990 111105280 -34484008 + AluSq SINE Alu 1 294 -19 4548 162 39 50 chr10 111105297 111105382 -34483906 + L1MB3 LINE L1 4924 5008 -1175 802 203 0 0 chr10 111105382 111105510 -34483778 + FLAM_A SINE Alu 1 128 -5 4548 162 39 50 chr10 111105510 111106650 -34482638 + L1MB3 LINE L1 5008 6131 -52 2444 61 0 10 chr10 111106650 111106945 -34482343 + AluY SINE Alu 1 292 -19 4548 162 39 50 chr10 111106945 111106998 -34482290 + L1MB3 LINE L1 6131 6183 0 213 39 0 0 chr10 111108920 111108946 -34480342 + (TA)n Simple_repeat Simple_repeat 2 27 0 2422 97 0 0 chr10 111109954 111110262 -34479026 + AluSg SINE Alu 1 308 -2 1452 175 4 0 chr10 111110327 111110579 -34478709 + L1M3 LINE L1 5572 5824 -359 2043 122 13 16 chr10 111111056 111111360 -34477928 - AluSx SINE Alu -9 303 1 1950 153 76 3 chr10 111111360 111111701 -34477587 - L1MB3 LINE L1 -166 6017 5652 1025 126 0 0 chr10 111111779 111111914 -34477374 + AluSq/x SINE Alu 1 135 -178 2578 62 0 0 chr10 111111914 111112220 -34477068 + AluY SINE Alu 2 307 -4 1183 135 0 0 chr10 111112324 111112502 -34476786 + AluSp SINE Alu 136 313 0 2191 108 3 32 chr10 111112518 111112652 -34476636 + AluSx SINE Alu 1 137 -175 2093 85 38 20 chr10 111112652 111112945 -34476343 + AluY SINE Alu 1 298 -13 2191 108 3 32 chr10 111112945 111113126 -34476162 + AluSx SINE Alu 137 307 -5 581 293 18 7 chr10 111113376 111113557 -34475731 + MIR SINE MIR 71 252 -10 2217 61 3 44 chr10 111114139 111114471 -34474817 - AluY SINE Alu 0 320 1 1100 79 0 0 chr10 111114474 111114614 -34474674 - AluSg/x SINE Alu -15 295 156 240 226 19 0 chr10 111114709 111114762 -34474526 + MIR SINE MIR 63 116 -146 1383 154 69 8 chr10 111114775 111115021 -34474267 + AluJb SINE Alu 1 261 -51 286 308 159 44 chr10 111115384 111115611 -34473677 - L2 LINE L2 -215 3057 2805 408 253 75 76 chr10 111115929 111116151 -34473137 - L1ME3A LINE L1 -265 5897 5673 21 57 0 0 chr10 111117196 111117231 -34472057 + AT_rich Low_complexity Low_complexity 1 35 0 2299 105 0 0 chr10 111117251 111117546 -34471742 - AluSq SINE Alu -18 295 1 545 283 0 20 chr10 111117656 111117854 -34471434 + L1MC4 LINE L1 7700 7893 -149 2178 127 0 0 chr10 111117857 111118149 -34471139 + AluSx SINE Alu 1 292 -20 1760 128 10 80 chr10 111118149 111118239 -34471049 - Tigger3(Golem) DNA MER2_type -2738 291 196 1985 147 3 7 chr10 111118239 111118532 -34470756 - AluSx SINE Alu -20 292 1 1760 128 10 80 chr10 111118532 111118754 -34470534 - Tigger3(Golem) DNA MER2_type -2833 196 1 293 289 0 62 chr10 111119080 111119177 -34470111 + MIR SINE MIR 34 124 -138 2113 92 29 54 chr10 111119429 111119745 -34469543 - AluSx SINE Alu -4 308 1 1767 151 13 27 chr10 111120387 111120685 -34468603 + AluJo SINE Alu 13 306 -6 381 271 20 53 chr10 111120893 111121044 -34468244 + MIR3 SINE MIR 15 160 -48 441 0 0 0 chr10 111121046 111121095 -34468193 + (TG)n Simple_repeat Simple_repeat 2 50 0 985 189 11 22 chr10 111121115 111121295 -34467993 - MER45A DNA AcHobo 0 178 1 231 114 0 0 chr10 111121462 111121497 -34467791 + (GGGA)n Simple_repeat Simple_repeat 4 38 0 192 77 0 0 chr10 111121532 111121558 -34467730 + (CAG)n Simple_repeat Simple_repeat 1 26 0 357 245 10 69 chr10 111121596 111121698 -34467590 + MLT1F1 LTR MaLR 35 130 -437 1560 188 183 11 chr10 111121716 111122088 -34467200 + L1MD3 LINE L1 7388 7823 -172 231 36 0 0 chr10 111122106 111122134 -34467154 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 434 151 140 0 chr10 111122174 111122267 -34467021 - HY1 scRNA scRNA 0 112 7 2350 179 49 0 chr10 111122272 111122697 -34466591 - L1MB2 LINE L1 -40 6131 5686 1622 199 17 3 chr10 111122703 111122994 -34466294 - AluJb SINE Alu -17 295 1 786 121 138 0 chr10 111122994 111123110 -34466178 - AluSg SINE Alu -177 133 2 3313 206 52 24 chr10 111123130 111123479 -34465809 + L1ME1 LINE L1 5318 5656 -510 1944 173 0 0 chr10 111123479 111123785 -34465503 + AluJb SINE Alu 2 307 -5 3313 206 52 24 chr10 111123785 111124244 -34465044 + L1ME1 LINE L1 5656 6149 -17 21 0 0 0 chr10 111124779 111124800 -34464488 + AT_rich Low_complexity Low_complexity 1 21 0 304 335 43 6 chr10 111124870 111125031 -34464257 + HAL1b LINE L1 746 912 -436 1672 183 7 3 chr10 111125073 111125373 -34463915 + AluJo SINE Alu 1 301 -11 2286 76 4 0 chr10 111125373 111125649 -34463639 + AluSp SINE Alu 1 277 -36 369 0 0 0 chr10 111125651 111125692 -34463596 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 5771 234 85 24 chr10 111125697 111126099 -34463189 + L1MEc LINE L1 1967 2343 -3872 921 224 36 0 chr10 111126099 111126264 -34463024 + FAM SINE Alu 1 171 -4 5771 234 85 24 chr10 111126264 111127980 -34461308 + L1MEc LINE L1 2343 4184 -2031 23473 44 25 0 chr10 111128083 111131000 -34458288 + L1P LINE L1 1659 4648 -1498 252 301 11 21 chr10 111131852 111131945 -34457343 + 7SK RNA RNA 1 92 -101 2022 41 0 0 chr10 111132040 111132282 -34457006 - L1PA5 LINE L1 -1 6153 5912 196 39 0 0 chr10 111132577 111132603 -34456685 - MIR SINE MIR -20 242 217 230 227 25 109 chr10 111132632 111132751 -34456537 - MIR SINE MIR -125 137 29 255 211 99 0 chr10 111132851 111132922 -34456366 + MIR SINE MIR 185 262 0 32 0 0 0 chr10 111133412 111133444 -34455844 + AT_rich Low_complexity Low_complexity 1 32 0 2025 136 3 14 chr10 111134167 111134462 -34454826 + AluSx SINE Alu 1 292 -20 2596 57 3 0 chr10 111135197 111135495 -34453793 - AluSp SINE Alu -14 299 1 483 181 26 0 chr10 111135498 111135614 -34453674 + CT-rich Low_complexity Low_complexity 2 120 0 524 194 124 0 chr10 111135623 111135752 -34453536 + MIR SINE MIR 116 260 -2 2313 106 0 0 chr10 111135752 111136054 -34453234 - AluSp SINE Alu -11 302 1 392 283 51 0 chr10 111136055 111136193 -34453095 - L1ME3 LINE L1 -283 5879 5735 858 291 173 3 chr10 111136276 111136658 -34452630 + L2 LINE L2 2867 3313 0 1011 170 32 0 chr10 111136717 111136905 -34452383 - AluSg/x SINE Alu -10 302 109 352 301 56 19 chr10 111137348 111137561 -34451727 + L2 LINE L2 2841 3061 -211 258 306 42 0 chr10 111137611 111137683 -34451605 + MIR SINE MIR 15 89 -173 1057 210 201 54 chr10 111137683 111138017 -34451271 + MLT1F LTR MaLR 1 383 -159 867 171 27 0 chr10 111138169 111138315 -34450973 + MLT1F LTR MaLR 418 567 0 356 331 8 0 chr10 111138325 111138452 -34450836 + MIR SINE MIR 19 146 -116 2311 111 3 3 chr10 111138799 111139105 -34450183 + AluSx SINE Alu 1 306 -6 743 191 0 8 chr10 111139412 111139543 -34449745 + FLAM_A SINE Alu 1 130 -3 2337 113 0 0 chr10 111139598 111139909 -34449379 + AluSx SINE Alu 1 311 -1 2216 78 41 3 chr10 111140335 111140630 -34448658 - AluYa5 SINE Alu -5 306 1 2160 98 28 0 chr10 111141554 111141840 -34447448 - AluSx SINE Alu -18 294 1 23 0 0 0 chr10 111142547 111142570 -34446718 + AT_rich Low_complexity Low_complexity 1 23 0 2292 92 10 3 chr10 111142657 111142952 -34446336 - AluY SINE Alu -14 297 1 2059 127 0 25 chr10 111143149 111143465 -34445823 + AluSx SINE Alu 1 308 -4 2169 100 4 0 chr10 111144915 111145216 -34444072 + AluSx SINE Alu 2 303 0 623 180 8 8 chr10 111146069 111146191 -34443097 - L2 LINE L2 -2 3311 3190 29 0 0 0 chr10 111146814 111146843 -34442445 + AT_rich Low_complexity Low_complexity 1 29 0 2207 110 0 10 chr10 111147142 111147443 -34441845 + AluSx SINE Alu 1 298 -14 2428 71 3 3 chr10 111147471 111147766 -34441522 + AluSc SINE Alu 1 295 -14 21 57 0 0 chr10 111149301 111149336 -34439952 + AT_rich Low_complexity Low_complexity 1 35 0 2317 105 0 0 chr10 111149356 111149651 -34439637 - AluSq SINE Alu -18 295 1 520 283 0 20 chr10 111149761 111149959 -34439329 + L1MC4 LINE L1 7700 7893 -149 2002 144 7 0 chr10 111149962 111150247 -34439041 + AluSg SINE Alu 1 287 -23 180 0 0 0 chr10 111150250 111150270 -34439018 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 1330 153 7 69 chr10 111150488 111150636 -34438652 + L1MB3 LINE L1 5914 6070 -113 1926 140 0 38 chr10 111150636 111150950 -34438338 + AluJb SINE Alu 1 302 -10 1330 153 7 69 chr10 111150950 111150976 -34438312 + L1MB3 LINE L1 6070 6096 -87 2249 120 0 0 chr10 111150976 111151276 -34438012 - AluSx SINE Alu -12 300 1 1330 153 7 69 chr10 111151276 111151388 -34437900 + L1MB3 LINE L1 6096 6183 0 2106 111 0 0 chr10 111152838 111153118 -34436170 + AluSx SINE Alu 1 280 -32 387 0 0 0 chr10 111153120 111153163 -34436125 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 2168 57 4 0 chr10 111153360 111153622 -34435666 + AluY SINE Alu 36 298 -13 206 267 33 22 chr10 111153652 111153742 -34435546 - L2 LINE L2 -209 3063 2973 742 179 0 0 chr10 111153753 111153876 -34435412 + FLAM_C SINE Alu 6 128 -15 273 57 0 0 chr10 111154033 111154068 -34435220 + (T)n Simple_repeat Simple_repeat 1 35 0 187 205 26 0 chr10 111154574 111154613 -34434675 + L2 LINE L2 3143 3182 -90 1825 154 7 0 chr10 111154759 111155038 -34434250 + AluJo SINE Alu 1 281 -31 2212 120 0 0 chr10 111155783 111156091 -34433197 - AluSx SINE Alu 0 312 5 2081 135 13 13 chr10 111156098 111156410 -34432878 - AluSx SINE Alu 0 312 1 2103 130 3 0 chr10 111156410 111156702 -34432586 - AluSx SINE Alu -11 301 9 2244 61 3 44 chr10 111156793 111157125 -34432163 - AluY SINE Alu 0 320 1 1110 79 0 0 chr10 111157128 111157268 -34432020 - AluSg/x SINE Alu -15 295 156 221 226 19 0 chr10 111157363 111157416 -34431872 + MIR SINE MIR 63 116 -146 1840 124 95 4 chr10 111157429 111157703 -34431585 + AluJb SINE Alu 1 299 -13 2388 87 0 0 chr10 111157721 111158021 -34431267 - AluSx SINE Alu -7 305 6 2059 130 10 3 chr10 111158561 111158861 -34430427 + AluSx SINE Alu 1 302 -10 225 271 132 83 chr10 111159209 111159250 -34430038 - MER5A DNA MER1_type -1 188 150 1413 148 9 0 chr10 111159250 111159467 -34429821 - MER20 DNA MER1_type 0 219 1 225 271 132 83 chr10 111159467 111159498 -34429790 - MER5A DNA MER1_type -39 150 122 1968 146 3 7 chr10 111159498 111159799 -34429489 + AluJb SINE Alu 1 300 -12 225 271 132 83 chr10 111159799 111159869 -34429419 - MER5A DNA MER1_type -67 122 38 347 216 27 0 chr10 111160522 111160596 -34428692 + MIR SINE MIR 1 76 -186 2238 98 16 10 chr10 111160606 111160913 -34428375 - AluSp SINE Alu -4 309 1 459 195 25 0 chr10 111160915 111161033 -34428255 + CT-rich Low_complexity Low_complexity 2 122 0 524 194 124 0 chr10 111161042 111161171 -34428117 + MIR SINE MIR 116 260 -2 2337 103 0 0 chr10 111161171 111161473 -34427815 - AluSp SINE Alu -11 302 1 392 283 51 0 chr10 111161474 111161612 -34427676 - L1ME3 LINE L1 -283 5879 5735 858 291 173 3 chr10 111161695 111162077 -34427211 + L2 LINE L2 2867 3313 0 1921 136 20 0 chr10 111162136 111162430 -34426858 - AluSx SINE Alu -10 302 3 251 217 17 17 chr10 111162442 111162502 -34426786 + CT-rich Low_complexity Low_complexity 2 61 0 1894 149 31 3 chr10 111162622 111162911 -34426377 + AluJb SINE Alu 1 297 -15 2307 62 65 3 chr10 111162911 111163202 -34426086 + AluY SINE Alu 1 309 -2 1211 134 0 0 chr10 111163202 111163366 -34425922 + AluSg/x SINE Alu 134 297 -15 281 317 92 14 chr10 111163907 111164049 -34425239 - MIR3 SINE MIR -26 182 30 2313 98 3 0 chr10 111164198 111164495 -34424793 - AluSp SINE Alu -15 298 1 2234 109 6 16 chr10 111165338 111165650 -34423638 + AluSg SINE Alu 1 309 -1 508 29 29 0 chr10 111166170 111166240 -34423048 + (TA)n Simple_repeat Simple_repeat 1 72 0 1695 166 17 7 chr10 111166872 111167168 -34422120 - L1MC1 LINE L1 -9 6324 6026 2334 99 0 0 chr10 111167870 111168162 -34421126 + AluSg SINE Alu 1 292 -18 2105 136 10 7 chr10 111168272 111168574 -34420714 + AluJb SINE Alu 1 303 -9 259 315 31 16 chr10 111168577 111168704 -34420584 - MIR SINE MIR -12 250 122 2611 66 0 0 chr10 111168919 111169223 -34420065 + AluY SINE Alu 1 304 -7 1391 182 22 71 chr10 111169423 111169747 -34419541 + AluJo SINE Alu 1 308 -4 2053 148 0 7 chr10 111169829 111170139 -34419149 + AluSx SINE Alu 1 308 -4 1868 117 0 78 chr10 111170238 111170426 -34418862 - AluSx SINE Alu 0 305 104 6780 60 13 20 chr10 111170426 111171933 -34417355 - SVA Other Other -839 1386 7 1920 101 38 21 chr10 111171937 111172224 -34417064 - AluY SINE Alu -19 292 1 1868 117 0 78 chr10 111172224 111172358 -34416930 - AluSx SINE Alu -204 101 1 226 26 79 0 chr10 111172358 111172396 -34416892 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 1142 118 0 0 chr10 111172399 111172552 -34416736 - AluSp SINE Alu -25 288 136 2536 75 0 0 chr10 111172651 111172958 -34416330 - AluY SINE Alu -4 307 1 2422 67 7 3 chr10 111173595 111173893 -34415395 + AluY SINE Alu 1 299 -12 2327 88 3 0 chr10 111174614 111174899 -34414389 + AluSx SINE Alu 2 287 -25 273 261 46 0 chr10 111174976 111175041 -34414247 - L2 LINE L2 -4 3268 3201 2307 85 3 0 chr10 111175274 111175567 -34413721 + AluY SINE Alu 1 294 -17 268 187 173 0 chr10 111175643 111175718 -34413570 + MIR SINE MIR 91 178 -84 613 269 30 35 chr10 111175938 111176135 -34413153 - MIR SINE MIR -1 261 66 22 0 0 0 chr10 111176201 111176223 -34413065 + AT_rich Low_complexity Low_complexity 1 22 0 1967 118 7 21 chr10 111176228 111176552 -34412736 + AluSg SINE Alu 1 320 0 2227 94 3 3 chr10 111176578 111176885 -34412403 - AluSq SINE Alu 0 307 1 2034 156 3 0 chr10 111177091 111177399 -34411889 + AluJb SINE Alu 1 309 -3 3719 142 23 48 chr10 111178074 111178137 -34411151 - L1MB7 LINE L1 0 6184 6121 1884 163 0 10 chr10 111178137 111178443 -34410845 + AluJb SINE Alu 1 303 -9 3719 142 23 48 chr10 111178443 111178906 -34410382 - L1MB7 LINE L1 -63 6121 5677 703 179 0 8 chr10 111178906 111179046 -34410242 - FLAM_C SINE Alu 0 139 1 3719 142 23 48 chr10 111179046 111179243 -34410045 - L1MB7 LINE L1 -507 5677 5477 515 189 61 0 chr10 111179244 111179376 -34409912 - L1MB7 LINE L1 -778 5368 5229 32 43 0 0 chr10 111179491 111179537 -34409751 + AT_rich Low_complexity Low_complexity 1 46 0 315 350 41 23 chr10 111179609 111179829 -34409459 + L2 LINE L2 2193 2416 -898 2408 99 0 0 chr10 111180011 111180315 -34408973 - AluSx SINE Alu -8 304 1 400 200 35 12 chr10 111180316 111180401 -34408887 - L2 LINE L2 0 3272 3186 205 322 53 67 chr10 111180426 111180783 -34408505 + L2 LINE L2 2626 2977 -337 260 300 93 50 chr10 111180902 111181042 -34408246 + L2 LINE L2 3126 3271 -1 1466 175 29 21 chr10 111181368 111181648 -34407640 + AluJo SINE Alu 2 283 -29 298 0 0 0 chr10 111181648 111181681 -34407607 + (GAAAA)n Simple_repeat Simple_repeat 2 170 0 1790 86 0 125 chr10 111182476 111182812 -34406476 - AluSc SINE Alu -13 296 3 1962 145 0 7 chr10 111182831 111183141 -34406147 - AluSg SINE Alu 0 310 3 1906 95 8 0 chr10 111184107 111184370 -34404918 - AluSp SINE Alu -14 299 35 219 298 43 32 chr10 111184405 111184499 -34404789 - MIR SINE MIR -55 207 113 1039 219 39 16 chr10 111184500 111184791 -34404497 - LTR45B LTR ERV1 0 783 197 1303 45 0 0 chr10 111184891 111185048 -34404240 - AluY SINE Alu -36 275 119 222 236 0 18 chr10 111185057 111185112 -34404176 + MER5B DNA MER1_type 125 178 0 3896 110 45 138 chr10 111185151 111185387 -34403901 - Tigger3(Golem) DNA MER2_type -2 3027 2771 1649 161 7 45 chr10 111185387 111185531 -34403757 + AluJo SINE Alu 1 149 -163 2373 68 3 0 chr10 111185531 111185827 -34403461 + AluY SINE Alu 1 297 -14 1649 161 7 45 chr10 111185827 111185992 -34403296 + AluJo SINE Alu 149 298 -14 1649 160 3 14 chr10 111185997 111186291 -34402997 + AluJo SINE Alu 1 291 -21 3896 110 45 138 chr10 111186291 111186510 -34402778 - Tigger3(Golem) DNA MER2_type -262 2767 2529 1914 108 26 42 chr10 111186510 111186673 -34402615 - AluSx SINE Alu -11 301 144 2338 42 13 32 chr10 111186673 111186983 -34402305 - AluY SINE Alu -7 304 1 1914 108 26 42 chr10 111186983 111187125 -34402163 - AluSx SINE Alu -168 144 1 3896 110 45 138 chr10 111187125 111187335 -34401953 - Tigger3(Golem) DNA MER2_type -500 2529 2301 446 103 0 44 chr10 111187335 111187403 -34401885 - AluS SINE Alu -211 101 37 3896 110 45 138 chr10 111187403 111187434 -34401854 - Tigger3(Golem) DNA MER2_type -728 2301 2269 2411 54 0 3 chr10 111187434 111187732 -34401556 - AluY SINE Alu -14 297 1 3896 110 45 138 chr10 111187732 111188029 -34401259 - Tigger3(Golem) DNA MER2_type -760 2269 1946 2083 127 0 0 chr10 111188029 111188321 -34400967 + AluSx SINE Alu 1 292 -20 3896 110 45 138 chr10 111188321 111188411 -34400877 - Tigger3(Golem) DNA MER2_type -1083 1946 1849 1905 143 3 7 chr10 111188411 111188704 -34400584 - AluSx SINE Alu -20 292 1 3896 110 45 138 chr10 111188704 111188926 -34400362 - Tigger3(Golem) DNA MER2_type -1180 1849 1 187 298 155 0 chr10 111190305 111190389 -34398899 - MIR SINE MIR -123 139 43 367 278 33 0 chr10 111190920 111191010 -34398278 - MIR SINE MIR -7 255 163 1151 172 38 14 chr10 111191018 111191227 -34398061 + MER46A DNA MER2_type 1 214 -22 1860 148 0 3 chr10 111191243 111191526 -34397762 - AluJb SINE Alu -30 282 1 239 256 89 40 chr10 111191528 111191646 -34397642 - MIR SINE MIR -31 177 52 2362 77 3 0 chr10 111191688 111191986 -34397302 + AluSp SINE Alu 1 299 -14 207 0 0 0 chr10 111195932 111195955 -34393333 + (TTAA)n Simple_repeat Simple_repeat 3 25 0 191 220 136 34 chr10 111197978 111198037 -34391251 - L3 LINE CR1 -613 964 900 2215 82 0 41 chr10 111198513 111198869 -34390419 + AluY SINE Alu 1 343 0 2174 78 0 44 chr10 111199521 111199841 -34389447 - AluY SINE Alu -5 306 1 21 0 0 0 chr10 111200025 111200046 -34389242 + AT_rich Low_complexity Low_complexity 1 21 0 2068 109 16 3 chr10 111200190 111200494 -34388794 - AluSc SINE Alu -1 308 1 711 187 8 0 chr10 111200522 111200645 -34388643 + FLAM_A SINE Alu 4 127 -6 269 242 171 19 chr10 111201209 111201322 -34387966 - MIR SINE MIR -65 143 45 * 461 214 102 0 chr10 111201320 111201418 -34387870 + L2 LINE L2 3206 3313 0 1978 123 6 41 chr10 111201975 111202155 -34387133 - AluSx SINE Alu -7 305 139 2121 96 23 0 chr10 111202155 111202456 -34386832 - AluY SINE Alu -3 308 1 1978 123 6 41 chr10 111202456 111202591 -34386697 - AluSx SINE Alu -173 139 1 2048 112 7 3 chr10 111203917 111204212 -34385076 + AluSx SINE Alu 1 296 -16 2184 101 0 0 chr10 111204485 111204782 -34384506 + AluSg SINE Alu 1 297 -13 2033 113 0 0 chr10 111205090 111205416 -34383872 + AluSq SINE Alu 1 326 0 1820 88 92 0 chr10 111205416 111205719 -34383569 + AluSp SINE Alu 1 313 0 248 284 71 39 chr10 111206786 111206913 -34382375 + L1MC/D LINE L1 5610 5740 -2068 938 149 23 17 chr10 111206991 111207166 -34382122 - AluJb SINE Alu 0 312 137 2261 87 3 3 chr10 111207175 111207484 -34381804 - AluSx SINE Alu -3 309 1 2229 79 0 0 chr10 111207620 111207910 -34381378 + AluSx SINE Alu 7 296 -16 5700 129 67 24 chr10 111207924 111208889 -34380399 + LTR13 LTR ERVK 1 1007 0 2525 37 0 0 chr10 111209022 111209321 -34379967 + AluY SINE Alu 1 299 -12 1930 135 10 0 chr10 111209455 111209743 -34379545 - AluSx SINE Alu -19 293 3 1256 160 118 4 chr10 111209831 111210091 -34379197 + AluJb SINE Alu 18 304 0 584 238 52 23 chr10 111210475 111210647 -34378641 + MIR SINE MIR 13 189 -73 1267 95 0 0 chr10 111210781 111210950 -34378338 - AluY SINE Alu 0 311 143 2055 103 3 20 chr10 111211071 111211371 -34377917 + AluSx SINE Alu 1 295 -17 188 290 0 14 chr10 111211488 111211557 -34377731 - L2 LINE L2 -849 2465 2398 780 302 53 8 chr10 111211571 111211816 -34377472 + MIR SINE MIR 6 261 -1 834 132 0 23 chr10 111212274 111212403 -34376885 + FLAM_C SINE Alu 1 126 -17 235 246 77 0 chr10 111212654 111212719 -34376569 - MIR3 SINE MIR -54 154 85 2171 97 0 7 chr10 111213357 111213655 -34375633 - AluSx SINE Alu -16 296 1 211 318 8 31 chr10 111214267 111214396 -34374892 + GA-rich Low_complexity Low_complexity 2 127 0 1633 134 12 101 chr10 111214753 111214918 -34374370 + AluJb SINE Alu 1 125 -177 2190 68 0 0 chr10 111214918 111215225 -34374063 + AluSx SINE Alu 5 311 0 1633 134 12 101 chr10 111215225 111215386 -34373902 + AluJb SINE Alu 125 299 -3 2321 34 7 20 chr10 111215386 111215684 -34373604 + AluY SINE Alu 1 294 -17 2383 61 3 10 chr10 111215691 111216003 -34373285 + AluY SINE Alu 1 310 -1 721 182 8 15 chr10 111216296 111216428 -34372860 - AluJb SINE Alu -180 132 2 1923 131 3 3 chr10 111216434 111216732 -34372556 - AluJb SINE Alu 0 312 15 2251 89 0 3 chr10 111217405 111217707 -34371581 + AluSq SINE Alu 1 301 -12 2307 65 0 3 chr10 111217770 111218060 -34371228 - AluY SINE Alu -12 299 11 1825 169 0 0 chr10 111218065 111218367 -34370921 - AluJb SINE Alu -10 302 1 216 0 0 0 chr10 111218669 111218693 -34370595 + (A)n Simple_repeat Simple_repeat 1 24 0 1659 195 7 0 chr10 111218693 111219001 -34370287 + AluJo SINE Alu 1 310 -2 260 277 43 32 chr10 111219084 111219178 -34370110 - MIR SINE MIR -55 207 113 2611 153 26 8 chr10 111219179 111219642 -34369646 - LTR45B LTR ERV1 0 603 23 1725 139 36 0 chr10 111219654 111219934 -34369354 + AluJb SINE Alu 5 294 -18 2259 90 7 3 chr10 111219937 111220247 -34369041 + AluY SINE Alu 1 311 0 230 118 0 0 chr10 111220261 111220295 -34368993 - LTR45B LTR ERV1 -455 34 1 275 228 0 0 chr10 111220295 111220352 -34368936 - MIR SINE MIR -149 113 57 2275 87 7 0 chr10 111220610 111220910 -34368378 + AluSp SINE Alu 1 302 -11 254 297 125 39 chr10 111221012 111221140 -34368148 + MIR SINE MIR 53 191 -71 1503 194 42 89 chr10 111221684 111221991 -34367297 - MLT1C LTR MaLR -8 459 163 2054 122 0 22 chr10 111221991 111222127 -34367161 + AluSx SINE Alu 1 138 -174 2000 100 7 27 chr10 111222127 111222427 -34366861 + AluSc SINE Alu 1 294 -15 2054 122 0 22 chr10 111222427 111222609 -34366679 + AluSx SINE Alu 138 312 0 1503 194 42 89 chr10 111222609 111222752 -34366536 - MLT1C LTR MaLR -304 163 15 696 111 162 26 chr10 111222923 111223040 -34366248 + FLAM_C SINE Alu 1 133 0 198 0 0 0 chr10 111223243 111223265 -34366023 + (TG)n Simple_repeat Simple_repeat 1 22 0 899 121 43 0 chr10 111223265 111223405 -34365883 - AluSg/x SINE Alu -30 280 135 243 0 0 0 chr10 111223415 111223442 -34365846 + (T)n Simple_repeat Simple_repeat 1 27 0 183 80 0 0 chr10 111223702 111223727 -34365561 + (TCCCC)n Simple_repeat Simple_repeat 1 25 0 1875 148 13 7 chr10 111223727 111224025 -34365263 - AluJb SINE Alu -8 304 5 2217 84 0 0 chr10 111224525 111224838 -34364450 - AluSx SINE Alu 0 313 1 1949 108 7 20 chr10 111225261 111225558 -34363730 + AluSc SINE Alu 1 293 -16 2203 93 7 3 chr10 111225562 111225864 -34363424 + AluSx SINE Alu 1 303 -9 797 145 46 46 chr10 111226085 111226102 -34363186 - AluJo/FRAM SINE Alu -2 310 294 2036 126 3 0 chr10 111226102 111226411 -34362877 - AluSg SINE Alu 0 310 1 797 145 46 46 chr10 111226411 111226545 -34362743 - AluJo/FRAM SINE Alu -17 295 159 252 143 0 0 chr10 111226926 111226968 -34362320 + (TCCC)n Simple_repeat Simple_repeat 3 44 0 1619 150 22 7 chr10 111226973 111227246 -34362042 - AluJb SINE Alu -32 280 4 2341 65 3 0 chr10 111227353 111227647 -34361641 - AluY SINE Alu -16 295 1 243 0 0 0 chr10 111229708 111229735 -34359553 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 1712 149 22 4 chr10 111229735 111230010 -34359278 - AluJb SINE Alu -32 280 1 323 266 79 36 chr10 111230430 111230454 -34358834 - L2 LINE L2 -1 3312 3290 2109 98 3 0 chr10 111230454 111230763 -34358525 + AluSp SINE Alu 1 310 0 323 266 79 36 chr10 111230763 111230876 -34358412 - L2 LINE L2 -23 3290 3168 2148 94 19 19 chr10 111231093 111231402 -34357886 + AluSg SINE Alu 1 309 -1 2113 88 26 7 chr10 111231402 111231528 -34357760 + AluY SINE Alu 1 123 -188 216 0 0 0 chr10 111231528 111231552 -34357736 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 2113 88 26 7 chr10 111231552 111231730 -34357558 + AluY SINE Alu 123 311 0 1138 186 104 43 chr10 111232032 111232312 -34356976 + AluJo SINE Alu 2 298 -4 2212 95 14 0 chr10 111232312 111232608 -34356680 + AluSp SINE Alu 1 300 -13 207 0 0 0 chr10 111232614 111232637 -34356651 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 529 303 61 5 chr10 111234178 111234376 -34354912 + MIR SINE MIR 51 259 -3 389 244 146 0 chr10 111237435 111237558 -34351730 - L2 LINE L2 0 3313 3173 900 135 0 0 chr10 111237559 111237692 -34351596 + FLAM_C SINE Alu 1 133 -10 279 133 0 0 chr10 111237695 111237740 -34351548 + (GAAA)n Simple_repeat Simple_repeat 4 48 0 623 236 0 7 chr10 111237784 111237924 -34351364 - MIR SINE MIR -119 143 5 193 29 29 29 chr10 111238461 111238496 -34350792 + (TTTTTA)n Simple_repeat Simple_repeat 1 35 0 1909 117 4 4 chr10 111238564 111238845 -34350443 - AluSc SINE Alu -28 281 1 1787 155 0 26 chr10 111238847 111239151 -34350137 - AluSx SINE Alu -16 296 1 1064 174 0 6 chr10 111239560 111239732 -34349556 + FAM SINE Alu 1 171 -4 280 222 22 22 chr10 111239734 111239824 -34349464 - LTR67 LTR ERVL -30 527 438 2050 117 3 3 chr10 111239892 111240191 -34349097 - AluSx SINE Alu -13 299 1 2214 113 3 0 chr10 111240406 111240717 -34348571 + AluSp SINE Alu 1 312 -1 2268 102 0 3 chr10 111240732 111241045 -34348243 - AluSx SINE Alu 0 312 1 1915 108 34 34 chr10 111241195 111241492 -34347796 - AluSx SINE Alu -11 301 5 1216 127 11 0 chr10 111241505 111241694 -34347594 - AluY SINE Alu -2 309 119 1806 60 9 0 chr10 111241794 111242027 -34347261 + AluY SINE Alu 77 311 0 270 123 31 0 chr10 111242036 111242101 -34347187 + L1MB8 LINE L1 5761 5827 -351 452 139 0 0 chr10 111242120 111242192 -34347096 + FLAM_A SINE Alu 70 141 -1 1354 190 74 7 chr10 111242192 111242476 -34346812 + L1MB8 LINE L1 5819 6121 -57 1376 182 52 7 chr10 111242476 111242767 -34346521 - AluJb SINE Alu -8 304 1 1972 120 0 51 chr10 111242776 111242946 -34346342 - AluSx SINE Alu -12 300 152 2316 53 11 0 chr10 111242946 111243231 -34346057 - AluY SINE Alu -23 288 1 1972 120 0 51 chr10 111243231 111243376 -34345912 - AluSx SINE Alu -160 152 1 1007 146 23 0 chr10 111243380 111243551 -34345737 - AluSg/x SINE Alu -4 308 134 2028 136 0 3 chr10 111243551 111243860 -34345428 - AluSx SINE Alu -4 308 1 539 181 0 128 chr10 111243935 111244001 -34345287 - FLAM_A SINE Alu -169 133 95 2347 70 7 3 chr10 111244001 111244303 -34344985 - AluY SINE Alu -8 303 1 539 181 0 128 chr10 111244303 111244385 -34344903 - FLAM_A SINE Alu -207 95 4 303 291 93 84 chr10 111244450 111244721 -34344567 - L1M4 LINE L1 -2701 3445 3169 1976 90 19 62 chr10 111244721 111245043 -34344245 - AluSx SINE Alu -2 310 3 303 291 93 84 chr10 111245043 111245114 -34344174 - L1M4 LINE L1 -2977 3169 3100 34 0 0 0 chr10 111245195 111245229 -34344059 + AT_rich Low_complexity Low_complexity 1 34 0 755 73 0 0 chr10 111245307 111245403 -34343885 - AluS SINE Alu -216 97 2 363 164 0 0 chr10 111245502 111245569 -34343719 + MIR SINE MIR 73 139 -123 831 215 12 0 chr10 111245582 111245754 -34343534 + FRAM SINE Alu 1 173 -3 2341 77 0 10 chr10 111245768 111246080 -34343208 + AluY SINE Alu 1 309 -2 26 30 0 0 chr10 111246080 111246113 -34343175 + AT_rich Low_complexity Low_complexity 1 33 0 333 200 38 50 chr10 111246120 111246200 -34343088 - MER2 DNA MER2_type -1 344 266 1568 116 29 0 chr10 111246246 111246488 -34342800 - MER2 DNA MER2_type -75 270 22 2373 77 0 0 chr10 111246517 111246827 -34342461 - AluSg SINE Alu 0 310 1 2000 99 51 7 chr10 111246839 111247131 -34342157 - AluSg SINE Alu -5 305 1 2417 80 0 0 chr10 111247297 111247608 -34341680 - AluY SINE Alu 0 311 1 2136 83 31 3 chr10 111247608 111247897 -34341391 - AluSx SINE Alu -13 299 3 1964 136 3 17 chr10 111247899 111248200 -34341088 - AluSx SINE Alu -15 297 1 293 347 50 80 chr10 111248243 111248418 -34340870 + L2 LINE L2 2946 3125 -147 1823 153 0 26 chr10 111248418 111248726 -34340562 + AluJb SINE Alu 1 300 -12 293 347 50 80 chr10 111248726 111248757 -34340531 + L2 LINE L2 3125 3155 -117 2042 125 10 0 chr10 111248757 111249062 -34340226 - AluSx SINE Alu -4 308 1 293 347 50 80 chr10 111249062 111249191 -34340097 + L2 LINE L2 3155 3272 0 384 272 117 14 chr10 111249324 111249620 -34339668 + L1ME2 LINE L1 5632 5956 -212 1355 88 0 16 chr10 111249646 111249692 -34339596 - AluSq SINE Alu -134 179 134 2331 81 0 7 chr10 111249692 111250002 -34339286 - AluY SINE Alu -3 308 1 1355 88 0 16 chr10 111250002 111250137 -34339151 - AluSq SINE Alu -179 134 1 865 181 0 0 chr10 111250227 111250371 -34338917 + FAM SINE Alu 20 163 -22 2493 62 0 0 chr10 111250484 111250790 -34338498 - AluY SINE Alu -5 306 1 1964 142 0 16 chr10 111250798 111251107 -34338181 - AluSx SINE Alu -8 304 1 770 189 0 49 chr10 111251688 111251831 -34337457 - FAM SINE Alu -32 153 18 1816 145 7 11 chr10 111251927 111252210 -34337078 - AluSx SINE Alu -27 285 4 207 0 0 0 chr10 111252212 111252235 -34337053 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1052 182 9 67 chr10 111252235 111252411 -34336877 - AluJb SINE Alu -29 283 121 1941 155 0 0 chr10 111252411 111252707 -34336581 + AluSx SINE Alu 1 296 -16 1052 182 9 67 chr10 111252707 111252755 -34336533 - AluJb SINE Alu -191 121 72 1029 163 35 35 chr10 111252755 111252958 -34336330 + AluSg/x SINE Alu 95 297 -13 236 189 0 38 chr10 111253203 111253256 -34336032 + (CATATA)n Simple_repeat Simple_repeat 6 56 0 357 287 11 0 chr10 111253774 111253868 -34335420 + L2 LINE L2 3219 3313 0 210 208 0 0 chr10 111253878 111253931 -34335357 + (CATATA)n Simple_repeat Simple_repeat 6 58 0 1862 139 0 52 chr10 111254557 111254867 -34334421 + AluSx SINE Alu 1 294 -18 441 0 0 0 chr10 111255420 111255469 -34333819 + (A)n Simple_repeat Simple_repeat 1 49 0 32 43 0 0 chr10 111256443 111256489 -34332799 + AT_rich Low_complexity Low_complexity 1 46 0 208 284 193 0 chr10 111259181 111259269 -34330019 + L2 LINE L2 3199 3303 -10 1725 153 3 30 chr10 111260445 111260746 -34328542 + AluJo SINE Alu 1 293 -19 514 262 98 31 chr10 111261042 111261267 -34328021 - MIR SINE MIR -3 259 20 22 0 0 0 chr10 111263469 111263491 -34325797 + GC_rich Low_complexity Low_complexity 1 22 0 39 38 0 0 chr10 111263520 111263573 -34325715 + GC_rich Low_complexity Low_complexity 1 53 0 216 253 0 27 chr10 111263616 111263691 -34325597 + CT-rich Low_complexity Low_complexity 1 73 0 248 206 44 0 chr10 111263814 111263882 -34325406 + CT-rich Low_complexity Low_complexity 3 73 0 211 156 0 44 chr10 111263947 111263992 -34325296 + GA-rich Low_complexity Low_complexity 2 44 0 273 29 0 0 chr10 111264798 111264832 -34324456 + (CA)n Simple_repeat Simple_repeat 2 35 0 2192 100 3 0 chr10 111265074 111265365 -34323923 - AluSx SINE Alu -20 292 1 227 233 41 0 chr10 111266725 111266798 -34322490 + (TG)n Simple_repeat Simple_repeat 1 76 0 191 36 36 0 chr10 111266897 111266925 -34322363 + (CAGG)n Simple_repeat Simple_repeat 1 29 0 48 53 0 0 chr10 111269068 111269144 -34320144 + GC_rich Low_complexity Low_complexity 1 76 0 249 163 0 0 chr10 111269247 111269296 -34319992 + (TG)n Simple_repeat Simple_repeat 1 49 0 24 0 0 0 chr10 111269485 111269509 -34319779 + GC_rich Low_complexity Low_complexity 1 24 0 207 356 17 25 chr10 111271133 111271251 -34318037 + MIR SINE MIR 23 139 -69 464 337 25 0 chr10 111271685 111271848 -34317440 - MIR SINE MIR 0 262 96 2066 101 0 20 chr10 111272419 111272716 -34316572 - AluSx SINE Alu -21 291 1 1286 98 0 0 chr10 111272716 111272889 -34316399 - AluSp SINE Alu -7 306 134 2224 93 3 16 chr10 111272931 111273244 -34316044 - AluSg SINE Alu -1 309 1 1847 101 90 0 chr10 111273244 111273522 -34315766 - AluSx SINE Alu -9 303 1 1706 169 7 17 chr10 111273523 111273819 -34315469 - AluJo SINE Alu -11 301 9 682 165 50 0 chr10 111273832 111273953 -34315335 - FLAM_A SINE Alu -5 137 11 1101 109 6 18 chr10 111273968 111274139 -34315149 - AluSc SINE Alu 0 303 133 2196 97 3 7 chr10 111274139 111274439 -34314849 - AluSc SINE Alu -10 299 1 1101 109 6 18 chr10 111274439 111274454 -34314834 - AluSc SINE Alu -170 133 119 2345 80 6 3 chr10 111274731 111275043 -34314245 - AluSq SINE Alu 0 313 1 782 245 13 0 chr10 111275078 111275237 -34314051 + FRAM SINE Alu 2 162 -4 184 372 0 13 chr10 111275249 111275327 -34313961 + L2 LINE L2 3203 3279 -34 2219 113 0 0 chr10 111275341 111275641 -34313647 - AluSx SINE Alu -12 300 1 333 0 0 0 chr10 111275903 111275940 -34313348 + (TA)n Simple_repeat Simple_repeat 1 37 0 2163 113 3 0 chr10 111275965 111276267 -34313021 + AluSx SINE Alu 1 303 -9 315 173 0 0 chr10 111276271 111276323 -34312965 - AluSc SINE Alu -18 281 230 1751 130 0 4 chr10 111276324 111276578 -34312710 - AluSc SINE Alu -56 253 1 408 79 16 48 chr10 111276579 111276642 -34312646 - AluSq/x SINE Alu -170 143 83 1121 189 5 14 chr10 111276644 111276861 -34312427 - AluJo SINE Alu -97 215 1 988 196 70 82 chr10 111276861 111277018 -34312270 - MLT1F1 LTR MaLR -125 442 288 2158 90 0 20 chr10 111277018 111277317 -34311971 - AluSc SINE Alu -16 293 1 988 196 70 82 chr10 111277317 111277429 -34311859 - MLT1F1 LTR MaLR -279 288 176 2342 65 13 7 chr10 111277481 111277787 -34311501 - AluY SINE Alu -3 308 1 2524 39 0 7 chr10 111277795 111278104 -34311184 - AluY SINE Alu -4 307 1 2196 98 3 13 chr10 111278462 111278777 -34310511 - AluSx SINE Alu 0 312 1 2360 84 0 3 chr10 111279008 111279319 -34309969 + AluY SINE Alu 1 310 -1 2218 106 3 0 chr10 111279327 111279638 -34309650 + AluSp SINE Alu 1 312 -1 972 160 41 139 chr10 111279644 111279784 -34309504 + AluJo SINE Alu 1 90 -222 2334 73 0 13 chr10 111279784 111280086 -34309202 + AluSc SINE Alu 1 298 -11 972 160 41 139 chr10 111280086 111280283 -34309005 + AluJo SINE Alu 90 305 -7 238 291 135 64 chr10 111280330 111280537 -34308751 + L1MC/D LINE L1 5538 5778 -2030 1820 169 0 3 chr10 111280537 111280832 -34308456 - AluSx SINE Alu -18 294 1 238 291 135 64 chr10 111280832 111280950 -34308338 + L1MC/D LINE L1 5778 5886 -1922 207 250 0 0 chr10 111281307 111281351 -34307937 - L2 LINE L2 -345 2927 2884 187 323 55 55 chr10 111283881 111284008 -34305280 - L2 LINE L2 -47 3225 3099 2286 128 0 0 chr10 111284248 111284554 -34304734 - AluSx SINE Alu -6 306 1 1456 143 127 23 chr10 111285338 111285645 -34303643 + MER44D DNA MER2_type 1 609 0 1567 106 5 9 chr10 111285932 111286150 -34303138 + AluSq SINE Alu 1 217 -96 2168 99 32 0 chr10 111290990 111291273 -34298015 - AluSc SINE Alu -12 297 6 2441 78 10 0 chr10 111291284 111291591 -34297697 - AluSg SINE Alu 0 310 1 827 133 0 70 chr10 111291591 111291728 -34297560 - FLAM_A SINE Alu -6 127 1 2437 93 0 0 chr10 111292196 111292497 -34296791 + AluSg SINE Alu 1 301 -9 194 349 0 16 chr10 111292521 111292584 -34296704 - L2 LINE L2 -219 3053 2992 234 339 46 15 chr10 111292823 111292953 -34296335 - L2 LINE L2 -465 2849 2716 294 335 97 75 chr10 111293998 111294162 -34295126 - L2 LINE L2 0 3272 3113 2241 97 7 13 chr10 111294162 111294460 -34294828 + AluSx SINE Alu 1 296 -16 2451 87 0 3 chr10 111294461 111294771 -34294517 + AluY SINE Alu 2 310 -1 294 335 97 75 chr10 111294771 111295099 -34294189 - L2 LINE L2 -158 3114 2765 238 208 0 0 chr10 111297286 111297339 -34291949 + CT-rich Low_complexity Low_complexity 1 53 0 2317 91 7 3 chr10 111298328 111298625 -34290663 + AluSg SINE Alu 1 298 -12 206 295 16 0 chr10 111299371 111299432 -34289856 - MER5A DNA MER1_type 0 189 128 246 173 148 25 chr10 111299550 111299631 -34289657 + L2 LINE L2 3182 3272 0 2295 104 0 22 chr10 111299683 111300001 -34289287 - AluSx SINE Alu -1 311 1 1828 165 0 16 chr10 111300001 111300303 -34288985 - AluJb SINE Alu -14 298 1 412 230 143 65 chr10 111301948 111302165 -34287123 + MIR SINE MIR 3 236 -26 2466 86 13 0 chr10 111302547 111302850 -34286438 - AluSx SINE Alu -5 307 1 396 256 58 64 chr10 111302884 111302947 -34286341 - MIR SINE MIR -3 259 197 2255 89 6 42 chr10 111302947 111303260 -34286028 - AluSx SINE Alu -10 302 1 396 256 58 64 chr10 111303260 111303368 -34285920 - MIR SINE MIR -65 197 89 1875 123 16 55 chr10 111303398 111303706 -34285582 - AluSq SINE Alu -17 296 1 993 192 12 0 chr10 111303728 111303900 -34285388 - AluJo/FRAM SINE Alu -5 307 134 2358 64 10 14 chr10 111303900 111304195 -34285093 - AluSp SINE Alu -11 302 9 360 153 0 23 chr10 111304202 111304277 -34285011 + AluSp/q SINE Alu 238 302 -1 531 114 133 19 chr10 111304282 111304387 -34284901 - FLAM_C SINE Alu -16 117 1 2039 123 20 14 chr10 111304395 111304688 -34284600 - AluSg SINE Alu -15 295 1 2023 112 59 0 chr10 111304730 111305017 -34284271 - AluSx SINE Alu -8 304 1 676 155 0 85 chr10 111305170 111305299 -34283989 - FLAM_C SINE Alu -15 118 1 1994 119 16 33 chr10 111305307 111305610 -34283678 - AluSq SINE Alu -15 298 1 1770 106 128 28 chr10 111307690 111307972 -34281316 + AluSg SINE Alu 1 310 0 266 71 0 24 chr10 111308101 111308143 -34281145 + (CAG)n Simple_repeat Simple_repeat 2 42 0 1128 217 85 11 chr10 111308454 111308756 -34280532 - MLT1F1 LTR MaLR -229 313 1 1603 215 20 3 chr10 111310116 111310409 -34278879 - AluJb SINE Alu -14 298 1 902 202 114 10 chr10 111312932 111313125 -34276163 + MER58C DNA MER1_type 3 215 0 510 224 15 134 chr10 111313133 111313198 -34276090 + MER5B DNA MER1_type 1 72 -106 5976 39 7 9 chr10 111313198 111313934 -34275354 + L1PA5 LINE L1 5421 6154 0 510 224 15 134 chr10 111313934 111314069 -34275219 + MER5B DNA MER1_type 72 177 -1 2416 78 3 13 chr10 111314172 111314480 -34274808 + AluSx SINE Alu 1 305 -7 506 284 104 23 chr10 111314655 111315008 -34274280 - L1ME LINE L1 -299 5822 5426 1767 141 74 32 chr10 111315011 111315388 -34273900 - L1MB2 LINE L1 0 6171 5779 2166 88 0 0 chr10 111315388 111315651 -34273637 - AluSg1 SINE Alu -46 263 1 1923 158 17 3 chr10 111315657 111315954 -34273334 - AluJb SINE Alu -11 301 1 1242 100 53 215 chr10 111316232 111316595 -34272693 - AluJb SINE Alu 0 308 1 682 178 13 86 chr10 111316635 111316787 -34272501 + AluJb SINE Alu 156 296 -16 359 207 122 0 chr10 111316817 111316899 -34272389 + MIR SINE MIR 159 250 -12 973 191 38 0 chr10 111317309 111317492 -34271796 - MER20 DNA MER1_type -28 191 2 239 247 59 47 chr10 111317494 111317579 -34271709 - MIR SINE MIR -79 129 44 2471 80 10 3 chr10 111317780 111318091 -34271197 + AluSq SINE Alu 1 313 0 2316 59 0 7 chr10 111318572 111318898 -34270390 + AluY SINE Alu 1 324 0 531 134 0 37 chr10 111318898 111318971 -34270317 - AluSg SINE Alu -235 75 3 568 203 37 49 chr10 111318976 111319139 -34270149 - MLT1A2 LTR MaLR -210 164 4 2484 70 0 13 chr10 111319169 111319484 -34269804 - AluY SINE Alu 0 311 1 2408 61 3 3 chr10 111319484 111319778 -34269510 - AluY SINE Alu -17 294 1 821 156 0 30 chr10 111319779 111319914 -34269374 - AluJo/FLAM SINE Alu -169 133 3 2542 71 0 0 chr10 111319936 111320247 -34269041 - AluY SINE Alu 0 311 1 342 200 56 94 chr10 111320273 111320433 -34268855 - L1MC5 LINE L1 -44 7917 7764 892 143 17 63 chr10 111320441 111320616 -34268672 - AluJb SINE Alu -17 295 129 2549 56 0 34 chr10 111320812 111321134 -34268154 - AluY SINE Alu 0 311 1 456 91 26 26 chr10 111322106 111322183 -34267105 - Alu SINE Alu -10 302 226 2420 68 17 0 chr10 111322550 111322846 -34266442 - AluY SINE Alu -6 305 5 566 262 98 31 chr10 111324685 111324910 -34264378 + MIR SINE MIR 20 259 -3 1174 134 0 6 chr10 111325320 111325491 -34263797 + AluSq SINE Alu 121 290 -23 1119 102 60 24 chr10 111325534 111325700 -34263588 + AluSc SINE Alu 124 295 -14 833 137 0 0 chr10 111325760 111325877 -34263411 - AluJb SINE Alu -193 119 3 994 126 22 16 chr10 111326527 111326710 -34262578 - Tigger4(Zombi) DNA MER2_type 0 2731 2548 2270 99 3 3 chr10 111326750 111327043 -34262245 - AluSx SINE Alu -19 293 1 1033 265 64 51 chr10 111328126 111328311 -34260977 - LTR33 LTR ERVL -18 503 322 2104 111 3 10 chr10 111328311 111328629 -34260659 - AluSq SINE Alu 0 316 1 1033 265 64 51 chr10 111328629 111328929 -34260359 - LTR33 LTR ERVL -199 322 11 2621 53 0 0 chr10 111328974 111329274 -34260014 - AluY SINE Alu -11 300 1 230 120 20 40 chr10 111329314 111329355 -34259933 - L1MB3 LINE L1 -10 6173 6132 2403 91 0 7 chr10 111329355 111329663 -34259625 - AluY SINE Alu -5 306 1 261 58 0 127 chr10 111329678 111329733 -34259555 - L1PA2 LINE L1 0 6155 6108 * 823 218 78 0 chr10 111329731 111329924 -34259364 - L1MB4 LINE L1 -43 6137 5930 2506 81 3 3 chr10 111329924 111330233 -34259055 - AluSq SINE Alu -4 309 1 956 143 39 7 chr10 111330233 111330387 -34258901 - AluJb SINE Alu -10 302 144 2175 145 3 0 chr10 111330390 111330700 -34258588 - AluSq SINE Alu -2 311 1 367 263 96 10 chr10 111330705 111330725 -34258563 - L1M4 LINE L1 -2892 3254 3237 2433 85 0 0 chr10 111330725 111331019 -34258269 - AluSc SINE Alu -15 294 1 367 263 96 10 chr10 111331019 111331207 -34258081 - L1M4 LINE L1 -2909 3237 3028 671 73 0 27 chr10 111331212 111331322 -34257966 - L1MA4A LINE L1 0 6303 6197 383 290 91 17 chr10 111331952 111332128 -34257160 + BaEV-int LTR ERV1 182 370 -6279 557 315 5 27 chr10 111332379 111332598 -34256690 + BaEV-int LTR ERV1 790 1003 -6782 1690 294 56 41 chr10 111332777 111334123 -34255165 + BaEV-int LTR ERV1 936 2718 -4604 865 324 31 25 chr10 111334191 111334673 -34254615 + BaEV-int LTR ERV1 3172 3656 -4129 5686 144 67 100 chr10 111334756 111336078 -34253210 + pTR5 LTR ERV1 743 2021 -417 330 273 10 0 chr10 111336082 111336181 -34253107 + LTR30 LTR ERV1 544 643 -79 1501 113 0 5 chr10 111336183 111336405 -34252883 + pTR5 LTR ERV1 172 392 -2046 2315 336 27 50 chr10 111336429 111337304 -34251984 + BaEV-int LTR ERV1 2694 3587 -4198 2319 111 0 0 chr10 111337304 111337632 -34251656 + AluSq SINE Alu 1 313 0 2315 336 27 50 chr10 111337632 111338433 -34250855 + BaEV-int LTR ERV1 3587 4405 -3380 2448 80 0 3 chr10 111338433 111338733 -34250555 + AluY SINE Alu 1 299 -12 2315 336 27 50 chr10 111338733 111339149 -34250139 + BaEV-int LTR ERV1 4405 5758 -2027 328 295 18 0 chr10 111339370 111339482 -34249806 + BaEV-int LTR ERV1 4735 4848 -1801 2322 122 0 0 chr10 111339943 111340255 -34249033 + AluSx SINE Alu 1 312 0 285 75 0 0 chr10 111340263 111340303 -34248985 + (GGAA)n Simple_repeat Simple_repeat 3 42 0 1541 310 54 50 chr10 111340306 111341337 -34247951 + BaEV-int LTR ERV1 5340 6375 -274 239 349 0 0 chr10 111341481 111341547 -34247741 + C-rich Low_complexity Low_complexity 1 66 0 489 258 29 47 chr10 111341750 111341942 -34247346 + MIR SINE MIR 18 206 -56 346 277 0 0 chr10 111341983 111342066 -34247222 - L2 LINE L2 -2 3270 3188 33 43 0 0 chr10 111344093 111344140 -34245148 + AT_rich Low_complexity Low_complexity 1 47 0 21 57 0 0 chr10 111347900 111347935 -34241353 + GC_rich Low_complexity Low_complexity 1 35 0 265 282 21 69 chr10 111348337 111348525 -34240763 + CT-rich Low_complexity Low_complexity 1 179 0 224 291 17 77 chr10 111348529 111348646 -34240642 + MIR3 SINE MIR 6 115 -93 2473 73 0 3 chr10 111348997 111349297 -34239991 + AluY SINE Alu 1 299 -12 235 323 40 10 chr10 111349355 111349454 -34239834 + L2 LINE L2 2739 2840 -474 232 314 43 0 chr10 111349511 111349581 -34239707 + L2 LINE L2 2989 3061 -211 2275 108 7 0 chr10 111350198 111350527 -34238761 + AluSx SINE Alu 1 312 0 393 291 55 33 chr10 111351085 111351267 -34238021 + MIR3 SINE MIR 21 206 -2 741 253 54 102 chr10 111354847 111354970 -34234318 - MER102b DNA MER1_type -1087 341 214 1906 171 3 13 chr10 111354970 111355285 -34234003 - AluJo SINE Alu 0 312 1 741 253 54 102 chr10 111355285 111355493 -34233795 - MER102b DNA MER1_type -1214 214 26 2363 104 0 0 chr10 111356043 111356340 -34232948 - AluSg SINE Alu -13 297 1 1353 190 0 92 chr10 111356553 111356869 -34232419 - AluJb SINE Alu -21 291 5 607 179 98 0 chr10 111356875 111356998 -34232290 - FLAM_C SINE Alu -7 136 2 1324 120 0 0 chr10 111357025 111357200 -34232088 + AluSq SINE Alu 1 175 -138 1373 132 14 5 chr10 111357306 111357526 -34231762 - AluY SINE Alu -89 222 1 2476 96 0 0 chr10 111359182 111359494 -34229794 + AluSx SINE Alu 1 312 0 26 30 0 0 chr10 111359661 111359694 -34229594 + AT_rich Low_complexity Low_complexity 1 33 0 209 334 108 9 chr10 111359697 111359824 -34229464 + MIR SINE MIR 16 154 -64 2421 83 3 0 chr10 111360084 111360385 -34228903 - AluSx SINE Alu -10 302 1 233 250 158 0 chr10 111360398 111360474 -34228814 - L2 LINE L2 -1 3312 3225 21 57 0 0 chr10 111362016 111362051 -34227237 + GC_rich Low_complexity Low_complexity 1 35 0 189 74 0 0 chr10 111362086 111362113 -34227175 + (CCG)n Simple_repeat Simple_repeat 2 28 0 201 258 54 32 chr10 111362902 111362995 -34226293 + MIR SINE MIR 59 153 -55 492 231 54 15 chr10 111365235 111365365 -34223923 + MIR SINE MIR 42 176 -86 21 0 0 0 chr10 111366083 111366104 -34223184 + GC_rich Low_complexity Low_complexity 1 21 0 189 256 0 0 chr10 111367690 111367733 -34221555 - MER5A DNA MER1_type -56 133 91 2661 46 0 3 chr10 111367823 111368128 -34221160 + AluY SINE Alu 1 304 -7 201 133 0 0 chr10 111368196 111368226 -34221062 + (TGAA)n Simple_repeat Simple_repeat 4 33 0 303 333 20 27 chr10 111368245 111368425 -34220863 + MIR SINE MIR 33 209 -53 2118 110 3 60 chr10 111368611 111368928 -34220360 + AluJb SINE Alu 1 299 -13 2216 133 0 3 chr10 111368928 111369235 -34220053 + AluSx SINE Alu 1 307 -5 228 302 0 0 chr10 111369382 111369435 -34219853 + L2 LINE L2 3134 3186 -86 1956 136 7 17 chr10 111369436 111369730 -34219558 - AluSx SINE Alu -13 299 9 1051 228 10 0 chr10 111369851 111370053 -34219235 - AluSx SINE Alu -100 212 9 228 304 11 11 chr10 111370417 111370509 -34218779 + L2 LINE L2 2282 2373 -941 575 244 69 42 chr10 111370632 111370802 -34218486 + MIR SINE MIR 40 219 -43 801 146 0 29 chr10 111370802 111370939 -34218349 + FLAM_C SINE Alu 1 133 0 575 244 69 42 chr10 111370939 111370985 -34218303 + MIR SINE MIR 219 262 0 2416 87 0 3 chr10 111371009 111371321 -34217967 - AluSx SINE Alu -1 311 1 207 213 43 0 chr10 111371475 111371522 -34217766 + L2 LINE L2 2682 2730 -584 224 188 0 42 chr10 111372034 111372082 -34217206 + L2 LINE L2 3216 3261 -11 331 318 92 13 chr10 111372086 111372424 -34216864 + L1ME4a LINE L1 5332 5698 -423 207 0 0 0 chr10 111373153 111373176 -34216112 + (A)n Simple_repeat Simple_repeat 1 23 0 1818 123 0 26 chr10 111373176 111373444 -34215844 + AluSx SINE Alu 1 261 -51 1230 209 59 0 chr10 111373444 111373683 -34215605 - AluJb SINE Alu -59 253 1 812 116 20 7 chr10 111373778 111373924 -34215364 + L1MA5A LINE L1 6147 6294 -3 2205 134 0 0 chr10 111374290 111374597 -34214691 + AluSx SINE Alu 1 307 -5 2405 113 0 0 chr10 111374671 111374982 -34214306 + AluSx SINE Alu 1 311 -1 347 217 101 23 chr10 111375310 111375439 -34213849 + L1ME4a LINE L1 5795 5933 -188 281 274 0 12 chr10 111375510 111375594 -34213694 + L1ME4a LINE L1 5960 6042 -79 2423 93 3 0 chr10 111375831 111376141 -34213147 - AluY SINE Alu 0 311 1 2136 84 4 0 chr10 111376141 111376404 -34212884 + AluSp SINE Alu 24 287 -26 1479 148 4 0 chr10 111376533 111376762 -34212526 + AluSg/x SINE Alu 76 305 -5 818 138 0 0 chr10 111376762 111376878 -34212410 + AluJb SINE Alu 181 296 -16 981 128 13 0 chr10 111376878 111377034 -34212254 - MER46B DNA MER2_type -200 36 4 746 222 91 37 chr10 111377054 111377125 -34212163 - MIR SINE MIR 0 262 196 1974 98 40 14 chr10 111377125 111377401 -34211887 + AluSc SINE Alu 1 283 -26 258 105 0 0 chr10 111377401 111377439 -34211849 + (TA)n Simple_repeat Simple_repeat 2 39 0 746 222 91 37 chr10 111377439 111377609 -34211679 - MIR SINE MIR -65 197 7 1038 145 30 30 chr10 111377692 111377892 -34211396 + MER2 DNA MER2_type 2 201 -144 2251 120 0 0 chr10 111377893 111378194 -34211094 - AluSx SINE Alu -8 304 4 4489 101 63 16 chr10 111378202 111378702 -34210586 - MER4-int LTR ERV1 -1 6597 6047 2480 50 0 20 chr10 111378702 111379029 -34210259 + AluY SINE Alu 1 311 0 4489 101 63 16 chr10 111379029 111379288 -34210000 - MER4-int LTR ERV1 -551 6047 5802 397 147 0 0 chr10 111379314 111379382 -34209906 + MER4B-int LTR ERV1 3579 3646 -3112 2255 112 3 3 chr10 111379425 111379728 -34209560 - AluSx SINE Alu -9 303 1 2290 79 4 0 chr10 111379775 111380083 -34209205 - AluSg1 SINE Alu 0 309 1 2280 101 7 0 chr10 111380089 111380387 -34208901 - AluY SINE Alu -11 300 1 809 119 126 21 chr10 111380387 111380530 -34208758 - AluSg/x SINE Alu -1 309 152 5077 79 3 31 chr10 111380531 111380825 -34208463 - THE1B-int LTR MaLR -870 710 409 2532 63 3 3 chr10 111380825 111381128 -34208160 + AluY SINE Alu 1 303 -8 5077 79 3 31 chr10 111381128 111381378 -34207910 - THE1B-int LTR MaLR -1171 409 190 2277 102 10 0 chr10 111381378 111381671 -34207617 - AluSp SINE Alu -17 296 1 5077 79 3 31 chr10 111381671 111381856 -34207432 - THE1B-int LTR MaLR -1390 190 1 1931 140 48 25 chr10 111381856 111382212 -34207076 - THE1B LTR MaLR 0 364 1 1536 100 36 16 chr10 111382212 111382463 -34206825 + L1PA13 LINE L1 5907 6162 -1 2268 164 37 26 chr10 111382467 111382923 -34206365 + LOR1b LTR ERV1 1 461 0 556 138 46 0 chr10 111382924 111383011 -34206277 + LOR1b-int LTR ERV1 2 92 -8028 233 0 62 0 chr10 111383013 111383045 -34206243 + (TTTTA)n Simple_repeat Simple_repeat 3 36 0 911 132 26 33 chr10 111383047 111383127 -34206161 - AluSg/x SINE Alu -27 285 205 3019 132 53 90 chr10 111383127 111383380 -34205908 + LTR9 LTR ERV1 1 262 -350 1532 126 0 0 chr10 111383380 111383587 -34205701 + AluSq SINE Alu 107 313 0 3019 132 53 90 chr10 111383587 111383968 -34205320 + LTR9 LTR ERV1 262 612 0 911 132 26 33 chr10 111383968 111384039 -34205249 - AluSg/x SINE Alu -107 205 135 1653 171 39 13 chr10 111384052 111384361 -34204927 + LOR1b-int LTR ERV1 102 418 -7702 * 5827 128 34 1 chr10 111384329 111385305 -34203983 + MER4B-int LTR ERV1 203 1210 -6910 2827 198 93 83 chr10 111385306 111386469 -34202819 - MER52A LTR ERV1 0 1278 117 346 138 0 31 chr10 111386461 111386526 -34202762 - MER52C LTR ERV1 -990 288 226 * 920 170 0 7 chr10 111386526 111386673 -34202615 + AluSc SINE Alu 148 293 -16 2494 78 27 66 chr10 111386673 111386980 -34202308 + LOR1b-int LTR ERV1 4939 5229 -2891 2090 107 7 0 chr10 111386980 111387280 -34202008 - AluSp SINE Alu 0 302 1 2494 78 27 66 chr10 111387280 111387381 -34201907 + LOR1b-int LTR ERV1 5229 5332 -2788 2010 120 0 0 chr10 111387381 111387648 -34201640 - AluSx SINE Alu -15 297 31 2305 98 0 7 chr10 111387677 111387973 -34201315 - AluSx SINE Alu -18 294 1 861 124 15 0 chr10 111387973 111388110 -34201178 + LOR1b-int LTR ERV1 5325 5463 -2657 1584 167 0 65 chr10 111388465 111388771 -34200517 - AluJo SINE Alu -18 294 9 2321 141 41 8 chr10 111389206 111389568 -34199720 - THE1C LTR MaLR -1 374 1 561 13 39 0 chr10 111390568 111390646 -34198642 + (TAGA)n Simple_repeat Simple_repeat 3 83 0 2229 83 0 24 chr10 111390879 111391204 -34198084 - AluY SINE Alu 0 318 1 1831 105 39 6 chr10 111391204 111391496 -34197792 + LOR1b-int LTR ERV1 5486 6064 -2056 648 121 0 0 chr10 111391495 111391586 -34197702 + LOR1b-int LTR ERV1 8030 8120 0 * 2618 181 41 0 chr10 111391586 111392029 -34197259 + LOR1b LTR ERV1 1 461 0 3124 174 90 29 chr10 111392048 111392728 -34196560 + L1M2b LINE L1 1 721 -6488 1229 114 0 0 chr10 111392724 111392900 -34196388 + L1MA4A LINE L1 6019 6194 -109 * 1754 127 70 0 chr10 111393539 111393798 -34195490 + AluSx SINE Alu 1 277 -35 27 0 0 0 chr10 111393935 111393962 -34195326 + AT_rich Low_complexity Low_complexity 1 27 0 1948 157 7 0 chr10 111393965 111394264 -34195024 + AluJb SINE Alu 1 301 -11 7450 111 7 22 chr10 111394280 111394906 -34194382 - L1MA1 LINE L1 0 6302 5668 2154 107 7 3 chr10 111394906 111395196 -34194092 - AluSx SINE Alu -19 293 3 7450 111 7 22 chr10 111395196 111396064 -34193224 - L1MA1 LINE L1 -634 5668 4830 752 212 0 23 chr10 111396085 111396217 -34193071 - FLAM_C SINE Alu -2 131 3 235 274 253 0 chr10 111396218 111396313 -34192975 - L1MC/D LINE L1 -1915 5893 5775 2424 83 0 0 chr10 111396341 111396641 -34192647 + AluY SINE Alu 1 300 -11 4427 179 30 16 chr10 111396641 111397481 -34191807 + L1MB4 LINE L1 5321 6174 -6 1763 174 0 3 chr10 111397499 111397792 -34191496 + AluJb SINE Alu 1 292 -20 281 241 38 0 chr10 111397799 111397878 -34191410 - L1MC4 LINE L1 -43 7999 7918 2876 216 28 14 chr10 111397920 111398553 -34190735 + L1ME1 LINE L1 5514 6155 -11 2291 106 0 3 chr10 111398554 111398855 -34190433 + AluSp SINE Alu 3 302 -11 816 198 80 0 chr10 111398865 111399027 -34190261 + AluJb SINE Alu 138 312 0 2365 94 3 0 chr10 111399368 111399677 -34189611 + AluSq SINE Alu 1 310 -3 253 267 112 75 chr10 111400075 111400236 -34189052 - L2 LINE L2 -1 3312 3146 1938 158 0 6 chr10 111400237 111400548 -34188740 - AluJo SINE Alu -3 309 1 917 92 0 99 chr10 111400585 111400727 -34188561 + AluSq/x SINE Alu 1 128 -185 2236 98 7 0 chr10 111400750 111401046 -34188242 + AluSp SINE Alu 1 298 -15 198 0 0 0 chr10 111401052 111401074 -34188214 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 255 336 25 25 chr10 111401137 111401256 -34188032 - L2 LINE L2 -266 3006 2888 1763 167 7 20 chr10 111401259 111401552 -34187736 + AluJb SINE Alu 6 294 -18 1916 170 0 0 chr10 111401576 111401888 -34187400 - AluSx SINE Alu 0 312 1 716 290 37 43 chr10 111402061 111402215 -34187073 - L1MC/D LINE L1 -504 5658 5505 1944 144 4 0 chr10 111402215 111402492 -34186796 - AluJb SINE Alu -20 292 15 716 290 37 43 chr10 111402492 111402946 -34186342 - L1MC/D LINE L1 -657 5505 5054 866 170 0 15 chr10 111402946 111403081 -34186207 + FLAM_A SINE Alu 1 133 0 716 290 37 43 chr10 111403081 111403157 -34186131 - L1MC/D LINE L1 -1108 5054 4979 2276 112 0 0 chr10 111403739 111404034 -34185254 - AluSx SINE Alu -17 295 1 1909 143 3 3 chr10 111404653 111404939 -34184349 - AluJb SINE Alu -26 286 1 1815 131 31 17 chr10 111405214 111405505 -34183783 - AluSx SINE Alu -17 295 1 1389 137 5 0 chr10 111405534 111405738 -34183550 + AluJo SINE Alu 85 289 -23 1757 142 7 24 chr10 111406014 111406302 -34182986 - AluJo SINE Alu -24 288 6 820 145 0 0 chr10 111406471 111406588 -34182700 - FLAM_C SINE Alu -26 117 1 240 111 0 0 chr10 111406956 111406992 -34182296 + (A)n Simple_repeat Simple_repeat 1 36 0 743 194 30 0 chr10 111408359 111408493 -34180795 - MER58A DNA MER1_type -1 223 86 870 167 0 0 chr10 111408502 111408640 -34180648 - FLAM_C SINE Alu -5 138 1 2261 104 16 0 chr10 111408650 111408957 -34180331 - AluSx SINE Alu 0 312 1 238 246 31 31 chr10 111408960 111409025 -34180263 - MER58A DNA MER1_type -42 65 1 471 312 25 35 chr10 111409155 111409354 -34179934 - MIR SINE MIR -46 216 20 2236 126 0 19 chr10 111409827 111410145 -34179143 - AluSx SINE Alu 0 312 1 1514 142 0 0 chr10 111410159 111410370 -34178918 - AluSx SINE Alu -63 249 39 1318 125 24 19 chr10 111412194 111412402 -34176886 + L1MB7 LINE L1 5961 6169 -15 1531 171 14 38 chr10 111413620 111413907 -34175381 + AluJo SINE Alu 1 280 -32 273 29 0 0 chr10 111413907 111413941 -34175347 + (TGAA)n Simple_repeat Simple_repeat 3 36 0 2505 44 0 7 chr10 111414179 111414473 -34174815 + AluY SINE Alu 1 292 -19 315 257 9 86 chr10 111414604 111414709 -34174579 - L2 LINE L2 -12 3301 3205 2125 111 4 0 chr10 111415447 111415756 -34173532 + AluSx SINE Alu 2 311 0 2407 81 0 0 chr10 111418107 111418404 -34170884 - AluY SINE Alu -14 297 1 2094 82 75 0 chr10 111418404 111418672 -34170616 - AluSg SINE Alu -20 290 3 1179 219 62 136 chr10 111418685 111419085 -34170203 - L1MC4 LINE L1 0 8042 7614 1496 147 48 86 chr10 111419085 111419241 -34170047 - AluJo SINE Alu -11 301 141 203 0 0 36 chr10 111419241 111419269 -34170019 + (TTTTA)n Simple_repeat Simple_repeat 4 30 0 2343 73 0 0 chr10 111419276 111419563 -34169725 - AluY SINE Alu -24 287 1 1496 147 48 86 chr10 111419563 111419711 -34169577 - AluJo SINE Alu -177 135 1 1179 219 62 136 chr10 111419711 111419990 -34169298 - L1MC4 LINE L1 -428 7614 7316 1888 159 0 3 chr10 111419990 111420279 -34169009 - AluJb SINE Alu -24 288 1 1179 219 62 136 chr10 111420279 111420339 -34168949 - L1MC4 LINE L1 -726 7316 7253 2181 116 7 0 chr10 111420339 111420632 -34168656 - AluSx SINE Alu -17 295 1 1179 219 62 136 chr10 111420632 111421232 -34168056 - L1MC4 LINE L1 -789 7253 6812 2153 108 37 0 chr10 111421288 111421584 -34167704 + AluSg SINE Alu 1 307 -3 485 265 61 0 chr10 111421587 111421734 -34167554 - MER112 DNA MER1_type -104 156 1 470 302 17 0 chr10 111422271 111422387 -34166901 - L2 LINE L2 -9 3263 3146 2341 97 0 0 chr10 111422927 111423227 -34166061 - AluSx SINE Alu -10 302 3 845 160 153 0 chr10 111423229 111423373 -34165915 - FRAM SINE Alu -13 163 1 2308 86 0 0 chr10 111424171 111424461 -34164827 + AluSx SINE Alu 1 290 -22 2414 74 0 3 chr10 111424461 111424760 -34164528 + AluSg SINE Alu 1 298 -12 1006 221 161 44 chr10 111425108 111425180 -34164108 - L1MC4 LINE L1 0 8042 7980 282 56 0 0 chr10 111425180 111425216 -34164072 + (CA)n Simple_repeat Simple_repeat 2 37 0 195 42 0 0 chr10 111425216 111425240 -34164048 + (TATG)n Simple_repeat Simple_repeat 2 25 0 1006 221 161 44 chr10 111425240 111425259 -34164029 - L1MC4 LINE L1 -62 7980 7965 1714 197 14 0 chr10 111425259 111425549 -34163739 + AluJb SINE Alu 1 294 -18 1006 221 161 44 chr10 111425549 111425607 -34163681 - L1MC4 LINE L1 -77 7965 7915 2209 66 49 3 chr10 111425607 111425893 -34163395 - AluSx SINE Alu -13 299 1 1006 221 161 44 chr10 111425893 111426170 -34163118 - L1MC4 LINE L1 -127 7915 7563 1622 161 0 4 chr10 111426198 111426453 -34162835 + AluJo SINE Alu 10 263 -49 652 266 5 43 chr10 111426490 111426678 -34162610 - AluJo SINE Alu -15 297 117 1187 124 38 24 chr10 111426705 111426914 -34162374 - L1MA4 LINE L1 -2 6298 6087 927 240 117 38 chr10 111426932 111427249 -34162039 - L1MC4 LINE L1 -508 7534 7193 238 275 0 25 chr10 111427789 111427869 -34161419 + CT-rich Low_complexity Low_complexity 2 79 0 1550 148 35 53 chr10 111428061 111428345 -34160943 + AluJo SINE Alu 12 290 -22 207 0 0 0 chr10 111428345 111428368 -34160920 + (GA)n Simple_repeat Simple_repeat 2 24 0 60 27 0 0 chr10 111429733 111429807 -34159481 + AT_rich Low_complexity Low_complexity 1 74 0 1604 128 51 4 chr10 111429851 111430108 -34159180 - L1MC3 LINE L1 -38 7747 7479 2553 57 0 22 chr10 111430129 111430447 -34158841 - AluY SINE Alu 0 311 1 327 225 58 58 chr10 111430450 111430570 -34158718 - MIR SINE MIR -62 200 81 4441 139 27 13 chr10 111432468 111433166 -34156122 - L1MB5 LINE L1 0 6174 5467 180 179 0 0 chr10 111434408 111434447 -34154841 + T-rich Low_complexity Low_complexity 1 39 0 1507 166 146 107 chr10 111435404 111435565 -34153723 - MLT1F LTR MaLR -2 565 412 1027 120 0 0 chr10 111435565 111435698 -34153590 - AluJo SINE Alu -169 133 1 1507 166 146 107 chr10 111435698 111436096 -34153192 - MLT1F LTR MaLR -155 412 8 2940 16 0 0 chr10 111436632 111436950 -34152338 + AluYb8 SINE Alu 1 318 0 2042 146 0 10 chr10 111437021 111437322 -34151966 + AluSx SINE Alu 1 298 -14 831 178 0 0 chr10 111437644 111437773 -34151515 + FLAM_A SINE Alu 1 129 -4 1894 127 20 23 chr10 111438026 111438325 -34150963 + AluJo SINE Alu 1 298 -14 34 0 0 0 chr10 111438683 111438717 -34150571 + AT_rich Low_complexity Low_complexity 1 34 0 1761 142 17 24 chr10 111438717 111439005 -34150283 - AluJb SINE Alu -26 286 1 279 0 0 0 chr10 111439372 111439403 -34149885 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2611 62 0 0 chr10 111440086 111440390 -34148898 - AluY SINE Alu -7 304 1 22 35 0 0 chr10 111440498 111440527 -34148761 + AT_rich Low_complexity Low_complexity 1 29 0 1371 175 21 39 chr10 111440583 111440869 -34148419 - AluJo SINE Alu -31 281 1 21 36 0 0 chr10 111441273 111441301 -34147987 + AT_rich Low_complexity Low_complexity 1 28 0 7047 119 47 30 chr10 111441345 111441970 -34147318 + Tigger3b DNA MER2_type 1 614 -2414 2604 68 0 3 chr10 111441970 111442280 -34147008 - AluY SINE Alu 0 311 3 7047 119 47 30 chr10 111442280 111442576 -34146712 + Tigger3b DNA MER2_type 614 903 -2125 2511 69 16 0 chr10 111442576 111442881 -34146407 - AluY SINE Alu -1 310 1 7047 119 47 30 chr10 111442881 111443164 -34146124 + Tigger3b DNA MER2_type 903 1227 -4 489 198 0 0 chr10 111443228 111443329 -34145959 - HAL1 LINE L1 -110 2397 2297 243 279 0 13 chr10 111443433 111443512 -34145776 - MER102b DNA MER1_type -10 331 254 398 174 45 107 chr10 111443555 111443733 -34145555 + L1MC5 LINE L1 7523 7689 -272 392 251 37 73 chr10 111443740 111443931 -34145357 + L1MC5 LINE L1 7741 7924 -37 285 274 245 0 chr10 111444327 111444433 -34144855 - MIR3 SINE MIR -49 159 28 2371 88 3 0 chr10 111444668 111444963 -34144325 + AluSg1 SINE Alu 1 296 -13 2133 141 7 0 chr10 111444968 111445272 -34144016 + AluSx SINE Alu 1 306 -6 21 0 0 0 chr10 111445412 111445433 -34143855 + AT_rich Low_complexity Low_complexity 1 21 0 2437 90 0 6 chr10 111446127 111446439 -34142849 - AluSg SINE Alu 0 310 1 505 299 48 6 chr10 111446832 111446999 -34142289 - MIR SINE MIR -43 219 46 413 233 67 93 chr10 111447208 111447358 -34141930 + MIR SINE MIR 2 147 -115 807 216 178 7 chr10 111447361 111447683 -34141605 + L1ME1 LINE L1 5794 6148 -18 2310 83 3 22 chr10 111447707 111448019 -34141269 + AluSp SINE Alu 1 306 -7 188 111 28 0 chr10 111448086 111448122 -34141166 + (TTA)n Simple_repeat Simple_repeat 1 37 0 10656 51 45 5 chr10 111449183 111450482 -34138806 - SVA Other Other 0 1386 36 476 122 19 93 chr10 111450513 111450620 -34138668 + L1MB7 LINE L1 6077 6175 -9 1187 164 42 14 chr10 111450896 111451109 -34138179 + MER20 DNA MER1_type 1 219 0 1120 133 69 10 chr10 111451124 111451182 -34138106 - L1M4 LINE L1 -1093 5053 5000 2412 99 0 0 chr10 111451182 111451484 -34137804 - AluSx SINE Alu -10 302 1 1120 133 69 10 chr10 111451484 111451628 -34137660 - L1M4 LINE L1 -1146 5000 4839 318 262 154 27 chr10 111452038 111452187 -34137101 - MIR SINE MIR -47 215 48 2126 138 6 6 chr10 111452688 111453000 -34136288 + AluSx SINE Alu 1 312 0 825 143 0 15 chr10 111453062 111453221 -34136067 + FLAM_A SINE Alu 1 133 0 369 0 0 0 chr10 111453364 111453405 -34135883 + (TG)n Simple_repeat Simple_repeat 2 42 0 2050 136 13 3 chr10 111453515 111453816 -34135472 + AluSx SINE Alu 1 304 -8 395 125 0 0 chr10 111453835 111453891 -34135397 - AluSp/q SINE Alu -12 291 236 240 263 0 38 chr10 111453842 111453922 -34135366 + Alu SINE Alu 224 300 0 * 329 249 40 107 chr10 111454266 111454443 -34134845 + MIR3 SINE MIR 36 200 -8 2278 108 0 0 chr10 111454604 111454910 -34134378 - AluSq SINE Alu -7 306 1 2238 238 71 55 chr10 111455667 111455695 -34133593 + L1ME3A LINE L1 5285 5311 -859 2281 84 3 16 chr10 111455695 111456004 -34133284 + AluY SINE Alu 1 305 -6 2238 238 71 55 chr10 111456004 111456568 -34132720 + L1ME3A LINE L1 5311 5886 -284 4427 32 0 0 chr10 111456568 111457075 -34132213 + L1PA3 LINE L1 5646 6152 -3 2238 238 71 55 chr10 111457075 111457312 -34131976 + L1ME3A LINE L1 5886 6118 -52 2293 104 3 7 chr10 111460200 111460508 -34128780 + AluSp SINE Alu 2 308 -5 2049 134 3 7 chr10 111462330 111462635 -34126653 - AluJo SINE Alu -7 305 2 1398 114 85 0 chr10 111463421 111463622 -34125666 + MER1B DNA MER1_type 3 220 -77 2196 124 3 48 chr10 111463636 111463991 -34125297 - MER1B DNA MER1_type 0 339 1 2420 92 0 3 chr10 111464274 111464577 -34124711 - AluSx SINE Alu -10 302 1 189 311 40 0 chr10 111464986 111465060 -34124228 + L2 LINE L2 3231 3307 -6 23 0 0 0 chr10 111465119 111465142 -34124146 + AT_rich Low_complexity Low_complexity 1 23 0 739 182 8 0 chr10 111465340 111465461 -34123827 + FLAM_A SINE Alu 1 122 -11 584 248 155 52 chr10 111465488 111465527 -34123761 - L1ME4a LINE L1 -33 6088 6054 2130 122 7 3 chr10 111465527 111465823 -34123465 + AluSp SINE Alu 2 298 -15 584 248 155 52 chr10 111465823 111466075 -34123213 - L1ME4a LINE L1 -67 6054 5829 2165 74 44 4 chr10 111466075 111466391 -34122897 - AluY SINE Alu 0 327 1 1970 134 21 14 chr10 111466393 111466683 -34122605 - AluJb SINE Alu -18 294 3 584 248 155 52 chr10 111466683 111466793 -34122495 - L1ME4a LINE L1 -292 5829 5640 780 210 156 43 chr10 111466801 111467136 -34122152 - HAL1 LINE L1 0 2507 2129 743 133 0 112 chr10 111467136 111467231 -34122057 + AluJo/FLAM SINE Alu 2 77 -225 2433 76 0 10 chr10 111467231 111467534 -34121754 + AluY SINE Alu 1 300 -11 743 133 0 112 chr10 111467534 111467581 -34121707 + AluJo/FLAM SINE Alu 77 128 -174 780 210 156 43 chr10 111467581 111467597 -34121691 - HAL1 LINE L1 -378 2129 2116 1434 259 76 57 chr10 111467635 111467911 -34121377 - HAL1 LINE L1 -480 2027 1758 2315 113 13 0 chr10 111467911 111468220 -34121068 - AluSq SINE Alu 0 313 1 1434 259 76 57 chr10 111468220 111468709 -34120579 - HAL1 LINE L1 -749 1758 1248 2195 111 0 32 chr10 111468975 111469291 -34119997 - AluSx SINE Alu -6 306 1 467 303 15 0 chr10 111469415 111469547 -34119741 + L2 LINE L2 3139 3272 0 431 301 53 48 chr10 111469676 111469762 -34119526 - L1M4 LINE L1 -1356 4790 4706 1942 147 27 13 chr10 111469762 111470061 -34119227 - AluSx SINE Alu -9 303 1 1951 138 0 20 chr10 111470063 111470360 -34118928 - AluJb SINE Alu -21 291 1 431 301 53 48 chr10 111470360 111470682 -34118606 - L1M4 LINE L1 -1440 4706 4377 1375 142 16 123 chr10 111470803 111471113 -34118175 + AluJo SINE Alu 9 285 -27 636 268 197 46 chr10 111471154 111471626 -34117662 - MLT1H1 LTR MaLR -2 553 37 675 119 95 40 chr10 111471775 111471901 -34117387 - FLAM_C SINE Alu 0 133 1 533 248 67 87 chr10 111472682 111472786 -34116502 + MIR SINE MIR 11 116 -146 2356 94 0 3 chr10 111472786 111473083 -34116205 - AluSx SINE Alu -16 296 1 533 248 67 87 chr10 111473083 111473232 -34116056 + MIR SINE MIR 116 259 -3 2427 87 0 6 chr10 111473462 111473773 -34115515 + AluSx SINE Alu 1 309 -3 2333 114 0 0 chr10 111473839 111474145 -34115143 - AluSx SINE Alu -6 306 1 317 298 99 7 chr10 111474156 111474297 -34114991 - MIR3 SINE MIR 0 208 55 1378 191 65 32 chr10 111474716 111475087 -34114201 - L1ME2 LINE L1 0 6164 5782 845 233 98 5 chr10 111475503 111475718 -34113570 + L1ME LINE L1 5537 5771 -393 1664 152 54 34 chr10 111476406 111476702 -34112586 + AluJo SINE Alu 1 302 -10 2514 76 0 0 chr10 111477655 111477958 -34111330 - AluY SINE Alu -8 303 1 271 158 35 0 chr10 111478100 111478157 -34111131 - L1M4 LINE L1 -1620 4526 4468 1216 86 7 0 chr10 111478165 111478317 -34110971 - AluSp SINE Alu -160 153 1 2217 125 0 10 chr10 111478438 111478750 -34110538 + AluSx SINE Alu 1 309 -3 2151 111 0 17 chr10 111479100 111479412 -34109876 - AluSx SINE Alu 0 307 1 592 186 171 46 chr10 111479524 111479595 -34109693 - MER5C DNA MER1_type -1 323 262 2269 76 28 0 chr10 111479595 111479885 -34109403 - AluY SINE Alu -13 298 1 592 186 171 46 chr10 111479885 111480076 -34109212 - MER5C DNA MER1_type -62 262 28 260 286 107 0 chr10 111480199 111480283 -34109005 - MIR SINE MIR -68 140 48 322 230 60 30 chr10 111480315 111480415 -34108873 + MIR SINE MIR 51 153 -109 22 35 0 0 chr10 111480415 111480444 -34108844 + AT_rich Low_complexity Low_complexity 1 29 0 345 218 26 0 chr10 111480444 111480522 -34108766 - MIR SINE MIR 0 262 183 2416 101 0 3 chr10 111480654 111480962 -34108326 - AluSc SINE Alu -2 307 1 286 323 19 57 chr10 111481249 111481407 -34107881 - MIR SINE MIR -109 153 2 2291 94 0 3 chr10 111482117 111482415 -34106873 - AluY SINE Alu -14 297 1 1418 167 171 0 chr10 111483255 111483513 -34105775 + AluJo SINE Alu 1 302 -10 352 207 0 37 chr10 111483789 111483871 -34105417 + MIR SINE MIR 56 134 -74 1958 152 0 3 chr10 111484298 111484594 -34104694 + AluSx SINE Alu 1 295 -17 1287 161 28 5 chr10 111484603 111484821 -34104467 - MER2 DNA MER2_type 0 345 123 2422 97 0 0 chr10 111484822 111485130 -34104158 + AluSx SINE Alu 1 308 -4 1003 157 0 22 chr10 111485130 111485308 -34103980 + AluJb SINE Alu 134 307 -5 610 152 9 0 chr10 111485374 111485479 -34103809 - FLAM_C SINE Alu -36 107 2 2361 102 0 7 chr10 111486275 111486580 -34102708 - AluSq SINE Alu -10 303 1 700 251 39 44 chr10 111486609 111486812 -34102476 - MIR SINE MIR -60 202 1 417 184 0 0 chr10 111486824 111486900 -34102388 - AluJ/FRAM SINE Alu -8 304 229 22 0 0 0 chr10 111487196 111487218 -34102070 + AT_rich Low_complexity Low_complexity 1 22 0 1685 148 7 50 chr10 111487299 111487461 -34101827 - AluJb SINE Alu -18 294 127 2154 120 0 26 chr10 111487461 111487769 -34101519 - AluSx SINE Alu -12 300 1 2646 46 0 3 chr10 111487775 111488080 -34101208 - AluY SINE Alu -7 304 1 1685 148 7 50 chr10 111488080 111488188 -34101100 - AluJb SINE Alu -190 122 29 2558 217 59 18 chr10 111488201 111489237 -34100051 + L1MD2 LINE L1 4845 5928 -431 2485 84 0 3 chr10 111489533 111489844 -34099444 - AluY SINE Alu -1 310 1 372 59 0 0 chr10 111489887 111489938 -34099350 + (CA)n Simple_repeat Simple_repeat 1 51 0 457 286 50 21 chr10 111490450 111490590 -34098698 + MIR SINE MIR 26 169 -93 238 131 0 66 chr10 111490961 111491022 -34098266 - L1MB4 LINE L1 -2 6181 6124 * 454 182 20 68 chr10 111491015 111491043 -34098245 + L1MC5 LINE L1 7654 7682 -279 1696 140 77 7 chr10 111491043 111491329 -34097959 + AluJb SINE Alu 1 306 -6 454 182 20 68 chr10 111491329 111491448 -34097840 + L1MC5 LINE L1 7682 7794 -167 252 0 0 0 chr10 111491973 111492001 -34097287 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 2402 74 0 0 chr10 111492003 111492287 -34097001 - AluY SINE Alu -27 284 1 2333 95 0 0 chr10 111492509 111492813 -34096475 + AluSg SINE Alu 1 304 -6 2427 89 13 0 chr10 111492878 111493180 -34096108 + AluSg SINE Alu 1 306 -4 747 186 33 57 chr10 111493233 111493443 -34095845 - L1MB4 LINE L1 0 6180 5976 562 139 50 0 chr10 111493557 111493658 -34095630 - AluSg SINE Alu -203 107 2 487 257 91 71 chr10 111493663 111493888 -34095400 - L1ME LINE L1 -451 5670 5451 2052 148 7 0 chr10 111493888 111494185 -34095103 - AluJb SINE Alu -13 299 1 487 257 91 71 chr10 111494185 111494410 -34094878 - L1ME LINE L1 -670 5451 5176 2155 129 10 7 chr10 111495305 111495615 -34093673 - AluSx SINE Alu -1 311 1 2044 143 3 10 chr10 111496246 111496554 -34092734 + AluJb SINE Alu 1 306 -6 2210 117 3 22 chr10 111496629 111496946 -34092342 + AluSx SINE Alu 1 311 -1 2251 88 10 3 chr10 111497447 111497744 -34091544 + AluSp SINE Alu 1 299 -14 553 271 8 8 chr10 111497990 111498119 -34091169 + MER5A DNA MER1_type 2 130 -59 2372 99 0 10 chr10 111498180 111498483 -34090805 + AluSx SINE Alu 1 300 -12 606 211 9 18 chr10 111500243 111500357 -34088931 - MER81 DNA DNA 0 114 2 2562 59 0 7 chr10 111503862 111504165 -34085123 + AluY SINE Alu 1 301 -10 2363 107 0 0 chr10 111504583 111504882 -34084406 + AluSx SINE Alu 1 299 -13 1589 188 51 17 chr10 111507151 111507444 -34081844 - AluJo SINE Alu -9 303 1 2278 104 3 0 chr10 111508074 111508371 -34080917 + AluSg SINE Alu 1 298 -12 2776 45 0 0 chr10 111509424 111509734 -34079554 - AluY SINE Alu -1 310 1 2400 100 0 0 chr10 111511592 111511902 -34077386 - AluY SINE Alu -1 310 1 2465 93 0 0 chr10 111511945 111512245 -34077043 + AluSx SINE Alu 1 300 -12 1875 130 0 0 chr10 111513007 111513253 -34076035 + AluJb SINE Alu 1 246 -66 245 224 52 0 chr10 111513284 111513342 -34075946 + AluJb SINE Alu 234 294 -8 2333 103 3 0 chr10 111513963 111514264 -34075024 - AluSx SINE Alu -10 302 1 2627 214 47 57 chr10 111518564 111519025 -34070263 + L1MD2 LINE L1 4255 4719 -1427 2266 108 10 0 chr10 111519025 111519322 -34069966 + AluSx SINE Alu 1 300 -12 2627 214 47 57 chr10 111519322 111519348 -34069940 + L1MD2 LINE L1 4719 4744 -1402 2015 79 20 0 chr10 111519348 111519602 -34069686 + AluSg SINE Alu 35 293 -17 2627 214 47 57 chr10 111519602 111519613 -34069675 + L1MD2 LINE L1 4744 4754 -1392 2153 106 28 0 chr10 111519613 111519896 -34069392 + AluSp SINE Alu 1 291 -22 2627 214 47 57 chr10 111519896 111520244 -34069044 + L1MD2 LINE L1 4754 5095 -1051 3578 169 71 29 chr10 111520327 111520684 -34068604 + L1MD2 LINE L1 5079 5419 -940 1847 126 41 4 chr10 111520684 111520955 -34068333 + AluSx SINE Alu 14 294 -18 3578 169 71 29 chr10 111520955 111521446 -34067842 + L1MD2 LINE L1 5419 5971 -388 2321 102 7 0 chr10 111521446 111521740 -34067548 + AluSx SINE Alu 1 296 -16 3578 169 71 29 chr10 111521740 111521810 -34067478 + L1MD2 LINE L1 5971 6037 -322 1184 133 6 0 chr10 111521810 111521976 -34067312 + FRAM SINE Alu 1 160 -16 1198 179 103 3 chr10 111521976 111522267 -34067021 + L1MD2 LINE L1 6035 6354 -5 2001 137 0 52 chr10 111522267 111522595 -34066693 + AluJo SINE Alu 1 311 -1 2266 78 7 7 chr10 111524697 111525031 -34064257 - AluSc SINE Alu 0 334 1 302 264 189 31 chr10 111525036 111525195 -34064093 - L1MC4a LINE L1 -1638 6170 5987 427 190 109 43 chr10 111525227 111525316 -34063972 + MER113 DNA MER1_type? 124 206 -315 2508 78 3 0 chr10 111525316 111525625 -34063663 + AluY SINE Alu 1 310 -1 427 190 109 43 chr10 111525625 111525719 -34063569 + MER113 DNA MER1_type? 206 319 -202 1791 136 13 50 chr10 111525719 111526036 -34063252 + AluJo SINE Alu 1 305 -7 1719 162 39 7 chr10 111526039 111526323 -34062965 + AluJo SINE Alu 1 293 -19 333 250 67 0 chr10 111526337 111526441 -34062847 + MER113 DNA MER1_type? 359 469 -52 1964 133 47 0 chr10 111528106 111528384 -34060904 + AluSx SINE Alu 3 293 -19 2272 120 7 7 chr10 111528919 111529228 -34060060 + AluSx SINE Alu 1 309 -3 423 91 0 0 chr10 111530686 111530741 -34058547 + FRAM SINE Alu 66 120 -56 1834 148 4 11 chr10 111530744 111531014 -34058274 - AluJo SINE Alu -44 268 1 3738 157 51 92 chr10 111531249 111531903 -34057385 + MER21B LTR ERV1 1 610 -253 848 118 7 22 chr10 111531903 111532038 -34057250 + FLAM_C SINE Alu 1 133 0 3738 157 51 92 chr10 111532038 111532282 -34057006 + MER21B LTR ERV1 610 862 -1 996 100 18 3 chr10 111533016 111533242 -34056046 + AluJb SINE Alu 5 299 -13 898 113 0 50 chr10 111533333 111533474 -34055814 + AluJo SINE Alu 1 134 -178 2123 130 0 55 chr10 111533848 111534031 -34055257 - AluSx SINE Alu 0 312 121 186 43 0 0 chr10 111534031 111534054 -34055234 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2253 97 0 0 chr10 111534056 111534334 -34054954 - AluSg SINE Alu -31 279 2 2123 130 0 55 chr10 111534334 111534477 -34054811 - AluSx SINE Alu -192 120 1 838 139 8 0 chr10 111534478 111534600 -34054688 - AluJb SINE Alu -13 299 177 221 255 255 19 chr10 111534618 111534724 -34054564 - MIR SINE MIR -112 150 20 1983 136 0 14 chr10 111534763 111534898 -34054390 + AluSx SINE Alu 1 136 -176 2248 83 3 33 chr10 111534898 111535200 -34054088 + AluSc SINE Alu 1 293 -16 1983 136 0 14 chr10 111535200 111535351 -34053937 + AluSx SINE Alu 136 283 -29 459 0 0 0 chr10 111535354 111535405 -34053883 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 1172 71 13 13 chr10 111535803 111535947 -34053341 + AluSg/x SINE Alu 154 300 -10 2376 93 0 6 chr10 111535947 111536259 -34053029 + AluSg SINE Alu 1 310 0 685 240 188 17 chr10 111536279 111536571 -34052717 + L2 LINE L2 2356 2697 -617 1833 156 7 3 chr10 111536571 111536853 -34052435 - AluJb SINE Alu -16 296 14 313 111 0 0 chr10 111536874 111536934 -34052354 + FLAM_A SINE Alu 84 133 0 1916 172 3 3 chr10 111536952 111537254 -34052034 + AluJo SINE Alu 1 302 -10 872 245 102 5 chr10 111537272 111537609 -34051679 + L2 LINE L2 2722 3170 -143 193 213 53 80 chr10 111537677 111537752 -34051536 - L2 LINE L2 -12 3260 3188 208 0 0 0 chr10 111537781 111537804 -34051484 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 2261 107 3 0 chr10 111537804 111538095 -34051193 - AluSq SINE Alu -1 314 1 281 269 0 0 chr10 111538179 111538246 -34051042 + L1MC5 LINE L1 7826 7892 -69 * 1416 167 44 16 chr10 111538245 111538498 -34050790 - AluJo SINE Alu -20 292 35 239 333 44 0 chr10 111538660 111538750 -34050538 + L3 LINE CR1 283 376 -1201 32 0 0 0 chr10 111538754 111538786 -34050502 + AT_rich Low_complexity Low_complexity 1 32 0 968 106 0 21 chr10 111538805 111538823 -34050465 - AluJb SINE Alu -173 139 122 8148 41 18 0 chr10 111538823 111539775 -34049513 + LTR5 LTR ERVK 1 969 0 968 106 0 21 chr10 111539775 111539898 -34049390 - AluJb SINE Alu -190 122 1 214 340 57 0 chr10 111539898 111540004 -34049284 + L3 LINE CR1 367 478 -1099 560 213 108 0 chr10 111540052 111540207 -34049081 + MIR SINE MIR 13 182 -67 207 314 15 129 chr10 111540429 111540607 -34048681 + L3 LINE CR1 1332 1529 -48 1504 169 25 25 chr10 111540607 111540913 -34048375 + AluJo SINE Alu 10 315 0 1759 126 0 4 chr10 111540913 111541174 -34048114 + AluSq SINE Alu 1 260 -53 207 314 15 129 chr10 111541174 111541256 -34048032 + L3 LINE CR1 1527 1565 -12 190 214 369 0 chr10 111544577 111544661 -34044627 - L2 LINE L2 -227 3045 2931 343 286 34 43 chr10 111545099 111545287 -34044001 + MIR3 SINE MIR 2 186 -76 2277 80 3 7 chr10 111546310 111546612 -34042676 + AluSq SINE Alu 1 301 -12 334 307 61 55 chr10 111547162 111547325 -34041963 + MIR SINE MIR 27 190 -72 314 254 55 4 chr10 111551071 111551158 -34038130 - MIR SINE MIR -62 146 64 448 304 24 77 chr10 111551388 111551445 -34037843 - MER91A DNA MER1_type 0 196 138 2487 57 0 0 chr10 111551445 111551746 -34037542 + AluY SINE Alu 1 301 -10 448 304 24 77 chr10 111551746 111551895 -34037393 - MER91A DNA MER1_type -58 138 1 2375 75 7 0 chr10 111553876 111554183 -34035105 - AluYa5 SINE Alu -2 309 1 219 330 125 0 chr10 111554754 111554842 -34034446 + MIR SINE MIR 2 100 -162 202 184 0 61 chr10 111554887 111554936 -34034352 + L2 LINE L2 3216 3261 -11 247 169 110 29 chr10 111556472 111556608 -34032680 + (CCCGG)n Simple_repeat Simple_repeat 3 149 0 21 0 0 0 chr10 111556625 111556646 -34032642 + GC_rich Low_complexity Low_complexity 1 21 0 274 267 70 12 chr10 111557696 111557782 -34031506 + MIR SINE MIR 32 122 -86 333 250 125 0 chr10 111560067 111560187 -34029101 - L3b LINE CR1 -106 1477 1343 185 268 146 24 chr10 111562693 111562775 -34026513 - L3b LINE CR1 -188 1395 1304 1372 191 43 0 chr10 111562832 111563111 -34026177 - AluJo SINE Alu 0 312 30 182 328 31 31 chr10 111563223 111563287 -34026001 - MIR3 SINE MIR -54 154 91 230 272 32 40 chr10 111563526 111563651 -34025637 + (CAGAGA)n Simple_repeat Simple_repeat 1 124 0 2237 117 0 0 chr10 111565080 111565387 -34023901 - AluSq SINE Alu -6 307 1 420 55 0 0 chr10 111565427 111565482 -34023806 + (CA)n Simple_repeat Simple_repeat 2 56 0 228 35 0 0 chr10 111565537 111565566 -34023722 + (CA)n Simple_repeat Simple_repeat 1 29 0 206 307 0 11 chr10 111565737 111565825 -34023463 + (CA)n Simple_repeat Simple_repeat 1 87 0 190 186 23 23 chr10 111566713 111566756 -34022532 + L3b LINE CR1 1342 1384 -199 21 71 0 0 chr10 111567012 111567054 -34022234 + GC_rich Low_complexity Low_complexity 1 42 0 360 284 102 51 chr10 111567332 111567508 -34021780 + MIR SINE MIR 28 212 -50 241 204 0 0 chr10 111568027 111568076 -34021212 - L2 LINE L2 0 3313 3265 350 240 77 0 chr10 111569843 111569947 -34019341 + Charlie8 DNA MER1_type 71 182 -2235 189 0 0 0 chr10 111571149 111571170 -34018118 + (CAGCC)n Simple_repeat Simple_repeat 3 23 0 233 254 0 0 chr10 111572800 111572855 -34016433 + C-rich Low_complexity Low_complexity 1 55 0 810 262 131 48 chr10 111573208 111573605 -34015683 + L2 LINE L2 2874 3303 -10 363 315 73 64 chr10 111573617 111573931 -34015357 + L2 LINE L2 2213 2529 -785 1489 147 6 99 chr10 111574008 111574341 -34014947 - AluJb SINE Alu -10 302 1 319 193 12 72 chr10 111574394 111574477 -34014811 + MER116 DNA Mariner 1 78 -2 1226 319 114 16 chr10 111574505 111575302 -34013986 + L2 LINE L2 2014 2888 -426 194 0 39 0 chr10 111575302 111575328 -34013960 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2105 98 17 0 chr10 111575330 111575617 -34013671 - AluSx SINE Alu -20 292 1 244 167 67 33 chr10 111575825 111575885 -34013403 - L2 LINE L2 -10 3303 3242 851 137 0 0 chr10 111575980 111576097 -34013191 + FLAM_C SINE Alu 1 117 -16 22 25 0 25 chr10 111576107 111576120 -34013168 + AT_rich Low_complexity Low_complexity 1 13 -26 2306 94 3 0 chr10 111576120 111576427 -34012861 + AluY SINE Alu 1 308 -3 22 25 0 25 chr10 111576427 111576453 -34012835 + AT_rich Low_complexity Low_complexity 13 39 0 313 306 38 51 chr10 111576655 111576812 -34012476 - MIR SINE MIR -85 177 23 2051 72 76 4 chr10 111577192 111577468 -34011820 - AluSq SINE Alu -7 306 11 2396 67 3 16 chr10 111577505 111577847 -34011441 - AluSp SINE Alu 0 313 1 969 198 49 76 chr10 111578385 111578506 -34010782 - MIR SINE MIR -2 260 137 2272 95 0 13 chr10 111578506 111578822 -34010466 - AluSx SINE Alu 0 312 1 969 198 49 76 chr10 111578822 111578963 -34010325 - MIR SINE MIR -125 137 5 332 93 0 19 chr10 111580233 111580287 -34009001 + (TC)n Simple_repeat Simple_repeat 1 53 0 2458 64 0 3 chr10 111580288 111580603 -34008685 - AluSg SINE Alu 0 314 1 1007 167 38 75 chr10 111580650 111580890 -34008398 - AluJb SINE Alu -1 311 81 238 278 178 0 chr10 111581330 111581420 -34007868 - L2 LINE L2 -25 3247 3142 2030 138 0 26 chr10 111581471 111581783 -34007505 + AluJb SINE Alu 9 312 0 188 103 51 0 chr10 111583077 111583116 -34006172 + G-rich Low_complexity Low_complexity 3 43 0 1208 128 0 6 chr10 111584351 111584530 -34004758 - AluSg/x SINE Alu -1 309 132 2292 101 3 0 chr10 111584530 111584837 -34004451 - AluSx SINE Alu -4 308 1 246 273 0 0 chr10 111584926 111584981 -34004307 + L2 LINE L2 3251 3305 -8 1089 155 0 32 chr10 111585042 111585229 -34004059 + AluJb SINE Alu 132 312 0 389 205 19 142 chr10 111585288 111585493 -34003795 + MIR SINE MIR 83 262 0 341 298 118 25 chr10 111585688 111585849 -34003439 + MIR3 SINE MIR 33 208 0 2398 55 0 26 chr10 111586156 111586466 -34002822 + AluY SINE Alu 1 302 -9 2004 131 3 19 chr10 111586631 111586945 -34002343 + AluSx SINE Alu 1 309 -3 2406 58 3 13 chr10 111586948 111587261 -34002027 + AluY SINE Alu 1 310 -1 2448 60 0 0 chr10 111587275 111587575 -34001713 + AluY SINE Alu 1 300 -11 905 187 6 0 chr10 111587575 111587746 -34001542 + AluJo/FRAM SINE Alu 137 308 -4 2375 73 0 3 chr10 111587814 111588116 -34001172 + AluSc SINE Alu 1 301 -8 1837 142 0 30 chr10 111588124 111588426 -34000862 + AluJb SINE Alu 7 299 -13 421 198 153 9 chr10 111588445 111588556 -34000732 + AluJo/FLAM SINE Alu 7 133 -179 2425 71 10 0 chr10 111588559 111588867 -34000421 + AluY SINE Alu 1 311 0 3078 191 81 49 chr10 111588907 111589068 -34000220 - L1MC4 LINE L1 -298 7744 7590 1793 172 0 0 chr10 111589068 111589359 -33999929 - AluJb SINE Alu -21 291 1 3078 191 81 49 chr10 111589359 111589540 -33999748 - L1MC4 LINE L1 -452 7590 7416 2672 154 28 51 chr10 111589540 111589702 -33999586 - LTR42 LTR ERVL 0 495 331 1620 162 3 45 chr10 111589702 111590011 -33999277 - AluJo SINE Alu -16 296 1 2672 154 28 51 chr10 111590011 111590355 -33998933 - LTR42 LTR ERVL -164 331 1 3078 191 81 49 chr10 111590355 111590596 -33998692 - L1MC4 LINE L1 -626 7416 7184 2319 82 3 9 chr10 111590596 111590911 -33998377 - AluSq SINE Alu 0 313 1 2263 73 3 29 chr10 111590911 111591226 -33998062 - AluSp SINE Alu 0 313 7 3078 191 81 49 chr10 111591226 111591426 -33997862 - L1MC4 LINE L1 -858 7184 6992 2473 58 0 0 chr10 111591426 111591735 -33997553 - AluY SINE Alu -2 309 1 3078 191 81 49 chr10 111591735 111591888 -33997400 - L1MC4 LINE L1 -1050 6992 6774 2012 73 25 11 chr10 111591892 111592166 -33997122 + AluSg SINE Alu 1 278 -32 234 0 0 0 chr10 111592171 111592197 -33997091 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 325 308 93 28 chr10 111592342 111592402 -33996886 + L2 LINE L2 2554 2609 -705 2262 131 39 0 chr10 111592402 111592737 -33996551 - MER7A DNA MER2_type 0 346 1 325 308 93 28 chr10 111592737 111592881 -33996407 + L2 LINE L2 2609 2779 -535 2134 89 0 38 chr10 111592881 111593195 -33996093 + AluSg SINE Alu 1 302 -8 325 308 93 28 chr10 111593195 111593236 -33996052 + L2 LINE L2 2779 2816 -498 544 224 66 66 chr10 111593410 111593593 -33995695 + L2 LINE L2 3130 3312 -1 381 261 76 34 chr10 111593606 111593725 -33995563 + L2 LINE L2 2926 3049 -264 1904 151 0 0 chr10 111593776 111594103 -33995185 + AluSx SINE Alu 1 327 0 1835 111 36 18 chr10 111594110 111594389 -33994899 + AluSq SINE Alu 3 286 -27 350 240 23 61 chr10 111594389 111594559 -33994729 - L1MC4 LINE L1 -1339 6983 1903 1977 112 0 21 chr10 111594589 111594725 -33994563 + AluSg SINE Alu 1 138 -168 2050 100 28 7 chr10 111594725 111595016 -33994272 + AluSg1 SINE Alu 1 297 -12 1977 112 0 21 chr10 111595016 111595191 -33994097 + AluSg SINE Alu 138 306 0 488 229 62 84 chr10 111595191 111595370 -33993918 - MIR SINE MIR -8 254 80 1983 128 6 19 chr10 111595492 111595805 -33993483 + AluSx SINE Alu 1 309 -3 2517 43 0 0 chr10 111596216 111596520 -33992768 - AluY SINE Alu -6 305 2 279 245 165 2 chr10 111596575 111596688 -33992600 - MIR SINE MIR -62 146 44 1755 131 12 38 chr10 111597020 111597340 -33991948 - AluJb SINE Alu 0 312 1 260 324 49 0 chr10 111599233 111599335 -33989953 - MIR SINE MIR -138 124 18 471 310 21 27 chr10 111599410 111599422 -33989866 - MIR SINE MIR -49 213 202 2044 113 7 3 chr10 111599422 111599722 -33989566 - AluSx SINE Alu -11 301 1 471 310 21 27 chr10 111599722 111599733 -33989555 - MIR SINE MIR -60 202 192 2140 126 0 3 chr10 111599733 111600043 -33989245 - AluSg SINE Alu -1 309 1 471 310 21 27 chr10 111600043 111600205 -33989083 - MIR SINE MIR -70 192 28 1656 164 0 11 chr10 111600809 111601089 -33988199 + AluJb SINE Alu 11 287 -25 2136 95 3 7 chr10 111601253 111601549 -33987739 - AluSp SINE Alu -18 295 1 1772 139 46 26 chr10 111601693 111601753 -33987535 - AluJb SINE Alu -4 308 251 7186 87 10 2 chr10 111601753 111602714 -33986574 - LTR5 LTR ERVK 0 969 1 1772 139 46 26 chr10 111602714 111602955 -33986333 - AluJb SINE Alu -61 251 1 530 130 65 0 chr10 111602988 111603080 -33986208 + L1MA1 LINE L1 6178 6275 -27 2073 193 50 45 chr10 111603235 111603718 -33985570 + MLT1D LTR MaLR 21 505 0 440 322 78 12 chr10 111603941 111604186 -33985102 + MLT1K LTR MaLR 3 263 -325 1273 145 86 86 chr10 111604392 111604535 -33984753 - AluJo SINE Alu -22 290 148 2022 101 24 7 chr10 111604535 111604833 -33984455 - AluSc SINE Alu -6 303 1 1273 145 86 86 chr10 111604833 111604979 -33984309 - AluJo SINE Alu -163 149 1 2153 95 3 13 chr10 111605532 111605837 -33983451 - AluSx SINE Alu -10 302 1 2097 123 3 0 chr10 111606362 111606670 -33982618 - AluSc SINE Alu 0 309 1 1662 184 0 13 chr10 111607413 111607718 -33981570 + AluJb SINE Alu 1 301 -11 505 294 77 43 chr10 111607961 111608196 -33981092 + MIR SINE MIR 20 262 0 630 169 37 7 chr10 111609183 111609319 -33979969 - MER5B DNA MER1_type -33 145 6 182 279 0 0 chr10 111610187 111610230 -33979058 + MIR SINE MIR 210 252 -10 2224 57 13 10 chr10 111610548 111610847 -33978441 - AluY SINE Alu -9 302 3 362 293 24 1 chr10 111611040 111611156 -33978132 + MIR SINE MIR 38 157 -65 547 208 0 0 chr10 111611424 111611520 -33977768 - AluJ/FLAM SINE Alu -212 100 5 2049 112 3 0 chr10 111611555 111611842 -33977446 + AluSx SINE Alu 8 295 -17 2381 97 0 0 chr10 111611888 111612198 -33977090 + AluSg SINE Alu 1 310 0 2046 123 0 13 chr10 111612215 111612351 -33976937 + AluSx SINE Alu 1 137 -175 2141 92 0 20 chr10 111612351 111612654 -33976634 + AluSg SINE Alu 1 297 -13 2046 123 0 13 chr10 111612654 111612817 -33976471 + AluSx SINE Alu 137 296 -16 390 276 103 13 chr10 111612828 111612984 -33976304 - MIR SINE MIR -16 246 77 601 274 52 28 chr10 111613474 111613580 -33975708 - MIR SINE MIR 0 262 160 2255 104 3 0 chr10 111613580 111613887 -33975401 + AluSx SINE Alu 1 308 -4 601 274 52 28 chr10 111613887 111613992 -33975296 - MIR SINE MIR -102 160 46 2025 125 7 0 chr10 111614411 111614714 -33974574 - AluSx SINE Alu -7 305 1 556 222 24 30 chr10 111614742 111614909 -33974379 + L1MA10 LINE L1 6169 6334 0 2118 89 10 10 chr10 111615033 111615335 -33973953 - AluSq SINE Alu -11 302 1 1153 71 65 22 chr10 111615335 111615519 -33973769 - LTR1 LTR ERV1 -593 192 1 242 326 76 30 chr10 111615585 111615717 -33973571 - MIR SINE MIR -49 213 76 2061 71 19 0 chr10 111615795 111616061 -33973227 + AluY SINE Alu 27 297 -14 203 108 0 54 chr10 111616382 111616419 -33972869 + (CTGGGG)n Simple_repeat Simple_repeat 2 36 0 2116 92 31 3 chr10 111616923 111617217 -33972071 - AluSq SINE Alu -11 302 1 1937 127 23 20 chr10 111618856 111619156 -33970132 + AluSx SINE Alu 1 301 -11 384 313 21 21 chr10 111619211 111619355 -33969933 + MIR3 SINE MIR 24 167 -41 998 182 0 0 chr10 111619395 111619554 -33969734 + FRAM SINE Alu 1 159 -7 1769 148 30 30 chr10 111619646 111619950 -33969338 - AluSx SINE Alu -8 304 1 934 110 0 0 chr10 111620377 111620504 -33968784 - AluY SINE Alu -184 127 1 614 293 58 0 chr10 111620675 111620866 -33968422 + MIR SINE MIR 46 247 -15 195 42 0 0 chr10 111621559 111621583 -33967705 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 686 287 186 31 chr10 111621583 111621970 -33967318 - L2 LINE L2 -13 3300 2854 1897 127 10 3 chr10 111622013 111622326 -33966962 - AluJb SINE Alu 0 312 1 712 256 119 56 chr10 111622328 111622388 -33966900 - L2 LINE L2 -569 2745 2690 2023 103 0 23 chr10 111622388 111622689 -33966599 + AluSx SINE Alu 1 294 -18 712 256 119 56 chr10 111622689 111623023 -33966265 - L2 LINE L2 -624 2690 2326 1756 105 48 54 chr10 111623432 111623746 -33965542 - AluSx SINE Alu 0 312 1 1045 88 0 7 chr10 111623746 111623883 -33965405 - AluSq/x SINE Alu -176 136 1 2102 88 24 17 chr10 111624531 111624825 -33964463 + AluSx SINE Alu 1 296 -16 688 245 75 0 chr10 111624982 111625141 -33964147 - MER5B DNA MER1_type -4 174 4 506 222 250 34 chr10 111625157 111625333 -33963955 - MER20 DNA MER1_type -5 214 1 409 331 33 16 chr10 111625360 111625431 -33963857 + MIR SINE MIR 9 77 -185 2060 125 3 19 chr10 111625431 111625742 -33963546 + AluSx SINE Alu 2 307 -5 409 331 33 16 chr10 111625742 111625854 -33963434 + MIR SINE MIR 77 195 -67 2081 89 33 20 chr10 111625970 111626272 -33963016 - AluSg SINE Alu -4 306 1 186 43 0 0 chr10 111627840 111627863 -33961425 + (TGGGGG)n Simple_repeat Simple_repeat 1 23 0 215 236 0 18 chr10 111628099 111628154 -33961134 + (CA)n Simple_repeat Simple_repeat 1 54 0 1644 91 36 0 chr10 111630061 111630281 -33959007 + MER30 DNA MER1_type 3 230 0 23 0 0 0 chr10 111630909 111630932 -33958356 + AT_rich Low_complexity Low_complexity 1 23 0 1911 113 3 21 chr10 111630940 111631254 -33958034 + AluSx SINE Alu 5 313 0 728 221 7 0 chr10 111632308 111632457 -33956831 - Charlie8 DNA MER1_type -2172 245 96 185 321 48 24 chr10 111632574 111632658 -33956630 + L2 LINE L2 3207 3292 -21 2046 150 0 21 chr10 111633437 111633763 -33955525 + MER1B DNA MER1_type 21 339 0 2304 69 3 13 chr10 111633786 111634092 -33955196 + AluSp SINE Alu 1 303 -10 1502 168 46 33 chr10 111634156 111634460 -33954828 - AluJb SINE Alu -4 308 1 1691 147 8 0 chr10 111634522 111634788 -33954500 + AluSq SINE Alu 11 278 -35 490 135 297 9 chr10 111634799 111634910 -33954378 + AluJo SINE Alu 125 267 -45 423 256 40 85 chr10 111634911 111635005 -33954283 + MIR SINE MIR 17 99 -163 2537 46 0 0 chr10 111635005 111635309 -33953979 - AluY SINE Alu -7 304 1 423 256 40 85 chr10 111635309 111635413 -33953875 + MIR SINE MIR 99 206 -56 364 245 37 10 chr10 111636570 111636712 -33952576 + L1ME4a LINE L1 1205 6108 -8 26 50 0 0 chr10 111636719 111636759 -33952529 + AT_rich Low_complexity Low_complexity 1 40 0 2171 118 0 0 chr10 111636910 111637207 -33952081 + AluSx SINE Alu 1 297 -15 2129 78 11 3 chr10 111637354 111637636 -33951652 + AluY SINE Alu 23 306 -5 1995 132 20 0 chr10 111638089 111638385 -33950903 + AluSx SINE Alu 1 302 -10 226 228 0 0 chr10 111638511 111638568 -33950720 + L1ME4a LINE L1 6060 6116 -5 2222 77 0 17 chr10 111639148 111639448 -33949840 - AluY SINE Alu -16 295 1 2356 94 0 0 chr10 111639448 111639747 -33949541 - AluSg SINE Alu -21 289 1 2157 110 10 10 chr10 111640098 111640406 -33948882 + AluSx SINE Alu 1 308 -4 1689 130 3 84 chr10 111641591 111641729 -33947559 + AluSx SINE Alu 1 149 -153 1580 185 14 21 chr10 111641729 111642015 -33947273 + AluJb SINE Alu 1 284 -28 204 67 0 0 chr10 111642015 111642045 -33947243 + (CCAA)n Simple_repeat Simple_repeat 2 31 0 1510 157 60 53 chr10 111642052 111642183 -33947105 + AluJb SINE Alu 1 130 -182 2093 137 3 0 chr10 111642183 111642489 -33946799 - AluSx SINE Alu -5 307 1 1510 157 60 53 chr10 111642489 111642656 -33946632 + AluJb SINE Alu 130 301 -11 2321 92 0 0 chr10 111642666 111642959 -33946329 + AluY SINE Alu 1 293 -18 1689 130 3 84 chr10 111642959 111643108 -33946180 + AluSx SINE Alu 163 283 -19 189 0 0 0 chr10 111643108 111643129 -33946159 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 1423 57 0 6 chr10 111643134 111643309 -33945979 - AluY SINE Alu -7 304 131 1973 72 0 12 chr10 111643309 111643560 -33945728 - AluY SINE Alu 0 311 64 356 228 0 0 chr10 111643573 111643652 -33945636 + Charlie8 DNA MER1_type 149 227 -2190 292 191 52 52 chr10 111644130 111644266 -33945022 + L1MC5 LINE L1 7563 7698 -263 2186 107 33 0 chr10 111644275 111644575 -33944713 + AluSx SINE Alu 1 310 -2 421 231 75 8 chr10 111644579 111644713 -33944575 + L1MC5 LINE L1 7783 7925 -36 953 168 0 45 chr10 111644820 111644999 -33944289 + FRAM SINE Alu 5 175 -1 327 195 115 23 chr10 111645031 111645118 -33944170 - FLAM_A SINE Alu -4 129 35 1758 181 7 0 chr10 111645190 111645483 -33943805 + AluJo SINE Alu 2 296 -16 1372 151 82 33 chr10 111645906 111646151 -33943137 - AluJo SINE Alu -55 257 1 1965 123 7 25 chr10 111647530 111647666 -33941622 + AluSx SINE Alu 1 138 -174 2499 25 7 0 chr10 111647666 111647986 -33941302 + AluY SINE Alu 1 322 0 1965 123 7 25 chr10 111647986 111648132 -33941156 + AluSx SINE Alu 138 279 -33 2198 119 7 0 chr10 111648170 111648473 -33940815 + AluJb SINE Alu 2 306 -6 199 345 175 11 chr10 111648574 111648751 -33940537 + MIR SINE MIR 8 213 -49 377 224 48 91 chr10 111649042 111649207 -33940081 + MIR SINE MIR 80 237 -25 28 71 0 0 chr10 111651550 111651606 -33937682 + GC_rich Low_complexity Low_complexity 1 56 0 667 147 37 59 chr10 111653298 111653434 -33935854 + FLAM_C SINE Alu 1 133 0 2319 108 0 0 chr10 111653761 111654057 -33935231 - AluSx SINE Alu -16 296 1 2224 112 0 26 chr10 111655340 111655652 -33933636 - AluSx SINE Alu -8 304 1 220 225 11 101 chr10 111656590 111656679 -33932609 - L3 LINE CR1 -65 1512 1432 277 234 84 0 chr10 111657013 111657120 -33932168 - L1MC4 LINE L1 -3 8039 7924 2060 143 0 10 chr10 111657225 111657519 -33931769 - AluJb SINE Alu -21 291 1 2305 83 7 0 chr10 111657597 111657885 -33931403 - AluY SINE Alu -21 290 1 2135 135 0 3 chr10 111657918 111658214 -33931074 + AluSx SINE Alu 1 295 -17 2418 94 0 0 chr10 111658217 111658547 -33930741 + AluSp SINE Alu 1 330 0 419 251 57 86 chr10 111658946 111659089 -33930199 - MIR SINE MIR -87 175 36 1941 169 0 3 chr10 111659089 111659390 -33929898 - AluJo SINE Alu -12 300 1 419 251 57 86 chr10 111659390 111659421 -33929867 - MIR SINE MIR -226 36 6 1866 181 6 16 chr10 111660161 111660476 -33928812 + AluJo SINE Alu 1 312 0 376 284 51 130 chr10 111660779 111661071 -33928217 - L2 LINE L2 0 3272 3004 1919 152 7 7 chr10 111661262 111661564 -33927724 - AluJb SINE Alu -9 303 2 2454 83 3 0 chr10 111662694 111662994 -33926294 - AluSx SINE Alu -11 301 1 498 163 0 0 chr10 111663492 111663578 -33925710 - AluSx SINE Alu 0 310 225 1052 109 7 27 chr10 111663579 111663726 -33925562 - AluSx SINE Alu -142 170 27 1988 71 107 0 chr10 111663932 111664184 -33925104 - AluSc SINE Alu -17 292 14 2453 88 3 0 chr10 111664220 111664517 -33924771 + AluSq SINE Alu 1 298 -15 1067 169 6 0 chr10 111664517 111664695 -33924593 + AluSg/x SINE Alu 134 312 0 1023 204 67 8 chr10 111665489 111665726 -33923562 - MIR SINE MIR -1 261 17 432 118 0 0 chr10 111665871 111665939 -33923349 + (TCTA)n Simple_repeat Simple_repeat 4 71 0 1656 159 59 0 chr10 111665939 111666209 -33923079 - AluJb SINE Alu -26 286 1 2385 63 10 7 chr10 111666236 111666538 -33922750 + AluY SINE Alu 1 303 -8 2207 106 7 13 chr10 111666621 111666923 -33922365 + AluSq SINE Alu 1 300 -13 2427 80 0 0 chr10 111667161 111667450 -33921838 - AluSx SINE Alu -23 289 1 4851 140 19 22 chr10 111667450 111667583 -33921705 - L1MC2 LINE L1 -109 6235 6103 2557 79 0 6 chr10 111667583 111667898 -33921390 - AluSq SINE Alu 0 313 1 4851 140 19 22 chr10 111667898 111668662 -33920626 - L1MC2 LINE L1 -241 6103 5341 182 412 0 0 chr10 111670195 111670263 -33919025 - L2 LINE L2 -45 3268 3201 641 253 107 20 chr10 111671167 111671548 -33917740 + L2 LINE L2 2717 3128 -185 858 141 8 0 chr10 111671562 111671683 -33917605 - FLAM_C SINE Alu -21 122 1 2406 94 16 0 chr10 111671692 111671999 -33917289 - AluSx SINE Alu 0 312 1 344 182 222 97 chr10 111672053 111672229 -33917059 + L2 LINE L2 3116 3313 0 2180 125 3 0 chr10 111672471 111672788 -33916500 - AluSx SINE Alu 0 318 1 191 317 0 0 chr10 111672824 111672865 -33916423 + L2 LINE L2 3207 3247 -25 2102 133 0 29 chr10 111672866 111673182 -33916106 - AluSx SINE Alu -5 307 1 447 287 105 11 chr10 111673185 111673366 -33915922 - L2 LINE L2 -9 3304 3107 2035 112 47 0 chr10 111673367 111673643 -33915645 + 7SLRNA srpRNA srpRNA 29 317 -3 2190 121 3 3 chr10 111673650 111673955 -33915333 + AluJb SINE Alu 2 306 -6 213 217 183 0 chr10 111674029 111674089 -33915199 - L2 LINE L2 -217 3055 2985 * 317 218 90 13 chr10 111674088 111674166 -33915122 + MER91C DNA MER1_type 26 109 -31 405 268 35 14 chr10 111674176 111674318 -33914970 - L2 LINE L2 -341 2972 2828 2511 66 0 22 chr10 111674363 111674681 -33914607 - AluY SINE Alu 0 311 1 189 74 0 0 chr10 111674878 111674905 -33914383 + (TA)n Simple_repeat Simple_repeat 2 28 0 2005 158 3 3 chr10 111675672 111675970 -33913318 + AluJo SINE Alu 6 303 -9 198 103 0 0 chr10 111676329 111676358 -33912930 + (T)n Simple_repeat Simple_repeat 1 29 0 21 36 0 0 chr10 111676567 111676595 -33912693 + AT_rich Low_complexity Low_complexity 1 28 0 807 70 0 0 chr10 111676871 111676971 -33912317 + AluSg SINE Alu 1 100 -210 517 153 0 0 chr10 111676972 111677044 -33912244 + AluJb SINE Alu 211 282 -30 2253 71 0 0 chr10 111677084 111677352 -33911936 + AluSc SINE Alu 41 308 -1 488 264 179 10 chr10 111677375 111677576 -33911712 - MIR SINE MIR -20 242 8 2101 150 3 0 chr10 111677827 111678133 -33911155 - AluJo SINE Alu -5 307 1 1742 175 0 53 chr10 111678335 111678655 -33910633 + AluJo SINE Alu 1 303 -9 457 285 142 61 chr10 111679089 111679339 -33909949 - LTR33 LTR ERVL -100 421 134 1927 125 0 46 chr10 111679339 111679644 -33909644 - AluSx SINE Alu -17 295 5 457 285 142 61 chr10 111679644 111679737 -33909551 - LTR33 LTR ERVL -387 134 50 897 216 93 13 chr10 111679739 111679975 -33909313 - MLT1E LTR MaLR -2 591 337 224 276 236 51 chr10 111680149 111680540 -33908748 - L2 LINE L2 -466 2848 2531 2005 192 102 11 chr10 111680540 111680669 -33908619 - MLT1D LTR MaLR -4 501 385 2012 148 0 7 chr10 111680669 111680966 -33908322 + AluJb SINE Alu 1 295 -17 2005 192 102 11 chr10 111680966 111681295 -33907993 - MLT1D LTR MaLR -120 385 1 224 276 236 51 chr10 111681295 111681512 -33907776 - L2 LINE L2 -783 2531 2127 2385 78 3 0 chr10 111681526 111681819 -33907469 + AluY SINE Alu 1 294 -17 2370 100 0 3 chr10 111682584 111682893 -33906395 + AluSc SINE Alu 1 308 -1 348 192 77 67 chr10 111683221 111683310 -33905978 - L2 LINE L2 -34 3279 3192 393 39 0 0 chr10 111683310 111683361 -33905927 + (ATG)n Simple_repeat Simple_repeat 2 52 0 1899 121 14 28 chr10 111683361 111683650 -33905638 - AluSx SINE Alu -27 285 1 348 192 77 67 chr10 111683650 111683663 -33905625 - L2 LINE L2 -120 3193 3175 2496 88 0 0 chr10 111683734 111684041 -33905247 - AluSc SINE Alu -2 307 1 2044 150 0 0 chr10 111684203 111684490 -33904798 - AluSx SINE Alu -25 287 1 1767 193 7 0 chr10 111684509 111684810 -33904478 - AluJb SINE Alu -9 303 1 3601 135 48 2 chr10 111684811 111685420 -33903868 - L1MB3 LINE L1 -32 6151 5515 341 286 55 35 chr10 111685584 111685783 -33903505 - L1ME4a LINE L1 -289 5832 5630 232 252 135 45 chr10 111685795 111685906 -33903382 - MIR SINE MIR 0 262 142 1087 123 18 110 chr10 111685907 111686135 -33903153 - L1MC1 LINE L1 0 6333 6127 819 183 14 16 chr10 111686173 111686336 -33902952 - MIR SINE MIR -65 143 5 575 165 78 0 chr10 111686419 111686522 -33902766 + MER81 DNA DNA 3 113 -1 4812 190 166 94 chr10 111686552 111687088 -33902200 - L1MC4a LINE L1 -246 7562 7066 180 111 0 0 chr10 111687088 111687115 -33902173 + (TTTA)n Simple_repeat Simple_repeat 4 30 0 4812 190 166 94 chr10 111687115 111687191 -33902097 - L1MC4a LINE L1 -742 7066 6997 316 241 0 0 chr10 111687191 111687277 -33902011 - MLT2D LTR ERVL -40 480 297 4812 190 166 94 chr10 111687277 111687748 -33901540 - L1MC4a LINE L1 -811 6997 6561 2277 116 0 0 chr10 111687748 111688042 -33901246 + AluSx SINE Alu 1 294 -18 4812 190 166 94 chr10 111688042 111688119 -33901169 - L1MC4a LINE L1 -1247 6561 6491 2301 106 0 0 chr10 111688119 111688412 -33900876 + AluSx SINE Alu 1 293 -19 4812 190 166 94 chr10 111688412 111688763 -33900525 - L1MC4a LINE L1 -1317 6491 6167 2374 74 0 0 chr10 111688763 111689078 -33900210 - AluSx SINE Alu 0 315 1 2041 133 6 43 chr10 111689078 111689255 -33900033 - AluSq SINE Alu -1 312 130 2050 88 4 11 chr10 111689255 111689518 -33899770 - AluSp SINE Alu -7 306 46 2380 86 0 0 chr10 111689519 111689810 -33899478 - AluSg SINE Alu -19 291 1 2041 133 6 43 chr10 111689810 111689954 -33899334 - AluSq SINE Alu -182 131 1 4812 190 166 94 chr10 111689954 111689998 -33899290 - L1MC4a LINE L1 -1641 6167 6128 2087 157 0 0 chr10 111689998 111690304 -33898984 - AluJb SINE Alu -6 306 1 4812 190 166 94 chr10 111690304 111690771 -33898517 - L1MC4a LINE L1 -1680 6128 5296 1102 192 30 34 chr10 111690799 111691065 -33898223 - L1MB8 LINE L1 -12 6166 5902 406 143 9 0 chr10 111691080 111691150 -33898138 - L1MB8 LINE L1 -252 5926 5867 685 145 8 17 chr10 111691192 111691309 -33897979 - MIR SINE MIR -74 188 73 817 201 0 0 chr10 111691344 111691488 -33897800 + AluJb SINE Alu 149 292 -20 288 276 132 40 chr10 111691489 111691641 -33897647 + MIR SINE MIR 26 191 -71 4174 157 29 27 chr10 111691667 111691798 -33897490 - L1MB7 LINE L1 -12 6172 6043 2140 118 7 0 chr10 111691798 111692102 -33897186 + AluSx SINE Alu 1 306 -6 4174 157 29 27 chr10 111692102 111692484 -33896804 - L1MB7 LINE L1 -141 6043 5655 1575 146 0 79 chr10 111692484 111692814 -33896474 - AluJb SINE Alu -8 304 1 4174 157 29 27 chr10 111692814 111693072 -33896216 - L1MB7 LINE L1 -529 5655 5399 2027 117 0 0 chr10 111693072 111693355 -33895933 + AluSx SINE Alu 1 283 -29 322 285 59 38 chr10 111693737 111693923 -33895365 - L3b LINE CR1 -111 1472 1283 1348 203 58 4 chr10 111694920 111695196 -33894092 + AluJb SINE Alu 1 291 -21 260 151 0 19 chr10 111695196 111695249 -33894039 + GA-rich Low_complexity Low_complexity 1 52 0 1547 154 17 27 chr10 111695249 111695541 -33893747 + AluJo SINE Alu 1 289 -23 263 96 19 0 chr10 111695544 111695596 -33893692 + (TAGA)n Simple_repeat Simple_repeat 4 56 0 2004 140 67 20 chr10 111696563 111696921 -33892367 - THE1C LTR MaLR 0 375 1 460 264 164 13 chr10 111697933 111698092 -33891196 + MER5A DNA MER1_type 4 186 -3 2095 107 3 7 chr10 111698123 111698423 -33890865 - AluSp SINE Alu -14 299 1 207 391 35 9 chr10 111698621 111698736 -33890552 - MER5B DNA MER1_type 0 178 61 2053 117 0 3 chr10 111698736 111699026 -33890262 + AluSx SINE Alu 1 289 -23 2270 94 0 0 chr10 111699035 111699365 -33889923 + AluSp SINE Alu 1 330 0 430 251 57 86 chr10 111699764 111699907 -33889381 - MIR SINE MIR -87 175 36 1790 169 0 3 chr10 111699907 111700208 -33889080 - AluJo SINE Alu -12 300 1 430 251 57 86 chr10 111700208 111700239 -33889049 - MIR SINE MIR -226 36 6 1707 178 7 16 chr10 111700979 111701288 -33888000 + AluJo SINE Alu 1 306 -6 371 284 51 130 chr10 111701597 111701889 -33887399 - L2 LINE L2 0 3272 3004 1772 152 7 7 chr10 111702080 111702382 -33886906 - AluJb SINE Alu -9 303 2 2306 83 3 0 chr10 111703512 111703812 -33885476 - AluSx SINE Alu -11 301 1 495 163 0 0 chr10 111704310 111704396 -33884892 - AluSx SINE Alu 0 312 227 978 110 7 0 chr10 111704408 111704544 -33884744 - AluSx SINE Alu -149 163 27 1861 71 107 0 chr10 111704750 111705002 -33884286 - AluSc SINE Alu -17 292 14 442 152 0 0 chr10 111705038 111705104 -33884184 + AluS SINE Alu 1 66 -247 1260 176 5 14 chr10 111705641 111705862 -33883426 - AluJo SINE Alu -93 219 1 4033 157 51 92 chr10 111706097 111706751 -33882537 + MER21B LTR ERV1 1 610 -253 834 118 7 22 chr10 111706751 111706886 -33882402 + FLAM_C SINE Alu 1 133 0 4033 157 51 92 chr10 111706886 111707130 -33882158 + MER21B LTR ERV1 610 862 -1 926 100 18 3 chr10 111707864 111708090 -33881198 + AluJb SINE Alu 5 299 -13 829 113 0 50 chr10 111708181 111708322 -33880966 + AluJo SINE Alu 1 134 -178 1965 130 0 55 chr10 111708696 111708879 -33880409 - AluSx SINE Alu 0 312 121 186 43 0 0 chr10 111708879 111708902 -33880386 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2116 97 0 0 chr10 111708904 111709182 -33880106 - AluSg SINE Alu -31 279 2 1965 130 0 55 chr10 111709182 111709325 -33879963 - AluSx SINE Alu -192 120 1 815 139 8 0 chr10 111709326 111709448 -33879840 - AluJb SINE Alu -13 299 177 219 255 255 19 chr10 111709466 111709572 -33879716 - MIR SINE MIR -112 150 20 1845 136 0 14 chr10 111709611 111709746 -33879542 + AluSx SINE Alu 1 136 -176 2106 83 3 33 chr10 111709746 111710048 -33879240 + AluSc SINE Alu 1 293 -16 1845 136 0 14 chr10 111710048 111710199 -33879089 + AluSx SINE Alu 136 283 -29 459 0 0 0 chr10 111710202 111710253 -33879035 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 1091 76 14 0 chr10 111710651 111710795 -33878493 + AluSg/x SINE Alu 156 301 -11 2316 93 0 0 chr10 111710795 111711095 -33878193 + AluSx SINE Alu 1 300 -12 1754 130 0 0 chr10 111711857 111712103 -33877185 + AluJb SINE Alu 1 246 -66 265 224 52 0 chr10 111712134 111712192 -33877096 + AluJb SINE Alu 234 294 -8 2185 103 3 0 chr10 111712813 111713114 -33876174 - AluSx SINE Alu -10 302 1 2770 212 47 57 chr10 111717414 111717875 -33871413 + L1MD2 LINE L1 4255 4719 -1427 2119 108 10 0 chr10 111717875 111718172 -33871116 + AluSx SINE Alu 1 300 -12 2770 212 47 57 chr10 111718172 111718198 -33871090 + L1MD2 LINE L1 4719 4744 -1402 1892 79 20 0 chr10 111718198 111718452 -33870836 + AluSg SINE Alu 35 293 -17 2770 212 47 57 chr10 111718452 111718463 -33870825 + L1MD2 LINE L1 4744 4754 -1392 2010 106 28 0 chr10 111718463 111718746 -33870542 + AluSp SINE Alu 1 291 -22 2770 212 47 57 chr10 111718746 111719094 -33870194 + L1MD2 LINE L1 4754 5095 -1051 3647 173 71 30 chr10 111719177 111719534 -33869754 + L1MD2 LINE L1 5079 5420 -939 1712 126 41 4 chr10 111719534 111719805 -33869483 + AluSx SINE Alu 14 294 -18 3647 173 71 30 chr10 111719805 111720297 -33868991 + L1MD2 LINE L1 5420 5971 -388 2175 102 7 0 chr10 111720297 111720591 -33868697 + AluSx SINE Alu 1 296 -16 3647 173 71 30 chr10 111720591 111720661 -33868627 + L1MD2 LINE L1 5971 6037 -322 1099 133 6 0 chr10 111720661 111720827 -33868461 + FRAM SINE Alu 1 160 -16 1283 179 103 3 chr10 111720827 111721118 -33868170 + L1MD2 LINE L1 6035 6354 -5 1863 142 0 10 chr10 111721118 111721406 -33867882 + AluJo SINE Alu 1 285 -27 26 50 0 0 chr10 111721406 111721446 -33867842 + AT_rich Low_complexity Low_complexity 1 40 0 2037 91 4 0 chr10 111722661 111722937 -33866351 - AluY SINE Alu -30 281 5 258 298 6 63 chr10 111723867 111724025 -33865263 + HAL1b LINE L1 1193 1341 -7 340 300 84 54 chr10 111724147 111724222 -33865066 - L1ME4a LINE L1 -210 5911 5840 2358 92 0 0 chr10 111724222 111724528 -33864760 + AluSq SINE Alu 1 306 -7 564 42 0 0 chr10 111724528 111724599 -33864689 + (TA)n Simple_repeat Simple_repeat 2 72 0 340 300 84 54 chr10 111724599 111724855 -33864433 - L1ME4a LINE L1 -280 5841 5569 497 290 118 94 chr10 111725394 111725828 -33863460 + L3 LINE CR1 1083 1526 -51 1885 90 0 4 chr10 111725862 111726135 -33863153 - AluSg SINE Alu 0 308 37 254 277 27 88 chr10 111726589 111726737 -33862551 - MIR SINE MIR -56 206 68 1984 133 20 0 chr10 111727013 111727136 -33862152 + AluSx SINE Alu 1 120 -192 239 0 0 31 chr10 111727136 111727168 -33862120 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1984 133 20 0 chr10 111727168 111727344 -33861944 + AluSx SINE Alu 120 306 -6 613 197 12 189 chr10 111727360 111727604 -33861684 - MLT1E LTR MaLR -76 517 317 287 154 0 39 chr10 111727652 111727704 -33861584 - MLT1E LTR MaLR -394 260 211 2064 96 0 33 chr10 111727704 111728006 -33861282 - AluSq SINE Alu -21 292 1 2045 123 0 13 chr10 111728013 111728322 -33860966 - AluSg SINE Alu -5 305 1 3993 131 47 39 chr10 111728905 111729632 -33859656 + L1MB3 LINE L1 5448 6180 -3 231 286 68 15 chr10 111729676 111729809 -33859479 - MLT1E LTR MaLR -450 143 4 6489 192 43 67 chr10 111730047 111730142 -33859146 - L1ME4a LINE L1 -865 5281 5185 2397 55 0 0 chr10 111730142 111730434 -33858854 + AluY SINE Alu 3 294 -17 4501 136 8 23 chr10 111730434 111731205 -33858083 - L1MB3 LINE L1 -9 6174 5416 6489 192 43 67 chr10 111731205 111731244 -33858044 - L1ME4a LINE L1 -960 5186 5148 2220 87 0 7 chr10 111731244 111731542 -33857746 - AluSq SINE Alu -17 296 1 6489 192 43 67 chr10 111731542 111731863 -33857425 - L1ME4a LINE L1 -998 5148 4821 2378 63 10 0 chr10 111731863 111732162 -33857126 + AluY SINE Alu 1 302 -9 6489 192 43 67 chr10 111732162 111732632 -33856656 - L1ME4a LINE L1 -1325 4821 4342 1564 188 0 16 chr10 111732632 111732976 -33856312 - AluJo SINE Alu 0 312 1 6489 192 43 67 chr10 111732976 111733183 -33856105 - L1ME4a LINE L1 -1804 4342 4132 2279 113 0 0 chr10 111733183 111733494 -33855794 - AluSx SINE Alu -1 311 1 6489 192 43 67 chr10 111733494 111733895 -33855393 - L1ME4a LINE L1 -2014 4132 3789 2247 82 0 25 chr10 111733895 111734213 -33855075 - AluSg SINE Alu 0 310 1 6489 192 43 67 chr10 111734213 111734478 -33854810 - L1ME4a LINE L1 -2357 3789 3519 180 77 0 0 chr10 111734793 111734819 -33854469 + (TG)n Simple_repeat Simple_repeat 2 27 0 2131 98 0 3 chr10 111734968 111735263 -33854025 + AluSc SINE Alu 2 295 -14 905 48 0 0 chr10 111735272 111735376 -33853912 + U6 snRNA snRNA 1 104 -3 465 112 10 82 chr10 111736494 111736592 -33852696 + AluY SINE Alu 216 306 -5 2001 94 7 49 chr10 111736641 111736812 -33852476 - AluSx SINE Alu -17 295 141 2123 100 3 7 chr10 111736812 111737113 -33852175 - AluSg SINE Alu -10 300 1 2001 94 7 49 chr10 111737113 111737249 -33852039 - AluSx SINE Alu -171 141 1 394 292 131 7 chr10 111737312 111737449 -33851839 - MIR SINE MIR -94 168 15 2343 54 0 7 chr10 111737751 111738046 -33851242 + AluY SINE Alu 1 293 -18 942 255 33 0 chr10 111738342 111738554 -33850734 - MER58A DNA MER1_type -5 219 1 1876 152 0 0 chr10 111738964 111739253 -33850035 + AluSx SINE Alu 1 289 -23 807 144 0 124 chr10 111739877 111740071 -33849217 - AluJb SINE Alu -6 306 137 222 292 158 25 chr10 111740283 111740403 -33848885 + L2 LINE L2 3158 3293 -20 2050 133 0 0 chr10 111740694 111740988 -33848300 - AluSx SINE Alu -18 294 1 2031 86 4 7 chr10 111741036 111741353 -33847935 - AluSc SINE Alu 0 317 2 2092 156 0 0 chr10 111741628 111741929 -33847359 + AluJb SINE Alu 1 301 -11 1146 163 0 5 chr10 111742050 111742234 -33847054 + AluSg/x SINE Alu 125 307 -5 551 262 104 75 chr10 111742344 111742454 -33846834 + L1ME4a LINE L1 5561 5666 -455 2284 95 3 20 chr10 111742454 111742760 -33846528 + AluSq SINE Alu 1 301 -12 551 262 104 75 chr10 111742760 111743010 -33846278 + L1ME4a LINE L1 5666 5948 -173 2239 114 0 17 chr10 111743010 111743309 -33845979 - AluSx SINE Alu -18 294 1 551 262 104 75 chr10 111743309 111743487 -33845801 + L1ME4a LINE L1 5948 6119 -2 229 180 100 0 chr10 111744232 111744282 -33845006 + MLT1L LTR MaLR 19 73 -542 935 296 68 10 chr10 111744347 111744732 -33844556 + MLT1L LTR MaLR 209 615 0 1611 192 7 33 chr10 111745086 111745393 -33843895 + AluJo SINE Alu 1 299 -13 2154 130 3 22 chr10 111745395 111745711 -33843577 + AluSx SINE Alu 1 310 -2 503 282 101 44 chr10 111745741 111745949 -33843339 + MLT1K LTR MaLR 297 523 -65 1707 114 17 136 chr10 111745949 111746301 -33842987 - AluJb SINE Alu -2 310 1 503 282 101 44 chr10 111746301 111746340 -33842948 + MLT1K LTR MaLR 523 558 -30 1000 166 80 0 chr10 111746340 111746503 -33842785 - AluJb SINE Alu -3 309 134 1831 113 64 35 chr10 111746503 111746786 -33842502 - AluSx SINE Alu -17 295 5 315 122 0 0 chr10 111746796 111746845 -33842443 + (TTCC)n Simple_repeat Simple_repeat 1 49 0 2234 97 21 0 chr10 111746845 111747135 -33842153 - AluSx SINE Alu -16 296 1 2538 79 0 0 chr10 111748305 111748609 -33840679 - AluY SINE Alu -7 304 1 655 256 164 5 chr10 111748664 111748871 -33840417 - MIR SINE MIR -21 241 2 556 246 114 0 chr10 111748997 111749164 -33840124 + L1ME3A LINE L1 5935 6120 -50 2389 108 0 0 chr10 111749169 111749475 -33839813 - AluSq SINE Alu -7 306 1 1706 199 7 7 chr10 111749477 111749783 -33839505 - AluJb SINE Alu -6 306 1 274 282 14 78 chr10 111749798 111749832 -33839456 + MIR SINE MIR 36 71 -191 2556 67 0 0 chr10 111749832 111750130 -33839158 + AluY SINE Alu 1 298 -13 274 282 14 78 chr10 111750130 111750237 -33839051 + MIR SINE MIR 71 168 -94 1413 227 56 88 chr10 111750655 111751153 -33838135 - L1MC4 LINE L1 -1 8041 7568 1606 163 47 0 chr10 111751153 111751410 -33837878 - AluJo SINE Alu -21 291 23 1413 227 56 88 chr10 111751410 111751568 -33837720 - L1MC4 LINE L1 -474 7568 7406 2440 76 0 3 chr10 111751570 111751871 -33837417 + AluY SINE Alu 1 300 -11 731 162 14 35 chr10 111752006 111752148 -33837140 - MLT1E LTR MaLR -454 139 1 345 257 160 49 chr10 111752235 111752379 -33836909 + L1MC4a LINE L1 6308 6467 -1341 986 218 0 5 chr10 111752408 111752596 -33836692 + AluJo SINE Alu 121 307 -5 2352 82 14 3 chr10 111752737 111753029 -33836259 + AluSg SINE Alu 1 295 -15 952 174 14 0 chr10 111753032 111753176 -33836112 + AluJb SINE Alu 141 286 -26 2214 144 72 8 chr10 111753249 111753651 -33835637 - MSTC LTR MaLR 0 428 1 1715 162 17 30 chr10 111753808 111754104 -33835184 - AluJb SINE Alu -20 292 1 608 288 56 29 chr10 111754368 111754667 -33834621 - L1MC4a LINE L1 -355 5829 5531 1602 181 34 20 chr10 111754667 111754959 -33834329 - AluJo SINE Alu -16 296 1 608 288 56 29 chr10 111754959 111754978 -33834310 - L1MC4a LINE L1 -653 5531 5514 1765 115 0 0 chr10 111755032 111755267 -33834021 - AluSg/x SINE Alu -2 310 76 1780 155 43 26 chr10 111755293 111755597 -33833691 - AluJb SINE Alu -3 309 1 2532 63 0 3 chr10 111755638 111755939 -33833349 - AluY SINE Alu -11 300 1 1487 53 0 6 chr10 111755994 111756163 -33833125 + AluY SINE Alu 11 178 -133 506 65 0 0 chr10 111756163 111756240 -33833048 + AluY SINE Alu 235 311 0 2252 127 0 19 chr10 111756254 111756392 -33832896 + AluSx SINE Alu 1 140 -172 2111 125 14 0 chr10 111756392 111756680 -33832608 + AluSc SINE Alu 3 294 -15 2252 127 0 19 chr10 111756680 111756856 -33832432 + AluSx SINE Alu 140 309 -3 2386 116 7 0 chr10 111758857 111759167 -33830121 + AluSx SINE Alu 1 312 0 1509 27 11 0 chr10 111761666 111761852 -33827436 - L1PA4 LINE L1 -1 6154 5967 822 134 8 15 chr10 111762304 111762438 -33826850 - FLAM_C SINE Alu 0 133 1 577 211 136 79 chr10 111762496 111762813 -33826475 - MER113 DNA MER1_type? -180 341 7 1122 161 296 16 chr10 111763088 111763405 -33825883 - L1MB8 LINE L1 0 6178 5773 305 141 14 42 chr10 111763382 111763453 -33825835 - L1MC4a LINE L1 -670 5500 5432 * 1665 151 0 42 chr10 111763454 111763738 -33825550 - AluJb SINE Alu -2 310 39 499 97 0 142 chr10 111763763 111763846 -33825442 - L1MC4a LINE L1 -743 5441 5376 2364 98 7 0 chr10 111763846 111764142 -33825146 - AluSx SINE Alu -14 298 1 499 97 0 142 chr10 111764142 111764171 -33825117 - L1MC4a LINE L1 -808 5376 5345 557 225 75 53 chr10 111764603 111764706 -33824582 - MIR SINE MIR 0 262 163 1072 237 90 6 chr10 111764706 111765018 -33824270 - MER46C DNA MER2_type 0 338 1 557 225 75 53 chr10 111765018 111765141 -33824147 - MIR SINE MIR -99 163 31 2325 101 0 7 chr10 111766091 111766397 -33822891 - AluSx SINE Alu -8 304 1 1000 237 9 9 chr10 111766441 111766660 -33822628 - MIR SINE MIR -36 226 8 684 214 77 20 chr10 111767378 111767451 -33821837 - MER3 DNA MER1_type -1 208 141 2301 92 17 0 chr10 111767451 111767745 -33821543 + AluSp SINE Alu 1 299 -14 684 214 77 20 chr10 111767745 111767867 -33821421 - MER3 DNA MER1_type -68 141 2 620 272 53 15 chr10 111768450 111768656 -33820632 + MIR SINE MIR 49 262 0 252 395 99 0 chr10 111769209 111769371 -33819917 + L3 LINE CR1 201 378 -1199 23 0 0 0 chr10 111769371 111769394 -33819894 + AT_rich Low_complexity Low_complexity 1 23 0 2373 89 0 49 chr10 111769450 111769776 -33819512 + AluSx SINE Alu 1 310 -2 883 328 140 48 chr10 111769791 111770435 -33818853 + L3 LINE CR1 399 1101 -476 307 232 30 20 chr10 111770548 111770647 -33818641 + AluSq/x SINE Alu 37 136 -167 1311 141 15 111 chr10 111770647 111770810 -33818478 + AluSp SINE Alu 2 118 -185 2341 92 0 7 chr10 111770810 111771116 -33818172 + AluY SINE Alu 1 304 -7 1311 141 15 111 chr10 111771116 111771286 -33818002 + AluSp SINE Alu 118 303 0 277 266 88 26 chr10 111771286 111771399 -33817889 - MER5B DNA MER1_type -48 130 11 2312 117 0 7 chr10 111771933 111772242 -33817046 + AluSx SINE Alu 1 307 -5 1901 127 4 0 chr10 111772284 111772543 -33816745 + AluSx SINE Alu 40 299 -13 698 173 65 6 chr10 111773191 111773359 -33815929 + L1M4 LINE L1 4991 5168 -978 2504 51 0 7 chr10 111773364 111773660 -33815628 + AluY SINE Alu 1 294 -17 3668 167 14 22 chr10 111773660 111774428 -33814860 - L1MB3 LINE L1 -9 6174 5413 2681 47 0 0 chr10 111774464 111774760 -33814528 - AluSq SINE Alu -17 296 1 1659 249 50 0 chr10 111774764 111775261 -33814027 - L1MB3 LINE L1 -1378 4768 4247 1874 113 89 17 chr10 111775266 111775558 -33813730 - AluSp SINE Alu 0 313 1 1040 208 36 25 chr10 111775558 111775837 -33813451 - L1MB3 LINE L1 -2358 3788 3507 180 77 0 0 chr10 111776138 111776164 -33813124 + (TG)n Simple_repeat Simple_repeat 2 27 0 2070 125 0 7 chr10 111776313 111776609 -33812679 + AluSc SINE Alu 2 295 -14 830 48 0 9 chr10 111776618 111776723 -33812565 + U6 snRNA snRNA 1 104 -3 2440 66 3 13 chr10 111778716 111779018 -33810270 + AluSq SINE Alu 1 299 -14 203 256 7 51 chr10 111780511 111780648 -33808640 + CT-rich Low_complexity Low_complexity 3 133 0 2297 109 3 13 chr10 111781354 111781666 -33807622 - AluSp SINE Alu -4 309 1 261 189 18 126 chr10 111781841 111781922 -33807366 + MIR3 SINE MIR 107 174 -34 2361 89 10 3 chr10 111781922 111782225 -33807063 - AluSg SINE Alu -5 305 1 261 189 18 126 chr10 111782225 111782254 -33807034 + MIR3 SINE MIR 174 205 -3 239 354 0 62 chr10 111782613 111782709 -33806579 - L2 LINE L2 -67 3205 3116 23 33 0 0 chr10 111783672 111783702 -33805586 + AT_rich Low_complexity Low_complexity 1 30 0 225 94 0 0 chr10 111784794 111784826 -33804462 + (CA)n Simple_repeat Simple_repeat 2 33 0 189 74 0 0 chr10 111785154 111785181 -33804107 + (CCCCAG)n Simple_repeat Simple_repeat 4 30 0 252 184 0 0 chr10 111786589 111786638 -33802650 + (CA)n Simple_repeat Simple_repeat 1 49 0 223 280 29 51 chr10 111787202 111787350 -33801938 - MIR SINE MIR -56 206 68 2090 132 20 0 chr10 111787629 111787750 -33801538 + AluSx SINE Alu 3 120 -192 239 0 0 31 chr10 111787750 111787782 -33801506 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2090 132 20 0 chr10 111787782 111787963 -33801325 + AluSx SINE Alu 120 311 -1 504 153 3 18 chr10 111788106 111788142 -33801146 + L1MB8 LINE L1 5328 5363 -821 2485 74 7 0 chr10 111788142 111788438 -33800850 + AluSx SINE Alu 1 298 -14 504 153 3 18 chr10 111788438 111788521 -33800767 + L1MB8 LINE L1 5363 5441 -743 1645 155 0 42 chr10 111788546 111788830 -33800458 + AluJb SINE Alu 39 310 -2 299 155 14 42 chr10 111788831 111788902 -33800386 + L1MB8 LINE L1 5432 5500 -670 * 1135 173 94 12 chr10 111788879 111789134 -33800154 + L1MB8 LINE L1 5773 6048 -130 234 140 40 0 chr10 111789145 111789195 -33800093 + L1MB7 LINE L1 6133 6184 0 379 247 33 8 chr10 111789614 111789744 -33799544 + MIR SINE MIR 38 168 -62 220 167 37 0 chr10 111790619 111790673 -33798615 + T-rich Low_complexity Low_complexity 5 60 0 201 39 0 0 chr10 111791195 111791221 -33798067 + (TAA)n Simple_repeat Simple_repeat 2 27 0 23 0 0 0 chr10 111791225 111791248 -33798040 + AT_rich Low_complexity Low_complexity 1 23 0 248 212 76 0 chr10 111791771 111791837 -33797451 - L2 LINE L2 -2 3311 3241 180 212 44 159 chr10 111792007 111792045 -33797243 + MER5A DNA MER1_type 40 81 -108 1550 183 17 43 chr10 111792045 111792346 -33796942 + AluJb SINE Alu 9 301 -11 180 212 44 159 chr10 111792346 111792420 -33796868 + MER5A DNA MER1_type 81 139 -50 2406 91 3 0 chr10 111792749 111793046 -33796242 + AluSx SINE Alu 2 299 -13 1711 147 33 17 chr10 111793113 111793413 -33795875 + AluJb SINE Alu 2 306 -6 208 242 275 0 chr10 111795814 111795905 -33793383 + MER91A DNA MER1_type 8 123 -73 504 307 14 0 chr10 111796367 111796507 -33792781 + MIR SINE MIR 56 197 -65 456 302 78 24 chr10 111796785 111796990 -33792298 + MIR SINE MIR 9 224 -38 2085 125 0 0 chr10 111797610 111797905 -33791383 + AluSg SINE Alu 1 295 -15 1074 236 21 0 chr10 111798663 111798904 -33790384 + MER58 DNA MER1_type 33 278 -2142 2633 24 0 0 chr10 111798904 111799202 -33790086 + L1PA2 LINE L1 5858 6155 0 2328 87 0 0 chr10 111803107 111803407 -33785881 + AluSp SINE Alu 1 300 -13 295 357 30 42 chr10 111803443 111803611 -33785677 - L2 LINE L2 -11 3261 3096 248 277 55 163 chr10 111809717 111810060 -33779228 - L2 LINE L2 -36 3236 2931 273 242 81 20 chr10 111810114 111810213 -33779075 - L2 LINE L2 -597 2717 2613 2275 107 0 0 chr10 111810913 111811213 -33778075 - AluSx SINE Alu -12 300 1 279 291 6 63 chr10 111811410 111811568 -33777720 - HAL1b LINE L1 -7 1341 1193 2396 63 10 0 chr10 111812498 111812798 -33776490 + AluY SINE Alu 5 307 -4 2309 224 19 14 chr10 111812802 111813277 -33776011 - L1M4 LINE L1 -1296 4850 4369 1544 181 0 17 chr10 111813277 111813607 -33775681 - AluJo SINE Alu 0 325 1 2309 224 19 14 chr10 111813607 111813696 -33775592 - L1M4 LINE L1 -1777 4369 4282 432 0 0 0 chr10 111814207 111814255 -33775033 + (TG)n Simple_repeat Simple_repeat 2 49 0 202 71 48 48 chr10 111816433 111816517 -33772771 + (TATAA)n Simple_repeat Simple_repeat 1 84 0 331 146 0 14 chr10 111816520 111816583 -33772705 - Alu SINE Alu -258 44 1 1600 145 8 0 chr10 111816596 111816838 -33772450 + AluSx SINE Alu 1 244 -68 471 246 127 7 chr10 111816839 111816981 -33772307 - L2 LINE L2 -613 2701 2543 1838 151 3 7 chr10 111816985 111817283 -33772005 + AluJo SINE Alu 1 297 -15 255 157 59 0 chr10 111817283 111817334 -33771954 + Tigger3(Golem) DNA MER2_type 69 122 -2907 1449 142 26 0 chr10 111817346 111817579 -33771709 + Tigger3(Golem) DNA MER2_type 2789 3027 -2 666 236 108 33 chr10 111817586 111817798 -33771490 + L2 LINE L2 2287 2514 -800 277 241 161 0 chr10 111817794 111817881 -33771407 + L2 LINE L2 3123 3223 -90 * 2213 83 0 3 chr10 111817900 111818190 -33771098 + AluSg1 SINE Alu 1 289 -20 1135 178 33 0 chr10 111818209 111818239 -33771049 + AluJo SINE Alu 90 118 -194 279 0 0 0 chr10 111818239 111818270 -33771018 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 1135 178 33 0 chr10 111818270 111818453 -33770835 + AluJo SINE Alu 118 310 -2 2058 102 14 0 chr10 111818455 111818740 -33770548 + AluSg SINE Alu 1 289 -21 333 120 0 0 chr10 111819913 111819963 -33769325 + AluYa8 SINE Alu 145 194 -106 847 179 145 6 chr10 111820893 111821072 -33768216 - MER20 DNA MER1_type 0 219 16 725 206 153 0 chr10 111821246 111821435 -33767853 - MIR SINE MIR -44 218 1 1846 156 33 0 chr10 111821540 111821842 -33767446 + AluJb SINE Alu 1 312 0 2104 118 0 3 chr10 111821851 111822147 -33767141 + AluSx SINE Alu 5 299 -13 1260 177 26 51 chr10 111822149 111822348 -33766940 + L1MB7 LINE L1 5867 6057 -127 1884 105 87 0 chr10 111822348 111822625 -33766663 + AluY SINE Alu 1 301 -10 1260 177 26 51 chr10 111822625 111822736 -33766552 + L1MB7 LINE L1 6057 6169 -15 1796 112 50 0 chr10 111822736 111822995 -33766293 - AluSx SINE Alu -13 299 28 972 222 3 56 chr10 111823274 111823580 -33765708 - AluJb SINE Alu -17 295 6 1930 144 0 3 chr10 111823596 111823888 -33765400 + AluSx SINE Alu 1 291 -21 856 213 0 0 chr10 111823892 111824042 -33765246 + FAM SINE Alu 25 174 -11 2103 107 0 20 chr10 111824042 111824340 -33764948 + AluSg SINE Alu 1 292 -18 2299 85 3 3 chr10 111824345 111824651 -33764637 + AluSg SINE Alu 1 306 -4 261 57 0 0 chr10 111824719 111824754 -33764534 + Alu SINE Alu 14 48 -255 242 354 0 62 chr10 111825655 111825751 -33763537 + L2 LINE L2 3116 3205 -67 287 209 19 76 chr10 111826110 111826139 -33763149 - MIR3 SINE MIR -3 205 176 2200 98 10 3 chr10 111826139 111826446 -33762842 + AluSg SINE Alu 1 309 -1 287 209 19 76 chr10 111826446 111826521 -33762767 - MIR3 SINE MIR -32 176 107 2224 112 3 3 chr10 111826696 111827009 -33762279 + AluSp SINE Alu 1 313 0 1562 138 81 30 chr10 111827606 111827902 -33761386 - AluJo SINE Alu -1 311 1 331 206 151 0 chr10 111827964 111828037 -33761251 + L2 LINE L2 3193 3276 -37 1795 114 0 52 chr10 111828217 111828525 -33760763 + AluJb SINE Alu 1 292 -20 194 61 0 30 chr10 111829243 111829276 -33760012 + (GGA)n Simple_repeat Simple_repeat 1 32 0 23 0 0 0 chr10 111831651 111831674 -33757614 + AT_rich Low_complexity Low_complexity 1 23 0 234 239 33 76 chr10 111831716 111831782 -33757506 - MIR SINE MIR -54 208 146 2330 67 0 19 chr10 111831782 111832095 -33757193 - AluY SINE Alu -4 307 1 234 239 33 76 chr10 111832095 111832120 -33757168 - MIR SINE MIR -116 146 121 374 273 23 0 chr10 111832131 111832219 -33757069 - L1MC4 LINE L1 -1339 6703 6614 1610 166 7 11 chr10 111832320 111832597 -33756691 + AluJb SINE Alu 22 297 -15 332 227 27 0 chr10 111832732 111832807 -33756481 + MLT2F LTR ERVL 10 86 -577 861 131 24 54 chr10 111832821 111832989 -33756299 + MLT1E3 LTR MaLR 52 214 -410 536 262 36 108 chr10 111832835 111833167 -33756121 + MLT2C1 LTR ERVL 45 352 -45 * 863 206 6 6 chr10 111833215 111833375 -33755913 + FRAM SINE Alu 11 170 -6 215 236 14 0 chr10 111833377 111833449 -33755839 + (TA)n Simple_repeat Simple_repeat 2 74 0 335 270 80 61 chr10 111833462 111833625 -33755663 - L1MCa LINE L1 -4334 2092 1927 21 36 0 0 chr10 111833634 111833662 -33755626 + AT_rich Low_complexity Low_complexity 1 28 0 533 169 0 0 chr10 111833679 111833762 -33755526 + AluJ/FLAM SINE Alu 1 83 -229 251 108 0 0 chr10 111833819 111833856 -33755432 + MLT2F LTR ERVL 624 660 -3 353 331 18 24 chr10 111833960 111834129 -33755159 + L2 LINE L2 2588 2755 -559 1298 161 164 28 chr10 111834166 111834490 -33754798 - L1MCb LINE L1 -4128 2436 2069 1664 168 0 49 chr10 111834492 111834820 -33754468 - AluJb SINE Alu 0 312 1 350 120 67 53 chr10 111834821 111834896 -33754392 - L1MCb LINE L1 -4590 1974 1899 1861 139 3 44 chr10 111834897 111835214 -33754074 - AluSx SINE Alu -8 304 1 2068 114 7 0 chr10 111835224 111835521 -33753767 - AluSx SINE Alu -13 299 1 2826 93 9 52 chr10 111835794 111836234 -33753054 - L1PA13 LINE L1 0 6163 5743 2796 183 39 76 chr10 111836238 111836391 -33752897 - L1MCb LINE L1 -4851 1194 1037 2265 89 0 0 chr10 111836391 111836683 -33752605 + AluSc SINE Alu 1 292 -17 2796 183 39 76 chr10 111836683 111836769 -33752519 - L1MCb LINE L1 -5008 1037 949 189 0 0 0 chr10 111836769 111836790 -33752498 + (TTAA)n Simple_repeat Simple_repeat 3 23 0 2796 183 39 76 chr10 111836790 111837411 -33751877 - L1MCb LINE L1 -5096 949 307 1023 191 6 0 chr10 111837411 111837579 -33751709 + FAM SINE Alu 1 169 -6 1641 159 68 10 chr10 111837581 111837876 -33751412 + AluJo SINE Alu 1 312 0 2796 183 39 76 chr10 111837876 111837896 -33751392 - L1MCb LINE L1 -5739 306 430 2077 112 0 37 chr10 111837896 111838218 -33751070 - AluSg SINE Alu 0 310 1 2796 183 39 76 chr10 111838218 111838262 -33751026 - L1MCb LINE L1 -5614 431 387 219 267 38 57 chr10 111838309 111838414 -33750874 + L2 LINE L2 3159 3261 -11 744 304 18 0 chr10 111839202 111839419 -33749869 - MIR SINE MIR 0 262 42 305 275 80 107 chr10 111839644 111839982 -33749306 - L2 LINE L2 -34 3238 2910 2311 99 0 0 chr10 111839987 111840289 -33748999 + AluSx SINE Alu 1 302 -10 220 200 12 113 chr10 111840695 111840775 -33748513 - L2 LINE L2 0 3313 3242 469 192 0 0 chr10 111840795 111840868 -33748420 + AluS SINE Alu 2 74 -238 503 333 35 4 chr10 111840941 111841172 -33748116 - L2 LINE L2 -247 3066 2829 348 278 0 0 chr10 111842303 111842393 -33746895 + MIR SINE MIR 173 262 0 1085 80 0 0 chr10 111842639 111842776 -33746512 + AluSq/x SINE Alu 1 137 -176 2520 48 0 13 chr10 111842776 111843090 -33746198 + AluY SINE Alu 1 310 -1 335 311 53 46 chr10 111843408 111843559 -33745729 - L2 LINE L2 -12 3260 3109 803 181 13 7 chr10 111843894 111844043 -33745245 + MER3 DNA MER1_type 3 152 -57 924 154 14 87 chr10 111844065 111844326 -33744962 - AluJo SINE Alu -17 295 87 1214 171 0 60 chr10 111844329 111844563 -33744725 - AluJo SINE Alu -92 220 1 1204 124 5 27 chr10 111844568 111844779 -33744509 - AluSp SINE Alu 0 311 105 255 217 0 0 chr10 111844879 111844939 -33744349 + (CATA)n Simple_repeat Simple_repeat 3 62 0 2204 112 7 3 chr10 111846208 111846503 -33742785 - AluSx SINE Alu -16 296 1 1814 175 0 19 chr10 111846578 111846893 -33742395 - AluJo SINE Alu -3 309 1 481 156 13 0 chr10 111847046 111847123 -33742165 + AluS SINE Alu 2 79 -234 489 248 7 7 chr10 111847264 111847405 -33741883 + AluSp/q SINE Alu 172 312 -1 222 252 47 75 chr10 111847406 111847513 -33741775 - MIR SINE MIR -73 135 32 4510 143 29 28 chr10 111847581 111847940 -33741348 + L1MB7 LINE L1 5320 5677 -507 944 182 11 17 chr10 111847940 111848116 -33741172 + FAM SINE Alu 1 175 0 4510 143 29 28 chr10 111848116 111848238 -33741050 + L1MB7 LINE L1 5677 5797 -387 4156 164 54 61 chr10 111848238 111849199 -33740089 + LTR13 LTR ERVK 1 954 0 4510 143 29 28 chr10 111849199 111849580 -33739708 + L1MB7 LINE L1 5797 6184 0 2401 88 3 0 chr10 111849585 111849882 -33739406 + AluSx SINE Alu 1 298 -14 1917 163 7 0 chr10 111849894 111850200 -33739088 + AluJb SINE Alu 1 308 -4 808 176 23 0 chr10 111850450 111850581 -33738707 + AluJo SINE Alu 2 135 -177 1802 182 3 7 chr10 111850582 111850868 -33738420 + AluSx SINE Alu 1 285 -27 809 129 0 0 chr10 111850868 111850984 -33738304 - AluJo/FLAM SINE Alu -186 116 1 469 249 153 33 chr10 111850992 111851233 -33738055 + L1ME LINE L1 5532 5801 -320 2180 104 4 0 chr10 111851360 111851640 -33737648 - AluSg SINE Alu -29 281 1 2204 13 0 0 chr10 111851771 111852006 -33737282 - AluYa5 SINE Alu -76 235 1 1830 140 48 14 chr10 111852183 111852476 -33736812 + AluSx SINE Alu 2 304 -8 1136 172 0 0 chr10 111852993 111853167 -33736121 - FAM SINE Alu -1 174 1 1719 99 5 0 chr10 111853686 111853908 -33735380 - AluSg/x SINE Alu -5 307 85 1542 149 0 46 chr10 111853909 111854071 -33735217 - AluJb SINE Alu -19 293 146 2547 87 3 0 chr10 111854071 111854383 -33734905 - AluSp SINE Alu 0 313 1 1542 149 0 46 chr10 111854383 111854481 -33734807 - AluJb SINE Alu -166 146 45 333 350 50 19 chr10 111854818 111854978 -33734310 + L2 LINE L2 3107 3271 -1 1766 142 31 17 chr10 111855009 111855297 -33733991 + AluJb SINE Alu 1 292 -20 263 155 52 0 chr10 111856387 111856428 -33732860 + L1M3c LINE L1 1166 1212 -4929 2350 107 0 0 chr10 111856428 111856728 -33732560 + AluSx SINE Alu 1 300 -12 263 155 52 0 chr10 111856728 111856744 -33732544 + L1M3c LINE L1 1212 1226 -4915 201 393 0 0 chr10 111856986 111857070 -33732218 + MIR SINE MIR 48 131 -77 2067 136 3 13 chr10 111857311 111857619 -33731669 - AluJb SINE Alu -7 305 1 228 143 268 0 chr10 111858325 111858381 -33730907 - AluJ/FRAM SINE Alu 0 302 232 1711 188 7 17 chr10 111858389 111858681 -33730607 + AluJo SINE Alu 1 289 -23 1042 105 0 0 chr10 111858693 111858826 -33730462 + AluSq/x SINE Alu 1 133 -180 1827 142 0 4 chr10 111858829 111859097 -33730191 + AluY SINE Alu 44 310 -1 2351 122 0 0 chr10 111859102 111859414 -33729874 + AluSx SINE Alu 1 312 0 1295 113 18 91 chr10 111859420 111859641 -33729647 + AluSg/x SINE Alu 84 288 -22 1771 73 9 0 chr10 111859867 111860087 -33729201 + AluSp SINE Alu 1 222 -91 2821 13 0 13 chr10 111860232 111860548 -33728740 - AluYb8 SINE Alu -6 312 1 2495 67 0 3 chr10 111860550 111860847 -33728441 - AluY SINE Alu -15 296 1 1475 188 4 19 chr10 111860850 111861116 -33728172 - AluJo SINE Alu -21 291 30 216 135 0 0 chr10 111861198 111861235 -33728053 + (T)n Simple_repeat Simple_repeat 1 37 0 330 318 0 0 chr10 111861516 111861604 -33727684 + MIR SINE MIR 30 117 -145 624 269 149 0 chr10 111862771 111862972 -33726316 + MIR SINE MIR 20 250 -12 715 258 52 0 chr10 111863139 111863333 -33725955 + AluJo SINE Alu 6 209 -103 27 0 0 0 chr10 111863370 111863397 -33725891 + AT_rich Low_complexity Low_complexity 1 27 0 827 98 165 15 chr10 111863407 111863540 -33725748 + AluSx SINE Alu 1 153 -159 1553 163 35 11 chr10 111863642 111863709 -33725579 - L1MB7 LINE L1 -59 6125 6061 1525 163 98 4 chr10 111863709 111863973 -33725315 - AluJb SINE Alu -23 289 1 1553 163 35 11 chr10 111863973 111864221 -33725067 - L1MB7 LINE L1 -123 6061 5802 733 182 0 30 chr10 111864706 111864838 -33724450 - AluJ SINE Alu -17 295 168 1070 174 0 0 chr10 111864991 111865152 -33724136 - AluJ SINE Alu -147 165 5 2275 101 17 3 chr10 111865615 111865911 -33723377 - AluSg SINE Alu -10 300 1 1871 149 3 48 chr10 111865911 111866220 -33723068 - AluJb SINE Alu -17 295 1 229 286 20 41 chr10 111867360 111867458 -33721830 + G-rich Low_complexity Low_complexity 1 96 0 2404 99 7 0 chr10 111868204 111868506 -33720782 - AluSc SINE Alu -5 304 1 2449 150 20 0 chr10 111869889 111870288 -33719000 + L1MB5 LINE L1 5762 6168 -6 884 185 23 0 chr10 111871725 111871898 -33717390 - L1MB8 LINE L1 -183 5995 5819 2272 96 0 0 chr10 111871898 111872178 -33717110 - AluSp SINE Alu -29 284 5 329 189 27 27 chr10 111872181 111872292 -33716996 + CT-rich Low_complexity Low_complexity 3 113 0 375 155 0 0 chr10 111872344 111872402 -33716886 - MIR SINE MIR 0 262 205 435 134 0 61 chr10 111872436 111872518 -33716770 + AluS SINE Alu 2 78 -235 2053 151 0 0 chr10 111872819 111873117 -33716171 - AluSx SINE Alu -10 302 5 385 113 0 32 chr10 111873147 111873209 -33716079 + MIR SINE MIR 202 261 -1 2124 86 11 4 chr10 111877919 111878197 -33711091 - AluSx SINE Alu -22 290 11 643 146 0 208 chr10 111878202 111878271 -33711017 - AluJo SINE Alu -143 169 87 2195 141 0 0 chr10 111878271 111878583 -33710705 + AluJb SINE Alu 1 312 0 192 77 0 0 chr10 111878584 111878610 -33710678 + (TA)n Simple_repeat Simple_repeat 1 26 0 189 0 0 0 chr10 111878609 111878630 -33710658 + (GA)n Simple_repeat Simple_repeat 2 22 0 * 643 146 0 208 chr10 111878610 111878770 -33710518 - AluJo SINE Alu -224 88 2 282 295 54 62 chr10 111878858 111878987 -33710301 - L2 LINE L2 -8 3264 3137 2474 88 0 7 chr10 111878991 111879296 -33709992 + AluSp SINE Alu 1 303 -10 2245 117 0 0 chr10 111879564 111879863 -33709425 - AluSx SINE Alu -13 299 1 282 323 164 48 chr10 111880772 111880834 -33708454 - L2 LINE L2 -20 3252 3199 2126 106 42 3 chr10 111880834 111881117 -33708171 - AluSx SINE Alu -18 294 1 282 323 164 48 chr10 111881117 111881323 -33707965 - L2 LINE L2 -73 3199 2953 188 133 0 0 chr10 111881339 111881369 -33707919 - MIR SINE MIR -16 246 217 1997 151 0 0 chr10 111881492 111881858 -33707430 - AluSx SINE Alu 0 367 2 2453 77 3 0 chr10 111881966 111882263 -33707025 + AluSp SINE Alu 1 298 -15 550 275 30 24 chr10 111882268 111882435 -33706853 - MIR SINE MIR -80 182 15 1747 145 0 4 chr10 111882527 111882776 -33706512 - AluJb SINE Alu -51 261 14 2349 104 0 16 chr10 111883202 111883520 -33705768 - AluSq SINE Alu 0 313 1 350 303 41 87 chr10 111883942 111884137 -33705151 - MIR SINE MIR -48 214 29 241 307 41 54 chr10 111884193 111884383 -33704905 - MIR SINE MIR -59 149 3 1678 137 24 73 chr10 111884570 111884898 -33704390 - AluJb SINE Alu 0 312 1 2316 99 13 0 chr10 111884908 111885211 -33704077 - AluSx SINE Alu -5 307 1 1580 170 35 111 chr10 111885257 111885715 -33703573 - MER63B DNA MER1_type -13 423 1 2231 179 40 11 chr10 111885884 111886331 -33702957 + MER66B LTR ERV1 27 486 0 377 167 53 105 chr10 111886794 111886908 -33702380 + MIR3 SINE MIR 48 155 -53 1902 156 3 3 chr10 111886909 111887197 -33702091 + AluJo SINE Alu 5 292 -20 1880 133 63 27 chr10 111887447 111887747 -33701541 - AluSx SINE Alu -1 311 1 499 321 30 12 chr10 111887907 111888075 -33701213 - MER5A DNA MER1_type -18 171 1 1924 127 62 0 chr10 111888242 111888533 -33700755 - AluSx SINE Alu -3 309 1 491 281 106 6 chr10 111889249 111889409 -33699879 - HAL1 LINE L1 -1593 914 739 2027 147 0 16 chr10 111889580 111889759 -33699529 - AluJb SINE Alu 0 312 139 2206 123 0 25 chr10 111889759 111890076 -33699212 - AluSx SINE Alu -3 309 1 2027 147 0 16 chr10 111890076 111890209 -33699079 - AluJb SINE Alu -173 139 5 891 148 0 15 chr10 111890305 111890440 -33698848 + FLAM_C SINE Alu 1 133 0 569 173 91 9 chr10 111890845 111890955 -33698333 - FLAM_A SINE Alu -14 128 10 1588 183 3 39 chr10 111892312 111892624 -33696664 + AluJo SINE Alu 1 301 -11 21 0 0 0 chr10 111893276 111893297 -33695991 + AT_rich Low_complexity Low_complexity 1 21 0 2124 86 11 4 chr10 111895045 111895323 -33693965 - AluSx SINE Alu -22 290 11 577 138 0 250 chr10 111895328 111895397 -33693891 - AluJo SINE Alu -143 169 84 2207 138 0 0 chr10 111895397 111895708 -33693580 + AluJb SINE Alu 1 311 -1 210 71 0 0 chr10 111895709 111895737 -33693551 + (TA)n Simple_repeat Simple_repeat 1 28 0 577 138 0 250 chr10 111895737 111895889 -33693399 - AluJo SINE Alu -227 85 2 282 295 54 62 chr10 111895977 111896106 -33693182 - L2 LINE L2 -8 3264 3137 2465 89 0 7 chr10 111896110 111896414 -33692874 + AluSp SINE Alu 1 302 -11 2245 117 0 0 chr10 111896682 111896981 -33692307 - AluSx SINE Alu -13 299 1 282 323 164 48 chr10 111897891 111897953 -33691335 - L2 LINE L2 -20 3252 3199 2126 106 42 3 chr10 111897953 111898236 -33691052 - AluSx SINE Alu -18 294 1 282 323 164 48 chr10 111898236 111898442 -33690846 - L2 LINE L2 -73 3199 2953 188 133 0 0 chr10 111898458 111898488 -33690800 - MIR SINE MIR -16 246 217 2055 144 0 0 chr10 111898611 111898977 -33690311 - AluSx SINE Alu 0 367 2 2453 77 3 0 chr10 111899085 111899382 -33689906 + AluSp SINE Alu 1 298 -15 550 275 30 24 chr10 111899387 111899554 -33689734 - MIR SINE MIR -80 182 15 1747 145 0 4 chr10 111899646 111899895 -33689393 - AluJb SINE Alu -51 261 14 2349 104 0 16 chr10 111900321 111900639 -33688649 - AluSq SINE Alu 0 313 1 350 303 41 87 chr10 111901061 111901256 -33688032 - MIR SINE MIR -48 214 29 241 307 41 54 chr10 111901312 111901502 -33687786 - MIR SINE MIR -59 149 3 1678 137 24 73 chr10 111901689 111902017 -33687271 - AluJb SINE Alu 0 312 1 2316 99 13 0 chr10 111902027 111902330 -33686958 - AluSx SINE Alu -5 307 1 1580 170 35 111 chr10 111902376 111902834 -33686454 - MER63B DNA MER1_type -13 423 1 2231 179 40 11 chr10 111903003 111903450 -33685838 + MER66B LTR ERV1 27 486 0 377 167 53 105 chr10 111903913 111904027 -33685261 + MIR3 SINE MIR 48 155 -53 1902 156 3 3 chr10 111904028 111904316 -33684972 + AluJo SINE Alu 5 292 -20 1880 133 63 27 chr10 111904566 111904866 -33684422 - AluSx SINE Alu -1 311 1 499 321 30 12 chr10 111905026 111905194 -33684094 - MER5A DNA MER1_type -18 171 1 1663 174 30 16 chr10 111905361 111905528 -33683760 - AluJo SINE Alu -3 309 135 2530 64 0 0 chr10 111905528 111905826 -33683462 - AluY SINE Alu -13 298 1 1663 174 30 16 chr10 111905826 111905963 -33683325 - AluJo SINE Alu -177 135 1 2639 56 0 0 chr10 111906401 111906705 -33682583 - AluY SINE Alu -7 304 1 2236 115 0 6 chr10 111906995 111907308 -33681980 - AluY SINE Alu 0 311 1 827 267 14 83 chr10 111907309 111907334 -33681954 + L2 LINE L2 2519 2544 -770 1783 141 67 0 chr10 111907334 111907600 -33681688 + AluSx SINE Alu 1 289 -23 411 38 0 0 chr10 111907600 111907653 -33681635 + (CA)n Simple_repeat Simple_repeat 2 54 0 1783 141 67 0 chr10 111907653 111907669 -33681619 + AluSx SINE Alu 289 302 -10 827 267 14 83 chr10 111907669 111907848 -33681440 + L2 LINE L2 2544 2734 -580 1769 176 10 7 chr10 111907848 111908182 -33681106 + AluJb SINE Alu 1 335 0 2289 118 3 0 chr10 111908186 111908491 -33680797 + AluSp SINE Alu 1 306 -7 827 267 14 83 chr10 111908491 111908702 -33680586 + L2 LINE L2 2737 2912 -402 409 232 250 49 chr10 111908706 111908930 -33680358 + L2 LINE L2 3045 3313 0 22 0 0 0 chr10 111910494 111910516 -33678772 + AT_rich Low_complexity Low_complexity 1 22 0 2285 103 0 0 chr10 111910516 111910807 -33678481 - AluSg SINE Alu -19 291 1 2185 111 20 14 chr10 111911894 111912191 -33677097 - AluSp SINE Alu -14 299 1 1124 81 0 0 chr10 111912191 111912327 -33676961 - AluSq/x SINE Alu -177 136 1 251 326 51 0 chr10 111912339 111912437 -33676851 - L2 LINE L2 -20 3293 3191 430 253 147 0 chr10 111912861 111913011 -33676277 + MIR SINE MIR 90 261 -1 2288 96 7 0 chr10 111914611 111914914 -33674374 + AluY SINE Alu 1 305 -6 295 173 81 0 chr10 111916236 111916320 -33672968 - AluSc SINE Alu -4 295 234 5219 90 79 52 chr10 111916543 111917678 -33671610 - MER11A LTR ERVK 0 1266 1 19138 62 8 0 chr10 111917678 111920125 -33669163 - HERVK11 LTR ERVK 0 7953 5488 17275 75 4 20 chr10 111920121 111922494 -33666794 - HERVK11 LTR ERVK -5618 2335 1 * 3691 106 61 26 chr10 111922499 111923584 -33665704 - MER11A LTR ERVK -4 1232 1 2591 72 0 0 chr10 111924460 111924766 -33664522 + AluY SINE Alu 1 306 -5 2095 128 14 0 chr10 111925214 111925502 -33663786 + AluSx SINE Alu 1 292 -20 2416 146 26 119 chr10 111925920 111926334 -33662954 - MER66B LTR ERV1 0 486 35 237 33 0 0 chr10 111926334 111926364 -33662924 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 2416 146 26 119 chr10 111926364 111926382 -33662906 - MER66B LTR ERV1 -451 35 110 1600 138 9 0 chr10 111926382 111926613 -33662675 - AluSq SINE Alu -80 233 1 2416 146 26 119 chr10 111926613 111926715 -33662573 - MER66B LTR ERV1 -375 111 1 1992 129 39 0 chr10 111927445 111927731 -33661557 - AluSx SINE Alu -15 297 1 235 186 0 0 chr10 111927737 111927780 -33661508 - Alu SINE Alu -188 114 72 2055 154 3 0 chr10 111927881 111928192 -33661096 - AluJb SINE Alu 0 312 1 2010 218 31 71 chr10 111928219 111928837 -33660451 - MLT1E LTR MaLR 0 593 1 2045 190 34 113 chr10 111928890 111929109 -33660179 + L1ME1 LINE L1 5503 5738 -428 1363 174 112 28 chr10 111929109 111929396 -33659892 + AluJo SINE Alu 1 311 -1 2045 190 34 113 chr10 111929396 111929758 -33659530 + L1ME1 LINE L1 5738 6127 -39 746 108 0 128 chr10 111929758 111929787 -33659501 - FLAM_C SINE Alu -169 133 102 2274 92 0 0 chr10 111929787 111930105 -33659183 + AluSg SINE Alu 1 318 0 746 108 0 128 chr10 111930105 111930222 -33659066 - FLAM_C SINE Alu -200 102 5 2045 190 34 113 chr10 111930222 111930319 -33658969 + L1ME1 LINE L1 6127 6127 -39 2366 79 3 3 chr10 111930319 111930610 -33658678 + AluSx SINE Alu 1 291 -21 2045 190 34 113 chr10 111930610 111930634 -33658654 + L1ME1 LINE L1 6127 6151 -15 2430 84 0 0 chr10 111930842 111931139 -33658149 - AluSx SINE Alu -15 297 1 287 262 56 0 chr10 111931225 111931351 -33657937 - L1M LINE L1 -751 5411 5279 427 274 97 16 chr10 111931351 111931475 -33657813 + L2 LINE L2 3138 3271 -1 2207 109 0 0 chr10 111931479 111931797 -33657491 + AluSx SINE Alu 1 318 0 490 172 0 32 chr10 111931797 111931890 -33657398 - AluJo/FLAM SINE Alu -186 116 27 670 148 46 9 chr10 111931890 111931998 -33657290 - AluSq/x SINE Alu -200 113 2 374 337 0 0 chr10 111932053 111932148 -33657140 - L1MC4 LINE L1 -1334 6708 6614 381 303 118 7 chr10 111932153 111932305 -33656983 - MIR SINE MIR -58 204 36 763 164 0 15 chr10 111932331 111932465 -33656823 - FLAM_C SINE Alu -1 132 1 1377 76 0 61 chr10 111933096 111933294 -33655994 + AluSp SINE Alu 32 217 -96 471 89 89 0 chr10 111933295 111933430 -33655858 + (TA)n Simple_repeat Simple_repeat 2 148 0 223 279 58 29 chr10 111933484 111933588 -33655700 - MIR SINE MIR -1 261 155 2369 93 7 0 chr10 111933588 111933889 -33655399 - AluSg SINE Alu -6 304 2 798 233 108 43 chr10 111933972 111934183 -33655105 - L2 LINE L2 -4 3309 3074 2197 96 0 38 chr10 111934183 111934497 -33654791 - AluSx SINE Alu -10 302 1 798 233 108 43 chr10 111934497 111934564 -33654724 - L2 LINE L2 -239 3074 3013 900 121 23 15 chr10 111934705 111934837 -33654451 + FLAM_C SINE Alu 1 133 0 321 366 107 13 chr10 111935262 111935486 -33653802 + L2 LINE L2 2487 2731 -583 211 271 21 0 chr10 111935522 111935570 -33653718 + L2 LINE L2 3005 3053 -219 189 296 0 0 chr10 111935733 111935777 -33653511 + L2 LINE L2 3270 3313 0 723 221 26 144 chr10 111935879 111936315 -33652973 + L1MC4a LINE L1 5509 5892 -1916 2045 145 0 7 chr10 111936315 111936612 -33652676 + AluJb SINE Alu 1 295 -17 723 221 26 144 chr10 111936612 111936627 -33652661 + L1MC4a LINE L1 5892 5907 -1901 204 67 0 0 chr10 111936627 111936657 -33652631 + (GA)n Simple_repeat Simple_repeat 2 31 0 273 239 112 46 chr10 111936657 111936802 -33652486 + L1MC4a LINE L1 5878 6041 -1767 2181 148 0 0 chr10 111936802 111937113 -33652175 + AluSx SINE Alu 1 311 -1 273 239 112 46 chr10 111937113 111937164 -33652124 + L1MC4a LINE L1 6041 6087 -1721 2332 98 16 0 chr10 111937568 111937873 -33651415 - AluSx SINE Alu -2 310 1 2211 122 10 3 chr10 111937994 111938298 -33650990 - AluSx SINE Alu -6 306 1 197 320 206 0 chr10 111939226 111939323 -33649965 + L2 LINE L2 3153 3269 -3 2186 123 0 3 chr10 111939567 111939867 -33649421 + AluSq SINE Alu 1 299 -14 2295 112 3 6 chr10 111939869 111940181 -33649107 + AluSx SINE Alu 1 311 -1 684 185 8 0 chr10 111941113 111941232 -33648056 + FLAM_C SINE Alu 13 132 -11 2669 51 0 3 chr10 111941488 111941799 -33647489 + AluSg SINE Alu 1 310 0 30 45 0 0 chr10 111943031 111943075 -33646213 + AT_rich Low_complexity Low_complexity 1 44 0 770 306 177 55 chr10 111943198 111943848 -33645440 + L1M4 LINE L1 2813 3382 -2764 2314 81 0 7 chr10 111943848 111944156 -33645132 + AluSg SINE Alu 1 306 0 770 306 177 55 chr10 111944156 111944546 -33644742 + L1M4 LINE L1 3382 3999 -2147 523 287 153 0 chr10 111944565 111944722 -33644566 - MIR3 SINE MIR -5 203 23 301 338 101 36 chr10 111944784 111945003 -33644285 - L3 LINE CR1 -1 1576 1344 2512 58 3 0 chr10 111945138 111945432 -33643856 + AluY SINE Alu 1 295 -16 2217 89 10 3 chr10 111945734 111946037 -33643251 + AluSq SINE Alu 1 305 -8 1176 235 94 5 chr10 111946132 111946506 -33642782 + Charlie7 DNA MER1_type 1729 2135 -477 664 149 47 14 chr10 111946594 111946742 -33642546 + FRAM SINE Alu 1 152 -24 26 0 0 0 chr10 111946742 111946768 -33642520 + AT_rich Low_complexity Low_complexity 1 26 0 23 0 0 0 chr10 111946826 111946849 -33642439 + AT_rich Low_complexity Low_complexity 1 23 0 698 62 82 0 chr10 111946856 111946953 -33642335 + U6 snRNA snRNA 1 105 -2 1419 131 5 5 chr10 111946975 111947197 -33642091 + AluJb SINE Alu 1 222 -90 27 0 0 0 chr10 111947215 111947242 -33642046 + AT_rich Low_complexity Low_complexity 1 27 0 1034 223 68 12 chr10 111947366 111947617 -33641671 + L1ME1 LINE L1 5897 6161 -5 728 190 44 0 chr10 111948825 111948983 -33640305 + FAM SINE Alu 2 166 -9 1768 144 4 0 chr10 111949398 111949676 -33639612 + AluSx SINE Alu 1 279 -33 183 42 0 0 chr10 111949676 111949700 -33639588 + (CAAAA)n Simple_repeat Simple_repeat 1 24 0 2312 80 0 3 chr10 111949700 111950012 -33639276 + AluY SINE Alu 1 311 0 1162 73 0 0 chr10 111950012 111950206 -33639082 + AluY SINE Alu 131 324 0 2038 117 0 7 chr10 111950313 111950620 -33638668 - AluSx SINE Alu -7 305 1 232 232 89 0 chr10 111950676 111950732 -33638556 - L2 LINE L2 -67 3205 3145 273 146 0 0 chr10 111950765 111950813 -33638475 + (GGAA)n Simple_repeat Simple_repeat 2 49 0 1825 139 3 20 chr10 111951705 111952021 -33637267 - AluSx SINE Alu 0 312 1 2154 115 7 0 chr10 111952408 111952713 -33636575 + AluSp SINE Alu 1 307 -6 2283 95 0 0 chr10 111953630 111953934 -33635354 + AluSx SINE Alu 1 304 -8 595 205 16 8 chr10 111953941 111954063 -33635225 + FLAM_A SINE Alu 1 123 -10 1950 136 14 0 chr10 111954065 111954352 -33634936 - AluSg SINE Alu -19 291 1 1019 183 47 136 chr10 111954694 111955011 -33634277 - AluJo SINE Alu -12 290 2 473 341 8 13 chr10 111955558 111955756 -33633532 + MIR SINE MIR 22 216 -46 204 40 0 0 chr10 111955994 111956019 -33633269 + (A)n Simple_repeat Simple_repeat 1 25 0 678 234 0 0 chr10 111956026 111956150 -33633138 + FLAM_A SINE Alu 1 124 -9 2399 82 0 0 chr10 111956180 111956485 -33632803 - AluSg SINE Alu -5 305 1 1912 123 11 0 chr10 111957614 111957891 -33631397 - AluJb SINE Alu -32 280 1 2200 101 0 10 chr10 111957918 111958225 -33631063 + AluSx SINE Alu 1 304 -8 453 271 176 5 chr10 111958234 111958321 -33630967 - L1MC4 LINE L1 -26 8016 7945 186 103 0 0 chr10 111958321 111958350 -33630938 + (TA)n Simple_repeat Simple_repeat 1 29 0 453 271 176 5 chr10 111958350 111958461 -33630827 - L1MC4 LINE L1 -97 7945 7784 263 290 48 0 chr10 111958664 111958726 -33630562 + MIR SINE MIR 10 74 -188 414 320 111 6 chr10 111959929 111960101 -33629187 + MIR SINE MIR 59 248 -14 1490 154 38 60 chr10 111960158 111960371 -33628917 - AluJo SINE Alu 0 312 107 2420 63 0 0 chr10 111960371 111960673 -33628615 - AluY SINE Alu -9 302 1 1490 154 38 60 chr10 111960673 111960778 -33628510 - AluJo SINE Alu -205 107 1 24 0 0 0 chr10 111960818 111960842 -33628446 + AT_rich Low_complexity Low_complexity 1 24 0 850 181 13 0 chr10 111960845 111960994 -33628294 - FAM SINE Alu -12 173 23 2181 88 0 3 chr10 111961018 111961325 -33627963 - AluSx SINE Alu 0 306 1 24 77 0 0 chr10 111961486 111961538 -33627750 + AT_rich Low_complexity Low_complexity 1 52 0 2133 115 0 0 chr10 111961540 111961835 -33627453 - AluSx SINE Alu -17 295 1 1080 44 7 7 chr10 111961867 111962002 -33627286 + AluSq/x SINE Alu 3 137 -176 2200 65 14 0 chr10 111962004 111962280 -33627008 + AluSx SINE Alu 1 280 -32 213 39 0 0 chr10 111962280 111962306 -33626982 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 24 0 0 0 chr10 111963000 111963024 -33626264 + AT_rich Low_complexity Low_complexity 1 24 0 1488 145 104 4 chr10 111963188 111963457 -33625831 - AluJo SINE Alu -16 296 1 421 210 156 36 chr10 111963565 111963709 -33625579 + L1ME4a LINE L1 5787 5955 -166 1988 87 28 18 chr10 111963709 111963995 -33625293 + AluSc SINE Alu 1 289 -20 421 210 156 36 chr10 111963995 111964017 -33625271 + L1ME4a LINE L1 5955 5973 -148 1796 118 12 67 chr10 111965133 111965463 -33623825 - AluSx SINE Alu 0 312 1 1493 166 7 28 chr10 111965465 111965755 -33623533 - AluJo SINE Alu -12 300 17 602 197 77 0 chr10 111965824 111965941 -33623347 + FLAM_A SINE Alu 5 130 -3 29 0 0 0 chr10 111966070 111966099 -33623189 + AT_rich Low_complexity Low_complexity 1 29 0 1445 156 39 21 chr10 111966099 111966381 -33622907 - AluJo SINE Alu -25 287 1 261 0 0 0 chr10 111966392 111966421 -33622867 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1238 293 28 23 chr10 111966457 111966846 -33622442 + MLT1I LTR MaLR 19 409 0 25 0 0 0 chr10 111966947 111966972 -33622316 + AT_rich Low_complexity Low_complexity 1 25 0 2218 104 3 0 chr10 111966976 111967275 -33622013 - AluSx SINE Alu -12 300 1 596 153 41 0 chr10 111967355 111967453 -33621835 - U6 snRNA snRNA -5 102 1 1977 95 37 14 chr10 111967485 111967780 -33621508 + AluY SINE Alu 1 302 -9 732 271 75 19 chr10 111968277 111968491 -33620797 + MIR SINE MIR 37 262 0 1849 135 59 0 chr10 111968586 111968874 -33620414 + AluSx SINE Alu 1 305 -7 1140 195 0 5 chr10 111969025 111969235 -33620053 + AluJb SINE Alu 87 295 -17 288 0 0 0 chr10 111969236 111969268 -33620020 + (GGAA)n Simple_repeat Simple_repeat 4 35 0 482 333 0 0 chr10 111969271 111969433 -33619855 + G-rich Low_complexity Low_complexity 1 162 0 322 148 16 57 chr10 111969433 111969555 -33619733 + GA-rich Low_complexity Low_complexity 5 121 0 660 225 26 26 chr10 111969907 111970058 -33619230 + MER5A DNA MER1_type 39 189 0 234 179 0 54 chr10 111970282 111970338 -33618950 + (TG)n Simple_repeat Simple_repeat 1 53 0 2104 123 0 0 chr10 111972040 111972340 -33616948 - AluSx SINE Alu -12 300 1 1998 114 14 0 chr10 111972661 111972951 -33616337 + AluSc SINE Alu 1 294 -15 2289 94 0 0 chr10 111973533 111973842 -33615446 + AluSg SINE Alu 1 309 -1 434 276 59 59 chr10 111974595 111974765 -33614523 - L2 LINE L2 0 3272 3103 511 219 183 7 chr10 111975240 111975377 -33613911 - MER47A DNA MER2_type -204 162 2 1758 158 95 9 chr10 111976013 111976349 -33612939 - MER47A DNA MER2_type 0 366 2 1038 127 18 0 chr10 111976625 111976791 -33612497 - AluJb SINE Alu -18 294 126 199 288 38 25 chr10 111976792 111976872 -33612416 + MIR SINE MIR 58 138 -124 1056 111 0 0 chr10 111976907 111977051 -33612237 - AluSg/x SINE Alu -32 278 135 325 193 83 83 chr10 111977293 111977313 -33611975 + MIR SINE MIR 13 32 -230 1765 149 10 17 chr10 111977313 111977609 -33611679 + AluJb SINE Alu 1 294 -18 325 193 83 83 chr10 111977609 111977697 -33611591 + MIR SINE MIR 31 121 -141 1744 167 0 14 chr10 111977932 111978225 -33611063 - AluJo SINE Alu -23 289 1 2299 97 0 0 chr10 111978494 111978802 -33610486 + AluSp SINE Alu 6 313 0 962 88 0 22 chr10 111979731 111979867 -33609421 - FLAM_C SINE Alu 0 133 1 314 256 0 81 chr10 111979905 111979991 -33609297 - L2 LINE L2 -6 3307 3229 1186 273 133 53 chr10 111980016 111980573 -33608715 + L1MEd LINE L1 6 517 -5602 2154 86 7 7 chr10 111980573 111980874 -33608414 + AluSg SINE Alu 1 301 -9 1186 273 133 53 chr10 111980874 111981286 -33608002 + L1MEd LINE L1 517 1102 -5017 2164 87 27 0 chr10 111981346 111981645 -33607643 + AluY SINE Alu 1 307 -4 844 284 108 35 chr10 111981722 111982092 -33607196 - L2 LINE L2 -113 3200 2804 1923 129 0 11 chr10 111982121 111982407 -33606881 + AluSx SINE Alu 1 283 -29 188 0 0 69 chr10 111982411 111982440 -33606848 + (TAAAA)n Simple_repeat Simple_repeat 2 28 0 21 0 0 0 chr10 111982515 111982536 -33606752 + AT_rich Low_complexity Low_complexity 1 21 0 2050 82 65 3 chr10 111982974 111983267 -33606021 + AluY SINE Alu 1 311 0 1166 110 12 0 chr10 111983267 111983430 -33605858 + AluSg/x SINE Alu 134 298 -14 749 314 20 16 chr10 111983441 111983693 -33605595 - MIR SINE MIR -3 259 7 203 348 87 26 chr10 111984566 111984681 -33604607 - L2 LINE L2 -5 3267 3146 2353 74 0 0 chr10 111985292 111985590 -33603698 - AluY SINE Alu -13 298 1 1962 110 62 0 chr10 111986020 111986311 -33602977 - AluSx SINE Alu -3 309 1 684 301 42 9 chr10 111986502 111986718 -33602570 - MIR SINE MIR -2 260 38 514 236 118 82 chr10 111986728 111986948 -33602340 - MIR SINE MIR -7 255 28 397 289 197 0 chr10 111986969 111987121 -33602167 + MER5A DNA MER1_type 8 189 0 238 306 0 44 chr10 111987191 111987374 -33601914 + C-rich Low_complexity Low_complexity 5 179 0 * 262 291 10 10 chr10 111987290 111987393 -33601895 + CT-rich Low_complexity Low_complexity 2 104 0 295 204 7 73 chr10 111987544 111987681 -33601607 + CT-rich Low_complexity Low_complexity 3 130 0 1374 143 9 84 chr10 111988395 111988716 -33600572 - AluSq SINE Alu -10 303 7 1490 153 0 12 chr10 111988915 111989170 -33600118 - AluJb SINE Alu -7 305 54 22 0 0 0 chr10 111989561 111989583 -33599705 + AT_rich Low_complexity Low_complexity 1 22 0 2126 103 3 0 chr10 111989583 111989899 -33599389 + AluSq SINE Alu 1 317 0 2223 90 3 3 chr10 111991007 111991307 -33597981 - AluSx SINE Alu -12 300 1 735 174 138 36 chr10 111992113 111992308 -33596980 + MER58C DNA MER1_type 1 215 0 1097 93 0 7 chr10 111992342 111992492 -33596796 + AluSq/x SINE Alu 3 151 -162 2235 69 10 0 chr10 111992593 111992883 -33596405 - AluY SINE Alu -18 293 1 2101 113 17 0 chr10 111992883 111993183 -33596105 - AluSx SINE Alu -7 305 1 2090 138 0 0 chr10 111993184 111993495 -33595793 - AluJb SINE Alu -1 311 1 1098 145 23 72 chr10 111994231 111994452 -33594836 + AluJo SINE Alu 1 210 -102 180 179 0 0 chr10 111994477 111994516 -33594772 + A-rich Low_complexity Low_complexity 1 39 0 470 273 0 9 chr10 111994534 111994644 -33594644 + L2 LINE L2 3205 3313 0 1878 125 0 14 chr10 111995480 111995768 -33593520 + AluJb SINE Alu 24 307 -5 2166 103 17 0 chr10 111998188 111998489 -33590799 - AluSx SINE Alu -6 306 1 235 266 170 11 chr10 111998623 111998717 -33590571 + MIR3 SINE MIR 15 123 -85 201 311 0 16 chr10 111999196 111999257 -33590031 + L3 LINE CR1 1514 1573 -4 252 250 97 0 chr10 111999520 111999592 -33589696 - MIR SINE MIR -92 170 92 631 101 0 0 chr10 111999812 111999901 -33589387 - AluSg1 SINE Alu -219 90 2 364 203 14 0 chr10 112000158 112000227 -33589061 - FLAM SINE Alu -1 132 63 1919 112 20 3 chr10 112000377 112000672 -33588616 - AluSx SINE Alu -12 300 1 1702 177 3 3 chr10 112000863 112001162 -33588126 - AluJb SINE Alu -13 299 1 317 264 201 25 chr10 112001908 112002067 -33587221 + MER5A DNA MER1_type 3 189 0 2213 86 0 16 chr10 112002981 112003285 -33586003 + AluY SINE Alu 1 299 -12 1969 123 10 19 chr10 112003295 112003604 -33585684 + AluSx SINE Alu 2 307 -5 833 167 0 0 chr10 112003608 112003740 -33585548 + FLAM_C SINE Alu 2 133 -10 2516 58 0 0 chr10 112003744 112004053 -33585235 + AluY SINE Alu 2 310 -1 1025 189 13 48 chr10 112004640 112004867 -33584421 - MER20 DNA MER1_type 0 219 1 243 0 0 0 chr10 112006229 112006256 -33583032 + (A)n Simple_repeat Simple_repeat 1 27 0 1685 143 21 18 chr10 112006303 112006583 -33582705 + AluSq SINE Alu 1 281 -32 303 286 93 13 chr10 112006950 112007130 -33582158 + MIR SINE MIR 5 199 -53 235 319 44 74 chr10 112007796 112007931 -33581357 + L2 LINE L2 3119 3249 -23 327 301 41 41 chr10 112008540 112008686 -33580602 + L2 LINE L2 2953 3098 -174 335 177 31 42 chr10 112008762 112008858 -33580430 + MER5A DNA MER1_type 8 102 -87 1444 133 0 18 chr10 112008870 112009095 -33580193 + AluSx SINE Alu 1 221 -91 207 338 20 13 chr10 112009377 112009528 -33579760 + CT-rich Low_complexity Low_complexity 3 154 0 1466 145 104 4 chr10 112009679 112009948 -33579340 + AluJo SINE Alu 1 296 -16 24 0 0 0 chr10 112010112 112010136 -33579152 + AT_rich Low_complexity Low_complexity 1 24 0 213 39 0 0 chr10 112010830 112010856 -33578432 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 2100 91 14 0 chr10 112010856 112011132 -33578156 - AluSx SINE Alu -32 280 1 2001 102 39 3 chr10 112011133 112011416 -33577872 - AluSx SINE Alu -19 293 1 881 133 6 22 chr10 112012105 112012285 -33577003 + (TTCC)n Simple_repeat Simple_repeat 1 177 0 2312 93 0 0 chr10 112012315 112012617 -33576671 - AluSp SINE Alu -7 306 5 353 190 26 26 chr10 112012620 112012736 -33576552 + CT-rich Low_complexity Low_complexity 3 118 0 379 155 0 0 chr10 112012788 112012846 -33576442 - MIR SINE MIR 0 262 205 420 134 0 61 chr10 112012880 112012962 -33576326 + AluS SINE Alu 2 78 -234 1878 154 0 0 chr10 112013263 112013561 -33575727 - AluSx SINE Alu -10 302 5 388 113 0 32 chr10 112013591 112013653 -33575635 + MIR SINE MIR 202 261 -1 1991 86 11 4 chr10 112018364 112018642 -33570646 - AluSx SINE Alu -22 290 11 282 163 20 0 chr10 112018647 112018696 -33570592 - AluSp SINE Alu -134 169 120 1872 127 14 0 chr10 112018716 112018992 -33570296 + AluSx SINE Alu 1 280 -32 213 39 0 0 chr10 112018992 112019018 -33570270 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 24 0 0 0 chr10 112019712 112019736 -33569552 + AT_rich Low_complexity Low_complexity 1 24 0 1488 145 104 4 chr10 112019900 112020169 -33569119 - AluJo SINE Alu -16 296 1 421 210 156 36 chr10 112020277 112020421 -33568867 + L1ME4a LINE L1 5787 5955 -166 1975 91 28 18 chr10 112020421 112020707 -33568581 + AluSc SINE Alu 1 289 -20 421 210 156 36 chr10 112020707 112020729 -33568559 + L1ME4a LINE L1 5955 5973 -148 1796 118 12 67 chr10 112021845 112022175 -33567113 - AluSx SINE Alu 0 312 1 1493 166 7 28 chr10 112022177 112022467 -33566821 - AluJo SINE Alu -12 300 17 602 197 77 0 chr10 112022536 112022653 -33566635 + FLAM_A SINE Alu 5 130 -3 29 0 0 0 chr10 112022782 112022811 -33566477 + AT_rich Low_complexity Low_complexity 1 29 0 1445 156 39 21 chr10 112022811 112023093 -33566195 - AluJo SINE Alu -25 287 1 261 0 0 0 chr10 112023104 112023133 -33566155 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1238 293 28 23 chr10 112023169 112023558 -33565730 + MLT1I LTR MaLR 19 409 0 25 0 0 0 chr10 112023659 112023684 -33565604 + AT_rich Low_complexity Low_complexity 1 25 0 2218 104 3 0 chr10 112023688 112023987 -33565301 - AluSx SINE Alu -12 300 1 596 153 41 0 chr10 112024067 112024165 -33565123 - U6 snRNA snRNA -5 102 1 1977 95 37 14 chr10 112024197 112024492 -33564796 + AluY SINE Alu 1 302 -9 732 271 75 19 chr10 112024989 112025203 -33564085 + MIR SINE MIR 37 262 0 2354 92 0 0 chr10 112025298 112025604 -33563684 + AluSx SINE Alu 1 306 -6 1235 184 59 16 chr10 112025611 112025866 -33563422 + AluJo SINE Alu 1 266 -46 906 112 0 14 chr10 112026334 112026477 -33562811 + AluSg/x SINE Alu 164 304 -6 2022 98 27 114 chr10 112026518 112026708 -33562580 - L1MA8 LINE L1 -3 6288 6156 2167 108 16 3 chr10 112026708 112027014 -33562274 - AluSx SINE Alu -2 310 1 2022 98 27 114 chr10 112027014 112027263 -33562025 - L1MA8 LINE L1 -135 6156 5887 2121 111 0 0 chr10 112027288 112027586 -33561702 - AluSq SINE Alu -15 298 1 2682 154 22 36 chr10 112027591 112028059 -33561229 - L1MA4 LINE L1 -4 6296 5823 216 0 0 0 chr10 112028059 112028083 -33561205 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1921 83 3 90 chr10 112028083 112028256 -33561032 - AluSx SINE Alu -27 285 149 2831 0 0 0 chr10 112028256 112028567 -33560721 - AluYa5 SINE Alu 0 311 1 1921 83 3 90 chr10 112028567 112028705 -33560583 - AluSx SINE Alu -163 149 1 2682 154 22 36 chr10 112028705 112028786 -33560502 - L1MA4 LINE L1 -475 5825 5754 4118 163 49 106 chr10 112028786 112029064 -33560224 - L1 LINE L1 -2871 4694 4402 2149 86 24 7 chr10 112029064 112029356 -33559932 - AluSg SINE Alu -13 297 1 1565 155 41 0 chr10 112029357 112029628 -33559660 - AluJb SINE Alu -3 309 28 4118 163 49 106 chr10 112029628 112030520 -33558768 - L1 LINE L1 -3162 4403 3589 450 197 56 42 chr10 112030957 112031027 -33558261 - L1 LINE L1 -3960 3605 3537 3171 159 9 30 chr10 112031027 112031152 -33558136 - L1MA4 LINE L1 -4 6296 6170 186 43 0 0 chr10 112031152 112031175 -33558113 + (TTTTC)n Simple_repeat Simple_repeat 5 27 0 2148 95 3 0 chr10 112031176 112031459 -33557829 - AluSq SINE Alu -29 284 1 3171 159 9 30 chr10 112031459 112031590 -33557698 - L1MA4 LINE L1 -130 6170 6038 279 0 0 0 chr10 112031590 112031621 -33557667 + (TA)n Simple_repeat Simple_repeat 1 31 0 2338 59 0 33 chr10 112031621 112031928 -33557360 - AluY SINE Alu -14 297 1 3171 159 9 30 chr10 112031928 112032322 -33556966 - L1MA4 LINE L1 -260 6040 5656 450 197 56 42 chr10 112032322 112032393 -33556895 - L1 LINE L1 -4028 3537 3462 2023 108 0 14 chr10 112032429 112032716 -33556572 - AluSg SINE Alu -27 283 1 2352 63 0 31 chr10 112032723 112033040 -33556248 - AluY SINE Alu -4 307 1 1063 71 0 7 chr10 112033040 112033180 -33556108 - L1MA4 LINE L1 -639 5661 5523 2163 99 0 7 chr10 112033449 112033751 -33555537 - AluSx SINE Alu -12 300 1 1939 156 14 23 chr10 112033752 112034098 -33555190 - MER50 LTR ERV1 -391 343 1 6051 116 26 35 chr10 112034098 112034404 -33554884 + MER4B-int LTR ERV1 5325 5632 -1126 1827 160 6 10 chr10 112034404 112034717 -33554571 + AluJb SINE Alu 1 312 0 6051 116 26 35 chr10 112034717 112035426 -33553862 + MER4B-int LTR ERV1 5632 6330 -428 1882 99 7 38 chr10 112035432 112035770 -33553518 + AluSx SINE Alu 1 329 0 1399 137 19 95 chr10 112035829 112036077 -33553211 + MER4B-int LTR ERV1 6365 6630 -665 1810 134 0 14 chr10 112036077 112036224 -33553064 - AluSx SINE Alu -32 280 137 2184 109 0 16 chr10 112036224 112036537 -33552751 - AluSg SINE Alu -2 308 1 1810 134 0 14 chr10 112036537 112036673 -33552615 - AluSx SINE Alu -175 137 1 1399 137 19 95 chr10 112036673 112036883 -33552405 + MER4B-int LTR ERV1 6630 7119 -176 2359 78 3 0 chr10 112036883 112037192 -33552096 + AluSg SINE Alu 1 310 0 3311 123 8 73 chr10 112037195 112037799 -33551489 + MER4B LTR ERV1 10 574 -36 1403 112 4 42 chr10 112037831 112037935 -33551353 - L1M4c LINE L1 -4211 2173 2067 2072 106 0 16 chr10 112037935 112038238 -33551050 - AluSx SINE Alu -12 300 3 1403 112 4 42 chr10 112038238 112038392 -33550896 - L1M4c LINE L1 -4317 2067 1925 288 113 0 0 chr10 112038441 112038494 -33550794 + AluSp/q SINE Alu 251 303 0 2316 88 0 0 chr10 112038518 112038815 -33550473 - AluSp SINE Alu -16 297 1 1747 142 0 4 chr10 112038815 112039090 -33550198 + AluSx SINE Alu 27 300 -12 2273 61 3 14 chr10 112039266 112039563 -33549725 + AluSg1 SINE Alu 1 294 -15 2664 20 0 3 chr10 112039846 112040152 -33549136 + AluY SINE Alu 6 310 -1 30 45 0 0 chr10 112041384 112041428 -33547860 + AT_rich Low_complexity Low_complexity 1 44 0 708 298 200 54 chr10 112041551 112042202 -33547086 + L1M4 LINE L1 2813 3368 -2778 2064 85 11 7 chr10 112042202 112042507 -33546781 + AluSg SINE Alu 1 306 0 708 298 200 54 chr10 112042507 112042853 -33546435 + L1M4 LINE L1 3368 3957 -2189 525 287 153 0 chr10 112042916 112043073 -33546215 - MIR3 SINE MIR -5 203 23 297 338 101 36 chr10 112043135 112043354 -33545934 - L3 LINE CR1 -1 1576 1344 2249 97 0 0 chr10 112043574 112043874 -33545414 - AluSx SINE Alu -12 300 1 2154 115 7 0 chr10 112044791 112045096 -33544192 - AluSp SINE Alu -6 307 1 1825 139 3 20 chr10 112045483 112045799 -33543489 + AluSx SINE Alu 1 312 0 273 146 0 0 chr10 112046691 112046739 -33542549 + (TTCC)n Simple_repeat Simple_repeat 2 49 0 232 232 89 0 chr10 112046772 112046828 -33542460 + L2 LINE L2 3145 3205 -67 1940 119 0 7 chr10 112046884 112047177 -33542111 + AluSx SINE Alu 1 291 -21 355 23 0 0 chr10 112047295 112047338 -33541950 + (TTTTG)n Simple_repeat Simple_repeat 3 45 0 1161 73 0 0 chr10 112047338 112047489 -33541799 - AluY SINE Alu -1 323 131 2312 80 0 3 chr10 112047489 112047801 -33541487 - AluY SINE Alu 0 311 1 183 42 0 0 chr10 112047801 112047825 -33541463 + (TTTTG)n Simple_repeat Simple_repeat 1 24 0 1768 144 4 0 chr10 112047825 112048103 -33541185 - AluSx SINE Alu -33 279 1 728 190 44 0 chr10 112048518 112048676 -33540612 - FAM SINE Alu -9 166 2 1034 223 68 12 chr10 112049884 112050135 -33539153 - L1ME1 LINE L1 -5 6161 5897 27 0 0 0 chr10 112050259 112050286 -33539002 + AT_rich Low_complexity Low_complexity 1 27 0 1419 131 5 5 chr10 112050304 112050526 -33538762 - AluJb SINE Alu -90 222 1 698 62 82 0 chr10 112050548 112050645 -33538643 - U6 snRNA snRNA -2 105 1 23 0 0 0 chr10 112050652 112050675 -33538613 + AT_rich Low_complexity Low_complexity 1 23 0 26 0 0 0 chr10 112050733 112050759 -33538529 + AT_rich Low_complexity Low_complexity 1 26 0 664 149 47 14 chr10 112050759 112050907 -33538381 - AluJo SINE Alu -24 288 136 1176 235 94 5 chr10 112050995 112051369 -33537919 - Charlie7 DNA MER1_type -477 2135 1729 2208 89 10 3 chr10 112051464 112051766 -33537522 - AluSq SINE Alu -9 304 1 2329 68 3 0 chr10 112052068 112052362 -33536926 - AluY SINE Alu -16 295 1 818 148 0 22 chr10 112052364 112052499 -33536789 - AluJo SINE Alu -170 132 1 2492 56 0 0 chr10 112052937 112053241 -33536047 - AluY SINE Alu -7 304 1 1600 103 25 0 chr10 112053531 112053773 -33535515 - AluY SINE Alu 0 311 64 577 171 57 9 chr10 112054046 112054151 -33535137 - AluSq/x SINE Alu -202 111 2 423 219 75 2 chr10 112054185 112054297 -33534991 + L1MC4 LINE L1 1958 6983 -1339 371 337 0 0 chr10 112054206 112054301 -33534987 - L1MC4 LINE L1 -1334 6708 6614 * 386 303 118 7 chr10 112054306 112054458 -33534830 - MIR SINE MIR -58 204 36 744 164 0 15 chr10 112054484 112054618 -33534670 - FLAM_C SINE Alu -1 132 1 1286 76 0 61 chr10 112055249 112055447 -33533841 + AluSp SINE Alu 32 217 -96 471 89 89 0 chr10 112055448 112055583 -33533705 + (TA)n Simple_repeat Simple_repeat 1 147 0 232 279 58 29 chr10 112055637 112055741 -33533547 - MIR SINE MIR -1 261 155 2221 93 7 0 chr10 112055741 112056042 -33533246 - AluSg SINE Alu -6 304 2 803 233 108 43 chr10 112056125 112056336 -33532952 - L2 LINE L2 -4 3309 3074 2049 96 0 38 chr10 112056336 112056650 -33532638 - AluSx SINE Alu -10 302 1 803 233 108 43 chr10 112056650 112056717 -33532571 - L2 LINE L2 -239 3074 3013 885 121 23 15 chr10 112056858 112056990 -33532298 + FLAM_C SINE Alu 1 133 0 318 366 107 13 chr10 112057415 112057639 -33531649 + L2 LINE L2 2487 2731 -583 212 271 21 0 chr10 112057675 112057723 -33531565 + L2 LINE L2 3005 3053 -219 194 296 0 0 chr10 112057886 112057930 -33531358 + L2 LINE L2 3270 3313 0 799 221 26 144 chr10 112058032 112058468 -33530820 + L1MC4a LINE L1 5509 5892 -1916 1899 145 0 7 chr10 112058468 112058765 -33530523 + AluJb SINE Alu 1 295 -17 799 221 26 144 chr10 112058765 112058780 -33530508 + L1MC4a LINE L1 5892 5907 -1901 204 67 0 0 chr10 112058780 112058810 -33530478 + (GA)n Simple_repeat Simple_repeat 2 31 0 308 239 112 46 chr10 112058810 112058955 -33530333 + L1MC4a LINE L1 5878 6041 -1767 2022 148 0 0 chr10 112058955 112059266 -33530022 + AluSx SINE Alu 1 311 -1 308 239 112 46 chr10 112059266 112059317 -33529971 + L1MC4a LINE L1 6041 6087 -1721 2180 98 16 0 chr10 112059721 112060026 -33529262 - AluSx SINE Alu -2 310 1 2059 122 10 3 chr10 112060147 112060451 -33528837 - AluSx SINE Alu -6 306 1 189 320 206 0 chr10 112061379 112061476 -33527812 + L2 LINE L2 3153 3269 -3 2039 123 0 3 chr10 112061720 112062020 -33527268 + AluSq SINE Alu 1 299 -14 2124 115 3 6 chr10 112062022 112062334 -33526954 + AluSx SINE Alu 1 311 -1 671 185 8 0 chr10 112063266 112063385 -33525903 + FLAM_C SINE Alu 13 132 -11 2319 75 0 0 chr10 112063641 112063946 -33525342 + AluY SINE Alu 1 305 -6 226 50 0 50 chr10 112063957 112063997 -33525291 + Alu SINE Alu 96 133 0 2062 110 0 17 chr10 112064619 112064920 -33524368 - AluSx SINE Alu -16 296 1 1588 202 0 3 chr10 112064922 112065219 -33524069 - AluSx SINE Alu -16 296 1 559 236 153 25 chr10 112065243 112065446 -33523842 - MIR SINE MIR -28 234 6 1728 151 33 10 chr10 112065472 112065777 -33523511 - AluJo SINE Alu 0 312 1 21 0 0 0 chr10 112065794 112065815 -33523473 + AT_rich Low_complexity Low_complexity 1 21 0 7543 42 7 0 chr10 112066193 112067233 -33522055 + L1P2 LINE L1 4443 5491 -663 943 99 23 0 chr10 112067233 112067364 -33521924 + AluSg SINE Alu 1 134 -176 2378 59 0 7 chr10 112067364 112067667 -33521621 + AluY SINE Alu 1 301 -10 5445 47 0 21 chr10 112067667 112068344 -33520944 + L1PA6 LINE L1 5481 6143 -11 22 0 0 0 chr10 112068344 112068366 -33520922 + AT_rich Low_complexity Low_complexity 1 22 0 2331 74 0 13 chr10 112068378 112068688 -33520600 + AluSx SINE Alu 1 306 -6 2348 74 3 0 chr10 112069296 112069594 -33519694 - AluSp SINE Alu -14 299 1 2295 97 7 0 chr10 112069818 112070128 -33519160 - AluSx SINE Alu 0 312 1 1740 139 54 0 chr10 112070295 112070590 -33518698 - AluJb SINE Alu -1 311 1 397 313 9 26 chr10 112070817 112070932 -33518356 + MIR SINE MIR 19 131 -131 850 220 6 6 chr10 112070932 112071105 -33518183 - FRAM SINE Alu -9 167 1 430 250 14 64 chr10 112071105 112071129 -33518159 + MIR SINE MIR 127 151 -111 2190 89 0 0 chr10 112071129 112071448 -33517840 + AluY SINE Alu 1 319 0 430 250 14 64 chr10 112071448 112071562 -33517726 + MIR SINE MIR 151 259 -3 335 252 111 59 chr10 112071806 112071941 -33517347 - L1ME4a LINE L1 -86 6035 5894 966 212 0 13 chr10 112071965 112072191 -33517097 - AluJo SINE Alu -1 311 89 477 138 0 0 chr10 112072191 112072256 -33517032 - AluSg/x SINE Alu -59 250 186 1928 108 58 0 chr10 112072256 112072534 -33516754 - AluSq SINE Alu -17 296 3 834 130 0 8 chr10 112073137 112073260 -33516028 + FLAM_C SINE Alu 1 122 -11 27 0 0 0 chr10 112073261 112073288 -33516000 + AT_rich Low_complexity Low_complexity 1 27 0 314 325 80 25 chr10 112073351 112073473 -33515815 + L1ME LINE L1 5370 5484 -678 1450 78 22 30 chr10 112073473 112073704 -33515584 + L1PA10 LINE L1 5940 6168 0 314 325 80 25 chr10 112073704 112073994 -33515294 + L1ME LINE L1 5484 5817 -345 387 0 0 0 chr10 112074049 112074092 -33515196 + (TG)n Simple_repeat Simple_repeat 2 44 0 1942 149 0 0 chr10 112075587 112075889 -33513399 - AluSx SINE Alu -10 302 1 434 238 184 12 chr10 112076027 112076149 -33513139 + MIR SINE MIR 63 223 -39 1358 188 15 100 chr10 112076149 112076548 -33512740 + MLT1A1 LTR MaLR 1 365 0 434 238 184 12 chr10 112076548 112076593 -33512695 + MIR SINE MIR 223 259 -3 1854 114 14 4 chr10 112077709 112077990 -33511298 + AluSx SINE Alu 1 284 -28 185 138 0 0 chr10 112078048 112078077 -33511211 - L2 LINE L2 -13 3300 3272 1038 218 4 24 chr10 112078365 112078613 -33510675 - AluJo SINE Alu -69 243 1 1947 217 38 36 chr10 112078634 112079087 -33510201 - L1ME1 LINE L1 -4 6162 5706 2011 105 3 0 chr10 112079087 112079372 -33509916 + AluSx SINE Alu 1 286 -26 1947 217 38 36 chr10 112079372 112079449 -33509839 - L1ME1 LINE L1 -460 5706 5631 1962 132 6 3 chr10 112079654 112079965 -33509323 + AluSx SINE Alu 1 312 0 1790 128 0 78 chr10 112080445 112080764 -33508524 + AluSx SINE Alu 1 294 -18 266 85 0 43 chr10 112080890 112080930 -33508358 + AluJo/FLAM SINE Alu 90 124 -178 2304 103 0 0 chr10 112080930 112081240 -33508048 - AluSg SINE Alu 0 310 1 24 0 0 0 chr10 112081246 112081270 -33508018 + AT_rich Low_complexity Low_complexity 1 24 0 301 169 85 0 chr10 112081545 112081604 -33507684 - L2 LINE L2 -1 3312 3249 595 149 0 0 chr10 112081817 112081904 -33507384 + FRAM SINE Alu 77 163 -13 749 186 0 0 chr10 112082357 112082475 -33506813 - FLAM_A SINE Alu -13 129 12 458 273 7 40 chr10 112082552 112082702 -33506586 + MIR3 SINE MIR 36 180 -28 784 223 84 73 chr10 112082742 112082820 -33506468 + MER102a DNA MER1_type 54 130 -1287 2247 80 30 0 chr10 112082820 112083119 -33506169 + AluSg SINE Alu 1 308 -2 234 0 0 0 chr10 112083119 112083145 -33506143 + (TA)n Simple_repeat Simple_repeat 2 27 0 784 223 84 73 chr10 112083145 112083338 -33505950 + MER102a DNA MER1_type 129 329 -1 1795 153 0 3 chr10 112084087 112084387 -33504901 - AluJo SINE Alu -13 299 1 2117 130 0 0 chr10 112084555 112084854 -33504434 + AluSx SINE Alu 5 303 -9 256 256 8 77 chr10 112084981 112085025 -33504263 - MER94 DNA DNA -20 114 69 2117 114 0 0 chr10 112085025 112085322 -33503966 - AluSx SINE Alu -15 297 1 256 256 8 77 chr10 112085322 112085394 -33503894 - MER94 DNA DNA -65 69 6 2039 109 20 3 chr10 112086106 112086410 -33502878 - AluSg SINE Alu -1 309 1 996 177 119 108 chr10 112086439 112086598 -33502690 + MLT1B LTR MaLR 7 163 -227 2406 63 0 19 chr10 112086598 112086915 -33502373 + AluY SINE Alu 1 311 0 996 177 119 108 chr10 112086915 112087099 -33502189 + MLT1B LTR MaLR 163 354 -36 1897 114 3 49 chr10 112087104 112087429 -33501859 - AluSx SINE Alu -2 310 1 2742 96 33 8 chr10 112087430 112087824 -33501464 + MLT2A1 LTR ERVL 1 404 -40 215 39 0 154 chr10 112087832 112087910 -33501378 + (TA)n Simple_repeat Simple_repeat 1 66 0 348 163 0 64 chr10 112087934 112088075 -33501213 + (TA)n Simple_repeat Simple_repeat 1 132 0 284 82 122 0 chr10 112088078 112088127 -33501161 + MLT2A1 LTR ERVL 390 444 0 246 208 0 0 chr10 112088127 112088171 -33501117 + MLT1B LTR MaLR 331 374 0 25 0 0 0 chr10 112088594 112088619 -33500669 + AT_rich Low_complexity Low_complexity 1 25 0 1997 111 14 0 chr10 112089779 112090067 -33499221 - AluSx SINE Alu -20 292 1 1883 129 20 13 chr10 112090068 112090371 -33498917 - AluJo SINE Alu -7 305 1 914 175 0 35 chr10 112090411 112090582 -33498706 + FRAM SINE Alu 1 164 -12 2129 96 6 37 chr10 112091192 112091515 -33497773 + AluSq SINE Alu 1 313 0 21 0 0 0 chr10 112091684 112091705 -33497583 + AT_rich Low_complexity Low_complexity 1 21 0 1495 143 71 15 chr10 112092281 112092547 -33496741 + AluJb SINE Alu 1 281 -31 1919 126 0 39 chr10 112092585 112092894 -33496394 + AluSx SINE Alu 1 297 -15 430 79 26 0 chr10 112092894 112092970 -33496318 + (TA)n Simple_repeat Simple_repeat 2 79 0 1057 269 84 41 chr10 112092975 112093595 -33495693 - L2 LINE L2 -48 3265 2607 2235 44 40 10 chr10 112093724 112094022 -33495266 - AluY SINE Alu -4 307 1 207 108 27 0 chr10 112095468 112095505 -33493783 + (CTG)n Simple_repeat Simple_repeat 3 40 0 23 54 0 0 chr10 112095716 112095753 -33493535 + GC_rich Low_complexity Low_complexity 1 37 0 1880 157 13 3 chr10 112099509 112099815 -33489473 + AluJb SINE Alu 1 309 -3 332 141 0 78 chr10 112099974 112100038 -33489250 - FLAM SINE Alu -1 132 76 543 296 108 9 chr10 112100151 112100364 -33488924 - MIR SINE MIR -27 235 2 753 144 0 89 chr10 112101474 112101620 -33487668 - FLAM_C SINE Alu 0 133 1 192 128 43 85 chr10 112101780 112101827 -33487461 - MIR3 SINE MIR -13 195 151 2420 96 3 0 chr10 112101865 112102177 -33487111 + AluSp SINE Alu 1 313 0 307 263 46 72 chr10 112102320 112102472 -33486816 - MIR3 SINE MIR -49 159 12 24 32 0 0 chr10 112102662 112102693 -33486595 + AT_rich Low_complexity Low_complexity 1 31 0 976 175 0 23 chr10 112103393 112103564 -33485724 - AluJb SINE Alu -12 300 134 2020 141 0 10 chr10 112103564 112103870 -33485418 - AluSx SINE Alu -9 303 1 1779 134 42 18 chr10 112104329 112104613 -33484675 + AluSx SINE Alu 1 291 -21 330 284 85 11 chr10 112104882 112105058 -33484230 + MIR SINE MIR 73 261 -1 1332 160 148 65 chr10 112105087 112105155 -33484133 - MLT1A1 LTR MaLR 0 365 304 2225 94 20 3 chr10 112105155 112105453 -33483835 + AluSq SINE Alu 1 303 -10 1332 160 148 65 chr10 112105453 112105721 -33483567 - MLT1A1 LTR MaLR -61 304 1 2270 101 3 0 chr10 112105828 112106124 -33483164 + AluSx SINE Alu 2 298 -14 856 168 6 95 chr10 112106134 112106313 -33482975 + FRAM SINE Alu 1 163 -13 475 123 19 123 chr10 112106541 112106647 -33482641 - L1M4 LINE L1 -410 5774 5680 2758 141 56 10 chr10 112107380 112107861 -33481427 - L1MB7 LINE L1 0 6184 5682 2290 90 10 3 chr10 112108194 112108505 -33480783 - AluSp SINE Alu 0 313 1 5620 151 30 30 chr10 112108506 112109058 -33480230 - L1MB7 LINE L1 -509 5675 5125 836 115 7 58 chr10 112109058 112109197 -33480091 - FLAM_C SINE Alu 0 133 2 5620 151 30 30 chr10 112109197 112109486 -33479802 - L1MB7 LINE L1 -1059 5125 4838 2264 110 3 0 chr10 112109486 112109787 -33479501 + AluSx SINE Alu 3 304 -8 5620 151 30 30 chr10 112109787 112110347 -33478941 - L1MB7 LINE L1 -1346 4838 4276 1544 183 10 33 chr10 112110686 112110987 -33478301 - AluJo SINE Alu -15 297 4 2396 92 0 19 chr10 112111112 112111429 -33477859 - AluSx SINE Alu -1 311 1 837 170 6 42 chr10 112111545 112111710 -33477578 + FRAM SINE Alu 1 158 -18 2478 82 0 0 chr10 112111727 112112033 -33477255 + AluSx SINE Alu 1 306 -6 1455 180 58 14 chr10 112112040 112112318 -33476970 + AluJo SINE Alu 1 290 -22 1483 189 3 39 chr10 112112456 112112768 -33476520 - AluJo SINE Alu -11 301 1 248 183 0 140 chr10 112113529 112113622 -33475666 + L1ME4a LINE L1 5953 6032 -89 593 184 88 9 chr10 112114121 112114235 -33475053 + FLAM_A SINE Alu 6 128 -14 925 148 0 15 chr10 112114640 112114775 -33474513 - FLAM_C SINE Alu 0 133 1 1983 144 0 16 chr10 112114871 112115004 -33474284 + AluJb SINE Alu 5 139 -173 2149 123 0 25 chr10 112115004 112115321 -33473967 + AluSx SINE Alu 1 309 -3 1983 144 0 16 chr10 112115321 112115493 -33473795 + AluJb SINE Alu 139 305 -7 512 299 0 0 chr10 112115702 112115829 -33473459 + HAL1 LINE L1 788 914 -1593 2129 89 39 0 chr10 112116545 112116857 -33472431 + AluSx SINE Alu 1 323 0 983 113 15 0 chr10 112116969 112117102 -33472186 - AluSq/x SINE Alu -177 135 1 2342 71 3 0 chr10 112117250 112117565 -33471723 - AluY SINE Alu 0 316 1 1932 125 0 11 chr10 112117569 112117849 -33471439 - AluSx SINE Alu -12 300 24 31 0 0 0 chr10 112118101 112118132 -33471156 + AT_rich Low_complexity Low_complexity 1 31 0 896 112 0 0 chr10 112118137 112118253 -33471035 - FLAM_C SINE Alu -15 118 3 1128 236 147 37 chr10 112118316 112118777 -33470511 + L2 LINE L2 2798 3312 -1 598 273 62 86 chr10 112118780 112119022 -33470266 + L1ME4a LINE L1 5492 5722 -399 3595 131 31 2 chr10 112119022 112119578 -33469710 - L1MB2 LINE L1 -14 6157 5586 598 273 62 86 chr10 112119578 112119741 -33469547 + L1ME4a LINE L1 5722 5887 -234 2300 101 0 0 chr10 112119802 112120098 -33469190 + AluSx SINE Alu 13 308 -4 1204 147 0 11 chr10 112120129 112120306 -33468982 + FAM SINE Alu 1 175 0 247 178 14 14 chr10 112120584 112120657 -33468631 + (TATATG)n Simple_repeat Simple_repeat 6 78 0 2175 112 20 0 chr10 112120929 112121225 -33468063 - AluSx SINE Alu -10 302 1 968 200 111 34 chr10 112121314 112121429 -33467859 - L1MC4 LINE L1 0 8042 7937 342 0 0 0 chr10 112121429 112121467 -33467821 + (TG)n Simple_repeat Simple_repeat 2 39 0 968 200 111 34 chr10 112121467 112121817 -33467471 - L1MC4 LINE L1 -105 7937 7469 349 271 62 8 chr10 112121870 112121999 -33467289 - L1MC4a LINE L1 -569 7239 7104 294 282 10 58 chr10 112122118 112122221 -33467067 - MIR SINE MIR -91 117 20 203 286 0 16 chr10 112122672 112122735 -33466553 + L2 LINE L2 3172 3233 -80 217 286 67 29 chr10 112122785 112122890 -33466398 + MIR3 SINE MIR 98 206 -2 2121 118 7 14 chr10 112124322 112124618 -33464670 + AluSx SINE Alu 2 295 -17 2404 74 6 10 chr10 112124620 112124932 -33464356 + AluY SINE Alu 1 311 0 366 301 92 99 chr10 112125023 112125679 -33463609 - L2 LINE L2 -73 3199 2547 196 283 76 43 chr10 112125782 112125874 -33463414 - MIR3 SINE MIR -111 97 3 2217 102 7 0 chr10 112126029 112126324 -33462964 - AluSp SINE Alu -15 298 2 1997 99 14 34 chr10 112126352 112126683 -33462605 + AluSq SINE Alu 1 325 0 1668 164 41 10 chr10 112127328 112127620 -33461668 + AluJo SINE Alu 1 301 -11 1628 126 0 9 chr10 112127826 112128056 -33461232 - AluSg/x SINE Alu 0 310 83 2120 131 0 0 chr10 112128057 112128347 -33460941 - AluSx SINE Alu -22 290 1 1688 178 3 19 chr10 112128480 112128656 -33460632 - AluJo SINE Alu -3 309 139 2391 71 3 3 chr10 112128656 112128953 -33460335 - AluSp SINE Alu -16 297 1 1688 178 3 19 chr10 112128953 112129090 -33460198 - AluJo SINE Alu -173 139 1 22 0 0 0 chr10 112129098 112129120 -33460168 + AT_rich Low_complexity Low_complexity 1 22 0 2420 88 0 0 chr10 112129133 112129438 -33459850 + AluY SINE Alu 1 305 -6 234 50 0 50 chr10 112129449 112129489 -33459799 + Alu SINE Alu 96 133 0 2168 110 0 17 chr10 112130111 112130412 -33458876 - AluSx SINE Alu -16 296 1 1677 202 0 3 chr10 112130414 112130711 -33458577 - AluSx SINE Alu -16 296 1 541 236 153 25 chr10 112130735 112130938 -33458350 - MIR SINE MIR -28 234 6 1828 151 33 10 chr10 112130964 112131269 -33458019 - AluJo SINE Alu 0 312 1 21 0 0 0 chr10 112131286 112131307 -33457981 + AT_rich Low_complexity Low_complexity 1 21 0 7596 42 7 0 chr10 112131685 112132725 -33456563 + L1P2 LINE L1 4443 5491 -663 989 99 23 0 chr10 112132725 112132856 -33456432 + AluSg SINE Alu 1 134 -176 2487 59 0 7 chr10 112132856 112133159 -33456129 + AluY SINE Alu 1 301 -10 5707 47 0 21 chr10 112133159 112133836 -33455452 + L1PA6 LINE L1 5481 6143 -11 22 0 0 0 chr10 112133836 112133858 -33455430 + AT_rich Low_complexity Low_complexity 1 22 0 2445 74 0 13 chr10 112133870 112134180 -33455108 + AluSx SINE Alu 1 306 -6 2454 74 3 0 chr10 112134788 112135086 -33454202 - AluSp SINE Alu -14 299 1 2415 97 7 0 chr10 112135310 112135620 -33453668 - AluSx SINE Alu 0 312 1 1843 139 54 0 chr10 112135787 112136082 -33453206 - AluJb SINE Alu -1 311 1 411 308 8 26 chr10 112136309 112136426 -33452862 + MIR SINE MIR 19 133 -129 813 206 6 6 chr10 112136426 112136591 -33452697 - FRAM SINE Alu -11 165 1 438 245 7 65 chr10 112136591 112136621 -33452667 + MIR SINE MIR 121 151 -111 2294 89 0 0 chr10 112136621 112136940 -33452348 + AluY SINE Alu 1 319 0 438 245 7 65 chr10 112136940 112137047 -33452241 + MIR SINE MIR 151 251 -11 25 31 0 0 chr10 112137370 112137402 -33451886 + AT_rich Low_complexity Low_complexity 1 32 0 1019 212 0 13 chr10 112137457 112137683 -33451605 - AluJo SINE Alu -1 311 89 500 138 0 0 chr10 112137683 112137748 -33451540 - AluSg/x SINE Alu -59 250 186 2031 104 58 0 chr10 112137748 112138026 -33451262 - AluSq SINE Alu -17 296 3 881 130 0 8 chr10 112138629 112138752 -33450536 + FLAM_C SINE Alu 1 122 -11 27 0 0 0 chr10 112138753 112138780 -33450508 + AT_rich Low_complexity Low_complexity 1 27 0 357 329 80 32 chr10 112138843 112138965 -33450323 + L1ME LINE L1 5370 5485 -685 1531 82 22 30 chr10 112138965 112139196 -33450092 + L1PA10 LINE L1 5940 6168 0 357 329 80 32 chr10 112139196 112139545 -33449743 + L1ME LINE L1 5485 5876 -294 324 0 0 0 chr10 112139546 112139582 -33449706 + (TG)n Simple_repeat Simple_repeat 2 37 0 2042 149 0 0 chr10 112141077 112141379 -33447909 - AluSx SINE Alu -10 302 1 412 238 184 12 chr10 112141517 112141639 -33447649 + MIR SINE MIR 63 223 -39 1453 186 15 100 chr10 112141639 112142038 -33447250 + MLT1A1 LTR MaLR 1 365 0 412 238 184 12 chr10 112142038 112142083 -33447205 + MIR SINE MIR 223 259 -3 1943 114 14 4 chr10 112143199 112143480 -33445808 + AluSx SINE Alu 1 284 -28 2071 102 17 7 chr10 112143855 112144150 -33445138 - AluSx SINE Alu -14 298 1 2140 114 20 0 chr10 112144698 112144995 -33444293 + AluSx SINE Alu 1 303 -9 553 260 245 0 chr10 112145095 112145295 -33443993 - MIR SINE MIR -6 256 8 190 171 0 49 chr10 112145321 112145362 -33443926 - MIR3 SINE MIR -3 205 167 1180 93 109 36 chr10 112145489 112145682 -33443606 - AluSx SINE Alu -105 207 1 281 309 118 9 chr10 112145911 112146021 -33443267 + L2 LINE L2 3147 3268 -4 2207 112 7 3 chr10 112146054 112146349 -33442939 - AluSx SINE Alu -14 298 3 2157 140 0 10 chr10 112147186 112147500 -33441788 + AluSx SINE Alu 1 311 -1 2454 85 0 0 chr10 112147571 112147877 -33441411 - AluY SINE Alu -5 306 1 1202 128 11 0 chr10 112148424 112148603 -33440685 + AluJo SINE Alu 120 300 -12 2069 130 7 3 chr10 112148605 112148897 -33440391 + AluSx SINE Alu 1 293 -19 230 133 0 22 chr10 112148899 112148944 -33440344 + (GGGA)n Simple_repeat Simple_repeat 3 46 0 2080 132 6 3 chr10 112149194 112149505 -33439783 + AluSx SINE Alu 1 312 0 1893 129 0 79 chr10 112149985 112150302 -33438986 + AluSx SINE Alu 1 292 -20 268 85 0 43 chr10 112150433 112150473 -33438815 + AluJo/FLAM SINE Alu 90 124 -178 2437 103 0 0 chr10 112150473 112150783 -33438505 - AluSg SINE Alu 0 310 1 24 0 0 0 chr10 112150789 112150813 -33438475 + AT_rich Low_complexity Low_complexity 1 24 0 271 169 85 0 chr10 112151088 112151147 -33438141 - L2 LINE L2 -1 3312 3249 597 149 0 0 chr10 112151360 112151447 -33437841 + FRAM SINE Alu 77 163 -13 745 186 0 0 chr10 112151900 112152018 -33437270 - FLAM_A SINE Alu -13 129 12 405 273 7 40 chr10 112152095 112152245 -33437043 + MIR3 SINE MIR 36 180 -28 248 235 0 29 chr10 112152285 112152353 -33436935 + Charlie8 DNA MER1_type 54 119 -2298 2130 88 33 0 chr10 112152363 112152661 -33436627 + AluSg SINE Alu 1 307 0 2289 80 0 17 chr10 112152751 112153050 -33436238 + AluSg SINE Alu 1 294 -16 363 310 94 66 chr10 112153313 112153603 -33435685 - L2 LINE L2 -437 2877 2597 1968 117 29 4 chr10 112153603 112153877 -33435411 + AluSx SINE Alu 1 281 -31 363 310 94 66 chr10 112153877 112154222 -33435066 - L2 LINE L2 -717 2597 2224 1478 267 137 4 chr10 112154271 112154781 -33434507 + MER69 DNA AcHobo 2 579 -1947 2271 107 0 3 chr10 112155338 112155637 -33433651 + AluSx SINE Alu 1 298 -14 189 0 0 0 chr10 112155832 112155853 -33433435 + (T)n Simple_repeat Simple_repeat 1 21 0 2009 170 3 0 chr10 112156006 112156317 -33432971 + AluJb SINE Alu 1 312 0 993 113 15 0 chr10 112156581 112156714 -33432574 - AluSq/x SINE Alu -177 135 1 2411 71 0 0 chr10 112156862 112157178 -33432110 - AluY SINE Alu 0 316 1 1944 125 0 11 chr10 112157182 112157462 -33431826 - AluSx SINE Alu -12 300 24 31 0 0 0 chr10 112157714 112157745 -33431543 + AT_rich Low_complexity Low_complexity 1 31 0 844 112 0 0 chr10 112157750 112157866 -33431422 - FLAM_C SINE Alu -15 118 3 1002 236 147 37 chr10 112157929 112158390 -33430898 + L2 LINE L2 2798 3312 -1 591 275 59 86 chr10 112158393 112158635 -33430653 + L1ME4a LINE L1 5492 5720 -401 3421 131 31 2 chr10 112158635 112159191 -33430097 - L1MB2 LINE L1 -14 6157 5586 591 275 59 86 chr10 112159191 112159355 -33429933 + L1ME4a LINE L1 5720 5887 -234 2315 101 0 0 chr10 112159415 112159711 -33429577 + AluSx SINE Alu 13 308 -4 1139 147 0 11 chr10 112159742 112159919 -33429369 + FAM SINE Alu 1 175 0 247 178 14 14 chr10 112160197 112160270 -33429018 + (TATATG)n Simple_repeat Simple_repeat 6 78 0 2195 112 20 0 chr10 112160542 112160838 -33428450 - AluSx SINE Alu -10 302 1 947 200 111 34 chr10 112160928 112161043 -33428245 - L1MC4 LINE L1 0 8042 7937 324 0 0 0 chr10 112161043 112161079 -33428209 + (TG)n Simple_repeat Simple_repeat 2 37 0 947 200 111 34 chr10 112161079 112161429 -33427859 - L1MC4 LINE L1 -105 7937 7469 343 271 62 8 chr10 112161481 112161610 -33427678 - L1MC4a LINE L1 -569 7239 7104 260 282 10 58 chr10 112161729 112161832 -33427456 - MIR SINE MIR -91 117 20 186 286 0 16 chr10 112162283 112162346 -33426942 + L2 LINE L2 3172 3233 -80 187 286 67 29 chr10 112162396 112162501 -33426787 + MIR3 SINE MIR 98 206 -2 2138 118 7 14 chr10 112163933 112164229 -33425059 + AluSx SINE Alu 2 295 -17 2426 74 6 10 chr10 112164231 112164543 -33424745 + AluY SINE Alu 1 311 0 270 297 59 106 chr10 112164886 112165290 -33423998 - L2 LINE L2 -383 2931 2547 2166 125 0 0 chr10 112165640 112165937 -33423351 - AluSx SINE Alu -15 297 1 2154 89 7 14 chr10 112167150 112167441 -33421847 - AluSx SINE Alu -23 289 1 30 45 0 0 chr10 112167764 112167808 -33421480 + AT_rich Low_complexity Low_complexity 1 44 0 2310 70 0 3 chr10 112167837 112168141 -33421147 + AluY SINE Alu 1 303 0 1050 117 19 7 chr10 112168690 112168844 -33420444 - AluY SINE Alu -46 265 110 303 168 48 144 chr10 112168947 112168997 -33420291 - L1M4 LINE L1 -616 5558 5505 2141 103 0 0 chr10 112168997 112169307 -33419981 - AluSg SINE Alu 0 320 11 303 168 48 144 chr10 112169307 112169380 -33419908 - L1M4 LINE L1 -669 5505 5446 1638 164 41 17 chr10 112169381 112169674 -33419614 - AluJo SINE Alu -12 300 1 2023 154 0 3 chr10 112169683 112169981 -33419307 - AluJb SINE Alu -9 303 7 2293 97 0 0 chr10 112169996 112170284 -33419004 - AluSg SINE Alu -22 288 1 2295 81 7 3 chr10 112170417 112170712 -33418576 - AluSp SINE Alu -14 299 4 326 179 90 0 chr10 112170862 112170929 -33418359 + MER58B DNA MER1_type 37 109 -232 863 209 7 0 chr10 112170939 112171092 -33418196 + FRAM SINE Alu 1 151 -25 1187 183 14 5 chr10 112171095 112171303 -33417985 + MER58B DNA MER1_type 129 338 -3 846 162 0 21 chr10 112171379 112171521 -33417767 - 7SLRNA srpRNA srpRNA -15 305 167 1709 165 0 38 chr10 112171681 112171972 -33417316 + AluJo SINE Alu 1 280 -32 222 37 0 0 chr10 112172019 112172046 -33417242 + (A)n Simple_repeat Simple_repeat 1 27 0 309 214 222 23 chr10 112172559 112172773 -33416515 - L1ME LINE L1 -617 5504 5264 2398 52 10 3 chr10 112173126 112173417 -33415871 + AluY SINE Alu 1 293 -18 455 159 183 24 chr10 112173717 112173843 -33415445 + MER104 DNA Tc2 1 146 -34 988 158 6 30 chr10 112174055 112174220 -33415068 - AluJ SINE Alu -19 293 133 880 123 0 43 chr10 112174290 112174428 -33414860 - AluJ SINE Alu -170 132 1 444 285 218 48 chr10 112175079 112175346 -33413942 + L3 LINE CR1 757 978 -599 1317 171 147 12 chr10 112175346 112175604 -33413684 - AluJo SINE Alu -5 297 5 444 285 218 48 chr10 112175604 112175975 -33413313 + L3 LINE CR1 978 1503 -74 1955 111 3 102 chr10 112177197 112177539 -33411749 - AluSx SINE Alu -4 308 1 1170 176 63 0 chr10 112177975 112178197 -33411091 - MER46A DNA MER2_type 0 236 1 1618 129 0 0 chr10 112178310 112178527 -33410761 + AluSx SINE Alu 1 217 -95 2139 115 0 19 chr10 112178685 112178998 -33410290 - AluY SINE Alu -2 309 3 1011 58 0 8 chr10 112179170 112179291 -33409997 - AluSg SINE Alu -190 120 1 21 89 0 0 chr10 112179672 112179728 -33409560 + AT_rich Low_complexity Low_complexity 1 56 0 2197 9 0 0 chr10 112180265 112180497 -33408791 + AluYb8 SINE Alu 75 306 -12 863 163 0 0 chr10 112180509 112180638 -33408650 + FLAM_C SINE Alu 1 129 -4 829 225 48 116 chr10 112181596 112181635 -33407653 - MLT2C1 LTR ERVL -2 395 355 180 0 0 0 chr10 112181635 112181655 -33407633 + (CA)n Simple_repeat Simple_repeat 2 21 0 829 225 48 116 chr10 112181655 112181993 -33407295 - MLT2C1 LTR ERVL -42 355 44 1010 159 13 86 chr10 112182388 112182620 -33406668 + L1MD1 LINE L1 6014 6228 -14 211 73 73 18 chr10 112182745 112182800 -33406488 + (TA)n Simple_repeat Simple_repeat 1 58 0 538 216 35 0 chr10 112182805 112182921 -33406367 - FLAM_A SINE Alu -10 123 4 2071 133 10 13 chr10 112183338 112183647 -33405641 - AluSx SINE Alu -4 308 1 2072 116 27 0 chr10 112184650 112184943 -33404345 - AluSx SINE Alu -11 301 1 2126 128 0 3 chr10 112185522 112185810 -33403478 + AluSx SINE Alu 9 295 -17 321 313 184 14 chr10 112186371 112186588 -33402700 - L3 LINE CR1 -313 1264 1011 1119 268 109 35 chr10 112187308 112187975 -33401313 + L2 LINE L2 1942 2658 -656 236 229 0 0 chr10 112188209 112188257 -33401031 + L2 LINE L2 3266 3313 0 1745 123 40 0 chr10 112189945 112190196 -33399092 + AluJo SINE Alu 38 298 -14 315 299 47 0 chr10 112191164 112191271 -33398017 - L3 LINE CR1 -169 1408 1297 747 109 18 0 chr10 112191292 112191402 -33397886 + AluSg/x SINE Alu 186 297 -13 22 35 0 0 chr10 112192292 112192321 -33396967 + AT_rich Low_complexity Low_complexity 1 29 0 335 0 0 0 chr10 112192611 112192647 -33396641 + U2 snRNA snRNA 1 36 -152 1982 100 59 0 chr10 112192715 112192986 -33396302 + AluSx SINE Alu 3 289 -23 2062 109 42 0 chr10 112193603 112193886 -33395402 + AluSx SINE Alu 1 295 -17 1401 159 0 9 chr10 112193928 112194148 -33395140 + AluJb SINE Alu 11 228 -84 1082 92 0 0 chr10 112194148 112194279 -33395009 - AluY SINE Alu -180 131 1 209 109 22 0 chr10 112194288 112194334 -33394954 + (TA)n Simple_repeat Simple_repeat 2 48 0 250 218 24 182 chr10 112195672 112195842 -33393446 + MLT1H LTR MaLR 238 380 -169 1155 172 5 20 chr10 112195966 112196170 -33393118 + AluJo SINE Alu 1 201 -111 586 232 113 131 chr10 112196170 112196301 -33392987 + HAL1 LINE L1 1683 1815 -692 1752 170 10 10 chr10 112196301 112196590 -33392698 - AluJb SINE Alu -21 291 3 586 232 113 131 chr10 112196590 112197090 -33392198 + HAL1 LINE L1 1815 2322 -185 1470 164 13 0 chr10 112197090 112197322 -33391966 + AluJo SINE Alu 1 235 -77 586 232 113 131 chr10 112197322 112197416 -33391872 + HAL1 LINE L1 2322 2395 -112 1952 107 0 86 chr10 112197416 112197753 -33391535 + AluSx SINE Alu 1 308 -4 586 232 113 131 chr10 112197753 112197865 -33391423 + HAL1 LINE L1 2395 2507 0 450 277 175 19 chr10 112197961 112198435 -33390853 - L2 LINE L2 0 3313 2683 2420 210 60 26 chr10 112198436 112199021 -33390267 + L1ME3A LINE L1 5556 6160 -10 886 253 64 69 chr10 112199024 112199431 -33389857 - L2 LINE L2 -604 2710 2306 2196 100 0 4 chr10 112199452 112199731 -33389557 + AluSg SINE Alu 3 280 -30 1809 148 4 0 chr10 112200007 112200270 -33389018 - AluSx SINE Alu -37 275 12 331 207 138 0 chr10 112200283 112200370 -33388918 - L1MEd LINE L1 -5991 128 30 1924 94 101 0 chr10 112200501 112200768 -33388520 - AluSp SINE Alu -19 294 1 861 209 31 15 chr10 112200772 112201031 -33388257 - L1M4 LINE L1 -2724 3422 3160 1574 176 75 0 chr10 112201191 112201469 -33387819 + AluJo SINE Alu 1 299 -13 1227 250 255 13 chr10 112201485 112202233 -33387055 - HAL1 LINE L1 -339 2168 1240 30 45 0 0 chr10 112202379 112202423 -33386865 + AT_rich Low_complexity Low_complexity 1 44 0 442 206 43 3 chr10 112203351 112203460 -33385828 + L1MB7 LINE L1 4157 4267 -1879 808 148 7 30 chr10 112203466 112203601 -33385687 + AluSq/x SINE Alu 2 133 -179 300 261 0 0 chr10 112203601 112203670 -33385618 + L1MB7 LINE L1 4258 4326 -1820 994 143 0 0 chr10 112203671 112203818 -33385470 - AluSg/x SINE Alu -10 302 156 2367 70 0 38 chr10 112203834 112204150 -33385138 - AluY SINE Alu -7 304 1 874 203 122 76 chr10 112204150 112204515 -33384773 + L1MB7 LINE L1 4316 4697 -1449 * 1140 163 21 0 chr10 112204506 112204719 -33384569 + L1MB3 LINE L1 5334 5557 -614 2034 139 0 0 chr10 112204722 112205010 -33384278 + AluSq SINE Alu 1 288 -25 402 21 0 0 chr10 112205159 112205206 -33384082 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 814 154 37 0 chr10 112205206 112205342 -33383946 + L1MB3 LINE L1 5554 5694 -489 1805 168 30 0 chr10 112205362 112205665 -33383623 - AluSx SINE Alu 0 312 1 949 127 8 0 chr10 112205665 112205799 -33383489 - AluSq/x SINE Alu -178 135 1 2669 159 37 6 chr10 112205799 112206282 -33383006 + L1MB3 LINE L1 5686 6183 0 2789 156 51 74 chr10 112206292 112206642 -33382646 + L1MB7 LINE L1 4735 5092 -1092 1838 138 34 10 chr10 112206642 112206940 -33382348 + AluSx SINE Alu 1 305 -7 2789 156 51 74 chr10 112206940 112207400 -33381888 + L1MB7 LINE L1 5092 5513 -671 2302 100 3 0 chr10 112207400 112207699 -33381589 - AluSp SINE Alu -13 300 1 2789 156 51 74 chr10 112207699 112208037 -33381251 + L1MB7 LINE L1 5513 5857 -327 2083 131 3 3 chr10 112208037 112208334 -33380954 - AluSx SINE Alu -15 297 1 251 243 54 40 chr10 112208358 112208432 -33380856 - L1ME3A LINE L1 -5 6165 6091 289 180 33 33 chr10 112208457 112208518 -33380770 + Alu SINE Alu 3 56 -246 2215 109 0 3 chr10 112208638 112208932 -33380356 - AluSx SINE Alu -5 307 15 840 268 86 22 chr10 112208969 112209489 -33379799 - L2 LINE L2 0 3313 761 696 307 113 22 chr10 112209490 112209907 -33379381 + L1MEc LINE L1 22 476 -5920 481 203 195 8 chr10 112209907 112210030 -33379258 - L2 LINE L2 -3140 174 29 340 263 38 0 chr10 112210760 112210840 -33378448 - MIR SINE MIR -31 231 149 981 176 93 16 chr10 112210934 112211127 -33378161 - MER63A DNA MER1_type 0 210 3 1378 159 35 9 chr10 112211165 112211397 -33377891 - MSTB LTR MaLR 0 426 189 1831 168 0 10 chr10 112211397 112211695 -33377593 - AluJb SINE Alu -17 295 1 522 99 25 0 chr10 112212119 112212200 -33377088 + Alu SINE Alu 225 307 -2 205 176 0 0 chr10 112212705 112212739 -33376549 + (TGAA)n Simple_repeat Simple_repeat 1 34 0 619 261 104 33 chr10 112212990 112213231 -33376057 + MIR SINE MIR 4 261 -1 314 299 51 80 chr10 112214034 112214171 -33375117 - L2 LINE L2 -4 3268 3136 2070 146 0 7 chr10 112214389 112214697 -33374591 - AluJb SINE Alu -6 306 1 1901 149 124 11 chr10 112214794 112215150 -33374138 - MSTD LTR MaLR 0 396 1 611 265 12 71 chr10 112215475 112215626 -33373662 + L1MC4 LINE L1 7194 7326 -716 2237 105 3 0 chr10 112215626 112215932 -33373356 + AluSg SINE Alu 1 307 -3 611 265 12 71 chr10 112215932 112216033 -33373255 + L1MC4 LINE L1 7326 7431 -611 393 279 27 27 chr10 112216081 112216228 -33373060 + L1MC5 LINE L1 7317 7463 -498 2339 103 0 0 chr10 112216237 112216548 -33372740 + AluY SINE Alu 1 311 0 318 250 115 26 chr10 112216621 112216777 -33372511 + L1MC5 LINE L1 7741 7910 -51 407 248 152 42 chr10 112216798 112217108 -33372180 + L1MC4 LINE L1 7560 7903 -139 23 20 0 61 chr10 112217206 112217255 -33372033 + AT_rich Low_complexity Low_complexity 1 46 0 908 173 6 0 chr10 112217295 112217451 -33371837 + MSTB LTR MaLR 3 159 -267 983 224 50 104 chr10 112217620 112217688 -33371600 - L1M4 LINE L1 -1756 4390 4320 2047 146 0 0 chr10 112217688 112217983 -33371305 + AluSq SINE Alu 1 295 -18 983 224 50 104 chr10 112217983 112218057 -33371231 - L1M4 LINE L1 -1826 4320 4244 1600 152 0 0 chr10 112218057 112218287 -33371001 - AluJb SINE Alu -19 293 64 983 224 50 104 chr10 112218287 112218518 -33370770 - L1M4 LINE L1 -1902 4244 4002 2130 133 3 0 chr10 112218518 112218827 -33370461 - AluSx SINE Alu -2 310 1 983 224 50 104 chr10 112218827 112218971 -33370317 - L1M4 LINE L1 -2144 4002 3898 1531 181 3 21 chr10 112218971 112219253 -33370035 - AluJo SINE Alu -35 277 1 983 224 50 104 chr10 112219253 112219268 -33370020 - L1M4 LINE L1 -2248 3898 3884 4586 67 12 10 chr10 112219307 112220330 -33368958 - MER11A LTR ERVK 0 1266 1 644 306 47 0 chr10 112220569 112220739 -33368549 - MER45A DNA AcHobo 0 178 1 2111 130 3 0 chr10 112220819 112221120 -33368168 + AluSx SINE Alu 1 302 -10 2188 100 7 0 chr10 112221316 112221605 -33367683 + AluSp SINE Alu 1 291 -22 1560 183 66 3 chr10 112221731 112222020 -33367268 + AluJo SINE Alu 1 307 -5 362 292 35 0 chr10 112222129 112222242 -33367046 + MER20B DNA MER1_type 383 499 -284 1789 179 27 3 chr10 112222551 112222852 -33366436 - AluJb SINE Alu -4 308 1 242 200 145 76 chr10 112222882 112222938 -33366350 + L1ME4a LINE L1 5967 6018 -103 2119 118 7 0 chr10 112222938 112223235 -33366053 - AluSx SINE Alu -13 299 1 242 200 145 76 chr10 112223235 112223323 -33365965 + L1ME4a LINE L1 6018 6121 0 2300 110 0 0 chr10 112223495 112223786 -33365502 + AluSg SINE Alu 1 291 -19 366 23 0 0 chr10 112223968 112224011 -33365277 + (TG)n Simple_repeat Simple_repeat 2 44 0 2298 91 7 14 chr10 112224015 112224312 -33364976 - AluSq SINE Alu -18 295 1 741 295 5 0 chr10 112224440 112224630 -33364658 - L1MC/D LINE L1 -2096 5712 5522 2107 98 0 7 chr10 112224685 112224962 -33364326 + AluSx SINE Alu 1 275 -37 189 0 0 0 chr10 112224962 112224983 -33364305 + (T)n Simple_repeat Simple_repeat 1 21 0 214 333 274 8 chr10 112225372 112225489 -33363799 + MIR SINE MIR 6 153 -109 195 283 87 0 chr10 112225559 112225651 -33363637 + MIR SINE MIR 88 187 -75 274 388 68 20 chr10 112226491 112226638 -33362650 - L2 LINE L2 -8 3264 3111 * 582 253 52 46 chr10 112226635 112226829 -33362459 - MIR SINE MIR -5 257 63 983 180 12 12 chr10 112227067 112227228 -33362060 + FRAM SINE Alu 1 161 -5 335 287 33 100 chr10 112227839 112227893 -33361395 - MER91A DNA MER1_type -1 195 139 2124 135 3 0 chr10 112227893 112228204 -33361084 + AluSx SINE Alu 1 312 0 335 287 33 100 chr10 112228204 112228299 -33360989 - MER91A DNA MER1_type -57 139 56 309 138 61 182 chr10 112228380 112228528 -33360760 - L1MC3 LINE L1 -986 6799 6730 377 289 35 18 chr10 112228718 112228832 -33360456 - L2 LINE L2 -19 3294 3179 1287 263 206 28 chr10 112229616 112230005 -33359283 - L2 LINE L2 -21 3292 2974 2166 124 7 0 chr10 112230005 112230303 -33358985 + AluSx SINE Alu 1 300 -12 1287 263 206 28 chr10 112230303 112230993 -33358295 - L2 LINE L2 -339 2974 2009 1706 116 123 0 chr10 112231000 112231277 -33358011 - AluSx SINE Alu -1 311 1 358 167 15 0 chr10 112231307 112231373 -33357915 + AluJ/FLAM SINE Alu 1 67 -235 310 266 63 63 chr10 112232536 112232679 -33356609 + L1MEd LINE L1 122 264 -5855 274 253 63 0 chr10 112232768 112232847 -33356441 + LTR67 LTR ERVL 120 203 -354 531 239 0 39 chr10 112233166 112233296 -33355992 + L2 LINE L2 3188 3312 -1 2205 104 0 0 chr10 112233444 112233724 -33355564 + AluSx SINE Alu 1 280 -32 920 237 176 66 chr10 112233747 112234185 -33355103 + L1MEd LINE L1 319 804 -5315 507 272 40 35 chr10 112234781 112234954 -33354334 - MIR SINE MIR -82 180 7 2208 90 10 7 chr10 112235107 112235407 -33353881 + AluSq SINE Alu 1 301 -12 2201 102 7 3 chr10 112236393 112236688 -33352600 + AluSx SINE Alu 1 296 -16 1992 105 18 4 chr10 112237417 112237537 -33351751 + AluSx SINE Alu 3 120 -192 185 0 40 0 chr10 112237537 112237562 -33351726 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1992 105 18 4 chr10 112237562 112237718 -33351570 + AluSx SINE Alu 120 283 -29 933 145 0 0 chr10 112238105 112238236 -33351052 - FLAM_C SINE Alu -2 131 1 326 265 103 70 chr10 112238385 112238570 -33350718 - MIR SINE MIR -36 226 36 939 72 112 0 chr10 112238631 112238756 -33350532 - MER85 DNA T2_type 0 139 1 2139 177 119 4 chr10 112238756 112239253 -33350035 - Charlie1a DNA MER1_type -9 1446 893 255 231 0 0 chr10 112239267 112239319 -33349969 + L1MC3 LINE L1 7060 7111 -674 351 227 23 34 chr10 112239334 112239422 -33349866 + MLT1F1 LTR MaLR 35 121 -446 2357 181 40 6 chr10 112239422 112239958 -33349330 + L1MD3 LINE L1 7184 7986 -9 3833 187 72 30 chr10 112239960 112240204 -33349084 - Charlie1a DNA MER1_type -1867 894 662 2185 103 36 10 chr10 112240204 112240505 -33348783 - AluSx SINE Alu -2 310 2 2297 110 0 3 chr10 112240506 112240807 -33348481 - AluSx SINE Alu -12 300 1 3833 187 72 30 chr10 112240807 112241157 -33348131 - Charlie1a DNA MER1_type -2099 662 249 1571 157 54 18 chr10 112241157 112241437 -33347851 - AluJo SINE Alu -22 290 1 3833 187 72 30 chr10 112241437 112241696 -33347592 - Charlie1a DNA MER1_type -2512 249 2 2162 119 3 20 chr10 112242541 112242844 -33346444 + AluSx SINE Alu 1 298 -14 2044 88 0 0 chr10 112243479 112243728 -33345560 + AluSc SINE Alu 38 286 -23 2112 116 10 0 chr10 112243752 112244046 -33345242 + AluSx SINE Alu 3 299 -13 2381 77 0 19 chr10 112244286 112244596 -33344692 + AluSc SINE Alu 1 304 -5 2244 107 13 0 chr10 112244925 112245224 -33344064 - AluSx SINE Alu -9 303 1 721 219 87 13 chr10 112245549 112245647 -33343641 + MER58 DNA MER1_type 1 90 -2330 1960 164 3 6 chr10 112245647 112245958 -33343330 + AluJo SINE Alu 1 310 -2 721 219 87 13 chr10 112245958 112246141 -33343147 + MER58 DNA MER1_type 90 2420 0 247 0 79 0 chr10 112247005 112247043 -33342245 + T-rich Low_complexity Low_complexity 2 42 0 415 305 57 38 chr10 112247818 112248080 -33341208 + L1ME4a LINE L1 5835 6101 -20 2005 118 40 20 chr10 112248233 112248537 -33340751 + AluSg SINE Alu 1 310 0 1685 156 44 37 chr10 112249600 112249895 -33339393 + AluJo SINE Alu 1 297 -15 239 25 25 25 chr10 112251365 112251405 -33337883 + (TTTG)n Simple_repeat Simple_repeat 2 72 0 2072 138 0 0 chr10 112251405 112251688 -33337600 - AluSx SINE Alu -1 322 1 1649 151 39 14 chr10 112252274 112252558 -33336730 + AluJo SINE Alu 1 291 -21 1809 138 57 13 chr10 112252695 112252993 -33336295 + AluSx SINE Alu 2 312 0 2158 99 21 0 chr10 112253529 112253812 -33335476 + AluSx SINE Alu 1 289 -23 24 0 0 0 chr10 112253812 112253836 -33335452 + AT_rich Low_complexity Low_complexity 1 24 0 293 283 127 55 chr10 112253986 112254347 -33334941 + L1M4 LINE L1 3564 3950 -2196 389 295 50 0 chr10 112255275 112255414 -33333874 - MER5A DNA MER1_type 0 189 44 656 202 0 0 chr10 112256800 112256940 -33332348 - FLAM_A SINE Alu 0 140 1 1813 118 20 69 chr10 112256978 112257283 -33332005 + AluJo SINE Alu 3 292 -20 301 290 32 32 chr10 112257662 112257786 -33331502 + MER5B DNA MER1_type 1 124 -54 1716 140 114 0 chr10 112259510 112259781 -33329507 - AluJo SINE Alu -10 302 1 182 288 51 0 chr10 112260080 112260139 -33329149 - L2 LINE L2 -25 3288 3227 638 175 7 80 chr10 112260636 112260773 -33328515 + FLAM_C SINE Alu 2 128 -15 25 51 0 0 chr10 112260775 112260814 -33328474 + AT_rich Low_complexity Low_complexity 1 39 0 1877 241 138 13 chr10 112261242 112261931 -33327357 - L1ME3A LINE L1 0 6170 5396 199 375 0 0 chr10 112262671 112262751 -33326537 + MIR SINE MIR 33 112 -96 1702 133 0 0 chr10 112263113 112263353 -33325935 + AluSx SINE Alu 54 293 -19 540 241 147 29 chr10 112265173 112265418 -33323870 + MER46C DNA MER2_type 64 337 -1 21 0 0 0 chr10 112265418 112265439 -33323849 + AT_rich Low_complexity Low_complexity 1 21 0 2866 22 0 3 chr10 112265992 112266310 -33322978 + AluYb8 SINE Alu 1 317 -1 270 281 70 123 chr10 112266330 112266419 -33322869 - MIR SINE MIR -12 250 158 2109 109 4 4 chr10 112266419 112266694 -33322594 + AluSx SINE Alu 1 275 -37 180 0 0 0 chr10 112266698 112266718 -33322570 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 270 281 70 123 chr10 112266718 112266794 -33322494 - MIR SINE MIR -107 155 89 2099 135 0 3 chr10 112266963 112267259 -33322029 + AluJb SINE Alu 1 295 -17 204 291 97 18 chr10 112267365 112267530 -33321758 + L3 LINE CR1 1206 1383 -194 22 0 0 0 chr10 112274941 112274963 -33314325 + AT_rich Low_complexity Low_complexity 1 22 0 288 0 0 0 chr10 112279675 112279707 -33309581 + (T)n Simple_repeat Simple_repeat 1 32 0 22 0 0 0 chr10 112280460 112280482 -33308806 + AT_rich Low_complexity Low_complexity 1 22 0 2198 85 14 10 chr10 112280923 112281217 -33308071 - AluSp SINE Alu -18 295 1 218 188 0 21 chr10 112282197 112282245 -33307043 + CT-rich Low_complexity Low_complexity 2 48 0 893 179 19 0 chr10 112282756 112282912 -33306376 - AluJb SINE Alu -17 295 137 183 0 0 0 chr10 112283349 112283373 -33305915 - L2 LINE L2 -6 3307 3284 1973 137 7 17 chr10 112283571 112283871 -33305417 - AluSx SINE Alu -15 297 1 1114 99 0 0 chr10 112283881 112284022 -33305266 - AluSp/q SINE Alu -17 296 156 400 175 318 0 chr10 112284686 112284812 -33304476 + MER105 DNA DNA 1 166 -38 247 208 181 0 chr10 112284815 112284887 -33304401 + MER105 DNA DNA 119 203 -1 472 254 65 24 chr10 112284902 112285071 -33304217 - MIR SINE MIR -58 204 29 193 321 0 0 chr10 112285457 112285510 -33303778 + L3 LINE CR1 1518 1570 -7 2359 88 0 0 chr10 112287133 112287428 -33301860 + AluSc SINE Alu 1 295 -14 2416 91 0 7 chr10 112289095 112289403 -33299885 + AluSg SINE Alu 1 306 -4 926 183 59 10 chr10 112290670 112290872 -33298416 - L1MD3 LINE L1 -13 7982 7771 661 264 43 14 chr10 112290983 112291191 -33298097 + MIR SINE MIR 49 262 0 1824 167 7 7 chr10 112291613 112291906 -33297382 - AluJb SINE Alu -19 293 1 21 82 0 0 chr10 112292066 112292115 -33297173 + AT_rich Low_complexity Low_complexity 1 49 0 25 65 0 0 chr10 112293865 112293911 -33295377 + AT_rich Low_complexity Low_complexity 1 46 0 660 104 22 82 chr10 112294031 112294165 -33295123 - FLAM_A SINE Alu 0 142 17 406 261 159 74 chr10 112294651 112295041 -33294247 + MLT1H LTR MaLR 17 439 -110 631 81 0 0 chr10 112295050 112295136 -33294152 - Alu SINE Alu -3 307 222 1713 175 31 3 chr10 112296387 112296678 -33292610 - AluJb SINE Alu -13 299 1 2163 107 14 7 chr10 112299925 112300216 -33289072 + AluSx SINE Alu 1 293 -19 2219 85 7 0 chr10 112300405 112300714 -33288574 + AluSx SINE Alu 1 311 0 2115 102 36 7 chr10 112301378 112301681 -33287607 - AluSx SINE Alu 0 312 1 227 167 0 0 chr10 112302685 112302721 -33286567 + AluSx SINE Alu 1 36 -263 2090 122 0 0 chr10 112302721 112303007 -33286281 + AluSx SINE Alu 16 301 -11 28 29 0 0 chr10 112303483 112303518 -33285770 + AT_rich Low_complexity Low_complexity 1 35 0 216 0 24 71 chr10 112304344 112304386 -33284902 + (CAAAAA)n Simple_repeat Simple_repeat 2 41 0 21 36 0 0 chr10 112305832 112305860 -33283428 + AT_rich Low_complexity Low_complexity 1 28 0 197 330 132 19 chr10 112306090 112306196 -33283092 - L2 LINE L2 -8 3264 3147 233 319 106 0 chr10 112306502 112306643 -33282645 - Charlie8 DNA MER1_type -2162 255 100 1814 95 62 46 chr10 112306665 112306970 -33282318 + AluSg SINE Alu 1 310 0 235 291 164 0 chr10 112307414 112307524 -33281764 - L3b LINE CR1 -150 1433 1306 2136 125 0 3 chr10 112307650 112307954 -33281334 + AluSx SINE Alu 1 303 -9 23 0 0 0 chr10 112308704 112308727 -33280561 + AT_rich Low_complexity Low_complexity 1 23 0 285 235 50 17 chr10 112308739 112308858 -33280430 - L1MC5 LINE L1 -56 7905 7783 1562 188 32 19 chr10 112309098 112309406 -33279882 - AluJo SINE Alu 0 312 1 795 259 88 86 chr10 112309832 112309895 -33279393 - MARNA DNA Mariner -48 538 477 1584 224 0 7 chr10 112309895 112310199 -33279089 + AluJo SINE Alu 1 302 -10 795 259 88 86 chr10 112310199 112310637 -33278651 - MARNA DNA Mariner -109 477 36 1761 178 16 13 chr10 112310884 112311188 -33278100 - AluJb SINE Alu -5 307 3 26 0 0 0 chr10 112311291 112311317 -33277971 + AT_rich Low_complexity Low_complexity 1 26 0 2253 110 3 0 chr10 112311620 112311911 -33277377 + AluSp SINE Alu 1 292 -21 2019 162 7 0 chr10 112312351 112312660 -33276628 + AluJb SINE Alu 1 311 -1 3936 172 44 34 chr10 112312663 112313837 -33275451 + L1MB4 LINE L1 4987 6173 -7 1915 136 3 3 chr10 112314424 112314710 -33274578 + AluSx SINE Alu 1 286 -26 227 152 0 22 chr10 112315127 112315173 -33274115 + MER34 LTR ERV1 67 111 -431 1123 224 44 53 chr10 112315207 112315618 -33273670 + MER39 LTR ERV1 301 707 0 1309 185 49 62 chr10 112315655 112315827 -33273461 - AluJo SINE Alu -8 304 136 593 118 0 0 chr10 112315827 112315912 -33273376 - L1PA10 LINE L1 -10 6158 6074 1309 185 49 62 chr10 112315912 112316047 -33273241 - AluJo SINE Alu -176 136 1 204 315 171 0 chr10 112316052 112316163 -33273125 + MIR SINE MIR 132 261 -1 23 0 0 0 chr10 112316742 112316765 -33272523 + AT_rich Low_complexity Low_complexity 1 23 0 329 186 69 26 chr10 112317183 112317290 -33271998 - MIR SINE MIR -59 149 45 210 109 62 0 chr10 112317400 112317464 -33271824 + (TTTAA)n Simple_repeat Simple_repeat 1 68 0 2209 112 0 13 chr10 112318874 112319179 -33270109 + AluSg SINE Alu 1 301 -9 6818 66 16 49 chr10 112319309 112321553 -33267735 + SVA Other Other 4 1386 0 26 30 0 0 chr10 112321553 112321586 -33267702 + AT_rich Low_complexity Low_complexity 1 33 0 1063 182 4 44 chr10 112322317 112322542 -33266746 + MLT1A1 LTR MaLR 3 218 -147 1391 179 42 79 chr10 112322547 112322617 -33266671 + L1MD3 LINE L1 7599 7670 -325 1876 181 0 3 chr10 112322617 112322916 -33266372 + AluJb SINE Alu 2 299 -13 1391 179 42 79 chr10 112322916 112322936 -33266352 + L1MD3 LINE L1 7670 7689 -306 2181 125 7 3 chr10 112322936 112323233 -33266055 + AluSq SINE Alu 1 298 -15 1391 179 42 79 chr10 112323233 112323521 -33265767 + L1MD3 LINE L1 7689 7964 -31 2339 70 0 23 chr10 112323525 112323827 -33265461 - AluY SINE Alu -16 295 1 424 173 23 90 chr10 112323869 112323968 -33265320 + L1ME2 LINE L1 5814 5918 -246 2148 129 53 34 chr10 112323968 112324251 -33265037 + THE1B LTR MaLR 1 294 -70 2061 125 24 0 chr10 112324251 112324538 -33264750 - AluSq SINE Alu -19 294 1 2148 129 53 34 chr10 112324538 112324611 -33264677 + THE1B LTR MaLR 294 364 0 12021 89 4 1 chr10 112324611 112326186 -33263102 + THE1B-int LTR MaLR 1 1580 0 2040 121 76 51 chr10 112326186 112326470 -33262818 + THE1B LTR MaLR 1 276 -88 2174 100 0 42 chr10 112326470 112326779 -33262509 + AluSx SINE Alu 1 296 -16 2181 108 0 7 chr10 112326780 112327075 -33262213 + AluSx SINE Alu 1 293 -19 2040 121 76 51 chr10 112327075 112327143 -33262145 + THE1B LTR MaLR 275 364 0 424 173 23 90 chr10 112327143 112327174 -33262114 + L1ME2 LINE L1 5915 5937 -227 537 205 47 158 chr10 112327231 112327465 -33261823 + MIR SINE MIR 45 252 -10 2091 122 10 3 chr10 112327604 112327900 -33261388 - AluSx SINE Alu -14 298 1 206 238 0 0 chr10 112327989 112328031 -33261257 + L2 LINE L2 3264 3305 -8 180 77 0 0 chr10 112328903 112328929 -33260359 + (TTGG)n Simple_repeat Simple_repeat 2 27 0 23 0 0 0 chr10 112328937 112328960 -33260328 + AT_rich Low_complexity Low_complexity 1 23 0 2579 95 11 3 chr10 112329250 112329609 -33259679 - L1PA8 LINE L1 -6 6166 5805 2324 89 3 0 chr10 112329705 112329998 -33259290 + AluSq SINE Alu 3 296 -17 4279 164 54 33 chr10 112330580 112330898 -33258390 - L1MA9 LINE L1 -35 6277 5967 1828 154 10 7 chr10 112330898 112331196 -33258092 - AluJo SINE Alu -13 299 1 4279 164 54 33 chr10 112331196 112332098 -33257190 - L1MA9 LINE L1 -345 5967 5042 1855 165 0 13 chr10 112332152 112332461 -33256827 + AluJo SINE Alu 1 305 -7 27 0 0 0 chr10 112332651 112332678 -33256610 + AT_rich Low_complexity Low_complexity 1 27 0 191 200 73 18 chr10 112332750 112332805 -33256483 - L2 LINE L2 -66 3247 3190 1830 175 30 0 chr10 112333372 112333675 -33255613 + AluJb SINE Alu 1 312 0 2299 102 6 19 chr10 112333680 112333994 -33255294 + AluSg SINE Alu 1 310 0 232 227 0 134 chr10 112334172 112334269 -33255019 - MER5A DNA MER1_type 0 189 106 373 209 36 36 chr10 112334275 112334385 -33254903 + Charlie7 DNA MER1_type 1 110 -2502 1080 162 0 32 chr10 112334410 112334595 -33254693 - AluJb SINE Alu -14 298 120 1966 161 3 0 chr10 112334650 112334949 -33254339 + AluJo SINE Alu 1 300 -12 195 332 129 27 chr10 112337575 112337831 -33251457 + L2 LINE L2 2376 2657 -657 1174 196 133 0 chr10 112337850 112338135 -33251153 + MER5C DNA MER1_type 2 324 0 182 256 26 0 chr10 112338681 112338720 -33250568 + L2 LINE L2 3205 3244 -28 1197 117 29 10 chr10 112338777 112338982 -33250306 + L1MB7 LINE L1 5976 6184 0 2457 63 3 10 chr10 112339297 112339598 -33249690 + AluY SINE Alu 1 299 -12 226 189 38 0 chr10 112339799 112339852 -33249436 - HsTC2 DNA Tc2 -14 1884 1830 252 282 14 0 chr10 112340109 112340180 -33249108 + L1MEd LINE L1 574 645 -5474 244 268 0 0 chr10 112340190 112340261 -33249027 - HsTC2 DNA Tc2 -1824 74 4 22 35 0 0 chr10 112340767 112340796 -33248492 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr10 112340832 112340853 -33248435 + AT_rich Low_complexity Low_complexity 1 21 0 2775 187 137 29 chr10 112341038 112342158 -33247130 - L1ME1 LINE L1 -5 6161 4879 2226 97 7 7 chr10 112342158 112342456 -33246832 + AluSp SINE Alu 1 298 -15 2775 187 137 29 chr10 112342456 112342601 -33246687 - L1ME1 LINE L1 -1287 4879 4751 203 185 25 49 chr10 112345355 112345436 -33243852 + A-rich Low_complexity Low_complexity 3 81 0 450 291 120 0 chr10 112345459 112345617 -33243671 + MIR SINE MIR 2 178 -84 239 191 64 0 chr10 112346059 112346106 -33243182 - L2 LINE L2 0 3272 3223 358 317 191 6 chr10 112346288 112346471 -33242817 - MIR SINE MIR -39 223 7 657 110 0 0 chr10 112346583 112346674 -33242614 + AluJb SINE Alu 201 291 -21 1529 203 21 21 chr10 112346858 112347149 -33242139 + AluJo SINE Alu 1 291 -21 274 318 62 16 chr10 112347157 112347286 -33242002 - L2 LINE L2 -652 2662 2528 2206 98 3 3 chr10 112347449 112347744 -33241544 + AluSp SINE Alu 1 295 -18 1596 97 0 0 chr10 112347752 112347958 -33241330 + AluY SINE Alu 1 206 -105 200 225 12 38 chr10 112348025 112348105 -33241183 + (TTATA)n Simple_repeat Simple_repeat 2 79 0 521 267 96 53 chr10 112348157 112348532 -33240756 + L1MC4a LINE L1 6217 6607 -1201 1780 226 57 67 chr10 112348575 112348769 -33240519 + L1M4 LINE L1 2644 2838 -3308 2254 109 0 0 chr10 112348769 112349071 -33240217 + AluSc SINE Alu 1 302 -7 1780 226 57 67 chr10 112349071 112349511 -33239777 + L1M4 LINE L1 2838 3269 -2877 2195 106 3 10 chr10 112349511 112349822 -33239466 + AluSx SINE Alu 1 309 -3 1780 226 57 67 chr10 112349822 112350062 -33239226 + L1M4 LINE L1 3269 3510 -2636 907 199 6 0 chr10 112350064 112350220 -33239068 + FAM SINE Alu 1 157 -18 363 44 0 0 chr10 112350224 112350269 -33239019 + (CA)n Simple_repeat Simple_repeat 2 46 0 700 188 0 7 chr10 112350269 112350418 -33238870 + L1M4 LINE L1 4263 4410 -1736 1154 190 8 38 chr10 112350418 112350655 -33238633 + AluJo SINE Alu 81 310 -2 3640 198 40 15 chr10 112350655 112351708 -33237580 + L1M4 LINE L1 4411 5485 -699 2276 86 13 7 chr10 112351708 112352010 -33237278 + AluSc SINE Alu 1 304 -5 337 132 38 0 chr10 112352119 112352172 -33237116 - MER8 DNA MER2_type 0 239 185 1444 191 16 8 chr10 112352172 112352429 -33236859 - AluJo SINE Alu -9 303 45 230 322 17 0 chr10 112352444 112352503 -33236785 + Tigger2 DNA MER2_type 2649 2708 -10 1109 89 31 29 chr10 112353099 112353353 -33235935 - AluJb SINE Alu -92 220 5 288 0 0 0 chr10 112353494 112353526 -33235762 + (CG)n Simple_repeat Simple_repeat 2 33 0 231 242 15 0 chr10 112353683 112353749 -33235539 - L1MC4 LINE L1 -1336 6706 6640 2193 96 7 0 chr10 112354330 112354612 -33234676 - AluSx SINE Alu -18 294 11 2244 107 0 16 chr10 112354946 112355254 -33234034 - AluSx SINE Alu -9 303 1 638 174 0 65 chr10 112355627 112355765 -33233523 - FLAM_C SINE Alu -3 130 2 3201 214 35 30 chr10 112355773 112356242 -33233046 - L1ME1 LINE L1 -4 6162 5697 1637 153 64 18 chr10 112356242 112356523 -33232765 - AluJb SINE Alu -14 298 5 3201 214 35 30 chr10 112356523 112357016 -33232272 - L1ME1 LINE L1 -469 5697 5197 1054 146 0 6 chr10 112357247 112357412 -33231876 - FRAM SINE Alu -2 174 11 445 98 33 0 chr10 112357417 112357478 -33231810 + AluY SINE Alu 115 177 -134 328 267 0 0 chr10 112357528 112357603 -33231685 + L2 LINE L2 2992 3066 -247 895 91 0 0 chr10 112357609 112357730 -33231558 - MER41A LTR ERV1 0 554 434 2422 107 0 0 chr10 112357730 112358040 -33231248 + AluSg SINE Alu 1 310 0 216 0 0 0 chr10 112358411 112358435 -33230853 + (TA)n Simple_repeat Simple_repeat 2 25 0 307 311 53 0 chr10 112358498 112358630 -33230658 - L1MEc LINE L1 -5011 1385 1247 750 97 0 35 chr10 112358648 112358761 -33230527 - AluY SINE Alu -9 302 194 276 149 0 0 chr10 112358763 112358810 -33230478 + (CATATA)n Simple_repeat Simple_repeat 2 48 0 928 95 116 0 chr10 112358816 112358963 -33230325 + L1PB4 LINE L1 5993 6156 0 2252 105 23 0 chr10 112359079 112359385 -33229903 - AluSq SINE Alu 0 313 1 346 196 225 36 chr10 112359578 112359716 -33229572 + L2 LINE L2 3102 3265 -48 1860 152 3 13 chr10 112360503 112360818 -33228470 + AluJb SINE Alu 1 312 0 638 239 51 35 chr10 112361077 112361332 -33227956 - MIR SINE MIR 0 262 4 184 274 0 0 chr10 112361395 112361457 -33227831 + MIR SINE MIR 200 261 -1 2202 104 3 0 chr10 112361772 112362069 -33227219 + AluY SINE Alu 1 298 -13 2090 129 3 0 chr10 112362108 112362403 -33226885 + AluSx SINE Alu 1 296 -16 2054 136 0 29 chr10 112362403 112362712 -33226576 + AluSg1 SINE Alu 1 300 -9 2012 121 20 10 chr10 112363214 112363519 -33225769 + AluSg SINE Alu 1 308 -2 279 186 14 29 chr10 112363672 112363742 -33225546 + MIR3 SINE MIR 113 181 -27 249 227 0 30 chr10 112363781 112363847 -33225441 + Charlie8 DNA MER1_type 54 117 -2300 1929 125 34 34 chr10 112363859 112364154 -33225134 + AluSx SINE Alu 1 295 -17 2488 78 0 0 chr10 112364465 112364771 -33224517 + AluSc SINE Alu 1 306 -3 2310 73 28 3 chr10 112364822 112365109 -33224179 - AluSx SINE Alu -18 294 1 2079 71 4 0 chr10 112365133 112365385 -33223903 - AluSq SINE Alu -2 311 59 327 255 113 49 chr10 112365614 112365818 -33223470 - MIR SINE MIR 0 262 46 268 128 64 0 chr10 112365943 112365990 -33223298 - L2 LINE L2 -3 3269 3220 2260 80 38 0 chr10 112366253 112366541 -33222747 + AluSp SINE Alu 1 299 -14 25 31 0 0 chr10 112368251 112368283 -33221005 + GC_rich Low_complexity Low_complexity 1 32 0 231 158 18 18 chr10 112368422 112368479 -33220809 + (CCCCG)n Simple_repeat Simple_repeat 3 59 0 606 297 25 17 chr10 112368830 112369066 -33220222 + MIR SINE MIR 15 252 -10 622 304 129 18 chr10 112369176 112369616 -33219672 - L3 LINE CR1 -235 1342 854 2420 99 0 0 chr10 112369767 112370079 -33219209 + AluSx SINE Alu 1 312 0 252 232 192 0 chr10 112370182 112370307 -33218981 + L1ME4a LINE L1 5968 6116 -5 322 185 134 25 chr10 112370365 112370484 -33218804 + L1MB4 LINE L1 5171 5302 -844 2726 45 0 0 chr10 112370488 112370799 -33218489 + AluY SINE Alu 1 311 0 2132 129 0 0 chr10 112370805 112371092 -33218196 + AluSg SINE Alu 24 310 0 244 263 26 0 chr10 112371092 112371168 -33218120 + L1M2 LINE L1 5728 5805 -486 1277 160 0 22 chr10 112371183 112371414 -33217874 + AluJo SINE Alu 87 312 0 2118 134 57 70 chr10 112371549 112371989 -33217299 + L1MD3 LINE L1 7552 7985 -10 430 251 173 28 chr10 112372604 112372859 -33216429 - L2 LINE L2 -23 3290 2999 1939 156 9 29 chr10 112372884 112373199 -33216089 + AluJo SINE Alu 1 309 -3 265 270 0 14 chr10 112373199 112373262 -33216026 + GA-rich Low_complexity Low_complexity 13 76 0 1587 137 63 27 chr10 112373853 112374192 -33215096 + L1MB4 LINE L1 5436 5829 -339 1825 152 35 0 chr10 112374192 112374481 -33214807 + AluSx SINE Alu 1 299 -13 1587 137 63 27 chr10 112374481 112374527 -33214761 + L1MB4 LINE L1 5829 5872 -296 932 139 70 0 chr10 112374527 112374675 -33214613 + AluSg/x SINE Alu 136 297 -15 1946 150 0 0 chr10 112374675 112374988 -33214300 + L1MB4 LINE L1 5868 6180 0 317 318 98 41 chr10 112375039 112375476 -33213812 + L2 LINE L2 2852 3313 0 2219 95 7 13 chr10 112375575 112375879 -33213409 + AluSg SINE Alu 1 302 -8 2238 98 3 3 chr10 112376171 112376466 -33212822 + AluSp SINE Alu 1 295 -18 1619 97 0 0 chr10 112376474 112376680 -33212608 + AluY SINE Alu 1 206 -105 200 225 12 38 chr10 112376747 112376827 -33212461 + (TTATA)n Simple_repeat Simple_repeat 2 79 0 644 270 93 52 chr10 112376879 112377264 -33212024 + L1MC4a LINE L1 6217 6617 -1191 2019 226 60 65 chr10 112377269 112377491 -33211797 + L1MB7 LINE L1 2612 2834 -3312 2282 109 0 0 chr10 112377491 112377793 -33211495 + AluSc SINE Alu 1 302 -7 2019 226 60 65 chr10 112377793 112378233 -33211055 + L1MB7 LINE L1 2834 3270 -2876 2184 110 3 10 chr10 112378233 112378543 -33210745 + AluSx SINE Alu 1 308 -4 2019 226 60 65 chr10 112378543 112378783 -33210505 + L1MB7 LINE L1 3270 3510 -2636 909 199 6 0 chr10 112378785 112378941 -33210347 + FAM SINE Alu 1 157 -18 381 43 0 0 chr10 112378945 112378992 -33210296 + (CA)n Simple_repeat Simple_repeat 2 48 0 760 188 0 7 chr10 112378992 112379141 -33210147 + L1MB7 LINE L1 4263 4410 -1736 1119 190 8 38 chr10 112379141 112379378 -33209910 + AluJo SINE Alu 81 310 -2 2089 184 47 31 chr10 112379378 112380431 -33208857 + L1MB7 LINE L1 4411 5445 -739 2249 78 18 7 chr10 112380431 112380715 -33208573 + AluSc SINE Alu 1 287 -22 2089 184 47 31 chr10 112380715 112380883 -33208405 + L1MB7 LINE L1 5445 5609 -575 1645 182 3 17 chr10 112380883 112381180 -33208108 - AluJo SINE Alu -19 293 1 2089 184 47 31 chr10 112381180 112381268 -33208020 + L1MB7 LINE L1 5609 5694 -490 903 176 0 57 chr10 112381268 112381444 -33207844 + FRAM SINE Alu 1 166 0 2089 184 47 31 chr10 112381444 112381721 -33207567 + L1MB7 LINE L1 5694 6163 -21 2309 84 7 0 chr10 112381721 112382008 -33207280 - AluSc SINE Alu -16 293 5 2089 184 47 31 chr10 112382008 112382026 -33207262 + L1MB7 LINE L1 6163 6179 -5 1127 237 87 46 chr10 112382031 112382469 -33206819 + L1ME3 LINE L1 5263 5718 -444 2618 237 88 15 chr10 112382528 112383350 -33205938 - L1ME1 LINE L1 -31 6135 5254 1430 122 9 45 chr10 112383431 112383653 -33205635 + AluSx SINE Alu 1 214 -98 1508 199 7 17 chr10 112383653 112383945 -33205343 + AluJo SINE Alu 1 289 -23 2386 91 0 0 chr10 112383951 112384248 -33205040 - AluSc SINE Alu -12 297 1 531 188 38 50 chr10 112384270 112384430 -33204858 + L1ME3 LINE L1 5734 5891 -271 1168 196 14 61 chr10 112384780 112384904 -33204384 - AluJo SINE Alu -7 305 177 2252 112 3 0 chr10 112384904 112385208 -33204080 + AluSq SINE Alu 1 305 -8 1168 196 14 61 chr10 112385208 112385363 -33203925 - AluJo SINE Alu -135 177 39 2339 95 7 0 chr10 112385368 112385662 -33203626 - AluSp SINE Alu -17 296 1 2407 177 107 6 chr10 112385674 112386187 -33203101 - L1MD2 LINE L1 -1 6358 5794 1798 197 3 0 chr10 112386335 112386645 -33202643 - AluJo SINE Alu -1 311 1 2264 106 7 7 chr10 112386707 112387010 -33202278 - AluSx SINE Alu -9 303 1 2024 142 3 10 chr10 112387323 112387626 -33201662 - AluJb SINE Alu -11 301 1 810 156 127 53 chr10 112388708 112388952 -33200336 + L1MA8 LINE L1 6028 6289 -2 186 133 0 0 chr10 112388952 112388982 -33200306 + (CATATA)n Simple_repeat Simple_repeat 1 30 0 1906 163 0 7 chr10 112389031 112389319 -33199969 + AluJo SINE Alu 5 290 -22 1394 171 3 128 chr10 112389391 112389537 -33199751 + AluJo SINE Alu 1 81 -221 2092 110 10 17 chr10 112389537 112389827 -33199461 + AluSg SINE Alu 1 288 -22 1394 171 3 128 chr10 112389827 112390024 -33199264 + AluJo SINE Alu 81 301 -1 203 156 0 0 chr10 112390187 112390219 -33199069 + (CA)n Simple_repeat Simple_repeat 2 33 0 1726 170 23 13 chr10 112390219 112390519 -33198769 - AluJb SINE Alu -9 303 1 872 133 0 0 chr10 112391469 112391597 -33197691 + FLAM_C SINE Alu 1 128 -5 2016 125 24 3 chr10 112391620 112391916 -33197372 + AluSq SINE Alu 1 302 -11 2323 61 4 7 chr10 112391940 112392218 -33197070 - AluY SINE Alu -13 298 22 25 0 0 0 chr10 112392218 112392243 -33197045 + AT_rich Low_complexity Low_complexity 1 25 0 2152 123 7 0 chr10 112392253 112392553 -33196735 + AluSx SINE Alu 8 309 -3 932 171 14 0 chr10 112392553 112392719 -33196569 + AluSg/x SINE Alu 134 301 0 774 182 0 0 chr10 112392719 112392840 -33196448 - AluJo/FLAM SINE Alu -190 122 2 2307 87 17 0 chr10 112393028 112393327 -33195961 + AluY SINE Alu 1 304 -7 1043 91 0 0 chr10 112393337 112393469 -33195819 + AluSg1 SINE Alu 1 132 -177 2484 86 0 0 chr10 112393506 112393808 -33195480 + AluSx SINE Alu 1 302 -10 1951 155 7 0 chr10 112393817 112394114 -33195174 + AluSx SINE Alu 1 299 -13 1034 153 0 77 chr10 112394115 112394298 -33194990 + AluSg1 SINE Alu 135 303 -9 416 242 193 20 chr10 112394362 112394535 -33194753 + MIR SINE MIR 2 189 -62 844 163 268 21 chr10 112396259 112396498 -33192790 - AluJb SINE Alu -14 298 1 1094 192 10 34 chr10 112397227 112397435 -33191853 - AluJo SINE Alu -23 289 87 1764 193 68 0 chr10 112397483 112397835 -33191453 - L1MB5 LINE L1 -8 6166 5791 514 207 50 0 chr10 112397833 112397954 -33191334 + L1M4 LINE L1 4914 5040 -1106 * 1590 142 17 85 chr10 112397958 112398253 -33191035 + AluJb SINE Alu 1 275 -37 1960 97 14 28 chr10 112398254 112398542 -33190746 + AluSc SINE Alu 12 295 -14 226 197 16 49 chr10 112398550 112398611 -33190677 + MER41B LTR ERV1 469 527 -108 189 107 0 0 chr10 112398625 112398653 -33190635 + (T)n Simple_repeat Simple_repeat 1 28 0 2301 116 0 0 chr10 112398790 112399092 -33190196 - AluSx SINE Alu -10 302 1 2198 120 0 37 chr10 112399385 112399709 -33189579 + AluSx SINE Alu 1 312 0 2341 83 3 17 chr10 112400169 112400469 -33188819 + AluSq SINE Alu 3 298 -15 282 226 16 0 chr10 112400513 112400575 -33188713 - MLT1L LTR MaLR -8 607 545 1598 199 0 10 chr10 112400643 112400945 -33188343 + AluJb SINE Alu 1 299 -13 238 286 24 36 chr10 112401194 112401278 -33188010 - MLT1L LTR MaLR -532 83 1 2138 133 0 0 chr10 112401384 112401686 -33187602 - AluJb SINE Alu -10 302 1 1718 154 3 63 chr10 112402049 112402196 -33187092 + AluJo SINE Alu 1 155 -157 2375 92 0 16 chr10 112402196 112402510 -33186778 + AluSc SINE Alu 1 309 0 1718 154 3 63 chr10 112402510 112402693 -33186595 + AluJo SINE Alu 155 311 -1 320 344 44 19 chr10 112402909 112403069 -33186219 - MER5A DNA MER1_type 0 189 26 2544 115 60 23 chr10 112403472 112403906 -33185382 + LTR7 LTR ERV1 1 450 0 14544 180 16 30 chr10 112403906 112406358 -33182930 + HERVH LTR ERV1 1 2487 -5226 2482 68 0 26 chr10 112406358 112406668 -33182620 - AluY SINE Alu -9 302 1 14544 180 16 30 chr10 112406668 112409430 -33179858 + HERVH LTR ERV1 2487 4999 -2714 2087 64 64 11 chr10 112409430 112409710 -33179578 + AluY SINE Alu 1 295 -16 14544 180 16 30 chr10 112409710 112410711 -33178577 + HERVH LTR ERV1 4999 6013 -1700 3666 96 11 7 chr10 112410707 112411262 -33178026 + HERVH LTR ERV1 7157 7713 0 * 2211 127 56 16 chr10 112411262 112411688 -33177600 + LTR7 LTR ERV1 1 443 -7 1823 186 98 46 chr10 112411932 112412410 -33176878 + MLT1D LTR MaLR 3 505 0 1334 72 6 0 chr10 112412496 112412663 -33176625 - AluY SINE Alu -8 303 136 2781 35 0 0 chr10 112412663 112412973 -33176315 - AluYa5 SINE Alu -1 310 1 333 119 0 3 chr10 112413210 112413437 -33175851 + AluSx SINE Alu 1 283 -17 216 0 0 0 chr10 112413440 112413464 -33175824 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1272 126 20 0 chr10 112413464 112413662 -33175626 - MER4D LTR ERV1 -12 891 690 2424 85 0 0 chr10 112415341 112415636 -33173652 + AluY SINE Alu 1 295 -16 2473 80 0 3 chr10 112415661 112415960 -33173328 + AluY SINE Alu 1 298 -13 4187 123 25 31 chr10 112416203 112416918 -33172370 - MER4D LTR ERV1 -192 711 1 4143 159 8 32 chr10 112416918 112417082 -33172206 - MER4D LTR ERV1 -142 761 594 2358 111 0 0 chr10 112417082 112417380 -33171908 + AluSx SINE Alu 1 298 -14 4143 159 8 32 chr10 112417380 112417440 -33171848 - MER4D LTR ERV1 -309 594 534 2372 85 7 0 chr10 112417440 112417734 -33171554 + AluY SINE Alu 1 296 -15 216 0 0 0 chr10 112417735 112417759 -33171529 + (TA)n Simple_repeat Simple_repeat 1 24 0 4143 159 8 32 chr10 112417759 112418309 -33170979 - MER4D LTR ERV1 -368 535 3 355 237 10 72 chr10 112418315 112418412 -33170876 - L1MC4 LINE L1 -1339 6703 6613 383 214 20 41 chr10 112418421 112418519 -33170769 - L1MC4 LINE L1 -1333 6709 6614 274 119 60 0 chr10 112418525 112418609 -33170679 + (TA)n Simple_repeat Simple_repeat 1 89 0 333 0 0 0 chr10 112418609 112418646 -33170642 + (CA)n Simple_repeat Simple_repeat 2 38 0 1056 177 22 6 chr10 112418659 112418840 -33170448 + AluJb SINE Alu 129 312 0 205 176 0 0 chr10 112418843 112418877 -33170411 + GA-rich Low_complexity Low_complexity 3 36 0 411 201 8 157 chr10 112418889 112418950 -33170338 - L1ME3 LINE L1 -66 6096 6028 1629 208 0 22 chr10 112418950 112419267 -33170021 + AluJo SINE Alu 1 310 -2 411 201 8 157 chr10 112419267 112419454 -33169834 - L1ME3 LINE L1 -134 6028 5885 654 136 29 0 chr10 112419454 112419557 -33169731 - AluSp/q SINE Alu -6 307 202 339 165 204 0 chr10 112419557 112419660 -33169628 - L1ME3 LINE L1 -278 5892 5769 2083 133 0 41 chr10 112419669 112419814 -33169474 + AluSq SINE Alu 1 150 -163 2367 97 0 0 chr10 112419814 112420103 -33169185 + AluSc SINE Alu 1 289 -20 2083 133 0 41 chr10 112420103 112420272 -33169016 + AluSq SINE Alu 150 302 -11 314 136 0 0 chr10 112420272 112420316 -33168972 + AluSp SINE Alu 134 177 -126 1635 99 121 11 chr10 112420330 112420602 -33168686 + MSTA LTR MaLR 127 428 0 790 115 255 0 chr10 112420602 112420759 -33168529 - MSTA LTR MaLR -231 197 1 9195 151 24 62 chr10 112420759 112421072 -33168216 - MSTA-int LTR MaLR 0 1651 1328 2004 108 3 67 chr10 112421072 112421386 -33167902 - AluSg SINE Alu -16 294 1 9195 151 24 62 chr10 112421386 112422789 -33166499 - MSTA-int LTR MaLR -323 1328 1 1969 139 103 64 chr10 112422789 112423010 -33166278 - MSTA LTR MaLR 0 428 217 2316 108 0 0 chr10 112423010 112423307 -33165981 - AluSg SINE Alu -13 297 1 1969 139 103 64 chr10 112423307 112423323 -33165965 - MSTA LTR MaLR -211 217 203 2410 92 0 3 chr10 112423323 112423629 -33165659 - AluY SINE Alu -6 305 1 1969 139 103 64 chr10 112423629 112423799 -33165489 - MSTA LTR MaLR -225 203 4 1766 161 3 21 chr10 112423799 112424085 -33165203 + AluJb SINE Alu 17 297 -15 2897 136 181 26 chr10 112424085 112424424 -33164864 + Tigger1 DNA MER2_type 1584 1869 -549 1883 176 0 0 chr10 112424424 112424714 -33164574 + AluJb SINE Alu 6 295 -17 2897 136 181 26 chr10 112424714 112424737 -33164551 + Tigger1 DNA MER2_type 1869 1887 -531 2160 120 3 20 chr10 112424737 112425037 -33164251 + AluSx SINE Alu 2 296 -16 2897 136 181 26 chr10 112425037 112425109 -33164179 + Tigger1 DNA MER2_type 1887 1946 -472 2143 102 4 0 chr10 112425109 112425383 -33163905 + AluSq SINE Alu 1 275 -38 2897 136 181 26 chr10 112425383 112425668 -33163620 + Tigger1 DNA MER2_type 1946 2417 -1 313 250 50 40 chr10 112425943 112426043 -33163245 - L1MC4 LINE L1 -1334 6708 6608 776 214 19 7 chr10 112426366 112426520 -33162768 + MIR SINE MIR 2 157 -105 2020 139 13 3 chr10 112426546 112426847 -33162441 + AluSx SINE Alu 3 306 -6 2173 115 0 3 chr10 112426847 112427133 -33162155 + AluSq SINE Alu 1 285 -28 351 0 0 0 chr10 112427133 112427172 -33162116 + (CA)n Simple_repeat Simple_repeat 2 40 0 2348 97 0 0 chr10 112427498 112427798 -33161490 - AluSx SINE Alu -8 304 5 2428 48 0 51 chr10 112428158 112428472 -33160816 - AluY SINE Alu -13 298 1 246 345 43 17 chr10 112428595 112428711 -33160577 + MIR SINE MIR 32 150 -58 1496 146 69 56 chr10 112428875 112429163 -33160125 + AluJo SINE Alu 1 292 -20 633 231 0 8 chr10 112429531 112429652 -33159636 + MER5B DNA MER1_type 3 122 -56 1835 139 3 48 chr10 112429653 112429962 -33159326 - AluSg SINE Alu -10 300 6 1100 88 0 7 chr10 112429964 112430101 -33159187 - AluSc SINE Alu -173 136 1 302 190 17 0 chr10 112430104 112430162 -33159126 + MER5B DNA MER1_type 118 176 -2 359 295 208 17 chr10 112430276 112430449 -33158839 - MIR SINE MIR -3 259 54 342 299 99 94 chr10 112430471 112430597 -33158691 - L2 LINE L2 -79 3193 3069 2133 97 0 0 chr10 112430597 112430866 -33158422 + AluSg1 SINE Alu 24 292 -17 261 0 0 0 chr10 112430866 112430895 -33158393 + (TTAAA)n Simple_repeat Simple_repeat 2 30 0 342 299 99 94 chr10 112430895 112431151 -33158137 - L2 LINE L2 -202 3070 2808 1839 159 19 16 chr10 112431250 112431558 -33157730 + AluJb SINE Alu 1 309 -3 3735 144 59 90 chr10 112431573 112431812 -33157476 + L1MB3 LINE L1 5095 5340 -843 2205 121 0 0 chr10 112431812 112432109 -33157179 + AluSx SINE Alu 1 297 -15 3735 144 59 90 chr10 112432109 112432466 -33156822 + L1MB3 LINE L1 5340 5707 -476 2264 121 0 34 chr10 112432466 112432789 -33156499 + AluSx SINE Alu 1 312 0 3735 144 59 90 chr10 112432789 112433096 -33156192 + L1MB3 LINE L1 5707 6022 -161 2175 126 3 10 chr10 112433096 112433406 -33155882 + AluSq SINE Alu 1 308 -5 3735 144 59 90 chr10 112433406 112433505 -33155783 + L1MB3 LINE L1 6022 6068 -115 2375 78 7 0 chr10 112433505 112433798 -33155490 + AluY SINE Alu 1 295 -16 3735 144 59 90 chr10 112433798 112433910 -33155378 + L1MB3 LINE L1 6068 6182 -1 985 118 0 21 chr10 112433915 112434059 -33155229 + FLAM_C SINE Alu 1 141 -2 575 310 121 39 chr10 112434090 112434477 -33154811 - L2 LINE L2 -634 2680 2262 2489 50 0 13 chr10 112434482 112434784 -33154504 - AluY SINE Alu -13 298 1 253 316 0 0 chr10 112434869 112434945 -33154343 + L1MC5 LINE L1 7810 7885 -76 235 318 45 11 chr10 112435048 112435136 -33154152 - MIR SINE MIR -3 259 169 1615 200 0 28 chr10 112435313 112435603 -33153685 + AluJo SINE Alu 1 282 -30 2543 69 0 0 chr10 112435603 112435906 -33153382 - AluY SINE Alu -8 303 1 1969 147 0 14 chr10 112435949 112436241 -33153047 + AluSx SINE Alu 17 304 -8 330 317 166 46 chr10 112436261 112436362 -33152926 - L2 LINE L2 -1292 2022 1934 2297 80 0 14 chr10 112436362 112436678 -33152610 + AluSq SINE Alu 1 312 0 330 317 166 46 chr10 112436678 112437052 -33152236 - L2 LINE L2 -1380 1934 1489 2225 134 0 3 chr10 112437540 112437719 -33151569 - AluJo SINE Alu 0 312 133 2265 97 0 20 chr10 112437719 112438017 -33151271 - AluSc SINE Alu -17 292 1 2225 134 0 3 chr10 112438017 112438150 -33151138 - AluJo SINE Alu -179 133 1 329 0 24 0 chr10 112438188 112438229 -33151059 + (TTCA)n Simple_repeat Simple_repeat 1 42 0 371 332 88 67 chr10 112438231 112438514 -33150774 - L2 LINE L2 -16 3256 2968 316 260 75 130 chr10 112438573 112438773 -33150515 - MER5A DNA MER1_type 0 189 1 2398 99 0 0 chr10 112438832 112439135 -33150153 - AluSx SINE Alu -9 303 1 270 217 98 43 chr10 112439962 112440054 -33149234 + MIR3 SINE MIR 60 156 -52 2288 94 3 10 chr10 112440208 112440506 -33148782 - AluSx SINE Alu -1 311 16 847 248 59 35 chr10 112440578 112440832 -33148456 - MIR SINE MIR 0 262 3 2312 89 0 0 chr10 112440962 112441274 -33148014 - AluSg SINE Alu 0 312 1 182 309 63 16 chr10 112441279 112441405 -33147883 + MIR SINE MIR 129 260 -2 770 111 0 144 chr10 112441438 112441485 -33147803 - L1MB3 LINE L1 0 6183 6131 2257 108 3 0 chr10 112441485 112441780 -33147508 + AluSp SINE Alu 2 297 -16 770 111 0 144 chr10 112441780 112441791 -33147497 - L1MB3 LINE L1 -52 6131 6120 1791 148 36 4 chr10 112441791 112442068 -33147220 + AluJo SINE Alu 1 286 -26 2059 119 7 3 chr10 112442070 112442364 -33146924 + AluSq SINE Alu 1 295 -18 770 111 0 144 chr10 112442364 112442481 -33146807 - L1MB3 LINE L1 -64 6119 6030 221 314 120 31 chr10 112442603 112442794 -33146494 + MIR SINE MIR 47 254 -8 2201 117 3 0 chr10 112443229 112443527 -33145761 - AluSx SINE Alu -13 299 1 1907 170 13 0 chr10 112443617 112443923 -33145365 - AluJb SINE Alu -2 310 1 328 301 67 48 chr10 112445424 112445633 -33143655 + MIR SINE MIR 49 261 -1 456 274 21 65 chr10 112445844 112446030 -33143258 - MIR SINE MIR -36 226 49 318 310 11 64 chr10 112446037 112446224 -33143064 + MER117 DNA MER1_type 16 192 -5 1513 155 0 0 chr10 112446303 112446529 -33142759 + AluJb SINE Alu 85 310 -2 379 272 89 49 chr10 112446548 112446772 -33142516 + MIR SINE MIR 24 256 -6 1649 132 37 40 chr10 112446786 112447058 -33142230 - AluSx SINE Alu -41 271 1 254 265 73 37 chr10 112447058 112447194 -33142094 + L1ME LINE L1 5700 5840 -281 23 54 0 0 chr10 112447223 112447260 -33142028 + AT_rich Low_complexity Low_complexity 1 37 0 1479 109 9 33 chr10 112447611 112447822 -33141466 - AluJb SINE Alu -20 292 87 191 154 0 19 chr10 112448132 112448184 -33141104 + A-rich Low_complexity Low_complexity 2 52 0 992 194 6 0 chr10 112448312 112448477 -33140811 - FRAM SINE Alu 0 166 1 755 173 0 6 chr10 112448910 112449089 -33140199 + (CCA)n Simple_repeat Simple_repeat 3 180 0 1254 112 194 63 chr10 112449693 112449827 -33139461 + AluSq SINE Alu 1 116 -187 2395 99 3 0 chr10 112449827 112450130 -33139158 + AluSg SINE Alu 1 304 -6 1254 112 194 63 chr10 112450130 112450231 -33139057 + AluSq SINE Alu 116 202 -101 2344 98 7 0 chr10 112450231 112450528 -33138760 - AluSx SINE Alu -13 299 1 1254 112 194 63 chr10 112450528 112450559 -33138729 + AluSq SINE Alu 202 303 0 515 219 140 82 chr10 112451405 112451684 -33137604 - MER102a DNA MER1_type -10 320 26 21 0 0 0 chr10 112452624 112452645 -33136643 + GC_rich Low_complexity Low_complexity 1 21 0 351 0 0 0 chr10 112454226 112454265 -33135023 + (CA)n Simple_repeat Simple_repeat 1 39 0 352 284 111 12 chr10 112456639 112456801 -33132487 - MER5A DNA MER1_type -1 188 11 218 180 40 0 chr10 112458247 112458297 -33130991 - MIR SINE MIR 0 262 211 187 184 26 0 chr10 112458482 112458520 -33130768 - MIR SINE MIR -130 78 40 2377 77 0 55 chr10 112459075 112459400 -33129888 - AluSq SINE Alu -6 307 1 756 156 0 0 chr10 112459440 112459562 -33129726 - AluSg/x SINE Alu -13 299 178 274 154 0 0 chr10 112459562 112459601 -33129687 - AluS SINE Alu -237 66 28 458 255 148 34 chr10 112459604 112459753 -33129535 + MER20 DNA MER1_type 54 219 0 23 0 0 0 chr10 112459868 112459891 -33129397 + AT_rich Low_complexity Low_complexity 1 23 0 2308 98 0 3 chr10 112459907 112460212 -33129076 + AluSq SINE Alu 1 304 -9 465 222 10 0 chr10 112460212 112460311 -33128977 - L1MD3 LINE L1 -347 7648 7549 2243 134 3 0 chr10 112460312 112460617 -33128671 - AluSx SINE Alu -6 306 1 1742 190 124 177 chr10 112460624 112461024 -33128264 - L1M4c LINE L1 -4167 2479 2059 2292 117 0 7 chr10 112461024 112461333 -33127955 - AluSx SINE Alu -5 307 1 1742 190 124 177 chr10 112461333 112461725 -33127563 - L1M4c LINE L1 -4587 2059 1648 1861 146 19 53 chr10 112461725 112462048 -33127240 - AluJb SINE Alu 0 312 1 1505 189 19 26 chr10 112462051 112462358 -33126930 - AluJo SINE Alu -7 305 1 721 183 8 23 chr10 112462360 112462491 -33126797 - FLAM_A SINE Alu -4 129 1 1742 190 124 177 chr10 112462491 112462855 -33126433 - L1M4c LINE L1 -5001 1645 1377 1562 223 39 23 chr10 112462888 112463274 -33126014 - L1M4c LINE L1 -5801 741 350 1226 199 94 85 chr10 112463265 112463578 -33125710 - L1M4c LINE L1 -6131 411 91 * 2304 72 0 4 chr10 112463578 112463892 -33125396 - AluSc SINE Alu 0 313 1 1226 199 94 85 chr10 112463892 112463979 -33125309 - L1M4c LINE L1 -6451 91 6 665 173 0 0 chr10 112463984 112464094 -33125194 - L1MD3 LINE L1 -496 7499 7390 1091 218 0 0 chr10 112464094 112464287 -33125001 + MER58A DNA MER1_type 2 194 -30 541 227 9 0 chr10 112464308 112464418 -33124870 - MLT1F1 LTR MaLR -451 116 6 766 191 46 0 chr10 112464420 112464572 -33124716 - L1MD3 LINE L1 -717 7278 7120 1224 140 0 0 chr10 112464573 112464751 -33124537 - AluSg/x SINE Alu 0 310 133 2278 103 0 3 chr10 112464751 112465052 -33124236 - AluSx SINE Alu -11 301 2 281 298 48 10 chr10 112465190 112465294 -33123994 + MIR SINE MIR 77 184 -78 180 217 0 0 chr10 112465360 112465406 -33123882 + CT-rich Low_complexity Low_complexity 4 49 0 2428 79 0 13 chr10 112465770 112466075 -33123213 - AluSq SINE Alu -12 301 1 2158 130 72 17 chr10 112466122 112466467 -33122821 + THE1B LTR MaLR 1 364 0 11571 95 7 16 chr10 112466467 112467746 -33121542 + THE1B-int LTR MaLR 1 1291 -289 2282 83 0 0 chr10 112467746 112468024 -33121264 + AluY SINE Alu 1 278 -33 198 0 0 0 chr10 112468024 112468046 -33121242 + (CA)n Simple_repeat Simple_repeat 1 22 0 11571 95 7 16 chr10 112468046 112468360 -33120928 + THE1B-int LTR MaLR 1289 1580 0 2005 131 104 18 chr10 112468360 112468695 -33120593 + THE1B LTR MaLR 1 364 0 1782 167 0 31 chr10 112468945 112469261 -33120027 - AluJb SINE Alu 0 307 1 350 287 19 9 chr10 112469477 112469585 -33119703 - MIR3 SINE MIR -30 178 70 403 269 49 49 chr10 112469585 112469886 -33119402 - MLT1J2 LTR MaLR 0 450 66 2134 111 26 13 chr10 112470139 112470445 -33118843 + AluSx SINE Alu 1 310 -2 2315 121 0 0 chr10 112471397 112471702 -33117586 + AluSx SINE Alu 1 305 -7 1750 181 44 3 chr10 112471707 112472050 -33117238 + L1MB4 LINE L1 5823 6179 -1 547 266 58 0 chr10 112472062 112472240 -33117048 + MIR SINE MIR 3 191 -63 1759 179 0 28 chr10 112472289 112472608 -33116680 + AluJb SINE Alu 1 310 -2 247 260 0 0 chr10 112473375 112473425 -33115863 + polypurine Low_complexity Low_complexity 1 50 0 2275 87 3 0 chr10 112473622 112473909 -33115379 - AluSc SINE Alu -21 288 1 2045 137 0 22 chr10 112474410 112474767 -33114521 - AluSx SINE Alu 0 355 6 247 293 53 15 chr10 112474871 112475004 -33114284 + L1MC/D LINE L1 5767 5904 -1904 23 0 0 0 chr10 112475018 112475041 -33114247 + AT_rich Low_complexity Low_complexity 1 23 0 194 239 0 0 chr10 112475094 112475140 -33114148 + L2 LINE L2 3221 3266 -6 245 185 148 19 chr10 112475279 112475333 -33113955 + tRNA-Phe-TTC tRNA tRNA 8 68 -8 2045 125 0 17 chr10 112475408 112475543 -33113745 + AluSx SINE Alu 1 137 -175 1981 112 84 0 chr10 112475543 112475828 -33113460 + AluSq SINE Alu 1 309 -4 2045 125 0 17 chr10 112475828 112475989 -33113299 + AluSx SINE Alu 137 292 -20 557 241 33 95 chr10 112476003 112476244 -33113044 - L1MC4 LINE L1 0 8042 7817 3890 201 59 73 chr10 112476252 112476993 -33112295 - L1MD2 LINE L1 -2 6357 5606 1893 153 0 20 chr10 112476993 112477294 -33111994 - AluSx SINE Alu -17 295 1 3890 201 59 73 chr10 112477294 112477639 -33111649 - L1MD2 LINE L1 -753 5606 5257 2462 78 0 7 chr10 112477639 112477945 -33111343 - AluSx SINE Alu -8 304 1 3890 201 59 73 chr10 112477945 112478019 -33111269 - L1MD2 LINE L1 -1102 5257 5183 1716 109 134 25 chr10 112478019 112478295 -33110993 - AluSg SINE Alu -4 306 1 2466 70 3 0 chr10 112478305 112478604 -33110684 - AluY SINE Alu -11 300 1 3890 201 59 73 chr10 112478604 112478712 -33110576 - L1MD2 LINE L1 -1185 5174 5090 183 80 0 0 chr10 112478845 112478870 -33110418 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 985 174 19 0 chr10 112478878 112479033 -33110255 - FAM SINE Alu -17 158 1 274 307 140 0 chr10 112479315 112479465 -33109823 - L2 LINE L2 -924 2390 2220 311 337 46 31 chr10 112479501 112479697 -33109591 + L2 LINE L2 3115 3313 0 204 359 29 19 chr10 112479715 112479818 -33109470 - MIR SINE MIR -2 260 157 228 306 59 0 chr10 112479838 112479923 -33109365 - MER5B DNA MER1_type -87 91 2 2077 130 0 0 chr10 112480096 112480436 -33108852 - AluSq SINE Alu 0 340 1 219 191 44 59 chr10 112481226 112481294 -33107994 - MIR SINE MIR -176 86 20 2311 79 14 0 chr10 112481378 112481669 -33107619 - AluSp SINE Alu -18 295 1 2060 104 3 45 chr10 112482203 112482511 -33106777 + AluSg1 SINE Alu 1 295 -14 2316 75 3 33 chr10 112482863 112483168 -33106120 + AluSg SINE Alu 1 296 -14 879 108 0 8 chr10 112483168 112483288 -33106000 + AluSg/x SINE Alu 132 250 -59 2306 92 0 3 chr10 112483398 112483691 -33105597 - AluSx SINE Alu -20 292 1 22 35 0 0 chr10 112483701 112483730 -33105558 + AT_rich Low_complexity Low_complexity 1 29 0 339 341 16 24 chr10 112483800 112483923 -33105365 - MER5A DNA MER1_type -3 186 65 2303 108 0 19 chr10 112483977 112484293 -33104995 + AluSg SINE Alu 1 310 0 352 136 0 45 chr10 112484293 112484359 -33104929 - L1PA16 LINE L1 -10 6156 6094 516 135 0 0 chr10 112484362 112484436 -33104852 + AluS SINE Alu 2 75 -238 1813 112 0 24 chr10 112484536 112484785 -33104503 + AluSg SINE Alu 50 292 -18 311 139 128 23 chr10 112484792 112484828 -33104460 + L1MC4a LINE L1 5903 5934 -1874 2455 88 7 0 chr10 112484828 112485136 -33104152 + AluSp SINE Alu 1 310 -3 2332 109 0 3 chr10 112485136 112485494 -33103794 + AluSx SINE Alu 1 312 0 311 139 128 23 chr10 112485494 112485542 -33103746 + L1MC4a LINE L1 5933 5997 -1811 702 204 174 45 chr10 112485553 112485673 -33103615 + L1MC4a LINE L1 6051 6154 -1654 1852 144 6 10 chr10 112485673 112485985 -33103303 + AluY SINE Alu 1 311 0 297 0 0 0 chr10 112485985 112486018 -33103270 + (TA)n Simple_repeat Simple_repeat 2 34 0 702 204 174 45 chr10 112486018 112486160 -33103128 + L1MC4a LINE L1 6153 6348 -1460 302 236 0 0 chr10 112486163 112486218 -33103070 + Tigger6 DNA MER2_type 1 55 -1028 1750 98 4 4 chr10 112486322 112486556 -33102732 + AluSg/x SINE Alu 66 299 -13 1680 110 121 11 chr10 112486558 112486989 -33102299 + AluSx SINE Alu 1 461 0 762 316 127 28 chr10 112487004 112487166 -33102122 - L3 LINE CR1 -32 1545 1401 2132 141 0 0 chr10 112487166 112487464 -33101824 + AluSx SINE Alu 1 298 -14 762 316 127 28 chr10 112487464 112487843 -33101445 - L3 LINE CR1 -176 1401 950 1110 225 10 48 chr10 112488091 112488384 -33100904 - L1MC/D LINE L1 -2153 5655 5374 1344 170 0 90 chr10 112488410 112488699 -33100589 - AluJb SINE Alu -14 298 36 1297 175 0 0 chr10 112488701 112488912 -33100376 - AluJb SINE Alu -17 295 85 1991 120 3 7 chr10 112489052 112489336 -33099952 - AluSx SINE Alu -1 311 29 2079 128 3 16 chr10 112489607 112489744 -33099544 + AluSp SINE Alu 1 138 -175 2857 16 0 0 chr10 112489744 112490053 -33099235 + AluYa5 SINE Alu 1 309 -2 2079 128 3 16 chr10 112490053 112490221 -33099067 + AluSp SINE Alu 138 302 -11 2345 83 3 10 chr10 112490223 112490525 -33098763 + AluY SINE Alu 1 300 -11 2059 103 0 7 chr10 112490550 112490822 -33098466 + AluSq SINE Alu 5 274 -39 1823 154 0 11 chr10 112490987 112491273 -33098015 + AluJb SINE Alu 1 283 -29 225 83 0 0 chr10 112491327 112491363 -33097925 + (A)n Simple_repeat Simple_repeat 1 36 0 2258 90 7 0 chr10 112491752 112492041 -33097247 - AluSq SINE Alu -20 293 3 1822 156 28 7 chr10 112492045 112492334 -33096954 - AluSx SINE Alu -17 295 1 2032 152 3 0 chr10 112492379 112492688 -33096600 - AluSx SINE Alu -2 310 1 2335 112 0 0 chr10 112492943 112493255 -33096033 - AluSx SINE Alu 0 312 1 230 211 88 0 chr10 112493255 112493312 -33095976 - L1ME3 LINE L1 -31 6131 6070 1573 162 94 0 chr10 112493773 112494038 -33095250 + AluJb SINE Alu 6 295 -17 1936 106 7 43 chr10 112494146 112494448 -33094840 + AluSq SINE Alu 3 293 -20 491 68 0 0 chr10 112494448 112494507 -33094781 + (CA)n Simple_repeat Simple_repeat 2 60 0 1764 167 9 57 chr10 112494521 112494839 -33094449 + AluSg SINE Alu 1 303 -7 230 56 28 0 chr10 112494839 112494875 -33094413 + (TA)n Simple_repeat Simple_repeat 2 38 0 295 316 11 11 chr10 112494891 112494986 -33094302 - MIR3 SINE MIR -102 106 12 2342 93 0 0 chr10 112495497 112495786 -33093502 + AluSg SINE Alu 1 289 -21 765 179 97 0 chr10 112496334 112496468 -33092820 + FRAM SINE Alu 1 146 -30 218 32 32 0 chr10 112496472 112496503 -33092785 + (TAAAA)n Simple_repeat Simple_repeat 2 33 0 254 277 0 0 chr10 112496513 112496578 -33092710 + MIR SINE MIR 2 66 -196 2121 122 51 0 chr10 112496581 112496876 -33092412 + AluSq SINE Alu 1 310 -3 681 242 61 6 chr10 112496903 112497068 -33092220 + MIR SINE MIR 57 230 -32 237 65 0 0 chr10 112497993 112498024 -33091264 + (TG)n Simple_repeat Simple_repeat 2 32 0 1510 173 0 4 chr10 112498481 112498724 -33090564 + AluSx SINE Alu 1 242 -70 2003 114 0 0 chr10 112499031 112499295 -33089993 + AluSx SINE Alu 13 276 -36 185 65 32 0 chr10 112499304 112499335 -33089953 + (TAAAA)n Simple_repeat Simple_repeat 2 33 0 666 216 0 0 chr10 112499595 112499711 -33089577 + MER58B DNA MER1_type 226 341 0 490 275 108 0 chr10 112499740 112499907 -33089381 + MIR SINE MIR 29 213 -49 279 0 0 0 chr10 112500285 112500316 -33088972 + (TC)n Simple_repeat Simple_repeat 2 32 0 180 0 0 0 chr10 112500315 112500335 -33088953 + (TA)n Simple_repeat Simple_repeat 1 20 0 * 243 0 0 0 chr10 112500334 112500361 -33088927 + (CA)n Simple_repeat Simple_repeat 2 28 0 1484 152 30 81 chr10 112500531 112500671 -33088617 + AluJo SINE Alu 1 120 -192 2390 90 0 0 chr10 112500671 112500970 -33088318 + AluY SINE Alu 1 299 -12 1484 152 30 81 chr10 112500970 112501125 -33088163 + AluJo SINE Alu 120 281 -31 1366 107 0 0 chr10 112501244 112501412 -33087876 - AluSq SINE Alu -145 168 1 256 299 221 28 chr10 112501414 112501848 -33087440 + L2 LINE L2 1988 2505 -809 455 215 148 101 chr10 112501898 112502042 -33087246 - MER20 DNA MER1_type 0 219 60 1917 139 30 10 chr10 112502042 112502344 -33086944 - AluSx SINE Alu -4 308 1 455 215 148 101 chr10 112502344 112502408 -33086880 - MER20 DNA MER1_type -159 60 1 759 284 64 5 chr10 112502539 112502976 -33086312 + MLT1J LTR MaLR 1 504 -7 272 224 92 0 chr10 112503006 112503082 -33086206 + MLT1J LTR MaLR 429 511 0 412 281 107 33 chr10 112503181 112503423 -33085865 + L2 LINE L2 2804 3063 -209 21 0 0 0 chr10 112504008 112504029 -33085259 + AT_rich Low_complexity Low_complexity 1 21 0 475 50 17 0 chr10 112505942 112506002 -33083286 - AluSp/q SINE Alu -18 295 235 2266 93 0 6 chr10 112506175 112506488 -33082800 + AluY SINE Alu 1 311 0 364 121 0 45 chr10 112506488 112506554 -33082734 - L1PA16 LINE L1 -10 6156 6094 2167 95 0 0 chr10 112506556 112506852 -33082436 + AluSx SINE Alu 1 296 -16 26 50 0 0 chr10 112507594 112507634 -33081654 + GC_rich Low_complexity Low_complexity 1 40 0 206 295 0 38 chr10 112507660 112507765 -33081523 + (CCG)n Simple_repeat Simple_repeat 2 102 0 402 284 64 98 chr10 112508062 112508157 -33081131 - MIR SINE MIR -3 259 162 635 137 145 8 chr10 112508157 112508274 -33081014 - FLAM_A SINE Alu 0 133 1 402 284 64 98 chr10 112508274 112508414 -33080874 - MIR SINE MIR -100 162 32 2249 79 0 10 chr10 112508551 112508855 -33080433 - AluSx SINE Alu -11 301 1 580 299 224 17 chr10 112509178 112509759 -33079529 - L2 LINE L2 -202 3070 2356 2069 118 0 0 chr10 112509764 112510051 -33079237 - AluSx SINE Alu -25 287 1 2171 118 0 0 chr10 112510056 112510361 -33078927 - AluSx SINE Alu -7 305 1 608 282 26 10 chr10 112510362 112510557 -33078731 - L2 LINE L2 -1342 1972 1775 1959 124 31 0 chr10 112511168 112511458 -33077830 - AluSq SINE Alu -14 299 1 1087 154 0 11 chr10 112511594 112511776 -33077512 - AluJo SINE Alu -132 180 1 1898 101 52 14 chr10 112511778 112512064 -33077224 - AluSx SINE Alu -15 297 1 2069 113 31 0 chr10 112512067 112512359 -33076929 - AluSx SINE Alu -11 301 1 1269 102 0 0 chr10 112513755 112513922 -33075366 - AluSg/x SINE Alu -16 296 130 194 88 0 29 chr10 112513922 112513956 -33075332 + (TATG)n Simple_repeat Simple_repeat 2 34 0 1933 138 0 0 chr10 112513959 112514255 -33075033 - AluSx SINE Alu -16 296 1 1452 171 58 4 chr10 112514271 112514545 -33074743 - AluJb SINE Alu -13 299 11 1241 160 19 56 chr10 112514619 112514887 -33074401 - AluJo SINE Alu -54 258 1 2062 109 3 0 chr10 112514892 112515185 -33074103 - AluSx SINE Alu -18 294 1 793 132 0 16 chr10 112515380 112515501 -33073787 + AluJb SINE Alu 1 119 -193 25 0 0 0 chr10 112515501 112515526 -33073762 + AT_rich Low_complexity Low_complexity 1 25 0 1863 142 10 3 chr10 112515962 112516265 -33073023 + AluSx SINE Alu 3 307 -5 2120 75 41 0 chr10 112516267 112516560 -33072728 + AluY SINE Alu 1 305 -6 2075 95 18 0 chr10 112516562 112516845 -33072443 + AluSq SINE Alu 1 288 -25 2163 91 3 3 chr10 112516995 112517281 -33072007 + AluSx SINE Alu 1 286 -26 2067 104 17 3 chr10 112517291 112517589 -33071699 + AluSc SINE Alu 2 303 -6 851 247 94 8 chr10 112517654 112517889 -33071399 - MIR SINE MIR -7 255 1 2001 102 7 11 chr10 112518360 112518668 -33070620 + AluY SINE Alu 1 307 0 406 144 56 33 chr10 112518680 112518770 -33070518 - L1MC5 LINE L1 -44 7917 7826 338 215 78 84 chr10 112518816 112519007 -33070281 - L1MC5 LINE L1 -298 7663 7474 2174 102 6 10 chr10 112519016 112519330 -33069958 - AluSp SINE Alu 0 313 1 2169 62 41 14 chr10 112519925 112520217 -33069071 - AluY SINE Alu -9 302 3 1379 191 7 43 chr10 112520294 112520598 -33068690 - AluJo SINE Alu -19 293 1 1793 129 16 16 chr10 112520864 112521175 -33068113 - AluSq SINE Alu -2 311 1 698 300 60 17 chr10 112521777 112522010 -33067278 - MIR SINE MIR 0 262 20 1143 131 86 50 chr10 112522114 112522257 -33067031 - MER30 DNA MER1_type 0 230 75 1954 145 0 0 chr10 112522257 112522560 -33066728 - AluSx SINE Alu -9 303 1 1143 131 86 50 chr10 112522560 112522638 -33066650 - MER30 DNA MER1_type -155 75 1 2269 81 3 0 chr10 112522853 112523163 -33066125 - AluSx SINE Alu -1 311 1 2166 98 3 0 chr10 112523436 112523731 -33065557 - AluY SINE Alu -15 296 1 1856 140 17 0 chr10 112523736 112524036 -33065252 - AluSx SINE Alu -7 305 1 830 216 39 25 chr10 112524197 112524401 -33064887 + AluJb SINE Alu 97 303 -9 2046 125 0 0 chr10 112524401 112524698 -33064590 + AluSx SINE Alu 1 297 -15 741 219 14 7 chr10 112524708 112524854 -33064434 + AluJo SINE Alu 2 148 -164 1482 195 11 11 chr10 112524858 112525145 -33064143 + AluJb SINE Alu 18 304 -8 565 223 145 47 chr10 112525366 112525559 -33063729 - L1ME2 LINE L1 -18 6146 5935 734 104 0 0 chr10 112525592 112525688 -33063600 + AluS SINE Alu 2 97 -215 1507 65 0 35 chr10 112525790 112525991 -33063297 - AluSq SINE Alu -119 194 1 490 285 21 98 chr10 112526531 112526668 -33062620 - MIR SINE MIR -19 243 97 2018 134 0 0 chr10 112526668 112526966 -33062322 + AluSq SINE Alu 2 299 -14 490 285 21 98 chr10 112526966 112527032 -33062256 - MIR SINE MIR -165 97 27 2070 93 10 20 chr10 112527032 112527332 -33061956 + AluSx SINE Alu 1 297 -15 2108 96 3 30 chr10 112527332 112527465 -33061823 + AluSp SINE Alu 2 137 -176 2077 92 44 0 chr10 112527465 112527760 -33061528 + AluSc SINE Alu 1 308 -1 2108 96 3 30 chr10 112527760 112527929 -33061359 + AluSp SINE Alu 137 296 -17 490 285 21 98 chr10 112527929 112527969 -33061319 - MIR SINE MIR -233 29 27 637 277 100 13 chr10 112527982 112528213 -33061075 - MIR SINE MIR -1 261 11 808 201 0 17 chr10 112528808 112528982 -33060306 - AluJb SINE Alu -11 301 131 200 274 145 43 chr10 112528986 112529103 -33060185 + L2 LINE L2 3179 3307 -6 307 234 0 0 chr10 112529354 112529418 -33059870 + L2 LINE L2 3246 3309 -4 1767 122 56 11 chr10 112529454 112529741 -33059547 - AluSx SINE Alu -8 304 5 2203 98 3 0 chr10 112530172 112530469 -33058819 - AluSx SINE Alu -14 298 1 926 181 16 16 chr10 112530623 112530816 -33058472 - L1ME2 LINE L1 -271 5907 5715 1774 143 3 17 chr10 112530816 112531109 -33058179 - AluSq SINE Alu -24 289 1 735 211 50 106 chr10 112531140 112531356 -33057932 - L1MC5 LINE L1 -389 7572 7378 2136 77 7 7 chr10 112531356 112531643 -33057645 - AluY SINE Alu -24 287 1 735 211 50 106 chr10 112531643 112531748 -33057540 - L1MC5 LINE L1 -583 7378 7269 1513 206 14 0 chr10 112531831 112532127 -33057161 - AluJo SINE Alu -12 300 1 1866 127 7 23 chr10 112532384 112532691 -33056597 + AluSx SINE Alu 1 302 -10 203 278 0 19 chr10 112532842 112532896 -33056392 + L3 LINE CR1 418 470 -1107 1046 142 137 0 chr10 112533786 112534012 -33055276 - L1MA9 LINE L1 0 6312 6056 609 305 30 47 chr10 112534311 112534544 -33054744 - MIR SINE MIR -14 248 20 1360 171 66 52 chr10 112534599 112534904 -33054384 - AluJo SINE Alu -1 311 3 2006 81 7 7 chr10 112534919 112535192 -33054096 - AluSc SINE Alu -15 294 22 1731 42 0 5 chr10 112535292 112535536 -33053752 + AluY SINE Alu 69 311 0 1499 105 64 30 chr10 112535590 112535856 -33053432 + AluJo SINE Alu 12 286 -26 309 162 0 0 chr10 112536191 112536259 -33053029 + CT-rich Low_complexity Low_complexity 2 69 0 206 213 0 21 chr10 112536374 112536421 -33052867 + G-rich Low_complexity Low_complexity 6 51 0 1891 91 52 3 chr10 112537067 112537353 -33051935 - AluSq SINE Alu -13 300 1 201 158 53 0 chr10 112537353 112537391 -33051897 - L2 LINE L2 -11 3302 3263 2229 83 0 0 chr10 112537474 112537796 -33051492 + AluSg SINE Alu 3 310 0 2163 94 3 7 chr10 112537914 112538212 -33051076 + AluSp SINE Alu 1 297 -16 2141 99 0 0 chr10 112538224 112538538 -33050750 + AluSg SINE Alu 1 314 0 268 94 0 38 chr10 112538570 112538623 -33050665 + Alu SINE Alu 251 301 -1 273 190 0 0 chr10 112538935 112538993 -33050295 + FLAM_A SINE Alu 74 131 -2 2441 173 28 31 chr10 112538997 112539146 -33050142 + L1MB3 LINE L1 5307 5455 -729 1709 158 34 0 chr10 112539146 112539437 -33049851 - AluSx SINE Alu -11 301 1 2441 173 28 31 chr10 112539437 112539797 -33049491 + L1MB3 LINE L1 5455 5814 -370 2224 95 7 13 chr10 112539827 112540133 -33049155 + AluSx SINE Alu 1 304 -8 479 110 0 0 chr10 112540143 112540216 -33049072 + L1P4 LINE L1 5369 5441 -724 954 121 0 104 chr10 112540220 112540341 -33048947 + AluSx SINE Alu 16 116 -196 2091 99 3 0 chr10 112540341 112540645 -33048643 + AluSp SINE Alu 1 305 0 954 121 0 104 chr10 112540645 112540695 -33048593 + AluSx SINE Alu 116 170 -142 413 141 0 0 chr10 112540695 112540759 -33048529 + AluS SINE Alu 231 294 -18 1599 153 7 11 chr10 112540759 112541046 -33048242 + L1MB3 LINE L1 5894 6179 -4 2026 119 7 3 chr10 112541070 112541372 -33047916 + AluSq SINE Alu 1 303 -10 1645 147 10 29 chr10 112541696 112542008 -33047280 + AluJo SINE Alu 6 311 -1 250 231 0 46 chr10 112542036 112542101 -33047187 + AluSg/x SINE Alu 118 179 -121 2178 112 0 0 chr10 112542911 112543214 -33046074 - AluSq SINE Alu -10 303 1 674 176 0 0 chr10 112543214 112543322 -33045966 - AluSg/x SINE Alu -14 298 191 938 90 15 0 chr10 112543322 112543456 -33045832 - AluJb SINE Alu -165 147 12 355 283 162 7 chr10 112544347 112544559 -33044729 + L1MC4a LINE L1 4883 5132 -1014 427 257 126 56 chr10 112544564 112544706 -33044582 + L1MC4a LINE L1 5401 5532 -589 2324 46 3 0 chr10 112544706 112545023 -33044265 + AluY SINE Alu 1 318 0 427 257 126 56 chr10 112545023 112545298 -33043990 + L1MC4a LINE L1 5532 5782 -339 803 180 132 0 chr10 112545355 112545522 -33043766 + MER5A DNA MER1_type 1 189 0 21 0 0 0 chr10 112546146 112546167 -33043121 + GC_rich Low_complexity Low_complexity 1 21 0 2175 84 0 0 chr10 112546717 112547004 -33042284 - AluSx SINE Alu -25 287 1 1839 132 7 0 chr10 112548853 112549140 -33040148 - AluSx SINE Alu -23 289 1 1055 442 53 0 chr10 112550144 112550429 -33038859 + AluSx SINE Alu 2 301 -1 444 106 0 0 chr10 112550504 112550570 -33038718 - AluSq SINE Alu -8 301 236 1200 143 0 0 chr10 112550571 112550746 -33038542 - AluSq SINE Alu -138 175 1 598 200 0 83 chr10 112550760 112550905 -33038383 - FLAM_A SINE Alu 0 133 1 1562 176 4 11 chr10 112551106 112551385 -33037903 - AluSx SINE Alu -33 279 3 198 365 19 28 chr10 112551388 112551495 -33037793 - MIR SINE MIR -155 107 2 1544 171 9 37 chr10 112552134 112552455 -33036833 - AluJo SINE Alu 0 312 1 228 291 58 19 chr10 112552515 112552618 -33036670 - MIR3 SINE MIR -5 203 97 26 0 0 0 chr10 112552628 112552654 -33036634 + AT_rich Low_complexity Low_complexity 1 26 0 2155 102 7 0 chr10 112552661 112552965 -33036323 - AluSg SINE Alu -4 306 1 694 262 61 68 chr10 112553076 112553138 -33036150 + MER102a DNA MER1_type 45 106 -1311 2171 77 0 17 chr10 112553138 112553438 -33035850 - AluY SINE Alu -16 295 1 694 262 61 68 chr10 112553438 112553654 -33035634 + MER102a DNA MER1_type 106 321 -9 2318 102 0 0 chr10 112553822 112554135 -33035153 - AluSq SINE Alu 0 313 1 1394 178 75 4 chr10 112554137 112554418 -33034870 - AluJo SINE Alu -11 301 1 983 174 0 0 chr10 112554750 112554922 -33034366 - AluSx SINE Alu -5 307 136 2198 119 0 0 chr10 112555161 112555472 -33033816 - AluSx SINE Alu 0 312 2 24 53 0 0 chr10 112556591 112556629 -33032659 + AT_rich Low_complexity Low_complexity 1 38 0 322 212 0 15 chr10 112556647 112556713 -33032575 + Charlie5 DNA MER1_type 6 70 -2542 * 737 142 54 0 chr10 112556711 112556859 -33032429 + Charlie5 DNA MER1_type 2469 2624 0 461 248 14 7 chr10 112556918 112557063 -33032225 - HAL1 LINE L1 -123 2384 2239 25 0 0 0 chr10 112557063 112557088 -33032200 + AT_rich Low_complexity Low_complexity 1 25 0 953 81 8 0 chr10 112557088 112557211 -33032077 + AluY SINE Alu 29 152 -159 980 108 8 0 chr10 112557311 112557440 -33031848 - AluSx SINE Alu -179 134 5 406 293 72 19 chr10 112557445 112557653 -33031635 - HAL1 LINE L1 -1733 774 556 2077 110 4 0 chr10 112558558 112558830 -33030458 + AluSx SINE Alu 1 273 -39 863 178 75 75 chr10 112559120 112559172 -33030116 + AluJo SINE Alu 87 138 -174 1630 126 8 4 chr10 112559172 112559411 -33029877 + AluSx SINE Alu 1 240 -72 863 178 75 75 chr10 112559411 112559571 -33029717 + AluJo SINE Alu 137 299 -13 2256 101 3 10 chr10 112561063 112561369 -33027919 - AluSq SINE Alu -9 304 1 1002 245 95 50 chr10 112561436 112561897 -33027391 - MLT1J LTR MaLR -14 497 16 22 35 0 0 chr10 112561967 112561996 -33027292 + AT_rich Low_complexity Low_complexity 1 29 0 2365 84 3 0 chr10 112562541 112562837 -33026451 - AluY SINE Alu -14 297 1 2147 119 0 20 chr10 112563027 112563330 -33025958 - AluSx SINE Alu -15 297 1 30 0 0 0 chr10 112563339 112563369 -33025919 + AT_rich Low_complexity Low_complexity 1 30 0 2085 125 3 0 chr10 112563371 112563658 -33025630 - AluSx SINE Alu -24 288 1 2229 127 0 0 chr10 112563668 112563976 -33025312 - AluSx SINE Alu -4 308 1 246 253 66 22 chr10 112564431 112564522 -33024766 + MIR3 SINE MIR 105 199 -9 1955 128 3 24 chr10 112564624 112564914 -33024374 - AluSx SINE Alu -9 303 20 350 64 0 0 chr10 112564914 112564961 -33024327 - AluSp/q SINE Alu -73 230 184 32 43 0 0 chr10 112564994 112565040 -33024248 + AT_rich Low_complexity Low_complexity 1 46 0 1919 142 7 23 chr10 112565047 112565357 -33023931 - AluJb SINE Alu -7 305 1 199 371 67 0 chr10 112565389 112565516 -33023772 + MIR SINE MIR 38 171 -77 2333 103 3 0 chr10 112565987 112566287 -33023001 - AluSp SINE Alu -12 301 1 26 0 0 0 chr10 112566364 112566390 -33022898 + AT_rich Low_complexity Low_complexity 1 26 0 2156 128 3 3 chr10 112566757 112567063 -33022225 + AluSq SINE Alu 1 306 -7 24 53 0 0 chr10 112567617 112567655 -33021633 + AT_rich Low_complexity Low_complexity 1 38 0 2550 89 0 0 chr10 112568051 112568364 -33020924 + AluSq SINE Alu 1 313 0 2069 107 17 14 chr10 112568565 112568855 -33020433 + AluSx SINE Alu 1 291 -21 686 475 89 11 chr10 112568961 112569073 -33020215 + AluJo SINE Alu 1 103 -199 1536 79 0 5 chr10 112569073 112569263 -33020025 - AluSg/x SINE Alu -13 299 111 686 475 89 11 chr10 112569263 112569430 -33019858 + AluJo SINE Alu 103 302 0 201 291 0 18 chr10 112569482 112569537 -33019751 + MER91 DNA MER1_type 137 190 0 2300 99 0 0 chr10 112569620 112569939 -33019349 - AluSp SINE Alu 0 320 2 2145 125 0 0 chr10 112569963 112570251 -33019037 - AluSp SINE Alu -24 289 2 224 342 58 71 chr10 112570251 112570275 -33019013 - L2 LINE L2 -277 3036 3013 2390 91 3 0 chr10 112570275 112570572 -33018716 - AluSq SINE Alu -13 300 3 224 342 58 71 chr10 112570572 112570702 -33018586 - L2 LINE L2 -300 3013 2884 1922 148 13 38 chr10 112570702 112571020 -33018268 + AluJo SINE Alu 1 310 -2 183 283 48 72 chr10 112571446 112571612 -33017676 - MER5A DNA MER1_type -5 184 23 * 400 292 7 45 chr10 112571471 112571625 -33017663 + MER5B DNA MER1_type 31 178 0 2245 117 7 0 chr10 112572109 112572409 -33016879 + AluSx SINE Alu 1 302 -10 1793 134 17 34 chr10 112575149 112575447 -33013841 + AluJo SINE Alu 1 293 -19 495 221 74 78 chr10 112575685 112575924 -33013364 - MIR SINE MIR -1 261 23 2334 112 0 6 chr10 112575924 112576238 -33013050 - AluSx SINE Alu 0 312 1 2102 138 0 0 chr10 112576887 112577176 -33012112 + AluSx SINE Alu 8 296 -16 2125 130 0 0 chr10 112577197 112577490 -33011798 + AluJb SINE Alu 1 293 -19 1260 156 0 56 chr10 112577502 112577533 -33011755 + L1MB5 LINE L1 5957 5988 -186 2206 105 3 0 chr10 112577533 112577829 -33011459 + AluSq SINE Alu 1 297 -16 1260 156 0 56 chr10 112577829 112578028 -33011260 + L1MB5 LINE L1 5988 6174 0 2392 93 0 0 chr10 112578046 112578348 -33010940 + AluSc SINE Alu 1 302 -7 2356 109 0 6 chr10 112578515 112578828 -33010460 + AluSq SINE Alu 1 311 -2 399 41 0 0 chr10 112578895 112578944 -33010344 + (CA)n Simple_repeat Simple_repeat 2 50 0 23 0 0 0 chr10 112578991 112579014 -33010274 + AT_rich Low_complexity Low_complexity 1 23 0 2206 112 7 0 chr10 112579074 112579368 -33009920 + AluSg SINE Alu 1 296 -14 344 250 88 27 chr10 112579472 112579620 -33009668 - L1ME3A LINE L1 -289 5881 5725 1675 176 0 4 chr10 112579873 112580154 -33009134 - AluJb SINE Alu 0 305 26 268 219 0 11 chr10 112580154 112580212 -33009076 - AluJ/monomer SINE Alu -255 47 2 1693 136 44 31 chr10 112580516 112580675 -33008613 - AluJb SINE Alu -3 299 133 1824 165 3 20 chr10 112580675 112580840 -33008448 - AluSx SINE Alu -14 298 139 2126 110 0 23 chr10 112580840 112581139 -33008149 - AluY SINE Alu -19 292 1 1824 165 3 20 chr10 112581139 112581276 -33008012 - AluSx SINE Alu -173 139 1 1693 136 44 31 chr10 112581276 112581410 -33007878 - AluJb SINE Alu -169 133 2 954 202 27 6 chr10 112582078 112582261 -33007027 - MER58A DNA MER1_type 0 224 38 569 314 18 0 chr10 112584018 112584187 -33005101 - MIR SINE MIR -27 235 64 701 101 0 93 chr10 112585623 112585675 -33003613 - L1MA5 LINE L1 -4 6296 6241 2107 145 3 3 chr10 112585675 112585985 -33003303 - AluSx SINE Alu -2 310 1 701 101 0 93 chr10 112585985 112586061 -33003227 - L1MA5 LINE L1 -59 6241 6180 606 163 81 0 chr10 112587816 112587939 -33001349 - MER5A DNA MER1_type -56 133 1 1908 137 7 26 chr10 112588304 112588610 -33000678 - AluSx SINE Alu -12 300 1 2302 107 0 0 chr10 112589378 112589686 -32999602 - AluSg SINE Alu -2 308 1 778 214 77 20 chr10 112690741 112690863 -32898425 + MER3 DNA MER1_type 2 141 -68 2212 88 17 0 chr10 112690863 112691157 -32898131 - AluSp SINE Alu -14 299 1 778 214 77 20 chr10 112691157 112691230 -32898058 + MER3 DNA MER1_type 141 208 -1 1011 247 9 9 chr10 112691946 112692169 -32897119 + MIR SINE MIR 8 230 -32 2176 108 0 7 chr10 112692209 112692515 -32896773 + AluSx SINE Alu 1 304 -8 618 239 71 44 chr10 112693465 112693588 -32895700 + MIR SINE MIR 31 164 -98 1193 240 90 6 chr10 112693588 112693900 -32895388 + MER46C DNA MER2_type 1 338 0 618 239 71 44 chr10 112693900 112694002 -32895286 + MIR SINE MIR 164 262 0 386 247 44 16 chr10 112694532 112694661 -32894627 + MIR SINE MIR 38 168 -62 220 167 37 0 chr10 112695535 112695589 -32893699 + T-rich Low_complexity Low_complexity 5 60 0 201 39 0 0 chr10 112696111 112696137 -32893151 + (TAA)n Simple_repeat Simple_repeat 2 27 0 23 0 0 0 chr10 112696141 112696164 -32893124 + AT_rich Low_complexity Low_complexity 1 23 0 264 250 44 0 chr10 112696684 112696752 -32892536 - L2 LINE L2 -2 3311 3241 1645 159 17 43 chr10 112696958 112697260 -32892028 + AluJb SINE Alu 9 302 -10 2303 88 3 0 chr10 112697662 112697958 -32891330 + AluSx SINE Alu 2 298 -14 1745 153 30 13 chr10 112698025 112698325 -32890963 + AluJb SINE Alu 2 306 -6 1305 133 56 93 chr10 112700147 112700248 -32889040 + AluJb SINE Alu 25 128 -184 2085 103 0 29 chr10 112700248 112700389 -32888899 + AluSx SINE Alu 1 145 -167 2035 117 3 3 chr10 112700389 112700680 -32888608 + AluSc SINE Alu 1 291 -18 2085 103 0 29 chr10 112700680 112700850 -32888438 + AluSx SINE Alu 145 303 -9 2171 90 3 17 chr10 112700850 112701174 -32888114 + AluY SINE Alu 1 311 0 1305 133 56 93 chr10 112701174 112701341 -32887947 + AluJb SINE Alu 126 284 -28 429 0 49 0 chr10 112701343 112701404 -32887884 + (TAAAA)n Simple_repeat Simple_repeat 3 66 0 2073 107 0 0 chr10 112701404 112701814 -32887474 + AluSx SINE Alu 2 411 0 2358 56 6 46 chr10 112701971 112702294 -32886994 - AluY SINE Alu -1 310 1 484 156 56 11 chr10 112702723 112702813 -32886475 - Alu SINE Alu -6 304 211 23 0 0 0 chr10 112702983 112703006 -32886282 + AT_rich Low_complexity Low_complexity 1 23 0 2182 108 0 3 chr10 112703081 112703377 -32885911 + AluSq SINE Alu 1 295 -18 2245 110 0 0 chr10 112703509 112703817 -32885471 + AluSq SINE Alu 1 308 -5 200 188 14 72 chr10 112704036 112704105 -32885183 + L2 LINE L2 2915 2979 -334 204 316 76 13 chr10 112704346 112704425 -32884863 + L2 LINE L2 3146 3229 -43 996 289 55 50 chr10 112704441 112704599 -32884689 - L2 LINE L2 0 3313 3157 2271 93 0 7 chr10 112704599 112704901 -32884387 + AluSx SINE Alu 1 300 -12 2274 84 3 7 chr10 112704911 112705207 -32884081 + AluSx SINE Alu 1 295 -17 2306 62 7 23 chr10 112705207 112705514 -32883774 + AluSq SINE Alu 1 302 -11 996 289 55 50 chr10 112705514 112705893 -32883395 - L2 LINE L2 -163 3150 2757 219 242 275 0 chr10 112707548 112707639 -32881649 + MER91A DNA MER1_type 8 123 -73 521 307 14 0 chr10 112708100 112708240 -32881048 + MIR SINE MIR 56 197 -65 477 302 78 24 chr10 112708518 112708723 -32880565 + MIR SINE MIR 9 224 -38 195 271 129 0 chr10 112709257 112709342 -32879946 - MIR SINE MIR -48 214 119 2345 120 0 0 chr10 112709342 112709651 -32879637 + AluSx SINE Alu 1 309 -3 261 175 0 0 chr10 112709758 112709798 -32879490 - Alu SINE Alu -268 40 1 791 171 16 52 chr10 112709856 112710049 -32879239 + MER53 DNA DNA 4 189 0 2458 49 10 33 chr10 112710110 112710416 -32878872 + AluY SINE Alu 1 299 -12 1066 174 0 0 chr10 112710416 112710577 -32878711 + AluJb SINE Alu 134 294 -18 2241 102 7 0 chr10 112711034 112711328 -32877960 - AluSq SINE Alu -4 309 14 217 336 19 19 chr10 112711385 112711489 -32877799 + MIR SINE MIR 47 150 -112 203 244 0 0 chr10 112712091 112712132 -32877156 + GA-rich Low_complexity Low_complexity 1 41 0 183 80 0 0 chr10 112714482 112714507 -32874781 + (T)n Simple_repeat Simple_repeat 1 25 0 191 387 28 0 chr10 112717255 112717361 -32871927 + L2 LINE L2 3160 3268 -4 * 283 303 56 0 chr10 112717341 112717430 -32871858 - MIR SINE MIR -56 206 113 2316 74 28 3 chr10 112717916 112718199 -32871089 - AluY SINE Alu -21 290 1 2442 78 3 13 chr10 112719061 112719370 -32869918 + AluSq SINE Alu 1 306 -7 2420 91 0 3 chr10 112722097 112722404 -32866884 - AluY SINE Alu -5 306 1 2313 105 0 13 chr10 112722583 112722898 -32866390 - AluSx SINE Alu -1 311 1 2320 113 0 3 chr10 112722921 112723221 -32866067 + AluSq SINE Alu 1 299 -14 2387 104 0 0 chr10 112724023 112724321 -32864967 - AluSx SINE Alu -12 300 3 2295 119 3 3 chr10 112724402 112724714 -32864574 - AluSx SINE Alu 0 312 1 409 247 111 62 chr10 112724714 112724812 -32864476 - MER5A DNA MER1_type -3 186 75 2422 64 6 19 chr10 112724812 112725123 -32864165 - AluSg1 SINE Alu -1 308 2 409 247 111 62 chr10 112725123 112725186 -32864102 - MER5A DNA MER1_type -114 75 17 1608 164 7 61 chr10 112725186 112725367 -32863921 - AluJo SINE Alu -19 293 134 1949 134 50 0 chr10 112725367 112725644 -32863644 + AluSg SINE Alu 1 291 -19 1608 164 7 61 chr10 112725644 112725772 -32863516 - AluJo SINE Alu -178 134 1 243 88 0 0 chr10 112725869 112725903 -32863385 + (TG)n Simple_repeat Simple_repeat 1 34 0 1579 109 9 9 chr10 112726445 112726666 -32862622 - AluY SINE Alu -11 300 80 237 333 35 0 chr10 112827875 112827962 -32761326 - MER94 DNA DNA -1 133 44 744 267 63 0 chr10 112828063 112828284 -32761004 - Charlie8 DNA MER1_type -2145 272 38 2121 100 0 0 chr10 112829797 112830078 -32759210 - AluY SINE Alu -8 303 23 393 309 122 17 chr10 112830107 112830288 -32759000 + MIR SINE MIR 5 204 -58 295 289 0 70 chr10 112830487 112830615 -32758673 + MIR3 SINE MIR 72 190 -18 2071 100 31 3 chr10 112830633 112830923 -32758365 + AluSx SINE Alu 1 298 -14 1754 150 0 54 chr10 112830931 112831244 -32758044 + AluJb SINE Alu 1 296 -16 233 294 184 25 chr10 112831546 112831709 -32757579 + MIR SINE MIR 20 208 -54 2022 139 7 0 chr10 112832145 112832454 -32756834 + AluSq SINE Alu 1 311 -2 216 0 0 0 chr10 112833528 112833552 -32755736 + (GTTTG)n Simple_repeat Simple_repeat 3 26 0 1110 133 0 0 chr10 112833553 112833718 -32755570 - MLT1B LTR MaLR -52 338 174 4134 163 16 39 chr10 112833753 112834103 -32755185 - L1MB2 LINE L1 -6 6165 5809 1932 158 0 7 chr10 112834103 112834413 -32754875 - AluJb SINE Alu -3 309 2 4134 163 16 39 chr10 112834413 112834916 -32754372 - L1MB2 LINE L1 -362 5809 5331 2017 105 0 4 chr10 112834916 112835192 -32754096 - AluSq SINE Alu -9 304 30 2015 136 3 7 chr10 112835430 112835731 -32753557 + AluSx SINE Alu 1 300 -12 197 269 237 11 chr10 112837213 112837306 -32751982 + L2 LINE L2 3192 3305 -8 2119 93 3 10 chr10 112837334 112837635 -32751653 + AluSx SINE Alu 1 299 -13 405 294 166 68 chr10 112839164 112839549 -32749739 - L1ME4a LINE L1 -20 6101 5679 234 94 245 0 chr10 112839552 112839605 -32749683 - AluSc SINE Alu 0 299 234 1792 122 12 0 chr10 112839680 112839934 -32749354 - AluSx SINE Alu -55 257 1 259 311 38 0 chr10 112840014 112840120 -32749168 - L1M2 LINE L1 -728 5572 5463 561 119 0 0 chr10 112840137 112840221 -32749067 - AluS SINE Alu 0 309 226 1815 127 0 4 chr10 112840221 112840489 -32748799 - AluSx SINE Alu -11 301 35 1593 181 24 17 chr10 112841272 112841565 -32747723 - AluJo SINE Alu -17 295 1 2253 64 0 3 chr10 112841600 112841909 -32747379 - AluY SINE Alu 0 308 1 375 281 11 7 chr10 112841912 112842056 -32747232 - MIR3 SINE MIR -66 142 11 1595 173 6 26 chr10 112843176 112843488 -32745800 + AluJo SINE Alu 1 306 -6 259 324 0 28 chr10 112844508 112844616 -32744672 + GA-rich Low_complexity Low_complexity 5 109 0 1933 149 10 0 chr10 112845375 112845676 -32743612 - AluSx SINE Alu -8 304 1 195 42 0 0 chr10 112845818 112845842 -32743446 + (GGAGA)n Simple_repeat Simple_repeat 4 27 0 217 260 0 0 chr10 112849133 112849183 -32740105 - MIR SINE MIR -68 140 91 302 307 47 60 chr10 112849220 112849370 -32739918 + MIR SINE MIR 58 205 -57 23 0 0 0 chr10 112850932 112850955 -32738333 + AT_rich Low_complexity Low_complexity 1 23 0 2263 102 0 0 chr10 112852256 112852560 -32736728 - AluSx SINE Alu 0 312 9 1791 100 4 4 chr10 112852619 112852869 -32736419 + AluSq SINE Alu 61 310 -3 186 356 59 25 chr10 112854428 112854546 -32734742 - MIR SINE MIR -131 131 10 232 163 0 94 chr10 112854845 112854940 -32734348 + MIR SINE MIR 102 183 -62 190 290 22 20 chr10 112855008 112855125 -32734163 - MIR SINE MIR -73 135 51 378 127 0 0 chr10 112855728 112855799 -32733489 + (GGA)n Simple_repeat Simple_repeat 3 73 0 366 231 88 0 chr10 112857045 112857136 -32732152 + L3 LINE CR1 1304 1402 -175 35 24 0 0 chr10 112857478 112857520 -32731768 + AT_rich Low_complexity Low_complexity 1 42 0 843 145 8 0 chr10 112857551 112857682 -32731606 - FLAM_C SINE Alu -1 132 1 320 278 143 8 chr10 112857682 112857815 -32731473 - MIR SINE MIR -98 164 14 406 284 173 24 chr10 112858257 112858465 -32730823 - MIR SINE MIR -1 261 23 292 164 33 0 chr10 112859977 112860038 -32729250 + MIR SINE MIR 91 153 -109 869 263 97 0 chr10 112860122 112860350 -32728938 + MIR SINE MIR 13 262 0 212 179 45 75 chr10 112860381 112860448 -32728840 + L2 LINE L2 3025 3089 -183 426 252 163 57 chr10 112860715 112860897 -32728391 - MER102b DNA MER1_type -1095 333 109 1624 180 3 37 chr10 112860897 112861220 -32728068 - AluJb SINE Alu 0 312 1 426 252 163 57 chr10 112861220 112861319 -32727969 - MER102b DNA MER1_type -1319 109 22 200 94 0 31 chr10 112863187 112863219 -32726069 + (GGGA)n Simple_repeat Simple_repeat 1 31 0 264 319 18 0 chr10 112863414 112863527 -32725761 + (TGG)n Simple_repeat Simple_repeat 2 116 0 632 301 39 0 chr10 112864167 112864370 -32724918 - MIR SINE MIR -6 256 46 858 205 7 13 chr10 112864920 112865104 -32724184 + FRAM SINE Alu 1 47 0 838 101 0 47 chr10 112865156 112865285 -32724003 + FLAM_C SINE Alu 5 127 -6 969 162 42 0 chr10 112865325 112865492 -32723796 - AluJb SINE Alu -19 293 120 1893 100 73 14 chr10 112865593 112865882 -32723406 + AluSg SINE Alu 1 306 -4 902 106 0 0 chr10 112865902 112866025 -32723263 + AluSq/x SINE Alu 12 134 -178 2304 103 0 0 chr10 112866025 112866337 -32722951 + AluSx SINE Alu 1 312 0 638 176 111 12 chr10 112866624 112866840 -32722448 + MLT1A1 LTR MaLR 83 379 -11 2181 87 26 35 chr10 112867011 112867321 -32721967 + AluSx SINE Alu 1 307 -5 715 279 53 4 chr10 112867324 112867550 -32721738 + MIR SINE MIR 6 242 -20 2091 175 90 24 chr10 112867628 112867920 -32721368 - MLT1D LTR MaLR 0 505 234 180 0 0 0 chr10 112867920 112867940 -32721348 + (TC)n Simple_repeat Simple_repeat 2 21 0 2038 107 10 0 chr10 112867940 112868231 -32721057 - AluSx SINE Alu -18 294 1 2091 175 90 24 chr10 112868231 112868406 -32720882 - MLT1D LTR MaLR -270 235 6 238 390 16 8 chr10 112868789 112868912 -32720376 + L3 LINE CR1 941 1064 -513 2091 132 0 0 chr10 112869138 112869442 -32719846 - AluSx SINE Alu -8 304 1 761 304 126 12 chr10 112869487 112869829 -32719459 + LTR16C LTR ERVL 96 476 -15 1697 153 3 45 chr10 112869847 112870160 -32719128 - AluJo SINE Alu -12 300 1 403 236 64 64 chr10 112870188 112870345 -32718943 + MLT1J1 LTR MaLR 266 422 -24 2081 130 0 3 chr10 112870345 112870653 -32718635 - AluSx SINE Alu -5 307 1 646 319 164 21 chr10 112870735 112871154 -32718134 + L2 LINE L2 2521 2879 -434 3132 144 70 57 chr10 112871154 112871384 -32717904 + MER39B LTR ERV1 1 227 -426 2208 77 7 3 chr10 112871384 112871671 -32717617 + AluSx SINE Alu 12 299 -13 3132 144 70 57 chr10 112871671 112872085 -32717203 + MER39B LTR ERV1 227 653 0 646 319 164 21 chr10 112872085 112872361 -32716927 + L2 LINE L2 2879 3313 0 2039 140 3 6 chr10 112872733 112873047 -32716241 - AluSq SINE Alu 0 313 1 760 167 16 0 chr10 112873048 112873174 -32716114 - AluJo/FLAM SINE Alu -173 129 2 206 248 281 33 chr10 112874162 112874283 -32715005 + L2 LINE L2 3163 3313 0 2263 89 7 0 chr10 112874317 112874621 -32714667 - AluSc SINE Alu -3 306 1 260 283 42 42 chr10 112875040 112875160 -32714128 + L2 LINE L2 3175 3294 -19 2216 103 3 0 chr10 112875755 112876056 -32713232 - AluSq SINE Alu -11 302 1 2159 90 21 3 chr10 112876620 112876910 -32712378 + AluSx SINE Alu 3 297 -15 351 276 191 7 chr10 112877010 112877162 -32712126 + MER5A DNA MER1_type 4 183 -6 263 250 9 0 chr10 112878269 112878385 -32710903 + (TCCA)n Simple_repeat Simple_repeat 2 118 0 360 318 17 6 chr10 112878414 112878567 -32710721 + (TCCA)n Simple_repeat Simple_repeat 1 158 -17 2227 104 3 0 chr10 112878567 112878876 -32710412 - AluSx SINE Alu -2 310 1 360 318 17 6 chr10 112878876 112878895 -32710393 + (TCCA)n Simple_repeat Simple_repeat 158 175 0 291 313 76 61 chr10 112878948 112879146 -32710142 - L2 LINE L2 -47 3225 3025 227 302 35 35 chr10 112879478 112879564 -32709724 - MIR SINE MIR -157 105 20 288 257 53 35 chr10 112879580 112879693 -32709595 - MIR3 SINE MIR -9 199 85 644 245 117 0 chr10 112880034 112880222 -32709066 + MIR SINE MIR 53 262 0 604 289 40 6 chr10 112881046 112881219 -32708069 + LTR16C LTR ERVL 149 327 -164 2031 108 20 10 chr10 112881689 112881994 -32707294 - AluSx SINE Alu -4 308 1 3155 155 18 16 chr10 112882001 112882563 -32706725 + MER39B LTR ERV1 89 651 -2 186 43 0 0 chr10 112883685 112883708 -32705580 + (CAA)n Simple_repeat Simple_repeat 2 24 0 244 286 118 8 chr10 112883755 112883874 -32705414 - L2 LINE L2 -175 3097 2966 2038 123 3 3 chr10 112884252 112884553 -32704735 - AluSx SINE Alu -11 301 1 1813 95 0 98 chr10 112885613 112885918 -32703370 + AluSx SINE Alu 1 275 -37 30 69 0 0 chr10 112885918 112885976 -32703312 + AT_rich Low_complexity Low_complexity 1 58 0 204 234 32 11 chr10 112886247 112886341 -32702947 + (TATG)n Simple_repeat Simple_repeat 4 99 0 690 314 65 44 chr10 112886676 112887578 -32701710 + L1MC4a LINE L1 4900 5360 -786 2076 99 0 24 chr10 112887580 112887717 -32701571 + AluSx SINE Alu 1 140 -172 2556 39 0 3 chr10 112887717 112888022 -32701266 + AluY SINE Alu 1 304 -7 2076 99 0 24 chr10 112888022 112888176 -32701112 + AluSx SINE Alu 140 285 -27 23 33 0 0 chr10 112888179 112888209 -32701079 + AT_rich Low_complexity Low_complexity 1 30 0 921 174 29 12 chr10 112888297 112888469 -32700819 - AluJb SINE Alu -17 295 121 1840 154 13 3 chr10 112889268 112889573 -32699715 - AluJb SINE Alu -4 308 1 2141 74 3 51 chr10 112889581 112889893 -32699395 - AluSp SINE Alu -16 297 1 638 242 33 115 chr10 112890691 112890935 -32698353 + MIR SINE MIR 28 251 -11 2185 113 0 3 chr10 112891053 112891362 -32697926 - AluSx SINE Alu -4 308 1 288 214 0 179 chr10 112892185 112892302 -32696986 + MER5A DNA MER1_type 93 188 -1 488 172 21 48 chr10 112892360 112892505 -32696783 + Charlie7 DNA MER1_type 2469 2609 -3 213 280 0 0 chr10 112892831 112892881 -32696407 - L2 LINE L2 0 3313 3264 1528 162 35 35 chr10 112893002 112893292 -32695996 + AluJo SINE Alu 5 294 -8 1976 125 4 0 chr10 112893295 112893610 -32695678 + AluSx SINE Alu 1 316 0 306 345 6 23 chr10 112893932 112894106 -32695182 + GA-rich Low_complexity Low_complexity 2 172 0 1787 128 30 43 chr10 112894116 112894251 -32695037 + AluSx SINE Alu 1 136 -176 2416 80 0 0 chr10 112894251 112894562 -32694726 + AluY SINE Alu 1 311 0 1787 128 30 43 chr10 112894562 112894731 -32694557 + AluSx SINE Alu 136 301 -11 706 259 12 0 chr10 112895427 112895589 -32693699 + MER96 DNA MER1_type? 11 174 -1 633 107 0 0 chr10 112895831 112895915 -32693373 + AluS SINE Alu 2 85 -228 585 318 103 19 chr10 112896584 112896905 -32692383 - L2 LINE L2 -3 3310 2963 28 79 0 0 chr10 112897888 112897951 -32691337 + GC_rich Low_complexity Low_complexity 1 63 0 23 54 0 0 chr10 112898131 112898168 -32691120 + GC_rich Low_complexity Low_complexity 1 37 0 194 114 0 29 chr10 112899632 112899667 -32689621 - MIR SINE MIR -112 150 117 822 257 111 57 chr10 112899889 112899947 -32689341 + L1ME4a LINE L1 5561 5614 -507 2112 116 0 7 chr10 112899947 112900250 -32689038 + AluSx SINE Alu 1 301 -11 822 257 111 57 chr10 112900250 112900721 -32688567 + L1ME4a LINE L1 5614 6119 -2 2506 30 3 0 chr10 112902350 112902647 -32686641 - AluY SINE Alu -13 298 1 2996 178 25 0 chr10 112902652 112903180 -32686108 - L1MB5 LINE L1 0 6174 5634 519 119 10 20 chr10 112903498 112903599 -32685689 + (TTCC)n Simple_repeat Simple_repeat 1 100 0 1423 155 105 14 chr10 112903600 112903877 -32685411 - AluJo SINE Alu 0 302 1 697 281 68 24 chr10 112904348 112904597 -32684691 - MIR SINE MIR -1 261 2 520 291 0 19 chr10 112904846 112905004 -32684284 + MER5A DNA MER1_type 1 155 -34 228 379 50 8 chr10 112905157 112905397 -32683891 - L2 LINE L2 -373 2941 2692 329 310 22 91 chr10 112905620 112905740 -32683548 - MIR SINE MIR 0 262 135 2111 98 0 3 chr10 112905740 112906055 -32683233 - AluSq SINE Alu 0 314 1 813 183 0 0 chr10 112906056 112906187 -32683101 - FLAM_A SINE Alu -2 131 1 329 310 22 91 chr10 112906187 112906295 -32682993 - MIR SINE MIR -126 136 47 1766 196 33 50 chr10 112906378 112906775 -32682513 - MLT1B LTR MaLR 0 390 1 218 342 59 33 chr10 112907684 112907836 -32681452 - L2 LINE L2 -1 3271 3116 1114 136 6 0 chr10 112907910 112908079 -32681209 - AluJb SINE Alu -10 302 133 405 0 0 0 chr10 112908081 112908126 -32681162 + (TTTA)n Simple_repeat Simple_repeat 4 48 0 2022 112 3 0 chr10 112908127 112908412 -32680876 - AluSg SINE Alu -24 286 1 1816 135 16 13 chr10 112908413 112908725 -32680563 - L1MC3 LINE L1 -266 7519 7207 312 231 44 22 chr10 112908725 112908816 -32680472 - MLT1F1 LTR MaLR -420 147 55 248 248 147 54 chr10 112908905 112909034 -32680254 - L2 LINE L2 -144 3128 2988 251 184 14 177 chr10 112909087 112909168 -32680120 - MER20B DNA MER1_type -657 126 76 1631 165 3 48 chr10 112909168 112909342 -32679946 - AluJb SINE Alu -11 301 146 1953 128 3 13 chr10 112909342 112909646 -32679642 - AluSx SINE Alu -11 301 1 1631 165 3 48 chr10 112909646 112909786 -32679502 - AluJb SINE Alu -166 146 1 251 184 14 177 chr10 112909786 112909845 -32679443 - MER20B DNA MER1_type -707 76 9 233 308 99 0 chr10 112910493 112910584 -32678704 - L2 LINE L2 -4 3268 3169 188 67 33 0 chr10 112910639 112910669 -32678619 + (TCC)n Simple_repeat Simple_repeat 3 33 0 2204 101 0 3 chr10 112910686 112910982 -32678306 - AluSx SINE Alu -17 295 1 306 359 24 12 chr10 112911142 112911309 -32677979 - MIR3 SINE MIR -17 191 23 273 271 191 20 chr10 112911410 112911609 -32677679 - L2 LINE L2 -558 2756 2524 319 144 14 0 chr10 112913028 112913084 -32676204 + AluSx SINE Alu 1 47 -255 1981 91 0 22 chr10 112913110 112913384 -32675904 + AluSx SINE Alu 43 310 -2 1295 167 53 0 chr10 112913391 112913636 -32675652 - Tigger3(Golem) DNA MER2_type 0 3029 2772 803 184 0 0 chr10 112913639 112913775 -32675513 - Tigger3(Golem) DNA MER2_type -2888 141 6 435 266 141 52 chr10 112915756 112916004 -32673284 + L2 LINE L2 3000 3269 -3 198 0 0 0 chr10 112916153 112916175 -32673113 + (TTCA)n Simple_repeat Simple_repeat 3 24 0 223 289 217 0 chr10 112916181 112916264 -32673024 - L2 LINE L2 -13 3300 3200 293 220 74 59 chr10 112916500 112916634 -32672654 + MIR SINE MIR 11 146 -63 829 163 0 15 chr10 112916636 112916771 -32672517 + AluJb SINE Alu 1 133 -179 395 281 64 12 chr10 112917681 112917850 -32671438 - MIR3 SINE MIR -21 187 6 226 216 0 20 chr10 112917998 112918049 -32671239 + G-rich Low_complexity Low_complexity 2 51 0 1895 84 54 15 chr10 112918214 112918475 -32670813 - AluSc SINE Alu -2 307 37 240 311 50 54 chr10 112918766 112918915 -32670373 + MIR SINE MIR 1 155 -53 2427 97 3 0 chr10 112919068 112919378 -32669910 + AluSx SINE Alu 1 311 -1 530 308 81 66 chr10 112919841 112920067 -32669221 - L2 LINE L2 -562 2752 2531 2195 131 3 3 chr10 112920067 112920379 -32668909 + AluJb SINE Alu 1 312 0 530 308 81 66 chr10 112920379 112920756 -32668532 - L2 LINE L2 -783 2531 2140 208 241 121 0 chr10 112920825 112920883 -32668405 - MER5A DNA MER1_type 0 189 125 261 208 104 26 chr10 112920886 112920963 -32668325 + L1M4 LINE L1 4662 4744 -1402 184 173 58 0 chr10 112920963 112921015 -32668273 + CT-rich Low_complexity Low_complexity 2 56 0 514 315 72 75 chr10 112921143 112921766 -32667522 + L2 LINE L2 2657 3268 -4 451 318 177 5 chr10 112921839 112922059 -32667229 - MIR SINE MIR -3 259 2 243 0 0 0 chr10 112922920 112922947 -32666341 + (T)n Simple_repeat Simple_repeat 1 27 0 309 347 40 17 chr10 112925260 112925436 -32663852 - MIR SINE MIR -58 204 25 471 223 0 0 chr10 112925774 112925868 -32663420 + MIR SINE MIR 107 200 -62 22 35 0 0 chr10 112926402 112926431 -32662857 + AT_rich Low_complexity Low_complexity 1 29 0 201 274 27 41 chr10 112928663 112928736 -32660552 - MIR SINE MIR -103 105 34 210 267 0 0 chr10 112928846 112928891 -32660397 + CT-rich Low_complexity Low_complexity 4 48 0 386 324 118 15 chr10 112929164 112929368 -32659920 + MIR SINE MIR 1 225 -37 822 238 22 0 chr10 112929407 112929592 -32659696 + MER5A DNA MER1_type 1 189 0 32 0 0 0 chr10 112931455 112931487 -32657801 + AT_rich Low_complexity Low_complexity 1 32 0 24 0 0 0 chr10 112932773 112932797 -32656491 + AT_rich Low_complexity Low_complexity 1 24 0 206 170 85 21 chr10 112933729 112933776 -32655512 - MIR SINE MIR -82 180 131 815 321 44 32 chr10 112933962 112934426 -32654862 + L2 LINE L2 2625 3095 -218 296 274 60 0 chr10 112934474 112934558 -32654730 + L2 LINE L2 2979 3067 -205 252 324 14 0 chr10 112934895 112934969 -32654319 - L2 LINE L2 -213 3059 2985 532 278 42 31 chr10 112935094 112935285 -32654003 + L2 LINE L2 3118 3310 -3 * 665 353 91 31 chr10 112935284 112935966 -32653322 - L2 LINE L2 -371 2943 2221 1676 144 14 0 chr10 112935998 112936276 -32653012 - L1PA16 LINE L1 -3 6163 5882 297 287 16 57 chr10 112936317 112936439 -32652849 + MIR SINE MIR 29 145 -117 208 256 0 0 chr10 112937220 112937263 -32652025 + (TATATG)n Simple_repeat Simple_repeat 6 48 0 402 311 93 20 chr10 112937337 112937488 -32651800 - MIR3 SINE MIR -27 181 20 2496 263 154 46 chr10 112938547 112939091 -32650197 + L2 LINE L2 79 563 -2751 1984 171 5 56 chr10 112939091 112939500 -32649788 - MLT1B LTR MaLR -2 388 1 2496 263 154 46 chr10 112939500 112940147 -32649141 + L2 LINE L2 563 1399 -1915 1722 187 11 32 chr10 112940148 112940496 -32648792 + MLT1A1 LTR MaLR 3 343 -22 592 119 0 0 chr10 112941098 112941182 -32648106 + AluS SINE Alu 1 84 -228 4122 56 4 0 chr10 112941182 112941702 -32647586 + L1PA7 LINE L1 5631 6152 -2 2846 42 3 8 chr10 112941892 112942247 -32647041 + L1PA4 LINE L1 5795 6147 -8 887 171 39 25 chr10 112942559 112942861 -32646427 - THE1C LTR MaLR 0 375 1 194 373 34 25 chr10 112943396 112943514 -32645774 + MIR SINE MIR 29 147 -61 1979 118 10 28 chr10 112943599 112943918 -32645370 + AluSx SINE Alu 1 314 0 22 0 0 0 chr10 112944855 112944877 -32644411 + AT_rich Low_complexity Low_complexity 1 22 0 833 329 111 0 chr10 112945385 112945780 -32643508 - L2 LINE L2 -12 3301 2863 387 259 121 0 chr10 112946417 112946533 -32642755 + MIR SINE MIR 21 150 -112 3303 110 30 0 chr10 112946624 112947122 -32642166 + LTR10D LTR ERV1 1 513 0 596 301 131 12 chr10 112948187 112948522 -32640766 - LTR16C LTR ERVL -45 446 72 2079 139 65 3 chr10 112948815 112949167 -32640121 + LTR57 LTR ERVL 1 374 -37 468 0 0 0 chr10 112949168 112949220 -32640068 + (TA)n Simple_repeat Simple_repeat 1 52 0 289 370 59 0 chr10 112949326 112949461 -32639827 + MIR SINE MIR 119 261 -1 774 219 30 50 chr10 112949582 112949783 -32639505 - MER20 DNA MER1_type 0 219 23 194 234 0 39 chr10 112949855 112949932 -32639356 + GA-rich Low_complexity Low_complexity 1 74 0 617 113 27 13 chr10 112950305 112950455 -32638833 + Charlie5 DNA MER1_type 2373 2524 -88 959 264 103 31 chr10 112950605 112950995 -32638293 - MER77 LTR ERV1 -7 598 181 481 354 95 0 chr10 112951407 112951650 -32637638 + HAL1 LINE L1 20 285 -2222 1508 256 120 29 chr10 112951660 112952433 -32636855 + HAL1 LINE L1 604 1460 -1047 207 0 0 0 chr10 112952433 112952456 -32636832 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1508 256 120 29 chr10 112952456 112952515 -32636773 + HAL1 LINE L1 1460 1512 -995 381 203 39 129 chr10 112952757 112952989 -32636299 + HAL1 LINE L1 2214 2424 -83 29 60 0 0 chr10 112954207 112954257 -32635031 + AT_rich Low_complexity Low_complexity 1 50 0 2173 82 14 0 chr10 112954401 112954692 -32634596 - AluY SINE Alu -16 295 1 244 314 58 12 chr10 112954921 112955007 -32634281 - L3 LINE CR1 -1239 338 249 329 315 30 42 chr10 112956127 112956292 -32632996 - MER5B DNA MER1_type -11 167 5 39 0 0 0 chr10 112956356 112956395 -32632893 + AT_rich Low_complexity Low_complexity 1 39 0 356 302 144 32 chr10 112956802 112957080 -32632208 - L2 LINE L2 0 3313 3005 344 267 49 31 chr10 112957171 112957485 -32631803 - HAL1 LINE L1 -1444 1063 549 1566 133 27 55 chr10 112957506 112957836 -32631452 - THE1B LTR MaLR -43 321 1 12005 89 2 1 chr10 112957836 112959413 -32629875 - THE1B-int LTR MaLR -1 1579 1 1963 123 24 54 chr10 112959415 112959788 -32629500 - THE1B LTR MaLR -2 362 1 412 260 148 31 chr10 112959816 112960039 -32629249 - HAL1 LINE L1 -2134 373 125 948 252 9 37 chr10 112960140 112960465 -32628823 + MLT1A2 LTR MaLR 55 370 -4 2308 192 13 7 chr10 112960900 112961358 -32627930 + LOR1b LTR ERV1 1 461 0 1913 197 6 6 chr10 112962333 112962698 -32626590 + MLT1A1 LTR MaLR 1 365 0 1497 302 32 13 chr10 112962758 112963383 -32625905 - L1MC4a LINE L1 -1908 5900 5264 187 176 0 0 chr10 112963615 112963649 -32625639 - L2 LINE L2 0 3313 3280 2181 198 30 0 chr10 112963658 112964053 -32625235 + MER47B DNA MER2_type 2 408 -10 2736 278 156 42 chr10 112964070 112965740 -32623548 - L2 LINE L2 -48 3265 1395 227 208 19 0 chr10 112965743 112965796 -32623492 - MLT1A1 LTR MaLR -2 363 310 441 0 0 0 chr10 112965902 112965951 -32623337 + (TG)n Simple_repeat Simple_repeat 2 50 0 1532 192 6 44 chr10 112965955 112966273 -32623015 + MLT2B3 LTR ERVL 235 540 -14 1600 182 37 10 chr10 112966364 112966660 -32622628 + AluJo SINE Alu 1 304 -8 569 261 190 0 chr10 112966661 112966856 -32622432 + MIR SINE MIR 21 252 -10 288 223 27 9 chr10 112969219 112969331 -32619957 + (TA)n Simple_repeat Simple_repeat 1 114 0 229 378 96 46 chr10 112969639 112969680 -32619608 - L2 LINE L2 -669 2645 2607 872 230 5 0 chr10 112969680 112969867 -32619421 + MER5A DNA MER1_type 1 188 -1 229 378 96 46 chr10 112969867 112970367 -32618921 - L2 LINE L2 -707 2607 2077 1783 185 5 50 chr10 112970737 112971120 -32618168 + MER99 DNA DNA 212 577 -251 23 0 0 0 chr10 112971619 112971642 -32617646 + AT_rich Low_complexity Low_complexity 1 23 0 670 237 43 63 chr10 112972907 112973114 -32616174 + MIR SINE MIR 2 204 -58 311 287 153 13 chr10 112973310 112973460 -32615828 - MIR SINE MIR -81 181 11 1228 160 26 26 chr10 112973548 112973779 -32615509 + MLT2B3 LTR ERVL 1 231 -323 291 28 0 0 chr10 112973791 112973827 -32615461 + (TG)n Simple_repeat Simple_repeat 1 36 0 364 230 72 60 chr10 112974134 112974369 -32614919 + MER97c DNA MER1_type? 852 1089 -1 225 65 0 0 chr10 112974810 112974841 -32614447 + (TTG)n Simple_repeat Simple_repeat 2 32 0 * 323 167 15 0 chr10 112974839 112974905 -32614383 + CT-rich Low_complexity Low_complexity 3 69 0 567 267 164 52 chr10 112975116 112975348 -32613940 - Charlie8 DNA MER1_type -2156 261 4 242 290 124 28 chr10 112975349 112975494 -32613794 - L3b LINE CR1 -135 1448 1290 1718 179 14 3 chr10 112977112 112977409 -32611879 + AluJb SINE Alu 1 300 -12 379 354 36 10 chr10 112977675 112977867 -32611421 + MIR SINE MIR 66 262 0 21 0 0 0 chr10 112978863 112978884 -32610404 + AT_rich Low_complexity Low_complexity 1 21 0 35 24 0 0 chr10 112979677 112979719 -32609569 + AT_rich Low_complexity Low_complexity 1 42 0 467 211 11 11 chr10 112980197 112980287 -32609001 + MER5A DNA MER1_type 24 113 -76 1024 196 23 35 chr10 112980731 112980991 -32608297 + MER97a DNA MER1_type? 510 766 -128 1971 78 7 0 chr10 112980991 112981261 -32608027 - L1PA4 LINE L1 -16 6139 5868 354 260 70 63 chr10 112981452 112981677 -32607611 + L1ME LINE L1 5264 5493 -669 204 40 0 0 chr10 112981677 112981702 -32607586 + (GA)n Simple_repeat Simple_repeat 2 26 0 354 260 70 63 chr10 112981702 112981776 -32607512 + L1ME LINE L1 5493 5565 -597 270 315 45 9 chr10 112982319 112982430 -32606858 + LTR67 LTR ERVL 435 549 -8 244 293 66 9 chr10 112982434 112982540 -32606748 + L1ME LINE L1 5615 5726 -436 776 346 118 31 chr10 112982743 112983536 -32605752 + L2 LINE L2 2150 3019 -253 696 243 99 45 chr10 112983615 112984059 -32605229 - L1MC5 LINE L1 -232 7729 7262 337 218 14 82 chr10 112984150 112984297 -32604991 - L1MC4 LINE L1 -699 7262 7126 333 301 19 0 chr10 112984273 112984376 -32604912 - L1MC5 LINE L1 -861 7100 6996 * 1387 233 44 34 chr10 112984377 112984784 -32604504 - LTR52 LTR ERVL -5 416 6 434 309 8 0 chr10 112984835 112984961 -32604327 - LTR52-int LTR ERVL -2427 3258 3132 583 250 20 14 chr10 112984969 112985117 -32604171 - LTR52-int LTR ERVL -1993 1563 1415 1427 248 86 50 chr10 112985179 112985622 -32603666 - MLT1E LTR MaLR -125 468 10 1036 297 31 28 chr10 112985679 112986039 -32603249 - L1MEc LINE L1 -6001 395 35 28 29 0 0 chr10 112986169 112986204 -32603084 + AT_rich Low_complexity Low_complexity 1 35 0 615 261 70 4 chr10 112986343 112986573 -32602715 - L1ME4a LINE L1 -240 5881 5637 569 306 65 0 chr10 112987002 112987188 -32602100 + MIR SINE MIR 41 238 -24 1530 250 46 23 chr10 112987565 112987997 -32601291 + MER70A LTR ERVL 4 445 -27 7917 211 18 11 chr10 112988447 112990365 -32598923 - L1 LINE L1 -1222 4924 2994 392 190 0 10 chr10 112990472 112990572 -32598716 - L1ME4a LINE L1 -2343 5442 5344 2175 252 4 30 chr10 112992003 112992531 -32596757 + L1PA13 LINE L1 217 730 -6057 5615 116 40 5 chr10 112992531 112993582 -32595706 + L1PA15 LINE L1 5088 6165 0 409 315 33 33 chr10 112994734 112994918 -32594370 + MER20B DNA MER1_type 2 185 -598 23 54 0 0 chr10 112995173 112995210 -32594078 + AT_rich Low_complexity Low_complexity 1 37 0 863 233 42 23 chr10 112995363 112995578 -32593710 - MER20 DNA MER1_type 0 219 1 2769 169 49 16 chr10 112998108 112998600 -32590688 + MLT2B2 LTR ERVL 3 510 -5 438 237 0 11 chr10 112998600 112998693 -32590595 - MER44D DNA MER2_type 0 705 614 210 197 0 66 chr10 112998693 112998754 -32590534 + (TATATG)n Simple_repeat Simple_repeat 5 61 0 1597 186 14 0 chr10 112998829 112999125 -32590163 + MER47A DNA MER2_type 65 364 -2 236 108 0 0 chr10 112999129 112999166 -32590122 - MER44D DNA MER2_type -90 515 479 * 2565 159 15 34 chr10 112999163 112999628 -32589660 - MER44D DNA MER2_type -94 511 1 2068 128 7 3 chr10 112999719 113000023 -32589265 + AluSx SINE Alu 1 305 -7 449 250 92 74 chr10 113001323 113001759 -32587529 + L1MCa LINE L1 2230 2679 -3747 201 261 31 43 chr10 113002020 113002181 -32587107 + A-rich Low_complexity Low_complexity 2 160 0 2099 198 94 31 chr10 113002334 113002581 -32586707 - L1MC3 LINE L1 -1288 6497 6267 2425 66 3 28 chr10 113002581 113002900 -32586388 - AluY SINE Alu 0 311 1 2099 198 94 31 chr10 113002900 113003246 -32586042 - L1MC3 LINE L1 -1518 6267 5861 1818 174 25 16 chr10 113003246 113003609 -32585679 - MER47A DNA MER2_type 0 366 1 2099 198 94 31 chr10 113003609 113003629 -32585659 - L1MC3 LINE L1 -1924 5861 5844 5560 130 21 33 chr10 113003678 113004066 -32585222 - L1PB2 LINE L1 -7 6144 5753 2267 39 95 3 chr10 113004066 113004350 -32584938 - AluY SINE Alu -1 310 1 5560 130 21 33 chr10 113004350 113005222 -32584066 - L1PB2 LINE L1 -398 5753 4906 507 325 57 34 chr10 113005359 113005747 -32583541 - L1MC3 LINE L1 -504 5658 5262 236 325 0 32 chr10 113006043 113006166 -32583122 + LTR67 LTR ERVL 439 557 0 213 261 29 14 chr10 113006989 113007058 -32582230 - MER5A DNA MER1_type -80 109 40 258 339 48 0 chr10 113007353 113007477 -32581811 - L2 LINE L2 -5 3308 3179 272 317 240 0 chr10 113007577 113007681 -32581607 - L2 LINE L2 -1 3271 3143 26878 39 9 0 chr10 113007721 113011148 -32578140 + L1P1 LINE L1 2024 5480 -675 6934 123 9 11 chr10 113011248 113012389 -32576899 - L1P LINE L1 -798 5348 4211 2728 89 18 0 chr10 113012389 113012767 -32576521 + L1PA10 LINE L1 5777 6163 -5 292 164 0 0 chr10 113012782 113012837 -32576451 + L1MA3 LINE L1 6251 6305 0 25 0 0 0 chr10 113013480 113013505 -32575783 + AT_rich Low_complexity Low_complexity 1 25 0 26 0 0 0 chr10 113013706 113013732 -32575556 + AT_rich Low_complexity Low_complexity 1 26 0 3818 133 14 0 chr10 113014051 113014631 -32574657 + MER39B LTR ERV1 66 653 0 2408 60 0 0 chr10 113015281 113015580 -32573708 - AluY SINE Alu -8 303 5 213 273 13 26 chr10 113015656 113015733 -32573555 + MIR SINE MIR 70 145 -63 246 272 78 48 chr10 113015827 113015930 -32573358 + L2 LINE L2 3208 3313 0 335 200 138 0 chr10 113016330 113016410 -32572878 - MIR SINE MIR -14 248 158 292 334 41 13 chr10 113017115 113017259 -32572029 + MIR SINE MIR 54 199 -61 * 589 284 56 56 chr10 113017236 113017486 -32571802 - MIR SINE MIR -8 254 5 240 111 0 0 chr10 113017682 113017718 -32571570 + (ATG)n Simple_repeat Simple_repeat 2 37 0 541 280 38 47 chr10 113019206 113019417 -32569871 - MER58C DNA MER1_type -6 209 1 440 308 89 9 chr10 113019418 113019632 -32569656 + MIR SINE MIR 32 262 0 340 267 50 30 chr10 113020110 113020211 -32569077 - L2 LINE L2 -8 3264 3162 366 306 75 17 chr10 113020505 113020678 -32568610 - MIR3 SINE MIR -6 202 20 259 337 119 25 chr10 113020688 113021041 -32568247 - L2 LINE L2 -487 2827 2442 881 296 173 15 chr10 113021404 113021937 -32567351 + L2 LINE L2 1796 2412 -902 205 342 86 17 chr10 113021937 113022240 -32567048 + L2 LINE L2 2767 3082 -190 217 222 81 20 chr10 113022662 113022762 -32566526 - MIR SINE MIR -51 157 52 1942 140 0 10 chr10 113022843 113023157 -32566131 - AluJb SINE Alu -1 311 1 295 336 43 43 chr10 113023666 113023877 -32565411 - MIR SINE MIR 0 262 52 407 316 34 53 chr10 113024091 113024300 -32564988 + MIR SINE MIR 57 261 -1 3747 191 41 37 chr10 113024328 113025092 -32564196 + L1M3f LINE L1 4 770 -4558 961 237 105 11 chr10 113025111 113025567 -32563721 + MER114 LTR ERV 90 588 -60 383 157 11 92 chr10 113025691 113025876 -32563412 + CT-rich Low_complexity Low_complexity 1 170 0 1868 155 0 0 chr10 113025876 113026166 -32563122 - AluJb SINE Alu -12 300 11 234 327 19 19 chr10 113026226 113026333 -32562955 - MIR SINE MIR -3 259 153 231 204 0 0 chr10 113027169 113027218 -32562070 + CT-rich Low_complexity Low_complexity 4 52 0 860 238 108 46 chr10 113027232 113027555 -32561733 - L2 LINE L2 -5 3308 2966 2124 126 0 7 chr10 113027817 113028126 -32561162 + AluSx SINE Alu 6 312 0 1581 197 7 7 chr10 113028623 113028933 -32560355 - AluJb SINE Alu -2 310 1 2514 119 58 23 chr10 113029056 113029491 -32559797 - LTR7 LTR ERV1 0 450 1 3030 79 9 12 chr10 113029491 113029923 -32559365 - HERVH LTR ERV1 0 7713 7283 5473 98 3 1 chr10 113029927 113030663 -32558625 - HERVH LTR ERV1 -2693 5020 4284 2335 132 62 23 chr10 113030681 113031114 -32558174 - LTR7 LTR ERV1 0 450 1 2041 94 43 23 chr10 113031176 113031475 -32557813 + AluSp SINE Alu 2 306 -7 10372 141 26 36 chr10 113031841 113032022 -32557266 - L1MA5 LINE L1 -2 7319 7138 1858 160 0 3 chr10 113032022 113032335 -32556953 + AluJo SINE Alu 1 312 0 10372 141 26 36 chr10 113032335 113034193 -32555095 - L1MA5 LINE L1 -183 7138 5263 1953 139 0 0 chr10 113034193 113034496 -32554792 - AluSx SINE Alu -2 310 8 10372 141 26 36 chr10 113034496 113035351 -32553937 - L1MA5 LINE L1 -2058 5263 4450 1978 106 7 0 chr10 113035351 113035653 -32553635 - AluSg SINE Alu 0 310 7 10372 141 26 36 chr10 113035653 113035791 -32553497 - L1MA5 LINE L1 -2871 4450 4312 2921 125 96 29 chr10 113035791 113036130 -32553158 - MER41B LTR ERV1 -88 547 161 2208 115 0 6 chr10 113036130 113036444 -32552844 - AluSx SINE Alu 0 312 1 2921 125 96 29 chr10 113036444 113036617 -32552671 - MER41B LTR ERV1 -474 161 1 2194 120 16 41 chr10 113036617 113036787 -32552501 - MER41B-int LTR ERV1 0 5946 5773 2206 107 0 16 chr10 113036787 113036923 -32552365 + AluSx SINE Alu 1 138 -174 2200 109 6 0 chr10 113036923 113037234 -32552054 + AluSq SINE Alu 1 313 0 2206 107 0 16 chr10 113037234 113037414 -32551874 + AluSx SINE Alu 138 312 0 2194 120 16 41 chr10 113037414 113037610 -32551678 - MER41B-int LTR ERV1 -173 5773 5589 5805 117 32 13 chr10 113037705 113038633 -32550655 - MER41A-int LTR ERV1 -361 7395 4639 560 149 23 11 chr10 113038628 113038715 -32550573 - MER41A-int LTR ERV1 -5858 88 1 * 1067 134 0 0 chr10 113038715 113038872 -32550416 - MER41A LTR ERV1 0 554 398 11887 174 33 63 chr10 113038872 113039405 -32549883 - L1MA5 LINE L1 -2822 4345 3798 1839 123 53 0 chr10 113039405 113039689 -32549599 - AluSx SINE Alu -13 299 1 11887 174 33 63 chr10 113039689 113039792 -32549496 - L1MA5 LINE L1 -3369 3798 3694 2091 115 3 0 chr10 113039792 113040079 -32549209 + AluSg SINE Alu 3 290 -20 11887 174 33 63 chr10 113040079 113040257 -32549031 - L1MA5 LINE L1 -3473 3694 3512 818 160 8 0 chr10 113040257 113040388 -32548900 - FLAM_C SINE Alu -1 132 1 1500 170 58 11 chr10 113040393 113040669 -32548619 - AluJo SINE Alu -23 289 1 11887 174 33 63 chr10 113040669 113041770 -32547518 - L1MA5 LINE L1 -3659 3508 2376 2235 95 0 3 chr10 113041770 113042076 -32547212 - AluY SINE Alu -6 305 1 11887 174 33 63 chr10 113042076 113042209 -32547079 - L1MA5 LINE L1 -4791 2376 2241 2170 105 0 10 chr10 113042209 113042386 -32546902 - AluSp SINE Alu -3 310 136 2412 57 0 0 chr10 113042386 113042685 -32546603 - AluY SINE Alu -12 299 1 2170 105 0 10 chr10 113042685 113042820 -32546468 - AluSp SINE Alu -177 136 1 11887 174 33 63 chr10 113042820 113045111 -32544177 - L1MA5 LINE L1 -4926 2241 137 2055 94 0 0 chr10 113045111 113045387 -32543901 + AluSq SINE Alu 1 276 -37 11887 174 33 63 chr10 113045387 113045497 -32543791 - L1MA5 LINE L1 -7030 137 25 3675 108 28 39 chr10 113045594 113046212 -32543076 - L1MB3 LINE L1 -7 6176 5566 1971 113 21 0 chr10 113046261 113046543 -32542745 - AluJb SINE Alu -24 288 1 723 168 31 37 chr10 113046562 113046723 -32542565 - L1MA10 LINE L1 -3 6331 6172 595 218 19 87 chr10 113046724 113046938 -32542350 - L1ME2 LINE L1 -176 5990 5821 1018 124 0 7 chr10 113046938 113047115 -32542173 - AluSg/x SINE Alu 0 306 131 2062 117 0 0 chr10 113047138 113047428 -32541860 + AluSx SINE Alu 1 290 -22 2193 107 0 0 chr10 113047484 113047793 -32541495 - AluSx SINE Alu 0 312 4 1865 166 3 0 chr10 113047793 113048095 -32541193 - AluJb SINE Alu -9 303 1 911 168 51 9 chr10 113048097 113048311 -32540977 - L1ME2 LINE L1 -749 5397 5175 933 261 42 82 chr10 113048579 113049008 -32540280 + MLT1J LTR MaLR 100 511 0 2094 116 0 25 chr10 113049120 113049439 -32539849 - AluSx SINE Alu -1 311 1 23 33 0 0 chr10 113049599 113049629 -32539659 + AT_rich Low_complexity Low_complexity 1 30 0 189 306 0 0 chr10 113049927 113049976 -32539312 - L2 LINE L2 -553 2761 2713 1284 257 49 29 chr10 113050054 113050100 -32539188 - LTR16B LTR ERVL 0 464 420 243 61 0 0 chr10 113050100 113050133 -32539155 + (CATA)n Simple_repeat Simple_repeat 4 36 0 1284 257 49 29 chr10 113050133 113050533 -32538755 - LTR16B LTR ERVL -44 420 9 628 268 148 40 chr10 113050624 113050997 -32538291 - MLT1L LTR MaLR -52 563 151 363 229 137 78 chr10 113051016 113051106 -32538182 - MER5B DNA MER1_type -16 162 58 1753 167 7 10 chr10 113051106 113051412 -32537876 - AluJo SINE Alu -7 305 1 363 229 137 78 chr10 113051412 113051474 -32537814 - MER5B DNA MER1_type -120 58 1 443 248 32 24 chr10 113051524 113051649 -32537639 + MIR SINE MIR 69 194 -68 202 233 23 0 chr10 113052341 113052384 -32536904 + CT-rich Low_complexity Low_complexity 2 45 0 445 182 34 0 chr10 113053361 113053449 -32535839 - MIR3 SINE MIR -50 158 68 814 220 6 6 chr10 113054858 113055031 -32534257 - AluJo SINE Alu -17 295 123 266 238 105 37 chr10 113055130 113055300 -32533988 + MIR SINE MIR 22 147 -61 289 346 9 9 chr10 113055372 113055479 -32533809 + MIR SINE MIR 28 134 -128 259 209 45 15 chr10 113055731 113055798 -32533490 + MIR SINE MIR 23 91 -171 582 278 190 15 chr10 113055882 113056087 -32533201 - MIR SINE MIR -21 241 1 273 233 35 47 chr10 113057050 113057136 -32532152 + MIR SINE MIR 176 260 -2 2218 91 3 0 chr10 113057175 113057472 -32531816 - AluSq SINE Alu -15 298 1 283 281 31 10 chr10 113058709 113058805 -32530483 + MIR SINE MIR 48 145 -63 538 253 182 5 chr10 113059608 113059806 -32529482 + MIR SINE MIR 22 254 -8 207 244 0 0 chr10 113060037 113060082 -32529206 + L2 LINE L2 3228 3272 0 2328 85 0 3 chr10 113060147 113060453 -32528835 - AluSx SINE Alu -7 305 1 543 299 140 41 chr10 113061015 113061599 -32527689 + L2 LINE L2 2633 3271 -1 529 250 61 14 chr10 113062003 113062151 -32527137 + MIR SINE MIR 108 262 0 339 333 0 0 chr10 113062805 113062910 -32526378 + MIR SINE MIR 51 155 -107 509 162 92 184 chr10 113063364 113063592 -32525696 + MIR SINE MIR 20 226 -36 331 282 57 24 chr10 113063628 113063752 -32525536 + L2 LINE L2 3142 3269 -3 247 255 33 33 chr10 113063943 113064096 -32525192 + (CGGG)n Simple_repeat Simple_repeat 4 156 0 333 300 56 50 chr10 113065840 113065995 -32523293 + MIR SINE MIR 22 180 -82 891 130 8 8 chr10 113065995 113066126 -32523162 + FLAM_C SINE Alu 1 131 -2 333 300 56 50 chr10 113066126 113066150 -32523138 + MIR SINE MIR 180 202 -60 2016 107 4 4 chr10 113066721 113067027 -32522261 - AluSg SINE Alu 0 306 1 405 0 0 0 chr10 113067353 113067398 -32521890 + (TG)n Simple_repeat Simple_repeat 2 46 0 217 281 0 16 chr10 113067611 113067675 -32521613 + CT-rich Low_complexity Low_complexity 1 63 0 319 254 35 84 chr10 113067797 113067939 -32521349 - MIR3 SINE MIR -16 192 58 213 343 65 9 chr10 113068142 113068250 -32521038 + L2 LINE L2 3155 3268 -4 693 269 55 0 chr10 113068428 113068629 -32520659 + MIR SINE MIR 50 261 -1 669 211 0 20 chr10 113068680 113068933 -32520355 + (CA)n Simple_repeat Simple_repeat 1 247 0 595 171 19 0 chr10 113069619 113069724 -32519564 + MIR SINE MIR 48 154 -108 1312 207 120 89 chr10 113069725 113070108 -32519180 - MLT1F LTR MaLR 0 542 137 2243 103 0 7 chr10 113070108 113070408 -32518880 - AluSq SINE Alu -10 303 6 1312 207 120 89 chr10 113070408 113070541 -32518747 - MLT1F LTR MaLR -405 137 10 530 300 64 67 chr10 113070871 113070954 -32518334 - L2 LINE L2 -4 3268 3186 2222 108 0 0 chr10 113070954 113071260 -32518028 + AluSg SINE Alu 3 308 -2 530 300 64 67 chr10 113071260 113071322 -32517966 - L2 LINE L2 -86 3186 3125 794 254 57 0 chr10 113071322 113071515 -32517773 - MER105 DNA DNA 0 204 1 530 300 64 67 chr10 113071515 113071711 -32517577 - L2 LINE L2 -147 3125 2927 638 290 5 16 chr10 113072098 113072309 -32516979 - MIR SINE MIR -56 206 3 201 171 0 0 chr10 113072503 113072538 -32516750 + (TAA)n Simple_repeat Simple_repeat 2 36 0 472 230 182 18 chr10 113072549 113072714 -32516574 - MIR SINE MIR -54 208 17 461 281 14 36 chr10 113073415 113073554 -32515734 + MIR3 SINE MIR 11 146 -62 1806 150 20 16 chr10 113074496 113074802 -32514486 - AluJb SINE Alu -5 307 1 488 193 17 17 chr10 113074811 113074930 -32514358 - L1ME1 LINE L1 -2 6164 6046 1291 153 4 31 chr10 113074930 113075159 -32514129 - AluJo SINE Alu -3 309 87 1967 216 48 10 chr10 113075159 113075678 -32513610 - L1ME1 LINE L1 -108 6058 5520 2259 112 0 3 chr10 113075820 113076133 -32513155 - AluSx SINE Alu 0 312 1 1740 140 10 49 chr10 113076241 113076548 -32512740 - AluJo SINE Alu -17 295 1 526 320 103 5 chr10 113076555 113076758 -32512530 + MIR SINE MIR 9 231 -31 623 209 16 0 chr10 113077381 113077510 -32511778 - L1MA10 LINE L1 -1 6333 6203 339 311 38 15 chr10 113077522 113077654 -32511634 - L1ME1 LINE L1 -92 6074 5940 2281 104 0 0 chr10 113077654 113077962 -32511326 - AluSx SINE Alu -2 310 3 415 264 14 27 chr10 113078081 113078229 -32511059 - L1MD2 LINE L1 -265 5901 5756 260 96 19 58 chr10 113079180 113079232 -32510056 - MIR SINE MIR -91 117 68 338 330 40 0 chr10 113079232 113079332 -32509956 + L2 LINE L2 3164 3267 -5 279 327 39 0 chr10 113080848 113080952 -32508336 - MER91A DNA MER1_type -85 111 4 300 308 242 19 chr10 113080989 113081200 -32508088 - MIR SINE MIR -1 261 4 414 243 10 63 chr10 113081430 113081558 -32507730 - MIR SINE MIR -83 125 3 232 269 228 35 chr10 113081593 113081764 -32507524 + MIR SINE MIR 41 244 -18 215 197 136 0 chr10 113082239 113082305 -32506983 + MIR SINE MIR 117 191 -71 327 293 115 29 chr10 113083192 113083366 -32505922 - MIR SINE MIR -66 196 8 303 340 0 0 chr10 113085385 113085482 -32503806 - MIR SINE MIR -68 140 44 586 271 77 0 chr10 113086216 113086397 -32502891 - MIR SINE MIR -29 233 39 313 235 0 0 chr10 113086737 113086805 -32502483 + MER116 DNA Mariner 1 68 -12 294 238 116 82 chr10 113086943 113087090 -32502198 + MIR SINE MIR 41 192 -70 317 335 151 11 chr10 113088293 113088472 -32500816 + L3 LINE CR1 1371 1574 -3 1950 139 0 13 chr10 113088509 113088819 -32500469 + AluSx SINE Alu 1 306 -6 223 265 0 0 chr10 113089829 113089878 -32499410 + L3 LINE CR1 818 866 -711 361 292 93 63 chr10 113089923 113090162 -32499126 - MIR SINE MIR -2 260 10 372 295 46 117 chr10 113090180 113090461 -32498827 - MIR SINE MIR 0 262 2 545 277 20 14 chr10 113090480 113090628 -32498660 + L3 LINE CR1 958 1106 -471 376 324 34 0 chr10 113090689 113090837 -32498451 + L3 LINE CR1 1314 1466 -111 190 317 239 24 chr10 113091730 113091897 -32497391 + MIR SINE MIR 3 205 -57 1802 134 40 7 chr10 113092283 113092582 -32496706 + AluJb SINE Alu 1 309 -3 313 233 73 40 chr10 113092617 113092767 -32496521 + L1ME4a LINE L1 5967 6121 0 203 349 0 0 chr10 113092972 113093035 -32496253 - L2 LINE L2 -7 3265 3203 21 0 0 0 chr10 113093321 113093342 -32495946 + GC_rich Low_complexity Low_complexity 1 21 0 2478 53 3 0 chr10 113094402 113094701 -32494587 + AluY SINE Alu 1 300 -11 180 321 60 0 chr10 113094716 113094800 -32494488 + MIR SINE MIR 104 192 -70 252 122 0 0 chr10 113094987 113095028 -32494260 + MER103 DNA DNA 52 92 -74 428 335 17 0 chr10 113095201 113095347 -32493941 - MER5A DNA MER1_type -24 165 1 1829 171 10 10 chr10 113095618 113095927 -32493361 + AluSx SINE Alu 3 311 -1 23 0 0 0 chr10 113096016 113096039 -32493249 + AT_rich Low_complexity Low_complexity 1 23 0 319 318 122 5 chr10 113096448 113096637 -32492651 + L1M4 LINE L1 3958 4168 -1978 2402 76 0 7 chr10 113096872 113097175 -32492113 + AluY SINE Alu 1 301 -10 229 321 179 0 chr10 113097357 113097463 -32491825 + L2 LINE L2 3146 3270 -2 270 211 11 53 chr10 113097465 113097514 -32491774 + GA-rich Low_complexity Low_complexity 2 47 -45 2062 108 10 7 chr10 113097514 113097811 -32491477 + AluSc SINE Alu 1 298 -11 270 211 11 53 chr10 113097811 113097856 -32491432 + GA-rich Low_complexity Low_complexity 47 92 0 766 254 12 0 chr10 113099566 113099731 -32489557 - MER91A DNA MER1_type -12 184 18 336 277 76 17 chr10 113100919 113101038 -32488250 + MIR SINE MIR 18 143 -65 1869 128 18 0 chr10 113102440 113102721 -32486567 + AluJo SINE Alu 13 298 -14 297 51 0 0 chr10 113105475 113105514 -32483774 + (CA)n Simple_repeat Simple_repeat 1 39 0 207 0 0 0 chr10 113105513 113105536 -32483752 + (TC)n Simple_repeat Simple_repeat 1 23 0 * 431 254 115 8 chr10 113107956 113108086 -32481202 + MIR3 SINE MIR 64 207 -1 21 0 0 0 chr10 113108373 113108394 -32480894 + AT_rich Low_complexity Low_complexity 1 21 0 200 83 0 28 chr10 113108830 113108866 -32480422 + (GGGTG)n Simple_repeat Simple_repeat 3 37 0 219 69 0 0 chr10 113111936 113111965 -32477323 + (GGA)n Simple_repeat Simple_repeat 3 31 0 255 261 130 0 chr10 113112733 113112825 -32476463 - MIR SINE MIR -112 150 47 303 313 7 47 chr10 113114213 113114363 -32474925 - MER103 DNA DNA -20 146 3 396 0 0 0 chr10 113115027 113115071 -32474217 + (CAT)n Simple_repeat Simple_repeat 2 45 0 1112 156 0 21 chr10 113115074 113115260 -32474028 - AluJo SINE Alu -27 285 104 243 0 0 0 chr10 113115282 113115309 -32473979 + (A)n Simple_repeat Simple_repeat 1 27 0 7192 56 14 17 chr10 113115310 113117020 -32472268 + SVA Other Other 1 1386 0 698 202 46 12 chr10 113117092 113117265 -32472023 + MLT1C LTR MaLR 289 467 0 455 274 151 17 chr10 113117298 113117477 -32471811 - L1M4 LINE L1 -1526 4620 4418 192 77 0 0 chr10 113117485 113117511 -32471777 + (A)n Simple_repeat Simple_repeat 1 26 0 705 125 125 0 chr10 113117512 113117616 -32471672 - AluJo SINE Alu -194 118 2 1616 163 35 7 chr10 113117729 113117826 -32471462 + AluJo SINE Alu 22 115 -197 213 39 0 0 chr10 113117826 113117852 -32471436 + (CA)n Simple_repeat Simple_repeat 1 26 0 1616 163 35 7 chr10 113117852 113118037 -32471251 + AluJo SINE Alu 115 312 0 471 298 8 8 chr10 113118411 113118532 -32470756 - L2 LINE L2 0 3313 3193 489 320 105 0 chr10 113118704 113118885 -32470403 + MIR SINE MIR 50 249 -13 447 291 33 13 chr10 113119435 113119586 -32469702 - MER117 DNA MER1_type -41 156 3 320 281 11 22 chr10 113120799 113120888 -32468400 + L2 LINE L2 3170 3257 -15 235 234 277 32 chr10 113122498 113122592 -32466696 + MIR SINE MIR 34 150 -58 1528 160 58 51 chr10 113122824 113123118 -32466170 + AluJo SINE Alu 1 296 -16 260 100 0 20 chr10 113123303 113123353 -32465935 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 195 368 145 20 chr10 113123877 113124029 -32465259 - MIR3 SINE MIR -5 203 33 432 0 0 0 chr10 113124333 113124381 -32464907 + (TG)n Simple_repeat Simple_repeat 2 49 0 203 81 0 54 chr10 113124868 113124905 -32464383 + (CGGGG)n Simple_repeat Simple_repeat 1 35 0 180 0 0 0 chr10 113129567 113129587 -32459701 + (GA)n Simple_repeat Simple_repeat 2 21 0 231 288 18 9 chr10 113129709 113129820 -32459468 + (TG)n Simple_repeat Simple_repeat 1 112 0 231 319 60 26 chr10 113131826 113131942 -32457346 - L2 LINE L2 -1 3271 3152 * 306 312 48 16 chr10 113131919 113132044 -32457244 + L2 LINE L2 3142 3270 -2 289 361 9 9 chr10 113132478 113132586 -32456702 + MIR SINE MIR 30 137 -71 479 274 175 22 chr10 113132787 113133017 -32456271 - MIR SINE MIR -22 240 4 196 371 14 0 chr10 113133222 113133292 -32455996 + MIR SINE MIR 44 114 -94 252 196 18 0 chr10 113133852 113133908 -32455380 + (CA)n Simple_repeat Simple_repeat 1 57 0 1943 151 10 0 chr10 113134460 113134759 -32454529 + AluSx SINE Alu 1 302 -10 255 61 0 0 chr10 113135456 113135489 -32453799 + (A)n Simple_repeat Simple_repeat 1 33 0 951 140 0 0 chr10 113135494 113135637 -32453651 + FLAM_C SINE Alu 1 143 0 535 167 103 56 chr10 113139485 113139611 -32449677 + FLAM_C SINE Alu 2 133 0 276 284 9 43 chr10 113139630 113139746 -32449542 + MLT1K LTR MaLR 411 522 -66 724 132 22 7 chr10 113139761 113139897 -32449391 - MER44D DNA MER2_type 0 609 472 1327 182 9 0 chr10 113139897 113140128 -32449160 + AluJo SINE Alu 65 297 -15 940 129 119 10 chr10 113140140 113140342 -32448946 - MER44D DNA MER2_type -115 494 1 896 103 0 0 chr10 113140696 113140813 -32448475 + FLAM_C SINE Alu 11 127 -16 887 189 0 0 chr10 113140878 113141026 -32448262 + AluJb SINE Alu 144 291 -21 2195 101 3 3 chr10 113141544 113141841 -32447447 + AluSc SINE Alu 1 297 -12 2091 131 7 0 chr10 113141986 113142291 -32446997 + AluSx SINE Alu 1 307 -5 2239 104 0 16 chr10 113142292 113142608 -32446680 + AluSx SINE Alu 2 312 0 224 312 70 42 chr10 113143235 113143392 -32445896 - MIR SINE MIR -32 230 11 524 316 17 11 chr10 113143617 113143794 -32445494 + MIR SINE MIR 37 214 -48 2333 82 0 3 chr10 113144977 113145280 -32444008 + AluY SINE Alu 1 302 -9 322 298 88 18 chr10 113145729 113145843 -32443445 + MIR SINE MIR 39 160 -102 330 253 25 0 chr10 113145895 113145974 -32443314 - L2 LINE L2 -5 3308 3228 756 252 102 10 chr10 113147372 113147578 -32441710 + MIR SINE MIR 1 225 -37 2498 81 0 0 chr10 113148180 113148489 -32440799 + AluSc SINE Alu 1 309 0 2270 110 0 0 chr10 113148883 113149192 -32440096 + AluSx SINE Alu 1 309 -3 182 338 120 56 chr10 113149843 113150059 -32439229 + L3 LINE CR1 630 859 -718 489 170 38 9 chr10 113150824 113150930 -32438358 - Tigger5 DNA MER2_type 0 2323 2215 252 188 0 0 chr10 113150922 113150970 -32438318 - Tigger5 DNA MER2_type -2268 55 8 * 717 269 132 14 chr10 113151009 113151374 -32437914 + MER113 DNA MER1_type? 110 517 -4 198 0 0 0 chr10 113151506 113151528 -32437760 + (GAAAA)n Simple_repeat Simple_repeat 2 23 0 821 292 40 35 chr10 113152195 113152596 -32436692 + MER113 DNA MER1_type? 54 456 -65 2274 83 0 13 chr10 113152680 113152993 -32436295 + AluY SINE Alu 1 309 -2 1985 130 3 23 chr10 113153148 113153455 -32435833 + AluJb SINE Alu 1 301 -11 374 248 91 8 chr10 113153644 113153765 -32435523 - MIR SINE MIR -82 180 50 309 336 73 7 chr10 113154797 113154934 -32434354 + MIR SINE MIR 102 247 -15 330 263 169 8 chr10 113155495 113155613 -32433675 + L2 LINE L2 3136 3272 0 403 294 14 42 chr10 113158122 113158265 -32431023 - MIR3 SINE MIR -50 158 20 199 47 0 93 chr10 113159012 113159055 -32430233 + (CAG)n Simple_repeat Simple_repeat 2 40 0 215 271 29 29 chr10 113159168 113159238 -32430050 + MIR SINE MIR 63 132 -76 282 255 106 11 chr10 113159741 113159835 -32429453 + L2 LINE L2 3168 3270 -2 371 303 19 39 chr10 113160422 113160577 -32428711 + MIR SINE MIR 70 221 -41 224 314 210 12 chr10 113161863 113162111 -32427177 + L2 LINE L2 3015 3311 -2 240 364 54 8 chr10 113163206 113163335 -32425953 - MIR3 SINE MIR -11 197 63 210 327 0 0 chr10 113163354 113163406 -32425882 - MIR SINE MIR -2 260 209 769 196 0 7 chr10 113163407 113163424 -32425864 - AluJo SINE Alu -175 137 121 186 43 0 0 chr10 113163424 113163447 -32425841 + (TTA)n Simple_repeat Simple_repeat 2 24 0 769 196 0 7 chr10 113163447 113163567 -32425721 - AluJo SINE Alu -191 121 1 488 241 68 58 chr10 113163570 113163761 -32425527 - MIR SINE MIR -68 194 2 2162 137 0 0 chr10 113164341 113164648 -32424640 + AluSx SINE Alu 1 307 -5 2334 80 7 0 chr10 113165398 113165697 -32423591 + AluSq SINE Alu 1 301 -12 194 339 15 31 chr10 113167637 113167702 -32421586 - L3b LINE CR1 -5 1578 1515 274 269 64 0 chr10 113167713 113167791 -32421497 - MIR SINE MIR -113 149 67 249 250 12 12 chr10 113170175 113170255 -32419033 + G-rich Low_complexity Low_complexity 2 81 0 183 273 148 23 chr10 113171092 113171180 -32418108 + MIR SINE MIR 35 133 -129 23 0 0 0 chr10 113171189 113171212 -32418076 + GC_rich Low_complexity Low_complexity 1 23 0 2837 6 0 0 chr10 113171237 113171549 -32417739 - AluYb8 SINE Alu -6 312 1 1933 148 14 0 chr10 113171664 113171954 -32417334 - AluJb SINE Alu -17 295 2 425 240 88 53 chr10 113172353 113172524 -32416764 - MER5B DNA MER1_type 0 178 2 486 288 112 6 chr10 113173234 113173404 -32415884 - MIR SINE MIR -70 192 5 2242 108 0 19 chr10 113173507 113173823 -32415465 - AluSx SINE Alu -2 310 1 240 337 0 31 chr10 113173825 113173923 -32415365 + L2 LINE L2 3177 3271 -1 520 289 50 11 chr10 113175409 113175589 -32413699 + MIR SINE MIR 10 196 -66 214 247 13 26 chr10 113176096 113176173 -32413115 - MIR SINE MIR -98 110 35 345 343 0 0 chr10 113177146 113177254 -32412034 - MIR SINE MIR -148 114 7 225 200 0 0 chr10 113178185 113178230 -32411058 + MIR SINE MIR 112 156 -106 356 333 28 21 chr10 113178374 113178518 -32410770 - MIR SINE MIR -28 234 90 765 254 22 5 chr10 113178688 113178873 -32410415 - MIR SINE MIR 0 262 75 698 240 107 24 chr10 113179046 113179290 -32409998 + MIR SINE MIR 2 254 -8 894 203 11 0 chr10 113180044 113180226 -32409062 - MER58A DNA MER1_type -21 203 20 260 307 24 123 chr10 113180741 113180857 -32408431 + MIR3 SINE MIR 4 91 -117 2052 106 14 0 chr10 113180857 113181149 -32408139 + AluSx SINE Alu 1 296 -16 260 307 24 123 chr10 113181149 113181244 -32408044 + MIR3 SINE MIR 91 194 -14 328 281 71 71 chr10 113181406 113181602 -32407686 + MIR SINE MIR 21 216 -46 576 170 47 0 chr10 113182008 113182114 -32407174 + HY1 scRNA scRNA 1 111 -1 1951 141 3 3 chr10 113182132 113182436 -32406852 + AluJo SINE Alu 1 304 -8 2233 115 0 6 chr10 113183390 113183761 -32405527 + AluSg SINE Alu 1 369 0 632 260 30 6 chr10 113184013 113184182 -32405106 + MER45A DNA AcHobo 1 173 -5 337 211 0 0 chr10 113184402 113184473 -32404815 - MIR SINE MIR -84 124 54 483 240 172 62 chr10 113184489 113184611 -32404677 - MIR SINE MIR -12 250 98 2144 110 13 0 chr10 113184611 113184910 -32404378 + AluSq SINE Alu 1 303 -10 483 240 172 62 chr10 113184910 113184979 -32404309 - MIR SINE MIR -164 98 38 233 192 58 0 chr10 113186509 113186561 -32402727 + L2 LINE L2 3255 3309 -4 246 366 22 15 chr10 113187351 113187485 -32401803 + MIR SINE MIR 18 152 -56 203 333 58 58 chr10 113188010 113188166 -32401122 + L2 LINE L2 3085 3240 -32 2257 103 3 0 chr10 113188818 113189129 -32400159 - AluSx SINE Alu 0 312 1 1826 154 20 0 chr10 113189133 113189426 -32399862 - AluJb SINE Alu -12 300 2 1671 135 85 0 chr10 113190336 113190595 -32398693 + AluSg SINE Alu 1 281 -29 21 0 0 0 chr10 113190603 113190624 -32398664 + GC_rich Low_complexity Low_complexity 1 21 0 808 164 7 53 chr10 113190644 113190796 -32398492 + AluJb SINE Alu 1 145 -167 264 220 34 0 chr10 113190798 113190857 -32398431 - MER5A DNA MER1_type -74 115 55 2212 112 0 3 chr10 113191326 113191630 -32397658 + AluSg SINE Alu 1 303 -7 1460 177 6 85 chr10 113191928 113192091 -32397197 + AluJo SINE Alu 1 127 -185 1564 159 43 4 chr10 113192091 113192368 -32396920 + AluSx SINE Alu 11 298 -14 1460 177 6 85 chr10 113192368 113192532 -32396756 + AluJo SINE Alu 127 302 -10 2051 102 32 3 chr10 113193216 113193501 -32395787 - AluSx SINE Alu -19 293 1 1789 166 29 13 chr10 113193597 113193904 -32395384 + AluJo SINE Alu 1 312 0 2267 109 6 3 chr10 113193906 113194218 -32395070 + AluSq SINE Alu 1 313 0 302 212 212 0 chr10 113194226 113194311 -32394977 + MIR SINE MIR 81 183 -79 701 221 124 23 chr10 113194472 113194689 -32394599 - MIR SINE MIR -21 241 3 222 351 13 0 chr10 113194812 113194889 -32394399 - MIR SINE MIR -183 79 2 296 308 30 89 chr10 113195373 113195509 -32393779 - MIR SINE MIR 0 262 144 1277 241 32 66 chr10 113195509 113195596 -32393692 + MLT2C1 LTR ERVL 1 89 -308 2272 83 7 7 chr10 113195596 113195896 -32393392 - AluSx SINE Alu -10 302 3 1277 241 32 66 chr10 113195896 113196219 -32393069 + MLT2C1 LTR ERVL 89 397 0 296 308 30 89 chr10 113196219 113196319 -32392969 - MIR SINE MIR -118 144 40 896 254 104 61 chr10 113196371 113196835 -32392453 + L2 LINE L2 2524 3010 -303 244 316 147 0 chr10 113196866 113196961 -32392327 + L2 LINE L2 3141 3249 -23 934 273 115 62 chr10 113197223 113197713 -32391575 - L2 LINE L2 -85 3228 2766 1810 164 0 22 chr10 113197713 113198024 -32391264 - AluJo SINE Alu -8 304 1 934 273 115 62 chr10 113198024 113198233 -32391055 - L2 LINE L2 -547 2766 2570 2162 119 7 0 chr10 113198233 113198535 -32390753 + AluSq SINE Alu 1 304 -9 934 273 115 62 chr10 113198535 113198634 -32390654 - L2 LINE L2 -743 2570 2365 307 300 182 0 chr10 113198898 113199068 -32390220 + MIR SINE MIR 49 249 -13 769 295 39 31 chr10 113199068 113199173 -32390115 - MIR SINE MIR 0 262 159 2059 144 39 79 chr10 113199173 113199604 -32389684 - MLT2D LTR ERVL 0 414 1 769 295 39 31 chr10 113199604 113199752 -32389536 - MIR SINE MIR -103 159 7 443 257 37 37 chr10 113199930 113200066 -32389222 - MIR3 SINE MIR -33 175 40 555 240 191 22 chr10 113200087 113200270 -32389018 - MIR SINE MIR -2 260 47 209 98 24 0 chr10 113202076 113202117 -32387171 + (CCCG)n Simple_repeat Simple_repeat 1 42 0 261 57 0 0 chr10 113202135 113202170 -32387118 + (CCCCG)n Simple_repeat Simple_repeat 2 36 0 246 384 10 10 chr10 113203221 113203320 -32385968 - MER5B DNA MER1_type -73 105 7 194 229 21 21 chr10 113203361 113203409 -32385879 + MER5A DNA MER1_type 91 138 -51 328 220 147 9 chr10 113203458 113203567 -32385721 - MIR SINE MIR -57 205 82 1355 155 21 13 chr10 113204143 113204382 -32384906 + AluJo SINE Alu 66 306 -6 281 252 244 8 chr10 113204441 113204568 -32384720 - MER5A DNA MER1_type -2 187 31 303 308 19 56 chr10 113204755 113204862 -32384426 - MIR SINE MIR -61 147 45 539 290 42 29 chr10 113205937 113206175 -32383113 + MIR SINE MIR 22 262 0 226 277 31 0 chr10 113206806 113206871 -32382417 - MIR SINE MIR -118 144 78 284 227 13 13 chr10 113207999 113208074 -32381214 + MIR SINE MIR 33 107 -101 418 285 181 0 chr10 113208074 113208267 -32381021 - MER112 DNA MER1_type -2 258 31 201 319 83 0 chr10 113208274 113208346 -32380942 + MIR SINE MIR 118 195 -67 625 254 82 2 chr10 113209027 113209220 -32380068 + MIR SINE MIR 35 237 -25 1062 53 53 10 chr10 113209790 113210148 -32379140 + (TCCA)n Simple_repeat Simple_repeat 1 874 0 1032 46 54 0 chr10 113210148 113210628 -32378660 + (TCCA)n Simple_repeat Simple_repeat 1 506 0 847 43 68 0 chr10 113210814 113210976 -32378312 + (TCCA)n Simple_repeat Simple_repeat 3 175 0 231 36 0 0 chr10 113211436 113211464 -32377824 + (TG)n Simple_repeat Simple_repeat 1 28 0 294 244 126 16 chr10 113212172 113212299 -32376989 - MIR SINE MIR -88 174 34 183 350 34 8 chr10 113212274 113212391 -32376897 + L2 LINE L2 2937 3056 -216 * 934 191 39 34 chr10 113212450 113212654 -32376634 + MER3 DNA MER1_type 5 209 0 213 159 0 0 chr10 113212701 113212745 -32376543 + (TG)n Simple_repeat Simple_repeat 2 45 0 392 259 291 0 chr10 113212747 113212905 -32376383 + MIR SINE MIR 44 247 -15 232 321 37 46 chr10 113213210 113213319 -32375969 - MIR SINE MIR -73 135 28 211 325 58 8 chr10 113213655 113213775 -32375513 + MIR3 SINE MIR 4 129 -79 871 307 8 0 chr10 113214283 113214527 -32374761 - MIR SINE MIR -11 251 6 1724 79 9 9 chr10 113214649 113214878 -32374410 + AluSg/x SINE Alu 83 311 -1 281 266 250 8 chr10 113215372 113215496 -32373792 + L2 LINE L2 3116 3269 -3 231 274 16 16 chr10 113215665 113215727 -32373561 + L2 LINE L2 3010 3071 -201 2146 85 7 7 chr10 113216050 113216345 -32372943 - AluSg SINE Alu -15 295 1 876 138 0 0 chr10 113216374 113216497 -32372791 - FLAM_C SINE Alu -9 124 2 538 250 152 24 chr10 113216505 113216682 -32372606 - MIR SINE MIR -52 210 21 279 243 159 9 chr10 113217479 113217586 -32371702 + LTR16C LTR ERVL 367 489 -2 317 238 224 28 chr10 113218102 113218245 -32371043 + MIR3 SINE MIR 1 171 -37 473 237 75 56 chr10 113218524 113218674 -32370614 + MIR SINE MIR 52 198 -64 1994 116 39 0 chr10 113218674 113218958 -32370330 + AluSx SINE Alu 1 295 -17 1697 140 66 14 chr10 113218963 113219249 -32370039 + AluSx SINE Alu 3 303 -9 473 237 75 56 chr10 113219249 113219307 -32369981 + MIR SINE MIR 201 262 0 235 291 47 12 chr10 113219303 113219389 -32369899 - MIR SINE MIR -64 198 110 * 1508 164 0 4 chr10 113219643 113219906 -32369382 + AluJo SINE Alu 40 301 -11 1464 179 50 20 chr10 113220623 113220925 -32368363 + AluJo SINE Alu 1 311 -1 627 203 14 28 chr10 113220949 113221092 -32368196 + L1MB7 LINE L1 6033 6173 -11 332 262 79 48 chr10 113221272 113221398 -32367890 + LTR50 LTR ERVL 344 473 -322 263 337 123 5 chr10 113221709 113221896 -32367392 + MIR SINE MIR 22 230 -32 246 222 83 37 chr10 113222395 113222503 -32366785 + L2 LINE L2 2950 3062 -251 306 297 35 64 chr10 113222583 113222708 -32366580 - MIR SINE MIR -62 146 36 196 380 0 0 chr10 113222859 113222930 -32366358 + MIR SINE MIR 16 86 -122 233 390 130 0 chr10 113224016 113224185 -32365103 - MIR SINE MIR -12 250 60 216 276 17 0 chr10 113224256 113224314 -32364974 + L2 LINE L2 3213 3271 -1 183 245 61 0 chr10 113225563 113225612 -32363676 + MIR SINE MIR 94 145 -63 526 280 122 5 chr10 113225840 113226029 -32363259 - MIR SINE MIR -21 241 31 207 254 62 54 chr10 113226230 113226360 -32362928 - L2 LINE L2 -221 3051 2921 1903 119 3 42 chr10 113226857 113227167 -32362121 - AluJo SINE Alu -14 298 1 319 308 70 14 chr10 113227368 113227511 -32361777 + MIR SINE MIR 43 193 -69 390 42 0 0 chr10 113227611 113227659 -32361629 + (CA)n Simple_repeat Simple_repeat 2 49 0 1633 158 110 21 chr10 113227692 113228027 -32361261 + MLT1A1 LTR MaLR 1 365 0 454 322 47 6 chr10 113228166 113228337 -32360951 + MIR SINE MIR 14 191 -71 603 224 0 40 chr10 113228343 113228495 -32360793 - L2 LINE L2 -2 3311 3166 966 129 20 201 chr10 113228495 113228559 -32360729 - MLT1A1 LTR MaLR -1 364 290 2378 90 3 0 chr10 113228559 113228870 -32360418 - AluSx SINE Alu 0 312 1 966 129 20 201 chr10 113228870 113229099 -32360189 - MLT1A1 LTR MaLR -75 290 124 289 330 178 0 chr10 113230031 113230216 -32359072 - MIR SINE MIR -11 251 34 2142 122 0 3 chr10 113230871 113231174 -32358114 + AluSx SINE Alu 1 302 -10 839 178 7 0 chr10 113231317 113231452 -32357836 - AluJo SINE Alu -176 136 1 219 284 14 40 chr10 113231552 113231626 -32357662 - MIR SINE MIR -87 121 50 328 294 64 0 chr10 113231859 113231968 -32357320 + MER91C DNA MER1_type 1 116 -24 271 277 32 76 chr10 113232462 113232612 -32356676 + MIR SINE MIR 32 172 -68 297 260 0 0 chr10 113233336 113233413 -32355875 + (CCAA)n Simple_repeat Simple_repeat 1 77 0 580 203 6 16 chr10 113233449 113233631 -32355657 + (CCAA)n Simple_repeat Simple_repeat 1 180 0 2061 87 3 11 chr10 113234395 113234747 -32354541 + AluSx SINE Alu 1 350 0 265 298 39 39 chr10 113235193 113235297 -32353991 - MIR SINE MIR -77 185 82 495 210 24 16 chr10 113235315 113235439 -32353849 + L2 LINE L2 3189 3313 0 443 326 26 42 chr10 113235469 113235659 -32353629 + L3 LINE CR1 923 1109 -468 235 299 0 46 chr10 113236173 113236260 -32353028 + GA-rich Low_complexity Low_complexity 1 83 0 346 290 197 0 chr10 113237002 113237185 -32352103 + MIR SINE MIR 33 251 -11 517 213 42 58 chr10 113237239 113237446 -32351842 + MIR3 SINE MIR 8 206 -56 410 223 11 0 chr10 113237475 113237569 -32351719 - MER103 DNA DNA -50 116 22 566 265 5 58 chr10 113237596 113237728 -32351560 - MIR SINE MIR -71 191 69 1967 96 0 24 chr10 113237728 113238050 -32351238 - AluSx SINE Alu 0 315 1 566 265 5 58 chr10 113238050 113238105 -32351183 - MIR SINE MIR -193 69 13 198 143 0 0 chr10 113239067 113239102 -32350186 + (T)n Simple_repeat Simple_repeat 1 35 0 21 36 0 0 chr10 113239120 113239148 -32350140 + AT_rich Low_complexity Low_complexity 1 28 0 2019 141 0 0 chr10 113240010 113240309 -32348979 - AluJb SINE Alu -11 301 3 208 244 0 0 chr10 113240309 113240354 -32348934 - L2 LINE L2 -563 2751 2707 1074 177 86 18 chr10 113242608 113242856 -32346432 - AluJo SINE Alu 0 314 52 611 178 51 0 chr10 113242905 113243023 -32346265 - MIR SINE MIR -91 171 48 281 81 0 0 chr10 113243266 113243303 -32345985 + Alu SINE Alu 251 287 -15 2065 137 0 0 chr10 113243317 113243624 -32345664 + AluSx SINE Alu 1 307 -5 696 248 64 47 chr10 113243689 113243923 -32345365 - MIR SINE MIR 0 262 25 970 231 130 92 chr10 113245690 113246158 -32343130 + MLT1K LTR MaLR 88 573 -15 996 239 205 18 chr10 113246266 113246597 -32342691 - LTR16C LTR ERVL 0 491 99 1981 106 7 0 chr10 113247642 113247915 -32341373 - AluSp SINE Alu -10 303 29 201 74 0 0 chr10 113248301 113248328 -32340960 + (GGGA)n Simple_repeat Simple_repeat 1 27 0 251 283 11 11 chr10 113248752 113248844 -32340444 + MIR SINE MIR 43 134 -74 602 318 15 5 chr10 113248947 113249142 -32340146 - MIR SINE MIR -19 243 47 304 226 0 0 chr10 113249188 113249250 -32340038 - L2 LINE L2 -500 2814 2753 249 83 0 0 chr10 113249651 113249687 -32339601 + (TTCC)n Simple_repeat Simple_repeat 1 36 0 573 297 83 74 chr10 113249688 113250109 -32339179 - L2 LINE L2 -1 3312 2888 1453 204 52 86 chr10 113250657 113250723 -32338565 - MLT1C LTR MaLR -12 455 388 1800 135 7 14 chr10 113250723 113251011 -32338277 + AluJb SINE Alu 11 296 -16 1453 204 52 86 chr10 113251011 113251410 -32337878 - MLT1C LTR MaLR -79 388 6 1467 168 79 4 chr10 113252241 113252521 -32336767 - AluJo SINE Alu -11 301 1 2447 63 3 0 chr10 113253000 113253303 -32335985 - AluSp SINE Alu -9 304 1 1336 252 56 31 chr10 113253762 113254239 -32335049 + MLT1K LTR MaLR 55 588 0 450 362 32 5 chr10 113254240 113254425 -32334863 + MIR SINE MIR 61 250 -12 1818 136 43 7 chr10 113255158 113255459 -32333829 - AluJb SINE Alu 0 312 1 242 287 261 9 chr10 113255460 113255690 -32333598 + L2 LINE L2 2687 2974 -340 198 0 0 0 chr10 113256653 113256675 -32332613 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 844 145 0 0 chr10 113256676 113256800 -32332488 - FLAM_C SINE Alu -19 124 1 800 248 5 35 chr10 113256942 113257144 -32332144 - MIR SINE MIR -10 252 57 206 244 209 0 chr10 113257307 113257393 -32331895 - L2 LINE L2 -7 3265 3162 287 278 24 8 chr10 113257464 113257590 -32331698 - L2 LINE L2 -265 3007 2880 234 77 0 0 chr10 113257819 113257858 -32331430 - AluSx SINE Alu -1 299 261 1093 126 84 0 chr10 113257860 113258027 -32331261 - AluSx SINE Alu -131 181 1 232 345 35 0 chr10 113258138 113258254 -32331034 - MIR3 SINE MIR -35 173 54 2285 182 110 28 chr10 113258464 113258902 -32330386 + MLT1F LTR MaLR 1 486 -56 1720 169 7 7 chr10 113258902 113259203 -32330085 - AluJb SINE Alu -11 301 1 2285 182 110 28 chr10 113259203 113259265 -32330023 + MLT1F LTR MaLR 486 542 0 252 387 17 29 chr10 113259293 113259466 -32329822 + MER5A DNA MER1_type 19 189 0 304 263 35 18 chr10 113259494 113259608 -32329680 - MIR3 SINE MIR -86 122 7 282 270 0 27 chr10 113260095 113260169 -32329119 - L2 LINE L2 0 3313 3242 1028 235 34 0 chr10 113260187 113260425 -32328863 - MIR SINE MIR -2 260 15 224 270 71 56 chr10 113260474 113260581 -32328707 - MIR SINE MIR -71 137 25 369 333 0 0 chr10 113261212 113261317 -32327971 - MIR3 SINE MIR -10 198 94 2123 108 0 49 chr10 113262048 113262372 -32326916 + AluSx SINE Alu 1 308 -4 473 283 164 23 chr10 113262372 113262591 -32326697 + MIR SINE MIR 12 261 -1 946 137 16 66 chr10 113263037 113263219 -32326069 - FRAM SINE Alu -4 172 1 490 259 177 0 chr10 113263810 113263968 -32325320 - MER5A DNA MER1_type 0 189 4 253 292 130 50 chr10 113264118 113264279 -32325009 - MIR SINE MIR -32 230 57 772 194 0 0 chr10 113264281 113264410 -32324878 - FLAM_A SINE Alu 0 133 5 241 248 118 57 chr10 113265536 113265782 -32323506 + L2 LINE L2 2422 2682 -632 621 302 170 25 chr10 113267067 113267461 -32321827 + L2 LINE L2 2863 3313 0 1291 250 64 9 chr10 113268779 113269107 -32320181 + LTR40a LTR ERVL 7 352 -167 1943 141 0 3 chr10 113269137 113269427 -32319861 + AluJb SINE Alu 1 289 -23 186 159 68 0 chr10 113269427 113269515 -32319773 + (TA)n Simple_repeat Simple_repeat 1 94 0 725 200 0 15 chr10 113269572 113269707 -32319581 - FLAM_A SINE Alu 0 133 1 452 191 11 2 chr10 113270012 113270118 -32319170 + L1MC4a LINE L1 7637 7914 -81 237 136 68 0 chr10 113270209 113270268 -32319020 + L1MD3 LINE L1 7933 7995 0 188 296 270 13 chr10 113270709 113270861 -32318427 + MIR SINE MIR 56 246 -16 1989 132 3 19 chr10 113270863 113271174 -32318114 - AluSx SINE Alu -2 310 5 1395 237 82 41 chr10 113272488 113272927 -32316361 + LTR16A1 LTR ERVL 1 457 0 251 289 89 0 chr10 113273451 113273541 -32315747 - MIR SINE MIR -2 260 163 486 274 60 27 chr10 113273601 113273827 -32315461 + MIR SINE MIR 7 247 -15 * 817 252 43 35 chr10 113273825 113274055 -32315233 - MIR SINE MIR 0 262 31 225 305 35 43 chr10 113274085 113274226 -32315062 + L2 LINE L2 2965 3104 -168 330 251 123 49 chr10 113275192 113275355 -32313933 + MIR SINE MIR 1 175 -87 229 229 52 52 chr10 113275773 113275869 -32313419 - MER5A DNA MER1_type 0 189 94 228 35 0 0 chr10 113276656 113276685 -32312603 + (T)n Simple_repeat Simple_repeat 1 29 0 345 258 133 39 chr10 113276798 113276926 -32312362 + MIR3 SINE MIR 35 174 -34 1016 260 175 9 chr10 113276928 113277597 -32311691 - L2 LINE L2 -2 3311 2545 1876 141 168 0 chr10 113277597 113277967 -32311321 - MSTB1 LTR MaLR 0 432 1 432 0 0 0 chr10 113277985 113278033 -32311255 + (TG)n Simple_repeat Simple_repeat 1 48 0 183 156 0 0 chr10 113278053 113278085 -32311203 + (TCCA)n Simple_repeat Simple_repeat 1 32 0 2007 112 58 0 chr10 113278288 113278582 -32310706 - AluSx SINE Alu -1 311 1 308 303 66 59 chr10 113278838 113278990 -32310298 - L1ME4a LINE L1 -14 6107 5955 1464 199 31 3 chr10 113279063 113279349 -32309939 - AluJo SINE Alu -16 296 3 442 276 17 0 chr10 113279627 113279743 -32309545 - L1ME4a LINE L1 -338 5783 5666 196 270 14 68 chr10 113280227 113280301 -32308987 - L2 LINE L2 0 3272 3203 1553 126 84 19 chr10 113280320 113280583 -32308705 + AluSx SINE Alu 1 280 -32 450 36 0 0 chr10 113280589 113280645 -32308643 + (CA)n Simple_repeat Simple_repeat 2 57 0 2232 103 3 3 chr10 113281792 113282104 -32307184 + AluSq SINE Alu 1 312 -1 2290 103 0 3 chr10 113282279 113282591 -32306697 - AluSx SINE Alu -1 311 1 1654 177 17 7 chr10 113282591 113282885 -32306403 - AluJb SINE Alu -15 297 1 978 278 109 17 chr10 113282887 113283532 -32305756 - L1ME LINE L1 -4869 1673 1014 244 229 108 0 chr10 113283796 113283879 -32305409 - L1MDb LINE L1 -5094 1315 1224 563 223 9 0 chr10 113284831 113284943 -32304345 - MLT1D LTR MaLR -134 371 259 1870 146 0 29 chr10 113284955 113285264 -32304024 + AluJb SINE Alu 1 300 -12 426 69 0 0 chr10 113285264 113285322 -32303966 + (TG)n Simple_repeat Simple_repeat 2 59 0 2667 152 37 18 chr10 113285333 113285787 -32303501 - MLT1C LTR MaLR -4 463 1 622 259 0 0 chr10 113285941 113286084 -32303204 + MIR SINE MIR 120 262 0 346 271 64 26 chr10 113286595 113286778 -32302510 + MIR SINE MIR 19 211 -51 271 256 13 103 chr10 113286804 113286898 -32302390 + MIR SINE MIR 102 178 -84 2242 71 3 14 chr10 113286898 113287193 -32302095 + AluY SINE Alu 1 292 -19 271 256 13 103 chr10 113287193 113287254 -32302034 + MIR SINE MIR 178 243 -19 549 292 96 0 chr10 113287333 113287511 -32301777 + MIR SINE MIR 56 250 -12 1760 108 4 0 chr10 113287920 113288169 -32301119 - AluSx SINE Alu -13 299 50 692 290 177 20 chr10 113290056 113290401 -32298887 + MLT1J1 LTR MaLR 48 446 0 194 268 82 21 chr10 113290777 113290874 -32298414 - L3 LINE CR1 -84 1493 1391 280 323 223 0 chr10 113291059 113291189 -32298099 + MER5A DNA MER1_type 25 183 -6 804 309 49 49 chr10 113291389 113291566 -32297722 - L2 LINE L2 0 3313 3138 816 109 55 16 chr10 113291566 113291694 -32297594 + FLAM_C SINE Alu 1 133 0 804 309 49 49 chr10 113291694 113292329 -32296959 - L2 LINE L2 -175 3138 2503 310 200 0 24 chr10 113293564 113293649 -32295639 + GA-rich Low_complexity Low_complexity 1 83 0 223 180 20 0 chr10 113294841 113294891 -32294397 + GA-rich Low_complexity Low_complexity 2 52 0 402 303 23 95 chr10 113295089 113295237 -32294051 + MIR SINE MIR 2 124 -138 1432 205 20 7 chr10 113295237 113295539 -32293749 + AluJo SINE Alu 5 310 -2 402 303 23 95 chr10 113295539 113295654 -32293634 + MIR SINE MIR 124 246 -16 222 294 32 48 chr10 113295918 113296044 -32293244 - MER5A DNA MER1_type -22 167 44 390 279 71 14 chr10 113297059 113297199 -32292089 - MIR SINE MIR -78 184 37 2252 69 0 47 chr10 113297435 113297752 -32291536 + AluSx SINE Alu 1 302 -10 243 0 0 0 chr10 113298381 113298408 -32290880 + (CA)n Simple_repeat Simple_repeat 2 28 0 2389 47 3 3 chr10 113299006 113299304 -32289984 - AluY SINE Alu -13 298 1 418 267 76 70 chr10 113299350 113299474 -32289814 + MIR3 SINE MIR 30 157 -51 462 226 9 178 chr10 113299474 113299704 -32289584 + MER117 DNA MER1_type 4 194 -3 418 267 76 70 chr10 113299704 113299751 -32289537 + MIR3 SINE MIR 157 202 -6 683 294 36 18 chr10 113301341 113301562 -32287726 - MIR SINE MIR -29 233 9 340 282 112 15 chr10 113302181 113302387 -32286901 - L1MC4a LINE L1 -1875 5933 5708 857 138 31 129 chr10 113303916 113304140 -32285148 + MER3 DNA MER1_type 8 209 0 326 173 0 0 chr10 113304097 113304149 -32285139 - MER3 DNA MER1_type -119 90 39 * 374 272 25 119 chr10 113304449 113304692 -32284596 + L2 LINE L2 3031 3250 -22 653 123 18 0 chr10 113304694 113304808 -32284480 + GA-rich Low_complexity Low_complexity 1 116 0 1928 135 3 25 chr10 113304928 113305247 -32284041 + AluJb SINE Alu 1 312 0 914 172 5 50 chr10 113305595 113305708 -32283580 + MER53 DNA DNA 1 103 -86 1959 148 0 7 chr10 113305708 113306012 -32283276 - AluJb SINE Alu -8 304 3 914 172 5 50 chr10 113306012 113306096 -32283192 + MER53 DNA DNA 103 189 0 1051 155 12 0 chr10 113307162 113307330 -32281958 - FRAM SINE Alu -14 162 1 433 342 70 0 chr10 113307837 113308024 -32281264 - MIR SINE MIR -59 203 4 737 271 85 67 chr10 113309087 113309523 -32279765 + MLT1K LTR MaLR 141 584 -4 185 309 53 21 chr10 113310295 113310389 -32278899 + L2 LINE L2 3202 3298 -15 231 36 0 0 chr10 113310393 113310421 -32278867 + (CA)n Simple_repeat Simple_repeat 2 29 0 2183 113 0 0 chr10 113310553 113310854 -32278434 - AluSx SINE Alu -11 301 1 350 351 63 17 chr10 113310873 113311047 -32278241 - MER5A DNA MER1_type 0 189 8 268 209 23 70 chr10 113311078 113311164 -32278124 + L2 LINE L2 3186 3267 -5 200 250 25 117 chr10 113311620 113311740 -32277548 - MER5A DNA MER1_type -2 187 79 743 286 31 39 chr10 113312254 113312513 -32276775 - MIR SINE MIR 0 262 6 3375 137 53 20 chr10 113312574 113313160 -32276128 - MER4B LTR ERV1 -5 605 1 2252 97 0 3 chr10 113313163 113313472 -32275816 - AluY SINE Alu -3 308 1 239 218 18 0 chr10 113314319 113314374 -32274914 - MIR SINE MIR -122 86 31 1205 182 18 9 chr10 113314459 113314679 -32274609 + AluJo SINE Alu 1 222 -90 245 208 0 0 chr10 113314679 113314727 -32274561 + Alu SINE Alu 88 135 -167 594 319 6 6 chr10 113316370 113316533 -32272755 + MER91A DNA MER1_type 2 164 -32 2062 128 3 0 chr10 113317097 113317401 -32271887 - AluSx SINE Alu -7 305 1 321 26 0 0 chr10 113318509 113318547 -32270741 + (TCCC)n Simple_repeat Simple_repeat 4 41 0 1882 116 7 20 chr10 113318547 113318839 -32270449 - AluSx SINE Alu -24 288 1 209 320 39 13 chr10 113318909 113318987 -32270301 + MIR SINE MIR 117 196 -66 302 374 92 10 chr10 113319365 113319560 -32269728 + MIR SINE MIR 49 259 -3 649 180 12 0 chr10 113319662 113319834 -32269454 + (CA)n Simple_repeat Simple_repeat 2 175 0 743 311 22 13 chr10 113320220 113320448 -32268840 - MIR SINE MIR -13 249 20 278 211 155 63 chr10 113320665 113320807 -32268481 + MIR SINE MIR 97 251 -11 276 292 124 57 chr10 113321693 113322161 -32267127 + L1ME4a LINE L1 5556 6065 -56 2067 140 3 7 chr10 113322161 113322468 -32266820 - AluJo SINE Alu -6 306 1 276 292 124 57 chr10 113322468 113322519 -32266769 + L1ME4a LINE L1 6065 6111 -10 518 224 151 13 chr10 113322661 113322813 -32266475 + MER5B DNA MER1_type 5 177 -1 204 67 0 0 chr10 113322850 113322880 -32266408 + (A)n Simple_repeat Simple_repeat 1 30 0 753 305 92 10 chr10 113323172 113323467 -32265821 + L3 LINE CR1 1179 1497 -80 362 307 238 12 chr10 113323565 113323809 -32265479 - L2 LINE L2 -9 3304 3006 1331 181 15 25 chr10 113323883 113324209 -32265079 + L1MB8 LINE L1 4964 5286 -860 338 117 50 33 chr10 113324216 113324336 -32264952 + (TA)n Simple_repeat Simple_repeat 1 122 0 2170 186 37 18 chr10 113324337 113324459 -32264829 + L1MA9 LINE L1 5783 5901 -411 2411 107 0 0 chr10 113324459 113324769 -32264519 + AluSg SINE Alu 1 310 0 2170 186 37 18 chr10 113324769 113325136 -32264152 + L1MA9 LINE L1 5901 6281 -31 2584 177 11 52 chr10 113325139 113325692 -32263596 + L1MB8 LINE L1 5272 5802 -371 1856 123 43 63 chr10 113325692 113325994 -32263294 - AluSx SINE Alu -16 296 1 1703 96 3 73 chr10 113326002 113326222 -32263066 - L1PA14 LINE L1 0 6161 5966 2096 106 0 0 chr10 113326222 113326486 -32262802 - AluSx SINE Alu -43 269 6 1703 96 3 73 chr10 113326486 113326566 -32262722 - L1PA14 LINE L1 -195 5966 5882 1876 144 29 34 chr10 113326566 113326946 -32262342 + L1MB8 LINE L1 5794 6172 -6 339 295 75 78 chr10 113327963 113328376 -32260912 - L2 LINE L2 -23 3249 2838 681 293 15 5 chr10 113329783 113329988 -32259300 + MIR SINE MIR 50 256 -6 2128 108 56 0 chr10 113329990 113330278 -32259010 - AluSx SINE Alu -7 305 2 1940 142 0 44 chr10 113330400 113330717 -32258571 - AluJb SINE Alu -9 303 1 2183 119 44 0 chr10 113330748 113331041 -32258247 - AluSx SINE Alu -6 306 1 620 289 73 39 chr10 113331591 113332003 -32257285 + L1ME3 LINE L1 5285 5710 -411 517 279 42 51 chr10 113332355 113332570 -32256718 - MIR SINE MIR -29 233 21 324 280 40 16 chr10 113333324 113333449 -32255839 - L3 LINE CR1 -193 1384 1257 1668 169 55 0 chr10 113333665 113333938 -32255350 - AluSx SINE Alu -24 288 1 350 212 24 0 chr10 113334197 113334282 -32255006 + L1MB2 LINE L1 5961 6047 -124 312 174 0 0 chr10 113334287 113334356 -32254932 - L1M4 LINE L1 -1733 4413 4345 379 246 60 15 chr10 113334398 113334532 -32254756 - L3 LINE CR1 -854 723 584 2600 57 0 0 chr10 113334613 113334913 -32254375 - AluY SINE Alu -11 300 1 453 271 90 7 chr10 113335127 113335271 -32254017 - MIR SINE MIR -105 157 2 343 287 0 11 chr10 113335596 113335683 -32253605 + L2 LINE L2 3227 3312 -1 517 247 119 31 chr10 113336262 113336456 -32252832 + MIR SINE MIR 20 230 -32 186 260 55 41 chr10 113336542 113336615 -32252673 + L2 LINE L2 3112 3185 -87 395 264 34 34 chr10 113336621 113336769 -32252519 + MIR SINE MIR 9 156 -106 223 269 0 0 chr10 113338383 113338435 -32250853 - L2 LINE L2 -2 3270 3219 260 146 0 21 chr10 113339232 113339285 -32250003 + L1M3 LINE L1 5480 5534 -635 316 310 63 26 chr10 113339375 113339615 -32249673 + L1ME3 LINE L1 5685 5929 -241 227 281 111 33 chr10 113340009 113340162 -32249126 - L1MC/D LINE L1 -1882 5926 5762 588 195 23 8 chr10 113340183 113340311 -32248977 + MLT1I LTR MaLR 2 131 -278 260 194 0 6 chr10 113340330 113340394 -32248894 - L1MB7 LINE L1 0 6166 6105 708 161 42 0 chr10 113340394 113340512 -32248776 + FLAM_C SINE Alu 2 124 -19 1900 146 0 20 chr10 113340533 113340875 -32248413 - L1MB7 LINE L1 -56 6128 5794 442 275 174 23 chr10 113340875 113341093 -32248195 + MLT1I LTR MaLR 157 407 -2 219 69 0 0 chr10 113341216 113341245 -32248043 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 3353 34 34 9 chr10 113341319 113341755 -32247533 + L1PA5 LINE L1 5708 6154 0 489 301 71 0 chr10 113341757 113341930 -32247358 - L1MB7 LINE L1 -529 5639 5456 261 273 37 15 chr10 113342257 113342311 -32246977 + L1MB8 LINE L1 5628 5679 -442 246 95 0 0 chr10 113342311 113342353 -32246935 + (TA)n Simple_repeat Simple_repeat 2 43 0 261 273 37 15 chr10 113342353 113342426 -32246862 + L1MB8 LINE L1 5679 5764 -357 288 227 52 10 chr10 113342456 113342553 -32246735 + MLT1L LTR MaLR 508 608 -7 1355 162 76 17 chr10 113343150 113343452 -32245836 + L1MB8 LINE L1 5859 6178 0 521 184 10 19 chr10 113343563 113343666 -32245622 - MIR SINE MIR -85 177 76 380 258 133 0 chr10 113344836 113344964 -32244324 + MIR SINE MIR 48 192 -70 307 179 22 43 chr10 113345175 113345359 -32243929 + (CA)n Simple_repeat Simple_repeat 1 180 0 280 248 26 26 chr10 113345371 113345484 -32243804 + (CA)n Simple_repeat Simple_repeat 2 114 0 266 115 19 0 chr10 113345505 113345557 -32243731 + (CA)n Simple_repeat Simple_repeat 1 53 0 187 220 20 20 chr10 113346150 113346200 -32243088 + MIR SINE MIR 33 82 -126 238 167 24 0 chr10 113346213 113346255 -32243033 - LTR16C LTR ERVL 0 491 449 186 246 62 46 chr10 113346532 113346597 -32242691 + MIR SINE MIR 98 163 -99 921 228 34 13 chr10 113347142 113347375 -32241913 - MIR SINE MIR -17 245 8 570 253 23 40 chr10 113348260 113348434 -32240854 - MIR SINE MIR -12 250 80 386 307 92 0 chr10 113348561 113348724 -32240564 - MIR SINE MIR -76 186 9 551 190 109 45 chr10 113349472 113349693 -32239595 + MIR SINE MIR 28 262 0 1126 232 187 40 chr10 113350453 113350693 -32238595 + L2 LINE L2 2796 2999 -314 2578 60 0 3 chr10 113350693 113350994 -32238294 + AluY SINE Alu 1 300 -11 1126 232 187 40 chr10 113350994 113351111 -32238177 + L2 LINE L2 2999 3097 -216 2532 136 39 29 chr10 113351111 113351595 -32237693 - L1MA4 LINE L1 0 6300 5812 1126 232 187 40 chr10 113351595 113351713 -32237575 + L2 LINE L2 3097 3313 0 517 164 42 28 chr10 113351955 113352103 -32237185 - MIR SINE MIR -63 145 27 309 287 37 28 chr10 113352140 113352248 -32237040 + LTR16C LTR ERVL 68 176 -315 380 212 126 53 chr10 113352640 113352791 -32236497 + MIR SINE MIR 48 209 -53 220 343 89 7 chr10 113353569 113353715 -32235573 + MIR SINE MIR 99 256 -6 3979 65 2 58 chr10 113353716 113353892 -32235396 + MER41A LTR ERV1 1 185 -369 2244 114 0 22 chr10 113353892 113354209 -32235079 + AluSx SINE Alu 1 310 -2 3979 65 2 58 chr10 113354209 113354619 -32234669 + MER41A LTR ERV1 185 554 0 394 296 10 87 chr10 113355682 113355888 -32233400 + MIR SINE MIR 27 216 -46 943 185 19 0 chr10 113355998 113356160 -32233128 - FRAM SINE Alu -12 164 1 1732 166 3 39 chr10 113356168 113356475 -32232813 - AluJb SINE Alu -16 296 1 2341 101 0 0 chr10 113356507 113356803 -32232485 + AluSx SINE Alu 1 296 -16 207 114 0 0 chr10 113357045 113357080 -32232208 + (TCC)n Simple_repeat Simple_repeat 2 36 0 521 206 14 139 chr10 113357682 113357905 -32231383 - MIR SINE MIR -10 252 58 577 239 81 36 chr10 113358056 113358278 -32231010 + MIR SINE MIR 25 256 -6 303 214 111 2 chr10 113359802 113359898 -32229390 - MIR SINE MIR -69 139 36 348 309 50 29 chr10 113360387 113360526 -32228762 + MIR SINE MIR 31 172 -90 402 291 0 10 chr10 113361765 113361868 -32227420 + MIR3 SINE MIR 96 197 -11 868 216 53 18 chr10 113362188 113362415 -32226873 - MIR SINE MIR 0 262 28 29 47 0 0 chr10 113364194 113364237 -32225051 + GC_rich Low_complexity Low_complexity 1 43 0 206 228 0 38 chr10 113364330 113364409 -32224879 + (CCCG)n Simple_repeat Simple_repeat 1 76 0 255 272 11 56 chr10 113364554 113364734 -32224554 + G-rich Low_complexity Low_complexity 1 172 0 186 235 0 39 chr10 113366711 113366762 -32222526 - L2 LINE L2 0 3272 3224 421 296 38 8 chr10 113367111 113367243 -32222045 - MIR3 SINE MIR 0 208 73 206 271 0 0 chr10 113367903 113367951 -32221337 + L2 LINE L2 3212 3259 -13 261 311 44 0 chr10 113368036 113368126 -32221162 + MIR SINE MIR 29 122 -86 227 282 0 28 chr10 113368343 113368414 -32220874 + CT-rich Low_complexity Low_complexity 2 70 0 247 219 16 47 chr10 113370027 113370091 -32219197 - MLT1K LTR MaLR -339 249 188 908 208 0 12 chr10 113371252 113371425 -32217863 + FAM SINE Alu 1 171 -4 398 296 0 32 chr10 113371720 113371845 -32217443 + L2 LINE L2 3193 3313 0 2158 135 3 0 chr10 113371949 113372260 -32217028 + AluSx SINE Alu 1 312 0 1286 190 31 0 chr10 113372613 113372839 -32216449 - MER21B LTR ERV1 -630 233 1 1093 231 35 11 chr10 113372841 113373127 -32216161 + L1ME3 LINE L1 5779 6071 -91 551 198 144 0 chr10 113373389 113373500 -32215788 + FLAM_A SINE Alu 5 131 -2 1306 99 0 0 chr10 113373502 113373663 -32215625 + AluSg SINE Alu 1 161 -149 739 258 48 19 chr10 113374080 113374394 -32214894 - L1ME LINE L1 -5182 888 566 414 290 56 12 chr10 113374427 113374589 -32214699 - L1ME LINE L1 -5854 216 48 21 0 0 0 chr10 113374697 113374718 -32214570 + AT_rich Low_complexity Low_complexity 1 21 0 899 188 0 7 chr10 113374731 113374880 -32214408 + FAM SINE Alu 2 149 -36 1813 186 0 0 chr10 113375561 113375867 -32213421 - AluJb SINE Alu -6 306 1 438 169 186 34 chr10 113375868 113375937 -32213351 - MER5A DNA MER1_type -6 183 126 2434 122 2 49 chr10 113375937 113375968 -32213320 + MLT1B LTR MaLR 1 32 -358 1971 151 3 3 chr10 113375968 113376267 -32213021 - AluJb SINE Alu -13 299 1 2434 122 2 49 chr10 113376267 113376427 -32212861 + MLT1B LTR MaLR 32 198 -192 2482 89 0 0 chr10 113376427 113376730 -32212558 + AluSq SINE Alu 1 303 -10 2434 122 2 49 chr10 113376730 113376946 -32212342 + MLT1B LTR MaLR 198 390 0 438 169 186 34 chr10 113376946 113377029 -32212259 - MER5A DNA MER1_type -63 126 4 544 238 98 49 chr10 113377270 113377434 -32211854 - Charlie8 DNA MER1_type -2154 263 92 284 247 35 35 chr10 113377466 113377551 -32211737 + L1ME3 LINE L1 6018 6102 -60 2093 136 0 13 chr10 113377779 113378087 -32211201 - AluJo SINE Alu -8 304 1 21 82 0 0 chr10 113378158 113378207 -32211081 + AT_rich Low_complexity Low_complexity 1 49 0 350 275 58 8 chr10 113378590 113378710 -32210578 + MIR SINE MIR 48 173 -89 1770 129 44 44 chr10 113378887 113379182 -32210106 + AluSx SINE Alu 1 295 -17 292 205 8 102 chr10 113380228 113380355 -32208933 - Charlie8 DNA MER1_type -2247 170 56 227 137 0 20 chr10 113380441 113380492 -32208796 + (CA)n Simple_repeat Simple_repeat 2 51 0 231 247 134 41 chr10 113380660 113380757 -32208531 + L2 LINE L2 3187 3292 -21 2399 92 0 3 chr10 113381767 113382072 -32207216 - AluSc SINE Alu -5 304 1 2239 100 13 3 chr10 113382530 113382829 -32206459 + AluSx SINE Alu 1 302 -10 1053 302 41 14 chr10 113383828 113384242 -32205046 + L1MC/D LINE L1 5380 5804 -2004 2206 86 4 0 chr10 113384432 113384710 -32204578 + AluSp SINE Alu 1 279 -34 243 0 0 0 chr10 113384710 113384737 -32204551 + (TC)n Simple_repeat Simple_repeat 2 28 0 352 210 0 25 chr10 113384747 113384866 -32204422 + (CATA)n Simple_repeat Simple_repeat 2 117 0 843 215 65 72 chr10 113384978 113385271 -32204017 + MLT1G1 LTR MaLR 1 291 -304 2209 128 88 21 chr10 113385273 113385400 -32203888 - L1MB7 LINE L1 -77 6107 5990 2065 120 10 7 chr10 113385400 113385692 -32203596 - AluSx SINE Alu -19 293 1 2209 128 88 21 chr10 113385692 113385995 -32203293 - L1MB7 LINE L1 -194 5990 5648 392 236 34 0 chr10 113387373 113387462 -32201826 - LTR27 LTR ERV1 -109 527 436 880 254 104 42 chr10 113387629 113388031 -32201257 - LTR16C LTR ERVL -1 490 64 732 281 81 39 chr10 113388031 113388466 -32200822 - L2 LINE L2 -13 3300 2848 513 228 88 11 chr10 113388537 113388771 -32200517 - L2 LINE L2 -611 2703 2398 1429 214 132 24 chr10 113388791 113389371 -32199917 - LTR27 LTR ERV1 -2 634 1 878 256 164 11 chr10 113389371 113389731 -32199557 - L2 LINE L2 -928 2386 1972 344 306 115 10 chr10 113389941 113390150 -32199138 - L1ME LINE L1 -302 5819 5589 190 333 0 0 chr10 113391769 113391823 -32197465 + MER5A DNA MER1_type 129 182 -7 2521 122 51 25 chr10 113392344 113392658 -32196630 + LTR56 LTR ERV1 1 330 -115 2500 97 0 0 chr10 113392658 113392968 -32196320 + AluSx SINE Alu 1 310 -2 2521 122 51 25 chr10 113392968 113393087 -32196201 + LTR56 LTR ERV1 330 445 0 530 249 17 75 chr10 113393116 113393357 -32195931 - MER112 DNA MER1_type -15 245 19 196 264 241 0 chr10 113393582 113393669 -32195619 + MIR3 SINE MIR 85 192 -16 726 110 144 0 chr10 113394421 113394539 -32194749 - AluJo SINE Alu -176 136 2 719 238 119 0 chr10 113395570 113395772 -32193516 - MIR SINE MIR -28 234 9 198 333 32 16 chr10 113397612 113397738 -32191550 + MER5B DNA MER1_type 51 178 0 207 252 130 16 chr10 113397740 113397863 -32191425 - MIR3 SINE MIR -50 158 22 201 176 0 0 chr10 113398414 113398448 -32190840 + A-rich Low_complexity Low_complexity 1 34 0 2471 86 0 9 chr10 113398540 113398855 -32190433 - AluSx SINE Alu 0 312 1 274 162 44 0 chr10 113398942 113399010 -32190278 + GA-rich Low_complexity Low_complexity 2 72 0 638 328 43 25 chr10 113399854 113400250 -32189038 + L1MC4a LINE L1 5507 5909 -1899 742 243 77 0 chr10 113400265 113400434 -32188854 + MER20 DNA MER1_type 32 213 -6 1357 197 21 0 chr10 113400580 113400814 -32188474 + MER8 DNA MER2_type 1 239 0 2480 59 14 0 chr10 113402030 113402318 -32186970 - AluY SINE Alu -19 292 1 206 118 0 0 chr10 113403542 113403576 -32185712 + (A)n Simple_repeat Simple_repeat 1 34 0 368 305 109 15 chr10 113404590 113404855 -32184433 + L1MC4a LINE L1 5642 5786 -573 245 217 65 43 chr10 113404923 113405015 -32184273 + HAL1 LINE L1 2381 2474 -33 579 240 33 0 chr10 113405023 113405173 -32184115 - L2 LINE L2 0 3313 3159 1097 120 0 0 chr10 113405544 113405686 -32183602 - AluSq/x SINE Alu -170 142 1 475 213 194 0 chr10 113406068 113406176 -32183112 + FLAM_A SINE Alu 1 129 -13 365 290 60 71 chr10 113406699 113406982 -32182306 + L1MC4a LINE L1 5783 6062 -1746 481 257 28 34 chr10 113407316 113407495 -32181793 - L1M4c LINE L1 -4942 1442 1265 591 261 50 29 chr10 113407511 113407690 -32181598 - MIR SINE MIR -60 148 3 1957 159 27 0 chr10 113408263 113408564 -32180724 + AluJo SINE Alu 1 309 -3 239 181 0 12 chr10 113409538 113409621 -32179667 + CT-rich Low_complexity Low_complexity 1 82 0 842 186 86 23 chr10 113409759 113409979 -32179309 - MIR SINE MIR -27 235 2 726 147 0 0 chr10 113410107 113410216 -32179072 - FLAM_A SINE Alu -13 129 21 425 213 35 155 chr10 113410299 113410557 -32178731 + MIR SINE MIR 33 259 -3 1080 184 57 9 chr10 113411928 113412140 -32177148 + MER58A DNA MER1_type 1 222 -2 1282 199 86 73 chr10 113412249 113412631 -32176657 + MSTD LTR MaLR 8 394 -2 24 38 0 38 chr10 113413158 113413184 -32176104 + AT_rich Low_complexity Low_complexity 1 26 -25 861 153 0 0 chr10 113413184 113413315 -32175973 + FLAM_C SINE Alu 1 131 -2 24 38 0 38 chr10 113413315 113413341 -32175947 + AT_rich Low_complexity Low_complexity 26 51 0 2128 130 3 16 chr10 113415225 113415532 -32173756 + AluJo SINE Alu 1 303 -9 411 243 50 107 chr10 113415720 113415828 -32173460 + L1ME LINE L1 5515 5628 -493 951 137 85 0 chr10 113415828 113415981 -32173307 + FAM SINE Alu 1 166 -9 411 243 50 107 chr10 113415981 113416152 -32173136 + L1ME LINE L1 5628 5778 -343 2342 97 0 0 chr10 113416697 113416995 -32172293 + AluSx SINE Alu 1 298 -14 305 274 81 32 chr10 113417864 113417988 -32171300 + MIR SINE MIR 83 212 -50 182 328 0 15 chr10 113418043 113418110 -32171178 + L2 LINE L2 3199 3264 -8 1116 133 0 0 chr10 113418217 113418397 -32170891 + (TA)n Simple_repeat Simple_repeat 1 180 0 25 0 0 0 chr10 113418937 113418962 -32170326 + AT_rich Low_complexity Low_complexity 1 25 0 638 144 96 32 chr10 113420395 113420520 -32168768 - FLAM_C SINE Alu 0 133 1 258 317 29 0 chr10 113420928 113421032 -32168256 + MLT1J2 LTR MaLR 263 369 -81 316 173 0 19 chr10 113421133 113421185 -32168103 - Alu SINE Alu -250 51 1 375 23 0 0 chr10 113423182 113423226 -32166062 + (TA)n Simple_repeat Simple_repeat 2 45 0 1698 160 80 0 chr10 113423226 113423501 -32165787 - AluJb SINE Alu -13 299 3 1465 274 47 52 chr10 113423657 113424277 -32165011 - MER21B LTR ERV1 -149 714 98 1915 137 30 9 chr10 113424605 113424933 -32164355 - MER1B DNA MER1_type 0 337 3 486 234 0 27 chr10 113425692 113425803 -32163485 - L2 LINE L2 -9 3304 3197 207 0 0 0 chr10 113426109 113426132 -32163156 + (A)n Simple_repeat Simple_repeat 1 23 0 428 222 0 56 chr10 113427152 113427349 -32161939 + (CCCCG)n Simple_repeat Simple_repeat 1 186 0 2187 111 3 13 chr10 113428258 113428564 -32160724 + AluSg SINE Alu 1 303 -7 2373 111 0 13 chr10 113429538 113429854 -32159434 + AluSx SINE Alu 1 312 0 506 287 83 0 chr10 113429970 113430151 -32159137 - L1MC4a LINE L1 -1898 5910 5715 2369 100 0 10 chr10 113430444 113430754 -32158534 - AluSx SINE Alu -5 307 1 21 36 0 0 chr10 113430760 113430788 -32158500 + AT_rich Low_complexity Low_complexity 1 28 0 236 313 60 12 chr10 113430814 113430897 -32158391 - L2 LINE L2 -52 3220 3134 2159 139 0 3 chr10 113431400 113431702 -32157586 + AluSx SINE Alu 1 301 -11 585 144 0 10 chr10 113431719 113431816 -32157472 + AluJo SINE Alu 39 134 -178 2312 101 3 7 chr10 113431855 113432162 -32157126 + AluSq SINE Alu 2 307 -6 2157 128 0 0 chr10 113432247 113432536 -32156752 + AluSx SINE Alu 1 289 -23 2125 131 7 0 chr10 113432864 113433155 -32156133 + AluSx SINE Alu 1 293 -19 24 0 0 0 chr10 113433155 113433179 -32156109 + AT_rich Low_complexity Low_complexity 1 24 0 205 163 41 20 chr10 113434792 113434841 -32154447 + C-rich Low_complexity Low_complexity 5 54 0 285 231 99 91 chr10 113435595 113435716 -32153572 + MIR SINE MIR 23 144 -64 647 160 23 15 chr10 113435769 113435900 -32153388 - FLAM_C SINE Alu -10 133 2 248 139 0 0 chr10 113435908 113435944 -32153344 - Alu SINE Alu -265 36 1 2119 133 6 19 chr10 113435949 113436265 -32153023 - AluSx SINE Alu 0 312 1 2054 154 3 3 chr10 113436271 113436577 -32152711 - AluSx SINE Alu -6 306 1 2093 108 52 0 chr10 113436649 113436936 -32152352 + AluSq SINE Alu 1 302 -11 2300 81 10 7 chr10 113436968 113437275 -32152013 - AluSq SINE Alu -5 308 1 2009 128 10 7 chr10 113437338 113437627 -32151661 + AluSx SINE Alu 6 295 -17 2524 78 0 7 chr10 113438022 113438328 -32150960 + AluSp SINE Alu 1 304 -9 2217 114 0 0 chr10 113438895 113439193 -32150095 + AluSx SINE Alu 1 298 -14 340 188 145 34 chr10 113440086 113440203 -32149085 + MER5A DNA MER1_type 34 163 -26 2289 113 0 0 chr10 113440203 113440496 -32148792 - AluSg SINE Alu -17 293 1 208 268 115 57 chr10 113440496 113440536 -32148752 - MER5A DNA MER1_type -152 37 1 183 188 0 0 chr10 113440563 113440595 -32148693 + MIR SINE MIR 112 143 -65 2556 60 3 3 chr10 113440634 113440935 -32148353 - AluSp SINE Alu -12 301 1 2371 99 0 0 chr10 113440986 113441279 -32148009 + AluSx SINE Alu 7 299 -13 25 0 0 0 chr10 113442195 113442220 -32147068 + AT_rich Low_complexity Low_complexity 1 25 0 1561 100 168 4 chr10 113442220 113442470 -32146818 + AluSc SINE Alu 1 291 -8 679 178 0 8 chr10 113442470 113442588 -32146700 - AluJo/FLAM SINE Alu -194 118 2 767 134 7 35 chr10 113442628 113442770 -32146518 + L1MB5 LINE L1 6004 6141 -33 756 61 0 0 chr10 113442772 113442870 -32146418 + (TTCC)n Simple_repeat Simple_repeat 4 101 0 297 97 11 12 chr10 113442870 113442944 -32146344 + AluSp/q SINE Alu 160 300 -3 2429 77 3 26 chr10 113442944 113443255 -32146033 + AluSp SINE Alu 1 304 -9 1643 169 46 14 chr10 113443545 113443693 -32145595 - AluJb SINE Alu -19 293 151 2047 93 32 11 chr10 113443693 113444000 -32145288 - AluSc SINE Alu 0 309 1 1643 169 46 14 chr10 113444000 113444135 -32145153 - AluJb SINE Alu -161 151 1 624 214 56 0 chr10 113444135 113444261 -32145027 - AluJo SINE Alu -177 135 3 183 80 0 0 chr10 113444288 113444313 -32144975 + (TTCA)n Simple_repeat Simple_repeat 2 26 0 399 329 67 51 chr10 113444313 113444568 -32144720 - L2 LINE L2 0 3272 3014 873 90 37 22 chr10 113445461 113445595 -32143693 + AluSq/x SINE Alu 1 136 -177 2451 80 3 6 chr10 113445595 113445907 -32143381 + AluY SINE Alu 1 311 0 24 0 0 0 chr10 113446122 113446146 -32143142 + AT_rich Low_complexity Low_complexity 1 24 0 594 157 19 19 chr10 113450518 113450626 -32138662 + FLAM_A SINE Alu 21 128 -14 182 264 14 83 chr10 113450638 113450710 -32138578 + MIR3 SINE MIR 113 179 -29 187 212 106 30 chr10 113450851 113450917 -32138371 - MER5A DNA MER1_type -56 133 63 314 44 132 0 chr10 113451893 113451961 -32137327 + GA-rich Low_complexity Low_complexity 4 80 0 191 61 30 0 chr10 113452592 113452625 -32136663 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 512 229 9 0 chr10 113452722 113452827 -32136461 + MIR SINE MIR 48 153 -109 1455 149 24 92 chr10 113453029 113453142 -32136146 + AluSx SINE Alu 1 120 -192 279 0 0 0 chr10 113453142 113453173 -32136115 + (TAAA)n Simple_repeat Simple_repeat 4 34 0 1455 149 24 92 chr10 113453173 113453394 -32135894 + AluSx SINE Alu 120 312 0 2141 139 3 3 chr10 113453409 113453719 -32135569 + AluSx SINE Alu 1 310 -2 2048 117 43 0 chr10 113453816 113454097 -32135191 + AluSx SINE Alu 1 293 -19 2325 95 3 3 chr10 113454717 113455012 -32134276 + AluSq SINE Alu 1 295 -18 258 246 0 0 chr10 113455019 113455076 -32134212 + (CA)n Simple_repeat Simple_repeat 1 57 0 1289 111 6 0 chr10 113455163 113455334 -32133954 - AluSg/x SINE Alu -13 299 128 2324 109 0 0 chr10 113455337 113455639 -32133649 - AluSg SINE Alu -8 302 1 676 188 0 8 chr10 113455715 113455843 -32133445 + FLAM_A SINE Alu 11 137 -5 501 147 17 60 chr10 113455852 113455968 -32133320 + L1M4 LINE L1 4974 5084 -1062 585 159 0 0 chr10 113455968 113456075 -32133213 - AluSc SINE Alu -9 300 194 240 302 21 0 chr10 113456208 113456304 -32132984 + L1M4 LINE L1 4992 5089 -1057 2136 106 7 0 chr10 113456318 113456600 -32132688 - AluSx SINE Alu -28 284 1 2978 143 57 25 chr10 113456601 113456630 -32132658 + L1MB7 LINE L1 5556 5583 -601 2062 128 0 53 chr10 113456630 113456950 -32132338 + AluSx SINE Alu 1 303 -9 2978 143 57 25 chr10 113456950 113457520 -32131768 + L1MB7 LINE L1 5583 6174 -10 430 143 0 12 chr10 113457524 113457608 -32131680 + L1ME1 LINE L1 6084 6166 0 2475 92 0 0 chr10 113457646 113457951 -32131337 + AluSq SINE Alu 1 305 -8 2305 98 0 0 chr10 113458248 113458555 -32130733 - AluSq SINE Alu 0 307 1 192 77 0 0 chr10 113458563 113458589 -32130699 + (TTA)n Simple_repeat Simple_repeat 2 27 0 3134 167 25 38 chr10 113458589 113458837 -32130451 - L1MB2 LINE L1 -11 6160 5910 2397 96 3 6 chr10 113458837 113459151 -32130137 - AluSq SINE Alu 0 313 1 2460 89 0 7 chr10 113459156 113459459 -32129829 - AluSg SINE Alu -9 301 1 3134 167 25 38 chr10 113459459 113459855 -32129433 - L1MB2 LINE L1 -265 5906 5519 318 225 45 0 chr10 113460098 113460187 -32129101 - MIR SINE MIR -56 206 114 241 267 47 35 chr10 113460219 113460305 -32128983 + MIR3 SINE MIR 84 170 -38 2256 100 13 29 chr10 113460886 113461196 -32128092 + AluSx SINE Alu 1 305 -7 394 280 125 36 chr10 113461357 113461636 -32127652 + L2 LINE L2 2932 3235 -78 1713 168 29 39 chr10 113461667 113461977 -32127311 - AluJb SINE Alu -5 307 1 26 30 0 0 chr10 113462038 113462071 -32127217 + AT_rich Low_complexity Low_complexity 1 33 0 718 222 125 0 chr10 113462071 113462247 -32127041 - MIR SINE MIR -14 248 51 2829 26 0 0 chr10 113462252 113462562 -32126726 - AluYb8 SINE Alu -8 310 1 2261 117 0 10 chr10 113462564 113462864 -32126424 - AluSx SINE Alu -14 298 2 1378 146 42 74 chr10 113462890 113462918 -32126370 - Charlie5 DNA MER1_type -1 2623 2596 2274 114 3 0 chr10 113462918 113463217 -32126071 + AluSx SINE Alu 1 300 -12 1378 146 42 74 chr10 113463217 113463323 -32125965 - Charlie5 DNA MER1_type -28 2596 2488 2334 66 3 11 chr10 113463323 113463638 -32125650 + AluSp SINE Alu 1 313 0 1378 146 42 74 chr10 113463638 113463768 -32125520 - Charlie5 DNA MER1_type -136 2488 2372 2381 72 20 0 chr10 113463768 113463949 -32125339 - AluY SINE Alu 0 311 120 351 0 0 0 chr10 113463949 113463988 -32125300 + (TG)n Simple_repeat Simple_repeat 2 40 0 2381 72 20 0 chr10 113463988 113464110 -32125178 - AluY SINE Alu -191 120 2 1378 146 42 74 chr10 113464110 113464245 -32125043 - Charlie5 DNA MER1_type -252 2372 2234 2326 90 0 0 chr10 113464246 113464535 -32124753 - AluSg SINE Alu -9 301 13 486 193 28 0 chr10 113464593 113464608 -32124680 - MER3 DNA MER1_type 5 167 154 2541 41 0 3 chr10 113464608 113464898 -32124390 - AluY SINE Alu -22 289 1 486 193 28 0 chr10 113464898 113464991 -32124297 - MER3 DNA MER1_type -8 154 56 608 187 7 90 chr10 113465413 113465568 -32123720 + MIR SINE MIR 8 149 -113 766 152 0 43 chr10 113465690 113465828 -32123460 + FLAM_A SINE Alu 1 132 -1 2373 93 3 0 chr10 113466127 113466428 -32122860 + AluSp SINE Alu 1 302 -11 234 313 150 12 chr10 113466879 113467039 -32122249 + L2 LINE L2 3121 3302 -11 339 25 0 0 chr10 113467573 113467613 -32121675 + (TG)n Simple_repeat Simple_repeat 2 41 0 2537 67 0 19 chr10 113467741 113468055 -32121233 - AluSx SINE Alu -4 308 1 905 169 65 0 chr10 113468181 113468335 -32120953 - AluJb SINE Alu -20 292 129 222 163 20 20 chr10 113468424 113468473 -32120815 + GA-rich Low_complexity Low_complexity 2 50 0 231 342 179 0 chr10 113468619 113468736 -32120552 + MIR SINE MIR 51 188 -74 865 242 55 0 chr10 113468785 113469005 -32120283 + MIR SINE MIR 8 238 -24 1988 140 14 0 chr10 113469110 113469389 -32119899 + AluSq SINE Alu 16 298 -15 475 290 125 32 chr10 113470064 113470471 -32118817 + MLT1K LTR MaLR 137 581 -7 2504 63 6 13 chr10 113470487 113470802 -32118486 - AluSp SINE Alu 0 313 1 2418 82 10 0 chr10 113470865 113471169 -32118119 + AluSp SINE Alu 3 309 -4 872 91 8 0 chr10 113471233 113471365 -32117923 - FLAM_C SINE Alu 0 133 1 334 254 63 56 chr10 113471660 113471802 -32117486 + MIR SINE MIR 100 242 -20 291 198 119 40 chr10 113573442 113573543 -32015745 + L1MC5 LINE L1 7806 7914 -47 424 218 105 8 chr10 113573551 113573684 -32015604 + MER53 DNA DNA 1 146 -43 435 187 93 9 chr10 113573753 113573860 -32015428 + MER53 DNA DNA 73 188 -1 319 292 47 76 chr10 113573934 113574105 -32015183 + MER5A DNA MER1_type 1 166 -23 1645 198 3 7 chr10 113574401 113574709 -32014579 - AluJo SINE Alu -5 307 1 257 302 23 0 chr10 113574800 113574886 -32014402 - MER81 DNA DNA 0 114 27 629 275 58 14 chr10 113575306 113575513 -32013775 + LTR16A LTR ERVL 235 450 0 1899 287 93 48 chr10 113575637 113575912 -32013376 + HERV16 LTR ERVL 152 413 -4726 1962 141 0 3 chr10 113575912 113576209 -32013079 + AluJb SINE Alu 1 296 -16 1899 287 93 48 chr10 113576209 113576667 -32012621 + HERV16 LTR ERVL 413 849 -4290 2235 129 43 83 chr10 113576667 113577087 -32012201 + MER57A LTR ERV1 1 403 0 1899 287 93 48 chr10 113577087 113577677 -32011611 + HERV16 LTR ERVL 849 3208 -1931 1822 111 24 0 chr10 113577721 113577973 -32011315 - AluSp SINE Alu -16 297 40 5355 81 1 54 chr10 113578304 113579057 -32010231 - L1PA13 LINE L1 -1 6162 5450 2296 135 16 0 chr10 113579059 113579511 -32009777 + L1PA13 LINE L1 4986 5442 -719 954 187 0 0 chr10 113579536 113579686 -32009602 + FRAM SINE Alu 1 150 -16 249 98 0 0 chr10 113579686 113579727 -32009561 + (CATA)n Simple_repeat Simple_repeat 2 42 0 605 231 65 46 chr10 113580082 113580342 -32008946 - MER97c DNA MER1_type? 0 1090 826 1668 160 0 0 chr10 113580549 113580812 -32008476 + AluJb SINE Alu 25 287 -25 8491 193 50 26 chr10 113580824 113581063 -32008225 - L1MC3 LINE L1 -27 7758 7526 2224 101 0 7 chr10 113581063 113581359 -32007929 - AluY SINE Alu -13 298 5 8491 193 50 26 chr10 113581359 113583056 -32006232 - L1MC3 LINE L1 -259 7526 5775 1112 276 84 41 chr10 113583256 113583694 -32005594 + L1MC4a LINE L1 5344 5813 -1995 2227 98 17 7 chr10 113583694 113583991 -32005297 + AluSq SINE Alu 1 300 -13 1112 276 84 41 chr10 113583991 113584110 -32005178 + L1MC4a LINE L1 5813 5925 -1883 24 32 0 0 chr10 113584293 113584324 -32004964 + AT_rich Low_complexity Low_complexity 1 31 0 2340 89 6 16 chr10 113584544 113584860 -32004428 - AluSp SINE Alu 0 313 1 378 280 57 62 chr10 113585082 113585293 -32003995 + L2 LINE L2 3044 3253 -60 195 241 63 76 chr10 113585947 113586026 -32003262 + L2 LINE L2 3180 3257 -15 2233 111 0 0 chr10 113586040 113586329 -32002959 - AluSx SINE Alu -23 289 1 778 252 86 36 chr10 113586578 113586880 -32002408 + MLT1J1 LTR MaLR 1 317 -129 1101 270 98 43 chr10 113586880 113587410 -32001878 - L1MC3 LINE L1 -743 5403 4935 195 42 0 0 chr10 113587410 113587434 -32001854 + (TG)n Simple_repeat Simple_repeat 1 24 0 1101 270 98 43 chr10 113587434 113587806 -32001482 - L1MC3 LINE L1 -1211 4935 4585 266 254 0 0 chr10 113587870 113587929 -32001359 - L1P LINE L1 -1801 4345 4287 231 214 92 41 chr10 113588037 113588135 -32001153 - L1MC3 LINE L1 -2024 4122 4020 295 279 8 78 chr10 113588161 113588290 -32000998 + MIR SINE MIR 102 221 -41 332 250 12 0 chr10 113588329 113588409 -32000879 + L2 LINE L2 3230 3310 -3 185 300 20 0 chr10 113588643 113588693 -32000595 - MIR SINE MIR -142 120 70 283 314 161 0 chr10 113589556 113589674 -31999614 - L2 LINE L2 0 3272 3136 189 254 0 0 chr10 113589702 113589773 -31999515 + (CA)n Simple_repeat Simple_repeat 2 72 0 251 143 0 36 chr10 113589857 113589913 -31999375 + (CATA)n Simple_repeat Simple_repeat 4 57 0 632 223 37 15 chr10 113590064 113590257 -31999031 + MIR SINE MIR 32 221 -41 1427 145 133 0 chr10 113590269 113590539 -31998749 - AluJo SINE Alu 0 303 1 276 271 83 15 chr10 113591029 113591162 -31998126 + L1MC/D LINE L1 5331 5472 -2336 2192 104 0 29 chr10 113591170 113591477 -31997811 + AluSx SINE Alu 1 298 -14 820 224 0 25 chr10 113591560 113591721 -31997567 - AluJb SINE Alu -25 287 131 2336 202 58 94 chr10 113591997 113592838 -31996450 + L1ME1 LINE L1 4475 5285 -861 3003 218 38 25 chr10 113592973 113593684 -31995604 + L1ME1 LINE L1 5300 6019 -147 331 244 24 12 chr10 113593746 113593828 -31995460 - L1ME1 LINE L1 -147 6019 5937 882 276 25 8 chr10 113595379 113595622 -31993666 + LTR16A LTR ERVL 108 354 -96 2180 128 0 3 chr10 113595765 113596062 -31993226 + AluSx SINE Alu 1 296 -16 711 291 58 41 chr10 113596085 113596660 -31992628 - L1ME4a LINE L1 -89 6032 5446 2288 140 97 20 chr10 113596677 113597078 -31992210 + MSTB1 LTR MaLR 1 432 0 284 233 55 0 chr10 113597215 113597288 -31992000 - MER91A DNA MER1_type -119 77 1 572 241 79 100 chr10 113597744 113597985 -31991303 + MIR SINE MIR 23 258 -4 322 382 99 14 chr10 113598336 113598548 -31990740 + L2 LINE L2 3043 3272 0 21 0 0 0 chr10 113599192 113599213 -31990075 + AT_rich Low_complexity Low_complexity 1 21 0 315 250 171 29 chr10 113599822 113599962 -31989326 - MER103 DNA DNA -2 164 5 1655 252 84 18 chr10 113600000 113600488 -31988800 - MLT1G1 LTR MaLR 0 595 76 229 262 48 36 chr10 113600590 113600674 -31988614 - L1ME3A LINE L1 -138 6032 5948 826 139 66 7 chr10 113600684 113600821 -31988467 - MER20 DNA MER1_type -36 183 39 439 35 0 0 chr10 113600831 113600888 -31988400 + L1PA3 LINE L1 6099 6155 0 307 250 93 56 chr10 113600928 113601036 -31988252 + L2 LINE L2 3200 3311 -2 203 242 15 15 chr10 113601360 113601426 -31987862 + (CCCG)n Simple_repeat Simple_repeat 4 69 0 459 206 149 0 chr10 113601825 113601966 -31987322 + MIR SINE MIR 84 245 -17 2295 66 30 3 chr10 113602058 113602360 -31986928 - AluY SINE Alu -1 310 1 314 291 120 0 chr10 113602571 113602688 -31986600 + L2 LINE L2 3142 3272 0 261 162 73 0 chr10 113602846 113602914 -31986374 - L1MA10 LINE L1 0 6334 6262 812 43 0 0 chr10 113602936 113603030 -31986258 - L1PA7 LINE L1 -2 6152 6059 228 267 0 0 chr10 113603030 113603090 -31986198 - L1ME2 LINE L1 -50 6114 6055 24 0 0 0 chr10 113603127 113603151 -31986137 + AT_rich Low_complexity Low_complexity 1 24 0 526 210 70 7 chr10 113603316 113603459 -31985829 - L1ME3A LINE L1 -359 5762 5611 1630 161 38 17 chr10 113603537 113603829 -31985459 + AluJo SINE Alu 1 298 -14 389 211 102 16 chr10 113603971 113604099 -31985189 + L1MA10 LINE L1 6194 6332 -2 2204 118 3 0 chr10 113604150 113604456 -31984832 + AluSx SINE Alu 1 307 -5 363 132 0 29 chr10 113604631 113604699 -31984589 + L1MB8 LINE L1 6113 6178 0 327 130 0 0 chr10 113604729 113604783 -31984505 + (TA)n Simple_repeat Simple_repeat 1 54 0 2022 128 3 3 chr10 113604783 113605071 -31984217 - AluSx SINE Alu -24 288 1 732 268 23 54 chr10 113605108 113605434 -31983854 - L1MC4a LINE L1 -302 5819 5557 395 221 13 0 chr10 113605436 113605513 -31983775 + AluJ/FLAM SINE Alu 1 78 -224 1916 227 104 16 chr10 113605926 113606424 -31982864 - MER34 LTR ERV1 0 542 1 888 81 89 0 chr10 113606434 113606558 -31982730 - MER85 DNA T2_type -4 135 1 567 209 101 19 chr10 113606620 113606778 -31982510 + MIR SINE MIR 28 198 -64 508 231 92 116 chr10 113606780 113607031 -31982257 - MIR SINE MIR 0 262 18 215 247 32 65 chr10 113607013 113607106 -31982182 + L2 LINE L2 3173 3262 -10 * 1672 178 47 0 chr10 113607129 113607519 -31981769 + L1MC/D LINE L1 5186 5590 -743 2208 110 7 0 chr10 113607519 113607827 -31981461 - AluSx SINE Alu -2 310 1 185 308 0 19 chr10 113607827 113607879 -31981409 + L3 LINE CR1 1526 1576 -1 257 265 0 12 chr10 113608330 113608413 -31980875 + L1M4 LINE L1 5098 5179 -967 2015 120 0 23 chr10 113608564 113608864 -31980424 + AluSc SINE Alu 1 293 -16 1335 136 19 0 chr10 113609513 113609727 -31979561 - L1MB3 LINE L1 -7 6176 5959 311 279 80 40 chr10 113610299 113610525 -31978763 + L1M4b LINE L1 11 245 -6614 1751 241 40 32 chr10 113610632 113610703 -31978585 + L1M4b LINE L1 2514 2583 -4374 2516 75 3 0 chr10 113610703 113611010 -31978278 - AluSp SINE Alu -5 308 1 1751 241 40 32 chr10 113611010 113611779 -31977509 + L1M4b LINE L1 2583 3310 -3647 1100 300 97 80 chr10 113612198 113613440 -31975848 - L2 LINE L2 -413 2901 1638 1886 171 0 13 chr10 113613680 113613984 -31975304 - AluJo SINE Alu -12 300 1 351 277 128 42 chr10 113614228 113614492 -31974796 + L2 LINE L2 2754 3041 -272 402 223 54 88 chr10 113614504 113614652 -31974636 + L2 LINE L2 3171 3313 0 222 167 212 0 chr10 113614714 113614780 -31974508 - MIR SINE MIR 0 262 183 2412 161 49 63 chr10 113615061 113615421 -31973867 - MER67A LTR ERV1 0 543 192 533 16 0 0 chr10 113615421 113615483 -31973805 - L1PA6 LINE L1 -1 6153 6092 2412 161 49 63 chr10 113615483 113615673 -31973615 - MER67A LTR ERV1 -351 192 1 202 139 28 0 chr10 113615783 113615819 -31973469 - MIR3 SINE MIR -42 166 130 2113 108 3 20 chr10 113616572 113616878 -31972410 - AluSg SINE Alu -9 301 1 325 276 130 58 chr10 113617778 113618122 -31971166 - L1M2 LINE L1 -5721 1128 736 207 0 0 0 chr10 113619004 113619027 -31970261 + (T)n Simple_repeat Simple_repeat 1 23 0 500 234 0 27 chr10 113619333 113619444 -31969844 + L2 LINE L2 3197 3304 -9 2128 137 30 9 chr10 113620203 113620531 -31968757 + MER1B DNA MER1_type 3 337 0 1517 248 60 65 chr10 113620859 113621479 -31967809 + MER21B LTR ERV1 98 714 -149 1648 156 80 0 chr10 113621635 113621910 -31967378 + AluJb SINE Alu 3 299 -13 305 47 23 0 chr10 113621910 113621953 -31967335 + (TA)n Simple_repeat Simple_repeat 2 45 0 247 151 0 17 chr10 113623950 113624052 -31965236 + Alu SINE Alu 1 155 -11 254 317 29 0 chr10 113624103 113624207 -31965081 - MLT1J2 LTR MaLR -81 369 263 686 144 96 32 chr10 113624615 113624740 -31964548 + FLAM_C SINE Alu 1 133 0 25 0 0 0 chr10 113626173 113626198 -31963090 + AT_rich Low_complexity Low_complexity 1 25 0 1116 133 0 0 chr10 113626738 113626918 -31962370 + (TA)n Simple_repeat Simple_repeat 1 180 0 208 328 0 15 chr10 113627025 113627092 -31962196 - L2 LINE L2 -8 3264 3199 352 275 124 23 chr10 113627147 113627319 -31961969 - MIR SINE MIR -50 212 23 2305 97 0 0 chr10 113628140 113628438 -31960850 - AluSx SINE Alu -14 298 1 408 243 50 107 chr10 113628983 113629154 -31960134 - L1ME LINE L1 -343 5778 5628 930 137 85 0 chr10 113629154 113629307 -31959981 - FAM SINE Alu -9 166 1 408 243 50 107 chr10 113629307 113629415 -31959873 - L1ME LINE L1 -493 5628 5515 303 230 42 105 chr10 113629432 113629603 -31959685 - L1ME LINE L1 -741 5443 5284 2096 130 3 16 chr10 113629603 113629910 -31959378 - AluJo SINE Alu -9 303 1 303 230 42 105 chr10 113629910 113629929 -31959359 - L1ME LINE L1 -900 5284 5265 24 38 0 38 chr10 113631794 113631820 -31957468 + AT_rich Low_complexity Low_complexity 1 26 -25 858 153 0 0 chr10 113631820 113631951 -31957337 - FLAM_C SINE Alu -2 131 1 24 38 0 38 chr10 113631951 113631977 -31957311 + AT_rich Low_complexity Low_complexity 26 51 0 1262 199 86 73 chr10 113632504 113632886 -31956402 - MSTD LTR MaLR -2 394 8 1067 184 57 9 chr10 113632995 113633207 -31956081 - MER58A DNA MER1_type -2 222 1 506 246 31 138 chr10 113634578 113634867 -31954421 - MIR SINE MIR -3 259 2 720 161 0 0 chr10 113634916 113635028 -31954260 + FLAM_A SINE Alu 18 129 -13 908 186 86 23 chr10 113635156 113635376 -31953912 + MIR SINE MIR 2 235 -27 239 181 0 12 chr10 113635514 113635597 -31953691 + GA-rich Low_complexity Low_complexity 1 82 0 1928 159 27 0 chr10 113636571 113636872 -31952416 - AluJo SINE Alu -3 309 1 619 261 50 29 chr10 113637445 113637624 -31951664 + MIR SINE MIR 3 183 -60 466 257 28 34 chr10 113637640 113637819 -31951469 + L1M4c LINE L1 1265 1442 -4942 245 287 77 33 chr10 113638251 113638432 -31950856 - L1MC4a LINE L1 -1833 5975 5787 467 198 198 0 chr10 113638961 113639067 -31950221 - FLAM_A SINE Alu -15 127 1 1368 236 131 38 chr10 113639329 113639518 -31949770 + L1ME3A LINE L1 5318 5488 -682 2574 37 0 0 chr10 113639518 113639813 -31949475 - AluY SINE Alu -15 296 2 1368 236 131 38 chr10 113639813 113640203 -31949085 + L1ME3A LINE L1 5488 5951 -219 186 226 75 0 chr10 113640328 113640381 -31948907 + L3b LINE CR1 1346 1402 -181 2061 94 14 7 chr10 113640638 113640960 -31948328 + AluSx SINE Alu 6 312 0 1183 144 77 22 chr10 113641173 113641395 -31947893 + MER46A DNA MER2_type 2 235 -1 23 33 0 0 chr10 113641621 113641651 -31947637 + AT_rich Low_complexity Low_complexity 1 30 0 377 259 227 16 chr10 113642034 113642219 -31947069 - MIR SINE MIR -27 235 12 909 143 0 0 chr10 113642439 113642565 -31946723 - AluJb SINE Alu -186 126 1 21 0 0 0 chr10 113642565 113642586 -31946702 + AT_rich Low_complexity Low_complexity 1 21 0 1045 202 161 50 chr10 113642602 113642944 -31946344 - L1MC4a LINE L1 -460 5702 5323 918 260 38 28 chr10 113642965 113643253 -31946035 - L1ME1 LINE L1 -9 6157 5867 816 148 216 17 chr10 113643253 113643429 -31945859 - MER20 DNA MER1_type 0 219 9 22 35 0 0 chr10 113643582 113643611 -31945677 + AT_rich Low_complexity Low_complexity 1 29 0 1629 179 14 14 chr10 113643690 113643975 -31945313 + AluJo SINE Alu 1 285 -27 324 336 54 7 chr10 113644001 113644150 -31945138 - L1 LINE L1 -1672 4474 4319 192 152 0 0 chr10 113644333 113644366 -31944922 + (TCCA)n Simple_repeat Simple_repeat 4 36 0 21 0 0 0 chr10 113644513 113644534 -31944754 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr10 113645362 113645388 -31943900 + AT_rich Low_complexity Low_complexity 1 26 0 2050 117 0 3 chr10 113645388 113645678 -31943610 - AluSx SINE Alu -23 289 1 1260 257 64 15 chr10 113645973 113646490 -31942798 - L1ME1 LINE L1 -743 5403 4876 232 137 98 0 chr10 113646647 113646698 -31942590 - L1MB3 LINE L1 -1 6182 6127 4093 192 39 12 chr10 113646709 113647551 -31941737 - L1MB3 LINE L1 -32 6151 5333 216 0 0 0 chr10 113647551 113647575 -31941713 + (TTG)n Simple_repeat Simple_repeat 1 24 0 4093 192 39 12 chr10 113647575 113648465 -31940823 - L1MB3 LINE L1 -850 5333 4371 982 244 19 5 chr10 113648968 113649173 -31940115 - MER82 DNA MER2_type 0 653 446 352 333 42 16 chr10 113649207 113649399 -31939889 + MIR SINE MIR 2 198 -64 533 198 0 0 chr10 113649430 113649521 -31939767 - MER82 DNA MER2_type -561 92 2 273 201 157 113 chr10 113649687 113649800 -31939488 + MIR SINE MIR 59 182 -80 2122 205 186 32 chr10 113649800 113650489 -31938799 + LTR50 LTR ERVL 1 795 0 273 201 157 113 chr10 113650489 113650534 -31938754 + MIR SINE MIR 182 224 -38 603 284 65 55 chr10 113650686 113650780 -31938508 + L2 LINE L2 3019 3111 -202 1830 156 3 3 chr10 113650780 113651075 -31938213 - AluSx SINE Alu -17 295 1 603 284 65 55 chr10 113651075 113651272 -31938016 + L2 LINE L2 3111 3313 0 1930 117 73 3 chr10 113651334 113651651 -31937637 + MER44D DNA MER2_type 1 609 0 180 0 0 0 chr10 113651969 113651989 -31937299 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 23 0 0 0 chr10 113652061 113652084 -31937204 + AT_rich Low_complexity Low_complexity 1 23 0 3379 141 2 35 chr10 113652450 113652995 -31936293 - MER1A DNA MER1_type 0 527 1 2308 108 3 0 chr10 113653030 113653337 -31935951 - AluSg SINE Alu -2 308 1 444 280 42 26 chr10 113653726 113653919 -31935369 - L1ME LINE L1 -298 5823 5628 1706 235 102 14 chr10 113654233 113654731 -31934557 - MER34 LTR ERV1 0 542 1 823 81 89 0 chr10 113654741 113654865 -31934423 - MER85 DNA T2_type -4 135 1 580 215 98 18 chr10 113654922 113655085 -31934203 + MIR SINE MIR 23 198 -64 532 231 92 116 chr10 113655087 113655338 -31933950 - MIR SINE MIR 0 262 18 215 273 34 45 chr10 113655320 113655408 -31933880 + L2 LINE L2 3173 3259 -13 * 5406 151 47 21 chr10 113655436 113655822 -31933466 + L1MC1 LINE L1 5186 5560 -773 2611 59 0 0 chr10 113655822 113656129 -31933159 - AluY SINE Alu -4 307 1 5406 151 47 21 chr10 113656129 113656835 -31932453 + L1MC1 LINE L1 5560 6305 -28 412 106 30 0 chr10 113656836 113656902 -31932386 - L1M4 LINE L1 -893 5253 5186 29 70 0 0 chr10 113656931 113656988 -31932300 + AT_rich Low_complexity Low_complexity 1 57 0 23 54 0 0 chr10 113657502 113657539 -31931749 + AT_rich Low_complexity Low_complexity 1 37 0 330 237 148 9 chr10 113657868 113658014 -31931274 + MIR3 SINE MIR 6 165 -63 27 49 0 0 chr10 113658131 113658172 -31931116 + AT_rich Low_complexity Low_complexity 1 41 0 1451 183 7 22 chr10 113660252 113660526 -31928762 - AluJo SINE Alu -8 304 35 291 240 82 61 chr10 113660536 113660732 -31928556 - L1ME3 LINE L1 -2 6160 5961 1000 184 14 19 chr10 113660898 113661105 -31928183 + MER106A DNA MER1_type 13 218 -18 1141 203 142 107 chr10 113661129 113661777 -31927511 - L1MC5 LINE L1 -518 7443 6720 2142 133 7 0 chr10 113661777 113662085 -31927203 - AluSx SINE Alu 0 312 3 1141 203 142 107 chr10 113662085 113662339 -31926949 - L1MC5 LINE L1 -1241 6720 6476 490 308 65 8 chr10 113662485 113662732 -31926556 - HAL1b LINE L1 -770 578 318 2501 58 10 0 chr10 113662748 113663056 -31926232 - AluY SINE Alu 0 311 1 4022 166 15 4 chr10 113663262 113663993 -31925295 - L1MB3 LINE L1 -2 6181 5443 224 209 0 0 chr10 113664526 113664569 -31924719 - MIR SINE MIR 0 262 220 2379 109 0 3 chr10 113667137 113667448 -31921840 + AluSx SINE Alu 1 310 -2 21 36 0 0 chr10 113667475 113667503 -31921785 + AT_rich Low_complexity Low_complexity 1 28 0 211 271 0 0 chr10 113667868 113667927 -31921361 + GA-rich Low_complexity Low_complexity 1 59 0 2012 108 43 0 chr10 113668099 113668377 -31920911 - AluSx SINE Alu -22 290 1 253 316 0 51 chr10 113670416 113670514 -31918774 - MER5A DNA MER1_type -95 94 2 216 333 31 70 chr10 113671390 113671519 -31917769 + MER5A DNA MER1_type 18 141 -48 28 0 0 0 chr10 113673501 113673529 -31915759 + AT_rich Low_complexity Low_complexity 1 28 0 2060 147 0 6 chr10 113673685 113673998 -31915290 + AluSx SINE Alu 1 311 -1 1673 167 59 3 chr10 113674012 113674130 -31915158 + AluJb SINE Alu 3 113 -199 288 53 0 0 chr10 113674130 113674168 -31915120 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 1673 167 59 3 chr10 113674168 113674336 -31914952 + AluJb SINE Alu 113 305 -7 341 257 18 71 chr10 113674840 113674953 -31914335 - MIR SINE MIR -71 191 85 2283 77 0 3 chr10 113677921 113678221 -31911067 - AluSc SINE Alu -10 299 1 26 0 0 0 chr10 113678559 113678585 -31910703 + AT_rich Low_complexity Low_complexity 1 26 0 21 57 0 0 chr10 113678671 113678706 -31910582 + AT_rich Low_complexity Low_complexity 1 35 0 971 262 25 13 chr10 113678823 113679060 -31910228 - MIR SINE MIR -21 241 2 319 211 70 0 chr10 113679828 113679899 -31909389 - MIR3 SINE MIR -48 160 85 447 272 92 8 chr10 113680242 113680413 -31908875 - MIR3 SINE MIR -65 143 9 602 318 132 26 chr10 113681487 113681905 -31907383 - L3 LINE CR1 -62 1515 1054 221 289 79 44 chr10 113681929 113682043 -31907245 + L2 LINE L2 3188 3305 -8 252 258 167 8 chr10 113682174 113682294 -31906994 - L3 LINE CR1 -700 877 739 2342 73 0 3 chr10 113682398 113682698 -31906590 + AluY SINE Alu 1 299 -12 239 125 0 0 chr10 113683512 113683552 -31905736 + L2 LINE L2 3270 3309 -4 2029 135 0 0 chr10 113683844 113684140 -31905148 - AluSx SINE Alu -15 297 2 1518 149 53 46 chr10 113685631 113685933 -31903355 - AluJo SINE Alu -8 304 1 298 303 35 127 chr10 113688164 113688504 -31900784 - L2 LINE L2 -31 3241 2933 188 65 0 32 chr10 113688578 113688609 -31900679 + (GGAA)n Simple_repeat Simple_repeat 4 33 0 2077 124 0 0 chr10 113688971 113689269 -31900019 - AluSx SINE Alu -14 298 1 316 299 198 18 chr10 113689707 113689924 -31899364 + MIR SINE MIR 7 262 0 435 285 109 52 chr10 113689996 113690263 -31899025 + L2 LINE L2 3025 3306 -7 212 309 162 56 chr10 113690467 113691018 -31898270 + L2 LINE L2 2442 3049 -223 1026 210 62 33 chr10 113691121 113691393 -31897895 - MLT1A1 LTR MaLR -82 283 4 197 227 227 93 chr10 113691582 113691798 -31897490 - MIR SINE MIR 0 262 18 212 0 36 0 chr10 113692208 113692236 -31897052 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 21 36 0 0 chr10 113693108 113693136 -31896152 + AT_rich Low_complexity Low_complexity 1 28 0 188 111 28 0 chr10 113693723 113693759 -31895529 + (TA)n Simple_repeat Simple_repeat 1 37 0 23 0 0 0 chr10 113694915 113694938 -31894350 + AT_rich Low_complexity Low_complexity 1 23 0 1891 116 40 7 chr10 113696601 113696902 -31892386 - AluSq SINE Alu -2 311 1 351 247 0 0 chr10 113702140 113702314 -31886974 + (TG)n Simple_repeat Simple_repeat 1 174 0 570 220 0 0 chr10 113702346 113702604 -31886684 + (TG)n Simple_repeat Simple_repeat 1 258 0 182 250 56 42 chr10 113704254 113704326 -31884962 - MIR3 SINE MIR -24 184 112 519 45 0 0 chr10 113704577 113704643 -31884645 + (CA)n Simple_repeat Simple_repeat 2 67 0 208 69 0 0 chr10 113705509 113705538 -31883750 + L2 LINE L2 3027 3055 -217 335 125 0 16 chr10 113706128 113706192 -31883096 + (CA)n Simple_repeat Simple_repeat 1 63 0 222 259 37 0 chr10 113706823 113706877 -31882411 + L2 LINE L2 3250 3305 -8 963 121 0 0 chr10 113706880 113707029 -31882259 + (TGGA)n Simple_repeat Simple_repeat 1 149 0 676 280 34 0 chr10 113708155 113708362 -31880926 + MIR SINE MIR 28 241 -21 24 0 0 0 chr10 113709163 113709187 -31880101 + AT_rich Low_complexity Low_complexity 1 24 0 457 273 67 13 chr10 113709529 113709679 -31879609 + MIR SINE MIR 25 182 -80 263 330 0 9 chr10 113710686 113710795 -31878493 + MER103 DNA DNA 16 123 -43 191 185 0 19 chr10 113714009 113714063 -31875225 + (CA)n Simple_repeat Simple_repeat 1 53 0 801 179 80 12 chr10 113715189 113715351 -31873937 - FRAM SINE Alu -5 171 1 213 194 145 16 chr10 113716821 113716883 -31872405 + MIR3 SINE MIR 105 174 -34 229 271 0 0 chr10 113717321 113717369 -31871919 + (CA)n Simple_repeat Simple_repeat 2 49 0 212 167 28 0 chr10 113718768 113718804 -31870484 + L2 LINE L2 3266 3302 -11 232 259 0 0 chr10 113719228 113719286 -31870002 + L2 LINE L2 3197 3254 -18 1047 278 100 16 chr10 113719579 113720240 -31869048 + L2 LINE L2 2602 3312 -1 904 117 67 22 chr10 113720564 113720743 -31868545 + MER53 DNA DNA 1 187 -2 342 0 0 0 chr10 113721806 113721844 -31867444 + (CA)n Simple_repeat Simple_repeat 1 38 0 260 296 46 46 chr10 113721918 113722026 -31867262 + MIR SINE MIR 85 192 -70 2303 90 0 0 chr10 113722662 113722973 -31866315 + AluY SINE Alu 1 311 0 331 304 81 0 chr10 113723094 113723242 -31866046 + MIR3 SINE MIR 30 189 -19 210 192 0 0 chr10 113723461 113723513 -31865775 + (CCA)n Simple_repeat Simple_repeat 3 54 0 303 263 174 42 chr10 113723687 113723894 -31865394 + MIR SINE MIR 30 244 -18 511 32 0 0 chr10 113724599 113724662 -31864626 + MER41A LTR ERV1 401 463 -91 2305 90 0 6 chr10 113725013 113725325 -31863963 + AluSg SINE Alu 1 310 0 524 179 154 0 chr10 113725793 113725925 -31863363 - MER5A DNA MER1_type -30 159 4 276 258 31 21 chr10 113726646 113726743 -31862545 + GA-rich Low_complexity Low_complexity 1 98 0 689 318 65 31 chr10 113726950 113727302 -31861986 + L2 LINE L2 2950 3313 0 361 237 8 61 chr10 113728801 113728932 -31860356 - MER119 DNA MER1_type -3 580 457 458 242 92 8 chr10 113728936 113729056 -31860232 - MER119 DNA MER1_type -450 133 4 195 100 0 0 chr10 113729196 113729226 -31860062 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 301 303 84 17 chr10 113730450 113730569 -31858719 - MIR SINE MIR -62 146 20 287 298 36 0 chr10 113731027 113731111 -31858177 - MER81 DNA DNA -17 97 11 435 250 60 0 chr10 113731869 113731969 -31857319 + L2 LINE L2 3204 3309 -4 634 328 0 0 chr10 113732707 113732902 -31856386 + Harlequin LTR ERV1 776 970 -6815 962 327 36 36 chr10 113733138 113733835 -31855453 + Harlequin LTR ERV1 1290 1986 -5799 1309 139 43 13 chr10 113733888 113734118 -31855170 + LTR18B LTR ERVL 249 485 -129 256 186 0 0 chr10 113734114 113734157 -31855131 + LTR18B LTR ERVL 223 265 -349 * 235 326 0 21 chr10 113734166 113734261 -31855027 + GA-rich Low_complexity Low_complexity 2 94 0 189 147 0 0 chr10 113734320 113734354 -31854934 + (GA)n Simple_repeat Simple_repeat 2 35 0 376 352 12 0 chr10 113734398 113734572 -31854716 + Harlequin LTR ERV1 2851 4112 -3624 2418 330 51 30 chr10 113734719 113736260 -31853028 + Harlequin LTR ERV1 4177 5749 -2036 262 340 0 0 chr10 113736490 113736593 -31852695 + Harlequin LTR ERV1 3026 3128 -3768 310 317 107 45 chr10 113737968 113738277 -31851011 + L2 LINE L2 2945 3272 0 261 83 0 0 chr10 113738302 113738338 -31850950 + (CA)n Simple_repeat Simple_repeat 1 36 0 300 336 17 26 chr10 113739428 113739544 -31849744 + L2 LINE L2 3154 3268 -4 374 325 160 41 chr10 113741344 113742058 -31847230 + L2 LINE L2 1989 2787 -527 423 311 135 46 chr10 113742126 113742451 -31846837 + L2 LINE L2 2910 3263 -9 222 174 0 0 chr10 113742461 113742507 -31846781 + (TGAA)n Simple_repeat Simple_repeat 3 48 0 227 100 0 25 chr10 113743211 113743251 -31846037 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 351 0 0 0 chr10 113744061 113744100 -31845188 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1098 193 42 25 chr10 113744561 113744800 -31844488 + L1MB7 LINE L1 5933 6175 -9 270 176 0 0 chr10 113745715 113745766 -31843522 + (TATG)n Simple_repeat Simple_repeat 4 54 0 2424 80 0 3 chr10 113746007 113746308 -31842980 + AluSg SINE Alu 1 300 -10 1100 158 150 4 chr10 113748119 113748359 -31840929 - ORSL DNA AcHobo 0 275 1 1385 123 0 38 chr10 113750663 113750874 -31838414 - AluSg/x SINE Alu -4 308 106 486 153 14 0 chr10 113750899 113750971 -31838317 - AluJb SINE Alu -156 156 84 218 269 15 0 chr10 113751685 113751752 -31837536 + GA-rich Low_complexity Low_complexity 1 68 0 463 307 22 7 chr10 113753704 113753841 -31835447 - L2 LINE L2 0 3272 3134 2154 141 19 73 chr10 113753848 113754260 -31835028 - MLT1B LTR MaLR 0 390 1 24 0 0 0 chr10 113754284 113754308 -31834980 + AT_rich Low_complexity Low_complexity 1 24 0 1238 190 5 0 chr10 113754354 113754565 -31834723 + AluJo SINE Alu 64 275 -37 194 323 37 58 chr10 113754693 113754882 -31834406 - L2 LINE L2 -337 2977 2793 479 311 19 1 chr10 113755035 113755205 -31834083 - MIR SINE MIR -56 206 30 819 181 0 8 chr10 113755481 113755614 -31833674 + FLAM_C SINE Alu 1 132 -1 278 301 73 46 chr10 113757393 113757612 -31831676 - L2 LINE L2 -205 3067 2843 209 103 17 121 chr10 113758011 113758069 -31831219 - L2 LINE L2 -99 3214 3163 2203 148 75 13 chr10 113758407 113758780 -31830508 + MSTD LTR MaLR 1 396 0 4291 204 64 56 chr10 113759535 113760549 -31828739 - L1ME1 LINE L1 -18 6646 5641 2020 122 3 16 chr10 113760549 113760853 -31828435 - AluSg SINE Alu -10 300 1 4291 204 64 56 chr10 113760853 113760988 -31828300 - L1ME1 LINE L1 -1023 5641 5509 737 208 0 8 chr10 113760988 113761113 -31828175 - FLAM_A SINE Alu -9 124 1 4291 204 64 56 chr10 113761113 113762265 -31827023 - L1ME1 LINE L1 -1155 5509 4337 27 0 0 0 chr10 113762332 113762359 -31826929 + AT_rich Low_complexity Low_complexity 1 27 0 1539 187 14 7 chr10 113762359 113762642 -31826646 + AluJo SINE Alu 1 285 -27 290 224 0 0 chr10 113762648 113762715 -31826573 - L1MB3 LINE L1 -26 6157 6091 6394 196 24 33 chr10 113762751 113764040 -31825248 - L1ME1 LINE L1 -5231 1311 33 2339 118 0 0 chr10 113764040 113764346 -31824942 + AluSq SINE Alu 1 306 -7 6394 196 24 33 chr10 113764346 113764378 -31824910 - L1ME1 LINE L1 -6509 33 2 1660 273 13 6 chr10 113764437 113764914 -31824374 - L1M4 LINE L1 -2293 3853 3374 828 265 152 18 chr10 113765254 113765643 -31823645 + MLT1L LTR MaLR 170 610 -5 325 367 148 0 chr10 113766021 113766190 -31823098 - MIR3 SINE MIR -10 198 5 1871 170 3 13 chr10 113766366 113766677 -31822611 - AluJo SINE Alu -2 310 3 288 285 31 15 chr10 113768386 113768516 -31820772 + L2 LINE L2 2258 2389 -925 251 155 35 0 chr10 113770971 113771029 -31818259 - Alu SINE Alu 0 302 243 1539 149 41 22 chr10 113771846 113772115 -31817173 + L1MC2 LINE L1 6060 6333 -11 2134 229 103 42 chr10 113772232 113772589 -31816699 - L1ME3 LINE L1 0 6164 5830 2726 112 123 106 chr10 113772589 113773242 -31816046 - MER4A LTR ERV1 0 664 1 2134 229 103 42 chr10 113773242 113773780 -31815508 - L1ME3 LINE L1 -334 5830 5326 785 195 8 0 chr10 113773780 113773903 -31815385 - FLAM_C SINE Alu -9 124 1 2134 229 103 42 chr10 113773903 113774419 -31814869 - L1ME3 LINE L1 -838 5326 4843 360 0 0 0 chr10 113774419 113774459 -31814829 + (CA)n Simple_repeat Simple_repeat 2 41 0 2134 229 103 42 chr10 113774459 113774526 -31814762 - L1ME3 LINE L1 -1321 4843 4782 2189 110 7 0 chr10 113774526 113774816 -31814472 - AluSx SINE Alu -16 296 5 2134 229 103 42 chr10 113774816 113774924 -31814364 - L1ME3 LINE L1 -1382 4782 4457 1441 236 124 34 chr10 113775019 113775696 -31813592 - L1ME3 LINE L1 -1675 4471 3734 1797 173 0 39 chr10 113777103 113777248 -31812040 + AluJb SINE Alu 1 129 -183 2351 90 0 20 chr10 113777248 113777548 -31811740 + AluSg SINE Alu 1 294 -16 1797 173 0 39 chr10 113777548 113777709 -31811579 + AluJb SINE Alu 129 295 -17 500 278 190 19 chr10 113778090 113778306 -31810982 - MIR SINE MIR -7 255 3 213 320 77 26 chr10 113778680 113778758 -31810530 - L2 LINE L2 -37 3235 3154 323 256 185 90 chr10 113779001 113779380 -31809908 - L2 LINE L2 -349 2965 2551 550 56 0 45 chr10 113779586 113779675 -31809613 - L1MA7 LINE L1 0 6291 6207 203 280 120 10 chr10 113780038 113780138 -31809150 + L3b LINE CR1 1342 1452 -131 188 171 49 0 chr10 113780222 113780263 -31809025 - L2 LINE L2 0 3313 3271 235 259 198 49 chr10 113780712 113780874 -31808414 - MIR3 SINE MIR -21 187 2 21 0 0 0 chr10 113782504 113782525 -31806763 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 113782906 113782927 -31806361 + AT_rich Low_complexity Low_complexity 1 21 0 2250 96 13 25 chr10 113785132 113785446 -31803842 - AluSg SINE Alu 0 310 1 371 308 236 5 chr10 113786978 113787173 -31802115 - MIR SINE MIR -10 252 13 30 0 0 0 chr10 113791075 113791105 -31798183 + AT_rich Low_complexity Low_complexity 1 30 0 1738 170 16 22 chr10 113791316 113791628 -31797660 - AluJo SINE Alu -2 310 1 256 180 0 0 chr10 113791658 113791708 -31797580 - L1MC1 LINE L1 -16 6317 6268 2028 85 4 0 chr10 113792293 113792553 -31796735 - AluSq SINE Alu -15 298 38 195 336 102 0 chr10 113792841 113792969 -31796319 + L2 LINE L2 2286 2426 -888 2374 89 7 0 chr10 113792971 113793273 -31796015 - AluSp SINE Alu -9 304 1 193 276 155 17 chr10 113794561 113794619 -31794669 - MIR SINE MIR -188 74 9 22 0 0 0 chr10 113794664 113794686 -31794602 + AT_rich Low_complexity Low_complexity 1 22 0 1955 83 30 70 chr10 113795793 113796095 -31793193 - AluY SINE Alu -21 290 1 239 145 205 0 chr10 113796198 113796281 -31793007 - L1ME4a LINE L1 -1 6120 6021 3209 88 12 34 chr10 113796881 113797197 -31792091 + L1PA16 LINE L1 5671 5974 -192 1948 158 0 3 chr10 113797197 113797508 -31791780 + AluJb SINE Alu 1 310 -2 3209 88 12 34 chr10 113797508 113797689 -31791599 + L1PA16 LINE L1 5974 6157 -9 199 105 105 0 chr10 113798095 113798133 -31791155 + L2 LINE L2 3263 3304 -9 2101 120 3 10 chr10 113798812 113799113 -31790175 + AluSq SINE Alu 1 299 -14 218 243 68 54 chr10 113799451 113799525 -31789763 - L2 LINE L2 -208 3064 2990 205 217 33 33 chr10 113799994 113800054 -31789234 + L2 LINE L2 3254 3313 0 215 360 35 0 chr10 113800512 113800598 -31788690 + L2 LINE L2 1415 1503 -1811 1848 184 0 0 chr10 113800600 113800909 -31788379 + AluJo SINE Alu 2 310 -2 724 266 28 3 chr10 113800924 113801243 -31788045 + L1M4 LINE L1 3191 3517 -2629 270 136 0 0 chr10 113801345 113801389 -31787899 + (A)n Simple_repeat Simple_repeat 1 44 0 2131 89 14 0 chr10 113801435 113801752 -31787536 - AluSx SINE Alu 0 321 1 4049 149 62 46 chr10 113801780 113802611 -31786677 + L1MB5 LINE L1 5199 6049 -125 1936 141 30 7 chr10 113802611 113802915 -31786373 + AluJb SINE Alu 1 311 -1 4049 149 62 46 chr10 113802915 113803035 -31786253 + L1MB5 LINE L1 6049 6166 -8 366 170 106 0 chr10 113803047 113803141 -31786147 + L1MCb LINE L1 978 1081 -4964 * 2552 160 47 22 chr10 113803137 113803477 -31785811 + L1MC3 LINE L1 7161 7522 -263 2249 101 3 7 chr10 113803477 113803783 -31785505 + AluSp SINE Alu 1 305 -8 2552 160 47 22 chr10 113803783 113804023 -31785265 + L1MC3 LINE L1 7522 7755 -30 1343 265 64 39 chr10 113804025 113804113 -31785175 + L1MCb LINE L1 1099 1183 -5562 282 56 0 0 chr10 113804113 113804149 -31785139 + (TCTA)n Simple_repeat Simple_repeat 1 36 0 1343 265 64 39 chr10 113804149 113805035 -31784253 + L1MCb LINE L1 1183 2288 -4457 570 193 37 6 chr10 113805054 113805215 -31784073 + L1MCb LINE L1 3259 3424 -3140 182 245 0 20 chr10 113805394 113805443 -31783845 - MER5B DNA MER1_type -20 158 111 * 350 224 66 13 chr10 113805437 113805513 -31783775 + MER5B DNA MER1_type 99 178 0 1563 204 0 36 chr10 113805608 113805917 -31783371 + AluJb SINE Alu 1 298 -14 2038 124 3 0 chr10 113806415 113806720 -31782568 + AluSx SINE Alu 1 306 0 1337 153 40 55 chr10 113807985 113808312 -31780976 - MER33 DNA MER1_type 0 324 3 301 195 27 64 chr10 113809029 113809122 -31780166 - AluJ/FLAM SINE Alu -234 68 1 337 339 36 24 chr10 113809201 113809369 -31779919 - MIR SINE MIR -80 182 13 2246 99 0 3 chr10 113809456 113809750 -31779538 + AluSc SINE Alu 2 294 -15 416 170 129 61 chr10 113810027 113810174 -31779114 - MER103 DNA DNA -7 159 3 192 158 0 0 chr10 113810946 113810984 -31778304 + (CTATT)n Simple_repeat Simple_repeat 2 39 0 442 157 20 29 chr10 113810998 113811100 -31778188 + MER112 DNA MER1_type 150 250 -10 1717 225 14 2 chr10 113811751 113812206 -31777082 + MER89 LTR ERV1 1 559 0 213 306 47 0 chr10 113812206 113812291 -31776997 + MIR SINE MIR 52 140 -122 357 332 70 23 chr10 113813272 113813486 -31775802 - L1ME3A LINE L1 -9 6161 5938 2290 164 43 0 chr10 113813511 113813925 -31775363 + MSTB1 LTR MaLR 1 432 0 673 120 46 0 chr10 113813987 113814095 -31775193 + L1PA13 LINE L1 6050 6162 -1 1635 237 49 63 chr10 113814095 113814819 -31774469 - L1MC5 LINE L1 -442 7519 6804 1891 142 50 67 chr10 113814844 113815323 -31773965 - L1MB8 LINE L1 -5 6173 5703 623 292 113 4 chr10 113815383 113815657 -31773631 + LTR33 LTR ERVL 209 512 -9 554 216 124 88 chr10 113815667 113815821 -31773467 - HAL1 LINE L1 -696 1811 1641 6118 88 40 0 chr10 113815821 113816966 -31772322 - L1PA13 LINE L1 -4 6159 5009 554 216 124 88 chr10 113816966 113817094 -31772194 - HAL1 LINE L1 -866 1641 1519 565 322 149 27 chr10 113817183 113817657 -31771631 - L2 LINE L2 -5 3267 2741 23 0 0 0 chr10 113818371 113818394 -31770894 + AT_rich Low_complexity Low_complexity 1 23 0 1502 98 0 0 chr10 113818423 113818647 -31770641 + L1MA1 LINE L1 6079 6302 0 629 149 10 131 chr10 113818725 113818849 -31770439 - L1MD3 LINE L1 -5 8037 7954 257 0 30 0 chr10 113818849 113818882 -31770406 + (TC)n Simple_repeat Simple_repeat 1 34 0 629 149 10 131 chr10 113818882 113818963 -31770325 - L1MD3 LINE L1 -88 7954 7865 1858 162 30 11 chr10 113818966 113819337 -31769951 - L1MC4 LINE L1 -486 7556 7179 327 302 41 35 chr10 113819820 113819989 -31769299 + L2 LINE L2 2883 3052 -220 482 218 60 94 chr10 113819994 113820260 -31769028 - LTR16A1 LTR ERVL 0 457 201 566 271 60 80 chr10 113820662 113820998 -31768290 - L2 LINE L2 -166 3147 2819 319 265 53 61 chr10 113821319 113821451 -31767837 + L1MC4a LINE L1 6221 6351 -1457 21 0 0 0 chr10 113821803 113821824 -31767464 + AT_rich Low_complexity Low_complexity 1 21 0 458 259 29 29 chr10 113822631 113822801 -31766487 + L1MC4a LINE L1 6398 6567 -1241 432 0 0 0 chr10 113822824 113822872 -31766416 + (TG)n Simple_repeat Simple_repeat 1 48 0 252 0 0 0 chr10 113822871 113822899 -31766389 + (GA)n Simple_repeat Simple_repeat 1 28 0 * 2477 241 141 18 chr10 113822909 113823940 -31765348 + L1MC4 LINE L1 6744 7901 -141 405 222 74 30 chr10 113824113 113824248 -31765040 + L1MC5 LINE L1 7773 7913 -48 357 246 109 0 chr10 113824275 113824385 -31764903 - L2 LINE L2 -1495 1819 1698 231 260 0 0 chr10 113824393 113824466 -31764822 - L1MC4 LINE L1 0 8042 7970 953 256 58 46 chr10 113824476 113824871 -31764417 - L2 LINE L2 -1611 1703 1304 276 324 196 7 chr10 113824879 113825027 -31764261 + MER5A DNA MER1_type 9 184 -5 * 682 250 123 13 chr10 113825016 113825244 -31764044 - L2 LINE L2 -2012 1302 1050 798 160 6 65 chr10 113826729 113826898 -31762390 - FRAM SINE Alu -17 159 1 803 260 13 39 chr10 113828194 113828425 -31760863 + MIR SINE MIR 3 227 -35 2347 74 0 10 chr10 113829492 113829791 -31759497 - AluY SINE Alu -15 296 1 200 325 0 26 chr10 113829808 113829885 -31759403 + L2 LINE L2 2681 2755 -559 312 167 15 0 chr10 113829969 113830035 -31759253 + L1MC5 LINE L1 7832 7898 -63 2125 111 0 36 chr10 113831159 113831465 -31757823 - AluSc SINE Alu -14 295 1 596 199 113 0 chr10 113833107 113833258 -31756030 + MER20 DNA MER1_type 25 192 -27 22 56 0 0 chr10 113834590 113834626 -31754662 + AT_rich Low_complexity Low_complexity 1 36 0 254 269 125 44 chr10 113835651 113835838 -31753450 + MIR SINE MIR 13 224 -38 897 293 150 7 chr10 113835872 113836369 -31752919 + L2 LINE L2 2748 3312 -1 708 278 79 22 chr10 113836406 113836683 -31752605 - L3 LINE CR1 -804 773 481 1137 298 157 26 chr10 113836685 113837346 -31751942 + L3 LINE CR1 826 1573 -4 663 241 31 0 chr10 113837863 113838054 -31751234 + L1MC5 LINE L1 7632 7828 -133 434 285 84 36 chr10 113839093 113839296 -31749992 + L1ME LINE L1 4144 4369 -1777 2497 118 14 14 chr10 113839296 113839660 -31749628 - THE1B LTR MaLR 0 364 1 434 285 84 36 chr10 113839660 113839765 -31749523 + L1ME LINE L1 4369 4467 -1679 32 92 0 8 chr10 113839783 113839861 -31749427 + AT_rich Low_complexity Low_complexity 1 79 -40 2258 63 0 36 chr10 113839861 113840193 -31749095 + AluY SINE Alu 1 311 0 32 92 0 8 chr10 113840193 113840234 -31749054 + AT_rich Low_complexity Low_complexity 79 119 0 1714 169 39 3 chr10 113840236 113840520 -31748768 + AluJo SINE Alu 1 294 -18 428 139 28 0 chr10 113840545 113840617 -31748671 - Tigger5 DNA MER2_type 0 2323 2250 1420 211 13 51 chr10 113840618 113840930 -31748358 - Tigger5 DNA MER2_type -2023 300 1 329 298 58 10 chr10 113841026 113841234 -31748054 + L1ME LINE L1 4562 4779 -1367 375 326 14 7 chr10 113841295 113841442 -31747846 + L1ME LINE L1 4859 5006 -1140 25 0 0 0 chr10 113841558 113841583 -31747705 + AT_rich Low_complexity Low_complexity 1 25 0 480 183 0 0 chr10 113841777 113841859 -31747429 + MLT1J1 LTR MaLR 239 320 -126 21 57 0 0 chr10 113841968 113842003 -31747285 + AT_rich Low_complexity Low_complexity 1 35 0 413 281 6 0 chr10 113842003 113842167 -31747121 + L1ME LINE L1 5270 5434 -730 228 283 43 0 chr10 113842165 113842257 -31747031 + HAL1 LINE L1 1282 1377 -1130 * 509 284 96 79 chr10 113842262 113842730 -31746558 - LTR33 LTR ERVL -10 511 36 871 219 152 4 chr10 113842767 113843036 -31746252 + HAL1 LINE L1 1384 1692 -815 561 275 193 28 chr10 113843166 113843559 -31745729 + HAL1 LINE L1 1688 2145 -362 471 279 50 80 chr10 113843582 113843883 -31745405 + HAL1 LINE L1 2212 2503 -4 237 33 0 0 chr10 113844235 113844265 -31745023 + (GA)n Simple_repeat Simple_repeat 2 31 0 598 256 55 88 chr10 113845255 113845525 -31743763 + L2 LINE L2 1474 1733 -1581 2329 92 0 13 chr10 113845525 113845828 -31743460 - AluY SINE Alu -9 302 4 598 256 55 88 chr10 113845828 113845885 -31743403 + L2 LINE L2 1733 1790 -1524 1984 285 107 39 chr10 113845887 113847101 -31742187 + L2 LINE L2 2024 3313 0 1121 158 0 27 chr10 113847778 113847961 -31741327 - FRAM SINE Alu -1 175 1 611 228 44 0 chr10 113848244 113848380 -31740908 - MER5A DNA MER1_type -10 179 38 2777 16 0 0 chr10 113848466 113848770 -31740518 - AluYb8 SINE Alu -14 304 1 730 211 91 34 chr10 113849169 113849377 -31739911 + LTR8 LTR ERV1 1 220 -471 2392 198 68 11 chr10 113849531 113850057 -31739231 + MER74A LTR ERVL 3 558 0 209 232 49 12 chr10 113850465 113850547 -31738741 - MIR SINE MIR -109 153 69 300 289 53 18 chr10 113850778 113850892 -31738396 - L1MC4a LINE L1 -1612 6196 6079 213 338 26 0 chr10 113851543 113851620 -31737668 + L2 LINE L2 2896 2974 -339 238 357 16 48 chr10 113851696 113851822 -31737466 + L2 LINE L2 2987 3108 -164 22 35 0 0 chr10 113852613 113852642 -31736646 + AT_rich Low_complexity Low_complexity 1 29 0 1561 165 12 78 chr10 113854803 113854941 -31734347 + AluJo SINE Alu 1 146 -166 210 37 0 0 chr10 113854941 113854968 -31734320 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1964 68 115 11 chr10 113854968 113855247 -31734041 + AluSc SINE Alu 1 308 -1 1561 165 12 78 chr10 113855247 113855429 -31733859 + AluJo SINE Alu 144 301 -11 246 318 166 14 chr10 113855617 113855834 -31733454 + L2 LINE L2 2264 2513 -801 864 252 58 21 chr10 113855888 113856130 -31733158 + MIR SINE MIR 9 259 -3 393 371 28 9 chr10 113856143 113856356 -31732932 + L2 LINE L2 2590 2806 -508 22 0 0 0 chr10 113856945 113856967 -31732321 + AT_rich Low_complexity Low_complexity 1 22 0 221 159 23 0 chr10 113857040 113857084 -31732204 - L2 LINE L2 -4 3309 3265 341 268 14 72 chr10 113857965 113858103 -31731185 + MIR SINE MIR 61 190 -72 22 0 0 0 chr10 113858165 113858187 -31731101 + AT_rich Low_complexity Low_complexity 1 22 0 484 266 47 5 chr10 113858260 113858452 -31730836 + L1MC4a LINE L1 5721 5920 -1888 732 258 0 7 chr10 113858458 113858613 -31730675 + MIR SINE MIR 20 173 -89 506 210 109 0 chr10 113859497 113859616 -31729672 - FLAM_A SINE Alu -1 132 1 251 269 172 28 chr10 113859845 113859990 -31729298 - MIR3 SINE MIR -5 203 38 23 0 0 0 chr10 113860760 113860783 -31728505 + AT_rich Low_complexity Low_complexity 1 23 0 257 254 26 88 chr10 113861225 113861418 -31727870 + MLT1K LTR MaLR 381 561 -27 282 293 40 27 chr10 113861545 113861695 -31727593 + MLT1I LTR MaLR 196 347 -62 961 113 68 23 chr10 113862359 113862536 -31726752 - L1MC2 LINE L1 -8 6336 6152 239 307 53 53 chr10 113863172 113863286 -31726002 - L2 LINE L2 -9 3263 3150 192 77 0 0 chr10 113863325 113863351 -31725937 + (TTCA)n Simple_repeat Simple_repeat 4 29 0 25 0 0 0 chr10 113863352 113863377 -31725911 + AT_rich Low_complexity Low_complexity 1 25 0 2147 108 7 0 chr10 113863377 113863663 -31725625 - AluSq SINE Alu -25 288 1 29 28 0 0 chr10 113863707 113863743 -31725545 + AT_rich Low_complexity Low_complexity 1 36 0 2067 114 0 0 chr10 113863753 113864033 -31725255 - AluSx SINE Alu -32 280 1 1678 245 41 38 chr10 113864502 113864789 -31724499 - L2 LINE L2 -1 3312 3027 5323 58 3 3 chr10 113864789 113865456 -31723832 + PABL_B LTR ERV1 1 667 0 1678 245 41 38 chr10 113865456 113865483 -31723805 - L2 LINE L2 -286 3027 3002 2273 112 0 3 chr10 113865483 113865779 -31723509 + AluSx SINE Alu 14 308 -4 1678 245 41 38 chr10 113865779 113866115 -31723173 - L2 LINE L2 -311 3002 2664 627 276 41 7 chr10 113866116 113866756 -31722532 - L1MEd LINE L1 -3568 2561 1764 1211 276 64 28 chr10 113866843 113867054 -31722234 - L1MEd LINE L1 -4612 1698 1496 1067 223 23 5 chr10 113867054 113867274 -31722014 - MER58A DNA MER1_type 0 224 1 1211 276 64 28 chr10 113867274 113867864 -31721424 - L1MEd LINE L1 -4814 1496 831 21 0 0 0 chr10 113867901 113867922 -31721366 + AT_rich Low_complexity Low_complexity 1 21 0 902 296 99 30 chr10 113868143 113868647 -31720641 + MLT1K LTR MaLR 43 581 -7 2492 58 3 3 chr10 113870015 113870324 -31718964 + AluY SINE Alu 1 309 -2 692 289 101 9 chr10 113870381 113870609 -31718679 + MIR SINE MIR 12 260 -2 2106 138 3 0 chr10 113871975 113872273 -31717015 + AluSx SINE Alu 1 299 -13 466 277 146 19 chr10 113872421 113872627 -31716661 + MIR SINE MIR 5 236 -26 300 155 0 0 chr10 113874505 113874563 -31714725 + L1PB4 LINE L1 6098 6155 -1 735 177 0 0 chr10 113874930 113875054 -31714234 + MER2 DNA MER2_type 12 135 -210 28 0 0 0 chr10 113875057 113875085 -31714203 + AT_rich Low_complexity Low_complexity 1 28 0 1250 159 4 9 chr10 113875085 113875311 -31713977 + MER2 DNA MER2_type 120 344 -1 198 71 0 0 chr10 113875440 113875468 -31713820 + (TTTAG)n Simple_repeat Simple_repeat 3 30 0 1134 110 13 0 chr10 113875468 113875622 -31713666 - AluSg/x SINE Alu -28 282 127 654 313 34 75 chr10 113875684 113875867 -31713421 + L2 LINE L2 2776 2965 -348 2258 59 0 4 chr10 113875867 113876138 -31713150 - AluY SINE Alu -5 306 37 654 313 34 75 chr10 113876138 113876491 -31712797 + L2 LINE L2 2965 3300 -13 198 0 0 0 chr10 113876491 113876513 -31712775 + (TGAA)n Simple_repeat Simple_repeat 1 22 0 593 264 140 23 chr10 113877480 113877745 -31711543 - MER102b DNA MER1_type 0 341 46 2234 97 0 3 chr10 113878631 113878921 -31710367 - AluSc SINE Alu -20 289 1 23 0 0 0 chr10 113879094 113879117 -31710171 + AT_rich Low_complexity Low_complexity 1 23 0 236 238 0 0 chr10 113879211 113879253 -31710035 + (TG)n Simple_repeat Simple_repeat 2 43 0 2334 75 4 0 chr10 113879943 113880223 -31709065 + AluSg SINE Alu 2 282 -28 388 0 0 0 chr10 113880223 113880266 -31709022 + (TAAA)n Simple_repeat Simple_repeat 2 132 0 1071 324 97 32 chr10 113880460 113881459 -31707829 + L2 LINE L2 976 2039 -1275 240 333 9 29 chr10 113881631 113881736 -31707552 + LTR16C LTR ERVL 147 249 -242 596 248 45 40 chr10 113882190 113882388 -31706900 + MLT1J LTR MaLR 1 199 -312 332 105 35 0 chr10 113882395 113882452 -31706836 + CT-rich Low_complexity Low_complexity 2 60 0 2643 55 0 0 chr10 113883153 113883462 -31705826 + AluY SINE Alu 1 309 -2 346 259 0 65 chr10 113883586 113883694 -31705594 - MER5B DNA MER1_type -73 105 5 759 293 54 97 chr10 113884102 113884668 -31704620 + L2 LINE L2 2265 2854 -418 445 289 23 8 chr10 113884668 113884796 -31704492 - MER94 DNA DNA -1 133 4 759 293 54 97 chr10 113884796 113885003 -31704285 + L2 LINE L2 2854 2989 -283 2638 166 38 7 chr10 113885003 113885454 -31703834 + MLT1C LTR MaLR 1 465 -2 759 293 54 97 chr10 113885454 113885553 -31703735 + L2 LINE L2 2989 3091 -181 188 343 90 0 chr10 113885584 113885651 -31703637 + MIR SINE MIR 28 100 -162 378 0 0 0 chr10 113886037 113886079 -31703209 + (TG)n Simple_repeat Simple_repeat 2 43 0 2335 78 3 0 chr10 113886079 113886362 -31702926 - AluSx SINE Alu -28 284 1 1878 161 57 23 chr10 113886392 113886745 -31702543 + MLT1A1 LTR MaLR 1 365 0 202 260 68 27 chr10 113886847 113886920 -31702368 + MIR SINE MIR 107 182 -80 482 276 95 50 chr10 113887937 113888014 -31701274 - MER102a DNA MER1_type -1095 322 250 1155 203 61 9 chr10 113888014 113888226 -31701062 - MER58A DNA MER1_type -1 223 1 482 276 95 50 chr10 113888226 113888369 -31700919 - MER102a DNA MER1_type -1167 250 92 422 316 119 3 chr10 113888456 113888667 -31700621 - MIR SINE MIR -31 231 6 585 162 13 7 chr10 113888756 113888863 -31700425 + MLT1C LTR MaLR 382 467 0 1065 209 139 47 chr10 113888868 113889133 -31700155 + L1ME1 LINE L1 5745 6057 -109 2357 91 0 0 chr10 113889133 113889430 -31699858 - AluY SINE Alu -14 297 1 1065 209 139 47 chr10 113889430 113889546 -31699742 + L1ME1 LINE L1 6057 6161 -5 2307 88 3 3 chr10 113889568 113889864 -31699424 + AluSx SINE Alu 9 304 -8 2058 104 7 0 chr10 113891824 113892104 -31697184 + AluSx SINE Alu 1 282 -30 754 265 142 35 chr10 113892107 113892709 -31696579 - L1ME4a LINE L1 -164 5957 5292 2321 98 10 0 chr10 113892923 113893229 -31696059 - AluSc SINE Alu 0 309 1 195 129 0 0 chr10 113893377 113893408 -31695880 + (TCC)n Simple_repeat Simple_repeat 3 33 0 337 305 165 20 chr10 113893477 113893828 -31695460 - L1ME4a LINE L1 -1335 4811 4410 228 308 51 51 chr10 113893925 113894081 -31695207 - L1ME4a LINE L1 -1960 4186 4031 1978 125 6 35 chr10 113894458 113894771 -31694517 + AluSx SINE Alu 1 304 -8 304 329 93 0 chr10 113894784 113894924 -31694364 - MIR SINE MIR 0 262 110 644 228 146 6 chr10 113895028 113895186 -31694102 - MER5A DNA MER1_type 0 189 10 21 36 0 0 chr10 113895242 113895270 -31694018 + AT_rich Low_complexity Low_complexity 1 28 0 2344 107 0 0 chr10 113895272 113895582 -31693706 + AluSg SINE Alu 1 310 0 21 0 0 0 chr10 113896584 113896605 -31692683 + AT_rich Low_complexity Low_complexity 1 21 0 498 206 20 10 chr10 113897591 113897693 -31691595 + MER5A DNA MER1_type 10 112 -77 211 169 270 34 chr10 113897627 113897716 -31691572 - MER5A DNA MER1_type -34 155 46 * 1582 144 3 55 chr10 113897738 113898030 -31691258 + AluJo SINE Alu 14 290 -22 27 0 0 0 chr10 113898030 113898057 -31691231 + AT_rich Low_complexity Low_complexity 1 27 0 1501 137 4 58 chr10 113898278 113898555 -31690733 + AluJo SINE Alu 29 290 -22 372 262 54 60 chr10 113898648 113898728 -31690560 - MIR SINE MIR -112 150 69 2081 123 0 3 chr10 113898728 113899045 -31690243 - AluSx SINE Alu 0 316 1 372 262 54 60 chr10 113899045 113899112 -31690176 - MIR SINE MIR -193 69 3 218 185 31 0 chr10 113899222 113899287 -31690001 + CT-rich Low_complexity Low_complexity 3 69 0 300 325 50 8 chr10 113899321 113899441 -31689847 - L2 LINE L2 -1 3312 3188 9881 127 57 22 chr10 113899464 113900119 -31689169 + MER41A-int LTR ERV1 3873 4504 -1442 198 0 0 0 chr10 113900119 113900141 -31689147 + (CA)n Simple_repeat Simple_repeat 1 22 0 9881 127 57 22 chr10 113900141 113901983 -31687305 + MER41A-int LTR ERV1 4504 5944 -2 2871 78 2 1 chr10 113901983 113902469 -31686819 + MER41A LTR ERV1 1 554 0 2689 150 26 43 chr10 113902556 113902787 -31686501 + MER31A LTR ERV1 1 234 -251 3648 104 68 46 chr10 113902787 113903374 -31685914 - MER4A LTR ERV1 0 600 1 2689 150 26 43 chr10 113903374 113903635 -31685653 + MER31A LTR ERV1 234 485 0 256 353 125 4 chr10 113903652 113903929 -31685359 - L2 LINE L2 -258 3055 2742 1453 157 0 5 chr10 113903933 113904177 -31685111 + AluJb SINE Alu 67 309 0 4062 131 32 42 chr10 113904177 113904863 -31684425 + MER39 LTR ERV1 29 707 0 559 268 146 44 chr10 113904863 113905029 -31684259 - L2 LINE L2 -562 2752 2604 770 174 217 27 chr10 113905029 113905213 -31684075 - MER20 DNA MER1_type 0 219 1 559 268 146 44 chr10 113905213 113905367 -31683921 - L2 LINE L2 -710 2604 2399 298 222 46 20 chr10 113906985 113907086 -31682202 - MIR SINE MIR -78 130 27 920 151 0 0 chr10 113907088 113907227 -31682061 - FLAM_C SINE Alu -4 139 1 239 302 71 8 chr10 113907292 113907461 -31681827 - MIR SINE MIR 0 262 43 2197 219 171 33 chr10 113908010 113908473 -31680815 - Zaphod DNA AcHobo -3179 852 454 2117 121 0 3 chr10 113908473 113908763 -31680525 - AluSx SINE Alu -23 289 1 2197 219 171 33 chr10 113908763 113909047 -31680241 - Zaphod DNA AcHobo -3577 454 2 2147 231 117 20 chr10 113909051 113909481 -31679807 - MER50 LTR ERV1 -2 732 214 2390 82 3 10 chr10 113909481 113909786 -31679502 - AluSp SINE Alu -10 303 1 2147 231 117 20 chr10 113909786 113910014 -31679274 - MER50 LTR ERV1 -520 214 10 4195 124 74 42 chr10 113910596 113911964 -31677324 + pTR5 LTR ERV1 743 2438 0 1015 214 4 150 chr10 113912105 113912420 -31676868 + LTR8 LTR ERV1 1 286 -441 1219 216 88 72 chr10 113912520 113912964 -31676324 + LTR8A LTR ERV1 277 727 0 447 280 32 38 chr10 113913114 113913271 -31676017 + MIR SINE MIR 51 206 -56 290 276 186 7 chr10 113913563 113913708 -31675580 - MER112 DNA MER1_type -26 234 64 754 181 113 140 chr10 113913845 113914209 -31675079 - HsTC2 DNA Tc2 -79 1819 1290 327 203 0 14 chr10 113914265 113914334 -31674954 - HsTC2 DNA Tc2 -1830 68 1 527 292 50 27 chr10 113914366 113914384 -31674904 + MIR SINE MIR 27 43 -219 5486 82 132 0 chr10 113914384 113915114 -31674174 + LTR12 LTR ERV1 1 826 0 527 292 50 27 chr10 113915114 113915314 -31673974 + MIR SINE MIR 43 250 -12 636 258 35 5 chr10 113915794 113915992 -31673296 - L1ME3A LINE L1 -224 5946 5743 487 127 0 38 chr10 113916023 113916102 -31673186 - AluSp/q SINE Alu -6 307 232 2843 118 39 7 chr10 113916232 113916663 -31672625 - LTR56 LTR ERV1 0 445 1 609 216 36 52 chr10 113917113 113917204 -31672084 - MIR SINE MIR -2 260 169 3806 108 49 0 chr10 113917204 113917732 -31671556 + MER41C LTR ERV1 1 554 0 609 216 36 52 chr10 113917732 113917834 -31671454 - MIR SINE MIR -93 169 70 1347 172 49 52 chr10 113917835 113918223 -31671065 + MLT1C LTR MaLR 1 467 0 3182 133 83 51 chr10 113918565 113919157 -31670131 - LTR36 LTR ERV1 0 611 1 1638 181 52 47 chr10 113919401 113920070 -31669218 - MER4A LTR ERV1 0 695 1 211 189 0 0 chr10 113920437 113920474 -31668814 + GA-rich Low_complexity Low_complexity 4 40 0 227 217 29 29 chr10 113921088 113921157 -31668131 - MIR3 SINE MIR -46 162 94 239 292 125 17 chr10 113921897 113922017 -31667271 - MLT1K LTR MaLR -10 578 446 1961 171 0 0 chr10 113922951 113923249 -31666039 - AluJb SINE Alu -14 298 1 490 284 194 35 chr10 113923591 113923901 -31665387 - L2 LINE L2 -76 3237 2879 3424 167 67 25 chr10 113923901 113924203 -31665085 + L1MB1 LINE L1 5039 5327 -841 1463 139 146 15 chr10 113924203 113924470 -31664818 + AluJb SINE Alu 1 302 -10 3424 167 67 25 chr10 113924470 113925058 -31664230 + L1MB1 LINE L1 5327 5972 -196 200 317 186 43 chr10 113925552 113925924 -31663364 + L2 LINE L2 2807 3231 -41 * 585 239 139 11 chr10 113925902 113926082 -31663206 + MIR SINE MIR 43 245 -17 223 365 0 0 chr10 113926685 113926781 -31662507 - L2 LINE L2 -429 2885 2790 725 236 28 157 chr10 113927561 113928037 -31661251 + LTR67 LTR ERVL 85 486 -71 2153 121 0 3 chr10 113928037 113928334 -31660954 + AluSx SINE Alu 1 296 -16 725 236 28 157 chr10 113928334 113928392 -31660896 + LTR67 LTR ERVL 486 550 -7 24 0 0 0 chr10 113929019 113929043 -31660245 + AT_rich Low_complexity Low_complexity 1 24 0 983 233 75 56 chr10 113929301 113929769 -31659519 - L1M4 LINE L1 -2082 4064 3588 294 242 42 17 chr10 113929794 113929914 -31659374 - L1M4 LINE L1 -2614 3532 3410 1409 120 21 54 chr10 113930243 113930485 -31658803 - Tigger5 DNA MER2_type 0 2323 2090 972 178 168 14 chr10 113930501 113930709 -31658579 - Tigger5 DNA MER2_type -2080 243 4 21 57 0 0 chr10 113930711 113930746 -31658542 + AT_rich Low_complexity Low_complexity 1 35 0 1747 211 167 7 chr10 113930746 113931483 -31657805 - L1ME3A LINE L1 -30 6140 5190 1952 113 18 0 chr10 113932071 113932353 -31656935 + AluSx SINE Alu 11 297 -15 23 33 0 0 chr10 113932724 113932754 -31656534 + AT_rich Low_complexity Low_complexity 1 30 0 2057 80 42 7 chr10 113933289 113933577 -31655711 - AluSp SINE Alu -15 298 1 225 212 61 111 chr10 113934012 113934111 -31655177 - MIR SINE MIR -56 152 100 317 221 234 39 chr10 113934248 113934402 -31654886 - MER5A DNA MER1_type -3 186 3 453 265 110 56 chr10 113935319 113935536 -31653752 - MIR SINE MIR 0 262 34 2454 40 0 0 chr10 113935622 113935919 -31653369 - AluY SINE Alu -14 297 1 21 36 0 0 chr10 113936087 113936115 -31653173 + AT_rich Low_complexity Low_complexity 1 28 0 522 315 171 9 chr10 113937015 113937231 -31652057 - MIR SINE MIR -11 251 1 928 241 92 25 chr10 113937487 113937636 -31651652 + MER58B DNA MER1_type 1 139 -2281 1189 144 33 9 chr10 113937636 113937851 -31651437 + L1MC1 LINE L1 6112 6331 -2 928 241 92 25 chr10 113937851 113938017 -31651271 + MER58B DNA MER1_type 139 337 -4 446 274 70 55 chr10 113938044 113938194 -31651094 + MIR SINE MIR 7 162 -100 2518 45 3 0 chr10 113938194 113938502 -31650786 - AluY SINE Alu -2 309 1 446 274 70 55 chr10 113938502 113938552 -31650736 + MIR SINE MIR 162 210 -52 289 309 85 12 chr10 113939304 113939469 -31649819 + MIR SINE MIR 37 214 -48 313 154 0 0 chr10 113939847 113939899 -31649389 - MER96 DNA MER1_type? -1 174 123 513 286 133 36 chr10 113941224 113941472 -31647816 + L2 LINE L2 3041 3312 -1 989 161 4 124 chr10 113941978 113942227 -31647061 - MER20 DNA MER1_type 0 219 1 722 157 0 0 chr10 113942252 113942360 -31646928 - FLAM_C SINE Alu -34 109 2 642 217 121 0 chr10 113942547 113942704 -31646584 - MIR SINE MIR -10 252 77 283 306 120 60 chr10 113942827 113942884 -31646404 + MIR SINE MIR 15 67 -195 2063 93 24 7 chr10 113942884 113943175 -31646113 - AluSq SINE Alu -17 296 1 283 306 120 60 chr10 113943175 113943300 -31645988 + MIR SINE MIR 67 208 -54 2254 93 3 0 chr10 113944069 113944370 -31644918 - AluSx SINE Alu -10 302 1 770 293 21 0 chr10 113944521 113944712 -31644576 - MIR SINE MIR -2 260 66 1749 152 17 20 chr10 113945479 113945781 -31643507 + AluJb SINE Alu 10 310 -2 822 283 30 70 chr10 113945782 113946181 -31643107 - MLT1J LTR MaLR -98 413 31 359 260 70 10 chr10 113946585 113946685 -31642603 + MIR SINE MIR 42 147 -61 256 333 19 19 chr10 113947178 113947283 -31642005 - MIR SINE MIR -27 235 131 358 298 83 44 chr10 113947492 113947720 -31641568 - L2 LINE L2 -384 2930 2694 818 119 0 0 chr10 113947727 113947845 -31641443 + AluSg/x SINE Alu 193 310 0 1754 187 0 3 chr10 113947860 113948170 -31641118 + AluJo SINE Alu 1 309 -3 573 257 0 64 chr10 113948537 113948708 -31640580 + MER63 DNA MER1_type 2 787 -275 1708 179 0 0 chr10 113948933 113949235 -31640053 + AluJo SINE Alu 1 302 -10 207 196 0 0 chr10 113949609 113949655 -31639633 + (TTTG)n Simple_repeat Simple_repeat 3 48 0 1813 175 0 0 chr10 113949671 113949963 -31639325 + AluJb SINE Alu 5 296 -16 914 190 0 6 chr10 113950857 113951020 -31638268 - FRAM SINE Alu -2 164 3 1674 154 0 59 chr10 113951050 113951355 -31637933 - AluJb SINE Alu -23 289 3 2043 191 108 27 chr10 113951679 113952160 -31637128 - L1MB7 LINE L1 -17 6167 5648 34 42 0 0 chr10 113952375 113952423 -31636865 + AT_rich Low_complexity Low_complexity 1 48 0 614 154 47 77 chr10 113952424 113952593 -31636695 - L1ME4a LINE L1 -2 6119 5956 1640 174 3 10 chr10 113952652 113952945 -31636343 - AluJo SINE Alu -21 291 1 302 303 85 12 chr10 113953002 113953167 -31636121 + L1MC4a LINE L1 5702 5878 -1930 2358 63 0 10 chr10 113953477 113953779 -31635509 - AluY SINE Alu -12 299 1 760 297 30 36 chr10 113953779 113954109 -31635179 - L1ME4a LINE L1 -292 5829 5502 300 330 32 60 chr10 113954179 113954364 -31634924 - L1ME4a LINE L1 -885 5448 5269 1918 150 13 3 chr10 113954678 113954985 -31634303 - AluJb SINE Alu -2 310 1 7114 74 15 10 chr10 113955356 113955813 -31633475 + L1MA1 LINE L1 5327 5780 -522 2192 115 3 0 chr10 113955813 113956118 -31633170 + AluSx SINE Alu 1 306 -6 7114 74 15 10 chr10 113956118 113956631 -31632657 + L1MA1 LINE L1 5780 6302 0 668 111 0 37 chr10 113957789 113957897 -31631391 - AluJo SINE Alu -5 307 204 * 854 185 13 7 chr10 113957895 113958046 -31631242 - AluJo SINE Alu -159 153 2 1828 149 24 0 chr10 113958056 113958345 -31630943 - AluJb SINE Alu -16 296 1 834 163 7 0 chr10 113959009 113959150 -31630138 - FLAM_C SINE Alu 0 143 2 1242 136 48 68 chr10 113959153 113959403 -31629885 - AluJb SINE Alu -8 304 60 251 299 0 15 chr10 113959860 113959927 -31629361 + MIR3 SINE MIR 136 201 -7 199 326 35 35 chr10 113960151 113960237 -31629051 - MER5A DNA MER1_type -97 92 7 341 303 28 45 chr10 113961156 113961334 -31627954 - MIR SINE MIR -74 188 14 1678 135 59 33 chr10 113961930 113962234 -31627054 + AluJb SINE Alu 1 312 0 2022 108 23 0 chr10 113962362 113962667 -31626621 - AluSp SINE Alu 0 313 2 181 358 32 21 chr10 113964092 113964187 -31625101 + MIR3 SINE MIR 13 108 -100 21 57 0 0 chr10 113964418 113964453 -31624835 + AT_rich Low_complexity Low_complexity 1 35 0 1540 181 10 7 chr10 113965064 113965356 -31623932 - AluJo SINE Alu -9 303 11 292 234 53 32 chr10 113965926 113966020 -31623268 - L2 LINE L2 -4 3268 3173 798 162 0 42 chr10 113967324 113967466 -31621822 - FLAM_C SINE Alu -5 138 3 2211 154 8 13 chr10 113967519 113967896 -31621392 - THE1C LTR MaLR 0 375 1 2031 135 73 22 chr10 113968190 113968527 -31620761 + MSTA LTR MaLR 1 358 -70 1994 77 4 18 chr10 113968527 113968799 -31620489 - L1PA12 LINE L1 0 6168 5901 2031 135 73 22 chr10 113968799 113968816 -31620472 + MSTA LTR MaLR 358 373 -55 3678 135 40 2 chr10 113968816 113969386 -31619902 + MSTA-int LTR MaLR 127 718 -933 540 270 106 5 chr10 113970020 113970209 -31619079 + MIR SINE MIR 10 217 -45 2919 148 8 12 chr10 113970558 113971044 -31618244 - MER31A LTR ERV1 0 485 2 342 206 0 0 chr10 113971610 113971683 -31617605 + (TG)n Simple_repeat Simple_repeat 1 73 0 695 255 123 9 chr10 113972067 113972279 -31617009 - MIR SINE MIR -14 248 13 263 344 43 12 chr10 113972278 113972441 -31616847 + L2 LINE L2 3073 3240 -32 * 210 37 0 0 chr10 113972459 113972486 -31616802 + (TGGA)n Simple_repeat Simple_repeat 4 30 0 525 277 99 60 chr10 113972967 113973206 -31616082 - MIR SINE MIR -15 247 3 563 244 106 64 chr10 113974729 113974895 -31614393 + L1ME4a LINE L1 5634 5792 -329 234 0 0 0 chr10 113974895 113974921 -31614367 + (TA)n Simple_repeat Simple_repeat 2 27 0 1940 136 3 13 chr10 113974921 113975223 -31614065 - AluJb SINE Alu -13 299 1 563 244 106 64 chr10 113975223 113975419 -31613869 + L1ME4a LINE L1 5791 6023 -98 349 295 29 36 chr10 113975935 113976074 -31613214 + L2 LINE L2 2716 2853 -461 703 258 46 16 chr10 113976102 113976296 -31612992 + MIR SINE MIR 42 241 -21 200 288 216 39 chr10 113976416 113976569 -31612719 - MER5A DNA MER1_type 0 189 10 183 233 82 55 chr10 113976944 113977017 -31612271 + MER5B DNA MER1_type 7 81 -97 957 262 80 34 chr10 113981845 113982372 -31606916 + MLT1K LTR MaLR 2 588 0 520 270 97 34 chr10 113982410 113982647 -31606641 + MIR SINE MIR 1 252 -10 562 147 21 0 chr10 113982933 113983028 -31606260 + MER5A DNA MER1_type 10 106 -83 563 249 124 11 chr10 113984282 113984467 -31604821 + MIR SINE MIR 20 225 -37 359 335 25 19 chr10 113984727 113984888 -31604400 + MIR SINE MIR 77 238 -24 2477 98 32 3 chr10 113985379 113985755 -31603533 + MER4D LTR ERV1 58 444 -459 2500 164 28 54 chr10 113985755 113986125 -31603163 + MER4D LTR ERV1 370 723 -180 2104 106 21 0 chr10 113986125 113986407 -31602881 - AluSx SINE Alu -10 302 15 2500 164 28 54 chr10 113986407 113986572 -31602716 + MER4D LTR ERV1 723 891 -12 361 270 45 124 chr10 113987222 113987489 -31601799 - MIR SINE MIR -12 250 5 757 196 87 12 chr10 113987992 113988165 -31601123 + MER5A DNA MER1_type 1 186 -3 195 289 0 0 chr10 113988639 113988684 -31600604 - MIR SINE MIR -62 146 102 350 320 41 14 chr10 113988812 113988959 -31600329 - MIR SINE MIR -4 258 108 222 298 0 0 chr10 113989966 113990023 -31599265 + GA-rich Low_complexity Low_complexity 2 58 0 533 262 103 52 chr10 113990255 113990526 -31598762 - MER102a DNA MER1_type -3 327 43 1910 172 0 10 chr10 113990526 113990834 -31598454 + AluSx SINE Alu 3 307 -5 200 163 20 61 chr10 113991069 113991118 -31598170 - MIR SINE MIR 0 262 216 760 233 102 37 chr10 113992219 113992646 -31596642 + MLT1D LTR MaLR 4 467 0 255 345 43 0 chr10 113993340 113993456 -31595832 - MIR SINE MIR -62 200 80 215 230 68 40 chr10 113993534 113993608 -31595680 + L2 LINE L2 3154 3229 -43 366 123 0 0 chr10 113994625 113994682 -31594606 + (CA)n Simple_repeat Simple_repeat 1 57 0 188 289 0 0 chr10 113995076 113995121 -31594167 + L2 LINE L2 3268 3312 -1 312 270 0 0 chr10 113995290 113995353 -31593935 + MIR SINE MIR 17 79 -183 587 213 239 16 chr10 113996288 113996489 -31592799 - MIR SINE MIR -12 250 9 391 285 174 15 chr10 113997606 113997803 -31591485 + MIR SINE MIR 17 239 -23 424 280 90 55 chr10 113999514 113999714 -31589574 - MIR SINE MIR -32 230 24 745 174 18 66 chr10 114001408 114001575 -31587713 + MIR SINE MIR 102 260 -2 352 260 44 181 chr10 114001573 114001800 -31587488 + MER91A DNA MER1_type 1 196 0 * 423 165 40 131 chr10 114002119 114002295 -31586993 - FAM SINE Alu -24 161 2 599 147 157 96 chr10 114002338 114002535 -31586753 + MER4C LTR ERV1 1 209 -256 198 103 0 0 chr10 114003076 114003105 -31586183 + (T)n Simple_repeat Simple_repeat 1 29 0 2153 50 71 14 chr10 114004497 114004779 -31584509 - AluSp SINE Alu -15 298 1 197 281 0 47 chr10 114004887 114004951 -31584337 - MIR SINE MIR -94 168 108 192 288 154 24 chr10 114005756 114005920 -31583368 + L2 LINE L2 2791 2981 -291 188 352 9 38 chr10 114006006 114006111 -31583177 + L2 LINE L2 2980 3081 -191 646 288 32 47 chr10 114006392 114006732 -31582556 + L1MEd LINE L1 282 616 -5503 32 57 0 0 chr10 114006815 114006868 -31582420 + AT_rich Low_complexity Low_complexity 1 53 0 618 321 32 25 chr10 114006868 114007145 -31582143 + L1MEd LINE L1 680 958 -5161 22 35 0 0 chr10 114007231 114007260 -31582028 + AT_rich Low_complexity Low_complexity 1 29 0 508 302 103 50 chr10 114007260 114007561 -31581727 + L1M4 LINE L1 3806 4122 -2024 554 242 66 69 chr10 114007723 114008041 -31581247 - L1MC/D LINE L1 -498 5623 5304 1999 129 9 47 chr10 114008140 114008458 -31580830 + AluSx SINE Alu 1 306 -6 339 260 211 0 chr10 114008881 114008985 -31580303 - MIR3 SINE MIR -16 192 67 339 266 159 0 chr10 114008987 114009100 -31580188 - MIR SINE MIR 0 262 132 278 212 11 120 chr10 114009125 114009309 -31579979 + MER112 DNA MER1_type 41 204 -56 1730 174 31 3 chr10 114009339 114009632 -31579656 - AluJb SINE Alu -11 301 1 276 140 60 0 chr10 114009894 114009944 -31579344 - L2 LINE L2 0 3313 3261 905 219 11 0 chr10 114009950 114010133 -31579155 + MER58A DNA MER1_type 1 185 -39 2223 118 3 0 chr10 114010460 114010757 -31578531 + AluSx SINE Alu 6 303 -9 369 287 203 47 chr10 114011116 114011416 -31577872 - L2 LINE L2 -3 3269 2923 24 0 0 0 chr10 114011491 114011515 -31577773 + AT_rich Low_complexity Low_complexity 1 24 0 2065 185 59 10 chr10 114011518 114011924 -31577364 - MSTB LTR MaLR 0 426 1 1265 167 13 40 chr10 114011929 114012157 -31577131 - AluJo SINE Alu -4 308 87 2392 99 0 0 chr10 114012223 114012525 -31576763 - AluSx SINE Alu -10 302 1 21 0 0 0 chr10 114013266 114013287 -31576001 + AT_rich Low_complexity Low_complexity 1 21 0 186 401 30 8 chr10 114014264 114014396 -31574892 + L2 LINE L2 2919 3053 -219 362 347 72 63 chr10 114014430 114014486 -31574802 - L2 LINE L2 -4 3268 3214 1666 147 72 100 chr10 114014486 114014554 -31574734 - MLT1B LTR MaLR 0 390 322 2179 115 0 3 chr10 114014554 114014840 -31574448 + AluSx SINE Alu 1 285 -27 1666 147 72 100 chr10 114014840 114014851 -31574437 - MLT1B LTR MaLR -68 322 312 266 0 29 0 chr10 114014851 114014885 -31574403 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 1666 147 72 100 chr10 114014885 114015205 -31574083 - MLT1B LTR MaLR -78 312 1 362 347 72 63 chr10 114015205 114015609 -31573679 - L2 LINE L2 -58 3214 2804 226 342 8 68 chr10 114015719 114015836 -31573452 + L2 LINE L2 3161 3270 -2 604 284 109 38 chr10 114016938 114017459 -31571829 + L1ME3A LINE L1 4625 5182 -964 550 286 29 33 chr10 114017509 114017719 -31571569 + L1ME3A LINE L1 5272 5480 -2328 309 271 0 0 chr10 114017724 114017794 -31571494 + MIR SINE MIR 183 252 -10 330 304 174 7 chr10 114018041 114018179 -31571109 - MER91A DNA MER1_type -17 179 19 367 355 29 25 chr10 114018193 114018469 -31570819 + L1ME3A LINE L1 5609 5885 -285 913 209 23 0 chr10 114020281 114020453 -31568835 - MER45A DNA AcHobo 0 178 3 261 227 0 67 chr10 114021187 114021262 -31568026 + L2 LINE L2 3203 3272 0 184 297 0 47 chr10 114022116 114022180 -31567108 + L2 LINE L2 2726 2786 -528 193 328 33 57 chr10 114022395 114022517 -31566771 + L2 LINE L2 3195 3313 0 360 113 0 0 chr10 114022576 114022629 -31566659 - MLT1B LTR MaLR 0 390 338 * 515 130 157 0 chr10 114022625 114022740 -31566548 - MLT1C LTR MaLR -332 135 3 267 273 16 62 chr10 114023157 114023285 -31566003 - MIR SINE MIR -1 261 140 210 229 33 0 chr10 114023287 114023348 -31565940 + (TA)n Simple_repeat Simple_repeat 2 64 0 343 313 45 9 chr10 114023352 114023464 -31565824 + L1MC4 LINE L1 6588 6703 -1339 * 365 272 0 22 chr10 114023398 114023490 -31565798 - L1MC4 LINE L1 -1339 6703 6614 312 277 21 64 chr10 114023438 114023532 -31565756 + L1MC4 LINE L1 6614 6703 -1339 * 358 283 0 22 chr10 114023504 114023596 -31565692 - L1MC4 LINE L1 -1339 6703 6614 351 326 0 0 chr10 114023565 114023654 -31565634 + L1MC4 LINE L1 6615 6703 -1339 * 415 208 0 62 chr10 114023638 114023734 -31565554 - L1MC4 LINE L1 -1339 6703 6614 369 322 0 0 chr10 114023658 114023748 -31565540 + L1MC4 LINE L1 6614 6703 -1339 * 2298 102 23 0 chr10 114025110 114025413 -31563875 + AluSx SINE Alu 1 310 -2 2828 96 7 51 chr10 114025832 114026084 -31563204 - MSTA LTR MaLR 0 428 203 3337 71 40 2 chr10 114026084 114026536 -31562752 - L1PA12 LINE L1 -15 6153 5685 2828 96 7 51 chr10 114026536 114026731 -31562557 - MSTA LTR MaLR -225 203 1 21 0 0 0 chr10 114027039 114027060 -31562228 + AT_rich Low_complexity Low_complexity 1 21 0 1081 183 0 0 chr10 114027269 114027438 -31561850 - FRAM SINE Alu -6 170 2 544 294 106 43 chr10 114028018 114028635 -31560653 + L2 LINE L2 2315 3024 -248 217 308 150 53 chr10 114028787 114028920 -31560368 + L2 LINE L2 3122 3267 -5 408 55 0 0 chr10 114030017 114030072 -31559216 + (CA)n Simple_repeat Simple_repeat 2 56 0 24 0 0 0 chr10 114030092 114030116 -31559172 + AT_rich Low_complexity Low_complexity 1 24 0 24 0 0 0 chr10 114030809 114030833 -31558455 + AT_rich Low_complexity Low_complexity 1 24 0 1390 219 35 32 chr10 114031822 114032160 -31557128 - L1ME3A LINE L1 0 6170 5829 1051 192 20 0 chr10 114032160 114032363 -31556925 - MER3 DNA MER1_type -1 208 2 1390 219 35 32 chr10 114032363 114032425 -31556863 - L1ME3A LINE L1 -341 5829 5769 2120 130 36 0 chr10 114032447 114032748 -31556540 - AluSx SINE Alu 0 312 1 2316 104 48 28 chr10 114035866 114036223 -31553065 - THE1B LTR MaLR 0 364 1 26 30 0 0 chr10 114036253 114036286 -31553002 + AT_rich Low_complexity Low_complexity 1 33 0 274 228 51 36 chr10 114037184 114037312 -31551976 + MIR SINE MIR 19 241 -21 22 0 0 0 chr10 114037357 114037379 -31551909 + AT_rich Low_complexity Low_complexity 1 22 0 185 333 0 28 chr10 114037388 114037460 -31551828 + MIR3 SINE MIR 2 71 -137 2362 115 0 0 chr10 114037660 114037972 -31551316 + AluSx SINE Alu 1 312 0 223 241 121 0 chr10 114038080 114038138 -31551150 - L2 LINE L2 -1 3312 3248 565 271 35 97 chr10 114038539 114038941 -31550347 + L1ME4a LINE L1 4214 4560 -1586 1549 151 13 84 chr10 114038941 114039239 -31550049 + AluJo SINE Alu 1 277 -35 565 271 35 97 chr10 114039239 114039499 -31549789 + L1ME4a LINE L1 4560 4835 -1311 1739 139 79 50 chr10 114039767 114040070 -31549218 + AluJb SINE Alu 1 312 0 350 258 101 54 chr10 114040096 114040624 -31548664 + L1ME4a LINE L1 5315 5904 -217 249 208 0 0 chr10 114040806 114040878 -31548410 + (TA)n Simple_repeat Simple_repeat 1 72 0 766 105 0 35 chr10 114041022 114041136 -31548152 + AluSx SINE Alu 1 110 -203 5575 62 15 30 chr10 114041138 114041915 -31547373 - MER4E LTR ERV1 0 766 1 1467 93 10 24 chr10 114041915 114042120 -31547168 + AluSx SINE Alu 107 308 -2 270 295 89 27 chr10 114042145 114042257 -31547031 + MIR SINE MIR 57 175 -87 267 268 116 58 chr10 114043645 114043783 -31545505 + L2 LINE L2 3158 3303 -10 344 264 11 23 chr10 114044513 114044600 -31544688 + MER5A DNA MER1_type 61 146 -43 2402 180 50 0 chr10 114044640 114045140 -31544148 - L1MB5 LINE L1 -47 6127 5603 643 272 61 14 chr10 114045249 114045462 -31543826 + MIR SINE MIR 16 238 -24 536 216 8 16 chr10 114046323 114046448 -31542840 + FLAM_C SINE Alu 19 142 -1 1831 158 0 3 chr10 114046456 114046781 -31542507 + AluJb SINE Alu 1 324 0 380 253 145 67 chr10 114047591 114047860 -31541428 - MLT1I LTR MaLR -20 389 100 1701 156 85 20 chr10 114048150 114048502 -31540786 + THE1C LTR MaLR 1 375 0 464 363 99 57 chr10 114048698 114049012 -31540276 + L2 LINE L2 2946 3272 0 270 0 0 0 chr10 114049343 114049373 -31539915 + (CA)n Simple_repeat Simple_repeat 2 31 0 290 290 104 27 chr10 114049507 114049804 -31539484 + L1ME4a LINE L1 5607 5926 -195 275 191 12 60 chr10 114050164 114050248 -31539040 - MER116 DNA Mariner 0 80 1 873 122 8 0 chr10 114051124 114051247 -31538041 + FLAM_C SINE Alu 1 124 -19 243 279 0 49 chr10 114051556 114051678 -31537610 + L1ME4a LINE L1 5962 6077 -44 2319 112 3 0 chr10 114051685 114051997 -31537291 + AluSq SINE Alu 1 313 0 364 200 23 100 chr10 114053873 114054003 -31535285 - MIR SINE MIR -1 261 142 285 299 84 0 chr10 114055248 114055355 -31533933 + L2 LINE L2 3157 3272 0 445 277 69 5 chr10 114055398 114055586 -31533702 + L1MC4a LINE L1 3631 3830 -2316 840 297 25 3 chr10 114055602 114055950 -31533338 + L1MC4a LINE L1 5531 5824 -297 481 282 115 6 chr10 114056039 114056213 -31533075 + MIR SINE MIR 70 262 0 24 32 0 0 chr10 114056405 114056436 -31532852 + AT_rich Low_complexity Low_complexity 1 31 0 2406 83 3 3 chr10 114058229 114058530 -31530758 - AluSx SINE Alu -11 301 1 879 37 0 0 chr10 114061959 114062066 -31527222 + (GA)n Simple_repeat Simple_repeat 1 107 0 262 326 73 55 chr10 114063485 114063663 -31525625 + L2 LINE L2 2791 2973 -299 431 284 46 7 chr10 114063890 114064028 -31525260 + MIR SINE MIR 9 156 -102 234 0 0 0 chr10 114064765 114064791 -31524497 + (TG)n Simple_repeat Simple_repeat 2 27 0 322 374 61 0 chr10 114065244 114065407 -31523881 - L2 LINE L2 0 3272 3100 446 177 0 0 chr10 114065414 114065493 -31523795 + U13 snRNA snRNA 26 104 0 1946 160 0 0 chr10 114065749 114066036 -31523252 - AluSx SINE Alu -25 287 1 293 221 15 59 chr10 114066134 114066202 -31523086 + L2 LINE L2 3246 3310 -3 447 206 40 24 chr10 114067377 114067503 -31521785 - L1ME4a LINE L1 -5 6116 5989 314 292 22 11 chr10 114067688 114067777 -31521511 + MIR SINE MIR 34 123 -139 479 258 90 26 chr10 114068343 114068498 -31520790 + MER5B DNA MER1_type 7 171 -7 2294 114 19 30 chr10 114068649 114069017 -31520271 + THE1B LTR MaLR 1 364 0 2373 64 41 0 chr10 114070189 114070484 -31518804 - AluY SINE Alu -2 309 3 182 36 0 36 chr10 114070580 114070608 -31518680 + (TTTTTA)n Simple_repeat Simple_repeat 2 28 0 1785 145 52 3 chr10 114071418 114071707 -31517581 + AluJo SINE Alu 1 303 -9 436 345 73 10 chr10 114071753 114071959 -31517329 + MIR SINE MIR 8 226 -36 288 137 0 0 chr10 114072875 114072926 -31516362 + (CAT)n Simple_repeat Simple_repeat 3 53 0 243 298 229 15 chr10 114073050 114073255 -31516033 + MIR SINE MIR 14 262 0 189 0 0 0 chr10 114073281 114073302 -31515986 + (TTAA)n Simple_repeat Simple_repeat 3 23 0 2205 92 11 0 chr10 114073302 114073585 -31515703 - AluSx SINE Alu -26 286 1 401 291 43 43 chr10 114073792 114073933 -31515355 + MIR SINE MIR 14 154 -108 235 272 62 12 chr10 114074065 114074146 -31515142 - MIR SINE MIR -157 105 21 1137 259 113 85 chr10 114074149 114074406 -31514882 - L1MEc LINE L1 -2888 3327 3079 1829 179 0 3 chr10 114074406 114074702 -31514586 + AluJo SINE Alu 1 295 -17 1137 259 113 85 chr10 114074702 114075422 -31513866 - L1MEc LINE L1 -3136 3079 2322 390 345 31 21 chr10 114075904 114076095 -31513193 - L1MEc LINE L1 -4584 1812 1620 331 286 24 42 chr10 114076110 114076278 -31513010 - HAL1 LINE L1 -939 1568 1404 1999 268 77 47 chr10 114076389 114076515 -31512773 - L1MEc LINE L1 -4969 1236 1115 1974 103 0 0 chr10 114076515 114076797 -31512491 - AluSx SINE Alu 0 314 33 1999 268 77 47 chr10 114076797 114077783 -31511505 - L1MEc LINE L1 -5090 1115 89 267 163 102 0 chr10 114077803 114077852 -31511436 + MIR SINE MIR 122 175 -87 23 54 0 0 chr10 114077901 114077938 -31511350 + AT_rich Low_complexity Low_complexity 1 37 0 281 268 93 0 chr10 114078330 114078427 -31510861 + L2 LINE L2 3145 3250 -22 373 328 52 90 chr10 114078439 114078729 -31510559 + L2 LINE L2 2978 3256 -16 398 20 20 0 chr10 114079289 114079340 -31509948 + (CAT)n Simple_repeat Simple_repeat 2 53 0 319 268 121 19 chr10 114079758 114079915 -31509373 - Charlie8 DNA MER1_type -2243 174 2 1682 47 0 14 chr10 114080252 114080464 -31508824 - AluY SINE Alu -5 306 98 328 303 79 36 chr10 114080756 114081060 -31508228 - LTR16C LTR ERVL 0 491 175 220 250 0 0 chr10 114081496 114081544 -31507744 - MIR SINE MIR -2 260 213 548 289 80 22 chr10 114082232 114082457 -31506831 - MIR SINE MIR -11 251 14 333 262 221 13 chr10 114082563 114082712 -31506576 + MER5A DNA MER1_type 9 188 -1 435 362 31 4 chr10 114082751 114082980 -31506308 + MIR SINE MIR 15 249 -13 186 296 8 128 chr10 114083367 114083492 -31505796 - MIR SINE MIR -95 167 58 1487 233 27 12 chr10 114083499 114083834 -31505454 + MER58B DNA MER1_type 1 340 -1 2389 85 0 0 chr10 114083856 114084163 -31505125 + AluY SINE Alu 1 307 -4 432 252 68 0 chr10 114085303 114085406 -31503882 + MIR SINE MIR 132 241 -21 225 209 0 0 chr10 114085569 114085612 -31503676 - MIR SINE MIR -114 148 106 858 161 0 0 chr10 114086113 114086250 -31503038 + L1PA15 LINE L1 6029 6165 0 2025 139 0 16 chr10 114086326 114086642 -31502646 - AluJo SINE Alu -1 311 1 533 312 94 13 chr10 114087227 114087461 -31501827 + MIR SINE MIR 10 262 0 1990 113 47 4 chr10 114087493 114087799 -31501489 + AluSx SINE Alu 1 318 0 789 248 69 83 chr10 114087991 114088423 -31500865 - MLT1H LTR MaLR -1 548 123 189 252 70 113 chr10 114089592 114089707 -31499581 - L3b LINE CR1 -9 1574 1465 533 288 91 14 chr10 114090516 114090735 -31498553 + MIR SINE MIR 2 237 -25 180 301 0 55 chr10 114090845 114090918 -31498370 - L2 LINE L2 -339 2974 2906 509 242 98 0 chr10 114091157 114091289 -31497999 - MIR SINE MIR -78 184 40 1696 168 13 23 chr10 114091542 114091846 -31497442 + AluJb SINE Alu 1 301 -11 231 261 0 15 chr10 114091997 114092062 -31497226 + C-rich Low_complexity Low_complexity 2 65 0 182 0 107 0 chr10 114092122 114092150 -31497138 + A-rich Low_complexity Low_complexity 2 32 0 22 0 0 0 chr10 114092181 114092203 -31497085 + AT_rich Low_complexity Low_complexity 1 22 0 343 277 131 24 chr10 114092315 114092521 -31496767 - L1 LINE L1 -1786 4360 4133 1405 181 73 3 chr10 114096309 114096612 -31492676 - MER33 DNA MER1_type 0 324 1 303 321 164 8 chr10 114096776 114096910 -31492378 - L2 LINE L2 -3 3269 3115 333 263 106 46 chr10 114097396 114097679 -31491609 - L1ME2 LINE L1 -226 5938 5631 890 300 37 37 chr10 114097839 114098097 -31491191 + L1ME LINE L1 5258 5518 -603 2262 106 0 0 chr10 114098097 114098390 -31490898 - AluSc SINE Alu -16 293 1 890 300 37 37 chr10 114098390 114098591 -31490697 + L1ME LINE L1 5517 5717 -404 1524 196 23 0 chr10 114098691 114098957 -31490331 - AluJo SINE Alu -20 292 21 200 286 65 83 chr10 114098962 114099130 -31490158 - L2 LINE L2 -197 3075 2911 565 225 204 5 chr10 114099616 114099807 -31489481 + MIR SINE MIR 34 262 0 347 203 328 11 chr10 114100455 114100639 -31488649 + MIR SINE MIR 20 256 -6 2032 113 7 7 chr10 114100789 114101071 -31488217 + AluSx SINE Alu 1 282 -30 255 327 170 45 chr10 114101209 114101591 -31487697 + L2 LINE L2 2046 2475 -839 270 193 48 0 chr10 114101782 114101865 -31487423 + Charlie7 DNA MER1_type 2436 2522 -90 2342 171 62 2 chr10 114101937 114102341 -31486947 - MSTA LTR MaLR 0 428 1 722 249 34 0 chr10 114102648 114102825 -31486463 + MIR SINE MIR 49 231 -31 266 224 161 83 chr10 114103523 114103728 -31485560 + L1P5 LINE L1 5257 5477 -674 752 190 28 21 chr10 114103734 114103876 -31485412 - MLT1E1 LTR MaLR 0 654 512 2857 22 0 0 chr10 114103907 114104264 -31485024 - AluYb8 SINE Alu 0 357 1 619 248 86 116 chr10 114104284 114104913 -31484375 + L1ME3A LINE L1 5561 6170 0 752 172 0 60 chr10 114105185 114105346 -31483942 + AluJb SINE Alu 174 312 0 2546 27 0 10 chr10 114105417 114105711 -31483577 - AluY SINE Alu -20 291 1 2134 118 0 0 chr10 114106612 114106892 -31482396 - AluSx SINE Alu -32 280 1 2307 104 0 0 chr10 114107897 114108195 -31481093 + AluSg SINE Alu 1 298 -12 2051 151 0 0 chr10 114110630 114110942 -31478346 + AluJo SINE Alu 1 312 0 1316 166 72 91 chr10 114112600 114112907 -31476381 - AluJo SINE Alu -11 301 1 387 0 0 0 chr10 114116259 114116302 -31472986 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 823 163 8 0 chr10 114116309 114116432 -31472856 - FLAM_C SINE Alu -18 125 2 414 255 106 35 chr10 114117024 114117165 -31472123 + MER5A DNA MER1_type 38 188 -1 234 198 9 144 chr10 114117289 114117336 -31471952 - Charlie7 DNA MER1_type 0 2612 2587 1784 144 24 34 chr10 114117336 114117628 -31471660 - AluSx SINE Alu -23 289 1 234 198 9 144 chr10 114117628 114117691 -31471597 - Charlie7 DNA MER1_type -25 2587 2517 22 0 0 0 chr10 114117726 114117748 -31471540 + AT_rich Low_complexity Low_complexity 1 22 0 32 86 0 0 chr10 114117781 114117862 -31471426 + AT_rich Low_complexity Low_complexity 1 81 0 312 250 76 0 chr10 114117890 114117982 -31471306 - Charlie7 DNA MER1_type -2513 99 1 530 144 125 10 chr10 114118219 114118323 -31470965 - MER3 DNA MER1_type -27 182 67 259 297 85 38 chr10 114118503 114118739 -31470549 + L3b LINE CR1 1127 1373 -210 324 0 0 0 chr10 114119351 114119387 -31469901 + (TG)n Simple_repeat Simple_repeat 2 37 0 1130 273 109 5 chr10 114121268 114121708 -31467580 - LTR16C LTR ERVL -2 489 4 234 167 48 0 chr10 114122138 114122180 -31467108 + MIR SINE MIR 24 67 -195 417 191 45 0 chr10 114122192 114122281 -31467007 + MIR SINE MIR 170 262 0 25 51 0 0 chr10 114123552 114123591 -31465697 + AT_rich Low_complexity Low_complexity 1 39 0 330 244 98 0 chr10 114124094 114124176 -31465112 + L1MC4 LINE L1 6613 6702 -1340 4556 135 20 5 chr10 114124292 114124950 -31464338 + L1MA4 LINE L1 5290 5987 -196 2091 136 0 0 chr10 114124950 114125245 -31464043 + AluSx SINE Alu 2 296 -16 4556 135 20 5 chr10 114125245 114125441 -31463847 + L1MA4 LINE L1 5987 6179 -4 253 207 0 35 chr10 114125729 114125787 -31463501 - L2 LINE L2 -7 3265 3210 36 23 0 0 chr10 114126059 114126102 -31463186 + AT_rich Low_complexity Low_complexity 1 43 0 1631 180 20 13 chr10 114126854 114127319 -31461969 + AluJb SINE Alu 3 469 0 323 211 44 56 chr10 114127666 114127756 -31461532 + MIR SINE MIR 66 154 -108 2404 109 0 0 chr10 114127757 114128068 -31461220 + AluY SINE Alu 1 311 0 1575 158 31 4 chr10 114128089 114128349 -31460939 + AluJb SINE Alu 13 279 -33 2396 97 58 25 chr10 114128349 114128709 -31460579 - THE1C LTR MaLR -3 372 1 296 213 213 0 chr10 114128737 114128812 -31460476 + MIR SINE MIR 157 247 -15 3721 135 28 22 chr10 114128861 114129701 -31459587 - L1PB4 LINE L1 -1 6150 5289 659 259 44 51 chr10 114130056 114130330 -31458958 + MER102a DNA MER1_type 44 315 -15 2905 9 0 0 chr10 114130768 114131083 -31458205 + AluYb8 SINE Alu 1 315 -3 187 128 0 43 chr10 114132043 114132090 -31457198 + (GGGA)n Simple_repeat Simple_repeat 1 45 0 241 272 47 83 chr10 114132599 114132768 -31456520 + L2 LINE L2 2658 2820 -494 345 250 13 0 chr10 114132775 114132851 -31456437 + MER94 DNA DNA 56 132 -2 622 277 55 126 chr10 114132863 114133340 -31455948 + L2 LINE L2 2804 3246 -26 1009 228 47 9 chr10 114133757 114133990 -31455298 + MIR SINE MIR 7 248 -14 324 267 23 0 chr10 114134334 114134420 -31454868 + L2 LINE L2 3216 3303 -10 * 762 278 22 107 chr10 114134404 114134959 -31454329 - L2 LINE L2 -11 3261 2750 424 270 63 0 chr10 114134968 114135079 -31454209 - L2 LINE L2 -17 3296 3179 568 262 105 11 chr10 114135142 114135333 -31453955 + MER3 DNA MER1_type 1 209 0 433 291 30 40 chr10 114135606 114135805 -31453483 + MIR SINE MIR 20 216 -46 379 139 47 35 chr10 114135846 114135932 -31453356 - L1ME4a LINE L1 0 6121 6035 1836 253 79 27 chr10 114136087 114136834 -31452454 - L1M4 LINE L1 -2406 3740 2955 890 242 32 18 chr10 114136822 114137107 -31452181 - L1M4 LINE L1 -912 5234 4946 * 2942 125 8 15 chr10 114137102 114137574 -31451714 - L1MA7 LINE L1 -147 6144 5676 643 271 25 10 chr10 114137577 114137776 -31451512 + MIR SINE MIR 53 254 -8 1043 159 0 0 chr10 114138153 114138316 -31450972 - AluSg/x SINE Alu -13 299 137 741 219 18 0 chr10 114138423 114138592 -31450696 - MER5B DNA MER1_type -6 172 1 945 353 95 29 chr10 114138783 114139617 -31449671 + L2 LINE L2 222 1110 -2204 2878 129 140 9 chr10 114139737 114140180 -31449108 - MER61D LTR ERV1 0 501 1 28 0 0 0 chr10 114140266 114140294 -31448994 + AT_rich Low_complexity Low_complexity 1 28 0 773 168 0 36 chr10 114140294 114140431 -31448857 - FLAM_C SINE Alu 0 133 2 381 307 179 21 chr10 114140434 114140854 -31448434 + L2 LINE L2 1519 2004 -1310 1090 202 82 45 chr10 114140854 114141146 -31448142 - L1MD3 LINE L1 -361 7634 7332 791 183 0 0 chr10 114141494 114141625 -31447663 - FLAM_A SINE Alu -1 132 2 582 354 17 4 chr10 114141687 114141924 -31447364 + Charlie8 DNA MER1_type 33 272 -2145 373 378 40 10 chr10 114142014 114142313 -31446975 + L3 LINE CR1 1260 1567 -10 2648 50 0 0 chr10 114145469 114145767 -31443521 + AluY SINE Alu 1 298 -13 528 280 76 40 chr10 114146048 114146323 -31442965 + MLT1K LTR MaLR 141 425 -163 201 182 0 0 chr10 114146323 114146356 -31442932 + GA-rich Low_complexity Low_complexity 1 33 0 595 264 22 6 chr10 114147166 114147344 -31441944 - MIR SINE MIR 0 262 82 1336 259 32 15 chr10 114147921 114148326 -31440962 - LTR16C LTR ERVL 0 491 80 302 0 26 0 chr10 114149874 114149912 -31439376 + (TC)n Simple_repeat Simple_repeat 2 40 0 13303 106 11 10 chr10 114150012 114152418 -31436870 - L1PA10 LINE L1 -337 5831 3424 3373 88 7 5 chr10 114152423 114152866 -31436422 + MLT2A1 LTR ERVL 1 444 0 44910 60 11 7 chr10 114152866 114158377 -31430911 + HERVL-A1 LTR ERVL 1 5537 -117 1351 59 0 6 chr10 114158380 114158550 -31430738 - HERVL-A1 LTR ERVL -5485 169 1 228 31 125 0 chr10 114158550 114158582 -31430706 - MLT2A1 LTR ERVL 0 453 418 236 197 0 14 chr10 114158588 114158651 -31430637 + (TA)n Simple_repeat Simple_repeat 1 64 -6 2140 138 0 3 chr10 114158651 114158947 -31430341 + AluSc SINE Alu 1 295 -14 236 197 0 14 chr10 114158947 114158954 -31430334 + (TA)n Simple_repeat Simple_repeat 64 70 0 2716 73 86 11 chr10 114159013 114159385 -31429903 - MLT2A1 LTR ERVL -44 400 1 1051 215 50 8 chr10 114159385 114159646 -31429642 - L1M4 LINE L1 -2002 4144 3873 2202 251 84 36 chr10 114209650 114210585 -31378703 - L1M4 LINE L1 -2212 3934 2955 890 242 32 18 chr10 114210573 114210858 -31378430 - L1M4 LINE L1 -912 5234 4946 * 2942 125 8 15 chr10 114210853 114211325 -31377963 - L1MA7 LINE L1 -147 6144 5676 643 271 25 10 chr10 114211328 114211527 -31377761 + MIR SINE MIR 53 254 -8 1043 159 0 0 chr10 114211904 114212067 -31377221 - AluSg/x SINE Alu -13 299 137 741 219 18 0 chr10 114212174 114212343 -31376945 - MER5B DNA MER1_type -6 172 1 958 351 95 29 chr10 114212534 114213368 -31375920 + L2 LINE L2 222 1110 -2204 2866 131 140 9 chr10 114213488 114213931 -31375357 - MER61D LTR ERV1 0 501 1 28 0 0 0 chr10 114214017 114214045 -31375243 + AT_rich Low_complexity Low_complexity 1 28 0 773 168 0 36 chr10 114214045 114214182 -31375106 - FLAM_C SINE Alu 0 133 2 381 307 179 21 chr10 114214185 114214605 -31374683 + L2 LINE L2 1519 2004 -1310 1090 202 82 45 chr10 114214605 114214897 -31374391 - L1MD3 LINE L1 -361 7634 7332 791 183 0 0 chr10 114215245 114215376 -31373912 - FLAM_A SINE Alu -1 132 2 582 354 17 4 chr10 114215438 114215675 -31373613 + Charlie8 DNA MER1_type 33 272 -2145 400 378 40 10 chr10 114215765 114216067 -31373221 + L3 LINE CR1 1260 1570 -7 2666 50 0 0 chr10 114219220 114219520 -31369768 + AluY SINE Alu 1 300 -11 779 254 77 75 chr10 114219801 114220104 -31369184 + MLT1K LTR MaLR 141 447 -141 882 0 0 0 chr10 114220104 114220202 -31369086 + (GA)n Simple_repeat Simple_repeat 1 98 0 779 254 77 75 chr10 114220202 114220339 -31368949 + MLT1K LTR MaLR 447 582 -6 1336 259 32 15 chr10 114221755 114222160 -31367128 + LTR16C LTR ERVL 80 491 0 582 270 22 6 chr10 114222737 114222915 -31366373 + MIR SINE MIR 82 262 0 460 282 44 6 chr10 114224149 114224330 -31364958 + L1ME4a LINE L1 5797 5984 -137 379 139 47 35 chr10 114224339 114224425 -31364863 + L1ME4a LINE L1 6035 6121 0 434 310 15 30 chr10 114224466 114224666 -31364622 - MIR SINE MIR -46 216 20 594 256 105 11 chr10 114224939 114225130 -31364158 - MER3 DNA MER1_type 0 209 1 391 270 63 0 chr10 114225193 114225304 -31363984 + L2 LINE L2 3179 3296 -17 650 278 22 107 chr10 114225313 114225868 -31363420 + L2 LINE L2 2750 3261 -11 298 267 23 0 chr10 114225852 114225938 -31363350 - L2 LINE L2 -10 3303 3216 * 933 228 47 9 chr10 114226282 114226515 -31362773 - MIR SINE MIR -14 248 7 491 285 52 124 chr10 114226932 114227409 -31361879 - L2 LINE L2 -26 3246 2804 347 250 13 0 chr10 114227421 114227497 -31361791 - MER94 DNA DNA -2 132 56 207 258 50 88 chr10 114227514 114227673 -31361615 - L2 LINE L2 -504 2810 2658 208 148 0 37 chr10 114228175 114228229 -31361059 + (TCCC)n Simple_repeat Simple_repeat 1 52 0 2902 10 0 0 chr10 114229189 114229500 -31359788 - AluYb8 SINE Alu -7 311 1 662 259 44 51 chr10 114229938 114230212 -31359076 - MER102a DNA MER1_type -15 315 44 3692 135 28 22 chr10 114230567 114231407 -31357881 + L1PB4 LINE L1 5289 6150 -1 274 213 213 0 chr10 114231456 114231531 -31357757 - MIR SINE MIR -15 247 157 2261 97 58 25 chr10 114231558 114231918 -31357370 + THE1C LTR MaLR 1 372 -3 1602 153 35 11 chr10 114231918 114232179 -31357109 - AluJb SINE Alu -33 279 13 2417 109 0 0 chr10 114232199 114232510 -31356778 - AluY SINE Alu 0 311 1 299 225 45 45 chr10 114232511 114232600 -31356688 - MIR SINE MIR -108 154 66 1643 180 20 13 chr10 114232947 114233412 -31355876 - AluJb SINE Alu 0 469 3 36 23 0 0 chr10 114234163 114234206 -31355082 + AT_rich Low_complexity Low_complexity 1 43 0 232 207 0 35 chr10 114234478 114234536 -31354752 + L2 LINE L2 3210 3265 -7 4685 129 10 17 chr10 114234824 114235020 -31354268 - L1MA4 LINE L1 -4 6179 5983 2109 136 0 0 chr10 114235020 114235315 -31353973 - AluSx SINE Alu -16 296 2 4685 129 10 17 chr10 114235315 114236005 -31353283 - L1MA4 LINE L1 -200 5983 5258 2084 145 30 30 chr10 114236200 114236573 -31352715 + MER83C LTR ERV1 1 373 0 279 288 44 50 chr10 114236624 114236784 -31352504 - MIR SINE MIR -9 253 95 3085 153 31 53 chr10 114236962 114237607 -31351681 - MER4D LTR ERV1 0 878 277 793 144 0 0 chr10 114237746 114237864 -31351424 - FLAM_C SINE Alu -15 118 1 359 328 11 44 chr10 114238040 114238203 -31351085 - MIR SINE MIR -13 249 91 1549 175 6 46 chr10 114238203 114238528 -31350760 + AluJo SINE Alu 1 312 0 359 328 11 44 chr10 114238528 114238547 -31350741 - MIR SINE MIR -171 91 73 273 242 77 11 chr10 114239794 114239885 -31349403 - MIR SINE MIR 0 262 166 1802 136 4 0 chr10 114240188 114240498 -31348790 + AluSx SINE Alu 1 311 0 3608 140 63 5 chr10 114241312 114241946 -31347342 - L1MA8 LINE L1 -5 6286 5616 185 240 40 0 chr10 114242442 114242492 -31346796 + MIR SINE MIR 204 255 -7 22 0 0 0 chr10 114243044 114243066 -31346222 + AT_rich Low_complexity Low_complexity 1 22 0 374 301 171 20 chr10 114243739 114243938 -31345350 + MIR SINE MIR 34 262 0 195 114 0 0 chr10 114244293 114244328 -31344960 + (TG)n Simple_repeat Simple_repeat 2 36 0 318 50 0 0 chr10 114245396 114245436 -31343852 + (CA)n Simple_repeat Simple_repeat 2 41 0 2319 57 0 0 chr10 114245492 114245807 -31343481 + AluY SINE Alu 1 315 0 507 300 110 5 chr10 114246238 114246445 -31342843 + MIR SINE MIR 36 262 0 226 259 33 19 chr10 114247611 114247679 -31341609 + MER5A DNA MER1_type 31 109 -80 185 182 0 0 chr10 114247687 114247720 -31341568 - MER5B DNA MER1_type -144 34 2 227 258 177 0 chr10 114247896 114247958 -31341330 - MIR SINE MIR -170 92 20 27 0 0 0 chr10 114248909 114248936 -31340352 + AT_rich Low_complexity Low_complexity 1 27 0 1070 144 5 5 chr10 114248953 114249141 -31340147 - L1MB3 LINE L1 -22 6161 5974 452 287 110 0 chr10 114249182 114249318 -31339970 - MER5A DNA MER1_type -20 169 19 978 198 39 0 chr10 114249744 114249926 -31339362 + MER5A DNA MER1_type 1 189 0 508 195 65 24 chr10 114250804 114250927 -31338361 - L2 LINE L2 -4 3309 3182 632 233 122 90 chr10 114250989 114251462 -31337826 - MLT1H LTR MaLR -1 548 20 25 0 0 0 chr10 114251942 114251967 -31337321 + AT_rich Low_complexity Low_complexity 1 25 0 1281 147 4 43 chr10 114251967 114252199 -31337089 - AluJo SINE Alu -22 290 68 252 395 26 13 chr10 114252337 114252489 -31336799 + MER5A DNA MER1_type 7 160 -29 343 169 17 0 chr10 114252578 114252637 -31336651 + L2 LINE L2 3001 3060 -212 449 257 29 51 chr10 114252757 114252932 -31336356 - MIR3 SINE MIR -28 180 10 198 204 0 23 chr10 114253588 114253632 -31335656 + L2 LINE L2 3271 3313 0 290 325 98 25 chr10 114253724 114253887 -31335401 + MIR SINE MIR 31 205 -57 375 247 59 0 chr10 114254169 114254254 -31335034 + MIR SINE MIR 35 124 -84 491 214 143 0 chr10 114254465 114254577 -31334711 + MER5A DNA MER1_type 2 129 -60 983 176 33 52 chr10 114255400 114255610 -31333678 + MER3 DNA MER1_type 1 206 -3 1147 230 113 53 chr10 114256043 114256513 -31332775 - LTR33A LTR ERVL -1 522 25 192 40 0 0 chr10 114256516 114256541 -31332747 + (TG)n Simple_repeat Simple_repeat 2 26 0 213 258 40 89 chr10 114256803 114256927 -31332361 - L2 LINE L2 -187 3085 2968 1972 123 7 7 chr10 114256970 114257270 -31332018 - AluSx SINE Alu -12 300 1 216 184 0 0 chr10 114257720 114257769 -31331519 + (TCCA)n Simple_repeat Simple_repeat 4 52 0 256 220 77 44 chr10 114257934 114258025 -31331263 - L2 LINE L2 -40 3273 3180 423 257 78 36 chr10 114258247 114258392 -31330896 - MIR SINE MIR -63 145 3 408 322 50 6 chr10 114259750 114259930 -31329358 + MIR SINE MIR 47 234 -28 4058 96 46 11 chr10 114260172 114260779 -31328509 + L1MA2 LINE L1 5677 6304 0 1668 105 0 126 chr10 114261569 114261894 -31327394 - AluSg1 SINE Alu -25 284 1 763 279 75 4 chr10 114261960 114262186 -31327102 - MIR SINE MIR -12 250 9 432 265 38 15 chr10 114262206 114262338 -31326950 - MIR3 SINE MIR -61 147 13 243 0 0 0 chr10 114263010 114263037 -31326251 + (T)n Simple_repeat Simple_repeat 1 27 0 237 214 0 0 chr10 114263104 114263160 -31326128 + L2 LINE L2 3216 3271 -1 290 392 77 36 chr10 114264328 114264550 -31324738 + L2 LINE L2 3025 3255 -17 428 202 188 58 chr10 114264609 114264872 -31324416 + MLT1I LTR MaLR 81 383 -26 219 36 0 0 chr10 114265180 114265208 -31324080 + (TTG)n Simple_repeat Simple_repeat 2 29 0 233 283 139 56 chr10 114265649 114265829 -31323459 - L2 LINE L2 -20 3293 3099 2031 124 3 7 chr10 114266194 114266493 -31322795 + AluSx SINE Alu 1 298 -14 329 346 21 16 chr10 114267164 114267352 -31321936 + L2 LINE L2 2618 2806 -508 2171 147 76 0 chr10 114267363 114267759 -31321529 + L1MB3 LINE L1 5755 6180 -3 588 301 33 0 chr10 114268138 114268321 -31320967 + LTR33 LTR ERVL 1 189 -332 257 224 168 101 chr10 114268367 114268546 -31320742 - MLT1J LTR MaLR -238 273 83 353 88 35 0 chr10 114268564 114268621 -31320667 + CT-rich Low_complexity Low_complexity 2 60 0 43675 34 22 4 chr10 114268628 114274671 -31314617 - L1PA3 LINE L1 0 6155 2 952 94 18 18 chr10 114274671 114274841 -31314447 + (TTTC)n Simple_repeat Simple_repeat 1 170 0 803 106 0 0 chr10 114274867 114274971 -31314317 - AluSp/q SINE Alu -34 279 176 1217 85 6 0 chr10 114274997 114275173 -31314115 + (TTTC)n Simple_repeat Simple_repeat 3 179 0 321 26 0 0 chr10 114275175 114275213 -31314075 + (TTCC)n Simple_repeat Simple_repeat 3 40 0 1972 133 0 0 chr10 114275240 114275519 -31313769 - AluSq SINE Alu -34 279 1 670 302 45 16 chr10 114276250 114276492 -31312796 + MIR SINE MIR 13 261 -1 183 156 0 0 chr10 114276885 114276917 -31312371 + GA-rich Low_complexity Low_complexity 3 34 0 408 341 23 17 chr10 114277217 114277390 -31311898 + MIR SINE MIR 81 254 -8 448 126 0 15 chr10 114277494 114277583 -31311705 - L1MA8 LINE L1 -302 5989 5905 1654 153 23 10 chr10 114277584 114277885 -31311403 + L1MA8 LINE L1 5984 6288 -3 347 340 96 43 chr10 114278908 114279117 -31310171 + L2 LINE L2 3048 3267 -5 387 0 0 0 chr10 114279272 114279315 -31309973 + (TG)n Simple_repeat Simple_repeat 2 44 0 345 276 89 24 chr10 114279401 114279524 -31309764 - L2 LINE L2 -1 3271 3141 530 292 45 22 chr10 114279557 114279735 -31309553 - MIR SINE MIR -1 261 80 2004 115 0 4 chr10 114281021 114281348 -31307940 + AluSx SINE Alu 5 330 0 292 146 0 0 chr10 114281949 114281997 -31307291 - L2 LINE L2 0 3272 3225 1289 260 83 25 chr10 114281999 114282430 -31306858 + MLT1K LTR MaLR 132 587 -1 1373 279 82 8 chr10 114283430 114283904 -31305384 - LTR33 LTR ERVL -9 512 4 2524 122 84 5 chr10 114284019 114284413 -31304875 - MSTA LTR MaLR 0 428 4 2371 195 14 0 chr10 114284527 114284947 -31304341 - MSTB LTR MaLR 0 426 1 349 313 80 31 chr10 114287406 114287569 -31301719 + MIR SINE MIR 20 190 -72 891 193 21 73 chr10 114288056 114288289 -31300999 + MER58A DNA MER1_type 2 222 -2 283 318 128 0 chr10 114289570 114289718 -31299570 - MIR3 SINE MIR -8 200 34 350 310 65 27 chr10 114289963 114290147 -31299141 - MIR SINE MIR -23 239 49 1873 155 10 3 chr10 114290272 114290562 -31298726 - AluJb SINE Alu -20 292 1 283 354 8 8 chr10 114291404 114291534 -31297754 + MIR3 SINE MIR 35 164 -44 1166 150 0 0 chr10 114291535 114291708 -31297580 - FRAM SINE Alu -4 172 1 830 296 4 16 chr10 114292871 114293114 -31296174 - MIR SINE MIR -2 260 21 508 202 178 0 chr10 114294247 114294376 -31294912 - MER5A DNA MER1_type -29 160 9 314 342 25 40 chr10 114294511 114294710 -31294578 - MER117 DNA MER1_type -1 196 1 614 266 35 0 chr10 114294932 114295101 -31294187 - MER5B DNA MER1_type 0 178 4 839 283 49 29 chr10 114296896 114297203 -31292085 - MER102a DNA MER1_type -15 315 3 213 141 16 31 chr10 114298919 114298983 -31290305 + (ATG)n Simple_repeat Simple_repeat 2 64 0 2310 79 0 0 chr10 114299048 114299354 -31289934 + AluY SINE Alu 5 310 0 263 279 106 0 chr10 114299359 114299463 -31289825 - MIR SINE MIR -56 206 92 296 305 184 5 chr10 114299604 114299794 -31289494 + MIR SINE MIR 17 240 -22 531 320 132 0 chr10 114299968 114300196 -31289092 - MIR SINE MIR 0 262 5 300 248 18 37 chr10 114300245 114300354 -31288934 - MIR SINE MIR -78 130 24 211 240 20 0 chr10 114301354 114301404 -31287884 + L2 LINE L2 3261 3311 -2 1293 227 51 9 chr10 114302109 114302314 -31286974 - L1MD3 LINE L1 -10 7985 7759 3966 143 11 8 chr10 114302314 114302966 -31286322 - L1PA16 LINE L1 0 6166 5513 1293 227 51 9 chr10 114302966 114303091 -31286197 - L1MD3 LINE L1 -236 7759 7641 651 180 0 8 chr10 114303089 114303211 -31286077 + L1MD3 LINE L1 7522 7642 -353 * 437 244 40 40 chr10 114303759 114303935 -31285353 - L2 LINE L2 -5 3308 3133 1045 224 27 27 chr10 114304646 114304857 -31284431 - L1M4 LINE L1 -1302 4844 4631 1860 130 6 67 chr10 114304857 114305172 -31284116 - AluSx SINE Alu -16 296 1 1045 224 27 27 chr10 114305172 114305254 -31284034 - L1M4 LINE L1 -1514 4632 4551 1511 119 53 32 chr10 114305425 114305710 -31283578 - L1MB5 LINE L1 0 6174 5884 1727 215 71 7 chr10 114305719 114306156 -31283132 - L1M4 LINE L1 -1518 4628 4164 11208 203 62 32 chr10 114306177 114307039 -31282249 - L1MA8 LINE L1 -2 6787 5952 1667 225 31 6 chr10 114307039 114307395 -31281893 + MLT1A1 LTR MaLR 1 365 0 11208 203 62 32 chr10 114307395 114312896 -31276392 - L1MA8 LINE L1 -837 5952 186 1604 107 5 0 chr10 114312896 114313102 -31276186 + AluSx SINE Alu 1 207 -105 348 89 0 0 chr10 114313102 114313147 -31276141 + AluSx SINE Alu 250 294 -8 244 358 13 13 chr10 114313179 114313330 -31275958 - L1M4 LINE L1 -6382 160 10 * 327 209 0 104 chr10 114313329 114313444 -31275844 - L1ME3A LINE L1 0 6170 6068 22 0 0 0 chr10 114313449 114313471 -31275817 + AT_rich Low_complexity Low_complexity 1 22 0 180 304 0 0 chr10 114314058 114314104 -31275184 + MIR SINE MIR 104 149 -113 209 133 67 0 chr10 114315980 114316025 -31273263 + GA-rich Low_complexity Low_complexity 2 49 0 1891 172 24 50 chr10 114316034 114316417 -31272871 + MLT1B LTR MaLR 18 390 0 221 260 0 20 chr10 114317412 114317462 -31271826 + L2 LINE L2 3223 3271 -1 1786 162 45 0 chr10 114317868 114318158 -31271130 - AluJo SINE Alu -9 303 1 222 158 0 0 chr10 114318210 114318248 -31271040 - L2 LINE L2 -13 3300 3263 380 262 81 58 chr10 114319609 114319732 -31269556 + MER5B DNA MER1_type 2 132 -46 393 58 0 0 chr10 114319732 114319784 -31269504 + (TG)n Simple_repeat Simple_repeat 2 53 0 380 262 81 58 chr10 114319784 114319832 -31269456 + MER5B DNA MER1_type 132 177 -1 2111 122 30 0 chr10 114320094 114320397 -31268891 + AluSx SINE Alu 1 312 0 207 184 0 0 chr10 114320465 114320503 -31268785 + (TTCA)n Simple_repeat Simple_repeat 3 40 0 373 338 155 12 chr10 114321684 114322187 -31267101 - L2 LINE L2 -506 2808 2234 320 336 114 0 chr10 114322205 114322345 -31266943 - MIR SINE MIR -71 191 36 293 247 62 21 chr10 114322744 114322841 -31266447 + MER117 DNA MER1_type 97 197 0 2310 111 33 28 chr10 114323544 114323906 -31265382 + THE1B LTR MaLR 1 364 0 686 88 13 3 chr10 114325162 114325400 -31263888 + AluY SINE Alu 1 307 -4 382 244 16 31 chr10 114325496 114325623 -31263665 - L1MB8 LINE L1 0 6178 6054 333 364 0 0 chr10 114325805 114325970 -31263318 - MIR SINE MIR -15 247 83 295 107 18 36 chr10 114327106 114327162 -31262126 - MLT1K LTR MaLR -18 570 516 216 0 0 0 chr10 114327793 114327817 -31261471 + (CG)n Simple_repeat Simple_repeat 2 25 0 * 336 48 0 0 chr10 114327816 114327858 -31261430 + (CA)n Simple_repeat Simple_repeat 1 42 0 372 204 97 10 chr10 114327878 114327981 -31261307 - L2 LINE L2 -4 3309 3198 1689 169 41 78 chr10 114328174 114328591 -31260697 + Charlie1b DNA MER1_type 77 477 -2284 2009 130 18 0 chr10 114328591 114328875 -31260413 + AluSx SINE Alu 1 289 -23 1689 169 41 78 chr10 114328875 114328920 -31260368 + Charlie1b DNA MER1_type 477 522 -1 417 263 152 58 chr10 114328966 114329327 -31259961 - LTR67 LTR ERVL -55 502 108 203 328 0 31 chr10 114329693 114329757 -31259531 + MIR SINE MIR 3 64 -198 262 246 16 0 chr10 114330688 114330749 -31258539 - MER103 DNA DNA -9 157 96 2055 136 11 0 chr10 114330754 114331041 -31258247 + AluSx SINE Alu 1 290 -22 21 36 0 0 chr10 114331041 114331069 -31258219 + AT_rich Low_complexity Low_complexity 1 28 0 2222 223 44 13 chr10 114331138 114331663 -31257625 - L1ME1 LINE L1 -4 6162 5622 393 248 138 38 chr10 114332772 114332995 -31256293 + MIR SINE MIR 9 250 -12 268 346 24 8 chr10 114333158 114333285 -31256003 - L3 LINE CR1 -2 1575 1447 430 267 149 0 chr10 114333312 114333473 -31255815 + MIR SINE MIR 65 249 -13 211 245 0 20 chr10 114333885 114333934 -31255354 - MER5A DNA MER1_type -92 97 50 484 307 26 21 chr10 114333943 114334132 -31255156 + MIR3 SINE MIR 16 205 -3 207 100 0 0 chr10 114334499 114334529 -31254759 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 556 326 92 24 chr10 114334569 114335200 -31254088 - L2 LINE L2 -75 3238 2564 25 65 0 0 chr10 114335623 114335669 -31253619 + AT_rich Low_complexity Low_complexity 1 46 0 1889 157 0 10 chr10 114335758 114336051 -31253237 + AluJo SINE Alu 1 290 -22 247 148 209 35 chr10 114336114 114336229 -31253059 - L1 LINE L1 -2542 3604 3470 468 221 0 11 chr10 114336783 114336878 -31252410 - MER117 DNA MER1_type -103 94 1 2053 137 0 10 chr10 114337330 114337630 -31251658 + AluSq SINE Alu 1 297 -16 275 314 0 0 chr10 114337960 114338030 -31251258 - MIR SINE MIR -61 147 78 202 267 80 13 chr10 114338523 114338598 -31250690 + MIR SINE MIR 59 138 -70 2295 105 0 0 chr10 114339003 114339298 -31249990 - AluSg SINE Alu -15 295 1 532 318 35 5 chr10 114341044 114341242 -31248046 + MIR SINE MIR 31 234 -28 670 276 105 18 chr10 114341289 114341517 -31247771 + MIR SINE MIR 12 259 -3 288 211 14 14 chr10 114341879 114341950 -31247338 - MER94 DNA DNA -56 78 8 553 284 30 52 chr10 114342670 114342902 -31246386 - MIR SINE MIR -21 241 15 426 261 9 9 chr10 114342935 114343050 -31246238 - MIR SINE MIR -129 133 19 429 298 44 26 chr10 114344219 114344447 -31244841 - L2 LINE L2 -2 3311 3080 595 293 93 31 chr10 114345307 114345324 -31243964 - L3 LINE CR1 -270 1307 1292 1027 234 126 83 chr10 114345324 114345855 -31243433 - MLT1H1 LTR MaLR -1 554 1 595 293 93 31 chr10 114345855 114346192 -31243096 - L3 LINE CR1 -285 1292 931 284 267 67 9 chr10 114346219 114346324 -31242964 - L1ME4a LINE L1 -33 6088 5978 782 311 160 27 chr10 114346410 114347043 -31242245 - L3 LINE CR1 -591 986 270 745 269 99 78 chr10 114347508 114347943 -31241345 - MLT1K LTR MaLR 0 588 145 363 245 102 66 chr10 114348012 114348208 -31241080 - LTR33A LTR ERVL -276 247 45 1917 139 68 6 chr10 114348412 114348735 -31240553 + MER61A LTR ERV1 1 343 0 2409 145 38 44 chr10 114348735 114349415 -31239873 + HUERS-P3b LTR ERV1 1 783 -4434 * 25533 89 32 17 chr10 114349404 114353156 -31236132 + HUERS-P3b LTR ERV1 1320 5217 0 1934 132 62 6 chr10 114353156 114353481 -31235807 + MER61A LTR ERV1 1 343 0 464 282 86 68 chr10 114354084 114354321 -31234967 + Charlie8 DNA MER1_type 2 246 -95 2214 101 24 0 chr10 114354321 114354609 -31234679 + AluSg SINE Alu 1 295 -15 464 282 86 68 chr10 114354609 114354651 -31234637 + Charlie8 DNA MER1_type 246 286 -55 242 171 0 0 chr10 114355228 114355269 -31234019 - MLT2B1 LTR ERVL -1 519 479 562 80 0 30 chr10 114355275 114355375 -31233913 + (TCTA)n Simple_repeat Simple_repeat 1 97 0 1408 183 51 39 chr10 114355383 114355716 -31233572 - MLT2B1 LTR ERVL -182 338 2 381 244 35 17 chr10 114356784 114356899 -31232389 - MER103 DNA DNA -35 131 15 526 217 155 26 chr10 114357507 114357945 -31231343 - MLT1F LTR MaLR -4 538 1 458 280 21 14 chr10 114358006 114358149 -31231139 - MIR SINE MIR -70 192 49 374 290 127 40 chr10 114358600 114358978 -31230310 + LTR16A1 LTR ERVL 68 457 0 1496 203 25 0 chr10 114359398 114359718 -31229570 + AluJo SINE Alu 15 341 0 269 273 0 15 chr10 114359749 114359815 -31229473 + MIR SINE MIR 28 92 -116 423 0 0 0 chr10 114360717 114360764 -31228524 + (TG)n Simple_repeat Simple_repeat 2 48 0 480 324 9 26 chr10 114361112 114361359 -31227929 + MIR SINE MIR 23 262 0 348 259 26 0 chr10 114361844 114361960 -31227328 - MIR SINE MIR -13 249 131 6169 198 81 43 chr10 114362226 114363766 -31225522 + L1MD1 LINE L1 27 1623 -4917 483 186 99 42 chr10 114363750 114363927 -31225361 + L1MA9 LINE L1 6156 6311 -1 * 660 203 59 100 chr10 114363994 114364076 -31225212 + L1MD1 LINE L1 1647 1731 -4809 1740 164 36 30 chr10 114364076 114364380 -31224908 - AluJo SINE Alu -6 306 1 660 203 59 100 chr10 114364380 114364587 -31224701 + L1MD1 LINE L1 1731 1924 -4616 * 789 161 50 0 chr10 114364586 114364866 -31224422 + L1MA7 LINE L1 5881 6280 -11 9819 215 40 29 chr10 114364890 114366888 -31222400 + L1MD1 LINE L1 1913 3887 -2749 1980 81 0 16 chr10 114366888 114367158 -31222130 + AluSc SINE Alu 38 303 0 9819 215 40 29 chr10 114367158 114368725 -31220563 + L1MD1 LINE L1 3887 5538 -1098 2161 94 3 24 chr10 114368725 114369040 -31220248 - AluY SINE Alu 0 309 1 9819 215 40 29 chr10 114369040 114370098 -31219190 + L1MD1 LINE L1 5538 6583 -53 331 54 71 0 chr10 114370098 114370154 -31219134 + T-rich Low_complexity Low_complexity 5 64 0 1749 177 6 22 chr10 114370165 114370481 -31218807 - AluJo SINE Alu -1 311 1 361 119 0 0 chr10 114370487 114370546 -31218742 + L1MD2 LINE L1 6297 6355 -4 448 260 0 0 chr10 114370691 114370791 -31218497 + MER94 DNA DNA 1 100 -34 641 268 108 13 chr10 114371870 114372101 -31217187 - MIR SINE MIR -2 260 8 352 319 92 25 chr10 114373118 114373281 -31216007 + LTR16B LTR ERVL 54 227 -237 268 207 174 74 chr10 114373957 114374078 -31215210 + MIR SINE MIR 44 176 -86 763 315 34 0 chr10 114374097 114374335 -31214953 - MIR SINE MIR -4 258 13 691 234 241 80 chr10 114374908 114375309 -31213979 + LTR67 LTR ERVL 2 494 -63 2248 125 0 3 chr10 114375309 114375622 -31213666 - AluSx SINE Alu 0 312 1 691 234 241 80 chr10 114375622 114375698 -31213590 + LTR67 LTR ERVL 494 556 -1 364 227 0 0 chr10 114375845 114375920 -31213368 - L2 LINE L2 -17 3255 3181 2215 101 0 55 chr10 114376398 114376726 -31212562 + AluSx SINE Alu 1 310 -2 405 70 0 0 chr10 114376827 114376884 -31212404 + (TG)n Simple_repeat Simple_repeat 1 57 0 215 139 28 0 chr10 114377282 114377318 -31211970 + (ATG)n Simple_repeat Simple_repeat 2 38 0 371 299 35 80 chr10 114377443 114377619 -31211669 - L2 LINE L2 -466 2848 2691 1239 188 71 26 chr10 114377619 114377927 -31211361 + MER33 DNA MER1_type 1 322 -2 371 299 35 80 chr10 114377927 114378064 -31211224 - L2 LINE L2 -623 2691 2549 311 325 32 6 chr10 114379654 114379811 -31209477 + CT-rich Low_complexity Low_complexity 2 162 0 191 36 36 0 chr10 114382663 114382691 -31206597 + (CCCCCA)n Simple_repeat Simple_repeat 2 30 0 324 0 0 0 chr10 114384003 114384039 -31205249 + (TG)n Simple_repeat Simple_repeat 2 37 0 185 208 21 21 chr10 114387246 114387294 -31201994 + L2 LINE L2 3265 3312 -1 251 316 10 0 chr10 114388476 114388574 -31200714 - MIR3 SINE MIR 0 208 110 807 214 40 44 chr10 114389495 114389743 -31199545 + MIR SINE MIR 10 256 -6 311 317 30 0 chr10 114389775 114389876 -31199412 - MIR SINE MIR -61 147 44 270 294 88 0 chr10 114391596 114391698 -31197590 + MIR SINE MIR 110 220 -42 1814 94 21 70 chr10 114391728 114392015 -31197273 + AluSx SINE Alu 24 296 -16 872 263 58 39 chr10 114392078 114392337 -31196951 + LTR16C LTR ERVL 58 321 -170 315 0 0 0 chr10 114392353 114392388 -31196900 + (TG)n Simple_repeat Simple_repeat 2 36 0 205 184 0 0 chr10 114392500 114392538 -31196750 + (TTCA)n Simple_repeat Simple_repeat 3 40 0 239 333 0 0 chr10 114392544 114392613 -31196675 + MIR SINE MIR 84 152 -56 253 289 168 29 chr10 114393635 114393808 -31195480 - HAL1 LINE L1 -629 1878 1682 445 226 28 0 chr10 114393809 114393915 -31195373 - MER94 DNA DNA -23 111 3 22 0 0 0 chr10 114393937 114393959 -31195329 + AT_rich Low_complexity Low_complexity 1 22 0 6423 87 11 3 chr10 114393959 114394849 -31194439 - L1MA2 LINE L1 -4 6300 5404 262 290 60 0 chr10 114394876 114394976 -31194312 - HAL1 LINE L1 -858 1649 1544 2133 120 17 0 chr10 114395264 114395555 -31193733 + AluSx SINE Alu 1 296 -16 1195 159 88 4 chr10 114395562 114395813 -31193475 - L1PA14 LINE L1 -2 6159 5888 21 36 0 0 chr10 114395813 114395841 -31193447 + AT_rich Low_complexity Low_complexity 1 28 0 2663 143 22 12 chr10 114395858 114396270 -31193018 + MSTA LTR MaLR 1 416 -12 985 145 7 0 chr10 114396373 114396525 -31192763 + AluSg/x SINE Alu 155 307 -3 5583 188 55 6 chr10 114396530 114398631 -31190657 + L1MB3 LINE L1 3975 6183 0 275 231 51 68 chr10 114398690 114398807 -31190481 - MIR3 SINE MIR -30 178 64 499 301 22 35 chr10 114399238 114399467 -31189821 - MIR SINE MIR -31 231 6 186 133 0 0 chr10 114399672 114399702 -31189586 + (CA)n Simple_repeat Simple_repeat 1 30 0 226 0 59 0 chr10 114400823 114400857 -31188431 + (TC)n Simple_repeat Simple_repeat 1 36 0 319 175 0 0 chr10 114400908 114400965 -31188323 + MIR SINE MIR 59 115 -147 1408 157 0 5 chr10 114401026 114401243 -31188045 + AluJo SINE Alu 82 297 -15 313 229 73 28 chr10 114403332 114403441 -31185847 + MIR3 SINE MIR 81 194 -14 279 302 0 0 chr10 114404349 114404412 -31184876 + L3 LINE CR1 1496 1558 -19 185 286 33 55 chr10 114404822 114404913 -31184375 + MIR3 SINE MIR 68 156 -52 563 338 8 8 chr10 114405472 114405712 -31183576 + MIR SINE MIR 23 262 0 473 319 71 6 chr10 114405890 114406072 -31183216 + MIR SINE MIR 61 254 -8 405 39 0 0 chr10 114406275 114406326 -31182962 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 264 145 66 26 chr10 114406918 114406994 -31182294 + L1MB4 LINE L1 6102 6180 0 384 288 105 20 chr10 114408053 114408249 -31181039 - MIR SINE MIR -27 235 19 186 359 102 6 chr10 114408373 114408540 -31180748 + MIR3 SINE MIR 5 187 -21 246 70 0 53 chr10 114408921 114408978 -31180310 + (CAAAAA)n Simple_repeat Simple_repeat 5 58 0 213 39 0 0 chr10 114409053 114409079 -31180209 + (CAT)n Simple_repeat Simple_repeat 2 27 0 446 139 5 14 chr10 114409153 114409370 -31179918 + AluSq SINE Alu 1 294 -19 821 287 44 41 chr10 114410547 114410909 -31178379 - MLT1H LTR MaLR -182 367 5 1763 152 32 48 chr10 114411117 114411433 -31177855 - AluJb SINE Alu -1 311 1 424 273 35 17 chr10 114412996 114413168 -31176120 - MIR SINE MIR -77 185 11 213 204 130 0 chr10 114413147 114413201 -31176087 - L2 LINE L2 0 3313 3253 * 775 281 74 13 chr10 114413407 114413784 -31175504 - L2 LINE L2 -78 3235 2836 1022 213 13 29 chr10 114414726 114414965 -31174323 - MIR SINE MIR 0 262 28 240 122 0 0 chr10 114415335 114415376 -31173912 + (TGAA)n Simple_repeat Simple_repeat 1 41 0 581 282 53 13 chr10 114416330 114416557 -31172731 - L3 LINE CR1 -197 1380 1145 183 237 247 21 chr10 114416736 114416833 -31172455 - L2 LINE L2 0 3272 3154 218 253 40 0 chr10 114417056 114417131 -31172157 - MIR SINE MIR -1 261 184 386 229 121 36 chr10 114419392 114419558 -31169730 + MER5A DNA MER1_type 2 181 -8 366 43 0 0 chr10 114419919 114419965 -31169323 - MADE1 DNA Mariner 0 80 35 1321 174 14 5 chr10 114420463 114420681 -31168607 + AluJo SINE Alu 87 306 -6 450 248 85 7 chr10 114421895 114422036 -31167252 + MIR3 SINE MIR 42 193 -15 410 272 111 64 chr10 114422648 114422946 -31166342 - L2 LINE L2 -45 3227 2916 269 292 85 88 chr10 114422960 114423351 -31165937 - L2 LINE L2 -103 3169 2781 246 254 25 25 chr10 114423716 114423810 -31165478 + GA-rich Low_complexity Low_complexity 3 161 0 397 129 0 0 chr10 114424275 114424337 -31164951 - MER53 DNA DNA 0 189 128 566 206 194 26 chr10 114424454 114424683 -31164605 - MIR SINE MIR -1 261 4 831 179 0 0 chr10 114425254 114425586 -31163702 + (TGGA)n Simple_repeat Simple_repeat 1 332 0 407 271 199 0 chr10 114426531 114426682 -31162606 + MER20B DNA MER1_type 4 184 -599 1938 176 0 0 chr10 114427297 114427635 -31161653 + AluSx SINE Alu 1 338 0 363 310 0 21 chr10 114427672 114427817 -31161471 - MIR SINE MIR -55 207 66 200 282 71 12 chr10 114427882 114427967 -31161321 + L2 LINE L2 3167 3256 -16 312 306 113 0 chr10 114428120 114428280 -31161008 - MIR SINE MIR -25 237 60 193 300 92 42 chr10 114428479 114428599 -31160689 + L2 LINE L2 3186 3311 -2 312 300 20 0 chr10 114429043 114429143 -31160145 + (TATATG)n Simple_repeat Simple_repeat 3 104 0 2442 75 0 3 chr10 114429364 114429670 -31159618 + AluSc SINE Alu 3 307 -2 23 0 0 0 chr10 114430620 114430643 -31158645 + AT_rich Low_complexity Low_complexity 1 23 0 220 350 117 12 chr10 114430918 114431081 -31158207 - L2 LINE L2 -224 3048 2869 680 162 0 9 chr10 114431396 114431507 -31157781 + FLAM_C SINE Alu 5 114 -29 660 301 123 22 chr10 114481511 114481917 -31107371 + L2 LINE L2 2867 3313 0 187 333 33 11 chr10 114481925 114482015 -31107273 + MIR SINE MIR 169 260 -2 698 277 67 0 chr10 114483299 114483494 -31105794 + MER63A DNA MER1_type 3 210 0 1398 192 78 36 chr10 114483597 114483957 -31105331 + THE1C LTR MaLR 1 375 0 446 305 37 6 chr10 114485509 114485673 -31103615 + MIR SINE MIR 47 215 -47 852 261 62 48 chr10 114486799 114487071 -31102217 + AluJo SINE Alu 2 277 -35 390 366 44 4 chr10 114487215 114487442 -31101846 + L3 LINE CR1 1218 1453 -124 238 258 0 0 chr10 114487576 114487638 -31101650 - L2 LINE L2 -652 2662 2601 270 257 128 0 chr10 114487744 114487853 -31101435 + MIR3 SINE MIR 76 198 -10 405 0 0 0 chr10 114488074 114488119 -31101169 + (TA)n Simple_repeat Simple_repeat 1 45 0 706 138 0 9 chr10 114488191 114488300 -31100988 - AluSg/x SINE Alu -19 293 186 21 36 0 0 chr10 114488511 114488539 -31100749 + AT_rich Low_complexity Low_complexity 1 28 0 389 366 44 4 chr10 114488613 114488840 -31100448 + L3 LINE CR1 1218 1453 -124 238 258 0 0 chr10 114488974 114489036 -31100252 - L2 LINE L2 -652 2662 2601 405 0 0 0 chr10 114489471 114489516 -31099772 + (TA)n Simple_repeat Simple_repeat 1 45 0 2165 112 3 7 chr10 114489588 114489882 -31099406 - AluSx SINE Alu -19 293 1 256 291 28 65 chr10 114490648 114490781 -31098507 + MER5A DNA MER1_type 8 143 -46 273 333 21 0 chr10 114490811 114490904 -31098384 - L3 LINE CR1 -88 1489 1395 249 265 60 0 chr10 114491002 114491085 -31098203 - MIR3 SINE MIR -38 170 83 377 306 15 56 chr10 114492568 114492764 -31096524 - MER5A DNA MER1_type -1 188 1 214 363 55 7 chr10 114493852 114493998 -31095290 + L2 LINE L2 3161 3313 0 329 199 73 134 chr10 114494074 114494320 -31094968 - L1ME4a LINE L1 0 6121 5891 263 230 11 0 chr10 114494334 114494421 -31094867 + (TA)n Simple_repeat Simple_repeat 2 89 0 2222 139 0 29 chr10 114494461 114494807 -31094481 + MER1B DNA MER1_type 2 337 0 497 16 0 16 chr10 114494825 114494888 -31094400 + (TCTA)n Simple_repeat Simple_repeat 3 64 0 354 196 203 63 chr10 114494933 114495091 -31094197 - L1ME4a LINE L1 -347 5774 5595 333 350 46 9 chr10 114495532 114495749 -31093539 + MIR SINE MIR 24 248 -14 378 0 0 0 chr10 114495997 114496039 -31093249 + (CA)n Simple_repeat Simple_repeat 2 43 0 2186 124 0 0 chr10 114496396 114496694 -31092594 - AluSx SINE Alu -13 299 2 797 193 39 24 chr10 114497188 114497395 -31091893 - MIR SINE MIR -5 257 48 254 188 21 0 chr10 114497500 114497548 -31091740 - L2 LINE L2 -20 3252 3204 381 229 196 5 chr10 114498191 114498394 -31090894 + MIR SINE MIR 13 251 -11 2508 117 16 43 chr10 114498451 114498835 -31090453 + L1MA7 LINE L1 5852 6224 -67 2583 54 0 0 chr10 114498835 114499132 -31090156 + AluY SINE Alu 6 302 -9 2508 117 16 43 chr10 114499132 114499193 -31090095 + L1MA7 LINE L1 6224 6285 -6 2941 196 3 30 chr10 114499257 114499860 -31089428 + L1MA10 LINE L1 5727 6313 -21 527 293 29 11 chr10 114500611 114500785 -31088503 + MIR SINE MIR 16 192 -70 290 176 88 0 chr10 114501184 114501252 -31088036 + MIR SINE MIR 124 197 -65 186 338 88 0 chr10 114501832 114501900 -31087388 + L2 LINE L2 3237 3310 -3 237 254 35 79 chr10 114502146 114502260 -31087028 + MIR SINE MIR 104 212 -50 1834 176 120 28 chr10 114503058 114503524 -31085764 + L1MDa LINE L1 849 1357 -5183 2318 268 84 60 chr10 114505662 114506861 -31082427 - L2 LINE L2 0 3313 2086 2222 292 105 51 chr10 114506867 114507734 -31081554 + ERVL LTR ERVL 3980 4948 -816 1970 145 0 0 chr10 114507734 114508052 -31081236 - AluSq SINE Alu 0 318 1 2222 292 105 51 chr10 114508052 114508534 -31080754 + ERVL LTR ERVL 4948 5403 -361 2937 157 23 0 chr10 114508632 114509109 -31080179 + LTR42 LTR ERVL 8 495 0 1806 151 0 66 chr10 114509356 114509675 -31079613 + AluJb SINE Alu 1 298 -14 2783 90 0 0 chr10 114510227 114510604 -31078684 + L1PA8 LINE L1 5796 6172 0 453 285 17 41 chr10 114510624 114510796 -31078492 - L2 LINE L2 -1236 2078 1911 181 352 47 81 chr10 114511015 114511313 -31077975 + L2 LINE L2 2917 3204 -68 6401 140 23 17 chr10 114511760 114512799 -31076489 + Tigger1 DNA MER2_type 7 1051 -1367 6074 136 38 3 chr10 114512899 114513872 -31075416 + Tigger1 DNA MER2_type 1407 2413 -5 349 300 31 0 chr10 114514008 114514138 -31075150 - MIR SINE MIR -8 254 121 184 349 108 16 chr10 114514448 114514577 -31074711 + L3b LINE CR1 1437 1577 -6 373 263 134 6 chr10 114514850 114515029 -31074259 + MIR SINE MIR 37 238 -24 233 280 0 0 chr10 114515600 114515650 -31073638 + L2 LINE L2 3225 3274 -39 192 356 59 17 chr10 114515773 114515891 -31073397 - L2 LINE L2 -23 3249 3127 1787 208 48 68 chr10 114516043 114516558 -31072730 - MLT1D LTR MaLR 0 505 1 181 390 0 9 chr10 114516686 114516791 -31072497 - L2 LINE L2 -658 2656 2553 265 321 114 8 chr10 114518310 114518441 -31070847 - L2 LINE L2 -5 3267 3123 572 215 99 0 chr10 114518980 114519101 -31070187 + MLT1G1 LTR MaLR 38 170 -425 243 295 19 9 chr10 114519204 114519309 -31069979 + MLT1K LTR MaLR 441 546 -42 181 292 153 0 chr10 114519677 114519749 -31069539 + L2 LINE L2 3229 3311 -2 319 246 123 15 chr10 114519937 114520067 -31069221 - MIR SINE MIR -56 206 63 370 348 30 12 chr10 114520930 114521094 -31068194 + MER5A DNA MER1_type 10 176 -13 424 81 27 14 chr10 114521852 114521926 -31067362 + (GGAA)n Simple_repeat Simple_repeat 2 76 0 242 281 44 35 chr10 114522380 114522494 -31066794 + MIR SINE MIR 21 135 -127 767 220 3 19 chr10 114522531 114522897 -31066391 + GA-rich Low_complexity Low_complexity 1 359 0 376 272 114 19 chr10 114524087 114524245 -31065043 - L2 LINE L2 -2 3270 3098 816 237 71 5 chr10 114524730 114524941 -31064347 + MIR SINE MIR 6 230 -32 22 0 0 0 chr10 114524959 114524981 -31064307 + AT_rich Low_complexity Low_complexity 1 22 0 413 197 84 49 chr10 114525111 114525253 -31064035 - MIR SINE MIR -6 256 110 417 200 131 14 chr10 114525653 114525798 -31063490 - MER117 DNA MER1_type -34 163 2 454 248 163 0 chr10 114526274 114526427 -31062861 + MER5A DNA MER1_type 9 186 -3 1690 148 67 57 chr10 114526590 114526961 -31062327 - THE1C LTR MaLR 0 375 1 713 162 168 36 chr10 114527420 114527587 -31061701 - MER5A DNA MER1_type 0 189 1 561 266 11 43 chr10 114527614 114527757 -31061531 + MER5B DNA MER1_type 1 138 -40 1715 156 81 39 chr10 114527757 114528117 -31061171 - THE1C LTR MaLR 0 375 1 561 266 11 43 chr10 114528117 114528157 -31061131 + MER5B DNA MER1_type 138 178 0 721 272 67 0 chr10 114528220 114528415 -31060873 - MER63A DNA MER1_type 0 210 3 249 266 73 42 chr10 114530470 114530662 -31058626 + L2 LINE L2 2837 3034 -238 2424 171 33 18 chr10 114531279 114531736 -31057552 - MLT1C LTR MaLR 0 467 4 225 0 0 0 chr10 114533576 114533601 -31055687 + (A)n Simple_repeat Simple_repeat 1 25 0 222 62 0 0 chr10 114535377 114535409 -31053879 + (TGAA)n Simple_repeat Simple_repeat 2 33 0 252 295 166 7 chr10 114536263 114536402 -31052886 - MER5A DNA MER1_type -3 186 26 206 286 95 12 chr10 114536445 114536529 -31052759 + MIR SINE MIR 20 110 -152 205 194 0 0 chr10 114536560 114536596 -31052692 + L2 LINE L2 3216 3251 -21 1840 185 0 29 chr10 114537882 114538228 -31051060 + MER1B DNA MER1_type 2 337 0 473 0 0 17 chr10 114538246 114538304 -31050984 + (TCTA)n Simple_repeat Simple_repeat 4 60 0 299 189 11 95 chr10 114538417 114538512 -31050776 - L1ME LINE L1 -440 5681 5595 687 316 162 24 chr10 114539312 114539900 -31049388 + L3 LINE CR1 228 896 -681 430 260 68 31 chr10 114540085 114540277 -31049011 + MIR SINE MIR 55 253 -9 494 272 133 0 chr10 114540404 114540599 -31048689 - MIR SINE MIR -34 228 8 1983 134 66 17 chr10 114540826 114541176 -31048112 - THE1C LTR MaLR 0 375 9 290 302 229 5 chr10 114542127 114542319 -31046969 + MIR SINE MIR 23 257 -5 188 246 164 70 chr10 114543322 114543493 -31045795 - MIR SINE MIR 0 262 76 1127 171 9 46 chr10 114543577 114543794 -31045494 - AluJo SINE Alu -13 299 91 312 283 145 19 chr10 114544997 114545156 -31044132 + MIR SINE MIR 34 212 -50 189 0 0 0 chr10 114545681 114545702 -31043586 + (T)n Simple_repeat Simple_repeat 1 21 0 7974 27 24 0 chr10 114547005 114548511 -31040777 - L1PA3 LINE L1 0 6155 4629 207 402 36 0 chr10 114550633 114550745 -31038543 + L2 LINE L2 2996 3111 -161 180 0 0 0 chr10 114551181 114551201 -31038087 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1435 199 0 32 chr10 114551204 114551485 -31037803 - AluJo SINE Alu -30 282 11 645 195 50 6 chr10 114551640 114551799 -31037489 - L1MDa LINE L1 -4860 1680 1515 384 294 48 115 chr10 114551922 114552358 -31036930 - L2 LINE L2 -31 3282 2876 225 250 130 46 chr10 114554019 114554127 -31035161 + MIR SINE MIR 81 197 -65 315 270 132 46 chr10 114554668 114554842 -31034446 + L2 LINE L2 2697 2885 -429 2149 159 133 10 chr10 114554992 114555407 -31033881 + MLT1C LTR MaLR 1 466 -1 507 262 115 5 chr10 114555704 114555895 -31033393 - MIR SINE MIR -41 221 10 731 254 69 22 chr10 114556276 114556508 -31032780 + MIR SINE MIR 9 251 -11 8179 29 0 0 chr10 114556563 114557905 -31031383 - L1PA3 LINE L1 -1 6154 4813 188 67 33 0 chr10 114558071 114558101 -31031187 + (CA)n Simple_repeat Simple_repeat 2 32 0 21 0 0 0 chr10 114558191 114558212 -31031076 + AT_rich Low_complexity Low_complexity 1 21 0 2411 78 0 0 chr10 114558224 114558520 -31030768 + AluY SINE Alu 1 296 -15 581 254 150 26 chr10 114558537 114558884 -31030404 + L1ME4a LINE L1 5574 5963 -158 266 250 0 0 chr10 114559617 114559681 -31029607 + (TAAA)n Simple_repeat Simple_repeat 2 65 0 225 179 30 15 chr10 114560261 114560328 -31028960 + (TA)n Simple_repeat Simple_repeat 1 68 0 1862 167 0 7 chr10 114560579 114560866 -31028422 + AluJo SINE Alu 1 285 -27 285 29 0 0 chr10 114560866 114560900 -31028388 + (CA)n Simple_repeat Simple_repeat 2 35 0 1713 242 50 37 chr10 114560915 114561530 -31027758 + L1MD2 LINE L1 4275 4897 -1249 2949 213 59 14 chr10 114561530 114562229 -31027059 + L1MD2 LINE L1 5628 6357 -2 301 189 54 27 chr10 114563172 114563246 -31026042 + LTR67 LTR ERVL 472 547 -10 2182 121 0 3 chr10 114563292 114563599 -31025689 - AluSg SINE Alu -4 306 1 331 299 69 52 chr10 114564006 114564180 -31025108 + MER5A DNA MER1_type 12 188 -1 323 333 187 0 chr10 114565841 114565964 -31023324 - MIR3 SINE MIR -21 187 42 338 299 23 62 chr10 114565976 114566018 -31023270 + MER5A DNA MER1_type 17 59 -130 1798 161 7 10 chr10 114566018 114566316 -31022972 - AluJb SINE Alu -15 297 1 338 299 23 62 chr10 114566316 114566450 -31022838 + MER5A DNA MER1_type 59 186 -3 654 298 15 15 chr10 114566911 114567109 -31022179 - MIR SINE MIR -54 208 11 2248 113 0 3 chr10 114567179 114567488 -31021800 - AluSx SINE Alu -4 308 1 185 304 0 18 chr10 114567808 114567864 -31021424 + L2 LINE L2 3242 3296 -17 233 292 28 42 chr10 114568518 114568590 -31020698 - L2 LINE L2 -52 3220 3150 224 322 33 11 chr10 114571108 114571198 -31018090 - MIR SINE MIR -2 260 169 924 283 123 22 chr10 114571206 114571612 -31017676 - L2 LINE L2 0 3313 2867 609 232 40 33 chr10 114571663 114571814 -31017474 + MLT1C LTR MaLR 5 156 -349 856 126 7 15 chr10 114571819 114571954 -31017334 + MLT1C LTR MaLR 332 465 -2 281 325 0 0 chr10 114571957 114572040 -31017248 - MIR SINE MIR -150 112 30 1156 202 87 0 chr10 114573040 114573293 -31015995 - ORSL DNA AcHobo 0 275 1 218 237 114 79 chr10 114573343 114573457 -31015831 - L3 LINE CR1 -3 1574 1457 213 39 0 0 chr10 114575543 114575569 -31013719 + (CA)n Simple_repeat Simple_repeat 2 27 0 465 320 41 88 chr10 114576012 114576353 -31012935 - L2 LINE L2 -20 3252 2928 1279 279 25 40 chr10 114576418 114576888 -31012400 + LTR16B LTR ERVL 2 464 0 207 336 47 16 chr10 114576955 114577083 -31012205 + L2 LINE L2 2717 2848 -466 197 271 153 34 chr10 114577403 114577521 -31011767 + L2 LINE L2 3181 3312 -1 305 254 77 62 chr10 114577575 114577705 -31011583 - MIR3 SINE MIR -50 158 27 266 305 42 11 chr10 114577717 114577812 -31011476 - MER5A DNA MER1_type -23 166 69 540 231 92 44 chr10 114578491 114578711 -31010577 - MIR SINE MIR -6 256 27 317 263 132 18 chr10 114578996 114579110 -31010178 - MIR SINE MIR -86 176 50 371 312 52 81 chr10 114579578 114579886 -31009402 + L1ME LINE L1 5500 5798 -323 1852 146 37 0 chr10 114580342 114580636 -31008652 - AluJb SINE Alu -7 305 1 237 228 35 0 chr10 114580744 114580801 -31008487 + L2 LINE L2 3169 3227 -86 361 259 84 123 chr10 114581060 114581369 -31007919 - L2 LINE L2 -52 3220 2924 216 97 0 0 chr10 114581867 114581898 -31007390 + (A)n Simple_repeat Simple_repeat 1 31 0 315 348 93 56 chr10 114582291 114582777 -31006511 - L2 LINE L2 -1 3271 2782 480 252 9 0 chr10 114583814 114583925 -31005363 - L1PB4 LINE L1 -2 6154 6043 471 246 31 31 chr10 114584266 114584396 -31004892 + MIR SINE MIR 63 192 -70 194 356 98 26 chr10 114584410 114584604 -31004684 + L2 LINE L2 3004 3211 -61 389 219 51 48 chr10 114584792 114584918 -31004370 - L1MC3 LINE L1 -1 6163 6039 183 161 0 0 chr10 114584928 114584959 -31004329 + L2 LINE L2 3242 3272 0 564 278 82 53 chr10 114585072 114585622 -31003666 + L1ME4a LINE L1 5555 6120 -1 231 313 0 36 chr10 114585991 114586074 -31003214 + L2 LINE L2 3187 3266 -6 1345 242 116 18 chr10 114586164 114586622 -31002666 + MLT1H LTR MaLR 13 515 -34 418 303 118 44 chr10 114586659 114586930 -31002358 + L2 LINE L2 2308 2598 -716 446 249 176 36 chr10 114586932 114587097 -31002191 + MIR SINE MIR 70 257 -5 217 359 87 49 chr10 114587201 114587569 -31001719 + L2 LINE L2 2891 3272 0 261 180 0 0 chr10 114588583 114588633 -31000655 + (CA)n Simple_repeat Simple_repeat 1 50 0 369 314 8 0 chr10 114589260 114589384 -30999904 - L1ME LINE L1 -464 5657 5533 414 291 34 27 chr10 114589577 114589725 -30999563 + MIR SINE MIR 1 149 -113 243 219 0 31 chr10 114589907 114589971 -30999317 + GA-rich Low_complexity Low_complexity 2 63 0 249 290 77 66 chr10 114591167 114591350 -30997938 + MIR SINE MIR 23 207 -55 355 384 5 20 chr10 114591489 114591687 -30997601 + MIR SINE MIR 22 216 -46 688 282 133 65 chr10 114592483 114592926 -30996362 + MLT1J LTR MaLR 1 473 -38 259 309 31 0 chr10 114594357 114594454 -30994834 - MIR SINE MIR -79 183 84 532 265 0 7 chr10 114594573 114594709 -30994579 - MIR SINE MIR -91 171 37 3349 148 40 36 chr10 114595142 114595812 -30993476 - L1MC1 LINE L1 0 6333 5661 6721 62 16 17 chr10 114595812 114595840 -30993448 - L1PA7 LINE L1 -3 6151 6124 2407 78 0 3 chr10 114595840 114596134 -30993154 + AluY SINE Alu 1 293 -18 6721 62 16 17 chr10 114596134 114597001 -30992287 - L1PA7 LINE L1 -30 6124 5257 408 229 0 2 chr10 114597101 114597199 -30992089 - L1MC1 LINE L1 -822 5522 5426 181 265 137 29 chr10 114597650 114597752 -30991536 + MER5A DNA MER1_type 21 133 -56 * 289 247 49 12 chr10 114597674 114597755 -30991533 - MER5A DNA MER1_type -41 148 65 241 254 34 0 chr10 114597962 114598021 -30991267 + MIR SINE MIR 53 113 -149 1247 259 41 39 chr10 114598907 114599366 -30989922 + MER113 DNA MER1_type? 1 460 -61 2706 237 80 7 chr10 114599948 114600662 -30988626 + MER20B DNA MER1_type 2 767 -16 462 36 0 0 chr10 114600995 114601051 -30988237 + (TC)n Simple_repeat Simple_repeat 1 56 0 208 347 47 28 chr10 114601727 114601940 -30987348 + L2 LINE L2 2168 2384 -930 203 290 0 0 chr10 114602341 114602400 -30986888 + MIR SINE MIR 41 99 -109 184 200 0 120 chr10 114604740 114604790 -30984498 + MIR3 SINE MIR 115 158 -50 230 328 11 118 chr10 114604963 114605149 -30984139 - L2 LINE L2 -89 3183 3018 216 204 0 20 chr10 114605970 114606019 -30983269 + (TTCA)n Simple_repeat Simple_repeat 3 50 0 620 280 35 35 chr10 114607175 114607432 -30981856 - L1MC4a LINE L1 -1866 5942 5686 2037 132 16 7 chr10 114609033 114609380 -30979908 - AluSq SINE Alu 0 313 7 216 229 84 96 chr10 114609439 114609522 -30979766 + L2 LINE L2 3232 3313 0 4422 29 0 10 chr10 114610055 114610753 -30978535 - SVA Other Other 0 1386 722 1282 140 5 32 chr10 114611245 114611466 -30977822 - MER20 DNA MER1_type -4 215 1 625 211 19 13 chr10 114611550 114611706 -30977582 + MER103 DNA DNA 8 164 -2 2043 136 23 0 chr10 114611904 114612205 -30977083 - AluSx SINE Alu -4 308 1 187 227 45 0 chr10 114612623 114612667 -30976621 - MIR3 SINE MIR -10 198 153 331 322 23 58 chr10 114612830 114613004 -30976284 - MIR3 SINE MIR -32 176 9 299 271 174 7 chr10 114613001 114613156 -30976132 + L3 LINE CR1 1352 1532 -45 * 273 250 28 0 chr10 114614363 114614435 -30974853 + MIR SINE MIR 50 123 -139 1654 221 81 12 chr10 114616338 114616759 -30972529 - MLT1D LTR MaLR -1 504 55 336 211 42 0 chr10 114616759 114616830 -30972458 - MLT1D LTR MaLR -414 91 18 492 294 33 8 chr10 114617051 114617250 -30972038 - MIR SINE MIR -19 243 40 1852 161 45 0 chr10 114617400 114617736 -30971552 - L1MA4 LINE L1 -4 6296 5946 1145 148 53 14 chr10 114617926 114618135 -30971153 - MER20 DNA MER1_type 0 219 3 252 341 0 0 chr10 114618397 114618479 -30970809 + MIR3 SINE MIR 103 184 -24 393 330 65 22 chr10 114620294 114620524 -30968764 - MIR SINE MIR 0 262 23 489 236 20 47 chr10 114620772 114620920 -30968368 - MIR3 SINE MIR -3 205 62 464 216 10 0 chr10 114621689 114621786 -30967502 - MER5A DNA MER1_type -83 106 9 327 200 0 0 chr10 114621954 114622019 -30967269 - MIR SINE MIR -118 144 80 729 202 42 29 chr10 114622100 114622305 -30966983 + MER63 DNA MER1_type 1 1688 0 218 292 123 41 chr10 114622868 114623087 -30966201 - L2 LINE L2 -219 3053 2817 516 175 10 0 chr10 114624437 114624534 -30964754 - MER5A DNA MER1_type -83 106 9 859 190 58 70 chr10 114624553 114624795 -30964493 + MER33 DNA MER1_type 1 239 -85 1320 186 0 51 chr10 114624795 114625069 -30964219 - AluJb SINE Alu -1 311 52 251 313 54 18 chr10 114625199 114625311 -30963977 - MIR3 SINE MIR -40 168 53 199 275 58 50 chr10 114626327 114626447 -30962841 + MIR SINE MIR 71 191 -71 338 293 37 49 chr10 114626758 114626922 -30962366 - L2 LINE L2 0 3272 3111 222 37 0 0 chr10 114626980 114627007 -30962281 + (GGAGA)n Simple_repeat Simple_repeat 1 27 0 494 186 218 96 chr10 114627047 114627092 -30962196 + MER96 DNA MER1_type? 1 39 -136 2593 63 0 0 chr10 114627092 114627391 -30961897 - AluY SINE Alu -12 299 1 494 186 218 96 chr10 114627391 114627501 -30961787 + MER96 DNA MER1_type? 39 175 0 1955 237 53 11 chr10 114628386 114628842 -30960446 - ERVL-C2 LTR ERVL -5250 514 40 266 89 0 89 chr10 114628876 114628921 -30960367 - MLT2C2 LTR ERVL -7 457 417 1598 185 92 64 chr10 114628951 114629374 -30959914 - MLT2B1 LTR ERVL -40 480 1 479 265 6 31 chr10 114629686 114629848 -30959440 + MIR SINE MIR 95 252 -10 216 222 74 0 chr10 114630130 114630184 -30959104 - L2 LINE L2 0 3313 3256 326 311 30 15 chr10 114630900 114631032 -30958256 - MIR SINE MIR -19 243 110 222 277 72 0 chr10 114632046 114632129 -30957159 + MIR SINE MIR 64 152 -56 248 263 15 113 chr10 114632213 114632346 -30956942 - MER5A DNA MER1_type -7 182 63 189 154 0 0 chr10 114632756 114632795 -30956493 + (CA)n Simple_repeat Simple_repeat 2 40 0 642 148 15 15 chr10 114635458 114635593 -30953695 + CT-rich Low_complexity Low_complexity 2 136 0 1336 222 59 39 chr10 114635599 114635905 -30953383 - AluJb SINE Alu 0 312 1 369 325 12 44 chr10 114636902 114637151 -30952137 - L2 LINE L2 0 3313 3073 1959 219 52 29 chr10 114637858 114638343 -30950945 - MLT1D LTR MaLR 0 505 10 481 264 101 14 chr10 114638475 114638623 -30950665 - MER91A DNA MER1_type -35 161 1 380 283 23 24 chr10 114640502 114640680 -30948608 + MIR3 SINE MIR 12 188 -62 212 143 0 0 chr10 114641309 114641344 -30947944 - MIR SINE MIR -64 144 110 215 290 30 61 chr10 114644759 114644890 -30944398 - MIR SINE MIR -118 144 18 211 186 71 0 chr10 114645232 114645302 -30943986 + (TA)n Simple_repeat Simple_repeat 2 76 0 491 0 17 0 chr10 114645304 114645363 -30943925 + (TCTA)n Simple_repeat Simple_repeat 1 60 0 202 380 37 27 chr10 114645992 114646179 -30943109 - L2 LINE L2 -222 3050 2862 22 0 0 0 chr10 114646708 114646730 -30942558 + GC_rich Low_complexity Low_complexity 1 22 0 3317 216 62 103 chr10 114647708 114649426 -30939862 - L1MEc LINE L1 -3661 2554 887 853 225 42 38 chr10 114649444 114649657 -30939631 - MER20 DNA MER1_type -5 214 1 2749 235 65 33 chr10 114649663 114650476 -30938812 - L1MEc LINE L1 -5521 875 37 425 294 24 16 chr10 114650483 114650609 -30938679 - MIR SINE MIR -62 146 20 2231 95 3 3 chr10 114651194 114651488 -30937800 + AluSx SINE Alu 1 294 -18 445 319 165 17 chr10 114651596 114651947 -30937341 + L2 LINE L2 2833 3235 -78 219 239 15 15 chr10 114653526 114653593 -30935695 + GA-rich Low_complexity Low_complexity 1 67 0 1669 232 18 3 chr10 114655354 114655690 -30933598 + MER58B DNA MER1_type 1 341 0 363 344 7 26 chr10 114656852 114657003 -30932285 + MIR SINE MIR 20 167 -95 344 280 0 11 chr10 114657025 114657118 -30932170 + L2 LINE L2 3221 3312 -1 1175 272 94 30 chr10 114657288 114657693 -30931595 + MLT1J2 LTR MaLR 1 431 -19 201 333 15 15 chr10 114657799 114657865 -30931423 + L2 LINE L2 3201 3266 -6 786 244 85 16 chr10 114658662 114658920 -30930368 + LTR16A1 LTR ERVL 180 455 -2 2069 102 0 18 chr10 114659363 114659647 -30929641 + AluSg SINE Alu 1 279 -31 796 290 28 24 chr10 114659904 114660159 -30929129 - MIR SINE MIR 0 262 7 221 268 70 28 chr10 114660201 114660272 -30929016 - L2 LINE L2 -2 3311 3238 362 237 0 0 chr10 114660760 114660836 -30928452 - MIR3 SINE MIR -12 196 121 453 343 36 0 chr10 114661493 114661678 -30927610 - MIR SINE MIR -52 210 19 446 316 184 0 chr10 114661807 114662019 -30927269 + MIR SINE MIR 9 259 -3 2320 208 13 25 chr10 114662382 114662907 -30926381 + Charlie1b DNA MER1_type 1 519 -4 979 265 68 34 chr10 114663025 114663466 -30925822 + L1ME4a LINE L1 5477 5932 -189 21 0 0 0 chr10 114663539 114663560 -30925728 + AT_rich Low_complexity Low_complexity 1 21 0 2450 75 0 0 chr10 114663947 114664252 -30925036 + AluY SINE Alu 1 305 -6 198 182 0 0 chr10 114665752 114665785 -30923503 - L2 LINE L2 -23 3249 3217 243 0 0 0 chr10 114666982 114667009 -30922279 + (TG)n Simple_repeat Simple_repeat 2 28 0 528 199 59 52 chr10 114668983 114669119 -30920169 + MER58B DNA MER1_type 201 337 -4 554 311 89 39 chr10 114670193 114670482 -30918806 + L1ME3A LINE L1 5646 5947 -223 1956 197 49 33 chr10 114671570 114672021 -30917267 + MER31B LTR ERV1 1 458 -8 217 324 106 78 chr10 114672542 114672965 -30916323 - L2 LINE L2 -27 3245 2811 322 249 90 94 chr10 114673547 114673618 -30915670 - MIR SINE MIR -43 219 149 2315 96 13 0 chr10 114673618 114673921 -30915367 - AluSx SINE Alu -3 309 3 322 249 90 94 chr10 114673921 114674050 -30915238 - MIR SINE MIR -113 149 20 589 135 0 149 chr10 114674367 114674508 -30914780 + FRAM SINE Alu 41 160 -16 200 311 0 0 chr10 114675932 114675993 -30913295 + (TAA)n Simple_repeat Simple_repeat 1 61 0 441 303 67 24 chr10 114676016 114676181 -30913107 - MIR SINE MIR -61 201 30 4353 142 34 13 chr10 114677212 114677959 -30911329 - L1MA8 LINE L1 0 6291 5530 351 248 149 28 chr10 114678118 114678259 -30911029 - MIR3 SINE MIR -39 169 12 181 299 93 19 chr10 114678430 114678537 -30910751 - MIR SINE MIR -74 134 20 2342 87 7 0 chr10 114679263 114679561 -30909727 + AluSp SINE Alu 1 300 -13 306 0 0 0 chr10 114681358 114681392 -30907896 + (TG)n Simple_repeat Simple_repeat 1 34 0 385 294 65 16 chr10 114681437 114681621 -30907667 - MIR SINE MIR -14 248 56 321 254 102 0 chr10 114682298 114682450 -30906838 - MER102a DNA MER1_type -4 326 157 304 396 19 0 chr10 114682864 114683023 -30906265 + MIR3 SINE MIR 23 184 -24 186 167 0 0 chr10 114683720 114683756 -30905532 + (TAA)n Simple_repeat Simple_repeat 3 38 0 469 263 26 19 chr10 114683772 114683928 -30905360 - MIR SINE MIR -14 248 92 335 316 161 0 chr10 114683997 114684165 -30905123 - MIR3 SINE MIR -3 205 11 337 266 59 0 chr10 114684509 114684629 -30904659 + MIR SINE MIR 37 164 -62 2745 58 28 0 chr10 114684770 114685096 -30904192 - L1PA8 LINE L1 -15 6157 5823 21 36 0 0 chr10 114686803 114686831 -30902457 + AT_rich Low_complexity Low_complexity 1 28 0 2346 88 3 0 chr10 114687452 114687748 -30901540 + AluSx SINE Alu 1 297 -15 385 276 92 12 chr10 114688966 114689129 -30900159 + MIR SINE MIR 62 237 -25 1961 225 136 25 chr10 114689392 114690007 -30899281 + L1M3e LINE L1 1499 2191 -4846 201 284 184 18 chr10 114690053 114690162 -30899126 - MIR SINE MIR -94 168 42 22 35 0 0 chr10 114690186 114690215 -30899073 + AT_rich Low_complexity Low_complexity 1 29 0 452 337 30 0 chr10 114690612 114690811 -30898477 + MIR SINE MIR 58 262 0 460 299 35 23 chr10 114690951 114691125 -30898163 - MIR3 SINE MIR -17 191 16 1490 163 6 118 chr10 114692553 114692885 -30896403 - AluJo SINE Alu -7 295 1 238 270 48 0 chr10 114692886 114692949 -30896339 + MIR SINE MIR 89 154 -108 510 284 101 58 chr10 114692967 114693312 -30895976 - MLT1L LTR MaLR -12 603 244 248 271 8 101 chr10 114693362 114693491 -30895797 - MLT1L LTR MaLR -498 117 1 2055 107 11 0 chr10 114693676 114693947 -30895341 - AluSx SINE Alu -38 274 1 190 270 34 56 chr10 114694060 114694149 -30895139 - MER5A DNA MER1_type -22 167 81 181 235 59 73 chr10 114694281 114694349 -30894939 + L2 LINE L2 3169 3235 -37 350 247 151 59 chr10 114694910 114694929 -30894359 - MIR SINE MIR 0 262 2 420 291 96 23 chr10 114694929 114695149 -30894139 - MIR SINE MIR -25 237 2 571 302 23 6 chr10 114695198 114695370 -30893918 - MER5B DNA MER1_type 0 178 4 287 342 40 48 chr10 114695492 114695764 -30893524 - L2 LINE L2 -189 3083 2814 390 268 115 60 chr10 114695928 114696111 -30893177 + L1ME4a LINE L1 5713 5905 -216 350 329 55 50 chr10 114696153 114696515 -30892773 - L2 LINE L2 -706 2608 2245 188 382 67 0 chr10 114696624 114696713 -30892575 - L2 LINE L2 -8 3264 3170 2026 124 59 16 chr10 114696825 114697148 -30892140 - MER1B DNA MER1_type 0 337 1 248 326 30 30 chr10 114698186 114698321 -30890967 + L2 LINE L2 2721 2855 -459 242 361 165 34 chr10 114698381 114698647 -30890641 + L2 LINE L2 2932 3232 -40 201 352 77 11 chr10 114699145 114699236 -30890052 + L2 LINE L2 3137 3233 -39 1597 140 11 7 chr10 114699782 114700054 -30889234 - MER41B LTR ERV1 -10 625 353 268 200 0 0 chr10 114700160 114700205 -30889083 - MER41B LTR ERV1 -238 397 353 315 0 0 0 chr10 114700209 114700244 -30889044 + (TA)n Simple_repeat Simple_repeat 1 35 0 3928 42 0 2 chr10 114700247 114700726 -30888562 - L1PA5 LINE L1 0 6154 5677 2062 45 0 0 chr10 114700726 114700992 -30888296 + L1P LINE L1 4475 4740 -1406 1900 154 22 3 chr10 114700992 114701350 -30887938 - MER41B LTR ERV1 -270 365 1 3118 244 69 37 chr10 114702271 114703141 -30886147 + L1ME3A LINE L1 3448 4379 -1767 1945 128 17 10 chr10 114703141 114703430 -30885858 - AluSx SINE Alu -21 291 1 3118 244 69 37 chr10 114703430 114703916 -30885372 + L1ME3A LINE L1 4379 4848 -1298 757 188 0 0 chr10 114703924 114704052 -30885236 - FRAM SINE Alu -13 163 36 2420 251 62 40 chr10 114704064 114705238 -30884050 + L1ME3A LINE L1 4832 6039 -131 2004 113 14 25 chr10 114705238 114705563 -30883725 - AluSx SINE Alu 0 322 1 2420 251 62 40 chr10 114705563 114705693 -30883595 + L1ME3A LINE L1 6039 6165 -5 732 231 62 27 chr10 114705943 114706168 -30883120 + MIR SINE MIR 18 250 -12 1948 138 26 0 chr10 114707615 114707919 -30881369 - AluSx SINE Alu 0 312 1 339 308 37 79 chr10 114710311 114710525 -30878763 + MIR SINE MIR 35 239 -23 241 324 20 20 chr10 114710735 114710837 -30878451 + MER5A DNA MER1_type 67 168 -21 1539 162 16 67 chr10 114711324 114711639 -30877649 - AluJo SINE Alu -3 309 11 252 287 128 72 chr10 114711894 114712087 -30877201 - MIR SINE MIR -42 220 17 824 243 34 0 chr10 114712087 114712264 -30877024 + MER5A DNA MER1_type 1 183 -6 252 0 0 0 chr10 114712264 114712292 -30876996 + (A)n Simple_repeat Simple_repeat 1 28 0 509 235 140 6 chr10 114712343 114712498 -30876790 + MER5A DNA MER1_type 4 182 -7 437 331 17 45 chr10 114713401 114713579 -30875709 - MER5A DNA MER1_type 0 189 17 331 338 58 19 chr10 114713749 114713903 -30875385 - L2 LINE L2 -18 3295 3136 203 152 65 0 chr10 114714991 114715037 -30874251 + (CTAA)n Simple_repeat Simple_repeat 3 51 0 2253 176 37 19 chr10 114715038 114715550 -30873738 - L1MB5 LINE L1 -26 6148 5628 211 323 73 43 chr10 114715964 114716128 -30873160 - L2 LINE L2 -208 3064 2896 21 0 0 0 chr10 114716602 114716623 -30872665 + AT_rich Low_complexity Low_complexity 1 21 0 210 307 80 11 chr10 114716683 114716771 -30872517 + L2 LINE L2 3177 3270 -2 234 0 0 0 chr10 114717559 114717585 -30871703 + (CA)n Simple_repeat Simple_repeat 2 27 0 1559 190 77 61 chr10 114718351 114718680 -30870608 + MLT1D LTR MaLR 1 342 -163 1615 148 65 59 chr10 114718680 114719051 -30870237 - THE1C LTR MaLR -2 373 1 1559 190 77 61 chr10 114719051 114719216 -30870072 + MLT1D LTR MaLR 342 503 -2 1466 214 15 12 chr10 114719281 114719613 -30869675 + MLT1A1 LTR MaLR 33 365 0 2330 133 44 49 chr10 114720329 114720759 -30868529 - MSTC LTR MaLR 0 428 1 43 35 0 0 chr10 114722012 114722069 -30867219 + AT_rich Low_complexity Low_complexity 1 57 0 181 318 151 6 chr10 114722123 114722302 -30866986 - L2 LINE L2 -204 3068 2864 1071 255 75 27 chr10 114722732 114723293 -30865995 - L1ME4a LINE L1 -4 6117 5530 2021 269 89 65 chr10 114723308 114724312 -30864976 + L2 LINE L2 1866 2893 -421 973 283 14 30 chr10 114724323 114724620 -30864668 + L2 LINE L2 3022 3313 0 23 33 0 0 chr10 114724685 114724715 -30864573 + AT_rich Low_complexity Low_complexity 1 30 0 2890 142 20 4 chr10 114724715 114725215 -30864073 - L1MB2 LINE L1 -7 6164 5657 472 185 74 9 chr10 114725303 114725411 -30863877 + L2 LINE L2 1866 1980 -1334 1913 118 46 38 chr10 114725415 114725788 -30863500 - L1MB2 LINE L1 -518 5665 5290 763 220 18 46 chr10 114726039 114726257 -30863031 - MER20 DNA MER1_type -7 212 1 746 184 42 9 chr10 114727355 114727552 -30861736 - L1MB1 LINE L1 -2 6169 5976 1459 188 57 14 chr10 114727678 114727960 -30861328 - AluJb SINE Alu -18 294 1 515 268 66 31 chr10 114727989 114728131 -30861157 - MIR SINE MIR -10 252 98 2302 95 0 0 chr10 114728131 114728416 -30860872 - AluSq SINE Alu -28 285 1 515 268 66 31 chr10 114728416 114728501 -30860787 - MIR SINE MIR -164 98 17 238 246 0 136 chr10 114728905 114729015 -30860273 + MER102a DNA MER1_type 236 330 0 342 0 0 0 chr10 114729304 114729342 -30859946 + (TG)n Simple_repeat Simple_repeat 1 38 0 376 240 74 16 chr10 114729397 114729518 -30859770 + MIR SINE MIR 92 219 -43 265 349 8 8 chr10 114729735 114729867 -30859421 + (TG)n Simple_repeat Simple_repeat 1 132 0 2153 112 0 14 chr10 114730140 114730435 -30858853 - AluSx SINE Alu -9 303 13 589 349 98 47 chr10 114731083 114732039 -30857249 - L2 LINE L2 -471 2843 1839 617 121 11 0 chr10 114732095 114732186 -30857102 + AluSq/x SINE Alu 39 130 -182 238 242 165 55 chr10 114732255 114732346 -30856942 - MIR SINE MIR -131 131 31 342 45 0 0 chr10 114732624 114732668 -30856620 + (GA)n Simple_repeat Simple_repeat 1 44 0 18337 37 0 0 chr10 114732712 114735071 -30854217 - L1PA3 LINE L1 -2011 4135 1776 10319 32 2 0 chr10 114735071 114737073 -30852215 + L1PA3 LINE L1 4151 6155 0 2418 77 0 0 chr10 114737721 114738021 -30851267 - AluSc SINE Alu 0 309 10 245 323 55 61 chr10 114738055 114738219 -30851069 - MIR SINE MIR -66 196 34 442 331 115 32 chr10 114738369 114739210 -30850078 + L2 LINE L2 2255 3208 -105 183 42 0 0 chr10 114739560 114739584 -30849704 + (TG)n Simple_repeat Simple_repeat 1 24 0 243 339 17 75 chr10 114742071 114742245 -30847043 + L3 LINE CR1 909 1072 -505 21 36 0 0 chr10 114742606 114742634 -30846654 + AT_rich Low_complexity Low_complexity 1 28 0 1810 176 0 26 chr10 114742994 114743307 -30845981 - AluSx SINE Alu -7 305 1 438 259 98 12 chr10 114743903 114744084 -30845204 - L1ME3A LINE L1 -2 6162 5971 232 278 14 0 chr10 114744431 114744503 -30844785 + L1ME LINE L1 5560 5632 -489 338 273 68 0 chr10 114744510 114744642 -30844646 + L1ME LINE L1 5678 5818 -303 11046 120 24 7 chr10 114744701 114747054 -30842234 - Tigger1 DNA MER2_type 0 2418 26 287 171 13 0 chr10 114747164 114747240 -30842048 + GA-rich Low_complexity Low_complexity 3 79 0 295 292 108 22 chr10 114748008 114748193 -30841095 - MIR SINE MIR -25 237 37 1274 284 47 19 chr10 114749975 114750444 -30838844 + LTR16C LTR ERVL 3 484 -7 1079 155 107 1 chr10 114750611 114750988 -30838300 + MLT1D LTR MaLR 54 505 0 1713 144 4 146 chr10 114751214 114751491 -30837797 - MLT1B LTR MaLR 0 390 200 2302 117 3 0 chr10 114751491 114751800 -30837488 - AluSg SINE Alu 0 310 1 1713 144 4 146 chr10 114751800 114751974 -30837314 - MLT1B LTR MaLR -190 200 3 212 350 21 42 chr10 114752675 114752818 -30836470 + L2 LINE L2 2915 3054 -218 237 179 0 0 chr10 114754107 114754146 -30835142 - L2 LINE L2 -8 3305 3267 2407 232 93 49 chr10 114754439 114755149 -30834139 - L1ME1 LINE L1 -5 6161 5483 2260 132 0 0 chr10 114755149 114755459 -30833829 - AluSg SINE Alu 0 310 1 2407 232 93 49 chr10 114755459 114756448 -30832840 - L1ME1 LINE L1 -683 5483 4409 554 236 51 0 chr10 114756509 114756666 -30832622 + L1M4 LINE L1 2570 2734 -3412 188 346 0 39 chr10 114757775 114757853 -30831435 - L2 LINE L2 -5 3267 3193 329 337 43 12 chr10 114758205 114758368 -30830920 + MIR SINE MIR 20 187 -75 453 363 15 15 chr10 114759284 114759488 -30829800 - L3 LINE CR1 -62 1515 1312 324 0 0 0 chr10 114760057 114760093 -30829195 + (TGAA)n Simple_repeat Simple_repeat 1 36 0 192 308 0 0 chr10 114760202 114760241 -30829047 - L2 LINE L2 -22 3291 3253 216 163 0 0 chr10 114760316 114760359 -30828929 + (TG)n Simple_repeat Simple_repeat 2 44 0 187 30 30 30 chr10 114760472 114760505 -30828783 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 393 309 22 22 chr10 114761107 114761246 -30828042 - MIR SINE MIR -76 186 48 245 299 138 17 chr10 114761225 114761399 -30827889 - L2 LINE L2 -1208 2106 1912 * 324 291 81 20 chr10 114761824 114761972 -30827316 - MIR SINE MIR -88 174 18 894 201 25 20 chr10 114762517 114762721 -30826567 - MER3 DNA MER1_type -1 208 4 350 292 23 62 chr10 114762732 114762862 -30826426 + MIR SINE MIR 22 146 -116 644 303 98 8 chr10 114762880 114763114 -30826174 - MIR SINE MIR -3 259 5 297 286 36 9 chr10 114763119 114763231 -30826057 + MIR SINE MIR 147 261 -1 355 276 35 9 chr10 114763395 114763511 -30825777 + MIR3 SINE MIR 89 207 -1 226 316 0 0 chr10 114763959 114764016 -30825272 + T-rich Low_complexity Low_complexity 3 59 0 650 289 57 61 chr10 114764239 114764762 -30824526 - LTR33 LTR ERVL 0 521 1 358 315 0 83 chr10 114764967 114765224 -30824064 + MIR SINE MIR 20 250 -12 259 351 24 36 chr10 114765360 114765525 -30823763 - L2 LINE L2 -131 3141 2979 1981 288 112 20 chr10 114765581 114765952 -30823336 + L2 LINE L2 2024 2360 -953 2222 107 10 0 chr10 114765952 114766243 -30823045 - AluSx SINE Alu -18 294 1 1981 288 112 20 chr10 114766243 114766977 -30822311 + L2 LINE L2 2360 3233 -80 298 279 50 50 chr10 114767196 114767336 -30821952 - L2 LINE L2 -10 3303 3164 248 235 161 0 chr10 114767374 114767455 -30821833 - MIR SINE MIR -29 233 140 256 326 11 11 chr10 114767754 114767843 -30821445 - L2 LINE L2 -26 3246 3158 2010 155 0 0 chr10 114768642 114768951 -30820337 - AluSx SINE Alu -3 309 1 381 265 72 50 chr10 114769059 114769240 -30820048 - MIR SINE MIR -15 247 63 212 250 0 0 chr10 114769394 114769438 -30819850 - L2 LINE L2 -91 3222 3179 267 104 0 0 chr10 114769508 114769556 -30819732 + (CAAA)n Simple_repeat Simple_repeat 2 49 0 1026 238 82 15 chr10 114771188 114771528 -30817760 - L1ME1 LINE L1 -5 6161 5799 605 285 46 73 chr10 114771759 114772061 -30817227 - L2 LINE L2 0 3313 3020 189 299 117 58 chr10 114772232 114772369 -30816919 + L3 LINE CR1 1040 1184 -393 196 192 154 0 chr10 114772920 114772972 -30816316 + MIR SINE MIR 133 192 -70 1065 309 77 47 chr10 114772973 114773970 -30815318 + L1ME3A LINE L1 3749 4714 -1456 321 47 0 0 chr10 114773970 114774013 -30815275 + (CA)n Simple_repeat Simple_repeat 2 44 0 1065 309 77 47 chr10 114774013 114774066 -30815222 + L1ME3A LINE L1 4714 4764 -1406 489 110 0 0 chr10 114774066 114774139 -30815149 + (TA)n Simple_repeat Simple_repeat 1 73 0 1065 309 77 47 chr10 114774139 114774666 -30814622 + L1ME3A LINE L1 4764 5274 -896 1846 158 75 23 chr10 114774666 114775013 -30814275 + MLT1A1 LTR MaLR 1 365 0 1065 309 77 47 chr10 114775013 114775565 -30813723 + L1ME3A LINE L1 5274 5945 -225 2289 116 0 0 chr10 114775728 114776031 -30813257 - AluSg SINE Alu -7 303 1 228 35 0 0 chr10 114776131 114776160 -30813128 + (TA)n Simple_repeat Simple_repeat 1 29 0 2308 99 3 0 chr10 114776160 114776452 -30812836 - AluSc SINE Alu -16 293 1 22 0 0 0 chr10 114776452 114776474 -30812814 + AT_rich Low_complexity Low_complexity 1 22 0 532 316 74 30 chr10 114778017 114778381 -30810907 - MLT1K LTR MaLR -20 568 189 192 250 103 29 chr10 114779227 114779295 -30809993 - MIR SINE MIR -64 144 72 290 309 60 0 chr10 114779758 114779842 -30809446 + L2 LINE L2 3184 3272 0 1475 198 119 3 chr10 114781115 114781468 -30807820 - MSTD LTR MaLR -2 394 1 1849 155 146 37 chr10 114781891 114782290 -30806998 + L1MC2 LINE L1 5835 6292 -52 1806 106 0 16 chr10 114782290 114782544 -30806744 - AluSq SINE Alu -1 312 63 1849 155 146 37 chr10 114782544 114782603 -30806685 + L1MC2 LINE L1 6292 6343 -1 328 271 124 0 chr10 114785673 114785802 -30803486 + L2 LINE L2 3161 3305 -8 414 0 0 0 chr10 114785841 114785887 -30803401 + (CA)n Simple_repeat Simple_repeat 2 47 0 428 208 121 20 chr10 114785956 114786105 -30803183 + L2 LINE L2 2407 2570 -744 893 252 59 99 chr10 114786118 114786442 -30802846 + L2 LINE L2 2441 2777 -536 3472 132 9 2 chr10 114786442 114786994 -30802294 + L1PA16 LINE L1 5602 6157 -9 893 252 59 99 chr10 114786994 114787302 -30801986 + L2 LINE L2 2777 3096 -217 403 208 0 0 chr10 114787302 114787403 -30801885 + L1MA7 LINE L1 6191 6291 0 893 252 59 99 chr10 114787403 114787488 -30801800 + L2 LINE L2 3096 3183 -130 2586 223 44 13 chr10 114787488 114788120 -30801168 - MER82 DNA MER2_type -1 652 1 893 252 59 99 chr10 114788120 114788317 -30800971 + L2 LINE L2 3183 3313 0 552 328 89 8 chr10 114788551 114788786 -30800502 + MIR SINE MIR 9 262 0 519 180 20 9 chr10 114788909 114789066 -30800222 - MER58B DNA MER1_type 0 341 27 719 213 55 18 chr10 114789090 114789254 -30800034 - MER5B DNA MER1_type -8 170 1 405 324 92 7 chr10 114789880 114790022 -30799266 + MER5A DNA MER1_type 35 188 -1 1122 259 90 76 chr10 114790138 114790601 -30798687 - MLT1H LTR MaLR 0 549 77 2247 121 0 0 chr10 114790601 114790898 -30798390 - AluSq SINE Alu -16 297 1 1122 259 90 76 chr10 114790898 114790936 -30798352 - MLT1H LTR MaLR -472 77 41 2068 116 0 16 chr10 114791018 114791321 -30797967 + AluSq SINE Alu 1 298 -15 390 21 0 0 chr10 114791323 114791370 -30797918 + (CA)n Simple_repeat Simple_repeat 2 48 0 405 382 16 36 chr10 114791462 114791768 -30797520 - L3 LINE CR1 -3 1574 1275 210 200 17 17 chr10 114791937 114791997 -30797291 + G-rich Low_complexity Low_complexity 2 61 0 2158 109 0 13 chr10 114792233 114792535 -30796753 + AluSq SINE Alu 1 298 -15 369 0 0 0 chr10 114792537 114792578 -30796710 + (CA)n Simple_repeat Simple_repeat 2 42 0 537 355 55 49 chr10 114792670 114793121 -30796167 - L3 LINE CR1 -3 1574 1121 2241 113 3 0 chr10 114793125 114793427 -30795861 + AluSq SINE Alu 1 303 -10 193 349 0 0 chr10 114793495 114793561 -30795727 + MIR SINE MIR 81 146 -116 622 305 63 0 chr10 114794510 114794700 -30794588 + MIR3 SINE MIR 3 204 -4 583 303 90 82 chr10 114795181 114795680 -30793608 - L2 LINE L2 -5 3308 2806 2389 93 0 0 chr10 114796679 114796979 -30792309 - AluSg SINE Alu -10 300 1 326 340 75 34 chr10 114797416 114797684 -30791604 + L2 LINE L2 2977 3255 -17 560 107 0 0 chr10 114797690 114797765 -30791523 + AluS SINE Alu 1 75 -238 1749 159 73 105 chr10 114798547 114799025 -30790263 - MLT1C LTR MaLR -4 463 1 405 238 49 65 chr10 114799798 114799983 -30789305 - L1ME4a LINE L1 -16 6105 5924 227 299 68 17 chr10 114800097 114800214 -30789074 - L1ME4a LINE L1 -4 6117 5995 257 325 0 0 chr10 114800275 114800358 -30788930 + L2 LINE L2 3190 3272 0 2287 107 0 3 chr10 114800665 114800965 -30788323 - AluSc SINE Alu -8 301 3 280 266 0 0 chr10 114801499 114801563 -30787725 + (CAGA)n Simple_repeat Simple_repeat 4 67 0 430 152 14 22 chr10 114802178 114802316 -30786972 + (TA)n Simple_repeat Simple_repeat 2 138 0 392 250 22 0 chr10 114802618 114802710 -30786578 - L1MC4 LINE L1 -1334 6708 6615 211 239 0 0 chr10 114802712 114802758 -30786530 + (TA)n Simple_repeat Simple_repeat 1 46 0 283 281 45 106 chr10 114803295 114803494 -30785794 - L2 LINE L2 -45 3227 3041 184 200 0 0 chr10 114803527 114803562 -30785726 + MIR SINE MIR 156 190 -72 228 67 0 0 chr10 114803586 114803616 -30785672 + (TTA)n Simple_repeat Simple_repeat 2 31 0 537 247 162 0 chr10 114804460 114804614 -30784674 + MER5A DNA MER1_type 11 189 0 394 276 45 6 chr10 114804787 114804943 -30784345 - MER103 DNA DNA -2 164 3 1647 130 9 127 chr10 114805299 114805629 -30783659 + AluJo SINE Alu 1 291 -11 194 57 57 0 chr10 114805901 114805936 -30783352 + T-rich Low_complexity Low_complexity 4 40 0 266 85 0 43 chr10 114806235 114806282 -30783006 + (GAAA)n Simple_repeat Simple_repeat 2 46 0 210 333 11 43 chr10 114806911 114807004 -30782284 + MIR SINE MIR 107 196 -66 27 0 0 0 chr10 114808243 114808270 -30781018 + AT_rich Low_complexity Low_complexity 1 27 0 6039 16 1 1 chr10 114809128 114809810 -30779478 + L1PA4 LINE L1 5374 6055 -100 363 329 64 36 chr10 114810099 114810348 -30778940 - L1ME4a LINE L1 -215 5906 5651 2230 135 29 6 chr10 114810913 114811254 -30778034 + L1PA16 LINE L1 5818 6166 0 192 152 0 0 chr10 114811271 114811304 -30777984 + (TATATG)n Simple_repeat Simple_repeat 2 34 0 240 35 0 0 chr10 114811304 114811333 -30777955 + (CA)n Simple_repeat Simple_repeat 2 30 0 1947 243 65 50 chr10 114811451 114812031 -30777257 + MLT1E LTR MaLR 3 591 -2 1596 203 56 25 chr10 114814186 114814545 -30774743 - MLT1A2 LTR MaLR -4 370 1 360 247 118 77 chr10 114814711 114815177 -30774111 - L1ME4a LINE L1 0 6121 5637 257 264 27 27 chr10 114815320 114815430 -30773858 - L1ME4a LINE L1 -2379 5429 5320 267 273 62 68 chr10 114816143 114816465 -30772823 - L1ME4a LINE L1 -1444 4702 4383 193 348 58 32 chr10 114817279 114817434 -30771854 - L2 LINE L2 -168 3104 2946 432 213 189 0 chr10 114817494 114817616 -30771672 - MER20 DNA MER1_type -1 218 74 327 282 46 46 chr10 114819892 114820023 -30769265 + MIR SINE MIR 20 150 -58 346 174 81 29 chr10 114820067 114820237 -30769051 + L1MA4A LINE L1 6041 6280 -23 364 299 15 29 chr10 114820241 114820378 -30768910 + MER5A DNA MER1_type 52 186 -3 262 244 38 76 chr10 114820890 114821021 -30768267 + MLT1H LTR MaLR 47 172 -377 394 196 29 94 chr10 114821140 114821278 -30768010 + MLT1H LTR MaLR 421 549 0 190 345 82 80 chr10 114821500 114821877 -30767411 - L2 LINE L2 -344 2970 2593 2325 98 7 0 chr10 114821930 114822237 -30767051 + AluSp SINE Alu 3 311 -2 2385 87 0 3 chr10 114822567 114822866 -30766422 - AluY SINE Alu -13 298 1 322 47 0 0 chr10 114822898 114822941 -30766347 + AluY SINE Alu 257 299 -3 720 256 109 46 chr10 114822944 114823311 -30765977 - LTR16A LTR ERVL -47 403 14 184 281 16 16 chr10 114823434 114823498 -30765790 - MIR SINE MIR -14 248 185 330 266 169 39 chr10 114823523 114823677 -30765611 + MIR SINE MIR 6 179 -83 396 182 0 0 chr10 114824601 114824667 -30764621 - MIR SINE MIR -57 151 86 523 308 15 0 chr10 114825310 114825443 -30763845 - L2 LINE L2 0 3272 3138 941 181 14 134 chr10 114825589 114825866 -30763422 - MLT2B1 LTR ERVL 0 520 277 531 204 0 0 chr10 114825868 114825971 -30763317 - MLT2D LTR ERVL -229 324 222 1287 144 14 14 chr10 114826015 114826230 -30763058 - Ricksha DNA DNA -1478 568 354 201 390 25 8 chr10 114826405 114826523 -30762765 + MIR3 SINE MIR 40 159 -49 376 222 102 84 chr10 114826530 114826697 -30762591 + MER5C DNA MER1_type 6 175 -149 320 283 116 91 chr10 114828389 114828425 -30760863 + L2 LINE L2 1681 1715 -1599 354 226 12 0 chr10 114828425 114828509 -30760779 + L1MA8 LINE L1 6205 6289 -2 1838 159 0 7 chr10 114828516 114828812 -30760476 + AluSg SINE Alu 1 294 -16 320 283 116 91 chr10 114828812 114829482 -30759806 + L2 LINE L2 1720 2413 -901 21 0 0 0 chr10 114829879 114829900 -30759388 + AT_rich Low_complexity Low_complexity 1 21 0 362 229 0 31 chr10 114830698 114830794 -30758494 + MIR SINE MIR 110 202 -60 311 301 120 0 chr10 114831513 114831646 -30757642 - MIR SINE MIR -110 152 4 356 317 109 6 chr10 114832712 114832800 -30756488 - MIR SINE MIR -21 241 164 1900 103 3 35 chr10 114832800 114833090 -30756198 - L1MA1 LINE L1 0 6302 6022 356 317 109 6 chr10 114833090 114833184 -30756104 - MIR SINE MIR -98 164 40 282 160 0 0 chr10 114833907 114833957 -30755331 + T-rich Low_complexity Low_complexity 1 50 0 649 291 23 0 chr10 114834163 114834338 -30754950 - MIR SINE MIR -36 226 48 252 292 114 78 chr10 114835212 114835431 -30753857 + MIR SINE MIR 33 259 -3 330 278 26 53 chr10 114835489 114835640 -30753648 + MIR SINE MIR 31 177 -85 274 342 133 8 chr10 114835641 114835761 -30753527 - L2 LINE L2 -2 3270 3136 348 224 149 15 chr10 114836488 114836622 -30752666 + MIR SINE MIR 21 172 -90 406 241 71 88 chr10 114837047 114837217 -30752071 - MIR3 SINE MIR -22 186 20 448 284 93 22 chr10 114837365 114837548 -30751740 - MIR SINE MIR -62 200 5 185 316 70 0 chr10 114838031 114838088 -30751200 + L2 LINE L2 3250 3310 -3 728 232 24 29 chr10 114838437 114838644 -30750644 + MER112 DNA MER1_type 55 260 0 405 0 0 0 chr10 114838792 114838837 -30750451 + (CA)n Simple_repeat Simple_repeat 2 46 0 285 312 59 50 chr10 114839682 114839903 -30749385 + MIR SINE MIR 34 256 -6 754 305 22 13 chr10 114839952 114840178 -30749110 - MIR SINE MIR -21 241 14 238 289 11 56 chr10 114840238 114840319 -30748969 - MER5B DNA MER1_type -1 177 101 345 241 68 84 chr10 114840319 114840510 -30748778 - MER5A DNA MER1_type -1 188 1 389 215 0 93 chr10 114840510 114840617 -30748671 + MER5B DNA MER1_type 74 170 -8 245 186 0 0 chr10 114840765 114840808 -30748480 + L1MA7 LINE L1 6073 6115 -176 5990 124 46 8 chr10 114840836 114842052 -30747236 - L1PA14 LINE L1 -1 6160 4912 790 191 13 0 chr10 114842052 114842204 -30747084 + L1PA14 LINE L1 4763 4916 -1230 979 153 26 26 chr10 114842204 114842387 -30746901 + L1MA7 LINE L1 6096 6285 -6 22 56 0 0 chr10 114842387 114842423 -30746865 + AT_rich Low_complexity Low_complexity 1 36 0 292 250 0 0 chr10 114843279 114843335 -30745953 - L2 LINE L2 -3 3269 3214 413 212 83 30 chr10 114843696 114843828 -30745460 - MIR SINE MIR -4 258 120 2173 98 3 44 chr10 114843992 114844307 -30744981 - AluSg SINE Alu -8 302 1 517 294 63 17 chr10 114845224 114845462 -30743826 + MIR SINE MIR 13 261 -1 243 289 36 0 chr10 114845495 114845578 -30743710 + MIR SINE MIR 145 230 -32 2510 47 7 7 chr10 114845993 114846294 -30742994 - AluY SINE Alu -10 301 1 1132 174 41 41 chr10 114846298 114846516 -30742772 + MER20 DNA MER1_type 1 218 -1 225 100 100 0 chr10 114847140 114847200 -30742088 + (TCTCTG)n Simple_repeat Simple_repeat 4 69 0 237 304 59 10 chr10 114847716 114847818 -30741470 - L2 LINE L2 -221 3051 2945 3416 96 3 31 chr10 114848047 114848620 -30740668 - L1P LINE L1 -866 5280 4724 411 153 0 0 chr10 114848620 114848686 -30740602 + L1PA10 LINE L1 6096 6167 -1 193 348 94 14 chr10 114848899 114849037 -30740251 - L2 LINE L2 -1 3312 3164 578 244 17 28 chr10 114849069 114849249 -30740039 - MER5B DNA MER1_type 0 178 1 307 263 53 64 chr10 114849414 114849574 -30739714 + MIR SINE MIR 33 196 -66 282 311 19 39 chr10 114851520 114851623 -30737665 - L2 LINE L2 0 3272 3172 23 0 0 0 chr10 114851824 114851847 -30737441 + AT_rich Low_complexity Low_complexity 1 23 0 203 327 39 29 chr10 114851913 114852017 -30737271 + MIR SINE MIR 44 148 -114 22 35 0 0 chr10 114852250 114852279 -30737009 + AT_rich Low_complexity Low_complexity 1 29 0 381 198 0 0 chr10 114852329 114852415 -30736873 + CT-rich Low_complexity Low_complexity 1 86 0 2103 167 11 0 chr10 114853263 114853616 -30735672 + MER57A LTR ERV1 1 357 -46 1254 104 2 6 chr10 114853745 114854036 -30735252 + (TTCC)n Simple_repeat Simple_repeat 4 464 0 227 294 261 28 chr10 114854403 114854583 -30734705 - L3 LINE CR1 -7 1570 1349 241 317 12 0 chr10 114854632 114854714 -30734574 + MIR SINE MIR 168 250 -12 192 204 0 0 chr10 114854728 114854772 -30734516 + L3 LINE CR1 800 843 -734 26 30 0 0 chr10 114854807 114854840 -30734448 + AT_rich Low_complexity Low_complexity 1 33 0 381 22 0 0 chr10 114855054 114855100 -30734188 + (CA)n Simple_repeat Simple_repeat 1 46 0 180 77 0 0 chr10 114855218 114855244 -30734044 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1298 218 38 9 chr10 114855253 114855597 -30733691 + L1ME1 LINE L1 3951 4304 -1842 2727 232 69 21 chr10 114855600 114856785 -30732503 + L1ME1 LINE L1 4879 6113 -53 21 36 0 0 chr10 114856825 114856853 -30732435 + AT_rich Low_complexity Low_complexity 1 28 0 180 337 153 0 chr10 114856950 114857048 -30732240 - L2 LINE L2 -5 3267 3155 369 269 60 37 chr10 114858178 114858312 -30730976 + MIR3 SINE MIR 10 146 -62 345 328 62 14 chr10 114858526 114858557 -30730731 + MER5B DNA MER1_type 17 45 -133 414 120 0 0 chr10 114858557 114858632 -30730656 + (CA)n Simple_repeat Simple_repeat 1 75 0 345 328 62 14 chr10 114858632 114858748 -30730540 + MER5B DNA MER1_type 45 175 -3 274 204 80 5 chr10 114858765 114858885 -30730403 - MER5A DNA MER1_type -3 186 1 232 284 38 149 chr10 114858885 114859145 -30730143 - L2 LINE L2 -47 3225 2995 979 182 65 13 chr10 114859186 114859477 -30729811 + MER33 DNA MER1_type 1 296 -28 203 172 103 69 chr10 114860017 114860075 -30729213 + MIR SINE MIR 76 135 -127 22 0 0 0 chr10 114860114 114860136 -30729152 + AT_rich Low_complexity Low_complexity 1 22 0 305 196 71 80 chr10 114860166 114860278 -30729010 + L3 LINE CR1 1332 1442 -135 252 239 94 8 chr10 114860435 114860552 -30728736 - MER117 DNA MER1_type -62 135 9 214 194 0 0 chr10 114860880 114860916 -30728372 - MIR SINE MIR -107 101 66 881 291 20 16 chr10 114860979 114861230 -30728058 + MIR SINE MIR 10 261 -1 221 293 81 16 chr10 114862310 114862433 -30726855 + L2 LINE L2 3161 3291 -22 518 272 107 37 chr10 114863277 114863520 -30725768 - MIR SINE MIR 0 262 3 196 286 203 30 chr10 114864512 114864645 -30724643 - L2 LINE L2 -3158 156 1 3104 106 52 20 chr10 114864667 114865165 -30724123 + L1PA15 LINE L1 5652 6165 0 1927 112 4 4 chr10 114865249 114865517 -30723771 - AluSc SINE Alu -3 306 39 263 314 29 0 chr10 114866408 114866478 -30722810 + L2 LINE L2 3234 3305 -8 403 299 22 11 chr10 114867294 114867512 -30721776 - L1MB8 LINE L1 -328 5850 5628 322 287 51 46 chr10 114867532 114867769 -30721519 - L1MB8 LINE L1 -469 5652 5415 248 375 48 68 chr10 114868791 114869084 -30720204 + L2 LINE L2 2978 3264 -8 273 357 126 15 chr10 114869380 114869649 -30719639 + L2 LINE L2 2120 2418 -896 400 220 45 68 chr10 114870081 114870213 -30719075 - L2 LINE L2 -1 3312 3184 543 229 122 54 chr10 114870268 114870473 -30718815 + MIR SINE MIR 5 223 -39 281 300 67 25 chr10 114870531 114870651 -30718637 - L2 LINE L2 -161 3152 3028 198 243 14 14 chr10 114870730 114870800 -30718488 - L2 LINE L2 -999 2315 2246 475 275 17 0 chr10 114870928 114871048 -30718240 - L2 LINE L2 -1126 2188 2067 216 279 186 0 chr10 114871056 114871142 -30718146 - L2 LINE L2 -470 2844 2743 266 286 18 9 chr10 114871852 114871964 -30717324 - HAL1b LINE L1 -567 781 669 23 33 0 0 chr10 114872257 114872287 -30717001 + AT_rich Low_complexity Low_complexity 1 30 0 357 282 28 83 chr10 114872302 114872483 -30716805 - HAL1b LINE L1 -1023 325 155 218 306 97 21 chr10 114873412 114873556 -30715732 + L2 LINE L2 2743 2897 -417 * 353 348 170 27 chr10 114873534 114873910 -30715378 + L2 LINE L2 2842 3271 -1 463 265 56 71 chr10 114877574 114877794 -30711494 + MIR SINE MIR 8 217 -45 4340 121 2 0 chr10 114878893 114879523 -30709765 + L1PA15 LINE L1 5533 6163 -2 435 303 37 66 chr10 114879555 114879796 -30709492 + LTR16C LTR ERVL 249 482 -9 438 357 54 59 chr10 114879894 114880544 -30708744 + L2 LINE L2 1517 2169 -1145 2453 102 10 34 chr10 114880544 114880928 -30708360 + THE1C LTR MaLR 1 375 0 10161 126 30 6 chr10 114880928 114882470 -30706818 + THE1C-int LTR MaLR 1 1580 0 2220 133 16 42 chr10 114882470 114882855 -30706433 + THE1C LTR MaLR 1 375 0 438 357 54 59 chr10 114882855 114882927 -30706361 + L2 LINE L2 2166 2237 -1077 258 284 0 0 chr10 114883255 114883329 -30705959 + MER117 DNA MER1_type 1 74 -123 21 0 0 0 chr10 114883760 114883781 -30705507 + AT_rich Low_complexity Low_complexity 1 21 0 354 313 48 27 chr10 114883782 114883929 -30705359 - MIR SINE MIR -74 188 39 186 43 0 0 chr10 114884987 114885010 -30704278 + (TTCA)n Simple_repeat Simple_repeat 3 25 0 277 355 27 0 chr10 114885021 114885131 -30704157 - L2 LINE L2 -22 3291 3179 402 336 25 0 chr10 114885382 114885504 -30703784 + MIR3 SINE MIR 35 159 -49 255 343 40 40 chr10 114886024 114886225 -30703063 - L2 LINE L2 -36 3277 3077 240 323 40 40 chr10 114886249 114886373 -30702915 - L2 LINE L2 -2 3270 3147 444 325 153 0 chr10 114887766 114887969 -30701319 - MIR SINE MIR 0 262 29 270 0 0 0 chr10 114888148 114888178 -30701110 + (CA)n Simple_repeat Simple_repeat 1 30 0 312 261 8 108 chr10 114889117 114889247 -30700041 + MIR SINE MIR 32 148 -114 394 340 108 9 chr10 114889848 114890080 -30699208 + MIR SINE MIR 7 261 -1 183 353 173 0 chr10 114890488 114890638 -30698650 + MIR SINE MIR 52 227 -35 187 273 71 91 chr10 114891338 114891492 -30697796 - MIR SINE MIR -64 198 48 336 143 0 0 chr10 114891770 114891826 -30697462 + (T)n Simple_repeat Simple_repeat 1 56 0 243 0 0 0 chr10 114892131 114892158 -30697130 + (CA)n Simple_repeat Simple_repeat 2 28 0 572 269 67 29 chr10 114892525 114892763 -30696525 - MIR SINE MIR -10 252 6 2697 120 52 2 chr10 114894052 114894460 -30694828 - MSTA LTR MaLR 0 428 1 359 320 20 10 chr10 114894568 114894668 -30694620 + MIR SINE MIR 37 137 -125 317 337 10 0 chr10 114895931 114896032 -30693256 + MIR SINE MIR 36 137 -125 1664 162 7 58 chr10 114896127 114896436 -30692852 + AluJo SINE Alu 1 293 -19 234 238 140 38 chr10 114896626 114896799 -30692489 + MIR SINE MIR 20 262 0 748 228 46 115 chr10 114896863 114897210 -30692078 - MLT1A2 LTR MaLR -51 323 1 3557 231 35 36 chr10 114897222 114898588 -30690700 - MLT1A1-int LTR MaLR -15 1356 1 1217 216 66 63 chr10 114898588 114898950 -30690338 - MLT1A1 LTR MaLR 0 365 3 732 162 47 20 chr10 114899822 114899970 -30689318 + L1MB5 LINE L1 6023 6174 0 1175 183 28 0 chr10 114900098 114900278 -30689010 + MER5A DNA MER1_type 5 189 0 188 329 24 24 chr10 114901187 114901269 -30688019 - MIR SINE MIR -93 115 34 287 256 13 0 chr10 114902774 114902852 -30686436 + (TTCA)n Simple_repeat Simple_repeat 1 79 0 328 394 56 31 chr10 114902861 114903148 -30686140 - L2 LINE L2 -49 3223 2930 234 247 161 0 chr10 114904328 114904409 -30684879 + MIR SINE MIR 100 193 -69 1884 198 143 65 chr10 114904712 114905298 -30683990 + MER92B LTR ERV1 5 636 0 460 298 201 45 chr10 114905415 114905972 -30683316 + L2 LINE L2 1724 2367 -947 423 369 47 0 chr10 114906025 114906174 -30683114 - L2 LINE L2 0 3272 3117 214 369 0 10 chr10 114906347 114906450 -30682838 + L2 LINE L2 2578 2679 -635 248 239 221 44 chr10 114906796 114906909 -30682379 + L2 LINE L2 3180 3312 -1 359 277 17 25 chr10 114907423 114907542 -30681746 + MER5A DNA MER1_type 2 119 -70 33 0 0 0 chr10 114908828 114908861 -30680427 + AT_rich Low_complexity Low_complexity 1 33 0 647 316 0 0 chr10 114909131 114909321 -30679967 + MIR SINE MIR 34 223 -39 262 360 80 0 chr10 114909327 114909427 -30679861 - MIR3 SINE MIR -52 156 49 495 286 141 19 chr10 114910320 114910526 -30678762 + MIR SINE MIR 12 242 -20 1957 149 69 33 chr10 114911309 114911671 -30677617 + THE1C LTR MaLR 1 375 0 1507 199 23 28 chr10 114914709 114915102 -30674186 - Charlie5 DNA MER1_type 0 2624 2234 499 198 99 0 chr10 114915110 114915221 -30674067 - MER3 DNA MER1_type -87 122 48 202 329 14 0 chr10 114915272 114915342 -30673946 - MIR SINE MIR -116 146 76 2518 222 76 25 chr10 114915418 114916077 -30673211 - L1ME1 LINE L1 -3 6163 5539 185 0 40 0 chr10 114916077 114916102 -30673186 + (GA)n Simple_repeat Simple_repeat 2 27 0 * 342 45 0 0 chr10 114916101 114916145 -30673143 + (TG)n Simple_repeat Simple_repeat 2 45 0 2518 222 76 25 chr10 114916102 114916211 -30673077 - L1ME1 LINE L1 -627 5539 5401 2148 128 0 3 chr10 114916255 114916559 -30672729 + AluSg SINE Alu 1 303 -7 413 197 27 25 chr10 114917157 114917324 -30671964 - MER112 DNA MER1_type -123 137 1 254 281 12 12 chr10 114919055 114919137 -30670151 - MIR SINE MIR -84 124 43 241 410 10 0 chr10 114920425 114920525 -30668763 - L2 LINE L2 -3 3310 3210 180 111 0 0 chr10 114920774 114920801 -30668487 + (TAAA)n Simple_repeat Simple_repeat 4 30 0 392 249 42 85 chr10 114922701 114922811 -30666477 + MIR SINE MIR 104 206 -56 2119 136 0 0 chr10 114922811 114923119 -30666169 + AluSx SINE Alu 1 308 -4 392 249 42 85 chr10 114923119 114923173 -30666115 + MIR SINE MIR 206 261 -1 306 258 39 70 chr10 114923271 114923399 -30665889 + MIR SINE MIR 27 150 -58 26 0 0 0 chr10 114924620 114924646 -30664642 + AT_rich Low_complexity Low_complexity 1 26 0 327 243 69 98 chr10 114925262 114925435 -30663853 - MER117 DNA MER1_type 0 197 30 235 242 30 0 chr10 114925930 114925996 -30663292 - L2 LINE L2 0 3313 3246 429 103 0 0 chr10 114926320 114926388 -30662900 + (CA)n Simple_repeat Simple_repeat 2 69 0 217 291 25 13 chr10 114927073 114927152 -30662136 - L2 LINE L2 0 3313 3234 844 154 166 6 chr10 114927406 114927581 -30661707 + MER3 DNA MER1_type 1 203 -6 208 418 5 74 chr10 114927640 114927829 -30661459 - L2 LINE L2 -92 3180 3005 201 309 0 0 chr10 114927913 114927968 -30661320 + (CACCAT)n Simple_repeat Simple_repeat 5 59 0 189 121 0 0 chr10 114929019 114929052 -30660236 + (TGGA)n Simple_repeat Simple_repeat 4 36 0 267 271 14 0 chr10 114929056 114929126 -30660162 + (TGAA)n Simple_repeat Simple_repeat 1 71 0 327 261 14 72 chr10 114929517 114929655 -30659633 + MIR SINE MIR 82 211 -51 210 118 0 0 chr10 114929686 114929720 -30659568 + (TTG)n Simple_repeat Simple_repeat 2 35 0 721 334 91 46 chr10 114930116 114930742 -30658546 - L2 LINE L2 -907 2407 1754 216 158 0 0 chr10 114930789 114930827 -30658461 + (ATG)n Simple_repeat Simple_repeat 3 40 0 413 182 26 0 chr10 114931191 114931268 -30658020 - MER116 DNA Mariner 0 80 2 519 261 82 10 chr10 114931475 114931670 -30657618 - MIR SINE MIR 0 262 54 315 383 42 46 chr10 114934319 114934604 -30654684 - L3 LINE CR1 -5 1572 1289 197 346 13 0 chr10 114934748 114934826 -30654462 - L2 LINE L2 -1 3271 3193 218 294 71 32 chr10 114935481 114935607 -30653681 + L2 LINE L2 2227 2357 -957 1297 120 0 0 chr10 114935622 114935806 -30653482 + AluSc SINE Alu 125 308 -1 616 335 82 34 chr10 114935885 114936635 -30652653 + L2 LINE L2 2461 3305 -8 207 0 0 0 chr10 114936903 114936926 -30652362 + (TAA)n Simple_repeat Simple_repeat 2 24 0 1958 125 22 42 chr10 114937508 114937820 -30651468 - AluSq SINE Alu -7 306 1 206 269 13 13 chr10 114938408 114938486 -30650802 + GA-rich Low_complexity Low_complexity 1 78 0 1714 156 3 42 chr10 114938729 114939037 -30650251 + AluJo SINE Alu 1 296 -16 1874 143 0 4 chr10 114939040 114939339 -30649949 + AluSc SINE Alu 1 298 0 233 276 26 0 chr10 114939384 114939460 -30649828 + (TA)n Simple_repeat Simple_repeat 1 78 0 264 229 0 72 chr10 114940745 114940828 -30648460 + MIR SINE MIR 110 186 -76 240 59 0 0 chr10 114941067 114941101 -30648187 + (CA)n Simple_repeat Simple_repeat 2 35 0 360 302 35 9 chr10 114942787 114942903 -30646385 + L2 LINE L2 3195 3313 0 362 317 74 53 chr10 114943018 114943261 -30646027 + L2 LINE L2 2682 2929 -385 198 0 0 0 chr10 114944698 114944720 -30644568 + (T)n Simple_repeat Simple_repeat 1 22 0 294 267 60 43 chr10 114944720 114944836 -30644452 - MIR SINE MIR -32 230 113 1851 152 0 30 chr10 114945170 114945472 -30643816 - AluJb SINE Alu -19 293 1 270 309 47 47 chr10 114946347 114946509 -30642779 + MIR SINE MIR 6 168 -40 1602 180 45 30 chr10 114946597 114946930 -30642358 - MER58B DNA MER1_type 0 341 4 2721 175 18 16 chr10 114947101 114947604 -30641684 - L1MA10 LINE L1 0 6334 5831 21 0 0 0 chr10 114947617 114947638 -30641650 + AT_rich Low_complexity Low_complexity 1 21 0 346 232 72 40 chr10 114947797 114947922 -30641366 + Charlie8 DNA MER1_type 151 279 -2138 550 320 52 3 chr10 114948367 114948633 -30640655 - L1ME3 LINE L1 -260 5902 5616 226 339 62 27 chr10 114948765 114948877 -30640411 + L2 LINE L2 3155 3270 -2 2457 86 0 3 chr10 114949070 114949372 -30639916 + AluSq SINE Alu 3 303 -10 317 256 48 72 chr10 114950215 114950340 -30638948 - L2 LINE L2 0 3313 3192 210 105 0 0 chr10 114950447 114950485 -30638803 + (TGG)n Simple_repeat Simple_repeat 1 38 0 333 233 300 20 chr10 114952143 114952293 -30636995 + MIR3 SINE MIR 12 203 -5 535 241 0 28 chr10 114952684 114952804 -30636484 + MIR SINE MIR 45 162 -46 2036 102 25 18 chr10 114952849 114953169 -30636119 - AluSg SINE Alu 0 322 1 23 54 0 0 chr10 114953339 114953376 -30635912 + AT_rich Low_complexity Low_complexity 1 37 0 251 186 0 0 chr10 114953409 114953452 -30635836 - MIR SINE MIR -101 161 119 1768 130 3 33 chr10 114954058 114954357 -30634931 - MER1B DNA MER1_type 0 339 50 286 182 0 0 chr10 114954532 114954587 -30634701 + LTR48 LTR ERV1 650 704 -83 329 253 24 0 chr10 114954755 114954838 -30634450 - L2 LINE L2 -248 3024 2940 355 270 7 80 chr10 114956134 114956271 -30633017 - MIR3 SINE MIR -75 133 7 721 198 93 0 chr10 114957269 114957441 -30631847 + MER5A DNA MER1_type 2 189 0 2157 125 3 7 chr10 114958789 114959092 -30630196 + AluSp SINE Alu 1 302 -11 1031 217 179 24 chr10 114959276 114959690 -30629598 - MLT1D LTR MaLR 0 505 28 1347 311 85 49 chr10 114959926 114960681 -30628607 - L3 LINE CR1 -462 1115 334 182 258 0 48 chr10 114960761 114960823 -30628465 - L2 LINE L2 -217 3055 2997 209 71 0 0 chr10 114962024 114962052 -30627236 - MIR SINE MIR -65 143 116 345 351 12 30 chr10 114962082 114962250 -30627038 + L1ME4a LINE L1 5954 6118 -3 846 331 113 36 chr10 114964175 114965188 -30624100 + L2 LINE L2 2205 3306 -7 365 320 47 7 chr10 114966090 114966240 -30623048 + MIR SINE MIR 46 201 -61 397 277 39 8 chr10 114966390 114966520 -30622768 - MARNA DNA Mariner -57 529 396 202 365 62 14 chr10 114966621 114966766 -30622522 - MIR SINE MIR -90 172 21 21 57 0 0 chr10 114967002 114967037 -30622251 + AT_rich Low_complexity Low_complexity 1 35 0 186 139 0 28 chr10 114968187 114968223 -30621065 - L2 LINE L2 -6 3266 3232 * 369 272 56 37 chr10 114968202 114968364 -30620924 - MIR SINE MIR -14 248 84 303 219 68 0 chr10 114968819 114968892 -30620396 - MER3 DNA MER1_type -131 78 1 303 310 71 32 chr10 114969577 114969732 -30619556 + MIR3 SINE MIR 30 190 -18 288 0 0 0 chr10 114969740 114969772 -30619516 + (TTA)n Simple_repeat Simple_repeat 2 33 0 2180 132 3 0 chr10 114970527 114970837 -30618451 + AluSx SINE Alu 1 311 -1 1197 194 57 107 chr10 114970846 114971305 -30617983 + MER63B DNA MER1_type 1 436 0 2283 97 3 7 chr10 114971611 114971910 -30617378 - AluSq SINE Alu -15 298 1 218 282 38 92 chr10 114971935 114972066 -30617222 - L2 LINE L2 0 3313 3190 25 31 0 0 chr10 114972464 114972496 -30616792 + AT_rich Low_complexity Low_complexity 1 32 0 357 252 197 27 chr10 114974336 114974483 -30614805 - MER5A DNA MER1_type 0 189 18 646 143 34 0 chr10 114975360 114975507 -30613781 - Charlie5 DNA MER1_type 0 2624 2473 265 146 109 18 chr10 114975508 114975563 -30613725 - Charlie5 DNA MER1_type -2542 70 11 333 174 0 0 chr10 114975917 114975986 -30613302 + (ATGGTG)n Simple_repeat Simple_repeat 1 69 0 229 333 54 9 chr10 114978711 114978822 -30610466 + MIR SINE MIR 129 244 -18 289 312 162 0 chr10 114978840 114978994 -30610294 + MIR SINE MIR 5 183 -79 440 280 76 0 chr10 114980835 114980953 -30608335 - L2 LINE L2 -4 3268 3142 2195 80 3 7 chr10 114981202 114981491 -30607797 + AluSc SINE Alu 1 288 -21 2538 182 68 4 chr10 114981562 114982090 -30607198 - MER68 LTR ERV1 0 562 1 968 75 0 8 chr10 114983551 114983684 -30605604 - L1MA1 LINE L1 0 6302 6171 311 289 10 10 chr10 114984356 114984453 -30604835 + GA-rich Low_complexity Low_complexity 4 100 0 2386 96 3 6 chr10 114984512 114984825 -30604463 - AluSq SINE Alu -1 312 1 216 328 188 8 chr10 114986010 114986138 -30603150 + MIR SINE MIR 57 207 -55 11276 199 18 55 chr10 114986393 114990455 -30598833 - L1MC1 LINE L1 -11 7024 3366 492 18 0 0 chr10 114990455 114990512 -30598776 + (TG)n Simple_repeat Simple_repeat 2 58 0 11276 199 18 55 chr10 114990512 114993753 -30595535 - L1MC1 LINE L1 -3669 3366 4 5536 237 29 30 chr10 114993753 114995559 -30593729 - L1MCa LINE L1 -1763 4663 2861 5001 185 61 29 chr10 114995593 114995878 -30593410 - L1MCa LINE L1 -4191 2235 1961 4276 56 4 6 chr10 114995878 114996417 -30592871 - L1PA7 LINE L1 0 6154 5617 5001 185 61 29 chr10 114996417 114997906 -30591382 - L1MCa LINE L1 -4465 1961 313 315 0 0 0 chr10 114997906 114997941 -30591347 + (TG)n Simple_repeat Simple_repeat 2 36 0 421 298 60 71 chr10 114998186 114998438 -30590850 + MIR SINE MIR 2 250 -12 313 276 66 46 chr10 114998629 114998781 -30590507 - MIR3 SINE MIR -43 165 11 182 206 15 0 chr10 114999364 114999432 -30589856 + (TCTA)n Simple_repeat Simple_repeat 2 70 0 382 313 71 43 chr10 114999651 114999862 -30589426 + MIR SINE MIR 2 218 -44 300 253 68 91 chr10 115003136 115003357 -30585931 - L1ME2 LINE L1 -12 6152 5937 243 79 0 0 chr10 115003418 115003456 -30585832 + (TA)n Simple_repeat Simple_repeat 2 39 0 439 288 52 7 chr10 115003479 115003632 -30585656 - L1ME2 LINE L1 -402 5762 5603 5449 152 101 8 chr10 115003640 115004573 -30584715 - LTR28 LTR ERV1 0 1020 1 266 78 22 22 chr10 115004575 115004626 -30584662 + L1MC/D LINE L1 5563 5613 -720 248 293 57 0 chr10 115004597 115004703 -30584585 - L1ME2 LINE L1 -584 5600 5489 * 957 129 0 0 chr10 115004707 115004924 -30584364 + (TA)n Simple_repeat Simple_repeat 1 217 0 1589 169 15 40 chr10 115005031 115005414 -30583874 - MER1B DNA MER1_type 0 339 1 337 264 32 12 chr10 115007185 115007290 -30581998 + MIR SINE MIR 31 137 -71 22 0 0 0 chr10 115007300 115007322 -30581966 + AT_rich Low_complexity Low_complexity 1 22 0 1727 167 3 3 chr10 115007325 115007612 -30581676 + AluJo SINE Alu 1 287 -25 27 0 0 0 chr10 115007615 115007642 -30581646 + AT_rich Low_complexity Low_complexity 1 27 0 708 12 0 0 chr10 115008609 115008690 -30580598 + (TTTTC)n Simple_repeat Simple_repeat 5 85 0 1481 221 62 55 chr10 115009075 115009530 -30579758 - MLT1C LTR MaLR 0 467 1 228 313 68 96 chr10 115011003 115011213 -30578075 + MIR3 SINE MIR 2 200 -62 242 164 16 49 chr10 115011323 115011384 -30577904 + LTR16A1 LTR ERVL 47 105 -352 433 282 58 34 chr10 115011436 115011576 -30577712 + LTR16A1 LTR ERVL 247 395 -62 2211 114 3 10 chr10 115011576 115011884 -30577404 + AluSq SINE Alu 1 306 -7 433 282 58 34 chr10 115011884 115011949 -30577339 + LTR16A1 LTR ERVL 395 457 0 739 202 15 12 chr10 115012728 115013041 -30576247 + CT-rich Low_complexity Low_complexity 1 313 0 1046 178 0 6 chr10 115013476 115013656 -30575632 + AluJb SINE Alu 119 297 -15 922 25 25 0 chr10 115015577 115015697 -30573591 + (TTTC)n Simple_repeat Simple_repeat 2 124 0 484 262 110 26 chr10 115015879 115016070 -30573218 + MER63A DNA MER1_type 3 209 -1 198 266 7 147 chr10 115016185 115016241 -30573047 + L2 LINE L2 3189 3215 -98 2257 117 0 0 chr10 115016241 115016549 -30572739 - AluSx SINE Alu -4 308 1 198 266 7 147 chr10 115016549 115016635 -30572653 + L2 LINE L2 3215 3311 -2 1307 142 5 14 chr10 115016793 115017011 -30572277 - AluSg/x SINE Alu -1 309 94 2727 246 20 38 chr10 115018637 115019640 -30569648 - L1ME1 LINE L1 -5 6161 5180 241 158 0 0 chr10 115019649 115019687 -30569601 - L1ME1 LINE L1 -1038 5108 5071 1482 207 121 25 chr10 115019717 115019768 -30569520 - L1ME1 LINE L1 -1200 4946 4901 2302 112 7 0 chr10 115019768 115020073 -30569215 - AluSx SINE Alu -3 309 3 1482 207 121 25 chr10 115020073 115020576 -30568712 - L1ME1 LINE L1 -1245 4901 4339 606 332 26 10 chr10 115020663 115020967 -30568321 - L1MEc LINE L1 -6056 340 32 321 321 72 10 chr10 115020967 115021160 -30568128 - L1MC/D LINE L1 -2030 5778 5574 288 238 103 40 chr10 115021249 115021375 -30567913 + L1MC/D LINE L1 5334 5467 -2341 1538 108 14 0 chr10 115022053 115022267 -30567021 - L1PA13 LINE L1 -5 6158 5942 206 167 0 21 chr10 115022343 115022391 -30566897 + (TTAA)n Simple_repeat Simple_repeat 4 50 0 481 295 94 49 chr10 115022851 115023075 -30566213 + MIR SINE MIR 1 234 -28 29 0 0 0 chr10 115023713 115023742 -30565546 + AT_rich Low_complexity Low_complexity 1 29 0 574 255 20 89 chr10 115023743 115023990 -30565298 - MER8 DNA MER2_type -1 238 9 2115 123 10 3 chr10 115024233 115024534 -30564754 + AluSx SINE Alu 1 303 -9 180 0 0 0 chr10 115024870 115024890 -30564398 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 195 42 0 0 chr10 115025756 115025780 -30563508 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 469 161 0 21 chr10 115025864 115025957 -30563331 - L1PA7 LINE L1 -2 6152 6062 331 307 18 0 chr10 115026110 115026224 -30563064 - L1ME3A LINE L1 -8 6162 6047 1989 155 13 0 chr10 115026917 115027221 -30562067 + AluSx SINE Alu 1 308 -4 185 267 133 0 chr10 115027697 115027787 -30561501 + L2 LINE L2 3203 3304 -9 2091 71 4 15 chr10 115027912 115028179 -30561109 + AluSc SINE Alu 35 298 -11 254 360 147 36 chr10 115028187 115028800 -30560488 - L2 LINE L2 -403 2911 2231 1864 141 19 22 chr10 115029047 115029360 -30559928 + AluSx SINE Alu 1 312 0 2397 153 8 11 chr10 115029391 115029757 -30559531 - MLT1A1 LTR MaLR 0 365 1 2151 119 76 17 chr10 115030527 115030881 -30558407 - THE1C LTR MaLR 0 375 1 447 282 116 61 chr10 115031400 115031762 -30557526 - L1ME3A LINE L1 -255 5866 5485 246 81 0 0 chr10 115032650 115032687 -30556601 + (GA)n Simple_repeat Simple_repeat 2 38 0 1055 195 14 65 chr10 115033940 115034058 -30555230 + MER8 DNA MER2_type 2 106 -133 1508 115 0 0 chr10 115034058 115034258 -30555030 + AluSc SINE Alu 93 292 -17 1055 195 14 65 chr10 115034258 115034354 -30554934 + MER8 DNA MER2_type 106 205 -34 2548 39 7 3 chr10 115034354 115034659 -30554629 + AluY SINE Alu 1 306 -5 1928 31 0 0 chr10 115034684 115034907 -30554381 + L1PA4 LINE L1 5907 6129 -26 209 32 0 32 chr10 115034911 115034942 -30554346 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 201 171 0 24 chr10 115035515 115035556 -30553732 + (TTTG)n Simple_repeat Simple_repeat 4 43 0 431 310 134 16 chr10 115037041 115037228 -30552060 + MIR SINE MIR 9 217 -45 407 228 18 8 chr10 115038568 115038734 -30550554 + MER3 DNA MER1_type 6 209 0 305 173 0 0 chr10 115038839 115038891 -30550397 - L2 LINE L2 0 3272 3221 396 319 22 7 chr10 115040453 115040588 -30548700 - L2 LINE L2 0 3272 3136 462 262 140 37 chr10 115040835 115040999 -30548289 + MER5A DNA MER1_type 9 189 0 222 301 53 9 chr10 115041155 115041268 -30548020 - MIR SINE MIR -23 239 122 312 214 118 160 chr10 115042079 115042341 -30546947 + MIR SINE MIR 12 262 0 324 253 38 25 chr10 115042484 115042563 -30546725 - L2 LINE L2 -40 3273 3194 492 290 77 39 chr10 115044701 115044960 -30544328 - MLT1H LTR MaLR -182 367 99 185 244 49 0 chr10 115046197 115046238 -30543050 + MER5A DNA MER1_type 147 189 0 188 238 63 0 chr10 115046658 115046721 -30542567 - MIR SINE MIR -92 116 50 227 329 35 0 chr10 115047481 115047566 -30541722 + MIR SINE MIR 120 207 -55 368 195 0 49 chr10 115049594 115049676 -30539612 - L2 LINE L2 0 3313 3236 365 306 9 0 chr10 115049702 115049810 -30539478 + MER94 DNA DNA 25 133 -1 464 202 30 10 chr10 115050072 115050171 -30539117 - LTR67 LTR ERVL 0 557 457 283 211 0 18 chr10 115050405 115050462 -30538826 + MLT1B LTR MaLR 1 56 -334 1019 300 86 32 chr10 115051503 115052003 -30537285 + MLT1H1 LTR MaLR 5 531 -24 638 229 40 4 chr10 115053642 115053869 -30535419 - L1MA7 LINE L1 -1 6290 6056 11265 181 34 86 chr10 115053876 115055907 -30533381 + L1M2 LINE L1 724 2860 -4706 1713 155 9 16 chr10 115055907 115056230 -30533058 - L1PB1 LINE L1 -3 6148 5828 11265 181 34 86 chr10 115056230 115056430 -30532858 + L1M2 LINE L1 2860 3069 -4497 7300 42 5 1 chr10 115056430 115058123 -30531165 - L1PA5 LINE L1 -2 6152 4457 11265 181 34 86 chr10 115058123 115058842 -30530446 + L1M2 LINE L1 3069 3520 -4046 398 114 45 0 chr10 115058845 115058933 -30530355 + GA-rich Low_complexity Low_complexity 2 93 0 10268 194 28 20 chr10 115058936 115060487 -30528801 + L1M2 LINE L1 3461 5042 -2523 2263 128 19 25 chr10 115060487 115060853 -30528435 - THE1B LTR MaLR 0 364 1 10268 194 28 20 chr10 115060853 115061998 -30527290 + L1M2 LINE L1 5042 6176 -1389 595 277 86 51 chr10 115061991 115062561 -30526727 - L1M1 LINE L1 -4121 3444 2855 * 292 355 77 7 chr10 115062715 115062870 -30526418 + MIR3 SINE MIR 43 208 0 397 246 254 7 chr10 115063335 115063473 -30525815 + MER5A DNA MER1_type 9 180 -9 1864 161 15 0 chr10 115063663 115063999 -30525289 - L1PA16 LINE L1 0 6166 5826 670 312 218 34 chr10 115064958 115065609 -30523679 + L2 LINE L2 62 832 -2482 1021 323 86 30 chr10 115065618 115066359 -30522929 + L2 LINE L2 1604 2386 -928 429 207 103 46 chr10 115066393 115066618 -30522670 - MER106B DNA MER1_type 0 1059 3 478 334 140 31 chr10 115066649 115067071 -30522217 + L2 LINE L2 2462 2929 -385 2007 134 0 0 chr10 115067290 115067607 -30521681 - AluSq SINE Alu 0 317 1 294 292 0 62 chr10 115067633 115067729 -30521559 + L2 LINE L2 3179 3268 -4 400 182 112 49 chr10 115067864 115068007 -30521281 - L1M4 LINE L1 -2922 3224 3073 629 322 91 14 chr10 115068065 115068494 -30520794 + LTR33A LTR ERVL 62 523 0 366 217 11 22 chr10 115068857 115068949 -30520339 - MER5A DNA MER1_type -90 99 9 1820 142 4 0 chr10 115069025 115069299 -30519989 - AluSx SINE Alu -13 299 25 2045 122 135 23 chr10 115069655 115070040 -30519248 + MSTA LTR MaLR 1 428 0 318 330 28 0 chr10 115070086 115070192 -30519096 - MIR SINE MIR -73 189 81 423 307 92 36 chr10 115070750 115071001 -30518287 - L2 LINE L2 0 3313 3049 357 340 26 52 chr10 115071055 115071323 -30517965 - MIR SINE MIR 0 262 2 747 301 51 94 chr10 115071362 115071990 -30517298 + L3 LINE CR1 456 1056 -521 1141 207 20 128 chr10 115072010 115072146 -30517142 + MLT1A1 LTR MaLR 3 152 -213 7925 11 0 0 chr10 115072146 115073067 -30516221 + L1PA2 LINE L1 5231 6151 -4 1141 207 20 128 chr10 115073067 115073335 -30515953 + MLT1A1 LTR MaLR 152 363 -2 225 286 56 112 chr10 115073335 115073531 -30515757 + L3 LINE CR1 1068 1252 -325 304 297 11 11 chr10 115073626 115073717 -30515571 - MIR SINE MIR -93 169 79 306 321 189 20 chr10 115073849 115074045 -30515243 - MIR SINE MIR -26 236 8 292 330 21 0 chr10 115075546 115075643 -30513645 - MIR3 SINE MIR -1 207 109 180 340 0 0 chr10 115076604 115076651 -30512637 - L2 LINE L2 -16 3256 3210 553 290 93 29 chr10 115076797 115077107 -30512181 - LTR33 LTR ERVL -173 348 19 330 294 11 0 chr10 115077111 115077203 -30512085 + MIR SINE MIR 156 248 -14 2565 33 0 3 chr10 115127487 115127794 -30461494 + L1PA3 LINE L1 5845 6150 -5 23 54 0 0 chr10 115127970 115128007 -30461281 + AT_rich Low_complexity Low_complexity 1 37 0 7102 178 66 24 chr10 115128231 115128989 -30460299 + L1MCa LINE L1 20 745 -5681 221 0 35 0 chr10 115128989 115129018 -30460270 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 7102 178 66 24 chr10 115129018 115129384 -30459904 + L1MCa LINE L1 745 1094 -5332 345 47 0 0 chr10 115129384 115129427 -30459861 + (CAA)n Simple_repeat Simple_repeat 2 44 0 7102 178 66 24 chr10 115129427 115129944 -30459344 + L1MCa LINE L1 1094 1824 -4602 2572 171 21 32 chr10 115129944 115130712 -30458576 + L1MA7 LINE L1 5021 5779 -512 201 39 0 0 chr10 115130712 115130738 -30458550 + (TA)n Simple_repeat Simple_repeat 1 26 0 2030 143 140 8 chr10 115130746 115131117 -30458171 + MSTA LTR MaLR 9 428 0 1851 161 18 47 chr10 115131155 115131511 -30457777 + L1MA7 LINE L1 5783 6129 -162 2121 129 45 25 chr10 115131511 115131868 -30457420 + THE1B LTR MaLR 1 364 0 1851 161 18 47 chr10 115131868 115131897 -30457391 + L1MA7 LINE L1 6129 6157 -134 864 122 94 6 chr10 115131894 115132074 -30457214 + L1MCa LINE L1 1848 2043 -4383 * 1444 143 39 0 chr10 115132079 115132309 -30456979 - Tigger3(Golem) DNA MER2_type -1 3028 2790 4737 159 63 9 chr10 115132319 115133213 -30456075 + L1MC1 LINE L1 5378 6319 -14 42 36 0 0 chr10 115133254 115133310 -30455978 + AT_rich Low_complexity Low_complexity 1 56 0 24 32 0 0 chr10 115133335 115133366 -30455922 + AT_rich Low_complexity Low_complexity 1 31 0 4296 134 11 16 chr10 115134289 115134991 -30454297 - L1PA16 LINE L1 -9 6157 5459 4661 190 29 21 chr10 115134991 115136144 -30453144 + L1P LINE L1 4268 5428 -738 1897 105 4 15 chr10 115136145 115136412 -30452876 - AluSp SINE Alu 0 313 50 219 319 21 11 chr10 115138169 115138263 -30451025 + MIR3 SINE MIR 76 170 -38 31 0 0 0 chr10 115138656 115138687 -30450601 + AT_rich Low_complexity Low_complexity 1 31 0 309 26 0 0 chr10 115138730 115138768 -30450520 + (CA)n Simple_repeat Simple_repeat 1 38 0 2190 129 0 0 chr10 115139290 115139600 -30449688 - AluSx SINE Alu -2 310 1 236 284 60 0 chr10 115140425 115140492 -30448796 + MER5A DNA MER1_type 42 112 -77 256 203 0 58 chr10 115140575 115140644 -30448644 - L2 LINE L2 -83 3230 3166 519 290 40 96 chr10 115140664 115140936 -30448352 - MIR SINE MIR -4 258 2 22 56 0 0 chr10 115142202 115142238 -30447050 + AT_rich Low_complexity Low_complexity 1 36 0 203 209 47 0 chr10 115142642 115142685 -30446603 - L3 LINE CR1 -3 1574 1530 214 254 68 0 chr10 115142754 115142813 -30446475 + L2 LINE L2 3209 3271 -1 273 210 0 0 chr10 115143149 115143211 -30446077 + (TG)n Simple_repeat Simple_repeat 2 63 0 1217 182 27 16 chr10 115143279 115143537 -30445751 - L1MB1 LINE L1 -1 6167 5907 576 154 0 0 chr10 115145451 115145555 -30443733 + GA-rich Low_complexity Low_complexity 3 106 0 874 227 23 9 chr10 115145742 115145958 -30443330 + Charlie1 DNA MER1_type 2343 2561 -200 2308 135 23 3 chr10 115146557 115146905 -30442383 + THE1B LTR MaLR 10 364 0 341 350 56 77 chr10 115147394 115147731 -30441557 + L2 LINE L2 2943 3272 0 2021 132 0 7 chr10 115148410 115148713 -30440575 - AluSg SINE Alu -9 301 1 323 280 100 0 chr10 115149018 115149118 -30440170 - L2 LINE L2 0 3313 3204 246 381 47 34 chr10 115149521 115149757 -30439531 - MIR SINE MIR 0 262 24 311 78 78 0 chr10 115150129 115150180 -30439108 - MLT2A2 LTR ERVL 0 453 399 366 39 20 0 chr10 115150403 115150454 -30438834 - MLT2A2 LTR ERVL -399 54 3 20810 71 13 7 chr10 115150456 115153150 -30436138 - HERVL-A2 LTR ERVL 0 5654 2946 14101 196 19 34 chr10 115153146 115155371 -30433917 - HERVL-A2 LTR ERVL -3013 2751 575 * 1686 77 165 0 chr10 115155371 115155631 -30433657 - AluSp SINE Alu 0 303 1 14101 196 19 34 chr10 115155631 115156197 -30433091 - HERVL-A2 LTR ERVL -5189 575 2 341 80 40 0 chr10 115156198 115156248 -30433040 - MLT2A2 LTR ERVL 0 453 402 1421 250 117 30 chr10 115156324 115157225 -30432063 - L1M4 LINE L1 -1437 4709 3731 1224 255 182 43 chr10 115157875 115158475 -30430813 + LTR50 LTR ERVL 1 713 -82 2243 123 0 0 chr10 115158475 115158783 -30430505 - AluSg SINE Alu -2 308 1 1224 255 182 43 chr10 115158783 115158880 -30430408 + LTR50 LTR ERVL 713 795 0 2251 82 0 0 chr10 115160020 115160324 -30428964 - AluSg SINE Alu 0 304 1 1361 171 87 47 chr10 115160364 115160662 -30428626 - AluJb SINE Alu 0 312 3 23 0 0 0 chr10 115160817 115160840 -30428448 + AT_rich Low_complexity Low_complexity 1 23 0 54 62 0 0 chr10 115161456 115161552 -30427736 + AT_rich Low_complexity Low_complexity 1 96 0 23 33 0 0 chr10 115161749 115161779 -30427509 + AT_rich Low_complexity Low_complexity 1 30 0 446 394 41 0 chr10 115162319 115162489 -30426799 + MER91A DNA MER1_type 19 195 -1 186 43 0 0 chr10 115163318 115163341 -30425947 + (GA)n Simple_repeat Simple_repeat 2 24 0 587 181 139 0 chr10 115164476 115164620 -30424668 + MER96B DNA MER1_type? 254 417 0 874 254 83 32 chr10 115164820 115165254 -30424034 - L1MEc LINE L1 -4920 1476 1021 295 328 30 99 chr10 115165268 115165432 -30423856 + L2 LINE L2 2847 2992 -321 534 232 18 0 chr10 115165432 115165544 -30423744 - MER81 DNA DNA 0 114 1 295 328 30 99 chr10 115165544 115165611 -30423677 + L2 LINE L2 2992 3062 -251 1032 268 126 12 chr10 115165753 115166174 -30423114 + L1MC/D LINE L1 5264 5732 -2076 297 242 35 97 chr10 115166577 115166601 -30422687 - MIR SINE MIR -7 201 177 1602 175 18 4 chr10 115166601 115166918 -30422370 + AluJo SINE Alu 1 321 0 297 242 35 97 chr10 115166918 115167065 -30422223 - MIR SINE MIR -31 177 53 4588 187 37 23 chr10 115167473 115168880 -30420408 - L1MA9 LINE L1 0 6312 4883 232 192 19 19 chr10 115169184 115169236 -30420052 + CT-rich Low_complexity Low_complexity 1 52 0 249 307 99 20 chr10 115169510 115169611 -30419677 + MIR SINE MIR 32 140 -68 3768 237 71 46 chr10 115170105 115171219 -30418069 - L1MD2 LINE L1 -294 6065 4980 213 39 0 0 chr10 115171219 115171245 -30418043 + (TTA)n Simple_repeat Simple_repeat 2 27 0 3768 237 71 46 chr10 115171245 115171575 -30417713 - L1MD2 LINE L1 -1379 4980 4660 2212 106 0 0 chr10 115171575 115171889 -30417399 - AluSx SINE Alu 0 314 1 3768 237 71 46 chr10 115171889 115172687 -30416601 - L1MD2 LINE L1 -1699 4660 3759 700 261 35 39 chr10 115172699 115173010 -30416278 - L1MD2 LINE L1 -2569 3577 3268 530 289 65 33 chr10 115173219 115173555 -30415733 + L1ME LINE L1 5374 5720 -450 298 335 22 17 chr10 115173833 115174012 -30415276 - HERV16 LTR ERVL -113 4883 4704 2223 345 64 18 chr10 115174918 115175101 -30414187 - HERV16 LTR ERVL -1457 4197 4024 4910 143 12 6 chr10 115175101 115175764 -30413524 - L1PA16 LINE L1 0 6166 5509 1591 136 0 133 chr10 115175764 115176094 -30413194 - AluSx SINE Alu -25 287 2 4910 143 12 6 chr10 115176094 115177082 -30412206 - L1PA16 LINE L1 -657 5509 4504 2223 345 64 18 chr10 115177082 115178654 -30410634 - HERV16 LTR ERVL -1630 4024 2330 6451 158 33 22 chr10 115178695 115180825 -30408463 - L1MA8 LINE L1 -5 6286 4129 757 310 76 44 chr10 115180835 115180994 -30408294 - HERV16 LTR ERVL -3334 2320 2168 929 205 17 132 chr10 115180994 115181403 -30407885 - MLT1A1 LTR MaLR -3 362 1 757 310 76 44 chr10 115181403 115181679 -30407609 - HERV16 LTR ERVL -3486 2168 1871 1014 343 52 47 chr10 115181718 115182282 -30407006 - HERV16 LTR ERVL -3413 1583 1155 1507 244 25 69 chr10 115182523 115183157 -30406131 - L1M4 LINE L1 -2060 4086 3481 444 191 0 0 chr10 115183161 115183250 -30406038 + (CATA)n Simple_repeat Simple_repeat 3 91 0 407 283 33 57 chr10 115183250 115183494 -30405794 - L1M4 LINE L1 -2673 3473 3236 9606 137 24 8 chr10 115183542 115185101 -30404187 + Tigger1 DNA MER2_type 835 2418 0 208 304 18 0 chr10 115186286 115186342 -30402946 + L2 LINE L2 3250 3306 -7 238 229 98 0 chr10 115186622 115186683 -30402605 - MIR SINE MIR -60 148 82 347 300 23 31 chr10 115186807 115186937 -30402351 - MIR3 SINE MIR -5 203 75 22 56 0 0 chr10 115187062 115187098 -30402190 + AT_rich Low_complexity Low_complexity 1 36 0 214 162 0 0 chr10 115187797 115187834 -30401454 + (TG)n Simple_repeat Simple_repeat 1 37 0 1018 274 93 40 chr10 115188320 115188526 -30400762 - HsTC2a DNA Tc2 -1154 744 550 189 0 0 0 chr10 115188526 115188547 -30400741 + (TAAAA)n Simple_repeat Simple_repeat 4 24 0 1018 274 93 40 chr10 115188547 115188811 -30400477 - HsTC2a DNA Tc2 -1348 550 249 1804 53 0 0 chr10 115188863 115189088 -30400200 - L1PA3 LINE L1 -3 6152 5928 551 232 8 106 chr10 115189088 115189315 -30399973 - HsTC2a DNA Tc2 -506 238 78 2401 88 3 0 chr10 115190493 115190821 -30398467 - L1PA10 LINE L1 0 6168 5840 959 66 22 7 chr10 115190822 115190959 -30398329 + L1PA10 LINE L1 5701 5839 -322 482 266 13 19 chr10 115191423 115191581 -30397707 - MER103 DNA DNA 0 166 10 355 264 56 8 chr10 115191595 115191720 -30397568 + LTR33 LTR ERVL 373 503 -18 3719 121 6 6 chr10 115191993 115192520 -30396768 + MER1A DNA MER1_type 1 527 0 272 293 26 26 chr10 115193398 115193514 -30395774 - MLT1J2 LTR MaLR -250 200 85 213 154 0 0 chr10 115193744 115193783 -30395505 + (TG)n Simple_repeat Simple_repeat 2 40 0 514 316 6 12 chr10 115194213 115194381 -30394907 - MIR SINE MIR 0 262 96 369 317 54 54 chr10 115194837 115195023 -30394265 + MIR SINE MIR 76 261 -1 348 24 0 0 chr10 115195041 115195082 -30394206 + (CAT)n Simple_repeat Simple_repeat 1 41 0 366 23 0 0 chr10 115195816 115195859 -30393429 + (CA)n Simple_repeat Simple_repeat 1 43 0 270 314 46 69 chr10 115195923 115196098 -30393190 - L2 LINE L2 -120 3152 2982 26 30 0 0 chr10 115196135 115196168 -30393120 + AT_rich Low_complexity Low_complexity 1 33 0 495 337 73 35 chr10 115196314 115196577 -30392711 - L2 LINE L2 -549 2765 2480 294 29 0 0 chr10 115196577 115196612 -30392676 + (TG)n Simple_repeat Simple_repeat 1 35 0 495 337 73 35 chr10 115196612 115196746 -30392542 - L2 LINE L2 -834 2480 2353 204 179 39 0 chr10 115197474 115197552 -30391736 + (TAA)n Simple_repeat Simple_repeat 3 83 0 211 206 44 0 chr10 115197570 115197638 -30391650 + (TAA)n Simple_repeat Simple_repeat 1 71 0 480 288 31 58 chr10 115197666 115197892 -30391396 - MIR SINE MIR -2 260 41 686 141 0 0 chr10 115197942 115198041 -30391247 + AluJ/FLAM SINE Alu 1 99 -213 378 0 0 0 chr10 115198050 115198092 -30391196 + (CA)n Simple_repeat Simple_repeat 2 43 0 537 333 50 0 chr10 115198117 115198318 -30390970 - MIR SINE MIR -37 225 15 333 0 0 0 chr10 115199258 115199295 -30389993 + (CA)n Simple_repeat Simple_repeat 2 38 0 221 336 56 40 chr10 115199372 115199497 -30389791 - L2 LINE L2 -1 3271 3145 313 294 9 37 chr10 115199633 115199742 -30389546 + MIR SINE MIR 50 155 -107 182 333 18 0 chr10 115199795 115199852 -30389436 - L2 LINE L2 -218 3054 2997 224 308 144 10 chr10 115201317 115201421 -30387867 - MIR3 SINE MIR -49 159 42 228 340 43 11 chr10 115202155 115202249 -30387039 - MIR SINE MIR -95 113 17 345 355 0 0 chr10 115202389 115202499 -30386789 + MIR SINE MIR 51 160 -102 24 0 0 0 chr10 115202502 115202526 -30386762 + AT_rich Low_complexity Low_complexity 1 24 0 197 284 0 54 chr10 115202599 115202673 -30386615 + L2 LINE L2 3244 3313 0 41919 44 3 34 chr10 115203126 115209523 -30379765 - L1PA4 LINE L1 0 6155 3 738 284 69 23 chr10 115210088 115210391 -30378897 - L2 LINE L2 0 3313 2997 4346 143 35 30 chr10 115210440 115210899 -30378389 - L1PA16 LINE L1 -9 6157 5702 3336 82 13 9 chr10 115210899 115211350 -30377938 + MLT2A2 LTR ERVL 1 453 0 4346 143 35 30 chr10 115211350 115211656 -30377632 - L1PA16 LINE L1 -464 5702 5399 2616 49 0 0 chr10 115211656 115211961 -30377327 - AluY SINE Alu -6 305 1 4346 143 35 30 chr10 115211961 115212370 -30376918 - L1PA16 LINE L1 -767 5399 4915 872 177 51 6 chr10 115213902 115214077 -30375211 - MER20 DNA MER1_type -5 214 32 321 287 77 43 chr10 115214680 115214889 -30374399 - MIR SINE MIR -10 252 37 256 370 34 90 chr10 115214916 115215041 -30374247 - L2 LINE L2 -10 3262 3131 351 35 53 0 chr10 115215041 115215098 -30374190 + (TA)n Simple_repeat Simple_repeat 1 60 0 256 370 34 90 chr10 115215098 115215326 -30373962 - L2 LINE L2 -141 3131 2929 366 259 148 9 chr10 115215881 115215989 -30373299 - MER5A DNA MER1_type -1 188 66 314 223 33 0 chr10 115216137 115216258 -30373030 + (TA)n Simple_repeat Simple_repeat 1 125 0 248 282 43 77 chr10 115216316 115216433 -30372855 + MER5B DNA MER1_type 65 177 -1 324 193 29 14 chr10 115217473 115217616 -30371672 + GA-rich Low_complexity Low_complexity 1 145 0 492 292 77 5 chr10 115218065 115218260 -30371028 + LTR33 LTR ERVL 2 210 -311 506 200 26 17 chr10 115218392 115218507 -30370781 + LTR33 LTR ERVL 387 502 -19 2092 115 0 3 chr10 115219089 115219377 -30369911 - AluSg SINE Alu -23 287 1 198 220 0 0 chr10 115219381 115219440 -30369848 + (TTTA)n Simple_repeat Simple_repeat 1 59 0 233 325 134 13 chr10 115219887 115220044 -30369244 + MIR SINE MIR 37 212 -50 233 288 54 27 chr10 115220593 115220704 -30368584 - L3 LINE CR1 -202 1375 1262 383 307 47 54 chr10 115221458 115221704 -30367584 - MIR SINE MIR -15 247 6 234 212 24 12 chr10 115222197 115222282 -30367006 + GA-rich Low_complexity Low_complexity 2 87 0 426 20 0 0 chr10 115223215 115223266 -30366022 + (TG)n Simple_repeat Simple_repeat 2 52 0 621 283 63 82 chr10 115223486 115223913 -30365375 - MLT1J2 LTR MaLR 0 450 32 1149 177 28 0 chr10 115224248 115224463 -30364825 - MLT1B LTR MaLR -169 221 1 688 280 127 13 chr10 115225244 115225480 -30363808 - MLT1J2 LTR MaLR -119 331 69 225 261 145 0 chr10 115225529 115225598 -30363690 + MIR SINE MIR 179 257 -5 2688 45 0 3 chr10 115227146 115227458 -30361830 + AluY SINE Alu 1 311 0 1186 159 39 5 chr10 115227568 115227776 -30361512 - MER20 DNA MER1_type -3 216 2 238 311 22 44 chr10 115229225 115229315 -30359973 - MIR SINE MIR -100 108 21 207 0 0 0 chr10 115229537 115229560 -30359728 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 528 259 86 10 chr10 115230116 115230313 -30358975 + MER102a DNA MER1_type 83 294 -36 216 0 0 0 chr10 115230630 115230654 -30358634 + (CACAG)n Simple_repeat Simple_repeat 1 24 0 369 277 0 20 chr10 115231232 115231333 -30357955 - L1MC5 LINE L1 -50 7911 7813 477 229 60 42 chr10 115231703 115231869 -30357419 - L1MC5 LINE L1 -522 7439 7271 580 310 72 78 chr10 115232884 115233271 -30356017 - L2 LINE L2 0 3272 2888 2342 184 12 0 chr10 115234629 115235042 -30354246 + MER47B DNA MER2_type 1 418 0 200 216 0 0 chr10 115235643 115235680 -30353608 + MIR SINE MIR 156 192 -70 2337 97 0 16 chr10 115236467 115236777 -30352511 - AluSx SINE Alu -7 305 1 650 184 86 97 chr10 115236820 115237204 -30352084 - LTR48 LTR ERV1 0 787 281 24 0 0 0 chr10 115237233 115237257 -30352031 + AT_rich Low_complexity Low_complexity 1 24 0 595 231 0 0 chr10 115237258 115237375 -30351913 - FRAM SINE Alu -26 150 34 1485 149 53 7 chr10 115237375 115237656 -30351632 - LTR48 LTR ERV1 -493 294 1 2153 178 108 100 chr10 115237832 115238397 -30350891 - LTR8A LTR ERV1 0 727 153 2347 159 24 17 chr10 115238397 115238819 -30350469 - MER61B LTR ERV1 0 425 1 2153 178 108 100 chr10 115238819 115238972 -30350316 - LTR8A LTR ERV1 -574 153 3 225 279 16 16 chr10 115242169 115242230 -30347058 + L2 LINE L2 3212 3272 0 255 173 0 0 chr10 115242537 115242589 -30346699 + (CA)n Simple_repeat Simple_repeat 1 52 0 322 132 22 59 chr10 115243838 115243974 -30345314 + (TA)n Simple_repeat Simple_repeat 2 132 0 247 164 0 68 chr10 115243981 115244054 -30345234 + (CATATA)n Simple_repeat Simple_repeat 3 70 0 387 149 0 71 chr10 115244058 115244226 -30345062 + (TA)n Simple_repeat Simple_repeat 2 157 0 351 0 0 0 chr10 115244266 115244305 -30344983 + (TA)n Simple_repeat Simple_repeat 2 40 0 514 321 60 12 chr10 115244499 115244748 -30344540 - MIR SINE MIR 0 262 2 885 323 97 27 chr10 115245425 115246206 -30343082 - L2 LINE L2 0 3313 2469 386 299 27 54 chr10 115246401 115246548 -30342740 + MIR3 SINE MIR 51 193 -15 360 298 67 67 chr10 115247663 115247901 -30341387 + L3 LINE CR1 826 1063 -514 323 355 99 7 chr10 115248244 115248396 -30340892 + MIR SINE MIR 21 186 -76 648 299 20 53 chr10 115249463 115249707 -30339581 + MIR SINE MIR 24 259 -3 285 235 0 47 chr10 115250940 115251025 -30338263 + GA-rich Low_complexity Low_complexity 1 81 0 869 284 198 18 chr10 115251102 115251584 -30337704 - L2 LINE L2 0 3313 2744 307 299 66 55 chr10 115251606 115251880 -30337408 + L1M4 LINE L1 2679 2955 -3191 761 273 89 68 chr10 115251959 115252387 -30336901 + MLT1J2 LTR MaLR 1 437 -13 1341 242 61 79 chr10 115253555 115254063 -30335225 + MLT1H1 LTR MaLR 1 499 -56 658 279 103 52 chr10 115254108 115254649 -30334639 + L1M4 LINE L1 2874 3442 -2704 1254 180 26 0 chr10 115254676 115254909 -30334379 - L1MA7 LINE L1 -1242 4904 4666 1866 153 11 63 chr10 115254916 115255299 -30333989 + L1MA7 LINE L1 4936 5298 -941 2428 104 5 13 chr10 115255299 115255674 -30333614 + L1PA13 LINE L1 5789 6160 -3 1866 153 11 63 chr10 115255674 115255859 -30333429 + L1MA7 LINE L1 5298 5491 -748 477 208 0 62 chr10 115255858 115256002 -30333286 + L1PB4 LINE L1 6021 6155 -1 * 3678 173 30 17 chr10 115256013 115256817 -30332471 + L1MA7 LINE L1 5476 6289 -2 318 317 119 50 chr10 115257024 115257343 -30331945 + L1ME3A LINE L1 5607 5947 -215 388 310 35 35 chr10 115257562 115257765 -30331523 - MIR SINE MIR 0 262 60 30 45 0 0 chr10 115258542 115258586 -30330702 + AT_rich Low_complexity Low_complexity 1 44 0 302 312 38 70 chr10 115258693 115258879 -30330409 + MIR3 SINE MIR 24 203 -5 23 0 0 0 chr10 115259328 115259351 -30329937 + AT_rich Low_complexity Low_complexity 1 23 0 1444 195 20 31 chr10 115259572 115259864 -30329424 - AluJo SINE Alu -23 289 1 202 205 0 0 chr10 115260322 115260361 -30328927 + (CATATA)n Simple_repeat Simple_repeat 2 40 0 292 292 29 29 chr10 115260541 115260678 -30328610 - MIR SINE MIR 0 262 126 2093 169 47 50 chr10 115260687 115261172 -30328116 + L1MC3 LINE L1 7111 7594 -191 843 136 14 96 chr10 115261172 115261240 -30328048 + L1MC2 LINE L1 6137 6209 -135 1634 232 51 16 chr10 115261240 115261689 -30327599 + MLT1C LTR MaLR 1 465 -2 843 136 14 96 chr10 115261689 115261840 -30327448 + L1MC2 LINE L1 6209 6338 -6 4091 51 4 4 chr10 115261840 115262348 -30326940 - L1PA8 LINE L1 -2 6170 5658 629 166 46 20 chr10 115262354 115262505 -30326783 + L1M4 LINE L1 5422 5576 -608 2138 204 17 36 chr10 115263610 115264134 -30325154 + MER68 LTR ERV1 1 514 -48 21 36 0 0 chr10 115264693 115264721 -30324567 + AT_rich Low_complexity Low_complexity 1 28 0 218 250 26 26 chr10 115265447 115265523 -30323765 + MIR SINE MIR 116 191 -71 1011 87 74 0 chr10 115265527 115265676 -30323612 - L1PA10 LINE L1 -513 5655 5496 1847 62 12 4 chr10 115265676 115265934 -30323354 + L1PA10 LINE L1 5679 5938 -230 222 203 25 13 chr10 115266688 115266767 -30322521 + (TATATG)n Simple_repeat Simple_repeat 4 83 0 2773 135 0 25 chr10 115267109 115267547 -30321741 - MSTC LTR MaLR -1 427 1 205 229 42 0 chr10 115267680 115267728 -30321560 + CT-rich Low_complexity Low_complexity 5 54 0 523 350 10 15 chr10 115268133 115268339 -30320949 + MIR SINE MIR 54 258 -4 2487 156 63 34 chr10 115268606 115269143 -30320145 + L1MB8 LINE L1 5565 6117 -61 814 83 0 9 chr10 115269143 115269251 -30320037 + U6 snRNA snRNA 1 107 0 1744 70 0 0 chr10 115269251 115269478 -30319810 + L1PA7 LINE L1 5926 6152 -2 333 104 119 0 chr10 115269530 115269597 -30319691 + L1MB7 LINE L1 6110 6184 0 521 256 8 8 chr10 115269598 115269723 -30319565 - MIR SINE MIR -136 126 2 264 341 70 1 chr10 115270734 115270872 -30318416 + MIR SINE MIR 28 173 -62 194 306 16 16 chr10 115271256 115271318 -30317970 - L2 LINE L2 -8 3264 3203 316 282 137 0 chr10 115271951 115272068 -30317220 - MIR SINE MIR -95 167 35 450 278 9 9 chr10 115272445 115272560 -30316728 + L2 LINE L2 3199 3313 0 426 275 93 48 chr10 115272913 115273165 -30316123 + MIR SINE MIR 3 262 0 245 296 44 0 chr10 115273850 115273939 -30315349 - MIR SINE MIR -64 144 49 748 288 19 19 chr10 115274217 115274432 -30314856 - MIR SINE MIR -1 261 47 207 189 0 0 chr10 115274559 115274596 -30314692 + GA-rich Low_complexity Low_complexity 4 40 0 784 107 8 8 chr10 115275001 115275132 -30314156 + (TTCC)n Simple_repeat Simple_repeat 3 133 0 399 316 26 42 chr10 115275747 115275937 -30313351 - MER5A DNA MER1_type -1 188 2 816 299 125 3 chr10 115276042 115276370 -30312918 - LTR16A LTR ERVL 0 450 83 283 390 140 15 chr10 115276565 115276829 -30312459 + L2 LINE L2 2976 3272 0 327 283 28 28 chr10 115276957 115277063 -30312225 - MER5A DNA MER1_type -22 167 62 187 100 0 33 chr10 115278439 115278469 -30310819 + MER5B DNA MER1_type 25 53 -125 240 217 17 0 chr10 115278478 115278538 -30310750 - MLT1G1 LTR MaLR -2 588 528 292 305 35 35 chr10 115278646 115278787 -30310501 - MLT1G1 LTR MaLR -224 371 231 249 316 0 26 chr10 115278959 115279035 -30310253 + MER5A DNA MER1_type 80 153 -36 1747 305 73 56 chr10 115279214 115280268 -30309020 + L2 LINE L2 1867 2938 -376 1883 102 4 0 chr10 115280545 115280790 -30308498 - AluSq SINE Alu -67 246 1 1450 224 6 15 chr10 115280791 115281122 -30308166 - MER74A LTR ERVL -69 489 162 213 344 16 0 chr10 115281411 115281475 -30307813 + MIR SINE MIR 81 145 -63 21 36 0 0 chr10 115282651 115282679 -30306609 + AT_rich Low_complexity Low_complexity 1 28 0 1110 145 154 200 chr10 115284159 115284704 -30304584 - MLT2B1 LTR ERVL 0 520 1 432 321 40 22 chr10 115284852 115285076 -30304212 - MER21B LTR ERV1 -150 713 486 870 185 121 96 chr10 115285086 115285399 -30303889 + MLT1B LTR MaLR 45 365 -25 12944 31 1 2 chr10 115285401 115287818 -30301470 - L1PA3 LINE L1 0 6155 3760 5353 83 25 1 chr10 115288510 115289246 -30300042 - L1PA11 LINE L1 -3 6171 5419 184 419 67 18 chr10 115289280 115289607 -30299681 + L3 LINE CR1 35 377 -1200 237 33 0 0 chr10 115289909 115289939 -30299349 + (CA)n Simple_repeat Simple_repeat 2 31 0 26 0 0 0 chr10 115290020 115290046 -30299242 + AT_rich Low_complexity Low_complexity 1 26 0 2168 100 0 28 chr10 115290274 115290593 -30298695 - AluSx SINE Alu -2 310 1 289 324 67 36 chr10 115290987 115291212 -30298076 - L2 LINE L2 -5 3308 3077 550 291 29 34 chr10 115291237 115291443 -30297845 - MIR SINE MIR 0 262 58 289 284 219 7 chr10 115291434 115291589 -30297699 - L2 LINE L2 -248 3065 2878 * 220 411 24 6 chr10 115291884 115292052 -30297236 + L3 LINE CR1 507 677 -900 3358 202 48 3 chr10 115292053 115292741 -30296547 - MER52A LTR ERV1 0 1755 1037 1953 205 44 23 chr10 115292734 115293306 -30295982 - MER52C LTR ERV1 -439 839 1 * 216 331 45 13 chr10 115293314 115293468 -30295820 + L3 LINE CR1 685 843 -734 274 289 96 41 chr10 115293617 115293835 -30295453 + L3 LINE CR1 1053 1282 -295 467 306 96 5 chr10 115293903 115294102 -30295186 + Charlie8 DNA MER1_type 46 262 -2155 356 342 70 6 chr10 115294187 115294345 -30294943 + L3 LINE CR1 1307 1474 -103 267 293 9 47 chr10 115295370 115295476 -30293812 + MER5A DNA MER1_type 40 141 -48 21 0 0 0 chr10 115296466 115296487 -30292801 + AT_rich Low_complexity Low_complexity 1 21 0 663 268 39 46 chr10 115296512 115296618 -30292670 + MLT1J2 LTR MaLR 1 106 -344 2274 106 44 33 chr10 115296618 115296978 -30292310 - THE1B LTR MaLR 0 364 1 663 268 39 46 chr10 115296978 115297177 -30292111 + MLT1J2 LTR MaLR 106 304 -146 259 330 85 82 chr10 115297710 115298004 -30291284 + L2 LINE L2 2978 3272 0 5887 112 34 11 chr10 115298630 115300008 -30289280 - L1PA15 LINE L1 -5 6160 4752 2682 91 0 30 chr10 115300008 115300381 -30288907 + THE1B LTR MaLR 1 362 -2 5887 112 34 11 chr10 115300381 115300493 -30288795 - L1PA15 LINE L1 -1413 4752 4644 4019 161 13 1 chr10 115300495 115301276 -30288012 - L1 LINE L1 -1026 5120 4331 860 176 0 12 chr10 115301277 115301447 -30287841 - L1PA15 LINE L1 -1491 4655 4488 1286 113 39 0 chr10 115301544 115301747 -30287541 - L1PA13 LINE L1 -1 6162 5952 1906 129 134 9 chr10 115301852 115302359 -30286929 - MER51A LTR ERV1 0 634 1 321 352 30 87 chr10 115302384 115302648 -30286640 + L2 LINE L2 3016 3264 -8 1446 247 29 87 chr10 115304001 115304579 -30284709 + MLT1H LTR MaLR 1 545 -4 203 346 131 8 chr10 115304608 115304738 -30284550 + MIR SINE MIR 31 176 -86 545 198 0 10 chr10 115304909 115305005 -30284283 - FLAM_A SINE Alu -25 117 23 2096 128 0 0 chr10 115305467 115305756 -30283532 - AluSx SINE Alu -21 291 3 316 274 18 67 chr10 115306778 115306942 -30282346 - L2 LINE L2 0 3313 3158 2244 120 125 8 chr10 115306979 115307362 -30281926 + MSTA LTR MaLR 1 428 0 1746 294 81 33 chr10 115308204 115308897 -30280391 + L1M4b LINE L1 101 826 -6033 340 284 39 0 chr10 115308961 115309063 -30280225 - L1MEc LINE L1 -4703 1693 1588 * 901 218 50 29 chr10 115309047 115309327 -30279961 + L1M4b LINE L1 1891 2176 -4783 238 224 0 0 chr10 115309448 115309497 -30279791 - MLT1C LTR MaLR 0 467 419 24268 46 43 3 chr10 115309497 115312594 -30276694 + L1P LINE L1 6 3225 -2921 21 0 0 0 chr10 115313426 115313447 -30275841 + AT_rich Low_complexity Low_complexity 1 21 0 198 0 0 0 chr10 115316831 115316853 -30272435 + (T)n Simple_repeat Simple_repeat 1 22 0 3316 203 25 37 chr10 115316948 115317966 -30271322 - L1ME2 LINE L1 0 6164 5161 2431 278 55 14 chr10 115318162 115318931 -30270357 + MER69 DNA AcHobo 262 1061 -1465 1027 260 74 24 chr10 115318974 115319351 -30269937 + MER69 DNA AcHobo 1749 2144 -382 297 217 0 0 chr10 115319400 115319469 -30269819 + MER69 DNA AcHobo 2420 2488 -38 25 0 0 0 chr10 115319960 115319985 -30269303 + AT_rich Low_complexity Low_complexity 1 25 0 325 312 131 27 chr10 115320686 115320984 -30268304 + L2 LINE L2 2953 3281 -32 254 287 62 54 chr10 115321872 115322001 -30267287 + MIR3 SINE MIR 13 142 -66 2191 121 0 0 chr10 115322068 115322373 -30266915 - AluY SINE Alu -6 305 1 686 307 129 42 chr10 115322393 115323163 -30266125 + L2 LINE L2 2480 3313 0 27 49 0 0 chr10 115324553 115324594 -30264694 + AT_rich Low_complexity Low_complexity 1 41 0 907 164 7 0 chr10 115324691 115324837 -30264451 + FRAM SINE Alu 1 146 -30 24 0 0 0 chr10 115324837 115324861 -30264427 + AT_rich Low_complexity Low_complexity 1 24 0 1897 126 65 0 chr10 115324899 115325192 -30264096 - AluSx SINE Alu 0 312 1 856 300 42 4 chr10 115327016 115327256 -30262032 + LTR16A LTR ERVL 88 336 -114 32 67 0 0 chr10 115327354 115327414 -30261874 + AT_rich Low_complexity Low_complexity 1 60 0 205 200 0 0 chr10 115328329 115328369 -30260919 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 1236 244 38 5 chr10 115329277 115329612 -30259676 + L1ME3A LINE L1 5703 6053 -117 550 72 12 0 chr10 115329612 115329695 -30259593 - L1PA13 LINE L1 -3 6160 6077 1236 244 38 5 chr10 115329695 115329728 -30259560 + L1ME3A LINE L1 6053 6083 -87 1138 215 116 17 chr10 115330341 115330510 -30258778 + MER2 DNA MER2_type 24 175 -170 2283 93 0 20 chr10 115330510 115330810 -30258478 + AluSg SINE Alu 1 294 -16 1138 215 116 17 chr10 115330810 115330933 -30258355 + MER2 DNA MER2_type 175 345 0 502 69 39 10 chr10 115330959 115331061 -30258227 + (TCTA)n Simple_repeat Simple_repeat 2 106 0 28 79 0 0 chr10 115331303 115331366 -30257922 + AT_rich Low_complexity Low_complexity 1 63 0 528 258 96 79 chr10 115331410 115332196 -30257092 + L1ME3A LINE L1 871 1636 -4579 * 831 262 100 40 chr10 115332163 115332812 -30256476 + L1ME3A LINE L1 4750 5437 -778 378 42 0 0 chr10 115332813 115332861 -30256427 + (CA)n Simple_repeat Simple_repeat 1 48 0 230 71 0 24 chr10 115332964 115333006 -30256282 + (TC)n Simple_repeat Simple_repeat 2 42 0 389 183 0 0 chr10 115333007 115333067 -30256221 - AluJ/FRAM SINE Alu -14 288 229 291 213 187 77 chr10 115333068 115333223 -30256065 + L1ME3A LINE L1 5536 5707 -532 419 217 57 26 chr10 115333270 115333464 -30255824 - LTR16C LTR ERVL -104 387 141 1314 267 36 46 chr10 115333604 115334125 -30255163 + L1ME3A LINE L1 5681 6196 -43 2248 104 0 10 chr10 115335103 115335411 -30253877 - AluSg SINE Alu -5 305 1 2146 125 0 13 chr10 115335423 115335726 -30253562 - AluSx SINE Alu -13 299 1 1643 55 0 20 chr10 115336414 115336639 -30252649 + AluY SINE Alu 87 307 0 1845 204 143 2 chr10 115336747 115337179 -30252109 + MER67D LTR ERV1 22 514 0 2049 100 0 75 chr10 115337696 115338017 -30251271 + AluSx SINE Alu 1 297 -15 267 270 250 10 chr10 115338030 115338130 -30251158 + L2 LINE L2 3182 3305 -8 2074 103 38 3 chr10 115338533 115338824 -30250464 - AluSp SINE Alu -12 301 1 469 310 119 42 chr10 115338933 115339504 -30249784 - MLT1L LTR MaLR 0 615 1 780 264 61 0 chr10 115339514 115339726 -30249562 - MIR SINE MIR -2 260 36 298 289 35 0 chr10 115340471 115340585 -30248703 + L1MC4 LINE L1 7924 8041 -1 1279 151 109 74 chr10 115341396 115341773 -30247515 - MLT1B LTR MaLR 0 390 1 25 0 0 0 chr10 115342032 115342057 -30247231 + AT_rich Low_complexity Low_complexity 1 25 0 958 184 30 40 chr10 115342087 115342288 -30247000 + AluJo SINE Alu 1 199 -113 351 161 0 0 chr10 115342341 115342403 -30246885 + MER53 DNA DNA 127 188 -1 1620 216 26 40 chr10 115342803 115343224 -30246064 + MLT1C LTR MaLR 2 416 -51 477 150 0 0 chr10 115343224 115343304 -30245984 + L1PA16 LINE L1 5895 5974 -192 1978 154 3 0 chr10 115343304 115343597 -30245691 + AluSx SINE Alu 1 294 -18 1128 146 21 12 chr10 115343613 115343820 -30245468 + L1PA16 LINE L1 5946 6157 -3 410 134 0 16 chr10 115343825 115343897 -30245391 + MLT1C LTR MaLR 320 467 0 22 35 0 0 chr10 115345200 115345229 -30244059 + AT_rich Low_complexity Low_complexity 1 29 0 314 306 40 8 chr10 115345586 115345710 -30243578 + L2 LINE L2 1302 1429 -1885 1243 239 49 69 chr10 115345743 115346233 -30243055 + MLT1D LTR MaLR 1 480 -25 214 177 48 16 chr10 115346285 115346347 -30242941 + (CAAAC)n Simple_repeat Simple_repeat 3 66 0 411 330 117 20 chr10 115346385 115346737 -30242551 + L2 LINE L2 1711 2096 -1218 433 301 26 0 chr10 115346787 115346940 -30242348 - LTR33A LTR ERVL -4 519 363 481 320 76 24 chr10 115346949 115347277 -30242011 + L2 LINE L2 2262 2606 -708 343 294 59 48 chr10 115347901 115348078 -30241210 + L2 LINE L2 3125 3306 -7 1695 174 3 7 chr10 115348078 115348365 -30240923 + AluJo SINE Alu 1 286 -26 1025 142 26 0 chr10 115349214 115349369 -30239919 - AluJ SINE Alu -18 294 136 1062 129 60 129 chr10 115349474 115349822 -30239466 - L1MC3 LINE L1 -1 7784 7461 234 0 0 0 chr10 115349878 115349904 -30239384 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 802 172 0 16 chr10 115349904 115350032 -30239256 - AluJ SINE Alu -186 126 1 327 262 35 76 chr10 115350083 115350228 -30239060 + MLT1J LTR MaLR 108 246 -265 1532 157 16 20 chr10 115350375 115350681 -30238607 - L1MB8 LINE L1 -1 6177 5873 5831 75 52 30 chr10 115350703 115352009 -30237279 + L1PA10 LINE L1 4806 6168 0 1538 178 0 22 chr10 115352033 115352303 -30236985 - AluJo SINE Alu -35 277 14 1173 199 37 0 chr10 115352311 115352552 -30236736 - L1MB8 LINE L1 -296 5888 5639 329 298 35 57 chr10 115352552 115352789 -30236499 + MLT1J LTR MaLR 279 614 -1 584 156 59 39 chr10 115353485 115353644 -30235644 + L1ME1 LINE L1 6032 6161 -5 488 255 9 0 chr10 115353987 115354093 -30235195 - MER81 DNA DNA -1 113 7 189 0 0 0 chr10 115354095 115354116 -30235172 + (T)n Simple_repeat Simple_repeat 1 21 0 301 199 81 81 chr10 115354722 115354858 -30234430 + MIR SINE MIR 113 248 -14 2246 237 62 29 chr10 115355050 115355270 -30234018 - MLT1E1 LTR MaLR -3 651 440 2427 96 0 0 chr10 115355270 115355582 -30233706 - AluSx SINE Alu 0 312 1 2246 237 62 29 chr10 115355582 115355986 -30233302 - MLT1E1 LTR MaLR -214 440 6 244 281 156 24 chr10 115356120 115356287 -30233001 - L2 LINE L2 -667 2647 2459 2102 209 133 6 chr10 115356288 115356791 -30232497 - MLT1F1 LTR MaLR 0 567 1 192 388 43 9 chr10 115356970 115357086 -30232202 - L2 LINE L2 -238 3034 2915 545 191 75 108 chr10 115358355 115358596 -30230692 + MER106A DNA MER1_type 1 233 -3 564 224 8 60 chr10 115358634 115358768 -30230520 + L2 LINE L2 3187 3313 0 227 361 168 17 chr10 115358936 115359282 -30230006 + L2 LINE L2 2856 3253 -19 8854 118 13 2 chr10 115359625 115360017 -30229271 - L1PA10 LINE L1 0 6168 5782 2338 100 3 0 chr10 115360017 115360327 -30228961 - AluY SINE Alu 0 311 1 8854 118 13 2 chr10 115360327 115362102 -30227186 - L1PA10 LINE L1 -386 5782 4000 374 237 61 24 chr10 115362159 115362305 -30226983 - MIR SINE MIR -14 248 98 1987 173 55 0 chr10 115362326 115362672 -30226616 + MLT1A1 LTR MaLR 1 365 0 1316 236 31 6 chr10 115362777 115363103 -30226185 - MER58B DNA MER1_type -7 334 1 204 286 0 36 chr10 115363235 115363291 -30225997 - MIR SINE MIR -162 100 47 620 184 72 7 chr10 115363657 115363809 -30225479 + L1MD3 LINE L1 7834 7995 0 282 185 0 31 chr10 115364521 115364586 -30224702 + HsTC2 DNA Tc2 1 63 -1835 334 180 16 0 chr10 115364600 115364661 -30224627 - FRAM/FAM SINE Alu -106 60 1 1105 155 0 0 chr10 115364691 115364859 -30224429 + FRAM SINE Alu 8 175 -1 410 303 79 59 chr10 115364909 115365199 -30224089 - L1MEd LINE L1 -5494 625 330 261 191 73 0 chr10 115365242 115365310 -30223978 + HsTC2 DNA Tc2 1825 1897 -1 204 306 48 16 chr10 115366304 115366366 -30222922 + MER91A DNA MER1_type 123 186 -10 295 317 29 10 chr10 115367211 115367315 -30221973 - L3 LINE CR1 0 1577 1472 1626 203 32 45 chr10 115367371 115367572 -30221716 + MLT1A2 LTR MaLR 1 196 -178 2047 124 27 46 chr10 115367572 115367943 -30221345 + THE1B LTR MaLR 1 364 0 1626 203 32 45 chr10 115367943 115368120 -30221168 + MLT1A2 LTR MaLR 196 374 0 433 307 112 5 chr10 115368295 115368500 -30220788 + MIR SINE MIR 21 247 -15 25 51 0 0 chr10 115369334 115369373 -30219915 + AT_rich Low_complexity Low_complexity 1 39 0 21 0 0 0 chr10 115369424 115369445 -30219843 + AT_rich Low_complexity Low_complexity 1 21 0 307 283 83 54 chr10 115369683 115369888 -30219400 + L1ME4a LINE L1 5698 5908 -213 849 287 22 4 chr10 115370237 115370467 -30218821 - MIR SINE MIR -28 234 1 186 43 0 0 chr10 115370832 115370855 -30218433 + (CCAA)n Simple_repeat Simple_repeat 2 24 0 2334 106 141 76 chr10 115371378 115371852 -30217436 + MER41B LTR ERV1 1 505 -130 1275 102 0 0 chr10 115371852 115372019 -30217269 - AluSp SINE Alu -6 307 141 1056 65 0 0 chr10 115372024 115372162 -30217126 + MER41A LTR ERV1 417 554 0 1846 220 65 65 chr10 115372853 115373407 -30215881 + MLT2B3 LTR ERVL 1 554 0 237 222 0 0 chr10 115374369 115374414 -30214874 + (TG)n Simple_repeat Simple_repeat 2 46 0 2044 139 0 0 chr10 115374942 115375230 -30214058 + AluSx SINE Alu 1 288 -24 3677 145 23 29 chr10 115375952 115376609 -30212679 + MER39B LTR ERV1 1 653 0 2335 90 0 3 chr10 115376905 115377206 -30212082 + AluSq SINE Alu 1 300 -13 29 0 0 0 chr10 115378274 115378303 -30210985 + AT_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr10 115380156 115380181 -30209107 + AT_rich Low_complexity Low_complexity 1 25 0 369 322 49 7 chr10 115380199 115380342 -30208946 - MIR SINE MIR -31 231 83 287 333 118 31 chr10 115380375 115380570 -30208718 + MIR SINE MIR 38 249 -13 230 344 67 31 chr10 115380558 115380725 -30208563 - MIR SINE MIR -63 145 17 * 331 307 114 61 chr10 115382497 115382725 -30206563 + HAL1 LINE L1 238 477 -2030 789 254 41 0 chr10 115382744 115382913 -30206375 + MER45A DNA AcHobo 3 178 0 724 250 36 87 chr10 115383184 115383441 -30205847 + HAL1 LINE L1 745 1014 -1493 2703 112 38 35 chr10 115383441 115383791 -30205497 + MSTA LTR MaLR 1 349 -79 194 0 39 0 chr10 115383791 115383817 -30205471 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1890 81 84 19 chr10 115383820 115384081 -30205207 - AluSc SINE Alu -31 278 1 2703 112 38 35 chr10 115384081 115384153 -30205135 + MSTA LTR MaLR 350 428 0 724 250 36 87 chr10 115384153 115384434 -30204854 + HAL1 LINE L1 1014 1352 -1155 729 276 168 28 chr10 115384502 115384926 -30204362 + HAL1 LINE L1 1472 1954 -553 318 296 96 63 chr10 115385012 115385377 -30203911 + HAL1 LINE L1 1996 2372 -135 25 0 0 0 chr10 115385413 115385438 -30203850 + AT_rich Low_complexity Low_complexity 1 25 0 21 82 0 0 chr10 115386255 115386304 -30202984 + AT_rich Low_complexity Low_complexity 1 49 0 269 242 139 91 chr10 115386465 115386630 -30202658 + MIR SINE MIR 20 192 -70 664 269 56 34 chr10 115386753 115386987 -30202301 - MIR SINE MIR 0 262 24 295 58 0 39 chr10 115387171 115387223 -30202065 + (TTTTA)n Simple_repeat Simple_repeat 1 50 0 1617 42 0 0 chr10 115387223 115387413 -30201875 - L1PA3 LINE L1 -24 6131 5942 225 154 0 0 chr10 115387608 115387647 -30201641 - MIR3 SINE MIR 0 208 170 263 371 0 0 chr10 115387863 115387960 -30201328 + MIR3 SINE MIR 81 177 -31 225 304 71 48 chr10 115389501 115389669 -30199619 + MER5A DNA MER1_type 14 185 -4 * 722 209 13 26 chr10 115389531 115389684 -30199604 - MER5A DNA MER1_type -35 154 4 205 189 0 0 chr10 115390240 115390277 -30199011 + A-rich Low_complexity Low_complexity 2 38 0 2144 103 14 3 chr10 115391019 115391309 -30197979 + AluSp SINE Alu 1 293 -20 251 333 26 26 chr10 115391541 115391658 -30197630 - MIR SINE MIR -133 129 13 26 64 0 0 chr10 115391749 115391796 -30197492 + AT_rich Low_complexity Low_complexity 1 47 0 27 0 0 0 chr10 115393020 115393047 -30196241 + AT_rich Low_complexity Low_complexity 1 27 0 198 320 139 66 chr10 115393400 115393522 -30195766 + L3b LINE CR1 1450 1580 -3 374 240 214 30 chr10 115393635 115393824 -30195464 - MIR SINE MIR -24 238 13 308 336 154 23 chr10 115394357 115394753 -30194535 - L2 LINE L2 -435 2879 2432 777 177 0 0 chr10 115394763 115394893 -30194395 - FLAM_C SINE Alu -7 136 7 539 168 29 139 chr10 115395045 115395254 -30194034 - MER53 DNA DNA 0 189 4 210 37 0 0 chr10 115395469 115395496 -30193792 + (TG)n Simple_repeat Simple_repeat 2 28 0 386 298 125 16 chr10 115395845 115396261 -30193027 + L1MC4a LINE L1 5378 5707 -414 419 278 123 63 chr10 115396831 115397133 -30192155 + HAL1 LINE L1 848 1167 -1340 24 0 0 0 chr10 115397170 115397194 -30192094 + AT_rich Low_complexity Low_complexity 1 24 0 276 206 15 15 chr10 115397214 115397282 -30192006 + HAL1 LINE L1 1835 1902 -605 2204 118 0 3 chr10 115397317 115397613 -30191675 - AluSq SINE Alu -18 295 1 315 86 29 14 chr10 115397658 115397728 -30191560 + (TAA)n Simple_repeat Simple_repeat 2 72 0 1149 153 5 16 chr10 115397767 115397957 -30191331 - MER57A-int LTR ERV1 -1525 6012 5825 1394 115 0 23 chr10 115398285 115398503 -30190785 - MER57A-int LTR ERV1 -1716 5821 5609 351 0 0 0 chr10 115398503 115398542 -30190746 + (CA)n Simple_repeat Simple_repeat 1 39 0 885 178 38 45 chr10 115398569 115399364 -30189924 - MER57A-int LTR ERV1 -2390 3941 1721 532 217 19 0 chr10 115399481 115399587 -30189701 - MER57A-int LTR ERV1 -2872 3459 3352 1146 163 11 63 chr10 115399646 115399916 -30189372 - MER57A-int LTR ERV1 -2995 3336 3081 460 195 0 51 chr10 115400014 115400159 -30189129 - MER57A-int LTR ERV1 -3681 1294 1096 464 291 76 33 chr10 115400166 115400376 -30188912 - MER34C LTR ERV1 -177 408 190 444 229 46 57 chr10 115400387 115400562 -30188726 - MER57A-int LTR ERV1 -4120 1003 831 425 167 12 12 chr10 115400655 115400739 -30188549 - MER57A-int LTR ERV1 -6695 842 759 574 79 22 0 chr10 115400739 115400828 -30188460 + (TA)n Simple_repeat Simple_repeat 2 92 0 672 202 8 0 chr10 115400839 115400963 -30188325 + FLAM_C SINE Alu 1 125 -8 3387 199 19 57 chr10 115400982 115401261 -30188027 - MER57A-int LTR ERV1 -6777 760 472 2140 110 0 32 chr10 115401261 115401430 -30187858 - AluSg SINE Alu -10 300 144 2428 79 0 3 chr10 115401430 115401733 -30187555 - AluY SINE Alu -9 302 1 2140 110 0 32 chr10 115401733 115401873 -30187415 - AluSg SINE Alu -166 144 1 3387 199 19 57 chr10 115401873 115402383 -30186905 - MER57A-int LTR ERV1 -7065 472 1 2323 152 10 20 chr10 115402383 115402790 -30186498 - MER57A LTR ERV1 0 403 1 2867 272 38 24 chr10 115402790 115402933 -30186355 - L1M4 LINE L1 -1049 5097 4957 198 0 0 0 chr10 115402933 115402955 -30186333 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 2867 272 38 24 chr10 115402955 115403133 -30186155 - L1M4 LINE L1 -1189 4957 4783 3983 97 9 0 chr10 115403133 115403682 -30185606 - MER41A LTR ERV1 0 554 1 2867 272 38 24 chr10 115403682 115404052 -30185236 - L1M4 LINE L1 -1363 4783 4419 2292 126 141 58 chr10 115404052 115404599 -30184689 + LTR49 LTR ERV1 4 595 0 2867 272 38 24 chr10 115404599 115404969 -30184319 - L1M4 LINE L1 -1727 4419 4020 212 83 0 28 chr10 115404983 115405019 -30184269 + (TTTC)n Simple_repeat Simple_repeat 1 35 0 5405 108 5 10 chr10 115405019 115405878 -30183410 - L1PA15 LINE L1 0 6165 5303 8365 70 2 6 chr10 115405878 115406953 -30182335 + MER11C LTR ERVK 1 1071 0 5405 108 5 10 chr10 115406953 115407639 -30181649 - L1PA15 LINE L1 -862 5303 4615 11796 192 46 2 chr10 115407641 115409934 -30179354 + L1M1 LINE L1 24 2418 -5147 1116 68 6 6 chr10 115409944 115410107 -30179181 + MER41A LTR ERV1 392 554 0 3042 254 72 17 chr10 115410168 115412266 -30177022 - L1MCb LINE L1 -4352 2393 3 26 0 0 0 chr10 115412296 115412322 -30176966 + AT_rich Low_complexity Low_complexity 1 26 0 207 182 0 0 chr10 115413315 115413348 -30175940 + A-rich Low_complexity Low_complexity 1 33 0 2139 113 3 0 chr10 115415926 115416209 -30173079 + AluSq SINE Alu 1 284 -29 231 157 0 0 chr10 115416225 115416276 -30173012 - LTR66 LTR ERVL -166 444 394 361 278 0 0 chr10 115416280 115416370 -30172918 - L1MC4 LINE L1 -1339 6703 6614 340 270 22 0 chr10 115416290 115416379 -30172909 + L1MC4 LINE L1 6614 6704 -1338 * 605 192 4 81 chr10 115416951 115417222 -30172066 + MER31-int LTR ERV1 1313 1667 -3269 288 268 216 0 chr10 115418154 115418251 -30171037 + L2 LINE L2 3180 3297 -16 225 225 0 0 chr10 115418217 115418257 -30171031 + MIR SINE MIR 219 258 -4 * 185 383 99 6 chr10 115418408 115418570 -30170718 + MIR3 SINE MIR 15 191 -17 1695 190 15 75 chr10 115419858 115420336 -30168952 - L1MA7 LINE L1 -11 6280 5832 213 65 0 0 chr10 115421146 115421177 -30168111 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 206 61 0 30 chr10 115421820 115421853 -30167435 + (CAT)n Simple_repeat Simple_repeat 2 33 0 2305 109 3 0 chr10 115422060 115422371 -30166917 + AluSq SINE Alu 2 313 0 290 167 0 15 chr10 115422506 115422572 -30166716 + CT-rich Low_complexity Low_complexity 4 68 0 313 298 37 9 chr10 115423398 115423516 -30165772 + MIR SINE MIR 53 172 -36 371 365 0 0 chr10 115427194 115427320 -30161968 + L2 LINE L2 3188 3313 0 181 362 17 0 chr10 115429380 115429438 -30159850 + L2 LINE L2 1159 1217 -2097 653 233 15 89 chr10 115429879 115430007 -30159281 - MER5A DNA MER1_type 0 189 80 2296 104 0 22 chr10 115430007 115430323 -30158965 - AluSc SINE Alu 0 309 1 653 233 15 89 chr10 115430323 115430396 -30158892 - MER5A DNA MER1_type -109 80 3 21 0 0 0 chr10 115430696 115430717 -30158571 + AT_rich Low_complexity Low_complexity 1 21 0 1711 197 40 0 chr10 115431914 115432331 -30156957 + AluJo SINE Alu 1 429 0 204 253 81 81 chr10 115432465 115432552 -30156736 + MIR SINE MIR 24 110 -98 218 264 42 14 chr10 115433120 115433192 -30156096 + MIR SINE MIR 117 190 -72 557 303 37 45 chr10 115434120 115434364 -30154924 + MIR SINE MIR 21 262 0 184 313 43 78 chr10 115434409 115434524 -30154764 - L2 LINE L2 -26 3246 3136 653 313 15 5 chr10 115435395 115435590 -30153698 - MIR SINE MIR -47 215 19 236 398 11 0 chr10 115436831 115436924 -30152364 - MIR3 SINE MIR -41 167 74 244 235 0 74 chr10 115437067 115437148 -30152140 + Tigger1 DNA MER2_type 26 100 -2318 2376 99 0 3 chr10 115437148 115437460 -30151828 - AluSx SINE Alu -1 311 1 13217 130 22 34 chr10 115437532 115439345 -30149943 + Tigger1 DNA MER2_type 94 1875 -543 902 160 6 6 chr10 115439345 115439501 -30149787 + L1PB4 LINE L1 6001 6156 0 13217 130 22 34 chr10 115439501 115440038 -30149250 + Tigger1 DNA MER2_type 1875 2417 -1 1548 218 89 34 chr10 115440691 115441164 -30148124 + MLT1D LTR MaLR 3 501 -4 197 356 23 23 chr10 115441282 115441407 -30147881 - MIR SINE MIR -67 141 34 483 311 119 0 chr10 115441945 115442122 -30147166 - MIR SINE MIR -11 251 54 935 163 27 0 chr10 115442138 115442285 -30147003 + FRAM SINE Alu 4 154 -12 403 281 213 45 chr10 115444144 115444338 -30144950 + L2 LINE L2 2429 2589 -724 1661 172 7 17 chr10 115444338 115444635 -30144653 - AluJo SINE Alu -18 294 1 403 281 213 45 chr10 115444635 115445160 -30144128 + L2 LINE L2 2589 3286 -27 653 199 18 17 chr10 115445203 115445498 -30143790 + CT-rich Low_complexity Low_complexity 1 295 0 533 198 13 168 chr10 115445754 115445986 -30143302 + MIR SINE MIR 23 218 -44 2288 76 30 10 chr10 115445987 115446290 -30142998 + AluY SINE Alu 1 309 -2 432 342 75 55 chr10 115446776 115447232 -30142056 + L2 LINE L2 2804 3268 -4 326 172 0 16 chr10 115448015 115448071 -30141217 - MLT1A2 LTR MaLR 0 374 320 1017 104 131 27 chr10 115448071 115448254 -30141034 - MER1B DNA MER1_type 0 339 138 216 204 0 0 chr10 115449176 115449220 -30140068 + T-rich Low_complexity Low_complexity 1 44 0 228 246 33 16 chr10 115449837 115449898 -30139390 + MIR SINE MIR 190 251 -11 1746 198 0 6 chr10 115450058 115450372 -30138916 + AluJo SINE Alu 1 312 0 280 262 11 24 chr10 115450977 115451181 -30138107 - MER46C DNA MER2_type -25 313 63 232 89 22 22 chr10 115451181 115451226 -30138062 + (GGAA)n Simple_repeat Simple_repeat 1 45 0 360 289 81 61 chr10 115451592 115451789 -30137499 - MIR SINE MIR -9 253 53 544 308 70 51 chr10 115452136 115452315 -30136973 + ERVL LTR ERVL 4232 4421 -1343 677 212 35 59 chr10 115452315 115452485 -30136803 + FRAM SINE Alu 1 166 0 544 308 70 51 chr10 115452485 115452617 -30136671 + ERVL LTR ERVL 4421 4549 -1215 522 0 0 0 chr10 115452770 115452828 -30136460 + (CA)n Simple_repeat Simple_repeat 1 58 0 458 287 86 31 chr10 115452829 115453269 -30136019 + ERVL LTR ERVL 4937 5436 -328 649 364 21 30 chr10 115453424 115453853 -30135435 + LTR16B LTR ERVL 1 425 -39 316 273 107 15 chr10 115454232 115454437 -30134851 + LTR67 LTR ERVL 329 552 -5 1280 275 71 2 chr10 115454456 115454922 -30134366 - LTR33 LTR ERVL -23 498 1 253 0 0 0 chr10 115455001 115455037 -30134251 - L1PA3 LINE L1 -3 6152 6117 489 307 31 8 chr10 115455155 115455412 -30133876 - L1MEc LINE L1 -4755 1641 1379 1163 129 19 29 chr10 115455496 115455705 -30133583 - THE1C LTR MaLR 0 375 169 21 0 0 0 chr10 115456282 115456303 -30132985 + AT_rich Low_complexity Low_complexity 1 21 0 189 378 90 9 chr10 115457737 115457848 -30131440 - L2 LINE L2 0 3272 3153 1820 155 20 59 chr10 115458579 115458934 -30130354 - L1MB1 LINE L1 -371 5797 5457 2214 153 8 0 chr10 115458934 115459280 -30130008 + L1MB1 LINE L1 5810 6166 -2 748 279 79 4 chr10 115460931 115461171 -30128117 + LTR16C LTR ERVL 234 491 0 405 299 206 34 chr10 115461189 115461393 -30127895 + MIR SINE MIR 14 252 -10 224 396 19 9 chr10 115461432 115461538 -30127750 - L2 LINE L2 -41 3231 3125 21 0 0 0 chr10 115462443 115462464 -30126824 + AT_rich Low_complexity Low_complexity 1 21 0 1196 334 65 32 chr10 115463567 115464225 -30125063 + ERVL LTR ERVL 3912 4591 -1063 224 30 30 0 chr10 115464225 115464258 -30125030 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 45006 39 1 2 chr10 115464258 115470414 -30118874 - L1PA3 LINE L1 0 6155 9 721 287 65 29 chr10 115470589 115470804 -30118484 + ERVL LTR ERVL 4818 5049 -715 1505 166 80 83 chr10 115470804 115471178 -30118110 + MLT1A2 LTR MaLR 1 373 -1 721 287 65 29 chr10 115471178 115471272 -30118016 + ERVL LTR ERVL 5049 5138 -626 1824 173 67 60 chr10 115471447 115471605 -30117683 - LTR23 LTR ERV1 0 437 282 669 211 8 30 chr10 115471605 115471738 -30117550 - FLAM_C SINE Alu -2 131 2 1824 173 67 60 chr10 115471738 115472013 -30117275 - LTR23 LTR ERV1 -155 282 1 412 284 37 30 chr10 115472158 115472292 -30116996 + LTR16C LTR ERVL 354 488 -3 1977 115 72 8 chr10 115472346 115472713 -30116575 - LTR7 LTR ERV1 0 450 1 3708 113 7 12 chr10 115472713 115473273 -30116015 - HERVH LTR ERV1 0 7713 7157 2312 170 14 5 chr10 115473266 115473689 -30115599 - HERVH LTR ERV1 -1697 6016 5590 * 7401 132 18 5 chr10 115473680 115475515 -30113773 - HERVH LTR ERV1 -1805 5286 3357 13180 116 6 45 chr10 115475515 115478128 -30111160 - HERVH LTR ERV1 -4883 2830 1 2025 112 69 10 chr10 115478128 115478496 -30110792 - LTR7 LTR ERV1 0 450 1 376 161 0 54 chr10 115478514 115478607 -30110681 - L1PA11 LINE L1 0 6174 6087 1320 188 52 53 chr10 115478666 115479046 -30110242 + MER67C LTR ERV1 1 401 -246 265 326 82 7 chr10 115479063 115479198 -30110090 + MER67D LTR ERV1 362 506 -8 240 341 87 62 chr10 115479584 115479733 -30109555 + L2 LINE L2 2934 3091 -181 1975 116 0 7 chr10 115479733 115480069 -30109219 - AluSq SINE Alu 0 313 22 240 341 87 62 chr10 115480069 115480127 -30109161 + L2 LINE L2 3091 3146 -126 214 245 0 0 chr10 115480165 115480214 -30109074 + L2 LINE L2 3263 3311 -2 449 315 35 25 chr10 115481618 115481815 -30107473 - MIR SINE MIR -12 250 52 296 304 36 51 chr10 115482441 115482579 -30106709 + MIR SINE MIR 12 147 -115 1006 236 14 19 chr10 115483877 115484093 -30105195 + MER20 DNA MER1_type 1 215 -4 753 340 190 3 chr10 115484317 115484897 -30104391 + L2 LINE L2 892 1579 -1735 311 294 51 40 chr10 115484909 115485086 -30104202 + L2 LINE L2 3110 3288 -25 181 341 73 0 chr10 115485226 115485308 -30103980 + L2 LINE L2 3216 3303 -10 863 185 13 6 chr10 115486050 115486207 -30103081 + MLT1A2 LTR MaLR 1 158 -216 216 0 0 0 chr10 115486222 115486246 -30103042 + (TC)n Simple_repeat Simple_repeat 1 24 0 * 438 20 0 0 chr10 115486245 115486296 -30102992 + (CA)n Simple_repeat Simple_repeat 1 51 0 302 324 42 28 chr10 115586563 115586705 -30002583 - L2 LINE L2 -9 3304 3161 255 285 20 40 chr10 115587569 115587720 -30001568 + CT-rich Low_complexity Low_complexity 5 152 0 1928 282 47 63 chr10 115587954 115588933 -30000355 - L2 LINE L2 -1128 2186 1224 825 256 56 4 chr10 115590640 115590890 -29998398 + L1MA9 LINE L1 6012 6274 -38 4071 142 8 68 chr10 115591425 115592308 -29996980 + L1MA4A LINE L1 5293 6122 -181 235 163 62 138 chr10 115592311 115592391 -29996897 + L1MA4A LINE L1 6188 6261 -42 825 229 26 16 chr10 115592557 115592749 -29996539 - L1ME3 LINE L1 -79 6083 5890 278 177 48 32 chr10 115592763 115592825 -29996463 + MER112 DNA MER1_type 197 259 -1 278 224 47 59 chr10 115592833 115592918 -29996370 - MER5A DNA MER1_type -20 169 86 507 321 183 18 chr10 115593819 115594218 -29995070 - L2 LINE L2 -1 3312 2848 252 213 0 0 chr10 115596375 115596422 -29992866 - MIR SINE MIR 0 262 216 391 322 26 33 chr10 115597166 115597318 -29991970 - MIR3 SINE MIR -14 194 44 214 189 0 0 chr10 115598221 115598258 -29991030 + MIR SINE MIR 217 253 -9 212 250 21 0 chr10 115599636 115599684 -29989604 - MIR3 SINE MIR -11 197 149 498 298 102 34 chr10 115600070 115600275 -29989013 - MIR SINE MIR -25 237 19 777 83 0 68 chr10 115601467 115601600 -29987688 - AluY SINE Alu -185 126 3 215 321 141 56 chr10 115601646 115601895 -29987393 + L2 LINE L2 2804 3073 -199 183 356 11 22 chr10 115601988 115602078 -29987210 + L2 LINE L2 3225 3313 0 531 292 76 38 chr10 115602695 115602983 -29986305 + MER102b DNA MER1_type 34 332 -9 365 358 48 5 chr10 115603722 115603909 -29985379 + L3 LINE CR1 1276 1470 -107 2264 98 0 0 chr10 115603947 115604233 -29985055 - AluSx SINE Alu -16 296 11 645 193 7 15 chr10 115604243 115604378 -29984910 + L1PB4 LINE L1 6020 6153 -3 23 0 0 0 chr10 115604547 115604570 -29984718 + AT_rich Low_complexity Low_complexity 1 23 0 250 190 51 89 chr10 115605030 115605109 -29984179 - LTR67 LTR ERVL -11 546 471 2224 125 0 0 chr10 115607728 115608033 -29981255 + AluSx SINE Alu 1 305 -7 3396 24 5 0 chr10 115608360 115608734 -29980554 + L1PA5 LINE L1 5777 6152 -2 26 0 0 0 chr10 115608742 115608768 -29980520 + AT_rich Low_complexity Low_complexity 1 26 0 2187 162 39 17 chr10 115609413 115609826 -29979462 - L1MB3 LINE L1 -3 6180 5759 249 274 0 42 chr10 115609842 115609937 -29979351 - L1MC4 LINE L1 -1338 6704 6614 236 152 0 22 chr10 115609911 115609957 -29979331 - L1MC4 LINE L1 -1339 6703 6659 * 407 238 48 0 chr10 115610019 115610124 -29979164 - MER94 DNA DNA -15 119 10 706 290 44 8 chr10 115611238 115611486 -29977802 + LTR16A1 LTR ERVL 201 457 0 2197 149 80 20 chr10 115611568 115611970 -29977318 + MSTB LTR MaLR 1 426 0 1012 197 9 27 chr10 115612026 115612249 -29977039 + MER20 DNA MER1_type 1 219 0 2448 62 3 0 chr10 115612425 115612714 -29976574 + AluSp SINE Alu 1 290 -23 232 276 19 9 chr10 115613030 115613135 -29976153 + (TA)n Simple_repeat Simple_repeat 2 107 0 417 292 43 56 chr10 115614829 115614848 -29974440 + MIR SINE MIR 13 31 -231 7393 39 5 3 chr10 115614848 115615904 -29973384 + L1PA5 LINE L1 5095 6152 -2 417 292 43 56 chr10 115615904 115616045 -29973243 + MIR SINE MIR 31 171 -91 437 214 19 0 chr10 115616046 115616149 -29973139 + MLT1H1 LTR MaLR 1 105 -450 1147 191 95 0 chr10 115616345 115616597 -29972691 + MSTA LTR MaLR 1 276 -152 2141 106 0 0 chr10 115616716 115617023 -29972265 - AluSx SINE Alu 0 308 2 2151 110 0 0 chr10 115618605 115618916 -29970372 - AluSg SINE Alu 0 311 1 269 25 75 0 chr10 115619017 115619057 -29970231 + (CATATA)n Simple_repeat Simple_repeat 6 48 0 307 293 136 14 chr10 115619205 115619352 -29969936 - MIR SINE MIR -62 200 36 225 0 0 0 chr10 115619845 115619870 -29969418 + (A)n Simple_repeat Simple_repeat 1 25 0 3470 287 81 48 chr10 115620685 115623002 -29966286 + HAL1 LINE L1 52 2448 -59 678 266 110 46 chr10 115623002 115623419 -29965869 - MLT1J1 LTR MaLR 0 446 3 3470 287 81 48 chr10 115623419 115623458 -29965830 + HAL1 LINE L1 2448 2484 -23 264 170 57 7 chr10 115623806 115623947 -29965341 + (TA)n Simple_repeat Simple_repeat 1 148 0 211 185 43 22 chr10 115623948 115624040 -29965248 + (TTATA)n Simple_repeat Simple_repeat 1 94 0 333 309 137 14 chr10 115624712 115624851 -29964437 - MIR SINE MIR -85 177 22 236 333 56 32 chr10 115625189 115625315 -29963973 + L2 LINE L2 3184 3312 -1 249 330 30 48 chr10 115626765 115626953 -29962335 - MIR SINE MIR -41 221 37 40937 32 21 1 chr10 115626987 115633018 -29956270 - L1HS LINE L1 0 6155 1 337 143 82 112 chr10 115633997 115634095 -29955193 - MIR SINE MIR 0 262 168 548 80 0 23 chr10 115634200 115634288 -29955000 - AluY SINE Alu 0 312 227 1036 83 0 8 chr10 115634304 115634437 -29954851 - AluY SINE Alu -179 132 1 199 274 0 0 chr10 115634437 115634488 -29954800 + L2 LINE L2 3263 3313 0 634 264 25 87 chr10 115634553 115634718 -29954570 + MARNA DNA Mariner 207 340 -246 1015 181 17 73 chr10 115634718 115634950 -29954338 - MER20 DNA MER1_type 0 219 1 634 264 25 87 chr10 115634950 115635140 -29954148 + MARNA DNA Mariner 340 540 -46 479 315 97 33 chr10 115636209 115636631 -29952657 + LTR33 LTR ERVL 21 469 -52 474 278 90 8 chr10 115636849 115636982 -29952306 + MIR SINE MIR 21 164 -98 2292 177 21 16 chr10 115637002 115637086 -29952202 - MSTB LTR MaLR 0 426 344 1694 164 29 52 chr10 115637086 115637470 -29951818 + THE1C LTR MaLR 1 375 0 2292 177 21 16 chr10 115637470 115637809 -29951479 - MSTB LTR MaLR -82 344 1 1893 160 13 49 chr10 115637809 115638197 -29951091 - MLT1B LTR MaLR -16 374 1 790 266 139 40 chr10 115638285 115638364 -29950924 - MLT1I LTR MaLR -54 355 285 2471 102 10 31 chr10 115638364 115638747 -29950541 - THE1C LTR MaLR 0 375 1 790 266 139 40 chr10 115638747 115638990 -29950298 - MLT1I LTR MaLR -124 285 1 269 331 70 14 chr10 115638991 115639133 -29950155 - MIR SINE MIR -108 154 5 246 248 35 0 chr10 115639347 115639460 -29949828 + CT-rich Low_complexity Low_complexity 3 119 0 1828 174 90 12 chr10 115640458 115640871 -29948417 + L1MB7 LINE L1 5652 6096 -88 1324 178 35 0 chr10 115640873 115641131 -29948157 + L1MD1 LINE L1 5976 6242 0 28 0 0 0 chr10 115641187 115641215 -29948073 + AT_rich Low_complexity Low_complexity 1 28 0 391 257 71 14 chr10 115641739 115641879 -29947409 + LTR16C LTR ERVL 335 482 -9 310 246 20 84 chr10 115642180 115642383 -29946905 + L1ME LINE L1 5563 5752 -369 23 0 0 0 chr10 115642504 115642527 -29946761 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr10 115642824 115642845 -29946443 + AT_rich Low_complexity Low_complexity 1 21 0 824 259 132 8 chr10 115643218 115643469 -29945819 - AluSx SINE Alu -30 282 1 847 129 7 0 chr10 115643494 115643633 -29945655 + L1MA3 LINE L1 6166 6305 0 481 303 117 0 chr10 115644329 115644491 -29944797 + MIR3 SINE MIR 15 195 -13 219 69 0 0 chr10 115644549 115644578 -29944710 + (CA)n Simple_repeat Simple_repeat 2 30 0 457 282 117 0 chr10 115644838 115645001 -29944287 + MIR SINE MIR 37 218 -44 328 301 100 38 chr10 115645077 115645316 -29943972 - L2 LINE L2 -922 2392 2139 1598 194 39 19 chr10 115645348 115645493 -29943795 - L1MA9 LINE L1 0 6312 6171 402 21 0 0 chr10 115645493 115645540 -29943748 + (TG)n Simple_repeat Simple_repeat 2 48 0 2127 163 48 17 chr10 115645540 115645952 -29943336 - MSTA LTR MaLR -3 425 1 222 118 0 0 chr10 115645961 115645995 -29943293 + (TATG)n Simple_repeat Simple_repeat 1 34 0 1598 194 39 19 chr10 115645995 115646251 -29943037 - L1MA9 LINE L1 -148 6164 5892 484 322 99 22 chr10 115646284 115646598 -29942690 - L2 LINE L2 -1220 2094 1757 180 111 0 0 chr10 115647093 115647120 -29942168 + (TG)n Simple_repeat Simple_repeat 1 27 0 264 30 0 0 chr10 115648200 115648233 -29941055 + (A)n Simple_repeat Simple_repeat 1 33 0 2114 95 7 24 chr10 115648403 115648698 -29940590 + AluSc SINE Alu 1 290 -19 744 274 55 5 chr10 115648952 115649171 -29940117 + MIR SINE MIR 5 234 -28 806 305 119 25 chr10 115649407 115650067 -29939221 - L2 LINE L2 -88 3225 2500 180 222 63 48 chr10 115651291 115651354 -29937934 + L3 LINE CR1 1262 1325 -252 254 229 71 0 chr10 115651369 115651439 -29937849 - MLT1K LTR MaLR -358 230 156 2070 44 0 0 chr10 115651867 115652116 -29937172 + L1PA6 LINE L1 5904 6152 -2 323 303 121 35 chr10 115652332 115652530 -29936758 - MIR SINE MIR 0 262 48 230 207 0 35 chr10 115652672 115652794 -29936494 + CT-rich Low_complexity Low_complexity 1 117 0 463 260 71 59 chr10 115652842 115653096 -29936192 + MIR SINE MIR 6 262 0 545 328 39 27 chr10 115654569 115654828 -29934460 + MIR SINE MIR 1 262 0 21 36 0 0 chr10 115655017 115655045 -29934243 + AT_rich Low_complexity Low_complexity 1 28 0 507 216 0 0 chr10 115657487 115657603 -29931685 + (TA)n Simple_repeat Simple_repeat 2 117 0 396 40 0 0 chr10 115658211 115658261 -29931027 + (TG)n Simple_repeat Simple_repeat 1 50 0 233 139 0 0 chr10 115659901 115659937 -29929351 + L3 LINE CR1 1538 1573 -4 597 271 5 53 chr10 115660962 115661150 -29928138 - MER5A DNA MER1_type 0 189 11 1814 149 0 0 chr10 115661213 115661482 -29927806 + AluJb SINE Alu 35 303 -9 6039 84 12 28 chr10 115661569 115662343 -29926945 - L1PA13 LINE L1 0 6163 5417 2364 90 3 13 chr10 115662343 115662655 -29926633 - AluSx SINE Alu -3 309 1 6039 84 12 28 chr10 115662655 115663313 -29925975 - L1PA13 LINE L1 -746 5417 4750 318 295 58 89 chr10 115663906 115664096 -29925192 + MIR3 SINE MIR 18 201 -7 347 241 9 45 chr10 115664345 115664457 -29924831 - MER103 DNA DNA -24 142 35 7220 165 28 25 chr10 115665095 115666521 -29922767 + L1P LINE L1 11 1441 -4705 8275 60 1 6 chr10 115666527 115668383 -29920905 + L1PA6 LINE L1 4295 6151 -3 8378 174 34 17 chr10 115670103 115671487 -29917801 - L1PBa LINE L1 -1789 5073 3715 2315 86 3 3 chr10 115671487 115671778 -29917510 - AluSp SINE Alu -22 291 1 8378 174 34 17 chr10 115671778 115673254 -29916034 - L1PBa LINE L1 -3147 3715 1933 2152 119 0 19 chr10 115673254 115673565 -29915723 - AluSc SINE Alu -4 305 1 8378 174 34 17 chr10 115673565 115674422 -29914866 - L1PBa LINE L1 -4929 1933 1092 3562 155 79 15 chr10 115674427 115675148 -29914140 - L1PBa LINE L1 -5876 987 221 2174 112 7 0 chr10 115675438 115675732 -29913556 + AluSq SINE Alu 9 304 -9 264 267 30 0 chr10 115676674 115676775 -29912513 + (TA)n Simple_repeat Simple_repeat 2 105 0 461 263 144 34 chr10 115677281 115677517 -29911771 - MIR SINE MIR 0 262 1 291 306 41 25 chr10 115677658 115677779 -29911509 + L2 LINE L2 3187 3309 -4 325 348 52 83 chr10 115678441 115678766 -29910522 - L2 LINE L2 0 3272 2958 325 377 69 17 chr10 115678809 115679098 -29910190 - L2 LINE L2 -424 2890 2587 2770 9 0 13 chr10 115681878 115682193 -29907095 + AluYa5 SINE Alu 1 311 0 26 50 0 0 chr10 115682982 115683022 -29906266 + AT_rich Low_complexity Low_complexity 1 40 0 584 154 0 8 chr10 115683058 115683175 -29906113 - L1MB7 LINE L1 -7 6177 6062 731 291 75 48 chr10 115683327 115683857 -29905431 - L2 LINE L2 -206 3107 2561 201 289 24 42 chr10 115683973 115684139 -29905149 + A-rich Low_complexity Low_complexity 3 165 0 1343 93 0 28 chr10 115684206 115684420 -29904868 + AluY SINE Alu 104 311 0 21 36 0 0 chr10 115684454 115684482 -29904806 + AT_rich Low_complexity Low_complexity 1 28 0 5440 162 46 28 chr10 115684894 115686069 -29903219 - L1MA9 LINE L1 -1 6311 5072 1994 145 3 13 chr10 115686069 115686379 -29902909 - AluSx SINE Alu -5 307 1 5440 162 46 28 chr10 115686379 115687443 -29901845 - L1MA9 LINE L1 -1240 5072 4029 198 288 0 15 chr10 115687473 115687539 -29901749 - L2 LINE L2 -73 3240 3176 400 290 23 8 chr10 115687568 115687699 -29901589 - MIR SINE MIR -1 261 129 2209 125 13 0 chr10 115687841 115688146 -29901142 + AluSq SINE Alu 1 309 -4 297 350 0 42 chr10 115688519 115688662 -29900626 - MIR3 SINE MIR -65 143 7 1011 318 72 29 chr10 115688702 115689251 -29900037 - L2 LINE L2 -4 3309 2739 216 0 0 0 chr10 115690618 115690642 -29898646 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 218 374 8 61 chr10 115691660 115691906 -29897382 - L2 LINE L2 -527 2787 2555 2185 110 3 0 chr10 115692341 115692631 -29896657 - AluSg SINE Alu -19 291 1 843 314 57 18 chr10 115692768 115693157 -29896131 - LTR16A LTR ERVL -12 438 35 408 291 75 8 chr10 115693191 115693325 -29895963 + MIR SINE MIR 110 252 -10 923 174 164 0 chr10 115693584 115693785 -29895503 + Tigger7 DNA MER2_type 1 234 -2253 456 151 0 0 chr10 115693786 115693859 -29895429 + Tigger7 DNA MER2_type 2482 2554 -33 319 325 16 0 chr10 115694228 115694351 -29894937 + MIR SINE MIR 136 260 -2 261 256 100 22 chr10 115695664 115695754 -29893534 - MER97b DNA MER1_type? -1 1052 956 293 148 33 0 chr10 115695830 115695891 -29893397 + (CATA)n Simple_repeat Simple_repeat 2 64 0 336 217 104 9 chr10 115696401 115696507 -29892781 - MER97b DNA MER1_type? -452 601 486 2399 123 0 62 chr10 115696723 115697146 -29892142 - MER1A DNA MER1_type -98 431 35 198 0 0 0 chr10 115698590 115698612 -29890676 + (TA)n Simple_repeat Simple_repeat 2 23 0 764 259 47 99 chr10 115698664 115699089 -29890199 + MLT1I LTR MaLR 7 409 0 323 260 151 72 chr10 115699468 115699733 -29889555 - MLT1J LTR MaLR -2 509 224 195 348 8 42 chr10 115700273 115700391 -29888897 + MIR SINE MIR 13 126 -136 208 81 54 0 chr10 115701174 115701211 -29888077 + (CA)n Simple_repeat Simple_repeat 2 40 0 445 246 138 7 chr10 115701879 115702017 -29887271 - L2 LINE L2 -706 2608 2453 29 47 0 0 chr10 115702168 115702211 -29887077 + AT_rich Low_complexity Low_complexity 1 43 0 410 321 36 0 chr10 115703168 115703280 -29886008 + MIR SINE MIR 31 146 -116 1703 215 25 61 chr10 115704063 115704584 -29884704 - MLT1D LTR MaLR -3 502 1 186 212 0 76 chr10 115704609 115704675 -29884613 - L2 LINE L2 -1621 1693 1633 335 371 91 33 chr10 115704911 115705186 -29884102 + HAL1 LINE L1 327 617 -1890 248 234 129 24 chr10 115705331 115705455 -29883833 + HAL1 LINE L1 792 928 -1579 590 192 26 166 chr10 115705501 115705730 -29883558 + L1MA6 LINE L1 6095 6300 0 23290 116 13 20 chr10 115705730 115710197 -29879091 - L1P3 LINE L1 -1561 4900 433 4845 94 28 1 chr10 115710201 115711064 -29878224 + L1P3 LINE L1 4910 5793 -694 1882 158 0 14 chr10 115711075 115711372 -29877916 + AluSc SINE Alu 1 293 -16 26 0 0 0 chr10 115711581 115711607 -29877681 + AT_rich Low_complexity Low_complexity 1 26 0 7438 38 0 1 chr10 115711607 115713009 -29876279 - L1PA5 LINE L1 -11 6143 4743 5579 45 10 0 chr10 115713351 115714039 -29875249 + L1PA8 LINE L1 5476 6170 -2 2314 82 0 10 chr10 115714039 115714345 -29874943 + AluY SINE Alu 1 303 -8 498 281 55 28 chr10 115714460 115714541 -29874747 + HAL1 LINE L1 1082 1159 -1348 765 265 105 46 chr10 115714541 115714823 -29874465 - MLT1D LTR MaLR -2 503 180 1947 152 7 7 chr10 115714823 115715125 -29874163 - AluSx SINE Alu -10 302 1 765 265 105 46 chr10 115715125 115715317 -29873971 - MLT1D LTR MaLR -325 180 1 498 281 55 28 chr10 115715317 115715488 -29873800 + HAL1 LINE L1 1159 1341 -1166 553 287 34 100 chr10 115715493 115715932 -29873356 + L1MC3 LINE L1 21 430 -5996 9180 224 73 24 chr10 115715953 115718325 -29870963 + L1MC3 LINE L1 4056 6694 -1371 2071 120 0 13 chr10 115718325 115718625 -29870663 + AluSc SINE Alu 6 301 -8 9180 224 73 24 chr10 115718625 115720061 -29869227 + L1MC3 LINE L1 6694 8057 -8 236 188 62 0 chr10 115720480 115720544 -29868744 + MER103 DNA DNA 98 165 -1 216 211 0 0 chr10 115720767 115720805 -29868483 + polypurine Low_complexity Low_complexity 1 38 0 476 72 14 0 chr10 115720913 115720982 -29868306 + (TTCC)n Simple_repeat Simple_repeat 3 72 0 1012 181 32 44 chr10 115720990 115721238 -29868050 - AluJo SINE Alu -4 308 64 190 316 21 21 chr10 115721634 115721729 -29867559 - MIR SINE MIR -6 256 162 196 348 142 13 chr10 115721901 115722054 -29867234 - L3b LINE CR1 -51 1532 1360 234 338 137 14 chr10 115722054 115722193 -29867095 - MER5A DNA MER1_type 0 189 34 359 343 10 0 chr10 115723056 115723158 -29866130 + MER5A DNA MER1_type 4 106 -83 251 234 117 32 chr10 115724131 115724225 -29865063 + MER5B DNA MER1_type 57 158 -20 410 305 106 0 chr10 115724337 115724488 -29864800 + L3 LINE CR1 1203 1369 -208 239 359 82 24 chr10 115725256 115725415 -29863873 + L3 LINE CR1 1370 1538 -39 231 354 61 0 chr10 115725415 115725514 -29863774 - MER5A DNA MER1_type 0 189 85 2193 89 0 7 chr10 115726578 115726869 -29862419 - AluY SINE Alu -22 289 1 2145 137 0 6 chr10 115727217 115727531 -29861757 + AluSx SINE Alu 1 312 0 198 280 107 40 chr10 115727909 115727984 -29861304 - MIR SINE MIR -155 107 28 * 278 336 47 20 chr10 115727946 115728095 -29861193 + MIR SINE MIR 92 244 -18 757 277 102 25 chr10 115728236 115728521 -29860767 - MLT1I LTR MaLR -2 407 101 421 325 61 12 chr10 115728640 115728803 -29860485 - MIR SINE MIR -52 210 40 417 289 103 20 chr10 115729126 115729330 -29859958 - MIR SINE MIR -32 230 10 3238 186 9 13 chr10 115729539 115730329 -29858959 + L1MA9 LINE L1 5126 5914 -398 13968 138 14 56 chr10 115730354 115731143 -29858145 + Tigger1 DNA MER2_type 26 847 -1571 1013 111 47 23 chr10 115731143 115731315 -29857973 - L1PA13 LINE L1 -4 6159 5984 13968 138 14 56 chr10 115731315 115733024 -29856264 + Tigger1 DNA MER2_type 847 2418 0 333 193 0 118 chr10 115733098 115733217 -29856071 + L1MA9 LINE L1 6167 6271 -41 1845 143 14 3 chr10 115733461 115733748 -29855540 + AluJb SINE Alu 4 293 -19 355 282 133 21 chr10 115734615 115734849 -29854439 + MIR SINE MIR 3 262 0 413 319 48 52 chr10 115735697 115735948 -29853340 + MIR SINE MIR 11 260 -2 1200 173 8 0 chr10 115736187 115736430 -29852858 - L1MA4 LINE L1 0 6300 6056 1257 223 58 45 chr10 115737051 115737433 -29851855 + MLT1B LTR MaLR 4 390 0 289 229 125 68 chr10 115738613 115738805 -29850483 - L1ME3 LINE L1 -2 6440 6238 372 94 0 0 chr10 115738815 115738868 -29850420 + (TTCC)n Simple_repeat Simple_repeat 4 56 0 2031 118 4 0 chr10 115738868 115739140 -29850148 - AluSc SINE Alu -36 273 1 1757 266 65 12 chr10 115739143 115739901 -29849387 - L1ME3 LINE L1 -207 6235 5442 529 274 135 47 chr10 115739940 115740385 -29848903 - L1ME3 LINE L1 -3652 2774 2370 2292 86 7 0 chr10 115740385 115740676 -29848612 + AluSg SINE Alu 1 293 -17 529 274 135 47 chr10 115740676 115741166 -29848122 - L1ME3 LINE L1 -4056 2370 1805 526 308 88 46 chr10 115741411 115741771 -29847517 - L1ME3 LINE L1 -4934 1482 985 2134 125 0 3 chr10 115741771 115742074 -29847214 - AluSx SINE Alu -8 304 3 526 308 88 46 chr10 115742074 115742257 -29847031 - L1ME3 LINE L1 -5431 985 811 232 309 55 0 chr10 115742973 115743083 -29846205 - L1ME3 LINE L1 -5943 473 358 861 256 96 22 chr10 115743150 115743505 -29845783 - MER76 LTR ERV -66 622 242 338 100 0 67 chr10 115743505 115743579 -29845709 - MLT2A1 LTR ERVL 0 444 390 408 106 35 49 chr10 115743581 115743723 -29845565 + (TA)n Simple_repeat Simple_repeat 2 141 0 3318 59 0 0 chr10 115743723 115744127 -29845161 - MLT2A1 LTR ERVL -40 404 1 624 186 70 39 chr10 115744144 115744300 -29844988 - MER76 LTR ERV -510 178 18 226 204 48 0 chr10 115744597 115744700 -29844588 + (TA)n Simple_repeat Simple_repeat 2 109 0 269 212 23 45 chr10 115746573 115746705 -29842583 - L1ME3A LINE L1 -14 6156 6028 809 253 80 33 chr10 115746718 115747081 -29842207 - L1ME3A LINE L1 -232 5938 5559 189 107 0 0 chr10 115747185 115747213 -29842075 + (TA)n Simple_repeat Simple_repeat 1 28 0 603 51 100 0 chr10 115747302 115747583 -29841705 + (TA)n Simple_repeat Simple_repeat 1 308 0 232 178 0 0 chr10 115747644 115747689 -29841599 + (TA)n Simple_repeat Simple_repeat 1 45 0 1046 304 95 17 chr10 115747713 115748555 -29840733 - L1ME3A LINE L1 -586 5576 4665 529 116 63 24 chr10 115748725 115749020 -29840268 + (TA)n Simple_repeat Simple_repeat 1 306 0 1866 277 74 34 chr10 115749044 115750182 -29839106 - L1ME LINE L1 -586 5576 4390 606 318 43 13 chr10 115750335 115750568 -29838720 + MIR SINE MIR 23 262 0 251 258 0 0 chr10 115750570 115750632 -29838656 + (ATG)n Simple_repeat Simple_repeat 2 63 0 208 227 57 11 chr10 115751214 115751302 -29837986 + (CCGGG)n Simple_repeat Simple_repeat 2 93 0 * 259 253 36 30 chr10 115751239 115751405 -29837883 + C-rich Low_complexity Low_complexity 5 171 0 70 73 0 0 chr10 115751409 115751491 -29837797 + GC_rich Low_complexity Low_complexity 1 82 0 5840 172 17 4 chr10 115751752 115753447 -29835841 + L1PB1 LINE L1 4070 5800 -351 198 0 0 0 chr10 115753447 115753469 -29835819 + (TA)n Simple_repeat Simple_repeat 2 23 0 5840 172 17 4 chr10 115753469 115753822 -29835466 + L1PB1 LINE L1 5800 6147 -4 697 207 0 38 chr10 115753832 115754045 -29835243 + LTR23-int LTR ERV1 1785 1989 -3134 2428 244 50 45 chr10 115754045 115754637 -29834651 + L1MA8 LINE L1 2458 3045 -4520 1667 169 4 18 chr10 115754637 115754759 -29834529 + AluSx SINE Alu 6 128 -184 189 0 0 0 chr10 115754759 115754780 -29834508 + (CA)n Simple_repeat Simple_repeat 2 22 0 1667 169 4 18 chr10 115754780 115754936 -29834352 + AluSx SINE Alu 128 280 -32 182 37 37 0 chr10 115754940 115754967 -29834321 + (CAAA)n Simple_repeat Simple_repeat 3 30 0 2428 244 50 45 chr10 115754967 115755927 -29833361 + L1MA8 LINE L1 3047 4000 -3565 2166 141 62 41 chr10 115755927 115756346 -29832942 + MSTA LTR MaLR 1 428 0 8845 173 30 8 chr10 115756346 115757698 -29831590 + MSTA-int LTR MaLR 1 1396 -255 2185 131 0 0 chr10 115757698 115758004 -29831284 - AluSq SINE Alu -7 306 1 8845 173 30 8 chr10 115758004 115758266 -29831022 + MSTA-int LTR MaLR 1396 1651 0 2485 133 36 5 chr10 115758266 115758681 -29830607 + MSTA LTR MaLR 1 428 0 2428 244 50 45 chr10 115758681 115758764 -29830524 + L1MA8 LINE L1 3999 4106 -3459 330 130 0 0 chr10 115758764 115758810 -29830478 - Alu SINE Alu -255 46 1 1272 134 15 0 chr10 115758810 115759012 -29830276 + THE1-int LTR MaLR 1311 1515 -65 954 217 5 0 chr10 115759027 115759225 -29830063 + L1MA8 LINE L1 4117 4315 -3250 * 5804 165 61 19 chr10 115759223 115761401 -29827887 + L1MA8 LINE L1 5448 7705 -5 307 253 33 37 chr10 115761710 115761870 -29827418 + L1ME4a LINE L1 5691 5851 -270 236 196 0 0 chr10 115761950 115761996 -29827292 + L1ME4a LINE L1 5979 6024 -97 768 281 51 29 chr10 115762131 115762444 -29826844 + LTR16C LTR ERVL 158 477 -14 235 212 230 9 chr10 115762983 115763096 -29826192 + MIR SINE MIR 84 221 -41 203 254 16 16 chr10 115763806 115763869 -29825419 + (TCTG)n Simple_repeat Simple_repeat 4 66 0 2839 111 40 20 chr10 115765707 115766157 -29823131 - L1PA11 LINE L1 -4 6170 5712 222 203 27 14 chr10 115766540 115766614 -29822674 + (TTATA)n Simple_repeat Simple_repeat 2 76 0 1077 112 108 0 chr10 115766992 115767206 -29822082 - L1MA5A LINE L1 0 6297 6061 271 318 56 8 chr10 115768443 115768569 -29820719 - MLT1K LTR MaLR -87 501 370 500 271 86 14 chr10 115770646 115770786 -29818502 + L2 LINE L2 3160 3309 -4 1856 237 109 27 chr10 115771066 115771624 -29817664 + MLT2F LTR ERVL 2 605 -58 356 114 23 34 chr10 115771628 115771716 -29817572 + (TCTA)n Simple_repeat Simple_repeat 2 88 0 200 328 15 0 chr10 115772437 115772504 -29816784 + MIR SINE MIR 195 262 0 2057 88 3 14 chr10 115773682 115774005 -29815283 + AluY SINE Alu 1 320 0 592 143 50 36 chr10 115774010 115774150 -29815138 + L1MB4 LINE L1 6039 6180 0 898 236 98 6 chr10 115774334 115774672 -29814616 + MER57A LTR ERV1 71 403 0 256 345 0 27 chr10 115775782 115775892 -29813396 - L2 LINE L2 -18 3295 3189 23 0 0 0 chr10 115776751 115776774 -29812514 + AT_rich Low_complexity Low_complexity 1 23 0 26 0 0 0 chr10 115777106 115777132 -29812156 + AT_rich Low_complexity Low_complexity 1 26 0 324 0 0 0 chr10 115777205 115777241 -29812047 + (CA)n Simple_repeat Simple_repeat 2 37 0 214 345 134 8 chr10 115777581 115777700 -29811588 - MIR3 SINE MIR -73 135 2 480 310 101 24 chr10 115778288 115778585 -29810703 - LTR16A LTR ERVL -10 440 121 279 92 123 15 chr10 115779011 115779076 -29810212 + L1PA13 LINE L1 6078 6149 -14 1869 334 86 38 chr10 115779084 115780923 -29808365 - HERV16 LTR ERVL -550 5104 3156 1716 194 39 14 chr10 115780923 115781279 -29808009 + MLT1A1 LTR MaLR 1 365 0 1869 334 86 38 chr10 115781279 115781480 -29807808 - HERV16 LTR ERVL -2498 3156 2966 1511 314 81 25 chr10 115781478 115781555 -29807733 - HERV16 LTR ERVL -3451 1545 1474 * 1218 188 43 121 chr10 115781555 115781975 -29807313 + MLT1B LTR MaLR 4 390 0 1511 314 81 25 chr10 115781975 115783218 -29806070 - HERV16 LTR ERVL -3522 1474 135 195 42 0 0 chr10 115783229 115783253 -29806035 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 2177 125 0 0 chr10 115783256 115783544 -29805744 - AluSx SINE Alu -24 288 1 830 307 60 19 chr10 115783681 115784049 -29805239 - LTR16A LTR ERVL -12 438 56 396 299 75 8 chr10 115784104 115784238 -29805050 + MIR SINE MIR 110 252 -10 902 179 164 0 chr10 115784497 115784698 -29804590 + Tigger7 DNA MER2_type 1 234 -471 456 151 0 0 chr10 115784699 115784772 -29804516 + Tigger7 DNA MER2_type 2482 2554 -33 319 325 16 0 chr10 115785141 115785264 -29804024 + MIR SINE MIR 136 260 -2 503 173 87 8 chr10 115786045 115786172 -29803116 - MER97c DNA MER1_type? -489 601 465 1167 204 15 43 chr10 115786270 115786594 -29802694 - MER97a DNA MER1_type? -579 315 1 668 215 41 36 chr10 115787673 115787868 -29801420 + MLT1D LTR MaLR 1 196 -309 1098 156 121 0 chr10 115787868 115787984 -29801304 + L1MA9 LINE L1 6025 6126 -186 531 101 0 0 chr10 115787984 115788063 -29801225 + (CA)n Simple_repeat Simple_repeat 1 79 0 1098 156 121 0 chr10 115788063 115788203 -29801085 + L1MA9 LINE L1 6126 6312 0 545 237 119 20 chr10 115788216 115788469 -29800819 + MLT1D LTR MaLR 190 467 0 404 344 40 0 chr10 115788747 115788872 -29800416 - L2 LINE L2 -2 3311 3182 388 227 253 0 chr10 115788846 115789000 -29800288 - L2 LINE L2 -536 2778 2586 * 363 326 28 21 chr10 115789003 115789144 -29800144 - L2 LINE L2 -3140 174 33 1853 144 79 17 chr10 115790849 115791202 -29798086 - THE1C LTR MaLR 0 375 1 935 183 10 56 chr10 115792139 115792336 -29796952 + MER5A DNA MER1_type 1 188 -1 43 20 0 0 chr10 115793391 115793441 -29795847 + AT_rich Low_complexity Low_complexity 1 50 0 373 252 58 22 chr10 115795260 115795399 -29793889 + MIR SINE MIR 114 257 -5 381 287 8 49 chr10 115797495 115797617 -29791671 - MER5A DNA MER1_type -4 185 69 3559 194 4 7 chr10 115797677 115798418 -29790870 - L1 LINE L1 -2036 4110 3372 765 173 6 26 chr10 115798418 115798572 -29790716 + L1PB4 LINE L1 6004 6156 0 22 35 0 0 chr10 115799149 115799178 -29790110 + AT_rich Low_complexity Low_complexity 1 29 0 356 268 176 14 chr10 115799761 115799903 -29789385 - MER5A DNA MER1_type -5 184 20 180 0 0 0 chr10 115800038 115800058 -29789230 + (ATG)n Simple_repeat Simple_repeat 1 20 0 2169 100 0 0 chr10 115800229 115800552 -29788736 - AluSg SINE Alu 0 323 1 2283 122 0 0 chr10 115800709 115801020 -29788268 - AluY SINE Alu 0 311 1 1116 286 39 65 chr10 115802232 115802802 -29786486 - L2 LINE L2 -1 3312 2754 26 30 0 0 chr10 115804055 115804088 -29785200 + AT_rich Low_complexity Low_complexity 1 33 0 260 380 8 41 chr10 115804256 115804377 -29784911 + MIR SINE MIR 33 149 -59 421 248 80 18 chr10 115804464 115804577 -29784711 - MIR SINE MIR -109 153 34 722 299 67 38 chr10 115805439 115805780 -29783508 - LTR16A LTR ERVL -10 440 90 331 372 18 24 chr10 115806291 115806455 -29782833 + MER5A DNA MER1_type 26 188 -1 325 214 94 86 chr10 115806874 115806991 -29782297 + MER63 DNA MER1_type 7 750 -86 327 256 12 0 chr10 115806992 115807074 -29782214 + MER63 DNA MER1_type 976 1058 -2 989 201 5 0 chr10 115807109 115807303 -29781985 - L1MB1 LINE L1 -5 6163 5969 1141 183 24 0 chr10 115807418 115807626 -29781662 - MER58A DNA MER1_type -9 215 3 360 0 0 0 chr10 115808649 115808689 -29780599 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 2409 84 0 3 chr10 115809293 115809591 -29779697 + AluSx SINE Alu 1 297 -15 4578 237 182 9 chr10 115810214 115811782 -29777506 + L1MA4A LINE L1 1 1840 -5369 * 8073 168 18 11 chr10 115811755 115814450 -29774838 + L1MA4A LINE L1 4635 7359 -6 219 303 40 30 chr10 115814848 115814947 -29774341 + MIR3 SINE MIR 82 181 -27 22 0 0 0 chr10 115816539 115816561 -29772727 + AT_rich Low_complexity Low_complexity 1 22 0 261 346 10 10 chr10 115816662 115816763 -29772525 - MIR3 SINE MIR -27 181 81 508 313 16 21 chr10 115817928 115818189 -29771099 - L1ME LINE L1 -434 5736 5478 4110 163 39 16 chr10 115818203 115818718 -29770570 - L1MA9 LINE L1 0 6312 5770 279 54 0 0 chr10 115818718 115818755 -29770533 + (TG)n Simple_repeat Simple_repeat 2 38 0 4110 163 39 16 chr10 115818755 115819053 -29770235 - L1MA9 LINE L1 -542 5770 5480 465 250 9 61 chr10 115819053 115819281 -29770007 - L1M3e LINE L1 -6258 772 557 284 272 96 24 chr10 115819837 115819962 -29769326 + MLT1I LTR MaLR 250 383 -26 325 312 158 14 chr10 115820081 115820171 -29769117 - L1ME LINE L1 -944 5202 5126 240 35 0 0 chr10 115820171 115820200 -29769088 + (TG)n Simple_repeat Simple_repeat 1 29 0 325 312 158 14 chr10 115820200 115820324 -29768964 - L1ME LINE L1 -1020 5126 4957 1383 153 52 126 chr10 115820333 115820502 -29768786 - AluJb SINE Alu 0 302 167 228 43 65 0 chr10 115820502 115820548 -29768740 + T-rich Low_complexity Low_complexity 2 50 0 1383 153 52 126 chr10 115820548 115820704 -29768584 - AluJb SINE Alu -135 167 1 304 139 0 42 chr10 115820716 115820788 -29768500 + (TTTCC)n Simple_repeat Simple_repeat 5 73 0 206 284 103 58 chr10 115822055 115822210 -29767078 - L2 LINE L2 -167 3105 2944 240 170 0 0 chr10 115822212 115822259 -29767029 + U7 snRNA snRNA 2 48 -15 866 157 41 0 chr10 115822492 115822639 -29766649 + MLT1D LTR MaLR 1 153 -352 1190 192 45 16 chr10 115822688 115822933 -29766355 + MLT1D LTR MaLR 254 505 0 715 303 26 36 chr10 115823483 115823701 -29765587 + MIR SINE MIR 14 225 -37 491 93 53 0 chr10 115823701 115823776 -29765512 - MADE1 DNA Mariner -1 79 1 715 303 26 36 chr10 115823776 115823813 -29765475 + MIR SINE MIR 225 261 -1 346 267 31 43 chr10 115824605 115824766 -29764522 + L1ME4a LINE L1 5788 5946 -175 2130 104 7 3 chr10 115825028 115825317 -29763971 - AluSq SINE Alu -13 300 11 193 344 0 33 chr10 115826489 115826579 -29762709 - L2 LINE L2 -77 3195 3109 205 167 0 0 chr10 115826656 115826692 -29762596 + (CAT)n Simple_repeat Simple_repeat 3 38 0 272 237 0 17 chr10 115827507 115827566 -29761722 - MIR SINE MIR -114 94 37 21 0 0 0 chr10 115828935 115828956 -29760332 + AT_rich Low_complexity Low_complexity 1 21 0 844 223 126 0 chr10 115830410 115830679 -29758609 - L1MC3 LINE L1 -7 7778 7476 * 10578 161 22 130 chr10 115830674 115832278 -29757010 - L1M1 LINE L1 -5326 2239 841 726 192 130 0 chr10 115832278 115832424 -29756864 + Tigger7 DNA MER2_type 3 167 -2320 10578 161 22 130 chr10 115832424 115833178 -29756110 - L1M1 LINE L1 -6724 841 7 3034 241 26 30 chr10 115833185 115834164 -29755124 - L1 LINE L1 -3380 3828 2846 239 0 32 0 chr10 115834164 115834195 -29755093 + (TTG)n Simple_repeat Simple_repeat 2 33 0 1749 174 32 0 chr10 115834197 115834479 -29754809 - AluSx SINE Alu -21 291 1 3034 241 26 30 chr10 115834479 115834931 -29754357 - L1 LINE L1 -4363 2845 2400 2375 250 17 10 chr10 115834931 115835532 -29753756 + L1M2c LINE L1 1382 1986 -4803 377 286 45 69 chr10 115835583 115835815 -29753473 - L1 LINE L1 -6112 1097 428 2037 119 17 3 chr10 115835842 115836137 -29753151 - THE1C LTR MaLR -76 299 1 9629 123 52 6 chr10 115836139 115837648 -29751640 - THE1C-int LTR MaLR -2 1578 1 2052 142 26 40 chr10 115837648 115838028 -29751260 - THE1C LTR MaLR 0 375 1 310 314 9 19 chr10 115838028 115838126 -29751162 - L1M2c LINE L1 -6351 438 340 3468 58 4 9 chr10 115838126 115838576 -29750712 - LTR7 LTR ERV1 -2 448 1 14127 81 4 9 chr10 115838582 115840530 -29748758 - HERVH LTR ERV1 -6 7707 5769 1290 105 16 0 chr10 115840516 115840706 -29748582 - HERVH LTR ERV1 -3033 4680 4488 * 3320 111 4 6 chr10 115840708 115841211 -29748077 - HERVH LTR ERV1 -3720 3993 3492 980 102 27 0 chr10 115841201 115841348 -29747940 - HERVH LTR ERV1 -4423 3290 3140 * 14084 121 14 25 chr10 115841334 115843738 -29745550 - HERVH LTR ERV1 -4721 2992 297 22 0 0 0 chr10 115843859 115843881 -29745407 + AT_rich Low_complexity Low_complexity 1 22 0 2299 103 0 0 chr10 115844239 115844550 -29744738 + AluSx SINE Alu 1 311 -1 210 279 15 0 chr10 115845203 115845271 -29744017 + (TTTA)n Simple_repeat Simple_repeat 1 69 0 3721 137 34 32 chr10 115845423 115846132 -29743156 - MER67C LTR ERV1 0 710 1 255 261 297 7 chr10 115846279 115846417 -29742871 + MER5A DNA MER1_type 11 188 -1 261 0 0 0 chr10 115846491 115846527 -29742761 + L1PA3 LINE L1 6117 6152 -3 1223 220 17 121 chr10 115846561 115847198 -29742090 - L1M4 LINE L1 -841 5305 4735 8202 241 59 19 chr10 115847211 115850043 -29739245 - L1M4 LINE L1 -869 5277 2334 292 236 9 9 chr10 115850065 115850171 -29739117 + (TA)n Simple_repeat Simple_repeat 2 107 0 2055 207 46 14 chr10 115850171 115850606 -29738682 - MLT2B2 LTR ERVL -64 451 3 997 162 0 0 chr10 115850607 115850774 -29738514 - ERVL-B2 LTR ERVL -6 5758 5592 3249 198 85 158 chr10 115850931 115852429 -29736859 + L1MCa LINE L1 7 1196 -4849 327 253 36 0 chr10 115852432 115852515 -29736773 - L1MC4 LINE L1 -1339 6703 6618 279 191 22 11 chr10 115852533 115852622 -29736666 + (CATATA)n Simple_repeat Simple_repeat 3 92 0 270 268 0 41 chr10 115852622 115852719 -29736569 - L1MC4 LINE L1 -1336 6706 6614 6107 254 77 25 chr10 115852750 115855944 -29733344 + L1MCa LINE L1 1559 5016 -1548 334 246 91 77 chr10 115855981 115856254 -29733034 - L1MEd LINE L1 -2953 3988 1782 1592 276 91 39 chr10 115856380 115857097 -29732191 - L1MEd LINE L1 -4892 1531 778 182 338 50 0 chr10 115859228 115859308 -29729980 - MIR SINE MIR -150 112 29 564 86 0 12 chr10 115859917 115859998 -29729290 - MADE1 DNA Mariner 0 80 1 440 297 40 23 chr10 115860015 115860190 -29729098 - MIR SINE MIR -75 187 10 472 301 0 9 chr10 115860295 115860450 -29728838 - MIR SINE MIR -63 145 4 1733 193 22 14 chr10 115861276 115861638 -29727650 - MLT1A1 LTR MaLR 0 365 1 284 298 262 7 chr10 115861726 115862005 -29727283 - LTR33A LTR ERVL 0 523 174 194 313 15 30 chr10 115862199 115862266 -29727022 - MIR SINE MIR -127 81 16 1896 169 36 25 chr10 115862575 115862935 -29726353 + THE1B LTR MaLR 1 364 0 186 310 56 0 chr10 115864411 115864482 -29724806 - MIR3 SINE MIR -15 193 119 233 26 0 77 chr10 115864915 115864954 -29724334 + (A)n Simple_repeat Simple_repeat 1 36 0 2269 169 18 25 chr10 115865083 115865520 -29723768 - Tigger2a DNA MER2_type 0 434 1 480 352 45 45 chr10 115866962 115867297 -29721991 + L1M2c LINE L1 12 346 -6443 3296 71 2 9 chr10 115867297 115867748 -29721540 + LTR7 LTR ERV1 1 448 -2 485 101 25 13 chr10 115867752 115867831 -29721457 + HERVH LTR ERV1 3 82 -7631 778 194 19 12 chr10 115867960 115868120 -29721168 - AluSx SINE Alu -140 172 12 299 264 223 34 chr10 115868278 115868426 -29720862 - MER5A DNA MER1_type -2 187 12 498 305 67 43 chr10 115868860 115869070 -29720218 + LTR33 LTR ERVL 1 215 -306 473 282 115 6 chr10 115870421 115870595 -29718693 - MIR SINE MIR -11 251 59 262 238 83 12 chr10 115872161 115872245 -29717043 - MIR SINE MIR -125 137 48 234 0 0 0 chr10 115872307 115872333 -29716955 + (CA)n Simple_repeat Simple_repeat 2 27 0 3948 164 46 27 chr10 115872441 115872904 -29716384 - L1MA8 LINE L1 -33 6258 5772 3248 102 23 0 chr10 115872904 115873383 -29715905 - L1PA10 LINE L1 -1 6167 5678 3948 164 46 27 chr10 115873383 115873729 -29715559 - L1MA8 LINE L1 -519 5772 5434 338 366 61 0 chr10 115875679 115875810 -29713478 + L2 LINE L2 3129 3267 -5 315 323 61 72 chr10 115877888 115878167 -29711121 + LTR16C LTR ERVL 204 479 -12 817 137 0 38 chr10 115878324 115878507 -29710781 + (TTTC)n Simple_repeat Simple_repeat 2 177 0 289 214 36 24 chr10 115878507 115878591 -29710697 + CT-rich Low_complexity Low_complexity 5 89 0 198 302 0 0 chr10 115879693 115879736 -29709552 - L2 LINE L2 -32 3281 3239 185 386 94 16 chr10 115879761 115879888 -29709400 - MIR3 SINE MIR -63 145 9 1791 273 116 8 chr10 115880318 115881113 -29708175 + L1M4 LINE L1 4088 4968 -1178 286 227 124 0 chr10 115881239 115881336 -29707952 + L1M4 LINE L1 4963 5071 -1075 440 270 101 6 chr10 115881561 115881720 -29707568 + MIR SINE MIR 58 231 -31 722 264 63 47 chr10 115881816 115882070 -29707218 + MIR SINE MIR 5 262 0 249 290 75 0 chr10 115882414 115882507 -29706781 - LTR16A1 LTR ERVL -2 455 356 235 106 43 0 chr10 115882486 115882533 -29706755 + Alu SINE Alu 249 297 -2 * 245 273 26 0 chr10 115882551 115882628 -29706660 - LTR16A1 LTR ERVL -72 385 307 255 395 28 0 chr10 115882696 115882805 -29706483 + L2 LINE L2 3184 3295 -18 1540 192 14 11 chr10 115883101 115883387 -29705901 + AluSx SINE Alu 1 287 -25 205 205 0 0 chr10 115883472 115883511 -29705777 - MIR SINE MIR 0 262 224 2972 140 105 64 chr10 115883572 115884275 -29705013 - L1MA5 LINE L1 -10 6290 5547 228 338 132 15 chr10 115884300 115884436 -29704852 - MIR SINE MIR -71 191 40 265 346 10 2 chr10 115884544 115884666 -29704622 - MIR SINE MIR -68 140 19 238 297 27 14 chr10 115885343 115885417 -29703871 + CT-rich Low_complexity Low_complexity 4 78 0 243 396 19 13 chr10 115886319 115886473 -29702815 - MIR3 SINE MIR -5 203 49 316 321 42 42 chr10 115886585 115886775 -29702513 - MIR SINE MIR -64 198 9 21 0 0 0 chr10 115887552 115887573 -29701715 + AT_rich Low_complexity Low_complexity 1 21 0 5056 165 48 12 chr10 115888682 115889819 -29699469 + L1MA8 LINE L1 5112 6287 -4 206 382 0 0 chr10 115890107 115890175 -29699113 + L2 LINE L2 3230 3297 -16 252 268 0 14 chr10 115890178 115890249 -29699039 + A-rich Low_complexity Low_complexity 4 73 0 6403 142 20 26 chr10 115890423 115892350 -29696938 - L1PA10 LINE L1 -17 6151 4234 342 309 90 26 chr10 115892357 115892590 -29696698 - L1ME4a LINE L1 -9 6112 5865 494 290 182 37 chr10 115892605 115892753 -29696535 + L1ME LINE L1 2 127 -5943 1240 222 28 74 chr10 115892753 115893145 -29696143 - MLT1A2 LTR MaLR 0 374 1 494 290 182 37 chr10 115893145 115893513 -29695775 + L1ME LINE L1 127 593 -5477 772 276 65 8 chr10 115893519 115893780 -29695508 + MLT2F LTR ERVL 1 276 -387 368 293 131 5 chr10 115893832 115894021 -29695267 + MLT2F LTR ERVL 150 599 -64 181 229 66 82 chr10 115894029 115894090 -29695198 + MIR SINE MIR 125 184 -78 248 330 85 17 chr10 115894456 115894574 -29694714 + L2 LINE L2 3136 3261 -11 375 60 0 0 chr10 115895098 115895148 -29694140 + (TG)n Simple_repeat Simple_repeat 2 51 0 206 136 23 0 chr10 115896702 115896746 -29692542 + GA-rich Low_complexity Low_complexity 1 45 0 728 184 36 36 chr10 115896806 115896974 -29692314 + MER5A DNA MER1_type 1 168 -21 213 309 153 79 chr10 115896968 115897321 -29691967 - L3 LINE CR1 -242 1335 957 * 1830 182 14 22 chr10 115897388 115897757 -29691531 + MER47A DNA MER2_type 1 366 0 218 305 74 21 chr10 115898248 115898343 -29690945 + MIR SINE MIR 43 142 -66 208 26 0 77 chr10 115900127 115900166 -29689122 + (TTTTTG)n Simple_repeat Simple_repeat 1 36 0 247 340 10 0 chr10 115900392 115900489 -29688799 - MER117 DNA MER1_type -81 116 19 180 0 0 0 chr10 115900489 115900509 -29688779 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 218 288 136 42 chr10 115901121 115901239 -29688049 - L2 LINE L2 -5 3308 3180 225 174 22 0 chr10 115901414 115901460 -29687828 + L2 LINE L2 3267 3313 0 639 184 0 0 chr10 115901584 115901709 -29687579 - L1MA10 LINE L1 -1 6333 6209 288 119 60 0 chr10 115901854 115901921 -29687367 + (TCTA)n Simple_repeat Simple_repeat 2 72 0 275 113 0 32 chr10 115903109 115903171 -29686117 - L1MA7 LINE L1 -6 6285 6226 * 402 217 62 13 chr10 115903148 115903280 -29686008 - L1MA7 LINE L1 -197 6094 5975 227 349 62 0 chr10 115903855 115903984 -29685304 + MIR SINE MIR 60 196 -66 185 351 72 54 chr10 115904072 115904183 -29685105 + L2 LINE L2 3143 3255 -17 284 322 78 50 chr10 115905124 115905304 -29683984 - MIR3 SINE MIR -15 193 9 21 36 0 0 chr10 115905987 115906015 -29683273 + AT_rich Low_complexity Low_complexity 1 28 0 1484 210 13 16 chr10 115906058 115906368 -29682920 + AluJo SINE Alu 1 309 -3 2438 48 0 0 chr10 115906656 115906948 -29682340 - AluY SINE Alu -19 292 1 834 270 133 30 chr10 115908105 115908505 -29680783 + LTR33 LTR ERVL 3 443 -78 5813 152 13 16 chr10 115909599 115910749 -29678539 + Tigger3b DNA MER2_type 1 1231 0 264 296 22 59 chr10 115911243 115911378 -29677910 - MIR SINE MIR -84 178 49 710 218 241 68 chr10 115911437 115911777 -29677511 - MER57A LTR ERV1 -4 399 1 222 357 36 0 chr10 115911963 115912047 -29677241 - MER5A DNA MER1_type -47 142 56 1614 166 46 0 chr10 115912897 115913181 -29676107 + AluJb SINE Alu 16 312 0 2355 100 3 0 chr10 115913195 115913506 -29675782 + AluSp SINE Alu 1 312 -1 383 38 19 0 chr10 115914907 115914960 -29674328 + (TA)n Simple_repeat Simple_repeat 2 55 0 236 263 53 15 chr10 115915358 115915491 -29673797 + (TAGA)n Simple_repeat Simple_repeat 4 141 0 650 286 110 33 chr10 115915510 115915937 -29673351 + L1ME3 LINE L1 5492 5951 -211 1314 177 81 34 chr10 115915943 115916265 -29673023 + MER44D DNA MER2_type 1 607 -2 922 176 59 139 chr10 115916437 115916875 -29672413 - MER57A LTR ERV1 0 403 1 29 60 0 0 chr10 115916895 115916945 -29672343 + AT_rich Low_complexity Low_complexity 1 50 0 549 60 24 0 chr10 115917161 115917245 -29672043 + MER44D DNA MER2_type 536 621 -84 390 282 120 0 chr10 115917372 115917514 -29671774 + MIR SINE MIR 38 196 -66 22 0 0 0 chr10 115917529 115917551 -29671737 + AT_rich Low_complexity Low_complexity 1 22 0 330 281 135 25 chr10 115918045 115918409 -29670879 - L1M4c LINE L1 -3717 2927 2562 479 284 50 30 chr10 115918776 115919175 -29670113 - L1M4c LINE L1 -3997 2649 2276 1586 226 40 62 chr10 115919224 115919738 -29669550 - MLT1D LTR MaLR -8 547 1 782 257 61 34 chr10 115919775 115920102 -29669186 - L1M4c LINE L1 -4627 2019 1684 21 57 0 0 chr10 115920102 115920137 -29669151 + AT_rich Low_complexity Low_complexity 1 35 0 560 205 95 38 chr10 115920157 115920367 -29668921 - L1M4c LINE L1 -5218 1324 1103 336 232 30 0 chr10 115920353 115920452 -29668836 - L1M4c LINE L1 -6425 117 16 * 465 325 26 10 chr10 115923466 115923660 -29665628 + ERVL LTR ERVL 1520 1716 -4048 272 283 55 48 chr10 115923710 115923855 -29665433 + ERVL LTR ERVL 1738 1883 -3113 442 329 11 13 chr10 115923881 115924068 -29665220 + ERVL LTR ERVL 1943 2155 -2870 28 102 0 0 chr10 115924081 115924179 -29665109 + AT_rich Low_complexity Low_complexity 1 98 0 367 313 114 9 chr10 115924183 115924394 -29664894 - L1MEd LINE L1 -4306 2004 1772 1516 296 28 33 chr10 115924396 115924417 -29664871 - L1MEd LINE L1 -4576 1734 1714 6997 55 38 22 chr10 115924417 115925501 -29663787 - L1PA8 LINE L1 -5 6167 5080 1516 296 28 33 chr10 115925501 115926295 -29662993 - L1MEd LINE L1 -4596 1714 895 337 279 52 15 chr10 115926555 115926691 -29662597 - L1MEd LINE L1 -5855 264 124 400 264 47 0 chr10 115926702 115926808 -29662480 + ERVL LTR ERVL 2167 2277 -3487 392 329 38 29 chr10 115927041 115927281 -29662007 + ERVL LTR ERVL 2506 2747 -2249 633 391 47 28 chr10 115927580 115928272 -29661016 + ERVL LTR ERVL 3752 4472 -1182 3515 128 2 28 chr10 115928272 115928813 -29660475 + MER1A DNA MER1_type 1 527 0 633 391 47 28 chr10 115928813 115929178 -29660110 + ERVL LTR ERVL 4472 4829 -825 253 259 94 12 chr10 115929243 115929328 -29659960 + ERVL LTR ERVL 4907 4998 -766 3120 137 120 48 chr10 115929970 115930662 -29658626 + LTR48 LTR ERV1 1 742 -45 432 333 39 26 chr10 115930750 115930981 -29658307 + LTR16C LTR ERVL 256 489 -2 21 36 0 0 chr10 115934431 115934459 -29654829 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr10 115934964 115934986 -29654302 + AT_rich Low_complexity Low_complexity 1 22 0 24701 158 18 26 chr10 115936002 115942392 -29646896 + L1PA10 LINE L1 1 6479 -4 23 54 0 0 chr10 115942549 115942586 -29646702 + AT_rich Low_complexity Low_complexity 1 37 0 1647 161 197 11 chr10 115942592 115942953 -29646335 - MSTA LTR MaLR 0 428 1 1427 207 3 3 chr10 115943011 115943301 -29645987 + AluJo SINE Alu 3 292 -20 277 317 126 18 chr10 115944465 115944632 -29644656 + L2 LINE L2 3124 3308 -5 1737 149 0 34 chr10 115944791 115945086 -29644202 - AluSx SINE Alu -5 307 23 22 0 0 0 chr10 115945102 115945124 -29644164 + AT_rich Low_complexity Low_complexity 1 22 0 770 240 31 52 chr10 115947198 115947270 -29642018 + MER58A DNA MER1_type 1 73 -2347 2205 88 7 10 chr10 115947270 115947567 -29641721 + AluSx SINE Alu 14 309 -3 770 240 31 52 chr10 115947567 115947723 -29641565 + MER58A DNA MER1_type 73 224 0 1415 188 34 48 chr10 115949792 115950084 -29639204 - AluJb SINE Alu -13 289 2 826 154 0 29 chr10 115950097 115950233 -29639055 - FLAM_C SINE Alu -1 132 1 676 269 118 57 chr10 115950444 115950827 -29638461 - L2 LINE L2 0 3313 2908 819 369 86 13 chr10 115950874 115951489 -29637799 - L2 LINE L2 -492 2822 2163 21 0 0 0 chr10 115951495 115951516 -29637772 + AT_rich Low_complexity Low_complexity 1 21 0 328 204 6 23 chr10 115951531 115951707 -29637581 + (TA)n Simple_repeat Simple_repeat 2 174 0 212 273 8 0 chr10 115951725 115951857 -29637431 + (TA)n Simple_repeat Simple_repeat 1 133 0 216 221 134 117 chr10 115951889 115952196 -29637092 - L2 LINE L2 -1212 2102 1791 305 367 34 34 chr10 115953810 115954017 -29635271 - MIR SINE MIR -55 207 1 344 288 60 82 chr10 115954036 115954220 -29635068 + MIR SINE MIR 27 206 -56 34 79 0 0 chr10 115954225 115954301 -29634987 + AT_rich Low_complexity Low_complexity 1 76 0 307 272 37 25 chr10 115955363 115955525 -29633763 - MER103 DNA DNA 0 166 3 27 81 0 0 chr10 115955981 115956043 -29633245 + AT_rich Low_complexity Low_complexity 1 62 0 991 179 0 0 chr10 115956163 115956325 -29632963 + AluSg/x SINE Alu 137 298 -14 584 222 66 50 chr10 115956404 115956602 -29632686 - L2 LINE L2 -1 3312 3112 506 286 40 56 chr10 115956585 115956837 -29632451 - L2 LINE L2 -76 3237 2990 * 282 292 125 31 chr10 115956841 115957033 -29632255 - L1MC/D LINE L1 -2045 5763 5554 1461 283 40 10 chr10 115957370 115957989 -29631299 + L1ME1 LINE L1 2153 2790 -3356 1115 238 111 22 chr10 115957990 115958384 -29630904 + MSTB2 LTR MaLR 10 457 0 974 227 13 0 chr10 115958384 115958622 -29630666 + L1ME1 LINE L1 2792 3032 -3114 1199 176 55 85 chr10 115958622 115958986 -29630302 + L1ME1 LINE L1 5542 5894 -272 362 279 43 34 chr10 115958987 115959195 -29630093 - L1MC/D LINE L1 -2045 4101 3892 315 0 0 0 chr10 115960035 115960070 -29629218 + (CA)n Simple_repeat Simple_repeat 1 35 0 444 226 0 0 chr10 115960114 115960198 -29629090 - AluJ/FLAM SINE Alu -228 84 1 1323 187 12 94 chr10 115960289 115960620 -29628668 - AluJo SINE Alu -8 304 1 289 191 63 16 chr10 115961220 115961283 -29628005 + MIR3 SINE MIR 115 180 -28 2796 201 14 3 chr10 115962022 115962605 -29626683 - L1MB2 LINE L1 -2 6169 5581 1038 153 0 6 chr10 115962614 115962784 -29626504 + MLT1A1 LTR MaLR 1 169 -196 58 28 0 0 chr10 115963028 115963100 -29626188 + AT_rich Low_complexity Low_complexity 1 72 0 230 290 54 0 chr10 115966319 115966412 -29622876 + (TGAA)n Simple_repeat Simple_repeat 1 98 0 649 308 51 24 chr10 115966412 115966763 -29622525 - L2 LINE L2 -195 3118 2770 1977 158 118 9 chr10 115967298 115967749 -29621539 + Tigger3(Golem) DNA MER2_type 1 402 -2627 230 81 27 0 chr10 115967749 115967786 -29621502 + (CTCA)n Simple_repeat Simple_repeat 1 38 0 1977 158 118 9 chr10 115967786 115967866 -29621422 + Tigger3(Golem) DNA MER2_type 402 2769 -260 400 200 24 12 chr10 115967863 115967948 -29621340 + Tigger3(Golem) DNA MER2_type 2952 3037 0 * 906 208 99 0 chr10 115968749 115968951 -29620337 - MER58A DNA MER1_type 0 224 3 274 374 123 12 chr10 115969274 115969445 -29619843 + MIR3 SINE MIR 16 205 -3 317 246 0 0 chr10 115970189 115970254 -29619034 - MER94 DNA DNA -8 126 62 1494 269 26 24 chr10 115971507 115971968 -29617320 + MLT1C LTR MaLR 1 462 -5 441 344 53 5 chr10 115972081 115972270 -29617018 + MIR SINE MIR 1 198 -64 4893 165 76 22 chr10 115972303 115973224 -29616064 + L1MA9 LINE L1 4158 5027 -1285 1555 182 37 27 chr10 115973224 115973520 -29615768 + AluJb SINE Alu 3 301 -11 4893 165 76 22 chr10 115973520 115974353 -29614935 + L1MA9 LINE L1 5027 6034 -278 978 171 83 0 chr10 115974362 115974578 -29614710 - L1MA9 LINE L1 -1 6311 6078 801 202 132 12 chr10 115974601 115974844 -29614444 + L1MA9 LINE L1 6019 6290 -22 249 57 0 0 chr10 115975278 115975313 -29613975 + (TG)n Simple_repeat Simple_repeat 1 35 0 249 83 0 0 chr10 115976004 115976040 -29613248 + (CA)n Simple_repeat Simple_repeat 1 36 0 307 62 62 0 chr10 115976121 115976169 -29613119 - L1MA9 LINE L1 -33 6279 6229 947 169 108 8 chr10 115976170 115976414 -29612874 + MER47A DNA MER2_type 1 366 0 1137 151 75 5 chr10 115976462 115976674 -29612614 - L1MA9 LINE L1 -231 6081 5855 197 370 103 9 chr10 115977173 115977397 -29611891 + L3 LINE CR1 1244 1488 -89 288 0 0 0 chr10 115977413 115977445 -29611843 + (TG)n Simple_repeat Simple_repeat 2 33 0 414 331 8 8 chr10 115978406 115978530 -29610758 + L2 LINE L2 3190 3313 0 559 301 142 0 chr10 115978986 115979205 -29610083 + MIR SINE MIR 5 254 -8 187 330 124 10 chr10 115979541 115979638 -29609650 - MIR3 SINE MIR -13 195 88 308 350 81 0 chr10 115980183 115980306 -29608982 - L2 LINE L2 0 3272 3140 264 279 51 0 chr10 115981244 115981323 -29607965 - L2 LINE L2 -2 3311 3229 324 0 0 0 chr10 115981662 115981698 -29607590 + (TA)n Simple_repeat Simple_repeat 2 37 0 24 0 0 0 chr10 115981755 115981779 -29607509 + AT_rich Low_complexity Low_complexity 1 24 0 288 0 0 0 chr10 115982084 115982116 -29607172 + (CA)n Simple_repeat Simple_repeat 1 32 0 280 315 70 67 chr10 115982226 115982779 -29606509 + L1MEd LINE L1 501 1055 -5064 828 254 40 0 chr10 115982788 115982965 -29606323 + MER5A DNA MER1_type 1 184 -5 437 261 72 62 chr10 115982970 115983165 -29606123 + L1MEd LINE L1 1061 1257 -4862 4772 258 74 42 chr10 115983246 115985629 -29603659 + L1M4b LINE L1 2 2463 -4496 322 200 0 0 chr10 115985707 115985762 -29603526 + Tigger5 DNA MER2_type 1 55 -2268 * 360 192 14 14 chr10 115985731 115985804 -29603484 + Tigger5 DNA MER2_type 2251 2323 0 243 167 278 0 chr10 115985852 115985924 -29603364 + Tigger5 DNA MER2_type 2232 2323 0 27 49 0 0 chr10 115986099 115986140 -29603148 + AT_rich Low_complexity Low_complexity 1 41 0 3680 258 79 43 chr10 115986151 115988284 -29601004 + L1M4b LINE L1 2643 4813 -2144 1725 256 46 35 chr10 115988575 115989201 -29600087 + L1M4 LINE L1 3465 4097 -2049 216 0 0 0 chr10 115990117 115990141 -29599147 + (A)n Simple_repeat Simple_repeat 1 24 0 243 0 0 0 chr10 115990464 115990491 -29598797 + (A)n Simple_repeat Simple_repeat 1 27 0 207 337 82 0 chr10 115991397 115991495 -29597793 - L3 LINE CR1 -166 1411 1306 2197 111 0 0 chr10 115993139 115993437 -29595851 - AluSq SINE Alu -15 298 1 293 420 7 0 chr10 115993519 115993669 -29595619 + MLT1K LTR MaLR 109 259 -329 534 296 37 57 chr10 115994275 115994532 -29594756 - MIR SINE MIR -2 260 9 225 350 0 10 chr10 115994665 115994762 -29594526 + MIR3 SINE MIR 111 206 -2 210 292 42 14 chr10 115994937 115995009 -29594279 - L2 LINE L2 0 3272 3199 420 71 0 0 chr10 115995236 115995292 -29593996 + (CA)n Simple_repeat Simple_repeat 1 56 0 2152 112 10 0 chr10 115997677 115997982 -29591306 + AluY SINE Alu 1 308 -3 2229 33 44 11 chr10 115999069 115999371 -29589917 - AluY SINE Alu 0 311 1 21 0 0 0 chr10 116000179 116000200 -29589088 + AT_rich Low_complexity Low_complexity 1 21 0 403 271 76 0 chr10 116000200 116000318 -29588970 + L3 LINE CR1 599 725 -852 207 294 54 43 chr10 116001431 116001523 -29587765 - L2 LINE L2 -90 3182 3090 21 0 0 0 chr10 116001882 116001903 -29587385 + AT_rich Low_complexity Low_complexity 1 21 0 265 257 88 47 chr10 116001912 116002060 -29587228 - L1ME4a LINE L1 -201 5920 5767 206 182 36 0 chr10 116002971 116003026 -29586262 + (CATA)n Simple_repeat Simple_repeat 2 58 0 221 272 184 9 chr10 116003032 116003146 -29586142 - MIR SINE MIR -17 245 112 999 151 0 28 chr10 116003221 116003400 -29585888 - AluSg/x SINE Alu -2 310 137 183 325 100 25 chr10 116003477 116003557 -29585731 - MIR SINE MIR -13 249 164 2077 130 13 0 chr10 116003760 116004060 -29585228 + AluSx SINE Alu 1 304 -8 447 274 39 67 chr10 116006105 116006284 -29583004 - L2 LINE L2 0 3313 3140 188 335 85 27 chr10 116006442 116006630 -29582658 + MIR SINE MIR 64 262 0 692 171 0 8 chr10 116006729 116006858 -29582430 - FLAM_C SINE Alu -15 128 1 831 303 57 60 chr10 116007133 116007645 -29581643 - LTR33A LTR ERVL -11 512 3 280 239 28 0 chr10 116008412 116008483 -29580805 - HsTC2 DNA Tc2 -1823 75 3 531 289 107 10 chr10 116008510 116008707 -29580581 - MIR SINE MIR -1 261 46 254 146 0 18 chr10 116008892 116008947 -29580341 + (CA)n Simple_repeat Simple_repeat 1 54 0 210 290 214 15 chr10 116009773 116009904 -29579384 + MIR3 SINE MIR 37 193 -15 2210 119 0 3 chr10 116009992 116010303 -29578985 - AluSg SINE Alu 0 310 1 1101 193 5 14 chr10 116011061 116011268 -29578020 + MLT1A1 LTR MaLR 161 365 0 318 26 0 0 chr10 116011493 116011532 -29577756 + (CA)n Simple_repeat Simple_repeat 1 39 0 280 244 165 39 chr10 116011749 116011876 -29577412 + MIR SINE MIR 117 259 -3 471 258 0 0 chr10 116013427 116013524 -29575764 + MER5A DNA MER1_type 10 106 -83 454 220 0 22 chr10 116013550 116013641 -29575647 - MER5B DNA MER1_type -33 145 57 512 205 11 3 chr10 116013671 116013780 -29575508 + L1MA8 LINE L1 6168 6266 -25 583 219 50 0 chr10 116013791 116013910 -29575378 + MER5A DNA MER1_type 65 189 0 306 280 48 42 chr10 116014114 116014282 -29575006 + MLT1K LTR MaLR 383 551 -37 269 376 75 0 chr10 116014343 116014476 -29574812 - L3 LINE CR1 -83 1494 1352 188 315 102 65 chr10 116014507 116014723 -29574565 - L3 LINE CR1 -336 1241 1018 271 319 138 0 chr10 116015045 116015183 -29574105 + MIR SINE MIR 98 254 -8 236 364 87 10 chr10 116015334 116015529 -29573759 - L3 LINE CR1 -643 934 725 1333 131 50 14 chr10 116015588 116015810 -29573478 + MER30 DNA MER1_type 1 230 0 190 300 0 17 chr10 116015810 116015861 -29573427 - L2 LINE L2 -84 3229 3178 1751 218 33 33 chr10 116017184 116017408 -29571880 + MLT2B2 LTR ERVL 1 219 -335 195 42 0 0 chr10 116017408 116017432 -29571856 + (TC)n Simple_repeat Simple_repeat 2 25 0 1751 218 33 33 chr10 116017432 116017655 -29571633 + MLT2B2 LTR ERVL 219 440 -114 631 23 46 0 chr10 116017665 116017752 -29571536 + (TAGA)n Simple_repeat Simple_repeat 4 94 0 499 102 23 0 chr10 116017776 116017864 -29571424 + (GA)n Simple_repeat Simple_repeat 2 91 0 4220 190 36 13 chr10 116017994 116018920 -29570368 - L1MA9 LINE L1 0 6312 5366 326 278 98 64 chr10 116019869 116020164 -29569124 - L1MC/D LINE L1 -2244 5564 5260 2135 46 50 50 chr10 116020240 116020523 -29568765 - AluY SINE Alu -15 296 14 288 0 0 0 chr10 116020698 116020730 -29568558 + (TG)n Simple_repeat Simple_repeat 2 33 0 331 286 92 0 chr10 116020784 116020903 -29568385 - LTR33 LTR ERVL -3 518 389 709 187 39 50 chr10 116021197 116021379 -29567909 + MER33 DNA MER1_type 9 188 -136 1990 86 3 92 chr10 116021384 116021709 -29567579 - AluSc SINE Alu -13 296 1 255 60 120 20 chr10 116021709 116021759 -29567529 + MER33 DNA MER1_type 281 335 -28 22 35 0 0 chr10 116021856 116021885 -29567403 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr10 116022130 116022158 -29567130 + AT_rich Low_complexity Low_complexity 1 28 0 597 306 114 56 chr10 116022217 116023121 -29566167 - L1MC/D LINE L1 -1624 4522 3554 266 253 103 34 chr10 116023306 116023539 -29565749 - L1MC/D LINE L1 -2982 3164 2916 21 57 0 0 chr10 116024055 116024090 -29565198 + AT_rich Low_complexity Low_complexity 1 35 0 1798 261 28 59 chr10 116024307 116024345 -29564943 + MLT1E LTR MaLR 4 42 -551 2501 102 3 19 chr10 116024345 116024706 -29564582 + THE1A LTR MaLR 1 355 0 1798 261 28 59 chr10 116024706 116025276 -29564012 + MLT1E LTR MaLR 42 593 0 288 227 80 0 chr10 116025278 116025381 -29563907 - L1ME2 LINE L1 -191 5973 5864 2065 138 3 3 chr10 116025440 116025752 -29563536 - AluJb SINE Alu 0 312 1 405 167 0 0 chr10 116026609 116026687 -29562601 + (CA)n Simple_repeat Simple_repeat 2 79 0 213 263 0 152 chr10 116026687 116026786 -29562502 + MIR3 SINE MIR 82 165 -43 2285 111 3 0 chr10 116028845 116029152 -29560136 + AluSx SINE Alu 1 308 -4 262 325 211 0 chr10 116029758 116029924 -29559364 - L3 LINE CR1 -12 1565 1365 236 204 20 0 chr10 116029937 116029986 -29559302 + (TATATG)n Simple_repeat Simple_repeat 5 54 0 2021 198 23 8 chr10 116029987 116030382 -29558906 - L1MC1 LINE L1 -38 6295 5895 324 325 76 13 chr10 116030390 116030547 -29558741 - L3 LINE CR1 -242 1335 1169 216 250 0 0 chr10 116031084 116031132 -29558156 - MIR SINE MIR -147 115 68 36 40 0 0 chr10 116031158 116031208 -29558080 + AT_rich Low_complexity Low_complexity 1 50 0 650 350 38 0 chr10 116032344 116032661 -29556627 - ERVL LTR ERVL -1146 4618 4290 381 310 39 63 chr10 116034268 116034523 -29554765 - L2 LINE L2 -12 3301 3053 2278 96 0 22 chr10 116034523 116034836 -29554452 + AluSc SINE Alu 1 306 -3 582 290 106 5 chr10 116034845 116035062 -29554226 - L2 LINE L2 -367 2947 2709 258 81 0 0 chr10 116035214 116035251 -29554037 + (GA)n Simple_repeat Simple_repeat 2 38 0 2043 259 58 33 chr10 116035870 116036442 -29552846 + MLT1E LTR MaLR 8 593 0 728 79 0 0 chr10 116036533 116036634 -29552654 + AluSp/q SINE Alu 208 308 -5 200 378 14 0 chr10 116037143 116037217 -29552071 + MIR SINE MIR 33 107 -155 383 329 71 32 chr10 116037274 116037526 -29551762 + MIR SINE MIR 1 262 0 506 315 60 11 chr10 116037937 116038121 -29551167 + MIR SINE MIR 3 195 -67 734 325 104 28 chr10 116038137 116038607 -29550681 + LTR33 LTR ERVL 1 506 -15 192 309 0 0 chr10 116038615 116038670 -29550618 + MIR SINE MIR 208 262 0 667 308 61 75 chr10 116041305 116041814 -29547474 - L2 LINE L2 0 3313 2812 1563 219 54 16 chr10 116041897 116042267 -29547021 - MLT1B LTR MaLR -6 384 1 357 226 73 48 chr10 116042955 116043079 -29546209 - MIR SINE MIR -86 176 50 19602 32 3 0 chr10 116043350 116046480 -29542808 + L1PA4 LINE L1 3013 6147 -8 405 0 0 0 chr10 116046555 116046600 -29542688 + (CA)n Simple_repeat Simple_repeat 1 45 0 25 31 0 0 chr10 116047561 116047593 -29541695 + AT_rich Low_complexity Low_complexity 1 32 0 681 317 77 57 chr10 116047712 116048240 -29541048 - L2 LINE L2 -3 3310 2762 363 316 35 26 chr10 116048372 116048486 -29540802 + L2 LINE L2 3158 3272 0 289 337 0 20 chr10 116048495 116048596 -29540692 + MIR SINE MIR 2 100 -162 706 186 0 0 chr10 116049308 116049432 -29539856 - FLAM_C SINE Alu -19 124 1 597 195 59 18 chr10 116049542 116049711 -29539577 - MER96B DNA MER1_type? -241 176 1 21 36 0 0 chr10 116049735 116049763 -29539525 + AT_rich Low_complexity Low_complexity 1 28 0 219 216 0 0 chr10 116049808 116049845 -29539443 + (CA)n Simple_repeat Simple_repeat 1 37 0 25 0 0 0 chr10 116050343 116050368 -29538920 + AT_rich Low_complexity Low_complexity 1 25 0 1854 157 3 10 chr10 116050370 116050656 -29538632 + AluJo SINE Alu 1 286 -26 405 0 0 0 chr10 116050656 116050701 -29538587 + (CA)n Simple_repeat Simple_repeat 2 46 0 1854 157 3 10 chr10 116050701 116050727 -29538561 + AluJo SINE Alu 286 311 -1 1020 253 14 90 chr10 116053278 116053634 -29535654 - MER93a LTR ERV1 0 402 74 216 312 72 43 chr10 116054278 116054416 -29534872 + MIR SINE MIR 11 152 -110 310 312 101 0 chr10 116054805 116054914 -29534374 + L2 LINE L2 3194 3313 0 247 221 105 53 chr10 116055968 116056063 -29533225 - MIR SINE MIR -62 146 47 852 221 0 6 chr10 116056105 116056268 -29533020 + FAM SINE Alu 1 162 -13 2674 39 0 0 chr10 116056551 116056858 -29532430 - AluY SINE Alu -4 307 1 182 361 71 44 chr10 116056881 116057064 -29532224 + MIR3 SINE MIR 16 203 -5 1650 161 76 48 chr10 116058669 116059023 -29530265 - THE1B LTR MaLR 0 364 1 909 74 0 0 chr10 116059517 116059639 -29529649 + (TA)n Simple_repeat Simple_repeat 2 123 0 460 116 58 0 chr10 116060330 116060416 -29528872 + L1MA5A LINE L1 6207 6297 0 456 209 122 14 chr10 116061070 116061209 -29528079 - L1MD3 LINE L1 0 7995 7842 1530 229 63 7 chr10 116061209 116061620 -29527668 - L1MC4a LINE L1 -299 7509 7076 338 71 0 0 chr10 116061790 116061832 -29527456 - MSTA LTR MaLR 0 428 387 2400 93 0 10 chr10 116061833 116062145 -29527143 + AluSq SINE Alu 1 309 -4 2345 143 25 5 chr10 116062171 116062564 -29526724 - MSTA LTR MaLR -27 401 1 354 98 0 0 chr10 116063454 116063464 -29525824 + (CA)n Simple_repeat Simple_repeat 1 61 0 354 98 0 0 chr10 116063464 116063515 -29525773 + (CA)n Simple_repeat Simple_repeat 2 52 0 24 53 0 0 chr10 116063574 116063612 -29525676 + AT_rich Low_complexity Low_complexity 1 38 0 286 305 25 25 chr10 116064852 116064970 -29524318 - MER94 DNA DNA -13 121 4 418 246 82 0 chr10 116065303 116065437 -29523851 + MER104 DNA Tc2 4 148 -32 1737 212 58 48 chr10 116065658 116066158 -29523130 + MLT1D LTR MaLR 1 505 0 214 361 23 7 chr10 116066173 116066397 -29522891 + L2 LINE L2 2730 3015 -257 199 238 50 50 chr10 116066640 116066720 -29522568 - MIR SINE MIR -127 135 56 861 59 0 0 chr10 116067056 116067174 -29522114 - L1P LINE L1 -3016 3130 3013 344 211 79 53 chr10 116067446 116067560 -29521728 + MIR SINE MIR 50 166 -96 2043 259 58 33 chr10 116070220 116070792 -29518496 + MLT1E LTR MaLR 8 593 0 625 124 0 0 chr10 116070883 116070980 -29518308 + AluSp/q SINE Alu 208 304 -9 225 309 18 36 chr10 116071391 116071501 -29517787 - MIR SINE MIR -128 134 27 314 329 31 43 chr10 116072344 116072506 -29516782 + MIR SINE MIR 10 144 -64 7244 34 16 0 chr10 116073094 116074595 -29514693 + L1PA4 LINE L1 4643 6154 -1 1535 207 12 61 chr10 116074608 116075018 -29514270 + MLT2C1 LTR ERVL 1 390 -7 6150 245 51 22 chr10 116075073 116077209 -29512079 + ERVL-C1 LTR ERVL 25 2292 -3472 1172 185 10 22 chr10 116077210 116077510 -29511778 + ERVL-C1 LTR ERVL 2425 2806 -2958 192 350 19 0 chr10 116077724 116077827 -29511461 + L2 LINE L2 2911 3015 -257 206 345 246 0 chr10 116077938 116078048 -29511240 + L2 LINE L2 3134 3270 -2 245 281 11 22 chr10 116078069 116078158 -29511130 - MIR SINE MIR -128 134 47 299 337 31 43 chr10 116079022 116079184 -29510104 + MIR SINE MIR 10 144 -64 238 175 0 0 chr10 116079721 116079761 -29509527 - Alu SINE Alu -239 63 24 195 368 11 11 chr10 116080514 116080601 -29508687 + MIR SINE MIR 56 142 -120 390 353 26 56 chr10 116081265 116081497 -29507791 - MER115 DNA AcHobo -425 268 44 1531 106 13 34 chr10 116081607 116081842 -29507446 - MER30 DNA MER1_type 0 230 1 375 333 46 7 chr10 116082362 116082515 -29506773 + MIR3 SINE MIR 37 195 -13 270 0 0 0 chr10 116082621 116082651 -29506637 + (A)n Simple_repeat Simple_repeat 1 30 0 2187 110 10 10 chr10 116083576 116083884 -29505404 + AluSx SINE Alu 1 308 -4 201 258 0 0 chr10 116083906 116084026 -29505262 + (TA)n Simple_repeat Simple_repeat 1 120 0 316 211 0 115 chr10 116084043 116084147 -29505141 - L1MC4 LINE L1 -1337 6705 6614 567 250 0 4 chr10 116084163 116084650 -29504638 + (TA)n Simple_repeat Simple_repeat 1 485 0 21 0 0 0 chr10 116084903 116084924 -29504364 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr10 116085517 116085539 -29503749 + AT_rich Low_complexity Low_complexity 1 22 0 2167 126 26 0 chr10 116086766 116087068 -29502220 + AluSx SINE Alu 1 310 -2 313 306 0 83 chr10 116087186 116087307 -29501981 + L2 LINE L2 3199 3309 -4 1701 158 20 17 chr10 116087929 116088226 -29501062 + AluJo SINE Alu 1 298 -14 846 224 73 8 chr10 116088418 116088563 -29500725 + L1MA8 LINE L1 6008 6142 -149 243 0 0 0 chr10 116088563 116088590 -29500698 + (CA)n Simple_repeat Simple_repeat 1 27 0 846 224 73 8 chr10 116088590 116088703 -29500585 + L1MA8 LINE L1 6142 6283 -8 291 247 60 60 chr10 116089171 116089321 -29499967 + L1MC/D LINE L1 5667 5816 -1992 180 244 0 0 chr10 116090484 116090525 -29498763 - L2 LINE L2 -83 3230 3190 10161 248 85 21 chr10 116090757 116091370 -29497918 + L1MC2 LINE L1 35 607 -5737 9175 26 6 1 chr10 116091370 116093236 -29496052 + L1PA4 LINE L1 4281 6154 -1 10161 248 85 21 chr10 116093236 116094049 -29495239 + L1MC2 LINE L1 607 1366 -4978 312 197 26 13 chr10 116094049 116094125 -29495163 + MADE1 DNA Mariner 4 80 0 10161 248 85 21 chr10 116094125 116097543 -29491745 + L1MC2 LINE L1 1366 5515 -829 2339 78 3 3 chr10 116097543 116097849 -29491439 + AluY SINE Alu 1 306 -5 10161 248 85 21 chr10 116097849 116098287 -29491001 + L1MC2 LINE L1 5515 5923 -421 1081 214 24 0 chr10 116098923 116099133 -29490155 - MER20 DNA MER1_type -4 215 1 285 299 104 28 chr10 116099339 116099483 -29489805 - MIR SINE MIR -10 252 98 905 119 8 0 chr10 116099483 116099609 -29489679 + AluSq/x SINE Alu 1 127 -186 1898 149 0 7 chr10 116099620 116099908 -29489380 + AluSx SINE Alu 1 286 -26 684 170 71 0 chr10 116100556 116100697 -29488591 - L1ME3A LINE L1 -12 6158 6008 436 277 96 30 chr10 116101179 116101345 -29487943 + MER5B DNA MER1_type 2 178 0 1549 196 0 0 chr10 116101872 116102138 -29487150 - AluJo SINE Alu -46 266 1 27 62 0 0 chr10 116102532 116102580 -29486708 + AT_rich Low_complexity Low_complexity 1 48 0 1833 232 68 20 chr10 116102737 116103194 -29486094 - MLT1D LTR MaLR -26 479 1 36 0 0 0 chr10 116103753 116103789 -29485499 + AT_rich Low_complexity Low_complexity 1 36 0 1764 172 7 0 chr10 116103941 116104232 -29485056 + AluSq SINE Alu 12 304 -9 721 116 27 0 chr10 116104253 116104365 -29484923 + AluJb SINE Alu 9 123 -189 186 43 0 0 chr10 116104382 116104405 -29484883 + (TAAAA)n Simple_repeat Simple_repeat 3 25 0 4119 136 15 145 chr10 116104852 116105888 -29483400 + MER4D LTR ERV1 2 903 0 202 324 45 63 chr10 116106086 116106197 -29483091 + MIR3 SINE MIR 94 202 -6 252 86 0 0 chr10 116106654 116106689 -29482599 + (CA)n Simple_repeat Simple_repeat 2 36 0 809 265 57 5 chr10 116108132 116108343 -29480945 + MIR SINE MIR 31 252 -10 1567 194 47 0 chr10 116108390 116108709 -29480579 - MER58B DNA MER1_type -2 339 6 2193 172 31 7 chr10 116109055 116109460 -29479828 + MSTA LTR MaLR 21 428 0 375 216 53 13 chr10 116109524 116109654 -29479634 - MIR SINE MIR -63 145 41 1442 165 61 61 chr10 116109943 116110240 -29479048 + AluJo SINE Alu 1 297 -15 2073 230 46 57 chr10 116110261 116110821 -29478467 + MLT2B3 LTR ERVL 1 554 0 24 0 0 0 chr10 116111485 116111509 -29477779 + AT_rich Low_complexity Low_complexity 1 24 0 22 56 0 0 chr10 116111541 116111577 -29477711 + AT_rich Low_complexity Low_complexity 1 36 0 1044 100 0 0 chr10 116112069 116112209 -29477079 - AluSg/x SINE Alu 0 310 171 1208 76 0 0 chr10 116112209 116112353 -29476935 + AluSc SINE Alu 23 166 -143 234 280 93 44 chr10 116112546 116112728 -29476560 - L1ME3A LINE L1 -86 6084 5894 1317 195 124 13 chr10 116112854 116113152 -29476136 - MSTB LTR MaLR -82 344 14 396 265 10 10 chr10 116114103 116114201 -29475087 - MER5B DNA MER1_type -60 118 21 28 29 0 0 chr10 116114498 116114533 -29474755 + AT_rich Low_complexity Low_complexity 1 35 0 348 204 0 3 chr10 116114556 116114625 -29474663 - MSTB LTR MaLR -361 67 1 517 234 98 58 chr10 116114645 116115004 -29474284 + L1MEd LINE L1 855 1227 -4892 1475 303 48 29 chr10 116115650 116115733 -29473555 - L2 LINE L2 -133 3180 3100 508 299 23 6 chr10 116115733 116115907 -29473381 - MER5B DNA MER1_type 0 178 2 1475 303 48 29 chr10 116115907 116116653 -29472635 - L2 LINE L2 -213 3100 2328 2282 62 0 0 chr10 116118070 116118368 -29470920 - AluSc SINE Alu 0 308 11 270 240 67 0 chr10 116118659 116118734 -29470554 - MER116 DNA Mariner 0 80 1 1721 178 11 3 chr10 116118853 116119140 -29470148 - AluJo SINE Alu -23 289 1 505 266 8 0 chr10 116119152 116119276 -29470012 - FLAM_C SINE Alu -8 125 1 331 331 104 0 chr10 116119781 116119935 -29469353 + MIR3 SINE MIR 5 174 -34 3355 194 37 11 chr10 116120367 116121123 -29468165 + L1MC1 LINE L1 5552 6327 -6 22 0 0 0 chr10 116121824 116121846 -29467442 + AT_rich Low_complexity Low_complexity 1 22 0 32 0 0 0 chr10 116122405 116122437 -29466851 + AT_rich Low_complexity Low_complexity 1 32 0 607 269 75 11 chr10 116122437 116122623 -29466665 - MIR SINE MIR -64 198 1 2222 196 207 92 chr10 116122989 116123914 -29465374 + LTR28 LTR ERV1 1 1020 0 33113 154 19 15 chr10 116123917 116124873 -29464415 + LTR28-int LTR ERV1 6 956 -5924 2279 97 0 3 chr10 116124873 116125171 -29464117 + AluSc SINE Alu 3 299 -10 33113 154 19 15 chr10 116125171 116130473 -29458815 + LTR28-int LTR ERV1 956 6463 -417 281 288 53 53 chr10 116132288 116132420 -29456868 - MIR SINE MIR -116 146 15 469 342 43 22 chr10 116133807 116134038 -29455250 + MIR SINE MIR 15 250 -12 1846 135 193 11 chr10 116134623 116134985 -29454303 + MSTA LTR MaLR 1 428 0 6672 33 0 0 chr10 116135638 116136473 -29452815 + L1PA3 LINE L1 5355 6189 0 4851 138 8 49 chr10 116138074 116138787 -29450501 + L1PA16 LINE L1 5299 5971 -195 2166 129 22 25 chr10 116138787 116139152 -29450136 - THE1B LTR MaLR 0 364 1 4851 138 8 49 chr10 116139152 116139321 -29449967 + L1PA16 LINE L1 5971 6145 -21 34 72 0 0 chr10 116139396 116139465 -29449823 + AT_rich Low_complexity Low_complexity 1 69 0 294 282 207 38 chr10 116140919 116141132 -29448156 + MLT1H LTR MaLR 26 274 -275 984 356 168 25 chr10 116141241 116142200 -29447088 - L2 LINE L2 -1634 1680 464 2528 94 37 0 chr10 116142200 116142551 -29446737 + THE1B LTR MaLR 1 364 0 984 356 168 25 chr10 116142551 116142968 -29446320 - L2 LINE L2 -2850 464 108 22 0 0 0 chr10 116145132 116145154 -29444134 + AT_rich Low_complexity Low_complexity 1 22 0 1953 244 29 39 chr10 116145289 116146016 -29443272 - L1MC5 LINE L1 -73 7888 7169 234 0 0 0 chr10 116146132 116146158 -29443130 + (A)n Simple_repeat Simple_repeat 1 26 0 2154 107 0 20 chr10 116146611 116146773 -29442515 - AluSc SINE Alu -17 292 128 441 0 0 0 chr10 116146773 116146822 -29442466 + (TTTA)n Simple_repeat Simple_repeat 2 50 0 2195 62 29 0 chr10 116146822 116147098 -29442190 - AluY SINE Alu -27 284 1 2154 107 0 20 chr10 116147098 116147232 -29442056 - AluSc SINE Alu -179 130 1 281 132 40 26 chr10 116147941 116148017 -29441271 + GA-rich Low_complexity Low_complexity 3 79 0 1058 70 35 6 chr10 116148022 116148194 -29441094 + (GAAA)n Simple_repeat Simple_repeat 4 180 0 267 229 0 62 chr10 116148229 116148325 -29440963 - L2 LINE L2 -298 2974 2885 449 321 0 0 chr10 116148635 116148769 -29440519 + MER94 DNA DNA 1 134 0 249 391 93 0 chr10 116148817 116148968 -29440320 + L2 LINE L2 3104 3268 -4 2004 151 141 5 chr10 116149876 116150253 -29439035 + MSTA LTR MaLR 1 428 0 1106 177 174 67 chr10 116150338 116150665 -29438623 - MER93b LTR ERV1 0 373 12 2226 97 7 17 chr10 116150666 116150966 -29438322 - AluY SINE Alu -14 297 1 295 335 84 26 chr10 116152087 116152278 -29437010 + MIR3 SINE MIR 1 202 -6 259 172 108 65 chr10 116153311 116153404 -29435884 + Charlie7 DNA MER1_type 43 139 -2473 587 164 71 7 chr10 116153522 116153662 -29435626 + L1MB1 LINE L1 6033 6181 -8 280 86 0 0 chr10 116153919 116153954 -29435334 + U2 snRNA snRNA 1 35 -153 420 235 60 13 chr10 116154045 116154194 -29435094 + Charlie7 DNA MER1_type 319 474 -2138 21 0 0 0 chr10 116154288 116154309 -29434979 + AT_rich Low_complexity Low_complexity 1 21 0 1737 142 55 0 chr10 116154310 116154585 -29434703 + AluSx SINE Alu 21 310 -2 447 264 108 41 chr10 116154626 116154941 -29434347 + Charlie7 DNA MER1_type 1805 2140 -472 293 235 34 84 chr10 116154953 116155041 -29434247 + L2 LINE L2 3199 3281 -32 2201 179 7 7 chr10 116155041 116155444 -29433844 + MER57A LTR ERV1 1 403 0 293 235 34 84 chr10 116155444 116155474 -29433814 + L2 LINE L2 3281 3311 -2 615 197 51 62 chr10 116155493 116155671 -29433617 - MER53 DNA DNA -10 179 4 366 62 0 0 chr10 116155723 116155771 -29433517 - MSTA LTR MaLR -378 50 3 247 352 0 0 chr10 116156612 116156700 -29432588 + MER3 DNA MER1_type 7 94 -115 2361 76 0 20 chr10 116156733 116157035 -29432253 - AluY SINE Alu -15 296 1 22 80 0 0 chr10 116157046 116157096 -29432192 + AT_rich Low_complexity Low_complexity 1 50 0 231 250 15 0 chr10 116157096 116157164 -29432124 - MER3 DNA MER1_type -104 105 37 21 36 0 0 chr10 116157918 116157946 -29431342 + AT_rich Low_complexity Low_complexity 1 28 0 197 347 31 10 chr10 116158351 116158449 -29430839 - L2 LINE L2 -1 3271 3172 * 218 349 85 0 chr10 116158438 116158567 -29430721 + MIR3 SINE MIR 63 202 -6 26 50 0 0 chr10 116160052 116160092 -29429196 + AT_rich Low_complexity Low_complexity 1 40 0 339 138 62 0 chr10 116160592 116160672 -29428616 - L1MA2 LINE L1 0 6304 6220 225 257 67 114 chr10 116162604 116162814 -29426474 + MIR SINE MIR 48 247 -15 596 290 50 38 chr10 116164930 116165168 -29424120 - MIR SINE MIR -18 244 4 2156 142 79 43 chr10 116166550 116166967 -29422321 + MSTB1 LTR MaLR 1 432 0 1059 205 65 79 chr10 116167032 116167373 -29421915 + MER58B DNA MER1_type 3 338 -3 342 0 0 0 chr10 116168149 116168187 -29421101 + (CAT)n Simple_repeat Simple_repeat 2 39 0 439 360 45 41 chr10 116168235 116168724 -29420564 - L2 LINE L2 -456 2858 2368 222 250 0 0 chr10 116171980 116172052 -29417236 + A-rich Low_complexity Low_complexity 1 72 0 515 343 54 5 chr10 116172383 116172587 -29416701 + MIR SINE MIR 5 218 -44 4135 65 18 11 chr10 116174007 116174563 -29414725 - L1PA7 LINE L1 0 6154 5595 1798 74 8 0 chr10 116174563 116174806 -29414482 + L1PA7 LINE L1 5357 5601 -553 302 265 40 60 chr10 116174853 116175004 -29414284 + L1ME3 LINE L1 4373 4520 -1626 1263 142 51 16 chr10 116175007 116175261 -29414027 - MER6 DNA MER2_type -1 864 602 1930 231 45 7 chr10 116175261 116175702 -29413586 - MER6 DNA MER2_type -406 459 2 332 290 101 24 chr10 116175813 116175833 -29413455 + L1ME3 LINE L1 4637 4654 -1492 411 21 0 0 chr10 116175833 116175881 -29413407 + (TCTA)n Simple_repeat Simple_repeat 3 50 0 332 290 101 24 chr10 116175881 116176046 -29413242 + L1ME3 LINE L1 4654 4836 -1310 270 239 124 0 chr10 116176068 116176181 -29413107 + MER52A LTR ERV1 1 127 -1628 4481 183 70 9 chr10 116176248 116177180 -29412108 + MER52A LTR ERV1 649 1755 0 460 310 115 20 chr10 116177564 116178059 -29411229 + L1ME3 LINE L1 5280 5837 -323 1127 304 139 2 chr10 116178668 116179135 -29410153 + L2 LINE L2 2228 2758 -556 539 335 77 31 chr10 116179187 116179447 -29409841 + LTR16A LTR ERVL 57 328 -122 1099 174 100 25 chr10 116181172 116181453 -29407835 - MER5C DNA MER1_type -21 303 2 3152 80 2 5 chr10 116181545 116181983 -29407305 - L1PA10 LINE L1 -1 6167 5731 1969 144 31 36 chr10 116181985 116182345 -29406943 - THE1B LTR MaLR 0 364 7 10743 110 24 5 chr10 116182354 116183903 -29405385 - THE1B-int LTR MaLR -1 1579 2 1934 155 51 25 chr10 116183904 116184259 -29405029 - THE1B LTR MaLR 0 364 1 4678 120 12 4 chr10 116184259 116185375 -29403913 - L1PA10 LINE L1 -435 5733 4607 400 192 64 0 chr10 116185379 116185457 -29403831 - MIR SINE MIR -73 189 107 297 336 37 0 chr10 116185509 116185616 -29403672 + L2 LINE L2 2277 2387 -927 919 253 83 32 chr10 116186186 116186463 -29402825 + MER31B-int LTR ERV1 4565 4861 -75 1684 210 0 0 chr10 116186463 116186772 -29402516 + AluJb SINE Alu 3 311 -1 919 253 83 32 chr10 116186772 116186806 -29402482 + MER31B-int LTR ERV1 4861 4892 -44 1278 183 25 36 chr10 116186810 116187084 -29402204 + MER31B LTR ERV1 6 276 -190 465 260 192 10 chr10 116187183 116187391 -29401897 + MIR SINE MIR 17 262 0 27 29 0 0 chr10 116189304 116189338 -29399950 + AT_rich Low_complexity Low_complexity 1 34 0 2410 91 0 0 chr10 116189464 116189773 -29399515 + AluSc SINE Alu 1 309 0 204 310 70 0 chr10 116190452 116190523 -29398765 - L2 LINE L2 -1 3271 3196 203 373 25 34 chr10 116190731 116190849 -29398439 + L2 LINE L2 2727 2843 -471 1959 134 41 0 chr10 116190967 116191258 -29398030 - AluSx SINE Alu -9 303 1 240 35 0 0 chr10 116191291 116191320 -29397968 + (TG)n Simple_repeat Simple_repeat 2 30 0 235 161 36 0 chr10 116191347 116191403 -29397885 + (TA)n Simple_repeat Simple_repeat 2 59 0 1942 213 132 52 chr10 116191850 116192615 -29396673 + LTR1B LTR ERV1 1 826 0 1526 201 102 91 chr10 116192615 116193154 -29396134 - MLT2B3 LTR ERVL -6 548 1 227 368 11 0 chr10 116193160 116193255 -29396033 - L2 LINE L2 -452 2862 2767 288 311 33 66 chr10 116193267 116193418 -29395870 + L2 LINE L2 2903 3048 -224 198 0 0 0 chr10 116193706 116193728 -29395560 + (T)n Simple_repeat Simple_repeat 1 22 0 207 0 0 0 chr10 116193879 116193902 -29395386 + (CA)n Simple_repeat Simple_repeat 2 24 0 1778 141 52 3 chr10 116193935 116194225 -29395063 + AluSx SINE Alu 3 306 -6 765 311 18 0 chr10 116195601 116195820 -29393468 - MER58A DNA MER1_type 0 224 2 24 53 0 0 chr10 116195951 116195989 -29393299 + AT_rich Low_complexity Low_complexity 1 38 0 41 21 0 0 chr10 116196027 116196075 -29393213 + AT_rich Low_complexity Low_complexity 1 48 0 255 203 0 0 chr10 116196126 116196185 -29393103 + (CATATA)n Simple_repeat Simple_repeat 2 60 0 315 0 0 0 chr10 116196262 116196297 -29392991 + (CA)n Simple_repeat Simple_repeat 2 36 0 248 322 70 73 chr10 116196437 116196751 -29392537 + L2 LINE L2 2507 2819 -495 207 293 158 49 chr10 116196803 116196967 -29392321 + L2 LINE L2 3111 3292 -21 210 71 0 0 chr10 116196980 116197008 -29392280 + (TGAA)n Simple_repeat Simple_repeat 4 31 0 3349 92 2 0 chr10 116197891 116198312 -29390976 + LTR46 LTR ERV1 1 425 -35 228 35 0 0 chr10 116198312 116198341 -29390947 + (TG)n Simple_repeat Simple_repeat 2 30 0 3349 92 2 0 chr10 116198341 116198378 -29390910 + LTR46 LTR ERV1 425 460 0 350 297 62 39 chr10 116198591 116198719 -29390569 - MIR3 SINE MIR -40 168 38 2154 109 0 3 chr10 116199640 116199922 -29389366 + AluSg SINE Alu 1 283 -27 428 0 19 0 chr10 116199922 116199974 -29389314 + (CA)n Simple_repeat Simple_repeat 2 54 0 574 287 69 20 chr10 116201342 116201544 -29387744 - MIR SINE MIR -4 258 47 501 316 34 57 chr10 116202024 116202287 -29387001 + MIR SINE MIR 2 258 -4 282 290 21 11 chr10 116202512 116202605 -29386683 + CT-rich Low_complexity Low_complexity 1 94 0 215 233 17 0 chr10 116202709 116202769 -29386519 + (CATATA)n Simple_repeat Simple_repeat 2 62 0 229 302 40 34 chr10 116202921 116203070 -29386218 + L1ME4a LINE L1 5961 6110 -11 426 312 72 7 chr10 116203223 116203361 -29385927 + MIR SINE MIR 88 234 -28 207 259 0 19 chr10 116204149 116204203 -29385085 + L2 LINE L2 3216 3268 -4 28 29 0 0 chr10 116204206 116204241 -29385047 + AT_rich Low_complexity Low_complexity 1 35 0 625 267 59 84 chr10 116204589 116204988 -29384300 - MLT1G LTR MaLR -8 578 203 588 167 25 0 chr10 116204988 116205108 -29384180 - L1MA9 LINE L1 0 6312 6190 625 267 59 84 chr10 116205108 116205285 -29384003 - MLT1G LTR MaLR -383 203 23 369 164 0 45 chr10 116205925 116205946 -29383342 - MIR3 SINE MIR -35 173 153 829 263 52 0 chr10 116205946 116206159 -29383129 - MER58A DNA MER1_type 0 224 1 369 164 0 45 chr10 116206159 116206204 -29383084 - MIR3 SINE MIR -55 153 110 22 0 0 0 chr10 116207760 116207782 -29381506 + AT_rich Low_complexity Low_complexity 1 22 0 2024 99 44 10 chr10 116209152 116209445 -29379843 + AluSc SINE Alu 1 303 -6 473 314 80 9 chr10 116210890 116211116 -29378172 - MIR SINE MIR -6 256 15 1727 207 89 37 chr10 116211134 116211652 -29377636 + LTR55 LTR ERV 3 547 -1 232 374 76 0 chr10 116212447 116212578 -29376710 + MER20B DNA MER1_type 64 204 -579 567 223 38 55 chr10 116212856 116213094 -29376194 + MER20B DNA MER1_type 549 782 -1 243 314 57 36 chr10 116213123 116213263 -29376025 + MIR SINE MIR 68 210 -52 3193 176 33 56 chr10 116213332 116214095 -29375193 + L1MC3 LINE L1 5286 6030 -1755 213 326 32 21 chr10 116214951 116215046 -29374242 - MIR SINE MIR -160 102 7 646 246 9 76 chr10 116215078 116215302 -29373986 + MIR SINE MIR 44 252 -10 21 36 0 0 chr10 116215381 116215409 -29373879 + AT_rich Low_complexity Low_complexity 1 28 0 207 0 0 0 chr10 116215843 116215866 -29373422 + (TTA)n Simple_repeat Simple_repeat 1 23 0 289 191 78 78 chr10 116216593 116216708 -29372580 - MIR SINE MIR -70 192 78 1177 287 145 32 chr10 116216891 116217396 -29371892 - MLT1E LTR MaLR -2 591 30 239 276 86 0 chr10 116217472 116217588 -29371700 + Tigger8 DNA MER2_type 215 340 -326 515 151 0 32 chr10 116217869 116217962 -29371326 + AluJb SINE Alu 39 128 -184 1717 157 23 30 chr10 116217987 116218292 -29370996 + AluJb SINE Alu 1 303 -9 239 304 139 19 chr10 116218357 116218515 -29370773 + L2 LINE L2 2708 2884 -430 229 226 16 48 chr10 116218842 116218904 -29370384 + L2 LINE L2 3213 3272 0 956 182 12 0 chr10 116219009 116219179 -29370109 - FRAM SINE Alu 0 176 5 1725 186 15 30 chr10 116219789 116220127 -29369161 - MER47B DNA MER2_type -1 417 85 1273 212 18 11 chr10 116220128 116220402 -29368886 + AluJo SINE Alu 21 296 -16 536 186 10 10 chr10 116220402 116220504 -29368784 - MER47B DNA MER2_type -316 102 1 1506 216 110 63 chr10 116222902 116223429 -29365859 - MLT1E LTR MaLR 0 593 42 828 333 34 39 chr10 116223577 116223721 -29365567 + MER115 DNA AcHobo 1 144 -549 875 222 165 42 chr10 116223721 116223865 -29365423 + MLT1A2 LTR MaLR 1 126 -248 309 51 0 0 chr10 116223865 116223904 -29365384 + (TG)n Simple_repeat Simple_repeat 2 40 0 875 222 165 42 chr10 116223904 116223955 -29365333 + MLT1A2 LTR MaLR 126 169 -205 2473 52 0 10 chr10 116223955 116224262 -29365026 - AluY SINE Alu -7 304 1 875 222 165 42 chr10 116224262 116224398 -29364890 + MLT1A2 LTR MaLR 169 374 0 828 333 34 39 chr10 116224398 116224637 -29364651 + MER115 DNA AcHobo 144 382 -311 3724 113 26 3 chr10 116226421 116226988 -29362300 + LTR19B LTR ERV1 1 580 0 293 376 68 0 chr10 116227492 116227609 -29361679 - L2 LINE L2 -1 3312 3188 1673 178 58 0 chr10 116227718 116227993 -29361295 + AluSx SINE Alu 1 291 -21 2121 142 8 11 chr10 116228229 116228610 -29360678 - L1MB3 LINE L1 -7 6176 5797 22 56 0 0 chr10 116229458 116229494 -29359794 + AT_rich Low_complexity Low_complexity 1 36 0 491 260 39 48 chr10 116229542 116229773 -29359515 + MER106A DNA MER1_type 8 236 0 435 38 0 0 chr10 116230946 116230999 -29358289 + (CA)n Simple_repeat Simple_repeat 2 54 0 460 86 7 197 chr10 116231343 116231495 -29357793 + MER4-int LTR ERV1 627 749 -4266 * 1632 93 53 37 chr10 116231493 116231793 -29357495 + MER4-int LTR ERV1 1771 2075 -4523 2528 85 121 6 chr10 116232026 116232546 -29356742 + MER4-int LTR ERV1 1916 2495 -4103 1462 135 57 4 chr10 116232546 116232790 -29356498 - LTR8 LTR ERV1 -434 257 1 13988 123 65 26 chr10 116232790 116235864 -29353424 + MER4-int LTR ERV1 1862 6541 -57 287 274 59 0 chr10 116235864 116235966 -29353322 - MLT1G1 LTR MaLR -487 108 1 235 272 37 37 chr10 116236004 116236140 -29353148 - MLT1J1 LTR MaLR -19 427 292 1920 95 0 69 chr10 116236572 116236907 -29352381 - AluY SINE Alu 0 314 1 701 321 148 28 chr10 116237198 116237591 -29351697 + L2 LINE L2 2843 3282 -31 1918 226 42 60 chr10 116237594 116238190 -29351098 - MLT1E LTR MaLR -2 591 7 1924 119 7 0 chr10 116238211 116238525 -29350763 - AluSx SINE Alu 0 320 5 23 0 0 0 chr10 116238725 116238748 -29350540 + AT_rich Low_complexity Low_complexity 1 23 0 189 299 15 30 chr10 116239349 116239416 -29349872 + MIR SINE MIR 83 148 -114 333 291 24 24 chr10 116239477 116239604 -29349684 - MER5B DNA MER1_type -31 147 21 1247 160 0 0 chr10 116239816 116240004 -29349284 - AluJb SINE Alu -24 288 101 292 211 0 0 chr10 116240004 116240061 -29349227 - AluS SINE Alu -245 58 2 210 71 0 0 chr10 116240503 116240531 -29348757 + (ATG)n Simple_repeat Simple_repeat 2 29 0 1304 239 65 41 chr10 116240643 116241136 -29348152 + MLT1D LTR MaLR 1 626 0 852 211 62 14 chr10 116241820 116242028 -29347260 + MER20 DNA MER1_type 1 218 -1 2135 122 0 3 chr10 116242403 116242698 -29346590 + AluSg SINE Alu 1 294 -16 2121 117 0 0 chr10 116242955 116243269 -29346019 + AluSg SINE Alu 1 314 0 741 355 122 23 chr10 116243289 116243994 -29345294 + L3 LINE CR1 22 796 -781 211 355 153 0 chr10 116243998 116244122 -29345166 - MIR3 SINE MIR -3 205 63 28 0 0 0 chr10 116244906 116244934 -29344354 + AT_rich Low_complexity Low_complexity 1 28 0 289 272 120 40 chr10 116245000 116245125 -29344163 - L2 LINE L2 -5 3308 3174 1754 183 33 3 chr10 116245351 116245685 -29343603 - MER2 DNA MER2_type 0 344 1 2228 72 0 0 chr10 116246400 116246678 -29342610 + AluY SINE Alu 34 311 0 345 115 0 0 chr10 116248420 116248472 -29340816 + Alu SINE Alu 1 52 -248 1745 165 3 32 chr10 116248472 116248787 -29340501 + AluSx SINE Alu 4 309 -3 483 295 109 55 chr10 116248818 116249121 -29340167 + LTR33 LTR ERVL 47 383 -138 2820 203 37 25 chr10 116249121 116249801 -29339487 + MER76 LTR ERV 1 688 0 483 295 109 55 chr10 116249801 116249948 -29339340 + LTR33 LTR ERVL 383 521 0 1330 197 176 53 chr10 116250036 116250452 -29338836 - MLT1C LTR MaLR 0 467 1 770 290 106 31 chr10 116250523 116250882 -29338406 + MLT1K LTR MaLR 67 452 -136 1029 179 5 41 chr10 116251034 116251229 -29338059 - MER5A DNA MER1_type 0 189 2 31 44 0 0 chr10 116251229 116251274 -29338014 + AT_rich Low_complexity Low_complexity 1 45 0 244 359 83 21 chr10 116251996 116252141 -29337147 + MIR3 SINE MIR 30 183 -25 584 278 40 12 chr10 116252259 116252432 -29336856 + MIR SINE MIR 33 210 -52 260 346 30 38 chr10 116253860 116253993 -29335295 + MIR SINE MIR 18 149 -113 351 0 0 0 chr10 116254686 116254725 -29334563 + (CA)n Simple_repeat Simple_repeat 2 40 0 510 358 42 47 chr10 116254913 116254943 -29334345 - MLT1K LTR MaLR -220 368 339 3447 150 0 0 chr10 116254943 116255470 -29333818 + MER1A DNA MER1_type 1 527 0 510 358 42 47 chr10 116255470 116255799 -29333489 - MLT1K LTR MaLR -249 339 11 2077 138 3 0 chr10 116256136 116256433 -29332855 + AluSq SINE Alu 1 298 -15 183 260 0 60 chr10 116256805 116256855 -29332433 - L2 LINE L2 -11 3302 3256 181 353 253 0 chr10 116256860 116257030 -29332258 - L2 LINE L2 -173 3140 2928 1270 241 54 8 chr10 116257033 116257385 -29331903 + MLT1A2 LTR MaLR 7 374 0 569 325 86 63 chr10 116257545 116258035 -29331253 - L2 LINE L2 -463 2851 2351 575 65 22 54 chr10 116258036 116258128 -29331160 - L1MA2 LINE L1 -518 5786 5698 * 1920 90 99 160 chr10 116258105 116258649 -29330639 + L1MA2 LINE L1 5794 6304 0 1473 305 67 70 chr10 116258662 116259723 -29329565 - L2 LINE L2 -963 2351 1294 348 93 0 0 chr10 116260737 116260791 -29328497 + L1PB1 LINE L1 6097 6150 -1 217 323 39 47 chr10 116261639 116261766 -29327522 + MIR3 SINE MIR 71 196 -12 236 311 151 42 chr10 116262048 116262167 -29327121 - L2 LINE L2 0 3272 3141 1400 321 59 17 chr10 116262274 116262986 -29326302 - L2 LINE L2 -193 3120 2384 1341 121 32 68 chr10 116262999 116263247 -29326041 + L1PB3 LINE L1 5907 6145 -9 586 313 85 9 chr10 116263292 116263503 -29325785 + MIR SINE MIR 29 255 -7 394 363 17 11 chr10 116263568 116263747 -29325541 - MIR SINE MIR -68 194 15 222 275 150 0 chr10 116264043 116264123 -29325165 + MIR SINE MIR 161 252 -10 267 237 0 0 chr10 116264259 116264318 -29324970 + CT-rich Low_complexity Low_complexity 2 60 0 1641 163 17 24 chr10 116264702 116264997 -29324291 - AluJo SINE Alu -14 298 6 250 158 0 0 chr10 116265889 116265927 -29323361 + MLT1D LTR MaLR 4 41 -464 750 126 8 8 chr10 116265927 116266054 -29323234 - AluSg/x SINE Alu 0 312 186 329 315 171 23 chr10 116267495 116267711 -29321577 + MIR SINE MIR 9 256 -6 340 300 46 58 chr10 116268772 116269012 -29320276 - L1M4 LINE L1 -2695 3451 3215 245 216 128 112 chr10 116269139 116269264 -29320024 - MIR SINE MIR -64 144 18 392 0 21 0 chr10 116271045 116271093 -29318195 + (TG)n Simple_repeat Simple_repeat 2 50 0 843 113 16 54 chr10 116271093 116271267 -29318021 - AluSq SINE Alu -27 286 118 238 316 4 31 chr10 116271485 116271644 -29317644 + CT-rich Low_complexity Low_complexity 1 154 0 924 149 0 118 chr10 116272154 116272475 -29316813 + AluSx SINE Alu 1 283 -19 852 157 0 97 chr10 116272227 116272475 -29316813 + AluSx SINE Alu 60 308 0 205 40 0 0 chr10 116272475 116272500 -29316788 + (TAAA)n Simple_repeat Simple_repeat 2 132 0 283 249 105 65 chr10 116272772 116273001 -29316287 + L1MC5 LINE L1 7260 7497 -464 2191 122 0 0 chr10 116273034 116273330 -29315958 + AluSc SINE Alu 1 296 -13 260 81 0 27 chr10 116273346 116273383 -29315905 + L1MC/D LINE L1 5492 5527 -2258 1327 224 37 43 chr10 116273634 116273986 -29315302 - MSTD LTR MaLR -44 352 3 1306 194 0 71 chr10 116274014 116274323 -29314965 + AluJo SINE Alu 3 289 -23 25 65 0 0 chr10 116274563 116274609 -29314679 + AT_rich Low_complexity Low_complexity 1 46 0 26 30 0 0 chr10 116274693 116274726 -29314562 + AT_rich Low_complexity Low_complexity 1 33 0 320 174 82 41 chr10 116275056 116275154 -29314134 + MIR SINE MIR 113 214 -48 456 286 37 0 chr10 116275380 116275505 -29313783 - MIR3 SINE MIR -1 207 79 809 150 0 45 chr10 116276595 116276728 -29312560 - FLAM_C SINE Alu -16 127 1 1435 123 0 0 chr10 116276926 116277121 -29312167 - AluSx SINE Alu -117 195 1 2086 213 25 53 chr10 116277122 116277611 -29311677 + MLT1D LTR MaLR 31 505 0 411 21 0 0 chr10 116279502 116279550 -29309738 + (TG)n Simple_repeat Simple_repeat 2 49 0 270 323 23 8 chr10 116279557 116279687 -29309601 - MLT1L LTR MaLR -2 613 482 1108 157 39 5 chr10 116280100 116280374 -29308914 + MER1B DNA MER1_type 15 339 0 21 36 0 0 chr10 116280437 116280465 -29308823 + AT_rich Low_complexity Low_complexity 1 28 0 39 74 0 0 chr10 116280577 116280658 -29308630 + AT_rich Low_complexity Low_complexity 1 81 0 216 0 0 0 chr10 116280769 116280793 -29308495 + (TA)n Simple_repeat Simple_repeat 2 25 0 461 329 86 45 chr10 116280822 116281135 -29308153 - L1MC/D LINE L1 -2155 5653 5328 1136 119 0 0 chr10 116281327 116281495 -29307793 + L1PB1 LINE L1 13 180 -6683 12711 136 45 17 chr10 116281537 116283627 -29305661 + L1PB1 LINE L1 726 2890 -3972 1986 125 21 0 chr10 116283627 116283914 -29305374 + AluSx SINE Alu 13 305 -7 12711 136 45 17 chr10 116283914 116284064 -29305224 + L1PB1 LINE L1 2890 3034 -3828 1851 155 117 8 chr10 116284105 116284472 -29304816 - MSTA LTR MaLR -21 407 1 2333 164 2 35 chr10 116284472 116284953 -29304335 + L1PB1 LINE L1 3031 3495 -3367 5325 154 33 11 chr10 116284971 116286093 -29303195 + L1PB1 LINE L1 5344 6511 -356 308 43 0 21 chr10 116286093 116286140 -29303148 + (TA)n Simple_repeat Simple_repeat 2 47 0 5325 154 33 11 chr10 116286140 116286505 -29302783 + L1PB1 LINE L1 6511 6867 0 329 299 22 66 chr10 116286711 116286848 -29302440 - L2 LINE L2 -15 3257 3127 1504 128 55 8 chr10 116286875 116287132 -29302156 + L1MA2 LINE L1 6016 6284 -20 9121 43 11 3 chr10 116287741 116289665 -29299623 - L1PA4 LINE L1 -2 6153 4221 291 307 131 26 chr10 116290892 116291045 -29298243 - MIR3 SINE MIR -20 188 20 261 268 0 0 chr10 116291398 116291480 -29297808 + (TACG)n Simple_repeat Simple_repeat 4 85 0 960 292 123 8 chr10 116292156 116292728 -29296560 - L2 LINE L2 -111 3202 2561 265 136 34 0 chr10 116292839 116292898 -29296390 + L1MA7 LINE L1 6229 6289 -2 2195 214 38 8 chr10 116293617 116294088 -29295200 - MLT1D LTR MaLR 0 505 21 397 253 0 26 chr10 116294435 116294589 -29294699 + (TA)n Simple_repeat Simple_repeat 1 150 0 1655 222 41 13 chr10 116294761 116295148 -29294140 + MLT2D LTR ERVL 3 400 -14 408 286 84 76 chr10 116295391 116295748 -29293540 + L1ME4a LINE L1 5461 5820 -301 234 276 24 47 chr10 116295823 116295950 -29293338 + L1ME4a LINE L1 5939 6062 -59 4065 240 51 67 chr10 116296389 116297975 -29291313 + L1M4c LINE L1 1044 2652 -3730 2392 102 0 0 chr10 116297975 116298288 -29291000 + AluSq SINE Alu 1 313 0 4065 240 51 67 chr10 116298288 116299825 -29289463 + L1M4c LINE L1 2652 4212 -2170 1139 149 0 11 chr10 116299843 116300017 -29289271 + AluSg/x SINE Alu 119 290 -22 2540 216 32 65 chr10 116300043 116300883 -29288405 + L1M4c LINE L1 4251 5062 -1320 267 31 0 0 chr10 116300884 116300916 -29288372 + (TG)n Simple_repeat Simple_repeat 2 33 0 25 31 0 0 chr10 116300991 116301023 -29288265 + AT_rich Low_complexity Low_complexity 1 32 0 1689 243 19 95 chr10 116302027 116302669 -29286619 - MLT1E LTR MaLR 0 593 1 673 254 12 6 chr10 116304007 116304180 -29285108 + MER5B DNA MER1_type 1 174 -4 205 228 18 18 chr10 116305148 116305205 -29284083 + (CATATA)n Simple_repeat Simple_repeat 6 62 0 222 244 0 0 chr10 116305350 116305391 -29283897 + MIR SINE MIR 67 107 -101 415 151 21 21 chr10 116306488 116306581 -29282707 - L1MC5 LINE L1 -49 7912 7820 414 250 17 10 chr10 116306787 116306927 -29282361 - LTR43 LTR ERV1 -207 472 180 1982 109 0 41 chr10 116307014 116307333 -29281955 + AluSx SINE Alu 1 307 0 689 306 56 22 chr10 116307499 116307819 -29281469 - HUERS-P3 LTR ERV1 -44 6632 6302 352 293 107 33 chr10 116307968 116308183 -29281105 - HUERS-P3 LTR ERV1 -5091 3828 3598 509 155 10 0 chr10 116308618 116308715 -29280573 - L1MC3 LINE L1 -108 7677 7580 6336 189 41 52 chr10 116308715 116310246 -29279042 - L1MC3 LINE L1 -425 7360 5846 5538 112 14 41 chr10 116310246 116311214 -29278074 + L1MA1 LINE L1 5220 6161 -141 253 179 36 0 chr10 116311181 116311237 -29278051 + L1MC3 LINE L1 6190 6247 -1538 * 1147 92 46 6 chr10 116311254 116311428 -29277860 + L1MA2 LINE L1 6116 6296 -8 37 0 0 0 chr10 116311432 116311469 -29277819 + AT_rich Low_complexity Low_complexity 1 37 0 1327 180 50 7 chr10 116311524 116311807 -29277481 - L1MA8 LINE L1 -1927 5858 5564 1803 161 81 26 chr10 116311811 116312097 -29277191 + L1MA8 LINE L1 5835 6160 -131 2259 188 26 2 chr10 116312097 116312513 -29276775 + MSTB LTR MaLR 1 426 0 1803 161 81 26 chr10 116312513 116312651 -29276637 + L1MA8 LINE L1 6160 6289 -2 336 133 0 0 chr10 116312654 116312714 -29276574 + (GGAA)n Simple_repeat Simple_repeat 3 62 0 239 102 0 41 chr10 116312704 116312753 -29276535 + (GGGGA)n Simple_repeat Simple_repeat 3 49 0 * 204 0 54 27 chr10 116313478 116313515 -29275773 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 429 290 88 38 chr10 116313722 116313994 -29275294 + MLT1L LTR MaLR 150 475 -140 2192 166 86 48 chr10 116313994 116314240 -29275048 + MLT2B1 LTR ERVL 1 236 -284 2200 117 3 0 chr10 116314240 116314540 -29274748 + AluSx SINE Alu 1 301 -11 2192 166 86 48 chr10 116314540 116314794 -29274494 + MLT2B1 LTR ERVL 236 520 0 429 290 88 38 chr10 116314794 116314939 -29274349 + MLT1L LTR MaLR 475 611 -4 360 0 0 0 chr10 116315792 116315832 -29273456 + (CA)n Simple_repeat Simple_repeat 1 40 0 342 0 0 0 chr10 116315834 116315872 -29273416 + (TC)n Simple_repeat Simple_repeat 2 39 0 396 0 0 0 chr10 116316127 116316171 -29273117 + (TG)n Simple_repeat Simple_repeat 2 45 0 1933 100 41 4 chr10 116316372 116316492 -29272796 + AluSc SINE Alu 1 115 -200 210 37 0 0 chr10 116316492 116316519 -29272769 + (CA)n Simple_repeat Simple_repeat 2 28 0 1933 100 41 4 chr10 116316519 116316703 -29272585 + AluSc SINE Alu 115 315 0 34 0 0 0 chr10 116317123 116317157 -29272131 + AT_rich Low_complexity Low_complexity 1 34 0 273 282 87 0 chr10 116318020 116318123 -29271165 + MIR SINE MIR 135 246 -16 2101 121 3 0 chr10 116319313 116319636 -29269652 + AluSq SINE Alu 1 324 0 221 318 22 116 chr10 116320110 116320377 -29268911 - L2 LINE L2 -85 3187 2946 3436 131 9 21 chr10 116320855 116321388 -29267900 - MER1A DNA MER1_type 0 527 1 443 247 134 65 chr10 116321415 116321606 -29267682 + MIR SINE MIR 1 212 -50 1854 227 37 9 chr10 116321606 116322060 -29267228 + MLT1C LTR MaLR 1 467 0 443 247 134 65 chr10 116322060 116322099 -29267189 + MIR SINE MIR 212 247 -15 2261 106 3 3 chr10 116322128 116322439 -29266849 - AluSx SINE Alu -1 311 1 295 247 0 26 chr10 116322941 116323018 -29266270 + GA-rich Low_complexity Low_complexity 2 76 0 456 265 29 15 chr10 116323394 116323530 -29265758 + MIR SINE MIR 77 214 -48 225 238 60 12 chr10 116323980 116324064 -29265224 + MIR SINE MIR 175 262 0 198 161 16 32 chr10 116325118 116325180 -29264108 + (TA)n Simple_repeat Simple_repeat 2 62 0 335 367 50 81 chr10 116325677 116325974 -29263314 - L2 LINE L2 -9 3263 2976 359 300 19 19 chr10 116326202 116326339 -29262949 - MER5B DNA MER1_type -9 180 33 423 0 0 0 chr10 116327156 116327203 -29262085 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 35660 99 19 8 chr10 116327203 116333271 -29256017 - L1PA6 LINE L1 -11 6143 11 1985 131 6 16 chr10 116333875 116334187 -29255101 - AluSp SINE Alu -4 309 1 301 115 0 51 chr10 116334903 116334915 -29254373 - Alu SINE Alu -249 51 40 1920 155 3 0 chr10 116334915 116335212 -29254076 - AluSx SINE Alu -10 302 5 301 115 0 51 chr10 116335212 116335262 -29254026 - Alu SINE Alu -260 40 1 1226 281 59 108 chr10 116335286 116336346 -29252942 + L2 LINE L2 2139 3138 -175 3516 199 6 3 chr10 116336368 116337012 -29252276 - MER82 DNA MER2_type 0 653 8 224 223 339 0 chr10 116337026 116337138 -29252150 + L2 LINE L2 3163 3312 -1 264 350 67 47 chr10 116337293 116337399 -29251889 - L2 LINE L2 -276 3037 2935 2220 114 0 19 chr10 116337399 116337715 -29251573 + AluSx SINE Alu 1 310 -2 264 350 67 47 chr10 116337715 116337942 -29251346 - L2 LINE L2 -378 2935 2700 2270 103 3 7 chr10 116338294 116338595 -29250693 + AluSx SINE Alu 7 306 -6 9851 199 27 16 chr10 116338776 116339249 -29250039 + L1PB4 LINE L1 2808 3274 -2882 2360 55 41 0 chr10 116339249 116339542 -29249746 + AluY SINE Alu 1 305 -6 9851 199 27 16 chr10 116339542 116340392 -29248896 + L1PB4 LINE L1 3274 4113 -2043 7284 50 0 0 chr10 116340392 116341398 -29247890 - L1PA5 LINE L1 -2 6152 5147 9851 199 27 16 chr10 116341398 116343392 -29245896 + L1PB4 LINE L1 4113 6152 -4 684 93 0 0 chr10 116344047 116344144 -29245144 + (TA)n Simple_repeat Simple_repeat 2 98 0 220 391 84 59 chr10 116344817 116345208 -29244080 - L2 LINE L2 0 3272 2872 21 71 0 0 chr10 116346318 116346360 -29242928 + AT_rich Low_complexity Low_complexity 1 42 0 30 27 0 0 chr10 116346522 116346559 -29242729 + AT_rich Low_complexity Low_complexity 1 37 0 2541 224 39 25 chr10 116346650 116347351 -29241937 - L1ME1 LINE L1 -188 5978 5271 1606 241 42 54 chr10 116347512 116348090 -29241198 + L1M4 LINE L1 2505 3075 -3071 275 146 36 0 chr10 116348081 116348136 -29241152 - L1M4 LINE L1 -3779 2367 2311 * 710 268 182 43 chr10 116348485 116348925 -29240363 + MLT1J LTR MaLR 3 503 -8 27 0 0 0 chr10 116349831 116349858 -29239430 + AT_rich Low_complexity Low_complexity 1 27 0 1122 255 82 48 chr10 116349888 116350300 -29238988 - MLT1C LTR MaLR -6 461 36 323 410 52 19 chr10 116350717 116351137 -29238151 + L3 LINE CR1 39 472 -1105 4053 169 78 16 chr10 116351622 116352434 -29236854 + MER6 DNA MER2_type 1 862 -3 2121 83 4 4 chr10 116352500 116352778 -29236510 - AluSc SINE Alu -4 305 28 273 268 80 0 chr10 116353050 116353162 -29236126 + L1ME4a LINE L1 5977 6097 -24 222 310 60 0 chr10 116353247 116353347 -29235941 - MIR SINE MIR 0 262 157 1990 145 3 0 chr10 116353705 116354012 -29235276 + AluSx SINE Alu 1 308 0 283 249 105 65 chr10 116354284 116354513 -29234775 + L1MC5 LINE L1 7260 7497 -464 2209 119 0 0 chr10 116354546 116354841 -29234447 + AluSc SINE Alu 1 295 -14 312 79 0 0 chr10 116354857 116354895 -29234393 + L1MC/D LINE L1 5492 5529 -2256 1221 214 135 88 chr10 116355187 116355629 -29233659 + MLT1D LTR MaLR 6 505 0 24 106 0 0 chr10 116356227 116356321 -29232967 + AT_rich Low_complexity Low_complexity 1 94 0 486 109 67 6 chr10 116356324 116356489 -29232799 + (TA)n Simple_repeat Simple_repeat 2 176 0 40 0 0 0 chr10 116356495 116356535 -29232753 + AT_rich Low_complexity Low_complexity 1 40 0 1393 223 77 94 chr10 116356782 116357081 -29232207 + MLT1E2 LTR MaLR 1 304 -322 4451 103 9 5 chr10 116357081 116357713 -29231575 - MER41B LTR ERV1 0 635 1 1393 223 77 94 chr10 116357713 116357765 -29231523 + MLT1E2 LTR MaLR 304 355 -271 2026 123 56 36 chr10 116357765 116358122 -29231166 - THE1B LTR MaLR 0 364 1 1393 223 77 94 chr10 116358122 116358400 -29230888 + MLT1E2 LTR MaLR 355 614 -12 1594 182 15 12 chr10 116358561 116359062 -29230226 + LTR35 LTR ERV1 70 611 -7 259 227 15 114 chr10 116359293 116359425 -29229863 - MLT1H LTR MaLR 0 549 431 2813 176 71 67 chr10 116361198 116361920 -29227368 + LTR8A LTR ERV1 3 727 0 326 259 18 80 chr10 116361964 116362076 -29227212 + MIR SINE MIR 86 190 -72 201 292 92 0 chr10 116362147 116362212 -29227076 - MIR SINE MIR -65 143 73 800 289 35 17 chr10 116362262 116362494 -29226794 - MIR SINE MIR -4 258 23 246 176 0 0 chr10 116363014 116363065 -29226223 + CT-rich Low_complexity Low_complexity 1 51 0 4095 160 38 4 chr10 116363430 116364117 -29225171 + MER50 LTR ERV1 2 711 -23 226 355 64 9 chr10 116364393 116364503 -29224785 + MLT1K LTR MaLR 2 117 -471 2281 175 40 101 chr10 116364750 116365424 -29223864 - MER92B LTR ERV1 0 636 4 210 236 0 0 chr10 116365540 116365595 -29223693 + GA-rich Low_complexity Low_complexity 3 57 0 2205 123 0 19 chr10 116367504 116367822 -29221466 - AluSx SINE Alu 0 312 1 268 281 22 11 chr10 116368690 116368779 -29220509 + T-rich Low_complexity Low_complexity 4 93 0 1869 160 7 3 chr10 116369157 116369464 -29219824 - AluJo SINE Alu -4 308 1 234 0 0 0 chr10 116370693 116370719 -29218569 + (A)n Simple_repeat Simple_repeat 1 26 0 782 258 161 14 chr10 116371842 116372059 -29217229 - MIR SINE MIR 0 262 14 408 341 47 10 chr10 116372474 116372677 -29216611 - MIR SINE MIR -10 252 38 853 304 62 48 chr10 116373065 116373549 -29215739 + LTR16C LTR ERVL 1 491 0 198 0 0 0 chr10 116374102 116374124 -29215164 + (TTA)n Simple_repeat Simple_repeat 2 23 0 1889 126 3 51 chr10 116374126 116374420 -29214868 - AluSx SINE Alu -32 280 1 22 0 0 0 chr10 116375012 116375034 -29214254 + AT_rich Low_complexity Low_complexity 1 22 0 245 329 60 40 chr10 116375253 116375402 -29213886 + L2 LINE L2 3115 3266 -6 252 357 85 8 chr10 116376748 116376877 -29212411 - L2 LINE L2 -16 3256 3118 229 368 0 11 chr10 116377060 116377155 -29212133 + MLT1K LTR MaLR 12 105 -483 441 0 0 0 chr10 116378674 116378723 -29210565 + (TG)n Simple_repeat Simple_repeat 2 50 0 254 315 33 0 chr10 116380990 116381082 -29208206 - LTR37B LTR ERV1 -356 112 18 28 29 0 0 chr10 116381165 116381200 -29208088 + AT_rich Low_complexity Low_complexity 1 35 0 344 253 0 10 chr10 116381221 116381320 -29207968 - MIR SINE MIR 0 262 165 286 271 0 0 chr10 116381889 116381959 -29207329 + MIR SINE MIR 180 249 -13 219 362 39 31 chr10 116382011 116382138 -29207150 - MIR SINE MIR -83 179 52 574 285 117 0 chr10 116382281 116382460 -29206828 + MER58A DNA MER1_type 25 224 0 465 252 148 19 chr10 116382471 116382626 -29206662 - MER5B DNA MER1_type -3 175 1 198 0 0 0 chr10 116383162 116383184 -29206104 + (TG)n Simple_repeat Simple_repeat 1 22 0 300 293 160 0 chr10 116384461 116384567 -29204721 - L2 LINE L2 -2 3270 3148 281 280 86 0 chr10 116385740 116385833 -29203455 + MIR SINE MIR 64 164 -98 2263 71 3 0 chr10 116385835 116386147 -29203141 + AluY SINE Alu 1 313 0 22 0 0 0 chr10 116387415 116387437 -29201851 + AT_rich Low_complexity Low_complexity 1 22 0 2095 128 0 0 chr10 116387536 116387818 -29201470 + AluSq SINE Alu 5 286 -27 2300 97 0 0 chr10 116388268 116388568 -29200720 + AluY SINE Alu 9 308 -3 363 91 0 18 chr10 116388864 116388919 -29200369 - L1PB1 LINE L1 -181 5970 5917 576 126 0 19 chr10 116388919 116389014 -29200274 + L1PB1 LINE L1 6051 6151 0 24 53 0 0 chr10 116389014 116389052 -29200236 + AT_rich Low_complexity Low_complexity 1 38 0 223 344 0 0 chr10 116390132 116390196 -29199092 + L2 LINE L2 3207 3270 -2 1330 180 163 12 chr10 116390723 116391067 -29198221 + MSTD LTR MaLR 1 396 0 6054 239 50 59 chr10 116391073 116392818 -29196470 + MSTD-int LTR MaLR 6 1735 0 335 241 205 0 chr10 116392818 116392930 -29196358 + MSTD LTR MaLR 1 135 -261 1082 185 20 10 chr10 116392956 116393151 -29196137 + MSTD LTR MaLR 200 396 0 223 254 34 0 chr10 116393476 116393535 -29195753 - L3 LINE CR1 -448 1129 1069 200 361 50 42 chr10 116393907 116394148 -29195140 + MIR SINE MIR 20 262 0 183 394 0 0 chr10 116395252 116395323 -29193965 + MIR SINE MIR 45 115 -93 2364 99 0 0 chr10 116395516 116395818 -29193470 - AluY SINE Alu -9 302 1 35 0 0 0 chr10 116397120 116397155 -29192133 + AT_rich Low_complexity Low_complexity 1 35 0 729 214 19 126 chr10 116398330 116398592 -29190696 + MIR SINE MIR 16 249 -13 555 294 35 53 chr10 116398627 116398909 -29190379 + Charlie8 DNA MER1_type 2 278 -2139 35 0 0 0 chr10 116399036 116399071 -29190217 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr10 116399300 116399323 -29189965 + AT_rich Low_complexity Low_complexity 1 23 0 303 317 71 58 chr10 116399421 116399583 -29189705 - MIR SINE MIR -2 260 93 1878 201 73 15 chr10 116399583 116400060 -29189228 - LTR22 LTR ERVK 0 509 5 303 317 71 58 chr10 116400060 116400121 -29189167 - MIR SINE MIR -169 93 34 21 0 0 0 chr10 116401028 116401049 -29188239 + AT_rich Low_complexity Low_complexity 1 21 0 273 343 40 55 chr10 116402564 116402791 -29186497 - MIR SINE MIR 0 262 32 1904 128 0 31 chr10 116402791 116403110 -29186178 - AluSx SINE Alu 0 314 5 273 343 40 55 chr10 116403110 116403126 -29186162 - MIR SINE MIR -230 32 17 246 287 70 17 chr10 116403470 116403585 -29185703 + MIR3 SINE MIR 37 157 -51 448 95 0 0 chr10 116403701 116403764 -29185524 - AluS SINE Alu -236 77 15 324 304 114 65 chr10 116404234 116404311 -29184977 + MIR SINE MIR 47 119 -143 1691 162 35 3 chr10 116404311 116404595 -29184693 + AluJb SINE Alu 5 297 -15 324 304 114 65 chr10 116404595 116404701 -29184587 + MIR SINE MIR 119 239 -23 187 319 0 0 chr10 116404667 116404714 -29184574 + L2 LINE L2 3251 3297 -16 * 221 309 37 0 chr10 116404910 116404991 -29184297 + L2 LINE L2 3230 3313 0 2164 108 0 0 chr10 116405340 116405628 -29183660 + AluSx SINE Alu 5 292 -20 277 336 66 0 chr10 116405771 116405893 -29183395 + MIR3 SINE MIR 68 197 -11 668 197 8 15 chr10 116406471 116406603 -29182685 + FLAM_C SINE Alu 1 131 -2 366 23 0 0 chr10 116406679 116406722 -29182566 + (CA)n Simple_repeat Simple_repeat 2 44 0 274 225 100 0 chr10 116407569 116407649 -29181639 + MER113 DNA MER1_type? 11 98 -423 2347 88 0 3 chr10 116408448 116408756 -29180532 + AluY SINE Alu 1 307 -4 1893 174 21 13 chr10 116409126 116409506 -29179782 - L1 LINE L1 -1019 6546 6164 1041 240 113 28 chr10 116409488 116409958 -29179330 - L1 LINE L1 -4024 3541 3032 * 1542 271 80 58 chr10 116410025 116411095 -29178193 - L1MEc LINE L1 -4406 1990 878 2128 138 0 0 chr10 116411095 116411407 -29177881 - AluSx SINE Alu 0 312 1 1542 271 80 58 chr10 116411407 116411789 -29177499 - L1MEc LINE L1 -5518 878 506 369 316 22 112 chr10 116412485 116412843 -29176445 - L3 LINE CR1 -147 1430 1105 745 186 0 92 chr10 116413639 116413758 -29175530 + L1MB2 LINE L1 5391 5448 -723 1524 209 32 3 chr10 116413758 116414041 -29175247 + AluJb SINE Alu 2 292 -20 745 186 0 92 chr10 116414041 116414209 -29175079 + L1MB2 LINE L1 5448 5630 -541 543 202 0 0 chr10 116414209 116414318 -29174970 + L1MB2 LINE L1 6063 6171 0 2044 167 35 32 chr10 116414755 116415305 -29173983 - MLT2A2 LTR ERVL 0 554 1 273 29 0 0 chr10 116415432 116415466 -29173822 + (GAAAA)n Simple_repeat Simple_repeat 4 37 0 366 85 0 0 chr10 116415473 116415532 -29173756 + (GGAA)n Simple_repeat Simple_repeat 4 62 0 318 87 0 0 chr10 116416041 116416087 -29173201 + (CA)n Simple_repeat Simple_repeat 1 46 0 433 324 84 9 chr10 116416113 116416326 -29172962 + MLT1K LTR MaLR 10 238 -350 244 292 139 0 chr10 116416427 116416499 -29172789 + MLT1K LTR MaLR 268 349 -239 339 239 53 53 chr10 116416733 116416846 -29172442 + L2 LINE L2 3197 3309 -4 461 241 74 116 chr10 116417118 116417334 -29171954 + MIR SINE MIR 44 250 -12 372 329 33 7 chr10 116418185 116418337 -29170951 + MIR SINE MIR 52 207 -55 847 208 121 10 chr10 116418444 116418651 -29170637 - L1MC3 LINE L1 -1584 6201 5972 720 211 50 13 chr10 116418649 116418854 -29170434 - L1MC3 LINE L1 -432 5732 5520 * 1718 263 36 51 chr10 116418886 116419411 -29169877 + MLT1E LTR MaLR 1 517 -76 353 218 10 0 chr10 116419414 116419507 -29169781 + LTR37A LTR ERV1 286 379 -47 1249 236 21 31 chr10 116419507 116419833 -29169455 - MLT2D LTR ERVL 0 414 92 393 279 126 57 chr10 116419945 116420262 -29169026 - L2 LINE L2 -275 3038 2702 224 303 0 0 chr10 116420341 116420407 -29168881 - MIR SINE MIR -137 125 60 2251 114 0 0 chr10 116421785 116422091 -29167197 - AluSx SINE Alu -6 306 1 662 257 23 42 chr10 116422176 116422390 -29166898 - MER63A DNA MER1_type 0 210 1 180 340 49 43 chr10 116422785 116422947 -29166341 + L2 LINE L2 2272 2434 -880 1755 205 90 76 chr10 116423265 116423374 -29165914 + MLT1F1 LTR MaLR 18 124 -443 1820 122 86 0 chr10 116423374 116423653 -29165635 - AluY SINE Alu -8 303 1 1755 205 90 76 chr10 116423653 116424085 -29165203 + MLT1F1 LTR MaLR 124 567 0 289 332 29 58 chr10 116424106 116424314 -29164974 + L2 LINE L2 2686 2887 -427 2168 94 0 10 chr10 116424533 116424830 -29164458 + AluSx SINE Alu 1 294 -18 1958 193 49 27 chr10 116425626 116426031 -29163257 + MLT2D LTR ERVL 1 414 0 274 286 93 29 chr10 116426141 116426281 -29163007 - MIR SINE MIR -5 257 109 225 220 20 0 chr10 116426290 116426340 -29162948 + A-rich Low_complexity Low_complexity 5 55 0 1872 127 0 42 chr10 116427051 116427357 -29161931 - AluSx SINE Alu 0 304 11 1730 168 24 3 chr10 116428190 116428487 -29160801 - AluJb SINE Alu -9 303 1 191 294 20 0 chr10 116428773 116428824 -29160464 + L2 LINE L2 3254 3305 -8 319 277 100 15 chr10 116430752 116430882 -29158406 + MIR SINE MIR 49 189 -73 237 313 73 0 chr10 116431782 116431878 -29157410 + MIR SINE MIR 95 197 -65 192 77 0 0 chr10 116432240 116432266 -29157022 + (TATG)n Simple_repeat Simple_repeat 4 29 0 2437 72 3 0 chr10 116432680 116432993 -29156295 + AluSp SINE Alu 1 314 0 212 185 19 0 chr10 116433055 116433109 -29156179 + (TATATG)n Simple_repeat Simple_repeat 3 57 0 1683 147 82 0 chr10 116433867 116434146 -29155142 - AluSg SINE Alu -8 302 1 314 295 74 0 chr10 116435410 116435532 -29153756 + L2 LINE L2 3168 3298 -15 2016 108 8 0 chr10 116436229 116436497 -29152791 - AluSx SINE Alu -19 293 24 768 158 12 91 chr10 116436505 116436670 -29152618 - FRAM SINE Alu -13 153 2 1217 266 93 30 chr10 116436742 116437234 -29152054 + LTR33A LTR ERVL 1 523 0 414 279 163 17 chr10 116437588 116437760 -29151528 - MIR3 SINE MIR -4 204 8 944 138 18 151 chr10 116438782 116439000 -29150288 - MER5A DNA MER1_type 0 189 1 217 276 0 0 chr10 116439224 116439282 -29150006 - L2 LINE L2 0 3313 3256 226 253 53 0 chr10 116440839 116440914 -29148374 + LTR48 LTR ERV1 96 174 -613 204 47 47 23 chr10 116441428 116441471 -29147817 + (TTTTTG)n Simple_repeat Simple_repeat 2 45 0 861 245 90 5 chr10 116443943 116444155 -29145133 + MIR SINE MIR 8 237 -25 38 22 0 0 chr10 116444198 116444243 -29145045 + AT_rich Low_complexity Low_complexity 1 45 0 183 257 121 71 chr10 116445435 116445575 -29143713 - MIR SINE MIR -65 197 51 363 44 0 0 chr10 116445583 116445628 -29143660 + (CA)n Simple_repeat Simple_repeat 1 45 0 254 169 34 0 chr10 116445803 116445862 -29143426 + (TATATG)n Simple_repeat Simple_repeat 1 61 0 383 268 96 35 chr10 116445887 116446085 -29143203 - L1MC5 LINE L1 -86 7875 7666 288 53 0 0 chr10 116446389 116446427 -29142861 + (CA)n Simple_repeat Simple_repeat 1 38 0 188 167 71 0 chr10 116447167 116447209 -29142079 + MIR SINE MIR 214 258 -4 386 300 135 0 chr10 116447280 116447450 -29141838 + MIR SINE MIR 54 246 -16 585 215 44 13 chr10 116447531 116447689 -29141599 - MER103 DNA DNA 0 166 4 1849 145 14 21 chr10 116447768 116448076 -29141212 - AluSx SINE Alu 0 306 1 2031 177 24 32 chr10 116448638 116449011 -29140277 + MER93b LTR ERV1 1 370 -3 216 288 0 17 chr10 116449231 116449290 -29139998 + MER5A DNA MER1_type 7 64 -125 * 235 269 0 0 chr10 116449258 116449310 -29139978 - MER5A DNA MER1_type -22 167 116 1409 82 0 0 chr10 116449336 116449506 -29139782 + AluY SINE Alu 127 296 -15 192 307 40 27 chr10 116449514 116449589 -29139699 + MER5A DNA MER1_type 108 183 -6 1178 269 120 72 chr10 116449832 116450342 -29138946 + MLT1H LTR MaLR 6 539 -10 353 289 10 0 chr10 116450471 116450575 -29138713 + MER94 DNA DNA 1 105 -29 1678 193 3 0 chr10 116450941 116451226 -29138062 + AluJo SINE Alu 1 286 -26 299 313 25 85 chr10 116452768 116452847 -29136441 + MER5A DNA MER1_type 1 83 -106 2597 64 0 0 chr10 116452847 116453158 -29136130 + AluY SINE Alu 1 311 0 299 313 25 85 chr10 116453158 116453279 -29136009 + MER5A DNA MER1_type 83 189 0 210 340 38 9 chr10 116453830 116453936 -29135352 + L2 LINE L2 2237 2345 -969 180 0 0 0 chr10 116453965 116453985 -29135303 + (A)n Simple_repeat Simple_repeat 1 20 0 240 372 36 15 chr10 116454413 116454550 -29134738 + L2 LINE L2 2920 3059 -213 2086 144 0 0 chr10 116454917 116455222 -29134066 - AluSx SINE Alu -7 305 1 194 268 18 0 chr10 116455824 116455880 -29133408 - L2 LINE L2 -2 3270 3214 200 333 60 43 chr10 116456067 116456184 -29133104 - L2 LINE L2 -219 3053 2935 1877 134 41 10 chr10 116457131 116457422 -29131866 + AluSx SINE Alu 9 308 -4 1032 112 20 0 chr10 116458585 116458737 -29130551 - L1MA5A LINE L1 -3 6294 6140 195 233 100 33 chr10 116458861 116458921 -29130367 - MIR3 SINE MIR -133 75 12 250 248 202 46 chr10 116459478 116459587 -29129701 + L2 LINE L2 3185 3310 -3 346 270 199 6 chr10 116460234 116460396 -29128892 - MIR SINE MIR -29 233 38 199 313 96 61 chr10 116460540 116460655 -29128633 + L2 LINE L2 3185 3303 -10 236 310 62 23 chr10 116460740 116460869 -29128419 - MIR SINE MIR -43 219 86 1855 150 0 0 chr10 116461146 116461419 -29127869 - AluSx SINE Alu -39 273 1 2196 104 0 0 chr10 116462499 116462827 -29126461 - AluSc SINE Alu 0 328 1 1758 144 61 7 chr10 116463368 116463646 -29125642 + AluSx SINE Alu 1 293 -19 285 146 0 0 chr10 116463646 116463694 -29125594 + (GGA)n Simple_repeat Simple_repeat 2 49 0 200 182 0 0 chr10 116463828 116463861 -29125427 + (CA)n Simple_repeat Simple_repeat 2 34 0 2259 86 0 71 chr10 116464021 116464357 -29124931 - AluSq SINE Alu -1 312 1 21 0 0 0 chr10 116464570 116464591 -29124697 + AT_rich Low_complexity Low_complexity 1 21 0 608 310 80 35 chr10 116465905 116466244 -29123044 - MLT1I LTR MaLR -55 354 1 426 20 0 0 chr10 116466780 116466831 -29122457 + (CA)n Simple_repeat Simple_repeat 2 52 0 417 311 50 67 chr10 116468189 116468549 -29120739 + MLT1K LTR MaLR 174 527 -61 189 268 36 0 chr10 116469141 116469197 -29120091 - MIR SINE MIR -48 214 157 * 335 186 14 14 chr10 116469195 116469265 -29120023 + MIR SINE MIR 83 152 -110 219 245 0 19 chr10 116470465 116470518 -29118770 + GA-rich Low_complexity Low_complexity 4 55 0 510 70 0 0 chr10 116470519 116470590 -29118698 + (CA)n Simple_repeat Simple_repeat 1 71 0 2906 95 22 0 chr10 116470924 116471291 -29117997 + THE1C LTR MaLR 1 375 0 495 319 63 16 chr10 116471740 116471931 -29117357 + MIR SINE MIR 27 226 -36 185 326 43 11 chr10 116472856 116472948 -29116340 - MIR SINE MIR -42 220 126 942 261 74 7 chr10 116472958 116473331 -29115957 - LTR16A LTR ERVL -8 442 7 574 289 29 53 chr10 116474520 116474766 -29114522 + MIR SINE MIR 13 252 -10 2084 117 7 7 chr10 116475065 116475365 -29113923 + AluSx SINE Alu 1 300 -12 524 291 53 13 chr10 116475499 116475650 -29113638 + MIR SINE MIR 20 176 -86 805 45 9 0 chr10 116476472 116476583 -29112705 - LTR9B LTR ERV1 -86 558 447 264 303 13 0 chr10 116476594 116476670 -29112618 + C-rich Low_complexity Low_complexity 4 80 0 1990 109 44 19 chr10 116476672 116476992 -29112296 - LTR9B LTR ERV1 -196 448 121 194 273 13 52 chr10 116477123 116477200 -29112088 + L2 LINE L2 2914 2987 -326 191 324 44 15 chr10 116477446 116477477 -29111811 + L2 LINE L2 3214 3243 -70 869 266 104 30 chr10 116477477 116477909 -29111379 - LTR16B LTR ERVL 0 464 1 191 324 44 15 chr10 116477909 116477945 -29111343 + L2 LINE L2 3243 3283 -30 321 303 87 14 chr10 116477945 116478163 -29111125 + L2 LINE L2 2712 2945 -369 21 36 0 0 chr10 116478506 116478534 -29110754 + AT_rich Low_complexity Low_complexity 1 28 0 1991 192 25 32 chr10 116479322 116479728 -29109560 + MER67D LTR ERV1 14 416 -98 807 135 0 0 chr10 116479801 116479912 -29109376 + FLAM_C SINE Alu 3 113 -30 293 268 70 42 chr10 116480192 116480334 -29108954 + MIR SINE MIR 116 261 -1 350 298 21 0 chr10 116480359 116480453 -29108835 + MIR3 SINE MIR 67 162 -46 455 236 186 19 chr10 116480621 116480782 -29108506 + MIR SINE MIR 7 194 -68 269 268 0 24 chr10 116481195 116481216 -29108072 + CT-rich Low_complexity Low_complexity 2 22 -59 2220 112 7 0 chr10 116481216 116481520 -29107768 - AluSq SINE Alu -7 306 1 269 268 0 24 chr10 116481520 116481580 -29107708 + CT-rich Low_complexity Low_complexity 22 81 0 21 0 0 0 chr10 116483402 116483423 -29105865 + AT_rich Low_complexity Low_complexity 1 21 0 247 365 0 0 chr10 116483990 116484086 -29105202 + MIR3 SINE MIR 96 191 -17 493 273 93 93 chr10 116484248 116484669 -29104619 + MLT1K LTR MaLR 69 560 -28 188 356 189 25 chr10 116485690 116486252 -29103036 + L2 LINE L2 2086 2739 -575 2309 114 0 0 chr10 116486282 116486581 -29102707 + AluSc SINE Alu 6 304 -5 463 224 239 35 chr10 116486917 116487118 -29102170 - MIR SINE MIR 0 262 21 2355 80 3 13 chr10 116487511 116487811 -29101477 - AluSg SINE Alu -13 297 1 234 218 13 103 chr10 116487905 116487921 -29101367 - L2 LINE L2 0 3313 3297 2137 109 0 57 chr10 116487921 116488252 -29101036 - AluSx SINE Alu 0 312 1 234 218 13 103 chr10 116488252 116488313 -29100975 - L2 LINE L2 -16 3297 3243 555 304 33 0 chr10 116488378 116488559 -29100729 - L2 LINE L2 -229 3084 2898 2314 122 0 0 chr10 116488616 116488928 -29100360 - AluSx SINE Alu 0 312 1 203 254 16 32 chr10 116488989 116489052 -29100236 + (CATATA)n Simple_repeat Simple_repeat 4 65 0 423 0 0 0 chr10 116489468 116489515 -29099773 + (TG)n Simple_repeat Simple_repeat 2 48 0 359 326 47 16 chr10 116489672 116489801 -29099487 - MER5A DNA MER1_type 0 189 57 294 238 127 63 chr10 116490619 116490745 -29098543 - MIR3 SINE MIR -66 142 9 596 292 35 31 chr10 116492103 116492329 -29096959 + MIR SINE MIR 12 238 -24 2270 114 0 3 chr10 116494031 116494338 -29094950 + AluSc SINE Alu 1 306 -3 402 320 0 23 chr10 116494626 116494754 -29094534 - MIR SINE MIR -56 152 28 294 307 26 48 chr10 116494761 116494923 -29094365 + MIR SINE MIR 19 175 -83 22 0 0 0 chr10 116496330 116496352 -29092936 + AT_rich Low_complexity Low_complexity 1 22 0 283 291 45 87 chr10 116497090 116497428 -29091860 - L2 LINE L2 -212 3060 2736 1657 168 78 12 chr10 116497449 116497782 -29091506 - L1MA5 LINE L1 -6 6294 5940 207 259 199 0 chr10 116497803 116497934 -29091354 - L2 LINE L2 -571 2743 2587 207 0 0 0 chr10 116497934 116497957 -29091331 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 205 219 137 55 chr10 116498485 116498558 -29090730 + L2 LINE L2 3151 3229 -43 262 324 42 35 chr10 116498617 116498759 -29090529 - MIR SINE MIR -47 215 73 861 242 0 0 chr10 116500379 116500557 -29088731 + AluJb SINE Alu 135 312 0 2188 134 99 9 chr10 116500674 116501018 -29088270 - THE1C LTR MaLR 0 375 1 302 155 12 60 chr10 116502685 116502769 -29086519 - L1ME4a LINE L1 -43 6078 5999 351 292 31 23 chr10 116503085 116503215 -29086073 + MIR3 SINE MIR 78 208 0 1712 113 25 0 chr10 116504065 116504305 -29084983 + AluSc SINE Alu 61 306 -3 185 356 59 42 chr10 116505897 116506015 -29083273 - L2 LINE L2 -10 3262 3143 36 82 0 0 chr10 116506019 116506104 -29083184 + AT_rich Low_complexity Low_complexity 1 85 0 619 230 84 68 chr10 116507340 116507572 -29081716 + MIR SINE MIR 19 257 -5 1761 247 62 87 chr10 116508425 116508649 -29080639 - L1ME3A LINE L1 0 6406 6178 2132 109 0 3 chr10 116508649 116508932 -29080356 - AluSg SINE Alu -28 282 1 1761 247 62 87 chr10 116508932 116509438 -29079850 - L1ME3A LINE L1 -228 6178 5701 2079 115 0 75 chr10 116509438 116509760 -29079528 - AluSx SINE Alu -14 298 1 1761 247 62 87 chr10 116509760 116509959 -29079329 - L1ME3A LINE L1 -705 5701 5499 36 70 0 0 chr10 116509974 116510045 -29079243 + AT_rich Low_complexity Low_complexity 1 71 0 254 259 35 0 chr10 116510149 116510234 -29079054 - L1ME3A LINE L1 -923 5459 5372 1973 129 44 7 chr10 116510249 116510544 -29078744 + AluSx SINE Alu 1 306 -6 959 260 30 87 chr10 116510609 116510685 -29078603 - L1ME3A LINE L1 -1050 5332 5253 2103 104 21 3 chr10 116510685 116510974 -29078314 + AluSx SINE Alu 5 298 -14 959 260 30 87 chr10 116510974 116511654 -29077634 - L1ME3A LINE L1 -1129 5253 4619 243 0 0 0 chr10 116511657 116511684 -29077604 + (CA)n Simple_repeat Simple_repeat 2 28 0 655 262 132 34 chr10 116511698 116512076 -29077212 + L1M4 LINE L1 4710 5124 -1022 21 0 0 0 chr10 116512126 116512147 -29077141 + AT_rich Low_complexity Low_complexity 1 21 0 1425 163 44 20 chr10 116512150 116512402 -29076886 - AluJo SINE Alu -27 285 28 285 292 136 51 chr10 116512417 116512904 -29076384 - L1ME3A LINE L1 -4166 2397 1870 3957 146 66 7 chr10 116512995 116513707 -29075581 + LTR1 LTR ERV1 32 785 0 487 283 72 40 chr10 116513799 116514264 -29075024 - L1ME3A LINE L1 -4534 1769 1030 250 290 0 0 chr10 116515110 116515172 -29074116 + CT-rich Low_complexity Low_complexity 3 64 0 700 227 7 13 chr10 116515644 116515794 -29073494 + MER5A DNA MER1_type 41 189 0 21 0 0 0 chr10 116516522 116516543 -29072745 + AT_rich Low_complexity Low_complexity 1 21 0 220 333 0 0 chr10 116517103 116517151 -29072137 - L2 LINE L2 -86 3186 3139 743 278 6 0 chr10 116517712 116517885 -29071403 - MER58B DNA MER1_type 0 341 168 270 339 18 9 chr10 116518002 116518114 -29071174 + MIR SINE MIR 150 262 0 531 278 23 12 chr10 116518453 116518626 -29070662 - MIR SINE MIR -11 251 77 1742 160 13 20 chr10 116519122 116519422 -29069866 - AluSx SINE Alu -14 298 1 2147 93 40 20 chr10 116520536 116520837 -29068451 + AluY SINE Alu 1 307 -4 473 286 34 34 chr10 116521017 116521192 -29068096 - MER5B DNA MER1_type -1 177 3 4804 114 4 16 chr10 116521196 116521880 -29067408 + L1PB3 LINE L1 5474 6149 -5 28 48 0 0 chr10 116521880 116521922 -29067366 + AT_rich Low_complexity Low_complexity 1 42 0 261 0 0 0 chr10 116521929 116521958 -29067330 + (TG)n Simple_repeat Simple_repeat 2 30 0 525 305 66 18 chr10 116521997 116522223 -29067065 + MIR SINE MIR 16 252 -10 189 322 105 49 chr10 116522322 116522465 -29066823 + L2 LINE L2 2693 2843 -471 246 242 152 0 chr10 116522516 116522582 -29066706 + L2 LINE L2 2933 3008 -264 330 308 68 15 chr10 116523817 116523950 -29065338 - MIR3 SINE MIR -11 197 58 1474 118 61 0 chr10 116524532 116524760 -29064528 - L1MA6 LINE L1 0 6300 6059 826 104 0 0 chr10 116524927 116525033 -29064255 + AluSg/x SINE Alu 193 298 -14 313 324 135 5 chr10 116525841 116526026 -29063262 - MIR SINE MIR -2 260 52 318 189 162 0 chr10 116526728 116526802 -29062486 - MER96 DNA MER1_type? -13 162 77 240 304 51 0 chr10 116526978 116527074 -29062214 + L2 LINE L2 2913 3020 -252 353 286 78 29 chr10 116527353 116527559 -29061729 + L1MC4a LINE L1 5694 5909 -1899 2384 89 0 0 chr10 116528628 116528930 -29060358 + AluY SINE Alu 1 302 -9 725 160 0 62 chr10 116529638 116529782 -29059506 - FLAM_A SINE Alu 0 142 8 269 222 67 11 chr10 116529799 116529889 -29059399 - L1MC5 LINE L1 -36 7925 7831 356 232 46 67 chr10 116529929 116530021 -29059267 - L1MC5 LINE L1 -234 7727 7635 1651 201 23 104 chr10 116530021 116530101 -29059187 + MLT2B1 LTR ERVL 1 86 -434 2347 95 0 7 chr10 116530101 116530407 -29058881 - AluY SINE Alu -7 304 1 1651 201 23 104 chr10 116530407 116530822 -29058466 + MLT2B1 LTR ERVL 86 447 -73 2099 117 0 44 chr10 116530822 116531138 -29058150 - AluSx SINE Alu -10 302 1 1651 201 23 104 chr10 116531138 116531207 -29058081 + MLT2B1 LTR ERVL 447 520 0 356 232 46 67 chr10 116531207 116531308 -29057980 - L1MC5 LINE L1 -326 7635 7538 189 74 0 0 chr10 116532176 116532203 -29057085 + (CAAAAA)n Simple_repeat Simple_repeat 4 30 0 234 0 0 0 chr10 116533510 116533536 -29055752 + (CAA)n Simple_repeat Simple_repeat 2 27 0 402 352 36 32 chr10 116534712 116534959 -29054329 - L3 LINE CR1 -41 1536 1289 2105 118 10 0 chr10 116534964 116535261 -29054027 - AluSx SINE Alu -12 300 1 342 277 94 94 chr10 116537305 116537404 -29051884 - MIR SINE MIR 0 262 164 2213 99 3 3 chr10 116537404 116537697 -29051591 - AluSc SINE Alu -16 293 1 342 277 94 94 chr10 116537697 116537832 -29051456 - MIR SINE MIR -97 165 28 2394 84 0 40 chr10 116538302 116538625 -29050663 + AluY SINE Alu 1 310 -1 1951 191 3 8 chr10 116539964 116540325 -29048963 + MLT1A1 LTR MaLR 5 363 -2 228 122 0 0 chr10 116540893 116540934 -29048354 + (TC)n Simple_repeat Simple_repeat 1 41 0 3238 118 6 30 chr10 116540967 116541476 -29047812 + LOR1a LTR ERV1 1 497 0 501 271 8 16 chr10 116542014 116542136 -29047152 - MIR3 SINE MIR -30 178 58 239 191 16 16 chr10 116544072 116544135 -29045153 + (TCCA)n Simple_repeat Simple_repeat 4 66 0 2320 105 0 6 chr10 116546113 116546427 -29042861 + AluSx SINE Alu 1 312 0 29 47 0 0 chr10 116546812 116546855 -29042433 + AT_rich Low_complexity Low_complexity 1 43 0 1109 159 14 0 chr10 116547550 116547757 -29041531 - L1MA7 LINE L1 -235 6056 5847 2264 107 0 16 chr10 116548321 116548629 -29040659 + AluSc SINE Alu 1 303 -6 524 321 83 64 chr10 116549558 116550117 -29039171 - L2 LINE L2 -24 3289 2697 644 254 81 39 chr10 116550124 116550385 -29038903 + L1ME1 LINE L1 5909 6334 0 466 315 59 25 chr10 116550387 116550590 -29038698 - L2 LINE L2 -618 2696 2487 185 289 0 0 chr10 116550837 116550882 -29038406 + L2 LINE L2 3261 3305 -8 291 82 102 0 chr10 116551664 116551713 -29037575 - MER58A DNA MER1_type -1 223 170 * 931 242 14 9 chr10 116551705 116551916 -29037372 - MER58A DNA MER1_type -10 214 3 473 220 50 88 chr10 116552984 116553166 -29036122 - MIR SINE MIR -70 192 18 324 320 56 34 chr10 116553638 116553816 -29035472 - MIR SINE MIR -46 216 35 264 299 77 8 chr10 116553887 116554004 -29035284 - MIR SINE MIR -35 227 103 1657 146 0 90 chr10 116556308 116556629 -29032659 - AluJb SINE Alu -15 297 6 818 229 17 0 chr10 116556727 116556906 -29032382 + L1MB8 LINE L1 5991 6172 -6 727 191 52 0 chr10 116556961 116557097 -29032191 + MER46B DNA MER2_type 2 19 -217 383 230 15 7 chr10 116557099 116557234 -29032054 + L1MA4 LINE L1 6165 6300 0 1279 123 14 0 chr10 116557255 116557475 -29031813 + MER46B DNA MER2_type 14 236 0 482 293 20 13 chr10 116557531 116557681 -29031607 - MIR SINE MIR -111 151 1 271 286 0 29 chr10 116557790 116557860 -29031428 - L2 LINE L2 -7 3306 3239 1682 152 80 0 chr10 116558525 116558814 -29030474 - AluSx SINE Alu 0 312 1 534 320 65 7 chr10 116559740 116559959 -29029329 + MIR SINE MIR 34 262 0 1932 88 28 0 chr10 116561475 116561747 -29027541 + AluSg SINE Alu 26 304 0 579 328 34 5 chr10 116561923 116562127 -29027161 - MIR SINE MIR -38 224 15 424 289 228 7 chr10 116564078 116564227 -29025061 + MER5A DNA MER1_type 8 189 0 274 237 229 15 chr10 116564809 116564940 -29024348 - L3b LINE CR1 -101 1482 1324 1184 142 0 5 chr10 116565232 116565422 -29023866 + MER2 DNA MER2_type 7 195 -150 21 71 0 0 chr10 116565425 116565467 -29023821 + AT_rich Low_complexity Low_complexity 1 42 0 378 316 68 55 chr10 116565628 116565954 -29023334 + MLT1K LTR MaLR 173 502 -86 696 280 106 8 chr10 116565960 116566196 -29023092 + MIR SINE MIR 1 259 -3 21 0 0 0 chr10 116566333 116566354 -29022934 + AT_rich Low_complexity Low_complexity 1 21 0 226 228 53 0 chr10 116566454 116566511 -29022777 + L2 LINE L2 2737 2796 -518 21 0 0 0 chr10 116566966 116566987 -29022301 + AT_rich Low_complexity Low_complexity 1 21 0 345 298 26 55 chr10 116567386 116567551 -29021737 - MIR3 SINE MIR -52 156 31 259 274 16 16 chr10 116568570 116568632 -29020656 + MIR SINE MIR 21 82 -126 2308 104 0 0 chr10 116568677 116568984 -29020304 + AluSg SINE Alu 1 307 -3 675 117 58 0 chr10 116570459 116570613 -29018675 + GA-rich Low_complexity Low_complexity 3 165 0 2125 109 0 39 chr10 116571457 116571768 -29017520 - AluSq SINE Alu -14 299 1 661 194 101 7 chr10 116571780 116571919 -29017369 - FRAM SINE Alu -25 151 1 276 30 0 0 chr10 116572513 116572546 -29016742 + (TG)n Simple_repeat Simple_repeat 1 33 0 210 167 0 0 chr10 116572681 116572717 -29016571 + (TA)n Simple_repeat Simple_repeat 1 36 0 210 150 0 0 chr10 116573355 116573395 -29015893 + (TCCC)n Simple_repeat Simple_repeat 4 43 0 225 0 0 0 chr10 116573612 116573637 -29015651 + (CAAAAA)n Simple_repeat Simple_repeat 2 26 0 2633 49 0 0 chr10 116573711 116574015 -29015273 - AluY SINE Alu -7 304 1 215 91 0 68 chr10 116574062 116574106 -29015182 + (TTA)n Simple_repeat Simple_repeat 2 42 0 1838 128 52 3 chr10 116574434 116574723 -29014565 + AluSg SINE Alu 1 303 -7 506 317 144 40 chr10 116574922 116575462 -29013826 + L2 LINE L2 2710 3304 -9 301 335 23 46 chr10 116576226 116576303 -29012985 + MIR SINE MIR 48 125 -137 3066 134 2 33 chr10 116576303 116576816 -29012472 - LOR1a LTR ERV1 0 497 1 301 335 23 46 chr10 116576816 116576911 -29012377 + MIR SINE MIR 125 216 -46 359 255 10 10 chr10 116577444 116577546 -29011742 + MLT1L LTR MaLR 441 542 -73 227 289 149 25 chr10 116577831 116577952 -29011336 - MIR SINE MIR -10 252 117 606 231 49 36 chr10 116578150 116578199 -29011089 + L1ME LINE L1 5562 5609 -512 1521 129 4 17 chr10 116578199 116578431 -29010857 + AluSq SINE Alu 83 311 -2 606 231 49 36 chr10 116578431 116578606 -29010682 + L1ME LINE L1 5609 5789 -332 859 161 42 6 chr10 116578677 116578845 -29010443 + L1MD3 LINE L1 7822 7995 0 2196 98 20 7 chr10 116580021 116580318 -29008970 - AluSg SINE Alu -9 301 1 711 170 0 0 chr10 116581122 116581228 -29008060 + AluSq/x SINE Alu 2 107 -205 377 91 227 15 chr10 116581957 116582023 -29007265 + MADE1 DNA Mariner 1 80 0 5321 64 143 49 chr10 116582585 116583340 -29005948 - LTR12 LTR ERV1 0 826 1 292 296 10 0 chr10 116583387 116583485 -29005803 + GA-rich Low_complexity Low_complexity 2 100 0 2258 109 7 0 chr10 116583674 116583978 -29005310 - AluSc SINE Alu -3 306 1 799 302 83 36 chr10 116584107 116584551 -29004737 + L2 LINE L2 2849 3313 0 201 274 159 35 chr10 116584570 116584683 -29004605 + MIR3 SINE MIR 45 171 -37 594 283 44 44 chr10 116585711 116586004 -29003284 + L1ME LINE L1 5346 5638 -483 261 0 0 0 chr10 116586388 116586417 -29002871 + (CA)n Simple_repeat Simple_repeat 2 30 0 840 124 58 36 chr10 116587316 116587453 -29001835 + FLAM_C SINE Alu 3 142 -1 216 0 0 0 chr10 116587663 116587687 -29001601 + (CA)n Simple_repeat Simple_repeat 1 24 0 1503 211 38 26 chr10 116588077 116588494 -29000794 - Charlie4a DNA MER1_type -18 490 69 2169 101 14 0 chr10 116588494 116588816 -29000472 + AluSg SINE Alu 1 326 0 1917 157 0 0 chr10 116589125 116589436 -28999852 + AluSx SINE Alu 1 311 0 2101 117 0 3 chr10 116589535 116589817 -28999471 + AluSq SINE Alu 1 281 -32 270 0 0 0 chr10 116589827 116589857 -28999431 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 2131 129 0 0 chr10 116589916 116590219 -28999069 + AluSx SINE Alu 1 303 -9 180 0 0 0 chr10 116590391 116590411 -28998877 + (TTG)n Simple_repeat Simple_repeat 2 21 0 198 0 0 0 chr10 116590453 116590475 -28998813 + (T)n Simple_repeat Simple_repeat 1 22 0 276 91 0 0 chr10 116590627 116590671 -28998617 + (A)n Simple_repeat Simple_repeat 1 44 0 437 242 170 33 chr10 116591004 116591072 -28998216 + MER5A DNA MER1_type 9 66 -123 2626 52 0 0 chr10 116591072 116591379 -28997909 + AluY SINE Alu 1 307 -4 437 242 170 33 chr10 116591379 116591463 -28997825 + MER5A DNA MER1_type 66 182 -7 553 323 43 83 chr10 116591550 116591618 -28997670 - L2 LINE L2 -6 3307 3238 971 216 12 0 chr10 116591618 116591785 -28997503 - FAM SINE Alu -6 169 1 553 323 43 83 chr10 116591785 116592297 -28996991 - L2 LINE L2 -75 3238 2751 1711 92 0 0 chr10 116592307 116592525 -28996763 - AluSc SINE Alu -19 290 73 224 279 54 54 chr10 116593356 116593467 -28995821 - MIR SINE MIR -10 252 142 * 262 299 94 26 chr10 116593455 116593572 -28995716 + MIR SINE MIR 58 182 -80 28 71 0 0 chr10 116593968 116594024 -28995264 + AT_rich Low_complexity Low_complexity 1 56 0 2340 65 58 3 chr10 116595295 116595589 -28993699 + AluY SINE Alu 1 310 -1 208 342 53 43 chr10 116595643 116595830 -28993458 + L2 LINE L2 2848 3036 -236 201 226 10 20 chr10 116596114 116596216 -28993072 + GA-rich Low_complexity Low_complexity 2 102 0 1954 141 37 3 chr10 116597106 116597403 -28991885 + AluSc SINE Alu 1 307 -2 182 173 0 19 chr10 116597891 116597943 -28991345 + (CAT)n Simple_repeat Simple_repeat 3 53 0 239 284 0 49 chr10 116598117 116598198 -28991090 + L2 LINE L2 654 730 -2584 22 0 0 0 chr10 116598387 116598409 -28990879 + AT_rich Low_complexity Low_complexity 1 22 0 222 273 121 24 chr10 116598897 116599062 -28990226 + MIR SINE MIR 82 262 0 2013 87 87 0 chr10 116599155 116599430 -28989858 + AluSq SINE Alu 1 299 -14 21 0 0 0 chr10 116600868 116600889 -28988399 + AT_rich Low_complexity Low_complexity 1 21 0 206 191 24 0 chr10 116601117 116601159 -28988129 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 264 100 0 0 chr10 116601304 116601344 -28987944 + (TG)n Simple_repeat Simple_repeat 2 41 0 22 0 0 0 chr10 116601691 116601713 -28987575 + AT_rich Low_complexity Low_complexity 1 22 0 1706 123 55 0 chr10 116601726 116601962 -28987326 + AluSx SINE Alu 4 252 -60 240 313 12 0 chr10 116602184 116602264 -28987024 - L1MC/D LINE L1 -1892 5916 5836 995 159 12 12 chr10 116602983 116603146 -28986142 + AluJo SINE Alu 7 169 -143 674 194 0 0 chr10 116603146 116603254 -28986034 - AluJo/FLAM SINE Alu -203 109 2 2117 122 10 13 chr10 116603471 116603774 -28985514 + AluSx SINE Alu 1 302 -10 1140 46 8 0 chr10 116603794 116603925 -28985363 + AluY SINE Alu 1 132 -179 2161 109 7 3 chr10 116603938 116604240 -28985048 + AluY SINE Alu 1 303 -8 1302 219 29 98 chr10 116604409 116604807 -28984481 - MLT2B1 LTR ERVL -74 446 85 2352 95 0 7 chr10 116604807 116605113 -28984175 + AluY SINE Alu 1 304 -7 1302 219 29 98 chr10 116605113 116605193 -28984095 - MLT2B1 LTR ERVL -435 85 1 273 206 43 43 chr10 116605193 116605285 -28984003 + L1MC5 LINE L1 7636 7727 -234 302 214 61 31 chr10 116605325 116605423 -28983865 + L1MC5 LINE L1 7831 7931 -30 783 160 0 62 chr10 116605432 116605576 -28983712 + FLAM_A SINE Alu 8 142 0 2281 103 3 0 chr10 116606284 116606585 -28982703 - AluY SINE Alu -9 302 1 211 326 74 52 chr10 116606585 116606720 -28982568 - MIR SINE MIR -97 165 28 2247 84 0 78 chr10 116607190 116607525 -28981763 + AluY SINE Alu 1 309 -2 2131 188 3 8 chr10 116608864 116609225 -28980063 + MLT1A1 LTR MaLR 5 363 -2 228 122 0 0 chr10 116609793 116609834 -28979454 + (TC)n Simple_repeat Simple_repeat 1 41 0 3484 120 6 30 chr10 116609867 116610376 -28978912 + LOR1a LTR ERV1 1 497 0 492 271 8 16 chr10 116610914 116611036 -28978252 - MIR3 SINE MIR -30 178 58 239 191 16 16 chr10 116612972 116613035 -28976253 + (TCCA)n Simple_repeat Simple_repeat 4 66 0 2322 105 0 6 chr10 116615013 116615327 -28973961 + AluSx SINE Alu 1 312 0 29 47 0 0 chr10 116615712 116615755 -28973533 + AT_rich Low_complexity Low_complexity 1 43 0 1205 178 35 14 chr10 116616372 116616657 -28972631 - L1MA7 LINE L1 -164 6141 5847 2255 107 0 16 chr10 116617221 116617529 -28971759 + AluSc SINE Alu 1 303 -6 516 321 83 64 chr10 116618458 116619017 -28970271 - L2 LINE L2 -24 3289 2697 726 254 80 42 chr10 116619024 116619286 -28970002 + L1ME1 LINE L1 5909 6334 0 467 315 59 25 chr10 116619287 116619490 -28969798 - L2 LINE L2 -618 2696 2487 184 289 0 0 chr10 116619737 116619782 -28969506 + L2 LINE L2 3261 3305 -8 318 82 102 0 chr10 116620564 116620613 -28968675 - MER58A DNA MER1_type -1 223 170 * 1015 242 14 9 chr10 116620605 116620816 -28968472 - MER58A DNA MER1_type -10 214 3 466 220 50 88 chr10 116621884 116622066 -28967222 - MIR SINE MIR -70 192 18 307 299 61 37 chr10 116622538 116622702 -28966586 - MIR SINE MIR -46 216 49 260 299 77 8 chr10 116622787 116622904 -28966384 - MIR SINE MIR -35 227 103 1651 146 0 90 chr10 116625207 116625528 -28963760 - AluJb SINE Alu -15 297 6 904 229 17 0 chr10 116625626 116625805 -28963483 + L1MB8 LINE L1 5991 6172 -6 788 196 51 0 chr10 116625860 116625998 -28963290 + MER46B DNA MER2_type 2 21 -215 434 230 15 7 chr10 116625998 116626133 -28963155 + L1MA4 LINE L1 6165 6300 0 1393 123 14 0 chr10 116626154 116626374 -28962914 + MER46B DNA MER2_type 14 236 0 475 293 20 13 chr10 116626430 116626580 -28962708 - MIR SINE MIR -111 151 1 262 286 0 29 chr10 116626689 116626759 -28962529 - L2 LINE L2 -7 3306 3239 1690 149 80 0 chr10 116627424 116627713 -28961575 - AluSx SINE Alu 0 312 1 526 320 65 7 chr10 116628639 116628858 -28960430 + MIR SINE MIR 34 262 0 1801 88 34 0 chr10 116630381 116630619 -28958669 + AluSg SINE Alu 26 271 -39 246 81 0 0 chr10 116630772 116630809 -28958479 + (A)n Simple_repeat Simple_repeat 1 37 0 546 308 67 38 chr10 116631195 116631435 -28957853 + MIR SINE MIR 16 262 0 198 0 0 0 chr10 116632056 116632078 -28957210 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 1788 160 0 0 chr10 116632083 116632358 -28956930 - AluSx SINE Alu -37 275 1 390 85 0 0 chr10 116632441 116632500 -28956788 + (TG)n Simple_repeat Simple_repeat 2 60 0 1908 199 21 42 chr10 116632501 116632711 -28956577 - MLT1A2 LTR MaLR -1 373 173 2337 87 3 10 chr10 116632711 116633020 -28956268 - AluY SINE Alu -4 307 1 1908 199 21 42 chr10 116633020 116633190 -28956098 - MLT1A2 LTR MaLR -201 173 1 274 271 35 12 chr10 116633723 116633808 -28955480 - L1MC/D LINE L1 -2027 5781 5695 789 247 11 0 chr10 116635202 116635376 -28953912 - MIR SINE MIR -66 196 21 1962 167 157 10 chr10 116636085 116636487 -28952801 - LOR1b LTR ERV1 0 461 1 353 270 63 19 chr10 116636706 116636834 -28952454 + MIR SINE MIR 35 167 -64 377 258 70 108 chr10 116636924 116637039 -28952249 - MLT1K LTR MaLR -160 428 323 2086 128 3 3 chr10 116637039 116637336 -28951952 - AluSx SINE Alu -15 297 1 377 258 70 108 chr10 116637336 116637433 -28951855 - MLT1K LTR MaLR -265 323 224 207 0 0 0 chr10 116637575 116637598 -28951690 + (CA)n Simple_repeat Simple_repeat 2 24 0 269 289 132 0 chr10 116637751 116637872 -28951416 - MIR SINE MIR -73 189 53 330 294 11 11 chr10 116638578 116638670 -28950618 - MIR SINE MIR -12 250 159 530 313 87 36 chr10 116638672 116639160 -28950128 - MLT1K LTR MaLR -2 586 3 306 305 9 29 chr10 116639228 116639333 -28949955 - MIR SINE MIR -155 107 5 291 421 16 8 chr10 116641008 116641129 -28948159 + MIR3 SINE MIR 9 130 -78 288 377 8 0 chr10 116641536 116641666 -28947622 + L3 LINE CR1 1345 1475 -102 2480 61 3 3 chr10 116642094 116642405 -28946883 - AluY SINE Alu 0 311 1 2514 68 3 0 chr10 116642424 116642734 -28946554 - AluY SINE Alu 0 311 1 430 299 60 16 chr10 116643202 116643386 -28945902 + MIR SINE MIR 12 203 -59 951 296 89 18 chr10 116643719 116644057 -28945231 - MLT2E LTR ERVL -228 400 39 357 198 62 0 chr10 116644507 116644588 -28944700 - HsTC2 DNA Tc2 -7 1891 1806 309 258 0 0 chr10 116644588 116644654 -28944634 - Tigger1 DNA MER2_type 0 2418 2353 * 2210 139 9 94 chr10 116644646 116645084 -28944204 - Tigger1 DNA MER2_type -2017 401 1 306 262 0 0 chr10 116645084 116645168 -28944120 - HsTC2 DNA Tc2 -1809 89 6 195 152 0 0 chr10 116645169 116645202 -28944086 + L2 LINE L2 3280 3312 -1 22 35 0 0 chr10 116645234 116645263 -28944025 + AT_rich Low_complexity Low_complexity 1 29 0 1295 130 109 4 chr10 116645263 116645502 -28943786 - L1MA5A LINE L1 -6 6291 6028 293 315 11 0 chr10 116645724 116645816 -28943472 - L3 LINE CR1 -10 1567 1475 3262 164 13 30 chr10 116646813 116647422 -28941866 - L1MD3 LINE L1 -14 7981 7383 632 236 0 0 chr10 116647463 116647586 -28941702 - MLT1F1 LTR MaLR -442 125 3 376 200 267 0 chr10 116647589 116647694 -28941594 - L1MD3 LINE L1 -719 7276 7144 2210 99 23 0 chr10 116647743 116648046 -28941242 - AluY SINE Alu -1 310 1 195 139 0 0 chr10 116648361 116648397 -28940891 + (CA)n Simple_repeat Simple_repeat 2 37 0 2183 76 0 4 chr10 116648778 116649054 -28940234 + AluY SINE Alu 1 275 -36 222 37 0 0 chr10 116649060 116649087 -28940201 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 376 237 59 40 chr10 116649255 116649407 -28939881 + L1ME4a LINE L1 5960 6114 -7 2192 110 0 17 chr10 116649458 116649757 -28939531 + AluSx SINE Alu 1 294 -18 309 285 7 40 chr10 116649885 116650036 -28939252 + CT-rich Low_complexity Low_complexity 4 149 0 2028 168 5 45 chr10 116650318 116650503 -28938785 + MER46B DNA MER2_type 1 40 -2691 2229 123 0 0 chr10 116650503 116650795 -28938493 + AluSx SINE Alu 1 292 -20 2028 168 5 45 chr10 116650795 116650984 -28938304 + MER46B DNA MER2_type 40 235 -1 228 35 0 0 chr10 116651531 116651560 -28937728 + (TC)n Simple_repeat Simple_repeat 2 30 0 1850 163 3 7 chr10 116651577 116651866 -28937422 - AluSx SINE Alu -24 288 1 402 293 30 48 chr10 116651975 116652142 -28937146 + MIR3 SINE MIR 37 200 -8 204 280 30 30 chr10 116652165 116652265 -28937023 - MIR SINE MIR -58 204 105 * 244 323 15 0 chr10 116652258 116652323 -28936965 + MIR SINE MIR 35 100 -162 381 331 18 35 chr10 116652367 116652536 -28936752 - L3 LINE CR1 -855 722 557 343 313 95 7 chr10 116652625 116652772 -28936516 + L2 LINE L2 3137 3296 -17 28 29 0 0 chr10 116652776 116652811 -28936477 + AT_rich Low_complexity Low_complexity 1 35 0 251 178 79 50 chr10 116652982 116653083 -28936205 + Charlie7 DNA MER1_type 2452 2555 -57 2097 119 7 3 chr10 116653210 116653512 -28935776 - AluY SINE Alu -8 303 1 299 86 0 69 chr10 116653525 116653583 -28935705 - AluY SINE Alu -168 133 80 1207 144 6 0 chr10 116653689 116653863 -28935425 - AluSx SINE Alu -137 175 1 663 204 0 0 chr10 116654080 116654188 -28935100 + AluJo/FLAM SINE Alu 2 109 -203 980 166 12 12 chr10 116654188 116654351 -28934937 - AluJo SINE Alu -143 169 7 230 290 83 65 chr10 116654981 116655150 -28934138 + L1MC/D LINE L1 5745 5916 -1892 1692 127 55 0 chr10 116655372 116655608 -28933680 - AluSx SINE Alu -60 252 4 22 0 0 0 chr10 116655620 116655642 -28933646 + AT_rich Low_complexity Low_complexity 1 22 0 318 115 0 0 chr10 116655989 116656041 -28933247 + (CA)n Simple_repeat Simple_repeat 2 53 0 206 191 24 0 chr10 116656186 116656228 -28933060 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 2014 90 87 0 chr10 116657883 116658160 -28931128 - AluSq SINE Alu -12 301 1 222 273 121 24 chr10 116658253 116658418 -28930870 - MIR SINE MIR 0 262 82 22 0 0 0 chr10 116658906 116658928 -28930360 + AT_rich Low_complexity Low_complexity 1 22 0 239 284 0 49 chr10 116659117 116659198 -28930090 - L2 LINE L2 -2584 730 654 182 173 0 19 chr10 116659372 116659424 -28929864 + (ATG)n Simple_repeat Simple_repeat 3 53 0 1954 141 37 3 chr10 116659912 116660209 -28929079 - AluSc SINE Alu -2 307 1 201 226 10 20 chr10 116661099 116661201 -28928087 + CT-rich Low_complexity Low_complexity 2 102 0 208 342 53 43 chr10 116661485 116661672 -28927616 - L2 LINE L2 -236 3036 2848 2282 71 58 3 chr10 116661726 116662020 -28927268 - AluY SINE Alu -1 310 1 28 71 0 0 chr10 116663291 116663347 -28925941 + AT_rich Low_complexity Low_complexity 1 56 0 262 299 94 26 chr10 116663743 116663860 -28925428 - MIR SINE MIR -80 182 58 224 279 54 54 chr10 116663848 116663959 -28925329 + MIR SINE MIR 142 252 -10 * 1711 92 0 0 chr10 116664792 116665010 -28924278 + AluSc SINE Alu 73 290 -19 553 323 43 83 chr10 116665020 116665532 -28923756 + L2 LINE L2 2751 3238 -75 971 216 12 0 chr10 116665532 116665699 -28923589 + FAM SINE Alu 1 169 -6 553 323 43 83 chr10 116665699 116665767 -28923521 + L2 LINE L2 3238 3307 -6 191 214 393 0 chr10 116665854 116665938 -28923350 - MER5A DNA MER1_type -7 182 66 2481 70 0 16 chr10 116665938 116666250 -28923038 - AluY SINE Alu -4 307 1 2602 53 0 0 chr10 116668295 116668598 -28920690 + AluY SINE Alu 1 303 -8 2088 115 0 7 chr10 116671032 116671344 -28917944 - AluSx SINE Alu 0 310 1 525 273 72 41 chr10 116672377 116672571 -28916717 - MIR SINE MIR -12 250 51 2387 87 0 3 chr10 116672757 116673067 -28916221 + AluSg SINE Alu 1 309 -1 1926 119 24 7 chr10 116673367 116673661 -28915627 + AluSx SINE Alu 1 299 -13 234 263 20 61 chr10 116674135 116674234 -28915054 + Charlie8 DNA MER1_type 26 120 -2297 344 42 0 0 chr10 116674412 116674460 -28914828 + AluY SINE Alu 254 301 0 2059 130 3 0 chr10 116674481 116674782 -28914506 - AluSg SINE Alu -8 302 1 223 250 0 0 chr10 116674807 116674851 -28914437 + polypurine Low_complexity Low_complexity 1 44 0 21 0 0 0 chr10 116676275 116676296 -28912992 + AT_rich Low_complexity Low_complexity 1 21 0 186 271 82 82 chr10 116677521 116677643 -28911645 + L2 LINE L2 3172 3293 -20 2081 100 46 0 chr10 116677895 116678176 -28911112 - AluSc SINE Alu -15 294 1 218 359 61 8 chr10 116678466 116678597 -28910691 + L2 LINE L2 3168 3305 -8 633 276 30 83 chr10 116678660 116678925 -28910363 - MIR SINE MIR -7 255 5 2412 76 0 3 chr10 116681165 116681469 -28907819 + AluY SINE Alu 1 303 -8 2130 104 24 13 chr10 116682308 116682606 -28906682 - AluSq SINE Alu -10 303 3 242 377 66 24 chr10 116683045 116683212 -28906076 - L2 LINE L2 0 3272 3099 349 310 41 14 chr10 116683335 116683480 -28905808 + MIR3 SINE MIR 60 208 0 2093 125 35 0 chr10 116683547 116683835 -28905453 + AluSx SINE Alu 1 298 -14 2274 108 0 3 chr10 116683835 116684132 -28905156 + AluSg1 SINE Alu 1 296 -13 479 204 30 15 chr10 116684906 116685038 -28904250 + THE1C LTR MaLR 242 375 0 9820 119 41 9 chr10 116685080 116686548 -28902740 + THE1C-int LTR MaLR 67 1580 0 825 126 152 13 chr10 116686548 116686699 -28902589 + THE1C LTR MaLR 1 172 -203 31 0 0 0 chr10 116687346 116687377 -28901911 + AT_rich Low_complexity Low_complexity 1 31 0 234 62 0 0 chr10 116688130 116688162 -28901126 + (TG)n Simple_repeat Simple_repeat 1 32 0 884 274 109 68 chr10 116688164 116688667 -28900621 + MLT1H1 LTR MaLR 32 555 0 632 266 86 61 chr10 116689262 116689782 -28899506 - LTR48B LTR ERV1 0 644 1 2452 64 7 0 chr10 116690417 116690713 -28898575 - AluY SINE Alu -13 298 1 212 216 0 20 chr10 116691295 116691346 -28897942 + (TAAA)n Simple_repeat Simple_repeat 3 52 0 1429 175 9 69 chr10 116691374 116691694 -28897594 - AluJo SINE Alu -11 301 1 2135 126 0 7 chr10 116691913 116692222 -28897066 + AluSg SINE Alu 1 307 -3 2332 71 0 0 chr10 116693046 116693356 -28895932 + AluY SINE Alu 1 310 0 197 284 123 0 chr10 116693369 116693450 -28895838 - MIR SINE MIR -98 164 74 422 220 127 17 chr10 116693762 116693880 -28895408 - MER5A DNA MER1_type -4 185 55 2273 87 3 0 chr10 116694119 116694406 -28894882 + AluSg1 SINE Alu 11 298 -11 2109 122 0 0 chr10 116695111 116695399 -28893889 - AluSx SINE Alu -16 296 9 36 0 0 0 chr10 116696102 116696138 -28893150 + AT_rich Low_complexity Low_complexity 1 36 0 181 0 69 0 chr10 116696180 116696209 -28893079 + (CAAAAA)n Simple_repeat Simple_repeat 6 36 0 2181 77 0 0 chr10 116696553 116696853 -28892435 + AluY SINE Alu 10 309 0 2188 103 17 0 chr10 116697028 116697329 -28891959 + AluSp SINE Alu 1 306 -7 293 0 27 0 chr10 116698131 116698168 -28891120 + (TTCC)n Simple_repeat Simple_repeat 2 39 0 2331 88 0 0 chr10 116698535 116698840 -28890448 + AluY SINE Alu 5 309 -2 1949 128 0 7 chr10 116698914 116699259 -28890029 - AluSc SINE Alu 0 343 1 2519 57 0 7 chr10 116699269 116699570 -28889718 - AluY SINE Alu -12 299 1 473 0 18 0 chr10 116700956 116701013 -28888275 + (TTTTA)n Simple_repeat Simple_repeat 2 59 0 311 238 16 0 chr10 116701020 116701083 -28888205 - AluJ/FRAM SINE Alu -20 282 219 2105 111 14 14 chr10 116702421 116702553 -28886735 + AluSx SINE Alu 1 132 -180 2298 103 0 0 chr10 116702553 116702853 -28886435 + AluSq SINE Alu 1 300 -13 2105 111 14 14 chr10 116702853 116703009 -28886279 + AluSx SINE Alu 131 289 -23 835 250 26 53 chr10 116703373 116703522 -28885766 + MIR SINE MIR 4 145 -117 2510 49 0 7 chr10 116703522 116703827 -28885461 + AluY SINE Alu 1 303 -8 835 250 26 53 chr10 116703827 116703941 -28885347 + MIR SINE MIR 145 260 -2 241 293 27 0 chr10 116704050 116704125 -28885163 + CT-rich Low_complexity Low_complexity 3 79 0 213 283 145 36 chr10 116704242 116704380 -28884908 - L2 LINE L2 -1 3312 3160 2245 89 0 61 chr10 116704511 116704838 -28884450 + AluY SINE Alu 1 307 -4 29 28 0 0 chr10 116705112 116705148 -28884140 + AT_rich Low_complexity Low_complexity 1 36 0 303 143 0 0 chr10 116705453 116705495 -28883793 - THE1B LTR MaLR 0 355 314 6605 50 0 0 chr10 116705495 116706528 -28882760 - L1PA5 LINE L1 -537 5617 4585 4673 53 2 0 chr10 116706528 116707060 -28882228 + L1PA5 LINE L1 5608 6151 -3 1757 142 82 20 chr10 116707060 116707363 -28881925 - THE1B LTR MaLR -42 322 1 2209 110 3 3 chr10 116708215 116708524 -28880764 - AluSc SINE Alu 0 309 1 290 324 29 22 chr10 116709372 116709511 -28879777 - MIR3 SINE MIR -7 201 62 260 300 147 35 chr10 116710266 116710436 -28878852 - MIR SINE MIR -62 200 12 2577 58 0 3 chr10 116710548 116710860 -28878428 + AluY SINE Alu 1 311 0 189 380 35 21 chr10 116711729 116711871 -28877417 + L2 LINE L2 2600 2743 -571 206 333 87 27 chr10 116711979 116712129 -28877159 + L2 LINE L2 2871 3029 -243 38 39 0 0 chr10 116712497 116712549 -28876739 + AT_rich Low_complexity Low_complexity 1 52 0 421 251 128 107 chr10 116713408 116713633 -28875655 + L1ME4a LINE L1 5350 5569 -552 2025 130 3 13 chr10 116713633 116713934 -28875354 - AluSc SINE Alu -11 298 1 421 251 128 107 chr10 116713934 116714448 -28874840 + L1ME4a LINE L1 5569 6105 -16 2691 161 31 15 chr10 116714638 116715092 -28874196 + LOR1b LTR ERV1 1 461 0 235 214 0 0 chr10 116715124 116715166 -28874122 + LOR1a LTR ERV1 456 497 0 1678 157 113 23 chr10 116715217 116715561 -28873727 + THE1C LTR MaLR 1 375 0 1242 104 135 14 chr10 116715561 116715783 -28873505 + THE1C-int LTR MaLR 1 249 -1331 2632 168 32 52 chr10 116716241 116716681 -28872607 + MLT2B2 LTR ERVL 3 433 -82 243 0 0 0 chr10 116716681 116716708 -28872580 + (CAAT)n Simple_repeat Simple_repeat 2 28 0 2632 168 32 52 chr10 116716708 116716790 -28872498 + MLT2B2 LTR ERVL 433 515 0 2257 102 0 3 chr10 116717904 116718199 -28871089 + AluSg SINE Alu 1 294 -16 208 374 33 0 chr10 116718416 116718507 -28870781 + L2 LINE L2 2581 2674 -640 288 0 0 0 chr10 116718663 116718695 -28870593 + (TG)n Simple_repeat Simple_repeat 2 33 0 656 257 15 48 chr10 116721484 116721690 -28867598 + L2 LINE L2 3115 3313 0 668 134 0 10 chr10 116723783 116723880 -28865408 - AluSx SINE Alu -10 299 204 1073 93 14 0 chr10 116723883 116724023 -28865265 - AluSx SINE Alu -170 142 1 186 103 0 0 chr10 116724779 116724808 -28864480 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 754 224 70 0 chr10 116726513 116726656 -28862632 - FRAM SINE Alu -24 152 1 217 288 68 90 chr10 116727256 116727399 -28861889 + MIR SINE MIR 19 159 -75 410 294 106 12 chr10 116727412 116727582 -28861706 - MIR SINE MIR -12 250 65 859 96 9 0 chr10 116728349 116728464 -28860824 + AluY SINE Alu 1 116 -195 875 205 17 67 chr10 116728587 116728826 -28860462 - AluJo SINE Alu -85 227 1 201 238 0 0 chr10 116729095 116729137 -28860151 + (TG)n Simple_repeat Simple_repeat 1 42 0 313 250 20 20 chr10 116729471 116729571 -28859717 + LTR67 LTR ERVL 454 553 -4 204 269 0 19 chr10 116731103 116731155 -28858133 + L2 LINE L2 2599 2649 -665 225 250 19 0 chr10 116731418 116731470 -28857818 + (TA)n Simple_repeat Simple_repeat 2 54 0 928 290 76 23 chr10 116731871 116732267 -28857021 + LTR16C LTR ERVL 75 491 0 345 236 0 0 chr10 116732305 116732377 -28856911 - MIR SINE MIR -87 175 104 369 300 65 75 chr10 116732839 116732925 -28856363 + L1ME4a LINE L1 5328 5413 -708 1822 163 3 10 chr10 116732925 116733231 -28856057 - AluJb SINE Alu -8 304 1 369 300 65 75 chr10 116733231 116733258 -28856030 + L1ME4a LINE L1 5413 5439 -682 2274 95 0 3 chr10 116733258 116733553 -28855735 + AluY SINE Alu 1 294 -17 369 300 65 75 chr10 116733553 116733745 -28855543 + L1ME4a LINE L1 5439 5631 -490 398 301 79 63 chr10 116733746 116734062 -28855226 + L1ME4a LINE L1 5599 5919 -202 2070 147 0 0 chr10 116734293 116734593 -28854695 + AluY SINE Alu 1 300 -11 181 281 88 0 chr10 116735814 116735871 -28853417 - L2 LINE L2 -70 3243 3182 471 308 119 35 chr10 116736382 116736927 -28852361 + L1ME4a LINE L1 2856 3446 -2700 2678 69 3 95 chr10 116737541 116737612 -28851676 - THE1A LTR MaLR 0 355 279 186 43 0 0 chr10 116737612 116737635 -28851653 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1950 102 4 0 chr10 116737645 116737909 -28851379 - AluSq SINE Alu -48 265 1 2678 69 3 95 chr10 116737909 116738217 -28851071 - THE1A LTR MaLR -85 270 1 400 308 174 27 chr10 116738484 116739071 -28850217 + L1ME4a LINE L1 5445 6117 -4 1925 116 0 0 chr10 116739140 116739391 -28849897 + AluSx SINE Alu 1 251 -61 189 0 0 0 chr10 116740880 116740901 -28848387 + (GA)n Simple_repeat Simple_repeat 2 22 0 22 0 0 0 chr10 116741186 116741208 -28848080 + AT_rich Low_complexity Low_complexity 1 22 0 352 348 64 16 chr10 116741424 116741674 -28847614 - L2 LINE L2 -762 2552 2291 373 252 52 37 chr10 116742068 116742203 -28847085 - MIR3 SINE MIR -10 198 62 195 42 0 0 chr10 116742776 116742800 -28846488 + (GTTTG)n Simple_repeat Simple_repeat 5 28 0 2237 103 3 10 chr10 116743783 116744095 -28845193 + AluSg SINE Alu 1 310 0 231 338 65 29 chr10 116744233 116744372 -28844916 - MER5A DNA MER1_type -2 187 44 183 80 0 0 chr10 116744436 116744461 -28844827 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 1986 121 3 3 chr10 116744614 116744931 -28844357 - AluY SINE Alu 0 317 1 596 205 0 53 chr10 116744931 116745082 -28844206 - MER5B DNA MER1_type -35 143 1 226 308 10 48 chr10 116745682 116745786 -28843502 - MIR SINE MIR -72 136 37 183 292 115 10 chr10 116746283 116746379 -28842909 - MIR SINE MIR -10 252 147 288 0 0 0 chr10 116746446 116746478 -28842810 + (CA)n Simple_repeat Simple_repeat 1 32 0 232 302 12 0 chr10 116747109 116747195 -28842093 + L2 LINE L2 2818 2904 -410 352 269 103 40 chr10 116747742 116747917 -28841371 + L2 LINE L2 3128 3313 0 230 167 48 0 chr10 116748039 116748123 -28841165 + (TA)n Simple_repeat Simple_repeat 1 88 0 252 86 0 0 chr10 116748172 116748207 -28841081 + (CA)n Simple_repeat Simple_repeat 2 36 0 46 0 0 0 chr10 116748232 116748278 -28841010 + AT_rich Low_complexity Low_complexity 1 46 0 2320 92 24 0 chr10 116748346 116748639 -28840649 - AluSx SINE Alu -12 300 1 465 298 77 42 chr10 116748691 116748976 -28840312 + L2 LINE L2 3014 3308 -5 729 224 44 44 chr10 116749106 116749311 -28839977 - MER20 DNA MER1_type -14 205 1 2323 82 0 10 chr10 116749754 116750059 -28839229 - AluY SINE Alu -9 302 1 297 306 12 0 chr10 116750155 116750240 -28839048 + GA-rich Low_complexity Low_complexity 3 88 0 1704 178 10 3 chr10 116750440 116750733 -28838555 - AluJb SINE Alu -17 295 1 216 243 114 0 chr10 116750829 116750899 -28838389 - MIR SINE MIR -93 115 38 434 288 45 30 chr10 116751372 116751504 -28837784 - MER94 DNA DNA 0 134 1 4789 166 61 57 chr10 116754113 116754483 -28834805 - L1MC1 LINE L1 0 6333 5966 2343 86 0 7 chr10 116754483 116754785 -28834503 - AluSc SINE Alu -9 300 1 4789 166 61 57 chr10 116754785 116755559 -28833729 - L1MC1 LINE L1 -367 5966 5176 2299 98 14 0 chr10 116755572 116755867 -28833421 + AluSp SINE Alu 1 299 -14 23 33 0 0 chr10 116756014 116756044 -28833244 + AT_rich Low_complexity Low_complexity 1 30 0 453 19 0 0 chr10 116756058 116756112 -28833176 + (TCTA)n Simple_repeat Simple_repeat 1 54 0 313 214 55 76 chr10 116757758 116757903 -28831385 + L1ME LINE L1 5695 5836 -285 490 324 5 22 chr10 116757924 116758109 -28831179 + MIR SINE MIR 33 214 -48 286 225 12 12 chr10 116758148 116758228 -28831060 - MER116 DNA Mariner 0 80 1 351 0 0 0 chr10 116758425 116758464 -28830824 + (CA)n Simple_repeat Simple_repeat 2 40 0 297 0 0 0 chr10 116758463 116758496 -28830792 + (GA)n Simple_repeat Simple_repeat 2 34 0 * 5181 107 154 117 chr10 116758690 116760262 -28829026 - pTR5 LTR ERV1 0 2438 136 35 0 0 0 chr10 116760529 116760564 -28828724 + AT_rich Low_complexity Low_complexity 1 35 0 189 0 0 0 chr10 116761470 116761491 -28827797 + (CA)n Simple_repeat Simple_repeat 2 22 0 1059 121 24 6 chr10 116761491 116761657 -28827631 + Tigger1 DNA MER2_type 2249 2417 -1 3247 154 28 49 chr10 116761657 116762216 -28827072 - L1MC1 LINE L1 -409 6204 5635 2116 139 3 0 chr10 116762216 116762526 -28826762 - AluSx SINE Alu -1 311 1 3247 154 28 49 chr10 116762526 116762605 -28826683 - L1MC1 LINE L1 -978 5635 5578 2096 127 13 0 chr10 116762605 116762905 -28826383 - AluSq SINE Alu -9 304 1 3247 154 28 49 chr10 116762905 116762938 -28826350 - L1MC1 LINE L1 -1035 5578 5546 4816 180 81 14 chr10 116762949 116763417 -28825871 - L1MA9 LINE L1 0 6312 5877 2335 81 0 19 chr10 116763417 116763725 -28825563 - AluY SINE Alu -7 304 3 4816 180 81 14 chr10 116763725 116764553 -28824735 - L1MA9 LINE L1 -435 5877 4903 43766 33 21 1 chr10 116764573 116770603 -28818685 - L1PA2 LINE L1 0 6155 3 327 253 104 135 chr10 116770657 116771072 -28818216 + L2 LINE L2 2216 2617 -697 9196 217 42 36 chr10 116771075 116772408 -28816880 - L1MC1 LINE L1 -869 5557 4234 2354 107 0 3 chr10 116772408 116772717 -28816571 + AluSc SINE Alu 1 308 -1 9196 217 42 36 chr10 116772717 116776089 -28813199 - L1MC1 LINE L1 -2192 4234 715 2192 110 0 10 chr10 116776089 116776390 -28812898 - AluSx SINE Alu -14 298 1 9196 217 42 36 chr10 116776390 116777090 -28812198 - L1MC1 LINE L1 -5711 715 21 297 283 44 18 chr10 116777144 116777257 -28812031 + L2 LINE L2 3154 3269 -3 2185 93 40 3 chr10 116778398 116778698 -28810590 + AluY SINE Alu 1 311 0 2050 114 17 0 chr10 116779460 116779750 -28809538 - AluSx SINE Alu -17 295 1 856 292 21 0 chr10 116780486 116780726 -28808562 - MIR SINE MIR 0 262 18 2138 121 3 10 chr10 116781176 116781481 -28807807 + AluSx SINE Alu 1 303 -9 2219 94 3 0 chr10 116781670 116781956 -28807332 + AluSc SINE Alu 1 287 -22 228 268 84 0 chr10 116782125 116782196 -28807092 + MIR3 SINE MIR 126 202 -6 1060 76 0 0 chr10 116782724 116782856 -28806432 + AluY SINE Alu 1 132 -179 275 361 120 0 chr10 116782871 116782979 -28806309 - MIR3 SINE MIR -54 154 34 22 0 0 0 chr10 116783267 116783289 -28805999 + AT_rich Low_complexity Low_complexity 1 22 0 2047 151 0 3 chr10 116783304 116783603 -28805685 + AluSx SINE Alu 1 298 -14 8939 169 28 38 chr10 116784174 116785504 -28803784 + L1PA12 LINE L1 11 1354 -6227 2069 112 3 3 chr10 116785504 116785837 -28803451 + AluSx SINE Alu 1 333 0 8939 169 28 38 chr10 116785837 116785850 -28803438 + L1PA12 LINE L1 1354 1366 -6215 2074 92 4 0 chr10 116785850 116786110 -28803178 + AluSx SINE Alu 38 298 -14 8939 169 28 38 chr10 116786110 116787072 -28802216 + L1PA12 LINE L1 1366 2576 -5005 16549 189 19 17 chr10 116787078 116787346 -28801942 + L1PA12 LINE L1 3007 3273 -4333 2418 71 3 0 chr10 116787346 116787641 -28801647 - AluY SINE Alu -15 296 1 16549 189 19 17 chr10 116787641 116791967 -28797321 + L1PA12 LINE L1 3273 7606 0 1028 328 59 34 chr10 116791997 116792593 -28796695 - L2 LINE L2 0 3313 2686 191 287 148 30 chr10 116792621 116792722 -28796566 + MIR SINE MIR 134 246 -16 2145 92 0 4 chr10 116792950 116793222 -28796066 + AluSg SINE Alu 1 271 -39 1069 78 0 59 chr10 116793238 116793391 -28795897 + AluSp/q SINE Alu 160 303 -10 299 240 264 0 chr10 116793955 116794080 -28795208 + MIR SINE MIR 26 183 -79 196 397 25 8 chr10 116794239 116794360 -28794928 + L3b LINE CR1 1446 1568 -15 374 321 0 18 chr10 116794484 116794596 -28794692 - L2 LINE L2 -36 3277 3168 319 339 154 18 chr10 116794747 116794968 -28794320 - L2 LINE L2 -353 2961 2711 5384 119 12 0 chr10 116795024 116795862 -28793426 - L1PB3 LINE L1 -3 6151 5304 244 284 91 34 chr10 116795862 116795950 -28793338 - L2 LINE L2 -599 2715 2623 36 53 0 0 chr10 116796057 116796114 -28793174 + AT_rich Low_complexity Low_complexity 1 57 0 250 284 75 0 chr10 116796999 116797066 -28792222 + L2 LINE L2 3157 3228 -44 359 195 20 6 chr10 116797361 116797607 -28791681 + AluJo SINE Alu 5 302 0 204 324 14 14 chr10 116797975 116798049 -28791239 - MIR SINE MIR -188 74 1 1566 159 128 12 chr10 116798378 116798676 -28790612 + MLT1A1 LTR MaLR 1 342 -23 261 0 0 0 chr10 116798676 116798705 -28790583 + (TA)n Simple_repeat Simple_repeat 2 30 0 1566 159 128 12 chr10 116798705 116798733 -28790555 + MLT1A1 LTR MaLR 342 365 0 500 218 140 95 chr10 116798811 116798923 -28790365 + MER20B DNA MER1_type 267 373 -410 2269 84 7 10 chr10 116798923 116799219 -28790069 + AluY SINE Alu 3 297 -14 500 218 140 95 chr10 116799219 116799506 -28789782 + MER20B DNA MER1_type 373 684 -99 1882 218 117 38 chr10 116799510 116800084 -28789204 + MLT1E2 LTR MaLR 5 623 -3 295 323 20 20 chr10 116800554 116800653 -28788635 - MER5A DNA MER1_type -43 146 48 276 333 75 17 chr10 116800557 116800677 -28788611 + MER5A DNA MER1_type 57 183 -6 * 2335 68 44 7 chr10 116800862 116801157 -28788131 + AluY SINE Alu 1 306 -5 273 321 73 29 chr10 116801520 116801657 -28787631 - L3b LINE CR1 -84 1499 1357 256 279 25 38 chr10 116801894 116801973 -28787315 - L2 LINE L2 -4 3268 3191 1356 109 100 5 chr10 116802227 116802437 -28786851 + MER30 DNA MER1_type 1 230 0 739 219 79 6 chr10 116802451 116802629 -28786659 - MER58A DNA MER1_type -6 218 28 261 98 0 0 chr10 116802704 116802745 -28786543 + (CA)n Simple_repeat Simple_repeat 2 42 0 2314 71 17 14 chr10 116803467 116803762 -28785526 - AluY SINE Alu -15 296 1 207 204 0 23 chr10 116804147 116804191 -28785097 + CT-rich Low_complexity Low_complexity 5 47 0 1851 148 31 86 chr10 116805726 116806029 -28783259 + THE1B LTR MaLR 1 281 -83 2151 116 0 0 chr10 116806029 116806337 -28782951 + AluSq SINE Alu 1 308 0 1851 148 31 86 chr10 116806337 116806417 -28782871 + THE1B LTR MaLR 281 364 0 210 289 58 0 chr10 116806929 116806981 -28782307 - L2 LINE L2 -11 3302 3248 848 142 0 0 chr10 116807516 116807643 -28781645 + AluSg/x SINE Alu 171 297 -13 243 341 22 51 chr10 116807955 116808093 -28781195 + MIR3 SINE MIR 7 140 -68 212 293 17 0 chr10 116808521 116808579 -28780709 + L2 LINE L2 3250 3308 -5 313 296 0 0 chr10 116809388 116809469 -28779819 + MER5A DNA MER1_type 9 89 -100 1009 83 0 8 chr10 116809531 116809664 -28779624 + AluY SINE Alu 1 132 -179 2253 71 51 3 chr10 116809667 116809961 -28779327 + AluY SINE Alu 1 308 -3 404 320 44 39 chr10 116810044 116810225 -28779063 + MER5A DNA MER1_type 7 188 -1 911 222 0 0 chr10 116811551 116811713 -28777575 - FRAM SINE Alu -4 162 1 201 175 0 0 chr10 116812616 116812656 -28776632 + (TTCA)n Simple_repeat Simple_repeat 2 41 0 2226 88 0 29 chr10 116812945 116813253 -28776035 - AluSq SINE Alu -14 299 1 409 333 54 0 chr10 116813449 116813578 -28775710 + L2 LINE L2 3137 3272 0 501 127 0 0 chr10 116814280 116814359 -28774929 + (TG)n Simple_repeat Simple_repeat 2 80 0 258 345 26 9 chr10 116814888 116815001 -28774287 + MIR SINE MIR 79 193 -69 2080 136 0 0 chr10 116815379 116815666 -28773622 + AluSx SINE Alu 1 287 -25 2283 187 49 96 chr10 116815682 116816197 -28773091 + L1MB3 LINE L1 5486 5959 -224 2176 141 0 3 chr10 116816197 116816509 -28772779 + AluSx SINE Alu 1 311 -1 2283 187 49 96 chr10 116816509 116816711 -28772577 + L1MB3 LINE L1 5959 6169 -14 2509 57 0 3 chr10 116816941 116817242 -28772046 - AluY SINE Alu -11 300 1 189 373 146 9 chr10 116818986 116819096 -28770192 - MIR SINE MIR -64 144 20 240 337 58 12 chr10 116819124 116819210 -28770078 + L2 LINE L2 3190 3279 -34 646 242 44 0 chr10 116819476 116819658 -28769630 - MER3 DNA MER1_type -13 196 7 338 279 65 32 chr10 116819686 116819840 -28769448 - MIR SINE MIR -10 252 94 2626 36 0 3 chr10 116820608 116820910 -28768378 + AluY SINE Alu 1 301 -10 318 293 15 4 chr10 116821597 116821775 -28767513 + MER41B LTR ERV1 114 427 -208 510 316 189 7 chr10 116822188 116822473 -28766815 + L2 LINE L2 2950 3286 -27 1935 190 17 12 chr10 116822675 116823085 -28766203 - L1MC1 LINE L1 0 6333 5922 12562 138 34 10 chr10 116823086 116825233 -28764055 + Tigger1 DNA MER2_type 2 2200 -218 212 0 36 0 chr10 116825250 116825278 -28764010 + (TA)n Simple_repeat Simple_repeat 2 30 0 1330 95 11 26 chr10 116825278 116825458 -28763830 - AluSc SINE Alu -21 288 110 209 320 112 56 chr10 116827960 116828138 -28761150 - MIR SINE MIR -66 196 9 219 69 0 0 chr10 116828144 116828173 -28761115 + (T)n Simple_repeat Simple_repeat 1 29 0 1936 167 0 0 chr10 116828194 116828493 -28760795 + AluSx SINE Alu 1 299 -13 2174 118 0 29 chr10 116828493 116828808 -28760480 + AluSg SINE Alu 1 306 -4 189 0 0 0 chr10 116828874 116828895 -28760393 + (TTCA)n Simple_repeat Simple_repeat 1 21 0 2281 121 0 0 chr10 116829762 116830069 -28759219 - AluSx SINE Alu -5 307 1 211 200 0 0 chr10 116830574 116830619 -28758669 + (TG)n Simple_repeat Simple_repeat 2 46 0 2452 65 0 0 chr10 116831351 116831673 -28757615 - AluY SINE Alu 0 311 1 2227 108 3 0 chr10 116833304 116833600 -28755688 + AluSp SINE Alu 1 297 -16 237 269 67 58 chr10 116833660 116833764 -28755524 - MIR SINE MIR -79 183 79 1951 133 3 17 chr10 116833876 116834178 -28755110 + L1PB3 LINE L1 5857 6154 0 192 129 16 0 chr10 116834219 116834254 -28755034 - MIR SINE MIR -115 147 113 479 263 91 43 chr10 116834711 116834897 -28754391 - MIR3 SINE MIR -1 207 13 2518 110 8 25 chr10 116836116 116836276 -28753012 + THE1B LTR MaLR 1 162 -202 1935 141 3 26 chr10 116836276 116836580 -28752708 - AluSx SINE Alu -15 297 1 2518 110 8 25 chr10 116836580 116836784 -28752504 + THE1B LTR MaLR 162 359 -5 2353 112 0 0 chr10 116836784 116837096 -28752192 + AluSx SINE Alu 1 312 0 256 309 0 15 chr10 116839458 116839526 -28749762 - L2 LINE L2 -21 3251 3185 2173 135 0 0 chr10 116839703 116840007 -28749281 + AluSq SINE Alu 1 304 -9 851 257 68 9 chr10 116840067 116840289 -28748999 + MIR SINE MIR 16 250 -12 385 261 89 32 chr10 116840441 116840598 -28748690 - MIR SINE MIR -82 180 15 308 322 106 75 chr10 116841846 116842627 -28746661 + L2 LINE L2 1538 2293 -1021 2267 80 0 10 chr10 116842627 116842915 -28746373 + AluY SINE Alu 1 285 -26 180 0 0 0 chr10 116842915 116842935 -28746353 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 308 322 106 75 chr10 116842935 116843130 -28746158 + L2 LINE L2 2292 2546 -768 227 247 35 24 chr10 116843502 116843587 -28745701 + L2 LINE L2 2976 3061 -211 477 284 101 66 chr10 116843753 116843976 -28745312 - L2 LINE L2 0 3313 3074 2310 118 0 6 chr10 116843976 116844289 -28744999 - AluSx SINE Alu -1 311 1 477 284 101 66 chr10 116844289 116844382 -28744906 - L2 LINE L2 -239 3074 2986 2664 127 3 3 chr10 116845421 116845783 -28743505 + THE1B LTR MaLR 1 362 -2 222 303 56 78 chr10 116845869 116846011 -28743277 + L2 LINE L2 3134 3272 0 401 311 52 60 chr10 116846135 116846517 -28742771 + L1MC/D LINE L1 5373 5751 -2057 394 271 104 78 chr10 116846570 116846663 -28742625 + MIR SINE MIR 61 150 -112 2116 106 33 13 chr10 116846663 116846964 -28742324 + AluSq SINE Alu 1 307 -6 394 271 104 78 chr10 116846964 116847062 -28742226 + MIR SINE MIR 150 257 -5 1351 201 79 11 chr10 116847492 116847770 -28741518 + AluJo SINE Alu 1 297 -15 2287 94 0 7 chr10 116847779 116848077 -28741211 + AluY SINE Alu 1 296 -15 215 217 22 0 chr10 116849674 116849720 -28739568 + (TG)n Simple_repeat Simple_repeat 2 48 0 * 262 244 47 0 chr10 116849687 116849773 -28739515 + (TA)n Simple_repeat Simple_repeat 1 90 0 199 194 0 0 chr10 116849885 116849916 -28739372 + MIR SINE MIR 67 97 -165 197 322 0 0 chr10 116849945 116850004 -28739284 + MIR SINE MIR 194 252 -10 203 200 0 0 chr10 116850009 116850044 -28739244 + (TTA)n Simple_repeat Simple_repeat 1 35 0 2429 70 3 7 chr10 116850331 116850632 -28738656 + AluY SINE Alu 1 300 -11 25 51 0 0 chr10 116850747 116850786 -28738502 + AT_rich Low_complexity Low_complexity 1 39 0 229 302 0 16 chr10 116850825 116850888 -28738400 - L2 LINE L2 -9 3263 3202 2440 171 59 9 chr10 116850965 116851404 -28737884 + LOR1b LTR ERV1 1 461 0 408 40 0 0 chr10 116851644 116851694 -28737594 + (TTATA)n Simple_repeat Simple_repeat 5 54 0 1458 216 3 27 chr10 116851795 116852087 -28737201 + AluJo SINE Alu 1 285 -27 34 0 0 0 chr10 116852102 116852136 -28737152 + AT_rich Low_complexity Low_complexity 1 34 0 351 65 0 0 chr10 116852244 116852290 -28736998 + (TG)n Simple_repeat Simple_repeat 2 47 0 1210 260 65 9 chr10 116852299 116852622 -28736666 + MER2 DNA MER2_type 3 343 -1 1716 202 42 0 chr10 116852638 116852969 -28736319 - MER7A DNA MER2_type -1 345 3 626 212 0 8 chr10 116853596 116853714 -28735574 - LTR28 LTR ERV1 -903 117 1 472 199 28 43 chr10 116853863 116854004 -28735284 + LTR27 LTR ERV1 289 427 -209 * 642 227 20 45 chr10 116853996 116854194 -28735094 + LTR28 LTR ERV1 528 720 -300 * 1554 224 153 57 chr10 116854166 116854661 -28734627 + MER52A LTR ERV1 1209 1751 -4 954 102 0 29 chr10 116854806 116854943 -28734345 + AluSp SINE Alu 1 133 -180 2190 100 3 7 chr10 116854947 116855246 -28734042 + AluSp SINE Alu 1 298 -15 2326 86 9 16 chr10 116856258 116856573 -28732715 - AluSq SINE Alu 0 313 1 329 286 92 0 chr10 116856763 116856882 -28732406 - MER69A DNA AcHobo -47 130 1 213 366 104 30 chr10 116856935 116857069 -28732219 - L2 LINE L2 0 3272 3129 642 202 16 8 chr10 116858782 116858911 -28730377 - FLAM_A SINE Alu -3 130 1 2436 88 7 0 chr10 116859495 116859802 -28729486 - AluSc SINE Alu 0 309 1 21 36 0 0 chr10 116860408 116860436 -28728852 + AT_rich Low_complexity Low_complexity 1 28 0 1432 194 94 32 chr10 116860717 116861129 -28728159 + MER66A LTR ERV1 130 478 0 2231 101 19 0 chr10 116861219 116861526 -28727762 + AluSp SINE Alu 1 313 0 2632 43 7 0 chr10 116862212 116862516 -28726772 - AluY SINE Alu -5 306 1 1687 176 17 14 chr10 116863414 116863572 -28725716 - AluJo SINE Alu -21 291 135 243 0 0 0 chr10 116863572 116863599 -28725689 + (TTTTA)n Simple_repeat Simple_repeat 1 27 0 2071 126 0 0 chr10 116863601 116863887 -28725401 - AluY SINE Alu -25 286 1 1687 176 17 14 chr10 116863887 116864015 -28725273 - AluJo SINE Alu -177 135 1 749 281 80 60 chr10 116864055 116864453 -28724835 - MLT1L LTR MaLR -9 606 201 232 233 82 27 chr10 116864685 116864758 -28724530 - MIR SINE MIR -112 150 74 222 246 18 18 chr10 116864890 116864947 -28724341 - L2 LINE L2 -5 3267 3211 207 0 0 0 chr10 116865997 116866020 -28723268 + (TAAAAA)n Simple_repeat Simple_repeat 2 24 0 2423 53 7 20 chr10 116867025 116867327 -28721961 + AluY SINE Alu 2 299 -12 208 206 0 151 chr10 116868377 116868450 -28720838 - MIR3 SINE MIR -15 193 132 390 182 39 0 chr10 116868812 116868889 -28720399 - MER69 DNA AcHobo -1143 83 4 197 366 28 0 chr10 116868957 116869028 -28720260 + MIR SINE MIR 31 103 -105 738 45 0 0 chr10 116869034 116869123 -28720165 + 5S rRNA rRNA 2 90 -31 237 258 146 34 chr10 116869123 116869212 -28720076 + MIR3 SINE MIR 98 196 -12 2197 115 0 10 chr10 116869349 116869654 -28719634 - AluSq SINE Alu -11 302 1 2124 118 0 35 chr10 116869747 116870062 -28719226 - AluSq SINE Alu -9 304 1 2269 95 3 0 chr10 116871128 116871413 -28717875 + AluSx SINE Alu 17 302 -10 329 241 84 12 chr10 116871563 116871646 -28717642 - MIR SINE MIR -150 112 24 184 266 21 85 chr10 116873144 116873238 -28716050 - L2 LINE L2 -18 3295 3208 180 297 45 45 chr10 116874509 116874620 -28714668 - L2 LINE L2 -12 3301 3191 229 342 76 27 chr10 116874624 116874849 -28714439 + L2 LINE L2 2710 2945 -369 6076 73 22 1 chr10 116875351 116876208 -28713080 - L1PA8 LINE L1 -105 6067 5195 23 0 0 0 chr10 116876308 116876331 -28712957 + AT_rich Low_complexity Low_complexity 1 23 0 2162 110 3 3 chr10 116876673 116876964 -28712324 - AluSq SINE Alu -22 291 1 2415 81 0 0 chr10 116877237 116877532 -28711756 + AluSg SINE Alu 1 295 -15 1050 216 10 0 chr10 116877532 116877726 -28711562 - MER58A DNA MER1_type -28 196 1 214 313 42 0 chr10 116877731 116877827 -28711461 - L2 LINE L2 -655 2659 2560 192 273 102 34 chr10 116878062 116878150 -28711138 - MIR3 SINE MIR -1 207 114 442 275 101 42 chr10 116878257 116878286 -28711002 + MER102a DNA MER1_type 122 148 -1269 197 33 33 0 chr10 116878286 116878316 -28710972 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 442 275 101 42 chr10 116878316 116878475 -28710813 + MER102a DNA MER1_type 148 321 -9 447 283 181 10 chr10 116878492 116878697 -28710591 + MIR SINE MIR 22 261 -1 238 298 75 21 chr10 116878687 116878781 -28710507 - MIR SINE MIR -101 161 63 * 252 282 146 10 chr10 116881622 116881725 -28707563 + L2 LINE L2 3154 3270 -2 705 171 0 0 chr10 116881828 116882003 -28707285 + (TA)n Simple_repeat Simple_repeat 2 176 0 2428 84 0 0 chr10 116883114 116883412 -28705876 - AluY SINE Alu -13 298 1 1872 115 4 4 chr10 116883648 116883909 -28705379 + AluSq SINE Alu 24 318 0 213 59 29 0 chr10 116883909 116883943 -28705345 + (TAAA)n Simple_repeat Simple_repeat 2 180 0 2193 102 7 3 chr10 116884260 116884553 -28704735 - AluSc SINE Alu -13 296 3 254 268 176 28 chr10 116884553 116884695 -28704593 - MIR SINE MIR -69 193 31 203 215 21 21 chr10 116884915 116885008 -28704280 + (CATATA)n Simple_repeat Simple_repeat 6 98 0 282 252 32 65 chr10 116885030 116885153 -28704135 + L1M4 LINE L1 1591 1709 -4833 384 40 0 0 chr10 116885232 116885282 -28704006 + (TG)n Simple_repeat Simple_repeat 2 51 0 536 256 84 32 chr10 116885285 116885806 -28703482 - L1ME LINE L1 -5019 1051 568 359 312 29 12 chr10 116886301 116886471 -28702817 - L1ME LINE L1 -5855 215 43 27 29 0 0 chr10 116886555 116886589 -28702699 + AT_rich Low_complexity Low_complexity 1 34 0 1977 148 0 35 chr10 116887701 116888018 -28701270 + AluSg SINE Alu 3 308 -2 2458 87 0 0 chr10 116888395 116888706 -28700582 - AluY SINE Alu 0 311 1 2250 106 7 0 chr10 116888997 116889290 -28699998 - AluSx SINE Alu -17 295 1 247 289 11 33 chr10 116890444 116890534 -28698754 + GA-rich Low_complexity Low_complexity 6 93 0 1517 186 36 49 chr10 116891210 116891516 -28697772 - AluJo SINE Alu -10 302 1 2438 88 0 0 chr10 116891543 116891850 -28697438 - AluSc SINE Alu -2 307 1 281 252 72 54 chr10 116892132 116892243 -28697045 - MIR SINE MIR -63 145 33 1783 153 47 13 chr10 116892512 116892813 -28696475 + AluJb SINE Alu 1 311 -1 2484 50 0 7 chr10 116893751 116894049 -28695239 + AluY SINE Alu 1 296 -15 1130 179 93 76 chr10 116894492 116894667 -28694621 - LTR37A LTR ERV1 0 426 255 1961 102 40 43 chr10 116894667 116894970 -28694318 + AluSg1 SINE Alu 1 302 -7 1130 179 93 76 chr10 116894970 116895213 -28694075 - LTR37A LTR ERV1 -171 255 1 214 342 123 0 chr10 116895861 116895975 -28693313 + L2 LINE L2 3177 3304 -9 199 273 30 61 chr10 116896662 116896761 -28692527 + L2 LINE L2 1469 1564 -1750 183 226 29 0 chr10 116897902 116898004 -28691284 + (CA)n Simple_repeat Simple_repeat 2 106 0 21 0 0 0 chr10 116898865 116898886 -28690402 + AT_rich Low_complexity Low_complexity 1 21 0 2242 85 3 33 chr10 116899038 116899343 -28689945 + AluSc SINE Alu 1 296 -13 1649 121 0 0 chr10 116900260 116900483 -28688805 - AluSx SINE Alu -89 223 1 2227 111 3 0 chr10 116901693 116901991 -28687297 + AluSx SINE Alu 1 299 -13 396 0 0 0 chr10 116902149 116902193 -28687095 + (TG)n Simple_repeat Simple_repeat 2 45 0 2495 69 0 3 chr10 116902613 116902919 -28686369 + AluY SINE Alu 1 305 -6 1893 159 36 22 chr10 116903024 116903383 -28685905 - THE1B LTR MaLR 0 364 1 289 273 10 10 chr10 116903788 116903887 -28685401 + L1ME4a LINE L1 5628 5726 -395 799 189 7 14 chr10 116903902 116904045 -28685243 + FRAM SINE Alu 5 146 -30 232 239 80 9 chr10 116904322 116904435 -28684853 + L1ME4a LINE L1 5992 6112 -9 182 333 22 33 chr10 116904846 116904936 -28684352 - L2 LINE L2 0 3313 3225 202 294 59 0 chr10 116904980 116905048 -28684240 + L2 LINE L2 3200 3271 -1 2547 48 0 0 chr10 116905257 116905549 -28683739 + AluY SINE Alu 3 294 -17 1213 266 116 16 chr10 116905896 116906397 -28682891 + MLT1G1 LTR MaLR 1 595 0 2167 86 0 4 chr10 116907435 116907738 -28681550 + AluSc SINE Alu 1 302 0 635 254 93 81 chr10 116911167 116911415 -28677873 - MIR SINE MIR 0 262 12 381 369 61 34 chr10 116911564 116911857 -28677431 + L2 LINE L2 2971 3271 -1 210 135 0 0 chr10 116912685 116912695 -28676593 + (GA)n Simple_repeat Simple_repeat 2 11 -27 2172 107 13 10 chr10 116912695 116913003 -28676285 + AluSc SINE Alu 1 309 0 210 135 0 0 chr10 116913003 116913029 -28676259 + (GA)n Simple_repeat Simple_repeat 10 38 0 912 220 40 0 chr10 116913291 116913464 -28675824 + MER5A DNA MER1_type 1 180 -9 722 276 143 64 chr10 116913874 116914251 -28675037 - L2 LINE L2 0 3313 2907 686 172 8 0 chr10 116914577 116914705 -28674583 + L1PB3 LINE L1 6023 6151 -3 385 254 94 54 chr10 116914796 116915072 -28674216 + L1ME3A LINE L1 4705 4991 -1155 1101 160 0 6 chr10 116915072 116915241 -28674047 + AluSg/x SINE Alu 132 299 -13 1443 271 50 20 chr10 116915254 116916233 -28673055 + L1ME3A LINE L1 4998 6002 -168 1879 125 16 48 chr10 116916370 116916681 -28672607 - AluSx SINE Alu -7 305 5 1218 221 35 70 chr10 116916684 116916900 -28672388 + MER39 LTR ERV1 297 494 -213 2283 72 0 39 chr10 116916900 116917205 -28672083 - AluY SINE Alu -18 293 1 1218 221 35 70 chr10 116917205 116917390 -28671898 + MER39 LTR ERV1 494 684 -23 468 264 7 7 chr10 116917444 116917584 -28671704 + L1ME3A LINE L1 6023 6162 -8 358 326 41 9 chr10 116917667 116917827 -28671461 + MIR SINE MIR 43 212 -50 183 356 0 0 chr10 116918520 116918565 -28670723 - L2 LINE L2 -90 3182 3138 635 67 22 0 chr10 116919950 116920039 -28669249 + AluY SINE Alu 1 91 -220 2175 131 0 6 chr10 116920341 116920654 -28668634 + AluY SINE Alu 1 311 0 21 57 0 0 chr10 116920993 116921028 -28668260 + AT_rich Low_complexity Low_complexity 1 35 0 200 340 123 19 chr10 116921549 116921655 -28667633 - L2 LINE L2 -10 3262 3146 338 274 69 0 chr10 116921881 116921983 -28667305 - MER5A DNA MER1_type 0 189 81 250 300 44 0 chr10 116922173 116922263 -28667025 + MIR SINE MIR 132 225 -37 183 350 50 12 chr10 116922295 116922375 -28666913 - MIR3 SINE MIR -117 91 9 218 245 0 20 chr10 116922912 116922961 -28666327 + MER5A DNA MER1_type 6 53 -136 1783 182 41 23 chr10 116923018 116923058 -28666230 - MSTB1 LTR MaLR -26 406 368 1871 123 0 0 chr10 116923058 116923310 -28665978 + AluSx SINE Alu 57 308 -4 1783 182 41 23 chr10 116923310 116923673 -28665615 - MSTB1 LTR MaLR -64 368 6 587 272 23 42 chr10 116923739 116924004 -28665284 - L1MC5 LINE L1 -72 7889 7630 2235 92 10 0 chr10 116925448 116925741 -28663547 + AluY SINE Alu 1 296 -15 490 112 10 10 chr10 116926123 116926221 -28663067 + (TA)n Simple_repeat Simple_repeat 1 98 0 212 366 98 9 chr10 116926945 116927057 -28662231 + L2 LINE L2 3101 3222 -50 189 74 0 0 chr10 116927082 116927109 -28662179 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 324 321 57 33 chr10 116927437 116927669 -28661619 + MIR SINE MIR 15 246 -16 392 302 32 0 chr10 116927966 116928092 -28661196 + MIR3 SINE MIR 76 205 -3 195 346 0 0 chr10 116928984 116929036 -28660252 - L2 LINE L2 -307 2965 2914 343 289 132 19 chr10 116929349 116929508 -28659780 - MIR SINE MIR 0 262 86 703 237 0 52 chr10 116930712 116930885 -28658403 - FRAM SINE Alu -15 161 1 2099 127 124 18 chr10 116932095 116932482 -28656806 - MSTA LTR MaLR 0 428 1 2382 107 0 0 chr10 116933508 116933818 -28655470 + AluSq SINE Alu 1 310 -3 189 132 0 0 chr10 116934373 116934411 -28654877 + (A)n Simple_repeat Simple_repeat 1 38 0 272 253 0 36 chr10 116934908 116934991 -28654297 - MIR SINE MIR -49 213 134 257 136 80 11 chr10 116934996 116935084 -28654204 + (TA)n Simple_repeat Simple_repeat 2 95 0 232 269 19 0 chr10 116935085 116935137 -28654151 - MIR SINE MIR -181 81 29 969 132 85 11 chr10 116935337 116935526 -28653762 - MER2 DNA MER2_type -142 203 1 2223 111 7 0 chr10 116936074 116936372 -28652916 + AluSx SINE Alu 1 300 -12 2118 120 13 0 chr10 116936933 116937233 -28652055 - AluSx SINE Alu -8 304 1 1296 77 16 0 chr10 116937479 116937662 -28651626 + L1PA4 LINE L1 5968 6153 -2 292 351 75 0 chr10 116937669 116937763 -28651525 + MIR SINE MIR 49 149 -113 2237 66 14 0 chr10 116938174 116938461 -28650827 + AluY SINE Alu 17 307 -4 928 218 210 4 chr10 116938940 116939183 -28650105 + AluJo SINE Alu 3 295 -17 427 265 0 108 chr10 116939690 116939856 -28649432 + MIR SINE MIR 81 228 -34 184 231 0 26 chr10 116939824 116939863 -28649425 + L2 LINE L2 3201 3238 -34 * 376 302 36 57 chr10 116939945 116940276 -28649012 + L1MC4a LINE L1 5584 5907 -1901 238 254 69 31 chr10 116940532 116940662 -28648626 + MLT1K LTR MaLR 411 545 -43 192 206 32 95 chr10 116940944 116941007 -28648281 + MIR SINE MIR 115 173 -89 2208 105 0 0 chr10 116941722 116942007 -28647281 - AluSq SINE Alu -15 298 14 190 236 73 18 chr10 116942912 116942967 -28646321 + L2 LINE L2 3180 3237 -76 234 0 0 0 chr10 116943623 116943649 -28645639 + (A)n Simple_repeat Simple_repeat 1 26 0 2096 112 37 3 chr10 116943652 116943947 -28645341 + AluSg SINE Alu 1 305 -5 203 320 165 0 chr10 116944193 116944296 -28644992 - L2 LINE L2 -494 2820 2701 240 288 183 20 chr10 116944299 116944452 -28644836 - MER5A DNA MER1_type 0 189 12 546 225 33 13 chr10 116944694 116944845 -28644443 - ORSL DNA AcHobo -1 274 121 186 43 0 0 chr10 116944850 116944873 -28644415 + (TG)n Simple_repeat Simple_repeat 2 24 0 235 246 25 25 chr10 116944873 116944889 -28644399 + (TA)n Simple_repeat Simple_repeat 1 16 -106 1355 225 50 27 chr10 116944889 116945058 -28644230 - AluJo SINE Alu -7 305 125 2237 105 3 0 chr10 116945058 116945354 -28643934 - AluSc SINE Alu -12 297 1 1355 225 50 27 chr10 116945354 116945482 -28643806 - AluJo SINE Alu -187 125 1 235 246 25 25 chr10 116945482 116945587 -28643701 + (TA)n Simple_repeat Simple_repeat 15 122 0 292 236 14 0 chr10 116945592 116945664 -28643624 - ORSL DNA AcHobo -200 75 3 2218 132 0 0 chr10 116946088 116946399 -28642889 - AluSx SINE Alu -1 311 1 1693 164 13 23 chr10 116946910 116947209 -28642079 + AluJb SINE Alu 2 297 -15 513 289 47 28 chr10 116947469 116947680 -28641608 + L2 LINE L2 3095 3309 -4 3829 24 9 7 chr10 116948083 116948538 -28640750 + L1PA3 LINE L1 5699 6154 -1 236 149 21 0 chr10 116950098 116950145 -28639143 + CT-rich Low_complexity Low_complexity 1 48 0 497 336 83 29 chr10 116950146 116950423 -28638865 - L2 LINE L2 -5 3308 3017 272 289 87 19 chr10 116950862 116950966 -28638322 - MIR SINE MIR -68 140 30 239 282 39 29 chr10 116951202 116951305 -28637983 - L3 LINE CR1 -865 712 609 203 333 29 67 chr10 116951631 116951736 -28637552 - L2 LINE L2 -8 3305 3205 553 249 40 34 chr10 116953042 116953219 -28636069 - MER5B DNA MER1_type 0 178 1 362 318 86 41 chr10 116953471 116953725 -28635563 - L2 LINE L2 -212 3060 2798 223 311 146 48 chr10 116953860 116954066 -28635222 + MIR SINE MIR 37 262 0 217 263 18 0 chr10 116956697 116956754 -28632534 + CT-rich Low_complexity Low_complexity 5 62 0 786 231 6 0 chr10 116956919 116957092 -28632196 - FAM SINE Alu -1 174 1 2493 70 0 0 chr10 116957149 116957450 -28631838 - AluY SINE Alu -10 301 1 24 0 0 0 chr10 116957513 116957537 -28631751 + AT_rich Low_complexity Low_complexity 1 24 0 691 236 160 2 chr10 116957658 116957862 -28631426 + MIR SINE MIR 21 254 -8 181 350 72 10 chr10 116958860 116958957 -28630331 - L3b LINE CR1 -21 1562 1460 200 158 118 40 chr10 116959407 116959483 -28629805 + MIR SINE MIR 127 208 -54 451 307 26 62 chr10 116961044 116961236 -28628052 - MIR SINE MIR -5 257 73 21 0 0 0 chr10 116961411 116961432 -28627856 + AT_rich Low_complexity Low_complexity 1 21 0 32 26 0 0 chr10 116961534 116961573 -28627715 + AT_rich Low_complexity Low_complexity 1 39 0 188 216 59 0 chr10 116963341 116963392 -28625896 - MIR3 SINE MIR -3 205 152 238 277 101 61 chr10 116963951 116964099 -28625189 - MIR SINE MIR -78 184 31 442 45 0 30 chr10 116964508 116964575 -28624713 + (TTTC)n Simple_repeat Simple_repeat 4 68 0 414 0 0 0 chr10 116964576 116964622 -28624666 + (TCTCC)n Simple_repeat Simple_repeat 2 47 0 1263 171 142 18 chr10 116964622 116964759 -28624529 - AluSg SINE Alu -2 308 189 239 0 0 31 chr10 116964759 116964791 -28624497 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1263 171 142 18 chr10 116964791 116964927 -28624361 - AluSg SINE Alu -121 189 1 399 282 194 0 chr10 116964932 116965102 -28624186 - MIR SINE MIR -48 214 12 824 202 30 75 chr10 116966777 116967012 -28622276 + MIR SINE MIR 16 241 -21 2380 79 0 13 chr10 116967695 116968000 -28621288 + AluY SINE Alu 2 302 -9 2517 74 0 0 chr10 116968473 116968785 -28620503 - AluSq SINE Alu -1 312 1 2345 196 90 12 chr10 116968932 116969376 -28619912 - L1MB7 LINE L1 -21 6163 5662 180 0 0 0 chr10 116969376 116969396 -28619892 + (TG)n Simple_repeat Simple_repeat 1 20 0 2345 196 90 12 chr10 116969396 116969529 -28619759 - L1MB7 LINE L1 -522 5662 5541 850 184 112 4 chr10 116970837 116971070 -28618218 - LTR50 LTR ERVL -6 789 532 879 196 175 0 chr10 116971146 116971437 -28617851 - LTR50 LTR ERVL -452 343 2 321 232 0 0 chr10 116971646 116971741 -28617547 + (TA)n Simple_repeat Simple_repeat 2 96 0 21 0 0 0 chr10 116971809 116971830 -28617458 + AT_rich Low_complexity Low_complexity 1 21 0 202 271 252 19 chr10 116972447 116972554 -28616734 - L2 LINE L2 0 3313 3182 829 266 26 17 chr10 116972605 116972863 -28616425 - MIR SINE MIR 0 262 3 5685 146 49 6 chr10 116972988 116974009 -28615279 - L1MC1 LINE L1 0 6333 5269 25 0 0 0 chr10 116974793 116974818 -28614470 + AT_rich Low_complexity Low_complexity 1 25 0 463 236 111 0 chr10 116975337 116975481 -28613807 - MER103 DNA DNA -4 162 3 478 321 108 21 chr10 116976647 116976887 -28612401 - MIR SINE MIR 0 262 2 24 0 0 0 chr10 116977407 116977431 -28611857 + AT_rich Low_complexity Low_complexity 1 24 0 2344 91 0 3 chr10 116978054 116978351 -28610937 + AluY SINE Alu 1 296 -15 471 352 67 0 chr10 116980053 116980263 -28609025 - MIR SINE MIR -38 224 1 210 128 0 0 chr10 116981412 116981451 -28607837 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2074 135 16 13 chr10 116981576 116981887 -28607401 - AluSx SINE Alu 0 312 1 1831 93 0 16 chr10 116981988 116982246 -28607042 + AluY SINE Alu 55 308 -3 2248 85 9 35 chr10 116983196 116983513 -28605775 - AluY SINE Alu -2 309 1 29 28 0 0 chr10 116983697 116983733 -28605555 + AT_rich Low_complexity Low_complexity 1 36 0 182 146 0 36 chr10 116984232 116984287 -28605001 + (CAGAGA)n Simple_repeat Simple_repeat 2 54 0 186 308 29 96 chr10 116985587 116985691 -28603597 + MIR SINE MIR 1 97 -165 2300 89 3 0 chr10 116985862 116986165 -28603123 + AluY SINE Alu 5 308 -3 210 337 54 11 chr10 116986636 116986728 -28602560 + MIR SINE MIR 151 246 -16 1755 71 119 4 chr10 116987017 116987298 -28601990 - AluYa8 SINE Alu 0 310 1 251 320 48 10 chr10 116988635 116988738 -28600550 + L2 LINE L2 3166 3272 0 273 57 0 0 chr10 116990030 116990065 -28599223 + (CA)n Simple_repeat Simple_repeat 2 36 0 217 301 12 12 chr10 116991120 116991203 -28598085 + L3b LINE CR1 1116 1198 -385 207 0 0 0 chr10 116991994 116992017 -28597271 + (A)n Simple_repeat Simple_repeat 1 23 0 282 316 11 42 chr10 116992197 116992292 -28596996 - MIR SINE MIR -169 93 2 813 290 78 65 chr10 116992314 116992503 -28596785 + L2 LINE L2 2527 2712 -601 2153 110 0 23 chr10 116992503 116992804 -28596484 + AluSc SINE Alu 1 294 -15 813 290 78 65 chr10 116992804 116993359 -28595929 + L2 LINE L2 2712 3294 -19 190 340 43 32 chr10 116995402 116995496 -28593792 + MIR SINE MIR 16 110 -152 2289 101 3 0 chr10 116995616 116995922 -28593366 - AluSx SINE Alu -5 307 1 185 286 36 18 chr10 116996419 116996475 -28592813 + MIR SINE MIR 92 148 -60 610 248 79 25 chr10 116996854 116997056 -28592232 + LTR33 LTR ERVL 303 515 -6 344 361 53 0 chr10 116998000 116998133 -28591155 - MIR3 SINE MIR -63 145 6 206 61 0 30 chr10 116998662 116998695 -28590593 + (TTAAA)n Simple_repeat Simple_repeat 1 32 0 483 221 63 16 chr10 116998696 116998823 -28590465 - MER3 DNA MER1_type -76 133 1 366 349 46 0 chr10 116998972 116999081 -28590207 - L2 LINE L2 -22 3250 3137 2480 58 0 3 chr10 116999403 116999698 -28589590 + AluY SINE Alu 1 294 -17 281 260 40 30 chr10 117001816 117001916 -28587372 - MLT1K LTR MaLR -3 585 485 477 334 75 40 chr10 117001933 117002436 -28586852 - MLT1K LTR MaLR -65 523 3 2054 158 36 31 chr10 117003134 117003679 -28585609 - MLT2A2 LTR ERVL 0 554 1 268 200 83 0 chr10 117004146 117004206 -28585082 + L2 LINE L2 3205 3269 -3 1658 214 5 27 chr10 117004510 117004880 -28584408 + MLT1A1 LTR MaLR 4 365 0 2267 205 38 6 chr10 117004881 117005378 -28583910 + MLT1A1-int LTR MaLR 1 513 -1222 1408 324 15 9 chr10 117005381 117006036 -28583252 + L1M3a LINE L1 11 782 -5173 2398 155 46 7 chr10 117006044 117006456 -28582832 - MSTA LTR MaLR 0 428 1 7983 168 16 67 chr10 117006456 117008197 -28581091 - MSTA-int LTR MaLR 0 1651 1 2121 174 47 38 chr10 117008197 117008621 -28580667 - MSTA LTR MaLR 0 428 1 11600 221 52 24 chr10 117008624 117011324 -28577964 + L1MB1 LINE L1 392 3014 -3063 2309 99 0 13 chr10 117011324 117011636 -28577652 + AluSc SINE Alu 1 308 -1 11600 221 52 24 chr10 117011636 117014637 -28574651 + L1MB1 LINE L1 3014 5954 -123 469 178 37 0 chr10 117014654 117014761 -28574527 + L1MA9 LINE L1 6180 6290 -22 565 173 0 0 chr10 117014961 117015065 -28574223 + MLT-int LTR MaLR 498 601 -1134 271 138 35 17 chr10 117015250 117015308 -28573980 + MLT-int LTR MaLR 680 738 -997 1867 185 19 40 chr10 117015505 117015933 -28573355 + MLT1A1-int LTR MaLR 1317 1735 0 1994 171 34 8 chr10 117015933 117016289 -28572999 + MLT1A1 LTR MaLR 1 365 0 246 295 78 31 chr10 117016758 117016887 -28572401 + MLT1I LTR MaLR 135 269 -140 186 303 30 0 chr10 117017574 117017640 -28571648 - MIR SINE MIR -121 141 74 249 302 0 0 chr10 117018193 117018256 -28571032 + L2 LINE L2 3210 3272 0 322 324 160 19 chr10 117018951 117019164 -28570124 + MIR SINE MIR 6 248 -14 21 57 0 0 chr10 117019814 117019849 -28569439 + AT_rich Low_complexity Low_complexity 1 35 0 207 204 0 0 chr10 117020990 117021034 -28568254 + A-rich Low_complexity Low_complexity 1 44 0 416 310 41 14 chr10 117021559 117021704 -28567584 + MIR SINE MIR 1 149 -113 2395 68 0 29 chr10 117021712 117022022 -28567266 + AluY SINE Alu 6 306 -5 201 196 22 0 chr10 117022617 117022663 -28566625 + A-rich Low_complexity Low_complexity 2 48 0 2320 114 0 0 chr10 117022853 117023160 -28566128 - AluSc SINE Alu -2 307 1 198 0 0 0 chr10 117024135 117024157 -28565131 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 377 307 9 9 chr10 117025728 117025879 -28563409 + MIR SINE MIR 7 156 -65 352 283 200 28 chr10 117026318 117026522 -28562766 + MIR SINE MIR 3 244 -18 1140 172 12 31 chr10 117028689 117028945 -28560343 - L1MB4 LINE L1 -13 6167 5917 1793 147 28 7 chr10 117029350 117029636 -28559652 + AluSx SINE Alu 1 292 -20 180 137 59 0 chr10 117030031 117030082 -28559206 + CT-rich Low_complexity Low_complexity 1 54 0 24 32 0 0 chr10 117030755 117030786 -28558502 + AT_rich Low_complexity Low_complexity 1 31 0 473 161 161 32 chr10 117030899 117031054 -28558234 - LTR48 LTR ERV1 -4 783 609 1017 193 119 17 chr10 117031102 117031489 -28557799 - LTR48 LTR ERV1 -328 459 1 183 129 0 0 chr10 117031965 117031996 -28557292 + (TAG)n Simple_repeat Simple_repeat 1 31 0 2276 82 0 3 chr10 117032268 117032559 -28556729 + AluY SINE Alu 1 290 -21 233 314 314 0 chr10 117032881 117032986 -28556302 + L2 LINE L2 3127 3264 -8 262 303 138 46 chr10 117033153 117033262 -28556026 + L2 LINE L2 3136 3254 -18 245 315 22 22 chr10 117034419 117034508 -28554780 - MIR SINE MIR -70 138 50 * 594 314 95 16 chr10 117034497 117034739 -28554549 - MIR SINE MIR 0 262 2 229 258 79 0 chr10 117035419 117035492 -28553796 + L1ME LINE L1 5688 5765 -397 2373 87 7 0 chr10 117035493 117035792 -28553496 + AluSp SINE Alu 1 301 -12 361 325 43 0 chr10 117035824 117035941 -28553347 + L2 LINE L2 3188 3309 -4 193 259 0 17 chr10 117036019 117036077 -28553211 + L2 LINE L2 3257 3313 0 183 184 0 0 chr10 117037424 117037462 -28551826 + GA-rich Low_complexity Low_complexity 2 39 0 424 295 114 29 chr10 117037713 117037923 -28551365 - MIR SINE MIR -2 260 33 492 329 24 6 chr10 117038677 117038867 -28550421 - MIR SINE MIR -35 227 34 311 273 0 13 chr10 117038941 117039018 -28550270 + MIR3 SINE MIR 101 176 -32 419 338 33 0 chr10 117040690 117040841 -28548447 - MIR3 SINE MIR -35 173 18 215 355 85 33 chr10 117041082 117041233 -28548055 + L2 LINE L2 2608 2750 -564 1652 159 36 20 chr10 117041233 117041406 -28547882 - AluJb SINE Alu -6 306 124 2233 107 0 7 chr10 117041406 117041715 -28547573 - AluSg SINE Alu -3 307 1 1652 159 36 20 chr10 117041715 117041842 -28547446 - AluJb SINE Alu -188 124 1 215 355 85 33 chr10 117041842 117042020 -28547268 + L2 LINE L2 2750 2954 -360 220 387 32 8 chr10 117044394 117044518 -28544770 + L2 LINE L2 3145 3271 -1 335 157 0 238 chr10 117044563 117044710 -28544578 + MIR SINE MIR 2 113 -149 352 212 202 0 chr10 117044814 117044913 -28544375 + MIR SINE MIR 144 262 0 299 96 19 0 chr10 117045392 117045444 -28543844 + (TC)n Simple_repeat Simple_repeat 2 54 0 1447 194 104 0 chr10 117046156 117046465 -28542823 - MER58B DNA MER1_type 0 341 1 401 288 48 118 chr10 117047814 117048127 -28541161 + L2 LINE L2 2967 3257 -15 2624 107 11 5 chr10 117048509 117048882 -28540406 + THE1C LTR MaLR 1 375 0 4591 174 48 66 chr10 117048882 117049258 -28540030 + THE1C-int LTR MaLR 1 383 -1197 2603 86 17 0 chr10 117049258 117049607 -28539681 - THE1A LTR MaLR 0 355 1 4591 174 48 66 chr10 117049607 117050406 -28538882 + THE1C-int LTR MaLR 383 1154 -426 2027 142 0 7 chr10 117050415 117050717 -28538571 + THE1C LTR MaLR 76 375 0 250 217 51 43 chr10 117050800 117050938 -28538350 + (TCTCTG)n Simple_repeat Simple_repeat 5 143 0 198 286 0 0 chr10 117050951 117051021 -28538267 + CT-rich Low_complexity Low_complexity 4 73 0 21 57 0 0 chr10 117051665 117051700 -28537588 + AT_rich Low_complexity Low_complexity 1 35 0 2242 99 30 0 chr10 117051903 117052206 -28537082 - AluSx SINE Alu 0 312 1 543 238 41 7 chr10 117052766 117052913 -28536375 - MIR SINE MIR -62 200 49 249 324 73 29 chr10 117053233 117053369 -28535919 + MER5B DNA MER1_type 2 143 -35 526 260 95 35 chr10 117054152 117054383 -28534905 + MIR SINE MIR 15 259 -3 366 229 57 82 chr10 117056529 117056651 -28532637 + L2 LINE L2 3149 3267 -5 188 341 22 22 chr10 117056639 117056730 -28532558 + MIR SINE MIR 172 262 0 * 217 379 40 8 chr10 117057258 117057382 -28531906 - MIR3 SINE MIR -49 159 32 419 291 121 29 chr10 117057403 117057609 -28531679 - MIR SINE MIR -3 259 35 479 289 30 19 chr10 117058174 117058391 -28530897 + MIR SINE MIR 26 245 -17 183 42 0 0 chr10 117061407 117061431 -28527857 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 309 26 0 0 chr10 117062095 117062133 -28527155 + (TG)n Simple_repeat Simple_repeat 2 39 0 204 336 67 10 chr10 117062336 117062440 -28526848 + L2 LINE L2 3159 3268 -4 499 233 83 8 chr10 117062586 117062719 -28526569 + MIR3 SINE MIR 65 207 -1 194 255 0 20 chr10 117063793 117063844 -28525444 + L2 LINE L2 2662 2711 -603 24 0 0 0 chr10 117064167 117064191 -28525097 + AT_rich Low_complexity Low_complexity 1 24 0 278 319 53 0 chr10 117064293 117064406 -28524882 + L2 LINE L2 2570 2688 -626 242 164 18 0 chr10 117064578 117064633 -28524655 + (TA)n Simple_repeat Simple_repeat 1 56 0 353 325 98 57 chr10 117064752 117065351 -28523937 + L2 LINE L2 2677 3302 -11 377 267 136 72 chr10 117065426 117065647 -28523641 - MIR SINE MIR -27 235 1 213 244 0 0 chr10 117065665 117065710 -28523578 - MIR SINE MIR 0 262 218 210 242 0 32 chr10 117066299 117066361 -28522927 + MIR SINE MIR 128 187 -75 292 322 263 0 chr10 117067690 117067895 -28521393 + MIR SINE MIR 2 260 -2 1909 123 67 0 chr10 117068322 117068606 -28520682 - AluSx SINE Alu -9 303 1 304 335 93 22 chr10 117069294 117069476 -28519812 + L2 LINE L2 3078 3272 0 29 28 0 0 chr10 117069735 117069771 -28519517 + AT_rich Low_complexity Low_complexity 1 36 0 459 200 73 78 chr10 117069823 117070028 -28519260 - L1ME3 LINE L1 -74 6088 5885 1308 177 14 41 chr10 117070034 117070328 -28518960 + L1MA9 LINE L1 5989 6274 -38 772 285 75 35 chr10 117070341 117070797 -28518491 - L1M4 LINE L1 -975 5171 4698 2055 263 118 80 chr10 117070804 117071010 -28518278 - L1M4 LINE L1 -1499 4647 4450 2437 62 0 10 chr10 117071010 117071316 -28517972 - AluY SINE Alu -8 303 1 2055 263 118 80 chr10 117071316 117072241 -28517047 - L1M4 LINE L1 -1696 4450 3562 1974 125 7 4 chr10 117072241 117072545 -28516743 - AluSx SINE Alu 0 305 1 2055 263 118 80 chr10 117072545 117073138 -28516150 - L1M4 LINE L1 -2584 3562 2993 1683 165 10 29 chr10 117073138 117073447 -28515841 - AluJo SINE Alu -4 308 6 2055 263 118 80 chr10 117073447 117074016 -28515272 - L1M4 LINE L1 -3153 2993 2263 894 164 72 62 chr10 117074079 117074287 -28515001 - L1MD1 LINE L1 -4 6632 6423 281 68 0 119 chr10 117074295 117074354 -28514934 - L1MA7 LINE L1 -3 6288 6237 * 413 169 0 0 chr10 117074334 117074411 -28514877 + L1MA7 LINE L1 6063 6139 -152 844 154 47 0 chr10 117074426 117074595 -28514693 - L1MA4 LINE L1 -8 6292 6116 2681 93 26 3 chr10 117074600 117074987 -28514301 + L1PA11 LINE L1 5779 6174 0 4315 123 26 71 chr10 117074988 117075316 -28513972 - L1MA4A LINE L1 -175 6128 5787 1838 137 40 18 chr10 117075316 117075594 -28513694 - AluSx SINE Alu -23 289 6 4315 123 26 71 chr10 117075594 117076071 -28513217 - L1MA4A LINE L1 -516 5787 5359 575 178 42 0 chr10 117076058 117076176 -28513112 + L1MA7 LINE L1 6110 6232 -59 * 747 203 128 5 chr10 117076173 117076360 -28512928 - L1MD1 LINE L1 -200 6436 6227 1259 209 65 21 chr10 117076368 117076716 -28512572 - L1MD1 LINE L1 -715 5921 5533 1917 162 7 3 chr10 117076716 117077024 -28512264 - AluJo SINE Alu -3 309 1 1259 209 65 21 chr10 117077024 117077276 -28512012 - L1MD1 LINE L1 -1103 5533 5294 693 248 15 4 chr10 117077288 117077558 -28511730 - L1MD1 LINE L1 -2848 3692 3420 4924 115 34 95 chr10 117077560 117078559 -28510729 - Tigger3b DNA MER2_type 0 1231 294 2720 165 10 17 chr10 117078559 117079081 -28510207 + L1MA3 LINE L1 5787 6304 -1 2107 191 37 7 chr10 117079095 117079555 -28509733 + L1MB1 LINE L1 5315 5788 -380 * 8006 192 9 17 chr10 117079552 117081228 -28508060 + L1PA14 LINE L1 3068 4730 -1416 568 172 0 0 chr10 117081225 117081318 -28507970 - L1P LINE L1 -2338 3808 3716 * 5574 124 25 0 chr10 117081322 117082720 -28506568 + L1PA14 LINE L1 4734 6160 -1 2025 153 23 31 chr10 117082720 117083108 -28506180 + L1MB1 LINE L1 5769 6156 -12 3025 246 73 27 chr10 117083157 117084026 -28505262 - L1MD1 LINE L1 -4823 1717 889 2259 183 32 0 chr10 117084026 117084436 -28504852 + MSTB LTR MaLR 1 423 -3 3025 246 73 27 chr10 117084436 117085138 -28504150 - L1MD1 LINE L1 -5651 889 1 261 226 47 19 chr10 117085648 117085754 -28503534 - L1ME LINE L1 -5009 1375 1267 650 69 17 26 chr10 117085945 117086061 -28503227 + (TTTC)n Simple_repeat Simple_repeat 1 115 0 1775 169 0 0 chr10 117086061 117086340 -28502948 - AluJo SINE Alu -33 279 1 300 282 26 13 chr10 117087100 117087178 -28502110 - L1ME LINE L1 -5954 418 340 725 235 13 0 chr10 117087656 117087805 -28501483 + MER5A DNA MER1_type 38 188 -1 259 186 0 0 chr10 117087806 117087849 -28501439 - MER5A DNA MER1_type -146 43 1 205 263 140 0 chr10 117087849 117087901 -28501387 + L2 LINE L2 3203 3262 -10 574 233 200 0 chr10 117088159 117088309 -28500979 + MER5A DNA MER1_type 10 189 0 331 348 0 0 chr10 117088498 117088633 -28500655 + (TATATG)n Simple_repeat Simple_repeat 4 138 0 270 314 59 0 chr10 117089922 117090024 -28499264 + MIR3 SINE MIR 62 169 -39 301 316 1 12 chr10 117090075 117090175 -28499113 + MIR SINE MIR 44 143 -65 1721 221 50 27 chr10 117090236 117090721 -28498567 + MLT1D LTR MaLR 10 505 0 196 360 111 6 chr10 117090846 117091018 -28498270 - L3b LINE CR1 -18 1565 1376 581 222 252 4 chr10 117091278 117091508 -28497780 + LTR50 LTR ERVL 35 321 -474 276 283 26 9 chr10 117091570 117091683 -28497605 + LTR50 LTR ERVL 428 542 -253 254 252 27 27 chr10 117092638 117092749 -28496539 + MERVL LTR ERVL 811 921 -4564 2112 104 3 30 chr10 117092749 117093047 -28496241 - AluSc SINE Alu -19 290 1 1105 179 58 80 chr10 117093115 117093478 -28495810 + MLT1A1 LTR MaLR 11 365 0 2089 312 57 59 chr10 117093626 117094415 -28494873 + MERVL LTR ERVL 1233 2022 -3742 1867 164 128 13 chr10 117094415 117094799 -28494489 - MSTA LTR MaLR 0 428 1 2089 312 57 59 chr10 117094799 117095859 -28493429 + MERVL LTR ERVL 2022 3078 -2686 439 289 68 51 chr10 117095973 117096267 -28493021 + LTR50 LTR ERVL 386 684 -111 261 317 18 73 chr10 117098201 117098365 -28490923 + MIR SINE MIR 108 262 0 1588 155 56 0 chr10 117098432 117098683 -28490605 - AluJb SINE Alu -47 265 1 631 278 83 0 chr10 117098851 117099067 -28490221 + L1MC4 LINE L1 6367 6600 -1442 3021 166 7 29 chr10 117099101 117099661 -28489627 + MER44D DNA MER2_type 3 605 0 848 299 26 26 chr10 117100204 117100588 -28488700 + L1MC4 LINE L1 7377 7760 -282 4711 124 7 7 chr10 117100595 117101346 -28487942 + L1PA10 LINE L1 5402 6152 -16 779 248 28 24 chr10 117101352 117101642 -28487646 + L1MC4 LINE L1 7747 8037 -5 2403 86 3 0 chr10 117102103 117102407 -28486881 - AluSp SINE Alu -8 305 1 584 197 43 75 chr10 117102434 117102622 -28486666 + MIR SINE MIR 59 240 -22 632 321 90 67 chr10 117104478 117105066 -28484222 + L2 LINE L2 2686 3272 0 34 24 0 0 chr10 117105387 117105428 -28483860 + AT_rich Low_complexity Low_complexity 1 41 0 225 94 0 0 chr10 117106067 117106099 -28483189 + (T)n Simple_repeat Simple_repeat 1 32 0 1250 193 29 30 chr10 117106166 117106602 -28482686 + MLT1D LTR MaLR 1 505 0 294 73 0 0 chr10 117106979 117107020 -28482268 + (GA)n Simple_repeat Simple_repeat 1 41 0 3904 209 28 7 chr10 117107175 117108072 -28481216 - L1P LINE L1 -1526 4620 3705 1082 196 59 36 chr10 117108187 117108493 -28480795 - THE1C LTR MaLR -62 313 1 331 258 47 23 chr10 117108555 117108683 -28480605 - L1MC4a LINE L1 -933 6875 6745 2027 145 33 38 chr10 117109679 117110044 -28479244 - THE1B LTR MaLR -1 363 1 10680 92 4 39 chr10 117110044 117111681 -28477607 - THE1B-int LTR MaLR 0 1580 1 1860 162 36 38 chr10 117111681 117112046 -28477242 - THE1B LTR MaLR 0 364 1 204 231 19 0 chr10 117113588 117113640 -28475648 + CT-rich Low_complexity Low_complexity 1 53 0 654 161 148 26 chr10 117114175 117114330 -28474958 + MER58A DNA MER1_type 46 219 -5 213 94 0 0 chr10 117114520 117114552 -28474736 + (TTA)n Simple_repeat Simple_repeat 1 32 0 430 259 32 25 chr10 117114597 117114760 -28474528 - MIR SINE MIR -63 145 38 23 33 0 0 chr10 117116070 117116100 -28473188 + AT_rich Low_complexity Low_complexity 1 30 0 562 321 21 10 chr10 117116721 117116914 -28472374 - LTR16A LTR ERVL -63 387 193 911 130 0 0 chr10 117117275 117117406 -28471882 - FLAM_C SINE Alu -2 131 1 1064 330 46 52 chr10 117117578 117118631 -28470657 - HERV16 LTR ERVL -655 5109 4064 1239 315 57 27 chr10 117118668 117119606 -28469682 - HERV16 LTR ERVL -1943 3053 2646 719 298 36 11 chr10 117119573 117120081 -28469207 - HERV16 LTR ERVL -3657 1339 748 * 2164 156 28 11 chr10 117120092 117120450 -28468838 - THE1B LTR MaLR 0 364 1 779 304 35 29 chr10 117120503 117120848 -28468440 - HERV16 LTR ERVL -4340 656 310 2129 121 0 7 chr10 117120868 117121165 -28468123 - AluSg SINE Alu 0 310 16 646 287 118 11 chr10 117121828 117122208 -28467080 + L1ME3 LINE L1 5740 6160 -2 413 203 29 29 chr10 117122379 117122517 -28466771 - L1ME LINE L1 -397 5765 5628 197 196 0 43 chr10 117122522 117122568 -28466720 + L2 LINE L2 3269 3312 -1 22 35 0 0 chr10 117123177 117123206 -28466082 + AT_rich Low_complexity Low_complexity 1 29 0 2388 89 0 10 chr10 117123409 117123723 -28465565 - AluY SINE Alu 0 311 1 21 0 0 0 chr10 117124449 117124470 -28464818 + AT_rich Low_complexity Low_complexity 1 21 0 22 70 0 0 chr10 117125002 117125045 -28464243 + AT_rich Low_complexity Low_complexity 1 43 0 273 240 40 0 chr10 117125125 117125200 -28464088 + (TA)n Simple_repeat Simple_repeat 1 78 0 720 260 41 47 chr10 117125269 117125608 -28463680 - L1ME3A LINE L1 -102 6068 5732 1907 187 66 42 chr10 117125726 117126228 -28463060 - MER67D LTR ERV1 0 514 1 204 277 0 0 chr10 117127215 117127262 -28462026 + (TG)n Simple_repeat Simple_repeat 2 48 0 4610 122 17 33 chr10 117127310 117128091 -28461197 + MER4E LTR ERV1 1 768 -11 2525 235 10 18 chr10 117128223 117129006 -28460282 - L1PA13 LINE L1 -2401 4396 3620 3888 224 72 14 chr10 117129008 117129797 -28459491 - L1PA13 LINE L1 -3521 3276 2534 1955 148 26 13 chr10 117129797 117130102 -28459186 + AluSx SINE Alu 1 309 -3 3888 224 72 14 chr10 117130102 117131193 -28458095 - L1PA13 LINE L1 -4263 2534 1269 2849 263 11 44 chr10 117131302 117132160 -28457128 - L1PA13 LINE L1 -5958 829 1 206 228 127 13 chr10 117132909 117132988 -28456300 - MIR SINE MIR -84 124 37 185 128 0 26 chr10 117133443 117133482 -28455806 + (TAAAAA)n Simple_repeat Simple_repeat 1 38 0 225 345 97 35 chr10 117134096 117134209 -28455079 - L2 LINE L2 -10 3262 3143 1694 156 6 55 chr10 117134962 117135290 -28453998 + AluSx SINE Alu 1 312 0 440 290 48 20 chr10 117135317 117135569 -28453719 + L1ME3A LINE L1 4886 5144 -1002 709 329 43 3 chr10 117135578 117135900 -28453388 + LTR16A LTR ERVL 7 341 -109 1719 260 71 56 chr10 117135986 117136081 -28453207 + L1ME3A LINE L1 5139 5231 -939 1725 174 3 23 chr10 117136081 117136380 -28452908 + AluJo SINE Alu 1 293 -19 1719 260 71 56 chr10 117136380 117137298 -28451990 + L1ME3A LINE L1 5231 6162 -8 369 0 0 0 chr10 117137318 117137359 -28451929 + (TC)n Simple_repeat Simple_repeat 1 41 0 252 192 19 0 chr10 117137408 117137460 -28451828 - MER5B DNA MER1_type -123 55 3 1560 267 29 50 chr10 117138073 117138827 -28450461 - L1MC4 LINE L1 -239 7803 7066 390 119 0 15 chr10 117138832 117138899 -28450389 - MSTA LTR MaLR -2 426 361 1130 283 47 15 chr10 117139129 117139472 -28449816 - LTR16A LTR ERVL 0 450 97 931 226 31 13 chr10 117139611 117139837 -28449451 + MER96B DNA MER1_type? 6 235 -182 215 241 17 0 chr10 117140644 117140702 -28448586 + CT-rich Low_complexity Low_complexity 2 60 0 599 265 32 124 chr10 117140966 117141403 -28447885 - LTR16A1 LTR ERVL 0 457 61 1097 195 27 4 chr10 117141784 117142045 -28447243 - L1MA8 LINE L1 0 6291 6025 7412 41 1 0 chr10 117142053 117143547 -28445741 - L1PA5 LINE L1 -6 6148 4653 561 359 73 50 chr10 117143674 117144251 -28445037 - HERV16 LTR ERVL -3929 1067 478 709 276 109 18 chr10 117144404 117144679 -28444609 - HERV16 LTR ERVL -4695 301 2 470 298 29 23 chr10 117144680 117144851 -28444437 - LTR16A1 LTR ERVL 0 457 286 308 342 68 5 chr10 117146522 117146712 -28442576 - MIR SINE MIR -9 253 52 300 272 0 0 chr10 117146821 117146902 -28442386 + L2 LINE L2 3231 3311 -2 2280 104 0 0 chr10 117147074 117147382 -28441906 - AluSg SINE Alu -2 308 1 422 249 128 27 chr10 117147494 117147831 -28441457 + L1M4 LINE L1 2980 3350 -2796 3438 263 50 18 chr10 117147840 117149006 -28440282 + L1M4 LINE L1 6 2063 -4896 3256 263 27 8 chr10 117148997 117150065 -28439223 + L1M4 LINE L1 4410 5498 -1459 * 12734 189 31 25 chr10 117150051 117154584 -28434704 + L1PB1 LINE L1 2923 7585 -4 592 96 53 0 chr10 117154584 117154678 -28434610 - Tigger1 DNA MER2_type -105 2313 2215 237 33 0 0 chr10 117154678 117154708 -28434580 + (CAA)n Simple_repeat Simple_repeat 2 31 0 3568 261 54 30 chr10 117154718 117156009 -28433279 + L1M4 LINE L1 3528 4864 -1282 243 0 0 0 chr10 117156009 117156036 -28433252 + (TG)n Simple_repeat Simple_repeat 2 28 0 3568 261 54 30 chr10 117156036 117156327 -28432961 + L1M4 LINE L1 4864 5147 -999 1994 108 10 51 chr10 117156344 117156658 -28432630 + AluSx SINE Alu 1 301 -11 2256 81 0 0 chr10 117156666 117156949 -28432339 + AluY SINE Alu 16 298 -13 359 326 54 0 chr10 117157397 117157526 -28431762 - MIR SINE MIR -9 253 118 264 122 0 0 chr10 117159057 117159098 -28430190 + (A)n Simple_repeat Simple_repeat 1 41 0 367 239 54 0 chr10 117159379 117159471 -28429817 + LTR16A LTR ERVL 276 372 -78 278 303 26 39 chr10 117159596 117159751 -28429537 - L1MEc LINE L1 -4680 1883 1731 387 308 179 42 chr10 117159812 117160629 -28428659 - L1MEc LINE L1 -4756 1626 754 1771 178 36 3 chr10 117161154 117161486 -28427802 - MER2 DNA MER2_type 0 344 2 2304 105 0 3 chr10 117161752 117162066 -28427222 - AluSq SINE Alu 0 313 1 241 303 37 46 chr10 117163806 117163915 -28425373 + MIR SINE MIR 85 192 -70 185 0 40 0 chr10 117163974 117163999 -28425289 + (TTA)n Simple_repeat Simple_repeat 3 28 0 1568 219 62 7 chr10 117164985 117165331 -28423957 - MLT1A1 LTR MaLR 0 365 1 268 261 6 171 chr10 117165466 117165642 -28423646 + MIR SINE MIR 45 191 -71 1762 233 66 27 chr10 117165663 117166149 -28423139 - MLT1D LTR MaLR 0 505 1 1002 221 68 57 chr10 117166396 117166683 -28422605 - MER76 LTR ERV -42 646 364 3821 173 18 17 chr10 117166683 117167465 -28421823 - L1MA7 LINE L1 0 6291 5509 1002 221 68 57 chr10 117167465 117167761 -28421527 - MER76 LTR ERV -324 364 6 2349 91 83 11 chr10 117169347 117169697 -28419591 - MER51B LTR ERV1 0 377 3 270 349 97 29 chr10 117169752 117170264 -28419024 + L2 LINE L2 2767 3305 -8 781 246 58 0 chr10 117170699 117170890 -28418398 - MER63A DNA MER1_type 0 210 9 189 107 0 0 chr10 117172012 117172040 -28417248 + (TTTTC)n Simple_repeat Simple_repeat 3 30 0 380 300 138 0 chr10 117172527 117172657 -28416631 + MIR3 SINE MIR 50 197 -11 526 265 106 7 chr10 117172887 117173038 -28416250 - MIR SINE MIR -25 237 72 215 0 67 0 chr10 117173613 117173643 -28415645 + (TTTA)n Simple_repeat Simple_repeat 3 34 0 4508 117 6 1 chr10 117175353 117176048 -28413240 - L1PA7 LINE L1 -2180 3966 3269 10066 90 11 12 chr10 117176049 117178229 -28411059 + L1PA7 LINE L1 3956 6136 -18 189 281 0 53 chr10 117179166 117179223 -28410065 + MIR3 SINE MIR 6 59 -149 567 0 0 0 chr10 117179869 117179932 -28409356 + (CATTC)n Simple_repeat Simple_repeat 4 66 0 334 242 33 0 chr10 117180003 117180123 -28409165 + MER69 DNA AcHobo 2396 2519 -7 10989 167 76 10 chr10 117180396 117183833 -28405455 - L1MA2 LINE L1 0 7723 4045 * 14153 177 43 15 chr10 117183830 117184031 -28405257 - L1MA2 LINE L1 -4821 2744 2550 2091 108 7 0 chr10 117184031 117184309 -28404979 - AluSx SINE Alu -22 290 11 14153 177 43 15 chr10 117184309 117186760 -28402528 - L1MA2 LINE L1 -5015 2550 17 2669 212 26 36 chr10 117188055 117188685 -28400603 - L1 LINE L1 -2480 3666 3046 1560 212 3 0 chr10 117188685 117188973 -28400315 - AluJo SINE Alu -1 311 23 2669 212 26 36 chr10 117188973 117189219 -28400069 - L1 LINE L1 -3100 3046 2799 * 3891 201 25 32 chr10 117189214 117189429 -28399859 + L1MA9 LINE L1 4994 5209 -1103 5113 146 12 6 chr10 117189429 117190644 -28398644 + L1PA16 LINE L1 4927 6150 -16 3891 201 25 32 chr10 117190644 117191718 -28397570 + L1MA9 LINE L1 5209 6274 -38 839 95 0 0 chr10 117191827 117191953 -28397335 + L1P4 LINE L1 5327 5452 -716 449 267 23 105 chr10 117192848 117193200 -28396088 + HAL1b LINE L1 279 601 -747 401 0 20 0 chr10 117193321 117193370 -28395918 + (TG)n Simple_repeat Simple_repeat 1 50 0 2017 174 72 13 chr10 117193952 117194343 -28394945 - MLT2D LTR ERVL 0 414 1 228 346 67 48 chr10 117194476 117194745 -28394543 + L2 LINE L2 858 1131 -2183 1029 296 74 37 chr10 117194747 117195261 -28394027 + L2 LINE L2 2216 2748 -566 1597 253 57 26 chr10 117195267 117195602 -28393686 + L1ME1 LINE L1 5523 5912 -289 1060 252 81 23 chr10 117195602 117195995 -28393293 + LTR52 LTR ERVL 4 419 -2 1597 253 57 26 chr10 117195995 117196219 -28393069 + L1ME1 LINE L1 5912 6128 -73 195 42 0 0 chr10 117196223 117196247 -28393041 + (CA)n Simple_repeat Simple_repeat 2 25 0 356 218 117 69 chr10 117196256 117196444 -28392844 + L1MD3 LINE L1 7788 7984 -11 460 341 54 17 chr10 117196463 117196712 -28392576 + L2 LINE L2 2736 2992 -321 275 356 10 0 chr10 117196898 117197002 -28392286 - L2 LINE L2 -260 3053 2949 1135 89 169 46 chr10 117197004 117197241 -28392047 + L1PA11 LINE L1 5909 6174 0 821 148 17 6 chr10 117197253 117197429 -28391859 + GA-rich Low_complexity Low_complexity 1 178 0 2529 74 0 0 chr10 117198601 117198912 -28390376 + AluY SINE Alu 1 311 0 652 365 91 19 chr10 117200159 117200750 -28388538 + L2 LINE L2 2684 3312 -1 314 293 122 31 chr10 117200983 117201205 -28388083 - MIR SINE MIR 0 262 21 212 324 0 0 chr10 117201679 117201747 -28387541 + A-rich Low_complexity Low_complexity 1 68 0 732 262 60 24 chr10 117201772 117202020 -28387268 - MIR SINE MIR -1 261 5 1442 168 20 107 chr10 117203488 117203880 -28385408 + MLT1A1 LTR MaLR 8 365 0 209 302 0 16 chr10 117204557 117204620 -28384668 - MIR SINE MIR -114 94 33 338 160 11 96 chr10 117204684 117204778 -28384510 - L2 LINE L2 -18 3295 3210 260 390 160 6 chr10 117204812 117205143 -28384145 - L2 LINE L2 -542 2772 2391 22 0 0 0 chr10 117205683 117205705 -28383583 + AT_rich Low_complexity Low_complexity 1 22 0 2008 130 21 0 chr10 117205712 117205996 -28383292 + AluSx SINE Alu 1 290 -22 508 14 14 14 chr10 117205997 117206067 -28383221 + (TCTA)n Simple_repeat Simple_repeat 3 72 0 231 36 0 0 chr10 117206067 117206095 -28383193 + (GA)n Simple_repeat Simple_repeat 1 28 0 208 333 109 13 chr10 117206663 117206819 -28382469 + MIR SINE MIR 79 249 -13 293 186 14 0 chr10 117207610 117207680 -28381608 + (CA)n Simple_repeat Simple_repeat 1 71 0 29 0 0 0 chr10 117207873 117207902 -28381386 + AT_rich Low_complexity Low_complexity 1 29 0 221 339 41 94 chr10 117207967 117208060 -28381228 + L2 LINE L2 2893 2974 -339 1901 127 9 43 chr10 117208060 117208383 -28380905 + AluSx SINE Alu 1 312 0 221 339 41 94 chr10 117208383 117208460 -28380828 + L2 LINE L2 2974 3054 -259 469 263 53 15 chr10 117208495 117208628 -28380660 + L2 LINE L2 3172 3309 -4 315 324 115 0 chr10 117208980 117209128 -28380160 + MIR SINE MIR 98 262 0 212 275 0 0 chr10 117209410 117209450 -28379838 - MER91A DNA MER1_type -19 177 138 28 0 0 0 chr10 117210428 117210456 -28378832 + AT_rich Low_complexity Low_complexity 1 28 0 302 314 41 78 chr10 117210645 117210890 -28378398 + MLT1J2 LTR MaLR 189 424 -26 370 254 27 135 chr10 117211048 117211233 -28378055 - MER5B DNA MER1_type -8 170 6 3574 110 15 2 chr10 117211524 117212060 -28377228 + L1PA13 LINE L1 5620 6162 -1 1802 74 0 0 chr10 117212567 117212783 -28376505 - AluSc SINE Alu -10 299 84 678 239 179 14 chr10 117212817 117213114 -28376174 + HAL1b LINE L1 256 601 -747 249 243 182 11 chr10 117213527 117213708 -28375580 + HAL1b LINE L1 1070 1281 -67 447 302 99 71 chr10 117213874 117214367 -28374921 - L1ME4a LINE L1 -87 6034 5528 341 316 58 49 chr10 117214867 117215092 -28374196 - Charlie8 DNA MER1_type -2140 277 51 295 250 94 21 chr10 117215967 117216063 -28373225 - MIR SINE MIR -64 144 42 621 345 70 33 chr10 117216186 117216583 -28372705 - LTR16C LTR ERVL -7 484 73 546 323 34 26 chr10 117216781 117217199 -28372089 - ERVL LTR ERVL -441 5323 4903 1204 81 0 25 chr10 117217206 117217367 -28371921 - AluSc SINE Alu -10 299 143 1088 287 105 8 chr10 117217850 117218553 -28370735 - L1ME3 LINE L1 -37 6125 5355 213 219 0 0 chr10 117218804 117218845 -28370443 + CT-rich Low_complexity Low_complexity 1 41 0 382 260 39 66 chr10 117218847 117219028 -28370260 - L1ME3 LINE L1 -2885 3261 3086 311 164 194 0 chr10 117219178 117219245 -28370043 + L2 LINE L2 3193 3272 0 911 112 0 30 chr10 117219572 117219706 -28369582 - AluJo SINE Alu -174 138 9 2156 94 0 24 chr10 117219795 117220118 -28369170 + AluSg SINE Alu 1 316 0 12474 66 3 0 chr10 117220212 117222449 -28366839 + L1PA6 LINE L1 3705 5948 -206 513 289 61 11 chr10 117222712 117222892 -28366396 + MIR SINE MIR 66 254 -8 1807 190 21 21 chr10 117222934 117223308 -28365980 - MLT1A2 LTR MaLR 0 374 1 320 274 81 0 chr10 117223739 117223863 -28365425 + LTR33 LTR ERVL 326 459 -62 2063 141 0 3 chr10 117223881 117224187 -28365101 + AluSx SINE Alu 1 305 -7 449 273 5 143 chr10 117224863 117225072 -28364216 + MER91A DNA MER1_type 17 196 0 188 219 16 78 chr10 117225767 117225831 -28363457 + MIR SINE MIR 19 78 -130 2198 103 3 13 chr10 117225851 117226153 -28363135 - AluSg SINE Alu -11 299 1 1945 134 10 10 chr10 117226238 117226558 -28362730 - AluSq SINE Alu 0 313 1 364 232 82 67 chr10 117227441 117227690 -28361598 + L1ME4a LINE L1 5221 5480 -743 446 276 124 24 chr10 117227700 117227990 -28361298 + L1ME4a LINE L1 5562 5880 -241 24 0 0 0 chr10 117229475 117229499 -28359789 + AT_rich Low_complexity Low_complexity 1 24 0 2425 62 0 0 chr10 117229505 117229794 -28359494 + AluY SINE Alu 1 289 -22 26 0 0 0 chr10 117230269 117230295 -28358993 + AT_rich Low_complexity Low_complexity 1 26 0 2101 123 13 0 chr10 117230602 117230903 -28358385 + AluSx SINE Alu 1 305 -7 334 245 112 0 chr10 117230963 117231061 -28358227 + MIR SINE MIR 119 227 -35 693 461 96 15 chr10 117232001 117232272 -28357016 + AluSx SINE Alu 1 293 -9 226 132 0 26 chr10 117233553 117233591 -28355697 + MIR SINE MIR 115 151 -57 429 171 197 88 chr10 117234387 117234615 -28354673 - MER112 DNA MER1_type -7 253 1 1174 212 0 0 chr10 117235538 117235760 -28353528 - AluJo SINE Alu -90 222 1 2331 117 0 0 chr10 117236658 117236967 -28352321 + AluSx SINE Alu 1 309 -3 194 61 0 30 chr10 117236981 117237014 -28352274 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 187 222 256 22 chr10 117237145 117237235 -28352053 + L3b LINE CR1 1219 1329 -254 1501 191 13 27 chr10 117237897 117238196 -28351092 + AluJb SINE Alu 1 295 -17 631 291 120 43 chr10 117238999 117239531 -28349757 + L1MEc LINE L1 786 1314 -4901 237 237 136 17 chr10 117239576 117239694 -28349594 + L1MEc LINE L1 1299 1430 -4785 1279 245 57 28 chr10 117239741 117240235 -28349053 + L1M4 LINE L1 4324 4831 -1315 5823 132 13 3 chr10 117240267 117241141 -28348147 - Tigger1 DNA MER2_type 0 2418 1537 346 231 0 0 chr10 117241145 117241223 -28348065 - Tigger1 DNA MER2_type -178 2240 2163 750 122 23 23 chr10 117241223 117241354 -28347934 - Tigger1 DNA MER2_type -889 1529 1399 24 0 0 0 chr10 117241563 117241587 -28347701 + GC_rich Low_complexity Low_complexity 1 24 0 271 298 221 0 chr10 117242553 117242711 -28346577 - MIR SINE MIR -22 240 48 353 250 9 45 chr10 117243239 117243351 -28345937 + L1MC5 LINE L1 7676 7783 -178 678 170 105 29 chr10 117243453 117243624 -28345664 - MLT1E LTR MaLR 0 593 410 737 233 14 46 chr10 117243732 117243793 -28345495 + LTR16C LTR ERVL 244 305 -186 3611 117 19 26 chr10 117243793 117244324 -28344964 + MER1A DNA MER1_type 1 527 0 737 233 14 46 chr10 117244324 117244481 -28344807 + LTR16C LTR ERVL 305 455 -36 670 283 25 25 chr10 117244731 117244929 -28344359 + MIR SINE MIR 33 230 -32 2483 168 13 0 chr10 117245110 117245508 -28343780 - MER57A LTR ERV1 0 403 1 246 279 29 39 chr10 117245825 117245929 -28343359 + L2 LINE L2 2852 2954 -360 335 202 147 96 chr10 117245972 117246170 -28343118 + L2 LINE L2 3106 3313 0 1261 208 4 29 chr10 117246202 117246447 -28342841 + MER8 DNA MER2_type 1 239 0 460 308 110 11 chr10 117246764 117247037 -28342251 + MLT1E LTR MaLR 1 300 -293 2243 91 19 19 chr10 117248163 117248470 -28340818 - AluY SINE Alu -4 307 1 380 227 80 0 chr10 117248486 117248574 -28340714 - MIR SINE MIR -121 141 47 197 291 102 39 chr10 117248624 117248751 -28340537 - L2 LINE L2 0 3272 3138 920 127 0 0 chr10 117249640 117249766 -28339522 - FLAM_C SINE Alu -17 126 1 1545 208 28 11 chr10 117249782 117250066 -28339222 - AluJb SINE Alu -11 291 3 282 293 191 9 chr10 117250350 117250488 -28338800 - MIR SINE MIR -58 150 14 458 273 146 12 chr10 117250488 117250653 -28338635 + MIR SINE MIR 3 189 -73 239 118 0 0 chr10 117250720 117250754 -28338534 + MIR SINE MIR 217 250 -12 974 92 0 0 chr10 117250909 117251028 -28338260 + FLAM_C SINE Alu 1 119 -14 31 26 0 0 chr10 117251029 117251067 -28338221 + AT_rich Low_complexity Low_complexity 1 38 0 243 244 0 0 chr10 117251849 117251894 -28337394 + polypyrimidine Low_complexity Low_complexity 3 47 0 491 202 44 53 chr10 117252402 117252516 -28336772 + L2 LINE L2 3196 3308 -5 953 225 81 51 chr10 117253844 117254177 -28335111 - L1MC4 LINE L1 -1 8041 7699 534 285 47 12 chr10 117254170 117254423 -28334865 - L1MEc LINE L1 -4153 2969 2708 * 2181 97 7 3 chr10 117254555 117254845 -28334443 + AluSc SINE Alu 6 296 -13 1993 203 75 29 chr10 117256292 117256771 -28332517 - MLT1D LTR MaLR -4 501 1 369 241 123 45 chr10 117259259 117259479 -28329809 - L1MEc LINE L1 -6149 274 38 262 274 66 9 chr10 117259494 117259600 -28329688 - L1ME LINE L1 -292 5874 5763 279 0 0 0 chr10 117260272 117260303 -28328985 + (TG)n Simple_repeat Simple_repeat 2 32 0 2232 94 3 19 chr10 117260500 117260807 -28328481 - AluSp SINE Alu -11 302 1 960 285 76 66 chr10 117261905 117262421 -28326867 + MLT1G1 LTR MaLR 73 593 -2 1119 194 0 24 chr10 117262786 117262997 -28326291 - AluJo SINE Alu -7 305 100 2416 64 0 0 chr10 117263137 117263434 -28325854 + AluY SINE Alu 12 308 -3 783 241 82 29 chr10 117263731 117263976 -28325312 - L1MC4 LINE L1 -303 7739 7482 1372 185 4 16 chr10 117264789 117265038 -28324250 - AluJo SINE Alu -25 287 42 823 229 27 0 chr10 117265713 117265896 -28323392 - L1MC4 LINE L1 -556 7486 7299 1112 131 0 44 chr10 117265910 117266093 -28323195 + AluJb SINE Alu 1 175 -137 2199 184 174 38 chr10 117266743 117267071 -28322217 + Charlie1a DNA MER1_type 1 283 -2478 2551 55 3 3 chr10 117267071 117267380 -28321908 + AluY SINE Alu 1 309 -2 2199 184 174 38 chr10 117267380 117267633 -28321655 + Charlie1a DNA MER1_type 283 661 -794 2083 112 0 0 chr10 117267635 117267911 -28321377 + AluSx SINE Alu 28 303 -9 944 166 141 4 chr10 117267917 117268158 -28321130 + Charlie1a DNA MER1_type 1182 1455 0 452 200 136 32 chr10 117268370 117268525 -28320763 - MIR SINE MIR -1 261 91 1446 219 40 0 chr10 117269854 117270151 -28319137 + AluJb SINE Alu 1 309 -3 25 0 0 0 chr10 117270245 117270270 -28319018 + AT_rich Low_complexity Low_complexity 1 25 0 1054 249 106 25 chr10 117270448 117270846 -28318442 - L2 LINE L2 -707 2607 2178 2049 107 0 83 chr10 117271409 117271736 -28317552 + AluSx SINE Alu 1 300 -12 1818 167 0 3 chr10 117271798 117272092 -28317196 + AluJo SINE Alu 1 293 -19 367 264 69 73 chr10 117272351 117272610 -28316678 - L1MC4a LINE L1 -348 5822 5668 254 167 21 0 chr10 117272635 117272683 -28316605 - L1MC4a LINE L1 -799 5534 5486 764 119 9 0 chr10 117272742 117272851 -28316437 - MLT1A2 LTR MaLR 0 374 265 308 331 41 0 chr10 117272898 117273019 -28316269 + L1MDa LINE L1 2343 2468 -4072 816 255 31 15 chr10 117273098 117273357 -28315931 + L1MDa LINE L1 2504 2766 -3774 1509 174 16 49 chr10 117273389 117273694 -28315594 + AluJo SINE Alu 1 295 -17 2660 255 103 46 chr10 117273936 117274481 -28314807 + L1M4 LINE L1 3609 4121 -2025 1570 189 3 18 chr10 117274481 117274813 -28314475 + AluJb SINE Alu 1 328 0 2660 255 103 46 chr10 117274813 117275167 -28314121 + L1M4 LINE L1 4121 4453 -1693 2547 62 0 0 chr10 117275167 117275475 -28313813 + AluY SINE Alu 2 309 -2 2660 255 103 46 chr10 117275475 117276127 -28313161 + L1M4 LINE L1 4453 5275 -871 709 164 44 25 chr10 117276144 117276303 -28312985 - L1MA4A LINE L1 -14 6289 6128 1925 199 34 23 chr10 117276303 117276781 -28312507 - L1 LINE L1 -2994 3152 2670 * 2618 242 4 11 chr10 117276780 117277337 -28311951 + L1M2 LINE L1 911 1463 -5386 2189 133 70 17 chr10 117277694 117278039 -28311249 - THE1B LTR MaLR -1 363 1 1641 236 73 14 chr10 117279415 117279856 -28309432 - MLT1C LTR MaLR 0 467 1 604 305 42 39 chr10 117280551 117280836 -28308452 + LTR16A1 LTR ERVL 172 457 0 1368 179 32 71 chr10 117280837 117281145 -28308143 - AluJb SINE Alu -16 296 1 915 340 70 19 chr10 117281163 117281752 -28307536 + ERVL LTR ERVL 37 655 -4341 977 353 63 41 chr10 117281988 117282793 -28306495 + ERVL LTR ERVL 968 1790 -3206 986 273 29 10 chr10 117283005 117283347 -28305941 + MLT2D LTR ERVL 19 464 0 1395 350 76 40 chr10 117283604 117283955 -28305333 + ERVL LTR ERVL 2090 2427 -3337 432 0 0 0 chr10 117283955 117284003 -28305285 + (TAGA)n Simple_repeat Simple_repeat 2 49 0 1395 350 76 40 chr10 117284003 117284375 -28304913 + ERVL LTR ERVL 2427 2784 -2980 620 207 0 79 chr10 117284375 117284515 -28304773 - FLAM_A SINE Alu -4 129 1 1395 350 76 40 chr10 117284515 117285005 -28304283 + ERVL LTR ERVL 2784 3255 -2509 1963 152 55 22 chr10 117285005 117285367 -28303921 + THE1C LTR MaLR 1 374 -1 1395 350 76 40 chr10 117285367 117286012 -28303276 + ERVL LTR ERVL 3255 4061 -1703 2061 178 24 11 chr10 117286250 117286626 -28302662 - MER66B LTR ERV1 0 486 106 397 333 16 8 chr10 117287889 117288015 -28301273 + MIR SINE MIR 9 135 -127 1943 181 49 22 chr10 117288015 117288380 -28300908 - MLT2B3 LTR ERVL -177 377 3 2260 105 3 7 chr10 117288547 117288842 -28300446 + AluSx SINE Alu 1 294 -18 497 331 79 45 chr10 117289393 117289910 -28299378 + L1MB3 LINE L1 4456 4990 -1156 497 204 104 86 chr10 117290122 117290343 -28298945 + L1MC4a LINE L1 5255 5479 -2329 739 285 165 21 chr10 117290351 117290782 -28298506 + L1MC4a LINE L1 5562 6054 -1754 4096 170 29 41 chr10 117291022 117292437 -28296851 - L1PA16 LINE L1 0 6166 4770 2238 75 33 26 chr10 117292437 117292742 -28296546 - AluY SINE Alu -2 309 3 4096 170 29 41 chr10 117292742 117293199 -28296089 - L1PA16 LINE L1 -1396 4770 4309 252 143 0 0 chr10 117293199 117293234 -28296054 + 5S rRNA rRNA 1 35 -86 875 108 36 0 chr10 117293240 117293379 -28295909 - L1PA13 LINE L1 -2 6161 6018 2541 215 64 3 chr10 117293977 117294615 -28294673 - L1 LINE L1 -1594 4552 3876 4455 171 29 35 chr10 117294631 117295191 -28294097 + L1MB3 LINE L1 5190 5751 -432 197 32 0 32 chr10 117295191 117295222 -28294066 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 2170 34 49 0 chr10 117295224 117295489 -28293799 - AluY SINE Alu -33 278 1 4455 171 29 35 chr10 117295489 117295928 -28293360 + L1MB3 LINE L1 5752 6183 0 231 319 31 61 chr10 117297798 117297961 -28291327 - MLT1L LTR MaLR -252 363 206 1211 278 56 48 chr10 117298021 117298891 -28290397 + L1MEc LINE L1 761 1637 -4759 31 36 0 18 chr10 117299118 117299155 -28290133 + AT_rich Low_complexity Low_complexity 1 38 -17 2015 125 14 7 chr10 117299155 117299442 -28289846 - AluSp SINE Alu -24 289 1 31 36 0 18 chr10 117299442 117299460 -28289828 + AT_rich Low_complexity Low_complexity 38 55 0 5489 177 25 64 chr10 117299463 117300439 -28288849 - L1MA4 LINE L1 -27 7692 6680 847 29 0 0 chr10 117300439 117300542 -28288746 - L1PA2 LINE L1 -3 6152 6050 5489 177 25 64 chr10 117300542 117300565 -28288723 - L1MA4 LINE L1 -1039 6680 6658 2302 103 0 0 chr10 117300565 117300865 -28288423 - AluSx SINE Alu -7 305 6 5489 177 25 64 chr10 117300865 117303307 -28285981 - L1MA4 LINE L1 -1061 6658 4114 * 9886 177 70 24 chr10 117303275 117305260 -28284028 - L1MA4 LINE L1 -5470 2095 20 1610 270 73 25 chr10 117305267 117306324 -28282964 + L1ME3A LINE L1 4895 6006 -164 2404 195 13 19 chr10 117306538 117307009 -28282279 + L1MC3 LINE L1 7035 7502 -283 1147 213 24 8 chr10 117307009 117307262 -28282026 + L1PB4 LINE L1 5882 6138 -18 839 180 21 95 chr10 117307381 117307522 -28281766 + L1MC3 LINE L1 7521 7632 -153 2295 87 3 6 chr10 117307522 117307834 -28281454 + AluY SINE Alu 1 311 0 839 180 21 95 chr10 117307834 117307976 -28281312 + L1MC3 LINE L1 7632 7783 -2 374 310 19 19 chr10 117308050 117308266 -28281022 - L1M4 LINE L1 -1814 4332 4117 * 457 312 28 25 chr10 117308264 117308617 -28280671 - L1M4 LINE L1 -2443 3703 3350 26 50 0 0 chr10 117308619 117308659 -28280629 + AT_rich Low_complexity Low_complexity 1 40 0 22 0 0 0 chr10 117309039 117309061 -28280227 + AT_rich Low_complexity Low_complexity 1 22 0 471 236 100 13 chr10 117309097 117309398 -28279890 + L1ME1 LINE L1 2141 2467 -3679 1491 253 29 60 chr10 117309424 117309466 -28279822 + L1ME1 LINE L1 5156 5198 -968 1843 112 40 22 chr10 117309466 117309744 -28279544 + AluSq SINE Alu 1 283 -30 294 29 0 0 chr10 117309744 117309779 -28279509 + (TGAA)n Simple_repeat Simple_repeat 3 37 0 1491 253 29 60 chr10 117309779 117310551 -28278737 + L1ME1 LINE L1 5196 5942 -224 320 292 81 24 chr10 117310588 117310797 -28278491 + L1 LINE L1 4045 4265 -1881 4840 53 0 5 chr10 117310843 117311462 -28277826 - L1PA3 LINE L1 0 6155 5540 804 204 78 0 chr10 117311566 117311748 -28277540 - L1 LINE L1 -1695 4451 4246 249 33 0 0 chr10 117311748 117311778 -28277510 + (TG)n Simple_repeat Simple_repeat 1 30 0 804 204 78 0 chr10 117311778 117311825 -28277463 - L1 LINE L1 -1900 4246 4204 1396 321 50 14 chr10 117311844 117312545 -28276743 + ERVL LTR ERVL 1881 2585 -3069 989 319 9 33 chr10 117312744 117313073 -28276215 - MLT2E LTR ERVL -307 321 1 324 336 58 0 chr10 117313093 117313319 -28275969 - L1 LINE L1 -3568 2578 2340 781 252 128 50 chr10 117313349 117313670 -28275618 + MLT2E LTR ERVL 283 628 0 309 51 0 0 chr10 117313716 117313755 -28275533 + (TG)n Simple_repeat Simple_repeat 2 40 0 892 292 98 9 chr10 117313897 117314531 -28274757 + L1ME3A LINE L1 3887 4576 -1570 1887 151 12 0 chr10 117314557 117314881 -28274407 - L1MA4 LINE L1 -127 6173 5846 608 178 0 8 chr10 117314881 117315008 -28274280 + L1MA4 LINE L1 6172 6299 -1 307 308 74 26 chr10 117315048 117315617 -28273671 + L1ME3A LINE L1 4632 5272 -874 210 191 0 0 chr10 117315628 117315670 -28273618 + (CA)n Simple_repeat Simple_repeat 2 43 0 1451 284 88 43 chr10 117315698 117316531 -28272757 + L1ME3A LINE L1 5266 6135 -35 405 314 57 19 chr10 117317355 117317514 -28271774 + MIR3 SINE MIR 34 198 -10 249 256 72 80 chr10 117318020 117318145 -28271143 - MER103 DNA DNA 0 166 43 2153 130 47 8 chr10 117318271 117318632 -28270656 + THE1C LTR MaLR 1 375 0 309 250 38 0 chr10 117318738 117318818 -28270470 + MIR SINE MIR 51 133 -129 21 0 0 0 chr10 117318835 117318856 -28270432 + AT_rich Low_complexity Low_complexity 1 21 0 2029 196 167 9 chr10 117320198 117320647 -28268641 - MLT2B1 LTR ERVL 0 520 1 27698 182 27 6 chr10 117320647 117325575 -28263713 - ERVL-B1 LTR ERVL -7 5757 727 1756 204 31 5 chr10 117325681 117326069 -28263219 - MLT2B1 LTR ERVL -72 443 1 859 298 63 47 chr10 117326394 117326843 -28262445 + LTR16A LTR ERVL 8 457 0 389 247 0 0 chr10 117326862 117326947 -28262341 - L1ME LINE L1 -351 5815 5731 412 371 38 8 chr10 117328688 117328928 -28260360 + MIR SINE MIR 4 250 -12 22 0 0 0 chr10 117328955 117328977 -28260311 + AT_rich Low_complexity Low_complexity 1 22 0 2135 99 10 10 chr10 117329030 117329323 -28259965 - AluSx SINE Alu -19 293 1 308 331 79 6 chr10 117330272 117330450 -28258838 + MIR SINE MIR 17 207 -55 258 303 13 13 chr10 117330489 117330565 -28258723 + L2 LINE L2 2709 2784 -530 229 325 138 32 chr10 117330877 117331000 -28258288 - L2 LINE L2 0 3272 3137 310 114 0 0 chr10 117331332 117331376 -28257912 - MER5A DNA MER1_type -144 45 2 238 250 15 0 chr10 117331963 117332031 -28257257 + (CA)n Simple_repeat Simple_repeat 1 69 0 54 29 0 0 chr10 117332339 117332407 -28256881 + AT_rich Low_complexity Low_complexity 1 68 0 296 384 13 0 chr10 117332852 117333003 -28256285 + L2 LINE L2 2560 2712 -602 215 382 65 56 chr10 117333227 117333567 -28255721 + L2 LINE L2 2910 3252 -20 659 327 88 70 chr10 117333768 117334279 -28255009 + LTR67 LTR ERVL 32 551 -6 445 277 171 58 chr10 117334592 117334920 -28254368 - L3 LINE CR1 -7 1570 1206 383 257 38 44 chr10 117334944 117335127 -28254161 + L1MCc LINE L1 20 201 -6222 398 251 58 99 chr10 117335525 117335973 -28253315 + L1MCc LINE L1 1260 1894 -4889 183 42 0 0 chr10 117335973 117335997 -28253291 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 341 331 87 14 chr10 117336200 117336475 -28252813 + L1MCc LINE L1 2171 2465 -4657 651 189 16 0 chr10 117336639 117336761 -28252527 - L1M3 LINE L1 -802 5532 5409 825 125 7 14 chr10 117336762 117336906 -28252382 + L1M3 LINE L1 5528 5670 -498 676 168 0 0 chr10 117336923 117337048 -28252240 - L1MA10 LINE L1 -11 6323 6199 361 273 18 18 chr10 117337225 117337335 -28251953 - L2 LINE L2 -22 3291 3182 341 278 220 16 chr10 117337351 117337569 -28251719 + MIR SINE MIR 3 262 0 254 299 0 39 chr10 117337780 117337857 -28251431 + MIR SINE MIR 119 192 -70 212 133 0 44 chr10 117337993 117338038 -28251250 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 593 348 30 4 chr10 117338206 117338439 -28250849 + MIR SINE MIR 11 249 -13 706 147 0 8 chr10 117338773 117338902 -28250386 + L1MA10 LINE L1 6196 6323 -11 284 175 0 32 chr10 117338919 117338982 -28250306 - L1M3 LINE L1 -498 5670 5610 21 0 0 0 chr10 117338998 117339019 -28250269 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 117340416 117340437 -28248851 + AT_rich Low_complexity Low_complexity 1 21 0 243 342 61 35 chr10 117341216 117341330 -28247958 - L2 LINE L2 -20 3252 3136 241 312 64 32 chr10 117342034 117342159 -28247129 - MIR3 SINE MIR -25 183 55 2602 61 0 0 chr10 117342384 117342695 -28246593 + AluY SINE Alu 1 311 0 413 315 77 0 chr10 117342716 117342897 -28246391 - MIR SINE MIR 0 262 68 1095 219 38 20 chr10 117343731 117344078 -28245210 + L1MCc LINE L1 2929 3281 -3660 5284 125 27 3 chr10 117344255 117345134 -28244154 - L1PA15 LINE L1 -4 6161 5262 1441 223 73 0 chr10 117345160 117345542 -28243746 - L1P LINE L1 -825 5321 4912 312 174 157 8 chr10 117345541 117345662 -28243626 + L1ME LINE L1 5700 5838 -328 * 499 276 61 89 chr10 117345677 117346036 -28243252 - L1MEc LINE L1 -5554 842 494 332 312 48 42 chr10 117346202 117346391 -28242897 - L1MEc LINE L1 -6100 296 107 516 247 55 7 chr10 117346421 117346567 -28242721 + L1M4b LINE L1 2 154 -6705 6196 130 20 3 chr10 117346571 117347754 -28241534 - L1MA2 LINE L1 0 6304 5101 3331 260 44 36 chr10 117347753 117348832 -28240456 + L1M4b LINE L1 142 1228 -5631 * 206 318 34 0 chr10 117348891 117348979 -28240309 + MIR SINE MIR 166 256 -6 482 160 127 47 chr10 117350005 117350155 -28239133 - LTR16C LTR ERVL 0 491 330 223 250 12 0 chr10 117350223 117350307 -28238981 + (TA)n Simple_repeat Simple_repeat 1 85 0 219 275 29 0 chr10 117350385 117350454 -28238834 - MIR SINE MIR -109 153 83 3381 171 27 5 chr10 117350545 117351219 -28238069 + L1MB2 LINE L1 5447 6135 -36 228 209 48 114 chr10 117351331 117351436 -28237852 - L3 LINE CR1 -16 1561 1464 208 286 0 0 chr10 117352694 117352743 -28236545 + MIR SINE MIR 85 133 -129 635 305 41 12 chr10 117352834 117353080 -28236208 + MIR SINE MIR 2 254 -8 849 215 27 0 chr10 117353131 117353417 -28235871 + L1ME1 LINE L1 5765 6145 -21 643 175 14 35 chr10 117353719 117353862 -28235426 + L1MA10 LINE L1 6184 6323 -11 457 343 77 5 chr10 117354984 117355191 -28234097 + MIR SINE MIR 1 222 -40 371 333 77 54 chr10 117355186 117355871 -28233417 + L2 LINE L2 1878 2578 -736 * 1858 154 49 35 chr10 117356211 117356581 -28232707 + THE1C LTR MaLR 1 375 0 2309 111 0 0 chr10 117357113 117357411 -28231877 - AluSc SINE Alu -11 298 1 24 0 0 0 chr10 117357412 117357436 -28231852 + AT_rich Low_complexity Low_complexity 1 24 0 440 181 110 8 chr10 117357530 117357657 -28231631 - L1MD3 LINE L1 0 7995 7856 233 261 80 23 chr10 117358384 117358472 -28230816 - L2 LINE L2 -13 3259 3167 247 234 62 0 chr10 117358638 117358702 -28230586 - MIR SINE MIR -10 252 185 455 280 89 67 chr10 117359034 117359259 -28230029 - MIR SINE MIR -13 249 20 259 394 41 12 chr10 117360370 117360540 -28228748 - L2 LINE L2 -582 2732 2558 2078 142 72 13 chr10 117360544 117360918 -28228370 - MER61B LTR ERV1 -29 396 1 21 0 0 0 chr10 117361254 117361275 -28228013 + AT_rich Low_complexity Low_complexity 1 21 0 2026 181 34 63 chr10 117361558 117362000 -28227288 - MSTB1 LTR MaLR 0 432 4 292 318 65 7 chr10 117362808 117362962 -28226326 + Charlie8 DNA MER1_type 118 280 -2137 750 273 251 32 chr10 117363324 117363976 -28225312 - LTR50 LTR ERVL 0 795 1 255 288 98 76 chr10 117364104 117364288 -28225000 - MIR SINE MIR -62 200 13 560 288 0 7 chr10 117364713 117364859 -28224429 - MER91B DNA MER1_type -42 148 4 316 353 53 12 chr10 117365600 117365770 -28223518 + L3 LINE CR1 1400 1576 -1 30 27 0 0 chr10 117365950 117365987 -28223301 + AT_rich Low_complexity Low_complexity 1 37 0 255 344 62 0 chr10 117366444 117366540 -28222748 - L2 LINE L2 0 3272 3171 371 248 43 60 chr10 117366647 117366764 -28222524 + MLT1H LTR MaLR 58 172 -377 541 191 54 48 chr10 117366842 117367010 -28222278 + L1ME3 LINE L1 5950 6118 -44 225 256 0 0 chr10 117367040 117367083 -28222205 + (CA)n Simple_repeat Simple_repeat 2 44 0 665 346 49 27 chr10 117367122 117367529 -28221759 - L2 LINE L2 -1302 2012 1597 24 0 0 0 chr10 117367533 117367557 -28221731 + AT_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr10 117367589 117367618 -28221670 + AT_rich Low_complexity Low_complexity 1 29 0 374 235 61 0 chr10 117367913 117368011 -28221277 - MLT1H LTR MaLR -387 162 59 254 327 59 20 chr10 117368123 117368224 -28221064 + L2 LINE L2 3168 3272 0 228 306 108 19 chr10 117368306 117368463 -28220825 - L2 LINE L2 -1539 1775 1605 368 265 76 68 chr10 117369186 117369318 -28219970 - MIR3 SINE MIR -10 198 66 952 280 117 40 chr10 117369555 117370077 -28219211 + MER68 LTR ERV1 1 562 0 1054 307 78 35 chr10 117370250 117370408 -28218880 + L2 LINE L2 2305 2455 -858 672 192 64 0 chr10 117370408 117370533 -28218755 + FLAM_A SINE Alu 1 133 0 1054 307 78 35 chr10 117370533 117371345 -28217943 + L2 LINE L2 2455 3313 0 191 36 36 0 chr10 117371833 117371861 -28217427 + (TTTC)n Simple_repeat Simple_repeat 2 30 0 243 323 53 68 chr10 117372542 117372675 -28216613 + MIR SINE MIR 2 132 -130 460 216 48 36 chr10 117372886 117373053 -28216235 - MER33 DNA MER1_type -102 222 54 332 240 143 17 chr10 117373183 117373358 -28215930 - L1MA6 LINE L1 -139 6161 5965 180 401 40 6 chr10 117373573 117373750 -28215538 - L2 LINE L2 -223 3049 2867 408 306 15 0 chr10 117374415 117374549 -28214739 - MIR SINE MIR -79 183 48 282 295 9 54 chr10 117374928 117375040 -28214248 + MIR SINE MIR 89 195 -67 732 125 0 17 chr10 117375140 117375287 -28214001 + AluY SINE Alu 179 311 0 359 263 61 9 chr10 117375313 117375427 -28213861 + MIR SINE MIR 68 187 -75 264 368 24 29 chr10 117376176 117376385 -28212903 + MIR SINE MIR 55 262 0 201 297 166 35 chr10 117376905 117377050 -28212238 + L2 LINE L2 2185 2348 -966 438 238 47 64 chr10 117377308 117377543 -28211745 + LTR40b LTR ERVL 152 382 -80 535 349 13 13 chr10 117377809 117378038 -28211250 + MIR SINE MIR 34 262 0 24 32 0 0 chr10 117378404 117378435 -28210853 + AT_rich Low_complexity Low_complexity 1 31 0 470 260 8 0 chr10 117378770 117378893 -28210395 - MER94 DNA DNA -10 124 1 2256 89 31 10 chr10 117379211 117379504 -28209784 - AluY SINE Alu -12 299 1 481 314 81 0 chr10 117379531 117379703 -28209585 - MLT1K LTR MaLR -91 497 312 444 331 100 26 chr10 117380164 117380433 -28208855 - MLT1J2 LTR MaLR -117 333 45 241 153 17 17 chr10 117381077 117381136 -28208152 + GA-rich Low_complexity Low_complexity 2 60 0 4502 101 0 18 chr10 117382125 117382836 -28206452 - THE1-int LTR MaLR -65 1515 818 2342 108 129 5 chr10 117383464 117383845 -28205443 - MSTA LTR MaLR 0 428 1 959 135 0 20 chr10 117383878 117384026 -28205262 + AluJo SINE Alu 6 150 -162 898 226 20 0 chr10 117384598 117384793 -28204495 - AluJo SINE Alu -92 220 22 339 271 14 29 chr10 117385059 117385249 -28204039 + CT-rich Low_complexity Low_complexity 1 187 0 366 299 0 43 chr10 117385316 117385514 -28203774 + CT-rich Low_complexity Low_complexity 1 189 0 224 59 29 0 chr10 117385518 117385552 -28203736 + (TC)n Simple_repeat Simple_repeat 1 35 0 277 293 16 16 chr10 117385552 117385675 -28203613 + (CCTCG)n Simple_repeat Simple_repeat 4 126 0 2005 105 41 27 chr10 117386035 117386330 -28202958 + AluSx SINE Alu 1 299 -13 25 0 0 0 chr10 117386868 117386893 -28202395 + GC_rich Low_complexity Low_complexity 1 25 0 254 182 0 0 chr10 117387031 117387075 -28202213 + MER63 DNA MER1_type 737 780 -281 241 191 71 0 chr10 117387108 117387192 -28202096 + MER63 DNA MER1_type 867 956 -106 974 121 13 25 chr10 117387192 117387349 -28201939 - AluSg/x SINE Alu -18 294 140 2097 139 7 0 chr10 117388640 117388950 -28200338 - AluSx SINE Alu 0 312 1 236 274 18 9 chr10 117389310 117389423 -28199865 + T-rich Low_complexity Low_complexity 1 114 0 325 242 11 33 chr10 117389583 117389674 -28199614 - L1M4 LINE L1 -2856 3290 3202 1813 90 0 90 chr10 117389728 117390016 -28199272 + AluY SINE Alu 1 262 -49 682 152 15 23 chr10 117390017 117390149 -28199139 - FRAM SINE Alu -8 168 38 446 215 78 72 chr10 117390733 117391151 -28198137 - MLT1H LTR MaLR -2 547 72 201 154 0 0 chr10 117393055 117393094 -28196194 + C-rich Low_complexity Low_complexity 1 39 0 581 311 72 25 chr10 117395066 117395426 -28193862 - MLT1J2 LTR MaLR -52 398 22 405 206 0 0 chr10 117395940 117396042 -28193246 + G-rich Low_complexity Low_complexity 1 102 0 399 239 14 43 chr10 117396312 117396450 -28192838 - MER94 DNA DNA 0 134 1 2569 149 27 8 chr10 117397207 117397729 -28191559 - L1 LINE L1 -1394 4752 4221 1724 112 0 48 chr10 117397729 117398023 -28191265 + AluSg SINE Alu 1 280 -30 287 205 42 48 chr10 117398408 117398574 -28190714 + CT-rich Low_complexity Low_complexity 2 166 0 237 343 21 17 chr10 117398623 117398859 -28190429 + C-rich Low_complexity Low_complexity 1 236 0 449 129 108 165 chr10 117399603 117399806 -28189482 + L1MA7 LINE L1 5655 5840 -451 1677 133 8 0 chr10 117399976 117400232 -28189056 - Tigger3(Golem) DNA MER2_type 0 3038 2781 1194 167 120 8 chr10 117400269 117400527 -28188761 + MSTA LTR MaLR 1 287 -141 225 219 16 31 chr10 117401300 117401364 -28187924 - tRNA-Ile-ATT tRNA tRNA -3 74 12 226 183 50 0 chr10 117401713 117401773 -28187515 + C-rich Low_complexity Low_complexity 6 68 0 210 204 0 20 chr10 117403387 117403436 -28185852 + (TAAA)n Simple_repeat Simple_repeat 4 51 0 183 157 22 45 chr10 117404125 117404214 -28185074 + GA-rich Low_complexity Low_complexity 1 87 0 5986 98 11 2 chr10 117404361 117405233 -28184055 + THE1A-int LTR MaLR 701 1580 0 227 30 0 30 chr10 117405236 117405269 -28184019 + THE1A LTR MaLR 3 34 -321 2705 161 23 13 chr10 117405886 117406363 -28182925 + L1PA12 LINE L1 1 482 -7099 514 211 8 8 chr10 117406359 117406492 -28182796 + L1P LINE L1 2951 3083 -3063 * 575 296 45 17 chr10 117407098 117407277 -28182011 - MIR SINE MIR -72 190 7 1226 174 51 96 chr10 117407678 117408034 -28181254 - MER58B DNA MER1_type -1 340 1 2021 240 31 15 chr10 117409408 117410075 -28179213 + L1ME3A LINE L1 4565 5242 -904 706 79 0 0 chr10 117410804 117410893 -28178395 - AluY SINE Alu -222 89 1 216 198 25 86 chr10 117412501 117412582 -28176706 - MIR SINE MIR -1 261 186 230 329 0 0 chr10 117412590 117412660 -28176628 + MER91 DNA MER1_type 1 70 -70 1152 270 49 49 chr10 117416227 117416775 -28172513 + L1ME3A LINE L1 5614 6161 -9 1518 165 39 18 chr10 117417278 117417611 -28171677 - L1MA8 LINE L1 -64 6227 5888 186 43 0 0 chr10 117418346 117418369 -28170919 + (CATTT)n Simple_repeat Simple_repeat 3 25 0 1743 123 10 97 chr10 117418369 117418679 -28170609 - AluSx SINE Alu -29 283 1 383 141 172 0 chr10 117419280 117419379 -28169909 - L1MA8 LINE L1 -3 6288 6173 1481 182 21 14 chr10 117420766 117421057 -28168231 - L1M2 LINE L1 -6551 298 6 2061 125 10 0 chr10 117421823 117422119 -28167169 + AluSp SINE Alu 3 301 -12 306 211 8 62 chr10 117422938 117423066 -28166222 + FRAM SINE Alu 43 163 -3 184 365 53 50 chr10 117423089 117423412 -28165876 - L2 LINE L2 -850 2464 2141 5140 150 11 27 chr10 117423544 117424725 -28164563 - L1PA14 LINE L1 -11 6150 4996 1666 106 0 67 chr10 117424725 117425037 -28164251 - AluY SINE Alu -20 291 1 5140 150 11 27 chr10 117425037 117425171 -28164117 - L1PA14 LINE L1 -1165 4996 4861 6207 237 81 40 chr10 117425300 117427470 -28161818 - L1M2 LINE L1 -4309 2900 433 1207 221 90 26 chr10 117427636 117428291 -28160997 + L1MEc LINE L1 1715 2520 -4087 * 4806 215 72 19 chr10 117428273 117429623 -28159665 + L1MC3 LINE L1 5781 7201 -584 1635 69 17 17 chr10 117429624 117429855 -28159433 + AluY SINE Alu 1 231 -80 37 52 0 0 chr10 117429960 117430018 -28159270 + AT_rich Low_complexity Low_complexity 1 58 0 772 48 38 0 chr10 117430038 117430143 -28159145 - L1PA4 LINE L1 0 6155 6047 662 250 36 62 chr10 117430376 117430600 -28158688 + MER20 DNA MER1_type 1 218 -1 338 273 106 119 chr10 117431213 117431591 -28157697 - L2 LINE L2 -71 3242 2870 25 31 0 0 chr10 117431733 117431765 -28157523 + AT_rich Low_complexity Low_complexity 1 32 0 221 245 0 0 chr10 117432066 117432115 -28157173 + T-rich Low_complexity Low_complexity 3 51 0 25 0 0 0 chr10 117432145 117432170 -28157118 + AT_rich Low_complexity Low_complexity 1 25 0 285 239 42 0 chr10 117432525 117432596 -28156692 - MIR SINE MIR -70 192 119 348 228 50 8 chr10 117433334 117433466 -28155822 - MIR SINE MIR -60 202 65 2440 67 3 16 chr10 117433626 117433940 -28155348 - AluY SINE Alu 0 311 2 251 300 0 0 chr10 117434005 117434065 -28155223 + (TATG)n Simple_repeat Simple_repeat 3 62 0 575 255 113 24 chr10 117434409 117434621 -28154667 + MIR SINE MIR 32 262 0 23 97 0 0 chr10 117435399 117435471 -28153817 + AT_rich Low_complexity Low_complexity 1 72 0 229 273 0 40 chr10 117436568 117436667 -28152621 + GA-rich Low_complexity Low_complexity 5 99 0 934 258 30 11 chr10 117436728 117436999 -28152289 + L1PB3 LINE L1 826 1101 -5686 * 3748 184 15 45 chr10 117436998 117437390 -28151898 + L1PB3 LINE L1 3596 3998 -2799 2207 99 0 40 chr10 117437390 117437712 -28151576 + AluSc SINE Alu 1 309 0 3748 184 15 45 chr10 117437712 117438257 -28151031 + L1PB3 LINE L1 3998 4505 -2292 3303 186 12 15 chr10 117438285 117439461 -28149827 + L1PB3 LINE L1 5202 6372 -582 1238 153 0 14 chr10 117440961 117441170 -28148118 + L1PB3 LINE L1 6600 6805 0 3262 189 13 3 chr10 117441724 117442355 -28146933 - L1MB7 LINE L1 -16 6168 5532 872 129 13 7 chr10 117443573 117443728 -28145560 - LTR1 LTR ERV1 -629 156 1 451 331 0 0 chr10 117444326 117444498 -28144790 + L1ME LINE L1 5645 5816 -305 643 225 92 12 chr10 117445608 117445781 -28143507 + MIR SINE MIR 21 207 -55 234 269 0 0 chr10 117445814 117445866 -28143422 + (CAT)n Simple_repeat Simple_repeat 3 54 0 226 359 90 54 chr10 117446383 117446606 -28142682 + MIR SINE MIR 20 250 -12 581 126 0 10 chr10 117446805 117446908 -28142380 + (GGAA)n Simple_repeat Simple_repeat 2 103 0 333 323 44 31 chr10 117447415 117447644 -28141644 + L1ME LINE L1 5389 5620 -501 423 0 0 0 chr10 117447707 117447754 -28141534 + (CA)n Simple_repeat Simple_repeat 2 48 0 732 150 16 16 chr10 117448702 117448820 -28140468 - MER20 DNA MER1_type -2 217 100 517 222 6 62 chr10 117448820 117448982 -28140306 - LTR19C LTR ERV1 0 779 627 5148 157 13 15 chr10 117449160 117450539 -28138749 - L1PB3 LINE L1 -99 6055 4676 1390 256 60 37 chr10 117450570 117451186 -28138102 - L1MC4a LINE L1 -1922 5886 5257 238 309 99 0 chr10 117451345 117451426 -28137862 - MIR3 SINE MIR -35 173 85 328 225 31 23 chr10 117451426 117451555 -28137733 + (CATATA)n Simple_repeat Simple_repeat 2 131 0 186 263 70 18 chr10 117451569 117451626 -28137662 - L2 LINE L2 -61 3252 3193 543 149 70 158 chr10 117452726 117452954 -28136334 - L1MCa LINE L1 -5502 924 717 2599 166 149 6 chr10 117452954 117453174 -28136114 + MER6A DNA MER2_type 1 188 -677 290 98 20 0 chr10 117453174 117453225 -28136063 + (TG)n Simple_repeat Simple_repeat 2 53 0 2599 166 149 6 chr10 117453225 117453533 -28135755 + MER6A DNA MER2_type 188 605 0 3047 184 16 80 chr10 117453533 117454271 -28135017 - L1MCa LINE L1 -5708 718 28 545 274 79 32 chr10 117454302 117454891 -28134397 - L1ME LINE L1 -602 5562 4951 23 33 0 0 chr10 117454987 117455017 -28134271 + AT_rich Low_complexity Low_complexity 1 30 0 25 51 0 0 chr10 117455100 117455139 -28134149 + AT_rich Low_complexity Low_complexity 1 39 0 1230 278 64 23 chr10 117455319 117456096 -28133192 - L1ME LINE L1 -1297 4849 4041 213 39 0 0 chr10 117456768 117456794 -28132494 + (CA)n Simple_repeat Simple_repeat 1 26 0 299 382 118 0 chr10 117458651 117458761 -28130527 + L2 LINE L2 3134 3256 -16 1074 240 92 56 chr10 117458837 117460021 -28129267 + L1MC4 LINE L1 5908 7048 -760 270 0 0 0 chr10 117460021 117460051 -28129237 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 1074 240 92 56 chr10 117460051 117460429 -28128859 + L1MC4 LINE L1 7048 7389 -419 2067 119 3 0 chr10 117460429 117460747 -28128541 + AluSx SINE Alu 1 319 0 1074 240 92 56 chr10 117460747 117461084 -28128204 + L1MC4 LINE L1 7389 7713 -95 201 39 0 0 chr10 117461085 117461111 -28128177 + (TG)n Simple_repeat Simple_repeat 2 27 0 563 218 30 0 chr10 117461208 117461341 -28127947 + L1MC4 LINE L1 7904 8040 -2 184 342 26 0 chr10 117461403 117461479 -28127809 - MIR SINE MIR -87 121 44 23 0 0 0 chr10 117461792 117461815 -28127473 + AT_rich Low_complexity Low_complexity 1 23 0 702 239 55 13 chr10 117464495 117464733 -28124555 - L1MB8 LINE L1 0 6178 5931 934 226 82 41 chr10 117464733 117464976 -28124312 - MLT1H LTR MaLR -261 288 36 300 397 61 33 chr10 117465246 117465768 -28123520 + L2 LINE L2 2348 2884 -430 493 305 112 22 chr10 117465835 117466058 -28123230 + MIR SINE MIR 10 252 -10 201 350 0 17 chr10 117466261 117466321 -28122967 + L2 LINE L2 3125 3183 -89 1766 165 3 14 chr10 117466926 117467223 -28122065 + AluJb SINE Alu 1 294 -18 24 0 0 0 chr10 117467585 117467609 -28121679 + AT_rich Low_complexity Low_complexity 1 24 0 762 341 88 8 chr10 117468764 117469258 -28120030 + LTR50 LTR ERVL 340 794 -1 216 0 0 0 chr10 117469395 117469419 -28119869 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 1527 259 121 36 chr10 117470232 117471516 -28117772 + L1MCc LINE L1 1065 2481 -4460 618 135 0 0 chr10 117471622 117471711 -28117577 + 5S rRNA rRNA 2 90 -31 242 248 105 29 chr10 117471711 117471816 -28117472 + L1MCc LINE L1 2690 2802 -4320 267 238 82 7 chr10 117471836 117471983 -28117305 + L1M4 LINE L1 4366 4523 -1623 1568 236 33 25 chr10 117472001 117472400 -28116888 - MLT1E2 LTR MaLR -224 402 1 216 171 0 0 chr10 117472441 117472476 -28116812 + (CA)n Simple_repeat Simple_repeat 1 35 0 428 271 53 51 chr10 117472509 117472577 -28116711 + L1MEc LINE L1 1166 1232 -5194 2215 127 0 0 chr10 117472577 117472884 -28116404 + AluSx SINE Alu 1 307 -5 428 271 53 51 chr10 117472884 117473131 -28116157 + L1MEc LINE L1 1232 1415 -5011 286 270 72 13 chr10 117473384 117473536 -28115752 + L1MEc LINE L1 1779 1939 -4668 5689 58 5 26 chr10 117473598 117474376 -28114912 + L1P1 LINE L1 1 762 -5384 * 21776 26 0 4 chr10 117474373 117474448 -28114840 + L1P1 LINE L1 2767 2841 -3314 2884 10 0 0 chr10 117474448 117474762 -28114526 + AluYb8 SINE Alu 1 314 -4 21776 26 0 4 chr10 117474762 117477578 -28111710 + L1P1 LINE L1 2841 5646 -509 559 96 0 0 chr10 117477690 117477773 -28111515 + L1PA16 LINE L1 6084 6166 0 546 293 81 27 chr10 117477906 117478165 -28111123 + HAL1 LINE L1 1301 1573 -934 1782 186 0 7 chr10 117478296 117478602 -28110686 - AluJb SINE Alu -8 304 1 249 356 119 38 chr10 117479234 117479356 -28109932 + L3 LINE CR1 867 978 -599 2272 108 0 7 chr10 117479356 117479663 -28109625 - AluSg SINE Alu -5 305 1 249 356 119 38 chr10 117479663 117480093 -28109195 + L3 LINE CR1 978 1464 -113 296 288 209 0 chr10 117480344 117480507 -28108781 - MER117 DNA MER1_type 0 197 1 260 267 0 80 chr10 117480712 117480728 -28108560 - MER91 DNA MER1_type -2 138 122 1951 112 7 4 chr10 117480728 117481004 -28108284 - AluSx SINE Alu -8 304 28 260 267 0 80 chr10 117481004 117481062 -28108226 - MER91 DNA MER1_type -18 122 70 49 43 0 0 chr10 117481260 117481330 -28107958 + AT_rich Low_complexity Low_complexity 1 70 0 3224 14 0 0 chr10 117481330 117481698 -28107590 + L1PA2 LINE L1 5788 6155 0 409 261 75 21 chr10 117481732 117481919 -28107369 + L1M4 LINE L1 3971 4167 -1979 21 0 0 0 chr10 117481919 117481940 -28107348 + AT_rich Low_complexity Low_complexity 1 21 0 324 319 7 30 chr10 117481944 117482079 -28107209 + L1M4 LINE L1 4236 4367 -1779 3930 178 16 9 chr10 117482888 117483563 -28105725 + MER54B LTR ERVL 1 680 -113 2200 92 0 3 chr10 117483744 117484026 -28105262 + AluSp SINE Alu 1 281 -32 207 0 0 0 chr10 117484027 117484050 -28105238 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 660 210 86 56 chr10 117484425 117484587 -28104701 - MER58A DNA MER1_type 0 167 1 3974 138 27 5 chr10 117484866 117485496 -28103792 - LTR9B LTR ERV1 0 644 1 248 321 100 14 chr10 117486834 117486974 -28102314 + MER5A DNA MER1_type 35 186 -3 290 360 105 31 chr10 117486979 117487273 -28102015 - L3 LINE CR1 -42 1535 1220 295 283 131 41 chr10 117487828 117487973 -28101315 + Charlie8 DNA MER1_type 96 253 -2164 383 302 39 23 chr10 117488174 117488303 -28100985 + MIR SINE MIR 13 143 -119 2889 10 0 0 chr10 117489171 117489485 -28099803 - AluYb8 SINE Alu -4 314 1 248 309 22 96 chr10 117489488 117489624 -28099664 + MER5A DNA MER1_type 61 186 -3 314 346 15 15 chr10 117491162 117491292 -28097996 + MLT1K LTR MaLR 38 167 -421 382 250 52 26 chr10 117491430 117491546 -28097742 + MLT1K LTR MaLR 345 463 -125 558 263 52 66 chr10 117491646 117491687 -28097601 + MER63A DNA MER1_type 1 41 -1647 342 0 0 0 chr10 117491687 117491725 -28097563 + (TG)n Simple_repeat Simple_repeat 2 39 0 558 263 52 66 chr10 117491725 117491896 -28097392 + MER63A DNA MER1_type 41 210 0 413 331 11 17 chr10 117492225 117492406 -28096882 + MIR SINE MIR 82 261 -1 237 232 0 0 chr10 117492438 117492494 -28096794 - L1ME LINE L1 -4979 1563 1508 327 266 19 25 chr10 117492511 117492669 -28096619 - L1ME LINE L1 -5072 1562 1406 296 224 60 35 chr10 117492804 117492920 -28096368 - L1ME LINE L1 -5426 1208 1090 498 291 53 64 chr10 117493212 117493352 -28095936 - L1ME LINE L1 -5644 990 850 1890 136 17 41 chr10 117493352 117493441 -28095847 - MER1B DNA MER1_type -2373 337 247 423 0 0 0 chr10 117493441 117493488 -28095800 + (TG)n Simple_repeat Simple_repeat 1 47 0 1890 136 17 41 chr10 117493488 117493743 -28095545 - MER1B DNA MER1_type -2463 247 1 498 291 53 64 chr10 117493743 117493963 -28095325 - L1ME LINE L1 -5784 850 634 1938 147 202 63 chr10 117495561 117496100 -28093188 - LTR18B LTR ERVL 0 614 1 242 336 78 18 chr10 117496313 117496530 -28092758 - L2 LINE L2 -911 2403 2174 649 264 55 105 chr10 117497262 117497680 -28091608 - MLT1F1 LTR MaLR -187 403 6 198 0 0 0 chr10 117497781 117497803 -28091485 + (TA)n Simple_repeat Simple_repeat 1 22 0 2323 96 3 0 chr10 117497809 117498100 -28091188 - AluSp SINE Alu -19 294 3 363 300 94 18 chr10 117499403 117499573 -28089715 - MIR SINE MIR -60 202 20 231 279 29 29 chr10 117499696 117499764 -28089524 + L2 LINE L2 3201 3268 -4 201 133 0 0 chr10 117500978 117501008 -28088280 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 192 282 59 47 chr10 117501271 117501356 -28087932 - MIR SINE MIR -112 150 65 218 139 47 0 chr10 117502225 117502268 -28087020 + (TTCA)n Simple_repeat Simple_repeat 1 45 0 274 312 0 21 chr10 117503213 117503306 -28085982 - MLT1K LTR MaLR -406 182 92 337 315 94 33 chr10 117503711 117503892 -28085396 - MIR SINE MIR -65 197 6 406 321 103 0 chr10 117505044 117505209 -28084079 + MIR SINE MIR 1 182 -80 399 21 0 0 chr10 117506541 117506589 -28082699 + (GA)n Simple_repeat Simple_repeat 1 48 0 217 360 75 12 chr10 117507071 117507232 -28082056 - MIR SINE MIR -63 199 29 340 174 170 71 chr10 117507350 117507527 -28081761 - MIR SINE MIR -49 213 15 1783 152 0 7 chr10 117508783 117509066 -28080222 + AluSc SINE Alu 1 281 -28 513 260 43 135 chr10 117509125 117509517 -28079771 + MLT1H LTR MaLR 1 356 -193 2560 37 0 0 chr10 117509520 117509814 -28079474 - AluY SINE Alu -6 305 12 1588 150 47 90 chr10 117509814 117510206 -28079082 + MER67C LTR ERV1 2 403 -243 526 228 137 33 chr10 117510184 117510395 -28078893 + MER67D LTR ERV1 282 514 0 * 279 191 24 48 chr10 117510490 117510574 -28078714 + MLT1H LTR MaLR 500 581 -14 1468 223 30 14 chr10 117511091 117511458 -28077830 + MLT2D LTR ERVL 1 373 -41 394 86 61 43 chr10 117511476 117511639 -28077649 + (TA)n Simple_repeat Simple_repeat 1 166 0 269 169 0 34 chr10 117511643 117511702 -28077586 + MLT2D LTR ERVL 464 520 0 1321 245 102 58 chr10 117512456 117512978 -28076310 + MLT1H LTR MaLR 1 545 -4 353 321 203 20 chr10 117513056 117513302 -28075986 + L2 LINE L2 2862 3152 -161 184 128 21 21 chr10 117513432 117513479 -28075809 + GA-rich Low_complexity Low_complexity 2 48 0 22 0 0 0 chr10 117513525 117513547 -28075741 + AT_rich Low_complexity Low_complexity 1 22 0 186 133 0 0 chr10 117513626 117513656 -28075632 + (TAA)n Simple_repeat Simple_repeat 1 30 0 1734 179 0 17 chr10 117513921 117514211 -28075077 - AluJo SINE Alu -22 290 6 372 338 107 4 chr10 117515957 117516229 -28073059 + MLT1K LTR MaLR 289 588 0 327 313 57 26 chr10 117516289 117516481 -28072807 - LTR16C LTR ERVL -18 473 276 2359 93 51 25 chr10 117516738 117517092 -28072196 - THE1B LTR MaLR -1 363 1 4867 98 22 5 chr10 117517096 117518120 -28071168 - THE1B-int LTR MaLR -4 1576 392 2075 129 13 10 chr10 117518275 117518586 -28070702 + AluSx SINE Alu 1 312 0 25 0 0 0 chr10 117519219 117519244 -28070044 + AT_rich Low_complexity Low_complexity 1 25 0 2998 8 0 0 chr10 117519392 117519744 -28069544 + L1HS LINE L1 5803 6154 -1 2008 180 53 17 chr10 117520790 117521206 -28068082 + MSTB1 LTR MaLR 1 431 -1 1018 123 0 0 chr10 117523021 117523176 -28066112 + L1PA13 LINE L1 5994 6148 -15 233 326 76 0 chr10 117523492 117523624 -28065664 + MER117 DNA MER1_type 56 197 0 257 294 54 65 chr10 117525948 117526132 -28063156 - MIR SINE MIR -46 216 35 207 69 0 0 chr10 117527924 117527953 -28061335 + (TG)n Simple_repeat Simple_repeat 2 30 0 289 405 30 0 chr10 117528319 117528450 -28060838 + L2 LINE L2 3134 3268 -4 1144 282 89 13 chr10 117529260 117529730 -28059558 - MLT1G LTR MaLR -14 565 64 1515 209 13 26 chr10 117529758 117530060 -28059228 + AluJb SINE Alu 1 298 -14 21 0 0 0 chr10 117530064 117530085 -28059203 + AT_rich Low_complexity Low_complexity 1 21 0 3708 177 42 18 chr10 117530583 117531299 -28057989 + MER44D DNA MER2_type 1 605 0 318 336 83 4 chr10 117531859 117532088 -28057200 - MLT1A1-int LTR MaLR -834 537 291 251 252 41 75 chr10 117532197 117532344 -28056944 + MLT1K LTR MaLR 219 360 -228 1182 223 153 36 chr10 117532366 117532896 -28056392 - LTR38B LTR ERV1 -18 592 1 383 271 78 30 chr10 117532911 117533077 -28056211 + MLT1K LTR MaLR 381 554 -34 247 321 170 0 chr10 117533974 117534080 -28055208 + MIR SINE MIR 46 169 -93 243 0 0 0 chr10 117534426 117534453 -28054835 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 228 86 0 0 chr10 117534531 117534566 -28054722 + (TG)n Simple_repeat Simple_repeat 2 36 0 1411 205 31 36 chr10 117534567 117534923 -28054365 - MLT1A1 LTR MaLR -4 361 8 312 27 0 0 chr10 117534930 117534967 -28054321 + (CA)n Simple_repeat Simple_repeat 2 38 0 1851 246 113 39 chr10 117536162 117536728 -28052560 + MLT2F LTR ERVL 1 618 -45 261 0 0 0 chr10 117536728 117536757 -28052531 + (CA)n Simple_repeat Simple_repeat 2 30 0 1851 246 113 39 chr10 117536757 117536807 -28052481 + MLT2F LTR ERVL 618 663 0 212 122 24 0 chr10 117536921 117536962 -28052326 + (TCTA)n Simple_repeat Simple_repeat 4 45 0 21 36 0 0 chr10 117538119 117538147 -28051141 + AT_rich Low_complexity Low_complexity 1 28 0 1177 145 26 0 chr10 117538694 117538887 -28050401 + L1PA16 LINE L1 5969 6166 0 475 293 81 27 chr10 117539020 117539279 -28050009 + HAL1 LINE L1 1301 1573 -934 1819 186 0 7 chr10 117539410 117539716 -28049572 - AluJb SINE Alu -8 304 1 261 353 121 40 chr10 117540348 117540470 -28048818 + L3 LINE CR1 867 978 -599 2261 111 0 7 chr10 117540470 117540777 -28048511 - AluSg SINE Alu -5 305 1 261 353 121 40 chr10 117540777 117541207 -28048081 + L3 LINE CR1 978 1464 -113 264 284 110 0 chr10 117541512 117541621 -28047667 - MER117 DNA MER1_type -76 121 1 256 267 0 80 chr10 117541826 117541842 -28047446 + MER91 DNA MER1_type 3 19 -121 1988 109 7 4 chr10 117541842 117542118 -28047170 - AluSx SINE Alu -8 304 28 256 267 0 80 chr10 117542118 117542176 -28047112 + MER91 DNA MER1_type 19 71 -69 49 43 0 0 chr10 117542374 117542444 -28046844 + AT_rich Low_complexity Low_complexity 1 70 0 3167 22 0 0 chr10 117542444 117542812 -28046476 + L1PA2 LINE L1 5788 6155 0 22 0 0 0 chr10 117542825 117542847 -28046441 + AT_rich Low_complexity Low_complexity 1 22 0 291 373 56 12 chr10 117542961 117543122 -28046166 - MIR3 SINE MIR -22 186 19 25 0 0 0 chr10 117543885 117543910 -28045378 + AT_rich Low_complexity Low_complexity 1 25 0 562 295 27 27 chr10 117544022 117544205 -28045083 - MIR SINE MIR -41 221 39 200 206 0 0 chr10 117546372 117546406 -28042882 - L2 LINE L2 -30 3283 3250 197 277 15 31 chr10 117546406 117546437 -28042851 - MIR SINE MIR -24 238 175 29 0 0 0 chr10 117548100 117548129 -28041159 + AT_rich Low_complexity Low_complexity 1 29 0 255 297 0 0 chr10 117548320 117548384 -28040904 - L2 LINE L2 0 3313 3250 453 36 0 0 chr10 117548984 117549039 -28040249 + (TG)n Simple_repeat Simple_repeat 2 56 0 25 51 0 0 chr10 117549961 117550000 -28039288 + AT_rich Low_complexity Low_complexity 1 39 0 402 333 20 15 chr10 117550999 117551197 -28038091 - MLT1L LTR MaLR -101 514 316 399 257 48 0 chr10 117552054 117552159 -28037129 - MIR3 SINE MIR -3 205 96 7039 177 26 34 chr10 117552174 117554693 -28034595 + L1MA6 LINE L1 3780 6297 -3 577 302 41 41 chr10 117555593 117555838 -28033450 + MIR SINE MIR 18 262 0 226 71 54 54 chr10 117556029 117556085 -28033203 + (TTATA)n Simple_repeat Simple_repeat 5 60 0 213 246 0 0 chr10 117556096 117556161 -28033127 + (TA)n Simple_repeat Simple_repeat 2 66 0 186 368 40 0 chr10 117557029 117557105 -28032183 + L2 LINE L2 2851 2929 -343 251 356 38 30 chr10 117557257 117557389 -28031899 + L2 LINE L2 3148 3280 -33 1518 110 13 4 chr10 117557902 117558130 -28031158 - AluSp SINE Alu -13 300 71 460 79 0 0 chr10 117558130 117558193 -28031095 - Tigger7 DNA MER2_type -2039 448 386 7653 168 114 29 chr10 117558193 117559811 -28029477 + MER52A LTR ERV1 1 1755 0 449 170 0 64 chr10 117559812 117559906 -28029382 - Tigger7 DNA MER2_type -2100 387 300 245 270 79 11 chr10 117559877 117559966 -28029322 - MLT1L LTR MaLR -520 95 1 * 1665 233 0 0 chr10 117559996 117560314 -28028974 - Tigger7 DNA MER2_type -2169 318 1 1072 257 32 35 chr10 117560314 117560718 -28028570 - L1MA9 LINE L1 -44 6268 5866 286 323 35 87 chr10 117560751 117561005 -28028283 + L2 LINE L2 3028 3268 -4 296 315 98 67 chr10 117561073 117561429 -28027859 + MLT1J LTR MaLR 1 367 -144 7221 64 16 0 chr10 117563583 117565287 -28024001 + L1PA6 LINE L1 4429 6153 -1 563 302 45 18 chr10 117565626 117565848 -28023440 - MIR SINE MIR -18 244 17 383 194 152 31 chr10 117567549 117567740 -28021548 - L1ME4a LINE L1 -38 6083 5870 363 263 105 0 chr10 117568643 117568757 -28020531 + LTR16C LTR ERVL 364 489 -2 455 287 46 26 chr10 117569003 117569198 -28020090 + MIR SINE MIR 64 262 0 180 0 0 0 chr10 117569471 117569491 -28019797 + (TTTC)n Simple_repeat Simple_repeat 2 21 0 6059 111 0 2 chr10 117569492 117570662 -28018626 - L1PA8 LINE L1 0 6172 5006 1502 244 101 7 chr10 117570663 117571101 -28018187 + MLT1D LTR MaLR 27 505 0 2273 122 44 6 chr10 117571105 117571466 -28017822 + THE1C LTR MaLR 1 375 0 275 0 29 0 chr10 117571961 117571996 -28017292 + (CA)n Simple_repeat Simple_repeat 2 37 0 4073 157 30 40 chr10 117572669 117573511 -28015777 + L1MA7 LINE L1 5459 6291 0 421 310 145 30 chr10 117573563 117573956 -28015332 - MLT1L LTR MaLR -10 605 168 305 298 95 25 chr10 117575782 117575940 -28013348 - MIR3 SINE MIR -3 205 37 407 306 115 27 chr10 117575969 117576152 -28013136 + MIR SINE MIR 14 212 -50 415 256 60 0 chr10 117576227 117576344 -28012944 + MER45A DNA AcHobo 55 178 0 212 262 0 0 chr10 117576344 117576386 -28012902 + L2 LINE L2 3256 3297 -16 206 130 22 43 chr10 117576867 117576913 -28012375 + A-rich Low_complexity Low_complexity 2 46 0 4071 264 79 47 chr10 117577114 117579904 -28009384 + L1MB8 LINE L1 9 3013 -3631 2751 232 64 31 chr10 117579950 117580589 -28008699 - L1MCa LINE L1 -4849 1058 441 2268 137 28 14 chr10 117580589 117580948 -28008340 - THE1B LTR MaLR 0 364 1 10673 122 14 2 chr10 117580950 117582510 -28006778 - THE1B-int LTR MaLR -2 1578 1 2118 162 31 14 chr10 117582510 117582868 -28006420 - THE1B LTR MaLR 0 364 1 2751 232 64 31 chr10 117582868 117583478 -28005810 - L1MCa LINE L1 -5465 442 19 913 274 48 11 chr10 117583497 117583957 -28005331 + L1MB8 LINE L1 3070 3546 -3098 * 2544 259 47 45 chr10 117583940 117584997 -28004291 + L1MB8 LINE L1 4473 5532 -1112 1538 115 1 3 chr10 117585005 117585237 -28004051 + L1MC/D LINE L1 5582 5806 -360 239 208 0 19 chr10 117585237 117585290 -28003998 + (TA)n Simple_repeat Simple_repeat 1 52 0 2458 122 3 0 chr10 117585290 117585659 -28003629 + L1PB1 LINE L1 5782 6151 0 779 164 38 0 chr10 117585670 117585829 -28003459 + L1MB8 LINE L1 5542 5706 -938 1036 157 59 5 chr10 117585835 117586039 -28003249 + L1MB8 LINE L1 5915 6129 -543 208 209 15 15 chr10 117586057 117586124 -28003164 + (TA)n Simple_repeat Simple_repeat 2 68 0 516 130 53 0 chr10 117586138 117586245 -28003043 + L1MB8 LINE L1 6173 6284 -388 4801 196 25 45 chr10 117586247 117587932 -28001356 + L1MC2 LINE L1 4709 6344 0 1276 217 70 8 chr10 117587936 117588305 -28000983 + L1MB8 LINE L1 6271 6662 -14 658 228 49 0 chr10 117588748 117588910 -28000378 + MER3 DNA MER1_type 1 123 -86 334 214 29 29 chr10 117589974 117590077 -27999211 + GA-rich Low_complexity Low_complexity 3 105 0 673 281 139 45 chr10 117590423 117590847 -27998441 - MLT1H LTR MaLR -15 534 71 961 198 0 0 chr10 117591876 117592048 -27997240 + MER20 DNA MER1_type 48 219 0 3013 97 29 31 chr10 117592159 117592612 -27996676 + MLT2A2 LTR ERVL 1 452 -1 1073 196 35 4 chr10 117592612 117592841 -27996447 + L1 LINE L1 3521 3756 -2390 1890 193 161 158 chr10 117592931 117593349 -27995939 - L1MD3 LINE L1 -14 7981 7566 2069 118 0 7 chr10 117593349 117593646 -27995642 + AluSg SINE Alu 1 295 -15 1890 193 161 158 chr10 117593646 117593724 -27995564 - L1MD3 LINE L1 -429 7566 7490 277 188 0 0 chr10 117593724 117593772 -27995516 + MLT2A1 LTR ERVL 320 367 -77 1890 193 161 158 chr10 117593772 117593865 -27995423 - L1MD3 LINE L1 -505 7490 7399 498 266 31 0 chr10 117593865 117593993 -27995295 - MLT1F1 LTR MaLR -433 134 3 1890 193 161 158 chr10 117593993 117594574 -27994714 - L1MD3 LINE L1 -596 7399 6631 956 224 10 57 chr10 117594585 117594884 -27994404 - L1MA10 LINE L1 0 6334 6050 668 316 50 68 chr10 117594881 117595695 -27993593 - L1ME LINE L1 -5174 896 97 * 330 303 117 7 chr10 117596544 117596689 -27992599 + L1MA9 LINE L1 2 162 -5979 1862 149 3 10 chr10 117596692 117596981 -27992307 - AluJb SINE Alu -14 298 12 2773 182 12 33 chr10 117597231 117597829 -27991459 - LTR60 LTR ERV1 -1 585 1 327 254 0 0 chr10 117597829 117597892 -27991396 + L1MA9 LINE L1 182 244 -5897 232 222 74 0 chr10 117597889 117597970 -27991318 + L1MA9 LINE L1 3279 3365 -2845 * 2430 185 33 12 chr10 117597970 117598653 -27990635 + L1MA9 LINE L1 5149 5849 -527 572 197 83 8 chr10 117598653 117598785 -27990503 + AluJb SINE Alu 162 303 -9 28 0 0 0 chr10 117598830 117598858 -27990430 + AT_rich Low_complexity Low_complexity 1 28 0 1666 178 90 52 chr10 117598881 117598999 -27990289 + L1MA9 LINE L1 5878 5990 -386 3721 103 18 31 chr10 117598999 117599570 -27989718 - MER61E LTR ERV1 -4 565 3 1666 178 90 52 chr10 117599570 117599804 -27989484 + L1MA9 LINE L1 5990 6253 -123 4777 54 2 3 chr10 117599804 117600396 -27988892 + LTR10C LTR ERV1 1 591 0 1666 178 90 52 chr10 117600396 117600486 -27988802 + L1MA9 LINE L1 6253 6338 -38 3102 191 49 22 chr10 117600663 117601359 -27987929 + LTR8A LTR ERV1 1 715 -12 3239 229 26 11 chr10 117601381 117601649 -27987639 + MER21B LTR ERV1 15 277 -586 5058 132 45 25 chr10 117601649 117602534 -27986754 - MER4D LTR ERV1 0 903 1 3239 229 26 11 chr10 117602534 117602917 -27986371 + MER21B LTR ERV1 277 676 -187 21 0 0 0 chr10 117605592 117605613 -27983675 + AT_rich Low_complexity Low_complexity 1 21 0 189 0 0 0 chr10 117605667 117605688 -27983600 + (TTA)n Simple_repeat Simple_repeat 2 22 0 2346 50 0 4 chr10 117605691 117605971 -27983317 - AluY SINE Alu -32 279 1 679 227 100 22 chr10 117606076 117606397 -27982891 + L1MEc LINE L1 2138 2483 -3913 2398 71 0 13 chr10 117606418 117606729 -27982559 - AluY SINE Alu -4 307 1 1043 280 51 3 chr10 117606804 117607140 -27982148 - L1MEc LINE L1 -6016 380 29 312 70 0 0 chr10 117607218 117607261 -27982027 + (CA)n Simple_repeat Simple_repeat 1 43 0 1625 185 25 39 chr10 117607266 117607623 -27981665 + MLT1A1 LTR MaLR 14 365 0 406 111 0 25 chr10 117607660 117607741 -27981547 + (GA)n Simple_repeat Simple_repeat 2 80 0 941 185 0 6 chr10 117608064 117608221 -27981067 - FAM SINE Alu -19 156 1 386 349 142 21 chr10 117608268 117608781 -27980507 - L2 LINE L2 -454 2860 2286 185 296 10 0 chr10 117609826 117609924 -27979364 + CT-rich Low_complexity Low_complexity 2 100 0 22 0 0 0 chr10 117611562 117611584 -27977704 + AT_rich Low_complexity Low_complexity 1 22 0 39 0 0 0 chr10 117611669 117611708 -27977580 + AT_rich Low_complexity Low_complexity 1 39 0 450 98 22 11 chr10 117612273 117612365 -27976923 + (GA)n Simple_repeat Simple_repeat 1 93 0 4225 138 18 23 chr10 117612498 117613063 -27976225 + MER50 LTR ERV1 1 567 -167 261 0 0 0 chr10 117613063 117613092 -27976196 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 2145 73 3 35 chr10 117613095 117613384 -27975904 - AluY SINE Alu -31 280 1 4225 138 18 23 chr10 117613384 117613523 -27975765 + MER50 LTR ERV1 569 706 -28 436 237 21 0 chr10 117613967 117614060 -27975228 - Tigger7 DNA MER2_type 0 2487 2393 1293 205 47 0 chr10 117614063 117614317 -27974971 - Tigger7 DNA MER2_type -467 266 1 1354 181 61 105 chr10 117614326 117614496 -27974792 + MER67C LTR ERV1 1 177 -337 2530 0 0 25 chr10 117614496 117614781 -27974507 + AluYa5 SINE Alu 34 311 0 1354 181 61 105 chr10 117614781 117615156 -27974132 + MER67C LTR ERV1 177 479 -35 485 217 8 0 chr10 117616530 117616659 -27972629 + CT-rich Low_complexity Low_complexity 1 130 0 399 310 148 15 chr10 117616725 117616928 -27972360 - MIR SINE MIR -28 234 5 804 197 16 16 chr10 117617017 117617200 -27972088 + AluSg/x SINE Alu 126 308 -2 714 298 145 33 chr10 117617562 117618890 -27970398 + L1ME1 LINE L1 37 1512 -4884 2292 234 44 90 chr10 117618899 117619310 -27969978 + L1M4 LINE L1 1 430 -6112 1228 163 59 7 chr10 117619310 117619580 -27969708 - L1MA8 LINE L1 -1 6290 6007 2292 234 44 90 chr10 117619580 117619641 -27969647 + L1M4 LINE L1 430 492 -6050 345 93 0 0 chr10 117619641 117619695 -27969593 + (TG)n Simple_repeat Simple_repeat 2 55 0 2292 234 44 90 chr10 117619695 117620084 -27969204 + L1M4 LINE L1 492 823 -5719 1408 237 100 2 chr10 117620080 117620540 -27968748 + L1M4 LINE L1 3035 3539 -3105 * 2113 251 82 13 chr10 117620554 117621884 -27967404 + L1ME1 LINE L1 1697 3089 -3126 1138 269 146 14 chr10 117621916 117622540 -27966748 + L1ME1 LINE L1 5426 6131 -104 274 368 23 0 chr10 117622638 117622725 -27966563 - MIR SINE MIR -131 131 43 1652 159 73 66 chr10 117623015 117623352 -27965936 + MLT2D LTR ERVL 1 343 -71 824 0 10 0 chr10 117623352 117623448 -27965840 + (TCTA)n Simple_repeat Simple_repeat 1 97 0 1652 159 73 66 chr10 117623448 117623519 -27965769 + MLT2D LTR ERVL 343 412 -2 319 344 54 62 chr10 117623597 117623838 -27965450 - MIR SINE MIR -11 251 13 680 332 13 9 chr10 117624130 117624356 -27964932 - MIR SINE MIR -4 258 32 24 32 0 0 chr10 117624760 117624791 -27964497 + AT_rich Low_complexity Low_complexity 1 31 0 236 410 0 32 chr10 117625465 117625560 -27963728 + MER91A DNA MER1_type 18 109 -87 1423 184 18 0 chr10 117625601 117625878 -27963410 - L1PB4 LINE L1 -1 6155 5874 222 222 0 19 chr10 117626048 117626102 -27963186 + CT-rich Low_complexity Low_complexity 2 54 0 16153 156 36 31 chr10 117628982 117631403 -27957885 + Tigger3(Golem) DNA MER2_type 1 2409 -620 1852 111 3 59 chr10 117631403 117631710 -27957578 + AluSc SINE Alu 1 290 -19 16153 156 36 31 chr10 117631710 117631967 -27957321 + Tigger3(Golem) DNA MER2_type 2409 2663 -366 195 42 0 0 chr10 117631967 117631991 -27957297 + (CTCA)n Simple_repeat Simple_repeat 1 24 0 16153 156 36 31 chr10 117631991 117632325 -27956963 + Tigger3(Golem) DNA MER2_type 2663 3028 -1 2643 232 6 9 chr10 117632568 117633103 -27956185 - MER74A LTR ERVL 0 558 26 293 311 39 10 chr10 117633188 117633291 -27955997 - MIR SINE MIR -67 195 90 558 311 78 8 chr10 117633835 117634079 -27955209 + MIR SINE MIR 2 262 0 180 179 0 0 chr10 117634202 117634241 -27955047 + CT-rich Low_complexity Low_complexity 3 41 0 281 285 108 13 chr10 117634606 117634764 -27954524 - L1MC/D LINE L1 -2077 5731 5559 22 35 0 0 chr10 117635265 117635294 -27953994 + AT_rich Low_complexity Low_complexity 1 29 0 296 316 29 65 chr10 117635905 117636044 -27953244 - MIR3 SINE MIR -64 144 11 596 14 14 0 chr10 117636314 117636387 -27952901 + (TCTA)n Simple_repeat Simple_repeat 1 74 0 2620 58 0 0 chr10 117636541 117636851 -27952437 + AluY SINE Alu 1 310 -1 1059 214 35 8 chr10 117637229 117637486 -27951802 - L1 LINE L1 -2321 3825 3562 5363 178 31 33 chr10 117637505 117639519 -27949769 - L1MA4 LINE L1 -11 6289 4281 894 269 134 11 chr10 117639544 117640210 -27949078 + L1MB8 LINE L1 2637 3384 -2762 2998 204 38 58 chr10 117640354 117641203 -27948085 + L1MB8 LINE L1 5283 6114 -64 33 0 0 0 chr10 117641227 117641260 -27948028 + AT_rich Low_complexity Low_complexity 1 33 0 1909 205 17 12 chr10 117641288 117641697 -27947591 + MLT2D LTR ERVL 4 414 0 1886 242 86 40 chr10 117641741 117642174 -27947114 + L1ME2 LINE L1 5170 5582 -582 1816 75 34 4 chr10 117642174 117642413 -27946875 + AluY SINE Alu 50 295 -16 1886 242 86 40 chr10 117642413 117642903 -27946385 + L1ME2 LINE L1 5582 6138 -26 34 42 0 0 chr10 117643375 117643423 -27945865 + AT_rich Low_complexity Low_complexity 1 48 0 1459 251 40 84 chr10 117644150 117645007 -27944281 - L1MC4 LINE L1 0 8042 7224 1535 198 0 26 chr10 117645629 117645942 -27943346 + AluJb SINE Alu 1 305 -7 2554 43 30 0 chr10 117646360 117646662 -27942626 - AluY SINE Alu 0 311 1 2485 53 17 0 chr10 117647665 117647965 -27941323 - AluY SINE Alu -6 305 1 557 287 98 53 chr10 117648595 117649055 -27940233 + L2 LINE L2 2779 3267 -5 302 305 0 0 chr10 117649454 117649536 -27939752 + GA-rich Low_complexity Low_complexity 3 84 0 188 299 37 56 chr10 117651621 117651728 -27937560 + L2 LINE L2 3191 3295 -18 595 278 6 40 chr10 117651782 117651955 -27937333 - MER5B DNA MER1_type 0 178 12 2136 118 16 0 chr10 117652264 117652568 -27936720 + AluSx SINE Alu 1 309 -3 189 121 0 0 chr10 117654155 117654188 -27935100 + (A)n Simple_repeat Simple_repeat 1 33 0 1797 170 7 73 chr10 117654229 117654641 -27934647 - MLT1B LTR MaLR 0 390 6 347 319 9 0 chr10 117654971 117655087 -27934201 - HERV16 LTR ERVL -795 4859 4743 745 323 56 27 chr10 117655132 117655816 -27933472 - HERV16 LTR ERVL -880 4401 3437 1797 326 31 16 chr10 117656294 117657065 -27932223 - HERV16 LTR ERVL -1917 3079 2297 386 231 0 44 chr10 117657081 117657172 -27932116 + MER96 DNA MER1_type? 84 170 -5 1834 331 78 33 chr10 117657180 117659288 -27930000 - HERV16 LTR ERVL -2715 2281 13 476 316 37 25 chr10 117659305 117659594 -27929694 - LTR16A LTR ERVL -6 444 120 235 280 110 42 chr10 117659914 117660032 -27929256 + MIR SINE MIR 49 174 -88 273 119 0 0 chr10 117661555 117661597 -27927691 + (GGAA)n Simple_repeat Simple_repeat 2 43 0 367 335 86 10 chr10 117661877 117662086 -27927202 - MIR SINE MIR -26 236 12 711 247 72 74 chr10 117662198 117662575 -27926713 - LTR40b LTR ERVL 0 462 87 21 36 0 0 chr10 117662691 117662719 -27926569 + AT_rich Low_complexity Low_complexity 1 28 0 2294 99 0 0 chr10 117663232 117663524 -27925764 + AluY SINE Alu 12 303 -8 573 313 70 10 chr10 117665087 117665288 -27924000 - MIR SINE MIR -33 229 17 341 338 58 6 chr10 117665907 117666075 -27923213 - MIR SINE MIR -43 219 43 1640 297 43 6 chr10 117666259 117666794 -27922494 + MLT1H1 LTR MaLR 1 555 0 195 42 0 0 chr10 117667524 117667548 -27921740 + (CA)n Simple_repeat Simple_repeat 2 25 0 1365 204 31 81 chr10 117667699 117667936 -27921352 - MSTB1 LTR MaLR 0 432 226 2261 125 0 0 chr10 117667936 117668249 -27921039 - AluSq SINE Alu 0 313 1 1365 204 31 81 chr10 117668249 117668458 -27920830 - MSTB1 LTR MaLR -206 226 8 431 346 35 10 chr10 117668587 117668789 -27920499 + MIR SINE MIR 48 254 -8 1713 185 0 7 chr10 117669203 117669501 -27919787 - AluJo SINE Alu 0 312 17 2302 73 14 0 chr10 117669974 117670261 -27919027 + AluY SINE Alu 1 291 -20 420 333 157 19 chr10 117670941 117671100 -27918188 - MER91A DNA MER1_type -15 181 1 2230 110 3 0 chr10 117673264 117673574 -27915714 + AluY SINE Alu 1 311 0 364 357 33 0 chr10 117673933 117674115 -27915173 + MIR SINE MIR 45 232 -30 2940 75 59 12 chr10 117674148 117674526 -27914762 + MLT2A1 LTR ERVL 1 403 -41 312 27 0 0 chr10 117674526 117674563 -27914725 + (CA)n Simple_repeat Simple_repeat 2 38 0 2940 75 59 12 chr10 117674563 117674608 -27914680 + MLT2A1 LTR ERVL 403 444 0 17090 84 2 16 chr10 117674608 117677022 -27912266 + HERVL-A1 LTR ERVL 1 2381 -3273 3060 76 12 0 chr10 117677015 117677437 -27911851 + HERVL-A1 LTR ERVL 5228 5654 0 * 2883 101 11 33 chr10 117677437 117677586 -27911702 + MLT2A1 LTR ERVL 1 152 -292 2084 147 8 40 chr10 117677586 117677961 -27911327 - THE1B LTR MaLR 0 364 2 2883 101 11 33 chr10 117677961 117678265 -27911023 + MLT2A1 LTR ERVL 152 444 0 358 322 41 29 chr10 117679438 117679609 -27909679 + MIR SINE MIR 1 173 -89 183 80 0 0 chr10 117679923 117679948 -27909340 + (TCC)n Simple_repeat Simple_repeat 2 26 0 233 167 19 0 chr10 117679956 117680010 -27909278 + CT-rich Low_complexity Low_complexity 2 56 0 237 132 0 0 chr10 117680316 117680354 -27908934 + (TAGA)n Simple_repeat Simple_repeat 1 38 0 364 192 13 0 chr10 117680387 117680465 -27908823 - HAL1b LINE L1 -278 1070 992 229 333 0 0 chr10 117681120 117681204 -27908084 + MIR SINE MIR 85 168 -94 35 24 0 0 chr10 117681208 117681250 -27908038 + AT_rich Low_complexity Low_complexity 1 42 0 1064 314 49 5 chr10 117682185 117682592 -27906696 - MER70A LTR ERVL -36 436 12 255 175 0 0 chr10 117682739 117682796 -27906492 + CT-rich Low_complexity Low_complexity 2 58 0 202 357 0 0 chr10 117682983 117683053 -27906235 - MER5A DNA MER1_type -113 76 7 1533 182 29 70 chr10 117683195 117683640 -27905648 + MER67D LTR ERV1 84 510 -4 425 364 23 0 chr10 117683874 117684003 -27905285 + L2 LINE L2 3116 3247 -25 2571 143 19 5 chr10 117684003 117684423 -27904865 - MSTA LTR MaLR -2 426 1 234 358 44 36 chr10 117684576 117684624 -27904664 + MIR3 SINE MIR 40 86 -122 2425 122 6 3 chr10 117684624 117684978 -27904310 - THE1A LTR MaLR 0 355 1 234 358 44 36 chr10 117684978 117685066 -27904222 + MIR3 SINE MIR 86 177 -31 1155 208 13 26 chr10 117686252 117686537 -27902751 + LTR1 LTR ERV1 2 249 -536 * 1740 196 74 3 chr10 117686530 117686882 -27902406 + LTR1B LTR ERV1 450 826 0 419 293 78 50 chr10 117686887 117687101 -27902187 + MIR SINE MIR 39 255 -7 2517 31 0 0 chr10 117687980 117688266 -27901022 - AluY SINE Alu -25 286 1 903 211 43 0 chr10 117688386 117688595 -27900693 - L1MB3 LINE L1 -8 6175 5958 322 306 38 44 chr10 117688622 117688805 -27900483 + L1MC4 LINE L1 5139 5320 -826 755 320 56 11 chr10 117688830 117689194 -27900094 + L1MC4 LINE L1 5347 5744 -2064 2408 77 7 0 chr10 117689194 117689494 -27899794 + AluSc SINE Alu 1 302 -7 755 320 56 11 chr10 117689494 117689664 -27899624 + L1MC4 LINE L1 5744 5905 -1903 27 0 0 0 chr10 117689703 117689730 -27899558 + AT_rich Low_complexity Low_complexity 1 27 0 1228 231 100 16 chr10 117689864 117690315 -27898973 + L1MC4 LINE L1 7186 7674 -368 332 251 32 16 chr10 117690361 117690548 -27898740 - L1M4 LINE L1 -822 5324 5135 1572 278 75 33 chr10 117690629 117691896 -27897392 - L1M4 LINE L1 -1546 4600 3281 21 36 0 0 chr10 117692026 117692054 -27897234 + AT_rich Low_complexity Low_complexity 1 28 0 3556 247 49 43 chr10 117692831 117693415 -27895873 + L1M4 LINE L1 3268 3847 -2299 2071 126 0 0 chr10 117693415 117693708 -27895580 + AluY SINE Alu 1 293 -18 3556 247 49 43 chr10 117693708 117694688 -27894600 + L1M4 LINE L1 3847 4841 -1305 219 239 0 0 chr10 117694853 117694920 -27894368 + G-rich Low_complexity Low_complexity 1 67 0 934 164 41 41 chr10 117695054 117695141 -27894147 - L1M4 LINE L1 -665 5513 5427 399 21 0 0 chr10 117695141 117695189 -27894099 + (TA)n Simple_repeat Simple_repeat 2 49 0 2457 64 0 19 chr10 117695191 117695503 -27893785 - AluY SINE Alu -5 306 1 934 164 41 41 chr10 117695503 117695631 -27893657 - L1M4 LINE L1 -751 5427 5295 715 215 11 23 chr10 117695644 117695821 -27893467 - AluSg/x SINE Alu -10 300 126 25 0 0 0 chr10 117695939 117695964 -27893324 + GC_rich Low_complexity Low_complexity 1 25 0 570 263 129 43 chr10 117696253 117696485 -27892803 + L2 LINE L2 2122 2373 -941 600 301 71 21 chr10 117697687 117697969 -27891319 + L2 LINE L2 2189 2484 -830 977 32 103 0 chr10 117698028 117698154 -27891134 + MER85 DNA T2_type 1 139 0 1011 191 30 82 chr10 117699451 117699817 -27889471 - Charlie2 DNA MER1_type -19 2843 2497 367 184 116 0 chr10 117699847 117699994 -27889294 - Charlie2 DNA MER1_type -443 2419 2256 510 240 0 8 chr10 117699999 117700128 -27889160 - AluJb SINE Alu -6 306 179 192 77 0 0 chr10 117700128 117700154 -27889134 + (T)n Simple_repeat Simple_repeat 1 26 0 316 331 39 0 chr10 117700515 117700645 -27888643 - L3 LINE CR1 -596 981 847 257 106 0 21 chr10 117700645 117700692 -27888596 - Charlie2 DNA MER1_type -756 2106 2061 184 340 82 0 chr10 117700785 117700882 -27888406 - L3 LINE CR1 -861 716 612 373 207 73 0 chr10 117701050 117701132 -27888156 + MIR SINE MIR 169 256 -6 474 251 40 40 chr10 117701156 117701379 -27887909 + Charlie2 DNA MER1_type 2 224 -2558 392 186 234 8 chr10 117701466 117701590 -27887698 + Charlie2 DNA MER1_type 1897 2048 -814 245 359 0 8 chr10 117702755 117702886 -27886402 + C-rich Low_complexity Low_complexity 3 132 0 6923 58 18 9 chr10 117703071 117704035 -27885253 + HERVH LTR ERV1 6742 7713 0 1336 67 5 10 chr10 117704035 117704243 -27885045 + LTR7 LTR ERV1 1 182 -268 7116 68 5 0 chr10 117704659 117705610 -27883678 + MER11C LTR ERVK 1 956 -115 26 30 0 0 chr10 117706230 117706263 -27883025 + AT_rich Low_complexity Low_complexity 1 33 0 214 191 21 0 chr10 117706305 117706352 -27882936 + (TCTA)n Simple_repeat Simple_repeat 2 49 0 292 241 32 51 chr10 117706558 117706716 -27882572 - L1ME3A LINE L1 -221 5949 5795 276 267 69 26 chr10 117707326 117707442 -27881846 + MIR SINE MIR 129 249 -13 342 129 0 0 chr10 117707482 117707544 -27881744 + (TTCC)n Simple_repeat Simple_repeat 3 64 0 1579 184 50 0 chr10 117707538 117707853 -27881435 - AluJb SINE Alu 0 345 17 648 235 77 32 chr10 117708074 117708295 -27880993 + Charlie8 DNA MER1_type 4 234 -2183 214 245 32 106 chr10 117708895 117708989 -27880299 - L2 LINE L2 -1 3312 3226 237 289 44 22 chr10 117709263 117709353 -27879935 - L2 LINE L2 -213 3059 2968 1947 176 51 21 chr10 117709353 117710135 -27879153 + MER21B LTR ERV1 1 861 -2 212 219 178 27 chr10 117710465 117710538 -27878750 - MIR SINE MIR -73 189 106 278 267 86 19 chr10 117710606 117710711 -27878577 - MIR SINE MIR -109 153 42 807 207 94 51 chr10 117710797 117711149 -27878139 + MLT1E2 LTR MaLR 1 367 -138 458 205 57 0 chr10 117711737 117711859 -27877429 + FLAM_A SINE Alu 14 142 0 1957 152 0 14 chr10 117711870 117712166 -27877122 + AluJb SINE Alu 1 292 -20 805 126 0 7 chr10 117712177 117712312 -27876976 + L1MB4 LINE L1 6034 6167 -13 180 321 206 8 chr10 117712803 117712934 -27876354 - MIR SINE MIR -86 176 20 191 231 13 39 chr10 117713144 117713300 -27875988 + CT-rich Low_complexity Low_complexity 4 155 0 1005 74 22 0 chr10 117713421 117713556 -27875732 - AluSp SINE Alu -175 138 1 21 36 0 0 chr10 117713563 117713591 -27875697 + AT_rich Low_complexity Low_complexity 1 28 0 326 273 32 39 chr10 117715543 117715697 -27873591 + L2 LINE L2 3161 3313 0 518 234 214 23 chr10 117715752 117716009 -27873279 + L1MC4 LINE L1 6656 6961 -1000 1195 129 47 168 chr10 117716032 117716372 -27872916 + AluJb SINE Alu 1 299 -3 452 288 218 31 chr10 117717026 117717412 -27871876 + L1M4 LINE L1 4705 5162 -984 567 192 67 8 chr10 117717413 117717533 -27871755 + FLAM_C SINE Alu 1 127 -16 404 69 0 0 chr10 117717761 117717819 -27871469 - Alu SINE Alu -11 301 244 246 204 133 71 chr10 117718397 117718510 -27870778 + MIR SINE MIR 94 213 -49 206 333 41 34 chr10 117718691 117718838 -27870450 - L2 LINE L2 -8 3305 3158 2171 95 7 10 chr10 117718865 117719161 -27870127 + AluSq SINE Alu 1 295 -18 781 289 140 10 chr10 117719463 117719871 -27869417 + L2 LINE L2 2487 2947 -367 1137 257 60 11 chr10 117720344 117720781 -27868507 - L2 LINE L2 -353 2961 2439 1999 140 14 0 chr10 117720999 117721292 -27867996 - AluSx SINE Alu -9 303 7 366 266 96 23 chr10 117721465 117721642 -27867646 - MLT1K LTR MaLR 0 588 399 741 167 30 0 chr10 117722685 117722817 -27866471 - AluJo/FRAM SINE Alu -16 296 161 1793 142 33 0 chr10 117722817 117723091 -27866197 - AluSx SINE Alu -29 283 1 1177 164 5 19 chr10 117723094 117723308 -27865980 - AluJo SINE Alu -100 212 2 2060 131 3 13 chr10 117723326 117723639 -27865649 - AluSx SINE Alu 0 312 3 1199 223 40 7 chr10 117724064 117724338 -27864950 + MER58B DNA MER1_type 10 292 -49 2218 101 0 13 chr10 117724928 117725226 -27864062 + AluSx SINE Alu 1 294 -18 1323 243 52 11 chr10 117726098 117726542 -27862746 - MLT1C LTR MaLR 0 467 6 360 75 0 0 chr10 117726844 117726897 -27862391 - Alu SINE Alu -1 299 247 35 24 0 0 chr10 117727313 117727355 -27861933 + AT_rich Low_complexity Low_complexity 1 42 0 1277 62 6 0 chr10 117727355 117727515 -27861773 - U1 snRNA snRNA 0 165 5 1668 195 3 3 chr10 117728244 117728542 -27860746 - AluJo SINE Alu -12 300 3 347 280 83 36 chr10 117728543 117728688 -27860600 - MIR SINE MIR -46 162 4 293 173 0 62 chr10 117728760 117728841 -27860447 - FLAM_A SINE Alu -24 109 34 646 261 168 48 chr10 117729485 117729861 -27859427 + MLT1L LTR MaLR 146 566 -49 232 333 29 20 chr10 117729905 117730007 -27859281 + L2 LINE L2 2188 2290 -1024 863 189 58 0 chr10 117730377 117730567 -27858721 + L1MB8 LINE L1 5382 5582 -596 1003 188 18 0 chr10 117730571 117730741 -27858547 - AluJb SINE Alu -9 303 131 1191 228 106 10 chr10 117730744 117731130 -27858158 + L1MB8 LINE L1 5595 6017 -161 298 222 0 39 chr10 117731329 117731482 -27857806 + G-rich Low_complexity Low_complexity 4 150 0 1957 82 50 6 chr10 117731638 117731978 -27857310 + LTR7 LTR ERV1 94 448 -2 399 244 291 29 chr10 117732220 117732601 -27856687 - LTR50 LTR ERVL -280 515 35 248 255 39 111 chr10 117732709 117732774 -27856514 + MIR SINE MIR 44 93 -115 1832 116 4 8 chr10 117732774 117733041 -27856247 - AluSg SINE Alu 0 310 45 248 255 39 111 chr10 117733041 117733118 -27856170 + MIR SINE MIR 93 174 -34 242 302 173 42 chr10 117733171 117733340 -27855948 + MIR SINE MIR 20 208 -54 2539 189 118 24 chr10 117733800 117734159 -27855129 - L1MD2 LINE L1 -333 6026 5702 2359 150 48 25 chr10 117734159 117734633 -27854655 - MER31A LTR ERV1 0 485 1 2539 189 118 24 chr10 117734633 117735125 -27854163 - L1MD2 LINE L1 -657 5702 5098 1095 164 70 59 chr10 117735120 117735406 -27853882 - L1MB7 LINE L1 -171 6013 5725 * 1811 166 3 29 chr10 117735718 117736025 -27853263 + AluJo SINE Alu 3 301 -11 2047 92 57 0 chr10 117736465 117736748 -27852540 + AluSg SINE Alu 1 299 -11 213 39 0 0 chr10 117736882 117736908 -27852380 + (TAA)n Simple_repeat Simple_repeat 2 27 0 227 261 22 65 chr10 117736987 117737079 -27852209 - MIR SINE MIR -24 238 151 279 230 35 35 chr10 117737083 117737170 -27852118 - L2 LINE L2 -5 3308 3222 1028 191 35 12 chr10 117737302 117737559 -27851729 - L1 LINE L1 -2543 3603 3341 2525 150 22 27 chr10 117737560 117738048 -27851240 + L1MB3 LINE L1 5685 6170 -13 512 305 78 67 chr10 117738227 117738689 -27850599 - HAL1 LINE L1 -1625 882 416 916 158 129 18 chr10 117738732 117739004 -27850284 - MER33 DNA MER1_type -22 302 1 424 264 97 53 chr10 117739004 117739332 -27849956 - MLT1I LTR MaLR -17 392 50 2227 115 3 0 chr10 117740042 117740346 -27848942 + AluSg SINE Alu 1 305 -5 457 175 12 0 chr10 117740846 117740926 -27848362 + AluJ/FLAM SINE Alu 21 101 -211 440 309 83 15 chr10 117740937 117741141 -27848147 + HAL1b LINE L1 236 453 -895 234 108 0 0 chr10 117741471 117741508 -27847780 - L1MA9 LINE L1 -67 6245 6209 417 132 13 0 chr10 117741511 117741587 -27847701 + L1MA9 LINE L1 6236 6312 0 315 0 0 0 chr10 117741952 117741987 -27847301 + (CA)n Simple_repeat Simple_repeat 2 36 0 1576 107 5 0 chr10 117742252 117742467 -27846821 - AluSx SINE Alu -40 272 57 403 267 0 0 chr10 117742557 117742677 -27846611 - L1PA16 LINE L1 -1 6165 6046 590 135 0 10 chr10 117744022 117744118 -27845170 + AluS SINE Alu 1 95 -218 507 83 0 60 chr10 117744257 117744341 -27844947 + AluSp/q SINE Alu 177 255 -58 606 256 166 52 chr10 117744922 117745240 -27844048 + L1ME3 LINE L1 3418 3698 -2448 1966 137 0 29 chr10 117745240 117745546 -27843742 - AluSx SINE Alu -15 297 1 606 256 166 52 chr10 117745546 117745964 -27843324 + L1ME3 LINE L1 3698 4238 -1908 624 233 142 41 chr10 117746119 117746458 -27842830 + L1ME3 LINE L1 5766 6138 -24 1729 186 7 61 chr10 117746459 117746868 -27842420 - MLT1B LTR MaLR 0 390 4 885 313 26 57 chr10 117746950 117747446 -27841842 - L2 LINE L2 -1229 2085 1605 838 157 52 29 chr10 117747451 117747623 -27841665 + L1M3 LINE L1 5463 5638 -533 33 0 0 0 chr10 117748417 117748450 -27840838 + AT_rich Low_complexity Low_complexity 1 33 0 3818 190 19 6 chr10 117748728 117749529 -27839759 + L1 LINE L1 4143 4953 -1193 318 325 41 68 chr10 117749993 117750288 -27839000 + L1MC/D LINE L1 5530 5816 -1992 180 152 0 0 chr10 117750374 117750407 -27838881 + (CATA)n Simple_repeat Simple_repeat 4 36 0 22 0 0 0 chr10 117750416 117750438 -27838850 + AT_rich Low_complexity Low_complexity 1 22 0 24 77 0 0 chr10 117750608 117750660 -27838628 + AT_rich Low_complexity Low_complexity 1 52 0 450 270 26 71 chr10 117751377 117751597 -27837691 - L1MEc LINE L1 -3692 2437 2272 1612 74 9 5 chr10 117751597 117751812 -27837476 - AluY SINE Alu -15 296 81 450 270 26 71 chr10 117751812 117752027 -27837261 - L1MEc LINE L1 -3857 2272 2049 231 366 60 34 chr10 117752663 117752898 -27836390 + MIR SINE MIR 22 262 0 2031 137 0 16 chr10 117753550 117753865 -27835423 - AluSx SINE Alu 0 312 3 380 312 163 47 chr10 117754423 117754913 -27834375 + L3 LINE CR1 1022 1568 -9 292 266 28 37 chr10 117755147 117755256 -27834032 + MER5A DNA MER1_type 80 187 -2 185 273 86 72 chr10 117755598 117755737 -27833551 - MER5A DNA MER1_type 0 189 49 572 266 35 7 chr10 117756724 117756867 -27832421 - MIR SINE MIR -13 249 103 455 187 15 15 chr10 117757711 117757845 -27831443 + CT-rich Low_complexity Low_complexity 2 135 0 225 154 0 0 chr10 117757850 117757889 -27831399 + C-rich Low_complexity Low_complexity 4 42 0 306 362 0 0 chr10 117757892 117757986 -27831302 + polypyrimidine Low_complexity Low_complexity 3 96 0 1155 249 76 22 chr10 117758001 117758371 -27830917 - MLT1B LTR MaLR 0 390 1 273 302 74 22 chr10 117758681 117758810 -27830478 + MIR SINE MIR 7 140 -68 328 333 49 0 chr10 117759162 117759285 -27830003 + L2 LINE L2 3185 3313 0 225 320 50 0 chr10 117760287 117760387 -27828901 + L2 LINE L2 2600 2704 -610 444 315 138 61 chr10 117760955 117761743 -27827545 - L1MEc LINE L1 -4433 1877 1029 244 275 99 0 chr10 117761766 117761897 -27827391 - L1MEc LINE L1 -5101 1018 875 286 362 79 41 chr10 117762701 117762991 -27826297 + MLT1J LTR MaLR 104 404 -107 306 0 0 0 chr10 117763120 117763154 -27826134 + (T)n Simple_repeat Simple_repeat 1 34 0 372 43 0 0 chr10 117763947 117763993 -27825295 + (TG)n Simple_repeat Simple_repeat 1 46 0 233 229 0 16 chr10 117764522 117764583 -27824705 + (TTG)n Simple_repeat Simple_repeat 2 61 0 441 292 29 7 chr10 117764606 117764743 -27824545 + MIR SINE MIR 97 236 -26 205 105 53 0 chr10 117764814 117764852 -27824436 + (TCTA)n Simple_repeat Simple_repeat 4 43 0 994 254 42 61 chr10 117765110 117765519 -27823769 - MER93a LTR ERV1 0 402 2 2038 100 3 24 chr10 117765932 117766222 -27823066 - AluSg SINE Alu -26 284 1 350 253 13 0 chr10 117768212 117768291 -27820997 + MIR SINE MIR 183 262 0 298 326 93 39 chr10 117768321 117768450 -27820838 - L2 LINE L2 -7 3306 3171 566 286 82 15 chr10 117768475 117768681 -27820607 - MIR SINE MIR -41 221 2 331 333 7 7 chr10 117769185 117769320 -27819968 + MLT1J2 LTR MaLR 42 176 -274 234 370 20 0 chr10 117769543 117769643 -27819645 - MLT1K LTR MaLR -325 263 162 197 342 13 0 chr10 117770721 117770797 -27818491 + L3 LINE CR1 1422 1498 -79 183 42 0 0 chr10 117770878 117770902 -27818386 + (TTA)n Simple_repeat Simple_repeat 1 24 0 280 314 20 10 chr10 117770959 117771061 -27818227 - MIR SINE MIR -10 252 150 348 24 0 0 chr10 117771063 117771104 -27818184 + (TATG)n Simple_repeat Simple_repeat 2 42 0 222 37 0 0 chr10 117771217 117771244 -27818044 + (CA)n Simple_repeat Simple_repeat 2 28 0 314 310 70 83 chr10 117771249 117771694 -27817594 - L1MC4 LINE L1 -145 7897 7459 2457 65 0 3 chr10 117772136 117772442 -27816846 + AluY SINE Alu 1 305 -6 23 0 0 0 chr10 117772977 117773000 -27816288 + AT_rich Low_complexity Low_complexity 1 23 0 29 110 0 0 chr10 117773186 117773313 -27815975 + AT_rich Low_complexity Low_complexity 1 127 0 2430 83 0 0 chr10 117773858 117774159 -27815129 - AluSg SINE Alu -5 305 5 3276 268 84 33 chr10 117774285 117776274 -27813014 + L1ME LINE L1 3425 5530 -640 1221 211 64 23 chr10 117778018 117778356 -27810932 + MLT1A1 LTR MaLR 11 463 -4 183 316 26 61 chr10 117778705 117778819 -27810469 + L2 LINE L2 2257 2366 -948 254 317 50 33 chr10 117779211 117779331 -27809957 + L2 LINE L2 2933 3054 -218 381 313 33 7 chr10 117779358 117779508 -27809780 - MER63A DNA MER1_type 0 210 57 229 247 27 14 chr10 117779715 117779788 -27809500 + GA-rich Low_complexity Low_complexity 2 75 0 534 261 97 49 chr10 117780338 117780564 -27808724 + MIR SINE MIR 16 252 -10 216 0 0 0 chr10 117781685 117781709 -27807579 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1659 172 55 33 chr10 117781734 117782100 -27807188 + THE1C LTR MaLR 1 374 -1 230 143 20 0 chr10 117782962 117783011 -27806277 + (TATAA)n Simple_repeat Simple_repeat 5 54 0 2223 113 21 43 chr10 117783167 117783539 -27805749 + THE1B LTR MaLR 1 364 0 21 0 0 0 chr10 117783574 117783595 -27805693 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr10 117784156 117784180 -27805108 + AT_rich Low_complexity Low_complexity 1 24 0 294 336 74 21 chr10 117784544 117784735 -27804553 - MIR SINE MIR -12 250 49 285 282 166 17 chr10 117785378 117785559 -27803729 - MIR SINE MIR -41 221 14 2030 141 0 0 chr10 117786978 117787291 -27801997 + AluSq SINE Alu 1 313 0 1081 143 46 0 chr10 117789623 117789798 -27799490 - L1PA15 LINE L1 0 6165 5983 8790 230 48 34 chr10 117789798 117793356 -27795932 - L1PA13 LINE L1 -3175 3622 1 597 318 39 69 chr10 117794014 117794420 -27794868 + L1MA9 LINE L1 399 792 -6774 1761 272 18 29 chr10 117794575 117795417 -27793871 + L1MA9 LINE L1 2275 3088 -4478 10182 241 40 33 chr10 117795430 117796633 -27792655 + L1MA9 LINE L1 3034 4227 -3504 228 67 0 0 chr10 117796633 117796663 -27792625 + (TA)n Simple_repeat Simple_repeat 2 31 0 1911 136 0 4 chr10 117796668 117796947 -27792341 - AluSg SINE Alu -32 278 1 10182 241 40 33 chr10 117796947 117799933 -27789355 + L1MA9 LINE L1 4230 7299 -432 2272 237 8 11 chr10 117800257 117800788 -27788500 + MER41D LTR ERV1 1 529 -28 192 324 9 93 chr10 117801704 117801812 -27787476 + MIR SINE MIR 68 166 -96 26 50 0 0 chr10 117802595 117802635 -27786653 + AT_rich Low_complexity Low_complexity 1 40 0 200 231 15 31 chr10 117803439 117803504 -27785784 + GA-rich Low_complexity Low_complexity 1 64 0 1981 131 6 16 chr10 117804111 117804423 -27784865 + AluSx SINE Alu 3 311 -1 1213 263 38 27 chr10 117804600 117805124 -27784164 - L1MEc LINE L1 -2349 3866 3337 246 284 28 21 chr10 117805639 117805780 -27783508 + CT-rich Low_complexity Low_complexity 1 142 0 186 103 0 0 chr10 117805796 117805825 -27783463 + (TCTCCC)n Simple_repeat Simple_repeat 3 31 0 997 84 0 7 chr10 117805963 117806105 -27783183 + L1MA2 LINE L1 6158 6298 -6 21 36 0 0 chr10 117806109 117806137 -27783151 + AT_rich Low_complexity Low_complexity 1 28 0 352 191 0 86 chr10 117806216 117806321 -27782967 - L1MD2 LINE L1 -363 5996 5901 673 261 177 37 chr10 117806472 117807180 -27782108 - L1MEc LINE L1 -4367 2029 1223 315 370 84 29 chr10 117807399 117807710 -27781578 - L3 LINE CR1 -227 1350 1023 383 258 73 0 chr10 117810005 117810129 -27779159 - MLT2C1 LTR ERVL -264 133 1 663 230 104 7 chr10 117810129 117810399 -27778889 + L1M4 LINE L1 4929 5224 -922 312 248 124 18 chr10 117810416 117810529 -27778759 - MLT1F LTR MaLR 0 542 418 198 0 0 0 chr10 117810640 117810662 -27778626 + (TG)n Simple_repeat Simple_repeat 1 22 0 295 296 148 21 chr10 117811233 117811375 -27777913 + MIR SINE MIR 5 164 -98 204 363 64 34 chr10 117812153 117812387 -27776901 - MIR SINE MIR 0 262 22 214 322 0 0 chr10 117813658 117813717 -27775571 - L2 LINE L2 -5 3308 3250 255 182 182 0 chr10 117814145 117814222 -27775066 - L1MA9 LINE L1 -25 6287 6197 795 149 62 6 chr10 117814239 117814400 -27774888 - L1MA9 LINE L1 -232 6080 5911 204 273 13 65 chr10 117814887 117814964 -27774324 + MER5B DNA MER1_type 21 93 -85 661 299 152 15 chr10 117815688 117815751 -27773537 - L1M4 LINE L1 -921 5225 5172 1784 195 3 0 chr10 117815751 117816054 -27773234 - AluJb SINE Alu -8 304 1 661 299 152 15 chr10 117816054 117816660 -27772628 - L1M4 LINE L1 -974 5172 4464 1295 224 22 72 chr10 117816672 117817127 -27772161 - L1MA9 LINE L1 -7 6305 5874 6771 174 7 27 chr10 117817395 117818610 -27770678 - L1PA13 LINE L1 -4542 2245 1056 2702 109 122 19 chr10 117818728 117819197 -27770091 - THE1B-int LTR MaLR -1063 517 1 2477 126 0 3 chr10 117819197 117819562 -27769726 - THE1B LTR MaLR 0 364 1 988 227 51 49 chr10 117819564 117820075 -27769213 + L1M4 LINE L1 2129 2640 -3506 4123 155 8 7 chr10 117820854 117821564 -27767724 + L1PA13 LINE L1 5453 6163 0 316 239 228 8 chr10 117821666 117821803 -27767485 + MLT1G1 LTR MaLR 371 590 -5 418 317 94 103 chr10 117822336 117822813 -27766475 - L1ME LINE L1 -5488 582 110 291 217 24 12 chr10 117825111 117825166 -27764122 + (TA)n Simple_repeat Simple_repeat 1 59 -25 198 0 0 0 chr10 117825166 117825188 -27764100 + (TG)n Simple_repeat Simple_repeat 2 23 0 291 217 24 12 chr10 117825188 117825215 -27764073 + (TA)n Simple_repeat Simple_repeat 59 84 0 2518 215 20 56 chr10 117825654 117826163 -27763125 - L1MCa LINE L1 -4851 1194 944 1506 91 59 35 chr10 117826163 117826417 -27762871 - L1PA10 LINE L1 -2 6166 5907 2518 215 20 56 chr10 117826417 117826831 -27762457 - L1MCa LINE L1 -5101 944 517 2546 225 10 23 chr10 117826895 117827494 -27761794 - L1MCa LINE L1 -5831 733 143 216 339 0 0 chr10 117828552 117828608 -27760680 - MIR SINE MIR -60 148 93 409 264 97 79 chr10 117829835 117830001 -27759287 + MIR SINE MIR 13 186 -76 2314 107 0 0 chr10 117830001 117830299 -27758989 + AluSg SINE Alu 1 298 -12 409 264 97 79 chr10 117830299 117830359 -27758929 + MIR SINE MIR 186 243 -19 228 186 23 0 chr10 117830516 117830559 -27758729 + MIR SINE MIR 75 118 -144 1272 166 0 0 chr10 117830851 117831056 -27758232 + L1PA13 LINE L1 1 205 -6582 2160 189 58 37 chr10 117831064 117831498 -27757790 + L1PA13 LINE L1 443 885 -5902 24 32 0 0 chr10 117831711 117831742 -27757546 + AT_rich Low_complexity Low_complexity 1 31 0 296 241 184 0 chr10 117832576 117832717 -27756571 - L2 LINE L2 -12 3301 3135 22 0 0 0 chr10 117832808 117832830 -27756458 + AT_rich Low_complexity Low_complexity 1 22 0 530 297 106 26 chr10 117833135 117833681 -27755607 + L1MEc LINE L1 676 1265 -5131 313 264 74 83 chr10 117833730 117833781 -27755507 + L1MEc LINE L1 1341 1391 -4824 1840 150 10 10 chr10 117833781 117834102 -27755186 + AluSx SINE Alu 1 312 0 313 264 74 83 chr10 117834102 117834266 -27755022 + L1MEc LINE L1 1391 1554 -4661 28 29 0 0 chr10 117836308 117836343 -27752945 + AT_rich Low_complexity Low_complexity 1 35 0 282 300 0 0 chr10 117836343 117836433 -27752855 - L1 LINE L1 -2368 3778 3689 383 261 64 64 chr10 117837722 117837879 -27751409 + MIR SINE MIR 76 232 -30 192 250 94 0 chr10 117838155 117838219 -27751069 + L2 LINE L2 3143 3212 -60 287 181 43 21 chr10 117839768 117839862 -27749426 + L1ME LINE L1 735 830 -5240 1056 197 14 41 chr10 117840007 117840225 -27749063 - AluJo SINE Alu -100 212 1 243 195 12 134 chr10 117840814 117840896 -27748392 - L2 LINE L2 -1 3271 3200 1610 164 58 39 chr10 117841054 117841384 -27747904 - MER1B DNA MER1_type 0 337 2 548 332 20 15 chr10 117843735 117843934 -27745354 + MIR SINE MIR 2 201 -61 903 223 9 23 chr10 117844193 117844413 -27744875 + L1MA10 LINE L1 6089 6305 -29 1772 282 91 21 chr10 117844482 117846188 -27743100 - L1ME3 LINE L1 -9 6547 4717 366 270 9 0 chr10 117846385 117846500 -27742788 - L1ME3 LINE L1 -2160 4380 4265 22 0 0 0 chr10 117846726 117846748 -27742540 + AT_rich Low_complexity Low_complexity 1 22 0 427 275 18 18 chr10 117846870 117847037 -27742251 - L1ME3 LINE L1 -3134 3406 3240 361 194 15 22 chr10 117847261 117847395 -27741893 + GA-rich Low_complexity Low_complexity 3 135 0 290 255 11 58 chr10 117847418 117847606 -27741682 + GA-rich Low_complexity Low_complexity 2 180 0 988 221 67 16 chr10 117847661 117847973 -27741315 + L1M4 LINE L1 2815 3142 -3004 599 360 56 34 chr10 117847990 117848398 -27740890 + L1PA13 LINE L1 788 1204 -6370 411 293 0 0 chr10 117848621 117848720 -27740568 + L1PA13 LINE L1 2085 2183 -5398 4075 258 34 22 chr10 117849021 117850434 -27738854 + L1PA13 LINE L1 2869 4298 -3286 1044 298 27 36 chr10 117850653 117851129 -27738159 + L2 LINE L2 2124 2595 -719 475 326 35 19 chr10 117851360 117851679 -27737609 + L1M4 LINE L1 4457 4780 -1366 401 108 128 98 chr10 117851732 117851834 -27737454 - L1MD1 LINE L1 -11 6231 6127 542 261 103 39 chr10 117851840 117851901 -27737387 - L1ME3 LINE L1 -3545 2995 2939 2233 110 39 39 chr10 117851901 117852265 -27737023 + THE1B LTR MaLR 1 364 0 542 261 103 39 chr10 117852265 117852563 -27736725 - L1ME3 LINE L1 -3601 2939 2613 1615 211 60 13 chr10 117852574 117853028 -27736260 - L1ME3 LINE L1 -3984 2556 2082 3270 250 42 64 chr10 117853035 117854602 -27734686 - L1ME3 LINE L1 -4528 2012 185 13950 225 23 12 chr10 117854753 117858323 -27730965 + L1P LINE L1 1761 5373 -783 3824 127 8 25 chr10 117858753 117859578 -27729710 - L1MA2 LINE L1 -297 6007 5226 298 256 65 48 chr10 117859594 117859762 -27729526 + L1MEc LINE L1 2157 2327 -4069 * 3726 190 24 75 chr10 117859732 117860653 -27728635 + L1MC2 LINE L1 5475 6344 -69 2330 176 20 22 chr10 117860653 117861113 -27728175 + LOR1b LTR ERV1 1 459 -2 3726 190 24 75 chr10 117861113 117861173 -27728115 + L1MC2 LINE L1 6344 6406 -7 1284 271 56 31 chr10 117861173 117861694 -27727594 + L1MEc LINE L1 2272 2805 -3410 296 267 76 19 chr10 117861694 117861799 -27727489 - MER58B DNA MER1_type 0 341 231 1506 275 28 33 chr10 117861813 117862383 -27726905 + L1ME1 LINE L1 5570 6136 -30 7012 126 22 3 chr10 117863952 117865009 -27724279 + THE1-int LTR MaLR 491 1567 -13 265 322 33 0 chr10 117866741 117866831 -27722457 + L1MCc LINE L1 1088 1180 -5243 1237 175 0 5 chr10 117866833 117867033 -27722255 - AluJb SINE Alu -107 205 7 557 264 86 56 chr10 117867038 117867746 -27721542 + L1MCc LINE L1 1288 2038 -4900 298 287 40 0 chr10 117867789 117867890 -27721398 + L1MCc LINE L1 2549 2653 -4469 2274 80 0 14 chr10 117867895 117868184 -27721104 + AluY SINE Alu 1 285 -26 989 254 42 61 chr10 117868597 117869006 -27720282 + MER93a LTR ERV1 2 402 0 205 105 53 0 chr10 117869264 117869302 -27719986 + (TAGA)n Simple_repeat Simple_repeat 4 43 0 217 315 43 11 chr10 117869422 117869514 -27719774 - MIR SINE MIR -70 192 98 230 143 0 0 chr10 117869904 117869946 -27719342 + LTR5 LTR ERVK 758 799 -170 24 0 0 0 chr10 117869946 117869970 -27719318 + AT_rich Low_complexity Low_complexity 1 24 0 267 280 60 10 chr10 117870661 117870761 -27718527 + L1ME LINE L1 5624 5728 -434 335 250 69 123 chr10 117871139 117871343 -27717945 - MLT1K LTR MaLR -45 543 351 417 129 0 0 chr10 117872004 117872074 -27717214 + (TG)n Simple_repeat Simple_repeat 1 70 0 364 311 98 34 chr10 117872190 117872572 -27716716 - MLT1H LTR MaLR -191 404 1 231 371 0 21 chr10 117873203 117873343 -27715945 - MLT1K LTR MaLR -310 278 142 302 315 77 0 chr10 117873418 117873548 -27715740 - MIR SINE MIR -77 185 46 25 31 0 0 chr10 117874338 117874370 -27714918 + AT_rich Low_complexity Low_complexity 1 32 0 430 86 0 29 chr10 117875540 117875610 -27713678 - MADE1 DNA Mariner 0 80 13 229 136 30 30 chr10 117875610 117875676 -27713612 + (TATAA)n Simple_repeat Simple_repeat 2 67 0 211 330 37 28 chr10 117875729 117875838 -27713450 - MIR SINE MIR -62 146 37 270 0 0 0 chr10 117876570 117876600 -27712688 + (TG)n Simple_repeat Simple_repeat 1 30 0 198 191 0 0 chr10 117877078 117877120 -27712168 + (TG)n Simple_repeat Simple_repeat 1 42 0 228 245 139 40 chr10 117877609 117877760 -27711528 + MER113 DNA MER1_type? 17 182 -339 1635 154 77 0 chr10 117877899 117878171 -27711117 + AluSx SINE Alu 2 294 -18 297 0 0 0 chr10 117878319 117878352 -27710936 + (TG)n Simple_repeat Simple_repeat 1 33 0 380 262 0 134 chr10 117878524 117878639 -27710649 - L2 LINE L2 -1 3271 3179 2380 189 37 2 chr10 117878639 117879158 -27710130 - L1MB4 LINE L1 -5 6175 5639 380 262 0 134 chr10 117879158 117879191 -27710097 - L2 LINE L2 -93 3179 3143 323 299 213 34 chr10 117879492 117879663 -27709625 + L2 LINE L2 2971 3110 -203 240 100 0 0 chr10 117879663 117879703 -27709585 + (TG)n Simple_repeat Simple_repeat 2 41 0 323 299 213 34 chr10 117879703 117879822 -27709466 + L2 LINE L2 3110 3313 0 223 307 27 0 chr10 117879841 117879916 -27709372 + MIR SINE MIR 61 137 -125 438 345 45 11 chr10 117881221 117881398 -27707890 - MER5A DNA MER1_type 0 189 7 306 0 0 0 chr10 117882295 117882329 -27706959 + (TG)n Simple_repeat Simple_repeat 2 35 0 248 265 34 94 chr10 117883705 117883822 -27705466 - MER5A DNA MER1_type -7 182 73 468 269 48 122 chr10 117883997 117884268 -27705020 - MIR SINE MIR -7 255 5 230 200 0 0 chr10 117884269 117884309 -27704979 + MER5A DNA MER1_type 150 189 0 304 317 172 20 chr10 117884415 117884822 -27704466 + L2 LINE L2 2249 2717 -597 281 175 35 0 chr10 117885021 117885078 -27704210 + MIR SINE MIR 91 149 -113 380 277 77 0 chr10 117886222 117886352 -27702936 + MIR SINE MIR 47 186 -76 283 301 0 27 chr10 117886370 117886443 -27702845 - MIR SINE MIR -189 73 3 968 88 0 0 chr10 117886912 117887089 -27702199 + AluY SINE Alu 157 333 0 211 316 154 0 chr10 117887314 117887431 -27701857 - L2 LINE L2 -1 3271 3137 297 289 116 0 chr10 117887742 117887863 -27701425 + MIR SINE MIR 3 137 -125 233 218 0 18 chr10 117887880 117887935 -27701353 + CT-rich Low_complexity Low_complexity 3 56 0 216 0 0 0 chr10 117888155 117888179 -27701109 + (GA)n Simple_repeat Simple_repeat 1 24 0 329 257 29 9 chr10 117888199 117888304 -27700984 + L1MC4 LINE L1 7931 8037 -5 288 264 23 92 chr10 117888432 117888606 -27700682 + L2 LINE L2 3150 3311 -2 21 36 0 0 chr10 117888725 117888753 -27700535 + AT_rich Low_complexity Low_complexity 1 28 0 1332 194 63 73 chr10 117888946 117889328 -27699960 + MLT1B LTR MaLR 13 390 0 285 175 18 18 chr10 117889375 117889432 -27699856 + MIR SINE MIR 93 149 -113 249 326 31 39 chr10 117890335 117890464 -27698824 + MIR SINE MIR 133 260 -2 180 319 167 36 chr10 117890785 117890923 -27698365 - L2 LINE L2 -193 3079 2924 358 311 153 24 chr10 117890932 117891186 -27698102 + L2 LINE L2 2969 3255 -58 5500 181 25 15 chr10 117891296 117891951 -27697337 + L1MC1 LINE L1 5088 5735 -598 2601 168 103 33 chr10 117891951 117892522 -27696766 + LTR36 LTR ERV1 1 611 0 5500 181 25 15 chr10 117892522 117892802 -27696486 + L1MC1 LINE L1 5735 6011 -322 4401 121 44 44 chr10 117892802 117893581 -27695707 - MER4E LTR ERV1 0 779 1 5500 181 25 15 chr10 117893581 117893618 -27695670 + L1MC1 LINE L1 6011 6046 -287 1779 160 38 27 chr10 117893618 117893987 -27695301 + THE1C LTR MaLR 1 373 -2 5500 181 25 15 chr10 117893987 117894244 -27695044 + L1MC1 LINE L1 6046 6333 0 606 306 60 31 chr10 117894881 117895815 -27693473 - L1ME2 LINE L1 -214 5948 4981 424 297 21 36 chr10 117896106 117896298 -27692990 - Charlie8 DNA MER1_type -2157 260 72 464 229 29 58 chr10 117896340 117896542 -27692746 - MER106B DNA MER1_type 0 236 32 343 318 42 42 chr10 117897312 117897504 -27691784 + MIR SINE MIR 7 198 -64 226 257 27 40 chr10 117898474 117898548 -27690740 - MER5B DNA MER1_type -85 93 21 795 149 62 6 chr10 117899032 117899193 -27690095 + L1MA9 LINE L1 5911 6080 -232 255 182 182 0 chr10 117899210 117899287 -27690001 + L1MA9 LINE L1 6197 6287 -25 214 322 0 0 chr10 117899715 117899774 -27689514 + L2 LINE L2 3250 3308 -5 443 349 54 12 chr10 117900140 117900381 -27688907 - MIR SINE MIR 0 262 12 245 395 99 12 chr10 117900657 117900819 -27688469 - MIR3 SINE MIR -12 196 21 227 321 0 19 chr10 117901785 117901891 -27687397 + L1MCc LINE L1 110 213 -6210 546 271 112 47 chr10 117902196 117902629 -27686659 + MLT1D LTR MaLR 1 505 0 972 300 66 20 chr10 117902772 117903551 -27685737 + L1MCc LINE L1 826 1642 -4903 1776 126 110 16 chr10 117903567 117903885 -27685403 - LTR9 LTR ERV1 -264 348 1 564 274 59 11 chr10 117903895 117904162 -27685126 + L1MCc LINE L1 2378 2754 -4245 497 300 63 14 chr10 117904213 117904659 -27684629 + L1MCc LINE L1 2626 3093 -4029 * 1298 210 29 46 chr10 117904658 117905094 -27684194 + L1MC4a LINE L1 5222 5646 -520 1575 154 11 25 chr10 117905097 117905447 -27683841 - MER4A LTR ERV1 0 664 261 495 110 49 0 chr10 117905468 117905550 -27683738 - MER4A LTR ERV1 -578 86 1 342 0 0 0 chr10 117905583 117905621 -27683667 + (CA)n Simple_repeat Simple_repeat 2 39 0 1258 258 125 63 chr10 117905626 117906488 -27682800 + L1MC4a LINE L1 5689 6654 -1154 201 39 0 0 chr10 117906488 117906514 -27682774 + (TG)n Simple_repeat Simple_repeat 1 26 0 1258 258 125 63 chr10 117906514 117907143 -27682145 + L1MC4a LINE L1 6654 7243 -565 1094 257 56 5 chr10 117907220 117907597 -27681691 + L1MD3 LINE L1 7590 7985 -10 229 272 0 48 chr10 117907676 117907779 -27681509 + (TAGG)n Simple_repeat Simple_repeat 2 99 0 264 304 13 0 chr10 117908195 117908274 -27681014 + GA-rich Low_complexity Low_complexity 3 82 0 4348 184 30 24 chr10 117908473 117909579 -27679709 - L1MA9 LINE L1 -6 6306 5184 2795 209 23 19 chr10 117909607 117910347 -27678941 + L1 LINE L1 3260 4002 -2144 21 0 0 0 chr10 117910352 117910373 -27678915 + AT_rich Low_complexity Low_complexity 1 21 0 387 0 0 0 chr10 117912430 117912473 -27676815 + (CA)n Simple_repeat Simple_repeat 2 44 0 435 78 0 0 chr10 117912473 117912537 -27676751 + (GA)n Simple_repeat Simple_repeat 1 64 0 321 282 10 48 chr10 117912892 117912995 -27676293 - MIR SINE MIR -147 115 17 1560 209 0 7 chr10 117913786 117914095 -27675193 + AluJb SINE Alu 2 308 0 226 344 158 37 chr10 117914713 117914928 -27674360 + MIR SINE MIR 19 259 -3 327 324 20 0 chr10 117916696 117916798 -27672490 + MIR SINE MIR 86 189 -73 324 246 99 42 chr10 117916975 117917117 -27672171 + L1MC5 LINE L1 7786 7935 -26 347 266 45 20 chr10 117917951 117918147 -27671141 - MLT1E LTR MaLR 0 593 311 203 225 0 0 chr10 117918330 117918370 -27670918 + L2 LINE L2 2985 3024 -248 539 103 0 11 chr10 117918377 117918464 -27670824 - L1PA8A LINE L1 -2504 3642 3557 * 10363 105 11 6 chr10 117918452 117920750 -27668538 + L1PA8A LINE L1 3651 5958 -173 207 139 0 0 chr10 117922599 117922635 -27666653 + (CGGGG)n Simple_repeat Simple_repeat 5 40 0 206 297 69 0 chr10 117923008 117923097 -27666191 - MIR SINE MIR -67 141 39 334 204 176 28 chr10 117923226 117923334 -27665954 - MIR SINE MIR -62 146 23 1205 51 0 0 chr10 117923446 117923583 -27665705 + AluY SINE Alu 1 137 -174 943 181 111 14 chr10 117927109 117927325 -27661963 + MIR SINE MIR 20 256 -6 2150 95 10 7 chr10 117928897 117929191 -27660097 - AluSp SINE Alu -18 295 1 1806 148 10 20 chr10 117930195 117930499 -27658789 - AluSg SINE Alu -9 301 1 236 399 46 6 chr10 117931150 117931323 -27657965 - L2 LINE L2 -541 2773 2594 1010 128 26 0 chr10 117931344 117931500 -27657788 - THE1C LTR MaLR -215 160 1 9970 115 47 9 chr10 117931500 117933022 -27656266 - THE1C-int LTR MaLR 0 1580 1 1933 131 82 23 chr10 117933024 117933376 -27655912 - THE1C LTR MaLR -2 373 1 239 122 20 0 chr10 117933630 117933679 -27655609 + (TA)n Simple_repeat Simple_repeat 2 51 0 479 288 109 0 chr10 117935110 117935294 -27653994 + MIR3 SINE MIR 2 205 -3 471 301 90 7 chr10 117935523 117935738 -27653550 + MIR SINE MIR 16 243 -19 22 0 0 0 chr10 117936084 117936106 -27653182 + AT_rich Low_complexity Low_complexity 1 22 0 1714 55 0 18 chr10 117936122 117936339 -27652949 + AluY SINE Alu 99 311 0 21 0 0 0 chr10 117936827 117936848 -27652440 + AT_rich Low_complexity Low_complexity 1 21 0 305 217 0 0 chr10 117937164 117937224 -27652064 - Tigger5 DNA MER2_type 0 2323 2264 478 204 0 0 chr10 117937246 117937334 -27651954 + Tigger5 DNA MER2_type 1 88 -2235 308 148 0 19 chr10 117937336 117937390 -27651898 - Tigger5 DNA MER2_type -6 2317 2265 237 169 0 68 chr10 117937372 117937431 -27651857 - Tigger5 DNA MER2_type -2268 55 1 * 251 343 10 0 chr10 117937730 117937829 -27651459 - L2 LINE L2 -2 3311 3212 2301 92 13 3 chr10 117937878 117938182 -27651106 + AluY SINE Alu 1 307 -4 259 309 24 12 chr10 117938231 117938315 -27650973 + MIR SINE MIR 46 130 -132 292 314 20 0 chr10 117939398 117939500 -27649788 + MER5A DNA MER1_type 7 110 -79 511 301 33 0 chr10 117939563 117939716 -27649572 - MER5B DNA MER1_type -1 177 20 444 302 66 49 chr10 117939756 117940163 -27649125 + MLT1K LTR MaLR 169 582 -6 769 261 114 12 chr10 117942063 117942388 -27646900 + L1ME3A LINE L1 5734 6091 -79 3293 199 26 23 chr10 117942636 117943252 -27646036 - L1MB1 LINE L1 -1 6167 5547 1151 238 99 22 chr10 117943252 117943617 -27645671 + MSTD LTR MaLR 4 396 0 3293 199 26 23 chr10 117943617 117943773 -27645515 - L1MB1 LINE L1 -621 5547 5393 279 0 0 0 chr10 117943776 117943807 -27645481 + (CA)n Simple_repeat Simple_repeat 2 32 0 2166 96 0 4 chr10 117944799 117945079 -27644209 - AluSx SINE Alu -33 279 1 2294 111 3 0 chr10 117945854 117946160 -27643128 + AluSg SINE Alu 1 307 -3 185 405 45 9 chr10 117946320 117946431 -27642857 - MIR SINE MIR -78 130 16 1835 166 3 3 chr10 117946684 117946991 -27642297 + AluJb SINE Alu 3 309 -3 208 255 78 0 chr10 117947009 117947060 -27642228 - L2 LINE L2 -5 3267 3213 206 366 75 0 chr10 117948438 117948531 -27640757 - MIR3 SINE MIR -96 112 13 978 213 118 32 chr10 117949629 117949944 -27639344 - MER2 DNA MER2_type 0 344 3 5151 168 41 18 chr10 117950466 117951576 -27637712 - L1MC1 LINE L1 0 6333 5195 322 354 21 35 chr10 117951629 117951773 -27637515 - MIR SINE MIR -114 148 7 547 310 6 35 chr10 117952035 117952206 -27637082 - MER5A DNA MER1_type 0 189 24 7670 116 80 73 chr10 117953374 117955091 -27634197 - pTR5 LTR ERV1 0 2438 382 1916 191 64 7 chr10 117955251 117955660 -27633628 - MSTB1 LTR MaLR 0 432 1 1653 199 3 3 chr10 117955688 117955985 -27633303 - AluJb SINE Alu -15 297 1 800 142 0 0 chr10 117956597 117956731 -27632557 + MLT2B2 LTR ERVL 3 136 -379 1286 225 175 0 chr10 117956827 117957112 -27632176 + MLT2B1 LTR ERVL 145 479 -41 2723 74 3 0 chr10 117957157 117957520 -27631768 + MLT2A1 LTR ERVL 3 366 -78 1261 191 85 4 chr10 117957551 117957823 -27631465 + MSTA LTR MaLR 135 428 0 1235 237 48 34 chr10 117957827 117958185 -27631103 + MLT1A1 LTR MaLR 3 365 0 201 224 0 0 chr10 117958656 117958714 -27630574 + CT-rich Low_complexity Low_complexity 2 59 0 1196 199 186 100 chr10 117959686 117960284 -27629004 - MLT1E3 LTR MaLR -5 619 1 542 299 22 0 chr10 117962487 117962624 -27626664 + MIR SINE MIR 50 189 -73 369 0 0 0 chr10 117963091 117963132 -27626156 + (TG)n Simple_repeat Simple_repeat 2 42 0 290 287 11 64 chr10 117963202 117963296 -27625992 + MIR SINE MIR 50 138 -70 474 231 131 19 chr10 117963332 117963492 -27625796 + MER5B DNA MER1_type 1 178 0 194 171 24 0 chr10 117963752 117963793 -27625495 - L2 LINE L2 -1 3312 3271 356 322 18 72 chr10 117964457 117964731 -27624557 + L2 LINE L2 2737 2992 -321 2302 98 0 7 chr10 117964731 117965036 -27624252 - AluSx SINE Alu -9 303 1 356 322 18 72 chr10 117965036 117965101 -27624187 + L2 LINE L2 2992 3059 -254 240 35 0 0 chr10 117965362 117965391 -27623897 + (TAA)n Simple_repeat Simple_repeat 1 29 0 2553 103 10 0 chr10 117966061 117966450 -27622838 + L1P5 LINE L1 5390 5782 -369 198 0 0 0 chr10 117966457 117966479 -27622809 + (TA)n Simple_repeat Simple_repeat 1 22 0 303 208 0 119 chr10 117966491 117966592 -27622696 + L1MC4 LINE L1 6615 6703 -1339 300 240 0 62 chr10 117966564 117966660 -27622628 - L1MC4 LINE L1 -1339 6703 6614 * 261 0 0 0 chr10 117966673 117966702 -27622586 + (TA)n Simple_repeat Simple_repeat 1 29 0 2490 111 3 3 chr10 117966702 117967070 -27622218 + L1PB1 LINE L1 5782 6149 -2 2510 56 0 3 chr10 117967124 117967430 -27621858 + AluY SINE Alu 1 305 -6 445 320 107 0 chr10 117967575 117967725 -27621563 + MIR3 SINE MIR 31 196 -12 201 313 75 15 chr10 117967993 117968060 -27621228 - L3 LINE CR1 -8 1569 1499 207 0 0 0 chr10 117968723 117968746 -27620542 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1640 118 6 63 chr10 117968746 117969061 -27620227 - MER51A LTR ERV1 -70 564 268 212 340 0 0 chr10 117970337 117970437 -27618851 + T-rich Low_complexity Low_complexity 1 100 0 695 203 8 0 chr10 117970617 117970740 -27618548 + FLAM_A SINE Alu 1 124 -9 33 25 0 0 chr10 117970743 117970783 -27618505 + AT_rich Low_complexity Low_complexity 1 40 0 243 0 0 0 chr10 117972366 117972393 -27616895 + (TG)n Simple_repeat Simple_repeat 2 28 0 230 387 40 0 chr10 117972434 117972558 -27616730 - MIR SINE MIR -126 136 8 1741 217 21 0 chr10 117972919 117973293 -27615995 + MLT1B LTR MaLR 9 390 0 187 313 36 24 chr10 117974747 117974830 -27614458 - MIR SINE MIR -120 142 59 218 207 17 0 chr10 117976129 117976187 -27613101 + (TA)n Simple_repeat Simple_repeat 2 60 0 472 251 52 77 chr10 117976592 117977107 -27612181 - L1ME LINE L1 -509 6472 5970 599 261 39 72 chr10 117977115 117977215 -27612073 - L1ME1 LINE L1 -5 6161 6059 2217 88 0 7 chr10 117977215 117977521 -27611767 - AluY SINE Alu -7 304 1 599 261 39 72 chr10 117977521 117977753 -27611535 - L1ME1 LINE L1 -107 6059 5840 330 262 39 0 chr10 117977752 117977855 -27611433 - L1ME LINE L1 -2088 4869 4763 * 1315 238 59 40 chr10 117977868 117978352 -27610936 - L1ME1 LINE L1 -352 5814 5322 270 0 0 0 chr10 117978352 117978382 -27610906 + (TA)n Simple_repeat Simple_repeat 2 31 0 1315 238 59 40 chr10 117978382 117978628 -27610660 - L1ME1 LINE L1 -844 5322 5082 1444 257 105 41 chr10 117978688 117978874 -27610414 - L1ME1 LINE L1 -1997 4149 3976 1799 92 0 0 chr10 117978874 117979124 -27610164 - L1PA13 LINE L1 -19 6144 5895 1444 257 105 41 chr10 117979124 117979286 -27610002 - L1ME1 LINE L1 -2170 3976 3826 2278 101 0 0 chr10 117979286 117979584 -27609704 + AluSg SINE Alu 1 298 -12 1444 257 105 41 chr10 117979584 117980328 -27608960 - L1ME1 LINE L1 -2320 3826 2986 600 241 21 21 chr10 117980342 117980533 -27608755 + L1M4 LINE L1 2564 2754 -3392 2735 254 76 14 chr10 117980536 117981883 -27607405 - L1M4 LINE L1 -2953 4004 2616 1538 128 20 4 chr10 117981885 117982135 -27607153 - L1PA14 LINE L1 -3 6158 5905 12963 171 10 8 chr10 117982153 117985242 -27604046 - L1PA12 LINE L1 -3426 4158 1059 4103 95 37 10 chr10 117985242 117985831 -27603457 + LTR14B LTR ERVK 4 608 0 12963 171 10 8 chr10 117985831 117985902 -27603386 - L1PA12 LINE L1 -6525 1059 990 832 244 134 38 chr10 117985897 117986684 -27602604 - L1M4 LINE L1 -4836 2019 1216 * 271 283 52 23 chr10 117986687 117986860 -27602428 - L1M4 LINE L1 -5083 1772 1595 1683 176 32 3 chr10 117987077 117987390 -27601898 + MER1B DNA MER1_type 18 339 0 321 278 108 40 chr10 117987513 117987689 -27601599 - L1M4 LINE L1 -6027 832 645 612 243 73 15 chr10 117989208 117989502 -27599786 - L1MC4a LINE L1 -70 7925 7439 330 275 115 86 chr10 117990290 117990559 -27598729 + L1M2 LINE L1 652 928 -5921 225 0 0 0 chr10 117991807 117991832 -27597456 + (T)n Simple_repeat Simple_repeat 1 25 0 217 250 160 60 chr10 117993154 117993254 -27596034 + MIR SINE MIR 37 146 -62 187 358 119 8 chr10 117994488 117994622 -27594666 - MIR SINE MIR -50 212 64 2163 112 14 7 chr10 117995074 117995369 -27593919 - AluSc SINE Alu -12 297 1 2012 148 0 10 chr10 117995989 117996294 -27592994 + AluSx SINE Alu 1 302 -10 214 265 44 0 chr10 117996429 117996497 -27592791 - L2 LINE L2 -14 3258 3188 423 237 71 71 chr10 117998300 117998469 -27590819 - MIR SINE MIR -40 222 54 226 288 15 30 chr10 117999221 117999287 -27590001 + MER5A DNA MER1_type 113 188 -1 524 303 105 21 chr10 117999504 117999742 -27589546 + MIR SINE MIR 5 262 0 23 0 0 0 chr10 117999798 117999821 -27589467 + AT_rich Low_complexity Low_complexity 1 23 0 206 234 0 0 chr10 118000726 118000773 -27588515 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 238 230 30 40 chr10 118001001 118001101 -27588187 + (CAGAGA)n Simple_repeat Simple_repeat 2 100 0 180 111 0 0 chr10 118001365 118001392 -27587896 + (TTTC)n Simple_repeat Simple_repeat 3 29 0 261 0 0 0 chr10 118001576 118001605 -27587683 + (A)n Simple_repeat Simple_repeat 1 29 0 1146 204 4 18 chr10 118001933 118002159 -27587129 + MER58A DNA MER1_type 1 223 -1 1673 210 8 37 chr10 118002816 118003192 -27586096 - MLT1A1 LTR MaLR 0 365 1 672 292 49 9 chr10 118005546 118005772 -27583516 + MIR SINE MIR 23 257 -5 338 279 25 33 chr10 118006568 118006690 -27582598 + MIR SINE MIR 33 153 -109 22 35 0 0 chr10 118007353 118007382 -27581906 + AT_rich Low_complexity Low_complexity 1 29 0 234 319 89 19 chr10 118007435 118007592 -27581696 - L1ME LINE L1 -200 5921 5754 893 235 98 64 chr10 118009314 118009992 -27579296 + L1MA9 LINE L1 2785 3436 -4129 903 245 0 0 chr10 118009992 118010176 -27579112 + MSTB1 LTR MaLR 1 184 -242 218 213 0 0 chr10 118010176 118010223 -27579065 + T-rich Low_complexity Low_complexity 1 47 0 1542 153 32 0 chr10 118010708 118010957 -27578331 + MSTB1 LTR MaLR 176 432 0 1221 200 69 67 chr10 118010957 118011463 -27577825 + L1MA9 LINE L1 3432 3951 -3614 9309 217 54 19 chr10 118011472 118014953 -27574335 + L1MA9 LINE L1 4117 7726 -5 1484 188 7 0 chr10 118016663 118016935 -27572353 - AluJb SINE Alu -38 274 1 302 225 158 7 chr10 118017017 118017157 -27572131 - MER34 LTR ERV1 -21 734 405 605 244 131 0 chr10 118017340 118017508 -27571780 - MER34C LTR ERV1 -373 212 23 1869 217 80 48 chr10 118017627 118018230 -27571058 - MER34C-int LTR ERV1 -202 4734 4113 11482 175 42 15 chr10 118018258 118020548 -27568740 - L1MA3 LINE L1 0 6305 3875 2155 146 39 3 chr10 118020548 118020910 -27568378 - THE1C LTR MaLR 0 375 1 11482 175 42 15 chr10 118020910 118022291 -27566997 - L1MA3 LINE L1 -2430 3875 2533 9373 116 1 2 chr10 118022444 118023758 -27565530 - THE1A-int LTR MaLR -268 1312 1 2186 125 14 8 chr10 118023758 118024111 -27565177 - THE1A LTR MaLR 0 355 1 1232 199 3 70 chr10 118024247 118024572 -27564716 - AluJo SINE Alu 0 305 1 4178 156 18 10 chr10 118024595 118025527 -27563761 - L1PA14 LINE L1 -683 5485 4549 3901 148 20 0 chr10 118025529 118026189 -27563099 + L1PA14 LINE L1 5489 6161 0 226 273 0 15 chr10 118026838 118026904 -27562384 + MIR SINE MIR 147 211 -51 22 56 0 0 chr10 118026938 118026974 -27562314 + AT_rich Low_complexity Low_complexity 1 36 0 2627 3 0 0 chr10 118027824 118028176 -27561112 - AluYa5 SINE Alu 0 352 1 24 0 0 0 chr10 118028266 118028290 -27560998 + AT_rich Low_complexity Low_complexity 1 24 0 206 378 13 39 chr10 118029116 118029272 -27560016 + L2 LINE L2 2753 2904 -410 304 397 16 0 chr10 118029473 118029599 -27559689 + L2 LINE L2 3143 3270 -2 252 83 14 69 chr10 118029882 118029954 -27559334 + (TA)n Simple_repeat Simple_repeat 2 69 0 1101 168 5 5 chr10 118030746 118030954 -27558334 - L1MA10 LINE L1 0 6334 6127 1285 241 103 50 chr10 118030954 118031410 -27557878 + MLT1E LTR MaLR 73 552 -41 188 0 74 0 chr10 118031781 118031808 -27557480 + (TAGA)n Simple_repeat Simple_repeat 1 29 0 21 36 0 0 chr10 118031843 118031871 -27557417 + AT_rich Low_complexity Low_complexity 1 28 0 704 44 35 18 chr10 118033041 118033154 -27556134 + (GAAA)n Simple_repeat Simple_repeat 2 116 0 264 164 18 18 chr10 118033619 118033674 -27555614 + MER69 DNA AcHobo 19 73 -2453 267 189 11 67 chr10 118033729 118033819 -27555469 + MER69 DNA AcHobo 2429 2513 -13 22 0 0 0 chr10 118034237 118034259 -27555029 + AT_rich Low_complexity Low_complexity 1 22 0 387 0 0 0 chr10 118035007 118035050 -27554238 + (TG)n Simple_repeat Simple_repeat 1 43 0 1477 132 25 30 chr10 118035891 118035993 -27553295 - AluSx SINE Alu -76 236 135 2104 123 0 23 chr10 118035993 118036302 -27552986 - AluSg SINE Alu -8 302 1 1477 132 25 30 chr10 118036302 118036434 -27552854 - AluSx SINE Alu -177 135 3 24 32 0 0 chr10 118036483 118036514 -27552774 + AT_rich Low_complexity Low_complexity 1 31 0 518 289 103 41 chr10 118036564 118037312 -27551976 + L1ME3A LINE L1 4071 4864 -1282 2496 115 29 0 chr10 118037341 118037724 -27551564 + L1PA16 LINE L1 5768 6161 -5 25 51 0 0 chr10 118037925 118037964 -27551324 + AT_rich Low_complexity Low_complexity 1 39 0 506 308 29 50 chr10 118038137 118038377 -27550911 + L1ME3A LINE L1 5619 5853 -317 403 269 96 32 chr10 118038392 118038611 -27550677 + L1ME3A LINE L1 5928 6160 -10 33 25 0 0 chr10 118039690 118039730 -27549558 + AT_rich Low_complexity Low_complexity 1 40 0 219 331 60 13 chr10 118039982 118040133 -27549155 + MIR SINE MIR 59 216 -46 286 200 0 0 chr10 118040460 118040515 -27548773 + Charlie1 DNA MER1_type 48 102 -2659 1145 279 62 35 chr10 118040525 118041442 -27547846 - L1ME LINE L1 -3211 3329 2393 24 77 0 0 chr10 118041457 118041509 -27547779 + AT_rich Low_complexity Low_complexity 1 52 0 256 265 74 55 chr10 118041555 118041971 -27547317 - L1ME LINE L1 -4369 2171 1747 432 291 89 39 chr10 118041976 118042357 -27546931 - L1ME LINE L1 -5049 1494 1095 267 113 52 35 chr10 118042391 118042506 -27546782 + (TATAA)n Simple_repeat Simple_repeat 1 117 0 245 169 28 70 chr10 118042728 118042799 -27546489 - L1ME LINE L1 -5589 941 874 345 257 22 88 chr10 118042870 118043006 -27546282 - L1ME LINE L1 -5633 897 771 925 185 6 14 chr10 118043146 118043459 -27545829 + MLT1A1 LTR MaLR 3 365 0 193 345 118 0 chr10 118044006 118044116 -27545172 - MIR SINE MIR -2 260 138 2295 108 0 0 chr10 118044226 118044532 -27544756 + AluSg SINE Alu 1 306 -4 21 89 0 0 chr10 118045261 118045317 -27543971 + AT_rich Low_complexity Low_complexity 1 56 0 1182 21 0 14 chr10 118045860 118046003 -27543285 + L1PA3 LINE L1 6012 6152 -3 16765 106 5 31 chr10 118046009 118048760 -27540528 + L1PA7 LINE L1 2827 5531 -623 2214 115 0 0 chr10 118048760 118049048 -27540240 - AluSx SINE Alu -24 288 1 16765 106 5 31 chr10 118049048 118049657 -27539631 + L1PA7 LINE L1 5531 6154 0 1782 248 38 13 chr10 118049773 118050108 -27539180 + L1 LINE L1 3289 3645 -2501 1724 186 0 0 chr10 118050108 118050398 -27538890 - AluSq SINE Alu -17 296 7 1782 248 38 13 chr10 118050398 118050615 -27538673 + L1 LINE L1 3645 3855 -2291 739 84 0 0 chr10 118050620 118050727 -27538561 + L1MA2 LINE L1 6008 6114 -190 297 0 0 0 chr10 118050827 118050860 -27538428 + (CAT)n Simple_repeat Simple_repeat 2 34 0 401 246 94 47 chr10 118050903 118051074 -27538214 - MIR SINE MIR -16 246 68 1204 181 82 0 chr10 118051116 118051348 -27537940 - MER45B DNA AcHobo -220 820 570 2265 97 0 44 chr10 118051348 118051667 -27537621 + AluSg SINE Alu 1 305 -5 280 298 9 35 chr10 118052044 118052158 -27537130 + L2 LINE L2 3161 3271 -42 693 0 0 0 chr10 118052531 118052608 -27536680 + (CATCT)n Simple_repeat Simple_repeat 3 79 0 412 288 6 56 chr10 118052672 118052832 -27536456 - MER76 LTR ERV -28 660 509 751 213 39 29 chr10 118052925 118053132 -27536156 + MLT1D LTR MaLR 297 505 0 270 324 22 107 chr10 118053133 118053534 -27535754 + L2 LINE L2 2563 2929 -385 721 251 20 15 chr10 118053677 118053872 -27535416 - L1M4 LINE L1 -5535 1007 812 289 265 194 47 chr10 118055656 118055826 -27533462 - LTR50 LTR ERVL -569 226 32 209 179 0 0 chr10 118056111 118056150 -27533138 + (TG)n Simple_repeat Simple_repeat 1 39 0 830 267 92 87 chr10 118058943 118059333 -27529955 + MLT1E LTR MaLR 117 527 -59 198 0 0 0 chr10 118059335 118059357 -27529931 + (TG)n Simple_repeat Simple_repeat 1 22 0 2580 183 84 18 chr10 118059367 118059462 -27529826 - L1MB3 LINE L1 -8 6175 6088 2099 145 42 25 chr10 118059462 118059820 -27529468 + THE1B LTR MaLR 1 364 0 2580 183 84 18 chr10 118059820 118060282 -27529006 - L1MB3 LINE L1 -95 6088 5581 270 182 0 18 chr10 118060283 118060338 -27528950 + MLT1E LTR MaLR 483 536 -6 222 276 17 17 chr10 118060382 118060440 -27528848 - L2 LINE L2 -78 3194 3137 238 50 50 0 chr10 118060844 118060884 -27528404 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 1631 153 87 0 chr10 118060902 118061177 -27528111 - AluSx SINE Alu -13 299 1 1784 118 93 4 chr10 118061642 118061921 -27527367 + AluSx SINE Alu 1 304 -8 283 250 15 0 chr10 118063668 118063800 -27525488 + (TA)n Simple_repeat Simple_repeat 2 135 0 312 210 0 121 chr10 118063800 118063924 -27525364 + L1MC4 LINE L1 6614 6722 -1320 282 56 0 0 chr10 118063972 118064008 -27525280 + (TA)n Simple_repeat Simple_repeat 2 37 0 220 200 0 0 chr10 118064488 118064533 -27524755 + (CA)n Simple_repeat Simple_repeat 2 46 0 4484 30 0 0 chr10 118066149 118066685 -27522603 - L1PA2 LINE L1 -1399 4747 4212 7686 22 0 1 chr10 118066685 118068090 -27521198 + L1PA2 LINE L1 4748 6151 -4 21 0 0 0 chr10 118068092 118068113 -27521175 + AT_rich Low_complexity Low_complexity 1 21 0 183 330 0 34 chr10 118068360 118068448 -27520840 - MER5A DNA MER1_type 0 189 105 282 295 39 31 chr10 118069316 118069445 -27519843 + MIR3 SINE MIR 6 135 -73 377 364 21 0 chr10 118069462 118069602 -27519686 - MIR SINE MIR -112 150 8 575 299 21 8 chr10 118070514 118070748 -27518540 - L1M4c LINE L1 -4588 2058 1822 1459 224 33 37 chr10 118070755 118070976 -27518312 - L1M4c LINE L1 -4988 1554 1334 1946 95 30 46 chr10 118070976 118071281 -27518007 - AluSq SINE Alu -13 300 1 1459 224 33 37 chr10 118071281 118071515 -27517773 - L1M4c LINE L1 -5208 1334 1101 2125 92 0 0 chr10 118073188 118073460 -27515828 - AluY SINE Alu -14 297 26 2156 165 57 20 chr10 118073623 118074030 -27515258 + MSTB LTR MaLR 1 422 -4 2174 228 33 0 chr10 118074061 118074491 -27514797 - MLT2B1 LTR ERVL -74 446 3 403 227 0 14 chr10 118075001 118075142 -27514146 + (TA)n Simple_repeat Simple_repeat 1 139 0 214 333 16 73 chr10 118075592 118075715 -27513573 + MIR SINE MIR 7 122 -140 294 259 74 44 chr10 118075716 118075851 -27513437 + MIR SINE MIR 88 226 -36 1987 154 0 0 chr10 118075867 118076215 -27513073 - AluSx SINE Alu 0 348 1 2089 114 7 0 chr10 118076276 118076607 -27512681 - AluSp SINE Alu 0 333 1 1814 131 78 9 chr10 118076629 118076949 -27512339 + MER61A LTR ERV1 1 342 -1 533 95 0 0 chr10 118077118 118077192 -27512096 + AluSp/q SINE Alu 220 293 -20 302 330 44 0 chr10 118079815 118079906 -27509382 - MIR3 SINE MIR -7 201 107 862 193 117 114 chr10 118080304 118080656 -27508632 - MLT1A1 LTR MaLR -12 353 1 304 93 0 0 chr10 118080669 118080710 -27508578 - MADE1 DNA Mariner -1 79 39 1733 200 47 17 chr10 118080710 118081143 -27508145 + LTR10B LTR ERV1 1 533 -14 421 202 98 62 chr10 118082260 118082453 -27506835 - L1M1 LINE L1 -3947 3618 3419 * 17738 199 42 6 chr10 118082427 118086480 -27502808 - L1 LINE L1 -3360 4205 11 5035 199 110 101 chr10 118086480 118087585 -27501703 - MER31-int LTR ERV1 -810 4126 3032 6709 142 12 0 chr10 118087585 118088285 -27501003 - L1PA10 LINE L1 -4 6164 5474 2019 115 0 26 chr10 118088285 118088597 -27500691 + AluSc SINE Alu 1 304 -5 6709 142 12 0 chr10 118088597 118089838 -27499450 - L1PA10 LINE L1 -694 5474 4220 5035 199 110 101 chr10 118089838 118091505 -27497783 - MER31-int LTR ERV1 -1904 3032 1330 352 147 121 108 chr10 118091539 118091696 -27497592 - MER31-int LTR ERV1 -3735 1201 1043 191 36 36 0 chr10 118091784 118091812 -27497476 + (TTCC)n Simple_repeat Simple_repeat 3 31 0 1736 258 101 62 chr10 118092976 118094196 -27495092 - MER31-int LTR ERV1 -5179 1152 48 2235 91 13 3 chr10 118094307 118094615 -27494673 - AluY SINE Alu 0 311 1 2192 127 0 0 chr10 118094617 118094925 -27494363 - AluSx SINE Alu -4 308 1 227 320 152 8 chr10 118095459 118095584 -27493704 - MER102a DNA MER1_type -22 308 166 749 250 78 81 chr10 118095642 118096054 -27493234 + MLT1H LTR MaLR 137 542 0 246 301 0 0 chr10 118096199 118096272 -27493016 - HsTC2 DNA Tc2 -1795 103 31 573 15 0 0 chr10 118096993 118097059 -27492229 + (TCTA)n Simple_repeat Simple_repeat 4 69 0 661 303 4 34 chr10 118097502 118097740 -27491548 - MIR SINE MIR -1 261 31 268 189 57 0 chr10 118098625 118098678 -27490610 - L1MA7 LINE L1 -88 6203 6148 233 204 41 20 chr10 118098711 118098809 -27490479 + (TATAA)n Simple_repeat Simple_repeat 3 102 0 203 243 7 0 chr10 118098813 118098965 -27490323 + (TA)n Simple_repeat Simple_repeat 2 154 0 367 182 47 0 chr10 118099021 118099191 -27490097 + (TA)n Simple_repeat Simple_repeat 2 179 0 405 0 0 0 chr10 118099433 118099478 -27489810 + (TG)n Simple_repeat Simple_repeat 2 46 0 22 70 0 0 chr10 118100658 118100701 -27488587 + AT_rich Low_complexity Low_complexity 1 43 0 684 266 41 35 chr10 118100751 118101067 -27488221 + L1ME3A LINE L1 5799 6116 -54 441 293 17 9 chr10 118101170 118101286 -27488002 - MIR3 SINE MIR -50 158 42 207 283 50 10 chr10 118101630 118101729 -27487559 + L2 LINE L2 1605 1707 -1607 225 360 0 0 chr10 118101935 118102024 -27487264 + L2 LINE L2 1820 1908 -1406 565 346 38 17 chr10 118102238 118102475 -27486813 + MIR SINE MIR 9 250 -12 707 249 7 100 chr10 118102646 118102935 -27486353 + MIR SINE MIR 1 262 0 189 343 152 25 chr10 118103064 118103262 -27486026 + L2 LINE L2 2563 2785 -529 271 279 144 10 chr10 118104268 118104372 -27484916 + MIR SINE MIR 19 136 -126 213 288 189 9 chr10 118104592 118104703 -27484585 + MIR SINE MIR 120 250 -12 211 331 104 19 chr10 118104750 118104904 -27484384 + L2 LINE L2 3128 3294 -19 291 336 57 14 chr10 118105417 118105557 -27483731 - L2 LINE L2 -5 3308 3163 200 339 106 22 chr10 118105593 118105773 -27483515 + L3 LINE CR1 1131 1325 -252 225 94 0 0 chr10 118105791 118105823 -27483465 + (TTCA)n Simple_repeat Simple_repeat 4 35 0 205 315 101 22 chr10 118105823 118105912 -27483376 - L2 LINE L2 -14 3299 3204 541 323 152 8 chr10 118106066 118106329 -27482959 - L2 LINE L2 0 3313 3013 276 319 111 15 chr10 118106495 118106630 -27482658 + LTR16A LTR ERVL 203 350 -100 1805 176 67 103 chr10 118106866 118107361 -27481927 + MER67D LTR ERV1 1 477 -37 28 61 0 0 chr10 118108791 118108840 -27480448 + AT_rich Low_complexity Low_complexity 1 49 0 221 250 15 59 chr10 118109066 118109134 -27480154 + MER5B DNA MER1_type 2 66 -112 536 106 58 0 chr10 118109264 118109368 -27479920 + L1MA9 LINE L1 6203 6312 0 355 312 19 38 chr10 118110300 118110457 -27478831 + MIR SINE MIR 92 245 -17 2197 113 0 0 chr10 118110945 118111245 -27478043 + AluSx SINE Alu 1 300 -12 22 35 0 0 chr10 118111924 118111953 -27477335 + AT_rich Low_complexity Low_complexity 1 29 0 284 390 63 19 chr10 118112321 118112480 -27476808 - MIR3 SINE MIR -18 190 25 3891 127 21 3 chr10 118113378 118114008 -27475280 - L1PA8A LINE L1 -2 6129 5489 4178 156 18 10 chr10 118114010 118114942 -27474346 + L1PA8A LINE L1 4549 5485 -683 1233 199 3 70 chr10 118114965 118115290 -27473998 + AluJo SINE Alu 1 305 0 2186 125 14 8 chr10 118115426 118115779 -27473509 + THE1A LTR MaLR 1 355 0 9677 116 1 2 chr10 118115779 118117133 -27472155 + THE1A-int LTR MaLR 1 1352 -228 243 61 0 0 chr10 118117222 118117255 -27472033 + (TG)n Simple_repeat Simple_repeat 2 34 0 457 260 119 31 chr10 118117369 118117596 -27471692 - LTR41 LTR ERVL -191 582 336 339 268 70 64 chr10 118117662 118117819 -27471469 - LTR41 LTR ERVL -596 177 20 244 348 22 0 chr10 118117899 118117991 -27471297 + L2 LINE L2 2313 2406 -908 258 333 0 0 chr10 118118112 118118181 -27471107 + L2 LINE L2 3203 3271 -1 252 290 32 21 chr10 118118187 118118280 -27471008 + MLT1D LTR MaLR 1 94 -411 225 284 147 39 chr10 118118280 118118382 -27470906 + MER77 LTR ERV1 54 166 -439 922 247 81 32 chr10 118118601 118118884 -27470404 + MER77 LTR ERV1 303 599 -6 347 262 49 16 chr10 118118959 118119081 -27470207 + MLT1D LTR MaLR 72 197 -308 304 316 131 18 chr10 118119952 118120120 -27469168 + MLT1J2 LTR MaLR 130 316 -134 608 360 29 0 chr10 118121552 118121794 -27467494 - MIR SINE MIR -12 250 2 3839 65 2 0 chr10 118121856 118122350 -27466938 - L1PA7 LINE L1 0 6154 5660 565 72 0 0 chr10 118122358 118122448 -27466840 + L1PA7 LINE L1 5597 5686 -470 21 36 0 0 chr10 118122559 118122587 -27466701 + AT_rich Low_complexity Low_complexity 1 28 0 899 240 10 5 chr10 118123269 118123469 -27465819 + LTR16B LTR ERVL 261 461 -3 1014 154 86 43 chr10 118123819 118124053 -27465235 + L1MA9 LINE L1 6064 6307 -5 2487 197 32 28 chr10 118124904 118125737 -27463551 - L1M3 LINE L1 -377 5794 4963 1245 251 35 26 chr10 118125754 118126101 -27463187 + MLT1A1 LTR MaLR 16 365 0 3300 242 60 21 chr10 118126102 118127184 -27462104 - L1M3 LINE L1 -1182 4964 3841 854 105 8 0 chr10 118127208 118127332 -27461956 - L1MA2 LINE L1 0 6304 6180 21 0 0 0 chr10 118128006 118128027 -27461261 + AT_rich Low_complexity Low_complexity 1 21 0 189 107 0 0 chr10 118128048 118128076 -27461212 + (TCTCC)n Simple_repeat Simple_repeat 5 32 0 471 35 0 0 chr10 118128078 118128135 -27461153 + (TTCC)n Simple_repeat Simple_repeat 2 58 0 194 354 47 39 chr10 118129069 118129196 -27460092 - L2 LINE L2 -18 3295 3168 1701 219 99 8 chr10 118129204 118129596 -27459692 - MLT1D LTR MaLR -77 428 1 1704 237 101 58 chr10 118130204 118130895 -27458393 - MER50 LTR ERV1 0 734 14 270 0 0 0 chr10 118130922 118130952 -27458336 + (CA)n Simple_repeat Simple_repeat 2 31 0 3349 178 78 46 chr10 118131432 118131958 -27457330 + L1MB3 LINE L1 5318 5882 -301 2177 125 0 6 chr10 118131958 118132270 -27457018 + AluSq SINE Alu 1 310 -3 3349 178 78 46 chr10 118132270 118132574 -27456714 + L1MB3 LINE L1 5882 6175 -8 2234 107 7 3 chr10 118133121 118133429 -27455859 - AluSc SINE Alu 0 309 1 2387 182 54 5 chr10 118133918 118134363 -27454925 - MLT1C LTR MaLR 0 467 1 27 29 0 0 chr10 118134565 118134599 -27454689 + AT_rich Low_complexity Low_complexity 1 34 0 272 177 25 38 chr10 118134624 118134703 -27454585 + (TTTA)n Simple_repeat Simple_repeat 4 81 0 439 326 52 21 chr10 118135678 118135871 -27453417 - MIR SINE MIR -5 257 59 182 286 18 0 chr10 118136226 118136282 -27453006 + MIR SINE MIR 157 213 -49 2241 116 5 67 chr10 118138590 118138793 -27450495 - THE1B LTR MaLR 0 364 195 2285 115 0 0 chr10 118138793 118139105 -27450183 - AluSx SINE Alu 0 312 1 2241 116 5 67 chr10 118139105 118139289 -27449999 - THE1B LTR MaLR -169 195 1 11540 98 4 1 chr10 118139289 118140864 -27448424 - THE1B-int LTR MaLR 0 1580 1 2128 160 5 32 chr10 118140864 118141238 -27448050 - THE1B LTR MaLR 0 364 1 2248 103 9 3 chr10 118141751 118142071 -27447217 - L1P3 LINE L1 -6139 322 1 10098 221 46 28 chr10 118142072 118143801 -27445487 - L1M4 LINE L1 -2842 3540 1845 207 0 0 0 chr10 118143801 118143824 -27445464 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 10098 221 46 28 chr10 118143824 118145352 -27443936 - L1M4 LINE L1 -4537 1845 210 1712 187 0 20 chr10 118145352 118145652 -27443636 + AluJb SINE Alu 19 312 0 10098 221 46 28 chr10 118145652 118145840 -27443448 - L1M4 LINE L1 -6172 210 27 577 294 80 26 chr10 118147084 118147389 -27441899 + L1ME3A LINE L1 5511 5829 -341 331 202 17 0 chr10 118147606 118147725 -27441563 + (TA)n Simple_repeat Simple_repeat 2 122 0 1952 145 0 101 chr10 118147807 118148063 -27441225 - MER7A DNA MER2_type -2693 345 141 1448 176 92 0 chr10 118148063 118148324 -27440964 + AluJb SINE Alu 4 288 -24 1952 145 0 101 chr10 118148324 118148453 -27440835 - MER7A DNA MER2_type -2897 141 1 206 225 12 88 chr10 118149676 118149756 -27439532 - MIR SINE MIR -85 177 104 275 222 14 0 chr10 118149850 118149922 -27439366 + (CA)n Simple_repeat Simple_repeat 1 73 0 393 279 58 0 chr10 118150260 118150414 -27438874 + MER103 DNA DNA 3 165 -1 319 282 0 13 chr10 118150464 118150542 -27438746 - MIR3 SINE MIR -51 157 81 230 224 30 0 chr10 118150713 118150780 -27438508 + (TA)n Simple_repeat Simple_repeat 2 70 0 190 325 12 38 chr10 118150993 118151073 -27438215 - MIR3 SINE MIR -3 205 128 11827 142 34 37 chr10 118151550 118154476 -27434812 + L1P3 LINE L1 114 3151 -3310 227 69 0 0 chr10 118154474 118154503 -27434785 + L1P LINE L1 829 857 -5289 * 5186 25 6 0 chr10 118154504 118155137 -27434151 + L1P LINE L1 4256 4892 -1254 5967 158 88 62 chr10 118155237 118157177 -27432111 - L1MCa LINE L1 -4443 1983 20 2712 180 56 29 chr10 118157365 118157988 -27431300 - L1MA8 LINE L1 -3 6288 5649 21 36 0 0 chr10 118158004 118158032 -27431256 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr10 118158392 118158420 -27430868 + AT_rich Low_complexity Low_complexity 1 28 0 2728 208 149 107 chr10 118158786 118160056 -27429232 + MER52A LTR ERV1 1 1323 -432 209 263 25 12 chr10 118160109 118160189 -27429099 + GA-rich Low_complexity Low_complexity 1 81 0 2037 234 45 17 chr10 118160778 118161806 -27427482 + L1MCa LINE L1 1970 3025 -3401 1995 110 0 0 chr10 118162272 118162545 -27426743 + AluSc SINE Alu 35 307 -2 375 303 81 33 chr10 118162913 118163184 -27426104 + HAL1 LINE L1 1327 1610 -897 271 259 24 12 chr10 118163209 118163294 -27425994 + CT-rich Low_complexity Low_complexity 3 88 0 231 88 0 0 chr10 118163339 118163373 -27425915 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 1199 305 66 48 chr10 118163669 118164272 -27425016 + MLT2E LTR ERVL 1 614 -14 268 386 13 0 chr10 118164744 118164897 -27424391 + ERVL LTR ERVL 538 692 -5072 528 274 54 27 chr10 118164950 118165173 -27424115 + ERVL LTR ERVL 813 1041 -4723 3076 312 39 16 chr10 118165608 118166822 -27422466 + ERVL LTR ERVL 4031 5271 -493 510 317 62 5 chr10 118167332 118167540 -27421748 - MIR SINE MIR -23 239 20 809 188 234 0 chr10 118167678 118167946 -27421342 - MER33 DNA MER1_type -1 323 1 1265 234 75 111 chr10 118168154 118168687 -27420601 - MER67C LTR ERV1 0 514 1 2191 66 0 33 chr10 118169662 118169994 -27419294 - AluY SINE Alu 0 311 1 22 0 0 0 chr10 118170292 118170314 -27418974 + AT_rich Low_complexity Low_complexity 1 22 0 2582 174 49 6 chr10 118170469 118170935 -27418353 - MER66B LTR ERV1 0 486 1 12187 147 41 26 chr10 118170935 118173030 -27416258 - MER66B-int LTR ERV1 0 6676 4551 674 192 0 41 chr10 118173039 118173185 -27416103 - MER4D LTR ERV1 -755 148 9 1302 201 11 22 chr10 118173204 118173472 -27415816 - LOR1-int LTR ERV1 -1027 7093 6829 8110 54 117 6 chr10 118173518 118174636 -27414652 + L1P LINE L1 3 1244 -4902 1426 249 78 32 chr10 118175152 118175626 -27413662 - MLT1D LTR MaLR -7 498 3 29 28 0 0 chr10 118175855 118175891 -27413397 + AT_rich Low_complexity Low_complexity 1 36 0 394 306 60 8 chr10 118176848 118176982 -27412306 - MIR SINE MIR -75 187 47 221 294 94 28 chr10 118177561 118177741 -27411547 - MIR SINE MIR -2 260 69 21 0 0 0 chr10 118180997 118181018 -27408270 + AT_rich Low_complexity Low_complexity 1 21 0 360 343 54 20 chr10 118181023 118181227 -27408061 + MIR SINE MIR 52 262 0 430 269 0 0 chr10 118181321 118181414 -27407874 - FLAM_A SINE Alu -49 93 1 749 160 154 0 chr10 118181804 118181960 -27407328 + MER67D LTR ERV1 12 191 -323 238 204 0 0 chr10 118182371 118182425 -27406863 + A-rich Low_complexity Low_complexity 4 57 0 577 363 70 52 chr10 118183549 118184109 -27405179 + MLT1K LTR MaLR 11 580 -8 305 350 31 31 chr10 118184131 118184325 -27404963 - LTR16C LTR ERVL 0 491 298 26 30 0 0 chr10 118187214 118187247 -27402041 + AT_rich Low_complexity Low_complexity 1 33 0 264 212 0 0 chr10 118187377 118187443 -27401845 + (TA)n Simple_repeat Simple_repeat 2 67 0 261 283 46 23 chr10 118187781 118188000 -27401288 + L1MEc LINE L1 916 1139 -5468 219 225 0 0 chr10 118188000 118188061 -27401227 + (TG)n Simple_repeat Simple_repeat 1 61 0 450 249 90 77 chr10 118188068 118188301 -27400987 + L1MEc LINE L1 964 1390 -5217 290 276 86 57 chr10 118188402 118188681 -27400607 + L1MEc LINE L1 1567 1853 -4754 409 237 74 0 chr10 118188803 118188848 -27400440 - L1MA10 LINE L1 -2 6332 6288 361 254 33 81 chr10 118188848 118189034 -27400254 - L1ME1 LINE L1 -46 6120 5941 6401 109 5 24 chr10 118189045 118190067 -27399221 - L1MA3 LINE L1 -7 6298 5296 5886 188 4 37 chr10 118190063 118190905 -27398383 - L1M1 LINE L1 -5345 2220 1422 * 1769 132 106 18 chr10 118190905 118191246 -27398042 - THE1C LTR MaLR -4 371 1 5886 188 4 37 chr10 118191246 118191515 -27397773 - L1M1 LINE L1 -6143 1422 1146 23813 26 3 0 chr10 118191616 118195085 -27394203 - L1PA2 LINE L1 -151 6004 2525 1264 33 0 0 chr10 118195232 118195384 -27393904 + L1PA2 LINE L1 6004 6155 0 2800 172 41 12 chr10 118195390 118195638 -27393650 - MER66B-int LTR ERV1 -2368 4308 4069 1930 145 0 16 chr10 118195638 118195941 -27393347 - AluSx SINE Alu -14 298 1 2800 172 41 12 chr10 118195941 118196251 -27393037 - MER66B-int LTR ERV1 -2607 4069 3734 1811 107 4 0 chr10 118196258 118196500 -27392788 - AluSp SINE Alu -18 295 53 6585 216 14 21 chr10 118196503 118197107 -27392181 - MER66B-int LTR ERV1 -3027 3649 3042 2093 141 33 30 chr10 118197107 118197470 -27391818 + THE1B LTR MaLR 1 364 0 6585 216 14 21 chr10 118197470 118198192 -27391096 - MER66B-int LTR ERV1 -3634 3042 2332 4154 185 85 19 chr10 118198210 118199047 -27390241 - MER66B-int LTR ERV1 -4575 2101 1210 710 271 13 0 chr10 118199138 118199293 -27389995 - MER66B-int LTR ERV1 -3573 3103 2947 3519 203 43 49 chr10 118199388 118200423 -27388865 - MER66B-int LTR ERV1 -5573 1103 1 2783 169 8 19 chr10 118200423 118200908 -27388380 - MER66B LTR ERV1 0 486 7 444 206 9 28 chr10 118201310 118201417 -27387871 + MER4A LTR ERV1 1 105 -559 701 231 117 31 chr10 118201441 118201765 -27387523 + LTR34 LTR ERV1 109 460 -239 789 237 51 31 chr10 118201775 118202089 -27387199 + MER4C LTR ERV1 278 465 0 351 0 0 0 chr10 118202092 118202131 -27387157 + (TG)n Simple_repeat Simple_repeat 2 40 0 2103 117 3 0 chr10 118203594 118203919 -27385369 - AluSp SINE Alu 0 327 2 255 105 0 0 chr10 118204116 118204154 -27385134 - MLT2A2 LTR ERVL 0 453 416 * 463 82 0 0 chr10 118204143 118204204 -27385084 - MLT2A2 LTR ERVL -392 61 1 329 65 0 0 chr10 118204568 118204614 -27384674 + Alu SINE Alu 254 299 -3 189 196 0 0 chr10 118204675 118204726 -27384562 + A-rich Low_complexity Low_complexity 1 51 0 617 215 7 22 chr10 118204788 118204923 -27384365 + AluJo SINE Alu 1 133 -179 849 228 0 0 chr10 118204964 118205122 -27384166 + AluJo SINE Alu 131 288 -24 183 287 119 30 chr10 118205995 118206096 -27383192 + MIR SINE MIR 151 260 -2 415 246 18 108 chr10 118206901 118207068 -27382220 + L1ME LINE L1 5604 5735 -386 554 258 15 8 chr10 118207087 118207219 -27382069 - MER58B DNA MER1_type -5 336 204 2787 179 17 75 chr10 118207606 118208256 -27381032 - LTR9 LTR ERV1 0 612 1 1021 332 29 25 chr10 118208329 118208814 -27380474 + L1MCb LINE L1 77 563 -5482 772 194 5 43 chr10 118208863 118209049 -27380239 - MLT1C LTR MaLR -230 237 59 1706 201 105 69 chr10 118209112 118209740 -27379548 + L1MCb LINE L1 1101 1856 -4708 279 0 0 0 chr10 118209740 118209771 -27379517 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 1706 201 105 69 chr10 118209771 118209972 -27379316 + L1MCb LINE L1 1856 2048 -4516 2735 221 11 88 chr10 118209977 118210792 -27378496 + L1MC3 LINE L1 6110 6861 -924 215 214 0 0 chr10 118210792 118210834 -27378454 + (CA)n Simple_repeat Simple_repeat 1 42 0 21 57 0 0 chr10 118260902 118260937 -27328351 + AT_rich Low_complexity Low_complexity 1 35 0 195 111 79 0 chr10 118260965 118261028 -27328260 + (TA)n Simple_repeat Simple_repeat 2 69 0 294 303 128 41 chr10 118261338 118261533 -27327755 + MER58C DNA MER1_type 4 215 0 710 281 97 41 chr10 118261576 118262247 -27327041 + L1ME2 LINE L1 1640 2389 -4332 412 245 20 89 chr10 118263378 118263680 -27325608 - L1ME2 LINE L1 -94 6070 5790 469 176 0 20 chr10 118264073 118264175 -27325113 + L1MA8 LINE L1 6188 6287 -4 367 241 67 22 chr10 118264185 118264409 -27324879 + L1ME2 LINE L1 5519 5752 -788 2272 105 0 10 chr10 118264416 118264729 -27324559 + AluSx SINE Alu 1 310 -2 1329 271 96 26 chr10 118264739 118265355 -27323933 + L1ME2 LINE L1 5882 6540 -18 245 390 47 6 chr10 118266707 118266879 -27322409 - L3 LINE CR1 -203 1374 1196 275 281 95 112 chr10 118267960 118268245 -27321043 + L2 LINE L2 3026 3305 -8 355 323 153 0 chr10 118269288 118269477 -27319811 - MIR SINE MIR -1 261 44 2467 254 88 46 chr10 118271568 118272645 -27316643 - L1MC4a LINE L1 -1194 6614 5493 1999 277 27 12 chr10 118272957 118273615 -27315673 - L1ME1 LINE L1 -16 6150 5483 1004 102 0 0 chr10 118273624 118273751 -27315537 - AluY SINE Alu -22 289 163 447 210 123 31 chr10 118273751 118273913 -27315375 - L1MC4a LINE L1 -1839 5969 5793 1375 65 0 0 chr10 118273913 118274081 -27315207 - AluY SINE Alu -143 168 1 1279 208 121 87 chr10 118274085 118274776 -27314512 - L1ME1 LINE L1 -684 5490 4773 1878 178 62 19 chr10 118274776 118275192 -27314096 + Tigger2a DNA MER2_type 1 434 0 1279 208 121 87 chr10 118275192 118275471 -27313817 - L1ME1 LINE L1 -1401 4773 4505 1250 274 33 57 chr10 118275472 118275925 -27313363 + MLT2B1 LTR ERVL 1 442 -78 267 31 0 0 chr10 118275969 118276001 -27313287 + (CA)n Simple_repeat Simple_repeat 1 32 0 1882 286 33 20 chr10 118276052 118276899 -27312389 - L1ME1 LINE L1 -1639 4507 3650 442 339 45 64 chr10 118277941 118278345 -27310943 + L2 LINE L2 2918 3313 0 267 320 10 20 chr10 118278739 118278839 -27310449 - MIR SINE MIR -159 103 5 2543 249 49 46 chr10 118279094 118280032 -27309256 - L1MC4a LINE L1 0 7808 6868 340 336 35 21 chr10 118280094 118280237 -27309051 + MIR3 SINE MIR 19 163 -45 317 309 44 25 chr10 118280644 118280848 -27308440 + L2 LINE L2 2972 3179 -134 1415 124 22 0 chr10 118281970 118282195 -27307093 - L1MA2 LINE L1 0 6304 6075 1043 283 24 6 chr10 118282394 118282723 -27306565 - LTR43 LTR ERV1 -137 465 131 4752 161 26 13 chr10 118282904 118284218 -27305070 - L1MA2 LINE L1 -194 6110 4775 1274 188 110 23 chr10 118284717 118285062 -27304226 + THE1C LTR MaLR 1 375 0 9533 136 56 4 chr10 118285062 118286564 -27302724 + THE1C-int LTR MaLR 1 1580 0 1590 150 126 26 chr10 118286564 118286905 -27302383 + THE1C LTR MaLR 1 375 0 503 411 14 11 chr10 118287004 118287291 -27301997 - L2 LINE L2 -428 2886 2599 2259 127 117 5 chr10 118288157 118288542 -27300746 + MSTA LTR MaLR 1 428 0 1082 261 4 0 chr10 118289683 118289963 -27299325 - L1ME1 LINE L1 -3305 2841 2561 5244 198 26 43 chr10 118289966 118291332 -27297956 + L1MA4 LINE L1 3337 4725 -1575 2081 116 3 3 chr10 118291332 118291624 -27297664 + AluSc SINE Alu 1 292 -17 5244 198 26 43 chr10 118291624 118291706 -27297582 + L1MA4 LINE L1 4725 4807 -1493 1436 240 3 19 chr10 118291706 118292014 -27297274 + AluJo SINE Alu 2 304 -8 5244 198 26 43 chr10 118292014 118292851 -27296437 + L1MA4 LINE L1 4807 5467 -833 2184 112 38 41 chr10 118292851 118293216 -27296072 + THE1B LTR MaLR 1 364 0 5244 198 26 43 chr10 118293216 118294028 -27295260 + L1MA4 LINE L1 5467 6291 -9 271 282 245 12 chr10 118296171 118296334 -27292954 - MIR SINE MIR -14 248 48 258 291 51 0 chr10 118297463 118297542 -27291746 + LTR16C LTR ERVL 374 456 -35 1611 194 39 89 chr10 118298463 118298900 -27290388 + MER67D LTR ERV1 21 435 -79 311 137 0 147 chr10 118298901 118299003 -27290285 + L1MA7 LINE L1 6204 6290 -1 342 344 67 17 chr10 118299437 118299617 -27289671 + MIR SINE MIR 20 208 -54 529 266 70 6 chr10 118302206 118302364 -27286924 + MLT1J1 LTR MaLR 47 214 -232 1241 223 101 21 chr10 118302722 118303050 -27286238 - MLT1C LTR MaLR -76 391 38 300 70 0 0 chr10 118303058 118303101 -27286187 + (TG)n Simple_repeat Simple_repeat 2 44 0 246 105 0 0 chr10 118303404 118303442 -27285846 + (CA)n Simple_repeat Simple_repeat 1 38 0 1257 322 63 33 chr10 118303461 118304032 -27285256 - MLT2F LTR ERVL -74 589 2 2471 268 38 10 chr10 118304360 118305092 -27284196 - L1PA13 LINE L1 -4715 2072 1320 920 349 35 5 chr10 118305199 118305603 -27283685 - L1PA13 LINE L1 -6176 611 196 384 175 0 0 chr10 118305620 118305683 -27283605 - MER81 DNA DNA -41 73 11 186 43 0 0 chr10 118305998 118306021 -27283267 + (T)n Simple_repeat Simple_repeat 1 23 0 308 325 103 24 chr10 118306408 118306534 -27282754 + MER91A DNA MER1_type 45 180 -16 2557 186 62 24 chr10 118307602 118307642 -27281646 - MLT2B2 LTR ERVL 0 515 478 183 80 0 0 chr10 118307642 118307667 -27281621 + (TAGA)n Simple_repeat Simple_repeat 2 26 0 2557 186 62 24 chr10 118307667 118308122 -27281166 - MLT2B2 LTR ERVL -37 478 1 2204 112 0 0 chr10 118309062 118309348 -27279940 + AluSg SINE Alu 1 286 -24 1713 170 61 15 chr10 118309543 118309885 -27279403 + THE1C LTR MaLR 18 375 0 242 279 25 25 chr10 118309929 118310090 -27279198 + (TA)n Simple_repeat Simple_repeat 2 162 0 552 148 62 23 chr10 118310503 118310631 -27278657 - L1MA9 LINE L1 0 6312 6180 1557 190 9 34 chr10 118310645 118310972 -27278316 - L1MA9 LINE L1 -243 6069 5751 237 77 0 0 chr10 118311020 118311059 -27278229 - L1M2 LINE L1 -498 5793 5755 12514 196 79 20 chr10 118311062 118311081 -27278207 - L1M2 LINE L1 -497 6531 6515 198 0 0 0 chr10 118311081 118311103 -27278185 + (TG)n Simple_repeat Simple_repeat 1 22 0 180 0 0 0 chr10 118311102 118311122 -27278166 + (GA)n Simple_repeat Simple_repeat 1 20 0 * 12514 196 79 20 chr10 118311103 118317253 -27272035 - L1M2 LINE L1 -513 6515 6 386 293 9 9 chr10 118317564 118317670 -27271618 - MIR SINE MIR -106 156 51 351 282 177 14 chr10 118319048 118319257 -27270031 + MIR SINE MIR 20 262 0 263 338 77 24 chr10 118319832 118320039 -27269249 - L1MC/D LINE L1 -2084 5724 5507 29 28 0 0 chr10 118320534 118320570 -27268718 + AT_rich Low_complexity Low_complexity 1 36 0 6760 68 2 3 chr10 118321104 118322065 -27267223 + L1PA7 LINE L1 5183 6142 -12 22 80 0 0 chr10 118322066 118322116 -27267172 + AT_rich Low_complexity Low_complexity 1 50 0 1825 221 29 41 chr10 118322357 118322849 -27266439 - MER67D LTR ERV1 -28 486 1 274 327 97 0 chr10 118323839 118323952 -27265336 - MIR3 SINE MIR 0 208 85 184 317 87 48 chr10 118324330 118324434 -27264854 - MIR SINE MIR -135 127 20 24 53 0 0 chr10 118328146 118328184 -27261104 + AT_rich Low_complexity Low_complexity 1 38 0 376 339 39 35 chr10 118328408 118328668 -27260620 + MIR SINE MIR 2 262 0 315 0 0 0 chr10 118329760 118329795 -27259493 + (TC)n Simple_repeat Simple_repeat 2 36 0 189 0 0 0 chr10 118329794 118329815 -27259473 + (TG)n Simple_repeat Simple_repeat 2 22 0 * 370 391 129 9 chr10 118330758 118331177 -27258111 + L2 LINE L2 2804 3272 0 215 275 12 12 chr10 118332472 118332552 -27256736 - MIR SINE MIR -3 259 180 1767 322 45 44 chr10 118332764 118333945 -27255343 - HERV16 LTR ERVL -1911 3085 2150 1845 312 32 57 chr10 118334461 118335491 -27253797 - HERV16 LTR ERVL -3687 1309 306 21 36 0 0 chr10 118336287 118336315 -27252973 + AT_rich Low_complexity Low_complexity 1 28 0 238 354 49 15 chr10 118336883 118337012 -27252276 + MIR SINE MIR 24 154 -67 380 313 52 64 chr10 118337647 118337880 -27251408 + MIR SINE MIR 21 250 -12 805 250 78 17 chr10 118338089 118338321 -27250967 - MIR SINE MIR -2 260 15 498 96 0 0 chr10 118338536 118338609 -27250679 + (TG)n Simple_repeat Simple_repeat 1 73 0 264 312 48 56 chr10 118338902 118339027 -27250261 - L2 LINE L2 -32 3240 3117 396 97 0 0 chr10 118339909 118339971 -27249317 + (CA)n Simple_repeat Simple_repeat 2 63 0 315 322 103 14 chr10 118341970 118342184 -27247104 - MIR SINE MIR -5 257 25 266 356 29 19 chr10 118342805 118342909 -27246379 - MER91A DNA MER1_type -91 105 1 2079 135 0 0 chr10 118343110 118343406 -27245882 - AluSq SINE Alu -17 296 1 1610 219 37 50 chr10 118344506 118344966 -27244322 + MLT1C LTR MaLR 1 454 -13 1846 195 48 20 chr10 118344966 118345474 -27243814 + LTR27 LTR ERV1 2 501 0 295 238 305 0 chr10 118345595 118345700 -27243588 + LTR27-int LTR ERV1 113 249 -6842 459 0 0 0 chr10 118345700 118345751 -27243537 + (TG)n Simple_repeat Simple_repeat 2 52 0 1772 142 11 0 chr10 118345757 118346018 -27243270 - AluSq SINE Alu -49 264 1 692 257 77 6 chr10 118346022 118346205 -27243083 + LTR27-int LTR ERV1 406 601 -6490 14396 168 33 22 chr10 118346493 118351341 -27237947 + LTR27-int LTR ERV1 602 5484 -393 1130 127 48 11 chr10 118351339 118351528 -27237760 + LTR27-int LTR ERV1 6892 7087 -4 * 2032 173 55 14 chr10 118351532 118352037 -27237251 + LTR27 LTR ERV1 3 501 0 21 0 0 0 chr10 118352068 118352089 -27237199 + AT_rich Low_complexity Low_complexity 1 21 0 366 347 57 44 chr10 118353105 118353353 -27235935 - MIR SINE MIR -2 260 10 186 43 0 0 chr10 118353718 118353741 -27235547 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 253 246 85 92 chr10 118353852 118353982 -27235306 - MIR3 SINE MIR -68 140 12 386 378 41 5 chr10 118354787 118354983 -27234305 + MIR SINE MIR 3 205 -57 206 279 0 0 chr10 118356266 118356309 -27232979 + L2 LINE L2 3210 3252 -20 25 0 0 0 chr10 118356686 118356711 -27232577 + AT_rich Low_complexity Low_complexity 1 25 0 649 189 0 16 chr10 118356712 118356839 -27232449 - FLAM_C SINE Alu -18 125 1 1571 204 139 99 chr10 118356965 118357411 -27231877 + MLT2B1 LTR ERVL 1 464 0 481 335 40 28 chr10 118358059 118358310 -27230978 + MIR SINE MIR 9 262 0 579 276 32 138 chr10 118359092 118359526 -27229762 + MLT1G LTR MaLR 5 392 -150 330 246 0 0 chr10 118359562 118359631 -27229657 + MIR SINE MIR 94 162 -100 210 260 0 14 chr10 118359659 118359732 -27229556 + A-rich Low_complexity Low_complexity 1 72 0 230 293 0 0 chr10 118359954 118360012 -27229276 + (TG)n Simple_repeat Simple_repeat 2 59 0 180 319 149 21 chr10 118361187 118361281 -27228007 + MIR SINE MIR 36 141 -67 256 169 0 14 chr10 118361351 118361422 -27227866 - L1MC4 LINE L1 -1333 6709 6640 325 321 61 24 chr10 118361526 118361691 -27227597 + MIR SINE MIR 84 254 -8 180 125 0 0 chr10 118361701 118361733 -27227555 + (T)n Simple_repeat Simple_repeat 1 32 0 187 294 35 35 chr10 118362025 118362110 -27227178 + MIR SINE MIR 65 149 -59 187 347 0 27 chr10 118362199 118362274 -27227014 - L2 LINE L2 -94 3178 3106 252 313 0 0 chr10 118362315 118362382 -27226906 - L2 LINE L2 -13 3259 3193 263 82 49 16 chr10 118362507 118362568 -27226720 + (TCTA)n Simple_repeat Simple_repeat 3 65 0 2054 94 0 10 chr10 118363271 118363570 -27225718 - L1PA13 LINE L1 -2 6161 5866 388 80 0 0 chr10 118363570 118363620 -27225668 + L1P4 LINE L1 5714 5763 -402 195 170 0 0 chr10 118363802 118363849 -27225439 + (CAT)n Simple_repeat Simple_repeat 3 49 0 380 273 65 14 chr10 118364351 118364490 -27224798 - MIR SINE MIR -111 151 6 224 295 0 16 chr10 118365060 118365121 -27224167 + MIR SINE MIR 77 136 -72 189 333 126 0 chr10 118365449 118365560 -27223728 - MER5A DNA MER1_type -25 164 40 405 307 142 13 chr10 118365803 118366028 -27223260 + MIR SINE MIR 1 254 -8 2111 117 7 0 chr10 118366214 118366512 -27222776 - AluSq SINE Alu -11 302 3 180 0 0 0 chr10 118366522 118366542 -27222746 + (T)n Simple_repeat Simple_repeat 1 20 0 663 242 75 61 chr10 118366557 118366916 -27222372 - MLT1H LTR MaLR -168 374 44 35 0 0 0 chr10 118367273 118367308 -27221980 + AT_rich Low_complexity Low_complexity 1 35 0 362 285 69 51 chr10 118368009 118368342 -27220946 - L1MC4a LINE L1 -1789 6019 5681 27 29 0 0 chr10 118368371 118368405 -27220883 + AT_rich Low_complexity Low_complexity 1 34 0 14311 157 24 19 chr10 118368405 118373821 -27215467 - L1MA1 LINE L1 0 7721 2271 9560 176 28 10 chr10 118373798 118376519 -27212769 - L1M1 LINE L1 -3715 3850 652 * 5529 63 3 1 chr10 118376517 118377248 -27212040 + L1P LINE L1 1216 1947 -4199 * 433 273 155 44 chr10 118377628 118377995 -27211293 - MLT1K LTR MaLR -10 578 171 2653 129 24 40 chr10 118378187 118378805 -27210483 - MER4E LTR ERV1 0 779 1 24 32 0 0 chr10 118379109 118379140 -27210148 + AT_rich Low_complexity Low_complexity 1 31 0 227 395 82 0 chr10 118379212 118379346 -27209942 + MIR3 SINE MIR 16 160 -48 2018 117 3 0 chr10 118379910 118380210 -27209078 + L1PA11 LINE L1 5868 6168 -6 974 96 85 45 chr10 118380222 118380303 -27208985 - L1P4 LINE L1 -698 5476 5400 1840 131 10 27 chr10 118380303 118380600 -27208688 - AluSx SINE Alu -20 292 1 974 96 85 45 chr10 118380600 118380717 -27208571 - L1P4 LINE L1 -774 5400 5270 1278 240 53 49 chr10 118380728 118381257 -27208031 + L1ME1 LINE L1 5629 6159 -7 1281 204 84 0 chr10 118382119 118382394 -27206894 + AluJo SINE Alu 1 298 -14 363 379 39 7 chr10 118382679 118382832 -27206456 - MIR SINE MIR -103 159 2 535 356 54 66 chr10 118383997 118384589 -27204699 - L2 LINE L2 -790 2524 1940 318 237 0 52 chr10 118384668 118384765 -27204523 + L1MC4 LINE L1 6612 6703 -1339 4312 185 28 39 chr10 118384787 118386217 -27203071 - L1MB1 LINE L1 -1 6167 4738 823 94 0 247 chr10 118386217 118386314 -27202974 - Tigger5 DNA MER2_type -1 2322 2315 1645 168 66 36 chr10 118386314 118386678 -27202610 + THE1C LTR MaLR 1 375 0 823 94 0 247 chr10 118386678 118386815 -27202473 - Tigger5 DNA MER2_type -8 2315 2146 2146 108 0 10 chr10 118386839 118387136 -27202152 + AluSg SINE Alu 3 296 -14 830 251 107 37 chr10 118387176 118387391 -27201897 + MER8 DNA MER2_type 9 238 -1 1567 251 37 78 chr10 118387394 118388100 -27201188 - L1M4c LINE L1 -4552 1832 1156 * 1960 290 50 30 chr10 118388076 118389314 -27199974 - L1M3de LINE L1 -4835 1056 6 216 333 76 15 chr10 118389333 118389465 -27199823 - L2 LINE L2 -1634 1680 1541 2344 238 82 19 chr10 118389564 118390332 -27198956 - L1MB7 LINE L1 -103 6081 5266 6086 158 50 20 chr10 118390334 118391526 -27197762 - Tigger3b DNA MER2_type -3 1228 2 470 186 25 17 chr10 118391550 118391668 -27197620 - L1MB7 LINE L1 -901 5245 5127 1717 214 72 33 chr10 118391673 118392212 -27197076 - L1MB7 LINE L1 -2910 3236 2667 243 0 0 0 chr10 118392212 118392239 -27197049 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1717 214 72 33 chr10 118392239 118392339 -27196949 - L1MB7 LINE L1 -3479 2667 2572 2068 125 0 0 chr10 118392649 118392944 -27196344 - AluY SINE Alu -16 295 1 478 255 96 70 chr10 118394343 118394614 -27194674 - L2 LINE L2 -1 3312 3035 947 310 127 23 chr10 118394844 118395499 -27193789 - L1ME3A LINE L1 -6 6164 5437 1041 128 50 173 chr10 118399720 118399786 -27189502 - Tigger3(Golem) DNA MER2_type -44 2984 2912 1804 152 0 0 chr10 118399786 118400063 -27189225 + AluSx SINE Alu 1 277 -35 1041 128 50 173 chr10 118400063 118400352 -27188936 - Tigger3(Golem) DNA MER2_type -116 2912 18 3175 93 19 7 chr10 118400364 118400796 -27188492 - LTR3b LTR ERVK 0 437 1 452 224 20 34 chr10 118400827 118400974 -27188314 + Charlie1 DNA MER1_type 2611 2755 -6 319 261 200 30 chr10 118401028 118401193 -27188095 + MIR SINE MIR 67 259 -3 324 307 0 10 chr10 118402286 118402387 -27186901 - MIR SINE MIR -111 151 52 299 296 40 16 chr10 118403163 118403288 -27186000 - L1ME LINE L1 -512 5845 5718 196 329 104 60 chr10 118404726 118405024 -27184264 - L2 LINE L2 -1015 2299 1989 2172 115 10 0 chr10 118405077 118405381 -27183907 + AluSx SINE Alu 1 307 -5 483 63 0 0 chr10 118406037 118406100 -27183188 + (TAGA)n Simple_repeat Simple_repeat 1 63 0 232 305 53 80 chr10 118406358 118406509 -27182779 - L2 LINE L2 -211 3061 2915 369 360 30 50 chr10 118406660 118406957 -27182331 - L2 LINE L2 -559 2755 2465 1739 91 12 4 chr10 118407158 118407399 -27181889 + AluY SINE Alu 41 283 -28 284 374 19 24 chr10 118407503 118407714 -27181574 + L2 LINE L2 2162 2371 -943 2243 91 0 10 chr10 118408053 118408351 -27180937 - AluSx SINE Alu -17 295 1 392 241 67 22 chr10 118408358 118408582 -27180706 - L1ME LINE L1 -788 5594 5361 1717 160 118 8 chr10 118408592 118408974 -27180314 - L1MA8 LINE L1 -4 6287 5864 291 293 121 15 chr10 118409383 118409581 -27179707 - L1ME LINE L1 -2965 3417 3199 1118 263 134 23 chr10 118409601 118410449 -27178839 - L1MEc LINE L1 -3302 3080 2181 372 267 87 12 chr10 118410907 118411093 -27178195 - L1MEc LINE L1 -4846 1717 1368 372 300 25 8 chr10 118411097 118411217 -27178071 - MER58A DNA MER1_type 0 127 6 21 0 0 0 chr10 118411244 118411265 -27178023 + AT_rich Low_complexity Low_complexity 1 21 0 412 311 76 66 chr10 118411266 118411661 -27177627 - L1MEc LINE L1 -5326 1237 839 1081 64 0 0 chr10 118412814 118412955 -27176333 + L1PA7 LINE L1 6013 6153 -1 2046 139 0 0 chr10 118413887 118414198 -27175090 + AluSx SINE Alu 1 311 0 50 42 0 0 chr10 118414722 118414793 -27174495 + AT_rich Low_complexity Low_complexity 1 71 0 1789 172 57 28 chr10 118414804 118415158 -27174130 + THE1B LTR MaLR 1 364 0 198 103 0 0 chr10 118415743 118415772 -27173516 + (TTCA)n Simple_repeat Simple_repeat 2 30 0 548 278 62 11 chr10 118416065 118416241 -27173047 + MIR SINE MIR 69 253 -9 457 311 84 24 chr10 118416229 118416396 -27172892 - MIR SINE MIR -3 205 27 * 31 68 0 0 chr10 118417975 118418034 -27171254 + AT_rich Low_complexity Low_complexity 1 59 0 2109 207 167 26 chr10 118418046 118418736 -27170552 + LTR48 LTR ERV1 1 787 0 1913 129 3 24 chr10 118419029 118419316 -27169972 - AluSg SINE Alu -24 286 6 294 73 0 0 chr10 118419690 118419731 -27169557 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 2229 131 48 55 chr10 118419988 118420566 -27168722 + MER4A LTR ERV1 1 465 0 336 119 0 0 chr10 118421476 118421535 -27167753 + (CATAA)n Simple_repeat Simple_repeat 1 59 0 477 268 0 58 chr10 118422184 118422322 -27166966 + MER96 DNA MER1_type? 8 137 -38 286 380 48 24 chr10 118422459 118422858 -27166430 + L2 LINE L2 2641 3048 -265 2013 229 47 11 chr10 118422875 118423413 -27165875 - L1MB8 LINE L1 -7 6171 5615 1020 198 52 21 chr10 118423401 118423689 -27165599 - L1MB8 LINE L1 -770 5376 5080 * 23 0 0 0 chr10 118423713 118423736 -27165552 + AT_rich Low_complexity Low_complexity 1 23 0 531 281 22 0 chr10 118423751 118423886 -27165402 - MER82 DNA MER2_type -515 138 1 3651 288 70 38 chr10 118423897 118425977 -27163311 - L1M4c LINE L1 -4816 2143 8 2649 119 31 5 chr10 118426844 118427263 -27162025 + L1PA16 LINE L1 5728 6157 -9 1645 256 131 31 chr10 118427694 118428244 -27161044 - MER77 LTR ERV1 0 605 1 2347 80 0 20 chr10 118428460 118428762 -27160526 - AluY SINE Alu -15 296 1 450 371 44 0 chr10 118428768 118428997 -27160291 - MIR SINE MIR -14 248 10 350 320 109 0 chr10 118429324 118429452 -27159836 + L3 LINE CR1 1348 1489 -88 220 189 0 0 chr10 118430539 118430576 -27158712 + GA-rich Low_complexity Low_complexity 1 37 0 366 351 74 10 chr10 118431998 118432113 -27157175 - MIR SINE MIR 0 262 156 297 0 0 0 chr10 118432113 118432146 -27157142 + (TA)n Simple_repeat Simple_repeat 2 34 0 366 351 74 10 chr10 118432146 118432232 -27157056 - MIR SINE MIR -106 156 48 313 358 74 0 chr10 118432880 118433028 -27156260 + MIR SINE MIR 56 214 -48 1740 83 38 8 chr10 118433029 118433293 -27155995 - L1MA1 LINE L1 -337 5965 5694 615 72 0 0 chr10 118433293 118433371 -27155917 + L1MA1 LINE L1 6219 6301 -1 594 356 59 16 chr10 118433941 118434244 -27155044 + LTR16A LTR ERVL 60 375 -75 192 152 0 0 chr10 118434276 118434309 -27154979 + T-rich Low_complexity Low_complexity 1 33 0 1320 323 50 22 chr10 118434354 118434988 -27154300 + HERV16 LTR ERVL 13 664 -4332 3872 195 43 7 chr10 118435106 118435942 -27153346 - L1MC3 LINE L1 -6 7779 6914 28 0 0 0 chr10 118436668 118436696 -27152592 + AT_rich Low_complexity Low_complexity 1 28 0 5974 104 28 1 chr10 118436963 118437217 -27152071 + L1PA10 LINE L1 4397 4643 -1525 1540 167 83 17 chr10 118437217 118437505 -27151783 + AluSx SINE Alu 1 307 -5 5974 104 28 1 chr10 118437505 118439001 -27150287 + L1PA10 LINE L1 4643 6168 0 198 338 45 30 chr10 118439062 118439195 -27150093 - MIR SINE MIR -70 192 58 677 273 38 39 chr10 118439389 118439630 -27149658 - MIR SINE MIR -18 244 3 216 163 0 0 chr10 118440031 118440074 -27149214 + (CA)n Simple_repeat Simple_repeat 2 44 0 381 289 98 23 chr10 118440147 118440320 -27148968 + L2 LINE L2 1787 1972 -1342 361 277 9 0 chr10 118440335 118440447 -27148841 - MER94 DNA DNA -21 113 1 416 309 96 70 chr10 118440448 118440723 -27148565 + L2 LINE L2 1956 2249 -1065 1519 104 0 0 chr10 118440723 118440916 -27148372 - AluSg/x SINE Alu -8 304 112 416 309 96 70 chr10 118440916 118441097 -27148191 + L2 LINE L2 2249 2424 -890 2110 189 48 76 chr10 118441098 118441663 -27147625 - MLT2B3 LTR ERVL -5 549 1 22 35 0 0 chr10 118441871 118441900 -27147388 + AT_rich Low_complexity Low_complexity 1 29 0 2826 149 23 92 chr10 118441900 118442544 -27146744 + MER7C DNA MER2_type 2 601 -1 203 170 21 0 chr10 118443049 118443096 -27146192 + T-rich Low_complexity Low_complexity 2 49 0 2384 210 92 28 chr10 118443696 118444377 -27144911 - MER50 LTR ERV1 0 734 10 462 79 0 0 chr10 118446274 118446337 -27142951 + (CAGA)n Simple_repeat Simple_repeat 2 64 0 3310 124 14 0 chr10 118446420 118446942 -27142346 + MER51C LTR ERV1 1 640 0 318 26 0 0 chr10 118448689 118448728 -27140560 + (CA)n Simple_repeat Simple_repeat 2 40 0 923 256 52 46 chr10 118449520 118449980 -27139308 - L1M4 LINE L1 -1418 4728 4266 3251 184 43 0 chr10 118449997 118450553 -27138735 - LTR69 LTR ERVL -8 580 1 234 170 190 20 chr10 118450556 118450656 -27138632 - L1M4 LINE L1 -1888 4258 4142 1438 233 98 8 chr10 118450839 118451362 -27137926 - L1M4 LINE L1 -2105 4041 3472 312 117 70 23 chr10 118452359 118452530 -27136758 + (TA)n Simple_repeat Simple_repeat 2 180 0 404 172 65 12 chr10 118452542 118452711 -27136577 + (TA)n Simple_repeat Simple_repeat 2 179 0 185 61 61 20 chr10 118452738 118452787 -27136501 + (TATAA)n Simple_repeat Simple_repeat 5 55 0 588 151 0 0 chr10 118452797 118452883 -27136405 + AluY SINE Alu 202 287 -24 507 110 24 65 chr10 118452904 118453199 -27136089 + (TATAA)n Simple_repeat Simple_repeat 1 283 0 40 0 0 0 chr10 118453211 118453251 -27136037 + AT_rich Low_complexity Low_complexity 1 40 0 42392 34 23 1 chr10 118453252 118459256 -27130032 + L1HS LINE L1 22 6155 0 277 114 84 18 chr10 118459265 118459432 -27129856 + (TA)n Simple_repeat Simple_repeat 2 179 0 298 229 0 21 chr10 118459432 118459559 -27129729 + (TATAA)n Simple_repeat Simple_repeat 1 124 0 1276 155 0 10 chr10 118459559 118459753 -27129535 - AluSg/x SINE Alu -24 288 97 1448 327 54 21 chr10 118459798 118460687 -27128601 - L1MEc LINE L1 -5366 1030 113 1781 134 34 7 chr10 118461036 118461327 -27127961 + AluSx SINE Alu 1 299 -13 2440 87 0 0 chr10 118462353 118462664 -27126624 + AluY SINE Alu 1 311 0 283 374 19 24 chr10 118462987 118463198 -27126090 - L2 LINE L2 -943 2371 2162 2025 80 11 0 chr10 118463281 118463543 -27125745 - AluY SINE Alu -6 305 41 372 357 30 50 chr10 118463744 118464041 -27125247 + L2 LINE L2 2465 2755 -559 233 305 53 80 chr10 118464192 118464343 -27124945 + L2 LINE L2 2915 3061 -211 519 60 0 0 chr10 118464601 118464668 -27124620 + (TCTA)n Simple_repeat Simple_repeat 1 67 0 2238 109 10 0 chr10 118465324 118465628 -27123660 - AluSx SINE Alu -5 307 1 193 318 107 62 chr10 118465681 118465970 -27123318 + L2 LINE L2 1989 2290 -1024 25 65 0 0 chr10 118467189 118467235 -27122053 + AT_rich Low_complexity Low_complexity 1 46 0 278 285 29 44 chr10 118467406 118467543 -27121745 + L1ME LINE L1 5475 5609 -512 322 307 0 10 chr10 118468322 118468423 -27120865 + MIR SINE MIR 52 151 -111 313 261 200 30 chr10 118469517 118469682 -27119606 - MIR SINE MIR -3 259 67 439 224 20 34 chr10 118469736 118469883 -27119405 - Charlie1 DNA MER1_type -6 2755 2611 3197 93 19 7 chr10 118469914 118470346 -27118942 + LTR3b LTR ERVK 1 437 0 1029 128 50 173 chr10 118470358 118470647 -27118641 + Tigger3(Golem) DNA MER2_type 18 341 -2687 1862 148 0 0 chr10 118470647 118470924 -27118364 - AluSx SINE Alu -35 277 1 1029 128 50 173 chr10 118470924 118470990 -27118298 + Tigger3(Golem) DNA MER2_type 341 2984 -44 894 305 120 21 chr10 118475211 118475867 -27113421 + L1ME3A LINE L1 5437 6164 -6 468 255 96 70 chr10 118476096 118476367 -27112921 + L2 LINE L2 3035 3312 -1 2103 125 0 0 chr10 118477768 118478063 -27111225 + AluY SINE Alu 1 295 -16 1337 218 80 18 chr10 118478373 118478473 -27110815 + L1M4 LINE L1 2572 2664 -3482 243 0 0 0 chr10 118478473 118478500 -27110788 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 1337 218 80 18 chr10 118478500 118478848 -27110440 + L1M4 LINE L1 2664 3048 -3098 214 357 50 14 chr10 118480070 118480210 -27109078 - L2 LINE L2 -586 2728 2584 30 27 0 0 chr10 118481069 118481106 -27108182 + AT_rich Low_complexity Low_complexity 1 37 0 515 376 90 22 chr10 118481435 118481802 -27107486 + L3 LINE CR1 1117 1508 -69 617 288 114 47 chr10 118481875 118482305 -27106983 + MLT1H LTR MaLR 78 536 -13 318 216 252 9 chr10 118483009 118483120 -27106168 - MIR SINE MIR -34 228 91 267 31 0 0 chr10 118483129 118483161 -27106127 + (CA)n Simple_repeat Simple_repeat 2 33 0 2052 137 0 19 chr10 118484634 118484949 -27104339 - AluSc SINE Alu 0 309 1 29 0 0 0 chr10 118485180 118485209 -27104079 + AT_rich Low_complexity Low_complexity 1 29 0 3894 153 37 8 chr10 118485209 118486166 -27103122 + L1PB3 LINE L1 4885 5877 -277 591 290 131 32 chr10 118486176 118486679 -27102609 + L2 LINE L2 2678 3312 -1 422 303 52 38 chr10 118487282 118487493 -27101795 + MIR SINE MIR 48 261 -1 181 286 54 0 chr10 118487488 118487544 -27101744 - MIR SINE MIR -1 261 203 * 1857 139 0 40 chr10 118487792 118488093 -27101195 - AluSx SINE Alu -23 289 1 392 320 57 21 chr10 118488834 118489028 -27100260 - MIR SINE MIR -56 206 6 29 47 0 0 chr10 118490836 118490879 -27098409 + AT_rich Low_complexity Low_complexity 1 43 0 206 294 141 0 chr10 118491024 118491109 -27098179 - MIR3 SINE MIR -2 206 110 347 319 35 0 chr10 118491163 118491279 -27098009 + L2 LINE L2 3190 3309 -4 277 197 26 0 chr10 118491466 118491542 -27097746 + GA-rich Low_complexity Low_complexity 4 81 0 268 306 9 18 chr10 118491542 118491653 -27097635 + A-rich Low_complexity Low_complexity 3 112 0 3695 193 22 35 chr10 118491653 118492472 -27096816 + L1MB4 LINE L1 5370 6177 -3 2378 57 0 0 chr10 118493394 118493699 -27095589 - AluY SINE Alu 0 305 1 6163 22 0 3 chr10 118493853 118494573 -27094715 - L1PA3 LINE L1 -1 6154 5437 1238 19 0 0 chr10 118494573 118494728 -27094560 + L1P LINE L1 5275 5429 -726 223 175 16 16 chr10 118494881 118494944 -27094344 + (CATA)n Simple_repeat Simple_repeat 2 64 0 1660 182 0 38 chr10 118495481 118495794 -27093494 - AluJb SINE Alu -11 301 1 2016 124 3 3 chr10 118495818 118496134 -27093154 + AluSp SINE Alu 1 316 0 23 0 0 0 chr10 118498146 118498169 -27091119 + AT_rich Low_complexity Low_complexity 1 23 0 210 355 66 0 chr10 118498461 118498537 -27090751 + MIR3 SINE MIR 104 184 -24 250 324 48 29 chr10 118498725 118498830 -27090458 - MIR SINE MIR -65 143 37 1695 167 67 76 chr10 118498935 118499371 -27089917 + L1MA7 LINE L1 5854 6285 -6 270 176 0 0 chr10 118499453 118499504 -27089784 + (TG)n Simple_repeat Simple_repeat 1 51 0 228 145 53 26 chr10 118499976 118500052 -27089236 + L1ME4a LINE L1 6041 6118 -3 198 259 24 71 chr10 118501142 118501227 -27088061 + MIR SINE MIR 105 185 -77 246 62 0 0 chr10 118501787 118501819 -27087469 + (TG)n Simple_repeat Simple_repeat 1 32 0 419 298 10 67 chr10 118501852 118502060 -27087228 + MLT1G LTR MaLR 217 412 -178 2446 72 0 0 chr10 118502142 118502447 -27086841 - AluY SINE Alu -6 305 1 228 305 25 68 chr10 118502812 118502959 -27086329 + MIR SINE MIR 72 210 -52 307 263 22 26 chr10 118503865 118503998 -27085290 + MIR SINE MIR 71 200 -62 2178 104 27 0 chr10 118504145 118504444 -27084844 - AluSp SINE Alu -6 307 1 295 326 83 28 chr10 118505731 118505875 -27083413 - MER5B DNA MER1_type -26 152 1 339 253 22 22 chr10 118506247 118506338 -27082950 - MIR SINE MIR -68 140 50 559 248 85 7 chr10 118507283 118507436 -27081852 - MLT1H LTR MaLR -250 299 135 290 364 6 19 chr10 118507636 118507798 -27081490 + L3 LINE CR1 714 873 -704 1451 344 18 8 chr10 118507890 118508512 -27080776 - MLT2E LTR ERVL 0 628 1 1585 200 43 58 chr10 118508736 118509151 -27080137 + MLT2D LTR ERVL 1 409 -5 616 237 43 34 chr10 118509249 118509456 -27079832 - MER3 DNA MER1_type 0 209 1 21 0 0 0 chr10 118510204 118510225 -27079063 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr10 118510260 118510288 -27079000 + AT_rich Low_complexity Low_complexity 1 28 0 298 289 123 27 chr10 118510542 118510729 -27078559 - Charlie8 DNA MER1_type -2152 265 61 833 205 102 39 chr10 118510995 118511200 -27078088 + MER20 DNA MER1_type 1 218 -1 759 168 15 0 chr10 118511516 118511647 -27077641 - L1MC1 LINE L1 -14 6319 6187 1657 154 52 0 chr10 118511844 118512111 -27077177 + AluSx SINE Alu 1 281 -31 716 176 99 14 chr10 118511989 118512131 -27077157 + AluJo/FRAM SINE Alu 146 299 -13 2221 123 0 3 chr10 118512133 118512441 -27076847 + AluSx SINE Alu 1 307 -5 686 219 24 43 chr10 118512441 118512605 -27076683 + MER58B DNA MER1_type 181 341 0 667 298 28 6 chr10 118512620 118512798 -27076490 + MER5A DNA MER1_type 8 189 0 246 273 30 50 chr10 118512807 118512906 -27076382 - MER5A DNA MER1_type -1 188 92 574 259 30 9 chr10 118513409 118513641 -27075647 - L1MDa LINE L1 -3764 2776 2540 4546 224 16 6 chr10 118513647 118514798 -27074490 + L1 LINE L1 4125 5286 -860 4211 134 29 8 chr10 118514792 118515546 -27073742 + L1PA16 LINE L1 5353 6157 -9 * 1127 230 128 49 chr10 118515566 118515812 -27073476 - L1MDa LINE L1 -4011 2529 2304 9584 92 25 4 chr10 118515812 118517992 -27071296 - L1PA7 LINE L1 -3 6151 3942 1127 230 128 49 chr10 118517992 118518379 -27070909 - L1MDa LINE L1 -4236 2304 1846 412 305 21 47 chr10 118519746 118519936 -27069352 - MIR SINE MIR -58 204 20 2545 212 23 2 chr10 118520154 118520625 -27068663 + Tigger7 DNA MER2_type 1 481 -2006 256 154 0 0 chr10 118520632 118520671 -27068617 + Tigger7 DNA MER2_type 1017 1055 -1432 * 1549 161 33 27 chr10 118520666 118520965 -27068323 + Tigger7 DNA MER2_type 2186 2486 -1 2214 108 3 0 chr10 118521122 118521418 -27067870 - AluSp SINE Alu -16 297 1 237 379 48 19 chr10 118521978 118522081 -27067207 - L2 LINE L2 -33 3239 3134 629 261 204 68 chr10 118522103 118522235 -27067053 - LTR16A LTR ERVL 0 450 337 2028 131 29 29 chr10 118522235 118522610 -27066678 - THE1C LTR MaLR 0 375 1 629 261 204 68 chr10 118522610 118522860 -27066428 - LTR16A LTR ERVL -113 337 16 304 338 63 28 chr10 118522941 118523083 -27066205 - L2 LINE L2 -187 3085 2939 183 343 10 10 chr10 118523207 118523306 -27065982 - L2 LINE L2 -568 2746 2648 262 228 89 0 chr10 118523440 118523519 -27065769 - MIR SINE MIR -48 214 129 306 339 104 0 chr10 118523536 118523651 -27065637 - MIR SINE MIR -108 154 28 459 279 43 7 chr10 118524158 118524298 -27064990 - MLT1J2 LTR MaLR -281 169 25 198 0 0 0 chr10 118525377 118525399 -27063889 + (TTTC)n Simple_repeat Simple_repeat 2 23 0 4600 21 0 0 chr10 118525399 118525927 -27063361 - L1PA3 LINE L1 -7 6148 5621 4320 19 0 0 chr10 118525931 118526722 -27062566 + L1P1 LINE L1 4877 5667 -488 183 139 0 0 chr10 118526889 118526925 -27062363 + (CAT)n Simple_repeat Simple_repeat 3 38 0 298 292 34 0 chr10 118526930 118527019 -27062269 - MIR SINE MIR -10 252 161 1203 198 130 16 chr10 118528022 118528330 -27060958 + MER2 DNA MER2_type 2 344 0 233 204 0 0 chr10 118529606 118529650 -27059638 + (CA)n Simple_repeat Simple_repeat 1 44 0 2144 113 7 0 chr10 118530031 118530333 -27058955 + AluSc SINE Alu 1 304 -5 1362 153 54 25 chr10 118530604 118530888 -27058400 + MER1B DNA MER1_type 1 339 0 210 330 100 40 chr10 118531724 118531824 -27057464 - MER5A DNA MER1_type -83 106 1 201 316 0 51 chr10 118532083 118532162 -27057126 - MIR SINE MIR -116 146 72 429 158 0 0 chr10 118532493 118532575 -27056713 + GA-rich Low_complexity Low_complexity 2 83 0 182 37 37 0 chr10 118532677 118532704 -27056584 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 437 247 0 0 chr10 118533192 118533281 -27056007 + HERV16 LTR ERVL 343 431 -4565 357 345 123 24 chr10 118533879 118534293 -27054995 + LTR16A1 LTR ERVL 3 457 0 1252 200 0 0 chr10 118535039 118535259 -27054029 + AluJo SINE Alu 1 220 -92 370 300 129 12 chr10 118536246 118536416 -27052872 + MIR SINE MIR 20 209 -53 704 133 0 50 chr10 118536550 118536670 -27052618 - FLAM_A SINE Alu -17 125 12 187 376 93 20 chr10 118537079 118537326 -27051962 - L2 LINE L2 -424 2890 2626 * 234 246 16 16 chr10 118537309 118537370 -27051918 + MIR SINE MIR 93 153 -109 1093 185 40 61 chr10 118538205 118538502 -27050786 + MER33 DNA MER1_type 2 292 -32 451 250 6 39 chr10 118538951 118539107 -27050181 - L1ME4a LINE L1 -237 5884 5734 253 297 34 34 chr10 118539586 118539704 -27049584 + MIR SINE MIR 129 246 -16 1156 223 152 77 chr10 118541404 118541885 -27047403 - MER21A LTR ERV1 -410 521 5 277 239 0 18 chr10 118541889 118541998 -27047290 + (TA)n Simple_repeat Simple_repeat 1 107 0 341 385 61 18 chr10 118542105 118542435 -27046853 + L2 LINE L2 2970 3313 0 645 316 60 71 chr10 118543028 118543795 -27045493 - L1ME3A LINE L1 -206 5964 5200 412 300 53 88 chr10 118544029 118544349 -27044939 - MER102b DNA MER1_type 0 341 33 423 263 6 81 chr10 118544945 118545105 -27044183 - MER5B DNA MER1_type -30 148 1 308 59 39 39 chr10 118545946 118545997 -27043291 + L2 LINE L2 3262 3312 -1 755 298 85 78 chr10 118546344 118547002 -27042286 + MLT2F LTR ERVL 1 663 0 291 331 25 19 chr10 118547005 118547165 -27042123 + ERVL-F LTR ERVL 4 164 -5600 580 348 26 40 chr10 118547240 118547881 -27041407 + ERVL-F LTR ERVL 282 990 -4774 21 0 0 0 chr10 118547881 118547902 -27041386 + AT_rich Low_complexity Low_complexity 1 21 0 1590 116 35 0 chr10 118547905 118548165 -27041123 + AluSp SINE Alu 44 311 0 584 293 66 68 chr10 118548399 118548870 -27040418 + L1MCb LINE L1 -136 333 -5574 2191 281 87 34 chr10 118549109 118550791 -27038497 + L1MCb LINE L1 432 2204 -4222 25 31 0 0 chr10 118550830 118550862 -27038426 + AT_rich Low_complexity Low_complexity 1 32 0 1510 220 30 14 chr10 118550863 118551265 -27038023 + L1ME2 LINE L1 5451 5865 -299 279 200 82 0 chr10 118551232 118551317 -27037971 + L1MC3 LINE L1 7005 7096 -689 * 268 258 0 15 chr10 118551365 118551431 -27037857 + MLT1F1 LTR MaLR 47 111 -456 1758 202 79 15 chr10 118551431 118551837 -27037451 + L1MC3 LINE L1 7177 7608 -177 373 246 135 19 chr10 118551851 118552119 -27037169 + L1MCb LINE L1 2318 2669 -3938 426 347 36 18 chr10 118552175 118552397 -27036891 - MIR SINE MIR -11 251 26 578 216 9 0 chr10 118552654 118552770 -27036518 - FLAM_A SINE Alu -14 119 3 270 342 60 13 chr10 118552805 118552954 -27036334 - MIR3 SINE MIR -11 197 42 2711 16 0 3 chr10 118553119 118553424 -27035864 + AluY SINE Alu 1 304 -7 401 195 0 0 chr10 118553424 118553501 -27035787 - L1PB4 LINE L1 -19 6137 6061 2945 98 22 22 chr10 118554378 118554839 -27034449 - L1PA10 LINE L1 -5 6163 5703 424 285 46 121 chr10 118555586 118555976 -27033312 - LTR67 LTR ERVL -5 552 192 1046 224 93 47 chr10 118556369 118556683 -27032605 + MLT1A1 LTR MaLR 1 334 -31 1672 160 29 47 chr10 118556683 118557026 -27032262 - MER44D DNA MER2_type -2 607 1 1046 224 93 47 chr10 118557026 118557054 -27032234 + MLT1A1 LTR MaLR 334 359 -6 225 0 0 0 chr10 118557477 118557502 -27031786 + (CA)n Simple_repeat Simple_repeat 1 25 0 339 25 0 0 chr10 118558203 118558243 -27031045 + (CA)n Simple_repeat Simple_repeat 2 41 0 451 321 43 14 chr10 118558557 118558766 -27030522 - MLT1L LTR MaLR -2 613 399 2194 22 4 22 chr10 118558964 118559238 -27030050 + L1PA2 LINE L1 5885 6153 -2 1504 199 21 3 chr10 118560614 118560941 -27028347 - L1MB3 LINE L1 -1 6182 5850 246 359 26 0 chr10 118561846 118561924 -27027364 - MIR SINE MIR -182 80 1 2104 261 113 16 chr10 118562559 118563146 -27026142 + L1MC4 LINE L1 6449 6977 -1065 1883 152 3 13 chr10 118563146 118563461 -27025827 + AluJb SINE Alu 1 312 0 2104 261 113 16 chr10 118563461 118564184 -27025104 + L1MC4 LINE L1 6977 7896 -146 494 198 10 0 chr10 118564221 118564317 -27024971 - Tigger7 DNA MER2_type -1 2486 2390 * 1279 179 48 24 chr10 118564316 118564568 -27024720 - Tigger7 DNA MER2_type -466 267 10 353 275 46 38 chr10 118564585 118564716 -27024572 + L1MC4 LINE L1 7911 8042 0 771 301 96 40 chr10 118565660 118566086 -27023202 + MLT1E LTR MaLR 1 450 -143 32 43 0 0 chr10 118566557 118566603 -27022685 + AT_rich Low_complexity Low_complexity 1 46 0 189 214 0 0 chr10 118567051 118567093 -27022195 + (CATATA)n Simple_repeat Simple_repeat 4 45 0 4811 158 59 8 chr10 118567235 118568685 -27020603 + L1MA8 LINE L1 4777 6288 -3 380 326 77 14 chr10 118569062 118569283 -27020005 - MIR SINE MIR 0 262 28 365 291 26 98 chr10 118570019 118570253 -27019035 + MIR SINE MIR 36 252 -10 264 270 103 40 chr10 118570679 118570805 -27018483 + MIR3 SINE MIR 60 193 -15 242 278 28 0 chr10 118571035 118571107 -27018181 + MLT1J2 LTR MaLR 263 336 -114 240 264 0 0 chr10 118572122 118572209 -27017079 + G-rich Low_complexity Low_complexity 2 88 0 239 170 64 0 chr10 118572455 118572502 -27016786 + CT-rich Low_complexity Low_complexity 5 54 0 259 333 81 16 chr10 118572623 118572746 -27016542 - MIR SINE MIR -59 149 19 226 354 88 6 chr10 118573269 118573450 -27015838 - LTR16A LTR ERVL -23 427 232 187 309 25 12 chr10 118573991 118574072 -27015216 - MIR SINE MIR -93 115 34 2956 93 25 16 chr10 118574098 118574538 -27014750 - MLT2A1 LTR ERVL 0 444 1 10806 66 2 9 chr10 118574538 118575986 -27013302 - HERVL-A1 LTR ERVL 0 5654 4217 7684 64 15 6 chr10 118575983 118577005 -27012283 - HERVL-A1 LTR ERVL -1561 4093 3063 * 2627 101 77 7 chr10 118577019 118577067 -27012221 - MLT2A1 LTR ERVL 0 444 401 540 45 0 0 chr10 118577067 118577134 -27012154 + (CA)n Simple_repeat Simple_repeat 2 68 0 2627 101 77 7 chr10 118577134 118577500 -27011788 - MLT2A1 LTR ERVL -43 401 1 229 355 13 0 chr10 118578054 118578130 -27011158 + L2 LINE L2 3201 3277 -36 1745 124 43 122 chr10 118578205 118578600 -27010688 - THE1B LTR MaLR 0 364 1 24 32 0 0 chr10 118578920 118578951 -27010337 + AT_rich Low_complexity Low_complexity 1 31 0 278 273 62 55 chr10 118579665 118579793 -27009495 - L2 LINE L2 -1 3312 3184 248 239 23 57 chr10 118579794 118579882 -27009406 + GA-rich Low_complexity Low_complexity 3 87 0 290 266 75 0 chr10 118579971 118580065 -27009223 - MIR SINE MIR -42 220 120 207 161 0 0 chr10 118580075 118580113 -27009175 + (CAA)n Simple_repeat Simple_repeat 1 38 0 455 253 94 61 chr10 118580149 118580442 -27008846 - MIR SINE MIR -23 185 10 294 106 0 0 chr10 118580813 118580860 -27008428 + (TG)n Simple_repeat Simple_repeat 1 47 0 214 342 61 9 chr10 118581114 118581228 -27008060 - MIR SINE MIR -90 172 53 316 261 23 0 chr10 118581353 118581441 -27007847 + MER94 DNA DNA 4 93 -41 372 345 17 0 chr10 118581651 118581770 -27007518 + L2 LINE L2 3150 3270 -2 1905 98 0 0 chr10 118581964 118582210 -27007078 - AluSq SINE Alu -9 304 59 184 330 57 38 chr10 118582446 118582552 -27006736 + MIR3 SINE MIR 4 111 -97 690 171 50 0 chr10 118583885 118584025 -27005263 - MLT1B LTR MaLR -4 386 240 199 320 111 46 chr10 118584516 118584669 -27004619 - MIR SINE MIR -6 256 94 245 114 51 2 chr10 118584669 118584733 -27004555 - MLT2B1 LTR ERVL 0 520 451 204 40 0 0 chr10 118584733 118584758 -27004530 + (AATAG)n Simple_repeat Simple_repeat 5 29 0 2085 201 46 29 chr10 118584759 118585237 -27004051 - MLT2B1 LTR ERVL -34 486 1 211 318 12 59 chr10 118585240 118585325 -27003963 - MIR SINE MIR -112 96 16 7455 34 1 0 chr10 118586104 118587253 -27002035 + L1PA4 LINE L1 5029 6178 0 608 264 130 14 chr10 118588180 118588396 -27000892 - MIR SINE MIR -6 256 16 2062 154 0 0 chr10 118589004 118589315 -26999973 + AluSx SINE Alu 1 311 -1 322 237 65 11 chr10 118590344 118590437 -26998851 + MIR3 SINE MIR 87 184 -24 180 176 0 0 chr10 118592477 118592511 -26996777 + (CATA)n Simple_repeat Simple_repeat 2 35 0 344 70 0 18 chr10 118593521 118593578 -26995710 + (TTTA)n Simple_repeat Simple_repeat 2 57 0 1865 130 3 41 chr10 118593580 118593873 -26995415 - AluSx SINE Alu -30 282 1 190 306 35 81 chr10 118595202 118595375 -26993913 + L3 LINE CR1 1378 1542 -35 419 284 104 18 chr10 118595436 118595593 -26993695 - MIR3 SINE MIR -64 144 15 286 245 32 32 chr10 118596137 118596231 -26993057 + CT-rich Low_complexity Low_complexity 3 96 0 297 75 0 0 chr10 118596310 118596350 -26992938 + (CAAAA)n Simple_repeat Simple_repeat 3 42 0 2000 130 31 57 chr10 118596388 118596773 -26992515 + THE1C LTR MaLR 1 375 0 553 333 41 0 chr10 118596893 118597088 -26992200 - MIR SINE MIR -19 243 41 293 326 45 54 chr10 118597442 118597663 -26991625 - MIR SINE MIR -22 240 22 285 250 0 0 chr10 118600346 118600361 -26988927 + MER3 DNA MER1_type 33 47 -162 892 189 30 30 chr10 118600361 118600562 -26988726 - MER3 DNA MER1_type 0 209 9 474 304 14 0 chr10 118601700 118601848 -26987440 - MIR SINE MIR -3 259 110 994 185 54 58 chr10 118601850 118601930 -26987358 - Tigger2 DNA MER2_type 0 2718 2639 5938 18 0 0 chr10 118601930 118602605 -26986683 + L1PA3 LINE L1 5481 6155 0 994 185 54 58 chr10 118602605 118602783 -26986505 - Tigger2 DNA MER2_type -79 2639 2461 3923 167 42 7 chr10 118602828 118603566 -26985722 - Tigger2 DNA MER2_type -1953 765 2 293 346 10 0 chr10 118603570 118603671 -26985617 - MIR SINE MIR -156 106 5 273 341 11 11 chr10 118604661 118604752 -26984536 - L2 LINE L2 -18 3254 3164 1788 146 3 58 chr10 118605701 118606036 -26983252 - AluSg SINE Alu 0 319 1 3084 187 75 38 chr10 118606544 118607165 -26982123 - L1MC1 LINE L1 -6 6327 5664 2302 109 0 0 chr10 118607165 118607458 -26981830 + AluSp SINE Alu 3 295 -18 3084 187 75 38 chr10 118607458 118607685 -26981603 - L1MC1 LINE L1 -669 5664 5447 1678 213 3 11 chr10 118607717 118608083 -26981205 + MLT1A1 LTR MaLR 3 365 0 208 267 0 17 chr10 118609101 118609161 -26980127 - L2 LINE L2 -2262 1052 994 243 0 0 0 chr10 118610044 118610071 -26979217 + (CA)n Simple_repeat Simple_repeat 1 27 0 375 83 0 0 chr10 118610150 118610210 -26979078 + (TAAA)n Simple_repeat Simple_repeat 1 60 0 339 286 128 56 chr10 118610680 118610984 -26978304 - L1M2 LINE L1 -5685 1164 839 1310 231 25 3 chr10 118612307 118612666 -26976622 - L1MC3 LINE L1 -1140 6645 6279 271 240 10 10 chr10 118612673 118612773 -26976515 + (TA)n Simple_repeat Simple_repeat 1 100 0 650 291 12 18 chr10 118614216 118614381 -26974907 + MER58A DNA MER1_type 3 166 0 2375 134 5 11 chr10 118614381 118614755 -26974533 - THE1C LTR MaLR -2 373 2 9675 121 42 37 chr10 118614756 118616316 -26972972 - THE1C-int LTR MaLR -13 1567 1 2237 106 86 11 chr10 118616316 118616665 -26972623 - THE1C LTR MaLR 0 375 1 232 151 94 57 chr10 118616666 118616719 -26972569 + MER58 DNA MER1_type 2362 2416 -4 225 220 18 147 chr10 118616780 118616889 -26972399 + L2 LINE L2 3177 3271 -42 298 258 175 8 chr10 118618511 118618631 -26970657 + MIR SINE MIR 8 147 -115 2183 184 6 0 chr10 118619911 118620269 -26969019 - MLT2B1 LTR ERVL -159 361 2 214 197 26 0 chr10 118621203 118621249 -26968039 + L2 LINE L2 3212 3299 -14 817 220 24 31 chr10 118621604 118621859 -26967429 - MLT2D LTR ERVL -159 255 3 180 176 0 0 chr10 118621861 118621895 -26967393 + (CACCAT)n Simple_repeat Simple_repeat 5 38 0 339 351 9 18 chr10 118622433 118622544 -26966744 - L2 LINE L2 -22 3291 3182 1277 194 49 91 chr10 118622654 118623040 -26966248 - MLT1A2 LTR MaLR -4 370 1 206 280 0 0 chr10 118623206 118623256 -26966032 + L2 LINE L2 3262 3311 -2 312 314 81 0 chr10 118624355 118624479 -26964809 - MIR SINE MIR -38 224 91 1371 143 0 14 chr10 118624534 118624743 -26964545 + THE1C LTR MaLR 5 210 -165 7261 115 5 3 chr10 118624743 118625784 -26963504 + THE1C-int LTR MaLR 538 1580 0 1832 142 52 35 chr10 118625787 118626153 -26963135 + THE1C LTR MaLR 4 375 0 1426 216 22 43 chr10 118626306 118626677 -26962611 - MLT1A1 LTR MaLR -2 363 1 1975 149 3 0 chr10 118627319 118627639 -26961649 - AluSx SINE Alu 0 321 1 22 0 0 0 chr10 118627733 118627755 -26961533 + AT_rich Low_complexity Low_complexity 1 22 0 5435 141 25 51 chr10 118627865 118628743 -26960545 - L1PB1 LINE L1 0 6867 6062 236 30 30 0 chr10 118628743 118628776 -26960512 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 5435 141 25 51 chr10 118628776 118629474 -26959814 - L1PB1 LINE L1 -805 6062 5347 3674 128 15 7 chr10 118629472 118630655 -26958633 - L1PB1 LINE L1 -3328 3534 2297 * 2136 109 10 7 chr10 118631384 118631688 -26957600 + AluSq SINE Alu 7 311 -2 270 0 0 0 chr10 118632194 118632224 -26957064 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 2179 154 16 10 chr10 118632513 118632896 -26956392 + L1MA6 LINE L1 5398 5782 -509 634 190 49 7 chr10 118632938 118633080 -26956208 + L1MA6 LINE L1 5875 6022 -278 2324 45 0 0 chr10 118633102 118633389 -26955899 - L1PA4 LINE L1 -3 6152 5866 1710 30 0 0 chr10 118633389 118633589 -26955699 + L1PA4 LINE L1 5662 5861 -294 1017 193 75 2 chr10 118633569 118633795 -26955493 + L1MA8 LINE L1 5988 6245 -67 * 393 22 0 0 chr10 118633795 118633841 -26955447 + (TA)n Simple_repeat Simple_repeat 1 46 0 1017 193 75 2 chr10 118633841 118633913 -26955375 + L1MA8 LINE L1 6245 6310 -2 550 209 30 0 chr10 118636273 118636407 -26952881 + L1M4 LINE L1 35 172 -6370 2238 270 68 41 chr10 118636413 118637268 -26952020 + L1M4 LINE L1 1063 1893 -4753 1849 115 40 102 chr10 118637268 118637668 -26951620 + THE1C LTR MaLR 1 375 0 2238 270 68 41 chr10 118637668 118638353 -26950935 + L1M4 LINE L1 1893 2762 -3884 1863 152 0 17 chr10 118638354 118638651 -26950637 + AluJb SINE Alu 1 292 -20 23 33 0 0 chr10 118638712 118638742 -26950546 + AT_rich Low_complexity Low_complexity 1 30 0 1992 251 53 14 chr10 118638786 118639572 -26949716 + L1M4 LINE L1 2823 3639 -3005 193 304 0 0 chr10 118639614 118639660 -26949628 + MER5B DNA MER1_type 132 177 -1 610 127 8 25 chr10 118640952 118641070 -26948218 + (GGAAA)n Simple_repeat Simple_repeat 3 118 0 252 0 0 0 chr10 118641441 118641469 -26947819 + (TTTTA)n Simple_repeat Simple_repeat 3 30 0 5318 43 0 6 chr10 118641478 118642129 -26947159 - L1PA3 LINE L1 0 6155 5509 6427 31 6 0 chr10 118642129 118643078 -26946210 + L1P1 LINE L1 4624 5583 -572 2431 137 25 55 chr10 118643410 118643849 -26945439 - MSTB1 LTR MaLR -6 426 1 206 269 43 43 chr10 118644543 118644636 -26944652 + MIR SINE MIR 130 222 -40 293 338 27 14 chr10 118645797 118645945 -26943343 + MIR SINE MIR 8 157 -105 1617 182 6 26 chr10 118646434 118646747 -26942541 + AluJb SINE Alu 3 309 -3 25 51 0 0 chr10 118647203 118647242 -26942046 + AT_rich Low_complexity Low_complexity 1 39 0 232 328 26 17 chr10 118648048 118648164 -26941124 + L2 LINE L2 2728 2844 -470 28 0 0 0 chr10 118648347 118648375 -26940913 + AT_rich Low_complexity Low_complexity 1 28 0 491 273 30 30 chr10 118648490 118648622 -26940666 + L2 LINE L2 3180 3311 -2 41041 67 5 0 chr10 118648872 118654988 -26934300 + L1PA5 LINE L1 11 6154 0 1699 182 3 3 chr10 118656203 118656511 -26932777 + AluJo SINE Alu 5 312 0 243 103 0 0 chr10 118657050 118657089 -26932199 + (TTGG)n Simple_repeat Simple_repeat 2 40 0 274 285 45 119 chr10 118657831 118658163 -26931125 + LTR16B LTR ERVL 21 300 -164 1288 185 33 15 chr10 118658362 118658632 -26930656 - L1MC3 LINE L1 -1167 6618 6344 4983 224 58 14 chr10 118658670 118659920 -26929368 - L1MC3 LINE L1 -1164 7119 5815 3562 211 56 23 chr10 118659924 118660993 -26928295 - L1MB5 LINE L1 0 6174 5072 654 258 59 3 chr10 118660999 118661286 -26928002 - L1MC3 LINE L1 -829 5815 5513 268 276 35 35 chr10 118661262 118661490 -26927798 - L1MC3 LINE L1 -3533 3111 2884 * 238 303 49 0 chr10 118661485 118661607 -26927681 - L1MC3 LINE L1 -4814 1830 1703 * 499 312 75 20 chr10 118661609 118661890 -26927398 - L1MC3 LINE L1 -4972 1570 1299 225 239 15 0 chr10 118661892 118661959 -26927329 - L1MC3 LINE L1 -5294 1340 1273 252 174 43 43 chr10 118662643 118662712 -26926576 - MER5B DNA MER1_type -105 73 5 1127 165 119 12 chr10 118662960 118663203 -26926085 - THE1C LTR MaLR 0 375 107 4586 126 22 6 chr10 118663240 118663924 -26925364 + THE1C-int LTR MaLR 884 1578 -2 1890 152 58 22 chr10 118663929 118664291 -26924997 + THE1C LTR MaLR 1 375 0 214 295 0 32 chr10 118665384 118665479 -26923809 + T-rich Low_complexity Low_complexity 2 93 0 1970 181 110 13 chr10 118665503 118666055 -26923233 + MER39 LTR ERV1 1 666 -41 248 111 22 0 chr10 118666276 118666321 -26922967 + CT-rich Low_complexity Low_complexity 1 46 0 322 227 2 41 chr10 118666912 118667052 -26922236 - L1MD3 LINE L1 -49 7923 7626 292 365 16 0 chr10 118667297 118667423 -26921865 + LTR16A LTR ERVL 125 252 -198 23 0 0 0 chr10 118667629 118667652 -26921636 + AT_rich Low_complexity Low_complexity 1 23 0 243 322 0 0 chr10 118668607 118668666 -26920622 - MIR SINE MIR -105 103 45 188 411 46 0 chr10 118668856 118669031 -26920257 - L2 LINE L2 -547 2767 2585 518 311 62 16 chr10 118669087 118669331 -26919957 - LTR16A LTR ERVL -97 353 99 917 156 39 161 chr10 118669459 118669862 -26919426 + MER4C LTR ERV1 151 465 0 261 348 166 12 chr10 118669862 118670109 -26919179 - L2 LINE L2 -1329 1985 1701 234 337 0 50 chr10 118670566 118670666 -26918622 - MIR SINE MIR -62 146 54 456 19 0 0 chr10 118670725 118670778 -26918510 + (CA)n Simple_repeat Simple_repeat 2 54 0 2317 154 5 5 chr10 118670823 118671231 -26918057 + MER4D LTR ERV1 3 410 -462 683 150 8 0 chr10 118671231 118671351 -26917937 + MER4D LTR ERV1 288 408 -464 1907 171 93 57 chr10 118671352 118671900 -26917388 + LTR49 LTR ERV1 3 570 -25 2744 136 22 0 chr10 118671930 118672387 -26916901 + MER4D LTR ERV1 437 903 0 2799 188 85 8 chr10 118672459 118673118 -26916170 + MER67C LTR ERV1 1 710 0 39 38 0 0 chr10 118673397 118673450 -26915838 + AT_rich Low_complexity Low_complexity 1 53 0 312 279 71 41 chr10 118673450 118673775 -26915513 + HAL1b LINE L1 247 756 -592 9250 98 11 1 chr10 118673775 118675935 -26913353 + L1PA8 LINE L1 3985 6172 0 312 279 71 41 chr10 118675935 118676021 -26913267 + HAL1b LINE L1 756 838 -510 259 258 121 8 chr10 118676049 118676173 -26913115 + HAL1b LINE L1 975 1112 -236 316 329 104 51 chr10 118676536 118676852 -26912436 - L1MC4a LINE L1 -1795 6013 5681 33742 95 8 32 chr10 118676936 118682327 -26906961 + L1P LINE L1 11 5273 -873 227 252 10 87 chr10 118684676 118684779 -26904509 + L1M4 LINE L1 4062 4156 -1990 330 274 67 124 chr10 118685113 118685177 -26904111 + L2 LINE L2 2264 2330 -984 664 263 0 24 chr10 118685177 118685390 -26903898 + MER3 DNA MER1_type 2 209 0 330 274 67 124 chr10 118685390 118685617 -26903671 + L2 LINE L2 2330 2514 -800 1591 118 66 0 chr10 118685617 118685889 -26903399 - L1PB3 LINE L1 0 6154 5865 330 274 67 124 chr10 118685889 118686118 -26903170 + L2 LINE L2 2514 2755 -559 2047 154 66 57 chr10 118686210 118686698 -26902590 + LTR22B LTR ERVK 1 492 0 253 348 101 7 chr10 118686870 118687008 -26902280 + MIR SINE MIR 102 252 -10 1133 181 157 70 chr10 118687011 118687425 -26901863 + LTR7 LTR ERV1 1 450 0 697 115 0 0 chr10 118687425 118687529 -26901759 + HERVH LTR ERV1 1 104 -7609 * 5742 142 10 5 chr10 118687527 118688496 -26900792 + HERVH LTR ERV1 1352 2325 -5388 1520 128 46 11 chr10 118688496 118688777 -26900511 + LTR7 LTR ERV1 160 450 0 2750 239 68 21 chr10 118688876 118689668 -26899620 - MER21B LTR ERV1 -16 847 19 270 246 0 15 chr10 118689701 118689766 -26899522 - MER21B LTR ERV1 -795 68 5 980 171 15 15 chr10 118690592 118690791 -26898497 + MLT2C1 LTR ERVL 1 199 -198 1927 265 62 17 chr10 118691271 118692081 -26897207 - L1MB8 LINE L1 -10 6168 5323 327 25 0 0 chr10 118693457 118693497 -26895791 + (TG)n Simple_repeat Simple_repeat 1 40 0 2049 116 3 10 chr10 118695318 118695612 -26893676 + AluSc SINE Alu 3 294 -15 1547 202 42 16 chr10 118696570 118696951 -26892337 - L1MA9 LINE L1 0 6312 5922 276 315 0 87 chr10 118697352 118697479 -26891809 + L2 LINE L2 3137 3252 -20 522 316 63 5 chr10 118697600 118697806 -26891482 - MLT2F LTR ERVL -438 225 8 1449 174 48 61 chr10 118698574 118698885 -26890403 - AluJo SINE Alu -5 307 1 487 303 77 27 chr10 118699967 118700188 -26889100 + MLT1K LTR MaLR 34 265 -323 356 237 46 38 chr10 118700286 118700377 -26888911 + MLT1K LTR MaLR 394 488 -100 2167 247 68 92 chr10 118700377 118700500 -26888788 - MER50 LTR ERV1 0 734 610 1815 131 57 3 chr10 118700500 118700782 -26888506 + AluSc SINE Alu 1 297 -12 2167 247 68 92 chr10 118700782 118701410 -26887878 - MER50 LTR ERV1 -124 610 1 356 237 46 38 chr10 118701410 118701449 -26887839 + MLT1K LTR MaLR 488 525 -63 1432 192 114 82 chr10 118701457 118701545 -26887743 - MLT1D LTR MaLR 0 505 421 2138 147 0 0 chr10 118701545 118701857 -26887431 - AluSx SINE Alu 0 312 1 1432 192 114 82 chr10 118701857 118701967 -26887321 - MLT1D LTR MaLR -84 421 316 2682 162 50 26 chr10 118701967 118702548 -26886740 + LTR49 LTR ERV1 1 595 0 1432 192 114 82 chr10 118702548 118702837 -26886451 - MLT1D LTR MaLR -189 316 1 1887 156 40 0 chr10 118703230 118703551 -26885737 - LTR28 LTR ERV1 -686 334 1 232 357 43 7 chr10 118704277 118704417 -26884871 - MIR SINE MIR -72 190 46 300 324 151 32 chr10 118704920 118705105 -26884183 + MIR SINE MIR 24 230 -32 191 250 0 0 chr10 118705317 118705361 -26883927 - MIR SINE MIR -65 197 154 514 357 25 16 chr10 118706234 118706478 -26882810 - MIR SINE MIR -14 248 3 2801 181 37 59 chr10 118707238 118707945 -26881343 - LTR8 LTR ERV1 0 691 1 3306 125 9 75 chr10 118708421 118708866 -26880422 + MER4A LTR ERV1 1 393 -207 2185 87 17 13 chr10 118708866 118709164 -26880124 - AluY SINE Alu -12 299 1 3306 125 9 75 chr10 118709164 118709360 -26879928 + MER4A LTR ERV1 393 600 0 351 309 53 64 chr10 118709452 118709640 -26879648 + MIR3 SINE MIR 13 198 -10 250 272 5 163 chr10 118710477 118710661 -26878627 + MER91B DNA MER1_type 4 158 -32 207 287 117 49 chr10 118711083 118711198 -26878090 + MIR SINE MIR 24 143 -65 708 292 157 34 chr10 118711306 118711867 -26877421 + LTR50 LTR ERVL 1 630 -165 402 289 42 78 chr10 118712321 118712605 -26876683 - Charlie8 DNA MER1_type -2142 275 2 1740 197 19 0 chr10 118713543 118713918 -26875370 - L1MB1 LINE L1 0 6168 5787 432 0 0 0 chr10 118714052 118714100 -26875188 + (TA)n Simple_repeat Simple_repeat 1 48 0 1165 188 12 0 chr10 118714186 118714426 -26874862 - L1MB1 LINE L1 -450 5718 5476 435 241 31 6 chr10 118714447 118714609 -26874679 + (TA)n Simple_repeat Simple_repeat 1 166 0 1148 254 18 0 chr10 118714612 118714950 -26874338 - L1MB1 LINE L1 -2391 3755 3412 23 0 0 0 chr10 118714957 118714980 -26874308 + AT_rich Low_complexity Low_complexity 1 23 0 510 77 77 18 chr10 118714986 118715155 -26874133 + (TA)n Simple_repeat Simple_repeat 2 180 0 279 35 52 35 chr10 118715172 118715230 -26874058 + (TATAA)n Simple_repeat Simple_repeat 4 62 0 631 78 28 50 chr10 118715231 118715410 -26873878 + (TTATA)n Simple_repeat Simple_repeat 5 179 0 275 86 69 0 chr10 118715416 118715474 -26873814 + (TA)n Simple_repeat Simple_repeat 2 63 0 260 234 31 0 chr10 118715474 118715538 -26873750 - AluSp SINE Alu -107 196 131 27 0 0 0 chr10 118715557 118715584 -26873704 + AT_rich Low_complexity Low_complexity 1 27 0 189 0 0 0 chr10 118715584 118715605 -26873683 + (GA)n Simple_repeat Simple_repeat 2 22 0 536 236 9 0 chr10 118715605 118715715 -26873573 - AluJb SINE Alu -200 112 2 466 285 181 23 chr10 118717886 118718240 -26871048 - L2 LINE L2 -45 3268 2859 635 295 86 25 chr10 118718535 118718976 -26870312 - L1MC4 LINE L1 -478 7564 7097 192 152 0 0 chr10 118719463 118719496 -26869792 + (TG)n Simple_repeat Simple_repeat 2 34 0 4861 171 20 11 chr10 118719538 118720043 -26869245 - L1MA7 LINE L1 0 6291 5773 216 0 0 0 chr10 118720043 118720067 -26869221 + (TG)n Simple_repeat Simple_repeat 2 25 0 4861 171 20 11 chr10 118720067 118720457 -26868831 - L1MA7 LINE L1 -518 5773 5388 182 37 37 0 chr10 118720834 118720861 -26868427 + (CAA)n Simple_repeat Simple_repeat 2 29 0 25 31 0 0 chr10 118721506 118721538 -26867750 + AT_rich Low_complexity Low_complexity 1 32 0 258 232 43 0 chr10 118721770 118721839 -26867449 + GA-rich Low_complexity Low_complexity 3 74 0 1878 130 0 17 chr10 118721846 118722139 -26867149 + AluSx SINE Alu 23 310 -2 392 266 149 26 chr10 118723536 118723690 -26865598 - MIR SINE MIR -10 252 80 432 304 85 30 chr10 118724868 118725069 -26864219 + MIR SINE MIR 23 234 -28 185 0 40 0 chr10 118725182 118725207 -26864081 + (CAAAC)n Simple_repeat Simple_repeat 4 29 0 321 26 0 0 chr10 118726506 118726544 -26862744 + (TA)n Simple_repeat Simple_repeat 2 39 0 280 338 44 44 chr10 118726678 118726838 -26862450 + MIR SINE MIR 8 167 -95 351 0 0 0 chr10 118727046 118727085 -26862203 + (CA)n Simple_repeat Simple_repeat 2 40 0 556 224 179 0 chr10 118729034 118729213 -26860075 + MLT2C1 LTR ERVL 168 378 -19 36 40 0 0 chr10 118729225 118729275 -26860013 + AT_rich Low_complexity Low_complexity 1 50 0 249 91 0 0 chr10 118729277 118729310 -26859978 + MLT2C1 LTR ERVL 365 397 0 1984 133 3 0 chr10 118729722 118730007 -26859281 - AluSx SINE Alu -26 286 1 284 264 77 22 chr10 118731153 118731244 -26858044 + LTR50 LTR ERVL 472 567 -228 500 304 167 13 chr10 118731265 118731577 -26857711 + LTR50 LTR ERVL 428 787 -8 14419 108 7 5 chr10 118731577 118734602 -26854686 - L1PA8 LINE L1 -5 6167 3181 5742 116 4 19 chr10 118734752 118736031 -26853257 + L1PA14 LINE L1 4897 6161 0 582 334 51 11 chr10 118736182 118736466 -26852822 + L1MD1 LINE L1 106 324 -6219 680 267 22 4 chr10 118736466 118736691 -26852597 + L1MD1 LINE L1 4875 5103 -1437 620 236 12 85 chr10 118736693 118736858 -26852430 + FRAM SINE Alu 1 151 -25 956 274 24 31 chr10 118736936 118737355 -26851933 + L1MD1 LINE L1 5118 5533 -1007 250 254 0 15 chr10 118737411 118737478 -26851810 + MLT1F1 LTR MaLR 42 107 -460 1896 238 39 38 chr10 118737489 118737763 -26851525 + L1MC3 LINE L1 7203 7475 -310 1472 211 13 3 chr10 118737763 118738061 -26851227 + AluJb SINE Alu 5 305 -7 1896 238 39 38 chr10 118738061 118738344 -26850944 + L1MC3 LINE L1 7475 7761 -24 1985 204 6 39 chr10 118738380 118738515 -26850773 + L1MD1 LINE L1 5558 5696 -1057 2198 118 0 10 chr10 118738515 118738811 -26850477 + AluSc SINE Alu 1 293 -16 1985 204 6 39 chr10 118738811 118739241 -26850047 + L1MD1 LINE L1 5696 6098 -655 849 180 90 5 chr10 118739239 118739450 -26849838 + L1MD1 LINE L1 6402 6630 -6 * 1759 179 7 0 chr10 118739477 118739767 -26849521 - AluJb SINE Alu -20 292 1 485 356 46 40 chr10 118741560 118741886 -26847402 - L3 LINE CR1 -42 1535 1208 265 286 0 0 chr10 118742286 118742356 -26846932 - MIR SINE MIR -107 155 86 334 264 108 14 chr10 118742485 118742633 -26846655 + Charlie8 DNA MER1_type 88 249 -2168 261 0 0 0 chr10 118743221 118743250 -26846038 + (TG)n Simple_repeat Simple_repeat 2 30 0 220 330 23 11 chr10 118743717 118743805 -26845483 + MER5A DNA MER1_type 63 151 -38 357 218 38 83 chr10 118743931 118744064 -26845224 + L1MB7 LINE L1 6058 6184 0 289 148 0 0 chr10 118744587 118744641 -26844647 - L1MA4A LINE L1 -6 6297 6244 1751 207 34 11 chr10 118744925 118745282 -26844006 - MLT1A1 LTR MaLR 0 365 1 2249 100 3 7 chr10 118745319 118745619 -26843669 - AluY SINE Alu -12 299 1 335 314 99 21 chr10 118746418 118746609 -26842679 - L2 LINE L2 -557 2757 2552 381 22 0 0 chr10 118747258 118747304 -26841984 + (TG)n Simple_repeat Simple_repeat 2 47 0 442 276 58 23 chr10 118748812 118748986 -26840302 + L1ME3A LINE L1 5974 6153 -17 369 198 0 0 chr10 118749079 118749160 -26840128 + (TCTA)n Simple_repeat Simple_repeat 2 82 0 691 280 55 3 chr10 118749966 118750273 -26839015 + L1ME3A LINE L1 5546 5868 -302 345 94 0 0 chr10 118750824 118750877 -26838411 - L1MC1 LINE L1 -5 6328 6276 1645 192 0 14 chr10 118750878 118751169 -26838119 + AluJb SINE Alu 1 287 -25 1420 102 5 5 chr10 118751295 118751492 -26837796 + AluSc SINE Alu 27 223 -86 2595 277 59 1 chr10 118751495 118752647 -26836641 + L1M2 LINE L1 4302 5524 -680 354 66 26 53 chr10 118752647 118752723 -26836565 + (GGGAA)n Simple_repeat Simple_repeat 1 74 0 1459 263 96 33 chr10 118752724 118753359 -26835929 + L1ME1 LINE L1 5486 6160 -6 2952 173 19 25 chr10 118754168 118754740 -26834548 + MER52A LTR ERV1 1187 1755 0 2094 215 12 72 chr10 118754803 118755371 -26833917 + MER74A LTR ERVL 1 534 -24 382 377 82 0 chr10 118756565 118756772 -26832516 + MIR SINE MIR 21 244 -18 186 311 22 0 chr10 118757394 118757439 -26831849 + L2 LINE L2 3207 3252 -20 407 310 23 58 chr10 118757772 118758033 -26831255 + L1MCc LINE L1 19 270 -6153 253 336 74 34 chr10 118759048 118759197 -26830091 - L2 LINE L2 -563 2751 2597 7817 225 59 41 chr10 118759455 118760123 -26829165 - L1MCa LINE L1 -3243 3183 2529 1570 163 78 28 chr10 118760123 118760480 -26828808 - THE1C LTR MaLR 0 375 1 9332 126 35 43 chr10 118760480 118762073 -26827215 - THE1C-int LTR MaLR 0 1580 1 1793 156 55 27 chr10 118762073 118762438 -26826850 - THE1C LTR MaLR 0 375 1 7817 225 59 41 chr10 118762438 118763037 -26826251 - L1MCa LINE L1 -3897 2529 1942 1791 102 49 23 chr10 118763037 118763342 -26825946 - L1MA1 LINE L1 -7 6295 5983 7817 225 59 41 chr10 118763342 118765180 -26824108 - L1MCa LINE L1 -4484 1942 25 32 0 0 0 chr10 118765549 118765581 -26823707 + AT_rich Low_complexity Low_complexity 1 32 0 357 271 10 0 chr10 118766032 118766128 -26823160 + MER103 DNA DNA 3 99 -67 493 94 90 0 chr10 118768126 118768371 -26820917 + (TA)n Simple_repeat Simple_repeat 1 267 0 2130 115 0 0 chr10 118768373 118768661 -26820627 - AluSx SINE Alu -24 288 1 1314 186 37 68 chr10 118769250 118769572 -26819716 + AluJb SINE Alu 1 312 0 209 351 18 0 chr10 118769894 118770008 -26819280 + MIR SINE MIR 66 181 -81 290 218 0 0 chr10 118770010 118770065 -26819223 + Tigger5 DNA MER2_type 1 55 -2268 * 417 164 14 14 chr10 118770033 118770106 -26819182 + Tigger5 DNA MER2_type 2250 2322 -1 207 297 0 16 chr10 118770111 118770175 -26819113 + MIR SINE MIR 200 262 0 1012 192 66 0 chr10 118770313 118770511 -26818777 + L1MCc LINE L1 577 787 -6156 1331 199 8 78 chr10 118770556 118770917 -26818371 + L1MCc LINE L1 944 1279 -5664 * 4046 198 30 23 chr10 118770914 118771734 -26817554 + L1MB3 LINE L1 4930 5953 -230 6377 127 29 17 chr10 118771734 118772729 -26816559 + LTR13 LTR ERVK 1 1007 0 4046 198 30 23 chr10 118772729 118772961 -26816327 + L1MB3 LINE L1 5953 6182 -1 239 268 0 18 chr10 118773123 118773179 -26816109 - L2 LINE L2 -4 3268 3214 21 0 0 0 chr10 118773224 118773245 -26816043 + AT_rich Low_complexity Low_complexity 1 21 0 204 215 31 15 chr10 118773310 118773375 -26815913 + T-rich Low_complexity Low_complexity 5 70 0 576 214 52 52 chr10 118773918 118774072 -26815216 - MIR SINE MIR -106 156 3 639 275 147 44 chr10 118774087 118774795 -26814493 - L1ME3A LINE L1 -1 6169 5353 1931 160 0 13 chr10 118774795 118775108 -26814180 - AluJo SINE Alu -3 309 1 639 275 147 44 chr10 118775108 118775218 -26814070 - L1ME3A LINE L1 -817 5353 5256 365 113 32 0 chr10 118775226 118775288 -26814000 - MADE1 DNA Mariner -16 64 1 305 293 43 17 chr10 118775292 118775408 -26813880 - L1ME3A LINE L1 -912 5234 5116 364 280 37 71 chr10 118775653 118776035 -26813253 - L1ME3A LINE L1 -1321 4825 4457 291 54 0 0 chr10 118776072 118776109 -26813179 + (TA)n Simple_repeat Simple_repeat 1 37 0 270 320 120 8 chr10 118777512 118777637 -26811651 + MIR SINE MIR 8 146 -116 184 348 29 14 chr10 118777720 118777789 -26811499 - L2 LINE L2 -4 3268 3199 234 254 15 0 chr10 118777806 118777873 -26811415 + (CAT)n Simple_repeat Simple_repeat 2 69 0 21 0 0 0 chr10 118777879 118777900 -26811388 + AT_rich Low_complexity Low_complexity 1 21 0 323 338 78 7 chr10 118778077 118778231 -26811057 + LTR16A LTR ERVL 79 243 -207 1000 288 59 27 chr10 118778765 118779171 -26810117 + HERV16 LTR ERVL 366 784 -4212 1240 153 0 35 chr10 118779280 118779508 -26809780 - AluJo SINE Alu -9 303 84 1363 372 44 5 chr10 118779766 118780425 -26808863 + HERV16 LTR ERVL 893 1577 -3419 608 275 116 40 chr10 118780470 118780746 -26808542 + HERV16 LTR ERVL 1688 1984 -3012 3928 85 6 0 chr10 118782223 118782753 -26806535 - L1PA8 LINE L1 -7 6165 5633 1246 210 17 52 chr10 118783912 118784085 -26805203 - AluJo SINE Alu -21 291 130 180 77 0 0 chr10 118784085 118784111 -26805177 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1246 210 17 52 chr10 118784111 118784228 -26805060 - AluJo SINE Alu -182 130 11 23 0 0 0 chr10 118784367 118784390 -26804898 + AT_rich Low_complexity Low_complexity 1 23 0 504 0 0 0 chr10 118784419 118784475 -26804813 + (TA)n Simple_repeat Simple_repeat 2 57 0 261 296 23 64 chr10 118785140 118785312 -26803976 + L3 LINE CR1 787 951 -626 271 308 31 17 chr10 118785396 118785555 -26803733 - MIR SINE MIR -32 230 1 180 0 0 0 chr10 118785612 118785632 -26803656 + (TAAAA)n Simple_repeat Simple_repeat 4 23 0 240 347 58 25 chr10 118785847 118785968 -26803320 + L3 LINE CR1 1340 1464 -113 182 388 41 18 chr10 118786723 118786893 -26802395 + L2 LINE L2 2497 2670 -644 1653 189 46 6 chr10 118787051 118787401 -26801887 + MLT1A1 LTR MaLR 1 364 -1 308 257 149 0 chr10 118789196 118789270 -26800018 + MLT1K LTR MaLR 81 165 -423 475 333 23 6 chr10 118789348 118789525 -26799763 + MLT1K LTR MaLR 269 448 -140 274 232 0 0 chr10 118790495 118790551 -26798737 - L1MC3 LINE L1 -523 7262 7207 237 257 81 27 chr10 118790569 118790643 -26798645 - MLT1F1 LTR MaLR -442 125 48 38 39 0 0 chr10 118790682 118790734 -26798554 + AT_rich Low_complexity Low_complexity 1 52 0 1332 178 48 7 chr10 118790734 118791027 -26798261 - L1MC3 LINE L1 -749 7036 6732 4846 45 0 0 chr10 118791033 118791615 -26797673 - L1PA3 LINE L1 -5 6150 5569 5513 27 12 3 chr10 118791615 118792618 -26796670 + L1P1 LINE L1 4718 5725 -430 3176 155 43 13 chr10 118792730 118793789 -26795499 - L1M2 LINE L1 -560 5740 4656 1277 203 76 73 chr10 118793796 118794205 -26795083 - MER66A LTR ERV1 -40 438 29 925 131 24 0 chr10 118794219 118794387 -26794901 - L1M2 LINE L1 -1488 4658 4487 878 302 117 58 chr10 118794475 118794972 -26794316 + MLT1K LTR MaLR 35 560 -28 6299 65 5 2 chr10 118795009 118795829 -26793459 - L1PA7 LINE L1 -11 6143 5322 1958 154 17 40 chr10 118796268 118796618 -26792670 - LTR3b LTR ERVK -1 499 158 7642 203 40 22 chr10 118796629 118799188 -26790100 - L1PA16 LINE L1 -122 6044 3441 * 15060 39 4 1 chr10 118799163 118801035 -26788253 - L1P LINE L1 -1331 4815 2939 7338 45 0 0 chr10 118801036 118802416 -26786872 + L1PA4 LINE L1 4778 6152 -3 4112 262 31 22 chr10 118802424 118804237 -26785051 - L1PA16 LINE L1 -2691 3455 1666 350 162 73 0 chr10 118804243 118804311 -26784977 + MSTA LTR MaLR 1 73 -355 1835 123 3 32 chr10 118805947 118806232 -26783056 - AluSc SINE Alu -4 305 29 468 263 92 13 chr10 118806645 118806797 -26782491 + MIR SINE MIR 21 184 -78 436 98 0 0 chr10 118807591 118807652 -26781636 + Alu SINE Alu 235 295 -15 1165 266 108 123 chr10 118809619 118810966 -26778322 - L1MDa LINE L1 -5202 1338 13 26 30 0 0 chr10 118811260 118811293 -26777995 + AT_rich Low_complexity Low_complexity 1 33 0 21 36 0 0 chr10 118811353 118811381 -26777907 + AT_rich Low_complexity Low_complexity 1 28 0 414 264 28 7 chr10 118811387 118811531 -26777757 + (TA)n Simple_repeat Simple_repeat 2 148 0 515 307 37 45 chr10 118811849 118812093 -26777195 - LTR16A1 LTR ERVL -165 292 51 1032 176 40 105 chr10 118812106 118812429 -26776859 + MLT1B LTR MaLR 3 304 -86 1750 166 152 0 chr10 118812682 118813050 -26776238 + MSTA LTR MaLR 1 424 -4 7734 177 25 74 chr10 118813050 118813952 -26775336 + MSTA-int LTR MaLR 5 950 -701 2127 150 33 25 chr10 118813952 118814313 -26774975 - THE1B LTR MaLR 0 364 1 10117 117 41 1 chr10 118814313 118815832 -26773456 - THE1B-int LTR MaLR 0 1580 1 7734 177 25 74 chr10 118815832 118816483 -26772805 + MSTA-int LTR MaLR 949 1468 -183 294 71 0 24 chr10 118815899 118815941 -26773347 - THE1B LTR MaLR -321 43 3 * 2093 125 6 26 chr10 118816483 118816796 -26772492 - AluSg SINE Alu -3 307 1 7734 177 25 74 chr10 118816796 118816972 -26772316 + MSTA-int LTR MaLR 1468 1651 0 2035 148 138 5 chr10 118816973 118817350 -26771938 + MSTA LTR MaLR 2 428 0 471 212 118 82 chr10 118818678 118818749 -26770539 - MIR SINE MIR -30 232 165 207 0 0 0 chr10 118818749 118818772 -26770516 + (CA)n Simple_repeat Simple_repeat 2 24 0 471 212 118 82 chr10 118818772 118818870 -26770418 - MIR SINE MIR -97 165 57 2363 99 0 6 chr10 118819041 118819355 -26769933 - AluSx SINE Alu 0 312 1 378 291 184 6 chr10 118819431 118819610 -26769678 - MIR SINE MIR -13 249 39 23 33 0 0 chr10 118820177 118820207 -26769081 + AT_rich Low_complexity Low_complexity 1 30 0 24 0 0 0 chr10 118820251 118820275 -26769013 + AT_rich Low_complexity Low_complexity 1 24 0 205 273 0 0 chr10 118820748 118820792 -26768496 + polypyrimidine Low_complexity Low_complexity 2 45 0 279 183 43 21 chr10 118821221 118821314 -26767974 + MER113 DNA MER1_type? 341 435 -86 356 281 88 47 chr10 118821322 118821493 -26767795 - MER5B DNA MER1_type 0 178 1 754 300 88 4 chr10 118821494 118821721 -26767567 + MIR SINE MIR 7 252 -10 192 97 0 0 chr10 118822085 118822116 -26767172 + (CAAAA)n Simple_repeat Simple_repeat 3 33 0 489 217 10 20 chr10 118822153 118822359 -26766929 + CT-rich Low_complexity Low_complexity 1 204 0 2561 68 9 3 chr10 118822680 118823018 -26766270 + L1PA7 LINE L1 5808 6147 -7 1152 188 5 5 chr10 118823033 118823257 -26766031 + MER95 LTR ERV 14 237 -194 955 166 51 11 chr10 118823262 118823437 -26765851 + AluJo SINE Alu 6 187 -125 1674 275 27 25 chr10 118823542 118823954 -26765334 - MLT1J2-int LTR MaLR -1141 594 179 2342 187 24 9 chr10 118823954 118824408 -26764880 + LOR1b LTR ERV1 1 461 0 1674 275 27 25 chr10 118824408 118824587 -26764701 - MLT1J2-int LTR MaLR -1556 179 2 1731 216 27 84 chr10 118824589 118824970 -26764318 - MSTB2 LTR MaLR 0 457 108 2127 206 22 74 chr10 118824970 118825551 -26763737 + MLT2B3 LTR ERVL 1 551 -3 1731 216 27 84 chr10 118825551 118825654 -26763634 - MSTB2 LTR MaLR -349 108 1 663 167 48 24 chr10 118825656 118825782 -26763506 + FLAM_C SINE Alu 1 129 -14 196 310 186 0 chr10 118826128 118826241 -26763047 - MIR SINE MIR -63 199 66 268 360 48 58 chr10 118827787 118827976 -26761312 - L3 LINE CR1 -73 1504 1318 3491 203 92 31 chr10 118828151 118828948 -26760340 + MER21B LTR ERV1 1 845 -18 287 260 15 117 chr10 118829226 118829330 -26759958 - MLT1J2 LTR MaLR -14 436 360 1482 168 46 21 chr10 118829330 118829615 -26759673 + AluSx SINE Alu 1 292 -20 287 260 15 117 chr10 118829615 118829706 -26759582 - MLT1J2 LTR MaLR -90 360 261 2881 166 49 5 chr10 118829788 118830356 -26758932 - L1MA4 LINE L1 -22 6278 5686 379 278 120 42 chr10 118830376 118830567 -26758721 - MLT1J2 LTR MaLR -243 207 2 2355 94 0 0 chr10 118832647 118832946 -26756342 + AluSq SINE Alu 1 299 -14 417 368 18 31 chr10 118833226 118833449 -26755839 - MIR SINE MIR 0 262 43 46 45 0 0 chr10 118834045 118834112 -26755176 + AT_rich Low_complexity Low_complexity 1 67 0 225 213 49 16 chr10 118834561 118834622 -26754666 + MER5B DNA MER1_type 24 86 -92 22 0 0 0 chr10 118835655 118835677 -26753611 + AT_rich Low_complexity Low_complexity 1 22 0 236 147 59 73 chr10 118836051 118836119 -26753169 - L1MC/D LINE L1 -573 5786 5720 386 239 22 0 chr10 118836124 118836216 -26753072 - L2 LINE L2 -607 2707 2614 425 327 71 38 chr10 118837310 118837988 -26751300 - L1M4 LINE L1 -2156 3990 3291 255 274 40 61 chr10 118838019 118838396 -26750892 - L1MCc LINE L1 -4932 1491 1320 2273 159 56 14 chr10 118839208 118839622 -26749666 + MSTB1 LTR MaLR 2 432 0 482 344 140 26 chr10 118839715 118839934 -26749354 + L2 LINE L2 2211 2404 -910 18749 50 7 10 chr10 118839934 118843110 -26746178 + L1PA5 LINE L1 2963 6149 -5 482 344 140 26 chr10 118843110 118843382 -26745906 + L2 LINE L2 2404 2758 -556 882 257 125 25 chr10 118843527 118844095 -26745193 - L1MC5 LINE L1 -84 7877 7253 271 386 23 15 chr10 118844169 118844301 -26744987 + L2 LINE L2 3140 3272 0 603 317 48 5 chr10 118845940 118846148 -26743140 + LTR16B LTR ERVL 9 225 -239 4190 122 12 7 chr10 118848827 118849433 -26739855 - LTR9 LTR ERV1 0 612 4 2992 157 14 6 chr10 118849435 118849927 -26739361 - HUERS-P3 LTR ERV1 0 8919 8424 * 20834 133 18 48 chr10 118849904 118853431 -26735857 - HUERS-P3 LTR ERV1 -5484 3435 15 4176 123 8 13 chr10 118853446 118854055 -26735233 - LTR9 LTR ERV1 0 612 7 281 286 25 25 chr10 118855911 118856030 -26733258 - L1MC/D LINE L1 -1927 5881 5763 3363 187 11 3 chr10 118856259 118856900 -26732388 - L1P4 LINE L1 -1983 4163 3518 * 6102 152 46 2 chr10 118856896 118858351 -26730937 + L1P4 LINE L1 4167 5687 -487 744 132 0 0 chr10 118858352 118858458 -26730830 + AluSq/x SINE Alu 1 106 -206 345 42 0 84 chr10 118858558 118858629 -26730659 + (GGGA)n Simple_repeat Simple_repeat 4 68 0 376 229 140 67 chr10 118858805 118858984 -26730304 + HERVK3 LTR ERVK 81 272 -6971 446 261 0 0 chr10 118859045 118859137 -26730151 + HERVK3 LTR ERVK 589 680 -6563 * 4590 180 31 23 chr10 118859125 118860539 -26728749 + HERVK3 LTR ERVK 1321 5579 -366 1346 148 18 9 chr10 118860533 118860569 -26728719 + PRIMA41-int LTR ERV1 7538 7756 0 * 1423 77 22 0 chr10 118860569 118860750 -26728538 + HERVK3 LTR ERVK 5575 5759 -186 348 199 0 18 chr10 118860750 118860825 -26728463 + MER41C LTR ERV1 1 61 -493 441 56 0 0 chr10 118860825 118860879 -26728409 + HERVK14 LTR ERVK 5835 5888 -57 2156 110 20 51 chr10 118860884 118861238 -26728050 + LTR3b LTR ERVK 158 500 0 510 250 0 0 chr10 118861238 118861346 -26727942 + L1PA16 LINE L1 6039 6146 -20 1662 260 118 21 chr10 118861423 118862277 -26727011 + L1MDa LINE L1 1358 2294 -4246 313 254 39 39 chr10 118862490 118862620 -26726668 + L1ME1 LINE L1 6024 6153 -13 12804 220 58 22 chr10 118862838 118863362 -26725926 - L1PA15 LINE L1 0 7603 7100 2406 77 0 0 chr10 118863362 118863673 -26725615 - AluY SINE Alu 0 311 1 12804 220 58 22 chr10 118863673 118865545 -26723743 - L1PA15 LINE L1 -503 7100 5298 1870 164 19 24 chr10 118865545 118865922 -26723366 + THE1C LTR MaLR 1 375 0 12804 220 58 22 chr10 118865922 118867232 -26722056 - L1PA15 LINE L1 -2305 5298 4037 2250 175 41 2 chr10 118867232 118867644 -26721644 - MSTA LTR MaLR 0 428 1 12804 220 58 22 chr10 118867644 118868115 -26721173 - L1PA15 LINE L1 -3566 4037 3585 2298 114 0 16 chr10 118868115 118868430 -26720858 - AluSx SINE Alu 0 312 3 12804 220 58 22 chr10 118868430 118868876 -26720412 - L1PA15 LINE L1 -4018 3585 2801 592 298 57 33 chr10 118869249 118869615 -26719673 - L1PA15 LINE L1 -7200 381 7 628 265 165 21 chr10 118870721 118871131 -26718157 - L1ME2 LINE L1 -300 5864 5393 324 188 0 0 chr10 118871226 118871295 -26717993 + (CA)n Simple_repeat Simple_repeat 2 70 0 192 229 0 0 chr10 118871295 118871330 -26717958 + L2 LINE L2 3219 3253 -19 185 233 0 23 chr10 118871296 118871339 -26717949 + MIR SINE MIR 216 257 -5 * 5521 139 31 2 chr10 118871564 118872523 -26716765 - L1PA16 LINE L1 -9 6157 5177 5060 222 13 10 chr10 118872530 118873772 -26715516 + L1PA16 LINE L1 3899 5144 -1002 452 311 63 11 chr10 118874595 118874785 -26714503 + MIR SINE MIR 53 252 -10 229 288 0 17 chr10 118874890 118874949 -26714339 - MIR SINE MIR -114 148 91 432 0 0 0 chr10 118875150 118875198 -26714090 + (CCTA)n Simple_repeat Simple_repeat 4 51 0 1158 193 220 3 chr10 118875352 118875699 -26713589 + Tigger2 DNA MER2_type 23 2713 -5 4344 235 57 43 chr10 118875904 118876583 -26712705 - L1MB8 LINE L1 -169 6507 5839 2331 84 7 3 chr10 118876583 118876893 -26712395 - AluY SINE Alu 0 311 1 4344 235 57 43 chr10 118876893 118878800 -26710488 - L1MB8 LINE L1 -837 5839 3863 2026 121 11 3 chr10 118878805 118879087 -26710201 - AluSg SINE Alu -26 284 1 4170 103 7 2 chr10 118879294 118879904 -26709384 - L1PA12 LINE L1 0 6168 5556 809 106 16 0 chr10 118879909 118880032 -26709256 + L1PA12 LINE L1 5410 5534 -627 1107 253 66 14 chr10 118880038 118880520 -26708768 - L1MB8 LINE L1 -3010 3634 3128 862 221 102 32 chr10 118880525 118880796 -26708492 - MLT1D LTR MaLR -3 502 228 1797 138 154 39 chr10 118880844 118881228 -26708060 + MSTA LTR MaLR 1 428 0 8490 194 24 4 chr10 118881228 118882829 -26706459 + MSTA-int LTR MaLR 1 1634 -17 2071 142 134 8 chr10 118882846 118883226 -26706062 + MSTA LTR MaLR 1 428 0 381 286 0 80 chr10 118883226 118883401 -26705887 - MLT1D LTR MaLR -342 163 3 984 265 95 23 chr10 118883410 118884255 -26705033 - L1MB8 LINE L1 -3526 3118 2205 1692 246 44 86 chr10 118884261 118886239 -26703049 - L1MB8 LINE L1 -4540 2106 14 1002 165 99 14 chr10 118887372 118887584 -26701704 + MER46A DNA MER2_type 1 230 -6 2801 242 50 19 chr10 118887714 118888462 -26700826 + HERVL74 LTR ERVL 1181 1951 -3734 1045 207 7 3 chr10 118889620 118889823 -26699465 + MSTA LTR MaLR 1 201 -225 202 245 19 0 chr10 118892156 118892209 -26697079 - MIR SINE MIR -70 192 139 191 313 125 0 chr10 118893762 118893842 -26695446 - MIR3 SINE MIR -4 204 115 242 349 58 29 chr10 118894290 118894452 -26694836 - MIR3 SINE MIR -65 143 15 290 279 126 38 chr10 118894639 118894822 -26694466 - MIR SINE MIR -56 206 8 2472 71 0 0 chr10 118897897 118898207 -26691081 + AluY SINE Alu 1 310 -1 563 294 6 18 chr10 118898667 118898830 -26690458 + MIR SINE MIR 73 233 -29 227 328 15 0 chr10 118898882 118898949 -26690339 - L2 LINE L2 -1 3312 3245 189 365 0 32 chr10 118899837 118899900 -26689388 + L2 LINE L2 3191 3251 -21 268 293 86 57 chr10 118900259 118900303 -26688985 + MIR SINE MIR 30 71 -191 2367 144 6 0 chr10 118900303 118900664 -26688624 - THE1B LTR MaLR -1 363 1 268 293 86 57 chr10 118900664 118900759 -26688529 + MIR SINE MIR 71 173 -89 600 295 71 5 chr10 118902478 118902688 -26686600 - MIR SINE MIR -26 236 13 379 335 131 10 chr10 118903976 118904182 -26685106 - MIR SINE MIR -27 235 5 272 146 36 0 chr10 118904669 118904724 -26684564 + (TATATG)n Simple_repeat Simple_repeat 2 58 0 358 235 19 116 chr10 118904846 118904898 -26684390 - MIR SINE MIR -64 198 143 2169 189 54 40 chr10 118904898 118905401 -26683887 + MER67D LTR ERV1 1 510 -4 358 235 19 116 chr10 118905401 118905540 -26683748 - MIR SINE MIR -119 143 17 3007 167 80 36 chr10 118905613 118906273 -26683015 + LTR8 LTR ERV1 3 691 0 312 70 0 0 chr10 118906343 118906386 -26682902 + (TG)n Simple_repeat Simple_repeat 1 43 0 412 352 98 0 chr10 118907342 118907535 -26681753 + MIR SINE MIR 49 260 -2 388 179 13 0 chr10 118907832 118907910 -26681378 + MADE1 DNA Mariner 2 80 0 24 0 0 0 chr10 118907975 118907999 -26681289 + AT_rich Low_complexity Low_complexity 1 24 0 188 200 114 29 chr10 118908247 118908317 -26680971 + L2 LINE L2 2678 2753 -561 385 293 43 38 chr10 118909029 118909194 -26680094 + MIR SINE MIR 12 174 -62 227 371 180 0 chr10 118909282 118909371 -26679917 - MER91A DNA MER1_type -90 106 2 1399 175 3 62 chr10 118911531 118911822 -26677466 - AluJo SINE Alu -3 309 36 355 313 37 12 chr10 118912078 118912241 -26677047 + MIR SINE MIR 37 203 -59 328 166 43 22 chr10 118912484 118912576 -26676712 - L1MC3 LINE L1 -1 7994 7705 494 235 292 8 chr10 118912667 118912901 -26676387 + MLT1F1 LTR MaLR 176 460 -107 435 351 21 11 chr10 118912988 118913176 -26676112 + MIR SINE MIR 14 203 -59 425 171 68 0 chr10 118913240 118913328 -26675960 + MLT1F LTR MaLR 449 542 0 216 287 92 0 chr10 118913364 118913451 -26675837 - L2 LINE L2 -22 3291 3197 265 319 44 22 chr10 118914858 118914999 -26674289 - MIR SINE MIR -63 145 19 2030 115 55 33 chr10 118915867 118916233 -26673055 + THE1C LTR MaLR 1 374 -1 276 280 64 76 chr10 118916254 118916411 -26672877 - MER5A DNA MER1_type -28 161 7 246 308 0 0 chr10 118917128 118917193 -26672095 + MIR SINE MIR 18 82 -180 244 277 125 33 chr10 118917626 118917779 -26671509 - MIR SINE MIR -55 153 23 23 54 0 0 chr10 118918744 118918781 -26670507 + AT_rich Low_complexity Low_complexity 1 37 0 380 313 96 5 chr10 118918829 118919037 -26670251 + L1MEc LINE L1 48 274 -6122 365 275 74 32 chr10 118919480 118919764 -26669524 + L1MEc LINE L1 684 979 -5226 775 295 101 19 chr10 118919825 118920576 -26668712 - L1MEc LINE L1 -3478 2602 1838 3878 181 53 48 chr10 118920829 118921684 -26667604 - MER21B LTR ERV1 -4 859 1 331 262 174 34 chr10 118921826 118921975 -26667313 - L1MEc LINE L1 -4695 1385 1216 1305 283 98 44 chr10 118922053 118922953 -26666335 - L1MEc LINE L1 -4981 1089 142 4812 102 7 42 chr10 118922986 118923742 -26665546 - L1PA10 LINE L1 -1 6167 5439 1796 152 44 0 chr10 118924385 118924566 -26664722 - AluSg SINE Alu 0 310 110 237 33 0 0 chr10 118924566 118924596 -26664692 + (TA)n Simple_repeat Simple_repeat 1 30 0 1796 152 44 0 chr10 118924596 118924711 -26664577 - AluSg SINE Alu -200 110 1 2240 187 31 7 chr10 118925522 118925944 -26663344 + MSTB1 LTR MaLR 1 432 0 588 213 42 71 chr10 118925967 118926242 -26663046 - MLT1A1 LTR MaLR 0 396 1 2186 199 17 55 chr10 118928151 118928665 -26660623 - MLT2B2 LTR ERVL -18 471 1 1966 188 11 0 chr10 118928694 118929055 -26660233 + MER57A LTR ERV1 37 401 -2 1259 200 122 95 chr10 118929786 118930368 -26658920 + LTR49 LTR ERV1 4 541 -1 252 338 71 39 chr10 118930920 118931074 -26658214 + L2 LINE L2 2608 2766 -548 617 61 0 0 chr10 118931375 118931457 -26657831 - L1MA7 LINE L1 -26 6265 6184 311 297 21 28 chr10 118931453 118931598 -26657690 - L1M4 LINE L1 -1131 5015 4872 * 354 253 12 59 chr10 118931605 118931775 -26657513 - L1M4 LINE L1 -1408 4738 4577 1928 179 38 98 chr10 118932042 118932415 -26656873 - MSTB2 LTR MaLR -7 450 111 2247 95 0 7 chr10 118932415 118932709 -26656579 - AluY SINE Alu -17 294 3 1928 179 38 98 chr10 118932709 118932814 -26656474 - MSTB2 LTR MaLR -346 111 1 2401 204 149 72 chr10 118932819 118933639 -26655649 - MSTB2-int LTR MaLR -5 1646 764 2415 87 0 0 chr10 118933671 118933982 -26655306 + AluY SINE Alu 1 311 0 2586 226 34 10 chr10 118933983 118934661 -26654627 + L1MB8 LINE L1 5316 6009 -169 1085 206 207 5 chr10 118934866 118935214 -26654074 - Tigger2 DNA MER2_type -5 2713 22 198 71 0 0 chr10 118935214 118935242 -26654046 + (TG)n Simple_repeat Simple_repeat 2 29 0 210 191 0 0 chr10 118935248 118935290 -26653998 + (CATA)n Simple_repeat Simple_repeat 2 43 0 1531 144 116 0 chr10 118935900 118936046 -26653242 - L1PA16 LINE L1 -2 6164 6019 289 224 156 73 chr10 118936046 118936225 -26653063 - L1MA4 LINE L1 -293 6007 5814 305 157 0 0 chr10 118937812 118937873 -26651415 + L1MA6 LINE L1 6224 6287 -13 1496 164 63 114 chr10 118937874 118938331 -26650957 - MER61C LTR ERV1 0 434 1 226 264 125 14 chr10 118938453 118938525 -26650763 + L2 LINE L2 3173 3252 -20 549 260 139 14 chr10 118939449 118939657 -26649631 - MIR SINE MIR 0 262 29 432 0 0 0 chr10 118941663 118941711 -26647577 + (TAGG)n Simple_repeat Simple_repeat 4 51 0 220 299 0 15 chr10 118942407 118942474 -26646814 + MIR SINE MIR 83 148 -60 317 341 67 17 chr10 118942781 118942960 -26646328 + MER5A DNA MER1_type 2 189 0 257 211 28 28 chr10 118943732 118943841 -26645447 + CT-rich Low_complexity Low_complexity 3 111 0 4936 32 0 0 chr10 118943953 118944537 -26644751 - L1PA3 LINE L1 -3 6152 5569 * 7425 35 6 0 chr10 118944535 118945964 -26643324 + L1PA3 LINE L1 4716 6150 -5 2693 197 107 97 chr10 118945970 118946354 -26642934 + L1MC3 LINE L1 6732 7111 -674 237 257 81 27 chr10 118946354 118946428 -26642860 + MLT1F1 LTR MaLR 48 125 -442 2693 197 107 97 chr10 118946428 118946981 -26642307 + L1MC3 LINE L1 7111 7752 -33 1082 203 30 20 chr10 118946973 118947244 -26642044 + L1ME LINE L1 5276 5544 -617 * 467 218 128 0 chr10 118947260 118947416 -26641872 + L1MD3 LINE L1 7810 7985 -10 267 192 0 27 chr10 118947616 118947689 -26641599 - L1 LINE L1 -1496 4650 4580 2147 115 0 0 chr10 118947689 118947984 -26641304 + AluSg SINE Alu 10 304 -6 36 62 0 0 chr10 118948318 118948382 -26640906 + AT_rich Low_complexity Low_complexity 1 64 0 181 226 57 0 chr10 118948841 118948894 -26640394 - MIR SINE MIR -67 141 86 235 271 154 55 chr10 118949455 118949634 -26639654 - MIR SINE MIR -40 222 23 237 373 24 16 chr10 118949838 118949964 -26639324 - L3 LINE CR1 -13 1564 1438 22 0 0 0 chr10 118950626 118950648 -26638640 + AT_rich Low_complexity Low_complexity 1 22 0 303 256 57 104 chr10 118951399 118951652 -26637636 - L1ME4a LINE L1 -49 6072 5833 2335 105 0 0 chr10 118951652 118951956 -26637332 - AluSx SINE Alu -8 304 1 303 256 57 104 chr10 118951956 118951999 -26637289 - L1ME4a LINE L1 -288 5833 5790 410 231 32 109 chr10 118952367 118952523 -26636765 + MIR SINE MIR 49 192 -70 189 292 0 21 chr10 118953020 118953068 -26636220 - MIR SINE MIR -139 69 23 349 294 40 52 chr10 118953253 118953505 -26635783 + L1ME4a LINE L1 5792 6040 -81 29 32 0 48 chr10 118953746 118953808 -26635480 + AT_rich Low_complexity Low_complexity 1 59 0 336 264 0 38 chr10 118955366 118955472 -26633816 + CT-rich Low_complexity Low_complexity 3 104 0 27 73 0 0 chr10 118955703 118955758 -26633530 + AT_rich Low_complexity Low_complexity 1 55 0 1385 249 105 27 chr10 118956054 118956744 -26632544 - L1ME2 LINE L1 0 6164 5396 324 188 0 0 chr10 118956842 118956911 -26632377 + (CA)n Simple_repeat Simple_repeat 2 70 0 184 229 0 0 chr10 118956911 118956946 -26632342 + L2 LINE L2 3219 3253 -19 220 299 0 15 chr10 118957710 118957777 -26631511 - MIR SINE MIR -60 148 83 22 70 0 0 chr10 118958794 118958837 -26630451 + AT_rich Low_complexity Low_complexity 1 43 0 1395 177 122 25 chr10 118959025 118959387 -26629901 - MLT2C1 LTR ERVL 0 397 1 344 206 53 61 chr10 118959644 118959775 -26629513 - MLT1I LTR MaLR -205 204 75 650 313 49 0 chr10 118960215 118960439 -26628849 - MIR SINE MIR -1 261 27 301 349 81 41 chr10 118960586 118961021 -26628267 + L2 LINE L2 2259 2710 -604 1604 197 77 3 chr10 118961217 118961557 -26627731 + MLT1A1 LTR MaLR 1 365 0 360 342 45 15 chr10 118962692 118962891 -26626397 + MIR SINE MIR 5 209 -53 217 152 0 0 chr10 118962999 118963032 -26626256 + MIR SINE MIR 219 251 -11 599 76 0 0 chr10 118963035 118963114 -26626174 + L1P4 LINE L1 5600 5678 -496 5114 112 20 3 chr10 118963587 118964440 -26624848 + L1PA12 LINE L1 5157 6027 -141 3726 131 0 2 chr10 118964598 118965178 -26624110 + L1PA13 LINE L1 5581 6159 -4 322 240 40 40 chr10 118965234 118965334 -26623954 + L2 LINE L2 3214 3313 0 204 304 14 0 chr10 118965340 118965409 -26623879 + MIR SINE MIR 131 200 -62 470 300 113 13 chr10 118966721 118967101 -26622187 - L1ME4a LINE L1 -12 6109 5692 429 274 34 16 chr10 118967173 118967398 -26621890 + MLT1G1 LTR MaLR 20 254 -336 215 225 42 14 chr10 118967425 118967496 -26621792 + GA-rich Low_complexity Low_complexity 4 76 0 241 237 17 17 chr10 118967534 118967593 -26621695 + MLT1G1 LTR MaLR 339 397 -193 242 253 53 13 chr10 118967731 118967806 -26621482 + MLT1A1-int LTR MaLR 17 94 -1277 1450 219 14 4 chr10 118968180 118968458 -26620830 + AluJo SINE Alu 5 285 -27 254 259 35 70 chr10 118969301 118969444 -26619844 + MLT1A1-int LTR MaLR 1220 1357 -14 419 319 145 4 chr10 118969477 118969709 -26619579 + MLT1H1 LTR MaLR 3 265 -290 293 217 113 61 chr10 118969857 118969972 -26619316 + MLT1G1 LTR MaLR 429 576 0 180 246 18 35 chr10 118970224 118970281 -26619007 - L2 LINE L2 0 3272 3217 572 284 42 23 chr10 118970480 118970695 -26618593 - MIR SINE MIR -10 252 34 188 296 0 0 chr10 118970724 118970778 -26618510 + MIR SINE MIR 104 157 -105 2344 127 14 0 chr10 118971154 118971517 -26617771 + L1PA13 LINE L1 5791 6158 -5 26 0 0 0 chr10 118973534 118973560 -26615728 + AT_rich Low_complexity Low_complexity 1 26 0 919 234 100 97 chr10 118973662 118974210 -26615078 - LTR50 LTR ERVL -35 760 211 401 344 87 14 chr10 118974403 118974691 -26614597 + L2 LINE L2 2999 3307 -6 260 353 21 21 chr10 118975348 118975589 -26613699 - L1ME3A LINE L1 -239 5931 5691 1097 206 38 2 chr10 118975810 118976091 -26613197 + MER2 DNA MER2_type 4 344 -1 240 122 0 0 chr10 118976099 118976140 -26613148 + (TA)n Simple_repeat Simple_repeat 1 41 0 344 332 94 13 chr10 118976170 118976405 -26612883 - L1ME3A LINE L1 -559 5605 5352 208 53 53 0 chr10 118977361 118977399 -26611889 + (TA)n Simple_repeat Simple_repeat 1 40 0 404 156 29 23 chr10 118977421 118977594 -26611694 + (TA)n Simple_repeat Simple_repeat 2 175 0 44 46 0 0 chr10 118977594 118977659 -26611629 + AT_rich Low_complexity Low_complexity 1 65 0 268 323 0 15 chr10 118977967 118978100 -26611188 + (CATA)n Simple_repeat Simple_repeat 2 132 0 21 36 0 0 chr10 118978578 118978606 -26610682 + AT_rich Low_complexity Low_complexity 1 28 0 246 200 10 90 chr10 118978675 118978775 -26610513 - MIR SINE MIR -51 211 120 33 25 0 0 chr10 118979375 118979415 -26609873 + AT_rich Low_complexity Low_complexity 1 40 0 321 295 0 13 chr10 118979422 118979500 -26609788 - MER5B DNA MER1_type -98 80 4 2407 105 24 16 chr10 118980016 118980388 -26608900 + THE1C LTR MaLR 1 375 0 290 337 47 23 chr10 118981009 118981181 -26608107 - MIR SINE MIR -70 192 17 2144 147 0 0 chr10 118981411 118981723 -26607565 + AluSx SINE Alu 1 312 0 5093 86 17 12 chr10 118982367 118983092 -26606196 + L1PA11 LINE L1 5439 6166 -8 357 24 0 0 chr10 118983212 118983254 -26606034 + (TG)n Simple_repeat Simple_repeat 1 42 0 836 128 0 0 chr10 118983516 118983633 -26605655 + AluSg SINE Alu 1 117 -193 762 11 0 0 chr10 118983633 118983720 -26605568 + (TA)n Simple_repeat Simple_repeat 1 87 0 21 36 0 0 chr10 118984132 118984160 -26605128 + AT_rich Low_complexity Low_complexity 1 28 0 1332 196 7 44 chr10 118984174 118984445 -26604843 + AluJo SINE Alu 11 271 -41 567 46 35 0 chr10 118984451 118984538 -26604750 + (TAGA)n Simple_repeat Simple_repeat 1 90 0 953 223 52 9 chr10 118984593 118984822 -26604466 + MLT1D LTR MaLR 3 241 -264 26 0 0 0 chr10 118985509 118985535 -26603753 + AT_rich Low_complexity Low_complexity 1 26 0 7187 142 4 6 chr10 118986498 118987616 -26601672 - HERVL LTR ERVL -3563 2091 977 321 322 40 40 chr10 118987961 118988135 -26601153 + MIR SINE MIR 40 213 -49 432 99 0 0 chr10 118988250 118988321 -26600967 + (TC)n Simple_repeat Simple_repeat 1 71 0 434 193 80 0 chr10 118988359 118988447 -26600841 - MLT1I LTR MaLR -12 397 303 1233 235 27 9 chr10 118989087 118989415 -26599873 + L1MC4a LINE L1 6217 6550 -1258 2830 210 52 8 chr10 118989438 118990087 -26599201 + L1MC3 LINE L1 7107 7784 -1 1887 213 21 19 chr10 118990074 118990355 -26598933 + L1MD3 LINE L1 7553 7837 -158 * 1999 186 44 16 chr10 118990355 118990786 -26598502 + MER65A LTR ERV1 3 445 0 1887 213 21 19 chr10 118990786 118990936 -26598352 + L1MD3 LINE L1 7837 7985 -10 326 305 0 15 chr10 118991376 118991507 -26597781 + GA-rich Low_complexity Low_complexity 2 130 0 237 280 13 0 chr10 118991513 118991588 -26597700 + G-rich Low_complexity Low_complexity 2 77 0 234 0 0 0 chr10 118991595 118991621 -26597667 + (CA)n Simple_repeat Simple_repeat 1 26 0 220 380 39 39 chr10 118992012 118992141 -26597147 + MIR3 SINE MIR 55 183 -25 1995 138 3 0 chr10 118992149 118992445 -26596843 - AluSx SINE Alu -15 297 1 545 332 14 5 chr10 118992525 118992739 -26596549 - MLT2E LTR ERVL 0 628 413 244 284 21 21 chr10 118993959 118994054 -26595234 + GA-rich Low_complexity Low_complexity 4 98 0 1659 177 133 21 chr10 118994131 118994516 -26594772 + MSTA LTR MaLR 1 428 0 210 154 0 0 chr10 118994896 118994935 -26594353 + T-rich Low_complexity Low_complexity 1 39 0 386 317 49 49 chr10 118995011 118995216 -26594072 + L1ME LINE L1 5564 5768 -353 2324 96 0 0 chr10 118995558 118995850 -26593438 + AluSc SINE Alu 10 301 -8 1499 190 11 4 chr10 118997373 118997652 -26591636 + HERVL-B3 LTR ERVL 3459 3739 -1915 5376 115 9 4 chr10 118997655 118999004 -26590284 + HERVL-B3 LTR ERVL 4254 5652 -2 2114 214 23 71 chr10 118999006 118999581 -26589707 + MLT2B3 LTR ERVL 1 547 -7 31 0 0 0 chr10 119000793 119000824 -26588464 + AT_rich Low_complexity Low_complexity 1 31 0 239 176 20 0 chr10 119000869 119000920 -26588368 + MER103 DNA DNA 59 110 -56 239 186 68 0 chr10 119001258 119001317 -26587971 + MLT1L LTR MaLR 205 267 -348 261 293 63 58 chr10 119001421 119001612 -26587676 + MLT1L LTR MaLR 422 613 -2 21 0 0 0 chr10 119001617 119001638 -26587650 + AT_rich Low_complexity Low_complexity 1 21 0 480 228 67 47 chr10 119002482 119002675 -26586613 - MER97c DNA MER1_type? 0 1090 894 271 386 23 15 chr10 119005235 119005367 -26583921 - L2 LINE L2 0 3272 3140 585 256 72 38 chr10 119005441 119005734 -26583554 + L1MC5 LINE L1 7253 7555 -406 396 284 76 5 chr10 119005799 119006010 -26583278 + L1MC5 LINE L1 7652 7877 -84 294 348 169 11 chr10 119006120 119006304 -26582984 - L2 LINE L2 -512 2802 2590 7071 57 9 0 chr10 119006427 119007505 -26581783 - L1PA5 LINE L1 -5 6149 5078 1988 135 13 26 chr10 119007505 119007817 -26581471 + MER1A DNA MER1_type 87 394 -135 277 226 0 0 chr10 119008797 119008850 -26580438 + AluJ/monomer SINE Alu 1 53 -249 27372 99 10 15 chr10 119008999 119013953 -26575335 - L1PA7 LINE L1 -50 6104 1158 1596 228 16 9 chr10 119013955 119014384 -26574904 - L1 LINE L1 -1635 4511 4080 491 261 196 39 chr10 119014344 119014807 -26574481 + L1M4 LINE L1 2988 3523 -2623 * 1217 113 9 14 chr10 119015035 119015248 -26574040 + L1P4 LINE L1 5258 5469 -697 917 239 7 73 chr10 119015246 119015535 -26573753 - L1M4b LINE L1 -6589 270 1 * 192 344 26 97 chr10 119015537 119015848 -26573440 + L2 LINE L2 2596 2884 -430 291 251 337 11 chr10 119015920 119016107 -26573181 + MIR SINE MIR 15 262 0 233 333 114 9 chr10 119016304 119016409 -26572879 + L2 LINE L2 3137 3252 -20 2147 128 0 3 chr10 119019392 119019690 -26569598 + AluSx SINE Alu 1 297 -15 298 306 18 52 chr10 119019733 119019901 -26569387 - MIR SINE MIR -76 186 20 838 194 121 34 chr10 119019908 119020114 -26569174 + MER58A DNA MER1_type 1 224 0 451 254 99 14 chr10 119020790 119020932 -26568356 + L2 LINE L2 3160 3313 0 342 284 0 37 chr10 119021991 119022100 -26567188 + MER5B DNA MER1_type 73 177 -1 216 347 16 57 chr10 119023271 119023395 -26565893 - MIR3 SINE MIR -84 124 6 186 43 0 0 chr10 119023829 119023852 -26565436 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 777 283 103 25 chr10 119026297 119026813 -26562475 + MLT1G1 LTR MaLR 1 590 -5 29 0 0 0 chr10 119027980 119028009 -26561279 + AT_rich Low_complexity Low_complexity 1 29 0 269 192 28 11 chr10 119028031 119028208 -26561080 + (TA)n Simple_repeat Simple_repeat 1 180 0 282 29 0 0 chr10 119028208 119028243 -26561045 + (TC)n Simple_repeat Simple_repeat 2 36 0 256 328 15 30 chr10 119028255 119028389 -26560899 + L2 LINE L2 2553 2684 -630 1513 142 48 9 chr10 119028553 119028903 -26560385 + LTR54B LTR ERV1 3 496 -2 228 311 40 0 chr10 119029995 119030069 -26559219 + MIR SINE MIR 2 78 -184 604 371 34 8 chr10 119030099 119030424 -26558864 + L2 LINE L2 2674 3004 -268 185 343 111 6 chr10 119030577 119030758 -26558530 + L2 LINE L2 3112 3311 -2 406 321 31 58 chr10 119030793 119031017 -26558271 - MIR SINE MIR -9 253 36 1554 247 48 2 chr10 119032015 119032428 -26556860 + L1PBa LINE L1 6 437 -6426 7047 114 31 3 chr10 119032435 119033579 -26555709 + L1PBa LINE L1 1488 2663 -4200 927 242 72 56 chr10 119034077 119034436 -26554852 + MLT1A1 LTR MaLR 1 365 0 1551 126 0 0 chr10 119035025 119035264 -26554024 - L1PA13 LINE L1 0 6163 5925 205 344 22 11 chr10 119035794 119035884 -26553404 + MIR SINE MIR 50 140 -68 3608 153 75 7 chr10 119036991 119037684 -26551604 + Tigger3(Golem) DNA MER2_type 2287 3026 -3 247 320 10 0 chr10 119037799 119037899 -26551389 + L1M2 LINE L1 5339 5439 -858 269 279 12 23 chr10 119037932 119038018 -26551270 + GA-rich Low_complexity Low_complexity 6 90 0 346 219 38 8 chr10 119038024 119038120 -26551168 + L1ME3A LINE L1 5482 5576 -588 284 311 17 50 chr10 119038321 119038440 -26550848 + MLT1H LTR MaLR 238 352 -197 626 222 47 97 chr10 119038601 119038880 -26550408 + L1ME3A LINE L1 5573 5837 -333 299 281 6 81 chr10 119038922 119039082 -26550206 + L1ME3A LINE L1 5951 6098 -72 264 297 109 55 chr10 119039628 119039793 -26549495 + MIR SINE MIR 20 193 -69 677 149 13 191 chr10 119039943 119040178 -26549110 - 7SK RNA RNA 0 193 1 317 65 19 74 chr10 119040278 119040386 -26548902 + (TA)n Simple_repeat Simple_repeat 2 103 0 272 188 16 0 chr10 119040433 119040497 -26548791 + (TA)n Simple_repeat Simple_repeat 2 66 0 223 342 53 9 chr10 119041170 119041284 -26548004 + L2 LINE L2 3187 3305 -8 462 320 72 25 chr10 119041606 119042006 -26547282 - L1ME3A LINE L1 -208 5962 5544 198 374 87 0 chr10 119042069 119042184 -26547104 - MIR3 SINE MIR -42 166 42 354 200 62 0 chr10 119042718 119042783 -26546505 + L2 LINE L2 3204 3272 0 1245 226 42 14 chr10 119043189 119043354 -26545934 - AluJo SINE Alu -16 296 118 425 19 19 0 chr10 119043354 119043408 -26545880 + (TTA)n Simple_repeat Simple_repeat 2 56 0 1245 226 42 14 chr10 119043408 119043530 -26545758 - AluJo SINE Alu -194 118 1 358 259 35 77 chr10 119043745 119043915 -26545373 + L1MEc LINE L1 1445 1607 -4789 243 341 8 53 chr10 119043956 119044088 -26545200 - L2 LINE L2 -264 3049 2924 2256 123 31 17 chr10 119044133 119044492 -26544796 + THE1B LTR MaLR 1 364 0 268 356 59 0 chr10 119046184 119046302 -26542986 - MIR SINE MIR -26 236 112 8751 209 43 39 chr10 119046380 119048788 -26540500 + Cheshire DNA MER1_type 2 2419 -1 206 319 90 43 chr10 119049296 119049484 -26539804 - L2 LINE L2 -352 2962 2766 640 150 8 8 chr10 119049484 119049611 -26539677 + L1MB3 LINE L1 5773 5899 -284 2040 134 3 0 chr10 119050372 119050655 -26538633 + AluSx SINE Alu 1 284 -28 29 0 0 0 chr10 119050659 119050688 -26538600 + AT_rich Low_complexity Low_complexity 1 29 0 207 281 0 18 chr10 119050959 119051016 -26538272 - L2 LINE L2 -4 3309 3254 276 77 0 0 chr10 119051429 119051468 -26537820 + (TG)n Simple_repeat Simple_repeat 2 40 0 200 205 128 26 chr10 119052387 119052465 -26536823 + MIR SINE MIR 177 262 0 205 314 20 0 chr10 119052631 119052682 -26536606 + MER5A DNA MER1_type 137 188 -1 575 297 73 39 chr10 119052719 119053005 -26536283 - L3 LINE CR1 -75 1502 1207 2008 134 0 0 chr10 119053108 119053416 -26535872 - AluSx SINE Alu 0 314 7 251 305 133 13 chr10 119053440 119053591 -26535697 + Charlie8 DNA MER1_type 85 253 -2164 509 354 60 25 chr10 119054026 119054393 -26534895 + MLT1K LTR MaLR 117 496 -92 200 337 169 0 chr10 119055408 119055491 -26533797 + MIR SINE MIR 48 144 -118 29 47 0 0 chr10 119056455 119056498 -26532790 + AT_rich Low_complexity Low_complexity 1 43 0 752 199 56 161 chr10 119056498 119056765 -26532523 - MER8 DNA MER2_type 0 239 1 332 47 0 0 chr10 119056980 119057023 -26532265 + U5 snRNA snRNA 2 44 -72 2180 86 0 0 chr10 119057181 119057475 -26531813 + AluY SINE Alu 15 308 0 214 300 163 12 chr10 119058495 119058655 -26530633 - MIR SINE MIR -78 184 1 306 331 25 26 chr10 119060399 119060536 -26528752 - MIR SINE MIR -66 142 22 2054 163 32 70 chr10 119061472 119061723 -26527565 - MSTA LTR MaLR 0 428 200 3186 26 0 8 chr10 119061723 119062105 -26527183 + L1PA3 LINE L1 5776 6154 -1 2054 163 32 70 chr10 119062105 119062295 -26526993 - MSTA LTR MaLR -228 200 4 285 75 0 0 chr10 119062443 119062483 -26526805 + (TG)n Simple_repeat Simple_repeat 2 41 0 221 257 243 0 chr10 119063090 119063164 -26526124 - L2 LINE L2 -18 3254 3163 396 293 65 0 chr10 119063323 119063446 -26525842 - MIR SINE MIR -97 165 35 205 200 0 0 chr10 119065068 119065103 -26524185 + L2 LINE L2 3222 3256 -16 297 360 56 11 chr10 119065279 119065457 -26523831 - MER117 DNA MER1_type -6 191 6 9301 136 50 7 chr10 119066857 119068371 -26520917 + THE1B-int LTR MaLR 1 1580 0 2436 129 3 0 chr10 119068371 119068734 -26520554 + THE1B LTR MaLR 1 364 0 1747 152 0 0 chr10 119069057 119069321 -26519967 - AluSx SINE Alu -8 304 41 240 380 9 9 chr10 119069432 119069545 -26519743 - MIR SINE MIR -122 140 28 10201 86 6 21 chr10 119070419 119072589 -26516699 + L1PA7 LINE L1 3916 6064 -90 2287 147 8 11 chr10 119073061 119073435 -26515853 + Tigger2 DNA MER2_type 2346 2718 0 326 300 167 0 chr10 119075443 119075593 -26513695 - MER5A DNA MER1_type -11 178 4 205 268 190 21 chr10 119076078 119076220 -26513068 + MIR SINE MIR 97 262 0 1209 83 10 20 chr10 119076481 119076685 -26512603 + L1P4 LINE L1 5268 5469 -697 917 239 7 73 chr10 119076683 119076972 -26512316 - L1M4b LINE L1 -6589 270 1 * 192 344 26 97 chr10 119076974 119077285 -26512003 + L2 LINE L2 2596 2884 -430 291 251 337 11 chr10 119077357 119077544 -26511744 + MIR SINE MIR 15 262 0 233 333 114 9 chr10 119077741 119077846 -26511442 + L2 LINE L2 3137 3252 -20 1901 130 58 3 chr10 119080829 119081121 -26508167 + AluSx SINE Alu 1 308 -4 2853 223 18 7 chr10 119081125 119081140 -26508148 + L1P LINE L1 4501 4514 -1632 1823 95 8 4 chr10 119081140 119081413 -26507875 + AluY SINE Alu 37 310 0 2853 223 18 7 chr10 119081413 119082124 -26507164 + L1P LINE L1 4514 5236 -910 11477 41 4 0 chr10 119082306 119083722 -26505566 - L1P LINE L1 -794 5352 3931 34947 52 2 1 chr10 119083722 119088969 -26500319 + L1PA5 LINE L1 910 6166 0 1304 73 30 0 chr10 119088987 119089151 -26500137 + AluY SINE Alu 127 295 -16 302 200 32 95 chr10 119089353 119089448 -26499840 - L1MC4 LINE L1 -1339 6703 6615 319 288 0 0 chr10 119089652 119089725 -26499563 - MER58 DNA MER1_type 0 2420 2348 5495 67 6 10 chr10 119090908 119091639 -26497649 - L1PA8 LINE L1 0 6172 5445 783 330 90 20 chr10 119092444 119092890 -26496398 + MLT1H LTR MaLR 73 549 0 401 204 28 0 chr10 119094883 119095025 -26494263 + (TA)n Simple_repeat Simple_repeat 2 147 0 414 353 34 65 chr10 119095099 119095391 -26493897 - MLT1K LTR MaLR -290 298 16 238 296 44 7 chr10 119096365 119096500 -26492788 - L1MC4 LINE L1 -797 7245 7106 506 340 75 12 chr10 119097200 119097441 -26491847 - MIR SINE MIR -4 258 3 1610 137 6 116 chr10 119098287 119098624 -26490664 + AluSp SINE Alu 1 300 -13 340 200 24 35 chr10 119098870 119098884 -26490404 - MER46A DNA MER2_type -78 158 146 2033 151 31 26 chr10 119098884 119099235 -26490053 + MER46B DNA MER2_type 1 228 -8 276 377 53 0 chr10 119100495 119100609 -26488679 - L2 LINE L2 -2 3270 3151 1692 157 8 0 chr10 119100858 119101119 -26488169 + AluSx SINE Alu 40 302 -10 203 341 12 24 chr10 119101179 119101264 -26488024 - L2 LINE L2 -206 3066 2983 641 279 73 25 chr10 119101432 119101636 -26487652 + MIR SINE MIR 16 229 -33 2129 173 8 24 chr10 119101933 119102025 -26487263 + MLT1A1 LTR MaLR 1 93 -272 1448 169 214 11 chr10 119102025 119102381 -26486907 - MSTA LTR MaLR 0 428 1 2129 173 8 24 chr10 119102381 119102659 -26486629 + MLT1A1 LTR MaLR 93 365 0 208 163 0 41 chr10 119103784 119103833 -26485455 + GA-rich Low_complexity Low_complexity 2 48 0 707 194 85 61 chr10 119104146 119104393 -26484895 + Charlie5 DNA MER1_type 2372 2624 0 379 233 78 0 chr10 119104776 119104879 -26484409 + HAL1 LINE L1 1306 1416 -1091 866 241 60 51 chr10 119104889 119105225 -26484063 + MER2 DNA MER2_type 1 339 -6 779 235 71 143 chr10 119105339 119105959 -26483329 - MLT1H1 LTR MaLR -10 580 2 359 337 57 16 chr10 119105965 119106158 -26483130 + HAL1 LINE L1 1565 1765 -742 21 0 0 0 chr10 119106400 119106421 -26482867 + AT_rich Low_complexity Low_complexity 1 21 0 335 203 0 98 chr10 119106469 119106592 -26482696 + HAL1 LINE L1 2287 2397 -110 402 292 211 22 chr10 119106603 119106925 -26482363 + L3 LINE CR1 1083 1465 -112 2175 94 0 3 chr10 119107004 119107303 -26481985 + AluY SINE Alu 1 298 -13 393 254 188 0 chr10 119107473 119107638 -26481650 - MER117 DNA MER1_type -1 196 1 265 315 133 21 chr10 119107800 119107943 -26481345 + MER91B DNA MER1_type 7 165 -25 267 358 60 20 chr10 119108029 119108180 -26481108 - MIR3 SINE MIR -36 172 16 195 42 0 0 chr10 119108467 119108491 -26480797 + (A)n Simple_repeat Simple_repeat 1 24 0 2118 111 3 0 chr10 119108882 119109170 -26480118 + AluSx SINE Alu 3 291 -21 303 301 66 47 chr10 119109323 119109517 -26479771 - MIR SINE MIR -59 203 12 240 86 0 0 chr10 119109883 119109918 -26479370 + (TG)n Simple_repeat Simple_repeat 2 36 0 256 244 47 0 chr10 119109920 119110006 -26479282 + L1MC4 LINE L1 6614 6703 -1339 331 315 0 0 chr10 119110010 119110099 -26479189 - L1MC4 LINE L1 -1339 6703 6615 235 152 0 0 chr10 119110130 119110176 -26479112 - LTR66 LTR ERVL -171 439 394 321 218 0 0 chr10 119110178 119110256 -26479032 + (TA)n Simple_repeat Simple_repeat 2 79 0 1809 202 86 37 chr10 119110259 119110714 -26478574 - MLT2B1 LTR ERVL -43 477 1 1829 77 4 31 chr10 119111074 119111333 -26477955 + AluY SINE Alu 1 252 -59 1635 175 46 7 chr10 119111718 119111882 -26477406 - AluJo SINE Alu -16 296 115 434 18 18 0 chr10 119111882 119111937 -26477351 + (TTA)n Simple_repeat Simple_repeat 2 57 0 1635 175 46 7 chr10 119111937 119112057 -26477231 - AluJo SINE Alu -197 115 1 1988 135 13 26 chr10 119113038 119113350 -26475938 - MER1A DNA MER1_type -135 394 87 4981 87 29 0 chr10 119113350 119114205 -26475083 + L1PA10 LINE L1 5078 5956 -212 2884 258 51 36 chr10 119115117 119116224 -26473064 - L1M4 LINE L1 -1398 4748 3626 453 257 28 60 chr10 119116235 119116699 -26472589 - L1M4 LINE L1 -2623 3523 2988 * 1596 228 16 9 chr10 119116659 119117088 -26472200 + L1M4 LINE L1 4080 4511 -1635 17409 114 14 9 chr10 119117090 119119849 -26469439 + L1P LINE L1 1158 3928 -2218 1960 148 10 0 chr10 119120600 119120897 -26468391 - AluSg SINE Alu -10 300 1 969 237 81 74 chr10 119123251 119123874 -26465414 + L1MEc LINE L1 2055 2639 -3576 * 1646 212 41 5 chr10 119123861 119124248 -26465040 - L1MB5 LINE L1 -1 6173 5773 636 186 36 0 chr10 119124244 119124384 -26464904 + L1M4 LINE L1 5061 5205 -941 * 1114 241 9 28 chr10 119124376 119124699 -26464589 - L1MB5 LINE L1 -1587 4559 4243 21 57 0 0 chr10 119124719 119124754 -26464534 + AT_rich Low_complexity Low_complexity 1 35 0 5735 10 0 0 chr10 119125482 119126110 -26463178 - L1HS LINE L1 -1 6154 5527 2447 7 0 0 chr10 119126111 119126391 -26462897 + L1P1 LINE L1 5254 5533 -622 23 0 0 0 chr10 119127145 119127168 -26462120 + AT_rich Low_complexity Low_complexity 1 23 0 186 71 0 0 chr10 119127794 119127822 -26461466 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 2165 110 4 0 chr10 119127826 119128107 -26461181 - AluSx SINE Alu -30 282 1 579 284 81 32 chr10 119128412 119128697 -26460591 + MLT1L LTR MaLR 315 613 -2 2520 52 0 7 chr10 119129454 119129760 -26459528 + AluY SINE Alu 1 304 -7 2034 98 34 17 chr10 119130913 119131208 -26458080 + AluSg SINE Alu 1 300 -10 354 23 0 0 chr10 119131307 119131350 -26457938 + (TG)n Simple_repeat Simple_repeat 2 44 0 276 198 187 11 chr10 119131409 119131500 -26457788 + MIR SINE MIR 91 197 -65 21 0 0 0 chr10 119132382 119132403 -26456885 + AT_rich Low_complexity Low_complexity 1 21 0 418 307 100 4 chr10 119133013 119133244 -26456044 - MLT1L LTR MaLR -17 598 346 2271 101 0 7 chr10 119134055 119134353 -26454935 + AluSx SINE Alu 1 296 -16 220 391 56 15 chr10 119134544 119134741 -26454547 - MIR3 SINE MIR -1 207 3 342 322 44 22 chr10 119134750 119134933 -26454355 + MIR SINE MIR 4 190 -72 697 257 6 0 chr10 119135193 119135364 -26453924 + MIR SINE MIR 85 256 -6 2119 123 10 3 chr10 119135926 119136234 -26453054 + AluSx SINE Alu 3 312 0 594 226 136 17 chr10 119136622 119136799 -26452489 + MER58A DNA MER1_type 27 224 0 24 0 0 0 chr10 119136992 119137016 -26452272 + AT_rich Low_complexity Low_complexity 1 24 0 24 0 0 0 chr10 119137120 119137144 -26452144 + AT_rich Low_complexity Low_complexity 1 24 0 304 307 18 15 chr10 119137251 119137421 -26451867 - MIR SINE MIR 0 262 48 7134 65 15 1 chr10 119137552 119138702 -26450586 + L1PA7 LINE L1 4992 6154 0 1413 234 130 47 chr10 119138712 119139311 -26449977 - L1MC4 LINE L1 -149 7893 7245 183 80 0 0 chr10 119139311 119139336 -26449952 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 638 208 42 42 chr10 119139366 119139534 -26449754 - L1MC4 LINE L1 -1004 7038 6871 714 155 22 142 chr10 119139588 119139814 -26449474 - L1MA10 LINE L1 -2 6332 6134 890 242 139 39 chr10 119139888 119140218 -26449070 + MLT1A1 LTR MaLR 1 363 -2 496 231 8 30 chr10 119140233 119140367 -26448921 - L1MC4 LINE L1 -1435 6607 6477 188 196 0 20 chr10 119140733 119140784 -26448504 + GA-rich Low_complexity Low_complexity 2 51 0 291 56 56 0 chr10 119141216 119141270 -26448018 + (TG)n Simple_repeat Simple_repeat 2 58 0 708 254 124 5 chr10 119141957 119142174 -26447114 + MIR SINE MIR 9 251 -11 353 299 31 21 chr10 119142402 119142499 -26446789 - L2 LINE L2 -26 3246 3149 449 288 34 34 chr10 119143463 119143609 -26445679 + MIR SINE MIR 110 255 -7 238 354 31 0 chr10 119145218 119145314 -26443974 - L3 LINE CR1 -111 1466 1368 210 154 0 0 chr10 119145420 119145459 -26443829 + A-rich Low_complexity Low_complexity 1 39 0 23 0 0 0 chr10 119145543 119145566 -26443722 + AT_rich Low_complexity Low_complexity 1 23 0 320 288 68 40 chr10 119145974 119146151 -26443137 + MIR SINE MIR 57 238 -24 21 57 0 0 chr10 119146159 119146194 -26443094 + AT_rich Low_complexity Low_complexity 1 35 0 243 354 60 62 chr10 119146312 119146665 -26442623 + L2 LINE L2 2850 3201 -71 196 264 126 0 chr10 119146725 119146812 -26442476 - L2 LINE L2 -2 3311 3214 24 32 0 0 chr10 119147186 119147217 -26442071 + AT_rich Low_complexity Low_complexity 1 31 0 2197 119 0 0 chr10 119147284 119147577 -26441711 - AluSg SINE Alu -17 293 1 1440 192 111 90 chr10 119148645 119149265 -26440023 + L1MDa LINE L1 1924 2556 -3984 326 308 29 0 chr10 119149376 119149480 -26439808 - L3 LINE CR1 -103 1474 1368 307 145 79 13 chr10 119149555 119149631 -26439657 + L1MDa LINE L1 2570 2650 -3890 927 241 0 0 chr10 119149646 119149837 -26439451 - MER54A LTR ERVL -17 884 694 * 1599 209 10 3 chr10 119149834 119150136 -26439152 - MER54A LTR ERVL -597 304 1 818 246 35 11 chr10 119150145 119150428 -26438860 + L1MDa LINE L1 2693 2974 -3566 237 296 30 52 chr10 119150462 119150597 -26438691 + MIR SINE MIR 113 244 -18 1005 244 37 60 chr10 119151574 119151926 -26437362 - LTR9 LTR ERV1 0 612 269 2087 100 32 10 chr10 119151927 119152237 -26437051 - HUERS-P3b LTR ERV1 -5122 2296 1980 322 312 139 55 chr10 119153227 119153557 -26435731 + L1MEc LINE L1 27 384 -6012 621 197 83 0 chr10 119153892 119154024 -26435264 + L1MB8 LINE L1 6034 6176 -2 264 325 0 0 chr10 119154112 119154189 -26435099 + (CATA)n Simple_repeat Simple_repeat 4 80 0 926 228 35 48 chr10 119154262 119154552 -26434736 + pTR5 LTR ERV1 743 1028 -1410 946 66 177 0 chr10 119154631 119154780 -26434508 + LTR12 LTR ERV1 1 1613 -551 36674 94 6 10 chr10 119154946 119159936 -26429352 - HERV9 LTR ERV1 -3430 4969 1 5480 90 24 92 chr10 119159936 119160823 -26428465 - LTR12 LTR ERV1 0 826 1 6742 111 8 9 chr10 119160903 119162092 -26427196 - Harlequin LTR ERV1 0 8399 504 687 154 146 15 chr10 119162088 119162355 -26426933 - Harlequin LTR ERV1 -5755 1141 840 * 28805 99 13 8 chr10 119162322 119166374 -26422914 - Harlequin LTR ERV1 -3425 4974 903 1012 227 27 0 chr10 119166519 119166775 -26422513 + L1M4 LINE L1 5107 5369 -777 26 50 0 0 chr10 119166855 119166895 -26422393 + AT_rich Low_complexity Low_complexity 1 40 0 460 245 65 22 chr10 119167897 119168036 -26421252 - MIR SINE MIR -55 207 63 2020 133 3 7 chr10 119168758 119169058 -26420230 - AluSx SINE Alu -13 299 1 194 67 33 67 chr10 119170125 119170185 -26419103 + (CAAAA)n Simple_repeat Simple_repeat 3 60 0 1755 169 0 25 chr10 119170677 119170991 -26418297 + AluJb SINE Alu 1 306 -6 198 344 120 16 chr10 119171059 119171184 -26418104 - MIR SINE MIR -76 186 49 366 182 0 0 chr10 119172053 119172120 -26417168 + CT-rich Low_complexity Low_complexity 1 70 -18 279 54 0 0 chr10 119172120 119172157 -26417131 + (CA)n Simple_repeat Simple_repeat 1 37 0 366 182 0 0 chr10 119172157 119172177 -26417111 + CT-rich Low_complexity Low_complexity 69 88 0 596 286 74 0 chr10 119172274 119172463 -26416825 + MIR SINE MIR 44 246 -16 288 0 0 0 chr10 119173931 119173963 -26415325 + (CA)n Simple_repeat Simple_repeat 1 32 0 1848 190 51 3 chr10 119175907 119176238 -26413050 + MLT1A1 LTR MaLR 1 347 -18 253 358 87 63 chr10 119177177 119177635 -26411653 + L2 LINE L2 2804 3272 0 228 381 52 0 chr10 119178113 119178210 -26411078 - L2 LINE L2 -14 3258 3157 263 261 174 11 chr10 119179501 119179593 -26409695 + L2 LINE L2 3162 3268 -4 216 0 0 0 chr10 119179674 119179698 -26409590 + (TA)n Simple_repeat Simple_repeat 2 25 0 224 224 20 0 chr10 119180567 119180616 -26408672 + (TG)n Simple_repeat Simple_repeat 1 50 0 2291 99 0 3 chr10 119180807 119181119 -26408169 + AluY SINE Alu 1 311 0 221 331 8 10 chr10 119181536 119181640 -26407648 - MIR SINE MIR -66 142 59 333 0 0 0 chr10 119181739 119181776 -26407512 + (TG)n Simple_repeat Simple_repeat 1 37 0 300 27 0 0 chr10 119181775 119181812 -26407476 + (GA)n Simple_repeat Simple_repeat 1 37 0 * 1238 174 13 21 chr10 119182033 119182268 -26407020 + AluJo SINE Alu 51 283 -29 279 54 0 0 chr10 119182297 119182334 -26406954 + (CA)n Simple_repeat Simple_repeat 2 38 0 721 236 122 27 chr10 119182525 119182852 -26406436 - MER57A LTR ERV1 0 403 105 1840 142 46 27 chr10 119183399 119183651 -26405637 + MER7A DNA MER2_type 1 262 -2776 1789 183 155 155 chr10 119183651 119184231 -26405057 - LTR28 LTR ERV1 0 1020 438 2095 114 0 0 chr10 119184231 119184504 -26404784 + AluSg SINE Alu 1 273 -37 1789 183 155 155 chr10 119184504 119184942 -26404346 - LTR28 LTR ERV1 -581 439 2 1840 142 46 27 chr10 119184942 119185028 -26404260 + MER7A DNA MER2_type 262 345 -1 342 222 14 0 chr10 119185192 119185264 -26404024 - Tigger5 DNA MER2_type -14 2309 2237 227 191 73 59 chr10 119185305 119185373 -26403915 - Tigger5 DNA MER2_type -4 2319 2251 386 287 91 22 chr10 119186472 119186701 -26402587 - MIR SINE MIR -14 248 1 1730 103 39 0 chr10 119186771 119187003 -26402285 + AluSx SINE Alu 58 298 -14 420 279 102 78 chr10 119187082 119187326 -26401962 - MIR SINE MIR 0 262 13 304 267 133 13 chr10 119187622 119187772 -26401516 + L1ME4a LINE L1 5950 6117 -4 23 0 0 0 chr10 119188234 119188257 -26401031 + AT_rich Low_complexity Low_complexity 1 23 0 187 294 29 0 chr10 119189854 119189922 -26399366 + L2 LINE L2 3182 3251 -21 709 303 66 22 chr10 119190059 119190287 -26399001 - MIR SINE MIR -16 246 9 252 295 0 0 chr10 119190340 119190401 -26398887 + Charlie8 DNA MER1_type 2356 2416 -1 212 329 43 0 chr10 119190551 119190621 -26398667 - MIR SINE MIR -116 146 74 212 231 46 15 chr10 119191215 119191280 -26398008 + MIR SINE MIR 100 166 -96 422 287 36 24 chr10 119191969 119192136 -26397152 + MIR SINE MIR 92 260 -2 2259 146 22 0 chr10 119192276 119192632 -26396656 - THE1B LTR MaLR 0 364 1 2255 79 3 55 chr10 119192695 119193023 -26396265 - AluY SINE Alu 0 311 1 730 318 142 19 chr10 119193262 119193747 -26395541 - MLT1K LTR MaLR 0 588 44 192 350 70 30 chr10 119194037 119194137 -26395151 + L2 LINE L2 3202 3305 -8 405 332 121 26 chr10 119194838 119195070 -26394218 - MIR SINE MIR -3 259 6 461 274 37 0 chr10 119195348 119195483 -26393805 - LTR16C LTR ERVL -16 475 336 228 111 0 0 chr10 119195824 119195860 -26393428 + (TG)n Simple_repeat Simple_repeat 1 36 0 4927 108 22 67 chr10 119196273 119197138 -26392150 - LTR12 LTR ERV1 0 826 1 2361 175 20 40 chr10 119197218 119197716 -26391572 - pTR5 LTR ERV1 -1410 1028 541 915 108 43 0 chr10 119197727 119197866 -26391422 + LTR57-int LTR ERVL 1065 1209 -4134 4538 247 57 27 chr10 119198019 119198572 -26390716 - L1M LINE L1 -777 5369 4834 1443 212 14 10 chr10 119198572 119198865 -26390423 - AluJo SINE Alu -14 298 5 4538 247 57 27 chr10 119198865 119199959 -26389329 - L1M LINE L1 -1312 4834 3688 935 252 13 86 chr10 119199977 119200489 -26388799 - L1M4 LINE L1 -2851 3295 2834 2009 128 0 24 chr10 119200489 119200785 -26388503 - AluSx SINE Alu -23 289 1 935 252 13 86 chr10 119200785 119200886 -26388402 - L1M4 LINE L1 -3312 2834 2727 581 107 38 92 chr10 119201246 119201377 -26387911 - L1MA6 LINE L1 -404 5896 5773 1053 111 126 5 chr10 119201377 119201575 -26387713 + L1MA6 LINE L1 6078 6300 0 547 245 25 31 chr10 119201576 119201735 -26387553 + L1MB5 LINE L1 592 749 -5793 227 159 0 45 chr10 119201764 119201808 -26387480 + L1M4 LINE L1 1405 1446 -5119 2839 224 58 38 chr10 119201880 119203664 -26385624 + L1MB5 LINE L1 823 2756 -3890 3099 201 10 7 chr10 119203680 119204368 -26384920 - L1 LINE L1 -1081 5065 4376 2387 7 0 0 chr10 119205621 119205901 -26383387 - L1P1 LINE L1 -622 5533 5254 5648 6 0 0 chr10 119205902 119206529 -26382759 + L1HS LINE L1 5527 6153 -2 186 43 0 0 chr10 119206625 119206648 -26382640 + (T)n Simple_repeat Simple_repeat 1 23 0 206 214 0 0 chr10 119206959 119207001 -26382287 + (CCCTG)n Simple_repeat Simple_repeat 3 44 0 21 57 0 0 chr10 119207258 119207293 -26381995 + AT_rich Low_complexity Low_complexity 1 35 0 1096 232 12 28 chr10 119207313 119207632 -26381656 + L1MB5 LINE L1 4741 5054 -1590 613 186 36 0 chr10 119207627 119207767 -26381521 - L1M4 LINE L1 -941 5274 5130 * 1590 212 41 5 chr10 119207763 119208150 -26381138 + L1MB5 LINE L1 6271 6671 -1 904 241 66 55 chr10 119208137 119208760 -26380528 - L1MEc LINE L1 -3576 2639 2055 * 1960 148 10 0 chr10 119211114 119211411 -26377877 + AluSg SINE Alu 1 300 -10 24453 36 1 1 chr10 119212162 119215179 -26374109 - L1PA3 LINE L1 -2218 3928 910 12181 25 1 0 chr10 119215179 119217394 -26371894 + L1PA3 LINE L1 3931 6152 -3 1857 131 88 20 chr10 119218571 119218922 -26370366 - THE1C LTR MaLR 0 375 1 1428 147 15 31 chr10 119218926 119219039 -26370249 - L1M2 LINE L1 -598 5693 5580 1507 192 7 19 chr10 119219039 119219347 -26369941 + AluJo SINE Alu 3 306 -6 1428 147 15 31 chr10 119219347 119219492 -26369796 - L1M2 LINE L1 -711 5580 5439 501 189 9 0 chr10 119219499 119219610 -26369678 + L1MA8 LINE L1 6177 6288 -3 39 38 0 0 chr10 119219610 119219663 -26369625 + AT_rich Low_complexity Low_complexity 1 53 0 437 264 124 31 chr10 119219692 119219758 -26369530 + L1M4 LINE L1 1220 1278 -5264 216 0 0 0 chr10 119219758 119219782 -26369506 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 437 264 124 31 chr10 119219782 119219973 -26369315 + L1M4 LINE L1 1278 1501 -5041 244 229 71 0 chr10 119219983 119220053 -26369235 - L1MEc LINE L1 -4300 2096 2022 927 213 64 21 chr10 119220053 119220288 -26369000 + MLT1D LTR MaLR 1 245 -260 929 269 76 0 chr10 119220294 119220595 -26368693 + MLT1D LTR MaLR 182 505 0 651 215 36 101 chr10 119220637 119220856 -26368432 + MER20 DNA MER1_type 7 211 -8 322 226 16 32 chr10 119220874 119220998 -26368290 - L1MEc LINE L1 -4411 1985 1864 3512 210 47 16 chr10 119221009 119222258 -26367030 - L1MB8 LINE L1 -2 6176 4887 2270 118 3 0 chr10 119222388 119222694 -26366594 - AluSg SINE Alu -3 307 1 1360 274 22 65 chr10 119223233 119223654 -26365634 - LTR16C LTR ERVL 0 491 94 2243 203 23 49 chr10 119223654 119224182 -26365106 - MLT2B2 LTR ERVL 0 515 2 1360 274 22 65 chr10 119224182 119224270 -26365018 - LTR16C LTR ERVL -397 94 4 225 359 38 15 chr10 119224685 119224816 -26364472 - L2 LINE L2 0 3313 3180 390 337 78 26 chr10 119225174 119225367 -26363921 + MIR SINE MIR 28 230 -32 187 167 74 74 chr10 119225372 119225426 -26363862 + L2 LINE L2 3245 3298 -15 189 0 0 0 chr10 119227372 119227393 -26361895 + (CAAAA)n Simple_repeat Simple_repeat 3 23 0 406 336 75 22 chr10 119229119 119229345 -26359943 - MIR SINE MIR -19 243 6 22 35 0 0 chr10 119229897 119229926 -26359362 + AT_rich Low_complexity Low_complexity 1 29 0 235 271 34 119 chr10 119229952 119230129 -26359159 - MIR SINE MIR -55 207 46 492 333 70 16 chr10 119231159 119231402 -26357886 + MIR SINE MIR 5 260 -2 1576 156 207 11 chr10 119231482 119231840 -26357448 + MSTA LTR MaLR 1 428 0 416 279 68 12 chr10 119232980 119233141 -26356147 + MIR SINE MIR 66 235 -27 2088 130 0 3 chr10 119233701 119233986 -26355302 + AluSq SINE Alu 1 284 -29 563 318 33 19 chr10 119235139 119235353 -26353935 - LTR16A LTR ERVL -158 292 76 1711 201 0 6 chr10 119235604 119235918 -26353370 - AluJo SINE Alu 0 312 1 1010 301 67 13 chr10 119235965 119236108 -26353180 - HERV16 LTR ERVL -3552 1444 1310 2361 160 74 7 chr10 119236108 119236540 -26352748 - LOR1b LTR ERV1 0 461 1 1010 301 67 13 chr10 119236540 119236858 -26352430 - HERV16 LTR ERVL -3686 1310 958 242 208 0 0 chr10 119237429 119237477 -26351811 + A-rich Low_complexity Low_complexity 4 51 0 7903 25 2 0 chr10 119237547 119239309 -26349979 - L1HS LINE L1 -1 6154 4388 325 309 30 42 chr10 119240193 119240358 -26348930 - MIR SINE MIR -10 252 90 24 67 0 0 chr10 119240358 119240403 -26348885 + AT_rich Low_complexity Low_complexity 1 45 0 463 135 218 118 chr10 119240709 119240879 -26348409 + MER5A DNA MER1_type 1 187 -2 312 294 73 43 chr10 119241775 119241926 -26347362 + L2 LINE L2 2916 3069 -203 348 145 116 0 chr10 119242084 119242153 -26347135 - L1MDa LINE L1 -6450 90 14 1029 172 9 42 chr10 119242309 119242397 -26346891 - MER3 DNA MER1_type 0 209 120 2020 126 36 3 chr10 119242397 119242698 -26346590 + AluSp SINE Alu 1 311 -2 1029 172 9 42 chr10 119242698 119242824 -26346464 - MER3 DNA MER1_type -89 120 2 27 29 0 0 chr10 119243077 119243111 -26346177 + AT_rich Low_complexity Low_complexity 1 34 0 414 171 0 43 chr10 119243150 119243220 -26346068 + FRAM SINE Alu 65 131 -45 241 276 41 41 chr10 119243516 119243614 -26345674 - MIR SINE MIR -58 204 107 833 203 46 85 chr10 119243643 119243948 -26345340 + LTR37B LTR ERV1 6 298 -170 1198 154 0 5 chr10 119243982 119244177 -26345111 + LTR29 LTR ERV1 425 618 -4 1806 85 4 23 chr10 119244211 119244469 -26344819 - AluY SINE Alu -4 307 55 466 304 44 24 chr10 119244524 119244774 -26344514 - L1MC/D LINE L1 -2138 5670 5416 3846 177 30 7 chr10 119244818 119245523 -26343765 - MER72 LTR ERV1 0 722 2 8729 22 4 0 chr10 119246203 119247410 -26341878 - L1P1 LINE L1 -647 5508 4299 206 327 0 26 chr10 119247926 119248039 -26341249 + C-rich Low_complexity Low_complexity 3 112 0 890 112 22 22 chr10 119248042 119248220 -26341068 + CT-rich Low_complexity Low_complexity 1 178 0 212 411 16 0 chr10 119248340 119248464 -26340824 + L3 LINE CR1 1366 1491 -86 24 0 0 0 chr10 119248926 119248950 -26340338 + AT_rich Low_complexity Low_complexity 1 24 0 561 148 0 10 chr10 119248997 119249098 -26340190 - U6 snRNA snRNA -7 100 1 317 286 103 18 chr10 119249351 119249509 -26339779 - MIR SINE MIR -67 141 3 326 272 29 0 chr10 119250635 119250738 -26338550 - MIR SINE MIR -40 222 117 344 308 93 23 chr10 119251061 119251233 -26338055 + MIR3 SINE MIR 23 206 -2 1320 211 42 63 chr10 119251477 119251950 -26337338 - LTR37B LTR ERV1 0 468 6 255 265 41 41 chr10 119251979 119252077 -26337211 + MIR SINE MIR 107 204 -58 418 171 80 34 chr10 119252355 119252443 -26336845 - FRAM SINE Alu -20 156 65 27 29 0 0 chr10 119252482 119252516 -26336772 + AT_rich Low_complexity Low_complexity 1 34 0 1066 171 5 42 chr10 119252769 119252896 -26336392 + MER3 DNA MER1_type 2 119 -90 2048 129 33 3 chr10 119252896 119253198 -26336090 - AluSp SINE Alu -2 311 1 1066 171 5 42 chr10 119253198 119253286 -26336002 + MER3 DNA MER1_type 119 209 0 348 145 116 0 chr10 119253442 119253511 -26335777 + L1MDa LINE L1 14 90 -6450 312 294 73 43 chr10 119253669 119253820 -26335468 - L2 LINE L2 -203 3069 2916 463 135 218 118 chr10 119254716 119254886 -26334402 - MER5A DNA MER1_type -2 187 1 24 67 0 0 chr10 119255192 119255237 -26334051 + AT_rich Low_complexity Low_complexity 1 45 0 325 309 30 42 chr10 119255237 119255402 -26333886 + MIR SINE MIR 90 252 -10 257 309 186 29 chr10 119256205 119256409 -26332879 + MIR SINE MIR 12 247 -15 2014 123 55 30 chr10 119256444 119256810 -26332478 + THE1C LTR MaLR 1 375 0 814 253 51 63 chr10 119257292 119257707 -26331581 + MER92A LTR ERV1 3 412 0 206 238 0 0 chr10 119257807 119257849 -26331439 + (TG)n Simple_repeat Simple_repeat 2 43 0 274 248 120 23 chr10 119257896 119258029 -26331259 - MIR SINE MIR 0 262 117 1462 179 65 31 chr10 119258466 119258757 -26330531 + AluJo SINE Alu 1 301 -11 40290 38 24 1 chr10 119259101 119265115 -26324173 - L1PA2 LINE L1 0 6155 2 253 236 0 0 chr10 119267316 119267371 -26321917 - MLT1D LTR MaLR -450 55 1 1896 103 7 11 chr10 119267515 119267786 -26321502 - AluSc SINE Alu 0 309 40 213 222 0 22 chr10 119267894 119267939 -26321349 + (CCTA)n Simple_repeat Simple_repeat 2 45 0 267 287 0 40 chr10 119268666 119268767 -26320521 + (CCTA)n Simple_repeat Simple_repeat 2 98 0 210 241 19 0 chr10 119268968 119269022 -26320266 + (ATG)n Simple_repeat Simple_repeat 1 55 0 278 205 72 0 chr10 119269939 119270022 -26319266 + MLT1J1 LTR MaLR 353 441 -5 1866 121 18 7 chr10 119270597 119270869 -26318419 - AluSc SINE Alu -11 298 24 31 44 0 0 chr10 119271114 119271159 -26318129 + AT_rich Low_complexity Low_complexity 1 45 0 207 114 0 0 chr10 119271179 119271214 -26318074 + (TA)n Simple_repeat Simple_repeat 1 35 0 232 217 0 0 chr10 119271455 119271501 -26317787 + LTR53 LTR ERVL 472 517 -2 223 287 85 32 chr10 119271612 119271706 -26317582 + MER5A DNA MER1_type 72 170 -8 397 240 41 94 chr10 119272539 119272710 -26316578 + MIR SINE MIR 4 165 -97 255 327 13 47 chr10 119272770 119272920 -26316368 + MLT1K LTR MaLR 126 270 -318 3030 158 16 8 chr10 119273239 119273625 -26315663 + MER41E LTR ERV1 1 393 -119 2273 132 0 0 chr10 119273625 119273935 -26315353 - AluSg SINE Alu 0 310 1 3030 158 16 8 chr10 119273935 119274056 -26315232 + MER41E LTR ERV1 393 512 0 193 260 154 48 chr10 119274147 119274251 -26315037 + MIR SINE MIR 147 261 -1 2105 131 44 19 chr10 119274484 119274850 -26314438 + THE1C LTR MaLR 1 375 0 418 197 17 0 chr10 119275657 119275774 -26313514 + (TA)n Simple_repeat Simple_repeat 1 119 0 502 261 11 72 chr10 119275783 119275963 -26313325 + MLT1J2 LTR MaLR 3 171 -279 311 157 102 0 chr10 119276107 119276183 -26313105 + MLT1J2 LTR MaLR 354 438 -8 285 282 82 9 chr10 119276310 119276420 -26312868 + MIR SINE MIR 78 195 -67 21 0 0 0 chr10 119276947 119276968 -26312320 + AT_rich Low_complexity Low_complexity 1 21 0 267 331 145 0 chr10 119278118 119278290 -26310998 + Charlie8 DNA MER1_type 90 286 -2131 2153 122 3 0 chr10 119278709 119279004 -26310284 + AluSg SINE Alu 1 296 -14 804 247 67 14 chr10 119279099 119279322 -26309966 + MIR SINE MIR 25 259 -3 542 263 55 55 chr10 119279472 119279689 -26309599 - L2 LINE L2 -9 3304 3088 2293 63 6 60 chr10 119280563 119280881 -26308407 + AluY SINE Alu 3 303 -8 230 263 0 66 chr10 119281815 119281891 -26307397 + MIR SINE MIR 72 142 -66 310 344 83 13 chr10 119282207 119282364 -26306924 - MER5B DNA MER1_type 0 178 11 300 299 0 43 chr10 119282492 119282609 -26306679 + MER77 LTR ERV1 79 190 -415 35 71 0 0 chr10 119282995 119283065 -26306223 + AT_rich Low_complexity Low_complexity 1 70 0 1585 196 0 48 chr10 119283066 119283378 -26305910 - AluJo SINE Alu -15 297 1 353 308 15 8 chr10 119284035 119284168 -26305120 - MIR SINE MIR -115 147 14 246 202 0 0 chr10 119285252 119285310 -26303978 - MIR SINE MIR -65 143 102 419 326 118 11 chr10 119285504 119285682 -26303606 - L3 LINE CR1 -26 1551 1355 676 274 70 33 chr10 119285797 119286038 -26303250 - REP3 LTR ERV -305 257 8 282 253 89 0 chr10 119286047 119286126 -26303162 + MIR3 SINE MIR 93 178 -30 2153 81 27 0 chr10 119286897 119287192 -26302096 - L1PA13 LINE L1 -8 6155 5853 25 51 0 0 chr10 119288326 119288365 -26300923 + AT_rich Low_complexity Low_complexity 1 39 0 261 254 169 17 chr10 119288393 119288511 -26300777 + MIR SINE MIR 114 249 -13 581 306 64 18 chr10 119289558 119289777 -26299511 + MIR SINE MIR 32 260 -2 443 329 83 21 chr10 119289773 119290013 -26299275 - MIR SINE MIR -7 255 1 * 2428 111 0 11 chr10 119290102 119290470 -26298818 - L1PA7 LINE L1 -3623 2523 2160 18764 96 7 1 chr10 119290472 119290775 -26298513 + L1PA7 LINE L1 2516 2816 -3338 2235 110 0 3 chr10 119290775 119291076 -26298212 + AluY SINE Alu 1 300 -11 18764 96 7 1 chr10 119291076 119294357 -26294931 + L1PA7 LINE L1 2816 6150 -4 3951 171 83 8 chr10 119294717 119295485 -26293803 + LTR1B LTR ERV1 1 826 0 917 298 79 47 chr10 119295558 119296056 -26293232 - L2 LINE L2 0 3313 2794 1944 167 0 0 chr10 119296056 119296361 -26292927 - AluSx SINE Alu -5 307 3 917 298 79 47 chr10 119296361 119296493 -26292795 - L2 LINE L2 -519 2794 2668 278 328 59 25 chr10 119296605 119296724 -26292564 + L2 LINE L2 3150 3272 0 636 14 0 0 chr10 119297047 119297120 -26292168 + (TTCC)n Simple_repeat Simple_repeat 1 73 0 685 338 39 4 chr10 119298629 119298860 -26290428 + MIR SINE MIR 2 240 -22 1908 228 97 75 chr10 119299795 119300811 -26288477 + L1ME1 LINE L1 4110 5148 -998 * 7268 234 117 49 chr10 119300807 119302574 -26286714 + L1MA5A LINE L1 58 2047 -4741 1770 102 0 8 chr10 119302574 119302832 -26286456 - AluY SINE Alu 0 305 50 7268 234 117 49 chr10 119302832 119303733 -26285555 + L1MA5A LINE L1 2047 2886 -3902 559 93 0 0 chr10 119303733 119303808 -26285480 + U5 snRNA snRNA 1 75 -41 6565 71 19 10 chr10 119303808 119304897 -26284391 + L1PA7 LINE L1 5056 6152 -2 698 158 8 0 chr10 119304897 119305017 -26284271 + L1MA5A LINE L1 2882 3002 -3786 4293 150 33 18 chr10 119305024 119305500 -26283788 + L1MA5A LINE L1 6099 6567 -372 2114 138 0 0 chr10 119305500 119305791 -26283497 + AluSx SINE Alu 1 291 -21 4293 150 33 18 chr10 119305791 119305862 -26283426 + L1MA5A LINE L1 6567 6635 -304 1955 140 135 26 chr10 119305862 119306248 -26283040 + MSTA LTR MaLR 1 428 0 4293 150 33 18 chr10 119306248 119306524 -26282764 + L1MA5A LINE L1 6635 6935 -4 351 226 38 9 chr10 119306532 119306638 -26282650 + L1ME1 LINE L1 5134 5242 -904 239 157 45 0 chr10 119306638 119306727 -26282561 + (TA)n Simple_repeat Simple_repeat 1 93 0 342 256 11 11 chr10 119306733 119306823 -26282465 + L1MC4 LINE L1 6614 6703 -1339 328 220 55 33 chr10 119306747 119306838 -26282450 - L1MC4 LINE L1 -1339 6703 6611 * 758 192 0 0 chr10 119306887 119307012 -26282276 - FLAM_C SINE Alu -13 130 6 399 248 43 7 chr10 119307017 119307158 -26282130 + L1ME1 LINE L1 5261 5406 -953 1384 256 57 30 chr10 119307174 119307646 -26281642 + MER74B LTR ERVL 81 565 -57 1838 271 52 16 chr10 119307714 119308385 -26280903 + L1ME1 LINE L1 5417 6111 -55 2325 258 77 21 chr10 119308429 119308859 -26280429 + L1ME1 LINE L1 5176 5581 -585 1436 186 13 42 chr10 119308859 119309170 -26280118 - AluSx SINE Alu 0 302 1 2325 258 77 21 chr10 119309170 119309676 -26279612 + L1ME1 LINE L1 5581 6161 -5 292 190 76 13 chr10 119309702 119309781 -26279507 + L1MC5 LINE L1 7824 7907 -54 353 397 27 8 chr10 119309799 119310061 -26279227 + L1ME3A LINE L1 5488 5754 -2054 223 264 0 99 chr10 119310199 119310245 -26279043 - MIR SINE MIR -174 88 54 1408 234 33 17 chr10 119310245 119310604 -26278684 - MLT1A1 LTR MaLR 0 365 1 223 264 0 99 chr10 119310604 119310648 -26278640 - MIR SINE MIR -208 54 7 934 197 35 46 chr10 119311119 119311239 -26278049 + L1ME3A LINE L1 5911 6031 -139 2183 106 47 33 chr10 119311239 119311598 -26277690 + THE1B LTR MaLR 1 364 0 934 197 35 46 chr10 119311598 119311736 -26277552 + L1ME3A LINE L1 6031 6166 -4 378 279 50 57 chr10 119311803 119311943 -26277345 - MLT1J2 LTR MaLR -45 405 267 246 320 97 0 chr10 119312000 119312103 -26277185 - MLT1J1 LTR MaLR -270 176 64 2106 162 93 5 chr10 119312626 119313016 -26276272 - MSTB LTR MaLR 0 413 1 33 0 0 0 chr10 119313270 119313303 -26275985 + AT_rich Low_complexity Low_complexity 1 33 0 487 295 40 14 chr10 119314961 119315174 -26274114 - MIR SINE MIR 0 262 45 545 273 103 42 chr10 119315299 119315680 -26273608 + LTR16A1 LTR ERVL 73 457 0 531 146 0 0 chr10 119316757 119316839 -26272449 + AluJ/FLAM SINE Alu 3 84 -228 1391 206 23 26 chr10 119318151 119318461 -26270827 + AluJo SINE Alu 1 309 -3 198 0 0 0 chr10 119319080 119319102 -26270186 + (TAAA)n Simple_repeat Simple_repeat 1 22 0 230 339 33 16 chr10 119319335 119319456 -26269832 + MER5A DNA MER1_type 8 130 -59 1154 236 25 16 chr10 119319687 119320071 -26269217 - MLT2D LTR ERVL -69 395 1 365 188 23 120 chr10 119320071 119320204 -26269084 + MLT1B LTR MaLR 132 251 -139 1049 192 38 116 chr10 119320406 119320802 -26268486 + MLT1A1 LTR MaLR 1 365 0 332 270 95 15 chr10 119321255 119321392 -26267896 - MIR SINE MIR -43 219 72 469 305 56 30 chr10 119323275 119323508 -26265780 - L2 LINE L2 -476 2838 2600 343 308 51 0 chr10 119324461 119324578 -26264710 - L2 LINE L2 0 3313 3191 874 359 29 10 chr10 119324785 119325203 -26264085 + LTR16A LTR ERVL 17 442 -8 2619 100 17 6 chr10 119325261 119325621 -26263667 + THE1B LTR MaLR 1 364 0 554 269 30 0 chr10 119326863 119326997 -26262291 + MIR SINE MIR 88 225 -37 1284 104 21 12 chr10 119326999 119327216 -26262072 - MLT2A2 LTR ERVL 0 453 293 2962 106 81 20 chr10 119327252 119327761 -26261527 + L1MA1 LINE L1 5763 6302 0 490 278 166 0 chr10 119327968 119328119 -26261169 - MER5A DNA MER1_type -1 188 13 295 281 65 92 chr10 119328840 119329057 -26260231 - MIR SINE MIR -2 260 50 1150 254 89 70 chr10 119329115 119329305 -26259983 + MLT1H1 LTR MaLR 2 187 -368 2359 91 16 0 chr10 119329305 119329612 -26259676 + AluSx SINE Alu 1 312 0 1150 254 89 70 chr10 119329612 119329960 -26259328 + MLT1H1 LTR MaLR 187 550 -5 250 295 189 0 chr10 119330256 119330378 -26258910 - MIR3 SINE MIR -14 194 50 186 43 0 0 chr10 119330399 119330422 -26258866 + (TA)n Simple_repeat Simple_repeat 2 24 0 270 258 53 68 chr10 119330516 119330648 -26258640 + MER5B DNA MER1_type 1 130 -48 1760 113 0 0 chr10 119331216 119331446 -26257842 + AluSx SINE Alu 61 290 -22 611 331 16 0 chr10 119331591 119331775 -26257513 + MIR SINE MIR 3 189 -73 204 40 0 0 chr10 119331909 119331934 -26257354 + (TTTC)n Simple_repeat Simple_repeat 2 26 0 1524 196 26 81 chr10 119331936 119332395 -26256893 - MER31B LTR ERV1 -29 437 4 7210 50 0 0 chr10 119333285 119334709 -26254579 - L1PA4 LINE L1 -3 6152 4729 615 288 2 1 chr10 119335757 119335974 -26253314 + L1M4 LINE L1 4383 4601 -1545 1738 220 50 44 chr10 119336001 119336428 -26252860 + L1MD2 LINE L1 5835 6267 -92 1411 220 73 48 chr10 119336428 119336882 -26252406 - MLT1C LTR MaLR -2 465 1 1738 220 50 44 chr10 119336882 119336973 -26252315 + L1MD2 LINE L1 6267 6356 -3 202 286 92 0 chr10 119337390 119337488 -26251800 + MIR SINE MIR 145 251 -11 205 133 0 44 chr10 119338312 119338357 -26250931 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 3475 166 10 63 chr10 119338430 119339160 -26250128 + LTR8 LTR ERV1 1 691 0 4637 125 5 66 chr10 119339454 119340284 -26249004 + MER4E LTR ERV1 1 779 0 33 43 0 0 chr10 119340536 119340583 -26248705 + AT_rich Low_complexity Low_complexity 1 47 0 2287 112 125 8 chr10 119340644 119341027 -26248261 + MSTA LTR MaLR 1 428 0 4571 107 8 1 chr10 119341129 119341785 -26247503 + PABL_A LTR ERV1 1 660 0 3276 162 23 13 chr10 119341901 119342513 -26246775 + LTR29 LTR ERV1 1 618 -4 1763 86 8 23 chr10 119342547 119342804 -26246484 - AluY SINE Alu -4 307 55 464 294 56 35 chr10 119342823 119343109 -26246179 - L1MC/D LINE L1 -2101 5707 5416 3846 177 30 7 chr10 119343153 119343858 -26245430 - MER72 LTR ERV1 0 722 2 212 0 36 0 chr10 119344561 119344589 -26244699 + (TC)n Simple_repeat Simple_repeat 1 29 0 285 75 0 0 chr10 119344591 119344631 -26244657 + (TG)n Simple_repeat Simple_repeat 2 41 0 2417 143 26 12 chr10 119344864 119345285 -26244003 - MSTA LTR MaLR -1 427 1 7164 169 36 99 chr10 119345285 119345629 -26243659 - MSTA-int LTR MaLR 0 1651 1287 372 22 0 0 chr10 119345629 119345674 -26243614 + (CA)n Simple_repeat Simple_repeat 2 46 0 7164 169 36 99 chr10 119345674 119347090 -26242198 - MSTA-int LTR MaLR -364 1287 1 2444 151 29 5 chr10 119347090 119347508 -26241780 - MSTA LTR MaLR 0 428 1 27 29 0 0 chr10 119347660 119347694 -26241594 + AT_rich Low_complexity Low_complexity 1 34 0 427 310 38 27 chr10 119349670 119349854 -26239434 - MIR SINE MIR -32 230 45 24 53 0 0 chr10 119350933 119350971 -26238317 + AT_rich Low_complexity Low_complexity 1 38 0 286 336 66 44 chr10 119351030 119351167 -26238121 - MIR3 SINE MIR -27 181 42 34222 98 9 8 chr10 119351174 119357315 -26231973 - L1PA6 LINE L1 -1 6153 11 1481 247 67 23 chr10 119357462 119358129 -26231159 + L1ME3A LINE L1 5195 5910 -260 1473 176 42 10 chr10 119358129 119358435 -26230853 - MER89 LTR ERV1 -53 506 191 4236 59 17 0 chr10 119358438 119358979 -26230309 - L1PA6 LINE L1 0 6154 5605 351 241 28 19 chr10 119358986 119359094 -26230194 - MER89 LTR ERV1 -448 111 3 924 212 15 27 chr10 119359101 119359360 -26229928 + L1MB8 LINE L1 5921 6176 -2 1783 35 0 0 chr10 119359468 119359694 -26229594 + L1P1 LINE L1 4373 4598 -1548 2549 18 16 0 chr10 119359710 119360163 -26229125 + L1P1 LINE L1 5121 5578 -577 24 0 0 0 chr10 119360912 119360936 -26228352 + AT_rich Low_complexity Low_complexity 1 24 0 190 56 56 0 chr10 119360975 119361011 -26228277 + (CAAA)n Simple_repeat Simple_repeat 3 40 0 184 269 64 85 chr10 119362138 119362279 -26227009 + MIR SINE MIR 119 256 -6 533 339 106 0 chr10 119362638 119362856 -26226432 - MIR SINE MIR -12 250 10 2148 114 13 13 chr10 119363252 119363559 -26225729 + AluSq SINE Alu 7 313 0 219 365 0 19 chr10 119363566 119363670 -26225618 - MER5A DNA MER1_type -50 139 38 27 29 0 0 chr10 119363794 119363828 -26225460 + AT_rich Low_complexity Low_complexity 1 34 0 278 306 25 33 chr10 119363917 119364038 -26225250 - MIR SINE MIR -46 216 97 264 290 99 38 chr10 119364354 119364485 -26224803 - MIR3 SINE MIR -30 178 40 384 264 0 0 chr10 119364536 119364623 -26224665 + MIR SINE MIR 66 152 -110 318 320 39 19 chr10 119365068 119365171 -26224117 + L2 LINE L2 3147 3251 -21 2361 68 0 36 chr10 119365195 119365503 -26223785 - AluY SINE Alu -14 297 1 484 236 209 7 chr10 119365710 119365858 -26223430 - MIR SINE MIR -77 185 8 465 301 36 30 chr10 119366142 119366308 -26222980 - MIR SINE MIR -12 250 84 746 218 0 0 chr10 119366870 119367003 -26222285 + FLAM_C SINE Alu 1 133 0 254 125 21 0 chr10 119367013 119367061 -26222227 + GA-rich Low_complexity Low_complexity 2 50 0 340 287 70 91 chr10 119367123 119367409 -26221879 + HAL1b LINE L1 1068 1347 -1 1594 225 80 17 chr10 119367439 119367914 -26221374 - MLT1D LTR MaLR 0 505 1 2382 146 0 3 chr10 119368161 119368524 -26220764 - THE1B LTR MaLR 0 364 3 284 100 0 20 chr10 119369140 119369190 -26220098 + (TCCCC)n Simple_repeat Simple_repeat 3 51 0 1655 227 98 75 chr10 119369291 119370303 -26218985 - L1M4 LINE L1 -1000 5146 4112 678 338 39 4 chr10 119371240 119371471 -26217817 - MIR SINE MIR -22 240 2 636 14 0 0 chr10 119372980 119373053 -26216235 + (GGAA)n Simple_repeat Simple_repeat 1 73 0 278 328 59 25 chr10 119373376 119373495 -26215793 - L2 LINE L2 0 3272 3150 933 298 79 47 chr10 119373607 119373739 -26215549 + L2 LINE L2 2668 2794 -519 1970 167 0 0 chr10 119373739 119374044 -26215244 + AluSx SINE Alu 3 307 -5 933 298 79 47 chr10 119374044 119374542 -26214746 + L2 LINE L2 2794 3313 0 3995 172 83 8 chr10 119374615 119375383 -26213905 - LTR1B LTR ERV1 0 826 1 32935 51 30 3 chr10 119375743 119381740 -26207548 - L1PA7 LINE L1 -4 6150 2 253 236 0 0 chr10 119383941 119383996 -26205292 - MLT1D LTR MaLR -450 55 1 1896 103 7 11 chr10 119384140 119384411 -26204877 - AluSc SINE Alu 0 309 40 213 222 0 22 chr10 119384519 119384564 -26204724 + (CCTA)n Simple_repeat Simple_repeat 2 45 0 267 287 0 40 chr10 119385291 119385392 -26203896 + (CCTA)n Simple_repeat Simple_repeat 2 98 0 210 241 19 0 chr10 119385593 119385647 -26203641 + (ATG)n Simple_repeat Simple_repeat 1 55 0 278 205 72 0 chr10 119386564 119386647 -26202641 + MLT1J1 LTR MaLR 353 441 -5 1866 121 18 7 chr10 119387222 119387494 -26201794 - AluSc SINE Alu -11 298 24 31 44 0 0 chr10 119387739 119387784 -26201504 + AT_rich Low_complexity Low_complexity 1 45 0 207 114 0 0 chr10 119387804 119387839 -26201449 + (TA)n Simple_repeat Simple_repeat 2 36 0 232 217 0 0 chr10 119388079 119388125 -26201163 + LTR53 LTR ERVL 472 517 -2 223 287 85 32 chr10 119388236 119388330 -26200958 + MER5A DNA MER1_type 72 170 -8 397 240 41 94 chr10 119389163 119389334 -26199954 + MIR SINE MIR 4 165 -97 255 327 13 47 chr10 119389394 119389544 -26199744 + MLT1K LTR MaLR 126 270 -318 3030 158 16 8 chr10 119389863 119390249 -26199039 + MER41E LTR ERV1 1 393 -119 2273 132 0 0 chr10 119390249 119390559 -26198729 - AluSg SINE Alu 0 310 1 3030 158 16 8 chr10 119390559 119390680 -26198608 + MER41E LTR ERV1 393 512 0 193 260 154 48 chr10 119390771 119390875 -26198413 + MIR SINE MIR 147 261 -1 2105 131 44 19 chr10 119391108 119391474 -26197814 + THE1C LTR MaLR 1 375 0 418 197 17 0 chr10 119392281 119392398 -26196890 + (TA)n Simple_repeat Simple_repeat 2 120 0 449 261 11 72 chr10 119392407 119392587 -26196701 + MLT1J2 LTR MaLR 3 171 -279 291 157 102 0 chr10 119392732 119392808 -26196480 + MLT1J2 LTR MaLR 354 438 -8 285 282 82 9 chr10 119392935 119393045 -26196243 + MIR SINE MIR 78 195 -67 180 331 52 52 chr10 119393164 119393300 -26195988 + L2 LINE L2 3137 3272 0 21 0 0 0 chr10 119393572 119393593 -26195695 + AT_rich Low_complexity Low_complexity 1 21 0 24 77 0 0 chr10 119394712 119394764 -26194524 + AT_rich Low_complexity Low_complexity 1 52 0 2178 122 3 0 chr10 119395334 119395629 -26193659 + AluSg SINE Alu 1 296 -14 804 247 67 14 chr10 119395724 119395947 -26193341 + MIR SINE MIR 25 259 -3 532 263 55 55 chr10 119396097 119396314 -26192974 - L2 LINE L2 -9 3304 3088 2269 69 6 59 chr10 119397186 119397506 -26191782 + AluY SINE Alu 1 303 -8 228 263 0 66 chr10 119398440 119398516 -26190772 + MIR SINE MIR 72 142 -66 313 344 83 13 chr10 119398832 119398989 -26190299 - MER5B DNA MER1_type 0 178 11 276 292 9 53 chr10 119399117 119399230 -26190058 + MER77 LTR ERV1 79 186 -419 35 71 0 0 chr10 119399620 119399690 -26189598 + AT_rich Low_complexity Low_complexity 1 70 0 1613 196 0 48 chr10 119399691 119400003 -26189285 - AluJo SINE Alu -15 297 1 355 308 15 8 chr10 119400660 119400793 -26188495 - MIR SINE MIR -115 147 14 248 202 0 0 chr10 119401877 119401935 -26187353 - MIR SINE MIR -65 143 102 411 326 118 11 chr10 119402129 119402307 -26186981 - L3 LINE CR1 -26 1551 1355 597 274 70 33 chr10 119402422 119402663 -26186625 - REP3 LTR ERV -305 257 8 289 253 89 0 chr10 119402672 119402751 -26186537 + MIR3 SINE MIR 93 178 -30 2148 82 26 7 chr10 119403508 119403813 -26185475 - L1PA13 LINE L1 0 6163 5853 25 51 0 0 chr10 119404947 119404986 -26184302 + AT_rich Low_complexity Low_complexity 1 39 0 256 254 169 17 chr10 119405014 119405132 -26184156 + MIR SINE MIR 114 249 -13 578 306 64 18 chr10 119406180 119406399 -26182889 + MIR SINE MIR 32 260 -2 438 329 83 21 chr10 119406395 119406635 -26182653 - MIR SINE MIR -7 255 1 * 2283 114 0 11 chr10 119406724 119407092 -26182196 - L1P LINE L1 -3623 2523 2160 1883 89 76 0 chr10 119407094 119407397 -26181891 + L1P LINE L1 2516 2841 -3305 2673 23 3 0 chr10 119407397 119407699 -26181589 + AluY SINE Alu 1 303 -8 212 336 224 4 chr10 119407718 119407959 -26181329 - L3 LINE CR1 -61 1516 1223 196 256 70 105 chr10 119408456 119408628 -26180660 + MIR SINE MIR 66 231 -31 267 272 146 19 chr10 119409148 119409251 -26180037 + MIR SINE MIR 76 191 -71 180 111 0 0 chr10 119409251 119409278 -26180010 + (A)n Simple_repeat Simple_repeat 1 27 0 512 309 21 46 chr10 119409360 119409554 -26179734 + MIR SINE MIR 73 261 -1 2054 133 3 3 chr10 119409726 119410028 -26179260 + AluSx SINE Alu 1 302 -10 216 0 0 0 chr10 119410876 119410900 -26178388 + (T)n Simple_repeat Simple_repeat 1 24 0 349 329 40 40 chr10 119411287 119411542 -26177746 - L2 LINE L2 -256 3016 2764 680 216 0 41 chr10 119411554 119411725 -26177563 + L1MB5 LINE L1 6001 6164 -10 23 33 0 0 chr10 119411733 119411763 -26177525 + AT_rich Low_complexity Low_complexity 1 30 0 1230 167 0 14 chr10 119411763 119411978 -26177310 + AluSg SINE Alu 1 212 -98 746 276 44 51 chr10 119412122 119412535 -26176753 - MER92A LTR ERV1 0 412 3 2014 123 55 30 chr10 119413017 119413383 -26175905 - THE1C LTR MaLR 0 375 1 257 309 186 29 chr10 119413418 119413622 -26175666 - MIR SINE MIR -15 247 12 325 309 30 42 chr10 119414425 119414590 -26174698 - MIR SINE MIR -10 252 90 24 67 0 0 chr10 119414590 119414635 -26174653 + AT_rich Low_complexity Low_complexity 1 45 0 463 135 218 118 chr10 119414941 119415111 -26174177 + MER5A DNA MER1_type 1 187 -2 312 294 73 43 chr10 119416007 119416158 -26173130 + L2 LINE L2 2916 3069 -203 348 145 116 0 chr10 119416316 119416385 -26172903 - L1MDa LINE L1 -6450 90 14 461 103 0 69 chr10 119416541 119416628 -26172660 - MER3 DNA MER1_type 0 209 129 2069 138 10 0 chr10 119416629 119416927 -26172361 + AluSx SINE Alu 1 301 -11 2032 161 35 15 chr10 119417014 119417412 -26171876 + MSTA LTR MaLR 23 428 0 2267 311 78 9 chr10 119417459 119418362 -26170926 - HERV16 LTR ERVL -2367 2629 1665 319 340 91 14 chr10 119418749 119418958 -26170330 - L2 LINE L2 -2213 1101 877 1483 169 0 0 chr10 119419079 119419351 -26169937 + L1P LINE L1 4744 5015 -1131 2175 122 3 0 chr10 119419352 119419647 -26169641 + AluSg SINE Alu 1 296 -14 804 247 67 14 chr10 119419742 119419965 -26169323 + MIR SINE MIR 25 259 -3 532 263 55 55 chr10 119420115 119420332 -26168956 - L2 LINE L2 -9 3304 3088 468 299 86 18 chr10 119421447 119421785 -26167503 - L1ME4a LINE L1 -239 5882 5522 25 95 0 0 chr10 119421796 119421870 -26167418 + AT_rich Low_complexity Low_complexity 1 74 0 1914 171 0 7 chr10 119422858 119423167 -26166121 + AluSx SINE Alu 1 307 -5 933 298 105 28 chr10 119423199 119423665 -26165623 + L2 LINE L2 2812 3313 0 3995 172 83 8 chr10 119423738 119424506 -26164782 - LTR1B LTR ERV1 0 826 1 9662 96 23 11 chr10 119424866 119427092 -26162196 - L1PA7 LINE L1 -4 6150 3906 325 270 95 15 chr10 119428804 119428941 -26160347 + MIR SINE MIR 72 219 -43 1033 192 38 116 chr10 119429394 119429790 -26159498 - MLT1A1 LTR MaLR 0 365 1 448 150 23 120 chr10 119429993 119430126 -26159162 - MLT1B LTR MaLR -139 251 132 1075 236 25 16 chr10 119430126 119430510 -26158778 + MLT2D LTR ERVL 1 395 -69 230 339 33 16 chr10 119430741 119430862 -26158426 - MER5A DNA MER1_type -59 130 8 198 0 0 0 chr10 119431095 119431117 -26158171 + (TTTA)n Simple_repeat Simple_repeat 1 22 0 1459 193 23 30 chr10 119431736 119432041 -26157247 - AluJo SINE Alu -3 309 7 533 339 106 0 chr10 119432437 119432655 -26156633 + MIR SINE MIR 10 250 -12 232 264 64 79 chr10 119433014 119433154 -26156134 - MIR SINE MIR -6 256 119 190 56 56 0 chr10 119434283 119434319 -26154969 + (TTTG)n Simple_repeat Simple_repeat 3 40 0 24 0 0 0 chr10 119434358 119434382 -26154906 + AT_rich Low_complexity Low_complexity 1 24 0 2549 18 16 0 chr10 119435131 119435584 -26153704 - L1P1 LINE L1 -577 5578 5121 1783 35 0 0 chr10 119435600 119435826 -26153462 - L1P1 LINE L1 -1548 4598 4373 924 212 15 27 chr10 119435934 119436193 -26153095 - L1MB8 LINE L1 -2 6176 5921 351 241 28 19 chr10 119436200 119436308 -26152980 + MER89 LTR ERV1 3 111 -448 4236 59 17 0 chr10 119436315 119436856 -26152432 + L1PA6 LINE L1 5605 6154 0 1408 172 51 10 chr10 119436868 119437164 -26152124 + MER89 LTR ERV1 199 506 -53 1481 247 67 23 chr10 119437164 119437831 -26151457 - L1ME3A LINE L1 -260 5910 5195 5098 187 20 26 chr10 119437978 119439069 -26150219 + L1P LINE L1 11 1095 -5051 3366 61 18 0 chr10 119439353 119439795 -26149493 - L1PA13 LINE L1 -4 6159 5710 215 330 68 23 chr10 119439849 119439937 -26149351 + L2 LINE L2 3145 3236 -36 2332 96 7 0 chr10 119440459 119440761 -26148527 - AluSp SINE Alu -8 305 2 354 380 73 17 chr10 119442254 119442441 -26146847 + MIR3 SINE MIR 8 196 -12 436 292 73 0 chr10 119442711 119442848 -26146440 - MIR SINE MIR -45 217 71 206 122 0 61 chr10 119442903 119442952 -26146336 + (CAAAAA)n Simple_repeat Simple_repeat 6 51 0 2277 206 58 34 chr10 119444863 119445518 -26143770 + L1MC3 LINE L1 5752 6422 -1363 531 0 0 0 chr10 119446061 119446120 -26143168 + (TA)n Simple_repeat Simple_repeat 2 60 0 6116 93 18 26 chr10 119446126 119447292 -26141996 - L1PA12 LINE L1 0 6168 5018 2494 69 0 3 chr10 119447292 119447598 -26141690 - AluY SINE Alu -6 305 1 6116 93 18 26 chr10 119447598 119447871 -26141417 - L1PA12 LINE L1 -1150 5018 4744 364 356 82 0 chr10 119447992 119448200 -26141088 + L2 LINE L2 877 1101 -2213 1836 303 26 9 chr10 119448587 119449490 -26139798 + HERV16 LTR ERVL 1665 2629 -2367 2100 148 35 15 chr10 119449537 119449935 -26139353 - MSTA LTR MaLR 0 428 23 2211 124 7 0 chr10 119450022 119450321 -26138967 - AluSx SINE Alu -11 301 1 25 95 0 0 chr10 119451309 119451383 -26137905 + AT_rich Low_complexity Low_complexity 1 74 0 468 299 86 18 chr10 119451394 119451732 -26137556 + L1ME4a LINE L1 5522 5882 -239 4213 90 0 0 chr10 119452211 119452765 -26136523 - MER41A LTR ERV1 0 554 1 431 273 53 38 chr10 119454515 119454647 -26134641 + MIR3 SINE MIR 22 155 -53 210 353 29 29 chr10 119455036 119455138 -26134150 + MIR3 SINE MIR 58 159 -49 284 281 0 0 chr10 119455247 119455343 -26133945 - MER103 DNA DNA -67 99 4 225 65 0 0 chr10 119455648 119455679 -26133609 + (CA)n Simple_repeat Simple_repeat 2 32 0 2447 137 0 3 chr10 119456089 119456454 -26132834 - THE1B LTR MaLR 0 364 1 10602 110 12 29 chr10 119456454 119458062 -26131226 - THE1B-int LTR MaLR 0 1580 1 2525 132 3 0 chr10 119458062 119458425 -26130863 - THE1B LTR MaLR 0 364 1 309 284 45 45 chr10 119459022 119459156 -26130132 + L2 LINE L2 3134 3267 -5 2784 91 107 5 chr10 119459471 119459912 -26129376 + LTR19A LTR ERV1 1 486 0 488 356 35 3 chr10 119459967 119460279 -26129009 - L1ME3A LINE L1 -307 5863 5542 386 206 127 36 chr10 119461171 119461336 -26127952 - L1ME3A LINE L1 -16 6154 5975 275 376 27 13 chr10 119461376 119461525 -26127763 - MIR3 SINE MIR -54 154 4 387 192 0 0 chr10 119461738 119461816 -26127472 + CT-rich Low_complexity Low_complexity 1 78 0 280 335 24 54 chr10 119462136 119462303 -26126985 + MIR SINE MIR 3 164 -98 316 301 12 0 chr10 119462808 119462891 -26126397 + MIR SINE MIR 56 139 -123 241 319 29 0 chr10 119463561 119463630 -26125658 - L2 LINE L2 -59 3213 3143 189 320 52 0 chr10 119465406 119465503 -26123785 + L2 LINE L2 2552 2653 -661 4262 202 21 34 chr10 119465527 119466522 -26122766 - L1MB5 LINE L1 -8 6402 5396 2066 120 10 3 chr10 119466522 119466814 -26122474 - AluSg SINE Alu -16 294 1 4262 202 21 34 chr10 119466814 119466844 -26122444 - L1MB5 LINE L1 -1014 5396 5367 1465 211 16 29 chr10 119466844 119467156 -26122132 - AluJo SINE Alu -4 308 1 4262 202 21 34 chr10 119467156 119467693 -26121595 - L1MB5 LINE L1 -1043 5367 4866 408 183 0 0 chr10 119467694 119467765 -26121523 + L1PA15-16 LINE L1 108 178 -6671 1936 231 43 19 chr10 119467770 119468414 -26120874 - L1MB5 LINE L1 -3339 3043 2384 1465 138 27 8 chr10 119468447 119468708 -26120580 - L1PB1 LINE L1 -8 6143 5878 735 217 38 33 chr10 119468708 119468948 -26120340 - L1MB5 LINE L1 -4881 1503 1263 197 95 0 24 chr10 119469026 119469068 -26120220 + (GA)n Simple_repeat Simple_repeat 1 41 0 180 0 0 0 chr10 119469073 119469093 -26120195 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 5367 125 39 2 chr10 119469093 119470265 -26119023 - L1PA15 LINE L1 -11 6154 4947 339 344 66 58 chr10 119470292 119470685 -26118603 + L2 LINE L2 2918 3313 0 934 283 113 31 chr10 119471010 119471523 -26117765 + LTR67 LTR ERVL 3 557 0 732 219 91 0 chr10 119471548 119471735 -26117553 + MER58A DNA MER1_type 20 223 -1 225 337 175 45 chr10 119472044 119472092 -26117196 - L3 LINE CR1 -6 1571 1531 2700 17 3 0 chr10 119472092 119472394 -26116894 + AluY SINE Alu 1 303 -8 225 337 175 45 chr10 119472394 119472654 -26116634 - L3 LINE CR1 -46 1531 1223 196 256 70 105 chr10 119473151 119473323 -26115965 + MIR SINE MIR 66 231 -31 287 262 146 19 chr10 119473843 119473946 -26115342 + MIR SINE MIR 76 191 -71 180 111 0 0 chr10 119473946 119473973 -26115315 + (A)n Simple_repeat Simple_repeat 1 27 0 570 294 21 46 chr10 119474055 119474249 -26115039 + MIR SINE MIR 73 261 -1 2054 133 3 3 chr10 119474421 119474723 -26114565 + AluSx SINE Alu 1 302 -10 225 0 0 0 chr10 119475570 119475595 -26113693 + (T)n Simple_repeat Simple_repeat 1 25 0 345 330 40 40 chr10 119475982 119476237 -26113051 - L2 LINE L2 -256 3016 2764 680 216 0 41 chr10 119476249 119476420 -26112868 + L1MB5 LINE L1 6001 6164 -10 30 21 0 21 chr10 119476428 119476458 -26112830 + AT_rich Low_complexity Low_complexity 1 31 -16 1989 125 7 7 chr10 119476458 119476745 -26112543 + AluSq SINE Alu 1 287 -26 30 21 0 21 chr10 119476745 119476762 -26112526 + AT_rich Low_complexity Low_complexity 31 47 0 1739 131 26 16 chr10 119476921 119477226 -26112062 - Tigger3(Golem) DNA MER2_type -1 3028 2721 349 200 67 0 chr10 119477224 119477299 -26111989 - Tigger3(Golem) DNA MER2_type -2947 82 3 * 267 133 0 0 chr10 119477319 119477364 -26111924 + (TA)n Simple_repeat Simple_repeat 1 45 0 331 293 147 5 chr10 119477406 119477604 -26111684 - L1MC4a LINE L1 -1876 5932 5707 337 239 69 54 chr10 119477890 119478020 -26111268 - HAL1b LINE L1 -488 860 729 482 289 58 40 chr10 119478125 119478450 -26110838 - HAL1b LINE L1 -752 596 266 1467 209 39 0 chr10 119478573 119478856 -26110432 - AluJo SINE Alu -16 296 3 22 0 0 0 chr10 119479107 119479129 -26110159 + AT_rich Low_complexity Low_complexity 1 22 0 496 176 19 0 chr10 119479891 119479999 -26109289 - L1MA10 LINE L1 -8 6326 6217 2073 235 62 43 chr10 119479898 119481156 -26108132 - L1ME1 LINE L1 -6 6229 4950 370 223 19 29 chr10 119481199 119481302 -26107986 - L1ME1 LINE L1 -6259 137 36 257 310 69 0 chr10 119481357 119481444 -26107844 - MIR SINE MIR -104 158 66 22 0 0 0 chr10 119481533 119481555 -26107733 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr10 119481862 119481885 -26107403 + AT_rich Low_complexity Low_complexity 1 23 0 987 164 0 0 chr10 119482346 119482524 -26106764 - AluSg/x SINE Alu 0 308 131 280 322 133 44 chr10 119482558 119483124 -26106164 + L2 LINE L2 1734 2349 -965 322 327 85 88 chr10 119483236 119483658 -26105630 + L2 LINE L2 2804 3224 -48 603 276 46 11 chr10 119484361 119484535 -26104753 - MER45C DNA AcHobo -773 180 1 2090 157 37 3 chr10 119486032 119486409 -26102879 - MLT1B LTR MaLR 0 390 1 201 388 0 0 chr10 119487178 119487245 -26102043 + L2 LINE L2 3137 3203 -69 2780 7 0 3 chr10 119487393 119487700 -26101588 - AluYa5 SINE Alu -5 306 1 2234 117 0 10 chr10 119488048 119488357 -26100931 - AluSq SINE Alu -7 306 1 869 203 48 5 chr10 119488525 119488712 -26100576 + MER58A DNA MER1_type 24 218 -6 347 332 59 79 chr10 119488745 119488864 -26100424 + L2 LINE L2 2370 2490 -824 715 147 22 7 chr10 119488864 119489000 -26100288 - L1MB1 LINE L1 0 6168 6031 347 332 59 79 chr10 119489000 119489287 -26100001 + L2 LINE L2 2490 2768 -546 2178 97 54 31 chr10 119489328 119489679 -26099609 + THE1B LTR MaLR 6 364 0 11326 97 21 1 chr10 119489680 119491227 -26098061 + THE1B-int LTR MaLR 2 1580 0 2198 115 72 23 chr10 119491227 119491574 -26097714 + THE1B LTR MaLR 1 364 0 212 294 9 64 chr10 119491759 119491868 -26097420 + MIR SINE MIR 124 226 -36 1663 177 72 0 chr10 119491942 119492219 -26097069 + AluJb SINE Alu 2 298 -14 239 339 92 9 chr10 119492395 119492504 -26096784 + L2 LINE L2 3138 3255 -17 312 27 0 0 chr10 119494079 119494116 -26095172 + (GA)n Simple_repeat Simple_repeat 2 38 0 21 36 0 0 chr10 119494284 119494312 -26094976 + AT_rich Low_complexity Low_complexity 1 28 0 767 279 222 11 chr10 119494326 119494777 -26094511 + LTR50 LTR ERVL 12 557 -238 233 254 162 14 chr10 119494897 119495039 -26094249 + LTR50 LTR ERVL 632 794 -1 539 315 14 22 chr10 119495443 119495665 -26093623 + MLT1K LTR MaLR 207 426 -162 1663 143 78 13 chr10 119496104 119496625 -26092663 - MER51A LTR ERV1 -9 625 1 2312 147 5 3 chr10 119496627 119497014 -26092274 - MER51A-int LTR ERV1 -1 7815 7428 575 138 21 0 chr10 119497015 119497109 -26092179 - LTR54B LTR ERV1 -400 98 3 2305 110 3 0 chr10 119497109 119497437 -26091851 - MER51A-int LTR ERV1 -389 7148 6820 1574 81 69 29 chr10 119497435 119497681 -26091607 - MER51-int LTR ERV1 -7559 257 2 * 2852 199 26 3 chr10 119497881 119498488 -26090800 + MER67C LTR ERV1 1 621 -89 4788 187 29 5 chr10 119498711 119499772 -26089516 + L1MA4A LINE L1 3972 5058 -1088 2123 175 66 120 chr10 119499791 119500532 -26088756 + LTR8A LTR ERV1 27 727 0 1797 110 9 57 chr10 119500534 119501043 -26088245 + L1MA4A LINE L1 5068 5563 -740 1452 102 133 31 chr10 119501043 119501336 -26087952 - LTR23 LTR ERV1 -112 325 3 2070 110 37 21 chr10 119501338 119501662 -26087626 + L1MA4A LINE L1 5648 5980 -323 4913 96 33 13 chr10 119501662 119502413 -26086875 - MER4E LTR ERV1 0 766 1 2070 110 37 21 chr10 119502413 119502469 -26086819 + L1MA4A LINE L1 5980 6034 -269 3458 75 10 4 chr10 119502469 119502959 -26086329 - LTR6B LTR ERV1 0 558 66 1552 118 4 4 chr10 119502982 119503244 -26086044 + L1MA4A LINE L1 6031 6292 -11 25 0 0 0 chr10 119503994 119504019 -26085269 + AT_rich Low_complexity Low_complexity 1 25 0 1426 153 44 51 chr10 119504395 119504690 -26084598 - MER4A LTR ERV1 0 664 372 249 89 22 22 chr10 119504738 119504783 -26084505 - MER4A LTR ERV1 -566 98 54 260 265 42 66 chr10 119505014 119505180 -26084108 + HAL1 LINE L1 2237 2398 -109 374 339 0 0 chr10 119505752 119505864 -26083424 - L3 LINE CR1 -119 1458 1347 1362 258 73 45 chr10 119505911 119506224 -26083064 + L1ME3A LINE L1 4795 5098 -1072 2413 90 3 0 chr10 119506224 119506535 -26082753 + AluSq SINE Alu 1 312 -1 1362 258 73 45 chr10 119506535 119507380 -26081908 + L1ME3A LINE L1 5098 5986 -184 2719 50 17 102 chr10 119507414 119507875 -26081413 - MLT2A1 LTR ERVL -22 422 1 17324 69 34 1 chr10 119507875 119510223 -26079065 - HERVL-A1 LTR ERVL 0 5654 3230 265 289 36 0 chr10 119510562 119510645 -26078643 + MIR SINE MIR 63 148 -60 293 247 0 25 chr10 119511219 119511300 -26077988 + MLT1L LTR MaLR 1 79 -536 2279 149 70 12 chr10 119512156 119512558 -26076730 - MSTB LTR MaLR -1 425 1 374 0 22 0 chr10 119512808 119512854 -26076434 + (CA)n Simple_repeat Simple_repeat 2 48 0 267 349 12 12 chr10 119513835 119513918 -26075370 + MIR SINE MIR 25 107 -155 2571 3 0 0 chr10 119513938 119514237 -26075051 - L1HS LINE L1 0 6155 5857 237 139 0 0 chr10 119514792 119514835 -26074453 + (T)n Simple_repeat Simple_repeat 1 43 0 261 217 57 28 chr10 119514943 119515049 -26074239 - L1ME4a LINE L1 -12 6109 6001 3354 204 72 24 chr10 119515150 119516012 -26073276 - L1MD1 LINE L1 -1 6635 5733 * 8029 198 106 60 chr10 119516000 119516544 -26072744 - L1MD1 LINE L1 -3894 2646 2128 422 36 18 0 chr10 119516544 119516600 -26072688 + (TA)n Simple_repeat Simple_repeat 1 57 0 8029 198 106 60 chr10 119516600 119518675 -26070613 - L1MD1 LINE L1 -4412 2128 16 582 235 26 26 chr10 119520637 119520790 -26068498 + MIR SINE MIR 5 157 -105 442 300 11 20 chr10 119520801 119520976 -26068312 - MLT2E LTR ERVL -454 174 1 3341 225 36 10 chr10 119521188 119522000 -26067288 + HERVL74 LTR ERVL 1251 2083 -3602 330 26 0 0 chr10 119522799 119522838 -26066450 + (CA)n Simple_repeat Simple_repeat 2 40 0 366 355 0 0 chr10 119523797 119523918 -26065370 - L2 LINE L2 -24 3289 3169 1993 97 13 44 chr10 119524009 119524307 -26064981 - AluSc SINE Alu -20 289 1 30 0 0 0 chr10 119524431 119524461 -26064827 + AT_rich Low_complexity Low_complexity 1 30 0 495 335 40 24 chr10 119524558 119524809 -26064479 - MIR SINE MIR -2 260 6 291 239 92 106 chr10 119525439 119525581 -26063707 + MIR SINE MIR 59 198 -64 24 53 0 0 chr10 119526016 119526054 -26063234 + AT_rich Low_complexity Low_complexity 1 38 0 1045 160 46 21 chr10 119526260 119526486 -26062802 - L1MA6 LINE L1 -126 6174 5940 732 105 38 8 chr10 119526486 119526615 -26062673 + L1MA6 LINE L1 6162 6298 -2 1045 160 46 21 chr10 119526615 119526626 -26062662 - L1MA6 LINE L1 -360 5940 5931 585 244 17 0 chr10 119526747 119526927 -26062361 + MER53 DNA DNA 5 187 -2 185 0 40 0 chr10 119527557 119527582 -26061706 + (TAA)n Simple_repeat Simple_repeat 2 27 0 2148 82 31 14 chr10 119527598 119527890 -26061398 - AluY SINE Alu -14 297 1 1113 99 7 0 chr10 119528573 119528725 -26060563 - AluSp/q SINE Alu -4 309 157 378 352 34 11 chr10 119529672 119529848 -26059440 - MIR SINE MIR -76 186 7 1579 295 74 38 chr10 119530038 119531595 -26057693 + L1ME LINE L1 20 1667 -4594 12862 76 4 1 chr10 119531601 119533428 -26055860 - L1P LINE L1 -756 5398 3560 9677 152 11 28 chr10 119533419 119535220 -26054068 - L1P LINE L1 -4365 1781 11 * 491 340 92 35 chr10 119536014 119536737 -26052551 - L2 LINE L2 -222 3050 2281 1394 220 2 68 chr10 119537251 119537651 -26051637 + MLT1A2 LTR MaLR 1 374 0 2903 85 8 2 chr10 119538139 119538539 -26050749 + L1PA8 LINE L1 5771 6172 0 2083 149 10 0 chr10 119540129 119540479 -26048809 - AluSx SINE Alu 0 353 1 467 319 97 9 chr10 119540775 119541001 -26048287 - MIR SINE MIR -14 248 3 396 271 33 0 chr10 119541462 119541584 -26047704 - LTR16C LTR ERVL 0 491 366 2320 89 0 0 chr10 119541945 119542238 -26047050 - AluY SINE Alu -17 294 2 2546 103 24 22 chr10 119542329 119542738 -26046550 - L1MA1 LINE L1 -9 6293 5884 280 322 186 11 chr10 119542961 119543144 -26046144 + MIR SINE MIR 7 221 -41 433 255 18 13 chr10 119543696 119543860 -26045428 - L1ME1 LINE L1 -5 6161 5987 1396 229 145 35 chr10 119543892 119545005 -26044283 - L1ME1 LINE L1 -239 5927 4696 7246 199 31 21 chr10 119545178 119548093 -26041195 - L1PA16 LINE L1 -2 6164 3223 1756 197 63 7 chr10 119548095 119548556 -26040732 - L1MA5 LINE L1 0 6300 5814 * 9345 202 12 33 chr10 119548547 119549137 -26040151 - L1PA16 LINE L1 0 6166 5565 2024 119 24 10 chr10 119549137 119549432 -26039856 + AluY SINE Alu 1 299 -12 9345 202 12 33 chr10 119549432 119552426 -26036862 - L1PA16 LINE L1 -601 5565 2643 557 275 59 3 chr10 119552508 119552795 -26036493 - L1MEc LINE L1 -5352 1044 742 1766 156 10 24 chr10 119552809 119553097 -26036191 + AluJo SINE Alu 3 286 -26 233 146 21 0 chr10 119553097 119553145 -26036143 + (TA)n Simple_repeat Simple_repeat 2 50 0 31 76 0 0 chr10 119553168 119553234 -26036054 + AT_rich Low_complexity Low_complexity 1 66 0 234 189 19 0 chr10 119554858 119554936 -26034352 + CT-rich Low_complexity Low_complexity 1 79 0 26 30 0 0 chr10 119556465 119556498 -26032790 + AT_rich Low_complexity Low_complexity 1 33 0 23 0 0 0 chr10 119556903 119556926 -26032362 + AT_rich Low_complexity Low_complexity 1 23 0 270 81 0 0 chr10 119556954 119556991 -26032297 + (TATATG)n Simple_repeat Simple_repeat 4 40 0 196 128 13 51 chr10 119557386 119557464 -26031824 + (TATAA)n Simple_repeat Simple_repeat 2 76 0 623 257 55 11 chr10 119557793 119557976 -26031312 - MIR SINE MIR -63 199 9 209 281 236 0 chr10 119558427 119558516 -26030772 - MER91A DNA MER1_type 0 196 87 255 331 204 14 chr10 119558517 119558659 -26030629 - MER91A DNA MER1_type -25 171 3 274 220 16 141 chr10 119559113 119559304 -26029984 + L1MB7 LINE L1 6018 6184 0 195 371 29 43 chr10 119559440 119559580 -26029708 - L2 LINE L2 -9 3263 3126 4357 147 3 74 chr10 119559584 119559904 -26029384 - L1P LINE L1 -1907 4239 3898 2536 60 0 19 chr10 119559904 119560221 -26029067 - AluY SINE Alu 0 311 1 1719 178 11 3 chr10 119560224 119560510 -26028778 - AluJb SINE Alu -20 292 5 4357 147 3 74 chr10 119560510 119561122 -26028166 - L1P LINE L1 -2250 3896 3369 * 5368 167 12 2 chr10 119561117 119562715 -26026573 + L1PA13 LINE L1 4220 5830 -331 37959 71 8 7 chr10 119562715 119568862 -26020426 + L1PA5 LINE L1 2 6154 0 1995 142 0 0 chr10 119568857 119569187 -26020101 + L1PA13 LINE L1 5814 6143 -20 * 276 244 24 24 chr10 119569623 119569705 -26019583 - MIR SINE MIR -122 140 59 2137 154 19 0 chr10 119570008 119570378 -26018910 + Tigger2 DNA MER2_type 2342 2718 0 248 145 0 92 chr10 119571064 119571140 -26018148 + (TTA)n Simple_repeat Simple_repeat 2 70 0 529 307 105 22 chr10 119572202 119572430 -26016858 - MIR SINE MIR -1 261 15 189 244 171 89 chr10 119572615 119572738 -26016550 - MIR SINE MIR -98 164 32 697 263 116 0 chr10 119573830 119574020 -26015268 + MIR SINE MIR 51 262 0 285 98 0 0 chr10 119575048 119575089 -26014199 + (TCC)n Simple_repeat Simple_repeat 1 41 0 2367 75 0 28 chr10 119575434 119575753 -26013535 + AluY SINE Alu 1 310 -1 1343 233 111 9 chr10 119575844 119576310 -26012978 - L1MC4a LINE L1 -802 7006 6500 213 267 89 44 chr10 119576311 119576401 -26012887 + MIR SINE MIR 95 188 -74 189 74 0 0 chr10 119577703 119577730 -26011558 + (CAAAAA)n Simple_repeat Simple_repeat 4 30 0 288 322 168 0 chr10 119578187 119578330 -26010958 + MIR SINE MIR 53 219 -43 1585 114 14 79 chr10 119578477 119578837 -26010451 + MER4A LTR ERV1 270 664 0 2514 119 29 43 chr10 119579029 119579294 -26009994 + MER4E LTR ERV1 1 268 -498 2366 110 0 3 chr10 119579294 119579602 -26009686 - AluSg1 SINE Alu -2 307 1 2514 119 29 43 chr10 119579602 119579943 -26009345 + MER4E LTR ERV1 268 766 0 367 333 40 7 chr10 119580194 119580344 -26008944 + MIR SINE MIR 92 246 -16 1740 135 3 0 chr10 119580505 119580802 -26008486 + L1MA4 LINE L1 5999 6296 -4 22 35 0 0 chr10 119580894 119580923 -26008365 + AT_rich Low_complexity Low_complexity 1 29 0 766 137 14 0 chr10 119582078 119582224 -26007064 + GA-rich Low_complexity Low_complexity 3 150 0 1989 215 105 30 chr10 119582935 119583440 -26005848 + MER50 LTR ERV1 10 580 -154 2509 69 0 0 chr10 119583440 119583746 -26005542 - AluY SINE Alu -5 306 1 1989 215 105 30 chr10 119583746 119583914 -26005374 + MER50 LTR ERV1 580 734 0 240 187 11 22 chr10 119584136 119584227 -26005061 + GA-rich Low_complexity Low_complexity 3 92 0 409 241 56 15 chr10 119584377 119584572 -26004716 - HAL1b LINE L1 -155 1193 991 523 200 152 0 chr10 119586006 119586131 -26003157 - MIR SINE MIR -91 171 28 329 164 30 15 chr10 119586611 119586678 -26002610 + MIR SINE MIR 77 144 -118 2592 145 37 2 chr10 119586730 119587137 -26002151 - MSTB LTR MaLR -4 422 2 189 341 30 22 chr10 119587417 119587552 -26001736 - MER5A DNA MER1_type -53 136 1 746 196 51 0 chr10 119588130 119588268 -26001020 + FRAM SINE Alu 4 148 -18 24354 139 9 14 chr10 119588637 119594775 -25994513 + L1PA8A LINE L1 2 6167 -279 463 122 95 0 chr10 119594775 119594849 -25994439 + AluSg/x SINE Alu 214 294 -16 28 0 0 0 chr10 119595848 119595876 -25993412 + AT_rich Low_complexity Low_complexity 1 28 0 565 335 30 0 chr10 119596423 119596620 -25992668 + MIR SINE MIR 55 257 -5 1276 205 123 36 chr10 119597434 119597882 -25991406 + L1MB7 LINE L1 5698 6184 0 959 149 0 7 chr10 119599761 119599915 -25989373 + MLT2A1 LTR ERVL 223 375 -69 26 0 0 0 chr10 119599956 119599982 -25989306 + AT_rich Low_complexity Low_complexity 1 26 0 241 319 29 0 chr10 119601761 119601830 -25987458 + L2 LINE L2 3143 3213 -59 275 325 12 0 chr10 119602500 119602583 -25986705 - MIR SINE MIR -123 139 56 235 353 26 52 chr10 119603104 119603257 -25986031 - MIR SINE MIR -111 151 3 378 214 0 0 chr10 119603577 119603661 -25985627 + GA-rich Low_complexity Low_complexity 1 84 0 275 376 27 13 chr10 119603874 119604023 -25985265 + MIR3 SINE MIR 4 154 -54 386 206 127 36 chr10 119604063 119604228 -25985060 + L1ME3A LINE L1 5975 6154 -16 528 355 16 3 chr10 119605120 119605438 -25983850 + L1ME3A LINE L1 5542 5863 -307 2817 86 107 5 chr10 119605493 119605934 -25983354 - LTR19A LTR ERV1 0 486 1 285 284 45 45 chr10 119606249 119606383 -25982905 - L2 LINE L2 -5 3267 3134 2240 141 28 22 chr10 119606980 119607342 -25981946 + THE1B LTR MaLR 1 364 0 212 294 9 64 chr10 119607527 119607636 -25981652 + MIR SINE MIR 124 226 -36 1536 194 72 4 chr10 119607710 119607988 -25981300 + AluJb SINE Alu 2 298 -14 239 339 92 9 chr10 119608164 119608273 -25981015 + L2 LINE L2 3138 3255 -17 312 27 0 0 chr10 119609848 119609885 -25979403 + (GA)n Simple_repeat Simple_repeat 2 38 0 21 36 0 0 chr10 119610053 119610081 -25979207 + AT_rich Low_complexity Low_complexity 1 28 0 767 279 222 11 chr10 119610095 119610546 -25978742 + LTR50 LTR ERVL 12 557 -238 233 254 162 14 chr10 119610666 119610808 -25978480 + LTR50 LTR ERVL 632 794 -1 469 329 14 22 chr10 119611212 119611434 -25977854 + MLT1K LTR MaLR 207 426 -162 1663 143 78 13 chr10 119611873 119612394 -25976894 - MER51A LTR ERV1 -9 625 1 2312 147 5 3 chr10 119612396 119612783 -25976505 - MER51A-int LTR ERV1 -1 7815 7428 575 138 21 0 chr10 119612784 119612878 -25976410 - LTR54B LTR ERV1 -400 98 3 2305 110 3 0 chr10 119612878 119613206 -25976082 - MER51A-int LTR ERV1 -389 7148 6820 1574 81 69 29 chr10 119613204 119613450 -25975838 - MER51-int LTR ERV1 -7559 257 2 * 2852 199 26 3 chr10 119613650 119614257 -25975031 + MER67C LTR ERV1 1 621 -89 4805 186 29 5 chr10 119614480 119615541 -25973747 + L1MA4A LINE L1 3972 5058 -1088 2123 175 66 120 chr10 119615560 119616301 -25972987 + LTR8A LTR ERV1 27 727 0 1797 110 9 57 chr10 119616303 119616812 -25972476 + L1MA4A LINE L1 5068 5563 -740 1452 102 133 31 chr10 119616812 119617105 -25972183 - LTR23 LTR ERV1 -112 325 3 2086 108 37 21 chr10 119617107 119617431 -25971857 + L1MA4A LINE L1 5648 5980 -323 4939 101 28 8 chr10 119617431 119618182 -25971106 - MER4E LTR ERV1 0 766 1 2086 108 37 21 chr10 119618182 119618238 -25971050 + L1MA4A LINE L1 5980 6034 -269 3458 75 10 4 chr10 119618238 119618728 -25970560 - LTR6B LTR ERV1 0 558 66 1552 118 4 4 chr10 119618751 119619013 -25970275 + L1MA4A LINE L1 6031 6292 -11 3366 61 18 0 chr10 119620117 119620559 -25968729 - L1PA13 LINE L1 -4 6159 5710 215 330 68 23 chr10 119620613 119620701 -25968587 + L2 LINE L2 3145 3236 -36 2324 96 7 0 chr10 119621223 119621524 -25967764 - AluSp SINE Alu -9 304 2 366 373 48 10 chr10 119623020 119623207 -25966081 + MIR3 SINE MIR 8 196 -12 460 285 73 0 chr10 119623477 119623614 -25965674 - MIR SINE MIR -45 217 71 206 122 0 61 chr10 119623669 119623718 -25965570 + (CAAAAA)n Simple_repeat Simple_repeat 6 51 0 2317 203 58 32 chr10 119625633 119626287 -25963001 + L1MC3 LINE L1 5752 6422 -1363 297 0 0 0 chr10 119626825 119626858 -25962430 + (TA)n Simple_repeat Simple_repeat 2 34 0 6014 97 18 26 chr10 119626863 119628029 -25961259 - L1PA12 LINE L1 0 6168 5018 2458 75 0 3 chr10 119628029 119628335 -25960953 - AluY SINE Alu -6 305 1 6014 97 18 26 chr10 119628335 119628608 -25960680 - L1PA12 LINE L1 -1150 5018 4744 364 356 82 0 chr10 119628729 119628937 -25960351 + L2 LINE L2 877 1101 -2213 1861 300 26 9 chr10 119629324 119630227 -25959061 + HERV16 LTR ERVL 1665 2629 -2367 2077 151 35 15 chr10 119630274 119630672 -25958616 - MSTA LTR MaLR 0 428 23 2206 129 7 0 chr10 119630759 119631061 -25958227 - AluSx SINE Alu -8 304 1 32 81 0 0 chr10 119632049 119632123 -25957165 + AT_rich Low_complexity Low_complexity 1 74 0 565 296 86 18 chr10 119632134 119632472 -25956816 + L1ME4a LINE L1 5522 5882 -239 4202 90 0 0 chr10 119632951 119633505 -25955783 - MER41A LTR ERV1 0 554 1 428 273 53 38 chr10 119635255 119635387 -25953901 + MIR3 SINE MIR 22 155 -53 203 308 29 77 chr10 119635765 119635869 -25953419 + MIR SINE MIR 57 156 -52 312 319 21 0 chr10 119635931 119636072 -25953216 - MER103 DNA DNA -19 147 4 225 65 0 0 chr10 119636377 119636408 -25952880 + (CA)n Simple_repeat Simple_repeat 2 32 0 2459 137 0 3 chr10 119636818 119637183 -25952105 - THE1B LTR MaLR 0 364 1 3154 109 2 9 chr10 119637183 119637640 -25951648 - THE1B-int LTR MaLR 0 1580 1127 23 0 0 0 chr10 119638285 119638308 -25950980 + AT_rich Low_complexity Low_complexity 1 23 0 524 235 40 7 chr10 119638646 119638795 -25950493 - Charlie7 DNA MER1_type -1447 1165 1012 528 157 113 0 chr10 119638795 119638910 -25950378 - L1MA9 LINE L1 -5 6307 6180 974 186 25 63 chr10 119638915 119639152 -25950136 - L1MA9 LINE L1 -194 6118 5891 251 213 0 0 chr10 119641496 119641543 -25947745 + MER4-int LTR ERV1 1110 1156 -5442 572 327 27 5 chr10 119641693 119641913 -25947375 + MIR SINE MIR 2 226 -36 212 304 25 13 chr10 119642180 119642259 -25947029 - L2 LINE L2 0 3272 3193 230 175 0 18 chr10 119645928 119645985 -25943303 + CT-rich Low_complexity Low_complexity 1 56 0 409 310 76 0 chr10 119646900 119647071 -25942217 + MIR SINE MIR 31 214 -48 536 320 66 0 chr10 119647966 119648163 -25941125 + MIR SINE MIR 53 262 0 2553 49 7 3 chr10 119648476 119648784 -25940504 - AluY SINE Alu -2 309 1 22 0 0 0 chr10 119648826 119648848 -25940440 + AT_rich Low_complexity Low_complexity 1 22 0 2148 112 13 10 chr10 119649554 119649866 -25939422 + AluSq SINE Alu 1 313 0 1517 210 66 18 chr10 119650172 119650506 -25938782 + MLT1A2 LTR MaLR 21 370 -4 808 103 63 0 chr10 119650621 119650747 -25938541 + MER85 DNA T2_type 2 135 -4 25 51 0 0 chr10 119652703 119652742 -25936546 + AT_rich Low_complexity Low_complexity 1 39 0 500 286 45 60 chr10 119653336 119653668 -25935620 - L1MEc LINE L1 -1471 4744 4418 1008 291 69 0 chr10 119653794 119654183 -25935105 - L1MEc LINE L1 -1818 4397 3982 682 254 92 4 chr10 119654176 119654554 -25934734 - L1MEc LINE L1 -3737 2478 2111 * 6475 31 1 0 chr10 119654619 119655493 -25933795 - L1PA3 LINE L1 -668 5487 4613 5751 24 0 0 chr10 119655493 119656153 -25933135 + L1PA3 LINE L1 5492 6155 0 878 266 25 8 chr10 119656216 119656453 -25932835 + L1MC4 LINE L1 6769 7009 -1033 1635 167 3 39 chr10 119656923 119657229 -25932059 + AluJo SINE Alu 5 299 -13 584 340 20 5 chr10 119659844 119660047 -25929241 - MIR SINE MIR 0 262 57 241 240 64 160 chr10 119660111 119660423 -25928865 + LTR16A1 LTR ERVL 1 282 -175 22 0 0 0 chr10 119660750 119660772 -25928516 + AT_rich Low_complexity Low_complexity 1 22 0 183 129 0 0 chr10 119660791 119660822 -25928466 + (T)n Simple_repeat Simple_repeat 1 31 0 6737 231 35 30 chr10 119661047 119662226 -25927062 - L1MB8 LINE L1 0 6178 5006 3985 161 14 11 chr10 119662226 119662928 -25926360 - L1PA16 LINE L1 0 6166 5463 6737 231 35 30 chr10 119662928 119664837 -25924451 - L1MB8 LINE L1 -1172 5006 3090 259 330 75 11 chr10 119665422 119665516 -25923772 + MER5B DNA MER1_type 1 100 -78 472 319 97 9 chr10 119666644 119666870 -25922418 + MIR SINE MIR 3 248 -14 1952 141 0 0 chr10 119667166 119667442 -25921846 + AluSx SINE Alu 1 276 -36 220 308 64 0 chr10 119668547 119668625 -25920663 - MIR SINE MIR -102 160 78 1333 218 101 3 chr10 119668749 119669075 -25920213 + L1MC4 LINE L1 6730 7087 -955 2352 75 0 28 chr10 119669167 119669486 -25919802 - AluY SINE Alu -1 310 1 285 98 0 0 chr10 119669831 119669872 -25919416 + (GGA)n Simple_repeat Simple_repeat 1 41 0 339 25 0 0 chr10 119770032 119770072 -25819216 + (GGGA)n Simple_repeat Simple_repeat 3 42 0 2258 215 105 30 chr10 119770783 119771288 -25818000 + MER50 LTR ERV1 10 580 -154 2523 69 0 0 chr10 119771288 119771594 -25817694 - AluY SINE Alu -5 306 1 2258 215 105 30 chr10 119771594 119771762 -25817526 + MER50 LTR ERV1 580 734 0 240 187 11 22 chr10 119771984 119772075 -25817213 + GA-rich Low_complexity Low_complexity 3 92 0 497 241 56 15 chr10 119772225 119772420 -25816868 - HAL1b LINE L1 -155 1193 991 518 200 152 0 chr10 119773854 119773979 -25815309 - MIR SINE MIR -91 171 28 332 164 30 15 chr10 119774459 119774526 -25814762 + MIR SINE MIR 77 144 -118 2782 145 37 2 chr10 119774578 119774985 -25814303 - MSTB LTR MaLR -4 422 2 182 341 30 22 chr10 119775264 119775399 -25813889 - MER5A DNA MER1_type -53 136 1 809 201 43 0 chr10 119775977 119776116 -25813172 + FRAM SINE Alu 4 148 -18 26510 138 9 14 chr10 119776485 119782623 -25806665 + L1PA8A LINE L1 2 6167 -279 497 95 108 0 chr10 119782623 119782697 -25806591 + AluSp/q SINE Alu 216 297 -16 28 0 0 0 chr10 119783696 119783724 -25805564 + AT_rich Low_complexity Low_complexity 1 28 0 558 335 30 0 chr10 119784271 119784468 -25804820 + MIR SINE MIR 55 257 -5 1403 205 123 36 chr10 119785281 119785729 -25803559 + L1MB7 LINE L1 5698 6184 0 259 330 75 11 chr10 119788280 119788374 -25800914 - MER5B DNA MER1_type -78 100 1 6900 230 34 30 chr10 119788959 119790870 -25798418 + L1MB8 LINE L1 3090 5005 -1173 3940 162 14 13 chr10 119790870 119791573 -25797715 + L1PA16 LINE L1 5463 6166 0 6900 230 34 30 chr10 119791573 119792752 -25796536 + L1MB8 LINE L1 5005 6178 0 183 129 0 0 chr10 119792977 119793008 -25796280 + (A)n Simple_repeat Simple_repeat 1 31 0 22 0 0 0 chr10 119793027 119793049 -25796239 + AT_rich Low_complexity Low_complexity 1 22 0 241 240 64 160 chr10 119793376 119793688 -25795600 - LTR16A1 LTR ERVL -175 282 1 584 340 20 5 chr10 119793752 119793955 -25795333 + MIR SINE MIR 57 262 0 1635 167 3 39 chr10 119796570 119796876 -25792412 - AluJo SINE Alu -13 299 5 878 266 25 8 chr10 119797346 119797583 -25791705 - L1MC4 LINE L1 -1033 7009 6769 5751 24 0 0 chr10 119797646 119798310 -25790978 - L1PA3 LINE L1 0 6155 5492 6461 30 1 0 chr10 119798310 119799180 -25790108 + L1PA3 LINE L1 4617 5487 -668 640 251 98 3 chr10 119799344 119799663 -25789625 + L1M4c LINE L1 2302 2645 -3737 * 1008 291 69 0 chr10 119799659 119800048 -25789240 + L1M4c LINE L1 4149 4564 -1818 298 295 43 49 chr10 119800174 119800503 -25788785 + L1M4c LINE L1 4585 4911 -1471 25 51 0 0 chr10 119801097 119801136 -25788152 + AT_rich Low_complexity Low_complexity 1 39 0 808 103 63 0 chr10 119803092 119803218 -25786070 - MER85 DNA T2_type -4 135 2 1517 210 66 18 chr10 119803333 119803667 -25785621 - MLT1A2 LTR MaLR -4 370 21 2148 112 13 10 chr10 119803973 119804285 -25785003 - AluSq SINE Alu 0 313 1 22 0 0 0 chr10 119804991 119805013 -25784275 + AT_rich Low_complexity Low_complexity 1 22 0 2553 49 7 3 chr10 119805055 119805363 -25783925 + AluY SINE Alu 1 309 -2 536 320 66 0 chr10 119805676 119805873 -25783415 - MIR SINE MIR 0 262 53 409 310 76 0 chr10 119806768 119806939 -25782349 - MIR SINE MIR -48 214 31 230 175 0 18 chr10 119807854 119807911 -25781377 + GA-rich Low_complexity Low_complexity 1 56 0 212 304 25 13 chr10 119811580 119811659 -25777629 + L2 LINE L2 3193 3272 0 572 327 27 5 chr10 119811926 119812146 -25777142 - MIR SINE MIR -36 226 2 251 213 0 0 chr10 119812296 119812343 -25776945 - MER4-int LTR ERV1 -5442 1156 1110 974 186 25 63 chr10 119814687 119814924 -25774364 + L1MA9 LINE L1 5891 6118 -194 528 157 113 0 chr10 119814929 119815044 -25774244 + L1MA9 LINE L1 6180 6307 -5 524 235 40 7 chr10 119815044 119815193 -25774095 + Charlie7 DNA MER1_type 1012 1165 -1447 23 0 0 0 chr10 119815531 119815554 -25773734 + AT_rich Low_complexity Low_complexity 1 23 0 569 320 48 20 chr10 119816064 119816314 -25772974 + MIR SINE MIR 6 262 0 219 114 0 0 chr10 119817360 119817395 -25771893 + (CA)n Simple_repeat Simple_repeat 2 36 0 4550 169 40 41 chr10 119817438 119818578 -25770710 - L1PB4 LINE L1 0 6156 5021 1772 150 8 0 chr10 119818578 119818845 -25770443 - AluSx SINE Alu -20 292 24 4550 169 40 41 chr10 119818845 119819166 -25770122 - L1PB4 LINE L1 -1135 5021 4701 21 0 0 0 chr10 119819798 119819819 -25769469 + AT_rich Low_complexity Low_complexity 1 21 0 677 247 93 0 chr10 119819946 119820108 -25769180 - MER45A DNA AcHobo 0 178 2 917 184 25 12 chr10 119821053 119821216 -25768072 - MLT1A2 LTR MaLR -209 165 1 243 290 189 12 chr10 119821217 119821386 -25767902 - L1MC4 LINE L1 -423 7619 7421 896 299 26 24 chr10 119821390 119821768 -25767520 - L1MC4 LINE L1 -724 7318 6940 1925 258 61 30 chr10 119821822 119822670 -25766618 - L1MEc LINE L1 -2962 3253 2379 1284 189 33 130 chr10 119822686 119822737 -25766551 - LTR56 LTR ERV1 0 437 383 1595 159 36 77 chr10 119822737 119823128 -25766160 - THE1C LTR MaLR 0 375 1 1284 189 33 130 chr10 119823128 119823236 -25766052 - LTR56 LTR ERV1 -54 383 266 1407 88 0 0 chr10 119823236 119823428 -25765860 - L1PA8 LINE L1 -7 6165 5974 1284 189 33 130 chr10 119823428 119823779 -25765509 - LTR56 LTR ERV1 -171 266 1 1384 234 77 21 chr10 119823785 119824319 -25764969 - L1MEc LINE L1 -3998 2398 1835 671 303 67 34 chr10 119824365 119825005 -25764283 - L1MEc LINE L1 -5214 1182 522 361 321 134 5 chr10 119825012 119825221 -25764067 - LTR50 LTR ERVL -217 578 343 493 267 62 49 chr10 119825405 119825991 -25763297 - L1ME LINE L1 -585 5579 4982 196 360 29 22 chr10 119826025 119826164 -25763124 + L2 LINE L2 2952 3091 -181 648 249 10 99 chr10 119826218 119826511 -25762777 - MER102b DNA MER1_type -14 327 61 397 256 133 44 chr10 119827395 119827575 -25761713 + MIR SINE MIR 13 208 -54 228 336 8 0 chr10 119828081 119828206 -25761082 + (TG)n Simple_repeat Simple_repeat 1 126 0 2365 97 0 10 chr10 119828219 119828528 -25760760 - AluSg SINE Alu -4 306 1 497 240 50 56 chr10 119828840 119829019 -25760269 - MER5B DNA MER1_type 0 178 1 314 211 40 0 chr10 119829594 119829672 -25759616 - MER91 DNA MER1_type 0 190 113 188 355 0 0 chr10 119829889 119829951 -25759337 + L2 LINE L2 3211 3272 0 437 296 43 38 chr10 119830244 119830430 -25758858 - MIR3 SINE MIR -7 201 15 1326 97 0 11 chr10 119830637 119830813 -25758475 - AluSp SINE Alu -3 310 137 545 271 95 63 chr10 119831721 119832068 -25757220 + L1ME LINE L1 5350 5707 -414 925 240 36 5 chr10 119832886 119833107 -25756181 - MLT1C LTR MaLR 0 467 240 282 213 150 0 chr10 119833114 119833194 -25756094 - MLT1C LTR MaLR -359 108 17 195 333 19 0 chr10 119833310 119833364 -25755924 + L2 LINE L2 3212 3266 -6 249 108 0 0 chr10 119833837 119833874 -25755414 + (TA)n Simple_repeat Simple_repeat 1 37 0 421 313 146 26 chr10 119834764 119834997 -25754291 - MLT1L LTR MaLR 0 615 355 231 218 55 0 chr10 119835403 119835458 -25753830 - MLT1J LTR MaLR -344 167 110 196 388 35 9 chr10 119838356 119838472 -25750816 + L2 LINE L2 3144 3262 -10 319 148 168 20 chr10 119838583 119838684 -25750604 + L1ME3A LINE L1 5851 5966 -204 341 261 188 73 chr10 119840145 119840544 -25748744 - L1M2 LINE L1 -5899 950 506 * 379 279 146 31 chr10 119840445 119840671 -25748617 + L1M2 LINE L1 855 1106 -5743 254 323 32 21 chr10 119840965 119841058 -25748230 + L2 LINE L2 3203 3296 -17 230 289 211 7 chr10 119841227 119841369 -25747919 + MIR3 SINE MIR 36 206 -2 4650 166 43 41 chr10 119841475 119841867 -25747421 - L1MA9 LINE L1 -4 6308 5918 1794 199 20 35 chr10 119841867 119842268 -25747020 - MSTD LTR MaLR 0 396 2 4650 166 43 41 chr10 119842268 119842390 -25746898 - L1MA9 LINE L1 -394 5918 5798 2322 100 0 16 chr10 119842390 119842701 -25746587 - AluSq SINE Alu -7 306 1 4650 166 43 41 chr10 119842701 119843295 -25745993 - L1MA9 LINE L1 -514 5798 5196 2234 119 0 0 chr10 119844650 119844945 -25744343 - AluSq SINE Alu -18 295 1 21 36 0 0 chr10 119844947 119844975 -25744313 + AT_rich Low_complexity Low_complexity 1 28 0 350 305 204 20 chr10 119845114 119845467 -25743821 + L2 LINE L2 2665 3084 -188 1986 261 17 43 chr10 119846122 119846818 -25742470 + L1ME1 LINE L1 5471 6148 -18 354 283 66 0 chr10 119846908 119847014 -25742274 - MIR SINE MIR -82 180 68 29 47 0 0 chr10 119848026 119848069 -25741219 + AT_rich Low_complexity Low_complexity 1 43 0 864 206 151 66 chr10 119848136 119848408 -25740880 - AluJb SINE Alu -3 299 5 213 222 56 0 chr10 119848437 119848491 -25740797 - MIR SINE MIR -103 159 103 224 306 152 49 chr10 119848503 119849090 -25740198 - L2 LINE L2 -309 2963 2286 2168 122 3 0 chr10 119849090 119849386 -25739902 + AluSx SINE Alu 1 297 -15 224 306 152 49 chr10 119849386 119849449 -25739839 - L2 LINE L2 -986 2286 2231 226 125 83 0 chr10 119849965 119850013 -25739275 + MIR SINE MIR 97 148 -114 345 260 130 0 chr10 119850111 119850211 -25739077 + MIR SINE MIR 129 241 -21 1155 101 26 16 chr10 119850465 119850654 -25738634 + MER61D LTR ERV1 311 501 0 273 274 115 83 chr10 119851096 119851253 -25738035 - MIR SINE MIR -50 212 51 1929 130 7 27 chr10 119851256 119851555 -25737733 - AluSx SINE Alu -9 303 11 2057 154 3 3 chr10 119851576 119851888 -25737400 - AluSx SINE Alu 0 312 1 816 213 0 32 chr10 119852239 119852394 -25736894 - AluJb SINE Alu -22 290 141 488 249 76 56 chr10 119852952 119853149 -25736139 + MIR SINE MIR 61 261 -1 290 26 26 0 chr10 119854399 119854438 -25734850 + (CA)n Simple_repeat Simple_repeat 2 41 0 255 61 0 0 chr10 119854439 119854472 -25734816 + (GA)n Simple_repeat Simple_repeat 1 33 0 189 74 0 0 chr10 119854785 119854812 -25734476 + (TG)n Simple_repeat Simple_repeat 2 28 0 21 0 0 0 chr10 119855582 119855603 -25733685 + AT_rich Low_complexity Low_complexity 1 21 0 579 243 106 11 chr10 119856432 119856621 -25732667 + Charlie8 DNA MER1_type 40 246 -2171 2223 109 0 0 chr10 119856770 119857064 -25732224 - AluSx SINE Alu -14 298 5 2402 165 173 15 chr10 119857436 119857973 -25731315 + MER67C LTR ERV1 1 648 -62 216 0 0 0 chr10 119857973 119857997 -25731291 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2402 165 173 15 chr10 119857997 119858072 -25731216 + MER67C LTR ERV1 648 710 0 293 302 33 23 chr10 119859792 119859917 -25729371 + MIR SINE MIR 69 142 -66 432 258 98 31 chr10 119860195 119860358 -25728930 + MER5B DNA MER1_type 2 175 -3 227 270 87 32 chr10 119860402 119860528 -25728760 + MIR SINE MIR 64 196 -66 267 395 26 0 chr10 119860635 119860749 -25728539 + L2 LINE L2 3127 3243 -29 182 256 23 0 chr10 119863328 119863371 -25725917 - L2 LINE L2 -17 3255 3212 314 221 137 0 chr10 119863433 119863528 -25725760 - MER63 DNA MER1_type -97 739 6 246 339 103 12 chr10 119863545 119863710 -25725578 - MIR SINE MIR -71 191 12 2402 114 8 22 chr10 119863822 119864191 -25725097 + THE1B LTR MaLR 1 364 0 210 276 118 66 chr10 119865071 119865147 -25724141 - MIR SINE MIR -90 118 39 22 0 0 0 chr10 119866652 119866674 -25722614 + AT_rich Low_complexity Low_complexity 1 22 0 1426 100 43 0 chr10 119866833 119867063 -25722225 + L1MA3 LINE L1 6066 6305 0 22 0 0 0 chr10 119867063 119867085 -25722203 + AT_rich Low_complexity Low_complexity 1 22 0 500 242 83 23 chr10 119867174 119867438 -25721850 - L1ME4a LINE L1 -46 6075 5796 24 0 0 0 chr10 119868035 119868059 -25721229 + AT_rich Low_complexity Low_complexity 1 24 0 4998 154 21 2 chr10 119868059 119868980 -25720308 - L1PA16 LINE L1 -5 6161 5224 508 283 46 79 chr10 119869148 119869195 -25720093 - MIR SINE MIR -10 252 205 2207 135 3 0 chr10 119869195 119869506 -25719782 - AluSq SINE Alu -1 312 1 508 283 46 79 chr10 119869506 119869698 -25719590 - MIR SINE MIR -57 205 21 304 311 168 18 chr10 119869973 119870140 -25719148 - MIR3 SINE MIR -13 195 4 304 263 51 35 chr10 119870176 119870422 -25718866 + L1ME4a LINE L1 5652 5908 -213 2282 121 0 0 chr10 119870618 119870931 -25718357 - AluSq SINE Alu 0 313 1 480 221 0 0 chr10 119871004 119871090 -25718198 - MER5A DNA MER1_type -84 105 20 311 316 311 0 chr10 119871721 119871917 -25717371 - MIR SINE MIR -3 259 3 380 271 51 42 chr10 119871924 119872042 -25717246 - L2 LINE L2 -6 3307 3189 251 286 16 0 chr10 119872108 119872171 -25717117 + MIR3 SINE MIR 93 156 -52 1700 184 73 149 chr10 119872365 119872721 -25716567 + LTR8A LTR ERV1 35 306 -421 2610 137 31 5 chr10 119872721 119873138 -25716150 - MSTA LTR MaLR 0 428 1 1700 184 73 149 chr10 119873138 119873531 -25715757 + LTR8A LTR ERV1 306 727 0 2129 130 3 0 chr10 119873956 119874263 -25715025 + AluSq SINE Alu 1 308 -5 1382 192 58 73 chr10 119874495 119874891 -25714397 + MLT1B LTR MaLR 1 390 0 1556 263 65 64 chr10 119875632 119876350 -25712938 + MER21B LTR ERV1 1 719 -144 2243 110 0 3 chr10 119876766 119877066 -25712222 - AluSx SINE Alu -13 299 1 823 122 41 0 chr10 119877091 119877214 -25712074 + FRAM SINE Alu 35 162 -14 394 319 88 0 chr10 119877269 119877429 -25711859 + MIR SINE MIR 76 249 -13 318 313 80 30 chr10 119878584 119878785 -25710503 - MIR SINE MIR -2 260 50 4795 156 18 7 chr10 119878933 119879833 -25709455 + L1MA5 LINE L1 5385 6294 -6 3180 230 36 12 chr10 119880078 119880892 -25708396 + HERVL74 LTR ERVL 1251 2083 -3602 330 26 0 0 chr10 119881691 119881730 -25707558 + (CA)n Simple_repeat Simple_repeat 2 40 0 366 355 0 0 chr10 119882689 119882810 -25706478 - L2 LINE L2 -24 3289 3169 1993 97 13 44 chr10 119882901 119883199 -25706089 - AluSc SINE Alu -20 289 1 30 0 0 0 chr10 119883323 119883353 -25705935 + AT_rich Low_complexity Low_complexity 1 30 0 495 335 40 24 chr10 119883450 119883701 -25705587 - MIR SINE MIR -2 260 6 291 239 92 106 chr10 119884331 119884473 -25704815 + MIR SINE MIR 59 198 -64 24 53 0 0 chr10 119884909 119884947 -25704341 + AT_rich Low_complexity Low_complexity 1 38 0 1045 160 46 21 chr10 119885153 119885379 -25703909 - L1MA6 LINE L1 -126 6174 5940 732 105 38 8 chr10 119885379 119885508 -25703780 + L1MA6 LINE L1 6162 6298 -2 1045 160 46 21 chr10 119885508 119885519 -25703769 - L1MA6 LINE L1 -360 5940 5931 585 244 17 0 chr10 119885640 119885820 -25703468 + MER53 DNA DNA 5 187 -2 185 0 40 0 chr10 119886450 119886475 -25702813 + (TAA)n Simple_repeat Simple_repeat 2 27 0 2148 82 31 14 chr10 119886491 119886783 -25702505 - AluY SINE Alu -14 297 1 1113 99 7 0 chr10 119887466 119887618 -25701670 - AluSp/q SINE Alu -4 309 157 378 352 34 11 chr10 119888565 119888741 -25700547 - MIR SINE MIR -76 186 7 1643 296 75 38 chr10 119888931 119890487 -25698801 + L1ME LINE L1 20 1667 -4594 12862 76 4 1 chr10 119890493 119892320 -25696968 - L1P LINE L1 -756 5398 3560 9700 152 11 28 chr10 119892311 119894112 -25695176 - L1P LINE L1 -4365 1781 11 * 491 340 92 35 chr10 119894906 119895629 -25693659 - L2 LINE L2 -222 3050 2281 1394 220 2 68 chr10 119896143 119896543 -25692745 + MLT1A2 LTR MaLR 1 374 0 2903 85 8 2 chr10 119897031 119897431 -25691857 + L1PA8 LINE L1 5771 6172 0 2083 149 10 0 chr10 119899021 119899371 -25689917 - AluSx SINE Alu 0 353 1 467 319 97 9 chr10 119899667 119899893 -25689395 - MIR SINE MIR -14 248 3 396 271 33 0 chr10 119900354 119900476 -25688812 - LTR16C LTR ERVL 0 491 366 2320 89 0 0 chr10 119900837 119901130 -25688158 - AluY SINE Alu -17 294 2 2546 103 24 22 chr10 119901221 119901630 -25687658 - L1MA1 LINE L1 -9 6293 5884 280 322 186 11 chr10 119901853 119902036 -25687252 + MIR SINE MIR 7 221 -41 433 255 18 13 chr10 119902588 119902752 -25686536 - L1ME1 LINE L1 -5 6161 5987 1396 229 145 35 chr10 119902784 119903897 -25685391 - L1ME1 LINE L1 -239 5927 4696 7246 199 31 21 chr10 119904070 119906985 -25682303 - L1PA16 LINE L1 -2 6164 3223 1756 197 63 7 chr10 119906987 119907448 -25681840 - L1MA5 LINE L1 0 6300 5814 * 9357 202 12 33 chr10 119907439 119908029 -25681259 - L1PA16 LINE L1 0 6166 5565 2024 119 24 10 chr10 119908029 119908324 -25680964 + AluY SINE Alu 1 299 -12 9357 202 12 33 chr10 119908324 119911318 -25677970 - L1PA16 LINE L1 -601 5565 2643 557 275 59 3 chr10 119911400 119911687 -25677601 - L1MEc LINE L1 -5352 1044 742 1778 153 10 24 chr10 119911701 119911989 -25677299 + AluJo SINE Alu 3 286 -26 233 146 21 0 chr10 119911989 119912037 -25677251 + (TA)n Simple_repeat Simple_repeat 2 50 0 33 85 0 0 chr10 119912044 119912126 -25677162 + AT_rich Low_complexity Low_complexity 1 82 0 234 189 19 0 chr10 119913753 119913831 -25675457 + CT-rich Low_complexity Low_complexity 1 79 0 26 30 0 0 chr10 119915360 119915393 -25673895 + AT_rich Low_complexity Low_complexity 1 33 0 23 0 0 0 chr10 119915798 119915821 -25673467 + AT_rich Low_complexity Low_complexity 1 23 0 270 81 0 0 chr10 119915849 119915886 -25673402 + (TATATG)n Simple_repeat Simple_repeat 4 40 0 196 128 13 51 chr10 119916282 119916360 -25672928 + (TATAA)n Simple_repeat Simple_repeat 2 76 0 623 257 55 11 chr10 119916689 119916872 -25672416 - MIR SINE MIR -63 199 9 209 281 236 0 chr10 119917323 119917412 -25671876 - MER91A DNA MER1_type 0 196 87 255 331 204 14 chr10 119917413 119917555 -25671733 - MER91A DNA MER1_type -25 171 3 274 220 16 141 chr10 119918009 119918200 -25671088 + L1MB7 LINE L1 6018 6184 0 195 371 29 43 chr10 119918336 119918476 -25670812 - L2 LINE L2 -9 3263 3126 4357 147 3 74 chr10 119918480 119918800 -25670488 - L1P LINE L1 -1907 4239 3898 2536 60 0 19 chr10 119918800 119919117 -25670171 - AluY SINE Alu 0 311 1 1719 178 11 3 chr10 119919120 119919406 -25669882 - AluJb SINE Alu -20 292 5 4357 147 3 74 chr10 119919406 119920018 -25669270 - L1P LINE L1 -2250 3896 3369 * 5368 167 12 2 chr10 119920013 119921611 -25667677 + L1PA13 LINE L1 4220 5830 -331 37959 71 8 7 chr10 119921611 119927758 -25661530 + L1PA5 LINE L1 2 6154 0 1995 142 0 0 chr10 119927753 119928083 -25661205 + L1PA13 LINE L1 5814 6143 -20 * 276 244 24 24 chr10 119928519 119928601 -25660687 - MIR SINE MIR -122 140 59 2137 154 19 0 chr10 119928904 119929274 -25660014 + Tigger2 DNA MER2_type 2342 2718 0 248 145 0 92 chr10 119929960 119930036 -25659252 + (TTA)n Simple_repeat Simple_repeat 2 70 0 529 307 105 22 chr10 119931098 119931326 -25657962 - MIR SINE MIR -1 261 15 189 244 171 89 chr10 119931511 119931634 -25657654 - MIR SINE MIR -98 164 32 697 263 116 0 chr10 119932725 119932915 -25656373 + MIR SINE MIR 51 262 0 285 98 0 0 chr10 119933943 119933984 -25655304 + (TCC)n Simple_repeat Simple_repeat 1 41 0 2367 75 0 28 chr10 119934329 119934648 -25654640 + AluY SINE Alu 1 310 -1 1343 233 111 9 chr10 119934739 119935205 -25654083 - L1MC4a LINE L1 -802 7006 6500 213 267 89 44 chr10 119935206 119935296 -25653992 + MIR SINE MIR 95 188 -74 189 74 0 0 chr10 119936598 119936625 -25652663 + (CAAAAA)n Simple_repeat Simple_repeat 4 30 0 288 322 168 0 chr10 119937082 119937225 -25652063 + MIR SINE MIR 53 219 -43 1729 114 14 79 chr10 119937372 119937732 -25651556 + MER4A LTR ERV1 270 664 0 2729 117 31 45 chr10 119937924 119938189 -25651099 + MER4E LTR ERV1 1 268 -498 2354 110 0 3 chr10 119938189 119938497 -25650791 - AluSg1 SINE Alu -2 307 1 2729 117 31 45 chr10 119938497 119938838 -25650450 + MER4E LTR ERV1 268 766 0 350 333 40 7 chr10 119939089 119939239 -25650049 + MIR SINE MIR 92 246 -16 1894 135 3 0 chr10 119939400 119939697 -25649591 + L1MA4 LINE L1 5999 6296 -4 22 35 0 0 chr10 119939789 119939818 -25649470 + AT_rich Low_complexity Low_complexity 1 29 0 783 127 20 0 chr10 119940973 119941123 -25648165 + GA-rich Low_complexity Low_complexity 3 155 0 306 292 11 65 chr10 119941284 119941469 -25647819 + C-rich Low_complexity Low_complexity 5 179 0 * 348 273 23 40 chr10 119941339 119941515 -25647773 + CT-rich Low_complexity Low_complexity 5 177 0 444 345 0 0 chr10 119941542 119941681 -25647607 + C-rich Low_complexity Low_complexity 1 139 0 364 260 71 16 chr10 119941814 119941941 -25647347 - LTR52-int LTR ERVL -2258 1298 1165 236 298 83 50 chr10 119942027 119942148 -25647140 - MLT1K LTR MaLR -422 166 42 484 337 6 11 chr10 119942148 119942323 -25646965 + MLT2E LTR ERVL 1 174 -454 577 235 26 26 chr10 119942334 119942487 -25646801 - MIR SINE MIR -105 157 5 239 294 29 73 chr10 119942719 119942855 -25646433 - LTR16C LTR ERVL -4 487 358 9045 197 105 60 chr10 119944449 119946524 -25642764 + L1MD1 LINE L1 16 2237 -4303 353 58 19 0 chr10 119946524 119946576 -25642712 + (TA)n Simple_repeat Simple_repeat 1 53 0 9045 197 105 60 chr10 119946576 119947112 -25642176 + L1MD1 LINE L1 2237 2747 -3793 3745 204 72 24 chr10 119947108 119947970 -25641318 + L1MD1 LINE L1 5733 6635 -1 * 323 222 51 34 chr10 119948069 119948186 -25641102 + L1ME4a LINE L1 5999 6117 -4 252 122 0 0 chr10 119948285 119948326 -25640962 + (A)n Simple_repeat Simple_repeat 1 41 0 2741 3 0 0 chr10 119948881 119949180 -25640108 + L1HS LINE L1 5857 6155 0 252 350 60 10 chr10 119949184 119949284 -25640004 - MIR SINE MIR -133 129 25 374 0 22 0 chr10 119950265 119950311 -25638977 + (TG)n Simple_repeat Simple_repeat 2 48 0 2461 149 70 12 chr10 119950561 119950963 -25638325 + MSTB LTR MaLR 1 425 -1 249 293 67 0 chr10 119951396 119951471 -25637817 - MLT1L LTR MaLR -332 283 204 326 253 0 24 chr10 119951817 119951900 -25637388 - MLT1L LTR MaLR -534 81 1 270 289 36 0 chr10 119952474 119952557 -25636731 - MIR SINE MIR -60 148 63 9676 67 61 0 chr10 119952896 119954134 -25635154 + HERVL LTR ERVL 3230 4542 -1112 3106 224 52 29 chr10 120054138 120054995 -25534293 + L1ME1 LINE L1 5285 6161 -5 1951 206 40 2 chr10 120055016 120055463 -25533825 + L1MB7 LINE L1 5643 6106 -78 261 341 0 12 chr10 120057738 120057823 -25531465 + MIR SINE MIR 178 261 -1 345 284 0 0 chr10 120058606 120058701 -25530587 - MIR SINE MIR 0 262 168 2081 78 4 15 chr10 120058885 120059156 -25530132 + AluY SINE Alu 35 302 -9 2164 116 20 0 chr10 120060131 120060423 -25528865 + AluSx SINE Alu 1 298 -14 882 178 6 50 chr10 120060918 120061098 -25528190 - FRAM SINE Alu -9 167 1 21 36 0 0 chr10 120061821 120061849 -25527439 + AT_rich Low_complexity Low_complexity 1 28 0 519 296 17 39 chr10 120062724 120062903 -25526385 + MIR SINE MIR 13 187 -75 15188 211 23 26 chr10 120062908 120065801 -25523487 + L1PA12 LINE L1 12 2912 -4672 2176 129 48 31 chr10 120065801 120066157 -25523131 - THE1B LTR MaLR 0 364 3 12065 100 15 5 chr10 120066159 120067723 -25521565 - THE1B-int LTR MaLR 0 1580 2 2286 105 71 34 chr10 120067724 120068075 -25521213 - THE1B LTR MaLR 0 364 1 15188 211 23 26 chr10 120068075 120069544 -25519744 + L1PA12 LINE L1 2912 5442 -2142 6942 91 9 3 chr10 120069545 120070851 -25518437 + L1PA11 LINE L1 4855 6171 -3 200 282 169 8 chr10 120071279 120071403 -25517885 + L2 LINE L2 3169 3312 -1 925 102 78 0 chr10 120071453 120071581 -25517707 + MER85 DNA T2_type 1 138 -1 22 35 0 0 chr10 120071786 120071815 -25517473 + AT_rich Low_complexity Low_complexity 1 29 0 1835 72 32 8 chr10 120073053 120073326 -25515962 + L1MA1 LINE L1 6038 6316 0 459 275 100 30 chr10 120073671 120073871 -25515417 - MIR SINE MIR -37 225 12 382 277 100 39 chr10 120074659 120075031 -25514257 - L1ME LINE L1 -422 5699 5300 779 33 0 0 chr10 120075138 120075230 -25514058 + L1P LINE L1 1 92 -6054 13018 50 75 13 chr10 120075230 120076973 -25512315 + L1P LINE L1 617 2466 -3680 2515 62 0 23 chr10 120077207 120077515 -25511773 - AluY SINE Alu -10 301 1 816 244 38 34 chr10 120077702 120077940 -25511348 + MIR SINE MIR 23 261 -1 1148 166 218 42 chr10 120079246 120079577 -25509711 + MSTD LTR MaLR 1 389 -7 25 0 0 0 chr10 120079697 120079722 -25509566 + AT_rich Low_complexity Low_complexity 1 25 0 1732 181 3 13 chr10 120080453 120080767 -25508521 - AluJo SINE Alu 0 312 2 237 276 41 31 chr10 120080769 120080867 -25508421 + MIR3 SINE MIR 81 179 -29 1787 216 19 40 chr10 120081339 120081764 -25507524 - L1MA10 LINE L1 0 6334 5919 208 264 62 85 chr10 120081774 120081903 -25507385 + L2 LINE L2 3147 3272 0 1848 151 0 36 chr10 120081945 120082249 -25507039 + AluSx SINE Alu 1 293 -19 180 217 0 0 chr10 120082972 120083018 -25506270 + (CA)n Simple_repeat Simple_repeat 1 46 0 317 294 186 44 chr10 120083580 120083749 -25505539 + L2 LINE L2 2552 2696 -576 5887 62 15 6 chr10 120083749 120084491 -25504797 + L1PA6 LINE L1 5428 6176 0 317 294 186 44 chr10 120084491 120084763 -25504525 + L2 LINE L2 2696 3068 -204 1227 189 15 74 chr10 120084847 120085186 -25504102 - L1MA7 LINE L1 -2 6289 5971 1371 139 0 5 chr10 120085186 120085388 -25503900 - AluSc SINE Alu -15 294 94 508 191 16 10 chr10 120085388 120085521 -25503767 - L1MA7 LINE L1 -237 5927 5813 252 0 0 0 chr10 120085610 120085638 -25503650 + (CA)n Simple_repeat Simple_repeat 1 28 0 322 279 45 45 chr10 120085986 120086041 -25503247 + L1MC5 LINE L1 7477 7531 -430 2267 74 3 49 chr10 120086041 120086367 -25502921 + AluY SINE Alu 1 311 0 322 279 45 45 chr10 120086367 120086555 -25502733 + L1MC5 LINE L1 7530 7720 -241 832 267 18 14 chr10 120086945 120087166 -25502122 + MIR SINE MIR 3 224 -38 2351 102 0 0 chr10 120087285 120087589 -25501699 - AluSg SINE Alu -6 304 1 302 248 105 0 chr10 120087684 120087811 -25501477 - MIR SINE MIR -62 146 21 900 218 65 28 chr10 120088499 120088715 -25500573 - MER58A DNA MER1_type 0 224 1 483 269 21 14 chr10 120088740 120088885 -25500403 - MIR3 SINE MIR -61 147 2 587 313 22 11 chr10 120088927 120089109 -25500179 + MIR3 SINE MIR 18 201 -7 192 77 0 0 chr10 120090379 120090405 -25498883 + (T)n Simple_repeat Simple_repeat 1 26 0 3842 36 5 0 chr10 120090405 120090843 -25498445 - L1PA3 LINE L1 0 6155 5716 488 255 85 48 chr10 120090843 120091031 -25498257 - MIR SINE MIR -15 247 53 306 253 146 38 chr10 120091682 120091840 -25497448 + MIR SINE MIR 79 253 -9 600 259 74 17 chr10 120091840 120092050 -25497238 + MIR SINE MIR 33 248 -14 242 217 0 0 chr10 120092402 120092462 -25496826 - L1P LINE L1 -1151 4995 4936 1301 62 6 28 chr10 120092484 120092692 -25496596 - L1PA5 LINE L1 -13 6155 5966 3792 131 19 0 chr10 120092711 120093307 -25495981 + L1PA15 LINE L1 5556 6162 -3 313 348 11 0 chr10 120094274 120094366 -25494922 + MIR SINE MIR 2 94 -168 274 284 0 0 chr10 120094387 120094454 -25494834 - L2 LINE L2 -194 3078 3012 315 280 25 42 chr10 120094548 120094666 -25494622 - HAL1b LINE L1 -439 909 794 939 294 65 14 chr10 120094717 120095071 -25494217 + LTR40a LTR ERVL 10 381 -138 1782 170 57 37 chr10 120095085 120095626 -25493662 - MLT2A2 LTR ERVL 0 554 1 450 202 50 0 chr10 120095626 120095724 -25493564 + LTR40b LTR ERVL 360 462 0 817 290 83 30 chr10 120095761 120096182 -25493106 - HAL1b LINE L1 -494 854 394 2255 112 3 7 chr10 120096182 120096487 -25492801 - AluSg SINE Alu -6 304 1 817 290 83 30 chr10 120096487 120096634 -25492654 - HAL1b LINE L1 -954 394 256 196 261 63 72 chr10 120098699 120098810 -25490478 - L2 LINE L2 -2 3270 3161 204 250 66 13 chr10 120098956 120099032 -25490256 - MIR SINE MIR 0 262 183 449 342 53 11 chr10 120099364 120099551 -25489737 - MIR SINE MIR -48 214 20 186 320 39 29 chr10 120099925 120100028 -25489260 + L2 LINE L2 3143 3246 -26 2621 250 40 4 chr10 120100197 120100992 -25488296 + L1ME1 LINE L1 3609 4432 -1714 1593 139 0 88 chr10 120101006 120101337 -25487951 - MER50 LTR ERV1 0 734 433 1128 141 84 0 chr10 120101338 120101503 -25487785 - MER50 LTR ERV1 -503 231 43 441 76 0 0 chr10 120101503 120101569 -25487719 + (TG)n Simple_repeat Simple_repeat 2 67 0 1128 141 84 0 chr10 120101569 120101616 -25487672 - MER50 LTR ERV1 -691 43 1 1366 212 103 18 chr10 120101616 120102064 -25487224 + L1ME1 LINE L1 4443 4928 -1218 2226 128 16 8 chr10 120102069 120102445 -25486843 + MLT1B LTR MaLR 1 379 -11 2852 226 66 34 chr10 120102462 120102946 -25486342 + L1ME1 LINE L1 4929 5396 -770 180 0 0 0 chr10 120102946 120102966 -25486322 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 2852 226 66 34 chr10 120102966 120103661 -25485627 + L1ME1 LINE L1 5396 6161 -5 223 289 0 19 chr10 120103948 120104000 -25485288 + L3 LINE CR1 1438 1488 -89 227 313 41 75 chr10 120104036 120104183 -25485105 - MIR3 SINE MIR -40 168 27 186 339 16 71 chr10 120104179 120104306 -25484982 + MIR SINE MIR 5 124 -138 * 1026 130 25 10 chr10 120104320 120104520 -25484768 - L1MA8 LINE L1 -4 6287 6085 2334 84 0 39 chr10 120104554 120104864 -25484424 - AluSc SINE Alu -11 298 1 3289 143 34 51 chr10 120104922 120105622 -25483666 - L1MA8 LINE L1 -218 6073 5386 7977 124 24 5 chr10 120105628 120106201 -25483087 + Tigger1 DNA MER2_type 1 562 -1856 2135 121 0 13 chr10 120106201 120106499 -25482789 + AluSg SINE Alu 1 294 -16 7977 124 24 5 chr10 120106499 120107599 -25481689 + Tigger1 DNA MER2_type 562 1772 -646 323 277 10 30 chr10 120109567 120109668 -25479620 - MER5A DNA MER1_type -82 107 9 333 310 75 55 chr10 120110348 120110548 -25478740 - MIR SINE MIR -31 231 28 543 270 29 0 chr10 120110757 120110931 -25478357 - Charlie8 DNA MER1_type -2147 270 92 180 111 0 0 chr10 120110966 120110993 -25478295 + (GAA)n Simple_repeat Simple_repeat 2 28 0 267 236 12 66 chr10 120111105 120111230 -25478058 + MIR SINE MIR 75 185 -23 793 286 45 33 chr10 120111549 120111881 -25477407 + L3 LINE CR1 1201 1536 -41 1672 263 54 120 chr10 120113040 120114474 -25474814 + L1M2 LINE L1 2 1705 -5504 258 232 18 0 chr10 120114790 120114846 -25474442 - L2 LINE L2 -93 3220 3164 1861 188 13 42 chr10 120115927 120116384 -25472904 + MER41B LTR ERV1 157 600 -35 4091 132 101 45 chr10 120116462 120117244 -25472044 + LTR12 LTR ERV1 1 826 0 825 17 127 0 chr10 120117244 120117362 -25471926 + LTR12 LTR ERV1 582 714 0 502 216 9 0 chr10 120117701 120117812 -25471476 + L1MC3 LINE L1 7121 7232 -553 1613 153 69 28 chr10 120117814 120118205 -25471083 + L1MC3 LINE L1 7373 7779 -6 534 266 24 19 chr10 120118440 120118649 -25470639 - L1MEc LINE L1 -4810 2312 1940 212 98 0 49 chr10 120118649 120118690 -25470598 + (CGTG)n Simple_repeat Simple_repeat 1 39 0 1018 226 103 40 chr10 120118708 120119163 -25470125 - L1MEc LINE L1 -4918 1505 1022 187 265 20 20 chr10 120119168 120119217 -25470071 - L2 LINE L2 -94 3219 3171 380 252 58 7 chr10 120119393 120119532 -25469756 - MER117 DNA MER1_type -47 150 5 2141 133 0 3 chr10 120119769 120120071 -25469217 - AluSx SINE Alu -11 301 1 328 397 39 8 chr10 120120505 120120863 -25468425 - LTR16C LTR ERVL -2 489 121 5296 178 68 153 chr10 120120917 120122799 -25466489 - MER52A LTR ERV1 -32 1723 1 305 170 0 0 chr10 120123134 120123187 -25466101 + L1PB3 LINE L1 2493 2545 -4304 230 231 0 62 chr10 120123213 120123227 -25466061 - MER46A DNA MER2_type -79 157 148 418 189 0 44 chr10 120123227 120123317 -25465971 + Tigger4(Zombi) DNA MER2_type 2 87 -2644 * 2481 135 26 7 chr10 120123314 120123743 -25465545 + Tigger4(Zombi) DNA MER2_type 2295 2731 0 4064 232 14 5 chr10 120124243 120125376 -25463912 + L1PB3 LINE L1 2535 3677 -3172 628 300 186 9 chr10 120126278 120126601 -25462687 - L2 LINE L2 -76 3237 2858 800 257 47 12 chr10 120126782 120127183 -25462105 - L1MC4 LINE L1 -395 7647 7095 * 4051 217 20 5 chr10 120127178 120128242 -25461046 - L1 LINE L1 -2366 3780 2701 * 6576 164 27 12 chr10 120128239 120130529 -25458759 + L1PB3 LINE L1 4520 6841 -16 371 338 88 26 chr10 120131378 120131606 -25457682 - MIR SINE MIR -16 246 5 297 135 0 0 chr10 120131831 120131883 -25457405 + (CATATA)n Simple_repeat Simple_repeat 6 57 0 206 302 179 0 chr10 120131887 120131993 -25457295 - MIR SINE MIR -8 254 130 200 135 0 27 chr10 120132893 120132930 -25456358 + (TTTTC)n Simple_repeat Simple_repeat 1 36 0 291 294 60 60 chr10 120133435 120133653 -25455635 + L3b LINE CR1 1104 1321 -262 180 344 0 16 chr10 120134473 120134537 -25454751 + MIR SINE MIR 28 90 -172 219 247 0 10 chr10 120135206 120135264 -25454024 + CT-rich Low_complexity Low_complexity 2 100 0 572 267 43 11 chr10 120136327 120136514 -25452774 + MER117 DNA MER1_type 5 197 0 775 280 112 0 chr10 120136703 120136935 -25452353 - MIR SINE MIR 0 262 5 18841 39 1 0 chr10 120138760 120142165 -25447123 - L1PA4 LINE L1 0 6155 2750 23 0 0 0 chr10 120142376 120142399 -25446889 + AT_rich Low_complexity Low_complexity 1 23 0 180 0 0 0 chr10 120143140 120143160 -25446128 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 1714 172 24 0 chr10 120143191 120143488 -25445800 - AluSx SINE Alu -8 304 1 2132 69 0 11 chr10 120143702 120143964 -25445324 + AluY SINE Alu 35 293 -18 953 333 49 14 chr10 120145153 120145579 -25443709 + LTR16A LTR ERVL 1 441 -9 2364 119 8 24 chr10 120145903 120146273 -25443015 - THE1B LTR MaLR 0 364 1 11698 96 3 3 chr10 120146273 120147852 -25441436 - THE1B-int LTR MaLR 0 1580 2 1670 143 10 24 chr10 120147853 120148147 -25441141 - THE1B LTR MaLR 0 364 75 581 322 48 0 chr10 120148753 120148961 -25440327 - MIR SINE MIR -26 236 19 527 339 17 0 chr10 120149115 120149292 -25439996 - MIR SINE MIR -82 180 1 21 0 0 0 chr10 120149840 120149861 -25439427 + AT_rich Low_complexity Low_complexity 1 21 0 9858 53 8 5 chr10 120149872 120151918 -25437370 - L1PA6 LINE L1 -2 6152 4101 2216 52 35 3 chr10 120151918 120152207 -25437081 + L1PA7 LINE L1 5855 6152 -2 5172 101 39 6 chr10 120152224 120153097 -25436191 + MER4A-int LTR ERV1 1594 2495 -4103 1314 158 71 0 chr10 120153097 120153337 -25435951 - LTR8 LTR ERV1 -434 257 1 3375 140 96 34 chr10 120153337 120154227 -25435061 + MER4A-int LTR ERV1 2737 3681 -2917 * 10267 107 68 19 chr10 120154226 120155817 -25433471 + MER4A-int LTR ERV1 3837 5533 -1065 2113 119 0 3 chr10 120155817 120156110 -25433178 + AluSg SINE Alu 1 292 -18 10267 107 68 19 chr10 120156110 120156374 -25432914 + MER4A-int LTR ERV1 5533 5783 -815 4070 98 54 14 chr10 120156374 120157040 -25432248 + MER4A-int LTR ERV1 5904 6596 -2 576 113 21 10 chr10 120157048 120157145 -25432143 + MER4A LTR ERV1 1 98 -566 1710 101 14 70 chr10 120157145 120157470 -25431818 + MER4A LTR ERV1 261 624 -40 2031 137 7 0 chr10 120157470 120157763 -25431525 + AluSq SINE Alu 1 295 -18 1710 101 14 70 chr10 120157763 120157802 -25431486 + MER4A LTR ERV1 624 664 0 237 147 0 0 chr10 120158032 120158066 -25431222 + MIR SINE MIR 213 246 -16 807 161 16 78 chr10 120159514 120159707 -25429581 - MER20 DNA MER1_type 0 219 39 860 119 0 0 chr10 120159708 120159851 -25429437 + MER4-int LTR ERV1 5390 5532 -1066 2270 74 25 45 chr10 120160079 120160311 -25428977 - L1PA13 LINE L1 -5 6158 5934 2518 48 3 0 chr10 120160311 120160604 -25428684 - AluY SINE Alu -17 294 1 2270 74 25 45 chr10 120160604 120160724 -25428564 - L1PA13 LINE L1 -229 5934 5813 265 246 58 100 chr10 120161225 120161582 -25427706 - MLT1J LTR MaLR -4 507 116 487 265 77 39 chr10 120162902 120163145 -25426143 + MIR SINE MIR 6 247 -15 2229 122 17 8 chr10 120164356 120164708 -25424580 + THE1A LTR MaLR 1 355 0 383 347 71 13 chr10 120165721 120165946 -25423342 - MIR SINE MIR -10 252 15 731 233 19 37 chr10 120166353 120166568 -25422720 + L1MD2 LINE L1 6132 6342 -17 355 250 161 54 chr10 120167767 120167991 -25421297 - L1ME4a LINE L1 -81 6040 5793 300 231 77 0 chr10 120168414 120168492 -25420796 + LTR16C LTR ERVL 408 491 0 201 273 93 47 chr10 120168516 120168666 -25420622 + L2 LINE L2 2748 2904 -410 2319 108 0 10 chr10 120169863 120170170 -25419118 + AluSg SINE Alu 1 304 -6 244 282 64 13 chr10 120170623 120170701 -25418587 - L2 LINE L2 -5 3267 3186 840 170 17 78 chr10 120170994 120171224 -25418064 + MER65C LTR ERV1 244 459 -2 280 155 70 42 chr10 120171372 120171443 -25417845 - MIR SINE MIR -93 169 97 8105 31 6 0 chr10 120171444 120172468 -25416820 - L1PA5 LINE L1 -1052 5094 4065 5650 51 2 4 chr10 120172462 120173404 -25415884 + L1PA5 LINE L1 5063 6002 -152 * 4342 183 12 16 chr10 120173504 120174526 -25414762 + L1MB5 LINE L1 5151 6166 -8 258 239 81 7 chr10 120174997 120175142 -25414146 - L1MC4a LINE L1 -127 5994 5834 32397 49 2 2 chr10 120175242 120179463 -25409825 + L1P LINE L1 1 4222 -1924 3104 116 94 7 chr10 120179563 120179628 -25409660 + Tigger1 DNA MER2_type 1830 1888 -530 1502 170 79 11 chr10 120179628 120179905 -25409383 + AluJb SINE Alu 1 296 -16 3104 116 94 7 chr10 120179905 120180381 -25408907 + Tigger1 DNA MER2_type 1888 2418 0 1222 167 28 28 chr10 120180381 120180663 -25408625 - L1 LINE L1 -765 5381 5100 206 292 21 52 chr10 120180683 120180779 -25408509 + MIR SINE MIR 169 261 -1 393 307 77 122 chr10 120181683 120182912 -25406376 + L2 LINE L2 1787 2959 -355 222 196 43 0 chr10 120183077 120183123 -25406165 + L2 LINE L2 3180 3227 -86 1428 122 13 13 chr10 120183123 120183352 -25405936 - L1PA8A LINE L1 0 6131 5903 2237 102 0 0 chr10 120183654 120183947 -25405341 - AluSg SINE Alu -2 308 16 1136 197 80 70 chr10 120184524 120184910 -25404378 + MLT1B LTR MaLR 1 390 0 17552 39 51 1 chr10 120186051 120188959 -25400329 + L1PA4 LINE L1 3200 6154 -1 31 0 0 0 chr10 120188990 120189021 -25400267 + AT_rich Low_complexity Low_complexity 1 31 0 264 212 16 138 chr10 120190260 120190449 -25398839 - L1MEc LINE L1 -6194 202 37 2341 104 0 0 chr10 120190466 120190764 -25398524 - AluSc SINE Alu -11 298 1 323 238 0 0 chr10 120191320 120191383 -25397905 + L2 LINE L2 3210 3272 0 17997 54 1 4 chr10 120192267 120194480 -25394808 + L1P LINE L1 1 2206 -3940 308 277 85 43 chr10 120194943 120195084 -25394204 + MIR3 SINE MIR 48 194 -14 528 255 138 8 chr10 120195221 120195460 -25393828 - LTR50 LTR ERVL -81 714 445 663 223 124 33 chr10 120195484 120195726 -25393562 - LTR50 LTR ERVL -505 290 27 381 284 172 6 chr10 120195772 120195941 -25393347 + MER117 DNA MER1_type 1 197 0 775 338 149 11 chr10 120196194 120196665 -25392623 - L3 LINE CR1 -112 1465 930 1926 211 73 47 chr10 120197692 120198184 -25391104 - MLT1D LTR MaLR 0 505 1 419 235 43 17 chr10 120198582 120198697 -25390591 - MIR SINE MIR -33 229 112 273 167 0 0 chr10 120198960 120199008 -25390280 + MER5B DNA MER1_type 1 48 -130 275 106 43 21 chr10 120199012 120199059 -25390229 - Alu SINE Alu -10 292 245 472 88 0 0 chr10 120199561 120199618 -25389670 + AluSq/x SINE Alu 75 131 -181 2196 124 0 3 chr10 120200158 120200472 -25388816 + AluSq SINE Alu 1 313 0 261 0 0 0 chr10 120201135 120201164 -25388124 + (TG)n Simple_repeat Simple_repeat 2 30 0 430 335 112 10 chr10 120201986 120202192 -25387096 - MIR SINE MIR -16 246 20 317 333 27 33 chr10 120202712 120202862 -25386426 + MIR3 SINE MIR 15 163 -45 311 287 60 30 chr10 120202896 120203063 -25386225 + L1ME3A LINE L1 5976 6147 -23 493 293 143 36 chr10 120203871 120204264 -25385024 + L1ME3 LINE L1 5511 5945 -217 2038 125 3 16 chr10 120204321 120204625 -25384663 + AluSx SINE Alu 1 300 -12 36 23 0 0 chr10 120204803 120204846 -25384442 + AT_rich Low_complexity Low_complexity 1 43 0 329 206 48 116 chr10 120204872 120204903 -25384385 - L2 LINE L2 -1 3271 3239 1445 140 74 8 chr10 120204903 120205146 -25384142 - L1PA16 LINE L1 0 6166 5908 329 206 48 116 chr10 120205146 120205260 -25384028 - L2 LINE L2 -33 3239 3136 377 262 82 92 chr10 120206153 120206337 -25382951 - MIR3 SINE MIR -41 221 42 385 297 0 0 chr10 120207680 120207781 -25381507 + MIR SINE MIR 66 166 -96 1018 183 76 32 chr10 120210090 120210335 -25378953 - L1MA7 LINE L1 -459 5832 5579 1131 153 25 20 chr10 120210338 120210534 -25378754 + AluJb SINE Alu 1 197 -115 422 295 10 7 chr10 120210534 120210679 -25378609 - L1MC/D LINE L1 -598 5568 5426 12619 175 91 18 chr10 120210699 120211043 -25378245 - L1PB1 LINE L1 -27 6840 6522 342 0 0 0 chr10 120211043 120211081 -25378207 + (TA)n Simple_repeat Simple_repeat 1 38 0 12619 175 91 18 chr10 120211081 120213731 -25375557 - L1PB1 LINE L1 -345 6522 4066 1488 111 5 0 chr10 120213731 120213929 -25375359 - AluSg/x SINE Alu -26 284 86 12619 175 91 18 chr10 120213929 120216096 -25373192 - L1PB1 LINE L1 -2801 4066 995 253 167 0 0 chr10 120216096 120216144 -25373144 - L1PB1 LINE L1 -6669 194 147 410 338 48 14 chr10 120216480 120216687 -25372601 + MIR SINE MIR 47 260 -2 1160 212 111 48 chr10 120217056 120217163 -25372125 - L1MC4 LINE L1 -375 7667 7568 2514 66 7 0 chr10 120217163 120217465 -25371823 - AluY SINE Alu -7 304 1 1160 212 111 48 chr10 120217465 120217735 -25371553 - L1MC4 LINE L1 -474 7568 7266 29 0 0 0 chr10 120217839 120217868 -25371420 + AT_rich Low_complexity Low_complexity 1 29 0 247 256 120 8 chr10 120218186 120218303 -25370985 - L1ME LINE L1 -266 5855 5726 228 306 51 41 chr10 120219064 120219162 -25370126 - MIR3 SINE MIR -22 186 88 2352 75 0 19 chr10 120219166 120219473 -25369815 - AluY SINE Alu -10 301 1 2692 97 24 16 chr10 120219802 120220174 -25369114 + THE1C LTR MaLR 1 375 0 903 187 60 55 chr10 120220809 120221044 -25368244 - MER106A DNA MER1_type 0 236 1 1402 90 12 0 chr10 120221052 120221302 -25367986 + L1MA3 LINE L1 5511 5832 -473 430 276 74 37 chr10 120221591 120221754 -25367534 - MIR SINE MIR -3 259 91 974 60 0 0 chr10 120221786 120221902 -25367386 - AluSp/q SINE Alu -9 304 189 6703 101 31 7 chr10 120222132 120223130 -25366158 - L1MA3 LINE L1 0 6305 5284 * 12297 168 22 10 chr10 120223109 120225191 -25364097 - L1M1 LINE L1 -5458 2107 1 429 284 68 6 chr10 120225203 120225365 -25363923 + MIR SINE MIR 88 259 -3 210 225 0 0 chr10 120225386 120225426 -25363862 - L3 LINE CR1 -112 1465 1426 576 227 80 51 chr10 120225842 120226175 -25363113 - LTR16A LTR ERVL 0 450 1 797 196 22 87 chr10 120228161 120228345 -25360943 - MER58A DNA MER1_type -51 173 2 6580 21 0 0 chr10 120228418 120229127 -25360161 + L1PA3 LINE L1 5447 6155 0 1505 189 0 4 chr10 120229235 120229484 -25359804 + AluJo SINE Alu 60 307 -5 1573 218 91 0 chr10 120230735 120231065 -25358223 + MER77 LTR ERV1 236 595 -10 478 354 56 0 chr10 120231124 120231322 -25357966 + MIR SINE MIR 48 256 -6 550 298 133 31 chr10 120231571 120232110 -25357178 - L2 LINE L2 -54 3259 2680 385 311 53 63 chr10 120232117 120232307 -25356981 - MIR3 SINE MIR -12 196 9 214 336 179 9 chr10 120234138 120234357 -25354931 + L2 LINE L2 2768 3019 -253 774 342 122 30 chr10 120234458 120235121 -25354167 - L2 LINE L2 -375 2939 2216 420 320 78 16 chr10 120235129 120235373 -25353915 - L2 LINE L2 -2190 1124 866 251 303 13 13 chr10 120236750 120236826 -25352462 - MIR SINE MIR -185 77 2 1798 124 23 0 chr10 120237175 120237434 -25351854 + AluSg SINE Alu 21 285 -25 380 325 0 0 chr10 120238316 120238442 -25350846 - LTR16A1 LTR ERVL -328 129 4 500 318 89 61 chr10 120240408 120240907 -25348381 - L2 LINE L2 -36 3236 2730 360 317 110 13 chr10 120242761 120242948 -25346340 - MIR SINE MIR -46 216 15 893 221 49 117 chr10 120243578 120243904 -25345384 + MLT1E LTR MaLR 66 369 -224 304 309 71 8 chr10 120244019 120244145 -25345143 + MIR SINE MIR 73 206 -56 980 203 131 25 chr10 120244414 120244840 -25344448 - MLT1E LTR MaLR 0 593 133 285 285 65 118 chr10 120245764 120245804 -25343484 + MIR SINE MIR 55 96 -166 1718 127 8 0 chr10 120245804 120246048 -25343240 + AluSx SINE Alu 59 304 -8 285 285 65 118 chr10 120246048 120246193 -25343095 + MIR SINE MIR 96 230 -32 591 302 123 73 chr10 120247076 120247241 -25342047 + MLT1K LTR MaLR 4 159 -429 433 251 96 30 chr10 120247241 120247408 -25341880 - MER5B DNA MER1_type 0 178 1 591 302 123 73 chr10 120247408 120247748 -25341540 + MLT1K LTR MaLR 159 534 -54 6196 144 23 6 chr10 120248131 120249338 -25339950 - L1MA6 LINE L1 -3 6297 5071 228 111 0 0 chr10 120249398 120249434 -25339854 + (TGAA)n Simple_repeat Simple_repeat 2 37 0 222 302 13 87 chr10 120249638 120249787 -25339501 + MIR SINE MIR 14 151 -111 973 280 73 19 chr10 120250003 120250317 -25338971 + MER102b DNA MER1_type 1 331 -10 192 77 0 0 chr10 120250390 120250416 -25338872 + (CA)n Simple_repeat Simple_repeat 1 26 0 245 233 0 17 chr10 120251471 120251543 -25337745 + (TA)n Simple_repeat Simple_repeat 1 70 0 248 250 14 14 chr10 120251611 120251683 -25337605 + L1ME3A LINE L1 5734 5805 -365 361 96 109 0 chr10 120251683 120251839 -25337449 + (TA)n Simple_repeat Simple_repeat 1 173 0 406 120 78 6 chr10 120251881 120252048 -25337240 + (TA)n Simple_repeat Simple_repeat 1 179 0 306 85 96 0 chr10 120252119 120252213 -25337075 + (TA)n Simple_repeat Simple_repeat 1 103 0 2586 120 6 0 chr10 120252410 120252759 -25336529 - THE1A LTR MaLR 0 355 5 12428 99 2 0 chr10 120252763 120254339 -25334949 - THE1A-int LTR MaLR 0 1580 1 2621 114 8 0 chr10 120254339 120254691 -25334597 - THE1A LTR MaLR 0 355 1 199 49 49 24 chr10 120254696 120254737 -25334551 + (TTATA)n Simple_repeat Simple_repeat 5 46 0 697 213 133 36 chr10 120254760 120255009 -25334279 + L1ME3A LINE L1 5782 6054 -116 * 976 200 38 0 chr10 120255005 120255240 -25334048 + L1ME2 LINE L1 2690 2933 -3213 30 69 0 0 chr10 120255301 120255359 -25333929 + AT_rich Low_complexity Low_complexity 1 58 0 43252 41 21 2 chr10 120255673 120261696 -25327592 - L1PA3 LINE L1 0 6155 13 589 217 5 43 chr10 120262021 120262228 -25327060 + L1ME2 LINE L1 2943 3141 -3005 12973 219 21 5 chr10 120262243 120262281 -25327007 + L1PA15 LINE L1 1864 1900 -4246 234 0 0 0 chr10 120262281 120262307 -25326981 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 12973 219 21 5 chr10 120262307 120265242 -25324046 + L1PA15 LINE L1 1900 4884 -1262 5532 151 22 5 chr10 120265243 120266449 -25322839 + L1PA15 LINE L1 4940 6163 -2 37 0 0 0 chr10 120266474 120266511 -25322777 + AT_rich Low_complexity Low_complexity 1 37 0 4040 239 93 13 chr10 120266521 120267759 -25321529 + L1ME2 LINE L1 3863 5199 -947 1684 176 59 18 chr10 120268586 120269029 -25320259 + L1ME2 LINE L1 5188 5643 -523 2213 143 28 25 chr10 120269029 120269386 -25319902 - THE1B LTR MaLR 0 364 7 11983 89 4 8 chr10 120269386 120270542 -25318746 - THE1B-int LTR MaLR -8 1572 422 2200 116 10 0 chr10 120270542 120270835 -25318453 + AluSp SINE Alu 1 296 -17 11983 89 4 8 chr10 120270835 120271256 -25318032 - THE1B-int LTR MaLR -1158 422 1 2523 113 30 25 chr10 120271256 120271618 -25317670 - THE1B LTR MaLR 0 364 1 1902 218 41 31 chr10 120271618 120272071 -25317217 + L1ME2 LINE L1 5642 6102 -62 1822 138 4 15 chr10 120272071 120272340 -25316948 + AluSx SINE Alu 33 298 -14 1902 218 41 31 chr10 120272340 120272395 -25316893 + L1ME2 LINE L1 6102 6155 -9 235 301 14 14 chr10 120273363 120273436 -25315852 - L3 LINE CR1 -3 1574 1502 44044 30 21 1 chr10 120274339 120280371 -25308917 - L1HS LINE L1 -1 6154 1 235 301 14 14 chr10 120281225 120281298 -25307990 - L3 LINE CR1 -3 1574 1502 210 314 137 32 chr10 120282012 120282136 -25307152 - L2 LINE L2 -2 3270 3134 579 207 103 0 chr10 120282207 120282323 -25306965 - FLAM_A SINE Alu -5 128 1 350 349 86 0 chr10 120283331 120283483 -25305805 - L2 LINE L2 -4 3268 3104 641 104 0 47 chr10 120284715 120284821 -25304467 - LTR43 LTR ERV1 0 602 502 243 194 57 69 chr10 120284892 120285067 -25304221 + (CTAGT)n Simple_repeat Simple_repeat 2 174 0 3599 118 10 0 chr10 120285151 120285661 -25303627 - LTR43 LTR ERV1 -87 515 1 2252 191 54 50 chr10 120285941 120286479 -25302809 - MER92C LTR ERV1 -2 552 13 216 0 0 0 chr10 120286601 120286625 -25302663 + (TC)n Simple_repeat Simple_repeat 1 24 0 316 198 58 47 chr10 120287356 120287442 -25301846 + L2 LINE L2 3227 3313 0 43477 37 22 2 chr10 120287731 120293758 -25295530 + L1PA3 LINE L1 1 6146 -9 21 36 0 0 chr10 120293759 120293787 -25295501 + AT_rich Low_complexity Low_complexity 1 28 0 598 196 21 101 chr10 120294155 120294276 -25295012 + MER5B DNA MER1_type 1 103 -75 2702 107 14 0 chr10 120294276 120294642 -25294646 - THE1C LTR MaLR -2 373 3 598 196 21 101 chr10 120294642 120294709 -25294579 + MER5B DNA MER1_type 103 174 -4 215 182 23 0 chr10 120294983 120295027 -25294261 - L2 LINE L2 0 3313 3269 341 321 118 40 chr10 120295298 120295647 -25293641 + L2 LINE L2 2892 3267 -5 32 81 0 0 chr10 120295648 120295722 -25293566 + AT_rich Low_complexity Low_complexity 1 74 0 226 250 66 0 chr10 120295728 120295804 -25293484 - L1MEc LINE L1 -5456 940 860 53 40 0 0 chr10 120295809 120295883 -25293405 + AT_rich Low_complexity Low_complexity 1 74 0 317 366 6 23 chr10 120295884 120296059 -25293229 + L2 LINE L2 2688 2859 -455 389 284 92 24 chr10 120296067 120296317 -25292971 + L1MEc LINE L1 674 940 -5456 * 439 234 78 50 chr10 120296303 120296521 -25292767 + L1MEc LINE L1 2099 2322 -4074 247 286 184 30 chr10 120297488 120297656 -25291632 + MIR3 SINE MIR 1 194 -14 422 141 13 13 chr10 120297991 120298069 -25291219 + L1M4 LINE L1 5632 5709 -465 436 298 56 95 chr10 120299760 120300174 -25289114 - L2 LINE L2 -33 3239 2864 2370 85 0 0 chr10 120300174 120300467 -25288821 + AluSx SINE Alu 1 293 -19 436 298 56 95 chr10 120300467 120300628 -25288660 - L2 LINE L2 -408 2864 2698 2138 124 3 0 chr10 120301565 120302008 -25287280 + AluSp SINE Alu 1 444 0 197 301 97 11 chr10 120302895 120302988 -25286300 + L2 LINE L2 3137 3237 -35 2080 121 21 0 chr10 120303014 120303295 -25285993 + AluSg SINE Alu 1 287 -23 255 258 72 21 chr10 120303591 120303688 -25285600 - L3 LINE CR1 -149 1428 1327 345 227 16 62 chr10 120303696 120303824 -25285464 + L2 LINE L2 3192 3313 0 303 266 92 27 chr10 120303831 120304015 -25285273 - L3 LINE CR1 -251 1326 1131 260 161 16 0 chr10 120304448 120304510 -25284778 + (CA)n Simple_repeat Simple_repeat 1 63 0 381 170 64 0 chr10 120304613 120304707 -25284581 + LTR37A LTR ERV1 327 426 0 215 238 48 16 chr10 120304849 120304912 -25284376 - MIR SINE MIR -81 181 117 373 290 73 8 chr10 120304998 120305122 -25284166 - MIR SINE MIR -129 133 2 309 51 0 0 chr10 120305436 120305475 -25283813 + (CA)n Simple_repeat Simple_repeat 1 39 0 347 374 48 18 chr10 120305760 120306241 -25283047 - L2 LINE L2 -212 3060 2569 660 291 46 13 chr10 120306405 120306642 -25282646 - MIR SINE MIR -16 246 2 251 243 0 43 chr10 120306864 120306934 -25282354 - MIR SINE MIR -85 177 111 496 285 8 0 chr10 120307093 120307223 -25282065 + MER94 DNA DNA 4 134 0 185 184 102 0 chr10 120307430 120307479 -25281809 + L2 LINE L2 3209 3262 -10 467 277 29 0 chr10 120307925 120308062 -25281226 + MIR3 SINE MIR 35 175 -33 727 278 62 8 chr10 120308129 120308388 -25280900 - L1ME3A LINE L1 -32 6138 5866 270 136 0 0 chr10 120308863 120308907 -25280381 + (GGAGA)n Simple_repeat Simple_repeat 4 47 0 262 170 0 19 chr10 120310336 120310389 -25278899 + LTR67 LTR ERVL 492 543 -14 610 285 20 68 chr10 120311221 120311470 -25277818 + MIR SINE MIR 23 259 -3 1416 98 0 5 chr10 120312154 120312348 -25276940 - AluSp SINE Alu -1 312 120 2013 137 3 40 chr10 120312561 120312883 -25276405 + AluSx SINE Alu 1 310 -2 2924 129 12 22 chr10 120313136 120313626 -25275662 + MER31A LTR ERV1 1 485 0 261 170 0 0 chr10 120314951 120314998 -25274290 + HsTC2 DNA Tc2 29 75 -1823 * 263 169 92 15 chr10 120314993 120315058 -25274230 + HsTC2 DNA Tc2 1220 1289 -609 363 115 0 0 chr10 120315065 120315117 -25274171 + L1MB8 LINE L1 6119 6170 -8 290 288 188 0 chr10 120315211 120315371 -25273917 - MIR SINE MIR -70 192 3 4441 145 54 74 chr10 120315473 120316124 -25273164 + L1MC3 LINE L1 5732 6394 -1391 2406 64 0 3 chr10 120316124 120316420 -25272868 + AluY SINE Alu 1 295 -16 4441 145 54 74 chr10 120316420 120316699 -25272589 + L1MC3 LINE L1 6394 6643 -1142 207 100 0 0 chr10 120316699 120316729 -25272559 + (CATATA)n Simple_repeat Simple_repeat 5 34 0 4441 145 54 74 chr10 120316729 120316813 -25272475 + L1MC3 LINE L1 6643 6727 -1058 1380 119 0 0 chr10 120316813 120317015 -25272273 - AluSq SINE Alu 0 308 107 1077 96 0 0 chr10 120317016 120317152 -25272136 - AluSq/x SINE Alu -176 136 1 4079 142 154 82 chr10 120317154 120317294 -25271994 + L1MC3 LINE L1 6719 6848 -937 342 0 0 0 chr10 120317294 120317332 -25271956 + (CA)n Simple_repeat Simple_repeat 2 39 0 4079 142 154 82 chr10 120317332 120317529 -25271759 + L1MC3 LINE L1 6848 7030 -755 238 228 63 25 chr10 120317529 120317608 -25271680 + MLT1F1 LTR MaLR 36 117 -450 4079 142 154 82 chr10 120317608 120318187 -25271101 + L1MC3 LINE L1 7030 7785 0 566 276 67 35 chr10 120318309 120318535 -25270753 - MIR SINE MIR -3 259 25 216 261 31 0 chr10 120318573 120318638 -25270650 - L2 LINE L2 0 3313 3247 2098 122 0 14 chr10 120319034 120319350 -25269938 - AluSg SINE Alu 0 310 1 940 158 0 0 chr10 120319461 120319594 -25269694 + FRAM SINE Alu 13 145 -31 742 159 14 22 chr10 120319962 120320100 -25269188 + BC200 scRNA scRNA 1 137 -63 4456 56 6 0 chr10 120320301 120320851 -25268437 - L1PA8 LINE L1 -3 6169 5617 360 359 62 47 chr10 120320953 120321229 -25268059 - HAL1b LINE L1 -891 457 178 9858 142 96 16 chr10 120323886 120325671 -25263617 + L1M4c LINE L1 14 1941 -4443 1136 277 52 3 chr10 120325961 120326268 -25263020 - LTR16C LTR ERVL -21 470 149 219 326 76 15 chr10 120331383 120331515 -25257773 - MER5B DNA MER1_type 0 178 39 554 60 0 0 chr10 120331783 120331850 -25257438 + U4 snRNA snRNA 1 67 -78 656 269 108 12 chr10 120332200 120332535 -25256753 + L1ME4a LINE L1 5751 6117 -4 523 207 17 17 chr10 120332875 120332991 -25256297 + L3 LINE CR1 1282 1397 -180 217 136 45 0 chr10 120333184 120333228 -25256060 - MIR SINE MIR -71 137 92 501 259 189 0 chr10 120334101 120334313 -25254975 - MIR SINE MIR -5 257 6 265 239 268 10 chr10 120334629 120334835 -25254453 - MIR3 SINE MIR -6 256 6 3691 162 24 5 chr10 120335415 120336086 -25253202 + L1MB7 LINE L1 5501 6184 0 2432 55 3 3 chr10 120336594 120336883 -25252405 + AluY SINE Alu 1 289 -22 502 194 20 0 chr10 120337559 120337657 -25251631 + L1MC4 LINE L1 7943 8042 0 2020 151 0 7 chr10 120339108 120339406 -25249882 + AluJo SINE Alu 1 296 -16 374 276 98 34 chr10 120340267 120340532 -25248756 + L1ME4a LINE L1 5625 5906 -215 1686 161 53 17 chr10 120340532 120340831 -25248457 + AluJb SINE Alu 1 310 -2 32 0 0 0 chr10 120340855 120340887 -25248401 + AT_rich Low_complexity Low_complexity 1 32 0 2562 66 0 0 chr10 120340888 120341193 -25248095 + AluY SINE Alu 1 305 -6 2176 107 0 0 chr10 120341219 120341527 -25247761 + AluSg SINE Alu 3 310 0 193 154 0 26 chr10 120343834 120343873 -25245415 + MIR SINE MIR 109 146 -62 324 191 86 86 chr10 120343897 120344049 -25245239 + MER113 DNA MER1_type? 2 153 -368 526 289 124 59 chr10 120344669 120345536 -25243752 + L2 LINE L2 2347 3265 -7 416 255 123 45 chr10 120346954 120347386 -25241902 + L1ME4a LINE L1 5543 6113 -8 184 262 184 29 chr10 120348376 120348479 -25240809 + MIR SINE MIR 24 142 -66 449 244 35 9 chr10 120348537 120348652 -25240636 - L2 LINE L2 -36 3277 3160 284 282 153 0 chr10 120348996 120349081 -25240207 + L2 LINE L2 3170 3267 -5 1618 164 4 4 chr10 120351138 120351412 -25237876 - AluSx SINE Alu -8 304 31 506 255 59 0 chr10 120352203 120352356 -25236932 + Charlie7 DNA MER1_type 3 164 -2448 414 0 0 0 chr10 120352490 120352536 -25236752 + (TG)n Simple_repeat Simple_repeat 1 46 0 306 73 0 0 chr10 120352536 120352577 -25236711 + (GA)n Simple_repeat Simple_repeat 2 42 0 227 303 45 0 chr10 120352958 120353047 -25236241 + L1ME LINE L1 5802 5894 -227 430 266 55 0 chr10 120353064 120353192 -25236096 - MIR SINE MIR -38 224 90 260 250 16 0 chr10 120353392 120353456 -25235832 + MIR SINE MIR 81 145 -63 225 376 0 32 chr10 120355056 120355181 -25234107 - L2 LINE L2 -25 3247 3127 678 182 8 8 chr10 120355722 120355843 -25233445 - MIR SINE MIR -140 122 2 313 226 70 61 chr10 120355899 120356014 -25233274 - MIR SINE MIR -127 135 20 1950 136 3 19 chr10 120356188 120356505 -25232783 + AluJb SINE Alu 1 312 0 196 318 16 0 chr10 120356642 120356705 -25232583 + MIR SINE MIR 78 141 -67 780 299 168 22 chr10 120357679 120358207 -25231081 + L2 LINE L2 2513 3174 -139 1401 209 30 0 chr10 120358207 120358508 -25230780 - AluJb SINE Alu -1 311 2 780 299 168 22 chr10 120358508 120358671 -25230617 + L2 LINE L2 3174 3312 -1 1234 125 173 0 chr10 120358731 120358939 -25230349 + MLT1D LTR MaLR 262 505 0 569 229 126 6 chr10 120359016 120359199 -25230089 - Charlie8 DNA MER1_type -2181 236 32 563 220 45 68 chr10 120359453 120359598 -25229690 - MIR SINE MIR -70 192 50 2128 119 0 0 chr10 120359598 120359893 -25229395 - AluSx SINE Alu -17 295 1 563 220 45 68 chr10 120359893 120359924 -25229364 - MIR SINE MIR -212 50 20 414 227 260 0 chr10 120360076 120360221 -25229067 + MIR SINE MIR 32 202 -60 514 290 98 34 chr10 120361088 120361499 -25227789 + MLT1J2 LTR MaLR 1 443 -7 4234 39 44 6 chr10 120362842 120363361 -25225927 + L1PA5 LINE L1 5612 6150 -4 188 323 32 21 chr10 120363381 120363474 -25225814 + L2 LINE L2 2968 3061 -211 574 130 26 43 chr10 120363525 120363640 -25225648 + Charlie5 DNA MER1_type 11 123 -2489 1638 173 65 8 chr10 120363642 120364011 -25225277 + Charlie5 DNA MER1_type 2234 2623 0 651 221 30 128 chr10 120364201 120364436 -25224852 - MIR SINE MIR -44 218 7 1993 130 3 3 chr10 120365785 120366084 -25223204 - AluSx SINE Alu -13 299 1 538 205 17 8 chr10 120366433 120366550 -25222738 - MER103 DNA DNA 0 166 49 4459 156 35 19 chr10 120366551 120367153 -25222135 + L1MB2 LINE L1 5324 5944 -227 2045 99 3 17 chr10 120367153 120367447 -25221841 - AluSg SINE Alu -20 290 1 4459 156 35 19 chr10 120367447 120367678 -25221610 + L1MB2 LINE L1 5944 6170 -1 249 146 0 0 chr10 120368118 120368166 -25221122 + (CA)n Simple_repeat Simple_repeat 1 48 0 220 322 21 84 chr10 120368600 120368839 -25220449 + L2 LINE L2 2836 3059 -213 188 307 167 44 chr10 120369098 120369212 -25220076 + L2 LINE L2 3143 3270 -2 1977 128 3 0 chr10 120370262 120370560 -25218728 + AluSc SINE Alu 1 299 -10 333 253 48 45 chr10 120370592 120370760 -25218528 + HAL1b LINE L1 1191 1338 -10 182 316 35 18 chr10 120370811 120370868 -25218420 + MIR SINE MIR 32 89 -119 2311 80 0 3 chr10 120370928 120371229 -25218059 + AluY SINE Alu 1 300 -11 3598 146 16 45 chr10 120371720 120372206 -25217082 - L1MC1 LINE L1 -1 6332 5872 2152 111 3 0 chr10 120372206 120372504 -25216784 + AluSp SINE Alu 1 299 -14 3598 146 16 45 chr10 120372504 120372721 -25216567 - L1MC1 LINE L1 -461 5872 5650 732 172 47 23 chr10 120373225 120373353 -25215935 - FLAM_A SINE Alu -2 131 1 192 250 0 0 chr10 120373636 120373672 -25215616 + MER5B DNA MER1_type 10 45 -133 286 204 0 0 chr10 120373673 120373722 -25215566 - MER5B DNA MER1_type -84 94 46 381 230 30 20 chr10 120374568 120374668 -25214620 + MIR SINE MIR 162 262 0 212 371 10 10 chr10 120375193 120375290 -25213998 + MIR SINE MIR 156 252 -10 594 292 109 5 chr10 120375456 120375648 -25213640 - MIR SINE MIR -48 214 3 201 195 0 24 chr10 120375830 120375871 -25213417 + CT-rich Low_complexity Low_complexity 2 41 0 2319 66 3 3 chr10 120376458 120376759 -25212529 + AluSp SINE Alu 1 301 -12 424 267 50 17 chr10 120377437 120377617 -25211671 - L1MEd LINE L1 -5294 825 640 285 279 0 0 chr10 120377769 120377848 -25211440 - L1MEd LINE L1 -5917 202 124 1234 273 57 59 chr10 120377851 120378407 -25210881 - L2 LINE L2 -1 3312 2767 4927 198 42 29 chr10 120378592 120379866 -25209422 + L1MB8 LINE L1 3665 4955 -1191 1421 130 0 5 chr10 120379868 120380083 -25209205 + AluJb SINE Alu 95 308 -4 1715 158 7 3 chr10 120380085 120380377 -25208911 + AluJb SINE Alu 3 295 -17 2208 55 0 0 chr10 120380423 120380695 -25208593 + AluY SINE Alu 1 272 -39 986 97 0 29 chr10 120380695 120380703 -25208585 + (GGAA)n Simple_repeat Simple_repeat 1 177 0 986 97 0 29 chr10 120380703 120380878 -25208410 + (GGAA)n Simple_repeat Simple_repeat 3 172 0 2471 165 43 13 chr10 120380924 120381696 -25207592 + L1MB8 LINE L1 4974 5853 -325 2343 84 0 10 chr10 120381696 120382007 -25207281 + AluSc SINE Alu 2 309 0 2471 165 43 13 chr10 120382007 120382343 -25206945 + L1MB8 LINE L1 5853 6177 -1 259 269 142 82 chr10 120382471 120382490 -25206798 - MIR3 SINE MIR -22 186 170 1631 177 0 30 chr10 120382490 120382789 -25206499 - AluJo SINE Alu -22 290 1 259 269 142 82 chr10 120382789 120382903 -25206385 - MIR3 SINE MIR -38 170 45 496 314 29 29 chr10 120383098 120383273 -25206015 - MIR3 SINE MIR -10 198 24 989 274 137 28 chr10 120383596 120384026 -25205262 + MLT1K LTR MaLR 11 487 -101 217 224 17 0 chr10 120385433 120385491 -25203797 + (CGGG)n Simple_repeat Simple_repeat 4 62 0 21 36 0 0 chr10 120385516 120385544 -25203744 + GC_rich Low_complexity Low_complexity 1 28 0 1245 258 131 45 chr10 120385921 120386841 -25202447 + L2 LINE L2 2306 3313 0 352 317 0 0 chr10 120386846 120386928 -25202360 + L2 LINE L2 3193 3274 -39 1876 104 66 3 chr10 120387448 120387735 -25201553 - AluSq SINE Alu -8 305 1 473 322 17 23 chr10 120387910 120388087 -25201201 - MIR SINE MIR -81 181 6 216 254 0 63 chr10 120388073 120388136 -25201152 - L3 LINE CR1 -13 1564 1506 * 2442 188 22 9 chr10 120388227 120388680 -25200608 + MLT1C LTR MaLR 6 464 -3 300 273 45 23 chr10 120388992 120389124 -25200164 + MLT1K LTR MaLR 377 511 -77 2408 77 0 0 chr10 120389232 120389543 -25199745 - AluY SINE Alu 0 311 1 1715 171 0 4 chr10 120389620 120389901 -25199387 - AluJo SINE Alu -30 282 3 194 302 189 69 chr10 120390955 120391114 -25198174 + MIR3 SINE MIR 11 188 -20 1958 113 0 37 chr10 120391174 120391474 -25197814 - AluSx SINE Alu 0 312 24 4622 153 34 31 chr10 120391496 120392481 -25196807 - L1MB8 LINE L1 -1 6177 5188 347 342 78 26 chr10 120392522 120392542 -25196746 + MER102a DNA MER1_type 87 105 -1312 2194 93 3 3 chr10 120392542 120392852 -25196436 + AluSp SINE Alu 4 313 0 347 342 78 26 chr10 120392852 120393062 -25196226 + MER102a DNA MER1_type 105 329 -1 2935 172 37 30 chr10 120393695 120393819 -25195469 - L1MB8 LINE L1 0 6178 6056 2231 109 0 0 chr10 120393819 120394131 -25195157 - AluSx SINE Alu 0 312 1 2935 172 37 30 chr10 120394131 120394647 -25194641 - L1MB8 LINE L1 -122 6056 5533 486 303 75 16 chr10 120394946 120395134 -25194154 - MIR3 SINE MIR -4 204 6 334 317 63 44 chr10 120395243 120395345 -25193943 + Charlie8 DNA MER1_type 22 121 -220 2332 68 0 0 chr10 120395345 120395641 -25193647 + AluY SINE Alu 1 296 -15 334 317 63 44 chr10 120395641 120395743 -25193545 + Charlie8 DNA MER1_type 121 230 -111 251 230 54 40 chr10 120395742 120395816 -25193472 + Charlie8 DNA MER1_type 1353 1427 -990 * 576 295 54 12 chr10 120396529 120396770 -25192518 + MIR SINE MIR 12 262 0 282 218 0 0 chr10 120396819 120396874 -25192414 - MIR3 SINE MIR -3 205 151 1876 153 72 38 chr10 120397520 120398017 -25191271 + L1MA9 LINE L1 5718 6266 -46 2715 52 0 0 chr10 120398347 120398657 -25190631 - AluY SINE Alu -1 310 1 992 141 14 73 chr10 120398690 120398910 -25190378 - L1MA9 LINE L1 -318 5994 5788 240 217 0 0 chr10 120398975 120399021 -25190267 - MIR SINE MIR -9 253 208 301 319 88 22 chr10 120399161 120399343 -25189945 + L2 LINE L2 3054 3247 -25 261 200 0 0 chr10 120399533 120399578 -25189710 - L2 LINE L2 -16 3256 3212 671 251 76 28 chr10 120399940 120400231 -25189057 - L2 LINE L2 -8 3305 3001 1736 185 20 10 chr10 120400823 120401126 -25188162 + AluJo SINE Alu 1 306 -6 184 317 73 8 chr10 120401267 120401390 -25187898 + MIR3 SINE MIR 61 191 -17 1607 252 73 14 chr10 120401419 120401923 -25187365 + L1ME3A LINE L1 5631 6164 -6 307 284 40 7 chr10 120401916 120402064 -25187224 + L1M4 LINE L1 5015 5167 -979 * 636 322 0 5 chr10 120402162 120402361 -25186927 - MIR SINE MIR -34 228 31 871 224 36 0 chr10 120402905 120403101 -25186187 + MER3 DNA MER1_type 1 203 -6 2036 121 7 0 chr10 120403967 120404239 -25185049 + AluSx SINE Alu 17 290 -22 270 116 0 0 chr10 120404239 120404282 -25185006 + (GA)n Simple_repeat Simple_repeat 1 43 0 698 18 9 54 chr10 120404282 120404393 -25184895 + (GGAA)n Simple_repeat Simple_repeat 4 109 0 2328 131 40 47 chr10 120404897 120405326 -25183962 - MSTB LTR MaLR 0 426 1 2291 89 0 0 chr10 120405757 120405768 -25183520 - AluY SINE Alu -19 292 282 324 0 0 0 chr10 120405768 120405804 -25183484 + (TG)n Simple_repeat Simple_repeat 1 36 0 2291 89 0 0 chr10 120405804 120406084 -25183204 - AluY SINE Alu -28 283 1 410 288 125 86 chr10 120406485 120406988 -25182300 + MLT1K LTR MaLR 30 552 -36 893 133 105 7 chr10 120406995 120407138 -25182150 + Tigger1 DNA MER2_type 1 157 -2261 * 1326 142 24 0 chr10 120407127 120407339 -25181949 + Tigger1 DNA MER2_type 2202 2418 0 21 0 0 0 chr10 120407518 120407539 -25181749 + AT_rich Low_complexity Low_complexity 1 21 0 1462 304 25 44 chr10 120408091 120408679 -25180609 + MLT1K LTR MaLR 4 580 -8 287 221 32 4 chr10 120409080 120409174 -25180114 - MIR SINE MIR -65 143 80 2199 89 0 34 chr10 120409989 120410314 -25178974 + AluY SINE Alu 1 315 0 542 288 29 6 chr10 120410580 120410750 -25178538 - MIR SINE MIR -54 208 35 202 138 0 0 chr10 120410824 120410853 -25178435 - L2 LINE L2 -37 3235 3207 240 258 0 16 chr10 120411671 120411733 -25177555 - MLT1K LTR MaLR -345 243 183 879 156 0 78 chr10 120411825 120412030 -25177258 - MER53 DNA DNA 0 189 1 450 213 50 78 chr10 120413091 120413232 -25176056 + MER112 DNA MER1_type 115 251 -9 457 242 13 74 chr10 120413555 120413619 -25175669 - MER91C DNA MER1_type 0 140 74 2276 93 0 39 chr10 120413619 120413931 -25175357 + AluSg SINE Alu 1 300 -10 457 242 13 74 chr10 120413931 120414015 -25175273 - MER91C DNA MER1_type -66 74 1 207 0 0 0 chr10 120414546 120414569 -25174719 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 937 226 0 0 chr10 120415145 120415326 -25173962 + AluJo SINE Alu 127 307 -5 210 37 0 0 chr10 120415326 120415353 -25173935 + (GA)n Simple_repeat Simple_repeat 2 28 0 1233 260 69 27 chr10 120415630 120416034 -25173254 - MLT1J2 LTR MaLR -21 429 9 2529 161 85 2 chr10 120416587 120416838 -25172450 - LTR54 LTR ERV1 0 510 281 1502 150 4 0 chr10 120416838 120417064 -25172224 - AluJo SINE Alu -2 310 84 2529 161 85 2 chr10 120417064 120417283 -25172005 - LTR54 LTR ERV1 -229 281 1 213 157 59 0 chr10 120417674 120417725 -25171563 + T-rich Low_complexity Low_complexity 2 55 0 804 279 105 37 chr10 120418116 120418467 -25170821 - MLT1J2 LTR MaLR -2 448 74 1262 213 0 4 chr10 120418519 120418744 -25170544 + MER58A DNA MER1_type 1 224 0 896 186 47 98 chr10 120418757 120419031 -25170257 + MLT1K LTR MaLR 327 586 -2 2372 166 10 17 chr10 120420513 120420929 -25168359 - MLT2C2 LTR ERVL -48 416 4 663 205 43 97 chr10 120422052 120422169 -25167119 - MIR SINE MIR 0 262 140 2328 89 3 3 chr10 120422169 120422471 -25166817 - AluY SINE Alu -9 302 1 663 205 43 97 chr10 120422471 120422552 -25166736 - MIR SINE MIR -122 140 79 707 197 21 64 chr10 120422552 120422740 -25166548 + MER104 DNA MER2_type 1 180 0 663 205 43 97 chr10 120422740 120422798 -25166490 - MIR SINE MIR -183 79 19 357 43 0 0 chr10 120423304 120423351 -25165937 + (TG)n Simple_repeat Simple_repeat 2 48 0 490 244 141 14 chr10 120424387 120424600 -25164688 + MIR SINE MIR 2 232 -30 2130 125 0 28 chr10 120424927 120425248 -25164040 - AluSq SINE Alu -1 312 1 198 216 39 0 chr10 120425467 120425518 -25163770 + L2 LINE L2 3028 3080 -192 579 110 0 5 chr10 120425635 120425759 -25163529 - MER53 DNA DNA -1 188 3 495 289 30 60 chr10 120426053 120426189 -25163099 + MIR SINE MIR 60 190 -72 1996 137 0 20 chr10 120426189 120426495 -25162793 + AluJb SINE Alu 1 300 -12 495 289 30 60 chr10 120426495 120426559 -25162729 + MIR SINE MIR 190 254 -8 2485 77 0 0 chr10 120426895 120427195 -25162093 - AluSc SINE Alu -9 300 1 409 190 209 81 chr10 120427855 120427938 -25161350 + L1MC5 LINE L1 7623 7694 -267 2163 117 0 3 chr10 120427938 120428229 -25161059 - AluSx SINE Alu -22 290 1 409 190 209 81 chr10 120428229 120428403 -25160885 + L1MC5 LINE L1 7694 7913 -48 210 184 0 41 chr10 120429765 120429814 -25159474 - MER5B DNA MER1_type -126 52 6 223 184 20 0 chr10 120430512 120430561 -25158727 + (CA)n Simple_repeat Simple_repeat 1 50 0 50 59 0 0 chr10 120430659 120430744 -25158544 + AT_rich Low_complexity Low_complexity 1 85 0 306 354 36 47 chr10 120430750 120430942 -25158346 + MIR SINE MIR 28 217 -45 423 251 90 90 chr10 120432354 120432514 -25156774 + MIR SINE MIR 1 163 -99 2106 67 94 0 chr10 120432514 120432781 -25156507 + AluSx SINE Alu 1 292 -20 423 251 90 90 chr10 120432781 120432843 -25156445 + MIR SINE MIR 162 223 -39 992 192 63 24 chr10 120432922 120433177 -25156111 - L1MD3 LINE L1 -1 7994 7730 499 135 0 0 chr10 120433306 120433380 -25155908 - AluJ/FLAM SINE Alu -213 99 26 457 226 212 0 chr10 120434329 120434475 -25154813 + MER5A DNA MER1_type 12 188 -1 1127 243 222 43 chr10 120434497 120434934 -25154354 - LTR33 LTR ERVL -6 515 1 544 241 55 80 chr10 120435295 120435532 -25153756 + MIR SINE MIR 29 259 -3 2395 56 0 46 chr10 120435887 120436191 -25153097 + AluY SINE Alu 1 290 -21 2424 66 0 25 chr10 120436203 120436520 -25152768 + AluY SINE Alu 1 309 -2 191 36 36 0 chr10 120437160 120437188 -25152100 + (GAA)n Simple_repeat Simple_repeat 2 30 0 182 301 21 21 chr10 120438143 120438236 -25151052 + MIR SINE MIR 53 145 -117 204 291 172 20 chr10 120438264 120438415 -25150873 - MER5B DNA MER1_type -2 176 3 24 0 0 0 chr10 120438528 120438552 -25150736 + AT_rich Low_complexity Low_complexity 1 24 0 390 274 260 5 chr10 120438728 120438932 -25150356 - MIR SINE MIR 0 262 7 369 311 11 53 chr10 120439043 120439233 -25150055 + MER5A DNA MER1_type 8 189 0 967 197 211 59 chr10 120439800 120440238 -25149050 - L1ME2 LINE L1 -1 6177 5722 1509 65 90 0 chr10 120440995 120441196 -25148092 + L1PA10 LINE L1 5939 6157 -11 24 0 0 0 chr10 120441196 120441220 -25148068 + AT_rich Low_complexity Low_complexity 1 24 0 584 197 0 138 chr10 120442040 120442258 -25147030 + MIR SINE MIR 74 261 -1 23 0 0 0 chr10 120442271 120442294 -25146994 + AT_rich Low_complexity Low_complexity 1 23 0 344 256 5 43 chr10 120443106 120443240 -25146048 + MIR SINE MIR 101 226 -36 1802 117 23 23 chr10 120443322 120443586 -25145702 + AluSg SINE Alu 32 295 -15 3525 133 36 3 chr10 120444520 120445097 -25144191 + L1MB2 LINE L1 5572 6167 -4 23 0 0 0 chr10 120445098 120445121 -25144167 + AT_rich Low_complexity Low_complexity 1 23 0 513 47 0 0 chr10 120445204 120445268 -25144020 + (TTTTA)n Simple_repeat Simple_repeat 3 66 0 1842 146 15 0 chr10 120445273 120445547 -25143741 - AluJb SINE Alu -34 278 1 2403 140 62 15 chr10 120445950 120446350 -25142938 + MLT1C LTR MaLR 3 421 -46 253 0 0 0 chr10 120446526 120446554 -25142734 + (TTTG)n Simple_repeat Simple_repeat 1 156 0 2103 125 0 0 chr10 120446554 120446835 -25142453 - AluSx SINE Alu -31 281 1 5544 81 13 8 chr10 120446887 120448022 -25141266 - L1PB1 LINE L1 0 6151 5020 3048 191 3 0 chr10 120448039 120448694 -25140594 + L1PB1 LINE L1 4362 5018 -1128 1013 147 0 0 chr10 120448778 120448928 -25140360 + AluSq/x SINE Alu 1 150 -162 227 295 71 9 chr10 120448950 120449062 -25140226 - L1MC/D LINE L1 -2107 5701 5583 474 261 85 13 chr10 120449066 120449219 -25140069 + MIR SINE MIR 25 188 -74 201 313 70 47 chr10 120449337 120449465 -25139823 - L2 LINE L2 -1 3271 3141 311 344 95 0 chr10 120450439 120450628 -25138660 + L2 LINE L2 2545 2751 -563 772 223 17 43 chr10 120450791 120451024 -25138264 + L1ME3A LINE L1 5944 6170 0 322 291 128 44 chr10 120451077 120451280 -25138008 + L2 LINE L2 2840 3059 -213 283 215 15 15 chr10 120451466 120451531 -25137757 - Charlie4a DNA MER1_type 0 508 444 2023 117 7 3 chr10 120451533 120451823 -25137465 - AluSq SINE Alu -20 293 3 744 129 9 0 chr10 120451843 120451959 -25137329 - AluSg/x SINE Alu -6 303 187 1415 213 119 5 chr10 120451980 120452384 -25136904 - L1ME3A LINE L1 -38 6132 5683 1453 196 99 5 chr10 120452397 120452810 -25136478 - Charlie4a DNA MER1_type -55 453 2 230 352 102 19 chr10 120452813 120452921 -25136367 + L2 LINE L2 3150 3266 -6 630 306 91 5 chr10 120452935 120453144 -25136144 - MIR SINE MIR -1 261 35 195 204 0 0 chr10 120453209 120453253 -25136035 + (TGAA)n Simple_repeat Simple_repeat 1 44 0 256 235 70 128 chr10 120453924 120454383 -25134905 - L1ME4a LINE L1 -2 6119 5688 366 306 28 58 chr10 120455035 120455077 -25134211 - MIR SINE MIR -14 248 206 2386 72 0 7 chr10 120455077 120455381 -25133907 - AluY SINE Alu -9 302 1 366 306 28 58 chr10 120455381 120455589 -25133699 - MIR SINE MIR -56 206 2 213 333 14 0 chr10 120455597 120455666 -25133622 + L3 LINE CR1 1306 1375 -202 197 315 0 55 chr10 120455693 120455766 -25133522 + L3 LINE CR1 1463 1531 -46 299 257 40 0 chr10 120455808 120455882 -25133406 - MIR SINE MIR -65 143 67 2365 70 3 7 chr10 120456153 120456452 -25132836 - AluY SINE Alu -13 298 1 2183 171 78 14 chr10 120457346 120457780 -25131508 - LTR32 LTR ERVL 0 471 10 748 233 48 29 chr10 120457781 120457987 -25131301 + MIR SINE MIR 53 262 0 22 0 0 0 chr10 120458111 120458133 -25131155 + AT_rich Low_complexity Low_complexity 1 22 0 284 244 37 128 chr10 120459725 120459889 -25129399 + MER5A DNA MER1_type 41 189 0 354 246 54 98 chr10 120459909 120460112 -25129176 - L2 LINE L2 -16 3297 3104 * 1208 293 110 26 chr10 120460111 120461014 -25128274 + L2 LINE L2 2329 3312 -1 527 263 99 6 chr10 120461466 120461637 -25127651 + MIR SINE MIR 72 258 -4 28 61 0 0 chr10 120461656 120461705 -25127583 + AT_rich Low_complexity Low_complexity 1 49 0 2374 100 0 0 chr10 120461856 120462155 -25127133 - AluSx SINE Alu -12 300 2 296 203 16 16 chr10 120462398 120462462 -25126826 - L2 LINE L2 -1 3312 3249 765 273 39 26 chr10 120462627 120462858 -25126430 + MIR SINE MIR 29 262 0 366 237 141 58 chr10 120462978 120463069 -25126219 - MIR SINE MIR -33 229 147 2102 146 0 0 chr10 120463069 120463370 -25125918 + AluJb SINE Alu 1 301 -11 366 237 141 58 chr10 120463370 120463434 -25125854 - MIR SINE MIR -115 147 61 182 217 65 0 chr10 120463543 120463589 -25125699 + MER5B DNA MER1_type 10 58 -120 289 344 23 16 chr10 120463619 120463761 -25125527 - MER5B DNA MER1_type -45 133 1 1669 123 4 0 chr10 120463947 120464175 -25125113 + AluSq SINE Alu 1 229 -84 2347 72 0 3 chr10 120464218 120464510 -25124778 - AluY SINE Alu -20 291 1 228 35 0 0 chr10 120465239 120465268 -25124020 + (TG)n Simple_repeat Simple_repeat 1 29 0 580 274 48 73 chr10 120465391 120465639 -25123649 - MIR SINE MIR 0 262 21 1417 65 0 0 chr10 120466189 120466357 -25122931 + AluY SINE Alu 1 168 -143 248 128 0 0 chr10 120466458 120466497 -25122791 + Alu SINE Alu 191 229 -73 1159 80 0 0 chr10 120466498 120466636 -25122652 - AluSc SINE Alu -171 138 1 317 294 28 28 chr10 120466640 120466749 -25122539 - MIR3 SINE MIR -37 171 63 2478 67 0 0 chr10 120467089 120467386 -25121902 - AluSg1 SINE Alu -11 298 2 25 0 0 0 chr10 120467617 120467642 -25121646 + AT_rich Low_complexity Low_complexity 1 25 0 390 115 0 0 chr10 120468002 120468063 -25121225 + (CTG)n Simple_repeat Simple_repeat 1 61 0 488 160 351 32 chr10 120472643 120472831 -25116457 - MIR SINE MIR -2 260 13 802 113 15 23 chr10 120474791 120474924 -25114364 - FLAM_A SINE Alu 0 133 2 1969 123 0 20 chr10 120475111 120475431 -25113857 - AluSx SINE Alu 0 312 1 2356 78 3 13 chr10 120476547 120476855 -25112433 - AluSp SINE Alu -8 305 1 1617 77 0 5 chr10 120476911 120477119 -25112169 - AluSc SINE Alu -20 289 83 2362 81 3 0 chr10 120477406 120477701 -25111587 - AluY SINE Alu -14 297 2 354 236 169 0 chr10 120479118 120479207 -25110081 - MIR SINE MIR -154 108 5 2366 101 3 3 chr10 120480273 120480580 -25108708 + AluSx SINE Alu 1 307 -5 2463 68 0 0 chr10 120481375 120481682 -25107606 - AluY SINE Alu -4 307 1 1249 247 107 16 chr10 120482203 120482576 -25106712 - L2 LINE L2 0 3313 2907 1308 236 179 11 chr10 120482601 120483058 -25106230 - L2 LINE L2 -556 2758 2225 2833 153 33 46 chr10 120483278 120483910 -25105378 + L1MB7 LINE L1 5541 6164 -20 258 54 0 0 chr10 120484486 120484523 -25104765 - L1MB7 LINE L1 -16 6168 6132 23 68 0 0 chr10 120484526 120484570 -25104718 + AT_rich Low_complexity Low_complexity 1 44 0 232 305 93 26 chr10 120484767 120484918 -25104370 - L2 LINE L2 -178 3094 2934 221 270 206 26 chr10 120484948 120485181 -25104107 - L2 LINE L2 -456 2858 2584 1547 133 91 18 chr10 120485207 120485492 -25103796 + MLT1A1 LTR MaLR 60 365 0 1818 119 25 0 chr10 120485916 120486202 -25103086 + L1PA16 LINE L1 5865 6157 -9 1500 130 130 22 chr10 120486953 120487223 -25102065 - AluSg1 SINE Alu -10 299 1 46 33 0 0 chr10 120487326 120487386 -25101902 + AT_rich Low_complexity Low_complexity 1 60 0 236 374 48 20 chr10 120487650 120487797 -25101491 - MIR3 SINE MIR -57 151 1 2484 69 7 0 chr10 120488302 120488607 -25100681 - AluSp SINE Alu -6 307 1 637 147 181 8 chr10 120489418 120489673 -25099615 - Charlie5 DNA MER1_type -10 2602 5 507 262 60 42 chr10 120490033 120490201 -25099087 + MIR SINE MIR 81 251 -11 2237 85 34 3 chr10 120490319 120490612 -25098676 + AluSx SINE Alu 1 302 -10 1605 80 5 0 chr10 120490904 120491104 -25098184 - AluSp SINE Alu -10 303 103 2539 66 3 0 chr10 120492081 120492383 -25096905 + AluSp SINE Alu 1 303 -10 691 174 52 7 chr10 120492663 120492818 -25096470 + MER33 DNA MER1_type 11 172 -152 2183 99 10 7 chr10 120493035 120493338 -25095950 + AluSp SINE Alu 3 306 -7 526 294 111 21 chr10 120493341 120493576 -25095712 - MIR SINE MIR -4 258 3 434 188 70 8 chr10 120493870 120493998 -25095290 - L1MA8 LINE L1 -44 6247 6112 203 280 0 0 chr10 120494460 120494510 -25094778 + A-rich Low_complexity Low_complexity 1 50 0 200 295 74 42 chr10 120494640 120494735 -25094553 + MIR SINE MIR 3 100 -162 21 0 0 0 chr10 120495682 120495703 -25093585 + AT_rich Low_complexity Low_complexity 1 21 0 258 265 52 44 chr10 120495953 120496089 -25093199 - MER103 DNA DNA -9 157 21 54 16 0 0 chr10 120496466 120496527 -25092761 + AT_rich Low_complexity Low_complexity 1 61 0 736 208 27 0 chr10 120497663 120497812 -25091476 - MER5A DNA MER1_type -1 188 36 2147 107 7 3 chr10 120497910 120498208 -25091080 + AluSx SINE Alu 2 300 -12 2285 74 27 0 chr10 120498415 120498711 -25090577 - AluY SINE Alu -7 304 1 279 231 132 44 chr10 120499144 120499235 -25090053 - MIR3 SINE MIR -35 173 75 2258 106 3 3 chr10 120499362 120499664 -25089624 + AluSx SINE Alu 1 302 -10 262 206 32 87 chr10 120499771 120499824 -25089464 - L1ME4a LINE L1 -1 6120 6066 2422 78 3 10 chr10 120499824 120500133 -25089155 + AluSp SINE Alu 1 307 -6 262 206 32 87 chr10 120500133 120500205 -25089083 - L1ME4a LINE L1 -55 6066 6002 257 238 82 57 chr10 120500319 120500441 -25088847 - MLT1J2 LTR MaLR -153 297 173 374 261 116 86 chr10 120500705 120501008 -25088280 + L1ME4a LINE L1 5602 5913 -208 1676 245 40 42 chr10 120501636 120502179 -25087109 - MLT1F LTR MaLR 0 542 1 434 292 115 5 chr10 120502620 120502812 -25086476 - L2 LINE L2 -530 2784 2572 558 122 0 0 chr10 120502955 120503062 -25086226 + (TC)n Simple_repeat Simple_repeat 1 107 0 342 321 51 51 chr10 120503123 120503397 -25085891 - L2 LINE L2 -925 2389 2116 367 264 0 0 chr10 120503506 120503578 -25085710 + MIR SINE MIR 82 153 -55 28 29 0 0 chr10 120504565 120504600 -25084688 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr10 120504908 120504930 -25084358 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr10 120505002 120505024 -25084264 + AT_rich Low_complexity Low_complexity 1 22 0 293 362 132 11 chr10 120505724 120505898 -25083390 - L2 LINE L2 0 3272 3078 2153 106 17 0 chr10 120505966 120506259 -25083029 + AluSg SINE Alu 1 298 -12 2355 97 0 3 chr10 120507113 120507411 -25081877 + AluSg SINE Alu 1 297 -13 3620 156 74 1 chr10 120507520 120508225 -25081063 + Tigger2 DNA MER2_type 2 757 -1961 1059 96 112 84 chr10 120508279 120508529 -25080759 + Tigger2 DNA MER2_type 2461 2717 -1 569 293 39 11 chr10 120508669 120508850 -25080438 + MIR SINE MIR 75 260 -2 318 182 284 0 chr10 120509368 120509456 -25079832 + MIR SINE MIR 28 140 -68 260 276 23 26 chr10 120509509 120509593 -25079695 + MER5A DNA MER1_type 63 140 -38 1944 127 44 41 chr10 120510009 120510371 -25078917 + THE1B LTR MaLR 1 363 -1 11348 95 9 11 chr10 120510372 120511646 -25077642 + THE1B-int LTR MaLR 1 1273 -307 2614 40 0 0 chr10 120511646 120511946 -25077342 + AluY SINE Alu 1 300 -11 11348 95 9 11 chr10 120511946 120512254 -25077034 + THE1B-int LTR MaLR 1273 1580 0 2057 113 68 37 chr10 120512254 120512547 -25076741 + THE1B LTR MaLR 1 308 -56 2166 113 7 7 chr10 120512547 120512848 -25076440 - AluSx SINE Alu -6 306 6 2057 113 68 37 chr10 120512848 120512907 -25076381 + THE1B LTR MaLR 308 364 0 235 207 184 0 chr10 120512934 120513021 -25076267 + L1MC4a LINE L1 5493 5595 -526 1371 187 36 6 chr10 120513031 120513363 -25075925 + L1M3 LINE L1 4821 5162 -984 487 170 85 9 chr10 120513360 120513466 -25075822 + L1M3 LINE L1 5494 5607 -573 * 454 303 27 16 chr10 120513515 120513703 -25075585 + L1MC4a LINE L1 5712 5901 -1907 1614 166 36 23 chr10 120513838 120514139 -25075149 - AluJb SINE Alu -7 305 1 1605 136 136 30 chr10 120514354 120514655 -25074633 + MER1B DNA MER1_type 1 333 -4 302 271 130 42 chr10 120515802 120515994 -25073294 + L1ME LINE L1 5521 5729 -392 2180 95 0 64 chr10 120516473 120516651 -25072637 - AluSg SINE Alu -3 307 158 2310 77 0 7 chr10 120516651 120516951 -25072337 - AluY SINE Alu -10 301 4 2180 95 0 64 chr10 120516951 120517099 -25072189 - AluSg SINE Alu -152 158 2 293 300 90 0 chr10 120517667 120517767 -25071521 + MIR3 SINE MIR 15 123 -85 405 233 12 0 chr10 120519416 120519502 -25069786 - AluJ/FLAM SINE Alu -225 87 1 597 240 29 6 chr10 120519525 120519696 -25069592 - MER5B DNA MER1_type -3 175 1 280 235 157 39 chr10 120519723 120519825 -25069463 + L2 LINE L2 3200 3313 0 2040 129 0 14 chr10 120521229 120521524 -25067764 + AluSx SINE Alu 1 291 -21 2079 95 23 30 chr10 120521526 120521831 -25067457 + AluSg SINE Alu 1 303 -7 333 243 84 47 chr10 120522969 120523076 -25066212 + MIR3 SINE MIR 82 192 -16 544 310 6 35 chr10 120523783 120523954 -25065334 - MIR3 SINE MIR -10 198 33 742 192 0 0 chr10 120523984 120524114 -25065174 + AluJ SINE Alu 1 130 -172 1849 89 0 146 chr10 120524120 120524470 -25064818 + AluSp SINE Alu 1 299 -4 912 154 12 19 chr10 120524472 120524634 -25064654 + AluJ SINE Alu 135 295 -17 2099 236 56 75 chr10 120525690 120525763 -25063525 - L1ME3A LINE L1 -5 6234 6161 446 33 17 0 chr10 120525763 120525823 -25063465 + (TA)n Simple_repeat Simple_repeat 2 62 0 2099 236 56 75 chr10 120525823 120526673 -25062615 - L1ME3A LINE L1 -78 6161 5328 1270 154 70 0 chr10 120526899 120527100 -25062188 + AluJb SINE Alu 85 299 -13 247 235 47 12 chr10 120527232 120527317 -25061971 - L1ME3A LINE L1 -4750 1646 1559 255 177 0 0 chr10 120527514 120527576 -25061712 + CT-rich Low_complexity Low_complexity 1 62 0 2368 100 0 0 chr10 120527579 120527879 -25061409 - AluSx SINE Alu -12 300 1 362 270 99 9 chr10 120527879 120527990 -25061298 - L1ME3A LINE L1 -5031 1174 1054 516 271 49 0 chr10 120528122 120528266 -25061022 - L1ME3A LINE L1 -5549 656 506 1914 120 32 3 chr10 120528288 120528572 -25060716 - AluSc SINE Alu -17 292 1 1151 171 21 2 chr10 120530364 120530639 -25058649 - MER2 DNA MER2_type 0 345 1 1888 153 3 3 chr10 120530834 120531128 -25058160 + AluJb SINE Alu 1 294 -18 24 0 0 0 chr10 120532475 120532499 -25056789 + AT_rich Low_complexity Low_complexity 1 24 0 427 211 122 0 chr10 120533331 120533454 -25055834 + L1MB1 LINE L1 6031 6168 0 2319 78 0 13 chr10 120534096 120534402 -25054886 - AluY SINE Alu -9 302 1 454 224 93 50 chr10 120535107 120535171 -25054117 + MIR SINE MIR 52 112 -150 2511 71 0 0 chr10 120535171 120535479 -25053809 - AluY SINE Alu -3 308 1 454 224 93 50 chr10 120535479 120535575 -25053713 + MIR SINE MIR 112 219 -43 317 376 34 13 chr10 120538749 120538898 -25050390 - L2 LINE L2 -4 3268 3117 411 328 8 8 chr10 120538977 120539105 -25050183 - MIR SINE MIR -4 258 131 23 33 0 0 chr10 120539199 120539229 -25050059 + AT_rich Low_complexity Low_complexity 1 30 0 2375 76 0 3 chr10 120539229 120539518 -25049770 - AluY SINE Alu -23 288 1 428 149 0 0 chr10 120539521 120539595 -25049693 - L1MC4 LINE L1 -454 7588 7515 2081 103 10 7 chr10 120540078 120540370 -25048918 - AluSg SINE Alu -17 293 1 1755 152 0 32 chr10 120540389 120540672 -25048616 - AluJb SINE Alu -38 274 1 546 218 129 10 chr10 120540881 120541074 -25048214 - MER112 DNA MER1_type 0 260 45 473 153 0 0 chr10 120541439 120541511 -25047777 + AluJ/FLAM SINE Alu 1 72 -240 2246 115 0 10 chr10 120541511 120541815 -25047473 + AluSg SINE Alu 1 301 -9 2022 139 3 10 chr10 120542799 120543101 -25046187 + AluJb SINE Alu 1 300 -12 1788 160 7 11 chr10 120543779 120544060 -25045228 + AluJb SINE Alu 11 290 -22 266 47 47 0 chr10 120544296 120544339 -25044949 + AluSc SINE Alu 91 135 -164 1673 81 50 0 chr10 120544339 120544560 -25044728 - AluY SINE Alu -79 232 1 580 274 48 73 chr10 120545110 120545358 -25043930 + MIR SINE MIR 21 262 0 228 35 0 0 chr10 120545481 120545510 -25043778 + (CA)n Simple_repeat Simple_repeat 1 29 0 2309 72 0 3 chr10 120546239 120546530 -25042758 + AluY SINE Alu 1 290 -21 2385 66 0 25 chr10 120546542 120546859 -25042429 + AluY SINE Alu 1 309 -2 191 36 36 0 chr10 120547499 120547527 -25041761 + (GAA)n Simple_repeat Simple_repeat 2 30 0 230 289 46 92 chr10 120548423 120548575 -25040713 + MIR SINE MIR 1 145 -117 292 291 172 20 chr10 120548603 120548754 -25040534 + MER5B DNA MER1_type 3 176 -2 24 0 0 0 chr10 120548867 120548891 -25040397 + AT_rich Low_complexity Low_complexity 1 24 0 456 274 260 5 chr10 120549067 120549271 -25040017 - MIR SINE MIR 0 262 7 434 311 11 53 chr10 120549382 120549572 -25039716 + MER5A DNA MER1_type 8 189 0 318 208 0 0 chr10 120550139 120550218 -25039070 - L1ME1 LINE L1 -1 6177 6095 857 196 224 37 chr10 120550252 120550578 -25038710 - L1ME2 LINE L1 -56 6108 5722 1483 65 90 0 chr10 120551335 120551536 -25037752 + L1PA10 LINE L1 5939 6157 -11 24 0 0 0 chr10 120551536 120551560 -25037728 + AT_rich Low_complexity Low_complexity 1 24 0 653 197 0 138 chr10 120552380 120552598 -25036690 + MIR SINE MIR 74 261 -1 23 0 0 0 chr10 120552611 120552634 -25036654 + AT_rich Low_complexity Low_complexity 1 23 0 373 253 189 58 chr10 120553390 120553580 -25035708 + MIR SINE MIR 12 226 -36 1798 117 23 23 chr10 120553662 120553926 -25035362 + AluSg SINE Alu 32 295 -15 3412 132 36 3 chr10 120554860 120555437 -25033851 + L1MB2 LINE L1 5572 6167 -4 23 0 0 0 chr10 120555438 120555461 -25033827 + AT_rich Low_complexity Low_complexity 1 23 0 513 47 0 0 chr10 120555544 120555608 -25033680 + (TTTTA)n Simple_repeat Simple_repeat 3 66 0 1815 146 15 0 chr10 120555613 120555887 -25033401 - AluJb SINE Alu -34 278 1 2214 140 62 15 chr10 120556290 120556690 -25032598 + MLT1C LTR MaLR 3 421 -46 2084 125 0 0 chr10 120556866 120557175 -25032113 - AluSx SINE Alu 0 309 1 5544 81 13 8 chr10 120557227 120558362 -25030926 - L1PB1 LINE L1 0 6151 5020 3048 191 3 0 chr10 120558379 120559034 -25030254 + L1PB1 LINE L1 4362 5018 -1128 1013 147 0 0 chr10 120559118 120559268 -25030020 + AluSq/x SINE Alu 1 150 -162 227 295 71 9 chr10 120559290 120559402 -25029886 - L1ME2 LINE L1 -2107 5701 5583 474 261 85 13 chr10 120559406 120559559 -25029729 + MIR SINE MIR 25 188 -74 201 313 70 47 chr10 120559677 120559805 -25029483 - L2 LINE L2 -1 3271 3141 311 344 95 0 chr10 120560780 120560969 -25028319 + L2 LINE L2 2545 2751 -563 772 223 17 43 chr10 120561132 120561365 -25027923 + L1ME3A LINE L1 5944 6170 0 322 291 128 44 chr10 120561418 120561621 -25027667 + L2 LINE L2 2840 3059 -213 283 215 15 15 chr10 120561807 120561872 -25027416 - Charlie4a DNA MER1_type 0 508 444 2058 118 7 0 chr10 120561874 120562163 -25027125 - AluSq SINE Alu -20 293 3 744 129 9 0 chr10 120562183 120562299 -25026989 - AluSg/x SINE Alu -6 303 187 1415 213 119 5 chr10 120562320 120562724 -25026564 - L1ME3A LINE L1 -38 6132 5683 1453 196 99 5 chr10 120562737 120563150 -25026138 - Charlie4a DNA MER1_type -55 453 2 230 352 102 19 chr10 120563153 120563261 -25026027 + L2 LINE L2 3150 3266 -6 614 285 104 0 chr10 120563275 120563468 -25025820 - MIR SINE MIR -1 261 49 204 231 0 19 chr10 120564303 120564355 -25024933 + T-rich Low_complexity Low_complexity 4 54 0 294 293 24 12 chr10 120565264 120565346 -25023942 + MIR3 SINE MIR 105 187 -21 279 0 0 0 chr10 120566460 120566491 -25022797 + (GA)n Simple_repeat Simple_repeat 1 31 0 * 315 0 0 0 chr10 120566490 120566525 -25022763 + (TG)n Simple_repeat Simple_repeat 1 35 0 1022 90 15 0 chr10 120566667 120566801 -25022487 - AluSq/x SINE Alu -176 136 1 242 253 40 40 chr10 120566801 120566900 -25022388 - L1ME LINE L1 -333 5829 5731 420 281 25 16 chr10 120567178 120567299 -25021989 + MIR3 SINE MIR 75 196 -12 218 366 12 0 chr10 120568230 120568312 -25020976 - L2 LINE L2 -5 3267 3185 24 0 0 0 chr10 120568400 120568424 -25020864 + AT_rich Low_complexity Low_complexity 1 24 0 1853 65 0 0 chr10 120570278 120570507 -25018781 + AluY SINE Alu 81 309 -2 295 311 0 57 chr10 120571538 120571660 -25017628 + MIR3 SINE MIR 88 202 -6 2287 98 3 3 chr10 120572788 120573094 -25016194 + AluSp SINE Alu 1 306 -7 2189 117 0 3 chr10 120573094 120573394 -25015894 + AluSc SINE Alu 1 299 -10 1836 151 107 21 chr10 120573400 120573784 -25015504 + MSTA LTR MaLR 1 417 -11 2090 136 0 16 chr10 120573986 120574296 -25014992 - AluSx SINE Alu -7 305 1 1527 180 78 56 chr10 120574756 120575206 -25014082 - MLT1C LTR MaLR 0 467 8 25 0 0 0 chr10 120576126 120576151 -25013137 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr10 120576221 120576242 -25013046 + AT_rich Low_complexity Low_complexity 1 21 0 294 118 15 29 chr10 120576639 120576707 -25012581 + (TA)n Simple_repeat Simple_repeat 1 67 0 2157 128 0 10 chr10 120577177 120577481 -25011807 - AluSx SINE Alu -11 301 1 23 33 0 0 chr10 120577604 120577634 -25011654 + AT_rich Low_complexity Low_complexity 1 30 0 4738 159 60 11 chr10 120578341 120579688 -25009600 + L1PA16 LINE L1 4739 6151 -15 29 0 0 0 chr10 120579714 120579743 -25009545 + AT_rich Low_complexity Low_complexity 1 29 0 235 188 78 16 chr10 120579758 120579822 -25009466 + MIR SINE MIR 118 185 -77 2027 139 4 0 chr10 120579838 120580119 -25009169 - AluSx SINE Alu -30 282 1 575 119 127 34 chr10 120580815 120580933 -25008355 - MER44D DNA MER2_type -210 399 1 2040 172 62 31 chr10 120582161 120582643 -25006645 - L1MB7 LINE L1 0 6184 5688 1827 215 50 7 chr10 120582641 120583097 -25006191 + L1MD1 LINE L1 5717 6192 -50 * 24 0 0 0 chr10 120583098 120583122 -25006166 + AT_rich Low_complexity Low_complexity 1 24 0 494 228 4 1 chr10 120583648 120583762 -25005526 - MLT1H LTR MaLR -375 174 34 9277 144 23 3 chr10 120684339 120686465 -24902823 - L1PA14 LINE L1 -311 5850 3684 238 303 0 38 chr10 120686595 120686780 -24902508 + G-rich Low_complexity Low_complexity 2 179 0 808 191 0 0 chr10 120688292 120688423 -24900865 + FLAM_C SINE Alu 1 131 -2 261 304 68 78 chr10 120689232 120689423 -24899865 + MIR3 SINE MIR 19 207 -1 2018 134 0 0 chr10 120690439 120690716 -24898572 + AluSx SINE Alu 1 277 -35 23 0 0 0 chr10 120690940 120690963 -24898325 + AT_rich Low_complexity Low_complexity 1 23 0 363 322 0 8 chr10 120691201 120691322 -24897966 + L2 LINE L2 2525 2644 -670 2203 84 28 0 chr10 120691330 120691614 -24897674 - AluY SINE Alu -19 292 1 469 348 90 31 chr10 120691635 120692023 -24897265 + L2 LINE L2 2883 3293 -20 21 0 0 0 chr10 120693860 120693881 -24895407 + AT_rich Low_complexity Low_complexity 1 21 0 615 258 10 26 chr10 120694311 120694505 -24894783 - HAL1 LINE L1 -6 2501 2311 2266 91 0 3 chr10 120694760 120695075 -24894213 + AluY SINE Alu 1 314 0 2024 129 7 0 chr10 120695083 120695369 -24893919 + AluSg SINE Alu 1 288 -22 4194 191 90 59 chr10 120695369 120695817 -24893471 - L1M4 LINE L1 -1086 5060 4627 1847 158 0 17 chr10 120695817 120696115 -24893173 - AluJb SINE Alu -19 293 1 4194 191 90 59 chr10 120696115 120696905 -24892383 - L1M4 LINE L1 -1519 4627 3784 589 246 41 73 chr10 120696917 120697137 -24892151 - MER21A LTR ERV1 -148 783 571 815 199 7 7 chr10 120697145 120697296 -24891992 - FRAM SINE Alu -26 150 1 1059 248 42 92 chr10 120697296 120697780 -24891508 - MER21B LTR ERV1 -73 532 34 2756 212 64 49 chr10 120697782 120698463 -24890825 - L1M4 LINE L1 -2367 3779 3077 890 203 120 0 chr10 120698463 120698655 -24890633 - MER20 DNA MER1_type -4 215 1 2756 212 64 49 chr10 120698655 120698988 -24890300 - L1M4 LINE L1 -3069 3077 2750 1826 203 100 61 chr10 120699124 120699682 -24889606 - L1ME3A LINE L1 0 6170 5591 562 282 85 27 chr10 120701150 120701386 -24887902 - MIR SINE MIR 0 262 15 696 254 127 0 chr10 120703115 120703280 -24886008 - MIR SINE MIR -75 187 2 260 268 106 65 chr10 120703290 120703413 -24885875 + MIR SINE MIR 13 140 -122 28 29 0 0 chr10 120703604 120703639 -24885649 + AT_rich Low_complexity Low_complexity 1 35 0 237 108 0 0 chr10 120704587 120704624 -24884664 + (TTCA)n Simple_repeat Simple_repeat 1 37 0 460 342 116 23 chr10 120704963 120705264 -24884024 - L2 LINE L2 -497 2817 2489 1782 132 24 34 chr10 120705394 120705689 -24883599 + AluJo SINE Alu 1 292 -20 234 224 132 26 chr10 120705953 120706029 -24883259 + L2 LINE L2 3178 3261 -52 3909 29 0 0 chr10 120706491 120706968 -24882320 - L1PA4 LINE L1 -743 5403 4927 6208 36 5 0 chr10 120706968 120707708 -24881580 + L1PA4 LINE L1 5404 6154 -1 1137 159 11 0 chr10 120708773 120708949 -24880339 + AluSg/x SINE Alu 123 300 -12 352 259 166 0 chr10 120708960 120709099 -24880189 - MER112 DNA MER1_type -7 253 92 2038 147 7 3 chr10 120709903 120710203 -24879085 + AluSx SINE Alu 1 301 -11 237 65 0 0 chr10 120710365 120710396 -24878892 + (A)n Simple_repeat Simple_repeat 1 31 0 319 266 166 0 chr10 120710859 120710998 -24878290 - MER112 DNA MER1_type -7 253 92 623 293 271 7 chr10 120711619 120712092 -24877196 + L2 LINE L2 2690 3313 0 275 211 0 0 chr10 120712690 120712747 -24876541 + L1M4 LINE L1 5036 5092 -1054 1073 242 20 4 chr10 120713191 120713443 -24875845 + L1M4 LINE L1 3979 4234 -1912 8860 121 60 16 chr10 120713448 120714903 -24874385 + Tigger1 DNA MER2_type 24 1541 -877 3341 202 29 17 chr10 120714904 120715673 -24873615 + L1M4 LINE L1 4377 5154 -992 2323 113 3 0 chr10 120715676 120715987 -24873301 + AluSx SINE Alu 1 312 0 515 168 63 0 chr10 120715987 120716082 -24873206 + L1M4 LINE L1 5368 5468 -710 2126 116 7 10 chr10 120716655 120716958 -24872330 - AluSq SINE Alu -4 309 8 194 0 39 0 chr10 120717213 120717239 -24872049 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 370 375 33 7 chr10 120719510 120719662 -24869626 + MIR3 SINE MIR 24 179 -29 378 0 0 0 chr10 120719771 120719813 -24869475 + (TG)n Simple_repeat Simple_repeat 2 43 0 206 283 100 0 chr10 120720873 120720933 -24868355 + MIR3 SINE MIR 116 181 -27 461 254 102 17 chr10 120721191 120721437 -24867851 + L1ME4a LINE L1 5666 5938 -183 1790 155 31 3 chr10 120721452 120721742 -24867546 - MER2 DNA MER2_type 0 345 48 273 282 206 15 chr10 120722044 120722175 -24867113 - MIR3 SINE MIR -23 185 30 216 241 165 25 chr10 120722364 120722443 -24866845 + L2 LINE L2 3191 3280 -33 2195 81 35 0 chr10 120723723 120724006 -24865282 - AluSg SINE Alu -14 296 4 2372 94 0 7 chr10 120725454 120725762 -24863526 - AluSg SINE Alu -4 306 1 22 0 0 0 chr10 120729785 120729807 -24859481 + AT_rich Low_complexity Low_complexity 1 22 0 2093 114 7 13 chr10 120730162 120730460 -24858828 + AluSx SINE Alu 1 296 -16 265 352 48 16 chr10 120730851 120730976 -24858312 - L2 LINE L2 -252 3061 2933 1413 124 49 4 chr10 120731478 120731704 -24857584 + MER46A DNA MER2_type 1 236 0 32 0 0 0 chr10 120732034 120732066 -24857222 + AT_rich Low_complexity Low_complexity 1 32 0 2309 98 0 0 chr10 120732396 120732701 -24856587 - AluY SINE Alu -6 305 1 2315 93 7 0 chr10 120734227 120734529 -24854759 - AluSx SINE Alu -8 304 1 2024 143 16 0 chr10 120736189 120736496 -24852792 - AluSx SINE Alu 0 312 1 338 213 0 0 chr10 120737928 120738003 -24851285 - MER116 DNA Mariner -5 75 1 243 0 0 0 chr10 120738056 120738083 -24851205 + (TG)n Simple_repeat Simple_repeat 1 27 0 25 31 0 0 chr10 120739082 120739114 -24850174 + AT_rich Low_complexity Low_complexity 1 32 0 33 0 0 0 chr10 120739628 120739661 -24849627 + AT_rich Low_complexity Low_complexity 1 33 0 738 182 6 66 chr10 120739661 120739759 -24849529 - L1MC4a LINE L1 -350 7458 7374 2427 77 0 0 chr10 120739759 120740057 -24849231 + AluY SINE Alu 7 304 -7 738 182 6 66 chr10 120740057 120740139 -24849149 - L1MC4a LINE L1 -434 7374 7289 810 213 100 60 chr10 120740464 120740863 -24848425 - L1MC5 LINE L1 -48 7913 7499 906 219 46 114 chr10 120741029 120741675 -24847613 - L1MC5 LINE L1 -516 7445 6873 21 0 0 0 chr10 120742177 120742198 -24847090 + AT_rich Low_complexity Low_complexity 1 21 0 702 121 57 32 chr10 120742201 120742325 -24846963 - AluJo SINE Alu -178 134 8 1916 103 60 14 chr10 120742619 120742901 -24846387 - AluSg SINE Alu -15 295 1 1736 154 3 48 chr10 120743134 120743446 -24845842 - AluJb SINE Alu -13 299 2 225 0 0 0 chr10 120744439 120744464 -24844824 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 22 0 0 0 chr10 120744873 120744895 -24844393 + AT_rich Low_complexity Low_complexity 1 22 0 2019 106 7 27 chr10 120747138 120747431 -24841857 + AluSx SINE Alu 1 287 -25 249 239 172 52 chr10 120747693 120747827 -24841461 + MIR SINE MIR 57 206 -56 1912 134 4 4 chr10 120748062 120748338 -24840950 - AluSx SINE Alu -36 276 1 21 57 0 0 chr10 120750213 120750248 -24839040 + AT_rich Low_complexity Low_complexity 1 35 0 300 256 124 47 chr10 120750981 120751110 -24838178 - MIR SINE MIR -116 146 8 23 0 0 0 chr10 120752118 120752141 -24837147 + AT_rich Low_complexity Low_complexity 1 23 0 23 68 0 0 chr10 120753683 120753727 -24835561 + AT_rich Low_complexity Low_complexity 1 44 0 2039 142 0 20 chr10 120754993 120755296 -24833992 - AluSx SINE Alu -15 297 1 207 321 145 8 chr10 120755893 120756024 -24833264 + L2 LINE L2 2497 2645 -669 198 250 73 0 chr10 120756086 120756154 -24833134 + L2 LINE L2 2788 2860 -454 373 257 177 6 chr10 120756217 120756392 -24832896 - MIR SINE MIR -10 252 48 219 293 35 0 chr10 120756427 120756485 -24832803 + L2 LINE L2 2994 3053 -219 2188 127 7 0 chr10 120757343 120757642 -24831646 - AluSx SINE Alu -10 302 2 281 227 277 14 chr10 120758223 120758364 -24830924 - MIR SINE MIR -42 220 43 749 196 35 0 chr10 120760930 120761073 -24828215 - MER3 DNA MER1_type -61 148 1 183 80 0 0 chr10 120764171 120764196 -24825092 + (CAG)n Simple_repeat Simple_repeat 3 27 0 557 165 182 8 chr10 120764485 120764606 -24824682 + MER5A DNA MER1_type 48 189 0 704 127 0 0 chr10 120764649 120764759 -24824529 - FLAM_C SINE Alu -32 111 2 24 67 0 0 chr10 120765119 120765164 -24824124 + AT_rich Low_complexity Low_complexity 1 45 0 1781 80 8 36 chr10 120765267 120765352 -24823936 + AluSp SINE Alu 56 142 -171 189 0 0 0 chr10 120765352 120765373 -24823915 + (CAA)n Simple_repeat Simple_repeat 1 21 0 1781 80 8 36 chr10 120765373 120765537 -24823751 + AluSp SINE Alu 142 298 -15 255 204 74 0 chr10 120766100 120766154 -24823134 - MIR SINE MIR -30 232 175 644 161 71 71 chr10 120766467 120766602 -24822686 + FAM SINE Alu 1 30 -155 2151 116 0 7 chr10 120766602 120766894 -24822394 - AluSx SINE Alu -22 290 1 644 161 71 71 chr10 120766894 120766913 -24822375 + FAM SINE Alu 29 47 -2 2008 125 3 26 chr10 120766996 120767299 -24821989 - AluJb SINE Alu -6 306 11 2185 108 0 3 chr10 120767881 120768206 -24821082 - AluSx SINE Alu 0 324 1 2321 81 7 13 chr10 120768217 120768515 -24820773 - AluSg SINE Alu -14 296 1 1690 250 78 96 chr10 120768879 120769987 -24819301 + L1MC4 LINE L1 6729 7816 -226 838 249 158 66 chr10 120771350 120771760 -24817528 - LTR16A LTR ERVL -2 448 1 196 51 26 26 chr10 120772715 120772754 -24816534 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1768 92 66 52 chr10 120772758 120773029 -24816259 - AluSx SINE Alu -33 279 5 24 77 0 0 chr10 120774221 120774273 -24815015 + GC_rich Low_complexity Low_complexity 1 52 0 534 306 43 21 chr10 120776662 120776897 -24812391 + MIR SINE MIR 10 249 -13 190 209 0 0 chr10 120777408 120777451 -24811837 - L2 LINE L2 0 3313 3271 897 253 41 4 chr10 120777991 120778236 -24811052 - MIR SINE MIR 0 262 9 375 236 34 0 chr10 120778243 120778332 -24810956 - MIR SINE MIR -63 145 54 2367 110 0 0 chr10 120779121 120779429 -24809859 - AluSg SINE Alu -2 308 1 300 281 70 8 chr10 120779461 120779589 -24809699 - MIR3 SINE MIR -12 196 61 228 220 211 64 chr10 120780420 120780529 -24808759 - L2 LINE L2 0 3313 3189 2084 126 7 3 chr10 120780755 120781057 -24808231 - AluJo SINE Alu -9 303 1 470 261 106 11 chr10 120781986 120782166 -24807122 - MIR SINE MIR -16 246 50 2604 51 0 0 chr10 120782258 120782553 -24806735 + AluY SINE Alu 1 295 -16 2423 92 0 0 chr10 120783109 120783414 -24805874 + AluSx SINE Alu 3 307 -5 258 245 20 59 chr10 120783417 120783519 -24805769 + L2 LINE L2 2702 2799 -515 483 254 8 16 chr10 120783807 120783929 -24805359 + L2 LINE L2 3191 3311 -2 473 276 58 29 chr10 120783984 120784158 -24805130 - MER20B DNA MER1_type -604 179 1 317 205 255 0 chr10 120784211 120784347 -24804941 + MIR SINE MIR 26 196 -63 308 340 97 12 chr10 120784813 120785060 -24804228 + L1M4 LINE L1 3658 3925 -2221 375 200 19 57 chr10 120785313 120785418 -24803870 + MIR SINE MIR 46 146 -116 1709 105 42 0 chr10 120787425 120787699 -24801589 + AluSg SINE Alu 35 318 0 183 129 0 0 chr10 120788081 120788112 -24801176 + (A)n Simple_repeat Simple_repeat 1 31 0 1214 140 0 65 chr10 120788426 120788655 -24800633 + MER20 DNA MER1_type 6 219 0 2555 55 0 22 chr10 120788725 120789037 -24800251 - AluSx SINE Alu -7 305 1 221 244 61 37 chr10 120789205 120789287 -24800001 + L2 LINE L2 3164 3247 -25 270 257 147 9 chr10 120789297 120789406 -24799882 - MIR SINE MIR -108 154 31 227 208 21 0 chr10 120789602 120789650 -24799638 - MIR SINE MIR -100 162 114 240 276 0 0 chr10 120790046 120790173 -24799115 + T-rich Low_complexity Low_complexity 1 127 0 1142 148 12 0 chr10 120790397 120790566 -24798722 + FAM SINE Alu 1 171 -4 730 176 163 19 chr10 120790590 120790978 -24798310 + LTR54B LTR ERV1 1 490 -8 818 170 113 0 chr10 120791561 120791715 -24797573 - MER21B LTR ERV1 -11 852 681 1094 145 12 0 chr10 120791715 120791881 -24797407 - LTR39 LTR ERV1 0 783 616 2210 107 7 0 chr10 120791881 120792181 -24797107 - AluSx SINE Alu -9 303 2 646 180 172 8 chr10 120792181 120792303 -24796985 - AluJo SINE Alu -167 145 4 258 304 10 20 chr10 120792334 120792436 -24796852 + MER5B DNA MER1_type 78 178 0 1399 165 131 15 chr10 120792952 120793203 -24796085 + AluJo SINE Alu 1 286 -16 351 0 0 0 chr10 120793203 120793242 -24796046 + (CAAT)n Simple_repeat Simple_repeat 2 40 0 1399 165 131 15 chr10 120793242 120793257 -24796031 + AluJo SINE Alu 286 298 -4 236 296 80 35 chr10 120793409 120793608 -24795680 - L2 LINE L2 -1409 1905 1698 246 105 0 0 chr10 120793757 120793795 -24795493 + (GA)n Simple_repeat Simple_repeat 2 39 0 213 323 189 0 chr10 120794137 120794264 -24795024 - MIR SINE MIR 0 262 112 558 234 136 7 chr10 120794612 120794766 -24794522 - MIR SINE MIR -65 197 24 213 121 0 0 chr10 120795751 120795784 -24793504 + (CA)n Simple_repeat Simple_repeat 1 33 0 180 111 0 0 chr10 120796652 120796679 -24792609 + (A)n Simple_repeat Simple_repeat 1 27 0 218 246 0 0 chr10 120797165 120797226 -24792062 + G-rich Low_complexity Low_complexity 4 64 0 201 232 0 0 chr10 120797430 120797486 -24791802 + (TG)n Simple_repeat Simple_repeat 1 56 0 215 276 0 0 chr10 120797762 120797820 -24791468 + MIR SINE MIR 204 261 -1 205 250 0 0 chr10 120797905 120797957 -24791331 + (CA)n Simple_repeat Simple_repeat 2 53 0 464 198 0 10 chr10 120798371 120798472 -24790816 + MIR SINE MIR 50 149 -113 2369 77 3 0 chr10 120798810 120799110 -24790178 + AluSx SINE Alu 1 301 -11 230 286 48 67 chr10 120801397 120801502 -24787786 + L2 LINE L2 3146 3248 -24 204 338 0 0 chr10 120802171 120802251 -24787037 + MIR SINE MIR 74 153 -109 2316 95 0 7 chr10 120802313 120802608 -24786680 + AluSg SINE Alu 1 293 -17 262 327 65 9 chr10 120802701 120802808 -24786480 + MIR SINE MIR 36 148 -60 368 268 27 9 chr10 120803421 120803533 -24785755 - L2 LINE L2 -1 3312 3199 1633 132 105 4 chr10 120803806 120804083 -24785205 + AluSq SINE Alu 1 303 0 15343 118 27 24 chr10 120804648 120806847 -24782441 + Tigger1 DNA MER2_type 1 2209 -209 1920 154 20 0 chr10 120806847 120807208 -24782080 - AluSx SINE Alu 0 312 1 15343 118 27 24 chr10 120807208 120807416 -24781872 + Tigger1 DNA MER2_type 2209 2415 -3 395 326 30 0 chr10 120807447 120807579 -24781709 - MIR SINE MIR -71 191 56 455 268 92 30 chr10 120808166 120808208 -24781080 + MER5B DNA MER1_type 5 43 -135 883 157 32 16 chr10 120808208 120808393 -24780895 + MER53 DNA DNA 1 188 -1 455 268 92 30 chr10 120808393 120808514 -24780774 + MER5B DNA MER1_type 43 178 0 880 269 8 34 chr10 120808929 120809193 -24780095 + MIR SINE MIR 6 262 0 1676 155 47 22 chr10 120809440 120809592 -24779696 - AluJo SINE Alu -28 284 137 378 0 0 0 chr10 120809592 120809634 -24779654 + (CA)n Simple_repeat Simple_repeat 2 43 0 216 0 0 0 chr10 120809635 120809659 -24779629 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 1676 155 47 22 chr10 120809659 120809781 -24779507 - AluJo SINE Alu -174 138 1 332 276 59 9 chr10 120809829 120809955 -24779333 + MIR3 SINE MIR 35 167 -41 2570 55 0 7 chr10 120810176 120810483 -24778805 - AluY SINE Alu -6 305 1 6133 194 72 55 chr10 120811794 120812677 -24776611 + L1MD1 LINE L1 2 869 -5671 1532 118 12 99 chr10 120812677 120812724 -24776564 + L1MA8 LINE L1 5995 6045 -246 2064 135 0 0 chr10 120812724 120813013 -24776275 + AluSx SINE Alu 3 291 -21 1532 118 12 99 chr10 120813013 120813287 -24776001 + L1MA8 LINE L1 6045 6288 -3 6133 194 72 55 chr10 120813287 120814726 -24774562 + L1MD1 LINE L1 869 2682 -3858 2090 151 0 0 chr10 120814726 120815030 -24774258 + AluJb SINE Alu 1 304 -8 6133 194 72 55 chr10 120815030 120815993 -24773295 + L1MD1 LINE L1 2682 3628 -2912 1045 248 15 6 chr10 120816007 120816334 -24772954 + L1MD1 LINE L1 4802 5131 -1409 212 139 0 23 chr10 120816354 120816371 -24772917 + (TATATG)n Simple_repeat Simple_repeat 3 19 -25 1993 148 48 0 chr10 120816371 120816701 -24772587 - MER7A DNA MER2_type -1 345 2 212 139 0 23 chr10 120816701 120816726 -24772562 + (TATATG)n Simple_repeat Simple_repeat 19 44 0 2461 58 0 52 chr10 120816847 120817173 -24772115 + AluY SINE Alu 1 309 -2 1804 154 25 0 chr10 120817194 120817508 -24771780 + AluSx SINE Alu 1 321 0 4599 170 39 73 chr10 120817533 120818446 -24770842 + L1MD1 LINE L1 5149 6091 -545 2221 73 10 33 chr10 120818446 120818749 -24770539 - AluY SINE Alu -15 296 1 4599 170 39 73 chr10 120818749 120819093 -24770195 + L1MD1 LINE L1 6091 6333 -303 4573 60 2 0 chr10 120819093 120819662 -24769626 + L1PA8 LINE L1 5600 6171 -1 4599 170 39 73 chr10 120819662 120819889 -24769399 + L1MD1 LINE L1 6333 6566 -70 267 31 0 0 chr10 120820302 120820334 -24768954 + (CA)n Simple_repeat Simple_repeat 2 33 0 2448 83 3 3 chr10 120820858 120821171 -24768117 + AluSq SINE Alu 1 313 0 1213 269 63 20 chr10 120821420 120821862 -24767426 - L1ME4a LINE L1 -168 5953 5493 2141 141 0 0 chr10 120821988 120822292 -24766996 - AluSx SINE Alu -8 304 1 795 252 59 5 chr10 120823007 120823229 -24766059 - MIR SINE MIR -19 243 10 438 263 50 12 chr10 120823264 120823424 -24765864 - MIR SINE MIR -8 254 89 721 184 0 0 chr10 120824177 120824291 -24764997 - FLAM_A SINE Alu -18 124 11 28 29 0 0 chr10 120824301 120824336 -24764952 + AT_rich Low_complexity Low_complexity 1 35 0 809 97 0 0 chr10 120824565 120824668 -24764620 - AluSg/x SINE Alu -11 298 196 2300 98 0 0 chr10 120824917 120825202 -24764086 - AluSx SINE Alu -25 287 3 1841 176 0 7 chr10 120825211 120825513 -24763775 - AluJb SINE Alu -12 300 1 254 205 77 77 chr10 120825531 120825648 -24763640 + MIR3 SINE MIR 14 130 -78 23 68 0 0 chr10 120825833 120825877 -24763411 + AT_rich Low_complexity Low_complexity 1 44 0 56 39 0 0 chr10 120826255 120826332 -24762956 + AT_rich Low_complexity Low_complexity 1 77 0 25 51 0 0 chr10 120826373 120826412 -24762876 + AT_rich Low_complexity Low_complexity 1 39 0 23 0 0 0 chr10 120827036 120827059 -24762229 + AT_rich Low_complexity Low_complexity 1 23 0 536 280 124 53 chr10 120827071 120827713 -24761575 + L1ME2 LINE L1 5287 5950 -212 3757 174 31 57 chr10 120827999 120828804 -24760484 + LTR1 LTR ERV1 2 785 0 394 320 188 0 chr10 120828866 120828994 -24760294 - MER91A DNA MER1_type -44 152 1 2463 60 0 32 chr10 120829365 120829681 -24759607 + AluY SINE Alu 1 306 -5 1098 257 45 21 chr10 120829865 120830243 -24759045 - L2 LINE L2 -5 3308 2922 289 254 59 17 chr10 120830252 120830370 -24758918 - L2 LINE L2 -961 2353 2231 2609 277 36 50 chr10 120830487 120831638 -24757650 + L1ME LINE L1 3 1169 -4809 2005 142 7 13 chr10 120831638 120831948 -24757340 + AluJo SINE Alu 5 312 0 1903 188 0 0 chr10 120831951 120832254 -24757034 + AluSx SINE Alu 1 303 -9 2609 277 36 50 chr10 120832254 120832382 -24756906 + L1ME LINE L1 1017 1145 -4833 315 338 129 24 chr10 120832394 120833048 -24756240 + L2 LINE L2 2323 3083 -189 191 214 229 0 chr10 120833142 120833212 -24756076 + L2 LINE L2 3187 3272 0 1670 107 9 0 chr10 120834504 120834729 -24754559 - AluSp SINE Alu -14 299 73 1854 145 25 18 chr10 120835724 120836007 -24753281 + AluJo SINE Alu 1 285 -27 303 258 252 6 chr10 120836299 120836458 -24752830 + MLT1L LTR MaLR 83 280 -335 208 267 33 17 chr10 120836742 120836802 -24752486 + L2 LINE L2 3253 3313 0 299 250 88 0 chr10 120836819 120836899 -24752389 - L2 LINE L2 -39 3274 3188 2426 54 10 17 chr10 120838321 120838616 -24750672 + AluY SINE Alu 1 293 -18 260 254 79 0 chr10 120838647 120838710 -24750578 - L2 LINE L2 -58 3255 3188 1306 271 86 45 chr10 120838853 120839274 -24750014 + MLT1K LTR MaLR 129 566 -22 2367 99 0 10 chr10 120839354 120839657 -24749631 + AluSx SINE Alu 1 300 -12 1131 265 103 49 chr10 120839668 120840235 -24749053 - L2 LINE L2 0 3313 2778 2423 81 0 7 chr10 120840235 120840532 -24748756 + AluSq SINE Alu 1 295 -18 1131 265 103 49 chr10 120840532 120840865 -24748423 - L2 LINE L2 -535 2778 2340 2702 62 12 3 chr10 120840865 120841206 -24748082 + LTR14A LTR ERVK 1 344 0 1131 265 103 49 chr10 120841206 120841284 -24748004 - L2 LINE L2 -973 2340 2268 1123 133 11 32 chr10 120841300 120841488 -24747800 - MLT1B LTR MaLR -48 342 159 8043 111 119 78 chr10 120841490 120843116 -24746172 + pTR5 LTR ERV1 745 2438 0 309 221 0 0 chr10 120843118 120843186 -24746102 - MLT1B LTR MaLR -227 163 96 1654 200 0 7 chr10 120843201 120843501 -24745787 - AluJo SINE Alu -14 298 1 2099 84 69 4 chr10 120843510 120843785 -24745503 - AluSx SINE Alu -19 293 1 1505 136 55 0 chr10 120843794 120844051 -24745237 - L1MA5A LINE L1 -4 6293 6023 709 202 105 66 chr10 120844149 120844377 -24744911 + L1ME3A LINE L1 5929 6165 -5 625 253 0 7 chr10 120844396 120844542 -24744746 + MIR3 SINE MIR 36 180 -28 2324 104 0 19 chr10 120844811 120845128 -24744160 + AluSq SINE Alu 1 311 -2 2306 112 0 0 chr10 120845286 120845590 -24743698 + AluSg SINE Alu 1 304 -6 456 207 14 159 chr10 120845972 120846180 -24743108 + MIR SINE MIR 85 262 0 331 341 67 0 chr10 120847477 120847641 -24741647 - MER5B DNA MER1_type -2 176 2 492 305 7 0 chr10 120848036 120848190 -24741098 + MIR SINE MIR 35 189 -73 437 272 114 75 chr10 120848224 120848342 -24740946 + L2 LINE L2 1550 1662 -1652 1749 136 222 0 chr10 120848342 120848666 -24740622 + MSTD LTR MaLR 1 396 0 437 272 114 75 chr10 120848666 120848959 -24740329 + L2 LINE L2 1662 1977 -1337 260 287 49 33 chr10 120848952 120849074 -24740214 - L2 LINE L2 -354 2959 2836 * 279 79 0 0 chr10 120849706 120849744 -24739544 + (TG)n Simple_repeat Simple_repeat 2 39 0 2062 102 18 14 chr10 120849744 120849890 -24739398 - AluSx SINE Alu -28 284 135 2437 75 3 0 chr10 120849890 120850184 -24739104 - AluSp SINE Alu -18 295 1 2062 102 18 14 chr10 120850184 120850320 -24738968 - AluSx SINE Alu -177 135 1 198 144 33 33 chr10 120850487 120850577 -24738711 + (CA)n Simple_repeat Simple_repeat 2 91 0 212 172 81 35 chr10 120851659 120851746 -24737542 + MER5C DNA MER1_type 212 302 -22 318 225 81 0 chr10 120851764 120851875 -24737413 + L1ME LINE L1 5148 5267 -879 557 300 43 53 chr10 120851899 120852406 -24736882 + L1ME LINE L1 5317 5818 -346 297 251 127 56 chr10 120853679 120853898 -24735390 - L1MC4a LINE L1 -370 5751 5689 637 293 35 22 chr10 120854249 120854478 -24734810 - MLT1K LTR MaLR -41 547 316 1929 152 96 0 chr10 120854731 120855105 -24734183 - MSTB LTR MaLR -15 411 2 204 143 0 0 chr10 120856083 120856125 -24733163 + (TC)n Simple_repeat Simple_repeat 2 43 0 293 155 12 83 chr10 120856142 120856226 -24733062 - MER101B LTR ERV1 -33 537 460 480 35 0 0 chr10 120856419 120856477 -24732811 + (TG)n Simple_repeat Simple_repeat 2 59 0 277 324 85 11 chr10 120856742 120856918 -24732370 + L2 LINE L2 2891 3079 -193 202 279 144 39 chr10 120857058 120857162 -24732126 + L2 LINE L2 3158 3272 0 906 150 0 0 chr10 120857187 120857320 -24731968 + FLAM_C SINE Alu 1 133 0 2217 169 16 0 chr10 120857400 120857784 -24731504 + MER57A LTR ERV1 1 390 -13 192 284 204 37 chr10 120858383 120858545 -24730743 + MIR3 SINE MIR 1 189 -19 2368 161 62 5 chr10 120859039 120859444 -24729844 - MSTA LTR MaLR 0 428 1 2176 133 21 29 chr10 120859695 120860072 -24729216 - THE1C LTR MaLR -1 374 1 495 243 0 27 chr10 120860646 120860757 -24728531 + L2 LINE L2 3206 3313 0 529 232 0 0 chr10 120860943 120861055 -24728233 + L1ME4a LINE L1 5560 5671 -450 701 286 50 23 chr10 120861087 120861307 -24727981 - MIR SINE MIR -13 249 24 339 256 56 56 chr10 120861319 120861428 -24727860 + L1ME4a LINE L1 5714 5825 -296 1768 194 0 3 chr10 120861428 120861727 -24727561 + AluJo SINE Alu 1 298 -14 339 256 56 56 chr10 120861727 120861797 -24727491 + L1ME4a LINE L1 5824 5893 -228 1268 243 139 23 chr10 120861797 120862230 -24727058 + MLT1D LTR MaLR 1 483 -22 206 164 273 0 chr10 120862477 120862532 -24726756 - L2 LINE L2 -5 3267 3198 330 237 78 82 chr10 120862582 120862786 -24726502 - MIR3 SINE MIR -61 201 5 729 246 86 11 chr10 120862886 120863073 -24726215 + MER58A DNA MER1_type 24 224 0 757 281 81 5 chr10 120863205 120863426 -24725862 - MIR SINE MIR 0 262 25 381 252 211 0 chr10 120865920 120866043 -24723245 + MIR3 SINE MIR 16 164 -44 566 224 20 20 chr10 120866439 120866586 -24722702 + MER69 DNA AcHobo 2380 2526 0 217 62 42 62 chr10 120866733 120866781 -24722507 + (TTTCC)n Simple_repeat Simple_repeat 3 49 0 288 218 26 26 chr10 120867228 120867306 -24721982 + MIR SINE MIR 56 133 -129 268 235 133 7 chr10 120867892 120868033 -24721255 + MIR SINE MIR 30 191 -71 695 216 116 25 chr10 120868784 120868983 -24720305 - MIR SINE MIR -40 222 6 432 314 57 0 chr10 120869836 120869995 -24719293 - MIR SINE MIR -14 248 81 2283 58 22 0 chr10 120870189 120870500 -24718788 + AluY SINE Alu 1 317 0 233 29 0 29 chr10 120870698 120870733 -24718555 + (GAAAA)n Simple_repeat Simple_repeat 2 35 0 567 0 0 0 chr10 120870810 120870873 -24718415 + (TTTC)n Simple_repeat Simple_repeat 2 64 0 2088 137 10 0 chr10 120870880 120871187 -24718101 - AluSx SINE Alu -2 310 1 497 260 99 22 chr10 120871285 120871463 -24717825 - MIR SINE MIR -65 143 4 381 325 63 24 chr10 120872041 120872247 -24717041 + MIR SINE MIR 24 237 -25 210 193 0 0 chr10 120872477 120872534 -24716754 + (TG)n Simple_repeat Simple_repeat 1 57 0 2253 65 0 4 chr10 120872990 120873267 -24716021 + AluY SINE Alu 21 296 -15 517 229 130 31 chr10 120873441 120873633 -24715655 - MER20 DNA MER1_type -7 212 2 375 326 28 21 chr10 120873770 120873911 -24715377 + MIR3 SINE MIR 33 174 -34 374 304 29 0 chr10 120873931 120874033 -24715255 - MIR SINE MIR -55 153 49 380 284 83 24 chr10 120875913 120876082 -24713206 - MER5A DNA MER1_type -4 185 7 779 251 161 0 chr10 120876093 120876304 -24712984 + MIR SINE MIR 15 259 -3 329 342 50 0 chr10 120877561 120877681 -24711607 + MIR SINE MIR 73 198 -64 501 269 110 32 chr10 120877965 120878184 -24711104 + MIR SINE MIR 2 237 -25 241 239 183 0 chr10 120878758 120878829 -24710459 + L2 LINE L2 3182 3265 -48 1302 268 42 29 chr10 120879043 120879494 -24709794 + LTR16B LTR ERVL 8 464 0 403 319 25 0 chr10 120879620 120879739 -24709549 + L2 LINE L2 3192 3313 0 2473 76 0 16 chr10 120879872 120880188 -24709100 - AluY SINE Alu 0 311 1 2198 122 3 0 chr10 120880889 120881185 -24708103 + AluSc SINE Alu 1 297 -12 1223 190 69 7 chr10 120881186 120881488 -24707800 + L1MB4 LINE L1 5632 5952 -169 2744 61 0 0 chr10 120881493 120881837 -24707451 + L1PA7 LINE L1 5805 6148 -6 297 51 0 0 chr10 120881849 120881888 -24707400 + (CATA)n Simple_repeat Simple_repeat 2 40 0 1356 128 42 26 chr10 120881888 120882153 -24707135 + L1MB4 LINE L1 5912 6180 0 701 175 18 35 chr10 120882199 120882370 -24706918 - LTR7 LTR ERV1 -7 443 276 776 94 78 8 chr10 120882416 120882544 -24706744 - LTR7 LTR ERV1 -313 137 1 611 268 68 24 chr10 120882632 120882837 -24706451 + MIR SINE MIR 48 261 -1 235 302 16 0 chr10 120882885 120882948 -24706340 - MIR SINE MIR -112 96 33 333 282 29 10 chr10 120883217 120883320 -24705968 + MIR SINE MIR 158 262 0 368 283 62 14 chr10 120884247 120884392 -24704896 + LTR16C LTR ERVL 340 491 0 383 318 53 21 chr10 120884430 120884619 -24704669 - L2 LINE L2 -167 3105 2911 1730 81 14 0 chr10 120885273 120885494 -24703794 - AluSp SINE Alu -8 305 82 688 224 141 0 chr10 120885854 120886024 -24703264 - MIR SINE MIR -9 253 60 224 213 21 0 chr10 120887023 120887070 -24702218 + CT-rich Low_complexity Low_complexity 2 49 0 499 248 19 68 chr10 120888614 120888775 -24700513 + L2 LINE L2 2901 3053 -219 236 167 58 0 chr10 120888836 120888956 -24700332 + (TA)n Simple_repeat Simple_repeat 1 127 0 22 0 0 0 chr10 120888991 120889013 -24700275 + AT_rich Low_complexity Low_complexity 1 22 0 2122 134 3 27 chr10 120889016 120889114 -24700174 - L1MB7 LINE L1 -16 6168 6069 2429 123 10 31 chr10 120889114 120889497 -24699791 + THE1C LTR MaLR 1 375 0 2122 134 3 27 chr10 120889497 120889763 -24699525 - L1MB7 LINE L1 -115 6069 5813 21 57 0 0 chr10 120889886 120889921 -24699367 + AT_rich Low_complexity Low_complexity 1 35 0 1951 131 21 14 chr10 120889924 120890215 -24699073 - AluJb SINE Alu -19 293 1 2572 171 52 2 chr10 120891032 120891553 -24697735 - L1MB7 LINE L1 -354 5830 5284 237 345 53 0 chr10 120891613 120891726 -24697562 + L2 LINE L2 3136 3254 -18 710 237 130 19 chr10 120892159 120892421 -24696867 + LTR33 LTR ERVL 2 292 -229 299 259 54 9 chr10 120892492 120892604 -24696684 + LTR33 LTR ERVL 405 521 0 508 314 38 0 chr10 120892630 120892839 -24696449 + MIR SINE MIR 44 261 -1 195 329 27 0 chr10 120893156 120893229 -24696059 + L3 LINE CR1 1268 1342 -235 267 266 57 32 chr10 120893307 120893431 -24695857 + MIR3 SINE MIR 11 137 -71 242 264 66 83 chr10 120893864 120893985 -24695303 - L2 LINE L2 -1 3271 3153 204 283 142 26 chr10 120894028 120894141 -24695147 + MIR SINE MIR 62 187 -75 1874 112 0 0 chr10 120894181 120894432 -24694856 + AluY SINE Alu 1 251 -60 333 241 36 0 chr10 120894532 120894615 -24694673 - AluJo SINE Alu -100 202 117 279 289 13 0 chr10 120895666 120895742 -24693546 + MIR SINE MIR 116 192 -70 210 237 33 30 chr10 120895817 120895928 -24693360 + MIR SINE MIR 39 138 -70 297 0 0 0 chr10 120896612 120896645 -24692643 + (CA)n Simple_repeat Simple_repeat 2 34 0 2089 138 0 0 chr10 120896645 120896949 -24692339 - AluJb SINE Alu -8 304 1 347 310 77 39 chr10 120896953 120897108 -24692180 + L1ME4a LINE L1 5950 6110 -11 2304 112 0 3 chr10 120897475 120897780 -24691508 - AluSq SINE Alu -9 304 1 457 267 94 11 chr10 120897863 120898090 -24691198 - MIR SINE MIR 0 262 7 727 262 108 37 chr10 120898302 120898710 -24690578 + HAL1 LINE L1 2071 2507 0 1185 82 0 16 chr10 120899585 120899768 -24689520 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 463 231 0 11 chr10 120899870 120899961 -24689327 - AluJb SINE Alu -89 223 134 2463 81 0 0 chr10 120899961 120900257 -24689031 - AluSg SINE Alu -14 296 1 370 102 5 0 chr10 120900259 120900314 -24688974 - L1PA11 LINE L1 -41 6120 6066 454 253 82 0 chr10 120900677 120900823 -24688465 - L1ME4a LINE L1 -1 6120 5963 634 340 20 12 chr10 120901243 120901490 -24687798 + MIR SINE MIR 5 253 -9 180 0 0 0 chr10 120901897 120901917 -24687371 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 307 225 50 12 chr10 120902004 120902084 -24687204 + MIR3 SINE MIR 103 185 -23 1227 45 0 0 chr10 120902095 120902249 -24687039 + (TCCA)n Simple_repeat Simple_repeat 1 154 0 296 317 168 55 chr10 120902633 120902942 -24686346 - L2 LINE L2 -14 3258 2915 292 316 43 0 chr10 120903044 120903161 -24686127 - L2 LINE L2 -506 2808 2687 1043 180 0 40 chr10 120903611 120903628 -24685660 + AluJb SINE Alu 121 137 -175 1489 171 91 4 chr10 120903628 120903903 -24685385 + AluSq SINE Alu 1 299 -14 1043 180 0 40 chr10 120903903 120904085 -24685203 + AluJb SINE Alu 137 312 0 1900 158 26 7 chr10 120905357 120905660 -24683628 - AluJo SINE Alu -3 309 1 370 307 97 0 chr10 120906255 120906431 -24682857 - MIR SINE MIR -31 231 39 233 311 0 97 chr10 120906423 120906526 -24682762 - MER5A DNA MER1_type -95 94 2 * 229 311 39 10 chr10 120906829 120906932 -24682356 - MIR SINE MIR -140 122 17 491 220 180 7 chr10 120906939 120907089 -24682199 + MER97a DNA MER1_type? 1 176 -718 423 265 22 29 chr10 120908004 120908140 -24681148 + MIR3 SINE MIR 4 138 -70 948 232 113 45 chr10 120908231 120908670 -24680618 + MLT1H LTR MaLR 1 526 -23 910 262 8 38 chr10 120908675 120908938 -24680350 - MIR SINE MIR -4 258 4 367 244 25 25 chr10 120908939 120909058 -24680230 - L2 LINE L2 -77 3236 3118 190 287 11 64 chr10 120909159 120909253 -24680035 - MER5A DNA MER1_type -2 187 99 2241 101 0 20 chr10 120909313 120909782 -24679506 - AluSg SINE Alu 0 310 1 206 291 23 35 chr10 120909847 120909933 -24679355 - MER5B DNA MER1_type -21 157 73 493 92 0 0 chr10 120909934 120909999 -24679289 - Alu SINE Alu -21 288 224 960 92 0 0 chr10 120909999 120910119 -24679169 - AluSq/x SINE Alu -193 120 1 288 184 0 0 chr10 120910130 120910179 -24679109 - MER5B DNA MER1_type -123 55 7 285 98 0 0 chr10 120912119 120912160 -24677128 + (T)n Simple_repeat Simple_repeat 1 41 0 851 228 117 57 chr10 120912160 120912511 -24676777 - MLT1K LTR MaLR -53 535 164 402 268 60 15 chr10 120913122 120913302 -24675986 + MIR SINE MIR 20 208 -54 320 261 11 23 chr10 120914227 120914315 -24674973 + MIR SINE MIR 49 135 -127 897 304 47 47 chr10 120914851 120915322 -24673966 - MLT1K LTR MaLR -3 585 115 498 276 53 6 chr10 120915581 120915751 -24673537 - LTR67 LTR ERVL -1 556 379 367 325 96 0 chr10 120915837 120915994 -24673294 + MIR SINE MIR 4 175 -87 314 298 131 30 chr10 120916360 120916528 -24672760 - MIR SINE MIR -13 249 65 485 200 22 23 chr10 120916575 120916733 -24672555 + MER3 DNA MER1_type 15 205 -4 822 228 107 78 chr10 120918224 120918324 -24670964 + MLT1L LTR MaLR 154 250 -365 2369 83 0 7 chr10 120918324 120918624 -24670664 + AluY SINE Alu 1 298 -13 822 228 107 78 chr10 120918624 120918905 -24670383 + MLT1L LTR MaLR 250 546 -69 1814 148 6 54 chr10 120918905 120919222 -24670066 + AluJb SINE Alu 1 302 -10 210 274 0 0 chr10 120919295 120919346 -24669942 - MIR SINE MIR -26 236 186 294 324 9 59 chr10 120919468 120919687 -24669601 - L2 LINE L2 -219 3053 2846 249 246 18 0 chr10 120919693 120919750 -24669538 - MER96 DNA MER1_type? -91 84 27 403 277 181 0 chr10 120919774 120919940 -24669348 + MIR SINE MIR 32 227 -35 22 0 0 0 chr10 120919959 120919981 -24669307 + AT_rich Low_complexity Low_complexity 1 22 0 622 152 7 43 chr10 120920612 120920750 -24668538 - FLAM_A SINE Alu 0 133 1 647 174 71 19 chr10 120920917 120921072 -24668216 + MER58B DNA MER1_type 1 163 -178 966 133 7 0 chr10 120921088 120921223 -24668065 - AluJo SINE Alu -176 136 1 1023 195 5 0 chr10 120921223 120921413 -24667875 + MER58B DNA MER1_type 151 341 0 305 316 11 46 chr10 120921413 120921640 -24667648 + MLT1J LTR MaLR 113 298 -213 417 279 0 37 chr10 120922106 120922242 -24667046 - MIR SINE MIR -81 181 51 746 278 10 15 chr10 120922736 120922941 -24666347 - MIR SINE MIR -12 250 47 209 0 97 0 chr10 120922942 120922973 -24666315 + T-rich Low_complexity Low_complexity 2 35 0 183 325 26 13 chr10 120923743 120923820 -24665468 + L2 LINE L2 3195 3272 0 248 329 0 0 chr10 120924266 120924345 -24664943 - MIR SINE MIR -118 144 66 812 162 20 97 chr10 120924356 120924603 -24664685 + MER33 DNA MER1_type 2 229 -95 1371 140 17 14 chr10 120924603 120924958 -24664330 + Tigger2a DNA MER2_type 1 444 0 308 113 9 217 chr10 120924958 120925022 -24664266 + MER33 DNA MER1_type 267 298 -2326 798 159 0 0 chr10 120925022 120925154 -24664134 - FLAM_A SINE Alu -1 132 1 308 113 9 217 chr10 120925154 120925204 -24664084 + MER33 DNA MER1_type 298 357 -6 287 271 28 47 chr10 120925204 120925254 -24664034 - L3 LINE CR1 -86 1491 1442 1575 150 126 109 chr10 120925254 120925713 -24663575 - MLT1C LTR MaLR 0 467 1 287 271 28 47 chr10 120925713 120925769 -24663519 - L3 LINE CR1 -135 1442 1387 253 300 44 11 chr10 120926330 120926420 -24662868 + MIR SINE MIR 60 152 -110 531 220 151 31 chr10 120926609 120926768 -24662520 + MER5A DNA MER1_type 11 188 -1 328 318 89 37 chr10 120926771 120927092 -24662196 + MLT1K LTR MaLR 2 422 -166 384 40 0 0 chr10 120927092 120927142 -24662146 + (TG)n Simple_repeat Simple_repeat 2 51 0 328 318 89 37 chr10 120927142 120927240 -24662048 + MLT1K LTR MaLR 422 513 -75 218 196 0 20 chr10 120928058 120928109 -24661179 + (TG)n Simple_repeat Simple_repeat 1 50 0 238 263 0 42 chr10 120929071 120929166 -24660122 + GA-rich Low_complexity Low_complexity 2 92 0 276 257 302 11 chr10 120929791 120929970 -24659318 - MIR SINE MIR 0 262 32 243 0 0 0 chr10 120930492 120930519 -24658769 + (A)n Simple_repeat Simple_repeat 1 27 0 606 250 38 0 chr10 120930524 120930684 -24658604 - L1MC4a LINE L1 -1917 5891 5726 425 240 75 7 chr10 120930805 120930951 -24658337 - L1MC4a LINE L1 -2305 5503 5348 870 177 6 12 chr10 120930982 120931146 -24658142 - FRAM SINE Alu -2 174 12 1641 194 27 10 chr10 120931293 120931587 -24657701 - AluJo SINE Alu -13 299 1 831 134 0 8 chr10 120931921 120932055 -24657233 - FLAM_C SINE Alu 0 133 1 453 276 65 20 chr10 120932322 120932521 -24656767 + L2 LINE L2 2890 3097 -216 246 81 0 0 chr10 120933720 120933757 -24655531 + (GA)n Simple_repeat Simple_repeat 2 38 0 334 200 20 50 chr10 120934136 120934236 -24655052 + CT-rich Low_complexity Low_complexity 5 101 0 988 204 11 0 chr10 120934236 120934578 -24654710 - AluJo SINE Alu 0 463 120 4173 139 29 91 chr10 120934610 120935218 -24654070 + L1MB4 LINE L1 5135 5779 -401 2293 120 0 19 chr10 120935218 120935535 -24653753 - AluSx SINE Alu -1 311 1 4173 139 29 91 chr10 120935535 120935994 -24653294 + L1MB4 LINE L1 5779 6135 -45 2288 94 3 0 chr10 120935994 120936280 -24653008 + AluSx SINE Alu 7 293 -19 4173 139 29 91 chr10 120936280 120936324 -24652964 + L1MB4 LINE L1 6135 6180 0 200 299 31 62 chr10 120936327 120936424 -24652864 - MIR3 SINE MIR -28 180 87 2413 108 0 6 chr10 120936450 120936764 -24652524 - AluSx SINE Alu 0 312 1 227 291 0 0 chr10 120936821 120936876 -24652412 + Tigger5 DNA MER2_type 1 55 -2268 * 327 225 0 14 chr10 120936848 120936919 -24652369 + Tigger5 DNA MER2_type 2254 2323 0 401 308 40 36 chr10 120937021 120937196 -24652092 - L1MC4a LINE L1 -1882 5926 5748 1644 171 56 34 chr10 120937196 120937503 -24651785 + MLT1A1 LTR MaLR 1 319 -46 2339 107 0 0 chr10 120937503 120937802 -24651486 + AluSc SINE Alu 1 299 -10 1644 171 56 34 chr10 120937802 120937851 -24651437 + MLT1A1 LTR MaLR 319 365 0 401 308 40 36 chr10 120937851 120937922 -24651366 - L1MC4a LINE L1 -2060 5748 5679 726 102 9 0 chr10 120938030 120938138 -24651150 - AluY SINE Alu -6 305 197 356 222 21 76 chr10 120938915 120939059 -24650229 + L1MC5 LINE L1 7797 7932 -29 348 233 126 0 chr10 120939396 120939499 -24649789 - L2 LINE L2 0 3272 3157 628 123 62 85 chr10 120940596 120940621 -24648667 - FLAM_C SINE Alu -173 129 105 2256 76 3 17 chr10 120940621 120940922 -24648366 + AluSp SINE Alu 1 297 -16 628 123 62 85 chr10 120940922 120941026 -24648262 - FLAM_C SINE Alu -197 105 3 2101 102 58 24 chr10 120941032 120941326 -24647962 - AluSg SINE Alu -6 304 1 768 227 41 6 chr10 120941609 120941781 -24647507 + MER45A DNA AcHobo 1 178 0 229 250 31 16 chr10 120943364 120943428 -24645860 + MIR SINE MIR 19 83 -125 204 125 0 0 chr10 120943434 120943466 -24645822 + (TCTA)n Simple_repeat Simple_repeat 1 32 0 241 296 104 17 chr10 120943572 120943687 -24645601 + MIR SINE MIR 84 208 -54 628 200 22 0 chr10 120943800 120943935 -24645353 + MIR SINE MIR 120 257 -5 603 239 16 119 chr10 120944328 120944579 -24644709 + MIR SINE MIR 21 245 -17 22 0 0 0 chr10 120944588 120944610 -24644678 + AT_rich Low_complexity Low_complexity 1 22 0 319 161 0 16 chr10 120944781 120944843 -24644445 - MIR SINE MIR -72 190 130 1057 175 27 16 chr10 120945129 120945312 -24643976 + AluJo SINE Alu 116 300 -12 26 0 0 0 chr10 120945312 120945338 -24643950 + AT_rich Low_complexity Low_complexity 1 26 0 1544 164 77 7 chr10 120945657 120945931 -24643357 - AluJb SINE Alu -13 299 7 1926 103 82 4 chr10 120946258 120946539 -24642749 + AluSp SINE Alu 1 303 -10 218 308 161 14 chr10 120947002 120947145 -24642143 + MIR SINE MIR 16 179 -83 358 146 29 0 chr10 120947186 120947264 -24642024 - MER5A DNA MER1_type -105 84 4 206 329 0 14 chr10 120947272 120947345 -24641943 + MIR SINE MIR 153 224 -38 586 269 10 61 chr10 120947463 120947660 -24641628 + MIR3 SINE MIR 21 207 -1 254 279 164 18 chr10 120948293 120948458 -24640830 - MIR SINE MIR -6 256 68 506 307 51 27 chr10 120948941 120949198 -24640090 + L1ME4a LINE L1 5572 5834 -287 306 321 95 7 chr10 120949247 120949384 -24639904 - MIR SINE MIR 0 262 114 230 333 0 11 chr10 120949771 120949864 -24639424 - L1MC/D LINE L1 -2030 5778 5687 2521 81 7 0 chr10 120949897 120950206 -24639082 - AluSq SINE Alu -2 311 1 1136 83 0 0 chr10 120950206 120950339 -24638949 - AluSg SINE Alu -177 133 1 430 282 58 19 chr10 120950956 120951112 -24638176 + MIR SINE MIR 62 223 -39 2290 100 3 0 chr10 120951495 120951794 -24637494 + AluSq SINE Alu 3 302 -11 1556 171 56 25 chr10 120951916 120952202 -24637086 + AluJo SINE Alu 1 295 -17 329 336 74 55 chr10 120952409 120952461 -24636827 + MIR SINE MIR 2 52 -210 1521 232 3 3 chr10 120952461 120952638 -24636650 - AluJo SINE Alu -2 310 134 207 69 0 0 chr10 120952638 120952667 -24636621 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1521 232 3 3 chr10 120952667 120952680 -24636608 - AluJo SINE Alu -178 134 122 2472 70 20 0 chr10 120952680 120952982 -24636306 + AluSp SINE Alu 1 308 -5 1521 232 3 3 chr10 120952982 120953100 -24636188 - AluJo SINE Alu -189 123 1 329 336 74 55 chr10 120953100 120953303 -24635985 + MIR SINE MIR 52 262 0 1748 176 20 13 chr10 120953521 120953822 -24635466 + AluJo SINE Alu 2 304 -8 254 212 30 15 chr10 120953822 120953888 -24635400 + GA-rich Low_complexity Low_complexity 1 67 0 1107 196 98 136 chr10 120954060 120954490 -24634798 - L2 LINE L2 0 3313 2910 802 161 81 52 chr10 120954490 120954701 -24634587 + MER20 DNA MER1_type 1 217 -2 1107 196 98 136 chr10 120954701 120954862 -24634426 - L2 LINE L2 -403 2910 2744 2008 142 0 0 chr10 120955242 120955523 -24633765 - AluSx SINE Alu -21 291 11 241 238 38 0 chr10 120955920 120956000 -24633288 - L1MC4 LINE L1 -1346 6696 6614 201 147 0 0 chr10 120956032 120956066 -24633222 + (TATG)n Simple_repeat Simple_repeat 3 36 0 1618 154 66 8 chr10 120956066 120956325 -24632963 - AluJb SINE Alu -38 274 1 219 229 49 16 chr10 120956337 120956398 -24632890 - MER5A DNA MER1_type -80 109 47 294 247 103 0 chr10 120956572 120956669 -24632619 - MER5A DNA MER1_type 0 189 83 321 278 0 11 chr10 120956816 120956906 -24632382 - MIR SINE MIR -1 261 173 812 174 0 8 chr10 120956906 120957038 -24632250 + FLAM_C SINE Alu 1 131 -12 2191 92 3 0 chr10 120957089 120957396 -24631892 - AluSg SINE Alu 0 308 1 240 284 17 15 chr10 120957426 120957510 -24631778 - MIR SINE MIR -121 87 2 1745 144 57 30 chr10 120957759 120958058 -24631230 - AluSx SINE Alu -4 308 2 1326 151 74 74 chr10 120958110 120958395 -24630893 - AluJo SINE Alu -23 289 5 193 274 235 10 chr10 120958480 120958582 -24630706 + L2 LINE L2 3129 3253 -19 1031 296 177 12 chr10 120958667 120959483 -24629805 - L2 LINE L2 0 3313 2355 1672 171 97 46 chr10 120959520 120959953 -24629335 + MLT1D LTR MaLR 51 505 0 205 256 77 77 chr10 120959964 120960120 -24629168 - L2 LINE L2 -994 2320 2165 374 315 80 19 chr10 120960363 120960525 -24628763 - MIR SINE MIR -11 251 80 1972 161 3 0 chr10 120960535 120960840 -24628448 + AluJb SINE Alu 7 312 0 360 289 21 42 chr10 120961024 120961166 -24628122 - MIR SINE MIR -72 190 52 485 225 47 16 chr10 120961511 120961640 -24627648 + L2 LINE L2 3181 3313 0 242 323 137 0 chr10 120961642 120961766 -24627522 - L2 LINE L2 -5 3267 3127 396 219 24 0 chr10 120961944 120962026 -24627262 + MIR SINE MIR 17 100 -162 223 302 78 54 chr10 120962042 120962171 -24627117 - MER5A DNA MER1_type -51 138 7 380 258 187 19 chr10 120962761 120962916 -24626372 - L2 LINE L2 -1 3312 3132 1797 154 21 4 chr10 120962943 120963223 -24626065 + AluJb SINE Alu 13 297 -15 1624 83 18 31 chr10 120963295 120963395 -24625893 - MER30 DNA MER1_type -4 226 126 2384 90 7 0 chr10 120963395 120963695 -24625593 + AluSq SINE Alu 2 303 -10 1624 83 18 31 chr10 120963695 120963823 -24625465 - MER30 DNA MER1_type -104 126 1 222 353 0 0 chr10 120963872 120963940 -24625348 - L3 LINE CR1 -82 1495 1428 444 297 29 34 chr10 120964030 120964205 -24625083 - MIR SINE MIR -71 191 18 2092 126 14 3 chr10 120964835 120965128 -24624160 + AluSx SINE Alu 1 296 -16 3454 162 29 3 chr10 120965138 120965767 -24623521 + L1P LINE L1 11 655 -5491 9993 62 10 9 chr10 120965771 120966704 -24622584 + L1PA6 LINE L1 4089 5019 -1135 2099 115 3 40 chr10 120966704 120967025 -24622263 + AluSg SINE Alu 1 309 -1 9993 62 10 9 chr10 120967025 120968170 -24621118 + L1PA6 LINE L1 5019 6154 0 2430 75 0 0 chr10 120968174 120968467 -24620821 + AluY SINE Alu 1 293 -18 185 299 0 13 chr10 120968669 120968746 -24620542 + L2 LINE L2 3142 3217 -96 2503 58 3 0 chr10 120968785 120969080 -24620208 + AluY SINE Alu 1 296 -15 320 264 47 19 chr10 120969342 120969448 -24619840 - L1ME3A LINE L1 -219 5951 5843 22 0 0 0 chr10 120969453 120969475 -24619813 + AT_rich Low_complexity Low_complexity 1 22 0 2179 132 0 22 chr10 120969507 120969857 -24619431 - AluSx SINE Alu 0 312 1 1051 110 0 0 chr10 120969857 120969993 -24619295 - AluJb SINE Alu -176 136 1 678 238 111 55 chr10 120969994 120970338 -24618950 - L1ME3A LINE L1 -316 5854 5492 942 166 43 0 chr10 120970669 120970738 -24618550 + AluSg SINE Alu 60 125 -185 348 24 0 0 chr10 120970738 120970779 -24618509 + (TAA)n Simple_repeat Simple_repeat 2 42 0 942 166 43 0 chr10 120970779 120970872 -24618416 + AluSg SINE Alu 125 229 -81 396 0 0 0 chr10 120971095 120971139 -24618149 + (CA)n Simple_repeat Simple_repeat 1 44 0 1839 158 21 17 chr10 120971869 120972160 -24617128 + AluJo SINE Alu 1 292 -20 470 320 111 23 chr10 120972268 120972618 -24616670 + L1MC4a LINE L1 5549 5929 -1879 486 0 0 0 chr10 120972629 120972683 -24616605 + (TG)n Simple_repeat Simple_repeat 1 54 0 742 298 117 15 chr10 120973264 120973804 -24615484 + L2 LINE L2 2652 3244 -69 461 226 161 15 chr10 120974456 120974593 -24614695 - MIR SINE MIR -70 192 36 1783 191 67 29 chr10 120976331 120976611 -24612677 - MLT1C LTR MaLR 0 467 199 234 0 0 0 chr10 120976611 120976637 -24612651 + (TC)n Simple_repeat Simple_repeat 2 27 0 2304 102 0 0 chr10 120976637 120976930 -24612358 - AluY SINE Alu -17 294 2 1783 191 67 29 chr10 120976930 120977098 -24612190 - MLT1C LTR MaLR -267 200 1 295 242 248 13 chr10 120978340 120978493 -24610795 - MER5A DNA MER1_type 0 189 1 493 176 0 0 chr10 120978871 120978956 -24610332 - AluJ/FRAM SINE Alu -11 301 217 234 357 0 0 chr10 120979104 120979174 -24610114 + L2 LINE L2 3202 3271 -1 276 326 85 7 chr10 120980051 120980192 -24609096 - L2 LINE L2 -10 3262 3111 334 276 90 8 chr10 120980320 120980454 -24608834 - MIR SINE MIR -36 226 82 284 297 163 29 chr10 120980976 120981215 -24608073 - MLT1K LTR MaLR -173 415 145 653 304 29 51 chr10 120981446 120981759 -24607529 - MLT1I LTR MaLR 0 409 104 324 191 16 0 chr10 120981839 120981902 -24607386 + MIR SINE MIR 72 135 -127 1536 180 67 0 chr10 120981902 120982186 -24607102 - AluJo SINE Alu -9 303 1 2321 107 3 16 chr10 120982219 120982536 -24606752 - AluSq SINE Alu 0 313 1 3295 89 9 86 chr10 120982601 120983182 -24606106 - L1MA1 LINE L1 -4 6298 5763 4606 158 9 19 chr10 120983182 120983759 -24605529 - L1 LINE L1 -2067 5498 4932 854 86 78 8 chr10 120983759 120983887 -24605401 - MER85 DNA T2_type -2 137 1 4606 158 9 19 chr10 120983887 120984191 -24605097 - L1 LINE L1 -2633 4932 4626 703 81 0 0 chr10 120984358 120984445 -24604843 + AluSc SINE Alu 158 244 -65 216 0 0 0 chr10 120985037 120985061 -24604227 + (T)n Simple_repeat Simple_repeat 1 24 0 192 241 0 0 chr10 120985067 120985125 -24604163 + CT-rich Low_complexity Low_complexity 3 60 0 186 43 0 0 chr10 120985283 120985306 -24603982 + (T)n Simple_repeat Simple_repeat 1 23 0 3667 180 35 18 chr10 120985698 120986073 -24603215 - L1 LINE L1 -2916 4649 4282 1657 182 64 14 chr10 120986073 120986370 -24602918 - AluJb SINE Alu 0 312 1 3667 180 35 18 chr10 120986370 120987348 -24601940 - L1 LINE L1 -3283 4282 3327 339 274 9 9 chr10 120987616 120987729 -24601559 + MIR SINE MIR 149 261 -1 227 322 110 14 chr10 120987841 120987987 -24601301 + MIR SINE MIR 79 238 -24 865 130 0 36 chr10 120988340 120988478 -24600810 - FLAM_C SINE Alu 0 133 1 631 308 62 53 chr10 120988483 120988840 -24600448 - L2 LINE L2 -1 3312 2953 931 234 56 20 chr10 120989537 120989772 -24599516 + MIR SINE MIR 21 257 -5 198 323 113 51 chr10 120989800 120990190 -24599098 - L2 LINE L2 -537 2777 2364 276 100 0 0 chr10 120991461 120991501 -24597787 + (TTTC)n Simple_repeat Simple_repeat 3 42 0 1865 173 6 19 chr10 120991503 120991816 -24597472 - AluJb SINE Alu -3 309 1 264 269 39 13 chr10 120991828 120991906 -24597382 + MIR SINE MIR 54 133 -75 248 330 66 28 chr10 120992587 120992693 -24596595 - MIR SINE MIR -61 147 38 407 200 22 22 chr10 120992815 120992905 -24596383 + L2 LINE L2 3219 3308 -5 2392 106 3 0 chr10 120993407 120993756 -24595532 + AluSx SINE Alu 1 350 0 468 248 40 67 chr10 120993802 120994004 -24595284 - MIR SINE MIR -9 253 13 2370 91 0 25 chr10 120994517 120994836 -24594452 - AluY SINE Alu 0 311 1 414 184 218 106 chr10 120994874 120995195 -24594093 + MLT1G1 LTR MaLR 188 584 -11 1682 154 35 51 chr10 120995195 120995506 -24593782 - AluJo SINE Alu -6 306 1 2544 66 3 0 chr10 120995772 120996073 -24593215 - AluY SINE Alu -9 302 1 779 228 92 0 chr10 120996292 120996476 -24592812 + MIR SINE MIR 31 231 -31 1945 154 0 23 chr10 120996689 120996994 -24592294 - AluJb SINE Alu -13 299 2 332 257 0 0 chr10 120997010 120997080 -24592208 + MIR SINE MIR 37 106 -102 21 0 0 0 chr10 120997254 120997275 -24592013 + AT_rich Low_complexity Low_complexity 1 21 0 2013 113 25 50 chr10 120997285 120997603 -24591685 + AluSx SINE Alu 1 310 -2 773 191 0 13 chr10 120997620 120997772 -24591516 - MER3 DNA MER1_type -59 150 1 240 271 16 90 chr10 120998385 120998507 -24590781 - MIR3 SINE MIR -86 122 10 1167 192 119 39 chr10 120999087 120999347 -24589941 + AluJo SINE Alu 1 281 -31 2047 130 0 23 chr10 120999733 121000032 -24589256 - AluSx SINE Alu -20 292 1 1445 142 0 43 chr10 121000238 121000471 -24588817 + AluJo SINE Alu 84 306 -6 22 94 0 0 chr10 121000471 121000535 -24588753 + AT_rich Low_complexity Low_complexity 1 64 0 348 137 0 0 chr10 121000541 121000592 -24588696 + MER66A LTR ERV1 287 337 -141 213 39 0 0 chr10 121000600 121000626 -24588662 + (TAA)n Simple_repeat Simple_repeat 3 28 0 470 311 0 0 chr10 121000650 121000769 -24588519 + L2 LINE L2 3195 3313 0 * 567 289 124 27 chr10 121000747 121000972 -24588316 - MIR SINE MIR -10 252 6 200 356 34 0 chr10 121001061 121001120 -24588168 + L2 LINE L2 3117 3177 -95 1003 220 68 4 chr10 121001268 121001504 -24587784 + MIR SINE MIR 11 261 -1 875 123 23 23 chr10 121001906 121002077 -24587211 - MER53 DNA DNA -4 185 15 2659 127 62 0 chr10 121002714 121003117 -24586171 - MSTA LTR MaLR 0 428 1 1462 153 9 90 chr10 121003185 121003427 -24585861 - MLT1B LTR MaLR 0 390 181 2070 108 49 0 chr10 121003427 121003714 -24585574 + AluSq SINE Alu 1 301 -12 1462 153 9 90 chr10 121003714 121003804 -24585484 - MLT1B LTR MaLR -209 181 85 348 51 254 0 chr10 121003806 121003865 -24585423 - MADE1 DNA Mariner -6 74 1 * 468 182 11 4 chr10 121003865 121003951 -24585337 - MLT1B LTR MaLR -325 65 1 405 291 94 87 chr10 121004034 121004702 -24584586 + L2 LINE L2 2558 3247 -25 409 355 41 6 chr10 121004805 121004977 -24584311 - MER5B DNA MER1_type 0 178 1 200 319 42 14 chr10 121005275 121005347 -24583941 - L2 LINE L2 0 3272 3199 606 252 33 13 chr10 121005541 121005692 -24583596 + MER5A DNA MER1_type 14 167 -22 2051 164 0 0 chr10 121005746 121006050 -24583238 + AluSx SINE Alu 1 304 -8 263 293 207 0 chr10 121006208 121006324 -24582964 - MIR SINE MIR -67 195 56 202 254 60 83 chr10 121006465 121006717 -24582571 - L2 LINE L2 -211 3061 2816 247 237 52 82 chr10 121006867 121006964 -24582324 + MIR SINE MIR 95 188 -74 266 268 134 76 chr10 121007513 121007622 -24581666 - MIR SINE MIR -51 211 89 1901 153 0 3 chr10 121007622 121007930 -24581358 + AluJb SINE Alu 6 312 0 266 268 134 76 chr10 121007930 121007977 -24581311 - MIR SINE MIR -173 89 46 2112 131 0 3 chr10 121008138 121008453 -24580835 + AluSx SINE Alu 1 562 0 349 45 61 30 chr10 121008453 121008701 -24580587 + GA-rich Low_complexity Low_complexity 4 180 0 23 0 0 0 chr10 121008871 121008894 -24580394 + GC_rich Low_complexity Low_complexity 1 23 0 270 319 130 0 chr10 121010847 121011016 -24578272 - L1MC/D LINE L1 -2038 5770 5580 252 344 76 45 chr10 121014197 121014354 -24574934 - MIR3 SINE MIR -15 193 32 424 250 115 53 chr10 121015399 121015607 -24573681 - MIR SINE MIR -29 233 13 627 250 53 24 chr10 121015821 121016029 -24573259 + MIR SINE MIR 49 262 0 264 183 32 151 chr10 121016626 121016719 -24572569 + HsTC2 DNA Tc2 6 87 -1811 234 233 0 0 chr10 121016691 121016734 -24572554 + HsTC2 DNA Tc2 1854 1896 -2 * 1649 181 0 16 chr10 121016742 121017046 -24572242 + AluJo SINE Alu 1 299 -13 180 266 21 53 chr10 121017880 121017974 -24571314 + L3 LINE CR1 941 1031 -546 293 298 71 0 chr10 121022398 121022482 -24566806 + MIR3 SINE MIR 93 182 -26 197 327 47 28 chr10 121023204 121023311 -24565977 + MIR SINE MIR 23 131 -77 2332 88 0 0 chr10 121025064 121025371 -24563917 - AluSg SINE Alu 0 310 4 457 252 10 0 chr10 121025375 121025478 -24563810 - MIR SINE MIR -101 161 58 744 321 103 29 chr10 121025633 121026050 -24563238 + L2 LINE L2 2866 3313 0 701 157 0 0 chr10 121026419 121026527 -24562761 + AluJb SINE Alu 194 301 -11 2529 32 7 3 chr10 121026593 121026903 -24562385 - AluY SINE Alu 0 311 1 1901 115 0 43 chr10 121026911 121027215 -24562073 - AluSx SINE Alu -21 291 1 472 294 162 34 chr10 121027796 121028000 -24561288 - MIR SINE MIR -13 249 20 2246 109 12 21 chr10 121028010 121028350 -24560938 + MER1B DNA MER1_type 1 337 0 1008 172 145 80 chr10 121028447 121028709 -24560579 + AluJo SINE Alu 1 279 -33 696 191 162 0 chr10 121029073 121029283 -24560005 - L1M4 LINE L1 -1598 4548 4305 * 4396 225 64 58 chr10 121029255 121029323 -24559965 - L1M4 LINE L1 -2291 3855 3789 1957 95 11 7 chr10 121029323 121029634 -24559654 - AluSx SINE Alu 0 312 1 4396 225 64 58 chr10 121029634 121029996 -24559292 - L1M4 LINE L1 -2357 3789 3430 2018 131 0 19 chr10 121029996 121030309 -24558979 - AluSx SINE Alu -5 307 1 4396 225 64 58 chr10 121030309 121030644 -24558644 - L1M4 LINE L1 -2716 3430 3098 2175 88 23 7 chr10 121030644 121030949 -24558339 - AluY SINE Alu -1 310 1 4396 225 64 58 chr10 121030949 121031625 -24557663 - L1M4 LINE L1 -3048 3098 2400 860 152 8 0 chr10 121031625 121031757 -24557531 - FLAM_C SINE Alu 0 133 1 4396 225 64 58 chr10 121031757 121031832 -24557456 - L1M4 LINE L1 -3746 2400 2327 1304 193 53 13 chr10 121031833 121032133 -24557155 - AluJo SINE Alu 0 312 1 2196 87 0 7 chr10 121032151 121032449 -24556839 + AluSx SINE Alu 1 296 -16 729 265 44 8 chr10 121032788 121033023 -24556265 - MIR SINE MIR -1 261 20 638 312 10 15 chr10 121033179 121033381 -24555907 + MIR3 SINE MIR 5 205 -3 243 200 95 57 chr10 121033576 121033681 -24555607 + L1ME4a LINE L1 5856 5964 -157 211 207 49 24 chr10 121033681 121033763 -24555525 + (TA)n Simple_repeat Simple_repeat 1 84 0 228 284 18 0 chr10 121033801 121033910 -24555378 + L1ME4a LINE L1 5971 6081 -40 663 254 39 79 chr10 121034670 121035012 -24554276 - L2 LINE L2 0 3313 2327 228 366 15 15 chr10 121035060 121035191 -24554097 + L2 LINE L2 2716 2846 -468 699 175 0 8 chr10 121035638 121035758 -24553530 + FLAM_C SINE Alu 2 120 -23 25 31 0 0 chr10 121035762 121035794 -24553494 + AT_rich Low_complexity Low_complexity 1 32 0 415 236 61 20 chr10 121036871 121037019 -24552269 - L1ME4a LINE L1 -6 6115 5962 2212 78 0 0 chr10 121037028 121037338 -24551950 - AluY SINE Alu 0 310 1 336 171 22 37 chr10 121037358 121037448 -24551840 + L1MC4 LINE L1 2003 6973 -1349 * 406 229 9 81 chr10 121037439 121037549 -24551739 + L1MC4 LINE L1 1995 6983 -1339 532 231 78 35 chr10 121037607 121037863 -24551425 - L1ME4a LINE L1 -113 6008 5742 401 267 228 24 chr10 121037924 121038130 -24551158 - MIR SINE MIR -8 254 7 333 326 67 17 chr10 121038257 121038435 -24550853 - L2 LINE L2 -74 3198 3012 308 382 16 0 chr10 121039323 121039446 -24549842 + MIR SINE MIR 132 256 -6 568 141 127 7 chr10 121039519 121039661 -24549627 - L1ME4a LINE L1 -4 6117 5959 1666 144 29 22 chr10 121039761 121040038 -24549250 - AluSx SINE Alu -20 292 14 239 276 163 0 chr10 121040522 121040620 -24548668 + MIR SINE MIR 60 173 -89 1666 152 23 26 chr10 121041463 121041583 -24547705 + AluJb SINE Alu 1 120 -192 222 62 0 0 chr10 121041583 121041615 -24547673 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 1666 152 23 26 chr10 121041615 121041804 -24547484 + AluJb SINE Alu 120 309 -3 2304 55 3 0 chr10 121041929 121042220 -24547068 + AluY SINE Alu 1 292 -19 430 159 58 0 chr10 121042476 121042545 -24546743 - AluS SINE Alu -244 74 2 511 296 100 35 chr10 121042548 121043257 -24546031 - L1ME4a LINE L1 -779 5367 4613 1061 145 0 0 chr10 121043269 121043435 -24545853 + AluSg/x SINE Alu 129 294 -18 388 329 18 12 chr10 121043439 121043606 -24545682 - L1ME4a LINE L1 -1538 4608 4441 22 58 0 43 chr10 121044128 121044197 -24545091 + AT_rich Low_complexity Low_complexity 1 66 0 362 290 45 23 chr10 121044247 121044423 -24544865 - L1ME4a LINE L1 -1900 4246 4067 1591 73 15 0 chr10 121044560 121044765 -24544523 + AluSg SINE Alu 1 208 -102 519 263 125 18 chr10 121045928 121046152 -24543136 + MIR SINE MIR 1 248 -14 1542 144 23 62 chr10 121046162 121046468 -24542820 + AluJo SINE Alu 1 294 -18 1998 118 34 0 chr10 121046741 121047037 -24542251 + AluSx SINE Alu 1 306 -6 672 285 63 57 chr10 121047254 121047635 -24541653 - L1MC4a LINE L1 -1850 5958 5572 2269 73 7 3 chr10 121047635 121047935 -24541353 + AluSp SINE Alu 1 301 -12 672 285 63 57 chr10 121047935 121048030 -24541258 - L1MC4a LINE L1 -2236 5572 5479 238 261 15 31 chr10 121048176 121048241 -24541047 + MIR SINE MIR 50 113 -149 258 220 17 17 chr10 121049673 121049732 -24539556 + CT-rich Low_complexity Low_complexity 2 60 0 200 59 29 0 chr10 121049806 121049840 -24539448 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 568 144 29 0 chr10 121049854 121049958 -24539330 + HY1 scRNA scRNA 1 107 -5 181 257 143 67 chr10 121049971 121050076 -24539212 - MIR SINE MIR -90 172 60 269 282 156 8 chr10 121050282 121050445 -24538843 + MIR SINE MIR 13 197 -65 225 179 36 0 chr10 121050726 121050782 -24538506 + L1MC4 LINE L1 7985 8042 0 694 175 123 6 chr10 121051539 121051710 -24537578 + L1MD3 LINE L1 7657 7847 -148 766 154 86 31 chr10 121051718 121051880 -24537408 + MLT1B LTR MaLR 1 171 -219 2132 116 0 3 chr10 121052425 121052736 -24536552 - AluSg SINE Alu 0 310 1 326 211 114 120 chr10 121055763 121055938 -24533350 - MIR SINE MIR -84 178 5 2089 92 3 14 chr10 121057156 121057450 -24531838 + AluSg SINE Alu 2 292 -18 237 213 200 13 chr10 121057545 121057695 -24531593 - Tigger8 DNA MER2_type -316 350 173 2018 126 3 10 chr10 121057846 121058139 -24531149 + AluSx SINE Alu 3 293 -19 223 245 94 0 chr10 121058732 121058785 -24530503 - L2 LINE L2 -5 3267 3210 288 284 8 82 chr10 121059422 121059556 -24529732 + MIR3 SINE MIR 42 165 -43 2344 79 0 0 chr10 121059623 121059915 -24529373 - AluY SINE Alu -19 292 1 1444 152 54 67 chr10 121060209 121060525 -24528763 + AluJo SINE Alu 1 312 0 1565 199 17 3 chr10 121060757 121061044 -24528244 - AluJb SINE Alu -20 292 2 2110 110 33 3 chr10 121061261 121061560 -24527728 - AluSx SINE Alu -4 308 1 2328 88 0 0 chr10 121061631 121061928 -24527360 - AluY SINE Alu -14 297 1 404 281 81 39 chr10 121062162 121062422 -24526866 + L1ME4a LINE L1 5634 5904 -217 581 206 10 0 chr10 121062489 121062591 -24526697 + FRAM SINE Alu 38 140 -36 595 218 34 20 chr10 121063430 121063657 -24525631 + L1ME LINE L1 10 4236 -1844 581 200 21 29 chr10 121063665 121063805 -24525483 + L1MD3 LINE L1 7371 7509 -486 378 237 124 4 chr10 121063991 121064128 -24525160 - MIR SINE MIR -27 181 27 638 130 106 75 chr10 121064608 121064769 -24524519 - LTR45B LTR ERV1 0 489 324 303 256 150 23 chr10 121065424 121065557 -24523731 - L2 LINE L2 -5 3308 3159 1443 107 15 0 chr10 121065866 121066062 -24523226 - AluSx SINE Alu -19 293 95 715 141 0 0 chr10 121066151 121066250 -24523038 - AluSx SINE Alu -210 102 4 826 171 0 0 chr10 121066301 121066430 -24522858 + FLAM_C SINE Alu 5 133 0 2011 136 7 0 chr10 121067121 121067408 -24521880 - AluJb SINE Alu -18 294 6 418 240 10 0 chr10 121067465 121067565 -24521723 - L1MC4 LINE L1 -482 7560 7460 304 298 14 28 chr10 121067574 121067715 -24521573 - L1MC4a LINE L1 -514 7294 7156 656 228 13 13 chr10 121068417 121068566 -24520722 - MIR SINE MIR 0 262 114 390 219 66 82 chr10 121069543 121069579 -24519709 - L1ME1 LINE L1 -92 6074 6039 2254 83 0 23 chr10 121069579 121069880 -24519408 + AluSq SINE Alu 1 294 -19 390 219 66 82 chr10 121069880 121070026 -24519262 - L1ME1 LINE L1 -127 6039 5895 189 0 0 0 chr10 121070027 121070048 -24519240 + (TG)n Simple_repeat Simple_repeat 2 22 0 3112 193 63 14 chr10 121070053 121070579 -24518709 - L1MB5 LINE L1 -36 6138 5477 2239 108 0 3 chr10 121070579 121070875 -24518413 - AluSc SINE Alu -14 295 1 3112 193 63 14 chr10 121070875 121071164 -24518124 - L1MB5 LINE L1 -697 5477 5204 1131 203 17 4 chr10 121071162 121071403 -24517885 - L1ME1 LINE L1 -289 5877 5634 * 360 339 17 0 chr10 121071677 121071792 -24517496 - MIR3 SINE MIR -5 203 87 231 243 286 29 chr10 121071951 121072091 -24517197 - MIR SINE MIR -66 196 21 232 271 119 25 chr10 121072526 121072644 -24516644 + L2 LINE L2 3179 3307 -6 291 28 0 0 chr10 121074603 121074639 -24514649 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 496 291 77 56 chr10 121077370 121077814 -24511474 + L1ME4a LINE L1 5667 6119 -2 460 318 45 23 chr10 121077972 121078148 -24511140 - MIR3 SINE MIR -27 181 2 741 190 0 0 chr10 121078844 121078960 -24510328 - FLAM_C SINE Alu -17 116 1 338 251 205 40 chr10 121080438 121080638 -24508650 - L1MC/D LINE L1 -467 5654 5547 679 251 47 31 chr10 121080686 121080877 -24508411 + MIR SINE MIR 35 228 -34 195 42 0 0 chr10 121080975 121080999 -24508289 + (TA)n Simple_repeat Simple_repeat 2 25 0 634 128 142 14 chr10 121082392 121082533 -24506755 + L1MC5 LINE L1 7767 7925 -36 2027 153 0 10 chr10 121082645 121082952 -24506336 + AluJo SINE Alu 1 304 -8 215 319 14 14 chr10 121082952 121083021 -24506267 - MIR SINE MIR -174 88 20 263 242 261 12 chr10 121083293 121083454 -24505834 + MIR SINE MIR 28 228 -34 204 40 0 0 chr10 121084688 121084713 -24504575 + (A)n Simple_repeat Simple_repeat 1 25 0 435 157 37 56 chr10 121084917 121085025 -24504263 - MIR SINE MIR -86 176 71 594 146 14 97 chr10 121085150 121085294 -24503994 - FLAM_C SINE Alu -1 132 1 390 329 85 12 chr10 121085531 121085695 -24503593 - MIR3 SINE MIR -26 182 7 304 157 96 139 chr10 121085760 121085831 -24503457 - MER96B DNA MER1_type? -12 405 339 1914 176 0 0 chr10 121085831 121086133 -24503155 - AluJb SINE Alu -10 302 1 304 157 96 139 chr10 121086133 121086176 -24503112 - MER96B DNA MER1_type? -78 339 296 31 0 0 0 chr10 121086210 121086241 -24503047 + AT_rich Low_complexity Low_complexity 1 31 0 195 208 42 21 chr10 121086312 121086360 -24502928 - L2 LINE L2 -91 3181 3133 35 41 0 0 chr10 121086684 121086733 -24502555 + AT_rich Low_complexity Low_complexity 1 49 0 1921 107 0 78 chr10 121086776 121087229 -24502059 + AluSx SINE Alu 1 429 0 21 36 0 0 chr10 121087258 121087286 -24502002 + AT_rich Low_complexity Low_complexity 1 28 0 212 250 0 16 chr10 121087558 121087622 -24501666 + MIR SINE MIR 199 261 -1 226 255 217 0 chr10 121087929 121088035 -24501253 + MIR SINE MIR 130 258 -4 282 277 107 18 chr10 121088058 121088170 -24501118 + MIR3 SINE MIR 3 124 -84 400 121 0 0 chr10 121088171 121088237 -24501051 - AluSp/q SINE Alu 0 313 248 183 114 0 0 chr10 121090244 121090279 -24499009 + (CGGGGG)n Simple_repeat Simple_repeat 3 37 0 22 56 0 0 chr10 121090597 121090633 -24498655 + GC_rich Low_complexity Low_complexity 1 36 0 322 253 25 13 chr10 121090963 121091042 -24498246 + HERV16 LTR ERVL 2802 2881 -2115 192 321 19 0 chr10 121091042 121091095 -24498193 + L2 LINE L2 2743 2796 -518 504 254 86 67 chr10 121091095 121091304 -24497984 - Charlie7 DNA MER1_type -2350 262 50 441 145 0 0 chr10 121091350 121091444 -24497844 - AluS SINE Alu 0 314 221 710 330 25 39 chr10 121091491 121091852 -24497436 + HERV16 LTR ERVL 3026 3381 -2273 1825 240 16 0 chr10 121091852 121092231 -24497057 - MLT1E2 LTR MaLR 0 626 242 382 213 177 43 chr10 121092338 121092502 -24496786 + MIR SINE MIR 65 250 -12 264 122 0 0 chr10 121092528 121092569 -24496719 + (CAT)n Simple_repeat Simple_repeat 1 41 0 2678 111 106 5 chr10 121092755 121093142 -24496146 - MSTC LTR MaLR -2 426 1 496 309 21 64 chr10 121093222 121093455 -24495833 + L2 LINE L2 3050 3272 0 299 359 77 0 chr10 121093611 121093767 -24495521 + MIR SINE MIR 92 259 -3 360 252 133 56 chr10 121094928 121095071 -24494217 - MIR SINE MIR -71 191 38 3542 223 59 46 chr10 121095533 121096555 -24492733 + L1MEc LINE L1 23 1057 -5339 1026 143 28 33 chr10 121096560 121096742 -24492546 + L1MC1 LINE L1 6153 6333 0 775 267 31 35 chr10 121096755 121097013 -24492275 + L1MEc LINE L1 1473 1729 -4667 463 302 87 12 chr10 121097111 121097283 -24492005 - MIR SINE MIR -69 193 9 310 310 195 15 chr10 121097998 121098198 -24491090 - MIR SINE MIR -12 250 15 449 266 41 47 chr10 121098316 121098485 -24490803 + MIR SINE MIR 7 174 -88 531 301 0 7 chr10 121098538 121098674 -24490614 + MIR SINE MIR 6 140 -122 569 288 13 52 chr10 121099214 121099443 -24489845 + L1MC4a LINE L1 6442 6624 -1184 290 215 31 0 chr10 121099503 121099568 -24489720 - L1MC4 LINE L1 -142 7900 7834 1038 186 30 5 chr10 121099620 121099819 -24489469 - AluJo SINE Alu -28 284 81 1780 194 97 53 chr10 121099830 121100083 -24489205 - L1MC4 LINE L1 -232 7810 7569 2069 89 3 54 chr10 121100083 121100396 -24488892 + AluSx SINE Alu 1 297 -15 1780 194 97 53 chr10 121100396 121100648 -24488640 - L1MC4 LINE L1 -473 7569 7283 353 371 24 19 chr10 121100648 121100853 -24488435 - L2 LINE L2 -679 2635 2430 4410 124 5 3 chr10 121100867 121101489 -24487799 + L1PA13 LINE L1 5538 6160 -3 2681 221 73 32 chr10 121101489 121101821 -24487467 + L1ME2 LINE L1 4622 4939 -1225 1708 124 93 0 chr10 121101821 121102140 -24487148 + AluSx SINE Alu 1 343 0 2681 221 73 32 chr10 121102140 121103180 -24486108 + L1ME2 LINE L1 4939 6054 -110 1043 230 124 45 chr10 121103154 121103533 -24485755 - L1ME LINE L1 -485 5677 5269 * 409 279 0 10 chr10 121103634 121103738 -24485550 - AluJ SINE Alu -208 104 2 588 210 58 136 chr10 121103907 121104027 -24485261 + L2 LINE L2 3028 3156 -157 3981 108 19 4 chr10 121104027 121104545 -24484743 + MER1A DNA MER1_type 2 527 0 588 210 58 136 chr10 121104545 121104734 -24484554 + L2 LINE L2 3156 3313 0 534 230 126 31 chr10 121105084 121105306 -24483982 + L1MC4a LINE L1 5722 5964 -1844 2259 101 3 3 chr10 121105348 121105645 -24483643 + AluSx SINE Alu 1 297 -15 904 236 34 13 chr10 121106181 121106414 -24482874 + L1MC4a LINE L1 5536 5773 -2035 1894 148 27 3 chr10 121106581 121106878 -24482410 - AluSx SINE Alu -8 304 1 1521 288 102 40 chr10 121106950 121108062 -24481226 + L1MC4a LINE L1 5797 6977 -831 1533 120 0 0 chr10 121108085 121108293 -24480995 + AluSq SINE Alu 1 208 -105 1199 219 14 14 chr10 121108430 121108708 -24480580 + AluJb SINE Alu 1 278 -34 270 0 0 0 chr10 121109054 121109084 -24480204 + (TG)n Simple_repeat Simple_repeat 1 30 0 523 232 65 19 chr10 121109733 121109888 -24479400 + MIR SINE MIR 25 186 -76 1370 263 84 17 chr10 121110059 121110477 -24478811 - MLT1H1 LTR MaLR -5 550 105 903 131 35 0 chr10 121110591 121110736 -24478552 - MLT2A2 LTR ERVL -303 150 1 203 303 67 25 chr10 121111631 121111750 -24477538 - MIR SINE MIR -93 169 46 2120 124 3 0 chr10 121112418 121112709 -24476579 - AluSx SINE Alu -20 292 1 2034 155 55 17 chr10 121112756 121113117 -24476171 - THE1C LTR MaLR 0 375 1 431 316 68 19 chr10 121113551 121113757 -24475531 - MIR SINE MIR -1 261 46 242 225 22 79 chr10 121115337 121115426 -24473862 - L1ME4a LINE L1 -51 6070 5987 1128 183 83 13 chr10 121115591 121115821 -24473467 - MLT1D LTR MaLR -259 246 1 243 300 56 0 chr10 121115821 121115911 -24473377 + MIR3 SINE MIR 91 185 -23 2305 71 0 3 chr10 121116057 121116381 -24472907 - AluY SINE Alu 0 323 1 838 216 135 14 chr10 121116415 121116623 -24472665 - MIR SINE MIR -17 245 13 223 299 126 11 chr10 121116678 121116765 -24472523 + L2 LINE L2 3140 3236 -36 478 209 0 38 chr10 121116874 121116979 -24472309 - MIR SINE MIR -76 186 86 414 246 147 12 chr10 121117109 121117282 -24472006 - MIR SINE MIR -3 259 61 187 143 57 0 chr10 121117324 121117359 -24471929 + MIR SINE MIR 114 150 -58 629 208 7 39 chr10 121117381 121117535 -24471753 - MIR SINE MIR -5 257 109 399 237 41 0 chr10 121118075 121118172 -24471116 + L2 LINE L2 3197 3297 -16 189 0 0 0 chr10 121118182 121118203 -24471085 + (TGAA)n Simple_repeat Simple_repeat 4 24 0 523 157 194 0 chr10 121118487 121118595 -24470693 - L1MB2 LINE L1 -7 6164 6036 374 145 209 58 chr10 121119020 121119192 -24470096 - MER5C DNA MER1_type 0 324 127 237 65 0 0 chr10 121119553 121119584 -24469704 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 670 116 63 0 chr10 121119586 121119681 -24469607 - AluJo SINE Alu -30 282 182 22 35 0 0 chr10 121122370 121122399 -24466889 + AT_rich Low_complexity Low_complexity 1 29 0 599 197 16 0 chr10 121122622 121122744 -24466544 - MER5C DNA MER1_type -200 124 1 303 250 24 12 chr10 121122833 121122917 -24466371 + MIR SINE MIR 157 241 -21 239 273 114 11 chr10 121123119 121123207 -24466081 - MER91B DNA MER1_type -43 97 1 765 342 6 25 chr10 121123989 121124088 -24465200 + LTR16C LTR ERVL 175 274 -217 2394 115 45 31 chr10 121124088 121124445 -24464843 + THE1B LTR MaLR 3 364 0 765 342 6 25 chr10 121124445 121124664 -24464624 + LTR16C LTR ERVL 274 487 -4 2061 109 3 7 chr10 121124712 121125035 -24464253 - AluSq SINE Alu 0 322 1 678 247 22 6 chr10 121125251 121125430 -24463858 + L1MC/D LINE L1 5341 5517 -634 826 311 86 12 chr10 121125430 121125768 -24463520 - L2 LINE L2 -2 3311 2949 1001 193 36 16 chr10 121125820 121126069 -24463219 + L1M4 LINE L1 5077 5330 -816 1234 198 9 0 chr10 121126069 121126286 -24463002 + AluJb SINE Alu 1 219 -93 952 182 91 5 chr10 121126388 121126575 -24462713 - AluJo SINE Alu -109 203 1 204 40 0 0 chr10 121126591 121126616 -24462672 + (A)n Simple_repeat Simple_repeat 1 25 0 1559 239 213 19 chr10 121126621 121127252 -24462036 + L1MC4 LINE L1 6867 7374 -668 2164 99 38 0 chr10 121127252 121127545 -24461743 + AluSp SINE Alu 1 304 -9 1559 239 213 19 chr10 121127545 121127778 -24461510 + L1MC4 LINE L1 7374 7899 -143 1369 204 118 5 chr10 121127897 121128280 -24461008 + Charlie4a DNA MER1_type 3 428 -80 23 0 0 0 chr10 121128314 121128337 -24460951 + AT_rich Low_complexity Low_complexity 1 23 0 308 213 75 0 chr10 121128337 121128417 -24460871 + Charlie4a DNA MER1_type 423 508 0 1951 143 3 17 chr10 121128528 121128829 -24460459 - AluSx SINE Alu -15 297 1 2244 110 0 0 chr10 121128949 121129241 -24460047 - AluSx SINE Alu -20 292 1 720 296 37 25 chr10 121129659 121129902 -24459386 + MIR SINE MIR 1 246 -16 2054 131 3 3 chr10 121130252 121130549 -24458739 - AluSx SINE Alu -15 297 1 228 191 88 15 chr10 121130563 121130631 -24458657 - MER45B DNA AcHobo -694 346 274 435 191 0 0 chr10 121131145 121131208 -24458080 - FLAM_A SINE Alu -75 67 5 217 223 89 116 chr10 121131224 121131336 -24457952 + L2 LINE L2 3137 3245 -27 344 167 256 0 chr10 121131579 121131657 -24457631 - FLAM_A SINE Alu -22 111 14 22 0 0 0 chr10 121132932 121132954 -24456334 + AT_rich Low_complexity Low_complexity 1 22 0 506 224 5 132 chr10 121132969 121133174 -24456114 + L1ME1 LINE L1 5942 6120 -46 378 132 9 293 chr10 121133055 121133267 -24456021 + L1MA10 LINE L1 6181 6332 -2 * 1177 45 0 0 chr10 121133291 121133423 -24455865 - AluY SINE Alu -179 132 1 247 346 19 9 chr10 121133857 121133964 -24455324 - L2 LINE L2 -1 3312 3205 2164 85 14 0 chr10 121134659 121134942 -24454346 + AluSx SINE Alu 3 289 -23 2153 104 3 0 chr10 121135517 121135806 -24453482 + AluY SINE Alu 1 290 -21 29 60 0 0 chr10 121135818 121135868 -24453420 + AT_rich Low_complexity Low_complexity 1 50 0 481 190 10 0 chr10 121135889 121135989 -24453299 + L1MC4 LINE L1 7561 7661 -381 2187 101 3 7 chr10 121136026 121136322 -24452966 + AluSg1 SINE Alu 3 297 -12 1660 111 123 11 chr10 121136333 121136594 -24452694 + AluSg1 SINE Alu 1 290 -19 1623 169 17 20 chr10 121136688 121136983 -24452305 + AluJb SINE Alu 1 294 -18 1528 154 158 12 chr10 121138421 121138680 -24450608 + AluJb SINE Alu 1 297 -5 1562 187 4 0 chr10 121138680 121138937 -24450351 + AluJb SINE Alu 36 293 -19 889 101 78 0 chr10 121139848 121139977 -24449311 + MER85 DNA T2_type 1 139 0 2306 97 7 3 chr10 121140096 121140396 -24448892 + AluSx SINE Alu 1 301 -11 1269 179 9 9 chr10 121140798 121141022 -24448266 - MER46A DNA MER2_type -1 235 12 1293 101 66 0 chr10 121141330 121141528 -24447760 + MER2 DNA MER2_type 1 211 -134 31 0 0 0 chr10 121141554 121141585 -24447703 + AT_rich Low_complexity Low_complexity 1 31 0 637 256 171 32 chr10 121141865 121142146 -24447142 - L2 LINE L2 0 3313 2994 2189 102 3 0 chr10 121143240 121143533 -24445755 + AluSg SINE Alu 1 294 -16 775 174 35 0 chr10 121143538 121143653 -24445635 + AluSq/x SINE Alu 2 120 -193 454 242 20 0 chr10 121144213 121144312 -24444976 - U13 snRNA snRNA -2 102 2 1147 185 34 13 chr10 121144354 121144641 -24444647 + MER47A DNA MER2_type 1 365 -1 22 0 0 0 chr10 121145211 121145233 -24444055 + AT_rich Low_complexity Low_complexity 1 22 0 2209 248 203 21 chr10 121147043 121148024 -24441264 + L1MC4 LINE L1 6883 8041 -1 26 0 0 0 chr10 121148282 121148308 -24440980 + AT_rich Low_complexity Low_complexity 1 26 0 244 211 158 11 chr10 121148905 121149000 -24440288 + L1ME4a LINE L1 5999 6107 -14 887 210 18 7 chr10 121149819 121150086 -24439202 + MLT1B LTR MaLR 43 390 0 400 167 61 26 chr10 121150316 121150401 -24438887 - MIR SINE MIR -70 192 105 1084 98 47 67 chr10 121150427 121150620 -24438668 - L1PA5 LINE L1 0 6154 5966 300 271 141 94 chr10 121151763 121152146 -24437142 + L1M2 LINE L1 747 1147 -5702 2053 90 7 4 chr10 121153413 121153691 -24435597 + AluSx SINE Alu 12 290 -22 308 83 42 0 chr10 121153732 121153780 -24435508 - Alu SINE Alu -4 298 249 294 98 22 0 chr10 121153891 121153943 -24435345 - Alu SINE Alu -254 47 2 193 167 56 74 chr10 121153945 121153999 -24435289 + L3 LINE CR1 1523 1575 -2 2065 106 21 3 chr10 121154020 121154302 -24434986 + AluSq SINE Alu 3 289 -24 22 0 0 0 chr10 121154302 121154324 -24434964 + AT_rich Low_complexity Low_complexity 1 22 0 509 318 12 0 chr10 121154334 121154504 -24434784 - MIR SINE MIR 0 262 91 181 256 93 35 chr10 121155362 121155448 -24433840 + L3 LINE CR1 1248 1338 -239 5838 146 40 22 chr10 121155564 121156273 -24433015 + L1MA4 LINE L1 4592 5287 -1013 2403 77 0 0 chr10 121156273 121156573 -24432715 + AluY SINE Alu 1 300 -11 5838 146 40 22 chr10 121156573 121157524 -24431764 + L1MA4 LINE L1 5287 6290 -10 346 326 43 0 chr10 121157730 121157868 -24431420 + L3 LINE CR1 1328 1471 -106 183 350 90 10 chr10 121158233 121158333 -24430955 + L2 LINE L2 3107 3214 -58 228 135 0 0 chr10 121158971 121159008 -24430280 + (T)n Simple_repeat Simple_repeat 1 37 0 595 164 190 0 chr10 121159053 121159169 -24430119 + AluJo SINE Alu 2 139 -173 1856 115 79 4 chr10 121159703 121159982 -24429306 + AluSg SINE Alu 1 300 -10 247 244 146 27 chr10 121160169 121160289 -24428999 + MIR SINE MIR 20 151 -79 823 184 13 13 chr10 121160490 121160642 -24428646 + AluJo SINE Alu 137 288 -14 1827 150 24 0 chr10 121160682 121160976 -24428312 + AluSx SINE Alu 1 301 -11 2091 105 3 3 chr10 121160980 121161275 -24428013 + AluSq SINE Alu 5 299 -14 361 274 203 20 chr10 121161328 121161481 -24427807 + L2 LINE L2 2795 2975 -339 1924 169 57 36 chr10 121161514 121161898 -24427390 + MLT1E1 LTR MaLR 1 392 -262 2160 124 0 0 chr10 121162275 121162581 -24426707 - AluSg SINE Alu 0 310 5 710 237 56 47 chr10 121164504 121164719 -24424569 - MIR SINE MIR -45 217 1 839 248 86 5 chr10 121164779 121165001 -24424287 + MIR SINE MIR 22 261 -1 249 272 123 9 chr10 121269205 121269319 -24319969 - MIR SINE MIR -112 150 24 2158 97 27 17 chr10 121269710 121270009 -24319279 + AluSp SINE Alu 1 302 -11 183 354 0 0 chr10 121270269 121270317 -24318971 - L2 LINE L2 -91 3181 3134 227 246 8 12 chr10 121270799 121270918 -24318370 - MIR SINE MIR -55 207 46 280 204 0 68 chr10 121271035 121271123 -24318165 + MIR SINE MIR 106 187 -75 855 204 134 30 chr10 121271389 121271620 -24317668 + MER77 LTR ERV1 53 307 -298 3353 57 0 0 chr10 121271628 121272032 -24317256 + L1PA8 LINE L1 5607 6010 -162 248 222 48 16 chr10 121272240 121272303 -24316985 - MIR SINE MIR -65 143 79 1724 228 51 26 chr10 121272316 121272405 -24316883 + MER97a DNA MER1_type? 36 121 -773 2162 133 3 3 chr10 121272405 121272713 -24316575 - AluSx SINE Alu -4 308 1 1724 228 51 26 chr10 121272713 121273115 -24316173 + MER97a DNA MER1_type? 121 539 -355 763 244 56 0 chr10 121273111 121273324 -24315964 + MER97a DNA MER1_type? 661 885 -9 * 3734 163 27 42 chr10 121273981 121274379 -24314909 + L1MD2 LINE L1 5529 5914 -445 2090 152 0 0 chr10 121274379 121274682 -24314606 - AluSx SINE Alu -9 303 1 3734 163 27 42 chr10 121274682 121275068 -24314220 + L1MD2 LINE L1 5914 6304 -55 2216 112 6 16 chr10 121275105 121275419 -24313869 - AluSq SINE Alu -2 311 1 301 133 50 0 chr10 121275422 121275482 -24313806 + L1MD2 LINE L1 6295 6357 -2 228 86 0 0 chr10 121275497 121275532 -24313756 + (A)n Simple_repeat Simple_repeat 1 35 0 810 256 27 0 chr10 121275570 121275789 -24313499 - MIR SINE MIR -10 252 28 1106 206 114 15 chr10 121275968 121276125 -24313163 - AluJo SINE Alu -13 289 149 216 0 0 0 chr10 121276125 121276149 -24313139 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1106 206 114 15 chr10 121276149 121276253 -24313035 - AluJo SINE Alu -153 149 2 2193 123 3 0 chr10 121277468 121277778 -24311510 - AluSx SINE Alu -1 311 1 575 315 93 4 chr10 121277811 121278081 -24311207 + MLT1L LTR MaLR 322 615 0 1939 204 3 0 chr10 121278354 121278697 -24310591 + Tigger7 DNA MER2_type 1 344 -2143 1079 90 0 39 chr10 121278692 121278847 -24310441 + Tigger7 DNA MER2_type 2343 2491 0 * 1960 143 0 32 chr10 121279092 121279407 -24309881 + AluSx SINE Alu 1 305 -7 2629 52 0 3 chr10 121280457 121280767 -24308521 + AluY SINE Alu 1 309 -2 208 239 0 42 chr10 121280871 121280942 -24308346 - L2 LINE L2 -248 3065 2998 213 222 37 0 chr10 121281147 121281201 -24308087 + L2 LINE L2 3195 3250 -22 386 257 162 73 chr10 121281288 121281560 -24307728 - MER102a DNA MER1_type 0 330 35 586 259 63 11 chr10 121281651 121281840 -24307448 + L1ME3 LINE L1 5943 6141 -21 579 187 139 12 chr10 121282527 121282693 -24306595 - MER5A DNA MER1_type -2 187 1 22 0 0 0 chr10 121284934 121284956 -24304332 + AT_rich Low_complexity Low_complexity 1 22 0 6991 216 55 24 chr10 121285144 121285727 -24303561 + L1MB4 LINE L1 3391 3954 -2226 207 0 0 0 chr10 121285727 121285750 -24303538 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 6991 216 55 24 chr10 121285750 121287281 -24302007 + L1MB4 LINE L1 3954 5435 -745 1563 193 56 39 chr10 121287281 121287638 -24301650 - MLT1A1 LTR MaLR -2 363 1 6991 216 55 24 chr10 121287638 121288167 -24301121 + L1MB4 LINE L1 5435 6128 -52 1911 174 0 0 chr10 121288167 121288471 -24300817 - AluJo SINE Alu -8 304 1 6991 216 55 24 chr10 121288471 121288526 -24300762 + L1MB4 LINE L1 6128 6180 0 506 268 62 10 chr10 121289163 121289357 -24299931 + L2 LINE L2 3101 3304 -9 966 152 6 12 chr10 121289398 121289569 -24299719 + L1MD1 LINE L1 6073 6242 0 1590 179 49 39 chr10 121289573 121289959 -24299329 + L1MD3 LINE L1 7590 7979 -16 1081 246 31 28 chr10 121290122 121290439 -24298849 - MER46C DNA MER2_type -17 321 4 471 35 0 0 chr10 121290542 121290599 -24298689 + (CA)n Simple_repeat Simple_repeat 2 58 0 407 238 119 49 chr10 121290608 121290751 -24298537 + L1ME3A LINE L1 5992 6144 -26 291 200 107 0 chr10 121290886 121290961 -24298327 - MIR SINE MIR -98 110 28 2405 101 7 0 chr10 121291530 121291838 -24297450 - AluSx SINE Alu -2 310 1 802 196 6 6 chr10 121291952 121292110 -24297178 - FRAM SINE Alu -12 164 7 302 246 23 53 chr10 121292446 121292577 -24296711 - MIR SINE MIR -62 146 57 2300 101 3 0 chr10 121294145 121294480 -24294808 - AluSx SINE Alu 0 312 5 2160 131 123 26 chr10 121295697 121296044 -24293244 - MSTC LTR MaLR 0 428 38 2451 81 0 0 chr10 121296044 121296351 -24292937 - AluY SINE Alu -4 307 1 2160 131 123 26 chr10 121296351 121296393 -24292895 - MSTC LTR MaLR -390 38 1 416 265 71 46 chr10 121296674 121296870 -24292418 - L2 LINE L2 -1 3312 3112 283 314 64 58 chr10 121297308 121297464 -24291824 + MIR3 SINE MIR 39 195 -13 325 274 55 91 chr10 121297719 121297938 -24291350 + MIR SINE MIR 48 258 -4 2067 138 10 6 chr10 121297942 121298253 -24291035 - AluJo SINE Alu 0 312 1 207 289 0 36 chr10 121299586 121299669 -24289619 + CT-rich Low_complexity Low_complexity 1 80 0 1874 147 2 86 chr10 121300378 121300609 -24288679 - L1MD3 LINE L1 -10 7985 7799 2283 118 0 6 chr10 121300609 121300924 -24288364 - AluSq SINE Alu 0 313 1 1874 147 2 86 chr10 121300924 121301088 -24288200 - L1MD3 LINE L1 -196 7799 7623 871 271 9 5 chr10 121301098 121301312 -24287976 - MER58A DNA MER1_type -9 215 1 1454 211 152 20 chr10 121301312 121301804 -24287484 - L1MC4a LINE L1 -350 7458 6902 559 215 114 7 chr10 121302190 121302339 -24286949 + L1MA3 LINE L1 6141 6305 0 926 192 11 11 chr10 121302399 121302576 -24286712 + MER45A DNA AcHobo 1 177 -1 1745 149 19 29 chr10 121303859 121304168 -24285120 - AluJo SINE Alu -6 306 1 287 302 32 8 chr10 121304620 121304746 -24284542 - MIR SINE MIR -1 261 133 1843 92 21 0 chr10 121305418 121305657 -24283631 + AluSg/x SINE Alu 67 310 -2 2180 108 0 0 chr10 121306784 121307063 -24282225 + AluSx SINE Alu 1 279 -33 207 313 48 0 chr10 121307646 121307729 -24281559 + MIR3 SINE MIR 108 194 -14 355 308 37 22 chr10 121307963 121308175 -24281113 - MIR3 SINE MIR -41 221 11 2091 134 3 0 chr10 121309267 121309574 -24279714 + AluSx SINE Alu 3 310 -2 678 201 55 168 chr10 121309839 121310256 -24279032 - MLT1I LTR MaLR -6 403 34 2023 121 16 16 chr10 121310931 121311236 -24278052 + AluY SINE Alu 1 305 -6 227 280 41 33 chr10 121311860 121311950 -24277338 + MIR SINE MIR 21 113 -95 660 293 100 60 chr10 121311978 121312527 -24276761 + MLT1K LTR MaLR 5 575 -13 333 208 56 0 chr10 121312934 121313006 -24276282 + L1MA5 LINE L1 6225 6300 0 252 0 0 0 chr10 121313025 121313053 -24276235 + (A)n Simple_repeat Simple_repeat 1 28 0 1912 137 17 3 chr10 121313053 121313353 -24275935 + AluSq SINE Alu 1 304 -9 541 237 74 7 chr10 121313372 121313507 -24275781 + MER77 LTR ERV1 458 601 -4 299 296 96 16 chr10 121313574 121313699 -24275589 - MIR SINE MIR -71 191 57 330 330 46 0 chr10 121316068 121316177 -24273111 + MIR SINE MIR 18 131 -131 2034 155 23 9 chr10 121316406 121316755 -24272533 + L1MB7 LINE L1 5287 5640 -538 1357 147 38 30 chr10 121316756 121317021 -24272267 + L1MB7 LINE L1 5911 6177 -7 2097 127 0 0 chr10 121317066 121317366 -24271922 - AluSx SINE Alu -12 300 1 2034 129 6 10 chr10 121317639 121317950 -24271338 + L1MC1 LINE L1 6024 6333 0 2325 196 16 17 chr10 121318611 121319136 -24270152 + Tigger7 DNA MER2_type 9 2485 -2 542 325 41 32 chr10 121319158 121319499 -24269789 - L1MC4a LINE L1 -1876 5932 5589 1770 150 60 74 chr10 121320560 121320705 -24268583 + MLT1A1 LTR MaLR 1 146 -219 2210 95 0 7 chr10 121320705 121321010 -24268278 + AluSq SINE Alu 1 303 -10 1770 150 60 74 chr10 121321010 121321231 -24268057 + MLT1A1 LTR MaLR 146 362 -3 1953 221 37 28 chr10 121321243 121321751 -24267537 - L1ME3A LINE L1 -37 6133 5621 271 319 28 14 chr10 121321826 121321898 -24267390 - L2 LINE L2 -35 3237 3165 1695 130 29 21 chr10 121321993 121322404 -24266884 - LTR46 LTR ERV1 0 460 1 439 232 0 80 chr10 121323117 121323242 -24266046 - L2 LINE L2 -5 3308 3194 255 307 163 32 chr10 121325160 121325443 -24263845 + L2 LINE L2 2260 2579 -735 180 293 85 24 chr10 121325909 121325991 -24263297 + L3 LINE CR1 1488 1574 -3 363 274 71 9 chr10 121327035 121327148 -24262140 - MIR SINE MIR -54 208 89 227 114 23 0 chr10 121327349 121327393 -24261895 + (CA)n Simple_repeat Simple_repeat 2 46 0 2002 139 3 0 chr10 121327418 121327727 -24261561 - AluSx SINE Alu -2 310 1 587 286 66 31 chr10 121327838 121328065 -24261223 + MIR SINE MIR 3 237 -25 197 265 41 0 chr10 121328032 121328081 -24261207 + L2 LINE L2 3209 3259 -13 * 889 202 22 6 chr10 121328291 121328474 -24260814 + MER5A DNA MER1_type 1 186 -3 257 302 57 6 chr10 121329069 121329228 -24260060 + LTR33A LTR ERVL 24 190 -333 265 269 77 0 chr10 121329307 121329385 -24259903 + LTR33A LTR ERVL 436 519 -4 251 394 77 12 chr10 121329390 121329560 -24259728 + L2 LINE L2 3089 3269 -3 328 252 174 0 chr10 121329764 121329879 -24259409 - MLT1H LTR MaLR -16 533 399 785 246 38 6 chr10 121329943 121330193 -24259095 - MLT1H LTR MaLR -244 305 5 836 207 30 10 chr10 121330803 121331001 -24258287 + L1MD3 LINE L1 7784 7985 -10 218 364 87 2 chr10 121331405 121331546 -24257742 - MIR SINE MIR -65 143 16 279 54 0 0 chr10 121332477 121332514 -24256774 + (TC)n Simple_repeat Simple_repeat 2 38 0 852 201 89 47 chr10 121332526 121332740 -24256548 - L1MB5 LINE L1 -17 6157 5935 502 324 81 16 chr10 121332838 121333282 -24256006 + L1M4 LINE L1 3999 4471 -1675 362 301 64 18 chr10 121333591 121333810 -24255478 + L1M4 LINE L1 4918 5146 -1000 270 274 67 52 chr10 121334125 121334260 -24255028 + MIR3 SINE MIR 57 193 -15 185 200 178 0 chr10 121334777 121334822 -24254466 + MIR3 SINE MIR 107 159 -49 1563 181 25 0 chr10 121335120 121335401 -24253887 + LTR64 LTR ERVK 1 288 -270 201 307 40 13 chr10 121335416 121335491 -24253797 + MIR SINE MIR 88 164 -98 4269 133 15 0 chr10 121335689 121336348 -24252940 - L1MC1 LINE L1 0 6333 5665 344 59 20 0 chr10 121336707 121336758 -24252530 + (TA)n Simple_repeat Simple_repeat 2 53 0 2172 74 25 0 chr10 121336758 121337043 -24252245 - AluSg SINE Alu -17 293 2 245 314 106 16 chr10 121337233 121337421 -24251867 - L1MEd LINE L1 -4576 1734 1530 1827 206 43 45 chr10 121337429 121337920 -24251368 - MLT1D LTR MaLR 0 505 16 612 296 80 31 chr10 121337952 121338500 -24250788 - L1MEd LINE L1 -4810 1500 895 361 269 161 103 chr10 121338604 121339050 -24250238 - L1MEd LINE L1 -5327 792 321 21 36 0 0 chr10 121339354 121339382 -24249906 + AT_rich Low_complexity Low_complexity 1 28 0 204 339 0 0 chr10 121340109 121340168 -24249120 - L2 LINE L2 -8 3264 3206 355 274 53 18 chr10 121340270 121340383 -24248905 + 7SK RNA RNA 3 119 -74 469 191 52 124 chr10 121341733 121341827 -24247461 - L2 LINE L2 -2 3311 3237 1930 133 13 0 chr10 121341827 121342128 -24247160 - AluJb SINE Alu -7 305 1 469 191 52 124 chr10 121342128 121342227 -24247061 - L2 LINE L2 -76 3237 3132 192 333 72 0 chr10 121342354 121342423 -24246865 - L2 LINE L2 -267 3046 2973 818 196 38 0 chr10 121342461 121342619 -24246669 + MER3 DNA MER1_type 46 209 0 213 204 41 0 chr10 121343239 121343288 -24246000 + A-rich Low_complexity Low_complexity 1 51 0 1926 121 13 32 chr10 121344237 121344552 -24244736 - AluSg SINE Alu -1 309 1 35 54 0 0 chr10 121344567 121344623 -24244665 + AT_rich Low_complexity Low_complexity 1 56 0 6301 28 12 3 chr10 121344752 121345496 -24243792 + SVA Other Other 635 1385 -1 204 125 0 0 chr10 121347527 121347559 -24241729 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 976 156 73 21 chr10 121347804 121347996 -24241292 + MER20 DNA MER1_type 14 215 -4 216 0 0 0 chr10 121348046 121348070 -24241218 + (A)n Simple_repeat Simple_repeat 1 24 0 254 225 50 75 chr10 121349440 121349520 -24239768 - L2 LINE L2 -4 3268 3191 335 310 65 26 chr10 121349542 121349697 -24239591 - MIR SINE MIR -32 230 70 921 97 0 0 chr10 121349768 121349892 -24239396 - AluSq/x SINE Alu -184 129 6 184 305 34 0 chr10 121350227 121350286 -24239002 + MIR SINE MIR 33 93 -115 273 261 184 43 chr10 121350350 121350584 -24238704 + L1ME4a LINE L1 5799 6065 -56 628 167 0 0 chr10 121350590 121350680 -24238608 - 5S rRNA rRNA -31 90 1 2112 111 6 16 chr10 121350694 121351010 -24238278 - AluSq SINE Alu 0 313 1 23 0 0 0 chr10 121351036 121351059 -24238229 + AT_rich Low_complexity Low_complexity 1 23 0 6762 14 0 6 chr10 121351162 121351990 -24237298 - L1PA2 LINE L1 -144 6011 5189 1995 132 3 3 chr10 121352609 121352913 -24236375 - AluSq SINE Alu -9 304 1 337 263 132 0 chr10 121353363 121353477 -24235811 - L1ME4a LINE L1 -5 6116 5988 443 324 101 42 chr10 121353618 121353965 -24235323 + L1MC4a LINE L1 4930 5293 -853 730 313 163 11 chr10 121354038 121354604 -24234684 + L1MC4a LINE L1 5258 5909 -1899 280 293 53 53 chr10 121354783 121354933 -24234355 - MIR SINE MIR -111 151 2 200 256 0 115 chr10 121355865 121355943 -24233345 + L2 LINE L2 3147 3215 -57 931 177 57 10 chr10 121356101 121356293 -24232995 + AluJb SINE Alu 90 290 -22 1243 175 60 4 chr10 121356308 121356577 -24232711 - Cheshire DNA MER1_type -61 2359 2076 571 182 220 0 chr10 121356571 121356703 -24232585 - Cheshire DNA MER1_type -2259 161 1 * 201 129 0 0 chr10 121356731 121356762 -24232526 + (TC)n Simple_repeat Simple_repeat 2 32 0 376 267 35 26 chr10 121357304 121357420 -24231868 - L2 LINE L2 0 3313 3197 367 250 68 45 chr10 121357705 121357837 -24231451 + MER91C DNA MER1_type 1 135 -5 808 185 185 0 chr10 121357907 121358058 -24231230 - Charlie1a DNA MER1_type -1276 179 1 634 296 101 24 chr10 121358059 121358346 -24230942 - MLT1K LTR MaLR -268 320 12 310 292 14 28 chr10 121358962 121359106 -24230182 + L2 LINE L2 1954 2095 -1219 2010 130 3 0 chr10 121359452 121359753 -24229535 - AluSx SINE Alu -10 302 1 482 215 43 31 chr10 121360068 121360231 -24229057 + MER104 DNA Tc2 14 178 -2 202 333 0 0 chr10 121360779 121360842 -24228446 + (CA)n Simple_repeat Simple_repeat 1 63 0 234 276 172 45 chr10 121362802 121362936 -24226352 - L2 LINE L2 0 3272 3122 2257 60 0 0 chr10 121362973 121363239 -24226049 + AluY SINE Alu 39 304 -7 347 351 73 20 chr10 121363320 121363568 -24225720 - L2 LINE L2 -208 3064 2804 253 317 50 10 chr10 121363838 121363939 -24225349 - MIR SINE MIR -71 137 33 724 253 28 11 chr10 121365363 121365541 -24223747 + MIR SINE MIR 2 182 -80 473 250 43 38 chr10 121366149 121366333 -24222955 + MER5A DNA MER1_type 1 185 -4 522 316 33 0 chr10 121366447 121366599 -24222689 + MIR3 SINE MIR 37 193 -15 1852 176 17 7 chr10 121366723 121367025 -24222263 + AluJo SINE Alu 2 306 -6 328 191 88 0 chr10 121367301 121367369 -24221919 + MER91C DNA MER1_type 31 104 -36 2504 77 0 3 chr10 121367955 121368255 -24221033 - AluSc SINE Alu -8 301 3 24 0 0 0 chr10 121369327 121369351 -24219937 + AT_rich Low_complexity Low_complexity 1 24 0 1568 99 97 15 chr10 121369897 121370309 -24218979 - LTR54 LTR ERV1 -2 508 1 225 289 0 24 chr10 121371914 121371997 -24217291 + GA-rich Low_complexity Low_complexity 1 81 0 213 108 0 0 chr10 121372185 121372222 -24217066 + (CAG)n Simple_repeat Simple_repeat 3 39 0 308 229 43 14 chr10 121372523 121372563 -24216725 - L1ME4a LINE L1 -18 6103 6059 2452 77 6 3 chr10 121372563 121372874 -24216414 + AluSp SINE Alu 2 313 0 308 229 43 14 chr10 121372874 121372903 -24216385 - L1ME4a LINE L1 -62 6059 6032 333 271 10 10 chr10 121372907 121373003 -24216285 - MIR SINE MIR -1 261 166 524 306 181 0 chr10 121373443 121373659 -24215629 + MIR SINE MIR 8 262 0 247 325 8 57 chr10 121373668 121373791 -24215497 + MIR SINE MIR 76 148 -60 2358 106 0 0 chr10 121374786 121375088 -24214200 - AluSg SINE Alu -8 302 1 222 264 0 19 chr10 121375148 121375201 -24214087 + MIR3 SINE MIR 152 203 -5 356 371 40 13 chr10 121375490 121375641 -24213647 + MIR3 SINE MIR 6 160 -48 261 313 80 55 chr10 121375655 121375818 -24213470 - MER5B DNA MER1_type -6 172 6 734 194 40 11 chr10 121376105 121376280 -24213008 + MER104 DNA MER2_type 1 180 0 645 272 42 31 chr10 121376291 121376482 -24212806 + L2 LINE L2 3120 3312 -1 225 0 0 0 chr10 121376505 121376530 -24212758 + (T)n Simple_repeat Simple_repeat 1 25 0 263 279 164 8 chr10 121376803 121376925 -24212363 - L2 LINE L2 -302 2970 2830 386 227 44 47 chr10 121377199 121377353 -24211935 + MIR SINE MIR 33 180 -67 231 241 38 25 chr10 121378066 121378145 -24211143 + MIR3 SINE MIR 82 161 -47 283 60 40 0 chr10 121379339 121379389 -24209899 + (CAAA)n Simple_repeat Simple_repeat 1 52 0 441 234 32 0 chr10 121379436 121379530 -24209758 + MIR SINE MIR 57 153 -109 710 308 47 4 chr10 121380451 121380685 -24208603 - MIR SINE MIR 0 262 19 1338 152 16 58 chr10 121380779 121381036 -24208252 - AluJb SINE Alu 0 312 67 263 182 182 0 chr10 121381046 121381101 -24208187 + MIR SINE MIR 79 143 -65 1267 213 53 50 chr10 121381199 121381304 -24207984 + L1ME2 LINE L1 5728 5831 -503 2202 121 0 31 chr10 121381304 121381627 -24207661 + AluSq SINE Alu 1 313 0 1267 213 53 50 chr10 121381627 121381965 -24207323 + L1ME2 LINE L1 5831 6332 -2 491 311 121 26 chr10 121381967 121382215 -24207073 + L1MC4a LINE L1 5435 5658 -2150 665 223 120 50 chr10 121382215 121382457 -24206831 + MIR SINE MIR 2 260 -2 491 311 121 26 chr10 121382457 121382664 -24206624 + L1MC4a LINE L1 5658 5933 -1875 210 250 0 36 chr10 121382924 121382980 -24206308 + L2 LINE L2 3219 3272 0 308 290 43 0 chr10 121383656 121383749 -24205539 - MIR SINE MIR -69 139 43 1924 148 0 30 chr10 121384170 121384475 -24204813 + AluJo SINE Alu 1 296 -16 237 65 0 0 chr10 121384738 121384769 -24204519 + (A)n Simple_repeat Simple_repeat 1 31 0 214 255 0 0 chr10 121387168 121387215 -24202073 + L2 LINE L2 3267 3313 0 584 280 7 0 chr10 121388225 121388368 -24200920 - MIR SINE MIR -54 208 65 634 232 82 53 chr10 121388767 121388974 -24200314 + MER58C DNA MER1_type 1 213 -2 480 313 63 83 chr10 121389747 121389883 -24199405 + L2 LINE L2 2605 2742 -530 2396 92 0 35 chr10 121389883 121390199 -24199089 - AluSq SINE Alu -8 305 1 480 313 63 83 chr10 121390199 121390665 -24198623 + L2 LINE L2 2742 3215 -57 269 261 97 62 chr10 121390884 121391060 -24198228 + MER102b DNA MER1_type 133 314 -27 184 257 193 28 chr10 121391338 121391447 -24197841 - MIR SINE MIR -119 143 17 * 726 276 9 36 chr10 121391433 121391658 -24197630 - L2 LINE L2 -1 3312 3094 214 255 37 37 chr10 121391693 121391854 -24197434 + (GAGTG)n Simple_repeat Simple_repeat 1 161 0 * 267 301 60 0 chr10 121391739 121391905 -24197383 + (GGGTG)n Simple_repeat Simple_repeat 1 176 0 271 263 175 26 chr10 121391919 121392113 -24197175 - L2 LINE L2 -200 3113 2891 1578 216 14 39 chr10 121392889 121393302 -24195986 + LTR37A LTR ERV1 19 421 -5 402 307 114 66 chr10 121393319 121393403 -24195885 + L2 LINE L2 2874 2953 -319 2318 95 0 13 chr10 121393403 121393708 -24195580 + AluSg SINE Alu 1 301 -9 402 307 114 66 chr10 121393708 121394001 -24195287 + L2 LINE L2 2953 3269 -3 2429 105 0 0 chr10 121394338 121394644 -24194644 - AluSq SINE Alu -7 306 1 889 245 39 43 chr10 121394925 121395158 -24194130 + MIR SINE MIR 25 256 -6 190 345 95 26 chr10 121396516 121396632 -24192656 - MIR3 SINE MIR -7 201 78 534 103 0 0 chr10 121397327 121397405 -24191883 + (CA)n Simple_repeat Simple_repeat 1 78 0 224 196 39 0 chr10 121398129 121398180 -24191108 + GA-rich Low_complexity Low_complexity 2 54 0 268 302 35 0 chr10 121398180 121398266 -24191022 - MIR3 SINE MIR -12 196 108 242 270 41 61 chr10 121398351 121398449 -24190839 - MIR SINE MIR -114 94 15 25 31 0 0 chr10 121398679 121398711 -24190577 + AT_rich Low_complexity Low_complexity 1 32 0 261 83 0 83 chr10 121398794 121398854 -24190434 + L1MB7 LINE L1 6130 6184 0 232 282 91 36 chr10 121398953 121398964 -24190324 - MIR3 SINE MIR 0 208 199 1836 177 0 7 chr10 121398964 121399264 -24190024 - AluJo SINE Alu -14 298 1 232 282 91 36 chr10 121399264 121399362 -24189926 - MIR3 SINE MIR -9 199 93 196 186 23 0 chr10 121400983 121401026 -24188262 + L2 LINE L2 3208 3251 -21 470 202 27 71 chr10 121401447 121401549 -24187739 - L1MC5 LINE L1 -50 7911 7819 2425 116 84 27 chr10 121401549 121401912 -24187376 + MSTA LTR MaLR 1 391 -37 2196 98 17 3 chr10 121401912 121402207 -24187081 - AluSx SINE Alu -13 299 1 2425 116 84 27 chr10 121402207 121402248 -24187040 + MSTA LTR MaLR 391 428 0 470 202 27 71 chr10 121402248 121402328 -24186960 - L1MC5 LINE L1 -142 7819 7737 800 256 87 99 chr10 121403849 121404365 -24184923 + MLT1K LTR MaLR 18 527 -61 491 227 175 7 chr10 121404627 121404781 -24184507 + MER5A DNA MER1_type 10 189 0 186 365 27 0 chr10 121404781 121404845 -24184443 + MIR SINE MIR 52 117 -91 557 261 64 6 chr10 121404912 121405069 -24184219 + MIR SINE MIR 41 206 -56 311 221 13 13 chr10 121405246 121405323 -24183965 - MIR SINE MIR -123 139 63 270 287 10 0 chr10 121406081 121406182 -24183106 + L1MDa LINE L1 2474 2575 -3965 * 285 201 55 73 chr10 121406177 121406341 -24182947 + L1ME3A LINE L1 5272 5432 -2610 1739 141 10 48 chr10 121406352 121406663 -24182625 + AluSc SINE Alu 1 300 0 1174 224 88 115 chr10 121406849 121406892 -24182396 + L1ME3A LINE L1 5482 5525 -645 2373 87 7 0 chr10 121406892 121407190 -24182098 - AluSq SINE Alu -13 300 1 1174 224 88 115 chr10 121407190 121407854 -24181434 + L1ME3A LINE L1 5525 6161 -9 254 308 0 0 chr10 121408334 121408399 -24180889 + L2 LINE L2 3249 3313 0 866 205 19 61 chr10 121408617 121408880 -24180408 + L1ME3 LINE L1 5909 6160 -2 877 175 7 7 chr10 121411039 121411182 -24178106 - AluJb SINE Alu -25 287 145 700 306 37 30 chr10 121411200 121411573 -24177715 + L1MC4a LINE L1 5474 5813 -308 1388 172 0 47 chr10 121411573 121411829 -24177459 - AluJo SINE Alu -22 290 47 286 253 62 7 chr10 121411906 121412052 -24177236 + L1MC4 LINE L1 7889 8042 0 203 259 0 35 chr10 121414211 121414269 -24175019 + GA-rich Low_complexity Low_complexity 3 58 0 960 181 163 88 chr10 121414508 121414883 -24174405 + MER57A LTR ERV1 1 403 0 455 325 25 6 chr10 121415089 121415252 -24174036 + MIR3 SINE MIR 16 181 -27 371 333 66 11 chr10 121415734 121415917 -24173371 + MIR SINE MIR 36 228 -34 641 236 27 72 chr10 121416006 121416136 -24173152 + L1MC4 LINE L1 7786 7900 -142 519 45 0 0 chr10 121416136 121416202 -24173086 + (TAGA)n Simple_repeat Simple_repeat 3 68 0 641 236 27 72 chr10 121416202 121416334 -24172954 + L1MC4 LINE L1 7900 8036 -6 304 293 157 14 chr10 121417374 121417521 -24171767 - MIR3 SINE MIR -1 207 40 1304 133 44 44 chr10 121418674 121418861 -24170427 + AluJb SINE Alu 87 276 -36 180 0 0 0 chr10 121418861 121418881 -24170407 + (TAAA)n Simple_repeat Simple_repeat 4 23 0 1304 133 44 44 chr10 121418881 121418919 -24170369 + AluJb SINE Alu 275 312 0 951 259 45 0 chr10 121420197 121420440 -24168848 + MIR SINE MIR 9 262 0 354 273 27 0 chr10 121421187 121421305 -24167983 - MIR SINE MIR -76 132 28 1071 123 0 7 chr10 121422761 121422916 -24166372 - AluSc SINE Alu -10 299 146 268 219 78 0 chr10 121422920 121422984 -24166304 - MLT1K LTR MaLR -377 211 143 311 119 0 0 chr10 121423217 121423259 -24166029 + Alu SINE Alu 1 42 -259 610 187 115 29 chr10 121423260 121423399 -24165889 + AluJo/FRAM SINE Alu 155 305 -7 3073 154 26 20 chr10 121424020 121424566 -24164722 + L1MB5 LINE L1 5584 6132 -42 614 246 27 32 chr10 121424685 121424872 -24164416 + L2 LINE L2 3118 3303 -10 525 233 16 104 chr10 121425591 121425784 -24163504 + MIR SINE MIR 2 177 -85 419 292 24 38 chr10 121427931 121428140 -24161148 + L1ME4a LINE L1 5610 5815 -306 319 233 0 0 chr10 121428354 121428427 -24160861 + L1ME4a LINE L1 5838 5910 -211 3662 189 113 14 chr10 121428521 121429299 -24159989 - MER21B LTR ERV1 -8 855 1 250 368 76 0 chr10 121431098 121431242 -24158046 + L2 LINE L2 3100 3254 -18 2505 157 60 42 chr10 121431532 121432028 -24157260 + MLT1D LTR MaLR 1 505 0 650 263 225 16 chr10 121432210 121432526 -24156762 + MLT1K LTR MaLR 152 533 -55 199 241 74 0 chr10 121433580 121433634 -24155654 - MIR3 SINE MIR -24 184 127 187 104 42 0 chr10 121433634 121433682 -24155606 + A-rich Low_complexity Low_complexity 1 50 0 263 364 12 33 chr10 121434126 121434318 -24154970 - MIR SINE MIR -65 143 14 518 278 46 35 chr10 121435256 121435429 -24153859 + MIR3 SINE MIR 33 207 -1 199 233 0 0 chr10 121435419 121435462 -24153826 + MIR SINE MIR 111 153 -109 * 1852 154 97 6 chr10 121435618 121435937 -24153351 - MER7A DNA MER2_type 0 346 1 257 282 40 24 chr10 121436538 121436662 -24152626 + L2 LINE L2 2932 3057 -215 1798 105 108 25 chr10 121436907 121437193 -24152095 + AluSx SINE Alu 1 310 -2 332 341 23 0 chr10 121437828 121437960 -24151328 + MIR3 SINE MIR 64 198 -10 455 155 144 134 chr10 121438079 121438266 -24151022 - MER5A DNA MER1_type 0 189 1 1678 190 0 3 chr10 121438317 121438612 -24150676 + AluJo SINE Alu 1 294 -18 510 227 117 37 chr10 121439107 121439270 -24150018 - MER5B DNA MER1_type 0 178 3 5226 70 90 48 chr10 121440064 121440896 -24148392 + SVA Other Other 2 868 -518 1445 206 27 10 chr10 121441349 121441645 -24147643 - AluJo SINE Alu -11 301 1 22 0 0 0 chr10 121443190 121443212 -24146076 + AT_rich Low_complexity Low_complexity 1 22 0 936 144 50 0 chr10 121443212 121443393 -24145895 - L1MA9 LINE L1 0 6312 6123 2191 123 7 0 chr10 121443843 121444171 -24145117 - AluSx SINE Alu 0 331 2 252 348 49 16 chr10 121444305 121444489 -24144799 - MIR SINE MIR -15 247 58 463 272 110 5 chr10 121444902 121445093 -24144195 + MIR SINE MIR 2 212 -50 3163 87 7 0 chr10 121445815 121446239 -24143049 + L1P LINE L1 4088 4514 -1632 * 18376 49 0 3 chr10 121446236 121448530 -24140758 - L1P LINE L1 -1149 4997 2710 379 298 138 6 chr10 121448864 121449045 -24140243 + MIR SINE MIR 33 237 -25 962 192 0 6 chr10 121449433 121449600 -24139688 + FRAM SINE Alu 1 166 0 401 123 31 0 chr10 121449612 121449677 -24139611 + Alu SINE Alu 235 301 0 824 279 73 87 chr10 121449727 121450427 -24138861 + L1MC4a LINE L1 5254 5943 -1865 1939 43 4 50 chr10 121450832 121451111 -24138177 + L1PA2 LINE L1 5888 6153 -2 226 320 13 0 chr10 121451281 121451356 -24137932 - MIR SINE MIR -62 146 71 195 343 102 9 chr10 121452425 121452533 -24136755 + L2 LINE L2 3150 3267 -5 214 269 0 19 chr10 121452659 121452711 -24136577 - MIR3 SINE MIR -43 165 115 192 246 0 119 chr10 121452748 121452789 -24136499 - MIR SINE MIR -68 140 96 2399 113 0 0 chr10 121452789 121453099 -24136189 - AluSg SINE Alu 0 310 1 192 246 0 119 chr10 121453099 121453175 -24136113 - MIR SINE MIR -112 96 37 432 261 144 22 chr10 121453712 121453892 -24135396 + MIR SINE MIR 53 254 -8 326 207 41 7 chr10 121454173 121454318 -24134970 + (TG)n Simple_repeat Simple_repeat 1 150 0 218 261 57 23 chr10 121454447 121454535 -24134753 - MIR SINE MIR -107 155 65 180 340 126 57 chr10 121455191 121455453 -24133835 - L2 LINE L2 -1 3271 2992 577 308 45 13 chr10 121455497 121455721 -24133567 - MIR SINE MIR -13 249 19 22 0 0 0 chr10 121455738 121455760 -24133528 + AT_rich Low_complexity Low_complexity 1 22 0 282 250 36 12 chr10 121455964 121456048 -24133240 - L1MC/D LINE L1 -1928 5880 5795 278 314 0 0 chr10 121457150 121457220 -24132068 - MIR SINE MIR -109 99 30 516 277 26 0 chr10 121457297 121457452 -24131836 + MER103 DNA DNA 7 165 -1 2754 136 14 76 chr10 121457822 121458309 -24130979 - LTR32 LTR ERVL 0 471 15 512 316 13 7 chr10 121460251 121460406 -24128882 + MIR3 SINE MIR 44 199 -9 2238 113 0 7 chr10 121461112 121461412 -24127876 - AluSx SINE Alu -14 298 1 238 250 0 115 chr10 121461533 121461629 -24127659 - MIR SINE MIR -58 150 66 303 175 62 136 chr10 121462400 121462495 -24126793 - MER103 DNA DNA -1 165 87 2158 136 0 0 chr10 121462495 121462803 -24126485 + AluSq SINE Alu 1 308 -5 303 175 62 136 chr10 121462803 121462884 -24126404 - MER103 DNA DNA -79 87 2 219 318 98 30 chr10 121462945 121463077 -24126211 - MIR3 SINE MIR -28 180 40 1941 155 0 3 chr10 121463756 121464060 -24125228 + AluJb SINE Alu 1 303 -9 1646 167 9 50 chr10 121464260 121464583 -24124705 + AluJb SINE Alu 3 312 0 213 39 0 0 chr10 121464809 121464835 -24124453 + (TG)n Simple_repeat Simple_repeat 1 26 0 426 289 90 6 chr10 121467997 121468163 -24121125 + MIR SINE MIR 33 212 -50 1382 149 5 14 chr10 121470016 121470238 -24119050 - AluJb SINE Alu -7 305 86 21 57 0 0 chr10 121470697 121470732 -24118556 + AT_rich Low_complexity Low_complexity 1 35 0 303 159 0 0 chr10 121471179 121471223 -24118065 + MER3 DNA MER1_type 47 90 -119 421 167 13 26 chr10 121471223 121471301 -24117987 - FRAM/FAM SINE Alu -99 77 1 794 106 83 7 chr10 121471301 121471518 -24117770 + MER33 DNA MER1_type 30 316 -8 267 317 90 12 chr10 121471706 121471873 -24117415 + MIR SINE MIR 71 250 -12 230 263 211 26 chr10 121472619 121472771 -24116517 + MIR SINE MIR 49 228 -34 217 308 158 61 chr10 121473222 121473314 -24115974 - L2 LINE L2 -452 2862 2780 2115 84 49 3 chr10 121473314 121473600 -24115688 + AluY SINE Alu 1 299 -12 217 308 158 61 chr10 121473600 121473754 -24115534 - L2 LINE L2 -534 2780 2592 405 253 152 13 chr10 121474598 121474756 -24114532 + MIR SINE MIR 77 256 -6 363 213 0 0 chr10 121475005 121475085 -24114203 + MER116 DNA Mariner 1 80 0 322 224 145 0 chr10 121475935 121476011 -24113277 + L2 LINE L2 3221 3307 -6 225 187 96 160 chr10 121477462 121477649 -24111639 - L1MC5 LINE L1 -30 7931 7757 1427 187 15 40 chr10 121477929 121478202 -24111086 + Tigger7 DNA MER2_type 2 267 -2220 495 177 21 10 chr10 121478200 121478296 -24110992 + Tigger7 DNA MER2_type 2489 2585 -2 * 25 31 0 0 chr10 121478722 121478754 -24110534 + AT_rich Low_complexity Low_complexity 1 32 0 1699 163 4 7 chr10 121478754 121479024 -24110264 - AluJo SINE Alu -43 269 1 51 58 0 0 chr10 121479519 121479605 -24109683 + AT_rich Low_complexity Low_complexity 1 86 0 184 367 50 0 chr10 121480049 121480109 -24109179 - L2 LINE L2 -94 3178 3116 233 319 29 0 chr10 121480534 121480603 -24108685 + MIR SINE MIR 21 91 -171 257 264 81 0 chr10 121480639 121480726 -24108562 + MIR SINE MIR 163 256 -6 1488 162 127 7 chr10 121481022 121481330 -24107958 + MER7A DNA MER2_type 2 344 -2 21 36 0 0 chr10 121481559 121481587 -24107701 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr10 121482572 121482596 -24106692 + AT_rich Low_complexity Low_complexity 1 24 0 304 262 160 5 chr10 121482631 121482818 -24106470 - L1ME LINE L1 -266 5855 5640 2164 66 30 0 chr10 121482903 121483174 -24106114 + AluSg SINE Alu 26 304 -6 326 301 0 12 chr10 121483176 121483259 -24106029 - L2 LINE L2 -25 3247 3166 318 268 72 21 chr10 121483786 121483883 -24105405 + MIR3 SINE MIR 97 198 -10 22 35 0 0 chr10 121484758 121484787 -24104501 + AT_rich Low_complexity Low_complexity 1 29 0 2133 100 0 7 chr10 121485074 121485355 -24103933 + AluSx SINE Alu 24 302 -10 180 77 0 0 chr10 121485586 121485612 -24103676 + (TG)n Simple_repeat Simple_repeat 2 27 0 1635 171 53 48 chr10 121485781 121486214 -24103074 + L1M4 LINE L1 4135 4569 -1577 3283 151 39 10 chr10 121486512 121487096 -24102192 + MER7C DNA MER2_type 1 601 -1 4143 147 7 11 chr10 121488992 121489693 -24099595 - L1PA16 LINE L1 -1 6165 5468 424 240 8 50 chr10 121490292 121490413 -24098875 - MIR SINE MIR -128 134 19 30 59 0 0 chr10 121491634 121491685 -24097603 + AT_rich Low_complexity Low_complexity 1 51 0 21 0 0 0 chr10 121491881 121491902 -24097386 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr10 121492087 121492107 -24097181 + (T)n Simple_repeat Simple_repeat 1 20 0 2191 105 10 3 chr10 121493444 121493740 -24095548 + AluSp SINE Alu 1 298 -15 1310 194 39 28 chr10 121494935 121495218 -24094070 + AluJo SINE Alu 5 290 -22 1235 165 45 91 chr10 121497550 121497954 -24091334 - Tigger3(Golem) DNA MER2_type -1 3028 11 455 292 187 27 chr10 121498155 121498412 -24090876 - L2 LINE L2 -3 3310 3013 384 239 151 72 chr10 121498525 121498776 -24090512 + L1MC4a LINE L1 5560 5830 -1978 2315 58 4 0 chr10 121499209 121499487 -24089801 + AluY SINE Alu 1 279 -32 1234 183 143 21 chr10 121499612 121499933 -24089355 - Charlie2 DNA MER1_type -1 2861 2581 2441 53 0 13 chr10 121499933 121500233 -24089055 - AluY SINE Alu -15 296 1 1234 183 143 21 chr10 121500233 121500487 -24088801 - Charlie2 DNA MER1_type -281 2581 2359 2339 93 0 0 chr10 121500487 121500787 -24088501 - AluSx SINE Alu -12 300 1 1234 183 143 21 chr10 121500787 121501005 -24088283 - Charlie2 DNA MER1_type -503 2359 1874 518 291 14 105 chr10 121501030 121501165 -24088123 - Charlie2 DNA MER1_type -2542 320 174 1838 162 16 10 chr10 121501165 121501468 -24087820 + AluJo SINE Alu 6 310 -2 518 291 14 105 chr10 121501468 121501676 -24087612 - Charlie2 DNA MER1_type -2688 174 8 369 215 61 55 chr10 121501737 121501900 -24087388 + MER103 DNA DNA 3 166 0 2203 92 7 7 chr10 121503132 121503426 -24085862 - AluSx SINE Alu -18 294 1 304 328 85 87 chr10 121503816 121504522 -24084766 - L2 LINE L2 0 3272 2565 329 298 99 0 chr10 121504940 121505091 -24084197 + MIR SINE MIR 97 262 0 190 277 109 80 chr10 121505599 121505736 -24083552 - MIR3 SINE MIR -66 142 1 228 67 0 0 chr10 121506075 121506105 -24083183 + (TTTTC)n Simple_repeat Simple_repeat 2 31 0 309 305 106 7 chr10 121507076 121507227 -24082061 + MIR SINE MIR 51 216 -46 781 265 96 36 chr10 121507756 121508058 -24081230 + MER102a DNA MER1_type 6 325 -5 274 306 9 63 chr10 121508972 121509083 -24080205 + MER5A DNA MER1_type 2 106 -83 1858 171 10 0 chr10 121509086 121509384 -24079904 - AluJb SINE Alu -9 303 3 1943 156 10 0 chr10 121509637 121509932 -24079356 - AluSx SINE Alu -13 299 2 227 311 107 29 chr10 121509958 121510061 -24079227 - MIR SINE MIR -150 112 2 242 244 85 0 chr10 121511029 121511111 -24078177 + L1MC4 LINE L1 7544 7632 -410 216 0 0 0 chr10 121511127 121511151 -24078137 + (T)n Simple_repeat Simple_repeat 1 24 0 237 255 38 19 chr10 121511372 121511478 -24077810 + L1MC5 LINE L1 7810 7917 -44 268 192 26 26 chr10 121513421 121513499 -24075789 + (CGGGG)n Simple_repeat Simple_repeat 1 78 0 325 304 170 36 chr10 121513680 121514091 -24075197 - L1M2 LINE L1 -5858 991 526 230 122 0 41 chr10 121514573 121514622 -24074666 + (TTTTC)n Simple_repeat Simple_repeat 3 49 0 1493 104 93 11 chr10 121515609 121515879 -24073409 - L1MA3 LINE L1 0 6305 6014 21 82 0 0 chr10 121515935 121515984 -24073304 + AT_rich Low_complexity Low_complexity 1 49 0 25 0 0 0 chr10 121517239 121517264 -24072024 + AT_rich Low_complexity Low_complexity 1 25 0 30 27 0 0 chr10 121517415 121517452 -24071836 + AT_rich Low_complexity Low_complexity 1 37 0 251 383 97 7 chr10 121518209 121518363 -24070925 - L2 LINE L2 -1 3271 3104 23 0 0 0 chr10 121518611 121518634 -24070654 + AT_rich Low_complexity Low_complexity 1 23 0 2301 98 0 3 chr10 121518852 121519157 -24070131 + AluSx SINE Alu 1 304 -8 1836 165 3 16 chr10 121519505 121519821 -24069467 - AluJb SINE Alu 0 312 1 24 0 0 0 chr10 121519982 121520006 -24069282 + AT_rich Low_complexity Low_complexity 1 24 0 329 337 73 66 chr10 121520108 121520396 -24068892 + L2 LINE L2 2979 3268 -4 1926 127 0 0 chr10 121522099 121522366 -24066922 + AluSx SINE Alu 1 267 -45 1725 168 3 0 chr10 121522681 121522966 -24066322 + AluJb SINE Alu 4 289 -23 1551 199 55 28 chr10 121523545 121523907 -24065381 - MLT1A2 LTR MaLR -2 372 1 629 320 89 52 chr10 121525874 121526676 -24062612 - L2 LINE L2 -5 3267 2441 360 292 131 72 chr10 121526703 121526939 -24062349 + L2 LINE L2 3018 3267 -5 25 0 0 0 chr10 121526946 121526971 -24062317 + AT_rich Low_complexity Low_complexity 1 25 0 250 239 166 37 chr10 121527282 121527445 -24061843 - L1ME4a LINE L1 -1 6120 5937 428 234 78 105 chr10 121527570 121527717 -24061571 - MER102b DNA MER1_type -1097 331 192 974 158 6 28 chr10 121527717 121527894 -24061394 + FAM SINE Alu 1 173 -2 428 234 78 105 chr10 121527894 121528003 -24061285 - MER102b DNA MER1_type -1236 192 82 485 214 86 120 chr10 121528167 121528434 -24060854 + L1ME LINE L1 5534 5791 -330 318 219 194 13 chr10 121528560 121528715 -24060573 - L1ME4a LINE L1 -299 5822 5640 519 192 178 57 chr10 121529089 121529191 -24060097 - L1MC4a LINE L1 -1829 6477 6389 553 259 86 16 chr10 121529191 121529434 -24059854 - MIR SINE MIR 0 262 3 519 192 178 57 chr10 121529434 121529612 -24059676 - L1MC4a LINE L1 -1917 6389 6163 439 252 222 4 chr10 121529848 121530114 -24059174 - HAL1b LINE L1 -477 871 548 2274 72 3 23 chr10 121530160 121530467 -24058821 - AluSq SINE Alu -12 301 1 482 256 13 13 chr10 121531137 121531293 -24057995 - FRAM SINE Alu -7 159 4 807 188 51 110 chr10 121531344 121531564 -24057724 - L1MC4a LINE L1 -743 5901 5670 1850 113 39 0 chr10 121531564 121531821 -24057467 - AluSx SINE Alu -44 268 2 807 188 51 110 chr10 121531821 121532222 -24057066 - L1MC4a LINE L1 -974 5670 5414 1354 224 43 6 chr10 121532222 121532544 -24056744 - Charlie1 DNA MER1_type -526 2235 1902 939 202 0 0 chr10 121532544 121532712 -24056576 - FRAM SINE Alu -8 168 1 423 167 39 0 chr10 121532712 121532790 -24056498 - Charlie1 DNA MER1_type -857 1904 1824 2609 212 64 61 chr10 121532887 121533736 -24055552 - L1MC4a LINE L1 -4606 2040 1190 4055 206 57 84 chr10 121534595 121535819 -24053469 - L1MC4a LINE L1 -5351 1191 1 910 271 141 33 chr10 121536531 121537091 -24052197 - L2 LINE L2 -1 3312 2695 1659 249 16 31 chr10 121537096 121537732 -24051556 + L1M4c LINE L1 1 1988 -5042 8895 216 60 22 chr10 121537761 121539029 -24050259 + L1M4c LINE L1 2754 3973 -3133 1197 123 64 41 chr10 121539029 121539249 -24050039 - MER30 DNA MER1_type -1 229 5 8895 216 60 22 chr10 121539249 121540658 -24048630 + L1M4c LINE L1 3973 5537 -1569 203 337 45 22 chr10 121541246 121541335 -24047953 - MIR SINE MIR -85 123 33 1511 63 4 122 chr10 121542124 121542379 -24046909 + AluSq SINE Alu 70 294 -19 925 282 95 79 chr10 121543120 121544040 -24045248 + L2 LINE L2 2360 3281 -32 201 326 0 54 chr10 121544177 121544269 -24045019 - MIR3 SINE MIR -119 89 3 33 56 0 0 chr10 121544358 121544412 -24044876 + AT_rich Low_complexity Low_complexity 1 54 0 37 23 0 0 chr10 121544645 121544689 -24044599 + AT_rich Low_complexity Low_complexity 1 44 0 207 204 0 0 chr10 121544824 121544868 -24044420 + (TA)n Simple_repeat Simple_repeat 2 45 0 3451 175 35 23 chr10 121544905 121545254 -24044034 + L1MC1 LINE L1 5616 5959 -374 5395 94 5 8 chr10 121545254 121546025 -24043263 + L1PA8 LINE L1 5388 6172 0 3451 175 35 23 chr10 121546025 121546384 -24042904 + L1MC1 LINE L1 5959 6333 0 1476 140 44 9 chr10 121546614 121546843 -24042445 + AluSq SINE Alu 1 237 -76 2442 178 64 50 chr10 121546849 121547915 -24041373 - L1MA9 LINE L1 -468 5844 4776 2301 102 3 0 chr10 121548333 121548636 -24040652 - AluSc SINE Alu -5 304 1 247 276 0 58 chr10 121548724 121548811 -24040477 + L2 LINE L2 2222 2303 -1011 326 209 283 6 chr10 121549023 121549200 -24040088 - MER20B DNA MER1_type 0 783 558 518 253 66 7 chr10 121549207 121549639 -24039649 - MER20B DNA MER1_type -159 624 39 374 256 71 65 chr10 121549692 121549860 -24039428 - MER5B DNA MER1_type 0 178 10 952 223 47 5 chr10 121550260 121550475 -24038813 + MER58A DNA MER1_type 1 224 0 283 236 181 43 chr10 121550558 121550700 -24038588 + MIR SINE MIR 25 165 -43 2163 103 10 3 chr10 121550800 121551101 -24038187 - AluSx SINE Alu -9 303 1 31 26 0 0 chr10 121551973 121552011 -24037277 + AT_rich Low_complexity Low_complexity 1 38 0 334 232 84 42 chr10 121552089 121552184 -24037104 - MER5A DNA MER1_type -49 140 42 233 281 22 34 chr10 121553498 121553513 -24035775 + MER5A DNA MER1_type 1 14 -175 272 308 26 13 chr10 121553513 121553591 -24035697 - MER5A DNA MER1_type -2 187 109 728 250 73 40 chr10 121553731 121553979 -24035309 + MIR SINE MIR 7 262 0 485 308 58 38 chr10 121557228 121557437 -24031851 - MIR SINE MIR -34 228 17 258 257 105 19 chr10 121557449 121557554 -24031734 - MER5B DNA MER1_type -64 114 1 3979 172 18 4 chr10 121557579 121558339 -24030949 - L1MB8 LINE L1 -3 6175 5405 37 0 0 0 chr10 121558650 121558687 -24030601 + AT_rich Low_complexity Low_complexity 1 37 0 831 170 25 13 chr10 121558777 121558936 -24030352 + FRAM SINE Alu 1 158 -18 5467 138 45 40 chr10 121560027 121561890 -24027398 - L1MA5 LINE L1 -13 6287 4421 27 87 0 0 chr10 121562224 121562293 -24026995 + AT_rich Low_complexity Low_complexity 1 69 0 924 135 57 0 chr10 121562716 121562857 -24026431 + AluJb SINE Alu 33 181 -131 2202 239 90 21 chr10 121563143 121563606 -24025682 - L1MCa LINE L1 -2366 4060 3630 200 33 0 33 chr10 121563606 121563636 -24025652 + (TA)n Simple_repeat Simple_repeat 1 29 0 2202 239 90 21 chr10 121563636 121564185 -24025103 - L1MCa LINE L1 -2796 3630 2897 314 187 80 0 chr10 121564222 121564297 -24024991 - L1MCa LINE L1 -4018 2589 2509 721 239 31 57 chr10 121564302 121564654 -24024634 - L1MCa LINE L1 -4213 2394 2052 1994 239 33 60 chr10 121564663 121564899 -24024389 - L1MC4a LINE L1 0 7808 7567 2225 60 46 0 chr10 121564899 121565182 -24024106 - AluY SINE Alu -15 296 1 1994 239 33 60 chr10 121565182 121565641 -24023647 - L1MC4a LINE L1 -241 7567 7132 2200 121 3 0 chr10 121565645 121565950 -24023338 - AluSq SINE Alu -7 306 1 554 259 28 50 chr10 121565955 121566057 -24023231 - L1MCa LINE L1 -4653 1954 1851 1795 173 3 3 chr10 121566057 121566352 -24022936 - AluJb SINE Alu -17 295 1 554 259 28 50 chr10 121566352 121566500 -24022788 - L1MCa LINE L1 -4756 1851 1520 * 2042 274 87 40 chr10 121566480 121567000 -24022288 - L1MCa LINE L1 -5004 1603 1109 2114 89 25 3 chr10 121567000 121567282 -24022006 - AluSp SINE Alu -21 292 5 2042 274 87 40 chr10 121567282 121568020 -24021268 - L1MCa LINE L1 -5498 1109 286 417 273 78 102 chr10 121568297 121568687 -24020601 - L1ME LINE L1 -5540 876 497 1821 235 83 34 chr10 121568687 121569252 -24020036 - MLT1E LTR MaLR 0 593 1 417 273 78 102 chr10 121569252 121569333 -24019955 - L1ME LINE L1 -5919 497 416 492 211 16 49 chr10 121569643 121569766 -24019522 + MER5C DNA MER1_type 6 124 -200 254 330 45 0 chr10 121569792 121569880 -24019408 + MER5C DNA MER1_type 233 324 0 2202 46 8 0 chr10 121569900 121570163 -24019125 - AluY SINE Alu -12 299 35 275 354 73 43 chr10 121570207 121570509 -24018779 + L2 LINE L2 2556 2866 -448 284 245 37 149 chr10 121570543 121570812 -24018476 + L2 LINE L2 3075 3313 0 287 272 59 44 chr10 121570960 121571096 -24018192 + L2 LINE L2 3176 3313 0 539 260 132 5 chr10 121571109 121571313 -24017975 - L1ME LINE L1 -6177 249 20 * 1005 225 36 22 chr10 121571307 121571583 -24017705 - L1M4 LINE L1 -2114 4032 3753 282 29 0 0 chr10 121571585 121571620 -24017668 + (TTTA)n Simple_repeat Simple_repeat 1 35 0 7390 16 0 0 chr10 121571620 121572467 -24016821 - L1PA3 LINE L1 -24 6131 5285 2179 237 55 37 chr10 121572462 121573243 -24016045 - L1M4 LINE L1 -2389 3757 2963 * 4705 166 36 17 chr10 121573240 121574275 -24015013 - L1MB4 LINE L1 0 6180 5121 21 0 0 0 chr10 121575216 121575237 -24014051 + AT_rich Low_complexity Low_complexity 1 21 0 2067 115 0 13 chr10 121576212 121576516 -24012772 - AluSx SINE Alu -10 302 3 24 0 0 0 chr10 121576990 121577014 -24012274 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr10 121577765 121577787 -24011501 + AT_rich Low_complexity Low_complexity 1 22 0 2745 220 133 11 chr10 121577939 121578671 -24010617 - L1MB4 LINE L1 -2467 3679 2809 540 115 0 0 chr10 121578671 121578749 -24010539 + MADE1 DNA Mariner 1 78 -2 2745 220 133 11 chr10 121578749 121578938 -24010350 - L1MB4 LINE L1 -3337 2809 2645 567 273 109 63 chr10 121579085 121579496 -24009792 - HAL1b LINE L1 -642 706 277 2246 130 155 37 chr10 121579870 121580405 -24008883 + pTR5 LTR ERV1 1285 2025 -413 375 179 0 36 chr10 121580405 121580489 -24008799 + LTR30 LTR ERV1 544 624 -98 182 61 0 30 chr10 121580493 121580526 -24008762 + (CAAAAA)n Simple_repeat Simple_repeat 2 33 0 403 353 14 36 chr10 121580656 121580795 -24008493 + L2 LINE L2 2879 3014 -299 30 0 0 0 chr10 121580851 121580881 -24008407 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr10 121582261 121582289 -24006999 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr10 121582980 121583003 -24006285 + AT_rich Low_complexity Low_complexity 1 23 0 281 313 121 0 chr10 121583023 121583189 -24006099 + L1MC/D LINE L1 5656 5841 -1967 189 350 88 7 chr10 121583741 121583878 -24005410 - L2 LINE L2 -6 3307 3160 213 250 0 0 chr10 121584655 121584695 -24004593 + L2 LINE L2 3147 3186 -86 1841 144 7 10 chr10 121584843 121585141 -24004147 + AluJb SINE Alu 1 297 -15 21 0 0 0 chr10 121585884 121585905 -24003383 + AT_rich Low_complexity Low_complexity 1 21 0 263 271 139 53 chr10 121585952 121586233 -24003055 - L1ME4a LINE L1 -40 6081 5777 547 294 53 24 chr10 121586244 121586414 -24002874 - MIR SINE MIR -13 249 75 2041 123 3 10 chr10 121586595 121586895 -24002393 - AluSx SINE Alu -14 298 1 2388 100 3 0 chr10 121588052 121588363 -24000925 + AluSx SINE Alu 1 312 0 2099 94 17 7 chr10 121589754 121590051 -23999237 - AluSq SINE Alu -13 300 1 1968 119 3 38 chr10 121590348 121590667 -23998621 + AluSq SINE Alu 1 308 -5 312 161 0 18 chr10 121590749 121590805 -23998483 + MER5A DNA MER1_type 47 101 -88 332 264 57 9 chr10 121591130 121591236 -23998052 - MIR SINE MIR -47 215 105 355 287 150 0 chr10 121592065 121592232 -23997056 - MIR SINE MIR -18 244 53 529 224 191 7 chr10 121592249 121592401 -23996887 - MER5A DNA MER1_type 0 189 10 205 266 62 16 chr10 121592781 121592845 -23996443 - MIR SINE MIR -172 90 24 264 330 83 9 chr10 121592850 121592959 -23996329 + Charlie8 DNA MER1_type 2 118 -2299 1363 169 61 15 chr10 121593606 121593867 -23995421 + AluJo SINE Alu 7 279 -33 2673 20 0 0 chr10 121594961 121595266 -23994022 - AluYa5 SINE Alu -6 305 1 22 0 0 0 chr10 121596948 121596970 -23992318 + AT_rich Low_complexity Low_complexity 1 22 0 719 277 113 5 chr10 121596976 121597189 -23992099 + MIR SINE MIR 1 236 -26 1984 48 4 0 chr10 121599039 121599287 -23990001 + L1PA5 LINE L1 5902 6150 -4 632 305 23 0 chr10 121599288 121599462 -23989826 + MIR SINE MIR 29 206 -56 251 348 43 35 chr10 121599799 121599940 -23989348 + MER5B DNA MER1_type 2 143 -35 402 245 0 20 chr10 121599963 121600061 -23989227 - MER5B DNA MER1_type -79 99 4 27 29 0 0 chr10 121600169 121600203 -23989085 + AT_rich Low_complexity Low_complexity 1 34 0 2247 115 0 0 chr10 121603140 121603445 -23985843 - AluY SINE Alu -6 305 1 297 266 75 11 chr10 121603549 121603643 -23985645 + MER94 DNA DNA 34 133 -1 320 194 67 97 chr10 121604325 121604459 -23984829 + MER91B DNA MER1_type 1 130 -60 207 269 75 43 chr10 121604473 121604566 -23984722 + MER91B DNA MER1_type 87 182 -8 2306 92 0 19 chr10 121604786 121605102 -23984186 - AluY SINE Alu -1 310 1 21 0 0 0 chr10 121605319 121605340 -23983948 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr10 121605971 121605994 -23983294 + AT_rich Low_complexity Low_complexity 1 23 0 585 311 169 19 chr10 121606462 121606982 -23982306 - L2 LINE L2 -609 2705 2108 25 31 0 0 chr10 121607482 121607514 -23981774 + AT_rich Low_complexity Low_complexity 1 32 0 271 59 0 0 chr10 121607642 121607676 -23981612 - tRNA-Cys-TGC tRNA tRNA -40 35 2 21 0 0 0 chr10 121607728 121607749 -23981539 + AT_rich Low_complexity Low_complexity 1 21 0 1608 167 72 10 chr10 121610328 121610511 -23978777 - AluJo SINE Alu -1 311 102 372 94 0 0 chr10 121610511 121610564 -23978724 + (TTA)n Simple_repeat Simple_repeat 2 54 0 1608 167 72 10 chr10 121610564 121610673 -23978615 - AluJo SINE Alu -210 102 1 401 302 128 23 chr10 121610717 121610889 -23978399 - L2 LINE L2 -6 3307 3118 1641 146 66 3 chr10 121610895 121611183 -23978105 + L1MC1 LINE L1 20 325 -6101 374 114 152 0 chr10 121611197 121611276 -23978012 + L1MA9 LINE L1 6179 6269 -43 4411 155 75 55 chr10 121611312 121612305 -23976983 + L1MC1 LINE L1 333 1345 -5081 5475 211 50 7 chr10 121612308 121614211 -23975077 + L1MC1 LINE L1 4098 6087 -537 2295 168 61 2 chr10 121614343 121614832 -23974456 + L1MC1 LINE L1 6096 6613 0 449 270 223 28 chr10 121614833 121615106 -23974182 - L2 LINE L2 -231 3082 2756 265 170 21 0 chr10 121615115 121615162 -23974126 + MIR SINE MIR 64 111 -97 12775 174 51 34 chr10 121615162 121618100 -23971188 - L1 LINE L1 -753 6812 3823 3368 139 28 85 chr10 121618102 121618927 -23970361 - LTR1 LTR ERV1 -7 778 1 1088 158 48 55 chr10 121618939 121619376 -23969912 - L1 LINE L1 -3757 3808 3365 25 51 0 0 chr10 121620013 121620052 -23969236 + AT_rich Low_complexity Low_complexity 1 39 0 1344 236 42 32 chr10 121620068 121620334 -23968954 - L1ME3A LINE L1 -310 5860 5598 2686 82 3 3 chr10 121620334 121620687 -23968601 - THE1A LTR MaLR 0 355 3 11760 88 11 4 chr10 121620689 121622257 -23967031 - THE1A-int LTR MaLR 0 1580 1 2406 94 17 36 chr10 121622257 121622373 -23966915 - THE1A LTR MaLR 0 355 238 2428 66 0 7 chr10 121622373 121622676 -23966612 + AluY SINE Alu 1 301 -10 2406 94 17 36 chr10 121622676 121622921 -23966367 - THE1A LTR MaLR -117 238 1 1344 236 42 32 chr10 121622921 121623053 -23966235 - L1ME3A LINE L1 -571 5599 5454 395 258 62 0 chr10 121624125 121624253 -23965035 + HAL1b LINE L1 488 623 -725 3437 167 51 14 chr10 121624419 121625144 -23964144 + L1MB8 LINE L1 5425 6176 -2 314 246 156 8 chr10 121625422 121625544 -23963744 - MER106A DNA MER1_type -96 140 1 511 192 0 23 chr10 121625644 121625774 -23963514 + (CATATA)n Simple_repeat Simple_repeat 5 131 0 434 292 97 10 chr10 121625995 121626317 -23962971 + L1MC4 LINE L1 4700 5057 -1089 1298 241 81 52 chr10 121626424 121627006 -23962282 + L1MC4 LINE L1 5383 5981 -1827 3389 226 49 62 chr10 121627058 121628693 -23960595 + L1M3a LINE L1 210 1864 -4170 2254 83 59 0 chr10 121628693 121628981 -23960307 + AluY SINE Alu 1 305 -6 3389 226 49 62 chr10 121628981 121629229 -23960059 + L1M3a LINE L1 1864 2114 -3920 2282 135 42 33 chr10 121629229 121629658 -23959630 - Tigger2a DNA MER2_type -1 433 1 3389 226 49 62 chr10 121629658 121630982 -23958306 + L1M3a LINE L1 2114 2852 -3182 1759 188 34 0 chr10 121630982 121631275 -23958013 + AluSx SINE Alu 1 303 -9 3389 226 49 62 chr10 121631275 121631646 -23957642 + L1M3a LINE L1 2852 3226 -2808 42167 39 4 1 chr10 121631647 121637788 -23951500 + L1PA4 LINE L1 1 6154 -1 875 187 28 24 chr10 121637802 121638036 -23951252 + L1M3a LINE L1 3212 3449 -2585 3550 106 10 0 chr10 121638036 121638545 -23950743 + MER75 DNA T2_type 1 514 0 875 187 28 24 chr10 121638545 121638561 -23950727 + L1M3a LINE L1 3449 3463 -2571 1231 98 0 0 chr10 121638562 121638715 -23950573 + AluSg SINE Alu 1 153 -157 343 179 0 0 chr10 121638715 121638782 -23950506 + L1MA9 LINE L1 6245 6311 -1 613 261 38 5 chr10 121638936 121639147 -23950141 - L1MB5 LINE L1 -9 6165 5948 29 0 0 0 chr10 121640288 121640317 -23948971 + AT_rich Low_complexity Low_complexity 1 29 0 253 271 83 0 chr10 121640891 121640987 -23948301 - MIR3 SINE MIR -20 188 85 1582 187 3 7 chr10 121641045 121641329 -23947959 - AluJo SINE Alu -5 307 25 894 292 23 6 chr10 121642684 121643026 -23946262 + L1MC4 LINE L1 6423 6770 -1272 * 1588 197 6 6 chr10 121643019 121643349 -23945939 + L1M3a LINE L1 3512 3841 -2193 * 2448 246 103 46 chr10 121643348 121644405 -23944883 + L1MC4 LINE L1 6759 7895 -147 285 29 0 0 chr10 121644405 121644439 -23944849 + (TG)n Simple_repeat Simple_repeat 1 34 0 2448 246 103 46 chr10 121644439 121644596 -23944692 + L1MC4 LINE L1 7895 8042 0 1175 255 73 6 chr10 121645033 121645538 -23943750 - L1MDa LINE L1 -2892 3188 2650 3705 183 53 50 chr10 121645545 121646248 -23943040 - L1MB7 LINE L1 -16 6168 5469 724 208 0 0 chr10 121646248 121646368 -23942920 - FLAM_A SINE Alu -12 121 2 3705 183 53 50 chr10 121646368 121647325 -23941963 - L1MB7 LINE L1 -715 5469 4501 1075 246 56 44 chr10 121647328 121647566 -23941722 - L1MDa LINE L1 -3425 2655 2421 1636 213 14 3 chr10 121647566 121647862 -23941426 - AluJb SINE Alu -9 303 5 1075 246 56 44 chr10 121647862 121648014 -23941274 - L1MDa LINE L1 -3659 2421 2272 2203 121 0 22 chr10 121648014 121648329 -23940959 - AluSc SINE Alu -1 308 1 1075 246 56 44 chr10 121648329 121648744 -23940544 - L1MDa LINE L1 -3808 2272 1851 1691 162 36 91 chr10 121648747 121648975 -23940313 + L1MA9 LINE L1 5569 5808 -504 7481 118 9 72 chr10 121648975 121650363 -23938925 + HSMAR2 DNA Mariner 1 1301 -1 339 25 0 0 chr10 121650364 121650404 -23938884 + (TG)n Simple_repeat Simple_repeat 1 40 0 1691 162 36 91 chr10 121650404 121650538 -23938750 + L1MA9 LINE L1 5808 5948 -364 1751 176 7 7 chr10 121650538 121650833 -23938455 - AluSx SINE Alu -17 295 1 1691 162 36 91 chr10 121650833 121650863 -23938425 + L1MA9 LINE L1 5948 5941 -371 1756 189 10 3 chr10 121650863 121651165 -23938123 + AluJo SINE Alu 2 305 -7 1691 162 36 91 chr10 121651165 121651207 -23938081 + L1MA9 LINE L1 5940 5983 -329 4351 226 80 10 chr10 121651207 121652266 -23937022 + L1MA5A LINE L1 7 1139 -5650 3976 174 35 40 chr10 121652320 121653444 -23935844 - L1M2 LINE L1 -4712 2077 1009 12453 179 50 35 chr10 121653528 121654113 -23935175 + L1MA5A LINE L1 2242 2817 -4122 2076 127 0 3 chr10 121654113 121654422 -23934866 + AluSx SINE Alu 1 308 0 12453 179 50 35 chr10 121654422 121655924 -23933364 + L1MA5A LINE L1 2817 4295 -2644 1960 149 3 0 chr10 121655924 121656237 -23933051 + AluSx SINE Alu 1 314 0 12453 179 50 35 chr10 121656237 121658461 -23930827 + L1MA5A LINE L1 4295 6589 -350 2123 119 14 0 chr10 121658461 121658755 -23930533 + AluSg SINE Alu 1 298 -12 12453 179 50 35 chr10 121658755 121659110 -23930178 + L1MA5A LINE L1 6589 6937 -2 1892 123 45 3 chr10 121659120 121659453 -23929835 + L1MA9 LINE L1 5966 6312 0 392 295 151 0 chr10 121659454 121659620 -23929668 - L1MDa LINE L1 -4261 1819 1629 1321 168 141 15 chr10 121659642 121659975 -23929313 + MLT1B LTR MaLR 8 382 -8 529 280 73 39 chr10 121660079 121660145 -23929143 - L1MDa LINE L1 -5114 969 907 1668 199 63 44 chr10 121660145 121660603 -23928685 + MLT1C LTR MaLR 1 467 0 529 280 73 39 chr10 121660603 121660947 -23928341 - L1MDa LINE L1 -5176 907 545 301 356 79 37 chr10 121661047 121661263 -23928025 - L1MDa LINE L1 -5639 431 207 575 162 111 8 chr10 121661932 121662049 -23927239 + FLAM_A SINE Alu 1 129 -4 28 0 0 0 chr10 121662482 121662510 -23926778 + AT_rich Low_complexity Low_complexity 1 28 0 1697 117 0 0 chr10 121662818 121663049 -23926239 - AluSg/x SINE Alu 0 312 82 610 299 81 9 chr10 121663049 121663263 -23926025 - MIR SINE MIR -17 245 13 294 148 0 0 chr10 121663404 121663458 -23925830 + (TG)n Simple_repeat Simple_repeat 1 54 0 180 77 0 0 chr10 121664968 121664994 -23924294 + (TTCA)n Simple_repeat Simple_repeat 4 29 0 394 293 0 9 chr10 121665047 121665153 -23924135 + MER5A DNA MER1_type 43 147 -42 483 263 113 16 chr10 121665644 121665838 -23923450 + MIR SINE MIR 50 262 0 209 362 67 13 chr10 121666161 121666310 -23922978 + MER5B DNA MER1_type 21 177 -1 23 33 0 0 chr10 121669297 121669327 -23919961 + GC_rich Low_complexity Low_complexity 1 30 0 25 0 0 0 chr10 121669994 121670019 -23919269 + GC_rich Low_complexity Low_complexity 1 25 0 23 54 0 0 chr10 121670468 121670505 -23918783 + GC_rich Low_complexity Low_complexity 1 37 0 24 53 0 0 chr10 121670765 121670803 -23918485 + GC_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr10 121670939 121670961 -23918327 + GC_rich Low_complexity Low_complexity 1 22 0 29 47 0 0 chr10 121672776 121672819 -23916469 + AT_rich Low_complexity Low_complexity 1 43 0 767 285 41 21 chr10 121672828 121673070 -23916218 - MIR SINE MIR 0 262 16 368 273 43 30 chr10 121673518 121673668 -23915620 - MIR3 SINE MIR -13 195 39 500 292 49 7 chr10 121676044 121676188 -23913100 + MIR3 SINE MIR 20 169 -39 436 284 14 7 chr10 121676320 121676461 -23912827 + MER103 DNA DNA 25 166 0 209 206 0 15 chr10 121676753 121676821 -23912467 + (TG)n Simple_repeat Simple_repeat 2 68 0 444 244 58 13 chr10 121677267 121677423 -23911865 - LTR33 LTR ERVL -24 497 335 218 254 0 0 chr10 121678015 121678070 -23911218 + C-rich Low_complexity Low_complexity 6 60 0 257 244 12 37 chr10 121678077 121678159 -23911129 + MER5B DNA MER1_type 14 93 -85 261 242 212 38 chr10 121678205 121678337 -23910951 + L2 LINE L2 3158 3312 -1 449 164 0 0 chr10 121679197 121679270 -23910018 - MIR SINE MIR -100 162 90 409 221 12 0 chr10 121679279 121679365 -23909923 + MER33 DNA MER1_type 1 87 -237 1960 107 84 28 chr10 121679883 121680238 -23909050 - THE1C LTR MaLR 0 375 1 193 298 165 8 chr10 121680958 121681079 -23908209 - L2 LINE L2 -1 3271 3132 2290 100 0 0 chr10 121682105 121682395 -23906893 + AluSc SINE Alu 1 290 -19 599 299 11 0 chr10 121682570 121682744 -23906544 - MER117 DNA MER1_type -16 181 6 384 299 60 8 chr10 121683838 121683972 -23905316 + MIR SINE MIR 103 243 -19 182 256 128 26 chr10 121685051 121685129 -23904159 - MIR SINE MIR -112 150 65 385 243 83 18 chr10 121685337 121685528 -23903760 - MIR SINE MIR -19 243 35 203 278 241 0 chr10 121686877 121686985 -23902303 - L2 LINE L2 0 3313 3180 532 251 102 32 chr10 121687114 121687302 -23901986 + MIR SINE MIR 61 259 -3 182 286 0 71 chr10 121687814 121687898 -23901390 + MIR SINE MIR 29 106 -102 598 221 0 0 chr10 121687959 121688072 -23901216 + MER81 DNA DNA 2 114 0 25 0 0 0 chr10 121688874 121688899 -23900389 + AT_rich Low_complexity Low_complexity 1 25 0 183 360 12 0 chr10 121689313 121689399 -23899889 - MIR SINE MIR -115 147 61 219 146 0 0 chr10 121689695 121689736 -23899552 + (TC)n Simple_repeat Simple_repeat 2 42 0 465 19 0 0 chr10 121689736 121689790 -23899498 + (CA)n Simple_repeat Simple_repeat 1 54 0 185 331 53 71 chr10 121690526 121690695 -23898593 - L2 LINE L2 -10 3262 3097 642 269 9 47 chr10 121691763 121691975 -23897313 - MLT1K LTR MaLR 0 588 385 198 0 0 0 chr10 121692707 121692729 -23896559 + (CAT)n Simple_repeat Simple_repeat 2 23 0 1892 195 47 75 chr10 121693626 121694196 -23895092 + MLT2B3 LTR ERVL 1 554 0 236 284 135 0 chr10 121694646 121694720 -23894568 - L2 LINE L2 0 3313 3230 232 316 0 13 chr10 121695123 121695199 -23894089 - L1MC/D LINE L1 -2222 5586 5512 328 259 215 9 chr10 121695758 121696102 -23893186 - L1ME4a LINE L1 0 6121 5707 236 350 62 0 chr10 121696146 121696226 -23893062 + L2 LINE L2 3169 3253 -19 311 310 110 0 chr10 121696231 121696386 -23892902 - MIR SINE MIR 0 262 91 377 286 96 28 chr10 121696648 121696826 -23892462 - MIR SINE MIR -65 197 8 2123 154 3 0 chr10 121696932 121697243 -23892045 - AluSx SINE Alu 0 312 1 182 347 116 21 chr10 121698113 121698208 -23891080 - MIR SINE MIR -69 139 36 443 281 112 45 chr10 121698337 121698604 -23890684 - LTR33 LTR ERVL -236 285 1 1691 38 0 0 chr10 121698700 121698910 -23890378 + L1PA5 LINE L1 5939 6148 -6 355 250 131 25 chr10 121699655 121699815 -23889473 + L2 LINE L2 2641 2817 -497 202 316 53 0 chr10 121700235 121700311 -23888977 + L2 LINE L2 3184 3263 -50 1549 183 50 30 chr10 121700912 121701213 -23888075 - AluJo SINE Alu -5 307 1 249 33 0 0 chr10 121701258 121701288 -23888000 + (T)n Simple_repeat Simple_repeat 1 30 0 21 36 0 0 chr10 121701404 121701432 -23887856 + AT_rich Low_complexity Low_complexity 1 28 0 2033 254 101 49 chr10 121701597 121702167 -23887121 - L1MC4a LINE L1 -743 5403 4864 468 108 60 0 chr10 121702167 121702250 -23887038 - L1PA13 LINE L1 0 6163 6076 2033 254 101 49 chr10 121702250 121702389 -23886899 - L1MC4a LINE L1 -1282 4864 5115 1625 172 15 55 chr10 121702389 121702714 -23886574 - AluJo SINE Alu 0 312 1 2033 254 101 49 chr10 121702714 121703228 -23886060 - L1MC4a LINE L1 -1030 5116 4630 351 325 67 0 chr10 121703272 121703392 -23885896 + MIR SINE MIR 5 132 -130 426 259 56 34 chr10 121704632 121704800 -23884488 - MIR3 SINE MIR -51 157 3 290 288 15 83 chr10 121704932 121705064 -23884224 + MIR SINE MIR 30 152 -56 429 265 20 26 chr10 121705147 121705298 -23883990 - MLT1K LTR MaLR -27 561 412 230 300 172 4 chr10 121706066 121706293 -23882995 + L2 LINE L2 2881 3145 -168 231 118 0 0 chr10 121707042 121707076 -23882212 - MIR SINE MIR -113 149 116 847 213 6 6 chr10 121707858 121708041 -23881247 - MER53 DNA DNA 0 189 7 431 277 36 42 chr10 121709477 121709643 -23879645 - MIR SINE MIR -8 254 90 507 265 89 40 chr10 121710641 121710879 -23878409 - MIR SINE MIR -1 261 14 276 278 19 9 chr10 121710875 121710983 -23878305 + MER5A DNA MER1_type 9 117 -72 * 1463 151 25 88 chr10 121711190 121711509 -23877779 + MLT2D LTR ERVL 1 299 -115 387 0 0 0 chr10 121711518 121711561 -23877727 + (TC)n Simple_repeat Simple_repeat 1 43 0 542 277 42 61 chr10 121712022 121712443 -23876845 - L1MEc LINE L1 -4880 1400 1040 319 385 47 24 chr10 121712683 121712896 -23876392 - L1MEc LINE L1 -6000 563 346 1549 180 78 28 chr10 121713045 121713329 -23875959 - AluJb SINE Alu -14 298 1 472 357 62 4 chr10 121713377 121713604 -23875684 - MIR SINE MIR -22 240 1 348 290 94 0 chr10 121713871 121714009 -23875279 - MIR3 SINE MIR -25 183 33 1797 250 76 6 chr10 121714012 121714496 -23874792 - LTR33 LTR ERVL -2 519 2 502 277 138 0 chr10 121715374 121715533 -23873755 - MIR SINE MIR -34 228 48 427 296 31 37 chr10 121716130 121716292 -23872996 - MIR SINE MIR -15 247 87 666 285 80 45 chr10 121717161 121717648 -23871640 + L2 LINE L2 2800 3313 0 2417 108 0 0 chr10 121717771 121718076 -23871212 - AluSc SINE Alu -4 305 1 1213 251 58 28 chr10 121718110 121718504 -23870784 + MLT1I LTR MaLR 2 407 -2 426 246 82 0 chr10 121718637 121718759 -23870529 - MIR SINE MIR -28 234 103 608 242 146 0 chr10 121718760 121718925 -23870363 + MER5A DNA MER1_type 1 189 0 254 224 0 17 chr10 121719912 121719970 -23869318 - L2 LINE L2 -2 3270 3214 180 292 0 0 chr10 121720438 121720510 -23868778 - MIR SINE MIR -101 107 36 553 272 120 5 chr10 121721065 121721256 -23868032 + MIR SINE MIR 37 249 -13 317 115 0 73 chr10 121721332 121721428 -23867860 + (GAAA)n Simple_repeat Simple_repeat 4 92 0 243 315 120 0 chr10 121722292 121722400 -23866888 + MIR SINE MIR 107 227 -35 22 0 0 0 chr10 121723821 121723843 -23865445 + AT_rich Low_complexity Low_complexity 1 22 0 8857 223 61 14 chr10 121723843 121727346 -23861942 - L1PA16 LINE L1 -196 6673 2747 621 168 0 18 chr10 121727345 121727458 -23861830 - L1M3 LINE L1 -607 5564 5454 * 22 56 0 0 chr10 121727458 121727494 -23861794 + AT_rich Low_complexity Low_complexity 1 36 0 28 29 0 0 chr10 121727570 121727605 -23861683 + AT_rich Low_complexity Low_complexity 1 35 0 1630 196 21 3 chr10 121728183 121728509 -23860779 - MER44D DNA MER2_type -6 603 2 535 235 25 0 chr10 121728536 121728673 -23860615 - MIR SINE MIR -61 147 37 554 288 15 3 chr10 121730071 121730247 -23859041 - MIR SINE MIR -23 185 3 364 277 84 24 chr10 121731778 121731944 -23857344 + L3 LINE CR1 736 911 -666 736 290 65 38 chr10 121732103 121732232 -23857056 - L1ME4a LINE L1 -93 6028 5904 1848 144 28 14 chr10 121732232 121732523 -23856765 - AluJb SINE Alu -17 295 1 736 290 65 38 chr10 121732523 121733024 -23856264 - L1ME4a LINE L1 -217 5904 5381 181 182 0 0 chr10 121733548 121733581 -23855707 + L2 LINE L2 3278 3310 -3 207 262 0 33 chr10 121734186 121734247 -23855041 + (CATATA)n Simple_repeat Simple_repeat 2 60 0 432 311 105 14 chr10 121734883 121735092 -23854196 + MIR SINE MIR 7 234 -28 24 0 0 0 chr10 121735488 121735512 -23853776 + AT_rich Low_complexity Low_complexity 1 24 0 206 293 57 28 chr10 121736882 121736988 -23852300 - MIR SINE MIR 0 262 154 1282 244 71 60 chr10 121737043 121737494 -23851794 - MLT1K LTR MaLR -72 516 61 337 236 66 11 chr10 121737550 121737656 -23851632 - MIR SINE MIR -65 143 34 1002 246 47 61 chr10 121738338 121738764 -23850524 - MER113 DNA MER1_type? -12 509 90 1502 196 29 61 chr10 121738779 121739187 -23850101 - MLT2C1 LTR ERVL -2 395 1 252 247 134 10 chr10 121740415 121740512 -23848776 + MER117 DNA MER1_type 8 116 -81 477 285 53 87 chr10 121740919 121741298 -23847990 - MLT1J LTR MaLR -53 458 53 281 301 60 8 chr10 121741547 121741680 -23847608 + MER117 DNA MER1_type 8 147 -50 409 267 72 86 chr10 121742002 121742294 -23846994 - MLT1L LTR MaLR 0 607 224 1523 294 12 5 chr10 121742528 121742956 -23846332 + LTR16B LTR ERVL 32 462 -2 205 205 0 0 chr10 121743130 121743169 -23846119 + T-rich Low_complexity Low_complexity 1 39 0 277 239 86 51 chr10 121743174 121743291 -23845997 - L2 LINE L2 -6 3266 3146 221 288 0 0 chr10 121744033 121744099 -23845189 + L2 LINE L2 2990 3055 -258 28 0 0 0 chr10 121744805 121744833 -23844455 + AT_rich Low_complexity Low_complexity 1 28 0 7114 66 3 2 chr10 121744843 121746481 -23842807 - L1PA8 LINE L1 -2 6170 4534 296 202 83 71 chr10 121748673 121748757 -23840531 - MER5A DNA MER1_type -94 95 11 265 339 140 7 chr10 121750247 121750533 -23838755 - L2 LINE L2 -676 2638 2315 234 0 0 0 chr10 121751342 121751368 -23837920 + (TC)n Simple_repeat Simple_repeat 1 26 0 280 272 52 15 chr10 121752181 121752317 -23836971 + L1MC/D LINE L1 5631 5771 -2037 2021 249 93 6 chr10 121752436 121753242 -23836046 + L1MD3 LINE L1 2425 3300 -2846 * 3862 245 97 15 chr10 121753234 121754105 -23835183 + L1MD3 LINE L1 4010 4808 -3187 2375 92 0 3 chr10 121754105 121754408 -23834880 + AluSg SINE Alu 4 305 -5 3862 245 97 15 chr10 121754408 121757086 -23832202 + L1MD3 LINE L1 4808 7985 -10 365 289 47 78 chr10 121757168 121757424 -23831864 + L1MEd LINE L1 862 1109 -5010 863 243 66 52 chr10 121757529 121757891 -23831397 - L1MC3 LINE L1 -1372 6413 6047 446 265 22 15 chr10 121757898 121758034 -23831254 - MIR SINE MIR -94 168 32 297 277 21 11 chr10 121758818 121758912 -23830376 + L2 LINE L2 3217 3311 -2 1686 158 40 7 chr10 121759012 121759285 -23830003 - AluJb SINE Alu -30 282 1 548 264 132 18 chr10 121760722 121761002 -23828286 + LTR33 LTR ERVL 207 518 -3 526 246 0 0 chr10 121761030 121761152 -23828136 + MIR3 SINE MIR 33 154 -54 269 232 100 77 chr10 121761403 121761623 -23827665 - LTR16A1 LTR ERVL -179 278 54 227 299 0 65 chr10 121762108 121762215 -23827073 - MIR SINE MIR -90 118 19 262 266 48 40 chr10 121762231 121762355 -23826933 - L2 LINE L2 -1 3312 3188 224 302 79 16 chr10 121763999 121764125 -23825163 - MIR SINE MIR -43 219 86 1816 180 102 10 chr10 121764134 121764518 -23824770 - MSTB1 LTR MaLR -13 419 1 204 326 12 35 chr10 121764755 121764841 -23824447 - MIR SINE MIR -74 188 105 390 310 122 14 chr10 121764875 121765088 -23824200 + MIR SINE MIR 27 262 0 182 379 0 0 chr10 121765184 121765250 -23824038 + L2 LINE L2 3206 3271 -1 257 189 54 0 chr10 121765559 121765633 -23823655 + (TA)n Simple_repeat Simple_repeat 1 78 0 234 300 0 0 chr10 121766619 121766689 -23822599 + GA-rich Low_complexity Low_complexity 2 71 0 521 222 56 14 chr10 121766704 121766848 -23822440 - MIR SINE MIR -78 184 35 1869 147 0 0 chr10 121767687 121767952 -23821336 - AluSx SINE Alu -13 299 35 1957 149 0 7 chr10 121768969 121769265 -23820023 + AluSx SINE Alu 1 294 -18 378 138 0 0 chr10 121769313 121769371 -23819917 - AluSc SINE Alu -3 296 239 4311 130 6 0 chr10 121769770 121770422 -23818866 + L1PA16 LINE L1 5509 6164 -2 566 335 36 18 chr10 121770649 121770873 -23818415 - MIR SINE MIR -20 242 15 275 339 85 18 chr10 121771023 121771188 -23818100 - MIR SINE MIR -71 191 16 180 300 50 30 chr10 121772550 121772650 -23816638 + MER5B DNA MER1_type 77 178 0 1299 339 107 33 chr10 121773359 121774496 -23814792 - L2 LINE L2 -543 2771 1551 630 293 114 22 chr10 121774634 121774907 -23814381 + L3 LINE CR1 1269 1566 -11 365 275 371 6 chr10 121775229 121775407 -23813881 + MIR SINE MIR 15 257 -5 182 318 79 0 chr10 121775387 121775450 -23813838 - L2 LINE L2 -7 3306 3239 * 357 289 151 0 chr10 121775782 121775941 -23813347 - MIR SINE MIR -2 260 78 184 299 186 10 chr10 121775986 121776083 -23813205 + L2 LINE L2 3150 3263 -9 189 0 0 0 chr10 121776466 121776487 -23812801 + (TTC)n Simple_repeat Simple_repeat 1 21 0 279 0 0 0 chr10 121776487 121776518 -23812770 + (TTA)n Simple_repeat Simple_repeat 3 33 0 7361 33 1 3 chr10 121776518 121777905 -23811383 - L1PA4 LINE L1 -18 6137 4752 213 298 213 0 chr10 121777993 121778134 -23811154 + L2 LINE L2 2894 3064 -208 647 338 62 19 chr10 121778899 121779363 -23809925 + MLT1K LTR MaLR 78 561 -27 1250 150 51 80 chr10 121780022 121780296 -23808992 + MSTB LTR MaLR 161 426 0 328 305 0 0 chr10 121780603 121780685 -23808603 - MER5B DNA MER1_type -1 177 96 296 194 382 0 chr10 121781494 121781638 -23807650 + MIR SINE MIR 5 203 -59 884 255 44 38 chr10 121782394 121782640 -23806648 + LTR16C LTR ERVL 146 396 -95 2046 138 37 11 chr10 121782640 121782995 -23806293 - THE1B LTR MaLR 0 364 1 884 255 44 38 chr10 121782995 121783089 -23806199 + LTR16C LTR ERVL 396 488 -3 268 338 156 31 chr10 121784217 121784869 -23804419 - L2 LINE L2 0 3272 2543 454 241 64 28 chr10 121784930 121785071 -23804217 + MIR SINE MIR 6 151 -111 207 222 37 19 chr10 121786859 121786913 -23802375 + MIR SINE MIR 58 112 -150 344 274 23 69 chr10 121787125 121787300 -23801988 + L1MEd LINE L1 12 178 -5941 250 256 26 70 chr10 121787873 121788029 -23801259 + L1MCa LINE L1 6 154 -6272 2727 184 65 14 chr10 121788035 121788694 -23800594 + L1MB1 LINE L1 5476 6168 0 1121 264 89 31 chr10 121788693 121789398 -23799890 + L1MCa LINE L1 1850 2595 -4012 * 543 141 0 0 chr10 121789597 121789689 -23799599 + (TG)n Simple_repeat Simple_repeat 1 92 0 328 271 47 0 chr10 121789689 121789774 -23799514 - L1MC4 LINE L1 -1340 6702 6614 363 331 21 28 chr10 121789944 121790086 -23799202 - MIR3 SINE MIR -38 170 30 1454 271 11 14 chr10 121790541 121790987 -23798301 + L1ME1 LINE L1 19 463 -5960 2369 72 0 22 chr10 121791059 121791377 -23797911 + AluY SINE Alu 1 311 0 2576 249 69 34 chr10 121791466 121794711 -23794577 + L1ME1 LINE L1 778 4538 -2423 1816 141 20 30 chr10 121794711 121795015 -23794273 - AluJb SINE Alu -11 301 1 2576 249 69 34 chr10 121795015 121797524 -23791764 + L1ME1 LINE L1 4538 6956 -5 548 256 16 0 chr10 121798152 121798277 -23791011 - MIR SINE MIR -87 175 49 462 310 92 33 chr10 121799175 121799446 -23789842 + MLT1I LTR MaLR 101 387 -22 373 230 47 74 chr10 121800011 121800159 -23789129 + MER5A DNA MER1_type 21 164 -25 198 316 0 18 chr10 121800180 121800237 -23789051 + L3b LINE CR1 1528 1583 0 23 33 0 0 chr10 121800353 121800383 -23788905 + AT_rich Low_complexity Low_complexity 1 30 0 186 299 0 52 chr10 121800414 121800511 -23788777 + L3 LINE CR1 1366 1457 -120 2646 216 77 48 chr10 121800525 121801289 -23787999 + MER45R DNA AcHobo 3 794 -787 2547 52 0 13 chr10 121801289 121801597 -23787691 + AluY SINE Alu 1 304 -7 2646 216 77 48 chr10 121801597 121801648 -23787640 + MER45R DNA AcHobo 794 842 -739 2002 124 84 93 chr10 121801650 121801892 -23787396 - Tigger2 DNA MER2_type 0 2718 2480 2133 113 0 20 chr10 121801892 121802194 -23787094 + AluSg SINE Alu 1 296 -14 2002 124 84 93 chr10 121802194 121802401 -23786887 - Tigger2 DNA MER2_type -238 2480 2273 405 123 0 55 chr10 121802391 121802464 -23786824 - Tigger2 DNA MER2_type -2649 69 1 * 2641 171 42 45 chr10 121802464 121802677 -23786611 + MER45R DNA AcHobo 843 1055 -526 1785 171 3 27 chr10 121802677 121802975 -23786313 - AluSx SINE Alu -19 293 3 2641 171 42 45 chr10 121802975 121803502 -23785786 + MER45R DNA AcHobo 1055 1581 0 246 95 0 0 chr10 121804388 121804430 -23784858 + (A)n Simple_repeat Simple_repeat 1 42 0 2636 108 11 0 chr10 121806170 121806541 -23782747 - THE1C LTR MaLR 0 375 1 1943 144 0 0 chr10 121806727 121807012 -23782276 + AluSc SINE Alu 23 307 -2 421 123 0 25 chr10 121807025 121807106 -23782182 + (GGAA)n Simple_repeat Simple_repeat 1 79 0 1014 122 0 7 chr10 121807519 121807658 -23781630 - AluSc SINE Alu -128 181 44 253 91 136 0 chr10 121807658 121807702 -23781586 + MADE1 DNA Mariner 31 80 0 1779 178 54 11 chr10 121808025 121808396 -23780892 + MLT1B LTR MaLR 4 390 0 365 319 76 49 chr10 121808989 121809293 -23779995 + L1ME4a LINE L1 5577 5888 -233 634 291 65 17 chr10 121809302 121809532 -23779756 - MIR SINE MIR -17 245 5 412 172 118 11 chr10 121809589 121809682 -23779606 + AluJb SINE Alu 6 108 -204 195 184 0 0 chr10 121809761 121809799 -23779489 + G-rich Low_complexity Low_complexity 1 38 0 3465 15 0 0 chr10 121810085 121810523 -23778765 - L1P1 LINE L1 -483 5672 5235 437 305 23 0 chr10 121812040 121812171 -23777117 + MIR SINE MIR 126 259 -3 247 196 54 0 chr10 121812173 121812229 -23777059 + GA-rich Low_complexity Low_complexity 3 61 0 294 167 0 0 chr10 121812299 121812347 -23776941 + MER91A DNA MER1_type 1 48 -148 281 370 37 25 chr10 121813243 121813486 -23775802 - MIR SINE MIR -4 258 13 841 308 52 51 chr10 121813908 121814580 -23774708 + L1ME3A LINE L1 73 748 -5648 1716 184 59 21 chr10 121814580 121814955 -23774333 + MLT1B LTR MaLR 1 389 -1 841 308 52 51 chr10 121814955 121815033 -23774255 + L1ME3A LINE L1 748 824 -5572 2632 247 38 4 chr10 121815034 121815779 -23773509 + L1P4 LINE L1 2106 2875 -3271 4214 169 2 13 chr10 121815780 121816866 -23772422 + L1P4 LINE L1 4457 5528 -633 342 169 52 0 chr10 121816866 121816943 -23772345 + L1PA15 LINE L1 6081 6161 -4 1913 263 91 31 chr10 121816948 121817186 -23772102 + L1ME3A LINE L1 820 1042 -5173 2040 165 7 77 chr10 121817186 121817628 -23771660 - MLT2D LTR ERVL 0 414 4 1913 263 91 31 chr10 121817628 121819419 -23769869 + L1ME3A LINE L1 1042 2939 -3276 3079 101 21 2 chr10 121819440 121819907 -23769381 - L1PA7 LINE L1 -1912 4234 3759 1671 72 19 30 chr10 121819909 121820172 -23769116 + L1PA7 LINE L1 4237 4496 -1650 6462 63 38 3 chr10 121820172 121821383 -23767905 + L1PA7 LINE L1 4909 6150 -4 892 191 86 16 chr10 121821377 121821680 -23767608 + L1ME3A LINE L1 2969 3292 -2923 43 20 0 0 chr10 121821758 121821808 -23767480 + AT_rich Low_complexity Low_complexity 1 50 0 3285 194 70 153 chr10 121822480 121823304 -23765984 + L1MC4a LINE L1 6214 7105 -703 183 80 0 0 chr10 121823304 121823329 -23765959 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 3285 194 70 153 chr10 121823329 121823344 -23765944 + L1MC4a LINE L1 7105 7120 -688 1964 130 0 7 chr10 121823344 121823657 -23765631 - AluY SINE Alu 0 311 1 3285 194 70 153 chr10 121823657 121823865 -23765423 + L1MC4a LINE L1 7120 7344 -464 478 248 25 0 chr10 121823865 121823986 -23765302 + MLT1F1 LTR MaLR 2 125 -442 3285 194 70 153 chr10 121823986 121824554 -23764734 + L1MC4a LINE L1 7344 7807 -1 2622 259 97 15 chr10 121824684 121826253 -23763035 + L1ME3A LINE L1 4488 6204 -35 500 215 116 8 chr10 121826916 121827037 -23762251 - AluJo SINE Alu -178 134 1 1857 178 58 6 chr10 121827070 121827435 -23761853 + MLT1B LTR MaLR 5 388 -2 338 199 184 59 chr10 121827789 121827925 -23761363 + MIR SINE MIR 67 219 -43 995 156 0 48 chr10 121828303 121828470 -23760818 - AluJb SINE Alu -24 288 130 5489 100 33 1 chr10 121828483 121829323 -23759965 - L1PA11 LINE L1 -3 6171 5305 622 257 21 27 chr10 121831501 121831688 -23757600 + AluJb SINE Alu 1 186 -126 590 162 45 0 chr10 121932446 121932557 -23656731 - FLAM_A SINE Alu -4 138 23 350 294 39 19 chr10 121934270 121934398 -23654890 + MER5A DNA MER1_type 9 125 -53 291 259 84 49 chr10 121935382 121935525 -23653763 + L2 LINE L2 2995 3142 -171 1164 238 134 22 chr10 121935544 121935909 -23653379 + MLT1F LTR MaLR 27 432 -110 621 227 61 25 chr10 121935909 121936072 -23653216 + L2 LINE L2 3140 3308 -5 263 174 0 0 chr10 121936727 121936773 -23652515 + MER5B DNA MER1_type 1 46 -132 1310 227 233 8 chr10 121936775 121937286 -23652002 + LTR50 LTR ERVL 3 628 -167 243 315 90 18 chr10 121937359 121937470 -23651818 - MER5B DNA MER1_type -40 138 20 390 298 19 88 chr10 121939134 121939303 -23649985 + MIR SINE MIR 32 180 -82 413 232 18 45 chr10 121939303 121939415 -23649873 + MER81 DNA DNA 3 111 -3 390 298 19 88 chr10 121939415 121939492 -23649796 + MIR SINE MIR 180 261 -1 876 168 0 0 chr10 121941010 121941147 -23648141 - FLAM_C SINE Alu -6 137 1 292 355 54 42 chr10 121941481 121941647 -23647641 + MIR SINE MIR 15 182 -80 409 274 27 75 chr10 121941984 121942170 -23647118 - MIR SINE MIR -24 238 62 1815 167 0 41 chr10 121942286 121942603 -23646685 - AluJo SINE Alu -8 304 1 240 313 37 25 chr10 121943709 121943952 -23645336 - L1ME LINE L1 -199 5922 5677 475 278 0 17 chr10 121945268 121945383 -23643905 - L2 LINE L2 -20 3293 3181 782 151 0 40 chr10 121945411 121945450 -23643838 + AluJb SINE Alu 2 41 -271 4870 88 8 3 chr10 121945450 121946107 -23643181 - PABL_A LTR ERV1 0 660 1 782 151 0 40 chr10 121946107 121946193 -23643095 + AluJb SINE Alu 41 122 -190 188 33 0 33 chr10 121946194 121946224 -23643064 + (TAAAA)n Simple_repeat Simple_repeat 3 31 0 901 175 21 21 chr10 121946282 121946471 -23642817 + MER53 DNA DNA 1 189 0 899 213 144 0 chr10 121946606 121946808 -23642480 - MIR SINE MIR -21 241 11 319 351 97 0 chr10 121947568 121947702 -23641586 - MIR SINE MIR -96 166 20 35 24 0 0 chr10 121948506 121948548 -23640740 + AT_rich Low_complexity Low_complexity 1 42 0 218 390 9 0 chr10 121948743 121948848 -23640440 - MIR SINE MIR -73 135 30 480 291 167 33 chr10 121949577 121950130 -23639158 - L2 LINE L2 -1 3312 2601 2070 132 89 3 chr10 121950309 121950636 -23638652 - LTR18A LTR ERVL 0 357 3 491 281 47 36 chr10 121952372 121952564 -23636724 - MIR SINE MIR -51 211 18 464 213 144 32 chr10 121953098 121953263 -23636025 + MER5A DNA MER1_type 4 189 0 1474 204 18 11 chr10 121953524 121953804 -23635484 - AluJo SINE Alu -30 282 1 605 313 9 37 chr10 121953834 121954048 -23635240 + MIR SINE MIR 49 256 -6 231 228 61 61 chr10 121954231 121954345 -23634943 - MIR SINE MIR -73 189 76 636 266 79 37 chr10 121954604 121955033 -23634255 + MER113 DNA MER1_type? 2 448 -73 804 250 23 39 chr10 121955162 121955422 -23633866 + MIR SINE MIR 4 259 -3 225 0 0 0 chr10 121955424 121955449 -23633839 + (CTG)n Simple_repeat Simple_repeat 1 25 0 880 233 117 50 chr10 121955726 121956028 -23633260 + MLT1I LTR MaLR 8 341 -68 1943 110 92 0 chr10 121956028 121956309 -23632979 - AluSq SINE Alu -5 308 2 880 233 117 50 chr10 121956309 121956383 -23632905 + MLT1I LTR MaLR 341 409 0 3128 65 9 12 chr10 121956443 121956874 -23632414 - L1MA1 LINE L1 0 6302 5873 1709 181 37 37 chr10 121956875 121957250 -23632038 + THE1C LTR MaLR 1 375 0 9298 143 21 30 chr10 121957252 121958843 -23630445 + THE1C-int LTR MaLR 3 1580 0 928 142 0 19 chr10 121958843 121958998 -23630290 + THE1C LTR MaLR 1 152 -223 2822 158 32 6 chr10 121959004 121959541 -23629747 - L1 LINE L1 -1810 5755 5205 18512 166 40 11 chr10 121959549 121963889 -23625399 - L1 LINE L1 -3083 4482 13 198 306 20 0 chr10 121964236 121964285 -23625003 - L3 LINE CR1 -106 1471 1422 513 292 0 0 chr10 121964397 121964527 -23624761 + MER94 DNA DNA 1 130 -4 3555 179 39 39 chr10 121966161 121966984 -23622304 + L1MC2 LINE L1 5483 7770 -15 401 254 30 25 chr10 121967018 121967215 -23622073 + L1ME3A LINE L1 2512 2709 -3437 2640 272 122 38 chr10 121968133 121970302 -23618986 + L1ME3A LINE L1 2815 5165 -981 1036 292 67 19 chr10 121970415 121970619 -23618669 + L1ME3A LINE L1 5386 5579 -591 963 213 154 18 chr10 121970619 121970788 -23618500 - MLT1B LTR MaLR 0 390 246 198 0 0 0 chr10 121970788 121970810 -23618478 + (GA)n Simple_repeat Simple_repeat 1 22 0 963 213 154 18 chr10 121970810 121970983 -23618305 - MLT1B LTR MaLR -144 246 1 1036 292 67 19 chr10 121970983 121971343 -23617945 + L1ME3A LINE L1 5579 5977 -193 348 259 85 65 chr10 121971345 121971378 -23617910 - L1MEc LINE L1 -4813 1583 1552 2239 84 7 14 chr10 121971378 121971675 -23617613 + AluY SINE Alu 1 295 -16 348 259 85 65 chr10 121971675 121971842 -23617446 - L1MEc LINE L1 -4844 1552 1379 2078 209 41 2 chr10 121972094 121972529 -23616759 - MER82 DNA MER2_type 0 653 202 475 253 12 59 chr10 121972976 121973146 -23616142 - MER82 DNA MER2_type -491 162 1 1540 134 0 9 chr10 121973828 121974059 -23615229 - MLT1B LTR MaLR 0 390 162 684 181 0 36 chr10 121974077 121974215 -23615073 - FLAM_A SINE Alu 0 142 10 1070 169 27 6 chr10 121974217 121974400 -23614888 - MLT1B LTR MaLR -203 187 1 * 1561 196 109 119 chr10 121974393 121975092 -23614196 - MER50 LTR ERV1 0 734 43 6075 109 21 23 chr10 121975232 121976106 -23613182 - MER4D LTR ERV1 0 872 1 254 209 67 38 chr10 121976586 121976691 -23612597 + L1ME3A LINE L1 6054 6161 -9 328 353 49 18 chr10 121977527 121977813 -23611475 - ERVL LTR ERVL -1546 4218 3924 192 97 0 0 chr10 121977954 121977985 -23611303 + (CA)n Simple_repeat Simple_repeat 2 32 0 226 276 26 0 chr10 121978091 121978175 -23611113 - MIR SINE MIR -70 138 48 333 310 103 14 chr10 121978278 121978423 -23610865 + MIR3 SINE MIR 15 172 -36 424 337 21 32 chr10 121979005 121979195 -23610093 - MIR SINE MIR -55 207 20 297 51 0 0 chr10 121979237 121979276 -23610012 + (CA)n Simple_repeat Simple_repeat 1 39 0 370 344 32 0 chr10 121979489 121979646 -23609642 + MIR3 SINE MIR 40 201 -7 35 24 0 0 chr10 121979897 121979939 -23609349 + AT_rich Low_complexity Low_complexity 1 42 0 230 255 20 0 chr10 121980774 121980825 -23608463 - MER91A DNA MER1_type -144 52 1 218 277 19 6 chr10 121981171 121981330 -23607958 + GA-rich Low_complexity Low_complexity 2 162 0 231 282 141 47 chr10 121981893 121982042 -23607246 + MER5A DNA MER1_type 9 171 -18 238 175 88 88 chr10 121981929 121982009 -23607279 - MER5B DNA MER1_type -35 143 64 190 298 24 87 chr10 121982604 121982812 -23606476 + MIR SINE MIR 22 216 -46 2339 188 98 12 chr10 121982855 121983354 -23605934 + MER34 LTR ERV1 1 542 0 180 0 0 0 chr10 121983431 121983451 -23605837 + (TTCC)n Simple_repeat Simple_repeat 4 23 0 328 241 165 61 chr10 121983836 121984097 -23605191 + L2 LINE L2 2847 3134 -179 543 222 99 37 chr10 121984101 121984263 -23605025 - MER5B DNA MER1_type 0 178 7 732 235 57 81 chr10 121984318 121984798 -23604490 + MLT1H LTR MaLR 9 549 0 298 228 0 172 chr10 121984798 121984943 -23604345 + L2 LINE L2 3194 3313 0 776 247 28 5 chr10 121985576 121985814 -23603474 - LTR16C LTR ERVL -10 481 219 401 329 111 0 chr10 121986200 121986407 -23602881 - MIR SINE MIR -21 241 12 1833 157 31 0 chr10 121986522 121986815 -23602473 - AluJb SINE Alu -10 302 1 296 191 184 21 chr10 121986826 121986967 -23602321 + MIR SINE MIR 88 251 -11 184 316 70 44 chr10 121987126 121987240 -23602048 + L2 LINE L2 3150 3266 -6 417 299 134 11 chr10 121987522 121987709 -23601579 - MIR SINE MIR 0 262 53 514 228 88 53 chr10 121987899 121988070 -23601218 + L2 LINE L2 3137 3313 0 506 278 95 24 chr10 121988610 121988779 -23600509 + MIR SINE MIR 67 247 -15 359 326 15 22 chr10 121990169 121990304 -23598984 - L2 LINE L2 0 3313 3180 477 290 58 0 chr10 121990554 121990761 -23598527 - L1ME3A LINE L1 -219 5951 5733 317 298 0 0 chr10 121991345 121991429 -23597859 + MIR SINE MIR 58 141 -121 259 300 15 22 chr10 121993024 121993122 -23596166 + MIR SINE MIR 16 108 -103 394 330 22 28 chr10 121993356 121993535 -23595753 - MIR3 SINE MIR -13 195 18 1339 288 78 12 chr10 121993795 121994284 -23595004 + LTR33 LTR ERVL 1 521 0 30 27 0 0 chr10 121994854 121994891 -23594397 + AT_rich Low_complexity Low_complexity 1 37 0 733 197 180 0 chr10 121994989 121995172 -23594116 + MER58A DNA MER1_type 9 224 0 406 332 2 0 chr10 121997588 121997757 -23591531 + L1MC4a LINE L1 4018 4187 -1959 194 62 31 0 chr10 121997865 121997897 -23591391 + (TCTA)n Simple_repeat Simple_repeat 4 36 0 302 290 171 74 chr10 121997900 121998456 -23590832 + L1MC4a LINE L1 4451 5060 -1086 898 285 91 40 chr10 121998629 121999236 -23590052 + L1MC4a LINE L1 5315 5952 -1856 22 70 0 0 chr10 121999388 121999431 -23589857 + AT_rich Low_complexity Low_complexity 1 43 0 263 315 65 0 chr10 122000277 122000385 -23588903 - L2 LINE L2 -9 3263 3149 238 292 94 97 chr10 122000470 122000737 -23588551 - L2 LINE L2 -39 3233 2968 2388 94 3 7 chr10 122001962 122002271 -23587017 + AluSc SINE Alu 1 308 -1 2802 127 51 9 chr10 122002411 122002844 -23586444 - L1PA16 LINE L1 -10 6156 5706 460 207 85 85 chr10 122002885 122003073 -23586215 + L1ME LINE L1 5602 5789 -332 195 307 175 0 chr10 122003186 122003300 -23585988 + MIR SINE MIR 129 262 0 942 199 125 73 chr10 122003693 122004116 -23585172 - LTR56 LTR ERV1 0 445 1 202 289 91 5 chr10 122004122 122004242 -23585046 + MIR SINE MIR 25 154 -80 2435 65 0 0 chr10 122004956 122005250 -23584038 + AluY SINE Alu 1 294 -17 249 304 47 47 chr10 122005250 122005421 -23583867 + L2 LINE L2 2887 3057 -215 930 204 23 17 chr10 122005739 122005915 -23583373 + MER5B DNA MER1_type 2 178 0 500 227 98 55 chr10 122006644 122006807 -23582481 - MER69A DNA AcHobo -5 172 3 195 209 154 82 chr10 122007235 122007345 -23581943 + L2 LINE L2 3147 3264 -8 391 365 20 4 chr10 122009364 122009613 -23579675 + L1ME2 LINE L1 292 544 -6019 639 290 47 16 chr10 122009892 122010209 -23579079 + L1ME2 LINE L1 1184 1510 -4874 1643 268 58 61 chr10 122010301 122011194 -23578094 + L1ME2 LINE L1 1827 2679 -3703 2105 91 12 73 chr10 122011194 122011524 -23577764 - AluY SINE Alu -1 310 1 1643 268 58 61 chr10 122011524 122012008 -23577280 + L1ME2 LINE L1 2679 3163 -3219 2042 122 0 24 chr10 122012017 122012329 -23576959 + AluSx SINE Alu 1 305 0 671 82 21 0 chr10 122012332 122012429 -23576859 + L1MA1 LINE L1 6099 6197 -105 2514 237 119 20 chr10 122012491 122013435 -23575853 + L1ME2 LINE L1 4225 5261 -1121 997 226 47 38 chr10 122013435 122013760 -23575528 + L1ME2 LINE L1 6076 6568 -2 2033 111 52 0 chr10 122013784 122014073 -23575215 + AluSp SINE Alu 1 304 -9 396 265 202 22 chr10 122015621 122015844 -23573444 + L2 LINE L2 664 926 -2388 626 308 36 31 chr10 122015876 122016100 -23573188 + MIR SINE MIR 27 251 -11 1000 324 107 36 chr10 122016103 122016889 -23572399 + L2 LINE L2 931 1772 -1542 459 267 125 41 chr10 122016904 122017368 -23571920 - L1MC5 LINE L1 -38 7923 7421 948 314 35 12 chr10 122017478 122017901 -23571387 + L2 LINE L2 1921 2353 -961 1585 141 8 4 chr10 122017908 122018150 -23571138 + AluSx SINE Alu 1 243 -69 2269 68 3 29 chr10 122018654 122018961 -23570327 + AluY SINE Alu 1 299 -12 266 372 139 8 chr10 122019084 122019213 -23570075 + L2 LINE L2 3127 3272 0 358 271 96 27 chr10 122019821 122020009 -23569279 - L1ME3A LINE L1 -230 5940 5740 218 164 0 36 chr10 122021074 122021129 -23568159 + (TAA)n Simple_repeat Simple_repeat 2 54 0 296 317 134 7 chr10 122021939 122022081 -23567207 + MIR SINE MIR 9 168 -94 283 293 120 30 chr10 122022106 122022239 -23567049 + L2 LINE L2 3167 3311 -2 328 360 58 6 chr10 122023533 122023705 -23565583 - MIR SINE MIR -51 211 31 257 303 119 18 chr10 122024855 122024964 -23564324 - L2 LINE L2 -10 3262 3143 343 309 16 8 chr10 122025094 122025217 -23564071 - MIR SINE MIR -1 261 138 1267 244 50 37 chr10 122025378 122025724 -23563564 - LTR37B LTR ERV1 0 468 113 965 231 103 0 chr10 122025724 122025927 -23563361 - MER58A DNA MER1_type 0 224 1 1267 244 50 37 chr10 122025927 122026038 -23563250 - LTR37B LTR ERV1 -355 113 5 421 278 56 35 chr10 122026360 122026504 -23562784 + MIR SINE MIR 110 256 -6 478 246 69 46 chr10 122026836 122027011 -23562277 - MIR SINE MIR -74 188 10 337 299 22 22 chr10 122027900 122028037 -23561251 + LTR67 LTR ERVL 418 554 -3 240 269 195 9 chr10 122028540 122028679 -23560609 - MIR SINE MIR -63 145 6 539 228 49 41 chr10 122029437 122029560 -23559728 - FLAM_A SINE Alu -8 125 2 243 88 0 0 chr10 122029631 122029665 -23559623 + (TCCA)n Simple_repeat Simple_repeat 2 35 0 397 312 128 30 chr10 122029771 122030005 -23559283 - MIR SINE MIR -5 257 1 294 29 0 0 chr10 122030107 122030142 -23559146 + (TG)n Simple_repeat Simple_repeat 2 36 0 1063 258 98 51 chr10 122030545 122031037 -23558251 - LTR33 LTR ERVL -6 515 1 228 35 0 0 chr10 122031800 122031829 -23557459 + (TG)n Simple_repeat Simple_repeat 1 29 0 209 194 0 0 chr10 122031982 122032018 -23557270 + (CA)n Simple_repeat Simple_repeat 1 36 0 265 236 75 14 chr10 122033355 122033459 -23555829 + MLT1J LTR MaLR 110 285 -330 2480 230 58 6 chr10 122033476 122034114 -23555174 + L1ME1 LINE L1 5448 6118 -48 656 267 86 31 chr10 122034433 122034877 -23554411 - LTR33A LTR ERVL -18 505 1 1353 195 160 26 chr10 122035249 122035593 -23553695 + MLT1B LTR MaLR 1 390 0 457 241 270 0 chr10 122036689 122036826 -23552462 + MER5A DNA MER1_type 9 182 -7 1078 218 82 51 chr10 122037399 122037730 -23551558 + MLT1B LTR MaLR 1 341 -49 618 216 0 0 chr10 122038038 122038135 -23551153 + MER81 DNA DNA 18 114 0 400 291 101 27 chr10 122038205 122038353 -23550935 + MIR3 SINE MIR 36 194 -14 218 244 128 47 chr10 122038443 122038529 -23550759 - L2 LINE L2 -49 3264 3172 279 265 343 0 chr10 122038616 122038718 -23550570 + MER5A DNA MER1_type 46 182 -7 2362 124 24 32 chr10 122038763 122039141 -23550147 - THE1C LTR MaLR 0 375 1 338 381 23 5 chr10 122039144 122039359 -23549929 - L2 LINE L2 -359 2955 2737 1988 143 0 3 chr10 122041002 122041313 -23547975 - AluSx SINE Alu 0 310 1 184 378 55 18 chr10 122041395 122041559 -23547729 - L3 LINE CR1 -837 740 571 1771 169 3 10 chr10 122042077 122042379 -23546909 - AluJb SINE Alu -7 305 6 687 276 52 36 chr10 122042895 122043087 -23546201 - MER82 DNA MER2_type 0 653 459 2493 66 0 10 chr10 122043099 122043265 -23546023 - AluY SINE Alu -13 298 135 2549 57 0 0 chr10 122043265 122043566 -23545722 - AluY SINE Alu -10 301 1 2493 66 0 10 chr10 122043566 122043700 -23545588 - AluY SINE Alu -176 135 1 27 29 0 0 chr10 122043701 122043735 -23545553 + AT_rich Low_complexity Low_complexity 1 34 0 2510 174 24 4 chr10 122043807 122044260 -23545028 - MER82 DNA MER2_type -190 463 2 2105 139 32 32 chr10 122045846 122046220 -23543068 - THE1C LTR MaLR 0 375 2 239 256 22 22 chr10 122047302 122047392 -23541896 - MIR3 SINE MIR -8 200 111 365 246 23 121 chr10 122047399 122047614 -23541674 - MIR SINE MIR 0 262 69 245 133 89 0 chr10 122047973 122048018 -23541270 - MLT2D LTR ERVL 0 414 366 200 196 0 18 chr10 122048024 122048080 -23541208 + (TCTA)n Simple_repeat Simple_repeat 2 56 0 1229 237 123 39 chr10 122048130 122048543 -23540745 - MLT2B1 LTR ERVL -71 449 2 22706 163 22 22 chr10 122048544 122051663 -23537625 - ERVL-B1 LTR ERVL -7 5757 2640 2127 142 61 17 chr10 122051663 122052022 -23537266 - THE1C LTR MaLR 0 375 1 22706 163 22 22 chr10 122052022 122052795 -23536493 - ERVL-B1 LTR ERVL -3124 2640 1868 43791 32 21 1 chr10 122052797 122058819 -23530469 + L1PA2 LINE L1 13 6155 0 26 0 0 0 chr10 122058819 122058845 -23530443 + AT_rich Low_complexity Low_complexity 1 26 0 6895 206 50 21 chr10 122058845 122060295 -23528993 - ERVL-B1 LTR ERVL -3669 1824 362 1936 164 0 0 chr10 122060296 122060589 -23528699 - AluSx SINE Alu -19 293 1 985 141 0 0 chr10 122060589 122060724 -23528564 - AluSq/x SINE Alu -177 135 1 1027 286 32 12 chr10 122060724 122061067 -23528221 - ERVL-B1 LTR ERVL -5304 350 1 1704 227 99 47 chr10 122061067 122061107 -23528181 - MLT2B1 LTR ERVL 0 520 484 279 79 0 0 chr10 122061107 122061145 -23528143 + (TG)n Simple_repeat Simple_repeat 2 39 0 1704 227 99 47 chr10 122061145 122061597 -23527691 - MLT2B1 LTR ERVL -36 484 2 498 298 7 70 chr10 122061614 122061886 -23527402 - L2 LINE L2 0 3313 3059 1620 229 27 32 chr10 122062177 122062553 -23526735 + MLT1A2 LTR MaLR 1 374 0 403 282 40 48 chr10 122063382 122063506 -23525782 - L2 LINE L2 0 3272 3150 195 314 93 58 chr10 122064476 122064562 -23524726 + MIR3 SINE MIR 4 92 -116 1394 231 76 113 chr10 122064663 122065909 -23523379 - L1MC5 LINE L1 -48 7913 6714 306 258 54 11 chr10 122066112 122066205 -23523083 + L2 LINE L2 3176 3272 0 26 0 0 0 chr10 122066255 122066281 -23523007 + AT_rich Low_complexity Low_complexity 1 26 0 257 254 79 0 chr10 122066295 122066358 -23522930 + L2 LINE L2 3246 3313 0 489 320 69 87 chr10 122066359 122066937 -23522351 + L2 LINE L2 2704 3272 0 671 274 5 32 chr10 122067906 122068092 -23521196 + MIR SINE MIR 1 181 -81 594 0 0 0 chr10 122068105 122068171 -23521117 + (TA)n Simple_repeat Simple_repeat 1 66 0 529 309 37 62 chr10 122068745 122068988 -23520300 + MLT1K LTR MaLR 24 260 -328 489 231 161 54 chr10 122069095 122069337 -23519951 + MLT1K LTR MaLR 319 586 -2 2279 122 0 0 chr10 122070424 122070728 -23518560 - AluSg SINE Alu -6 304 1 238 372 33 8 chr10 122071072 122071193 -23518095 + L2 LINE L2 3148 3271 -1 335 179 71 24 chr10 122071276 122071360 -23517928 - L1MC4 LINE L1 -1339 6703 6616 2230 125 46 60 chr10 122071360 122071729 -23517559 + THE1B LTR MaLR 1 364 0 4217 89 23 5 chr10 122071729 122072301 -23516987 + THE1B-int LTR MaLR 1 582 -998 549 111 0 0 chr10 122072287 122072368 -23516920 + THE1B-int LTR MaLR 1500 1580 0 * 2188 127 59 34 chr10 122072368 122072722 -23516566 + THE1B LTR MaLR 1 363 -1 399 304 9 9 chr10 122073044 122073156 -23516132 + MER5A DNA MER1_type 8 119 -70 188 35 35 0 chr10 122073166 122073195 -23516093 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 654 308 105 67 chr10 122073491 122074396 -23514892 - L2 LINE L2 -433 2881 1943 292 278 43 0 chr10 122075016 122075118 -23514170 - MIR3 SINE MIR -24 184 74 648 291 136 36 chr10 122075218 122075579 -23513709 + MLT1K LTR MaLR 192 588 0 229 297 40 27 chr10 122076102 122076176 -23513112 + MIR SINE MIR 20 94 -114 21 0 0 0 chr10 122076193 122076214 -23513074 + AT_rich Low_complexity Low_complexity 1 21 0 311 115 77 0 chr10 122076217 122076269 -23513019 - Alu SINE Alu -7 294 239 2046 113 21 0 chr10 122076223 122076506 -23512782 - AluSx SINE Alu -23 289 1 312 307 18 30 chr10 122076609 122076775 -23512513 + MIR SINE MIR 50 213 -49 321 232 0 0 chr10 122077011 122077106 -23512182 + (TA)n Simple_repeat Simple_repeat 1 95 0 1424 152 65 56 chr10 122077140 122077298 -23511990 - Tigger2a DNA MER2_type -2347 361 206 12806 42 2 2 chr10 122077298 122079641 -23509647 + L1PA5 LINE L1 3811 6154 0 1424 152 65 56 chr10 122079641 122079838 -23509450 - Tigger2a DNA MER2_type -2502 206 3 279 0 0 0 chr10 122079838 122079869 -23509419 + (TG)n Simple_repeat Simple_repeat 2 32 0 227 61 0 0 chr10 122081331 122081364 -23507924 + MLT2A1 LTR ERVL 1 33 -411 2690 176 37 22 chr10 122081496 122082122 -23507166 + L1MB8 LINE L1 5542 6176 -2 443 293 137 29 chr10 122083323 122083528 -23505760 - MIR SINE MIR -34 228 2 700 213 146 43 chr10 122083596 122083967 -23505321 + L1ME3A LINE L1 4265 4673 -1473 772 181 0 0 chr10 122083991 122084118 -23505170 + FLAM_C SINE Alu 1 127 -16 893 283 93 40 chr10 122084118 122085057 -23504231 + L1ME3A LINE L1 4683 5681 -489 1067 197 82 10 chr10 122085072 122085377 -23503911 + L1ME3A LINE L1 5841 6167 -3 350 352 36 57 chr10 122085828 122086021 -23503267 - MIR3 SINE MIR -4 204 16 236 361 10 10 chr10 122087151 122087248 -23502040 - MIR SINE MIR -148 114 18 240 188 62 0 chr10 122088653 122088701 -23500587 - MIR SINE MIR -1 261 211 2089 153 13 21 chr10 122089240 122089618 -23499670 + THE1C LTR MaLR 1 375 0 9977 118 28 35 chr10 122089618 122091208 -23498080 + THE1C-int LTR MaLR 1 1580 0 2084 157 16 21 chr10 122091208 122091585 -23497703 + THE1C LTR MaLR 1 375 0 387 130 0 0 chr10 122092212 122092289 -23496999 + (TTAG)n Simple_repeat Simple_repeat 4 80 0 1799 166 3 7 chr10 122092290 122092579 -23496709 - AluSx SINE Alu -24 288 1 200 248 133 53 chr10 122093452 122093565 -23495723 + MIR SINE MIR 140 261 -1 488 345 98 11 chr10 122094418 122094786 -23494502 + MLT1K LTR MaLR 187 586 -2 6135 91 11 6 chr10 122095008 122096333 -23492955 + L1PA14 LINE L1 4826 6158 -3 292 367 199 0 chr10 122096691 122096947 -23492341 + L2 LINE L2 2655 2961 -353 1156 202 46 110 chr10 122096995 122097201 -23492087 - MER47B DNA MER2_type -1905 418 253 2132 87 0 45 chr10 122097201 122097489 -23491799 - AluY SINE Alu -21 290 16 1156 202 46 110 chr10 122097489 122097718 -23491570 - MER47B DNA MER2_type -2070 253 11 206 321 107 12 chr10 122097802 122097886 -23491402 + L2 LINE L2 3139 3230 -42 414 270 41 36 chr10 122097891 122098087 -23491201 + L2 LINE L2 1921 2117 -1197 4362 119 10 0 chr10 122098095 122098701 -23490587 - LTR9 LTR ERV1 0 612 1 488 303 50 70 chr10 122098764 122099064 -23490224 + L1ME4a LINE L1 5677 5970 -151 249 160 60 0 chr10 122099826 122099876 -23489412 + L2 LINE L2 1951 2003 -1311 364 271 186 7 chr10 122100035 122100175 -23489113 - MIR SINE MIR 0 262 98 910 301 71 23 chr10 122100786 122101225 -23488063 - LTR16C LTR ERVL 0 491 32 468 258 52 62 chr10 122101507 122101701 -23487587 + MIR SINE MIR 2 193 -69 337 0 0 102 chr10 122101712 122101771 -23487517 + (TCTA)n Simple_repeat Simple_repeat 2 54 0 23 0 0 0 chr10 122102062 122102085 -23487203 + AT_rich Low_complexity Low_complexity 1 23 0 278 284 181 0 chr10 122103427 122103543 -23485745 + HERV16 LTR ERVL 4776 4912 -852 343 339 0 12 chr10 122103851 122104022 -23485266 + HERV16 LTR ERVL 4731 4899 -97 362 214 102 53 chr10 122104300 122104506 -23484782 + LTR16B LTR ERVL 249 464 0 591 15 0 0 chr10 122105536 122105604 -23483684 + (TG)n Simple_repeat Simple_repeat 2 69 0 39749 57 5 3 chr10 122106006 122112141 -23477147 + L1PA5 LINE L1 1 6152 -2 1868 146 10 3 chr10 122112567 122112861 -23476427 + AluSg1 SINE Alu 1 296 -13 274 238 0 0 chr10 122113208 122113271 -23476017 - L2 LINE L2 -17 3255 3193 21 36 0 0 chr10 122113300 122113328 -23475960 + AT_rich Low_complexity Low_complexity 1 28 0 444 284 122 30 chr10 122113726 122113923 -23475365 + MIR SINE MIR 47 261 -1 353 256 135 33 chr10 122114189 122114404 -23474884 - L1M4 LINE L1 -2654 3492 3256 349 250 39 47 chr10 122115556 122115684 -23473604 + MIR SINE MIR 28 154 -108 596 303 6 6 chr10 122116682 122116857 -23472431 - MIR SINE MIR -49 213 39 252 337 43 0 chr10 122116898 122116990 -23472298 - L2 LINE L2 -35 3237 3142 2144 157 6 0 chr10 122117288 122117644 -23471644 + MER46B DNA MER2_type 1 233 -3 444 279 8 39 chr10 122118184 122118313 -23470975 - L2 LINE L2 -8 3305 3181 237 314 95 22 chr10 122118321 122118458 -23470830 - L2 LINE L2 -407 2907 2761 327 190 13 25 chr10 122119180 122119259 -23470029 - LTR36 LTR ERV1 0 611 534 1830 167 3 17 chr10 122119269 122119563 -23469725 + AluSx SINE Alu 9 298 -14 252 86 0 0 chr10 122119568 122119603 -23469685 + (GGGAA)n Simple_repeat Simple_repeat 3 37 0 388 93 0 0 chr10 122119703 122119757 -23469531 + MSTA LTR MaLR 375 428 0 471 273 38 60 chr10 122119762 122119945 -23469343 + L2 LINE L2 3134 3312 -1 240 281 24 37 chr10 122120718 122120800 -23468488 + MIR SINE MIR 176 256 -6 2231 102 76 15 chr10 122120939 122121282 -23468006 - THE1B LTR MaLR 0 364 1 4993 109 3 0 chr10 122121287 122122011 -23467277 - THE1B-int LTR MaLR -6 1574 849 3611 81 10 0 chr10 122122111 122122617 -23466671 - THE1B-int LTR MaLR -1069 511 1 2183 129 76 12 chr10 122122617 122122959 -23466329 - THE1B LTR MaLR 0 364 1 320 255 10 49 chr10 122123044 122123146 -23466142 - MIR SINE MIR -5 257 160 681 265 46 34 chr10 122124739 122124977 -23464311 - L2 LINE L2 -196 3076 2836 651 299 68 34 chr10 122125326 122125560 -23463728 - MIR SINE MIR -8 254 13 28 0 0 0 chr10 122125600 122125628 -23463660 + AT_rich Low_complexity Low_complexity 1 28 0 1703 156 48 38 chr10 122126527 122126841 -23462447 + Tigger3(Golem) DNA MER2_type 1 317 -2712 4902 112 76 6 chr10 122126850 122127639 -23461649 + Tigger3(Golem) DNA MER2_type 2181 3024 -5 22 0 0 0 chr10 122127807 122127829 -23461459 + AT_rich Low_complexity Low_complexity 1 22 0 1000 200 19 23 chr10 122128013 122128228 -23461060 - L1MC1 LINE L1 -6 6327 6114 3277 184 41 18 chr10 122128228 122128934 -23460354 + L1MC1 LINE L1 5572 6293 -40 2315 71 0 0 chr10 122128953 122129264 -23460024 + AluY SINE Alu 3 313 0 34 0 0 0 chr10 122130702 122130736 -23458552 + AT_rich Low_complexity Low_complexity 1 34 0 23 54 0 0 chr10 122131160 122131197 -23458091 + AT_rich Low_complexity Low_complexity 1 37 0 656 332 61 8 chr10 122131201 122131463 -23457825 + L1MDb LINE L1 9 284 -6125 2073 249 53 8 chr10 122131539 122132137 -23457151 + L1MDb LINE L1 663 1287 -5122 883 165 44 6 chr10 122132149 122132331 -23456957 + MLT1C LTR MaLR 9 197 -270 1099 164 0 0 chr10 122132395 122132560 -23456728 - AluSg/x SINE Alu -21 291 127 1318 266 77 20 chr10 122132564 122133202 -23456086 + L1MDb LINE L1 851 1524 -5063 249 152 22 0 chr10 122133247 122133293 -23455995 - L1MCa LINE L1 -6283 143 97 801 123 0 0 chr10 122133304 122133438 -23455850 - AluSp/q SINE Alu 0 312 179 819 160 38 4 chr10 122133463 122133614 -23455674 + L1MCa LINE L1 234 382 -5663 393 73 18 0 chr10 122133591 122133646 -23455642 + L1MCa LINE L1 1766 1821 -4743 * 454 284 87 26 chr10 122133678 122133942 -23455346 + L1MDb LINE L1 1391 1670 -4738 2557 210 27 21 chr10 122133951 122134036 -23455252 + L1MCa LINE L1 21 104 -6322 2120 123 0 10 chr10 122134036 122134363 -23454925 + AluSq SINE Alu 1 313 0 2557 210 27 21 chr10 122134363 122134835 -23454453 + L1MCa LINE L1 104 581 -5845 3235 77 40 5 chr10 122134835 122134877 -23454411 - MLT2A1 LTR ERVL 0 444 405 270 0 0 0 chr10 122134877 122134907 -23454381 + (TA)n Simple_repeat Simple_repeat 2 31 0 3235 77 40 5 chr10 122134907 122135293 -23453995 - MLT2A1 LTR ERVL -39 405 1 10275 74 2 13 chr10 122135294 122136638 -23452650 - HERVL-A1 LTR ERVL -1 5653 4325 8300 62 8 0 chr10 122136634 122137663 -23451625 - HERVL-A1 LTR ERVL -2427 3227 2191 * 4440 164 50 75 chr10 122137746 122138905 -23450383 + L1MCa LINE L1 570 1787 -4639 2617 39 0 10 chr10 122138905 122139214 -23450074 - AluY SINE Alu -5 306 1 4440 164 50 75 chr10 122139214 122139318 -23449970 + L1MCa LINE L1 1787 1892 -4534 7194 252 33 10 chr10 122139352 122141601 -23447687 + L1MCa LINE L1 2727 5027 -1399 903 124 15 0 chr10 122141603 122141740 -23447548 + L1PA15-16 LINE L1 3 141 -6708 1929 241 53 33 chr10 122141740 122142283 -23447005 + MLT2B3 LTR ERVL 1 554 0 11734 102 2 2 chr10 122142283 122143887 -23445401 + HERVL-B3 LTR ERVL 1 1604 -4050 536 294 30 50 chr10 122143897 122144159 -23445129 - L2 LINE L2 -1227 2087 1831 686 306 19 0 chr10 122145016 122145225 -23444063 - MIR SINE MIR -8 254 42 246 374 33 0 chr10 122145313 122145404 -23443884 + MIR SINE MIR 33 126 -82 185 59 59 0 chr10 122145749 122145783 -23443505 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 189 0 0 0 chr10 122145787 122145808 -23443480 + (GAAA)n Simple_repeat Simple_repeat 4 24 0 26 64 0 0 chr10 122146083 122146130 -23443158 + AT_rich Low_complexity Low_complexity 1 47 0 224 302 48 0 chr10 122146497 122146560 -23442728 - L2 LINE L2 -50 3222 3157 22 0 0 0 chr10 122146578 122146600 -23442688 + AT_rich Low_complexity Low_complexity 1 22 0 275 167 176 19 chr10 122146625 122146733 -23442555 - L1ME4a LINE L1 -71 6050 5926 878 185 16 70 chr10 122147208 122147649 -23441639 + MLT1A1 LTR MaLR 1 365 0 2300 68 13 36 chr10 122147704 122148013 -23441275 - AluSg SINE Alu -8 302 1 1189 280 144 37 chr10 122148345 122149083 -23440205 - L1MEd LINE L1 -1994 4135 3269 2215 112 3 0 chr10 122149083 122149386 -23439902 - AluSq SINE Alu -9 304 1 1189 280 144 37 chr10 122149386 122149611 -23439677 - L1MEd LINE L1 -2860 3269 3069 21 36 0 0 chr10 122149827 122149855 -23439433 + AT_rich Low_complexity Low_complexity 1 28 0 494 282 130 14 chr10 122150002 122150349 -23438939 - L1MEd LINE L1 -3530 2599 2213 290 284 0 24 chr10 122150433 122150560 -23438728 + T-rich Low_complexity Low_complexity 2 125 0 315 305 46 23 chr10 122150817 122150948 -23438340 - L1MEd LINE L1 -4641 1669 1536 540 273 46 110 chr10 122151100 122151817 -23437471 - L1MEd LINE L1 -4862 1257 623 2472 33 0 26 chr10 122151817 122152121 -23437167 - AluY SINE Alu -15 296 1 540 273 46 110 chr10 122152121 122152293 -23436995 - L1MEd LINE L1 -5496 623 442 236 245 36 65 chr10 122152578 122152717 -23436571 - L1MEd LINE L1 -5982 137 3 341 233 33 22 chr10 122152725 122152815 -23436473 + L2 LINE L2 3182 3272 0 759 178 0 2 chr10 122154188 122154329 -23434959 - L1PB1 LINE L1 -246 5905 5767 282 56 0 0 chr10 122154394 122154430 -23434858 + (CA)n Simple_repeat Simple_repeat 2 37 0 906 93 0 0 chr10 122154435 122154564 -23434724 - L1PB1 LINE L1 -376 5775 5647 1081 149 0 47 chr10 122154564 122154688 -23434600 + L1PB1 LINE L1 5947 6059 -92 2365 68 0 3 chr10 122154688 122154995 -23434293 - AluY SINE Alu -5 306 1 1081 149 0 47 chr10 122154995 122155084 -23434204 + L1PB1 LINE L1 6059 6151 0 615 297 70 70 chr10 122155157 122155484 -23433804 - MLT1J2 LTR MaLR -123 327 1 702 289 103 33 chr10 122155878 122156356 -23432932 + L1MC/D LINE L1 4625 5068 -1448 2787 10 0 0 chr10 122156356 122156659 -23432629 + AluY SINE Alu 1 303 -8 702 289 103 33 chr10 122156659 122157243 -23432045 + L1MC/D LINE L1 5068 5769 -747 8576 107 15 17 chr10 122157412 122158715 -23430573 - HSMAR2 DNA Mariner 0 1302 2 42 36 0 0 chr10 122158853 122158909 -23430379 + AT_rich Low_complexity Low_complexity 1 56 0 575 320 145 24 chr10 122158952 122159869 -23429419 + L1MC/D LINE L1 4649 5678 -757 234 324 14 0 chr10 122159884 122159955 -23429333 + GA-rich Low_complexity Low_complexity 3 74 0 22 0 0 0 chr10 122160009 122160031 -23429257 + AT_rich Low_complexity Low_complexity 1 22 0 374 193 44 35 chr10 122160123 122160237 -23429051 + L1M4 LINE L1 2664 2778 -3368 1285 227 117 29 chr10 122160242 122160696 -23428592 - LTR48B LTR ERV1 0 644 151 351 286 59 0 chr10 122160678 122160797 -23428491 - MER34 LTR ERV1 -416 126 1 * 1519 222 82 51 chr10 122160799 122160933 -23428355 + L1M4 LINE L1 2783 2911 -3235 2163 115 6 6 chr10 122160933 122161246 -23428042 + AluSq SINE Alu 1 313 0 1519 222 82 51 chr10 122161246 122161818 -23427470 + L1M4 LINE L1 2911 3511 -2635 2131 125 0 7 chr10 122164075 122164380 -23424908 - AluSx SINE Alu -9 303 1 1015 237 54 20 chr10 122164568 122164910 -23424378 - MSTD LTR MaLR -8 388 1 1150 148 5 11 chr10 122166267 122166456 -23422832 + AluJb SINE Alu 113 300 -12 386 288 89 31 chr10 122166474 122166731 -23422557 + L1ME4a LINE L1 5614 5885 -236 1518 189 121 31 chr10 122166800 122167255 -23422033 + LTR54B LTR ERV1 1 496 -2 348 295 21 0 chr10 122167882 122167977 -23421311 - MIR3 SINE MIR -14 194 98 2428 57 0 3 chr10 122168385 122168681 -23420607 - AluY SINE Alu -16 295 1 245 296 14 0 chr10 122168753 122168824 -23420464 - MIR SINE MIR -39 223 152 721 240 23 12 chr10 122168873 122169062 -23420226 - MER20 DNA MER1_type -50 169 1 289 269 86 20 chr10 122169219 122169318 -23419970 + MIR SINE MIR 39 135 -73 187 369 72 0 chr10 122169364 122169475 -23419813 + MIR SINE MIR 18 136 -126 200 264 19 19 chr10 122169736 122169789 -23419499 + L2 LINE L2 2748 2800 -514 295 307 84 33 chr10 122169888 122170103 -23419185 + L2 LINE L2 2844 3069 -203 291 250 111 41 chr10 122170642 122170814 -23418474 + MLT1K LTR MaLR 396 606 -9 1847 208 66 31 chr10 122170969 122171454 -23417834 - MLT1D LTR MaLR -2 503 2 273 284 63 79 chr10 122171468 122171595 -23417693 - MIR3 SINE MIR -1 207 83 248 320 39 10 chr10 122172734 122172837 -23416451 - MIR SINE MIR -73 189 84 295 229 165 28 chr10 122172837 122172946 -23416342 - MLT1H LTR MaLR -1 548 454 2465 57 0 10 chr10 122173362 122173661 -23415627 + AluY SINE Alu 5 300 -11 232 265 0 0 chr10 122174333 122174382 -23414906 - MIR3 SINE MIR -10 198 150 3801 31 0 0 chr10 122174876 122175322 -23413966 - L1PA5 LINE L1 -6 6148 5703 1729 20 0 0 chr10 122175322 122175517 -23413771 + L1PA5 LINE L1 5504 5698 -457 320 333 147 8 chr10 122175533 122175662 -23413626 + MIR3 SINE MIR 16 162 -46 550 330 60 15 chr10 122176282 122176549 -23412739 + L2 LINE L2 2808 3086 -227 1211 182 0 0 chr10 122176642 122176840 -23412448 - AluJo SINE Alu -28 284 87 476 188 8 70 chr10 122176841 122176969 -23412319 + L2 LINE L2 3133 3252 -61 402 230 129 65 chr10 122177614 122177831 -23411457 - MIR SINE MIR 0 262 32 431 278 80 21 chr10 122177929 122178116 -23411172 - L2 LINE L2 0 3313 3116 282 279 23 23 chr10 122178610 122178696 -23410592 - L2 LINE L2 0 3313 3228 192 102 61 0 chr10 122178737 122178786 -23410502 + GA-rich Low_complexity Low_complexity 1 52 0 386 243 106 60 chr10 122178852 122179070 -23410218 - MLT1J LTR MaLR 0 511 284 359 304 65 12 chr10 122179184 122179352 -23409936 + L1MCb LINE L1 3 179 -5866 6944 183 93 66 chr10 122179407 122181064 -23408224 - MER52A LTR ERV1 0 1755 55 332 264 182 77 chr10 122181111 122181463 -23407825 + L1M2 LINE L1 884 1272 -5577 3859 206 147 96 chr10 122181481 122182230 -23407058 + L1MCb LINE L1 419 1128 -5436 673 67 0 0 chr10 122182230 122182320 -23406968 + L1PB3 LINE L1 6065 6154 0 3859 206 147 96 chr10 122182320 122183647 -23405641 + L1MCb LINE L1 1128 2601 -3963 7207 174 56 13 chr10 122183670 122184403 -23404885 + L1PA15 LINE L1 3877 4577 -1588 2116 135 0 0 chr10 122184403 122184700 -23404588 + AluSg SINE Alu 1 297 -13 7207 174 56 13 chr10 122184700 122186214 -23403074 + L1PA15 LINE L1 4577 6163 -2 21 0 0 0 chr10 122186269 122186290 -23402998 + AT_rich Low_complexity Low_complexity 1 21 0 2032 164 0 0 chr10 122186345 122186650 -23402638 + AluSx SINE Alu 6 310 -2 22 0 0 0 chr10 122186650 122186672 -23402616 + AT_rich Low_complexity Low_complexity 1 22 0 5385 233 77 22 chr10 122186672 122188454 -23400834 + L1MCb LINE L1 2621 4501 -2063 323 206 15 0 chr10 122188458 122188526 -23400762 + L1MCb LINE L1 4946 5014 -1550 241 329 53 0 chr10 122189485 122189561 -23399727 + MIR SINE MIR 106 185 -77 2523 186 42 13 chr10 122190555 122191097 -23398191 + MER89 LTR ERV1 2 559 0 210 71 0 0 chr10 122191456 122191484 -23397804 + (CAT)n Simple_repeat Simple_repeat 2 29 0 237 33 0 0 chr10 122191502 122191532 -23397756 + (CA)n Simple_repeat Simple_repeat 1 30 0 435 333 18 6 chr10 122192870 122193087 -23396201 + MIR SINE MIR 8 262 0 251 316 68 43 chr10 122193301 122193418 -23395870 + MIR SINE MIR 18 137 -71 327 292 106 19 chr10 122193447 122193599 -23395689 - MIR SINE MIR -25 237 72 448 305 58 28 chr10 122193599 122193832 -23395456 + MIR SINE MIR 3 246 -16 608 267 43 35 chr10 122194140 122194372 -23394916 - L2 LINE L2 -4 3309 3076 325 197 0 0 chr10 122195096 122195162 -23394126 + L1ME4a LINE L1 5980 6045 -76 589 190 12 129 chr10 122195349 122195512 -23393776 + MER63 DNA MER1_type 1 770 -292 211 328 205 16 chr10 122196290 122196412 -23392876 - MIR SINE MIR -77 185 41 794 224 37 37 chr10 122196511 122196725 -23392563 + MLT1J2 LTR MaLR 1 214 -236 220 329 44 51 chr10 122197544 122197702 -23391586 - MIR SINE MIR -33 229 73 855 203 0 26 chr10 122199891 122200083 -23389205 + AluJb SINE Alu 1 187 -125 1911 193 133 11 chr10 122200475 122200925 -23388363 + MLT1D LTR MaLR 1 505 0 411 217 19 9 chr10 122201386 122201492 -23387796 + LTR33A LTR ERVL 417 523 0 663 249 58 29 chr10 122201838 122202043 -23387245 - MIR SINE MIR -45 217 7 453 237 244 0 chr10 122202127 122202283 -23387005 - MIR SINE MIR 0 262 69 485 176 0 7 chr10 122202351 122202499 -23386789 + (TA)n Simple_repeat Simple_repeat 1 147 0 548 309 25 40 chr10 122202606 122202807 -23386481 - MIR SINE MIR -49 213 16 1639 231 13 24 chr10 122202809 122203185 -23386103 - MLT1A2 LTR MaLR 0 374 3 203 318 71 32 chr10 122203210 122203336 -23385952 - L2 LINE L2 -640 2674 2544 368 306 59 59 chr10 122203517 122203586 -23385702 + L1ME3A LINE L1 5425 5493 -677 2284 101 3 0 chr10 122203586 122203883 -23385405 + AluSx SINE Alu 7 304 -8 368 306 59 59 chr10 122203883 122204270 -23385018 + L1ME3A LINE L1 5492 5881 -289 21 36 0 0 chr10 122204577 122204605 -23384683 + AT_rich Low_complexity Low_complexity 1 28 0 237 225 67 56 chr10 122204624 122204713 -23384575 + MIR SINE MIR 138 227 -35 198 306 0 14 chr10 122204811 122204883 -23384405 - MIR SINE MIR -56 206 136 184 291 23 70 chr10 122205138 122205224 -23384064 + MIR SINE MIR 95 176 -86 573 269 163 37 chr10 122207085 122207435 -23381853 - MLT1H LTR MaLR -49 500 107 1787 144 83 37 chr10 122207439 122207787 -23381501 + THE1B LTR MaLR 1 364 0 434 286 103 46 chr10 122208288 122208617 -23380671 - L1ME LINE L1 -476 5645 5298 290 304 36 24 chr10 122208847 122209100 -23380188 - L1ME LINE L1 -1089 5057 4802 672 259 13 6 chr10 122209501 122209659 -23379629 + MIR SINE MIR 3 161 -101 510 321 84 22 chr10 122209744 122210018 -23379270 + MLT1J1 LTR MaLR 63 353 -93 2306 78 3 0 chr10 122210031 122210315 -23378973 - AluSg SINE Alu -25 285 1 477 323 71 19 chr10 122210513 122211178 -23378110 - L1ME LINE L1 -1832 4314 3616 921 189 5 0 chr10 122212026 122212216 -23377072 - L1MA4 LINE L1 -15 6285 6095 212 371 84 7 chr10 122212349 122212492 -23376796 - MIR SINE MIR -47 215 62 285 130 0 54 chr10 122214958 122215050 -23374238 + (TTTA)n Simple_repeat Simple_repeat 3 89 0 426 264 118 14 chr10 122215424 122215568 -23373720 - Charlie8 DNA MER1_type -2152 265 107 912 132 16 28 chr10 122216267 122216449 -23372839 - L1MA7 LINE L1 -1 6290 6111 351 146 9 118 chr10 122216451 122216561 -23372727 + L1MA7 LINE L1 5937 6034 -257 382 145 118 0 chr10 122216737 122216813 -23372475 + L1MA7 LINE L1 6042 6126 -165 1815 207 29 107 chr10 122216817 122217545 -23371743 - L1MC5 LINE L1 -626 7335 6665 242 250 0 0 chr10 122217547 122217595 -23371693 + polypyrimidine Low_complexity Low_complexity 1 48 0 327 208 74 34 chr10 122218205 122218250 -23371038 - L1MA10 LINE L1 -9 6325 6281 4128 258 52 28 chr10 122218250 122220653 -23368635 - L1ME1 LINE L1 -48 6118 3628 420 304 154 18 chr10 122220832 122221052 -23368236 + MIR SINE MIR 3 252 -10 206 304 14 14 chr10 122222292 122222361 -23366927 - L2 LINE L2 -1 3271 3203 1287 305 71 13 chr10 122223918 122224384 -23364904 + L2 LINE L2 2485 2977 -337 953 246 35 79 chr10 122224428 122224834 -23364454 + L2 LINE L2 2847 3234 -79 193 233 293 8 chr10 122224909 122225042 -23364246 - MIR SINE MIR -89 173 3 285 299 165 12 chr10 122225977 122226141 -23363147 + L2 LINE L2 2570 2758 -556 270 282 64 27 chr10 122226148 122226276 -23363012 - MER5B DNA MER1_type 0 178 63 199 313 61 54 chr10 122226293 122226440 -23362848 + L2 LINE L2 2766 2913 -401 228 95 0 48 chr10 122226739 122226781 -23362507 + MIR SINE MIR 219 258 -4 236 353 22 15 chr10 122226972 122227108 -23362180 - MER5A DNA MER1_type -37 152 16 786 199 21 5 chr10 122228402 122228588 -23360700 - L1MA7 LINE L1 -1 6290 6102 601 284 27 11 chr10 122228793 122228976 -23360312 + MIR SINE MIR 67 252 -10 268 267 47 12 chr10 122228977 122229063 -23360225 - L2 LINE L2 -31 3241 3153 1795 183 11 42 chr10 122229385 122229762 -23359526 + MLT1A1 LTR MaLR 1 365 0 223 286 18 0 chr10 122229763 122229819 -23359469 - L2 LINE L2 -6 3307 3251 188 250 150 0 chr10 122229951 122230011 -23359277 + MIR SINE MIR 85 153 -109 272 325 16 0 chr10 122230123 122230249 -23359039 + (ATG)n Simple_repeat Simple_repeat 2 129 0 262 246 174 0 chr10 122230260 122230329 -23358959 - L2 LINE L2 -4 3309 3229 201 305 85 68 chr10 122231178 122231296 -23357992 + L2 LINE L2 3151 3270 -2 243 285 177 27 chr10 122231379 122231565 -23357723 + MIR SINE MIR 49 262 0 199 360 64 8 chr10 122231733 122231858 -23357430 - L2 LINE L2 -13 3300 3169 217 234 16 0 chr10 122231860 122231924 -23357364 + (CA)n Simple_repeat Simple_repeat 1 65 0 523 265 70 58 chr10 122232074 122232450 -23356838 + L1M4 LINE L1 2798 3186 -2960 1979 137 27 0 chr10 122232450 122232743 -23356545 + AluJo SINE Alu 1 301 -11 523 265 70 58 chr10 122232743 122232782 -23356506 + L1M4 LINE L1 3186 3223 -2923 438 345 42 24 chr10 122233683 122234063 -23355225 + MER110-int LTR ERV1 3262 3648 -3153 276 339 67 12 chr10 122234271 122234525 -23354763 + MER110-int LTR ERV1 2136 2403 -2244 3035 237 32 14 chr10 122234692 122235562 -23353726 - L1M4 LINE L1 -1260 4886 4001 641 347 45 13 chr10 122236496 122236810 -23352478 + L3 LINE CR1 1250 1573 -4 480 314 0 58 chr10 122236847 122237019 -23352269 + MIR3 SINE MIR 38 199 -9 3491 50 5 2 chr10 122237059 122237500 -23351788 + L1PA5 LINE L1 5710 6151 -3 335 295 121 7 chr10 122237599 122237748 -23351540 - MER63A DNA MER1_type 0 210 45 496 259 8 8 chr10 122237845 122237976 -23351312 + Charlie2 DNA MER1_type 194 324 -2458 1772 228 90 43 chr10 122237982 122238825 -23350463 + Charlie2 DNA MER1_type 1859 2741 -121 182 311 144 0 chr10 122240549 122240639 -23348649 - L2 LINE L2 0 3272 3170 238 241 125 45 chr10 122240648 122240760 -23348528 + MLT1H LTR MaLR 35 155 -394 501 189 28 87 chr10 122240890 122241096 -23348192 + MLT1H LTR MaLR 332 545 -4 471 275 176 23 chr10 122241101 122241363 -23347925 - L2 LINE L2 -58 3255 2954 207 220 0 0 chr10 122242317 122242367 -23346921 + GA-rich Low_complexity Low_complexity 4 53 0 488 287 16 8 chr10 122244045 122244174 -23345114 - MIR3 SINE MIR -68 140 11 306 300 71 59 chr10 122244330 122244506 -23344782 + MIR SINE MIR 2 178 -78 450 0 0 0 chr10 122244970 122245020 -23344268 + (CA)n Simple_repeat Simple_repeat 2 51 0 1783 330 90 41 chr10 122245111 122246547 -23342741 + L2 LINE L2 1721 3271 -1 410 279 59 15 chr10 122247367 122247503 -23341785 + MIR SINE MIR 73 214 -48 302 280 144 0 chr10 122248429 122248561 -23340727 + MIR3 SINE MIR 19 169 -39 206 333 19 0 chr10 122248555 122248609 -23340679 - L3b LINE CR1 -7 1576 1522 * 276 353 67 17 chr10 122248711 122248830 -23340458 + MIR SINE MIR 25 149 -59 313 210 28 148 chr10 122250064 122250240 -23339048 + MLT1H LTR MaLR 209 363 -186 294 29 0 0 chr10 122250875 122250910 -23338378 + (A)n Simple_repeat Simple_repeat 1 35 0 184 206 41 96 chr10 122252104 122252177 -23337111 + MIR SINE MIR 65 133 -75 228 170 0 0 chr10 122253342 122253395 -23335893 + (CA)n Simple_repeat Simple_repeat 1 53 0 251 27 0 0 chr10 122253715 122253752 -23335536 - L1MA3 LINE L1 0 6305 6269 300 305 0 0 chr10 122253758 122253840 -23335448 + L1MC4 LINE L1 6614 6695 -1347 198 0 0 0 chr10 122253840 122253862 -23335426 + (TG)n Simple_repeat Simple_repeat 2 23 0 1384 87 0 19 chr10 122253862 122254068 -23335220 - L1MA1 LINE L1 -26 6276 6075 330 242 45 68 chr10 122254216 122254348 -23334940 + L1ME4a LINE L1 5987 6115 -6 290 247 25 0 chr10 122255148 122255229 -23334059 + GA-rich Low_complexity Low_complexity 3 85 0 836 238 117 3 chr10 122256180 122256470 -23332818 + L1MD2 LINE L1 5642 5964 -395 3775 246 81 27 chr10 122256520 122257891 -23331397 - L1M4 LINE L1 -1607 4539 3076 1885 159 3 0 chr10 122257891 122258203 -23331085 - AluSx SINE Alu 0 313 1 3775 246 81 27 chr10 122258203 122258344 -23330944 - L1M4 LINE L1 -3070 3076 2944 263 295 16 16 chr10 122258341 122258470 -23330818 - L1ME LINE L1 -5435 635 507 * 13631 32 6 1 chr10 122258890 122261283 -23328005 + L1PA3 LINE L1 3758 6154 -1 332 268 45 27 chr10 122261822 122261934 -23327354 + L2 LINE L2 3159 3272 0 315 0 0 0 chr10 122263040 122263075 -23326213 + (T)n Simple_repeat Simple_repeat 1 35 0 23 33 0 0 chr10 122263078 122263108 -23326180 + AT_rich Low_complexity Low_complexity 1 30 0 6162 30 3 6 chr10 122263108 122263908 -23325380 - L1PA3 LINE L1 0 6155 5380 6118 19 0 0 chr10 122263889 122264646 -23324642 + L1PA3 LINE L1 4637 5393 -753 * 754 279 51 13 chr10 122264812 122265049 -23324239 + MIR SINE MIR 7 252 -10 596 289 126 31 chr10 122265471 122265777 -23323511 + L2 LINE L2 2924 3270 -43 2283 103 47 36 chr10 122265777 122266137 -23323151 + THE1B LTR MaLR 1 364 0 596 289 126 31 chr10 122266137 122266186 -23323102 + L2 LINE L2 3270 3313 0 206 323 89 48 chr10 122266324 122266448 -23322840 + L2 LINE L2 3143 3271 -1 240 284 0 0 chr10 122267486 122267560 -23321728 + (TA)n Simple_repeat Simple_repeat 2 75 0 291 277 24 0 chr10 122267860 122267943 -23321345 + (TA)n Simple_repeat Simple_repeat 2 86 0 804 267 97 46 chr10 122268190 122268484 -23320804 - LTR33 LTR ERVL -18 503 178 846 171 27 16 chr10 122268484 122268671 -23320617 - MER53 DNA DNA 0 189 1 804 267 97 46 chr10 122268671 122268811 -23320477 - LTR33 LTR ERVL -343 178 47 258 269 229 10 chr10 122269236 122269537 -23319751 + L1MC4a LINE L1 5901 6267 -1541 975 179 17 123 chr10 122269617 122269968 -23319320 + L1MD2 LINE L1 6045 6358 -1 1688 91 0 0 chr10 122269973 122270182 -23319106 + AluSc SINE Alu 1 209 -100 565 291 45 5 chr10 122270184 122270407 -23318881 + L1MC4 LINE L1 7159 7390 -652 311 310 103 26 chr10 122270500 122270732 -23318556 - L2 LINE L2 -215 3057 2808 446 230 138 13 chr10 122272349 122272501 -23316787 + MIR3 SINE MIR 15 185 -23 28 48 0 0 chr10 122273328 122273370 -23315918 + AT_rich Low_complexity Low_complexity 1 42 0 238 305 42 32 chr10 122273586 122273681 -23315607 + MLT1K LTR MaLR 61 156 -432 905 236 0 0 chr10 122273684 122273866 -23315422 - AluJb SINE Alu -9 303 122 798 136 23 15 chr10 122273895 122274075 -23315213 - FLAM_C SINE Alu 0 181 1 506 258 101 80 chr10 122274108 122274143 -23315145 + MLT1K LTR MaLR 189 222 -366 2182 134 0 0 chr10 122274143 122274450 -23314838 + AluSx SINE Alu 1 307 -5 506 258 101 80 chr10 122274450 122274802 -23314486 + MLT1K LTR MaLR 222 584 -4 2854 245 47 16 chr10 122274850 122275993 -23313295 - L1ME1 LINE L1 -4 6231 5056 2201 258 31 28 chr10 122275999 122276711 -23312577 - L1ME1 LINE L1 -5648 748 35 189 285 22 161 chr10 122276924 122277061 -23312227 - L2 LINE L2 -4 3309 3192 777 250 25 25 chr10 122277078 122277282 -23312006 - MIR SINE MIR -49 213 10 800 284 72 8 chr10 122277346 122277610 -23311678 - L2 LINE L2 -185 3128 2848 211 296 10 51 chr10 122277608 122277706 -23311582 + MIR SINE MIR 169 262 0 * 212 330 88 11 chr10 122277749 122277840 -23311448 - L2 LINE L2 -175 3097 3000 264 266 126 63 chr10 122278591 122278734 -23310554 + MER5A DNA MER1_type 10 161 -28 352 226 43 108 chr10 122278833 122279019 -23310269 - MER5B DNA MER1_type -1 177 4 678 319 41 32 chr10 122279032 122279271 -23310017 - MER102b DNA MER1_type -1087 341 97 2119 137 0 0 chr10 122279271 122279570 -23309718 + AluSx SINE Alu 1 299 -13 678 319 41 32 chr10 122279570 122279668 -23309620 - MER102b DNA MER1_type -1331 97 1 2261 109 53 25 chr10 122280156 122280515 -23308773 - L1PB1 LINE L1 0 6151 5783 43771 32 22 1 chr10 122280527 122286550 -23302738 + L1PA2 LINE L1 1 6151 -4 460 93 0 13 chr10 122287043 122287118 -23302170 - L1PB1 LINE L1 -799 5352 5279 195 284 40 27 chr10 122287119 122287193 -23302095 - MER5A DNA MER1_type -114 75 1 832 176 139 9 chr10 122287944 122288160 -23301128 + MIR SINE MIR 12 255 -7 746 236 121 94 chr10 122289272 122289709 -23299579 - MLT1J2 LTR MaLR 0 450 2 199 383 32 0 chr10 122290186 122290280 -23299008 - MIR SINE MIR -10 252 156 348 296 184 10 chr10 122290283 122290489 -23298799 - MIR SINE MIR -1 261 20 5037 202 39 11 chr10 122291245 122292291 -23296997 + Tigger6a DNA MER2_type 1 1076 -7 200 320 180 0 chr10 122292817 122292917 -23296371 - MIR SINE MIR -139 123 6 501 277 0 0 chr10 122293139 122293240 -23296048 - MER5A DNA MER1_type 0 189 89 243 61 0 0 chr10 122293298 122293331 -23295957 + (A)n Simple_repeat Simple_repeat 1 33 0 500 188 0 0 chr10 122294301 122294381 -23294907 - MER5A DNA MER1_type -109 80 1 1019 225 22 22 chr10 122294895 122295126 -23294162 - MIR SINE MIR -22 240 10 201 289 21 72 chr10 122295183 122295280 -23294008 - MIR SINE MIR -56 206 115 404 339 107 40 chr10 122295958 122296406 -23292882 - MLT1K LTR MaLR -6 582 105 338 296 143 23 chr10 122296541 122296757 -23292531 - MIR SINE MIR -1 261 20 1170 130 0 0 chr10 122296849 122297011 -23292277 + AluSg/x SINE Alu 149 310 -2 402 310 94 6 chr10 122298197 122298368 -23290920 + MIR SINE MIR 20 205 -57 2242 189 17 0 chr10 122298937 122299296 -23289992 + MLT1A1 LTR MaLR 1 365 0 432 299 26 85 chr10 122299449 122299720 -23289568 + MLT1K LTR MaLR 334 588 0 328 234 0 0 chr10 122300572 122300636 -23288652 - MIR SINE MIR -113 149 86 295 242 0 0 chr10 122300856 122300918 -23288370 - MER5C DNA MER1_type -262 62 1 * 375 233 10 48 chr10 122300918 122301017 -23288271 - MIR SINE MIR -167 95 1 240 283 19 0 chr10 122301676 122301729 -23287559 - L2 LINE L2 -14 3258 3205 834 271 36 5 chr10 122301926 122302147 -23287141 - MIR SINE MIR -18 244 17 421 263 131 19 chr10 122302470 122302526 -23286762 - MER5B DNA MER1_type 0 178 130 2357 115 133 18 chr10 122302526 122302910 -23286378 - MSTA LTR MaLR 0 428 1 421 263 131 19 chr10 122302910 122303013 -23286275 - MER5B DNA MER1_type -48 130 1 364 313 40 20 chr10 122304081 122304231 -23285057 + MIR SINE MIR 100 252 -10 267 303 49 78 chr10 122304397 122304539 -23284749 + L2 LINE L2 3134 3271 -1 808 239 60 24 chr10 122304890 122305226 -23284062 - LTR35 LTR ERV1 0 677 338 226 195 61 24 chr10 122305909 122305991 -23283297 - L1ME4a LINE L1 -35 6086 6002 202 56 56 0 chr10 122306001 122306037 -23283251 + (CA)n Simple_repeat Simple_repeat 2 39 0 307 300 11 0 chr10 122306280 122306370 -23282918 - L1ME LINE L1 -488 5633 5543 569 92 25 25 chr10 122306640 122306759 -23282529 + Tigger3(Golem) DNA MER2_type 2335 2453 -576 2457 84 0 0 chr10 122307000 122307309 -23281979 - AluY SINE Alu -2 309 1 354 286 59 0 chr10 122307367 122307486 -23281802 - MER5A DNA MER1_type -63 126 1 491 279 8 0 chr10 122307709 122307831 -23281457 + MIR SINE MIR 123 245 -17 243 255 198 7 chr10 122308067 122308158 -23281130 - MIR3 SINE MIR -49 159 50 27 29 0 0 chr10 122308445 122308479 -23280809 + AT_rich Low_complexity Low_complexity 1 34 0 376 255 120 31 chr10 122308484 122308676 -23280612 - L1MC4a LINE L1 -1876 5932 5724 23 54 0 0 chr10 122309914 122309951 -23279337 + AT_rich Low_complexity Low_complexity 1 37 0 4479 174 46 2 chr10 122311107 122311956 -23277332 + L1MC3 LINE L1 6175 7060 -725 * 5869 102 27 1 chr10 122311930 122312769 -23276519 + L1PA11 LINE L1 5314 6174 0 325 177 0 73 chr10 122312747 122312843 -23276445 + L1MC3 LINE L1 7022 7110 -675 * 255 311 0 0 chr10 122312846 122312920 -23276368 + MLT1F1 LTR MaLR 52 125 -442 1858 190 54 3 chr10 122312935 122313304 -23275984 + L1MC3 LINE L1 7202 7589 -196 1043 97 119 0 chr10 122313309 122313485 -23275803 + L1MC2 LINE L1 6137 6333 -11 693 263 93 13 chr10 122313581 122313817 -23275471 - MLT1I LTR MaLR -138 271 17 1563 217 56 54 chr10 122314722 122315205 -23274083 + MLT1D LTR MaLR 3 486 -19 446 317 19 19 chr10 122315767 122315928 -23273360 - MIR SINE MIR -54 208 48 225 119 95 0 chr10 122317765 122317807 -23271481 + L2 LINE L2 3263 3308 -5 198 288 34 0 chr10 122317987 122318046 -23271242 - L2 LINE L2 -9 3304 3244 551 259 57 25 chr10 122318092 122318250 -23271038 - MIR SINE MIR -87 175 13 2210 135 44 97 chr10 122319129 122319581 -23269707 + MSTA LTR MaLR 1 428 0 414 219 15 95 chr10 122319704 122319841 -23269447 + MER94 DNA DNA 1 126 -8 334 243 0 14 chr10 122320602 122320676 -23268612 - MIR SINE MIR -3 259 187 391 169 0 0 chr10 122321240 122321305 -23267983 - THE1C LTR MaLR -156 219 155 9987 114 22 64 chr10 122321320 122322969 -23266319 - THE1C-int LTR MaLR 0 1580 1 2375 139 50 8 chr10 122322969 122323329 -23265959 - THE1C LTR MaLR 0 375 1 217 234 0 65 chr10 122323483 122323578 -23265710 + A-rich Low_complexity Low_complexity 6 95 -10 2391 81 0 0 chr10 122323578 122323875 -23265413 - AluY SINE Alu -14 297 1 217 234 0 65 chr10 122323875 122323886 -23265402 + A-rich Low_complexity Low_complexity 95 105 0 2384 205 128 2 chr10 122324101 122324556 -23264732 + MLT2B3 LTR ERVL 1 524 -30 249 108 0 0 chr10 122324556 122324593 -23264695 + (TCTA)n Simple_repeat Simple_repeat 2 38 0 2384 205 128 2 chr10 122324593 122324629 -23264659 + MLT2B3 LTR ERVL 524 554 0 2349 201 17 5 chr10 122324635 122325054 -23264234 + MSTB LTR MaLR 3 426 0 5056 176 40 33 chr10 122325282 122326318 -23262970 + L1MC2 LINE L1 5216 6287 -57 2343 97 0 3 chr10 122326318 122326628 -23262660 - AluSp SINE Alu -4 309 1 5056 176 40 33 chr10 122326628 122326686 -23262602 + L1MC2 LINE L1 6287 6343 -1 693 318 78 50 chr10 122326726 122327494 -23261794 + L1M4 LINE L1 4156 4945 -1201 364 200 20 0 chr10 122327499 122327599 -23261689 + (TA)n Simple_repeat Simple_repeat 1 102 0 1371 184 93 3 chr10 122327611 122327921 -23261367 + Tigger3(Golem) DNA MER2_type 12 349 -2680 * 1537 121 15 44 chr10 122327909 122328182 -23261106 + Tigger3(Golem) DNA MER2_type 2460 2724 -305 198 277 0 46 chr10 122328315 122328380 -23260908 - L2 LINE L2 -8 3305 3244 22 0 0 0 chr10 122328479 122328501 -23260787 + AT_rich Low_complexity Low_complexity 1 22 0 317 215 49 0 chr10 122328523 122328667 -23260621 + (TA)n Simple_repeat Simple_repeat 1 151 0 3071 163 2 31 chr10 122329607 122330160 -23259128 + MER52-int LTR ERV1 4045 4581 -2510 627 237 15 0 chr10 122330263 122330398 -23258890 + MLT1F1 LTR MaLR 19 155 -412 * 2434 172 65 13 chr10 122330380 122331359 -23257929 + Tigger6a DNA MER2_type 16 1083 0 418 316 55 52 chr10 122331361 122331633 -23257655 - L1ME LINE L1 -5467 603 331 321 306 94 6 chr10 122332049 122332219 -23257069 - MIR SINE MIR -3 259 75 879 94 8 0 chr10 122332371 122332488 -23256800 - THE1B LTR MaLR 0 364 247 229 374 11 0 chr10 122332489 122332580 -23256708 + MIR3 SINE MIR 102 193 -15 266 231 0 0 chr10 122332918 122332970 -23256318 + Charlie1 DNA MER1_type 3 54 -2707 448 297 138 0 chr10 122333177 122333315 -23255973 + MER5A DNA MER1_type 10 166 -23 323 294 88 62 chr10 122333434 122333628 -23255660 - MIR SINE MIR -40 222 24 460 318 41 32 chr10 122333955 122334175 -23255113 + MIR SINE MIR 40 261 -1 2669 101 31 6 chr10 122334383 122334738 -23254550 + THE1B LTR MaLR 1 364 0 379 247 21 10 chr10 122335089 122335186 -23254102 - MER5A DNA MER1_type -1 188 91 205 245 71 41 chr10 122335431 122335539 -23253749 - MIR SINE MIR -63 145 36 23 0 0 0 chr10 122335650 122335673 -23253615 + AT_rich Low_complexity Low_complexity 1 23 0 5036 170 10 12 chr10 122335786 122336588 -23252700 - MER52-int LTR ERV1 -1764 5327 4528 493 266 70 86 chr10 122336694 122337154 -23252134 - L1M4 LINE L1 -4647 1997 1445 2315 86 3 7 chr10 122337154 122337455 -23251833 - AluSq SINE Alu -2 311 12 462 118 15 0 chr10 122339091 122339159 -23250129 + MSTA LTR MaLR 360 428 0 1755 102 16 0 chr10 122339159 122339413 -23249875 + MSTA-int LTR MaLR 1 258 -1393 4440 119 49 44 chr10 122339428 122340244 -23249044 + L1M4c LINE L1 1394 2213 -4171 352 143 18 0 chr10 122340248 122340304 -23248984 - Tigger7 DNA MER2_type -1 2486 2430 209 220 37 83 chr10 122340567 122340676 -23248612 + MER5A DNA MER1_type 18 121 -68 830 171 34 28 chr10 122342586 122342762 -23246526 - AluJb SINE Alu -16 296 120 5850 112 4 7 chr10 122342873 122343688 -23245600 + THE1C-int LTR MaLR 769 1580 0 2364 122 24 27 chr10 122343688 122344064 -23245224 + THE1C LTR MaLR 1 375 0 180 158 0 0 chr10 122344727 122344765 -23244523 + A-rich Low_complexity Low_complexity 1 38 0 264 342 111 0 chr10 122344767 122344884 -23244404 + MER5B DNA MER1_type 48 177 -1 747 210 45 34 chr10 122344909 122345085 -23244203 - MER5B DNA MER1_type 0 178 1 277 361 142 10 chr10 122345725 122345930 -23243358 + MIR SINE MIR 21 252 -10 420 337 98 36 chr10 122346775 122347276 -23242012 + L2 LINE L2 1943 2474 -840 204 376 53 15 chr10 122347418 122347551 -23241737 - L2 LINE L2 0 3313 3176 2293 107 3 3 chr10 122347638 122347946 -23241342 + AluSp SINE Alu 1 308 -5 481 268 42 75 chr10 122348047 122348260 -23241028 - MIR SINE MIR -10 252 47 1120 182 78 54 chr10 122348363 122348659 -23240629 + MER33 DNA MER1_type 22 324 0 343 307 113 20 chr10 122349327 122349477 -23239811 + MIR SINE MIR 26 189 -73 3344 159 21 76 chr10 122349498 122350223 -23239065 - LTR8 LTR ERV1 0 691 7 2286 132 0 46 chr10 122350224 122350596 -23238692 + THE1A LTR MaLR 1 355 0 8451 165 51 54 chr10 122350598 122352252 -23237036 + MST-int LTR MaLR 3 1651 0 2391 105 25 47 chr10 122352254 122352615 -23236673 + THE1A LTR MaLR 3 355 0 186 318 0 0 chr10 122352628 122352672 -23236616 + L2 LINE L2 3211 3254 -18 504 286 97 0 chr10 122354566 122354741 -23234547 + MIR SINE MIR 15 206 -56 373 333 73 37 chr10 122356074 122356347 -23232941 - LTR16C LTR ERVL -120 371 89 352 325 61 38 chr10 122356623 122356827 -23232461 - MIR SINE MIR -6 256 50 441 273 50 8 chr10 122357102 122357223 -23232065 + L2 LINE L2 3147 3272 0 1234 184 43 96 chr10 122358231 122358649 -23230639 - LTR37A LTR ERV1 0 426 31 192 281 48 55 chr10 122359336 122359482 -23229806 - L2 LINE L2 -168 3104 2960 303 71 0 0 chr10 122361326 122361368 -23227920 + (TG)n Simple_repeat Simple_repeat 2 43 0 264 218 18 0 chr10 122361675 122361730 -23227558 - MIR3 SINE MIR -25 183 128 729 297 115 25 chr10 122361741 122362176 -23227112 - MLT1K LTR MaLR 0 588 115 288 336 99 38 chr10 122363569 122363704 -23225584 - MIR SINE MIR -35 227 73 1957 148 10 0 chr10 122363704 122364001 -23225287 + AluSx SINE Alu 1 300 -12 288 336 99 38 chr10 122364001 122364076 -23225212 - MIR SINE MIR -189 73 4 560 282 94 14 chr10 122364276 122364489 -23224799 - MIR SINE MIR -12 250 21 201 39 0 0 chr10 122365091 122365117 -23224171 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 243 288 82 0 chr10 122365551 122365624 -23223664 - L2 LINE L2 -9 3263 3185 323 364 169 29 chr10 122365743 122366558 -23222730 - L2 LINE L2 -337 2977 2049 1603 155 28 161 chr10 122366878 122367375 -23221913 - MSTB1 LTR MaLR 0 432 2 228 100 0 0 chr10 122367720 122367760 -23221528 + (CAGA)n Simple_repeat Simple_repeat 2 41 0 554 201 271 0 chr10 122368937 122369081 -23220207 - MER5A DNA MER1_type 0 189 7 184 304 37 58 chr10 122369123 122369314 -23219974 + MIR SINE MIR 28 214 -48 542 269 59 59 chr10 122369536 122369792 -23219496 - MIR SINE MIR -1 261 6 269 302 13 16 chr10 122370150 122370251 -23219037 + MIR SINE MIR 16 118 -90 586 224 128 56 chr10 122370727 122370923 -23218365 - MER63A DNA MER1_type 0 210 1 184 206 0 0 chr10 122372291 122372325 -23216963 + MER5B DNA MER1_type 87 120 -58 1749 136 66 7 chr10 122372377 122372410 -23216878 - MLT2C2 LTR ERVL -2 462 432 405 109 0 0 chr10 122372410 122372474 -23216814 + (TCCA)n Simple_repeat Simple_repeat 3 66 0 1749 136 66 7 chr10 122372474 122372713 -23216575 - MLT2C2 LTR ERVL -32 432 174 223 309 9 45 chr10 122372766 122372876 -23216412 + L2 LINE L2 1355 1460 -1854 1716 261 45 21 chr10 122373322 122373939 -23215349 + L1MD1 LINE L1 3313 3944 -2202 2317 127 36 33 chr10 122373940 122374301 -23214987 - THE1B LTR MaLR -2 362 1 1075 123 0 0 chr10 122374383 122374529 -23214759 - THE1C LTR MaLR -229 146 1 865 144 0 62 chr10 122374585 122374745 -23214543 + MER21A LTR ERV1 13 162 -769 * 1901 174 56 36 chr10 122374743 122375133 -23214155 + MER21A LTR ERV1 417 814 -117 662 244 91 0 chr10 122375164 122375340 -23213948 + L1MD1 LINE L1 3972 4163 -1983 475 213 81 37 chr10 122375340 122375476 -23213812 - MER21A LTR ERV1 -789 142 1 824 272 86 28 chr10 122375549 122375943 -23213345 + L1MD1 LINE L1 4171 4587 -1559 572 165 0 0 chr10 122375959 122376044 -23213244 - LTR12 LTR ERV1 -5 709 625 377 231 34 54 chr10 122376044 122376174 -23213114 - LTR30 LTR ERV1 -79 643 378 720 106 13 2 chr10 122376174 122376289 -23212999 - LTR12 LTR ERV1 -456 258 53 271 211 0 0 chr10 122376289 122376341 -23212947 - LTR30 LTR ERV1 -670 52 1 4226 191 110 36 chr10 122376356 122377864 -23211424 + L1MD1 LINE L1 4616 6242 0 2849 241 95 84 chr10 122377883 122379321 -23209967 + L1MEc LINE L1 43 1495 -4901 327 236 106 80 chr10 122379389 122379588 -23209700 - LTR50 LTR ERVL -582 213 10 317 339 64 22 chr10 122379655 122379988 -23209300 + L1MC/D LINE L1 5384 5737 -534 272 157 78 0 chr10 122380151 122380202 -23209086 - MLT2B1 LTR ERVL 0 520 466 * 280 164 15 60 chr10 122380200 122380267 -23209021 + MLT2B1 LTR ERVL 417 480 -40 201 176 0 0 chr10 122380267 122380301 -23208987 + (TA)n Simple_repeat Simple_repeat 2 35 0 207 0 0 0 chr10 122380309 122380332 -23208956 + (CA)n Simple_repeat Simple_repeat 2 24 0 382 318 76 0 chr10 122380693 122380825 -23208463 + MIR3 SINE MIR 4 145 -63 381 271 120 0 chr10 122381242 122381375 -23207913 - MER103 DNA DNA -15 151 3 661 324 94 13 chr10 122381388 122381798 -23207490 - LTR16C LTR ERVL 0 491 1 1034 173 0 30 chr10 122382046 122382214 -23207074 - FAM SINE Alu -12 163 1 2630 58 0 0 chr10 122382474 122382784 -23206504 + AluY SINE Alu 1 310 -1 266 196 0 18 chr10 122383287 122383343 -23205945 - L2 LINE L2 -80 3233 3179 2241 117 3 0 chr10 122383777 122384076 -23205212 - AluSp SINE Alu -13 300 1 1966 158 0 3 chr10 122385231 122385535 -23203753 - AluJb SINE Alu -9 303 1 323 279 25 66 chr10 122385968 122386090 -23203198 + MIR3 SINE MIR 91 207 -1 2797 127 29 2 chr10 122386849 122387260 -23202028 - MSTA LTR MaLR -6 422 1 1256 168 5 0 chr10 122387449 122387652 -23201636 + MSTB LTR MaLR 1 204 -222 904 198 213 15 chr10 122387779 122388052 -23201236 + MER110A LTR ERV1 1 327 -141 23 33 0 0 chr10 122388081 122388111 -23201177 + AT_rich Low_complexity Low_complexity 1 30 0 331 371 36 21 chr10 122388152 122388292 -23200996 + MIR3 SINE MIR 10 151 -57 219 260 0 0 chr10 122388303 122388353 -23200935 - L2 LINE L2 -3 3310 3261 21 0 0 0 chr10 122388986 122389007 -23200281 + AT_rich Low_complexity Low_complexity 1 21 0 239 300 123 7 chr10 122389132 122389283 -23200005 + MIR SINE MIR 40 206 -56 228 270 67 11 chr10 122389463 122389552 -23199736 + MLT1L LTR MaLR 150 243 -372 724 319 50 0 chr10 122389789 122390027 -23199261 + MIR SINE MIR 6 255 -7 22 70 0 0 chr10 122390027 122390070 -23199218 + AT_rich Low_complexity Low_complexity 1 43 0 21 57 0 0 chr10 122390198 122390233 -23199055 + AT_rich Low_complexity Low_complexity 1 35 0 217 274 0 0 chr10 122390238 122390289 -23198999 + (TA)n Simple_repeat Simple_repeat 2 52 0 209 207 0 17 chr10 122390376 122390434 -23198854 + (TA)n Simple_repeat Simple_repeat 2 58 0 282 116 0 0 chr10 122390434 122390477 -23198811 + (TG)n Simple_repeat Simple_repeat 2 44 0 213 323 31 0 chr10 122390527 122390592 -23198696 + MIR SINE MIR 64 130 -78 900 246 44 9 chr10 122390809 122391037 -23198251 + MLT1J2 LTR MaLR 1 236 -214 185 308 0 19 chr10 122392279 122392331 -23196957 - L2 LINE L2 -4 3268 3218 1890 144 22 0 chr10 122392491 122392807 -23196481 + AluSx SINE Alu 1 322 0 211 323 25 123 chr10 122393086 122393267 -23196021 - L2 LINE L2 -54 3259 3113 1909 223 39 30 chr10 122393267 122393730 -23195558 + MLT1C LTR MaLR 1 467 0 211 323 25 123 chr10 122393730 122393824 -23195464 - L2 LINE L2 -200 3113 3011 210 37 0 0 chr10 122394032 122394059 -23195229 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1634 119 0 137 chr10 122396147 122396484 -23192804 - AluJb SINE Alu -21 291 1 526 239 124 10 chr10 122396838 122397039 -23192249 + LTR50 LTR ERVL 4 227 -568 1046 190 22 66 chr10 122397210 122397436 -23191852 + MER58A DNA MER1_type 1 216 -8 396 0 0 0 chr10 122398127 122398171 -23191117 + (TA)n Simple_repeat Simple_repeat 2 45 0 1063 220 5 0 chr10 122398833 122399019 -23190269 + MER5A DNA MER1_type 1 187 -2 1603 142 84 15 chr10 122399280 122399554 -23189734 + AluJb SINE Alu 3 295 -17 282 373 87 42 chr10 122399584 122400104 -23189184 - L2 LINE L2 -412 2902 2360 228 67 0 0 chr10 122401334 122401364 -23187924 + (CA)n Simple_repeat Simple_repeat 1 30 0 1928 151 14 3 chr10 122402383 122402675 -23186613 + AluSx SINE Alu 1 295 -17 622 290 49 11 chr10 122402723 122402906 -23186382 + MIR SINE MIR 12 201 -61 239 339 18 67 chr10 122403054 122403219 -23186069 + MIR SINE MIR 20 176 -86 204 125 0 0 chr10 122403362 122403394 -23185894 + (GGGGA)n Simple_repeat Simple_repeat 1 32 0 328 294 28 51 chr10 122403604 122403818 -23185470 + L1ME LINE L1 5614 5822 -299 589 313 78 4 chr10 122405469 122405699 -23183589 + MIR SINE MIR 14 260 -2 775 209 102 14 chr10 122406167 122406382 -23182906 - MIR SINE MIR 0 262 29 240 184 0 103 chr10 122406410 122406497 -23182791 - MIR SINE MIR -62 200 123 578 289 50 13 chr10 122406553 122406712 -23182576 - MER97c DNA MER1_type? -907 183 19 257 216 68 45 chr10 122406854 122406942 -23182346 + MER5B DNA MER1_type 7 96 -82 1782 165 0 26 chr10 122407887 122408196 -23181092 + AluJb SINE Alu 1 301 -11 468 333 33 11 chr10 122408353 122408533 -23180755 + MIR SINE MIR 9 192 -70 484 297 80 46 chr10 122408543 122408931 -23180357 + LTR33A LTR ERVL 2 436 -87 1048 249 52 4 chr10 122409213 122409462 -23179826 - MIR SINE MIR 0 262 2 392 219 99 46 chr10 122409859 122410010 -23179278 - MIR SINE MIR -6 256 98 585 253 77 101 chr10 122410203 122410500 -23178788 + MLT1E-int LTR MaLR 1081 1370 -1 1705 253 106 24 chr10 122410502 122411047 -23178241 + MLT1E LTR MaLR 2 591 -2 400 295 98 49 chr10 122411147 122411391 -23177897 - MIR SINE MIR -6 256 1 4146 194 66 39 chr10 122412144 122412375 -23176913 - L1MD1 LINE L1 0 6502 6279 2550 153 69 5 chr10 122412375 122412812 -23176476 - MLT1C LTR MaLR -2 465 1 4146 194 66 39 chr10 122412812 122413881 -23175407 - L1MD1 LINE L1 -223 6279 5165 1154 207 54 32 chr10 122413889 122414169 -23175119 - L1MD1 LINE L1 -5442 967 682 593 189 213 6 chr10 122414973 122415137 -23174151 + MIR SINE MIR 34 231 -31 473 219 0 0 chr10 122415400 122415515 -23173773 + L1ME1 LINE L1 6067 6161 -5 308 306 28 0 chr10 122415911 122416019 -23173269 - MIR SINE MIR -111 151 41 2462 131 28 23 chr10 122416742 122417130 -23172158 - MLT1B LTR MaLR 0 390 1 1557 50 0 0 chr10 122417149 122417330 -23171958 + L1PA4 LINE L1 5972 6152 -3 374 272 125 22 chr10 122417370 122417506 -23171782 + LTR33A LTR ERVL 12 161 -362 819 257 55 0 chr10 122417578 122417796 -23171492 + LTR33A LTR ERVL 286 515 -8 23 0 0 0 chr10 122417892 122417915 -23171373 + AT_rich Low_complexity Low_complexity 1 23 0 563 206 8 30 chr10 122418014 122418145 -23171143 + MER69 DNA AcHobo 20 147 -2379 538 276 47 67 chr10 122418392 122418646 -23170642 + MIR SINE MIR 14 262 0 254 243 68 68 chr10 122419338 122419441 -23169847 - L1ME3A LINE L1 -103 6067 5965 565 246 87 33 chr10 122419629 122419963 -23169325 - L1ME LINE L1 -5164 906 555 1285 220 9 5 chr10 122420561 122420784 -23168504 - MER58A DNA MER1_type 0 224 1 394 282 24 16 chr10 122421057 122421181 -23168107 + MIR SINE MIR 70 194 -68 329 267 73 93 chr10 122421397 122421547 -23167741 + MIR3 SINE MIR 14 160 -48 207 309 0 0 chr10 122421692 122421747 -23167541 + MIR3 SINE MIR 151 205 -3 702 337 126 15 chr10 122422213 122422619 -23166669 + MLT1K LTR MaLR 134 584 -4 204 324 29 71 chr10 122422693 122422931 -23166357 + L2 LINE L2 2417 2644 -670 1558 183 30 24 chr10 122423012 122423176 -23166112 - AluJo SINE Alu -14 298 130 1691 131 0 0 chr10 122423176 122423412 -23165876 - AluSc SINE Alu -13 296 61 1558 183 30 24 chr10 122423412 122423542 -23165746 - AluJo SINE Alu -182 130 2 1178 250 58 15 chr10 122424135 122424463 -23164825 + L1ME1 LINE L1 38 379 -6017 2080 234 75 23 chr10 122424496 122425192 -23164096 + L1ME1 LINE L1 4727 5458 -757 8332 207 34 26 chr10 122425201 122428342 -23160946 + L1PA12 LINE L1 3 3980 -3604 1888 124 4 0 chr10 122428342 122428601 -23160687 + AluSp SINE Alu 40 299 -14 8332 207 34 26 chr10 122428601 122428764 -23160524 + L1PA12 LINE L1 3980 4140 -3444 3220 93 12 2 chr10 122428771 122429191 -23160097 + L1PA12 LINE L1 5745 6168 0 2722 224 47 25 chr10 122429195 122429959 -23159329 + L1ME1 LINE L1 5451 6231 -4 1137 241 154 45 chr10 122429990 122430438 -23158850 + MLT1H LTR MaLR 40 536 -13 1475 155 12 94 chr10 122430800 122431129 -23158159 + MLT1A1 LTR MaLR 3 304 -61 2047 128 4 0 chr10 122431129 122431410 -23157878 + AluSx SINE Alu 1 282 -30 255 61 0 0 chr10 122431411 122431444 -23157844 + (TAGA)n Simple_repeat Simple_repeat 4 36 0 234 0 0 0 chr10 122431444 122431470 -23157818 + (CA)n Simple_repeat Simple_repeat 1 26 0 398 134 104 0 chr10 122431479 122431546 -23157742 + MLT1A1 LTR MaLR 301 374 0 739 193 0 115 chr10 122431821 122432013 -23157275 - FAM SINE Alu -5 44 1 29 60 0 0 chr10 122432017 122432067 -23157221 + AT_rich Low_complexity Low_complexity 1 50 0 1906 158 0 31 chr10 122432425 122432742 -23156546 + AluJo SINE Alu 1 307 -5 180 0 0 0 chr10 122433434 122433454 -23155834 + (T)n Simple_repeat Simple_repeat 1 20 0 2887 10 0 0 chr10 122434025 122434334 -23154954 + AluYa5 SINE Alu 1 309 -2 185 316 18 18 chr10 122435822 122435879 -23153409 + L3b LINE CR1 1522 1578 -5 733 271 15 10 chr10 122436021 122436224 -23153064 + MLT1K LTR MaLR 382 585 -3 536 150 0 0 chr10 122436917 122436997 -23152291 + MADE1 DNA Mariner 1 80 0 4601 159 22 41 chr10 122437643 122438645 -23150643 + MER11C LTR ERVK 2 1071 0 3569 54 13 22 chr10 122438645 122439105 -23150183 - L1PA7 LINE L1 -32 6122 5667 480 86 86 0 chr10 122439824 122439894 -23149394 + MADE1 DNA Mariner 3 78 -2 1374 134 28 18 chr10 122439907 122440124 -23149164 + MER20 DNA MER1_type 1 219 0 376 274 29 0 chr10 122440990 122441092 -23148196 - MIR SINE MIR -108 154 50 226 257 43 0 chr10 122441146 122441216 -23148072 + L1ME4a LINE L1 5365 5437 -729 627 249 34 68 chr10 122441262 122441321 -23147967 + L1ME4a LINE L1 5542 5601 -520 1847 89 21 0 chr10 122441321 122441558 -23147730 + L1PA13 LINE L1 5911 6152 -11 627 249 34 68 chr10 122441558 122441823 -23147465 + L1ME4a LINE L1 5601 5855 -266 1058 241 14 0 chr10 122442511 122442731 -23146557 - MER58A DNA MER1_type 0 224 2 644 251 64 120 chr10 122443188 122443217 -23146071 + L2 LINE L2 2758 2787 -526 2761 204 70 10 chr10 122443217 122443815 -23145473 + MER92B LTR ERV1 3 636 0 644 251 64 120 chr10 122443815 122444347 -23144941 + L2 LINE L2 2787 3295 -18 225 309 168 0 chr10 122444486 122444635 -23144653 - MIR SINE MIR -11 251 78 542 307 117 24 chr10 122445182 122445422 -23143866 - MIR SINE MIR -2 260 3 2725 87 22 16 chr10 122445776 122446143 -23143145 - THE1C LTR MaLR -4 371 3 3161 153 13 23 chr10 122446593 122447117 -23142171 - LTR44 LTR ERV1 0 519 1 1250 209 37 26 chr10 122447174 122447442 -23141846 - MLT1F1 LTR MaLR 0 567 297 1071 72 24 6 chr10 122447448 122447490 -23141798 + (GAAA)n Simple_repeat Simple_repeat 1 41 -265 288 70 0 0 chr10 122447490 122447533 -23141755 + (CA)n Simple_repeat Simple_repeat 2 44 0 1071 72 24 6 chr10 122447533 122447583 -23141705 + (GAAA)n Simple_repeat Simple_repeat 41 306 0 1071 72 24 6 chr10 122447583 122447749 -23141539 + (GAAA)n Simple_repeat Simple_repeat 4 172 0 517 313 20 10 chr10 122447834 122448032 -23141256 - MLT1F1 LTR MaLR -342 200 1 517 233 92 97 chr10 122448384 122448612 -23140676 - MLT1I LTR MaLR 0 409 183 555 312 32 40 chr10 122448838 122449091 -23140197 + MIR SINE MIR 2 252 -10 1226 175 17 17 chr10 122449851 122450091 -23139197 + L1MB8 LINE L1 5937 6176 -2 311 135 39 0 chr10 122450135 122450187 -23139101 + L1ME3A LINE L1 6112 6165 -5 222 62 0 0 chr10 122450860 122450892 -23138396 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2250 90 0 10 chr10 122450896 122451185 -23138103 - AluSx SINE Alu -26 286 1 647 276 29 12 chr10 122452857 122453027 -23136261 + MER5B DNA MER1_type 4 176 -2 1774 183 104 22 chr10 122454108 122454474 -23134814 - MSTD LTR MaLR 0 396 1 279 0 0 0 chr10 122454751 122454782 -23134506 + (A)n Simple_repeat Simple_repeat 1 31 0 274 267 53 13 chr10 122455092 122455167 -23134121 + L2 LINE L2 3190 3267 -5 209 265 255 0 chr10 122455312 122455410 -23133878 - L2 LINE L2 -6 3307 3185 212 329 24 12 chr10 122455476 122455558 -23133730 - L2 LINE L2 -430 2884 2802 723 305 60 48 chr10 122455561 122455974 -23133314 + L2 LINE L2 2896 3313 0 318 316 204 21 chr10 122456457 122456830 -23132458 - L2 LINE L2 -870 2444 2004 215 385 17 8 chr10 122456890 122457007 -23132281 - MIR SINE MIR -61 147 30 499 275 100 12 chr10 122457743 122457903 -23131385 + MIR3 SINE MIR 14 187 -21 258 351 54 0 chr10 122459429 122459540 -23129748 + L3 LINE CR1 670 786 -791 378 309 54 0 chr10 122460182 122460331 -23128957 + MIR3 SINE MIR 45 201 -7 872 214 0 7 chr10 122460567 122460721 -23128567 + FRAM SINE Alu 1 152 -24 5575 167 28 9 chr10 122460844 122462133 -23127155 - L1MA9 LINE L1 -12 6300 4984 3852 173 72 13 chr10 122462857 122463549 -23125739 - MER44D DNA MER2_type 0 605 1 282 290 30 50 chr10 122463727 122463827 -23125461 + MIR SINE MIR 21 118 -90 998 222 60 105 chr10 122465321 122465789 -23123499 + LTR16A1 LTR ERVL 11 457 0 990 299 56 39 chr10 122466376 122466784 -23122504 + MLT1K LTR MaLR 3 417 -171 24 0 0 0 chr10 122466784 122466808 -23122480 + AT_rich Low_complexity Low_complexity 1 24 0 221 255 41 41 chr10 122467031 122467129 -23122159 - L2 LINE L2 -8 3305 3208 2186 115 0 34 chr10 122468036 122468359 -23120929 - AluSx SINE Alu 0 312 1 351 273 33 41 chr10 122469219 122469340 -23119948 - MER5A DNA MER1_type -35 154 35 443 265 39 55 chr10 122469482 122469587 -23119701 + MER5B DNA MER1_type 1 103 -75 2069 174 120 8 chr10 122469587 122469971 -23119317 - MSTA LTR MaLR 0 428 2 443 265 39 55 chr10 122469971 122470046 -23119242 + MER5B DNA MER1_type 103 178 0 312 217 0 122 chr10 122470065 122470180 -23119108 + MER5A DNA MER1_type 9 109 -80 979 217 0 5 chr10 122471458 122471647 -23117641 - MER5A DNA MER1_type -1 188 1 320 239 37 32 chr10 122471734 122471846 -23117442 - L1ME LINE L1 -650 5520 5406 237 297 0 0 chr10 122472102 122472166 -23117122 + GA-rich Low_complexity Low_complexity 3 66 0 493 281 10 62 chr10 122472830 122473022 -23116266 - MIR SINE MIR -58 204 23 368 283 128 76 chr10 122473280 122473609 -23115679 + L2 LINE L2 2927 3272 0 1802 253 65 27 chr10 122475753 122476331 -23112957 + MLT1G LTR MaLR 3 590 0 244 133 67 0 chr10 122476644 122476689 -23112599 + MIR SINE MIR 94 141 -67 416 271 85 0 chr10 122477435 122477553 -23111735 + L2 LINE L2 3145 3272 0 2349 104 7 0 chr10 122477564 122477873 -23111415 - AluY SINE Alu 0 311 1 327 179 39 39 chr10 122477967 122478045 -23111243 + MIR SINE MIR 99 176 -86 671 171 103 8 chr10 122478268 122478385 -23110903 - FLAM_A SINE Alu -5 128 1 249 262 148 25 chr10 122478425 122478547 -23110741 + LTR16C LTR ERVL 339 475 -16 1850 178 33 48 chr10 122478547 122478940 -23110348 + MLT1B LTR MaLR 1 387 -3 217 328 15 0 chr10 122478964 122479031 -23110257 + MIR SINE MIR 159 226 -36 450 200 8 58 chr10 122479274 122479394 -23109894 - MER3 DNA MER1_type -1 208 95 967 93 36 0 chr10 122479430 122479569 -23109719 + AluSc SINE Alu 166 309 0 313 290 65 22 chr10 122479827 122479965 -23109323 - L2 LINE L2 -1 3312 3169 204 414 7 7 chr10 122480022 122480162 -23109126 - MIR SINE MIR 0 262 123 1444 262 47 30 chr10 122480246 122480715 -23108573 - MER74B LTR ERVL -74 548 72 303 28 0 0 chr10 122480756 122480792 -23108496 + (CA)n Simple_repeat Simple_repeat 1 36 0 440 267 64 53 chr10 122480967 122481154 -23108134 - LTR16C LTR ERVL 0 491 303 287 224 40 40 chr10 122481533 122481609 -23107679 - L2 LINE L2 -50 3222 3147 2149 129 6 0 chr10 122482815 122483126 -23106162 + AluSq SINE Alu 1 313 0 693 243 150 98 chr10 122483245 122483936 -23105352 + LTR8A LTR ERV1 1 588 -15 262 296 128 17 chr10 122484130 122484302 -23104986 + L1ME LINE L1 4135 4325 -1821 909 141 0 0 chr10 122484305 122484440 -23104848 + AluJo SINE Alu 1 135 -177 305 342 80 27 chr10 122484651 122484838 -23104450 + L1ME LINE L1 5623 5819 -302 561 82 0 0 chr10 122485096 122485169 -23104119 - MADE1 DNA Mariner -2 78 6 263 250 62 62 chr10 122485625 122485721 -23103567 - L2 LINE L2 -13 3259 3164 521 296 19 0 chr10 122485944 122486103 -23103185 - MIR SINE MIR -21 241 80 310 330 10 0 chr10 122487587 122487690 -23101598 + MIR SINE MIR 81 184 -78 860 271 245 7 chr10 122487845 122488262 -23101026 + LTR33 LTR ERVL 6 521 0 828 234 166 25 chr10 122488262 122488582 -23100706 + MLT1K LTR MaLR 217 581 -7 258 273 0 0 chr10 122488779 122488834 -23100454 - MIR3 SINE MIR -54 154 100 2568 56 0 0 chr10 122489160 122489463 -23099825 - AluY SINE Alu -7 304 2 225 209 0 0 chr10 122489665 122489708 -23099580 + (TA)n Simple_repeat Simple_repeat 2 44 0 435 340 28 14 chr10 122489711 122489993 -23099295 + L1M4 LINE L1 3903 4188 -1958 250 342 60 11 chr10 122490142 122490326 -23098962 + MIR SINE MIR 60 252 -10 23 0 0 0 chr10 122490829 122490852 -23098436 + AT_rich Low_complexity Low_complexity 1 23 0 2197 107 13 0 chr10 122491187 122491508 -23097780 + AluSx SINE Alu 2 312 0 53 30 0 0 chr10 122491662 122491729 -23097559 + AT_rich Low_complexity Low_complexity 1 67 0 4916 159 32 8 chr10 122493376 122494147 -23095141 + MER54B LTR ERVL 2 791 -2 187 330 0 70 chr10 122494211 122494311 -23094977 - MIR SINE MIR -26 236 144 298 291 20 46 chr10 122494314 122494465 -23094823 - L2 LINE L2 -3 3310 3164 292 289 62 39 chr10 122494587 122494715 -23094573 - MIR SINE MIR -118 144 14 234 0 0 0 chr10 122495369 122495395 -23093893 + (A)n Simple_repeat Simple_repeat 1 26 0 193 369 44 6 chr10 122495397 122495557 -23093731 + L3b LINE CR1 1249 1414 -169 210 270 111 0 chr10 122495835 122495898 -23093390 + MIR SINE MIR 16 85 -177 21 0 0 0 chr10 122496052 122496073 -23093215 + AT_rich Low_complexity Low_complexity 1 21 0 240 252 29 39 chr10 122496332 122496435 -23092853 - L1MC4 LINE L1 -1327 6715 6614 807 240 77 24 chr10 122496736 122496944 -23092344 + MER58A DNA MER1_type 6 224 0 862 99 0 0 chr10 122497202 122497313 -23091975 - AluSq/x SINE Alu -202 111 1 6071 118 23 3 chr10 122497321 122498205 -23091083 - HSMAR2 DNA Mariner -400 902 2 798 206 29 12 chr10 122498483 122498653 -23090635 + MER5A DNA MER1_type 8 180 -9 1147 205 70 51 chr10 122498674 122498939 -23090349 - MER58D DNA MER1_type -2038 382 107 1930 186 8 50 chr10 122498939 122499320 -23089968 + MLT1A1 LTR MaLR 1 365 0 1147 205 70 51 chr10 122499320 122499424 -23089864 - MER58D DNA MER1_type -2313 107 6 1007 176 44 84 chr10 122499507 122499734 -23089554 + MER20 DNA MER1_type 2 219 0 675 250 134 9 chr10 122500458 122500682 -23088606 - MIR SINE MIR 0 262 11 1624 176 14 10 chr10 122500759 122501048 -23088240 + AluJo SINE Alu 13 302 -10 26 0 0 0 chr10 122502776 122502802 -23086486 + AT_rich Low_complexity Low_complexity 1 26 0 364 242 132 66 chr10 122503252 122503434 -23085854 - MIR SINE MIR -4 258 65 1744 206 88 92 chr10 122503506 122504050 -23085238 + MLT1F LTR MaLR 1 542 0 1116 281 59 9 chr10 122504600 122504938 -23084350 + LTR16A LTR ERVL 84 438 -12 490 246 23 31 chr10 122506151 122506281 -23083007 - MER94 DNA DNA 0 134 6 907 279 71 27 chr10 122507163 122507601 -23081687 - L1MC4a LINE L1 -1760 6048 5592 1042 145 72 5 chr10 122507609 122507816 -23081472 - L1MA7 LINE L1 -3 6288 6068 904 144 0 20 chr10 122507816 122507969 -23081319 + L1MA7 LINE L1 5737 5886 -405 362 276 90 8 chr10 122507970 122508104 -23081184 - L1MC4a LINE L1 -2214 5594 5450 295 263 13 122 chr10 122508675 122508831 -23080457 + MER5A DNA MER1_type 50 188 -1 26 93 0 0 chr10 122509640 122509715 -23079573 + AT_rich Low_complexity Low_complexity 1 75 0 561 270 137 4 chr10 122509768 122509994 -23079294 - L1ME3 LINE L1 -53 6109 5854 798 229 34 6 chr10 122510345 122510524 -23078764 - MER5A DNA MER1_type -5 184 1 2822 185 45 63 chr10 122510601 122511272 -23078016 - MER67B LTR ERV1 0 661 3 5263 214 22 12 chr10 122511582 122512741 -23076547 + Charlie1a DNA MER1_type 1 1171 -284 314 311 102 6 chr10 122513227 122513394 -23075894 + L1ME LINE L1 5610 5792 -329 727 268 109 36 chr10 122514315 122514424 -23074864 + MLT1I LTR MaLR 28 128 -281 2804 111 0 14 chr10 122514424 122514793 -23074495 - THE1B LTR MaLR 0 364 1 727 268 109 36 chr10 122514793 122514985 -23074303 + MLT1I LTR MaLR 128 351 -58 * 942 256 19 5 chr10 122514982 122515193 -23074095 - MER58A DNA MER1_type -6 218 5 386 145 65 0 chr10 122515193 122515255 -23074033 + MLT1I LTR MaLR 340 405 -4 547 232 83 33 chr10 122515619 122515789 -23073499 - MER5A DNA MER1_type -9 169 2 422 318 80 20 chr10 122515883 122516084 -23073204 + MIR SINE MIR 15 227 -35 383 238 128 88 chr10 122516175 122516286 -23073002 + MER106A DNA MER1_type 1 106 -130 1630 138 132 51 chr10 122516286 122516597 -23072691 - MER1B DNA MER1_type 0 337 2 383 238 128 88 chr10 122516597 122516712 -23072576 + MER106A DNA MER1_type 106 236 0 275 326 53 0 chr10 122516727 122516822 -23072466 - MIR SINE MIR -147 115 16 1287 202 182 20 chr10 122516957 122517298 -23071990 - MSTD LTR MaLR 0 396 1 314 346 16 31 chr10 122517400 122517500 -23071788 + MIR SINE MIR 30 129 -133 1109 204 27 23 chr10 122517500 122517720 -23071568 - MER58A DNA MER1_type 0 224 4 314 346 16 31 chr10 122517720 122517746 -23071542 + MIR SINE MIR 129 154 -108 718 265 75 82 chr10 122517753 122518269 -23071019 - MLT1H1 LTR MaLR -2 553 67 1337 311 49 12 chr10 122518434 122519119 -23070169 + L2 LINE L2 2585 3299 -14 270 207 0 0 chr10 122519127 122519185 -23070103 + GA-rich Low_complexity Low_complexity 3 60 0 2109 124 3 0 chr10 122519659 122519949 -23069339 - AluSx SINE Alu -13 299 9 410 308 101 30 chr10 122520050 122520232 -23069056 + MIR SINE MIR 19 217 -45 2159 129 3 0 chr10 122520232 122520542 -23068746 + AluSx SINE Alu 1 311 -1 410 308 101 30 chr10 122520542 122520557 -23068731 + MIR SINE MIR 217 230 -32 2059 228 105 24 chr10 122522186 122522691 -23066597 - MLT2F LTR ERVL -109 554 9 22603 40 0 1 chr10 122522745 122526170 -23063118 + L1PA5 LINE L1 2758 6180 0 400 196 22 65 chr10 122526552 122526644 -23062644 - MER5A DNA MER1_type -6 183 96 597 232 44 53 chr10 122526796 122527209 -23062079 - LTR33 LTR ERVL -23 498 10 1972 143 3 13 chr10 122528138 122528439 -23060849 + AluJo SINE Alu 1 298 -14 352 211 72 56 chr10 122528619 122528799 -23060489 - Charlie7 DNA MER1_type -3 2609 2427 * 370 270 20 20 chr10 122528785 122528885 -23060403 - Charlie7 DNA MER1_type -2511 101 2 528 346 37 4 chr10 122529575 122529818 -23059470 - MIR SINE MIR -3 259 9 292 335 89 31 chr10 122530188 122530412 -23058876 + MIR SINE MIR 20 256 -6 2340 78 0 13 chr10 122531763 122532072 -23057216 - AluY SINE Alu -6 305 1 219 189 0 0 chr10 122532095 122532148 -23057140 + T-rich Low_complexity Low_complexity 1 53 0 291 54 0 0 chr10 122532299 122532336 -23056952 + (CA)n Simple_repeat Simple_repeat 2 38 0 302 275 83 8 chr10 122532716 122532836 -23056452 + MIR3 SINE MIR 66 194 -14 301 172 21 0 chr10 122533052 122533145 -23056143 + (TA)n Simple_repeat Simple_repeat 2 96 0 1458 206 0 18 chr10 122533147 122533419 -23055869 - AluJb SINE Alu -45 267 1 301 260 29 39 chr10 122533504 122533608 -23055680 - MIR SINE MIR -4 258 156 2513 70 0 0 chr10 122534472 122534774 -23054514 - AluY SINE Alu -9 302 1 346 338 45 0 chr10 122534848 122534981 -23054307 + L2 LINE L2 3123 3261 -11 231 114 0 0 chr10 122534982 122535017 -23054271 + (TGAA)n Simple_repeat Simple_repeat 4 38 0 346 285 92 8 chr10 122536503 122536633 -23052655 - MIR SINE MIR -61 201 61 348 287 52 0 chr10 122536837 122536952 -23052336 - L2 LINE L2 -23 3290 3170 661 284 70 9 chr10 122537066 122537281 -23052007 - MIR SINE MIR -33 229 2 250 289 22 22 chr10 122537534 122537624 -23051664 - MIR SINE MIR -73 189 100 458 250 74 46 chr10 122537799 122538015 -23051273 + MLT1J LTR MaLR 274 495 -16 309 196 18 0 chr10 122538030 122538086 -23051202 - MIR SINE MIR -165 97 41 3659 131 40 30 chr10 122538548 122539144 -23050144 + MER7C DNA MER2_type 1 602 0 2365 89 0 0 chr10 122539210 122539502 -23049786 + AluY SINE Alu 1 292 -19 21 57 0 0 chr10 122539771 122539806 -23049482 + AT_rich Low_complexity Low_complexity 1 35 0 192 276 276 0 chr10 122540663 122540761 -23048527 + L2 LINE L2 3143 3267 -5 1596 241 81 18 chr10 122541051 122541486 -23047802 - MLT1C LTR MaLR 0 467 6 1858 166 3 13 chr10 122541642 122541956 -23047332 + AluSx SINE Alu 1 311 -1 269 335 84 0 chr10 122542018 122542185 -23047103 + L1ME LINE L1 5684 5864 -257 352 279 8 0 chr10 122542203 122542332 -23046956 + (TA)n Simple_repeat Simple_repeat 2 131 0 538 257 69 9 chr10 122543362 122543527 -23045761 - MIR SINE MIR -63 145 16 43518 36 21 1 chr10 122543784 122549848 -23039440 + L1PA2 LINE L1 2 6192 0 695 228 32 91 chr10 122550919 122551138 -23038150 - MER63A DNA MER1_type -4 206 1 422 258 8 58 chr10 122551620 122551740 -23037548 + L2 LINE L2 3159 3272 0 197 336 96 10 chr10 122551823 122551927 -23037361 + MIR SINE MIR 30 142 -66 297 292 83 55 chr10 122551931 122552124 -23037164 + MIR SINE MIR 48 249 -13 867 279 95 53 chr10 122552397 122552848 -23036440 - MLT1L LTR MaLR -2 613 144 201 138 0 0 chr10 122552980 122553009 -23036279 + (CA)n Simple_repeat Simple_repeat 2 30 0 257 295 238 8 chr10 122553105 122553227 -23036061 - MIR SINE MIR -110 152 3 23 0 0 0 chr10 122553973 122553996 -23035292 + AT_rich Low_complexity Low_complexity 1 23 0 581 163 11 11 chr10 122553996 122554088 -23035200 - FLAM_C SINE Alu -21 122 31 3474 104 34 24 chr10 122554270 122554770 -23034518 + MER1A DNA MER1_type 1 505 -24 464 286 74 26 chr10 122555019 122555208 -23034080 - MIR SINE MIR -30 232 35 222 245 0 88 chr10 122555237 122555339 -23033949 + MIR SINE MIR 125 217 -45 296 360 19 6 chr10 122557522 122557683 -23031605 + MIR SINE MIR 3 165 -97 972 175 134 5 chr10 122557719 122557913 -23031375 + MER20 DNA MER1_type 1 219 0 1658 204 51 17 chr10 122557980 122558463 -23030825 + MLT2A2 LTR ERVL 1 516 -38 832 127 0 0 chr10 122558471 122558589 -23030699 - MLT2A2 LTR ERVL -335 118 1 312 351 59 15 chr10 122558616 122558818 -23030470 + MIR SINE MIR 2 212 -50 3215 118 7 2 chr10 122558891 122559347 -23029941 + L1PB1 LINE L1 5690 6147 -4 1977 172 24 21 chr10 122560058 122560395 -23028893 + LTR32 LTR ERVL 15 352 -119 794 179 7 7 chr10 122560452 122560603 -23028685 + LTR32 LTR ERVL 318 468 -3 1850 145 0 14 chr10 122560748 122561030 -23028258 + AluSx SINE Alu 14 291 -21 845 150 183 114 chr10 122562276 122562522 -23026766 + AluJo SINE Alu 1 263 -49 336 48 0 0 chr10 122562547 122562589 -23026699 + (GGAA)n Simple_repeat Simple_repeat 3 44 0 207 287 58 11 chr10 122562895 122562982 -23026306 + L2 LINE L2 3180 3270 -2 390 287 80 21 chr10 122563576 122563754 -23025534 - MIR SINE MIR -63 145 4 267 287 11 11 chr10 122565312 122565399 -23023889 - MIR SINE MIR 0 262 176 1021 127 6 0 chr10 122565408 122565565 -23023723 - AluSp/q SINE Alu 0 313 156 1338 136 0 45 chr10 122565573 122565793 -23023495 - AluSx SINE Alu -102 210 1 346 299 212 0 chr10 122565888 122566025 -23023263 + L2 LINE L2 3106 3271 -1 3254 274 91 53 chr10 122566280 122567510 -23021778 + HAL1 LINE L1 5 1187 -1320 219 36 0 0 chr10 122567510 122567538 -23021750 + (CAA)n Simple_repeat Simple_repeat 1 28 0 3254 274 91 53 chr10 122567538 122567618 -23021670 + HAL1 LINE L1 1187 1262 -1245 1790 181 0 3 chr10 122567618 122567927 -23021361 + AluJo SINE Alu 3 310 -2 3254 274 91 53 chr10 122567927 122568380 -23020908 + HAL1 LINE L1 1262 1836 -671 468 244 44 84 chr10 122568548 122568773 -23020515 + HAL1 LINE L1 2240 2455 -52 205 291 163 0 chr10 122570898 122570984 -23018304 + MIR3 SINE MIR 98 197 -11 244 284 57 50 chr10 122571046 122571187 -23018101 - L2 LINE L2 -537 2777 2636 25 0 0 0 chr10 122571246 122571271 -23018017 + AT_rich Low_complexity Low_complexity 1 25 0 214 298 0 48 chr10 122571291 122571375 -23017913 - MIR3 SINE MIR -19 189 110 269 316 98 29 chr10 122571826 122572000 -23017288 - MLT1K LTR MaLR -272 316 131 1352 151 85 0 chr10 122572657 122572869 -23016419 - MER30 DNA MER1_type 0 230 1 621 282 31 0 chr10 122573591 122573754 -23015534 + MER5A DNA MER1_type 8 175 -14 435 208 69 46 chr10 122573772 122573902 -23015386 - MER5B DNA MER1_type -45 133 1 205 242 0 81 chr10 122576629 122576691 -23012597 + L2 LINE L2 3023 3079 -193 350 57 19 0 chr10 122576805 122576858 -23012430 + (TC)n Simple_repeat Simple_repeat 1 54 0 769 262 103 30 chr10 122578251 122578606 -23010682 + MLT1J2 LTR MaLR 66 511 0 1103 284 69 30 chr10 122578606 122579099 -23010189 + MLT1L LTR MaLR 25 536 -79 572 297 23 6 chr10 122579123 122579298 -23009990 - MER5B DNA MER1_type 0 178 1 206 291 63 63 chr10 122579300 122579379 -23009909 + L2 LINE L2 3193 3271 -42 226 304 43 0 chr10 122580264 122580333 -23008955 - MIR SINE MIR -112 150 79 1100 323 59 0 chr10 122580385 122580775 -23008513 - MLT1H LTR MaLR -96 453 41 298 250 16 0 chr10 122580787 122580851 -23008437 - MIR SINE MIR -177 85 21 2305 124 70 48 chr10 122581091 122581447 -23007841 - THE1B LTR MaLR 0 364 1 12673 94 2 0 chr10 122581447 122583024 -23006264 - THE1B-int LTR MaLR 0 1580 1 2266 141 73 12 chr10 122583024 122583365 -23005923 - THE1B LTR MaLR 0 364 3 206 358 86 37 chr10 122584672 122584834 -23004454 + MER5A DNA MER1_type 17 186 -3 884 163 6 62 chr10 122585140 122585318 -23003970 - MER50 LTR ERV1 0 734 567 2822 149 4 0 chr10 122585319 122585774 -23003514 + L1P LINE L1 1 457 -5689 241 234 0 52 chr10 122585850 122585927 -23003361 + CT-rich Low_complexity Low_complexity 2 74 0 21322 32 2 1 chr10 122586038 122588590 -23000698 + L1P LINE L1 1674 4226 -1920 2228 99 7 0 chr10 122588690 122588983 -23000305 + THE1A LTR MaLR 61 355 0 502 227 143 19 chr10 122589036 122589190 -23000098 - MER50 LTR ERV1 -552 182 10 934 197 44 25 chr10 122589401 122589604 -22999684 + MER20 DNA MER1_type 12 218 -1 395 339 59 88 chr10 122589739 122590093 -22999195 - L2 LINE L2 -2 3270 2927 482 298 33 26 chr10 122590274 122590425 -22998863 + MER5B DNA MER1_type 1 152 -26 2101 126 0 3 chr10 122591933 122592242 -22997046 + AluSx SINE Alu 1 308 -4 27 0 0 0 chr10 122592790 122592817 -22996471 + AT_rich Low_complexity Low_complexity 1 27 0 213 214 162 68 chr10 122593037 122593154 -22996134 - L2 LINE L2 -23 3290 3163 514 339 78 9 chr10 122593214 122593432 -22995856 - MIR SINE MIR -10 252 20 222 225 28 70 chr10 122593491 122593562 -22995726 - L2 LINE L2 -208 3064 2997 531 312 93 41 chr10 122593693 122594155 -22995133 - L2 LINE L2 -561 2753 2268 287 250 17 0 chr10 122594779 122594839 -22994449 - L2 LINE L2 -7 3306 3246 3228 145 27 4 chr10 122595560 122596119 -22993169 - L1MB7 LINE L1 -20 6164 5593 2663 164 8 41 chr10 122596130 122596401 -22992887 - L1MB7 LINE L1 -881 5265 5019 2078 121 3 0 chr10 122596401 122596698 -22992590 + AluSx SINE Alu 1 298 -14 2663 164 8 41 chr10 122596698 122596957 -22992331 - L1MB7 LINE L1 -1127 5019 4753 783 144 16 188 chr10 122596957 122597207 -22992081 - L1M4 LINE L1 -573 5605 5399 539 270 139 34 chr10 122598455 122598722 -22990566 + MLT1K LTR MaLR 219 513 -75 296 213 33 0 chr10 122598780 122598841 -22990447 + MLT1K LTR MaLR 526 588 0 516 327 136 9 chr10 122599834 122600054 -22989234 + MIR SINE MIR 5 252 -10 874 242 23 9 chr10 122600387 122600602 -22988686 + MER20 DNA MER1_type 2 219 0 265 355 0 18 chr10 122600617 122600727 -22988561 + MER5A DNA MER1_type 8 115 -74 322 243 0 0 chr10 122600986 122601056 -22988232 - MIR3 SINE MIR -18 190 121 1110 102 0 12 chr10 122601524 122601690 -22987598 - AluSg/x SINE Alu -7 305 142 449 121 12 0 chr10 122601738 122601821 -22987467 + (CA)n Simple_repeat Simple_repeat 1 84 0 374 286 126 30 chr10 122602674 122602873 -22986415 + L2 LINE L2 2866 3083 -230 323 179 0 26 chr10 122602905 122602983 -22986305 + CT-rich Low_complexity Low_complexity 1 76 0 218 344 22 0 chr10 122602993 122603083 -22986205 - MIR SINE MIR -5 257 166 310 309 81 48 chr10 122603096 122603368 -22985920 - LTR67 LTR ERVL 0 557 277 360 283 186 0 chr10 122603781 122603926 -22985362 + MER5A DNA MER1_type 11 182 -7 559 298 18 6 chr10 122603944 122604115 -22985173 - MER5B DNA MER1_type -3 175 3 323 243 41 30 chr10 122604312 122604448 -22984840 - MIR3 SINE MIR -19 243 109 631 244 88 38 chr10 122605006 122605244 -22984044 - MIR SINE MIR -12 250 1 210 239 0 22 chr10 122605805 122605851 -22983437 + CT-rich Low_complexity Low_complexity 2 46 0 283 319 0 22 chr10 122606798 122606889 -22982399 - MIR SINE MIR -71 137 49 2059 71 4 4 chr10 122607245 122607513 -22981775 - AluSc SINE Alu -9 300 33 2357 119 3 23 chr10 122607654 122607997 -22981291 + MER1B DNA MER1_type 1 336 -1 301 256 26 126 chr10 122608205 122608340 -22980948 - L2 LINE L2 -91 3222 3126 1159 172 42 0 chr10 122608340 122608555 -22980733 - MER58A DNA MER1_type 0 224 1 301 256 26 126 chr10 122608555 122608689 -22980599 - L2 LINE L2 -187 3126 2980 352 314 56 59 chr10 122608733 122609036 -22980252 - L2 LINE L2 -463 2851 2550 246 313 61 37 chr10 122609658 122609821 -22979467 + MIR3 SINE MIR 18 184 -24 468 317 32 0 chr10 122610243 122610366 -22978922 - L2 LINE L2 -4 3268 3142 1546 196 129 29 chr10 122610691 122610909 -22978379 - MLT1C LTR MaLR -2 465 270 2393 166 16 26 chr10 122610909 122611338 -22977950 + MSTB LTR MaLR 2 426 0 1546 196 129 29 chr10 122611338 122611537 -22977751 - MLT1C LTR MaLR -197 270 6 236 287 153 20 chr10 122611537 122611791 -22977497 - L2 LINE L2 -567 2747 2460 671 248 81 48 chr10 122612150 122612445 -22976843 - L1MC5 LINE L1 -127 7834 7530 255 114 0 0 chr10 122612898 122612942 -22976346 + (CA)n Simple_repeat Simple_repeat 1 44 0 1430 255 71 32 chr10 122612990 122613579 -22975709 + L1MC5 LINE L1 7302 7913 -48 229 342 0 0 chr10 122614092 122614171 -22975117 + MIR SINE MIR 44 122 -86 214 328 25 57 chr10 122615439 122615561 -22973727 - L2 LINE L2 -19 3294 3177 182 267 89 0 chr10 122616680 122616725 -22972563 - L2 LINE L2 -64 3249 3201 504 289 81 83 chr10 122617136 122617190 -22972098 + L2 LINE L2 2827 2880 -392 2154 118 59 34 chr10 122617190 122617545 -22971743 + THE1B LTR MaLR 1 364 0 504 289 81 83 chr10 122617545 122617937 -22971351 + L2 LINE L2 2880 3272 0 314 260 311 25 chr10 122619075 122619271 -22970017 - MIR SINE MIR -6 256 5 235 274 89 52 chr10 122620081 122620216 -22969072 - Charlie8 DNA MER1_type -2155 262 123 2086 124 3 0 chr10 122620442 122620749 -22968539 + AluSx SINE Alu 1 308 -4 2027 131 14 0 chr10 122621299 122621596 -22967692 - AluSx SINE Alu -11 301 1 567 243 49 27 chr10 122621632 122621817 -22967471 - LTR16C LTR ERVL 0 491 303 2129 94 3 3 chr10 122622861 122623159 -22966129 + AluSc SINE Alu 1 298 -11 384 241 163 28 chr10 122624046 122624187 -22965101 + MIR SINE MIR 81 240 -22 1366 253 38 47 chr10 122624529 122624999 -22964289 + MER74B LTR ERVL 89 554 -68 383 191 14 153 chr10 122625640 122625855 -22963433 - MER5A DNA MER1_type -4 185 1 317 242 0 0 chr10 122626345 122626411 -22962877 + MER94 DNA DNA 8 73 -61 335 196 163 0 chr10 122628980 122629072 -22960216 + MER103 DNA DNA 10 116 -50 261 219 0 47 chr10 122630802 122630866 -22958422 + MER91B DNA MER1_type 2 62 -128 25 0 0 0 chr10 122632030 122632055 -22957233 + AT_rich Low_complexity Low_complexity 1 25 0 1275 153 42 5 chr10 122632462 122632677 -22956611 + MER46A DNA MER2_type 14 236 0 183 391 0 0 chr10 122633300 122633364 -22955924 + MIR SINE MIR 138 201 -61 379 242 211 16 chr10 122633409 122633537 -22955751 + MIR3 SINE MIR 8 160 -48 1686 249 69 13 chr10 122633577 122634102 -22955186 + L1ME3A LINE L1 5422 5975 -195 1844 152 31 0 chr10 122636273 122636563 -22952725 - AluSx SINE Alu -13 299 1 293 231 0 106 chr10 122637495 122637544 -22951744 + MIR3 SINE MIR 114 148 -60 2325 93 0 16 chr10 122637544 122637855 -22951433 - AluSc SINE Alu -3 306 1 293 231 0 106 chr10 122637855 122637909 -22951379 + MIR3 SINE MIR 148 206 -2 331 324 57 0 chr10 122639529 122639634 -22949654 - L2 LINE L2 -4 3309 3199 432 318 74 6 chr10 122640504 122640680 -22948608 + MIR SINE MIR 4 191 -71 22 0 0 0 chr10 122640819 122640841 -22948447 + AT_rich Low_complexity Low_complexity 1 22 0 26 30 0 0 chr10 122640993 122641026 -22948262 + AT_rich Low_complexity Low_complexity 1 33 0 187 311 121 38 chr10 122641522 122641654 -22947634 + L2 LINE L2 3163 3305 -8 22 35 0 0 chr10 122642235 122642264 -22947024 + AT_rich Low_complexity Low_complexity 1 29 0 2189 93 0 27 chr10 122643734 122644034 -22945254 + AluSq SINE Alu 1 292 -21 205 178 0 44 chr10 122644143 122644188 -22945100 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 1455 105 35 19 chr10 122644214 122644472 -22944816 - L1MA4 LINE L1 -11 6289 6028 21 0 0 0 chr10 122644482 122644503 -22944785 + AT_rich Low_complexity Low_complexity 1 21 0 190 184 130 101 chr10 122644599 122644703 -22944585 - MIR SINE MIR -62 146 25 624 246 6 12 chr10 122645633 122645804 -22943484 + L1ME3A LINE L1 5536 5705 -465 1307 219 91 8 chr10 122645815 122646198 -22943090 + L1ME3A LINE L1 5752 6166 -4 213 39 0 0 chr10 122647023 122647049 -22942239 + (CAA)n Simple_repeat Simple_repeat 2 27 0 3371 100 61 29 chr10 122648017 122648528 -22940760 + MER1A DNA MER1_type 1 527 0 187 241 0 37 chr10 122649955 122650009 -22939279 + L2 LINE L2 2916 2967 -346 247 200 15 0 chr10 122650342 122650407 -22938881 + L1ME4a LINE L1 6056 6121 0 22 0 0 0 chr10 122650442 122650464 -22938824 + AT_rich Low_complexity Low_complexity 1 22 0 450 289 63 38 chr10 122650927 122651086 -22938202 + MIR SINE MIR 20 182 -80 275 207 35 0 chr10 122653152 122653210 -22936078 - L2 LINE L2 0 3313 3254 22 0 0 0 chr10 122655406 122655428 -22933860 + AT_rich Low_complexity Low_complexity 1 22 0 2084 128 0 0 chr10 122656600 122656925 -22932363 + AluSx SINE Alu 1 325 0 200 217 22 0 chr10 122657103 122657149 -22932139 - MIR SINE MIR -113 149 103 21 36 0 0 chr10 122659312 122659340 -22929948 + AT_rich Low_complexity Low_complexity 1 28 0 628 270 65 49 chr10 122661386 122661630 -22927658 + MIR SINE MIR 6 245 -17 22 0 0 0 chr10 122662151 122662173 -22927115 + GC_rich Low_complexity Low_complexity 1 22 0 965 159 30 0 chr10 122662631 122662832 -22926456 + L1MA7 LINE L1 6064 6270 -21 2327 230 79 70 chr10 122662866 122663890 -22925398 + L1MEc LINE L1 47 1083 -5313 498 17 0 0 chr10 122663890 122663949 -22925339 + (CA)n Simple_repeat Simple_repeat 2 60 0 2327 230 79 70 chr10 122663949 122663989 -22925299 + L1MEc LINE L1 1083 1121 -5275 1038 88 0 0 chr10 122663997 122664134 -22925154 + AluY SINE Alu 174 310 -1 2852 255 69 29 chr10 122664134 122664838 -22924450 + L1MEc LINE L1 1122 1796 -4419 1942 112 0 61 chr10 122664838 122665178 -22924110 - AluSx SINE Alu 0 312 6 2852 255 69 29 chr10 122665178 122666696 -22922592 + L1MEc LINE L1 1796 3389 -2826 229 250 36 54 chr10 122666980 122667092 -22922196 - L3 LINE CR1 -756 821 712 418 311 20 7 chr10 122667131 122667282 -22922006 - MIR SINE MIR -108 154 2 499 321 132 22 chr10 122667303 122667614 -22921674 - L3 LINE CR1 -978 599 255 295 270 87 17 chr10 122667597 122667712 -22921576 - L2 LINE L2 0 3313 3191 * 227 352 28 0 chr10 122667728 122667799 -22921489 - L3 LINE CR1 -1299 278 206 277 277 50 50 chr10 122667906 122668065 -22921223 + MLT1L LTR MaLR 129 287 -328 1650 123 20 8 chr10 122668616 122668860 -22920428 + AluSc SINE Alu 61 307 -2 599 300 31 106 chr10 122670532 122671063 -22918225 - L2 LINE L2 0 3272 2776 331 237 0 0 chr10 122671303 122671379 -22917909 - MIR SINE MIR -5 257 182 511 266 94 22 chr10 122671382 122671657 -22917631 - LTR33A LTR ERVL 0 523 229 435 202 8 47 chr10 122671853 122671994 -22917294 - MIR SINE MIR -61 147 50 668 214 102 26 chr10 122672310 122672615 -22916673 - MLT1I LTR MaLR 0 409 8 289 326 109 44 chr10 122673159 122673453 -22915835 + L2 LINE L2 2393 2705 -609 378 312 101 61 chr10 122673567 122674085 -22915203 + L2 LINE L2 2720 3265 -7 3174 14 0 0 chr10 122675821 122676183 -22913105 - L1PA2 LINE L1 -2 6153 5792 601 246 49 0 chr10 122676383 122676525 -22912763 + MIR SINE MIR 104 252 -10 3904 118 26 68 chr10 122676916 122677253 -22912035 + L1MA7 LINE L1 5556 5906 -385 2112 105 27 0 chr10 122677253 122677422 -22911866 - AluSx SINE Alu -9 303 121 369 0 0 0 chr10 122677422 122677463 -22911825 + (TG)n Simple_repeat Simple_repeat 2 42 0 2112 105 27 0 chr10 122677463 122677588 -22911700 - AluSx SINE Alu -191 121 1 3904 118 26 68 chr10 122677588 122677948 -22911340 + L1MA7 LINE L1 5906 6221 -70 2236 107 74 3 chr10 122677948 122678286 -22911002 - THE1B LTR MaLR 0 364 3 3904 118 26 68 chr10 122678286 122678348 -22910940 + L1MA7 LINE L1 6221 6284 -7 437 103 0 13 chr10 122678500 122678578 -22910710 + (TA)n Simple_repeat Simple_repeat 1 77 0 225 0 0 0 chr10 122678577 122678602 -22910686 + (GA)n Simple_repeat Simple_repeat 2 26 0 * 1896 145 7 14 chr10 122678635 122678924 -22910364 - AluJb SINE Alu -25 287 1 195 111 37 19 chr10 122678990 122679044 -22910244 + GA-rich Low_complexity Low_complexity 1 55 0 738 337 126 17 chr10 122679725 122680213 -22909075 + L2 LINE L2 2774 3313 0 684 265 99 5 chr10 122680227 122680450 -22908838 - MIR SINE MIR -4 258 15 896 219 31 0 chr10 122680473 122680665 -22908623 - MER58A DNA MER1_type -25 199 2 565 297 32 14 chr10 122681987 122682206 -22907082 - MIR SINE MIR 0 262 40 213 94 0 0 chr10 122682573 122682605 -22906683 + (T)n Simple_repeat Simple_repeat 1 32 0 11773 17 0 0 chr10 122683040 122685163 -22904125 + L1PA2 LINE L1 4031 6153 -2 244 182 0 0 chr10 122685311 122685355 -22903933 + L2 LINE L2 3250 3293 -20 940 222 19 5 chr10 122685415 122685622 -22903666 + MER20 DNA MER1_type 1 210 -9 346 260 70 10 chr10 122685627 122685727 -22903561 - MIR3 SINE MIR -49 159 54 276 356 11 0 chr10 122687439 122687529 -22901759 + L2 LINE L2 3096 3186 -86 291 289 0 29 chr10 122689657 122689761 -22899527 - MIR3 SINE MIR -4 204 104 220 294 70 42 chr10 122689914 122690057 -22899231 + L2 LINE L2 3158 3304 -9 218 289 92 0 chr10 122690072 122690148 -22899140 - MIR SINE MIR -81 181 99 302 104 0 164 chr10 122690566 122690605 -22898683 + MADE1 DNA Mariner 1 26 -54 2324 79 0 3 chr10 122690605 122690895 -22898393 - AluY SINE Alu -22 289 1 302 104 0 164 chr10 122690895 122690922 -22898366 + MADE1 DNA Mariner 26 56 -24 446 274 98 25 chr10 122690982 122691186 -22898102 + MIR SINE MIR 20 238 -24 263 315 63 0 chr10 122691353 122691464 -22897824 + L2 LINE L2 3152 3269 -3 484 261 100 11 chr10 122691603 122691783 -22897505 + MIR SINE MIR 66 261 -1 180 322 53 33 chr10 122691791 122691943 -22897345 - L2 LINE L2 -27 3286 3132 251 297 78 23 chr10 122694573 122694701 -22894587 - L2 LINE L2 0 3272 3138 24 0 0 0 chr10 122694933 122694957 -22894331 + AT_rich Low_complexity Low_complexity 1 24 0 2271 106 0 0 chr10 122694958 122695251 -22894037 - AluSx SINE Alu -14 298 6 1865 163 54 91 chr10 122695326 122695830 -22893458 - L1MB8 LINE L1 -13 6165 5681 322 248 29 44 chr10 122696013 122696150 -22893138 - MIR SINE MIR -70 192 58 203 250 0 18 chr10 122696350 122696406 -22892882 - MIR SINE MIR -139 123 69 3694 142 34 13 chr10 122696834 122697455 -22891833 - MER41B LTR ERV1 0 635 2 3870 136 61 28 chr10 122698045 122698749 -22890539 + LTR8A LTR ERV1 1 727 0 270 0 0 0 chr10 122699186 122699216 -22890072 + (CA)n Simple_repeat Simple_repeat 2 31 0 750 282 45 69 chr10 122699239 122699572 -22889716 - MER102b DNA MER1_type -6 335 11 475 327 91 0 chr10 122699718 122699883 -22889405 + MER5A DNA MER1_type 10 189 0 206 268 37 37 chr10 122700021 122700103 -22889185 + MER5A DNA MER1_type 1 82 -107 917 198 0 57 chr10 122700299 122700547 -22888741 + L1MC5 LINE L1 7696 7929 -32 244 283 38 28 chr10 122701054 122701160 -22888128 + L2 LINE L2 3128 3234 -38 995 266 112 21 chr10 122701246 122701629 -22887659 + LTR16B LTR ERVL 34 451 -13 197 301 30 47 chr10 122701868 122701974 -22887314 + MIR SINE MIR 75 177 -62 689 254 99 0 chr10 122702019 122702220 -22887068 - MER58A DNA MER1_type -3 221 1 306 255 0 32 chr10 122702287 122702381 -22886907 - MER117 DNA MER1_type -39 158 68 432 302 39 69 chr10 122703948 122704253 -22885035 + L2 LINE L2 3017 3312 -1 334 291 60 0 chr10 122704356 122704473 -22884815 - L2 LINE L2 0 3313 3190 3812 80 88 36 chr10 122704820 122705398 -22883890 - LTR14B LTR ERVK 0 608 1 189 282 64 13 chr10 122706630 122706708 -22882580 - L2 LINE L2 -4 3309 3228 1824 162 28 0 chr10 122706799 122707083 -22882205 + AluJo SINE Alu 3 294 -18 1959 147 6 6 chr10 122707086 122707398 -22881890 + AluSx SINE Alu 1 312 0 681 263 78 68 chr10 122707615 122708010 -22881278 - MLT1J LTR MaLR -19 492 94 280 131 16 16 chr10 122708706 122708767 -22880521 + GA-rich Low_complexity Low_complexity 2 62 0 249 83 0 0 chr10 122708761 122708797 -22880491 + (GGGA)n Simple_repeat Simple_repeat 3 38 0 * 702 163 11 33 chr10 122708809 122708993 -22880295 + GA-rich Low_complexity Low_complexity 1 180 0 362 254 116 71 chr10 122709534 122709888 -22879400 - L2 LINE L2 0 3313 2944 364 227 133 23 chr10 122710307 122710435 -22878853 - MER117 DNA MER1_type 0 197 56 190 342 110 31 chr10 122710496 122710724 -22878564 - L2 LINE L2 -200 3072 2827 2504 84 3 0 chr10 122712063 122712373 -22876915 + AluSx SINE Alu 1 311 -1 308 328 92 0 chr10 122712584 122712715 -22876573 - L2 LINE L2 -3 3269 3127 1433 138 8 46 chr10 122712889 122713149 -22876139 - AluSx SINE Alu -16 296 47 522 275 43 19 chr10 122713149 122713356 -22875932 - L2 LINE L2 -276 3037 2826 225 235 71 51 chr10 122713470 122713568 -22875720 - MIR3 SINE MIR -47 161 62 424 273 23 15 chr10 122714007 122714139 -22875149 - MER94 DNA DNA -1 133 1 6993 131 8 8 chr10 122715311 122717098 -22872190 - L1MA3 LINE L1 0 7724 5937 3694 83 12 47 chr10 122717099 122717678 -22871610 - L1MA3 LINE L1 -4427 3138 2580 5067 212 106 57 chr10 122717678 122719351 -22869937 - MER52A LTR ERV1 0 1755 1 11537 151 9 6 chr10 122719351 122721864 -22867424 - L1M1 LINE L1 -4982 2583 13 249 300 22 11 chr10 122721932 122722022 -22867266 - L2 LINE L2 -1 3312 3222 2066 153 40 15 chr10 122722031 122722430 -22866858 + L1MB8 LINE L1 5770 6178 0 827 151 0 0 chr10 122722554 122722680 -22866608 - FLAM_C SINE Alu -3 130 5 272 356 40 18 chr10 122722979 122723201 -22866087 - LTR16C LTR ERVL -8 483 257 1670 215 3 0 chr10 122723206 122723517 -22865771 - AluJb SINE Alu 0 312 1 518 274 132 0 chr10 122723967 122724171 -22865117 + MER112 DNA MER1_type 18 248 -12 234 286 126 8 chr10 122724392 122724511 -22864777 + L2 LINE L2 3136 3268 -4 2031 115 0 73 chr10 122724564 122724878 -22864410 - AluSg SINE Alu -19 291 1 267 299 205 0 chr10 122724940 122725067 -22864221 + MIR SINE MIR 35 187 -75 1638 210 40 8 chr10 122725214 122725586 -22863702 + MLT1C LTR MaLR 34 417 -50 296 290 29 14 chr10 122726353 122726491 -22862797 + MIR SINE MIR 116 255 -7 1850 109 0 4 chr10 122726561 122726808 -22862480 - AluSq SINE Alu -57 256 11 470 209 139 13 chr10 122726987 122727145 -22862143 + MER5B DNA MER1_type 1 178 0 250 330 38 19 chr10 122727599 122727705 -22861583 - MIR SINE MIR -85 123 16 2953 80 0 3 chr10 122727747 122728123 -22861165 + THE1C LTR MaLR 1 375 0 2483 123 35 81 chr10 122728189 122728369 -22860919 - LTR26 LTR ERV1 0 603 416 5082 32 3 0 chr10 122728369 122728956 -22860332 + L1PA3 LINE L1 5567 6155 0 2483 123 35 81 chr10 122728956 122729232 -22860056 - LTR26 LTR ERV1 -187 416 168 45114 36 2 4 chr10 122729232 122735394 -22853894 + L1PA4 LINE L1 4 6155 0 1220 103 23 0 chr10 122735402 122735576 -22853712 - LTR26 LTR ERV1 -421 182 5 2272 190 86 6 chr10 122735601 122736069 -22853219 + MLT1D LTR MaLR 1 505 0 340 259 37 46 chr10 122736254 122736362 -22852926 + MIR SINE MIR 8 114 -148 1444 221 16 44 chr10 122736370 122736771 -22852517 + MLT2C1 LTR ERVL 1 653 -10 334 219 149 9 chr10 122736775 122736889 -22852399 + MIR SINE MIR 133 262 0 414 238 43 12 chr10 122737207 122737331 -22851957 + MLT1H LTR MaLR 431 595 0 773 236 69 103 chr10 122737389 122738042 -22851246 + L1ME4a LINE L1 5485 6115 -6 537 273 32 23 chr10 122738375 122738595 -22850693 + L2 LINE L2 2812 3033 -280 4836 157 39 1 chr10 122738599 122739451 -22849837 + L1MB1 LINE L1 5278 6161 -28 287 313 45 45 chr10 122740085 122740283 -22849005 + MIR3 SINE MIR 8 205 -3 203 308 15 0 chr10 122740515 122740580 -22848708 + L2 LINE L2 3195 3260 -12 439 196 133 35 chr10 122740810 122740953 -22848335 - MIR SINE MIR -59 203 47 250 346 0 13 chr10 122742292 122742370 -22846918 + MIR SINE MIR 29 105 -103 546 233 67 31 chr10 122742762 122742975 -22846313 + MIR SINE MIR 17 233 -29 224 274 0 0 chr10 122743008 122743059 -22846229 + MIR3 SINE MIR 110 160 -48 1970 138 3 31 chr10 122743161 122743480 -22845808 + AluSx SINE Alu 1 310 -2 28 0 0 0 chr10 122743793 122743821 -22845467 + AT_rich Low_complexity Low_complexity 1 28 0 458 249 143 38 chr10 122744449 122744597 -22844691 - L1ME4a LINE L1 -15 6106 5922 315 0 0 0 chr10 122744597 122744632 -22844656 + (TG)n Simple_repeat Simple_repeat 2 36 0 458 249 143 38 chr10 122744632 122744720 -22844568 - L1ME4a LINE L1 -199 5922 5845 1555 159 87 0 chr10 122744760 122745012 -22844276 - AluSx SINE Alu -38 274 1 695 263 0 11 chr10 122745238 122745413 -22843875 - MIR SINE MIR -45 217 45 348 319 152 10 chr10 122745571 122745775 -22843513 + MIR SINE MIR 11 243 -19 362 316 139 0 chr10 122746507 122746665 -22842623 - Charlie8 DNA MER1_type -2237 180 1 292 261 65 22 chr10 122748321 122748459 -22840829 + L1ME4a LINE L1 5976 6119 -2 2516 60 0 7 chr10 122748960 122749258 -22840030 + AluY SINE Alu 1 296 -15 236 314 0 48 chr10 122749265 122749370 -22839918 - MIR SINE MIR -79 129 30 340 312 85 7 chr10 122750566 122750707 -22838581 - L2 LINE L2 -6 3266 3115 5775 207 43 18 chr10 122750791 122752209 -22837079 + Charlie1a DNA MER1_type 1 1454 -1 318 291 22 30 chr10 122752530 122752664 -22836624 + MIR SINE MIR 124 256 -6 206 158 26 0 chr10 122753124 122753162 -22836126 + MIR3 SINE MIR 151 189 -19 259 214 71 0 chr10 122754542 122754612 -22834676 + MIR SINE MIR 95 169 -93 857 286 172 12 chr10 122754680 122755023 -22834265 + MLT1J2 LTR MaLR 16 413 -37 237 132 0 0 chr10 122755026 122755064 -22834224 + (TCTA)n Simple_repeat Simple_repeat 4 41 0 2379 85 3 0 chr10 122756368 122756662 -22832626 - AluSq SINE Alu -18 295 1 560 277 103 13 chr10 122758503 122758727 -22830561 - MIR SINE MIR -14 248 5 385 289 72 12 chr10 122758885 122759051 -22830237 - MIR SINE MIR -59 203 28 2222 111 0 19 chr10 122759303 122759618 -22829670 + AluSx SINE Alu 1 309 -3 3828 36 0 0 chr10 122760022 122760468 -22828820 + L1PA7 LINE L1 5708 6153 -1 24 0 0 0 chr10 122760513 122760537 -22828751 + AT_rich Low_complexity Low_complexity 1 24 0 195 260 0 0 chr10 122760823 122760873 -22828415 - MIR SINE MIR -119 143 94 189 346 56 28 chr10 122763558 122763665 -22825623 - MIR SINE MIR -64 144 35 225 214 0 0 chr10 122763901 122763943 -22825345 + MIR3 SINE MIR 161 202 -6 2245 129 0 6 chr10 122764970 122765281 -22824007 + AluSq SINE Alu 1 309 -4 253 128 0 0 chr10 122765302 122765341 -22823947 - MIR3 SINE MIR -52 156 118 190 250 28 42 chr10 122765796 122765868 -22823420 - MIR3 SINE MIR -12 196 126 333 214 121 36 chr10 122765954 122766094 -22823194 - MIR3 SINE MIR -15 193 42 613 184 32 8 chr10 122766131 122766256 -22823032 + MER69A DNA AcHobo 49 176 -1 24 32 0 0 chr10 122766660 122766691 -22822597 + AT_rich Low_complexity Low_complexity 1 31 0 866 247 25 25 chr10 122767266 122767501 -22821787 + MIR SINE MIR 14 248 -14 644 309 257 7 chr10 122767707 122768283 -22821005 - L3 LINE CR1 -3 1574 855 1622 179 4 4 chr10 122768321 122768583 -22820705 + Tigger7 DNA MER2_type 6 267 -466 669 163 0 0 chr10 122768583 122768681 -22820607 + Tigger7 DNA MER2_type 2390 2487 0 2278 82 50 0 chr10 122769327 122769645 -22819643 - L1PA10 LINE L1 -3 6165 5832 1300 92 0 62 chr10 122769646 122769896 -22819392 + L1PA10 LINE L1 5607 5813 -347 222 211 115 58 chr10 122770049 122770153 -22819135 - MIR SINE MIR -65 143 34 2602 65 0 0 chr10 122770187 122770495 -22818793 + AluY SINE Alu 1 308 -3 1978 143 7 29 chr10 122770768 122771076 -22818212 - AluSx SINE Alu -11 301 1 954 226 71 80 chr10 122771090 122771580 -22817708 + L2 LINE L2 2809 3294 -19 543 206 37 15 chr10 122772562 122772698 -22816590 - MIR SINE MIR -21 241 103 231 167 0 0 chr10 122772711 122772753 -22816535 + (TG)n Simple_repeat Simple_repeat 1 42 0 660 271 26 31 chr10 122773617 122773846 -22815442 - MIR SINE MIR -5 257 30 183 183 50 67 chr10 122774278 122774338 -22814950 + MER5A DNA MER1_type 89 147 -42 764 196 111 20 chr10 122775451 122775650 -22813638 - MER20 DNA MER1_type -1 218 2 360 268 39 20 chr10 122775715 122775868 -22813420 - L1ME4a LINE L1 -11 6110 5955 23 0 0 0 chr10 122775908 122775931 -22813357 + AT_rich Low_complexity Low_complexity 1 23 0 199 233 78 108 chr10 122776137 122776266 -22813022 + MIR SINE MIR 68 192 -70 217 289 26 13 chr10 122777079 122777155 -22812133 + MER5A DNA MER1_type 111 187 -2 2368 80 3 0 chr10 122778213 122778681 -22810607 + AluSq SINE Alu 1 469 0 180 0 0 0 chr10 122778681 122778701 -22810587 + (GGAA)n Simple_repeat Simple_repeat 1 20 0 257 360 32 0 chr10 122778733 122778858 -22810430 - L2 LINE L2 -10 3262 3134 1374 100 20 88 chr10 122778925 122779175 -22810113 + MER46A DNA MER2_type 4 236 0 1208 201 49 73 chr10 122779324 122779473 -22809815 + MER58B DNA MER1_type 6 157 -2263 2006 113 57 0 chr10 122779473 122779756 -22809532 + AluSq SINE Alu 1 299 -14 1208 201 49 73 chr10 122779756 122779950 -22809338 + MER58B DNA MER1_type 157 341 0 1650 148 122 0 chr10 122780065 122780343 -22808945 - AluSx SINE Alu 0 312 1 478 272 66 26 chr10 122780801 122781010 -22808278 + MIR SINE MIR 47 262 0 209 262 10 78 chr10 122780978 122781081 -22808207 - L2 LINE L2 -11 3261 3166 * 204 267 26 103 chr10 122781121 122781237 -22808051 - L2 LINE L2 -245 3068 2962 2527 78 0 10 chr10 122783481 122783788 -22805500 - AluY SINE Alu -7 304 1 186 333 0 0 chr10 122784244 122784373 -22804915 + (TG)n Simple_repeat Simple_repeat 2 130 0 696 83 0 0 chr10 122784786 122784882 -22804406 + (TGGA)n Simple_repeat Simple_repeat 4 99 0 345 328 116 0 chr10 122786893 122787082 -22802206 - MIR SINE MIR 0 262 52 214 205 0 0 chr10 122787256 122787295 -22801993 + A-rich Low_complexity Low_complexity 1 39 0 2098 93 65 0 chr10 122788088 122788366 -22800922 + AluSq SINE Alu 2 297 -16 1139 222 10 0 chr10 122788641 122788848 -22800440 + MER58A DNA MER1_type 9 217 -7 1895 122 35 3 chr10 122788848 122788971 -22800317 + AluSx SINE Alu 1 119 -193 477 0 0 0 chr10 122788971 122789024 -22800264 + (CA)n Simple_repeat Simple_repeat 2 54 0 1895 122 35 3 chr10 122789024 122789187 -22800101 + AluSx SINE Alu 119 296 -16 543 225 155 7 chr10 122789897 122790039 -22799249 - MER45A DNA AcHobo -4 174 12 1902 128 17 3 chr10 122790133 122790431 -22798857 - AluSq SINE Alu -11 302 1 187 103 51 0 chr10 122791210 122791249 -22798039 + (TA)n Simple_repeat Simple_repeat 2 42 0 406 261 19 75 chr10 122793983 122794144 -22795144 + MIR SINE MIR 103 254 -8 225 275 75 25 chr10 122794270 122794350 -22794938 - MIR3 SINE MIR -30 178 95 453 174 0 10 chr10 122794422 122794520 -22794768 + L1MA7 LINE L1 6185 6281 -10 1989 132 0 10 chr10 122794530 122794834 -22794454 - AluSx SINE Alu -11 301 1 30 45 0 0 chr10 122794841 122794885 -22794403 + AT_rich Low_complexity Low_complexity 1 44 0 1875 149 0 0 chr10 122794943 122795232 -22794056 + AluSx SINE Alu 1 289 -23 347 375 13 0 chr10 122795459 122795611 -22793677 + MER117 DNA MER1_type 4 157 -40 214 317 33 0 chr10 122795677 122795737 -22793551 + L2 LINE L2 3197 3258 -14 212 253 13 114 chr10 122796478 122796557 -22792731 + MIR SINE MIR 24 94 -168 246 284 156 0 chr10 122796732 122796873 -22792415 + MIR SINE MIR 99 261 -1 2116 97 0 33 chr10 122797580 122797880 -22791408 + AluSx SINE Alu 1 290 -22 308 274 133 9 chr10 122798110 122798223 -22791065 + MIR SINE MIR 65 191 -71 1898 129 0 41 chr10 122798428 122798747 -22790541 + AluSx SINE Alu 1 307 0 292 355 16 16 chr10 122799282 122799406 -22789882 + MIR3 SINE MIR 43 166 -42 892 132 103 29 chr10 122799731 122799905 -22789383 + MER5A DNA MER1_type 3 189 0 1891 143 0 13 chr10 122800123 122800423 -22788865 + AluSx SINE Alu 1 296 -16 1370 208 21 0 chr10 122800437 122800726 -22788562 + AluJb SINE Alu 1 295 -17 810 171 57 6 chr10 122800805 122800963 -22788325 + AluJb SINE Alu 141 306 -6 1939 139 3 3 chr10 122800964 122801265 -22788023 + AluSx SINE Alu 1 301 -11 2160 162 101 50 chr10 122801397 122801940 -22787348 + pTR5 LTR ERV1 743 1313 -1125 * 5806 121 251 81 chr10 122801920 122803370 -22785918 + pTR5 LTR ERV1 743 2438 0 4708 154 87 61 chr10 122803373 122804470 -22784818 + pTR5 LTR ERV1 65 2401 -37 221 327 75 19 chr10 122804550 122804657 -22784631 + MIR3 SINE MIR 73 185 -23 1584 94 156 51 chr10 122804748 122805023 -22784265 + AluSg SINE Alu 1 304 -6 1779 55 0 0 chr10 122805064 122805282 -22784006 - AluY SINE Alu -8 303 86 318 370 65 25 chr10 122806478 122806678 -22782610 - MIR SINE MIR -28 234 27 1946 134 20 0 chr10 122809049 122809355 -22779933 + AluSx SINE Alu 1 312 0 2122 104 6 25 chr10 122810078 122810396 -22778892 - AluSx SINE Alu 0 312 1 2365 85 0 0 chr10 122810972 122811278 -22778010 + AluSq SINE Alu 1 306 -7 280 296 134 41 chr10 122811434 122811606 -22777682 - MIR SINE MIR -13 249 62 1467 154 39 59 chr10 122812613 122812919 -22776369 - AluJb SINE Alu -12 300 1 235 302 94 28 chr10 122813117 122813223 -22776065 + L2 LINE L2 3155 3267 -5 2155 90 17 10 chr10 122813235 122813534 -22775754 + AluSx SINE Alu 1 301 -11 1549 102 0 0 chr10 122813536 122813742 -22775546 + AluSg SINE Alu 1 206 -104 213 255 0 21 chr10 122813943 122813990 -22775298 + L2 LINE L2 3246 3291 -22 1361 164 0 106 chr10 122814838 122815179 -22774109 + AluJo SINE Alu 3 307 -5 351 260 121 70 chr10 122815705 122815762 -22773526 + L2 LINE L2 3021 3074 -239 2067 108 27 3 chr10 122815762 122816059 -22773229 + AluSx SINE Alu 3 306 -6 351 260 121 70 chr10 122816059 122816274 -22773014 + L2 LINE L2 3074 3307 -6 1572 175 0 31 chr10 122816339 122816665 -22772623 - AluJb SINE Alu 0 317 1 388 297 61 20 chr10 122816714 122816942 -22772346 - L1MC4a LINE L1 -181 5940 5700 661 260 115 10 chr10 122816979 122817187 -22772101 - MIR SINE MIR -29 233 4 350 272 131 42 chr10 122817370 122817561 -22771727 - L1MC4a LINE L1 -2346 5462 5255 22 0 0 0 chr10 122817633 122817655 -22771633 + AT_rich Low_complexity Low_complexity 1 22 0 269 256 23 45 chr10 122817764 122817897 -22771391 - L1P LINE L1 -1111 5035 4906 2329 99 0 0 chr10 122818030 122818342 -22770946 - AluSx SINE Alu 0 312 1 504 291 138 60 chr10 122818351 122818782 -22770506 - L1MC4a LINE L1 -1390 4756 4264 2127 108 0 3 chr10 122819777 122820083 -22769205 - AluSx SINE Alu -2 310 6 600 330 95 34 chr10 122820406 122820794 -22768494 - L2 LINE L2 -1 3312 2901 216 362 52 9 chr10 122821638 122821754 -22767534 + MIR3 SINE MIR 79 199 -9 865 137 0 0 chr10 122821797 122821921 -22767367 + FLAM_C SINE Alu 3 126 -7 4217 180 65 9 chr10 122821948 122822493 -22766795 + L1MB5 LINE L1 5175 5813 -361 483 18 0 0 chr10 122822493 122822549 -22766739 + (TAGA)n Simple_repeat Simple_repeat 1 56 0 4217 180 65 9 chr10 122822549 122822927 -22766361 + L1MB5 LINE L1 5813 6168 -6 1873 112 39 3 chr10 122822945 122823231 -22766057 + AluSx SINE Alu 1 296 -16 304 274 113 54 chr10 122823547 122823733 -22765555 + Charlie8 DNA MER1_type 33 229 -2188 853 145 0 0 chr10 122824042 122824173 -22765115 + AluJb SINE Alu 5 135 -177 1698 155 0 37 chr10 122824173 122824308 -22764980 + AluJb SINE Alu 1 139 -173 2324 84 0 0 chr10 122824308 122824606 -22764682 + AluY SINE Alu 1 298 -13 1698 155 0 37 chr10 122824606 122824766 -22764522 + AluJb SINE Alu 139 285 -27 374 287 153 0 chr10 122825680 122825837 -22763451 + MIR SINE MIR 82 262 0 240 111 0 0 chr10 122826650 122826686 -22762602 + (TG)n Simple_repeat Simple_repeat 2 37 0 1882 149 7 0 chr10 122827523 122827825 -22761463 - AluSx SINE Alu -8 304 1 1037 197 118 14 chr10 122828052 122828341 -22760947 + MER33 DNA MER1_type 6 324 0 811 142 0 4 chr10 122828362 122828580 -22760708 + AluSx SINE Alu 2 306 -6 351 281 180 7 chr10 122828920 122829059 -22760229 - MIR SINE MIR -8 254 92 2109 109 10 0 chr10 122829578 122829880 -22759408 - AluSx SINE Alu -7 305 1 244 267 0 0 chr10 122830920 122830980 -22758308 - MIR SINE MIR -113 149 90 21 0 0 0 chr10 122831940 122831961 -22757327 + AT_rich Low_complexity Low_complexity 1 21 0 307 295 42 11 chr10 122832181 122832276 -22757012 - L1MC4 LINE L1 -1332 6710 6613 * 329 296 23 0 chr10 122832193 122832281 -22757007 + L1MC4 LINE L1 6614 6703 -1339 336 301 0 21 chr10 122832470 122832563 -22756725 + L1MC4 LINE L1 6616 6706 -1336 324 183 14 42 chr10 122832501 122832572 -22756716 - L1MC4 LINE L1 -1338 6704 6636 * 435 297 158 13 chr10 122832572 122832875 -22756413 - L1ME4a LINE L1 -293 5828 5482 329 275 140 29 chr10 122833223 122833394 -22755894 - MIR SINE MIR -14 248 59 533 303 51 6 chr10 122833685 122833863 -22755425 - MER5A DNA MER1_type 0 189 4 204 289 0 0 chr10 122834264 122834316 -22754972 + (CAT)n Simple_repeat Simple_repeat 2 53 0 671 296 0 39 chr10 122834347 122834553 -22754735 - MIR SINE MIR -36 226 29 189 216 118 0 chr10 122834563 122834614 -22754674 - MIR SINE MIR -116 146 90 1866 134 35 3 chr10 122835452 122835742 -22753546 - AluSx SINE Alu -7 305 7 1979 113 3 16 chr10 122836004 122836348 -22752940 + AluY SINE Alu 1 311 0 592 245 191 15 chr10 122837029 122837233 -22752055 + MIR SINE MIR 13 252 -10 834 272 29 8 chr10 122838036 122838282 -22751006 + MIR SINE MIR 12 262 0 226 287 20 40 chr10 122838328 122838429 -22750859 + L2 LINE L2 2881 2979 -293 233 281 0 16 chr10 122838658 122838722 -22750566 + L2 LINE L2 3029 3091 -222 332 176 40 54 chr10 122838795 122838869 -22750419 + L2 LINE L2 3223 3295 -18 1850 155 3 13 chr10 122838897 122839207 -22750081 + AluSx SINE Alu 1 307 -5 505 279 43 31 chr10 122839906 122840094 -22749194 - MIR SINE MIR -59 203 15 319 305 35 84 chr10 122840387 122840590 -22748698 - MIR SINE MIR -34 228 36 3058 152 87 100 chr10 122840712 122841796 -22747492 - LTR12 LTR ERV1 -23 1481 5 244 169 0 31 chr10 122842644 122842709 -22746579 + (TA)n Simple_repeat Simple_repeat 1 63 0 532 303 12 18 chr10 122843487 122843652 -22745636 + MIR SINE MIR 28 191 -71 1487 182 17 30 chr10 122843683 122843979 -22745309 - AluJo SINE Alu -20 292 1 212 103 0 0 chr10 122844414 122844443 -22744845 + L2 LINE L2 3258 3286 -27 410 304 27 61 chr10 122844482 122844583 -22744705 - MIR SINE MIR -19 243 140 2296 78 0 0 chr10 122844583 122844876 -22744412 - AluSg SINE Alu -17 293 1 410 304 27 61 chr10 122844876 122845009 -22744279 - MIR SINE MIR -122 140 20 261 258 174 15 chr10 122845923 122845988 -22743300 + MIR SINE MIR 104 157 -105 903 228 60 12 chr10 122845988 122846238 -22743050 - MIR SINE MIR 0 262 1 261 258 174 15 chr10 122846238 122846304 -22742984 + MIR SINE MIR 157 256 -6 797 182 0 0 chr10 122846305 122846437 -22742851 - FLAM_C SINE Alu -1 132 1 228 268 149 64 chr10 122847218 122847453 -22741835 + MIR SINE MIR 2 256 -6 255 260 244 5 chr10 122847692 122847872 -22741416 - Charlie8 DNA MER1_type -1000 1417 107 1988 121 7 0 chr10 122848902 122849184 -22740104 - AluSx SINE Alu -26 286 3 912 137 46 119 chr10 122849857 122850076 -22739212 - MER20 DNA MER1_type -16 203 1 375 297 110 7 chr10 122850791 122850936 -22738352 + MIR3 SINE MIR 37 196 -12 2172 98 0 19 chr10 122850995 122851311 -22737977 - AluSq SINE Alu -3 310 1 325 282 0 12 chr10 122851933 122852018 -22737270 - MIR SINE MIR -163 99 16 296 153 321 2 chr10 122852097 122852180 -22737108 + MIR SINE MIR 39 143 -65 431 229 164 50 chr10 122852518 122852634 -22736654 - MER5A DNA MER1_type -1 188 52 2321 69 0 0 chr10 122852634 122852925 -22736363 + AluY SINE Alu 1 291 -20 431 229 164 50 chr10 122852925 122852948 -22736340 - MER5A DNA MER1_type -137 52 33 1037 179 61 0 chr10 122852965 122853161 -22736127 + MER3 DNA MER1_type 2 209 0 213 292 73 21 chr10 122854234 122854330 -22734958 - MIR SINE MIR -12 250 150 494 269 57 0 chr10 122854361 122854502 -22734786 - MIR SINE MIR -103 159 11 482 290 135 0 chr10 122854532 122854732 -22734556 + MIR SINE MIR 1 227 -35 637 260 106 5 chr10 122855466 122855674 -22733614 + MIR SINE MIR 33 261 -1 732 268 47 20 chr10 122856898 122857152 -22732136 - MIR SINE MIR 0 262 2 324 295 9 36 chr10 122857732 122857844 -22731444 + MIR3 SINE MIR 70 178 -30 230 325 61 35 chr10 122858904 122859018 -22730270 - L2 LINE L2 -11 3261 3145 649 240 168 0 chr10 122859148 122859327 -22729961 + MIR SINE MIR 52 260 -2 1217 181 81 3 chr10 122859430 122859728 -22729560 + MER33 DNA MER1_type 1 321 -3 397 261 153 40 chr10 122859755 122859931 -22729357 - MIR SINE MIR -64 198 3 3506 131 6 17 chr10 122860047 122860565 -22728723 - MER41E LTR ERV1 0 512 1 1817 147 3 19 chr10 122861267 122861581 -22727707 - AluSq SINE Alu 0 313 5 2399 77 0 0 chr10 122861589 122861889 -22727399 - AluSg SINE Alu -10 300 1 2779 159 43 72 chr10 122861996 122862535 -22726753 - LTR9 LTR ERV1 0 612 92 1344 203 47 88 chr10 122862535 122863003 -22726285 - LTR7 LTR ERV1 0 450 2 2779 159 43 72 chr10 122863003 122863084 -22726204 - LTR9 LTR ERV1 -520 92 10 2138 106 10 0 chr10 122863085 122863387 -22725901 - AluSg SINE Alu -5 305 1 349 257 35 62 chr10 122864847 122864960 -22724328 + MER5B DNA MER1_type 80 178 0 1193 143 147 45 chr10 122865205 122865471 -22723817 + AluJo SINE Alu 5 297 -5 23 33 0 0 chr10 122865482 122865512 -22723776 + AT_rich Low_complexity Low_complexity 1 30 0 2076 116 0 7 chr10 122865513 122865816 -22723472 - AluSx SINE Alu -11 301 1 296 298 38 23 chr10 122865914 122865933 -22723355 - L1ME4a LINE L1 -30 6091 6074 1214 153 7 84 chr10 122865933 122866154 -22723134 + L1MB5 LINE L1 5922 6120 -54 1693 133 20 31 chr10 122866154 122866318 -22722970 - AluSx SINE Alu -21 291 130 2023 120 3 0 chr10 122866318 122866641 -22722647 - AluSp SINE Alu 0 313 2 1693 133 20 31 chr10 122866641 122866770 -22722518 - AluSx SINE Alu -182 130 1 1214 153 7 84 chr10 122866770 122866822 -22722466 + L1MB5 LINE L1 6120 6174 0 296 298 38 23 chr10 122866822 122866933 -22722355 - L1ME4a LINE L1 -47 6074 5959 26 82 0 0 chr10 122867313 122867374 -22721914 + AT_rich Low_complexity Low_complexity 1 61 0 25 65 0 0 chr10 122867402 122867448 -22721840 + AT_rich Low_complexity Low_complexity 1 46 0 599 248 32 6 chr10 122867514 122867671 -22721617 + L2 LINE L2 2679 2839 -475 1318 231 123 51 chr10 122867673 122868144 -22721144 - MLT1D LTR MaLR 0 505 1 596 183 16 24 chr10 122868206 122868332 -22720956 + L1MB5 LINE L1 5933 6057 -117 248 330 18 36 chr10 122868337 122868449 -22720839 + L2 LINE L2 2907 3016 -297 470 220 40 0 chr10 122868705 122868805 -22720483 - MER5B DNA MER1_type -56 122 19 862 202 81 6 chr10 122869465 122869638 -22719650 - MER5A DNA MER1_type -3 186 1 831 196 37 6 chr10 122869642 122869805 -22719483 + MER5A DNA MER1_type 4 171 -18 2017 115 11 0 chr10 122870105 122870391 -22718897 - AluSx SINE Alu -18 294 6 6705 191 66 43 chr10 122870485 122870952 -22718336 - L1MC3 LINE L1 -148 7637 7182 1533 132 100 0 chr10 122870952 122871232 -22718056 + AluJb SINE Alu 1 308 -4 6705 191 66 43 chr10 122871232 122872441 -22716847 - L1MC3 LINE L1 -603 7182 5923 624 194 37 50 chr10 122872439 122872563 -22716725 - L1MC3 LINE L1 -934 6851 6768 * 1756 106 0 4 chr10 122872563 122872818 -22716470 + AluSc SINE Alu 56 309 0 624 194 37 50 chr10 122872818 122872893 -22716395 - L1MC3 LINE L1 -1017 6768 6694 961 263 5 9 chr10 122873809 122874033 -22715255 - MER58A DNA MER1_type 0 224 2 189 0 0 0 chr10 122874187 122874208 -22715080 + (CA)n Simple_repeat Simple_repeat 1 21 0 2227 105 0 3 chr10 122874664 122874970 -22714318 - AluSq SINE Alu -8 305 1 238 290 32 16 chr10 122875429 122875553 -22713735 + L1ME4a LINE L1 5927 6052 -69 2791 6 0 0 chr10 122875554 122875865 -22713423 - AluYa5 SINE Alu 0 311 1 2232 101 0 0 chr10 122875897 122876205 -22713083 - AluSx SINE Alu -4 308 1 350 286 127 48 chr10 122876650 122876839 -22712449 + MIR SINE MIR 1 204 -58 338 337 128 10 chr10 122877252 122877448 -22711840 - MIR SINE MIR -4 258 40 1201 185 9 124 chr10 122877805 122877983 -22711305 - AluJo SINE Alu -20 292 168 2257 100 0 3 chr10 122877983 122878293 -22710995 - AluSg1 SINE Alu 0 309 1 1201 185 9 124 chr10 122878293 122878444 -22710844 - AluJo SINE Alu -144 168 1 1222 100 6 11 chr10 122878643 122878823 -22710465 + AluSg/x SINE Alu 125 303 -9 242 320 32 103 chr10 122878890 122879046 -22710242 + MER5A DNA MER1_type 44 188 -1 1136 41 35 12 chr10 122879335 122879346 -22709942 + (TTTC)n Simple_repeat Simple_repeat 1 184 0 1136 41 35 12 chr10 122879346 122879515 -22709773 + (TTTC)n Simple_repeat Simple_repeat 1 173 0 1725 155 14 7 chr10 122879564 122879854 -22709434 - AluJb SINE Alu -20 292 1 270 254 415 0 chr10 122879880 122880022 -22709266 + MIR SINE MIR 62 262 0 412 322 113 68 chr10 122880757 122880871 -22708417 + L1ME LINE L1 5353 5460 -661 2118 110 7 0 chr10 122880871 122881172 -22708116 - AluSp SINE Alu -10 303 1 412 322 113 68 chr10 122881172 122881439 -22707849 + L1ME LINE L1 5460 5751 -370 310 188 146 31 chr10 122881606 122881702 -22707586 + HAL1b LINE L1 1197 1303 -45 768 146 54 0 chr10 122882934 122883064 -22706224 + Tigger2 DNA MER2_type 2518 2654 -64 475 168 116 11 chr10 122883230 122883325 -22705963 - Tigger2 DNA MER2_type -10 2708 2604 2135 99 0 62 chr10 122883446 122883726 -22705562 - THE1A LTR MaLR -52 303 43 2178 99 0 0 chr10 122883726 122884033 -22705255 - AluSc SINE Alu 0 307 1 2135 99 0 62 chr10 122884033 122884074 -22705214 - THE1A LTR MaLR -312 43 1 1078 63 0 0 chr10 122884074 122884201 -22705087 - THE1C LTR MaLR -248 127 1 1596 169 0 0 chr10 122884552 122884847 -22704441 + AluJb SINE Alu 25 319 0 186 43 0 0 chr10 122885102 122885125 -22704163 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 733 291 87 9 chr10 122886447 122886677 -22702611 + MIR SINE MIR 12 259 -3 303 28 0 0 chr10 122888124 122888160 -22701128 + (CA)n Simple_repeat Simple_repeat 2 37 0 398 193 96 54 chr10 122889203 122889376 -22699912 + MER104 DNA Tc2 36 169 -11 2229 113 3 7 chr10 122889957 122890266 -22699022 + AluSx SINE Alu 2 309 -3 529 311 36 16 chr10 122890401 122890594 -22698694 - MIR SINE MIR -33 229 33 332 190 58 74 chr10 122890596 122890717 -22698571 - L1MC5 LINE L1 -727 7234 7116 589 211 52 100 chr10 122890721 122890862 -22698426 - L1MC5 LINE L1 -907 7054 6933 2035 108 4 11 chr10 122890862 122891140 -22698148 - AluSx SINE Alu -6 306 31 589 211 52 100 chr10 122891140 122891287 -22698001 - L1MC5 LINE L1 -1028 6933 6780 281 261 11 23 chr10 122891539 122891627 -22697661 - AluSq/x SINE Alu -185 117 31 409 260 47 27 chr10 122891666 122891816 -22697472 - L1MC4 LINE L1 -1072 6970 6818 2005 51 0 0 chr10 122892191 122892428 -22696860 - AluY SINE Alu -3 308 72 2682 49 0 0 chr10 122893190 122893497 -22695791 + AluY SINE Alu 1 307 -4 310 282 14 0 chr10 122893498 122893569 -22695719 + MER5A DNA MER1_type 68 139 -50 189 0 0 0 chr10 122894203 122894224 -22695064 + (A)n Simple_repeat Simple_repeat 1 21 0 2260 111 0 0 chr10 122894227 122894524 -22694764 + AluSx SINE Alu 1 297 -15 378 224 64 83 chr10 122894659 122894815 -22694473 - MIR SINE MIR 0 262 110 2733 133 20 47 chr10 122895224 122895305 -22693983 - Tigger2a DNA MER2_type -2275 433 351 2467 63 3 3 chr10 122895305 122895608 -22693680 + AluY SINE Alu 1 303 -8 2733 133 20 47 chr10 122895608 122895971 -22693317 - Tigger2a DNA MER2_type -2357 351 1 326 291 126 52 chr10 122896048 122896107 -22693181 - L1MC4 LINE L1 -2156 5652 5599 243 0 0 0 chr10 122896107 122896134 -22693154 + (TG)n Simple_repeat Simple_repeat 2 28 0 326 291 126 52 chr10 122896134 122896304 -22692984 - L1MC4 LINE L1 -2209 5599 5406 1394 170 13 8 chr10 122896440 122896675 -22692613 - MER46A DNA MER2_type 0 236 1 858 285 14 0 chr10 122897324 122897545 -22691743 + MER58A DNA MER1_type 1 224 0 2390 98 0 13 chr10 122897709 122898024 -22691264 - AluSx SINE Alu -1 311 1 2115 95 3 14 chr10 122898145 122898460 -22690828 - AluSx SINE Alu 0 316 5 1957 95 20 0 chr10 122899621 122899874 -22689414 + AluSx SINE Alu 44 301 -11 2679 52 0 0 chr10 122899910 122900219 -22689069 + AluY SINE Alu 1 309 -2 225 0 0 0 chr10 122900219 122900244 -22689044 + (TA)n Simple_repeat Simple_repeat 2 26 0 228 358 0 25 chr10 122900244 122900325 -22688963 + MIR SINE MIR 31 109 -99 742 202 0 0 chr10 122900372 122900491 -22688797 - FLAM_C SINE Alu -19 124 6 797 193 0 0 chr10 122900843 122900962 -22688326 + FLAM_C SINE Alu 1 119 -24 180 0 0 0 chr10 122900962 122900982 -22688306 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 21 36 0 0 chr10 122902585 122902613 -22686675 + AT_rich Low_complexity Low_complexity 1 28 0 636 238 24 37 chr10 122905462 122905514 -22683774 - MER5B DNA MER1_type -5 173 122 2158 98 0 3 chr10 122905514 122905801 -22683487 + AluY SINE Alu 26 311 0 636 238 24 37 chr10 122905801 122905912 -22683376 - MER5B DNA MER1_type -56 122 12 400 316 57 38 chr10 122906228 122906437 -22682851 + L2 LINE L2 2824 3036 -277 323 140 0 0 chr10 122906757 122906814 -22682474 - MER52A LTR ERV1 0 1755 1699 * 678 200 112 16 chr10 122906812 122907084 -22682204 - MER52A LTR ERV1 -1191 564 203 2318 116 0 0 chr10 122908311 122908613 -22680675 - AluSx SINE Alu -10 302 1 619 266 110 25 chr10 122908812 122909049 -22680239 + MIR SINE MIR 6 262 0 903 218 10 20 chr10 122909770 122909967 -22679321 + MER3 DNA MER1_type 15 209 0 231 271 0 0 chr10 122909924 122909972 -22679316 - MER3 DNA MER1_type -119 90 43 * 206 197 49 49 chr10 122912066 122912127 -22677161 + (CATATA)n Simple_repeat Simple_repeat 4 64 0 418 330 122 17 chr10 122912948 122913178 -22676110 - L2 LINE L2 -194 3078 2825 2230 113 0 3 chr10 122913193 122913493 -22675795 + AluSx SINE Alu 2 300 -12 4521 197 114 35 chr10 122913550 122914693 -22674595 + Charlie1a DNA MER1_type 1 1233 -222 251 228 333 8 chr10 122915453 122915576 -22673712 - MIR SINE MIR -87 175 13 533 151 0 12 chr10 122916117 122916226 -22673062 + AluSg/x SINE Alu 210 310 0 314 250 97 0 chr10 122916243 122916315 -22672973 + L2 LINE L2 3194 3272 0 2387 104 0 0 chr10 122916350 122916659 -22672629 + AluSg1 SINE Alu 1 309 0 656 176 0 0 chr10 122916880 122916988 -22672300 + MIR SINE MIR 151 258 -4 23 33 0 0 chr10 122916999 122917029 -22672259 + AT_rich Low_complexity Low_complexity 1 30 0 231 207 0 52 chr10 122917054 122917112 -22672176 + MIR SINE MIR 83 137 -71 219 342 0 26 chr10 122917144 122917258 -22672030 + MIR SINE MIR 82 192 -70 2118 105 3 7 chr10 122917825 122918144 -22671144 - AluSg SINE Alu 0 310 1 613 230 32 0 chr10 122918435 122918561 -22670727 + Charlie8 DNA MER1_type 24 153 -2264 269 307 34 51 chr10 122921191 122921367 -22667921 + L2 LINE L2 2866 3038 -234 437 262 189 0 chr10 122921521 122921643 -22667645 - MER5A DNA MER1_type 0 189 45 180 0 0 0 chr10 122922680 122922700 -22666588 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 300 318 85 0 chr10 122922959 122923088 -22666200 - MIR3 SINE MIR -34 174 35 350 248 60 34 chr10 122924656 122924773 -22664515 + MIR SINE MIR 20 139 -123 785 88 0 0 chr10 122924954 122925056 -22664232 + AluSp/q SINE Alu 203 304 -9 266 266 73 32 chr10 122925058 122925182 -22664106 + MIR SINE MIR 84 212 -50 213 358 0 15 chr10 122925370 122925437 -22663851 + L2 LINE L2 3122 3187 -85 2238 98 10 7 chr10 122926471 122926776 -22662512 + AluSp SINE Alu 1 306 -7 1444 143 40 8 chr10 122928273 122928525 -22660763 - AluJb SINE Alu -52 260 1 513 306 87 29 chr10 122929437 122929679 -22659609 + MIR SINE MIR 5 260 -2 268 178 0 0 chr10 122930188 122930233 -22659055 + MER3 DNA MER1_type 73 117 -92 * 527 124 0 174 chr10 122930230 122930408 -22658880 + MER3 DNA MER1_type 2429 2575 0 219 173 37 12 chr10 122930528 122930609 -22658679 + G-rich Low_complexity Low_complexity 1 83 0 285 240 30 10 chr10 122930635 122930735 -22658553 + GA-rich Low_complexity Low_complexity 1 102 0 2267 102 3 0 chr10 122931245 122931540 -22657748 + AluSc SINE Alu 1 296 -13 5430 165 68 75 chr10 122931700 122932303 -22656985 - L1MC3 LINE L1 0 7785 7179 245 247 65 26 chr10 122932303 122932380 -22656908 - MLT1F1 LTR MaLR -442 125 46 5430 165 68 75 chr10 122932380 122932987 -22656301 - L1MC3 LINE L1 -606 7179 6508 1605 162 0 26 chr10 122933308 122933574 -22655714 + AluJo SINE Alu 40 298 -14 364 337 65 10 chr10 122933721 122933920 -22655368 + MIR SINE MIR 1 210 -52 339 317 0 0 chr10 122934505 122934650 -22654638 + (CA)n Simple_repeat Simple_repeat 1 145 0 186 208 0 0 chr10 122934764 122934812 -22654476 + (CA)n Simple_repeat Simple_repeat 2 49 0 538 231 191 14 chr10 122934888 122935035 -22654253 - MER5A DNA MER1_type -8 181 9 23 33 0 0 chr10 122935162 122935192 -22654096 + AT_rich Low_complexity Low_complexity 1 30 0 677 329 94 7 chr10 122935548 122935978 -22653310 + L2 LINE L2 2606 3073 -240 1506 153 122 0 chr10 122936130 122936385 -22652903 + AluSq SINE Alu 1 286 -27 6620 46 2 3 chr10 122936385 122937845 -22651443 + L1PA5 LINE L1 4587 6045 -109 599 226 37 12 chr10 122937845 122938009 -22651279 + MIR SINE MIR 92 259 -3 501 175 0 0 chr10 122938643 122938746 -22650542 + CT-rich Low_complexity Low_complexity 4 106 0 223 318 68 61 chr10 122939056 122939188 -22650100 - L2 LINE L2 0 3272 3140 2135 129 3 7 chr10 122939192 122939502 -22649786 + AluSx SINE Alu 1 309 -3 278 255 10 39 chr10 122939997 122940099 -22649189 + LTR67 LTR ERVL 457 555 -2 583 294 118 43 chr10 122940642 122941226 -22648062 - L2 LINE L2 -1003 2311 1684 25 0 0 0 chr10 122941683 122941708 -22647580 + AT_rich Low_complexity Low_complexity 1 25 0 2282 109 0 3 chr10 122941708 122942019 -22647269 - AluSg SINE Alu 0 310 1 266 273 128 101 chr10 122942134 122942562 -22646726 - MLT1K LTR MaLR 0 588 149 215 302 40 80 chr10 122942939 122943099 -22646189 - MIR SINE MIR -19 189 32 23 54 0 0 chr10 122943501 122943538 -22645750 + AT_rich Low_complexity Low_complexity 1 37 0 218 389 9 0 chr10 122943888 122943996 -22645292 - MIR SINE MIR -3 259 151 1060 256 35 88 chr10 122943996 122944484 -22644804 - LTR40c LTR ERVL 0 462 1 377 362 7 13 chr10 122944484 122944636 -22644652 - MIR SINE MIR -107 155 5 1761 179 10 3 chr10 122944767 122945069 -22644219 - AluSx SINE Alu -8 304 1 1008 106 0 0 chr10 122945071 122945203 -22644085 - AluSq/x SINE Alu -181 132 1 2196 96 0 0 chr10 122945950 122946278 -22643010 - AluSx SINE Alu 0 328 1 745 309 63 5 chr10 122946392 122946615 -22642673 - MIR SINE MIR -21 241 6 1952 126 3 14 chr10 122947041 122947351 -22641937 - AluSx SINE Alu 0 307 1 185 220 100 0 chr10 122947383 122947433 -22641855 + L2 LINE L2 3217 3271 -1 3266 127 13 24 chr10 122948392 122948943 -22640345 + L1MB2 LINE L1 5625 6169 -2 22 0 0 0 chr10 122949464 122949486 -22639802 + AT_rich Low_complexity Low_complexity 1 22 0 2035 166 38 0 chr10 122949799 122950172 -22639116 - MLT1B LTR MaLR -1 389 3 1407 119 50 0 chr10 122950418 122950637 -22638651 + MER30 DNA MER1_type 1 230 0 490 217 49 84 chr10 122950876 122951079 -22638209 - L2 LINE L2 -5 3308 3113 379 261 76 25 chr10 122951142 122951299 -22637989 - L2 LINE L2 -449 2865 2701 1096 183 0 54 chr10 122952297 122952538 -22636750 - MER106A DNA MER1_type -8 228 1 637 325 48 21 chr10 122952809 122953227 -22636061 - L1MEc LINE L1 -5931 465 37 376 246 60 15 chr10 122953341 122953475 -22635813 - LTR48 LTR ERV1 -40 747 608 916 172 47 170 chr10 122953512 122953648 -22635640 - LTR49 LTR ERV1 -255 340 189 2000 105 19 54 chr10 122953648 122953963 -22635325 + AluSx SINE Alu 2 305 -7 916 172 47 170 chr10 122953963 122954238 -22635050 - LTR49 LTR ERV1 -406 189 1 189 0 0 0 chr10 122954420 122954441 -22634847 + (T)n Simple_repeat Simple_repeat 1 21 0 203 313 88 0 chr10 122954517 122954597 -22634691 - MIR3 SINE MIR -41 167 81 243 239 80 0 chr10 122956183 122956271 -22633017 - L1ME4a LINE L1 -6 6115 6021 2376 86 0 10 chr10 122956368 122956671 -22632617 - AluSc SINE Alu -6 303 4 302 273 198 8 chr10 122956693 122956935 -22632353 - L1ME4a LINE L1 -248 5873 5586 266 215 31 0 chr10 122957049 122957114 -22632174 - MIR SINE MIR -48 214 148 2192 67 42 14 chr10 122957332 122957616 -22631672 - AluY SINE Alu -18 293 2 1884 167 0 3 chr10 122957715 122958021 -22631267 - AluJo SINE Alu -7 305 1 324 286 39 45 chr10 122961521 122961675 -22627613 + MIR SINE MIR 87 239 -23 228 93 0 74 chr10 122961968 122962022 -22627266 + (TTATA)n Simple_repeat Simple_repeat 4 53 0 2480 69 0 0 chr10 122962151 122962455 -22626833 + AluSc SINE Alu 1 304 -5 2591 180 99 28 chr10 122962527 122963195 -22626093 + LTR48 LTR ERV1 26 740 -47 260 273 0 0 chr10 122963775 122963830 -22625458 + (TG)n Simple_repeat Simple_repeat 2 56 0 244 311 126 8 chr10 122963848 122963967 -22625321 - L2 LINE L2 -223 3049 2917 614 246 47 23 chr10 122964036 122964207 -22625081 - MER5B DNA MER1_type -3 175 1 22 0 0 0 chr10 122964397 122964419 -22624869 + AT_rich Low_complexity Low_complexity 1 22 0 1119 171 23 18 chr10 122966796 122967013 -22622275 - MER20 DNA MER1_type 0 219 2 478 327 62 6 chr10 122967372 122967534 -22621754 + MIR3 SINE MIR 3 173 -35 2410 70 6 10 chr10 122968263 122968576 -22620712 + AluSq SINE Alu 1 312 -1 462 257 19 52 chr10 122969468 122969646 -22619642 + MIR SINE MIR 4 173 -65 1910 155 0 0 chr10 122970397 122970688 -22618600 - AluSx SINE Alu -21 291 1 379 176 10 108 chr10 122972233 122972284 -22617004 + MIR3 SINE MIR 109 147 -61 661 227 21 52 chr10 122972284 122972478 -22616810 - MER5A DNA MER1_type 0 189 2 379 176 10 108 chr10 122972478 122972528 -22616760 + MIR3 SINE MIR 147 200 -8 22 0 0 0 chr10 122973874 122973896 -22615392 + AT_rich Low_complexity Low_complexity 1 22 0 672 289 46 16 chr10 122974538 122974732 -22614556 + MIR3 SINE MIR 2 201 -7 1494 182 19 16 chr10 122974748 122975056 -22614232 - MER33 DNA MER1_type 0 324 16 914 171 28 17 chr10 122975170 122975346 -22613942 - MER5B DNA MER1_type 0 178 1 1966 120 48 3 chr10 122975772 122976063 -22613225 + AluSc SINE Alu 1 304 -5 542 260 57 41 chr10 122976063 122976309 -22612979 - L1MB7 LINE L1 -16 6870 6621 4112 224 100 21 chr10 122976312 122977719 -22611569 - L1MB7 LINE L1 -1555 5293 3775 251 246 35 0 chr10 122977744 122977801 -22611487 + CT-rich Low_complexity Low_complexity 3 61 0 2030 105 0 18 chr10 122977801 122978078 -22611210 - AluSx SINE Alu -40 272 1 216 0 0 0 chr10 122978499 122978523 -22610765 + (T)n Simple_repeat Simple_repeat 1 24 0 232 257 62 18 chr10 122978549 122978662 -22610626 - L1MC4 LINE L1 0 8042 7925 714 290 70 103 chr10 122978704 122979342 -22609946 - L2 LINE L2 -837 2477 1861 605 83 28 56 chr10 122979378 122979486 -22609802 + AluJb SINE Alu 1 105 -207 213 234 0 0 chr10 122979492 122979539 -22609749 + T-rich Low_complexity Low_complexity 4 50 0 308 266 140 89 chr10 122979689 122980038 -22609250 - L1MB7 LINE L1 -5941 908 542 804 91 9 0 chr10 122980160 122980270 -22609018 + AluSg/x SINE Alu 184 294 -18 2221 112 0 0 chr10 122980723 122981018 -22608270 + AluSx SINE Alu 1 295 -17 813 225 37 37 chr10 122981056 122981274 -22608014 + MIR SINE MIR 45 262 0 234 333 62 0 chr10 122981924 122982005 -22607283 + MIR3 SINE MIR 122 207 -1 22 0 0 0 chr10 122982222 122982244 -22607044 + AT_rich Low_complexity Low_complexity 1 22 0 561 300 135 74 chr10 122982877 122983580 -22605708 + L2 LINE L2 1864 2609 -705 2139 101 19 13 chr10 122983842 122984149 -22605139 + AluSc SINE Alu 1 309 0 440 257 170 9 chr10 122984159 122984377 -22604911 + MER102a DNA MER1_type 77 329 -1 289 318 137 75 chr10 122984444 122984869 -22604419 + L2 LINE L2 2821 3271 -1 21 0 0 0 chr10 122984964 122984985 -22604303 + AT_rich Low_complexity Low_complexity 1 21 0 1931 159 0 19 chr10 122985712 122986021 -22603267 - AluJb SINE Alu -9 303 1 2074 168 49 0 chr10 122986677 122987087 -22602201 - L1MA4 LINE L1 -2 6298 5869 1049 270 111 64 chr10 122987881 122988614 -22600674 - L1MC4a LINE L1 -1689 6914 6148 555 292 37 16 chr10 122989003 122989246 -22600042 - L1MC4a LINE L1 -1822 5119 4872 1133 163 0 0 chr10 122989365 122989531 -22599757 - AluJb SINE Alu -16 296 131 939 157 6 12 chr10 122989653 122989717 -22599571 + Tigger7 DNA MER2_type 2422 2485 -102 1663 154 122 6 chr10 122989717 122990029 -22599259 - MER7A DNA MER2_type 0 346 1 939 157 6 12 chr10 122990029 122990130 -22599158 + Tigger7 DNA MER2_type 2485 2586 -1 767 291 128 27 chr10 122990137 122990614 -22598674 - L1MC4a LINE L1 -4308 2814 2290 565 285 77 29 chr10 122991514 122991788 -22597500 - L1MC4a LINE L1 -6118 305 19 267 328 109 16 chr10 122992250 122992378 -22596910 - MIR SINE MIR -70 192 53 198 325 36 12 chr10 122992946 122993029 -22596259 - MIR SINE MIR -177 85 1 411 314 109 14 chr10 122993289 122993499 -22595789 + L3b LINE CR1 1113 1342 -241 191 239 0 22 chr10 122993631 122993677 -22595611 + L3 LINE CR1 1528 1572 -5 1388 206 14 10 chr10 122994042 122994327 -22594961 + AluJo SINE Alu 3 289 -18 207 0 0 0 chr10 122994327 122994350 -22594938 + (CCA)n Simple_repeat Simple_repeat 3 25 0 359 261 27 0 chr10 122994778 122994889 -22594399 - L1MC4 LINE L1 0 8042 7929 11592 175 29 7 chr10 122994902 122994933 -22594355 - L1MA4A LINE L1 -24 6279 6250 2160 88 20 7 chr10 122994933 122995229 -22594059 - AluSc SINE Alu -9 300 1 11592 175 29 7 chr10 122995229 122998390 -22590898 - L1MA4A LINE L1 -53 6250 2942 23 92 0 0 chr10 122998694 122998759 -22590529 + AT_rich Low_complexity Low_complexity 1 65 0 25 31 0 0 chr10 122999048 122999080 -22590208 + AT_rich Low_complexity Low_complexity 1 32 0 492 285 166 48 chr10 123000618 123001113 -22588175 - L2 LINE L2 -798 2516 1964 795 158 79 16 chr10 123001117 123001321 -22587967 + L1MC3 LINE L1 6914 7097 -688 246 254 0 15 chr10 123001321 123001388 -22587900 + MLT1F1 LTR MaLR 35 100 -467 2606 148 51 2 chr10 123001388 123001842 -22587446 + L1MC3 LINE L1 7178 7653 -132 357 186 0 0 chr10 123002014 123002084 -22587204 + (TA)n Simple_repeat Simple_repeat 1 70 0 210 291 31 55 chr10 123002115 123002242 -22587046 - L2 LINE L2 -1616 1698 1575 217 344 93 26 chr10 123003050 123003201 -22586087 + MIR3 SINE MIR 2 162 -46 243 0 0 0 chr10 123004036 123004063 -22585225 + (TG)n Simple_repeat Simple_repeat 2 28 0 234 0 0 0 chr10 123004062 123004088 -22585200 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 26 30 0 0 chr10 123004279 123004312 -22584976 + AT_rich Low_complexity Low_complexity 1 33 0 264 314 57 29 chr10 123004725 123004865 -22584423 - L1ME LINE L1 -486 5635 5492 428 216 78 10 chr10 123004943 123005045 -22584243 - MIR SINE MIR -72 190 82 201 254 0 34 chr10 123008866 123008925 -22580363 + MIR SINE MIR 17 73 -135 553 169 275 6 chr10 123009009 123009169 -22580119 + MER105 DNA DNA 1 203 -1 230 244 0 0 chr10 123009829 123009874 -22579414 + (CA)n Simple_repeat Simple_repeat 1 45 0 333 47 0 0 chr10 123011111 123011154 -22578134 + (TAA)n Simple_repeat Simple_repeat 2 44 0 369 0 0 0 chr10 123014478 123014519 -22574769 + (CA)n Simple_repeat Simple_repeat 1 41 0 189 175 0 0 chr10 123014893 123014933 -22574355 + A-rich Low_complexity Low_complexity 1 40 0 22 0 0 0 chr10 123018501 123018523 -22570765 + AT_rich Low_complexity Low_complexity 1 22 0 31 0 0 0 chr10 123019982 123020013 -22569275 + AT_rich Low_complexity Low_complexity 1 31 0 277 224 0 61 chr10 123020651 123020749 -22568539 - L1MC4 LINE L1 -1337 6705 6614 456 299 126 0 chr10 123023022 123023196 -22566092 + MIR SINE MIR 11 206 -56 22 0 0 0 chr10 123023226 123023248 -22566040 + AT_rich Low_complexity Low_complexity 1 22 0 387 289 26 46 chr10 123024691 123024843 -22564445 + MIR SINE MIR 68 216 -46 189 107 0 0 chr10 123025010 123025038 -22564250 + (AATAG)n Simple_repeat Simple_repeat 3 30 0 518 179 0 60 chr10 123025666 123025800 -22563488 + FLAM_C SINE Alu 1 126 -17 1727 172 3 14 chr10 123026388 123026679 -22562609 + AluJb SINE Alu 1 288 -24 2184 96 0 4 chr10 123026686 123026997 -22562291 + AluSx SINE Alu 3 312 0 216 156 44 0 chr10 123027222 123027267 -22562021 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 201 306 0 0 chr10 123028309 123028371 -22560917 + CT-rich Low_complexity Low_complexity 1 62 0 180 162 108 0 chr10 123028390 123028427 -22560861 - L2 LINE L2 -9 3304 3264 201 271 47 24 chr10 123028663 123028748 -22560540 - L2 LINE L2 -1 3312 3226 21 0 0 0 chr10 123029988 123030009 -22559279 + AT_rich Low_complexity Low_complexity 1 21 0 2399 62 0 3 chr10 123030351 123030659 -22558629 + AluY SINE Alu 1 307 -4 587 280 110 30 chr10 123032605 123032841 -22556447 + MIR SINE MIR 2 256 -6 674 296 156 36 chr10 123032847 123033285 -22556003 - MLT1J2 LTR MaLR 0 450 5 1542 160 51 3 chr10 123033666 123033959 -22555329 + L1MC3 LINE L1 7479 7785 0 27 29 0 0 chr10 123034040 123034074 -22555214 + AT_rich Low_complexity Low_complexity 1 34 0 460 280 169 5 chr10 123039727 123039934 -22549354 + L2 LINE L2 2985 3225 -88 2429 60 0 7 chr10 123039987 123040286 -22549002 - AluSc SINE Alu -12 297 1 24 0 0 0 chr10 123040457 123040481 -22548807 + AT_rich Low_complexity Low_complexity 1 24 0 29 60 0 0 chr10 123044815 123044865 -22544423 + AT_rich Low_complexity Low_complexity 1 50 0 28 0 0 0 chr10 123045404 123045432 -22543856 + AT_rich Low_complexity Low_complexity 1 28 0 1809 157 7 0 chr10 123046446 123046732 -22542556 - AluJb SINE Alu -24 288 1 2269 80 0 11 chr10 123047641 123047927 -22541361 + AluSq SINE Alu 13 295 -18 2001 137 3 0 chr10 123048277 123048570 -22540718 + AluSx SINE Alu 1 294 -18 449 245 31 0 chr10 123048690 123048788 -22540500 - MIR SINE MIR -71 191 91 338 375 0 31 chr10 123049116 123049276 -22540012 + MER5A DNA MER1_type 35 189 0 21 0 0 0 chr10 123049993 123050014 -22539274 + AT_rich Low_complexity Low_complexity 1 21 0 510 190 141 0 chr10 123050268 123050389 -22538899 - MIR SINE MIR -1 261 124 400 272 85 47 chr10 123050403 123050609 -22538679 - MIR SINE MIR -6 256 35 3962 161 21 12 chr10 123050832 123051557 -22537731 + L1PA16 LINE L1 5433 6163 -3 432 208 146 15 chr10 123051558 123051688 -22537600 + MIR SINE MIR 11 157 -105 2585 42 0 3 chr10 123051961 123052268 -22537020 + AluY SINE Alu 1 306 -5 235 191 0 0 chr10 123053237 123053284 -22536004 + MLT1K LTR MaLR 519 565 -23 184 267 44 0 chr10 123053782 123053827 -22535461 - MER5C DNA MER1_type -276 48 2 408 295 42 20 chr10 123053890 123054073 -22535215 + MIR SINE MIR 16 209 -53 400 276 41 16 chr10 123054348 123054471 -22534817 - MIR3 SINE MIR -37 171 46 412 268 106 0 chr10 123054475 123054598 -22534690 + L2 LINE L2 3176 3311 -2 2472 61 0 0 chr10 123055414 123055724 -22533564 - AluY SINE Alu -1 310 1 231 268 28 14 chr10 123055781 123055852 -22533436 - L2 LINE L2 0 3272 3201 540 287 33 37 chr10 123056189 123056433 -22532855 + MER112 DNA MER1_type 1 243 -17 673 143 192 44 chr10 123056521 123056703 -22532585 - MLT1A2 LTR MaLR -165 209 1 22 56 0 0 chr10 123057150 123057186 -22532102 + AT_rich Low_complexity Low_complexity 1 36 0 309 252 45 36 chr10 123057297 123057408 -22531880 + MIR SINE MIR 80 191 -71 313 355 77 64 chr10 123057468 123058001 -22531287 - L2 LINE L2 -575 2739 2200 1971 214 133 9 chr10 123058194 123058824 -22530464 + HsTC2a DNA Tc2 1 708 -36 848 141 0 15 chr10 123058824 123058959 -22530329 + FLAM_C SINE Alu 1 133 0 432 278 65 17 chr10 123060441 123060839 -22528449 + LTR33 LTR ERVL 52 510 -11 491 261 43 37 chr10 123060848 123061009 -22528279 + MIR SINE MIR 88 249 -13 224 29 0 29 chr10 123061010 123061044 -22528244 + (ATG)n Simple_repeat Simple_repeat 1 33 0 1392 223 47 11 chr10 123061419 123061778 -22527510 - MLT1A2 LTR MaLR 0 374 3 316 227 0 0 chr10 123061783 123061858 -22527430 - MLT1A2-int LTR MaLR -4 1731 1657 21 36 0 0 chr10 123062190 123062218 -22527070 + AT_rich Low_complexity Low_complexity 1 28 0 461 309 46 6 chr10 123064059 123064234 -22525054 - MIR SINE MIR -17 245 64 195 42 0 0 chr10 123065064 123065088 -22524200 + (T)n Simple_repeat Simple_repeat 1 24 0 198 0 0 0 chr10 123068423 123068445 -22520843 + (T)n Simple_repeat Simple_repeat 1 22 0 1774 136 40 67 chr10 123068570 123068944 -22520344 + THE1B LTR MaLR 1 364 0 777 250 109 0 chr10 123069012 123069232 -22520056 - MIR SINE MIR -1 261 18 258 156 0 0 chr10 123069710 123069755 -22519533 + (TAGA)n Simple_repeat Simple_repeat 4 48 0 1758 162 43 20 chr10 123069815 123070118 -22519170 + AluJb SINE Alu 1 310 -2 2122 145 0 0 chr10 123070223 123070527 -22518761 + AluSx SINE Alu 1 304 -8 2325 75 0 0 chr10 123070643 123070923 -22518365 + AluY SINE Alu 1 280 -31 180 0 0 0 chr10 123070923 123070943 -22518345 + (CA)n Simple_repeat Simple_repeat 1 20 0 2420 236 18 10 chr10 123071141 123071760 -22517528 + MLT1E2 LTR MaLR 3 626 0 206 310 23 23 chr10 123071769 123071856 -22517432 + L2 LINE L2 2962 3048 -224 325 314 48 43 chr10 123072369 123072557 -22516731 + L3b LINE CR1 1178 1366 -217 688 243 59 6 chr10 123072558 123072727 -22516561 + MER5B DNA MER1_type 1 178 0 301 198 56 40 chr10 123072930 123073056 -22516232 - L1ME4a LINE L1 -3 6118 5991 1377 86 0 0 chr10 123073133 123073308 -22515980 - AluY SINE Alu -4 307 133 2311 69 13 7 chr10 123073308 123073611 -22515677 - AluY SINE Alu -6 305 1 10379 24 1 1 chr10 123073727 123075726 -22513562 + L1PA3 LINE L1 4151 6151 -4 602 302 57 19 chr10 123075727 123076042 -22513246 - L1ME4a LINE L1 -232 5889 5563 2280 97 3 3 chr10 123076613 123076922 -22512366 - AluSp SINE Alu -4 309 1 748 165 181 0 chr10 123076965 123077098 -22512190 + FAM SINE Alu 1 157 -18 2659 26 0 0 chr10 123077098 123077401 -22511887 - AluY SINE Alu -8 303 1 196 300 0 0 chr10 123077463 123077513 -22511775 + MIR SINE MIR 199 248 -14 1876 177 7 0 chr10 123078984 123079283 -22510005 - AluJo SINE Alu -11 301 1 22 0 0 0 chr10 123079341 123079363 -22509925 + AT_rich Low_complexity Low_complexity 1 22 0 387 339 23 8 chr10 123079384 123079514 -22509774 - MIR SINE MIR -98 164 33 889 247 204 18 chr10 123079618 123080189 -22509099 + L2 LINE L2 2627 3313 0 294 291 40 166 chr10 123080280 123080654 -22508634 - L2 LINE L2 -29 3243 2917 25 31 0 0 chr10 123080821 123080853 -22508435 + AT_rich Low_complexity Low_complexity 1 32 0 741 242 88 46 chr10 123083547 123083787 -22505501 + MIR SINE MIR 9 258 -4 2503 71 3 3 chr10 123085418 123085729 -22503559 - AluSp SINE Alu -2 311 1 212 365 39 19 chr10 123085911 123086015 -22503273 + L2 LINE L2 3156 3261 -11 489 224 79 59 chr10 123086320 123086409 -22502879 - MIR SINE MIR -50 212 117 2344 107 0 0 chr10 123086409 123086709 -22502579 + AluSx SINE Alu 1 300 -12 489 224 79 59 chr10 123086709 123086771 -22502517 - MIR SINE MIR -145 117 58 451 328 17 35 chr10 123086786 123086960 -22502328 + L2 LINE L2 3097 3267 -5 1655 214 73 62 chr10 123086983 123087517 -22501771 - MLT1F LTR MaLR -2 540 1 203 100 0 50 chr10 123087667 123087707 -22501581 + (CATA)n Simple_repeat Simple_repeat 3 40 0 284 317 12 0 chr10 123089814 123089896 -22499392 - L3 LINE CR1 -1 1576 1494 2513 40 0 10 chr10 123090039 123090338 -22498950 + AluY SINE Alu 1 296 -15 2441 79 0 0 chr10 123091142 123091445 -22497843 - AluY SINE Alu -8 303 1 1793 172 0 35 chr10 123091809 123092128 -22497160 - AluJo SINE Alu -4 308 1 769 311 43 87 chr10 123094863 123095385 -22493903 - L2 LINE L2 -5 3267 2758 234 333 0 0 chr10 123095676 123095748 -22493540 + (CATATA)n Simple_repeat Simple_repeat 5 76 0 954 284 93 27 chr10 123095802 123096877 -22492411 + L1MEd LINE L1 561 1734 -4576 22 35 0 0 chr10 123096891 123096920 -22492368 + AT_rich Low_complexity Low_complexity 1 29 0 320 233 129 0 chr10 123097158 123097274 -22492014 + L1M4 LINE L1 4313 4443 -1703 2226 113 3 0 chr10 123097277 123097578 -22491710 + AluSx SINE Alu 1 302 -10 493 226 137 6 chr10 123097590 123097758 -22491530 + MIR SINE MIR 65 254 -8 201 39 0 0 chr10 123097766 123097792 -22491496 + (CAT)n Simple_repeat Simple_repeat 3 28 0 329 0 24 0 chr10 123097889 123097930 -22491358 + (TA)n Simple_repeat Simple_repeat 1 42 0 216 0 0 0 chr10 123097929 123097953 -22491335 + (GA)n Simple_repeat Simple_repeat 2 25 0 * 362 284 60 17 chr10 123099640 123099756 -22489532 - L2 LINE L2 -5 3267 3147 2442 90 3 0 chr10 123099913 123100225 -22489063 + AluSq SINE Alu 1 313 0 244 236 79 22 chr10 123100623 123100712 -22488576 - MER103 DNA DNA -3 163 70 316 252 160 0 chr10 123100865 123100984 -22488304 - MIR SINE MIR -76 186 49 209 83 28 0 chr10 123101394 123101430 -22487858 + (GA)n Simple_repeat Simple_repeat 1 37 0 26 30 0 0 chr10 123101815 123101848 -22487440 + AT_rich Low_complexity Low_complexity 1 33 0 22 70 0 0 chr10 123103923 123103966 -22485322 + AT_rich Low_complexity Low_complexity 1 43 0 1880 178 0 3 chr10 123104219 123104517 -22484771 + AluJb SINE Alu 1 297 -15 1895 95 0 18 chr10 123104698 123104760 -22484528 + L1PB1 LINE L1 5841 5903 -248 2357 86 0 7 chr10 123104760 123105063 -22484225 + AluSq SINE Alu 1 301 -12 1895 95 0 18 chr10 123105063 123105284 -22484004 + L1PB1 LINE L1 5903 6119 -32 256 289 67 11 chr10 123105561 123105651 -22483637 - MIR SINE MIR -56 152 58 202 114 29 0 chr10 123105984 123106019 -22483269 + GA-rich Low_complexity Low_complexity 3 38 0 29 28 0 0 chr10 123106224 123106260 -22483028 + AT_rich Low_complexity Low_complexity 1 36 0 203 182 0 23 chr10 123106431 123106475 -22482813 + L2 LINE L2 3261 3303 -10 256 345 86 14 chr10 123106500 123106639 -22482649 + MER5A DNA MER1_type 8 156 -33 210 324 0 0 chr10 123107012 123107086 -22482202 + (TA)n Simple_repeat Simple_repeat 1 74 0 735 316 85 3 chr10 123107092 123107409 -22481879 - L2 LINE L2 -2 3311 2969 286 261 74 18 chr10 123107476 123107703 -22481585 - L1MC4a LINE L1 -298 5823 5675 25 0 0 0 chr10 123108186 123108211 -22481077 + AT_rich Low_complexity Low_complexity 1 25 0 380 191 0 45 chr10 123108216 123108305 -22480983 - L1ME4a LINE L1 -94 6027 5943 501 345 36 1 chr10 123109849 123110058 -22479230 - MIR SINE MIR -37 225 12 2402 70 0 23 chr10 123110244 123110545 -22478743 + AluSq SINE Alu 1 294 -19 1930 188 11 0 chr10 123110657 123111019 -22478269 - L1MB5 LINE L1 -2 6172 5807 306 227 125 11 chr10 123111032 123111120 -22478168 + MIR SINE MIR 50 147 -61 538 270 78 8 chr10 123111496 123111781 -22477507 + MER20B DNA MER1_type 16 352 -431 735 306 79 10 chr10 123111810 123112114 -22477174 - MLT1I LTR MaLR -10 399 75 771 213 34 72 chr10 123112153 123112416 -22476872 + MER20B DNA MER1_type 422 674 -109 768 87 0 0 chr10 123112444 123112547 -22476741 + AluSg SINE Alu 1 103 -207 257 316 38 8 chr10 123112686 123112819 -22476469 - MIR SINE MIR -5 257 121 504 32 0 0 chr10 123113891 123113953 -22475335 + (CA)n Simple_repeat Simple_repeat 2 63 0 366 379 91 17 chr10 123114527 123114825 -22474463 - L2 LINE L2 -36 3236 2917 230 269 0 0 chr10 123115007 123115059 -22474229 - L2 LINE L2 -665 2649 2598 276 277 71 21 chr10 123115365 123115506 -22473782 - L2 LINE L2 -1096 2218 2071 2280 92 0 20 chr10 123115848 123116151 -22473137 + AluSc SINE Alu 1 297 -12 2037 95 32 11 chr10 123116791 123117074 -22472214 + AluSc SINE Alu 1 289 -20 21 0 0 0 chr10 123117962 123117983 -22471305 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr10 123118135 123118159 -22471129 + AT_rich Low_complexity Low_complexity 1 24 0 24 32 0 0 chr10 123118247 123118278 -22471010 + AT_rich Low_complexity Low_complexity 1 31 0 234 246 43 29 chr10 123119336 123119405 -22469883 + MIR SINE MIR 84 153 -109 204 40 0 0 chr10 123122013 123122038 -22467250 + (TG)n Simple_repeat Simple_repeat 1 25 0 214 324 153 27 chr10 123122040 123122151 -22467137 - L2 LINE L2 -22 3250 3126 1988 126 3 49 chr10 123122377 123122703 -22466585 - AluSq SINE Alu -2 311 1 243 217 0 0 chr10 123124549 123124595 -22464693 + L2 LINE L2 3224 3269 -3 250 295 174 27 chr10 123124982 123125131 -22464157 + MIR3 SINE MIR 28 198 -10 2064 94 52 10 chr10 123125927 123126215 -22463073 - AluSq SINE Alu -13 300 1 2094 145 0 6 chr10 123127163 123127474 -22461814 - AluSq SINE Alu -4 309 1 21 0 0 0 chr10 123128103 123128124 -22461164 + AT_rich Low_complexity Low_complexity 1 21 0 182 318 35 35 chr10 123128829 123128914 -22460374 - L2 LINE L2 -16 3297 3213 6836 134 50 9 chr10 123129018 123130200 -22459088 - Tigger3b DNA MER2_type -1 1230 1 2161 113 0 7 chr10 123130721 123131013 -22458275 - AluSc SINE Alu -19 290 1 24 53 0 0 chr10 123131073 123131111 -22458177 + AT_rich Low_complexity Low_complexity 1 38 0 1893 156 0 20 chr10 123131843 123132144 -22457144 + AluJb SINE Alu 1 295 -17 229 65 0 65 chr10 123132145 123132191 -22457097 + (GGAA)n Simple_repeat Simple_repeat 1 43 0 2645 78 2 78 chr10 123132281 123132689 -22456599 - MER51B LTR ERV1 0 377 1 707 210 37 6 chr10 123132934 123133096 -22456192 + MIR SINE MIR 88 254 -8 2037 81 50 3 chr10 123133880 123134185 -22455103 - AluY SINE Alu 0 311 1 379 218 0 0 chr10 123134367 123134445 -22454843 - MER58A DNA MER1_type -28 79 2 647 177 0 92 chr10 123134454 123134618 -22454670 + MER5A DNA MER1_type 1 149 -40 193 333 38 38 chr10 123135247 123135352 -22453936 + MER5A DNA MER1_type 85 189 0 1371 146 121 50 chr10 123135792 123136073 -22453215 - AluJo SINE Alu -11 301 1 1981 153 77 20 chr10 123136184 123136589 -22452699 + MSTA LTR MaLR 1 428 0 21 71 0 0 chr10 123136793 123136835 -22452453 + AT_rich Low_complexity Low_complexity 1 42 0 839 186 22 35 chr10 123136975 123137206 -22452082 + L1M4 LINE L1 4959 5186 -960 210 37 0 0 chr10 123137208 123137235 -22452053 + (TG)n Simple_repeat Simple_repeat 2 28 0 205 289 0 107 chr10 123137360 123137481 -22451807 + MIR SINE MIR 30 137 -71 1733 182 7 3 chr10 123137489 123137791 -22451497 - AluJo SINE Alu -9 303 1 216 376 40 24 chr10 123137893 123138018 -22451270 - L2 LINE L2 -5 3267 3141 902 269 23 43 chr10 123138029 123138375 -22450913 - MER102b DNA MER1_type -1 340 2 225 159 0 0 chr10 123139093 123139137 -22450151 + (CA)n Simple_repeat Simple_repeat 2 45 0 2178 79 4 4 chr10 123139500 123139802 -22449486 - AluSc SINE Alu 0 302 1 411 268 21 0 chr10 123139813 123139910 -22449378 - MIR3 SINE MIR -18 190 92 794 153 47 0 chr10 123139990 123140140 -22449148 + MER3 DNA MER1_type 39 195 -14 326 268 43 14 chr10 123140178 123140316 -22448972 - L1MCc LINE L1 -4352 2770 2629 1915 124 0 7 chr10 123140370 123140667 -22448621 - AluSx SINE Alu 0 312 21 1039 128 7 7 chr10 123140671 123140819 -22448469 - AluSq/x SINE Alu -164 148 1 1179 283 62 35 chr10 123140821 123141169 -22448119 - L1MCc LINE L1 -4577 2545 2208 2156 121 3 16 chr10 123141169 123141476 -22447812 - AluSx SINE Alu -9 303 1 1179 283 62 35 chr10 123141476 123142159 -22447129 - L1MCc LINE L1 -4914 2208 1273 261 0 0 0 chr10 123142327 123142356 -22446932 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 23 0 0 0 chr10 123143785 123143808 -22445480 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr10 123144370 123144391 -22444897 + AT_rich Low_complexity Low_complexity 1 21 0 379 250 83 17 chr10 123145866 123145986 -22443302 + L2 LINE L2 3179 3306 -7 679 256 91 52 chr10 123146212 123146442 -22442846 - MIR SINE MIR -6 256 18 21 0 0 0 chr10 123150946 123150967 -22438321 + AT_rich Low_complexity Low_complexity 1 21 0 189 171 0 0 chr10 123151259 123151294 -22437994 + CT-rich Low_complexity Low_complexity 2 36 0 209 171 0 0 chr10 123152087 123152122 -22437166 + (TG)n Simple_repeat Simple_repeat 2 36 0 1927 146 19 16 chr10 123152439 123152748 -22436540 + AluSx SINE Alu 1 310 -2 227 261 0 0 chr10 123152849 123152895 -22436393 + (CACG)n Simple_repeat Simple_repeat 1 46 0 460 305 39 16 chr10 123154061 123154229 -22435059 - MIR SINE MIR -55 153 39 277 339 28 18 chr10 123154594 123154703 -22434585 - MIR SINE MIR -30 232 123 288 247 86 12 chr10 123155034 123155115 -22434173 - L3b LINE CR1 -138 1445 1359 782 211 63 16 chr10 123155245 123155435 -22433853 + MIR SINE MIR 61 259 -3 27 29 0 0 chr10 123155585 123155619 -22433669 + AT_rich Low_complexity Low_complexity 1 34 0 363 272 69 52 chr10 123156132 123156305 -22432983 - MLT1K LTR MaLR 0 588 413 265 319 32 0 chr10 123156544 123156638 -22432650 - MLT1K LTR MaLR -485 103 7 21 57 0 0 chr10 123158384 123158419 -22430869 + AT_rich Low_complexity Low_complexity 1 35 0 343 324 110 36 chr10 123159661 123159880 -22429408 - MIR SINE MIR -11 251 17 1618 194 9 29 chr10 123160470 123160785 -22428503 - AluJo SINE Alu -3 309 1 701 187 58 7 chr10 123160806 123160961 -22428327 + MER58 DNA MER1_type 1 163 -178 367 273 45 9 chr10 123162620 123162730 -22426558 - L2 LINE L2 0 3313 3200 22 35 0 0 chr10 123162934 123162963 -22426325 + AT_rich Low_complexity Low_complexity 1 29 0 2183 102 7 0 chr10 123163166 123163461 -22425827 + AluSq SINE Alu 1 297 -16 263 265 245 0 chr10 123163508 123163704 -22425584 - L1ME4a LINE L1 -82 6039 5796 468 314 87 87 chr10 123163830 123163842 -22425446 - HAL1b LINE L1 -644 704 693 2332 96 0 7 chr10 123163842 123164143 -22425145 - AluSg SINE Alu -11 299 1 468 314 87 87 chr10 123164143 123164764 -22424524 - HAL1b LINE L1 -654 694 71 2650 48 0 0 chr10 123166626 123166936 -22422352 - AluY SINE Alu 0 311 2 2402 98 0 0 chr10 123167353 123167658 -22421630 - AluSx SINE Alu -7 305 1 2208 118 10 0 chr10 123167918 123168096 -22421192 - AluSq SINE Alu -5 308 124 189 0 0 0 chr10 123168096 123168117 -22421171 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 2208 118 10 0 chr10 123168117 123168243 -22421045 - AluSq SINE Alu -189 124 1 274 263 0 13 chr10 123169085 123169161 -22420127 + MER102b DNA MER1_type 1 75 -266 2862 205 17 12 chr10 123169168 123169818 -22419470 - L1ME1 LINE L1 -15 6151 5499 243 306 92 0 chr10 123169843 123169941 -22419347 + MER102b DNA MER1_type 231 337 -4 425 294 118 42 chr10 123169973 123170211 -22419077 + MIR SINE MIR 5 260 -2 195 225 14 145 chr10 123170249 123170387 -22418901 - MER5A DNA MER1_type -19 170 51 1730 150 34 8 chr10 123170401 123170714 -22418574 + AluSx SINE Alu 12 331 0 398 273 0 0 chr10 123170777 123170854 -22418434 + MIR SINE MIR 42 118 -90 209 313 162 10 chr10 123171601 123171700 -22417588 + L3b LINE CR1 1468 1581 -2 380 244 87 31 chr10 123172266 123172393 -22416895 + L2 LINE L2 3136 3269 -3 2141 126 0 0 chr10 123172669 123172985 -22416303 + AluSq SINE Alu 1 313 0 2327 64 4 0 chr10 123173336 123173616 -22415672 + AluSg SINE Alu 6 286 -24 208 308 123 54 chr10 123173655 123173767 -22415521 + L2 LINE L2 3133 3257 -15 405 58 0 0 chr10 123173767 123173819 -22415469 + (TGGA)n Simple_repeat Simple_repeat 1 52 0 208 308 123 54 chr10 123173819 123173836 -22415452 + L2 LINE L2 3257 3271 -1 2139 109 0 3 chr10 123174090 123174396 -22414892 + AluSx SINE Alu 1 305 0 189 0 0 0 chr10 123175499 123175520 -22413768 + (TA)n Simple_repeat Simple_repeat 1 21 0 1135 156 0 0 chr10 123176587 123176767 -22412521 - AluSg/x SINE Alu -1 311 132 2349 100 13 0 chr10 123176791 123177100 -22412188 - AluSp SINE Alu 0 313 1 369 0 0 0 chr10 123177271 123177312 -22411976 + (TG)n Simple_repeat Simple_repeat 2 42 0 953 183 32 5 chr10 123178635 123178821 -22410467 - MLT1A1 LTR MaLR 0 365 175 2290 90 10 0 chr10 123178955 123179243 -22410045 + AluSg SINE Alu 1 291 -19 2466 94 0 0 chr10 123179243 123179552 -22409736 + AluSg1 SINE Alu 1 309 0 340 286 59 15 chr10 123179554 123179715 -22409573 - MIR SINE MIR -62 146 9 379 335 127 21 chr10 123179804 123180040 -22409248 - MIR SINE MIR 0 262 2 1202 141 0 0 chr10 123181814 123181991 -22407297 - AluSg/x SINE Alu -2 310 134 2048 141 3 0 chr10 123181991 123182290 -22406998 - AluSx SINE Alu -12 300 1 2387 75 7 0 chr10 123182690 123182982 -22406306 + AluSp SINE Alu 1 294 -19 1625 152 6 56 chr10 123184283 123184606 -22404682 - AluJo SINE Alu -5 307 1 286 294 88 7 chr10 123184622 123184758 -22404530 - LTR67 LTR ERVL 0 557 411 965 160 0 53 chr10 123186571 123186740 -22402548 - AluJb SINE Alu -19 293 134 2263 102 0 0 chr10 123186743 123187036 -22402252 - AluSg SINE Alu -17 293 1 234 345 61 93 chr10 123188837 123189087 -22400201 + L2 LINE L2 2830 3061 -211 1903 123 11 4 chr10 123189087 123189363 -22399925 - AluSx SINE Alu -2 310 33 234 345 61 93 chr10 123189363 123189553 -22399735 + L2 LINE L2 3061 3256 -16 2188 124 3 0 chr10 123189613 123189911 -22399377 - AluSx SINE Alu -13 299 1 282 95 0 0 chr10 123190200 123190242 -22399046 + (TG)n Simple_repeat Simple_repeat 1 42 0 342 0 0 0 chr10 123191879 123191917 -22397371 + (CA)n Simple_repeat Simple_repeat 1 38 0 634 236 25 25 chr10 123192835 123192996 -22396292 - MIR SINE MIR -71 191 31 709 279 54 14 chr10 123193704 123193926 -22395362 + L2 LINE L2 3083 3313 0 383 363 117 18 chr10 123195706 123195987 -22393301 - L2 LINE L2 -1 3271 2963 1350 172 17 13 chr10 123196023 123196256 -22393032 + MER46A DNA MER2_type 1 234 -2 845 256 72 75 chr10 123196720 123197288 -22392000 - MLT1G1 LTR MaLR -5 562 1 4256 164 61 16 chr10 123198832 123198953 -22390335 - L1MB7 LINE L1 -9 6175 6061 2345 88 3 0 chr10 123198953 123199250 -22390038 - AluSp SINE Alu -15 298 1 4256 164 61 16 chr10 123199250 123199931 -22389357 - L1MB7 LINE L1 -123 6061 5337 378 289 61 0 chr10 123200179 123200293 -22388995 - MIR3 SINE MIR -41 167 47 339 304 87 12 chr10 123200391 123200552 -22388736 - MIR SINE MIR -24 238 66 197 275 84 76 chr10 123200949 123201080 -22388208 - MIR3 SINE MIR -75 133 2 731 248 64 90 chr10 123201095 123201406 -22387882 + L3 LINE CR1 1265 1567 -10 2334 55 0 0 chr10 123201652 123201924 -22387364 + L1PA5 LINE L1 5880 6151 -3 645 199 45 68 chr10 123202055 123202231 -22387057 + MER5B DNA MER1_type 1 172 -6 554 216 101 14 chr10 123202361 123202509 -22386779 + MIR SINE MIR 2 162 -100 207 69 0 0 chr10 123204191 123204220 -22385068 + (A)n Simple_repeat Simple_repeat 1 29 0 1879 224 99 99 chr10 123204222 123205455 -22383833 - L1MC4 LINE L1 -6 8036 6682 406 277 0 0 chr10 123206322 123206416 -22382872 + MER5C DNA MER1_type 29 122 -202 330 149 14 40 chr10 123206555 123206629 -22382659 + MER5C DNA MER1_type 250 321 -3 189 271 71 82 chr10 123206677 123206762 -22382526 + L2 LINE L2 3221 3304 -9 24 0 0 0 chr10 123206831 123206855 -22382433 + AT_rich Low_complexity Low_complexity 1 24 0 358 293 183 16 chr10 123208222 123208413 -22380875 - MIR SINE MIR -30 232 10 213 281 141 8 chr10 123208822 123208943 -22380345 - MIR SINE MIR -23 239 103 288 336 0 27 chr10 123209991 123210101 -22379187 + CT-rich Low_complexity Low_complexity 6 112 0 21 0 0 0 chr10 123210274 123210295 -22378993 + AT_rich Low_complexity Low_complexity 1 21 0 2375 80 3 7 chr10 123210696 123210996 -22378292 + AluSq SINE Alu 1 299 -14 218 206 0 55 chr10 123212569 123212642 -22376646 + T-rich Low_complexity Low_complexity 6 74 0 1342 176 185 0 chr10 123212644 123212937 -22376351 - L1MB5 LINE L1 -1 6173 5831 2134 101 14 0 chr10 123213130 123213456 -22375832 - AluSq SINE Alu 0 330 1 301 338 113 41 chr10 123213472 123214055 -22375233 + L2 LINE L2 2647 3286 -27 1979 100 82 7 chr10 123214055 123214336 -22374952 - AluSx SINE Alu -10 302 1 301 338 113 41 chr10 123214336 123214360 -22374928 + L2 LINE L2 3286 3307 -6 21 36 0 0 chr10 123215393 123215421 -22373867 + AT_rich Low_complexity Low_complexity 1 28 0 183 114 38 38 chr10 123215428 123215507 -22373781 + (TA)n Simple_repeat Simple_repeat 1 79 0 254 138 52 0 chr10 123215509 123215567 -22373721 + LTR66 LTR ERVL 394 454 -156 456 250 250 70 chr10 123215568 123215852 -22373436 + L2 LINE L2 2963 3297 -16 213 213 0 0 chr10 123215852 123215899 -22373389 + (TGGA)n Simple_repeat Simple_repeat 2 48 0 402 343 98 40 chr10 123216125 123216422 -22372866 + L3 LINE CR1 1263 1576 -1 1840 101 0 48 chr10 123216464 123216732 -22372556 - AluSc SINE Alu 0 309 55 466 349 51 48 chr10 123217645 123217937 -22371351 + L2 LINE L2 2978 3270 -2 1917 116 22 4 chr10 123219686 123219985 -22369303 - AluSx SINE Alu 0 308 5 3558 164 47 56 chr10 123220016 123220578 -22368710 + L1MB7 LINE L1 5430 5985 -199 1869 116 4 4 chr10 123220578 123220836 -22368452 + AluSx SINE Alu 1 258 -54 3558 164 47 56 chr10 123220836 123221025 -22368263 + L1MB7 LINE L1 5985 6174 -10 396 0 0 0 chr10 123222418 123222462 -22366826 + (TG)n Simple_repeat Simple_repeat 2 45 0 343 247 0 0 chr10 123223477 123223550 -22365738 + MER116 DNA Mariner 6 78 -2 366 241 23 11 chr10 123223749 123223836 -22365452 + MER46C DNA MER2_type 164 251 -87 1723 173 54 0 chr10 123223854 123224149 -22365139 - AluJo SINE Alu -1 311 1 1693 224 80 16 chr10 123224291 123224777 -22364511 - MER69 DNA AcHobo 0 2526 2010 1270 233 100 19 chr10 123224784 123225241 -22364047 - MER69 DNA AcHobo -667 559 37 259 280 75 65 chr10 123225282 123225375 -22363913 - MIR SINE MIR -162 100 7 707 247 77 16 chr10 123226326 123226520 -22362768 - MIR SINE MIR -56 206 1 1722 134 158 3 chr10 123226687 123226985 -22362303 - MER7A DNA MER2_type -4 342 1 497 246 16 16 chr10 123227408 123227534 -22361754 - MIR3 SINE MIR -32 176 51 2554 49 0 13 chr10 123228025 123228332 -22360956 - AluY SINE Alu -7 304 2 961 201 29 14 chr10 123228332 123228541 -22360747 - Charlie2a DNA MER1_type -1179 1683 1472 1345 246 194 10 chr10 123228650 123229154 -22360134 - Charlie2b DNA MER1_type -2120 662 66 260 219 95 31 chr10 123229174 123229312 -22359976 + L1M1 LINE L1 5662 5814 -400 1625 157 15 89 chr10 123229579 123229916 -22359372 - AluJo SINE Alu 0 312 1 205 313 73 0 chr10 123230723 123230819 -22358469 + L2 LINE L2 3193 3295 -18 198 0 0 0 chr10 123230880 123230902 -22358386 + (A)n Simple_repeat Simple_repeat 1 22 0 5413 244 81 40 chr10 123231413 123232595 -22356693 - L1MEc LINE L1 -2061 4583 3451 2400 100 3 0 chr10 123232595 123232906 -22356382 - AluSx SINE Alu 0 312 1 5413 244 81 40 chr10 123232906 123234382 -22354906 - L1MEc LINE L1 -3193 3451 1876 1812 241 90 65 chr10 123234387 123235246 -22354042 - L1MEc LINE L1 -4951 1591 712 245 283 0 22 chr10 123235576 123235668 -22353620 - L1MEc LINE L1 -6358 184 95 1326 130 0 5 chr10 123236899 123237083 -22352205 + AluSg SINE Alu 1 183 -127 368 282 39 72 chr10 123237204 123237385 -22351903 - MIR3 SINE MIR -14 194 20 417 203 104 77 chr10 123239129 123239181 -22350107 - L1ME4a LINE L1 -38 6083 6034 1841 173 16 0 chr10 123239181 123239488 -22349800 + AluJo SINE Alu 1 312 0 417 203 104 77 chr10 123239488 123239657 -22349631 - L1ME4a LINE L1 -87 6034 5856 195 208 21 0 chr10 123239896 123239944 -22349344 - MIR SINE MIR -56 206 158 644 280 60 0 chr10 123240083 123240265 -22349023 + MIR SINE MIR 28 220 -42 26 0 0 0 chr10 123240274 123240300 -22348988 + AT_rich Low_complexity Low_complexity 1 26 0 2109 132 3 7 chr10 123240338 123240642 -22348646 - AluSx SINE Alu -9 303 1 25 0 0 0 chr10 123240723 123240748 -22348540 + AT_rich Low_complexity Low_complexity 1 25 0 281 164 16 16 chr10 123240804 123240865 -22348423 - L1ME4a LINE L1 -97 6024 5964 2105 107 7 23 chr10 123241023 123241331 -22347957 + AluSx SINE Alu 1 303 -9 22 0 0 0 chr10 123242024 123242046 -22347242 + AT_rich Low_complexity Low_complexity 1 22 0 192 173 173 107 chr10 123243616 123243691 -22345597 - MIR SINE MIR -113 149 70 785 227 149 8 chr10 123244192 123244434 -22344854 + Charlie8 DNA MER1_type 1 276 -2141 205 60 0 80 chr10 123244832 123244882 -22344406 + (GA)n Simple_repeat Simple_repeat 2 47 0 389 269 0 31 chr10 123245426 123245556 -22343732 - MIR SINE MIR -13 249 124 376 253 0 35 chr10 123245794 123245881 -22343407 - MIR SINE MIR -147 115 32 1524 148 50 18 chr10 123246873 123247156 -22342132 + AluJo SINE Alu 1 292 -20 490 238 49 8 chr10 123247336 123247458 -22341830 + MIR SINE MIR 117 243 -19 2157 110 0 3 chr10 123247969 123248277 -22341011 - AluSq SINE Alu -6 307 1 2020 125 7 3 chr10 123248858 123249162 -22340126 - AluSx SINE Alu -7 305 1 270 218 75 105 chr10 123249174 123249307 -22339981 - MIR SINE MIR -55 207 79 3687 176 20 26 chr10 123249438 123250200 -22339088 + L1MB8 LINE L1 5422 6178 0 584 273 125 23 chr10 123250395 123250611 -22338677 - MIR SINE MIR -1 261 24 2323 66 0 35 chr10 123251021 123251338 -22337950 + AluY SINE Alu 1 306 -5 313 234 0 0 chr10 123251454 123251518 -22337770 + MIR SINE MIR 66 129 -79 744 272 81 16 chr10 123251583 123251903 -22337385 + MER102b DNA MER1_type 1 341 0 593 246 49 52 chr10 123252735 123253118 -22336170 - L1MC4 LINE L1 -3 8039 7604 23 0 0 0 chr10 123253970 123253993 -22335295 + AT_rich Low_complexity Low_complexity 1 23 0 905 209 124 13 chr10 123254358 123254583 -22334705 + MIR SINE MIR 13 262 0 201 382 42 28 chr10 123256577 123256721 -22332567 - MIR3 SINE MIR -20 188 43 340 320 28 44 chr10 123256957 123257138 -22332150 + MIR3 SINE MIR 27 204 -4 414 267 56 50 chr10 123257753 123257914 -22331374 - MIR SINE MIR -28 234 73 1765 205 48 11 chr10 123258283 123258722 -22330566 + L1M4 LINE L1 4899 5353 -793 216 0 0 0 chr10 123259903 123259927 -22329361 + (TAA)n Simple_repeat Simple_repeat 3 26 0 246 162 44 15 chr10 123261075 123261143 -22328145 - L1ME4a LINE L1 -4 6117 6048 1882 139 13 3 chr10 123261608 123261917 -22327371 + AluSx SINE Alu 1 312 0 236 263 18 0 chr10 123262674 123262731 -22326557 + GA-rich Low_complexity Low_complexity 2 59 0 188 383 56 19 chr10 123263159 123263266 -22326022 - L2 LINE L2 -20 3252 3142 1907 138 10 3 chr10 123263399 123263695 -22325593 + AluJb SINE Alu 1 298 -14 273 312 91 38 chr10 123263706 123263892 -22325396 - L2 LINE L2 0 3272 3077 1827 123 0 60 chr10 123264000 123264318 -22324970 - AluSx SINE Alu -13 299 1 387 228 97 21 chr10 123264342 123264487 -22324801 - L1ME4a LINE L1 -5 6116 5961 315 192 55 0 chr10 123264599 123264672 -22324616 - L1ME4a LINE L1 -367 5754 5678 384 294 41 18 chr10 123265009 123265162 -22324126 + MER5A DNA MER1_type 1 167 -22 495 301 35 0 chr10 123265225 123265398 -22323890 + MIR SINE MIR 14 192 -70 1870 108 81 34 chr10 123266776 123267099 -22322189 - MER44D DNA MER2_type 0 609 2 2183 105 0 0 chr10 123267242 123267547 -22321741 + AluSg SINE Alu 3 307 -3 225 0 0 0 chr10 123269543 123269568 -22319720 + (TG)n Simple_repeat Simple_repeat 1 25 0 367 209 9 78 chr10 123270076 123270191 -22319097 - L3 LINE CR1 -4 1573 1467 294 293 155 0 chr10 123270792 123270908 -22318380 - L2 LINE L2 -61 3252 3119 420 266 36 89 chr10 123270945 123271102 -22318186 - LTR16B LTR ERVL 0 464 300 2002 100 0 45 chr10 123271102 123271411 -22317877 - AluSx SINE Alu -17 295 1 420 266 36 89 chr10 123271411 123271638 -22317650 - LTR16B LTR ERVL -164 300 95 2049 99 3 3 chr10 123271834 123272117 -22317171 - AluSx SINE Alu -29 283 1 2335 73 3 0 chr10 123272960 123273261 -22316027 + AluSp SINE Alu 1 302 -11 1258 145 121 44 chr10 123275163 123275465 -22313823 + AluJo SINE Alu 15 335 0 399 330 50 22 chr10 123275691 123275873 -22313415 - MIR SINE MIR -1 261 75 342 278 156 30 chr10 123275872 123276102 -22313186 + L2 LINE L2 2772 3041 -231 * 1830 96 66 4 chr10 123276114 123276385 -22312903 - AluSx SINE Alu -24 288 1 1644 178 7 10 chr10 123276388 123276686 -22312602 - AluJo SINE Alu -15 297 1 800 221 232 11 chr10 123277072 123277357 -22311931 - MLT1C LTR MaLR -10 457 110 2184 96 3 3 chr10 123277378 123277681 -22311607 + AluSq SINE Alu 9 311 -2 1838 149 0 0 chr10 123277749 123278037 -22311251 + AluJo SINE Alu 15 302 -10 400 154 115 0 chr10 123278038 123278116 -22311172 - MLT1C LTR MaLR -375 92 6 2283 95 3 0 chr10 123278143 123278448 -22310840 + AluSx SINE Alu 1 306 -6 1075 272 55 50 chr10 123278459 123278896 -22310392 - MLT1K LTR MaLR -39 549 111 253 301 72 0 chr10 123279515 123279598 -22309690 - L2 LINE L2 0 3313 3225 570 313 84 55 chr10 123279791 123279920 -22309368 - MLT1K LTR MaLR -17 571 447 2033 120 10 3 chr10 123279920 123280220 -22309068 + AluSq SINE Alu 1 302 -11 570 313 84 55 chr10 123280220 123280528 -22308760 - MLT1K LTR MaLR -141 447 121 408 266 48 58 chr10 123281093 123281212 -22308076 - MLT1I LTR MaLR -217 192 74 2483 17 40 7 chr10 123281212 123281513 -22307775 + AluY SINE Alu 1 311 0 408 266 48 58 chr10 123281513 123281581 -22307707 - MLT1I LTR MaLR -335 74 7 188 295 90 13 chr10 123282839 123282917 -22306371 - L2 LINE L2 -25 3247 3164 315 0 0 0 chr10 123284945 123284980 -22304308 + (CA)n Simple_repeat Simple_repeat 1 35 0 24 0 0 0 chr10 123288567 123288591 -22300697 + AT_rich Low_complexity Low_complexity 1 24 0 246 62 0 0 chr10 123290074 123290106 -22299182 + (GGAA)n Simple_repeat Simple_repeat 3 34 0 354 205 167 0 chr10 123292637 123292715 -22296573 - L2 LINE L2 0 3272 3182 419 333 7 26 chr10 123293669 123293859 -22295429 - MIR3 SINE MIR -7 201 15 1984 90 4 0 chr10 123294101 123294369 -22294919 + AluSx SINE Alu 1 269 -43 439 256 6 70 chr10 123294519 123294675 -22294613 + MIR3 SINE MIR 51 196 -12 2715 235 91 19 chr10 123294799 123295526 -22293762 + MER45C DNA AcHobo 1 779 -174 1470 171 116 0 chr10 123295631 123295923 -22293365 + MER45B DNA AcHobo 715 1040 0 201 39 0 0 chr10 123296709 123296735 -22292553 + (TGAA)n Simple_repeat Simple_repeat 2 27 0 366 292 51 15 chr10 123297772 123297909 -22291379 + MIR SINE MIR 51 192 -70 26 48 0 32 chr10 123298173 123298208 -22291080 + AT_rich Low_complexity Low_complexity 1 36 -24 2369 60 3 0 chr10 123298208 123298511 -22290777 - AluY SINE Alu 0 304 1 26 48 0 32 chr10 123298511 123298536 -22290752 + AT_rich Low_complexity Low_complexity 36 60 0 936 128 0 8 chr10 123298538 123298671 -22290617 + FLAM_C SINE Alu 2 133 0 2531 57 0 0 chr10 123298970 123299266 -22290022 + AluY SINE Alu 1 296 -15 2160 131 0 10 chr10 123299276 123299581 -22289707 + AluSx SINE Alu 1 302 -10 384 268 153 41 chr10 123299860 123300302 -22288986 + L2 LINE L2 2565 3058 -214 252 0 0 0 chr10 123300630 123300658 -22288630 + (TA)n Simple_repeat Simple_repeat 2 29 0 1325 138 0 5 chr10 123300658 123300846 -22288442 - AluJb SINE Alu -14 298 112 239 363 44 0 chr10 123300866 123300979 -22288309 + L2 LINE L2 3142 3259 -13 198 0 0 0 chr10 123300979 123301001 -22288287 + (TGAA)n Simple_repeat Simple_repeat 1 22 0 500 316 31 42 chr10 123303228 123303421 -22285867 + MIR3 SINE MIR 8 198 -10 192 291 36 0 chr10 123303470 123303525 -22285763 + L2 LINE L2 3172 3228 -85 508 320 16 16 chr10 123303792 123303986 -22285302 + MIR SINE MIR 57 250 -12 724 226 54 43 chr10 123306100 123306286 -22283002 - MIR3 SINE MIR -6 202 15 2229 91 3 24 chr10 123306848 123307144 -22282144 + AluSg SINE Alu 1 290 -20 379 254 75 30 chr10 123307336 123307470 -22281818 + MIR3 SINE MIR 33 172 -36 289 292 46 23 chr10 123307724 123307854 -22281434 - MIR SINE MIR -36 226 94 412 280 60 27 chr10 123308571 123308721 -22280567 + MIR SINE MIR 20 174 -88 267 282 132 57 chr10 123309023 123309303 -22279985 - L2 LINE L2 -94 3178 2878 308 242 0 83 chr10 123309677 123309797 -22279491 + MIR SINE MIR 34 143 -119 2496 160 96 21 chr10 123309818 123310338 -22278950 + MER89 LTR ERV1 1 559 0 203 287 140 4 chr10 123310628 123310781 -22278507 + MIR SINE MIR 7 233 -29 904 55 0 0 chr10 123311859 123311969 -22277319 - AluSg/x SINE Alu -1 309 200 493 203 153 55 chr10 123312291 123312454 -22276834 + MIR3 SINE MIR 30 208 0 359 250 0 58 chr10 123312636 123312756 -22276532 - LTR33A LTR ERVL 0 523 411 428 309 7 14 chr10 123312912 123313051 -22276237 - MLT2E LTR ERVL -459 169 32 551 275 0 7 chr10 123313122 123313271 -22276017 + MER117 DNA MER1_type 1 148 -49 235 262 16 0 chr10 123313704 123313765 -22275523 + MIR3 SINE MIR 99 160 -48 2219 90 4 0 chr10 123314226 123314505 -22274783 - AluSx SINE Alu -31 281 2 2396 88 0 0 chr10 123315543 123315837 -22273451 + AluSx SINE Alu 1 294 -18 351 192 243 79 chr10 123316193 123316292 -22272996 + MER3 DNA MER1_type 1 82 -127 2526 81 0 0 chr10 123316292 123316601 -22272687 + AluY SINE Alu 1 309 -2 351 192 243 79 chr10 123316601 123316678 -22272610 + MER3 DNA MER1_type 82 206 -3 728 139 168 0 chr10 123316747 123316884 -22272404 + MLT1D LTR MaLR 346 505 0 246 260 0 65 chr10 123317620 123317697 -22271591 - L2 LINE L2 0 3272 3201 552 155 78 39 chr10 123317769 123317898 -22271390 + MLT1H LTR MaLR 416 549 0 278 281 11 11 chr10 123318620 123318709 -22270579 - L2 LINE L2 -213 3059 2971 638 200 16 89 chr10 123320358 123320514 -22268774 + MER69A DNA AcHobo 1 142 -2384 781 191 127 0 chr10 123320514 123320671 -22268617 - MER45A DNA AcHobo -1 177 1 638 200 16 89 chr10 123320671 123320704 -22268584 + MER69A DNA AcHobo 142 176 -1 336 198 38 9 chr10 123321415 123321521 -22267767 - LTR33A LTR ERVL -9 514 406 2249 105 6 25 chr10 123322578 123322892 -22266396 - AluSg SINE Alu -2 308 1 259 326 35 0 chr10 123323182 123323268 -22266020 + MIR SINE MIR 83 171 -91 559 277 15 7 chr10 123324117 123324254 -22265034 - MIR SINE MIR -114 148 11 268 293 65 15 chr10 123324328 123324458 -22264830 + MIR SINE MIR 21 163 -61 246 227 159 34 chr10 123325566 123325654 -22263634 + L2 LINE L2 3203 3301 -12 2928 138 14 82 chr10 123326571 123327129 -22262159 - MLT2B1 LTR ERVL 0 520 1 315 0 0 0 chr10 123327137 123327172 -22262116 + (TTCC)n Simple_repeat Simple_repeat 2 36 0 201 214 107 0 chr10 123327511 123327567 -22261721 + MIR SINE MIR 97 158 -104 567 200 69 0 chr10 123327721 123327866 -22261422 - Charlie4 DNA MER1_type -36 1925 1771 2340 106 13 0 chr10 123327868 123328169 -22261119 - AluSx SINE Alu -7 305 1 1037 134 0 37 chr10 123328170 123328334 -22260954 - AluSq SINE Alu -14 299 142 1678 134 29 0 chr10 123328336 123328582 -22260706 + AluSx SINE Alu 45 297 -15 1026 145 0 6 chr10 123329615 123330083 -22259205 + (TGGA)n Simple_repeat Simple_repeat 1 465 0 348 308 42 25 chr10 123331456 123331576 -22257712 + L2 LINE L2 3142 3263 -9 356 306 65 70 chr10 123331600 123331829 -22257459 - MIR SINE MIR -29 233 6 444 282 81 7 chr10 123332098 123332247 -22257041 + MIR3 SINE MIR 21 180 -28 188 266 117 78 chr10 123332419 123332547 -22256741 + MIR3 SINE MIR 14 146 -62 2277 125 0 0 chr10 123332628 123332925 -22256363 + AluSq SINE Alu 2 298 -15 242 95 24 0 chr10 123333296 123333338 -22255950 + (TA)n Simple_repeat Simple_repeat 2 44 0 2243 125 23 8 chr10 123333338 123333691 -22255597 - THE1B LTR MaLR -5 359 2 247 191 64 154 chr10 123333796 123333984 -22255304 + L1ME4a LINE L1 5944 6114 -7 228 187 44 88 chr10 123334099 123334190 -22255098 + LTR67 LTR ERVL 81 167 -390 * 593 149 26 0 chr10 123334135 123334249 -22255039 + MLT1J LTR MaLR 106 222 -289 366 114 34 80 chr10 123334303 123334391 -22254897 + MLT1J LTR MaLR 419 502 -9 429 285 101 0 chr10 123334936 123335094 -22254194 - L1MC5 LINE L1 -1174 6787 6614 1103 215 43 94 chr10 123335289 123335731 -22253557 + L1MC5 LINE L1 6779 7192 -798 2288 117 3 0 chr10 123335731 123336039 -22253249 + AluSq SINE Alu 1 309 -4 1103 215 43 94 chr10 123336039 123336107 -22253181 + L1MC5 LINE L1 7192 7262 -728 733 238 52 20 chr10 123336194 123336446 -22252842 + L1MC5 LINE L1 7262 7521 -440 * 1218 172 39 55 chr10 123336417 123336610 -22252678 + L1MB5 LINE L1 5860 6043 -131 2180 119 3 3 chr10 123336610 123336905 -22252383 - AluSq SINE Alu -18 295 1 1218 172 39 55 chr10 123336905 123337028 -22252260 + L1MB5 LINE L1 6043 6166 -8 533 209 87 68 chr10 123337040 123337130 -22252158 + L1MC5 LINE L1 7510 7597 -364 2378 84 10 0 chr10 123337130 123337426 -22251862 + AluSc SINE Alu 1 299 -10 533 209 87 68 chr10 123337426 123337747 -22251541 + L1MC5 LINE L1 7597 7929 -32 971 253 49 65 chr10 123337774 123338225 -22251063 + L1ME4a LINE L1 5384 5826 -295 1985 162 0 3 chr10 123338225 123338534 -22250754 - AluJb SINE Alu -3 309 2 971 253 49 65 chr10 123338534 123338635 -22250653 + L1ME4a LINE L1 5826 5927 -194 2103 122 31 0 chr10 123338979 123339273 -22250015 - AluSx SINE Alu -9 303 1 970 133 61 25 chr10 123339333 123339529 -22249759 + L1MA9 LINE L1 6106 6308 -4 33 0 0 0 chr10 123339532 123339565 -22249723 + AT_rich Low_complexity Low_complexity 1 33 0 2306 90 0 27 chr10 123339590 123339918 -22249370 + AluSx SINE Alu 1 312 0 266 300 0 0 chr10 123339918 123339978 -22249310 + MER63 DNA MER1_type 1001 1060 -1 732 177 0 0 chr10 123340287 123340428 -22248860 + GA-rich Low_complexity Low_complexity 4 144 0 251 203 89 38 chr10 123340456 123340535 -22248753 + L2 LINE L2 3174 3256 -16 2238 110 3 3 chr10 123340602 123340901 -22248387 - AluSx SINE Alu -13 299 1 328 279 29 29 chr10 123341008 123341112 -22248176 - MIR SINE MIR -109 153 50 279 261 148 0 chr10 123341448 123341536 -22247752 - MIR SINE MIR -57 205 105 448 281 179 15 chr10 123341545 123341808 -22247480 - LTR16C LTR ERVL -40 451 146 1995 164 3 0 chr10 123342006 123342316 -22246972 + AluJb SINE Alu 1 311 -1 1961 132 3 57 chr10 123342405 123342723 -22246565 + AluSq SINE Alu 1 301 -12 810 228 56 28 chr10 123343091 123343306 -22245982 - MER58A DNA MER1_type -3 221 1 520 289 75 6 chr10 123343306 123343479 -22245809 - MIR SINE MIR -59 203 19 558 281 46 51 chr10 123344762 123344979 -22244309 + MIR SINE MIR 32 247 -15 1866 139 85 0 chr10 123344992 123345273 -22244015 - AluSq SINE Alu -8 305 1 1688 188 35 27 chr10 123345387 123345760 -22243528 - L1PB4 LINE L1 -5 6151 5776 315 250 50 40 chr10 123345786 123345886 -22243402 + L1MC4 LINE L1 6603 6703 -1339 * 321 258 11 34 chr10 123345817 123345906 -22243382 - L1MC4 LINE L1 -1339 6703 6617 2409 115 0 0 chr10 123345933 123346307 -22242981 - L1P5 LINE L1 -388 5768 5395 251 186 130 28 chr10 123346336 123346447 -22242841 + MIR SINE MIR 26 153 -55 2695 152 77 17 chr10 123346540 123346968 -22242320 + MLT2B2 LTR ERVL 4 466 -49 577 66 22 0 chr10 123346968 123347059 -22242229 + (TCTA)n Simple_repeat Simple_repeat 4 96 0 2695 152 77 17 chr10 123347059 123347111 -22242177 + MLT2B2 LTR ERVL 466 513 -2 212 217 22 0 chr10 123347455 123347501 -22241787 + L2 LINE L2 3266 3312 -1 24 0 0 0 chr10 123347578 123347602 -22241686 + AT_rich Low_complexity Low_complexity 1 24 0 1251 260 154 23 chr10 123347608 123348128 -22241160 + MLT1G LTR MaLR 1 588 -2 520 229 46 23 chr10 123348143 123348208 -22241080 + L2 LINE L2 3180 3242 -71 636 242 67 6 chr10 123348208 123348373 -22240915 + MER96 DNA MER1_type 1 175 0 520 229 46 23 chr10 123348373 123348438 -22240850 + L2 LINE L2 3242 3313 0 231 385 0 34 chr10 123348486 123348603 -22240685 + MIR3 SINE MIR 9 121 -87 225 256 90 60 chr10 123349002 123349135 -22240153 + MIR SINE MIR 2 138 -124 1259 266 68 3 chr10 123349135 123349503 -22239785 - MLT1J2 LTR MaLR -20 430 39 195 349 23 0 chr10 123349528 123349657 -22239631 + MIR SINE MIR 128 259 -3 2236 111 10 0 chr10 123350361 123350659 -22238629 - AluSx SINE Alu -11 301 1 183 211 26 0 chr10 123350667 123350705 -22238583 - MIR SINE MIR -114 148 110 254 228 6 122 chr10 123350791 123350907 -22238381 - MLT1I LTR MaLR 0 549 287 2149 121 7 7 chr10 123352050 123352356 -22236932 + AluSx SINE Alu 1 306 -6 301 291 14 40 chr10 123352634 123352782 -22236506 - L1ME1 LINE L1 -5 6161 6018 482 293 54 24 chr10 123353157 123353324 -22235964 + MER91A DNA MER1_type 1 172 -24 1486 187 39 21 chr10 123353775 123354059 -22235229 - AluJo SINE Alu -23 289 1 498 252 39 26 chr10 123354203 123354358 -22234930 - MLT1K LTR MaLR 0 588 432 485 287 16 0 chr10 123354682 123354811 -22234477 - MLT1K LTR MaLR -155 433 303 260 195 156 109 chr10 123354865 123354993 -22234295 - MLT1K LTR MaLR -411 177 44 306 0 0 0 chr10 123355035 123355069 -22234219 + (CA)n Simple_repeat Simple_repeat 2 35 0 1756 167 14 7 chr10 123355102 123355396 -22233892 - AluJo SINE Alu -16 296 1 213 154 0 0 chr10 123356638 123356677 -22232611 + GA-rich Low_complexity Low_complexity 2 40 0 269 268 174 95 chr10 123356897 123357415 -22231873 - MLT1K LTR MaLR -12 576 18 198 214 0 0 chr10 123357483 123357525 -22231763 - L3 LINE CR1 -113 1464 1423 2446 117 22 8 chr10 123358095 123358454 -22230834 - THE1B LTR MaLR 0 364 1 243 270 11 11 chr10 123358549 123358638 -22230650 + MIR SINE MIR 57 145 -117 3310 176 57 63 chr10 123358640 123359494 -22229794 + L1MC4a LINE L1 6960 7808 0 1970 136 30 10 chr10 123359500 123359795 -22229493 + AluSx SINE Alu 1 301 -11 369 274 24 43 chr10 123361163 123361327 -22227961 + L2 LINE L2 1856 2016 -1298 376 278 125 48 chr10 123361329 123361367 -22227921 - MLT1K LTR MaLR -2 586 552 2204 101 3 7 chr10 123361367 123361688 -22227600 + AluSg SINE Alu 1 310 0 376 278 125 48 chr10 123361688 123361897 -22227391 - MLT1K LTR MaLR -36 552 320 322 268 195 0 chr10 123362417 123362540 -22226748 - MIR SINE MIR -96 166 20 1899 147 22 29 chr10 123362834 123363147 -22226141 + AluJb SINE Alu 1 311 -1 1583 156 86 11 chr10 123363190 123363459 -22225829 + AluJo SINE Alu 6 294 -18 668 290 6 0 chr10 123363469 123363645 -22225643 - MIR SINE MIR -68 194 18 2677 52 0 3 chr10 123363659 123363967 -22225321 + AluY SINE Alu 1 307 -4 2183 127 0 10 chr10 123364119 123364419 -22224869 + AluSx SINE Alu 1 297 -15 234 314 29 39 chr10 123364468 123364570 -22224718 - L2 LINE L2 -11 3302 3202 544 196 93 67 chr10 123364570 123364702 -22224586 - MLT1K LTR MaLR -18 570 443 2317 111 0 13 chr10 123364702 123365018 -22224270 + AluSq SINE Alu 2 313 0 216 0 0 0 chr10 123365021 123365045 -22224243 + (CAT)n Simple_repeat Simple_repeat 2 25 0 544 196 93 67 chr10 123365045 123365102 -22224186 - MLT1K LTR MaLR -146 442 372 184 335 57 44 chr10 123365432 123365590 -22223698 - L2 LINE L2 -190 3082 2923 2090 111 0 7 chr10 123365624 123365895 -22223393 + AluSx SINE Alu 24 292 -20 220 309 64 21 chr10 123366409 123366503 -22222785 - MER91C DNA MER1_type -40 100 3 243 239 14 14 chr10 123367244 123367315 -22221973 - MIR SINE MIR -79 129 59 451 175 75 0 chr10 123367373 123367453 -22221835 + MLT1F1 LTR MaLR 40 125 -442 1955 194 30 28 chr10 123367453 123367885 -22221403 + L1MD3 LINE L1 7404 7836 -159 926 161 68 0 chr10 123367892 123368053 -22221235 - AluJb SINE Alu -3 309 138 837 159 13 7 chr10 123368053 123368204 -22221084 + L1MD3 LINE L1 7835 7986 -9 856 276 151 43 chr10 123368703 123369231 -22220057 + MLT1H1 LTR MaLR 16 552 -3 923 282 82 43 chr10 123369394 123369715 -22219573 + L2 LINE L2 2709 3059 -254 1945 143 0 53 chr10 123369715 123370037 -22219251 - AluSx SINE Alu -7 305 1 923 282 82 43 chr10 123370037 123370303 -22218985 + L2 LINE L2 3059 3313 0 1552 216 27 6 chr10 123370462 123370796 -22218492 - MER58B DNA MER1_type 0 341 1 268 158 18 35 chr10 123371224 123371264 -22218024 - MLT2B1 LTR ERVL 0 520 480 270 0 0 0 chr10 123371264 123371294 -22217994 + (CA)n Simple_repeat Simple_repeat 2 31 0 268 158 18 35 chr10 123371294 123371310 -22217978 - MLT2B1 LTR ERVL -40 480 465 206 211 35 18 chr10 123371344 123371401 -22217887 + (TATG)n Simple_repeat Simple_repeat 1 58 0 1899 202 96 36 chr10 123371401 123371478 -22217810 - MLT2B1 LTR ERVL -41 479 408 1809 148 37 20 chr10 123371478 123371776 -22217512 + AluSx SINE Alu 1 303 -9 1899 202 96 36 chr10 123371776 123372148 -22217140 - MLT2B1 LTR ERVL -112 408 3 222 37 0 0 chr10 123372349 123372376 -22216912 + (TTA)n Simple_repeat Simple_repeat 2 28 0 2116 136 0 0 chr10 123372389 123372676 -22216612 - AluSx SINE Alu -25 287 1 1951 127 32 19 chr10 123372724 123373032 -22216256 + AluSx SINE Alu 1 312 0 279 0 0 0 chr10 123373185 123373216 -22216072 + (TTTTA)n Simple_repeat Simple_repeat 4 34 0 2307 92 0 17 chr10 123373226 123373521 -22215767 - AluSx SINE Alu -22 290 1 33 0 0 0 chr10 123373546 123373579 -22215709 + AT_rich Low_complexity Low_complexity 1 33 0 996 133 61 25 chr10 123373582 123373778 -22215510 - L1MA9 LINE L1 -4 6308 6106 1998 133 31 0 chr10 123373836 123374130 -22215158 + AluSx SINE Alu 1 303 -9 1082 253 49 65 chr10 123374474 123374575 -22214713 - L1ME4a LINE L1 -194 5927 5826 1949 162 0 3 chr10 123374575 123374884 -22214404 + AluJb SINE Alu 2 309 -3 1082 253 49 65 chr10 123374884 123375335 -22213953 - L1ME4a LINE L1 -295 5826 5384 458 243 88 57 chr10 123375362 123375679 -22213609 - L1MC5 LINE L1 -32 7929 7603 299 100 33 0 chr10 123375683 123375743 -22213545 - AluSc SINE Alu 0 299 238 891 123 31 0 chr10 123375926 123376056 -22213232 + MER63 DNA MER1_type 1 760 -76 1954 155 7 3 chr10 123376082 123376379 -22212909 + AluSx SINE Alu 2 299 -13 2127 113 0 23 chr10 123376385 123376711 -22212577 + AluSx SINE Alu 1 312 0 290 292 0 0 chr10 123376711 123376771 -22212517 + MER63 DNA MER1_type 1000 1059 -1 732 177 0 0 chr10 123377080 123377221 -22212067 + GA-rich Low_complexity Low_complexity 4 144 0 226 184 20 61 chr10 123377279 123377328 -22211960 + L2 LINE L2 3210 3256 -16 2218 110 3 3 chr10 123377395 123377694 -22211594 - AluSx SINE Alu -13 299 1 296 274 29 29 chr10 123377803 123377905 -22211383 - MIR SINE MIR -111 151 50 206 267 40 13 chr10 123378254 123378329 -22210959 - MIR SINE MIR -81 181 105 229 179 0 0 chr10 123378338 123378377 -22210911 - LTR16C LTR ERVL -40 451 413 1225 264 64 3 chr10 123378487 123378854 -22210434 - MLT1J2 LTR MaLR -21 490 39 195 349 23 0 chr10 123378879 123379008 -22210280 + MIR SINE MIR 128 259 -3 2159 112 7 13 chr10 123379710 123380014 -22209274 - AluSx SINE Alu -10 302 1 1919 160 52 40 chr10 123380014 123380475 -22208813 - L1MA7 LINE L1 -182 6109 5608 1975 142 0 19 chr10 123380475 123380792 -22208496 - AluSx SINE Alu 0 312 2 1919 160 52 40 chr10 123380792 123380860 -22208428 - L1MA7 LINE L1 -683 5608 5542 1140 267 81 50 chr10 123381087 123381592 -22207696 + MLT1L LTR MaLR 1 521 -94 932 172 0 12 chr10 123381593 123381756 -22207532 - FRAM SINE Alu -5 171 11 292 226 75 28 chr10 123381762 123381806 -22207482 + MLT1L LTR MaLR 505 545 -70 1927 103 4 0 chr10 123381806 123382058 -22207230 - AluSx SINE Alu -59 253 1 292 226 75 28 chr10 123382058 123382119 -22207169 + MLT1L LTR MaLR 545 615 0 239 261 43 0 chr10 123382195 123382264 -22207024 - L2 LINE L2 -16 3256 3185 1207 229 122 18 chr10 123382264 123382415 -22206873 + MLT1H1 LTR MaLR 1 135 -420 2028 124 3 7 chr10 123382415 123382745 -22206543 + AluSx SINE Alu 1 329 0 1207 229 122 18 chr10 123382745 123383035 -22206253 + MLT1H1 LTR MaLR 135 495 -60 390 96 0 0 chr10 123383035 123383123 -22206165 + FLAM_A SINE Alu 64 151 0 364 188 0 0 chr10 123383124 123383188 -22206100 + MLT1H1 LTR MaLR 490 553 -2 197 309 206 8 chr10 123383198 123383324 -22205964 - MIR SINE MIR -110 152 2 1585 153 48 44 chr10 123383615 123383909 -22205379 + AluJb SINE Alu 1 295 -17 205 298 18 0 chr10 123383912 123383969 -22205319 - L2 LINE L2 -14 3258 3201 741 246 31 5 chr10 123384718 123384913 -22204375 + MIR SINE MIR 60 259 -3 289 109 36 0 chr10 123384914 123384969 -22204319 + (CAT)n Simple_repeat Simple_repeat 2 58 0 230 246 31 0 chr10 123385363 123385428 -22203860 + L2 LINE L2 3206 3272 0 194 105 26 0 chr10 123386022 123386060 -22203228 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 2053 126 27 3 chr10 123386596 123386889 -22202399 + AluJo SINE Alu 2 301 -11 1756 149 0 62 chr10 123387045 123387367 -22201921 - AluJo SINE Alu -6 306 5 184 237 145 13 chr10 123388369 123388445 -22200843 + MER5A DNA MER1_type 37 122 -67 278 320 24 16 chr10 123388606 123388731 -22200557 - MIR SINE MIR -44 218 93 2153 128 3 6 chr10 123388900 123389212 -22200076 - AluSx SINE Alu -1 311 1 261 342 104 31 chr10 123389221 123389481 -22199807 + L2 LINE L2 2994 3272 0 216 267 0 0 chr10 123389484 123389529 -22199759 + (TGGA)n Simple_repeat Simple_repeat 1 45 0 2001 144 0 3 chr10 123390261 123390559 -22198729 + AluJb SINE Alu 1 297 -15 627 151 11 17 chr10 123390596 123390775 -22198513 + (CA)n Simple_repeat Simple_repeat 1 178 0 356 118 15 0 chr10 123390786 123390854 -22198434 + (CA)n Simple_repeat Simple_repeat 2 70 0 2488 42 3 0 chr10 123393659 123393947 -22195341 + AluY SINE Alu 1 289 -22 198 103 0 0 chr10 123394225 123394254 -22195034 + (A)n Simple_repeat Simple_repeat 1 29 0 21 0 0 0 chr10 123394411 123394432 -22194856 + AT_rich Low_complexity Low_complexity 1 21 0 2389 82 3 7 chr10 123394477 123394783 -22194505 + AluSg1 SINE Alu 1 305 -4 295 78 39 20 chr10 123395279 123395330 -22193958 + AluJb SINE Alu 84 135 -167 2034 130 3 3 chr10 123395330 123395630 -22193658 + AluSx SINE Alu 1 300 -12 387 292 23 29 chr10 123395747 123395918 -22193370 - MER5B DNA MER1_type -8 170 1 249 225 16 47 chr10 123395913 123395926 -22193362 + MER5B DNA MER1_type 80 92 -97 * 317 303 146 0 chr10 123395926 123396091 -22193197 + MER5A DNA MER1_type 1 189 0 249 225 16 47 chr10 123396091 123396177 -22193111 + MER5B DNA MER1_type 92 171 -18 268 221 269 29 chr10 123396282 123396386 -22192902 + MIR SINE MIR 31 159 -103 1981 140 0 3 chr10 123396450 123396736 -22192552 + AluJo SINE Alu 2 286 -26 893 123 0 0 chr10 123397173 123397303 -22191985 + AluSg/x SINE Alu 173 302 -8 2287 112 0 0 chr10 123397307 123397601 -22191687 + AluSx SINE Alu 1 294 -18 1831 132 0 47 chr10 123397612 123397931 -22191357 + AluSx SINE Alu 3 306 -6 32 0 0 0 chr10 123398002 123398034 -22191254 + AT_rich Low_complexity Low_complexity 1 32 0 387 156 165 28 chr10 123398034 123398143 -22191145 + L2 LINE L2 3189 3312 -1 192 77 0 0 chr10 123399027 123399053 -22190235 + (CA)n Simple_repeat Simple_repeat 1 26 0 1288 244 40 17 chr10 123399672 123400125 -22189163 + L1ME3 LINE L1 5592 5965 -199 616 248 19 63 chr10 123400149 123400273 -22189015 + MER58A DNA MER1_type 26 139 -2281 2189 111 66 84 chr10 123400273 123400338 -22188950 - Tigger2a DNA MER2_type -2274 434 369 2002 120 3 3 chr10 123400338 123400639 -22188649 + AluY SINE Alu 1 301 -10 2189 111 66 84 chr10 123400639 123401015 -22188273 - Tigger2a DNA MER2_type -2339 369 1 616 248 19 63 chr10 123401015 123401096 -22188192 + MER58A DNA MER1_type 139 222 -2 373 227 0 59 chr10 123401102 123401221 -22188067 + L1ME3 LINE L1 6048 6159 -3 2465 37 3 3 chr10 123401281 123401580 -22187708 + AluSp SINE Alu 1 299 -14 273 29 0 0 chr10 123403009 123403043 -22186245 + (TA)n Simple_repeat Simple_repeat 2 35 0 2099 95 0 3 chr10 123403046 123403329 -22185959 - AluSq SINE Alu -31 282 1 519 45 0 0 chr10 123403543 123403609 -22185679 + (CA)n Simple_repeat Simple_repeat 1 66 0 660 111 0 0 chr10 123404406 123404505 -22184783 + (CCA)n Simple_repeat Simple_repeat 1 99 0 261 0 0 0 chr10 123404850 123404879 -22184409 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 2112 125 0 0 chr10 123406322 123406627 -22182661 + AluSq SINE Alu 1 305 -8 219 69 0 0 chr10 123407309 123407338 -22181950 + (CA)n Simple_repeat Simple_repeat 1 29 0 2174 75 3 25 chr10 123407899 123408217 -22181071 + AluSp SINE Alu 1 311 -2 1988 113 0 17 chr10 123408228 123408529 -22180759 + AluSq SINE Alu 1 296 -17 234 0 0 0 chr10 123412002 123412028 -22177260 + (A)n Simple_repeat Simple_repeat 1 26 0 197 128 0 26 chr10 123412050 123412089 -22177199 + (GAAAA)n Simple_repeat Simple_repeat 4 41 0 207 0 0 0 chr10 123412851 123412874 -22176414 + (A)n Simple_repeat Simple_repeat 1 23 0 219 160 20 60 chr10 123417178 123417228 -22172060 + GA-rich Low_complexity Low_complexity 2 49 0 1419 117 0 0 chr10 123417594 123417800 -22171488 + AluSg/x SINE Alu 106 311 -1 1515 192 13 23 chr10 123418080 123418212 -22171076 + AluJo SINE Alu 1 133 -179 2097 103 0 3 chr10 123418212 123418551 -22170737 + AluSx SINE Alu 1 312 0 1515 192 13 23 chr10 123418551 123418752 -22170536 + AluJo SINE Alu 133 312 0 1736 90 63 4 chr10 123418820 123419075 -22170213 - AluSx SINE Alu -7 305 36 195 129 0 0 chr10 123422687 123422718 -22166570 + (T)n Simple_repeat Simple_repeat 1 31 0 296 275 14 0 chr10 123422910 123422979 -22166309 - MLT1G LTR MaLR -520 70 1 219 286 43 14 chr10 123422979 123423049 -22166239 + L2 LINE L2 3185 3256 -16 285 226 75 28 chr10 123423125 123423186 -22166102 - MLT1L LTR MaLR 0 615 545 1817 103 4 0 chr10 123423186 123423438 -22165850 + AluSx SINE Alu 1 253 -59 285 226 75 28 chr10 123423438 123423482 -22165806 - MLT1L LTR MaLR -70 545 505 831 172 6 6 chr10 123423494 123423651 -22165637 + FRAM SINE Alu 15 171 -5 1113 268 83 50 chr10 123423652 123424156 -22165132 - MLT1L LTR MaLR -94 521 1 3112 135 108 70 chr10 123424383 123424451 -22164837 + L1MA7 LINE L1 5542 5606 -685 1891 143 0 13 chr10 123424451 123424766 -22164522 + AluSx SINE Alu 2 312 0 3112 135 108 70 chr10 123424766 123425229 -22164059 + L1MA7 LINE L1 5606 6107 -184 2014 118 3 13 chr10 123425229 123425535 -22163753 + AluSx SINE Alu 1 303 -9 3112 135 108 70 chr10 123425535 123425689 -22163599 + L1MA7 LINE L1 6107 6254 -37 261 0 0 0 chr10 123425689 123425718 -22163570 + (TG)n Simple_repeat Simple_repeat 2 30 0 1528 173 3 36 chr10 123425912 123426218 -22163070 + AluJo SINE Alu 1 296 -16 2304 87 0 0 chr10 123426236 123426534 -22162754 + AluSx SINE Alu 1 298 -14 567 136 0 39 chr10 123426537 123426640 -22162648 + FLAM_A SINE Alu 43 141 -1 1871 144 0 0 chr10 123426660 123426952 -22162336 + AluSx SINE Alu 11 302 -10 1024 158 0 0 chr10 123426952 123427117 -22162171 + AluJb SINE Alu 134 298 -14 1200 119 0 0 chr10 123427117 123427436 -22161852 + (TA)n Simple_repeat Simple_repeat 1 319 0 2217 64 0 7 chr10 123427436 123427716 -22161572 + AluY SINE Alu 25 302 -9 517 296 78 0 chr10 123427919 123428061 -22161227 + MER91A DNA MER1_type 1 153 -43 739 222 259 15 chr10 123428180 123428626 -22160662 - MLT1G1 LTR MaLR -7 588 1 508 306 46 102 chr10 123428643 123429055 -22160233 + L2 LINE L2 2925 3313 0 1892 146 13 7 chr10 123429954 123430256 -22159032 - AluSx SINE Alu -7 305 2 514 169 0 51 chr10 123430261 123430379 -22158909 - Charlie4 DNA MER1_type 0 1961 1850 4531 252 77 31 chr10 123430385 123431623 -22157665 + L1MEc LINE L1 35 1359 -5037 1783 165 0 7 chr10 123431623 123431926 -22157362 + AluJb SINE Alu 1 301 -11 4531 252 77 31 chr10 123431926 123432223 -22157065 + L1MEc LINE L1 1359 1641 -4755 * 5650 151 15 18 chr10 123432215 123433188 -22156100 + L1MC1 LINE L1 5353 6323 -10 2119 97 3 10 chr10 123433188 123433496 -22155792 + AluSg SINE Alu 1 306 -4 2783 213 20 14 chr10 123433499 123434161 -22155127 + L1MEc LINE L1 1619 2284 -4112 2042 132 0 0 chr10 123434161 123434465 -22154823 + AluSx SINE Alu 1 304 -8 230 132 132 59 chr10 123434488 123434556 -22154732 - Charlie4 DNA MER1_type -97 1864 1792 2083 110 0 0 chr10 123434557 123434869 -22154419 + AluSx SINE Alu 1 312 0 216 111 0 0 chr10 123435298 123435334 -22153954 + (T)n Simple_repeat Simple_repeat 1 36 0 223 293 41 41 chr10 123435915 123436038 -22153250 + L2 LINE L2 3149 3271 -1 1283 234 134 18 chr10 123436125 123436305 -22152983 + L1ME3A LINE L1 4968 5126 -1036 2028 110 3 10 chr10 123436305 123436620 -22152668 + AluSx SINE Alu 1 312 0 1283 234 134 18 chr10 123436620 123437149 -22152139 + L1ME3A LINE L1 5126 5769 -393 284 195 184 11 chr10 123437275 123437362 -22151926 + L1ME3A LINE L1 5789 5890 -272 271 149 21 0 chr10 123437393 123437440 -22151848 + AluJ/FRAM SINE Alu 231 278 -24 204 40 0 0 chr10 123437481 123437506 -22151782 + (A)n Simple_repeat Simple_repeat 1 25 0 440 171 0 108 chr10 123437521 123437604 -22151684 + L1ME3A LINE L1 5893 5963 -199 2272 94 0 3 chr10 123437604 123437913 -22151375 + AluSq SINE Alu 1 308 -5 440 171 0 108 chr10 123437913 123437940 -22151348 + L1ME3A LINE L1 5963 5991 -171 589 98 0 14 chr10 123437942 123438060 -22151228 - MER53 DNA DNA 0 189 2 316 241 76 108 chr10 123438083 123438187 -22151101 + L1ME3A LINE L1 6010 6109 -61 2201 78 3 3 chr10 123438187 123438480 -22150808 - AluY SINE Alu -18 293 1 316 241 76 108 chr10 123438480 123438533 -22150755 + L1ME3A LINE L1 6109 6162 -8 1074 127 0 6 chr10 123438535 123438735 -22150553 - AluSg/x SINE Alu 0 325 127 1010 179 10 0 chr10 123438841 123439036 -22150252 + AluSg/x SINE Alu 115 311 -1 2005 185 40 29 chr10 123439130 123439551 -22149737 + MSTA LTR MaLR 1 426 -2 507 299 19 21 chr10 123439571 123439772 -22149516 - MIR3 SINE MIR -53 209 15 796 237 11 21 chr10 123440025 123440211 -22149077 - MER20 DNA MER1_type 0 219 36 2054 112 0 0 chr10 123440330 123440802 -22148486 - AluSx SINE Alu 0 312 9 432 0 0 0 chr10 123440803 123440851 -22148437 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 1778 160 11 0 chr10 123440851 123441132 -22148156 - AluSx SINE Alu -28 284 1 339 297 68 0 chr10 123441393 123441511 -22147777 + MIR SINE MIR 82 207 -55 204 182 45 0 chr10 123442099 123442143 -22147145 + GA-rich Low_complexity Low_complexity 3 48 0 2047 100 7 0 chr10 123442252 123442531 -22146757 - AluSq SINE Alu -32 281 1 399 232 188 29 chr10 123442772 123442910 -22146378 - MIR3 SINE MIR -12 196 37 2037 127 0 0 chr10 123442958 123443285 -22146003 + AluSx SINE Alu 1 327 0 362 248 87 60 chr10 123443287 123443340 -22145948 - L1ME3A LINE L1 -8 6162 6112 2125 93 7 3 chr10 123443340 123443641 -22145647 + AluY SINE Alu 1 302 -9 362 248 87 60 chr10 123443641 123443736 -22145552 - L1ME3A LINE L1 -58 6112 6010 582 98 0 14 chr10 123443759 123443877 -22145411 + MER53 DNA DNA 2 189 0 1393 138 0 5 chr10 123443906 123444130 -22145158 - AluSq SINE Alu -5 308 86 253 301 72 0 chr10 123444977 123445060 -22144228 - L2 LINE L2 0 3313 3225 570 313 84 55 chr10 123445253 123445382 -22143906 - MLT1K LTR MaLR -17 571 447 2033 120 10 3 chr10 123445382 123445682 -22143606 + AluSq SINE Alu 1 302 -11 570 313 84 55 chr10 123445682 123445990 -22143298 - MLT1K LTR MaLR -141 447 121 419 271 55 28 chr10 123446555 123446674 -22142614 - MLT1I LTR MaLR -217 192 65 2474 17 40 7 chr10 123446674 123446974 -22142314 + AluY SINE Alu 1 310 -1 419 271 55 28 chr10 123446974 123447035 -22142253 - MLT1I LTR MaLR -344 65 7 188 295 90 13 chr10 123448294 123448372 -22140916 - L2 LINE L2 -25 3247 3164 297 0 0 0 chr10 123450402 123450435 -22138853 + (CA)n Simple_repeat Simple_repeat 1 33 0 24 0 0 0 chr10 123454022 123454046 -22135242 + AT_rich Low_complexity Low_complexity 1 24 0 246 62 0 0 chr10 123455529 123455561 -22133727 + (GGAA)n Simple_repeat Simple_repeat 3 34 0 349 205 167 0 chr10 123458092 123458170 -22131118 - L2 LINE L2 0 3272 3182 432 333 7 26 chr10 123459124 123459314 -22129974 - MIR3 SINE MIR -7 201 15 2111 90 4 0 chr10 123459556 123459824 -22129464 + AluSx SINE Alu 1 269 -43 452 256 6 70 chr10 123459974 123460130 -22129158 + MIR3 SINE MIR 51 196 -12 2446 235 91 19 chr10 123460254 123460981 -22128307 + MER45C DNA AcHobo 1 779 -174 1386 171 116 0 chr10 123461086 123461378 -22127910 + MER45B DNA AcHobo 715 1040 0 201 39 0 0 chr10 123462164 123462190 -22127098 + (TGAA)n Simple_repeat Simple_repeat 2 27 0 366 292 51 15 chr10 123463227 123463364 -22125924 + MIR SINE MIR 51 192 -70 26 48 0 32 chr10 123463628 123463663 -22125625 + AT_rich Low_complexity Low_complexity 1 36 -24 2369 60 3 0 chr10 123463663 123463966 -22125322 - AluY SINE Alu 0 304 1 26 48 0 32 chr10 123463966 123463991 -22125297 + AT_rich Low_complexity Low_complexity 36 60 0 936 128 0 8 chr10 123463993 123464126 -22125162 + FLAM_C SINE Alu 2 133 0 2184 118 7 3 chr10 123464425 123464729 -22124559 + AluSx SINE Alu 1 305 -7 2469 77 0 0 chr10 123465310 123465607 -22123681 + AluSc SINE Alu 1 297 -12 183 280 140 37 chr10 123465872 123465979 -22123309 + L2 LINE L2 3136 3253 -19 486 245 54 87 chr10 123466090 123466248 -22123040 - MIR SINE MIR -79 183 30 2340 105 0 0 chr10 123466248 123466544 -22122744 + AluSg SINE Alu 1 296 -14 486 245 54 87 chr10 123466544 123466569 -22122719 - MIR SINE MIR -232 30 6 208 214 14 57 chr10 123466611 123466681 -22122607 - MIR SINE MIR -104 158 92 2251 117 3 0 chr10 123467555 123467854 -22121434 + AluSp SINE Alu 1 300 -13 300 129 300 0 chr10 123467856 123467926 -22121362 - MER53 DNA DNA -2 187 97 402 223 75 11 chr10 123468005 123468099 -22121189 - MIR SINE MIR -157 105 6 526 219 76 0 chr10 123468157 123468276 -22121012 + MIR SINE MIR 97 224 -38 2082 152 0 13 chr10 123468777 123469092 -22120196 - AluJb SINE Alu 0 312 2 1764 167 3 23 chr10 123469369 123469669 -22119619 + AluJo SINE Alu 1 294 -18 300 294 65 11 chr10 123469736 123469828 -22119460 + MIR SINE MIR 19 115 -93 2314 121 0 3 chr10 123469830 123470143 -22119145 - AluSx SINE Alu 0 312 1 510 250 7 14 chr10 123470192 123470336 -22118952 - MLT1K LTR MaLR 0 588 446 601 296 41 10 chr10 123470505 123470701 -22118587 - MLT1K LTR MaLR -359 229 28 904 178 0 0 chr10 123470890 123471025 -22118263 - AluJo SINE Alu -177 135 1 360 172 0 11 chr10 123472122 123472209 -22117079 + L1MB8 LINE L1 6093 6178 0 205 261 0 0 chr10 123573597 123573662 -22015626 + T-rich Low_complexity Low_complexity 1 65 0 223 254 0 0 chr10 123573863 123573918 -22015370 + T-rich Low_complexity Low_complexity 1 55 0 275 260 0 0 chr10 123574114 123574187 -22015101 + T-rich Low_complexity Low_complexity 1 73 0 296 175 16 0 chr10 123574556 123574619 -22014669 + CT-rich Low_complexity Low_complexity 1 64 0 280 288 0 0 chr10 123575090 123575201 -22014087 + T-rich Low_complexity Low_complexity 1 111 0 217 323 23 15 chr10 123576500 123576633 -22012655 + CT-rich Low_complexity Low_complexity 2 135 0 657 178 0 16 chr10 123577740 123577869 -22011419 + FLAM_C SINE Alu 1 127 -6 1983 145 0 3 chr10 123578388 123578677 -22010611 + AluJb SINE Alu 12 299 -13 229 244 64 0 chr10 123578715 123578793 -22010495 + (CATATA)n Simple_repeat Simple_repeat 5 87 0 226 293 117 42 chr10 123579004 123579414 -22009874 - L1 LINE L1 -2051 4095 3655 240 183 32 111 chr10 123579493 123579619 -22009669 + MER113 DNA MER1_type? 6 121 -400 2154 110 7 7 chr10 123579861 123580160 -22009128 - AluSp SINE Alu -14 299 1 326 132 58 16 chr10 123580325 123580446 -22008842 + (TA)n Simple_repeat Simple_repeat 1 126 0 931 150 70 43 chr10 123580539 123580726 -22008562 - AluJo SINE Alu -120 192 1 5971 93 28 24 chr10 123581567 123582519 -22006769 + L1PA10 LINE L1 5202 6156 -12 40 21 0 0 chr10 123582525 123582572 -22006716 + AT_rich Low_complexity Low_complexity 1 47 0 1321 161 79 48 chr10 123583123 123583415 -22005873 + AluJb SINE Alu 1 301 -11 1743 148 0 23 chr10 123583729 123584032 -22005256 + AluJo SINE Alu 1 296 -16 21 36 0 0 chr10 123584090 123584118 -22005170 + AT_rich Low_complexity Low_complexity 1 28 0 2156 93 3 20 chr10 123584554 123584854 -22004434 - AluSp SINE Alu -14 299 5 404 304 57 0 chr10 123585000 123585158 -22004130 - MIR SINE MIR -2 260 94 2139 98 0 19 chr10 123585160 123585475 -22003813 + AluY SINE Alu 1 309 -2 2350 106 0 0 chr10 123585516 123585827 -22003461 + AluSx SINE Alu 1 311 -1 1500 91 10 14 chr10 123586390 123586598 -22002690 - AluSg/x SINE Alu -17 293 87 282 216 27 63 chr10 123586781 123586892 -22002396 + HAL1 LINE L1 2249 2355 -152 843 248 119 12 chr10 123587155 123587490 -22001798 + MLT1J1 LTR MaLR 76 446 0 200 343 0 14 chr10 123587714 123587784 -22001504 - MER91A DNA MER1_type -127 69 1 505 300 44 62 chr10 123588226 123588272 -22001016 + LTR16B LTR ERVL 10 55 -395 1459 159 51 80 chr10 123588272 123588389 -22000899 + AluJb SINE Alu 3 122 -190 1911 134 43 10 chr10 123588389 123588688 -22000600 + AluSx SINE Alu 2 310 -2 1459 159 51 80 chr10 123588688 123588884 -22000404 + AluJb SINE Alu 122 307 -5 505 300 44 62 chr10 123588884 123589228 -22000060 + LTR16B LTR ERVL 55 367 -83 642 221 0 0 chr10 123589684 123589806 -21999482 + FLAM_A SINE Alu 1 122 -11 218 186 0 0 chr10 123590541 123590584 -21998704 + MIR SINE MIR 91 133 -75 2226 256 133 26 chr10 123592396 123593540 -21995748 + L2 LINE L2 1958 3221 -92 1319 193 55 78 chr10 123594591 123594776 -21994512 + MLT1B LTR MaLR 1 189 -201 2015 87 18 11 chr10 123594776 123595086 -21994202 + AluSc SINE Alu 10 309 0 1319 193 55 78 chr10 123595086 123595299 -21993989 + MLT1B LTR MaLR 189 390 0 1989 132 11 0 chr10 123595414 123595717 -21993571 - AluSx SINE Alu 0 306 1 1641 78 0 18 chr10 123595756 123595974 -21993314 - AluSq SINE Alu -99 214 1 436 153 28 0 chr10 123596244 123596316 -21992972 - Tigger5 DNA MER2_type 0 2323 2250 * 1289 204 97 7 chr10 123596313 123596592 -21992696 - Tigger5 DNA MER2_type -2019 304 1 377 160 25 142 chr10 123597055 123597092 -21992196 + AluSp SINE Alu 137 177 -126 2200 63 11 4 chr10 123597092 123597360 -21991928 - AluSp SINE Alu -16 297 28 377 160 25 142 chr10 123597360 123597463 -21991825 + AluSp SINE Alu 177 218 -85 2243 79 0 44 chr10 123597465 123597781 -21991507 + AluY SINE Alu 3 304 -7 415 270 141 0 chr10 123597816 123598001 -21991287 - MIR SINE MIR -1 261 51 1603 173 48 9 chr10 123598004 123598501 -21990787 - MER68 LTR ERV1 -10 552 3 189 256 0 0 chr10 123598503 123598542 -21990746 - MIR SINE MIR -207 55 17 341 234 9 19 chr10 123598564 123598671 -21990617 + L1MC/D LINE L1 5709 5814 -1994 2106 93 0 20 chr10 123598733 123599035 -21990253 + AluSq SINE Alu 1 296 -17 1328 153 5 5 chr10 123599305 123599508 -21989780 + AluJo SINE Alu 86 288 -24 1635 188 3 24 chr10 123599705 123600003 -21989285 - AluJo SINE Alu -16 296 5 1002 187 67 30 chr10 123600061 123600361 -21988927 - L1MC5 LINE L1 -48 7913 7603 2136 92 44 14 chr10 123600390 123600684 -21988604 + AluSp SINE Alu 1 303 -10 4864 127 48 50 chr10 123600693 123600837 -21988451 + L1MC2 LINE L1 5442 5585 -759 1771 101 7 49 chr10 123600837 123601144 -21988144 - AluSq SINE Alu 0 305 11 4864 127 48 50 chr10 123601144 123601901 -21987387 + L1MC2 LINE L1 5585 6342 -2 768 272 123 50 chr10 123601953 123602417 -21986871 + MLT1L LTR MaLR 1 498 -117 245 317 28 29 chr10 123602508 123602664 -21986624 - MIR SINE MIR -78 130 3 545 254 0 45 chr10 123603037 123603171 -21986117 + FLAM_A SINE Alu 1 128 -5 2090 122 0 25 chr10 123603322 123603642 -21985646 + AluJo SINE Alu 1 312 0 1939 101 52 14 chr10 123604128 123604415 -21984873 - AluSx SINE Alu -12 300 3 1396 145 0 9 chr10 123604418 123604632 -21984656 - AluJb SINE Alu -14 298 87 1249 138 4 77 chr10 123604746 123604759 -21984529 - AluSg/x SINE Alu -9 303 291 306 151 0 0 chr10 123604759 123604812 -21984476 - L1MB3 LINE L1 -1 6182 6130 1249 138 4 77 chr10 123604812 123605044 -21984244 - AluSg/x SINE Alu -21 291 76 2700 161 55 14 chr10 123605044 123605554 -21983734 - L1MB3 LINE L1 -51 6132 5602 684 252 29 38 chr10 123606074 123606312 -21982976 + L1MB7 LINE L1 5949 6184 0 1879 104 0 28 chr10 123607915 123608224 -21981064 + AluSg SINE Alu 5 305 0 591 172 35 9 chr10 123608420 123608536 -21980752 + L2 LINE L2 3195 3313 0 412 274 26 37 chr10 123609024 123609294 -21979994 + L1PB4 LINE L1 5655 5921 -235 * 3605 108 37 18 chr10 123609058 123609624 -21979664 + L1MC1 LINE L1 5690 6266 -67 1528 162 23 39 chr10 123609645 123609953 -21979335 + AluJo SINE Alu 1 303 -9 1951 144 6 16 chr10 123609954 123610266 -21979022 + AluSx SINE Alu 1 309 -3 345 319 56 0 chr10 123610458 123610602 -21978686 - MIR SINE MIR -29 233 82 277 238 24 63 chr10 123611144 123611270 -21978018 + L1MC4 LINE L1 5817 5937 -1871 2101 100 0 51 chr10 123611491 123611802 -21977486 - AluSg SINE Alu -13 297 3 198 211 0 0 chr10 123611994 123612032 -21977256 - MIR SINE MIR -160 102 65 1486 165 14 45 chr10 123612192 123612483 -21976805 + AluJb SINE Alu 4 285 -27 852 152 0 0 chr10 123613202 123613334 -21975954 + FLAM_A SINE Alu 1 132 -1 586 239 16 60 chr10 123613649 123613900 -21975388 + L1MC4 LINE L1 6461 6700 -1342 1546 261 62 13 chr10 123613959 123614426 -21974862 + Zaphod DNA AcHobo 158 647 -3384 6095 215 43 79 chr10 123614694 123614928 -21974360 + L1M4 LINE L1 3121 3362 -2784 2317 72 0 0 chr10 123614928 123615206 -21974082 + AluY SINE Alu 1 278 -33 384 22 0 0 chr10 123615210 123615255 -21974033 + (TAAA)n Simple_repeat Simple_repeat 3 47 0 6095 215 43 79 chr10 123615255 123615428 -21973860 + L1M4 LINE L1 3365 3543 -2603 216 0 0 0 chr10 123615428 123615452 -21973836 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 6095 215 43 79 chr10 123615452 123616022 -21973266 + L1M4 LINE L1 3543 4132 -2014 2308 88 3 19 chr10 123616022 123616339 -21972949 + AluSx SINE Alu 1 312 0 6095 215 43 79 chr10 123616339 123616497 -21972791 + L1M4 LINE L1 4132 4294 -1852 1852 150 41 3 chr10 123616497 123616791 -21972497 + AluSx SINE Alu 1 305 -7 6095 215 43 79 chr10 123616791 123617434 -21971854 + L1M4 LINE L1 4294 4959 -1187 1494 162 79 25 chr10 123617434 123617712 -21971576 - AluJo SINE Alu -19 293 1 6095 215 43 79 chr10 123617712 123617935 -21971353 + L1M4 LINE L1 4959 5188 -958 1994 128 0 14 chr10 123617935 123618225 -21971063 + AluSx SINE Alu 1 286 -26 6095 215 43 79 chr10 123618225 123618239 -21971049 + L1M4 LINE L1 5188 5201 -945 212 0 36 0 chr10 123618239 123618267 -21971021 + (CAA)n Simple_repeat Simple_repeat 2 30 0 6095 215 43 79 chr10 123618267 123618507 -21970781 + L1M4 LINE L1 5201 5448 -698 2318 60 3 35 chr10 123618507 123618825 -21970463 + AluY SINE Alu 1 308 -3 1558 155 75 14 chr10 123618827 123619105 -21970183 + AluJo SINE Alu 1 295 -17 6095 215 43 79 chr10 123619105 123619119 -21970169 + L1M4 LINE L1 5310 5323 -823 310 225 131 21 chr10 123619121 123619312 -21969976 + Zaphod DNA AcHobo 870 1081 -2950 501 197 44 22 chr10 123619333 123619470 -21969818 + Zaphod DNA AcHobo 1214 1353 -2678 225 231 19 0 chr10 123619476 123619528 -21969760 + MER115 DNA AcHobo 641 693 0 1565 239 94 16 chr10 123619587 123620089 -21969199 + MER20B DNA MER1_type 235 775 -8 1004 188 0 0 chr10 123620402 123620572 -21968716 + FRAM SINE Alu 1 170 -6 511 188 0 0 chr10 123621545 123621630 -21967658 + U6 snRNA snRNA 22 106 -1 216 182 0 0 chr10 123621715 123621759 -21967529 + GA-rich Low_complexity Low_complexity 3 46 0 1353 209 40 0 chr10 123622219 123622515 -21966773 + L1MB3 LINE L1 5723 6030 -153 297 244 171 0 chr10 123622512 123622594 -21966694 + L1MB1 LINE L1 6045 6140 -28 * 1329 185 27 56 chr10 123622650 123622816 -21966472 + Tigger5 DNA MER2_type 1 170 -2153 2546 51 0 10 chr10 123622816 123623128 -21966160 - AluY SINE Alu -2 309 1 1329 185 27 56 chr10 123623128 123623414 -21965874 + Tigger5 DNA MER2_type 170 2322 -1 543 274 30 30 chr10 123624103 123624271 -21965017 + MIR SINE MIR 90 257 -5 188 289 79 0 chr10 123624381 123624457 -21964831 + MIR SINE MIR 83 164 -98 3046 153 44 7 chr10 123625025 123625567 -21963721 + L1MB3 LINE L1 5621 6182 -1 685 282 134 20 chr10 123625584 123625935 -21963353 + L2 LINE L2 2512 2902 -412 463 221 44 0 chr10 123626034 123626147 -21963141 + L2 LINE L2 3196 3313 0 1530 126 160 8 chr10 123626430 123626692 -21962596 + AluJo SINE Alu 1 302 0 787 247 139 75 chr10 123627528 123627672 -21961616 - Tigger8 DNA MER2_type -167 499 366 2067 111 14 7 chr10 123627672 123627961 -21961327 - AluSx SINE Alu -20 292 2 787 247 139 75 chr10 123627961 123627995 -21961293 - Tigger8 DNA MER2_type -300 366 336 1598 129 13 0 chr10 123627995 123628228 -21961060 - MER46A DNA MER2_type 0 236 1 787 247 139 75 chr10 123628228 123628514 -21960774 - Tigger8 DNA MER2_type -330 336 4 1972 88 39 32 chr10 123628538 123628846 -21960442 + AluSp SINE Alu 1 310 -3 482 279 161 44 chr10 123629500 123629947 -21959341 - L1MC4a LINE L1 -1890 5918 5386 1713 154 7 18 chr10 123629947 123630267 -21959021 - AluJb SINE Alu 0 317 1 482 279 161 44 chr10 123630267 123630390 -21958898 - L1MC4a LINE L1 -2422 5386 5279 1211 133 41 31 chr10 123630390 123630586 -21958702 - AluJo SINE Alu -114 198 1 330 295 186 13 chr10 123630586 123630898 -21958390 - L1MC4a LINE L1 -838 5308 4943 725 164 45 156 chr10 123631116 123631360 -21957928 - MER20 DNA MER1_type 0 219 3 2518 74 0 3 chr10 123631707 123632019 -21957269 + AluY SINE Alu 1 311 0 332 286 43 52 chr10 123632349 123632580 -21956708 - L1MC4a LINE L1 -2177 3969 3741 2029 95 7 20 chr10 123632588 123632910 -21956378 - AluSg SINE Alu 0 310 1 2374 96 0 10 chr10 123633617 123633929 -21955359 + AluSc SINE Alu 1 309 0 202 231 250 19 chr10 123637396 123637504 -21951784 + L2 LINE L2 3181 3313 0 1216 181 82 48 chr10 123638022 123638314 -21950974 + AluJo SINE Alu 1 302 0 566 230 59 13 chr10 123639050 123639202 -21950086 + L1ME3 LINE L1 5444 5602 -560 1703 201 106 37 chr10 123639339 123639851 -21949437 + L1ME3 LINE L1 5614 6160 -2 861 139 85 0 chr10 123639969 123640134 -21949154 - L1MB4 LINE L1 -2 6178 6000 972 177 54 27 chr10 123640166 123640352 -21948936 - AluJo SINE Alu -16 296 106 1084 112 0 7 chr10 123640356 123640499 -21948789 + AluSq/x SINE Alu 1 142 -171 1625 120 17 0 chr10 123640500 123640733 -21948555 + AluSg/x SINE Alu 73 309 -1 719 140 18 0 chr10 123640740 123640854 -21948434 - AluJo SINE Alu -195 117 2 1831 116 53 33 chr10 123641013 123641315 -21947973 - AluSx SINE Alu 0 312 5 2377 93 54 23 chr10 123641373 123641726 -21947562 - THE1B LTR MaLR 0 364 1 1326 167 33 29 chr10 123642862 123643102 -21946186 + AluJo SINE Alu 42 282 -30 2312 96 6 13 chr10 123643453 123643767 -21945521 - AluSx SINE Alu 0 312 1 847 232 24 19 chr10 123645148 123645371 -21943917 + MIR SINE MIR 27 248 -14 186 255 20 0 chr10 123645537 123645588 -21943700 + MIR SINE MIR 89 140 -68 277 211 0 0 chr10 123646440 123646492 -21942796 - MER5A DNA MER1_type -6 183 132 294 273 13 13 chr10 123646535 123646612 -21942676 + MLT1K LTR MaLR 510 586 -2 6566 50 1 14 chr10 123646791 123647628 -21941660 + L1PA8 LINE L1 5341 6166 -6 1303 131 29 10 chr10 123648217 123648423 -21940865 - MER2 DNA MER2_type -135 210 1 1931 113 38 69 chr10 123648569 123648887 -21940401 - AluSx SINE Alu -4 308 1 312 337 78 16 chr10 123649156 123649334 -21939954 - MIR SINE MIR -61 147 1 391 290 35 41 chr10 123649350 123649495 -21939793 - L2 LINE L2 -6 3266 3123 996 237 207 63 chr10 123649589 123650269 -21939019 - L2 LINE L2 -346 2968 2191 1288 263 35 63 chr10 123650283 123650805 -21938483 + MER20B DNA MER1_type 1 507 -276 331 222 22 22 chr10 123650861 123650951 -21938337 + MER20B DNA MER1_type 640 729 -54 188 344 22 11 chr10 123650979 123651069 -21938219 - L2 LINE L2 -1134 2180 2090 189 230 40 27 chr10 123651102 123651176 -21938112 - L2 LINE L2 -1322 1992 1918 232 284 0 34 chr10 123652409 123652497 -21936791 + MIR3 SINE MIR 104 188 -20 1167 142 0 33 chr10 123653445 123653628 -21935660 + AluJo SINE Alu 3 179 -133 21 0 0 0 chr10 123653655 123653676 -21935612 + AT_rich Low_complexity Low_complexity 1 21 0 1740 160 6 31 chr10 123654334 123654653 -21934635 + AluSx SINE Alu 1 311 -1 222 300 53 77 chr10 123654941 123654972 -21934316 - MIR SINE MIR -85 177 147 1476 171 123 27 chr10 123654972 123655305 -21933983 + MLT1A1 LTR MaLR 1 365 0 222 300 53 77 chr10 123655305 123655443 -21933845 - MIR SINE MIR -115 147 12 527 233 129 0 chr10 123656830 123656993 -21932295 + MER20 DNA MER1_type 32 215 -4 262 193 34 76 chr10 123657985 123658104 -21931184 - LTR33 LTR ERVL -31 490 377 214 227 72 41 chr10 123658483 123658580 -21930708 + L2 LINE L2 2377 2476 -838 1791 170 7 7 chr10 123658796 123659090 -21930198 - AluJb SINE Alu -18 294 1 1772 176 28 14 chr10 123659342 123659701 -21929587 - MLT1A1 LTR MaLR -1 364 1 440 249 100 102 chr10 123659983 123660131 -21929157 + L2 LINE L2 2566 2713 -600 391 83 0 69 chr10 123660131 123660203 -21929085 + L1MB2 LINE L1 6101 6167 -4 440 249 100 102 chr10 123660203 123660808 -21928480 + L2 LINE L2 2713 3309 -4 950 194 3 95 chr10 123663716 123664010 -21925278 + L1ME1 LINE L1 5001 5267 -879 2135 97 3 32 chr10 123664046 123664356 -21924932 - AluSq SINE Alu -12 301 1 2397 180 42 47 chr10 123664411 123665028 -21924260 + L1ME1 LINE L1 5290 5903 -263 196 290 87 0 chr10 123665316 123665385 -21923903 + L2 LINE L2 3238 3312 -1 447 19 0 0 chr10 123665505 123665557 -21923731 + (CGAA)n Simple_repeat Simple_repeat 2 53 0 1297 139 13 35 chr10 123665662 123665892 -21923396 + MLT1B LTR MaLR 2 226 -164 1394 144 24 24 chr10 123665917 123666167 -21923121 - AluJo SINE Alu -27 285 36 471 181 9 52 chr10 123666168 123666284 -21923004 + MLT1B LTR MaLR 280 390 0 274 295 92 40 chr10 123666877 123667128 -21922160 + L2 LINE L2 2624 2887 -427 338 282 38 23 chr10 123667203 123667334 -21921954 - L2 LINE L2 0 3272 3140 234 282 104 31 chr10 123668747 123668910 -21920378 + L2 LINE L2 3137 3311 -2 1615 171 39 11 chr10 123668961 123669242 -21920046 + AluJo SINE Alu 1 289 -23 26 98 0 0 chr10 123669764 123669846 -21919442 + AT_rich Low_complexity Low_complexity 1 82 0 523 329 41 17 chr10 123669900 123670244 -21919044 - L1ME LINE L1 -500 5621 5270 379 210 0 109 chr10 123670559 123670697 -21918591 - MIR SINE MIR -37 225 103 2132 127 3 6 chr10 123670802 123671116 -21918172 + AluSq SINE Alu 1 313 0 581 284 12 31 chr10 123671808 123672065 -21917223 + L1ME4a LINE L1 5569 5820 -301 1766 172 0 27 chr10 123672078 123672375 -21916913 + AluSx SINE Alu 1 289 -23 1080 170 51 125 chr10 123672462 123672627 -21916661 - AluJo SINE Alu -13 289 156 1531 205 0 17 chr10 123672627 123672925 -21916363 - AluJo SINE Alu -17 295 3 1080 170 51 125 chr10 123672925 123673070 -21916218 - AluJo SINE Alu -146 156 2 413 331 33 5 chr10 123673161 123673345 -21915943 + MIR SINE MIR 21 209 -53 1998 143 0 7 chr10 123673392 123673685 -21915603 + AluSx SINE Alu 1 291 -21 211 173 39 0 chr10 123675101 123675153 -21914135 + CT-rich Low_complexity Low_complexity 2 55 0 433 279 67 71 chr10 123676249 123676503 -21912785 - MLT1K LTR MaLR -1 587 335 261 217 150 17 chr10 123676778 123676898 -21912390 + L1ME4a LINE L1 5975 6110 -11 249 57 0 0 chr10 123677246 123677281 -21912007 + (CA)n Simple_repeat Simple_repeat 2 36 0 932 176 6 44 chr10 123677451 123677633 -21911655 + FAM SINE Alu 1 175 0 414 299 52 19 chr10 123677878 123678089 -21911199 + L1ME4a LINE L1 5606 5823 -298 2633 201 26 74 chr10 123678129 123678967 -21910321 + L1MB7 LINE L1 3729 4526 -1620 3711 197 36 35 chr10 123678968 123679365 -21909923 + L1MB7 LINE L1 4784 5179 -1005 2128 112 46 20 chr10 123679365 123679713 -21909575 + L1PA14 LINE L1 5804 6160 -1 3711 197 36 35 chr10 123679713 123680417 -21908871 + L1MB7 LINE L1 5179 5894 -290 1598 158 75 11 chr10 123680417 123680696 -21908592 + AluJb SINE Alu 1 297 -15 3711 197 36 35 chr10 123680696 123680982 -21908306 + L1MB7 LINE L1 5894 6178 -6 211 212 24 24 chr10 123680983 123681068 -21908220 + (TA)n Simple_repeat Simple_repeat 2 86 0 1640 122 8 8 chr10 123681238 123681475 -21907813 + AluSx SINE Alu 1 237 -75 335 221 77 0 chr10 123681510 123681614 -21907674 + L1ME4a LINE L1 5999 6110 -11 1403 173 40 60 chr10 123681632 123681933 -21907355 + AluJb SINE Alu 1 295 -17 209 120 40 0 chr10 123682661 123682711 -21906577 + (TAGA)n Simple_repeat Simple_repeat 3 54 0 4128 171 95 33 chr10 123682750 123683594 -21905694 + MER21A LTR ERV1 36 931 0 281 245 76 43 chr10 123685167 123685351 -21903937 + L1MC/D LINE L1 3129 3318 -2828 340 241 79 8 chr10 123685406 123685647 -21903641 + L1MC/D LINE L1 5285 5546 -752 2127 118 3 7 chr10 123685731 123686028 -21903260 + AluSx SINE Alu 1 296 -16 1585 181 18 21 chr10 123686057 123686339 -21902949 + AluJo SINE Alu 1 281 -31 2178 81 27 20 chr10 123686448 123686746 -21902542 - AluY SINE Alu -11 300 1 290 163 0 0 chr10 123686931 123686980 -21902308 + L2 LINE L2 3264 3312 -1 2094 100 0 17 chr10 123687384 123687675 -21901613 + AluSx SINE Alu 18 303 -9 838 169 0 7 chr10 123688248 123688384 -21900904 - AluJo SINE Alu -177 135 1 221 71 0 0 chr10 123688862 123688890 -21900398 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 1087 120 33 38 chr10 123688893 123689077 -21900211 - AluJo SINE Alu -30 282 100 2598 140 120 35 chr10 123689259 123689626 -21899662 + MER1A DNA MER1_type 1 420 -2280 2327 73 6 22 chr10 123689626 123689942 -21899346 + AluY SINE Alu 1 311 0 2598 140 120 35 chr10 123689942 123690059 -21899229 + MER1A DNA MER1_type 420 526 -1 1652 142 0 105 chr10 123690107 123690432 -21898856 - AluJb SINE Alu -21 291 1 1782 175 10 7 chr10 123690992 123691295 -21897993 + AluJo SINE Alu 1 304 -8 2457 66 0 25 chr10 123691310 123691629 -21897659 - AluY SINE Alu 0 311 1 30 45 0 0 chr10 123691924 123691968 -21897320 + AT_rich Low_complexity Low_complexity 1 44 0 37 0 0 0 chr10 123692535 123692572 -21896716 + AT_rich Low_complexity Low_complexity 1 37 0 2302 79 20 128 chr10 123693281 123693434 -21895854 + L1MB1 LINE L1 5451 5619 -549 2302 149 11 62 chr10 123693434 123693903 -21895385 + L1MB1 LINE L1 5721 6167 -1 2302 79 20 128 chr10 123693903 123693919 -21895369 + L1MB1 LINE L1 5619 6167 -1 1269 149 68 27 chr10 123693919 123694141 -21895147 + AluJb SINE Alu 68 298 -14 240 395 22 0 chr10 123694595 123694729 -21894559 - L2 LINE L2 -583 2731 2595 2160 195 98 34 chr10 123694882 123695415 -21893873 - MLT1F1 LTR MaLR 0 567 1 545 293 35 39 chr10 123696743 123696975 -21892313 - MIR SINE MIR -13 249 19 410 273 182 0 chr10 123697053 123697229 -21892059 + L2 LINE L2 3106 3313 0 2034 121 7 4 chr10 123697361 123697642 -21891646 + AluSq SINE Alu 1 282 -31 985 44 15 7 chr10 123697647 123697782 -21891506 + (GAAA)n Simple_repeat Simple_repeat 4 139 0 600 121 0 10 chr10 123698602 123698701 -21890587 - L1PA5 LINE L1 0 6154 6057 1952 103 22 29 chr10 123698730 123699041 -21890247 + AluSp SINE Alu 5 313 0 899 246 43 82 chr10 123699272 123699428 -21889860 + L1MC/D LINE L1 5255 5415 -2393 523 159 196 9 chr10 123699428 123699535 -21889753 - FLAM_A SINE Alu -6 127 1 899 246 43 82 chr10 123699535 123699792 -21889496 + L1MC/D LINE L1 5415 5652 -2156 1791 138 48 10 chr10 123699947 123700236 -21889052 - AluJo SINE Alu -12 300 1 2512 70 0 3 chr10 123700428 123700726 -21888562 + AluY SINE Alu 1 297 -14 389 325 98 33 chr10 123700988 123701009 -21888279 + HAL1b LINE L1 89 107 -1241 1975 72 0 12 chr10 123701009 123701260 -21888028 + AluY SINE Alu 43 290 -21 389 325 98 33 chr10 123701260 123701696 -21887592 + HAL1b LINE L1 107 576 -772 315 248 66 22 chr10 123701827 123701964 -21887324 + L2 LINE L2 2574 2716 -598 730 309 83 33 chr10 123702051 123702471 -21886817 + L2 LINE L2 2872 3312 -1 30 45 0 0 chr10 123702587 123702631 -21886657 + AT_rich Low_complexity Low_complexity 1 44 0 639 198 8 8 chr10 123702645 123702766 -21886522 + FLAM_A SINE Alu 4 124 -9 403 264 107 30 chr10 123703404 123703659 -21885629 + L1PB4 LINE L1 5576 5859 -272 197 373 71 8 chr10 123704878 123705004 -21884284 - L2 LINE L2 -14 3258 3125 1334 277 88 10 chr10 123705154 123705652 -21883636 + L1MC4 LINE L1 6784 7320 -722 8741 186 94 76 chr10 123705912 123707015 -21882273 + L1MDa LINE L1 3 1085 -5636 2327 75 13 10 chr10 123707015 123707320 -21881968 + AluY SINE Alu 1 306 -5 8741 186 94 76 chr10 123707320 123707398 -21881890 + L1MDa LINE L1 1085 1160 -5561 2279 77 3 27 chr10 123707398 123707695 -21881593 + AluSp SINE Alu 1 290 -23 8741 186 94 76 chr10 123707695 123709092 -21880196 + L1MDa LINE L1 1160 2681 -4040 1894 140 17 20 chr10 123709092 123709392 -21879896 + AluSx SINE Alu 1 299 -13 8741 186 94 76 chr10 123709392 123709546 -21879742 + L1MDa LINE L1 2681 2831 -3890 873 219 41 12 chr10 123709556 123709802 -21879486 + L1MDa LINE L1 2897 3149 -3391 793 181 33 86 chr10 123709782 123710025 -21879263 + L1MB8 LINE L1 5949 6178 0 * 1633 230 97 52 chr10 123710025 123710255 -21879033 + L1MDa LINE L1 3143 3361 -3179 1940 102 20 23 chr10 123710255 123710558 -21878730 + AluSg SINE Alu 1 302 -8 1633 230 97 52 chr10 123710558 123711041 -21878247 + L1MDa LINE L1 3361 3888 -2652 634 232 0 7 chr10 123711230 123711368 -21877920 + L1MDa LINE L1 3898 4034 -2506 365 270 11 0 chr10 123711368 123711457 -21877831 + MER66A LTR ERV1 248 337 -141 1132 110 7 7 chr10 123711512 123711666 -21877622 + AluSq SINE Alu 1 154 -159 1180 187 48 44 chr10 123711686 123712001 -21877287 + L1MDa LINE L1 4078 4393 -2147 1741 123 9 82 chr10 123712224 123712540 -21876748 + AluJo SINE Alu 11 303 -9 613 198 193 32 chr10 123713594 123713781 -21875507 + MER20 DNA MER1_type 1 217 -2 549 217 147 16 chr10 123713833 123713984 -21875304 - FRAM SINE Alu 0 168 1 2353 94 0 0 chr10 123714016 123714315 -21874973 + AluSq SINE Alu 11 309 -4 2273 92 0 0 chr10 123714703 123714987 -21874301 + AluSx SINE Alu 21 304 -8 1723 191 0 0 chr10 123714987 123715264 -21874024 - AluJo SINE Alu -31 281 4 2112 122 19 77 chr10 123716175 123716519 -21872769 - L1MB8 LINE L1 -28 6150 5834 1899 120 65 0 chr10 123716519 123716688 -21872600 - AluSx SINE Alu -1 311 114 446 0 0 18 chr10 123716688 123716743 -21872545 + (TTTA)n Simple_repeat Simple_repeat 2 55 0 1899 120 65 0 chr10 123716743 123716865 -21872423 - AluSx SINE Alu -198 114 1 2112 122 19 77 chr10 123716865 123716947 -21872341 - L1MB8 LINE L1 -344 5834 5749 1355 152 140 30 chr10 123717232 123717496 -21871792 - AluJo SINE Alu -13 299 7 2318 110 0 3 chr10 123717655 123717963 -21871325 - AluSx SINE Alu -5 307 1 2160 118 3 0 chr10 123718494 123718783 -21870505 - AluSx SINE Alu -19 293 4 254 123 27 27 chr10 123718869 123718942 -21870346 + (CA)n Simple_repeat Simple_repeat 2 74 0 2114 91 0 39 chr10 123720670 123720956 -21868332 - AluSx SINE Alu -26 286 12 198 0 0 0 chr10 123721427 123721449 -21867839 + (TG)n Simple_repeat Simple_repeat 1 22 0 306 0 0 0 chr10 123722089 123722123 -21867165 + (CA)n Simple_repeat Simple_repeat 2 35 0 207 360 93 22 chr10 123722728 123722867 -21866421 + MIR3 SINE MIR 45 193 -15 1294 284 62 50 chr10 123722939 123723439 -21865849 - MLT2B1 LTR ERVL 0 520 15 2070 97 6 59 chr10 123723439 123723759 -21865529 + AluSx SINE Alu 1 303 -9 1461 193 37 30 chr10 123723903 123724199 -21865089 - AluJo SINE Alu -14 298 1 663 206 88 6 chr10 123725098 123725268 -21864020 - MLT1K LTR MaLR -36 552 369 442 283 40 20 chr10 123725353 123725505 -21863783 - MLT1K LTR MaLR -411 177 23 578 174 40 20 chr10 123727130 123727279 -21862009 + MIR SINE MIR 42 193 -69 1380 174 110 50 chr10 123727505 123727787 -21861501 + AluJo SINE Alu 2 300 -2 274 136 153 0 chr10 123727811 123727870 -21861418 - MER116 DNA Mariner 0 80 13 2131 102 7 0 chr10 123729452 123729737 -21859551 - AluY SINE Alu -24 287 1 2054 133 20 0 chr10 123729737 123730031 -21859257 - AluSx SINE Alu -12 300 1 2054 91 51 15 chr10 123730280 123730554 -21858734 + AluSg SINE Alu 1 284 -26 305 254 0 0 chr10 123731131 123731202 -21858086 + MIR SINE MIR 68 138 -124 1883 114 57 4 chr10 123731428 123731692 -21857596 + AluSg SINE Alu 1 278 -32 459 284 10 56 chr10 123731959 123732156 -21857132 - MIR SINE MIR -11 251 64 2021 115 54 10 chr10 123733666 123733961 -21855327 + AluSx SINE Alu 1 308 -4 2210 109 30 3 chr10 123736200 123736503 -21852785 + AluSx SINE Alu 1 311 -1 2392 103 7 0 chr10 123736599 123736909 -21852379 + AluSx SINE Alu 1 312 0 22 43 0 21 chr10 123737228 123737254 -21852034 + AT_rich Low_complexity Low_complexity 1 27 -19 2428 82 0 3 chr10 123737254 123737560 -21851728 + AluSg SINE Alu 1 305 -5 22 43 0 21 chr10 123737560 123737580 -21851708 + AT_rich Low_complexity Low_complexity 27 46 0 282 226 118 39 chr10 123737608 123737710 -21851578 - L1MD2 LINE L1 -228 6131 6022 2245 92 3 0 chr10 123739623 123739907 -21849381 + AluSp SINE Alu 1 285 -28 1685 180 17 7 chr10 123740095 123740384 -21848904 + AluJo SINE Alu 1 292 -20 2524 61 0 3 chr10 123740390 123740687 -21848601 + AluY SINE Alu 1 296 -15 2018 86 100 4 chr10 123740691 123740971 -21848317 + AluSx SINE Alu 6 312 0 350 309 109 0 chr10 123741026 123741201 -21848087 + MIR SINE MIR 15 208 -54 2121 113 0 3 chr10 123741249 123741541 -21847747 - AluSx SINE Alu -7 305 15 455 259 71 46 chr10 123741782 123741979 -21847309 - MIR SINE MIR -8 254 53 203 79 26 0 chr10 123742192 123742230 -21847058 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 192 319 53 9 chr10 123743992 123744105 -21845183 - L2 LINE L2 -5 3308 3191 323 254 81 81 chr10 123745041 123745238 -21844050 - MIR3 SINE MIR -3 205 9 2514 55 0 46 chr10 123746291 123746617 -21842671 + AluY SINE Alu 1 311 0 427 280 48 0 chr10 123748043 123748168 -21841120 + MIR SINE MIR 20 150 -112 1981 125 3 22 chr10 123748202 123748514 -21840774 - AluSx SINE Alu 0 312 7 189 0 0 0 chr10 123749199 123749220 -21840068 + (T)n Simple_repeat Simple_repeat 1 21 0 460 207 67 59 chr10 123750095 123750230 -21839058 + L2 LINE L2 3178 3313 0 1846 169 0 0 chr10 123750341 123750650 -21838638 + AluJb SINE Alu 3 311 0 183 205 0 0 chr10 123751166 123751205 -21838083 + (CA)n Simple_repeat Simple_repeat 1 39 0 816 11 0 0 chr10 123756195 123756288 -21833000 + (TC)n Simple_repeat Simple_repeat 2 94 0 26 0 0 0 chr10 123756808 123756834 -21832454 + AT_rich Low_complexity Low_complexity 1 26 0 309 26 0 0 chr10 123757349 123757387 -21831901 + (TG)n Simple_repeat Simple_repeat 2 39 0 312 94 0 0 chr10 123757472 123757525 -21831763 + (T)n Simple_repeat Simple_repeat 1 53 0 445 144 22 0 chr10 123760535 123760625 -21828663 + (CA)n Simple_repeat Simple_repeat 1 92 0 21 36 0 0 chr10 123765557 123765585 -21823703 + GC_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr10 123765613 123765634 -21823654 + GC_rich Low_complexity Low_complexity 1 21 0 29 60 0 0 chr10 123765714 123765764 -21823524 + GC_rich Low_complexity Low_complexity 1 50 0 236 30 30 0 chr10 123765932 123765965 -21823323 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 202 0 59 29 chr10 123766376 123766410 -21822878 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 189 0 0 0 chr10 123766695 123766716 -21822572 + (T)n Simple_repeat Simple_repeat 1 21 0 219 69 0 0 chr10 123767768 123767797 -21821491 + (TC)n Simple_repeat Simple_repeat 2 30 0 29 0 0 0 chr10 123768314 123768343 -21820945 + AT_rich Low_complexity Low_complexity 1 29 0 2435 70 0 0 chr10 123769581 123769894 -21819394 - AluSq SINE Alu 0 313 1 223 268 56 0 chr10 123774983 123775054 -21814234 + MIR SINE MIR 159 233 -29 336 283 42 17 chr10 123776174 123776294 -21812994 - MIR SINE MIR -16 246 124 24 0 0 0 chr10 123777430 123777454 -21811834 + AT_rich Low_complexity Low_complexity 1 24 0 215 284 0 15 chr10 123778065 123778132 -21811156 + CT-rich Low_complexity Low_complexity 2 67 0 221 178 0 22 chr10 123778641 123778686 -21810602 + A-rich Low_complexity Low_complexity 47 90 0 187 265 0 0 chr10 123780711 123780760 -21808528 - MIR SINE MIR -108 154 106 207 0 0 0 chr10 123780826 123780849 -21808439 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1886 128 49 0 chr10 123780852 123781118 -21808170 - AluSg SINE Alu -31 279 1 495 33 0 0 chr10 123782917 123782978 -21806310 + (TG)n Simple_repeat Simple_repeat 2 62 0 23 0 0 0 chr10 123783943 123783966 -21805322 + AT_rich Low_complexity Low_complexity 1 23 0 1244 195 20 79 chr10 123785368 123785711 -21803577 - MER33 DNA MER1_type -1 323 1 186 103 0 0 chr10 123787778 123787807 -21801481 + (CA)n Simple_repeat Simple_repeat 2 30 0 192 77 0 0 chr10 123787818 123787844 -21801444 + (TCTCCC)n Simple_repeat Simple_repeat 3 28 0 451 222 36 11 chr10 123792405 123792562 -21796726 - MLT1J2 LTR MaLR -189 220 48 582 223 31 0 chr10 123793286 123793416 -21795872 + MER91C DNA MER1_type 2 135 -5 22 0 0 0 chr10 123793809 123793831 -21795457 + AT_rich Low_complexity Low_complexity 1 22 0 2419 94 0 3 chr10 123794932 123795240 -21794048 - AluSc SINE Alu 0 309 3 753 274 63 8 chr10 123795600 123795837 -21793451 + MIR SINE MIR 2 251 -11 2115 135 3 0 chr10 123795934 123796246 -21793042 - AluSq SINE Alu 0 313 1 205 261 0 0 chr10 123797694 123797759 -21791529 + T-rich Low_complexity Low_complexity 1 65 0 224 241 0 0 chr10 123797959 123798013 -21791275 + T-rich Low_complexity Low_complexity 1 54 0 183 184 0 0 chr10 123798218 123798256 -21791032 + T-rich Low_complexity Low_complexity 2 39 0 191 88 29 0 chr10 123798620 123798654 -21790634 + (TTTTTA)n Simple_repeat Simple_repeat 2 36 0 * 224 200 18 0 chr10 123798649 123798704 -21790584 + CT-rich Low_complexity Low_complexity 1 56 0 280 288 0 0 chr10 123799175 123799286 -21790002 + T-rich Low_complexity Low_complexity 1 111 0 198 103 0 0 chr10 123801838 123801867 -21787421 + (A)n Simple_repeat Simple_repeat 1 29 0 180 231 0 0 chr10 123802252 123802304 -21786984 + CT-rich Low_complexity Low_complexity 4 55 0 292 210 40 10 chr10 123803547 123803647 -21785641 + T-rich Low_complexity Low_complexity 4 106 0 252 77 0 0 chr10 123803875 123803914 -21785374 + (CA)n Simple_repeat Simple_repeat 2 40 0 21 0 0 0 chr10 123805064 123805085 -21784203 + AT_rich Low_complexity Low_complexity 1 21 0 203 266 47 0 chr10 123807522 123807586 -21781702 + L2 LINE L2 2653 2719 -595 442 254 77 91 chr10 123807601 123807810 -21781478 - MIR SINE MIR -39 223 18 1301 148 9 23 chr10 123808149 123808366 -21780922 - MER20 DNA MER1_type -4 215 2 260 284 28 18 chr10 123808379 123808488 -21780800 + L2 LINE L2 3203 3312 -1 1405 226 131 47 chr10 123809094 123809559 -21779729 - MLT1D LTR MaLR -1 504 1 341 255 41 55 chr10 123809779 123809950 -21779338 + MIR SINE MIR 13 187 -55 2156 95 0 37 chr10 123810033 123810328 -21778960 - AluSx SINE Alu -3 309 26 295 238 16 0 chr10 123810905 123810968 -21778320 - L2 LINE L2 -1 3312 3249 526 338 60 5 chr10 123811137 123811338 -21777950 - MIR SINE MIR -48 214 3 371 231 266 25 chr10 123811624 123811718 -21777570 - MER112 DNA MER1_type -1 255 185 2087 141 0 3 chr10 123811718 123812022 -21777266 + AluSx SINE Alu 1 303 -9 371 231 266 25 chr10 123812022 123812130 -21777158 - MER112 DNA MER1_type -71 185 4 406 220 73 27 chr10 123812314 123812464 -21776824 - MER103 DNA DNA -7 159 3 268 259 111 19 chr10 123812538 123812646 -21776642 - MIR SINE MIR -51 211 94 244 243 0 122 chr10 123812674 123812781 -21776507 - MLT1F1 LTR MaLR 0 567 474 422 299 60 30 chr10 123812898 123813065 -21776223 - MLT1H LTR MaLR -326 223 52 322 292 0 0 chr10 123813140 123813229 -21776059 - MIR SINE MIR -64 198 110 732 249 12 0 chr10 123813235 123813408 -21775880 - L1M4 LINE L1 -1997 4149 3975 1913 97 0 0 chr10 123813412 123813649 -21775639 - AluSq SINE Alu -76 237 1 435 221 28 18 chr10 123813680 123813843 -21775445 + L1ME LINE L1 5176 5330 -816 422 246 32 33 chr10 123813869 123814035 -21775253 + L1ME LINE L1 5638 5798 -364 295 246 8 82 chr10 123814890 123815012 -21774276 - MIR SINE MIR -77 131 19 314 292 101 59 chr10 123815191 123815410 -21773878 - MIR SINE MIR -22 240 13 245 208 21 0 chr10 123817840 123817888 -21771400 - L2 LINE L2 -257 3056 3008 246 310 139 16 chr10 123818017 123818129 -21771159 - MIR3 SINE MIR -62 146 15 1566 206 29 9 chr10 123818129 123818444 -21770844 - L1MB7 LINE L1 0 6184 5864 246 310 139 16 chr10 123818444 123818460 -21770828 - MIR3 SINE MIR -193 15 2 706 175 28 28 chr10 123818521 123818603 -21770685 - MER106B DNA MER1_type -911 148 64 465 97 0 0 chr10 123818603 123818675 -21770613 + (TA)n Simple_repeat Simple_repeat 2 73 0 706 175 28 28 chr10 123818675 123818735 -21770553 - MER106B DNA MER1_type -994 65 6 406 259 10 27 chr10 123818736 123818905 -21770383 - L1MB7 LINE L1 -310 5864 5700 1958 122 0 11 chr10 123820001 123820279 -21769009 - AluSx SINE Alu 0 312 38 446 294 65 0 chr10 123820341 123820494 -21768794 + MIR SINE MIR 8 170 -92 1423 198 116 45 chr10 123821279 123821582 -21767706 + MER63B DNA MER1_type 4 345 -717 1973 112 59 11 chr10 123821582 123821869 -21767419 - AluSx SINE Alu -11 301 1 1423 198 116 45 chr10 123821869 123821969 -21767319 + MER63B DNA MER1_type 345 436 0 404 289 147 38 chr10 123823773 123823984 -21765304 + MIR SINE MIR 29 262 0 286 360 65 7 chr10 123824058 123824211 -21765077 - MIR SINE MIR -70 192 31 394 271 9 0 chr10 123824569 123824676 -21764612 - L1ME1 LINE L1 -8 6158 6051 1314 156 100 40 chr10 123824678 123824928 -21764360 + AluJb SINE Alu 1 265 -47 281 153 0 17 chr10 123824929 123824988 -21764300 + (CA)n Simple_repeat Simple_repeat 2 59 0 267 281 0 0 chr10 123824988 123825077 -21764211 + L1MC4 LINE L1 6614 6702 -1340 224 233 0 0 chr10 123825079 123825122 -21764166 + (TATG)n Simple_repeat Simple_repeat 2 44 0 2382 216 52 2 chr10 123825166 123825688 -21763600 - L1ME1 LINE L1 -173 5993 5446 356 293 66 38 chr10 123826785 123826891 -21762397 - MER91A DNA MER1_type -1 195 87 182 317 24 0 chr10 123827185 123827267 -21762021 - MIR3 SINE MIR -41 167 84 1337 276 94 96 chr10 123827466 123827684 -21761604 + L2 LINE L2 1995 2212 -1101 1771 171 44 41 chr10 123827684 123828046 -21761242 - MLT1A1 LTR MaLR -2 363 1 1337 276 94 96 chr10 123828046 123828852 -21760436 + L2 LINE L2 2212 3009 -304 2152 103 7 0 chr10 123828852 123829142 -21760146 - AluSg SINE Alu -18 292 1 1337 276 94 96 chr10 123829142 123829447 -21759841 + L2 LINE L2 3009 3313 0 237 296 235 42 chr10 123829588 123829899 -21759389 - L2 LINE L2 -86 3186 2816 285 271 186 17 chr10 123830179 123830297 -21758991 - MIR3 SINE MIR -62 146 9 415 308 122 18 chr10 123831087 123831308 -21757980 - MIR SINE MIR -2 260 17 510 236 79 56 chr10 123831570 123831748 -21757540 + MIR SINE MIR 15 196 -66 1200 207 61 52 chr10 123832342 123832704 -21756584 - MLT1A1 LTR MaLR 0 365 1 433 178 47 84 chr10 123833091 123833198 -21756090 + L2 LINE L2 3169 3271 -1 975 286 48 44 chr10 123833226 123833723 -21755565 - L1ME4a LINE L1 -180 5941 5443 569 292 118 44 chr10 123833752 123834142 -21755146 - L3 LINE CR1 -193 1384 966 21 36 0 0 chr10 123834157 123834185 -21755103 + AT_rich Low_complexity Low_complexity 1 28 0 370 190 113 35 chr10 123834336 123834478 -21754810 - L1ME4a LINE L1 -240 5881 5729 920 204 16 11 chr10 123834478 123834669 -21754619 - AluJo SINE Alu 0 312 121 364 204 61 31 chr10 123834716 123834814 -21754474 - L1ME4a LINE L1 -460 5661 5561 927 297 113 24 chr10 123835209 123835865 -21753423 - HAL1 LINE L1 -741 1766 1053 198 0 0 0 chr10 123835887 123835909 -21753379 + (T)n Simple_repeat Simple_repeat 1 22 0 1526 166 0 50 chr10 123836082 123836360 -21752928 + AluJb SINE Alu 25 288 -24 251 341 18 88 chr10 123836437 123836607 -21752681 + LTR33A LTR ERVL 1 158 -365 399 199 55 48 chr10 123836863 123837009 -21752279 + LTR33A LTR ERVL 377 523 0 838 274 71 29 chr10 123837088 123837508 -21751780 + L1M4 LINE L1 4409 4846 -1300 846 240 9 81 chr10 123837549 123837882 -21751406 - L1M4 LINE L1 -2392 3754 3446 1115 317 47 22 chr10 123837894 123838342 -21750946 + L1M3c LINE L1 898 1356 -5681 2899 193 55 39 chr10 123838349 123839065 -21750223 + L1M3c LINE L1 1722 2454 -4583 2510 69 0 22 chr10 123839065 123839383 -21749905 + AluY SINE Alu 1 311 0 2899 193 55 39 chr10 123839383 123839453 -21749835 + L1M3c LINE L1 2454 2521 -4516 32 0 0 0 chr10 123839483 123839515 -21749773 + AT_rich Low_complexity Low_complexity 1 32 0 21698 150 40 18 chr10 123839557 123841273 -21748015 + L1 LINE L1 16 1693 -5872 365 0 22 0 chr10 123841273 123841318 -21747970 + (CA)n Simple_repeat Simple_repeat 1 46 0 243 0 0 0 chr10 123841317 123841344 -21747944 + (GA)n Simple_repeat Simple_repeat 2 28 0 * 21698 150 40 18 chr10 123841318 123844486 -21744802 + L1 LINE L1 1693 4986 -2579 1411 215 0 0 chr10 123844470 123844763 -21744525 + L1 LINE L1 6523 6815 -750 * 6714 137 30 7 chr10 123844758 123846793 -21742495 + L1MA2 LINE L1 4220 6304 0 6443 243 59 15 chr10 123846790 123849309 -21739979 + L1M1 LINE L1 2678 5306 -2259 * 1243 230 54 12 chr10 123849309 123849717 -21739571 - L1ME LINE L1 -2686 3394 2970 305 140 18 0 chr10 123849717 123849774 -21739514 + CT-rich Low_complexity Low_complexity 4 61 0 366 80 0 0 chr10 123849779 123849829 -21739459 + (TCTCC)n Simple_repeat Simple_repeat 1 50 0 23 68 0 0 chr10 123849832 123849876 -21739412 + GC_rich Low_complexity Low_complexity 1 44 0 223 233 0 17 chr10 123849940 123850000 -21739288 + C-rich Low_complexity Low_complexity 2 60 0 23 0 0 0 chr10 123850011 123850034 -21739254 + GC_rich Low_complexity Low_complexity 1 23 0 600 116 0 0 chr10 123850145 123850240 -21739048 + (TCCCC)n Simple_repeat Simple_repeat 3 97 0 1400 225 46 0 chr10 123850242 123850402 -21738886 - AluJo SINE Alu -17 295 115 185 0 40 0 chr10 123850402 123850427 -21738861 + (TTA)n Simple_repeat Simple_repeat 2 27 0 1400 225 46 0 chr10 123850427 123850546 -21738742 - AluJo SINE Alu -197 115 3 235 204 19 0 chr10 123850553 123850607 -21738681 - L1ME LINE L1 -3104 2976 2922 2009 201 39 53 chr10 123850607 123851074 -21738214 + MLT1D LTR MaLR 1 460 -45 1932 166 97 11 chr10 123851074 123851436 -21737852 + MSTD LTR MaLR 1 393 -3 362 113 0 0 chr10 123851436 123851485 -21737803 + MLT1D LTR MaLR 457 505 0 265 144 89 44 chr10 123851486 123851576 -21737712 - L1ME LINE L1 -3155 2925 2832 984 239 73 83 chr10 123851576 123851973 -21737315 - MER21B LTR ERV1 -62 801 409 1347 233 47 22 chr10 123852000 123852322 -21736966 - MER21B LTR ERV1 -533 330 1 2301 265 75 44 chr10 123852322 123853386 -21735902 - L1ME LINE L1 -3246 2834 1804 2381 172 16 41 chr10 123853386 123853828 -21735460 + MSTB1 LTR MaLR 2 432 0 2301 265 75 44 chr10 123853828 123855447 -21733841 - L1ME LINE L1 -4276 1804 13 411 38 0 0 chr10 123855510 123855563 -21733725 + (CA)n Simple_repeat Simple_repeat 2 54 0 203 170 45 62 chr10 123855563 123855675 -21733613 + (CTTAT)n Simple_repeat Simple_repeat 4 113 0 1829 129 10 42 chr10 123855904 123856214 -21733074 - AluJo SINE Alu -12 300 1 561 289 75 10 chr10 123856301 123856606 -21732682 - HAL1 LINE L1 -860 1647 1323 287 256 13 39 chr10 123858490 123858568 -21730720 - MIR SINE MIR -80 182 107 255 61 0 0 chr10 123859021 123859054 -21730234 + (ATTG)n Simple_repeat Simple_repeat 2 34 0 1831 133 0 0 chr10 123859063 123859327 -21729961 - AluSq SINE Alu -49 264 1 1136 289 66 36 chr10 123859346 123859813 -21729475 + MLT1K LTR MaLR 88 568 -20 499 227 80 40 chr10 123859816 123859992 -21729296 + MER63A DNA MER1_type 27 209 -1 338 195 91 0 chr10 123860556 123860633 -21728655 + MIR SINE MIR 100 183 -79 201 375 45 0 chr10 123862514 123862602 -21726686 - MIR SINE MIR -17 245 154 644 218 8 16 chr10 123863793 123863917 -21725371 - FLAM_A SINE Alu -10 123 1 597 214 119 94 chr10 123863941 123864343 -21724945 - L1ME4a LINE L1 -5 6116 5705 291 341 87 34 chr10 123864621 123864979 -21724309 - L2 LINE L2 -539 2775 2399 260 317 19 29 chr10 123864965 123865069 -21724219 - MIR SINE MIR -75 133 31 * 249 33 0 0 chr10 123865274 123865304 -21723984 + (TAA)n Simple_repeat Simple_repeat 2 31 0 1975 126 0 14 chr10 123866929 123867270 -21722018 + AluSx SINE Alu 1 312 0 2027 108 17 0 chr10 123867814 123868111 -21721177 - AluSx SINE Alu -10 302 1 561 190 5 155 chr10 123869552 123869710 -21719578 + MER5B DNA MER1_type 9 133 -45 2064 128 0 0 chr10 123869710 123870014 -21719274 + AluSx SINE Alu 1 304 -8 561 190 5 155 chr10 123870014 123870055 -21719233 + MER5B DNA MER1_type 132 178 0 439 189 221 16 chr10 123870074 123870201 -21719087 - MER5A DNA MER1_type -28 161 9 1833 157 0 25 chr10 123870449 123870767 -21718521 + AluJb SINE Alu 1 310 -2 244 230 35 58 chr10 123870876 123870963 -21718325 - L2 LINE L2 -1 3271 3187 574 293 84 11 chr10 123871152 123871343 -21717945 - MIR SINE MIR -6 256 52 222 62 0 0 chr10 123871471 123871503 -21717785 + (T)n Simple_repeat Simple_repeat 1 32 0 299 288 84 46 chr10 123871772 123871943 -21717345 - MIR SINE MIR -36 172 2 693 259 75 32 chr10 123872111 123872422 -21716866 + LTR16C LTR ERVL 145 489 -2 1739 151 3 47 chr10 123872514 123872832 -21716456 - AluJb SINE Alu -8 304 1 180 345 0 0 chr10 123873247 123873305 -21715983 + MIR SINE MIR 16 73 -135 1290 139 54 211 chr10 123873594 123873758 -21715530 + THE1C LTR MaLR 1 116 -259 400 54 18 0 chr10 123873758 123873814 -21715474 - AluSp/q SINE Alu -17 296 240 1290 139 54 211 chr10 123873814 123874039 -21715249 + THE1C LTR MaLR 116 375 0 199 204 20 41 chr10 123874043 123874092 -21715196 - L2 LINE L2 -39 3233 3186 405 318 105 28 chr10 123874210 123874534 -21714754 - L2 LINE L2 -188 3084 2726 241 241 121 0 chr10 123874745 123874828 -21714460 + MIR3 SINE MIR 77 169 -39 1985 130 10 0 chr10 123874886 123875186 -21714102 + AluSx SINE Alu 1 303 -9 300 300 36 36 chr10 123875360 123875500 -21713788 + MIR3 SINE MIR 58 197 -11 1656 227 73 63 chr10 123876666 123876696 -21712592 - L1MC5 LINE L1 -48 7913 7885 3023 175 28 32 chr10 123876696 123876751 -21712537 + L1MB8 LINE L1 5532 5586 -592 2168 87 0 0 chr10 123876751 123877037 -21712251 - AluY SINE Alu -5 306 21 3023 175 28 32 chr10 123877037 123877631 -21711657 + L1MB8 LINE L1 5586 6178 0 1656 227 73 63 chr10 123877631 123877905 -21711383 - L1MC5 LINE L1 -76 7885 7615 1900 132 0 0 chr10 123877905 123878210 -21711078 - AluSx SINE Alu 0 305 1 1656 227 73 63 chr10 123878210 123878507 -21710781 - L1MC5 LINE L1 -346 7615 7304 434 282 57 24 chr10 123878941 123879065 -21710223 - L2 LINE L2 -1 3271 3144 617 238 20 7 chr10 123879309 123879456 -21709832 + MIR SINE MIR 66 214 -48 183 161 0 0 chr10 123879494 123879525 -21709763 + L2 LINE L2 3281 3311 -2 890 185 35 75 chr10 123879692 123879919 -21709369 + MER20 DNA MER1_type 2 219 0 562 227 200 7 chr10 123879937 123880087 -21709201 + MER5A DNA MER1_type 11 189 0 768 188 5 83 chr10 123880096 123880288 -21709000 + MER5B DNA MER1_type 2 178 0 349 308 41 77 chr10 123881414 123881583 -21707705 + LTR67 LTR ERVL 16 178 -379 248 235 155 115 chr10 123881909 123882109 -21707179 - L2 LINE L2 -536 2778 2571 195 42 0 0 chr10 123884709 123884733 -21704555 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 348 283 0 40 chr10 123885527 123885626 -21703662 + MIR3 SINE MIR 90 184 -24 267 362 67 9 chr10 123886233 123886338 -21702950 + MIR3 SINE MIR 45 155 -53 460 375 35 0 chr10 123887234 123887434 -21701854 - MIR SINE MIR -10 252 46 193 150 75 0 chr10 123887563 123887603 -21701685 + MIR SINE MIR 141 183 -79 670 300 57 18 chr10 123887677 123887904 -21701384 - MIR SINE MIR -25 237 2 608 267 118 64 chr10 123887915 123888323 -21700965 - L2 LINE L2 -1 3312 2883 531 218 102 20 chr10 123888332 123888479 -21700809 - MER45A DNA AcHobo -17 161 3 214 332 72 16 chr10 123888480 123888673 -21700615 - L2 LINE L2 -464 2850 2647 411 21 0 0 chr10 123889078 123889126 -21700162 + (TA)n Simple_repeat Simple_repeat 2 49 0 1091 144 11 0 chr10 123889638 123889825 -21699463 + AluSg/x SINE Alu 122 310 -2 2560 46 0 0 chr10 123889875 123890182 -21699106 + AluY SINE Alu 1 307 -4 1845 98 7 25 chr10 123890845 123891119 -21698169 + AluSx SINE Alu 36 304 -8 2156 114 0 0 chr10 123892024 123892322 -21696966 + AluSx SINE Alu 1 298 -14 824 298 107 14 chr10 123943167 123943533 -21645755 + MLT1J LTR MaLR 4 403 -108 1601 180 114 17 chr10 123943533 123943551 -21645737 - MER57A LTR ERV1 0 403 388 1649 200 3 0 chr10 123943551 123943861 -21645427 + AluJb SINE Alu 1 311 -1 1601 180 114 17 chr10 123943861 123944203 -21645085 - MER57A LTR ERV1 -15 388 8 224 204 82 0 chr10 123944454 123944503 -21644785 + L2 LINE L2 3215 3267 -5 328 287 107 88 chr10 123944525 123944853 -21644435 + L2 LINE L2 2904 3237 -35 672 219 53 35 chr10 123945628 123945716 -21643572 + MER45A DNA AcHobo 6 91 -1490 1968 130 37 0 chr10 123945716 123946016 -21643272 - AluSx SINE Alu -1 311 1 672 219 53 35 chr10 123946016 123946096 -21643192 + MER45A DNA AcHobo 91 177 -1 489 291 95 22 chr10 123946225 123946404 -21642884 + MIR SINE MIR 28 219 -43 774 134 10 58 chr10 123947512 123948023 -21641265 + L1MB1 LINE L1 5093 5627 -541 2133 88 17 0 chr10 123948023 123948318 -21640970 + AluY SINE Alu 1 300 -11 774 134 10 58 chr10 123948318 123948667 -21640621 + L1MB1 LINE L1 5627 6165 -3 199 269 19 0 chr10 123948863 123948915 -21640373 - MIR SINE MIR -64 144 92 2150 96 0 0 chr10 123950107 123950400 -21638888 + AluY SINE Alu 1 293 -18 443 299 44 7 chr10 123950431 123950568 -21638720 - MIR SINE MIR -72 190 49 383 318 131 17 chr10 123950605 123950781 -21638507 - MIR SINE MIR -44 218 23 404 272 20 54 chr10 123950955 123951102 -21638186 - MIR SINE MIR -80 182 41 1216 305 48 10 chr10 123951481 123951897 -21637391 - LTR16A LTR ERVL -12 438 7 26 50 0 0 chr10 123953421 123953461 -21635827 + AT_rich Low_complexity Low_complexity 1 40 0 2055 144 29 27 chr10 123954467 123954841 -21634447 + THE1C LTR MaLR 1 375 0 322 317 172 7 chr10 123954923 123955068 -21634220 - MIR SINE MIR -92 170 2 351 0 0 0 chr10 123955297 123955336 -21633952 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1892 118 0 21 chr10 123955339 123955619 -21633669 - AluSx SINE Alu -32 280 7 1017 255 5 5 chr10 123955661 123955877 -21633411 - MER58A DNA MER1_type -7 217 2 681 276 102 38 chr10 123955948 123956419 -21632869 + L1ME4a LINE L1 5619 6119 -2 242 368 53 26 chr10 123956606 123956720 -21632568 - L2 LINE L2 -33 3239 3123 266 260 104 0 chr10 123956817 123956913 -21632375 - MIR SINE MIR -62 200 95 293 153 208 0 chr10 123957093 123957165 -21632123 - MER103 DNA DNA -72 94 8 233 347 35 20 chr10 123957999 123958137 -21631151 + MIR SINE MIR 25 163 -45 207 0 0 0 chr10 123958185 123958208 -21631080 + (ATG)n Simple_repeat Simple_repeat 3 25 0 201 349 36 0 chr10 123958462 123958545 -21630743 - MER5A DNA MER1_type 0 189 104 2177 111 0 0 chr10 123958548 123958854 -21630434 - AluSx SINE Alu -6 306 1 259 270 0 16 chr10 123959112 123959175 -21630113 - MIR SINE MIR -115 147 86 516 252 26 0 chr10 123959290 123959405 -21629883 + MER5A DNA MER1_type 72 189 0 347 275 34 9 chr10 123959608 123959753 -21629535 + MIR SINE MIR 37 184 -24 246 106 0 85 chr10 123959994 123960020 -21629268 + L1MB4 LINE L1 5441 5463 -703 3671 184 15 8 chr10 123960020 123960744 -21628544 + L1MB4 LINE L1 5446 6174 -6 246 106 0 85 chr10 123960744 123960764 -21628524 + L1MB4 LINE L1 5463 5483 -683 2254 119 0 0 chr10 123962141 123962444 -21626844 - AluSx SINE Alu -9 303 1 527 333 25 8 chr10 123962602 123962839 -21626449 + MIR SINE MIR 11 251 -11 2634 90 28 3 chr10 123963693 123964048 -21625240 - THE1B LTR MaLR 0 364 1 770 238 54 60 chr10 123964341 123964550 -21624738 - L1MC4 LINE L1 -3 8039 7831 2262 96 7 0 chr10 123964550 123964843 -21624445 - AluY SINE Alu -16 295 1 770 238 54 60 chr10 123964843 123964969 -21624319 - L1MC4 LINE L1 -211 7831 7706 2268 154 56 22 chr10 123964970 123965379 -21623909 - MSTB1 LTR MaLR 0 432 10 769 215 48 85 chr10 123965396 123965696 -21623592 - L1MC4 LINE L1 -195 7674 7332 556 160 337 12 chr10 123965909 123966078 -21623210 - MER58A DNA MER1_type 0 224 1 713 253 182 35 chr10 123966173 123966671 -21622617 - L2 LINE L2 0 3313 2731 229 276 53 0 chr10 123966760 123966836 -21622452 + MIR SINE MIR 111 190 -72 279 274 83 0 chr10 123967474 123967558 -21621730 - MIR SINE MIR -57 151 61 325 229 171 0 chr10 123968559 123968664 -21620624 - MER91B DNA MER1_type -66 124 2 569 177 32 57 chr10 123968738 123968896 -21620392 + L3 LINE CR1 1335 1488 -89 310 256 64 56 chr10 123969895 123970020 -21619268 + MIR SINE MIR 124 249 -13 1570 209 21 106 chr10 123970766 123971349 -21617939 - MLT1H LTR MaLR 0 549 17 2560 92 8 8 chr10 123971988 123972345 -21616943 - L1PA10 LINE L1 0 6168 5812 825 59 0 0 chr10 123972345 123972446 -21616842 + L1P4 LINE L1 5666 5766 -402 726 284 31 5 chr10 123972754 123972976 -21616312 - MIR SINE MIR -32 230 3 1695 101 4 21 chr10 123973020 123973257 -21616031 + AluSc SINE Alu 1 233 -76 365 29 29 43 chr10 123973257 123973326 -21615962 + (TAAAAA)n Simple_repeat Simple_repeat 6 73 0 633 188 281 10 chr10 123974349 123974541 -21614747 - MLT1D LTR MaLR -72 433 190 282 105 0 123 chr10 123974540 123974597 -21614691 - MLT1D LTR MaLR -573 53 4 * 426 254 25 16 chr10 123975433 123975555 -21613733 + L2 LINE L2 3187 3309 -4 712 281 104 43 chr10 123975753 123976113 -21613175 + L1ME4a LINE L1 5388 5787 -334 2277 108 20 0 chr10 123976113 123976410 -21612878 - AluSx SINE Alu -9 303 1 712 281 104 43 chr10 123976410 123976537 -21612751 + L1ME4a LINE L1 5787 5905 -216 4423 89 6 32 chr10 123976576 123977202 -21612086 + MER4B LTR ERV1 1 610 0 244 322 152 6 chr10 123977227 123977398 -21611890 - MIR SINE MIR 0 262 67 1434 261 55 22 chr10 123978627 123979117 -21610171 - L1M4 LINE L1 -1100 5046 4541 234 243 71 0 chr10 123979112 123979182 -21610106 + L1M4 LINE L1 5057 5131 -1015 * 2251 125 0 3 chr10 123979259 123979572 -21609716 + AluSx SINE Alu 1 312 0 712 211 35 60 chr10 123979875 123980074 -21609214 - MER20 DNA MER1_type -20 199 6 498 202 11 28 chr10 123980715 123980893 -21608395 + (CATA)n Simple_repeat Simple_repeat 4 178 0 266 267 11 28 chr10 123980884 123981064 -21608224 + (CA)n Simple_repeat Simple_repeat 2 178 0 * 433 228 132 0 chr10 123981546 123981682 -21607606 + MIR SINE MIR 76 229 -33 337 205 24 0 chr10 123981855 123981938 -21607350 + MIR SINE MIR 112 196 -66 1168 128 128 18 chr10 123982889 123983107 -21606181 - L1MA4A LINE L1 -5 6298 6057 745 186 0 0 chr10 123983132 123983250 -21606038 - FLAM_C SINE Alu -25 118 1 285 181 0 28 chr10 123983250 123983322 -21605966 - L1MA4A LINE L1 -231 6072 6003 32 75 0 0 chr10 123983494 123983561 -21605727 + AT_rich Low_complexity Low_complexity 1 67 0 618 285 37 59 chr10 123985341 123985664 -21603624 + L2 LINE L2 2997 3312 -1 449 298 87 12 chr10 123985685 123985846 -21603442 - MER102b DNA MER1_type -16 325 153 257 319 42 8 chr10 123986868 123986987 -21602301 - LTR16C LTR ERVL -1 490 368 337 356 0 12 chr10 123987590 123987753 -21601535 - L3 LINE CR1 -722 855 695 896 249 77 75 chr10 123987904 123988373 -21600915 - LTR16C LTR ERVL 0 491 22 2288 179 50 90 chr10 123988982 123989559 -21599729 - MLT2B3 LTR ERVL 0 554 1 953 194 66 20 chr10 123989605 123989801 -21599487 - MER58C DNA MER1_type -1 214 10 2404 77 0 19 chr10 123990046 123990358 -21598930 + AluY SINE Alu 1 306 -5 499 151 20 110 chr10 123990419 123990467 -21598821 - LTR41 LTR ERVL -7 766 715 1484 188 71 9 chr10 123990467 123990791 -21598497 + MER2 DNA MER2_type 1 344 0 499 151 20 110 chr10 123990791 123990888 -21598400 - LTR41 LTR ERVL -58 715 634 1413 117 39 0 chr10 123990904 123991109 -21598179 - MLT1B LTR MaLR 0 390 178 * 1674 121 19 60 chr10 123991087 123991402 -21597886 + MER51A LTR ERV1 333 634 0 835 235 5 10 chr10 123991521 123991717 -21597571 - LTR41 LTR ERVL -578 195 1 2104 82 36 16 chr10 123992368 123992671 -21596617 - MER11A LTR ERVK 0 1266 958 17157 43 1 0 chr10 123992671 123994729 -21594559 + L1P LINE L1 594 2653 -3493 3103 94 31 7 chr10 123994841 123995288 -21594000 - L1MA2 LINE L1 -271 6033 5576 2212 172 72 41 chr10 123995321 123995810 -21593478 - MLT1D LTR MaLR 0 505 2 421 268 101 15 chr10 123996123 123996348 -21592940 - MIR SINE MIR -7 255 14 337 283 144 40 chr10 123996417 123996590 -21592698 - MIR3 SINE MIR -6 202 12 313 272 44 44 chr10 123997214 123997372 -21591916 + L2 LINE L2 2598 2755 -559 894 253 21 0 chr10 123999657 123999898 -21589390 - MIR SINE MIR -7 255 10 1352 249 71 14 chr10 124000314 124000752 -21588536 - LTR16B LTR ERVL -1 463 1 266 326 11 0 chr10 124000801 124000896 -21588392 + MIR SINE MIR 134 229 -33 201 111 56 0 chr10 124001034 124001070 -21588218 + C-rich Low_complexity Low_complexity 1 38 0 253 262 112 19 chr10 124003121 124003228 -21586060 + MIR SINE MIR 29 145 -63 1068 245 159 34 chr10 124003262 124003683 -21585605 + MLT1H LTR MaLR 29 536 -13 1794 219 21 62 chr10 124004487 124005048 -21584240 + L1MC5 LINE L1 6989 7526 -435 223 277 24 0 chr10 124005413 124005496 -21583792 - L2 LINE L2 -274 2998 2914 1647 217 55 55 chr10 124005607 124006096 -21583192 - MLT1D LTR MaLR -16 489 1 311 328 56 20 chr10 124006099 124006297 -21582991 - L2 LINE L2 -12 3301 3097 774 252 45 25 chr10 124007487 124007729 -21581559 + MIR SINE MIR 12 258 -4 1837 167 7 10 chr10 124007730 124008029 -21581259 + AluJb SINE Alu 1 298 -14 1366 158 201 4 chr10 124008146 124008424 -21580864 + MSTD LTR MaLR 64 396 0 433 261 106 82 chr10 124008522 124008852 -21580436 + L2 LINE L2 2387 2724 -590 974 135 0 0 chr10 124008852 124008985 -21580303 + AluSp SINE Alu 1 133 -180 351 261 0 0 chr10 124008999 124009087 -21580201 + L1MC4 LINE L1 6614 6701 -1341 1367 90 0 11 chr10 124009087 124009264 -21580024 + AluSp SINE Alu 125 299 -14 347 297 149 39 chr10 124009264 124009564 -21579724 + L2 LINE L2 2712 3040 -273 258 278 11 33 chr10 124009564 124009654 -21579634 + L2 LINE L2 3226 3313 0 441 207 12 0 chr10 124010854 124010936 -21578352 - MER81 DNA DNA -1 113 31 34 0 0 0 chr10 124011720 124011754 -21577534 + AT_rich Low_complexity Low_complexity 1 34 0 1811 153 0 42 chr10 124013804 124014111 -21575177 - AluJb SINE Alu -18 294 1 350 262 71 34 chr10 124014270 124014605 -21574683 - MLT1I LTR MaLR -28 422 66 1388 231 87 23 chr10 124014947 124015295 -21573993 + MLT2D LTR ERVL 1 378 -36 180 0 0 0 chr10 124015295 124015315 -21573973 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 1388 231 87 23 chr10 124015315 124015355 -21573933 + MLT2D LTR ERVL 378 414 0 236 248 56 56 chr10 124016085 124016210 -21573078 - L2 LINE L2 -218 3054 2930 328 250 157 0 chr10 124017023 124017131 -21572157 + MIR3 SINE MIR 47 171 -37 831 234 51 26 chr10 124018850 124019115 -21570173 + MLT1G3 LTR MaLR 7 309 -281 704 311 22 4 chr10 124019113 124019338 -21569950 - LTR16B LTR ERVL -168 296 68 * 1237 71 0 6 chr10 124020696 124020864 -21568424 - L1PA13 LINE L1 0 6163 5997 362 277 101 20 chr10 124020894 124021042 -21568246 - MIR SINE MIR -97 165 6 347 220 19 31 chr10 124021110 124021269 -21568019 + (CA)n Simple_repeat Simple_repeat 1 157 0 2285 125 33 25 chr10 124021997 124022358 -21566930 + THE1B LTR MaLR 1 364 0 430 256 97 17 chr10 124022823 124022999 -21566289 - MIR SINE MIR -61 201 12 2488 86 0 0 chr10 124023536 124023839 -21565449 - AluSg SINE Alu -7 303 1 1390 295 97 22 chr10 124024874 124025413 -21563875 - MLT1E LTR MaLR 0 593 15 832 200 61 18 chr10 124025415 124025794 -21563494 + L1ME2 LINE L1 5727 6157 -7 243 236 0 0 chr10 124026083 124026138 -21563150 + MER117 DNA MER1_type 114 168 -29 180 283 0 0 chr10 124026245 124026291 -21562997 - L2 LINE L2 -5 3267 3222 247 287 46 0 chr10 124026676 124026763 -21562525 - MIR SINE MIR -118 144 54 21 0 0 0 chr10 124026809 124026830 -21562458 + AT_rich Low_complexity Low_complexity 1 21 0 351 218 82 18 chr10 124026917 124027027 -21562261 + MIR3 SINE MIR 82 198 -10 269 283 40 73 chr10 124027989 124028166 -21561122 - MIR3 SINE MIR -5 203 33 222 283 0 0 chr10 124028469 124028522 -21560766 + GA-rich Low_complexity Low_complexity 1 53 0 384 326 15 0 chr10 124028845 124028977 -21560311 - L2 LINE L2 0 3313 3180 186 270 217 16 chr10 124029094 124029283 -21560005 - L2 LINE L2 -351 2963 2737 1109 250 117 10 chr10 124029858 124030242 -21559046 + LTR33 LTR ERVL 15 439 -82 2174 185 47 7 chr10 124030399 124030843 -21558445 + L1MB5 LINE L1 5705 6166 -8 1142 147 0 33 chr10 124031561 124031745 -21557543 - AluJb SINE Alu -1 311 134 357 299 0 9 chr10 124031846 124031953 -21557335 + MER103 DNA DNA 12 117 -49 360 207 11 11 chr10 124032002 124032089 -21557199 + MER53 DNA DNA 99 185 -4 589 264 48 0 chr10 124032267 124032434 -21556854 + MIR SINE MIR 57 231 -31 457 202 36 0 chr10 124032958 124033042 -21556246 + FRAM SINE Alu 28 114 -62 1044 196 66 123 chr10 124033053 124033491 -21555797 - MLT1C LTR MaLR -49 418 6 699 289 60 16 chr10 124033510 124033759 -21555529 - MIR SINE MIR 0 262 3 401 276 0 0 chr10 124033913 124034018 -21555270 - MIR SINE MIR -97 165 61 915 236 11 0 chr10 124034146 124034328 -21554960 + MER63A DNA MER1_type 27 210 0 295 256 90 0 chr10 124034698 124034817 -21554471 - MIR SINE MIR -61 147 40 2107 221 119 55 chr10 124035199 124035391 -21553897 - L1MD2 LINE L1 -14 6345 6167 183 80 0 0 chr10 124035391 124035416 -21553872 + (TG)n Simple_repeat Simple_repeat 2 26 0 2107 221 119 55 chr10 124035416 124035666 -21553622 - L1MD2 LINE L1 -192 6167 5935 1800 189 141 7 chr10 124035666 124036078 -21553210 + MLT1C LTR MaLR 1 467 0 2107 221 119 55 chr10 124036078 124036363 -21552925 - L1MD2 LINE L1 -424 5935 5570 2937 87 67 37 chr10 124036937 124037429 -21551859 + L1MA2 LINE L1 5798 6304 0 491 273 83 19 chr10 124037508 124037724 -21551564 - L1MC5 LINE L1 -417 7544 7315 225 0 0 0 chr10 124038539 124038564 -21550724 + (TG)n Simple_repeat Simple_repeat 2 26 0 309 89 0 0 chr10 124038787 124038832 -21550456 + (TC)n Simple_repeat Simple_repeat 1 45 0 254 295 13 0 chr10 124040073 124040151 -21549137 + MIR SINE MIR 74 152 -110 552 238 65 0 chr10 124040556 124040714 -21548574 - MIR SINE MIR -50 212 46 1501 256 6 0 chr10 124040719 124041039 -21548249 - MER58B DNA MER1_type -19 322 1 258 188 333 0 chr10 124041082 124041178 -21548110 - MIR SINE MIR -108 154 27 244 271 86 76 chr10 124041407 124041873 -21547415 - L2 LINE L2 -1 3271 2773 2145 89 0 0 chr10 124042080 124042349 -21546939 + AluY SINE Alu 41 309 -2 343 312 65 21 chr10 124042705 124042922 -21546366 + MIR3 SINE MIR 14 231 -31 21 36 0 0 chr10 124043991 124044019 -21545269 + AT_rich Low_complexity Low_complexity 1 28 0 2318 45 52 7 chr10 124044455 124044744 -21544544 + AluY SINE Alu 1 302 -9 1428 167 72 18 chr10 124045625 124045901 -21543387 + AluJo SINE Alu 1 291 -21 650 165 97 57 chr10 124045955 124046131 -21543157 + MLT1C LTR MaLR 2 184 -283 329 113 19 0 chr10 124046135 124046188 -21543100 + U7 snRNA snRNA 3 56 -7 1919 134 13 22 chr10 124046195 124046508 -21542780 + MLT1C LTR MaLR 158 467 0 327 92 46 0 chr10 124046813 124046878 -21542410 + (TG)n Simple_repeat Simple_repeat 1 68 0 218 191 44 59 chr10 124047092 124047160 -21542128 - MIR SINE MIR -72 190 124 422 224 56 8 chr10 124048147 124048272 -21541016 + MIR SINE MIR 117 247 -15 330 239 73 9 chr10 124048917 124049026 -21540262 + LTR67 LTR ERVL 438 553 -4 268 336 24 16 chr10 124049070 124049195 -21540093 - MIR SINE MIR -66 142 17 286 302 62 16 chr10 124051801 124051930 -21537358 + L2 LINE L2 2986 3120 -193 415 290 65 12 chr10 124052035 124052204 -21537084 + L2 LINE L2 3136 3313 0 511 170 41 61 chr10 124052281 124052428 -21536860 - MLT1H LTR MaLR -7 560 417 582 215 107 39 chr10 124052485 124052683 -21536605 - MLT1H LTR MaLR -261 288 38 267 114 0 0 chr10 124052741 124052776 -21536512 - U2 snRNA snRNA -153 35 1 351 338 7 14 chr10 124052790 124052929 -21536359 - MIR SINE MIR -105 157 20 358 285 95 13 chr10 124053076 124053234 -21536054 + MIR SINE MIR 59 229 -33 378 242 216 42 chr10 124053620 124053810 -21535478 - MLT1K LTR MaLR -3 585 363 472 265 0 0 chr10 124055955 124056057 -21533231 + MIR SINE MIR 48 149 -113 26 64 0 0 chr10 124056107 124056154 -21533134 + AT_rich Low_complexity Low_complexity 1 47 0 823 285 92 34 chr10 124056159 124056660 -21532628 + MLT1H LTR MaLR 17 546 -3 197 33 33 0 chr10 124057480 124057510 -21531778 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 253 294 43 0 chr10 124057520 124057612 -21531676 - L2 LINE L2 -36 3277 3182 1957 265 41 32 chr10 124058330 124058918 -21530370 - MLT1E LTR MaLR 0 593 1 215 269 19 0 chr10 124058989 124059041 -21530247 - L3 LINE CR1 -15 1562 1510 498 255 100 39 chr10 124059274 124059505 -21529783 - L1M4 LINE L1 -1821 4325 4081 2126 162 8 22 chr10 124059615 124059979 -21529309 - MLT1A1 LTR MaLR -2 363 5 240 111 0 0 chr10 124060453 124060489 -21528799 + (TG)n Simple_repeat Simple_repeat 1 36 0 590 250 62 0 chr10 124060801 124060945 -21528343 - MIR SINE MIR -2 260 108 21 0 0 0 chr10 124063088 124063109 -21526179 + AT_rich Low_complexity Low_complexity 1 21 0 248 236 0 18 chr10 124064556 124064611 -21524677 + (TG)n Simple_repeat Simple_repeat 1 54 0 236 214 36 60 chr10 124064933 124065017 -21524271 + LTR67 LTR ERVL 461 542 -15 1302 246 159 11 chr10 124065365 124065743 -21523545 + LTR16C LTR ERVL 1 434 -57 537 335 45 18 chr10 124066491 124066712 -21522576 - MIR SINE MIR -8 254 28 772 160 0 30 chr10 124066722 124066853 -21522435 + FLAM_C SINE Alu 1 127 -6 343 191 23 13 chr10 124066887 124066973 -21522315 - MIR3 SINE MIR -41 167 103 248 242 16 0 chr10 124067570 124067632 -21521656 - MLT1K LTR MaLR -8 580 518 1603 281 52 8 chr10 124068049 124068529 -21520759 + MLT1J LTR MaLR 1 501 -10 659 220 23 79 chr10 124070030 124070244 -21519044 + MIR SINE MIR 32 233 -29 308 311 77 79 chr10 124070321 124070762 -21518526 - L2 LINE L2 -4 3268 2829 22 0 0 0 chr10 124071265 124071287 -21518001 + AT_rich Low_complexity Low_complexity 1 22 0 1159 193 14 9 chr10 124072065 124072283 -21517005 + MER20 DNA MER1_type 1 219 0 210 118 0 0 chr10 124072507 124072541 -21516747 + (TGAA)n Simple_repeat Simple_repeat 4 37 0 608 293 125 0 chr10 124072727 124072935 -21516353 + MIR SINE MIR 13 246 -16 548 258 136 20 chr10 124073543 124073741 -21515547 - MIR SINE MIR -28 234 14 258 136 0 0 chr10 124076071 124076115 -21513173 + (GGAA)n Simple_repeat Simple_repeat 2 45 0 264 59 0 0 chr10 124076619 124076653 -21512635 + (A)n Simple_repeat Simple_repeat 1 34 0 195 42 0 0 chr10 124076879 124076903 -21512385 + (CCCCCA)n Simple_repeat Simple_repeat 2 25 0 200 176 0 0 chr10 124078260 124078294 -21510994 + CT-rich Low_complexity Low_complexity 1 34 0 182 244 0 0 chr10 124078606 124078647 -21510641 + L3b LINE CR1 1539 1579 -4 239 361 46 0 chr10 124079334 124079442 -21509846 + L2 LINE L2 2745 2857 -457 369 0 0 0 chr10 124080532 124080573 -21508715 + (CA)n Simple_repeat Simple_repeat 2 42 0 685 301 0 38 chr10 124080676 124080885 -21508403 - MIR SINE MIR -48 214 14 204 326 78 31 chr10 124080945 124081074 -21508214 + MIR SINE MIR 60 194 -68 1466 124 8 33 chr10 124081123 124081388 -21507900 + AluSg/x SINE Alu 67 310 0 2302 65 0 10 chr10 124081520 124081812 -21507476 - AluY SINE Alu -7 304 16 351 281 25 25 chr10 124083001 124083122 -21506166 - MIR SINE MIR -48 214 94 537 324 47 19 chr10 124084086 124084299 -21504989 - MIR SINE MIR -31 231 13 802 175 11 6 chr10 124084575 124084752 -21504536 - MER53 DNA DNA -2 187 10 180 0 0 0 chr10 124084848 124084868 -21504420 + (TAA)n Simple_repeat Simple_repeat 3 22 0 503 179 60 0 chr10 124085015 124085099 -21504189 - MER5B DNA MER1_type -1 177 89 2136 126 0 0 chr10 124085433 124085734 -21503554 + AluSq SINE Alu 1 301 -12 914 178 56 22 chr10 124087295 124087475 -21501813 - MER5A DNA MER1_type -1 188 3 373 285 133 20 chr10 124087636 124087733 -21501555 + MER5A DNA MER1_type 16 137 -52 2440 103 27 43 chr10 124087733 124088103 -21501185 + THE1B LTR MaLR 1 364 0 373 285 133 20 chr10 124088103 124088156 -21501132 + MER5A DNA MER1_type 137 183 -6 230 323 0 0 chr10 124088210 124088275 -21501013 - MIR3 SINE MIR -51 157 93 338 322 38 38 chr10 124089647 124089830 -21499458 - L2 LINE L2 -5 3308 3126 222 329 35 0 chr10 124092410 124092495 -21496793 + MIR SINE MIR 119 206 -56 667 280 66 29 chr10 124092793 124092962 -21496326 - MIR SINE MIR -3 259 77 1877 195 72 16 chr10 124092962 124093404 -21495884 - MLT1C LTR MaLR 0 467 1 667 280 66 29 chr10 124093404 124093477 -21495811 - MIR SINE MIR -185 77 8 243 338 81 74 chr10 124094152 124094509 -21494779 + L2 LINE L2 2877 3239 -33 1637 164 72 23 chr10 124094509 124094857 -21494431 - MLT1A1 LTR MaLR 0 365 1 243 338 81 74 chr10 124094857 124094892 -21494396 + L2 LINE L2 3239 3272 0 711 247 34 60 chr10 124095039 124095274 -21494014 + MIR SINE MIR 34 262 0 464 256 70 45 chr10 124095859 124096015 -21493273 + MIR3 SINE MIR 45 204 -4 350 299 58 26 chr10 124096076 124096230 -21493058 + MIR SINE MIR 37 195 -67 180 0 0 0 chr10 124096493 124096513 -21492775 + (ATG)n Simple_repeat Simple_repeat 1 20 0 356 246 145 37 chr10 124096513 124096728 -21492560 - MIR SINE MIR -5 257 16 2173 84 3 0 chr10 124097195 124097481 -21491807 - AluSq SINE Alu -13 300 14 2473 74 0 0 chr10 124097735 124098044 -21491244 - AluSc SINE Alu 0 309 1 562 286 63 5 chr10 124098188 124098394 -21490894 + MIR SINE MIR 45 262 0 354 251 141 80 chr10 124098552 124098751 -21490537 - MIR SINE MIR -4 258 48 1839 233 22 15 chr10 124099073 124099532 -21489756 + MLT1C LTR MaLR 6 467 0 223 298 53 0 chr10 124099559 124099616 -21489672 - MIR3 SINE MIR -36 172 113 210 296 82 41 chr10 124102678 124102776 -21486512 + L3 LINE CR1 1410 1511 -66 203 279 115 0 chr10 124102863 124102924 -21486364 - L2 LINE L2 0 3313 3246 438 294 157 41 chr10 124102966 124103329 -21485959 - L2 LINE L2 -192 3121 2710 720 152 0 32 chr10 124104105 124104230 -21485058 - L1M2 LINE L1 -542 5749 5629 1939 155 39 50 chr10 124104230 124104246 -21485042 + L1MA7 LINE L1 5838 5853 -438 2483 90 59 8 chr10 124104246 124104603 -21484685 - THE1C LTR MaLR 0 375 1 1939 155 39 50 chr10 124104603 124105044 -21484244 + L1MA7 LINE L1 5853 6291 0 7505 44 1 1 chr10 124105347 124106973 -21482315 - L1PA5 LINE L1 0 6154 4532 225 222 0 0 chr10 124108434 124108479 -21480809 + L1M3 LINE L1 5831 5875 -305 21 0 0 0 chr10 124108491 124108512 -21480776 + AT_rich Low_complexity Low_complexity 1 21 0 457 289 26 40 chr10 124109035 124109151 -21480137 + MIR SINE MIR 112 227 -35 2011 107 0 0 chr10 124109151 124109421 -21479867 - AluSx SINE Alu -12 300 31 457 289 26 40 chr10 124109421 124109456 -21479832 + MIR SINE MIR 227 261 -1 204 200 0 0 chr10 124109477 124109522 -21479766 + (TAA)n Simple_repeat Simple_repeat 1 45 0 2227 86 3 3 chr10 124109847 124110150 -21479138 + AluSc SINE Alu 1 303 -6 428 250 108 2 chr10 124110222 124110399 -21478889 - MIR SINE MIR -41 221 30 598 324 40 27 chr10 124110426 124110652 -21478636 - MIR SINE MIR 0 262 36 484 221 25 63 chr10 124111797 124111955 -21477333 + MER103 DNA DNA 8 159 -7 359 281 32 65 chr10 124112986 124113232 -21476056 - L1MEc LINE L1 -3997 2399 2162 388 220 11 0 chr10 124114759 124114850 -21474438 + MIR SINE MIR 157 248 -14 309 250 152 0 chr10 124115025 124115117 -21474171 - L2 LINE L2 -1 3271 3166 582 318 81 37 chr10 124115516 124115950 -21473338 + MLT1L LTR MaLR 163 615 0 672 269 128 0 chr10 124116158 124116385 -21472903 - MIR SINE MIR 0 262 7 450 285 37 30 chr10 124117724 124117963 -21471325 - MIR SINE MIR -10 252 12 334 224 143 0 chr10 124117982 124118080 -21471208 + MER81 DNA DNA 2 113 -1 203 361 50 17 chr10 124118749 124118868 -21470420 - MIR3 SINE MIR -84 124 2 209 219 42 135 chr10 124118920 124119016 -21470272 + L2 LINE L2 3161 3247 -25 273 277 46 0 chr10 124119104 124119169 -21470119 + MIR SINE MIR 52 119 -143 282 303 41 16 chr10 124119783 124119905 -21469383 + MIR SINE MIR 23 147 -61 2347 73 16 26 chr10 124119914 124120227 -21469061 + AluSx SINE Alu 1 310 -2 373 292 58 67 chr10 124120309 124120549 -21468739 - MLT1K LTR MaLR -163 425 188 192 200 0 0 chr10 124120728 124120773 -21468515 + (TG)n Simple_repeat Simple_repeat 2 46 0 516 258 40 26 chr10 124120839 124121041 -21468247 + MIR SINE MIR 60 262 0 490 290 15 8 chr10 124121981 124122112 -21467176 - L2 LINE L2 0 3313 3182 248 256 133 0 chr10 124122265 124122355 -21466933 - L1ME4a LINE L1 -3 6118 6017 803 281 33 0 chr10 124122384 124122658 -21466630 - L1ME4a LINE L1 -201 5920 5638 233 213 0 0 chr10 124122658 124122705 -21466583 - L2 LINE L2 -2 3311 3265 483 246 250 40 chr10 124123531 124123779 -21465509 + MLT1H LTR MaLR 248 547 -2 640 186 28 28 chr10 124125524 124125669 -21463619 - MER104 DNA Tc2 -1 179 35 536 228 28 7 chr10 124125708 124125853 -21463435 + MIR SINE MIR 69 216 -46 270 264 0 14 chr10 124125889 124125961 -21463327 + MIR SINE MIR 84 154 -108 309 268 9 54 chr10 124126394 124126506 -21462782 - MIR SINE MIR -74 188 82 1225 265 65 0 chr10 124126586 124126895 -21462393 + MLT1I LTR MaLR 81 409 0 294 235 15 0 chr10 124127186 124127254 -21462034 + MIR SINE MIR 84 152 -110 417 372 20 0 chr10 124127740 124127888 -21461400 + MIR3 SINE MIR 38 188 -20 1567 173 43 108 chr10 124127901 124128318 -21460970 + MLT1B LTR MaLR 1 390 0 189 326 25 71 chr10 124128339 124128535 -21460753 - L2 LINE L2 -234 3038 2852 236 295 0 13 chr10 124128645 124128723 -21460565 - MARNA DNA Mariner -244 342 266 219 268 18 0 chr10 124130412 124130468 -21458820 + MIR SINE MIR 89 145 -63 497 222 9 0 chr10 124130543 124130651 -21458637 + MIR SINE MIR 154 262 0 217 303 26 0 chr10 124131889 124131965 -21457323 + MIR SINE MIR 65 142 -66 497 332 35 0 chr10 124132047 124132279 -21457009 + MIR SINE MIR 20 259 -3 206 288 50 12 chr10 124132330 124132410 -21456878 + MIR SINE MIR 60 142 -66 559 179 27 18 chr10 124133076 124133188 -21456100 - MER81 DNA DNA -1 113 1 2203 98 14 3 chr10 124133552 124133871 -21455417 - AluSx SINE Alu 0 312 1 444 354 23 8 chr10 124134079 124134336 -21454952 - MIR SINE MIR -1 261 1 225 333 0 0 chr10 124134480 124134537 -21454751 + (CA)n Simple_repeat Simple_repeat 1 57 0 213 304 0 14 chr10 124135204 124135273 -21454015 + C-rich Low_complexity Low_complexity 2 69 0 216 122 0 0 chr10 124135974 124136015 -21453273 + (TG)n Simple_repeat Simple_repeat 2 42 0 207 0 0 0 chr10 124136044 124136067 -21453221 + (T)n Simple_repeat Simple_repeat 1 23 0 747 284 41 90 chr10 124136950 124137486 -21451802 - MLT1J LTR MaLR -1 510 1 287 291 78 24 chr10 124137520 124137687 -21451601 - MIR3 SINE MIR -72 136 9 195 276 204 0 chr10 124138897 124138995 -21450293 - MIR3 SINE MIR -41 167 50 2874 154 63 8 chr10 124139400 124139926 -21449362 - MER89 LTR ERV1 -4 555 1 465 171 13 0 chr10 124140315 124140391 -21448897 - L1MD2 LINE L1 -216 6143 6067 4253 160 16 54 chr10 124140408 124140894 -21448394 - L1MD2 LINE L1 -279 6080 5641 1809 161 0 19 chr10 124140894 124141204 -21448084 - AluSx SINE Alu -8 304 1 4253 160 16 54 chr10 124141204 124141612 -21447676 - L1MD2 LINE L1 -718 5641 5219 240 360 12 0 chr10 124142276 124142362 -21446926 - L2 LINE L2 -39 3233 3147 232 301 97 0 chr10 124143399 124143492 -21445796 + L2 LINE L2 3171 3272 0 553 197 8 17 chr10 124143621 124143738 -21445550 - MER103 DNA DNA -49 117 2 1378 262 64 76 chr10 124144378 124144969 -21444319 - MLT1K LTR MaLR -3 585 2 216 0 0 0 chr10 124145630 124145654 -21443634 + (T)n Simple_repeat Simple_repeat 1 24 0 440 247 146 25 chr10 124145735 124145893 -21443395 + MIR SINE MIR 27 203 -59 318 206 48 56 chr10 124146279 124146405 -21442883 - MIR SINE MIR -36 226 102 1575 124 17 0 chr10 124146669 124146910 -21442378 - L1PA16 LINE L1 -9 6157 5913 332 275 117 25 chr10 124146950 124147070 -21442218 + L2 LINE L2 3183 3313 0 306 0 0 0 chr10 124147968 124148002 -21441286 + (CAA)n Simple_repeat Simple_repeat 3 36 0 686 314 29 4 chr10 124148100 124148342 -21440946 + MIR SINE MIR 1 248 -14 3261 134 94 32 chr10 124148589 124149186 -21440102 - MER51A LTR ERV1 0 634 1 255 270 14 14 chr10 124149212 124149286 -21440002 - MER5B DNA MER1_type 0 178 105 248 160 40 0 chr10 124149905 124149955 -21439333 - MLT1J2 LTR MaLR -286 164 113 1122 249 104 25 chr10 124150212 124150577 -21438711 + MLT1I LTR MaLR 16 409 0 335 216 0 57 chr10 124151204 124151292 -21437996 - MIR3 SINE MIR -30 178 96 202 318 11 23 chr10 124151476 124151564 -21437724 - MIR SINE MIR -116 146 60 1883 200 51 23 chr10 124151571 124152042 -21437246 - MLT1D LTR MaLR 0 505 22 420 314 69 0 chr10 124152825 124152984 -21436304 - MIR SINE MIR -70 192 23 194 125 0 25 chr10 124153461 124153501 -21435787 + (TTTTC)n Simple_repeat Simple_repeat 2 40 0 2690 96 8 8 chr10 124153788 124154163 -21435125 + THE1C LTR MaLR 1 375 0 445 283 101 0 chr10 124154558 124154696 -21434592 + LTR16A1 LTR ERVL 301 452 -5 424 302 72 16 chr10 124154874 124155179 -21434109 + L1ME LINE L1 2717 3038 -3177 268 306 68 47 chr10 124155285 124155431 -21433857 + L1ME LINE L1 3178 3319 -2896 1485 187 29 13 chr10 124155431 124155741 -21433547 - L1MD2 LINE L1 -2 6357 6043 268 306 68 47 chr10 124155741 124156153 -21433135 + L1ME LINE L1 3319 3748 -2467 427 325 58 41 chr10 124156174 124156738 -21432550 + L1ME LINE L1 3812 4385 -1830 2192 278 69 54 chr10 124156763 124158193 -21431095 + L1ME1 LINE L1 36 1487 -4909 441 227 30 102 chr10 124158200 124158245 -21431043 - MER106B DNA MER1_type -3 1056 1009 2350 104 0 0 chr10 124158245 124158552 -21430736 - AluY SINE Alu -4 307 1 441 227 30 102 chr10 124158552 124158748 -21430540 - MER106B DNA MER1_type -50 1009 4 1590 253 20 27 chr10 124158916 124159025 -21430263 + L1ME1 LINE L1 1753 1861 -4535 2052 156 0 0 chr10 124159025 124159327 -21429961 - AluJb SINE Alu -10 302 1 1590 253 20 27 chr10 124159327 124159778 -21429510 + L1ME1 LINE L1 1861 2309 -4087 3639 301 60 13 chr10 124159796 124160665 -21428623 + L1ME1 LINE L1 2978 3805 -2448 1530 121 5 0 chr10 124160665 124160872 -21428416 + AluSg/x SINE Alu 96 303 -7 3639 301 60 13 chr10 124160872 124161630 -21427658 + L1ME1 LINE L1 3805 6253 0 228 265 171 74 chr10 124161743 124161848 -21427440 + L1ME LINE L1 4478 4571 -1644 2193 115 3 0 chr10 124161848 124162175 -21427113 - AluSq SINE Alu 0 328 1 228 265 171 74 chr10 124162175 124162460 -21426828 + L1ME LINE L1 4571 4907 -1308 468 272 60 15 chr10 124162520 124162772 -21426516 + L1ME LINE L1 4979 5240 -975 235 271 193 7 chr10 124162949 124163089 -21426199 + L1ME LINE L1 5433 5598 -637 2437 126 72 20 chr10 124164388 124164793 -21424495 - MSTB LTR MaLR 0 426 1 1931 148 3 20 chr10 124165078 124165375 -21423913 - AluSx SINE Alu -20 292 1 214 200 38 50 chr10 124165558 124165638 -21423650 + CT-rich Low_complexity Low_complexity 3 81 0 21 0 0 0 chr10 124165862 124165883 -21423405 + AT_rich Low_complexity Low_complexity 1 21 0 1874 153 0 27 chr10 124166636 124166937 -21422351 - AluJb SINE Alu -19 293 1 210 263 40 26 chr10 124167113 124167189 -21422099 + MIR SINE MIR 110 186 -76 307 273 73 9 chr10 124167288 124167398 -21421890 + MIR SINE MIR 68 184 -78 212 239 45 15 chr10 124167439 124167506 -21421782 - L2 LINE L2 0 3313 3245 180 111 0 0 chr10 124168678 124168705 -21420583 + (A)n Simple_repeat Simple_repeat 1 27 0 397 282 112 24 chr10 124169978 124170184 -21419104 + Charlie8 DNA MER1_type 11 234 -2183 526 269 48 6 chr10 124171259 124171426 -21417862 - MIR SINE MIR -56 206 33 1957 161 0 7 chr10 124171737 124172042 -21417246 - AluJb SINE Alu -9 303 1 916 266 130 49 chr10 124172738 124173207 -21416081 - MLT1J LTR MaLR 0 511 5 859 286 88 24 chr10 124174549 124174969 -21414319 - MLT1J LTR MaLR -7 504 58 446 240 31 0 chr10 124174963 124175059 -21414229 + MER99 DNA DNA 6 104 -724 * 387 145 0 0 chr10 124175069 124175131 -21414157 - L1PA13 LINE L1 -11 6152 6091 3294 173 76 18 chr10 124175881 124176565 -21412723 + MER99 DNA DNA 104 827 -1 805 249 11 6 chr10 124176649 124176826 -21412462 - MER45A DNA AcHobo 0 178 1 367 197 0 0 chr10 124176869 124176945 -21412343 - L1ME LINE L1 -303 5818 5743 195 316 92 41 chr10 124177633 124177731 -21411557 + MIR SINE MIR 48 150 -112 1016 194 0 26 chr10 124177745 124177936 -21411352 - MER58A DNA MER1_type -1 223 38 204 283 19 0 chr10 124177956 124178009 -21411279 + MIR SINE MIR 158 211 -51 1463 138 13 4 chr10 124178413 124178652 -21410636 - L1MB1 LINE L1 -1 6167 5927 863 183 0 0 chr10 124178921 124179058 -21410230 + FRAM SINE Alu 23 159 -17 216 167 0 0 chr10 124179636 124179672 -21409616 - L2 LINE L2 -9 3304 3269 275 287 116 37 chr10 124179918 124180008 -21409280 - MIR SINE MIR -10 252 171 2310 128 126 5 chr10 124180008 124180390 -21408898 + MSTA LTR MaLR 1 428 0 275 287 116 37 chr10 124180390 124180463 -21408825 - MIR SINE MIR -91 171 76 1052 177 11 11 chr10 124180750 124180936 -21408352 + MER5A DNA MER1_type 4 189 0 5587 114 27 0 chr10 124181216 124182284 -21407004 - L1PA16 LINE L1 -7 6159 5062 524 222 227 0 chr10 124183364 124183540 -21405748 - L1ME4a LINE L1 -13 6108 5893 233 258 135 11 chr10 124183624 124183713 -21405575 + L2 LINE L2 3168 3267 -5 1082 280 45 29 chr10 124183965 124184347 -21404941 + LTR16C LTR ERVL 100 487 -4 382 270 18 9 chr10 124185571 124185682 -21403606 + MLT1J2 LTR MaLR 1 112 -338 420 256 59 64 chr10 124185779 124185982 -21403306 + MLT1J2 LTR MaLR 249 450 0 323 282 65 8 chr10 124186776 124186900 -21402388 + MIR SINE MIR 62 192 -70 195 139 0 0 chr10 124187774 124187810 -21401478 + (TC)n Simple_repeat Simple_repeat 1 36 0 21 36 0 0 chr10 124188403 124188431 -21400857 + AT_rich Low_complexity Low_complexity 1 28 0 244 290 140 0 chr10 124189678 124189771 -21399517 - MIR SINE MIR -60 148 43 1157 194 123 62 chr10 124190179 124190614 -21398674 + MER31B LTR ERV1 1 661 0 2684 7 3 0 chr10 124190701 124191034 -21398254 - AluYb8 SINE Alu 0 334 1 262 224 15 0 chr10 124191227 124191294 -21397994 + MIR SINE MIR 79 146 -116 1184 262 37 44 chr10 124193051 124193568 -21395720 + L2 LINE L2 2777 3293 -20 2279 98 10 3 chr10 124193589 124193886 -21395402 + AluSq SINE Alu 1 299 -14 455 221 157 91 chr10 124194446 124194793 -21394495 + MLT1H LTR MaLR 60 450 0 658 300 73 0 chr10 124195547 124195780 -21393508 - MIR SINE MIR 0 262 13 432 55 0 0 chr10 124195912 124195967 -21393321 + (CA)n Simple_repeat Simple_repeat 2 56 0 235 244 39 110 chr10 124197312 124197439 -21391849 - L2 LINE L2 -19 3253 3136 250 314 8 40 chr10 124197735 124197859 -21391429 - MIR3 SINE MIR -25 183 64 276 274 32 32 chr10 124198081 124198128 -21391160 + MLT1L LTR MaLR 490 536 -79 1318 170 13 13 chr10 124198128 124198363 -21390925 - MER46A DNA MER2_type -1 235 1 276 274 32 32 chr10 124198363 124198439 -21390849 + MLT1L LTR MaLR 535 613 -2 1672 154 12 41 chr10 124198542 124198887 -21390401 - L1MB7 LINE L1 -16 6666 6332 502 188 12 0 chr10 124198887 124198972 -21390316 + Tigger5 DNA MER2_type 10 95 -2228 * 770 171 8 0 chr10 124198967 124199096 -21390192 + Tigger5 DNA MER2_type 2194 2323 0 2769 184 59 30 chr10 124199102 124199977 -21389311 - L1MB7 LINE L1 -353 6319 5396 759 235 52 0 chr10 124199977 124200130 -21389158 - FRAM SINE Alu -2 164 4 2769 184 59 30 chr10 124200130 124200445 -21388843 - L1MB7 LINE L1 -1276 5396 5092 1797 176 40 9 chr10 124200498 124200827 -21388461 + MLT1A1 LTR MaLR 25 363 -2 1368 173 18 3 chr10 124200830 124201113 -21388175 - L1MB7 LINE L1 -1550 5094 4808 9418 96 13 12 chr10 124201115 124201761 -21387527 + HSMAR1 DNA Mariner 9 659 -628 2294 120 0 0 chr10 124201761 124202069 -21387219 + AluSx SINE Alu 1 308 -4 9418 96 13 12 chr10 124202069 124202698 -21386590 + HSMAR1 DNA Mariner 659 1286 -1 21 71 0 0 chr10 124202698 124202740 -21386548 + AT_rich Low_complexity Low_complexity 1 42 0 1469 222 18 18 chr10 124202742 124203085 -21386203 - L1MB7 LINE L1 -1845 4799 4457 5082 209 45 50 chr10 124203087 124204714 -21384574 - L1MB7 LINE L1 -3625 3019 1385 441 36 0 0 chr10 124204714 124204769 -21384519 + (TG)n Simple_repeat Simple_repeat 2 56 0 5082 209 45 50 chr10 124204769 124205202 -21384086 - L1MB7 LINE L1 -5259 1385 951 1508 201 27 0 chr10 124205202 124205321 -21383967 + AluJo SINE Alu 1 115 -197 222 37 0 0 chr10 124205321 124205348 -21383940 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1508 201 27 0 chr10 124205348 124205522 -21383766 + AluJo SINE Alu 115 302 -10 5082 209 45 50 chr10 124205522 124205855 -21383433 - L1MB7 LINE L1 -5693 951 512 264 232 49 0 chr10 124205976 124206058 -21383230 + CT-rich Low_complexity Low_complexity 1 86 0 348 284 11 0 chr10 124206069 124206157 -21383131 - L2 LINE L2 -37 3276 3188 2281 113 3 0 chr10 124206286 124206588 -21382700 + AluSx SINE Alu 1 303 -9 2256 118 0 0 chr10 124206814 124207110 -21382178 - AluSx SINE Alu -16 296 1 189 0 0 0 chr10 124207295 124207316 -21381972 + (A)n Simple_repeat Simple_repeat 1 21 0 286 299 26 0 chr10 124207870 124207947 -21381341 - MER81 DNA DNA 0 114 36 248 296 25 0 chr10 124208853 124208934 -21380354 - MIR SINE MIR -26 236 154 244 189 19 19 chr10 124208935 124208988 -21380300 - MER46C DNA MER2_type 0 338 286 812 175 0 15 chr10 124208997 124209134 -21380154 + AluJb SINE Alu 1 135 -177 1336 97 10 5 chr10 124209142 124209337 -21379951 + L1PB2 LINE L1 5954 6149 -2 967 190 19 126 chr10 124209365 124209675 -21379613 - MER46C DNA MER2_type -61 277 1 525 173 28 134 chr10 124211260 124211439 -21377849 + MER104 DNA Tc2 8 167 -13 259 230 201 11 chr10 124211457 124211555 -21377733 - MIR SINE MIR -85 123 31 413 293 64 11 chr10 124211894 124212071 -21377217 + MIR SINE MIR 3 185 -63 219 103 0 0 chr10 124212152 124212191 -21377097 + (ATG)n Simple_repeat Simple_repeat 3 41 0 235 275 9 45 chr10 124212813 124212928 -21376360 - MIR SINE MIR -82 126 7 284 293 10 20 chr10 124213498 124213597 -21375691 + L2 LINE L2 2965 3062 -251 262 266 76 13 chr10 124213662 124213741 -21375547 + L2 LINE L2 3189 3272 0 567 325 22 22 chr10 124214377 124214608 -21374680 + MIR SINE MIR 32 262 0 185 65 32 0 chr10 124214696 124214727 -21374561 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 2035 150 0 0 chr10 124214726 124215036 -21374252 - AluSx SINE Alu 0 311 2 438 268 39 34 chr10 124215208 124215387 -21373901 - MER117 DNA MER1_type -15 182 3 199 267 119 10 chr10 124215867 124215968 -21373320 - L2 LINE L2 -961 2353 2242 1003 263 8 25 chr10 124216344 124216587 -21372701 + MIR SINE MIR 12 250 -12 936 234 62 4 chr10 124217165 124217409 -21371879 - MIR SINE MIR 0 262 5 240 328 98 8 chr10 124218229 124218351 -21370937 - L2 LINE L2 0 3313 3181 539 328 73 35 chr10 124218750 124218982 -21370306 + MIR SINE MIR 21 261 -1 543 258 29 98 chr10 124219439 124219683 -21369605 - MIR SINE MIR -27 235 9 575 288 20 18 chr10 124220937 124221155 -21368133 + MIR SINE MIR 1 212 -50 1797 181 14 3 chr10 124221179 124221467 -21367821 + AluJb SINE Alu 1 291 -21 1721 166 39 3 chr10 124222724 124223007 -21366281 + AluJb SINE Alu 1 293 -19 720 214 0 0 chr10 124223782 124223899 -21365389 - FLAM_C SINE Alu -16 117 1 1987 118 57 0 chr10 124223910 124224189 -21365099 - AluSc SINE Alu -14 295 1 30 45 0 0 chr10 124224287 124224331 -21364957 + AT_rich Low_complexity Low_complexity 1 44 0 574 273 84 44 chr10 124224365 124224614 -21364674 - HAL1 LINE L1 -4 2503 2245 2246 117 3 0 chr10 124224817 124225117 -21364171 - AluSx SINE Alu -11 301 1 600 295 86 44 chr10 124225552 124226132 -21363156 - L2 LINE L2 -2 3270 2660 1705 125 114 7 chr10 124226147 124226419 -21362869 - AluSx SINE Alu -11 301 1 746 234 38 55 chr10 124227234 124227469 -21361819 + MIR SINE MIR 1 231 -31 361 292 58 8 chr10 124227557 124227677 -21361611 - LTR33A LTR ERVL -327 196 71 3924 65 35 0 chr10 124227678 124228186 -21361102 - L1PA8 LINE L1 -2 6170 5645 393 57 0 0 chr10 124228196 124228249 -21361039 + MADE1 DNA Mariner 28 80 0 2873 122 16 0 chr10 124228347 124228774 -21360514 - MER57B LTR ERV1 0 434 1 2154 134 0 0 chr10 124228838 124229129 -21360159 + AluSx SINE Alu 1 291 -21 1427 123 4 71 chr10 124229358 124229610 -21359678 + L1PA16 LINE L1 5931 6165 -1 1967 133 26 23 chr10 124229817 124230126 -21359162 + AluSx SINE Alu 1 310 -2 303 44 22 0 chr10 124230437 124230482 -21358806 + MADE1 DNA Mariner 1 46 -34 189 309 0 0 chr10 124230571 124230626 -21358662 - MIR SINE MIR -50 212 158 267 208 104 144 chr10 124231038 124231171 -21358117 + Charlie8 DNA MER1_type 35 172 -275 2154 137 0 6 chr10 124231171 124231484 -21357804 + AluSx SINE Alu 1 311 -1 267 208 104 144 chr10 124231484 124231510 -21357778 + Charlie8 DNA MER1_type 172 197 -250 1164 68 11 11 chr10 124231510 124231687 -21357601 + (GAAA)n Simple_repeat Simple_repeat 4 180 0 267 208 104 144 chr10 124231687 124231802 -21357486 + Charlie8 DNA MER1_type 197 265 -182 483 192 256 35 chr10 124232180 124232383 -21356905 - MLT1D LTR MaLR -2 503 256 230 29 59 0 chr10 124232410 124232444 -21356844 + (TTCTC)n Simple_repeat Simple_repeat 1 36 0 236 261 109 51 chr10 124232831 124232969 -21356319 - L2 LINE L2 0 3313 3168 2185 126 0 0 chr10 124233053 124233346 -21355942 - AluSx SINE Alu -14 298 6 403 320 83 36 chr10 124233475 124233812 -21355476 - L2 LINE L2 -438 2876 2524 311 322 34 8 chr10 124234199 124234317 -21354971 - MIR SINE MIR -65 143 23 234 234 0 31 chr10 124234440 124234504 -21354784 - MIR SINE MIR -20 242 181 2360 103 0 0 chr10 124234931 124235233 -21354055 - AluSx SINE Alu -10 302 1 603 252 25 44 chr10 124235393 124235552 -21353736 - MIR SINE MIR -20 242 87 363 256 211 6 chr10 124236123 124236279 -21353009 - MIR SINE MIR -6 256 69 1487 157 3 97 chr10 124237083 124237383 -21351905 - AluJo SINE Alu -16 296 25 190 345 42 30 chr10 124237407 124237572 -21351716 + L2 LINE L2 2550 2716 -598 1396 81 6 6 chr10 124237572 124237746 -21351542 + AluSp SINE Alu 1 174 -139 233 370 0 0 chr10 124237749 124237830 -21351458 - L2 LINE L2 -30 3283 3203 587 286 68 103 chr10 124237838 124237938 -21351350 - L2 LINE L2 -446 2868 2766 2305 119 0 0 chr10 124237938 124238241 -21351047 + AluSq SINE Alu 1 303 -10 587 286 68 103 chr10 124238241 124238266 -21351022 - L2 LINE L2 -548 2766 2742 2481 84 0 0 chr10 124238266 124238564 -21350724 - AluY SINE Alu -13 298 1 587 286 68 103 chr10 124238564 124238616 -21350672 - L2 LINE L2 -572 2742 2690 2316 112 3 0 chr10 124238616 124238928 -21350360 - AluSp SINE Alu 0 313 1 587 286 68 103 chr10 124238928 124239202 -21350086 - L2 LINE L2 -624 2690 2431 23 0 0 0 chr10 124240019 124240042 -21349246 + AT_rich Low_complexity Low_complexity 1 23 0 845 267 90 10 chr10 124240093 124240393 -21348895 + LTR16A LTR ERVL 121 444 -6 507 261 101 40 chr10 124240604 124240803 -21348485 + MIR SINE MIR 8 218 -44 406 214 155 0 chr10 124241156 124241259 -21348029 + L2 LINE L2 3193 3311 -2 479 261 0 0 chr10 124241481 124241592 -21347696 + MER58A DNA MER1_type 46 156 0 753 253 45 15 chr10 124241810 124242012 -21347276 - MIR SINE MIR -32 230 23 1943 173 0 3 chr10 124242152 124242459 -21346829 + AluJb SINE Alu 1 306 -6 211 259 0 59 chr10 124243489 124243574 -21345714 + L2 LINE L2 3192 3271 -1 444 260 73 64 chr10 124243730 124243934 -21345354 - L2 LINE L2 -1 3312 3107 2216 126 0 0 chr10 124244110 124244426 -21344862 + AluSx SINE Alu 1 312 0 508 239 126 36 chr10 124246576 124246743 -21342545 + MIR SINE MIR 22 203 -59 411 337 144 0 chr10 124247702 124247904 -21341384 - MIR SINE MIR -2 260 30 209 214 54 18 chr10 124248328 124248384 -21340904 - MIR SINE MIR -108 154 97 353 245 54 61 chr10 124248847 124248994 -21340294 + Charlie8 DNA MER1_type 73 218 -2199 1661 162 32 41 chr10 124249017 124249332 -21339956 + AluJo SINE Alu 1 312 0 714 201 0 8 chr10 124249392 124249526 -21339762 - FLAM_C SINE Alu 0 133 1 634 299 57 20 chr10 124250349 124250593 -21338695 - MIR SINE MIR 0 262 10 594 238 81 53 chr10 124250811 124251245 -21338043 + MER113 DNA MER1_type? 1 501 -20 2244 112 0 0 chr10 124251440 124251736 -21337552 - AluSx SINE Alu -16 296 1 257 270 0 16 chr10 124251994 124252057 -21337231 - MIR SINE MIR -115 147 86 509 277 13 39 chr10 124252133 124252288 -21337000 + MER5A DNA MER1_type 39 189 0 402 303 28 7 chr10 124252491 124252636 -21336652 + MIR3 SINE MIR 37 184 -24 226 65 43 109 chr10 124252877 124252903 -21336385 + L1MB4 LINE L1 5441 5464 -702 3678 188 12 6 chr10 124252903 124253627 -21335661 + L1MB4 LINE L1 5446 6174 -6 226 65 43 109 chr10 124253627 124253646 -21335642 + L1MB4 LINE L1 5464 5483 -683 2258 109 3 3 chr10 124255019 124255322 -21333966 - AluSx SINE Alu -9 303 1 617 333 25 8 chr10 124255480 124255717 -21333571 + MIR SINE MIR 11 251 -11 2649 90 28 3 chr10 124256572 124256927 -21332361 - THE1B LTR MaLR 0 364 1 720 238 54 60 chr10 124257220 124257429 -21331859 - L1MC4 LINE L1 -3 8039 7831 2291 96 7 0 chr10 124257429 124257722 -21331566 - AluY SINE Alu -16 295 1 720 238 54 60 chr10 124257722 124257848 -21331440 - L1MC4 LINE L1 -211 7831 7706 2155 152 56 22 chr10 124257849 124258258 -21331030 - MSTB1 LTR MaLR 0 432 10 686 216 49 84 chr10 124258275 124258582 -21330706 - L1MC4 LINE L1 -195 7674 7332 560 183 325 0 chr10 124258788 124258957 -21330331 - MER58A DNA MER1_type 0 224 1 862 258 181 35 chr10 124259052 124259550 -21329738 - L2 LINE L2 0 3313 2731 268 287 69 0 chr10 124259628 124259715 -21329573 + MIR SINE MIR 98 190 -72 314 274 83 0 chr10 124260352 124260436 -21328852 - MIR SINE MIR -57 151 61 375 229 171 0 chr10 124261437 124261542 -21327746 - MER91B DNA MER1_type -66 124 2 642 226 37 55 chr10 124261557 124261774 -21327514 + L3 LINE CR1 1276 1488 -89 332 270 60 65 chr10 124262727 124262912 -21326376 + MIR SINE MIR 79 262 0 1905 205 19 83 chr10 124263644 124264220 -21325068 - MLT1H LTR MaLR 0 549 11 787 246 96 12 chr10 124266076 124266316 -21322972 + MIR SINE MIR 1 260 -2 207 272 95 68 chr10 124266486 124266633 -21322655 - MIR3 SINE MIR -34 174 24 529 257 101 0 chr10 124267135 124267283 -21322005 - MIR3 SINE MIR -6 202 40 252 86 0 0 chr10 124267505 124267540 -21321748 + (TG)n Simple_repeat Simple_repeat 2 36 0 192 164 41 96 chr10 124268030 124268103 -21321185 + L2 LINE L2 400 468 -2846 283 256 47 0 chr10 124268741 124268827 -21320461 - MIR SINE MIR -70 192 103 404 297 89 0 chr10 124268907 124269083 -21320205 - MIR3 SINE MIR -11 197 3 315 296 81 49 chr10 124270126 124270351 -21318937 - MIR SINE MIR -6 256 16 371 158 9 123 chr10 124271485 124271557 -21317731 - MLT1I LTR MaLR -15 394 338 1816 166 36 10 chr10 124271557 124271858 -21317430 + AluJb SINE Alu 1 309 -3 371 158 9 123 chr10 124271858 124271899 -21317389 - MLT1I LTR MaLR -71 338 294 2394 104 3 0 chr10 124272354 124272663 -21316625 - AluSg SINE Alu 0 310 1 353 247 0 0 chr10 124273529 124273602 -21315686 - L2 LINE L2 -10 3262 3190 311 333 21 7 chr10 124273753 124273894 -21315394 + L2 LINE L2 2920 3062 -210 187 250 0 0 chr10 124274279 124274319 -21314969 - L2 LINE L2 -4 3309 3270 421 320 0 8 chr10 124274937 124275065 -21314223 + L2 LINE L2 3187 3313 0 244 250 56 14 chr10 124275698 124275770 -21313518 - MIR SINE MIR -69 139 65 230 290 0 29 chr10 124277170 124277239 -21312049 + MIR SINE MIR 20 86 -176 192 77 0 0 chr10 124278022 124278048 -21311240 + (TCCA)n Simple_repeat Simple_repeat 1 26 0 205 309 75 32 chr10 124278056 124278150 -21311138 - L2 LINE L2 -38 3234 3137 372 287 133 0 chr10 124278733 124278883 -21310405 - MIR SINE MIR -53 209 40 2220 107 10 16 chr10 124279623 124279931 -21309357 + AluSx SINE Alu 7 312 0 182 341 98 30 chr10 124279972 124280136 -21309152 + MIR SINE MIR 27 201 -61 605 250 186 11 chr10 124280242 124280430 -21308858 - MIR SINE MIR -19 243 23 369 299 41 0 chr10 124282657 124282754 -21306534 + MIR3 SINE MIR 77 177 -31 653 279 81 20 chr10 124282758 124283005 -21306283 + MIR SINE MIR 1 262 0 439 204 37 46 chr10 124283560 124283726 -21305562 + MIR SINE MIR 36 196 -58 326 272 69 86 chr10 124283883 124284173 -21305115 - MER5C DNA MER1_type 0 324 40 460 303 133 28 chr10 124284230 124284448 -21304840 - MIR SINE MIR -20 242 2 317 216 95 78 chr10 124287953 124288069 -21301219 - MIR3 SINE MIR -15 193 76 391 264 25 107 chr10 124289311 124289508 -21299780 - MIR SINE MIR -1 261 81 187 267 144 44 chr10 124289510 124289600 -21299688 - MIR SINE MIR -145 117 19 184 278 144 21 chr10 124291034 124291131 -21298157 + MIR SINE MIR 30 138 -124 243 0 0 0 chr10 124292734 124292761 -21296527 + (TC)n Simple_repeat Simple_repeat 2 28 0 1696 162 7 35 chr10 124292762 124293052 -21296236 - AluJb SINE Alu -30 282 1 194 114 159 23 chr10 124293157 124293201 -21296087 + MIR SINE MIR 12 61 -201 254 391 0 0 chr10 124293218 124293305 -21295983 + MIR SINE MIR 21 107 -101 510 282 100 12 chr10 124293305 124293475 -21295813 + MIR SINE MIR 73 257 -5 267 225 141 54 chr10 124293469 124293603 -21295685 - MIR SINE MIR -64 144 18 * 2012 150 26 13 chr10 124294445 124294751 -21294537 - AluJb SINE Alu -2 310 1 373 291 91 0 chr10 124294751 124294861 -21294427 - MIR SINE MIR -59 149 30 922 208 33 19 chr10 124295413 124295625 -21293663 + MER20 DNA MER1_type 5 219 0 376 258 21 0 chr10 124295775 124295868 -21293420 - MIR SINE MIR -139 123 29 874 290 51 83 chr10 124296221 124296693 -21292595 + L2 LINE L2 2837 3293 -20 2257 112 0 0 chr10 124296695 124296982 -21292306 - AluSg SINE Alu -17 293 7 22 0 0 0 chr10 124298863 124298885 -21290403 + AT_rich Low_complexity Low_complexity 1 22 0 2214 104 6 29 chr10 124299359 124299494 -21289794 + AluSg SINE Alu 1 137 -203 2050 115 7 0 chr10 124299494 124299824 -21289464 + AluSx SINE Alu 1 332 0 2214 104 6 29 chr10 124299824 124300034 -21289254 + AluSg SINE Alu 137 340 0 306 313 252 0 chr10 124300627 124300774 -21288514 - MER5A DNA MER1_type 0 189 6 2204 119 6 10 chr10 124301439 124301750 -21287538 + AluSx SINE Alu 2 311 -1 290 259 43 79 chr10 124301761 124301900 -21287388 - MER5A DNA MER1_type -48 141 8 413 303 37 12 chr10 124302213 124302375 -21286913 - MIR SINE MIR -76 186 21 2359 105 3 6 chr10 124302628 124302941 -21286347 + AluSx SINE Alu 1 312 0 443 210 188 54 chr10 124304428 124304614 -21284674 + MIR SINE MIR 52 262 0 366 336 78 4 chr10 124305881 124306069 -21283219 + MIR SINE MIR 17 214 -47 409 226 32 91 chr10 124306185 124306371 -21282917 - MER102b DNA MER1_type 0 341 167 496 269 54 7 chr10 124306507 124306656 -21282632 - MIR3 SINE MIR -7 201 46 735 184 27 0 chr10 124308071 124308218 -21281070 - MER45A DNA AcHobo 0 178 28 909 201 101 0 chr10 124310964 124311143 -21278145 + MER58A DNA MER1_type 28 224 0 2229 127 3 0 chr10 124311225 124311532 -21277756 + AluSx SINE Alu 1 308 -4 752 213 149 5 chr10 124312407 124312595 -21276693 + MER20 DNA MER1_type 3 217 -2 243 0 0 0 chr10 124313875 124313902 -21275386 + (CA)n Simple_repeat Simple_repeat 2 28 0 233 128 21 0 chr10 124314374 124314421 -21274867 + (CA)n Simple_repeat Simple_repeat 1 48 0 210 284 90 0 chr10 124315343 124315410 -21273878 + MER5C DNA MER1_type 3 75 -249 285 345 21 41 chr10 124315620 124315765 -21273523 - MIR SINE MIR -109 153 12 203 290 65 0 chr10 124315779 124315841 -21273447 + MIR3 SINE MIR 91 156 -52 325 290 136 12 chr10 124315862 124316024 -21273264 - MIR SINE MIR 0 262 81 555 286 65 0 chr10 124316900 124317085 -21272203 - MIR SINE MIR -47 215 19 219 339 24 8 chr10 124319041 124319165 -21270123 + MIR SINE MIR 41 166 -96 313 282 183 0 chr10 124320256 124320387 -21268901 + MIR SINE MIR 1 155 -107 269 261 39 100 chr10 124320693 124320738 -21268550 - MIR3 SINE MIR -21 187 141 2083 114 0 7 chr10 124320738 124321028 -21268260 - AluSg SINE Alu -2 308 21 269 261 39 100 chr10 124321028 124321112 -21268176 - MIR3 SINE MIR -67 141 66 398 261 195 15 chr10 124322655 124322850 -21266438 + MIR SINE MIR 23 252 -10 623 189 6 28 chr10 124322879 124323059 -21266229 + (ATGGTG)n Simple_repeat Simple_repeat 3 178 0 182 319 29 94 chr10 124323077 124323215 -21266073 + MIR SINE MIR 16 144 -64 376 294 9 0 chr10 124323708 124323817 -21265471 + L2 LINE L2 3204 3313 0 365 284 78 17 chr10 124324738 124324910 -21264378 + MIR SINE MIR 42 221 -41 295 314 0 29 chr10 124325021 124325123 -21264165 - MIR SINE MIR -140 122 24 986 219 57 38 chr10 124326210 124326525 -21262763 + L1MC5 LINE L1 7605 7925 -36 899 264 72 21 chr10 124326938 124327285 -21262003 + L1ME3A LINE L1 5304 5673 -491 2006 156 0 0 chr10 124327983 124328290 -21260998 - AluSx SINE Alu -5 307 1 536 276 25 12 chr10 124329328 124329491 -21259797 - Charlie8 DNA MER1_type -2181 236 72 2269 109 0 0 chr10 124329504 124329807 -21259481 + AluSg SINE Alu 1 303 -7 834 214 41 9 chr10 124329940 124330160 -21259128 - MIR SINE MIR 0 262 36 2404 78 7 0 chr10 124330419 124330715 -21258573 + AluSp SINE Alu 1 298 -15 421 317 126 10 chr10 124331384 124331520 -21257768 - Charlie8 DNA MER1_type -107 234 66 180 0 0 0 chr10 124331520 124331540 -21257748 + (CAA)n Simple_repeat Simple_repeat 2 21 0 421 317 126 10 chr10 124331540 124331602 -21257686 - Charlie8 DNA MER1_type -275 66 13 225 0 0 0 chr10 124331869 124331894 -21257394 + (A)n Simple_repeat Simple_repeat 1 25 0 197 211 14 99 chr10 124332043 124332114 -21257174 - L2 LINE L2 -5 3267 3203 389 152 43 43 chr10 124332369 124332461 -21256827 + L1ME4a LINE L1 6029 6120 -1 221 296 96 35 chr10 124333631 124333746 -21255542 + L2 LINE L2 3192 3313 0 380 205 24 55 chr10 124335058 124335185 -21254103 - MIR SINE MIR -66 196 74 203 273 61 0 chr10 124335414 124335480 -21253808 + MIR SINE MIR 129 198 -64 499 250 107 68 chr10 124336170 124336422 -21252866 + L1ME3A LINE L1 5896 6157 -13 243 179 134 45 chr10 124336810 124336836 -21252452 + L1ME4a LINE L1 5955 5977 -144 1600 106 4 21 chr10 124336836 124337072 -21252216 + AluSq SINE Alu 74 305 -8 243 179 134 45 chr10 124337072 124337112 -21252176 + L1ME4a LINE L1 5977 6027 -94 991 217 18 26 chr10 124337257 124337483 -21251805 - MER58A DNA MER1_type 0 224 1 206 250 0 19 chr10 124337489 124337541 -21251747 + MER5A DNA MER1_type 34 84 -105 2357 101 3 0 chr10 124338410 124338718 -21250570 - AluSp SINE Alu -4 309 1 188 159 0 23 chr10 124339360 124339404 -21249884 + A-rich Low_complexity Low_complexity 3 45 0 279 0 0 0 chr10 124341439 124341470 -21247818 + (TC)n Simple_repeat Simple_repeat 2 32 0 207 0 0 0 chr10 124341469 124341492 -21247796 + (TA)n Simple_repeat Simple_repeat 1 23 0 * 287 301 14 0 chr10 124343686 124343759 -21245529 + L2 LINE L2 3176 3249 -23 193 231 0 19 chr10 124343765 124343817 -21245471 - L2 LINE L2 -9 3263 3213 294 29 0 0 chr10 124343997 124344032 -21245256 + (A)n Simple_repeat Simple_repeat 1 35 0 317 298 38 0 chr10 124344729 124344860 -21244428 + MIR SINE MIR 124 259 -3 21 0 0 0 chr10 124345425 124345446 -21243842 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr10 124345947 124345972 -21243316 + AT_rich Low_complexity Low_complexity 1 25 0 263 209 0 45 chr10 124346196 124346257 -21243031 - MER58A DNA MER1_type 0 224 167 392 271 0 74 chr10 124346257 124346379 -21242909 - MER58A DNA MER1_type 0 113 1 3366 209 9 2 chr10 124346441 124347079 -21242209 + L1M2b LINE L1 1 643 -6566 1761 157 36 0 chr10 124347384 124347664 -21241624 - AluJb SINE Alu -18 294 5 190 326 0 79 chr10 124347702 124347791 -21241497 - L2 LINE L2 -82 3190 3109 385 267 27 62 chr10 124348049 124348109 -21241179 + MER5B DNA MER1_type 4 65 -113 2461 64 0 10 chr10 124348109 124348406 -21240882 + AluY SINE Alu 1 294 -17 385 267 27 62 chr10 124348406 124348491 -21240797 + MER5B DNA MER1_type 65 144 -34 325 70 0 0 chr10 124348765 124348808 -21240480 - AluSq/x SINE Alu -163 139 97 * 357 153 17 17 chr10 124348798 124348857 -21240431 - AluS SINE Alu -243 60 2 367 308 28 0 chr10 124348994 124349101 -21240187 + MLT1J LTR MaLR 290 399 -112 15448 54 71 4 chr10 124350238 124352259 -21237029 - L1P LINE L1 -3717 2429 274 301 356 0 48 chr10 124452259 124452405 -21136883 + L2 LINE L2 2952 3090 -182 217 289 0 19 chr10 124452437 124452489 -21136799 + L2 LINE L2 3205 3255 -17 372 309 33 40 chr10 124455113 124455308 -21133980 - MIR SINE MIR -49 213 16 521 286 71 15 chr10 124456177 124456373 -21132915 + MIR SINE MIR 8 214 -48 2206 84 14 0 chr10 124456407 124456535 -21132753 + AluSx SINE Alu 1 126 -186 324 0 0 0 chr10 124456535 124456571 -21132717 + (CAAAA)n Simple_repeat Simple_repeat 3 38 0 2206 84 14 0 chr10 124456571 124456739 -21132549 + AluSx SINE Alu 126 301 -11 23 0 0 0 chr10 124457752 124457775 -21131513 + AT_rich Low_complexity Low_complexity 1 23 0 283 291 192 20 chr10 124459718 124459859 -21129429 - MIR SINE MIR -10 252 82 2398 68 0 0 chr10 124459859 124460151 -21129137 - AluY SINE Alu -19 292 1 1693 132 62 31 chr10 124460194 124460483 -21128805 + AluJb SINE Alu 1 298 -14 2391 61 0 14 chr10 124463877 124464174 -21125114 - AluY SINE Alu -18 293 1 348 169 0 24 chr10 124464306 124464389 -21124899 - MER106B DNA MER1_type 0 1059 979 1463 153 130 13 chr10 124465296 124465604 -21123684 - MER2 DNA MER2_type 0 344 1 443 311 46 7 chr10 124465833 124465984 -21123304 - MIR SINE MIR -73 189 33 393 325 93 45 chr10 124465993 124466239 -21123049 - L2 LINE L2 -337 2977 2720 2333 104 0 0 chr10 124467248 124467545 -21121743 - AluSq SINE Alu -16 297 1 653 230 54 69 chr10 124467575 124467779 -21121509 - MER77 LTR ERV1 -404 201 1 369 0 0 0 chr10 124469130 124469171 -21120117 + (TG)n Simple_repeat Simple_repeat 2 42 0 2283 126 0 0 chr10 124471872 124472182 -21117106 - AluSx SINE Alu -2 310 1 200 273 26 39 chr10 124472482 124472559 -21116729 + L2 LINE L2 3142 3217 -55 2428 87 0 0 chr10 124472839 124473149 -21116139 - AluY SINE Alu -1 310 1 249 303 91 8 chr10 124474543 124474675 -21114613 + HAL1b LINE L1 1129 1271 -77 24 0 0 0 chr10 124474807 124474831 -21114457 + AT_rich Low_complexity Low_complexity 1 24 0 1630 146 117 78 chr10 124475970 124476241 -21113047 - MSTA LTR MaLR 0 428 134 2326 84 3 10 chr10 124476241 124476540 -21112748 - AluSx SINE Alu -15 297 1 1630 146 117 78 chr10 124476540 124476678 -21112610 - MSTA LTR MaLR -294 134 3 183 80 0 0 chr10 124476793 124476818 -21112470 + (TTTTA)n Simple_repeat Simple_repeat 1 25 0 24 0 0 0 chr10 124477443 124477467 -21111821 + AT_rich Low_complexity Low_complexity 1 24 0 1999 86 35 51 chr10 124477478 124477513 -21111775 - AluSg SINE Alu -1 309 275 207 0 0 0 chr10 124477513 124477536 -21111752 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1999 86 35 51 chr10 124477536 124477814 -21111474 - AluSg SINE Alu -35 275 1 6069 192 52 38 chr10 124477816 124478896 -21110392 - L1MC1 LINE L1 -9 6324 5261 1051 173 0 0 chr10 124478896 124479069 -21110219 - FAM SINE Alu -1 174 2 6069 192 52 38 chr10 124479069 124479195 -21110093 - L1MC1 LINE L1 -1072 5261 5138 2330 103 3 0 chr10 124479195 124479505 -21109783 - AluSq SINE Alu -2 311 1 6069 192 52 38 chr10 124479505 124481206 -21108082 - L1MC1 LINE L1 -1195 5138 3379 1939 104 54 4 chr10 124482471 124482750 -21106538 - AluSx SINE Alu -19 293 1 31 58 0 0 chr10 124482956 124483008 -21106280 + AT_rich Low_complexity Low_complexity 1 52 0 2082 122 50 11 chr10 124483208 124483568 -21105720 + THE1C LTR MaLR 2 375 0 631 235 80 12 chr10 124483919 124484081 -21105207 - MER96 DNA MER1_type -2 173 1 659 130 0 17 chr10 124484804 124484919 -21104369 - L1PA8 LINE L1 0 6172 6060 2133 72 47 0 chr10 124486368 124486646 -21102642 - AluSx SINE Alu -21 291 1 3972 142 52 19 chr10 124486667 124486821 -21102467 - L1MB7 LINE L1 0 6184 6036 2402 81 0 3 chr10 124486821 124487119 -21102169 + AluSc SINE Alu 1 297 -12 3972 142 52 19 chr10 124487119 124487740 -21101548 - L1MB7 LINE L1 -148 6036 5384 222 265 0 0 chr10 124488786 124488835 -21100453 - L2 LINE L2 -5 3267 3219 1963 126 9 25 chr10 124488909 124489226 -21100062 - AluSx SINE Alu 0 312 1 2271 110 0 0 chr10 124489443 124489744 -21099544 + AluSg SINE Alu 1 301 -9 286 289 10 0 chr10 124490416 124490520 -21098768 + HAL1 LINE L1 2041 2145 -362 548 125 21 10 chr10 124490521 124490617 -21098671 + MER4A LTR ERV1 2 98 -566 1494 128 157 104 chr10 124490617 124491000 -21098288 + MER4A LTR ERV1 261 663 -1 241 257 0 110 chr10 124491696 124491805 -21097483 + L2 LINE L2 2876 2972 -342 822 255 119 20 chr10 124491806 124492190 -21097098 + MLT1J LTR MaLR 3 484 -27 842 281 85 9 chr10 124492196 124492527 -21096761 + L2 LINE L2 2956 3311 -2 417 259 58 58 chr10 124492555 124492779 -21096509 + HAL1 LINE L1 2272 2495 -12 2004 148 0 3 chr10 124492809 124493112 -21096176 + AluSx SINE Alu 1 302 -10 414 322 109 13 chr10 124493431 124493661 -21095627 - L2 LINE L2 -513 2801 2550 391 292 35 18 chr10 124493714 124493827 -21095461 + L2 LINE L2 3145 3259 -13 408 301 170 48 chr10 124493916 124494126 -21095162 - L2 LINE L2 -925 2389 2206 2243 129 0 3 chr10 124494126 124494437 -21094851 + AluSx SINE Alu 1 310 -2 408 301 170 48 chr10 124494437 124494668 -21094620 - L2 LINE L2 -1108 2206 1894 342 0 0 0 chr10 124495049 124495087 -21094201 + (CA)n Simple_repeat Simple_repeat 2 39 0 1896 127 45 0 chr10 124495430 124495698 -21093590 - AluSx SINE Alu -32 280 1 1238 187 17 119 chr10 124496463 124496865 -21092423 - MLT1A1 LTR MaLR -4 361 1 28 61 0 0 chr10 124496934 124496983 -21092305 + AT_rich Low_complexity Low_complexity 1 49 0 16799 103 13 1 chr10 124497003 124500475 -21088813 - L1PA8A LINE L1 -29 6417 2913 2278 114 3 0 chr10 124500473 124500806 -21088482 - L1PA8A LINE L1 -5540 335 2 * 384 312 110 23 chr10 124500882 124501055 -21088233 + MIR3 SINE MIR 16 203 -5 1729 112 4 0 chr10 124501285 124501517 -21087771 + AluSg/x SINE Alu 73 305 -5 2165 97 21 3 chr10 124502674 124502964 -21086324 - AluSq SINE Alu -17 296 2 350 242 0 17 chr10 124503530 124503650 -21085638 + GA-rich Low_complexity Low_complexity 2 119 0 240 246 137 58 chr10 124503861 124503980 -21085308 + MER5B DNA MER1_type 7 124 -54 258 105 0 0 chr10 124504141 124504179 -21085109 + (A)n Simple_repeat Simple_repeat 1 38 0 2059 91 0 0 chr10 124504464 124504716 -21084572 - AluSc SINE Alu -57 252 1 2099 133 3 0 chr10 124504718 124505012 -21084276 - AluSx SINE Alu -17 295 1 1871 169 0 22 chr10 124505328 124505647 -21083641 - AluJo SINE Alu 0 312 1 256 326 84 23 chr10 124505961 124506220 -21083068 - L2 LINE L2 -277 2995 2715 1996 165 7 0 chr10 124506278 124506587 -21082701 + AluSx SINE Alu 1 311 -1 1897 164 3 31 chr10 124509046 124509363 -21079925 + AluJo SINE Alu 1 308 -4 480 299 48 29 chr10 124509951 124510137 -21079151 + MIR3 SINE MIR 12 202 -6 2256 113 17 0 chr10 124510917 124511219 -21078069 + AluSg1 SINE Alu 1 307 -2 222 319 87 0 chr10 124511274 124511343 -21077945 - MIR3 SINE MIR -49 159 85 1173 162 30 21 chr10 124511447 124511722 -21077566 + L1MA7 LINE L1 6007 6287 -13 2256 112 0 3 chr10 124511836 124512131 -21077157 + AluSq SINE Alu 1 294 -19 393 269 57 46 chr10 124512490 124512665 -21076623 + MER5B DNA MER1_type 2 178 0 192 97 0 0 chr10 124513607 124513638 -21075650 + (CCAA)n Simple_repeat Simple_repeat 2 32 0 293 153 0 17 chr10 124515145 124515204 -21074084 + CT-rich Low_complexity Low_complexity 3 60 0 1953 157 26 0 chr10 124515204 124515509 -21073779 - AluSq SINE Alu 0 313 1 307 289 66 41 chr10 124515642 124515696 -21073592 + L2 LINE L2 3187 3238 -75 1815 82 0 0 chr10 124515696 124515929 -21073359 - AluSc SINE Alu -6 303 71 307 289 66 41 chr10 124515929 124515995 -21073293 + L2 LINE L2 3238 3310 -3 510 304 131 11 chr10 124518242 124518433 -21070855 + MIR SINE MIR 49 262 0 192 406 0 0 chr10 124518511 124518575 -21070713 + L2 LINE L2 2990 3053 -219 252 284 11 34 chr10 124518791 124518879 -21070409 - MIR SINE MIR -65 143 58 365 224 172 37 chr10 124518950 124519084 -21070204 + MIR SINE MIR 98 249 -13 1675 152 83 0 chr10 124519110 124519374 -21069914 - AluSx SINE Alu -26 286 1 21 0 0 0 chr10 124519721 124519742 -21069546 + AT_rich Low_complexity Low_complexity 1 21 0 2802 130 39 43 chr10 124521460 124521566 -21067722 - L1MB7 LINE L1 -25 6159 6054 2267 106 0 0 chr10 124521566 124521859 -21067429 - AluSg SINE Alu -17 293 1 2802 130 39 43 chr10 124521859 124522092 -21067196 - L1MB7 LINE L1 -130 6054 5820 1894 171 0 7 chr10 124522092 124522401 -21066887 - AluSx SINE Alu -5 307 1 2802 130 39 43 chr10 124522401 124522567 -21066721 - L1MB7 LINE L1 -364 5820 5655 195 292 125 10 chr10 124522604 124522700 -21066588 + L2 LINE L2 3180 3286 -27 525 329 50 9 chr10 124523482 124523625 -21065663 + MIR SINE MIR 28 185 -77 2036 126 3 19 chr10 124523625 124523934 -21065354 - AluSx SINE Alu -8 304 1 525 329 50 9 chr10 124523934 124524012 -21065276 + MIR SINE MIR 185 258 -4 1934 161 6 19 chr10 124524791 124525107 -21064181 + AluJb SINE Alu 1 312 0 203 167 0 0 chr10 124525200 124525242 -21064046 + G-rich Low_complexity Low_complexity 6 47 0 375 278 0 11 chr10 124525303 124525393 -21063895 - L2 LINE L2 0 3272 3184 1003 237 10 0 chr10 124525432 124525639 -21063649 + MER3 DNA MER1_type 1 209 0 387 0 0 0 chr10 124526808 124526851 -21062437 + (TA)n Simple_repeat Simple_repeat 1 43 0 336 248 14 71 chr10 124527456 124527597 -21061691 + MER5A DNA MER1_type 1 133 -56 196 222 0 32 chr10 124527745 124527808 -21061480 + MIR3 SINE MIR 12 72 -136 2192 107 0 10 chr10 124528097 124528395 -21060893 + AluSx SINE Alu 1 295 -17 2049 135 7 0 chr10 124528914 124529211 -21060077 - AluSp SINE Alu -14 299 1 322 264 33 33 chr10 124529213 124529334 -21059954 - L1ME LINE L1 -391 5730 5610 2121 158 65 20 chr10 124529334 124529734 -21059554 - MSTA LTR MaLR -10 418 1 267 328 0 29 chr10 124530350 124530521 -21058767 + G-rich Low_complexity Low_complexity 3 168 0 2173 112 0 3 chr10 124532363 124532659 -21056629 - AluSg SINE Alu -15 295 1 325 343 77 77 chr10 124532728 124533017 -21056271 + L2 LINE L2 2973 3264 -8 2433 48 41 0 chr10 124533017 124533311 -21055977 + AluY SINE Alu 1 306 -5 201 229 42 0 chr10 124533329 124533377 -21055911 + MIR SINE MIR 65 114 -94 192 240 20 20 chr10 124533497 124533547 -21055741 - L3 LINE CR1 -5 1572 1523 327 219 27 0 chr10 124533750 124533823 -21055465 - MIR SINE MIR -60 148 74 993 173 0 0 chr10 124533951 124534107 -21055181 - AluJo SINE Alu -20 292 137 187 289 70 44 chr10 124534109 124534223 -21055065 - MIR SINE MIR -60 202 86 559 215 70 25 chr10 124534237 124534395 -21054893 - MIR SINE MIR 0 262 98 207 69 0 0 chr10 124538494 124538523 -21050765 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 195 290 16 16 chr10 124538575 124538637 -21050651 + L2 LINE L2 3210 3271 -1 490 260 52 7 chr10 124538699 124538853 -21050435 - MER103 DNA DNA -3 163 3 294 323 144 23 chr10 124538939 124539196 -21050092 + L2 LINE L2 2624 2911 -403 229 326 110 62 chr10 124539198 124539425 -21049863 + L2 LINE L2 3020 3257 -15 277 320 55 108 chr10 124539475 124539837 -21049451 + L2 LINE L2 2930 3272 0 2416 88 0 10 chr10 124540252 124540559 -21048729 - AluSg SINE Alu -6 304 1 2109 188 72 38 chr10 124543855 124544302 -21044986 + MLT1C LTR MaLR 1 462 -5 221 128 21 0 chr10 124546177 124546224 -21043064 + A-rich Low_complexity Low_complexity 3 50 0 318 230 159 9 chr10 124546244 124546357 -21042931 - L1ME4a LINE L1 -3 6118 5989 6554 216 60 67 chr10 124546446 124547551 -21041737 + L1ME1 LINE L1 404 1515 -4700 2097 107 7 0 chr10 124547551 124547856 -21041432 + AluSx SINE Alu 1 307 0 6554 216 60 67 chr10 124547856 124550128 -21039160 + L1ME1 LINE L1 1515 3725 -2490 5001 200 46 9 chr10 124550180 124551456 -21037832 + L1ME1 LINE L1 4215 5542 -701 758 142 108 0 chr10 124551457 124551577 -21037711 - AluJo SINE Alu -169 133 1 525 332 17 0 chr10 124551580 124551812 -21037476 + L1PB1 LINE L1 5645 5880 -271 * 1919 200 37 43 chr10 124551611 124552101 -21037187 + L1ME2 LINE L1 5678 6164 0 1383 242 67 31 chr10 124552118 124552539 -21036749 + L1ME1 LINE L1 5661 6096 -139 2052 106 4 0 chr10 124552563 124552827 -21036461 - AluSq SINE Alu -48 265 1 2846 145 33 33 chr10 124552874 124553364 -21035924 + Tigger1 DNA MER2_type 2 491 -1927 * 8547 117 14 9 chr10 124553360 124554624 -21034664 + Tigger1 DNA MER2_type 1148 2418 0 242 200 0 89 chr10 124554634 124554724 -21034564 + L1MA10 LINE L1 6250 6331 -3 2147 89 20 14 chr10 124554743 124555036 -21034252 + AluSg1 SINE Alu 7 301 -8 196 400 0 0 chr10 124555036 124555111 -21034177 + L2 LINE L2 2690 2767 -547 223 312 78 58 chr10 124555227 124555381 -21033907 + L2 LINE L2 2934 3090 -182 1885 106 20 0 chr10 124555473 124555727 -21033561 - AluSx SINE Alu -14 298 40 201 315 46 37 chr10 124555742 124555850 -21033438 + L2 LINE L2 3160 3268 -4 1600 154 40 7 chr10 124556245 124556539 -21032749 + AluSx SINE Alu 1 303 0 2151 73 0 45 chr10 124557167 124557454 -21031834 + AluSg SINE Alu 2 275 -35 233 266 13 13 chr10 124557794 124557842 -21031446 + (TA)n Simple_repeat Simple_repeat 2 52 -28 2069 138 10 0 chr10 124557842 124558133 -21031155 + AluSx SINE Alu 1 294 -18 233 266 13 13 chr10 124558133 124558163 -21031125 + (TA)n Simple_repeat Simple_repeat 51 80 0 196 233 17 50 chr10 124558973 124559033 -21030255 - MIR SINE MIR -63 145 88 282 146 158 73 chr10 124559195 124559238 -21030050 + MIR3 SINE MIR 119 157 -51 486 307 101 13 chr10 124559238 124559476 -21029812 + MIR SINE MIR 2 260 -2 282 146 158 73 chr10 124559476 124559514 -21029774 + MIR3 SINE MIR 157 207 -1 230 229 98 0 chr10 124559518 124559579 -21029709 - MIR SINE MIR 0 262 196 294 264 165 8 chr10 124559688 124559809 -21029479 - MIR SINE MIR -115 147 8 935 258 208 12 chr10 124660164 124660644 -20928644 + MLT2F LTR ERVL 1 574 -89 306 269 210 19 chr10 124660762 124661033 -20928255 + L2 LINE L2 2988 3310 -3 2405 96 0 0 chr10 124661051 124661353 -20927935 + AluSg SINE Alu 1 302 -8 1289 175 156 4 chr10 124661785 124662042 -20927246 + AluJb SINE Alu 1 296 -6 184 250 0 0 chr10 124662403 124662455 -20926833 - L2 LINE L2 0 3313 3262 204 327 100 27 chr10 124662965 124663075 -20926213 + MIR SINE MIR 32 149 -113 287 177 0 167 chr10 124663084 124663180 -20926108 + MLT1G1 LTR MaLR 7 86 -509 786 173 98 6 chr10 124663280 124663453 -20925835 + MER53 DNA DNA 1 189 0 232 191 0 0 chr10 124663538 124663580 -20925708 + MLT1G LTR MaLR 340 381 -209 1068 179 11 5 chr10 124663587 124663771 -20925517 - MLT1D LTR MaLR -285 220 36 1097 264 76 26 chr10 124663904 124664325 -20924963 + MLT1J2 LTR MaLR 1 442 -8 470 271 0 0 chr10 124664719 124664826 -20924462 + MER81 DNA DNA 1 107 -7 2321 104 3 0 chr10 124665670 124665967 -20923321 - AluSx SINE Alu -12 300 3 1234 238 48 25 chr10 124665976 124665991 -20923297 + MER113 DNA MER1_type? 72 85 -436 705 186 0 0 chr10 124665991 124666120 -20923168 - FLAM_A SINE Alu -4 129 1 1234 238 48 25 chr10 124666120 124666504 -20922784 + MER113 DNA MER1_type? 85 480 -41 21 0 0 0 chr10 124666681 124666702 -20922586 + AT_rich Low_complexity Low_complexity 1 21 0 1278 138 0 6 chr10 124666705 124666886 -20922402 + AluSx SINE Alu 1 180 -132 1137 312 172 26 chr10 124666957 124667761 -20921527 - L2 LINE L2 -687 2627 1641 1600 105 0 5 chr10 124667761 124667971 -20921317 + AluSc SINE Alu 91 299 -10 1137 312 172 26 chr10 124667971 124668191 -20921097 - L2 LINE L2 -1673 1641 1454 1258 141 10 0 chr10 124668210 124668409 -20920879 - AluSg/x SINE Alu -5 305 105 27 29 0 0 chr10 124668537 124668571 -20920717 + AT_rich Low_complexity Low_complexity 1 34 0 2508 63 0 13 chr10 124668582 124668884 -20920404 + AluY SINE Alu 1 298 -13 23 33 0 0 chr10 124669952 124669982 -20919306 + AT_rich Low_complexity Low_complexity 1 30 0 1156 260 93 25 chr10 124670164 124670529 -20918759 - MLT1I LTR MaLR 0 409 20 671 249 146 10 chr10 124670591 124670796 -20918492 + MIR SINE MIR 6 238 -24 289 310 11 0 chr10 124671077 124671164 -20918124 + L2 LINE L2 3185 3272 0 2192 92 3 7 chr10 124671511 124671804 -20917484 + AluSg SINE Alu 1 292 -18 483 284 109 54 chr10 124671828 124672191 -20917097 - L2 LINE L2 -189 3083 2583 899 180 104 0 chr10 124672772 124672955 -20916333 - L2 LINE L2 -694 2620 2419 904 277 96 19 chr10 124673154 124673569 -20915719 - L1M4 LINE L1 -1784 4362 3916 701 195 105 14 chr10 124673590 124673800 -20915488 - MER20B DNA MER1_type -5 778 550 808 270 137 0 chr10 124674016 124674286 -20915002 - L2 LINE L2 -1 3312 3006 341 276 71 16 chr10 124674362 124674489 -20914799 - MIR SINE MIR -15 247 114 6648 25 0 0 chr10 124674717 124675441 -20913847 + L1PA3 LINE L1 5432 6155 0 2245 77 20 14 chr10 124678541 124678838 -20910450 + AluY SINE Alu 1 299 -12 21 71 0 0 chr10 124679595 124679637 -20909651 + AT_rich Low_complexity Low_complexity 1 42 0 193 324 72 36 chr10 124679919 124680030 -20909258 + L2 LINE L2 3189 3303 -10 23 33 0 0 chr10 124680973 124681003 -20908285 + AT_rich Low_complexity Low_complexity 1 30 0 2132 108 0 10 chr10 124682036 124682332 -20906956 - AluSx SINE Alu -15 297 5 200 240 100 0 chr10 124683960 124684010 -20905278 + MIR SINE MIR 7 61 -201 241 211 100 56 chr10 124684484 124684574 -20904714 - MIR SINE MIR -46 216 123 679 191 39 88 chr10 124684836 124685040 -20904248 - MIR SINE MIR -11 251 58 2083 117 13 23 chr10 124685676 124685984 -20903304 - AluSx SINE Alu -7 305 1 1832 119 48 4 chr10 124685997 124686300 -20902988 - AluSq SINE Alu 0 316 2 1735 142 39 39 chr10 124687454 124687763 -20901525 - AluJo SINE Alu -3 309 1 22 0 0 0 chr10 124689144 124689166 -20900122 + AT_rich Low_complexity Low_complexity 1 22 0 503 298 98 13 chr10 124689227 124689724 -20899564 + L1MC/D LINE L1 4884 5423 -784 383 233 194 16 chr10 124689725 124689854 -20899434 - L2 LINE L2 -3 3310 3159 499 238 94 17 chr10 124689976 124690157 -20899131 - L1ME LINE L1 -586 5578 5384 539 242 154 6 chr10 124690158 124690340 -20898948 + L1MC/D LINE L1 5616 5824 -1984 2776 176 107 14 chr10 124690444 124691391 -20897897 - Tigger6a DNA MER2_type -7 1076 1 834 161 16 0 chr10 124691631 124691755 -20897533 + FLAM_C SINE Alu 2 127 -16 236 259 296 5 chr10 124691941 124692130 -20897158 + MIR SINE MIR 1 244 -18 196 357 114 7 chr10 124692146 124692286 -20897002 + L3 LINE CR1 1417 1571 -6 298 316 152 6 chr10 124694258 124694416 -20894872 - L3b LINE CR1 -102 1481 1301 2987 230 55 0 chr10 124694649 124695287 -20894001 + L1M4 LINE L1 13 685 -6174 1216 193 123 21 chr10 124695288 124695713 -20893575 + L1M4 LINE L1 4101 4585 -2372 2090 124 0 7 chr10 124695733 124696031 -20893257 + AluSx SINE Alu 3 298 -14 1207 218 166 120 chr10 124696099 124696806 -20892482 + MER21B LTR ERV1 1 739 -124 1385 186 29 35 chr10 124696812 124697123 -20892165 + L1M4 LINE L1 4602 4910 -2047 1090 215 21 4 chr10 124697119 124697352 -20891936 + L1M4 LINE L1 5428 5664 -1293 * 1373 205 105 10 chr10 124697345 124697736 -20891552 - L1M4 LINE L1 -1514 4632 4205 1918 106 7 15 chr10 124697740 124698013 -20891275 - AluSx SINE Alu 0 312 42 227 303 77 52 chr10 124698592 124698688 -20890600 - MIR3 SINE MIR -31 177 74 1910 190 55 6 chr10 124698688 124699036 -20890252 + MLT1A1 LTR MaLR 1 365 0 227 303 77 52 chr10 124699036 124699094 -20890194 - MIR3 SINE MIR -134 74 19 552 304 26 5 chr10 124699469 124699663 -20889625 - MIR SINE MIR -36 226 29 2400 89 0 3 chr10 124700056 124700360 -20888928 - AluSg SINE Alu -7 303 1 689 319 51 22 chr10 124702748 124703024 -20886264 + L3 LINE CR1 1293 1576 -1 263 253 0 38 chr10 124703046 124703125 -20886163 + MIR3 SINE MIR 109 184 -24 2047 123 0 30 chr10 124704206 124704508 -20884780 + AluSx SINE Alu 4 296 -16 543 56 0 0 chr10 124704816 124704887 -20884401 + (TGGA)n Simple_repeat Simple_repeat 1 71 0 293 203 58 0 chr10 124705067 124705136 -20884152 + MIR3 SINE MIR 111 183 -25 2075 150 0 6 chr10 124705404 124705740 -20883548 - AluSx SINE Alu 0 334 1 747 193 19 61 chr10 124706322 124706416 -20882872 + MLT1C LTR MaLR 90 186 -281 2074 68 0 11 chr10 124706416 124706679 -20882609 + AluY SINE Alu 40 299 -12 747 193 19 61 chr10 124706679 124706796 -20882492 + MLT1C LTR MaLR 186 292 -175 1815 216 43 35 chr10 124706906 124707198 -20882090 - MLT1C LTR MaLR 0 467 168 2116 134 3 0 chr10 124707198 124707497 -20881791 - AluSx SINE Alu -12 300 1 1815 216 43 35 chr10 124707497 124707667 -20881621 - MLT1C LTR MaLR -299 168 1 447 287 2 47 chr10 124707681 124707862 -20881426 + MIR SINE MIR 21 192 -40 1399 233 69 61 chr10 124707961 124708058 -20881230 + MLT1F1 LTR MaLR 1 96 -471 1801 131 67 11 chr10 124708058 124708341 -20880947 - AluSx SINE Alu -13 299 1 1399 233 69 61 chr10 124708341 124708806 -20880482 + MLT1F1 LTR MaLR 96 567 0 281 319 125 19 chr10 124709200 124709360 -20879928 + L2 LINE L2 2885 3061 -211 2126 215 23 14 chr10 124709361 124709793 -20879495 - MER63B DNA MER1_type 0 436 1 187 221 29 118 chr10 124709903 124709971 -20879317 + L2 LINE L2 3125 3186 -86 21 0 0 0 chr10 124710583 124710604 -20878684 + AT_rich Low_complexity Low_complexity 1 21 0 1374 167 75 18 chr10 124710933 124711215 -20878073 - AluJo SINE Alu -14 298 1 885 164 0 0 chr10 124711876 124712016 -20877272 + FRAM SINE Alu 24 163 -13 610 268 10 58 chr10 124712897 124713102 -20876186 - MIR3 SINE MIR -3 205 11 2685 104 22 0 chr10 124713896 124714252 -20875036 + THE1B LTR MaLR 1 364 0 473 31 112 9 chr10 124714411 124714644 -20874644 + (TA)n Simple_repeat Simple_repeat 1 256 0 3342 60 0 0 chr10 124714656 124715059 -20874229 - MLT2A1 LTR ERVL -41 403 1 2234 120 13 0 chr10 124715269 124715577 -20873711 + AluSq SINE Alu 1 312 -1 640 289 30 8 chr10 124716390 124716625 -20872663 - LTR16A1 LTR ERVL -2 455 216 221 223 117 53 chr10 124716872 124716966 -20872322 - MIR SINE MIR -114 148 49 659 212 143 44 chr10 124717835 124718038 -20871250 + MIR SINE MIR 27 249 -13 2194 136 0 0 chr10 124718043 124718351 -20870937 + AluSq SINE Alu 2 309 -4 819 250 112 15 chr10 124718447 124718715 -20870573 + L2 LINE L2 3019 3312 -1 304 273 0 11 chr10 124719028 124719116 -20870172 + MER33 DNA MER1_type 2 88 -236 249 108 0 0 chr10 124719901 124719938 -20869350 + (TC)n Simple_repeat Simple_repeat 2 38 0 1345 164 54 39 chr10 124720078 124720358 -20868930 + MER33 DNA MER1_type 1 284 -40 843 168 0 0 chr10 124720359 124720490 -20868798 + FLAM_C SINE Alu 1 131 -12 369 62 0 0 chr10 124720490 124720538 -20868750 + (TA)n Simple_repeat Simple_repeat 1 48 0 251 150 0 17 chr10 124720538 124720598 -20868690 - L1MCa LINE L1 -4362 2064 2006 * 325 214 0 24 chr10 124720549 124720633 -20868655 + L1MC4 LINE L1 6614 6695 -1347 201 74 0 0 chr10 124720644 124720671 -20868617 + (TA)n Simple_repeat Simple_repeat 2 28 0 1229 149 0 0 chr10 124720671 124720852 -20868436 + AluSg/x SINE Alu 125 305 -7 272 188 21 0 chr10 124720852 124720900 -20868388 + MER33 DNA MER1_type 315 363 0 365 233 233 8 chr10 124721405 124721538 -20867750 + MIR3 SINE MIR 34 196 -12 486 229 44 97 chr10 124721818 124722045 -20867243 + L1ME4a LINE L1 5572 5786 -335 883 140 30 2 chr10 124722079 124722518 -20866770 + (TAGA)n Simple_repeat Simple_repeat 1 451 0 374 221 55 35 chr10 124722628 124722773 -20866515 + L1ME4a LINE L1 5971 6118 -3 2245 109 0 3 chr10 124722780 124723074 -20866214 - AluSx SINE Alu -19 293 1 2015 145 0 0 chr10 124723324 124723621 -20865667 - AluSx SINE Alu -15 297 1 1705 173 79 22 chr10 124723709 124724078 -20865210 - MLT1B LTR MaLR 0 390 1 260 198 0 139 chr10 124724135 124724221 -20865067 - LTR16C LTR ERVL -264 227 154 195 42 0 0 chr10 124724469 124724493 -20864795 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1709 142 98 33 chr10 124725560 124725897 -20863391 + MLT1A2 LTR MaLR 15 373 -1 1194 198 18 110 chr10 124727169 124727569 -20861719 - MLT1A1 LTR MaLR -2 363 1 489 214 10 0 chr10 124727835 124727933 -20861355 - FRAM SINE Alu -68 108 10 310 143 0 0 chr10 124728039 124728081 -20861207 + AluJ/FLAM SINE Alu 24 65 -237 2149 127 42 22 chr10 124728231 124728586 -20860702 + THE1B LTR MaLR 1 362 -2 1005 155 0 35 chr10 124728598 124728772 -20860516 - AluJb SINE Alu -16 296 129 273 128 43 0 chr10 124729149 124729196 -20860092 - L1MB2 LINE L1 -8 6163 6115 1006 187 122 0 chr10 124729246 124729460 -20859828 - L1MB2 LINE L1 -40 6131 5892 754 138 0 9 chr10 124729820 124729929 -20859359 - FLAM_A SINE Alu -25 117 10 679 237 140 18 chr10 124730341 124730619 -20858669 - LTR16A1 LTR ERVL 0 457 146 275 372 13 0 chr10 124733034 124733190 -20856098 + (CA)n Simple_repeat Simple_repeat 2 159 0 342 61 0 0 chr10 124733252 124733301 -20855987 + (CA)n Simple_repeat Simple_repeat 1 49 0 202 362 32 32 chr10 124733793 124733887 -20855401 + MIR SINE MIR 30 123 -85 1369 155 65 35 chr10 124734487 124734751 -20854537 + AluJo SINE Alu 1 255 -57 243 0 0 0 chr10 124734751 124734778 -20854510 + (TC)n Simple_repeat Simple_repeat 2 28 0 243 61 0 0 chr10 124734777 124734810 -20854478 + (TA)n Simple_repeat Simple_repeat 1 33 0 1369 155 65 35 chr10 124734778 124734835 -20854453 + AluJo SINE Alu 255 299 -13 2297 172 25 67 chr10 124735031 124735555 -20853733 - MLT1D LTR MaLR -3 502 1 180 111 0 0 chr10 124735690 124735717 -20853571 + (A)n Simple_repeat Simple_repeat 1 27 0 262 279 28 78 chr10 124736915 124737237 -20852051 + HAL1 LINE L1 2197 2502 -5 325 242 41 113 chr10 124737386 124737580 -20851708 - L1MC4 LINE L1 -1 8041 7772 3888 151 31 19 chr10 124737589 124738309 -20850979 - L1MB2 LINE L1 -16 6155 5428 491 249 61 24 chr10 124739440 124739618 -20849670 - MIR SINE MIR -20 242 57 1994 112 44 7 chr10 124739642 124739938 -20849350 - AluSx SINE Alu -5 307 1 207 299 75 93 chr10 124739962 124740176 -20849112 + L2 LINE L2 3063 3272 0 228 303 44 57 chr10 124740265 124740429 -20848859 + MIR3 SINE MIR 42 180 -28 8557 69 7 4 chr10 124740855 124741923 -20847365 - MER11C LTR ERVK 0 1071 1 712 266 16 27 chr10 124742299 124742487 -20846801 - LTR33 LTR ERVL 0 521 336 249 307 26 35 chr10 124742497 124742611 -20846677 + LTR16B LTR ERVL 352 464 0 277 351 11 0 chr10 124742623 124742717 -20846571 + MIR3 SINE MIR 90 184 -24 248 175 16 0 chr10 124743534 124743597 -20845691 + CT-rich Low_complexity Low_complexity 1 64 0 1476 152 69 35 chr10 124743882 124744171 -20845117 + AluJb SINE Alu 6 304 -8 345 280 13 102 chr10 124744421 124744578 -20844710 + MARNA DNA Mariner 46 188 -398 2159 221 68 8 chr10 124744879 124745368 -20843920 + LTR40a LTR ERVL 2 519 0 1042 246 124 48 chr10 124745485 124745919 -20843369 - MLT1C LTR MaLR 0 467 1 480 332 16 40 chr10 124745926 124746179 -20843109 + L1MEd LINE L1 509 755 -5364 2174 86 0 3 chr10 124746569 124746859 -20842429 - AluY SINE Alu -22 289 1 1987 133 3 0 chr10 124747253 124747547 -20841741 - AluSx SINE Alu -17 295 1 21 0 0 0 chr10 124747550 124747571 -20841717 + AT_rich Low_complexity Low_complexity 1 21 0 210 71 0 0 chr10 124747686 124747714 -20841574 + (GA)n Simple_repeat Simple_repeat 1 28 0 242 56 28 0 chr10 124747716 124747752 -20841536 + (TG)n Simple_repeat Simple_repeat 2 38 0 399 354 6 23 chr10 124747944 124748119 -20841169 - MLT1K LTR MaLR -288 300 129 470 139 26 9 chr10 124748476 124748591 -20840697 + CT-rich Low_complexity Low_complexity 2 118 0 334 303 67 42 chr10 124748856 124748975 -20840313 - L2 LINE L2 -47 3225 3104 359 279 79 118 chr10 124752594 124753060 -20836228 + L2 LINE L2 2824 3271 -1 407 202 73 37 chr10 124753904 124754013 -20835275 + MIR3 SINE MIR 49 161 -47 361 295 55 38 chr10 124754072 124754255 -20835033 + MIR SINE MIR 19 204 -58 615 259 149 0 chr10 124754294 124754468 -20834820 + MIR SINE MIR 6 205 -57 318 285 41 41 chr10 124755098 124755221 -20834067 + MIR3 SINE MIR 3 125 -83 422 274 83 49 chr10 124755224 124755428 -20833860 - MLT1K LTR MaLR -164 424 214 225 291 23 12 chr10 124755827 124755913 -20833375 + LTR67 LTR ERVL 431 517 -40 291 148 19 19 chr10 124755944 124755998 -20833290 - MLT1K LTR MaLR -370 218 165 777 260 89 20 chr10 124756401 124756705 -20832583 + LTR16A1 LTR ERVL 126 450 -7 203 100 0 25 chr10 124757746 124757786 -20831502 + (CAGAGA)n Simple_repeat Simple_repeat 4 42 0 874 88 0 15 chr10 124757789 124757925 -20831363 + (GGAA)n Simple_repeat Simple_repeat 4 137 0 639 161 15 22 chr10 124757978 124758115 -20831173 - MER33 DNA MER1_type 0 363 228 506 188 42 83 chr10 124758122 124758314 -20830974 - MER33 DNA MER1_type -99 225 42 298 264 56 0 chr10 124758318 124758390 -20830898 - L2 LINE L2 -49 3264 3189 200 345 79 30 chr10 124758422 124758587 -20830701 + L2 LINE L2 1890 2062 -1252 339 293 130 8 chr10 124758823 124758946 -20830342 - L2 LINE L2 -7 3306 3169 267 327 72 31 chr10 124758958 124759166 -20830122 - L2 LINE L2 -267 3046 2818 2157 123 39 28 chr10 124759166 124759523 -20829765 + THE1B LTR MaLR 4 364 0 267 327 72 31 chr10 124759523 124759570 -20829718 - L2 LINE L2 -495 2818 2774 432 273 58 13 chr10 124760413 124760567 -20828721 + MIR SINE MIR 91 251 -11 351 154 0 0 chr10 124760571 124760636 -20828652 + (ATG)n Simple_repeat Simple_repeat 3 67 0 253 297 101 50 chr10 124761389 124761833 -20827455 - HAL1b LINE L1 -568 780 314 398 279 39 23 chr10 124762038 124762167 -20827121 + MIR SINE MIR 62 192 -70 482 262 184 0 chr10 124762575 124762716 -20826572 + MER5A DNA MER1_type 17 183 -6 339 343 0 0 chr10 124763453 124763552 -20825736 + L2 LINE L2 3201 3299 -14 860 195 0 30 chr10 124763838 124764002 -20825286 + FRAM SINE Alu 5 163 -3 351 0 0 0 chr10 124764955 124764994 -20824294 + (A)n Simple_repeat Simple_repeat 1 39 0 219 139 0 0 chr10 124765302 124765338 -20823950 + (A)n Simple_repeat Simple_repeat 1 36 0 273 176 191 0 chr10 124766984 124767052 -20822236 - MER63 DNA MER1_type -3 1058 978 328 250 0 0 chr10 124767066 124767134 -20822154 - MER63 DNA MER1_type -90 746 679 577 240 69 64 chr10 124767603 124767807 -20821481 + L2 LINE L2 2140 2344 -970 775 254 246 8 chr10 124767807 124768292 -20820996 + L2 LINE L2 2713 3313 0 836 320 109 11 chr10 124768311 124768789 -20820499 + L2 LINE L2 2373 2897 -417 658 248 23 56 chr10 124768779 124768993 -20820295 - L2 LINE L2 -1 3312 3106 * 1016 254 208 12 chr10 124769133 124769613 -20819675 + MLT2F LTR ERVL 1 574 -89 422 272 206 18 chr10 124769731 124770003 -20819285 + L2 LINE L2 2988 3310 -3 2219 100 3 0 chr10 124770021 124770322 -20818966 + AluSg SINE Alu 1 302 -8 1302 175 156 4 chr10 124770754 124771011 -20818277 + AluJb SINE Alu 1 296 -6 215 250 0 0 chr10 124771372 124771424 -20817864 - L2 LINE L2 0 3313 3262 248 336 95 26 chr10 124771930 124772046 -20817242 + MIR SINE MIR 26 149 -113 287 177 0 167 chr10 124772055 124772151 -20817137 + MLT1G1 LTR MaLR 7 86 -509 771 173 98 6 chr10 124772251 124772424 -20816864 + MER53 DNA DNA 1 189 0 235 191 0 0 chr10 124772509 124772551 -20816737 + MLT1G LTR MaLR 340 381 -209 1085 174 11 5 chr10 124772558 124772742 -20816546 - MLT1D LTR MaLR -285 220 36 1106 271 76 26 chr10 124772875 124773296 -20815992 + MLT1J2 LTR MaLR 1 442 -8 477 271 0 0 chr10 124773690 124773797 -20815491 + MER81 DNA DNA 1 107 -7 2318 107 3 0 chr10 124774641 124774941 -20814347 - AluSx SINE Alu -9 303 3 1267 239 50 20 chr10 124774950 124774965 -20814323 + MER113 DNA MER1_type? 72 85 -436 686 189 0 0 chr10 124774965 124775092 -20814196 - FLAM_A SINE Alu -6 127 1 1267 239 50 20 chr10 124775092 124775473 -20813815 + MER113 DNA MER1_type? 85 480 -41 1287 314 194 28 chr10 124775487 124775674 -20813614 + L2 LINE L2 1205 1360 -1954 2320 113 0 3 chr10 124775674 124775985 -20813303 + AluSx SINE Alu 1 310 -2 1287 314 194 28 chr10 124775985 124776224 -20813064 + L2 LINE L2 1360 1558 -1756 1576 106 0 5 chr10 124776224 124776431 -20812857 - AluSc SINE Alu -13 296 91 1287 314 194 28 chr10 124776431 124777451 -20811837 + L2 LINE L2 1558 2892 -422 205 170 0 57 chr10 124777451 124777504 -20811784 + (TGAA)n Simple_repeat Simple_repeat 3 52 0 2315 88 7 13 chr10 124777831 124778139 -20811149 - AluSq SINE Alu -7 306 1 2923 180 22 24 chr10 124778498 124779086 -20810202 + L1MB8 LINE L1 5590 6176 -2 962 184 0 0 chr10 124779120 124779283 -20810005 - FRAM SINE Alu -13 163 1 774 168 0 0 chr10 124779389 124779508 -20809780 - FLAM_C SINE Alu -20 123 5 1418 219 58 12 chr10 124779687 124780015 -20809273 - MLT1A1 LTR MaLR 0 365 23 24 0 0 0 chr10 124780149 124780173 -20809115 + AT_rich Low_complexity Low_complexity 1 24 0 871 259 154 37 chr10 124781808 124782191 -20807097 - L1ME4a LINE L1 -3 6118 5691 4162 163 31 52 chr10 124782601 124782836 -20806452 - L1MB4 LINE L1 -2 6178 5940 2282 96 3 0 chr10 124782836 124783127 -20806161 + AluSq SINE Alu 1 292 -21 4162 163 31 52 chr10 124783127 124783598 -20805690 - L1MB4 LINE L1 -240 5940 5461 2598 54 0 13 chr10 124783598 124783911 -20805377 - AluY SINE Alu -2 309 1 195 42 0 0 chr10 124783913 124783937 -20805351 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 4162 163 31 52 chr10 124783937 124784068 -20805220 - L1MB4 LINE L1 -720 5460 5354 2298 90 0 3 chr10 124784068 124784380 -20804908 - AluY SINE Alu 0 311 1 4162 163 31 52 chr10 124784380 124784431 -20804857 - L1MB4 LINE L1 -826 5354 5303 1743 182 68 18 chr10 124786000 124786385 -20802903 - L1MC2 LINE L1 0 6344 5941 268 285 41 27 chr10 124786461 124786636 -20802652 - MIR SINE MIR -14 248 4 1144 170 83 0 chr10 124786784 124787002 -20802286 + MER46A DNA MER2_type 1 236 0 5436 161 6 22 chr10 124787065 124788140 -20801148 + L1MB3 LINE L1 5126 6182 -1 395 273 58 54 chr10 124788433 124788617 -20800671 - MIR SINE MIR -23 185 1 245 292 21 21 chr10 124788737 124788833 -20800455 - MIR SINE MIR -93 169 74 513 295 91 5 chr10 124790041 124790251 -20799037 + MIR SINE MIR 25 252 -10 2412 87 0 3 chr10 124790439 124790739 -20798549 + AluY SINE Alu 1 299 -12 287 100 0 0 chr10 124791115 124791155 -20798133 - Alu SINE Alu -6 296 257 718 160 8 0 chr10 124791157 124791276 -20798012 - AluJo/FLAM SINE Alu -189 123 4 408 246 157 0 chr10 124791578 124791712 -20797576 - MER112 DNA MER1_type -98 162 8 201 330 22 22 chr10 124791745 124791836 -20797452 + L2 LINE L2 3177 3267 -5 205 171 0 0 chr10 124791839 124791874 -20797414 + (TGAA)n Simple_repeat Simple_repeat 2 36 0 1691 204 57 46 chr10 124792210 124792487 -20796801 + L1ME1 LINE L1 5722 6007 -159 2180 125 39 33 chr10 124792487 124792848 -20796440 + THE1B LTR MaLR 1 363 -1 1691 204 57 46 chr10 124792848 124793006 -20796282 + L1ME1 LINE L1 6007 6162 -4 231 313 62 18 chr10 124794719 124794831 -20794457 + L2 LINE L2 3156 3272 0 306 73 0 0 chr10 124794835 124794876 -20794412 + (TGGA)n Simple_repeat Simple_repeat 4 44 0 298 342 153 9 chr10 124795587 124795815 -20793473 - MIR SINE MIR -1 261 1 192 125 0 0 chr10 124795919 124795951 -20793337 + (GA)n Simple_repeat Simple_repeat 1 32 0 1168 46 34 6 chr10 124795961 124796136 -20793152 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1176 73 0 13 chr10 124796142 124796371 -20792917 + AluY SINE Alu 157 383 0 2118 112 0 20 chr10 124797761 124798065 -20791223 - AluSg SINE Alu -12 298 1 1276 146 33 5 chr10 124798137 124798350 -20790938 - MER20 DNA MER1_type 0 219 1 330 280 42 42 chr10 124799750 124799893 -20789395 - MIR SINE MIR -70 192 50 841 136 233 34 chr10 124800412 124800474 -20788814 + L1MB5 LINE L1 5715 5763 -411 204 40 0 0 chr10 124800474 124800499 -20788789 + (TG)n Simple_repeat Simple_repeat 2 26 0 841 136 233 34 chr10 124800499 124800642 -20788646 + L1MB5 LINE L1 5763 5961 -213 974 162 68 12 chr10 124800651 124800878 -20788410 - L1MB7 LINE L1 -13 6161 5937 453 286 98 10 chr10 124800926 124801129 -20788159 - L2 LINE L2 -1126 2188 1968 1017 290 36 12 chr10 124801137 124801472 -20787816 - L1MB7 LINE L1 -2206 5602 5260 1647 173 38 42 chr10 124802263 124802576 -20786712 + AluJb SINE Alu 1 312 0 449 363 47 9 chr10 124802946 124803158 -20786130 + MIR SINE MIR 15 234 -28 1200 162 56 112 chr10 124804945 124805266 -20784022 + MLT1B LTR MaLR 1 303 -87 759 270 31 35 chr10 124806330 124806589 -20782699 - MIR SINE MIR -1 261 4 2180 118 10 0 chr10 124806675 124806980 -20782308 + AluSx SINE Alu 1 308 -4 2549 65 0 0 chr10 124808358 124808666 -20780622 - AluY SINE Alu -3 308 1 2483 52 0 52 chr10 124808807 124809132 -20780156 - AluY SINE Alu -3 308 1 226 160 20 20 chr10 124810330 124810380 -20778908 - MIR SINE MIR -54 208 159 229 181 0 28 chr10 124810555 124810627 -20778661 + GA-rich Low_complexity Low_complexity 3 72 0 921 187 33 0 chr10 124811305 124811531 -20777757 - AluJo SINE Alu 0 328 97 26 30 0 0 chr10 124811756 124811789 -20777499 + AT_rich Low_complexity Low_complexity 1 33 0 2234 113 3 0 chr10 124813360 124813662 -20775626 + AluSq SINE Alu 1 303 -10 33 0 0 0 chr10 124814156 124814189 -20775099 + AT_rich Low_complexity Low_complexity 1 33 0 180 0 0 0 chr10 124814348 124814368 -20774920 + (A)n Simple_repeat Simple_repeat 1 20 0 394 236 11 73 chr10 124815234 124815425 -20773863 + G-rich Low_complexity Low_complexity 2 180 0 312 175 0 0 chr10 124815742 124815805 -20773483 + (CGG)n Simple_repeat Simple_repeat 3 65 0 21 0 0 0 chr10 124816488 124816509 -20772779 + GC_rich Low_complexity Low_complexity 1 21 0 254 229 0 0 chr10 124816790 124816851 -20772437 + C-rich Low_complexity Low_complexity 3 63 0 186 43 0 0 chr10 124816851 124816874 -20772414 + (CCG)n Simple_repeat Simple_repeat 2 24 0 351 113 0 0 chr10 124817616 124817669 -20771619 + (T)n Simple_repeat Simple_repeat 1 53 0 24 67 0 0 chr10 124818553 124818598 -20770690 + AT_rich Low_complexity Low_complexity 1 45 0 216 0 0 0 chr10 124819044 124819068 -20770220 + (A)n Simple_repeat Simple_repeat 1 24 0 204 125 0 0 chr10 124819805 124819837 -20769451 + (A)n Simple_repeat Simple_repeat 1 32 0 2530 68 0 0 chr10 124822024 124822331 -20766957 - AluY SINE Alu -3 308 2 1067 142 0 7 chr10 124822349 124822504 -20766784 - AluJb SINE Alu -22 290 137 788 188 0 0 chr10 124822549 124822687 -20766601 - FLAM_C SINE Alu -4 139 2 243 227 91 104 chr10 124824407 124824548 -20764740 - L3b LINE CR1 -178 1405 1267 2007 155 7 0 chr10 124824548 124824852 -20764436 + AluJo SINE Alu 1 306 -6 243 227 91 104 chr10 124824852 124824930 -20764358 - L3b LINE CR1 -316 1267 1189 39 22 0 0 chr10 124825274 124825320 -20763968 + AT_rich Low_complexity Low_complexity 1 46 0 1660 174 0 46 chr10 124825440 124825745 -20763543 - AluJb SINE Alu -19 293 3 743 182 0 0 chr10 124825748 124825880 -20763408 - AluJo/FLAM SINE Alu -169 133 2 507 226 225 19 chr10 124826165 124826405 -20762883 - MER33 DNA MER1_type 0 363 38 2154 134 0 0 chr10 124826893 124827192 -20762096 - AluJb SINE Alu -13 299 1 339 164 0 0 chr10 124830040 124830101 -20759187 + (TA)n Simple_repeat Simple_repeat 2 62 0 1350 161 19 140 chr10 124830129 124830508 -20758780 - MER46C DNA MER2_type -5 333 1 200 263 25 62 chr10 124830860 124830940 -20758348 - L3 LINE CR1 -7 1570 1494 210 176 0 0 chr10 124830970 124831004 -20758284 + A-rich Low_complexity Low_complexity 1 34 0 1669 157 19 28 chr10 124832310 124832634 -20756654 + L1MB5 LINE L1 5854 6174 0 261 291 27 36 chr10 124832891 124833001 -20756287 + MIR SINE MIR 40 148 -114 989 280 47 24 chr10 124833019 124833401 -20755887 - MER110 LTR ERV1 -20 471 81 254 301 81 16 chr10 124833764 124833887 -20755401 + MIR SINE MIR 16 146 -62 22 0 0 0 chr10 124833955 124833977 -20755311 + AT_rich Low_complexity Low_complexity 1 22 0 198 0 0 0 chr10 124834346 124834368 -20754920 + (TTTTTG)n Simple_repeat Simple_repeat 1 22 0 403 308 109 50 chr10 124834786 124835316 -20753972 - L2 LINE L2 -5 3267 2702 203 61 30 0 chr10 124836007 124836040 -20753248 + (TG)n Simple_repeat Simple_repeat 2 35 0 588 262 34 15 chr10 124837018 124837224 -20752064 - MIR SINE MIR -40 222 13 212 258 16 0 chr10 124838813 124838875 -20750413 - L3 LINE CR1 -1 1576 1514 2390 88 0 10 chr10 124839274 124839579 -20749709 - AluSq SINE Alu -11 302 1 1858 147 0 4 chr10 124839579 124839858 -20749430 - AluJb SINE Alu -22 290 13 303 85 0 0 chr10 124841036 124841083 -20748205 + (TTG)n Simple_repeat Simple_repeat 2 48 0 2271 91 3 0 chr10 124841087 124841372 -20747916 - AluSg SINE Alu -24 286 1 236 246 0 18 chr10 124841510 124841567 -20747721 + (TA)n Simple_repeat Simple_repeat 2 57 0 1708 179 7 3 chr10 124841591 124841892 -20747396 - AluJo SINE Alu -10 302 1 25 0 0 0 chr10 124841897 124841922 -20747366 + AT_rich Low_complexity Low_complexity 1 25 0 1972 97 23 0 chr10 124842396 124842654 -20746634 - AluSx SINE Alu -2 310 47 1815 118 12 0 chr10 124844746 124844991 -20744297 + AluSx SINE Alu 21 268 -44 1167 235 15 8 chr10 124845374 124845642 -20743646 - L1ME1 LINE L1 -21 6145 5876 183 129 0 0 chr10 124845642 124845673 -20743615 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 1330 179 12 84 chr10 124845907 124846123 -20743165 - L1ME1 LINE L1 -274 5892 5706 2190 106 0 0 chr10 124846123 124846438 -20742850 - AluSx SINE Alu 0 315 1 1330 179 12 84 chr10 124846438 124846555 -20742733 - L1ME1 LINE L1 -460 5706 5582 501 188 15 1 chr10 124846555 124846816 -20742472 + AluJo SINE Alu 15 311 -1 648 181 181 28 chr10 124846825 124847007 -20742281 - L1ME1 LINE L1 -577 5589 5380 990 178 47 23 chr10 124847086 124847300 -20741988 + MER20 DNA MER1_type 1 219 0 2073 147 0 0 chr10 124847430 124847723 -20741565 - AluSx SINE Alu -19 293 1 220 263 35 88 chr10 124848017 124848131 -20741157 + MIR3 SINE MIR 95 202 -6 2321 111 73 6 chr10 124848770 124849111 -20740177 - THE1B LTR MaLR 0 364 1 357 167 133 22 chr10 124849120 124849210 -20740078 - MER5C DNA MER1_type 0 324 225 324 253 42 11 chr10 124849229 124849324 -20739964 - MER5C DNA MER1_type -200 124 27 279 294 71 16 chr10 124850747 124850873 -20738415 - MIR3 SINE MIR -23 185 53 2324 88 3 25 chr10 124850878 124851230 -20738058 - AluSx SINE Alu 0 345 1 231 268 28 14 chr10 124851630 124851701 -20737587 - MIR3 SINE MIR -2 206 135 472 258 111 101 chr10 124851763 124852259 -20737029 - L3 LINE CR1 -161 1416 916 861 246 91 82 chr10 124852728 124853014 -20736274 - L1MC4a LINE L1 -1215 6593 6300 982 183 0 12 chr10 124853014 124853178 -20736110 + FRAM SINE Alu 1 162 -4 861 246 91 82 chr10 124853178 124853342 -20735946 - L1MC4a LINE L1 -1508 6300 6139 468 242 130 25 chr10 124854626 124855003 -20734285 - MLT1H LTR MaLR 0 654 84 2124 123 3 0 chr10 124855389 124855674 -20733614 + AluSx SINE Alu 1 286 -26 223 81 27 0 chr10 124855675 124855712 -20733576 + (TA)n Simple_repeat Simple_repeat 1 38 0 529 85 28 28 chr10 124855718 124855859 -20733429 + (TATAA)n Simple_repeat Simple_repeat 4 144 0 251 71 24 0 chr10 124855971 124856013 -20733275 + (TATAA)n Simple_repeat Simple_repeat 2 44 0 23 33 0 0 chr10 124856018 124856048 -20733240 + AT_rich Low_complexity Low_complexity 1 30 0 2198 131 27 0 chr10 124856526 124856854 -20732434 - MER1B DNA MER1_type 0 337 1 2120 126 3 0 chr10 124857628 124857922 -20731366 + AluSx SINE Alu 1 295 -17 951 204 80 5 chr10 124859265 124859466 -20729822 - MER20 DNA MER1_type 0 219 4 2330 108 3 0 chr10 124860133 124860438 -20728850 - AluSx SINE Alu -6 306 1 2295 91 0 3 chr10 124860920 124861217 -20728071 + AluY SINE Alu 14 309 -2 1873 164 0 7 chr10 124861366 124861665 -20727623 + AluJo SINE Alu 5 301 -11 2091 128 0 17 chr10 124861849 124862166 -20727122 + AluSx SINE Alu 1 312 0 291 214 34 34 chr10 124862376 124862465 -20726823 - L1ME LINE L1 -465 5656 5568 2479 83 0 6 chr10 124862529 124862842 -20726446 - AluY SINE Alu 0 311 1 1524 148 41 4 chr10 124862935 124863178 -20726110 - AluJb SINE Alu -60 252 1 1952 248 61 5 chr10 124865116 124865689 -20723599 + L1MD3 LINE L1 7375 7979 -16 2522 105 25 0 chr10 124865982 124866335 -20722953 + THE1B LTR MaLR 3 364 0 324 0 0 0 chr10 124867383 124867419 -20721869 + (TG)n Simple_repeat Simple_repeat 2 37 0 715 240 36 31 chr10 124867638 124867863 -20721425 + LTR67 LTR ERVL 331 556 -1 228 135 0 0 chr10 124868889 124868926 -20720362 + (TG)n Simple_repeat Simple_repeat 2 38 0 355 213 66 49 chr10 124869600 124869674 -20719614 - MIR SINE MIR -66 196 118 2501 138 8 10 chr10 124869674 124870065 -20719223 + MLT1B LTR MaLR 1 390 0 355 213 66 49 chr10 124870065 124870112 -20719176 - MIR SINE MIR -144 118 73 2086 135 0 16 chr10 124870153 124870465 -20718823 - AluJo SINE Alu -5 307 1 2291 110 0 3 chr10 124870978 124871288 -20718000 - AluSx SINE Alu -3 309 1 1972 133 21 0 chr10 124871739 124872024 -20717264 + AluSx SINE Alu 1 291 -21 2890 3 0 0 chr10 124873981 124874285 -20715003 + AluYa5 SINE Alu 1 304 -7 2671 55 0 0 chr10 124874700 124875010 -20714278 - AluY SINE Alu -1 310 1 25 0 0 0 chr10 124875608 124875633 -20713655 + AT_rich Low_complexity Low_complexity 1 25 0 2253 114 35 44 chr10 124876065 124876136 -20713152 - THE1B LTR MaLR 0 364 294 2169 125 10 0 chr10 124876136 124876439 -20712849 + AluSg SINE Alu 1 306 -4 2253 114 35 44 chr10 124876439 124876734 -20712554 - THE1B LTR MaLR -70 294 1 671 270 93 22 chr10 124876734 124876960 -20712328 - MIR SINE MIR -4 258 17 1713 74 32 0 chr10 124876960 124877176 -20712112 - AluSg SINE Alu -85 225 3 1922 163 33 27 chr10 124877613 124878105 -20711183 + MLT2A2 LTR ERVL 1 515 0 32 57 0 0 chr10 124878382 124878435 -20710853 + AT_rich Low_complexity Low_complexity 1 53 0 23 0 0 0 chr10 124878696 124878719 -20710569 + AT_rich Low_complexity Low_complexity 1 23 0 255 224 53 13 chr10 124878933 124879009 -20710279 - L2 LINE L2 0 3272 3194 335 330 141 73 chr10 124879025 124879231 -20710057 + MIR SINE MIR 14 233 -29 2207 131 0 0 chr10 124879330 124879642 -20709646 + AluSx SINE Alu 1 312 0 2197 98 28 0 chr10 124879849 124880134 -20709154 + AluSc SINE Alu 1 293 -16 2091 109 28 0 chr10 124880928 124881213 -20708075 - AluSx SINE Alu -19 293 1 282 204 43 43 chr10 124881826 124881919 -20707369 - LTR41 LTR ERVL -8 765 673 2322 86 27 3 chr10 124881926 124882227 -20707061 + AluSq SINE Alu 1 308 -5 575 246 48 21 chr10 124882706 124882893 -20706395 - LTR41 LTR ERVL -581 192 1 277 243 63 27 chr10 124882989 124883093 -20706195 + MIR3 SINE MIR 83 160 -48 368 238 129 6 chr10 124883506 124883663 -20705625 + L1MEc LINE L1 2207 2353 -4073 2203 111 0 10 chr10 124883683 124883990 -20705298 - AluSx SINE Alu -8 304 1 2051 134 10 0 chr10 124883992 124884283 -20705005 - AluSx SINE Alu -18 294 1 441 0 0 0 chr10 124884713 124884762 -20704526 + (CA)n Simple_repeat Simple_repeat 2 50 0 23 0 0 0 chr10 124885575 124885598 -20703690 + AT_rich Low_complexity Low_complexity 1 23 0 430 306 89 6 chr10 124885664 124885844 -20703444 - MIR SINE MIR -40 222 28 2044 141 3 7 chr10 124885983 124886287 -20703001 + AluJb SINE Alu 6 308 -4 276 274 110 0 chr10 124886674 124886747 -20702541 + MIR SINE MIR 50 130 -78 2074 133 46 27 chr10 124892242 124892610 -20696678 + THE1C LTR MaLR 1 375 0 1797 164 7 26 chr10 124893806 124894116 -20695172 - AluJb SINE Alu -8 304 1 303 346 24 39 chr10 124894127 124894254 -20695034 + L2 LINE L2 3148 3272 0 1865 140 3 27 chr10 124895855 124896155 -20693133 - AluJo SINE Alu -19 293 1 1640 164 30 33 chr10 124898360 124898659 -20690629 - AluJo SINE Alu -14 298 1 22 35 0 0 chr10 124898780 124898809 -20690479 + AT_rich Low_complexity Low_complexity 1 29 0 219 250 130 78 chr10 124898905 124899097 -20690191 + MIR SINE MIR 48 249 -13 202 214 0 71 chr10 124899954 124900024 -20689264 + GA-rich Low_complexity Low_complexity 3 67 0 855 234 92 13 chr10 124900025 124900264 -20689024 + MIR SINE MIR 5 262 0 313 368 11 0 chr10 124900343 124900438 -20688850 - MIR SINE MIR -97 111 16 489 287 63 0 chr10 124900548 124900691 -20688597 + MIR SINE MIR 77 228 -34 1528 163 38 75 chr10 124901025 124901345 -20687943 + AluJb SINE Alu 1 308 -4 2140 119 24 0 chr10 124901541 124901834 -20687454 - AluSx SINE Alu -12 300 1 185 263 0 0 chr10 124902448 124902486 -20686802 + L2 LINE L2 3186 3223 -49 280 255 87 13 chr10 124902757 124902906 -20686382 + Charlie7 DNA MER1_type 2453 2612 0 21 0 0 0 chr10 124903753 124903774 -20685514 + AT_rich Low_complexity Low_complexity 1 21 0 418 291 67 55 chr10 124904293 124904458 -20684830 - L2 LINE L2 0 3272 3106 912 248 47 0 chr10 124904503 124904717 -20684571 - MER58A DNA MER1_type 0 224 1 263 323 0 0 chr10 124904861 124904926 -20684362 + L2 LINE L2 3239 3303 -10 1143 337 167 37 chr10 124904946 124906499 -20682789 - L2 LINE L2 -459 2855 1100 1709 60 39 0 chr10 124908290 124908524 -20680764 + MER75B DNA T2_type 1 243 0 2116 134 0 0 chr10 124908841 124909140 -20680148 + AluSg SINE Alu 1 299 -11 1934 110 0 85 chr10 124909625 124909759 -20679529 + AluSx SINE Alu 1 145 -167 2439 89 3 3 chr10 124909759 124910072 -20679216 + AluSp SINE Alu 1 313 0 1934 110 0 85 chr10 124910072 124910294 -20678994 + AluSx SINE Alu 145 312 0 1858 127 35 0 chr10 124910295 124910554 -20678734 - AluSx SINE Alu -10 302 35 200 322 0 0 chr10 124911075 124911134 -20678154 + L2 LINE L2 3251 3309 -4 2349 113 0 0 chr10 124911283 124911592 -20677696 + AluSx SINE Alu 1 309 -3 304 293 12 12 chr10 124911805 124911887 -20677401 + L2 LINE L2 3209 3290 -23 23 0 0 0 chr10 124911925 124911948 -20677340 + AT_rich Low_complexity Low_complexity 1 23 0 786 289 68 32 chr10 124912011 124912319 -20676969 - L2 LINE L2 0 3313 2995 * 788 199 104 50 chr10 124912312 124912553 -20676735 - L2 LINE L2 -792 2522 2269 383 192 154 0 chr10 124912576 124912654 -20676634 - L2 LINE L2 -1008 2306 2217 2505 228 99 60 chr10 124912655 124912903 -20676385 - L1MEc LINE L1 -5253 1143 906 1783 130 38 38 chr10 124912903 124913195 -20676093 - AluJo SINE Alu -18 294 3 2505 228 99 60 chr10 124913195 124913993 -20675295 - L1MEc LINE L1 -5490 906 56 327 215 66 25 chr10 124915481 124915602 -20673686 - L1MEc LINE L1 -5872 524 399 22 70 0 0 chr10 124916030 124916073 -20673215 + AT_rich Low_complexity Low_complexity 1 43 0 240 135 58 0 chr10 124916392 124916444 -20672844 + AluSc SINE Alu 245 299 0 21 57 0 0 chr10 124917901 124917936 -20671352 + AT_rich Low_complexity Low_complexity 1 35 0 459 295 16 38 chr10 124918009 124918192 -20671096 + LTR33 LTR ERVL 10 188 -333 527 248 25 12 chr10 124918266 124918427 -20670861 + LTR33 LTR ERVL 354 516 -5 256 361 54 23 chr10 124919053 124919183 -20670105 + L3 LINE CR1 464 597 -980 301 367 48 68 chr10 124919228 124919539 -20669749 - L2 LINE L2 -78 3194 2890 1776 153 24 24 chr10 124919849 124920143 -20669145 + AluJb SINE Alu 1 294 -18 226 352 11 11 chr10 124920206 124920297 -20668991 + MER5A DNA MER1_type 9 99 -90 214 278 0 0 chr10 124920294 124920348 -20668940 + MIR SINE MIR 147 200 -62 * 497 194 36 22 chr10 124920562 124920701 -20668587 + L1MEd LINE L1 454 594 -5936 262 245 39 78 chr10 124920785 124920887 -20668401 + L1MEd LINE L1 872 969 -5561 430 252 27 9 chr10 124921130 124921241 -20668047 + MIR SINE MIR 150 262 0 897 60 0 0 chr10 124921530 124921646 -20667642 + (GGGAA)n Simple_repeat Simple_repeat 2 117 0 1111 88 0 11 chr10 124921650 124921831 -20667457 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 357 43 0 0 chr10 124921830 124921877 -20667411 + (CAGG)n Simple_repeat Simple_repeat 2 48 0 * 225 259 19 0 chr10 124922217 124922271 -20667017 - L2 LINE L2 -41 3231 3177 21 0 0 0 chr10 124922572 124922593 -20666695 + AT_rich Low_complexity Low_complexity 1 21 0 2190 116 0 7 chr10 124922658 124922950 -20666338 - AluSx SINE Alu -22 290 1 3652 236 69 27 chr10 124923357 124923465 -20665823 + L1MEd LINE L1 2261 2363 -4177 3570 173 34 58 chr10 124923465 124924069 -20665219 + MER44D DNA MER2_type 1 457 -2030 1703 173 18 3 chr10 124924069 124924352 -20664936 + AluJo SINE Alu 12 298 -14 3570 173 34 58 chr10 124924352 124924494 -20664794 + MER44D DNA MER2_type 457 601 -4 3652 236 69 27 chr10 124924494 124925503 -20663785 + L1MEd LINE L1 2363 3328 -3212 2305 102 0 0 chr10 124925503 124925806 -20663482 + AluSq SINE Alu 1 303 -10 3652 236 69 27 chr10 124925806 124925927 -20663361 + L1MEd LINE L1 3328 3442 -3098 1965 161 0 3 chr10 124925927 124926238 -20663050 + AluJb SINE Alu 1 310 -2 3652 236 69 27 chr10 124926238 124926703 -20662585 + L1MEd LINE L1 3442 4033 -2507 2472 177 36 51 chr10 124926705 124927258 -20662030 + L1MB8 LINE L1 5634 6178 0 1242 170 129 27 chr10 124927315 124927392 -20661896 - MER33 DNA MER1_type -2261 324 256 2187 113 0 0 chr10 124927392 124927713 -20661575 + AluSq SINE Alu 1 313 0 1242 170 129 27 chr10 124927713 124927929 -20661359 - MER33 DNA MER1_type -2329 256 1 1977 135 6 25 chr10 124928440 124928758 -20660530 + AluSq SINE Alu 1 312 -1 1966 147 0 26 chr10 124929178 124929491 -20659797 - AluJb SINE Alu -7 305 1 1217 154 62 14 chr10 124930010 124930218 -20659070 + MER20 DNA MER1_type 2 219 0 221 256 58 66 chr10 124930430 124930551 -20658737 - MIR SINE MIR -5 257 138 662 185 199 7 chr10 124930565 124930716 -20658572 + AluJo SINE Alu 120 299 -13 233 239 152 76 chr10 124930732 124930824 -20658464 - MIR SINE MIR -136 126 28 706 279 169 13 chr10 124930854 124931155 -20658133 - L2 LINE L2 0 3313 2966 2169 87 4 0 chr10 124931390 124931667 -20657621 + AluSc SINE Alu 29 306 -3 1598 184 0 26 chr10 124931672 124931981 -20657307 + AluJb SINE Alu 1 301 -11 2214 124 0 0 chr10 124931987 124932285 -20657003 + AluSx SINE Alu 1 298 -14 1952 158 47 11 chr10 124932322 124932684 -20656604 + L1MA9 LINE L1 5938 6312 0 222 311 132 9 chr10 124932918 124933024 -20656264 - MIR SINE MIR -76 186 68 577 291 29 12 chr10 124933202 124933374 -20655914 + MIR SINE MIR 31 205 -57 2671 143 42 2 chr10 124933712 124934167 -20655121 + L1MB2 LINE L1 5668 6140 -31 342 0 0 0 chr10 124936064 124936102 -20653186 + (TG)n Simple_repeat Simple_repeat 2 39 0 2211 114 0 7 chr10 124936113 124936420 -20652868 - AluSq SINE Alu -7 306 2 194 213 64 0 chr10 124936935 124936982 -20652306 + L2 LINE L2 3259 3308 -5 2173 101 3 0 chr10 124937410 124937697 -20651591 + AluSg1 SINE Alu 1 288 -21 1247 98 0 12 chr10 124937697 124937861 -20651427 + AluSg/x SINE Alu 134 295 -17 260 281 227 22 chr10 124938690 124938875 -20650413 + MER20B DNA MER1_type 54 276 -507 2175 81 0 0 chr10 124939014 124939285 -20650003 - AluSc SINE Alu -6 303 33 1486 169 7 78 chr10 124939699 124939995 -20649293 + AluJo SINE Alu 21 295 -17 1197 216 97 44 chr10 124940497 124940859 -20648429 + LTR8 LTR ERV1 311 691 0 321 215 127 13 chr10 124940941 124941020 -20648268 - L2 LINE L2 -1 3312 3225 21 0 0 0 chr10 124941198 124941219 -20648069 + AT_rich Low_complexity Low_complexity 1 21 0 2187 123 7 0 chr10 124941233 124941541 -20647747 - AluSx SINE Alu -2 310 1 930 201 0 0 chr10 124941914 124942068 -20647220 - FRAM SINE Alu -30 146 1 1490 175 30 15 chr10 124942344 124942612 -20646676 - AluJo SINE Alu -30 282 11 1544 165 0 50 chr10 124943262 124943565 -20645723 + AluJo SINE Alu 11 298 -14 192 359 22 22 chr10 124945178 124945270 -20644018 - MIR SINE MIR -105 103 12 1277 235 84 64 chr10 124947334 124948113 -20641175 + L1MC4a LINE L1 6451 7216 -632 332 296 16 16 chr10 124948136 124948261 -20641027 + L1MC4 LINE L1 7345 7469 -573 885 137 30 15 chr10 124948446 124948577 -20640711 + AluJo SINE Alu 1 133 -169 823 229 51 11 chr10 124948627 124948802 -20640486 + AluJo SINE Alu 131 312 0 3809 175 46 46 chr10 124948935 124949820 -20639468 + L1MC3 LINE L1 6835 7722 -63 2179 97 6 34 chr10 124949820 124950141 -20639147 - AluSx SINE Alu 0 312 1 3809 175 46 46 chr10 124950141 124950196 -20639092 + L1MC3 LINE L1 7721 7775 -10 1235 192 216 38 chr10 124950205 124950658 -20638630 - LTR64 LTR ERVK -2 556 23 336 212 81 20 chr10 124950725 124950824 -20638464 + L1MC5 LINE L1 7757 7861 -100 481 317 98 18 chr10 124952203 124952427 -20636861 - MIR SINE MIR 0 262 21 2248 74 10 3 chr10 124952465 124952762 -20636526 - AluSq SINE Alu -14 299 1 2073 113 31 3 chr10 124953570 124953861 -20635427 + AluSx SINE Alu 1 299 -13 208 326 125 49 chr10 124953999 124954183 -20635105 + L3 LINE CR1 908 1105 -472 2473 55 10 0 chr10 124954689 124954982 -20634306 - AluY SINE Alu -15 296 1 355 269 189 19 chr10 124955406 124955670 -20633618 - L1ME4a LINE L1 -13 6108 5800 1071 113 15 10 chr10 124955699 124955904 -20633384 - AluSq SINE Alu -10 303 4 332 270 70 70 chr10 124955908 124956108 -20633180 - L1ME4a LINE L1 -392 5729 5530 229 226 19 0 chr10 124956827 124956880 -20632408 - LTR16A LTR ERVL 0 450 397 2216 121 0 0 chr10 124957190 124957488 -20631800 - AluSx SINE Alu -14 298 1 2292 108 0 3 chr10 124957582 124957887 -20631401 - AluSq SINE Alu -9 304 1 2432 73 0 7 chr10 124958262 124958563 -20630725 - AluY SINE Alu -12 299 1 298 159 239 34 chr10 125059072 125059160 -20530128 - FLAM_C SINE Alu 0 133 28 656 238 12 31 chr10 125060366 125060526 -20528762 + AluJb SINE Alu 126 282 -30 194 0 39 0 chr10 125060530 125060556 -20528732 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1082 244 115 90 chr10 125060556 125060728 -20528560 - L1ME3A LINE L1 -2 6168 6002 2108 122 0 16 chr10 125060728 125061039 -20528249 - AluY SINE Alu -1 310 5 1082 244 115 90 chr10 125061039 125061563 -20527725 - L1ME3A LINE L1 -168 6002 5455 1184 202 27 8 chr10 125062026 125062288 -20527000 - L1MD3 LINE L1 0 7995 7729 264 266 0 0 chr10 125062287 125062351 -20526937 - L1MC/D LINE L1 -1982 5826 5763 * 288 185 62 0 chr10 125062361 125062426 -20526862 - L1ME4a LINE L1 -639 5523 5455 220 342 66 0 chr10 125062436 125062512 -20526776 + MIR3 SINE MIR 104 184 -24 276 250 139 42 chr10 125062576 125062720 -20526568 - L1MC/D LINE L1 -2070 5738 5581 553 289 148 4 chr10 125064743 125065013 -20524275 + L1ME LINE L1 5490 5798 -323 274 162 221 0 chr10 125065013 125065081 -20524207 + MIR SINE MIR 147 229 -33 235 204 148 34 chr10 125065106 125065194 -20524094 + L1ME LINE L1 5800 5897 -224 502 210 181 7 chr10 125065230 125065368 -20523920 + MIR SINE MIR 67 228 -34 2360 89 0 19 chr10 125065577 125065893 -20523395 - AluSp SINE Alu -3 310 1 905 174 37 42 chr10 125065926 125066116 -20523172 + MER5A DNA MER1_type 1 189 0 24 0 0 0 chr10 125067894 125067918 -20521370 + AT_rich Low_complexity Low_complexity 1 24 0 364 189 57 38 chr10 125068238 125068344 -20520944 - L1ME3A LINE L1 -9 6161 6054 28 48 0 0 chr10 125068444 125068486 -20520802 + AT_rich Low_complexity Low_complexity 1 42 0 1130 279 75 16 chr10 125069162 125069546 -20519742 - L1M3a LINE L1 -5520 435 29 2619 229 163 80 chr10 125069618 125071542 -20517746 - HAL1 LINE L1 -305 2202 118 21 0 0 0 chr10 125071556 125071577 -20517711 + AT_rich Low_complexity Low_complexity 1 21 0 1817 172 10 0 chr10 125071579 125071875 -20517413 + AluJb SINE Alu 1 299 -13 228 254 42 0 chr10 125072450 125072521 -20516767 - MIR SINE MIR -150 112 39 242 301 168 9 chr10 125072808 125072921 -20516367 + L2 LINE L2 3179 3309 -4 1826 146 11 0 chr10 125074803 125075112 -20514176 + AluSx SINE Alu 1 312 0 1308 105 0 0 chr10 125075548 125075720 -20513568 - AluY SINE Alu -11 300 129 2474 65 7 3 chr10 125075821 125076131 -20513157 - AluY SINE Alu 0 311 1 417 258 73 16 chr10 125076416 125076540 -20512748 - MIR SINE MIR -50 212 82 1991 126 3 16 chr10 125076781 125077090 -20512198 + AluSx SINE Alu 1 305 -7 877 153 93 0 chr10 125077810 125077960 -20511328 + FRAM SINE Alu 1 164 -2 225 0 0 0 chr10 125078505 125078530 -20510758 + (T)n Simple_repeat Simple_repeat 1 25 0 223 279 49 0 chr10 125079148 125079209 -20510079 - L2 LINE L2 -1 3271 3208 272 305 47 23 chr10 125081122 125081250 -20508038 - MIR SINE MIR -90 172 42 2717 167 47 0 chr10 125081441 125081933 -20507355 - MER72 LTR ERV1 0 722 208 1328 211 65 4 chr10 125081933 125082194 -20507094 + AluJo SINE Alu 1 277 -35 871 186 13 66 chr10 125082198 125082261 -20507027 - MER72 LTR ERV1 -500 222 157 1587 181 10 42 chr10 125082261 125082570 -20506718 + AluJo SINE Alu 1 299 -13 871 186 13 66 chr10 125082570 125082661 -20506627 - MER72 LTR ERV1 -565 157 81 1739 109 4 0 chr10 125082661 125082891 -20506397 + AluSq SINE Alu 58 288 -25 871 186 13 66 chr10 125082891 125082961 -20506327 - MER72 LTR ERV1 -641 81 9 840 181 148 26 chr10 125083573 125083661 -20505627 + MER33 DNA MER1_type 21 97 -2488 2542 99 0 0 chr10 125083661 125083973 -20505315 + AluSx SINE Alu 1 312 0 840 181 148 26 chr10 125083973 125084155 -20505133 + MER33 DNA MER1_type 97 324 0 315 314 8 0 chr10 125084521 125084645 -20504643 + L1ME4a LINE L1 5557 5681 -440 344 226 52 32 chr10 125084794 125084949 -20504339 + L1ME4a LINE L1 5941 6098 -23 193 340 0 0 chr10 125084997 125085050 -20504238 - MIR SINE MIR -4 258 206 247 167 50 17 chr10 125087011 125087071 -20502217 - MIR3 SINE MIR -33 175 114 2557 166 44 2 chr10 125087071 125087529 -20501759 - L1MC1 LINE L1 -19 6314 5838 269 313 15 0 chr10 125087651 125087718 -20501570 + L2 LINE L2 3245 3312 -1 235 314 33 58 chr10 125088226 125088347 -20500941 - MIR SINE MIR -55 207 90 313 268 85 46 chr10 125088666 125088819 -20500469 + MIR SINE MIR 47 205 -57 407 248 157 62 chr10 125088840 125089050 -20500238 - MIR SINE MIR -12 250 21 562 233 69 63 chr10 125090413 125090602 -20498686 + MIR SINE MIR 66 255 -7 218 302 142 9 chr10 125091312 125091418 -20497870 - MIR SINE MIR -14 248 129 2441 85 0 13 chr10 125092220 125092527 -20496761 + AluSq SINE Alu 1 303 -10 1631 115 0 5 chr10 125093375 125093593 -20495695 - AluSq SINE Alu -89 224 8 1212 122 0 6 chr10 125093961 125094125 -20495163 + AluSg/x SINE Alu 134 296 -14 345 281 21 10 chr10 125094312 125094408 -20494880 - MIR SINE MIR -75 133 37 795 286 68 84 chr10 125094829 125095005 -20494283 + L2 LINE L2 2507 2684 -588 3127 73 11 56 chr10 125095005 125095253 -20494035 - L1PA10 LINE L1 -2 6166 5947 2225 125 3 0 chr10 125095253 125095557 -20493731 - AluSx SINE Alu -7 305 1 3127 73 11 56 chr10 125095557 125095774 -20493514 - L1PA10 LINE L1 -221 5947 5722 795 286 68 84 chr10 125095774 125096317 -20492971 + L2 LINE L2 2684 3270 -2 540 222 37 2 chr10 125096914 125097058 -20492230 - MIR3 SINE MIR -67 141 5 230 294 0 0 chr10 125097082 125097133 -20492155 + MIR3 SINE MIR 110 160 -48 190 221 73 73 chr10 125097134 125097202 -20492086 + MER5B DNA MER1_type 2 69 -109 1890 108 65 0 chr10 125097822 125098101 -20491187 - AluSx SINE Alu -9 303 7 1737 101 0 0 chr10 125098683 125098900 -20490388 - AluSq SINE Alu -96 217 1 362 190 33 8 chr10 125099185 125099306 -20489982 + C-rich Low_complexity Low_complexity 2 125 0 1137 108 0 0 chr10 125099910 125100058 -20489230 + AluSq SINE Alu 150 297 -16 2058 156 0 3 chr10 125100072 125100373 -20488915 - AluJb SINE Alu -12 300 1 630 290 93 53 chr10 125101077 125101494 -20487794 - MLT1K LTR MaLR -7 581 148 1409 306 59 26 chr10 125101784 125102409 -20486879 + L1MC4 LINE L1 5304 5949 -1859 2382 89 0 7 chr10 125102630 125102934 -20486354 + AluSc SINE Alu 1 302 -7 402 288 88 19 chr10 125103461 125103621 -20485667 - MIR3 SINE MIR -30 178 8 227 277 180 25 chr10 125103795 125104158 -20485130 + L3 LINE CR1 1057 1534 -43 309 288 96 12 chr10 125104756 125104996 -20484292 - L1MC4a LINE L1 -1816 5992 5733 545 289 120 22 chr10 125105088 125105664 -20483624 - L1MC4a LINE L1 -774 5372 4971 252 315 154 14 chr10 125106725 125106868 -20482420 + MIR SINE MIR 89 251 -11 306 258 81 48 chr10 125107585 125107709 -20481579 + MIR SINE MIR 23 150 -58 2510 123 72 10 chr10 125107781 125108181 -20481107 - MSTB LTR MaLR 0 426 2 211 256 45 23 chr10 125108191 125108324 -20480964 + (TATATG)n Simple_repeat Simple_repeat 3 138 0 310 322 58 0 chr10 125108324 125108411 -20480877 + L1MC4 LINE L1 6612 6703 -1339 1887 159 3 0 chr10 125109026 125109316 -20479972 - AluJb SINE Alu -21 291 1 2491 78 0 3 chr10 125109330 125109638 -20479650 - AluY SINE Alu -4 307 1 727 170 19 6 chr10 125109698 125109857 -20479431 - L1MB7 LINE L1 0 6184 6024 3806 173 51 27 chr10 125109857 125110420 -20478868 + L1MB7 LINE L1 5338 5886 -298 2326 93 0 7 chr10 125110420 125110720 -20478568 - AluY SINE Alu -13 298 1 2368 101 0 0 chr10 125110723 125111021 -20478267 - AluSx SINE Alu -14 298 1 3806 173 51 27 chr10 125111021 125111280 -20478008 + L1MB7 LINE L1 5887 6184 0 296 240 66 83 chr10 125111422 125111543 -20477745 - MIR3 SINE MIR -3 205 87 2624 44 0 0 chr10 125112017 125112313 -20476975 + AluY SINE Alu 1 296 -15 774 136 0 0 chr10 125112313 125112431 -20476857 - L1MA2 LINE L1 -2 6302 6185 355 248 106 66 chr10 125112872 125113098 -20476190 - L1MC1 LINE L1 -412 5921 5687 2493 75 0 7 chr10 125113108 125113413 -20475875 - AluSq SINE Alu -5 308 6 2115 116 3 32 chr10 125113432 125113743 -20475545 - AluSx SINE Alu -10 302 1 318 397 16 0 chr10 125113830 125113956 -20475332 + MER5A DNA MER1_type 55 182 -7 336 301 159 6 chr10 125114049 125114212 -20475076 - MIR SINE MIR -73 189 2 354 330 127 24 chr10 125114365 125114577 -20474711 + MIR SINE MIR 29 262 0 2442 64 0 55 chr10 125114684 125115013 -20474275 - AluY SINE Alu 0 311 1 2306 113 0 0 chr10 125115300 125115602 -20473686 + AluSx SINE Alu 1 302 -10 391 186 55 10 chr10 125115971 125116117 -20473171 - MER58A DNA MER1_type 0 224 32 345 276 191 89 chr10 125116238 125116463 -20472825 + MIR SINE MIR 15 262 0 286 269 106 10 chr10 125116477 125116581 -20472707 + MIR SINE MIR 123 236 -26 592 225 139 12 chr10 125117385 125117558 -20471730 + MLT1J2 LTR MaLR 137 331 -119 315 0 0 0 chr10 125117610 125117645 -20471643 + (CA)n Simple_repeat Simple_repeat 2 36 0 239 257 126 46 chr10 125119150 125119325 -20469963 - MLT1K LTR MaLR -22 566 378 1356 279 90 40 chr10 125119752 125120474 -20468814 - L2 LINE L2 -40 3273 2454 1933 125 6 62 chr10 125120474 125120795 -20468493 - AluSx SINE Alu -8 304 2 1356 279 90 40 chr10 125120795 125121254 -20468034 - L2 LINE L2 -859 2454 2019 186 257 54 122 chr10 125121324 125121472 -20467816 + L2 LINE L2 3163 3300 -13 538 176 189 70 chr10 125121549 125121647 -20467641 - MER5C DNA MER1_type 0 324 239 2109 141 0 0 chr10 125121647 125121945 -20467343 + AluSx SINE Alu 1 298 -14 538 176 189 70 chr10 125121945 125122073 -20467215 - MER5C DNA MER1_type -85 239 71 545 253 79 17 chr10 125122264 125122442 -20466846 + MER5A DNA MER1_type 1 189 0 1862 134 3 67 chr10 125122506 125122820 -20466468 - AluJb SINE Alu -18 294 1 198 259 17 17 chr10 125122851 125122909 -20466379 + MER5B DNA MER1_type 6 63 -115 2317 114 7 0 chr10 125123173 125123479 -20465809 - AluSx SINE Alu 0 312 5 230 258 247 0 chr10 125125717 125125806 -20463482 - L2 LINE L2 -18 3254 3144 215 282 13 39 chr10 125126081 125126159 -20463129 + MIR SINE MIR 123 198 -64 624 311 39 51 chr10 125126216 125126550 -20462738 - L2 LINE L2 0 3313 2984 1766 177 23 7 chr10 125126736 125127036 -20462252 - AluJo SINE Alu -7 305 1 267 319 99 21 chr10 125127378 125127519 -20461769 + MIR SINE MIR 28 179 -83 241 270 16 0 chr10 125127807 125127870 -20461418 - MIR SINE MIR -64 144 81 2099 122 21 0 chr10 125128019 125128305 -20460983 - AluSx SINE Alu -20 292 1 474 331 0 0 chr10 125129238 125129407 -20459881 + (CAGG)n Simple_repeat Simple_repeat 4 172 0 681 278 33 1 chr10 125129548 125129763 -20459525 + MIR SINE MIR 29 248 -14 492 324 85 0 chr10 125130278 125130454 -20458834 - MIR SINE MIR -45 217 27 369 271 47 0 chr10 125131355 125131462 -20457826 + MIR SINE MIR 134 245 -17 542 287 41 33 chr10 125131462 125131706 -20457582 + L1M4 LINE L1 4893 5138 -1008 323 246 101 65 chr10 125132665 125132803 -20456485 + MIR SINE MIR 120 262 0 220 237 68 0 chr10 125132918 125132977 -20456311 + (CATG)n Simple_repeat Simple_repeat 3 65 0 395 225 0 11 chr10 125132986 125133075 -20456213 + MER112 DNA MER1_type 78 165 -95 1971 128 0 0 chr10 125133185 125133467 -20455821 - AluJo SINE Alu -15 297 16 1355 154 90 10 chr10 125133689 125133988 -20455300 - L1MC3 LINE L1 0 7785 7463 332 251 55 68 chr10 125133992 125134155 -20455133 + L2 LINE L2 2689 2849 -465 306 295 28 83 chr10 125134169 125134423 -20454865 + L2 LINE L2 2986 3225 -47 452 237 199 13 chr10 125134472 125134742 -20454546 - MLT1J LTR MaLR -38 473 102 183 196 0 87 chr10 125135585 125135631 -20453657 - L2 LINE L2 -18 3254 3213 894 93 0 0 chr10 125135894 125136012 -20453276 + AluSp/q SINE Alu 184 301 -12 691 282 20 20 chr10 125136482 125136677 -20452611 - L2 LINE L2 0 3313 3119 617 250 206 3 chr10 125136683 125136979 -20452309 - L2 LINE L2 -1758 1556 1201 2059 122 3 0 chr10 125137997 125138292 -20450996 + AluSq SINE Alu 1 296 -17 2099 117 0 3 chr10 125138710 125139008 -20450280 - AluSq SINE Alu -16 297 1 319 296 170 0 chr10 125139717 125139923 -20449365 - L1M4 LINE L1 -1838 4308 4068 295 270 122 39 chr10 125139954 125140291 -20448997 - L1M4 LINE L1 -2146 4000 3636 332 294 170 36 chr10 125140305 125140680 -20448608 - L1M4 LINE L1 -2763 3383 2826 22 0 0 0 chr10 125141016 125141038 -20448250 + AT_rich Low_complexity Low_complexity 1 22 0 194 338 27 0 chr10 125142546 125142620 -20446668 + MIR SINE MIR 64 139 -69 2179 100 7 0 chr10 125144097 125144388 -20444900 + AluSx SINE Alu 1 293 -19 704 118 17 50 chr10 125144565 125144684 -20444604 + FLAM_C SINE Alu 2 116 -17 22 35 0 0 chr10 125144684 125144713 -20444575 + AT_rich Low_complexity Low_complexity 1 29 0 251 216 19 147 chr10 125145481 125145598 -20443690 + MIR3 SINE MIR 43 149 -59 2336 203 50 64 chr10 125145598 125146160 -20443128 + MLT2B3 LTR ERVL 1 554 0 369 280 76 0 chr10 125146836 125146968 -20442320 + MIR SINE MIR 56 197 -65 194 240 27 53 chr10 125147795 125147870 -20441418 - MIR SINE MIR -70 192 120 2085 122 3 0 chr10 125149312 125149608 -20439680 - AluSx SINE Alu -15 297 1 279 318 106 0 chr10 125149655 125149806 -20439482 + L2 LINE L2 2578 2744 -570 196 349 60 0 chr10 125149954 125150037 -20439251 + L2 LINE L2 3142 3229 -43 290 360 11 11 chr10 125151030 125151208 -20438080 + G-rich Low_complexity Low_complexity 2 179 0 348 377 5 0 chr10 125151231 125151754 -20437534 + G-rich Low_complexity Low_complexity 1 525 0 324 358 13 8 chr10 125151767 125152059 -20437229 + G-rich Low_complexity Low_complexity 1 293 0 281 333 0 0 chr10 125152125 125152239 -20437049 + G-rich Low_complexity Low_complexity 3 116 0 265 336 0 16 chr10 125152252 125152377 -20436911 + G-rich Low_complexity Low_complexity 4 126 0 200 336 259 0 chr10 125153559 125153702 -20435586 + L3b LINE CR1 1278 1457 -126 201 256 0 0 chr10 125154025 125154064 -20435224 + (CA)n Simple_repeat Simple_repeat 2 40 0 214 234 64 43 chr10 125154949 125155043 -20434245 + MIR SINE MIR 96 191 -71 2141 104 3 3 chr10 125155921 125156229 -20433059 - AluSx SINE Alu -4 308 1 432 0 0 0 chr10 125158236 125158284 -20431004 + (TG)n Simple_repeat Simple_repeat 2 49 0 261 336 43 0 chr10 125158288 125158404 -20430884 + (CATG)n Simple_repeat Simple_repeat 2 122 0 * 301 351 0 9 chr10 125158318 125158429 -20430859 + (TG)n Simple_repeat Simple_repeat 1 110 0 225 330 58 10 chr10 125158437 125158540 -20430748 + MIR SINE MIR 31 138 -70 * 239 289 16 15 chr10 125158538 125158674 -20430614 - MIR SINE MIR -2 260 36 271 351 35 29 chr10 125159376 125159550 -20429738 + MIR SINE MIR 24 198 -64 186 264 256 8 chr10 125160551 125160672 -20428616 + MIR SINE MIR 111 261 -1 2279 94 0 0 chr10 125160862 125161171 -20428117 + AluSg SINE Alu 1 309 -1 260 285 23 69 chr10 125162079 125162209 -20427079 + MIR3 SINE MIR 71 194 -14 265 279 0 0 chr10 125162716 125162784 -20426504 + (TCCA)n Simple_repeat Simple_repeat 2 69 0 371 315 169 12 chr10 125162804 125163058 -20426230 - L3 LINE CR1 -25 1552 1259 445 272 79 40 chr10 125163371 125163573 -20425715 + L1ME LINE L1 5472 5663 -458 1825 152 7 3 chr10 125163578 125163867 -20425421 + AluJb SINE Alu 1 290 -22 2108 115 6 13 chr10 125164458 125164770 -20424518 + AluSx SINE Alu 1 310 -2 2036 148 0 0 chr10 125164873 125165176 -20424112 + AluSx SINE Alu 1 303 -9 583 278 182 21 chr10 125165815 125166157 -20423131 + MLT1J2 LTR MaLR 76 439 -11 2611 89 59 7 chr10 125167133 125167538 -20421750 - L1PB2 LINE L1 -2 6149 5724 840 283 124 16 chr10 125167870 125167905 -20421383 + L2 LINE L2 2677 2707 -606 2793 75 19 6 chr10 125167905 125168264 -20421024 + THE1B LTR MaLR 1 364 0 840 283 124 16 chr10 125168264 125168713 -20420575 + L2 LINE L2 2707 3226 -87 238 278 0 0 chr10 125169467 125169521 -20419767 + MIR SINE MIR 92 145 -117 1874 135 3 26 chr10 125170246 125170549 -20418739 - AluSx SINE Alu -13 299 4 454 307 120 0 chr10 125171075 125171267 -20418021 + MIR SINE MIR 26 240 -22 2443 159 35 7 chr10 125172192 125172614 -20416674 + LTR23 LTR ERV1 4 437 0 419 272 56 91 chr10 125172626 125172813 -20416475 + MIR SINE MIR 1 188 -74 300 27 0 0 chr10 125173139 125173176 -20416112 + (TA)n Simple_repeat Simple_repeat 1 37 0 1754 116 47 4 chr10 125173176 125173434 -20415854 - AluSx SINE Alu -22 290 22 773 233 22 56 chr10 125173560 125173792 -20415496 - MER58A DNA MER1_type 0 224 1 316 262 58 10 chr10 125175829 125175932 -20413356 + MIR SINE MIR 47 154 -108 277 213 49 0 chr10 125176431 125176492 -20412796 + MIR SINE MIR 47 110 -152 311 336 80 0 chr10 125176570 125176707 -20412581 - MIR SINE MIR -66 196 49 348 271 75 15 chr10 125176727 125176860 -20412428 - L2 LINE L2 -1 3312 3172 237 257 212 62 chr10 125176998 125177224 -20412064 - L2 LINE L2 -354 2960 2701 1039 198 0 0 chr10 125177289 125177461 -20411827 - FAM SINE Alu -3 172 1 1952 108 29 0 chr10 125179564 125179841 -20409447 + AluSx SINE Alu 27 311 -1 242 278 102 8 chr10 125180813 125180931 -20408357 + MIR SINE MIR 35 166 -70 345 320 79 48 chr10 125181128 125181332 -20407956 + L1MC4a LINE L1 5532 5753 -2055 2384 67 0 3 chr10 125181332 125181630 -20407658 + AluY SINE Alu 1 297 -14 345 320 79 48 chr10 125181630 125181781 -20407507 + L1MC4a LINE L1 5753 5898 -1910 448 281 86 8 chr10 125182346 125182474 -20406814 - L2 LINE L2 -2 3270 3133 220 204 0 20 chr10 125182690 125182739 -20406549 + G-rich Low_complexity Low_complexity 1 48 0 408 278 168 21 chr10 125183312 125183503 -20405785 + MIR SINE MIR 44 262 0 1321 194 134 6 chr10 125184556 125184870 -20404418 + L1ME2 LINE L1 5644 5997 -167 258 56 28 0 chr10 125184882 125184918 -20404370 + MER3 DNA MER1_type 13 49 -160 319 240 90 0 chr10 125184918 125185018 -20404270 + L1ME2 LINE L1 6055 6163 -1 409 287 112 12 chr10 125185020 125185192 -20404096 + MIR SINE MIR 18 203 -59 2203 46 42 3 chr10 125185293 125185578 -20403710 + AluY SINE Alu 1 296 -15 1835 151 14 115 chr10 125185669 125185848 -20403440 + MLT1B LTR MaLR 1 196 -194 2163 99 10 0 chr10 125185848 125186142 -20403146 + AluSx SINE Alu 1 297 -15 1835 151 14 115 chr10 125186142 125186165 -20403123 + MLT1B LTR MaLR 196 220 -170 1503 123 87 47 chr10 125186165 125186442 -20402846 + AluJb SINE Alu 1 288 -24 1835 151 14 115 chr10 125186442 125186655 -20402633 + MLT1B LTR MaLR 220 375 -15 229 327 0 0 chr10 125187316 125187371 -20401917 + L3b LINE CR1 1528 1582 -1 2307 93 0 3 chr10 125187448 125187758 -20401530 + AluSc SINE Alu 1 309 0 1565 170 14 31 chr10 125187932 125188220 -20401068 - MER50 LTR ERV1 -19 715 433 1330 138 39 30 chr10 125188208 125188440 -20400848 - MER50 LTR ERV1 -500 234 1 * 1813 194 179 2 chr10 125188525 125188954 -20400334 + MLT1D LTR MaLR 1 505 0 266 195 345 0 chr10 125189008 125189095 -20400193 + L2 LINE L2 3197 3313 0 194 236 36 18 chr10 125190416 125190471 -20398817 - L2 LINE L2 -2657 657 602 2270 106 0 0 chr10 125190932 125191244 -20398044 + AluSx SINE Alu 1 312 0 1313 171 39 105 chr10 125193581 125193914 -20395374 - AluJo SINE Alu -1 311 1 1702 178 90 28 chr10 125193931 125194318 -20394970 - L1MB5 LINE L1 -13 6161 5751 374 290 130 6 chr10 125194346 125194508 -20394780 - L1ME1 LINE L1 -2 6164 5983 495 227 45 21 chr10 125194525 125194678 -20394610 - L1ME1 LINE L1 -262 5889 5743 775 207 41 0 chr10 125194820 125194989 -20394299 - MER5B DNA MER1_type 0 178 3 1908 133 3 17 chr10 125195211 125195513 -20393775 + AluSq SINE Alu 1 298 -15 767 146 46 23 chr10 125195614 125195744 -20393544 + FLAM_A SINE Alu 1 133 0 229 324 35 55 chr10 125196511 125196656 -20392632 + L2 LINE L2 3122 3263 -9 577 249 24 41 chr10 125198060 125198229 -20391059 + MIR SINE MIR 48 213 -49 2123 107 0 7 chr10 125198361 125198671 -20390617 + AluSx SINE Alu 1 308 -4 1483 258 125 21 chr10 125199078 125199589 -20389699 + MLT1K LTR MaLR 2 565 -23 213 248 144 28 chr10 125199664 125199783 -20389505 - MIR SINE MIR -85 123 31 633 292 120 28 chr10 125200790 125201081 -20388207 + MLT1K LTR MaLR 254 571 -17 874 92 156 0 chr10 125201428 125201569 -20387719 - AluSg/x SINE Alu -14 296 134 273 268 8 166 chr10 125201643 125201733 -20387555 - MER112 DNA MER1_type -6 254 151 321 102 20 0 chr10 125201733 125201782 -20387506 + L1MC1 LINE L1 6275 6324 -9 273 268 8 166 chr10 125201782 125201863 -20387425 - MER112 DNA MER1_type -109 151 137 1785 157 0 3 chr10 125201863 125202150 -20387138 + AluJb SINE Alu 3 288 -24 273 268 8 166 chr10 125202150 125202242 -20387046 - MER112 DNA MER1_type -123 137 32 859 267 108 0 chr10 125202294 125202545 -20386743 - MER46C DNA MER2_type -15 323 46 525 150 72 87 chr10 125202569 125202776 -20386512 + Charlie5 DNA MER1_type 2421 2624 0 395 225 139 0 chr10 125204559 125204688 -20384600 - MIR SINE MIR -81 181 35 219 114 0 0 chr10 125204739 125204774 -20384514 + (TAA)n Simple_repeat Simple_repeat 2 36 0 2297 95 0 0 chr10 125204804 125205108 -20384180 + AluSq SINE Alu 1 304 -9 2043 214 22 63 chr10 125206159 125206657 -20382631 + MLT2B1 LTR ERVL 1 477 -43 762 60 0 0 chr10 125206657 125206757 -20382531 + (TAGA)n Simple_repeat Simple_repeat 1 100 0 2043 214 22 63 chr10 125206757 125206800 -20382488 + MLT2B1 LTR ERVL 477 520 0 2096 104 87 38 chr10 125207084 125207431 -20381857 - THE1B LTR MaLR 0 364 1 234 324 176 0 chr10 125207890 125207992 -20381296 - L2 LINE L2 0 3313 3194 412 303 101 25 chr10 125208206 125208404 -20380884 + MIR SINE MIR 48 260 -2 1331 234 59 50 chr10 125208414 125208872 -20380416 + MLT1C LTR MaLR 6 467 0 377 305 119 35 chr10 125209638 125209864 -20379424 - MIR SINE MIR -6 256 12 637 192 77 32 chr10 125209975 125210131 -20379157 - MIR SINE MIR -53 209 47 1664 215 61 30 chr10 125210442 125210883 -20378405 - MLT1C LTR MaLR -12 455 1 27 62 0 0 chr10 125211592 125211640 -20377648 + AT_rich Low_complexity Low_complexity 1 48 0 1744 157 0 32 chr10 125211894 125212206 -20377082 - AluJo SINE Alu -10 302 1 2130 95 3 10 chr10 125212856 125213161 -20376127 + AluSg SINE Alu 1 303 -7 2783 135 79 54 chr10 125214192 125214587 -20374701 + L1MA9 LINE L1 5699 6083 -229 1673 156 18 0 chr10 125214587 125214885 -20374403 - AluJb SINE Alu 0 303 1 2783 135 79 54 chr10 125214885 125214938 -20374350 + L1MA9 LINE L1 6083 6133 -179 387 0 0 0 chr10 125214938 125214981 -20374307 + (CA)n Simple_repeat Simple_repeat 2 44 0 2783 135 79 54 chr10 125214981 125215123 -20374165 + L1MA9 LINE L1 6133 6307 -5 668 190 7 36 chr10 125215339 125215476 -20373812 + AluJo/FLAM SINE Alu 1 133 -169 2527 33 0 0 chr10 125215478 125215780 -20373508 + AluY SINE Alu 1 302 -9 261 288 105 21 chr10 125215781 125215972 -20373316 - L1MC5 LINE L1 -36 7925 7719 225 309 109 61 chr10 125216139 125216304 -20372984 + MIR3 SINE MIR 36 208 0 203 352 67 48 chr10 125217018 125217123 -20372165 + L2 LINE L2 2948 3054 -218 2134 62 4 4 chr10 125217709 125217985 -20371303 + L1PA7 LINE L1 5877 6152 -2 306 278 22 11 chr10 125218777 125218867 -20370421 - L1MC3 LINE L1 -1135 6650 6560 334 267 118 15 chr10 125219026 125219161 -20370127 - L1MC3 LINE L1 -1880 5928 5780 1084 180 10 5 chr10 125219209 125219409 -20369879 + AluJb SINE Alu 85 285 -27 1966 123 3 0 chr10 125219509 125219793 -20369495 + AluSx SINE Alu 1 285 -27 206 31 0 31 chr10 125219807 125219839 -20369449 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 180 250 42 21 chr10 125220147 125220195 -20369093 - L2 LINE L2 -65 3248 3200 207 211 0 35 chr10 125220978 125221035 -20368253 + GA-rich Low_complexity Low_complexity 4 58 0 1456 215 46 6 chr10 125221200 125221526 -20367762 + MER58B DNA MER1_type 1 339 -2 1299 179 26 18 chr10 125221535 125221808 -20367480 - MER58D DNA MER1_type -55 331 57 1618 163 54 7 chr10 125221857 125222152 -20367136 + AluJo SINE Alu 1 309 -3 180 246 14 145 chr10 125222411 125222549 -20366739 - L2 LINE L2 -12 3301 3182 21 0 0 0 chr10 125223811 125223832 -20365456 + AT_rich Low_complexity Low_complexity 1 21 0 1963 136 3 7 chr10 125225098 125225400 -20363888 + AluSx SINE Alu 4 304 -8 21 0 0 0 chr10 125225619 125225640 -20363648 + AT_rich Low_complexity Low_complexity 1 21 0 293 274 29 20 chr10 125226511 125226613 -20362675 + MIR SINE MIR 110 212 -50 690 296 142 46 chr10 125226773 125227043 -20362245 + L1MC/D LINE L1 4737 4980 -1166 3048 159 8 80 chr10 125227043 125227746 -20361542 + L1MB7 LINE L1 5532 6184 0 690 296 142 46 chr10 125227746 125227934 -20361354 + L1MC/D LINE L1 4980 5239 -907 1109 294 39 35 chr10 125227944 125228437 -20360851 + L1MC/D LINE L1 5255 5749 -2059 1645 185 7 52 chr10 125228543 125228753 -20360535 + L1MA4A LINE L1 5916 6101 -202 2164 108 3 7 chr10 125228753 125229058 -20360230 - AluSp SINE Alu -8 305 2 1645 185 7 52 chr10 125229058 125229253 -20360035 + L1MA4A LINE L1 6101 6303 0 355 298 32 8 chr10 125229456 125229580 -20359708 + GA-rich Low_complexity Low_complexity 1 127 0 22 0 0 0 chr10 125229822 125229844 -20359444 + AT_rich Low_complexity Low_complexity 1 22 0 1084 170 0 0 chr10 125232420 125232585 -20356703 + FRAM SINE Alu 2 166 0 21 0 0 0 chr10 125232603 125232624 -20356664 + AT_rich Low_complexity Low_complexity 1 21 0 311 302 81 13 chr10 125233700 125233849 -20355439 - MIR SINE MIR -20 242 84 795 287 98 44 chr10 125234389 125234846 -20354442 + L2 LINE L2 2828 3309 -4 184 337 33 43 chr10 125235676 125235768 -20353520 - L2 LINE L2 -1 3271 3181 441 336 110 32 chr10 125236328 125236605 -20352683 - L1ME2 LINE L1 -282 5882 5628 2455 76 3 3 chr10 125236605 125236907 -20352381 + AluSg SINE Alu 1 302 -8 441 336 110 32 chr10 125236907 125237209 -20352079 - L1ME2 LINE L1 -536 5628 5259 262 304 181 76 chr10 125237344 125237371 -20351917 - L2 LINE L2 -11 3261 3238 2298 132 0 0 chr10 125237371 125237682 -20351606 - AluSx SINE Alu -1 311 1 262 304 181 76 chr10 125237682 125238062 -20351226 - L2 LINE L2 -34 3238 2811 1843 164 7 13 chr10 125238270 125238575 -20350713 + AluJo SINE Alu 5 307 -5 212 139 0 23 chr10 125240774 125240817 -20348471 + (GGGA)n Simple_repeat Simple_repeat 4 45 0 1231 166 43 50 chr10 125243260 125243562 -20345726 - L1ME1 LINE L1 -5 6161 5862 576 234 9 0 chr10 125243720 125243831 -20345457 + MER81 DNA DNA 1 112 -2 582 224 49 60 chr10 125244743 125244926 -20344362 - MIR3 SINE MIR -27 181 1 360 249 54 160 chr10 125245241 125245554 -20343734 - L2 LINE L2 -1 3271 2992 247 309 0 12 chr10 125245718 125245802 -20343486 + MIR SINE MIR 99 181 -81 265 222 19 0 chr10 125246111 125246165 -20343123 - MIR SINE MIR -64 144 90 935 186 17 0 chr10 125246879 125247051 -20342237 + MER5B DNA MER1_type 4 178 0 29 28 0 0 chr10 125250874 125250910 -20338378 + GC_rich Low_complexity Low_complexity 1 36 0 618 294 69 18 chr10 125251786 125251923 -20337365 - MIR SINE MIR -2 260 107 2176 102 3 3 chr10 125251923 125252216 -20337072 + AluSg SINE Alu 1 293 -17 618 294 69 18 chr10 125252216 125252296 -20336992 - MIR SINE MIR -155 107 32 574 180 0 0 chr10 125252302 125252402 -20336886 - AluJ SINE Alu -10 302 203 4948 114 12 1 chr10 125252405 125253160 -20336128 + L1PA15 LINE L1 5402 6164 -1 30 0 0 0 chr10 125253173 125253203 -20336085 + AT_rich Low_complexity Low_complexity 1 30 0 2219 113 10 3 chr10 125253246 125253555 -20335733 + AluSx SINE Alu 1 311 -1 808 234 46 15 chr10 125253604 125253801 -20335487 - AluJb SINE Alu -98 214 12 184 280 121 81 chr10 125253869 125254201 -20335087 - L2 LINE L2 -102 3170 2826 182 282 91 27 chr10 125254508 125254618 -20334670 - L2 LINE L2 -30 3283 3167 307 300 86 11 chr10 125255199 125255324 -20333964 - MIR SINE MIR -67 141 15 343 264 179 0 chr10 125256186 125256292 -20332996 - MIR SINE MIR -54 208 84 306 262 16 0 chr10 125256579 125256640 -20332648 + L2 LINE L2 3211 3272 0 238 167 0 67 chr10 125256776 125256836 -20332452 - L2 LINE L2 -212 3060 3005 4446 118 23 3 chr10 125256852 125257538 -20331750 - L1MB4 LINE L1 0 6180 5481 234 152 0 65 chr10 125257681 125257727 -20331561 - MIR3 SINE MIR -53 155 113 186 298 95 51 chr10 125258249 125258407 -20330881 - MIR3 SINE MIR -2 206 42 190 209 66 99 chr10 125258967 125259058 -20330230 - MIR3 SINE MIR -14 194 107 195 228 198 40 chr10 125259912 125260013 -20329275 + L2 LINE L2 1966 2082 -1232 6217 28 3 1 chr10 125260090 125260845 -20328443 - L1PA3 LINE L1 0 6155 5436 7343 19 1 0 chr10 125260845 125261762 -20327526 + L1P LINE L1 4511 5428 -727 259 296 43 17 chr10 125262088 125262203 -20327085 - MIR SINE MIR -60 148 31 806 193 61 48 chr10 125262406 125262506 -20326782 + MER106A DNA MER1_type 4 101 -135 333 47 0 0 chr10 125262506 125262549 -20326739 + (GA)n Simple_repeat Simple_repeat 2 44 0 806 193 61 48 chr10 125262549 125262676 -20326612 + MER106A DNA MER1_type 101 234 -2 743 284 68 0 chr10 125262676 125262898 -20326390 + MIR SINE MIR 20 256 -6 1795 191 7 3 chr10 125263214 125263518 -20325770 - AluJo SINE Alu -7 305 1 505 289 173 0 chr10 125263558 125263714 -20325574 - MER5A DNA MER1_type 0 189 7 200 214 18 0 chr10 125264015 125264071 -20325217 + GA-rich Low_complexity Low_complexity 1 57 0 225 215 38 89 chr10 125264393 125264472 -20324816 - L2 LINE L2 -2926 388 314 1831 158 90 11 chr10 125264529 125264896 -20324392 + MSTD LTR MaLR 1 396 0 250 357 99 24 chr10 125265109 125265322 -20323966 + MIR SINE MIR 27 255 -7 2116 133 0 31 chr10 125265409 125265731 -20323557 - AluJb SINE Alu 0 312 1 2640 52 0 3 chr10 125266211 125266518 -20322770 + AluY SINE Alu 1 306 -5 2559 181 11 49 chr10 125266544 125267096 -20322192 - L1MB8 LINE L1 0 6178 5648 213 290 65 51 chr10 125267161 125267299 -20321989 + L2 LINE L2 2353 2492 -822 188 292 21 0 chr10 125267440 125267488 -20321800 + L2 LINE L2 3223 3271 -42 344 248 38 25 chr10 125267605 125267630 -20321658 - L1MA10 LINE L1 0 6334 6310 783 188 43 12 chr10 125267630 125267880 -20321408 - L1ME1 LINE L1 -15 6151 5811 1024 237 26 19 chr10 125267981 125268461 -20320827 - L1ME1 LINE L1 -498 5666 4981 265 256 35 0 chr10 125268564 125268650 -20320638 + MER96 DNA MER1_type? 84 172 -3 2375 95 20 0 chr10 125268938 125269242 -20320046 - AluSx SINE Alu -2 310 1 1886 194 3 0 chr10 125269872 125270182 -20319106 - 7SLRNA srpRNA srpRNA -9 311 1 2247 117 0 0 chr10 125270220 125270510 -20318778 - AluSx SINE Alu -18 294 5 1402 132 33 0 chr10 125270845 125271087 -20318201 - L1MA8 LINE L1 -4 6287 6038 299 191 66 24 chr10 125271095 125271115 -20318173 - MLT1C LTR MaLR -342 125 107 2635 138 68 6 chr10 125271115 125271586 -20317702 - L1PA16 LINE L1 0 6166 5667 299 191 66 24 chr10 125271586 125271676 -20317612 - MLT1C LTR MaLR -360 107 1 277 264 9 104 chr10 125272330 125272436 -20316852 + MER5B DNA MER1_type 5 100 -78 227 329 14 0 chr10 125273081 125273151 -20316137 + MIR SINE MIR 182 252 -10 1104 94 0 20 chr10 125274216 125274365 -20314923 - AluY SINE Alu -122 189 44 2404 62 34 0 chr10 125274524 125274816 -20314472 - AluY SINE Alu -9 302 1 693 309 28 0 chr10 125274873 125275051 -20314237 - MIR SINE MIR -77 185 3 364 282 122 8 chr10 125275324 125275455 -20313833 - MIR SINE MIR -48 214 69 411 255 148 25 chr10 125275626 125275822 -20313466 + MIR SINE MIR 16 235 -27 347 315 123 30 chr10 125279126 125279329 -20309959 + L1M4 LINE L1 3956 4177 -1969 589 296 104 38 chr10 125279348 125279999 -20309289 + L1M4 LINE L1 4298 4991 -1155 1797 165 3 10 chr10 125280003 125280294 -20308994 + AluJb SINE Alu 3 291 -21 207 0 0 0 chr10 125280302 125280325 -20308963 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2312 116 0 0 chr10 125282532 125282833 -20306455 + AluSx SINE Alu 1 301 -11 644 265 61 15 chr10 125282892 125283088 -20306200 - MIR SINE MIR -56 206 2 1834 164 0 20 chr10 125283638 125283942 -20305346 + AluJb SINE Alu 1 298 -14 314 264 186 36 chr10 125284388 125284581 -20304707 - MIR SINE MIR -25 237 16 192 255 226 28 chr10 125285749 125285855 -20303433 + MIR3 SINE MIR 15 141 -67 1676 157 82 0 chr10 125285885 125286165 -20303123 + AluJb SINE Alu 7 309 -3 345 47 0 0 chr10 125286167 125286210 -20303078 + (GGGAA)n Simple_repeat Simple_repeat 3 45 0 708 54 0 0 chr10 125286352 125286445 -20302843 + (GGGAA)n Simple_repeat Simple_repeat 2 94 0 542 328 36 5 chr10 125286778 125286973 -20302315 - MIR SINE MIR -36 226 26 2051 128 24 18 chr10 125287314 125287649 -20301639 - L1MC1 LINE L1 0 6333 5997 1686 134 4 0 chr10 125288137 125288402 -20300886 - AluSx SINE Alu 0 310 45 1891 204 82 72 chr10 125288416 125288825 -20300463 - L1ME3A LINE L1 -5 6165 5747 1776 166 31 0 chr10 125288825 125289115 -20300173 + AluJb SINE Alu 3 301 -11 1891 204 82 72 chr10 125289115 125289304 -20299984 - L1ME3A LINE L1 -423 5747 5561 5820 133 42 0 chr10 125291508 125292536 -20296752 - L1PA16 LINE L1 -1 6165 5107 322 285 179 20 chr10 125293890 125294041 -20295247 + MIR3 SINE MIR 21 195 -13 1501 168 56 19 chr10 125294067 125294335 -20294953 + AluJo SINE Alu 1 278 -34 322 196 9 98 chr10 125294584 125294696 -20294592 - MIR SINE MIR -50 212 111 2852 81 0 14 chr10 125295430 125295799 -20293489 - THE1B LTR MaLR 0 364 1 291 213 27 13 chr10 125295843 125295918 -20293370 - MER5B DNA MER1_type -7 171 96 197 370 50 0 chr10 125296108 125296208 -20293080 + L2 LINE L2 3182 3286 -27 1943 160 3 6 chr10 125296288 125296601 -20292687 - AluJb SINE Alu 0 312 1 191 217 43 0 chr10 125296710 125296756 -20292532 + L2 LINE L2 3184 3231 -82 2265 107 3 0 chr10 125297025 125297315 -20291973 - AluSx SINE Alu -21 291 1 2186 111 0 0 chr10 125298193 125298473 -20290815 + AluSx SINE Alu 1 280 -32 774 84 0 0 chr10 125298478 125298585 -20290703 + (GGAA)n Simple_repeat Simple_repeat 2 108 0 878 153 17 74 chr10 125299793 125299969 -20289319 + AluSg/x SINE Alu 135 300 -10 1781 137 17 31 chr10 125300036 125300328 -20288960 - AluJb SINE Alu -24 288 1 484 139 25 0 chr10 125301238 125301317 -20287971 + MLT1C LTR MaLR 1 81 -386 313 316 39 36 chr10 125301599 125301765 -20287523 + MIR SINE MIR 7 172 -68 2324 100 0 0 chr10 125301821 125302120 -20287168 - AluSx SINE Alu -13 299 1 203 244 47 47 chr10 125302184 125302270 -20287018 - MIR SINE MIR -131 131 46 328 154 0 0 chr10 125302815 125302867 -20286421 + MER66A LTR ERV1 287 338 -140 207 0 0 0 chr10 125303164 125303187 -20286101 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 198 0 0 0 chr10 125304322 125304344 -20284944 + (CA)n Simple_repeat Simple_repeat 1 22 0 2107 137 3 3 chr10 125304350 125304649 -20284639 - AluSq SINE Alu -14 299 1 1768 123 4 19 chr10 125304864 125305133 -20284155 + AluJb SINE Alu 46 310 -2 281 324 43 14 chr10 125305647 125305786 -20283502 + MIR3 SINE MIR 49 191 -17 186 133 0 0 chr10 125307130 125307160 -20282128 + (A)n Simple_repeat Simple_repeat 1 30 0 1770 158 7 23 chr10 125307167 125307471 -20281817 + AluJo SINE Alu 1 299 -13 352 325 70 6 chr10 125307723 125307880 -20281408 + MIR SINE MIR 48 214 -48 241 289 0 0 chr10 125308126 125308178 -20281110 + polypyrimidine Low_complexity Low_complexity 3 54 0 189 147 0 0 chr10 125308178 125308212 -20281076 + (TCCA)n Simple_repeat Simple_repeat 2 35 0 412 294 153 46 chr10 125308214 125308626 -20280662 - L2 LINE L2 -21 3292 2837 2380 92 3 3 chr10 125309347 125309653 -20279635 + AluSx SINE Alu 1 306 -6 734 302 18 0 chr10 125309894 125310119 -20279169 - MIR SINE MIR -22 240 12 2980 58 16 3 chr10 125310507 125310888 -20278400 + L1PA10 LINE L1 5779 6164 -4 2514 68 0 10 chr10 125311619 125311927 -20277361 + AluY SINE Alu 1 305 -6 307 337 51 34 chr10 125312304 125312482 -20276806 + MIR3 SINE MIR 20 200 -8 1160 88 0 0 chr10 125312993 125313130 -20276158 - AluSq/x SINE Alu -176 137 1 22 0 0 0 chr10 125314117 125314139 -20275149 + AT_rich Low_complexity Low_complexity 1 22 0 1545 132 124 23 chr10 125314704 125314970 -20274318 + AluJo SINE Alu 2 294 -8 450 0 0 0 chr10 125317036 125317086 -20272202 + (CA)n Simple_repeat Simple_repeat 2 51 0 2265 124 0 0 chr10 125320063 125320370 -20268918 - AluSx SINE Alu -1 311 5 1750 179 10 10 chr10 125321004 125321316 -20267972 - AluJb SINE Alu 0 312 1 289 297 40 0 chr10 125321528 125321602 -20267686 + MER81 DNA DNA 1 77 -37 195 258 65 118 chr10 125323161 125323206 -20266082 + L2 LINE L2 3208 3247 -66 1824 148 39 0 chr10 125323206 125323372 -20265916 - AluJo SINE Alu -17 295 112 210 37 0 0 chr10 125323372 125323399 -20265889 + (TTG)n Simple_repeat Simple_repeat 1 27 0 1824 148 39 0 chr10 125323399 125323516 -20265772 - AluJo SINE Alu -200 112 1 195 258 65 118 chr10 125323516 125323563 -20265725 + L2 LINE L2 3247 3295 -18 325 366 38 9 chr10 125324779 125324992 -20264296 - MIR SINE MIR -22 240 22 287 287 11 21 chr10 125325129 125325238 -20264050 + MIR SINE MIR 30 137 -71 282 284 86 108 chr10 125325367 125325599 -20263689 + MIR SINE MIR 19 245 -17 1914 88 12 4 chr10 125325602 125325853 -20263435 - AluY SINE Alu -18 293 41 2479 86 0 0 chr10 125326065 125326368 -20262920 - AluSq SINE Alu -10 303 1 231 114 0 0 chr10 125326428 125326463 -20262825 + (A)n Simple_repeat Simple_repeat 1 35 0 189 107 0 0 chr10 125326900 125326928 -20262360 + (A)n Simple_repeat Simple_repeat 1 28 0 430 215 329 0 chr10 125327277 125327496 -20261792 - L1ME4a LINE L1 -14 6107 5817 1518 184 4 8 chr10 125328522 125328783 -20260505 - AluJb SINE Alu -8 304 45 2117 142 0 19 chr10 125329323 125329641 -20259647 - AluSx SINE Alu 0 312 1 294 306 131 6 chr10 125329900 125330060 -20259228 - MIR3 SINE MIR -25 183 4 394 227 93 16 chr10 125333054 125333183 -20256105 - L2 LINE L2 0 3313 3134 928 135 0 29 chr10 125333709 125333879 -20255409 - L1M4 LINE L1 -847 5299 5135 238 288 15 0 chr10 125334488 125334554 -20254734 + L2 LINE L2 3245 3311 -2 715 176 78 73 chr10 125334667 125334712 -20254576 + MER6B DNA MER2_type 1 44 -821 2613 40 0 7 chr10 125334712 125335013 -20254275 - AluY SINE Alu -12 299 1 715 176 78 73 chr10 125335013 125335172 -20254116 + MER6B DNA MER2_type 44 206 -4 26 0 0 0 chr10 125335824 125335850 -20253438 + AT_rich Low_complexity Low_complexity 1 26 0 2302 117 0 3 chr10 125336162 125336470 -20252818 - AluSx SINE Alu -5 307 1 2141 89 4 4 chr10 125337188 125337492 -20251796 - AluY SINE Alu 0 304 1 2627 52 0 3 chr10 125337688 125337995 -20251293 + AluY SINE Alu 1 306 -5 901 332 54 0 chr10 125338255 125338719 -20250569 + L2 LINE L2 2824 3312 -1 2192 125 3 0 chr10 125339059 125339362 -20249926 + AluSx SINE Alu 1 304 -8 422 295 83 67 chr10 125339576 125339760 -20249528 - MIR SINE MIR -3 259 68 1799 157 0 62 chr10 125339760 125339792 -20249496 - AluJo SINE Alu -6 306 274 191 36 36 0 chr10 125339792 125339820 -20249468 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1799 157 0 62 chr10 125339820 125340112 -20249176 - AluJo SINE Alu -38 274 2 422 295 83 67 chr10 125340112 125340181 -20249107 - MIR SINE MIR -194 68 2 220 203 0 40 chr10 125340541 125340615 -20248673 + A-rich Low_complexity Low_complexity 5 75 0 554 250 22 88 chr10 125341066 125341168 -20248120 - MIR SINE MIR -49 213 133 661 170 7 64 chr10 125341168 125341309 -20247979 - FLAM_C SINE Alu 0 133 1 554 250 22 88 chr10 125341309 125341434 -20247854 - MIR SINE MIR -129 133 1 21 36 0 0 chr10 125342396 125342424 -20246864 + AT_rich Low_complexity Low_complexity 1 28 0 269 306 25 82 chr10 125343152 125343303 -20245985 + L2 LINE L2 2550 2689 -625 2490 71 0 0 chr10 125343303 125343598 -20245690 - AluY SINE Alu -16 295 1 269 306 25 82 chr10 125343598 125343642 -20245646 + L2 LINE L2 2689 2734 -580 2293 136 32 0 chr10 125343656 125344002 -20245286 + THE1B LTR MaLR 1 357 -7 447 308 114 32 chr10 125344105 125344482 -20244806 + L2 LINE L2 2904 3311 -2 2381 77 0 7 chr10 125345278 125345600 -20243688 + AluSq SINE Alu 1 320 0 656 264 85 21 chr10 125345833 125346068 -20243220 - MIR SINE MIR -6 256 7 2053 122 3 3 chr10 125346654 125346940 -20242348 - AluSg SINE Alu -24 286 1 1835 116 80 47 chr10 125347311 125347673 -20241615 + THE1C LTR MaLR 2 375 0 199 304 120 22 chr10 125347894 125347986 -20241302 + MIR SINE MIR 1 101 -161 238 316 96 44 chr10 125348017 125348153 -20241135 + MIR SINE MIR 104 246 -16 2075 135 3 3 chr10 125352265 125352561 -20236727 - AluSx SINE Alu -16 296 1 1226 80 12 0 chr10 125354049 125354212 -20235076 - BC200 scRNA scRNA -34 166 2 351 0 0 0 chr10 125354212 125354219 -20235069 + (TG)n Simple_repeat Simple_repeat 1 46 0 351 0 0 0 chr10 125354219 125354258 -20235030 + (TG)n Simple_repeat Simple_repeat 2 40 0 550 189 0 0 chr10 125354296 125354391 -20234897 - FLAM_C SINE Alu -25 118 24 183 42 0 0 chr10 125354471 125354495 -20234793 + (TC)n Simple_repeat Simple_repeat 1 24 0 1093 193 58 0 chr10 125356845 125357052 -20232236 + MER20 DNA MER1_type 1 219 0 1826 133 13 66 chr10 125359478 125359659 -20229629 - AluJo SINE Alu -12 300 142 2445 75 0 3 chr10 125359659 125359953 -20229335 - AluSc SINE Alu -15 294 2 1826 133 13 66 chr10 125359953 125360088 -20229200 - AluJo SINE Alu -170 142 1 221 274 29 53 chr10 125360405 125360547 -20228741 + MER5A DNA MER1_type 5 133 -45 582 97 54 0 chr10 125360563 125360656 -20228632 - L1MB1 LINE L1 0 6168 6071 2296 97 3 0 chr10 125360945 125361235 -20228053 - AluSc SINE Alu -13 296 6 2332 73 0 0 chr10 125361336 125361611 -20227677 - AluSg SINE Alu -27 283 9 1753 145 0 0 chr10 125361670 125361918 -20227370 - AluSx SINE Alu -64 248 1 25 0 0 0 chr10 125362834 125362859 -20226429 + AT_rich Low_complexity Low_complexity 1 25 0 2199 123 0 3 chr10 125362861 125363163 -20226125 + AluSx SINE Alu 1 301 -11 1695 169 0 37 chr10 125363461 125363781 -20225507 - AluJo SINE Alu 0 309 1 619 251 188 20 chr10 125414212 125414467 -20174821 + L2 LINE L2 3016 3313 0 2098 117 0 0 chr10 125414510 125414815 -20174473 - AluSx SINE Alu 0 305 1 2364 220 56 16 chr10 125415506 125416005 -20173283 + LTR40a LTR ERVL 1 519 0 480 266 18 0 chr10 125417190 125417299 -20171989 + MIR3 SINE MIR 52 162 -46 1857 127 3 52 chr10 125417546 125417891 -20171397 - AluSx SINE Alu 0 336 6 573 90 0 0 chr10 125418469 125418547 -20170741 + L1PA10 LINE L1 6091 6168 0 1151 151 77 64 chr10 125418547 125418770 -20170518 - MER33 DNA MER1_type -2283 302 83 2100 129 3 10 chr10 125418770 125419080 -20170208 - AluSc SINE Alu -1 308 1 2239 116 0 6 chr10 125419085 125419396 -20169892 - AluSq SINE Alu -4 309 1 1151 151 77 64 chr10 125419396 125419464 -20169824 - MER33 DNA MER1_type -2505 80 1 547 183 29 17 chr10 125419755 125419930 -20169358 + CT-rich Low_complexity Low_complexity 4 180 0 319 109 0 0 chr10 125419936 125419982 -20169306 - L1MC2 LINE L1 -26 6318 6273 612 117 170 0 chr10 125420872 125420966 -20168322 - FLAM_A SINE Alu -32 110 1 245 314 0 14 chr10 125420967 125421037 -20168251 - L2 LINE L2 -7 3306 3238 275 298 205 32 chr10 125421118 125421615 -20167673 - L2 LINE L2 -632 2682 2100 1666 279 87 33 chr10 125422069 125422932 -20166356 + L2 LINE L2 2392 3311 -2 421 224 59 88 chr10 125422932 125423102 -20166186 - MER46A DNA MER2_type -69 167 3 * 1236 197 0 22 chr10 125422961 125423189 -20166099 + MER46A DNA MER2_type 3 225 -11 480 249 89 16 chr10 125423325 125423672 -20165616 - MER113 DNA MER1_type? -90 431 6 210 356 62 20 chr10 125424480 125424626 -20164662 + MER5A DNA MER1_type 6 157 -32 4053 132 25 34 chr10 125424631 125425217 -20164071 - Tigger3(Golem) DNA MER2_type -3 3025 2435 1020 143 0 117 chr10 125425217 125425382 -20163906 + FAM SINE Alu 1 141 -170 2153 133 3 0 chr10 125425382 125425675 -20163613 - AluSx SINE Alu -17 295 2 1020 143 0 117 chr10 125425675 125425705 -20163583 + FAM SINE Alu 141 173 -2 243 61 0 0 chr10 125425705 125425738 -20163550 + (CA)n Simple_repeat Simple_repeat 2 34 0 4053 132 25 34 chr10 125425738 125425877 -20163411 - Tigger3(Golem) DNA MER2_type -591 2437 2306 691 184 0 0 chr10 125425881 125425984 -20163304 - Tigger3(Golem) DNA MER2_type -2923 106 4 2180 118 0 31 chr10 125426119 125426440 -20162848 + AluSx SINE Alu 1 311 -1 428 345 130 17 chr10 125428197 125428542 -20160746 - L3b LINE CR1 -94 1489 1106 188 256 0 0 chr10 125428994 125429037 -20160251 - L2 LINE L2 -93 3220 3178 467 161 11 0 chr10 125430376 125430463 -20158825 + AluY SINE Alu 216 303 -8 199 383 26 45 chr10 125430697 125430851 -20158437 - L2 LINE L2 0 3272 3122 384 270 32 16 chr10 125431065 125431191 -20158097 + HAL1b LINE L1 1203 1330 -18 225 246 18 0 chr10 125431389 125431446 -20157842 + L1MD3 LINE L1 7834 7891 -104 1927 145 0 36 chr10 125431475 125431778 -20157510 + AluSx SINE Alu 11 302 -10 376 182 0 15 chr10 125431782 125431848 -20157440 + L2 LINE L2 3249 3313 0 2166 109 0 26 chr10 125432178 125432482 -20156806 - AluSg SINE Alu -13 297 2 584 327 40 10 chr10 125432526 125432725 -20156563 - MIR SINE MIR -55 207 3 703 261 88 13 chr10 125432807 125433033 -20156255 - MIR SINE MIR 0 262 20 404 238 166 13 chr10 125433352 125433503 -20155785 - MIR SINE MIR -58 204 31 2530 65 0 3 chr10 125433697 125434007 -20155281 - AluY SINE Alu -2 309 1 21 0 0 0 chr10 125434456 125434477 -20154811 + AT_rich Low_complexity Low_complexity 1 21 0 2278 102 0 0 chr10 125434679 125434972 -20154316 + AluSx SINE Alu 1 293 -19 929 239 33 0 chr10 125435170 125435383 -20153905 + MIR SINE MIR 22 241 -21 2885 16 0 0 chr10 125435821 125436131 -20153157 + AluYb8 SINE Alu 1 310 -8 1028 83 7 14 chr10 125436175 125436320 -20152968 + L1PA10 LINE L1 6022 6165 -3 21 71 0 0 chr10 125436804 125436846 -20152442 + AT_rich Low_complexity Low_complexity 1 42 0 270 302 108 43 chr10 125436983 125437122 -20152166 + MIR3 SINE MIR 19 166 -42 2287 80 7 0 chr10 125437221 125437509 -20151779 - AluSq SINE Alu -2 311 22 222 343 98 7 chr10 125438303 125438446 -20150842 + L2 LINE L2 2973 3128 -185 1610 170 0 50 chr10 125438471 125438509 -20150779 - L1M2 LINE L1 -679 5633 5595 1884 155 19 23 chr10 125438509 125438818 -20150470 - AluJb SINE Alu -4 308 1 1610 170 0 50 chr10 125438818 125439096 -20150192 - L1M2 LINE L1 -717 5595 5333 216 0 0 0 chr10 125440252 125440276 -20149012 + (TTTTC)n Simple_repeat Simple_repeat 1 24 0 6625 164 25 15 chr10 125440276 125440907 -20148381 - L1PA16 LINE L1 0 6166 5543 360 0 0 0 chr10 125440907 125440947 -20148341 + (TA)n Simple_repeat Simple_repeat 2 41 0 * 585 0 0 0 chr10 125440946 125441011 -20148277 + (TG)n Simple_repeat Simple_repeat 2 66 0 6625 164 25 15 chr10 125440947 125442550 -20146738 - L1PA16 LINE L1 -623 5543 3982 1541 195 40 61 chr10 125443765 125443903 -20145385 - LTR37B LTR ERV1 0 468 329 1608 188 0 20 chr10 125443903 125444195 -20145093 + AluJo SINE Alu 1 286 -26 181 0 69 0 chr10 125444195 125444224 -20145064 + (TA)n Simple_repeat Simple_repeat 1 31 0 1541 195 40 61 chr10 125444224 125444562 -20144726 - LTR37B LTR ERV1 -137 331 1 1605 123 31 4 chr10 125444583 125444843 -20144445 + L1MB3 LINE L1 5915 6181 -2 306 253 74 0 chr10 125445103 125445198 -20144090 - L1MC/D LINE L1 -1985 5823 5722 2408 99 0 3 chr10 125445329 125445643 -20143645 + AluSq SINE Alu 1 313 0 2193 128 3 0 chr10 125445710 125446016 -20143272 + AluSq SINE Alu 1 307 -6 2320 95 0 3 chr10 125449569 125449863 -20139425 - AluSq SINE Alu -7 306 14 315 326 0 11 chr10 125450972 125451064 -20138224 + MIR3 SINE MIR 108 198 -10 2474 70 3 3 chr10 125451982 125452284 -20137004 + AluSx SINE Alu 1 302 -10 319 276 89 67 chr10 125452365 125452590 -20136698 - MIR SINE MIR -13 249 20 257 321 188 9 chr10 125452834 125452946 -20136342 + MER5A DNA MER1_type 57 188 -1 344 269 29 0 chr10 125453751 125453855 -20135433 - MIR SINE MIR -59 149 43 2289 108 3 3 chr10 125454540 125454847 -20134441 - AluSx SINE Alu -5 307 1 199 273 13 39 chr10 125454860 125454937 -20134351 + MER5A DNA MER1_type 64 138 -51 1910 139 3 36 chr10 125455033 125455342 -20133946 - AluJo SINE Alu -12 300 2 307 295 94 34 chr10 125456633 125456867 -20132421 + MIR SINE MIR 15 262 0 256 135 0 0 chr10 125456942 125456979 -20132309 + L1MC4a LINE L1 5542 5578 -543 506 281 83 83 chr10 125457099 125457354 -20131934 + MER90 LTR ERV1 151 409 -166 2129 100 11 4 chr10 125457354 125457666 -20131622 + AluSq SINE Alu 1 314 0 506 281 83 83 chr10 125457666 125457819 -20131469 + MER90 LTR ERV1 408 560 -15 745 284 61 31 chr10 125457829 125458156 -20131132 + L1MC4a LINE L1 5605 5941 -1867 24 0 0 0 chr10 125458311 125458335 -20130953 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr10 125458572 125458593 -20130695 + AT_rich Low_complexity Low_complexity 1 21 0 2439 141 8 3 chr10 125458652 125459036 -20130252 - L1MC1 LINE L1 -19 6314 5929 405 234 84 52 chr10 125459332 125459486 -20129802 + MIR SINE MIR 90 248 -14 298 274 131 0 chr10 125459624 125459708 -20129580 - MER51C LTR ERV1 -258 382 288 * 675 225 264 25 chr10 125459693 125459977 -20129311 - MER51A LTR ERV1 -282 352 1 27 29 0 0 chr10 125460951 125460985 -20128303 + AT_rich Low_complexity Low_complexity 1 34 0 1560 168 14 47 chr10 125462663 125462960 -20126328 + AluJo SINE Alu 1 287 -25 413 290 76 7 chr10 125463085 125463230 -20126058 + MIR SINE MIR 10 164 -98 311 244 22 22 chr10 125463533 125463623 -20125665 - MIR3 SINE MIR -10 198 109 26 30 0 0 chr10 125463990 125464023 -20125265 + AT_rich Low_complexity Low_complexity 1 33 0 2250 150 10 125 chr10 125465891 125466411 -20122877 + LOR1b LTR ERV1 1 460 -1 276 130 0 0 chr10 125467154 125467200 -20122088 + (TG)n Simple_repeat Simple_repeat 2 47 0 922 150 0 0 chr10 125467573 125467743 -20121545 + FLAM_A SINE Alu 1 170 0 971 172 17 6 chr10 125468401 125468581 -20120707 + L1MB5 LINE L1 5648 5829 -345 1810 124 32 127 chr10 125468581 125468959 -20120329 + MER7A DNA MER2_type 1 340 -6 1938 138 11 34 chr10 125468962 125469317 -20119971 + L1MB5 LINE L1 5827 6173 -1 608 119 10 10 chr10 125470500 125470601 -20118687 + AluY SINE Alu 2 102 -216 2307 108 0 6 chr10 125470829 125471143 -20118145 + AluSx SINE Alu 1 312 0 23 33 0 0 chr10 125471514 125471544 -20117744 + AT_rich Low_complexity Low_complexity 1 30 0 452 185 92 25 chr10 125472592 125472711 -20116577 + MER96 DNA MER1_type? 2 128 -47 183 209 23 0 chr10 125472956 125472999 -20116289 + MIR SINE MIR 78 121 -87 225 200 80 0 chr10 125474408 125474458 -20114830 - L2 LINE L2 0 3272 3219 1346 209 29 29 chr10 125475190 125475501 -20113787 - AluJb SINE Alu -1 311 1 1138 129 5 52 chr10 125475607 125475800 -20113488 + Tigger2a DNA MER2_type 1 184 -250 1071 170 16 0 chr10 125475909 125476091 -20113197 - AluJb SINE Alu -4 308 124 832 167 35 0 chr10 125476553 125476697 -20112591 + MER5A DNA MER1_type 1 149 -40 361 161 0 0 chr10 125476800 125476862 -20112426 + MER5A DNA MER1_type 128 189 0 215 380 62 0 chr10 125478297 125478410 -20110878 + L3b LINE CR1 1215 1334 -249 220 288 144 59 chr10 125478833 125478986 -20110302 + MIR SINE MIR 23 188 -74 2495 152 49 7 chr10 125479750 125480197 -20109091 + MLT1C LTR MaLR 1 466 -1 186 320 0 0 chr10 125480359 125480409 -20108879 + L2 LINE L2 3004 3053 -219 2256 104 3 0 chr10 125480921 125481220 -20108068 + AluSq SINE Alu 3 302 -11 881 229 80 0 chr10 125481323 125481524 -20107764 + MER20 DNA MER1_type 3 219 0 340 283 25 8 chr10 125482742 125482862 -20106426 + MIR3 SINE MIR 66 187 -21 207 0 0 0 chr10 125482914 125482937 -20106351 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2866 13 0 0 chr10 125487203 125487511 -20101777 - AluY SINE Alu -3 308 1 2211 97 13 3 chr10 125488603 125488901 -20100387 - AluSx SINE Alu -11 301 1 384 309 125 34 chr10 125489019 125489314 -20099974 - L2 LINE L2 -6 3266 2945 2160 130 0 10 chr10 125489917 125490225 -20099063 + AluSx SINE Alu 1 305 -7 199 231 0 62 chr10 125490275 125490340 -20098948 + MER5A DNA MER1_type 63 123 -66 21 0 0 0 chr10 125491425 125491446 -20097842 + AT_rich Low_complexity Low_complexity 1 21 0 355 231 106 0 chr10 125491589 125491693 -20097595 - MIR SINE MIR -30 232 118 423 0 0 0 chr10 125491789 125491836 -20097452 + (CA)n Simple_repeat Simple_repeat 2 48 0 270 286 87 8 chr10 125492657 125492783 -20096505 + MIR SINE MIR 48 183 -79 4665 191 64 36 chr10 125492783 125493411 -20095877 + MER45B DNA AcHobo 1 671 -910 2297 99 0 0 chr10 125493411 125493733 -20095555 + AluSx SINE Alu 1 322 0 4665 191 64 36 chr10 125493733 125494107 -20095181 + MER45B DNA AcHobo 671 1033 -7 252 0 0 0 chr10 125494414 125494442 -20094846 + (A)n Simple_repeat Simple_repeat 1 28 0 1241 262 76 52 chr10 125494498 125495045 -20094243 - L2 LINE L2 0 3313 2747 1639 159 7 45 chr10 125495045 125495358 -20093930 - AluJo SINE Alu 0 304 3 1241 262 76 52 chr10 125495358 125495470 -20093818 - L2 LINE L2 -566 2747 2639 1687 239 78 78 chr10 125495697 125496500 -20092788 + HAL1b LINE L1 90 892 -456 1858 181 7 0 chr10 125496743 125497042 -20092246 - AluJo SINE Alu -11 301 1 21 0 0 0 chr10 125497134 125497155 -20092133 + AT_rich Low_complexity Low_complexity 1 21 0 2589 68 0 0 chr10 125497165 125497472 -20091816 + AluY SINE Alu 1 307 -4 380 71 18 0 chr10 125497472 125497528 -20091760 + (TA)n Simple_repeat Simple_repeat 1 57 0 1109 227 122 4 chr10 125498358 125498636 -20090652 + LTR16C LTR ERVL 160 470 -21 31 0 0 0 chr10 125500131 125500162 -20089126 + AT_rich Low_complexity Low_complexity 1 31 0 2174 119 0 10 chr10 125500162 125500464 -20088824 - AluSx SINE Alu -13 299 1 3167 199 8 2 chr10 125501241 125501864 -20087424 + L1MB7 LINE L1 5539 6165 -19 21 0 0 0 chr10 125502112 125502133 -20087155 + AT_rich Low_complexity Low_complexity 1 21 0 286 274 29 29 chr10 125502156 125502258 -20087030 + MIR SINE MIR 29 130 -78 1933 134 0 14 chr10 125502281 125502565 -20086723 + AluSx SINE Alu 1 280 -32 495 0 0 0 chr10 125502566 125502621 -20086667 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 2318 103 0 3 chr10 125503019 125503320 -20085968 - AluSg SINE Alu -10 300 1 564 268 74 26 chr10 125504030 125504261 -20085027 - MIR SINE MIR -13 249 8 500 287 69 61 chr10 125506225 125506426 -20082862 + MIR SINE MIR 2 207 -55 1632 195 0 7 chr10 125506426 125506733 -20082555 + AluJo SINE Alu 1 305 -7 500 287 69 61 chr10 125506733 125506778 -20082510 + MIR SINE MIR 207 250 -12 31 58 0 0 chr10 125507436 125507488 -20081800 + AT_rich Low_complexity Low_complexity 1 52 0 362 135 0 0 chr10 125507488 125507540 -20081748 - U4 snRNA snRNA -1 144 93 728 145 0 83 chr10 125507632 125507777 -20081511 - FLAM_A SINE Alu 0 133 1 304 325 91 7 chr10 125508240 125508394 -20080894 - MIR SINE MIR -81 181 15 1411 192 14 136 chr10 125509098 125509155 -20080133 + L1MD3 LINE L1 5433 5495 -689 2340 105 3 0 chr10 125509155 125509459 -20079829 + AluSx SINE Alu 1 305 -7 1411 192 14 136 chr10 125509459 125509687 -20079601 + L1MD3 LINE L1 5495 5312 -872 432 135 0 27 chr10 125509687 125509761 -20079527 + U13 snRNA snRNA 33 104 0 1411 192 14 136 chr10 125509761 125510101 -20079187 + L1MD3 LINE L1 5311 5691 -493 * 2099 179 60 27 chr10 125509775 125510255 -20079033 + L1MB7 LINE L1 5679 6174 -10 203 200 0 83 chr10 125512301 125512361 -20076927 - L3b LINE CR1 -1 1582 1528 1784 139 24 37 chr10 125512396 125512690 -20076598 + AluJo SINE Alu 4 293 -19 845 70 44 0 chr10 125512761 125512875 -20076413 - L1PA5 LINE L1 0 6154 6036 228 282 164 9 chr10 125512932 125513042 -20076246 - MIR3 SINE MIR -68 140 14 941 121 0 13 chr10 125513474 125513623 -20075665 + L1PB1 LINE L1 6005 6151 0 2264 100 7 0 chr10 125517711 125518002 -20071286 - AluSx SINE Alu -11 301 9 2136 62 4 0 chr10 125518156 125518416 -20070872 + AluY SINE Alu 35 295 -16 303 205 94 53 chr10 125519528 125519699 -20069589 + Charlie7 DNA MER1_type 2432 2609 -3 355 306 146 5 chr10 125519839 125520038 -20069250 + MIR SINE MIR 29 255 -7 301 250 0 45 chr10 125520158 125520246 -20069042 - Charlie8 DNA MER1_type -2191 226 143 1396 202 46 7 chr10 125520809 125521111 -20068177 - L1ME2 LINE L1 -7 6157 5844 654 230 0 15 chr10 125521788 125521923 -20067365 - FLAM_A SINE Alu 0 133 1 203 0 37 0 chr10 125522595 125522622 -20066666 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 1564 176 29 20 chr10 125523775 125524081 -20065207 - AluJb SINE Alu -3 309 1 3082 216 32 77 chr10 125524209 125525149 -20064139 - L1ME3 LINE L1 -1 6161 5180 1682 162 6 48 chr10 125525149 125525463 -20063825 - AluJo SINE Alu -11 301 1 212 75 0 25 chr10 125525468 125525508 -20063780 + (TTTA)n Simple_repeat Simple_repeat 1 39 0 2060 128 0 4 chr10 125525508 125525789 -20063499 - AluSx SINE Alu -32 280 1 3082 216 32 77 chr10 125525789 125525999 -20063289 - L1ME3 LINE L1 -984 5178 5069 367 194 19 46 chr10 125526167 125526275 -20063013 + MER58C DNA MER1_type 104 208 -7 2397 86 3 3 chr10 125526365 125526669 -20062619 + AluSp SINE Alu 2 305 -8 244 196 0 0 chr10 125526859 125526910 -20062378 + HAL1 LINE L1 2457 2507 0 769 278 28 0 chr10 125527193 125527409 -20061879 - MIR SINE MIR -26 236 15 2151 124 3 7 chr10 125528199 125528506 -20060782 - AluSq SINE Alu -7 306 1 1853 172 0 13 chr10 125533238 125533546 -20055742 + AluJo SINE Alu 1 304 -8 228 225 0 0 chr10 125533589 125533629 -20055659 + polypyrimidine Low_complexity Low_complexity 1 40 0 1937 165 10 3 chr10 125533629 125533938 -20055350 - AluJo SINE Alu -1 311 1 342 234 80 15 chr10 125534137 125534274 -20055014 + MER103 DNA DNA 20 165 -1 201 308 99 11 chr10 125534342 125534433 -20054855 - MIR3 SINE MIR -23 185 87 1982 154 3 6 chr10 125534999 125535370 -20053918 - AluJo SINE Alu 0 370 1 360 59 0 0 chr10 125535546 125535597 -20053691 + (TG)n Simple_repeat Simple_repeat 2 52 0 1137 261 71 47 chr10 125536152 125536601 -20052687 - MLT1D LTR MaLR 0 505 46 253 319 65 76 chr10 125536810 125536995 -20052293 + MIR3 SINE MIR 19 201 -7 265 314 23 0 chr10 125537093 125537179 -20052109 + MIR3 SINE MIR 67 154 -54 2173 122 0 0 chr10 125537714 125538008 -20051280 + AluSx SINE Alu 7 300 -12 329 229 138 113 chr10 125538161 125538392 -20050896 + MIR SINE MIR 22 258 -4 310 227 0 0 chr10 125538406 125538472 -20050816 - AluJ/monomer SINE Alu -1 299 234 2943 88 3 3 chr10 125538943 125539307 -20049981 + THE1B LTR MaLR 1 364 0 1723 181 133 24 chr10 125539383 125539803 -20049485 - MLT1C LTR MaLR 0 467 2 2216 98 3 28 chr10 125539897 125540215 -20049073 + AluSg SINE Alu 1 310 0 2148 103 14 3 chr10 125540448 125540738 -20048550 - AluSx SINE Alu -19 293 1 592 313 73 21 chr10 125540742 125540975 -20048313 + L2 LINE L2 3027 3271 -1 2015 137 7 7 chr10 125541192 125541498 -20047790 + AluSx SINE Alu 1 306 -6 1048 186 6 0 chr10 125542200 125542377 -20046911 + MER58A DNA MER1_type 38 215 -9 435 275 194 6 chr10 125542655 125542815 -20046473 + MLT1H LTR MaLR 30 219 -330 2720 165 35 19 chr10 125543035 125543132 -20046156 + L1MC3 LINE L1 7255 7349 -436 180 0 0 0 chr10 125543132 125543152 -20046136 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 2720 165 35 19 chr10 125543152 125543568 -20045720 + L1MC3 LINE L1 7349 7776 -9 1938 154 3 0 chr10 125543569 125543868 -20045420 + AluSq SINE Alu 1 300 -13 2353 74 3 0 chr10 125543874 125544190 -20045098 + AluSp SINE Alu 1 317 0 2052 122 31 0 chr10 125544219 125544507 -20044781 + AluSq SINE Alu 1 297 -16 321 313 46 46 chr10 125545258 125545453 -20043835 - MIR SINE MIR -1 261 67 2247 101 3 3 chr10 125546358 125546654 -20042634 + AluSg SINE Alu 1 296 -14 1919 140 10 20 chr10 125546671 125546971 -20042317 + AluSx SINE Alu 1 297 -15 1935 201 42 16 chr10 125547587 125547971 -20041317 + MSTD LTR MaLR 3 396 0 844 240 16 21 chr10 125548808 125549000 -20040288 - MER63A DNA MER1_type -19 191 1 1701 123 0 4 chr10 125549656 125549899 -20039389 + AluSx SINE Alu 1 242 -70 2343 104 13 0 chr10 125550259 125550567 -20038721 + AluSp SINE Alu 1 312 -1 315 276 127 44 chr10 125550769 125551044 -20038244 + L2 LINE L2 2911 3208 -105 826 135 0 30 chr10 125551543 125551676 -20037612 + FLAM_C SINE Alu 9 137 -6 911 220 23 14 chr10 125552306 125552520 -20036768 - MIR SINE MIR -33 229 14 2365 90 0 19 chr10 125552741 125553052 -20036236 - AluSq SINE Alu -8 305 1 810 129 14 50 chr10 125553325 125553465 -20035823 + FLAM_C SINE Alu 9 143 0 761 254 30 57 chr10 125553770 125553980 -20035308 - Charlie8 DNA MER1_type -66 275 72 2267 105 0 7 chr10 125553980 125554276 -20035012 + AluSx SINE Alu 1 294 -18 761 254 30 57 chr10 125554276 125554329 -20034959 - Charlie8 DNA MER1_type -269 72 19 611 214 136 55 chr10 125554363 125554583 -20034705 + MER112 DNA MER1_type 23 260 0 2296 125 0 0 chr10 125555195 125555507 -20033781 + AluSx SINE Alu 1 312 0 226 230 150 40 chr10 125556005 125556105 -20033183 + MER91C DNA MER1_type 18 128 -12 378 256 73 70 chr10 125556278 125556551 -20032737 + HAL1 LINE L1 1924 2197 -310 514 180 0 55 chr10 125556880 125557008 -20032280 + AluSg/x SINE Alu 74 194 -116 551 138 0 0 chr10 125557171 125557251 -20032037 - MADE1 DNA Mariner 0 80 1 622 300 76 14 chr10 125557679 125557902 -20031386 - MIR SINE MIR -4 258 22 234 303 143 42 chr10 125558347 125558466 -20030822 + MIR SINE MIR 36 145 -63 2229 108 7 0 chr10 125558519 125558816 -20030472 - AluSx SINE Alu -13 299 1 191 100 0 50 chr10 125558837 125558877 -20030411 + (TTTCC)n Simple_repeat Simple_repeat 3 40 0 2042 147 0 0 chr10 125559843 125560136 -20029152 - AluSx SINE Alu -19 293 1 371 330 76 22 chr10 125560140 125560364 -20028924 - MIR SINE MIR -8 254 19 2141 128 0 0 chr10 125561764 125562062 -20027226 + AluSg SINE Alu 1 298 -12 217 216 65 93 chr10 125562488 125562627 -20026661 - MIR SINE MIR -55 153 19 1824 156 3 46 chr10 125562791 125563117 -20026171 - AluJo SINE Alu 0 312 1 565 244 30 0 chr10 125563652 125563783 -20025505 + MIR SINE MIR 57 191 -71 374 316 108 0 chr10 125564041 125564199 -20025089 + MER5A DNA MER1_type 9 183 -6 557 245 49 12 chr10 125564441 125564604 -20024684 - MIR SINE MIR -8 254 86 268 202 55 24 chr10 125564711 125564805 -20024483 - MIR SINE MIR -59 149 61 1270 161 54 92 chr10 125565439 125565617 -20023671 - MLT1B LTR MaLR -85 305 143 2482 108 39 30 chr10 125565617 125565978 -20023310 + THE1B LTR MaLR 1 364 0 1270 161 54 92 chr10 125565978 125566116 -20023172 - MLT1B LTR MaLR -247 143 1 885 290 159 35 chr10 125567226 125568182 -20021106 + HAL1 LINE L1 844 1918 -589 255 206 56 135 chr10 125568605 125568731 -20020557 + HAL1b LINE L1 770 885 -463 726 164 0 0 chr10 125568957 125569073 -20020215 + L1MD1 LINE L1 6023 6138 -104 816 191 0 8 chr10 125569118 125569249 -20020039 - FLAM_C SINE Alu -12 131 2 510 246 21 21 chr10 125569251 125569393 -20019895 - MER105 DNA DNA -58 146 5 3208 223 71 24 chr10 125569400 125569643 -20019645 + L1ME2 LINE L1 4450 4680 -1484 231 36 0 0 chr10 125569643 125569671 -20019617 + (CA)n Simple_repeat Simple_repeat 2 29 0 3208 223 71 24 chr10 125569671 125571047 -20018241 + L1ME2 LINE L1 4680 6154 -10 274 128 21 0 chr10 125571106 125571153 -20018135 + L1MC5 LINE L1 7840 7887 -74 2349 33 47 0 chr10 125571673 125571949 -20017339 - AluY SINE Alu -10 301 13 28 29 0 0 chr10 125572065 125572100 -20017188 + AT_rich Low_complexity Low_complexity 1 35 0 407 282 34 13 chr10 125572606 125572755 -20016533 - MIR SINE MIR -99 163 12 483 69 0 0 chr10 125573383 125573455 -20015833 + (TC)n Simple_repeat Simple_repeat 1 72 0 423 0 0 0 chr10 125573455 125573502 -20015786 + (TA)n Simple_repeat Simple_repeat 1 47 0 205 234 0 62 chr10 125574772 125574836 -20014452 - L2 LINE L2 -2 3270 3211 699 119 30 60 chr10 125576149 125576317 -20012971 - MER3 DNA MER1_type 0 2585 2423 292 224 82 24 chr10 125576298 125576383 -20012905 - MER3 DNA MER1_type -105 104 15 * 2016 133 4 0 chr10 125576419 125576698 -20012590 - AluSx SINE Alu -32 280 1 2182 106 0 10 chr10 125576784 125577107 -20012181 + AluSq SINE Alu 1 313 0 3623 232 60 57 chr10 125578007 125579132 -20010156 + MER69B DNA AcHobo 98 1225 -1 1283 153 9 26 chr10 125579386 125579416 -20009872 + AluJb SINE Alu 84 113 -199 2331 117 45 28 chr10 125579416 125579774 -20009514 - THE1B LTR MaLR 0 364 1 1283 153 9 26 chr10 125579774 125579971 -20009317 + AluJb SINE Alu 113 307 -5 1870 229 62 22 chr10 125580679 125581178 -20008110 - LTR33 LTR ERVL -2 519 1 2321 111 0 0 chr10 125581237 125581543 -20007745 + AluSx SINE Alu 1 306 -6 948 198 6 12 chr10 125582069 125582231 -20007057 + FRAM SINE Alu 1 161 -5 402 266 159 0 chr10 125583396 125583509 -20005779 - MIR3 SINE MIR -33 175 45 213 208 0 21 chr10 125584060 125584108 -20005180 + CT-rich Low_complexity Low_complexity 6 52 0 239 245 0 0 chr10 125584159 125584208 -20005080 + GA-rich Low_complexity Low_complexity 2 50 0 324 0 0 0 chr10 125585576 125585612 -20003676 + (CA)n Simple_repeat Simple_repeat 2 37 0 243 0 0 0 chr10 125586205 125586232 -20003056 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 1090 181 30 10 chr10 125586557 125586756 -20002532 - MER20 DNA MER1_type -1 218 16 1890 141 11 0 chr10 125586798 125587075 -20002213 + AluJb SINE Alu 1 280 -32 245 98 24 0 chr10 125587079 125587120 -20002168 + (GGGGA)n Simple_repeat Simple_repeat 3 44 0 1085 121 6 0 chr10 125587128 125587302 -20001986 + (GGAA)n Simple_repeat Simple_repeat 2 176 0 358 114 29 14 chr10 125587302 125587372 -20001916 + GA-rich Low_complexity Low_complexity 3 73 0 21 0 0 0 chr10 125587977 125587998 -20001290 + AT_rich Low_complexity Low_complexity 1 21 0 317 187 151 50 chr10 125588011 125588150 -20001138 + L1MC4a LINE L1 5878 6030 -1778 194 226 38 19 chr10 125588450 125588503 -20000785 - L2 LINE L2 -12 3260 3207 4861 72 10 0 chr10 125589128 125589740 -19999548 - L1PA10 LINE L1 -61 6107 5490 2166 98 7 20 chr10 125590692 125590989 -19998299 - AluSx SINE Alu -19 293 1 253 186 0 0 chr10 125591029 125591072 -19998216 - MSTA LTR MaLR 0 428 386 1986 105 148 38 chr10 125591349 125591693 -19997595 - MSTA LTR MaLR -46 382 1 256 257 40 14 chr10 125592244 125592318 -19996970 + L2 LINE L2 3197 3272 0 1581 177 99 23 chr10 125592876 125593271 -19996017 + LTR37A LTR ERV1 2 426 0 408 252 89 24 chr10 125593385 125593508 -19995780 + MIR SINE MIR 16 146 -62 270 299 26 39 chr10 125594350 125594504 -19994784 + L1MC/D LINE L1 5574 5725 -2083 252 135 0 0 chr10 125594858 125594895 -19994393 + MADE1 DNA Mariner 1 37 -43 181 56 28 28 chr10 125594898 125594934 -19994354 + (TA)n Simple_repeat Simple_repeat 1 36 0 387 0 0 0 chr10 125594937 125594980 -19994308 + (TG)n Simple_repeat Simple_repeat 2 44 0 1573 183 4 11 chr10 125594981 125595255 -19994033 - AluJb SINE Alu -40 272 1 2373 145 50 40 chr10 125595487 125595764 -19993524 - MSTA LTR MaLR -4 424 140 1689 121 4 4 chr10 125595764 125596013 -19993275 + AluSx SINE Alu 56 304 -8 2373 145 50 40 chr10 125596013 125596155 -19993133 - MSTA LTR MaLR -288 140 1 919 280 99 40 chr10 125596684 125596884 -19992404 + L1ME3A LINE L1 4962 5149 -1021 1367 167 123 15 chr10 125596884 125597153 -19992135 + AluSg SINE Alu 1 298 -12 919 280 99 40 chr10 125597153 125597878 -19991410 + L1ME3A LINE L1 5149 5949 -221 180 77 0 0 chr10 125598180 125598206 -19991082 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 533 257 189 0 chr10 125598251 125598457 -19990831 - MIR SINE MIR -10 252 8 2241 127 0 0 chr10 125599326 125599633 -19989655 + AluSx SINE Alu 1 307 -5 2742 163 27 6 chr10 125599869 125600355 -19988933 - L1MB7 LINE L1 -17 6167 5672 2073 129 0 3 chr10 125600358 125600652 -19988636 - AluSx SINE Alu -19 293 1 255 61 0 0 chr10 125600653 125600686 -19988602 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 621 183 0 50 chr10 125600686 125600806 -19988482 - AluSg/x SINE Alu -26 283 170 254 154 0 0 chr10 125600810 125600849 -19988439 - AluSc SINE Alu -65 234 196 236 179 0 0 chr10 125600847 125600886 -19988402 - Alu SINE Alu -66 234 196 * 1865 87 0 0 chr10 125600886 125601115 -19988173 - AluSx SINE Alu -78 234 6 1537 138 20 8 chr10 125601124 125601377 -19987911 - L1MB7 LINE L1 -516 5668 5413 946 89 0 0 chr10 125601382 125601506 -19987782 - AluSg/x SINE Alu 0 312 189 1502 183 35 11 chr10 125601507 125601881 -19987407 - L1MB7 LINE L1 -743 5403 5039 233 308 55 22 chr10 125602295 125602386 -19986902 - L2 LINE L2 -527 2787 2694 2170 127 3 19 chr10 125603055 125603370 -19985918 - AluSx SINE Alu -2 310 1 361 276 88 75 chr10 125603391 125603685 -19985603 + L2 LINE L2 2607 2904 -410 220 306 41 71 chr10 125604264 125604362 -19984926 - L2 LINE L2 -32 3240 3146 2373 67 0 0 chr10 125604694 125604977 -19984311 - AluSc SINE Alu -26 283 1 1007 118 0 0 chr10 125606116 125606251 -19983037 + AluSq/x SINE Alu 1 135 -178 1534 199 58 0 chr10 125606251 125606543 -19982745 + AluSx SINE Alu 1 309 -3 279 151 116 47 chr10 125607097 125607183 -19982105 + L1MC5 LINE L1 7835 7926 -35 228 158 0 171 chr10 125607180 125607256 -19982032 + L1MB7 LINE L1 6095 6157 -27 * 2012 129 0 4 chr10 125607279 125607558 -19981730 - AluSx SINE Alu -33 279 2 182 216 0 59 chr10 125607610 125607661 -19981627 - MIR SINE MIR -129 133 86 230 158 158 18 chr10 125608611 125608668 -19980620 + HAL1b LINE L1 825 889 -459 1970 143 36 0 chr10 125609971 125610272 -19979016 + AluSx SINE Alu 1 312 0 2570 68 0 0 chr10 125610423 125610734 -19978554 - AluY SINE Alu 0 311 1 256 287 35 0 chr10 125611103 125611190 -19978098 + L1ME LINE L1 5772 5861 -260 631 182 25 50 chr10 125611793 125611856 -19977432 + MIR SINE MIR 102 165 -97 2039 138 20 0 chr10 125611856 125612153 -19977135 + AluSx SINE Alu 1 303 -9 631 182 25 50 chr10 125612153 125612248 -19977040 + MIR SINE MIR 165 256 -6 271 289 12 0 chr10 125613446 125613529 -19975759 + L2 LINE L2 2041 2124 -1190 329 198 99 27 chr10 125613529 125613706 -19975582 - MER5C DNA MER1_type 0 324 96 997 188 0 0 chr10 125613706 125613876 -19975412 + AluJb SINE Alu 134 303 -9 303 297 50 0 chr10 125613881 125613982 -19975306 - MER5C DNA MER1_type -215 109 4 495 298 75 48 chr10 125614024 125614424 -19974864 + L2 LINE L2 2223 2633 -681 183 182 0 0 chr10 125614405 125614438 -19974850 - MIR SINE MIR -228 34 2 * 2141 106 0 3 chr10 125614488 125614771 -19974517 + AluSx SINE Alu 1 282 -30 1771 114 110 0 chr10 125614797 125615060 -19974228 + AluSq SINE Alu 1 292 -21 5261 146 55 41 chr10 125615190 125616290 -19972998 - L1MA7 LINE L1 -11 6280 5163 2230 121 0 0 chr10 125616969 125617267 -19972021 + AluSx SINE Alu 3 300 -12 1892 139 0 49 chr10 125617858 125618182 -19971106 - AluJo SINE Alu -3 309 2 434 18 18 0 chr10 125618651 125618706 -19970582 + (CA)n Simple_repeat Simple_repeat 2 57 0 1052 214 131 60 chr10 125618824 125619379 -19969909 + L2 LINE L2 2724 3310 -3 39 22 0 0 chr10 125620506 125620552 -19968736 + AT_rich Low_complexity Low_complexity 1 46 0 2014 113 4 0 chr10 125620722 125620997 -19968291 + AluSc SINE Alu 32 307 -2 309 303 33 57 chr10 125621427 125621549 -19967739 - MIR SINE MIR -74 134 16 4038 62 2 0 chr10 125621646 125622128 -19967160 - L1PA10 LINE L1 0 6168 5686 516 254 116 0 chr10 125622617 125622806 -19966482 + L1MC4a LINE L1 5678 5888 -1920 183 42 0 0 chr10 125623051 125623075 -19966213 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2144 99 7 20 chr10 125623077 125623370 -19965918 - AluSx SINE Alu -23 289 1 2053 143 21 12 chr10 125624261 125624597 -19964691 + MER1B DNA MER1_type 1 339 0 270 73 0 0 chr10 125625285 125625326 -19963962 + (TG)n Simple_repeat Simple_repeat 2 42 0 252 345 47 8 chr10 125625635 125625870 -19963418 - L1M4 LINE L1 -1502 4644 4401 339 314 33 126 chr10 125625910 125626181 -19963107 + L2 LINE L2 2935 3180 -92 488 233 68 48 chr10 125626475 125626621 -19962667 + MIR SINE MIR 21 169 -93 1633 241 105 27 chr10 125626623 125627410 -19961878 + L2 LINE L2 2314 3150 -163 23 33 0 0 chr10 125628169 125628199 -19961089 + AT_rich Low_complexity Low_complexity 1 30 0 351 0 0 0 chr10 125629625 125629664 -19959624 + (CA)n Simple_repeat Simple_repeat 1 39 0 316 286 42 71 chr10 125630772 125630940 -19958348 + L2 LINE L2 212 374 -2940 221 259 89 80 chr10 125631008 125631120 -19958168 + L2 LINE L2 2941 3053 -219 354 61 0 0 chr10 125631193 125631242 -19958046 + (TC)n Simple_repeat Simple_repeat 1 49 0 2235 90 3 3 chr10 125631256 125631546 -19957742 - AluY SINE Alu -21 290 1 257 361 227 0 chr10 125631564 125631683 -19957605 + L2 LINE L2 3127 3272 0 544 303 26 9 chr10 125631988 125632231 -19957057 - L1MC4a LINE L1 -534 5825 5652 30 27 0 0 chr10 125632542 125632579 -19956709 + AT_rich Low_complexity Low_complexity 1 37 0 1773 120 69 18 chr10 125632622 125632898 -19956390 - AluSg SINE Alu -20 290 1 387 305 28 23 chr10 125632993 125633170 -19956118 + MER5B DNA MER1_type 1 178 0 300 361 0 10 chr10 125633198 125633295 -19955993 - MER5A DNA MER1_type -54 135 40 1772 113 113 7 chr10 125633582 125633856 -19955432 - AluSg SINE Alu -7 303 1 2025 112 61 14 chr10 125634267 125634563 -19954725 - AluSg SINE Alu 0 310 1 710 244 105 13 chr10 125635246 125635484 -19953804 + MIR SINE MIR 3 262 0 22 0 0 0 chr10 125636402 125636424 -19952864 + AT_rich Low_complexity Low_complexity 1 22 0 26 82 0 0 chr10 125637357 125637418 -19951870 + GC_rich Low_complexity Low_complexity 1 61 0 1700 148 25 50 chr10 125638275 125638768 -19950520 + AluSx SINE Alu 1 485 0 878 86 11 53 chr10 125638581 125638775 -19950513 + (GAAA)n Simple_repeat Simple_repeat 2 187 0 547 288 0 0 chr10 125639404 125639529 -19949759 - L2 LINE L2 0 3272 3148 193 390 53 5 chr10 125639542 125639729 -19949559 + L2 LINE L2 2804 2999 -273 2161 115 3 0 chr10 125640021 125640317 -19948971 - AluSx SINE Alu -15 297 1 733 283 57 72 chr10 125641422 125641515 -19947773 + L1MEd LINE L1 560 653 -5478 1886 146 0 20 chr10 125641515 125641809 -19947479 + AluJo SINE Alu 10 297 -15 733 283 57 72 chr10 125641809 125642517 -19946771 + L1MEd LINE L1 653 1240 -4891 2295 117 0 0 chr10 125642627 125642935 -19946353 + AluSx SINE Alu 1 308 -4 204 143 0 0 chr10 125643031 125643073 -19946215 + (TA)n Simple_repeat Simple_repeat 1 42 0 300 209 88 11 chr10 125643193 125643284 -19946004 + L1MEd LINE L1 3179 3276 -2853 1136 290 35 14 chr10 125643334 125643768 -19945520 + L1MEc LINE L1 36 478 -5918 2075 86 62 88 chr10 125644130 125644515 -19944773 - THE1C LTR MaLR 0 375 1 2264 105 0 0 chr10 125645520 125645815 -19943473 + AluSg SINE Alu 1 295 -15 1280 214 41 15 chr10 125645839 125646105 -19943183 - AluJo SINE Alu -39 273 1 799 281 83 33 chr10 125646112 125646743 -19942545 - L1MCc LINE L1 -4888 1535 1254 2011 156 0 0 chr10 125647269 125647570 -19941718 + AluJb SINE Alu 1 301 -11 330 26 0 0 chr10 125647756 125647795 -19941493 + (CA)n Simple_repeat Simple_repeat 2 40 0 667 260 187 5 chr10 125648351 125648570 -19940718 - MIR SINE MIR 0 262 4 689 294 33 52 chr10 125648684 125649140 -19940148 - L1MC4a LINE L1 -128 5993 5556 1357 141 62 30 chr10 125649472 125649908 -19939380 - LTR54 LTR ERV1 0 510 1 2091 148 0 0 chr10 125650399 125650704 -19938584 + AluJb SINE Alu 1 305 -7 593 232 0 12 chr10 125650704 125650868 -19938420 + (TATATG)n Simple_repeat Simple_repeat 5 166 0 1292 330 69 53 chr10 125651594 125652179 -19937109 - L2 LINE L2 -338 2976 2373 2170 103 26 19 chr10 125652179 125652455 -19936833 + AluSx SINE Alu 1 281 -31 207 0 0 0 chr10 125652455 125652478 -19936810 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2170 103 26 19 chr10 125652478 125652511 -19936777 + AluSx SINE Alu 281 312 0 1292 330 69 53 chr10 125652511 125652741 -19936547 - L2 LINE L2 -941 2373 2148 182 349 35 12 chr10 125652776 125652862 -19936426 - L2 LINE L2 -1256 2058 1971 726 204 74 19 chr10 125652866 125653028 -19936260 + MER63A DNA MER1_type 5 175 -35 444 279 122 31 chr10 125653062 125653245 -19936043 - L2 LINE L2 -1348 1966 1801 2205 96 0 0 chr10 125653245 125653556 -19935732 + AluSg SINE Alu 1 311 0 2326 99 3 6 chr10 125653558 125653871 -19935417 + AluSx SINE Alu 1 312 0 444 279 122 31 chr10 125653871 125653912 -19935376 - L2 LINE L2 -1513 1801 1717 188 358 42 21 chr10 125653927 125654022 -19935266 - MIR SINE MIR -147 115 19 25 0 0 0 chr10 125654824 125654849 -19934439 + AT_rich Low_complexity Low_complexity 1 25 0 2286 117 0 0 chr10 125654894 125655203 -19934085 - AluSx SINE Alu -3 309 1 354 265 126 27 chr10 125655306 125655529 -19933759 + L1 LINE L1 4178 4422 -1724 27 49 0 0 chr10 125655644 125655685 -19933603 + AT_rich Low_complexity Low_complexity 1 41 0 7896 21 0 245 chr10 125655873 125657416 -19931872 + SVA Other Other 233 1408 0 190 167 119 0 chr10 125657421 125657463 -19931825 - MIR SINE MIR -167 95 49 2213 108 0 0 chr10 125657495 125657814 -19931474 + AluSx SINE Alu 1 312 0 1043 134 32 16 chr10 125657821 125658007 -19931281 - MER53 DNA DNA 0 189 1 2358 110 0 0 chr10 125658024 125658334 -19930954 + AluSg SINE Alu 1 310 0 404 121 15 0 chr10 125658506 125658572 -19930716 - L1PA14 LINE L1 0 6161 6095 1992 100 46 7 chr10 125658572 125658837 -19930451 - L1P4 LINE L1 -606 5559 5279 2130 122 3 10 chr10 125658837 125659141 -19930147 - AluSx SINE Alu -10 302 1 1992 100 46 7 chr10 125659141 125659205 -19930083 - L1P4 LINE L1 -886 5279 5219 714 236 32 6 chr10 125659541 125659698 -19929590 - MER45A DNA AcHobo -7 171 11 186 43 0 0 chr10 125660115 125660138 -19929150 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 885 166 14 90 chr10 125660141 125660352 -19928936 - AluJo SINE Alu -31 281 87 2569 64 0 0 chr10 125660406 125660717 -19928571 + AluY SINE Alu 1 311 0 661 214 150 41 chr10 125660937 125661088 -19928200 - MIR SINE MIR 0 262 78 1859 173 0 0 chr10 125661088 125661383 -19927905 + AluJb SINE Alu 1 295 -17 661 214 150 41 chr10 125661383 125661451 -19927837 - MIR SINE MIR -184 78 19 818 256 143 14 chr10 125661571 125661864 -19927424 + L2 LINE L2 1990 2320 -994 2897 76 28 28 chr10 125661864 125661919 -19927369 + MSTA LTR MaLR 1 55 -373 2264 117 0 0 chr10 125661919 125662227 -19927061 + AluSx SINE Alu 1 308 -4 2897 76 28 28 chr10 125662227 125662568 -19926720 + MSTA LTR MaLR 54 397 -31 1169 288 19 11 chr10 125662612 125662983 -19926305 + LTR16B LTR ERVL 46 419 -45 765 290 78 25 chr10 125662984 125663492 -19925796 + L2 LINE L2 2628 3313 0 2192 122 0 7 chr10 125664474 125664778 -19924510 + AluSq SINE Alu 1 302 -11 513 224 46 59 chr10 125665102 125665196 -19924092 + MIR3 SINE MIR 23 116 -92 2328 198 97 28 chr10 125665196 125665701 -19923587 - MLT1F LTR MaLR -1 541 2 513 224 46 59 chr10 125665701 125665758 -19923530 + MIR3 SINE MIR 116 172 -36 * 914 334 109 27 chr10 125665752 125666542 -19922746 + L2 LINE L2 455 1309 -2005 572 188 172 0 chr10 125666702 125666830 -19922458 + MER33 DNA MER1_type 1 150 -174 23 0 0 0 chr10 125667157 125667180 -19922108 + AT_rich Low_complexity Low_complexity 1 23 0 2325 95 0 10 chr10 125667188 125667484 -19921804 + AluSx SINE Alu 1 293 -19 1907 140 3 32 chr10 125667499 125667807 -19921481 + AluJo SINE Alu 1 299 -13 2284 91 0 26 chr10 125667839 125668147 -19921141 - AluSc SINE Alu -9 300 1 2121 233 81 48 chr10 125668234 125668829 -19920459 + L2 LINE L2 2073 2696 -618 1755 162 3 17 chr10 125668829 125669125 -19920163 - AluJb SINE Alu -20 292 1 2121 233 81 48 chr10 125669125 125669221 -19920067 + L2 LINE L2 2696 2787 -527 671 261 14 21 chr10 125669253 125669629 -19919659 + MER20B DNA MER1_type 8 475 -308 * 1293 147 0 63 chr10 125669625 125669680 -19919608 - Tigger2a DNA MER2_type -2274 434 377 1966 150 16 3 chr10 125669680 125669986 -19919302 + AluSx SINE Alu 1 310 -2 1293 147 0 63 chr10 125669986 125670182 -19919106 - Tigger2a DNA MER2_type -2331 377 199 821 183 23 0 chr10 125670182 125670313 -19918975 + AluJo SINE Alu 2 135 -177 1232 162 29 5 chr10 125670320 125670524 -19918764 - Tigger2a DNA MER2_type -225 209 1 469 205 86 0 chr10 125670646 125670763 -19918525 + LTR50 LTR ERVL 28 154 -641 485 230 88 36 chr10 125670822 125671033 -19918255 + LTR50 LTR ERVL 296 594 -201 1691 147 49 46 chr10 125671103 125671409 -19917879 - AluSx SINE Alu -5 307 1 414 167 39 13 chr10 125671411 125671489 -19917799 + LTR50 LTR ERVL 713 792 -3 727 205 25 0 chr10 125671842 125671997 -19917291 - FLAM_A SINE Alu 0 158 1 2053 124 10 0 chr10 125672027 125672318 -19916970 + AluSq SINE Alu 1 294 -19 2141 88 0 4 chr10 125672638 125672912 -19916376 + AluY SINE Alu 2 274 -37 1491 18 0 12 chr10 125672912 125673080 -19916208 + L1PA4 LINE L1 5990 6155 0 6428 307 72 41 chr10 125673158 125674943 -19914345 + ERVL LTR ERVL 837 2752 -3012 1977 111 72 4 chr10 125674943 125675222 -19914066 - AluSx SINE Alu -14 298 1 6428 307 72 41 chr10 125675222 125676388 -19912900 + ERVL LTR ERVL 2752 3880 -1884 731 228 26 64 chr10 125676388 125676551 -19912737 + L1MC4 LINE L1 6854 7007 -1035 2112 126 0 28 chr10 125676551 125676868 -19912420 + AluSx SINE Alu 5 312 0 731 228 26 64 chr10 125676868 125676937 -19912351 + L1MC4 LINE L1 7007 7077 -965 1998 219 102 34 chr10 125676954 125677047 -19912241 + L1MC4 LINE L1 7289 7374 -668 1943 151 0 43 chr10 125677047 125677372 -19911916 + AluSq SINE Alu 1 311 -2 1998 219 102 34 chr10 125677372 125677736 -19911552 + L1MC4 LINE L1 7374 7795 -247 1584 229 135 35 chr10 125677736 125678195 -19911093 + MLT1D LTR MaLR 1 505 0 1998 219 102 34 chr10 125678195 125678302 -19910986 + L1MC4 LINE L1 7795 7893 -149 25 65 0 0 chr10 125678327 125678373 -19910915 + AT_rich Low_complexity Low_complexity 1 46 0 715 291 36 62 chr10 125678879 125679072 -19910216 + LTR40a LTR ERVL 181 365 -154 2522 123 25 40 chr10 125679072 125679284 -19910004 - MSTD LTR MaLR 0 396 191 2272 99 3 7 chr10 125679284 125679588 -19909700 - AluSx SINE Alu -9 303 1 2522 123 25 40 chr10 125679588 125679775 -19909513 - MSTD LTR MaLR -205 191 3 715 291 36 62 chr10 125679775 125679887 -19909401 + LTR40a LTR ERVL 365 478 -41 2850 185 83 50 chr10 125680622 125681264 -19908024 - MLT2F LTR ERVL 0 663 1 844 178 7 0 chr10 125681645 125681780 -19907508 + AluJo SINE Alu 1 136 -176 594 171 101 116 chr10 125681787 125681900 -19907388 - ERVL-F LTR ERVL -332 5432 5322 2516 77 3 6 chr10 125681900 125682213 -19907075 - AluSp SINE Alu -1 312 1 594 171 101 116 chr10 125682213 125682298 -19906990 - ERVL-F LTR ERVL -442 5322 5237 383 218 50 80 chr10 125682330 125682592 -19906696 + L1M4 LINE L1 2384 2637 -3509 389 61 41 184 chr10 125682617 125682663 -19906625 + L1ME3A LINE L1 5892 5919 -251 2014 140 0 0 chr10 125682663 125682979 -19906309 + AluSx SINE Alu 1 316 0 389 61 41 184 chr10 125682979 125683029 -19906259 + L1ME3A LINE L1 5919 5975 -195 24 32 0 0 chr10 125683056 125683087 -19906201 + AT_rich Low_complexity Low_complexity 1 31 0 1069 97 0 0 chr10 125683088 125683222 -19906066 + AluSq/x SINE Alu 1 134 -179 747 208 24 6 chr10 125683237 125683405 -19905883 + L1ME3A LINE L1 5963 6133 -37 867 278 142 23 chr10 125683474 125683862 -19905426 + L2 LINE L2 2804 3237 -76 725 309 73 15 chr10 125683890 125684480 -19904808 - L1M4 LINE L1 -3381 2765 2142 955 92 8 38 chr10 125684514 125684645 -19904643 - FLAM_C SINE Alu -5 128 2 743 243 120 70 chr10 125684749 125685149 -19904139 + MLT1J LTR MaLR 69 488 -23 2257 128 0 0 chr10 125685583 125685887 -19903401 + AluSg SINE Alu 7 310 0 2447 78 0 0 chr10 125686398 125686704 -19902584 + AluY SINE Alu 1 306 -5 1628 139 46 14 chr10 125687230 125687510 -19901778 - MER2 DNA MER2_type -55 290 2 723 226 98 47 chr10 125687511 125687745 -19901543 - HAL1 LINE L1 -2261 246 1 570 137 0 11 chr10 125687786 125687881 -19901407 - L1PA13 LINE L1 0 6163 6070 1613 88 10 13 chr10 125687881 125688174 -19901114 + L1P4 LINE L1 5197 5489 -679 719 250 142 0 chr10 125689170 125689374 -19899914 - MIR SINE MIR -25 237 5 558 215 0 0 chr10 125689423 125689553 -19899735 + (TG)n Simple_repeat Simple_repeat 2 131 0 2129 80 3 86 chr10 125689554 125689879 -19899409 - AluSq SINE Alu -13 300 3 32 26 0 0 chr10 125690258 125690297 -19898991 + AT_rich Low_complexity Low_complexity 1 39 0 327 303 94 81 chr10 125690652 125691294 -19897994 + L1M2 LINE L1 443 1100 -5749 25 65 0 0 chr10 125691312 125691358 -19897930 + GC_rich Low_complexity Low_complexity 1 46 0 2118 94 3 14 chr10 125692537 125692852 -19896436 - AluSx SINE Alu 0 312 1 245 235 25 49 chr10 125692931 125693012 -19896276 - MER2 DNA MER2_type 0 345 267 740 152 63 32 chr10 125693095 125693253 -19896035 - MER2 DNA MER2_type -172 173 11 1538 171 27 44 chr10 125694088 125694381 -19894907 - AluJb SINE Alu -24 288 1 764 260 55 9 chr10 125695363 125695582 -19893706 + MIR SINE MIR 34 262 0 2285 105 0 0 chr10 125695769 125696064 -19893224 + AluSq SINE Alu 4 298 -15 423 285 26 26 chr10 125696364 125696515 -19892773 - L2 LINE L2 0 3313 3163 2651 40 0 0 chr10 125696570 125696870 -19892418 + AluY SINE Alu 1 300 -11 1107 145 0 5 chr10 125698184 125698370 -19890918 - MER41B LTR ERV1 -111 524 340 * 2395 132 5 36 chr10 125698366 125698805 -19890483 - MER41B LTR ERV1 -210 425 1 2223 116 3 0 chr10 125699325 125699626 -19889662 - AluSx SINE Alu -10 302 1 1152 286 53 43 chr10 125700129 125700566 -19888722 - L2 LINE L2 -2 3311 2871 584 249 171 23 chr10 125700715 125700932 -19888356 - MIR SINE MIR -10 252 4 33 43 0 0 chr10 125701280 125701327 -19887961 + AT_rich Low_complexity Low_complexity 1 47 0 26 0 0 0 chr10 125701615 125701641 -19887647 + AT_rich Low_complexity Low_complexity 1 26 0 2120 123 0 7 chr10 125701765 125702067 -19887221 - AluSx SINE Alu -12 300 1 248 310 141 33 chr10 125702975 125703159 -19886129 + MIR3 SINE MIR 2 205 -3 1012 219 0 0 chr10 125703850 125704042 -19885246 - MER8 DNA MER2_type 0 239 48 21 0 0 0 chr10 125704747 125704768 -19884520 + AT_rich Low_complexity Low_complexity 1 21 0 1882 166 3 10 chr10 125705944 125706257 -19883031 - AluJb SINE Alu -1 311 1 2072 136 0 0 chr10 125706286 125706581 -19882707 + AluSx SINE Alu 1 295 -17 2241 219 89 6 chr10 125706605 125707243 -19882045 - L1ME1 LINE L1 -1 6165 5475 320 336 75 41 chr10 125708010 125708156 -19881132 + L2 LINE L2 3122 3272 0 2175 124 10 0 chr10 125708174 125708480 -19880808 - AluSx SINE Alu -3 309 1 2313 102 0 13 chr10 125708650 125708964 -19880324 + AluY SINE Alu 1 310 -1 240 326 5 153 chr10 125708964 125709160 -19880128 - L2 LINE L2 -91 3181 3015 983 142 0 0 chr10 125709160 125709294 -19879994 + AluJo SINE Alu 1 134 -178 382 358 114 41 chr10 125709409 125709968 -19879320 - L2 LINE L2 -488 2826 2227 466 303 53 13 chr10 125710060 125710212 -19879076 - MER5A DNA MER1_type -31 158 1 2270 89 27 0 chr10 125710346 125710638 -19878650 - AluSx SINE Alu -12 300 1 1777 148 7 35 chr10 125711108 125711418 -19877870 - AluJb SINE Alu -11 301 1 2240 95 6 19 chr10 125712341 125712657 -19876631 - AluSx SINE Alu 0 312 1 2048 114 0 78 chr10 125713830 125714164 -19875124 - AluSx SINE Alu -4 308 1 21 0 0 0 chr10 125715024 125715045 -19874243 + AT_rich Low_complexity Low_complexity 1 21 0 1981 106 0 14 chr10 125716326 125716608 -19872680 - AluSx SINE Alu 0 312 35 1141 103 0 7 chr10 125716804 125716959 -19872329 - AluSg/x SINE Alu -16 294 141 309 133 0 0 chr10 125716960 125717005 -19872283 - Alu SINE Alu -251 51 7 2285 78 51 0 chr10 125717914 125718208 -19871080 + AluSx SINE Alu 1 309 -3 3986 188 51 33 chr10 125718661 125719477 -19869811 - L1MB5 LINE L1 -8 6166 5366 1741 171 34 14 chr10 125719477 125719769 -19869519 + AluJo SINE Alu 1 298 -14 3986 188 51 33 chr10 125719769 125719948 -19869340 - L1MB5 LINE L1 -808 5366 5192 201 39 0 0 chr10 125719948 125719974 -19869314 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 2079 133 0 0 chr10 125719981 125720267 -19869021 - AluSx SINE Alu -26 286 1 3986 188 51 33 chr10 125720267 125721119 -19868169 - L1MB5 LINE L1 -987 5187 4274 320 385 29 32 chr10 125721384 125721724 -19867564 + L2 LINE L2 2308 2646 -668 1263 89 0 0 chr10 125722770 125722928 -19866360 + AluSx SINE Alu 1 158 -154 1500 134 48 51 chr10 125723166 125723264 -19866024 - MER5C DNA MER1_type -12 312 215 2362 95 3 0 chr10 125723264 125723560 -19865728 + AluSp SINE Alu 1 297 -16 1500 134 48 51 chr10 125723560 125723774 -19865514 - MER5C DNA MER1_type -109 215 1 1069 131 0 29 chr10 125726013 125726188 -19863100 + FAM SINE Alu 1 49 0 2212 121 3 0 chr10 125726333 125726663 -19862625 - AluSx SINE Alu 0 331 1 21 57 0 0 chr10 125727618 125727653 -19861635 + AT_rich Low_complexity Low_complexity 1 35 0 1494 136 31 31 chr10 125727781 125728075 -19861213 + L1MA4 LINE L1 6002 6295 -5 2357 87 3 0 chr10 125729406 125729705 -19859583 - AluSp SINE Alu -13 300 1 23 68 0 0 chr10 125730083 125730127 -19859161 + AT_rich Low_complexity Low_complexity 1 44 0 23 92 0 0 chr10 125731166 125731231 -19858057 + AT_rich Low_complexity Low_complexity 1 65 0 192 77 0 0 chr10 125733160 125733186 -19856102 + (TA)n Simple_repeat Simple_repeat 1 26 0 2303 108 0 0 chr10 125734046 125734341 -19854947 - AluSx SINE Alu -17 295 1 3131 71 38 2 chr10 125735021 125735444 -19853844 - L1PA10 LINE L1 0 6168 5731 239 313 60 0 chr10 125735628 125735695 -19853593 - L2 LINE L2 -1 3312 3242 2356 100 0 0 chr10 125735981 125736280 -19853008 + AluSx SINE Alu 2 300 -12 1256 117 92 0 chr10 125736995 125737191 -19852097 - AluJo SINE Alu -12 300 87 2018 120 55 19 chr10 125737229 125737554 -19851734 + MER1B DNA MER1_type 1 337 0 24 0 0 0 chr10 125737617 125737641 -19851647 + AT_rich Low_complexity Low_complexity 1 24 0 28 0 0 0 chr10 125739424 125739452 -19849836 + AT_rich Low_complexity Low_complexity 1 28 0 244 264 172 0 chr10 125739907 125739994 -19849294 + LTR33A LTR ERVL 59 160 -363 370 177 31 8 chr10 125740073 125740203 -19849085 + (TA)n Simple_repeat Simple_repeat 2 134 0 957 171 0 24 chr10 125740217 125740387 -19848901 - AluJo SINE Alu -27 285 120 525 241 71 30 chr10 125740405 125740699 -19848589 + LTR50 LTR ERVL 252 512 -11 825 342 58 14 chr10 125740702 125741266 -19848022 - ERVL LTR ERVL -4290 1474 886 302 263 90 38 chr10 125741320 125741453 -19847835 - ERVL LTR ERVL -5111 653 514 545 265 88 8 chr10 125741947 125742202 -19847086 - LTR50 LTR ERVL 0 673 292 3640 172 36 40 chr10 125742208 125742952 -19846336 - L1MC3 LINE L1 -280 7505 6765 2273 95 0 3 chr10 125743553 125743857 -19845431 - AluSq SINE Alu -10 303 1 1847 152 7 7 chr10 125744465 125744890 -19844398 + AluSx SINE Alu 1 425 0 458 122 43 17 chr10 125744775 125745075 -19844213 + GA-rich Low_complexity Low_complexity 1 303 0 503 278 23 0 chr10 125745440 125745573 -19843715 + MIR SINE MIR 57 192 -70 184 343 71 30 chr10 125745651 125745750 -19843538 + MER5A DNA MER1_type 73 175 -14 29 0 0 0 chr10 125746511 125746540 -19842748 + AT_rich Low_complexity Low_complexity 1 29 0 430 270 26 26 chr10 125746541 125746693 -19842595 + MER5B DNA MER1_type 8 159 -19 248 293 49 16 chr10 125747195 125747318 -19841970 - L1ME LINE L1 -214 5907 5781 2354 94 13 3 chr10 125747554 125747863 -19841425 + AluSx SINE Alu 1 312 0 357 252 185 22 chr10 125748101 125748236 -19841052 - MIR SINE MIR -64 198 42 719 223 170 42 chr10 125748750 125749015 -19840273 - AluJb SINE Alu -2 300 2 1470 181 14 18 chr10 125749167 125749448 -19839840 + L1MB8 LINE L1 5898 6177 -1 1990 120 3 3 chr10 125749455 125749738 -19839550 + AluSx SINE Alu 1 283 -29 279 0 0 0 chr10 125749738 125749769 -19839519 + (CA)n Simple_repeat Simple_repeat 2 32 0 222 267 108 33 chr10 125749769 125749889 -19839399 - MER5A DNA MER1_type -58 131 3 285 304 12 42 chr10 125750462 125750608 -19838680 - MIR SINE MIR -67 141 44 267 203 0 0 chr10 125750976 125751040 -19838248 + (TG)n Simple_repeat Simple_repeat 1 64 0 2101 113 0 7 chr10 125751678 125751961 -19837327 + AluSx SINE Alu 31 311 -1 2072 120 11 3 chr10 125752626 125752937 -19836351 - AluSx SINE Alu 0 313 1 357 306 155 5 chr10 125753430 125753623 -19835665 + MIR SINE MIR 32 253 -9 2335 84 7 3 chr10 125753688 125753984 -19835304 + AluSx SINE Alu 1 297 -15 202 319 14 29 chr10 125753987 125754056 -19835232 + MIR SINE MIR 195 262 0 2267 123 0 0 chr10 125754170 125754480 -19834808 + AluSq SINE Alu 1 310 -3 825 262 19 5 chr10 125755178 125755392 -19833896 - MIR SINE MIR -21 241 25 24 0 0 0 chr10 125755423 125755447 -19833841 + AT_rich Low_complexity Low_complexity 1 24 0 2104 110 40 10 chr10 125755591 125755890 -19833398 - AluSx SINE Alu -4 308 1 420 214 0 11 chr10 125755910 125755999 -19833289 - AluYa5 SINE Alu -106 205 118 240 314 29 36 chr10 125755999 125756136 -19833152 - MIR3 SINE MIR -72 136 1 844 263 45 0 chr10 125756433 125756657 -19832631 - MIR SINE MIR -27 235 2 881 273 74 19 chr10 125756990 125757301 -19831987 + LTR33 LTR ERVL 100 427 -94 265 343 88 47 chr10 125757342 125757639 -19831649 - L2 LINE L2 -160 3112 2804 2238 128 0 0 chr10 125757648 125757960 -19831328 - AluSx SINE Alu 0 312 1 857 303 44 26 chr10 125758592 125759044 -19830244 - HERV16 LTR ERVL -3510 1486 1027 2250 116 3 0 chr10 125759084 125759385 -19829903 - AluSq SINE Alu -11 302 1 290 151 25 57 chr10 125759479 125759638 -19829650 + (TA)n Simple_repeat Simple_repeat 1 154 0 317 135 24 88 chr10 125759652 125759822 -19829466 + (TA)n Simple_repeat Simple_repeat 2 160 0 799 204 82 53 chr10 125759822 125759970 -19829318 + L1MC5 LINE L1 7574 7716 -245 1584 157 32 29 chr10 125759970 125760277 -19829011 + AluJo SINE Alu 1 308 0 219 69 0 0 chr10 125760277 125760306 -19828982 + (TA)n Simple_repeat Simple_repeat 2 30 0 799 204 82 53 chr10 125760306 125760472 -19828816 + L1MC5 LINE L1 7715 7900 -61 504 117 0 0 chr10 125760595 125760672 -19828616 + (TG)n Simple_repeat Simple_repeat 2 78 0 2122 123 3 0 chr10 125760681 125760973 -19828315 - AluSx SINE Alu -19 293 1 284 270 38 43 chr10 125761237 125761422 -19827866 + L1ME4a LINE L1 5543 5726 -395 1904 116 32 0 chr10 125761422 125761748 -19827540 + AluSx SINE Alu 1 335 0 273 276 96 55 chr10 125761778 125762144 -19827144 + L1ME4a LINE L1 5739 6119 -2 583 255 37 6 chr10 125762151 125762312 -19826976 + L1ME4a LINE L1 5618 5783 -338 314 114 0 0 chr10 125762690 125762734 -19826554 + MER110A LTR ERV1 423 466 -2 230 148 19 0 chr10 125762743 125762797 -19826491 + (TG)n Simple_repeat Simple_repeat 2 56 0 320 218 30 68 chr10 125762824 125762957 -19826331 + L1ME4a LINE L1 5783 5910 -211 514 209 97 0 chr10 125762968 125763102 -19826186 + L1ME4a LINE L1 5967 6113 -8 1918 125 0 34 chr10 125763334 125763629 -19825659 + AluJb SINE Alu 1 285 -27 195 297 99 20 chr10 125764338 125764439 -19824849 + L2 LINE L2 1395 1503 -1811 310 325 43 31 chr10 125764621 125764784 -19824504 - MIR SINE MIR -51 211 47 302 366 8 8 chr10 125764839 125764975 -19824313 + MIR SINE MIR 15 149 -67 323 114 14 57 chr10 125764976 125765046 -19824242 + LTR41 LTR ERVL 1 67 -706 1422 259 57 82 chr10 125765053 125765482 -19823806 + ERVL LTR ERVL 4955 5393 -371 2031 289 143 54 chr10 125765482 125766092 -19823196 + MER4A LTR ERV1 1 664 0 1422 259 57 82 chr10 125766092 125766131 -19823157 + ERVL LTR ERVL 5393 5431 -333 4854 52 19 7 chr10 125766131 125766711 -19822577 + LTR10C LTR ERV1 1 587 -4 1422 259 57 82 chr10 125766711 125766855 -19822433 + ERVL LTR ERVL 5431 5577 -187 1725 169 24 0 chr10 125766855 125767145 -19822143 + AluJb SINE Alu 1 297 -15 1422 259 57 82 chr10 125767145 125767352 -19821936 + ERVL LTR ERVL 5577 5756 -8 492 283 51 17 chr10 125767353 125767530 -19821758 + LTR41 LTR ERVL 2 184 -589 335 172 8 127 chr10 125767820 125767954 -19821334 + LTR41 LTR ERVL 650 767 -6 252 241 0 17 chr10 125767981 125768039 -19821249 + MIR SINE MIR 160 216 -46 300 250 52 26 chr10 125768236 125768465 -19820823 + MLT1H LTR MaLR 238 557 -10 796 272 87 18 chr10 125768517 125768793 -19820495 - MLT1K LTR MaLR -2 586 292 336 304 161 24 chr10 125768824 125768992 -19820296 - MLT1K LTR MaLR -356 232 42 732 295 134 9 chr10 125769349 125769678 -19819610 + MLT1K LTR MaLR 109 478 -110 1997 199 150 5 chr10 125770696 125771137 -19818151 - MLT1D LTR MaLR 0 505 1 189 0 0 0 chr10 125771146 125771167 -19818121 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 197 156 0 47 chr10 125772118 125772182 -19817106 + T-rich Low_complexity Low_complexity 1 61 0 2052 145 0 16 chr10 125772649 125772966 -19816322 + AluJb SINE Alu 1 312 0 25 0 0 0 chr10 125773494 125773519 -19815769 + AT_rich Low_complexity Low_complexity 1 25 0 501 295 55 76 chr10 125773669 125773909 -19815379 + L2 LINE L2 2842 3073 -240 2785 134 16 12 chr10 125773909 125774333 -19814955 - MSTB LTR MaLR 0 426 1 501 295 55 76 chr10 125774333 125774472 -19814816 + L2 LINE L2 3073 3213 -100 190 139 0 0 chr10 125774566 125774602 -19814686 + L2 LINE L2 3277 3312 -1 1834 214 82 25 chr10 125776676 125777116 -19812172 + MLT1C LTR MaLR 3 467 0 948 131 7 4 chr10 125777270 125777535 -19811753 - MLT1A1 LTR MaLR 0 365 1 2281 107 0 0 chr10 125777653 125777951 -19811337 + AluSq SINE Alu 1 298 -15 1097 297 125 19 chr10 125778235 125779086 -19810202 + L2 LINE L2 2369 3313 0 2157 132 0 3 chr10 125779498 125779809 -19809479 - AluSg SINE Alu 0 310 1 1921 145 3 17 chr10 125779890 125780186 -19809102 - AluSx SINE Alu -20 292 1 673 185 252 0 chr10 125780365 125780516 -19808772 + MER5A DNA MER1_type 1 189 0 351 265 51 17 chr10 125781006 125781123 -19808165 - MIR SINE MIR -65 143 23 287 260 93 47 chr10 125781213 125781245 -19808043 + MER91A DNA MER1_type 3 32 -164 3343 149 20 13 chr10 125781245 125781783 -19807505 + MER34 LTR ERV1 1 542 0 287 260 93 47 chr10 125781783 125781900 -19807388 + MER91A DNA MER1_type 32 159 -37 279 324 0 0 chr10 125781883 125781954 -19807334 + MER5B DNA MER1_type 39 109 -69 * 183 80 0 0 chr10 125781974 125781999 -19807289 + (TG)n Simple_repeat Simple_repeat 2 26 0 218 0 94 0 chr10 125782025 125782057 -19807231 + T-rich Low_complexity Low_complexity 1 35 0 1651 121 15 59 chr10 125782064 125782200 -19807088 - AluSq SINE Alu -53 260 140 2149 101 42 23 chr10 125782200 125782506 -19806782 - AluSx SINE Alu 0 312 1 1651 121 15 59 chr10 125782506 125782641 -19806647 - AluSq SINE Alu -173 140 1 1093 154 19 0 chr10 125782650 125782812 -19806476 - FAM SINE Alu -10 165 1 343 161 0 0 chr10 125782823 125782879 -19806409 + MER5B DNA MER1_type 123 178 0 938 176 57 0 chr10 125785089 125785265 -19804023 - MER20 DNA MER1_type 0 219 34 195 364 15 15 chr10 125785770 125785836 -19803452 + MIR SINE MIR 2 67 -195 1382 153 8 25 chr10 125785953 125786189 -19803099 - LTR18B LTR ERVL -382 232 1 329 309 46 46 chr10 125786292 125786444 -19802844 - MLT1J LTR MaLR -148 363 212 21 0 0 0 chr10 125787294 125787315 -19801973 + AT_rich Low_complexity Low_complexity 1 21 0 515 275 185 22 chr10 125787669 125788146 -19801142 + MLT1L LTR MaLR 39 610 -5 541 256 173 94 chr10 125788163 125788621 -19800667 + MLT1J LTR MaLR 12 505 -6 405 0 0 0 chr10 125788977 125789022 -19800266 + (TG)n Simple_repeat Simple_repeat 2 46 0 2250 126 0 0 chr10 125789276 125789585 -19799703 + AluSg SINE Alu 1 309 -1 273 269 62 39 chr10 125789819 125789949 -19799339 - MER5B DNA MER1_type -41 137 5 2254 86 3 10 chr10 125790190 125790482 -19798806 + AluSq SINE Alu 1 290 -23 232 30 0 0 chr10 125790737 125790770 -19798518 + L1MA5 LINE L1 6092 6124 -176 304 141 0 31 chr10 125790781 125790893 -19798395 + L1MA5 LINE L1 6237 6346 0 2083 135 3 0 chr10 125792384 125792680 -19796608 - AluSx SINE Alu -7 305 9 248 269 15 0 chr10 125793164 125793231 -19796057 + T-rich Low_complexity Low_complexity 3 70 0 551 315 123 0 chr10 125793372 125793575 -19795713 - MIR SINE MIR -12 250 23 791 236 95 46 chr10 125793766 125793941 -19795347 + MER5C DNA MER1_type 4 202 -122 1679 178 0 41 chr10 125793941 125794256 -19795032 - AluJb SINE Alu -10 302 1 791 236 95 46 chr10 125794256 125794385 -19794903 + MER5C DNA MER1_type 202 323 -1 2036 133 0 3 chr10 125795889 125796205 -19793083 - MER47A DNA MER2_type 0 366 52 219 36 0 0 chr10 125796226 125796254 -19793034 + (TA)n Simple_repeat Simple_repeat 2 29 0 241 61 0 0 chr10 125796397 125796430 -19792858 - MLT2A1 LTR ERVL -411 33 1 544 214 65 83 chr10 125796454 125796479 -19792809 - L2 LINE L2 0 3313 3289 2188 93 3 21 chr10 125796479 125796797 -19792491 + AluSq SINE Alu 1 313 0 544 214 65 83 chr10 125796797 125796938 -19792350 - L2 LINE L2 -24 3289 3149 2068 150 33 11 chr10 125796939 125797305 -19791983 - MSTB LTR MaLR -1 425 52 771 139 0 0 chr10 125797303 125797425 -19791863 - MSTB LTR MaLR -300 126 5 * 196 252 44 118 chr10 125797429 125797564 -19791724 - L2 LINE L2 -159 3154 3030 2422 92 3 0 chr10 125797669 125797975 -19791313 + AluSp SINE Alu 1 307 -6 300 325 32 0 chr10 125799747 125799870 -19789418 - L1ME4a LINE L1 -214 5907 5781 2447 82 0 3 chr10 125800106 125800412 -19788876 + AluSq SINE Alu 1 305 -8 3557 153 23 9 chr10 125800413 125801252 -19788036 + L1M2 LINE L1 4636 5484 -744 725 97 0 0 chr10 125801256 125801349 -19787939 + AluS SINE Alu 7 99 -213 985 177 0 15 chr10 125801351 125801460 -19787828 + L1M2 LINE L1 5380 5489 -811 2072 120 4 0 chr10 125801460 125801735 -19787553 + AluSx SINE Alu 7 282 -30 194 0 39 0 chr10 125801743 125801769 -19787519 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 985 177 0 15 chr10 125801769 125801853 -19787435 + L1M2 LINE L1 5496 5579 -721 894 125 13 0 chr10 125801850 125802002 -19787286 - L1 LINE L1 -1138 5008 4855 * 983 145 0 6 chr10 125802005 125802171 -19787117 + L1M2 LINE L1 5587 5751 -549 24 32 0 0 chr10 125802518 125802549 -19786739 + GC_rich Low_complexity Low_complexity 1 31 0 333 348 15 22 chr10 125804415 125804550 -19784738 - MIR3 SINE MIR -18 190 57 1958 117 46 39 chr10 125804831 125805138 -19784150 - AluSx SINE Alu -3 309 1 2323 72 3 7 chr10 125805149 125805442 -19783846 - AluSp SINE Alu -21 292 1 1755 72 0 5 chr10 125805548 125805770 -19783518 - AluY SINE Alu -8 303 83 4568 228 35 23 chr10 125805862 125806990 -19782298 + MSTC-int LTR MaLR 594 1735 0 294 209 90 0 chr10 125806992 125807059 -19782229 + MSTC LTR MaLR 3 75 -353 1999 113 46 3 chr10 125807223 125807549 -19781739 + L1PA16 LINE L1 5825 6164 -2 2490 76 0 3 chr10 125807621 125807925 -19781363 - AluSp SINE Alu -10 303 1 2289 102 0 3 chr10 125808320 125808614 -19780674 - AluSq SINE Alu -20 293 1 551 174 113 9 chr10 125809588 125809703 -19779585 + AluSc SINE Alu 107 233 -76 2456 89 0 0 chr10 125809848 125810151 -19779137 + AluSx SINE Alu 1 303 -9 338 248 184 14 chr10 125810241 125810382 -19778906 - L2 LINE L2 -3 3310 3146 1760 141 35 3 chr10 125810510 125810800 -19778488 + AluJb SINE Alu 1 299 -13 211 167 125 125 chr10 125811010 125811106 -19778182 - MER5C DNA MER1_type -3 321 226 201 200 95 42 chr10 125811113 125811208 -19778080 - MER5C DNA MER1_type -200 124 25 1935 133 3 20 chr10 125811228 125811521 -19777767 + AluSx SINE Alu 1 288 -24 465 66 0 0 chr10 125811530 125811591 -19777697 + (TAGG)n Simple_repeat Simple_repeat 2 62 0 231 36 0 0 chr10 125811603 125811631 -19777657 + (ATTG)n Simple_repeat Simple_repeat 2 29 0 308 215 141 33 chr10 125811932 125812053 -19777235 + L1ME4a LINE L1 5986 6119 -2 24 85 0 0 chr10 125812501 125812560 -19776728 + AT_rich Low_complexity Low_complexity 1 59 0 190 212 0 0 chr10 125812560 125812593 -19776695 - MIR3 SINE MIR -23 185 153 383 256 37 43 chr10 125812594 125812704 -19776584 + MER112 DNA MER1_type 2 112 -148 1957 154 136 5 chr10 125812704 125813080 -19776208 - MSTB LTR MaLR 0 426 2 383 256 37 43 chr10 125813080 125813133 -19776155 + MER112 DNA MER1_type 112 164 -96 185 274 32 0 chr10 125813773 125813835 -19775453 + MIR SINE MIR 199 262 0 816 225 116 25 chr10 125814316 125814592 -19774696 + L1ME3A LINE L1 5842 6142 -28 2212 114 0 25 chr10 125814715 125815032 -19774256 + AluSx SINE Alu 1 309 -3 427 262 146 4 chr10 125815062 125815295 -19773993 + L1MEd LINE L1 964 1229 -4890 378 396 0 7 chr10 125815340 125815489 -19773799 - MIR3 SINE MIR -6 202 55 239 311 50 0 chr10 125816886 125817005 -19772283 + L1ME LINE L1 5536 5660 -461 223 302 246 16 chr10 125819541 125819667 -19769621 - MIR SINE MIR -71 191 37 207 0 0 0 chr10 125820553 125820576 -19768712 + (CCAA)n Simple_repeat Simple_repeat 1 23 0 23 68 0 0 chr10 125822821 125822865 -19766423 + AT_rich Low_complexity Low_complexity 1 44 0 1696 165 47 15 chr10 125823131 125823471 -19765817 + MLT1A1 LTR MaLR 4 354 -11 379 109 0 0 chr10 125824910 125824965 -19764323 + U6 snRNA snRNA 52 106 -1 2158 126 3 3 chr10 125824966 125825276 -19764012 - AluSx SINE Alu -2 310 1 21 0 0 0 chr10 125825283 125825304 -19763984 + AT_rich Low_complexity Low_complexity 1 21 0 299 289 13 0 chr10 125826459 125826535 -19762753 - L3 LINE CR1 -3 1574 1498 520 319 148 16 chr10 125827016 125827523 -19761765 + L1ME3 LINE L1 49 622 -5774 2083 200 101 30 chr10 125827560 125828271 -19761017 + L1M4 LINE L1 4238 4999 -1147 349 250 66 20 chr10 125828278 125828430 -19760858 + L1MA10 LINE L1 6175 6333 -1 1166 259 101 23 chr10 125828548 125829193 -19760095 + L1ME3 LINE L1 3395 4089 -2126 2470 74 3 16 chr10 125829197 125829509 -19759779 + AluY SINE Alu 1 308 -3 321 294 34 8 chr10 125829514 125829633 -19759655 + L1ME3 LINE L1 4765 4886 -1329 565 246 62 31 chr10 125829757 125830017 -19759271 + L1ME3 LINE L1 5080 5347 -868 1413 205 104 123 chr10 125830052 125830889 -19758399 + L1ME3 LINE L1 5339 6141 -90 544 271 115 92 chr10 125830939 125831540 -19757748 - L1M2 LINE L1 -5788 1061 447 495 281 6 36 chr10 125832374 125832541 -19756747 - MER20B DNA MER1_type -559 224 63 1320 144 0 0 chr10 125832837 125833025 -19756263 + AluSg/x SINE Alu 69 256 -56 633 220 87 23 chr10 125833031 125833249 -19756039 + MER20B DNA MER1_type 546 777 -6 372 318 61 57 chr10 125833676 125833956 -19755332 + L2 LINE L2 2396 2676 -638 * 521 286 40 29 chr10 125833943 125834118 -19755170 - MIR SINE MIR -72 190 14 24 0 0 0 chr10 125834364 125834388 -19754900 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr10 125835810 125835832 -19753456 + AT_rich Low_complexity Low_complexity 1 22 0 2122 66 11 25 chr10 125835966 125836277 -19753011 - AluSq SINE Alu 0 307 1 2536 69 0 0 chr10 125836701 125837007 -19752281 + AluY SINE Alu 1 306 -5 1817 164 0 30 chr10 125837142 125837447 -19751841 + AluJb SINE Alu 1 296 -16 2371 88 3 0 chr10 125838364 125838669 -19750619 + AluSp SINE Alu 1 306 -7 183 80 0 0 chr10 125838942 125838967 -19750321 + (A)n Simple_repeat Simple_repeat 1 25 0 189 350 82 10 chr10 125839390 125839487 -19749801 + L2 LINE L2 3149 3252 -20 334 332 11 26 chr10 125839633 125839823 -19749465 + MER5A DNA MER1_type 2 188 -1 292 295 116 11 chr10 125840839 125840934 -19748354 + L2 LINE L2 3195 3299 -14 2423 92 3 0 chr10 125842365 125842671 -19746617 - AluSp SINE Alu -6 307 1 183 259 44 118 chr10 125842776 125842911 -19746377 + L2 LINE L2 3030 3154 -159 813 148 0 0 chr10 125842915 125843037 -19746251 + MSTB LTR MaLR 5 126 -300 497 146 0 22 chr10 125843021 125843110 -19746178 + MSTA LTR MaLR 41 127 -301 * 471 157 0 22 chr10 125843094 125843183 -19746105 + MSTA LTR MaLR 41 127 -301 * 471 157 0 22 chr10 125843167 125843256 -19746032 + MSTA LTR MaLR 41 127 -301 445 169 0 22 chr10 125843240 125843329 -19745959 + MSTA LTR MaLR 41 127 -301 * 445 169 0 22 chr10 125843313 125843402 -19745886 + MSTB LTR MaLR 41 127 -301 420 183 42 21 chr10 125843386 125843487 -19745801 + MSTA LTR MaLR 41 151 -214 * 1942 157 39 12 chr10 125843509 125843840 -19745448 + MSTB LTR MaLR 86 425 -1 531 214 65 83 chr10 125843841 125843982 -19745306 + L2 LINE L2 3149 3289 -24 2231 92 0 20 chr10 125843982 125844301 -19744987 - AluSq SINE Alu 0 313 1 531 214 65 83 chr10 125844301 125844326 -19744962 + L2 LINE L2 3289 3313 0 1943 180 48 27 chr10 125844350 125844888 -19744400 + MLT2A2 LTR ERVL 1 554 0 192 209 164 0 chr10 125844986 125845053 -19744235 - MIR SINE MIR -112 150 73 355 265 0 31 chr10 125846372 125846470 -19742818 - MIR SINE MIR -93 169 75 1871 203 63 16 chr10 125846483 125846987 -19742301 - MER77 LTR ERV1 0 605 21 1824 201 68 100 chr10 125846987 125847559 -19741729 - MLT2B3 LTR ERVL 0 554 1 1871 203 63 16 chr10 125847559 125847582 -19741706 - MER77 LTR ERV1 -584 21 1 2098 119 7 0 chr10 125847813 125848106 -19741182 + AluSq SINE Alu 1 295 -18 216 254 191 0 chr10 125848149 125848212 -19741076 - L2 LINE L2 -2 3311 3237 1128 288 50 87 chr10 125848296 125849001 -19740287 + L3 LINE CR1 345 1023 -554 2132 107 7 7 chr10 125849118 125849408 -19739880 + AluSg SINE Alu 1 290 -20 187 167 0 93 chr10 125850204 125850258 -19739030 + MER5C DNA MER1_type 226 274 -50 610 304 32 29 chr10 125851956 125852041 -19737247 - MIR SINE MIR -12 250 167 2386 96 3 0 chr10 125852041 125852342 -19736946 + AluSp SINE Alu 1 302 -11 610 304 32 29 chr10 125852342 125852499 -19736789 - MIR SINE MIR -95 167 17 214 316 61 10 chr10 125853492 125853590 -19735698 - MIR3 SINE MIR -7 201 99 185 325 57 64 chr10 125853887 125854044 -19735244 - L2 LINE L2 -223 3049 2894 769 270 106 19 chr10 125854395 125854773 -19734515 + L1ME4a LINE L1 5677 6087 -34 2145 168 37 97 chr10 125854851 125855387 -19733901 - MLT1D LTR MaLR 0 505 2 207 0 0 0 chr10 125855559 125855582 -19733706 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 227 121 0 0 chr10 125855596 125855629 -19733659 + Alu SINE Alu 1 33 -268 370 234 142 21 chr10 125856062 125856203 -19733085 - MIR SINE MIR -102 160 3 23 0 0 0 chr10 125856378 125856401 -19732887 + AT_rich Low_complexity Low_complexity 1 23 0 2191 101 6 22 chr10 125856857 125857173 -19732115 + AluSq SINE Alu 1 311 -2 1503 120 51 0 chr10 125857716 125857933 -19731355 + MER30 DNA MER1_type 1 228 -2 279 278 11 11 chr10 125858116 125858206 -19731082 + MER117 DNA MER1_type 2 91 -106 763 294 26 13 chr10 125858287 125858515 -19730773 + MIR SINE MIR 32 262 0 1647 182 0 0 chr10 125858549 125858802 -19730486 - AluJb SINE Alu -59 253 1 1695 113 0 4 chr10 125858815 125859053 -19730235 - AluSq SINE Alu -1 312 76 316 211 97 44 chr10 125859257 125859371 -19729917 - MER112 DNA MER1_type -90 170 51 198 0 0 0 chr10 125859482 125859504 -19729784 + (A)n Simple_repeat Simple_repeat 1 22 0 1675 190 138 83 chr10 125859694 125859951 -19729337 - MER68 LTR ERV1 -2 560 318 243 0 0 0 chr10 125859951 125859978 -19729310 + (TTTTG)n Simple_repeat Simple_repeat 1 27 0 2050 92 11 4 chr10 125859982 125860253 -19729035 - AluSg SINE Alu -37 273 1 1675 190 138 83 chr10 125860253 125860521 -19728767 - MER68 LTR ERV1 -246 316 1 365 396 0 7 chr10 125861695 125861844 -19727444 + MIR3 SINE MIR 55 202 -6 415 262 147 48 chr10 125861863 125862152 -19727136 - L1MEd LINE L1 -4862 1257 913 2128 123 0 25 chr10 125862152 125862468 -19726820 - AluSx SINE Alu -4 308 1 415 262 147 48 chr10 125862468 125862594 -19726694 - L1MEd LINE L1 -5206 913 801 * 936 225 116 25 chr10 125862591 125862867 -19726421 - L1ME3A LINE L1 -28 6142 5842 1112 221 65 37 chr10 125862870 125863164 -19726124 - MLT1A2 LTR MaLR 0 374 73 872 275 101 29 chr10 125863164 125863328 -19725960 - L1ME3A LINE L1 -347 5823 5672 2336 115 0 6 chr10 125863328 125863642 -19725646 - AluSx SINE Alu 0 312 1 872 275 101 29 chr10 125863642 125863863 -19725425 - L1ME3A LINE L1 -498 5672 5410 610 226 57 77 chr10 125863931 125864179 -19725109 - L1MEd LINE L1 -5294 825 583 623 276 58 87 chr10 125864257 125864637 -19724651 - L1MEd LINE L1 -5679 440 72 261 170 21 0 chr10 125864623 125864670 -19724618 - L1ME1 LINE L1 -19 6147 6100 * 2669 229 52 52 chr10 125864674 125865165 -19724123 - L1MCc LINE L1 -3037 3904 3414 186 43 0 0 chr10 125865165 125865188 -19724100 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 2669 229 52 52 chr10 125865188 125865282 -19724006 - L1MCc LINE L1 -3527 3414 3321 2185 125 3 10 chr10 125865282 125865595 -19723693 - AluSx SINE Alu -1 311 1 2669 229 52 52 chr10 125865595 125866298 -19722990 - L1MCc LINE L1 -3620 3321 2646 296 79 0 0 chr10 125866338 125866376 -19722912 - MER58B DNA MER1_type -2 339 302 13384 102 19 18 chr10 125866376 125868332 -19720956 - Tigger1 DNA MER2_type 0 2418 461 754 233 55 7 chr10 125868348 125868494 -19720794 + AluSg/x SINE Alu 139 291 -21 2942 156 8 4 chr10 125868494 125868962 -19720326 - Tigger1 DNA MER2_type -1948 470 1 637 162 0 118 chr10 125868962 125869060 -19720228 - MER58B DNA MER1_type -2117 303 224 1918 131 21 0 chr10 125869060 125869342 -19719946 + AluSx SINE Alu 21 308 -4 637 162 0 118 chr10 125869342 125869378 -19719910 - MER58B DNA MER1_type -2196 224 185 1897 244 126 67 chr10 125869421 125870308 -19718980 - L1MCc LINE L1 -4459 2482 1649 2239 117 0 7 chr10 125870308 125870617 -19718671 - AluSx SINE Alu -5 307 1 1897 244 126 67 chr10 125870617 125871393 -19717895 - L1MCc LINE L1 -5292 1649 649 709 210 66 12 chr10 125871497 125871664 -19717624 - L1MCc LINE L1 -5981 442 267 2424 93 0 0 chr10 125871670 125871980 -19717308 - AluSg SINE Alu 0 310 1 1508 194 63 31 chr10 125872003 125872366 -19716922 + MLT2B1 LTR ERVL 1 374 -40 438 20 0 0 chr10 125872366 125872417 -19716871 + (CA)n Simple_repeat Simple_repeat 1 51 0 1508 194 63 31 chr10 125872417 125872460 -19716828 + MLT2B1 LTR ERVL 374 414 0 439 194 83 15 chr10 125872460 125872652 -19716636 - L1MCc LINE L1 -6159 264 25 199 296 0 0 chr10 125872862 125872906 -19716382 - MIR SINE MIR -115 147 104 216 276 29 57 chr10 125873578 125873683 -19715605 - L2 LINE L2 -607 2707 2606 526 332 30 20 chr10 125874094 125874296 -19714992 + MIR SINE MIR 45 248 -14 1862 136 42 14 chr10 125874610 125874896 -19714392 - AluJb SINE Alu -18 294 1 279 269 85 57 chr10 125874911 125875052 -19714236 - MIR SINE MIR -56 206 62 408 348 122 17 chr10 125875276 125875638 -19713650 + L3 LINE CR1 1052 1451 -126 521 186 60 48 chr10 125875684 125875851 -19713437 + L1MC5 LINE L1 7625 7793 -168 199 242 0 33 chr10 125875851 125875942 -19713346 + GA-rich Low_complexity Low_complexity 4 91 0 1023 167 6 25 chr10 125875946 125876108 -19713180 + FRAM SINE Alu 1 159 -7 2306 103 7 0 chr10 125876661 125876971 -19712317 - AluSx SINE Alu 0 312 1 325 309 12 48 chr10 125877320 125877488 -19711800 + L3 LINE CR1 1296 1457 -120 222 327 83 77 chr10 125877734 125877767 -19711521 + L2 LINE L2 3077 3108 -164 1735 161 14 4 chr10 125877767 125878080 -19711208 - AluJb SINE Alu 0 316 1 222 327 83 77 chr10 125878080 125878201 -19711087 + L2 LINE L2 3108 3233 -39 304 203 93 102 chr10 125879660 125879699 -19709589 + MER94 DNA DNA 1 39 -95 2216 100 10 0 chr10 125879699 125879989 -19709299 - AluSq SINE Alu -20 293 1 304 203 93 102 chr10 125879989 125880067 -19709221 + MER94 DNA DNA 39 117 -17 350 277 7 66 chr10 125880904 125881041 -19708247 + L1MC4 LINE L1 6575 6703 -1339 690 207 0 0 chr10 125881047 125881395 -19707893 + (TA)n Simple_repeat Simple_repeat 1 348 0 238 196 0 128 chr10 125881416 125881518 -19707770 + L1MC4 LINE L1 6615 6703 -1339 304 266 156 0 chr10 125881799 125881927 -19707361 + L2 LINE L2 2544 2691 -623 * 447 288 201 61 chr10 125881916 125882389 -19706899 - L2 LINE L2 -903 2411 1873 826 288 99 4 chr10 125882453 125882686 -19706602 - MIR SINE MIR 0 262 8 23 0 0 0 chr10 125882710 125882733 -19706555 + AT_rich Low_complexity Low_complexity 1 23 0 2049 128 10 0 chr10 125882898 125883340 -19705948 + AluSx SINE Alu 14 458 0 195 304 0 0 chr10 125883443 125883499 -19705789 + MIR SINE MIR 193 248 -14 2150 107 20 10 chr10 125885639 125885938 -19703350 - AluSx SINE Alu -10 302 1 827 103 34 22 chr10 125887141 125887365 -19701923 + CT-rich Low_complexity Low_complexity 1 226 0 409 129 0 0 chr10 125887366 125887428 -19701860 + (TTCC)n Simple_repeat Simple_repeat 3 64 0 261 330 35 25 chr10 125888184 125888381 -19700907 + L1M4 LINE L1 4730 4928 -1218 1874 136 7 17 chr10 125888422 125888723 -19700565 - AluJb SINE Alu -13 299 2 22 35 0 0 chr10 125888882 125888911 -19700377 + AT_rich Low_complexity Low_complexity 1 29 0 1004 232 68 0 chr10 125889662 125889899 -19699389 - MIR SINE MIR -3 259 7 1556 127 15 109 chr10 125890191 125890346 -19698942 - L1MC3 LINE L1 0 7785 7678 2119 115 10 3 chr10 125890346 125890651 -19698637 + AluSx SINE Alu 1 307 -5 1556 127 15 109 chr10 125890651 125890834 -19698454 - L1MC3 LINE L1 -107 7678 7479 416 332 125 41 chr10 125891213 125891382 -19697906 + L2 LINE L2 1618 1771 -1543 2604 107 34 11 chr10 125891382 125891738 -19697550 - THE1B LTR MaLR 0 364 1 416 332 125 41 chr10 125891738 125892370 -19696918 + L2 LINE L2 1771 2486 -828 1455 158 188 17 chr10 125892458 125892750 -19696538 - MER2 DNA MER2_type -1 343 2 1858 169 0 6 chr10 125892922 125893235 -19696053 + AluSx SINE Alu 1 311 -1 1320 187 81 14 chr10 125893276 125893560 -19695728 + AluJo SINE Alu 1 303 -9 2071 162 51 49 chr10 125894177 125894449 -19694839 - MSTB1 LTR MaLR 0 432 157 1993 128 25 0 chr10 125894449 125894730 -19694558 + AluSx SINE Alu 1 288 -24 2071 162 51 49 chr10 125894730 125894888 -19694400 - MSTB1 LTR MaLR -275 157 1 2015 175 11 3 chr10 125896409 125896763 -19692525 - MLT1A1 LTR MaLR -4 361 5 3700 114 0 22 chr10 125897212 125897748 -19691540 - MER1A DNA MER1_type 0 527 4 1871 196 60 18 chr10 125897794 125898242 -19691046 - MLT1C LTR MaLR 0 467 1 1851 182 0 10 chr10 125898423 125898730 -19690558 + AluSx SINE Alu 1 304 -8 1899 148 0 45 chr10 125898853 125899163 -19690125 + AluSx SINE Alu 1 296 -16 830 262 39 0 chr10 125899832 125900061 -19689227 - MIR SINE MIR -17 245 8 2157 116 3 3 chr10 125900101 125900394 -19688894 + AluSx SINE Alu 1 293 -19 265 300 15 1 chr10 125900474 125900563 -19688725 + MIR SINE MIR 30 120 -88 869 236 116 11 chr10 125900612 125900975 -19688313 + L2 LINE L2 2672 3090 -223 1322 239 131 91 chr10 125900980 125901552 -19687736 - MLT1G LTR MaLR 0 590 1 552 228 136 22 chr10 125901553 125901737 -19687551 + L2 LINE L2 3109 3313 0 348 300 58 37 chr10 125901713 125901903 -19687385 - MIR SINE MIR -49 213 20 * 339 286 24 16 chr10 125902799 125902925 -19686363 + L2 LINE L2 1699 1825 -1489 284 360 65 7 chr10 125903353 125903492 -19685796 - L2 LINE L2 -4 3268 3122 2352 108 0 0 chr10 125904178 125904485 -19684803 - AluSg SINE Alu -3 307 1 246 268 113 10 chr10 125904551 125904648 -19684640 + MIR SINE MIR 49 155 -107 22 70 0 0 chr10 125904760 125904803 -19684485 + AT_rich Low_complexity Low_complexity 1 43 0 2038 120 14 0 chr10 125904816 125905091 -19684197 + AluSx SINE Alu 1 279 -33 746 241 16 76 chr10 125906567 125906816 -19682472 - MER102a DNA MER1_type -1 329 96 21 36 0 0 chr10 125906916 125906944 -19682344 + AT_rich Low_complexity Low_complexity 1 28 0 883 201 0 6 chr10 125907784 125907948 -19681340 + MER63 DNA MER1_type 1 789 -273 505 263 187 15 chr10 125908515 125908713 -19680575 - MIR SINE MIR -25 237 6 193 281 37 49 chr10 125909957 125910039 -19679249 + MIR SINE MIR 85 165 -97 181 250 261 0 chr10 125910296 125910388 -19678900 - L2 LINE L2 0 3272 3157 2304 92 3 0 chr10 125910592 125910887 -19678401 - AluSx SINE Alu -16 296 1 756 243 115 21 chr10 125911275 125911510 -19677778 + MIR SINE MIR 6 262 0 527 253 5 86 chr10 125911653 125911851 -19677437 - MER5A DNA MER1_type -1 188 7 1959 154 0 16 chr10 125911983 125912294 -19676994 - AluSx SINE Alu -6 306 1 24 0 0 0 chr10 125912458 125912482 -19676806 + AT_rich Low_complexity Low_complexity 1 24 0 211 217 67 33 chr10 125913293 125913353 -19675935 + L3 LINE CR1 628 689 -888 216 300 25 12 chr10 125913495 125913575 -19675713 - L3 LINE CR1 -139 1438 1358 297 258 94 28 chr10 125913606 125913819 -19675469 + L2 LINE L2 2807 3033 -239 26 30 0 0 chr10 125913997 125914030 -19675258 + AT_rich Low_complexity Low_complexity 1 33 0 2339 99 0 3 chr10 125914038 125914342 -19674946 + AluSx SINE Alu 1 303 -9 7019 183 57 42 chr10 125914345 125916103 -19673185 - L1P4 LINE L1 -588 5578 3791 2127 80 4 4 chr10 125916103 125916365 -19672923 - AluY SINE Alu -15 296 35 7019 183 57 42 chr10 125916365 125916614 -19672674 - L1P4 LINE L1 -2375 3791 3547 2357 93 0 0 chr10 125916833 125917134 -19672154 - AluSg SINE Alu -7 303 3 648 0 0 0 chr10 125917743 125917815 -19671473 + (CA)n Simple_repeat Simple_repeat 2 73 0 234 276 26 13 chr10 125918422 125918498 -19670790 - MIR SINE MIR -10 252 176 2150 126 0 0 chr10 125918652 125918945 -19670343 - AluSx SINE Alu -19 293 1 4791 66 108 0 chr10 125919609 125920230 -19669058 + LTR12 LTR ERV1 1 688 0 21482 99 7 10 chr10 125920243 125923185 -19666103 + HERV9 LTR ERV1 40 2972 -5427 1342 117 5 0 chr10 125923184 125923372 -19665916 + HERV9 LTR ERV1 4756 4944 -3455 * 2330 174 122 61 chr10 125923373 125924204 -19665084 + Harlequin LTR ERV1 840 1720 -5176 * 4704 98 3 5 chr10 125924199 125924843 -19664445 + Harlequin LTR ERV1 7757 8399 0 4951 72 78 0 chr10 125924843 125925481 -19663807 + LTR12 LTR ERV1 1 688 0 2362 100 3 0 chr10 125925752 125926061 -19663227 + AluSg SINE Alu 1 310 0 841 191 0 0 chr10 125926084 125926236 -19663052 - MIR SINE MIR -10 252 101 1418 186 57 16 chr10 125926550 125926922 -19662366 - LTR37A LTR ERV1 -3 423 37 442 247 103 58 chr10 125927099 125927273 -19662015 - MER5A DNA MER1_type -7 182 1 193 226 57 0 chr10 125927401 125927454 -19661834 - L2 LINE L2 -16 3297 3242 2051 139 0 0 chr10 125928869 125929185 -19660103 + AluSx SINE Alu 1 316 0 732 221 81 6 chr10 125929471 125929643 -19659645 + MER5A DNA MER1_type 5 189 0 478 286 46 31 chr10 125929651 125929847 -19659441 + MIR SINE MIR 58 256 -6 335 245 31 20 chr10 125929850 125929948 -19659340 + MIR SINE MIR 54 152 -110 1626 183 67 58 chr10 125930207 125930639 -19658649 - MER63B DNA MER1_type 0 436 1 440 302 50 11 chr10 125931120 125931302 -19657986 + MER5A DNA MER1_type 1 189 0 1337 207 83 16 chr10 125931444 125931756 -19657532 + MLT1A1 LTR MaLR 1 333 -32 488 127 13 0 chr10 125931756 125931835 -19657453 + MADE1 DNA Mariner 1 80 0 1313 144 5 31 chr10 125932150 125932372 -19656916 + MER20 DNA MER1_type 1 216 -3 4029 120 37 10 chr10 125933251 125933869 -19655419 + MER41B LTR ERV1 1 635 0 254 335 90 0 chr10 125933951 125934106 -19655182 - MIR3 SINE MIR -1 207 39 33 25 0 0 chr10 125934458 125934498 -19654790 + AT_rich Low_complexity Low_complexity 1 40 0 267 227 62 10 chr10 125934682 125934779 -19654509 - L1ME4a LINE L1 -2 6119 6018 181 146 42 0 chr10 125936103 125936151 -19653137 + (TA)n Simple_repeat Simple_repeat 2 51 0 2249 102 0 0 chr10 125938609 125938904 -19650384 - AluSx SINE Alu -17 295 1 2328 79 31 0 chr10 125939500 125939790 -19649498 + AluSq SINE Alu 3 301 -12 25 0 0 0 chr10 125939860 125939885 -19649403 + AT_rich Low_complexity Low_complexity 1 25 0 232 159 0 23 chr10 125940305 125940349 -19648939 + LTR67 LTR ERVL 513 555 -2 428 270 85 66 chr10 125940351 125940562 -19648726 - L1ME4a LINE L1 -393 5728 5543 305 360 12 37 chr10 125941029 125941190 -19648098 + MIR SINE MIR 26 182 -80 1701 194 10 0 chr10 125941310 125941609 -19647679 + AluJo SINE Alu 1 302 -10 2261 103 3 0 chr10 125943191 125943493 -19645795 - AluSx SINE Alu -9 303 1 212 328 45 30 chr10 125943529 125943663 -19645625 + L2 LINE L2 3112 3247 -25 421 230 11 0 chr10 125944098 125944185 -19645103 - MLT1K LTR MaLR -2 586 499 2244 122 33 0 chr10 125947062 125947398 -19641890 - MER7A DNA MER2_type 0 346 2 216 343 38 19 chr10 125947718 125947823 -19641465 + L2 LINE L2 3106 3212 -60 2320 64 0 4 chr10 125947973 125948273 -19641015 - AluY SINE Alu 0 300 2 1102 166 25 0 chr10 125948805 125949004 -19640284 + L1MB2 LINE L1 5957 6160 -11 220 317 83 49 chr10 125949059 125949324 -19639964 + L2 LINE L2 2566 2839 -475 463 259 0 107 chr10 125949828 125949915 -19639373 - MIR SINE MIR -67 195 139 2167 124 3 0 chr10 125949915 125950213 -19639075 - AluSg SINE Alu -11 299 1 463 259 0 107 chr10 125950213 125950322 -19638966 - MIR SINE MIR -123 139 20 850 165 6 6 chr10 125950461 125950637 -19638651 + GA-rich Low_complexity Low_complexity 3 178 0 457 189 189 16 chr10 125951163 125951285 -19638003 + MIR SINE MIR 120 262 0 291 246 175 0 chr10 125952799 125952913 -19636375 - MIR SINE MIR -6 256 123 324 326 48 14 chr10 125952963 125953110 -19636178 - MER5B DNA MER1_type 0 178 27 269 162 176 54 chr10 125953197 125953271 -19636017 + MIR SINE MIR 79 161 -101 195 368 0 0 chr10 125953268 125953355 -19635933 - MIR SINE MIR -36 226 140 * 280 234 0 16 chr10 125953519 125953583 -19635705 + MIR3 SINE MIR 137 199 -9 32 0 0 0 chr10 125953787 125953819 -19635469 + AT_rich Low_complexity Low_complexity 1 32 0 843 277 10 5 chr10 125954608 125954810 -19634478 + MIR SINE MIR 4 206 -56 1139 259 117 27 chr10 125954904 125955141 -19634147 - L2 LINE L2 -71 3242 3028 1725 225 41 41 chr10 125955141 125955683 -19633605 - MER34 LTR ERV1 0 542 1 1139 259 117 27 chr10 125955683 125956061 -19633227 - L2 LINE L2 -285 3028 2550 412 278 0 10 chr10 125956066 125956163 -19633125 + L2 LINE L2 3177 3272 0 490 224 34 61 chr10 125956177 125956324 -19632964 + MIR SINE MIR 90 232 -30 283 243 11 9 chr10 125957327 125957467 -19631821 + MER5B DNA MER1_type 64 175 -3 600 281 73 31 chr10 125957542 125957734 -19631554 - MIR SINE MIR -55 207 8 400 114 0 25 chr10 125960750 125960829 -19628459 - AluSc SINE Alu 0 309 233 491 179 73 60 chr10 125961346 125961497 -19627791 + L2 LINE L2 2141 2293 -1021 3036 117 0 0 chr10 125961497 125961958 -19627330 - L1P LINE L1 -5675 471 11 2781 240 49 25 chr10 125961960 125962753 -19626535 + L2 LINE L2 2261 3069 -244 2331 99 7 0 chr10 125962764 125963067 -19626221 + AluSp SINE Alu 1 305 -8 1054 167 0 0 chr10 125963067 125963223 -19626065 + AluJb SINE Alu 134 289 -23 36 0 0 0 chr10 125963223 125963259 -19626029 + AT_rich Low_complexity Low_complexity 1 36 0 360 0 0 0 chr10 125963602 125963642 -19625646 + (TG)n Simple_repeat Simple_repeat 1 40 0 192 40 0 0 chr10 125963641 125963666 -19625622 + (GA)n Simple_repeat Simple_repeat 1 25 0 * 1885 124 11 15 chr10 125963666 125963940 -19625348 - AluSx SINE Alu -39 273 1 2771 16 0 0 chr10 125964144 125964453 -19624835 + AluYa5 SINE Alu 1 309 -2 226 340 134 10 chr10 125968618 125968715 -19620573 + MIR3 SINE MIR 71 179 -29 447 92 0 0 chr10 125968739 125968804 -19620484 + (TG)n Simple_repeat Simple_repeat 2 66 0 349 306 47 50 chr10 125968921 125969121 -19620167 - MIR SINE MIR -18 190 21 831 262 214 80 chr10 125969289 125969623 -19619665 - HAL1 LINE L1 -182 2325 2037 2622 103 46 19 chr10 125969623 125970040 -19619248 - MSTA LTR MaLR 0 428 1 831 262 214 80 chr10 125970040 125970453 -19618835 - HAL1 LINE L1 -470 2037 1681 2701 10 0 0 chr10 125970453 125970745 -19618543 - AluYa5 SINE Alu -6 305 14 831 262 214 80 chr10 125970745 125971079 -19618209 - HAL1 LINE L1 -826 1681 1393 198 118 0 0 chr10 125971079 125971113 -19618175 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 831 262 214 80 chr10 125971113 125972079 -19617209 - HAL1 LINE L1 -1114 1393 1 1922 35 0 0 chr10 125973674 125973902 -19615386 - L1PA7 LINE L1 -8 6146 5919 255 246 172 45 chr10 125974582 125974716 -19614572 + MIR3 SINE MIR 16 166 -42 375 293 89 103 chr10 125975641 125976613 -19612675 - L1M2 LINE L1 -5446 1403 536 237 273 11 23 chr10 125976777 125976865 -19612423 + C-rich Low_complexity Low_complexity 4 90 0 28 48 0 0 chr10 125976904 125976946 -19612342 + GC_rich Low_complexity Low_complexity 1 42 0 759 244 30 67 chr10 125977263 125977533 -19611755 - MIR SINE MIR -2 260 1 22 0 0 0 chr10 125978069 125978091 -19611197 + AT_rich Low_complexity Low_complexity 1 22 0 27 0 0 0 chr10 125979778 125979805 -19609483 + AT_rich Low_complexity Low_complexity 1 27 0 1780 164 3 7 chr10 125979909 125980196 -19609092 + AluJo SINE Alu 2 287 -25 2236 101 0 3 chr10 125980351 125980649 -19608639 + AluSc SINE Alu 2 298 -11 189 147 0 0 chr10 125980668 125980702 -19608586 + (TA)n Simple_repeat Simple_repeat 2 35 0 213 333 177 21 chr10 125980959 125981151 -19608137 + L2 LINE L2 2804 3025 -247 2607 39 13 0 chr10 125981160 125981465 -19607823 - AluY SINE Alu -2 309 1 5346 226 52 33 chr10 125981622 125982718 -19606570 - L1ME1 LINE L1 -8 6418 5344 1585 198 3 22 chr10 125982718 125983036 -19606252 + AluJo SINE Alu 1 312 0 5346 226 52 33 chr10 125983036 125984600 -19604688 - L1ME1 LINE L1 -1082 5344 3718 1123 209 41 6 chr10 125984620 125984959 -19604329 - L1ME1 LINE L1 -3404 3002 2652 892 211 34 122 chr10 125984956 125985167 -19604121 - L1M4 LINE L1 -1231 4915 4687 * 1819 141 0 11 chr10 125985167 125985430 -19603858 - AluSx SINE Alu -27 285 26 892 211 34 122 chr10 125985430 125985749 -19603539 - L1M4 LINE L1 -1459 4687 4445 2143 124 0 3 chr10 125985749 125986048 -19603240 - AluSx SINE Alu -14 298 1 892 211 34 122 chr10 125986048 125986137 -19603151 - L1M4 LINE L1 -1701 4445 4350 1034 101 0 30 chr10 125986201 125986370 -19602918 - L1MA3 LINE L1 0 6305 6142 4940 127 12 16 chr10 125986371 125987944 -19601344 - L1MA3 LINE L1 -265 6040 4474 * 9018 90 18 0 chr10 125987941 125989203 -19600085 + THE1A-int LTR MaLR 296 1580 0 2498 108 0 19 chr10 125989203 125989565 -19599723 + THE1A LTR MaLR 1 355 0 1113 219 93 7 chr10 125989565 125989835 -19599453 - MSTD LTR MaLR -42 354 62 3927 244 116 22 chr10 125989838 125990983 -19598305 - MSTD-int LTR MaLR -71 1664 412 3642 144 48 0 chr10 125990984 125991561 -19597727 - LTR9 LTR ERV1 0 612 8 1448 263 17 12 chr10 125991564 125991979 -19597309 - MSTD-int LTR MaLR -1317 418 2 1717 190 78 19 chr10 125991981 125992355 -19596933 - MSTD LTR MaLR 0 396 1 301 238 0 0 chr10 125992364 125992444 -19596844 - MLT-int LTR MaLR -1396 339 260 259 254 0 0 chr10 125992449 125992512 -19596776 - L1ME1 LINE L1 -5507 902 840 479 139 39 47 chr10 125992512 125992641 -19596647 - L1MB7 LINE L1 0 6184 6057 1118 229 125 77 chr10 125992945 125993385 -19595903 + MLT1E2 LTR MaLR 137 615 -9 2272 190 26 0 chr10 125994044 125994465 -19594823 - MSTB1 LTR MaLR 0 432 1 1578 147 67 52 chr10 125994699 125995086 -19594202 + L1MA7 LINE L1 4340 4732 -1414 8786 106 16 11 chr10 125995086 125996143 -19593145 + HSMAR2 DNA Mariner 6 1073 -229 2353 99 48 20 chr10 125996143 125996497 -19592791 + THE1B LTR MaLR 1 364 0 8786 106 16 11 chr10 125996497 125996728 -19592560 + HSMAR2 DNA Mariner 1073 1301 -1 5255 169 22 22 chr10 125996728 125998262 -19591026 + L1MA7 LINE L1 4753 6291 0 1027 190 0 0 chr10 125998737 125998916 -19590372 - MER58A DNA MER1_type -1 223 45 225 339 36 51 chr10 125999145 125999340 -19589948 - L2 LINE L2 -2395 919 728 7007 113 13 2 chr10 125999779 126001040 -19588248 - L1MA2 LINE L1 0 6304 5028 451 241 78 54 chr10 126001643 126001809 -19587479 + MIR SINE MIR 93 262 0 209 273 40 10 chr10 126002047 126002146 -19587142 + (TATATG)n Simple_repeat Simple_repeat 6 107 0 21 0 0 0 chr10 126002392 126002413 -19586875 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 126003167 126003188 -19586100 + AT_rich Low_complexity Low_complexity 1 21 0 425 213 2 46 chr10 126003701 126003832 -19585456 - L1MB7 LINE L1 0 6184 6050 2026 127 3 3 chr10 126003832 126004123 -19585165 - AluSc SINE Alu -18 291 1 24 32 0 0 chr10 126004328 126004359 -19584929 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr10 126005041 126005062 -19584226 + AT_rich Low_complexity Low_complexity 1 21 0 219 188 0 0 chr10 126005353 126005401 -19583887 + T-rich Low_complexity Low_complexity 5 52 0 524 292 140 22 chr10 126005934 126006118 -19583170 - MIR SINE MIR -16 246 44 1199 258 54 98 chr10 126006299 126006363 -19582925 - MER21B LTR ERV1 -161 702 637 3459 136 13 4 chr10 126006363 126006885 -19582403 + MER1A DNA MER1_type 1 527 0 1199 258 54 98 chr10 126006885 126007453 -19581835 - MER21B LTR ERV1 -226 637 98 439 260 73 20 chr10 126007421 126007571 -19581717 - MER77 LTR ERV1 -403 202 45 * 662 274 87 17 chr10 126007885 126008115 -19581173 - MIR SINE MIR -11 251 6 2179 111 0 7 chr10 126008765 126009071 -19580217 - AluSc SINE Alu -5 304 1 318 239 111 17 chr10 126010831 126010948 -19578340 - MIR SINE MIR -37 225 98 2453 45 0 3 chr10 126011268 126011556 -19577732 + AluY SINE Alu 11 297 -14 195 100 0 0 chr10 126013924 126013954 -19575334 + (TG)n Simple_repeat Simple_repeat 1 30 0 7457 35 0 0 chr10 126014642 126016076 -19573212 - L1PA5 LINE L1 0 6154 4722 19122 46 7 0 chr10 126016076 126018501 -19570787 + L1PA5 LINE L1 2304 4745 -1401 1352 205 3 20 chr10 126018560 126018853 -19570435 - AluJb SINE Alu 0 312 25 3494 146 26 0 chr10 126018999 126019580 -19569708 - L1MC1 LINE L1 -5 6328 5733 860 80 26 0 chr10 126019802 126019915 -19569373 + AluSp/q SINE Alu 177 292 -21 280 232 29 0 chr10 126019929 126019998 -19569290 - LTR67 LTR ERVL -12 545 475 491 259 60 43 chr10 126020003 126020137 -19569151 + MLT1J LTR MaLR 4 134 -377 2146 119 76 17 chr10 126020137 126020481 -19568807 - THE1B LTR MaLR 0 364 1 11358 91 9 4 chr10 126020481 126022052 -19567236 - THE1B-int LTR MaLR 0 1580 1 2090 132 79 15 chr10 126022052 126022394 -19566894 - THE1B LTR MaLR 0 364 1 491 259 60 43 chr10 126022394 126022442 -19566846 + MLT1J LTR MaLR 133 191 -320 236 267 40 0 chr10 126022500 126022575 -19566713 + MLT1J LTR MaLR 391 468 -43 22 35 0 0 chr10 126023052 126023081 -19566207 + AT_rich Low_complexity Low_complexity 1 29 0 214 291 146 27 chr10 126023243 126023353 -19565935 - L3b LINE CR1 -253 1330 1208 427 301 40 40 chr10 126023728 126023927 -19565361 + L2 LINE L2 3115 3313 0 2432 246 51 77 chr10 126024673 126025908 -19563380 - L2 LINE L2 0 3313 2110 595 197 197 0 chr10 126026198 126026345 -19562943 - MLT1A2 LTR MaLR 0 374 199 306 169 0 0 chr10 126026395 126026460 -19562828 + GA-rich Low_complexity Low_complexity 2 66 0 950 213 16 6 chr10 126026491 126026674 -19562614 - MLT1A2 LTR MaLR -186 188 4 2091 103 6 19 chr10 126026683 126026860 -19562428 - AluSg SINE Alu -1 309 136 2275 64 0 35 chr10 126026860 126027171 -19562117 - AluY SINE Alu -11 300 1 2091 103 6 19 chr10 126027171 126027304 -19561984 - AluSg SINE Alu -174 136 3 26 64 0 0 chr10 126027617 126027664 -19561624 + AT_rich Low_complexity Low_complexity 1 47 0 24 0 0 0 chr10 126027766 126027790 -19561498 + AT_rich Low_complexity Low_complexity 1 24 0 13741 166 28 41 chr10 126029051 126031274 -19558014 - L1MA4A LINE L1 -5 6298 4047 1831 233 55 43 chr10 126031274 126031460 -19557828 - LTR9 LTR ERV1 0 612 430 1885 124 62 0 chr10 126031460 126031750 -19557538 - AluSx SINE Alu -4 308 1 1831 233 55 43 chr10 126031750 126032168 -19557120 - LTR9 LTR ERV1 -182 430 1 13741 166 28 41 chr10 126032168 126033441 -19555847 - L1MA4A LINE L1 -2256 4047 2874 23841 45 8 14 chr10 126033441 126037301 -19551987 - L1PA5 LINE L1 -3 6151 2308 13741 166 28 41 chr10 126037301 126038042 -19551246 - L1MA4A LINE L1 -3429 2874 2125 406 286 120 31 chr10 126038090 126038282 -19551006 - MIR SINE MIR 0 262 54 660 297 19 23 chr10 126038388 126038644 -19550644 - L2 LINE L2 -514 2800 2546 983 234 54 22 chr10 126038953 126039231 -19550057 - L2 LINE L2 -804 2510 2224 1849 153 67 3 chr10 126039579 126039951 -19549337 + L1MA4 LINE L1 5901 6296 -4 990 226 71 28 chr10 126040259 126040542 -19548746 - MLT1D LTR MaLR -206 299 5 375 210 25 67 chr10 126040731 126040850 -19548438 - L1MC4 LINE L1 -1 8041 7928 810 163 95 0 chr10 126040974 126041121 -19548167 - MER58B DNA MER1_type -1 340 180 29 47 0 0 chr10 126041842 126041885 -19547403 + AT_rich Low_complexity Low_complexity 1 43 0 23 0 0 0 chr10 126042142 126042165 -19547123 + AT_rich Low_complexity Low_complexity 1 23 0 25 90 0 0 chr10 126042231 126042298 -19546990 + AT_rich Low_complexity Low_complexity 1 67 0 29 0 0 0 chr10 126042312 126042341 -19546947 + AT_rich Low_complexity Low_complexity 1 29 0 25 31 0 0 chr10 126042485 126042517 -19546771 + AT_rich Low_complexity Low_complexity 1 32 0 883 117 9 126 chr10 126043650 126043864 -19545424 + MER53 DNA DNA 1 189 0 227 209 30 15 chr10 126044888 126044955 -19544333 + (TAGA)n Simple_repeat Simple_repeat 4 71 0 463 333 170 26 chr10 126044957 126045363 -19543925 - L2 LINE L2 -203 3110 2640 1408 254 134 13 chr10 126045366 126045890 -19543398 - L2 LINE L2 -1114 2200 1614 322 262 66 25 chr10 126045980 126046102 -19543186 - L1M4 LINE L1 -2947 3199 3073 * 339 209 0 0 chr10 126045995 126046105 -19543183 + T-rich Low_complexity Low_complexity 1 110 0 1729 145 0 7 chr10 126046106 126046375 -19542913 - AluJo SINE Alu -45 267 1 527 154 55 0 chr10 126046401 126046492 -19542796 + MER58C DNA MER1_type 119 214 -1 295 212 24 24 chr10 126046507 126046592 -19542696 - L2 LINE L2 -1817 1497 1413 4240 136 29 5 chr10 126047089 126047827 -19541461 + L1MA4 LINE L1 5541 6295 -5 21 0 0 0 chr10 126047924 126047945 -19541343 + AT_rich Low_complexity Low_complexity 1 21 0 4941 174 36 16 chr10 126048609 126050175 -19539113 - L1MB3 LINE L1 -7 6176 4583 5686 181 34 38 chr10 126050492 126051914 -19537374 - L1MB8 LINE L1 0 6178 4770 2249 109 0 7 chr10 126051914 126052216 -19537072 - AluSx SINE Alu -12 300 1 5686 181 34 38 chr10 126052216 126053028 -19536260 - L1MB8 LINE L1 -1408 4770 3957 28 99 0 0 chr10 126053650 126053741 -19535547 + AT_rich Low_complexity Low_complexity 1 91 0 23 0 0 0 chr10 126054115 126054138 -19535150 + AT_rich Low_complexity Low_complexity 1 23 0 2321 319 120 4 chr10 126054853 126055795 -19533493 + L2 LINE L2 380 1430 -1884 759 337 87 30 chr10 126056005 126056604 -19532684 - L1MB8 LINE L1 -3316 2830 2198 214 175 0 48 chr10 126056940 126057003 -19532285 + T-rich Low_complexity Low_complexity 1 60 0 34 24 0 0 chr10 126057202 126057243 -19532045 + AT_rich Low_complexity Low_complexity 1 41 0 1255 180 9 0 chr10 126057265 126057487 -19531801 - MER58A DNA MER1_type 0 224 1 265 354 74 17 chr10 126057630 126057805 -19531483 - L1MEd LINE L1 -5647 472 288 27 49 0 0 chr10 126058389 126058430 -19530858 + AT_rich Low_complexity Low_complexity 1 41 0 2705 35 14 2 chr10 126058579 126059110 -19530178 - L1P2 LINE L1 -568 5586 5052 1884 227 104 135 chr10 126059113 126060105 -19529183 - L2 LINE L2 -635 2679 1719 446 195 102 16 chr10 126060107 126060235 -19529053 - LTR16C LTR ERVL -2 489 351 468 181 96 0 chr10 126060359 126060453 -19528835 - AluSq/x SINE Alu -187 126 24 1804 159 36 0 chr10 126060575 126060911 -19528377 - AluSx SINE Alu 0 347 1 1194 176 37 118 chr10 126061240 126061614 -19527674 + MLT1A1 LTR MaLR 1 344 -21 198 209 23 0 chr10 126061715 126061758 -19527530 + L2 LINE L2 3270 3313 0 595 298 118 8 chr10 126061948 126062210 -19527078 + LTR33 LTR ERVL 102 392 -129 325 298 41 41 chr10 126062991 126063209 -19526079 - L1ME3A LINE L1 -224 5946 5729 * 877 303 68 47 chr10 126063203 126063547 -19525741 + HAL1b LINE L1 276 640 -708 529 266 59 54 chr10 126063547 126063769 -19525519 - MER58A DNA MER1_type -1 223 1 877 303 68 47 chr10 126063769 126064041 -19525247 + HAL1b LINE L1 640 905 -443 2946 200 78 15 chr10 126064043 126064784 -19524504 + Looper DNA T2_type 3 790 -768 453 224 115 6 chr10 126064826 126064982 -19524306 + Looper DNA T2_type 1385 1557 -1 325 279 130 47 chr10 126065758 126066360 -19522928 + L1 LINE L1 2809 3460 -2686 24 0 0 0 chr10 126066673 126066697 -19522591 + AT_rich Low_complexity Low_complexity 1 24 0 304 312 126 10 chr10 126066742 126067043 -19522245 + L1 LINE L1 3769 4104 -2042 222 250 0 0 chr10 126067052 126067140 -19522148 + (TA)n Simple_repeat Simple_repeat 1 88 0 2827 244 93 60 chr10 126067167 126068589 -19520699 + L1MC4a LINE L1 5897 7364 -444 603 199 20 68 chr10 126068600 126068746 -19520542 - MER58B DNA MER1_type -1 340 202 1438 107 76 84 chr10 126068746 126068892 -19520396 + L1MA3 LINE L1 5191 5337 -956 4384 109 86 9 chr10 126068892 126069660 -19519628 + L1MA3 LINE L1 5479 6305 0 1438 107 76 84 chr10 126069660 126069876 -19519412 + L1MA3 LINE L1 5337 5550 -743 888 197 33 170 chr10 126069955 126070380 -19518908 + L1MC4 LINE L1 7459 7812 -230 2181 97 33 3 chr10 126070380 126070680 -19518608 - AluSc SINE Alu 0 309 1 888 197 33 170 chr10 126070680 126070737 -19518551 + L1MC4 LINE L1 7812 7875 -167 398 141 0 26 chr10 126070741 126070819 -19518469 + (GGGAGA)n Simple_repeat Simple_repeat 3 78 0 266 149 160 75 chr10 126070837 126070931 -19518357 + L1MC4 LINE L1 7939 8040 -2 23 0 0 0 chr10 126071379 126071402 -19517886 + AT_rich Low_complexity Low_complexity 1 23 0 7185 130 51 1 chr10 126071728 126072899 -19516389 + Tigger3b DNA MER2_type 1 1230 -1 211 328 88 16 chr10 126073134 126073259 -19516029 - L3 LINE CR1 -113 1464 1331 7232 153 40 23 chr10 126073271 126074203 -19515085 - L1MA3 LINE L1 0 7724 6809 1924 143 18 49 chr10 126074203 126074588 -19514700 + THE1C LTR MaLR 1 373 -2 7232 153 40 23 chr10 126074588 126076043 -19513245 - L1MA3 LINE L1 -915 6809 5287 4910 190 42 30 chr10 126076042 126078460 -19510828 - L1MA3 LINE L1 -2608 4957 2513 * 579 254 92 26 chr10 126078468 126078696 -19510592 - L1M4 LINE L1 -945 6620 6378 704 220 6 38 chr10 126078706 126078865 -19510423 + AluJo SINE Alu 126 279 -33 240 35 0 0 chr10 126078868 126078897 -19510391 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 3488 253 90 12 chr10 126078912 126080251 -19509037 - L1M4 LINE L1 -1253 6312 4870 * 4931 160 20 22 chr10 126080243 126080317 -19508971 - L1MA8 LINE L1 -430 5861 5788 774 158 87 158 chr10 126080317 126080570 -19508718 + MER8 DNA MER2_type 1 235 -4 4931 160 20 22 chr10 126080570 126081958 -19507330 - L1MA8 LINE L1 -503 5788 4401 2028 109 21 0 chr10 126081992 126082275 -19507013 + AluSc SINE Alu 1 289 -20 17434 28 0 1 chr10 126082931 126085772 -19503516 - L1PA3 LINE L1 0 6155 3315 1948 138 0 47 chr10 126086280 126086598 -19502690 - AluSx SINE Alu -9 303 1 4359 185 35 3 chr10 126086730 126087643 -19501645 - L1MA8 LINE L1 -1723 4423 3482 700 236 123 23 chr10 126087662 126087947 -19501341 - L1M4 LINE L1 -4217 3350 3043 330 228 31 56 chr10 126087985 126088147 -19501141 - L1MEc LINE L1 -3934 2643 2449 2617 222 67 19 chr10 126088161 126089039 -19500249 - L1MEc LINE L1 -3996 2544 1625 830 263 64 6 chr10 126089048 126089375 -19499913 - L1MEc LINE L1 -4292 2104 1759 6345 53 0 2 chr10 126089389 126090174 -19499114 - L1PA6 LINE L1 -1 6153 5371 381 260 213 47 chr10 126090183 126090479 -19498809 - L1MEc LINE L1 -4571 1644 1300 1437 278 47 61 chr10 126090713 126091649 -19497639 - L1MEc LINE L1 -5215 1181 259 311 200 88 24 chr10 126091754 126091879 -19497409 + L1MEc LINE L1 23 155 -6241 275 313 40 10 chr10 126091966 126092065 -19497223 - L1MEc LINE L1 -6144 252 151 1656 216 66 16 chr10 126092841 126093267 -19496021 - L1MD2 LINE L1 -2 6357 5911 * 4094 216 73 54 chr10 126093253 126093752 -19495536 - L1MDa LINE L1 -3977 2563 2075 873 10 0 0 chr10 126093752 126093854 -19495434 - L1PA2 LINE L1 0 6155 6054 4094 216 73 54 chr10 126093854 126094313 -19494975 - L1MDa LINE L1 -4465 2075 1626 1848 51 4 0 chr10 126094313 126094549 -19494739 - L1PA4 LINE L1 0 6155 5919 4094 216 73 54 chr10 126094549 126094728 -19494560 - L1MDa LINE L1 -4914 1626 1452 814 149 25 37 chr10 126094728 126094889 -19494399 - L1PA16 LINE L1 -9 6157 5999 4094 216 73 54 chr10 126094889 126095056 -19494232 - L1MDa LINE L1 -5088 1452 1290 4605 88 14 11 chr10 126095056 126095712 -19493576 + L1PA13 LINE L1 5500 6157 -6 4094 216 73 54 chr10 126095712 126095947 -19493341 - L1MDa LINE L1 -5250 1290 992 1047 299 108 8 chr10 126096001 126096362 -19492926 - L1MDa LINE L1 -5991 552 156 318 324 69 14 chr10 126096363 126096508 -19492780 + MIR SINE MIR 70 222 -40 295 255 153 20 chr10 126096538 126096734 -19492554 + L1MC4a LINE L1 5688 5909 -1899 297 0 0 0 chr10 126096743 126096776 -19492512 + (CA)n Simple_repeat Simple_repeat 2 34 0 21 0 0 0 chr10 126097015 126097036 -19492252 + AT_rich Low_complexity Low_complexity 1 21 0 233 274 158 0 chr10 126097997 126098092 -19491196 + L2 LINE L2 3195 3304 -9 199 173 269 0 chr10 126098226 126098278 -19491010 + L2 LINE L2 3207 3272 0 766 301 63 15 chr10 126098869 126099264 -19490024 - L1ME LINE L1 -421 5749 5336 22 35 0 0 chr10 126099290 126099319 -19489969 + AT_rich Low_complexity Low_complexity 1 29 0 209 169 46 46 chr10 126099588 126099653 -19489635 + T-rich Low_complexity Low_complexity 3 67 0 180 0 0 0 chr10 126099786 126099806 -19489482 + (TTTAA)n Simple_repeat Simple_repeat 2 21 0 2115 118 3 0 chr10 126099806 126100095 -19489193 - AluSq SINE Alu -23 290 1 22 80 0 0 chr10 126100422 126100472 -19488816 + AT_rich Low_complexity Low_complexity 1 50 0 18849 102 10 21 chr10 126100662 126101662 -19487626 - Charlie3 DNA MER1_type 0 2706 1697 2408 86 10 0 chr10 126101662 126101963 -19487325 + AluSg SINE Alu 1 304 -6 18849 102 10 21 chr10 126101963 126102330 -19486958 - Charlie3 DNA MER1_type -1009 1697 1328 1813 190 0 0 chr10 126102330 126102640 -19486648 + AluJb SINE Alu 3 312 0 18849 102 10 21 chr10 126102640 126103960 -19485328 - Charlie3 DNA MER1_type -1378 1328 46 975 280 66 30 chr10 126104833 126105543 -19483745 + L1MEc LINE L1 1016 1751 -4645 727 243 23 41 chr10 126105704 126105922 -19483366 + AluSx SINE Alu 1 214 -98 806 153 0 8 chr10 126106456 126106587 -19482701 + AluSg/x SINE Alu 176 305 -5 302 200 62 12 chr10 126106587 126106667 -19482621 + MLT1J2 LTR MaLR 367 450 0 248 244 43 139 chr10 126106670 126106785 -19482503 + MIR SINE MIR 159 262 0 350 241 13 0 chr10 126107028 126107107 -19482181 - L3 LINE CR1 -5 1572 1493 194 359 26 8 chr10 126107331 126107448 -19481840 + MIR SINE MIR 73 191 -71 3891 206 13 7 chr10 126107821 126108658 -19480630 + L1P LINE L1 4510 5351 -795 1116 93 0 0 chr10 126108849 126108999 -19480289 + Tigger3(Golem) DNA MER2_type 2202 2351 -678 1834 259 47 38 chr10 126109007 126109815 -19479473 + L1PA13 LINE L1 1556 2371 -4426 474 335 45 0 chr10 126110398 126110553 -19478735 + MIR3 SINE MIR 18 179 -29 24 32 0 0 chr10 126110842 126110873 -19478415 + AT_rich Low_complexity Low_complexity 1 31 0 22 80 0 0 chr10 126111179 126111229 -19478059 + AT_rich Low_complexity Low_complexity 1 50 0 2643 122 17 22 chr10 126112183 126112600 -19476688 + L1PA16 LINE L1 5492 5906 -260 1226 250 95 58 chr10 126112218 126112839 -19476449 + L1ME3A LINE L1 5527 6170 0 * 207 0 0 0 chr10 126113469 126113492 -19475796 + (TTTTTA)n Simple_repeat Simple_repeat 2 24 0 2243 114 0 3 chr10 126113523 126113829 -19475459 - AluSq SINE Alu -2 311 7 24 32 0 0 chr10 126114125 126114156 -19475132 + AT_rich Low_complexity Low_complexity 1 31 0 28 0 0 0 chr10 126114304 126114332 -19474956 + AT_rich Low_complexity Low_complexity 1 28 0 1253 288 72 27 chr10 126114928 126115637 -19473651 - L2 LINE L2 -90 3223 2485 351 0 0 0 chr10 126115640 126115679 -19473609 + (GA)n Simple_repeat Simple_repeat 1 39 0 885 269 25 27 chr10 126115876 126116244 -19473044 - L1M4 LINE L1 -1479 4667 4301 279 0 0 0 chr10 126116269 126116300 -19472988 + (TTATA)n Simple_repeat Simple_repeat 3 33 0 1274 262 87 90 chr10 126116303 126117541 -19471747 - L1M4 LINE L1 -1995 4151 2772 2139 115 3 10 chr10 126117541 126117846 -19471442 + AluSc SINE Alu 1 303 -6 1274 262 87 90 chr10 126117846 126118477 -19470811 - L1M4 LINE L1 -3374 2772 2141 469 141 51 0 chr10 126118483 126118561 -19470727 - AluSg/x SINE Alu -14 298 217 390 85 0 0 chr10 126119621 126119680 -19469608 + (GA)n Simple_repeat Simple_repeat 2 60 0 2562 258 195 14 chr10 126119680 126120724 -19468564 - L2 LINE L2 -831 2483 1251 603 268 118 52 chr10 126120783 126121149 -19468139 - L1ME LINE L1 -404 5758 5369 447 333 44 27 chr10 126121188 126121413 -19467875 - L1ME LINE L1 -867 5279 5051 249 33 0 0 chr10 126121449 126121479 -19467809 + (TG)n Simple_repeat Simple_repeat 1 30 0 1456 244 56 34 chr10 126121619 126122066 -19467222 - MLT1C LTR MaLR 0 467 11 1086 285 102 38 chr10 126122084 126123121 -19466167 - L1ME LINE L1 -1774 4372 3269 403 211 145 7 chr10 126123152 126123304 -19465984 - L1MC4 LINE L1 -167 8686 8514 1750 165 7 0 chr10 126123342 126123639 -19465649 - AluJb SINE Alu 0 312 14 579 180 296 0 chr10 126123764 126123953 -19465335 - L1MC4 LINE L1 -365 8488 8244 1910 198 45 39 chr10 126123992 126124476 -19464812 - L1MB7 LINE L1 -16 6168 5682 * 5620 204 68 19 chr10 126124460 126127391 -19461897 - L1MC2 LINE L1 -13 7142 5017 198 0 0 0 chr10 126127391 126127413 -19461875 + (TTG)n Simple_repeat Simple_repeat 1 22 0 5620 204 68 19 chr10 126127413 126127842 -19461446 - L1MC2 LINE L1 -2138 5017 4610 2078 103 3 3 chr10 126127986 126128295 -19460993 - AluSg SINE Alu 0 309 1 2395 260 51 37 chr10 126128295 126129002 -19460286 - L1MC2 LINE L1 -6134 725 9 2114 103 0 19 chr10 126129011 126129321 -19459967 - AluY SINE Alu -7 304 1 22 0 0 0 chr10 126129472 126129494 -19459794 + AT_rich Low_complexity Low_complexity 1 22 0 468 211 67 26 chr10 126129649 126129910 -19459378 + L1ME3A LINE L1 5837 6169 -1 29 0 0 0 chr10 126130061 126130090 -19459198 + AT_rich Low_complexity Low_complexity 1 29 0 367 282 126 6 chr10 126132144 126132318 -19456970 - MIR SINE MIR -2 260 66 202 254 159 0 chr10 126133227 126133290 -19455998 + MER5B DNA MER1_type 88 160 -18 2401 88 0 0 chr10 126133980 126134287 -19455001 + AluSp SINE Alu 1 307 -6 269 304 129 22 chr10 126134850 126135074 -19454214 - MIR SINE MIR -6 256 9 2809 19 0 0 chr10 126135314 126135623 -19453665 - AluYb8 SINE Alu -9 309 1 2653 194 58 41 chr10 126135715 126136737 -19452551 + L1MA5A LINE L1 4889 5945 -352 3921 114 21 8 chr10 126136907 126137539 -19451749 + L1MA5A LINE L1 5653 6292 -5 327 338 6 6 chr10 126137603 126137760 -19451528 + L1M4 LINE L1 3713 3869 -2277 224 196 54 18 chr10 126137815 126137871 -19451417 + L2 LINE L2 3253 3310 -3 1886 105 0 45 chr10 126138252 126138519 -19450769 - AluSq SINE Alu -58 255 1 189 229 0 0 chr10 126138554 126138602 -19450686 + (TA)n Simple_repeat Simple_repeat 2 49 0 24 0 0 0 chr10 126138880 126138904 -19450384 + AT_rich Low_complexity Low_complexity 1 24 0 1934 317 93 18 chr10 126139247 126140696 -19448592 - HERV16 LTR ERVL -1905 3091 2098 2359 262 41 61 chr10 126140718 126141245 -19448043 - HERV16 LTR ERVL -3613 1383 879 2192 85 0 7 chr10 126141245 126141551 -19447737 - AluSg SINE Alu 0 305 2 2359 262 41 61 chr10 126141551 126141907 -19447381 - HERV16 LTR ERVL -4117 879 517 727 307 125 18 chr10 126141937 126142266 -19447022 - HERV16 LTR ERVL -4595 401 38 1279 307 37 16 chr10 126142303 126142736 -19446552 - LTR16A LTR ERVL -6 444 3 239 289 0 26 chr10 126142743 126142819 -19446469 - MLT1I LTR MaLR -47 362 289 35467 81 12 15 chr10 126142824 126148985 -19440303 - L1PA6 LINE L1 0 6154 2 274 240 90 30 chr10 126149092 126149192 -19440096 - MLT1I LTR MaLR -301 108 3 1469 302 90 27 chr10 126149435 126150290 -19438998 + HAL1 LINE L1 492 1400 -1107 1169 262 86 62 chr10 126150296 126150973 -19438315 + HAL1 LINE L1 1424 2161 -346 603 180 0 113 chr10 126150973 126151123 -19438165 + FLAM_A SINE Alu 1 133 0 1169 262 86 62 chr10 126151123 126151479 -19437809 + HAL1 LINE L1 2161 2507 0 477 281 104 22 chr10 126151813 126152297 -19436991 + L1ME LINE L1 5192 5583 -581 1765 134 18 0 chr10 126152424 126152708 -19436580 + L1M3 LINE L1 5335 5623 -560 204 301 110 0 chr10 126152721 126152794 -19436494 + MIR SINE MIR 87 167 -95 672 82 0 0 chr10 126153309 126153406 -19435882 - L1PA5 LINE L1 -1 6153 6057 207 273 0 0 chr10 126154350 126154416 -19434872 + T-rich Low_complexity Low_complexity 1 66 0 1729 161 47 0 chr10 126155237 126155516 -19433772 - AluSx SINE Alu -20 292 1 688 153 107 0 chr10 126156368 126156499 -19432789 + MER20 DNA MER1_type 2 146 -73 232 111 0 0 chr10 126156545 126156581 -19432707 - MER20 DNA MER1_type -18 201 166 2208 124 3 0 chr10 126156783 126157089 -19432199 - AluSx SINE Alu -5 307 1 305 226 43 54 chr10 126157657 126157750 -19431538 + L1MC4 LINE L1 6614 6705 -1337 445 136 52 0 chr10 126157750 126157904 -19431384 + (TA)n Simple_repeat Simple_repeat 2 163 0 1152 218 50 26 chr10 126157905 126158319 -19430969 - MLT2B1 LTR ERVL -41 479 1 2248 126 120 3 chr10 126158319 126158621 -19430667 - ERVL-B1 LTR ERVL -7 5757 5399 315 0 0 0 chr10 126158621 126158656 -19430632 + (CA)n Simple_repeat Simple_repeat 2 36 0 2248 126 120 3 chr10 126158656 126158735 -19430553 - ERVL-B1 LTR ERVL -365 5399 5331 1389 58 0 0 chr10 126158741 126158915 -19430373 - L1PA5 LINE L1 -2 6152 5979 1505 59 0 0 chr10 126158915 126159102 -19430186 + L1P2 LINE L1 5584 5770 -384 4778 173 19 19 chr10 126159117 126159279 -19430009 - ERVL-B1 LTR ERVL -448 5316 5155 2236 190 12 12 chr10 126159279 126159705 -19429583 + MSTB LTR MaLR 1 426 0 4778 173 19 19 chr10 126159705 126160385 -19428903 - ERVL-B1 LTR ERVL -608 5156 4474 4980 162 33 27 chr10 126210387 126210546 -19378742 - L1M2 LINE L1 -743 6105 5948 2401 85 7 0 chr10 126210546 126210852 -19378436 - AluSx SINE Alu -4 308 1 4980 162 33 27 chr10 126210852 126211001 -19378287 - L1M2 LINE L1 -900 5948 5801 2154 110 72 32 chr10 126211001 126211347 -19377941 - THE1B LTR MaLR -2 362 3 4980 162 33 27 chr10 126211347 126212301 -19376987 - L1M2 LINE L1 -1047 5801 4949 2256 187 44 89 chr10 126212301 126212404 -19376884 - LTR9 LTR ERV1 0 779 673 2001 120 0 4 chr10 126212404 126212680 -19376608 + AluSq SINE Alu 2 276 -37 2256 187 44 89 chr10 126212680 126213247 -19376041 - LTR9 LTR ERV1 -106 673 3 10416 211 37 75 chr10 126213249 126216234 -19373054 - L1M2 LINE L1 -1896 4952 2176 729 179 0 37 chr10 126216234 126216368 -19372920 + FLAM_A SINE Alu 1 129 -4 10416 211 37 75 chr10 126216368 126218454 -19370834 - L1M2 LINE L1 -4672 2176 12 23 0 0 0 chr10 126218654 126218677 -19370611 + AT_rich Low_complexity Low_complexity 1 23 0 261 344 106 62 chr10 126218844 126219117 -19370171 - L2 LINE L2 -2 3270 2986 2278 78 0 32 chr10 126219393 126219702 -19369586 + AluY SINE Alu 3 301 -10 196 216 0 0 chr10 126220905 126220942 -19368346 - L2 LINE L2 -5 3308 3272 21 89 0 0 chr10 126221191 126221247 -19368041 + AT_rich Low_complexity Low_complexity 1 56 0 333 233 103 35 chr10 126221733 126221849 -19367439 - MIR SINE MIR -61 201 78 22 35 0 0 chr10 126221955 126221984 -19367304 + AT_rich Low_complexity Low_complexity 1 29 0 3073 157 27 39 chr10 126222742 126223449 -19365839 - L1MB3 LINE L1 -3 6237 5497 596 212 48 12 chr10 126224394 126224559 -19364729 - L1MC4 LINE L1 -412 7630 7460 2244 104 7 0 chr10 126225253 126225552 -19363736 - AluSg SINE Alu -9 301 1 4265 126 17 3 chr10 126226415 126227050 -19362238 - LTR9B LTR ERV1 0 644 1 426 144 0 41 chr10 126227669 126227766 -19361522 + L1ME3A LINE L1 5856 5948 -222 286 115 0 0 chr10 126228171 126228223 -19361065 - L1MB4 LINE L1 0 6180 6129 448 244 157 39 chr10 126228270 126228499 -19360789 - HAL1 LINE L1 -846 1661 1406 21 0 0 0 chr10 126228540 126228561 -19360727 + AT_rich Low_complexity Low_complexity 1 21 0 2127 128 3 0 chr10 126229287 126229593 -19359695 - AluSx SINE Alu -5 307 1 12196 199 40 31 chr10 126230758 126233221 -19356067 - L1MB3 LINE L1 -960 5243 2803 2221 108 3 0 chr10 126233221 126233518 -19355770 - AluSg SINE Alu -12 298 1 12196 199 40 31 chr10 126233518 126235584 -19353704 - L1MB3 LINE L1 -3400 2803 684 195 42 0 0 chr10 126235584 126235608 -19353680 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 12196 199 40 31 chr10 126235608 126235720 -19353568 - L1MB3 LINE L1 -5519 684 574 24887 142 24 15 chr10 126238023 126243332 -19345956 - L1PA8A LINE L1 -5 6441 1078 1655 149 75 3 chr10 126243329 126243664 -19345624 - L1M2 LINE L1 -3952 2897 2539 * 2066 185 7 27 chr10 126243666 126244104 -19345184 + L1 LINE L1 4020 4448 -1698 442 333 61 45 chr10 126244111 126244423 -19344865 - L1M4b LINE L1 -4340 2798 2482 1762 263 68 11 chr10 126244596 126245434 -19343854 - L1M4b LINE L1 -4551 2408 1532 218 691 0 7 chr10 126245435 126245584 -19343704 + C-rich Low_complexity Low_complexity 1 148 0 2203 110 3 0 chr10 126245585 126245877 -19343411 - AluSq SINE Alu -20 293 1 2340 77 13 0 chr10 126245911 126246210 -19343078 - AluY SINE Alu -8 303 1 748 284 37 14 chr10 126246340 126246558 -19342730 + MER58A DNA MER1_type 1 223 -1 21 0 0 0 chr10 126247147 126247168 -19342120 + AT_rich Low_complexity Low_complexity 1 21 0 10481 29 1 2 chr10 126248208 126250231 -19339057 + L1PA3 LINE L1 4132 6154 -1 28 71 0 0 chr10 126250276 126250332 -19338956 + AT_rich Low_complexity Low_complexity 1 56 0 3599 164 33 64 chr10 126250424 126251279 -19338009 - L1MA6 LINE L1 -3 6297 5470 3386 275 42 28 chr10 126251278 126253198 -19336090 - L1 LINE L1 -3249 3857 1967 * 2255 84 0 3 chr10 126253198 126253484 -19335804 - AluY SINE Alu -18 293 9 3386 275 42 28 chr10 126253484 126254568 -19334720 - L1 LINE L1 -5139 1967 7 322 293 68 58 chr10 126254996 126255187 -19334101 + MIR SINE MIR 66 258 -4 2286 90 0 10 chr10 126255618 126255919 -19333369 - AluSx SINE Alu -14 298 1 713 262 86 25 chr10 126256961 126257205 -19332083 + MIR SINE MIR 3 261 -1 505 270 17 69 chr10 126257490 126257664 -19331624 + MER5B DNA MER1_type 7 171 -7 915 223 115 50 chr10 126257722 126258045 -19331243 + MER2 DNA MER2_type 1 344 0 424 256 80 45 chr10 126258138 126258314 -19330974 - MIR SINE MIR -8 254 73 2051 108 0 54 chr10 126258974 126259289 -19329999 - AluSg SINE Alu -10 300 3 15134 157 29 28 chr10 126259325 126259927 -19329361 - L1MA1 LINE L1 0 7721 7121 1924 154 9 26 chr10 126259927 126260270 -19329018 - MER1B DNA MER1_type 0 337 1 15134 157 29 28 chr10 126260270 126262274 -19327014 - L1MA1 LINE L1 -600 7121 5105 1990 128 3 3 chr10 126262274 126262571 -19326717 - AluSc SINE Alu -12 297 1 15134 157 29 28 chr10 126262571 126264370 -19324918 - L1MA1 LINE L1 -2616 5105 3310 18862 171 25 13 chr10 126264370 126267828 -19321460 - L1M1 LINE L1 -4059 3506 5 1215 201 73 11 chr10 126267813 126268086 -19321202 - L1MB5 LINE L1 -87 6087 5798 * 542 165 43 9 chr10 126268083 126268198 -19321090 - L1MB5 LINE L1 -745 5438 5320 * 2013 184 10 7 chr10 126268211 126268619 -19320669 - L1MB3 LINE L1 0 6183 5775 242 143 0 0 chr10 126268619 126268654 -19320634 - L1MB5 LINE L1 -79 6095 6061 659 183 9 0 chr10 126268658 126268773 -19320515 - L1MB3 LINE L1 -397 5786 5671 1144 229 64 3 chr10 126268780 126269094 -19320194 - L1MB3 LINE L1 -755 5391 5059 25 31 0 0 chr10 126269861 126269893 -19319395 + AT_rich Low_complexity Low_complexity 1 32 0 217 123 18 53 chr10 126269931 126269988 -19319300 + (TATATG)n Simple_repeat Simple_repeat 5 59 0 352 284 114 91 chr10 126270007 126270111 -19319177 + MIR SINE MIR 3 103 -159 2119 113 3 0 chr10 126270111 126270403 -19318885 - AluSx SINE Alu -19 293 1 352 284 114 91 chr10 126270403 126270552 -19318736 + MIR SINE MIR 103 262 0 12693 181 37 28 chr10 126270961 126272186 -19317102 - L1MA4 LINE L1 -14 7705 6492 2552 74 0 0 chr10 126272186 126272495 -19316793 + AluSc SINE Alu 1 309 0 12693 181 37 28 chr10 126272495 126273859 -19315429 - L1MA4 LINE L1 -1227 6492 5142 316 53 0 35 chr10 126273859 126273916 -19315372 + (TTTTG)n Simple_repeat Simple_repeat 2 56 0 12693 181 37 28 chr10 126273916 126274782 -19314506 - L1MA4 LINE L1 -2577 5142 4285 1868 116 0 18 chr10 126274782 126275057 -19314231 + AluSp SINE Alu 37 306 -7 12693 181 37 28 chr10 126275057 126276157 -19313131 - L1MA4 LINE L1 -3434 4285 3107 1082 126 132 0 chr10 126276169 126276343 -19312945 - MER30 DNA MER1_type 0 230 34 4861 229 63 16 chr10 126276353 126277679 -19311609 - L1MA4 LINE L1 -4463 3102 1714 209 164 18 55 chr10 126280243 126280298 -19308990 + L2 LINE L2 3261 3313 0 324 324 54 14 chr10 126280755 126280903 -19308385 - MIR SINE MIR -101 161 8 23 0 0 0 chr10 126281765 126281788 -19307500 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr10 126282184 126282209 -19307079 + AT_rich Low_complexity Low_complexity 1 25 0 2687 221 110 36 chr10 126282555 126282784 -19306504 - L1MC4 LINE L1 -169 7873 7662 522 88 9 106 chr10 126282784 126282897 -19306391 - L1PA8 LINE L1 0 6172 6071 2687 221 110 36 chr10 126282897 126283437 -19305851 - L1MC4 LINE L1 -380 7662 7163 213 39 0 0 chr10 126283437 126283463 -19305825 + (TATG)n Simple_repeat Simple_repeat 3 28 0 2687 221 110 36 chr10 126283463 126283689 -19305599 - L1MC4 LINE L1 -879 7163 6648 428 274 9 9 chr10 126283716 126283829 -19305459 - MER58 DNA MER1_type -101 114 2 707 171 55 17 chr10 126284473 126284654 -19304634 - L1MA8 LINE L1 -8 6283 6096 42364 34 22 2 chr10 126284654 126290673 -19298615 - L1PA2 LINE L1 -2 6153 8 1251 190 23 82 chr10 126290674 126290846 -19298442 - L1MA7 LINE L1 -184 6343 6201 2197 117 0 0 chr10 126290846 126291145 -19298143 - AluSx SINE Alu -13 299 1 1251 190 23 82 chr10 126291145 126291324 -19297964 - L1MA7 LINE L1 -326 6201 6013 11736 215 36 26 chr10 126291594 126292028 -19297260 - L1MA7 LINE L1 -527 6000 5572 2274 134 31 14 chr10 126292028 126292386 -19296902 + THE1B LTR MaLR 1 364 0 11391 92 10 2 chr10 126292386 126293954 -19295334 + THE1B-int LTR MaLR 1 1580 0 2253 128 33 19 chr10 126293954 126294313 -19294975 + THE1B LTR MaLR 1 364 0 11736 215 36 26 chr10 126294313 126296468 -19292820 - L1MA7 LINE L1 -955 5572 3440 186 43 0 0 chr10 126296468 126296491 -19292797 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 11736 215 36 26 chr10 126296491 126296573 -19292715 - L1MA7 LINE L1 -3087 3440 3360 716 68 17 17 chr10 126296573 126296691 -19292597 + (TTCC)n Simple_repeat Simple_repeat 2 119 0 11736 215 36 26 chr10 126296691 126298430 -19290858 - L1MA7 LINE L1 -3167 3360 1448 1086 192 10 5 chr10 126298430 126298628 -19290660 - AluJo SINE Alu -9 303 105 1050 178 0 0 chr10 126298629 126298792 -19290496 - AluJo SINE Alu -139 173 11 1948 277 75 33 chr10 126298798 126299278 -19290010 - L1M2c LINE L1 -4523 1512 1053 1844 157 50 0 chr10 126299278 126299615 -19289673 + THE1A LTR MaLR 1 354 -1 1948 277 75 33 chr10 126299615 126300679 -19288609 - L1M2c LINE L1 -4982 1053 317 248 320 65 33 chr10 126300726 126300879 -19288409 - L1M2c LINE L1 -5501 454 297 2169 88 0 14 chr10 126301976 126302273 -19287015 - AluY SINE Alu -18 293 1 3743 216 39 57 chr10 126302488 126303396 -19285892 - L1MB7 LINE L1 -10 6174 5251 2037 99 3 72 chr10 126303396 126303729 -19285559 - AluSx SINE Alu -2 310 1 3743 216 39 57 chr10 126303729 126305007 -19284281 - L1MB7 LINE L1 -933 5251 4013 326 300 10 0 chr10 126305047 126305147 -19284141 - L1M4 LINE L1 -1275 4871 4771 642 209 28 92 chr10 126305168 126305451 -19283837 - L1MB7 LINE L1 -2156 3990 3726 21 36 0 0 chr10 126305684 126305712 -19283576 + AT_rich Low_complexity Low_complexity 1 28 0 241 271 0 0 chr10 126305734 126305782 -19283506 + L1P3 LINE L1 1023 1070 -4805 22 0 0 0 chr10 126306143 126306165 -19283123 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr10 126306201 126306224 -19283064 + AT_rich Low_complexity Low_complexity 1 23 0 300 284 30 47 chr10 126306393 126306562 -19282726 - L1ME2 LINE L1 -22 6142 5977 1170 254 23 3 chr10 126306617 126306916 -19282372 - MER58B DNA MER1_type -36 305 1 2458 265 55 49 chr10 126306936 126308476 -19280812 - L1ME2 LINE L1 -226 5938 4377 1600 127 3 58 chr10 126308518 126308810 -19280478 - LTR22B LTR ERVK -3 489 214 2270 37 0 0 chr10 126308825 126309096 -19280192 - L1PA3 LINE L1 -3 6152 5882 1902 12 0 49 chr10 126309096 126309340 -19279948 + L1PA3 LINE L1 5663 5894 -261 1405 115 42 0 chr10 126309340 126309557 -19279731 - LTR22B LTR ERVK -266 226 1 1918 166 115 2 chr10 126309614 126310023 -19279265 - L1MB5 LINE L1 -8 6166 5712 291 220 21 50 chr10 126310541 126310682 -19278606 - L1P LINE L1 -3756 2390 2254 22 0 0 0 chr10 126310882 126310904 -19278384 + AT_rich Low_complexity Low_complexity 1 22 0 6166 178 87 23 chr10 126310971 126311383 -19277905 - L1MA7 LINE L1 0 6291 5907 2062 86 41 28 chr10 126311383 126311674 -19277614 + AluSg SINE Alu 1 295 -15 6166 178 87 23 chr10 126311674 126311690 -19277598 - L1MA7 LINE L1 -384 5907 5893 399 89 0 0 chr10 126311690 126311746 -19277542 + (TA)n Simple_repeat Simple_repeat 2 57 0 6166 178 87 23 chr10 126311746 126313457 -19275831 - L1MA7 LINE L1 -398 5893 4009 1426 270 35 12 chr10 126313503 126313933 -19275355 - L1M3e LINE L1 -6590 440 1 236 367 82 35 chr10 126315714 126315970 -19273318 - L2 LINE L2 -565 2749 2482 678 288 93 0 chr10 126316270 126316485 -19272803 - MIR SINE MIR 0 262 28 21 0 0 0 chr10 126316654 126316675 -19272613 + AT_rich Low_complexity Low_complexity 1 21 0 2959 136 38 2 chr10 126317021 126317520 -19271768 - L1PA16 LINE L1 -8 6158 5642 22 0 0 0 chr10 126318147 126318169 -19271119 + AT_rich Low_complexity Low_complexity 1 22 0 29 0 0 0 chr10 126318200 126318229 -19271059 + AT_rich Low_complexity Low_complexity 1 29 0 750 253 7 0 chr10 126318512 126318658 -19270630 + MER45A DNA AcHobo 2 148 -30 497 252 109 26 chr10 126319924 126320154 -19269134 + L1MCc LINE L1 33 281 -6142 7107 179 42 6 chr10 126320519 126321995 -19267293 - L1PA16 LINE L1 -1638 4508 2980 1849 124 53 0 chr10 126321988 126322364 -19266924 + L1P4 LINE L1 5037 5432 -736 * 424 173 0 25 chr10 126322351 126322432 -19266856 + L1P LINE L1 4942 5020 -1126 * 3410 199 9 1 chr10 126322436 126323105 -19266183 - L1PA16 LINE L1 -3332 2814 2141 754 322 26 4 chr10 126323330 126323560 -19265728 + ERVL LTR ERVL 2033 2267 -3497 1059 281 36 43 chr10 126324199 126324591 -19264697 - MER20B DNA MER1_type -347 436 48 315 0 0 0 chr10 126325411 126325446 -19263842 + (T)n Simple_repeat Simple_repeat 1 35 0 2081 125 10 0 chr10 126325625 126325922 -19263366 - AluSx SINE Alu -12 300 1 727 299 126 21 chr10 126326446 126326780 -19262508 + MLT1J2 LTR MaLR 56 424 -26 23 0 0 0 chr10 126326986 126327009 -19262279 + AT_rich Low_complexity Low_complexity 1 23 0 508 295 93 47 chr10 126327726 126327865 -19261423 - L1ME3 LINE L1 -271 5891 5760 4952 39 0 0 chr10 126327865 126328459 -19260829 - L1PA4 LINE L1 -2 6153 5560 508 295 93 47 chr10 126328459 126328749 -19260539 - L1ME3 LINE L1 -402 5760 5442 237 278 100 33 chr10 126328917 126329097 -19260191 - L1ME3 LINE L1 -872 5274 5083 319 253 86 31 chr10 126329114 126329276 -19260012 - L1ME3 LINE L1 -2594 3552 3382 6133 189 25 50 chr10 126329280 126330153 -19259135 - L1MA5A LINE L1 0 6297 5404 2833 13 0 0 chr10 126330153 126330470 -19258818 - AluYb8 SINE Alu -1 317 1 6133 189 25 50 chr10 126330470 126332391 -19256897 - L1MA5A LINE L1 -893 5404 3652 2232 99 10 0 chr10 126332496 126332789 -19256499 - AluSc SINE Alu -13 296 1 1958 136 3 14 chr10 126332911 126333205 -19256083 - AluSg SINE Alu -19 291 1 77 80 0 0 chr10 126333356 126333531 -19255757 + AT_rich Low_complexity Low_complexity 1 175 0 24 53 0 0 chr10 126333887 126333925 -19255363 + AT_rich Low_complexity Low_complexity 1 38 0 26 30 0 0 chr10 126334024 126334057 -19255231 + AT_rich Low_complexity Low_complexity 1 33 0 1416 257 19 92 chr10 126334076 126334716 -19254572 + MLT1E LTR MaLR 1 593 0 3037 258 57 117 chr10 126335561 126338393 -19250895 - L1MC4a LINE L1 -677 7131 4475 22 56 0 0 chr10 126338561 126338597 -19250691 + AT_rich Low_complexity Low_complexity 1 36 0 1085 324 22 29 chr10 126339072 126339526 -19249762 + L1M3a LINE L1 2 452 -5503 2216 219 70 17 chr10 126339877 126342209 -19247079 + L1PA15 LINE L1 539 2746 -3601 2217 108 0 3 chr10 126342209 126342514 -19246774 - AluSq SINE Alu -9 304 1 2216 219 70 17 chr10 126342514 126345210 -19244078 + L1PA15 LINE L1 2746 6342 -5 1181 119 26 0 chr10 126345219 126345412 -19243876 + L1MA3 LINE L1 6107 6304 -1 1512 170 29 4 chr10 126345422 126345733 -19243555 + AluJo SINE Alu 1 318 0 4031 171 26 42 chr10 126345744 126347067 -19242221 + L1MA6 LINE L1 4785 6084 -216 21 0 0 0 chr10 126347214 126347235 -19242053 + AT_rich Low_complexity Low_complexity 1 21 0 27 96 0 0 chr10 126347464 126347547 -19241741 + AT_rich Low_complexity Low_complexity 1 83 0 24 0 0 0 chr10 126347573 126347597 -19241691 + AT_rich Low_complexity Low_complexity 1 24 0 3568 233 78 23 chr10 126348865 126348891 -19240397 - L1ME LINE L1 -546 5620 5597 2054 128 7 0 chr10 126348891 126349188 -19240100 - AluSq SINE Alu -14 299 1 3568 233 78 23 chr10 126349188 126350854 -19238434 - L1ME LINE L1 -569 5597 3837 1170 260 67 36 chr10 126350847 126351619 -19237669 - L1PA8A LINE L1 -345 5815 4082 * 2252 82 0 13 chr10 126351951 126352255 -19237033 + AluY SINE Alu 1 300 -11 22 0 0 0 chr10 126352411 126352433 -19236855 + AT_rich Low_complexity Low_complexity 1 22 0 379 288 27 20 chr10 126352437 126352583 -19236705 - L1ME LINE L1 -2932 3214 3068 1008 141 6 0 chr10 126352663 126352826 -19236462 - L1PA15 LINE L1 -1 6164 6001 21 0 0 0 chr10 126352843 126352864 -19236424 + AT_rich Low_complexity Low_complexity 1 21 0 942 203 0 30 chr10 126352910 126353112 -19236176 + MER20 DNA MER1_type 24 219 0 680 250 37 120 chr10 126353112 126353291 -19235997 - L1MC5 LINE L1 -624 7337 7145 2164 85 30 10 chr10 126353291 126353596 -19235692 + AluSp SINE Alu 2 312 -1 680 250 37 120 chr10 126353596 126353908 -19235380 - L1MC5 LINE L1 -816 7145 6887 1162 219 28 28 chr10 126354176 126354496 -19234792 - MER33 DNA MER1_type 0 324 5 484 374 5 15 chr10 126356071 126356269 -19233019 + MER91A DNA MER1_type 1 196 0 726 253 93 0 chr10 126356460 126356654 -19232634 - MIR SINE MIR -1 261 50 357 252 50 63 chr10 126356721 126356880 -19232408 + L1M4 LINE L1 4465 4621 -1525 1322 180 149 55 chr10 126357119 126357199 -19232089 + MSTD LTR MaLR 1 72 -324 1903 68 57 15 chr10 126357199 126357462 -19231826 - AluY SINE Alu -11 300 27 1322 180 149 55 chr10 126357462 126357743 -19231545 + MSTD LTR MaLR 72 396 0 25 65 0 0 chr10 126358791 126358837 -19230451 + AT_rich Low_complexity Low_complexity 1 46 0 199 356 178 8 chr10 126358943 126359061 -19230227 - L2 LINE L2 -1 3271 3134 397 332 76 53 chr10 126359173 126359609 -19229679 - L2 LINE L2 -191 3081 2630 241 290 115 55 chr10 126359970 126360153 -19229135 - MIR SINE MIR -3 259 66 2428 159 5 31 chr10 126361034 126361480 -19227808 - Tigger2a DNA MER2_type 0 434 1 228 232 176 28 chr10 126361580 126361722 -19227566 - L1ME4a LINE L1 0 6121 5959 1093 205 111 20 chr10 126361731 126362029 -19227259 + MLT1D LTR MaLR 1 325 -180 2168 204 36 22 chr10 126362030 126362526 -19226762 - L1MC4a LINE L1 -659 7149 6647 1773 315 169 48 chr10 126362576 126364437 -19224851 + L2 LINE L2 793 2930 -342 468 0 0 0 chr10 126364441 126364493 -19224795 + (TC)n Simple_repeat Simple_repeat 2 53 0 1070 229 14 0 chr10 126364656 126364866 -19224422 - MER58A DNA MER1_type -1 223 11 296 218 27 82 chr10 126364896 126365006 -19224282 + L2 LINE L2 3121 3224 -89 283 270 102 26 chr10 126365440 126365666 -19223622 - L1 LINE L1 -3773 2373 2131 28 61 0 0 chr10 126365685 126365734 -19223554 + AT_rich Low_complexity Low_complexity 1 49 0 227 325 24 18 chr10 126366250 126366416 -19222872 + L1M4 LINE L1 4147 4313 -1833 21 0 0 0 chr10 126366575 126366596 -19222692 + AT_rich Low_complexity Low_complexity 1 21 0 243 0 0 0 chr10 126366894 126366921 -19222367 + (TTTTA)n Simple_repeat Simple_repeat 2 28 0 2039 96 4 0 chr10 126366948 126367220 -19222068 - AluSx SINE Alu -39 273 1 1292 116 10 15 chr10 126367439 126367638 -19221650 + AluSg/x SINE Alu 113 310 -2 423 0 0 0 chr10 126367686 126367733 -19221555 + (TG)n Simple_repeat Simple_repeat 2 48 0 1895 194 25 43 chr10 126367770 126368259 -19221029 - L1MB7 LINE L1 0 6184 5705 23 33 0 0 chr10 126369016 126369046 -19220242 + AT_rich Low_complexity Low_complexity 1 30 0 311 259 25 0 chr10 126369623 126369704 -19219584 - MIR SINE MIR -1 261 179 24 0 0 0 chr10 126369727 126369751 -19219537 + AT_rich Low_complexity Low_complexity 1 24 0 626 294 90 46 chr10 126369786 126370364 -19218924 - L1ME4a LINE L1 -288 5874 5255 2136 212 48 27 chr10 126370444 126371001 -19218287 + L1PA14 LINE L1 2680 3248 -2898 333 130 0 0 chr10 126371003 126371057 -19218231 - MADE1 DNA Mariner -26 54 1 405 0 0 0 chr10 126371069 126371114 -19218174 + (CAA)n Simple_repeat Simple_repeat 1 45 0 528 244 0 0 chr10 126371119 126371238 -19218050 + L1PA14 LINE L1 3523 3641 -2505 1812 209 137 71 chr10 126371243 126372004 -19217284 + LTR1B LTR ERV1 3 813 -13 8547 174 23 0 chr10 126372020 126374477 -19214811 + L1PA14 LINE L1 3643 6152 -9 342 309 68 25 chr10 126374563 126374725 -19214563 - L1ME4a LINE L1 -1073 5073 4905 3646 195 27 17 chr10 126374746 126375550 -19213738 - L1MA10 LINE L1 0 6334 5523 6842 184 36 37 chr10 126375551 126375825 -19213463 - L1MA10 LINE L1 -791 5355 5082 3044 28 0 0 chr10 126375825 126376180 -19213108 + L1PA3 LINE L1 5800 6154 -1 6842 184 36 37 chr10 126376180 126377510 -19211778 - L1MA10 LINE L1 -1064 5082 3752 6807 70 5 2 chr10 126377511 126378864 -19210424 + L1PA7 LINE L1 4796 6151 -3 323 350 104 16 chr10 126378886 126379069 -19210219 + L2 LINE L2 1041 1239 -2075 584 280 101 19 chr10 126379210 126379417 -19209871 - MER52A LTR ERV1 -450 1305 1082 * 757 181 96 181 chr10 126379405 126379737 -19209551 - MER52A LTR ERV1 -785 970 667 992 260 113 24 chr10 126379746 126380196 -19209092 + L2 LINE L2 1268 1757 -1557 8817 43 6 1 chr10 126381115 126382181 -19207107 + MER11C LTR ERVK 1 1071 0 1125 294 128 30 chr10 126382196 126382804 -19206484 + L2 LINE L2 1959 2626 -688 244 370 84 0 chr10 126382822 126382941 -19206347 + L2 LINE L2 2913 3041 -272 272 268 134 0 chr10 126383013 126383095 -19206193 + L2 LINE L2 3184 3276 -37 25 51 0 0 chr10 126383400 126383439 -19205849 + AT_rich Low_complexity Low_complexity 1 39 0 303 241 71 27 chr10 126383798 126383910 -19205378 + L1ME4a LINE L1 5973 6089 -32 22 0 0 0 chr10 126383933 126383955 -19205333 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr10 126384446 126384470 -19204818 + AT_rich Low_complexity Low_complexity 1 24 0 2247 104 0 0 chr10 126384552 126384851 -19204437 + AluSc SINE Alu 4 302 -7 23 0 0 0 chr10 126385238 126385261 -19204027 + AT_rich Low_complexity Low_complexity 1 23 0 1673 169 63 3 chr10 126385714 126386046 -19203242 - L1MB4 LINE L1 -1 6179 5828 203 152 0 0 chr10 126387235 126387268 -19202020 + GA-rich Low_complexity Low_complexity 1 33 0 235 389 0 9 chr10 126387396 126387509 -19201779 - MIR SINE MIR -115 147 36 23 54 0 0 chr10 126389930 126389967 -19199321 + AT_rich Low_complexity Low_complexity 1 37 0 23 0 0 0 chr10 126390693 126390716 -19198572 + AT_rich Low_complexity Low_complexity 1 23 0 225 274 129 40 chr10 126391907 126392031 -19197257 - MER5A DNA MER1_type -12 177 43 338 317 120 12 chr10 126392352 126392573 -19196715 + MIR SINE MIR 9 254 -8 27 29 0 0 chr10 126392574 126392608 -19196680 + AT_rich Low_complexity Low_complexity 1 34 0 26 107 0 0 chr10 126392658 126392761 -19196527 + AT_rich Low_complexity Low_complexity 1 103 0 23 86 0 0 chr10 126394506 126394564 -19194724 + AT_rich Low_complexity Low_complexity 1 58 0 7922 189 11 32 chr10 126394564 126396912 -19192376 - L1MB1 LINE L1 -186 6684 4386 577 196 1 3 chr10 126396984 126397113 -19192175 - L1MA8 LINE L1 -158 6147 6007 2126 218 43 10 chr10 126397127 126397704 -19191584 - L1MB1 LINE L1 -2451 4397 3802 1533 234 62 0 chr10 126397726 126398115 -19191173 - L1MB1 LINE L1 -4255 2594 2182 280 271 0 83 chr10 126398116 126398260 -19191028 + L1MD2 LINE L1 5964 6095 -264 260 305 212 20 chr10 126398442 126398593 -19190695 + MER5A DNA MER1_type 10 189 0 412 313 48 7 chr10 126399160 126399307 -19189981 + MIR SINE MIR 84 236 -26 1443 257 82 10 chr10 126399562 126400242 -19189046 - L1M4 LINE L1 -3043 3103 2375 269 292 47 94 chr10 126401565 126401736 -19187552 + MIR SINE MIR 2 164 -98 1289 219 45 99 chr10 126401737 126402276 -19187012 - MLT1E1 LTR MaLR -2 652 69 21 36 0 0 chr10 126402518 126402546 -19186742 + AT_rich Low_complexity Low_complexity 1 28 0 261 0 0 0 chr10 126403804 126403833 -19185455 + (CA)n Simple_repeat Simple_repeat 2 30 0 21 0 0 0 chr10 126403938 126403959 -19185329 + AT_rich Low_complexity Low_complexity 1 21 0 570 223 0 0 chr10 126404314 126404417 -19184871 + MER58B DNA MER1_type 234 336 -5 26 50 0 0 chr10 126404602 126404642 -19184646 + AT_rich Low_complexity Low_complexity 1 40 0 29 90 0 0 chr10 126404763 126404841 -19184447 + AT_rich Low_complexity Low_complexity 1 78 0 248 320 65 33 chr10 126405681 126405834 -19183454 + L1 LINE L1 297 454 -5501 1962 281 61 33 chr10 126405881 126406945 -19182343 + L1 LINE L1 317 1047 -4988 1871 154 50 0 chr10 126406945 126407282 -19182006 - THE1A LTR MaLR -1 354 1 1962 281 61 33 chr10 126407282 126407762 -19181526 + L1 LINE L1 1047 1512 -4523 1033 184 0 0 chr10 126407768 126407931 -19181357 + AluJo SINE Alu 11 173 -139 1086 192 10 5 chr10 126407932 126408130 -19181158 + AluJo SINE Alu 105 303 -9 9035 235 35 40 chr10 126408130 126410056 -19179232 + L1MA7 LINE L1 1448 3383 -3144 186 43 0 0 chr10 126410056 126410079 -19179209 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 9035 235 35 40 chr10 126410079 126412234 -19177054 + L1MA7 LINE L1 3383 5548 -979 2255 128 33 19 chr10 126412234 126412593 -19176695 - THE1B LTR MaLR 0 364 1 11300 94 10 2 chr10 126412593 126414160 -19175128 - THE1B-int LTR MaLR 0 1580 1 2274 134 31 14 chr10 126414160 126414518 -19174770 - THE1B LTR MaLR 0 364 1 9035 235 35 40 chr10 126414518 126414952 -19174336 + L1MA7 LINE L1 5545 6000 -527 1251 190 23 82 chr10 126415222 126415401 -19173887 + L1MA7 LINE L1 6013 6162 -365 2192 114 0 0 chr10 126415401 126415698 -19173590 + AluSx SINE Alu 1 297 -15 1251 190 23 82 chr10 126415698 126415870 -19173418 + L1MA7 LINE L1 6162 6343 -184 41878 35 26 2 chr10 126415871 126421870 -19167418 + L1PA3 LINE L1 8 6155 0 3049 209 66 4 chr10 126422066 126422750 -19166538 + L1MB8 LINE L1 5443 6168 -10 3180 254 34 10 chr10 126423284 126424364 -19164924 + L1 LINE L1 2433 3538 -2496 764 103 0 8 chr10 126424425 126424551 -19164737 + (GGAA)n Simple_repeat Simple_repeat 3 127 0 22 0 0 0 chr10 126425214 126425236 -19164052 + AT_rich Low_complexity Low_complexity 1 22 0 26 0 0 0 chr10 126425284 126425310 -19163978 + AT_rich Low_complexity Low_complexity 1 26 0 26 50 0 0 chr10 126425810 126425850 -19163438 + AT_rich Low_complexity Low_complexity 1 40 0 24 32 0 0 chr10 126427164 126427195 -19162093 + AT_rich Low_complexity Low_complexity 1 31 0 356 285 113 23 chr10 126427745 126428047 -19161241 - L1P LINE L1 -2341 3805 3477 1224 210 35 0 chr10 126428090 126428380 -19160908 - L1MA8 LINE L1 -1 6290 5991 26 30 0 0 chr10 126428394 126428427 -19160861 + AT_rich Low_complexity Low_complexity 1 33 0 31290 103 14 60 chr10 126428482 126434934 -19154354 - L1PA7 LINE L1 0 6154 12 205 191 5 113 chr10 126435182 126435376 -19153912 + T-rich Low_complexity Low_complexity 5 177 0 2316 97 0 0 chr10 126435383 126435681 -19153607 - AluY SINE Alu -13 298 1 427 164 36 0 chr10 126435697 126435807 -19153481 + L1MA7 LINE L1 6178 6291 0 5496 157 13 9 chr10 126435845 126436919 -19152369 - L1PA15 LINE L1 0 7603 6528 * 9086 235 36 39 chr10 126436916 126440057 -19149231 - L1PA15 LINE L1 -1837 5747 2635 886 299 34 10 chr10 126440073 126440367 -19148921 - L1PA15 LINE L1 -7271 310 10 2055 131 0 0 chr10 126440396 126440694 -19148594 - AluSc SINE Alu -11 298 1 22 94 0 0 chr10 126441392 126441456 -19147832 + AT_rich Low_complexity Low_complexity 1 64 0 1504 142 19 78 chr10 126442152 126442519 -19146769 - MER4A LTR ERV1 0 664 261 541 163 0 10 chr10 126442519 126442617 -19146671 - MER4A LTR ERV1 -566 98 2 15152 116 55 29 chr10 126442623 126443289 -19145999 - MER4A-int LTR ERV1 -1 6597 5950 2138 100 10 0 chr10 126443289 126443579 -19145709 - AluSp SINE Alu -20 293 1 15152 116 55 29 chr10 126443579 126443659 -19145629 - MER4A-int LTR ERV1 -648 5950 5874 2189 118 0 16 chr10 126443659 126443972 -19145316 - AluSq SINE Alu -5 308 1 15152 116 55 29 chr10 126443972 126445504 -19143784 - MER4A-int LTR ERV1 -724 5874 4235 1003 88 0 0 chr10 126445504 126445641 -19143647 + L1PA7 LINE L1 6015 6151 -3 15152 116 55 29 chr10 126445641 126446052 -19143236 - MER4A-int LTR ERV1 -2363 4235 3836 11441 124 150 113 chr10 126446050 126449600 -19139688 - MER4A-int LTR ERV1 -2917 3681 1 * 1721 134 161 75 chr10 126449603 126449975 -19139313 - MER4A LTR ERV1 0 664 261 579 141 0 10 chr10 126449975 126450074 -19139214 - MER4A LTR ERV1 -566 98 1 628 321 101 0 chr10 126450268 126450477 -19138811 + MIR SINE MIR 33 262 0 12620 164 40 13 chr10 126450681 126452056 -19137232 + Tigger1 DNA MER2_type 2 1466 -952 2534 121 33 19 chr10 126452056 126452478 -19136810 + MSTA LTR MaLR 1 428 0 12620 164 40 13 chr10 126452478 126453457 -19135831 + Tigger1 DNA MER2_type 1466 2418 0 22 0 0 0 chr10 126454024 126454046 -19135242 + AT_rich Low_complexity Low_complexity 1 22 0 33 66 0 0 chr10 126454428 126454489 -19134799 + AT_rich Low_complexity Low_complexity 1 61 0 36 53 0 0 chr10 126455239 126455296 -19133992 + AT_rich Low_complexity Low_complexity 1 57 0 425 306 119 51 chr10 126455296 126455607 -19133681 - L2 LINE L2 0 3313 2982 1607 98 27 4 chr10 126455670 126455895 -19133393 - MER30 DNA MER1_type 0 230 1 348 304 73 26 chr10 126456123 126456314 -19132974 + L2 LINE L2 3114 3313 0 21 0 0 0 chr10 126457535 126457556 -19131732 + AT_rich Low_complexity Low_complexity 1 21 0 1322 338 108 41 chr10 126458385 126459763 -19129525 + L2 LINE L2 1752 3227 -86 353 260 130 18 chr10 126460158 126460327 -19128961 - L1MDa LINE L1 -3901 2639 2452 526 247 81 16 chr10 126460894 126461080 -19128208 - L1MDa LINE L1 -6177 544 347 338 338 93 18 chr10 126461214 126461439 -19127849 - MIR SINE MIR -16 246 5 24 32 0 0 chr10 126461763 126461794 -19127494 + AT_rich Low_complexity Low_complexity 1 31 0 357 238 12 100 chr10 126462472 126462632 -19126656 + MER103 DNA DNA 2 147 -19 535 307 39 7 chr10 126462815 126462968 -19126320 - MER91A DNA MER1_type -22 174 17 1051 231 9 5 chr10 126463086 126463307 -19125981 - MER58A DNA MER1_type -2 222 1 641 285 186 22 chr10 126463309 126463632 -19125656 - L3 LINE CR1 -108 1469 1094 2038 101 11 0 chr10 126463877 126464189 -19125099 - AluSx SINE Alu 0 317 3 1960 210 56 0 chr10 126464899 126465308 -19123980 - MSTB1 LTR MaLR 0 432 1 2461 228 225 14 chr10 126465308 126466616 -19122672 - MSTB1-int LTR MaLR 0 1651 1 2195 168 68 15 chr10 126466616 126467026 -19122262 - MSTB1 LTR MaLR 0 432 1 24 77 0 0 chr10 126467099 126467151 -19122137 + AT_rich Low_complexity Low_complexity 1 52 0 1757 330 48 54 chr10 126467226 126468702 -19120586 - HERV16 LTR ERVL -2670 2326 816 1413 276 30 12 chr10 126469428 126469855 -19119433 - LTR16B LTR ERVL -11 453 19 1809 164 3 7 chr10 126469855 126470159 -19119129 - AluJb SINE Alu -9 303 1 555 165 0 24 chr10 126470508 126470635 -19118653 + CT-rich Low_complexity Low_complexity 1 124 0 764 103 0 8 chr10 126470738 126470864 -19118424 + (TTCC)n Simple_repeat Simple_repeat 3 127 0 3180 254 34 10 chr10 126470925 126472005 -19117283 - L1 LINE L1 -2496 3650 2545 3049 209 66 4 chr10 126472539 126473223 -19116065 - L1MB8 LINE L1 -10 6168 5443 43575 37 5 2 chr10 126473419 126479554 -19109734 - L1PA3 LINE L1 0 6155 3 207 349 115 21 chr10 126480086 126480278 -19109010 + L2 LINE L2 2297 2506 -808 3180 231 52 21 chr10 126480527 126481602 -19107686 - L1ME1 LINE L1 -18 6148 5021 1759 152 64 9 chr10 126481602 126481932 -19107356 + MER7A DNA MER2_type 1 346 0 3180 231 52 21 chr10 126481932 126482106 -19107182 - L1ME1 LINE L1 -1145 5021 4854 1240 51 6 0 chr10 126482766 126482951 -19106337 + L1PA5 LINE L1 5987 6172 0 2200 102 7 3 chr10 126483271 126483564 -19105724 + AluSg1 SINE Alu 1 294 -15 947 277 67 9 chr10 126483752 126484329 -19104959 + L1ME3A LINE L1 5023 5634 -528 661 262 215 12 chr10 126484331 126484736 -19104552 + L1ME3A LINE L1 5673 6159 -11 284 289 16 47 chr10 126485432 126485471 -19103817 + MLT1L LTR MaLR 490 529 -86 1356 209 43 63 chr10 126485471 126485869 -19103419 - MLT1B LTR MaLR 0 390 1 284 289 16 47 chr10 126485869 126485957 -19103331 + MLT1L LTR MaLR 529 613 -2 204 233 0 0 chr10 126486683 126486726 -19102562 + CT-rich Low_complexity Low_complexity 2 44 0 228 195 35 81 chr10 126487002 126487089 -19102199 - MLT1J2 LTR MaLR -21 429 347 2189 148 72 15 chr10 126487111 126487516 -19101772 - MSTA LTR MaLR 0 428 1 1082 44 0 0 chr10 126487919 126488054 -19101234 + AluY SINE Alu 175 309 -2 203 217 22 0 chr10 126488054 126488100 -19101188 - L2 LINE L2 -2 3311 3265 22 0 0 0 chr10 126488147 126488169 -19101119 + AT_rich Low_complexity Low_complexity 1 22 0 524 259 60 38 chr10 126488710 126488895 -19100393 + MIR SINE MIR 68 256 -6 215 226 113 0 chr10 126489020 126489073 -19100215 + L3 LINE CR1 1054 1112 -465 2229 96 0 16 chr10 126489073 126489385 -19099903 + AluSc SINE Alu 1 307 -2 2403 196 42 25 chr10 126489389 126490004 -19099284 - L1M3 LINE L1 -619 5561 4927 524 67 27 0 chr10 126490004 126490079 -19099209 + MADE1 DNA Mariner 4 80 0 2403 196 42 25 chr10 126490079 126490252 -19099036 - L1M3 LINE L1 -1253 4927 4759 180 348 43 33 chr10 126490390 126490482 -19098806 - L2 LINE L2 -36 3236 3144 341 245 42 56 chr10 126490603 126490746 -19098542 + MLT1L LTR MaLR 142 282 -333 224 347 0 13 chr10 126491032 126491107 -19098181 - L2 LINE L2 -191 3081 3008 808 256 41 0 chr10 126491157 126491376 -19097912 - L1 LINE L1 -906 5240 5013 * 2528 187 39 4 chr10 126491370 126491883 -19097405 + L1MA9 LINE L1 5278 5808 -504 203 161 63 7 chr10 126491892 126492035 -19097253 + (TA)n Simple_repeat Simple_repeat 1 151 0 351 0 0 0 chr10 126492038 126492077 -19097211 + (CA)n Simple_repeat Simple_repeat 2 40 0 2168 160 60 25 chr10 126492078 126492548 -19096740 + L1MA9 LINE L1 5795 6280 -32 417 301 81 23 chr10 126493175 126493348 -19095940 - MLT1J LTR MaLR -318 193 11 201 354 39 23 chr10 126493393 126493523 -19095765 - L2 LINE L2 -663 2651 2520 1966 109 0 60 chr10 126494067 126494438 -19094850 - AluSx SINE Alu 0 353 1 25 31 0 0 chr10 126495906 126495938 -19093350 + AT_rich Low_complexity Low_complexity 1 32 0 2373 251 65 44 chr10 126496242 126497382 -19091906 + L1ME3A LINE L1 4992 6161 -9 1115 245 11 7 chr10 126497405 126497804 -19091484 + L1MDb LINE L1 586 1056 -5487 1296 214 37 3 chr10 126497820 126498114 -19091174 + L1MB7 LINE L1 5526 5829 -349 244 188 82 82 chr10 126498114 126498199 -19091089 + Tigger3(Golem) DNA MER2_type 1 85 -2944 * 5281 147 71 54 chr10 126498171 126498819 -19090469 + Tigger3(Golem) DNA MER2_type 1880 2558 -471 2100 113 0 0 chr10 126498819 126499154 -19090134 - AluSg SINE Alu 0 335 1 5281 147 71 54 chr10 126499154 126499634 -19089654 + Tigger3(Golem) DNA MER2_type 2558 3028 -1 1148 192 83 0 chr10 126499656 126499932 -19089356 + L1MB7 LINE L1 5852 6150 -34 1498 246 75 24 chr10 126499951 126500501 -19088787 + L1MDb LINE L1 1300 1877 -4663 2150 226 121 46 chr10 126500608 126500767 -19088521 - L1MC4 LINE L1 -266 7776 7630 542 138 9 46 chr10 126500767 126500876 -19088412 - L1PA10 LINE L1 -11 6157 6053 2150 226 121 46 chr10 126500876 126501397 -19087891 - L1MC4 LINE L1 -412 7630 7150 213 39 0 0 chr10 126501397 126501423 -19087865 + (TATG)n Simple_repeat Simple_repeat 3 28 0 2150 226 121 46 chr10 126501423 126501649 -19087639 - L1MC4 LINE L1 -892 7150 6648 428 274 9 9 chr10 126501676 126501789 -19087499 - MER58 DNA MER1_type -101 114 2 37416 38 21 3 chr10 126502428 126508617 -19080671 - L1PA2 LINE L1 0 6155 1 234 288 50 14 chr10 126508838 126508977 -19080311 + L1M4 LINE L1 2147 2290 -3856 506 346 15 30 chr10 126509034 126509297 -19079991 + LTR33 LTR ERVL 24 282 -239 790 321 23 5 chr10 126509305 126509696 -19079592 - L1M3de LINE L1 -5519 372 3 248 310 0 23 chr10 126511919 126512006 -19077282 + (CATA)n Simple_repeat Simple_repeat 4 88 0 226 256 0 0 chr10 126512437 126512480 -19076808 - LTR40b LTR ERVL -419 43 1 3334 139 38 19 chr10 126512537 126513164 -19076124 + L1PA16 LINE L1 5523 6161 -5 1393 213 15 42 chr10 126513186 126513558 -19075730 - L1MB8 LINE L1 -12 6166 5812 384 103 0 0 chr10 126513746 126513804 -19075484 + (TCTA)n Simple_repeat Simple_repeat 1 58 0 1597 205 30 7 chr10 126513805 126514103 -19075185 - MSTD LTR MaLR -3 393 89 1702 179 7 3 chr10 126514103 126514411 -19074877 + L1 LINE L1 4661 4969 -1177 23 33 0 0 chr10 126515091 126515121 -19074167 + AT_rich Low_complexity Low_complexity 1 30 0 1720 176 7 0 chr10 126515344 126515643 -19073645 - AluSx SINE Alu 0 301 1 546 259 28 76 chr10 126515791 126516042 -19073246 - L1ME3A LINE L1 -5 6165 5927 248 169 0 17 chr10 126516043 126516102 -19073186 + CT-rich Low_complexity Low_complexity 3 60 0 2126 122 0 0 chr10 126516941 126517235 -19072053 - AluSq SINE Alu -19 294 1 1316 148 152 4 chr10 126518400 126518663 -19070625 - AluSq SINE Alu -11 302 1 527 310 75 27 chr10 126519114 126519591 -19069697 + L1MC3 LINE L1 4801 5300 -846 1945 144 3 7 chr10 126519593 126519885 -19069403 + AluSx SINE Alu 1 291 -21 219 36 0 0 chr10 126519885 126519913 -19069375 + (TA)n Simple_repeat Simple_repeat 2 29 0 297 394 44 6 chr10 126519919 126520099 -19069189 + L3 LINE CR1 1388 1574 -3 358 378 47 9 chr10 126520662 126520895 -19068393 + MIR SINE MIR 8 249 -13 697 167 193 0 chr10 126521388 126521538 -19067750 - MER20 DNA MER1_type 0 219 41 22 56 0 0 chr10 126522412 126522448 -19066840 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr10 126523003 126523024 -19066264 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 126523286 126523307 -19065981 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr10 126523944 126523972 -19065316 + AT_rich Low_complexity Low_complexity 1 28 0 1394 149 141 0 chr10 126524423 126524755 -19064533 + MER44D DNA MER2_type 1 609 0 228 364 45 78 chr10 126527099 126527253 -19062035 - L2 LINE L2 -1 3271 3123 441 171 37 0 chr10 126527658 126527740 -19061548 - MER53 DNA DNA -104 85 1 386 289 25 50 chr10 126527751 126527910 -19061378 - MLT1K LTR MaLR -432 156 2 331 332 119 18 chr10 126527919 126528145 -19061143 + L1MC3 LINE L1 5584 5832 -1976 431 248 44 18 chr10 126528163 126528276 -19061012 - L2 LINE L2 -1 3312 3197 951 228 26 16 chr10 126528763 126529070 -19060218 - HsTC2 DNA Tc2 -25 1873 1564 706 242 20 0 chr10 126529078 126529231 -19060057 - HsTC2 DNA Tc2 -1742 156 1 254 330 38 0 chr10 126529231 126529337 -19059951 + MIR SINE MIR 153 262 0 414 255 27 80 chr10 126529432 126529484 -19059804 + MER5B DNA MER1_type 1 54 -124 237 108 0 0 chr10 126529484 126529521 -19059767 + (TG)n Simple_repeat Simple_repeat 2 38 0 414 255 27 80 chr10 126529521 126529656 -19059632 + MER5B DNA MER1_type 54 178 0 284 254 9 79 chr10 126529656 126529770 -19059518 - L2 LINE L2 -533 2781 2676 1487 275 118 4 chr10 126529797 126530288 -19059000 - L2 LINE L2 -952 2362 1816 1081 313 13 6 chr10 126530290 126530384 -19058904 + L1M4b LINE L1 11 103 -6756 2348 94 0 0 chr10 126530384 126530691 -19058597 + AluSc SINE Alu 3 309 0 1081 313 13 6 chr10 126530691 126530750 -19058538 + L1M4b LINE L1 103 160 -6699 4115 109 16 8 chr10 126530750 126531385 -19057903 - MER51C LTR ERV1 0 640 1 1081 313 13 6 chr10 126531385 126531819 -19057469 + L1M4b LINE L1 160 669 -6190 287 258 0 0 chr10 126531913 126531975 -19057313 + L1MC3 LINE L1 6674 6735 -1050 585 245 14 62 chr10 126531978 126532027 -19057261 - L1MC3 LINE L1 -868 6917 6867 282 29 0 0 chr10 126532027 126532062 -19057226 + (TG)n Simple_repeat Simple_repeat 1 35 0 585 245 14 62 chr10 126532062 126532224 -19057064 - L1MC3 LINE L1 -918 6867 6736 347 183 0 0 chr10 126532198 126532258 -19057030 + L1MC4 LINE L1 6759 6818 -1224 * 2072 212 38 6 chr10 126532262 126532795 -19056493 + L1MB5 LINE L1 3885 4434 -1712 1101 103 4 3 chr10 126532817 126533096 -19056192 - THE1B LTR MaLR 0 364 1 3480 226 70 32 chr10 126533098 126533981 -19055307 + L1MB5 LINE L1 4454 5301 -873 1222 200 131 7 chr10 126533981 126534286 -19055002 - MER2 DNA MER2_type 0 344 2 459 48 0 0 chr10 126534287 126534349 -19054939 + (TG)n Simple_repeat Simple_repeat 1 62 0 3480 226 70 32 chr10 126534349 126535081 -19054207 + L1MB5 LINE L1 5300 6141 -33 1908 126 47 60 chr10 126535117 126535497 -19053791 + THE1C LTR MaLR 1 375 0 652 156 92 0 chr10 126535497 126535638 -19053650 + L1M4 LINE L1 4618 4771 -1375 900 110 7 15 chr10 126535659 126535795 -19053493 - MSTB1 LTR MaLR -2 430 296 27 0 0 0 chr10 126536690 126536717 -19052571 + AT_rich Low_complexity Low_complexity 1 27 0 22 0 0 0 chr10 126538394 126538416 -19050872 + AT_rich Low_complexity Low_complexity 1 22 0 671 229 0 0 chr10 126538719 126538850 -19050438 - FLAM_C SINE Alu 0 133 3 29 47 0 0 chr10 126540917 126540960 -19048328 + AT_rich Low_complexity Low_complexity 1 43 0 40 79 0 0 chr10 126541320 126541409 -19047879 + AT_rich Low_complexity Low_complexity 1 89 0 470 219 54 28 chr10 126541585 126541756 -19047532 - MER104 DNA Tc2 0 180 1 983 288 137 10 chr10 126541756 126542373 -19046915 - L1MC4a LINE L1 -804 5342 5211 21 57 0 0 chr10 126542376 126542411 -19046877 + AT_rich Low_complexity Low_complexity 1 35 0 1874 197 0 16 chr10 126542414 126542624 -19046664 - MLT1A1 LTR MaLR 0 365 162 1792 126 0 8 chr10 126542624 126542879 -19046409 - AluSg SINE Alu -57 253 1 1874 197 0 16 chr10 126542879 126543039 -19046249 - MLT1A1 LTR MaLR -203 162 1 283 323 45 68 chr10 126543274 126543494 -19045794 + MLT1G1 LTR MaLR 138 352 -243 345 315 83 33 chr10 126543575 126543924 -19045364 - MLT1G1 LTR MaLR -96 453 81 31 58 0 0 chr10 126544407 126544459 -19044829 + AT_rich Low_complexity Low_complexity 1 52 0 545 256 136 16 chr10 126544578 126544836 -19044452 + L1MB7 LINE L1 5887 6175 -9 746 310 35 63 chr10 126544850 126545371 -19043917 - L2 LINE L2 -623 2691 2206 3882 186 44 40 chr10 126545419 126546242 -19043046 - LTR1B LTR ERV1 0 826 1 359 178 5 63 chr10 126546793 126546984 -19042304 + (TA)n Simple_repeat Simple_repeat 1 180 0 29 0 0 0 chr10 126547730 126547759 -19041529 + AT_rich Low_complexity Low_complexity 1 29 0 24 32 0 0 chr10 126548244 126548275 -19041013 + AT_rich Low_complexity Low_complexity 1 31 0 405 184 0 0 chr10 126548276 126548352 -19040936 - L1MA9 LINE L1 -38 6098 6023 11797 230 64 15 chr10 126548353 126550228 -19039060 - L1MA9 LINE L1 -141 5995 4214 387 0 0 0 chr10 126550228 126550271 -19039017 + (TG)n Simple_repeat Simple_repeat 2 44 0 11797 230 64 15 chr10 126550271 126554130 -19035158 - L1MA9 LINE L1 -1922 4214 383 42117 37 21 3 chr10 126554364 126560403 -19028885 - L1PA3 LINE L1 -3 6152 1 232 288 50 14 chr10 126560625 126560764 -19028524 + L1M4 LINE L1 2147 2290 -3856 504 342 15 30 chr10 126560821 126561084 -19028204 + LTR33 LTR ERVL 24 282 -239 802 317 23 5 chr10 126561092 126561483 -19027805 - L1MA9 LINE L1 -5519 372 3 248 310 0 23 chr10 126563706 126563793 -19025495 + (CATA)n Simple_repeat Simple_repeat 4 88 0 231 329 56 37 chr10 126563850 126564011 -19025277 - LTR40a LTR ERVL -159 360 197 226 256 0 0 chr10 126564224 126564267 -19025021 - LTR40b LTR ERVL -419 43 1 3336 139 38 19 chr10 126564324 126564951 -19024337 + L1PA16 LINE L1 5523 6161 -5 1385 210 19 44 chr10 126564973 126565345 -19023943 - L1MB8 LINE L1 -12 6166 5812 333 100 0 0 chr10 126565533 126565583 -19023705 + (TCTA)n Simple_repeat Simple_repeat 1 50 0 1586 208 30 7 chr10 126565584 126565882 -19023406 - MSTD LTR MaLR -3 393 89 1672 185 7 3 chr10 126565882 126566190 -19023098 + L1 LINE L1 4661 4969 -1177 23 33 0 0 chr10 126566870 126566900 -19022388 + AT_rich Low_complexity Low_complexity 1 30 0 1747 172 7 0 chr10 126567123 126567422 -19021866 - AluSx SINE Alu 0 301 1 546 259 28 76 chr10 126567570 126567821 -19021467 - L1ME3A LINE L1 -5 6165 5927 299 164 0 15 chr10 126567822 126567889 -19021399 + CT-rich Low_complexity Low_complexity 3 68 0 2096 126 0 0 chr10 126568729 126569023 -19020265 - AluSq SINE Alu -19 294 1 1675 98 147 4 chr10 126570186 126570452 -19018836 - AluSq SINE Alu -9 304 1 283 281 237 0 chr10 126570566 126570701 -19018587 + Charlie8 DNA MER1_type 45 211 -2206 4141 211 134 25 chr10 126570909 126570968 -19018320 - Charlie1a DNA MER1_type -1403 1358 1307 1802 106 0 4 chr10 126570968 126571244 -19018044 - AluSc SINE Alu 0 310 36 4141 211 134 25 chr10 126571244 126572404 -19016884 - Charlie1a DNA MER1_type -1454 1307 4 1014 258 70 50 chr10 126572441 126573635 -19015653 - L1ME1 LINE L1 -6 6229 4943 1913 241 67 38 chr10 126573651 126574682 -19014606 - L1ME1 LINE L1 -3157 3058 2026 1976 146 3 0 chr10 126574689 126574998 -19014290 + AluSq SINE Alu 1 310 -3 2002 264 137 19 chr10 126575008 126575199 -19014089 - MER21B LTR ERV1 -51 812 645 2227 73 31 0 chr10 126575199 126575485 -19013803 + AluY SINE Alu 1 295 -16 2002 264 137 19 chr10 126575485 126575986 -19013302 - MER21B LTR ERV1 -218 645 38 274 294 29 0 chr10 126575994 126576062 -19013226 - MER21B LTR ERV1 -775 88 19 693 295 108 16 chr10 126576229 126576663 -19012625 - L1ME1 LINE L1 -4454 1942 1469 808 284 111 64 chr10 126576663 126577503 -19011785 - L1ME1 LINE L1 -5495 901 23 21 57 0 0 chr10 126577628 126577663 -19011625 + AT_rich Low_complexity Low_complexity 1 35 0 235 268 0 18 chr10 126578109 126578165 -19011123 + Tigger5 DNA MER2_type 1 55 -2268 * 439 200 20 40 chr10 126578160 126578260 -19011028 + Tigger5 DNA MER2_type 2225 2322 -1 216 0 0 0 chr10 126578434 126578458 -19010830 + (TAA)n Simple_repeat Simple_repeat 2 25 0 263 269 105 34 chr10 126580109 126580296 -19008992 - MIR SINE MIR -28 180 6 33 73 0 0 chr10 126581614 126581682 -19007606 + AT_rich Low_complexity Low_complexity 1 68 0 493 273 80 7 chr10 126582719 126582869 -19006419 - MIR SINE MIR -94 168 8 422 283 38 19 chr10 126583215 126583374 -19005914 + MIR SINE MIR 96 257 -5 21 71 0 0 chr10 126584194 126584236 -19005052 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr10 126584474 126584495 -19004793 + AT_rich Low_complexity Low_complexity 1 21 0 2241 103 0 3 chr10 126584586 126584887 -19004401 + AluSq SINE Alu 1 300 -13 333 285 86 57 chr10 126584996 126585347 -19003941 - MER65A LTR ERV1 0 445 85 * 451 197 17 140 chr10 126585328 126585506 -19003782 - MER65A LTR ERV1 -289 156 1 630 275 57 63 chr10 126585506 126585855 -19003433 - MER65A-int LTR ERV1 -1 4870 4524 6223 244 28 31 chr10 126585855 126588129 -19001159 - L1 LINE L1 -2202 4646 2459 1870 160 144 0 chr10 126588146 126588520 -19000768 + MSTA LTR MaLR 1 428 0 8242 188 24 15 chr10 126588520 126589971 -18999317 + MSTA-int LTR MaLR 1 1470 -181 2143 132 0 0 chr10 126589971 126590275 -18999013 - AluSc SINE Alu -5 304 1 8242 188 24 15 chr10 126590275 126590458 -18998830 + MSTA-int LTR MaLR 1470 1650 -1 1856 179 141 0 chr10 126590466 126590835 -18998453 + MSTA LTR MaLR 8 428 0 3649 274 29 28 chr10 126590835 126592210 -18997078 - L1 LINE L1 -4492 2357 982 2808 191 47 47 chr10 126592293 126593477 -18995811 - MER65-int LTR ERV1 -2377 2494 1715 2010 197 117 143 chr10 126592294 126592623 -18996665 - LTR57-int LTR ERVL -3771 1572 1236 * 1588 185 94 47 chr10 126592623 126593028 -18996260 - MSTB LTR MaLR -2 424 1 2010 197 117 143 chr10 126593028 126593872 -18995416 - LTR57-int LTR ERVL -4107 1236 371 207 0 0 0 chr10 126593872 126593895 -18995393 + (TA)n Simple_repeat Simple_repeat 2 24 0 * 342 0 0 0 chr10 126593894 126593932 -18995356 + (GA)n Simple_repeat Simple_repeat 2 39 0 2010 197 117 143 chr10 126593895 126593940 -18995348 - LTR57-int LTR ERVL -4972 371 424 1666 172 14 0 chr10 126593940 126594219 -18995069 - AluJb SINE Alu -29 283 1 2010 197 117 143 chr10 126594219 126594339 -18994949 - LTR57-int LTR ERVL -4918 425 303 447 288 45 96 chr10 126594724 126595193 -18994095 - MER65A LTR ERV1 0 445 1 363 256 67 61 chr10 126595193 126595262 -18994026 + L1M4 LINE L1 2295 2362 -3784 2300 62 0 3 chr10 126595262 126595554 -18993734 + AluY SINE Alu 1 291 -20 363 256 67 61 chr10 126595554 126595664 -18993624 + L1M4 LINE L1 2362 2475 -3671 492 296 68 23 chr10 126596011 126596407 -18992881 + L1M4 LINE L1 2895 3308 -2838 711 174 43 141 chr10 126596497 126596802 -18992486 - ORSL DNA AcHobo 0 275 1 28 86 0 0 chr10 126596817 126596887 -18992401 + AT_rich Low_complexity Low_complexity 1 70 0 799 243 29 33 chr10 126597151 126597361 -18991927 - MER63A DNA MER1_type -1 209 1 22 70 0 0 chr10 126599348 126599391 -18989897 + AT_rich Low_complexity Low_complexity 1 43 0 3701 196 54 31 chr10 126599646 126599987 -18989301 - L1MB5 LINE L1 0 6174 5842 1849 158 3 3 chr10 126599987 126600278 -18989010 - AluSx SINE Alu -17 295 5 3701 196 54 31 chr10 126600278 126600526 -18988762 - L1MB5 LINE L1 -332 5842 5601 1986 94 0 8 chr10 126600526 126600792 -18988496 + AluSg SINE Alu 45 308 -2 3701 196 54 31 chr10 126600792 126601411 -18987877 - L1MB5 LINE L1 -573 5601 4927 524 67 27 0 chr10 126601411 126601486 -18987802 + MADE1 DNA Mariner 4 80 0 3701 196 54 31 chr10 126601486 126601659 -18987629 - L1MB5 LINE L1 -1247 4927 4759 190 348 43 33 chr10 126601797 126601889 -18987399 - L2 LINE L2 -36 3236 3144 341 245 42 56 chr10 126602010 126602153 -18987135 + MLT1L LTR MaLR 142 282 -333 224 347 0 13 chr10 126602439 126602514 -18986774 - L2 LINE L2 -191 3081 3008 808 256 41 0 chr10 126602564 126602783 -18986505 - L1 LINE L1 -906 5240 5013 * 2513 189 39 4 chr10 126602777 126603290 -18985998 + L1MA9 LINE L1 5278 5808 -504 203 161 63 7 chr10 126603299 126603442 -18985846 + (TA)n Simple_repeat Simple_repeat 1 151 0 423 0 0 0 chr10 126603445 126603492 -18985796 + (CA)n Simple_repeat Simple_repeat 2 48 0 2168 160 60 25 chr10 126603493 126603963 -18985325 + L1MA9 LINE L1 5795 6280 -32 417 301 81 23 chr10 126604590 126604763 -18984525 - MLT1J LTR MaLR -318 193 11 201 354 39 23 chr10 126604808 126604938 -18984350 - L2 LINE L2 -663 2651 2520 1966 109 0 60 chr10 126605482 126605828 -18983460 - AluSx SINE Alu 0 328 1 25 31 0 0 chr10 126607296 126607328 -18981960 + AT_rich Low_complexity Low_complexity 1 32 0 2368 251 65 44 chr10 126607632 126608772 -18980516 + L1ME3A LINE L1 4992 6161 -9 1115 245 11 7 chr10 126608795 126609194 -18980094 + L1ME1 LINE L1 586 1056 -5487 1323 221 24 3 chr10 126609210 126609508 -18979780 + L1MB7 LINE L1 5526 5829 -349 269 198 70 81 chr10 126609508 126609594 -18979694 + Tigger3(Golem) DNA MER2_type 1 85 -2944 * 5257 148 71 54 chr10 126609566 126610214 -18979074 + Tigger3(Golem) DNA MER2_type 1880 2558 -471 2113 110 0 0 chr10 126610214 126610540 -18978748 - AluSg SINE Alu 0 326 1 5257 148 71 54 chr10 126610540 126611020 -18978268 + Tigger3(Golem) DNA MER2_type 2558 3028 -1 1162 188 83 0 chr10 126611042 126611318 -18977970 + L1MB7 LINE L1 5852 6150 -34 2020 248 61 21 chr10 126611337 126612047 -18977241 + L1ME1 LINE L1 1300 2037 -4503 687 256 57 4 chr10 126612152 126612398 -18976890 + L1ME1 LINE L1 2216 2474 -4066 6157 61 12 0 chr10 126612426 126613664 -18975624 - L1PA8 LINE L1 -5 6167 4879 39 0 0 0 chr10 126614442 126614481 -18974807 + AT_rich Low_complexity Low_complexity 1 39 0 3243 226 74 36 chr10 126614759 126615058 -18974230 + L1ME1 LINE L1 4677 4963 -1597 2308 92 0 3 chr10 126615058 126615362 -18973926 - AluSq SINE Alu -10 303 1 3243 226 74 36 chr10 126615362 126615501 -18973787 + L1ME1 LINE L1 4963 5095 -1465 902 197 58 5 chr10 126615501 126615709 -18973579 + MER20 DNA MER1_type 1 219 0 3243 226 74 36 chr10 126615709 126616851 -18972437 + L1ME1 LINE L1 5095 6309 -251 448 247 127 30 chr10 126616944 126617110 -18972178 - MIR SINE MIR -1 261 80 199 242 0 23 chr10 126617165 126617216 -18972072 + MIR SINE MIR 30 79 -129 206 275 187 0 chr10 126617255 126617346 -18971942 + MIR SINE MIR 155 262 0 411 128 28 0 chr10 126618034 126618143 -18971145 + (TA)n Simple_repeat Simple_repeat 2 113 0 300 27 0 0 chr10 126618654 126618691 -18970597 + (CA)n Simple_repeat Simple_repeat 2 38 0 228 282 74 61 chr10 126619073 126619236 -18970052 - MLT1J LTR MaLR -252 259 95 274 266 42 49 chr10 126619262 126619405 -18969883 - L1ME4a LINE L1 -110 6011 5870 7202 43 9 0 chr10 126619416 126620736 -18968552 - L1PA5 LINE L1 -5 6149 4831 4042 61 8 0 chr10 126620736 126621262 -18968026 + L1PA5 LINE L1 4301 4830 -1316 474 290 35 41 chr10 126621545 126621714 -18967574 + MIR3 SINE MIR 31 198 -10 25 0 0 0 chr10 126622996 126623021 -18966267 + AT_rich Low_complexity Low_complexity 1 25 0 1007 121 55 12 chr10 126623831 126623996 -18965292 + L1PA16 LINE L1 5986 6157 -9 688 250 5 21 chr10 126624048 126624240 -18965048 - L1M4c LINE L1 -4865 1519 1331 24 32 0 0 chr10 126624744 126624775 -18964513 + AT_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr10 126625603 126625631 -18963657 + AT_rich Low_complexity Low_complexity 1 28 0 323 306 43 92 chr10 126626182 126626463 -18962825 + L2 LINE L2 2994 3260 -12 2313 77 3 0 chr10 126626828 126627125 -18962163 - AluSx SINE Alu -3 309 12 839 245 8 65 chr10 126627362 126627623 -18961665 + MLT1H1 LTR MaLR 1 246 -309 230 289 0 0 chr10 126627624 126627676 -18961612 + polypurine Low_complexity Low_complexity 3 54 0 230 234 351 0 chr10 126627713 126627824 -18961464 + MLT1H1 LTR MaLR 310 459 -83 22 70 0 0 chr10 126628301 126628344 -18960944 + AT_rich Low_complexity Low_complexity 1 43 0 1980 255 63 28 chr10 126628791 126628865 -18960423 - MER20B DNA MER1_type -37 746 676 4161 166 43 39 chr10 126628865 126629238 -18960050 + MER6 DNA MER2_type 5 375 -490 204 40 0 0 chr10 126629238 126629263 -18960025 + (TGAA)n Simple_repeat Simple_repeat 4 28 0 4161 166 43 39 chr10 126629263 126629743 -18959545 + MER6 DNA MER2_type 375 862 -3 1980 255 63 28 chr10 126629743 126630323 -18958965 - MER20B DNA MER1_type -107 676 69 1654 73 0 0 chr10 126630701 126630907 -18958381 - AluY SINE Alu 0 311 106 21 0 0 0 chr10 126631027 126631048 -18958240 + AT_rich Low_complexity Low_complexity 1 21 0 485 281 38 22 chr10 126631257 126631389 -18957899 + LTR33 LTR ERVL 151 279 -242 2196 137 24 16 chr10 126631389 126631761 -18957527 - THE1C LTR MaLR 0 375 1 485 281 38 22 chr10 126631761 126631962 -18957326 + LTR33 LTR ERVL 279 521 0 244 231 0 0 chr10 126632044 126632096 -18957192 - L2 LINE L2 -8 3305 3254 231 245 38 19 chr10 126632149 126632255 -18957033 + (TAATG)n Simple_repeat Simple_repeat 1 108 0 458 337 113 46 chr10 126632338 126633161 -18956127 - L2 LINE L2 -231 3041 2169 288 273 148 16 chr10 126633272 126633400 -18955888 - L2 LINE L2 -1420 1894 1750 208 302 0 0 chr10 126633445 126633508 -18955780 + (TATG)n Simple_repeat Simple_repeat 4 66 0 227 333 121 10 chr10 126633646 126633745 -18955543 + L2 LINE L2 3173 3282 -31 3900 35 0 14 chr10 126634393 126634878 -18954410 - L1PA4 LINE L1 -5 6150 5673 1862 19 0 0 chr10 126634878 126635091 -18954197 + L1PA4 LINE L1 5442 5654 -501 25 65 0 0 chr10 126635652 126635698 -18953590 + AT_rich Low_complexity Low_complexity 1 46 0 586 285 66 31 chr10 126635720 126635948 -18953340 - MIR SINE MIR -26 236 1 432 330 43 16 chr10 126637861 126638046 -18951242 - MIR3 SINE MIR -2 206 17 240 250 0 0 chr10 126638108 126638160 -18951128 + GA-rich Low_complexity Low_complexity 3 54 0 680 283 55 44 chr10 126639125 126639225 -18950063 + MARNA DNA Mariner 170 267 -319 651 207 101 50 chr10 126639225 126639423 -18949865 - MER3 DNA MER1_type 0 209 2 680 283 55 44 chr10 126639423 126639594 -18949694 + MARNA DNA Mariner 267 444 -142 472 258 38 15 chr10 126639677 126639809 -18949479 + LTR33 LTR ERVL 1 135 -386 532 286 105 90 chr10 126639890 126640270 -18949018 - MLT1H LTR MaLR 0 549 159 1857 142 0 32 chr10 126640270 126640580 -18948708 - AluJo SINE Alu -10 302 3 532 286 105 90 chr10 126640580 126640667 -18948621 - MLT1H LTR MaLR -390 159 75 270 350 66 16 chr10 126640705 126640888 -18948400 + LTR33 LTR ERVL 244 435 -86 852 203 62 62 chr10 126642660 126642916 -18946372 + MIR SINE MIR 7 262 0 180 244 158 37 chr10 126643394 126643476 -18945812 + MIR SINE MIR 43 134 -74 521 284 93 21 chr10 126644778 126644972 -18944316 - MIR SINE MIR -35 227 20 696 128 0 0 chr10 126645882 126645984 -18943304 - L1PA16 LINE L1 -324 5842 5741 691 256 73 66 chr10 126646276 126646679 -18942609 + MLT1G LTR MaLR 1 388 -207 355 282 159 25 chr10 126646914 126647077 -18942211 + MLT1J2 LTR MaLR 266 450 0 299 333 123 0 chr10 126647112 126647226 -18942062 - L2 LINE L2 -2 3270 3143 214 372 112 28 chr10 126647373 126647658 -18941630 + L2 LINE L2 2872 3180 -92 1295 189 66 33 chr10 126647717 126648060 -18941228 + AluJo SINE Alu 1 353 0 680 231 125 23 chr10 126648351 126648567 -18940721 - MIR SINE MIR -2 260 23 186 103 0 0 chr10 126649188 126649217 -18940071 + (TATATG)n Simple_repeat Simple_repeat 4 32 0 267 353 0 0 chr10 126649668 126649736 -18939552 + L2 LINE L2 3205 3272 0 2172 196 19 58 chr10 126649828 126650010 -18939278 - LTR55 LTR ERV -5 543 355 2874 60 0 0 chr10 126650010 126650363 -18938925 + THE1A LTR MaLR 1 353 -2 2172 196 19 58 chr10 126650363 126650745 -18938543 - LTR55 LTR ERV -193 355 1 234 228 15 31 chr10 126652674 126652770 -18936518 - MLT1I-int LTR MaLR -1309 62 1 900 316 36 15 chr10 126652770 126653105 -18936183 - MLT1I LTR MaLR 0 409 68 752 260 39 10 chr10 126653967 126654171 -18935117 - MIR SINE MIR -50 212 3 465 287 36 51 chr10 126654777 126654875 -18934413 + MIR SINE MIR 58 153 -109 1892 148 7 13 chr10 126654875 126655185 -18934103 + AluSx SINE Alu 1 308 -4 465 287 36 51 chr10 126655185 126655281 -18934007 + MIR SINE MIR 153 249 -13 288 0 0 0 chr10 126655288 126655320 -18933968 + (ATG)n Simple_repeat Simple_repeat 2 33 0 655 284 22 44 chr10 126655483 126655708 -18933580 + MIR SINE MIR 2 221 -41 30 93 0 0 chr10 126655718 126655804 -18933484 + AT_rich Low_complexity Low_complexity 1 86 0 180 0 0 0 chr10 126656167 126656187 -18933101 + (T)n Simple_repeat Simple_repeat 1 20 0 21 57 0 0 chr10 126656833 126656868 -18932420 + AT_rich Low_complexity Low_complexity 1 35 0 322 363 62 26 chr10 126657201 126657394 -18931894 + MIR SINE MIR 1 200 -62 787 272 26 0 chr10 126657916 126658107 -18931181 + MIR SINE MIR 53 248 -14 38 51 0 0 chr10 126658688 126658747 -18930541 + AT_rich Low_complexity Low_complexity 1 59 0 301 301 49 49 chr10 126659140 126659263 -18930025 + L2 LINE L2 3191 3313 0 610 239 7 0 chr10 126659481 126659636 -18929652 - L1MA10 LINE L1 0 6334 6179 262 114 15 0 chr10 126659659 126659708 -18929580 - L1M3 LINE L1 -721 5450 5395 2358 189 29 48 chr10 126659739 126660296 -18928992 - L1MB1 LINE L1 -50 6139 5594 * 5356 169 26 18 chr10 126660292 126661887 -18927401 - L1MA4A LINE L1 0 7365 5756 623 163 0 159 chr10 126661877 126662116 -18927172 - L1MA4A LINE L1 -3024 4184 3984 * 1780 279 91 90 chr10 126662138 126662841 -18926447 - L1MA4A LINE L1 -5922 1287 595 2080 151 0 37 chr10 126662841 126663191 -18926097 - MER1B DNA MER1_type 0 337 1 1780 279 91 90 chr10 126663191 126663787 -18925501 - L1MA4A LINE L1 -6614 595 1 1591 147 16 105 chr10 126663792 126664064 -18925224 - L1M2 LINE L1 -701 5611 5316 1825 160 0 0 chr10 126664064 126664345 -18924943 + AluJb SINE Alu 1 281 -31 252 0 0 0 chr10 126664348 126664376 -18924912 + (CAAT)n Simple_repeat Simple_repeat 2 29 0 1591 147 16 105 chr10 126664376 126664669 -18924619 - L1M2 LINE L1 -998 5314 5072 57 28 0 0 chr10 126665224 126665295 -18923993 + AT_rich Low_complexity Low_complexity 1 71 0 21 36 0 0 chr10 126665317 126665345 -18923943 + AT_rich Low_complexity Low_complexity 1 28 0 1459 203 23 13 chr10 126666147 126666452 -18922836 - Tigger3(Golem) DNA MER2_type 0 3029 2722 296 269 0 13 chr10 126666451 126666529 -18922759 - Tigger3(Golem) DNA MER2_type -2948 81 5 * 342 45 0 0 chr10 126666788 126666832 -18922456 + (CA)n Simple_repeat Simple_repeat 2 45 0 387 60 0 0 chr10 126667540 126667590 -18921698 + (CA)n Simple_repeat Simple_repeat 1 50 0 1396 106 8 51 chr10 126668415 126668527 -18920761 - L1PA12 LINE L1 -280 5888 5790 2171 71 50 3 chr10 126668527 126668809 -18920479 - AluY SINE Alu -12 299 5 1396 106 8 51 chr10 126668809 126668933 -18920355 - L1PA12 LINE L1 -378 5790 5662 1067 174 0 0 chr10 126668933 126669105 -18920183 + AluSg/x SINE Alu 130 301 -9 2489 95 38 23 chr10 126669105 126669316 -18919972 - L1PA12 LINE L1 -493 5675 5454 1658 131 44 87 chr10 126669316 126669706 -18919582 - THE1C LTR MaLR 0 375 3 2489 95 38 23 chr10 126669706 126669885 -18919403 - L1PA12 LINE L1 -714 5454 5279 1802 164 35 0 chr10 126669954 126670240 -18919048 - AluJb SINE Alu -16 296 1 2270 100 0 0 chr10 126671112 126671412 -18917876 + AluSc SINE Alu 1 300 -9 702 258 52 111 chr10 126671516 126672113 -18917175 + L1 LINE L1 4279 4840 -1306 239 79 26 0 chr10 126672259 126672297 -18916991 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 5571 139 9 10 chr10 126672308 126673288 -18916000 - L1PA16 LINE L1 -9 6157 5179 * 10896 232 31 13 chr10 126673287 126676066 -18913222 + L1PA16 LINE L1 2354 5182 -964 28 61 0 0 chr10 126676294 126676343 -18912945 + AT_rich Low_complexity Low_complexity 1 49 0 286 294 67 8 chr10 126676466 126676662 -18912626 + L1 LINE L1 4803 5007 -1139 1822 192 67 13 chr10 126676724 126677114 -18912174 - MLT1C LTR MaLR -52 415 5 291 205 0 62 chr10 126677450 126677562 -18911726 + CT-rich Low_complexity Low_complexity 1 105 0 1709 218 65 39 chr10 126678631 126679121 -18910167 - MLT1D LTR MaLR -2 503 1 21 0 0 0 chr10 126679734 126679755 -18909533 + AT_rich Low_complexity Low_complexity 1 21 0 778 269 95 21 chr10 126680215 126680553 -18908735 - L1ME4a LINE L1 -209 5912 5550 32 26 0 0 chr10 126680664 126680703 -18908585 + AT_rich Low_complexity Low_complexity 1 39 0 23 33 0 0 chr10 126681083 126681113 -18908175 + AT_rich Low_complexity Low_complexity 1 30 0 283 309 48 69 chr10 126683478 126683666 -18905622 + L3 LINE CR1 345 528 -1049 2139 121 0 3 chr10 126685199 126685504 -18903784 + AluSx SINE Alu 1 304 -8 458 271 176 4 chr10 126685873 126686058 -18903230 - L2 LINE L2 -8 3305 3067 441 50 0 0 chr10 126686058 126686118 -18903170 + (TG)n Simple_repeat Simple_repeat 1 60 0 458 271 176 4 chr10 126686118 126686176 -18903112 - L2 LINE L2 -246 3067 3020 788 0 11 0 chr10 126686306 126686398 -18902890 + (TCTA)n Simple_repeat Simple_repeat 4 96 0 1413 214 48 12 chr10 126686859 126687190 -18902098 - MER61A LTR ERV1 0 343 1 185 330 20 95 chr10 126688237 126688437 -18900851 + L3 LINE CR1 700 884 -693 333 256 50 58 chr10 126688446 126688567 -18900721 + L3 LINE CR1 1443 1562 -15 242 331 25 41 chr10 126690071 126690192 -18899096 + L2 LINE L2 2849 2967 -347 2244 94 0 16 chr10 126690192 126690501 -18898787 - AluSc SINE Alu -5 304 1 194 238 217 21 chr10 126690858 126691001 -18898287 + L2 LINE L2 3008 3178 -135 1910 133 7 13 chr10 126692509 126692810 -18896478 - AluSx SINE Alu -13 299 1 209 296 41 0 chr10 126693959 126694047 -18895241 + (CATATA)n Simple_repeat Simple_repeat 4 98 -7 2603 85 8 0 chr10 126694047 126694399 -18894889 - THE1A LTR MaLR 0 355 1 209 296 41 0 chr10 126694399 126694408 -18894880 + (CATATA)n Simple_repeat Simple_repeat 98 105 0 2030 99 16 36 chr10 126696169 126696492 -18892796 - AluSq SINE Alu 0 313 1 502 296 61 20 chr10 126697090 126697286 -18892002 - MIR SINE MIR -6 256 53 388 243 63 18 chr10 126697313 126697424 -18891864 - MIR SINE MIR -100 162 47 21 0 0 0 chr10 126698489 126698510 -18890778 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr10 126699021 126699050 -18890238 + AT_rich Low_complexity Low_complexity 1 29 0 2223 67 0 67 chr10 126700633 126700962 -18888326 + AluY SINE Alu 1 307 -4 358 346 68 30 chr10 126701809 126702075 -18887213 - L1MEd LINE L1 -3679 2450 2175 315 0 0 0 chr10 126702142 126702177 -18887111 + (TG)n Simple_repeat Simple_repeat 2 36 0 2154 122 10 0 chr10 126702621 126702917 -18886371 + AluSx SINE Alu 7 305 -7 342 317 185 8 chr10 126702948 126703191 -18886097 - HAL1 LINE L1 -845 1662 1377 2942 70 24 55 chr10 126703373 126703831 -18885457 - MLT2A1 LTR ERVL 0 444 1 29 0 0 0 chr10 126704266 126704295 -18884993 + AT_rich Low_complexity Low_complexity 1 29 0 2148 213 18 59 chr10 126704303 126704847 -18884441 - L1MB8 LINE L1 -50 6128 5607 1003 224 17 4 chr10 126704849 126705081 -18884207 - L1MB8 LINE L1 -1231 4915 4681 312 253 11 129 chr10 126705162 126705340 -18883948 - MIR SINE MIR -55 207 51 337 276 96 32 chr10 126706437 126706593 -18882695 - L1ME4a LINE L1 -6 6115 5950 302 342 74 8 chr10 126706833 126707090 -18882198 - L1ME4a LINE L1 -493 5628 5355 21 0 0 0 chr10 126707487 126707508 -18881780 + AT_rich Low_complexity Low_complexity 1 21 0 236 225 150 0 chr10 126707897 126707977 -18881311 - L1MEd LINE L1 -5983 136 45 2147 176 142 28 chr10 126708044 126708537 -18880751 - MER44D DNA MER2_type -1 604 1 754 270 82 65 chr10 126708669 126709331 -18879957 - L1MEd LINE L1 -4866 1253 581 1273 131 0 0 chr10 126709391 126709582 -18879706 - AluSg/x SINE Alu 0 312 122 226 243 28 84 chr10 126709719 126709784 -18879504 - L1MEd LINE L1 -5973 146 88 1545 178 7 40 chr10 126709784 126710088 -18879200 + AluJb SINE Alu 6 299 -13 226 243 28 84 chr10 126710088 126710129 -18879159 - L1MEd LINE L1 -6031 88 46 2314 113 0 0 chr10 126710761 126711072 -18878216 - AluSx SINE Alu -1 311 1 22 56 0 0 chr10 126711075 126711111 -18878177 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr10 126711192 126711213 -18878075 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr10 126711585 126711609 -18877679 + AT_rich Low_complexity Low_complexity 1 24 0 508 245 19 0 chr10 126713023 126713129 -18876159 + FLAM_A SINE Alu 1 108 -34 216 0 0 0 chr10 126713129 126713153 -18876135 + (TCTA)n Simple_repeat Simple_repeat 4 27 0 2090 120 7 0 chr10 126713153 126713444 -18875844 - AluSx SINE Alu -19 293 1 243 0 0 0 chr10 126713460 126713487 -18875801 + (CA)n Simple_repeat Simple_repeat 2 28 0 213 304 104 9 chr10 126714160 126714275 -18875013 - L2 LINE L2 -565 2749 2624 326 356 90 31 chr10 126714511 126714865 -18874423 - L2 LINE L2 -1235 2079 1705 199 328 53 30 chr10 126715030 126715161 -18874127 - L2 LINE L2 -1878 1436 1303 561 304 75 70 chr10 126715168 126715463 -18873825 + L2 LINE L2 2435 2734 -580 2683 93 3 13 chr10 126715463 126715840 -18873448 - THE1C LTR MaLR -2 373 1 561 304 75 70 chr10 126715840 126715998 -18873290 + L2 LINE L2 2734 2890 -424 414 287 166 0 chr10 126717584 126717741 -18871547 - L1ME1 LINE L1 -72 6094 5912 642 80 0 0 chr10 126717742 126717830 -18871458 - AluSc SINE Alu -19 290 203 1638 244 56 19 chr10 126717830 126718297 -18870991 - L1ME1 LINE L1 -252 5914 5431 326 49 0 0 chr10 126718312 126718353 -18870935 - MADE1 DNA Mariner -39 41 1 412 213 9 37 chr10 126718722 126718830 -18870458 - L1MC5 LINE L1 -105 7856 7752 1705 223 8 14 chr10 126720309 126720676 -18868612 - MLT1A1 LTR MaLR 0 365 1 27 0 0 0 chr10 126721188 126721215 -18868073 + AT_rich Low_complexity Low_complexity 1 27 0 435 247 77 59 chr10 126722412 126722582 -18866706 + MIR SINE MIR 32 204 -58 195 333 0 68 chr10 126722651 126722768 -18866520 - L2 LINE L2 0 3272 3164 21 36 0 0 chr10 126722862 126722890 -18866398 + AT_rich Low_complexity Low_complexity 1 28 0 1650 268 113 29 chr10 126722972 126723568 -18865720 + L1MC4a LINE L1 4881 5022 -1124 2110 213 72 2 chr10 126723568 126724038 -18865250 + MLT1D LTR MaLR 1 503 -2 1650 268 113 29 chr10 126724038 126724448 -18864840 + L1MC4a LINE L1 5022 5396 -750 471 182 35 98 chr10 126724974 126725117 -18864171 - L2 LINE L2 -9 3304 3171 327 181 0 42 chr10 126725116 126725188 -18864100 - L2 LINE L2 -1366 1948 1880 * 335 331 103 0 chr10 126725575 126725720 -18863568 + MIR SINE MIR 33 192 -70 32101 98 16 6 chr10 126725794 126731464 -18857824 - L1PA7 LINE L1 -7 6462 629 189 365 12 0 chr10 126731623 126731708 -18857580 - MIR SINE MIR -67 195 110 813 198 17 17 chr10 126731927 126732099 -18857189 - MER20 DNA MER1_type -18 201 30 1983 113 3 58 chr10 126732291 126732602 -18856686 - AluSg SINE Alu -16 294 1 29 28 0 0 chr10 126733014 126733050 -18856238 + AT_rich Low_complexity Low_complexity 1 36 0 600 317 44 9 chr10 126734284 126734511 -18854777 + MIR SINE MIR 13 247 -15 242 272 104 48 chr10 126735804 126735929 -18853359 - L2 LINE L2 0 3313 3182 198 208 0 0 chr10 126736344 126736392 -18852896 + (TA)n Simple_repeat Simple_repeat 2 49 0 5761 158 42 39 chr10 126736739 126737269 -18852019 - L1MD3 LINE L1 0 7995 7468 2056 128 3 6 chr10 126737269 126737582 -18851706 - AluSx SINE Alu 0 312 1 5761 158 42 39 chr10 126737582 126738429 -18850859 - L1MD3 LINE L1 -527 7468 4971 455 197 27 39 chr10 126738432 126738576 -18850712 - L1ME4a LINE L1 -296 5825 5671 398 251 111 64 chr10 126738604 126738775 -18850513 + L2 LINE L2 3132 3310 -3 455 204 0 0 chr10 126738785 126738873 -18850415 - L1ME4a LINE L1 -2147 5661 5574 552 171 329 0 chr10 126738886 126739026 -18850262 - MER20 DNA MER1_type 0 219 34 326 254 127 45 chr10 126739042 126739176 -18850112 - L1ME4a LINE L1 -2248 5560 5416 578 244 23 45 chr10 126739437 126739613 -18849675 + MIR SINE MIR 15 186 -76 241 204 0 41 chr10 126740413 126740462 -18848826 + MER5B DNA MER1_type 2 48 -130 357 312 78 13 chr10 126740712 126740866 -18848422 + MIR SINE MIR 43 206 -56 200 215 0 46 chr10 126741314 126741379 -18847909 + T-rich Low_complexity Low_complexity 1 62 0 24 0 0 0 chr10 126741485 126741509 -18847779 + AT_rich Low_complexity Low_complexity 1 24 0 283 247 247 0 chr10 126742080 126742177 -18847111 + MIR SINE MIR 129 249 -13 622 290 57 40 chr10 126742206 126742456 -18846832 + MIR SINE MIR 11 262 0 702 247 30 6 chr10 126742552 126742718 -18846570 + MER69A DNA AcHobo 1 170 -7 229 208 81 57 chr10 126743733 126743824 -18845464 - MIR SINE MIR -63 145 50 2512 50 0 0 chr10 126743836 126744134 -18845154 - AluY SINE Alu -13 298 1 200 140 53 18 chr10 126745138 126745195 -18844093 + (TA)n Simple_repeat Simple_repeat 1 59 0 390 21 0 0 chr10 126745198 126745245 -18844043 + (TG)n Simple_repeat Simple_repeat 2 48 0 579 239 119 6 chr10 126746154 126746313 -18842975 - MER45A DNA AcHobo 0 178 2 1990 96 11 0 chr10 126746792 126747064 -18842224 + AluSq SINE Alu 35 309 -4 2287 93 7 10 chr10 126748284 126748594 -18840694 + AluSq SINE Alu 1 309 -4 716 265 54 22 chr10 126749018 126749330 -18839958 + MLT1H1 LTR MaLR 3 371 -224 557 100 0 0 chr10 126749483 126749563 -18839725 + AluS SINE Alu 1 80 -232 270 250 51 102 chr10 126749596 126749812 -18839476 + L1MC4 LINE L1 7828 8032 -10 208 338 31 68 chr10 126751222 126751444 -18837844 - L2 LINE L2 -468 2846 2633 782 245 31 0 chr10 126751574 126751733 -18837555 - MER97a DNA MER1_type? -730 164 1 271 341 80 33 chr10 126751737 126752036 -18837252 - L2 LINE L2 -835 2479 2167 5983 159 35 15 chr10 126752493 126753547 -18835741 + L1M1 LINE L1 1 1075 -6490 2793 243 69 17 chr10 126753597 126754441 -18834847 + L1ME3A LINE L1 5275 6162 -8 227 323 55 55 chr10 126755211 126755338 -18833950 + MIR3 SINE MIR 13 139 -69 234 0 0 0 chr10 126755835 126755861 -18833427 + (CA)n Simple_repeat Simple_repeat 1 26 0 325 328 93 16 chr10 126755973 126756156 -18833132 + MIR SINE MIR 20 216 -46 2163 83 0 0 chr10 126756337 126756614 -18832674 + AluSc SINE Alu 1 277 -32 183 42 0 0 chr10 126756615 126756639 -18832649 + (CAA)n Simple_repeat Simple_repeat 1 24 0 419 300 93 0 chr10 126756643 126756793 -18832495 + MIR SINE MIR 29 192 -70 183 254 127 16 chr10 126756847 126756910 -18832378 - L2 LINE L2 -36 3277 3208 1960 199 100 2 chr10 126757100 126757521 -18831767 - MLT1C LTR MaLR 0 467 6 6845 174 44 35 chr10 126757530 126758884 -18830404 - MLT1C-int LTR MaLR -5 1366 2 1744 201 76 11 chr10 126758885 126759319 -18829969 - MLT1C LTR MaLR 0 467 6 921 218 55 71 chr10 126760310 126760666 -18828622 + MLT1D LTR MaLR 20 390 0 272 279 215 68 chr10 126762795 126763046 -18826242 - L3 LINE CR1 -92 1485 1198 674 295 16 58 chr10 126763657 126763915 -18825373 + L2 LINE L2 2904 3150 -163 233 259 74 83 chr10 126763937 126764045 -18825243 - L1ME3A LINE L1 -15 6155 6049 21 36 0 0 chr10 126765773 126765801 -18823487 + AT_rich Low_complexity Low_complexity 1 28 0 206 171 0 0 chr10 126766267 126766308 -18822980 - L2 LINE L2 0 3313 3273 728 193 0 102 chr10 126766372 126766569 -18822719 + L1MB7 LINE L1 5995 6171 -13 2007 234 88 30 chr10 126766835 126767472 -18821816 - L1MC4 LINE L1 -131 7911 7238 2152 192 158 4 chr10 126767478 126768003 -18821285 - L1MC4 LINE L1 -960 7082 6477 2292 117 81 34 chr10 126768088 126768497 -18820791 - MSTA LTR MaLR 0 428 1 322 336 43 50 chr10 126769071 126769211 -18820077 + L2 LINE L2 3129 3267 -5 1341 220 31 50 chr10 126769809 126770127 -18819161 - MER45C DNA AcHobo -3 950 639 680 277 24 83 chr10 126770127 126770463 -18818825 - L2 LINE L2 -62 3251 2936 2454 57 0 0 chr10 126770521 126770819 -18818469 - AluY SINE Alu -13 298 1 2169 117 0 0 chr10 126771417 126771716 -18817572 - AluSg SINE Alu -1 309 11 208 388 0 0 chr10 126771745 126771825 -18817463 + L2 LINE L2 3185 3264 -8 328 322 29 84 chr10 126772436 126772540 -18816748 - MIR SINE MIR -34 228 120 2176 112 7 3 chr10 126772540 126772845 -18816443 + AluSp SINE Alu 1 306 -7 328 322 29 84 chr10 126772845 126772979 -18816309 - MIR SINE MIR -142 120 3 236 279 0 29 chr10 126772993 126773061 -18816227 + GA-rich Low_complexity Low_complexity 4 69 0 1128 217 122 21 chr10 126773221 126773548 -18815740 + MLT1A1 LTR MaLR 5 364 -1 253 132 94 0 chr10 126774217 126774270 -18815018 + MER110A LTR ERV1 5 62 -406 859 208 75 68 chr10 126774270 126774549 -18814739 + MER110A LTR ERV1 32 312 -156 351 0 0 0 chr10 126774623 126774662 -18814626 + (CA)n Simple_repeat Simple_repeat 2 40 0 432 228 18 9 chr10 126774716 126774830 -18814458 + MER110A LTR ERV1 352 466 -2 329 349 121 26 chr10 126776603 126776835 -18812453 - MIR SINE MIR -7 255 2 1673 204 14 27 chr10 126776913 126777280 -18812008 + MLT1A1 LTR MaLR 4 365 0 763 255 132 0 chr10 126779286 126779498 -18809790 + MIR SINE MIR 2 241 -21 1959 149 3 26 chr10 126779720 126780029 -18809259 - AluSx SINE Alu -10 302 1 1744 224 53 87 chr10 126780968 126784422 -18804866 - L1ME1 LINE L1 -338 7247 3735 318 225 14 49 chr10 126784443 126784585 -18804703 - L1ME4a LINE L1 -1 6120 5984 559 168 0 0 chr10 126784610 126784711 -18804577 - L1MB3 LINE L1 -9 6174 6074 759 241 40 10 chr10 126784711 126784966 -18804322 - L1ME1 LINE L1 -3900 3665 3487 268 389 23 38 chr10 126784966 126785108 -18804180 + L2 LINE L2 2826 2964 -308 2025 121 3 3 chr10 126785108 126785390 -18803898 - AluSq SINE Alu -31 282 1 268 389 23 38 chr10 126785390 126785509 -18803779 + L2 LINE L2 2964 3083 -189 27 49 0 0 chr10 126785531 126785572 -18803716 + AT_rich Low_complexity Low_complexity 1 41 0 863 37 0 0 chr10 126785745 126785852 -18803436 + L1PA4 LINE L1 6041 6147 -8 27 0 0 0 chr10 126785852 126785879 -18803409 + AT_rich Low_complexity Low_complexity 1 27 0 24 0 0 0 chr10 126786449 126786473 -18802815 + AT_rich Low_complexity Low_complexity 1 24 0 402 354 9 0 chr10 126787378 126787536 -18801752 + MIR SINE MIR 21 179 -56 467 33 16 0 chr10 126788011 126788072 -18801216 + (TG)n Simple_repeat Simple_repeat 2 63 0 246 231 0 0 chr10 126788999 126789051 -18800237 - L2 LINE L2 0 3313 3262 237 33 0 0 chr10 126789224 126789254 -18800034 + (CA)n Simple_repeat Simple_repeat 2 31 0 197 345 106 9 chr10 126790021 126790134 -18799154 - L2 LINE L2 -4 3309 3186 350 340 40 7 chr10 126791414 126791564 -18797724 - L2 LINE L2 -6 3266 3112 271 324 164 31 chr10 126791614 126791932 -18797356 + L2 LINE L2 2051 2410 -904 484 263 129 29 chr10 126793308 126793434 -18795854 + MIR SINE MIR 2 151 -111 2148 139 18 32 chr10 126793434 126793814 -18795474 + THE1C LTR MaLR 1 375 0 484 263 129 29 chr10 126793814 126793858 -18795430 + MIR SINE MIR 151 189 -73 977 107 0 0 chr10 126793891 126794040 -18795248 - L1PA7 LINE L1 -4015 2131 1983 * 23185 79 15 12 chr10 126794039 126798052 -18791236 + L1PA7 LINE L1 2128 6150 -4 682 304 198 5 chr10 126799118 126799623 -18789665 - LTR28 LTR ERV1 -455 1300 6 2294 75 3 0 chr10 126800646 126800961 -18788327 + AluSp SINE Alu 1 316 0 23 68 0 0 chr10 126802102 126802146 -18787142 + AT_rich Low_complexity Low_complexity 1 44 0 216 0 0 0 chr10 126802789 126802813 -18786475 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 258 220 0 0 chr10 126803020 126803070 -18786218 + L2 LINE L2 3261 3310 -3 309 283 22 83 chr10 126804198 126804378 -18784910 + MIR SINE MIR 25 193 -69 664 336 5 10 chr10 126805757 126805965 -18783323 - MIR SINE MIR -4 258 52 796 269 70 0 chr10 126806174 126806416 -18782872 - MIR SINE MIR 0 262 4 288 350 88 12 chr10 126807023 126807183 -18782105 + L2 LINE L2 181 352 -2962 698 256 153 22 chr10 126808351 126808672 -18780616 + LTR16A LTR ERVL 87 449 -1 1409 186 162 32 chr10 126809004 126809412 -18779876 - MLT1C LTR MaLR 0 467 7 423 0 0 0 chr10 126810080 126810127 -18779161 + (CA)n Simple_repeat Simple_repeat 1 47 0 321 227 0 0 chr10 126810485 126810560 -18778728 + MER116 DNA Mariner 6 80 0 403 327 25 19 chr10 126810573 126810735 -18778553 - MIR SINE MIR -18 244 82 665 271 88 4 chr10 126813024 126813264 -18776024 - MIR SINE MIR 0 262 3 609 259 93 0 chr10 126815056 126815218 -18774070 - MIR3 SINE MIR -1 207 31 737 278 52 20 chr10 126815339 126815591 -18773697 + MIR SINE MIR 3 262 0 197 276 153 31 chr10 126815690 126815788 -18773500 - L2 LINE L2 0 3272 3163 339 326 62 72 chr10 126815899 126816190 -18773098 - L2 LINE L2 -58 3214 2927 584 267 212 9 chr10 126816452 126816669 -18772619 + MIR SINE MIR 2 262 0 201 368 0 0 chr10 126819297 126819373 -18769915 + (TG)n Simple_repeat Simple_repeat 1 76 0 664 249 171 23 chr10 126819398 126819615 -18769673 + MIR SINE MIR 14 262 0 25 0 0 0 chr10 126819615 126819640 -18769648 + AT_rich Low_complexity Low_complexity 1 25 0 1550 176 60 15 chr10 126819734 126820045 -18769243 + L1MA9 LINE L1 5912 6241 -71 351 44 0 0 chr10 126820045 126820090 -18769198 + (TATATG)n Simple_repeat Simple_repeat 2 46 0 1550 176 60 15 chr10 126820090 126820114 -18769174 + L1MA9 LINE L1 6241 6262 -50 182 251 51 111 chr10 126821297 126821532 -18767756 + L2 LINE L2 3088 3308 -5 208 343 38 9 chr10 126822230 126822335 -18766953 - MIR SINE MIR -46 216 109 329 270 54 9 chr10 126822778 126822889 -18766399 + L1MC4 LINE L1 7926 8041 -1 23 0 0 0 chr10 126823962 126823985 -18765303 + AT_rich Low_complexity Low_complexity 1 23 0 642 256 56 47 chr10 126825067 126825282 -18764006 - MIR SINE MIR -36 226 10 632 217 37 12 chr10 126825549 126825710 -18763578 + MIR3 SINE MIR 24 188 -20 489 271 86 38 chr10 126826586 126826796 -18762492 - L2 LINE L2 -2 3311 3092 286 297 14 81 chr10 126827681 126827829 -18761459 + MIR3 SINE MIR 71 208 0 381 278 83 22 chr10 126827993 126828173 -18761115 + L2 LINE L2 3122 3312 -1 2424 90 3 0 chr10 126828752 126829062 -18760226 + AluSq SINE Alu 3 313 0 1758 129 8 80 chr10 126829140 126829503 -18759785 - MER1B DNA MER1_type 0 337 1 380 328 25 0 chr10 126829503 126829517 -18759771 - MIR SINE MIR -93 169 157 2669 145 2 36 chr10 126829517 126829966 -18759322 + Tigger2a DNA MER2_type 1 434 0 380 328 25 0 chr10 126829966 126830070 -18759218 - MIR SINE MIR -105 157 48 4239 98 11 10 chr10 126830698 126831319 -18757969 + L1PA10 LINE L1 5536 6157 -11 1754 175 27 38 chr10 126831495 126831860 -18757428 - MLT1A2 LTR MaLR -13 361 1 475 278 66 83 chr10 126833352 126833640 -18755648 - L3b LINE CR1 -193 1390 1108 761 181 0 8 chr10 126834440 126834573 -18754715 + FLAM_C SINE Alu 1 132 -11 4544 223 71 38 chr10 126835130 126836460 -18752828 + L1MC4a LINE L1 5412 6785 -1023 562 165 12 0 chr10 126936466 126936564 -18652724 + MLT1A1 LTR MaLR 260 344 -21 335 260 48 0 chr10 126936570 126936705 -18652583 + (TATATG)n Simple_repeat Simple_repeat 1 141 0 389 152 163 11 chr10 126936715 126936807 -18652481 - MLT1C LTR MaLR -356 111 6 1733 244 53 7 chr10 126937891 126938322 -18650966 + MLT1C LTR MaLR 8 458 -9 2214 173 51 29 chr10 126938836 126939100 -18650188 - L1ME2 LINE L1 -19 6145 5882 382 273 102 45 chr10 126939100 126939364 -18649924 - L1PB4 LINE L1 -276 5880 5602 217 324 27 0 chr10 126939436 126939510 -18649778 + MIR SINE MIR 37 112 -150 1457 218 23 25 chr10 126939604 126939958 -18649330 - MLT1A1 LTR MaLR -2 363 11 238 257 14 14 chr10 126939968 126940038 -18649250 + MIR SINE MIR 168 237 -25 495 296 75 49 chr10 126941166 126941433 -18647855 - L2 LINE L2 -5 3267 2994 1598 146 210 28 chr10 126941588 126941950 -18647338 - MSTA LTR MaLR 0 428 1 3347 181 20 28 chr10 126943284 126943937 -18645351 + L1MC3 LINE L1 6454 7101 -684 262 275 25 12 chr10 126943942 126944022 -18645266 + MLT1F1 LTR MaLR 45 125 -442 616 193 17 8 chr10 126944022 126944141 -18645147 + L1MC3 LINE L1 7190 7309 -476 599 181 105 8 chr10 126944141 126944274 -18645014 - MER7A DNA MER2_type -202 144 1 199 297 59 40 chr10 126944274 126944375 -18644913 + MIR SINE MIR 160 262 0 2121 128 3 0 chr10 126944398 126944696 -18644592 + AluSc SINE Alu 1 299 -10 417 20 0 0 chr10 126945015 126945065 -18644223 + (CA)n Simple_repeat Simple_repeat 1 50 0 220 322 140 28 chr10 126945584 126945727 -18643561 + MIR3 SINE MIR 41 199 -9 486 329 86 31 chr10 127048086 127048411 -18540877 - L2 LINE L2 -36 3277 2935 489 278 41 18 chr10 127048623 127048792 -18540496 + MIR SINE MIR 70 242 -20 205 283 22 33 chr10 127050245 127050337 -18538951 - L2 LINE L2 0 3313 3223 1147 194 4 26 chr10 127051524 127051751 -18537537 + AluJo SINE Alu 87 308 -4 424 280 88 8 chr10 127051751 127051876 -18537412 - MIR SINE MIR -122 140 6 2049 122 13 13 chr10 127052761 127053065 -18536223 + AluSx SINE Alu 1 304 -8 355 297 59 25 chr10 127053670 127053788 -18535500 - MER91A DNA MER1_type -57 139 18 239 278 150 23 chr10 127054124 127054257 -18535031 - MIR SINE MIR -112 150 1 186 302 115 36 chr10 127054921 127055060 -18534228 + L2 LINE L2 2935 3084 -188 1199 294 31 0 chr10 127055785 127056142 -18533146 + L1ME3 LINE L1 5627 5994 -168 461 253 92 23 chr10 127057951 127058125 -18531163 - L1ME4a LINE L1 -1 6120 5935 1840 60 13 0 chr10 127058729 127058961 -18530327 + AluSp SINE Alu 78 312 -1 273 256 47 0 chr10 127059257 127059343 -18529945 - L1ME4a LINE L1 -458 5663 5574 227 195 117 52 chr10 127059416 127059493 -18529795 - L2 LINE L2 0 3313 3232 * 409 271 173 8 chr10 127059470 127059603 -18529685 + MER5A DNA MER1_type 35 189 0 816 320 86 45 chr10 127059609 127059686 -18529602 + L2 LINE L2 2268 2340 -974 1938 169 21 56 chr10 127059686 127060064 -18529224 - MLT1A1 LTR MaLR 0 365 1 816 320 86 45 chr10 127060064 127060499 -18528789 + L2 LINE L2 2340 2801 -513 312 290 95 41 chr10 127060612 127060833 -18528455 + L2 LINE L2 3005 3237 -76 210 375 29 7 chr10 127060861 127060997 -18528291 + L2 LINE L2 2911 3049 -223 403 263 50 19 chr10 127061285 127061445 -18527843 - MLT1J1 LTR MaLR -279 167 3 990 115 57 25 chr10 127061750 127061907 -18527381 - AluSg/x SINE Alu -9 301 140 189 302 0 0 chr10 127062113 127062156 -18527132 - MIR SINE MIR -218 44 2 23 0 0 0 chr10 127065329 127065352 -18523936 + AT_rich Low_complexity Low_complexity 1 23 0 232 333 35 65 chr10 127065415 127065646 -18523642 - L2 LINE L2 -1286 2028 1805 189 354 13 0 chr10 127065819 127065898 -18523390 + MIR SINE MIR 72 151 -111 480 349 54 68 chr10 127068003 127068355 -18520933 - L2 LINE L2 -1 3271 2925 195 42 0 0 chr10 127068485 127068509 -18520779 + (CAT)n Simple_repeat Simple_repeat 3 26 0 363 309 74 60 chr10 127068889 127069225 -18520063 + L1MC/D LINE L1 4628 4968 -1178 529 295 30 17 chr10 127069502 127069540 -18519748 + L1MC/D LINE L1 5310 5346 -2462 234 0 0 0 chr10 127069540 127069566 -18519722 + (CATA)n Simple_repeat Simple_repeat 2 27 0 529 295 30 17 chr10 127069566 127069761 -18519527 + L1MC/D LINE L1 5346 5546 -2262 381 233 105 75 chr10 127069935 127070201 -18519087 - MER102a DNA MER1_type -10 320 47 311 309 15 29 chr10 127070204 127070340 -18518948 - L1ME4a LINE L1 -2297 5511 5378 2220 106 3 7 chr10 127070352 127070644 -18518644 - AluSc SINE Alu -18 291 1 2413 32 3 84 chr10 127071377 127071720 -18517568 - L1PA5 LINE L1 0 6154 5840 2273 108 3 0 chr10 127071720 127072027 -18517261 - AluSp SINE Alu -5 308 1 773 291 74 31 chr10 127072364 127072906 -18516382 + L1ME LINE L1 4672 5236 -910 1086 215 24 36 chr10 127072935 127073186 -18516102 - MIR SINE MIR -13 249 2 451 259 23 6 chr10 127073210 127073384 -18515904 + L1ME LINE L1 5259 5435 -735 194 0 0 37 chr10 127073939 127073966 -18515322 + (TTTTTG)n Simple_repeat Simple_repeat 5 30 0 195 42 0 0 chr10 127074160 127074184 -18515104 + (A)n Simple_repeat Simple_repeat 1 24 0 1289 256 50 39 chr10 127076324 127076782 -18512506 - LTR16B LTR ERVL 0 464 2 1881 148 0 33 chr10 127077645 127077949 -18511339 - AluJb SINE Alu -18 294 1 290 366 0 0 chr10 127078187 127078280 -18511008 + L2 LINE L2 3168 3260 -12 24 32 0 0 chr10 127078588 127078619 -18510669 + AT_rich Low_complexity Low_complexity 1 31 0 252 271 85 8 chr10 127078762 127078891 -18510397 + MIR SINE MIR 103 241 -21 237 222 56 0 chr10 127079287 127079341 -18509947 - MIR SINE MIR -51 211 155 641 120 0 104 chr10 127079346 127079471 -18509817 - MER46A DNA MER2_type -124 112 1 516 312 6 13 chr10 127079471 127079628 -18509660 - MIR SINE MIR -105 157 2 58 15 0 0 chr10 127080130 127080195 -18509093 + AT_rich Low_complexity Low_complexity 1 65 0 1544 203 117 34 chr10 127080638 127081082 -18508206 - MLT1D LTR MaLR -24 481 1 278 298 32 34 chr10 127081638 127081762 -18507526 + MIR SINE MIR 45 166 -65 216 0 0 0 chr10 127082041 127082065 -18507223 + (A)n Simple_repeat Simple_repeat 1 24 0 198 0 0 0 chr10 127083418 127083440 -18505848 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 1675 170 22 4 chr10 127083442 127083719 -18505569 - AluSx SINE Alu -30 282 1 207 0 0 0 chr10 127083729 127083752 -18505536 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2050 108 18 4 chr10 127083755 127084033 -18505255 - AluSq SINE Alu -31 282 1 231 191 22 146 chr10 127084037 127084126 -18505162 - MIR SINE MIR -63 145 68 216 0 0 0 chr10 127084836 127084860 -18504428 + (TG)n Simple_repeat Simple_repeat 1 24 0 606 280 34 17 chr10 127084861 127085100 -18504188 + L1ME LINE L1 5505 5747 -374 187 282 0 28 chr10 127085315 127085386 -18503902 + MIR SINE MIR 60 128 -134 537 310 56 13 chr10 127085792 127086024 -18503264 + MIR SINE MIR 21 262 0 2295 138 16 21 chr10 127086345 127086722 -18502566 + THE1C LTR MaLR 1 375 0 397 337 41 31 chr10 127087171 127087408 -18501880 + MIR SINE MIR 8 250 -12 2398 64 0 3 chr10 127087535 127087831 -18501457 + AluY SINE Alu 1 295 -16 223 276 67 38 chr10 127087855 127087960 -18501328 - L2 LINE L2 -54 3259 3152 242 325 84 39 chr10 127089520 127089608 -18499680 + MIR SINE MIR 49 148 -114 2405 71 13 13 chr10 127089608 127089916 -18499372 + AluY SINE Alu 1 308 -3 242 325 84 39 chr10 127089916 127089981 -18499307 + MIR SINE MIR 148 209 -53 2107 128 3 7 chr10 127090518 127090822 -18498466 - AluSx SINE Alu -9 303 1 187 316 140 35 chr10 127091068 127091182 -18498106 - L2 LINE L2 -3162 152 27 259 192 27 0 chr10 127092015 127092088 -18497200 + (TA)n Simple_repeat Simple_repeat 2 76 0 1729 189 23 9 chr10 127092088 127092437 -18496851 - MLT1A1 LTR MaLR -1 364 11 243 188 0 0 chr10 127093804 127093852 -18495436 + L1MA10 LINE L1 6280 6327 -7 21 57 0 0 chr10 127094777 127094812 -18494476 + AT_rich Low_complexity Low_complexity 1 35 0 812 228 6 6 chr10 127094891 127095049 -18494239 - FRAM SINE Alu -8 158 1 232 231 19 0 chr10 127095626 127095678 -18493610 + (TA)n Simple_repeat Simple_repeat 1 53 0 8307 116 8 2 chr10 127095701 127097730 -18491558 - L1PA8A LINE L1 -3 6128 4090 12559 112 9 7 chr10 127097733 127099769 -18489519 + L1PA8A LINE L1 2042 4081 -2065 238 281 0 0 chr10 127100469 127100526 -18488762 + MIR3 SINE MIR 149 205 -3 22 0 0 0 chr10 127103384 127103406 -18485882 + AT_rich Low_complexity Low_complexity 1 22 0 311 345 18 0 chr10 127106487 127106597 -18482691 + MLT1J1 LTR MaLR 210 321 -125 277 241 13 13 chr10 127106654 127106733 -18482555 + MLT1J2 LTR MaLR 361 439 -11 328 325 68 47 chr10 127106752 127106986 -18482302 + L2 LINE L2 2204 2442 -872 418 333 123 31 chr10 127107027 127107477 -18481811 + L2 LINE L2 2575 3058 -214 199 339 0 0 chr10 127107704 127107769 -18481519 + MIR SINE MIR 188 252 -10 458 291 70 40 chr10 127107960 127108159 -18481129 + MIR SINE MIR 8 212 -50 201 152 0 0 chr10 127108614 127108647 -18480641 + (ATG)n Simple_repeat Simple_repeat 3 35 0 225 191 250 0 chr10 127108649 127108717 -18480571 - MIR SINE MIR -7 255 171 630 183 0 69 chr10 127108743 127108874 -18480414 + L2 LINE L2 3187 3308 -5 25 75 0 0 chr10 127108968 127109021 -18480267 + AT_rich Low_complexity Low_complexity 1 53 0 3282 137 13 31 chr10 127110959 127111573 -18477715 + L1MA7 LINE L1 5687 6289 -2 2581 175 65 6 chr10 127112419 127112946 -18476342 - MER89 LTR ERV1 -1 558 1 329 0 24 0 chr10 127113092 127113133 -18476155 + (TC)n Simple_repeat Simple_repeat 2 43 0 184 335 130 42 chr10 127114666 127114950 -18474338 + L2 LINE L2 1751 2059 -1255 5305 151 15 21 chr10 127115638 127116668 -18472620 + L1MC2 LINE L1 5190 6317 -27 23 54 0 0 chr10 127116704 127116741 -18472547 + AT_rich Low_complexity Low_complexity 1 37 0 222 262 151 0 chr10 127120206 127120350 -18468938 + MIR SINE MIR 43 208 -54 247 336 9 9 chr10 127120940 127121050 -18468238 - MER5B DNA MER1_type -68 110 1 26 30 0 0 chr10 127123729 127123762 -18465526 + AT_rich Low_complexity Low_complexity 1 33 0 1915 125 9 58 chr10 127126904 127127231 -18462057 - AluSx SINE Alu -1 311 1 756 215 70 0 chr10 127127250 127127422 -18461866 - MER5A DNA MER1_type 0 189 6 233 263 270 0 chr10 127128379 127128531 -18460757 - MIR SINE MIR -21 241 49 195 42 0 0 chr10 127129419 127129443 -18459845 + (T)n Simple_repeat Simple_repeat 1 24 0 914 265 125 58 chr10 127131498 127132067 -18457221 - MLT1L LTR MaLR -2 613 7 1643 219 28 77 chr10 127132382 127132879 -18456409 + MLT1D LTR MaLR 29 501 -4 234 0 0 0 chr10 127134058 127134084 -18455204 + (TG)n Simple_repeat Simple_repeat 1 26 0 585 241 111 42 chr10 127135785 127136001 -18453287 + MIR SINE MIR 31 261 -1 246 269 240 12 chr10 127136329 127136500 -18452788 - MIR SINE MIR -21 241 32 195 318 34 0 chr10 127137958 127138046 -18451242 + MIR SINE MIR 21 111 -151 707 258 163 53 chr10 127138506 127138735 -18450553 - L2 LINE L2 -22 3291 3089 2090 119 68 14 chr10 127138735 127139088 -18450200 + THE1C LTR MaLR 4 375 0 707 258 163 53 chr10 127139088 127139377 -18449911 - L2 LINE L2 -224 3089 2709 1192 244 120 24 chr10 127139727 127140092 -18449196 - L1ME3A LINE L1 -2 6168 5747 2772 80 13 8 chr10 127140092 127140465 -18448823 - THE1C LTR MaLR 0 375 1 1192 244 120 24 chr10 127140465 127140567 -18448721 - L1ME3A LINE L1 -423 5747 5656 308 322 44 33 chr10 127140611 127140791 -18448497 - L2 LINE L2 -606 2708 2527 2107 138 0 25 chr10 127142620 127142798 -18446490 - AluSx SINE Alu -1 311 143 2189 114 0 3 chr10 127142798 127143097 -18446191 - AluSc SINE Alu -11 298 1 2107 138 0 25 chr10 127143097 127143237 -18446051 - AluSx SINE Alu -169 143 1 198 247 0 86 chr10 127143354 127143435 -18445853 - MIR SINE MIR -70 192 119 466 156 26 0 chr10 127144702 127144779 -18444509 + MADE1 DNA Mariner 2 80 0 1736 112 4 4 chr10 127145426 127145659 -18443629 - AluSq SINE Alu -80 233 1 2420 212 95 53 chr10 127145724 127146007 -18443281 - L1ME1 LINE L1 -15 6151 5881 729 144 8 40 chr10 127146007 127146132 -18443156 + FLAM_A SINE Alu 1 121 -12 2420 212 95 53 chr10 127146132 127146533 -18442755 - L1ME1 LINE L1 -285 5881 5438 622 114 0 0 chr10 127146566 127146654 -18442634 + MER89 LTR ERV1 1 88 -471 * 1394 202 118 6 chr10 127146628 127146950 -18442338 + MER89 LTR ERV1 197 554 -5 21 36 0 0 chr10 127149258 127149286 -18440002 + AT_rich Low_complexity Low_complexity 1 28 0 368 240 92 11 chr10 127150129 127150315 -18438973 + MIR SINE MIR 35 236 -26 494 281 58 12 chr10 127150432 127150603 -18438685 + MIR SINE MIR 78 256 -6 895 255 86 104 chr10 127151076 127151549 -18437739 - L1MC4a LINE L1 -1834 5974 5517 1886 161 13 0 chr10 127151549 127151848 -18437440 + AluJo SINE Alu 5 307 -5 895 255 86 104 chr10 127151848 127152107 -18437181 - L1MC4a LINE L1 -2291 5517 5255 202 204 0 19 chr10 127152261 127152315 -18436973 + L2 LINE L2 3009 3061 -211 206 284 104 30 chr10 127152399 127152533 -18436755 + MIR3 SINE MIR 16 159 -49 180 273 0 18 chr10 127152549 127152604 -18436684 + MER5B DNA MER1_type 33 86 -92 267 31 0 0 chr10 127152649 127152681 -18436607 + (TTA)n Simple_repeat Simple_repeat 1 32 0 2137 126 0 0 chr10 127152690 127152976 -18436312 - AluSx SINE Alu -26 286 1 199 324 111 59 chr10 127155062 127155357 -18433931 - L2 LINE L2 -50 3222 2907 424 200 303 0 chr10 127155357 127155502 -18433786 + MER5A DNA MER1_type 1 189 0 199 324 111 59 chr10 127155502 127155530 -18433758 - L2 LINE L2 -365 2907 2882 5051 246 56 10 chr10 127155732 127156467 -18432821 + L1ME1 LINE L1 2499 3199 -2947 186 43 0 0 chr10 127156467 127156490 -18432798 + (GA)n Simple_repeat Simple_repeat 2 24 0 5051 246 56 10 chr10 127156490 127157763 -18431525 + L1ME1 LINE L1 3199 4604 -1542 2234 219 76 50 chr10 127157788 127157928 -18431360 + MLT1E2 LTR MaLR 5 140 -486 2465 116 3 49 chr10 127157928 127158317 -18430971 - MER51B LTR ERV1 -2 375 5 2234 219 76 50 chr10 127158317 127158782 -18430506 + MLT1E2 LTR MaLR 140 626 0 3441 196 53 44 chr10 127158782 127159570 -18429718 + L1ME1 LINE L1 4627 5406 -760 1514 132 71 122 chr10 127159570 127159965 -18429323 - THE1C LTR MaLR 0 375 1 3441 196 53 44 chr10 127159965 127160542 -18428746 + L1ME1 LINE L1 5406 5976 -190 3044 173 15 2 chr10 127160542 127161084 -18428204 + L1MB3 LINE L1 5628 6176 -7 3441 196 53 44 chr10 127161084 127161205 -18428083 + L1ME1 LINE L1 5976 6130 -36 1451 187 0 78 chr10 127161205 127161526 -18427762 + AluJb SINE Alu 1 296 -16 3441 196 53 44 chr10 127161526 127161555 -18427733 + L1ME1 LINE L1 6130 6157 -9 1745 213 65 31 chr10 127162132 127162579 -18426709 - MLT1C LTR MaLR 0 467 6 339 307 10 0 chr10 127163375 127163476 -18425812 - MLT1L LTR MaLR -372 243 142 1355 229 104 3 chr10 127163643 127163971 -18425317 - MLT1A1 LTR MaLR -2 363 3 2452 129 8 11 chr10 127164330 127164702 -18424586 + THE1C LTR MaLR 5 375 0 312 265 0 0 chr10 127166243 127166311 -18422977 + L2 LINE L2 3174 3241 -31 801 244 61 0 chr10 127166832 127166996 -18422292 - MER63A DNA MER1_type 0 210 37 199 292 42 42 chr10 127167289 127167361 -18421927 - L2 LINE L2 -6 3266 3195 22 0 0 0 chr10 127168040 127168062 -18421226 + AT_rich Low_complexity Low_complexity 1 22 0 493 220 30 0 chr10 127168814 127168914 -18420374 + MLT1B LTR MaLR 1 103 -364 4298 95 13 4 chr10 127168998 127169547 -18419741 - MER41A LTR ERV1 0 554 1 518 255 75 122 chr10 127169547 127169841 -18419447 + MLT1B LTR MaLR 99 378 -12 544 173 144 0 chr10 127172379 127172483 -18416805 + MER33 DNA MER1_type 1 119 -205 437 177 54 102 chr10 127172489 127172636 -18416652 + MER33 DNA MER1_type 224 363 0 418 331 13 13 chr10 127172657 127172808 -18416480 - MIR SINE MIR -111 151 1 857 180 184 11 chr10 127174622 127174894 -18414394 - MER33 DNA MER1_type -4 320 2 1924 116 59 93 chr10 127174912 127175300 -18413988 + THE1C LTR MaLR 1 375 0 644 275 22 11 chr10 127175732 127175914 -18413374 + MIR SINE MIR 2 185 -77 1855 113 50 25 chr10 127176361 127176643 -18412645 - AluSc SINE Alu -20 289 1 341 177 0 44 chr10 127177478 127177591 -18411697 + CT-rich Low_complexity Low_complexity 5 112 0 956 218 10 5 chr10 127178761 127178963 -18410325 - MER3 DNA MER1_type 0 209 7 465 83 28 0 chr10 127179076 127179148 -18410140 - LTR37A LTR ERV1 -54 372 299 252 140 60 0 chr10 127179157 127179207 -18410081 - L1MB5 LINE L1 0 6174 6122 202 309 30 55 chr10 127179238 127179403 -18409885 - L2 LINE L2 -608 2706 2546 221 254 16 0 chr10 127179713 127179776 -18409512 + GA-rich Low_complexity Low_complexity 5 68 0 301 325 89 24 chr10 127179781 127179904 -18409384 - L2 LINE L2 -5 3267 3137 392 287 91 17 chr10 127180535 127180767 -18408521 - L1MC4a LINE L1 -298 5823 5659 14028 138 19 16 chr10 127180804 127182259 -18407029 + Tigger1 DNA MER2_type 10 1459 -959 1601 191 3 41 chr10 127182259 127182578 -18406710 + AluJo SINE Alu 1 307 -5 14028 138 19 16 chr10 127182578 127183175 -18406113 + Tigger1 DNA MER2_type 1459 2072 -346 2345 90 0 7 chr10 127183175 127183474 -18405814 + AluSp SINE Alu 1 297 -16 14028 138 19 16 chr10 127183474 127183642 -18405646 + Tigger1 DNA MER2_type 2072 2238 -180 2726 165 27 108 chr10 127183677 127184353 -18404935 - LTR9 LTR ERV1 0 794 1 707 186 35 0 chr10 127184354 127184499 -18404789 - L1M4 LINE L1 -1371 4775 4626 1425 254 138 39 chr10 127184565 127184779 -18404509 - L1MEc LINE L1 -4760 1636 1445 2268 63 4 0 chr10 127184779 127185071 -18404217 - AluY SINE Alu 0 309 17 1425 254 138 39 chr10 127185071 127185125 -18404163 - L1MEc LINE L1 -4951 1445 1398 2517 141 0 5 chr10 127185125 127185493 -18403795 + MER47A DNA MER2_type 1 366 0 1425 254 138 39 chr10 127185493 127186027 -18403261 - L1MEc LINE L1 -4998 1398 751 382 337 16 58 chr10 127186038 127186228 -18403060 + L2 LINE L2 3091 3272 0 373 238 109 95 chr10 127186275 127186740 -18402548 - MLT1F1 LTR MaLR 0 567 87 2321 89 0 16 chr10 127188832 127189136 -18400152 + AluSg SINE Alu 1 299 -11 1842 72 64 16 chr10 127190351 127190601 -18398687 - L1PA10 LINE L1 0 6168 5907 235 189 0 0 chr10 127190735 127190772 -18398516 - L2 LINE L2 -19 3253 3217 824 280 73 53 chr10 127191096 127191546 -18397742 + L2 LINE L2 2854 3312 -1 221 255 255 27 chr10 127191727 127191876 -18397412 + MIR SINE MIR 77 259 -3 456 277 202 19 chr10 127193330 127193543 -18395745 + MIR SINE MIR 2 253 -9 2158 127 50 42 chr10 127193609 127193970 -18395318 - THE1B LTR MaLR 0 364 1 296 258 0 31 chr10 127194292 127194370 -18394918 + MER113 DNA MER1_type? 4 80 -441 1194 204 81 0 chr10 127194370 127194591 -18394697 - MER8 DNA MER2_type 0 239 1 296 258 0 31 chr10 127194591 127194609 -18394679 + MER113 DNA MER1_type? 80 97 -424 22 35 0 0 chr10 127195475 127195504 -18393784 + AT_rich Low_complexity Low_complexity 1 29 0 249 231 62 0 chr10 127197357 127197422 -18391866 + L3b LINE CR1 1325 1393 -190 232 290 203 0 chr10 127198044 127198182 -18391106 - Charlie8 DNA MER1_type -2240 177 12 1805 142 0 83 chr10 127198222 127198547 -18390741 - AluJo SINE Alu -14 298 1 275 330 9 27 chr10 127199587 127199699 -18389589 - MIR SINE MIR -19 243 134 228 294 76 22 chr10 127199670 127199762 -18389526 + L2 LINE L2 3128 3224 -48 * 1575 203 42 12 chr10 127199809 127200139 -18389149 + MLT2D LTR ERVL 1 340 -74 201 161 0 0 chr10 127200141 127200172 -18389116 + (TG)n Simple_repeat Simple_repeat 2 32 0 1270 204 34 36 chr10 127200172 127200542 -18388746 + L1MB8 LINE L1 5730 6101 -82 526 138 14 152 chr10 127200938 127201083 -18388205 + L1MB8 LINE L1 6054 6178 0 621 186 115 24 chr10 127201127 127201287 -18388001 + MER5A DNA MER1_type 4 186 -3 414 301 117 25 chr10 127201850 127202046 -18387242 - MIR SINE MIR -24 238 25 1418 239 140 10 chr10 127203018 127203424 -18385864 - MLT1H LTR MaLR -90 459 1 2138 144 0 3 chr10 127203638 127203951 -18385337 + AluSx SINE Alu 1 312 0 710 297 53 37 chr10 127204073 127204319 -18384969 + MIR SINE MIR 9 258 -4 817 185 0 13 chr10 127204673 127204824 -18384464 - L1MB8 LINE L1 -34 6144 5996 314 331 38 8 chr10 127204915 127205048 -18384240 - L2 LINE L2 -457 2857 2721 2723 17 0 0 chr10 127205057 127205351 -18383937 - AluYa5 SINE Alu -17 294 1 4329 238 23 22 chr10 127205357 127206894 -18382394 - L1MEc LINE L1 -2987 3142 1644 1016 236 29 113 chr10 127206918 127207305 -18381983 - L1M4c LINE L1 -4452 2111 1648 14382 44 1 0 chr10 127207305 127209741 -18379547 - L1PA5 LINE L1 -7 6147 3714 1016 236 29 113 chr10 127209741 127209966 -18379322 - L1M4c LINE L1 -4915 1648 1406 253 272 33 22 chr10 127210058 127210150 -18379138 - L1MDa LINE L1 -3404 2725 2633 434 275 106 18 chr10 127210261 127210552 -18378736 - L1MDa LINE L1 -4516 1613 1314 1136 154 58 34 chr10 127210789 127210997 -18378291 - MER20 DNA MER1_type -5 214 2 235 232 168 32 chr10 127211000 127211125 -18378163 - L1MDa LINE L1 -4993 1126 985 784 316 95 38 chr10 127211239 127212004 -18377284 - L1MDa LINE L1 -5297 822 14 200 238 0 0 chr10 127212483 127212525 -18376763 + (TAA)n Simple_repeat Simple_repeat 2 43 0 2384 244 59 19 chr10 127213094 127213742 -18375546 - L1MC4 LINE L1 -129 7913 7240 1893 238 125 16 chr10 127213744 127214302 -18374986 - L1MC4 LINE L1 -957 7085 6467 1076 187 109 0 chr10 127215057 127215314 -18373974 - L1MD3 LINE L1 0 7995 7711 1779 164 55 30 chr10 127216267 127216632 -18372656 + THE1C LTR MaLR 2 375 0 257 290 0 0 chr10 127216918 127216980 -18372308 - L1ME4a LINE L1 -70 6051 5990 209 296 0 0 chr10 127217122 127217176 -18372112 + MIR SINE MIR 206 259 -3 283 279 154 0 chr10 127218179 127218283 -18371005 + MIR SINE MIR 128 247 -15 561 227 163 23 chr10 127219067 127219239 -18370049 + MIR SINE MIR 59 254 -8 464 284 64 14 chr10 127219413 127219554 -18369734 + MER5A DNA MER1_type 7 154 -35 1749 125 50 0 chr10 127220905 127221185 -18368103 + AluJb SINE Alu 1 294 -18 370 239 0 23 chr10 127221320 127221408 -18367880 - MIR SINE MIR -80 182 97 2433 103 6 29 chr10 127221488 127222051 -18367237 + MER51A LTR ERV1 1 634 0 395 253 163 16 chr10 127222946 127223136 -18366152 + MIR SINE MIR 2 219 -43 811 88 0 0 chr10 127223662 127223776 -18365512 + AluY SINE Alu 198 311 0 7649 22 23 0 chr10 127224826 127225828 -18363460 - L1PA4 LINE L1 0 6155 5142 452 270 107 42 chr10 127226187 127226421 -18362867 + MIR SINE MIR 15 262 0 279 154 58 29 chr10 127226912 127227016 -18362272 + (TCTA)n Simple_repeat Simple_repeat 4 110 0 354 130 41 53 chr10 127227028 127227197 -18362091 + (TCTA)n Simple_repeat Simple_repeat 4 170 0 683 269 67 41 chr10 127227281 127227675 -18361613 - L1MC4a LINE L1 -302 5819 5537 552 212 128 64 chr10 127228994 127229197 -18360091 + MER20 DNA MER1_type 4 219 0 28 0 0 0 chr10 127230321 127230349 -18358939 + AT_rich Low_complexity Low_complexity 1 28 0 339 25 0 0 chr10 127230411 127230451 -18358837 + (TG)n Simple_repeat Simple_repeat 1 40 0 187 229 62 0 chr10 127231607 127231655 -18357633 - L2 LINE L2 -5 3267 3217 390 101 0 0 chr10 127236450 127236519 -18352769 + (CAT)n Simple_repeat Simple_repeat 2 70 0 242 286 158 23 chr10 127237335 127237468 -18351820 - MIR3 SINE MIR -45 163 13 189 238 24 0 chr10 127237561 127237603 -18351685 + MIR SINE MIR 120 162 -100 962 149 140 9 chr10 127238152 127238374 -18350914 - MER33 DNA MER1_type -24 300 50 409 273 116 8 chr10 127238561 127238682 -18350606 - L2 LINE L2 0 3272 3139 445 274 32 8 chr10 127238968 127239092 -18350196 - MIR3 SINE MIR -48 160 34 198 0 0 0 chr10 127243172 127243194 -18346094 + (T)n Simple_repeat Simple_repeat 1 22 0 2034 107 0 3 chr10 127244892 127245205 -18344083 + AluSg SINE Alu 1 310 0 401 269 35 21 chr10 127246566 127246707 -18342581 - MIR SINE MIR -116 146 4 255 282 176 0 chr10 127246716 127246847 -18342441 - MIR SINE MIR -65 197 44 2279 66 3 0 chr10 127248166 127248455 -18340833 - AluY SINE Alu -21 290 1 1166 181 33 5 chr10 127251531 127251741 -18337547 + MLT1A2 LTR MaLR 159 374 0 1060 185 47 9 chr10 127251940 127252151 -18337137 + MER20 DNA MER1_type 1 219 0 599 278 62 24 chr10 127252558 127252767 -18336521 - MIR SINE MIR 0 262 46 755 123 33 8 chr10 127252791 127252913 -18336375 + L1PB1 LINE L1 6024 6148 -3 21 0 0 0 chr10 127252952 127252973 -18336315 + AT_rich Low_complexity Low_complexity 1 21 0 1462 255 75 83 chr10 127253017 127253739 -18335549 + MER21B LTR ERV1 24 739 -124 390 247 0 0 chr10 127253967 127254044 -18335244 + MIR SINE MIR 110 186 -76 292 242 0 0 chr10 127254162 127254224 -18335064 - MER113 DNA MER1_type? -1 520 459 29 28 0 0 chr10 127254240 127254276 -18335012 + AT_rich Low_complexity Low_complexity 1 36 0 272 227 0 0 chr10 127254378 127254444 -18334844 - MER113 DNA MER1_type? -420 101 36 2114 96 10 26 chr10 127254877 127255189 -18334099 - AluSp SINE Alu -6 307 1 180 290 43 29 chr10 127255488 127255557 -18333731 - MIR SINE MIR -173 89 20 495 0 0 0 chr10 127257173 127257228 -18332060 + (CA)n Simple_repeat Simple_repeat 2 56 0 292 346 16 16 chr10 127258459 127258586 -18330702 + MIR SINE MIR 57 183 -79 272 275 140 31 chr10 127258782 127258975 -18330313 - MIR SINE MIR -38 224 11 1656 111 4 0 chr10 127259227 127259461 -18329827 - AluSg/x SINE Alu -7 303 69 234 351 21 73 chr10 127260167 127260358 -18328930 + MIR3 SINE MIR 16 196 -12 267 287 56 19 chr10 127260853 127260961 -18328327 + MIR SINE MIR 20 131 -131 2407 65 0 3 chr10 127261053 127261362 -18327926 + AluY SINE Alu 3 310 -1 201 246 33 16 chr10 127261863 127261924 -18327364 - MIR3 SINE MIR -36 172 111 221 268 0 18 chr10 127262567 127262623 -18326665 - L2 LINE L2 -8 3264 3210 189 0 0 0 chr10 127262845 127262866 -18326422 + (A)n Simple_repeat Simple_repeat 1 21 0 887 238 90 46 chr10 127263623 127263946 -18325342 - L2 LINE L2 0 3313 2977 357 82 0 0 chr10 127264496 127264545 -18324743 + (CA)n Simple_repeat Simple_repeat 2 50 0 246 62 0 0 chr10 127264806 127264838 -18324450 + (TG)n Simple_repeat Simple_repeat 1 32 0 187 230 65 108 chr10 127265121 127265260 -18324028 + MIR SINE MIR 124 256 -6 216 97 0 0 chr10 127268877 127268908 -18320380 + (T)n Simple_repeat Simple_repeat 1 31 0 264 59 0 0 chr10 127269275 127269309 -18319979 + (CA)n Simple_repeat Simple_repeat 1 34 0 210 239 30 142 chr10 127271416 127271550 -18317738 - MIR SINE MIR -38 224 106 234 219 137 14 chr10 127271554 127271627 -18317661 - MER63 DNA MER1_type 0 1061 980 * 578 261 8 0 chr10 127271620 127271750 -18317538 - MER63 DNA MER1_type -298 764 8 180 402 47 0 chr10 127272085 127272192 -18317096 - L2 LINE L2 -50 3222 3111 288 315 148 20 chr10 127272233 127272436 -18316852 - MIR SINE MIR 0 262 34 343 273 36 18 chr10 127272473 127272583 -18316705 - L2 LINE L2 -227 3045 2934 735 310 20 20 chr10 127272610 127272855 -18316433 - MIR SINE MIR -10 252 8 322 309 19 74 chr10 127272904 127273066 -18316222 - L2 LINE L2 -467 2847 2695 23 0 0 0 chr10 127273940 127273963 -18315325 + AT_rich Low_complexity Low_complexity 1 23 0 267 319 55 0 chr10 127274452 127274543 -18314745 - MIR3 SINE MIR -46 162 67 2273 127 33 28 chr10 127274875 127275236 -18314052 - THE1B LTR MaLR 0 364 2 420 298 7 43 chr10 127275413 127275554 -18313734 + MIR SINE MIR 8 143 -119 1674 187 111 27 chr10 127278262 127278705 -18310583 + MLT1D LTR MaLR 22 501 -4 266 368 35 0 chr10 127278744 127278831 -18310457 + MIR SINE MIR 26 115 -147 1374 145 64 0 chr10 127278839 127279073 -18310215 + MSTA LTR MaLR 1 249 -179 2310 148 74 17 chr10 127279136 127279541 -18309747 + MSTA LTR MaLR 1 428 0 186 283 126 89 chr10 127280813 127281060 -18308228 - L3b LINE CR1 -142 1441 1186 283 270 0 0 chr10 127281234 127281297 -18307991 + L2 LINE L2 3251 3313 0 324 279 120 38 chr10 127281464 127281647 -18307641 - MIR SINE MIR -41 221 24 277 316 143 15 chr10 127282276 127282409 -18306879 + MIR SINE MIR 109 258 -4 342 284 164 8 chr10 127282651 127282785 -18306503 - MIR SINE MIR -14 248 94 221 203 119 0 chr10 127283030 127283089 -18306199 + L2 LINE L2 3169 3234 -38 440 150 62 0 chr10 127284118 127284198 -18305090 + MER5A DNA MER1_type 23 107 -82 494 252 24 0 chr10 127285394 127285521 -18303767 + Charlie1 DNA MER1_type 1 130 -2631 * 1269 176 32 38 chr10 127285518 127285831 -18303457 + Charlie1 DNA MER1_type 2449 2759 -2 218 264 0 0 chr10 127286249 127286302 -18302986 + MIR SINE MIR 201 253 -9 782 165 0 30 chr10 127286962 127287095 -18302193 - FLAM_A SINE Alu 0 133 5 370 283 131 40 chr10 127287212 127287410 -18301878 - MIR SINE MIR -11 251 36 186 71 0 0 chr10 127287881 127287909 -18301379 + (CAGCC)n Simple_repeat Simple_repeat 4 31 0 1044 126 0 0 chr10 127288500 127288643 -18300645 - AluSp/q SINE Alu -17 296 154 226 298 20 80 chr10 127289727 127289878 -18299410 + L2 LINE L2 3016 3157 -115 1140 119 0 0 chr10 127289926 127290103 -18299185 + (TGGA)n Simple_repeat Simple_repeat 3 179 0 191 217 17 0 chr10 127290154 127290214 -18299074 + (TGGA)n Simple_repeat Simple_repeat 4 64 0 201 274 195 55 chr10 127290249 127290577 -18298711 + L2 LINE L2 1903 2276 -1038 1422 188 0 49 chr10 127292768 127293056 -18296232 + AluJo SINE Alu 39 312 0 1993 151 13 0 chr10 127296342 127296646 -18292642 - AluSx SINE Alu -4 308 1 2389 105 0 3 chr10 127296658 127296972 -18292316 - AluSq SINE Alu 0 313 1 1697 179 40 10 chr10 127297877 127298173 -18291115 - AluJo SINE Alu -7 305 1 1616 147 8 12 chr10 127298223 127298482 -18290806 + AluSq SINE Alu 9 266 -47 187 192 27 14 chr10 127298592 127298665 -18290623 + CT-rich Low_complexity Low_complexity 2 75 0 300 346 16 16 chr10 127298963 127299090 -18290198 + MIR SINE MIR 57 183 -79 276 282 133 36 chr10 127299286 127299481 -18289807 - MIR SINE MIR -38 224 11 1775 117 4 0 chr10 127299727 127299966 -18289322 - AluSg/x SINE Alu -2 308 69 248 351 21 73 chr10 127300674 127300865 -18288423 + MIR3 SINE MIR 16 196 -12 273 287 56 19 chr10 127301361 127301469 -18287819 + MIR SINE MIR 20 131 -131 2472 58 0 13 chr10 127301561 127301873 -18287415 + AluY SINE Alu 3 310 -1 200 246 33 16 chr10 127302382 127302443 -18286845 - MIR3 SINE MIR -36 172 111 223 268 0 18 chr10 127303086 127303142 -18286146 - L2 LINE L2 -8 3264 3210 198 0 0 0 chr10 127303364 127303386 -18285902 + (A)n Simple_repeat Simple_repeat 1 22 0 882 239 93 47 chr10 127304143 127304465 -18284823 - L2 LINE L2 0 3313 2977 411 73 0 0 chr10 127305015 127305070 -18284218 + (CA)n Simple_repeat Simple_repeat 2 56 0 225 94 0 0 chr10 127305331 127305363 -18283925 + (TG)n Simple_repeat Simple_repeat 1 32 0 183 243 57 107 chr10 127305646 127305786 -18283502 + MIR SINE MIR 124 256 -6 216 97 0 0 chr10 127309406 127309437 -18279851 + (T)n Simple_repeat Simple_repeat 1 31 0 297 75 0 0 chr10 127309804 127309844 -18279444 + (CA)n Simple_repeat Simple_repeat 1 40 0 210 239 30 142 chr10 127311951 127312085 -18277203 - MIR SINE MIR -38 224 106 234 219 137 14 chr10 127312089 127312162 -18277126 - MER63 DNA MER1_type 0 1061 980 * 578 261 8 0 chr10 127312155 127312285 -18277003 - MER63 DNA MER1_type -298 764 8 180 402 47 0 chr10 127312620 127312727 -18276561 - L2 LINE L2 -50 3222 3111 283 320 148 20 chr10 127312768 127312971 -18276317 - MIR SINE MIR 0 262 34 343 273 36 18 chr10 127313008 127313118 -18276170 - L2 LINE L2 -227 3045 2934 735 310 20 20 chr10 127313145 127313390 -18275898 - MIR SINE MIR -10 252 8 322 309 19 74 chr10 127313439 127313601 -18275687 - L2 LINE L2 -467 2847 2695 23 0 0 0 chr10 127314475 127314498 -18274790 + AT_rich Low_complexity Low_complexity 1 23 0 267 319 55 0 chr10 127314987 127315078 -18274210 - MIR3 SINE MIR -46 162 67 2281 125 33 28 chr10 127315410 127315771 -18273517 - THE1B LTR MaLR 0 364 2 395 305 7 43 chr10 127315948 127316089 -18273199 + MIR SINE MIR 8 143 -119 1792 191 111 30 chr10 127318765 127319240 -18270048 + MLT1D LTR MaLR 1 501 -4 265 345 0 0 chr10 127319296 127319374 -18269914 + MIR SINE MIR 47 124 -84 1451 145 64 0 chr10 127319374 127319608 -18269680 + MSTA LTR MaLR 1 249 -179 2234 151 74 17 chr10 127319671 127320076 -18269212 + MSTA LTR MaLR 1 428 0 258 270 0 0 chr10 127321769 127321832 -18267456 + L2 LINE L2 3251 3313 0 224 238 36 12 chr10 127322062 127322146 -18267142 - MIR SINE MIR -62 146 61 205 316 143 15 chr10 127322809 127322942 -18266346 + MIR SINE MIR 109 258 -4 293 269 164 8 chr10 127323184 127323318 -18265970 - MIR SINE MIR -14 248 94 191 203 119 0 chr10 127323563 127323622 -18265666 + L2 LINE L2 3169 3234 -38 403 150 62 0 chr10 127324650 127324730 -18264558 + MER5A DNA MER1_type 23 107 -82 522 252 24 0 chr10 127325922 127326049 -18263239 + Charlie1 DNA MER1_type 1 130 -2631 * 1337 166 35 42 chr10 127326046 127326359 -18262929 + Charlie1 DNA MER1_type 2449 2759 -2 189 264 0 0 chr10 127326777 127326830 -18262458 + MIR SINE MIR 201 253 -9 756 165 0 30 chr10 127327490 127327623 -18261665 - FLAM_A SINE Alu 0 133 5 305 237 52 52 chr10 127327740 127327875 -18261413 - MIR SINE MIR -11 251 117 186 71 0 0 chr10 127328408 127328436 -18260852 + (CAGCC)n Simple_repeat Simple_repeat 4 31 0 1029 126 0 0 chr10 127329027 127329170 -18260118 - AluSp/q SINE Alu -17 296 154 186 303 19 77 chr10 127330253 127330408 -18258880 + L2 LINE L2 3016 3161 -111 840 139 12 6 chr10 127330451 127330624 -18258664 + (TGGA)n Simple_repeat Simple_repeat 3 176 0 191 217 17 0 chr10 127330639 127330699 -18258589 + (TGGA)n Simple_repeat Simple_repeat 4 64 0 1371 181 0 56 chr10 127333253 127333541 -18255747 + AluJo SINE Alu 39 310 -2 1945 138 14 3 chr10 127336841 127337132 -18252156 - AluSx SINE Alu -18 294 1 2358 105 0 3 chr10 127337144 127337458 -18251830 - AluSq SINE Alu 0 313 1 2289 132 0 31 chr10 127339819 127340206 -18249082 + L1MB1 LINE L1 5794 6168 0 2436 85 0 3 chr10 127341370 127341677 -18247611 + AluY SINE Alu 2 307 -4 4279 200 86 76 chr10 127342088 127342688 -18246600 + L1ME2 LINE L1 3618 4210 -1954 578 143 10 0 chr10 127342688 127342786 -18246502 - L1MA4A LINE L1 -6 6297 6199 4279 200 86 76 chr10 127342786 127342818 -18246470 + L1ME2 LINE L1 4210 4240 -1924 603 154 8 16 chr10 127342818 127342941 -18246347 - L1MA7 LINE L1 0 6291 6170 4279 200 86 76 chr10 127342941 127344826 -18244462 + L1ME2 LINE L1 4240 6154 -10 189 0 0 0 chr10 127344830 127344851 -18244437 + (A)n Simple_repeat Simple_repeat 1 21 0 1838 169 0 10 chr10 127344851 127345165 -18244123 + AluJo SINE Alu 1 311 -1 357 314 134 17 chr10 127346369 127346541 -18242747 + MIR3 SINE MIR 17 208 0 258 206 48 16 chr10 127349608 127349671 -18239617 + MARNA DNA Mariner 118 182 -404 516 251 176 54 chr10 127349718 127350013 -18239275 - MARNA DNA Mariner -239 347 17 2119 119 0 3 chr10 127350739 127351025 -18238263 - AluSg SINE Alu -25 285 1 289 56 463 0 chr10 127352098 127352152 -18237136 - MADE1 DNA Mariner -1 79 1 2088 119 0 0 chr10 127354530 127354808 -18234480 - AluSx SINE Alu -34 278 1 28 0 0 0 chr10 127356242 127356270 -18233018 + AT_rich Low_complexity Low_complexity 1 28 0 180 0 0 0 chr10 127356580 127356600 -18232688 + (TC)n Simple_repeat Simple_repeat 1 20 0 208 284 22 104 chr10 127356655 127356789 -18232499 - MIR3 SINE MIR -71 137 15 287 267 199 31 chr10 127356916 127357077 -18232211 - MER5A DNA MER1_type -1 188 1 358 291 33 78 chr10 127357510 127357792 -18231496 + L1ME3A LINE L1 4887 5145 -1001 2419 94 0 0 chr10 127357792 127358091 -18231197 + AluSx SINE Alu 11 309 -3 358 291 33 78 chr10 127358091 127358234 -18231054 + L1ME3A LINE L1 5145 5293 -853 1114 258 70 10 chr10 127358240 127358627 -18230661 + Charlie2 DNA MER1_type 2451 2860 -2 641 248 28 21 chr10 127358656 127358909 -18230379 + L1ME3A LINE L1 5682 5939 -231 183 218 0 0 chr10 127358972 127359027 -18230261 + (TA)n Simple_repeat Simple_repeat 1 55 0 429 180 0 11 chr10 127359122 127359211 -18230077 - MER69 DNA AcHobo -3 2523 2436 * 2696 225 59 36 chr10 127359201 127359893 -18229395 - MER69 DNA AcHobo -518 708 1 243 170 0 0 chr10 127360078 127360125 -18229163 + (CAGAGA)n Simple_repeat Simple_repeat 2 48 0 477 248 0 0 chr10 127360923 127361052 -18228236 + (TG)n Simple_repeat Simple_repeat 1 129 0 213 264 302 0 chr10 127361130 127361259 -18228029 - MIR3 SINE MIR -7 201 34 589 268 118 22 chr10 127361283 127361511 -18227777 + MIR SINE MIR 13 262 0 3794 73 22 10 chr10 127363451 127363956 -18225332 + MER75 DNA T2_type 4 514 0 443 305 134 24 chr10 127364907 127365205 -18224083 - L2 LINE L2 -377 2937 2607 1542 162 24 26 chr10 127365280 127365610 -18223678 - MSTB LTR MaLR 0 426 1 299 255 43 130 chr10 127365855 127365936 -18223352 - MIR SINE MIR -14 248 162 384 59 0 0 chr10 127365936 127365987 -18223301 + (TCCA)n Simple_repeat Simple_repeat 1 51 0 299 255 43 130 chr10 127365987 127366113 -18223175 - MIR SINE MIR -100 162 59 2928 230 63 23 chr10 127366580 127367617 -18221671 + L1ME3A LINE L1 5054 6138 -32 419 253 49 6 chr10 127368047 127368206 -18221082 - MIR SINE MIR -44 164 34 210 158 70 53 chr10 127371267 127371324 -18217964 + L2 LINE L2 3256 3313 0 193 159 0 68 chr10 127371369 127371413 -18217875 - MIR SINE MIR -116 146 106 344 277 22 29 chr10 127372264 127372401 -18216887 + MER103 DNA DNA 22 157 -9 560 288 50 62 chr10 127372915 127373273 -18216015 - L1MC4a LINE L1 -1922 5886 5533 248 376 34 27 chr10 127373307 127373456 -18215832 + L2 LINE L2 3161 3310 -3 2167 139 37 3 chr10 127374416 127374768 -18214520 + THE1B LTR MaLR 1 364 0 425 107 146 58 chr10 127375615 127375718 -18213570 + L1MB8 LINE L1 6053 6164 -14 276 53 0 0 chr10 127378581 127378619 -18210669 + (CA)n Simple_repeat Simple_repeat 1 38 0 4421 103 0 2 chr10 127378717 127379331 -18209957 - L1PA13 LINE L1 -2 6161 5549 2477 52 3 0 chr10 127379704 127380014 -18209274 - AluY SINE Alu 0 311 1 348 331 28 35 chr10 127380551 127380693 -18208595 - MER5A DNA MER1_type -5 184 44 946 167 48 11 chr10 127380825 127381011 -18208277 + L1PB2 LINE L1 5958 6150 -1 549 219 23 47 chr10 127381100 127381228 -18208060 - L2 LINE L2 -6 3307 3183 2714 196 91 62 chr10 127382239 127383042 -18206246 + LTR1B LTR ERV1 1 826 0 208 335 119 55 chr10 127385231 127385616 -18203672 - L2 LINE L2 -15 3257 2848 2208 71 7 14 chr10 127386705 127386999 -18202289 + AluSp SINE Alu 1 292 -21 204 147 29 0 chr10 127389075 127389109 -18200179 - L2 LINE L2 -16 3297 3263 1953 139 123 5 chr10 127389225 127389606 -18199682 + MSTB LTR MaLR 1 426 0 327 104 0 0 chr10 127389614 127389662 -18199626 + (TTCC)n Simple_repeat Simple_repeat 4 51 0 364 350 81 25 chr10 127389830 127390267 -18199021 - L2 LINE L2 -227 3045 2579 192 351 81 9 chr10 127390391 127390502 -18198786 - L2 LINE L2 -1018 2296 2178 344 295 18 27 chr10 127392093 127392205 -18197083 - MIR SINE MIR -12 250 140 625 256 23 0 chr10 127392351 127392484 -18196804 - MIR SINE MIR -125 137 2 2266 92 0 19 chr10 127394536 127394853 -18194435 - AluY SINE Alu 0 311 1 218 288 0 0 chr10 127395004 127395077 -18194211 + G-rich Low_complexity Low_complexity 1 73 0 265 251 88 40 chr10 127396256 127396429 -18192859 - MIR SINE MIR -48 214 34 500 238 40 0 chr10 127398056 127398182 -18191106 + MIR3 SINE MIR 6 136 -72 784 265 69 53 chr10 127398329 127398706 -18190582 + LTR16A1 LTR ERVL 50 432 -25 24 53 0 0 chr10 127398881 127398919 -18190369 + AT_rich Low_complexity Low_complexity 1 38 0 198 0 0 0 chr10 127399479 127399501 -18189787 + (A)n Simple_repeat Simple_repeat 1 22 0 282 333 72 20 chr10 127400199 127400352 -18188936 + MIR3 SINE MIR 37 197 -11 328 318 98 62 chr10 127400838 127401143 -18188145 - L2 LINE L2 -14 3299 2984 1630 150 0 55 chr10 127401253 127401532 -18187756 + L1MB3 LINE L1 5875 6135 -48 1948 109 24 14 chr10 127401532 127401826 -18187462 + AluSx SINE Alu 1 297 -15 1630 150 0 55 chr10 127401826 127401873 -18187415 + L1MB3 LINE L1 6135 6183 0 799 159 8 0 chr10 127401884 127402016 -18187272 + FLAM_C SINE Alu 1 133 0 2229 95 0 0 chr10 127404657 127404961 -18184327 + AluSq SINE Alu 1 304 -9 21 36 0 0 chr10 127406058 127406086 -18183202 + AT_rich Low_complexity Low_complexity 1 28 0 1969 59 69 46 chr10 127406688 127406992 -18182296 + AluY SINE Alu 1 311 0 210 328 0 0 chr10 127407571 127407635 -18181653 + L2 LINE L2 3209 3272 0 1129 172 49 29 chr10 127407831 127408035 -18181253 - MER58A DNA MER1_type -16 208 1 2090 163 22 0 chr10 127408270 127408590 -18180698 - MER1B DNA MER1_type 0 339 13 320 336 98 0 chr10 127408739 127408861 -18180427 + MIR SINE MIR 40 173 -89 * 334 255 71 117 chr10 127408859 127409055 -18180233 - L2 LINE L2 -1 3312 3126 1953 129 0 3 chr10 127409118 127409405 -18179883 + AluSg SINE Alu 1 286 -24 578 66 20 62 chr10 127409405 127409676 -18179612 + (TA)n Simple_repeat Simple_repeat 1 259 0 380 172 91 169 chr10 127409688 127409927 -18179361 - MLT1C LTR MaLR -71 319 110 1979 195 0 14 chr10 127409937 127410286 -18179002 + MLT1A1 LTR MaLR 1 344 -21 335 260 48 0 chr10 127410292 127410427 -18178861 + (TATATG)n Simple_repeat Simple_repeat 1 141 0 391 152 163 11 chr10 127410437 127410529 -18178759 - MLT1C LTR MaLR -356 111 6 1753 244 53 7 chr10 127411620 127412051 -18177237 + MLT1C LTR MaLR 8 458 -9 326 225 46 179 chr10 127412270 127412510 -18176778 - L1MC4 LINE L1 -1 8041 7834 2211 173 51 29 chr10 127412565 127412768 -18176520 - L1ME2 LINE L1 -19 6145 5943 766 292 58 21 chr10 127412768 127413093 -18176195 - L1MB2 LINE L1 -233 5938 5602 251 276 0 118 chr10 127413165 127413292 -18175996 + MIR SINE MIR 37 148 -114 1462 218 23 25 chr10 127413332 127413686 -18175602 - MLT1A1 LTR MaLR -2 363 11 269 257 14 14 chr10 127413696 127413766 -18175522 + MIR SINE MIR 168 237 -25 575 303 75 49 chr10 127414894 127415161 -18174127 - L2 LINE L2 -5 3267 2994 1602 146 210 28 chr10 127415318 127415680 -18173608 - MSTA LTR MaLR 0 428 1 3378 181 18 26 chr10 127417014 127417667 -18171621 + L1MC3 LINE L1 6454 7101 -684 265 275 25 12 chr10 127417672 127417752 -18171536 + MLT1F1 LTR MaLR 45 125 -442 614 193 17 8 chr10 127417752 127417871 -18171417 + L1MC3 LINE L1 7190 7309 -476 593 181 105 8 chr10 127417871 127418004 -18171284 - MER7A DNA MER2_type -202 144 1 246 337 40 20 chr10 127418004 127418105 -18171183 + MIR SINE MIR 160 262 0 2001 128 3 0 chr10 127418128 127418426 -18170862 + AluSc SINE Alu 1 299 -10 432 0 0 0 chr10 127418745 127418793 -18170495 + (CA)n Simple_repeat Simple_repeat 1 48 0 2434 42 3 16 chr10 127419445 127419758 -18169530 - AluY SINE Alu -2 309 1 362 281 41 16 chr10 127419939 127420060 -18169228 - MIR3 SINE MIR -54 154 31 345 335 55 5 chr10 127420132 127420350 -18168938 + MER102b DNA MER1_type 104 332 -9 217 182 15 45 chr10 127420389 127420455 -18168833 + (TA)n Simple_repeat Simple_repeat 2 65 0 317 274 259 15 chr10 127420755 127420956 -18168332 + L2 LINE L2 2680 2929 -385 286 219 53 53 chr10 127421125 127421239 -18168049 + L2 LINE L2 3183 3296 -17 21 0 0 0 chr10 127423334 127423355 -18165933 + AT_rich Low_complexity Low_complexity 1 21 0 201 269 0 19 chr10 127424432 127424484 -18164804 + GA-rich Low_complexity Low_complexity 4 54 0 343 246 285 22 chr10 127424575 127424754 -18164534 + MIR SINE MIR 13 238 -24 449 281 33 0 chr10 127424773 127424894 -18164394 - MIR SINE MIR -57 205 81 2369 87 0 26 chr10 127425019 127425305 -18163983 + AluSq SINE Alu 1 280 -33 279 0 0 0 chr10 127425305 127425336 -18163952 + (CA)n Simple_repeat Simple_repeat 2 32 0 2369 87 0 26 chr10 127425336 127425358 -18163930 + AluSq SINE Alu 280 301 -12 863 224 132 8 chr10 127425398 127425648 -18163640 - L1ME3A LINE L1 -227 5943 5663 702 283 54 7 chr10 127425827 127426103 -18163185 + L1ME LINE L1 5532 5820 -301 188 244 179 0 chr10 127427091 127427169 -18162119 + L2 LINE L2 3151 3242 -30 485 236 0 0 chr10 127427213 127427319 -18161969 - MIR3 SINE MIR -46 162 57 21 0 0 0 chr10 127428914 127428935 -18160353 + AT_rich Low_complexity Low_complexity 1 21 0 258 307 62 51 chr10 127429974 127430150 -18159138 + MIR SINE MIR 20 197 -65 410 298 60 33 chr10 127430172 127430387 -18158901 + MIR SINE MIR 30 250 -12 382 294 114 44 chr10 127430427 127430655 -18158633 + MIR SINE MIR 19 262 0 364 211 44 11 chr10 127432683 127432773 -18156515 + MIR3 SINE MIR 95 187 -21 249 220 0 0 chr10 127432739 127432789 -18156499 + L3b LINE CR1 1533 1582 -1 * 227 374 12 0 chr10 127433487 127433570 -18155718 + MIR SINE MIR 40 123 -85 184 349 94 9 chr10 127433728 127433834 -18155454 + L2 LINE L2 3137 3251 -21 934 249 40 4 chr10 127433838 127434091 -18155197 - MIR SINE MIR 0 262 1 2077 138 0 0 chr10 127434204 127434494 -18154794 - AluSx SINE Alu -22 290 1 2071 131 0 7 chr10 127434949 127435268 -18154020 - AluSx SINE Alu 0 312 1 252 314 186 6 chr10 127435283 127435439 -18153849 + MIR SINE MIR 58 241 -21 870 180 196 75 chr10 127435557 127435863 -18153425 - MER2 DNA MER2_type 0 344 2 740 232 27 22 chr10 127436747 127436932 -18152356 + MLT1A1 LTR MaLR 172 357 -8 3734 155 31 6 chr10 127436936 127437608 -18151680 + L1MB8 LINE L1 5463 6151 -27 1078 175 23 92 chr10 127437834 127438024 -18151264 + MER33 DNA MER1_type 1 203 -2382 2306 105 0 0 chr10 127438024 127438329 -18150959 + AluSc SINE Alu 1 305 -4 1078 175 23 92 chr10 127438329 127438365 -18150923 + MER33 DNA MER1_type 203 240 -2345 2011 131 14 3 chr10 127438365 127438655 -18150633 - AluSx SINE Alu -19 293 1 1078 175 23 92 chr10 127438655 127438775 -18150513 + MER33 DNA MER1_type 240 324 0 3613 82 4 29 chr10 127439322 127439813 -18149475 - MER1A DNA MER1_type 0 529 51 274 348 0 35 chr10 127440142 127440257 -18149031 - MIR SINE MIR -151 111 1 2213 204 40 42 chr10 127441173 127441467 -18147821 + MLT1D LTR MaLR 1 295 -210 2380 94 0 3 chr10 127441467 127441776 -18147512 + AluSg1 SINE Alu 1 308 -1 2213 204 40 42 chr10 127441776 127441987 -18147301 + MLT1D LTR MaLR 295 505 0 426 316 87 5 chr10 127443009 127443205 -18146083 - MIR SINE MIR -43 219 8 231 61 0 0 chr10 127443476 127443509 -18145779 + (CA)n Simple_repeat Simple_repeat 2 34 0 220 322 140 28 chr10 127444028 127444171 -18145117 + MIR3 SINE MIR 41 199 -9 2150 121 0 3 chr10 127445804 127446101 -18143187 + AluSx SINE Alu 1 296 -16 2813 80 8 11 chr10 127447513 127447886 -18141402 + THE1C LTR MaLR 1 372 -3 1257 191 58 69 chr10 127448392 127448770 -18140518 + MLT1A2 LTR MaLR 1 374 0 437 272 185 8 chr10 127449862 127450105 -18139183 - L1MC4a LINE L1 -1790 6018 5733 484 257 15 7 chr10 127450117 127450253 -18139035 - MIR SINE MIR -123 139 3 23 0 0 0 chr10 127452445 127452468 -18136820 + AT_rich Low_complexity Low_complexity 1 23 0 431 265 136 12 chr10 127453633 127453795 -18135493 - MIR SINE MIR -74 188 7 2189 119 3 0 chr10 127455250 127455545 -18133743 - AluSx SINE Alu -16 296 1 499 151 0 0 chr10 127455639 127455725 -18133563 - L1MA9 LINE L1 -44 6268 6183 365 196 312 22 chr10 127456376 127456514 -18132774 + MER5B DNA MER1_type 1 178 0 39 0 0 0 chr10 127457065 127457104 -18132184 + AT_rich Low_complexity Low_complexity 1 39 0 351 73 49 49 chr10 127457105 127457228 -18132060 + (TTTAA)n Simple_repeat Simple_repeat 3 125 0 365 290 79 41 chr10 127457245 127457586 -18131702 + L1MEd LINE L1 848 1201 -4918 335 278 21 14 chr10 127457779 127457923 -18131365 + L1MEd LINE L1 1395 1539 -4590 5540 165 30 24 chr10 127457930 127458924 -18130364 + L1MC2 LINE L1 5233 6235 -109 2045 113 35 3 chr10 127458924 127459208 -18130080 + AluSq SINE Alu 3 295 -18 5540 165 30 24 chr10 127459208 127459310 -18129978 + L1MC2 LINE L1 6235 6335 -9 302 0 0 0 chr10 127459551 127459586 -18129702 + L1MB7 LINE L1 6141 6175 -9 632 308 151 42 chr10 127459829 127460688 -18128600 + L2 LINE L2 2338 3309 -4 192 277 170 36 chr10 127461400 127461512 -18127776 - MIR SINE MIR -50 212 86 194 343 19 38 chr10 127461930 127462035 -18127253 + L2 LINE L2 3121 3223 -49 276 273 126 66 chr10 127462148 127462331 -18126957 + MLT1K LTR MaLR 388 581 -7 420 284 131 57 chr10 127462480 127462846 -18126442 - L2 LINE L2 0 3313 2921 492 309 122 25 chr10 127463639 127464034 -18125254 + L2 LINE L2 2871 3303 -10 288 0 0 0 chr10 127464728 127464760 -18124528 + (T)n Simple_repeat Simple_repeat 1 32 0 308 347 134 0 chr10 127465559 127465715 -18123573 - MIR SINE MIR -65 143 16 2028 161 0 0 chr10 127466095 127466405 -18122883 + AluSx SINE Alu 1 310 -2 471 298 0 0 chr10 127466612 127466743 -18122545 + MIR SINE MIR 20 150 -112 2180 119 10 3 chr10 127466808 127467118 -18122170 + AluSq SINE Alu 1 312 -1 721 196 8 15 chr10 127467160 127467293 -18121995 + FLAM_C SINE Alu 1 132 -1 190 226 0 0 chr10 127468529 127468582 -18120706 + L2 LINE L2 3185 3237 -35 467 337 22 11 chr10 127468877 127469055 -18120233 - MIR SINE MIR -81 181 2 423 177 13 0 chr10 127470445 127470524 -18118764 + MER116 DNA Mariner 1 80 0 371 325 84 54 chr10 127470607 127471013 -18118275 + L2 LINE L2 2851 3268 -4 212 159 16 32 chr10 127471095 127471158 -18118130 + (TATAA)n Simple_repeat Simple_repeat 3 64 0 37 23 0 0 chr10 127471173 127471217 -18118071 + AT_rich Low_complexity Low_complexity 1 44 0 217 133 78 11 chr10 127471217 127471307 -18117981 + (TA)n Simple_repeat Simple_repeat 2 97 0 417 274 106 39 chr10 127471423 127471602 -18117686 + MIR SINE MIR 24 214 -48 380 301 24 8 chr10 127472516 127472639 -18116649 + MIR SINE MIR 20 144 -118 186 300 0 17 chr10 127474071 127474131 -18115157 + MIR3 SINE MIR 111 169 -39 334 65 0 0 chr10 127474553 127474599 -18114689 - MADE1 DNA Mariner -34 46 1 397 273 7 39 chr10 127474603 127474757 -18114531 - MIR3 SINE MIR -39 169 21 390 268 30 48 chr10 127475303 127475471 -18113817 + L1ME4a LINE L1 5938 6102 -19 247 291 100 27 chr10 127475617 127475837 -18113451 + L3b LINE CR1 1154 1389 -194 535 274 127 14 chr10 127476083 127476295 -18112993 - MIR SINE MIR -7 255 20 349 341 82 32 chr10 127476511 127476986 -18112302 - L2 LINE L2 -663 2651 2153 277 254 118 0 chr10 127477053 127477163 -18112125 + MIR3 SINE MIR 85 207 -1 235 288 45 0 chr10 127479681 127479747 -18109541 - MIR3 SINE MIR -39 169 101 1042 135 17 34 chr10 127479767 127479945 -18109343 + FRAM SINE Alu 1 173 -3 1860 114 10 38 chr10 127479954 127480268 -18109020 + AluSx SINE Alu 1 306 0 291 28 0 0 chr10 127480712 127480748 -18108540 + (CA)n Simple_repeat Simple_repeat 2 37 0 340 276 217 33 chr10 127480784 127480936 -18108352 - MER5A DNA MER1_type -1 188 9 549 307 57 5 chr10 127480963 127481175 -18108113 + MIR SINE MIR 34 256 -6 262 255 174 0 chr10 127481187 127481285 -18108003 + L2 LINE L2 3199 3313 0 26 74 0 0 chr10 127483913 127483967 -18105321 + GC_rich Low_complexity Low_complexity 1 54 0 354 23 0 0 chr10 127486414 127486457 -18102831 + (TC)n Simple_repeat Simple_repeat 1 43 0 261 57 0 0 chr10 127486456 127486491 -18102797 + (CA)n Simple_repeat Simple_repeat 1 35 0 * 2133 160 5 11 chr10 127488154 127488522 -18100766 + MER47A DNA MER2_type 1 366 0 1335 128 20 0 chr10 127488647 127488851 -18100437 - MER3 DNA MER1_type 0 209 2 291 54 0 0 chr10 127488980 127489017 -18100271 + (ATG)n Simple_repeat Simple_repeat 1 37 0 23 0 0 0 chr10 127489211 127489234 -18100054 + AT_rich Low_complexity Low_complexity 1 23 0 2303 119 0 6 chr10 127489261 127489572 -18099716 - AluSg SINE Alu -1 309 1 349 299 52 15 chr10 127490344 127490478 -18098810 + L2 LINE L2 3134 3272 0 180 0 0 0 chr10 127492686 127492706 -18096582 + (T)n Simple_repeat Simple_repeat 1 20 0 24 32 0 0 chr10 127492987 127493018 -18096270 + AT_rich Low_complexity Low_complexity 1 31 0 1895 139 0 0 chr10 127493021 127493279 -18096009 + AluSq SINE Alu 1 258 -55 318 240 55 55 chr10 127493306 127493489 -18095799 - MER112 DNA MER1_type -77 183 1 526 271 63 36 chr10 127493504 127493870 -18095418 + MLT1J LTR MaLR 64 475 -36 182 250 16 62 chr10 127493948 127494012 -18095276 - L2 LINE L2 -12 3301 3241 222 204 0 0 chr10 127494949 127494998 -18094290 + (CA)n Simple_repeat Simple_repeat 1 49 0 379 312 7 7 chr10 127495043 127495184 -18094104 - MIR SINE MIR -75 187 47 24 32 0 0 chr10 127495283 127495314 -18093974 + AT_rich Low_complexity Low_complexity 1 31 0 1780 185 52 0 chr10 127496245 127496570 -18092718 + MER68 LTR ERV1 208 549 -13 991 212 0 0 chr10 127496664 127496834 -18092454 + MER45A DNA AcHobo 5 174 -4 317 238 124 0 chr10 127497164 127497266 -18092022 - MER103 DNA DNA -9 157 43 2095 151 122 2 chr10 127497266 127497500 -18091788 - MLT1C LTR MaLR 0 467 262 459 0 0 0 chr10 127497500 127497551 -18091737 + (TG)n Simple_repeat Simple_repeat 2 52 0 2095 151 122 2 chr10 127497551 127497726 -18091562 - MLT1C LTR MaLR -205 262 9 437 260 71 0 chr10 127498793 127498920 -18090368 + L2 LINE L2 3137 3272 0 2089 108 0 24 chr10 127499040 127499365 -18089923 - AluSc SINE Alu 0 309 1 1507 124 33 0 chr10 127500325 127500535 -18088753 + AluSq SINE Alu 1 217 -96 609 274 56 78 chr10 127501281 127501551 -18087737 + Charlie8 DNA MER1_type 2 265 -2152 203 301 32 54 chr10 127501679 127501772 -18087516 - MIR SINE MIR 0 262 172 2583 42 0 10 chr10 127501863 127502171 -18087117 + AluY SINE Alu 1 305 -6 365 273 0 0 chr10 127502184 127502261 -18087027 - L2 LINE L2 -42 3230 3154 616 220 16 0 chr10 127502423 127502673 -18086615 + CT-rich Low_complexity Low_complexity 1 254 0 254 179 0 30 chr10 127502702 127502769 -18086519 + CT-rich Low_complexity Low_complexity 3 67 0 777 165 28 44 chr10 127502818 127503000 -18086288 - L1MB3 LINE L1 -7 6176 5998 984 114 160 0 chr10 127503228 127503403 -18085885 - L1MB3 LINE L1 -310 5873 5671 6711 84 0 49 chr10 127503436 127504352 -18084936 - L1PA10 LINE L1 -1 6167 5262 2192 118 3 0 chr10 127504352 127504649 -18084639 - AluY SINE Alu -13 298 1 6711 84 0 49 chr10 127504649 127504737 -18084551 - L1PA10 LINE L1 -906 5262 5171 207 294 0 0 chr10 127504739 127504807 -18084481 - MER5A DNA MER1_type -115 74 7 252 352 11 0 chr10 127504812 127504900 -18084388 - L2 LINE L2 -208 3064 2976 194 367 0 0 chr10 127505063 127505123 -18084165 - L2 LINE L2 -10 3262 3203 437 165 13 0 chr10 127507801 127507880 -18081408 + MER116 DNA Mariner 1 80 0 291 260 130 0 chr10 127508033 127508133 -18081155 - MIR SINE MIR -7 255 143 2208 118 0 13 chr10 127508181 127508359 -18080929 - AluSx SINE Alu -1 311 137 2447 77 0 0 chr10 127508359 127508670 -18080618 - AluY SINE Alu 0 311 1 2208 118 0 13 chr10 127508670 127508806 -18080482 - AluSx SINE Alu -175 137 1 241 290 87 0 chr10 127509033 127509102 -18080186 + MIR SINE MIR 4 78 -184 281 376 28 0 chr10 127509247 127509428 -18079860 + L2 LINE L2 2175 2360 -954 804 234 83 19 chr10 127511713 127511918 -18077370 - MLT1K LTR MaLR -2 586 369 233 0 0 59 chr10 127512216 127512250 -18077038 + (TCTCTG)n Simple_repeat Simple_repeat 2 33 0 235 314 121 8 chr10 127512262 127512386 -18076902 - MLT1K LTR MaLR -308 280 143 216 302 94 60 chr10 127512885 127512961 -18076327 - L2 LINE L2 -12 3260 3188 2430 84 0 0 chr10 127512961 127513257 -18076031 + AluSg SINE Alu 1 296 -14 216 302 94 60 chr10 127513257 127513329 -18075959 - L2 LINE L2 -84 3188 3107 240 258 113 10 chr10 127513447 127513544 -18075744 - L2 LINE L2 -223 3049 2943 2216 117 0 3 chr10 127514049 127514347 -18074941 + AluSx SINE Alu 1 297 -15 243 0 0 0 chr10 127514350 127514377 -18074911 + (CA)n Simple_repeat Simple_repeat 2 28 0 524 294 62 6 chr10 127514660 127514837 -18074451 + MIR SINE MIR 48 234 -28 5665 117 25 16 chr10 127514868 127514973 -18074315 - Tigger1 DNA MER2_type 0 2418 2315 2074 73 0 0 chr10 127514973 127515221 -18074067 + AluSx SINE Alu 52 299 -13 5665 117 25 16 chr10 127515221 127515989 -18073299 - Tigger1 DNA MER2_type -103 2315 1537 3293 45 2 0 chr10 127515997 127516396 -18072892 - L1PA5 LINE L1 0 6154 5755 4085 34 0 7 chr10 127516398 127517031 -18072257 + L1PA5 LINE L1 5101 5730 -424 9813 137 17 14 chr10 127517031 127518584 -18070704 - Tigger1 DNA MER2_type -859 1559 1 198 209 313 0 chr10 127520028 127520102 -18069186 + MIR SINE MIR 55 148 -66 628 220 47 0 chr10 127520333 127520483 -18068805 + MER103 DNA DNA 8 164 -2 1047 95 0 7 chr10 127521611 127521758 -18067530 - L1MA9 LINE L1 -619 5693 5548 3167 157 42 2 chr10 127521760 127522354 -18066934 + L1MA9 LINE L1 5695 6312 0 237 366 0 37 chr10 127522377 127522459 -18066829 + MIR3 SINE MIR 77 155 -53 290 205 86 99 chr10 127524097 127524237 -18065051 - MER5B DNA MER1_type -29 149 10 2106 199 32 28 chr10 127524237 127524740 -18064548 + MLT1D LTR MaLR 1 505 0 538 207 0 16 chr10 127526255 127526376 -18062912 - MER53 DNA DNA -70 119 1 276 286 13 0 chr10 127526572 127526649 -18062639 - L2 LINE L2 0 3272 3195 2194 188 95 2 chr10 127527406 127527868 -18061420 + MLT1D LTR MaLR 1 505 0 332 309 18 42 chr10 127528413 127528578 -18060710 - MIR3 SINE MIR -46 162 2 180 313 223 0 chr10 127528623 127528789 -18060499 + L2 LINE L2 2738 2940 -374 288 50 0 0 chr10 127528898 127528938 -18060350 + THE1C-int LTR MaLR 1541 1580 0 2446 123 8 11 chr10 127528938 127529312 -18059976 + THE1C LTR MaLR 1 373 -2 180 341 165 0 chr10 127529333 127529418 -18059870 + L2 LINE L2 3197 3295 -18 21 57 0 0 chr10 127530987 127531022 -18058266 + AT_rich Low_complexity Low_complexity 1 35 0 239 304 30 82 chr10 127531031 127531166 -18058122 + L2 LINE L2 3186 3313 0 242 130 0 37 chr10 127531549 127531603 -18057685 + (TATG)n Simple_repeat Simple_repeat 4 55 0 366 333 16 0 chr10 127531860 127531983 -18057305 + MIR3 SINE MIR 53 177 -31 1848 204 19 48 chr10 127532084 127532274 -18057014 + MLT1C LTR MaLR 2 196 -271 2460 70 0 0 chr10 127532274 127532573 -18056715 + AluY SINE Alu 1 299 -12 1848 204 19 48 chr10 127532573 127532862 -18056426 + MLT1C LTR MaLR 196 467 0 567 268 104 32 chr10 127533174 127533394 -18055894 + MIR SINE MIR 2 237 -25 1984 177 8 19 chr10 127533395 127533757 -18055531 + MLT1A1 LTR MaLR 2 359 -6 797 75 9 0 chr10 127533808 127533914 -18055374 - L1PA7 LINE L1 -4 6150 6044 335 382 23 68 chr10 127534078 127534387 -18054901 + L2 LINE L2 2969 3263 -9 257 100 25 0 chr10 127534964 127535004 -18054284 + L2 LINE L2 3269 3309 -4 367 364 171 0 chr10 127536031 127536218 -18053070 + MIR SINE MIR 18 236 -26 24 32 0 0 chr10 127536755 127536786 -18052502 + AT_rich Low_complexity Low_complexity 1 31 0 584 242 50 0 chr10 127538906 127539026 -18050262 + FLAM_A SINE Alu 1 126 -7 21 36 0 0 chr10 127539374 127539402 -18049886 + AT_rich Low_complexity Low_complexity 1 28 0 615 224 68 7 chr10 127539829 127539976 -18049312 - MIR SINE MIR -19 243 88 21 57 0 0 chr10 127541267 127541302 -18047986 + AT_rich Low_complexity Low_complexity 1 35 0 233 139 0 0 chr10 127541754 127541790 -18047498 - L2 LINE L2 -2 3270 3235 372 219 24 0 chr10 127541987 127542069 -18047219 + LTR37B LTR ERV1 12 95 -373 407 318 0 8 chr10 127542118 127542244 -18047044 + L2 LINE L2 2893 3017 -296 297 234 16 0 chr10 127542257 127542321 -18046967 + MER81 DNA DNA 50 114 0 5173 199 69 65 chr10 127542353 127543502 -18045786 + Charlie1a DNA MER1_type 7 1165 -1596 1659 188 0 25 chr10 127543502 127543816 -18045472 - AluJo SINE Alu -4 308 3 5173 199 69 65 chr10 127543816 127544108 -18045180 + Charlie1a DNA MER1_type 1165 1454 -1 844 242 117 12 chr10 127544114 127544362 -18044926 + L2 LINE L2 3040 3313 0 371 327 79 12 chr10 127545163 127545417 -18043871 - HAL1b LINE L1 -679 669 399 303 246 153 8 chr10 127547123 127547241 -18042047 - L1ME4a LINE L1 -12 6109 5975 669 248 63 22 chr10 127547338 127547608 -18041680 - L1ME4a LINE L1 -303 5818 5538 22 80 0 0 chr10 127547672 127547722 -18041566 + AT_rich Low_complexity Low_complexity 1 50 0 319 301 110 23 chr10 127548218 127548656 -18040632 - L1ME4a LINE L1 -1446 4700 4225 2154 114 0 3 chr10 127548662 127548959 -18040329 + AluSx SINE Alu 1 296 -16 231 73 115 31 chr10 127548979 127549075 -18040213 + (TTATA)n Simple_repeat Simple_repeat 5 108 0 407 298 0 16 chr10 127549088 127549209 -18040079 - L2 LINE L2 -414 2900 2782 2074 112 14 3 chr10 127549935 127550230 -18039058 - AluSq SINE Alu -15 298 1 415 327 0 18 chr10 127552020 127552133 -18037155 + MIR SINE MIR 35 145 -63 331 226 49 29 chr10 127552636 127552738 -18036550 - L3b LINE CR1 -188 1395 1292 22 0 0 0 chr10 127554489 127554511 -18034777 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr10 127554735 127554759 -18034529 + AT_rich Low_complexity Low_complexity 1 24 0 307 282 99 0 chr10 127555186 127555257 -18034031 - L2 LINE L2 -2 3311 3234 2017 146 108 45 chr10 127555420 127555817 -18033471 + MSTA LTR MaLR 7 428 0 258 303 79 79 chr10 127556010 127556188 -18033100 - MLT1-int LTR MaLR -171 1200 1023 34 0 0 0 chr10 127556295 127556329 -18032959 + AT_rich Low_complexity Low_complexity 1 34 0 346 403 11 0 chr10 127556384 127556570 -18032718 - MLT1-int LTR MaLR -485 886 699 236 265 127 18 chr10 127556808 127556974 -18032314 + L1ME2 LINE L1 2337 2520 -4020 4465 128 61 31 chr10 127556979 127557795 -18031493 - Tigger3(Golem) DNA MER2_type -1 3028 2188 2364 219 93 20 chr10 127557797 127558828 -18030460 + L1ME2 LINE L1 5044 6242 -316 2065 73 4 0 chr10 127558828 127559089 -18030199 + AluSg SINE Alu 38 299 -11 2364 219 93 20 chr10 127559089 127559429 -18029859 + L1ME2 LINE L1 6242 6556 -2 267 305 32 11 chr10 127559741 127559836 -18029452 - L2 LINE L2 -199 3073 2977 * 297 273 269 34 chr10 127559831 127560248 -18029040 - L2 LINE L2 -993 2321 1807 186 167 0 0 chr10 127560349 127560385 -18028903 + GA-rich Low_complexity Low_complexity 2 37 0 277 342 98 5 chr10 127560392 127560576 -18028712 + L1M4 LINE L1 4025 4225 -1921 23 0 0 0 chr10 127560684 127560707 -18028581 + AT_rich Low_complexity Low_complexity 1 23 0 232 232 0 0 chr10 127560743 127560799 -18028489 - L1M4 LINE L1 -2367 3779 3724 182 342 141 0 chr10 127561487 127561636 -18027652 + L2 LINE L2 2803 2972 -342 3533 121 21 8 chr10 127561657 127562176 -18027112 + MER1A DNA MER1_type 4 529 0 367 324 67 42 chr10 127562179 127562417 -18026871 + L2 LINE L2 2988 3231 -82 1572 277 128 30 chr10 127562448 127563266 -18026022 - L2 LINE L2 -1 3312 2419 349 340 48 48 chr10 127564220 127564367 -18024921 - L2 LINE L2 -5 3267 3121 1221 306 33 20 chr10 127564419 127564909 -18024379 + L1MEc LINE L1 73 568 -5828 1726 227 26 19 chr10 127564913 127565689 -18023599 + L1MEc LINE L1 596 4349 -1866 2392 74 0 0 chr10 127565689 127565987 -18023301 + AluY SINE Alu 1 298 -13 1883 149 80 5 chr10 127565992 127566380 -18022908 + L1MB7 LINE L1 4958 5374 -772 630 100 150 8 chr10 127566398 127566518 -18022770 + Tigger3(Golem) DNA MER2_type 2245 2381 -648 3596 174 62 13 chr10 127566541 127566813 -18022475 + L1MB7 LINE L1 5376 5633 -551 5666 122 101 62 chr10 127566813 127567219 -18022069 + Tigger3b DNA MER2_type 1 390 -2638 2089 95 3 24 chr10 127567219 127567513 -18021775 + AluSx SINE Alu 1 288 -24 5666 122 101 62 chr10 127567513 127568291 -18020997 + Tigger3b DNA MER2_type 390 1231 0 3596 174 62 13 chr10 127568291 127568780 -18020508 + L1MB7 LINE L1 5633 6174 -10 2190 101 7 0 chr10 127568828 127569134 -18020154 + AluSg SINE Alu 1 308 -2 267 103 0 0 chr10 127569152 127569191 -18020097 + (GGAA)n Simple_repeat Simple_repeat 2 40 0 279 240 83 55 chr10 127569193 127569410 -18019878 + L1MEc LINE L1 1054 1276 -5120 1405 134 15 11 chr10 127569885 127570146 -18019142 - L1 LINE L1 -1499 4647 4386 423 191 0 0 chr10 127673460 127673528 -17915760 - AluS SINE Alu -244 69 2 2165 104 0 0 chr10 127673529 127673827 -17915461 - AluSx SINE Alu -14 298 1 285 302 176 19 chr10 127673962 127674121 -17915167 - MIR SINE MIR -71 191 8 194 340 0 0 chr10 127674336 127674409 -17914879 - MIR SINE MIR -62 146 81 896 93 37 6 chr10 127674724 127674885 -17914403 + CT-rich Low_complexity Low_complexity 3 168 0 1986 137 7 0 chr10 127674885 127675162 -17914126 - AluSx SINE Alu -33 279 1 550 173 33 21 chr10 127675165 127675288 -17914000 - L1MD3 LINE L1 -1 8041 7871 328 203 0 0 chr10 127676443 127676502 -17912786 - L2 LINE L2 -1 3312 3254 891 192 148 25 chr10 127676636 127676839 -17912449 + MIR SINE MIR 20 247 -15 246 218 154 91 chr10 127676951 127677061 -17912227 + MIR SINE MIR 106 222 -40 2071 97 14 17 chr10 127677174 127677463 -17911825 + AluSq SINE Alu 1 288 -25 2388 77 0 43 chr10 127677475 127677800 -17911488 + AluY SINE Alu 1 311 0 2313 95 13 7 chr10 127678295 127678600 -17910688 + AluSg SINE Alu 1 307 -3 533 247 76 13 chr10 127678928 127679086 -17910202 + MIR SINE MIR 80 247 -15 192 250 71 18 chr10 127679603 127679659 -17909629 + L2 LINE L2 3136 3194 -78 566 175 0 8 chr10 127679662 127679782 -17909506 + CT-rich Low_complexity Low_complexity 3 121 0 912 98 8 0 chr10 127679821 127679943 -17909345 - AluJb SINE Alu -189 123 1 233 224 86 17 chr10 127679992 127680050 -17909238 + MER91A DNA MER1_type 124 185 -11 535 264 52 0 chr10 127680189 127680344 -17908944 + MER103 DNA DNA 1 163 -3 22 0 0 0 chr10 127681015 127681037 -17908251 + AT_rich Low_complexity Low_complexity 1 22 0 389 347 137 18 chr10 127681378 127681597 -17907691 + L2 LINE L2 3005 3249 -23 2110 107 36 0 chr10 127682355 127682636 -17906652 - AluSq SINE Alu -22 291 1 234 0 0 0 chr10 127683051 127683077 -17906211 + (T)n Simple_repeat Simple_repeat 1 26 0 2263 82 0 0 chr10 127683707 127683986 -17905302 + AluSg SINE Alu 21 299 -11 2132 117 56 39 chr10 127684378 127684736 -17904552 - THE1B LTR MaLR 0 364 1 246 236 11 0 chr10 127685298 127685358 -17903930 - MIR SINE MIR -112 150 91 288 233 0 0 chr10 127685841 127685914 -17903374 - MER116 DNA Mariner 0 80 8 518 255 67 17 chr10 127686043 127686219 -17903069 - LTR35 LTR ERV1 -1 670 492 1988 152 3 3 chr10 127686219 127686522 -17902766 + AluSx SINE Alu 1 303 -9 518 255 67 17 chr10 127686522 127686550 -17902738 - LTR35 LTR ERV1 -179 492 467 2676 86 3 0 chr10 127686651 127687011 -17902277 + L1PA13 LINE L1 5803 6163 0 295 185 19 0 chr10 127687018 127687072 -17902216 - LTR58 LTR ERV1 -275 404 350 695 233 26 62 chr10 127687331 127687450 -17901838 - MER5A DNA MER1_type -3 186 75 2528 82 0 0 chr10 127687450 127687756 -17901532 - AluSq SINE Alu -7 306 1 695 233 26 62 chr10 127687756 127687829 -17901459 - MER5A DNA MER1_type -114 75 1 1945 148 7 0 chr10 127688190 127688501 -17900787 + AluSq SINE Alu 1 313 0 2206 181 87 103 chr10 127688706 127688800 -17900488 + MER72 LTR ERV1 1 95 -627 2175 74 3 74 chr10 127688800 127689125 -17900163 + AluSp SINE Alu 1 302 -11 2206 181 87 103 chr10 127689125 127689694 -17899594 + MER72 LTR ERV1 95 653 -69 2167 94 14 3 chr10 127689694 127689982 -17899306 - AluSc SINE Alu -18 291 1 2206 181 87 103 chr10 127689982 127690051 -17899237 + MER72 LTR ERV1 653 722 0 2160 71 6 90 chr10 127690169 127690491 -17898797 - AluSq SINE Alu -16 297 3 195 246 0 18 chr10 127690495 127690552 -17898736 - MER5B DNA MER1_type -116 62 7 216 88 0 29 chr10 127690496 127690530 -17898758 + MER5A DNA MER1_type 129 161 -28 312 291 29 74 chr10 127690566 127690741 -17898547 + MER5A DNA MER1_type 23 189 0 338 324 52 48 chr10 127690838 127691088 -17898200 - L2 LINE L2 -1 3312 3062 915 172 58 6 chr10 127691099 127691273 -17898015 + MER5A DNA MER1_type 7 189 0 207 311 158 10 chr10 127691273 127691467 -17897821 - L2 LINE L2 -249 3064 2842 368 259 39 134 chr10 127691543 127691639 -17897649 - L2 LINE L2 -645 2669 2565 797 193 37 66 chr10 127691639 127691882 -17897406 - MER106A DNA MER1_type 0 236 1 368 259 39 134 chr10 127691882 127692000 -17897288 - L2 LINE L2 -749 2565 2437 2344 88 14 3 chr10 127692000 127692294 -17896994 + AluSx SINE Alu 1 297 -15 2097 65 94 7 chr10 127692297 127692574 -17896714 + AluY SINE Alu 1 301 -10 368 259 39 134 chr10 127692574 127692659 -17896629 - L2 LINE L2 -879 2435 2394 222 290 65 78 chr10 127692998 127693215 -17896073 - L2 LINE L2 -115 3157 2944 2449 46 10 10 chr10 127693292 127693595 -17895693 - AluY SINE Alu -6 305 3 2031 102 11 32 chr10 127693595 127693877 -17895411 - AluSp SINE Alu -35 278 1 448 250 0 33 chr10 127694201 127694321 -17894967 - MIR SINE MIR -130 132 17 306 302 47 7 chr10 127694828 127694977 -17894311 - L1ME4a LINE L1 -3 6118 5964 34 55 0 0 chr10 127695041 127695096 -17894192 + AT_rich Low_complexity Low_complexity 1 55 0 252 0 0 0 chr10 127695096 127695124 -17894164 + (CA)n Simple_repeat Simple_repeat 2 29 0 185 0 0 39 chr10 127695135 127695146 -17894142 + (TG)n Simple_repeat Simple_repeat 2 12 -14 2352 104 0 0 chr10 127695146 127695443 -17893845 + AluSx SINE Alu 1 297 -15 185 0 0 39 chr10 127695443 127695457 -17893831 + (TG)n Simple_repeat Simple_repeat 12 26 0 1817 164 60 21 chr10 127695484 127695680 -17893608 - L1MC2 LINE L1 -2 6342 6155 935 223 35 0 chr10 127695680 127695882 -17893406 - MER6B DNA MER2_type 0 210 2 1817 164 60 21 chr10 127695882 127696070 -17893218 - L1MC2 LINE L1 -189 6155 5943 858 193 0 0 chr10 127696154 127696330 -17892958 - L1ME3 LINE L1 -108 6054 5879 609 128 20 0 chr10 127696360 127696462 -17892826 - L1MB2 LINE L1 -1 6170 6067 4947 224 81 46 chr10 127696472 127697367 -17891921 - L1MEc LINE L1 -3065 3150 2287 2088 123 0 45 chr10 127697367 127697540 -17891748 - AluSx SINE Alu -16 296 142 2230 110 14 0 chr10 127697540 127697832 -17891456 - AluSg SINE Alu -14 296 1 2088 123 0 45 chr10 127697832 127697968 -17891320 - AluSx SINE Alu -170 142 1 4947 224 81 46 chr10 127697968 127698773 -17890515 - L1MEc LINE L1 -3928 2287 1511 2318 90 7 0 chr10 127698773 127699063 -17890225 - AluSx SINE Alu -12 300 9 4947 224 81 46 chr10 127699063 127699937 -17889351 - L1MEc LINE L1 -4704 1511 409 1649 122 21 107 chr10 127699937 127700264 -17889024 - AluYb8 SINE Alu -19 299 1 4947 224 81 46 chr10 127700264 127700491 -17888797 - L1MEc LINE L1 -5806 409 191 2470 87 0 3 chr10 127700499 127700809 -17888479 - AluY SINE Alu -2 309 1 1616 202 3 43 chr10 127701594 127701740 -17887548 + AluJb SINE Alu 1 151 -161 2453 82 7 0 chr10 127701740 127702044 -17887244 + AluSp SINE Alu 1 306 -7 1616 202 3 43 chr10 127702044 127702219 -17887069 + AluJb SINE Alu 151 309 -3 2241 96 0 45 chr10 127702860 127703173 -17886115 + AluSx SINE Alu 1 299 -13 2086 87 84 0 chr10 127703248 127703523 -17885765 - AluY SINE Alu -13 298 1 2226 88 27 0 chr10 127704102 127704396 -17884892 + AluY SINE Alu 1 302 -9 243 0 0 0 chr10 127704396 127704423 -17884865 + (TA)n Simple_repeat Simple_repeat 2 28 0 549 257 36 0 chr10 127704892 127705032 -17884256 - MER103 DNA DNA -12 154 10 2315 106 0 3 chr10 127705045 127705348 -17883940 - AluY SINE Alu -8 303 2 2340 97 7 0 chr10 127705351 127705649 -17883639 - AluSq SINE Alu -13 300 1 340 181 0 0 chr10 127706385 127706457 -17882831 + LTR30 LTR ERV1 552 623 -99 246 62 0 0 chr10 127706459 127706491 -17882797 + (GAAA)n Simple_repeat Simple_repeat 2 33 0 1863 157 83 35 chr10 127707000 127707069 -17882219 - MSTC LTR MaLR -3 425 361 2059 110 27 30 chr10 127707069 127707369 -17881919 - AluSx SINE Alu -12 300 2 1863 157 83 35 chr10 127707369 127707709 -17881579 - MSTC LTR MaLR -67 361 1 391 94 31 16 chr10 127707991 127708055 -17881233 + MIR3 SINE MIR 98 162 -46 2304 121 0 0 chr10 127708103 127708408 -17880880 + AluSx SINE Alu 1 305 -7 245 267 217 33 chr10 127708531 127708651 -17880637 - L2 LINE L2 -3 3310 3169 2492 65 3 0 chr10 127808775 127809081 -17780207 + AluY SINE Alu 1 307 -4 245 333 135 0 chr10 127809092 127809203 -17780085 - MIR3 SINE MIR -28 180 55 2343 90 0 10 chr10 127809635 127809936 -17779352 - AluSg SINE Alu -12 298 1 808 218 127 5 chr10 127811133 127811353 -17777935 - MER58 DNA MER1_type -57 284 38 699 335 40 0 chr10 127811393 127811641 -17777647 + MIR SINE MIR 5 262 0 28 29 0 0 chr10 127811840 127811875 -17777413 + AT_rich Low_complexity Low_complexity 1 35 0 197 232 29 72 chr10 127812857 127812926 -17776362 - L2 LINE L2 -84 3229 3164 334 167 42 54 chr10 127813176 127813344 -17775944 + (TTATA)n Simple_repeat Simple_repeat 3 168 0 29 28 0 0 chr10 127813557 127813593 -17775695 + AT_rich Low_complexity Low_complexity 1 36 0 3294 155 8 2 chr10 127813996 127814520 -17774768 + MER1A DNA MER1_type 1 527 0 25 75 0 0 chr10 127814733 127814786 -17774502 + AT_rich Low_complexity Low_complexity 1 53 0 210 345 73 41 chr10 127815192 127815534 -17773754 - L2 LINE L2 -703 2611 2259 292 299 94 8 chr10 127815759 127815876 -17773412 - L2 LINE L2 -5 3267 3141 204 40 0 0 chr10 127816491 127816516 -17772772 + (TG)n Simple_repeat Simple_repeat 2 26 0 201 214 41 20 chr10 127816521 127816619 -17772669 + (TA)n Simple_repeat Simple_repeat 1 100 0 2243 66 0 0 chr10 127816830 127817104 -17772184 - AluY SINE Alu -1 310 37 627 292 38 22 chr10 127817924 127818109 -17771179 - MIR SINE MIR -25 237 50 647 147 159 0 chr10 127818128 127818291 -17770997 + MER53 DNA DNA 1 189 0 327 313 151 57 chr10 127819645 127819910 -17769378 + L2 LINE L2 2982 3271 -1 244 303 79 18 chr10 127820567 127820588 -17768700 + MLT1J2 LTR MaLR 1 19 -431 2365 87 0 0 chr10 127820588 127820887 -17768401 - AluY SINE Alu -11 300 2 244 303 79 18 chr10 127820887 127821030 -17768258 + MLT1J2 LTR MaLR 19 175 -275 25 95 0 0 chr10 127821130 127821204 -17768084 + AT_rich Low_complexity Low_complexity 1 74 0 1650 145 161 34 chr10 127821388 127821768 -17767520 + MSTA LTR MaLR 1 428 0 285 221 47 35 chr10 127822108 127822194 -17767094 - FLAM SINE Alu -6 127 56 419 145 0 0 chr10 127822459 127822521 -17766767 - FRAM/FAM SINE Alu -115 61 1 185 375 23 23 chr10 127822532 127822620 -17766668 + MIR3 SINE MIR 112 199 -9 211 330 140 0 chr10 127823097 127823197 -17766091 + L3 LINE CR1 1298 1411 -166 472 294 52 46 chr10 127823372 127823525 -17765763 + L3 LINE CR1 1423 1576 -1 21 0 0 0 chr10 127824278 127824299 -17764989 + AT_rich Low_complexity Low_complexity 1 21 0 1289 265 92 48 chr10 127825106 127825219 -17764069 - Charlie8 DNA MER1_type 0 2417 2310 1410 148 21 4 chr10 127825219 127825456 -17763832 + L1PB3 LINE L1 5907 6147 -7 1289 265 92 48 chr10 127825456 127826092 -17763196 - Charlie8 DNA MER1_type -107 2310 1635 1969 118 104 20 chr10 127826092 127826438 -17762850 - THE1C LTR MaLR 0 375 1 2550 246 96 15 chr10 127826449 127827378 -17761910 - Charlie8 DNA MER1_type -829 1588 585 425 234 229 19 chr10 127831035 127831249 -17758039 + L2 LINE L2 3054 3312 -1 6135 78 2 26 chr10 127831460 127833039 -17756249 - L1PA13 LINE L1 -2 6161 4563 2011 138 3 0 chr10 127833069 127833380 -17755908 + AluSx SINE Alu 1 312 0 302 109 0 0 chr10 127833545 127833591 -17755697 - L1PA13 LINE L1 -1586 4560 4515 209 326 45 11 chr10 127833808 127833897 -17755391 - MER91A DNA MER1_type -104 92 1 2388 61 3 0 chr10 127835989 127836282 -17753006 + AluY SINE Alu 1 294 -17 867 329 170 19 chr10 127836316 127837425 -17751863 + L2 LINE L2 1985 3264 -8 25 0 0 0 chr10 127837677 127837702 -17751586 + AT_rich Low_complexity Low_complexity 1 25 0 361 332 54 1 chr10 127837792 127838024 -17751264 + L1ME3 LINE L1 5296 5497 -665 2067 147 47 10 chr10 127838073 127838481 -17750807 - MER95 LTR ERV 0 431 9 386 316 73 55 chr10 127838489 127838644 -17750644 + L1ME3 LINE L1 5552 5703 -459 2588 58 0 0 chr10 127838644 127838953 -17750335 - AluY SINE Alu -2 309 1 386 316 73 55 chr10 127838953 127839149 -17750139 + L1ME3 LINE L1 5703 5928 -234 189 0 0 0 chr10 127839371 127839392 -17749896 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 852 208 7 0 chr10 127839395 127839544 -17749744 - FAM SINE Alu -28 157 8 32 0 0 0 chr10 127840183 127840215 -17749073 + AT_rich Low_complexity Low_complexity 1 32 0 1472 218 126 153 chr10 127841028 127841228 -17748060 + MER52A LTR ERV1 660 864 -891 207 0 0 0 chr10 127841228 127841251 -17748037 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2302 66 14 0 chr10 127841253 127841539 -17747749 - AluY SINE Alu -21 290 1 1472 218 126 153 chr10 127841539 127842442 -17746846 + MER52A LTR ERV1 865 1736 -19 817 104 0 83 chr10 127842800 127842944 -17746344 - FLAM_C SINE Alu -1 132 1 342 255 91 123 chr10 127843101 127843630 -17745658 + MLT1H LTR MaLR 38 549 0 33 0 0 0 chr10 127844461 127844494 -17744794 + AT_rich Low_complexity Low_complexity 1 33 0 796 280 71 41 chr10 127844662 127845114 -17744174 + L2 LINE L2 2679 3144 -169 459 274 114 66 chr10 127845421 127845966 -17743322 - L2 LINE L2 -3 3310 2720 2114 167 3 3 chr10 127846016 127846376 -17742912 + MLT1A1 LTR MaLR 3 362 -3 1350 196 57 21 chr10 127847935 127848266 -17741022 + MER2 DNA MER2_type 2 344 0 2572 58 0 0 chr10 127848321 127848630 -17740658 + AluY SINE Alu 1 309 -2 2525 149 91 4 chr10 127848630 127849126 -17740162 + Tigger1 DNA MER2_type 1880 2418 0 1608 144 72 41 chr10 127849170 127849461 -17739827 + AluJo SINE Alu 1 300 -12 853 264 31 25 chr10 127850165 127850483 -17738805 + L1ME3 LINE L1 5596 5915 -247 238 196 39 0 chr10 127850617 127850668 -17738620 + MIR SINE MIR 124 176 -86 659 231 34 19 chr10 127850740 127850948 -17738340 + L1ME3 LINE L1 5927 6137 -25 25 31 0 0 chr10 127850956 127850988 -17738300 + AT_rich Low_complexity Low_complexity 1 32 0 305 225 50 42 chr10 127851207 127851227 -17738061 - L1MA10 LINE L1 -2 6332 6313 1104 263 53 15 chr10 127851227 127851626 -17737662 - L1ME1 LINE L1 -15 6151 5738 378 234 40 81 chr10 127851860 127851984 -17737304 + MIR3 SINE MIR 61 179 -29 23 0 0 0 chr10 127851985 127852008 -17737280 + AT_rich Low_complexity Low_complexity 1 23 0 465 259 26 0 chr10 127854542 127854658 -17734630 - MIR SINE MIR -37 225 107 2102 52 45 0 chr10 127854735 127855045 -17734243 + AluY SINE Alu 1 322 0 2018 122 0 20 chr10 127855909 127856213 -17733075 - AluSx SINE Alu -14 298 1 340 255 216 39 chr10 127856265 127856418 -17732870 - MER5A DNA MER1_type 0 189 10 441 54 0 0 chr10 127857016 127857072 -17732216 + (TG)n Simple_repeat Simple_repeat 1 56 0 378 0 0 0 chr10 127857073 127857115 -17732173 + (TA)n Simple_repeat Simple_repeat 2 43 0 2069 120 55 33 chr10 127857187 127857553 -17731735 - THE1C LTR MaLR -1 374 1 25 0 0 0 chr10 127857616 127857641 -17731647 + AT_rich Low_complexity Low_complexity 1 25 0 448 278 85 52 chr10 127858393 127858605 -17730683 - L2 LINE L2 0 3313 3095 2360 91 0 0 chr10 127859335 127859643 -17729645 + AluY SINE Alu 1 308 -3 2642 263 75 41 chr10 127859886 127860924 -17728364 + L1M4c LINE L1 413 1486 -4812 1877 125 6 78 chr10 127860924 127861244 -17728044 + AluSx SINE Alu 1 297 -15 454 167 29 0 chr10 127861252 127861354 -17727934 + GA-rich Low_complexity Low_complexity 1 105 0 4306 230 23 30 chr10 127861408 127861835 -17727453 + L1M4c LINE L1 1936 2365 -4017 1666 183 6 38 chr10 127861835 127861961 -17727327 + AluJo SINE Alu 1 129 -183 369 0 0 0 chr10 127861961 127862002 -17727286 + (TTTTG)n Simple_repeat Simple_repeat 2 42 0 2223 129 0 0 chr10 127862004 127862307 -17726981 + AluSx SINE Alu 1 303 -9 1666 183 6 38 chr10 127862307 127862494 -17726794 + AluJo SINE Alu 130 307 -5 4306 230 23 30 chr10 127862494 127863465 -17725823 + L1M4c LINE L1 2365 3319 -3063 1140 117 137 15 chr10 127863465 127863670 -17725618 - MER30 DNA MER1_type 0 230 1 4306 230 23 30 chr10 127863670 127864050 -17725238 + L1M4c LINE L1 3319 3700 -2682 2694 210 35 18 chr10 127864053 127864704 -17724584 + L1 LINE L1 4719 5380 -1002 2459 156 39 2 chr10 127864705 127865115 -17724173 + MSTB LTR MaLR 2 426 0 8962 176 18 9 chr10 127865118 127866753 -17722535 + MSTB-int LTR MaLR 2 1651 0 1716 171 36 0 chr10 127866753 127867062 -17722226 + MSTB LTR MaLR 1 320 -106 2303 83 6 0 chr10 127867062 127867389 -17721899 - L1PA8 LINE L1 -21 6151 5823 * 2201 93 3 20 chr10 127867389 127867689 -17721599 - AluSg SINE Alu -14 296 2 4013 155 83 9 chr10 127867689 127868523 -17720765 - L1MA7 LINE L1 -117 6174 5276 1802 150 34 0 chr10 127869421 127869748 -17719540 + L1MA4 LINE L1 5952 6289 -11 23 0 0 0 chr10 127871439 127871462 -17717826 + AT_rich Low_complexity Low_complexity 1 23 0 533 375 57 19 chr10 127872080 127872550 -17716738 + L2 LINE L2 1710 2197 -1117 21 0 0 0 chr10 127872552 127872573 -17716715 + AT_rich Low_complexity Low_complexity 1 21 0 411 338 89 49 chr10 127872676 127873040 -17716248 + L2 LINE L2 2641 3036 -236 2145 123 0 0 chr10 127873040 127873342 -17715946 - AluSg SINE Alu -8 302 1 411 338 89 49 chr10 127873342 127873589 -17715699 + L2 LINE L2 3036 3272 0 356 243 47 9 chr10 127873672 127873779 -17715509 + MIR SINE MIR 28 138 -70 23 0 0 0 chr10 127873891 127873914 -17715374 + AT_rich Low_complexity Low_complexity 1 23 0 1939 65 12 8 chr10 127874227 127874474 -17714814 + AluSc SINE Alu 53 300 -9 445 301 138 21 chr10 127874478 127874717 -17714571 + MLT1J2 LTR MaLR 182 448 -2 281 224 52 0 chr10 127875954 127876012 -17713276 - MIR SINE MIR -140 122 62 208 381 44 0 chr10 127876322 127876482 -17712806 + L2 LINE L2 2595 2761 -553 291 167 67 0 chr10 127876524 127876614 -17712674 - MER3 DNA MER1_type 0 2566 2471 324 247 0 0 chr10 127876620 127876697 -17712591 - MER3 DNA MER1_type -92 117 41 692 320 32 13 chr10 127877232 127877607 -17711681 + L1MEc LINE L1 36 417 -5979 308 347 72 26 chr10 127877709 127877902 -17711386 + L1MEc LINE L1 499 700 -5696 357 261 205 42 chr10 127877907 127878581 -17710707 + L1MEc LINE L1 774 1565 -4831 2598 182 76 65 chr10 127878581 127879278 -17710010 - MER44D DNA MER2_type 0 705 1 357 261 205 42 chr10 127879278 127879296 -17709992 + L1MEc LINE L1 1565 1579 -4817 511 206 55 6 chr10 127879296 127879461 -17709827 + L1ME1 LINE L1 5000 5172 -974 501 107 13 0 chr10 127879461 127879536 -17709752 - U6 snRNA snRNA -31 76 1 367 224 31 68 chr10 127879537 127879698 -17709590 + L1ME1 LINE L1 5159 5313 -833 2180 139 0 0 chr10 127879722 127880031 -17709257 + AluSc SINE Alu 1 309 0 183 80 0 0 chr10 127880031 127880056 -17709232 + (GA)n Simple_repeat Simple_repeat 2 26 0 1097 223 117 25 chr10 127880056 127880459 -17708829 + L1ME1 LINE L1 5317 5756 -408 1516 230 3 26 chr10 127880481 127880833 -17708455 + Tigger7 DNA MER2_type 1 344 -2143 2976 168 9 0 chr10 127880856 127881428 -17707860 + L1PA15 LINE L1 3884 4460 -1686 5995 90 19 11 chr10 127881429 127883019 -17706269 + L1PA15 LINE L1 4529 6157 -8 2173 129 17 0 chr10 127883044 127883394 -17705894 + L1PA16 LINE L1 5806 6161 -5 760 256 9 22 chr10 127883401 127883628 -17705660 + L1ME1 LINE L1 5780 6003 -163 1182 94 0 0 chr10 127883637 127883796 -17705492 + AluSg/x SINE Alu 154 312 0 2456 49 0 46 chr10 127883800 127884125 -17705163 + AluY SINE Alu 2 311 0 1256 242 152 19 chr10 127884128 127884595 -17704693 - L2 LINE L2 -808 2506 1978 315 250 0 12 chr10 127885325 127885409 -17703879 + MER21B LTR ERV1 408 490 -373 2414 96 0 0 chr10 127885857 127886160 -17703128 - AluY SINE Alu -8 303 1 1036 269 79 13 chr10 127886472 127886960 -17702328 + MLT1H LTR MaLR 6 549 0 377 333 0 16 chr10 127887004 127887127 -17702161 + L2 LINE L2 3193 3313 0 182 237 85 68 chr10 127887551 127887610 -17701678 - L2 LINE L2 -15 3257 3198 359 222 0 83 chr10 127887624 127887732 -17701556 - MLT1D LTR MaLR -406 99 1 373 294 28 20 chr10 127887936 127888093 -17701195 + MER5B DNA MER1_type 28 189 0 2270 188 36 11 chr10 127888369 127888882 -17700406 - LTR27 LTR ERV1 -11 493 2 2464 66 0 0 chr10 127888906 127889209 -17700079 + AluY SINE Alu 1 303 -8 711 257 93 4 chr10 127890379 127890616 -17698672 - MIR SINE MIR -3 259 2 283 306 259 6 chr10 127891430 127891600 -17697688 + MIR SINE MIR 38 250 -12 400 333 35 0 chr10 127891997 127892141 -17697147 + MIR SINE MIR 44 192 -70 1703 147 104 0 chr10 127892144 127892471 -17696817 + MER46B DNA MER2_type 1 236 0 237 243 0 81 chr10 127892472 127892546 -17696742 + MIR SINE MIR 195 262 0 790 269 25 5 chr10 127892840 127893041 -17696247 - L2 LINE L2 -1096 2218 2014 2346 254 52 12 chr10 127893041 127893718 -17695570 - L2 LINE L2 -1615 1699 996 1878 224 158 9 chr10 127893908 127894492 -17694796 + L2 LINE L2 2191 2861 -453 567 242 39 124 chr10 127894493 127894848 -17694440 - MER46C DNA MER2_type -12 326 2 697 268 97 65 chr10 127894854 127895298 -17693990 + L2 LINE L2 2852 3309 -4 2387 96 6 3 chr10 127895918 127896230 -17693058 + AluSq SINE Alu 1 313 0 268 260 80 19 chr10 127896424 127896594 -17692694 + L1ME LINE L1 5273 5449 -672 478 264 21 71 chr10 127896772 127897011 -17692277 + MLT1I LTR MaLR 166 392 -17 365 226 175 29 chr10 127897265 127897402 -17691886 - L1ME4a LINE L1 -3 6118 5962 272 186 106 26 chr10 127897407 127897520 -17691768 - L1ME4a LINE L1 -273 5848 5727 226 290 21 0 chr10 127898167 127898260 -17691028 + HAL1 LINE L1 2070 2164 -343 346 322 13 40 chr10 127898303 127898452 -17690836 + HAL1b LINE L1 746 890 -458 986 160 16 0 chr10 127898700 127898894 -17690394 - L1M2 LINE L1 -845 5467 5271 1662 190 19 16 chr10 127898900 127899268 -17690020 + L1 LINE L1 4615 4983 -1163 1817 195 17 17 chr10 127899290 127899710 -17689578 + L1MB3 LINE L1 4848 5267 -879 1228 136 50 0 chr10 127900811 127901009 -17688279 - MER3 DNA MER1_type 0 209 2 878 171 35 3 chr10 127901975 127902281 -17687007 + L1MB3 LINE L1 5795 6167 -16 234 176 0 0 chr10 127902546 127902597 -17686691 + CT-rich Low_complexity Low_complexity 1 51 0 695 244 127 18 chr10 127904896 127905125 -17684163 + MIR SINE MIR 8 261 -1 1540 210 3 3 chr10 127905793 127906079 -17683209 + AluJo SINE Alu 1 286 -26 28 0 0 0 chr10 127906212 127906240 -17683048 + AT_rich Low_complexity Low_complexity 1 28 0 197 255 118 0 chr10 127906763 127906814 -17682474 + MIR SINE MIR 133 189 -73 560 244 26 6 chr10 127906926 127907082 -17682206 - Charlie8 DNA MER1_type -1840 577 419 301 208 56 118 chr10 127907212 127907356 -17681932 - Charlie8 DNA MER1_type -2161 256 122 2030 120 9 35 chr10 127907376 127907692 -17681596 + AluSx SINE Alu 1 308 -4 561 290 65 50 chr10 127908008 127908349 -17680939 + MLT1K LTR MaLR 190 535 -53 * 603 240 0 0 chr10 127908344 127908469 -17680819 + Tigger7 DNA MER2_type 216 340 -210 * 752 177 20 7 chr10 127908467 127908614 -17680674 + Tigger7 DNA MER2_type 2343 2491 0 184 327 89 50 chr10 127908662 127908763 -17680525 + MIR SINE MIR 59 163 -99 21 36 0 0 chr10 127909602 127909630 -17679658 + AT_rich Low_complexity Low_complexity 1 28 0 497 217 65 36 chr10 127910050 127910188 -17679100 + L2 LINE L2 3127 3268 -4 225 188 21 21 chr10 127913481 127913529 -17675759 - MER5B DNA MER1_type -1 177 130 2352 246 36 36 chr10 127913658 127914488 -17674800 + L1ME2 LINE L1 3965 4797 -1349 2245 80 28 0 chr10 127914488 127914775 -17674513 + AluSq SINE Alu 1 295 -18 2352 246 36 36 chr10 127914775 127914838 -17674450 + L1ME2 LINE L1 4796 4858 -1288 397 232 80 26 chr10 127915191 127915342 -17673946 + L1ME2 LINE L1 4851 5009 -1137 1557 189 70 6 chr10 127915342 127915717 -17673571 + MSTB LTR MaLR 1 453 -4 2587 227 48 43 chr10 127915720 127916726 -17672562 + L1ME2 LINE L1 5004 6015 -149 2235 119 0 0 chr10 127916726 127917029 -17672259 - AluSx SINE Alu -9 303 1 2587 227 48 43 chr10 127917029 127917114 -17672174 + L1ME2 LINE L1 6015 6098 -66 201 29 88 0 chr10 127917147 127917181 -17672107 + A-rich Low_complexity Low_complexity 2 38 0 3712 131 25 33 chr10 127917181 127917886 -17671402 + L1MB3 LINE L1 5476 6175 -8 297 188 0 0 chr10 127917889 127917953 -17671335 + L1ME2 LINE L1 6094 6157 -7 193 28 0 56 chr10 127917990 127918026 -17671262 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 228 265 0 0 chr10 127918041 127918090 -17671198 + MER5B DNA MER1_type 129 177 -1 3309 214 47 107 chr10 127918348 127919903 -17669385 - L1M4 LINE L1 -2184 3962 2502 200 295 9 36 chr10 127920103 127920160 -17669128 + (TA)n Simple_repeat Simple_repeat 2 56 -54 1970 192 39 55 chr10 127920160 127920671 -17668617 + MLT1D LTR MaLR 1 503 -2 200 295 9 36 chr10 127920671 127920725 -17668563 + (TA)n Simple_repeat Simple_repeat 56 110 0 1474 75 0 0 chr10 127920741 127920928 -17668360 - AluY SINE Alu -2 309 123 22 56 0 0 chr10 127920939 127920975 -17668313 + AT_rich Low_complexity Low_complexity 1 36 0 987 195 0 0 chr10 127921045 127921204 -17668084 - FRAM SINE Alu -5 161 3 366 235 116 32 chr10 127921393 127921644 -17667644 - L1MC/D LINE L1 -2273 5535 5264 1886 170 3 3 chr10 127921903 127922203 -17667085 - AluJb SINE Alu -12 300 1 1147 312 71 70 chr10 127922597 127923873 -17665415 + L2 LINE L2 1924 3252 -20 6900 121 38 29 chr10 127923873 127924816 -17664472 + Tigger3b DNA MER2_type 1 959 -2069 2166 101 0 7 chr10 127924816 127925103 -17664185 + AluSg1 SINE Alu 1 285 -24 6900 121 38 29 chr10 127925103 127925377 -17663911 + Tigger3b DNA MER2_type 959 1229 -2 1147 312 71 70 chr10 127925377 127925399 -17663889 + L2 LINE L2 3252 3272 0 202 302 0 0 chr10 127925580 127925623 -17663665 - L2 LINE L2 -225 3047 3005 855 290 122 17 chr10 127925656 127926073 -17663215 + MLT1K LTR MaLR 24 484 -104 243 327 110 33 chr10 127926116 127926416 -17662872 + L1MEc LINE L1 44 366 -6030 1280 195 101 92 chr10 127926416 127926893 -17662395 + MER31A LTR ERV1 1 481 -4 23 33 0 0 chr10 127926906 127926936 -17662352 + AT_rich Low_complexity Low_complexity 1 30 0 7537 27 16 0 chr10 127927071 127928131 -17661157 - L1PA4 LINE L1 -2 6153 5088 960 221 57 4 chr10 127928132 127928376 -17660912 + LTR31 LTR ERV1 348 604 -15 1162 220 62 18 chr10 127928387 127928728 -17660560 - HAL1 LINE L1 -380 2127 1772 315 232 85 0 chr10 127928755 127928837 -17660451 - HAL1 LINE L1 -986 1521 1433 4160 115 63 73 chr10 127928881 127929674 -17659614 + LTR1 LTR ERV1 1 785 0 3864 107 151 154 chr10 127929707 127931237 -17658051 - pTR5 LTR ERV1 -2 2429 65 1558 240 137 100 chr10 127931264 127932211 -17657077 - HAL1 LINE L1 -1148 1359 353 2366 91 0 7 chr10 127932211 127932520 -17656768 - AluSg1 SINE Alu -2 307 1 1558 240 137 100 chr10 127932520 127932839 -17656449 - HAL1 LINE L1 -2154 353 47 284 297 59 17 chr10 127933324 127933460 -17655828 - MIR SINE MIR -69 139 37 751 168 17 11 chr10 127933598 127933777 -17655511 + CT-rich Low_complexity Low_complexity 1 180 0 315 130 0 0 chr10 127933781 127933827 -17655461 + (TTCTCC)n Simple_repeat Simple_repeat 5 50 0 646 106 8 59 chr10 127933829 127934103 -17655185 + (TCC)n Simple_repeat Simple_repeat 1 259 0 1916 192 83 41 chr10 127935002 127935486 -17653802 + MLT1D LTR MaLR 1 504 -1 281 353 88 0 chr10 127936247 127936349 -17652939 - L2 LINE L2 -17 3255 3145 213 318 109 5 chr10 127936673 127936865 -17652423 + MIR SINE MIR 3 214 -48 33 0 0 0 chr10 127937055 127937088 -17652200 + AT_rich Low_complexity Low_complexity 1 33 0 2320 51 14 24 chr10 127937088 127937381 -17651907 + AluY SINE Alu 1 290 -21 318 276 9 105 chr10 127937394 127937622 -17651666 - L1MC5 LINE L1 -50 7911 7706 2807 86 95 0 chr10 127937633 127938042 -17651246 + LTR7 LTR ERV1 1 448 -2 22715 91 18 14 chr10 127938044 127941319 -17647969 + HERVH LTR ERV1 1 3290 -4423 3563 93 4 6 chr10 127941309 127941812 -17647476 + HERVH LTR ERV1 3492 3993 -3720 * 4610 127 3 1 chr10 127941814 127942475 -17646813 + HERVH LTR ERV1 4488 5149 -2564 1395 134 18 5 chr10 127942476 127942693 -17646595 + HERVH LTR ERV1 5600 5819 -1894 * 2393 100 48 13 chr10 127942691 127943070 -17646218 + HERVH LTR ERV1 7322 7713 0 2898 78 95 0 chr10 127943070 127943479 -17645809 + LTR7 LTR ERV1 1 448 -2 695 268 66 29 chr10 127943548 127943894 -17645394 - L1MC4a LINE L1 -123 7685 7309 397 320 47 0 chr10 127944951 127945079 -17644209 - L2 LINE L2 0 3272 3139 2576 51 0 3 chr10 127945826 127946138 -17643150 + AluY SINE Alu 1 311 0 371 374 18 12 chr10 127946771 127946934 -17642354 + MIR3 SINE MIR 16 179 -29 189 147 0 0 chr10 127946980 127947014 -17642274 + (TGAA)n Simple_repeat Simple_repeat 2 35 0 453 108 0 0 chr10 127948676 127948741 -17640547 - L1ME3A LINE L1 -7 6163 6099 2263 82 0 0 chr10 127948741 127949023 -17640265 - AluY SINE Alu -16 295 14 1419 268 45 47 chr10 127949081 127950077 -17639211 - L1ME LINE L1 -523 5647 4650 309 257 0 0 chr10 127950082 127950156 -17639132 - L1ME LINE L1 -1577 4569 4496 7249 124 8 14 chr10 127950156 127950646 -17638642 - L1PA10 LINE L1 0 6168 5677 2321 100 0 0 chr10 127950646 127950946 -17638342 - AluY SINE Alu -11 300 1 7249 124 8 14 chr10 127950946 127951980 -17637308 - L1PA10 LINE L1 -491 5677 4657 1964 145 0 0 chr10 127951980 127952294 -17636994 - AluSx SINE Alu 0 314 1 7249 124 8 14 chr10 127952294 127952742 -17636546 - L1PA10 LINE L1 -1511 4657 4208 598 224 129 0 chr10 127952742 127952912 -17636376 - MIR SINE MIR -46 216 25 397 185 0 0 chr10 127953524 127953589 -17635699 - AluJo SINE Alu -8 294 230 5050 65 67 0 chr10 127953589 127954234 -17635054 - LTR12 LTR ERV1 0 688 1 4907 89 3 0 chr10 127954234 127954875 -17634413 - HERV9 LTR ERV1 0 8399 7757 2074 122 62 113 chr10 127954870 127955847 -17633441 - HERV9 LTR ERV1 -5176 1720 704 * 1006 141 0 0 chr10 127955848 127955997 -17633291 - HERV9 LTR ERV1 -3495 4904 4756 * 10054 97 19 10 chr10 127955996 127957390 -17631898 - HERV9 LTR ERV1 -5427 2972 1567 2855 123 39 20 chr10 127957387 127957825 -17631463 + HERV9 LTR ERV1 1106 1551 -6848 * 6530 118 15 5 chr10 127957828 127958819 -17630469 - HERV9 LTR ERV1 -7274 1125 40 5115 76 23 23 chr10 127958832 127959520 -17629768 - LTR12 LTR ERV1 0 688 1 1247 176 4 53 chr10 127959520 127959765 -17629523 - AluJo SINE Alu -79 233 1 48 60 0 0 chr10 127959765 127959848 -17629440 + AT_rich Low_complexity Low_complexity 1 83 0 25 0 0 0 chr10 127959919 127959944 -17629344 + AT_rich Low_complexity Low_complexity 1 25 0 29 0 0 0 chr10 127959970 127959999 -17629289 + AT_rich Low_complexity Low_complexity 1 29 0 1549 233 95 101 chr10 127960007 127961213 -17628075 + L1MC5 LINE L1 6041 7239 -722 202 341 78 12 chr10 127961363 127961530 -17627758 - MER5B DNA MER1_type 0 178 1 371 317 59 16 chr10 127961732 127961918 -17627370 - MER117 DNA MER1_type 0 197 4 208 319 71 9 chr10 127962082 127962195 -17627093 - L2 LINE L2 -1 3271 3152 2861 6 0 6 chr10 127962772 127963085 -17626203 - AluYa5 SINE Alu 0 311 1 23 0 0 0 chr10 127963131 127963154 -17626134 + AT_rich Low_complexity Low_complexity 1 23 0 2247 95 3 0 chr10 127963154 127963439 -17625849 - AluY SINE Alu -25 286 1 587 215 54 13 chr10 127964672 127964821 -17624467 + MER5B DNA MER1_type 21 175 -3 536 154 17 68 chr10 127965210 127965327 -17623961 + FLAM_A SINE Alu 24 134 -8 284 316 137 26 chr10 127965739 127965929 -17623359 - L2 LINE L2 -373 2941 2731 1843 208 12 20 chr10 127966081 127966154 -17623134 + L1PB4 LINE L1 5757 5829 -327 2175 96 34 0 chr10 127966154 127966274 -17623014 + AluY SINE Alu 1 115 -196 369 0 0 0 chr10 127966274 127966315 -17622973 + (CA)n Simple_repeat Simple_repeat 2 42 0 2175 96 34 0 chr10 127966315 127966485 -17622803 + AluY SINE Alu 115 301 -10 1843 208 12 20 chr10 127966485 127966814 -17622474 + L1PB4 LINE L1 5829 6156 0 233 264 81 23 chr10 127968059 127968233 -17621055 - L1M4 LINE L1 -815 5331 5148 933 169 18 80 chr10 127968417 127968642 -17620646 - MER20 DNA MER1_type -4 215 5 283 325 58 19 chr10 127969037 127969191 -17620097 + MIR SINE MIR 47 206 -56 249 325 99 21 chr10 127969391 127969582 -17619706 - L1M4 LINE L1 -1908 4238 4033 954 166 39 52 chr10 127969681 127969910 -17619378 + L1MB1 LINE L1 5961 6186 -3 916 275 74 24 chr10 127969896 127970212 -17619076 + L1ME LINE L1 4787 5086 -1078 * 3678 123 17 2 chr10 127970212 127970731 -17618557 - MER1A DNA MER1_type 0 527 1 916 275 74 24 chr10 127970731 127971096 -17618192 + L1ME LINE L1 5086 5510 -654 2300 107 0 3 chr10 128071430 128071730 -17517558 + AluSg SINE Alu 1 299 -11 2479 88 0 0 chr10 128072074 128072393 -17516895 + L1PA8 LINE L1 5854 6172 0 344 215 13 13 chr10 128072433 128072512 -17516776 + AluSp SINE Alu 108 186 -117 1519 162 0 0 chr10 128072512 128072740 -17516548 + AluSq SINE Alu 21 248 -65 249 128 0 0 chr10 128072785 128072832 -17516456 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 283 220 0 40 chr10 128072840 128072940 -17516348 + GA-rich Low_complexity Low_complexity 1 96 0 774 89 0 36 chr10 128073476 128073588 -17515700 + AluSc SINE Alu 195 302 -7 383 313 33 13 chr10 128073724 128073874 -17515414 + MIR SINE MIR 110 262 0 274 276 58 11 chr10 128073972 128074059 -17515229 - L3 LINE CR1 -165 1412 1322 1794 150 0 14 chr10 128074063 128074356 -17514932 - AluSx SINE Alu -23 289 1 2059 78 63 0 chr10 128074599 128074890 -17514398 - AluSq SINE Alu 0 308 1 832 112 7 53 chr10 128075233 128075416 -17513872 + AluY SINE Alu 136 311 0 2081 115 21 0 chr10 128075622 128075908 -17513380 + AluSx SINE Alu 1 292 -20 201 341 37 0 chr10 128076549 128076631 -17512657 + MIR SINE MIR 62 146 -116 1433 58 6 0 chr10 128077411 128077584 -17511704 + L1PA4 LINE L1 5976 6149 -6 228 86 0 0 chr10 128077587 128077622 -17511666 + (TAAAA)n Simple_repeat Simple_repeat 1 35 0 671 139 9 0 chr10 128077924 128078032 -17511256 - L1MC3 LINE L1 -67 7718 7610 284 94 94 62 chr10 128078030 128078094 -17511194 - L1MC/D LINE L1 -2305 5480 5415 * 1536 247 61 2 chr10 128078090 128078532 -17510756 - L1M4 LINE L1 -1224 4922 4455 6528 140 23 20 chr10 128078549 128078658 -17510630 - L1MC1 LINE L1 0 6333 6226 2441 75 10 0 chr10 128078658 128078965 -17510323 - AluY SINE Alu -1 310 1 6528 140 23 20 chr10 128078965 128080097 -17509191 - L1MC1 LINE L1 -107 6226 5081 506 157 74 25 chr10 128080097 128080218 -17509070 + AluJb SINE Alu 2 128 -184 316 278 37 0 chr10 128080551 128080659 -17508629 - L2 LINE L2 -453 2861 2750 430 263 51 17 chr10 128080659 128080834 -17508454 - LTR33A LTR ERVL 0 523 343 330 316 201 7 chr10 128080981 128081120 -17508168 - LTR50 LTR ERVL -612 183 18 408 143 163 10 chr10 128081442 128081540 -17507748 - Charlie1 DNA MER1_type -1 2760 2648 481 286 196 5 chr10 128081559 128081779 -17507509 - MIR SINE MIR 0 262 1 2319 106 0 3 chr10 128082488 128082791 -17506497 + AluSp SINE Alu 1 302 -11 1316 88 0 6 chr10 128082800 128082970 -17506318 + AluSx SINE Alu 40 208 -104 1132 92 0 0 chr10 128082970 128083123 -17506165 + AluSg/x SINE Alu 159 311 -1 761 143 96 38 chr10 128083801 128084010 -17505278 - Charlie1 DNA MER1_type -1 2760 2540 1643 170 16 54 chr10 128084013 128084330 -17504958 - AluJo SINE Alu -7 305 1 4256 126 63 20 chr10 128084334 128085066 -17504222 - L1MD1 LINE L1 -1 6241 5479 4694 161 52 5 chr10 128085099 128086357 -17502931 - L1MB3 LINE L1 -3 6416 5099 3756 161 46 25 chr10 128086350 128087070 -17502218 - L1MB3 LINE L1 -5529 855 121 * 3419 202 50 30 chr10 128087068 128087416 -17501872 - L1M4 LINE L1 -1836 4310 3971 * 2146 118 0 16 chr10 128087416 128087731 -17501557 - AluSx SINE Alu -2 310 1 3419 202 50 30 chr10 128087731 128088292 -17500996 - L1M4 LINE L1 -2175 3971 3382 243 149 0 0 chr10 128088327 128088374 -17500914 - L1MB3 LINE L1 -7 6176 6130 1493 211 4 4 chr10 128088391 128088671 -17500617 - AluJo SINE Alu -30 282 3 950 169 0 0 chr10 128088674 128088834 -17500454 - L1MB5 LINE L1 -36 6138 5979 1580 211 26 14 chr10 128088834 128088969 -17500319 - MER4D LTR ERV1 0 903 771 1943 124 69 36 chr10 128088969 128089332 -17499956 + THE1C LTR MaLR 1 375 0 1580 211 26 14 chr10 128089332 128089547 -17499741 - MER4D LTR ERV1 -132 771 549 675 65 11 0 chr10 128089552 128089644 -17499644 + AluSc SINE Alu 1 93 -216 539 155 19 0 chr10 128089774 128089877 -17499411 + L1MB3 LINE L1 6072 6176 -7 1904 148 0 3 chr10 128089913 128090241 -17499047 + AluJo SINE Alu 1 327 0 406 226 78 0 chr10 128090615 128090730 -17498558 - L1MC4a LINE L1 -1906 5902 5779 647 243 51 11 chr10 128091522 128091699 -17497589 + L1MB7 LINE L1 -74 109 -6353 * 2557 186 33 31 chr10 128091682 128092398 -17496890 + L1MB7 LINE L1 565 1274 -4851 821 168 77 5 chr10 128092400 128092596 -17496692 + L1MB7 LINE L1 1391 1600 -4964 * 4073 164 48 5 chr10 128092590 128093347 -17495941 + L1MB7 LINE L1 5770 6558 -44 27 36 0 36 chr10 128093404 128093431 -17495857 + AT_rich Low_complexity Low_complexity 1 27 -27 2158 108 0 7 chr10 128093431 128093719 -17495569 - AluSg SINE Alu -24 286 1 27 36 0 36 chr10 128093719 128093747 -17495541 + AT_rich Low_complexity Low_complexity 27 54 0 282 345 43 90 chr10 128093752 128094120 -17495168 - L2 LINE L2 -6 3266 2916 946 116 0 0 chr10 128094138 128094259 -17495029 - AluSq/x SINE Alu -179 133 13 23 0 0 0 chr10 128094259 128094282 -17495006 + AT_rich Low_complexity Low_complexity 1 23 0 267 230 115 0 chr10 128095313 128095400 -17493888 + MIR SINE MIR 92 188 -74 217 259 0 74 chr10 128095742 128095823 -17493465 + L3 LINE CR1 965 1039 -538 417 324 93 0 chr10 128095827 128095966 -17493322 + L2 LINE L2 3121 3272 0 206 333 91 10 chr10 128096000 128096099 -17493189 + L3 LINE CR1 1029 1135 -442 1280 188 35 53 chr10 128096175 128096400 -17492888 + L1M4 LINE L1 2945 3162 -2984 750 202 0 0 chr10 128096400 128096524 -17492764 + FLAM_A SINE Alu 1 124 -9 1280 188 35 53 chr10 128096524 128096692 -17492596 + L1M4 LINE L1 3162 3331 -2815 8503 204 29 33 chr10 128096698 128097128 -17492160 + L1MB5 LINE L1 2877 3307 -2867 1808 157 7 17 chr10 128097128 128097422 -17491866 + AluJo SINE Alu 3 293 -19 8503 204 29 33 chr10 128097422 128098354 -17490934 + L1MB5 LINE L1 3307 4241 -1933 207 0 0 0 chr10 128098354 128098377 -17490911 + (TA)n Simple_repeat Simple_repeat 2 24 0 8503 204 29 33 chr10 128098377 128099092 -17490196 + L1MB5 LINE L1 4241 4957 -1217 2261 88 3 7 chr10 128099092 128099388 -17489900 + AluY SINE Alu 1 295 -16 8503 204 29 33 chr10 128099388 128100429 -17488859 + L1MB5 LINE L1 4957 5982 -192 1477 154 67 0 chr10 128100429 128100682 -17488606 + MER49 LTR ERV1 1 270 -653 916 75 75 0 chr10 128100761 128100920 -17488368 - AluY SINE Alu -13 298 128 228 305 114 0 chr10 128101534 128101639 -17487649 - MIR SINE MIR 0 262 146 817 278 55 28 chr10 128101640 128101893 -17487395 - MIR SINE MIR -3 259 2 2235 108 0 0 chr10 128102858 128103153 -17486135 - AluSx SINE Alu -15 297 3 21 71 0 0 chr10 128103155 128103197 -17486091 + AT_rich Low_complexity Low_complexity 1 42 0 22 35 0 0 chr10 128103356 128103385 -17485903 + AT_rich Low_complexity Low_complexity 1 29 0 427 233 136 10 chr10 128103409 128103512 -17485776 + L2 LINE L2 3150 3265 -7 402 244 24 73 chr10 128104991 128105114 -17484174 - MIR SINE MIR -108 154 38 2060 109 21 0 chr10 128105259 128105543 -17483745 + AluSc SINE Alu 1 290 -19 585 302 75 12 chr10 128105762 128106017 -17483271 + L1ME LINE L1 5515 5785 -336 437 225 16 28 chr10 128106141 128106300 -17482988 + L1P5 LINE L1 5315 5480 -676 760 295 62 7 chr10 128106367 128106672 -17482616 + L1ME4a LINE L1 5641 5962 -208 201 94 0 0 chr10 128106826 128106858 -17482430 + (TA)n Simple_repeat Simple_repeat 2 33 0 282 234 70 86 chr10 128106873 128107001 -17482287 + L1ME4a LINE L1 5950 6075 -46 335 137 44 22 chr10 128107023 128107346 -17481942 + (TA)n Simple_repeat Simple_repeat 1 330 0 207 0 0 0 chr10 128107348 128107371 -17481917 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2096 101 3 28 chr10 128107376 128107663 -17481625 - AluSx SINE Alu -30 282 3 23 0 0 0 chr10 128109925 128109948 -17479340 + AT_rich Low_complexity Low_complexity 1 23 0 898 101 8 0 chr10 128109955 128110074 -17479214 - FLAM_C SINE Alu -23 120 1 1106 23 0 0 chr10 128110183 128110311 -17478977 + L1PA5 LINE L1 6016 6143 -11 21 36 0 0 chr10 128110311 128110339 -17478949 + AT_rich Low_complexity Low_complexity 1 28 0 1785 157 7 17 chr10 128110819 128111112 -17478176 - AluJo SINE Alu -22 290 1 1536 203 7 10 chr10 128111786 128112082 -17477206 + AluJb SINE Alu 1 295 -17 32 43 0 0 chr10 128112655 128112701 -17476587 + AT_rich Low_complexity Low_complexity 1 46 0 526 144 5 219 chr10 128114141 128114263 -17475025 - MER5B DNA MER1_type -30 148 78 2437 81 0 3 chr10 128114263 128114573 -17474715 - AluSx SINE Alu -3 309 1 526 144 5 219 chr10 128114573 128114637 -17474651 - MER5B DNA MER1_type -100 78 2 264 257 181 41 chr10 128115311 128115482 -17473806 + MLT1K LTR MaLR 169 363 -225 180 0 0 0 chr10 128115745 128115765 -17473523 + (A)n Simple_repeat Simple_repeat 1 20 0 547 225 113 6 chr10 128116781 128116941 -17472347 + MER5B DNA MER1_type 2 178 0 422 324 83 20 chr10 128116955 128117159 -17472129 + MIR SINE MIR 43 259 -3 876 195 0 46 chr10 128117558 128117732 -17471556 - FRAM SINE Alu 0 166 1 2191 109 10 0 chr10 128117894 128118198 -17471090 - AluSx SINE Alu -5 307 1 2209 127 0 0 chr10 128118425 128118724 -17470564 + AluSx SINE Alu 3 301 -11 201 261 58 14 chr10 128119262 128119331 -17469957 - MIR3 SINE MIR -51 157 86 213 309 94 34 chr10 128119413 128119562 -17469726 - MIR3 SINE MIR -49 159 2 2778 13 0 6 chr10 128123682 128123995 -17465293 - AluY SINE Alu 0 311 1 521 261 25 70 chr10 128124193 128124434 -17464854 + L1MC5 LINE L1 7696 7925 -36 279 345 70 14 chr10 128124602 128124744 -17464544 + L2 LINE L2 3122 3271 -1 649 269 30 15 chr10 128124824 128125021 -17464267 - MIR SINE MIR -12 250 51 2162 82 0 53 chr10 128125361 128125665 -17463623 + AluSg SINE Alu 1 288 -22 572 227 211 23 chr10 128126299 128126559 -17462729 + L1ME LINE L1 5414 5722 -440 2286 97 0 0 chr10 128126650 128126948 -17462340 + AluSc SINE Alu 1 298 -11 201 316 68 30 chr10 128129717 128129850 -17459438 - L2 LINE L2 -12 3301 3164 21 0 0 0 chr10 128130615 128130636 -17458652 + AT_rich Low_complexity Low_complexity 1 21 0 215 244 0 0 chr10 128132008 128132053 -17457235 + (CATATA)n Simple_repeat Simple_repeat 3 47 0 228 327 69 10 chr10 128132278 128132379 -17456909 + MIR SINE MIR 40 146 -62 182 204 41 82 chr10 128133347 128133396 -17455892 - L2 LINE L2 -12 3301 3255 243 0 0 0 chr10 128133879 128133906 -17455382 + (TG)n Simple_repeat Simple_repeat 2 28 0 1595 164 4 16 chr10 128133906 128134162 -17455126 - AluJb SINE Alu -27 285 33 22 35 0 0 chr10 128134674 128134703 -17454585 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr10 128134809 128134832 -17454456 + AT_rich Low_complexity Low_complexity 1 23 0 204 125 0 0 chr10 128135337 128135369 -17453919 + (GAAAA)n Simple_repeat Simple_repeat 2 33 0 819 132 23 8 chr10 128135672 128135801 -17453487 - FLAM_C SINE Alu -1 132 2 1349 159 0 39 chr10 128136514 128136746 -17452542 - AluJo SINE Alu -18 294 72 2095 125 0 7 chr10 128137255 128137559 -17451729 + AluSx SINE Alu 1 302 -10 2132 102 3 7 chr10 128137995 128138299 -17450989 + AluSg SINE Alu 1 303 0 198 143 0 0 chr10 128138623 128138658 -17450630 + (CA)n Simple_repeat Simple_repeat 2 36 0 2078 122 0 20 chr10 128138893 128139196 -17450092 + AluSx SINE Alu 1 297 -15 739 207 60 30 chr10 128139335 128139538 -17449750 + MIR SINE MIR 54 262 0 516 240 8 24 chr10 128139731 128139856 -17449432 - MER5B DNA MER1_type -2 176 54 513 172 0 0 chr10 128139858 128139980 -17449308 + (CATA)n Simple_repeat Simple_repeat 2 123 0 227 100 0 0 chr10 128139993 128140023 -17449265 + MER5B DNA MER1_type 137 166 -12 373 233 0 0 chr10 128140292 128140365 -17448923 - MER81 DNA DNA -16 98 26 990 209 15 0 chr10 128140430 128140636 -17448652 - MER3 DNA MER1_type 0 209 1 361 265 49 76 chr10 128141022 128141245 -17448043 + L2 LINE L2 2834 3050 -222 208 283 0 0 chr10 128141491 128141544 -17447744 - MIR SINE MIR -108 154 102 200 167 42 21 chr10 128141593 128141641 -17447647 - L2 LINE L2 -2 3270 3222 1457 316 64 92 chr10 128142375 128142815 -17446473 + L1MCa LINE L1 24 475 -5951 624 182 27 0 chr10 128142815 128142925 -17446363 + AluJo/FLAM SINE Alu 4 116 -186 2424 74 0 16 chr10 128142926 128143236 -17446052 - AluSg SINE Alu -5 305 1 1457 316 64 92 chr10 128143236 128143540 -17445748 + L1MCa LINE L1 474 749 -5677 2831 154 39 55 chr10 128143540 128143844 -17445444 + L1MC2 LINE L1 5688 5995 -349 2177 115 7 0 chr10 128143844 128144148 -17445140 + AluSc SINE Alu 1 306 -3 2831 154 39 55 chr10 128144148 128144511 -17444777 + L1MC2 LINE L1 5995 6344 0 189 0 0 0 chr10 128144517 128144538 -17444750 + (CA)n Simple_repeat Simple_repeat 2 22 0 261 96 96 0 chr10 128144656 128144739 -17444549 + T-rich Low_complexity Low_complexity 3 93 0 1496 195 46 17 chr10 128144747 128145049 -17444239 - AluJo SINE Alu -1 311 1 925 150 36 0 chr10 128145419 128145586 -17443702 - L1MC3 LINE L1 -108 7677 7505 204 67 0 0 chr10 128145587 128145617 -17443671 + (CAAAAA)n Simple_repeat Simple_repeat 1 30 0 1350 239 98 27 chr10 128145618 128146136 -17443152 + MER34B LTR ERV1 11 565 0 315 310 35 49 chr10 128146493 128146696 -17442592 + MER34B-int LTR ERV1 309 508 -5823 2504 63 0 0 chr10 128147116 128147416 -17441872 + AluY SINE Alu 1 300 -11 1842 148 19 111 chr10 128147512 128147979 -17441309 - MSTB1 LTR MaLR -2 430 7 1885 158 0 0 chr10 128148071 128148395 -17440893 + AluJb SINE Alu 1 324 0 494 194 16 40 chr10 128148930 128149054 -17440234 + MER34B-int LTR ERV1 1541 1661 -4670 822 202 104 53 chr10 128149088 128149216 -17440072 + MER34B-int LTR ERV1 1021 1141 -3982 2431 93 0 3 chr10 128149216 128149528 -17439760 - AluY SINE Alu 0 311 1 822 202 104 53 chr10 128149528 128149954 -17439334 + MER34B-int LTR ERV1 1141 1826 -3297 7252 191 83 86 chr10 128149975 128153165 -17436123 + MER34B-int LTR ERV1 1683 6330 -1 1039 264 156 6 chr10 128153171 128153659 -17435629 + MER34B LTR ERV1 5 565 0 4230 146 107 25 chr10 128153660 128154023 -17435265 - L1MC3 LINE L1 -277 7508 7176 2253 89 0 0 chr10 128154023 128154316 -17434972 + AluY SINE Alu 1 293 -18 4230 146 107 25 chr10 128154316 128154532 -17434756 - L1MC3 LINE L1 -609 7176 6979 1862 152 15 29 chr10 128154532 128154874 -17434414 + MER44D DNA MER2_type 1 607 -2 4230 146 107 25 chr10 128154874 128155210 -17434078 - L1MC3 LINE L1 -806 6979 6517 815 163 0 0 chr10 128155212 128155341 -17433947 - FLAM_C SINE Alu -4 129 1 292 224 41 31 chr10 128155345 128155443 -17433845 + L1ME4a LINE L1 5704 5802 -2006 299 170 28 57 chr10 128155481 128155587 -17433701 + L1ME4a LINE L1 5930 6032 -89 441 198 178 0 chr10 128155594 128155695 -17433593 + MER106A DNA MER1_type 1 119 -117 292 153 0 17 chr10 128155692 128155751 -17433537 + MER106B DNA MER1_type 1002 1059 0 * 2289 86 0 0 chr10 128155845 128156155 -17433133 + AluSg SINE Alu 1 310 0 299 235 15 0 chr10 128156280 128156348 -17432940 - MER5A DNA MER1_type -120 69 1 319 371 61 0 chr10 128157047 128157179 -17432109 + L2 LINE L2 3129 3268 -4 1728 127 7 13 chr10 128157805 128158104 -17431184 + L1MA4A LINE L1 6005 6301 -2 609 210 64 86 chr10 128158135 128158433 -17430855 + L1MB8 LINE L1 5366 5652 -744 428 270 79 16 chr10 128158481 128158607 -17430681 + L2 LINE L2 3180 3313 0 287 260 78 13 chr10 128159681 128159758 -17429530 - MIR SINE MIR -150 112 31 201 246 6 164 chr10 128159807 128159978 -17429310 - MIR3 SINE MIR -20 188 45 21 36 0 0 chr10 128160086 128160114 -17429174 + AT_rich Low_complexity Low_complexity 1 28 0 2214 77 28 0 chr10 128160114 128160399 -17428889 - AluSp SINE Alu -20 293 1 254 250 89 54 chr10 128162291 128162403 -17426885 + MIR SINE MIR 77 192 -70 207 88 0 0 chr10 128162443 128162477 -17426811 + (T)n Simple_repeat Simple_repeat 1 34 0 2697 30 0 0 chr10 128162497 128162799 -17426489 + AluY SINE Alu 1 302 -9 612 83 0 0 chr10 128163710 128163794 -17425494 + Alu SINE Alu 225 308 -3 1911 75 17 0 chr10 128163983 128164223 -17425065 + AluY SINE Alu 40 283 -28 1195 198 18 57 chr10 128164711 128165045 -17424243 + L1MB8 LINE L1 5795 6115 -63 2154 109 0 3 chr10 128165045 128165352 -17423936 + AluSp SINE Alu 1 306 0 986 235 39 33 chr10 128165361 128165836 -17423452 + L1MC3 LINE L1 2212 2693 -3689 2506 50 10 0 chr10 128165836 128166139 -17423149 + AluY SINE Alu 1 306 -5 4109 236 54 6 chr10 128166139 128166627 -17422661 + L1MC3 LINE L1 3203 3666 -2716 213 39 0 0 chr10 128166627 128166653 -17422635 + (GAAAA)n Simple_repeat Simple_repeat 4 29 0 4109 236 54 6 chr10 128166653 128167425 -17421863 + L1MC3 LINE L1 3666 4524 -1858 964 222 11 18 chr10 128167418 128167693 -17421595 - L1 LINE L1 -1104 5042 4770 * 2510 217 82 76 chr10 128167688 128168072 -17421216 + L1MC3 LINE L1 4433 4813 -1569 2544 55 3 0 chr10 128168072 128168382 -17420906 + AluY SINE Alu 1 311 0 2510 217 82 76 chr10 128168382 128169037 -17420251 + L1MC3 LINE L1 4813 5478 -904 689 199 107 0 chr10 128169158 128169289 -17419999 + FRAM SINE Alu 8 152 -24 35 0 0 0 chr10 128169290 128169325 -17419963 + AT_rich Low_complexity Low_complexity 1 35 0 3655 232 15 53 chr10 128169344 128169384 -17419904 + L1MC3 LINE L1 5557 5597 -2424 2201 112 3 0 chr10 128169384 128169687 -17419601 - AluSx SINE Alu -8 304 1 3655 232 15 53 chr10 128169687 128170860 -17418428 + L1MC3 LINE L1 5597 6723 -1298 2339 106 3 0 chr10 128171532 128171844 -17417444 - AluSp SINE Alu 0 313 1 1999 135 0 0 chr10 128172619 128172920 -17416368 - AluSx SINE Alu 0 301 1 3179 195 120 92 chr10 128172980 128173423 -17415865 + L1MC3 LINE L1 6724 7153 -868 2643 32 0 7 chr10 128173423 128173731 -17415557 + AluY SINE Alu 1 306 -5 3179 195 120 92 chr10 128173731 128173881 -17415407 + L1MC3 LINE L1 7153 7297 -724 360 244 12 0 chr10 128173881 128173963 -17415325 + MLT1F1 LTR MaLR 49 131 -436 3179 195 120 92 chr10 128173963 128174536 -17414752 + L1MC3 LINE L1 7297 8007 -14 2870 225 72 81 chr10 128174552 128174782 -17414506 + L1ME2 LINE L1 3856 4087 -2075 2286 96 3 7 chr10 128174782 128175084 -17414204 - AluSg SINE Alu -9 301 1 2870 225 72 81 chr10 128175084 128175403 -17413885 + L1ME2 LINE L1 4087 4407 -1755 1669 197 14 0 chr10 128175403 128175692 -17413596 - AluJb SINE Alu -14 298 6 2870 225 72 81 chr10 128175692 128175773 -17413515 + L1ME2 LINE L1 4407 4487 -1675 1616 186 51 3 chr10 128175773 128176068 -17413220 + AluJo SINE Alu 1 309 -3 2870 225 72 81 chr10 128176068 128176424 -17412864 + L1ME2 LINE L1 4487 4845 -1317 2210 92 0 33 chr10 128176424 128176729 -17412559 + AluSx SINE Alu 3 297 -15 2870 225 72 81 chr10 128176729 128177305 -17411983 + L1ME2 LINE L1 4845 5381 -781 1783 95 6 104 chr10 128177305 128177622 -17411666 + AluSx SINE Alu 1 286 -16 2870 225 72 81 chr10 128177622 128178029 -17411259 + L1ME2 LINE L1 5381 5790 -372 1075 193 100 14 chr10 128178030 128178372 -17410916 + MLT2C1 LTR ERVL 1 298 -99 326 221 15 0 chr10 128178378 128178446 -17410842 + L1ME2 LINE L1 5788 5856 -308 2097 134 10 0 chr10 128178853 128179151 -17410137 + AluSx SINE Alu 1 301 -11 838 183 61 35 chr10 128180328 128180558 -17408730 + L1ME2 LINE L1 5862 6097 -67 2703 32 0 13 chr10 128180558 128180872 -17408416 - AluY SINE Alu -1 310 1 329 268 45 77 chr10 128180937 128181157 -17408131 + L1MC4 LINE L1 7829 8041 -1 9497 172 26 22 chr10 128181217 128182635 -17406653 + L1MA2 LINE L1 19 1429 -6136 2163 133 3 0 chr10 128182635 128182936 -17406352 - AluSq SINE Alu -11 302 1 9497 172 26 22 chr10 128182936 128183344 -17405944 + L1MA2 LINE L1 1429 1856 -5709 2243 154 63 19 chr10 128183344 128183713 -17405575 + MSTA LTR MaLR 1 391 -37 2383 94 0 0 chr10 128183713 128184012 -17405276 - AluY SINE Alu -12 299 1 2243 154 63 19 chr10 128184012 128184052 -17405236 + MSTA LTR MaLR 391 428 0 9497 172 26 22 chr10 128184052 128184065 -17405223 + L1MA2 LINE L1 1856 1867 -5698 8931 166 19 12 chr10 128184057 128185692 -17403596 + MSTA-int LTR MaLR 6 1651 0 * 2240 124 25 3 chr10 128185692 128186056 -17403232 + MSTA LTR MaLR 1 372 -56 324 102 0 0 chr10 128186056 128186105 -17403183 + (TC)n Simple_repeat Simple_repeat 1 49 0 2125 105 20 14 chr10 128186105 128186401 -17402887 - AluSc SINE Alu -11 298 1 346 115 66 0 chr10 128186401 128186462 -17402826 + MSTA LTR MaLR 364 428 0 15195 140 23 13 chr10 128186462 128188421 -17400867 + L1MA2 LINE L1 1851 3787 -3936 2358 88 0 3 chr10 128188421 128188718 -17400570 - AluY SINE Alu -15 296 1 15195 140 23 13 chr10 128188718 128190574 -17398714 + L1MA2 LINE L1 3787 5621 -2102 2180 126 3 0 chr10 128190574 128190868 -17398420 + AluSx SINE Alu 1 295 -17 15195 140 23 13 chr10 128190868 128191884 -17397404 + L1MA2 LINE L1 5621 6624 -1099 2298 87 20 3 chr10 128191884 128192182 -17397106 + AluSp SINE Alu 1 303 -10 15195 140 23 13 chr10 128192182 128193141 -17396147 + L1MA2 LINE L1 6624 7717 -6 805 215 31 9 chr10 128193160 128193383 -17395905 + L1M4 LINE L1 4171 4398 -1748 720 177 8 0 chr10 128193383 128193507 -17395781 + FLAM_C SINE Alu 13 137 -6 1484 214 37 21 chr10 128193511 128193940 -17395348 + L1M4 LINE L1 4377 4812 -1334 1668 140 12 0 chr10 128193940 128194183 -17395105 + AluSg SINE Alu 1 246 -64 684 83 0 0 chr10 128194347 128194443 -17394845 + (GGAA)n Simple_repeat Simple_repeat 3 98 0 240 35 0 0 chr10 128194444 128194473 -17394815 + (GGGGA)n Simple_repeat Simple_repeat 1 29 0 977 190 22 6 chr10 128194475 128194654 -17394634 + FRAM SINE Alu 1 174 -2 379 285 233 19 chr10 128194892 128195162 -17394126 - L2 LINE L2 -67 3246 2919 1004 331 93 55 chr10 128195331 128195870 -17393418 - L2 LINE L2 -1 3271 2754 2185 96 3 32 chr10 128195870 128196183 -17393105 + AluSq SINE Alu 1 304 -9 216 0 0 0 chr10 128196189 128196213 -17393075 + (CAAT)n Simple_repeat Simple_repeat 2 25 0 1004 331 93 55 chr10 128196213 128196672 -17392616 - L2 LINE L2 -522 2750 2225 1860 129 8 0 chr10 128196672 128196928 -17392360 + AluSq SINE Alu 1 258 -55 355 381 40 0 chr10 128196928 128197151 -17392137 - L2 LINE L2 -1388 1926 1695 240 105 0 0 chr10 128197151 128197189 -17392099 + AluSq SINE Alu 255 292 -7 258 294 0 20 chr10 128197368 128197470 -17391818 + L1MC5 LINE L1 7806 7905 -56 726 337 49 20 chr10 128197543 128198035 -17391253 - L2 LINE L2 -1124 2190 1685 29 60 0 0 chr10 128199577 128199627 -17389661 + AT_rich Low_complexity Low_complexity 1 50 0 23 0 0 0 chr10 128199808 128199831 -17389457 + AT_rich Low_complexity Low_complexity 1 23 0 503 285 32 0 chr10 128200010 128200133 -17389155 - MIR SINE MIR -108 154 28 418 85 0 0 chr10 128200319 128200378 -17388910 + Alu SINE Alu 1 59 -253 1145 108 0 6 chr10 128200690 128200857 -17388431 + MLT2A1 LTR ERVL 197 362 -82 646 247 11 0 chr10 128200865 128201055 -17388233 + L1PBa LINE L1 6 197 -6666 * 4412 129 19 0 chr10 128201052 128201827 -17387461 + L1PBa LINE L1 1392 2181 -4682 743 201 98 6 chr10 128201873 128202047 -17387241 - MIR SINE MIR -10 252 63 472 324 18 102 chr10 128203969 128204302 -17384986 - L2 LINE L2 0 3272 2968 216 291 39 110 chr10 128204400 128204462 -17384826 - L2 LINE L2 -564 2750 2700 2139 135 0 3 chr10 128204462 128204765 -17384523 + AluJb SINE Alu 1 302 -10 216 291 39 110 chr10 128204765 128204829 -17384459 - L2 LINE L2 -614 2700 2633 2990 20 14 0 chr10 128206046 128206395 -17382893 - L1PA4 LINE L1 -1 6154 5801 1871 131 6 1 chr10 128206449 128206825 -17382463 + HSMAR2 DNA Mariner 289 710 -592 307 290 20 20 chr10 128207233 128207333 -17381955 + L1ME1 LINE L1 1717 1816 -4580 571 296 45 0 chr10 128207333 128207600 -17381688 - L1MCa LINE L1 -2655 3771 3493 41246 29 22 2 chr10 128207601 128213626 -17375662 - L1PA2 LINE L1 -2 6153 1 3440 214 46 30 chr10 128213627 128214481 -17374807 - L1MCa LINE L1 -2909 3517 2678 2369 68 3 3 chr10 128214481 128214777 -17374511 - AluSc SINE Alu -9 300 5 3440 214 46 30 chr10 128214777 128215170 -17374118 - L1MCa LINE L1 -3744 2682 2249 3360 174 9 32 chr10 128215170 128215865 -17373423 + L1MB4 LINE L1 5496 6174 -6 275 315 105 12 chr10 128215931 128216188 -17373100 + L1ME1 LINE L1 4823 5103 -1112 244 267 63 26 chr10 128216206 128216397 -17372891 + L1ME1 LINE L1 5148 5345 -870 1095 174 0 0 chr10 128216407 128216579 -17372709 + AluJo SINE Alu 24 195 -117 687 219 98 0 chr10 128217667 128217882 -17371406 + L1ME1 LINE L1 5997 6232 -3 4108 156 61 22 chr10 128217983 128219138 -17370150 + L1MB2 LINE L1 4966 6164 -7 350 314 128 0 chr10 128219204 128219306 -17369982 + MER91A DNA MER1_type 2 116 -80 516 72 0 0 chr10 128219317 128219386 -17369902 + (GGAA)n Simple_repeat Simple_repeat 2 70 0 208 250 0 0 chr10 128219398 128219442 -17369846 + GA-rich Low_complexity Low_complexity 2 45 0 632 192 66 60 chr10 128219754 128219936 -17369352 - MIR SINE MIR -7 255 73 240 328 66 60 chr10 128220188 128220371 -17368917 + L2 LINE L2 2870 3053 -219 346 289 263 0 chr10 128220479 128220669 -17368619 - MIR SINE MIR -15 247 8 216 365 0 0 chr10 128220694 128220757 -17368531 + L2 LINE L2 3201 3263 -9 330 225 50 50 chr10 128221671 128221791 -17367497 - MIR SINE MIR -80 182 63 495 230 180 12 chr10 128221932 128222093 -17367195 + AluSg/x SINE Alu 121 308 -1 239 330 70 30 chr10 128222094 128222194 -17367094 - MIR SINE MIR -139 123 20 402 100 0 0 chr10 128225551 128225611 -17363677 + (CA)n Simple_repeat Simple_repeat 1 60 0 2283 74 0 29 chr10 128226654 128226966 -17362322 + AluY SINE Alu 1 303 -8 2036 108 73 27 chr10 128227539 128227562 -17361726 + L1PB2 LINE L1 5766 5786 -365 324 0 0 0 chr10 128227562 128227598 -17361690 + (CA)n Simple_repeat Simple_repeat 2 37 0 2036 108 73 27 chr10 128227598 128227943 -17361345 + L1PB2 LINE L1 5786 6151 0 246 385 52 0 chr10 128228060 128228156 -17361132 - MIR SINE MIR -160 102 2 27 0 0 0 chr10 128228163 128228190 -17361098 + AT_rich Low_complexity Low_complexity 1 27 0 195 189 0 0 chr10 128228254 128228291 -17360997 + L2 LINE L2 3272 3308 -5 406 250 171 33 chr10 128228326 128228448 -17360840 + MIR SINE MIR 46 194 -68 2404 81 3 13 chr10 128228448 128228758 -17360530 + AluSp SINE Alu 1 307 -6 406 250 171 33 chr10 128228758 128228787 -17360501 + MIR SINE MIR 194 218 -44 767 179 30 6 chr10 128228819 128228987 -17360301 + MER58B DNA MER1_type 167 338 -3 548 322 71 60 chr10 128229281 128229690 -17359598 - L2 LINE L2 -216 3056 2638 435 256 71 146 chr10 128230100 128230436 -17358852 + L3 LINE CR1 1262 1572 -5 25 0 0 0 chr10 128230491 128230516 -17358772 + AT_rich Low_complexity Low_complexity 1 25 0 225 94 0 0 chr10 128230557 128230589 -17358699 + (GAA)n Simple_repeat Simple_repeat 3 34 0 2278 119 0 3 chr10 128231632 128231943 -17357345 - AluSx SINE Alu -2 310 1 204 125 0 0 chr10 128232049 128232081 -17357207 + (TCCCC)n Simple_repeat Simple_repeat 4 35 0 2538 66 3 0 chr10 128232083 128232388 -17356900 - AluY SINE Alu -5 306 1 384 66 66 0 chr10 128232397 128232458 -17356830 - L1PA14 LINE L1 -2 6159 6095 312 200 133 0 chr10 128232544 128232619 -17356669 - MIR SINE MIR -65 197 113 189 388 0 0 chr10 128232759 128232826 -17356462 + L2 LINE L2 2995 3061 -211 2381 56 0 13 chr10 128233041 128233345 -17355943 + AluY SINE Alu 1 300 -11 216 333 86 26 chr10 128233735 128233852 -17355436 + L2 LINE L2 3184 3307 -6 473 277 3 23 chr10 128233934 128234110 -17355178 - MIR SINE MIR -65 197 30 1701 168 20 3 chr10 128234288 128234580 -17354708 + AluJb SINE Alu 1 297 -15 603 126 0 0 chr10 128234590 128234685 -17354603 + AluSg/x SINE Alu 209 303 -7 2291 96 0 3 chr10 128234727 128235030 -17354258 + AluSc SINE Alu 1 302 -7 691 265 30 0 chr10 128235412 128235578 -17353710 + MIR SINE MIR 88 258 -4 576 238 33 79 chr10 128235652 128235866 -17353422 - MIR SINE MIR -1 261 58 1083 169 0 0 chr10 128236376 128236542 -17352746 - FRAM SINE Alu 0 166 1 4695 31 0 6 chr10 128236726 128237275 -17352013 + L1PA5 LINE L1 5609 6154 0 391 235 51 0 chr10 128237403 128237501 -17351787 + MIR SINE MIR 47 149 -113 582 230 43 7 chr10 128237501 128237640 -17351648 + MER5A DNA MER1_type 46 189 0 619 236 29 81 chr10 128237657 128237831 -17351457 - MER5B DNA MER1_type -6 172 8 414 277 0 0 chr10 128237833 128237927 -17351361 + MIR SINE MIR 158 251 -11 512 143 58 78 chr10 128237981 128238106 -17351182 + L1ME4a LINE L1 5971 6094 -27 2008 102 4 0 chr10 128238106 128238381 -17350907 - AluSx SINE Alu -1 311 36 512 143 58 78 chr10 128238381 128238409 -17350879 + L1ME4a LINE L1 6094 6121 0 180 289 0 0 chr10 128238522 128238560 -17350728 - MIR SINE MIR -112 150 113 1977 119 6 31 chr10 128238893 128239213 -17350075 - AluSx SINE Alu 0 312 1 199 210 32 81 chr10 128239324 128239386 -17349902 - MIR SINE MIR -11 251 193 946 142 19 123 chr10 128239403 128239467 -17349821 - MER5A DNA MER1_type 0 189 120 2037 133 0 3 chr10 128239467 128239769 -17349519 + AluSx SINE Alu 1 301 -11 946 142 19 123 chr10 128239769 128239841 -17349447 - MER5A DNA MER1_type -69 120 79 2124 104 0 0 chr10 128239841 128240144 -17349144 - AluSg SINE Alu 0 303 1 946 142 19 123 chr10 128240144 128240216 -17349072 - MER5A DNA MER1_type -110 79 1 2010 141 0 0 chr10 128240506 128240818 -17348470 - AluSx SINE Alu 0 312 1 501 309 24 24 chr10 128241073 128241238 -17348050 - MIR SINE MIR -65 197 33 21 36 0 0 chr10 128241475 128241503 -17347785 + AT_rich Low_complexity Low_complexity 1 28 0 250 265 0 96 chr10 128242143 128242183 -17347105 - MIR SINE MIR -144 118 88 1228 205 50 57 chr10 128242183 128242320 -17346968 + AluJo SINE Alu 1 137 -165 2156 103 0 3 chr10 128242320 128242621 -17346667 + AluSx SINE Alu 5 304 -8 1228 205 50 57 chr10 128242621 128242780 -17346508 + AluJo SINE Alu 137 295 -7 250 265 0 96 chr10 128242780 128242822 -17346466 - MIR SINE MIR -174 88 44 429 239 120 42 chr10 128243443 128243610 -17345678 + MIR3 SINE MIR 18 197 -11 365 286 238 11 chr10 128243744 128243929 -17345359 + MIR SINE MIR 23 249 -13 273 230 81 0 chr10 128244329 128244403 -17344885 - MIR SINE MIR -16 246 167 12598 145 20 21 chr10 128244553 128247249 -17342039 + L1MA4 LINE L1 3070 5777 -523 1952 84 4 0 chr10 128247249 128247511 -17341777 + L1PA11 LINE L1 5912 6174 0 12598 145 20 21 chr10 128247511 128247789 -17341499 + L1MA4 LINE L1 5777 6054 -246 6897 85 38 27 chr10 128247786 128248801 -17340487 + L1MA2 LINE L1 5182 6212 -92 * 2294 74 0 7 chr10 128248801 128249100 -17340188 - AluSg SINE Alu -13 297 1 6897 85 38 27 chr10 128249100 128249195 -17340093 + L1MA2 LINE L1 6212 6304 0 892 183 143 9 chr10 128249212 128249364 -17339924 + L1MA4 LINE L1 6036 6231 -69 2094 122 0 0 chr10 128249364 128249658 -17339630 - AluSx SINE Alu -14 298 5 892 183 143 9 chr10 128249658 128249735 -17339553 + L1MA4 LINE L1 6231 6296 -4 2086 108 0 7 chr10 128249848 128250143 -17339145 + AluSx SINE Alu 1 293 -19 973 130 56 102 chr10 128250170 128250304 -17338984 + MER2 DNA MER2_type 1 123 -222 2362 78 0 0 chr10 128250304 128250612 -17338676 + AluY SINE Alu 1 308 -3 973 130 56 102 chr10 128250612 128250693 -17338595 + MER2 DNA MER2_type 123 206 -139 1529 180 7 20 chr10 128250727 128251032 -17338256 - AluJo SINE Alu -11 301 1 657 115 0 3 chr10 128251055 128251163 -17338125 + L1M2 LINE L1 5359 5464 -827 1842 105 4 0 chr10 128251560 128251817 -17337471 - AluSp SINE Alu -17 296 39 1790 136 30 33 chr10 128252176 128252478 -17336810 + AluSx SINE Alu 1 301 -11 1932 144 3 3 chr10 128252483 128252781 -17336507 + AluJb SINE Alu 1 298 -14 185 266 65 93 chr10 128252811 128252950 -17336338 - L2 LINE L2 -854 2460 2326 1999 106 0 3 chr10 128253066 128253348 -17335940 + AluSx SINE Alu 23 303 -9 313 245 80 11 chr10 128253360 128253457 -17335831 - MIR SINE MIR -68 140 38 490 207 121 7 chr10 128253666 128253806 -17335482 - MER117 DNA MER1_type -38 159 4 312 165 0 99 chr10 128255005 128255327 -17333961 + (CCTCG)n Simple_repeat Simple_repeat 1 290 0 183 329 35 24 chr10 128255596 128255681 -17333607 + L2 LINE L2 2490 2575 -739 1004 270 69 25 chr10 128256100 128256418 -17332870 - LTR16A LTR ERVL -39 411 80 352 100 0 0 chr10 128256552 128256602 -17332686 - MIR3 SINE MIR -49 159 110 730 296 28 24 chr10 128256643 128256890 -17332398 - MIR SINE MIR -3 259 12 214 189 0 0 chr10 128256956 128256993 -17332295 + (TATATG)n Simple_repeat Simple_repeat 4 40 0 21 0 0 0 chr10 128257061 128257082 -17332206 + AT_rich Low_complexity Low_complexity 1 21 0 295 289 0 13 chr10 128257651 128257727 -17331561 - L2 LINE L2 0 3272 3198 593 308 32 11 chr10 128257750 128257935 -17331353 - MER5A DNA MER1_type 0 189 1 270 0 0 0 chr10 128258201 128258231 -17331057 + (TG)n Simple_repeat Simple_repeat 2 31 0 21 57 0 0 chr10 128258292 128258327 -17330961 + AT_rich Low_complexity Low_complexity 1 35 0 222 208 0 0 chr10 128258571 128258619 -17330669 + GA-rich Low_complexity Low_complexity 3 50 0 185 301 204 26 chr10 128258699 128258812 -17330476 + MIR SINE MIR 79 211 -51 22 70 0 0 chr10 128259239 128259282 -17330006 + AT_rich Low_complexity Low_complexity 1 43 0 21 57 0 0 chr10 128261076 128261111 -17328177 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr10 128262788 128262811 -17326477 + GC_rich Low_complexity Low_complexity 1 23 0 183 42 0 0 chr10 128262868 128262892 -17326396 + (CGG)n Simple_repeat Simple_repeat 2 25 0 28 61 0 0 chr10 128265724 128265773 -17323515 + GC_rich Low_complexity Low_complexity 1 49 0 216 167 0 0 chr10 128266615 128266663 -17322625 + A-rich Low_complexity Low_complexity 1 48 0 2151 79 0 0 chr10 128270680 128270985 -17318303 - AluSc SINE Alu 0 305 1 1003 149 0 23 chr10 128270987 128271162 -17318126 - AluJb SINE Alu -4 308 138 468 269 74 34 chr10 128271193 128271368 -17317920 - MIR SINE MIR -61 201 20 1843 143 17 3 chr10 128271890 128272183 -17317105 + AluSg SINE Alu 1 297 -13 269 89 22 0 chr10 128272183 128272228 -17317060 + (GGA)n Simple_repeat Simple_repeat 1 46 0 330 132 40 0 chr10 128272482 128272558 -17316730 + CT-rich Low_complexity Low_complexity 1 79 0 204 40 0 0 chr10 128272558 128272583 -17316705 + (TG)n Simple_repeat Simple_repeat 2 26 0 584 215 31 55 chr10 128272912 128273075 -17316213 - MIR3 SINE MIR -13 195 37 493 303 118 57 chr10 128273913 128274141 -17315147 + MIR SINE MIR 19 260 -2 200 246 0 16 chr10 128274348 128274409 -17314879 - MIR SINE MIR -63 199 140 1131 276 124 12 chr10 128274409 128274904 -17314384 + MLT1G1 LTR MaLR 1 595 0 518 242 16 8 chr10 128274905 128275033 -17314255 - MIR SINE MIR -119 143 15 1867 123 3 44 chr10 128275207 128275681 -17313607 + AluSq SINE Alu 1 461 0 924 138 69 6 chr10 128276380 128276540 -17312748 - AluSq SINE Alu -10 303 134 2174 107 3 0 chr10 128276540 128276839 -17312449 - AluSx SINE Alu -7 305 6 228 35 0 0 chr10 128278270 128278299 -17310989 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1796 137 4 0 chr10 128278583 128278853 -17310435 - AluSx SINE Alu -41 271 1 354 343 50 17 chr10 128279219 128279400 -17309888 + MIR3 SINE MIR 20 206 -2 1919 95 113 164 chr10 128279809 128279875 -17309413 - MSTA LTR MaLR 0 428 360 2362 62 16 3 chr10 128279875 128280180 -17309108 + AluY SINE Alu 1 309 -2 1919 95 113 164 chr10 128280180 128280237 -17309051 - MSTA LTR MaLR -68 360 302 1777 145 47 0 chr10 128280237 128280533 -17308755 + AluSx SINE Alu 1 310 -2 1919 95 113 164 chr10 128280533 128280859 -17308429 - MSTA LTR MaLR -126 302 1 351 0 0 0 chr10 128280892 128280931 -17308357 + (TG)n Simple_repeat Simple_repeat 2 40 0 2214 102 0 0 chr10 128281001 128281296 -17307992 + AluSx SINE Alu 1 295 -17 242 253 25 63 chr10 128281810 128281889 -17307399 - MIR3 SINE MIR -19 189 114 749 224 0 7 chr10 128282883 128283030 -17306258 - MIR SINE MIR -44 218 73 2013 151 49 51 chr10 128283038 128283429 -17305859 - MLT1B LTR MaLR 0 390 1 339 277 45 99 chr10 128283447 128283550 -17305738 - L2 LINE L2 -1 3312 3224 2189 103 0 7 chr10 128283550 128283850 -17305438 - AluSx SINE Alu -14 298 1 339 277 45 99 chr10 128283850 128283948 -17305340 - L2 LINE L2 -89 3224 3122 724 301 117 2 chr10 128283977 128284315 -17304973 - L2 LINE L2 -318 2995 2619 215 250 58 0 chr10 128284317 128284369 -17304919 - L2 LINE L2 -1 3312 3258 1502 221 10 3 chr10 128284725 128285015 -17304273 + AluJo SINE Alu 1 292 -10 297 274 88 0 chr10 128285257 128285359 -17303929 - L2 LINE L2 -757 2557 2447 368 278 38 53 chr10 128285364 128285497 -17303791 + MIR3 SINE MIR 15 145 -63 2103 128 3 0 chr10 128285517 128285823 -17303465 + AluSx SINE Alu 1 307 -5 233 210 11 109 chr10 128286152 128286249 -17303039 - MIR SINE MIR -64 198 111 199 279 33 0 chr10 128286320 128286381 -17302907 + L2 LINE L2 3160 3222 -91 2501 87 3 0 chr10 128286909 128287218 -17302070 + AluSp SINE Alu 1 310 -3 402 284 70 45 chr10 128287826 128288027 -17301261 - MIR SINE MIR -51 211 6 315 0 0 0 chr10 128290133 128290168 -17299120 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 180 0 0 0 chr10 128294207 128294227 -17295061 + (TG)n Simple_repeat Simple_repeat 2 21 0 469 220 40 0 chr10 128296336 128296436 -17292852 + MIR SINE MIR 31 134 -128 725 250 60 30 chr10 128296820 128297052 -17292236 - MIR SINE MIR -16 246 8 204 125 21 42 chr10 128298326 128298374 -17290914 + (CACCC)n Simple_repeat Simple_repeat 5 51 0 276 256 111 34 chr10 128298630 128298747 -17290541 - MIR SINE MIR -76 186 61 234 314 50 0 chr10 128299216 128299337 -17289951 - L1MC5 LINE L1 -181 7780 7654 337 242 168 89 chr10 128299445 128299635 -17289653 + MIR SINE MIR 31 235 -27 308 310 25 57 chr10 128300162 128300320 -17288968 + L2 LINE L2 3117 3269 -44 365 263 129 110 chr10 128301331 128301586 -17287702 - L2 LINE L2 -13 3259 3000 1630 123 21 0 chr10 128302482 128302718 -17286570 - AluSx SINE Alu -8 304 64 1980 110 48 24 chr10 128303311 128303602 -17285686 - AluSx SINE Alu -14 298 1 365 265 147 29 chr10 128305367 128305537 -17283751 + MIR3 SINE MIR 4 193 -15 2661 184 24 38 chr10 128306152 128306284 -17283004 - L1MB5 LINE L1 0 6174 6042 2304 90 0 7 chr10 128306284 128306573 -17282715 - AluSp SINE Alu -26 287 1 2661 184 24 38 chr10 128306573 128307016 -17282272 - L1MB5 LINE L1 -132 6042 5607 1604 123 43 20 chr10 128307018 128307271 -17282017 - AluSx SINE Alu -53 259 1 1565 188 30 4 chr10 128307355 128307720 -17281568 - MSTB LTR MaLR -4 422 1 243 224 0 0 chr10 128307930 128307979 -17281309 - MLT1I LTR MaLR -281 128 80 568 134 21 10 chr10 128307994 128308091 -17281197 + MER4A LTR ERV1 1 98 -566 1559 126 22 73 chr10 128308091 128308455 -17280833 + MER4A LTR ERV1 261 664 0 2290 87 31 0 chr10 128309222 128309343 -17279945 + AluSx SINE Alu 2 118 -194 228 35 0 0 chr10 128309343 128309372 -17279916 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2290 87 31 0 chr10 128309372 128309536 -17279752 + AluSx SINE Alu 118 296 -16 765 257 140 10 chr10 128309677 128309969 -17279319 - L1MEc LINE L1 -6027 369 40 4250 121 30 53 chr10 128310043 128310730 -17278558 - L1MC1 LINE L1 0 6333 5664 1961 156 0 0 chr10 128310730 128311012 -17278276 + AluSx SINE Alu 2 283 -29 4250 121 30 53 chr10 128311012 128311094 -17278194 - L1MC1 LINE L1 -669 5664 5582 1928 145 0 14 chr10 128311094 128311377 -17277911 + AluSx SINE Alu 1 279 -33 282 56 0 0 chr10 128311377 128311413 -17277875 + (CA)n Simple_repeat Simple_repeat 1 36 0 322 125 0 18 chr10 128311413 128311469 -17277819 - L1MC/D LINE L1 -697 5636 5582 2385 116 0 0 chr10 128311469 128311780 -17277508 + AluSx SINE Alu 1 311 -1 252 0 0 0 chr10 128311944 128311972 -17277316 + (TA)n Simple_repeat Simple_repeat 2 29 0 2590 221 7 27 chr10 128312007 128312567 -17276721 - MLT2B3 LTR ERVL -5 549 1 237 254 74 41 chr10 128312567 128312689 -17276599 - MLT1J LTR MaLR -52 459 334 895 185 37 6 chr10 128312703 128312865 -17276423 + MER5A DNA MER1_type 1 167 -22 257 245 20 75 chr10 128312984 128313131 -17276157 - MLT1J1 LTR MaLR -295 151 13 229 206 0 95 chr10 128313625 128313688 -17275600 + MIR SINE MIR 105 161 -101 373 261 54 0 chr10 128314258 128314350 -17274938 + MIR SINE MIR 162 258 -4 476 248 23 16 chr10 128314610 128314754 -17274534 - MIR SINE MIR -66 142 30 2387 90 3 0 chr10 128315127 128315426 -17273862 - AluY SINE Alu -11 300 1 3547 119 46 0 chr10 128315479 128315983 -17273305 + MER1A DNA MER1_type 1 527 0 664 167 52 57 chr10 128316226 128316385 -17272903 + MIR SINE MIR 49 214 -48 284 266 21 32 chr10 128316457 128316551 -17272737 + MER5B DNA MER1_type 1 93 -85 438 285 6 47 chr10 128316798 128316970 -17272318 + L2 LINE L2 2921 3085 -228 713 248 111 22 chr10 128316973 128317253 -17272035 + MLT1J LTR MaLR 5 278 -168 331 357 0 0 chr10 128317540 128317624 -17271664 + L2 LINE L2 3134 3217 -55 466 235 141 7 chr10 128317626 128317775 -17271513 + HsTC2 DNA Tc2 44 212 -1686 * 759 248 21 33 chr10 128317770 128318012 -17271276 + HsTC2 DNA Tc2 501 739 -1159 537 277 23 17 chr10 128318016 128318193 -17271095 + HsTC2 DNA Tc2 1284 1637 -261 2196 134 0 6 chr10 128318971 128319285 -17270003 + AluSx SINE Alu 1 312 0 281 301 59 47 chr10 128319299 128319535 -17269753 + L1MCc LINE L1 1284 1522 -4901 1623 145 12 0 chr10 128319561 128319810 -17269478 + AluSq SINE Alu 58 309 -4 1330 165 19 148 chr10 128319832 128320081 -17269207 + L1MC/D LINE L1 5134 5288 -1047 2508 74 0 0 chr10 128320081 128320379 -17268909 + AluY SINE Alu 1 298 -13 1330 165 19 148 chr10 128320379 128320650 -17268638 + L1MC/D LINE L1 5288 5592 -743 880 94 281 12 chr10 128320655 128320826 -17268462 - AluSg/x SINE Alu 0 309 93 1852 106 0 0 chr10 128320828 128321063 -17268225 - AluSq SINE Alu -78 235 1 606 49 0 0 chr10 128321491 128321573 -17267715 + (GA)n Simple_repeat Simple_repeat 2 83 0 2236 67 63 7 chr10 128322302 128322587 -17266701 - AluY SINE Alu -10 301 1 1813 162 0 58 chr10 128322592 128322919 -17266369 - AluSx SINE Alu -4 308 1 1998 242 32 19 chr10 128322991 128323581 -17265707 + L1M4 LINE L1 4505 5102 -1044 469 303 26 50 chr10 128323754 128323941 -17265347 + ERVL LTR ERVL 4505 4557 -439 2458 102 27 21 chr10 128323941 128324314 -17264974 + THE1C LTR MaLR 1 375 0 469 303 26 50 chr10 128324314 128324451 -17264837 + ERVL LTR ERVL 4557 4696 -300 424 313 153 57 chr10 128324703 128324933 -17264355 - HERV16 LTR ERVL -4688 308 45 1991 155 0 3 chr10 128324933 128325229 -17264059 - AluSx SINE Alu -17 295 1 424 313 153 57 chr10 128325229 128325279 -17264009 - HERV16 LTR ERVL -4951 45 1 403 314 77 14 chr10 128325283 128325554 -17263734 - LTR16B LTR ERVL -8 450 151 358 230 103 0 chr10 128327406 128327493 -17261795 + MIR SINE MIR 88 183 -79 415 298 18 58 chr10 128328473 128328603 -17260685 + MER5A DNA MER1_type 21 144 -45 1909 157 10 13 chr10 128328603 128328909 -17260379 + AluJb SINE Alu 1 305 -7 415 298 18 58 chr10 128328909 128328949 -17260339 + MER5A DNA MER1_type 144 184 -5 676 288 27 18 chr10 128329024 128329246 -17260042 - MIR SINE MIR -38 224 1 374 280 28 9 chr10 128329252 128329359 -17259929 - MIR SINE MIR -74 134 26 2226 134 0 0 chr10 128329645 128329944 -17259344 - AluSx SINE Alu -12 300 2 2105 127 0 22 chr10 128330093 128330407 -17258881 + AluSc SINE Alu 1 307 -2 206 118 0 29 chr10 128330947 128330981 -17258307 + (TCCC)n Simple_repeat Simple_repeat 3 35 0 390 234 85 0 chr10 128331034 128331128 -17258160 - MIR SINE MIR -22 240 139 196 236 0 42 chr10 128331310 128331382 -17257906 - L2 LINE L2 -420 2894 2826 321 296 35 0 chr10 128331898 128332013 -17257275 - MLT1L LTR MaLR -1 614 496 228 151 57 38 chr10 128332323 128332376 -17256912 - MLT1L LTR MaLR -561 54 1 2100 107 52 3 chr10 128332454 128332744 -17256544 - AluSx SINE Alu -8 304 1 260 245 128 59 chr10 128332818 128332920 -17256368 - MIR SINE MIR -21 241 133 2137 130 10 16 chr10 128333096 128333404 -17255884 - AluSx SINE Alu -6 306 1 1005 126 14 0 chr10 128333404 128333547 -17255741 - AluSq/x SINE Alu -168 145 1 1729 133 70 37 chr10 128333568 128333868 -17255420 + AluJb SINE Alu 3 312 0 997 175 18 37 chr10 128333887 128334104 -17255184 - MER20 DNA MER1_type 0 219 7 955 202 22 22 chr10 128334115 128334298 -17254990 + MER5A DNA MER1_type 1 183 -6 631 289 38 0 chr10 128334303 128334462 -17254826 + MER5B DNA MER1_type 14 178 0 248 297 214 30 chr10 128335115 128335343 -17253945 + L2 LINE L2 2477 2662 -652 2086 132 0 14 chr10 128335343 128335639 -17253649 + AluSx SINE Alu 9 300 -12 1809 207 85 43 chr10 128335647 128336130 -17253158 - MLT1D LTR MaLR -2 503 1 248 297 214 30 chr10 128336130 128336256 -17253032 + L2 LINE L2 2667 2907 -407 423 260 72 77 chr10 128336259 128336440 -17252848 - MER91A DNA MER1_type -2 194 15 206 258 212 30 chr10 128336466 128336598 -17252690 + L2 LINE L2 2921 3076 -196 2194 134 0 0 chr10 128336598 128336896 -17252392 - AluSx SINE Alu -14 298 1 186 380 170 0 chr10 128337005 128337105 -17252183 + L2 LINE L2 3134 3250 -22 186 118 0 0 chr10 128337106 128337140 -17252148 + (TGAA)n Simple_repeat Simple_repeat 1 34 0 343 317 35 4 chr10 128337691 128337841 -17251447 + MIR SINE MIR 13 164 -71 378 230 220 47 chr10 128337910 128338101 -17251187 - MIR SINE MIR -7 255 32 2211 128 0 0 chr10 128338311 128338608 -17250680 - AluSq SINE Alu -16 297 1 5569 220 32 17 chr10 128340349 128342517 -17246771 + L1M3f LINE L1 14 2217 -4066 1462 214 78 24 chr10 128342806 128343176 -17246112 + LTR16C LTR ERVL 85 474 -17 2241 116 17 3 chr10 128343280 128343581 -17245707 - AluSx SINE Alu -7 305 1 229 167 0 21 chr10 128344104 128344152 -17245136 - L2 LINE L2 -1 3271 3225 427 308 47 29 chr10 128344472 128344546 -17244742 - MER5B DNA MER1_type 0 178 107 1179 207 10 91 chr10 128344546 128344952 -17244336 - MLT1A2 LTR MaLR -1 373 1 427 308 47 29 chr10 128344952 128345049 -17244239 - MER5B DNA MER1_type -71 107 4 221 290 0 60 chr10 128346002 128346102 -17243186 - MIR SINE MIR -104 158 65 185 272 43 33 chr10 128347314 128347406 -17241882 + L2 LINE L2 3180 3272 0 334 306 65 0 chr10 128347713 128347821 -17241467 + MER69 DNA AcHobo 9 123 -2403 * 615 179 98 29 chr10 128347806 128347979 -17241309 + MER69 DNA AcHobo 2342 2526 0 660 158 176 118 chr10 128348152 128348431 -17240857 - MER51C LTR ERV1 0 640 346 362 211 0 0 chr10 128348881 128348957 -17240331 + MIR SINE MIR 152 227 -35 2391 77 0 29 chr10 128348985 128349295 -17239993 + AluY SINE Alu 1 301 -10 1856 149 37 3 chr10 128349318 128349613 -17239675 - AluJo SINE Alu -7 305 1 1013 104 0 8 chr10 128349615 128349749 -17239539 - AluJo/FLAM SINE Alu -179 133 1 1792 158 86 3 chr10 128350196 128350532 -17238756 + THE1B LTR MaLR 1 364 0 226 266 13 38 chr10 128350796 128350875 -17238413 - MER5B DNA MER1_type -73 105 29 338 292 18 35 chr10 128351576 128351689 -17237599 - L2 LINE L2 -4 3309 3199 410 239 94 0 chr10 128353502 128353619 -17235669 + L2 LINE L2 3144 3271 -1 398 266 186 27 chr10 128353809 128353997 -17235291 - MIR SINE MIR -26 236 19 2312 115 0 0 chr10 128354164 128354459 -17234829 + AluSx SINE Alu 1 295 -17 201 355 65 9 chr10 128354506 128354613 -17234675 + L2 LINE L2 3191 3303 -10 777 241 46 13 chr10 128355078 128355413 -17233875 - MER31B LTR ERV1 0 466 1 1211 193 137 28 chr10 128355473 128355830 -17233458 + MSTD LTR MaLR 1 396 0 762 199 0 0 chr10 128356012 128356143 -17233145 - FLAM_A SINE Alu -2 131 1 21 36 0 0 chr10 128357008 128357036 -17232252 + AT_rich Low_complexity Low_complexity 1 28 0 1505 208 28 14 chr10 128357354 128357710 -17231578 - MLT1A1 LTR MaLR 0 365 5 871 172 3 14 chr10 128357789 128358150 -17231138 + CT-rich Low_complexity Low_complexity 1 356 0 240 200 0 0 chr10 128358171 128358226 -17231062 + CT-rich Low_complexity Low_complexity 3 57 0 332 220 27 65 chr10 128358228 128358339 -17230949 - MLT2B3 LTR ERVL -223 297 200 1652 161 19 0 chr10 128358339 128358599 -17230689 - AluJo SINE Alu -22 290 26 843 208 40 5 chr10 128358870 128359072 -17230216 - MLT2B3 LTR ERVL -345 209 1 912 148 0 0 chr10 128359519 128359647 -17229641 + AluSc SINE Alu 167 294 -15 2275 103 19 27 chr10 128359659 128360026 -17229262 + THE1B LTR MaLR 1 364 0 323 298 30 23 chr10 128360756 128360887 -17228401 + MIR3 SINE MIR 51 182 -26 630 177 0 0 chr10 128361005 128361118 -17228170 + AluJb SINE Alu 200 312 0 259 292 161 47 chr10 128362238 128362474 -17226814 - L2 LINE L2 -19 3294 3032 275 221 112 91 chr10 128362547 128362823 -17226465 - L2 LINE L2 -215 3098 2817 181 361 57 46 chr10 128362945 128363208 -17226080 - L2 LINE L2 -449 2865 2600 1568 274 36 20 chr10 128363672 128364645 -17224643 - L1MEc LINE L1 -3426 2789 1845 258 32 0 0 chr10 128365496 128365527 -17223761 + (GA)n Simple_repeat Simple_repeat 2 32 0 204 40 0 0 chr10 128366037 128366062 -17223226 + (GA)n Simple_repeat Simple_repeat 2 26 0 496 371 34 7 chr10 128366065 128366359 -17222929 - L1ME LINE L1 -536 5626 5325 237 358 33 0 chr10 128366674 128366794 -17222494 - MIR SINE MIR -70 192 69 329 282 62 70 chr10 128367367 128367594 -17221694 + Charlie2 DNA MER1_type 98 322 -2460 1004 232 91 47 chr10 128367623 128367802 -17221486 + Charlie2 DNA MER1_type 2230 2400 -462 1816 161 14 4 chr10 128367802 128368081 -17221207 - AluJo SINE Alu -25 287 6 1310 114 0 31 chr10 128368086 128368313 -17220975 - L1PA16 LINE L1 -1 6165 5946 1004 232 91 47 chr10 128368313 128368718 -17220570 + Charlie2 DNA MER1_type 2403 2846 -16 363 215 86 21 chr10 128368883 128368976 -17220312 + L2 LINE L2 3213 3311 -2 663 251 88 4 chr10 128368980 128369207 -17220081 - MIR SINE MIR -8 254 9 33 43 0 0 chr10 128370574 128370621 -17218667 + GC_rich Low_complexity Low_complexity 1 47 0 2237 126 3 0 chr10 128372289 128372599 -17216689 - AluSx SINE Alu -1 311 1 2185 135 0 0 chr10 128373141 128373453 -17215835 - AluSx SINE Alu 0 312 1 252 0 0 0 chr10 128423946 128423974 -17165314 + (C)n Simple_repeat Simple_repeat 1 28 0 246 220 51 0 chr10 128424284 128424343 -17164945 + MIR SINE MIR 86 147 -61 276 53 0 0 chr10 128424753 128424791 -17164497 + (GTTTG)n Simple_repeat Simple_repeat 2 39 0 284 237 10 103 chr10 128425113 128425210 -17164078 - MIR SINE MIR -66 196 109 2013 112 0 7 chr10 128425592 128425877 -17163411 + AluSx SINE Alu 1 283 -29 252 0 0 0 chr10 128426700 128426728 -17162560 + (TTA)n Simple_repeat Simple_repeat 1 28 0 2246 97 0 16 chr10 128428755 128429066 -17160222 + AluSx SINE Alu 1 306 -6 2092 170 15 0 chr10 128429157 128429498 -17159790 - MER7A DNA MER2_type -1 345 2 2631 179 14 33 chr10 128429800 128430375 -17158913 - L1P LINE L1 -3570 2576 2013 760 206 27 22 chr10 128430373 128430557 -17158731 + L1 LINE L1 4468 4652 -1494 * 876 142 0 0 chr10 128431306 128431433 -17157855 + FLAM_C SINE Alu 1 127 -16 28 0 0 0 chr10 128431439 128431467 -17157821 + AT_rich Low_complexity Low_complexity 1 28 0 880 130 0 0 chr10 128431703 128431834 -17157454 + AluJb SINE Alu 1 131 -181 2866 78 18 8 chr10 128432441 128432826 -17156462 + L1PA7 LINE L1 5764 6152 -2 790 272 62 12 chr10 128432836 128433160 -17156128 - L1MC4 LINE L1 -260 7782 7443 311 180 0 0 chr10 128433792 128433842 -17155446 + 5S rRNA rRNA 2 51 -70 2500 166 15 14 chr10 128433916 128434434 -17154854 + L1MA5A LINE L1 5779 6297 0 957 252 45 36 chr10 128435263 128435596 -17153692 - L1ME3A LINE L1 0 6170 5835 928 207 0 32 chr10 128435759 128435947 -17153341 - MER5A DNA MER1_type -7 182 1 392 300 17 0 chr10 128436928 128437048 -17152240 - L2 LINE L2 -2 3311 3190 288 313 2 24 chr10 128437048 128437142 -17152146 - L2 LINE L2 -331 2982 2890 724 338 71 6 chr10 128437225 128437565 -17151723 - L2 LINE L2 -603 2711 2350 1388 122 37 0 chr10 128437566 128437780 -17151508 + AluSq SINE Alu 77 298 -15 184 292 42 0 chr10 128438817 128438865 -17150423 + MER5A DNA MER1_type 11 60 -129 359 311 82 30 chr10 128439325 128439592 -17149696 + MARNA DNA Mariner 175 455 -131 536 279 108 30 chr10 128439832 128440101 -17149187 - L2 LINE L2 -52 3261 2972 1718 124 6 68 chr10 128440166 128440488 -17148800 - AluSx SINE Alu -10 302 1 22 0 0 0 chr10 128440611 128440633 -17148655 + AT_rich Low_complexity Low_complexity 1 22 0 22 56 0 0 chr10 128441718 128441754 -17147534 + AT_rich Low_complexity Low_complexity 1 36 0 1605 52 0 14 chr10 128442520 128442805 -17146483 + L1P1 LINE L1 5187 5468 -687 884 318 90 5 chr10 128443139 128443646 -17145642 + L2 LINE L2 2709 3253 -60 785 238 31 72 chr10 128445502 128445821 -17143467 - MLT1F1 LTR MaLR -255 312 7 1664 167 3 7 chr10 128446325 128446625 -17142663 + AluJo SINE Alu 1 299 -13 637 206 14 20 chr10 128447029 128447175 -17142113 - MLT1H1 LTR MaLR -85 470 326 234 240 0 80 chr10 128447202 128447277 -17142011 - MLT1G LTR MaLR -284 311 243 293 248 119 30 chr10 128447434 128447535 -17141753 - MLT1G LTR MaLR -462 128 19 1593 202 3 0 chr10 128447757 128448039 -17141249 - MLT1C LTR MaLR -184 283 1 264 125 0 0 chr10 128448558 128448598 -17140690 - MSTA LTR MaLR 0 428 389 243 179 0 36 chr10 128448605 128448661 -17140627 + AluJ/FLAM SINE Alu 9 62 -240 2243 128 27 35 chr10 128449165 128449532 -17139756 + THE1B LTR MaLR 1 364 0 786 238 33 28 chr10 128449618 128449799 -17139489 + MER5A DNA MER1_type 2 183 -6 251 258 65 0 chr10 128449875 128449937 -17139351 + MER5A DNA MER1_type 118 183 -6 267 312 0 0 chr10 128450546 128450623 -17138665 - MIR SINE MIR -88 174 98 1808 159 0 17 chr10 128450628 128450917 -17138371 + AluSx SINE Alu 5 288 -24 28 0 0 0 chr10 128450984 128451012 -17138276 + AT_rich Low_complexity Low_complexity 1 28 0 241 307 17 45 chr10 128451559 128451801 -17137487 + G-rich Low_complexity Low_complexity 1 235 0 208 306 6 50 chr10 128451757 128451937 -17137351 + GA-rich Low_complexity Low_complexity 3 174 0 * 292 255 12 34 chr10 128454047 128454156 -17135132 + MIR SINE MIR 79 144 -64 1381 80 54 92 chr10 128454164 128454403 -17134885 + MER30 DNA MER1_type 1 230 0 317 198 113 130 chr10 128454651 128454828 -17134460 + MER5B DNA MER1_type 1 174 -4 2417 73 0 0 chr10 128455041 128455343 -17133945 - AluY SINE Alu -9 302 1 2249 100 0 0 chr10 128455343 128455641 -17133647 - AluSq SINE Alu -14 299 1 189 282 103 0 chr10 128455853 128455931 -17133357 - L2 LINE L2 -273 2999 2914 2131 160 108 12 chr10 128456045 128456469 -17132819 - MLT1C LTR MaLR -2 465 1 1631 162 35 109 chr10 128456478 128456872 -17132416 + MLT1A1 LTR MaLR 1 365 0 383 308 66 25 chr10 128456976 128457174 -17132114 + L2 LINE L2 3107 3312 -1 1630 180 3 3 chr10 128457341 128457636 -17131652 + AluJb SINE Alu 1 295 -17 316 266 112 35 chr10 128458111 128458254 -17131034 + MIR3 SINE MIR 15 168 -40 338 241 15 90 chr10 128458643 128458776 -17130512 - L3 LINE CR1 -107 1470 1348 655 258 48 5 chr10 128459294 128459480 -17129808 - LTR33 LTR ERVL -314 207 14 699 101 9 37 chr10 128459512 128459667 -17129621 - FLAM_A SINE Alu 0 142 18 411 304 225 10 chr10 128459709 128460188 -17129100 - L2 LINE L2 -1 3312 2744 1917 112 43 16 chr10 128460410 128460714 -17128574 - AluSx SINE Alu 0 312 1 2012 192 42 32 chr10 128460914 128461387 -17127901 + L1ME3 LINE L1 5506 5983 -179 1982 96 11 4 chr10 128461430 128461710 -17127578 - AluY SINE Alu -14 297 16 2319 75 0 13 chr10 128461727 128462033 -17127255 - AluY SINE Alu -9 302 1 2265 93 0 0 chr10 128462273 128462573 -17126715 - AluY SINE Alu -11 300 1 21 0 0 0 chr10 128463595 128463616 -17125672 + AT_rich Low_complexity Low_complexity 1 21 0 733 239 112 15 chr10 128464953 128465158 -17124130 + MIR SINE MIR 37 261 -1 633 51 13 0 chr10 128465676 128465754 -17123534 - MADE1 DNA Mariner 0 80 2 368 250 33 0 chr10 128465789 128465881 -17123407 + MER5A DNA MER1_type 50 144 -45 2010 189 47 51 chr10 128467186 128467277 -17122011 - Charlie4a DNA MER1_type -1453 508 418 2142 90 37 0 chr10 128467277 128467577 -17121711 - AluY SINE Alu 0 311 1 2010 189 47 51 chr10 128467577 128467994 -17121294 - Charlie4a DNA MER1_type -1543 418 2 765 204 7 0 chr10 128468583 128468725 -17120563 + MER3 DNA MER1_type 1 143 -66 273 369 25 0 chr10 128468773 128468895 -17120393 + MIR SINE MIR 60 184 -78 2437 128 12 2 chr10 128470243 128470981 -17118307 + AluY SINE Alu 1 311 0 277 158 0 53 chr10 128471135 128471192 -17118096 + L2 LINE L2 3218 3271 -1 338 274 0 0 chr10 128471405 128471478 -17117810 - MIR SINE MIR -82 180 108 180 0 0 0 chr10 128472726 128472746 -17116542 + (ATG)n Simple_repeat Simple_repeat 1 20 0 598 283 88 9 chr10 128472750 128472976 -17116312 - MIR SINE MIR -12 250 7 318 310 0 0 chr10 128473634 128473721 -17115567 - MIR SINE MIR -78 184 98 1823 144 14 0 chr10 128473726 128474004 -17115284 + AluSx SINE Alu 5 286 -26 242 358 65 16 chr10 128474567 128474690 -17114598 + L2 LINE L2 3136 3264 -8 225 119 0 0 chr10 128475792 128475834 -17113454 + LTR66 LTR ERVL 398 439 -171 357 270 0 22 chr10 128475836 128475925 -17113363 + L1MC4 LINE L1 6614 6700 -1342 328 258 21 43 chr10 128475868 128475961 -17113327 - L1MC4 LINE L1 -1340 6702 6612 * 323 259 99 0 chr10 128475999 128476080 -17113208 + L1MC4 LINE L1 6614 6702 -1340 * 334 286 0 22 chr10 128476018 128476109 -17113179 - L1MC4 LINE L1 -1339 6703 6615 229 239 23 11 chr10 128476126 128476214 -17113074 + L1MC4 LINE L1 6615 6703 -1339 232 176 68 54 chr10 128476255 128476329 -17112959 - L1MC4 LINE L1 -1342 6700 6626 490 147 12 60 chr10 128476329 128476596 -17112692 + CT-rich Low_complexity Low_complexity 1 254 0 301 202 0 17 chr10 128476607 128476726 -17112562 + CT-rich Low_complexity Low_complexity 1 117 0 272 157 78 0 chr10 128476744 128476795 -17112493 + Charlie8 DNA MER1_type 1353 1407 -1010 777 254 121 94 chr10 128477346 128478015 -17111273 - L1MC4 LINE L1 -2 8040 7354 391 265 8 0 chr10 128478619 128478862 -17110426 + (TGGA)n Simple_repeat Simple_repeat 1 245 0 225 250 70 60 chr10 128479224 128479324 -17109964 - MLT1K LTR MaLR -357 231 131 538 265 91 13 chr10 128479648 128479878 -17109410 + L1MC/D LINE L1 5573 5820 -1988 1033 217 80 20 chr10 128479966 128480215 -17109073 - MLT1A1 LTR MaLR 0 365 102 476 213 37 19 chr10 128480741 128480849 -17108439 - MIR3 SINE MIR 0 208 99 7876 170 31 14 chr10 128480915 128481967 -17107321 - L1PB4 LINE L1 0 6156 5123 1871 102 0 8 chr10 128481967 128482232 -17107056 - AluSq SINE Alu -2 311 49 7876 170 31 14 chr10 128482232 128483626 -17105662 - L1PB4 LINE L1 -1033 5123 3686 246 315 43 22 chr10 128483731 128483823 -17105465 + L2 LINE L2 3179 3272 0 189 262 0 0 chr10 128484519 128484580 -17104708 + (TCTA)n Simple_repeat Simple_repeat 3 63 0 314 349 7 7 chr10 128484587 128484736 -17104552 + (TCCA)n Simple_repeat Simple_repeat 3 151 0 207 312 47 4 chr10 128485112 128485233 -17104055 - MIR SINE MIR -7 201 77 1254 198 42 37 chr10 128485400 128485737 -17103551 - Tigger7 DNA MER2_type 0 2491 2 236 218 0 77 chr10 128485751 128485829 -17103459 - MIR3 SINE MIR -136 72 1 3515 150 43 11 chr10 128486184 128486817 -17102471 - L1MB8 LINE L1 -1 6177 5525 22 0 0 0 chr10 128487720 128487742 -17101546 + AT_rich Low_complexity Low_complexity 1 22 0 418 260 39 13 chr10 128487927 128488081 -17101207 - L1MC4a LINE L1 -1872 5936 5779 644 213 153 33 chr10 128488191 128488258 -17101030 - L1MC4a LINE L1 -2212 5596 5538 306 234 26 0 chr10 128488258 128488335 -17100953 - MER116 DNA Mariner -1 79 1 644 213 153 33 chr10 128488335 128488568 -17100720 - L1MC4a LINE L1 -2270 5538 5260 2067 95 43 20 chr10 128489390 128489694 -17099594 - AluSx SINE Alu -1 311 1 236 250 19 0 chr10 128489790 128489842 -17099446 - MER5B DNA MER1_type -1 177 125 729 167 0 0 chr10 128489844 128489964 -17099324 + FLAM_A SINE Alu 21 140 -2 351 223 204 0 chr10 128489973 128490076 -17099212 + MER5B DNA MER1_type 53 176 -2 483 293 70 37 chr10 128490138 128490380 -17098908 + MIR SINE MIR 1 250 -12 1771 126 15 19 chr10 128490387 128490658 -17098630 + AluSx SINE Alu 39 308 -4 316 262 89 6 chr10 128490785 128490948 -17098340 + L1MC/D LINE L1 5294 5471 -687 16176 216 29 18 chr10 128491163 128495020 -17094268 - L1PA16 LINE L1 -97 6720 2774 2380 81 0 3 chr10 128495020 128495317 -17093971 - AluSg SINE Alu -4 306 11 16176 216 29 18 chr10 128495317 128496786 -17092502 - L1PA16 LINE L1 -4043 2774 1323 1642 305 40 10 chr10 128496901 128497422 -17091866 - L1PA16 LINE L1 -6250 537 1 2121 105 0 4 chr10 128499159 128499476 -17089812 + AluSq SINE Alu 9 324 0 1320 182 16 67 chr10 128499559 128499759 -17089529 + MER58B DNA MER1_type 42 222 -2198 333 0 0 0 chr10 128499759 128499796 -17089492 + (TG)n Simple_repeat Simple_repeat 2 38 0 1320 182 16 67 chr10 128499796 128499908 -17089380 + MER58B DNA MER1_type 222 338 -3 429 316 35 11 chr10 128500999 128501173 -17088115 - MIR SINE MIR -49 213 36 654 248 7 0 chr10 128501352 128501493 -17087795 + MIR SINE MIR 9 150 -112 266 303 0 34 chr10 128501664 128501753 -17087535 + MIR SINE MIR 34 118 -101 246 253 0 174 chr10 128501867 128502045 -17087243 - MIR SINE MIR -79 183 37 2569 60 3 0 chr10 128502209 128502510 -17086778 + AluY SINE Alu 1 302 -9 2187 115 0 19 chr10 128503411 128503723 -17085565 - AluSx SINE Alu -6 306 1 305 246 127 28 chr10 128503791 128503933 -17085355 - L1ME4a LINE L1 0 6121 5966 1608 223 77 32 chr10 128504193 128504663 -17084625 - Charlie4a DNA MER1_type 0 508 18 1400 230 102 19 chr10 128504863 128505041 -17084247 + MLT1C LTR MaLR 1 163 -304 2507 80 0 0 chr10 128505041 128505343 -17083945 + AluY SINE Alu 1 302 -9 1400 230 102 19 chr10 128505343 128505595 -17083693 + MLT1C LTR MaLR 163 467 0 183 194 0 0 chr10 128506556 128506592 -17082696 - MIR SINE MIR -56 152 117 2318 97 0 28 chr10 128507252 128507573 -17081715 + AluSx SINE Alu 1 312 0 297 288 151 33 chr10 128508993 128509085 -17080203 - MIR SINE MIR -11 251 171 1507 221 52 47 chr10 128509085 128509550 -17079738 + MLT1C LTR MaLR 1 467 0 297 288 151 33 chr10 128509550 128509669 -17079619 - MIR SINE MIR -91 171 15 296 150 30 181 chr10 128509848 128509981 -17079307 - MER81 DNA DNA 0 114 2 360 172 33 19 chr10 128510949 128511053 -17078235 + MER20 DNA MER1_type 26 165 -54 339 65 0 0 chr10 128511060 128511106 -17078182 + (CA)n Simple_repeat Simple_repeat 1 46 0 246 227 93 0 chr10 128511594 128511669 -17077619 - MIR SINE MIR -42 220 139 401 266 0 9 chr10 128511737 128511850 -17077438 - MIR SINE MIR -70 192 81 183 348 0 14 chr10 128516377 128516446 -17072842 + MIR SINE MIR 39 106 -102 266 182 68 83 chr10 128518576 128518708 -17070580 + Tigger1 DNA MER2_type 359 488 -1930 7805 123 43 3 chr10 128518802 128520019 -17069269 + Tigger1 DNA MER2_type 538 1802 -616 874 99 146 13 chr10 128520288 128520439 -17068849 - Tigger4(Zombi) DNA MER2_type -29 2702 2532 621 140 159 0 chr10 128520443 128520550 -17068738 - Tigger4(Zombi) DNA MER2_type -2607 124 1 241 356 20 13 chr10 128520715 128520864 -17068424 + MIR SINE MIR 58 207 -55 3046 255 34 17 chr10 128521846 128522920 -17066368 - L1P LINE L1 -2742 3404 2313 2135 128 0 0 chr10 128523466 128523754 -17065534 - AluSx SINE Alu -24 288 1 677 253 124 0 chr10 128523840 128524026 -17065262 - MER3 DNA MER1_type 0 209 1 206 241 114 0 chr10 128524118 128524197 -17065091 + L2 LINE L2 3157 3244 -28 504 225 24 0 chr10 128524264 128524433 -17064855 + (CATATA)n Simple_repeat Simple_repeat 4 176 0 414 250 0 0 chr10 128524488 128524640 -17064648 + (CATA)n Simple_repeat Simple_repeat 4 155 0 294 266 204 0 chr10 128524816 128524929 -17064359 + L2 LINE L2 3137 3272 0 2512 50 0 13 chr10 128525046 128525348 -17063940 + AluY SINE Alu 1 298 -13 559 187 41 9 chr10 128525353 128525503 -17063785 + L1ME1 LINE L1 6035 6332 -2 265 279 12 23 chr10 128526358 128526444 -17062844 + MIR3 SINE MIR 94 178 -30 369 207 0 46 chr10 128526455 128526542 -17062746 + MER5B DNA MER1_type 5 87 -91 770 259 38 0 chr10 128526560 128526745 -17062543 + MER63A DNA MER1_type 10 201 -9 350 295 27 58 chr10 128527457 128527681 -17061607 - MIR SINE MIR 0 262 46 2140 117 0 0 chr10 128528064 128528392 -17060896 - AluSq SINE Alu 0 328 1 205 220 20 0 chr10 128529600 128529650 -17059638 + MER91B DNA MER1_type 12 62 -128 836 264 26 42 chr10 128529883 128530148 -17059140 + MIR SINE MIR 2 262 0 280 253 35 23 chr10 128530310 128530397 -17058891 + MIR SINE MIR 48 135 -127 211 189 38 0 chr10 128530464 128530517 -17058771 + (TTA)n Simple_repeat Simple_repeat 3 57 0 257 336 18 9 chr10 128531190 128531300 -17057988 + L2 LINE L2 2691 2801 -513 433 282 8 16 chr10 128532167 128532291 -17056997 + MIR SINE MIR 28 150 -112 2335 97 10 6 chr10 128533380 128533691 -17055597 - AluSx SINE Alu 0 312 1 296 295 13 0 chr10 128534019 128534097 -17055191 + (TG)n Simple_repeat Simple_repeat 2 80 0 2052 123 0 0 chr10 128534176 128534452 -17054836 - AluSx SINE Alu -9 303 28 223 159 79 16 chr10 128535251 128535314 -17053974 - L2 LINE L2 0 3272 3206 321 100 0 0 chr10 128536828 128536878 -17052410 + (TC)n Simple_repeat Simple_repeat 1 50 0 288 206 19 65 chr10 128536968 128537075 -17052213 - MLT1G1 LTR MaLR 0 595 494 523 272 120 11 chr10 128537395 128537586 -17051702 - MIR SINE MIR -8 254 43 815 210 11 34 chr10 128537770 128537946 -17051342 + MLT1H LTR MaLR 3 174 -375 719 187 128 37 chr10 128537992 128538179 -17051109 + MLT1H LTR MaLR 346 549 0 509 68 0 0 chr10 128538511 128538584 -17050704 - Alu SINE Alu 0 310 238 1488 76 0 11 chr10 128538691 128538876 -17050412 - AluY SINE Alu -128 183 1 470 291 20 20 chr10 128539727 128539878 -17049410 + L2 LINE L2 3122 3272 0 1168 172 90 61 chr10 128540019 128540397 -17048891 + LTR49-int LTR ERV1 4075 4463 -1868 277 252 65 28 chr10 128541236 128541343 -17047945 + MER5A DNA MER1_type 60 170 -19 222 315 55 16 chr10 128541239 128541366 -17047922 - MER5A DNA MER1_type -51 138 7 * 315 309 33 46 chr10 128544704 128544950 -17044338 + MIR SINE MIR 4 240 -22 2560 239 61 86 chr10 128545356 128546525 -17042763 + L1MC5 LINE L1 6720 7859 -102 36 70 0 0 chr10 128546639 128546710 -17042578 + AT_rich Low_complexity Low_complexity 1 71 0 460 233 29 10 chr10 128546810 128546913 -17042375 - L2 LINE L2 -4 3309 3205 779 236 85 13 chr10 128546925 128547157 -17042131 - MIR SINE MIR -5 257 12 2313 115 3 3 chr10 128547683 128547995 -17041293 - AluSq SINE Alu -1 312 1 22 70 0 0 chr10 128548002 128548045 -17041243 + AT_rich Low_complexity Low_complexity 1 43 0 2200 99 18 0 chr10 128548206 128548490 -17040798 - AluSx SINE Alu -23 289 1 299 213 13 13 chr10 128549829 128549904 -17039384 - MIR SINE MIR -78 184 110 305 68 91 0 chr10 128549918 128549962 -17039326 + Alu SINE Alu 238 285 -17 204 277 72 12 chr10 128550328 128550411 -17038877 - MIR SINE MIR -93 169 82 2289 40 40 50 chr10 128550412 128550709 -17038579 - AluY SINE Alu -17 294 1 2300 98 7 7 chr10 128553060 128553365 -17035923 + AluSq SINE Alu 1 305 -8 450 203 0 0 chr10 128553422 128553496 -17035792 + MER81 DNA DNA 2 75 -39 1591 80 26 9 chr10 128555590 128555816 -17033472 - MER30 DNA MER1_type 0 230 1 1296 217 165 37 chr10 128557269 128557313 -17031975 - MLT2B1 LTR ERVL 0 520 483 315 49 0 0 chr10 128557313 128557354 -17031934 + (CAGA)n Simple_repeat Simple_repeat 4 44 0 1296 217 165 37 chr10 128557354 128557770 -17031518 - MLT2B1 LTR ERVL -37 483 1 231 246 15 15 chr10 128558038 128558103 -17031185 + L2 LINE L2 3208 3272 0 485 222 54 54 chr10 128560417 128560602 -17028686 + MIR SINE MIR 57 241 -21 * 515 361 9 9 chr10 128560556 128560769 -17028519 - MIR SINE MIR -11 251 39 266 256 77 0 chr10 128561095 128561173 -17028115 + MIR SINE MIR 119 202 -60 318 167 14 14 chr10 128561504 128561576 -17027712 - L1MB3 LINE L1 -12 6171 6100 1045 211 87 79 chr10 128562953 128563109 -17026179 + MSTD LTR MaLR 1 154 -242 2355 100 0 29 chr10 128563109 128563242 -17026046 + AluSg SINE Alu 1 136 -174 2668 48 0 13 chr10 128563242 128563555 -17025733 + AluY SINE Alu 1 309 -2 2355 100 0 29 chr10 128563555 128563732 -17025556 + AluSg SINE Alu 136 302 -8 1045 211 87 79 chr10 128563732 128563968 -17025320 + MSTD LTR MaLR 154 396 0 2388 103 25 8 chr10 128563970 128564328 -17024960 + THE1B LTR MaLR 1 364 0 391 315 72 17 chr10 128565184 128565365 -17023923 - MIR SINE MIR 0 262 72 1869 183 36 82 chr10 128565386 128565911 -17023377 - L1MB7 LINE L1 -14 6170 5670 435 202 30 0 chr10 128565912 128566011 -17023277 - L1M4 LINE L1 -431 5747 5646 808 122 0 83 chr10 128566040 128566196 -17023092 - L1M4 LINE L1 -520 5664 5522 882 294 20 4 chr10 128567687 128567935 -17021353 - MIR SINE MIR 0 262 11 266 299 22 54 chr10 128569447 128569631 -17019657 - L2 LINE L2 -433 2881 2704 505 115 0 13 chr10 128569749 128569827 -17019461 + AluJ/FRAM SINE Alu 216 292 -20 1192 155 0 10 chr10 128571075 128571268 -17018020 + AluJo SINE Alu 122 312 0 5418 25 3 0 chr10 128571671 128572323 -17016965 + L1PA4 LINE L1 5499 6152 -3 528 276 51 0 chr10 128572380 128572536 -17016752 - MIR SINE MIR -49 213 50 276 218 46 11 chr10 128572565 128572652 -17016636 + MER5B DNA MER1_type 8 97 -81 245 341 22 0 chr10 128572663 128572754 -17016534 - MIR SINE MIR -68 140 48 2484 74 3 3 chr10 128573583 128573894 -17015394 - AluY SINE Alu 0 311 1 384 234 47 0 chr10 128574095 128574202 -17015086 + MER81 DNA DNA 1 112 -2 369 0 0 0 chr10 128574849 128574890 -17014398 + (CA)n Simple_repeat Simple_repeat 1 41 0 4331 165 17 26 chr10 128576378 128576862 -17012426 + L1MB4 LINE L1 5283 5760 -420 2391 93 3 3 chr10 128576862 128577163 -17012125 + AluSx SINE Alu 1 301 -11 4331 165 17 26 chr10 128577163 128577567 -17011721 + L1MB4 LINE L1 5760 6166 -14 2353 65 3 77 chr10 128579352 128579688 -17009600 - AluY SINE Alu 0 311 1 486 0 0 0 chr10 128580679 128580733 -17008555 + (TA)n Simple_repeat Simple_repeat 2 55 0 1040 131 6 0 chr10 128581714 128581889 -17007399 + (TGGA)n Simple_repeat Simple_repeat 1 176 0 230 198 60 52 chr10 128582542 128582658 -17006630 + L2 LINE L2 2920 3036 -236 599 193 100 0 chr10 128582841 128582991 -17006297 - MER5A DNA MER1_type -7 182 18 1014 248 100 25 chr10 128582997 128583396 -17005892 + L1MC5 LINE L1 7500 7928 -33 244 305 0 49 chr10 128583442 128583524 -17005764 + L2 LINE L2 3235 3312 -1 238 233 86 95 chr10 128584793 128584909 -17004379 - MIR SINE MIR -48 214 100 227 233 33 5 chr10 128586281 128586393 -17002895 + MER91A DNA MER1_type 15 174 -22 200 306 82 20 chr10 128586504 128586602 -17002686 + L3 LINE CR1 1398 1501 -76 508 280 169 18 chr10 128586799 128587024 -17002264 + MLT1L LTR MaLR 7 265 -350 490 274 6 76 chr10 128587256 128587434 -17001854 + MIR SINE MIR 60 224 -38 330 211 128 18 chr10 128587453 128587562 -17001726 - MIR SINE MIR -70 192 72 676 178 92 0 chr10 128587708 128587860 -17001428 + L1MB7 LINE L1 6003 6168 -16 240 35 0 0 chr10 128589289 128589318 -16999970 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 22 35 0 0 chr10 128590473 128590502 -16998786 + AT_rich Low_complexity Low_complexity 1 29 0 23 33 0 0 chr10 128591998 128592028 -16997260 + AT_rich Low_complexity Low_complexity 1 30 0 418 181 9 29 chr10 128592029 128592134 -16997154 - L1MA4A LINE L1 -1 6302 6200 325 306 22 15 chr10 128592664 128592798 -16996490 - MIR SINE MIR -81 181 47 438 20 0 0 chr10 128593734 128593785 -16995503 + (CA)n Simple_repeat Simple_repeat 2 52 0 195 217 67 17 chr10 128594468 128594528 -16994760 + MIR SINE MIR 84 146 -62 335 255 255 31 chr10 128594853 128595112 -16994176 - MLT1F LTR MaLR 0 542 226 1239 133 38 5 chr10 128595269 128595480 -16993808 + MER47A DNA MER2_type 7 224 -142 1219 183 19 0 chr10 128595482 128595690 -16993598 - AluSg/x SINE Alu -4 306 95 716 85 0 0 chr10 128595690 128595784 -16993504 - AluSg SINE Alu -160 150 57 1324 143 5 5 chr10 128595784 128595973 -16993315 - AluSg SINE Alu -121 189 1 896 103 41 14 chr10 128595974 128596120 -16993168 + MER47A DNA MER2_type 217 366 0 410 211 62 31 chr10 128596324 128596452 -16992836 - MER117 DNA MER1_type -59 138 7 1053 144 68 15 chr10 128597170 128597493 -16991795 - Tigger2 DNA MER2_type 0 2718 1 411 188 0 0 chr10 128597493 128597573 -16991715 + L1ME1 LINE L1 6082 6161 -5 1632 129 137 4 chr10 128597671 128597926 -16991362 + AluSg1 SINE Alu 1 289 -20 375 338 102 7 chr10 128597934 128598161 -16991127 - MIR SINE MIR -1 261 17 351 283 28 56 chr10 128598206 128598336 -16990952 - MIR SINE MIR -82 126 14 2077 130 37 0 chr10 128599782 128600081 -16989207 + AluSx SINE Alu 1 310 -2 233 308 65 0 chr10 128600500 128600607 -16988681 + MER117 DNA MER1_type 6 119 -78 427 181 106 88 chr10 128600610 128600770 -16988518 + MIR3 SINE MIR 35 197 -11 447 123 0 14 chr10 128601585 128601658 -16987630 + MER47A DNA MER2_type 295 366 0 333 242 0 0 chr10 128601852 128601926 -16987362 + AluS SINE Alu 5 60 -240 1975 149 0 3 chr10 128601926 128602215 -16987073 + AluSg SINE Alu 17 304 -6 2454 73 3 0 chr10 128602454 128602755 -16986533 + AluY SINE Alu 1 302 -9 1044 220 81 106 chr10 128603045 128603458 -16985830 + MLT1H LTR MaLR 72 473 -76 1677 184 10 7 chr10 128603458 128603746 -16985542 + AluJo SINE Alu 2 290 -22 1044 220 81 106 chr10 128603746 128603814 -16985474 + MLT1H LTR MaLR 473 541 -8 2347 141 40 35 chr10 128604192 128604646 -16984642 + MLT1D LTR MaLR 47 502 -3 1006 261 12 4 chr10 128604718 128604971 -16984317 - MIR SINE MIR 0 262 8 359 351 19 7 chr10 128604999 128605153 -16984135 - MIR SINE MIR -3 259 104 555 237 15 0 chr10 128605260 128605391 -16983897 + MER94 DNA DNA 2 134 0 500 270 135 30 chr10 128606170 128606400 -16982888 + MIR SINE MIR 8 261 -1 440 260 81 0 chr10 128606458 128606581 -16982707 - L2 LINE L2 -217 3055 2923 283 175 134 21 chr10 128607504 128607601 -16981687 - L1MC5 LINE L1 -44 7917 7810 352 266 180 0 chr10 128607895 128608023 -16981265 + MIR SINE MIR 31 181 -81 195 270 32 16 chr10 128608124 128608187 -16981101 - MIR SINE MIR -105 157 94 558 29 0 0 chr10 128608380 128608448 -16980840 + (TG)n Simple_repeat Simple_repeat 2 69 0 246 105 0 0 chr10 128608685 128608723 -16980565 + (A)n Simple_repeat Simple_repeat 1 38 0 24 0 0 0 chr10 128609985 128610009 -16979279 + GC_rich Low_complexity Low_complexity 1 24 0 182 31 0 62 chr10 128610367 128610399 -16978889 + (CCCCG)n Simple_repeat Simple_repeat 5 34 0 286 221 128 23 chr10 128611237 128611323 -16977965 - MIR SINE MIR -120 142 48 579 306 33 37 chr10 128611503 128611748 -16977540 + MIR SINE MIR 6 249 -13 181 379 11 11 chr10 128612496 128612583 -16976705 - MIR SINE MIR -122 140 54 227 288 36 22 chr10 128612635 128612774 -16976514 + L2 LINE L2 2751 2891 -423 475 261 15 30 chr10 128612864 128612998 -16976290 + L2 LINE L2 3182 3313 0 230 290 39 45 chr10 128613398 128613553 -16975735 + L2 LINE L2 2958 3111 -161 362 236 46 9 chr10 128613568 128613699 -16975589 - MIR SINE MIR -62 146 44 225 215 180 30 chr10 128614218 128614382 -16974906 + MIR SINE MIR 21 211 -51 194 306 14 28 chr10 128615193 128615265 -16974023 + L3 LINE CR1 1083 1153 -424 337 221 0 0 chr10 128615358 128615426 -16973862 + L2 LINE L2 3205 3272 0 2384 114 0 0 chr10 128615452 128615760 -16973528 + AluSq SINE Alu 1 308 -5 280 290 65 0 chr10 128615767 128615860 -16973428 - MIR SINE MIR -80 128 30 2242 119 30 25 chr10 128616271 128616633 -16972655 - THE1B LTR MaLR 0 364 1 249 179 54 0 chr10 128616653 128616709 -16972579 + MIR SINE MIR 82 140 -68 624 309 21 25 chr10 128617025 128617261 -16972027 - MIR SINE MIR -2 260 26 406 196 60 75 chr10 128617227 128617360 -16971928 + L2 LINE L2 3141 3271 -1 * 1836 144 11 0 chr10 128618429 128618699 -16970589 + AluJo SINE Alu 1 273 -39 667 169 0 28 chr10 128618705 128618883 -16970405 + GA-rich Low_complexity Low_complexity 2 174 0 22 35 0 0 chr10 128619066 128619095 -16970193 + AT_rich Low_complexity Low_complexity 1 29 0 272 220 1 25 chr10 128619236 128619316 -16969972 - L1MC5 LINE L1 -1 8041 7845 2178 143 94 13 chr10 128619404 128619797 -16969491 + MSTB LTR MaLR 1 425 -1 303 307 39 39 chr10 128619802 128619955 -16969333 - MIR SINE MIR -70 192 40 294 361 164 5 chr10 128620396 128620615 -16968673 + MIR SINE MIR 8 261 -1 488 267 34 14 chr10 128621118 128621264 -16968024 + MIR SINE MIR 13 161 -101 396 209 146 9 chr10 128621294 128621404 -16967884 + MIR SINE MIR 47 171 -91 190 338 0 0 chr10 128621506 128621574 -16967714 + MIR SINE MIR 175 242 -20 2109 140 3 0 chr10 128622696 128622988 -16966300 - AluSx SINE Alu -19 293 1 2178 135 7 0 chr10 128623065 128623368 -16965920 + AluSx SINE Alu 1 305 -7 1738 149 16 72 chr10 128623421 128623742 -16965546 + AluJb SINE Alu 1 303 -9 546 232 9 118 chr10 128624640 128624860 -16964428 - MIR SINE MIR -16 246 51 563 235 134 0 chr10 128625376 128625555 -16963733 + MIR SINE MIR 60 262 0 309 301 49 14 chr10 128625661 128625804 -16963484 + L1ME4a LINE L1 5968 6115 -6 285 313 18 27 chr10 128626140 128626252 -16963036 - MIR SINE MIR -82 126 16 22 35 0 0 chr10 128626423 128626452 -16962836 + AT_rich Low_complexity Low_complexity 1 29 0 387 306 226 12 chr10 128626654 128626902 -16962386 - L3 LINE CR1 -1 1576 1276 653 265 94 30 chr10 128627132 128627366 -16961922 - MLT1L LTR MaLR -349 266 18 2379 123 28 14 chr10 128627446 128627805 -16961483 + THE1B LTR MaLR 1 364 0 297 237 129 21 chr10 128628129 128628222 -16961066 + MIR SINE MIR 23 125 -83 257 304 43 26 chr10 128628367 128628482 -16960806 + MIR SINE MIR 96 212 -50 28 48 0 0 chr10 128628748 128628790 -16960498 + AT_rich Low_complexity Low_complexity 1 42 0 847 171 7 27 chr10 128628803 128628938 -16960350 + AluSq/x SINE Alu 1 134 -178 2300 114 0 7 chr10 128628938 128629245 -16960043 + AluSx SINE Alu 1 305 -7 409 182 341 0 chr10 128629318 128629450 -16959838 + AluJo SINE Alu 120 296 -6 250 267 33 0 chr10 128629782 128629842 -16959446 - L2 LINE L2 -13 3259 3198 2078 143 27 0 chr10 128630316 128630609 -16958679 - AluSx SINE Alu -11 301 1 2489 265 104 62 chr10 128631902 128633325 -16955963 + L1MC4a LINE L1 5550 7032 -776 307 319 60 11 chr10 128633583 128633765 -16955523 - L1MC4a LINE L1 -1866 5942 5752 269 288 0 0 chr10 128633906 128633972 -16955316 - MER81 DNA DNA -5 109 44 546 254 0 0 chr10 128633980 128634094 -16955194 - MER81 DNA DNA 0 114 1 3438 139 19 0 chr10 128635666 128636248 -16953040 + L1MB7 LINE L1 5573 6165 -19 1502 140 52 16 chr10 128636288 128636538 -16952750 - AluJo SINE Alu -53 259 1 264 346 38 0 chr10 128637827 128637960 -16951328 - MIR SINE MIR -67 195 58 271 194 168 43 chr10 128640205 128640365 -16948923 - MIR SINE MIR -29 179 15 1754 167 43 23 chr10 128640380 128640597 -16948691 - AluJb SINE Alu 0 312 118 189 0 0 0 chr10 128640597 128640618 -16948670 + (TTA)n Simple_repeat Simple_repeat 2 22 0 1754 167 43 23 chr10 128640618 128640739 -16948549 - AluJb SINE Alu -194 118 1 213 211 0 0 chr10 128641544 128641601 -16947687 + (ATG)n Simple_repeat Simple_repeat 3 59 0 378 325 0 0 chr10 128641610 128641730 -16947558 + MIR SINE MIR 30 149 -59 2765 10 0 0 chr10 128641754 128642048 -16947240 - AluYa5 SINE Alu -17 294 1 195 331 65 8 chr10 128642139 128642263 -16947025 - MER5A DNA MER1_type -2 187 57 437 317 71 29 chr10 128642883 128643123 -16946165 - MIR SINE MIR -12 250 1 620 246 70 27 chr10 128645285 128645472 -16943816 + MER63 DNA MER1_type 702 896 -165 2317 109 0 0 chr10 128645472 128645765 -16943523 - AluSg SINE Alu -17 293 1 472 169 0 0 chr10 128645769 128645846 -16943442 + MER63 DNA MER1_type 954 1030 -30 1219 218 10 42 chr10 128646358 128646502 -16942786 + AluJb SINE Alu 1 148 -164 186 43 0 0 chr10 128646502 128646525 -16942763 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 1219 218 10 42 chr10 128646525 128646692 -16942596 + AluJb SINE Alu 148 302 -10 340 278 28 0 chr10 128647277 128647385 -16941903 + MLT1I LTR MaLR 198 308 -101 292 260 26 0 chr10 128647993 128648070 -16941218 - Charlie4a DNA MER1_type -6 502 424 26 0 0 0 chr10 128648070 128648096 -16941192 + AT_rich Low_complexity Low_complexity 1 26 0 1100 188 29 14 chr10 128648096 128648266 -16941022 - AluJb SINE Alu -17 295 120 297 0 0 0 chr10 128648266 128648299 -16940989 + (TTTTA)n Simple_repeat Simple_repeat 2 34 0 1100 188 29 14 chr10 128648299 128648336 -16940952 - AluJb SINE Alu -192 120 85 1272 211 103 13 chr10 128648336 128648715 -16940573 - Charlie4a DNA MER1_type -70 438 26 1503 130 39 115 chr10 128648722 128649052 -16940236 + AluJo SINE Alu 1 305 -7 225 0 0 0 chr10 128649097 128649122 -16940166 + (ATG)n Simple_repeat Simple_repeat 3 27 0 1151 305 77 17 chr10 128649570 128650392 -16938896 + L1ME3 LINE L1 5079 5951 -211 207 329 117 10 chr10 128650795 128650954 -16938334 - MIR SINE MIR -70 192 17 222 341 79 0 chr10 128651258 128651384 -16937904 + L2 LINE L2 2614 2749 -565 320 231 12 100 chr10 128651392 128651465 -16937823 + L1MC4a LINE L1 5861 5914 -1894 2061 112 40 4 chr10 128651465 128651743 -16937545 - AluSx SINE Alu -24 288 1 320 231 12 100 chr10 128651743 128651829 -16937459 + L1MC4a LINE L1 5914 6006 -1802 496 226 55 7 chr10 128651880 128652026 -16937262 + MLT1J2 LTR MaLR 10 162 -288 551 284 77 6 chr10 128652104 128652287 -16937001 + L2 LINE L2 3108 3303 -10 276 111 0 0 chr10 128652289 128652334 -16936954 + (TGAA)n Simple_repeat Simple_repeat 2 46 0 442 302 170 29 chr10 128654261 128654330 -16934958 + L1MC4a LINE L1 5383 5441 -690 533 203 53 118 chr10 128654330 128654374 -16934914 - MER5B DNA MER1_type 0 178 133 2133 124 0 0 chr10 128654374 128654677 -16934611 - AluSx SINE Alu 0 303 1 533 203 53 118 chr10 128654677 128654721 -16934567 - MER5B DNA MER1_type -45 133 88 396 40 0 0 chr10 128654721 128654771 -16934517 + (CA)n Simple_repeat Simple_repeat 2 51 0 533 203 53 118 chr10 128654771 128654867 -16934421 - MER5B DNA MER1_type -90 88 4 442 302 170 29 chr10 128654867 128655192 -16934096 + L1MC4a LINE L1 5441 5829 -302 320 276 125 34 chr10 128656201 128656465 -16932823 - L1ME4a LINE L1 -22 6099 5812 260 290 0 0 chr10 128656530 128656599 -16932689 + L1MC/D LINE L1 5741 5809 -1999 2225 114 3 3 chr10 128656600 128656899 -16932389 - AluSx SINE Alu -13 299 1 253 147 15 15 chr10 128657019 128657087 -16932201 + (TA)n Simple_repeat Simple_repeat 2 69 0 322 327 63 24 chr10 128657203 128657408 -16931880 - L1ME4a LINE L1 -282 5839 5627 1094 248 78 51 chr10 128657660 128657822 -16931466 + L2 LINE L2 2644 2800 -513 2539 68 0 6 chr10 128657822 128658133 -16931155 - AluY SINE Alu -2 309 1 1094 248 78 51 chr10 128658133 128658422 -16930866 + L2 LINE L2 2800 3120 -193 2334 107 0 0 chr10 128658422 128658721 -16930567 - AluSx SINE Alu -13 299 1 1094 248 78 51 chr10 128658721 128658920 -16930368 + L2 LINE L2 3120 3312 -1 207 111 28 0 chr10 128659765 128659801 -16929487 + (TAA)n Simple_repeat Simple_repeat 1 37 0 180 259 62 49 chr10 128659801 128659882 -16929406 - MIR SINE MIR 0 262 181 314 105 0 0 chr10 128659953 128660010 -16929278 + AluSp/q SINE Alu 247 303 0 600 250 79 85 chr10 128660030 128660227 -16929061 + L1MEd LINE L1 1466 1663 -4877 1946 159 0 28 chr10 128660227 128660548 -16928740 + AluJo SINE Alu 1 312 0 600 250 79 85 chr10 128660548 128660904 -16928384 + L1MEd LINE L1 1663 2002 -4538 1791 212 0 0 chr10 128661016 128661323 -16927965 + AluJb SINE Alu 1 307 -5 288 208 59 54 chr10 128661542 128661640 -16927648 + L1MEd LINE L1 2452 2548 -3992 2332 81 0 38 chr10 128661640 128661960 -16927328 + AluY SINE Alu 1 308 -3 288 208 59 54 chr10 128661960 128662114 -16927174 + L1MEd LINE L1 2548 2702 -3838 864 245 27 48 chr10 128662118 128662254 -16927034 + L1MEd LINE L1 3099 3236 -3304 2110 145 3 3 chr10 128662254 128662558 -16926730 + AluSx SINE Alu 1 304 -8 864 245 27 48 chr10 128662558 128662834 -16926454 + L1MEd LINE L1 3236 3502 -3038 242 179 18 0 chr10 128663052 128663108 -16926180 - MER113 DNA MER1_type? -335 186 130 2024 133 10 26 chr10 128663120 128663422 -16925866 + AluSx SINE Alu 1 297 -15 36 40 0 0 chr10 128663466 128663516 -16925772 + AT_rich Low_complexity Low_complexity 1 50 0 217 209 35 93 chr10 128663522 128663582 -16925706 + MIR SINE MIR 126 181 -81 2405 82 7 7 chr10 128663582 128663887 -16925401 + AluY SINE Alu 1 305 -6 217 209 35 93 chr10 128663887 128663912 -16925376 + MIR SINE MIR 181 206 -56 201 211 0 0 chr10 128665166 128665218 -16924070 + (TG)n Simple_repeat Simple_repeat 2 53 0 267 218 35 35 chr10 128665218 128665305 -16923983 - MIR3 SINE MIR -109 99 13 201 94 62 0 chr10 128665876 128665908 -16923380 + (CGGGG)n Simple_repeat Simple_repeat 1 34 0 573 259 0 0 chr10 128665985 128666097 -16923191 + MER81 DNA DNA 2 113 -1 258 230 35 35 chr10 128667079 128667166 -16922122 + MIR3 SINE MIR 13 99 -109 279 234 0 0 chr10 128667166 128667243 -16922045 + (CA)n Simple_repeat Simple_repeat 2 78 0 452 248 33 33 chr10 128667533 128667654 -16921634 - L2 LINE L2 -5 3308 3188 590 203 51 121 chr10 128669402 128669698 -16919590 + L1MD3 LINE L1 6099 7995 0 361 351 91 47 chr10 128669701 128670301 -16918987 + L1MC4a LINE L1 5494 6121 0 503 295 101 34 chr10 128670489 128670787 -16918501 + MLT1I LTR MaLR 72 389 -20 185 132 26 0 chr10 128671818 128671856 -16917432 + CT-rich Low_complexity Low_complexity 2 40 0 2506 54 0 0 chr10 128672737 128673031 -16916257 + AluY SINE Alu 1 294 -17 1795 144 7 21 chr10 128673918 128674209 -16915079 - AluJb SINE Alu -25 287 1 539 249 67 83 chr10 128674498 128674843 -16914445 + MLT1D LTR MaLR 7 331 -59 447 263 138 14 chr10 128674838 128675217 -16914071 + LTR33 LTR ERVL 48 513 -8 * 198 328 40 32 chr10 128675371 128675496 -16913792 - MIR SINE MIR -77 131 5 558 327 27 14 chr10 128677050 128677273 -16912015 + MIR SINE MIR 19 244 -18 1121 128 27 16 chr10 128678301 128678488 -16910800 + MER5A DNA MER1_type 1 189 0 181 305 136 0 chr10 128678513 128678572 -16910716 - MIR SINE MIR -59 149 83 643 321 100 31 chr10 128678585 128679021 -16910267 - L2 LINE L2 -38 3275 2800 234 0 0 0 chr10 128679283 128679309 -16909979 + (A)n Simple_repeat Simple_repeat 1 26 0 282 291 36 27 chr10 128679453 128679563 -16909725 + MIR SINE MIR 111 221 -41 219 259 12 35 chr10 128679644 128679729 -16909559 - L3 LINE CR1 -496 1081 999 2187 120 0 0 chr10 128679874 128680196 -16909092 + AluSx SINE Alu 1 322 0 2578 56 0 7 chr10 128680951 128681257 -16908031 - AluY SINE Alu -7 304 1 1858 137 16 46 chr10 128681307 128681613 -16907675 + AluJo SINE Alu 1 297 -15 514 241 130 55 chr10 128681619 128681980 -16907308 + L1MDb LINE L1 935 1324 -5072 327 289 58 63 chr10 128682728 128682918 -16906370 - L3 LINE CR1 -700 877 689 207 69 0 0 chr10 128682951 128682980 -16906308 + (A)n Simple_repeat Simple_repeat 1 29 0 1902 157 3 28 chr10 128682989 128683307 -16905981 + AluSx SINE Alu 1 310 -2 385 348 44 10 chr10 128683659 128683863 -16905425 - MIR SINE MIR -6 256 46 276 333 89 14 chr10 128685585 128685798 -16903490 + L2 LINE L2 2429 2657 -657 1916 158 56 0 chr10 128687061 128687402 -16901886 + MLT1A1 LTR MaLR 6 365 0 1914 133 51 3 chr10 128687534 128687827 -16901461 - AluJb SINE Alu -5 307 1 24 0 0 0 chr10 128687907 128687931 -16901357 + AT_rich Low_complexity Low_complexity 1 24 0 1491 267 179 22 chr10 128688194 128689390 -16899898 + L2 LINE L2 1928 3306 -7 239 320 98 0 chr10 128689511 128689633 -16899655 + L2 LINE L2 3136 3269 -3 1021 317 136 23 chr10 128690099 128690717 -16898571 + L3 LINE CR1 280 967 -610 4092 177 56 16 chr10 128690866 128692289 -16896999 + L1MB8 LINE L1 4345 5831 -353 250 128 0 0 chr10 128692289 128692328 -16896960 + AluJb SINE Alu 1 39 -263 2120 107 4 4 chr10 128692333 128692636 -16896652 - AluSc SINE Alu 0 303 1 1882 151 3 17 chr10 128692636 128692926 -16896362 + AluJb SINE Alu 26 312 0 1911 145 19 40 chr10 128692917 128692932 -16896356 + L1MB8 LINE L1 5814 5828 -350 2217 118 0 3 chr10 128692932 128693236 -16896052 + AluSx SINE Alu 1 303 -9 1911 145 19 40 chr10 128693236 128693593 -16895695 + L1MB8 LINE L1 5828 6178 0 297 330 204 6 chr10 128693593 128693769 -16895519 + L3 LINE CR1 1103 1313 -264 193 302 0 0 chr10 128694042 128694095 -16895193 + L2 LINE L2 3205 3257 -15 218 32 32 0 chr10 128694097 128694128 -16895160 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 747 234 66 26 chr10 128694512 128694738 -16894550 - MIR SINE MIR 0 262 28 772 194 142 0 chr10 128696289 128696444 -16892844 - MER45A DNA AcHobo -1 177 1 2422 122 23 0 chr10 128696754 128697106 -16892182 + THE1B LTR MaLR 2 361 -3 295 231 20 14 chr10 128698129 128698193 -16891095 + (TA)n Simple_repeat Simple_repeat 1 63 -85 1820 145 17 10 chr10 128698193 128698483 -16890805 + AluJb SINE Alu 1 292 -20 295 231 20 14 chr10 128698483 128698565 -16890723 + (TA)n Simple_repeat Simple_repeat 63 148 0 936 164 0 68 chr10 128698613 128698790 -16890498 + Tigger3(Golem) DNA MER2_type 2865 3029 0 187 272 87 0 chr10 128698795 128698887 -16890401 + MIR SINE MIR 149 248 -14 264 340 47 52 chr10 128698946 128699178 -16890110 - L2 LINE L2 -180 3092 2862 2347 106 0 0 chr10 128699864 128700166 -16889122 - AluSc SINE Alu -7 302 1 199 231 0 0 chr10 128700498 128700537 -16888751 - L2 LINE L2 -22 3250 3212 262 96 0 58 chr10 128701301 128701353 -16887935 - L2 LINE L2 -4 3309 3261 341 222 37 12 chr10 128702895 128702976 -16886312 + MIR SINE MIR 68 150 -112 196 263 0 84 chr10 128703352 128703447 -16885841 + L2 LINE L2 3186 3272 0 315 0 0 0 chr10 128704469 128704504 -16884784 + (CA)n Simple_repeat Simple_repeat 2 36 0 234 0 0 0 chr10 128707305 128707331 -16881957 + (A)n Simple_repeat Simple_repeat 1 26 0 25 31 0 0 chr10 128709140 128709172 -16880116 + AT_rich Low_complexity Low_complexity 1 32 0 1875 123 78 0 chr10 128710309 128710593 -16878695 - AluSg SINE Alu -4 306 1 354 297 104 30 chr10 128711129 128711331 -16877957 - MIR SINE MIR -23 239 23 439 256 41 8 chr10 128711414 128711535 -16877753 - MER5B DNA MER1_type 0 178 54 184 333 0 0 chr10 128711622 128711673 -16877615 + MER5A DNA MER1_type 139 189 0 328 267 43 17 chr10 128711811 128711927 -16877361 + MIR SINE MIR 2 120 -142 195 250 0 17 chr10 128712190 128712250 -16877038 - MIR SINE MIR -82 180 122 196 195 0 0 chr10 128712277 128712318 -16876970 - MIR SINE MIR -98 164 124 495 233 78 0 chr10 128713720 128713836 -16875452 + L2 LINE L2 3189 3313 0 2451 90 0 3 chr10 128714038 128714348 -16874940 - AluSc SINE Alu 0 309 1 427 258 32 38 chr10 128714360 128714546 -16874742 - L1ME4a LINE L1 -3 6118 5934 430 264 27 0 chr10 128715361 128715471 -16873817 - L2 LINE L2 0 3272 3160 208 324 29 10 chr10 128716610 128716712 -16872576 + L2 LINE L2 3169 3272 0 248 241 75 19 chr10 128718458 128718569 -16870719 - MIR SINE MIR -63 145 79 265 275 0 38 chr10 128718587 128718667 -16870621 + L2 LINE L2 3196 3272 0 231 285 236 8 chr10 128718708 128718831 -16870457 - MIR3 SINE MIR -26 182 32 761 96 0 0 chr10 128719110 128719214 -16870074 + AluSg/x SINE Alu 199 302 -10 2388 128 16 13 chr10 128719649 128720023 -16869265 + THE1C LTR MaLR 1 375 0 208 267 13 27 chr10 128720099 128720174 -16869114 + MIR3 SINE MIR 13 86 -122 287 135 0 60 chr10 128720337 128720403 -16868885 + MLT1H1 LTR MaLR 161 297 -298 495 239 126 54 chr10 128720474 128720713 -16868575 + MLT1H1 LTR MaLR 292 547 -8 2658 46 0 0 chr10 128720714 128721016 -16868272 + AluY SINE Alu 1 302 -9 208 333 118 0 chr10 128721039 128721183 -16868105 + MIR SINE MIR 76 236 -26 2377 90 0 7 chr10 128721980 128722280 -16867008 + AluSg SINE Alu 2 299 -11 2216 132 7 0 chr10 128722362 128722672 -16866616 + AluJb SINE Alu 1 312 0 2095 86 8 0 chr10 128722733 128722990 -16866298 + AluSc SINE Alu 21 279 -30 2404 48 41 0 chr10 128724420 128724710 -16864578 + AluY SINE Alu 1 302 -9 2225 105 7 0 chr10 128725343 128725638 -16863650 - AluSx SINE Alu -15 297 1 778 277 110 23 chr10 128725883 128726237 -16863051 - HAL1 LINE L1 -737 1770 1386 210 167 0 21 chr10 128726771 128726819 -16862469 + (CCA)n Simple_repeat Simple_repeat 1 47 0 232 372 62 0 chr10 128727398 128727511 -16861777 + L2 LINE L2 3136 3255 -17 276 313 0 9 chr10 128727517 128727629 -16861659 - MIR3 SINE MIR -4 204 94 347 254 87 8 chr10 128728154 128728280 -16861008 + MIR SINE MIR 52 187 -75 189 0 0 0 chr10 128728936 128728957 -16860331 + (TA)n Simple_repeat Simple_repeat 1 21 0 193 265 0 0 chr10 128729280 128729329 -16859959 + L2 LINE L2 3224 3272 0 2153 124 13 3 chr10 128729881 128730188 -16859100 + AluSx SINE Alu 1 310 -2 384 22 0 0 chr10 128731056 128731101 -16858187 + (CA)n Simple_repeat Simple_repeat 1 45 0 1106 125 27 0 chr10 128731114 128731298 -16857990 - L1MD3 LINE L1 -77 7918 7730 505 228 37 15 chr10 128731630 128731766 -16857522 + MIR SINE MIR 60 198 -64 2438 81 0 7 chr10 128731896 128732194 -16857094 + AluSq SINE Alu 1 296 -17 2215 117 0 0 chr10 128732443 128732725 -16856563 + AluSx SINE Alu 1 282 -30 2194 100 10 7 chr10 128732889 128733190 -16856098 - AluSg SINE Alu -8 302 1 761 270 38 0 chr10 128733318 128733529 -16855759 + MER20 DNA MER1_type 1 219 0 548 230 189 22 chr10 128733588 128733810 -16855478 - MIR SINE MIR -2 260 2 255 216 69 43 chr10 128733826 128733942 -16855346 - L1 LINE L1 -1094 5052 4934 255 268 102 16 chr10 128734102 128734229 -16855059 + MIR SINE MIR 3 140 -122 1737 139 71 11 chr10 128734247 128734528 -16854760 + AluJo SINE Alu 1 298 -14 1216 145 0 84 chr10 128735079 128735306 -16853982 + AluJo SINE Alu 85 292 -20 194 241 149 23 chr10 128735412 128735499 -16853789 - L2 LINE L2 -33 3239 3142 423 200 85 31 chr10 128735821 128735951 -16853337 + MARNA DNA Mariner 277 413 -173 227 271 0 0 chr10 128736207 128736255 -16853033 + (TG)n Simple_repeat Simple_repeat 1 48 0 436 238 48 9 chr10 128737537 128737717 -16851571 + MIR SINE MIR 18 256 -6 1480 156 74 7 chr10 128738097 128738366 -16850922 + AluJb SINE Alu 12 298 -14 21 0 0 0 chr10 128739419 128739440 -16849848 + AT_rich Low_complexity Low_complexity 1 21 0 2342 79 3 3 chr10 128739629 128739919 -16849369 + AluSq SINE Alu 5 294 -19 2621 88 40 6 chr10 128740035 128740387 -16848901 + THE1B LTR MaLR 1 364 0 2132 131 0 3 chr10 128742386 128742684 -16846604 - AluSx SINE Alu -15 297 1 1434 138 5 0 chr10 128743069 128743272 -16846016 - AluJb SINE Alu -25 287 84 354 45 0 0 chr10 128743272 128743316 -16845972 + (CA)n Simple_repeat Simple_repeat 1 44 0 2386 43 7 3 chr10 128744391 128744673 -16844615 + AluY SINE Alu 1 283 -28 252 0 0 0 chr10 128744673 128744701 -16844587 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 368 253 44 0 chr10 128745518 128745609 -16843679 - MIR SINE MIR -76 186 92 232 281 115 0 chr10 128745652 128745748 -16843540 + L2 LINE L2 2933 3039 -274 2646 46 0 3 chr10 128746460 128746763 -16842525 - AluY SINE Alu -9 302 1 279 0 0 0 chr10 128750690 128750721 -16838567 + (CA)n Simple_repeat Simple_repeat 2 32 0 21 0 0 0 chr10 128750747 128750768 -16838520 + AT_rich Low_complexity Low_complexity 1 21 0 25 75 0 0 chr10 128750989 128751042 -16838246 + AT_rich Low_complexity Low_complexity 1 53 0 239 232 87 0 chr10 128755151 128755220 -16834068 - MER63 DNA MER1_type -133 703 3 364 218 23 11 chr10 128755410 128755497 -16833791 + L2 LINE L2 3136 3223 -49 1465 288 91 16 chr10 128756070 128756644 -16832644 - MLT2F LTR ERVL -22 641 25 499 279 17 39 chr10 128757224 128757403 -16831885 - MIR3 SINE MIR -14 194 20 308 340 80 12 chr10 128758039 128758201 -16831087 - MIR3 SINE MIR -6 202 30 21 0 0 0 chr10 128759544 128759565 -16829723 + AT_rich Low_complexity Low_complexity 1 21 0 423 0 0 0 chr10 128761294 128761341 -16827947 + (CA)n Simple_repeat Simple_repeat 1 47 0 399 156 104 0 chr10 128763546 128763642 -16825646 + MIR SINE MIR 83 188 -74 2172 115 0 35 chr10 128764545 128764859 -16824429 - AluSx SINE Alu -9 303 1 225 209 77 77 chr10 128764935 128765026 -16824262 - MARNA DNA Mariner -472 114 24 183 284 8 142 chr10 128765144 128765271 -16824017 - MIR3 SINE MIR -8 200 91 435 283 81 12 chr10 128765380 128765553 -16823735 - MIR SINE MIR -50 212 28 2234 109 7 0 chr10 128765789 128766083 -16823205 + AluSx SINE Alu 1 296 -16 210 37 0 0 chr10 128766486 128766513 -16822775 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1092 279 34 38 chr10 128766803 128767248 -16822040 - L2 LINE L2 0 3313 2871 408 20 0 0 chr10 128767250 128767299 -16821989 + (TG)n Simple_repeat Simple_repeat 1 49 0 2087 114 35 0 chr10 128770994 128771283 -16818005 + AluSq SINE Alu 1 299 -14 2865 10 0 3 chr10 128772664 128772974 -16816314 + AluYb8 SINE Alu 1 309 -9 897 265 57 0 chr10 128773852 128774082 -16815206 - MIR SINE MIR -19 243 1 21 57 0 0 chr10 128774254 128774289 -16814999 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr10 128774618 128774640 -16814648 + AT_rich Low_complexity Low_complexity 1 22 0 400 356 0 34 chr10 128776788 128776993 -16812295 - MIR3 SINE MIR -6 202 5 23 33 0 0 chr10 128778131 128778161 -16811127 + AT_rich Low_complexity Low_complexity 1 30 0 315 0 0 0 chr10 128782026 128782061 -16807227 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 252 0 0 0 chr10 128786100 128786128 -16803160 + (TG)n Simple_repeat Simple_repeat 2 29 0 421 220 40 0 chr10 128788233 128788333 -16800955 + MIR SINE MIR 31 134 -128 608 237 61 31 chr10 128788717 128788945 -16800343 - MIR SINE MIR -16 246 12 228 250 102 37 chr10 128790527 128790635 -16798653 - MIR SINE MIR -76 186 72 249 320 39 23 chr10 128791093 128791221 -16798067 - L1MC5 LINE L1 -164 7797 7668 265 242 168 89 chr10 128791342 128791532 -16797756 + MIR SINE MIR 31 235 -27 182 394 0 0 chr10 128791939 128792005 -16797283 + L2 LINE L2 2931 2996 -276 275 343 14 0 chr10 128792147 128792217 -16797071 + L2 LINE L2 3158 3228 -44 288 278 110 90 chr10 128793228 128793483 -16795805 - L2 LINE L2 -13 3259 3000 1605 123 21 0 chr10 128794379 128794615 -16794673 - AluSx SINE Alu -8 304 64 1988 110 48 24 chr10 128795208 128795499 -16793789 - AluSx SINE Alu -14 298 1 321 265 147 29 chr10 128797264 128797434 -16791854 + MIR3 SINE MIR 4 193 -15 2503 184 24 38 chr10 128798049 128798181 -16791107 - L1MB5 LINE L1 0 6174 6042 2314 90 0 7 chr10 128798181 128798470 -16790818 - AluSp SINE Alu -26 287 1 2503 184 24 38 chr10 128798470 128798913 -16790375 - L1MB5 LINE L1 -132 6042 5607 1620 123 43 20 chr10 128798915 128799168 -16790120 - AluSx SINE Alu -53 259 1 1625 185 30 4 chr10 128799252 128799617 -16789671 - MSTB LTR MaLR -4 422 1 248 224 0 0 chr10 128799827 128799876 -16789412 - MLT1I LTR MaLR -281 128 80 574 134 21 10 chr10 128799891 128799988 -16789300 + MER4A LTR ERV1 1 98 -566 1578 126 22 73 chr10 128799988 128800352 -16788936 + MER4A LTR ERV1 261 664 0 2301 87 31 0 chr10 128801119 128801240 -16788048 + AluSx SINE Alu 2 118 -194 228 35 0 0 chr10 128801240 128801269 -16788019 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2301 87 31 0 chr10 128801269 128801433 -16787855 + AluSx SINE Alu 118 296 -16 791 257 140 10 chr10 128801574 128801866 -16787422 - L1MEc LINE L1 -6027 369 40 3995 122 30 53 chr10 128801940 128802627 -16786661 - L1MC1 LINE L1 0 6333 5664 1994 153 0 0 chr10 128802627 128802909 -16786379 + AluSx SINE Alu 2 283 -29 3995 122 30 53 chr10 128802909 128802991 -16786297 - L1MC1 LINE L1 -669 5664 5582 1938 145 0 14 chr10 128802991 128803274 -16786014 + AluSx SINE Alu 1 279 -33 300 53 0 0 chr10 128803274 128803312 -16785976 + (CA)n Simple_repeat Simple_repeat 1 38 0 322 174 0 14 chr10 128803312 128803368 -16785920 - L1MB5 LINE L1 -697 5636 5580 2395 115 0 0 chr10 128803368 128803680 -16785608 + AluSx SINE Alu 1 312 0 322 174 0 14 chr10 128803680 128803692 -16785596 - L1MB5 LINE L1 -753 5580 5569 216 0 0 0 chr10 128803848 128803872 -16785416 + (TA)n Simple_repeat Simple_repeat 2 25 0 2675 221 7 27 chr10 128803907 128804467 -16784821 - MLT2B3 LTR ERVL -5 549 1 264 258 69 57 chr10 128804467 128804589 -16784699 - MLT1J LTR MaLR -54 457 334 837 185 37 6 chr10 128804603 128804765 -16784523 + MER5A DNA MER1_type 1 167 -22 282 274 24 75 chr10 128804819 128805031 -16784257 - MLT1J1 LTR MaLR -233 213 13 218 206 0 95 chr10 128805525 128805588 -16783700 + MIR SINE MIR 105 161 -101 357 267 12 0 chr10 128806164 128806250 -16783038 + MIR SINE MIR 172 258 -4 450 248 23 16 chr10 128806510 128806654 -16782634 - MIR SINE MIR -66 142 30 2399 90 3 0 chr10 128807027 128807326 -16781962 - AluY SINE Alu -11 300 1 3335 119 46 0 chr10 128807379 128807883 -16781405 + MER1A DNA MER1_type 1 527 0 623 203 109 0 chr10 128808147 128808285 -16781003 + MIR SINE MIR 62 214 -48 274 340 0 11 chr10 128808357 128808451 -16780837 + MER5B DNA MER1_type 1 93 -85 406 279 6 50 chr10 128808698 128808859 -16780429 + L2 LINE L2 2921 3074 -239 754 269 110 35 chr10 128808873 128809248 -16780040 + MLT1J LTR MaLR 5 380 -66 305 308 0 0 chr10 128809440 128809505 -16779783 + L2 LINE L2 3134 3198 -74 810 249 91 28 chr10 128809513 128809907 -16779381 + HsTC2 DNA Tc2 32 739 -1159 564 277 23 17 chr10 128809911 128810088 -16779200 + HsTC2 DNA Tc2 1284 1637 -261 2207 127 0 13 chr10 128810866 128811182 -16778106 + AluSx SINE Alu 1 312 0 297 301 59 47 chr10 128811199 128811435 -16777853 + L1MCc LINE L1 1284 1522 -4901 1610 145 12 0 chr10 128811461 128811709 -16777579 + AluSq SINE Alu 58 308 -5 1335 165 19 148 chr10 128811731 128811980 -16777308 + L1MC/D LINE L1 5134 5288 -1047 2535 70 0 0 chr10 128811980 128812278 -16777010 + AluY SINE Alu 1 298 -13 1335 165 19 148 chr10 128812278 128812549 -16776739 + L1MC/D LINE L1 5288 5592 -743 871 94 282 12 chr10 128812554 128812724 -16776564 - AluSg/x SINE Alu -1 308 93 1863 106 0 0 chr10 128812726 128812961 -16776327 - AluSq SINE Alu -78 235 1 645 56 0 0 chr10 128813389 128813479 -16775809 + (GA)n Simple_repeat Simple_repeat 2 91 0 2244 67 63 7 chr10 128814208 128814493 -16774795 - AluY SINE Alu -10 301 1 1811 162 0 58 chr10 128814498 128814825 -16774463 - AluSx SINE Alu -4 308 1 2030 239 32 19 chr10 128814897 128815487 -16773801 + L1M4 LINE L1 4505 5102 -1044 547 351 19 35 chr10 128815660 128815847 -16773441 + ERVL LTR ERVL 4855 5035 -729 2306 105 27 21 chr10 128815847 128816220 -16773068 + THE1C LTR MaLR 1 375 0 547 351 19 35 chr10 128816220 128816405 -16772883 + ERVL LTR ERVL 5035 5221 -543 477 317 153 57 chr10 128816609 128816839 -16772449 - HERV16 LTR ERVL -4688 308 45 1999 155 0 3 chr10 128816839 128817135 -16772153 - AluSx SINE Alu -17 295 1 477 317 153 57 chr10 128817135 128817185 -16772103 - HERV16 LTR ERVL -4951 45 1 422 323 73 10 chr10 128817189 128817460 -16771828 - LTR16B LTR ERVL -8 450 151 336 230 103 0 chr10 128819312 128819399 -16769889 + MIR SINE MIR 88 183 -79 382 298 18 58 chr10 128820379 128820509 -16768779 + MER5A DNA MER1_type 21 144 -45 1908 157 10 13 chr10 128820509 128820815 -16768473 + AluJb SINE Alu 1 305 -7 382 298 18 58 chr10 128820815 128820855 -16768433 + MER5A DNA MER1_type 144 184 -5 633 288 27 18 chr10 128820930 128821152 -16768136 - MIR SINE MIR -38 224 1 347 291 29 0 chr10 128821158 128821261 -16768027 - MIR SINE MIR -74 134 29 2232 134 0 0 chr10 128821551 128821850 -16767438 - AluSx SINE Alu -12 300 2 2109 130 0 22 chr10 128821979 128822294 -16766994 + AluSc SINE Alu 1 308 -1 206 118 0 29 chr10 128822834 128822868 -16766420 + (TCCC)n Simple_repeat Simple_repeat 3 35 0 375 243 78 10 chr10 128822921 128823024 -16766264 - MIR SINE MIR -22 240 131 181 236 0 42 chr10 128823197 128823269 -16766019 - L2 LINE L2 -420 2894 2826 341 296 35 0 chr10 128823785 128823900 -16765388 - MLT1L LTR MaLR -1 614 496 2156 104 50 3 chr10 128824340 128824637 -16764651 - AluSx SINE Alu -1 311 1 259 365 9 0 chr10 128824731 128824838 -16764450 - MIR SINE MIR -47 215 108 2145 130 10 16 chr10 128824989 128825297 -16763991 - AluSx SINE Alu -6 306 1 1034 119 14 0 chr10 128825297 128825440 -16763848 - AluSq/x SINE Alu -167 145 1 1733 133 70 37 chr10 128825461 128825761 -16763527 + AluJb SINE Alu 3 312 0 1016 180 18 37 chr10 128825781 128825998 -16763290 - MER20 DNA MER1_type 0 219 7 885 208 22 22 chr10 128826009 128826192 -16763096 + MER5A DNA MER1_type 1 183 -6 601 296 38 0 chr10 128826197 128826356 -16762932 + MER5B DNA MER1_type 14 178 0 267 315 190 24 chr10 128827078 128827237 -16762051 + L2 LINE L2 2564 2695 -619 2081 135 0 14 chr10 128827237 128827533 -16761755 + AluSx SINE Alu 9 300 -12 1659 209 85 43 chr10 128827541 128828024 -16761264 - MLT1D LTR MaLR -2 503 1 267 315 190 24 chr10 128828024 128828150 -16761138 + L2 LINE L2 2700 2907 -407 369 245 82 75 chr10 128828175 128828334 -16760954 - MER91A DNA MER1_type -22 174 15 2194 134 0 0 chr10 128828492 128828790 -16760498 - AluSx SINE Alu -14 298 1 187 432 0 0 chr10 128828899 128828980 -16760308 + L2 LINE L2 3134 3214 -58 186 118 0 0 chr10 128829000 128829034 -16760254 + (TGAA)n Simple_repeat Simple_repeat 1 34 0 343 317 35 4 chr10 128829585 128829735 -16759553 + MIR SINE MIR 13 164 -71 378 230 220 47 chr10 128829804 128829995 -16759293 - MIR SINE MIR -7 255 32 2220 128 0 0 chr10 128830205 128830503 -16758785 - AluSq SINE Alu -15 298 1 5569 220 32 17 chr10 128832244 128834412 -16754876 + L1M3f LINE L1 14 2217 -4066 1462 214 78 24 chr10 128834701 128835071 -16754217 + LTR16C LTR ERVL 85 474 -17 2241 116 17 3 chr10 128835175 128835476 -16753812 - AluSx SINE Alu -7 305 1 229 167 0 21 chr10 128835999 128836047 -16753241 - L2 LINE L2 -1 3271 3225 427 308 47 29 chr10 128836367 128836441 -16752847 - MER5B DNA MER1_type 0 178 107 1194 204 10 91 chr10 128836441 128836847 -16752441 - MLT1A2 LTR MaLR -1 373 1 427 308 47 29 chr10 128836847 128836944 -16752344 - MER5B DNA MER1_type -71 107 4 221 290 0 60 chr10 128837897 128837997 -16751291 - MIR SINE MIR -104 158 65 185 272 43 33 chr10 128839209 128839301 -16749987 + L2 LINE L2 3180 3272 0 334 306 65 0 chr10 128839608 128839716 -16749572 + MER69 DNA AcHobo 9 123 -2403 * 615 179 98 29 chr10 128839701 128839874 -16749414 + MER69 DNA AcHobo 2342 2526 0 660 158 176 118 chr10 128840046 128840325 -16748963 - MER51C LTR ERV1 0 640 346 362 211 0 0 chr10 128840775 128840851 -16748437 + MIR SINE MIR 152 227 -35 2411 70 0 41 chr10 128840877 128841191 -16748097 + AluY SINE Alu 1 301 -10 1827 153 37 3 chr10 128841214 128841509 -16747779 - AluJo SINE Alu -7 305 1 1013 104 0 8 chr10 128841511 128841645 -16747643 - AluJo/FLAM SINE Alu -179 133 1 1817 155 86 3 chr10 128842092 128842428 -16746860 + THE1B LTR MaLR 1 364 0 226 266 13 38 chr10 128842692 128842771 -16746517 - MER5B DNA MER1_type -73 105 29 338 292 18 35 chr10 128843472 128843585 -16745703 - L2 LINE L2 -4 3309 3199 410 239 94 0 chr10 128845398 128845515 -16743773 + L2 LINE L2 3144 3271 -1 428 255 186 27 chr10 128845705 128845893 -16743395 - MIR SINE MIR -26 236 19 2312 115 0 0 chr10 128846060 128846355 -16742933 + AluSx SINE Alu 1 295 -17 211 355 65 9 chr10 128846402 128846509 -16742779 + L2 LINE L2 3191 3303 -10 192 227 76 76 chr10 128846795 128846861 -16742427 + MER5C DNA MER1_type 12 77 -247 755 244 46 13 chr10 128846974 128847309 -16741979 - MER31B LTR ERV1 0 466 1 1314 193 137 28 chr10 128847369 128847726 -16741562 + MSTD LTR MaLR 1 396 0 832 191 0 0 chr10 128847908 128848039 -16741249 - FLAM_A SINE Alu -2 131 1 21 36 0 0 chr10 128848904 128848932 -16740356 + AT_rich Low_complexity Low_complexity 1 28 0 1643 205 28 14 chr10 128849250 128849606 -16739682 - MLT1A1 LTR MaLR 0 365 5 852 197 0 5 chr10 128849685 128850103 -16739185 + CT-rich Low_complexity Low_complexity 1 416 0 323 206 29 0 chr10 128850126 128850194 -16739094 - MLT2B3 LTR ERVL -261 293 224 1645 158 8 11 chr10 128850232 128850498 -16738790 - AluJo SINE Alu -22 290 26 817 208 40 5 chr10 128850769 128850971 -16738317 - MLT2B3 LTR ERVL -345 209 1 927 141 0 0 chr10 128851418 128851546 -16737742 + AluSc SINE Alu 167 294 -15 2422 103 19 27 chr10 128851558 128851925 -16737363 + THE1B LTR MaLR 1 364 0 349 298 30 23 chr10 128852655 128852786 -16736502 + MIR3 SINE MIR 51 182 -26 667 177 0 0 chr10 128852904 128853017 -16736271 + AluJb SINE Alu 200 312 0 286 280 169 55 chr10 128854138 128854374 -16734914 - L2 LINE L2 -19 3294 3032 312 236 143 0 chr10 128854583 128854723 -16734565 - L2 LINE L2 -337 2977 2818 205 326 73 55 chr10 128854835 128855108 -16734180 - L2 LINE L2 -437 2877 2600 1531 272 37 21 chr10 128855572 128856545 -16732743 - L1MEc LINE L1 -3426 2789 1845 204 40 0 0 chr10 128857396 128857421 -16731867 + (GA)n Simple_repeat Simple_repeat 2 26 0 204 40 0 0 chr10 128857931 128857956 -16731332 + (GA)n Simple_repeat Simple_repeat 2 26 0 435 344 44 17 chr10 128857959 128858253 -16731035 - L1ME LINE L1 -536 5626 5325 256 374 30 0 chr10 128858568 128858699 -16730589 - MIR SINE MIR -70 192 58 284 264 66 75 chr10 128859262 128859489 -16729799 + Charlie2 DNA MER1_type 98 322 -2540 958 216 100 51 chr10 128859518 128859697 -16729591 + Charlie2 DNA MER1_type 2230 2399 -463 1836 158 14 4 chr10 128859697 128859976 -16729312 - AluJo SINE Alu -25 287 6 1378 114 0 31 chr10 128859981 128860208 -16729080 - L1PA16 LINE L1 -1 6165 5946 958 216 100 51 chr10 128860208 128860610 -16728678 + Charlie2 DNA MER1_type 2402 2846 -16 389 215 86 21 chr10 128860775 128860868 -16728420 + L2 LINE L2 3213 3311 -2 710 251 88 4 chr10 128860872 128861099 -16728189 - MIR SINE MIR -8 254 9 26 64 0 0 chr10 128862466 128862513 -16726775 + GC_rich Low_complexity Low_complexity 1 47 0 2225 126 3 0 chr10 128864181 128864491 -16724797 - AluSx SINE Alu -1 311 1 2170 135 0 0 chr10 128865033 128865345 -16723943 - AluSx SINE Alu 0 312 1 640 184 73 0 chr10 128867027 128867163 -16722125 - MER45A DNA AcHobo 0 178 33 2282 113 0 3 chr10 128868111 128868412 -16720876 - AluSx SINE Alu -11 301 2 285 324 125 40 chr10 128868757 128868933 -16720355 - MIR3 SINE MIR -6 202 12 180 0 0 0 chr10 128869429 128869449 -16719839 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 2010 98 29 11 chr10 128869449 128869724 -16719564 - AluSx SINE Alu -32 280 1 425 302 39 0 chr10 128871782 128871911 -16717377 + MIR3 SINE MIR 70 203 -5 237 187 26 32 chr10 128872134 128872214 -16717074 + MIR SINE MIR 78 143 -65 246 172 95 36 chr10 128873285 128873383 -16715905 + MIR3 SINE MIR 116 221 -41 1830 140 0 78 chr10 128873408 128873741 -16715547 - AluSx SINE Alu 0 309 1 200 311 56 11 chr10 128874086 128874176 -16715112 - MIR SINE MIR -11 251 158 2204 108 0 3 chr10 128875024 128875311 -16713977 + AluSx SINE Alu 5 290 -22 289 298 14 99 chr10 128878910 128879051 -16710237 + MIR3 SINE MIR 74 202 -6 207 200 0 0 chr10 128879061 128879101 -16710187 + (ATG)n Simple_repeat Simple_repeat 3 42 0 406 263 48 27 chr10 128880026 128880212 -16709076 - HAL1 LINE L1 0 2507 2318 1405 78 0 0 chr10 128880222 128880389 -16708899 - AluSg/x SINE Alu -13 299 133 704 262 20 74 chr10 128880407 128880758 -16708530 - HAL1 LINE L1 -203 2304 1973 982 274 149 33 chr10 128880854 128881558 -16707730 - HAL1 LINE L1 -683 1824 1039 480 257 127 108 chr10 128881660 128882076 -16707212 - HAL1 LINE L1 -2083 424 1 671 201 27 7 chr10 128882182 128882331 -16706957 - MER41D LTR ERV1 0 557 406 * 1021 152 0 0 chr10 128882330 128882495 -16706793 - MER41D LTR ERV1 -373 184 20 1143 139 18 67 chr10 128882531 128882650 -16706638 + AluJo SINE Alu 1 105 -207 261 0 0 0 chr10 128882650 128882679 -16706609 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1143 139 18 67 chr10 128882679 128882782 -16706506 + AluJo SINE Alu 105 212 -100 731 88 0 0 chr10 128882782 128882873 -16706415 - AluSp/q SINE Alu -33 280 190 759 169 15 85 chr10 128883207 128883366 -16705922 + L1MB7 LINE L1 5984 6128 -56 2235 109 3 0 chr10 128883366 128883659 -16705629 - AluSg SINE Alu -16 294 1 759 169 15 85 chr10 128883659 128883700 -16705588 + L1MB7 LINE L1 6128 6170 -14 901 159 7 7 chr10 128884121 128884272 -16705016 - AluJb SINE Alu -9 303 153 202 323 52 0 chr10 128885683 128885779 -16703509 + L3 LINE CR1 586 686 -891 825 148 6 119 chr10 128885785 128885961 -16703327 + AluSg/x SINE Alu 137 292 -20 2524 86 0 0 chr10 128887262 128887566 -16701722 + AluSx SINE Alu 1 304 -8 480 147 18 9 chr10 128890262 128890371 -16698917 + (TG)n Simple_repeat Simple_repeat 1 110 0 726 190 0 0 chr10 128890388 128890677 -16698611 + (CA)n Simple_repeat Simple_repeat 1 289 0 320 287 0 32 chr10 128890722 128890816 -16698472 - L1MC4 LINE L1 -1337 6705 6615 276 87 58 29 chr10 128890821 128890890 -16698398 + (CATA)n Simple_repeat Simple_repeat 4 74 0 336 260 48 19 chr10 128890956 128891060 -16698228 + MIR SINE MIR 41 147 -115 243 103 0 0 chr10 128893371 128893410 -16695878 + (TG)n Simple_repeat Simple_repeat 2 40 0 419 195 13 0 chr10 128893525 128893602 -16695686 + MIR SINE MIR 114 191 -71 268 259 309 7 chr10 128897036 128897179 -16692109 + MIR SINE MIR 55 240 -22 1338 206 56 21 chr10 128897462 128897749 -16691539 + AluJb SINE Alu 1 297 -15 2008 159 0 6 chr10 128897783 128898097 -16691191 + AluSx SINE Alu 1 312 0 202 231 0 77 chr10 128898265 128898317 -16690971 + L3 LINE CR1 1519 1566 -11 25 65 0 0 chr10 128898946 128898992 -16690296 + AT_rich Low_complexity Low_complexity 1 46 0 2445 37 54 0 chr10 128902551 128902846 -16686442 + AluY SINE Alu 1 311 0 389 247 143 32 chr10 128903059 128903213 -16686075 - MIR SINE MIR -42 220 50 23 0 0 0 chr10 128906996 128907019 -16682269 + AT_rich Low_complexity Low_complexity 1 23 0 201 139 0 0 chr10 128909841 128909884 -16679404 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 2319 81 3 0 chr10 128909978 128910263 -16679025 - AluSq SINE Alu -27 286 1 288 232 181 58 chr10 128910509 128910647 -16678641 + MER5A DNA MER1_type 35 189 0 21 57 0 0 chr10 128911485 128911520 -16677768 + AT_rich Low_complexity Low_complexity 1 35 0 323 288 139 45 chr10 128912051 128912318 -16676970 - L1ME4a LINE L1 -26 6095 5804 2153 120 0 13 chr10 128912320 128912629 -16676659 - AluJb SINE Alu -7 305 1 2249 85 7 0 chr10 128912708 128913002 -16676286 + AluY SINE Alu 1 296 -15 747 155 0 31 chr10 128913026 128913155 -16676133 + FLAM_A SINE Alu 4 128 -5 443 279 163 63 chr10 128913180 128913499 -16675789 - L3 LINE CR1 -801 776 426 21 0 0 0 chr10 128914580 128914601 -16674687 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 128914695 128914716 -16674572 + AT_rich Low_complexity Low_complexity 1 21 0 231 263 79 53 chr10 128914997 128915111 -16674177 + MLT1H LTR MaLR 2 118 -431 2004 216 123 8 chr10 128915111 128915764 -16673524 + L1M4 LINE L1 2557 3284 -2862 4203 127 37 35 chr10 128915767 128916516 -16672772 + L1MA6 LINE L1 5463 6213 -87 625 165 0 0 chr10 128916516 128916619 -16672669 + AluJb SINE Alu 194 296 -16 380 257 96 0 chr10 128916775 128916911 -16672377 + L1ME1 LINE L1 2557 2705 -3441 4357 206 105 30 chr10 128917027 128918952 -16670336 + L1ME1 LINE L1 3663 5730 -436 417 182 13 0 chr10 128918984 128919061 -16670227 + Tigger5 DNA MER2_type 1 78 -2245 269 200 43 29 chr10 128919062 128919132 -16670156 - Tigger5 DNA MER2_type -4 2319 2249 386 125 0 47 chr10 128919137 128919201 -16670087 + Tigger5 DNA MER2_type 2263 2323 0 515 217 69 4 chr10 128919208 128919342 -16669946 + L1ME1 LINE L1 6032 6330 -4 447 255 84 50 chr10 128919696 128919935 -16669353 - HAL1 LINE L1 -8 2499 2253 249 232 72 29 chr10 128920335 128920404 -16668884 + MER2 DNA MER2_type 1 72 -273 3552 102 51 3 chr10 128920751 128921341 -16667947 - L1PBa LINE L1 -4544 2319 1702 1786 165 35 49 chr10 128922063 128922433 -16666855 + MLT1A1 LTR MaLR 1 365 0 2082 124 24 0 chr10 128922450 128922741 -16666547 - AluSx SINE Alu -14 298 1 500 330 28 44 chr10 128924075 128924093 -16665195 + MER8 DNA MER2_type 1 18 -221 2709 66 0 27 chr10 128924093 128924458 -16664830 + THE1A LTR MaLR 1 355 0 11538 84 19 4 chr10 128924458 128926015 -16663273 + THE1A-int LTR MaLR 1 1580 0 2631 82 8 3 chr10 128926015 128926368 -16662920 + THE1A LTR MaLR 1 355 0 500 330 28 44 chr10 128926368 128926529 -16662759 + MER8 DNA MER2_type 15 179 -60 2062 120 3 3 chr10 128926588 128926895 -16662393 + AluSx SINE Alu 1 307 0 501 62 0 0 chr10 128926897 128926962 -16662326 + (CA)n Simple_repeat Simple_repeat 2 66 0 796 166 62 0 chr10 128927028 128927173 -16662115 - MER46A DNA MER2_type -82 154 1 427 194 113 50 chr10 128927037 128927197 -16662091 + MER46A DNA MER2_type 1 170 -66 * 455 296 83 0 chr10 128927319 128927451 -16661837 + MIR SINE MIR 49 191 -71 1402 172 75 5 chr10 128928127 128928438 -16660850 - L1MD3 LINE L1 0 8042 7726 286 209 58 12 chr10 128928615 128928701 -16660587 + L1ME4a LINE L1 5989 6078 -43 319 330 34 22 chr10 128929503 128929682 -16659606 - L3b LINE CR1 -167 1416 1236 443 257 250 0 chr10 128929932 128930084 -16659204 - MIR SINE MIR -27 235 46 885 251 31 18 chr10 128930110 128930333 -16658955 + MIR SINE MIR 5 230 -32 469 297 64 36 chr10 128931167 128931386 -16657902 - MIR SINE MIR -6 256 32 236 347 61 65 chr10 128931395 128931770 -16657518 + L2 LINE L2 2719 3111 -161 1003 240 121 39 chr10 128933115 128933578 -16655710 - LTR33A LTR ERVL -21 502 2 201 346 58 19 chr10 128933894 128933998 -16655290 - L2 LINE L2 -17 3255 3148 1300 167 87 3 chr10 128934614 128934913 -16654375 + MER33 DNA MER1_type 1 324 0 2156 113 23 0 chr10 128936754 128937055 -16652233 + AluSx SINE Alu 1 308 -4 1679 166 0 53 chr10 128937833 128938153 -16651135 + AluJo SINE Alu 1 303 -9 307 278 21 10 chr10 128938274 128938371 -16650917 + MLT1J LTR MaLR 119 216 -295 335 167 56 14 chr10 128939565 128939637 -16649651 - MER53 DNA DNA -85 104 30 184 273 146 55 chr10 128939646 128939756 -16649532 + L2 LINE L2 3017 3136 -177 418 301 44 0 chr10 128939879 128939992 -16649296 + L2 LINE L2 3196 3313 0 306 0 0 0 chr10 128940836 128940870 -16648418 + (CA)n Simple_repeat Simple_repeat 2 35 0 663 249 48 32 chr10 128940872 128941061 -16648227 + MIR SINE MIR 71 262 0 414 253 63 0 chr10 128941760 128941855 -16647433 + MER99 DNA DNA 2 102 -726 4392 174 60 14 chr10 128941966 128943102 -16646186 + L1MB8 LINE L1 4978 6176 -2 310 127 127 56 chr10 128943549 128943620 -16645668 + LTR54B LTR ERV1 4 79 -419 1073 260 69 31 chr10 128943684 128944003 -16645285 + MER57-int LTR ERV1 1910 2240 -4091 275 224 92 31 chr10 128943979 128944077 -16645211 + MER57-int LTR ERV1 333 436 -7101 * 585 215 19 111 chr10 128944301 128944541 -16644747 + MER57-int LTR ERV1 467 3329 -4208 1870 128 66 0 chr10 128945379 128945668 -16643620 + AluSx SINE Alu 1 308 -4 4114 199 53 63 chr10 128945760 128946838 -16642450 + MER57-int LTR ERV1 2581 3669 -1213 2390 110 0 0 chr10 128946838 128947147 -16642141 - AluSx SINE Alu -3 309 1 4114 199 53 63 chr10 128947147 128947259 -16642029 + MER57-int LTR ERV1 3669 3781 -1101 2165 118 18 32 chr10 128947259 128947639 -16641649 + THE1C LTR MaLR 1 375 0 4114 199 53 63 chr10 128947639 128948009 -16641279 + MER57-int LTR ERV1 3781 4114 -768 380 324 17 23 chr10 128947992 128948048 -16641240 + MER70-int LTR ERVL 3683 3738 -1285 * 381 185 0 0 chr10 128948048 128948113 -16641175 + MER57-int LTR ERV1 4110 4174 -697 380 324 17 23 chr10 128948113 128948165 -16641123 + MER70-int LTR ERVL 3738 3854 -1169 * 2144 220 46 9 chr10 128948157 128948693 -16640595 + MER57-int LTR ERV1 4163 7118 -419 1089 166 237 24 chr10 128948742 128949151 -16640137 + LTR54B LTR ERV1 1 496 -2 1033 219 69 27 chr10 128949344 128949848 -16639440 + MER99 DNA DNA 192 755 -73 1261 167 0 27 chr10 128949848 128950069 -16639219 - AluJb SINE Alu -5 307 93 515 163 101 34 chr10 128950087 128950265 -16639023 + LTR54B LTR ERV1 281 470 -28 408 143 0 0 chr10 128950266 128950329 -16638959 - AluJ/FLAM SINE Alu -249 63 1 262 203 76 25 chr10 128950329 128950408 -16638880 + MER99 DNA DNA 742 824 -4 868 70 86 0 chr10 128950892 128951020 -16638268 + MER85 DNA T2_type 1 139 0 1691 190 0 0 chr10 128951111 128951395 -16637893 + AluJb SINE Alu 5 288 -24 629 100 0 10 chr10 128951395 128951495 -16637793 + (GGGA)n Simple_repeat Simple_repeat 2 100 0 188 331 112 24 chr10 128951696 128951865 -16637423 + L2 LINE L2 2227 2410 -904 222 254 17 0 chr10 128952648 128952707 -16636581 + (TAG)n Simple_repeat Simple_repeat 1 60 0 670 260 45 0 chr10 128952709 128952886 -16636402 - MIR SINE MIR -21 241 57 260 326 69 21 chr10 128953585 128953729 -16635559 - L3b LINE CR1 -122 1461 1311 2402 96 0 0 chr10 128953944 128954246 -16635042 - AluSp SINE Alu -11 302 1 2245 125 3 3 chr10 128954275 128954587 -16634701 + AluSx SINE Alu 1 312 0 269 291 226 25 chr10 128954607 128954806 -16634482 + MIR SINE MIR 2 240 -22 1380 187 0 79 chr10 128955653 128955979 -16633309 + AluJb SINE Alu 1 302 0 804 271 142 41 chr10 128955997 128956300 -16632988 + L1M4c LINE L1 895 1166 -5397 213 94 0 0 chr10 128956300 128956332 -16632956 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 804 271 142 41 chr10 128956332 128956971 -16632317 + L1M4c LINE L1 1166 2081 -4482 982 235 72 107 chr10 128956977 128957424 -16631864 + L1MC4 LINE L1 6105 6443 -1365 1448 148 124 30 chr10 128957424 128957754 -16631534 - MER46B DNA MER2_type 0 236 1 982 235 72 107 chr10 128957754 128958300 -16630988 + L1MC4 LINE L1 6443 7006 -802 1323 81 0 0 chr10 128958391 128958552 -16630736 + AluY SINE Alu 134 294 -17 25 0 0 0 chr10 128958721 128958746 -16630542 + AT_rich Low_complexity Low_complexity 1 25 0 189 214 122 51 chr10 128959243 128959341 -16629947 - MIR SINE MIR -147 115 11 1259 226 97 0 chr10 128960925 128961234 -16628054 + MER58B DNA MER1_type 2 340 -1 502 329 140 34 chr10 128961242 128961534 -16627754 - L2 LINE L2 -422 2892 2570 259 288 0 0 chr10 128961536 128961595 -16627693 + MIR3 SINE MIR 136 194 -14 2598 126 112 2 chr10 128961683 128962120 -16627168 + MER31A LTR ERV1 1 485 0 1843 141 56 3 chr10 128962916 128963235 -16626053 + MER2 DNA MER2_type 1 336 -9 734 264 66 19 chr10 128963332 128963544 -16625744 - MIR SINE MIR -13 249 28 345 62 0 0 chr10 128963821 128963869 -16625419 + (CA)n Simple_repeat Simple_repeat 1 48 0 1993 142 0 39 chr10 128963918 128964228 -16625060 - AluSx SINE Alu -14 298 1 2474 250 73 44 chr10 128965587 128965817 -16623471 + L1M4b LINE L1 11 233 -6626 2513 71 0 0 chr10 128965817 128966126 -16623162 - AluY SINE Alu -2 309 1 2474 250 73 44 chr10 128966126 128967117 -16622171 + L1M4b LINE L1 233 1443 -5416 180 26 53 26 chr10 128967117 128967155 -16622133 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 2474 250 73 44 chr10 128967155 128967213 -16622075 + L1M4b LINE L1 1443 1498 -5361 597 136 9 18 chr10 128967215 128967325 -16621963 - MER4B LTR ERV1 -325 285 177 2430 55 31 0 chr10 128967397 128967690 -16621598 + AluSq SINE Alu 1 302 -11 318 191 0 0 chr10 128967694 128967762 -16621526 + L1M4b LINE L1 1554 1621 -5238 650 142 26 84 chr10 128967767 128967922 -16621366 + MER4B LTR ERV1 1 146 -464 1164 233 39 112 chr10 128967930 128968590 -16620698 + LTR9 LTR ERV1 1 612 0 2631 110 17 13 chr10 128968646 128969083 -16620205 + MER4E LTR ERV1 209 766 0 334 217 0 14 chr10 128969083 128969255 -16620033 + L1M4b LINE L1 1617 1846 -5111 1189 201 7 20 chr10 128969278 128969571 -16619717 + L1MB8 LINE L1 5888 6176 -2 261 251 217 29 chr10 128969721 128969896 -16619392 - MIR SINE MIR -3 259 52 1160 214 56 41 chr10 128969910 128970251 -16619037 - MLT1B LTR MaLR -44 346 1 183 308 13 51 chr10 128970374 128970452 -16618836 - MIR SINE MIR -54 208 134 300 262 189 15 chr10 128970485 128970691 -16618597 + HAL1 LINE L1 1675 1916 -591 1979 159 0 0 chr10 128970959 128971268 -16618020 + AluJo SINE Alu 1 309 -3 1084 231 81 0 chr10 128971472 128971693 -16617595 - MIR SINE MIR -4 258 20 2086 137 7 3 chr10 128971695 128972002 -16617286 - AluSg SINE Alu -2 308 1 2242 76 38 3 chr10 128972060 128972349 -16616939 + AluY SINE Alu 1 299 -12 1959 195 131 39 chr10 128972476 128973117 -16616171 + L1ME3A LINE L1 5469 6168 -2 1853 167 31 3 chr10 128973128 128973416 -16615872 - AluJo SINE Alu -15 297 2 452 257 29 29 chr10 128973766 128973902 -16615386 + L3 LINE CR1 1353 1488 -89 229 406 23 30 chr10 128973928 128974061 -16615227 + MIR SINE MIR 18 149 -59 1186 195 23 33 chr10 128974144 128974447 -16614841 - LTR8A LTR ERV1 0 727 428 235 333 54 0 chr10 128975722 128975815 -16613473 + MIR SINE MIR 159 256 -6 231 379 10 48 chr10 128976871 128976923 -16612365 + L2 LINE L2 3141 3189 -83 743 244 63 31 chr10 128976923 128977177 -16612111 + MIR SINE MIR 1 262 0 231 379 10 48 chr10 128977177 128977227 -16612061 + L2 LINE L2 3189 3239 -33 193 267 0 53 chr10 128977844 128977919 -16611369 - MIR3 SINE MIR -12 196 126 1965 144 7 7 chr10 128978551 128978843 -16610445 + AluSx SINE Alu 3 294 -18 2464 97 0 0 chr10 128978922 128979233 -16610055 + AluSx SINE Alu 1 311 -1 594 214 149 21 chr10 128979248 128979529 -16609759 + L1MC5 LINE L1 7609 7925 -36 183 336 96 7 chr10 128979620 128979766 -16609522 + MIR SINE MIR 91 249 -13 556 51 13 13 chr10 128979769 128979848 -16609440 - MADE1 DNA Mariner 0 80 2 535 322 6 22 chr10 128980081 128980261 -16609027 + MIR SINE MIR 45 221 -41 1947 142 0 3 chr10 128980544 128980832 -16608456 + AluJb SINE Alu 1 287 -25 2255 116 3 3 chr10 128980840 128981150 -16608138 + AluSx SINE Alu 1 310 -2 22 0 0 0 chr10 128982178 128982200 -16607088 + AT_rich Low_complexity Low_complexity 1 22 0 615 201 0 7 chr10 128982274 128982413 -16606875 - Charlie1 DNA MER1_type -1 2760 2623 * 814 206 83 44 chr10 128982402 128982630 -16606658 - Charlie1 DNA MER1_type -2524 237 1 1870 122 42 39 chr10 128983118 128983455 -16605833 - MER2 DNA MER2_type -6 339 2 357 86 0 0 chr10 128985593 128985651 -16603637 + (TG)n Simple_repeat Simple_repeat 2 59 0 222 128 0 0 chr10 128985868 128985907 -16603381 + (CA)n Simple_repeat Simple_repeat 2 40 0 496 272 179 0 chr10 128985990 128986163 -16603125 - L2 LINE L2 -280 3033 2830 268 203 54 27 chr10 128986303 128986377 -16602911 + GA-rich Low_complexity Low_complexity 3 78 0 291 155 310 93 chr10 128987899 128987961 -16601327 - MER58C DNA MER1_type -2205 215 168 438 108 0 0 chr10 128987961 128988026 -16601262 + (CCA)n Simple_repeat Simple_repeat 1 65 0 291 155 310 93 chr10 128988026 128988092 -16601196 - MER58C DNA MER1_type -2252 168 59 1872 133 7 0 chr10 128988551 128988848 -16600440 + AluSx SINE Alu 12 310 0 1748 114 88 0 chr10 128989071 128989333 -16599955 + AluSq SINE Alu 9 293 -20 2034 99 85 0 chr10 128990263 128990545 -16598743 - AluSx SINE Alu -6 306 1 207 0 0 0 chr10 128990556 128990579 -16598709 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2241 112 0 0 chr10 128990583 128990870 -16598418 - AluSx SINE Alu -25 287 1 301 271 32 83 chr10 128991032 128991250 -16598038 - MER102a DNA MER1_type -3 327 121 28 61 0 0 chr10 128991506 128991555 -16597733 + AT_rich Low_complexity Low_complexity 1 49 0 818 133 8 0 chr10 128991971 128992091 -16597197 + AluSq/x SINE Alu 1 121 -192 297 0 0 0 chr10 128992330 128992363 -16596925 + (TG)n Simple_repeat Simple_repeat 2 34 0 374 188 14 0 chr10 128992400 128992469 -16596819 + MIR SINE MIR 71 140 -122 246 310 111 51 chr10 128992517 128992579 -16596709 - L3 LINE CR1 -32 1545 1488 237 65 0 0 chr10 128992579 128992610 -16596678 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2047 117 0 0 chr10 128992612 128992894 -16596394 - AluSx SINE Alu -30 282 1 246 310 111 51 chr10 128992894 128993044 -16596244 - L3 LINE CR1 -89 1488 1317 1727 151 16 44 chr10 128993063 128993380 -16595908 + AluJo SINE Alu 2 309 -3 386 303 34 0 chr10 128993406 128993525 -16595763 + L2 LINE L2 3189 3311 -2 2130 96 0 68 chr10 128994885 128995209 -16594079 + AluSx SINE Alu 1 302 -10 235 236 14 28 chr10 128996637 128996709 -16592579 + C-rich Low_complexity Low_complexity 6 76 0 318 291 119 58 chr10 128996733 128996994 -16592294 - L1M2 LINE L1 -5801 1048 772 2337 77 3 0 chr10 128998141 128998438 -16590850 + AluSg SINE Alu 1 298 -12 1952 164 39 0 chr10 128999346 128999681 -16589607 + MER7A DNA MER2_type 1 346 0 265 353 99 4 chr10 129001896 129002148 -16587140 + L2 LINE L2 1731 2006 -1308 585 216 27 0 chr10 129002320 129002431 -16586857 + MER81 DNA DNA 1 114 0 4264 164 28 65 chr10 129002597 129003482 -16585806 - L1MB7 LINE L1 0 6184 5376 906 196 0 0 chr10 129003482 129003635 -16585653 - FRAM SINE Alu -10 156 4 4264 164 28 65 chr10 129003635 129004323 -16584965 - L1MB7 LINE L1 -808 5376 4665 1245 110 0 0 chr10 129005610 129005774 -16583514 - AluSg/x SINE Alu -15 297 134 2210 114 3 0 chr10 129005774 129006072 -16583216 - AluSx SINE Alu -13 299 1 2092 147 102 31 chr10 129006201 129006623 -16582665 - LTR47A LTR ERVL 0 452 1 1271 207 50 91 chr10 129006648 129007064 -16582224 + MLT1J LTR MaLR 3 401 -110 187 365 168 22 chr10 129007104 129007468 -16581820 + L2 LINE L2 2362 2778 -536 271 289 145 13 chr10 129007492 129007644 -16581644 - MIR SINE MIR -38 224 53 955 150 126 24 chr10 129007981 129008188 -16581100 + MER96B DNA MER1_type? 190 417 0 206 211 0 58 chr10 129008269 129008321 -16580967 + L2 LINE L2 3265 3313 0 314 287 0 30 chr10 129008352 129008453 -16580835 + L2 LINE L2 2964 3061 -211 198 103 0 0 chr10 129008702 129008731 -16580557 + (TGGA)n Simple_repeat Simple_repeat 4 32 0 231 337 125 15 chr10 129008762 129008848 -16580440 - L2 LINE L2 -642 2672 2597 3988 108 57 0 chr10 129008848 129009449 -16579839 - LTR24C LTR ERV1 0 635 1 231 337 125 15 chr10 129009449 129009626 -16579662 - L2 LINE L2 -717 2597 2380 237 346 30 0 chr10 129009680 129009781 -16579507 - MIR SINE MIR -86 122 19 257 315 112 30 chr10 129010157 129010604 -16578684 + L2 LINE L2 2550 3054 -218 654 268 134 78 chr10 129010673 129011150 -16578138 + MLT1J LTR MaLR 1 504 -7 369 267 11 0 chr10 129011188 129011278 -16578010 + L2 LINE L2 3182 3272 0 1770 277 67 28 chr10 129011592 129012165 -16577123 + L2 LINE L2 2154 2762 -552 2112 183 35 54 chr10 129012165 129012680 -16576608 + MLT1D LTR MaLR 1 505 0 1770 277 67 28 chr10 129012680 129012821 -16576467 + L2 LINE L2 2762 2896 -418 242 70 70 0 chr10 129013631 129013674 -16575614 + T-rich Low_complexity Low_complexity 1 46 0 1975 117 35 3 chr10 129013695 129013978 -16575310 - AluSx SINE Alu -20 292 1 780 263 72 93 chr10 129014042 129014513 -16574775 + MLT1K LTR MaLR 124 584 -4 184 272 24 128 chr10 129014694 129014819 -16574469 + L2 LINE L2 2709 2820 -494 21 0 0 0 chr10 129014833 129014854 -16574434 + AT_rich Low_complexity Low_complexity 1 21 0 1828 152 0 52 chr10 129014859 129015188 -16574100 - AluJb SINE Alu 0 312 1 404 167 14 174 chr10 129015188 129015326 -16573962 - MER58B DNA MER1_type -9 332 217 229 256 0 0 chr10 129015302 129015341 -16573947 - MER58B DNA MER1_type -302 39 1 * 374 293 124 51 chr10 129015377 129015787 -16573501 + L2 LINE L2 2873 3312 -1 306 312 0 0 chr10 129015787 129015864 -16573424 + GA-rich Low_complexity Low_complexity 2 78 0 349 287 10 0 chr10 129016205 129016306 -16572982 + MIR SINE MIR 47 148 -114 5495 98 36 36 chr10 129016306 129017160 -16572128 + L1PA15 LINE L1 5312 6165 0 387 205 134 0 chr10 129017164 129017276 -16572012 + MIR SINE MIR 136 262 0 306 132 294 0 chr10 129017322 129017390 -16571898 - Zaphod DNA AcHobo 0 4031 3944 1341 167 72 19 chr10 129017405 129017502 -16571786 + AluJo SINE Alu 24 114 -198 180 0 0 0 chr10 129017502 129017522 -16571766 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1341 167 72 19 chr10 129017522 129017688 -16571600 + AluJo SINE Alu 114 301 -11 922 221 121 18 chr10 129017705 129018035 -16571253 - Zaphod DNA AcHobo -78 3953 3590 * 3330 211 43 38 chr10 129018026 129018190 -16571098 - Zaphod DNA AcHobo -3041 990 828 2177 112 21 0 chr10 129018190 129018477 -16570811 + AluSc SINE Alu 1 293 -16 2270 108 0 10 chr10 129018478 129018785 -16570503 + AluSx SINE Alu 1 304 -8 3330 211 43 38 chr10 129018785 129019519 -16569769 - Zaphod DNA AcHobo -3203 828 82 1747 141 199 14 chr10 129019519 129019880 -16569408 - MSTA LTR MaLR 0 428 1 3330 211 43 38 chr10 129019880 129019904 -16569384 - Zaphod DNA AcHobo -3949 82 60 2295 104 3 0 chr10 129020228 129020525 -16568763 - AluSp SINE Alu -15 298 1 508 237 43 7 chr10 129020791 129020930 -16568358 - MIR SINE MIR -115 147 4 1748 130 6 91 chr10 129021387 129021718 -16567570 + AluSx SINE Alu 1 303 -9 3831 183 31 18 chr10 129021738 129022685 -16566603 - L1MB7 LINE L1 -10 6174 5240 207 0 0 0 chr10 129022685 129022708 -16566580 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1966 145 3 3 chr10 129022711 129022994 -16566294 - AluJb SINE Alu -29 283 1 3831 183 31 18 chr10 129022994 129023393 -16565895 - L1MB7 LINE L1 -945 5239 4767 2214 128 0 3 chr10 129023393 129023691 -16565597 - AluSx SINE Alu -15 297 1 3831 183 31 18 chr10 129023691 129023706 -16565582 - L1MB7 LINE L1 -1417 4767 4754 225 361 46 19 chr10 129023789 129023897 -16565391 + L2 LINE L2 3101 3211 -61 581 213 7 21 chr10 129023978 129024119 -16565169 + AluSg/x SINE Alu 173 311 -1 2339 112 0 0 chr10 129025130 129025435 -16563853 - AluSx SINE Alu -7 305 1 2415 78 0 7 chr10 129025478 129025773 -16563515 + AluY SINE Alu 1 293 -18 2295 102 3 0 chr10 129026066 129026360 -16562928 - AluSp SINE Alu -18 295 1 265 277 58 65 chr10 129026371 129026526 -16562762 + MER103 DNA DNA 8 161 -5 2085 143 7 3 chr10 129026905 129027213 -16562075 + AluSx SINE Alu 1 309 -3 2256 134 0 0 chr10 129027428 129027735 -16561553 + AluSx SINE Alu 1 307 -5 2363 71 0 0 chr10 129027743 129028079 -16561209 + AluY SINE Alu 1 336 0 187 165 68 146 chr10 129029003 129029078 -16560210 + MIR SINE MIR 141 207 -55 2181 129 0 0 chr10 129029078 129029381 -16559907 + AluSx SINE Alu 1 303 -9 187 165 68 146 chr10 129029381 129029408 -16559880 + MIR SINE MIR 207 235 -27 1367 234 108 10 chr10 129029710 129030128 -16559160 + MLT1C LTR MaLR 6 464 -3 242 270 66 111 chr10 129031176 129031554 -16557734 - L2 LINE L2 -5 3308 2948 213 65 0 0 chr10 129031610 129031641 -16557647 + (CA)n Simple_repeat Simple_repeat 2 32 0 21 0 0 0 chr10 129032879 129032900 -16556388 + AT_rich Low_complexity Low_complexity 1 21 0 651 87 0 0 chr10 129033585 129033689 -16555599 + (CTGTG)n Simple_repeat Simple_repeat 4 107 0 331 174 0 35 chr10 129034455 129034541 -16554747 + MIR SINE MIR 124 206 -56 669 179 142 89 chr10 129034543 129034789 -16554499 - MER112 DNA MER1_type 0 260 2 416 270 34 45 chr10 129034917 129035002 -16554286 + Charlie8 DNA MER1_type 1 85 -256 2188 94 3 0 chr10 129035002 129035290 -16553998 + AluSc SINE Alu 17 305 -4 416 270 34 45 chr10 129035290 129035382 -16553906 + Charlie8 DNA MER1_type 85 176 -165 386 302 39 17 chr10 129035517 129035696 -16553592 - MIR3 SINE MIR -15 193 11 24 0 0 0 chr10 129036236 129036260 -16553028 + AT_rich Low_complexity Low_complexity 1 24 0 2400 109 3 0 chr10 129036283 129036594 -16552694 + AluSp SINE Alu 1 312 -1 225 275 11 33 chr10 129036609 129036700 -16552588 - L1MC4 LINE L1 -26 8016 7928 306 137 0 82 chr10 129036717 129036790 -16552498 - L1ME1 LINE L1 -4 6162 6096 659 121 12 84 chr10 129036797 129036963 -16552325 - L1MC4 LINE L1 0 8042 7889 1354 180 128 0 chr10 129036990 129037271 -16552017 + AluJb SINE Alu 2 314 0 2598 155 80 2 chr10 129037272 129037711 -16551577 - MER31A LTR ERV1 -12 473 1 736 205 92 27 chr10 129037740 129037925 -16551363 - L1ME2 LINE L1 -54 6110 5914 373 254 18 0 chr10 129037945 129038055 -16551233 - L1MC5 LINE L1 -178 7783 7672 264 261 96 17 chr10 129038069 129038094 -16551194 - MIR SINE MIR -79 183 161 2235 123 0 0 chr10 129038094 129038396 -16550892 - AluSx SINE Alu -10 302 1 264 261 96 17 chr10 129038396 129038485 -16550803 - MIR SINE MIR -101 161 60 2130 135 56 0 chr10 129039897 129040237 -16549051 + MER46B DNA MER2_type 2 235 -1 2110 111 17 10 chr10 129040969 129041267 -16548021 + AluSx SINE Alu 4 303 -9 463 309 24 39 chr10 129041350 129041557 -16547731 - MIR SINE MIR -10 252 49 2005 93 14 18 chr10 129042948 129043228 -16546060 - AluSx SINE Alu -13 299 21 338 188 0 59 chr10 129044127 129044212 -16545076 + MLT1K LTR MaLR 201 280 -308 268 213 16 0 chr10 129044378 129044439 -16544849 + MLT1K LTR MaLR 521 582 -6 348 365 8 8 chr10 129044719 129044870 -16544418 + MIR SINE MIR 33 182 -62 396 265 29 88 chr10 129044970 129045242 -16544046 - L2 LINE L2 0 3313 3058 2367 60 3 17 chr10 129045820 129046118 -16543170 - AluY SINE Alu -17 294 1 259 293 115 52 chr10 129046477 129046668 -16542620 + MLT1K LTR MaLR 188 390 -198 418 266 30 69 chr10 129046918 129047002 -16542286 - MLT1K LTR MaLR -7 581 495 2042 125 49 0 chr10 129047002 129047290 -16541998 + AluSx SINE Alu 1 302 -10 418 266 30 69 chr10 129047290 129047408 -16541880 - MLT1K LTR MaLR -93 495 387 5249 75 1 14 chr10 129047727 129048395 -16540893 + PABL_A LTR ERV1 1 660 0 2375 104 13 0 chr10 129048536 129048844 -16540444 + AluSx SINE Alu 1 312 0 345 307 134 17 chr10 129049413 129049592 -16539696 + L1MC4a LINE L1 5705 5904 -1904 2504 74 0 3 chr10 129049719 129050029 -16539259 - AluY SINE Alu -2 309 1 1241 117 0 0 chr10 129050900 129051063 -16538225 - AluSg/x SINE Alu -16 296 134 438 238 72 80 chr10 129051357 129051573 -16537715 - MIR SINE MIR -32 230 21 1848 159 3 53 chr10 129051613 129051786 -16537502 - AluJo SINE Alu -5 307 156 4385 51 0 0 chr10 129051786 129052313 -16536975 - L1PA7 LINE L1 -4 6150 5624 1848 159 3 53 chr10 129052313 129052460 -16536828 - AluJo SINE Alu -156 156 3 264 197 49 0 chr10 129053115 129053176 -16536112 + HAL1 LINE L1 2444 2507 0 444 237 244 13 chr10 129053327 129053483 -16535805 - MIR SINE MIR -70 192 1 208 313 36 12 chr10 129054227 129054310 -16534978 + MIR3 SINE MIR 118 202 -6 399 89 0 0 chr10 129054811 129054867 -16534421 + (CA)n Simple_repeat Simple_repeat 2 57 0 1630 188 39 20 chr10 129055207 129055564 -16533724 - L1MB8 LINE L1 -6 6172 5809 865 253 74 25 chr10 129055742 129056066 -16533222 - LTR16A LTR ERVL -14 436 97 927 231 24 69 chr10 129056187 129056272 -16533016 + MIR SINE MIR 27 114 -148 1913 126 14 3 chr10 129056272 129056558 -16532730 + AluSx SINE Alu 12 300 -12 927 231 24 69 chr10 129056558 129056719 -16532569 + MIR SINE MIR 114 262 0 1882 158 14 0 chr10 129057096 129057380 -16531908 + AluJb SINE Alu 1 288 -24 653 207 15 30 chr10 129057659 129057794 -16531494 + MIR SINE MIR 44 176 -86 319 247 150 0 chr10 129058136 129058247 -16531041 - MIR SINE MIR -63 145 30 2355 89 7 3 chr10 129058516 129058818 -16530470 + AluSg SINE Alu 1 303 -7 2357 85 0 0 chr10 129059057 129059362 -16529926 - AluY SINE Alu 0 305 1 248 0 31 0 chr10 129059497 129059529 -16529759 + (TC)n Simple_repeat Simple_repeat 2 34 0 558 206 47 53 chr10 129059609 129059779 -16529509 + MER117 DNA MER1_type 1 169 -28 1509 242 28 84 chr10 129060073 129060121 -16529167 + MLT1H1 LTR MaLR 66 115 -440 1925 128 7 43 chr10 129060121 129060425 -16528863 - AluJb SINE Alu -19 293 1 1509 242 28 84 chr10 129060425 129060923 -16528365 + MLT1H1 LTR MaLR 115 555 0 265 304 125 65 chr10 129060925 129061109 -16528179 - L2 LINE L2 -57 3215 3021 1248 116 77 24 chr10 129061385 129061592 -16527696 - MER20 DNA MER1_type 0 219 2 1754 174 0 43 chr10 129062053 129062375 -16526913 - AluJo SINE Alu -3 309 2 180 0 0 0 chr10 129062475 129062495 -16526793 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 1904 134 0 34 chr10 129062497 129062789 -16526499 - AluSx SINE Alu -30 282 1 308 307 0 0 chr10 129064926 129065014 -16524274 + MER117 DNA MER1_type 4 91 -106 1823 145 118 48 chr10 129065096 129065454 -16523834 + MSTA LTR MaLR 1 391 -37 2144 133 7 0 chr10 129065454 129065763 -16523525 - AluSx SINE Alu -1 311 1 1823 145 118 48 chr10 129065763 129065804 -16523484 + MSTA LTR MaLR 391 428 0 473 299 27 43 chr10 129066017 129066204 -16523084 - MIR3 SINE MIR -15 193 10 1960 198 35 47 chr10 129066263 129066774 -16522514 - MLT1D LTR MaLR 0 505 1 1246 154 74 64 chr10 129066943 129066996 -16522292 - L1MB7 LINE L1 -19 6165 6114 2164 125 0 0 chr10 129066996 129067329 -16521959 + AluSx SINE Alu 1 333 0 1246 154 74 64 chr10 129067329 129067584 -16521704 - L1MB7 LINE L1 -70 6114 5852 559 287 47 96 chr10 129068059 129068526 -16520762 - MLT1K LTR MaLR -4 584 141 275 311 126 0 chr10 129069036 129069171 -16520117 - MIR SINE MIR -77 185 34 208 250 270 20 chr10 129069737 129069837 -16519451 + L2 LINE L2 3186 3310 -3 230 54 0 27 chr10 129069841 129069878 -16519410 + (TGGA)n Simple_repeat Simple_repeat 3 38 0 405 202 138 18 chr10 129070569 129070678 -16518610 + MIR3 SINE MIR 41 162 -46 884 263 14 104 chr10 129071051 129071485 -16517803 - MLT1J LTR MaLR -92 419 25 754 321 46 4 chr10 129071504 129071741 -16517547 - MIR SINE MIR 0 262 16 2136 120 0 0 chr10 129071814 129072136 -16517152 - AluSq SINE Alu 0 322 1 291 85 0 0 chr10 129072737 129072784 -16516504 + (ATTG)n Simple_repeat Simple_repeat 2 48 0 2212 112 3 0 chr10 129072784 129073069 -16516219 - AluSq SINE Alu -27 286 1 395 189 9 85 chr10 129073121 129073227 -16516061 - MIR SINE MIR -106 156 59 25 0 0 0 chr10 129073698 129073723 -16515565 + AT_rich Low_complexity Low_complexity 1 25 0 2319 105 3 6 chr10 129073732 129074045 -16515243 + AluSq SINE Alu 1 312 -1 1280 240 145 11 chr10 129074115 129074556 -16514732 + MLT1J LTR MaLR 1 500 -11 2368 98 48 28 chr10 129074915 129075272 -16514016 - THE1B LTR MaLR 0 364 1 313 218 11 161 chr10 129075807 129075981 -16513307 - MLT1L LTR MaLR -466 149 2 408 292 162 7 chr10 129076181 129076335 -16512953 + MER5A DNA MER1_type 7 184 -5 790 165 73 161 chr10 129077238 129077577 -16511711 - MER4C LTR ERV1 0 465 179 2129 94 22 0 chr10 129077577 129077878 -16511410 + AluSx SINE Alu 1 307 0 790 165 73 161 chr10 129077878 129078027 -16511261 - MER4C LTR ERV1 -286 179 19 229 272 107 10 chr10 129078518 129078621 -16510667 - MIR SINE MIR -70 192 80 196 281 53 18 chr10 129079220 129079277 -16510011 + MER5A DNA MER1_type 46 104 -85 310 287 96 13 chr10 129079920 129080077 -16509211 - MIR SINE MIR -77 185 16 198 333 0 0 chr10 129080179 129080236 -16509052 + MIR SINE MIR 204 260 -2 506 245 6 49 chr10 129080494 129080667 -16508621 - MIR SINE MIR -63 145 30 275 296 43 43 chr10 129080704 129080819 -16508469 - MIR3 SINE MIR -23 185 71 2705 14 0 0 chr10 129081002 129081329 -16507959 + AluYb8 SINE Alu 1 327 0 1360 129 21 0 chr10 129081332 129081526 -16507762 + AluJb SINE Alu 1 198 -114 1505 219 63 50 chr10 129081529 129081972 -16507316 - LTR2 LTR ERV1 0 449 1 2033 117 0 63 chr10 129081976 129082309 -16506979 + AluJb SINE Alu 1 312 0 406 260 147 33 chr10 129082328 129082541 -16506747 + MIR SINE MIR 17 262 0 444 265 33 60 chr10 129082554 129082705 -16506583 + L2 LINE L2 3115 3261 -11 286 298 111 49 chr10 129082734 129082954 -16506334 - MIR SINE MIR -27 235 10 190 238 0 0 chr10 129084077 129084119 -16505169 + L2 LINE L2 2600 2641 -673 396 235 121 54 chr10 129084519 129084668 -16504620 + MIR SINE MIR 30 188 -74 246 255 43 21 chr10 129084670 129084764 -16504524 - MLT1H LTR MaLR 0 549 454 333 228 152 14 chr10 129084962 129085107 -16504181 - MLT1H LTR MaLR -384 165 1 286 293 105 83 chr10 129085587 129085816 -16503472 + L2 LINE L2 3038 3271 -1 2430 107 0 0 chr10 129087117 129087426 -16501862 - AluSx SINE Alu -1 311 3 1734 202 45 65 chr10 129087435 129087946 -16501342 + MLT2B1 LTR ERVL 20 520 0 669 264 60 60 chr10 129088895 129089130 -16500158 + MIR SINE MIR 24 258 -4 1827 118 75 73 chr10 129089228 129089600 -16499688 - THE1C LTR MaLR -2 373 1 1454 193 149 65 chr10 129090089 129090506 -16498782 + MLT2B1 LTR ERVL 1 464 -56 2150 131 3 0 chr10 129090506 129090803 -16498485 - AluSx SINE Alu -12 300 3 1454 193 149 65 chr10 129090803 129090862 -16498426 + MLT2B1 LTR ERVL 464 517 -3 668 266 18 74 chr10 129091833 129091926 -16497362 + Charlie1 DNA MER1_type 7 104 -2657 2278 109 0 16 chr10 129091926 129092237 -16497051 + AluSx SINE Alu 2 307 -5 668 266 18 74 chr10 129092237 129092372 -16496916 + Charlie1 DNA MER1_type 104 222 -2539 665 150 0 8 chr10 129092375 129092508 -16496780 + Charlie1 DNA MER1_type 2624 2755 -6 1316 174 56 0 chr10 129092728 129092998 -16496290 - L1MB3 LINE L1 -2 6181 5897 455 246 88 23 chr10 129093158 129093329 -16495959 + MIR SINE MIR 7 188 -74 409 314 60 54 chr10 129093347 129093678 -16495610 - L2 LINE L2 -385 2929 2597 523 305 82 51 chr10 129094548 129094902 -16494386 - MLT1K LTR MaLR 0 588 224 330 322 40 20 chr10 129094931 129095133 -16494155 - L2 LINE L2 -447 2867 2662 1976 131 3 39 chr10 129095308 129095613 -16493675 - AluSq SINE Alu -16 297 4 2185 121 3 7 chr10 129095688 129095986 -16493302 + AluSx SINE Alu 1 297 -15 1272 199 80 39 chr10 129096028 129096390 -16492898 + MSTB1 LTR MaLR 55 431 -1 586 197 52 134 chr10 129097206 129097475 -16491813 + L1MC4a LINE L1 5629 5875 -1933 207 114 0 0 chr10 129097885 129097920 -16491368 + (TG)n Simple_repeat Simple_repeat 1 35 0 264 30 0 0 chr10 129098002 129098035 -16491253 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 329 225 59 28 chr10 129099914 129100023 -16489265 + MIR SINE MIR 107 216 -42 233 324 56 0 chr10 129100051 129100122 -16489166 + L2 LINE L2 3190 3264 -49 2316 103 0 17 chr10 129100497 129100798 -16488490 - AluSx SINE Alu -16 296 1 491 255 85 40 chr10 129100905 129101105 -16488183 - MIR SINE MIR -20 242 34 1789 140 84 0 chr10 129102407 129102693 -16486595 + AluSx SINE Alu 1 310 -2 365 285 61 24 chr10 129102857 129103022 -16486266 - MIR3 SINE MIR -19 189 19 2230 92 0 10 chr10 129103096 129103402 -16485886 + AluSq SINE Alu 1 303 -10 180 0 0 0 chr10 129103822 129103842 -16485446 + (GGGA)n Simple_repeat Simple_repeat 4 23 0 474 273 128 65 chr10 129103942 129104326 -16484962 + L1MC4a LINE L1 5523 5930 -1878 350 283 146 49 chr10 129104787 129105232 -16484056 - L2 LINE L2 -10 3303 2816 301 280 9 9 chr10 129105623 129105730 -16483558 - MLT1J LTR MaLR 0 511 405 1238 241 32 29 chr10 129105771 129106082 -16483206 - MLT1J LTR MaLR -199 312 1 640 252 13 6 chr10 129106083 129106242 -16483046 + MER103 DNA DNA 7 166 0 2261 87 3 0 chr10 129106936 129107234 -16482054 + AluSx SINE Alu 1 299 -13 1384 221 59 78 chr10 129107468 129107944 -16481344 - MLT1C LTR MaLR 0 467 1 206 226 88 98 chr10 129108472 129108495 -16480793 + L2 LINE L2 2992 3014 -258 2279 167 45 45 chr10 129108495 129108613 -16480675 - MLT1C LTR MaLR 0 467 350 2195 110 0 3 chr10 129108613 129108913 -16480375 - AluSx SINE Alu -13 299 1 2279 167 45 45 chr10 129108913 129109261 -16480027 - MLT1C LTR MaLR -116 351 1 206 226 88 98 chr10 129109261 129109339 -16479949 + L2 LINE L2 3014 3092 -180 2304 87 0 0 chr10 129109881 129110180 -16479108 - AluSx SINE Alu -13 299 1 367 235 6 6 chr10 129110329 129110491 -16478797 + (TG)n Simple_repeat Simple_repeat 1 162 0 770 238 45 15 chr10 129110842 129111044 -16478244 + MIR SINE MIR 44 251 -11 411 235 76 34 chr10 129111121 129111240 -16478048 + L2 LINE L2 3149 3272 0 429 245 238 7 chr10 129111606 129111749 -16477539 + MER5A DNA MER1_type 7 182 -7 890 267 79 58 chr10 129113192 129113675 -16475613 - LTR33 LTR ERVL -7 514 22 754 277 162 15 chr10 129114115 129114454 -16474834 - MLT1I LTR MaLR -3 406 18 501 232 78 0 chr10 129115843 129115985 -16473303 - L1ME4a LINE L1 -3 6118 5966 261 318 119 0 chr10 129116026 129116152 -16473136 - L2 LINE L2 -2 3311 3171 2781 234 92 8 chr10 129116162 129117029 -16472259 + L1M4 LINE L1 2826 3765 -2381 209 283 71 40 chr10 129117135 129117234 -16472054 + MIR SINE MIR 105 206 -56 812 133 37 15 chr10 129117278 129117413 -16471875 - FLAM_C SINE Alu -1 142 5 743 268 92 58 chr10 129117493 129118029 -16471259 + L2 LINE L2 2774 3313 0 2233 73 0 20 chr10 129118498 129118800 -16470488 - AluSq SINE Alu -17 296 1 468 268 101 12 chr10 129119102 129119270 -16470018 - MIR SINE MIR -1 261 79 424 165 22 11 chr10 129119339 129119430 -16469858 - MIR3 SINE MIR -35 173 82 1495 136 104 24 chr10 129119513 129119800 -16469488 - AluJo SINE Alu -2 310 1 1061 195 13 87 chr10 129120074 129120372 -16468916 - MER33 DNA MER1_type 0 324 49 527 267 81 0 chr10 129121248 129121420 -16467868 + MIR SINE MIR 13 198 -64 339 170 40 70 chr10 129121542 129121642 -16467646 + L1MC4a LINE L1 5811 5907 -1901 203 306 9 9 chr10 129122398 129122509 -16466779 + (CA)n Simple_repeat Simple_repeat 2 112 0 334 260 19 48 chr10 129123591 129123695 -16465593 + MIR3 SINE MIR 100 200 -8 483 254 42 0 chr10 129126271 129126389 -16462899 - MIR SINE MIR -17 245 123 227 345 9 45 chr10 129126782 129126835 -16462453 - MIR3 SINE MIR 0 208 160 539 226 102 48 chr10 129126835 129127021 -16462267 - MER117 DNA MER1_type 0 197 2 227 345 9 45 chr10 129127021 129127077 -16462211 - MIR3 SINE MIR -48 160 103 1875 135 7 10 chr10 129128379 129128676 -16460612 - AluSx SINE Alu -16 296 1 670 184 109 7 chr10 129128808 129128955 -16460333 + MIR SINE MIR 74 235 -27 2134 184 11 11 chr10 129128976 129129410 -16459878 + L1MB8 LINE L1 5744 6177 -1 2391 57 0 3 chr10 129129422 129129723 -16459565 + AluY SINE Alu 1 300 -11 414 273 50 0 chr10 129129855 129129976 -16459312 + MIR SINE MIR 117 243 -19 404 338 38 19 chr10 129130381 129130538 -16458750 + MIR3 SINE MIR 23 182 -26 1110 180 104 24 chr10 129130789 129131078 -16458210 + MLT1C LTR MaLR 6 317 -150 395 157 0 72 chr10 129131415 129131498 -16457790 - L2 LINE L2 -1 3312 3236 2093 113 0 0 chr10 129131760 129132068 -16457220 - AluSq SINE Alu 0 308 1 443 257 56 42 chr10 129132235 129132379 -16456909 - L2 LINE L2 -5 3308 3163 282 350 36 50 chr10 129132487 129132764 -16456524 - L2 LINE L2 -43 3270 2998 243 274 26 53 chr10 129132899 129133012 -16456276 - MIR3 SINE MIR -96 112 3 523 168 0 140 chr10 129133882 129134025 -16455263 + MIR SINE MIR 70 192 -70 464 344 16 32 chr10 129134430 129134616 -16454672 + MIR SINE MIR 35 217 -45 303 351 86 39 chr10 129134653 129134989 -16454299 + L2 LINE L2 2918 3269 -3 1722 179 3 0 chr10 129135270 129135578 -16453710 + AluJb SINE Alu 1 309 -3 274 180 20 0 chr10 129137025 129137075 -16452213 - L2 LINE L2 -6 3307 3257 883 169 38 16 chr10 129137196 129137380 -16451908 - MER53 DNA DNA 0 189 2 464 276 0 37 chr10 129137484 129137511 -16451777 - MIR SINE MIR -55 207 181 2757 92 0 16 chr10 129137511 129137881 -16451407 - THE1B LTR MaLR 0 364 1 464 276 0 37 chr10 129137881 129137987 -16451301 - MIR SINE MIR -81 181 79 716 297 135 15 chr10 129138646 129138986 -16450302 + L2 LINE L2 2933 3313 0 2166 100 13 0 chr10 129139069 129139370 -16449918 - AluY SINE Alu -6 305 1 1937 143 7 0 chr10 129139978 129140279 -16449009 - AluJo SINE Alu -9 303 1 201 222 48 63 chr10 129140330 129140393 -16448895 + L2 LINE L2 3153 3214 -58 821 189 17 23 chr10 129142319 129142494 -16446794 + AluJo SINE Alu 121 294 -18 781 244 97 32 chr10 129142510 129142911 -16446377 + L1ME4a LINE L1 5538 5964 -157 260 282 92 8 chr10 129142985 129143116 -16446172 + L1ME4a LINE L1 5977 6118 -3 379 290 103 55 chr10 129143205 129144229 -16445059 + L1M4 LINE L1 4330 5403 -743 22 0 0 0 chr10 129144563 129144585 -16444703 + AT_rich Low_complexity Low_complexity 1 22 0 2555 103 5 44 chr10 129144616 129145003 -16444285 + THE1C LTR MaLR 1 372 -3 307 159 129 69 chr10 129145122 129145233 -16444055 - MIR SINE MIR -89 119 19 410 280 20 67 chr10 129145667 129145817 -16443471 - MIR SINE MIR -55 207 65 347 291 0 0 chr10 129146257 129146336 -16442952 + L2 LINE L2 3193 3271 -1 251 259 145 30 chr10 129146784 129146915 -16442373 - MIR3 SINE MIR -2 206 61 282 275 90 56 chr10 129147700 129147933 -16441355 - L1MC4a LINE L1 -1889 5919 5679 323 263 9 79 chr10 129147936 129148050 -16441238 - L1MC4 LINE L1 -1323 6719 6614 279 0 0 0 chr10 129148056 129148087 -16441201 + (GA)n Simple_repeat Simple_repeat 2 32 0 560 213 56 0 chr10 129148166 129148274 -16441014 + L2 LINE L2 3195 3308 -5 590 266 90 15 chr10 129148447 129148663 -16440625 + MIR SINE MIR 27 256 -6 187 357 98 9 chr10 129149665 129149777 -16439511 + L2 LINE L2 3116 3237 -35 2368 56 0 13 chr10 129149816 129150119 -16439169 - AluY SINE Alu -12 299 1 198 0 0 0 chr10 129150725 129150747 -16438541 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 842 217 77 14 chr10 129150778 129151030 -16438258 - L1ME1 LINE L1 0 6166 5896 1371 118 5 14 chr10 129151132 129151344 -16437944 - AluSg/x SINE Alu -10 302 93 337 116 0 30 chr10 129151345 129151412 -16437876 - Alu SINE Alu -259 44 1 369 0 0 0 chr10 129151518 129151559 -16437729 + (TA)n Simple_repeat Simple_repeat 2 42 0 420 20 0 0 chr10 129151909 129151958 -16437330 + (CA)n Simple_repeat Simple_repeat 2 50 0 256 309 36 27 chr10 129152385 129152495 -16436793 + MIR SINE MIR 92 202 -60 515 282 53 39 chr10 129152727 129152933 -16436355 + MIR SINE MIR 21 229 -33 269 244 0 39 chr10 129157288 129157366 -16431922 + MIR SINE MIR 105 179 -83 200 262 319 0 chr10 129159568 129159709 -16429579 - MIR SINE MIR -3 259 74 699 157 67 45 chr10 129160104 129160282 -16429006 - MIR SINE MIR -10 252 71 506 241 16 15 chr10 129160315 129160467 -16428821 - L1ME1 LINE L1 -7 6155 6004 203 208 169 13 chr10 129160494 129160571 -16428717 - MIR SINE MIR -122 140 52 278 123 18 0 chr10 129162986 129163043 -16426245 + (TAA)n Simple_repeat Simple_repeat 3 60 0 585 181 0 0 chr10 129163689 129163822 -16425466 + GA-rich Low_complexity Low_complexity 1 133 0 414 57 0 0 chr10 129164297 129164350 -16424938 + (A)n Simple_repeat Simple_repeat 1 53 0 238 43 64 43 chr10 129164470 129164517 -16424771 + CT-rich Low_complexity Low_complexity 1 48 0 198 0 0 0 chr10 129164515 129164537 -16424751 + (CCCCCA)n Simple_repeat Simple_repeat 3 24 0 * 22 0 0 0 chr10 129164808 129164830 -16424458 + GC_rich Low_complexity Low_complexity 1 22 0 498 129 0 0 chr10 129169875 129169960 -16419328 + (GA)n Simple_repeat Simple_repeat 1 85 0 220 347 0 0 chr10 129171995 129172070 -16417218 + CT-rich Low_complexity Low_complexity 4 78 0 502 286 29 57 chr10 129177956 129178131 -16411157 - MER91A DNA MER1_type -2 194 25 2415 74 0 0 chr10 129178669 129178979 -16410309 + AluY SINE Alu 1 310 -1 216 0 0 0 chr10 129180049 129180073 -16409215 + (TTCC)n Simple_repeat Simple_repeat 3 26 0 2142 113 0 0 chr10 129180173 129180464 -16408824 - AluSx SINE Alu -21 291 1 296 319 67 14 chr10 129180470 129180680 -16408608 + L1MC4a LINE L1 5690 5910 -1898 377 312 54 59 chr10 129180796 129181017 -16408271 - L3 LINE CR1 -400 1177 958 394 332 61 28 chr10 129181017 129181231 -16408057 - L3 LINE CR1 -19 1558 1338 857 225 0 11 chr10 129181371 129181553 -16407735 + MLT1B LTR MaLR 1 180 -210 765 160 0 0 chr10 129181563 129181694 -16407594 + FLAM_C SINE Alu 13 143 0 917 219 13 52 chr10 129181697 129181930 -16407358 + MLT1B LTR MaLR 164 387 -3 379 294 56 25 chr10 129181934 129182094 -16407194 - L1MC5 LINE L1 -121 7840 7676 626 229 0 8 chr10 129184250 129184744 -16404544 + (TG)n Simple_repeat Simple_repeat 1 489 0 587 199 6 3 chr10 129184784 129185136 -16404152 + (TG)n Simple_repeat Simple_repeat 1 353 0 662 248 21 84 chr10 129185743 129185981 -16403307 - MIR SINE MIR -5 257 35 349 239 119 40 chr10 129187026 129187181 -16402107 + MIR SINE MIR 70 229 -33 417 325 19 32 chr10 129187266 129187423 -16401865 + MIR3 SINE MIR 3 157 -51 310 104 0 0 chr10 129187869 129187917 -16401371 + MER53 DNA DNA 4 51 -138 354 202 133 42 chr10 129188321 129188439 -16400849 + MIR SINE MIR 70 192 -61 192 250 0 0 chr10 129188706 129188746 -16400542 - MIR SINE MIR -116 146 107 214 374 0 17 chr10 129189060 129189175 -16400113 - L2 LINE L2 -17 3255 3143 185 71 0 0 chr10 129189301 129189329 -16399959 - L2 LINE L2 -218 3054 3027 243 284 129 35 chr10 129190129 129190245 -16399043 - MIR3 SINE MIR -16 192 66 273 318 34 14 chr10 129190250 129190441 -16398847 + MIR SINE MIR 14 259 -3 280 372 64 26 chr10 129191014 129191170 -16398118 - MIR SINE MIR -79 183 22 382 249 30 83 chr10 129191922 129192091 -16397197 - MIR SINE MIR -55 207 48 521 227 150 63 chr10 129192553 129192760 -16396528 + LTR16A1 LTR ERVL 178 402 -55 1842 149 10 10 chr10 129192788 129193077 -16396211 - AluSx SINE Alu -17 295 7 1037 251 85 13 chr10 129193432 129193739 -16395549 - LTR16A LTR ERVL -31 419 91 194 325 123 9 chr10 129193884 129193998 -16395290 - L2 LINE L2 -1 3312 3186 437 285 171 31 chr10 129194055 129194283 -16395005 - MIR SINE MIR -2 260 1 512 222 8 48 chr10 129194622 129194748 -16394540 + MER63A DNA MER1_type 55 175 -35 302 266 73 90 chr10 129195093 129195270 -16394018 - MIR SINE MIR -39 223 50 1549 159 52 17 chr10 129195422 129195712 -16393576 + AluJo SINE Alu 1 300 -12 261 262 22 48 chr10 129196462 129196594 -16392694 - MER5A DNA MER1_type -46 132 8 289 338 95 0 chr10 129196610 129196758 -16392530 - MER5A DNA MER1_type 0 189 28 536 253 56 12 chr10 129196782 129196944 -16392344 + MIR SINE MIR 89 257 -5 236 381 9 9 chr10 129196988 129197093 -16392195 - L2 LINE L2 0 3272 3168 232 321 18 0 chr10 129198000 129198118 -16391170 + (CATATA)n Simple_repeat Simple_repeat 1 120 0 395 250 118 20 chr10 129198232 129198408 -16390880 - MIR3 SINE MIR -62 146 1 533 255 181 0 chr10 129198984 129199133 -16390155 + MER45A DNA AcHobo 3 178 0 863 249 210 51 chr10 129199712 129200141 -16389147 - LTR33A LTR ERVL 0 523 27 1881 163 3 0 chr10 129200260 129200567 -16388721 + AluJb SINE Alu 1 308 -4 323 303 64 0 chr10 129200624 129200733 -16388555 - MIR SINE MIR -77 185 70 2537 220 59 34 chr10 129201097 129201153 -16388135 - L1ME LINE L1 -681 5483 5430 1845 172 13 0 chr10 129201153 129201461 -16387827 - AluJb SINE Alu 0 312 1 2537 220 59 34 chr10 129201461 129202103 -16387185 - L1ME LINE L1 -734 5430 4746 509 0 16 0 chr10 129202103 129202164 -16387124 + (TCTA)n Simple_repeat Simple_repeat 4 65 0 2537 220 59 34 chr10 129202164 129202423 -16386865 - L1ME LINE L1 -1418 4746 4495 330 238 0 57 chr10 129202696 129202818 -16386470 - L1M LINE L1 -2383 5425 5311 964 328 131 21 chr10 129202948 129203694 -16385594 + L3 LINE CR1 747 1574 -3 2087 126 0 0 chr10 129203965 129204267 -16385021 - AluSx SINE Alu -10 302 1 548 158 0 0 chr10 129204353 129204435 -16384853 - AluJ/FLAM SINE Alu -227 85 4 207 321 75 19 chr10 129204623 129204729 -16384559 + L2 LINE L2 3141 3252 -20 1783 137 7 17 chr10 129204736 129205028 -16384260 - AluJo SINE Alu -7 305 17 263 276 122 86 chr10 129205781 129206002 -16383286 + MLT1I LTR MaLR 72 300 -109 3189 90 23 0 chr10 129206095 129206529 -16382759 - L1PA10 LINE L1 -15 6153 5710 384 269 86 42 chr10 129206805 129207059 -16382229 + MLT1H LTR MaLR 21 320 -229 344 195 81 23 chr10 129207132 129207219 -16382069 + MLT1H LTR MaLR 458 549 0 224 292 15 0 chr10 129207257 129207322 -16381966 - L2 LINE L2 0 3272 3207 327 268 113 42 chr10 129207673 129207815 -16381473 - MIR SINE MIR -55 207 56 224 273 9 0 chr10 129208097 129208207 -16381081 + (TCCA)n Simple_repeat Simple_repeat 1 111 0 241 254 0 0 chr10 129208207 129208262 -16381026 + (CAAT)n Simple_repeat Simple_repeat 3 57 0 588 328 104 43 chr10 129208370 129208653 -16380635 + L2 LINE L2 2455 2720 -593 2199 125 0 0 chr10 129208653 129208964 -16380324 + AluSq SINE Alu 1 311 -2 588 328 104 43 chr10 129208964 129209470 -16379818 + L2 LINE L2 2720 3294 -19 402 252 83 70 chr10 129210837 129211067 -16378221 - L1MC4a LINE L1 -1844 5964 5732 2124 161 40 37 chr10 129212000 129212550 -16376738 - MLT2A2 LTR ERVL 0 554 1 199 176 29 0 chr10 129212550 129212584 -16376704 + MIR SINE MIR 158 192 -70 882 156 30 40 chr10 129213474 129213703 -16375585 + L1M3 LINE L1 5486 5713 -441 412 287 101 0 chr10 129213739 129213868 -16375420 + MIR SINE MIR 121 262 0 1528 166 7 37 chr10 129213931 129214227 -16375061 - AluJo SINE Alu -8 304 18 3660 189 72 42 chr10 129214269 129215244 -16374044 + L1MC4 LINE L1 7039 8042 0 521 322 10 39 chr10 129215318 129215526 -16373762 - MIR SINE MIR -46 216 15 470 352 82 13 chr10 129215529 129215762 -16373526 - MIR SINE MIR -5 257 9 836 243 35 4 chr10 129216822 129217048 -16372240 - LTR33 LTR ERVL -7 514 282 234 270 100 0 chr10 129217143 129217243 -16372045 - LTR33 LTR ERVL -379 142 33 212 333 108 0 chr10 129217295 129217388 -16371900 - MER91A DNA MER1_type -6 190 88 * 218 369 12 0 chr10 129217374 129217458 -16371830 - MER91A DNA MER1_type -38 158 74 315 206 52 66 chr10 129217512 129217648 -16371640 + MER112 DNA MER1_type 75 208 -52 399 286 121 29 chr10 129217847 129218053 -16371235 + MIR SINE MIR 38 262 0 335 319 69 98 chr10 129218553 129218870 -16370418 + L2 LINE L2 2964 3271 -1 1777 173 3 3 chr10 129219081 129219387 -16369901 - AluJb SINE Alu -6 306 1 414 300 88 58 chr10 129219512 129219909 -16369379 - L1ME4a LINE L1 -6 6115 5707 297 243 29 48 chr10 129220982 129221085 -16368203 + MIR3 SINE MIR 65 165 -43 1677 142 7 28 chr10 129222902 129223190 -16366098 + AluJo SINE Alu 1 282 -30 373 248 5 42 chr10 129223211 129223363 -16365925 - L1ME1 LINE L1 -328 5850 5703 285 370 43 11 chr10 129225256 129225440 -16363848 + MIR SINE MIR 61 250 -12 825 284 106 19 chr10 129226682 129227059 -16362229 + MLT1K LTR MaLR 175 584 -4 508 128 10 10 chr10 129227467 129227569 -16361719 + (TTCC)n Simple_repeat Simple_repeat 3 104 0 1976 108 0 7 chr10 129227569 129227848 -16361440 - AluSc SINE Alu -32 277 1 445 247 27 34 chr10 129228236 129228382 -16360906 - MLT1K LTR MaLR -74 514 370 198 0 0 0 chr10 129229189 129229211 -16360077 + (CAA)n Simple_repeat Simple_repeat 2 23 0 239 222 200 22 chr10 129229322 129229412 -16359876 + MIR SINE MIR 43 148 -60 1964 98 39 14 chr10 129229493 129229778 -16359510 + AluSx SINE Alu 1 292 -20 31 0 0 0 chr10 129229778 129229809 -16359479 + AT_rich Low_complexity Low_complexity 1 31 0 317 256 100 0 chr10 129230024 129230145 -16359143 + MIR3 SINE MIR 40 177 -51 1818 104 12 0 chr10 129230194 129230495 -16358793 + AluSx SINE Alu 29 332 0 235 222 0 19 chr10 129230586 129230640 -16358648 + L2 LINE L2 3220 3272 0 273 263 57 39 chr10 129231977 129232132 -16357156 - MIR3 SINE MIR -16 192 30 25 31 0 0 chr10 129232417 129232449 -16356839 + AT_rich Low_complexity Low_complexity 1 32 0 268 91 0 0 chr10 129232449 129232482 -16356806 - Alu SINE Alu -15 287 255 260 246 0 0 chr10 129232719 129232780 -16356508 + L2 LINE L2 3211 3271 -1 2410 190 29 6 chr10 129233077 129233588 -16355700 - L1MB3 LINE L1 0 6183 5661 794 68 40 23 chr10 129233593 129233770 -16355518 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 222 37 0 0 chr10 129233770 129233797 -16355491 + (CCTA)n Simple_repeat Simple_repeat 2 28 0 298 136 203 0 chr10 129233802 129233861 -16355427 - L1MB3 LINE L1 -687 5647 5577 523 284 159 10 chr10 129234209 129234417 -16354871 + MIR SINE MIR 5 243 -19 1354 239 4 111 chr10 129235269 129235281 -16354007 - L2 LINE L2 -6 3307 3295 2081 108 0 3 chr10 129235281 129235567 -16353721 - AluSx SINE Alu -16 296 12 1354 239 4 111 chr10 129235567 129236094 -16353194 - L2 LINE L2 -18 3295 2826 907 208 10 26 chr10 129236190 129236382 -16352906 + MER58A DNA MER1_type 2 190 -34 1762 51 0 9 chr10 129236393 129236607 -16352681 - AluY SINE Alu -24 287 76 568 287 149 0 chr10 129236632 129236827 -16352461 + MIR SINE MIR 5 228 -34 224 311 14 0 chr10 129236899 129236973 -16352315 + MIR SINE MIR 80 154 -108 1306 108 15 0 chr10 129238011 129238206 -16351082 + L1PB1 LINE L1 5951 6148 -3 234 208 21 0 chr10 129238907 129238955 -16350333 + MIR SINE MIR 103 151 -111 1518 200 87 44 chr10 129239535 129239680 -16349608 + MLT1C LTR MaLR 6 143 -324 4274 92 4 2 chr10 129239680 129240233 -16349055 + MER41A LTR ERV1 1 554 0 1518 200 87 44 chr10 129240233 129240522 -16348766 + MLT1C LTR MaLR 143 459 -8 393 39 0 0 chr10 129241325 129241376 -16347912 + (TG)n Simple_repeat Simple_repeat 2 52 0 240 293 246 11 chr10 129241832 129242023 -16347265 + MIR SINE MIR 16 251 -11 435 308 38 22 chr10 129242060 129242245 -16347043 - MIR SINE MIR -62 200 13 238 323 0 0 chr10 129242475 129242540 -16346748 + (CA)n Simple_repeat Simple_repeat 1 65 0 214 298 0 0 chr10 129243070 129243117 -16346171 + C-rich Low_complexity Low_complexity 4 50 0 349 252 231 20 chr10 129243805 129243952 -16345336 + MER5B DNA MER1_type 1 178 0 422 272 104 17 chr10 129244346 129244519 -16344769 - MIR SINE MIR -48 214 27 2143 245 105 43 chr10 129244983 129245828 -16343460 - L1ME3A LINE L1 -12 6158 5261 709 294 71 13 chr10 129245986 129246364 -16342924 - L1ME3A LINE L1 -946 5200 4801 1807 155 49 30 chr10 129246572 129246939 -16342349 - THE1C LTR MaLR -1 374 1 830 230 138 5 chr10 129246941 129247158 -16342130 - MIR SINE MIR -14 248 3 401 312 52 29 chr10 129247201 129247374 -16341914 + MIR3 SINE MIR 27 203 -5 249 224 47 109 chr10 129247988 129248180 -16341108 - L1ME4a LINE L1 -18 6103 5924 192 197 28 14 chr10 129248180 129248251 -16341037 + (CATATA)n Simple_repeat Simple_repeat 5 76 0 2027 103 13 20 chr10 129248274 129248576 -16340712 - AluSq SINE Alu -13 300 1 302 309 48 24 chr10 129248953 129249079 -16340209 - MIR SINE MIR -113 149 21 1969 133 0 0 chr10 129249643 129249929 -16339359 + AluSx SINE Alu 1 286 -26 438 298 96 0 chr10 129250387 129250565 -16338723 - L1MC5 LINE L1 -54 7907 7713 383 229 36 50 chr10 129250796 129250936 -16338352 - MER113 DNA MER1_type? -77 444 307 216 191 43 0 chr10 129250966 129251013 -16338275 + CT-rich Low_complexity Low_complexity 4 52 0 1910 166 78 24 chr10 129251024 129251555 -16337733 - MLT2A2 LTR ERVL 0 554 1 430 222 53 63 chr10 129251555 129251760 -16337528 - MER113 DNA MER1_type? -240 281 79 395 253 72 30 chr10 129251813 129251979 -16337309 - L1ME4a LINE L1 -350 5771 5599 2106 120 3 0 chr10 129252307 129252616 -16336672 + AluSx SINE Alu 1 310 -2 394 320 0 15 chr10 129252864 129253023 -16336265 - MIR SINE MIR -61 147 44 250 249 40 49 chr10 129255156 129255272 -16334016 - MIR SINE MIR -90 118 3 230 359 28 0 chr10 129255408 129255514 -16333774 + MIR SINE MIR 34 142 -66 * 414 261 45 0 chr10 129255512 129255623 -16333665 - L2 LINE L2 0 3313 3198 967 270 141 16 chr10 129255928 129256298 -16332990 - LTR16C LTR ERVL 0 491 76 338 237 115 41 chr10 129256359 129256636 -16332652 + L2 LINE L2 2925 3291 -22 2218 114 3 16 chr10 129258152 129258459 -16330829 + AluSx SINE Alu 1 303 -9 304 238 0 24 chr10 129258644 129258728 -16330560 + (TATATG)n Simple_repeat Simple_repeat 4 85 0 7243 219 90 32 chr10 129258878 129262145 -16327143 - L1MD3 LINE L1 -112 8678 5602 2006 110 36 0 chr10 129262145 129262426 -16326862 - AluSx SINE Alu -21 291 1 7243 219 90 32 chr10 129262426 129262852 -16326436 - L1MD3 LINE L1 -3188 5602 5202 2005 152 7 3 chr10 129262852 129263162 -16326126 - AluJb SINE Alu -1 311 1 7243 219 90 32 chr10 129263162 129263636 -16325652 - L1MD3 LINE L1 -3588 5202 4246 1340 205 22 29 chr10 129263637 129263938 -16325350 + AluJo SINE Alu 12 310 0 2234 229 33 12 chr10 129263939 129264611 -16324677 - L1MD3 LINE L1 -2692 4249 3564 817 205 35 12 chr10 129264658 129264829 -16324459 - AluJo SINE Alu -18 294 120 2866 255 68 36 chr10 129264830 129266394 -16322894 - L1MD3 LINE L1 -3386 3555 1990 518 277 5 27 chr10 129266433 129266617 -16322671 - L1MD3 LINE L1 -6219 204 25 612 292 58 22 chr10 129266642 129266815 -16322473 - L1ME LINE L1 -320 5801 5613 2284 115 0 6 chr10 129266815 129267129 -16322159 + AluSx SINE Alu 1 312 0 612 292 58 22 chr10 129267129 129267232 -16322056 - L1ME LINE L1 -508 5613 5515 328 324 88 15 chr10 129269243 129269379 -16319909 - MIR3 SINE MIR -60 148 3 180 0 0 0 chr10 129269560 129269580 -16319708 + (A)n Simple_repeat Simple_repeat 1 20 0 386 314 9 49 chr10 129270030 129270253 -16319035 + L1MC/D LINE L1 5563 5776 -2032 2861 246 68 18 chr10 129271386 129272221 -16317067 - L1MEc LINE L1 -5486 910 34 215 296 156 30 chr10 129273670 129273805 -16315483 + L2 LINE L2 3158 3309 -4 201 74 0 0 chr10 129274605 129274632 -16314656 + (A)n Simple_repeat Simple_repeat 1 27 0 180 0 0 0 chr10 129275363 129275383 -16313905 + (A)n Simple_repeat Simple_repeat 1 20 0 548 211 90 26 chr10 129275458 129275614 -16313674 - MIR3 SINE MIR -6 202 37 952 221 108 101 chr10 129275636 129276062 -16313226 - MLT1H LTR MaLR -6 543 115 207 0 0 0 chr10 129276069 129276092 -16313196 + (GA)n Simple_repeat Simple_repeat 2 24 0 242 259 0 0 chr10 129276973 129277031 -16312257 - L2 LINE L2 -219 3053 2996 32 26 0 0 chr10 129277656 129277695 -16311593 + AT_rich Low_complexity Low_complexity 1 39 0 483 87 0 0 chr10 129277867 129277936 -16311352 + (TCTA)n Simple_repeat Simple_repeat 4 72 0 264 59 0 0 chr10 129277977 129278011 -16311277 + (CAAT)n Simple_repeat Simple_repeat 3 36 0 848 230 84 44 chr10 129278047 129278343 -16310945 - HAL1b LINE L1 -198 1150 843 1250 235 88 80 chr10 129278373 129279113 -16310175 - HAL1b LINE L1 -596 752 7 329 256 50 8 chr10 129279218 129279339 -16309949 - L1MC4 LINE L1 -1 8041 7916 1902 166 3 3 chr10 129279454 129279761 -16309527 + AluJb SINE Alu 1 307 -5 2944 199 64 25 chr10 129280012 129280696 -16308592 - L1ME2 LINE L1 -10 6154 5444 1903 247 67 2 chr10 129281038 129281570 -16307718 - L1ME1 LINE L1 0 6166 5601 1923 177 0 0 chr10 129282051 129282356 -16306932 - AluSx SINE Alu -7 305 1 21 0 0 0 chr10 129282356 129282377 -16306911 + AT_rich Low_complexity Low_complexity 1 21 0 499 229 88 93 chr10 129282849 129283054 -16306234 - MER102a DNA MER1_type -1 329 126 2387 67 13 25 chr10 129283081 129283395 -16305893 - AluSg SINE Alu 0 310 1 542 214 0 10 chr10 129283950 129284053 -16305235 + MER58 DNA MER1_type 1 102 -113 306 70 0 0 chr10 129284070 129284113 -16305175 + MER58 DNA MER1_type 2365 2407 -13 317 214 143 0 chr10 129284876 129284974 -16304314 + MIR3 SINE MIR 49 160 -48 1195 209 5 5 chr10 129285702 129285917 -16303371 - MER58A DNA MER1_type -9 215 1 190 360 81 0 chr10 129286234 129286370 -16302918 - L3b LINE CR1 -324 1259 1113 418 270 40 71 chr10 129286669 129286921 -16302367 - L2 LINE L2 -182 3131 2888 654 211 54 24 chr10 129287057 129287223 -16302065 - MIR SINE MIR -71 191 21 2273 153 55 12 chr10 129287301 129287508 -16301780 - MSTB LTR MaLR -10 416 219 225 0 0 0 chr10 129287508 129287533 -16301755 + (GA)n Simple_repeat Simple_repeat 2 26 0 2273 153 55 12 chr10 129287533 129287724 -16301564 - MSTB LTR MaLR -207 219 1 340 312 186 17 chr10 129287760 129287991 -16301297 - L2 LINE L2 -86 3186 2917 538 268 98 0 chr10 129288172 129288336 -16300952 + MIR SINE MIR 33 212 -50 183 343 47 29 chr10 129288444 129288826 -16300462 - L2 LINE L2 -667 2647 2259 251 337 0 0 chr10 129288963 129289046 -16300242 - MIR SINE MIR -64 144 62 390 309 164 0 chr10 129289898 129290099 -16299189 - MIR SINE MIR -23 239 6 199 247 206 41 chr10 129291305 129291402 -16297886 - L2 LINE L2 0 3272 3160 2394 115 21 44 chr10 129292171 129292555 -16296733 - THE1C LTR MaLR 0 375 1 194 333 143 0 chr10 129292622 129292727 -16296561 - MIR3 SINE MIR -75 133 14 216 387 67 0 chr10 129293764 129293958 -16295330 + L2 LINE L2 2851 3057 -215 194 307 99 0 chr10 129294119 129294220 -16295068 + MIR3 SINE MIR 49 159 -49 589 269 31 0 chr10 129295083 129295243 -16294045 - MIR SINE MIR -78 184 20 207 100 0 0 chr10 129295382 129295412 -16293876 + (TG)n Simple_repeat Simple_repeat 1 30 0 212 95 71 0 chr10 129296723 129296765 -16292523 + A-rich Low_complexity Low_complexity 4 48 0 238 288 76 17 chr10 129297357 129297475 -16291813 - MIR SINE MIR -9 253 129 678 238 81 0 chr10 129297483 129297693 -16291595 - MIR SINE MIR -2 260 34 399 279 143 36 chr10 129297690 129297941 -16291347 + L2 LINE L2 2990 3267 -5 * 210 71 0 0 chr10 129298028 129298056 -16291232 + (T)n Simple_repeat Simple_repeat 1 28 0 317 280 154 7 chr10 129298590 129298733 -16290555 - MIR SINE MIR -52 210 47 387 297 96 68 chr10 129299589 129299983 -16289305 + MLT1I LTR MaLR 4 408 -1 392 266 11 21 chr10 129300196 129300290 -16288998 + L2 LINE L2 3137 3229 -43 211 241 111 37 chr10 129300301 129300409 -16288879 - MIR SINE MIR -72 136 21 560 233 14 7 chr10 129300573 129300719 -16288569 + MIR SINE MIR 78 224 -38 2301 84 0 0 chr10 129300736 129301020 -16288268 + AluSx SINE Alu 19 302 -10 344 276 61 25 chr10 129301267 129301430 -16287858 - MIR3 SINE MIR -30 178 10 1106 196 29 5 chr10 129301476 129301685 -16287603 + MER20 DNA MER1_type 1 214 -5 344 275 42 28 chr10 129301843 129301985 -16287303 - MIR SINE MIR -71 191 48 2384 85 3 0 chr10 129303379 129303672 -16285616 + AluSq SINE Alu 1 294 -19 563 299 151 27 chr10 129303692 129303990 -16285298 + L2 LINE L2 2938 3272 0 592 274 25 6 chr10 129304245 129304402 -16284886 - MER5B DNA MER1_type -12 166 7 243 283 9 28 chr10 129304438 129304544 -16284744 - MIR SINE MIR -57 151 48 2351 163 23 77 chr10 129304798 129305276 -16284012 + LTR32 LTR ERVL 20 471 0 438 20 0 0 chr10 129306812 129306863 -16282425 + (CA)n Simple_repeat Simple_repeat 1 51 0 443 165 33 22 chr10 129307811 129307902 -16281386 - MLT1K LTR MaLR 0 588 497 233 203 0 34 chr10 129309005 129309064 -16280224 + (TAA)n Simple_repeat Simple_repeat 1 57 0 380 284 244 6 chr10 129309074 129309250 -16280038 - MIR SINE MIR -14 248 31 522 227 73 31 chr10 129309251 129309467 -16279821 + L1MC4a LINE L1 5698 5924 -254 706 201 40 180 chr10 129309673 129309866 -16279422 + MIR SINE MIR 14 158 -104 713 180 135 45 chr10 129309866 129310066 -16279222 - MER20 DNA MER1_type 0 219 2 706 201 40 180 chr10 129310066 129310150 -16279138 + MIR SINE MIR 158 252 -10 200 355 20 26 chr10 129310222 129310374 -16278914 + MIR3 SINE MIR 8 158 -50 450 250 52 0 chr10 129311357 129311473 -16277815 - MIR3 SINE MIR -6 202 81 232 278 0 0 chr10 129311475 129311529 -16277759 + MIR SINE MIR 86 139 -123 270 288 136 8 chr10 129312057 129312175 -16277113 + MIR SINE MIR 2 134 -128 2086 133 0 0 chr10 129312178 129312478 -16276810 - AluSx SINE Alu -12 300 1 225 0 0 0 chr10 129312673 129312698 -16276590 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 718 314 35 24 chr10 129312738 129313111 -16276177 - L1ME3A LINE L1 -225 5945 5569 328 338 90 8 chr10 129313130 129313263 -16276025 + MIR SINE MIR 119 262 0 188 248 171 57 chr10 129313535 129313564 -16275724 + MER5A DNA MER1_type 49 73 -116 6081 106 18 18 chr10 129313564 129314649 -16274639 - L1PA14 LINE L1 -1 6160 5070 188 248 171 57 chr10 129314649 129314724 -16274564 + MER5A DNA MER1_type 73 165 -24 * 485 245 28 0 chr10 129314650 129314756 -16274532 - MER5A DNA MER1_type -77 112 4 22 0 0 0 chr10 129315570 129315592 -16273696 + AT_rich Low_complexity Low_complexity 1 22 0 211 339 45 36 chr10 129316008 129316120 -16273168 + MIR SINE MIR 28 140 -122 1277 207 7 48 chr10 129316384 129316679 -16272609 - AluJo SINE Alu -29 283 1 2258 159 10 23 chr10 129316739 129317112 -16272176 + MLT1B LTR MaLR 1 370 -20 1708 148 62 51 chr10 129317112 129317483 -16271805 + THE1C LTR MaLR 1 375 0 2258 159 10 23 chr10 129317483 129317504 -16271784 + MLT1B LTR MaLR 370 390 0 28 0 0 0 chr10 129318690 129318718 -16270570 + AT_rich Low_complexity Low_complexity 1 28 0 632 244 92 64 chr10 129318742 129318922 -16270366 + L1ME4a LINE L1 5590 5764 -357 1268 183 9 9 chr10 129318922 129319146 -16270142 + MER58A DNA MER1_type 1 224 0 632 244 92 64 chr10 129319146 129319197 -16270091 + L1ME4a LINE L1 5764 5812 -309 1951 116 0 42 chr10 129319197 129319508 -16269780 - AluSx SINE Alu -14 298 1 632 244 92 64 chr10 129319508 129319570 -16269718 + L1ME4a LINE L1 5812 5892 -229 441 284 52 38 chr10 129319714 129319925 -16269363 - MIR SINE MIR -8 254 41 310 224 0 0 chr10 129319928 129319995 -16269293 + L1ME4a LINE L1 5957 6023 -98 471 279 52 70 chr10 129320025 129320497 -16268791 - MLT1J LTR MaLR -19 492 30 2198 191 24 34 chr10 129320909 129321375 -16267913 + MLT1C LTR MaLR 6 466 -1 1686 134 74 0 chr10 129321749 129322033 -16267255 + AluSx SINE Alu 1 305 -7 205 184 26 0 chr10 129322335 129322373 -16266915 + MIR SINE MIR 56 94 -168 334 213 80 0 chr10 129323584 129323659 -16265629 + MER91A DNA MER1_type 113 193 -3 448 305 114 29 chr10 129323822 129324032 -16265256 - MIR SINE MIR -6 256 29 1687 255 71 70 chr10 129324143 129324873 -16264415 - L1ME3A LINE L1 -13 6157 5427 259 286 241 0 chr10 129325304 129325416 -16263872 + MIR SINE MIR 107 245 -17 672 224 75 0 chr10 129325420 129325581 -16263707 - MER96 DNA MER1_type -2 173 1 450 238 170 7 chr10 129325712 129325859 -16263429 - MER112 DNA MER1_type -89 171 1 770 242 31 6 chr10 129326054 129326259 -16263029 + MIR SINE MIR 18 226 -36 231 125 0 0 chr10 129326833 129326865 -16262423 + MSTC LTR MaLR 2 33 -395 * 1725 154 15 4 chr10 129326862 129327135 -16262153 + MSTC LTR MaLR 153 428 0 1592 130 8 0 chr10 129327967 129328221 -16261067 - L1MA7 LINE L1 0 6291 6036 357 286 76 8 chr10 129328529 129328648 -16260640 + MIR SINE MIR 28 154 -108 277 306 52 52 chr10 129328698 129328871 -16260417 - MLT1J LTR MaLR -42 469 297 436 210 32 0 chr10 129328912 129329036 -16260252 + (CAGAGA)n Simple_repeat Simple_repeat 5 132 0 227 268 0 0 chr10 129329074 129329130 -16260158 - MLT1J LTR MaLR -312 199 144 256 375 0 0 chr10 129329229 129329341 -16259947 + MIR SINE MIR 151 262 0 298 357 9 9 chr10 129329759 129329871 -16259417 + MIR SINE MIR 86 197 -65 3782 128 15 5 chr10 129330494 129331101 -16258187 + L1MA5A LINE L1 5684 6296 -1 2217 108 0 0 chr10 129331228 129331525 -16257763 - AluSx SINE Alu -15 297 1 424 276 24 41 chr10 129331671 129331794 -16257494 - MIR SINE MIR -113 149 29 1146 298 86 10 chr10 129332223 129332737 -16256551 + L1MC4a LINE L1 5330 5882 -1926 669 280 106 86 chr10 129332757 129333200 -16256088 + LTR16B LTR ERVL 1 452 -12 190 152 30 0 chr10 129333223 129333256 -16256032 - MER5A DNA MER1_type 0 189 156 846 218 45 0 chr10 129333261 129333440 -16255848 - MER5A DNA MER1_type -1 188 2 881 264 18 0 chr10 129333578 129333798 -16255490 + MIR SINE MIR 2 225 -37 49 32 0 0 chr10 129334116 129334179 -16255109 + AT_rich Low_complexity Low_complexity 1 63 0 5464 102 29 11 chr10 129334181 129335026 -16254262 - L1PB2 LINE L1 -21 6130 5267 386 238 0 0 chr10 129335983 129336063 -16253225 - MIR SINE MIR -119 143 64 405 356 28 11 chr10 129336112 129336292 -16252996 + MIR SINE MIR 55 237 -25 278 234 9 93 chr10 129336451 129336558 -16252730 + MLT1J LTR MaLR 94 191 -320 367 299 0 63 chr10 129336778 129336854 -16252434 + LTR67 LTR ERVL 422 488 -69 4037 61 0 15 chr10 129336854 129337376 -16251912 + L1PA8 LINE L1 5659 6172 0 367 299 0 63 chr10 129337376 129337426 -16251862 + LTR67 LTR ERVL 488 540 -17 202 304 174 0 chr10 129338015 129338107 -16251181 + MIR SINE MIR 152 259 -3 1472 239 53 33 chr10 129338898 129339359 -16249929 + MLT1J LTR MaLR 1 508 -3 348 206 0 78 chr10 129339868 129339970 -16249318 + L1MC4 LINE L1 6612 6705 -1337 301 216 11 45 chr10 129339970 129340058 -16249230 + (CATATA)n Simple_repeat Simple_repeat 6 90 0 22 0 0 0 chr10 129340662 129340684 -16248604 + AT_rich Low_complexity Low_complexity 1 22 0 204 125 0 0 chr10 129343257 129343289 -16245999 + (A)n Simple_repeat Simple_repeat 1 32 0 216 326 84 0 chr10 129344176 129344271 -16245017 - MIR SINE MIR -67 195 93 282 235 0 0 chr10 129344449 129344530 -16244758 + (CA)n Simple_repeat Simple_repeat 1 81 0 802 235 50 55 chr10 129344532 129344770 -16244518 - MIR SINE MIR -17 245 9 356 292 29 15 chr10 129344787 129344924 -16244364 - L1ME4a LINE L1 -178 5943 5805 2084 103 39 3 chr10 129345456 129345766 -16243522 + L1PA10 LINE L1 5848 6168 0 2233 127 42 14 chr10 129345837 129346191 -16243097 - THE1B LTR MaLR 0 364 1 249 290 65 37 chr10 129346191 129346298 -16242990 - MIR SINE MIR -70 192 83 406 238 27 41 chr10 129346508 129346655 -16242633 - MER113 DNA MER1_type? -332 189 45 232 320 64 0 chr10 129346931 129347009 -16242279 + MIR SINE MIR 104 186 -76 185 281 101 22 chr10 129347174 129347263 -16242025 + MIR3 SINE MIR 62 157 -51 279 268 37 0 chr10 129347265 129347347 -16241941 + MER117 DNA MER1_type 32 116 -81 436 235 215 0 chr10 129347747 129347896 -16241392 - MER5A DNA MER1_type -2 187 7 305 331 27 18 chr10 129347929 129348097 -16241191 - MIR SINE MIR -56 152 25 27 49 0 0 chr10 129348301 129348342 -16240946 + AT_rich Low_complexity Low_complexity 1 41 0 437 265 73 15 chr10 129348515 129348651 -16240637 + MIR SINE MIR 100 243 -19 1707 217 57 73 chr10 129349528 129350086 -16239202 - MLT1H LTR MaLR 0 549 1 588 253 142 6 chr10 129350243 129350453 -16238835 + MIR SINE MIR 7 250 -12 607 181 138 88 chr10 129350945 129351036 -16238252 + MER3 DNA MER1_type 42 146 -63 1852 56 0 4 chr10 129351036 129351269 -16238019 - L1PA8 LINE L1 -1 6171 5940 607 181 138 88 chr10 129351269 129351337 -16237951 + MER3 DNA MER1_type 146 209 0 248 111 22 0 chr10 129353184 129353229 -16236059 + (CA)n Simple_repeat Simple_repeat 2 47 0 199 194 48 0 chr10 129353938 129354000 -16235288 + (CATA)n Simple_repeat Simple_repeat 3 67 0 29 70 0 0 chr10 129354776 129354833 -16234455 + AT_rich Low_complexity Low_complexity 1 57 0 456 266 101 19 chr10 129357042 129357249 -16232039 + MIR SINE MIR 31 254 -8 504 286 171 20 chr10 129357255 129357646 -16231642 + L2 LINE L2 2864 3313 0 604 240 178 18 chr10 129358603 129358828 -16230460 - MIR SINE MIR 0 262 2 560 271 70 19 chr10 129358963 129359177 -16230111 - MIR SINE MIR -22 240 16 233 292 125 65 chr10 129359292 129359460 -16229828 + MIR SINE MIR 34 211 -51 1993 134 16 19 chr10 129360078 129360391 -16228897 - AluSx SINE Alu 0 312 1 381 271 152 9 chr10 129361029 129361247 -16228041 + MIR SINE MIR 12 256 -6 369 227 34 0 chr10 129361382 129361470 -16227818 + MIR SINE MIR 59 149 -113 1001 268 56 11 chr10 129361585 129361854 -16227434 + MLT1J1 LTR MaLR 7 287 -159 284 317 7 35 chr10 129362856 129362998 -16226290 - MIR SINE MIR -1 261 124 727 247 11 11 chr10 129363425 129363599 -16225689 + MIR SINE MIR 45 218 -44 2519 92 23 0 chr10 129363680 129364027 -16225261 - THE1A LTR MaLR 0 355 1 235 312 69 21 chr10 129364199 129364388 -16224900 - L2 LINE L2 -557 2757 2560 2327 100 0 7 chr10 129365832 129366132 -16223156 - AluSq SINE Alu -15 298 1 313 262 5 0 chr10 129366135 129366252 -16223036 - MIR SINE MIR -67 141 31 289 333 33 50 chr10 129366331 129366511 -16222777 + MIR SINE MIR 59 235 -27 554 270 28 28 chr10 129366925 129367103 -16222185 - MIR3 SINE MIR -26 182 5 488 210 17 17 chr10 129367319 129367438 -16221850 - MIR SINE MIR -88 174 56 1202 246 64 56 chr10 129367728 129368231 -16221057 - MLT1J LTR MaLR 0 511 5 441 286 41 14 chr10 129368649 129368796 -16220492 - MIR SINE MIR -51 211 61 264 299 31 24 chr10 129370543 129370670 -16218618 + L2 LINE L2 3163 3290 -23 34 0 0 0 chr10 129370670 129370704 -16218584 + AT_rich Low_complexity Low_complexity 1 34 0 2207 105 0 10 chr10 129370704 129371000 -16218288 - AluSx SINE Alu -19 293 1 23 0 0 0 chr10 129371476 129371499 -16217789 + AT_rich Low_complexity Low_complexity 1 23 0 198 307 89 0 chr10 129372471 129372572 -16216716 + L2 LINE L2 2990 3099 -173 503 269 136 52 chr10 129372670 129372778 -16216510 - L2 LINE L2 -2 3311 3213 1085 177 56 23 chr10 129372778 129372993 -16216295 + MER58A DNA MER1_type 1 222 -2 503 269 136 52 chr10 129372993 129373075 -16216213 - L2 LINE L2 -100 3213 3139 2314 102 0 22 chr10 129373075 129373389 -16215899 + AluSg SINE Alu 1 307 -3 503 269 136 52 chr10 129373389 129373661 -16215627 - L2 LINE L2 -174 3139 2809 1722 268 24 20 chr10 129373724 129374225 -16215063 + MER20B DNA MER1_type 104 606 -177 381 176 59 65 chr10 129374393 129374563 -16214725 + MER20B DNA MER1_type 570 738 -45 209 254 74 0 chr10 129374828 129374898 -16214390 - MIR3 SINE MIR -53 155 91 462 18 0 0 chr10 129374931 129374986 -16214302 + (TG)n Simple_repeat Simple_repeat 1 55 0 209 316 40 36 chr10 129375509 129375723 -16213565 - MIR SINE MIR -3 259 44 432 208 10 0 chr10 129376217 129376318 -16212970 - L1MB3 LINE L1 0 6183 6082 484 322 128 26 chr10 129377450 129377878 -16211410 + L2 LINE L2 2842 3313 0 2452 86 0 10 chr10 129378082 129378396 -16210892 + AluSq SINE Alu 1 311 -2 181 243 0 0 chr10 129379370 129379407 -16209881 + L2 LINE L2 3191 3227 -45 528 293 18 36 chr10 129379620 129379692 -16209596 + MIR SINE MIR 35 107 -155 2491 87 0 3 chr10 129379692 129380001 -16209287 - AluSx SINE Alu -4 308 1 528 293 18 36 chr10 129380001 129380150 -16209138 + MIR SINE MIR 107 252 -10 1513 121 28 0 chr10 129380165 129380380 -16208908 - AluSg/x SINE Alu -1 311 91 240 247 0 106 chr10 129380455 129380540 -16208748 - L2 LINE L2 -3 3310 3235 1394 113 13 4 chr10 129380585 129380960 -16208328 - MSTA LTR MaLR 0 428 1 405 331 6 6 chr10 129382527 129382699 -16206589 + MIR SINE MIR 77 248 -14 353 228 9 97 chr10 129382690 129382804 -16206484 + L3 LINE CR1 1362 1465 -112 * 391 169 26 13 chr10 129382866 129382943 -16206345 - MER5A DNA MER1_type -80 109 32 768 174 214 6 chr10 129383044 129383316 -16205972 + Charlie5 DNA MER1_type 5 2624 0 634 301 27 0 chr10 129384012 129384195 -16205093 + MIR SINE MIR 50 237 -25 269 335 66 20 chr10 129385133 129385285 -16204003 + MIR SINE MIR 17 175 -87 288 293 72 86 chr10 129385346 129385708 -16203580 + L2 LINE L2 2944 3300 -13 35 24 0 0 chr10 129386380 129386422 -16202866 + AT_rich Low_complexity Low_complexity 1 42 0 342 291 60 39 chr10 129387822 129388004 -16201284 + MIR SINE MIR 12 197 -65 666 277 96 45 chr10 129388611 129389047 -16200241 - L1ME4a LINE L1 0 6121 5709 1884 139 15 0 chr10 129389047 129389321 -16199967 + AluSx SINE Alu 1 278 -34 183 80 0 0 chr10 129389323 129389348 -16199940 + (CAAT)n Simple_repeat Simple_repeat 4 28 0 666 277 96 45 chr10 129389348 129389468 -16199820 - L1ME4a LINE L1 -412 5709 5533 396 245 43 58 chr10 129389652 129389791 -16199497 - L1ME2 LINE L1 -7 6163 6026 287 169 56 0 chr10 129389860 129389949 -16199339 + (TA)n Simple_repeat Simple_repeat 2 95 0 1041 243 29 50 chr10 129389949 129390434 -16198854 + L1ME3A LINE L1 4311 4785 -1361 * 2110 231 89 22 chr10 129390408 129391172 -16198116 + L1ME3A LINE L1 5300 6158 -6 28 29 0 0 chr10 129391491 129391526 -16197762 + AT_rich Low_complexity Low_complexity 1 35 0 196 385 26 26 chr10 129391898 129392015 -16197273 - L2 LINE L2 -22 3250 3134 828 198 94 5 chr10 129394101 129394293 -16194995 + MER3 DNA MER1_type 1 209 0 2583 161 27 8 chr10 129396188 129396666 -16192622 - L1MB4 LINE L1 -1 6179 5693 395 253 32 89 chr10 129396729 129396887 -16192401 + MER5B DNA MER1_type 1 149 -29 181 172 35 126 chr10 129397784 129397871 -16191417 + MIR SINE MIR 76 154 -108 553 338 10 10 chr10 129397880 129398078 -16191210 + MLT1K LTR MaLR 1 198 -390 322 208 10 69 chr10 129398271 129398372 -16190916 + MLT1K LTR MaLR 478 572 -16 218 247 94 24 chr10 129398372 129398457 -16190831 + MIR SINE MIR 160 250 -12 293 219 82 0 chr10 129398920 129398993 -16190295 + MIR SINE MIR 75 153 -109 2374 82 7 0 chr10 129399092 129399386 -16189902 - AluY SINE Alu -15 296 1 539 311 84 35 chr10 129399523 129399893 -16189395 - L2 LINE L2 -5 3308 2921 870 295 51 15 chr10 129400075 129400407 -16188881 + MLT1I LTR MaLR 40 383 -26 223 322 34 87 chr10 129401028 129401292 -16187996 + L2 LINE L2 3018 3267 -5 219 69 0 0 chr10 129401333 129401362 -16187926 + (T)n Simple_repeat Simple_repeat 1 29 0 384 261 42 21 chr10 129401423 129401587 -16187701 - MIR SINE MIR -26 182 13 238 321 45 0 chr10 129402050 129402162 -16187126 + L2 LINE L2 3114 3230 -83 620 211 12 0 chr10 129402162 129402333 -16186955 + (TCCA)n Simple_repeat Simple_repeat 1 173 0 420 118 0 0 chr10 129402377 129402445 -16186843 + (TCCA)n Simple_repeat Simple_repeat 2 69 0 519 235 68 56 chr10 129402453 129402687 -16186601 - L2 LINE L2 0 3313 3077 2747 130 42 2 chr10 129403649 129404050 -16185238 - MER1A DNA MER1_type -112 417 1 639 260 87 0 chr10 129404094 129404267 -16185021 + MIR SINE MIR 47 234 -28 290 290 11 11 chr10 129404361 129404454 -16184834 + MIR3 SINE MIR 111 203 -5 211 233 0 0 chr10 129404564 129404607 -16184681 - MIR SINE MIR 0 262 220 1330 204 146 56 chr10 129404613 129404649 -16184639 - L1MD3 LINE L1 0 7995 7964 1863 165 3 10 chr10 129404649 129404952 -16184336 + AluJo SINE Alu 1 301 -11 1330 204 146 56 chr10 129404952 129405396 -16183892 - L1MD3 LINE L1 -31 7964 7472 1896 229 44 45 chr10 129405421 129405878 -16183410 - L1ME LINE L1 -372 5794 5338 2406 96 3 0 chr10 129405878 129406181 -16183107 - AluSg SINE Alu -6 304 1 1896 229 44 45 chr10 129406181 129406743 -16182545 - L1ME LINE L1 -828 5338 4783 188 35 35 0 chr10 129406990 129407019 -16182269 + (CA)n Simple_repeat Simple_repeat 2 31 0 495 293 125 24 chr10 129408741 129408996 -16180292 + L2 LINE L2 2899 3206 -107 279 0 0 0 chr10 129408996 129409027 -16180261 + (TG)n Simple_repeat Simple_repeat 2 32 0 495 293 125 24 chr10 129409027 129409147 -16180141 + L2 LINE L2 3206 3312 -1 228 290 0 29 chr10 129409629 129409698 -16179590 + GA-rich Low_complexity Low_complexity 3 69 0 186 314 100 0 chr10 129409801 129409871 -16179417 - MIR SINE MIR -77 131 55 315 136 15 45 chr10 129410211 129410277 -16179011 - MIR SINE MIR -89 173 110 453 307 57 5 chr10 129410941 129411133 -16178155 + MIR SINE MIR 48 249 -13 2329 75 7 0 chr10 129411688 129412009 -16177279 + AluSp SINE Alu 2 324 0 2277 139 86 2 chr10 129412162 129412557 -16176731 - MSTA LTR MaLR 0 428 1 394 311 137 9 chr10 129412613 129412832 -16176456 + MIR SINE MIR 16 262 0 536 259 76 15 chr10 129413754 129413951 -16175337 - MIR SINE MIR 0 262 54 1846 181 0 0 chr10 129414948 129415251 -16174037 + AluJb SINE Alu 1 303 -9 308 278 42 49 chr10 129415613 129415757 -16173531 - L2 LINE L2 -211 3061 2919 1057 241 79 29 chr10 129415871 129416267 -16173021 - MLT1J2 LTR MaLR 0 409 1 7792 27 20 8 chr10 129416286 129417281 -16172007 - L1PA3 LINE L1 -3 6152 5155 596 173 200 0 chr10 129417678 129417828 -16171460 + MER20 DNA MER1_type 37 216 -3 313 198 51 108 chr10 129418202 129418294 -16170994 + L1ME4a LINE L1 5959 6040 -81 2814 85 0 6 chr10 129418294 129418660 -16170628 - THE1B LTR MaLR 0 364 1 313 198 51 108 chr10 129418660 129418724 -16170564 + L1ME4a LINE L1 6040 6106 -15 391 262 109 45 chr10 129418726 129418947 -16170341 - L1MC4 LINE L1 0 8042 7808 955 196 5 0 chr10 129418955 129419144 -16170144 - L1MC4 LINE L1 -419 7623 7434 231 114 0 0 chr10 129419825 129419860 -16169428 + (CA)n Simple_repeat Simple_repeat 1 35 0 1741 189 0 84 chr10 129420956 129421373 -16167915 + MLT1B LTR MaLR 1 382 -8 356 242 22 11 chr10 129421400 129421491 -16167797 + MER45 DNA AcHobo 1 92 -86 353 255 98 0 chr10 129421576 129421678 -16167610 - L2 LINE L2 0 3272 3161 218 262 57 57 chr10 129423969 129424091 -16165197 + MIR SINE MIR 63 184 -78 2878 102 19 21 chr10 129425133 129425472 -16163816 - MER57B LTR ERV1 0 434 95 2170 121 0 9 chr10 129425472 129425787 -16163501 - AluSx SINE Alu 0 312 1 2878 102 19 21 chr10 129425787 129425877 -16163411 - MER57B LTR ERV1 -339 95 6 205 333 31 31 chr10 129425912 129426041 -16163247 + L2 LINE L2 2949 3077 -195 182 356 17 26 chr10 129427166 129427281 -16162007 + MIR SINE MIR 16 129 -79 264 122 0 0 chr10 129427427 129427468 -16161820 + (TC)n Simple_repeat Simple_repeat 1 41 0 227 152 0 0 chr10 129428039 129428085 -16161203 - LTR66 LTR ERVL -171 439 394 405 0 0 0 chr10 129428206 129428251 -16161037 + (CA)n Simple_repeat Simple_repeat 2 46 0 390 272 104 17 chr10 129429094 129429267 -16160021 + MIR SINE MIR 75 262 0 984 183 104 20 chr10 129429317 129429478 -16159810 + MER20 DNA MER1_type 1 184 -35 2141 130 0 10 chr10 129429478 129429786 -16159502 + AluSx SINE Alu 1 305 -7 984 183 104 20 chr10 129429786 129429826 -16159462 + MER20 DNA MER1_type 184 219 0 299 289 0 0 chr10 129429982 129430072 -16159216 + MIR3 SINE MIR 119 208 0 494 270 51 6 chr10 129434702 129434880 -16154408 + MIR SINE MIR 67 252 -10 262 319 91 44 chr10 129435556 129435854 -16153434 + L2 LINE L2 2842 3153 -119 522 260 27 7 chr10 129438245 129438395 -16150893 + MIR SINE MIR 63 215 -47 21 36 0 0 chr10 129439775 129439803 -16149485 + AT_rich Low_complexity Low_complexity 1 28 0 370 298 65 24 chr10 129439807 129439975 -16149313 - MIR3 SINE MIR -14 194 20 245 128 213 0 chr10 129440253 129440300 -16148988 + MLT1A1 LTR MaLR 1 57 -308 2148 102 0 3 chr10 129440303 129440586 -16148702 - AluSq SINE Alu -21 292 11 1461 214 0 7 chr10 129440596 129440871 -16148417 + MLT1A1 LTR MaLR 37 309 -56 1885 71 8 4 chr10 129441067 129441319 -16147969 - L1PA7 LINE L1 0 6154 5902 239 285 96 89 chr10 129442031 129442243 -16147045 + L1MC/D LINE L1 5619 5835 -1973 1982 132 50 4 chr10 129442243 129442524 -16146764 - AluSx SINE Alu -18 294 1 239 285 96 89 chr10 129442524 129442602 -16146686 + L1MC/D LINE L1 5835 5911 -1897 934 181 0 6 chr10 129442604 129442764 -16146524 + AluJb SINE Alu 134 292 -20 2452 65 7 10 chr10 129444528 129444836 -16144452 + AluSq SINE Alu 1 307 -6 990 155 0 26 chr10 129444845 129445000 -16144288 + AluSg/x SINE Alu 134 284 -26 22 0 0 0 chr10 129447566 129447588 -16141700 + AT_rich Low_complexity Low_complexity 1 22 0 388 349 41 7 chr10 129448005 129448247 -16141041 - MIR SINE MIR -12 250 3 238 311 29 48 chr10 129448294 129448397 -16140891 + L2 LINE L2 3172 3272 0 268 275 22 22 chr10 129448433 129448524 -16140764 + MIR SINE MIR 165 255 -7 380 164 63 19 chr10 129448754 129448913 -16140375 + (TA)n Simple_repeat Simple_repeat 1 166 0 506 267 80 38 chr10 129451067 129451329 -16137959 + L1ME4a LINE L1 5597 5869 -252 957 195 16 5 chr10 129453199 129453384 -16135904 + MER5A DNA MER1_type 1 187 -2 952 188 0 0 chr10 129453778 129453932 -16135356 + AluJb SINE Alu 140 293 -19 589 238 0 0 chr10 129454224 129454346 -16134942 - MER5B DNA MER1_type 0 178 57 294 29 0 0 chr10 129454350 129454385 -16134903 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 33156 30 18 1 chr10 129454391 129460391 -16128897 - L1PA2 LINE L1 -2 6153 24 352 250 0 28 chr10 129460458 129460566 -16128722 - MER5A DNA MER1_type -84 105 1 474 203 45 38 chr10 129461233 129461366 -16127922 + MIR SINE MIR 65 198 -64 417 191 12 33 chr10 129461464 129461580 -16127708 - MIR3 SINE MIR -21 187 74 303 324 63 0 chr10 129461749 129461891 -16127397 - MER117 DNA MER1_type 0 197 47 363 221 99 46 chr10 129462038 129462169 -16127119 - MLT1J2 LTR MaLR -309 141 4 730 101 0 0 chr10 129462571 129462691 -16126597 - AluSx SINE Alu 0 313 194 906 117 102 0 chr10 129462692 129462820 -16126468 - AluSx SINE Alu -171 141 1 263 279 67 29 chr10 129463821 129463925 -16125363 - MIR SINE MIR -102 160 53 227 225 0 0 chr10 129463940 129463980 -16125308 - MLT1L LTR MaLR -228 387 348 * 331 226 124 21 chr10 129463947 129464135 -16125153 - MLT1J1 LTR MaLR -212 299 4 241 211 0 0 chr10 129464785 129464823 -16124465 + MER1A DNA MER1_type 1 38 -489 * 2456 128 0 45 chr10 129464811 129464904 -16124384 + MER1A DNA MER1_type 165 261 -2441 1947 123 0 0 chr10 129464904 129465165 -16124123 - AluSx SINE Alu -22 290 30 2456 128 0 45 chr10 129465165 129465453 -16123835 + MER1A DNA MER1_type 261 529 0 218 240 57 14 chr10 129465854 129465924 -16123364 + MIR SINE MIR 78 151 -57 269 286 50 17 chr10 129465938 129466057 -16123231 - MIR SINE MIR 0 262 140 422 156 39 0 chr10 129466066 129466143 -16123145 - MLT1H LTR MaLR 0 549 470 880 144 8 0 chr10 129466149 129466281 -16123007 - AluSq/x SINE Alu -179 133 1 387 281 202 17 chr10 129467091 129467269 -16122019 - MIR SINE MIR 0 262 52 315 304 60 40 chr10 129467503 129467704 -16121584 - L1M4 LINE L1 -1147 4999 4795 253 172 31 0 chr10 129467759 129467823 -16121465 + (TA)n Simple_repeat Simple_repeat 1 66 0 390 288 48 53 chr10 129467867 129468224 -16121064 - L1M4 LINE L1 -1441 4705 4337 6790 54 0 0 chr10 129468796 129469575 -16119713 + L1PA7 LINE L1 5358 6136 -18 1112 83 11 17 chr10 129469577 129469616 -16119672 + (GAAA)n Simple_repeat Simple_repeat 1 218 0 1112 83 11 17 chr10 129469616 129469797 -16119491 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 305 228 22 76 chr10 129470266 129470358 -16118930 + L2 LINE L2 3227 3313 0 705 249 65 20 chr10 129470556 129470801 -16118487 + MIR SINE MIR 5 260 -2 288 254 129 6 chr10 129470879 129471055 -16118233 + L1ME3A LINE L1 5951 6161 -9 421 221 168 15 chr10 129473176 129473307 -16115981 + MER5B DNA MER1_type 1 151 -27 587 188 86 30 chr10 129473354 129473419 -16115869 - MER5A DNA MER1_type 0 189 129 1935 151 20 3 chr10 129473419 129473711 -16115577 + AluJb SINE Alu 1 297 -15 587 188 86 30 chr10 129473711 129473818 -16115470 - MER5A DNA MER1_type -60 129 6 191 278 33 44 chr10 129473917 129474007 -16115281 + MIR SINE MIR 63 151 -57 16157 124 33 8 chr10 129476343 129478701 -16110587 - Tigger1 DNA MER2_type 0 2418 1 668 168 28 28 chr10 129478834 129478977 -16110311 - MIR SINE MIR -12 250 108 438 214 0 87 chr10 129479009 129479135 -16110153 + MIR SINE MIR 39 153 -109 424 291 29 62 chr10 129479401 129479611 -16109677 + MLT1K LTR MaLR 373 575 -13 530 75 12 0 chr10 129479724 129479804 -16109484 + (TCCA)n Simple_repeat Simple_repeat 1 81 0 466 31 0 31 chr10 129480047 129480111 -16109177 + L1PA4 LINE L1 6093 6154 -1 231 249 21 93 chr10 129580916 129581013 -16008275 - MIR SINE MIR -56 152 101 849 276 29 4 chr10 129582432 129582671 -16006617 - MIR SINE MIR -6 256 12 2189 112 3 0 chr10 129584152 129584456 -16004832 - AluSp SINE Alu -8 305 1 632 239 18 6 chr10 129585087 129585250 -16004038 + MIR SINE MIR 21 185 -77 250 312 135 42 chr10 129585439 129585891 -16003397 + L2 LINE L2 2262 2755 -559 211 313 25 0 chr10 129585918 129585998 -16003290 - L2 LINE L2 0 3313 3232 266 325 56 40 chr10 129586569 129586695 -16002593 + L2 LINE L2 3127 3254 -18 333 68 0 0 chr10 129587417 129587461 -16001827 + (T)n Simple_repeat Simple_repeat 1 44 0 333 118 0 0 chr10 129587854 129587905 -16001383 + (GGAA)n Simple_repeat Simple_repeat 4 54 0 1710 162 35 3 chr10 129588448 129588732 -16000556 + AluJo SINE Alu 1 293 -19 451 236 172 19 chr10 129588820 129588977 -16000311 - MER5A DNA MER1_type 0 189 9 670 223 71 125 chr10 129589239 129589307 -15999981 + MER58A DNA MER1_type 1 71 -2349 1919 121 48 0 chr10 129589307 129589580 -15999708 + AluSx SINE Alu 1 286 -26 210 37 0 0 chr10 129589580 129589607 -15999681 + (CATA)n Simple_repeat Simple_repeat 2 28 0 1950 159 10 0 chr10 129589615 129589911 -15999377 + AluJo SINE Alu 1 299 -13 670 223 71 125 chr10 129589911 129590056 -15999232 + MER58A DNA MER1_type 77 212 -12 245 130 185 109 chr10 129590116 129590208 -15999080 + MIR SINE MIR 75 173 -89 634 244 68 68 chr10 129590861 129591111 -15998177 + Charlie8 DNA MER1_type 38 287 -2130 744 238 6 6 chr10 129591195 129591376 -15997912 + MIR SINE MIR 68 248 -14 268 292 100 23 chr10 129593747 129593877 -15995411 + L2 LINE L2 3169 3308 -5 267 343 74 37 chr10 129593926 129594223 -15995065 + L2 LINE L2 2923 3230 -42 377 258 23 23 chr10 129594425 129594553 -15994735 - MIR SINE MIR -115 147 20 1994 139 7 10 chr10 129595246 129595556 -15993732 + AluJo SINE Alu 1 309 -3 2312 84 0 26 chr10 129597254 129597563 -15991725 + AluSg SINE Alu 1 301 -9 372 321 71 31 chr10 129597586 129597782 -15991506 + MIR SINE MIR 47 250 -12 1964 143 10 13 chr10 129598166 129598473 -15990815 - AluJb SINE Alu -1 311 6 202 250 0 0 chr10 129599020 129599064 -15990224 + (TA)n Simple_repeat Simple_repeat 2 45 0 207 0 0 0 chr10 129600164 129600187 -15989101 + (TG)n Simple_repeat Simple_repeat 2 24 0 474 207 67 30 chr10 129601244 129601379 -15987909 + MER117 DNA MER1_type 7 146 -51 289 261 127 22 chr10 129601780 129601914 -15987374 + MER5A DNA MER1_type 7 154 -35 693 196 22 14 chr10 129601914 129602052 -15987236 - MER45A DNA AcHobo 0 178 40 1989 133 14 14 chr10 129602406 129602700 -15986588 + AluSx SINE Alu 1 294 -18 266 302 81 23 chr10 129603134 129603306 -15985982 - L2 LINE L2 -101 3212 3031 213 270 0 0 chr10 129603366 129603455 -15985833 + GA-rich Low_complexity Low_complexity 1 89 0 390 294 10 0 chr10 129603477 129603579 -15985709 - MLT1K LTR MaLR -292 296 194 2193 73 0 24 chr10 129604189 129604478 -15984810 + AluY SINE Alu 24 305 -6 294 219 14 27 chr10 129606426 129606499 -15982789 - MLT1K LTR MaLR 0 588 517 248 151 0 19 chr10 129606512 129606565 -15982723 + GA-rich Low_complexity Low_complexity 3 54 0 368 314 95 32 chr10 129606565 129606817 -15982471 - MLT1K LTR MaLR -66 522 255 2086 143 0 0 chr10 129607567 129607853 -15981435 + AluSx SINE Alu 1 286 -26 203 310 0 14 chr10 129607967 129608038 -15981250 - L2 LINE L2 -48 3224 3155 2674 128 7 57 chr10 129608263 129608718 -15980570 - Tigger2a DNA MER2_type -2 432 1 25 51 0 0 chr10 129608830 129608869 -15980419 + AT_rich Low_complexity Low_complexity 1 39 0 451 195 49 32 chr10 129609030 129609153 -15980135 - L2 LINE L2 0 3313 3189 1294 227 73 49 chr10 129609183 129609611 -15979677 - MLT1C LTR MaLR -1 466 25 2265 137 30 33 chr10 129609611 129609976 -15979312 - THE1B LTR MaLR 0 364 1 1294 227 73 49 chr10 129609976 129609997 -15979291 - MLT1C LTR MaLR -442 25 6 216 0 0 0 chr10 129610949 129610973 -15978315 + (T)n Simple_repeat Simple_repeat 1 24 0 405 171 0 14 chr10 129612063 129612133 -15977155 - L2 LINE L2 0 3313 3245 274 247 104 0 chr10 129612410 129612487 -15976801 + LTR67 LTR ERVL 42 126 -431 309 208 194 42 chr10 129613352 129613496 -15975792 - L2 LINE L2 -1831 1483 1318 246 32 0 0 chr10 129613544 129613575 -15975713 + (CA)n Simple_repeat Simple_repeat 2 32 0 398 202 87 46 chr10 129614434 129614607 -15974681 + L1ME4a LINE L1 5942 6121 0 21 0 0 0 chr10 129614609 129614630 -15974658 + AT_rich Low_complexity Low_complexity 1 21 0 961 263 96 37 chr10 129616096 129616473 -15972815 + MLT1I LTR MaLR 1 399 -10 519 261 0 9 chr10 129617182 129617293 -15971995 + MER5B DNA MER1_type 1 110 -68 1059 252 37 24 chr10 129617507 129617840 -15971448 - MLT1E3 LTR MaLR 0 613 294 1471 198 125 26 chr10 129617863 129618245 -15971043 - MER21B LTR ERV1 -2 603 418 645 203 78 152 chr10 129618327 129618583 -15970705 - MER21B LTR ERV1 -615 248 12 858 186 94 36 chr10 129618604 129618854 -15970434 - MLT1E1 LTR MaLR -294 360 57 458 171 0 57 chr10 129620448 129620536 -15968752 + L1ME LINE L1 5566 5648 -473 1075 168 5 35 chr10 129620538 129620735 -15968553 + AluJo SINE Alu 1 191 -121 996 223 16 11 chr10 129620735 129620923 -15968365 + AluJo SINE Alu 95 283 -29 2234 108 0 26 chr10 129621488 129621793 -15967495 + AluSg SINE Alu 2 298 -12 402 264 115 48 chr10 129622230 129622438 -15966850 + HAL1b LINE L1 70 291 -1057 5478 152 8 18 chr10 129622507 129623443 -15965845 + L1MA6 LINE L1 5373 6298 -2 489 42 83 0 chr10 129623444 129623516 -15965772 + Tigger3(Golem) DNA MER2_type 199 276 -2753 235 289 0 12 chr10 129623518 129623601 -15965687 + HAL1b LINE L1 339 420 -928 976 248 112 28 chr10 129623664 129624128 -15965160 + HAL1b LINE L1 526 1028 -320 1095 191 89 8 chr10 129624256 129624502 -15964786 + L1MD3 LINE L1 7730 7995 0 364 288 53 18 chr10 129624492 129624662 -15964626 + HAL1b LINE L1 1142 1317 -31 * 2480 128 22 6 chr10 129624690 129625048 -15964240 + THE1B LTR MaLR 1 364 0 304 297 143 11 chr10 129625167 129625342 -15963946 + L1ME4a LINE L1 5924 6121 0 237 220 68 0 chr10 129626225 129626284 -15963004 - MIR SINE MIR -93 169 107 1311 279 163 20 chr10 129626759 129627555 -15961733 + L2 LINE L2 1613 2522 -792 212 160 75 128 chr10 129627683 129627777 -15961511 + L2 LINE L2 3119 3207 -106 * 886 285 156 17 chr10 129627774 129628486 -15960802 + L2 LINE L2 2489 3313 0 249 296 0 0 chr10 129628489 129628543 -15960745 + L2 LINE L2 3186 3239 -33 881 244 53 13 chr10 129628589 129628814 -15960474 - MIR SINE MIR -16 246 13 889 307 26 20 chr10 129630897 129631239 -15958049 + LTR16C LTR ERVL 141 484 -7 672 186 0 0 chr10 129631284 129631461 -15957827 + (CA)n Simple_repeat Simple_repeat 1 177 0 230 173 39 77 chr10 129631674 129631726 -15957562 + L2 LINE L2 3236 3285 -28 186 43 0 0 chr10 129632903 129632926 -15956362 + (A)n Simple_repeat Simple_repeat 1 23 0 802 181 0 8 chr10 129633022 129633155 -15956133 + FLAM_C SINE Alu 1 132 -1 1525 257 83 29 chr10 129633274 129633753 -15955535 - MLT1D LTR MaLR 0 505 1 816 270 53 0 chr10 129633973 129634199 -15955089 + LTR16C LTR ERVL 254 491 0 320 290 91 28 chr10 129635564 129635740 -15953548 + MER5A DNA MER1_type 3 189 0 1464 210 33 30 chr10 129636053 129636415 -15952873 - MLT1C LTR MaLR 0 467 105 298 175 58 32 chr10 129636454 129636608 -15952680 + (TA)n Simple_repeat Simple_repeat 1 158 0 235 163 35 35 chr10 129636623 129636764 -15952524 + (TA)n Simple_repeat Simple_repeat 2 142 0 244 236 35 28 chr10 129636800 129636944 -15952344 + (TA)n Simple_repeat Simple_repeat 2 146 0 336 24 0 0 chr10 129636944 129636985 -15952303 + (TG)n Simple_repeat Simple_repeat 2 42 0 390 42 0 0 chr10 129637358 129637406 -15951882 + (CA)n Simple_repeat Simple_repeat 1 48 0 2112 207 67 0 chr10 129637408 129637829 -15951459 - MLT2B1 LTR ERVL -71 449 1 582 148 70 17 chr10 129637830 129637945 -15951343 - MLT1C LTR MaLR -346 121 1 271 243 27 14 chr10 129638159 129638233 -15951055 + MER5C DNA MER1_type 2 76 -248 2314 67 0 3 chr10 129638583 129638867 -15950421 + AluY SINE Alu 17 299 -12 237 253 190 34 chr10 129638873 129639142 -15950146 - L1MC5 LINE L1 -44 7917 7607 269 298 24 12 chr10 129639270 129639354 -15949934 - Charlie8 DNA MER1_type -2331 86 2 3323 163 48 7 chr10 129639536 129640113 -15949175 + MER7C DNA MER2_type 1 601 -1 3742 131 12 5 chr10 129640132 129640714 -15948574 + L1MA5 LINE L1 5713 6298 -2 1920 146 7 7 chr10 129640795 129641106 -15948182 + AluSx SINE Alu 1 311 0 344 354 75 0 chr10 129642262 129642409 -15946879 + MIR SINE MIR 23 180 -82 340 245 122 58 chr10 129643712 129643791 -15945497 - MIR SINE MIR -12 250 177 182 0 107 0 chr10 129643791 129643819 -15945469 + (TTATA)n Simple_repeat Simple_repeat 1 31 0 340 245 122 58 chr10 129643819 129643841 -15945447 - MIR SINE MIR -85 177 158 2227 100 0 14 chr10 129643841 129644132 -15945156 - AluSc SINE Alu -22 287 1 340 245 122 58 chr10 129644132 129644217 -15945071 - MIR SINE MIR -104 158 51 2114 121 84 35 chr10 129644497 129644844 -15944444 + THE1B LTR MaLR 1 364 0 1978 205 37 0 chr10 129644941 129645317 -15943971 - MLT1B LTR MaLR 0 390 1 2090 125 0 0 chr10 129645516 129645825 -15943463 + AluSx SINE Alu 5 313 0 643 184 0 4 chr10 129646183 129646392 -15942896 + AluJb SINE Alu 8 297 -15 613 290 148 30 chr10 129646490 129646856 -15942432 + MLT1J2 LTR MaLR 1 409 -41 840 185 6 103 chr10 129647229 129647701 -15941587 + MLT1A2 LTR MaLR 1 374 0 2430 174 69 19 chr10 129647802 129648278 -15941010 - MLT1D LTR MaLR -4 501 2 215 151 0 113 chr10 129649624 129649677 -15939611 - L2 LINE L2 -16 3297 3251 1801 167 6 22 chr10 129649836 129650153 -15939135 + AluJb SINE Alu 1 312 0 368 299 24 16 chr10 129650280 129650407 -15938881 + L2 LINE L2 2910 3037 -235 346 372 45 6 chr10 129650410 129650566 -15938722 + MIR3 SINE MIR 17 178 -30 1467 174 4 0 chr10 129651457 129651721 -15937567 - L1MA4 LINE L1 -5 6295 6031 390 200 42 11 chr10 129651727 129651822 -15937466 - MIR SINE MIR -104 158 61 183 80 0 0 chr10 129651835 129651860 -15937428 + (TCCC)n Simple_repeat Simple_repeat 1 25 0 1575 182 10 47 chr10 129651860 129652336 -15936952 - AluJb SINE Alu 0 466 2 1330 235 24 7 chr10 129654064 129654362 -15934926 - MLT1H1 LTR MaLR -4 551 249 764 133 18 0 chr10 129654359 129654472 -15934816 - MLT1H1 LTR MaLR -538 116 2 * 1992 204 28 32 chr10 129654827 129655322 -15933966 + MLT1D LTR MaLR 5 497 -8 1999 160 39 0 chr10 129655635 129655966 -15933322 + MER2 DNA MER2_type 1 344 0 281 269 0 26 chr10 129656040 129656118 -15933170 + L2 LINE L2 3150 3225 -47 1679 194 67 12 chr10 129656301 129656647 -15932641 + MLT1A1 LTR MaLR 1 365 0 265 210 32 0 chr10 129656717 129656779 -15932509 + MER2 DNA MER2_type 102 165 -180 364 296 0 0 chr10 129657054 129657135 -15932153 + L2 LINE L2 3191 3271 -1 303 281 93 88 chr10 129657328 129657524 -15931764 + MIR SINE MIR 30 218 -25 216 298 202 16 chr10 129657779 129657903 -15931385 + MIR3 SINE MIR 35 181 -27 24 53 0 0 chr10 129658424 129658462 -15930826 + AT_rich Low_complexity Low_complexity 1 38 0 2116 105 7 7 chr10 129658511 129658805 -15930483 - AluSx SINE Alu -18 294 1 215 77 0 26 chr10 129658833 129658872 -15930416 + (CAAAAA)n Simple_repeat Simple_repeat 2 39 0 1636 184 26 0 chr10 129658872 129659144 -15930144 - AluJo SINE Alu -31 281 3 412 597 0 6 chr10 129660735 129660916 -15928372 + polypyrimidine Low_complexity Low_complexity 1 180 0 343 227 8 17 chr10 129660921 129661040 -15928248 + CT-rich Low_complexity Low_complexity 3 120 0 206 325 154 31 chr10 129661744 129662092 -15927196 + L2 LINE L2 2640 3017 -255 378 350 45 6 chr10 129662625 129662782 -15926506 + MIR SINE MIR 97 259 -3 193 263 35 0 chr10 129662859 129662916 -15926372 - L2 LINE L2 -1 3312 3254 1604 223 3 0 chr10 129663767 129664076 -15925212 + AluJo SINE Alu 1 310 -2 365 256 54 54 chr10 129664179 129664308 -15924980 - L2 LINE L2 -14 3299 3171 545 263 75 55 chr10 129664319 129664612 -15924676 + L1M4 LINE L1 4830 5128 -1018 3448 194 54 58 chr10 129664726 129665172 -15924116 + L1MD2 LINE L1 5022 5468 -891 1690 198 3 3 chr10 129665172 129665481 -15923807 + AluJb SINE Alu 2 310 0 3448 194 54 58 chr10 129665481 129666371 -15922917 + L1MD2 LINE L1 5468 6346 -13 188 324 44 0 chr10 129667121 129667189 -15922099 + MIR3 SINE MIR 96 166 -42 315 0 0 0 chr10 129667781 129667816 -15921472 + (T)n Simple_repeat Simple_repeat 1 35 0 24 0 0 0 chr10 129668854 129668878 -15920410 + AT_rich Low_complexity Low_complexity 1 24 0 532 364 24 24 chr10 129669947 129670194 -15919094 - MIR SINE MIR -12 250 4 2051 90 4 0 chr10 129671461 129671728 -15917560 - AluSp SINE Alu -1 312 45 25 51 0 0 chr10 129672618 129672657 -15916631 + AT_rich Low_complexity Low_complexity 1 39 0 397 262 25 0 chr10 129672747 129672869 -15916419 + MER103 DNA DNA 31 155 -11 37 69 0 0 chr10 129674314 129674386 -15914902 + AT_rich Low_complexity Low_complexity 1 72 0 428 222 28 17 chr10 129674389 129674565 -15914723 + (TA)n Simple_repeat Simple_repeat 1 178 0 230 196 18 0 chr10 129674709 129674765 -15914523 - L1MC4 LINE L1 -1339 6703 6647 188 274 20 0 chr10 129675630 129675681 -15913607 - L2 LINE L2 -1 3312 3261 557 256 43 52 chr10 129675705 129675916 -15913372 + MIR SINE MIR 48 256 -6 589 260 110 18 chr10 129676258 129676593 -15912695 + L1ME3A LINE L1 5587 5952 -218 270 307 73 90 chr10 129678062 129678485 -15910803 - L2 LINE L2 0 3272 2857 1881 153 13 25 chr10 129678553 129678867 -15910421 + AluJb SINE Alu 1 310 -2 231 36 0 0 chr10 129679534 129679562 -15909726 + (CA)n Simple_repeat Simple_repeat 1 28 0 381 315 84 56 chr10 129679690 129679941 -15909347 - L1ME4a LINE L1 -195 5926 5669 200 35 35 0 chr10 129680011 129680040 -15909248 + (TTTTC)n Simple_repeat Simple_repeat 4 33 0 1689 157 62 36 chr10 129680485 129680841 -15908447 - MLT1A1 LTR MaLR 0 365 1 193 302 69 69 chr10 129681870 129682029 -15907259 + MIR SINE MIR 34 192 -70 238 327 35 88 chr10 129683214 129683327 -15905961 + L2 LINE L2 3147 3253 -19 1067 239 29 40 chr10 129683542 129683918 -15905370 - L1ME2 LINE L1 -10 6154 5783 * 2173 221 48 12 chr10 129683913 129684600 -15904688 + L1MC1 LINE L1 4288 4999 -1147 5290 169 23 25 chr10 129684715 129686042 -15903246 + L1MC1 LINE L1 5004 6325 -8 2409 88 0 0 chr10 129686043 129686349 -15902939 - AluY SINE Alu -5 306 1 383 246 8 0 chr10 129686769 129686887 -15902401 - Charlie2 DNA MER1_type -791 2071 1953 316 180 0 0 chr10 129686891 129686952 -15902336 + Charlie2 DNA MER1_type 2802 2862 0 1218 268 30 45 chr10 129687308 129687708 -15901580 + MLT1I LTR MaLR 13 406 -3 479 267 28 68 chr10 129688010 129688260 -15901028 - MLT1K LTR MaLR -21 567 328 2918 82 20 2 chr10 129688260 129688662 -15900626 + MLT2A2 LTR ERVL 1 409 -44 213 240 0 0 chr10 129688666 129688716 -15900572 + (TA)n Simple_repeat Simple_repeat 2 51 0 346 247 0 32 chr10 129688716 129688809 -15900479 + L1MC4 LINE L1 6614 6703 -1339 805 104 14 21 chr10 129688825 129688969 -15900319 + (CATATA)n Simple_repeat Simple_repeat 2 144 0 703 335 47 39 chr10 129689448 129689958 -15899330 + L2 LINE L2 2308 2821 -493 703 245 50 93 chr10 129690066 129690123 -15899165 + L2 LINE L2 3005 3063 -250 749 230 5 0 chr10 129690123 129690310 -15898978 - MER53 DNA DNA -1 188 1 703 245 50 93 chr10 129690310 129690575 -15898713 + L2 LINE L2 3063 3313 0 2411 94 11 25 chr10 129691675 129692035 -15897253 + THE1A LTR MaLR 1 355 0 867 251 49 37 chr10 129692418 129692908 -15896380 + L1MEc LINE L1 1841 2336 -4060 710 253 9 47 chr10 129692910 129693100 -15896188 - MIR SINE MIR -52 210 29 256 260 0 14 chr10 129693106 129693179 -15896109 + GA-rich Low_complexity Low_complexity 2 73 0 254 232 0 14 chr10 129693180 129693249 -15896039 + HAL1 LINE L1 2045 2112 -395 421 281 105 46 chr10 129693279 129693689 -15895599 + HAL1 LINE L1 2070 2503 -4 1796 219 112 15 chr10 129693803 129694277 -15895011 - MLT2B1 LTR ERVL 0 520 1 77 38 0 0 chr10 129694395 129694500 -15894788 + AT_rich Low_complexity Low_complexity 1 105 0 591 311 76 8 chr10 129694823 129695087 -15894201 + L2 LINE L2 2148 2429 -885 357 301 10 0 chr10 129695402 129695505 -15893783 - Charlie8 DNA MER1_type -2308 109 6 387 0 0 0 chr10 129695511 129695554 -15893734 + (TG)n Simple_repeat Simple_repeat 2 44 0 213 39 0 0 chr10 129695913 129695939 -15893349 + (TG)n Simple_repeat Simple_repeat 2 27 0 281 218 59 20 chr10 129695993 129696094 -15893194 - L1ME LINE L1 -460 5710 5606 272 315 37 0 chr10 129696117 129696225 -15893063 - L1ME LINE L1 -632 5546 5435 282 340 30 84 chr10 129699059 129699262 -15890026 - MIR3 SINE MIR -10 198 7 738 228 137 88 chr10 129700590 129700805 -15888483 - L1MC4 LINE L1 -2 8040 7837 844 138 0 8 chr10 129700805 129700961 -15888327 - FLAM_C SINE Alu 0 133 1 738 228 137 88 chr10 129700961 129701315 -15887973 - L1MC4 LINE L1 -205 7837 7443 644 265 182 3 chr10 129702223 129702547 -15886741 - L1MC4a LINE L1 -1919 5889 5508 368 299 107 62 chr10 129702632 129703101 -15886187 - L1MC4a LINE L1 -773 5373 4884 327 267 0 23 chr10 129703889 129703975 -15885313 + L2 LINE L2 3188 3271 -1 212 111 22 22 chr10 129703975 129704020 -15885268 + (TGGA)n Simple_repeat Simple_repeat 2 46 0 275 266 0 76 chr10 129704992 129705071 -15884217 - L2 LINE L2 -2 3270 3198 1757 137 31 0 chr10 129707728 129707984 -15881304 + AluSx SINE Alu 40 303 -9 864 210 27 11 chr10 129708584 129708770 -15880518 - MER5A DNA MER1_type 0 189 1 970 169 6 11 chr10 129709229 129709412 -15879876 - L1MB1 LINE L1 -5 6163 5982 1987 103 13 26 chr10 129709619 129709931 -15879357 + AluSq SINE Alu 1 308 -5 622 226 32 115 chr10 129709979 129710258 -15879030 + MER102a DNA MER1_type 75 330 0 833 155 0 43 chr10 129710782 129710943 -15878345 + FRAM SINE Alu 3 156 -10 308 124 0 124 chr10 129710869 129710958 -15878330 + AluJ/FRAM SINE Alu 225 302 0 208 277 45 27 chr10 129711336 129711448 -15877840 + T-rich Low_complexity Low_complexity 2 115 0 218 276 0 17 chr10 129713183 129713241 -15876047 + MIR SINE MIR 91 147 -115 215 0 67 0 chr10 129713664 129713694 -15875594 + (TAAAAA)n Simple_repeat Simple_repeat 2 33 0 653 136 51 0 chr10 129713873 129713991 -15875297 + AluSp SINE Alu 1 124 -189 218 364 9 0 chr10 129714164 129714274 -15875014 + CT-rich Low_complexity Low_complexity 2 112 0 1566 190 48 0 chr10 129716095 129716432 -15872856 - MLT2D LTR ERVL -61 353 1 208 273 0 15 chr10 129716434 129716500 -15872788 + (TA)n Simple_repeat Simple_repeat 2 66 0 408 264 45 34 chr10 129716687 129716865 -15872423 + MLT1D LTR MaLR 1 180 -325 507 17 0 0 chr10 129717652 129717712 -15871576 + (TG)n Simple_repeat Simple_repeat 2 61 0 219 333 78 11 chr10 129718162 129718252 -15871036 - MIR SINE MIR -70 138 43 189 0 0 0 chr10 129718424 129718445 -15870843 + (TTA)n Simple_repeat Simple_repeat 1 21 0 311 138 52 0 chr10 129718445 129718503 -15870785 - AluSg/x SINE Alu -34 266 206 7851 64 16 6 chr10 129718627 129719789 -15869499 + L1P LINE L1 3252 4424 -1722 278 243 14 29 chr10 129721355 129721425 -15867863 - L2 LINE L2 -1 3312 3244 1536 109 26 19 chr10 129721620 129721885 -15867403 - L1PA13 LINE L1 -4 6159 5893 289 243 57 0 chr10 129722223 129722293 -15866995 + MIR SINE MIR 56 129 -79 685 155 21 7 chr10 129722678 129722820 -15866468 - Tigger2 DNA MER2_type -295 2423 2280 375 174 14 0 chr10 129722817 129722886 -15866402 + MER8 DNA MER2_type 170 239 0 * 210 333 0 0 chr10 129723485 129723536 -15865752 + L2 LINE L2 3219 3269 -3 195 200 0 0 chr10 129723614 129723649 -15865639 - MIR SINE MIR -70 192 158 315 228 241 41 chr10 129723837 129723982 -15865306 - MIR3 SINE MIR -1 207 34 202 393 43 7 chr10 129724330 129724470 -15864818 + L2 LINE L2 2543 2687 -627 2117 112 0 3 chr10 129724944 129725249 -15864039 + AluSx SINE Alu 1 304 0 377 167 0 67 chr10 129725319 129725409 -15863879 + FLAM_A SINE Alu 51 123 -10 412 80 13 13 chr10 129725410 129725485 -15863803 + (TA)n Simple_repeat Simple_repeat 1 75 0 216 271 68 17 chr10 129726016 129726075 -15863213 - MER91A DNA MER1_type -8 188 127 329 302 31 31 chr10 129726103 129726199 -15863089 - MER91A DNA MER1_type -51 145 50 479 355 59 16 chr10 129727015 129727387 -15861901 - L2 LINE L2 -455 2859 2472 816 320 18 4 chr10 129728149 129728424 -15860864 - L2 LINE L2 -977 2337 2059 21 0 0 0 chr10 129728790 129728811 -15860477 + AT_rich Low_complexity Low_complexity 1 21 0 195 216 68 54 chr10 129729980 129730054 -15859234 - L3 LINE CR1 -2 1575 1501 3673 106 42 5 chr10 129730221 129730924 -15858364 - LTR12 LTR ERV1 -133 2295 1 259 321 63 19 chr10 129731799 129731929 -15857359 - MIR3 SINE MIR -6 202 73 2097 145 5 81 chr10 129732754 129733174 -15856114 + MLT1B LTR MaLR 1 388 -2 1565 164 13 53 chr10 129733255 129733559 -15855729 + AluJb SINE Alu 14 305 -7 959 104 7 15 chr10 129734741 129734876 -15854412 + AluSg/x SINE Alu 105 238 -74 314 179 0 28 chr10 129735139 129735245 -15854043 + T-rich Low_complexity Low_complexity 1 103 0 347 261 72 52 chr10 129735721 129735874 -15853414 + L2 LINE L2 3158 3313 0 2882 156 20 0 chr10 129736168 129736669 -15852619 - L1PB4 LINE L1 -7 6149 5639 586 204 101 44 chr10 129736691 129737054 -15852234 - L1ME1 LINE L1 -5 6161 5729 670 111 0 0 chr10 129737395 129737485 -15851803 - AluS SINE Alu -222 90 1 2027 138 3 0 chr10 129737488 129737793 -15851495 - AluSx SINE Alu -6 306 1 833 170 126 0 chr10 129737963 129738145 -15851143 + MSTA LTR MaLR 1 205 -223 2379 178 102 14 chr10 129738151 129738244 -15851044 - L1MC3 LINE L1 -635 7150 7067 198 71 0 0 chr10 129738244 129738272 -15851016 + (TTTA)n Simple_repeat Simple_repeat 4 31 0 2379 178 102 14 chr10 129738272 129738424 -15850864 - L1MC3 LINE L1 -718 7067 6930 207 0 0 0 chr10 129738424 129738447 -15850841 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2379 178 102 14 chr10 129738447 129738750 -15850538 - L1MC3 LINE L1 -855 6930 6553 236 310 78 0 chr10 129738905 129739021 -15850267 + L2 LINE L2 2305 2429 -885 357 301 10 0 chr10 129739336 129739439 -15849849 - Charlie8 DNA MER1_type -2308 109 6 333 0 0 0 chr10 129739445 129739482 -15849806 + (TG)n Simple_repeat Simple_repeat 2 38 0 183 80 0 0 chr10 129739842 129739867 -15849421 + (TG)n Simple_repeat Simple_repeat 1 25 0 288 326 22 11 chr10 129740225 129740381 -15848907 + CT-rich Low_complexity Low_complexity 1 157 0 244 307 11 23 chr10 129741362 129741450 -15847838 + MIR SINE MIR 158 244 -18 271 231 33 11 chr10 129745284 129745375 -15843913 + (TA)n Simple_repeat Simple_repeat 1 93 0 209 211 0 0 chr10 129745753 129745791 -15843497 + CT-rich Low_complexity Low_complexity 1 38 0 183 277 148 30 chr10 129747538 129747639 -15841649 - L2 LINE L2 -226 3046 2934 239 378 63 25 chr10 129747699 129747937 -15841351 - L2 LINE L2 -429 2885 2639 189 107 0 0 chr10 129748203 129748231 -15841057 + (CA)n Simple_repeat Simple_repeat 2 29 0 241 225 183 0 chr10 129748451 129748522 -15840766 + MIR3 SINE MIR 115 198 -10 21 0 0 0 chr10 129749479 129749500 -15839788 + AT_rich Low_complexity Low_complexity 1 21 0 861 252 53 22 chr10 129753523 129753749 -15835539 + MIR SINE MIR 1 233 -29 21 57 0 0 chr10 129753752 129753787 -15835501 + AT_rich Low_complexity Low_complexity 1 35 0 667 242 103 54 chr10 129753791 129754014 -15835274 - MIR SINE MIR -10 252 19 27 62 0 0 chr10 129755315 129755363 -15833925 + AT_rich Low_complexity Low_complexity 1 48 0 203 179 0 0 chr10 129755721 129755760 -15833528 + T-rich Low_complexity Low_complexity 1 39 0 2454 63 0 10 chr10 129756363 129756665 -15832623 + AluY SINE Alu 1 299 -12 811 226 86 1 chr10 129756820 129757048 -15832240 - MIR SINE MIR -13 249 4 433 176 136 116 chr10 129757236 129757486 -15831802 + LTR33 LTR ERVL 11 265 -256 452 217 116 0 chr10 129757502 129757631 -15831657 + LTR33 LTR ERVL 378 521 0 196 325 168 46 chr10 129758392 129759330 -15829958 + L2 LINE L2 1798 2850 -464 222 402 74 0 chr10 129759523 129759645 -15829643 + L2 LINE L2 3142 3272 0 2203 101 11 3 chr10 129760644 129760931 -15828357 + AluSx SINE Alu 14 302 -10 360 0 0 0 chr10 129761292 129761332 -15827956 + (TG)n Simple_repeat Simple_repeat 2 41 0 487 280 202 0 chr10 129763940 129764133 -15825155 - MIR SINE MIR -28 234 3 42 57 0 0 chr10 129765109 129765179 -15824109 + AT_rich Low_complexity Low_complexity 1 70 0 188 163 23 0 chr10 129769201 129769244 -15820044 + (TG)n Simple_repeat Simple_repeat 2 45 0 3027 142 36 35 chr10 129769447 129769995 -15819293 + MER44D DNA MER2_type 2 605 0 195 272 44 103 chr10 129770040 129770176 -15819112 + MER5A DNA MER1_type 49 176 -13 364 261 145 88 chr10 129770656 129770841 -15818447 - MLT1J2 LTR MaLR -14 436 228 829 193 137 0 chr10 129770841 129771038 -15818250 - MER58A DNA MER1_type 0 224 1 364 261 145 88 chr10 129771038 129771135 -15818153 - MLT1J2 LTR MaLR -222 228 138 23 78 0 0 chr10 129771270 129771321 -15817967 + AT_rich Low_complexity Low_complexity 1 51 0 505 276 113 57 chr10 129771727 129772133 -15817155 + MLT1J2 LTR MaLR 22 450 0 182 402 107 0 chr10 129772425 129772537 -15816751 - L2 LINE L2 -3 3269 3146 284 309 137 0 chr10 129774357 129774496 -15814792 - MIR SINE MIR 0 262 105 1330 201 81 19 chr10 129774608 129774931 -15814357 + MER2 DNA MER2_type 1 343 -1 192 188 0 0 chr10 129775054 129775118 -15814170 + (TA)n Simple_repeat Simple_repeat 1 64 0 26 64 0 0 chr10 129775650 129775697 -15813591 + AT_rich Low_complexity Low_complexity 1 47 0 338 245 66 19 chr10 129779129 129779235 -15810053 - MIR3 SINE MIR -11 197 87 25 31 0 0 chr10 129781817 129781849 -15807439 + AT_rich Low_complexity Low_complexity 1 32 0 332 261 145 111 chr10 129783554 129784014 -15805274 - L1M2 LINE L1 -5642 1207 446 452 264 46 17 chr10 129784226 129784400 -15804888 + MIR3 SINE MIR 7 185 -23 197 326 87 0 chr10 129786288 129786380 -15802908 - MIR SINE MIR -75 187 88 458 17 17 0 chr10 129786494 129786553 -15802735 + (TAGA)n Simple_repeat Simple_repeat 2 61 0 326 263 115 4 chr10 129786737 129786862 -15802426 + MIR SINE MIR 7 145 -63 303 280 79 7 chr10 129787480 129787635 -15801653 - L1ME LINE L1 -372 5790 5622 249 272 44 79 chr10 129787640 129787754 -15801534 + MIR SINE MIR 14 124 -84 202 114 29 0 chr10 129788296 129788331 -15800957 + T-rich Low_complexity Low_complexity 5 40 0 432 290 167 5 chr10 129789234 129789420 -15799868 + MIR SINE MIR 47 262 0 438 266 0 0 chr10 129789935 129790063 -15799225 + CT-rich Low_complexity Low_complexity 4 131 0 180 0 0 0 chr10 129790064 129790084 -15799204 + (TTCC)n Simple_repeat Simple_repeat 1 20 0 955 201 31 5 chr10 129790084 129790278 -15799010 - MLT1A1 LTR MaLR -58 307 109 243 423 8 0 chr10 129792684 129792814 -15796474 + L3 LINE CR1 879 1009 -568 1001 274 69 40 chr10 129792822 129793288 -15796000 + L2 LINE L2 1476 2000 -1314 28 48 0 0 chr10 129793456 129793498 -15795790 + AT_rich Low_complexity Low_complexity 1 42 0 22 35 0 0 chr10 129793794 129793823 -15795465 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr10 129795652 129795676 -15793612 + AT_rich Low_complexity Low_complexity 1 24 0 191 149 0 21 chr10 129795681 129795728 -15793560 + (CAA)n Simple_repeat Simple_repeat 2 47 0 1906 119 16 55 chr10 129796200 129796511 -15792777 + AluSx SINE Alu 1 299 -13 1296 216 114 66 chr10 129796955 129797395 -15791893 - MER110 LTR ERV1 -30 461 1 191 255 39 20 chr10 129797900 129797951 -15791337 + L2 LINE L2 3238 3289 -24 399 41 0 0 chr10 129798160 129798209 -15791079 + (TG)n Simple_repeat Simple_repeat 2 50 0 21 57 0 0 chr10 129801016 129801051 -15788237 + AT_rich Low_complexity Low_complexity 1 35 0 755 301 83 30 chr10 129801203 129801979 -15787309 - L1ME4a LINE L1 -105 6016 5198 28 0 0 0 chr10 129802114 129802142 -15787146 + AT_rich Low_complexity Low_complexity 1 28 0 1883 155 7 3 chr10 129802276 129802573 -15786715 - AluJo SINE Alu -14 298 1 2456 241 74 2 chr10 129802674 129803227 -15786061 + MLT1E LTR MaLR 1 593 0 2038 32 4 0 chr10 129803661 129803908 -15785380 - L1PA5 LINE L1 -1285 4861 4614 7439 31 2 0 chr10 129803908 129805180 -15784108 + L1PA5 LINE L1 4870 6143 -11 323 213 125 0 chr10 129805180 129805260 -15784028 + L1MC4 LINE L1 6614 6703 -1339 305 320 46 51 chr10 129805216 129805391 -15783897 - L1MC4 LINE L1 -1339 6703 6530 * 184 303 45 15 chr10 129805986 129806052 -15783236 + L2 LINE L2 3245 3312 -1 274 232 18 0 chr10 129806580 129806636 -15782652 - L1MD2 LINE L1 -254 6105 6049 389 341 126 40 chr10 129806923 129807518 -15781770 - L2 LINE L2 -5 3267 2622 1499 201 52 36 chr10 129809744 129810128 -15779160 - MLT1B LTR MaLR 0 390 1 22 0 0 0 chr10 129810442 129810464 -15778824 + AT_rich Low_complexity Low_complexity 1 22 0 1615 191 19 22 chr10 129810844 129811205 -15778083 - L1MB8 LINE L1 -4 6174 5815 5506 158 60 16 chr10 129811205 129811830 -15777458 - L1MCa LINE L1 -4937 1489 796 216 0 0 0 chr10 129811830 129811854 -15777434 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5506 158 60 16 chr10 129811854 129812289 -15776999 - L1MCa LINE L1 -5630 796 382 1898 184 18 6 chr10 129812346 129812689 -15776599 - L1MB8 LINE L1 -366 5818 5472 2633 146 36 28 chr10 129812702 129812748 -15776540 - L1MB2 LINE L1 -6 6165 6121 2008 145 3 0 chr10 129812748 129813044 -15776244 - AluSx SINE Alu -15 297 1 2633 146 36 28 chr10 129813044 129813498 -15775790 - L1MB2 LINE L1 -50 6121 5661 997 181 0 0 chr10 129813501 129813672 -15775616 - FRAM SINE Alu -10 166 1 1484 127 59 4 chr10 129813674 129813927 -15775361 - L1MB2 LINE L1 -524 5659 5393 234 365 96 0 chr10 129814272 129814376 -15774912 - MER81 DNA DNA 0 114 1 2536 36 0 55 chr10 129815837 129816166 -15773122 + AluY SINE Alu 1 311 0 229 149 90 0 chr10 129818143 129818210 -15771078 + MER103 DNA DNA 8 80 -86 862 260 29 41 chr10 129818211 129818453 -15770835 + MIR SINE MIR 2 240 -22 396 0 0 0 chr10 129818545 129818589 -15770699 + (TCCA)n Simple_repeat Simple_repeat 1 44 0 225 0 0 0 chr10 129818622 129818647 -15770641 + (GA)n Simple_repeat Simple_repeat 1 25 0 610 211 19 39 chr10 129818897 129819053 -15770235 - L2 LINE L2 -1 3312 3160 2315 97 10 0 chr10 129819879 129820188 -15769100 - AluSp SINE Alu -1 312 1 343 287 0 11 chr10 129820279 129820373 -15768915 - MIR3 SINE MIR -7 201 109 2144 162 70 8 chr10 129820793 129821194 -15768094 - MSTA LTR MaLR 0 428 3 9092 164 11 43 chr10 129821196 129822902 -15766386 - MSTA-int LTR MaLR 0 1651 1 2188 162 61 10 chr10 129822902 129823115 -15766173 - MSTA LTR MaLR 0 428 227 432 0 0 0 chr10 129823115 129823163 -15766125 + (TG)n Simple_repeat Simple_repeat 2 49 0 2188 162 61 10 chr10 129823163 129823356 -15765932 - MSTA LTR MaLR -201 227 1 1080 144 6 0 chr10 129823988 129824148 -15765140 + AluSg/x SINE Alu 134 294 -16 2288 116 0 0 chr10 129824150 129824461 -15764827 + AluSx SINE Alu 1 311 -1 220 173 55 8 chr10 129824503 129824630 -15764658 + (TA)n Simple_repeat Simple_repeat 1 133 0 326 100 17 0 chr10 129825117 129825177 -15764111 + (CA)n Simple_repeat Simple_repeat 2 62 0 200 333 12 25 chr10 129827176 129827257 -15762031 - L2 LINE L2 0 3313 3234 911 286 152 22 chr10 129827285 129828136 -15761152 - L2 LINE L2 0 3313 2343 1297 207 146 47 chr10 129828136 129828580 -15760708 - MLT1D LTR MaLR 0 505 18 575 307 90 33 chr10 129828646 129828978 -15760310 - L2 LINE L2 -1257 2057 1707 249 268 42 0 chr10 129828960 129829031 -15760257 - L2 LINE L2 -213 3059 2986 * 245 397 74 5 chr10 129829087 129829276 -15760012 - L2 LINE L2 -556 2758 2557 1668 173 50 11 chr10 129829566 129829843 -15759445 + AluJb SINE Alu 1 288 -24 774 334 69 11 chr10 129829886 129830410 -15758878 - L2 LINE L2 -1050 2264 1711 452 199 228 7 chr10 129830778 129830914 -15758374 + L2 LINE L2 1846 2011 -1303 660 167 61 15 chr10 129831253 129831385 -15757903 + L2 LINE L2 3176 3313 0 21 0 0 0 chr10 129831910 129831931 -15757357 + AT_rich Low_complexity Low_complexity 1 21 0 415 375 20 0 chr10 129833365 129833517 -15755771 - MIR3 SINE MIR -14 194 40 323 23 0 0 chr10 129834232 129834276 -15755012 + L1PA3 LINE L1 6111 6154 -1 228 278 47 34 chr10 129835008 129835117 -15754171 - MER5B DNA MER1_type -68 121 2 243 259 0 0 chr10 129836004 129836062 -15753226 + (CAA)n Simple_repeat Simple_repeat 2 59 0 813 220 65 0 chr10 129836077 129836263 -15753025 - MIR SINE MIR -13 249 52 211 311 78 0 chr10 129836399 129836489 -15752799 - MIR SINE MIR -54 208 112 1589 51 46 9 chr10 129837118 129837334 -15751954 - L1PA7 LINE L1 -3 6151 5928 243 341 32 63 chr10 129839526 129839652 -15749636 - MIR SINE MIR -66 142 21 1179 273 46 15 chr10 129840194 129840589 -15748699 + LTR16C LTR ERVL 83 489 -2 305 331 48 54 chr10 129840947 129841113 -15748175 - MIR3 SINE MIR -19 189 25 25 0 0 68 chr10 129841476 129841520 -15747768 + AT_rich Low_complexity Low_complexity 1 41 0 373 298 161 6 chr10 129842080 129842241 -15747047 - MIR3 SINE MIR -9 199 14 724 238 78 19 chr10 129843149 129843355 -15745933 - MIR SINE MIR -34 228 11 285 55 455 0 chr10 129847255 129847310 -15741978 + MADE1 DNA Mariner 1 80 0 259 254 42 0 chr10 129847443 129847514 -15741774 - L2 LINE L2 -4 3268 3195 204 294 165 0 chr10 129847973 129848058 -15741230 + MIR SINE MIR 58 156 -106 2176 80 11 21 chr10 129848062 129848370 -15740918 + AluY SINE Alu 1 305 0 2290 99 14 0 chr10 129849945 129850239 -15739049 + AluSx SINE Alu 1 298 -14 235 284 82 67 chr10 129852087 129852221 -15737067 + MIR SINE MIR 63 198 -64 189 175 0 0 chr10 129853534 129853574 -15735714 + (TG)n Simple_repeat Simple_repeat 2 41 0 268 211 0 35 chr10 129854323 129854380 -15734908 + L2 LINE L2 3217 3271 -1 620 304 35 2 chr10 129854833 129855033 -15734255 - MIR3 SINE MIR -4 204 1 180 286 18 0 chr10 129855446 129855502 -15733786 + L2 LINE L2 3257 3313 0 259 307 183 36 chr10 129855619 129855756 -15733532 + L2 LINE L2 3116 3272 0 1208 138 32 32 chr10 129855789 129856006 -15733282 - MER20 DNA MER1_type 0 219 3 195 69 0 0 chr10 129856935 129856964 -15732324 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 627 248 101 28 chr10 129858560 129858778 -15730510 - MIR SINE MIR -9 253 20 186 269 96 0 chr10 129859146 129859198 -15730090 + L2 LINE L2 3248 3304 -9 181 347 31 51 chr10 129859570 129859668 -15729620 - MIR SINE MIR -147 115 20 303 283 91 0 chr10 129859966 129860065 -15729223 + MIR SINE MIR 30 137 -71 1473 194 113 80 chr10 129860158 129860647 -15728641 + MLT1D LTR MaLR 1 505 0 210 71 0 0 chr10 129861278 129861306 -15727982 + (TTCA)n Simple_repeat Simple_repeat 4 31 0 4402 168 39 22 chr10 129861436 129861554 -15727734 - L1PB4 LINE L1 0 6156 6042 1858 118 207 11 chr10 129861554 129861911 -15727377 + MSTA LTR MaLR 1 427 -1 4402 168 39 22 chr10 129861911 129863637 -15725651 - L1PB4 LINE L1 -114 6042 4280 238 289 19 29 chr10 129863705 129863809 -15725479 - L2 LINE L2 -182 3090 2988 207 275 225 12 chr10 129863806 129863886 -15725402 - L3 LINE CR1 -150 1427 1331 * 584 305 120 44 chr10 129864237 129864738 -15724550 + L2 LINE L2 2430 2968 -346 511 296 75 92 chr10 129864720 129864836 -15724452 + L2 LINE L2 2863 2979 -293 * 312 70 0 0 chr10 129864836 129864879 -15724409 + (CA)n Simple_repeat Simple_repeat 1 43 0 511 296 75 92 chr10 129864879 129865174 -15724114 + L2 LINE L2 2979 3267 -5 434 306 143 14 chr10 129865784 129865993 -15723295 + MIR SINE MIR 19 254 -8 23 0 0 0 chr10 129866293 129866316 -15722972 + AT_rich Low_complexity Low_complexity 1 23 0 572 278 72 31 chr10 129867297 129867520 -15721768 + MIR SINE MIR 20 251 -11 518 231 206 42 chr10 129868298 129868545 -15720743 + HAL1b LINE L1 318 523 -825 2502 51 0 0 chr10 129868545 129868838 -15720450 + AluY SINE Alu 1 293 -18 518 231 206 42 chr10 129868838 129868950 -15720338 + HAL1b LINE L1 523 736 -612 1001 161 28 0 chr10 129869879 129870059 -15719229 + MER5A DNA MER1_type 5 189 0 409 293 79 57 chr10 129870382 129870699 -15718589 + L1ME LINE L1 2588 2911 -3235 363 304 65 0 chr10 129870702 129870886 -15718402 + L1ME LINE L1 3757 3952 -2194 270 56 0 0 chr10 129871206 129871242 -15718046 + (TA)n Simple_repeat Simple_repeat 1 36 0 568 288 58 18 chr10 129871256 129871638 -15717650 + L1ME LINE L1 4437 4833 -1313 484 299 64 43 chr10 129871864 129872233 -15717055 + L1ME LINE L1 5045 5435 -762 593 287 112 32 chr10 129872531 129872639 -15716649 - L1ME3A LINE L1 -230 5923 5825 2411 138 28 0 chr10 129872639 129872993 -15716295 - THE1B LTR MaLR 0 364 1 593 287 112 32 chr10 129872993 129873989 -15715299 - L1ME3A LINE L1 -328 5825 4724 659 271 62 52 chr10 129874160 129874791 -15714497 - L1ME3A LINE L1 -1587 4542 3104 269 309 44 22 chr10 129874828 129875103 -15714185 - L1ME3A LINE L1 -3105 3024 2744 2129 112 0 3 chr10 129875197 129875522 -15713766 - AluSg1 SINE Alu 0 324 1 417 97 0 0 chr10 129875549 129875621 -15713667 + (TC)n Simple_repeat Simple_repeat 1 72 0 373 371 78 36 chr10 129875699 129875819 -15713469 - L1ME3A LINE L1 -5310 809 695 1951 117 40 0 chr10 129875819 129876113 -15713175 - AluSx SINE Alu 0 305 1 373 371 78 36 chr10 129876113 129876352 -15712936 - L1ME3A LINE L1 -5424 695 434 335 270 97 65 chr10 129876712 129876897 -15712391 + L1ME LINE L1 5462 5652 -469 212 195 39 13 chr10 129876897 129876974 -15712314 + (TTAA)n Simple_repeat Simple_repeat 2 80 0 845 195 107 111 chr10 129877232 129877699 -15711589 - LTR37B LTR ERV1 0 468 4 376 376 72 58 chr10 129877725 129878241 -15711047 + L2 LINE L2 2408 2930 -384 2346 122 0 0 chr10 129879738 129880080 -15709208 + AluSx SINE Alu 1 342 0 193 296 80 0 chr10 129880477 129880565 -15708723 - MIR SINE MIR -96 112 18 226 308 28 55 chr10 129880833 129881015 -15708273 + L1MEd LINE L1 102 278 -5841 27 0 0 0 chr10 129881587 129881614 -15707674 + AT_rich Low_complexity Low_complexity 1 27 0 337 172 54 32 chr10 129882663 129882756 -15706532 - MIR SINE MIR -40 222 128 220 229 0 33 chr10 129882937 129882998 -15706290 + (CACTC)n Simple_repeat Simple_repeat 1 59 0 290 232 63 32 chr10 129883597 129883692 -15705596 - MIR SINE MIR -100 162 65 197 356 81 23 chr10 129884121 129884295 -15704993 - L3 LINE CR1 -20 1557 1374 196 113 48 129 chr10 129884336 129884398 -15704890 - MIR SINE MIR -67 141 85 340 268 0 0 chr10 129884635 129884717 -15704571 + L2 LINE L2 3155 3236 -36 936 251 65 18 chr10 129886326 129886709 -15702579 - L1ME4a LINE L1 -188 5933 5533 235 260 60 0 chr10 129886773 129886873 -15702415 - L1ME4a LINE L1 -669 5452 5347 316 229 76 108 chr10 129886884 129887041 -15702247 + MIR SINE MIR 101 252 -10 317 350 175 9 chr10 129887149 129887366 -15701922 - MIR SINE MIR -1 261 9 260 253 82 68 chr10 129887395 129887541 -15701747 + MIR3 SINE MIR 33 180 -28 1259 157 42 0 chr10 129887707 129887924 -15701364 - MER46A DNA MER2_type 0 236 11 216 67 0 0 chr10 129887925 129887955 -15701333 + (TG)n Simple_repeat Simple_repeat 2 31 0 333 164 45 0 chr10 129887969 129888036 -15701252 - MIR SINE MIR -87 175 106 328 94 19 0 chr10 129888181 129888234 -15701054 + MER65B LTR ERV1 1 54 -477 395 354 24 24 chr10 129888914 129889120 -15700168 - L1ME4a LINE L1 -227 5894 5689 2304 106 3 0 chr10 129889391 129889702 -15699586 - AluSq SINE Alu 0 313 2 547 207 9 60 chr10 129889957 129890073 -15699215 + MER81 DNA DNA 2 111 -3 258 359 151 16 chr10 129890078 129890270 -15699018 + L3 LINE CR1 1282 1499 -78 269 277 0 0 chr10 129890270 129890335 -15698953 + MER5B DNA MER1_type 1 65 -113 10532 187 22 7 chr10 129890340 129893659 -15695629 + L1PA16 LINE L1 2791 6148 -18 21 36 0 0 chr10 129893659 129893687 -15695601 + AT_rich Low_complexity Low_complexity 1 28 0 445 295 16 8 chr10 129893688 129893817 -15695471 + MER5B DNA MER1_type 49 178 0 250 311 95 0 chr10 129893873 129893947 -15695341 - MER5A DNA MER1_type -83 106 26 180 306 16 16 chr10 129894022 129894084 -15695204 + L3 LINE CR1 1513 1574 -3 294 324 86 9 chr10 129894638 129894743 -15694545 + MIR SINE MIR 2 114 -148 266 341 93 0 chr10 129895544 129895673 -15693615 - MIR SINE MIR -70 192 52 287 343 136 0 chr10 129896137 129896277 -15693011 - L2 LINE L2 -16 3256 3098 257 246 15 0 chr10 129896369 129896434 -15692854 + LTR67 LTR ERVL 2 67 -490 1506 187 42 7 chr10 129896604 129896724 -15692564 + AluJo SINE Alu 1 115 -197 219 69 0 0 chr10 129896724 129896753 -15692535 + (TAA)n Simple_repeat Simple_repeat 2 30 0 1506 187 42 7 chr10 129896753 129896916 -15692372 + AluJo SINE Alu 115 294 -18 576 324 40 57 chr10 129896919 129897268 -15692020 + LTR67 LTR ERVL 199 541 -16 225 339 110 24 chr10 129897557 129897684 -15691604 - L2 LINE L2 -6 3266 3129 23 0 0 0 chr10 129897747 129897770 -15691518 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr10 129899174 129899199 -15690089 + AT_rich Low_complexity Low_complexity 1 25 0 2166 144 0 0 chr10 129899471 129899783 -15689505 + AluSx SINE Alu 1 312 0 854 177 40 17 chr10 129899825 129900000 -15689288 + MER1B DNA MER1_type 107 285 -54 434 33 16 0 chr10 129899985 129900046 -15689242 + MER41B LTR ERV1 484 545 -90 * 1984 132 3 10 chr10 129900629 129900917 -15688371 + AluSx SINE Alu 1 286 -26 198 0 0 0 chr10 129900923 129900945 -15688343 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 628 303 75 0 chr10 129901349 129901577 -15687711 - MIR SINE MIR -16 246 2 2042 131 12 29 chr10 129902408 129902751 -15686537 + MER1B DNA MER1_type 1 337 0 1888 123 43 65 chr10 129903023 129903374 -15685914 - MER2 DNA MER2_type 0 344 2 289 98 0 0 chr10 129903524 129903565 -15685723 - MER8 DNA MER2_type -5 234 194 1865 239 127 65 chr10 129904763 129906277 -15683011 + L1MC4a LINE L1 4966 5333 -813 2041 143 27 0 chr10 129906403 129906704 -15682584 + AluSc SINE Alu 1 309 0 305 292 107 36 chr10 129906839 129907007 -15682281 + MIR SINE MIR 13 192 -70 396 250 118 21 chr10 129907099 129907243 -15682045 + L1ME LINE L1 5530 5687 -434 2026 122 24 3 chr10 129907318 129907613 -15681675 + AluSc SINE Alu 1 301 -8 26 0 0 0 chr10 129907672 129907698 -15681590 + AT_rich Low_complexity Low_complexity 1 26 0 915 218 111 83 chr10 129907857 129908289 -15680999 - L1MC4 LINE L1 -887 7155 6712 225 295 158 0 chr10 129908864 129908959 -15680329 + MIR SINE MIR 31 140 -122 991 229 44 61 chr10 129909000 129909029 -15680259 + LTR37A LTR ERV1 19 47 -379 653 220 115 35 chr10 129909029 129909229 -15680059 + MER20 DNA MER1_type 1 216 -3 991 229 44 61 chr10 129909229 129909610 -15679678 + LTR37A LTR ERV1 47 422 -4 241 350 10 0 chr10 129912248 129912348 -15676940 - L3b LINE CR1 -338 1245 1145 749 198 82 87 chr10 129912798 129913005 -15676283 + MER63A DNA MER1_type 1 206 -4 3068 238 48 8 chr10 129913105 129914103 -15675185 + L1ME2 LINE L1 3014 4051 -2095 280 179 0 0 chr10 129914103 129914159 -15675129 - MLT2C1 LTR ERVL 0 520 465 1951 153 13 28 chr10 129914211 129914586 -15674702 - MLT2C1 LTR ERVL -38 482 1 4005 198 79 47 chr10 129914586 129915912 -15673376 + L1ME2 LINE L1 4064 5463 -701 4251 123 8 0 chr10 129915912 129916547 -15672741 + L1PA16 LINE L1 5524 6163 -3 4005 198 79 47 chr10 129916547 129917012 -15672276 + L1ME2 LINE L1 5463 5912 -252 1732 190 5 46 chr10 129917013 129917276 -15672012 - MLT1A1 LTR MaLR -2 363 118 1693 68 4 68 chr10 129917276 129917539 -15671749 - L1PA6 LINE L1 -1 6153 5908 1732 190 5 46 chr10 129917539 129917643 -15671645 - MLT1A1 LTR MaLR -247 118 11 237 149 43 0 chr10 129917656 129917703 -15671585 + L1ME2 LINE L1 5906 5954 -210 536 179 76 35 chr10 129917723 129917868 -15671420 + L1MA10 LINE L1 6180 6330 -4 366 296 9 9 chr10 129918181 129918296 -15670992 - LTR67 LTR ERVL -367 190 76 675 67 0 0 chr10 129918460 129918549 -15670739 + (GAATG)n Simple_repeat Simple_repeat 4 92 0 180 333 27 13 chr10 129918852 129918927 -15670361 + MIR SINE MIR 21 96 -166 1017 93 0 0 chr10 129919443 129919594 -15669694 + (TGGA)n Simple_repeat Simple_repeat 3 153 0 778 266 164 62 chr10 129921047 129921618 -15667670 - L2 LINE L2 -4 3309 2701 21 0 0 0 chr10 129921936 129921957 -15667331 + AT_rich Low_complexity Low_complexity 1 21 0 5355 150 29 19 chr10 129922018 129922990 -15666298 - L1MC1 LINE L1 -6 6327 5347 2290 108 33 28 chr10 129923015 129923376 -15665912 + THE1B LTR MaLR 1 363 -1 337 248 116 8 chr10 129923619 129923740 -15665548 - MIR SINE MIR -5 257 124 414 296 53 90 chr10 129923762 129923848 -15665440 - MLT1K LTR MaLR -24 564 476 2181 123 0 0 chr10 129923848 129924141 -15665147 + AluSx SINE Alu 1 293 -19 414 296 53 90 chr10 129924141 129924409 -15664879 - MLT1K LTR MaLR -112 476 223 1249 186 9 0 chr10 129924585 129924806 -15664482 + MER58A DNA MER1_type 1 223 -1 470 331 92 23 chr10 129924963 129925353 -15663935 - L2 LINE L2 -348 2966 2550 221 316 104 74 chr10 129926826 129927123 -15662165 - L2 LINE L2 -4 3268 2963 202 282 9 55 chr10 129927614 129927724 -15661564 - L2 LINE L2 -353 2960 2856 244 294 34 67 chr10 129927978 129928097 -15661191 - MER91B DNA MER1_type -74 116 2 270 136 0 0 chr10 129928098 129928142 -15661146 + (CA)n Simple_repeat Simple_repeat 2 45 0 234 313 73 62 chr10 129930726 129930822 -15658466 - MIR3 SINE MIR -52 156 60 486 304 49 66 chr10 129931110 129931659 -15657629 - L1ME4a LINE L1 -104 6017 5478 814 165 0 63 chr10 129931680 129931838 -15657450 + FAM SINE Alu 21 168 -17 2122 134 0 7 chr10 129931960 129932265 -15657023 - AluSx SINE Alu -7 305 3 25 0 0 0 chr10 129932267 129932292 -15656996 + AT_rich Low_complexity Low_complexity 1 25 0 2755 215 107 39 chr10 129932489 129934145 -15655143 - L1ME1 LINE L1 -93 6142 4379 545 207 0 13 chr10 129934187 129934786 -15654502 + (TA)n Simple_repeat Simple_repeat 1 590 0 310 292 45 0 chr10 129934786 129934875 -15654413 + L1MC4 LINE L1 6613 6705 -1337 566 245 0 15 chr10 129934881 129935433 -15653855 + (TA)n Simple_repeat Simple_repeat 1 543 0 7333 227 44 23 chr10 129935435 129938098 -15651190 - L1ME1 LINE L1 -1806 4409 1752 3810 261 78 29 chr10 129938105 129939651 -15649637 - L1ME1 LINE L1 -4738 1658 38 263 250 0 25 chr10 129939654 129939734 -15649554 + LTR67 LTR ERVL 468 545 -12 661 283 52 90 chr10 129939899 129940245 -15649043 + L2 LINE L2 2940 3272 0 365 301 122 6 chr10 129940526 129940682 -15648606 - MIR3 SINE MIR -20 188 15 303 287 0 0 chr10 129940969 129941056 -15648232 + (TATATG)n Simple_repeat Simple_repeat 5 91 0 232 275 37 18 chr10 129941870 129941979 -15647309 - 7SK RNA RNA -74 119 9 312 143 0 0 chr10 129943446 129943502 -15645786 + (TA)n Simple_repeat Simple_repeat 1 56 0 320 309 10 119 chr10 129944420 129944555 -15644733 + MIR3 SINE MIR 33 142 -66 948 226 58 0 chr10 129944555 129944763 -15644525 + MER58A DNA MER1_type 2 221 -3 320 309 10 119 chr10 129944763 129944821 -15644467 + MIR3 SINE MIR 142 205 -3 390 202 18 9 chr10 129946511 129946625 -15642663 + GA-rich Low_complexity Low_complexity 4 118 0 181 304 104 0 chr10 129947024 129947139 -15642149 - MIR SINE MIR -17 245 119 26 50 0 0 chr10 129947377 129947417 -15641871 + AT_rich Low_complexity Low_complexity 1 40 0 1356 219 1 57 chr10 129947517 129947896 -15641392 + L1MC4 LINE L1 6241 6359 0 2251 93 0 3 chr10 129948288 129948579 -15640709 + AluSq SINE Alu 7 296 -17 25 0 0 0 chr10 129948856 129948881 -15640407 + AT_rich Low_complexity Low_complexity 1 25 0 259 309 111 37 chr10 129948954 129949116 -15640172 + MIR3 SINE MIR 20 193 -15 293 175 165 21 chr10 129949501 129949598 -15639690 + MER113 DNA MER1_type? 9 119 -402 446 327 40 31 chr10 129949702 129949874 -15639414 - MIR3 SINE MIR -43 165 17 23 33 0 0 chr10 129950077 129950107 -15639181 + AT_rich Low_complexity Low_complexity 1 30 0 2289 119 0 0 chr10 129952338 129952650 -15636638 + AluSx SINE Alu 1 312 0 518 225 195 24 chr10 129954411 129954580 -15634708 - MIR SINE MIR -50 212 15 1721 198 49 0 chr10 129954686 129955034 -15634254 - MLT1A1 LTR MaLR 0 365 1 2083 128 7 0 chr10 129955044 129955376 -15633912 - AluSx SINE Alu 0 312 3 1304 211 122 8 chr10 129955487 129955847 -15633441 + MLT1C LTR MaLR 59 459 -8 2513 55 0 7 chr10 129956507 129956814 -15632474 + AluY SINE Alu 1 305 -6 243 318 23 0 chr10 129957005 129957093 -15632195 + MIR3 SINE MIR 108 197 -11 221 0 35 0 chr10 129957151 129957180 -15632108 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 230 250 19 0 chr10 129958033 129958085 -15631203 + L2 LINE L2 3140 3192 -80 228 293 13 27 chr10 129958317 129958392 -15630896 - L2 LINE L2 -80 3192 3119 4188 218 62 31 chr10 129959634 129962773 -15626515 + L1MD1 LINE L1 1 3040 -3596 1854 129 0 15 chr10 129962773 129963037 -15626251 + AluSx SINE Alu 35 294 -18 4188 218 62 31 chr10 129963037 129964953 -15624335 + L1MD1 LINE L1 3040 5537 -1099 1663 188 0 37 chr10 129964953 129965251 -15624037 + AluJb SINE Alu 1 287 -25 4188 218 62 31 chr10 129965251 129966387 -15622901 + L1MD1 LINE L1 5537 6636 0 2203 92 0 14 chr10 129966815 129967099 -15622189 + AluSc SINE Alu 1 282 -27 255 93 0 0 chr10 129967099 129967142 -15622146 + (CATA)n Simple_repeat Simple_repeat 2 44 0 231 367 13 0 chr10 129967225 129967304 -15621984 + MLT1G1 LTR MaLR 81 160 -435 7393 160 33 29 chr10 129967315 129968659 -15620629 + Ricksha DNA DNA 1896 3244 -2 208 303 126 8 chr10 129968722 129968841 -15620447 - L2 LINE L2 0 3313 3181 288 313 93 62 chr10 129969013 129969101 -15620187 - L2 LINE L2 -1441 1873 1789 2013 78 0 30 chr10 129969101 129969371 -15619917 - AluSq SINE Alu -13 300 39 288 313 93 62 chr10 129969371 129969800 -15619488 - L2 LINE L2 -1525 1789 1340 424 189 90 16 chr10 129969815 129969937 -15619351 - LTR50 LTR ERVL -28 767 637 479 313 26 21 chr10 129969945 129970137 -15619151 - L1ME LINE L1 -320 5801 5609 2578 105 22 19 chr10 129970388 129970751 -15618537 - THE1B LTR MaLR 0 364 1 29 0 0 0 chr10 129971149 129971178 -15618110 + AT_rich Low_complexity Low_complexity 1 29 0 216 0 0 0 chr10 129972038 129972062 -15617226 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 360 0 0 0 chr10 129972610 129972650 -15616638 + (TC)n Simple_repeat Simple_repeat 1 40 0 437 302 12 17 chr10 129973095 129973267 -15616021 + MER5A DNA MER1_type 19 189 0 592 56 37 9 chr10 129974989 129975096 -15614192 + (TG)n Simple_repeat Simple_repeat 1 110 0 324 0 0 0 chr10 129975994 129976030 -15613258 + (GA)n Simple_repeat Simple_repeat 1 36 0 2388 81 3 0 chr10 129976773 129977069 -15612219 + AluSp SINE Alu 1 297 -16 241 103 0 51 chr10 129977102 129977141 -15612147 - Tigger7 DNA MER2_type -6 2481 2445 387 145 0 43 chr10 129977266 129977335 -15611953 + HY3 scRNA scRNA 2 67 -34 * 2780 188 22 2 chr10 129977302 129977791 -15611497 - Tigger7 DNA MER2_type -234 499 1 186 135 0 81 chr10 129977918 129977955 -15611333 + L2 LINE L2 3271 3304 -9 385 218 39 0 chr10 129980890 129980968 -15608320 - L2 LINE L2 -1 3271 3191 532 270 0 0 chr10 129980994 129981105 -15608183 + MER81 DNA DNA 4 114 0 784 148 44 93 chr10 129981288 129981471 -15607817 - MER69A DNA AcHobo -2 175 2 412 190 156 11 chr10 129981501 129981611 -15607677 - MIR SINE MIR -65 143 74 2471 66 3 0 chr10 129981613 129981914 -15607374 - AluY SINE Alu -9 302 1 212 31 62 0 chr10 129982281 129982313 -15606975 + T-rich Low_complexity Low_complexity 2 35 0 733 241 115 0 chr10 129982443 129982634 -15606654 + MIR SINE MIR 20 232 -30 375 67 0 40 chr10 129984111 129984186 -15605102 + (TTCA)n Simple_repeat Simple_repeat 2 73 0 363 144 144 67 chr10 129984298 129984347 -15604941 - MLT1C LTR MaLR -205 262 218 2513 147 15 13 chr10 129984347 129984736 -15604552 + MLT1B LTR MaLR 1 390 0 363 144 144 67 chr10 129984736 129984776 -15604512 - MLT1C LTR MaLR -249 218 166 2224 116 3 0 chr10 129984786 129985089 -15604199 + AluSx SINE Alu 1 304 -8 396 329 96 59 chr10 129985132 129985695 -15603593 + L1MEd LINE L1 135 718 -5487 736 209 11 0 chr10 129985967 129986144 -15603144 + GA-rich Low_complexity Low_complexity 2 180 0 387 74 19 0 chr10 129986144 129986198 -15603090 + (GGAA)n Simple_repeat Simple_repeat 1 55 0 700 156 86 8 chr10 129986199 129986327 -15602961 - MLT1C LTR MaLR -324 143 6 444 274 26 8 chr10 129986837 129986954 -15602334 - MER5B DNA MER1_type -59 119 1 23 0 0 0 chr10 129990507 129990530 -15598758 + AT_rich Low_complexity Low_complexity 1 23 0 24 53 0 0 chr10 129990699 129990737 -15598551 + AT_rich Low_complexity Low_complexity 1 38 0 180 111 0 0 chr10 129990945 129990972 -15598316 + (TGAG)n Simple_repeat Simple_repeat 1 27 0 269 192 0 68 chr10 129996664 129996737 -15592551 + (TATG)n Simple_repeat Simple_repeat 2 69 0 31 58 0 0 chr10 129996957 129997009 -15592279 + AT_rich Low_complexity Low_complexity 1 52 0 23 0 0 0 chr10 129997070 129997093 -15592195 + AT_rich Low_complexity Low_complexity 1 23 0 444 327 77 14 chr10 129997194 129997491 -15591797 + L1MEd LINE L1 35 350 -6046 2417 80 0 3 chr10 129997603 129997904 -15591384 + AluY SINE Alu 1 300 -11 1447 112 0 42 chr10 129997983 129998198 -15591090 + AluSg/x SINE Alu 101 306 -6 1176 165 70 12 chr10 129998539 129998781 -15590507 - MER101B LTR ERV1 -314 256 1 3037 172 49 38 chr10 129999365 129999727 -15589561 + L1MA4 LINE L1 5636 6010 -290 1848 113 0 4 chr10 129999727 129999975 -15589313 + AluSg SINE Alu 1 247 -63 3037 172 49 38 chr10 129999975 130000270 -15589018 + L1MA4 LINE L1 6010 6300 0 319 341 47 65 chr10 130001207 130001377 -15587911 - MIR SINE MIR -87 175 9 354 45 0 0 chr10 130001964 130002008 -15587280 + (GA)n Simple_repeat Simple_repeat 1 44 0 302 326 23 23 chr10 130002112 130002284 -15587004 + L1MEd LINE L1 454 625 -5072 398 328 110 15 chr10 130002344 130002670 -15586618 + L1MEd LINE L1 868 1224 -4981 1158 135 46 14 chr10 130002776 130002993 -15586295 + MLT2A2 LTR ERVL 293 453 0 419 325 13 19 chr10 130002995 130003149 -15586139 + MIR SINE MIR 93 245 -17 405 281 11 134 chr10 130004136 130004503 -15584785 + L2 LINE L2 2866 3260 -12 552 196 3 90 chr10 130004872 130005029 -15584259 + MER34B LTR ERV1 1 160 -382 244 359 52 24 chr10 130005157 130005369 -15583919 - L2 LINE L2 -244 3028 2811 2231 113 10 0 chr10 130006226 130006528 -15582760 - AluSx SINE Alu -7 305 1 299 221 198 12 chr10 130007043 130007129 -15582159 - L2 LINE L2 0 3313 3212 989 181 6 0 chr10 130007129 130007289 -15581999 + AluJb SINE Alu 133 293 -19 187 237 0 0 chr10 130007296 130007334 -15581954 - L2 LINE L2 -97 3216 3179 901 216 143 27 chr10 130007487 130007558 -15581730 - AluJo SINE Alu -19 293 232 2156 204 139 66 chr10 130007558 130008328 -15580960 + LTR1B LTR ERV1 1 826 0 901 216 143 27 chr10 130008328 130008515 -15580773 - AluJo SINE Alu -80 232 5 1400 112 65 0 chr10 130008519 130008733 -15580555 - HSMAR2 DNA Mariner -1069 233 6 321 26 0 0 chr10 130008735 130008773 -15580515 + (TG)n Simple_repeat Simple_repeat 2 39 0 1237 201 0 20 chr10 130009230 130009474 -15579814 - AluJo SINE Alu -4 308 70 478 276 138 78 chr10 130010137 130010433 -15578855 + L1ME4a LINE L1 5293 5570 -551 1712 105 0 0 chr10 130010433 130010662 -15578626 - AluSg/x SINE Alu 0 312 84 478 276 138 78 chr10 130010662 130010817 -15578471 + L1ME4a LINE L1 5570 5714 -407 4017 148 25 28 chr10 130010817 130011172 -15578116 + L1MA7 LINE L1 5568 5922 -369 2286 182 78 0 chr10 130011172 130011567 -15577721 - MSTB LTR MaLR 0 426 1 4017 148 25 28 chr10 130011567 130011831 -15577457 + L1MA7 LINE L1 5922 6187 -104 2048 123 0 37 chr10 130011831 130012155 -15577133 - AluSq SINE Alu -1 312 1 4017 148 25 28 chr10 130012155 130012251 -15577037 + L1MA7 LINE L1 6187 6282 -9 478 276 138 78 chr10 130012251 130012464 -15576824 + L1ME4a LINE L1 5714 5998 -123 281 284 0 23 chr10 130012737 130012825 -15576463 + (CATATA)n Simple_repeat Simple_repeat 6 91 0 657 256 0 37 chr10 130013194 130013358 -15575930 + FRAM SINE Alu 1 158 -8 235 269 19 0 chr10 130013358 130013410 -15575878 + G-rich Low_complexity Low_complexity 4 56 0 210 214 36 18 chr10 130013709 130013765 -15575523 + MIR SINE MIR 96 152 -56 25 0 0 0 chr10 130014470 130014495 -15574793 + AT_rich Low_complexity Low_complexity 1 25 0 768 149 15 30 chr10 130015363 130015497 -15573791 - MER4D LTR ERV1 -7 896 765 3391 119 32 60 chr10 130015497 130016060 -15573228 + LTR10B LTR ERV1 1 547 0 726 221 0 8 chr10 130016065 130016196 -15573092 - AluSq/x SINE Alu -181 131 2 377 165 8 75 chr10 130016725 130016852 -15572436 - MER41A LTR ERV1 -9 516 393 1685 107 0 9 chr10 130016853 130016983 -15572305 + AluSq SINE Alu 1 130 -183 209 33 33 0 chr10 130016983 130017013 -15572275 + (TA)n Simple_repeat Simple_repeat 2 32 0 1685 107 0 9 chr10 130017013 130017106 -15572182 + AluSq SINE Alu 130 222 -91 4031 52 12 0 chr10 130017106 130017590 -15571698 + LTR2B LTR ERV1 1 490 0 250 125 0 0 chr10 130017590 130017622 -15571666 + AluSc SINE Alu 217 248 -51 1019 173 0 65 chr10 130017622 130017836 -15571452 + AluSq SINE Alu 85 284 -29 304 234 40 40 chr10 130019108 130019232 -15570056 - Charlie7 DNA MER1_type -1 2611 2488 244 178 37 112 chr10 130019219 130019326 -15569962 - Charlie7 DNA MER1_type -2464 148 50 * 306 164 0 0 chr10 130020121 130020176 -15569112 + (TCCA)n Simple_repeat Simple_repeat 1 55 0 533 133 11 11 chr10 130023538 130023664 -15565624 - SVA Other Other 0 1386 1291 298 326 8 23 chr10 130024570 130024699 -15564589 + MIR SINE MIR 86 212 -50 279 214 48 48 chr10 130025206 130025290 -15563998 + MIR SINE MIR 69 152 -56 2063 139 0 13 chr10 130025805 130026106 -15563182 + AluSx SINE Alu 1 297 -15 203 266 53 43 chr10 130026130 130026224 -15563064 + MIR SINE MIR 103 197 -65 1749 174 8 37 chr10 130026405 130026756 -15562532 - L1MB5 LINE L1 0 6174 5834 749 268 92 4 chr10 130026820 130027048 -15562240 - MIR SINE MIR 0 262 15 2170 128 55 3 chr10 130027820 130028163 -15561125 - MER46B DNA MER2_type 0 236 1 201 314 68 42 chr10 130028173 130028291 -15560997 + MIR SINE MIR 21 141 -67 447 243 30 77 chr10 130029166 130029335 -15559953 + MIR SINE MIR 32 192 -70 315 0 0 0 chr10 130029541 130029576 -15559712 + (TG)n Simple_repeat Simple_repeat 2 36 0 1365 113 183 4 chr10 130030377 130030607 -15558681 - AluJo SINE Alu -14 298 28 210 105 0 0 chr10 130032520 130032558 -15556730 + (A)n Simple_repeat Simple_repeat 1 38 0 842 77 47 0 chr10 130032616 130032786 -15556502 + (TAGA)n Simple_repeat Simple_repeat 1 178 0 706 202 11 0 chr10 130032792 130032970 -15556318 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 * 780 149 24 0 chr10 130032927 130033095 -15556193 + (TAGA)n Simple_repeat Simple_repeat 2 173 0 345 287 143 30 chr10 130033141 130033378 -15555910 - L2 LINE L2 -130 3183 2920 282 315 79 0 chr10 130034368 130034495 -15554793 + MIR3 SINE MIR 20 156 -52 843 263 33 7 chr10 130034632 130034906 -15554382 - MER113 DNA MER1_type? -240 281 1 578 200 100 7 chr10 130034957 130035107 -15554181 + MIR SINE MIR 16 179 -83 345 47 0 0 chr10 130035773 130035816 -15553472 + (TG)n Simple_repeat Simple_repeat 1 43 0 789 292 44 0 chr10 130036234 130036484 -15552804 + MIR SINE MIR 2 262 0 2461 132 67 5 chr10 130036533 130036934 -15552354 - MSTA LTR MaLR -2 426 1 2246 212 9 7 chr10 130036936 130037366 -15551922 + MLT1F LTR MaLR 3 433 -109 207 0 0 0 chr10 130039057 130039080 -15550208 + (TC)n Simple_repeat Simple_repeat 2 24 0 205 269 19 0 chr10 130039088 130039140 -15550148 + CT-rich Low_complexity Low_complexity 5 57 0 594 274 161 67 chr10 130039311 130039803 -15549485 - MLT1H LTR MaLR -1 548 11 1124 205 9 27 chr10 130040519 130040743 -15548545 - MER58A DNA MER1_type -4 220 1 185 179 26 0 chr10 130040744 130040783 -15548505 - MIR3 SINE MIR -49 159 120 310 245 11 17 chr10 130041086 130041202 -15548086 - MIR SINE MIR -73 135 22 864 212 42 5 chr10 130041500 130041689 -15547599 + MER6B DNA MER2_type 1 196 -14 227 31 31 0 chr10 130041790 130041822 -15547466 + (CA)n Simple_repeat Simple_repeat 1 33 0 242 297 39 55 chr10 130042394 130042500 -15546788 + MIR SINE MIR 103 208 -54 2238 111 7 0 chr10 130042500 130042797 -15546491 + AluSx SINE Alu 1 299 -13 242 297 39 55 chr10 130042797 130042818 -15546470 + MIR SINE MIR 208 228 -34 213 191 64 0 chr10 130042819 130042866 -15546422 + L2 LINE L2 3252 3301 -12 189 94 0 0 chr10 130042977 130043009 -15546279 + (A)n Simple_repeat Simple_repeat 1 32 0 623 283 10 69 chr10 130043464 130043754 -15545534 - L2 LINE L2 -13 3259 2987 197 234 16 31 chr10 130043796 130043860 -15545428 - L2 LINE L2 -1006 2308 2246 1973 143 49 35 chr10 130043876 130044246 -15545042 - THE1C LTR MaLR 0 375 1 2073 124 3 3 chr10 130046453 130046743 -15542545 + AluSc SINE Alu 1 290 -19 2127 222 12 20 chr10 130047480 130047975 -15541313 + L1ME1 LINE L1 5670 6160 -6 264 346 168 0 chr10 130047998 130048212 -15541076 + HAL1 LINE L1 1 250 -2257 1204 301 119 14 chr10 130048327 130048965 -15540323 + HAL1 LINE L1 454 1158 -1349 1026 243 52 55 chr10 130048973 130049376 -15539912 + HAL1 LINE L1 1238 1639 -868 327 73 0 0 chr10 130049376 130049417 -15539871 - 5S rRNA rRNA -79 42 2 596 278 54 19 chr10 130049422 130049627 -15539661 + HAL1 LINE L1 1631 1842 -665 407 278 23 46 chr10 130049733 130049906 -15539382 - MER5A DNA MER1_type -3 186 18 3627 171 35 58 chr10 130050001 130050709 -15538579 - L1MB7 LINE L1 -19 6165 5475 231 36 0 0 chr10 130050709 130050737 -15538551 + (TTA)n Simple_repeat Simple_repeat 1 28 0 3627 171 35 58 chr10 130050737 130050806 -15538482 - L1MB7 LINE L1 -709 5475 5406 399 333 52 49 chr10 130051020 130051365 -15537923 - HAL1b LINE L1 -706 642 297 183 80 0 0 chr10 130051994 130052019 -15537269 + (TC)n Simple_repeat Simple_repeat 2 26 0 275 233 165 19 chr10 130052695 130052798 -15536490 + Charlie8 DNA MER1_type 55 172 -2245 824 222 148 32 chr10 130053086 130053397 -15535891 + L1ME3 LINE L1 5814 6160 -2 308 274 78 113 chr10 130055247 130055655 -15533633 + L2 LINE L2 2920 3313 0 422 331 81 0 chr10 130056050 130056222 -15533066 + MIR SINE MIR 51 236 -26 1727 156 59 7 chr10 130058066 130058355 -15530933 - AluJb SINE Alu -8 304 1 247 303 0 0 chr10 130059066 130059142 -15530146 - L2 LINE L2 -4 3268 3193 345 277 174 20 chr10 130059555 130059750 -15529538 - MIR SINE MIR -17 245 21 1612 201 109 14 chr10 130059926 130060348 -15528940 - LTR40b LTR ERVL 0 462 1 838 224 55 5 chr10 130060356 130060557 -15528731 - MIR SINE MIR -24 238 28 221 246 288 8 chr10 130060652 130060770 -15528518 - MER5A DNA MER1_type 0 189 39 353 289 82 30 chr10 130060784 130060919 -15528369 + L2 LINE L2 3170 3311 -2 208 273 233 7 chr10 130061564 130061715 -15527573 - MER5A DNA MER1_type 0 178 1 208 324 49 20 chr10 130061744 130061846 -15527442 + MIR SINE MIR 46 150 -112 2433 93 0 0 chr10 130062206 130062507 -15526781 + AluSc SINE Alu 1 301 -8 425 222 60 8 chr10 130062584 130062701 -15526587 + LTR16A1 LTR ERVL 333 455 -2 256 315 55 0 chr10 130062740 130062867 -15526421 + L2 LINE L2 1879 2012 -1302 994 253 119 30 chr10 130063566 130063969 -15525319 + MLT1J1 LTR MaLR 1 439 -7 206 325 104 0 chr10 130064394 130064471 -15524817 + L2 LINE L2 3177 3261 -11 1917 146 0 48 chr10 130068872 130069188 -15520100 + AluSx SINE Alu 7 307 -5 357 189 22 78 chr10 130071466 130071556 -15517732 - L2 LINE L2 -3 3310 3226 396 286 163 17 chr10 130071855 130072149 -15517139 - MLT1I LTR MaLR -2 407 71 22 56 0 0 chr10 130073411 130073447 -15515841 + AT_rich Low_complexity Low_complexity 1 36 0 268 233 12 23 chr10 130075366 130075452 -15513836 + (TA)n Simple_repeat Simple_repeat 2 86 0 21 0 0 0 chr10 130078123 130078144 -15511144 + AT_rich Low_complexity Low_complexity 1 21 0 77 12 0 0 chr10 130078913 130078997 -15510291 + AT_rich Low_complexity Low_complexity 1 84 0 180 0 0 0 chr10 130079559 130079579 -15509709 + (TG)n Simple_repeat Simple_repeat 1 20 0 204 40 0 0 chr10 130080400 130080425 -15508863 + (A)n Simple_repeat Simple_repeat 1 25 0 1079 209 55 27 chr10 130080791 130081479 -15507809 + L1MD3 LINE L1 7170 7983 -12 2817 167 27 42 chr10 130082942 130083541 -15505747 + L1MB3 LINE L1 5593 6182 -1 216 67 0 0 chr10 130083675 130083705 -15505583 + (CA)n Simple_repeat Simple_repeat 1 30 0 231 132 19 0 chr10 130084758 130084811 -15504477 - L1ME4a LINE L1 -9 6112 6059 302 356 93 19 chr10 130084965 130085181 -15504107 - MIR SINE MIR -10 252 21 571 311 92 0 chr10 130085210 130085438 -15503850 - MIR SINE MIR 0 262 14 209 306 32 0 chr10 130086378 130086440 -15502848 + MER5C DNA MER1_type 13 76 -248 880 176 6 24 chr10 130086493 130086658 -15502630 + FRAM SINE Alu 1 162 -14 518 187 321 8 chr10 130087026 130087160 -15502128 + MER5A DNA MER1_type 1 176 -13 2219 98 3 3 chr10 130087172 130087468 -15501820 - AluSc SINE Alu -13 296 1 186 274 78 78 chr10 130087550 130087795 -15501493 + L2 LINE L2 2152 2396 -918 187 306 71 24 chr10 130088668 130088753 -15500535 + L2 LINE L2 3190 3278 -35 201 274 248 20 chr10 130089111 130089264 -15500024 + MIR3 SINE MIR 16 203 -5 441 272 74 51 chr10 130089460 130089696 -15499592 + MIR SINE MIR 5 249 -13 216 0 0 0 chr10 130090521 130090545 -15498743 + (TA)n Simple_repeat Simple_repeat 1 24 0 2212 130 7 0 chr10 130090573 130090880 -15498408 + AluSg SINE Alu 1 309 -1 270 366 78 7 chr10 130090911 130091049 -15498239 + MIR SINE MIR 18 163 -70 223 258 47 16 chr10 130091134 130091262 -15498026 + C-rich Low_complexity Low_complexity 3 134 0 210 37 0 0 chr10 130091342 130091369 -15497919 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 967 324 77 34 chr10 130092891 130093590 -15495698 + L2 LINE L2 2342 3070 -243 692 290 98 0 chr10 130096306 130096520 -15492768 + MIR SINE MIR 18 252 -10 673 238 17 17 chr10 130096742 130096914 -15492374 + MER69A DNA AcHobo 5 176 -1 346 226 43 21 chr10 130097226 130097319 -15491969 - L2 LINE L2 -15 3298 3204 396 296 124 35 chr10 130098999 130099168 -15490120 + MIR3 SINE MIR 18 201 -7 21 0 0 0 chr10 130100794 130100815 -15488473 + GC_rich Low_complexity Low_complexity 1 21 0 204 235 0 20 chr10 130101127 130101178 -15488110 + CT-rich Low_complexity Low_complexity 3 52 0 299 250 121 0 chr10 130101387 130101503 -15487785 - L2 LINE L2 -1 3312 3183 265 160 0 0 chr10 130101784 130101834 -15487454 + Alu SINE Alu 253 302 0 977 200 140 4 chr10 130101838 130102073 -15487215 + Tigger7 DNA MER2_type 1 267 -466 467 161 54 11 chr10 130102072 130102165 -15487123 + Tigger7 DNA MER2_type 2391 2487 0 * 1252 219 28 85 chr10 130102677 130103066 -15486222 - MLT1B LTR MaLR -23 367 1 2275 96 0 10 chr10 130103176 130103477 -15485811 + AluSq SINE Alu 1 298 -15 339 25 0 0 chr10 130104503 130104543 -15484745 + (TTG)n Simple_repeat Simple_repeat 2 41 0 2115 85 0 11 chr10 130104544 130104826 -15484462 - AluY SINE Alu -32 279 1 456 254 175 42 chr10 130105072 130105289 -15483999 - MIR SINE MIR -15 247 2 257 296 14 0 chr10 130105580 130105651 -15483637 + MIR SINE MIR 185 256 -6 180 368 138 0 chr10 130105736 130105823 -15483465 - L2 LINE L2 -21 3251 3153 219 341 68 11 chr10 130105921 130106009 -15483279 + L2 LINE L2 2929 3021 -251 979 291 57 25 chr10 130106030 130106058 -15483230 - L1ME LINE L1 -4286 1975 1949 2561 44 3 0 chr10 130106058 130106354 -15482934 - AluY SINE Alu -14 297 1 979 291 57 25 chr10 130106354 130106799 -15482489 - L1ME LINE L1 -4312 1949 1487 2710 206 60 45 chr10 130106804 130107300 -15481988 - L1ME1 LINE L1 -5 6956 6469 2483 64 0 0 chr10 130107300 130107595 -15481693 + AluY SINE Alu 1 295 -16 2710 206 60 45 chr10 130107595 130108009 -15481279 - L1ME1 LINE L1 -492 6469 5850 748 131 0 110 chr10 130108026 130108171 -15481117 - FRAM SINE Alu -11 165 37 2345 204 62 36 chr10 130108197 130108922 -15480366 - L1ME1 LINE L1 -1075 5866 5123 1286 253 55 44 chr10 130108938 130109382 -15479906 - L1ME1 LINE L1 -3461 3480 3063 1425 160 77 49 chr10 130109382 130109669 -15479619 + AluJo SINE Alu 1 295 -17 1286 253 55 44 chr10 130109669 130109852 -15479436 - L1ME1 LINE L1 -3878 3063 2883 582 254 45 18 chr10 130109835 130110055 -15479233 - L1ME1 LINE L1 -6181 242 17 * 1844 252 64 77 chr10 130110054 130110486 -15478802 - L1ME LINE L1 -4616 1464 1028 797 154 0 23 chr10 130110486 130110616 -15478672 + FLAM_C SINE Alu 1 127 -6 1844 252 64 77 chr10 130110616 130111652 -15477636 - L1ME LINE L1 -5052 1028 27 21 0 0 0 chr10 130112056 130112077 -15477211 + AT_rich Low_complexity Low_complexity 1 21 0 182 314 0 0 chr10 130112223 130112274 -15477014 - L2 LINE L2 -86 3186 3136 1660 59 5 0 chr10 130112345 130112564 -15476724 + L1PA13 LINE L1 5942 6161 -2 208 274 20 0 chr10 130112814 130112865 -15476423 + MIR3 SINE MIR 108 159 -49 21 36 0 0 chr10 130113228 130113256 -15476032 + AT_rich Low_complexity Low_complexity 1 28 0 28 0 0 0 chr10 130113376 130113404 -15475884 + AT_rich Low_complexity Low_complexity 1 28 0 530 353 54 13 chr10 130113734 130113986 -15475302 - MIR SINE MIR 0 262 3 389 252 28 9 chr10 130114036 130114143 -15475145 - MIR SINE MIR -17 245 137 202 200 22 0 chr10 130114149 130114194 -15475094 - MIR SINE MIR -94 168 123 307 277 42 67 chr10 130115391 130115510 -15473778 + MIR SINE MIR 75 190 -72 308 232 37 79 chr10 130115935 130116099 -15473189 + L1ME4a LINE L1 5954 6110 -11 189 74 0 0 chr10 130116116 130116143 -15473145 + (A)n Simple_repeat Simple_repeat 1 27 0 39 38 0 0 chr10 130116144 130116197 -15473091 + AT_rich Low_complexity Low_complexity 1 53 0 519 96 0 0 chr10 130118189 130118272 -15471016 + (TG)n Simple_repeat Simple_repeat 2 84 0 1181 119 0 0 chr10 130118690 130118849 -15470439 + AluSg/x SINE Alu 132 290 -22 1015 148 62 34 chr10 130118852 130119061 -15470227 + L1MB8 LINE L1 5964 6178 0 262 316 147 0 chr10 130121079 130121174 -15468114 + L2 LINE L2 3155 3263 -9 193 232 105 53 chr10 130121417 130121512 -15467776 + MIR SINE MIR 157 256 -6 833 236 0 20 chr10 130121977 130122172 -15467116 + MER58A DNA MER1_type 30 220 -4 577 263 197 10 chr10 130122176 130122374 -15466914 + MIR SINE MIR 17 251 -11 1917 222 47 15 chr10 130122457 130122989 -15466299 - MER74A LTR ERVL 0 558 10 280 216 49 20 chr10 130123012 130123114 -15466174 + (CATATA)n Simple_repeat Simple_repeat 4 108 0 315 0 0 0 chr10 130123145 130123180 -15466108 + (CA)n Simple_repeat Simple_repeat 2 36 0 544 266 6 40 chr10 130123609 130123782 -15465506 + L2 LINE L2 3146 3312 -1 2637 271 56 19 chr10 130124070 130125108 -15464180 + L1ME LINE L1 46 1120 -4960 2546 61 0 0 chr10 130125406 130125703 -15463585 - AluY SINE Alu -13 298 2 825 186 76 0 chr10 130125865 130126037 -15463251 + FAM SINE Alu 1 49 0 786 179 14 7 chr10 130126049 130126329 -15462959 + GA-rich Low_complexity Low_complexity 1 281 0 2565 62 0 0 chr10 130126421 130126727 -15462561 - AluY SINE Alu -5 306 1 569 253 118 36 chr10 130126739 130127189 -15462099 - L1M4 LINE L1 -743 5403 4917 234 269 121 53 chr10 130127195 130127477 -15461811 - L1M4 LINE L1 -1561 4585 4285 312 254 0 0 chr10 130128454 130128525 -15460763 - MIR SINE MIR -5 257 187 1501 249 65 14 chr10 130128526 130129015 -15460273 - LTR33 LTR ERVL -2 519 6 573 213 47 60 chr10 130129016 130129166 -15460122 - MIR SINE MIR -78 184 37 220 308 67 97 chr10 130129981 130130280 -15459008 + L2 LINE L2 2887 3176 -96 24 0 0 0 chr10 130132752 130132776 -15456512 + AT_rich Low_complexity Low_complexity 1 24 0 231 384 61 0 chr10 130132828 130132927 -15456361 + L2 LINE L2 3126 3230 -42 351 0 0 0 chr10 130132938 130132977 -15456311 + (CA)n Simple_repeat Simple_repeat 1 39 0 1394 217 26 33 chr10 130134020 130134324 -15454964 + AluJb SINE Alu 1 302 -10 338 304 143 0 chr10 130135204 130135329 -15453959 + MIR SINE MIR 22 161 -62 2131 137 7 0 chr10 130135333 130135625 -15453663 - AluSx SINE Alu -17 295 2 421 310 170 0 chr10 130135663 130135834 -15453454 - MIR SINE MIR 0 262 63 25 51 0 0 chr10 130136492 130136531 -15452757 + AT_rich Low_complexity Low_complexity 1 39 0 525 105 0 0 chr10 130137298 130137384 -15451904 + (GGAA)n Simple_repeat Simple_repeat 2 87 0 1874 176 3 3 chr10 130138106 130138512 -15450776 - AluJo SINE Alu 0 406 1 550 226 20 0 chr10 130138518 130138620 -15450668 - MER5A DNA MER1_type -77 112 9 216 0 0 0 chr10 130138684 130138708 -15450580 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1837 107 23 8 chr10 130138714 130138976 -15450312 - AluSg SINE Alu -44 266 1 222 118 0 0 chr10 130139229 130139263 -15450025 + (AATTG)n Simple_repeat Simple_repeat 5 38 0 376 223 75 0 chr10 130141680 130141774 -15447514 + MER5A DNA MER1_type 9 109 -80 490 246 90 8 chr10 130142120 130142254 -15447034 + MIR SINE MIR 11 155 -107 197 332 126 73 chr10 130142288 130142535 -15446753 - L2 LINE L2 -17 3255 2996 276 311 128 0 chr10 130142683 130142831 -15446457 + L1MEd LINE L1 85 251 -5868 183 363 113 31 chr10 130142966 130143126 -15446162 - L2 LINE L2 -575 2739 2567 301 260 29 29 chr10 130143628 130143732 -15445556 + MER5A DNA MER1_type 9 112 -77 382 187 93 0 chr10 130144343 130144418 -15444870 - L2 LINE L2 0 3313 3232 236 299 0 30 chr10 130145915 130145982 -15443306 + MIR SINE MIR 14 78 -184 435 187 9 19 chr10 130146032 130146139 -15443149 - L1MB4 LINE L1 -2 6178 6073 312 27 0 0 chr10 130146139 130146176 -15443112 + (TG)n Simple_repeat Simple_repeat 1 37 0 4419 198 46 19 chr10 130146313 130146819 -15442469 - L1MB4 LINE L1 0 6180 5689 1510 154 117 7 chr10 130146819 130147092 -15442196 - AluJb SINE Alu -5 307 5 4419 198 46 19 chr10 130147092 130147158 -15442130 - L1MB4 LINE L1 -491 5689 5626 1784 182 35 22 chr10 130147158 130147527 -15441761 + MLT1A2 LTR MaLR 1 374 0 4419 198 46 19 chr10 130147527 130149020 -15440268 - L1MB4 LINE L1 -554 5626 4071 621 239 21 58 chr10 130149171 130149414 -15439874 - L1ME3A LINE L1 -66 6104 5871 * 3317 156 130 111 chr10 130149408 130149902 -15439386 - L1MC3 LINE L1 -89 7696 7213 313 256 11 11 chr10 130149902 130149992 -15439296 - MLT1F1 LTR MaLR -443 124 35 3317 156 130 111 chr10 130149992 130150229 -15439059 - L1MC3 LINE L1 -572 7213 6982 1592 211 36 11 chr10 130150229 130150590 -15438698 + MLT1A2 LTR MaLR 5 374 0 3317 156 130 111 chr10 130150590 130150851 -15438437 - L1MC3 LINE L1 -803 6982 6593 415 273 63 7 chr10 130151219 130151362 -15437926 - MIR SINE MIR -56 206 56 195 180 0 80 chr10 130152073 130152123 -15437165 - MIR SINE MIR -101 161 116 180 0 0 0 chr10 130154121 130154141 -15435147 + (TTG)n Simple_repeat Simple_repeat 2 21 0 483 239 8 39 chr10 130154563 130154693 -15434595 + L2 LINE L2 3188 3313 0 289 264 32 147 chr10 130154779 130155007 -15434281 + MIR SINE MIR 25 234 -28 2152 107 0 0 chr10 130155294 130155575 -15433713 + AluSp SINE Alu 33 313 0 263 81 0 0 chr10 130157042 130157079 -15432209 + MER53 DNA DNA 22 58 -131 231 195 0 0 chr10 130157219 130157260 -15432028 - MIR SINE MIR -21 241 201 23 78 0 0 chr10 130157260 130157311 -15431977 + AT_rich Low_complexity Low_complexity 1 51 0 325 157 148 17 chr10 130157449 130157564 -15431724 - L1ME4a LINE L1 -1 6120 5991 225 169 0 119 chr10 130157790 130157824 -15431464 + L2 LINE L2 3262 3288 -25 2474 68 0 13 chr10 130157824 130158134 -15431154 - AluY SINE Alu -5 306 1 225 169 0 119 chr10 130158134 130158158 -15431130 + L2 LINE L2 3288 3313 0 471 271 68 0 chr10 130159101 130159234 -15430054 - MIR SINE MIR -11 251 110 1517 136 56 8 chr10 130159253 130159504 -15429784 + AluJb SINE Alu 1 263 -49 1674 175 68 43 chr10 130159573 130160059 -15429229 - Charlie1 DNA MER1_type 0 2761 2264 3158 215 130 15 chr10 130160064 130161540 -15427748 - L1ME1 LINE L1 -2 6164 4527 814 191 112 0 chr10 130161540 130161728 -15427560 + MER58C DNA MER1_type 1 209 -6 344 196 137 0 chr10 130161744 130161846 -15427442 - L1ME1 LINE L1 -1622 4524 4409 183 87 0 0 chr10 130161851 130161874 -15427414 - MER5A DNA MER1_type -166 23 1 375 360 105 13 chr10 130161942 130162181 -15427107 - L2 LINE L2 -615 2699 2439 372 22 0 0 chr10 130163190 130163235 -15426053 + (TA)n Simple_repeat Simple_repeat 1 45 0 405 293 30 24 chr10 130164588 130164752 -15424536 + L2 LINE L2 3149 3313 0 205 346 0 13 chr10 130167677 130167755 -15421533 - L2 LINE L2 0 3272 3196 243 169 0 0 chr10 130167842 130167913 -15421375 + (TGAG)n Simple_repeat Simple_repeat 4 74 0 531 98 20 20 chr10 130168416 130168518 -15420770 + (TAGA)n Simple_repeat Simple_repeat 3 104 0 238 343 50 109 chr10 130168736 130168937 -15420351 - L2 LINE L2 -78 3194 3006 1309 248 46 33 chr10 130169830 130170285 -15419003 - MLT1C LTR MaLR 0 467 7 281 324 90 14 chr10 130170433 130170578 -15418710 - MIR3 SINE MIR -30 178 23 195 42 0 0 chr10 130171700 130171724 -15417564 + (T)n Simple_repeat Simple_repeat 1 24 0 408 97 0 0 chr10 130173206 130173268 -15416020 + (TG)n Simple_repeat Simple_repeat 2 63 0 25 31 0 0 chr10 130174899 130174931 -15414357 + AT_rich Low_complexity Low_complexity 1 32 0 694 247 73 11 chr10 130175939 130176117 -15413171 - MER5A DNA MER1_type 0 189 1 434 302 99 6 chr10 130176377 130176559 -15412729 + MIR SINE MIR 37 235 -27 32 26 0 0 chr10 130176993 130177032 -15412256 + AT_rich Low_complexity Low_complexity 1 39 0 967 214 5 40 chr10 130177464 130177688 -15411600 - MER20 DNA MER1_type -1 218 3 3384 62 9 0 chr10 130178899 130179335 -15409953 + L1PA5 LINE L1 5709 6148 -6 21 0 0 0 chr10 130179335 130179356 -15409932 + AT_rich Low_complexity Low_complexity 1 21 0 289 271 99 26 chr10 130179524 130179675 -15409613 - L2 LINE L2 -48 3265 3104 685 202 295 12 chr10 130179685 130179943 -15409345 + MER58D DNA MER1_type 1 331 -55 241 234 0 0 chr10 130180030 130180077 -15409211 - L2 LINE L2 -261 3052 3006 208 199 206 81 chr10 130180043 130180179 -15409109 + MIR3 SINE MIR 13 165 -43 * 21 0 0 0 chr10 130181703 130181724 -15407564 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr10 130182338 130182361 -15406927 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr10 130182889 130182918 -15406370 + AT_rich Low_complexity Low_complexity 1 29 0 535 286 54 0 chr10 130183159 130183327 -15405961 + MIR SINE MIR 2 178 -84 301 303 0 22 chr10 130183342 130183431 -15405857 - L1MC4 LINE L1 -1339 6703 6617 351 232 34 23 chr10 130183435 130183873 -15405415 + (TA)n Simple_repeat Simple_repeat 1 442 0 219 239 37 28 chr10 130183820 130183929 -15405359 + (TATATG)n Simple_repeat Simple_repeat 4 113 0 * 376 340 61 14 chr10 130184123 130184270 -15405018 - L2 LINE L2 0 3272 3119 3803 151 30 14 chr10 130185104 130185828 -15403460 - L1MA7 LINE L1 0 6291 5556 183 184 0 0 chr10 130186008 130186046 -15403242 + (TA)n Simple_repeat Simple_repeat 1 38 0 420 279 55 48 chr10 130188240 130188405 -15400883 - MIR SINE MIR -19 243 78 252 0 0 0 chr10 130188424 130188452 -15400836 + (CA)n Simple_repeat Simple_repeat 1 28 0 22 0 0 0 chr10 130188651 130188673 -15400615 + AT_rich Low_complexity Low_complexity 1 22 0 474 296 25 10 chr10 130188713 130188909 -15400379 - L1ME LINE L1 -392 5729 5531 3308 84 13 7 chr10 130189012 130189474 -15399814 + L1PA14 LINE L1 5680 6144 -17 22 0 0 0 chr10 130189479 130189501 -15399787 + AT_rich Low_complexity Low_complexity 1 22 0 22 88 0 0 chr10 130189712 130189769 -15399519 + AT_rich Low_complexity Low_complexity 1 57 0 309 320 109 28 chr10 130190057 130190472 -15398816 - L1ME LINE L1 -1314 4832 4384 226 279 9 9 chr10 130190618 130190729 -15398559 + (TA)n Simple_repeat Simple_repeat 2 112 0 500 260 58 118 chr10 130191116 130191462 -15397826 - MLT1J LTR MaLR -128 383 59 2268 157 17 19 chr10 130191633 130192046 -15397242 - MSTB LTR MaLR 0 426 15 313 312 130 7 chr10 130192372 130192526 -15396762 - L1ME LINE L1 -2313 3833 3661 1225 25 6 0 chr10 130192705 130192862 -15396426 - L1P LINE L1 -4114 2032 1875 4681 17 0 0 chr10 130192862 130193399 -15395889 + L1PA2 LINE L1 5619 6155 0 24 53 0 0 chr10 130193545 130193583 -15395705 + AT_rich Low_complexity Low_complexity 1 38 0 328 353 50 5 chr10 130193595 130193796 -15395492 - L1ME LINE L1 -2869 3277 3068 321 238 138 62 chr10 130194170 130194410 -15394878 - L1 LINE L1 -3655 2491 2234 212 303 15 15 chr10 130194508 130194574 -15394714 - L2 LINE L2 -3 3310 3245 2196 115 28 28 chr10 130194625 130194989 -15394299 + THE1B LTR MaLR 1 364 0 259 231 20 0 chr10 130195063 130195131 -15394157 + MIR SINE MIR 99 166 -65 456 334 190 21 chr10 130195644 130196314 -15392974 + L2 LINE L2 2148 2930 -384 246 208 0 0 chr10 130196852 130196905 -15392383 + CT-rich Low_complexity Low_complexity 2 54 0 1412 189 52 36 chr10 130197064 130197371 -15391917 - AluJo SINE Alu 0 312 1 210 364 119 17 chr10 130199045 130199221 -15390067 + L2 LINE L2 3078 3271 -1 1109 105 29 0 chr10 130199496 130199668 -15389620 + L1PA11 LINE L1 5998 6174 0 216 0 0 0 chr10 130199839 130199863 -15389425 + (T)n Simple_repeat Simple_repeat 1 24 0 319 103 0 73 chr10 130200319 130200387 -15388901 + MER53 DNA DNA 93 155 -34 * 373 136 91 57 chr10 130200335 130200423 -15388865 - MER53 DNA DNA -98 91 1 243 288 0 14 chr10 130201010 130201083 -15388205 - MLT1J LTR MaLR -195 316 245 275 345 69 21 chr10 130201308 130201453 -15387835 + MIR3 SINE MIR 19 170 -38 1539 182 0 22 chr10 130201754 130202029 -15387259 + AluSx SINE Alu 33 301 -11 2240 100 0 10 chr10 130203560 130203859 -15385429 + AluSg SINE Alu 1 296 -14 236 330 11 11 chr10 130203877 130203968 -15385320 + MIR3 SINE MIR 118 208 0 458 252 170 0 chr10 130204903 130205038 -15384250 - MIR3 SINE MIR -9 199 42 290 338 25 30 chr10 130205043 130205244 -15384044 + MER112 DNA MER1_type 1 200 -60 1510 201 13 30 chr10 130205339 130205643 -15383645 + AluJo SINE Alu 1 299 -13 182 211 155 14 chr10 130208077 130208148 -15381140 + MIR SINE MIR 117 197 -65 593 261 108 65 chr10 130208382 130208934 -15380354 + L2 LINE L2 2560 3313 0 1026 237 9 56 chr10 130209441 130209778 -15379510 - MER46C DNA MER2_type 0 338 18 364 184 53 0 chr10 130209781 130209857 -15379431 + MER94 DNA DNA 1 80 -54 408 294 34 96 chr10 130210883 130211175 -15378113 + HAL1b LINE L1 1 274 -1074 495 145 0 0 chr10 130211181 130211264 -15378024 + (GGAA)n Simple_repeat Simple_repeat 2 84 0 321 360 43 12 chr10 130211268 130211590 -15377698 + HAL1b LINE L1 292 623 -725 1257 255 55 11 chr10 130211701 130212160 -15377128 + L1MC4a LINE L1 6542 7020 -788 497 179 155 61 chr10 130212127 130212424 -15376864 + L1MC5 LINE L1 7463 7787 -174 * 968 163 54 0 chr10 130212425 130212591 -15376697 + FRAM SINE Alu 2 176 0 240 224 0 0 chr10 130212704 130212753 -15376535 + MER94 DNA DNA 70 118 -16 500 296 123 0 chr10 130214265 130214444 -15374844 + MIR SINE MIR 6 206 -56 411 21 0 0 chr10 130215118 130215166 -15374122 + (TG)n Simple_repeat Simple_repeat 1 48 0 409 317 78 49 chr10 130215302 130215545 -15373743 - MIR SINE MIR 0 262 13 815 243 25 38 chr10 130216693 130216932 -15372356 + MIR SINE MIR 24 259 -3 192 250 87 65 chr10 130217466 130217558 -15371730 - L2 LINE L2 -162 3110 3017 478 256 212 34 chr10 130218903 130219285 -15370003 + L1ME LINE L1 4614 5063 -1083 264 286 59 37 chr10 130219383 130219682 -15369606 + L1ME LINE L1 5219 5524 -640 25 83 0 0 chr10 130219705 130219765 -15369523 + AT_rich Low_complexity Low_complexity 1 60 0 397 272 103 56 chr10 130219984 130220197 -15369091 + MIR SINE MIR 8 230 -32 1814 178 40 23 chr10 130221872 130222221 -15367067 + MLT1A1 LTR MaLR 1 355 -10 583 233 70 9 chr10 130222468 130222743 -15366545 - LTR16A LTR ERVL -10 440 120 1675 91 64 147 chr10 130223220 130223428 -15365860 - THE1C LTR MaLR 0 375 216 2164 129 3 0 chr10 130223428 130223722 -15365566 + AluSx SINE Alu 1 295 -17 1675 91 64 147 chr10 130223722 130223922 -15365366 - THE1C LTR MaLR -159 216 1 759 146 7 13 chr10 130224312 130224463 -15364825 + GA-rich Low_complexity Low_complexity 3 152 0 187 325 52 57 chr10 130227297 130227509 -15361779 - L2 LINE L2 -93 3179 2969 235 347 66 30 chr10 130227596 130227763 -15361525 - L2 LINE L2 -448 2866 2694 781 160 0 182 chr10 130229461 130229692 -15359596 - MER5A DNA MER1_type 0 189 1 751 136 8 0 chr10 130229787 130229905 -15359383 - FLAM_C SINE Alu -14 119 1 483 243 69 46 chr10 130230749 130230922 -15358366 - MLT1J2 LTR MaLR -7 443 267 354 300 23 37 chr10 130230953 130231136 -15358152 + MIR SINE MIR 12 192 -63 406 283 158 0 chr10 130231158 130231310 -15357978 + MER5A DNA MER1_type 9 184 -5 202 111 0 44 chr10 130232189 130232234 -15357054 + (TCCC)n Simple_repeat Simple_repeat 3 45 0 387 73 0 0 chr10 130232238 130232293 -15356995 + (CA)n Simple_repeat Simple_repeat 2 56 0 231 309 40 69 chr10 130233009 130233184 -15356104 + MIR SINE MIR 8 177 -85 624 204 167 0 chr10 130233250 130233412 -15355876 - MER5A DNA MER1_type 0 189 1 433 264 108 20 chr10 130233528 130233676 -15355612 + MIR SINE MIR 32 192 -70 326 224 0 13 chr10 130233750 130233826 -15355462 + MER116 DNA Mariner 6 80 0 318 258 0 0 chr10 130234484 130234573 -15354715 + (CATATA)n Simple_repeat Simple_repeat 3 91 0 386 266 79 7 chr10 130234579 130234718 -15354570 + L1ME4a LINE L1 4015 4163 -1983 807 213 0 30 chr10 130234748 130234912 -15354376 - FRAM SINE Alu -17 159 1 234 301 96 28 chr10 130235169 130235418 -15353870 + L1ME4a LINE L1 4501 4766 -1380 26 0 0 0 chr10 130235699 130235725 -15353563 + AT_rich Low_complexity Low_complexity 1 26 0 847 279 87 22 chr10 130235835 130236264 -15353024 + L1ME4a LINE L1 5284 5735 -386 975 176 11 16 chr10 130236330 130236517 -15352771 - MER5A DNA MER1_type -3 186 1 275 327 119 0 chr10 130236528 130236687 -15352601 + L1ME4a LINE L1 5870 6047 -74 25 0 0 0 chr10 130236699 130236724 -15352564 + AT_rich Low_complexity Low_complexity 1 25 0 1624 160 19 22 chr10 130236856 130237175 -15352113 - L1MB8 LINE L1 -2 6176 5859 2109 99 90 38 chr10 130238486 130238831 -15350457 + THE1B LTR MaLR 1 363 -1 205 191 64 0 chr10 130238914 130238961 -15350327 + CT-rich Low_complexity Low_complexity 3 52 0 5025 67 2 0 chr10 130239502 130240129 -15349159 + L1PA8 LINE L1 5531 6158 -14 21 0 0 0 chr10 130240129 130240150 -15349138 + AT_rich Low_complexity Low_complexity 1 21 0 180 194 0 0 chr10 130240586 130240622 -15348666 + MIR SINE MIR 154 189 -73 320 274 68 34 chr10 130240643 130240789 -15348499 - MIR SINE MIR -6 256 106 192 158 0 0 chr10 130241664 130241702 -15347586 + (GACTG)n Simple_repeat Simple_repeat 5 42 0 1408 264 165 0 chr10 130242968 130243465 -15345823 - L1ME3A LINE L1 0 6170 5592 391 307 89 13 chr10 130243767 130243992 -15345296 + MIR SINE MIR 3 244 -18 212 303 34 11 chr10 130244080 130244169 -15345119 - MIR3 SINE MIR -6 202 112 684 162 23 3 chr10 130244387 130244698 -15344590 + (CA)n Simple_repeat Simple_repeat 1 317 0 221 187 13 0 chr10 130244723 130244798 -15344490 + (CA)n Simple_repeat Simple_repeat 1 76 0 331 281 50 8 chr10 130244844 130244965 -15344323 - MIR SINE MIR -118 144 19 345 309 124 28 chr10 130245706 130245762 -15343526 - MER91A DNA MER1_type 0 196 147 3503 223 33 23 chr10 130245762 130246580 -15342708 - LTR1B LTR ERV1 0 826 1 345 309 124 28 chr10 130246580 130246701 -15342587 - MER91A DNA MER1_type -49 147 2 1174 221 90 29 chr10 130247485 130247706 -15341582 - MLT1F LTR MaLR -211 331 125 1958 154 76 15 chr10 130247706 130248049 -15341239 + THE1B LTR MaLR 1 364 0 12110 79 13 3 chr10 130248049 130249613 -15339675 + THE1B-int LTR MaLR 1 1580 0 2180 110 104 18 chr10 130249613 130249948 -15339340 + THE1B LTR MaLR 1 364 0 1174 221 90 29 chr10 130249948 130250036 -15339252 - MLT1F LTR MaLR -416 126 1 533 261 0 0 chr10 130250446 130250565 -15338723 - MER94 DNA DNA -8 126 8 290 236 193 1 chr10 130252624 130252739 -15336549 + MIR SINE MIR 20 151 -62 237 309 48 34 chr10 130252953 130253160 -15336128 - L1ME4a LINE L1 -181 5940 5731 2405 63 0 3 chr10 130253662 130253970 -15335318 - AluY SINE Alu 0 307 1 1948 224 86 27 chr10 130254072 130254620 -15334668 + MLT1E LTR MaLR 1 580 -13 893 200 34 24 chr10 130254830 130255035 -15334253 - MER3 DNA MER1_type 0 209 3 497 279 52 0 chr10 130256399 130256571 -15332717 + MIR SINE MIR 20 200 -62 2890 68 0 0 chr10 130256688 130257043 -15332245 + THE1A LTR MaLR 1 355 0 26 0 0 0 chr10 130257266 130257292 -15331996 + AT_rich Low_complexity Low_complexity 1 26 0 494 310 119 33 chr10 130257330 130257665 -15331623 - MLT1K LTR MaLR -123 465 102 254 307 13 0 chr10 130257748 130257823 -15331465 + L2 LINE L2 3197 3272 0 454 43 29 0 chr10 130258299 130258368 -15330920 + (TG)n Simple_repeat Simple_repeat 2 72 0 2106 120 0 0 chr10 130259120 130259445 -15329843 + AluSx SINE Alu 1 325 0 194 273 0 0 chr10 130259492 130259536 -15329752 + L2 LINE L2 3259 3302 -11 394 328 38 11 chr10 130260082 130260268 -15329020 - MIR SINE MIR -50 212 22 234 275 0 0 chr10 130261661 130261730 -15327558 + L2 LINE L2 2902 2970 -302 * 460 338 115 8 chr10 130261729 130261963 -15327325 - MIR SINE MIR -2 260 2 306 337 78 47 chr10 130262015 130262273 -15327015 + L2 LINE L2 2997 3262 -10 1855 178 13 3 chr10 130262296 130262696 -15326592 + AluJb SINE Alu 1 403 0 245 91 0 0 chr10 130262698 130262731 -15326557 + U2 snRNA snRNA 1 33 -155 414 227 28 0 chr10 130262733 130262874 -15326414 + GA-rich Low_complexity Low_complexity 4 148 0 501 193 28 28 chr10 130262905 130263081 -15326207 + GA-rich Low_complexity Low_complexity 3 178 0 242 91 0 0 chr10 130263094 130263127 -15326161 + U2 snRNA snRNA 1 33 -155 524 216 0 7 chr10 130263127 130263266 -15326022 + GA-rich Low_complexity Low_complexity 4 141 0 313 230 0 0 chr10 130264279 130264353 -15324935 + MIR SINE MIR 62 135 -73 333 146 60 0 chr10 130264482 130264633 -15324655 + (TA)n Simple_repeat Simple_repeat 2 161 0 307 168 71 0 chr10 130264650 130264763 -15324525 + (TA)n Simple_repeat Simple_repeat 2 122 0 419 114 60 12 chr10 130264763 130264929 -15324359 + (TTATA)n Simple_repeat Simple_repeat 1 174 0 419 166 65 6 chr10 130264935 130265104 -15324184 + (TA)n Simple_repeat Simple_repeat 2 180 0 216 239 26 34 chr10 130265052 130265169 -15324119 + (TATATG)n Simple_repeat Simple_repeat 4 119 0 * 345 231 139 0 chr10 130265173 130265281 -15324007 - MIR SINE MIR -105 157 35 421 306 82 0 chr10 130265818 130265965 -15323323 - MIR SINE MIR -12 250 92 642 281 57 4 chr10 130266271 130266499 -15322789 + MIR SINE MIR 9 248 -14 24 85 0 0 chr10 130269131 130269190 -15320098 + AT_rich Low_complexity Low_complexity 1 59 0 24 0 0 0 chr10 130269350 130269374 -15319914 + AT_rich Low_complexity Low_complexity 1 24 0 279 190 17 0 chr10 130269383 130269441 -15319847 - L1ME4a LINE L1 -83 6038 5980 976 284 29 19 chr10 130269511 130269718 -15319570 - L1ME4a LINE L1 -251 5870 5656 2806 123 2 50 chr10 130269718 130270173 -15319115 - Tigger2a DNA MER2_type -1 433 1 976 284 29 19 chr10 130270173 130270342 -15318946 - L1ME4a LINE L1 -465 5656 5490 559 248 115 37 chr10 130270933 130271203 -15318085 - L1ME4a LINE L1 -34 6087 5797 1806 42 0 28 chr10 130271435 130271652 -15317636 + AluY SINE Alu 19 229 -82 1985 68 4 4 chr10 130272606 130272880 -15316408 + AluY SINE Alu 37 310 0 956 292 194 14 chr10 130274268 130274891 -15314397 - L2 LINE L2 -600 2714 1980 307 208 42 0 chr10 130274904 130274976 -15314312 + L1MC/D LINE L1 5689 5763 -2045 3009 145 63 13 chr10 130274993 130275468 -15313820 - MER1A DNA MER1_type 0 529 31 477 286 40 47 chr10 130276060 130276361 -15312927 - HAL1b LINE L1 -535 813 515 1003 246 70 20 chr10 130276367 130276668 -15312620 - LTR16C LTR ERVL -2 489 174 232 317 8 32 chr10 130276989 130277112 -15312176 - HAL1b LINE L1 -1042 306 187 518 224 245 0 chr10 130278032 130278175 -15311113 + MER45A DNA AcHobo 1 178 0 827 182 27 0 chr10 130280696 130280844 -15308444 + MER45A DNA AcHobo 10 161 -17 386 209 155 0 chr10 130281044 130281150 -15308138 - MIR SINE MIR -44 164 39 1825 165 3 7 chr10 130281160 130281451 -15307837 - AluSx SINE Alu -20 292 3 1115 222 23 9 chr10 130281529 130281750 -15307538 - MER58A DNA MER1_type 0 224 1 1197 296 46 20 chr10 130281831 130282327 -15306961 - LTR33 LTR ERVL -2 519 11 2041 143 0 3 chr10 130282913 130283207 -15306081 + AluSx SINE Alu 1 293 -19 816 314 43 39 chr10 130283315 130283808 -15305480 + MLT1J LTR MaLR 9 503 -8 923 206 0 24 chr10 130283868 130284038 -15305250 + MER8 DNA MER2_type 74 239 0 265 274 103 64 chr10 130284163 130284205 -15305083 - MLT1J LTR MaLR -204 307 268 2649 128 62 7 chr10 130284205 130284611 -15304677 + MSTA LTR MaLR 1 428 0 265 274 103 64 chr10 130284611 130284718 -15304570 - MLT1J LTR MaLR -243 268 167 1811 184 82 29 chr10 130284718 130284917 -15304371 + MSTD LTR MaLR 1 188 -208 234 0 0 0 chr10 130284917 130284943 -15304345 + (TCC)n Simple_repeat Simple_repeat 3 28 0 189 0 0 0 chr10 130284945 130284966 -15304322 + (TC)n Simple_repeat Simple_repeat 1 21 0 1811 184 82 29 chr10 130284966 130285139 -15304149 + MSTD LTR MaLR 188 396 0 265 274 103 64 chr10 130285139 130285192 -15304096 - MLT1J LTR MaLR -344 167 96 432 316 0 0 chr10 130285649 130285782 -15303506 - MIR SINE MIR -24 238 106 1027 175 0 0 chr10 130286948 130287108 -15302180 - AluJo SINE Alu -24 288 129 685 171 36 0 chr10 130287129 130287240 -15302048 - AluJo SINE Alu -167 145 31 260 275 43 56 chr10 130287507 130287725 -15301563 - L2 LINE L2 -508 2806 2513 1185 178 82 81 chr10 130288167 130288587 -15300701 + MLT1C LTR MaLR 1 390 0 2437 82 0 0 chr10 130288625 130288917 -15300371 + AluSx SINE Alu 11 302 -10 288 70 0 0 chr10 130289522 130289565 -15299723 + (TC)n Simple_repeat Simple_repeat 1 43 0 258 289 24 0 chr10 130291874 130291957 -15297331 + (TGG)n Simple_repeat Simple_repeat 1 85 0 521 285 40 64 chr10 130292301 130292550 -15296738 + MIR SINE MIR 20 262 0 2933 60 16 5 chr10 130292551 130292921 -15296367 + L1PA8 LINE L1 5793 6166 -6 416 335 51 31 chr10 130292949 130293206 -15296082 + L2 LINE L2 2705 2966 -348 1927 136 23 10 chr10 130293220 130293522 -15295766 - AluSx SINE Alu -6 306 1 180 0 0 0 chr10 130293538 130293558 -15295730 + (CA)n Simple_repeat Simple_repeat 2 21 0 1704 202 109 103 chr10 130293561 130294456 -15294832 - L1MC5 LINE L1 -36 7925 7025 612 274 13 70 chr10 130294597 130294827 -15294461 - L1MC5 LINE L1 -1009 6952 6736 281 246 94 36 chr10 130294897 130294913 -15294375 - L1ME LINE L1 -328 5838 5823 604 159 45 115 chr10 130294913 130295170 -15294118 - L1MC5 LINE L1 -455 5711 5606 2717 249 80 51 chr10 130295176 130297277 -15292011 - L1ME LINE L1 -3477 2603 438 2575 56 3 0 chr10 130297277 130297580 -15291708 - AluY SINE Alu -7 304 1 2717 249 80 51 chr10 130297580 130298020 -15291268 - L1ME LINE L1 -5642 438 12 499 233 52 31 chr10 130298015 130298208 -15291080 - L1MC5 LINE L1 -2357 5451 5255 * 29 60 0 0 chr10 130298280 130298330 -15290958 + AT_rich Low_complexity Low_complexity 1 50 0 2450 107 13 61 chr10 130298355 130298747 -15290541 - L1PA11 LINE L1 -2 6172 5800 526 295 30 75 chr10 130298801 130299377 -15289911 - L1MC5 LINE L1 -1006 5140 4591 182 289 19 19 chr10 130299410 130299462 -15289826 + L2 LINE L2 2989 3040 -273 365 207 134 0 chr10 130299588 130299670 -15289618 + MIR3 SINE MIR 63 155 -53 3621 75 18 5 chr10 130299720 130300163 -15289125 + MLT2A2 LTR ERVL 5 453 0 609 255 134 76 chr10 130300372 130300752 -15288536 + MLT1H LTR MaLR 123 524 -25 663 271 103 79 chr10 130301199 130301704 -15287584 + MLT1K LTR MaLR 67 583 -5 213 274 69 29 chr10 130301768 130301870 -15287418 + L2 LINE L2 3158 3263 -9 295 137 59 0 chr10 130301908 130301959 -15287329 + MIR SINE MIR 111 164 -98 22 0 0 0 chr10 130302122 130302144 -15287144 + AT_rich Low_complexity Low_complexity 1 22 0 220 293 20 50 chr10 130303788 130303887 -15285401 + MIR SINE MIR 141 236 -26 338 109 219 0 chr10 130304852 130304916 -15284372 - MADE1 DNA Mariner -2 78 1 34 108 0 0 chr10 130304961 130305100 -15284188 + AT_rich Low_complexity Low_complexity 1 139 0 25 0 0 0 chr10 130305262 130305287 -15284001 + AT_rich Low_complexity Low_complexity 1 25 0 1725 197 0 3 chr10 130305451 130305756 -15283532 - AluJo SINE Alu -8 304 1 219 296 13 7 chr10 130305756 130305835 -15283453 - MIR SINE MIR -66 142 73 22 0 0 0 chr10 130307303 130307325 -15281963 + AT_rich Low_complexity Low_complexity 1 22 0 2323 157 19 16 chr10 130307555 130307919 -15281369 + MLT1A1 LTR MaLR 1 365 0 286 291 20 20 chr10 130308040 130308156 -15281132 + MIR SINE MIR 17 133 -75 2049 112 25 7 chr10 130308328 130308613 -15280675 + AluSp SINE Alu 1 290 -23 185 0 40 0 chr10 130310127 130310152 -15279136 + (TG)n Simple_repeat Simple_repeat 2 27 0 3893 213 28 36 chr10 130310880 130311958 -15277330 - L1ME3 LINE L1 -11 6220 5146 * 4561 250 78 19 chr10 130311939 130312078 -15277210 - L1ME3 LINE L1 -2184 4031 3902 491 101 51 38 chr10 130312078 130312157 -15277131 - MADE1 DNA Mariner 0 80 1 4561 250 78 19 chr10 130312157 130313629 -15275659 - L1ME3 LINE L1 -2313 3902 2320 2305 156 45 0 chr10 130313629 130314026 -15275262 + L1MA9 LINE L1 5898 6312 0 4561 250 78 19 chr10 130314026 130314060 -15275228 - L1ME3 LINE L1 -3895 2320 2289 230 235 112 31 chr10 130314061 130314159 -15275129 - L1ME3 LINE L1 -3883 2332 2227 1066 214 0 0 chr10 130314159 130314360 -15274928 + MER3 DNA MER1_type 1 201 -8 1857 277 128 30 chr10 130314379 130315633 -15273655 - L1ME3 LINE L1 -4128 2268 881 2008 123 0 0 chr10 130315633 130315954 -15273334 - AluSx SINE Alu 0 321 1 1857 277 128 30 chr10 130315954 130315987 -15273301 - L1ME3 LINE L1 -5515 881 853 1774 167 0 10 chr10 130316011 130316299 -15272989 + AluSx SINE Alu 3 287 -25 23 68 0 0 chr10 130316299 130316343 -15272945 + AT_rich Low_complexity Low_complexity 1 44 0 314 297 94 86 chr10 130316677 130317027 -15272261 - L1ME3 LINE L1 -5616 589 237 1275 186 98 5 chr10 130317041 130317337 -15271951 - MER2 DNA MER2_type -8 337 15 442 309 37 60 chr10 130317672 130317889 -15271399 + MIR SINE MIR 23 234 -28 281 303 130 55 chr10 130318574 130319191 -15270097 + L1M4 LINE L1 3220 3882 -2264 324 303 76 0 chr10 130319207 130319339 -15269949 + MIR SINE MIR 3 144 -118 1434 238 41 61 chr10 130319350 130319842 -15269446 + MER74B LTR ERVL 66 547 -75 323 169 34 56 chr10 130319768 130319857 -15269431 - MER88 LTR ERVL -299 165 79 * 421 248 26 34 chr10 130319902 130320019 -15269269 + MIR SINE MIR 133 248 -14 234 292 122 0 chr10 130320039 130320172 -15269116 + L1M4 LINE L1 3881 4033 -2113 1088 229 48 113 chr10 130320623 130321064 -15268224 + L1MC4 LINE L1 6287 6783 -1110 3321 193 72 37 chr10 130321077 130322029 -15267259 + L1MC4 LINE L1 7069 8042 0 1228 258 92 73 chr10 130322035 130322608 -15266680 + MLT1G LTR MaLR 7 590 0 490 272 24 8 chr10 130322656 130322781 -15266507 - MIR SINE MIR -79 183 57 363 301 11 0 chr10 130322870 130322963 -15266325 - L2 LINE L2 -55 3258 3165 227 320 48 16 chr10 130323825 130323950 -15265338 - MIR SINE MIR -127 135 7 551 294 64 44 chr10 130324413 130324756 -15264532 + L2 LINE L2 2326 2675 -639 1779 181 23 0 chr10 130324765 130325068 -15264220 - AluJb SINE Alu -2 310 1 748 112 0 0 chr10 130325079 130325177 -15264111 - AluSg/x SINE Alu -14 298 201 191 135 135 0 chr10 130325177 130325214 -15264074 + L2 LINE L2 3233 3274 -39 1510 160 93 44 chr10 130325795 130326226 -15263062 - MER31A LTR ERV1 -1 542 1 219 211 0 0 chr10 130326803 130326841 -15262447 + polypyrimidine Low_complexity Low_complexity 1 38 0 2453 92 3 0 chr10 130326874 130327180 -15262108 + AluSq SINE Alu 1 307 -6 1069 75 0 0 chr10 130327637 130327771 -15261517 + AluSg/x SINE Alu 178 311 -1 447 213 99 71 chr10 130327816 130328027 -15261261 + MLT1K LTR MaLR 372 588 0 635 289 58 10 chr10 130328283 130328491 -15260797 - MIR SINE MIR -5 257 40 316 286 18 71 chr10 130328632 130328744 -15260544 + L1MDa LINE L1 571 987 -5553 473 248 144 26 chr10 130328793 130328946 -15260342 + MIR SINE MIR 7 177 -85 644 223 34 23 chr10 130329125 130329300 -15259988 + MER5B DNA MER1_type 1 177 -1 1401 245 30 5 chr10 130330445 130330845 -15258443 + Charlie4a DNA MER1_type 30 439 -69 2547 222 65 48 chr10 130330847 130331636 -15257652 + L1MDa LINE L1 19 820 -5720 975 234 40 22 chr10 130331981 130332254 -15257034 + L1M4 LINE L1 3519 3796 -2350 507 200 47 7 chr10 130332633 130332783 -15256505 + Charlie4a DNA MER1_type 280 435 -73 269 109 22 0 chr10 130332867 130332913 -15256375 + (TTA)n Simple_repeat Simple_repeat 3 49 0 4768 243 53 27 chr10 130333375 130334950 -15254338 + L1M4 LINE L1 2943 4559 -1587 1472 256 43 17 chr10 130335244 130335666 -15253622 + LTR16A LTR ERVL 16 448 -2 1400 139 0 0 chr10 130335809 130336010 -15253278 + AluSq SINE Alu 103 303 -10 2804 283 57 9 chr10 130336258 130337121 -15252167 + HERV16 LTR ERVL 1690 2593 -2403 961 118 0 15 chr10 130338222 130338357 -15250931 - FLAM_C SINE Alu 0 133 1 467 271 0 16 chr10 130338563 130338685 -15250603 + MIR3 SINE MIR 59 178 -30 190 83 0 83 chr10 130339409 130339469 -15249819 + (GGGA)n Simple_repeat Simple_repeat 2 56 0 473 286 7 36 chr10 130339714 130339854 -15249434 + MIR SINE MIR 2 137 -125 931 260 54 7 chr10 130339860 130340166 -15249122 + MLT1H LTR MaLR 5 325 -224 2108 129 17 165 chr10 130340305 130340832 -15248456 + LTR32 LTR ERVL 21 469 -2 351 96 0 0 chr10 130340834 130340886 -15248402 + MLT1H LTR MaLR 497 548 -1 852 155 61 0 chr10 130340975 130341123 -15248165 - LTR32 LTR ERVL -292 179 23 209 132 0 26 chr10 130341129 130341167 -15248121 + (TTA)n Simple_repeat Simple_repeat 3 39 0 369 294 150 12 chr10 130341182 130341342 -15247946 + MIR SINE MIR 7 188 -74 459 0 0 0 chr10 130341702 130341753 -15247535 + (TTTTG)n Simple_repeat Simple_repeat 5 55 0 2079 125 0 0 chr10 130341753 130342033 -15247255 - AluSx SINE Alu -32 280 1 413 287 0 9 chr10 130342112 130342220 -15247068 - MER5B DNA MER1_type -67 111 5 661 298 126 0 chr10 130342524 130342762 -15246526 - L2 LINE L2 -40 3273 3006 410 293 59 81 chr10 130343784 130344186 -15245102 + MLT1L LTR MaLR 118 612 -3 213 339 50 38 chr10 130344311 130344550 -15244738 + L2 LINE L2 2546 2787 -527 551 271 138 29 chr10 130344574 130344784 -15244504 + MIR SINE MIR 11 243 -19 247 278 58 78 chr10 130344840 130344974 -15244314 + L2 LINE L2 2864 2994 -278 2325 118 0 0 chr10 130344974 130345278 -15244010 + AluSx SINE Alu 1 304 -8 247 278 58 78 chr10 130345278 130345348 -15243940 + L2 LINE L2 2994 3064 -208 1729 186 29 10 chr10 130349848 130350154 -15239134 - AluJb SINE Alu 0 312 1 2200 107 0 4 chr10 130350469 130350750 -15238538 - AluSg SINE Alu -30 280 1 622 213 75 75 chr10 130350770 130350944 -15238344 + MER5B DNA MER1_type 5 178 0 184 171 86 0 chr10 130352027 130352062 -15237226 - L2 LINE L2 -14 3299 3262 228 111 0 0 chr10 130352072 130352108 -15237180 + (CA)n Simple_repeat Simple_repeat 1 36 0 1698 171 21 7 chr10 130356013 130356166 -15233122 - AluJb SINE Alu -28 284 124 2401 87 3 0 chr10 130356166 130356466 -15232822 - AluSc SINE Alu -8 301 1 1698 171 21 7 chr10 130356466 130356592 -15232696 - AluJb SINE Alu -188 124 1 359 305 113 21 chr10 130357824 130358063 -15231225 - MIR SINE MIR 0 262 2 5576 91 38 7 chr10 130358288 130359044 -15230244 - LTR17 LTR ERV1 0 780 1 276 336 112 0 chr10 130359788 130359931 -15229357 + MIR SINE MIR 49 207 -55 2145 113 0 3 chr10 130359933 130360236 -15229052 + AluSx SINE Alu 3 304 0 2596 74 0 3 chr10 130361182 130361494 -15227794 + AluY SINE Alu 1 311 0 531 315 17 11 chr10 130362429 130362610 -15226678 + MER5A DNA MER1_type 7 188 -1 255 210 0 0 chr10 130363027 130363094 -15226194 - L1MC/D LINE L1 -548 5757 5694 386 296 17 45 chr10 130364136 130364312 -15224976 + MIR3 SINE MIR 30 200 -8 364 241 221 14 chr10 130365176 130365321 -15223967 + MER5A DNA MER1_type 9 183 -6 369 0 0 0 chr10 130365633 130365674 -15223614 + (TG)n Simple_repeat Simple_repeat 2 42 0 320 318 0 27 chr10 130365899 130366009 -15223279 - L1ME1 LINE L1 -268 5898 5792 1222 111 22 0 chr10 130366196 130366377 -15222911 - L1PA15 LINE L1 0 6165 5981 2609 178 7 72 chr10 130366712 130367298 -15221990 - MER52A LTR ERV1 0 1755 1208 356 221 23 69 chr10 130367278 130367409 -15221879 - LTR28 LTR ERV1 -310 710 586 * 304 269 0 0 chr10 130367399 130367466 -15221822 - MER52A LTR ERV1 -406 1349 1283 * 1324 184 12 51 chr10 130367560 130368022 -15221266 - MER52A LTR ERV1 -523 1232 651 360 214 27 0 chr10 130368333 130368445 -15220843 + GA-rich Low_complexity Low_complexity 2 116 0 203 283 38 0 chr10 130368466 130368519 -15220769 + (TGGA)n Simple_repeat Simple_repeat 2 56 0 367 229 57 25 chr10 130368942 130369064 -15220224 - MIR SINE MIR -67 141 16 229 283 0 0 chr10 130370643 130370703 -15218585 + MIR SINE MIR 203 262 0 265 308 39 0 chr10 130370748 130370826 -15218462 - MIR SINE MIR -67 141 61 649 219 27 7 chr10 130371022 130371168 -15218120 + MIR SINE MIR 5 153 -109 17182 78 9 11 chr10 130371197 130373165 -15216123 - HERVK9 LTR ERVK -3130 2786 764 187 250 0 83 chr10 130373165 130373225 -15216063 - MER5B DNA MER1_type -69 109 55 17182 78 9 11 chr10 130373225 130373988 -15215300 - HERVK9 LTR ERVK -5152 764 1 3913 104 6 2 chr10 130373988 130374497 -15214791 - MER9 LTR ERVK 0 511 1 251 254 17 0 chr10 130374526 130374585 -15214703 + MIR SINE MIR 203 262 0 2212 115 0 0 chr10 130375343 130375639 -15213649 + AluSx SINE Alu 1 296 -16 2194 128 0 6 chr10 130375712 130376024 -15213264 - AluSx SINE Alu -2 310 1 201 132 0 0 chr10 130376356 130376394 -15212894 + (TA)n Simple_repeat Simple_repeat 2 39 0 243 299 26 0 chr10 130376410 130376487 -15212801 + L3 LINE CR1 1145 1223 -354 230 344 15 61 chr10 130377003 130377134 -15212154 + L3 LINE CR1 875 999 -578 1710 173 3 11 chr10 130377174 130377458 -15211830 - AluJo SINE Alu -30 282 1 356 276 58 68 chr10 130377488 130377782 -15211506 + MLT1K LTR MaLR 188 478 -110 2393 63 33 0 chr10 130377889 130378188 -15211100 + AluY SINE Alu 1 309 -2 188 298 128 45 chr10 130378216 130378505 -15210783 - L2 LINE L2 -435 2879 2567 2402 81 0 0 chr10 130380896 130381193 -15208095 + AluY SINE Alu 1 297 -14 2375 90 3 0 chr10 130381238 130381537 -15207751 + AluSx SINE Alu 1 300 -12 920 259 89 53 chr10 130381549 130381963 -15207325 + MLT1J2 LTR MaLR 1 429 -21 1622 108 70 51 chr10 130382453 130382767 -15206521 + THE1C LTR MaLR 2 321 -54 320 132 0 0 chr10 130382767 130382820 -15206468 - MADE1 DNA Mariner 0 80 28 337 161 18 0 chr10 130382823 130382879 -15206409 + THE1C LTR MaLR 319 375 0 465 255 45 78 chr10 130382879 130383122 -15206166 + MER76 LTR ERV 424 658 -30 188 305 21 21 chr10 130383509 130383604 -15205684 - L2 LINE L2 -923 2391 2297 3411 123 53 6 chr10 130383773 130384302 -15204986 + MER41C LTR ERV1 1 554 0 4219 129 15 76 chr10 130384579 130384992 -15204296 - LTR39 LTR ERV1 0 783 439 2286 112 3 0 chr10 130384992 130385296 -15203992 + AluSx SINE Alu 1 305 -7 4219 129 15 76 chr10 130385296 130385667 -15203621 - LTR39 LTR ERV1 -344 439 47 397 267 0 0 chr10 130386160 130386250 -15203038 + MIR SINE MIR 42 131 -77 21 0 0 0 chr10 130386489 130386510 -15202778 + AT_rich Low_complexity Low_complexity 1 21 0 1743 155 75 4 chr10 130386522 130386800 -15202488 + AluSx SINE Alu 3 300 -12 1930 157 0 0 chr10 130386803 130387084 -15202204 + AluSx SINE Alu 1 281 -31 505 247 41 34 chr10 130387088 130387234 -15202054 - MIR SINE MIR -24 184 38 611 221 9 0 chr10 130387319 130387432 -15201856 + MER81 DNA DNA 1 114 0 2153 234 45 14 chr10 130387452 130388028 -15201260 - L1M4 LINE L1 -3199 2947 2354 230 355 28 0 chr10 130389170 130389277 -15200011 - LTR67 LTR ERVL -350 207 98 201 273 0 39 chr10 130389546 130389623 -15199665 + GA-rich Low_complexity Low_complexity 4 77 0 270 22 133 22 chr10 130389638 130389683 -15199605 - MLT2A2 LTR ERVL 0 453 404 992 151 0 0 chr10 130389683 130389829 -15199459 + AluSp SINE Alu 150 295 -18 376 229 123 56 chr10 130390346 130390525 -15198763 + LTR27 LTR ERV1 446 636 0 22 35 0 0 chr10 130390825 130390854 -15198434 + AT_rich Low_complexity Low_complexity 1 29 0 194 339 123 0 chr10 130392656 130392721 -15196567 + L2 LINE L2 3168 3240 -32 2266 109 3 3 chr10 130393364 130393666 -15195622 + AluSx SINE Alu 1 302 -10 1282 199 40 98 chr10 130394045 130394411 -15194877 + MLT1A2 LTR MaLR 1 344 -30 2169 153 105 18 chr10 130394411 130394810 -15194478 - Tigger2a DNA MER2_type 0 434 1 1282 199 40 98 chr10 130394810 130394840 -15194448 + MLT1A2 LTR MaLR 344 374 0 1600 154 3 83 chr10 130395385 130395723 -15193565 - AluJo SINE Alu 0 312 2 234 301 68 0 chr10 130395765 130395838 -15193450 - MIR SINE MIR -111 151 74 246 257 108 0 chr10 130396183 130396257 -15193031 + L2 LINE L2 3200 3281 -32 226 340 29 33 chr10 130396309 130396453 -15192835 + MIR3 SINE MIR 29 172 -36 2175 119 0 0 chr10 130396586 130396879 -15192409 - AluSx SINE Alu -19 293 1 1039 190 5 0 chr10 130397620 130397804 -15191484 - MER52A LTR ERV1 0 1755 1571 * 5525 181 111 22 chr10 130397793 130399008 -15190280 - MER52A LTR ERV1 -64 1214 1 1595 149 63 29 chr10 130399338 130399686 -15189602 - Charlie1 DNA MER1_type 0 2761 2402 * 3029 191 76 25 chr10 130399662 130400357 -15188931 - Charlie1 DNA MER1_type -500 2261 1531 242 254 0 18 chr10 130400391 130400446 -15188842 - Charlie1 DNA MER1_type -2693 68 15 22 0 0 0 chr10 130400639 130400661 -15188627 + AT_rich Low_complexity Low_complexity 1 22 0 770 224 7 0 chr10 130400963 130401115 -15188173 + MER3 DNA MER1_type 1 153 -56 262 267 194 19 chr10 130401383 130401455 -15187833 - L1ME4a LINE L1 -12 6109 6051 2521 62 13 0 chr10 130401455 130401762 -15187526 + AluY SINE Alu 1 311 0 262 267 194 19 chr10 130401762 130401947 -15187341 - L1ME4a LINE L1 -70 6051 5807 2438 75 0 0 chr10 130402106 130402401 -15186887 - AluY SINE Alu -15 296 2 252 279 186 29 chr10 130402488 130402628 -15186660 + MER5A DNA MER1_type 1 162 -27 1192 247 69 57 chr10 130402928 130403426 -15185862 + L1MCc LINE L1 17 1070 -5353 262 285 0 119 chr10 130403684 130403835 -15185453 + L1MCc LINE L1 698 830 -5593 640 245 43 27 chr10 130403880 130404064 -15185224 + MER58A DNA MER1_type 1 187 -37 2415 71 7 0 chr10 130404064 130404373 -15184915 - AluY SINE Alu 0 311 1 877 198 74 46 chr10 130404373 130404694 -15184594 + L1MCc LINE L1 1240 1566 -4856 2362 88 3 0 chr10 130405030 130405325 -15183963 + AluSp SINE Alu 1 296 -17 2084 180 43 43 chr10 130407493 130407581 -15181707 + Tigger7 DNA MER2_type 2 89 -644 2404 71 3 19 chr10 130407581 130407889 -15181399 - AluSp SINE Alu -10 303 1 2084 180 43 43 chr10 130407889 130408239 -15181049 + Tigger7 DNA MER2_type 88 440 -293 1932 152 26 31 chr10 130408224 130408573 -15180715 + MER66B LTR ERV1 6 352 -134 * 301 278 171 6 chr10 130408586 130408762 -15180526 - L1MEc LINE L1 -4106 2290 2086 285 239 116 43 chr10 130408971 130409109 -15180179 - L1MEc LINE L1 -4614 1782 1635 2011 115 35 7 chr10 130409277 130409565 -15179723 - AluSg1 SINE Alu -13 296 1 1924 165 0 0 chr10 130410686 130410983 -15178305 + AluJb SINE Alu 1 297 -15 188 326 178 7 chr10 130411863 130411998 -15177290 - L2 LINE L2 -3 3269 3112 1838 146 0 23 chr10 130412608 130412910 -15176378 + AluJb SINE Alu 2 296 -16 470 206 84 38 chr10 130413080 130413211 -15176077 + L1MC4a LINE L1 5674 5810 -1998 214 269 0 0 chr10 130413219 130413271 -15176017 - L2 LINE L2 -693 2621 2570 1853 88 92 0 chr10 130413772 130414022 -15175266 - AluSc SINE Alu -10 299 27 533 143 0 0 chr10 130414101 130414178 -15175110 + MADE1 DNA Mariner 4 80 0 226 283 109 11 chr10 130416708 130416800 -15172488 - MIR3 SINE MIR -42 166 66 1268 211 134 29 chr10 130416972 130417447 -15171841 + L1MC4a LINE L1 5818 6356 -1452 1565 210 166 5 chr10 130417470 130417855 -15171433 - L2 LINE L2 -486 2828 2382 1040 256 62 22 chr10 130417916 130418236 -15171052 + LTR16C LTR ERVL 89 421 -70 442 271 29 7 chr10 130418253 130418393 -15170895 + MER113 DNA MER1_type? 328 470 -51 1663 183 10 16 chr10 130419189 130419495 -15169793 + AluJb SINE Alu 1 304 -8 308 191 118 27 chr10 130419671 130419781 -15169507 - L1ME4a LINE L1 -56 6065 5946 285 186 0 86 chr10 130420025 130420095 -15169193 - Charlie8 DNA MER1_type -1015 1402 1349 355 241 135 45 chr10 130420458 130420591 -15168697 + L2 LINE L2 3168 3312 -1 1023 170 27 27 chr10 130420834 130421022 -15168266 + MER5A DNA MER1_type 1 188 -1 21 0 0 0 chr10 130421281 130421302 -15167986 + AT_rich Low_complexity Low_complexity 1 21 0 3297 123 77 53 chr10 130421644 130421849 -15167439 + Tigger3(Golem) DNA MER2_type 2348 2547 -482 1468 146 174 12 chr10 130421849 130422102 -15167186 - AluJb SINE Alu -8 294 1 3297 123 77 53 chr10 130422102 130422560 -15166728 + Tigger3(Golem) DNA MER2_type 2547 3027 -2 204 40 0 0 chr10 130423922 130423947 -15165341 + (CCCCCA)n Simple_repeat Simple_repeat 5 29 0 812 248 146 41 chr10 130423968 130424377 -15164911 + HAL1 LINE L1 645 1140 -1367 2048 76 21 14 chr10 130424377 130424667 -15164621 + AluY SINE Alu 3 294 -17 812 248 146 41 chr10 130424667 130424865 -15164423 + HAL1 LINE L1 1140 1316 -1191 692 267 89 12 chr10 130424889 130425136 -15164152 + HAL1 LINE L1 1491 1756 -751 617 276 123 59 chr10 130425149 130425322 -15163966 + HAL1 LINE L1 1817 1977 -530 2140 117 0 7 chr10 130425322 130425630 -15163658 + AluSx SINE Alu 1 306 -6 617 276 123 59 chr10 130425630 130425787 -15163501 + HAL1 LINE L1 1977 2122 -385 1906 149 0 0 chr10 130425787 130426083 -15163205 + AluSx SINE Alu 1 296 -16 617 276 123 59 chr10 130426083 130426104 -15163184 + HAL1 LINE L1 2122 2140 -367 2420 69 0 0 chr10 130426104 130426408 -15162880 + AluY SINE Alu 1 304 -7 617 276 123 59 chr10 130426408 130426702 -15162586 + HAL1 LINE L1 2140 2506 -1 226 139 0 0 chr10 130428006 130428042 -15161246 + AluSq SINE Alu 1 36 -272 462 330 57 0 chr10 130428277 130428507 -15160781 + ERVL LTR ERVL 961 1203 -4561 2447 222 101 73 chr10 130428557 130428949 -15160339 + L1ME1 LINE L1 1079 1459 -4756 1806 103 4 4 chr10 130428949 130429212 -15160076 + AluSq SINE Alu 44 306 -7 2447 222 101 73 chr10 130429212 130429533 -15159755 + L1ME1 LINE L1 1459 1770 -4445 1331 156 15 52 chr10 130429533 130429563 -15159725 + L1MB5 LINE L1 5909 5939 -235 2242 93 3 3 chr10 130429563 130429875 -15159413 + AluSp SINE Alu 1 312 -1 1331 156 15 52 chr10 130429875 130430114 -15159174 + L1MB5 LINE L1 5939 6168 -6 2447 222 101 73 chr10 130430114 130430136 -15159152 + L1ME1 LINE L1 1770 1790 -4425 1979 119 0 0 chr10 130430136 130430413 -15158875 - AluSg SINE Alu -33 277 1 2447 222 101 73 chr10 130430413 130430735 -15158553 + L1ME1 LINE L1 1790 2102 -4113 2117 98 3 14 chr10 130430735 130431031 -15158257 + AluSx SINE Alu 1 293 -19 2447 222 101 73 chr10 130431031 130431316 -15157972 + L1ME1 LINE L1 2102 2426 -3789 2213 71 0 45 chr10 130431316 130431626 -15157662 + AluY SINE Alu 1 296 -15 2447 222 101 73 chr10 130431626 130431739 -15157549 + L1ME1 LINE L1 2426 2534 -3681 1728 205 74 26 chr10 130431746 130432342 -15156946 + L1ME1 LINE L1 4894 5517 -757 1747 122 81 7 chr10 130432354 130432649 -15156639 + MER1B DNA MER1_type 1 317 -22 1544 210 68 125 chr10 130432662 130433262 -15156026 + L1ME1 LINE L1 5526 6087 -148 1922 166 0 0 chr10 130433262 130433570 -15155718 + AluSx SINE Alu 1 308 -4 1544 210 68 125 chr10 130433570 130433626 -15155662 + L1ME1 LINE L1 6087 6145 -90 1545 245 75 8 chr10 130433626 130434014 -15155274 + LTR40c LTR ERVL 1 414 -51 1349 149 9 5 chr10 130434017 130434231 -15155057 + MER46A DNA MER2_type 22 236 0 200 226 12 60 chr10 130434349 130434433 -15154855 + GA-rich Low_complexity Low_complexity 1 80 0 27 0 0 0 chr10 130434566 130434593 -15154695 + AT_rich Low_complexity Low_complexity 1 27 0 1100 308 65 33 chr10 130434839 130435504 -15153784 + ERVL LTR ERVL 1643 2393 -3371 2192 76 14 0 chr10 130435504 130435794 -15153494 + AluSx SINE Alu 1 294 -18 1100 308 65 33 chr10 130435794 130436170 -15153118 + ERVL LTR ERVL 2393 2756 -3008 312 333 24 32 chr10 130436172 130436295 -15152993 - L1ME LINE L1 -621 5545 5424 1118 94 6 0 chr10 130436298 130436458 -15152830 - L1MA2 LINE L1 -1 6303 6143 1439 310 124 21 chr10 130436501 130438206 -15151082 - L1ME LINE L1 -753 5393 3514 465 279 86 80 chr10 130438231 130438532 -15150756 - L1ME LINE L1 -2724 3422 3120 247 196 18 0 chr10 130439683 130439739 -15149549 + G-rich Low_complexity Low_complexity 6 62 0 2171 64 13 17 chr10 130441178 130441476 -15147812 + AluY SINE Alu 1 297 -14 1531 157 42 0 chr10 130441480 130441767 -15147521 + AluJo SINE Alu 1 299 -13 757 308 73 5 chr10 130442049 130442141 -15147147 + L1M4 LINE L1 2470 2554 -3592 1410 202 181 23 chr10 130442141 130442577 -15146711 + MLT1D LTR MaLR 1 505 0 757 308 73 5 chr10 130442577 130442923 -15146365 + L1M4 LINE L1 2554 2938 -3208 201 250 58 0 chr10 130443385 130443437 -15145851 + L2 LINE L2 3163 3217 -96 486 230 36 14 chr10 130443482 130443621 -15145667 + L1ME4a LINE L1 5979 6120 -1 407 233 175 48 chr10 130443812 130444040 -15145248 - MLT1L LTR MaLR -179 436 180 271 254 42 14 chr10 130444148 130444219 -15145069 - MLT1K LTR MaLR -437 151 79 1155 126 12 0 chr10 130444429 130444596 -15144692 + AluSx SINE Alu 1 169 -143 1496 127 5 5 chr10 130444596 130444817 -15144471 - pTR5 LTR ERV1 -2046 392 172 269 260 0 0 chr10 130444837 130444914 -15144374 - LTR30 LTR ERV1 -98 624 548 6501 123 88 65 chr10 130444916 130446173 -15143115 - pTR5 LTR ERV1 -411 2027 743 952 117 0 0 chr10 130446173 130446310 -15142978 + AluSx SINE Alu 166 302 -10 1717 157 46 0 chr10 130446548 130446828 -15142460 - AluJb SINE Alu -19 293 1 920 317 157 26 chr10 130447693 130447757 -15141531 - L2 LINE L2 0 3313 3259 1935 131 10 0 chr10 130447757 130448055 -15141233 + AluJb SINE Alu 1 301 -11 920 317 157 26 chr10 130448055 130448756 -15140532 - L2 LINE L2 -54 3259 2456 380 332 98 34 chr10 130448823 130449088 -15140200 - L2 LINE L2 -2232 1082 801 470 299 28 7 chr10 130449452 130449596 -15139692 + LTR67 LTR ERVL 411 557 0 1560 238 117 18 chr10 130449667 130450121 -15139167 + Zaphod DNA AcHobo 23 521 -3510 875 164 36 12 chr10 130450124 130450289 -15138999 + Zaphod DNA AcHobo 2722 2890 -1141 3753 172 80 29 chr10 130450351 130450642 -15138646 + Zaphod DNA AcHobo 3054 3329 -702 2543 52 0 0 chr10 130450642 130450947 -15138341 + AluY SINE Alu 1 305 -6 3753 172 80 29 chr10 130450947 130451586 -15137702 + Zaphod DNA AcHobo 3329 4031 0 485 258 112 71 chr10 130451588 130451725 -15137563 - L2 LINE L2 -2568 746 616 1996 125 3 3 chr10 130451725 130452020 -15137268 + AluSx SINE Alu 1 295 -17 485 258 112 71 chr10 130452020 130452293 -15136995 - L2 LINE L2 -2698 616 319 2340 88 0 0 chr10 130452314 130452622 -15136666 + AluSq SINE Alu 2 309 -4 1108 228 98 25 chr10 130453084 130453492 -15135796 + Tigger8 DNA MER2_type 125 562 -104 4584 94 63 13 chr10 130453848 130454564 -15134724 - Tigger3(Golem) DNA MER2_type 0 3029 2278 658 213 0 8 chr10 130454541 130454663 -15134625 - Tigger3(Golem) DNA MER2_type -2907 122 2 * 3279 102 46 83 chr10 130454775 130454974 -15134314 + LTR10A LTR ERV1 1 206 -403 2317 74 0 0 chr10 130454974 130455271 -15134017 - AluY SINE Alu -14 297 1 3279 102 46 83 chr10 130455271 130455639 -15133649 + LTR10A LTR ERV1 206 547 -62 519 217 178 13 chr10 130455653 130455805 -15133483 - MIR SINE MIR -28 234 58 5067 145 41 9 chr10 130456264 130457139 -15132149 + MER4D LTR ERV1 1 903 0 902 301 75 17 chr10 130457284 130457797 -15131491 + MLT1L LTR MaLR 11 608 -4 359 283 10 30 chr10 130458169 130458268 -15131020 + MIR SINE MIR 20 116 -92 2192 99 0 7 chr10 130458280 130458583 -15130705 - AluSq SINE Alu -12 301 1 346 153 83 0 chr10 130458651 130458723 -15130565 - L1ME2 LINE L1 -201 5963 5886 2010 112 7 20 chr10 130459142 130459438 -15129850 - AluSx SINE Alu -20 292 1 2158 106 0 25 chr10 130459468 130459789 -15129499 - AluSq SINE Alu 0 313 1 2202 97 0 13 chr10 130460161 130460297 -15128991 + AluSq SINE Alu 1 137 -176 2141 115 3 0 chr10 130460297 130460602 -15128686 + AluSp SINE Alu 2 307 -6 2202 97 0 13 chr10 130460602 130460774 -15128514 + AluSq SINE Alu 137 305 -8 2223 87 10 3 chr10 130460774 130461074 -15128214 + AluSc SINE Alu 1 302 -7 3183 175 19 10 chr10 130461074 130461669 -15127619 - L1MB5 LINE L1 -9 6165 5566 391 303 146 11 chr10 130461802 130461987 -15127301 + MLT1J2 LTR MaLR 241 450 0 227 211 56 28 chr10 130462121 130462192 -15127096 - MLT1K LTR MaLR -5 583 511 2257 152 46 46 chr10 130462536 130462834 -15126454 - LOR1b LTR ERV1 0 461 161 2246 85 0 7 chr10 130462834 130463129 -15126159 - AluSx SINE Alu -19 293 1 2257 152 46 46 chr10 130463129 130463291 -15125997 - LOR1b LTR ERV1 -299 162 1 457 271 19 0 chr10 130463603 130463710 -15125578 + MIR SINE MIR 45 153 -109 334 241 28 37 chr10 130463743 130463851 -15125437 + MIR SINE MIR 136 242 -20 252 355 57 0 chr10 130463927 130464051 -15125237 - MER5A DNA MER1_type 0 189 59 256 285 291 7 chr10 130464320 130464471 -15124817 + L2 LINE L2 3120 3313 0 212 200 22 0 chr10 130465624 130465669 -15123619 + CT-rich Low_complexity Low_complexity 3 48 0 925 264 96 28 chr10 130465684 130466006 -15123282 + MLT1J LTR MaLR 156 499 -12 399 257 74 20 chr10 130466049 130466197 -15123091 + MER113 DNA MER1_type? 361 516 -5 267 367 31 16 chr10 130466201 130466329 -15122959 + MIR SINE MIR 25 154 -108 2057 115 0 0 chr10 130466357 130466643 -15122645 + AluSx SINE Alu 3 288 -24 323 300 100 9 chr10 130466648 130466758 -15122530 - L2 LINE L2 -12 3260 3141 507 252 111 23 chr10 130467597 130467784 -15121504 + MIR SINE MIR 17 216 -46 363 209 15 0 chr10 130467818 130467885 -15121403 - L2 LINE L2 -1 3312 3245 269 239 70 22 chr10 130467965 130468063 -15121225 - MLT1H LTR MaLR 0 549 449 3695 171 25 91 chr10 130468179 130469685 -15119603 + pTR5 LTR ERV1 743 2606 0 1505 197 57 52 chr10 130469958 130470343 -15118945 - MLT1B LTR MaLR 0 390 4 903 233 113 39 chr10 130470458 130470793 -15118495 - Charlie7 DNA MER1_type -1903 709 350 1547 161 0 54 chr10 130470794 130471111 -15118177 + AluJo SINE Alu 1 300 -12 502 133 0 0 chr10 130471349 130471424 -15117864 - U3 snRNA snRNA -142 75 1 1917 110 10 48 chr10 130471686 130471996 -15117292 + AluSx SINE Alu 1 298 -14 1352 215 154 15 chr10 130472150 130472545 -15116743 - MLT1D LTR MaLR -3 502 53 1722 174 17 0 chr10 130473047 130473346 -15115942 + AluJb SINE Alu 1 304 -8 9134 159 26 17 chr10 130473487 130474819 -15114469 + L1PB2 LINE L1 3057 4375 -1776 189 0 0 0 chr10 130474819 130474840 -15114448 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 9134 159 26 17 chr10 130474840 130476378 -15112910 + L1PB2 LINE L1 4375 5960 -191 1841 50 166 4 chr10 130476378 130476637 -15112651 + AluY SINE Alu 1 301 0 9134 159 26 17 chr10 130476637 130476831 -15112457 + L1PB2 LINE L1 5960 6151 0 731 154 14 154 chr10 130476889 130477008 -15112280 + MER53 DNA DNA 1 77 -112 2261 65 0 33 chr10 130477008 130477314 -15111974 + AluY SINE Alu 1 296 -15 731 154 14 154 chr10 130477314 130477414 -15111874 + MER53 DNA DNA 77 189 0 204 125 36 18 chr10 130477423 130477479 -15111809 + CT-rich Low_complexity Low_complexity 2 58 0 1368 177 182 5 chr10 130478018 130478406 -15110882 + MER89 LTR ERV1 1 559 0 22 0 0 0 chr10 130478666 130478688 -15110600 + AT_rich Low_complexity Low_complexity 1 22 0 2279 93 3 3 chr10 130478722 130479035 -15110253 - AluSq SINE Alu 0 313 1 400 247 83 85 chr10 130479076 130479497 -15109791 + MLT1H LTR MaLR 1 551 -16 2007 121 13 3 chr10 130479575 130479880 -15109408 - AluSx SINE Alu -4 308 1 580 290 115 45 chr10 130479898 130480167 -15109121 + MLT1L LTR MaLR 3 290 -325 509 267 81 19 chr10 130480209 130480370 -15108918 + MLT1L LTR MaLR 358 528 -87 5021 52 21 0 chr10 130480597 130481209 -15108079 + SVA Other Other 758 1382 -4 7471 75 4 3 chr10 130481240 130483020 -15106268 + L1PA7 LINE L1 4375 6154 0 265 323 45 19 chr10 130483577 130483732 -15105556 + L2 LINE L2 2905 3063 -209 538 274 84 33 chr10 130483753 130483968 -15105320 + MIR SINE MIR 34 259 -3 243 0 0 0 chr10 130484102 130484129 -15105159 + (T)n Simple_repeat Simple_repeat 1 27 0 252 281 0 0 chr10 130484129 130484193 -15105095 - MER5A DNA MER1_type -118 71 8 1860 147 0 10 chr10 130484627 130484920 -15104368 - AluSq SINE Alu -23 290 1 246 380 25 0 chr10 130485672 130485751 -15103537 - L2 LINE L2 -49 3223 3143 474 299 174 18 chr10 130486068 130486235 -15103053 + MER91A DNA MER1_type 4 196 0 1174 278 62 29 chr10 130486263 130486680 -15102608 - Tigger8 DNA MER2_type -179 487 57 2030 124 3 0 chr10 130486692 130486983 -15102305 + AluSg SINE Alu 1 292 -18 2173 90 0 0 chr10 130487465 130487753 -15101535 - AluSc SINE Alu -17 292 5 874 140 0 7 chr10 130488348 130488484 -15100804 - AluJo SINE Alu -177 135 1 2188 110 0 0 chr10 130488885 130489193 -15100095 - AluSx SINE Alu -4 308 1 297 333 14 52 chr10 130489307 130489517 -15099771 + L1MC4a LINE L1 5721 5922 -1886 241 239 257 22 chr10 130490024 130490246 -15099042 - L2 LINE L2 -19 3294 3021 1935 96 71 4 chr10 130491012 130491292 -15097996 + AluSx SINE Alu 1 299 -13 513 260 192 27 chr10 130491640 130491704 -15097584 + MIR SINE MIR 8 60 -202 2222 92 20 0 chr10 130491704 130492008 -15097280 + AluSx SINE Alu 2 311 -1 513 260 192 27 chr10 130492008 130492103 -15097185 + MIR SINE MIR 60 138 -124 2595 147 61 26 chr10 130492103 130492542 -15096746 + L1MB8 LINE L1 5655 6116 -62 1648 129 56 28 chr10 130492542 130492828 -15096460 - AluJo SINE Alu -18 294 1 2595 147 61 26 chr10 130492828 130492893 -15096395 + L1MB8 LINE L1 6116 6177 -1 513 260 192 27 chr10 130492893 130492951 -15096337 + MIR SINE MIR 138 262 0 1825 164 36 19 chr10 130492989 130493348 -15095940 + MLT1A1 LTR MaLR 1 365 0 327 277 39 46 chr10 130495475 130495605 -15093683 + MIR SINE MIR 16 144 -118 239 229 135 52 chr10 130496931 130497027 -15092261 + MIR SINE MIR 82 185 -77 1325 123 5 19 chr10 130497027 130497238 -15092050 + AluSg/x SINE Alu 95 302 -8 202 296 0 0 chr10 130497463 130497517 -15091771 - L2 LINE L2 -12 3260 3207 1900 127 27 3 chr10 130498426 130498725 -15090563 + AluSx SINE Alu 2 307 -5 1808 96 92 4 chr10 130498731 130499003 -15090285 + AluSg SINE Alu 1 296 -14 504 295 288 7 chr10 130499157 130499574 -15089714 + L2 LINE L2 2371 2904 -410 339 200 0 14 chr10 130499673 130499743 -15089545 + AluS SINE Alu 1 69 -234 2806 84 33 18 chr10 130499895 130500289 -15088999 - MLT2A1 LTR ERVL -44 400 1 2615 145 26 12 chr10 130500934 130501355 -15087933 + MSTB1 LTR MaLR 6 432 0 370 239 9 26 chr10 130502062 130502175 -15087113 - LTR67 LTR ERVL -8 549 439 560 258 41 22 chr10 130502442 130502600 -15086688 - MIR SINE MIR -36 172 7 752 148 23 8 chr10 130503537 130503665 -15085623 - MER20 DNA MER1_type 0 219 90 981 183 68 120 chr10 130504403 130504745 -15084543 + MLT1A2 LTR MaLR 33 457 -10 451 293 108 0 chr10 130504980 130505147 -15084141 + L2 LINE L2 3107 3291 -22 2062 159 37 6 chr10 130505151 130505503 -15083785 - MLT1A1 LTR MaLR -2 363 1 1937 144 30 0 chr10 130505565 130505864 -15083424 - AluSx SINE Alu -4 308 1 1192 198 45 95 chr10 130506574 130506952 -15082336 + MLT1B LTR MaLR 1 359 -31 1768 166 7 7 chr10 130507170 130507471 -15081817 + AluJb SINE Alu 1 301 -11 183 382 0 0 chr10 130508476 130508565 -15080723 - MIR SINE MIR -55 207 119 8063 85 8 9 chr10 130508908 130509980 -15079308 - MER11C LTR ERVK 0 1071 1 188 184 26 0 chr10 130510487 130510525 -15078763 + MIR SINE MIR 106 144 -64 208 206 0 0 chr10 130510762 130510796 -15078492 + C-rich Low_complexity Low_complexity 1 34 0 263 206 16 16 chr10 130511376 130511439 -15077849 + MIR SINE MIR 80 142 -120 338 184 252 10 chr10 130511833 130511936 -15077352 + MER5A DNA MER1_type 56 183 -6 219 331 53 45 chr10 130511954 130512087 -15077201 - MER5B DNA MER1_type -22 156 23 189 311 14 40 chr10 130512571 130512587 -15076701 + MER5A DNA MER1_type 2 15 -174 293 217 17 0 chr10 130512587 130512647 -15076641 - MER5A DNA MER1_type -3 186 126 186 103 0 0 chr10 130512990 130513019 -15076269 + (CAG)n Simple_repeat Simple_repeat 2 30 0 7770 201 20 12 chr10 130513479 130515238 -15074050 - L1 LINE L1 -1087 5775 4003 * 33190 98 17 55 chr10 130515226 130521629 -15067659 - L1PA7 LINE L1 0 6154 12 518 196 31 1 chr10 130521685 130521836 -15067452 - L1 LINE L1 -2843 4019 3864 192 329 68 14 chr10 130521856 130521929 -15067359 + MER5A DNA MER1_type 63 139 -50 15214 185 73 12 chr10 130521951 130523689 -15065599 - L1PB1 LINE L1 0 6867 5237 261 0 0 0 chr10 130523689 130523718 -15065570 + (TTG)n Simple_repeat Simple_repeat 2 30 0 15214 185 73 12 chr10 130523718 130528461 -15060827 - L1PB1 LINE L1 -1630 5237 7 13567 111 103 15 chr10 130528476 130529176 -15060112 - L1PBa LINE L1 -2979 3883 3246 2088 114 11 0 chr10 130529176 130529490 -15059798 + AluY SINE Alu 1 317 0 13567 111 103 15 chr10 130529490 130531780 -15057508 - L1PBa LINE L1 -3616 3246 634 908 129 0 0 chr10 130531781 130531920 -15057368 - L1PBa LINE L1 -6724 139 1 1069 276 53 17 chr10 130531943 130532298 -15056990 + L1MC4a LINE L1 5475 5842 -1966 257 309 149 0 chr10 130532839 130532933 -15056355 + MIR SINE MIR 31 138 -70 188 291 105 0 chr10 130533772 130533858 -15055430 + MIR SINE MIR 28 122 -140 449 261 42 0 chr10 130534076 130534218 -15055070 - L1MC/D LINE L1 -2297 5511 5364 715 213 117 11 chr10 130534331 130534519 -15054769 + MER3 DNA MER1_type 2 209 0 2137 123 7 7 chr10 130534538 130534839 -15054449 + AluSq SINE Alu 1 301 -12 2321 100 0 3 chr10 130534843 130535153 -15054135 + AluSg SINE Alu 1 309 -1 2715 113 32 23 chr10 130536303 130536351 -15052937 - MER65A LTR ERV1 0 445 399 2344 90 7 0 chr10 130536351 130536651 -15052637 + AluSp SINE Alu 1 302 -11 2715 113 32 23 chr10 130536651 130537043 -15052245 - MER65A LTR ERV1 -46 399 1 263 213 0 16 chr10 130537140 130537201 -15052087 + MER5A DNA MER1_type 62 121 -68 399 233 118 3 chr10 130537613 130537737 -15051551 + MIR SINE MIR 50 182 -68 473 312 77 9 chr10 130538232 130538467 -15050821 + MIR SINE MIR 4 250 -12 678 50 0 0 chr10 130539091 130539171 -15050117 + MLT2A2 LTR ERVL 71 150 -303 2011 165 52 32 chr10 130539928 130540476 -15048812 - MLT2A2 LTR ERVL 0 554 1 21 0 0 0 chr10 130541126 130541147 -15048141 + AT_rich Low_complexity Low_complexity 1 21 0 1796 143 102 18 chr10 130541318 130541653 -15047635 + THE1B LTR MaLR 1 363 -1 229 276 79 0 chr10 130542181 130542257 -15047031 + MIR SINE MIR 166 247 -15 240 214 79 0 chr10 130542369 130542461 -15046827 - MIR SINE MIR -67 141 31 529 159 179 35 chr10 130542630 130542775 -15046513 + MER105 DNA DNA 37 202 -2 1463 226 82 33 chr10 130543022 130543552 -15045736 - MLT1E LTR MaLR 0 593 1 313 200 14 14 chr10 130544227 130544297 -15044991 + MLT1L LTR MaLR 120 189 -426 578 301 59 5 chr10 130544413 130544616 -15044672 + MLT1L LTR MaLR 350 563 -52 1678 204 271 34 chr10 130544868 130545735 -15043553 + Charlie7 DNA MER1_type 1469 2550 -62 306 0 0 0 chr10 130545735 130545769 -15043519 + (CA)n Simple_repeat Simple_repeat 2 35 0 1678 204 271 34 chr10 130545769 130545784 -15043504 + Charlie7 DNA MER1_type 2550 2560 -52 1016 262 136 36 chr10 130546472 130547113 -15042175 - L1ME3A LINE L1 -208 5962 5258 472 235 157 39 chr10 130547260 130547541 -15041747 - L1ME3A LINE L1 -1376 4770 4457 248 338 0 0 chr10 130547605 130547685 -15041603 - L1ME3A LINE L1 -2316 3830 3751 306 293 16 47 chr10 130547731 130547922 -15041366 - L1ME3A LINE L1 -3487 2659 2475 1407 162 25 58 chr10 130547949 130548099 -15041189 - AluJo SINE Alu -32 280 127 1701 167 10 51 chr10 130548099 130548411 -15040877 - AluSx SINE Alu -13 299 1 2150 130 7 0 chr10 130548415 130548714 -15040574 - AluSq SINE Alu -12 301 1 1407 162 25 58 chr10 130548714 130548836 -15040452 - AluJo SINE Alu -188 124 12 2334 107 0 16 chr10 130552303 130552620 -15036668 + AluSx SINE Alu 1 312 0 223 158 171 0 chr10 130555648 130555730 -15033558 - MIR SINE MIR -49 213 118 367 265 301 31 chr10 130555854 130556616 -15032672 + L2 LINE L2 1963 2929 -385 389 190 203 51 chr10 130556625 130556783 -15032505 + L2 LINE L2 3124 3305 -8 2746 23 16 7 chr10 130558846 130559155 -15030133 + AluYb8 SINE Alu 1 312 -6 197 338 26 0 chr10 130559505 130559582 -15029706 - L3 LINE CR1 -11 1566 1488 2165 118 0 17 chr10 130559587 130559884 -15029404 + AluSx SINE Alu 1 292 -20 2701 55 0 0 chr10 130560409 130560720 -15028568 + AluY SINE Alu 1 311 0 202 286 0 29 chr10 130561963 130562033 -15027255 + MER5A DNA MER1_type 100 167 -22 405 134 60 0 chr10 130562744 130562811 -15026477 - AluY SINE Alu -6 296 226 1429 69 0 6 chr10 130562814 130562988 -15026300 - AluY SINE Alu -138 173 1 270 152 13 76 chr10 130563148 130563227 -15026061 - MIR SINE MIR -18 244 171 1360 72 95 54 chr10 130565049 130565189 -15024099 + MER30 DNA MER1_type 1 155 -75 2033 114 3 10 chr10 130565189 130565478 -15023810 + AluSg SINE Alu 6 292 -18 1360 72 95 54 chr10 130565478 130565558 -15023730 + MER30 DNA MER1_type 155 230 0 267 308 154 45 chr10 130565992 130566213 -15023075 - MIR SINE MIR -16 246 2 277 313 12 0 chr10 130566296 130566379 -15022909 - MIR SINE MIR -84 124 41 419 264 48 77 chr10 130566927 130566966 -15022322 + MLT1G1 LTR MaLR 9 48 -542 2475 70 10 0 chr10 130566966 130567267 -15022021 - AluSx SINE Alu -8 304 1 419 264 48 77 chr10 130567267 130567435 -15021853 + MLT1G1 LTR MaLR 48 210 -380 690 237 171 9 chr10 130567447 130567658 -15021630 + MLT1G1 LTR MaLR 351 595 0 419 241 45 9 chr10 130567796 130567908 -15021380 + MIR SINE MIR 74 189 -73 2468 44 0 17 chr10 130568473 130568771 -15020517 - AluY SINE Alu -18 293 1 2481 86 0 0 chr10 130569638 130569941 -15019347 + AluY SINE Alu 1 303 -8 686 262 103 16 chr10 130571124 130571176 -15018112 + MLT1L LTR MaLR 336 382 -233 1691 111 228 37 chr10 130571176 130571554 -15017734 + LTR7 LTR ERV1 1 450 0 686 262 103 16 chr10 130571554 130571753 -15017535 + MLT1L LTR MaLR 382 609 -6 2372 107 0 0 chr10 130571774 130572083 -15017205 - AluSq SINE Alu -3 310 2 496 220 138 0 chr10 130572184 130572293 -15016995 - FLAM_A SINE Alu -9 124 1 23 0 0 0 chr10 130572321 130572344 -15016944 + AT_rich Low_complexity Low_complexity 1 23 0 567 265 146 42 chr10 130572415 130573110 -15016178 - L1ME4a LINE L1 -226 5895 5285 364 83 0 0 chr10 130573251 130573299 -15015989 + Alu SINE Alu 248 295 -5 531 184 138 0 chr10 130573324 130573433 -15015855 + FLAM_C SINE Alu 14 137 -6 230 295 104 27 chr10 130573433 130573616 -15015672 - L1ME4a LINE L1 -1224 4922 4726 2087 148 30 3 chr10 130573616 130573946 -15015342 + LTR28 LTR ERV1 1 339 -681 2591 74 0 0 chr10 130574912 130575223 -15014065 + AluY SINE Alu 1 311 0 5757 153 42 184 chr10 130575387 130577592 -15011696 - MER52A LTR ERV1 0 1755 1 1241 225 86 16 chr10 130577614 130577929 -15011359 + MER58B DNA MER1_type 1 337 -4 242 211 35 35 chr10 130578034 130578091 -15011197 + MIR SINE MIR 121 177 -85 23 0 0 0 chr10 130578419 130578442 -15010846 + AT_rich Low_complexity Low_complexity 1 23 0 2105 117 7 0 chr10 130578491 130578818 -15010470 - AluSx SINE Alu 0 329 1 248 326 49 42 chr10 130578832 130578976 -15010312 - L2 LINE L2 -9 3263 3119 599 261 43 19 chr10 130579257 130579418 -15009870 - MER5B DNA MER1_type -3 175 11 698 122 86 36 chr10 130579458 130579597 -15009691 + MER5A DNA MER1_type 1 146 -43 317 123 18 18 chr10 130579597 130579654 -15009634 - THE1C LTR MaLR 0 375 319 30 27 0 0 chr10 130579721 130579758 -15009530 + AT_rich Low_complexity Low_complexity 1 37 0 2932 94 7 7 chr10 130579772 130580176 -15009112 - L1PA10 LINE L1 -1 6167 5764 1722 147 43 21 chr10 130580178 130580505 -15008783 - THE1C LTR MaLR -41 334 1 397 280 134 38 chr10 130580622 130580861 -15008427 - MIR SINE MIR 0 262 1 282 230 161 0 chr10 130581829 130581916 -15007372 - MER5A DNA MER1_type -80 109 9 189 231 0 0 chr10 130582057 130582096 -15007192 + MIR SINE MIR 99 137 -71 1927 191 175 30 chr10 130582304 130582960 -15006328 + L1MEc LINE L1 519 1269 -5127 286 193 193 0 chr10 130582982 130583039 -15006249 - MER5A DNA MER1_type -84 105 38 1022 186 30 65 chr10 130583055 130583134 -15006154 + MER58A DNA MER1_type 2 82 -2338 2442 113 120 5 chr10 130583134 130583516 -15005772 - MSTA LTR MaLR 0 428 3 1022 186 30 65 chr10 130583516 130583536 -15005752 + MER58A DNA MER1_type 82 101 -2319 2457 101 0 0 chr10 130583536 130583843 -15005445 - AluSx SINE Alu -5 307 1 1022 186 30 65 chr10 130583843 130583973 -15005315 + MER58A DNA MER1_type 101 224 0 313 296 195 26 chr10 130584002 130584228 -15005060 - L2 LINE L2 -94 3219 2956 1535 201 33 36 chr10 130584255 130584619 -15004669 - MLT1A1 LTR MaLR -2 363 1 312 345 83 43 chr10 130584642 130584967 -15004321 - L2 LINE L2 -440 2874 2537 353 153 14 69 chr10 130585171 130585210 -15004078 + MER81 DNA DNA 1 36 -78 4171 157 20 68 chr10 130585210 130586043 -15003245 + MER54B LTR ERVL 1 793 0 353 153 14 69 chr10 130586043 130586075 -15003213 + MER81 DNA DNA 36 68 -46 904 284 116 38 chr10 130587030 130587428 -15001860 + MLT1J LTR MaLR 5 433 -78 182 325 50 0 chr10 130588027 130588107 -15001181 - MIR3 SINE MIR -32 176 93 393 331 12 24 chr10 130588347 130588516 -15000772 - L1M4 LINE L1 -1001 5145 4979 854 143 0 0 chr10 130588554 130588673 -15000615 + AluSg/x SINE Alu 132 250 -62 267 294 98 0 chr10 130588801 130588903 -15000385 + MIR SINE MIR 77 188 -74 334 182 65 0 chr10 130588903 130588980 -15000308 + MIR SINE MIR 105 186 -76 412 261 103 32 chr10 130588984 130589171 -15000117 - MLT1F LTR MaLR -40 527 303 1505 163 28 100 chr10 130589171 130589532 -14999756 + LTR32 LTR ERVL 15 349 -122 734 196 20 7 chr10 130589590 130589743 -14999545 + LTR32 LTR ERVL 317 471 0 350 280 91 0 chr10 130589753 130589896 -14999392 - L2 LINE L2 -215 3098 2943 281 224 45 0 chr10 130591404 130591471 -14997817 - MER96 DNA MER1_type? 0 175 106 673 274 66 9 chr10 130591532 130591764 -14997524 - MIR SINE MIR -5 257 15 477 253 59 41 chr10 130592497 130592667 -14996621 - MIR SINE MIR -50 212 40 199 225 25 0 chr10 130593018 130593058 -14996230 + MIR SINE MIR 34 74 -188 1829 133 61 64 chr10 130593064 130593455 -14995833 - MLT1B LTR MaLR 0 390 1 2488 90 32 24 chr10 130593495 130593905 -14995383 + L1PB2 LINE L1 5643 6055 -96 2141 115 0 7 chr10 130593941 130594228 -14995060 + AluSq SINE Alu 21 305 -8 889 51 34 0 chr10 130594249 130594367 -14994921 + L1PB1 LINE L1 6026 6147 -4 2565 155 7 2 chr10 130594383 130594809 -14994479 + LTR32 LTR ERVL 44 471 0 511 250 98 18 chr10 130594812 130594976 -14994312 + MIR SINE MIR 85 261 -1 204 125 0 0 chr10 130594979 130595011 -14994277 + (CACCAT)n Simple_repeat Simple_repeat 4 35 0 336 246 91 0 chr10 130595106 130595223 -14994065 - MIR3 SINE MIR -6 202 75 283 158 35 0 chr10 130595850 130595907 -14993381 + MLT1L LTR MaLR 194 252 -363 445 185 108 13 chr10 130596050 130596180 -14993108 + MLT1L LTR MaLR 368 611 -4 801 204 192 88 chr10 130596417 130596575 -14992713 - L1ME2 LINE L1 -2 6162 6022 2315 96 0 17 chr10 130596575 130596876 -14992412 - AluSc SINE Alu -13 296 1 801 204 192 88 chr10 130596876 130597075 -14992213 - L1ME2 LINE L1 -142 6022 5752 2187 132 0 0 chr10 130597075 130597379 -14991909 - AluSx SINE Alu -8 304 1 801 204 192 88 chr10 130597379 130597442 -14991846 - L1ME2 LINE L1 -412 5752 5697 1024 194 0 0 chr10 130597443 130597613 -14991675 - FRAM SINE Alu -10 166 1 2303 86 3 30 chr10 130599114 130599417 -14989871 - AluSp SINE Alu -14 299 5 2308 108 0 0 chr10 130599421 130599718 -14989570 - AluSx SINE Alu -15 297 1 488 178 114 41 chr10 130599754 130599941 -14989347 + MER58 DNA MER1_type 5 2417 -3 691 211 94 17 chr10 130602474 130602654 -14986634 + MLT1G1 LTR MaLR 1 194 -401 396 155 0 0 chr10 130602660 130602731 -14986557 + GA-rich Low_complexity Low_complexity 1 71 0 254 211 0 39 chr10 130602833 130602885 -14986403 + MIR3 SINE MIR 144 193 -15 4256 79 3 5 chr10 130603609 130604180 -14985108 - L1PA13 LINE L1 0 6163 5594 1836 167 0 7 chr10 130604900 130605188 -14984100 - AluJo SINE Alu -26 286 1 22 35 0 0 chr10 130605192 130605221 -14984067 + AT_rich Low_complexity Low_complexity 1 29 0 419 254 141 14 chr10 130605303 130605445 -14983843 + MIR SINE MIR 41 200 -62 1161 117 17 39 chr10 130605447 130605626 -14983662 - AluSg/x SINE Alu -7 305 131 338 218 28 70 chr10 130605697 130605839 -14983449 - L1ME2 LINE L1 -452 5669 5534 322 214 0 0 chr10 130606352 130606408 -14982880 + L2 LINE L2 3209 3264 -49 2083 107 7 11 chr10 130607507 130607831 -14981457 - AluSg SINE Alu 0 323 1 22 0 0 0 chr10 130608441 130608463 -14980825 + AT_rich Low_complexity Low_complexity 1 22 0 552 281 15 50 chr10 130609517 130609716 -14979572 + L3 LINE CR1 1296 1487 -90 1519 151 58 40 chr10 130609770 130610048 -14979240 + AluJo SINE Alu 1 283 -29 2379 117 58 23 chr10 130610048 130610476 -14978812 - LTR7 LTR ERV1 -7 443 1 2525 107 46 12 chr10 130610476 130610889 -14978399 - HERVH LTR ERV1 0 7713 7287 13534 178 69 61 chr10 130610916 130612268 -14977020 - HERVH LTR ERV1 -2566 5147 3807 191 225 84 42 chr10 130612268 130612339 -14976949 - L2 LINE L2 -653 2661 2588 13534 178 69 61 chr10 130612339 130612924 -14976364 - HERVH LTR ERV1 -3906 3807 3228 3861 99 0 4 chr10 130612924 130613437 -14975851 - MER9 LTR ERVK 0 511 1 13534 178 69 61 chr10 130613437 130613965 -14975323 - HERVH LTR ERV1 -4485 3228 2706 10539 41 16 102 chr10 130613965 130615477 -14973811 - SVA Other Other -1 1385 3 13534 178 69 61 chr10 130615477 130616736 -14972552 - HERVH LTR ERV1 -5007 2706 1321 836 266 107 52 chr10 130616766 130617091 -14972197 + LTR16C LTR ERVL 8 367 -124 2507 103 43 6 chr10 130617091 130617442 -14971846 + THE1B LTR MaLR 1 364 0 836 266 107 52 chr10 130617442 130617575 -14971713 + LTR16C LTR ERVL 367 491 0 3396 139 13 49 chr10 130617835 130618382 -14970906 + MER1A DNA MER1_type 1 527 0 263 87 43 0 chr10 130618402 130618448 -14970840 + T-rich Low_complexity Low_complexity 3 50 0 314 171 16 54 chr10 130618477 130618606 -14970682 + CT-rich Low_complexity Low_complexity 3 126 0 1774 161 0 25 chr10 130618607 130618887 -14970401 - AluJo SINE Alu -39 273 1 310 267 119 51 chr10 130620121 130620243 -14969045 - L1ME LINE L1 -304 5817 5705 1811 176 0 36 chr10 130620243 130620550 -14968738 + AluJb SINE Alu 1 296 -16 310 267 119 51 chr10 130620550 130620663 -14968625 - L1ME LINE L1 -416 5705 5566 645 315 60 9 chr10 130620906 130621122 -14968166 - MIR SINE MIR -30 232 6 559 311 50 40 chr10 130621479 130621701 -14967587 - L2 LINE L2 -188 3084 2861 257 279 93 12 chr10 130622007 130622093 -14967195 - L2 LINE L2 -9 3263 3171 274 222 48 16 chr10 130623012 130623075 -14966213 + L2 LINE L2 3201 3265 -7 1680 182 3 21 chr10 130623727 130624018 -14965270 + AluJo SINE Alu 18 303 -9 2211 124 0 0 chr10 130624087 130624386 -14964902 + AluSx SINE Alu 6 304 -8 710 273 37 0 chr10 130624409 130624596 -14964692 + MLT1J LTR MaLR 3 196 -315 2900 176 104 48 chr10 130624615 130625099 -14964189 - L1ME2 LINE L1 0 6975 6427 2414 79 0 38 chr10 130625099 130625417 -14963871 - AluSp SINE Alu -7 306 1 2900 176 104 48 chr10 130625417 130625731 -14963557 - L1ME2 LINE L1 -548 6427 6132 353 266 19 44 chr10 130625751 130625768 -14963520 - L1MA10 LINE L1 -1 6333 6317 3233 222 39 27 chr10 130625768 130626619 -14962669 - L1ME1 LINE L1 -6 6160 5310 11266 158 24 4 chr10 130626619 130629587 -14959701 - L1MA4 LINE L1 -3 6297 3279 7411 242 77 30 chr10 130629582 130630678 -14958610 - L1ME2 LINE L1 -842 6115 5072 * 2051 126 0 24 chr10 130630678 130631085 -14958203 - AluSq SINE Alu 0 400 1 7411 242 77 30 chr10 130631085 130633300 -14955988 - L1ME2 LINE L1 -1885 5072 2619 471 242 45 49 chr10 130633286 130633564 -14955724 - L1ME2 LINE L1 -5188 1759 1364 * 1218 277 101 57 chr10 130633895 130634477 -14954811 + MLT2F LTR ERVL 1 608 -55 237 252 47 28 chr10 130634623 130634730 -14954558 - L1ME2 LINE L1 -6215 224 116 559 283 107 17 chr10 130634804 130635094 -14954194 + MLT1J LTR MaLR 194 509 -2 341 286 137 6 chr10 130635899 130636060 -14953228 - MIR3 SINE MIR -11 197 16 743 144 16 123 chr10 130636413 130636600 -14952688 + MER20 DNA MER1_type 31 197 -22 528 223 166 0 chr10 130636801 130636952 -14952336 - MER5A DNA MER1_type -6 183 4 233 282 153 0 chr10 130637458 130637582 -14951706 + MIR SINE MIR 95 237 -25 657 152 88 24 chr10 130637616 130637741 -14951547 + AluJo SINE Alu 1 133 -169 1215 158 0 0 chr10 130638378 130638562 -14950726 + AluJo SINE Alu 129 312 0 2590 216 22 22 chr10 130638572 130639123 -14950165 - MER74B LTR ERVL -13 609 59 361 343 15 15 chr10 130639895 130640093 -14949195 - MLT1L LTR MaLR 0 615 418 360 0 0 0 chr10 130640265 130640305 -14948983 + (TG)n Simple_repeat Simple_repeat 1 40 0 1444 226 7 0 chr10 130640305 130640584 -14948704 - AluJb SINE Alu -31 281 1 2405 80 0 3 chr10 130640646 130640948 -14948340 - AluY SINE Alu -10 301 1 426 265 99 25 chr10 130641200 130641362 -14947926 + MIR SINE MIR 34 207 -55 1264 213 7 3 chr10 130641597 130641879 -14947409 - L1MC4 LINE L1 -664 7378 7096 426 257 21 21 chr10 130641857 130641997 -14947291 - HAL1b LINE L1 -986 362 223 * 24 67 0 0 chr10 130642025 130642070 -14947218 + AT_rich Low_complexity Low_complexity 1 45 0 1938 172 46 41 chr10 130642153 130642589 -14946699 - MLT2D LTR ERVL 0 520 1 182 211 39 0 chr10 130642772 130642824 -14946464 + CT-rich Low_complexity Low_complexity 1 54 0 386 48 0 167 chr10 130643369 130643453 -14945835 + MER41A LTR ERV1 403 472 -82 562 280 22 43 chr10 130643465 130643650 -14945638 + MIR3 SINE MIR 42 221 -6 489 246 98 70 chr10 130644474 130644759 -14944529 - L1ME4a LINE L1 -193 5928 5636 1617 107 18 214 chr10 130644842 130645281 -14944007 - Tigger1 DNA MER2_type -1 2417 2065 7880 77 10 1 chr10 130645281 130646317 -14942971 - L1PA6 LINE L1 -1712 4434 3390 7105 71 7 13 chr10 130646317 130648035 -14941253 + L1PA6 LINE L1 4443 6154 0 14177 117 14 1 chr10 130648035 130650076 -14939212 - Tigger1 DNA MER2_type -350 2068 2 432 271 198 35 chr10 130650095 130650402 -14938886 - MLT1H LTR MaLR -70 479 73 2397 84 7 13 chr10 130650402 130650712 -14938576 + AluSq SINE Alu 1 308 -5 432 271 198 35 chr10 130650712 130650788 -14938500 - MLT1H LTR MaLR -476 73 11 480 266 9 0 chr10 130651179 130651292 -14937996 - MER81 DNA DNA 0 114 1 1068 216 58 0 chr10 130651297 130651505 -14937783 - MER58A DNA MER1_type -1 223 4 627 229 106 0 chr10 130651633 130651812 -14937476 + MIR SINE MIR 64 261 -1 256 300 0 0 chr10 130651889 130651969 -14937319 - MIR3 SINE MIR 0 208 129 2597 133 33 12 chr10 130652069 130652489 -14936799 - MSTB1 LTR MaLR -3 429 1 4214 177 35 10 chr10 130654319 130654343 -14934945 - L1MB7 LINE L1 -16 6168 6146 2527 95 13 26 chr10 130654343 130654723 -14934565 + THE1C LTR MaLR 1 375 0 4214 177 35 10 chr10 130654723 130655518 -14933770 - L1MB7 LINE L1 -38 6146 5328 325 341 73 11 chr10 130655546 130655725 -14933563 + MIR SINE MIR 73 262 0 1464 193 19 70 chr10 130656637 130656784 -14932504 + MLT1A1 LTR MaLR 12 165 -200 2296 78 0 3 chr10 130656784 130657067 -14932221 + AluSx SINE Alu 21 302 -10 1464 193 19 70 chr10 130657067 130657154 -14932134 + MLT1A1 LTR MaLR 165 255 -110 2632 46 0 3 chr10 130657154 130657457 -14931831 + AluY SINE Alu 1 302 -9 1464 193 19 70 chr10 130657457 130657594 -14931694 + MLT1A1 LTR MaLR 255 365 0 2161 122 0 7 chr10 130657963 130658266 -14931022 + AluSx SINE Alu 1 301 -11 200 246 130 0 chr10 130659223 130659292 -14929996 + MER5A DNA MER1_type 112 189 0 183 161 0 0 chr10 130659952 130659983 -14929305 - MIR SINE MIR -34 228 198 414 237 26 0 chr10 130660026 130660140 -14929148 - L1MC5 LINE L1 -36 7925 7809 5654 132 31 15 chr10 130660199 130661152 -14928136 - L1MA7 LINE L1 0 6291 5323 2193 62 91 0 chr10 130661153 130661429 -14927859 - AluY SINE Alu -10 301 1 2776 201 17 112 chr10 130661451 130662280 -14927008 - L1MC5 LINE L1 -172 7789 7080 1823 140 9 37 chr10 130662280 130662601 -14926687 - AluJb SINE Alu 0 312 1 2776 201 17 112 chr10 130662601 130662828 -14926460 - L1MC5 LINE L1 -881 7080 6833 458 222 21 48 chr10 130662812 130663001 -14926287 - L1MC5 LINE L1 -436 7525 7342 * 560 249 69 35 chr10 130663030 130663240 -14926048 - L1MC5 LINE L1 -1017 6797 6579 2335 91 7 0 chr10 130663240 130663548 -14925740 + AluSq SINE Alu 1 310 -3 560 249 69 35 chr10 130663548 130663632 -14925656 - L1MC5 LINE L1 -1235 6579 6499 1429 146 0 29 chr10 130663706 130663945 -14925343 + MER46A DNA MER2_type 5 236 0 216 326 22 22 chr10 130663949 130664041 -14925247 - MIR SINE MIR -145 117 26 197 296 278 9 chr10 130664491 130664599 -14924689 + MIR3 SINE MIR 9 145 -63 262 260 0 78 chr10 130665250 130665327 -14923961 - L2 LINE L2 -9 3304 3234 209 186 0 23 chr10 130665349 130665392 -14923896 + GA-rich Low_complexity Low_complexity 3 44 0 255 220 0 0 chr10 130665457 130665507 -14923781 - L2 LINE L2 -5 3267 3218 280 261 52 26 chr10 130666847 130666962 -14922326 + MIR3 SINE MIR 6 123 -85 1517 223 113 19 chr10 130667177 130667639 -14921649 + MLT1D LTR MaLR 1 505 0 714 294 127 56 chr10 130668650 130669747 -14919541 + L2 LINE L2 1685 2859 -455 2186 127 0 3 chr10 130669825 130670125 -14919163 - AluSx SINE Alu -13 299 1 1755 177 37 0 chr10 130670824 130671004 -14918284 - AluJo SINE Alu -1 311 114 216 0 0 0 chr10 130671004 130671028 -14918260 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1755 177 37 0 chr10 130671028 130671147 -14918141 - AluJo SINE Alu -198 114 1 2567 132 52 2 chr10 130671737 130672139 -14917149 - MSTA LTR MaLR 0 428 7 306 209 23 35 chr10 130672430 130672516 -14916772 - MIR SINE MIR -88 174 90 200 94 0 0 chr10 130672868 130672900 -14916388 - MIR3 SINE MIR -23 185 154 988 286 80 65 chr10 130673172 130673498 -14915790 + MLT1K LTR MaLR 5 345 -243 2294 118 0 3 chr10 130673498 130673811 -14915477 - AluSq SINE Alu -1 312 1 988 286 80 65 chr10 130673811 130674058 -14915230 + MLT1K LTR MaLR 345 587 -1 943 275 22 58 chr10 130674091 130674451 -14914837 + MLT1H LTR MaLR 8 354 -195 1170 156 0 0 chr10 130674488 130674668 -14914620 - FRAM SINE Alu 0 176 1 264 88 53 0 chr10 130674674 130674731 -14914557 + (TA)n Simple_repeat Simple_repeat 1 60 0 818 149 0 0 chr10 130674731 130674852 -14914436 - FLAM_C SINE Alu -12 121 1 2296 118 0 0 chr10 130674861 130675166 -14914122 - AluSx SINE Alu -7 305 1 301 265 71 0 chr10 130675236 130675334 -14913954 + L2 LINE L2 3137 3241 -31 316 277 0 77 chr10 130676261 130676315 -14912973 - MIR3 SINE MIR -3 205 148 1558 160 42 49 chr10 130676315 130676621 -14912667 + AluJb SINE Alu 3 306 -6 316 277 0 77 chr10 130676621 130676696 -14912592 - MIR3 SINE MIR -60 148 86 264 30 0 0 chr10 130676742 130676775 -14912513 + (TC)n Simple_repeat Simple_repeat 1 33 0 973 154 0 0 chr10 130676780 130676923 -14912365 - AluJo/FRAM SINE Alu -36 276 134 1959 154 0 16 chr10 130676923 130677229 -14912059 - AluJb SINE Alu -11 301 1 2425 87 3 0 chr10 130677370 130677679 -14911609 - AluSx SINE Alu -2 310 1 2599 146 40 0 chr10 130677744 130678149 -14911139 + MSTB LTR MaLR 2 422 -4 1194 270 22 6 chr10 130679710 130680029 -14909259 + L1MEc LINE L1 79 402 -5994 1005 207 21 70 chr10 130680025 130680138 -14909150 + L1M4 LINE L1 2841 2958 -3188 * 2189 113 0 0 chr10 130680138 130680440 -14908848 + AluSx SINE Alu 1 302 -10 1005 207 21 70 chr10 130680440 130680655 -14908633 + L1M4 LINE L1 2958 3153 -2993 * 1567 209 42 35 chr10 130680643 130681073 -14908215 + L1M4 LINE L1 3509 3941 -2205 334 152 0 38 chr10 130681192 130681261 -14908027 + AluJb SINE Alu 173 221 -81 1891 134 3 0 chr10 130681337 130681645 -14907643 - AluSq SINE Alu 0 309 1 494 316 41 0 chr10 130682359 130682530 -14906758 - MIR SINE MIR -9 253 76 379 167 30 0 chr10 130682856 130682922 -14906366 + MER81 DNA DNA 43 110 -4 180 294 103 15 chr10 130683589 130683657 -14905631 - L2 LINE L2 -11 3261 3188 1026 167 18 70 chr10 130683680 130683907 -14905381 - MER20 DNA MER1_type -4 215 1 491 231 255 5 chr10 130684009 130684221 -14905067 - MER102b DNA MER1_type -4 337 73 597 261 17 28 chr10 130684406 130684586 -14904702 + MER5B DNA MER1_type 1 178 0 291 260 55 0 chr10 130684675 130684748 -14904540 + MIR SINE MIR 102 178 -84 215 271 129 0 chr10 130684784 130684814 -14904474 + MER5B DNA MER1_type 97 122 -56 216 0 0 0 chr10 130684814 130684838 -14904450 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 215 271 129 0 chr10 130684838 130684877 -14904411 + MER5B DNA MER1_type 122 175 -3 429 174 10 10 chr10 130685881 130685979 -14903309 + L1MC3 LINE L1 6914 7011 -774 8005 197 64 35 chr10 130685979 130686832 -14902456 + L1MD1 LINE L1 16 843 -5697 2204 94 0 0 chr10 130686832 130687120 -14902168 + AluSc SINE Alu 1 288 -21 8005 197 64 35 chr10 130687120 130687143 -14902145 + L1MD1 LINE L1 843 864 -5676 1761 154 17 20 chr10 130687143 130687441 -14901847 + AluJo SINE Alu 1 297 -15 8005 197 64 35 chr10 130687441 130687576 -14901712 + L1MD1 LINE L1 864 994 -5546 597 100 50 0 chr10 130687576 130687676 -14901612 + L1MA9 LINE L1 6203 6307 -5 8005 197 64 35 chr10 130687676 130689310 -14899978 + L1MD1 LINE L1 994 2898 -3642 791 172 0 0 chr10 130689311 130689433 -14899855 + FLAM_C SINE Alu 1 122 -11 9310 205 54 21 chr10 130690685 130691125 -14898163 + L1MD1 LINE L1 2914 3338 -3298 900 145 0 0 chr10 130691125 130691256 -14898032 + FLAM_C SINE Alu 1 131 -2 9310 205 54 21 chr10 130691256 130692163 -14897125 + L1MD1 LINE L1 3338 4214 -2422 216 0 0 0 chr10 130692163 130692187 -14897101 + (CAAT)n Simple_repeat Simple_repeat 2 25 0 9310 205 54 21 chr10 130692187 130694455 -14894833 + L1MD1 LINE L1 4214 6636 0 2014 94 28 0 chr10 130695093 130695379 -14893909 + AluSg SINE Alu 1 294 -16 23 0 0 0 chr10 130695530 130695553 -14893735 + AT_rich Low_complexity Low_complexity 1 23 0 4343 191 16 4 chr10 130695555 130696464 -14892824 + L1MB8 LINE L1 4503 5421 -744 904 96 0 0 chr10 130696464 130696615 -14892673 + AluY SINE Alu 166 311 0 3585 164 22 50 chr10 130696615 130697372 -14891916 + L1MB8 LINE L1 5420 6155 -23 1727 164 18 0 chr10 130697383 130697664 -14891624 - AluJb SINE Alu -26 286 1 38 39 0 0 chr10 130697672 130697724 -14891564 + AT_rich Low_complexity Low_complexity 1 52 0 353 226 43 0 chr10 130697741 130697834 -14891454 + L1MC3 LINE L1 6992 7088 -697 304 237 4 46 chr10 130697834 130697925 -14891363 + MLT1F1 LTR MaLR 35 143 -406 3319 160 20 3 chr10 130697926 130698519 -14890769 + L1MC3 LINE L1 7183 7785 0 1406 185 131 27 chr10 130698587 130698916 -14890372 - MLT1A1 LTR MaLR 0 365 3 327 65 0 0 chr10 130699469 130699515 -14889773 + (TTGG)n Simple_repeat Simple_repeat 2 47 0 2051 119 0 0 chr10 130699515 130699801 -14889487 - AluSx SINE Alu -25 287 2 425 291 89 70 chr10 130699857 130700116 -14889172 + L1ME4a LINE L1 5561 5831 -290 1941 99 7 7 chr10 130700116 130700427 -14888861 + AluY SINE Alu 1 311 0 425 291 89 70 chr10 130700427 130700524 -14888764 + L1ME4a LINE L1 5831 5925 -196 488 217 78 48 chr10 130700710 130700876 -14888412 + MLT1J LTR MaLR 1 171 -340 2182 112 0 0 chr10 130700912 130701207 -14888081 + AluSx SINE Alu 1 295 -17 400 219 73 73 chr10 130701798 130701835 -14887453 - MER103 DNA DNA -1 165 129 2297 90 6 3 chr10 130701835 130702147 -14887141 + AluSp SINE Alu 1 313 0 400 219 73 73 chr10 130702147 130702273 -14887015 - MER103 DNA DNA -36 130 2 467 299 85 9 chr10 130702654 130702865 -14886423 - MIR SINE MIR -15 247 21 354 205 189 0 chr10 130703157 130703278 -14886010 - Charlie8 DNA MER1_type -2181 236 93 346 221 154 0 chr10 130703278 130703382 -14885906 + MLT1C LTR MaLR 1 120 -347 * 971 173 26 117 chr10 130703370 130703636 -14885652 + MLT1C LTR MaLR 224 465 -2 345 310 128 55 chr10 130703790 130703962 -14885326 + L2 LINE L2 2221 2379 -935 455 216 124 52 chr10 130703962 130704156 -14885132 - MER63A DNA MER1_type 0 210 3 345 310 128 55 chr10 130704156 130704383 -14884905 + L2 LINE L2 2379 2649 -665 591 291 122 8 chr10 130704477 130704724 -14884564 - MLT1K LTR MaLR -5 583 309 767 232 195 55 chr10 130704764 130704924 -14884364 + MLT1H LTR MaLR 35 171 -378 2489 58 0 0 chr10 130704924 130705233 -14884055 + AluY SINE Alu 1 309 -2 767 232 195 55 chr10 130705233 130705524 -14883764 + MLT1H LTR MaLR 171 549 0 1836 89 36 0 chr10 130705709 130705957 -14883331 + AluSq SINE Alu 1 257 -56 571 268 95 45 chr10 130706536 130706752 -14882536 - MIR SINE MIR 0 262 31 2326 90 7 0 chr10 130706752 130707062 -14882226 - AluSx SINE Alu 0 312 1 571 268 95 45 chr10 130707062 130707088 -14882200 - MIR SINE MIR -231 31 8 216 0 0 0 chr10 130707787 130707811 -14881477 + (A)n Simple_repeat Simple_repeat 1 24 0 635 185 147 6 chr10 130708074 130708231 -14881057 - MER53 DNA DNA -4 185 7 446 318 56 28 chr10 130709408 130709587 -14879701 + MIR SINE MIR 16 199 -63 295 173 200 27 chr10 130709890 130709965 -14879323 - MIR SINE MIR -64 198 111 408 255 50 65 chr10 130710715 130710877 -14878411 - MIR SINE MIR -62 146 11 2516 161 40 83 chr10 130711736 130711939 -14877349 + L1MD3 LINE L1 7384 7594 -401 2249 78 24 0 chr10 130711939 130712235 -14877053 + AluSc SINE Alu 1 303 -6 2516 161 40 83 chr10 130712235 130712365 -14876923 + L1MD3 LINE L1 7594 7728 -267 636 186 152 7 chr10 130712365 130712510 -14876778 + FRAM SINE Alu 1 166 0 2516 161 40 83 chr10 130712510 130712804 -14876484 + L1MD3 LINE L1 7728 7985 -10 1304 257 68 53 chr10 130713042 130713568 -14875720 + MLT1K LTR MaLR 34 567 -21 523 238 134 90 chr10 130713709 130713986 -14875302 - LTR16C LTR ERVL -28 463 175 2005 197 42 20 chr10 130714733 130715190 -14874098 + MLT1C LTR MaLR 1 467 0 2269 172 33 26 chr10 130715362 130715719 -14873569 + MSTA LTR MaLR 2 364 -64 2023 130 0 0 chr10 130715719 130716019 -14873269 + AluSx SINE Alu 1 300 -12 2269 172 33 26 chr10 130716019 130716085 -14873203 + MSTA LTR MaLR 364 428 0 394 149 68 0 chr10 130716106 130716180 -14873108 + MER103 DNA DNA 44 122 -44 397 281 31 8 chr10 130716763 130716891 -14872397 - MIR SINE MIR -24 238 108 262 274 34 124 chr10 130716999 130717233 -14872055 - L2 LINE L2 -81 3191 2979 658 255 57 33 chr10 130717417 130717629 -14871659 + MIR SINE MIR 25 241 -21 221 267 0 0 chr10 130717926 130717971 -14871317 + (CA)n Simple_repeat Simple_repeat 2 46 0 665 245 135 4 chr10 130719255 130719500 -14869788 + L1ME1 LINE L1 5885 6161 -5 241 270 99 9 chr10 130719522 130719633 -14869655 - L2 LINE L2 -421 2893 2773 1799 164 136 38 chr10 130719647 130719755 -14869533 - MLT1C LTR MaLR -6 461 365 3896 88 20 7 chr10 130719755 130720302 -14868986 + MER41A LTR ERV1 1 554 0 1799 164 136 38 chr10 130720302 130720613 -14868675 - MLT1C LTR MaLR -102 365 1 237 328 49 8 chr10 130720654 130720776 -14868512 + MIR SINE MIR 20 146 -62 1382 173 109 69 chr10 130721003 130721426 -14867862 - LTR7 LTR ERV1 -10 440 1 216 273 50 106 chr10 130721436 130721597 -14867691 - L2 LINE L2 -110 3162 3011 2165 184 43 25 chr10 130721653 130721982 -14867306 + MLT1D LTR MaLR 2 344 -161 2832 96 0 3 chr10 130721982 130722347 -14866941 + THE1B LTR MaLR 1 364 0 2165 184 43 25 chr10 130722347 130722507 -14866781 + MLT1D LTR MaLR 344 500 -5 733 272 135 24 chr10 130724065 130724481 -14864807 + LTR33 LTR ERVL 48 509 -12 449 245 10 0 chr10 130725191 130725293 -14863995 - LTR16C LTR ERVL -1 490 388 278 261 98 61 chr10 130725323 130725568 -14863720 - LTR16C LTR ERVL -159 332 79 207 282 107 91 chr10 130726421 130726821 -14862467 - L2 LINE L2 -5 3267 2804 2134 95 10 0 chr10 130727164 130727460 -14861828 + AluSx SINE Alu 1 299 -13 454 302 95 5 chr10 130727537 130727726 -14861562 - L2 LINE L2 0 3313 3108 437 224 103 9 chr10 130727736 130727843 -14861445 + MER58 DNA MER1_type 1 117 -98 861 70 26 0 chr10 130727843 130727957 -14861331 + FLAM_C SINE Alu 1 117 -26 226 180 20 20 chr10 130727992 130728042 -14861246 + GA-rich Low_complexity Low_complexity 1 50 0 890 121 21 0 chr10 130728859 130728999 -14860289 + L1PA8 LINE L1 6027 6169 -3 1559 259 136 4 chr10 130729307 130729828 -14859460 + HAL1 LINE L1 122 711 -1796 789 161 21 120 chr10 130730096 130730288 -14859000 - MER5B DNA MER1_type -5 173 1 2171 238 130 49 chr10 130730293 130731329 -14857959 + HAL1 LINE L1 752 1871 -636 487 280 66 39 chr10 130731329 130731700 -14857588 + LTR67 LTR ERVL 105 555 -2 589 236 107 21 chr10 130731716 130731949 -14857339 + HAL1 LINE L1 1985 2237 -270 2189 78 17 30 chr10 130731991 130732287 -14857001 + AluY SINE Alu 1 292 -19 1992 233 75 31 chr10 130732292 130732864 -14856424 - MLT1E2 LTR MaLR -26 600 4 415 223 142 69 chr10 130732867 130733114 -14856174 + HAL1 LINE L1 2224 2488 -19 187 250 0 36 chr10 130733679 130733724 -14855564 + MER5B DNA MER1_type 1 45 -133 3084 72 30 0 chr10 130733724 130734127 -14855161 + L1PA10 LINE L1 5750 6164 -4 192 26 53 26 chr10 130734184 130734222 -14855066 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 285 125 0 94 chr10 130734238 130734302 -14854986 - MER5B DNA MER1_type -66 112 55 23 33 0 0 chr10 130734356 130734386 -14854902 + AT_rich Low_complexity Low_complexity 1 30 0 1313 161 0 19 chr10 130734919 130735130 -14854158 - AluJb SINE Alu -8 304 98 536 196 6 34 chr10 130735170 130735326 -14853962 - MIR SINE MIR -65 143 27 367 271 31 23 chr10 130736678 130736807 -14852481 + MIR SINE MIR 22 151 -111 1073 179 47 24 chr10 130737190 130737402 -14851886 - MER20 DNA MER1_type 0 219 3 582 234 36 29 chr10 130738185 130738322 -14850966 + MIR SINE MIR 94 231 -31 2284 122 0 3 chr10 130738807 130739118 -14850170 + AluSg SINE Alu 1 310 0 242 274 0 0 chr10 130740120 130740171 -14849117 - MIR SINE MIR -59 149 99 912 181 2 10 chr10 130740193 130740371 -14848917 + MLT1B LTR MaLR 1 176 -212 1811 130 84 3 chr10 130740373 130740658 -14848630 + AluSx SINE Alu 1 308 -4 11978 128 33 68 chr10 130740658 130741312 -14847976 + L1M4c LINE L1 14 689 -5695 2446 72 0 0 chr10 130741312 130741603 -14847685 + AluY SINE Alu 13 303 -8 11978 128 33 68 chr10 130741603 130742064 -14847224 + L1M4c LINE L1 689 1165 -5219 2373 84 7 0 chr10 130742064 130742361 -14846927 + AluY SINE Alu 1 299 -12 11978 128 33 68 chr10 130742361 130742730 -14846558 + L1M4c LINE L1 1165 1545 -4839 2024 167 0 0 chr10 130742730 130743042 -14846246 + AluJo SINE Alu 1 312 0 11978 128 33 68 chr10 130743042 130743243 -14846045 + L1M4c LINE L1 1545 1752 -4632 1791 146 59 0 chr10 130743243 130743564 -14845724 + L1MA5 LINE L1 5961 6300 0 11978 128 33 68 chr10 130743564 130744186 -14845102 + L1M4c LINE L1 1752 2236 -4148 2061 137 10 22 chr10 130744186 130744500 -14844788 + AluJo SINE Alu 1 310 -2 11978 128 33 68 chr10 130744500 130744637 -14844651 + L1M4c LINE L1 2236 2376 -4008 707 256 15 22 chr10 130744638 130744912 -14844376 + L1 LINE L1 3416 3687 -2695 1651 179 4 18 chr10 130744917 130745196 -14844092 + AluSx SINE Alu 1 275 -37 376 172 23 0 chr10 130745198 130745285 -14844003 + GA-rich Low_complexity Low_complexity 1 89 0 6827 170 18 48 chr10 130745288 130745824 -14843464 + L1 LINE L1 3714 4265 -2117 2133 133 13 0 chr10 130745824 130746125 -14843163 + AluSx SINE Alu 1 305 -7 6827 170 18 48 chr10 130746125 130746625 -14842663 + L1 LINE L1 4265 4779 -1603 2094 142 0 22 chr10 130746625 130746936 -14842352 + AluJb SINE Alu 1 304 -8 6827 170 18 48 chr10 130746936 130747314 -14841974 + L1 LINE L1 4779 5076 -1306 2147 136 0 0 chr10 130747314 130747609 -14841679 - AluSq SINE Alu -18 295 1 6827 170 18 48 chr10 130747609 130747818 -14841470 + L1 LINE L1 5076 5290 -1092 798 198 15 30 chr10 130747825 130747950 -14841338 + L1MB3 LINE L1 5983 6105 -78 425 147 13 0 chr10 130747950 130748025 -14841263 + MADE1 DNA Mariner 5 80 0 798 198 15 30 chr10 130748025 130748096 -14841192 + L1MB3 LINE L1 6105 6176 -7 1110 135 0 11 chr10 130748146 130748324 -14840964 + MLT1B LTR MaLR 215 390 0 2462 218 16 30 chr10 130748645 130749210 -14840078 + MER68 LTR ERV1 1 557 -5 4784 90 20 6 chr10 130749221 130749876 -14839412 - MER4A LTR ERV1 0 664 1 366 303 35 28 chr10 130749988 130750133 -14839155 - MER5A DNA MER1_type -23 166 21 249 33 0 0 chr10 130750367 130750397 -14838891 + (CA)n Simple_repeat Simple_repeat 2 31 0 197 114 86 0 chr10 130750467 130750502 -14838786 + MIR3 SINE MIR 166 203 -5 201 194 48 65 chr10 130750891 130750953 -14838335 + L2 LINE L2 3024 3084 -188 861 249 15 0 chr10 130751175 130751376 -14837912 + MLT1K LTR MaLR 137 340 -248 717 259 35 35 chr10 130751574 130751856 -14837432 + MLT1K LTR MaLR 296 577 -11 288 333 30 0 chr10 130751920 130752019 -14837269 - MIR SINE MIR -83 125 24 239 318 105 46 chr10 130752491 130752960 -14836328 - L1M2 LINE L1 -3318 3530 3019 2299 106 0 7 chr10 130752960 130753261 -14836027 - AluSg1 SINE Alu -10 299 1 239 318 105 46 chr10 130753261 130753373 -14835915 - L1M2 LINE L1 -3829 3019 2915 905 170 14 0 chr10 130753438 130753585 -14835703 - FRAM SINE Alu -15 161 13 461 306 59 14 chr10 130753592 130753799 -14835489 - L1M2 LINE L1 -3937 2911 2694 491 277 77 85 chr10 130754121 130754592 -14834696 - L1MEd LINE L1 -745 1745 1272 2300 101 3 3 chr10 130754592 130754888 -14834400 + AluSx SINE Alu 2 297 -15 491 277 77 85 chr10 130754888 130755383 -14833905 - L1MEd LINE L1 -1218 1272 676 931 310 73 38 chr10 130755558 130756123 -14833165 + ERVL LTR ERVL 1137 1753 -3940 262 286 11 11 chr10 130756147 130756238 -14833050 - MLT1G1 LTR MaLR -501 94 4 538 243 174 0 chr10 130756241 130756385 -14832903 + ERVL LTR ERVL 1844 2012 -3752 808 245 83 123 chr10 130756432 130757035 -14832253 - MLT1G1 LTR MaLR -13 582 4 335 327 19 0 chr10 130757075 130757179 -14832109 + ERVL LTR ERVL 1858 1963 -3033 661 264 27 18 chr10 130757182 130757471 -14831817 + ERVL LTR ERVL 4156 4457 -1028 2324 99 3 0 chr10 130757821 130758113 -14831175 + AluSg SINE Alu 1 293 -17 459 0 0 0 chr10 130758504 130758555 -14830733 + (TG)n Simple_repeat Simple_repeat 2 52 0 1941 118 79 0 chr10 130758573 130758853 -14830435 - AluSx SINE Alu -10 302 1 613 279 55 16 chr10 130759156 130759548 -14829740 - MLT1K LTR MaLR -8 580 140 2515 86 0 0 chr10 130760223 130760524 -14828764 + AluSx SINE Alu 1 301 -11 277 237 108 0 chr10 130760544 130760637 -14828651 - L1ME4a LINE L1 -81 6040 5938 239 278 19 0 chr10 130760782 130760836 -14828452 - MIR SINE MIR -59 149 95 563 319 24 5 chr10 130761588 130761795 -14827493 + MIR SINE MIR 16 226 -36 649 174 0 76 chr10 130761811 130761846 -14827442 - FLAM_A SINE Alu -169 133 97 2206 114 0 32 chr10 130761846 130762154 -14827134 + AluSx SINE Alu 1 298 -14 649 174 0 76 chr10 130762154 130762262 -14827026 - FLAM_A SINE Alu -205 97 1 2393 113 3 0 chr10 130762376 130762687 -14826601 - AluSx SINE Alu 0 312 1 211 255 0 0 chr10 130763211 130763258 -14826030 + C-rich Low_complexity Low_complexity 1 47 0 22 0 0 0 chr10 130763260 130763282 -14826006 + GC_rich Low_complexity Low_complexity 1 22 0 238 374 0 0 chr10 130763350 130763457 -14825831 + C-rich Low_complexity Low_complexity 1 107 0 226 210 20 44 chr10 130763482 130763690 -14825598 + C-rich Low_complexity Low_complexity 1 202 0 447 271 0 62 chr10 130763725 130763917 -14825371 + C-rich Low_complexity Low_complexity 1 180 0 778 154 167 65 chr10 130764180 130764426 -14824862 - MLT1D LTR MaLR -234 271 1 247 182 127 0 chr10 130764426 130764481 -14824807 + MIR SINE MIR 78 139 -69 996 192 19 19 chr10 130764481 130764695 -14824593 - MER20 DNA MER1_type 0 219 6 2254 130 0 0 chr10 130764877 130765185 -14824103 + AluSx SINE Alu 1 308 -4 846 164 8 15 chr10 130765262 130765396 -14823892 + FLAM_A SINE Alu 1 133 0 21 0 0 0 chr10 130765454 130765475 -14823813 + AT_rich Low_complexity Low_complexity 1 21 0 2450 78 3 0 chr10 130765510 130765817 -14823471 + AluY SINE Alu 1 308 -3 354 286 54 27 chr10 130765898 130766010 -14823278 + L2 LINE L2 3150 3264 -8 196 176 329 12 chr10 130766101 130766186 -14823102 + MIR SINE MIR 72 183 -79 237 132 0 0 chr10 130766219 130766257 -14823031 + (CA)n Simple_repeat Simple_repeat 2 39 0 241 233 198 0 chr10 130766284 130766400 -14822888 - L1MC/D LINE L1 -1905 5903 5765 250 200 0 0 chr10 130766944 130766999 -14822289 + L2 LINE L2 2919 2973 -299 1075 101 7 0 chr10 130766999 130767138 -14822150 - AluSg/x SINE Alu -19 291 152 281 309 134 72 chr10 130767143 130767405 -14821883 + L2 LINE L2 2994 3271 -1 310 71 0 0 chr10 130767647 130767689 -14821599 + MADE1 DNA Mariner 1 42 -38 381 167 17 125 chr10 130767792 130767881 -14821407 + L1MD3 LINE L1 7679 7776 -199 2160 122 3 31 chr10 130767881 130768202 -14821086 - AluSx SINE Alu 0 312 1 2254 129 0 0 chr10 130768210 130768513 -14820775 - AluSq SINE Alu -10 303 1 381 167 17 125 chr10 130768513 130768534 -14820754 + L1MD3 LINE L1 7783 7975 0 1500 191 19 36 chr10 130768661 130768970 -14820318 - AluJo SINE Alu -8 304 1 846 131 0 8 chr10 130769000 130769122 -14820166 + FLAM_C SINE Alu 1 121 -22 702 128 8 8 chr10 130769222 130769339 -14819949 + FLAM_C SINE Alu 25 141 -2 1645 178 6 49 chr10 130769347 130769673 -14819615 + AluJo SINE Alu 1 312 0 2232 114 0 7 chr10 130769886 130770183 -14819105 + AluSx SINE Alu 1 295 -17 2196 116 36 0 chr10 130770183 130770484 -14818804 + AluSx SINE Alu 1 312 0 2611 161 46 64 chr10 130770731 130771204 -14818084 + MER68 LTR ERV1 1 464 -98 1684 181 14 3 chr10 130771204 130771496 -14817792 + AluJb SINE Alu 1 295 -17 2611 161 46 64 chr10 130771496 130771586 -14817702 + MER68 LTR ERV1 464 554 -8 334 299 75 0 chr10 130771678 130771812 -14817476 - MIR SINE MIR -97 165 22 1133 139 18 0 chr10 130772095 130772261 -14817027 - AluSg/x SINE Alu -10 300 132 2524 69 0 0 chr10 130772261 130772567 -14816721 - AluYa5 SINE Alu -1 310 5 1203 162 0 34 chr10 130772806 130773041 -14816247 + AluSg/x SINE Alu 86 312 0 346 294 59 80 chr10 130773151 130773352 -14815936 + L2 LINE L2 2975 3170 -143 1917 146 10 7 chr10 130773352 130773654 -14815634 - AluJo SINE Alu -9 303 1 346 294 59 80 chr10 130773654 130773741 -14815547 + L2 LINE L2 3170 3257 -56 180 0 0 0 chr10 130773756 130773776 -14815512 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 241 291 38 6 chr10 130774128 130774286 -14815002 + G-rich Low_complexity Low_complexity 3 165 0 26 50 0 0 chr10 130774443 130774483 -14814805 + GC_rich Low_complexity Low_complexity 1 40 0 31 26 0 0 chr10 130774563 130774601 -14814687 + GC_rich Low_complexity Low_complexity 1 38 0 27 29 0 0 chr10 130774727 130774761 -14814527 + GC_rich Low_complexity Low_complexity 1 34 0 189 0 0 0 chr10 130774773 130774794 -14814494 + (CGCGG)n Simple_repeat Simple_repeat 4 24 0 198 342 57 16 chr10 130774904 130775097 -14814191 - MIR SINE MIR -34 228 28 1241 169 23 0 chr10 130775464 130775683 -14813605 - AluJb SINE Alu 0 312 89 983 144 130 74 chr10 130775883 130776098 -14813190 + AluJb SINE Alu 73 299 -13 1758 151 9 91 chr10 130776100 130776431 -14812857 + AluSx SINE Alu 1 304 -8 497 161 0 11 chr10 130776431 130776524 -14812764 - L1P5 LINE L1 -467 5689 5598 1497 197 41 17 chr10 130776529 130776824 -14812464 - AluJo SINE Alu -10 302 1 2056 123 3 20 chr10 130776949 130777242 -14812046 + AluSp SINE Alu 1 288 -25 1788 112 76 0 chr10 130777250 130777501 -14811787 + AluSx SINE Alu 30 299 -13 834 137 0 0 chr10 130777583 130777707 -14811581 - AluSg/x SINE Alu -5 307 184 2426 80 0 13 chr10 130777882 130778018 -14811270 + AluSx SINE Alu 1 137 -175 2317 70 0 26 chr10 130778018 130778320 -14810968 + AluSg SINE Alu 1 294 -16 2426 80 0 13 chr10 130778320 130778495 -14810793 + AluSx SINE Alu 137 308 -4 2076 104 49 0 chr10 130779054 130779341 -14809947 + AluSg SINE Alu 1 301 -9 2300 104 0 0 chr10 130779415 130779713 -14809575 + AluSg SINE Alu 5 302 -8 2133 103 0 80 chr10 130779918 130780257 -14809031 + AluSx SINE Alu 1 312 0 215 264 0 0 chr10 130780829 130780882 -14808406 - L2 LINE L2 0 3272 3220 2046 96 16 7 chr10 130780883 130781186 -14808102 + AluSx SINE Alu 1 306 -6 647 194 13 39 chr10 130781440 130781595 -14807693 - L1MC3 LINE L1 -22 7763 7613 2162 98 3 0 chr10 130781595 130781892 -14807396 - AluSg1 SINE Alu -11 298 1 948 181 0 0 chr10 130781903 130782074 -14807214 - AluSg/x SINE Alu -8 304 134 1992 130 3 0 chr10 130782075 130782406 -14806882 - AluSx SINE Alu 0 312 1 1188 167 118 16 chr10 130782406 130782651 -14806637 - L1MC3 LINE L1 -329 7456 7187 1913 161 0 0 chr10 130782653 130782964 -14806324 - AluJb SINE Alu -1 311 1 1465 160 14 25 chr10 130783264 130783545 -14805743 + AluJb SINE Alu 35 312 0 552 216 154 12 chr10 130783545 130783699 -14805589 - MIR SINE MIR -51 211 32 830 177 0 50 chr10 130783769 130783950 -14805338 + FRAM SINE Alu 4 175 -1 2345 61 0 16 chr10 130783962 130784274 -14805014 + AluSc SINE Alu 1 307 -2 1873 122 10 14 chr10 130784508 130784803 -14804485 + AluSx SINE Alu 1 294 -18 1218 224 107 58 chr10 130784840 130784901 -14804387 - MLT1E3 LTR MaLR 0 624 567 2025 115 0 7 chr10 130784901 130785224 -14804064 + AluSq SINE Alu 1 321 0 1218 224 107 58 chr10 130785224 130785608 -14803680 - MLT1E3 LTR MaLR -57 567 156 180 0 0 0 chr10 130785671 130785691 -14803597 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 1520 179 0 33 chr10 130785691 130785982 -14803306 - AluJb SINE Alu -28 284 2 952 162 6 6 chr10 130786255 130786428 -14802860 - FRAM SINE Alu 0 176 4 1981 130 3 32 chr10 130786438 130786754 -14802534 - AluSx SINE Alu -5 307 1 618 167 191 9 chr10 130786759 130786902 -14802386 - MLT1E1 LTR MaLR -463 161 1 467 271 53 38 chr10 130786916 130787049 -14802239 - L2 LINE L2 0 3272 3138 1935 122 11 0 chr10 130787177 130787490 -14801798 + AluY SINE Alu 1 316 0 817 93 0 0 chr10 130787490 130787598 -14801690 + AluSq SINE Alu 134 241 -72 1623 179 10 0 chr10 130787699 130787990 -14801298 - AluJb SINE Alu -18 294 1 215 235 20 20 chr10 130787999 130788050 -14801238 - L2 LINE L2 -246 3067 3017 190 373 119 0 chr10 130788721 130788855 -14800433 - L2 LINE L2 -12 3260 3111 2026 265 288 20 chr10 130788873 130789080 -14800208 - L2 LINE L2 -1 3312 3162 1985 107 52 0 chr10 130789080 130789371 -14799917 + AluSx SINE Alu 1 306 -6 2026 265 288 20 chr10 130789371 130790067 -14799221 - L2 LINE L2 -151 3162 2654 2418 68 0 0 chr10 130790067 130790378 -14798910 - AluY SINE Alu 0 311 1 2301 82 7 0 chr10 130790386 130790689 -14798599 - AluSg SINE Alu -5 305 1 2105 123 0 0 chr10 130790696 130790988 -14798300 - AluSx SINE Alu -20 292 1 2207 93 3 0 chr10 130790995 130791295 -14797993 - AluSx SINE Alu -9 303 3 2026 265 288 20 chr10 130791295 130792199 -14797089 - L2 LINE L2 -672 2641 839 2016 104 10 7 chr10 130792209 130792506 -14796782 - AluSq SINE Alu -15 298 1 1311 149 0 5 chr10 130792519 130792733 -14796555 - AluSg/x SINE Alu -5 305 93 2125 93 7 7 chr10 130792739 130793028 -14796260 - AluSx SINE Alu -19 293 5 405 171 29 0 chr10 130793045 130793115 -14796173 + MER58 DNA MER1_type 5 76 -139 554 120 0 0 chr10 130793274 130793349 -14795939 - AluS SINE Alu -237 76 2 2152 97 0 7 chr10 130793849 130794149 -14795139 + AluSc SINE Alu 1 298 -11 21 36 0 0 chr10 130794423 130794451 -14794837 + AT_rich Low_complexity Low_complexity 1 28 0 1156 114 12 0 chr10 130794536 130794703 -14794585 - AluSq SINE Alu -15 298 130 1675 165 3 34 chr10 130794704 130795026 -14794262 - AluJo SINE Alu 0 312 1 1157 116 0 0 chr10 130795078 130795242 -14794046 - AluSg/x SINE Alu -5 305 142 2099 116 0 0 chr10 130795374 130795668 -14793620 - AluSg1 SINE Alu -15 294 1 391 188 98 0 chr10 130795780 130795892 -14793396 + L1MA4 LINE L1 6057 6179 -121 1913 109 23 30 chr10 130795895 130796197 -14793091 + AluSx SINE Alu 3 302 -10 775 156 8 0 chr10 130796247 130796369 -14792919 + FLAM_A SINE Alu 4 126 -7 201 191 24 0 chr10 130796574 130796616 -14792672 + (TATATG)n Simple_repeat Simple_repeat 3 45 0 1848 148 0 7 chr10 130797395 130797692 -14791596 - AluJb SINE Alu -1 311 17 2227 97 0 3 chr10 130797756 130798064 -14791224 - AluSx SINE Alu -5 307 1 1631 172 3 46 chr10 130798084 130798410 -14790878 - AluJo SINE Alu 0 312 1 234 0 0 0 chr10 130799178 130799204 -14790084 + (CA)n Simple_repeat Simple_repeat 1 26 0 1744 180 0 0 chr10 130799688 130799983 -14789305 - AluSx SINE Alu -17 295 1 2456 7 0 7 chr10 130800296 130800576 -14788712 - AluYa5 SINE Alu -7 304 27 2138 114 0 0 chr10 130800678 130800977 -14788311 - AluSx SINE Alu -13 299 1 2027 127 0 34 chr10 130801571 130801893 -14787395 - AluSx SINE Alu -1 311 1 1947 108 0 0 chr10 130802025 130802293 -14786995 + AluSx SINE Alu 23 290 -22 2182 84 7 7 chr10 130802599 130802908 -14786380 + AluSg SINE Alu 1 309 -1 1853 167 3 10 chr10 130803586 130803751 -14785537 - AluJb SINE Alu -4 298 134 2187 96 0 22 chr10 130803751 130803924 -14785364 - AluSx SINE Alu -7 305 141 1893 89 55 20 chr10 130803924 130804217 -14785071 - AluSp SINE Alu -10 303 1 2187 96 0 22 chr10 130804217 130804355 -14784933 - AluSx SINE Alu -171 141 1 1853 167 3 10 chr10 130804355 130804489 -14784799 - AluJb SINE Alu -168 134 1 824 115 16 16 chr10 130804507 130804629 -14784659 - FLAM_C SINE Alu -10 123 2 22 0 0 0 chr10 130804633 130804655 -14784633 + AT_rich Low_complexity Low_complexity 1 22 0 2201 122 0 0 chr10 130804880 130805191 -14784097 + AluSx SINE Alu 2 312 0 885 189 97 24 chr10 130805561 130805767 -14783521 - MER58A DNA MER1_type 0 224 4 818 143 0 0 chr10 130805902 130806028 -14783260 - FLAM_C SINE Alu -17 126 1 601 167 68 68 chr10 130806217 130806349 -14782939 - AluJb SINE Alu -179 133 2 2263 85 0 16 chr10 130806359 130806666 -14782622 - AluSc SINE Alu -7 302 1 411 314 75 48 chr10 130806834 130806938 -14782350 + MIR SINE MIR 4 104 -158 1754 164 0 3 chr10 130806938 130807236 -14782052 + AluJo SINE Alu 1 297 -15 411 314 75 48 chr10 130807236 130807383 -14781905 + MIR SINE MIR 104 262 0 2102 106 7 3 chr10 130807899 130808192 -14781096 + AluSq SINE Alu 1 294 -19 209 299 205 8 chr10 130808224 130808341 -14780947 + MIR3 SINE MIR 33 172 -36 1114 92 67 0 chr10 130808519 130808683 -14780605 - AluSp SINE Alu -9 304 130 23 54 0 0 chr10 130808784 130808821 -14780467 + AT_rich Low_complexity Low_complexity 1 37 0 577 219 8 8 chr10 130808824 130808947 -14780341 + AluSp SINE Alu 2 124 -189 1092 193 12 28 chr10 130809073 130809327 -14779961 - AluSx SINE Alu -62 250 1 6380 66 9 52 chr10 130809361 130810359 -14778929 - SVA Other Other 0 1386 432 1325 147 4 4 chr10 130810402 130810634 -14778654 + AluY SINE Alu 74 305 -6 987 188 0 0 chr10 130810637 130810797 -14778491 + AluJo/FRAM SINE Alu 137 296 -6 1739 155 3 16 chr10 130810891 130811195 -14778093 + AluJb SINE Alu 1 300 -12 25 0 0 0 chr10 130812396 130812421 -14776867 + AT_rich Low_complexity Low_complexity 1 25 0 708 124 53 0 chr10 130812478 130812591 -14776697 + AluSq/x SINE Alu 2 120 -192 1677 129 43 22 chr10 130812607 130812744 -14776544 + AluJb SINE Alu 1 134 -181 1813 120 12 74 chr10 130812744 130813070 -14776218 + AluSx SINE Alu 3 308 -4 1677 129 43 22 chr10 130813070 130813241 -14776047 + AluJb SINE Alu 134 315 0 1561 154 77 0 chr10 130813243 130813516 -14775772 + AluSx SINE Alu 1 294 -18 252 319 0 21 chr10 130813906 130814000 -14775288 + L1ME LINE L1 5500 5591 -530 1427 47 0 0 chr10 130814172 130814341 -14774947 + AluY SINE Alu 1 169 -142 658 142 0 19 chr10 130814441 130814547 -14774741 + FRAM SINE Alu 57 160 -16 2207 96 0 0 chr10 130814621 130814922 -14774366 + AluSg1 SINE Alu 1 301 -8 478 281 90 6 chr10 130814995 130815173 -14774115 - L1ME LINE L1 -370 5751 5559 540 214 126 60 chr10 130815206 130815421 -14773867 - L1ME LINE L1 -2325 5483 5255 809 156 8 8 chr10 130815622 130815750 -14773538 - FLAM_C SINE Alu -11 132 5 2368 59 0 0 chr10 130816542 130816829 -14772459 + AluY SINE Alu 1 287 -24 198 0 0 0 chr10 130816846 130816868 -14772420 + (TTA)n Simple_repeat Simple_repeat 1 22 0 981 163 74 16 chr10 130816876 130817066 -14772222 + AluJb SINE Alu 1 201 -111 477 260 30 0 chr10 130817082 130817201 -14772087 - L1MC/D LINE L1 -371 5799 5691 1155 213 108 18 chr10 130817208 130817272 -14772016 - L1ME1 LINE L1 -6 6229 6172 1755 174 7 0 chr10 130817272 130817577 -14771711 + AluJb SINE Alu 1 307 -5 1155 213 108 18 chr10 130817577 130817845 -14771443 - L1ME1 LINE L1 -63 6172 5867 1381 125 27 27 chr10 130817845 130818069 -14771219 + THE1C LTR MaLR 1 224 -151 1800 127 18 7 chr10 130818082 130818366 -14770922 + AluSg SINE Alu 4 290 -20 2136 109 3 0 chr10 130818366 130818659 -14770629 + AluSp SINE Alu 1 295 -18 1239 290 67 37 chr10 130818784 130819178 -14770110 - L1ME1 LINE L1 -559 5672 5292 2169 104 0 0 chr10 130819178 130819476 -14769812 - AluSx SINE Alu -14 298 1 1239 290 67 37 chr10 130819476 130820261 -14769027 - L1ME1 LINE L1 -939 5292 4492 2007 102 39 0 chr10 130820277 130820562 -14768726 + AluSx SINE Alu 1 296 -16 2266 78 0 7 chr10 130820566 130820861 -14768427 + AluSp SINE Alu 2 294 -19 1461 134 149 8 chr10 130821184 130821446 -14767842 + AluJb SINE Alu 1 299 -3 1032 267 125 27 chr10 130821547 130822002 -14767286 - L1ME1 LINE L1 -1756 4459 4050 1767 146 20 13 chr10 130822002 130822303 -14766985 - AluSx SINE Alu -9 303 1 1032 267 125 27 chr10 130822303 130822671 -14766617 - L1ME1 LINE L1 -2165 4050 3518 2126 123 0 0 chr10 130822727 130823027 -14766261 - AluSx SINE Alu -12 300 1 353 229 48 0 chr10 130823062 130823145 -14766143 - L1ME1 LINE L1 -2864 3351 3265 711 132 116 16 chr10 130823148 130823269 -14766019 + FLAM_C SINE Alu 1 133 0 813 279 100 52 chr10 130823383 130823494 -14765794 - L1ME1 LINE L1 -3313 2902 2798 507 217 113 9 chr10 130823494 130823609 -14765679 - FLAM_A SINE Alu -6 127 1 813 279 100 52 chr10 130823609 130824284 -14765004 - L1ME1 LINE L1 -3417 2798 2121 1805 152 0 0 chr10 130824307 130824590 -14764698 + AluJb SINE Alu 23 305 -7 312 238 40 129 chr10 130824679 130824818 -14764470 + L1MC5 LINE L1 7744 7861 -100 2534 49 0 0 chr10 130824818 130825122 -14764166 + AluY SINE Alu 1 304 -7 312 238 40 129 chr10 130825122 130825184 -14764104 + L1MC5 LINE L1 7861 7927 -34 515 27 80 13 chr10 130825344 130825419 -14763869 - MADE1 DNA Mariner 0 80 1 234 0 0 0 chr10 130825526 130825552 -14763736 + (CA)n Simple_repeat Simple_repeat 2 27 0 1222 195 94 98 chr10 130825736 130825868 -14763420 + MLT1D LTR MaLR 2 133 -372 2201 107 0 0 chr10 130825868 130826167 -14763121 + AluSx SINE Alu 1 299 -13 1222 195 94 98 chr10 130826167 130826536 -14762752 + MLT1D LTR MaLR 133 501 -4 370 280 21 0 chr10 130826551 130826644 -14762644 + L2 LINE L2 3117 3211 -61 353 267 53 38 chr10 130826663 130826794 -14762494 - MIR3 SINE MIR -16 192 60 1957 125 7 0 chr10 130826998 130827287 -14762001 + AluSx SINE Alu 1 291 -21 403 142 10 268 chr10 130827492 130827697 -14761591 - MER91B DNA MER1_type -27 163 12 295 260 207 53 chr10 130828051 130828220 -14761068 + MIR SINE MIR 68 262 0 1226 130 84 14 chr10 130828995 130829210 -14760078 + MER30 DNA MER1_type 1 230 0 2169 108 0 0 chr10 130829255 130829552 -14759736 + AluSx SINE Alu 6 302 -10 284 244 62 62 chr10 130829774 130829950 -14759338 - MLT1L LTR MaLR -326 289 114 189 354 69 0 chr10 130830010 130830140 -14759148 - MIR3 SINE MIR -60 148 10 400 254 52 129 chr10 130832016 130832086 -14757202 + MIR3 SINE MIR 31 105 -103 1989 133 17 0 chr10 130832086 130832380 -14756908 + AluSx SINE Alu 1 299 -13 400 254 52 129 chr10 130832380 130832431 -14756857 + MIR3 SINE MIR 105 134 -74 868 135 0 15 chr10 130832431 130832564 -14756724 + FLAM_C SINE Alu 3 133 0 400 254 52 129 chr10 130832564 130832634 -14756654 + MIR3 SINE MIR 134 208 0 950 128 0 0 chr10 130833052 130833185 -14756103 + FLAM_C SINE Alu 1 133 0 236 69 35 52 chr10 130833201 130833234 -14756054 + (GAAA)n Simple_repeat Simple_repeat 3 36 -23 1481 102 5 5 chr10 130833234 130833449 -14755839 + AluSg SINE Alu 1 215 -95 236 69 35 52 chr10 130833449 130833473 -14755815 + (GAAA)n Simple_repeat Simple_repeat 36 59 0 915 36 0 0 chr10 130833473 130833584 -14755704 + (GGAA)n Simple_repeat Simple_repeat 3 113 0 200 261 0 0 chr10 130834205 130834251 -14755037 + C-rich Low_complexity Low_complexity 2 47 0 21 36 0 0 chr10 130834424 130834452 -14754836 + GC_rich Low_complexity Low_complexity 1 28 0 213 193 48 36 chr10 130834500 130834583 -14754705 + (CGGGG)n Simple_repeat Simple_repeat 2 85 0 25 51 0 0 chr10 130834593 130834632 -14754656 + GC_rich Low_complexity Low_complexity 1 39 0 38 66 0 28 chr10 130834654 130834760 -14754528 + GC_rich Low_complexity Low_complexity 1 103 0 24 63 0 16 chr10 130834968 130835011 -14754277 + GC_rich Low_complexity Low_complexity 1 44 -18 216 111 0 0 chr10 130835011 130835047 -14754241 + (CGA)n Simple_repeat Simple_repeat 1 36 0 24 63 0 16 chr10 130835047 130835066 -14754222 + GC_rich Low_complexity Low_complexity 44 62 0 198 103 0 0 chr10 130835202 130835231 -14754057 + (CCG)n Simple_repeat Simple_repeat 2 30 0 30 77 0 0 chr10 130835254 130835319 -14753969 + GC_rich Low_complexity Low_complexity 1 65 0 31 0 0 0 chr10 130835512 130835543 -14753745 + GC_rich Low_complexity Low_complexity 1 31 0 1996 83 31 7 chr10 130837822 130838110 -14751178 + AluSg SINE Alu 1 295 -15 23 0 0 0 chr10 130841177 130841200 -14748088 + AT_rich Low_complexity Low_complexity 1 23 0 22 80 0 0 chr10 130841744 130841794 -14747494 + AT_rich Low_complexity Low_complexity 1 50 0 479 273 128 11 chr10 130842384 130842571 -14746717 - MER3 DNA MER1_type 0 209 1 2303 57 33 3 chr10 130842808 130843108 -14746180 - AluSq SINE Alu -4 309 1 203 227 0 68 chr10 130843171 130843259 -14746029 + (TCTCTG)n Simple_repeat Simple_repeat 3 84 0 21 0 0 0 chr10 130843363 130843384 -14745904 + AT_rich Low_complexity Low_complexity 1 21 0 1844 133 23 19 chr10 130843542 130843851 -14745437 + AluSx SINE Alu 1 310 -2 1619 191 48 39 chr10 130844228 130844289 -14744999 - MER82 DNA MER2_type -270 383 324 1664 162 14 3 chr10 130844289 130844586 -14744702 + AluJb SINE Alu 1 300 -12 1619 191 48 39 chr10 130844586 130844881 -14744407 - MER82 DNA MER2_type -329 324 24 316 355 123 44 chr10 130845010 130845441 -14743847 - L2 LINE L2 -560 2754 2290 2157 97 3 13 chr10 130845490 130845625 -14743663 + AluSx SINE Alu 1 136 -176 2253 89 3 0 chr10 130845625 130845929 -14743359 + AluY SINE Alu 1 305 -6 2157 97 3 13 chr10 130845929 130846092 -14743196 + AluSx SINE Alu 136 296 -16 1739 155 3 16 chr10 130846186 130846490 -14742798 + AluJb SINE Alu 1 300 -12 25 0 0 0 chr10 130847692 130847717 -14741571 + AT_rich Low_complexity Low_complexity 1 25 0 708 124 53 0 chr10 130847774 130847887 -14741401 + AluSq/x SINE Alu 2 120 -193 1677 129 43 22 chr10 130847903 130848040 -14741248 + AluJb SINE Alu 1 134 -181 1813 120 12 74 chr10 130848040 130848366 -14740922 + AluSx SINE Alu 3 308 -4 1677 129 43 22 chr10 130848366 130848537 -14740751 + AluJb SINE Alu 134 315 0 1561 154 77 0 chr10 130848539 130848812 -14740476 + AluSx SINE Alu 1 294 -18 286 321 75 15 chr10 130849203 130849337 -14739951 + L1MC/D LINE L1 5501 5642 -2166 2105 99 7 7 chr10 130849468 130849770 -14739518 + AluY SINE Alu 1 302 -9 1871 167 0 0 chr10 130849834 130850146 -14739142 - AluSx SINE Alu 0 312 1 1164 133 43 38 chr10 130850557 130850768 -14738520 - AluJo SINE Alu -100 212 1 338 283 196 60 chr10 130850824 130851287 -14738001 + HAL1 LINE L1 1136 1661 -846 1876 121 7 0 chr10 130851578 130851850 -14737438 + AluSq SINE Alu 1 274 -39 1975 104 7 7 chr10 130851887 130852167 -14737121 + AluSg SINE Alu 1 280 -30 231 224 255 20 chr10 130853401 130853499 -14735789 + MER5A DNA MER1_type 43 163 -26 * 405 250 10 19 chr10 130853430 130853534 -14735754 - MER5A DNA MER1_type -83 106 4 2008 114 13 3 chr10 130853570 130853868 -14735420 - AluSg SINE Alu -9 301 1 1734 133 3 101 chr10 130854079 130854417 -14734871 + AluSq SINE Alu 1 305 -8 741 156 91 91 chr10 130854496 130854682 -14734606 + AluSg/x SINE Alu 126 311 -1 12187 130 52 83 chr10 130856497 130856695 -14732593 - Tigger1 DNA MER2_type 0 2418 2215 510 194 0 0 chr10 130856695 130856788 -14732500 + FLAM_A SINE Alu 45 137 -5 12187 130 52 83 chr10 130856788 130857259 -14732029 - Tigger1 DNA MER2_type -203 2215 1731 1467 146 59 28 chr10 130857259 130857270 -14732018 - AluJb SINE Alu -15 297 288 279 0 0 0 chr10 130857270 130857301 -14731987 + (TG)n Simple_repeat Simple_repeat 2 32 0 1467 146 59 28 chr10 130857301 130857577 -14731711 - AluJb SINE Alu -24 288 1 12187 130 52 83 chr10 130857577 130858331 -14730957 - Tigger1 DNA MER2_type -687 1731 955 1329 196 16 42 chr10 130858331 130858637 -14730651 + AluJo SINE Alu 1 298 -14 12187 130 52 83 chr10 130858637 130858821 -14730467 - Tigger1 DNA MER2_type -1463 955 767 189 0 0 0 chr10 130858821 130858842 -14730446 + (ATTG)n Simple_repeat Simple_repeat 4 24 0 1833 129 4 0 chr10 130858842 130859122 -14730166 - AluSq SINE Alu -32 281 1 12187 130 52 83 chr10 130859122 130859334 -14729954 - Tigger1 DNA MER2_type -1650 768 551 1900 116 7 45 chr10 130859334 130859644 -14729644 + AluSp SINE Alu 1 298 -15 12187 130 52 83 chr10 130859644 130859829 -14729459 - Tigger1 DNA MER2_type -1867 551 362 1903 125 7 7 chr10 130859829 130860118 -14729170 + AluSx SINE Alu 1 289 -23 12187 130 52 83 chr10 130860118 130860463 -14728825 - Tigger1 DNA MER2_type -2056 362 48 577 167 0 0 chr10 130860502 130860592 -14728696 + AluJ/FLAM SINE Alu 12 101 -211 273 125 0 0 chr10 130860593 130860633 -14728655 - Tigger1 DNA MER2_type -2377 41 2 28 0 0 0 chr10 130860633 130860661 -14728627 + AT_rich Low_complexity Low_complexity 1 28 0 923 193 53 31 chr10 130861146 130861374 -14727914 + L1MB8 LINE L1 5888 6120 -58 261 65 65 43 chr10 130861363 130861409 -14727879 - L1MB8 LINE L1 -17 6161 6115 * 1453 115 14 0 chr10 130862177 130862394 -14726894 + MER46B DNA MER2_type 2 96 -140 2140 103 3 0 chr10 130862400 130862691 -14726597 + AluSq SINE Alu 7 298 -15 1820 134 10 7 chr10 130863509 130863801 -14725487 + AluSx SINE Alu 9 301 -11 449 239 182 45 chr10 130865145 130865409 -14723879 + L1ME LINE L1 5512 5811 -310 22 0 0 0 chr10 130865624 130865646 -14723642 + AT_rich Low_complexity Low_complexity 1 22 0 264 235 86 0 chr10 130866589 130866741 -14722547 + L1ME LINE L1 5689 5884 -286 2117 100 7 26 chr10 130867645 130867955 -14721333 - AluSx SINE Alu -8 304 1 209 277 0 0 chr10 130868620 130868667 -14720621 + L2 LINE L2 3224 3270 -2 1644 162 24 0 chr10 130868705 130868995 -14720293 + AluSx SINE Alu 1 297 -15 185 325 38 38 chr10 130868999 130869079 -14720209 + MER5A DNA MER1_type 73 152 -37 2301 134 55 31 chr10 130869230 130869606 -14719682 + MSTA LTR MaLR 1 389 -39 2066 113 0 7 chr10 130869606 130869907 -14719381 - AluSx SINE Alu -9 303 5 2301 134 55 31 chr10 130869907 130869948 -14719340 + MSTA LTR MaLR 389 428 0 2406 68 0 0 chr10 130870737 130871044 -14718244 + AluY SINE Alu 1 307 -4 2102 103 10 3 chr10 130871129 130871439 -14717849 + AluSx SINE Alu 1 312 0 245 315 87 0 chr10 130871604 130871696 -14717592 + MIR SINE MIR 20 119 -143 1995 117 3 13 chr10 130871833 130872131 -14717157 + AluSq SINE Alu 1 295 -18 1213 209 13 27 chr10 130872207 130872508 -14716780 + AluJo SINE Alu 1 297 -15 2282 92 0 0 chr10 130872717 130873011 -14716277 - AluSx SINE Alu -18 294 1 254 208 50 108 chr10 130873534 130873654 -14715634 - MIR SINE MIR -80 182 70 2045 112 30 3 chr10 130874306 130874609 -14714679 - AluSq SINE Alu -2 311 1 2287 99 0 3 chr10 130874922 130875236 -14714052 - AluSq SINE Alu 0 313 1 1537 224 20 0 chr10 130875812 130876106 -14713182 - MLT1A1 LTR MaLR 0 365 66 1704 199 36 11 chr10 130876673 130877029 -14712259 + MLT1A1 LTR MaLR 1 365 0 859 256 3 63 chr10 130877296 130877426 -14711862 + L1MC1 LINE L1 5488 5624 -497 2196 103 0 7 chr10 130877426 130877736 -14711552 + AluSg SINE Alu 3 310 0 859 256 3 63 chr10 130877736 130877922 -14711366 + L1MC1 LINE L1 5624 5785 -336 * 1629 202 14 31 chr10 130877918 130878099 -14711189 + L1MC4 LINE L1 7444 7627 -415 1868 141 7 3 chr10 130878099 130878398 -14710890 + AluJb SINE Alu 1 300 -12 1629 202 14 31 chr10 130878398 130878631 -14710657 + L1MC4 LINE L1 7627 7851 -191 1965 107 31 7 chr10 130878649 130878939 -14710349 + AluSq SINE Alu 1 297 -16 2085 114 3 0 chr10 130879018 130879308 -14709980 + AluSx SINE Alu 1 291 -21 620 332 84 37 chr10 130879481 130880108 -14709180 - L2 LINE L2 -4 3268 2625 1016 257 142 27 chr10 130880348 130880756 -14708532 - LTR16C LTR ERVL 0 491 37 1684 134 11 28 chr10 130880827 130881110 -14708178 + AluJo SINE Alu 11 288 -24 21 0 0 0 chr10 130881110 130881131 -14708157 + AT_rich Low_complexity Low_complexity 1 21 0 226 281 31 21 chr10 130881162 130881258 -14708030 - L2 LINE L2 -665 2649 2553 1420 238 74 55 chr10 130881312 130881830 -14707458 - MER39 LTR ERV1 0 707 1 345 256 200 20 chr10 130881830 130882025 -14707263 - L2 LINE L2 -844 2470 2241 1727 180 44 19 chr10 130882030 130882379 -14706909 + L1MC1 LINE L1 5962 6322 -11 2187 132 3 0 chr10 130882379 130882682 -14706606 + AluSx SINE Alu 1 304 -8 1727 180 44 19 chr10 130882682 130882694 -14706594 + L1MC1 LINE L1 6322 6332 -1 2438 90 0 3 chr10 130882701 130883001 -14706287 + AluSq SINE Alu 1 299 -14 1764 163 29 23 chr10 130883317 130883623 -14705665 + AluJo SINE Alu 1 308 -4 255 61 0 0 chr10 130884003 130884036 -14705252 + (TTTC)n Simple_repeat Simple_repeat 1 33 0 316 268 79 37 chr10 130884036 130884200 -14705088 - L1MCa LINE L1 -4038 2388 2218 2259 137 0 0 chr10 130884265 130884572 -14704716 - AluSx SINE Alu -5 307 1 305 387 52 21 chr10 130884624 130884818 -14704470 - L2 LINE L2 0 3272 3073 1890 122 0 8 chr10 130885623 130885885 -14703403 - AluSq SINE Alu -53 260 1 22 0 0 0 chr10 130885986 130886008 -14703280 + AT_rich Low_complexity Low_complexity 1 22 0 1976 154 3 10 chr10 130886057 130886362 -14702926 - AluJo SINE Alu -9 303 1 2333 111 0 19 chr10 130886389 130886704 -14702584 + AluSg SINE Alu 1 309 -1 1871 147 68 0 chr10 130886918 130887031 -14702257 + AluSx SINE Alu 1 105 -207 253 0 54 0 chr10 130887031 130887068 -14702220 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1871 147 68 0 chr10 130887068 130887246 -14702042 + AluSx SINE Alu 105 312 0 326 338 113 0 chr10 130887333 130887493 -14701795 - MIR SINE MIR 0 262 85 195 292 15 15 chr10 130887540 130887605 -14701683 - MIR SINE MIR -186 76 12 404 188 24 0 chr10 130887608 130887693 -14701595 + MER20 DNA MER1_type 1 87 -132 1959 128 3 39 chr10 130887769 130888074 -14701214 + AluSx SINE Alu 3 296 -16 2557 57 0 3 chr10 130888375 130888676 -14700612 + AluY SINE Alu 1 300 -11 1830 160 4 7 chr10 130888692 130888997 -14700291 + AluJo SINE Alu 16 312 0 526 250 7 57 chr10 130889004 130889144 -14700144 + MIR SINE MIR 28 160 -102 2105 120 4 0 chr10 130889146 130889421 -14699867 + AluSx SINE Alu 1 276 -36 261 0 0 0 chr10 130889422 130889451 -14699837 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 625 221 150 19 chr10 130889704 130889917 -14699371 - MIR SINE MIR -13 249 9 2114 121 17 0 chr10 130890070 130890359 -14698929 + AluSx SINE Alu 1 294 -18 2316 82 3 48 chr10 130890532 130890847 -14698441 + AluSp SINE Alu 1 301 -12 752 132 61 0 chr10 130891269 130891383 -14697905 + FLAM_C SINE Alu 10 130 -13 246 292 6 106 chr10 130891514 130891675 -14697613 + MIR3 SINE MIR 49 193 -15 896 149 0 8 chr10 130891684 130891855 -14697433 - FLAM_C SINE Alu 0 170 1 1808 153 22 72 chr10 130891867 130892013 -14697275 - L1MB5 LINE L1 0 6174 6022 8686 24 1 291 chr10 130892013 130893936 -14695352 + SVA Other Other 22 1386 0 1808 153 22 72 chr10 130893936 130893970 -14695318 - L1MB5 LINE L1 -152 6022 5988 2047 121 3 63 chr10 130893970 130894301 -14694987 + AluSx SINE Alu 1 311 -1 1808 153 22 72 chr10 130894301 130894523 -14694765 - L1MB5 LINE L1 -186 5988 5791 2205 130 0 0 chr10 130894534 130894834 -14694454 - AluSq SINE Alu -13 300 1 2385 108 0 10 chr10 130895051 130895365 -14693923 + AluSx SINE Alu 1 311 -1 2286 94 0 55 chr10 130895463 130895793 -14693495 + AluSx SINE Alu 1 312 0 312 280 98 50 chr10 130896745 130896904 -14692384 + MIR SINE MIR 52 216 -46 1859 121 68 4 chr10 130897075 130897356 -14691932 + AluJb SINE Alu 1 299 -13 2226 86 31 3 chr10 130897568 130897860 -14691428 - AluSg SINE Alu -10 300 1 491 189 183 20 chr10 130898280 130898433 -14690855 + MER5B DNA MER1_type 1 178 0 2262 107 0 17 chr10 130899154 130899454 -14689834 + AluSx SINE Alu 1 295 -17 2320 54 0 4 chr10 130899543 130899821 -14689467 + AluY SINE Alu 1 277 -34 1644 159 98 6 chr10 130900186 130900501 -14688787 - MER2 DNA MER2_type 0 344 1 2335 98 0 10 chr10 130901607 130901914 -14687374 - AluSq SINE Alu -9 304 1 2294 85 0 0 chr10 130902004 130902317 -14686971 + AluY SINE Alu 1 313 0 886 138 22 14 chr10 130902329 130902467 -14686821 + FRAM SINE Alu 18 156 -20 410 279 130 13 chr10 130902485 130902639 -14686649 + MIR SINE MIR 43 214 -48 872 144 0 0 chr10 130902972 130903090 -14686198 + FLAM_C SINE Alu 1 118 -15 25 31 0 0 chr10 130903090 130903122 -14686166 + AT_rich Low_complexity Low_complexity 1 32 0 531 235 70 80 chr10 130903400 130903600 -14685688 + MIR SINE MIR 31 228 -34 2457 57 0 0 chr10 130903902 130904212 -14685076 + AluY SINE Alu 1 310 0 2390 92 0 7 chr10 130904323 130904628 -14684660 - AluSg SINE Alu -6 304 2 822 190 23 23 chr10 130905085 130905259 -14684029 + FAM SINE Alu 2 175 0 21 0 0 0 chr10 130905791 130905812 -14683476 + AT_rich Low_complexity Low_complexity 1 21 0 2337 48 24 3 chr10 130906256 130906546 -14682742 - AluY SINE Alu -15 296 1 475 253 174 87 chr10 130907698 130908316 -14680972 - L2 LINE L2 -2 3311 2640 248 299 121 38 chr10 130908415 130908572 -14680716 - L2 LINE L2 -168 3104 2935 472 249 160 13 chr10 130908624 130908849 -14680439 - MIR SINE MIR -2 260 3 438 239 52 8 chr10 130909033 130909167 -14680121 + MER45A DNA AcHobo 39 178 0 27 29 0 0 chr10 130909511 130909545 -14679743 + GC_rich Low_complexity Low_complexity 1 34 0 206 276 11 23 chr10 130909709 130909796 -14679492 + (CCGGG)n Simple_repeat Simple_repeat 2 87 0 1030 207 48 0 chr10 130910136 130910387 -14678901 - Charlie5 DNA MER1_type 0 2624 2362 269 217 80 66 chr10 130910809 130910909 -14678379 + MIR3 SINE MIR 66 166 -42 1939 74 4 4 chr10 130911178 130911422 -14677866 - AluSp SINE Alu -6 307 64 1983 115 10 42 chr10 130911540 130911853 -14677435 + AluSq SINE Alu 1 303 -10 269 173 0 0 chr10 130911962 130912014 -14677274 + AluSp/q SINE Alu 252 303 0 232 252 36 18 chr10 130912023 130912134 -14677154 + L1ME4a LINE L1 5967 6079 -42 1900 174 3 16 chr10 130912144 130912460 -14676828 + AluJo SINE Alu 1 312 0 207 133 0 0 chr10 130913789 130913834 -14675454 + (T)n Simple_repeat Simple_repeat 1 45 0 1396 203 43 30 chr10 130913836 130914137 -14675151 + AluJo SINE Alu 1 305 -7 1912 87 0 38 chr10 130914398 130914663 -14674625 + AluSq SINE Alu 57 311 -2 2262 96 3 32 chr10 130914703 130915015 -14674273 - AluSg SINE Alu -7 303 1 1387 168 19 27 chr10 130915057 130915319 -14673969 - AluJo SINE Alu -24 288 29 2248 116 0 10 chr10 130915931 130916242 -14673046 - AluSx SINE Alu -2 310 3 1780 190 0 0 chr10 130916246 130916541 -14672747 - AluJo SINE Alu -17 295 1 2367 95 16 0 chr10 130916598 130916903 -14672385 - AluSx SINE Alu -2 310 1 2354 112 0 6 chr10 130917781 130918095 -14671193 - AluSx SINE Alu 0 312 1 251 333 117 38 chr10 130918186 130918399 -14670889 + MIR SINE MIR 12 241 -21 2177 117 0 20 chr10 130918802 130919101 -14670187 - AluSx SINE Alu -19 293 1 761 205 37 6 chr10 130919124 130919285 -14670003 - MIR SINE MIR -49 213 48 2333 96 0 0 chr10 130919449 130919742 -14669546 + AluSq SINE Alu 1 293 -20 333 135 0 0 chr10 130920345 130920397 -14668891 - MLT2C1 LTR ERVL -1 519 468 1990 154 0 3 chr10 130920400 130920692 -14668596 - AluSx SINE Alu -21 291 1 553 132 0 0 chr10 130920759 130920835 -14668453 - AluJ/FLAM SINE Alu -234 78 3 1483 183 62 28 chr10 130920837 130921041 -14668247 - MLT2C1 LTR ERVL -37 427 231 2425 92 0 0 chr10 130921041 130921344 -14667944 - AluSx SINE Alu -7 305 3 1483 183 62 28 chr10 130921344 130921457 -14667831 - MLT2C1 LTR ERVL -233 231 34 1837 175 26 0 chr10 130921810 130922113 -14667175 - AluJb SINE Alu -1 311 1 1826 108 0 16 chr10 130922715 130922966 -14666322 + AluSx SINE Alu 58 304 -8 1342 226 93 41 chr10 130923040 130923129 -14666159 - L1ME1 LINE L1 -5 6161 6078 1697 151 38 34 chr10 130923129 130923421 -14665867 + AluJo SINE Alu 1 293 -19 2352 109 0 3 chr10 130923425 130923736 -14665552 + AluSx SINE Alu 1 310 -2 1342 226 93 41 chr10 130923736 130923803 -14665485 - L1ME1 LINE L1 -90 6076 6014 201 39 0 0 chr10 130923803 130923829 -14665459 + (CCCCCA)n Simple_repeat Simple_repeat 3 28 0 1342 226 93 41 chr10 130923829 130923848 -14665440 - L1ME1 LINE L1 -152 6014 5997 2349 98 0 7 chr10 130923848 130924154 -14665134 - AluSc SINE Alu -5 304 1 1342 226 93 41 chr10 130924154 130924457 -14664831 - L1ME1 LINE L1 -169 5997 5651 1450 171 67 19 chr10 130924547 130924842 -14664446 - AluJo SINE Alu 0 308 1 2361 85 0 0 chr10 130925467 130925774 -14663514 - AluSx SINE Alu 0 307 1 1600 178 0 18 chr10 130926096 130926371 -14662917 + AluJb SINE Alu 42 311 -1 2066 140 0 3 chr10 130927060 130927353 -14661935 - AluSx SINE Alu -20 292 1 259 319 89 0 chr10 130927660 130927795 -14661493 + MIR3 SINE MIR 51 197 -11 2302 88 10 10 chr10 130928379 130928686 -14660602 + AluSx SINE Alu 6 312 0 351 65 0 0 chr10 130928767 130928813 -14660475 + (CA)n Simple_repeat Simple_repeat 2 47 0 2047 149 7 10 chr10 130929116 130929424 -14659864 + AluJo SINE Alu 1 307 -5 1978 163 100 42 chr10 130929426 130929638 -14659650 - Tigger2a DNA MER2_type -2274 434 236 2065 121 36 16 chr10 130929638 130929943 -14659345 + AluSx SINE Alu 1 311 -1 1978 163 100 42 chr10 130929943 130930140 -14659148 - Tigger2a DNA MER2_type -2472 236 1 759 193 81 30 chr10 130930303 130930500 -14658788 + MER3 DNA MER1_type 3 209 0 21 0 0 0 chr10 130930508 130930529 -14658759 + AT_rich Low_complexity Low_complexity 1 21 0 300 252 261 26 chr10 130930532 130930647 -14658641 + MIR SINE MIR 36 177 -85 2577 48 0 3 chr10 130930773 130931067 -14658221 - AluY SINE Alu -18 293 1 826 168 0 0 chr10 130931326 130931451 -14657837 + FLAM_C SINE Alu 1 125 -18 1263 168 9 19 chr10 130931465 130931599 -14657689 + AluJo SINE Alu 1 134 -178 1307 184 114 29 chr10 130931599 130931871 -14657417 + AluJb SINE Alu 1 295 -17 1263 168 9 19 chr10 130931871 130931950 -14657338 + AluJo SINE Alu 134 212 -100 2618 56 0 3 chr10 130932210 130932515 -14656773 + AluY SINE Alu 1 304 -7 1448 75 0 16 chr10 130932517 130932704 -14656584 + AluY SINE Alu 126 309 -2 374 239 54 116 chr10 130932737 130933013 -14656275 + L1MC5 LINE L1 7633 7891 -70 1074 165 6 11 chr10 130933014 130933190 -14656098 - AluJb SINE Alu -4 308 134 1575 156 50 63 chr10 130933190 130933492 -14655796 - AluSx SINE Alu -14 298 1 1059 133 0 37 chr10 130933546 130933734 -14655554 + AluSg/x SINE Alu 121 301 -9 1795 97 6 109 chr10 130934712 130935041 -14654247 + AluSx SINE Alu 1 295 -17 850 124 28 14 chr10 130935063 130935208 -14654080 - FRAM SINE Alu -30 146 1 227 224 52 0 chr10 130935210 130935268 -14654020 + L2 LINE L2 1769 1829 -1485 1736 101 16 59 chr10 130935683 130935990 -14653298 - AluSg SINE Alu -16 294 1 294 333 43 99 chr10 130936099 130936444 -14652844 + L2 LINE L2 2925 3250 -22 2152 98 0 23 chr10 130936810 130937115 -14652173 - AluSx SINE Alu -10 302 5 198 0 0 0 chr10 130938046 130938068 -14651220 + (T)n Simple_repeat Simple_repeat 1 22 0 609 218 8 8 chr10 130938874 130939007 -14650281 + FRAM SINE Alu 1 125 -51 1964 142 0 7 chr10 130939047 130939350 -14649938 - AluJb SINE Alu -11 301 1 189 0 0 0 chr10 130939427 130939448 -14649840 + (T)n Simple_repeat Simple_repeat 1 21 0 2161 135 34 99 chr10 130939448 130939945 -14649343 - L1MB4 LINE L1 -34 6146 5682 630 170 0 0 chr10 130939945 130940045 -14649243 + MER7A DNA MER2_type 1 98 -248 2361 64 10 3 chr10 130940049 130940360 -14648928 - AluSq SINE Alu 0 313 1 596 146 19 19 chr10 130940360 130940463 -14648825 - L1MB4 LINE L1 -509 5674 5572 2240 99 0 7 chr10 130940590 130940892 -14648396 + AluSx SINE Alu 1 300 -12 1744 128 34 24 chr10 130940903 130941200 -14648088 + AluSq SINE Alu 1 300 -13 499 258 223 8 chr10 130941555 130941811 -14647477 + L2 LINE L2 3003 3313 0 2199 68 0 0 chr10 130943761 130944066 -14645222 - AluY SINE Alu 0 305 1 1546 168 108 9 chr10 130944228 130944649 -14644639 + MLT1F1 LTR MaLR 18 491 -51 1784 149 7 13 chr10 130944655 130944781 -14644507 + AluSx SINE Alu 11 136 -176 1899 100 28 17 chr10 130944781 130945071 -14644217 + AluSg SINE Alu 1 293 -17 1784 149 7 13 chr10 130945071 130945246 -14644042 + AluSx SINE Alu 136 310 -2 268 200 0 0 chr10 130945311 130945356 -14643932 + MLT1F1 LTR MaLR 515 559 -8 2590 109 58 22 chr10 130946248 130946617 -14642671 + MSTA LTR MaLR 1 355 -73 2205 97 7 0 chr10 130946617 130946915 -14642373 - AluSg SINE Alu -10 300 1 2067 135 0 0 chr10 130946915 130947212 -14642076 - AluSx SINE Alu -15 297 1 2590 109 58 22 chr10 130947212 130947254 -14642034 + MSTA LTR MaLR 354 428 0 964 124 0 0 chr10 130947317 130947454 -14641834 + AluSq/x SINE Alu 5 141 -172 1962 123 0 41 chr10 130947455 130947804 -14641484 + AluSx SINE Alu 1 312 0 462 286 40 60 chr10 130947813 130948039 -14641249 + L1M4 LINE L1 4816 5038 -1108 2014 129 3 19 chr10 130948039 130948356 -14640932 + AluJb SINE Alu 1 312 0 462 286 40 60 chr10 130948356 130948377 -14640911 + L1M4 LINE L1 5038 5058 -1088 403 172 355 0 chr10 130948378 130948471 -14640817 + FLAM_C SINE Alu 1 126 -7 2009 132 0 0 chr10 130948478 130948766 -14640522 + AluSx SINE Alu 1 288 -24 5250 123 8 12 chr10 130948766 130949426 -14639862 + L1MA3 LINE L1 5481 6139 -166 2178 106 0 28 chr10 130949426 130949746 -14639542 + AluSx SINE Alu 1 311 -1 5250 123 8 12 chr10 130949746 130949913 -14639375 + L1MA3 LINE L1 6139 6305 0 2076 136 0 0 chr10 130949971 130950280 -14639008 + AluSq SINE Alu 1 309 -4 31 0 0 0 chr10 130950312 130950343 -14638945 + AT_rich Low_complexity Low_complexity 1 31 0 841 100 17 0 chr10 130950343 130950463 -14638825 - FLAM_C SINE Alu -11 122 1 510 130 0 0 chr10 130950480 130950557 -14638731 + L1MB3 LINE L1 6072 6148 -35 653 226 0 0 chr10 130950560 130950684 -14638604 + FLAM_C SINE Alu 2 125 -8 1794 124 3 52 chr10 130950692 130950999 -14638289 - AluSx SINE Alu -20 292 1 2250 82 0 3 chr10 130951034 130951325 -14637963 - AluSp SINE Alu -15 298 9 30 27 0 0 chr10 130951336 130951373 -14637915 + AT_rich Low_complexity Low_complexity 1 37 0 1697 130 43 11 chr10 130951570 130951868 -14637420 + AluSx SINE Alu 2 308 0 2030 104 23 7 chr10 130951870 130952178 -14637110 + AluSq SINE Alu 1 313 0 226 100 0 0 chr10 130952309 130952339 -14636949 + Alu SINE Alu 60 89 -214 875 159 34 45 chr10 130952369 130952545 -14636743 + MER20 DNA MER1_type 46 219 0 509 213 255 23 chr10 130953541 130953804 -14635484 - MER5C DNA MER1_type 0 324 1 2370 87 0 0 chr10 130954920 130955231 -14634057 + AluY SINE Alu 1 311 0 650 120 0 90 chr10 130955266 130955399 -14633889 + FLAM_C SINE Alu 23 143 0 1801 142 7 7 chr10 130955604 130955930 -14633358 - AluSx SINE Alu 0 326 1 2034 118 3 7 chr10 130957359 130957664 -14631624 + AluSq SINE Alu 1 304 -9 27 29 0 0 chr10 130957784 130957818 -14631470 + AT_rich Low_complexity Low_complexity 1 34 0 1764 117 57 10 chr10 130957827 130958126 -14631162 + AluSp SINE Alu 1 313 0 195 42 0 0 chr10 130958150 130958174 -14631114 + (T)n Simple_repeat Simple_repeat 1 24 0 2199 84 7 3 chr10 130958437 130958733 -14630555 - AluY SINE Alu -14 297 1 22 35 0 0 chr10 130958834 130958863 -14630425 + AT_rich Low_complexity Low_complexity 1 29 0 329 277 92 15 chr10 130960642 130960772 -14628516 + MIR3 SINE MIR 2 141 -67 22 0 0 0 chr10 130961404 130961426 -14627862 + GC_rich Low_complexity Low_complexity 1 22 0 2262 46 42 0 chr10 130962545 130962828 -14626460 - AluY SINE Alu -16 295 1 1585 112 0 0 chr10 130962931 130963154 -14626134 + AluSg/x SINE Alu 68 290 -22 2450 49 0 10 chr10 130963469 130963774 -14625514 + AluY SINE Alu 10 311 0 269 93 37 74 chr10 130963781 130963835 -14625453 + L1MB1 LINE L1 6117 6168 0 1759 161 42 15 chr10 130963839 130964174 -14625114 + MER2 DNA MER2_type 1 344 0 1654 155 42 3 chr10 130965915 130966199 -14623089 - AluJo SINE Alu -6 306 12 435 228 55 69 chr10 130966424 130966508 -14622780 + MIR SINE MIR 6 89 -173 1395 194 96 10 chr10 130966508 130966822 -14622466 + MER58B DNA MER1_type 1 341 0 435 228 55 69 chr10 130966822 130966882 -14622406 + MIR SINE MIR 89 148 -114 2058 130 0 0 chr10 130966884 130967185 -14622103 + AluSx SINE Alu 1 301 -11 24 32 0 0 chr10 130967256 130967287 -14622001 + AT_rich Low_complexity Low_complexity 1 31 0 2179 107 3 0 chr10 130967621 130967930 -14621358 - AluSx SINE Alu -2 310 1 1949 132 7 3 chr10 130968173 130968476 -14620812 - AluJb SINE Alu -8 304 1 839 211 67 5 chr10 130968780 130968974 -14620314 - MER3 DNA MER1_type -2 207 2 363 226 27 41 chr10 130969050 130969196 -14620092 + GA-rich Low_complexity Low_complexity 4 147 0 22 0 0 0 chr10 130969849 130969871 -14619417 + AT_rich Low_complexity Low_complexity 1 22 0 203 56 56 0 chr10 130970537 130970573 -14618715 + T-rich Low_complexity Low_complexity 1 38 0 1830 126 0 4 chr10 130970582 130970851 -14618437 - AluSx SINE Alu -44 268 1 354 277 176 20 chr10 130970851 130970999 -14618289 - MER5A DNA MER1_type -10 179 9 326 147 107 0 chr10 130971122 130971197 -14618091 - MIR SINE MIR -59 149 67 670 254 67 46 chr10 130971311 130971460 -14617828 - MIR SINE MIR 0 262 105 2079 90 13 27 chr10 130971460 130971759 -14617529 + AluSx SINE Alu 1 295 -17 670 254 67 46 chr10 130971759 130971849 -14617439 - MIR SINE MIR -157 105 18 481 139 8 92 chr10 130972247 130972502 -14616786 + AluJo SINE Alu 1 306 -6 2037 124 3 0 chr10 130973082 130973380 -14615908 + AluSx SINE Alu 1 299 -13 186 43 0 0 chr10 130973426 130973449 -14615839 + (T)n Simple_repeat Simple_repeat 1 23 0 2356 49 7 10 chr10 130973582 130973887 -14615401 - AluY SINE Alu -7 304 1 273 295 62 9 chr10 130974206 130974318 -14614970 - MIR SINE MIR -98 164 47 27 29 0 0 chr10 130974995 130975029 -14614259 + GC_rich Low_complexity Low_complexity 1 34 0 22 0 0 0 chr10 130975169 130975191 -14614097 + GC_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr10 130975562 130975584 -14613704 + GC_rich Low_complexity Low_complexity 1 22 0 203 299 0 35 chr10 130975740 130975827 -14613461 + G-rich Low_complexity Low_complexity 4 87 0 252 0 0 0 chr10 130975854 130975882 -14613406 + (CGG)n Simple_repeat Simple_repeat 1 28 0 224 89 0 67 chr10 130975966 130976011 -14613277 + (CAG)n Simple_repeat Simple_repeat 3 44 0 234 0 0 0 chr10 130977635 130977661 -14611627 + (T)n Simple_repeat Simple_repeat 1 26 0 1644 163 29 0 chr10 130981004 130981311 -14607977 + 7SLRNA srpRNA srpRNA 1 316 -4 2071 130 0 0 chr10 130981378 130981677 -14607611 + AluSx SINE Alu 3 301 -11 24 32 0 0 chr10 130981748 130981779 -14607509 + AT_rich Low_complexity Low_complexity 1 31 0 2179 107 3 0 chr10 130982113 130982422 -14606866 - AluSx SINE Alu -2 310 1 1949 132 7 3 chr10 130982665 130982968 -14606320 - AluJb SINE Alu -8 304 1 839 211 67 5 chr10 130983272 130983466 -14605822 - MER3 DNA MER1_type -2 207 2 363 226 27 41 chr10 130983542 130983688 -14605600 + GA-rich Low_complexity Low_complexity 4 147 0 1019 112 0 7 chr10 130984673 130984816 -14604472 + FLAM_C SINE Alu 1 142 -1 1754 116 103 31 chr10 130984817 130985109 -14604179 + AluSq SINE Alu 1 313 0 261 0 0 0 chr10 130986221 130986250 -14603038 + (TG)n Simple_repeat Simple_repeat 2 30 0 249 177 16 48 chr10 130986925 130986987 -14602301 + L2 LINE L2 3252 3311 -2 368 146 39 58 chr10 130986998 130987046 -14602242 + MER46A DNA MER2_type 1 48 -188 2126 90 31 3 chr10 130987046 130987334 -14601954 - AluSc SINE Alu -13 296 1 368 146 39 58 chr10 130987334 130987388 -14601900 + MER46A DNA MER2_type 48 101 -135 931 117 0 36 chr10 130987388 130987525 -14601763 - FRAM SINE Alu -45 131 1 892 110 29 0 chr10 130987527 130987663 -14601625 + MER46A DNA MER2_type 97 236 0 2225 94 35 0 chr10 130988699 130988985 -14600303 + AluSx SINE Alu 1 296 -16 2111 128 0 7 chr10 130989018 130989316 -14599972 + AluSx SINE Alu 1 296 -16 328 267 47 12 chr10 130989371 130989543 -14599745 - HAL1b LINE L1 -82 1266 1195 301 248 31 93 chr10 130989684 130989845 -14599443 - L1ME LINE L1 -322 5799 5649 229 269 31 0 chr10 130990251 130990330 -14598958 - MIR SINE MIR -67 141 78 459 287 87 7 chr10 130990404 130990554 -14598734 + MER91B DNA MER1_type 28 189 -1 188 300 62 50 chr10 130990941 130991021 -14598267 - MIR3 SINE MIR -19 189 109 1598 174 26 79 chr10 130991137 130991528 -14597760 - MLT1B LTR MaLR -7 383 14 342 263 21 21 chr10 130991728 130991823 -14597465 - L3 LINE CR1 -80 1497 1403 206 32 32 0 chr10 130991852 130991883 -14597405 + (TA)n Simple_repeat Simple_repeat 2 33 0 350 269 19 28 chr10 130992032 130992140 -14597148 - L3 LINE CR1 -242 1335 1229 839 169 45 19 chr10 130992165 130992340 -14596948 + FAM SINE Alu 1 47 0 2149 94 0 17 chr10 130992518 130992860 -14596428 - AluSx SINE Alu 0 337 1 2277 110 0 10 chr10 130993817 130993984 -14595304 - AluSg SINE Alu -12 298 134 2392 85 10 0 chr10 130993984 130994291 -14594997 - AluY SINE Alu -1 310 1 2277 110 0 10 chr10 130994291 130994423 -14594865 - AluSg SINE Alu -176 134 2 806 88 0 96 chr10 130994438 130994574 -14594714 - AluSg/x SINE Alu 0 309 187 190 333 39 0 chr10 130994612 130994690 -14594598 + MIR SINE MIR 36 116 -92 1989 131 10 54 chr10 130994694 130995008 -14594280 - AluSq SINE Alu -13 300 1 1881 153 14 0 chr10 130995014 130995302 -14593986 - AluSq SINE Alu -21 292 1 2042 138 0 13 chr10 130995431 130995729 -14593559 + AluSx SINE Alu 1 294 -18 625 294 70 32 chr10 130995857 130996277 -14593011 + L1ME LINE L1 5376 5824 -297 1348 146 0 50 chr10 130996277 130996516 -14592772 + AluJb SINE Alu 81 307 -5 1230 140 42 76 chr10 130996552 130996788 -14592500 + AluJo SINE Alu 76 303 -9 2002 132 30 23 chr10 130998350 130998461 -14590827 + AluJo SINE Alu 1 110 -202 2225 118 63 17 chr10 130998461 130998809 -14590479 - THE1B LTR MaLR 0 364 1 2002 132 30 23 chr10 130998809 130999000 -14590288 + AluJo SINE Alu 110 305 -7 6167 107 24 40 chr10 130999237 130999439 -14589849 + L1MA5A LINE L1 5161 5365 -932 325 114 14 43 chr10 130999439 130999509 -14589779 + L1PB1 LINE L1 6083 6150 -1 6167 107 24 40 chr10 130999509 130999570 -14589718 + L1MA5A LINE L1 5365 5425 -872 2443 100 0 3 chr10 130999570 130999879 -14589409 + AluSx SINE Alu 1 308 -4 6167 107 24 40 chr10 130999879 131000635 -14588653 + L1MA5A LINE L1 5425 6161 -136 2322 89 63 23 chr10 131000635 131000985 -14588303 + THE1B LTR MaLR 1 364 0 6167 107 24 40 chr10 131000985 131001120 -14588168 + L1MA5A LINE L1 6161 6297 0 524 254 74 52 chr10 131001318 131001761 -14587527 + MLT1K LTR MaLR 10 509 -79 659 246 66 12 chr10 131002298 131002465 -14586823 - MIR SINE MIR -79 183 8 524 241 51 15 chr10 131002514 131002651 -14586637 - MIR SINE MIR -55 207 66 269 138 0 35 chr10 131002745 131002803 -14586485 + (TTTTC)n Simple_repeat Simple_repeat 5 60 0 1222 140 8 74 chr10 131002811 131002828 -14586460 - AluJb SINE Alu -1 311 294 2191 102 61 0 chr10 131002828 131003121 -14586167 - AluSx SINE Alu -1 311 1 1222 140 8 74 chr10 131003121 131003346 -14585942 - AluJb SINE Alu -18 294 85 180 231 187 22 chr10 131003899 131003990 -14585298 + L2 LINE L2 3201 3306 -7 502 51 0 0 chr10 131004261 131004320 -14584968 + AluS SINE Alu 22 80 -232 2530 50 3 0 chr10 131004361 131004660 -14584628 - AluY SINE Alu -11 300 1 327 284 8 128 chr10 131004672 131004788 -14584500 + MER102b DNA MER1_type 103 177 -1251 1904 121 31 0 chr10 131004788 131005045 -14584243 - AluSx SINE Alu -14 298 34 327 284 8 128 chr10 131005045 131005171 -14584117 + MER102b DNA MER1_type 177 316 -25 2135 140 0 0 chr10 131005209 131005509 -14583779 - AluSx SINE Alu -12 300 1 218 325 123 32 chr10 131006449 131006603 -14582685 + L3b LINE CR1 1399 1566 -17 325 224 0 0 chr10 131006969 131007036 -14582252 - MER94 DNA DNA -67 67 1 21 36 0 0 chr10 131007255 131007283 -14582005 + AT_rich Low_complexity Low_complexity 1 28 0 2192 120 3 7 chr10 131007383 131007682 -14581606 - AluSx SINE Alu -14 298 1 6629 65 47 6 chr10 131007685 131008338 -14580950 - L1PA7 LINE L1 -7 6147 5469 2518 81 0 3 chr10 131008338 131008648 -14580640 - AluY SINE Alu -2 309 1 6629 65 47 6 chr10 131008648 131008901 -14580387 - L1PA7 LINE L1 -685 5469 5228 667 185 0 59 chr10 131008901 131009036 -14580252 - FLAM_A SINE Alu -6 127 1 225 365 56 11 chr10 131009205 131009383 -14579905 + MIR SINE MIR 5 190 -72 554 223 223 62 chr10 131009879 131010349 -14578939 - MER34C LTR ERV1 0 585 40 2314 101 15 71 chr10 131010709 131011104 -14578184 + THE1C LTR MaLR 1 373 -2 2145 126 7 0 chr10 131011104 131011390 -14577898 + AluSx SINE Alu 1 288 -24 284 318 114 0 chr10 131011576 131011708 -14577580 - MLT1K LTR MaLR -8 580 434 201 74 0 0 chr10 131011708 131011735 -14577553 + (T)n Simple_repeat Simple_repeat 1 27 0 1124 226 9 0 chr10 131012170 131012391 -14576897 - MER58A DNA MER1_type 0 224 2 1016 125 5 37 chr10 131012458 131012680 -14576608 + L1MB1 LINE L1 5224 5439 -729 1333 148 0 14 chr10 131012684 131012900 -14576388 + AluJo SINE Alu 88 300 -12 3745 149 39 46 chr10 131012905 131013143 -14576145 + L1MB1 LINE L1 5428 5666 -502 2292 98 0 7 chr10 131013143 131013438 -14575850 + AluSc SINE Alu 1 293 -16 3745 149 39 46 chr10 131013438 131013883 -14575405 + L1MB1 LINE L1 5666 6108 -60 2677 48 0 10 chr10 131013883 131014197 -14575091 + AluY SINE Alu 1 311 0 3745 149 39 46 chr10 131014197 131014258 -14575030 + L1MB1 LINE L1 6108 6168 0 1768 161 42 15 chr10 131014262 131014597 -14574691 + MER2 DNA MER2_type 1 344 0 1800 155 42 3 chr10 131016165 131016449 -14572839 - AluJo SINE Alu -6 306 12 306 275 99 58 chr10 131016470 131016641 -14572647 - L1MC4a LINE L1 -1876 5932 5755 514 201 101 101 chr10 131016674 131016758 -14572530 + MIR SINE MIR 6 89 -173 1414 194 96 10 chr10 131016758 131017072 -14572216 + MER58B DNA MER1_type 1 341 0 514 201 101 101 chr10 131017072 131017134 -14572154 + MIR SINE MIR 89 155 -107 2478 90 0 6 chr10 131017134 131017445 -14571843 + AluSq SINE Alu 1 309 -4 514 201 101 101 chr10 131017445 131017496 -14571792 + MIR SINE MIR 154 204 -58 2236 108 0 10 chr10 131017635 131017948 -14571340 - AluSx SINE Alu 0 310 1 270 271 94 0 chr10 131018083 131018168 -14571120 - L1MC4a LINE L1 -542 5579 5487 373 255 41 20 chr10 131018353 131018451 -14570837 - MIR SINE MIR -115 147 48 1293 175 175 0 chr10 131018539 131018796 -14570492 - AluJb SINE Alu 0 302 1 1017 161 135 0 chr10 131019832 131020024 -14569264 - MER20 DNA MER1_type 0 219 2 261 290 22 80 chr10 131020622 131020760 -14568528 + MIR3 SINE MIR 4 133 -75 261 139 0 0 chr10 131021995 131022038 -14567250 + (TG)n Simple_repeat Simple_repeat 1 43 0 407 304 0 8 chr10 131022312 131022437 -14566851 - MIR3 SINE MIR -7 201 78 286 288 14 0 chr10 131022573 131022646 -14566642 - L2 LINE L2 -61 3211 3138 2222 102 54 0 chr10 131022920 131023215 -14566073 + AluSx SINE Alu 1 311 -1 212 200 138 0 chr10 131024031 131024096 -14565192 - L2 LINE L2 -183 3089 3016 192 297 66 22 chr10 131024552 131024643 -14564645 - MIR3 SINE MIR -45 163 69 2276 160 17 14 chr10 131024869 131025287 -14564001 - L1MB7 LINE L1 -16 6168 5750 2082 140 3 16 chr10 131025590 131025897 -14563391 + AluSx SINE Alu 1 303 -9 2441 202 84 37 chr10 131026091 131026709 -14562579 - L1ME1 LINE L1 -1 6165 5519 556 221 18 61 chr10 131026805 131026968 -14562320 - LTR16C LTR ERVL 0 491 336 229 273 112 28 chr10 131026986 131027129 -14562159 - LTR16C LTR ERVL -271 220 66 2615 58 0 0 chr10 131027203 131027511 -14561777 - AluY SINE Alu -3 308 1 1150 147 54 29 chr10 131027801 131028005 -14561283 + MER3 DNA MER1_type 1 209 0 446 193 0 0 chr10 131028020 131028103 -14561185 - L1MB7 LINE L1 -509 5733 5651 2396 71 3 7 chr10 131028151 131028447 -14560841 - AluY SINE Alu -16 295 1 23 0 0 0 chr10 131028520 131028543 -14560745 + AT_rich Low_complexity Low_complexity 1 23 0 7690 44 12 10 chr10 131028559 131030092 -14559196 - SVA Other Other -799 1379 1 2413 87 3 16 chr10 131030479 131030789 -14558499 - AluSg SINE Alu -4 306 1 472 273 15 36 chr10 131030892 131031049 -14558239 + MIR3 SINE MIR 25 176 -51 435 149 71 101 chr10 131031099 131031163 -14558125 - MER103 DNA DNA -1 165 101 2360 93 3 0 chr10 131031163 131031454 -14557834 - AluSx SINE Alu -20 292 1 435 149 71 101 chr10 131031454 131031557 -14557731 - MER103 DNA DNA -65 101 3 248 194 9 83 chr10 131031870 131031978 -14557310 + L1MC5 LINE L1 7818 7917 -44 187 321 222 0 chr10 131032193 131032274 -14557014 - MIR SINE MIR -110 152 54 635 246 38 0 chr10 131033512 131033695 -14555593 + MER33 DNA MER1_type 20 209 -115 511 167 250 0 chr10 131033695 131033803 -14555485 + AluJo SINE Alu 1 135 -177 605 185 6 62 chr10 131033803 131033981 -14555307 + MER33 DNA MER1_type 157 324 0 341 283 60 54 chr10 131034005 131034189 -14555099 + MIR SINE MIR 43 227 -35 196 206 191 0 chr10 131034215 131034278 -14555010 - L2 LINE L2 -6 3266 3192 249 259 69 0 chr10 131034321 131034379 -14554909 + MIR SINE MIR 43 104 -104 214 301 137 55 chr10 131035599 131035891 -14553397 - L2 LINE L2 -42 3230 2915 2164 111 0 0 chr10 131037059 131037356 -14551932 + AluSg SINE Alu 5 301 -9 225 94 0 0 chr10 131037356 131037388 -14551900 + (GGAA)n Simple_repeat Simple_repeat 1 32 0 682 194 0 0 chr10 131037421 131037550 -14551738 + L1M3 LINE L1 5570 5698 -482 1410 192 11 92 chr10 131038764 131038953 -14550335 + MLT1B LTR MaLR 1 145 -245 2088 104 0 13 chr10 131038953 131039252 -14550036 + AluSg SINE Alu 1 295 -15 1410 192 11 92 chr10 131039252 131039442 -14549846 + MLT1B LTR MaLR 145 349 -41 1523 236 113 59 chr10 131039995 131040570 -14548718 + L1ME1 LINE L1 5556 6161 -5 4752 39 30 0 chr10 131041451 131042016 -14547272 + L1PA3 LINE L1 5574 6155 0 306 0 0 0 chr10 131042485 131042519 -14546769 + (TG)n Simple_repeat Simple_repeat 1 34 0 225 0 0 0 chr10 131042520 131042545 -14546743 + (GA)n Simple_repeat Simple_repeat 1 25 0 258 284 86 9 chr10 131043018 131043134 -14546154 - MIR SINE MIR -29 233 109 1654 114 9 0 chr10 131044123 131044350 -14544938 + AluSg/x SINE Alu 65 293 -19 195 214 0 0 chr10 131045153 131045195 -14544093 - L3 LINE CR1 -81 1496 1455 468 262 37 102 chr10 131045425 131045527 -14543761 - MIR SINE MIR -29 233 126 2253 109 3 0 chr10 131045527 131045838 -14543450 - AluSx SINE Alu 0 312 1 468 262 37 102 chr10 131045838 131045979 -14543309 - MIR SINE MIR -136 126 6 495 256 85 35 chr10 131046205 131046404 -14542884 - MIR SINE MIR -38 224 16 2081 166 9 6 chr10 131047535 131047878 -14541410 + MER2 DNA MER2_type 1 344 0 213 404 53 10 chr10 131047900 131048108 -14541180 - L2 LINE L2 -113 3159 2943 2304 98 0 7 chr10 131048277 131048584 -14540704 - AluSx SINE Alu -7 305 1 374 292 73 22 chr10 131049503 131049640 -14539648 - MIR SINE MIR -107 155 12 1815 133 3 48 chr10 131050751 131050877 -14538411 + AluJo SINE Alu 1 131 -181 2269 78 3 0 chr10 131050877 131051171 -14538117 - AluSp SINE Alu -18 295 1 1815 133 3 48 chr10 131051171 131051359 -14537929 + AluJo SINE Alu 131 301 -11 2002 87 7 30 chr10 131051655 131051955 -14537333 - AluSx SINE Alu -15 297 5 1285 209 125 26 chr10 131052479 131052790 -14536498 - MLT1A2 LTR MaLR -32 342 1 381 320 49 30 chr10 131052797 131053000 -14536288 + MIR SINE MIR 49 255 -7 524 283 55 95 chr10 131053445 131053898 -14535390 + MLT1K LTR MaLR 151 585 -3 2142 94 0 16 chr10 131054163 131054491 -14534797 - AluY SINE Alu 0 311 1 189 107 0 0 chr10 131054512 131054540 -14534748 + (GGAGA)n Simple_repeat Simple_repeat 4 31 0 470 148 71 107 chr10 131054722 131054826 -14534462 + MER103 DNA DNA 3 100 -66 2231 93 3 0 chr10 131054826 131055117 -14534171 + AluSx SINE Alu 1 292 -20 470 148 71 107 chr10 131055117 131055181 -14534107 + MER103 DNA DNA 100 165 -1 453 298 6 37 chr10 131055228 131055389 -14533899 - MIR3 SINE MIR -28 180 25 2290 87 3 16 chr10 131055492 131055803 -14533485 + AluSg SINE Alu 1 307 -3 288 0 0 0 chr10 131056187 131056219 -14533069 + (TCTCCC)n Simple_repeat Simple_repeat 1 32 0 7313 51 11 6 chr10 131056224 131057723 -14531565 + SVA Other Other 32 1381 -5 23 0 0 0 chr10 131057737 131057760 -14531528 + AT_rich Low_complexity Low_complexity 1 23 0 2270 71 3 7 chr10 131057833 131058129 -14531159 + AluY SINE Alu 1 295 -16 449 193 0 0 chr10 131058177 131058260 -14531028 + L1MC/D LINE L1 5651 5733 -509 1186 147 54 29 chr10 131058275 131058479 -14530809 - MER3 DNA MER1_type 0 209 1 2408 74 0 0 chr10 131058769 131059079 -14530209 + AluY SINE Alu 1 310 -1 1891 167 3 10 chr10 131059757 131059922 -14529366 - AluJb SINE Alu -4 298 134 2206 96 0 22 chr10 131059922 131060095 -14529193 - AluSx SINE Alu -7 305 141 1917 89 55 20 chr10 131060095 131060388 -14528900 - AluSp SINE Alu -10 303 1 2206 96 0 22 chr10 131060388 131060526 -14528762 - AluSx SINE Alu -171 141 1 1891 167 3 10 chr10 131060526 131060660 -14528628 - AluJb SINE Alu -168 134 1 831 115 16 16 chr10 131060678 131060800 -14528488 - FLAM_C SINE Alu -10 123 2 22 0 0 0 chr10 131060804 131060826 -14528462 + AT_rich Low_complexity Low_complexity 1 22 0 2227 122 0 0 chr10 131061051 131061362 -14527926 + AluSx SINE Alu 2 312 0 900 188 97 29 chr10 131061732 131061939 -14527349 - MER58A DNA MER1_type 0 224 4 831 153 0 0 chr10 131062069 131062200 -14527088 - FLAM_C SINE Alu -12 131 1 585 182 68 68 chr10 131062389 131062521 -14526767 - AluJb SINE Alu -179 133 2 2278 85 0 16 chr10 131062531 131062838 -14526450 - AluSc SINE Alu -7 302 1 304 323 7 19 chr10 131063148 131063303 -14525985 + GA-rich Low_complexity Low_complexity 4 156 0 296 239 0 8 chr10 131063323 131063440 -14525848 + GA-rich Low_complexity Low_complexity 2 117 0 1242 95 0 0 chr10 131063441 131063620 -14525668 + (GGA)n Simple_repeat Simple_repeat 2 180 0 316 332 66 60 chr10 131064168 131064487 -14524801 - L2 LINE L2 -2 3270 2950 185 289 60 36 chr10 131064640 131064723 -14524565 - L2 LINE L2 -668 2646 2562 2188 123 0 0 chr10 131064757 131065066 -14524222 - AluSx SINE Alu -3 309 1 255 278 22 0 chr10 131065516 131065608 -14523680 + MIR SINE MIR 61 153 -74 180 0 0 0 chr10 131065928 131065948 -14523340 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 445 311 25 0 chr10 131066682 131066801 -14522487 - L2 LINE L2 -3 3310 3189 251 318 100 0 chr10 131067171 131067322 -14521966 + MIR SINE MIR 1 164 -56 827 144 7 0 chr10 131067567 131067720 -14521568 + CT-rich Low_complexity Low_complexity 3 156 0 1925 179 59 0 chr10 131067968 131068292 -14520996 + MER2 DNA MER2_type 2 344 0 272 346 69 31 chr10 131068352 131068511 -14520777 - MIR SINE MIR -29 233 69 615 138 0 0 chr10 131068599 131068686 -14520602 + AluS SINE Alu 2 88 -224 694 206 144 41 chr10 131070058 131070252 -14519036 + MER58A DNA MER1_type 1 214 -10 2419 72 0 0 chr10 131070269 131070574 -14518714 + AluY SINE Alu 1 305 -6 3831 134 54 5 chr10 131070677 131071302 -14517986 + L1PB1 LINE L1 5491 6146 -5 25 0 0 0 chr10 131071302 131071327 -14517961 + AT_rich Low_complexity Low_complexity 1 25 0 990 291 125 11 chr10 131071336 131071697 -14517591 - MLT1L LTR MaLR -8 607 206 295 263 13 13 chr10 131071672 131071748 -14517540 - LTR67 LTR ERVL -385 172 97 * 291 310 33 49 chr10 131072093 131072277 -14517011 - MIR SINE MIR -80 182 2 357 305 75 19 chr10 131072786 131072833 -14516455 + L2 LINE L2 1848 1891 -1423 1981 217 13 20 chr10 131072833 131073229 -14516059 + MSTD LTR MaLR 1 393 -3 357 305 75 19 chr10 131073229 131073394 -14515894 + L2 LINE L2 1891 2072 -1242 384 224 61 20 chr10 131073459 131073557 -14515731 - MIR SINE MIR -10 252 151 282 284 165 0 chr10 131073566 131073675 -14515613 - L2 LINE L2 0 3272 3146 262 257 72 76 chr10 131074054 131074291 -14514997 + L2 LINE L2 2834 3069 -203 2062 91 38 3 chr10 131074521 131074808 -14514480 + AluSx SINE Alu 1 297 -15 261 0 0 0 chr10 131075155 131075184 -14514104 + (TG)n Simple_repeat Simple_repeat 2 30 0 1471 45 11 0 chr10 131075184 131075361 -14513927 - L1PA5 LINE L1 -11 6143 5965 1903 113 10 45 chr10 131076171 131076481 -14512807 + AluSx SINE Alu 1 299 -13 756 280 91 22 chr10 131076481 131076799 -14512489 - L1ME3A LINE L1 -40 6130 5791 347 364 75 0 chr10 131077133 131077306 -14511982 - MER117 DNA MER1_type -3 194 9 201 359 0 26 chr10 131078326 131078443 -14510845 - MIR3 SINE MIR -29 179 66 403 315 123 10 chr10 131078929 131079221 -14510067 - L2 LINE L2 -529 2785 2461 1234 85 11 11 chr10 131079645 131079822 -14509466 - AluSg/x SINE Alu -5 305 129 360 260 96 24 chr10 131079873 131080016 -14509272 - MIR SINE MIR -60 148 32 207 277 0 23 chr10 131080246 131080376 -14508912 + CT-rich Low_complexity Low_complexity 1 127 0 331 219 146 10 chr10 131080733 131080829 -14508459 - L2 LINE L2 0 3272 3164 268 242 40 40 chr10 131081042 131081141 -14508147 + L1ME LINE L1 5681 5779 -383 227 267 0 0 chr10 131081229 131081288 -14508000 - L2 LINE L2 -300 2974 2914 320 256 51 17 chr10 131082289 131082406 -14506882 + MIR3 SINE MIR 81 201 -7 618 258 169 0 chr10 131082460 131082638 -14506650 - MIR SINE MIR -42 220 13 1623 190 129 39 chr10 131082647 131083105 -14506183 + MLT1D LTR MaLR 7 505 0 507 290 41 6 chr10 131084497 131084666 -14504622 + L2 LINE L2 3010 3184 -88 187 322 17 0 chr10 131084801 131084860 -14504428 + L3 LINE CR1 1517 1576 -1 426 241 90 15 chr10 131084924 131085057 -14504231 - MIR SINE MIR -70 192 50 322 237 78 63 chr10 131085176 131085304 -14503984 + MIR SINE MIR 8 144 -64 269 345 129 14 chr10 131086096 131086305 -14502983 - MIR SINE MIR -10 252 20 447 302 32 0 chr10 131086562 131086688 -14502600 - L2 LINE L2 0 3313 3184 1934 135 10 10 chr10 131086865 131087162 -14502126 + AluSx SINE Alu 1 297 -15 371 203 0 0 chr10 131087202 131087271 -14502017 + L1MB5 LINE L1 6051 6119 -55 190 274 20 0 chr10 131088665 131088716 -14500572 - MIR3 SINE MIR -50 158 107 1079 305 67 65 chr10 131089983 131090675 -14498613 - MER21B LTR ERV1 -165 698 6 246 238 100 12 chr10 131090798 131090878 -14498410 - MER54A LTR ERVL -438 463 377 333 0 0 0 chr10 131090921 131090958 -14498330 + (TG)n Simple_repeat Simple_repeat 1 37 0 1061 144 50 0 chr10 131091465 131091645 -14497643 - MER5A DNA MER1_type 0 189 1 379 324 51 6 chr10 131091752 131091928 -14497360 + MIR SINE MIR 20 203 -59 194 255 20 0 chr10 131093337 131093388 -14495900 + MIR SINE MIR 100 151 -111 235 343 105 23 chr10 131093784 131093956 -14495332 - L2 LINE L2 -3 3310 3125 290 344 46 8 chr10 131094149 131094280 -14495008 - L2 LINE L2 -259 3054 2919 1850 187 126 32 chr10 131094851 131095312 -14493976 - MLT1D LTR MaLR -1 504 1 1494 118 137 24 chr10 131095563 131095818 -14493470 - AluJo SINE Alu -20 292 9 950 199 31 11 chr10 131095833 131096024 -14493264 - MER20 DNA MER1_type -24 195 1 280 229 31 62 chr10 131096039 131096135 -14493153 + L2 LINE L2 3180 3272 0 300 293 121 32 chr10 131096196 131096320 -14492968 + MER5A DNA MER1_type 16 158 -31 3318 170 20 3 chr10 131096320 131096909 -14492379 + L1MB3 LINE L1 5584 6182 -1 300 293 121 32 chr10 131096909 131096941 -14492347 + MER5A DNA MER1_type 158 186 -3 420 264 141 74 chr10 131097114 131097275 -14492013 - MER102b DNA MER1_type -1132 296 108 1395 120 23 0 chr10 131097275 131097492 -14491796 - L1PB1 LINE L1 0 6151 5930 420 264 141 74 chr10 131097492 131097599 -14491689 - MER102b DNA MER1_type -1320 108 10 380 303 32 105 chr10 131097751 131097918 -14491370 + MIR SINE MIR 9 163 -63 2240 96 0 10 chr10 131097918 131098221 -14491067 + AluSx SINE Alu 1 300 -12 195 231 0 39 chr10 131098394 131098446 -14490842 + MIR SINE MIR 159 208 -54 472 200 7 89 chr10 131100422 131100557 -14488731 - MIR SINE MIR -79 183 60 210 174 43 0 chr10 131100655 131100701 -14488587 + (GGGTG)n Simple_repeat Simple_repeat 3 50 0 339 277 111 25 chr10 131101477 131101671 -14487617 + MIR SINE MIR 6 214 -48 183 311 0 0 chr10 131102436 131102481 -14486807 + L2 LINE L2 3024 3068 -245 227 277 15 0 chr10 131102575 131102640 -14486648 + L2 LINE L2 3205 3270 -2 1175 215 46 8 chr10 131102834 131103095 -14486193 + L1MDa LINE L1 18 288 -6252 720 77 11 0 chr10 131103100 131103191 -14486097 + AluSp SINE Alu 79 170 -143 237 277 264 13 chr10 131103334 131103489 -14485799 + MIR SINE MIR 58 251 -11 1011 174 0 3 chr10 131103497 131103966 -14485322 + (CCA)n Simple_repeat Simple_repeat 1 647 0 449 215 91 0 chr10 131104190 131104311 -14484977 + L2 LINE L2 2808 2939 -375 530 218 10 0 chr10 131104343 131104444 -14484844 - MER58A DNA MER1_type 0 110 9 189 319 14 78 chr10 131104463 131104604 -14484684 + L2 LINE L2 2938 3069 -244 941 48 0 40 chr10 131104663 131104789 -14484499 + AluY SINE Alu 1 121 -190 1013 174 35 132 chr10 131104889 131105199 -14484089 - MLT1A1 LTR MaLR -83 282 3 1589 119 0 0 chr10 131105373 131105591 -14483697 + AluSq SINE Alu 5 222 -91 444 284 23 57 chr10 131106354 131106530 -14482758 + L2 LINE L2 2632 2801 -513 1777 197 51 28 chr10 131106543 131106732 -14482556 - Charlie4a DNA MER1_type -1499 462 279 2013 144 0 0 chr10 131106732 131107037 -14482251 - AluJb SINE Alu -7 305 1 1777 197 51 28 chr10 131107037 131107278 -14482010 - Charlie4a DNA MER1_type -1682 279 22 654 290 173 27 chr10 131107308 131107753 -14481535 + L2 LINE L2 2804 3313 0 769 229 12 18 chr10 131108790 131108956 -14480332 + FRAM SINE Alu 1 165 -1 515 180 9 0 chr10 131109760 131109871 -14479417 + CT-rich Low_complexity Low_complexity 2 113 0 458 270 126 0 chr10 131109875 131109986 -14479302 - FLAM_A SINE Alu -8 125 1 2157 108 3 0 chr10 131109998 131110293 -14478995 - AluSx SINE Alu -16 296 1 215 302 0 0 chr10 131110323 131110376 -14478912 - L2 LINE L2 -12 3301 3249 298 362 35 0 chr10 131110455 131110571 -14478717 + MIR SINE MIR 63 182 -80 227 195 0 0 chr10 131110595 131110636 -14478652 + (CAT)n Simple_repeat Simple_repeat 1 41 0 252 250 59 0 chr10 131111844 131111912 -14477376 - MIR3 SINE MIR -49 159 88 2415 176 21 42 chr10 131111951 131112249 -14477039 - MLT1C LTR MaLR 0 467 181 2182 99 3 10 chr10 131112249 131112552 -14476736 - AluSq SINE Alu -12 301 1 2415 176 21 42 chr10 131112552 131112730 -14476558 - MLT1C LTR MaLR -286 181 1 274 285 78 10 chr10 131112989 131113186 -14476102 - L1ME4a LINE L1 -46 6075 5819 320 187 66 44 chr10 131113504 131113595 -14475693 - L1ME4a LINE L1 -367 5754 5662 1678 166 3 10 chr10 131114246 131114548 -14474740 + AluJb SINE Alu 1 300 -12 1876 138 13 10 chr10 131114740 131115060 -14474228 - AluSx SINE Alu 0 312 1 296 230 189 0 chr10 131115320 131115438 -14473850 + MIR SINE MIR 30 166 -62 542 316 133 32 chr10 131115701 131116377 -14472911 + L2 LINE L2 2494 3260 -12 547 330 115 0 chr10 131116949 131117158 -14472130 + MIR SINE MIR 11 243 -19 198 0 0 0 chr10 131117897 131117919 -14471369 + (GA)n Simple_repeat Simple_repeat 1 22 0 636 282 44 31 chr10 131117959 131118186 -14471102 - MIR SINE MIR -10 252 23 198 103 0 0 chr10 131118693 131118722 -14470566 + (T)n Simple_repeat Simple_repeat 1 29 0 21 0 0 0 chr10 131118741 131118762 -14470526 + AT_rich Low_complexity Low_complexity 1 21 0 182 105 26 0 chr10 131118776 131118814 -14470474 + T-rich Low_complexity Low_complexity 5 43 0 2275 51 0 0 chr10 131118815 131119088 -14470200 - L1PA5 LINE L1 -3 6151 5879 626 47 24 0 chr10 131119505 131119590 -14469698 + (TTCC)n Simple_repeat Simple_repeat 4 90 0 2387 69 0 0 chr10 131119596 131119900 -14469388 - AluY SINE Alu -7 304 1 182 371 22 0 chr10 131120735 131120824 -14468464 + L2 LINE L2 3180 3270 -2 329 264 0 7 chr10 131121848 131121992 -14467296 + (TG)n Simple_repeat Simple_repeat 2 144 0 252 288 0 0 chr10 131122011 131122129 -14467159 + (TG)n Simple_repeat Simple_repeat 1 118 0 271 258 65 11 chr10 131122677 131122770 -14466518 + L2 LINE L2 3173 3270 -2 283 321 62 6 chr10 131124002 131124161 -14465127 + MIR SINE MIR 8 172 -70 221 295 107 33 chr10 131125571 131125693 -14463595 - L2 LINE L2 -3 3310 3180 2284 121 30 33 chr10 131125917 131126282 -14463006 + THE1B LTR MaLR 1 364 0 518 315 24 38 chr10 131126377 131126590 -14462698 - MIR SINE MIR -48 214 5 357 295 100 78 chr10 131126779 131127050 -14462238 - MLT1J LTR MaLR -77 434 158 228 67 0 0 chr10 131128555 131128585 -14460703 + (T)n Simple_repeat Simple_repeat 1 30 0 390 188 263 0 chr10 131128585 131128745 -14460543 + MER46C DNA MER2_type 116 317 -21 1077 159 61 72 chr10 131128753 131129030 -14460258 - L1MA9 LINE L1 -34 6278 6005 2041 120 0 0 chr10 131129030 131129313 -14459975 - AluJb SINE Alu -7 305 23 263 77 0 0 chr10 131129326 131129365 -14459923 - L1MA9 LINE L1 -340 5828 5790 1133 208 9 17 chr10 131129365 131129596 -14459692 - MER8 DNA MER2_type 0 239 11 * 1946 148 18 9 chr10 131129550 131129880 -14459408 + MER2 DNA MER2_type 11 343 -2 775 163 5 95 chr10 131129882 131130072 -14459216 - L1MA9 LINE L1 -527 5785 5613 496 215 0 74 chr10 131130072 131130132 -14459156 + Charlie1 DNA MER1_type 2637 2700 -61 1966 121 0 14 chr10 131130132 131130414 -14458874 + AluSg SINE Alu 1 278 -32 225 0 0 0 chr10 131130414 131130439 -14458849 + (CAA)n Simple_repeat Simple_repeat 3 27 0 496 215 0 74 chr10 131130439 131130512 -14458776 + Charlie1 DNA MER1_type 2698 2761 0 221 271 129 12 chr10 131133250 131133335 -14455953 - MIR SINE MIR -117 145 51 1626 210 74 8 chr10 131133357 131133723 -14455565 - MLT1B LTR MaLR 0 390 1 186 189 0 0 chr10 131133834 131133871 -14455417 - L2 LINE L2 -208 3064 3028 410 213 3 74 chr10 131134560 131134805 -14454483 + GA-rich Low_complexity Low_complexity 1 227 0 296 252 17 78 chr10 131135674 131135789 -14453499 + MIR SINE MIR 22 129 -133 303 267 38 38 chr10 131136038 131136143 -14453145 - L2 LINE L2 0 3272 3168 2393 96 0 0 chr10 131136312 131136624 -14452664 + AluSx SINE Alu 1 312 0 2256 92 7 3 chr10 131137632 131137936 -14451352 + AluSq SINE Alu 1 305 -8 203 306 272 20 chr10 131137936 131138083 -14451205 - MIR SINE MIR -9 253 70 1146 268 108 35 chr10 131138100 131138562 -14450726 - MLT1J LTR MaLR -15 496 1 252 333 10 10 chr10 131138693 131138795 -14450493 + L2 LINE L2 3170 3271 -1 218 299 10 52 chr10 131140281 131140378 -14448910 + MIR3 SINE MIR 93 185 -23 249 270 40 40 chr10 131140576 131140676 -14448612 - L2 LINE L2 0 3313 3214 692 250 59 14 chr10 131141508 131141727 -14447561 + MIR SINE MIR 39 262 0 243 378 44 0 chr10 131142254 131142434 -14446854 + L3 LINE CR1 1317 1504 -73 349 338 47 0 chr10 131143155 131143303 -14445985 - MIR3 SINE MIR -24 184 30 309 214 48 24 chr10 131143648 131143727 -14445561 - L2 LINE L2 0 3272 3192 338 214 139 28 chr10 131143727 131143846 -14445442 - MER5B DNA MER1_type -3 186 46 180 0 0 0 chr10 131146256 131146276 -14443012 + (CCCTG)n Simple_repeat Simple_repeat 2 21 0 188 129 0 0 chr10 131146553 131146584 -14442704 - MIR SINE MIR -97 111 81 818 191 51 17 chr10 131146588 131146766 -14442522 - MER20 DNA MER1_type 0 219 36 1208 269 59 20 chr10 131147130 131147559 -14441729 - MLT1K LTR MaLR -2 586 67 191 188 412 0 chr10 131147581 131147666 -14441622 + MER5C DNA MER1_type 2 121 -203 412 141 103 0 chr10 131147774 131147852 -14441436 + MER5C DNA MER1_type 239 324 0 430 171 8 138 chr10 131147859 131147924 -14441364 - MER5A DNA MER1_type -36 153 110 2649 80 40 6 chr10 131147924 131148276 -14441012 + THE1B LTR MaLR 1 364 0 430 171 8 138 chr10 131148276 131148333 -14440955 - MER5A DNA MER1_type -79 110 47 913 148 16 44 chr10 131148333 131148516 -14440772 - Tigger1 DNA MER2_type -2240 178 1 421 174 36 123 chr10 131148516 131148652 -14440636 + MER58B DNA MER1_type 215 338 -3 646 203 8 0 chr10 131148824 131148947 -14440341 - MIR3 SINE MIR -26 182 59 1948 134 192 0 chr10 131149310 131149669 -14439619 + MSTA LTR MaLR 1 428 0 2362 82 0 7 chr10 131151198 131151503 -14437785 - AluSq SINE Alu -10 303 1 236 183 0 17 chr10 131151611 131151671 -14437617 + (TG)n Simple_repeat Simple_repeat 2 60 0 252 223 27 177 chr10 131153309 131153529 -14435759 - MLT1K LTR MaLR -216 372 186 473 278 5 82 chr10 131153534 131153728 -14435560 - MLT1K LTR MaLR -341 247 69 710 307 20 5 chr10 131153779 131154007 -14435281 - MIR SINE MIR -24 238 9 332 253 13 0 chr10 131154448 131154527 -14434761 - MIR SINE MIR -59 149 70 574 343 50 43 chr10 131154729 131155149 -14434139 - MLT1K LTR MaLR 0 588 166 189 323 32 0 chr10 131155740 131155802 -14433486 + MIR SINE MIR 83 146 -62 439 200 121 50 chr10 131155932 131156072 -14433216 + L2 LINE L2 3159 3308 -5 246 310 66 49 chr10 131156535 131156761 -14432527 + L2 LINE L2 2271 2500 -814 524 237 16 10 chr10 131156915 131157041 -14432247 + MER5B DNA MER1_type 1 144 -45 2460 246 123 56 chr10 131157042 131157542 -14431746 - L1MC5 LINE L1 -36 7925 7460 2404 75 0 0 chr10 131157542 131157847 -14431441 - AluY SINE Alu -6 305 1 2460 246 123 56 chr10 131157847 131158542 -14430746 - L1MC5 LINE L1 -501 7460 6650 232 173 58 0 chr10 131158547 131158599 -14430689 - MER5B DNA MER1_type -117 61 7 432 291 81 31 chr10 131158981 131159204 -14430084 + MIR SINE MIR 15 248 -14 440 258 16 8 chr10 131159329 131159453 -14429835 - MIR3 SINE MIR -81 127 3 515 239 175 22 chr10 131159456 131159875 -14429413 - L2 LINE L2 -128 3185 2709 837 194 0 0 chr10 131159879 131160052 -14429236 - FRAM SINE Alu 0 176 4 1460 256 92 51 chr10 131160057 131160507 -14428781 - L2 LINE L2 -600 2714 2231 1939 148 13 0 chr10 131160507 131160811 -14428477 - AluJb SINE Alu -4 308 1 1460 256 92 51 chr10 131160811 131160966 -14428322 - L2 LINE L2 -1083 2231 2084 2124 120 3 0 chr10 131161631 131161930 -14427358 - AluSx SINE Alu -12 300 1 482 290 14 7 chr10 131162434 131162579 -14426709 - L2 LINE L2 -4 3309 3164 1534 173 7 42 chr10 131162581 131162888 -14426400 - AluJo SINE Alu -16 296 1 1969 142 0 0 chr10 131162959 131163254 -14426034 - AluSx SINE Alu -8 304 10 2168 209 73 10 chr10 131163273 131163755 -14425533 - MLT1F LTR MaLR -30 512 1 341 22 22 0 chr10 131164428 131164474 -14424814 + (CA)n Simple_repeat Simple_repeat 2 48 0 2290 123 27 51 chr10 131164826 131165032 -14424256 - THE1B LTR MaLR 0 364 169 2153 99 0 35 chr10 131165032 131165344 -14423944 + AluSx SINE Alu 1 301 -11 2290 123 27 51 chr10 131165344 131165510 -14423778 - THE1B LTR MaLR -195 169 1 383 226 113 0 chr10 131166026 131166150 -14423138 - LTR33 LTR ERVL -1 520 383 187 224 35 82 chr10 131166549 131166634 -14422654 - L2 LINE L2 -210 3062 2982 1983 85 0 4 chr10 131167070 131167330 -14421958 - AluSq SINE Alu -54 259 1 299 261 152 0 chr10 131168339 131168431 -14420857 + MIR SINE MIR 64 169 -93 464 183 7 0 chr10 131168488 131168625 -14420663 + (TG)n Simple_repeat Simple_repeat 2 139 0 300 194 30 0 chr10 131168810 131168877 -14420411 + MIR3 SINE MIR 88 156 -52 274 297 20 0 chr10 131169526 131169627 -14419661 + MIR3 SINE MIR 52 154 -54 200 348 209 6 chr10 131169792 131169950 -14419338 - MIR SINE MIR 0 262 73 227 252 15 96 chr10 131170048 131170183 -14419105 + MER5B DNA MER1_type 53 176 -2 * 306 255 37 61 chr10 131170081 131170197 -14419091 - MER5B DNA MER1_type -73 105 3 244 275 11 55 chr10 131170261 131170352 -14418936 + MIR3 SINE MIR 119 205 -3 201 200 20 0 chr10 131171131 131171181 -14418107 + MIR SINE MIR 91 141 -67 447 279 172 20 chr10 131172302 131172506 -14416782 - MIR SINE MIR 0 262 28 608 182 47 14 chr10 131173298 131173446 -14415842 - MER103 DNA DNA -7 159 7 788 231 16 16 chr10 131174090 131174276 -14415012 + MER20 DNA MER1_type 34 219 0 482 281 132 31 chr10 131175168 131175396 -14413892 + MIR SINE MIR 8 258 -4 568 289 45 52 chr10 131175546 131175837 -14413451 - MLT1I LTR MaLR -5 404 116 2157 113 0 3 chr10 131176276 131176586 -14412702 + AluSx SINE Alu 1 309 -3 243 172 62 0 chr10 131176601 131176665 -14412623 - L1MB7 LINE L1 -13 6171 6104 3925 173 37 46 chr10 131176781 131177012 -14412276 - L1MB7 LINE L1 -63 6121 5889 2410 42 3 0 chr10 131177012 131177300 -14411988 - AluY SINE Alu -17 294 6 3925 173 37 46 chr10 131177300 131177471 -14411817 - L1MB7 LINE L1 -295 5889 5718 1899 138 0 3 chr10 131177471 131177775 -14411513 - AluSq SINE Alu 0 303 1 3925 173 37 46 chr10 131177775 131178391 -14410897 - L1MB7 LINE L1 -466 5718 5106 219 298 65 0 chr10 131178637 131178779 -14410509 - MIR SINE MIR -18 244 93 236 214 247 34 chr10 131179518 131179607 -14409681 + MIR SINE MIR 57 164 -98 1249 254 83 16 chr10 131179620 131180053 -14409235 + MER113 DNA MER1_type? 17 478 -43 248 200 0 0 chr10 131181072 131181117 -14408171 - MIR SINE MIR -55 153 109 235 302 151 0 chr10 131181418 131181524 -14407764 - MIR SINE MIR -6 256 135 1826 145 0 44 chr10 131181582 131181722 -14407566 + AluJo SINE Alu 1 146 -166 2259 102 3 0 chr10 131181722 131182027 -14407261 + AluSp SINE Alu 1 306 -7 1826 145 0 44 chr10 131182027 131182204 -14407084 + AluJo SINE Alu 146 304 -8 2603 180 23 8 chr10 131182208 131182720 -14406568 + L1MB4 LINE L1 5661 6180 0 435 153 131 58 chr10 131185346 131185483 -14403805 - MER69 DNA AcHobo 0 2526 2380 2275 106 0 0 chr10 131185680 131185991 -14403297 - AluSx SINE Alu -1 311 1 242 263 40 0 chr10 131186853 131186929 -14402359 - MLT1K LTR MaLR 0 588 510 245 156 44 0 chr10 131187266 131187311 -14401977 - L2 LINE L2 -3 3310 3264 221 333 13 13 chr10 131187325 131187403 -14401885 + MIR SINE MIR 2 79 -183 293 336 16 16 chr10 131187509 131187631 -14401657 + MIR SINE MIR 109 230 -32 631 257 93 55 chr10 131188393 131188630 -14400658 + MIR SINE MIR 3 248 -14 2299 112 0 0 chr10 131188640 131188952 -14400336 + AluSx SINE Alu 1 312 0 221 328 108 42 chr10 131189042 131189460 -14399828 - L2 LINE L2 -222 3050 2553 245 322 113 0 chr10 131189641 131189756 -14399532 + MIR3 SINE MIR 52 179 -29 2217 108 0 10 chr10 131190420 131190734 -14398554 - AluSx SINE Alu -1 311 1 788 259 54 0 chr10 131193894 131194099 -14395189 + MIR SINE MIR 47 262 0 205 191 0 0 chr10 131194177 131194219 -14395069 + A-rich Low_complexity Low_complexity 1 42 0 1880 156 6 13 chr10 131194407 131194721 -14394567 - AluJo SINE Alu 0 312 1 204 365 10 10 chr10 131195199 131195295 -14393993 - MIR3 SINE MIR -9 199 104 307 261 153 44 chr10 131196195 131196418 -14392870 - MIR SINE MIR -11 251 6 480 280 25 44 chr10 131196629 131196810 -14392478 - MIR SINE MIR -67 141 2 255 103 0 0 chr10 131197631 131197670 -14391618 + (CA)n Simple_repeat Simple_repeat 2 40 0 451 254 27 18 chr10 131197741 131197851 -14391437 - L2 LINE L2 -2 3270 3160 205 329 0 27 chr10 131197912 131197985 -14391303 - L2 LINE L2 -42 3230 3160 204 329 27 0 chr10 131198245 131198318 -14390970 + L2 LINE L2 3197 3271 -1 289 317 12 0 chr10 131198585 131198667 -14390621 + L2 LINE L2 3231 3313 0 378 42 0 0 chr10 131199098 131199146 -14390142 + (CA)n Simple_repeat Simple_repeat 1 48 0 433 303 98 37 chr10 131199221 131199616 -14389672 - L1ME LINE L1 -319 5802 5376 455 305 37 6 chr10 131200252 131200416 -14388872 + MIR SINE MIR 28 196 -66 600 184 0 32 chr10 131200514 131200699 -14388589 + (CAT)n Simple_repeat Simple_repeat 1 179 0 334 311 10 0 chr10 131200701 131200804 -14388484 + (CACCAT)n Simple_repeat Simple_repeat 5 108 0 423 266 0 0 chr10 131200810 131200983 -14388305 + (CAT)n Simple_repeat Simple_repeat 1 173 0 512 277 3 6 chr10 131201007 131201358 -14387930 + (CAT)n Simple_repeat Simple_repeat 1 350 0 651 232 0 2 chr10 131201601 131202120 -14387168 + (CAT)n Simple_repeat Simple_repeat 1 517 0 210 282 0 0 chr10 131202163 131202266 -14387022 + (CAT)n Simple_repeat Simple_repeat 2 104 0 552 286 111 15 chr10 131202451 131202650 -14386638 + MIR SINE MIR 2 220 -42 182 264 73 55 chr10 131202784 131202894 -14386394 - MIR3 SINE MIR -90 118 7 511 306 49 7 chr10 131205102 131205246 -14384042 - MIR SINE MIR -78 184 35 323 267 9 3 chr10 131206216 131206322 -14382966 - MLT1I LTR MaLR 0 424 318 227 260 13 26 chr10 131206433 131206510 -14382778 - MLT1J2 LTR MaLR -306 144 69 1047 158 0 12 chr10 131206559 131206723 -14382565 + AluJo SINE Alu 126 287 -25 2163 130 7 0 chr10 131207059 131207367 -14381921 + AluSx SINE Alu 1 310 -2 2172 151 14 22 chr10 131208131 131208489 -14380799 - THE1A LTR MaLR 0 355 1 12165 82 9 9 chr10 131208489 131210068 -14379220 - THE1B-int LTR MaLR 0 1580 1 2256 109 42 31 chr10 131210070 131210428 -14378860 - THE1B LTR MaLR -2 362 1 932 231 174 26 chr10 131211665 131212087 -14377201 - Charlie2 DNA MER1_type 0 2862 2365 1990 121 31 0 chr10 131212087 131212377 -14376911 + AluSx SINE Alu 1 299 -13 932 231 174 26 chr10 131212377 131212413 -14376875 - Charlie2 DNA MER1_type -497 2365 2336 267 307 66 0 chr10 131212418 131212555 -14376733 - Charlie2 DNA MER1_type -2548 314 169 280 123 31 31 chr10 131214242 131214307 -14374981 - Charlie2 DNA MER1_type -434 2428 2364 1170 113 25 0 chr10 131214655 131214815 -14374473 - AluSg/x SINE Alu -14 298 135 2088 128 0 0 chr10 131214816 131215113 -14374175 - AluSq SINE Alu -7 306 10 308 277 61 11 chr10 131215165 131215280 -14374008 - MIR SINE MIR -63 145 42 190 220 136 0 chr10 131216156 131216215 -14373073 - MIR SINE MIR -64 144 78 210 91 0 0 chr10 131217090 131217123 -14372165 + (TG)n Simple_repeat Simple_repeat 1 33 0 277 109 36 0 chr10 131217159 131217214 -14372074 + (TGGA)n Simple_repeat Simple_repeat 2 58 0 234 333 185 25 chr10 131217483 131217726 -14371562 - L2 LINE L2 -1 3271 2990 427 227 33 53 chr10 131220554 131220704 -14368584 + Charlie8 DNA MER1_type 54 200 -2217 216 358 115 0 chr10 131221036 131221184 -14368104 + L2 LINE L2 3104 3268 -4 338 289 74 71 chr10 131221502 131221965 -14367323 + L2 LINE L2 2690 3176 -96 195 327 75 61 chr10 131222707 131222921 -14366367 + MIR SINE MIR 13 229 -33 582 292 15 10 chr10 131223357 131223559 -14365729 - MER63A DNA MER1_type 0 210 8 1929 117 35 0 chr10 131223790 131224072 -14365216 + AluSg SINE Alu 1 292 -18 541 226 129 19 chr10 131224150 131224305 -14364983 - MER5B DNA MER1_type -5 173 2 489 140 204 0 chr10 131224863 131224956 -14364332 - MER81 DNA DNA -1 113 2 285 293 0 24 chr10 131225435 131225558 -14363730 + MER113 DNA MER1_type? 28 147 -374 262 235 122 0 chr10 131225669 131225767 -14363521 + MER45 DNA AcHobo 1 110 -1471 296 281 108 36 chr10 131226431 131226570 -14362718 - MIR SINE MIR -81 181 33 898 256 28 0 chr10 131227773 131227984 -14361304 - MER20 DNA MER1_type -2 217 1 316 293 78 9 chr10 131228521 131228637 -14360651 + MIR SINE MIR 30 153 -109 478 326 71 0 chr10 131228819 131229003 -14360285 - MIR SINE MIR -51 211 15 305 299 84 0 chr10 131230869 131230976 -14358312 + MER5A DNA MER1_type 1 116 -73 1879 158 0 23 chr10 131231955 131232265 -14357023 - AluJo SINE Alu -9 303 1 22 35 0 0 chr10 131232274 131232303 -14356985 + AT_rich Low_complexity Low_complexity 1 29 0 204 156 0 22 chr10 131234604 131234649 -14354639 + A-rich Low_complexity Low_complexity 1 44 0 249 280 175 0 chr10 131234649 131234792 -14354496 + MIR SINE MIR 37 202 -60 263 276 115 0 chr10 131235883 131235970 -14353318 - MER5A DNA MER1_type -84 105 9 2035 148 7 0 chr10 131235998 131236303 -14352985 + AluSx SINE Alu 1 307 -5 541 257 89 34 chr10 131236419 131236598 -14352690 + MER5A DNA MER1_type 1 189 0 326 327 144 14 chr10 131236725 131236933 -14352355 + L1MC4a LINE L1 5898 6132 -1676 2270 158 58 94 chr10 131236943 131237450 -14351838 - MER92B LTR ERV1 -1 635 111 2768 78 19 6 chr10 131237450 131237809 -14351479 + THE1B LTR MaLR 1 364 0 2270 158 58 94 chr10 131237809 131237891 -14351397 - MER92B LTR ERV1 -525 111 70 1899 161 3 7 chr10 131237891 131238201 -14351087 - AluJo SINE Alu -2 310 2 2270 158 58 94 chr10 131238201 131238269 -14351019 - MER92B LTR ERV1 -566 70 1 429 368 81 58 chr10 131238279 131238660 -14350628 + L1MC4a LINE L1 6146 6535 -1273 184 264 14 56 chr10 131238764 131238836 -14350452 + MIR3 SINE MIR 125 193 -15 2301 90 0 29 chr10 131238919 131239229 -14350059 + AluSg SINE Alu 1 301 -9 383 125 16 47 chr10 131239377 131239505 -14349783 + GA-rich Low_complexity Low_complexity 2 125 0 238 256 8 8 chr10 131239515 131239632 -14349656 + (TGGA)n Simple_repeat Simple_repeat 4 120 0 752 191 6 0 chr10 131239643 131239821 -14349467 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 259 250 133 22 chr10 131241315 131241461 -14347827 - MIR SINE MIR -45 163 12 2365 115 0 0 chr10 131241601 131241914 -14347374 - AluSq SINE Alu 0 313 1 276 271 73 0 chr10 131241960 131242056 -14347232 + MER5A DNA MER1_type 7 109 -80 452 303 11 11 chr10 131243187 131243365 -14345923 + GA-rich Low_complexity Low_complexity 1 178 0 247 303 46 28 chr10 131243423 131243532 -14345756 + MER5B DNA MER1_type 5 115 -63 320 245 56 49 chr10 131243537 131243680 -14345608 + MIR SINE MIR 115 258 -4 201 312 0 13 chr10 131243769 131243846 -14345442 - MIR SINE MIR -157 105 30 390 162 6 3 chr10 131243868 131243944 -14345344 - AluJ/FLAM SINE Alu -244 58 1 668 138 163 0 chr10 131244026 131244149 -14345139 + MLT1D LTR MaLR 363 505 0 26 50 0 0 chr10 131244156 131244196 -14345092 + AT_rich Low_complexity Low_complexity 1 40 0 264 299 39 24 chr10 131244372 131244499 -14344789 + MIR SINE MIR 13 142 -66 564 227 6 52 chr10 131244507 131244679 -14344609 - L2 LINE L2 -3 3310 3147 868 215 14 7 chr10 131244699 131244887 -14344401 + L1MD2 LINE L1 5716 5907 -452 1233 184 10 0 chr10 131244887 131245088 -14344200 + AluJo SINE Alu 89 291 -21 494 228 71 56 chr10 131245088 131245496 -14343792 + L1MD2 LINE L1 5899 6357 -2 2239 115 43 0 chr10 131245597 131245946 -14343342 - THE1B LTR MaLR 0 364 1 36 0 0 0 chr10 131246104 131246140 -14343148 + AT_rich Low_complexity Low_complexity 1 36 0 334 240 58 16 chr10 131246150 131246271 -14343017 + L1MC5 LINE L1 7660 7785 -176 537 126 27 54 chr10 131246362 131246473 -14342815 + MLT2B2 LTR ERVL 1 108 -407 752 218 195 23 chr10 131246500 131246762 -14342526 - LTR16A1 LTR ERVL -4 487 147 283 262 12 24 chr10 131246765 131246849 -14342439 + MER117 DNA MER1_type 102 184 -13 219 240 0 0 chr10 131246913 131246963 -14342325 - L2 LINE L2 -2 3311 3262 631 228 114 10 chr10 131247240 131247442 -14341846 + MIR SINE MIR 6 228 -34 2213 117 3 7 chr10 131247645 131247943 -14341345 + AluSc SINE Alu 1 297 -12 1548 123 200 26 chr10 131248118 131248428 -14340860 + THE1B LTR MaLR 1 364 0 953 172 18 41 chr10 131248645 131248814 -14340474 + AluJo SINE Alu 16 180 -132 1171 206 18 29 chr10 131249594 131249871 -14339417 - L1MD1 LINE L1 -40 6202 5929 1420 135 5 10 chr10 131249877 131250104 -14339184 + AluJb SINE Alu 106 331 0 1123 198 12 8 chr10 131250110 131250357 -14338931 - L1MD1 LINE L1 -320 5922 5675 1306 184 16 55 chr10 131250357 131250666 -14338622 - LTR29 LTR ERV1 0 622 326 1714 138 0 59 chr10 131250935 131251326 -14337962 - AluJo SINE Alu 0 383 10 2074 172 42 2 chr10 131251335 131251737 -14337551 - L1MD1 LINE L1 -571 5671 5254 2262 100 7 23 chr10 131254203 131254557 -14334731 - AluSx SINE Alu 0 312 1 1894 167 3 10 chr10 131254557 131254856 -14334432 - AluJo SINE Alu -13 299 3 2405 98 0 3 chr10 131255261 131255567 -14333721 - AluSq SINE Alu -4 309 5 526 276 18 24 chr10 131255614 131255784 -14333504 - L3 LINE CR1 -8 1569 1401 1822 167 33 0 chr10 131256324 131256637 -14332651 - AluJo SINE Alu 0 322 1 1743 120 55 73 chr10 131257089 131257471 -14331817 + THE1C LTR MaLR 1 375 0 2315 128 0 0 chr10 131258225 131258531 -14330757 - AluSx SINE Alu -6 306 1 2391 193 102 26 chr10 131258633 131258917 -14330371 + MER77 LTR ERV1 30 291 -314 2141 104 3 17 chr10 131258917 131259214 -14330074 + AluY SINE Alu 1 293 -18 2391 193 102 26 chr10 131259214 131259459 -14329829 + MER77 LTR ERV1 291 599 -6 199 375 31 0 chr10 131259492 131259588 -14329700 + MER5A DNA MER1_type 91 189 0 2294 217 34 46 chr10 131259707 131259774 -14329514 + MER119 DNA MER1_type 1 67 -516 2133 116 0 0 chr10 131259774 131260109 -14329179 - AluSx SINE Alu 0 337 3 2294 217 34 46 chr10 131260109 131260629 -14328659 + MER119 DNA MER1_type 67 583 0 422 265 103 80 chr10 131260635 131260881 -14328407 + L1MC4 LINE L1 7352 7591 -451 2256 123 0 0 chr10 131260881 131261182 -14328106 + AluSx SINE Alu 1 301 -11 422 265 103 80 chr10 131261182 131261464 -14327824 + L1MC4 LINE L1 7591 8040 -2 1666 180 54 11 chr10 131261904 131262254 -14327034 + MLT1A1 LTR MaLR 1 365 0 2351 114 7 0 chr10 131262270 131262577 -14326711 + AluSx SINE Alu 2 310 -2 1072 124 9 4 chr10 131262590 131262807 -14326481 + AluSx SINE Alu 2 312 0 355 277 7 64 chr10 131262819 131262960 -14326328 + L1ME3 LINE L1 6032 6164 0 240 111 0 0 chr10 131262973 131263009 -14326279 + (A)n Simple_repeat Simple_repeat 1 36 0 2108 120 34 0 chr10 131263150 131263442 -14325846 + AluSx SINE Alu 1 302 -10 613 272 91 21 chr10 131264664 131264748 -14324540 - MIR SINE MIR 0 262 185 1349 143 55 138 chr10 131264748 131264849 -14324439 + MLT1A1 LTR MaLR 1 109 -256 2410 83 0 0 chr10 131264849 131265139 -14324149 + AluSx SINE Alu 5 294 -18 1349 143 55 138 chr10 131265139 131265435 -14323853 + MLT1A1 LTR MaLR 109 365 0 613 272 91 21 chr10 131265435 131265593 -14323695 - MIR SINE MIR -77 185 3 2011 149 3 0 chr10 131265630 131265925 -14323363 + AluSx SINE Alu 1 296 -16 224 250 76 22 chr10 131266801 131266893 -14322395 + MIR SINE MIR 33 129 -79 2388 113 0 0 chr10 131266974 131267283 -14322005 - AluSx SINE Alu -3 309 1 188 320 13 0 chr10 131267393 131267468 -14321820 - L2 LINE L2 -269 3044 2969 376 305 86 47 chr10 131267571 131267722 -14321566 - L2 LINE L2 -474 2840 2696 1669 133 0 94 chr10 131267722 131267872 -14321416 + AluJo SINE Alu 1 105 -197 471 35 0 0 chr10 131267872 131267929 -14321359 + (CA)n Simple_repeat Simple_repeat 2 58 0 1669 133 0 94 chr10 131267929 131268109 -14321179 + AluJo SINE Alu 105 300 -2 376 305 86 47 chr10 131268109 131268318 -14320970 - L2 LINE L2 -618 2696 2466 267 339 18 18 chr10 131269239 131269351 -14319937 + L2 LINE L2 3161 3272 0 289 330 79 9 chr10 131269413 131269586 -14319702 + MIR3 SINE MIR 3 183 -60 2181 102 7 0 chr10 131270057 131270342 -14318946 - AluSx SINE Alu -19 293 7 2274 181 68 21 chr10 131270357 131270870 -14318418 + MER74A LTR ERVL 22 558 0 214 340 0 43 chr10 131270871 131270965 -14318323 + L2 LINE L2 3155 3244 -28 292 105 53 0 chr10 131270967 131271024 -14318264 + CT-rich Low_complexity Low_complexity 1 60 0 180 158 0 0 chr10 131271015 131271053 -14318235 + C-rich Low_complexity Low_complexity 1 38 0 * 1973 128 53 0 chr10 131271059 131271340 -14317948 - AluSx SINE Alu -16 296 1 2275 108 0 0 chr10 131271994 131272289 -14316999 + AluSx SINE Alu 1 295 -17 2300 105 0 0 chr10 131272291 131272587 -14316701 + AluSg SINE Alu 1 296 -14 338 253 0 12 chr10 131272988 131273071 -14316217 - MER94 DNA DNA -51 83 2 2389 116 0 0 chr10 131275590 131275901 -14313387 + AluSx SINE Alu 2 312 0 1467 133 148 4 chr10 131277242 131277506 -14311782 + AluJb SINE Alu 1 302 0 1653 153 49 7 chr10 131277809 131278117 -14311171 - MLT1B LTR MaLR -69 321 1 2168 111 47 0 chr10 131278323 131278621 -14310667 - AluSx SINE Alu 0 312 1 871 251 84 60 chr10 131278690 131279141 -14310147 + MLT1C LTR MaLR 6 467 0 207 0 0 0 chr10 131279465 131279488 -14309800 + (T)n Simple_repeat Simple_repeat 1 23 0 2319 107 0 0 chr10 131280838 131281137 -14308151 - AluSc SINE Alu -9 300 2 2044 120 0 0 chr10 131281719 131281993 -14307295 - AluSx SINE Alu -8 304 31 2286 104 0 7 chr10 131282141 131282438 -14306850 - AluSq SINE Alu -18 295 1 1646 185 0 23 chr10 131282950 131283252 -14306036 + AluJb SINE Alu 1 295 -17 573 101 0 0 chr10 131283255 131283334 -14305954 + AluS SINE Alu 2 80 -232 290 267 23 23 chr10 131283344 131283430 -14305858 - MIR SINE MIR -105 157 72 1905 153 3 7 chr10 131283445 131283733 -14305555 + AluJo SINE Alu 1 287 -25 214 288 102 8 chr10 131283882 131284000 -14305288 - MIR3 SINE MIR -43 165 37 211 213 21 0 chr10 131284067 131284114 -14305174 + G-rich Low_complexity Low_complexity 2 49 0 356 293 175 24 chr10 131284455 131284786 -14304502 + L2 LINE L2 2892 3272 0 2467 86 0 0 chr10 131284854 131285155 -14304133 - AluY SINE Alu -10 301 1 1995 137 7 0 chr10 131285485 131285763 -14303525 + AluSx SINE Alu 12 291 -21 2178 116 0 0 chr10 131286668 131286961 -14302327 - AluSx SINE Alu -19 293 1 429 315 56 42 chr10 131287051 131287267 -14302021 + L1ME4a LINE L1 5902 6120 -1 1845 179 3 6 chr10 131287289 131287602 -14301686 + AluJb SINE Alu 1 312 0 364 301 98 62 chr10 131287953 131288146 -14301142 + MIR SINE MIR 10 209 -53 2336 88 0 3 chr10 131288186 131288480 -14300808 + AluSx SINE Alu 1 293 -19 2276 123 0 0 chr10 131288488 131288796 -14300492 + AluSx SINE Alu 1 308 -4 257 246 0 15 chr10 131288868 131288933 -14300355 + MER5B DNA MER1_type 5 68 -110 2303 113 0 0 chr10 131290080 131290381 -14298907 + AluSx SINE Alu 1 301 -11 188 321 0 0 chr10 131290509 131290565 -14298723 - MIR SINE MIR -62 146 91 321 135 0 0 chr10 131291777 131291829 -14297459 + (CA)n Simple_repeat Simple_repeat 1 52 0 2343 85 7 3 chr10 131292823 131293116 -14296172 - AluSx SINE Alu -18 294 1 282 224 0 106 chr10 131293377 131293556 -14295732 + (TCTCTG)n Simple_repeat Simple_repeat 3 162 0 315 242 0 100 chr10 131293568 131293914 -14295374 + (TCTCTG)n Simple_repeat Simple_repeat 1 311 0 353 284 135 20 chr10 131294227 131294375 -14294913 + HAL1 LINE L1 1162 1326 -1181 303 277 53 78 chr10 131294534 131294740 -14294548 + HAL1 LINE L1 362 562 -1945 374 267 116 46 chr10 131294854 131295199 -14294089 + HAL1 LINE L1 1074 1442 -1065 605 160 75 4 chr10 131295199 131295396 -14293892 + AluJb SINE Alu 3 302 -10 2259 114 10 0 chr10 131295398 131295696 -14293592 + AluSq SINE Alu 2 302 -11 571 58 0 23 chr10 131295696 131295782 -14293506 + (GGAA)n Simple_repeat Simple_repeat 1 84 0 526 279 69 40 chr10 131295796 131296072 -14293216 + HAL1 LINE L1 1427 1710 -797 236 220 17 17 chr10 131296120 131296179 -14293109 + HAL1 LINE L1 1705 1763 -744 180 329 126 12 chr10 131296183 131296350 -14292938 - L2 LINE L2 0 3313 3128 2429 86 3 3 chr10 131296552 131296856 -14292432 + AluSx SINE Alu 1 304 -8 1543 139 139 44 chr10 131296995 131297268 -14292020 - AluJb SINE Alu -13 299 1 2151 141 0 0 chr10 131297498 131297795 -14291493 + AluSx SINE Alu 1 297 -15 559 250 27 0 chr10 131299116 131299264 -14290024 + Charlie8 DNA MER1_type 7 158 -2259 21 36 0 0 chr10 131299912 131299940 -14289348 + AT_rich Low_complexity Low_complexity 1 28 0 603 206 29 15 chr10 131301651 131301787 -14287501 - MIR SINE MIR -30 232 95 209 324 174 23 chr10 131301781 131302040 -14287248 + L2 LINE L2 2940 3237 -35 * 1382 141 5 116 chr10 131302076 131302145 -14287143 + MER96B DNA MER1_type? 43 118 -299 2155 124 13 0 chr10 131302145 131302444 -14286844 - AluSx SINE Alu -7 305 3 1382 141 5 116 chr10 131302444 131302692 -14286596 + MER96B DNA MER1_type? 118 392 -25 1881 121 95 0 chr10 131302692 131302956 -14286332 + AluSx SINE Alu 1 289 -23 252 0 0 0 chr10 131302960 131302988 -14286300 + (TAAA)n Simple_repeat Simple_repeat 3 30 0 1382 141 5 116 chr10 131302988 131303034 -14286254 + MER96B DNA MER1_type? 322 371 -46 2137 109 3 3 chr10 131303282 131303593 -14285695 + AluSq SINE Alu 1 311 0 248 359 22 0 chr10 131303662 131303754 -14285534 + MIR SINE MIR 158 251 -11 2192 123 0 0 chr10 131303922 131304223 -14285065 + AluSc SINE Alu 1 301 -8 873 176 0 0 chr10 131304517 131304653 -14284635 + AluJo SINE Alu 1 136 -176 1921 156 7 0 chr10 131304653 131304935 -14284353 + AluJo SINE Alu 1 284 -28 281 325 12 0 chr10 131305749 131305829 -14283459 - MIR SINE MIR -55 153 73 2105 130 0 25 chr10 131306547 131306679 -14282609 + AluJb SINE Alu 5 139 -173 2042 116 32 3 chr10 131306679 131307001 -14282287 + AluSg SINE Alu 1 310 0 2105 130 0 25 chr10 131307001 131307184 -14282104 + AluJb SINE Alu 139 312 0 2049 97 83 14 chr10 131307187 131307476 -14281812 + AluSg SINE Alu 1 309 -1 201 159 0 0 chr10 131307510 131307554 -14281734 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 2051 134 0 3 chr10 131308084 131308423 -14280865 + AluSx SINE Alu 1 338 0 2416 100 0 0 chr10 131308423 131308723 -14280565 + AluSg SINE Alu 1 300 -10 2413 90 0 3 chr10 131308727 131309028 -14280260 + AluSc SINE Alu 6 305 -4 708 240 93 5 chr10 131309040 131309244 -14280044 - MIR SINE MIR -26 236 15 2351 77 37 0 chr10 131311227 131311526 -14277762 + AluSp SINE Alu 1 310 -3 537 263 39 11 chr10 131311537 131311716 -14277572 - MIR SINE MIR -48 214 31 420 147 0 0 chr10 131312236 131312311 -14276977 + (GGGA)n Simple_repeat Simple_repeat 4 78 0 268 287 134 19 chr10 131313661 131313818 -14275470 - MER5A DNA MER1_type -8 181 7 475 164 9 55 chr10 131313994 131314104 -14275184 - MER69 DNA AcHobo 0 2526 2422 293 68 23 0 chr10 131314330 131314374 -14274914 + (TTCC)n Simple_repeat Simple_repeat 1 45 0 1891 157 20 3 chr10 131314374 131314667 -14274621 - AluJb SINE Alu -14 298 1 285 289 193 0 chr10 131314928 131315042 -14274246 - MIR SINE MIR -3 259 124 450 231 81 50 chr10 131315070 131315230 -14274058 + MER63 DNA MER1_type 672 1060 0 351 245 128 0 chr10 131315230 131315324 -14273964 - MIR SINE MIR -136 126 21 275 231 90 26 chr10 131315617 131315695 -14273593 - MIR SINE MIR -170 92 10 190 327 39 10 chr10 131315798 131315902 -14273386 + MIR SINE MIR 27 133 -129 345 131 0 0 chr10 131316806 131316867 -14272421 + (GGA)n Simple_repeat Simple_repeat 1 61 0 22 0 0 0 chr10 131317632 131317654 -14271634 + GC_rich Low_complexity Low_complexity 1 22 0 1871 101 0 0 chr10 131319232 131319469 -14269819 + AluSq SINE Alu 1 237 -76 599 120 0 0 chr10 131319470 131319562 -14269726 + AluSg/x SINE Alu 209 300 -12 2428 87 3 0 chr10 131319562 131319862 -14269426 + AluSx SINE Alu 1 301 -11 405 39 0 0 chr10 131320034 131320085 -14269203 + (CA)n Simple_repeat Simple_repeat 1 51 0 515 138 0 37 chr10 131320177 131320286 -14269002 - FLAM_A SINE Alu -2 140 36 186 291 36 0 chr10 131320609 131320664 -14268624 + MIR SINE MIR 32 88 -120 747 263 108 120 chr10 131320955 131321556 -14267732 + L1ME4a LINE L1 5528 6121 0 1092 171 6 0 chr10 131321634 131321810 -14267478 - AluJo SINE Alu -11 301 125 322 92 15 15 chr10 131321819 131321884 -14267404 + (TTTA)n Simple_repeat Simple_repeat 2 66 0 736 124 35 0 chr10 131321906 131322019 -14267269 - AluSg SINE Alu -192 118 2 836 190 43 5 chr10 131322021 131322205 -14267083 - L1MC1 LINE L1 -5 6328 6138 2225 146 12 39 chr10 131322254 131322664 -14266624 - LTR9 LTR ERV1 -82 530 132 1398 96 0 0 chr10 131322664 131322842 -14266446 + AluSp SINE Alu 136 313 0 387 60 0 0 chr10 131322842 131322892 -14266396 + (GGAA)n Simple_repeat Simple_repeat 1 50 0 822 269 198 52 chr10 131322892 131323922 -14265366 + HAL1 LINE L1 110 1325 -1182 1031 175 6 0 chr10 131323922 131324093 -14265195 + FAM SINE Alu 4 175 0 822 269 198 52 chr10 131324093 131324204 -14265084 + HAL1 LINE L1 1325 1418 -1089 2076 192 82 62 chr10 131324237 131324706 -14264582 + L1ME1 LINE L1 5529 6174 -160 2081 111 6 57 chr10 131324706 131324882 -14264406 - AluSx SINE Alu -13 299 144 2438 90 3 0 chr10 131324882 131325183 -14264105 - AluSx SINE Alu -10 302 1 2081 111 6 57 chr10 131325183 131325321 -14263967 - AluSx SINE Alu -168 144 1 2076 192 82 62 chr10 131325321 131325485 -14263803 + L1ME1 LINE L1 6174 6333 -1 1501 148 79 20 chr10 131325494 131325797 -14263491 + L1MB7 LINE L1 5539 5859 -325 318 352 63 19 chr10 131325835 131325994 -14263294 - MER34 LTR ERV1 -29 513 348 596 307 24 16 chr10 131326146 131326397 -14262891 - MER34 LTR ERV1 -278 264 12 1243 231 22 13 chr10 131326407 131326723 -14262565 + L1MB8 LINE L1 5854 6172 -6 361 186 144 10 chr10 131326726 131326823 -14262465 + HAL1 LINE L1 1447 1556 -951 1382 160 60 52 chr10 131326851 131327119 -14262169 + AluJb SINE Alu 24 293 -19 2235 133 13 0 chr10 131327321 131327623 -14261665 + AluSx SINE Alu 3 308 -4 255 157 0 0 chr10 131327623 131327674 -14261614 + GA-rich Low_complexity Low_complexity 1 51 0 457 228 17 86 chr10 131327674 131327818 -14261470 + HAL1 LINE L1 2292 2444 -63 281 26 26 0 chr10 131327818 131327856 -14261432 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2091 106 0 18 chr10 131327858 131328142 -14261146 - AluSg SINE Alu -31 279 1 457 228 17 86 chr10 131328142 131328226 -14261062 + HAL1 LINE L1 2445 2507 0 190 304 0 0 chr10 131328305 131328351 -14260937 - MIR SINE MIR 0 262 217 1649 187 6 22 chr10 131328351 131328667 -14260621 - AluJo SINE Alu -1 311 1 2590 50 0 3 chr10 131328997 131329294 -14259994 - AluY SINE Alu -15 296 1 2089 107 61 0 chr10 131329354 131329634 -14259654 - AluSp SINE Alu -16 297 1 571 138 69 100 chr10 131329639 131329715 -14259573 - FLAM_C SINE Alu -185 127 55 2328 106 0 7 chr10 131329715 131330017 -14259271 - AluSx SINE Alu -12 300 1 571 138 69 100 chr10 131330017 131330070 -14259218 - FLAM_C SINE Alu -257 55 2 2045 148 0 19 chr10 131330550 131330868 -14258420 + AluJb SINE Alu 1 312 0 1136 88 0 0 chr10 131331445 131331582 -14257706 + AluSq/x SINE Alu 1 137 -175 2171 118 0 3 chr10 131331588 131331885 -14257403 + AluSx SINE Alu 8 303 -9 2253 110 23 0 chr10 131331953 131332253 -14257035 + AluSg SINE Alu 1 307 -3 845 182 0 19 chr10 131332559 131332718 -14256570 - MIR SINE MIR -100 162 7 442 158 0 0 chr10 131332722 131332804 -14256484 + AluS SINE Alu 225 306 -4 253 287 88 22 chr10 131334597 131334733 -14254555 - MLT1J2 LTR MaLR -259 252 70 185 152 349 30 chr10 131334859 131334925 -14254363 - L2 LINE L2 -5 3267 3181 215 100 0 25 chr10 131336124 131336164 -14253124 + (TC)n Simple_repeat Simple_repeat 2 40 0 262 325 16 8 chr10 131336345 131336468 -14252820 + C-rich Low_complexity Low_complexity 3 126 0 415 308 139 0 chr10 131337125 131337297 -14251991 + MER117 DNA MER1_type 2 197 0 229 302 128 20 chr10 131338345 131338494 -14250794 - MIR SINE MIR -28 234 70 196 333 12 12 chr10 131338579 131338663 -14250625 - L3 LINE CR1 -179 1398 1315 181 233 0 23 chr10 131340008 131340051 -14249237 - MIR SINE MIR -109 153 112 805 272 62 11 chr10 131340591 131340863 -14248425 - HAL1 LINE L1 -961 1546 1261 674 152 14 36 chr10 131340865 131341003 -14248285 - AluSg/x SINE Alu 0 310 176 469 214 207 0 chr10 131341314 131341459 -14247829 - MER96 DNA MER1_type 0 175 1 777 272 43 8 chr10 131341459 131341694 -14247594 - MIR SINE MIR -8 254 12 485 251 18 42 chr10 131342336 131342503 -14246785 + MER103 DNA DNA 2 164 -2 206 299 75 37 chr10 131342950 131343084 -14246204 + L2 LINE L2 3129 3267 -5 303 304 205 0 chr10 131343118 131343279 -14246009 - MIR SINE MIR -37 225 32 1545 167 54 11 chr10 131343288 131343606 -14245682 - MER33 DNA MER1_type -9 315 1 1880 113 19 47 chr10 131345535 131345854 -14243434 - MLT1B LTR MaLR -80 310 1 272 220 70 20 chr10 131345890 131345990 -14243298 + L1MDa LINE L1 1665 1769 -4771 2172 121 0 34 chr10 131346045 131346367 -14242921 - AluSx SINE Alu -1 311 1 1712 182 47 7 chr10 131346370 131346667 -14242621 - AluJo SINE Alu 0 312 4 308 108 4 0 chr10 131346717 131346811 -14242477 - Alu SINE Alu 0 325 242 840 286 62 67 chr10 131347841 131348261 -14241027 - LTR16B LTR ERVL -44 420 3 277 271 132 7 chr10 131348320 131348464 -14240824 - L1M4 LINE L1 -1339 4807 4646 2118 110 0 40 chr10 131348722 131349023 -14240265 - AluSx SINE Alu -23 289 1 2172 98 37 7 chr10 131349065 131349361 -14239927 - AluSg SINE Alu -5 305 1 2267 70 7 23 chr10 131350040 131350340 -14238948 + AluY SINE Alu 1 295 -16 493 309 6 0 chr10 131350343 131350508 -14238780 - HAL1 LINE L1 -456 2051 1886 2359 103 0 3 chr10 131350521 131350832 -14238456 + AluY SINE Alu 2 311 0 2947 133 13 6 chr10 131350838 131351313 -14237975 - L1MB3 LINE L1 -11 6172 5695 301 192 0 0 chr10 131351317 131351369 -14237919 - MLT1A1 LTR MaLR 0 374 323 1366 193 42 46 chr10 131351401 131351707 -14237581 - AluJo SINE Alu -7 305 1 607 167 26 9 chr10 131351707 131351821 -14237467 - MLT1A1 LTR MaLR -42 323 208 1514 174 4 35 chr10 131351822 131351945 -14237343 - AluJo SINE Alu -56 256 144 2314 107 0 0 chr10 131351945 131352244 -14237044 - AluSx SINE Alu -9 303 5 1514 174 4 35 chr10 131352244 131352378 -14236910 - AluJo SINE Alu -168 144 7 921 144 39 0 chr10 131352382 131352535 -14236753 - MLT1A1 LTR MaLR -206 159 1 1453 176 0 12 chr10 131352535 131352785 -14236503 - L1MB3 LINE L1 -475 5696 5450 1602 110 5 0 chr10 131352804 131353022 -14236266 - AluSg/x SINE Alu -7 303 85 1974 115 0 25 chr10 131353184 131353470 -14235818 - AluSc SINE Alu -30 279 1 2408 87 3 0 chr10 131353470 131353767 -14235521 - AluSc SINE Alu -10 299 1 1436 122 24 0 chr10 131353851 131354056 -14235232 + AluSg/x SINE Alu 86 295 -17 2063 102 14 20 chr10 131354067 131354360 -14234928 + AluSx SINE Alu 2 292 -20 32 0 0 0 chr10 131354963 131354995 -14234293 + AT_rich Low_complexity Low_complexity 1 32 0 2019 150 0 0 chr10 131355331 131355618 -14233670 + AluSx SINE Alu 1 287 -25 186 43 0 0 chr10 131356300 131356323 -14232965 + (A)n Simple_repeat Simple_repeat 1 23 0 240 59 0 0 chr10 131357531 131357565 -14231723 + (A)n Simple_repeat Simple_repeat 1 34 0 21 0 0 0 chr10 131358500 131358521 -14230767 + AT_rich Low_complexity Low_complexity 1 21 0 186 43 0 0 chr10 131359142 131359165 -14230123 + (A)n Simple_repeat Simple_repeat 1 23 0 752 235 260 11 chr10 131359898 131360264 -14229024 - L2 LINE L2 -990 2324 1868 2423 87 0 7 chr10 131360282 131360591 -14228697 + AluSx SINE Alu 1 307 -5 826 116 14 48 chr10 131360680 131360827 -14228461 + AluSc SINE Alu 168 309 0 330 125 21 0 chr10 131360846 131360894 -14228394 + Tigger5 DNA MER2_type 29 77 -2246 239 250 109 0 chr10 131360894 131360958 -14228330 - Tigger5 DNA MER2_type -2 2321 2251 265 179 0 119 chr10 131360958 131361042 -14228246 + Tigger5 DNA MER2_type 2250 2323 0 254 111 0 0 chr10 131361047 131361083 -14228205 + LTR33A LTR ERVL 487 522 -1 209 303 0 0 chr10 131361091 131361157 -14228131 - MIR SINE MIR -112 150 85 2167 140 0 3 chr10 131362213 131362527 -14226761 - AluSq SINE Alu 0 313 1 180 67 22 44 chr10 131362593 131362638 -14226650 + (TA)n Simple_repeat Simple_repeat 2 45 0 1718 157 31 11 chr10 131362819 131363105 -14226183 - AluJo SINE Alu -18 294 3 2120 123 10 17 chr10 131363138 131363439 -14225849 - AluSx SINE Alu -13 299 1 688 184 16 16 chr10 131363448 131363573 -14225715 - FLAM_C SINE Alu -17 126 2 400 252 80 77 chr10 131363594 131363919 -14225369 + L1MEd LINE L1 904 1229 -4890 2382 71 0 7 chr10 131365916 131366212 -14223076 + AluSc SINE Alu 1 294 -15 190 256 0 0 chr10 131366804 131366847 -14222441 + L2 LINE L2 3206 3248 -24 1045 124 92 0 chr10 131367487 131367640 -14221648 - AluSx SINE Alu -143 169 3 2178 110 3 13 chr10 131367939 131368248 -14221040 + AluSq SINE Alu 1 306 -7 1517 197 8 0 chr10 131368301 131368555 -14220733 + AluJo SINE Alu 1 256 -56 1752 174 7 3 chr10 131369035 131369333 -14219955 - AluJo SINE Alu -13 299 1 2095 148 0 0 chr10 131369548 131369846 -14219442 - AluSx SINE Alu -14 298 1 2424 100 6 3 chr10 131369848 131370159 -14219129 - AluSx SINE Alu 0 312 1 2025 143 0 3 chr10 131370163 131370464 -14218824 - AluSx SINE Alu -12 300 1 318 295 86 0 chr10 131370645 131370750 -14218538 - L2 LINE L2 0 3313 3200 22 0 0 0 chr10 131370772 131370794 -14218494 + AT_rich Low_complexity Low_complexity 1 22 0 2519 66 3 0 chr10 131372177 131372479 -14216809 - AluY SINE Alu -8 303 1 777 211 30 24 chr10 131372770 131372936 -14216352 - FRAM SINE Alu -10 166 1 2224 99 0 0 chr10 131372958 131373271 -14216017 + AluSq SINE Alu 1 313 0 982 167 0 0 chr10 131373832 131373982 -14215306 - FRAM SINE Alu -31 145 1 297 0 0 0 chr10 131373982 131374015 -14215273 + (TTTTA)n Simple_repeat Simple_repeat 3 35 0 185 0 40 0 chr10 131374016 131374041 -14215247 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 9308 35 9 131 chr10 131374041 131375456 -14213832 - SVA Other Other -23 1363 122 934 65 0 0 chr10 131376720 131376827 -14212461 + AluSq/x SINE Alu 30 136 -176 2497 85 0 0 chr10 131376828 131377134 -14212154 + AluSg SINE Alu 1 306 -4 1248 162 10 10 chr10 131377317 131377514 -14211774 + AluJo SINE Alu 86 282 -30 1824 140 0 4 chr10 131377959 131378250 -14211038 + AluSx SINE Alu 22 311 0 21 89 0 0 chr10 131379584 131379640 -14209648 + AT_rich Low_complexity Low_complexity 1 56 0 21 36 0 0 chr10 131379829 131379857 -14209431 + AT_rich Low_complexity Low_complexity 1 28 0 26 30 0 0 chr10 131381106 131381139 -14208149 + AT_rich Low_complexity Low_complexity 1 33 0 2283 92 0 7 chr10 131383426 131383718 -14205570 + AluSx SINE Alu 1 290 -22 2047 104 0 62 chr10 131383720 131384028 -14205260 + AluSc SINE Alu 15 303 -6 1634 137 29 76 chr10 131384036 131384351 -14204937 + AluJb SINE Alu 1 300 -12 1625 282 113 32 chr10 131384552 131385888 -14203400 + L2 LINE L2 1763 3237 -35 323 316 49 101 chr10 131386193 131386500 -14202788 + L2 LINE L2 2947 3237 -35 2393 115 0 0 chr10 131387213 131387525 -14201763 - AluSq SINE Alu -1 312 1 2387 87 0 0 chr10 131388098 131388387 -14200901 - AluSx SINE Alu -23 289 1 2285 93 0 0 chr10 131389311 131389705 -14199583 + AluSg SINE Alu 1 394 0 23 92 0 0 chr10 131389827 131389892 -14199396 + AT_rich Low_complexity Low_complexity 1 65 0 2365 84 0 10 chr10 131390005 131390304 -14198984 + AluSq SINE Alu 3 298 -15 228 35 0 0 chr10 131391645 131391674 -14197614 + (CA)n Simple_repeat Simple_repeat 1 29 0 1836 145 194 30 chr10 131394104 131394538 -14194750 - MLT1D LTR MaLR 0 505 1 3547 147 76 102 chr10 131394863 131395214 -14194074 + L1MC2 LINE L1 5457 5816 -528 2116 89 98 9 chr10 131395214 131395540 -14193748 + THE1A LTR MaLR 1 355 0 3547 147 76 102 chr10 131395540 131396088 -14193200 + L1MC2 LINE L1 5816 6332 -12 683 246 92 117 chr10 131396109 131396321 -14192967 - L1ME3A LINE L1 -266 5904 5688 2242 100 3 0 chr10 131396321 131396632 -14192656 - AluSx SINE Alu 0 312 1 683 246 92 117 chr10 131396632 131397171 -14192117 - L1ME3A LINE L1 -482 5688 5171 2065 100 31 0 chr10 131397171 131397461 -14191827 + AluSx SINE Alu 2 300 -12 683 246 92 117 chr10 131397461 131397563 -14191725 - L1ME3A LINE L1 -999 5171 5068 24 0 0 0 chr10 131397642 131397666 -14191622 + AT_rich Low_complexity Low_complexity 1 24 0 1615 119 71 58 chr10 131397675 131397969 -14191319 + AluSx SINE Alu 1 298 -14 284 239 64 28 chr10 131397974 131398083 -14191205 - L1P LINE L1 -1131 5015 4903 2125 108 0 0 chr10 131398296 131398593 -14190695 + AluSx SINE Alu 14 310 -2 389 291 148 13 chr10 131398727 131398964 -14190324 - MARNA DNA Mariner -43 543 275 2044 134 3 0 chr10 131399089 131399387 -14189901 + AluSx SINE Alu 1 299 -13 1019 127 0 19 chr10 131399990 131400148 -14189140 + FRAM SINE Alu 12 166 -10 240 292 0 0 chr10 131400407 131400503 -14188785 + (TA)n Simple_repeat Simple_repeat 2 97 0 1759 112 93 0 chr10 131400619 131400888 -14188400 + AluSx SINE Alu 1 294 -18 2124 108 0 7 chr10 131401014 131401319 -14187969 + AluSx SINE Alu 8 310 -2 1628 156 0 68 chr10 131401786 131401939 -14187349 + AluJo SINE Alu 1 122 -190 2157 106 3 7 chr10 131401939 131402240 -14187048 + AluSx SINE Alu 1 300 -12 1628 156 0 68 chr10 131402240 131402407 -14186881 + AluJo SINE Alu 122 299 -13 182 247 45 67 chr10 131402472 131402561 -14186727 + L3 LINE CR1 1386 1472 -105 472 339 82 38 chr10 131402765 131403057 -14186231 - L2 LINE L2 0 3272 2968 2272 103 0 6 chr10 131403232 131403544 -14185744 - AluSx SINE Alu -2 310 1 487 231 19 0 chr10 131403548 131403652 -14185636 - L2 LINE L2 -568 2746 2641 945 202 40 21 chr10 131403763 131404005 -14185283 - MIR SINE MIR -14 248 10 1754 144 43 3 chr10 131404064 131404363 -14184925 + AluJo SINE Alu 1 311 -1 849 270 15 30 chr10 131404498 131404761 -14184527 - MIR SINE MIR 0 262 4 2017 126 10 0 chr10 131404855 131405156 -14184132 + AluSx SINE Alu 1 304 -8 1531 167 64 3 chr10 131405229 131405511 -14183777 - AluJo SINE Alu -13 299 1 237 239 14 28 chr10 131406215 131406286 -14183002 + L2 LINE L2 2947 3016 -256 2102 133 3 0 chr10 131406445 131406754 -14182534 - AluSx SINE Alu -2 310 1 1495 186 80 15 chr10 131407265 131407717 -14181571 + MLT1F LTR MaLR 1 567 0 273 57 0 0 chr10 131407879 131407914 -14181374 + (TC)n Simple_repeat Simple_repeat 2 36 0 325 227 31 91 chr10 131407927 131408126 -14181162 + L1MCa LINE L1 1942 2065 -4361 27 0 0 0 chr10 131408126 131408153 -14181135 + AT_rich Low_complexity Low_complexity 1 27 0 329 260 32 65 chr10 131408153 131408307 -14180981 + L1MCa LINE L1 1917 2065 -4361 * 338 216 37 104 chr10 131408287 131408421 -14180867 + L1MCa LINE L1 1941 2065 -4361 319 283 22 22 chr10 131408358 131408450 -14180838 - L1MC4 LINE L1 -1339 6703 6612 * 1873 127 3 7 chr10 131408528 131408839 -14180449 - AluSx SINE Alu 0 310 1 2294 99 0 0 chr10 131408850 131409154 -14180134 - AluSg1 SINE Alu -5 304 1 333 287 125 7 chr10 131409345 131409481 -14179807 - L2 LINE L2 -1 3312 3161 2062 81 6 69 chr10 131409614 131409934 -14179354 - AluSq SINE Alu -13 300 1 199 271 0 0 chr10 131409938 131409986 -14179302 - MIR SINE MIR -115 147 100 26 0 0 0 chr10 131410094 131410120 -14179168 + AT_rich Low_complexity Low_complexity 1 26 0 2074 126 13 0 chr10 131410304 131410606 -14178682 - AluSx SINE Alu -6 306 1 504 166 317 14 chr10 131410793 131410938 -14178350 - MER5A DNA MER1_type 0 189 1 2387 70 3 0 chr10 131411312 131411613 -14177675 + AluSx SINE Alu 1 302 -10 2264 87 3 0 chr10 131413403 131413703 -14175585 + AluSx SINE Alu 1 301 -11 576 223 78 36 chr10 131413986 131414152 -14175136 + MIR SINE MIR 79 251 -11 269 395 127 29 chr10 131414825 131415139 -14174149 - L2 LINE L2 -13 3259 2915 372 103 0 0 chr10 131415141 131415199 -14174089 + (TG)n Simple_repeat Simple_repeat 2 59 0 1420 196 7 29 chr10 131415713 131416019 -14173269 - AluJo SINE Alu -9 303 5 2582 105 6 0 chr10 131416049 131416402 -14172886 - THE1A LTR MaLR 0 355 1 1597 210 3 0 chr10 131417007 131417312 -14171976 - AluJb SINE Alu -2 310 5 31 26 0 0 chr10 131417416 131417454 -14171834 + AT_rich Low_complexity Low_complexity 1 38 0 641 276 19 0 chr10 131417518 131417674 -14171614 + MIR SINE MIR 102 260 -2 355 235 92 21 chr10 131417760 131417915 -14171373 - L1ME4a LINE L1 -223 5898 5762 2110 85 0 4 chr10 131417944 131418261 -14171027 + AluSc SINE Alu 1 316 0 319 248 132 31 chr10 131418942 131419071 -14170217 - L2 LINE L2 -21 3292 3151 919 139 22 44 chr10 131419081 131419261 -14170027 - THE1C LTR MaLR 0 375 200 1053 126 0 0 chr10 131419267 131419467 -14169821 - AluSp SINE Alu 0 333 134 1073 135 51 17 chr10 131419469 131419647 -14169641 - THE1C LTR MaLR -191 184 1 898 287 120 15 chr10 131419724 131420149 -14169139 - L2 LINE L2 -234 3038 2562 1081 103 0 0 chr10 131420621 131420776 -14168512 - AluSg/x SINE Alu -12 300 146 726 66 0 0 chr10 131420880 131420971 -14168317 + AluY SINE Alu 3 93 -225 219 200 0 20 chr10 131421139 131421189 -14168099 + A-rich Low_complexity Low_complexity 6 54 0 665 241 84 118 chr10 131421683 131422148 -14167140 + MLT1J2 LTR MaLR 1 449 -1 698 225 56 0 chr10 131423401 131423543 -14165745 + MLT1J2 LTR MaLR 1 150 -300 1081 103 0 0 chr10 131423684 131423839 -14165449 + AluSg/x SINE Alu 146 300 -12 898 287 120 15 chr10 131424311 131424736 -14164552 + L2 LINE L2 2562 3038 -234 1073 135 51 17 chr10 131424813 131424991 -14164297 + THE1C LTR MaLR 1 184 -191 1077 119 0 0 chr10 131424993 131425181 -14164107 + AluSp SINE Alu 134 321 0 902 144 22 44 chr10 131425187 131425367 -14163921 + THE1C LTR MaLR 200 375 0 319 248 132 31 chr10 131425377 131425506 -14163782 + L2 LINE L2 3151 3292 -21 2109 85 0 4 chr10 131426187 131426504 -14162784 - AluSc SINE Alu 0 316 1 355 235 92 21 chr10 131426533 131426688 -14162600 + L1ME4a LINE L1 5762 5898 -223 663 275 19 0 chr10 131426774 131426934 -14162354 - MIR SINE MIR -2 260 98 31 26 0 0 chr10 131426995 131427033 -14162255 + AT_rich Low_complexity Low_complexity 1 38 0 1597 210 3 0 chr10 131427137 131427442 -14161846 + AluJb SINE Alu 5 310 -2 2582 105 6 0 chr10 131428047 131428400 -14160888 + THE1A LTR MaLR 1 355 0 1420 196 7 29 chr10 131428430 131428736 -14160552 + AluJo SINE Alu 5 303 -9 268 381 121 39 chr10 131429281 131429612 -14159676 + L2 LINE L2 2902 3259 -13 585 230 79 30 chr10 131430285 131430450 -14158838 - MIR SINE MIR -11 251 79 2268 84 3 0 chr10 131430733 131431032 -14158256 - AluSx SINE Alu -12 300 1 2400 66 3 0 chr10 131432825 131433126 -14156162 - AluSx SINE Alu -10 302 1 504 166 317 14 chr10 131433500 131433645 -14155643 + MER5A DNA MER1_type 1 189 0 2074 126 13 0 chr10 131433832 131434134 -14155154 + AluSx SINE Alu 1 306 -6 26 0 0 0 chr10 131434318 131434344 -14154944 + AT_rich Low_complexity Low_complexity 1 26 0 199 271 0 0 chr10 131434452 131434500 -14154788 + MIR SINE MIR 100 147 -115 2058 84 6 68 chr10 131434504 131434825 -14154463 + AluSq SINE Alu 1 301 -12 325 287 125 7 chr10 131434958 131435094 -14154194 + L2 LINE L2 3161 3312 -1 2294 99 0 0 chr10 131435285 131435589 -14153699 + AluSg1 SINE Alu 1 304 -5 1891 124 3 7 chr10 131435600 131435911 -14153377 + AluSx SINE Alu 1 310 0 328 207 76 86 chr10 131435976 131436174 -14153114 - L1MC5 LINE L1 -190 7771 7576 * 334 304 16 32 chr10 131436051 131436176 -14153112 + L1MC4 LINE L1 6581 6703 -1339 327 213 48 65 chr10 131436189 131436334 -14152954 - L1MCa LINE L1 -4361 2065 1941 255 61 0 0 chr10 131436347 131436380 -14152908 + (GA)n Simple_repeat Simple_repeat 2 34 0 1495 186 80 15 chr10 131436542 131436994 -14152294 - MLT1F LTR MaLR 0 567 1 2102 133 3 0 chr10 131437505 131437814 -14151474 + AluSx SINE Alu 1 310 -2 237 239 14 28 chr10 131437973 131438044 -14151244 - L2 LINE L2 -256 3016 2947 1531 167 64 3 chr10 131438749 131439031 -14150257 + AluJb SINE Alu 1 299 -13 2005 124 10 0 chr10 131439104 131439402 -14149886 - AluSx SINE Alu -11 301 1 863 266 15 30 chr10 131439496 131439759 -14149529 + MIR SINE MIR 4 262 0 1779 141 43 3 chr10 131439894 131440193 -14149095 - AluJo SINE Alu -1 311 1 945 202 40 21 chr10 131440252 131440494 -14148794 + MIR SINE MIR 10 248 -14 487 231 19 0 chr10 131440605 131440709 -14148579 + L2 LINE L2 2641 2746 -568 2277 100 0 6 chr10 131440713 131441024 -14148264 + AluSx SINE Alu 1 309 -3 472 339 82 38 chr10 131441199 131441491 -14147797 + L2 LINE L2 2968 3272 0 182 247 45 67 chr10 131441695 131441784 -14147504 - L3 LINE CR1 -105 1472 1386 1785 161 0 67 chr10 131441841 131442016 -14147272 - AluJo SINE Alu -5 307 163 2297 107 3 7 chr10 131442016 131442315 -14146973 - AluSx SINE Alu -14 298 1 1785 161 0 67 chr10 131442315 131442468 -14146820 - AluJo SINE Alu -149 163 1 2319 109 0 6 chr10 131442935 131443247 -14146041 - AluSx SINE Alu -2 310 1 2221 121 17 0 chr10 131443374 131443671 -14145617 + AluSx SINE Alu 1 302 -10 216 0 0 0 chr10 131443710 131443734 -14145554 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 2399 91 7 7 chr10 131443805 131444112 -14145176 - AluSx SINE Alu -5 307 1 22 56 0 0 chr10 131444166 131444202 -14145086 + AT_rich Low_complexity Low_complexity 1 36 0 1697 180 3 26 chr10 131444202 131444532 -14144756 + AluJo SINE Alu 1 312 0 1306 190 0 128 chr10 131444939 131445161 -14144127 - AluY SINE Alu 0 311 62 1540 82 0 0 chr10 131445161 131445344 -14143944 - AluY SINE Alu -128 183 1 2416 95 0 3 chr10 131445344 131445649 -14143639 - AluSx SINE Alu -8 304 1 1306 190 0 128 chr10 131445649 131445777 -14143511 - AluY SINE Alu -247 64 5 245 277 32 43 chr10 131445805 131445899 -14143389 + L2 LINE L2 3204 3296 -17 301 250 191 0 chr10 131446001 131446085 -14143203 + HAL1b LINE L1 1246 1345 -3 1291 159 69 153 chr10 131446643 131446987 -14142301 - MLT2D LTR ERVL 0 414 115 1983 146 0 23 chr10 131446987 131447289 -14141999 + AluJb SINE Alu 1 295 -17 1291 159 69 153 chr10 131447289 131447396 -14141892 - MLT2D LTR ERVL -299 115 1 2248 105 31 0 chr10 131447527 131447821 -14141467 + AluSg SINE Alu 1 303 -7 381 216 63 111 chr10 131448590 131448687 -14140601 + L1MC4a LINE L1 5309 5394 -2414 2365 83 17 0 chr10 131448687 131448987 -14140301 + AluSq SINE Alu 7 311 -2 381 216 63 111 chr10 131448987 131449079 -14140209 + L1MC4a LINE L1 5394 5489 -2319 225 0 0 0 chr10 131449805 131449830 -14139458 + (A)n Simple_repeat Simple_repeat 1 25 0 282 383 32 5 chr10 131449835 131450023 -14139265 + L1MC4a LINE L1 5510 5702 -2106 2164 100 11 7 chr10 131450025 131450305 -14138983 + AluSx SINE Alu 1 281 -31 264 120 0 0 chr10 131450306 131450356 -14138932 + (TC)n Simple_repeat Simple_repeat 1 50 0 213 39 0 0 chr10 131450356 131450382 -14138906 + (TA)n Simple_repeat Simple_repeat 1 26 0 656 248 107 9 chr10 131450383 131450613 -14138675 + L1MC4a LINE L1 5681 5775 -379 2020 119 12 83 chr10 131450742 131451078 -14138210 - AluSx SINE Alu 0 312 1 2085 139 76 59 chr10 131451104 131451286 -14138002 + MLT1C LTR MaLR 1 178 -289 829 173 0 0 chr10 131451286 131451419 -14137869 + FLAM_C SINE Alu 1 133 0 2085 139 76 59 chr10 131451419 131451431 -14137857 + MLT1C LTR MaLR 178 188 -279 2239 118 3 0 chr10 131451431 131451727 -14137561 + AluSx SINE Alu 1 297 -15 2085 139 76 59 chr10 131451727 131451990 -14137298 + MLT1C LTR MaLR 188 467 0 387 291 30 111 chr10 131452055 131452289 -14136999 + L2 LINE L2 3015 3229 -43 987 194 72 117 chr10 131452433 131452644 -14136644 - MLT1C LTR MaLR -90 377 158 2269 114 0 13 chr10 131452644 131452960 -14136328 - AluSx SINE Alu 0 312 1 1733 166 0 4 chr10 131452964 131453241 -14136047 - AluJb SINE Alu -11 301 26 987 194 72 117 chr10 131453241 131453384 -14135904 - MLT1C LTR MaLR -312 155 34 538 307 28 11 chr10 131453507 131453683 -14135605 + MIR SINE MIR 14 192 -70 183 80 0 0 chr10 131453704 131453729 -14135559 + (A)n Simple_repeat Simple_repeat 1 25 0 1373 179 123 8 chr10 131453730 131453998 -14135290 + AluSg1 SINE Alu 1 299 -10 452 289 118 0 chr10 131454918 131455070 -14134218 + MIR SINE MIR 15 184 -78 1257 290 43 10 chr10 131455070 131455493 -14133795 - LTR16A LTR ERVL 0 457 1 304 309 0 0 chr10 131455493 131455574 -14133714 + MIR SINE MIR 180 260 -2 * 391 333 40 45 chr10 131455569 131455757 -14133531 - L2 LINE L2 -7 3265 3077 4294 96 3 19 chr10 131455757 131456216 -14133072 - LTR10E LTR ERV1 0 633 185 2289 79 0 50 chr10 131456216 131456534 -14132754 - AluY SINE Alu -9 302 1 4294 96 3 19 chr10 131456534 131456717 -14132571 - LTR10E LTR ERV1 -448 185 1 255 111 0 0 chr10 131456726 131456762 -14132526 + MADE1 DNA Mariner 1 36 -44 345 335 27 116 chr10 131457030 131457172 -14132116 - L2 LINE L2 -549 2765 2612 384 59 0 0 chr10 131457172 131457223 -14132065 + (CA)n Simple_repeat Simple_repeat 2 52 0 345 335 27 116 chr10 131457223 131457380 -14131908 - L2 LINE L2 -702 2612 2503 2400 84 20 0 chr10 131457380 131457678 -14131610 + AluSx SINE Alu 1 304 -8 345 335 27 116 chr10 131457678 131457747 -14131541 - L2 LINE L2 -811 2503 2429 1745 138 209 21 chr10 131457924 131458301 -14130987 - LTR47A LTR ERVL -2 450 3 2211 114 0 3 chr10 131458397 131458694 -14130594 - AluSx SINE Alu -16 296 1 1024 161 42 10 chr10 131459320 131459512 -14129776 + LTR54 LTR ERV1 1 198 -312 2250 129 0 0 chr10 131459589 131459900 -14129388 + AluSx SINE Alu 1 311 -1 2071 112 24 3 chr10 131459936 131460232 -14129056 - AluSx SINE Alu -10 302 1 1900 110 55 63 chr10 131460239 131460620 -14128668 - Tigger2 DNA MER2_type -68 2650 2273 393 106 61 15 chr10 131460610 131460676 -14128612 - Tigger2 DNA MER2_type -2649 69 1 * 1587 199 13 17 chr10 131460723 131461024 -14128264 - AluJo SINE Alu 0 312 13 1178 142 19 10 chr10 131461039 131461244 -14128044 + LTR54 LTR ERV1 255 461 -49 25 0 0 0 chr10 131461892 131461917 -14127371 + GC_rich Low_complexity Low_complexity 1 25 0 210 323 126 39 chr10 131464352 131464479 -14124809 - MIR3 SINE MIR -15 193 56 183 344 0 56 chr10 131465641 131465731 -14123557 + MER5A DNA MER1_type 80 164 -25 1232 121 0 0 chr10 131467053 131467219 -14122069 - AluSg/x SINE Alu -7 303 138 192 77 0 0 chr10 131468855 131468881 -14120407 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 253 364 42 0 chr10 131469403 131469521 -14119767 + MIR SINE MIR 87 209 -53 803 98 0 61 chr10 131471245 131471397 -14117891 + FLAM_C SINE Alu 5 133 0 2218 124 3 0 chr10 131471489 131471788 -14117500 + AluSq SINE Alu 1 300 -13 1203 108 0 0 chr10 131471788 131471968 -14117320 + AluSg/x SINE Alu 134 312 0 285 266 172 0 chr10 131472030 131472158 -14117130 - MIR SINE MIR -66 196 47 2103 113 0 61 chr10 131472716 131473043 -14116245 - AluSx SINE Alu -3 309 3 2404 89 0 3 chr10 131473409 131473711 -14115577 + AluY SINE Alu 1 301 -10 1916 144 3 47 chr10 131473968 131474288 -14115000 - AluSx SINE Alu -4 308 3 224 258 92 58 chr10 131474511 131474631 -14114657 + MER5A DNA MER1_type 66 189 0 304 254 95 32 chr10 131474654 131474780 -14114508 - MIR SINE MIR -59 149 16 2029 89 9 89 chr10 131475607 131475768 -14113520 - AluSq SINE Alu -23 290 118 441 0 0 0 chr10 131475768 131475817 -14113471 + (TG)n Simple_repeat Simple_repeat 2 50 0 2029 89 9 89 chr10 131475817 131475830 -14113458 - AluSq SINE Alu -195 118 106 2557 56 0 13 chr10 131475830 131476135 -14113153 - AluY SINE Alu -10 301 1 2029 89 9 89 chr10 131476135 131476274 -14113014 - AluSq SINE Alu -207 106 1 600 255 31 12 chr10 131477519 131477680 -14111608 - L1ME3 LINE L1 -56 6106 5943 2272 125 0 0 chr10 131477688 131477993 -14111295 - AluSx SINE Alu -7 305 1 304 360 29 0 chr10 131478116 131478252 -14111036 - MIR SINE MIR -77 185 46 2306 146 87 2 chr10 131479487 131479933 -14109355 - MER31A LTR ERV1 -1 484 1 189 276 45 104 chr10 131481126 131481260 -14108028 - MIR SINE MIR -62 146 21 1957 103 8 0 chr10 131481786 131482038 -14107250 + AluSx SINE Alu 45 298 -14 184 306 81 27 chr10 131482296 131482407 -14106881 - MIR SINE MIR -19 243 127 2154 121 0 0 chr10 131482488 131482805 -14106483 - AluSx SINE Alu 0 317 1 210 200 0 0 chr10 131483792 131483847 -14105441 + L2 LINE L2 2914 2968 -304 1044 267 116 16 chr10 131484422 131484872 -14104416 - L1MC4 LINE L1 -1 8041 7547 2169 107 0 50 chr10 131485395 131485714 -14103574 + AluSx SINE Alu 1 303 -9 1834 178 0 3 chr10 131485769 131486056 -14103232 + AluJb SINE Alu 6 291 -21 738 166 23 0 chr10 131486459 131486721 -14102567 + CT-rich Low_complexity Low_complexity 1 268 0 1255 194 0 10 chr10 131486721 131486927 -14102361 - AluJo SINE Alu -24 288 85 1789 144 24 7 chr10 131488945 131489236 -14100052 + AluJo SINE Alu 1 296 -16 198 0 0 0 chr10 131489488 131489510 -14099778 + (T)n Simple_repeat Simple_repeat 1 22 0 186 26 77 26 chr10 131489554 131489593 -14099695 + (TTTA)n Simple_repeat Simple_repeat 1 41 0 2285 123 0 0 chr10 131489924 131490226 -14099062 + AluSx SINE Alu 1 302 -10 2186 102 16 20 chr10 131490620 131490924 -14098364 - AluSx SINE Alu -9 303 1 2024 141 3 35 chr10 131492583 131492895 -14096393 - AluSx SINE Alu -8 304 3 632 197 78 7 chr10 131493167 131493353 -14095935 + MLT2C1 LTR ERVL 1 289 -108 189 74 0 0 chr10 131493353 131493380 -14095908 + (CCCTG)n Simple_repeat Simple_repeat 2 28 0 632 197 78 7 chr10 131493380 131493436 -14095852 + MLT2C1 LTR ERVL 289 340 -57 857 161 15 0 chr10 131493437 131493585 -14095703 + AluJo SINE Alu 1 136 -176 225 94 0 0 chr10 131493635 131493667 -14095621 + MLT2C1 LTR ERVL 366 397 0 189 107 0 0 chr10 131493744 131493772 -14095516 + (T)n Simple_repeat Simple_repeat 1 28 0 2255 101 0 7 chr10 131494003 131494320 -14094968 + AluSp SINE Alu 1 313 0 272 300 64 18 chr10 131494894 131495004 -14094284 - Charlie8 DNA MER1_type -2203 214 100 2074 132 0 0 chr10 131495004 131495292 -14093996 - AluSq SINE Alu -12 301 14 404 157 132 25 chr10 131495735 131495856 -14093432 + L1MA4 LINE L1 6166 6299 -1 2053 117 13 23 chr10 131495882 131496191 -14093097 + AluSx SINE Alu 7 312 0 21 71 0 0 chr10 131496192 131496234 -14093054 + AT_rich Low_complexity Low_complexity 1 42 0 1977 114 39 20 chr10 131496809 131497115 -14092173 - AluSx SINE Alu 0 312 1 1748 119 8 0 chr10 131497130 131497381 -14091907 - AluSx SINE Alu -59 253 1 4191 94 4 0 chr10 131498671 131499223 -14090065 - MER41A LTR ERV1 0 554 1 877 202 94 15 chr10 131499235 131499438 -14089850 - MER20 DNA MER1_type 0 219 1 408 218 54 48 chr10 131499530 131499677 -14089611 + L1M4 LINE L1 2441 2588 -3558 3607 83 43 54 chr10 131499971 131500383 -14088905 + MER41A LTR ERV1 1 416 -138 2328 115 0 3 chr10 131500383 131500688 -14088600 - AluSx SINE Alu -8 304 1 2421 79 0 0 chr10 131500698 131500989 -14088299 - AluSg SINE Alu 0 310 20 3607 83 43 54 chr10 131500989 131501121 -14088167 + MER41A LTR ERV1 425 550 -4 881 132 25 23 chr10 131501482 131501731 -14087557 + AluJo SINE Alu 2 311 -1 312 309 56 40 chr10 131502053 131502179 -14087109 - L2 LINE L2 -8 3264 3137 2545 75 0 0 chr10 131502278 131502583 -14086705 + AluY SINE Alu 1 305 -6 325 350 78 39 chr10 131502993 131503110 -14086178 + L2 LINE L2 1563 1674 -1640 2381 106 0 0 chr10 131503110 131503411 -14085877 + AluSg SINE Alu 1 301 -9 325 350 78 39 chr10 131503411 131503653 -14085635 + L2 LINE L2 1674 1936 -1378 405 0 0 0 chr10 131503904 131503949 -14085339 + (TG)n Simple_repeat Simple_repeat 2 46 0 666 322 115 52 chr10 131504253 131504906 -14084382 + L2 LINE L2 1819 2533 -781 2376 91 0 3 chr10 131504906 131505203 -14084085 + AluSq SINE Alu 1 296 -17 666 322 115 52 chr10 131505203 131505351 -14083937 + L2 LINE L2 2533 2670 -644 4261 166 52 22 chr10 131505433 131506396 -14082892 - MER52A LTR ERV1 0 1755 835 240 340 63 19 chr10 131506447 131506506 -14082782 - L1M4 LINE L1 -1917 4229 4174 2316 114 3 0 chr10 131506506 131506803 -14082485 - AluSx SINE Alu -14 298 1 240 340 63 19 chr10 131506803 131506949 -14082339 - L1M4 LINE L1 -1972 4174 4015 202 414 0 14 chr10 131507022 131507162 -14082126 + L2 LINE L2 2842 2979 -293 271 271 195 0 chr10 131507841 131507959 -14081329 - MIR SINE MIR 0 262 122 1360 144 125 57 chr10 131508031 131508143 -14081145 + AluJo SINE Alu 7 110 -202 2366 73 24 0 chr10 131508143 131508431 -14080857 - AluY SINE Alu -16 295 1 1360 144 125 57 chr10 131508431 131508582 -14080706 + AluJo SINE Alu 110 288 -24 657 282 109 40 chr10 131508584 131508829 -14080459 + MLT1J LTR MaLR 102 379 -132 1700 207 83 34 chr10 131508829 131509274 -14080014 - MLT1C LTR MaLR 0 467 1 657 282 109 40 chr10 131509274 131509376 -14079912 + MLT1J LTR MaLR 379 473 -38 201 253 72 60 chr10 131509828 131509911 -14079377 - MIR SINE MIR -12 250 167 2101 154 3 0 chr10 131509911 131510222 -14079066 + AluJb SINE Alu 1 312 0 262 143 0 20 chr10 131510256 131510305 -14078983 - MLT1J1 LTR MaLR -52 394 347 25 31 0 0 chr10 131510434 131510466 -14078822 + AT_rich Low_complexity Low_complexity 1 32 0 24 0 0 0 chr10 131510571 131510595 -14078693 + AT_rich Low_complexity Low_complexity 1 24 0 2257 104 0 26 chr10 131510721 131511028 -14078260 - AluSx SINE Alu -13 299 1 234 325 25 0 chr10 131511172 131511252 -14078036 - L2 LINE L2 -3 3310 3229 522 108 48 0 chr10 131511587 131511670 -14077618 + AluY SINE Alu 218 304 -7 387 326 99 14 chr10 131511793 131511964 -14077324 + MIR3 SINE MIR 22 208 0 2569 74 0 3 chr10 131512309 131512618 -14076670 + AluSg SINE Alu 1 308 -2 1937 201 45 16 chr10 131513745 131514189 -14075099 + MLT1C LTR MaLR 11 467 0 957 134 0 0 chr10 131514245 131514372 -14074916 - FLAM_C SINE Alu -16 127 1 24 63 0 16 chr10 131514434 131514459 -14074829 + AT_rich Low_complexity Low_complexity 1 25 -37 2280 96 0 0 chr10 131514459 131514752 -14074536 - AluY SINE Alu -18 293 1 24 63 0 16 chr10 131514752 131514789 -14074499 + AT_rich Low_complexity Low_complexity 25 62 0 234 0 0 0 chr10 131515104 131515130 -14074158 + (T)n Simple_repeat Simple_repeat 1 26 0 740 172 0 0 chr10 131515624 131515740 -14073548 + FLAM_C SINE Alu 9 124 -19 2163 111 34 0 chr10 131515930 131516228 -14073060 - AluSg SINE Alu -2 308 1 1668 153 28 42 chr10 131516496 131516783 -14072505 - AluJo SINE Alu -29 283 1 1531 182 3 20 chr10 131517021 131517323 -14071965 + MLT1B LTR MaLR 1 297 -93 * 2461 113 14 3 chr10 131517316 131517678 -14071610 + THE1C LTR MaLR 9 374 -1 394 232 21 0 chr10 131517678 131517773 -14071515 + MLT1B LTR MaLR 294 390 0 2111 112 47 49 chr10 131518198 131518563 -14070725 - THE1B LTR MaLR 0 364 1 1769 171 46 83 chr10 131518641 131518825 -14070463 + MLT1C LTR MaLR 6 195 -272 1860 179 13 0 chr10 131518825 131519127 -14070161 + AluJo SINE Alu 5 310 -2 1769 171 46 83 chr10 131519127 131519422 -14069866 + MLT1C LTR MaLR 195 467 0 1986 129 7 24 chr10 131519536 131519857 -14069431 + AluSx SINE Alu 5 312 0 901 194 6 6 chr10 131520324 131520489 -14068799 - FRAM SINE Alu 0 166 2 688 161 55 91 chr10 131520746 131520945 -14068343 + MLT1C LTR MaLR 17 208 -259 871 126 0 22 chr10 131520945 131521080 -14068208 + FLAM_C SINE Alu 1 132 -1 2236 130 13 0 chr10 131521095 131521402 -14067886 + AluJo SINE Alu 1 311 -1 186 43 0 0 chr10 131521422 131521445 -14067843 + (CA)n Simple_repeat Simple_repeat 2 24 0 1012 229 29 4 chr10 131521492 131521737 -14067551 + MLT1C LTR MaLR 215 465 -2 2266 99 88 23 chr10 131521782 131522124 -14067164 + THE1B LTR MaLR 1 364 0 1218 219 69 60 chr10 131522228 131522457 -14066831 - MLT1D LTR MaLR 0 505 280 2400 94 0 3 chr10 131522457 131522765 -14066523 - AluSg SINE Alu -3 307 1 1218 219 69 60 chr10 131522765 131522861 -14066427 - MLT1D LTR MaLR -225 280 186 2254 104 0 13 chr10 131522861 131523159 -14066129 - AluSq SINE Alu -19 294 1 1218 219 69 60 chr10 131523159 131523283 -14066005 - MLT1D LTR MaLR -319 186 51 234 305 57 29 chr10 131523465 131523570 -14065718 + MIR SINE MIR 84 191 -71 336 222 18 63 chr10 131523705 131523839 -14065449 - L1MC4 LINE L1 -1339 6983 1994 2316 120 0 0 chr10 131523855 131524163 -14065125 + AluSg SINE Alu 3 310 0 2197 117 0 0 chr10 131524192 131524498 -14064790 - AluSx SINE Alu 0 306 1 195 42 0 0 chr10 131525057 131525081 -14064207 + (TG)n Simple_repeat Simple_repeat 1 24 0 443 233 110 27 chr10 131525289 131525435 -14063853 - MER69A DNA AcHobo -19 158 1 35 24 0 0 chr10 131525568 131525610 -14063678 + AT_rich Low_complexity Low_complexity 1 42 0 1900 158 0 7 chr10 131525668 131525960 -14063328 - AluJo SINE Alu -22 290 1 2323 88 0 16 chr10 131526046 131526353 -14062935 - AluSg SINE Alu -8 302 1 320 349 13 13 chr10 131526387 131526536 -14062752 - MIR SINE MIR -66 196 48 2187 119 3 0 chr10 131528108 131528402 -14060886 - AluSp SINE Alu -18 295 1 315 330 11 0 chr10 131528481 131528572 -14060716 - L1MC4 LINE L1 -1340 6702 6611 * 361 249 92 146 chr10 131528568 131528635 -14060653 - L1MC4a LINE L1 -1636 6172 6103 430 104 0 0 chr10 131528635 131528702 -14060586 + L1MA3 LINE L1 6239 6305 0 361 249 92 146 chr10 131528702 131528936 -14060352 - L1MC4a LINE L1 -1705 6103 5894 2538 96 0 0 chr10 131528936 131529248 -14060040 - AluSx SINE Alu 0 312 1 361 249 92 146 chr10 131529248 131529335 -14059953 - L1MC4a LINE L1 -1914 5894 5804 2334 98 0 7 chr10 131529555 131529852 -14059436 - AluSq SINE Alu -18 295 1 2495 87 0 3 chr10 131529856 131530168 -14059120 - AluSq SINE Alu -2 311 1 889 126 0 49 chr10 131530174 131530317 -14058971 - FRAM SINE Alu -7 169 34 276 30 0 0 chr10 131530493 131530526 -14058762 + (TTTTA)n Simple_repeat Simple_repeat 5 37 0 2079 98 4 4 chr10 131530530 131530805 -14058483 - AluSx SINE Alu -37 275 1 1403 184 90 45 chr10 131530954 131531289 -14057999 - MLT1A1 LTR MaLR 0 365 10 2372 171 73 8 chr10 131531302 131531783 -14057505 - MLT2B1 LTR ERVL -8 512 1 2294 98 7 3 chr10 131531828 131532124 -14057164 + AluSq SINE Alu 17 313 0 9125 34 11 225 chr10 131532172 131533907 -14055381 + SVA Other Other 24 1386 0 23 0 0 0 chr10 131533984 131534007 -14055281 + AT_rich Low_complexity Low_complexity 1 23 0 331 233 125 19 chr10 131534246 131534358 -14054930 - MIR3 SINE MIR -18 190 63 783 181 34 51 chr10 131534959 131535136 -14054152 - MER5B DNA MER1_type -1 177 4 290 114 86 57 chr10 131535643 131535713 -14053575 + LTR9 LTR ERV1 457 528 -84 180 0 0 0 chr10 131535713 131535733 -14053555 + (A)n Simple_repeat Simple_repeat 1 20 0 229 330 64 0 chr10 131535884 131535978 -14053310 - MIR3 SINE MIR -96 112 13 240 302 23 45 chr10 131536623 131536868 -14052420 + G-rich Low_complexity Low_complexity 1 239 0 183 80 0 0 chr10 131536877 131536902 -14052386 + (CCG)n Simple_repeat Simple_repeat 1 25 0 28 61 0 0 chr10 131537024 131537073 -14052215 + GC_rich Low_complexity Low_complexity 1 49 0 205 241 9 52 chr10 131537181 131537297 -14051991 + (CGGGG)n Simple_repeat Simple_repeat 2 112 0 238 236 18 0 chr10 131537894 131537949 -14051339 - L2 LINE L2 -68 3204 3149 323 261 139 42 chr10 131538212 131538377 -14050911 - MIR SINE MIR -50 212 32 2007 132 0 4 chr10 131539979 131540260 -14049028 - AluSx SINE Alu -32 280 1 1798 174 0 26 chr10 131540387 131540698 -14048590 - AluJb SINE Alu -9 303 1 2488 93 0 0 chr10 131540911 131541223 -14048065 - AluSq SINE Alu -1 312 1 2477 61 0 3 chr10 131541606 131541899 -14047389 - AluSc SINE Alu -17 292 1 1947 149 7 0 chr10 131542194 131542483 -14046805 + AluSx SINE Alu 1 291 -21 1851 125 54 27 chr10 131542849 131543145 -14046143 - AluSq SINE Alu -7 306 3 2306 108 3 6 chr10 131543304 131543618 -14045670 - AluSq SINE Alu 0 313 1 877 192 154 7 chr10 131543634 131543846 -14045442 - MIR SINE MIR -17 245 13 206 250 188 16 chr10 131544685 131544749 -14044539 + L2 LINE L2 3194 3268 -4 800 145 8 46 chr10 131545314 131545445 -14043843 - FLAM_C SINE Alu -12 131 6 21 57 0 0 chr10 131546074 131546109 -14043179 + AT_rich Low_complexity Low_complexity 1 35 0 1328 97 0 6 chr10 131546663 131546839 -14042449 + AluSq SINE Alu 1 175 -138 826 153 0 36 chr10 131547145 131547282 -14042006 - FLAM_C SINE Alu -11 132 1 1851 130 31 24 chr10 131547652 131547945 -14041343 - AluJo SINE Alu -17 295 1 571 212 91 12 chr10 131548206 131548371 -14040917 + MER5B DNA MER1_type 1 178 0 243 0 0 0 chr10 131549465 131549492 -14039796 + (CA)n Simple_repeat Simple_repeat 2 28 0 235 387 0 11 chr10 131549498 131549591 -14039697 - L2 LINE L2 -27 3245 3154 1712 181 10 13 chr10 131549714 131550013 -14039275 + AluJo SINE Alu 1 298 -14 1629 175 45 7 chr10 131550443 131550734 -14038554 - AluJb SINE Alu -10 302 1 274 280 60 0 chr10 131550739 131550889 -14038399 - L1MDa LINE L1 -3961 2579 2421 2335 90 0 16 chr10 131551345 131551656 -14037632 - AluSg SINE Alu -4 306 1 196 280 60 0 chr10 131552266 131552316 -14036972 - L2 LINE L2 -9 3263 3211 26 0 0 0 chr10 131552326 131552352 -14036936 + AT_rich Low_complexity Low_complexity 1 26 0 2245 117 0 0 chr10 131552352 131552650 -14036638 - AluSq SINE Alu -15 298 1 1678 126 53 21 chr10 131552654 131552939 -14036349 - AluSx SINE Alu -18 294 1 2231 91 0 11 chr10 131552951 131553279 -14036009 - AluSg1 SINE Alu 0 325 1 191 333 26 17 chr10 131553287 131553404 -14035884 - L2 LINE L2 -690 2624 2507 2121 107 4 0 chr10 131553534 131553815 -14035473 + AluSp SINE Alu 1 282 -31 195 42 0 0 chr10 131553819 131553843 -14035445 + (GAAA)n Simple_repeat Simple_repeat 3 26 0 23 0 0 0 chr10 131554470 131554493 -14034795 + GC_rich Low_complexity Low_complexity 1 23 0 299 327 0 0 chr10 131554633 131554740 -14034548 + L1M4 LINE L1 2335 2441 -3705 316 262 127 0 chr10 131554884 131555010 -14034278 + MER112 DNA MER1_type 89 230 -30 1841 158 27 7 chr10 131555370 131555668 -14033620 - AluJo SINE Alu -8 304 1 239 119 0 51 chr10 131556127 131556186 -14033102 + (T)n Simple_repeat Simple_repeat 1 56 0 305 236 11 45 chr10 131556284 131556373 -14032915 - MER112 DNA MER1_type -144 116 31 2361 93 3 0 chr10 131556521 131556823 -14032465 - AluSg SINE Alu -7 303 1 2276 105 0 16 chr10 131557605 131557910 -14031378 - AluSx SINE Alu -12 300 1 1991 125 28 10 chr10 131558051 131558340 -14030948 - AluSx SINE Alu -18 294 1 24 0 0 0 chr10 131558344 131558368 -14030920 + AT_rich Low_complexity Low_complexity 1 24 0 454 278 139 31 chr10 131558380 131558704 -14030584 + L1ME4a LINE L1 5525 5883 -238 3838 173 185 7 chr10 131558746 131560198 -14029090 - MER52A LTR ERV1 0 1755 1 374 298 57 15 chr10 131560380 131560585 -14028703 + MIR SINE MIR 1 216 -46 1826 124 38 0 chr10 131560625 131560890 -14028398 - AluSx SINE Alu -37 275 1 797 201 30 50 chr10 131561166 131561365 -14027923 + MER105 DNA DNA 2 196 -8 219 280 8 76 chr10 131562131 131562249 -14027039 - L2 LINE L2 -93 3220 3111 753 178 0 0 chr10 131562633 131562751 -14026537 - FLAM_C SINE Alu -24 119 2 23 0 0 0 chr10 131562885 131562908 -14026380 + AT_rich Low_complexity Low_complexity 1 23 0 2410 102 0 0 chr10 131563124 131563429 -14025859 + AluSp SINE Alu 1 305 -8 244 194 194 101 chr10 131563598 131563835 -14025453 - L1ME3A LINE L1 -237 5933 5675 434 228 97 35 chr10 131564172 131564317 -14024971 - MLT1H LTR MaLR 0 549 396 2352 168 16 13 chr10 131565998 131566386 -14022902 - MLT1B LTR MaLR 0 390 2 292 264 139 42 chr10 131566577 131566697 -14022591 + MIR SINE MIR 105 243 -19 2342 108 0 0 chr10 131566697 131567004 -14022284 + AluSg SINE Alu 1 307 -3 292 264 139 42 chr10 131567004 131567027 -14022261 + MIR SINE MIR 243 262 0 2126 107 0 0 chr10 131567175 131567455 -14021833 + AluSx SINE Alu 1 280 -32 216 0 0 0 chr10 131567458 131567482 -14021806 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 198 0 0 0 chr10 131567687 131567709 -14021579 + (A)n Simple_repeat Simple_repeat 1 22 0 2115 101 25 0 chr10 131567880 131568194 -14021094 - AluSx SINE Alu 0 321 1 2186 112 3 7 chr10 131568334 131568629 -14020659 + AluSx SINE Alu 1 294 -18 233 303 34 63 chr10 131568644 131568819 -14020469 + L2 LINE L2 3134 3303 -10 * 296 253 27 13 chr10 131568818 131568893 -14020395 - L2 LINE L2 -8 3264 3189 1008 158 6 18 chr10 131569984 131570148 -14019140 - AluJo SINE Alu -150 162 1 1606 108 131 15 chr10 131570222 131570482 -14018806 - AluSg1 SINE Alu -19 290 1 1221 134 0 6 chr10 131571119 131571291 -14017997 + FAM SINE Alu 1 171 -4 1554 165 0 16 chr10 131572756 131572999 -14016289 + MER8 DNA MER2_type 1 239 0 1862 190 3 3 chr10 131573010 131573336 -14015952 - MLT1A1 LTR MaLR -2 363 38 1199 148 34 29 chr10 131573407 131573616 -14015672 - MER2 DNA MER2_type -135 210 1 2310 203 17 19 chr10 131573659 131574123 -14015165 - MLT1A1-int LTR MaLR -6 1729 1267 305 238 0 0 chr10 131574239 131574302 -14014986 - MLT1A1-int LTR MaLR -994 741 679 3392 179 28 23 chr10 131574447 131575102 -14014186 - MLT1A1-int LTR MaLR -1073 662 5 219 36 0 0 chr10 131575171 131575199 -14014089 + (CA)n Simple_repeat Simple_repeat 1 28 0 2489 124 26 87 chr10 131575199 131575406 -14013882 + Tigger2a DNA MER2_type 3 221 -2487 2191 100 17 3 chr10 131575406 131575705 -14013583 - AluSq SINE Alu -10 303 1 2489 124 26 87 chr10 131575705 131575747 -14013541 + Tigger2a DNA MER2_type 221 264 -2444 2236 98 0 3 chr10 131575747 131576061 -14013227 - AluSq SINE Alu 0 313 1 2489 124 26 87 chr10 131576061 131576206 -14013082 + Tigger2a DNA MER2_type 264 370 -2338 1807 162 0 30 chr10 131576206 131576508 -14012780 - AluJb SINE Alu -19 293 1 2489 124 26 87 chr10 131576508 131576568 -14012720 + Tigger2a DNA MER2_type 370 432 -2 369 0 0 0 chr10 131576568 131576609 -14012679 + (TG)n Simple_repeat Simple_repeat 2 42 0 229 137 0 53 chr10 131576615 131576710 -14012578 + (TA)n Simple_repeat Simple_repeat 1 90 0 2626 136 100 0 chr10 131576771 131577191 -14012097 - MLT2B1 LTR ERVL -58 462 1 1205 274 175 24 chr10 131577266 131577642 -14011646 + L1MEc LINE L1 1285 1603 -4612 2267 119 0 3 chr10 131577642 131577952 -14011336 + AluSx SINE Alu 1 309 -3 1205 274 175 24 chr10 131577952 131578698 -14010590 + L1MEc LINE L1 1603 2547 -3668 1781 171 22 13 chr10 131579065 131579381 -14009907 + 7SLRNA srpRNA srpRNA 1 319 -1 24 0 0 0 chr10 131580097 131580121 -14009167 + AT_rich Low_complexity Low_complexity 1 24 0 811 186 0 0 chr10 131580121 131580250 -14009038 - FLAM_A SINE Alu -4 129 1 2621 143 38 80 chr10 131580251 131580775 -14008513 + MLT2B2 LTR ERVL 2 503 -12 25 31 0 0 chr10 131581727 131581759 -14007529 + AT_rich Low_complexity Low_complexity 1 32 0 2169 190 14 29 chr10 131581760 131582202 -14007086 - L1MB7 LINE L1 -20 6164 5730 24 0 0 0 chr10 131582211 131582235 -14007053 + AT_rich Low_complexity Low_complexity 1 24 0 432 0 0 0 chr10 131582664 131582712 -14006576 + (TA)n Simple_repeat Simple_repeat 2 49 0 2444 66 0 10 chr10 131582712 131583013 -14006275 - AluY SINE Alu -13 298 1 559 226 55 7 chr10 131583054 131583200 -14006088 - MER31B LTR ERV1 -43 423 271 257 293 112 49 chr10 131583205 131583566 -14005722 - L1MB7 LINE L1 -841 5305 4968 2264 98 0 20 chr10 131583566 131583863 -14005425 - AluSg SINE Alu -19 291 1 257 293 112 49 chr10 131583863 131583884 -14005404 - L1MB7 LINE L1 -1178 4968 4950 1747 184 0 0 chr10 131583884 131584172 -14005116 - AluJo SINE Alu -24 288 1 1010 202 31 0 chr10 131584174 131584367 -14004921 - L1PA16 LINE L1 -7 6159 5961 257 293 112 49 chr10 131584367 131584506 -14004782 - L1MB7 LINE L1 -1196 4950 4747 848 183 0 21 chr10 131584539 131584681 -14004607 - FRAM SINE Alu -36 140 2 23 0 0 0 chr10 131584772 131584795 -14004493 + AT_rich Low_complexity Low_complexity 1 23 0 2320 94 3 0 chr10 131584798 131585097 -14004191 + AluSc SINE Alu 1 300 -9 271 319 50 0 chr10 131585110 131585229 -14004059 - L1MB7 LINE L1 -1534 4612 4488 744 160 0 0 chr10 131585304 131585423 -14003865 - FLAM_C SINE Alu 0 143 25 1814 146 0 29 chr10 131586070 131586378 -14002910 - AluJb SINE Alu -13 299 1 274 200 24 47 chr10 131586512 131586597 -14002691 + L1MC5 LINE L1 7824 7906 -55 411 327 52 13 chr10 131586819 131586972 -14002316 - MIR SINE MIR -75 187 29 22 0 0 0 chr10 131587162 131587184 -14002104 + AT_rich Low_complexity Low_complexity 1 22 0 306 50 0 0 chr10 131587476 131587516 -14001772 + (TG)n Simple_repeat Simple_repeat 1 40 0 2024 161 0 0 chr10 131587560 131587864 -14001424 - AluJo SINE Alu -8 304 1 700 211 7 28 chr10 131587865 131588007 -14001281 - AluJo SINE Alu -172 140 2 1893 119 3 60 chr10 131588040 131588359 -14000929 + AluSg SINE Alu 1 301 -9 186 243 0 0 chr10 131588575 131588612 -14000676 + L2 LINE L2 3226 3262 -10 2094 141 0 3 chr10 131588808 131589121 -14000167 - AluSx SINE Alu 0 312 1 1678 211 78 56 chr10 131589421 131589937 -13999351 - L1MC4a LINE L1 -1331 6477 5951 2313 88 52 88 chr10 131589979 131590220 -13999068 - Tigger3(Golem) DNA MER2_type -238 2791 2570 1779 174 0 22 chr10 131590220 131590537 -13998751 - AluJo SINE Alu -2 310 1 2313 88 52 88 chr10 131590537 131590716 -13998572 - Tigger3(Golem) DNA MER2_type -459 2570 2386 1518 164 105 12 chr10 131590689 131591012 -13998276 - Tigger3(Golem) DNA MER2_type -879 2150 1 * 23 22 0 44 chr10 131591086 131591106 -13998182 + AT_rich Low_complexity Low_complexity 1 20 -23 1785 175 0 7 chr10 131591106 131591403 -13997885 + AluJb SINE Alu 1 295 -17 23 22 0 44 chr10 131591403 131591427 -13997861 + AT_rich Low_complexity Low_complexity 20 43 0 2202 153 18 9 chr10 131591444 131591785 -13997503 - MER2 DNA MER2_type 0 344 1 1860 205 79 32 chr10 131591821 131592379 -13996909 - L1MC4a LINE L1 -351 5815 5283 195 295 66 0 chr10 131593049 131593110 -13996178 - MIR3 SINE MIR -46 162 98 245 299 52 114 chr10 131593272 131593362 -13995926 - MIR SINE MIR -31 231 137 616 148 130 9 chr10 131593362 131593477 -13995811 + FLAM_C SINE Alu 1 129 -4 245 299 52 114 chr10 131593477 131593597 -13995691 - MIR SINE MIR -125 137 34 3086 161 20 27 chr10 131595514 131596098 -13993190 - L1MB8 LINE L1 -23 6155 5576 1889 87 0 16 chr10 131596098 131596352 -13992936 - AluY SINE Alu -8 303 54 486 0 0 0 chr10 131596352 131596406 -13992882 + (GA)n Simple_repeat Simple_repeat 1 54 0 1742 161 0 18 chr10 131596420 131596705 -13992583 + AluJo SINE Alu 21 300 -12 1374 160 153 34 chr10 131597384 131597646 -13991642 - AluJo SINE Alu -9 293 1 1141 228 64 16 chr10 131597740 131598052 -13991236 - MER46C DNA MER2_type 0 338 12 1942 145 25 0 chr10 131598133 131598416 -13990872 + AluSx SINE Alu 7 296 -16 337 168 0 32 chr10 131598416 131598511 -13990777 + GA-rich Low_complexity Low_complexity 1 92 0 584 331 128 14 chr10 131598892 131599321 -13989967 - L2 LINE L2 -832 2482 2005 2386 90 3 0 chr10 131599768 131600068 -13989220 + AluSp SINE Alu 1 301 -12 988 229 200 45 chr10 131600438 131601058 -13988230 - L2 LINE L2 -961 2353 1638 198 0 0 0 chr10 131603391 131603413 -13985875 + (T)n Simple_repeat Simple_repeat 1 22 0 281 133 0 0 chr10 131603608 131603653 -13985635 - L2 LINE L2 0 3313 3269 405 0 0 0 chr10 131604218 131604263 -13985025 + (CAAAA)n Simple_repeat Simple_repeat 2 46 0 1965 122 16 7 chr10 131604465 131604769 -13984519 - AluSx SINE Alu -5 307 1 198 0 0 0 chr10 131604817 131604839 -13984449 + (TTTTTA)n Simple_repeat Simple_repeat 2 23 0 6391 23 1 7 chr10 131604849 131605558 -13983730 - SVA Other Other -8 1378 674 304 269 32 31 chr10 131605884 131606062 -13983226 + A-rich Low_complexity Low_complexity 1 178 0 5634 69 23 65 chr10 131606356 131607553 -13981735 - SVA Other Other -518 868 7 628 244 153 5 chr10 131607753 131607962 -13981326 - MIR SINE MIR -1 261 22 926 133 0 15 chr10 131610233 131610368 -13978920 - FLAM_A SINE Alu 0 133 1 369 250 0 18 chr10 131610847 131610959 -13978329 + L1ME LINE L1 4488 4597 -1549 238 310 112 0 chr10 131611053 131611169 -13978119 + L1ME LINE L1 5523 5651 -519 * 421 204 125 9 chr10 131611155 131611300 -13977988 + L1MC4a LINE L1 4954 5113 -1033 43 64 0 0 chr10 131611449 131611527 -13977761 + AT_rich Low_complexity Low_complexity 1 78 0 425 248 63 38 chr10 131611550 131611710 -13977578 + L1MC4a LINE L1 5124 5278 -892 2157 110 13 19 chr10 131611710 131612018 -13977270 + AluSg SINE Alu 2 307 -3 425 248 63 38 chr10 131612018 131612183 -13977105 + L1MC4a LINE L1 5278 5481 -689 1381 163 9 0 chr10 131612189 131612404 -13976884 + AluSg/x SINE Alu 85 301 -9 247 204 0 0 chr10 131612412 131612456 -13976832 + L1MC4a LINE L1 5486 5529 -637 264 317 132 26 chr10 131612484 131612711 -13976577 + L1MC4a LINE L1 5664 5914 -1894 1125 181 0 15 chr10 131613000 131613205 -13976083 + AluJb SINE Alu 109 310 -2 973 207 78 96 chr10 131613452 131613839 -13975449 + MLT1L LTR MaLR 145 524 -91 298 237 87 135 chr10 131613991 131614459 -13974829 - L1MC/D LINE L1 -348 5773 5327 759 296 89 47 chr10 131614712 131615378 -13973910 - L1MC/D LINE L1 -1133 5013 4320 2007 107 7 23 chr10 131616163 131616462 -13972826 - AluSx SINE Alu -18 294 1 275 284 179 31 chr10 131617512 131617674 -13971614 + MIR SINE MIR 47 232 -30 22 70 0 0 chr10 131617751 131617794 -13971494 + AT_rich Low_complexity Low_complexity 1 43 0 305 102 0 0 chr10 131618243 131618292 -13970996 - Alu SINE Alu -2 298 250 324 204 175 19 chr10 131618321 131618424 -13970864 - LTR50 LTR ERVL -590 205 87 1933 124 22 32 chr10 131618424 131618738 -13970550 + AluSx SINE Alu 1 311 -1 577 293 19 28 chr10 131618807 131619019 -13970269 + MIR SINE MIR 37 246 -16 336 212 15 0 chr10 131619728 131619794 -13969494 - Charlie8 DNA MER1_type -2233 184 118 735 219 107 15 chr10 131619868 131620064 -13969224 + MIR SINE MIR 49 262 0 2254 101 3 13 chr10 131620377 131620683 -13968605 + AluSx SINE Alu 1 303 -9 1078 191 150 10 chr10 131622833 131623127 -13966161 - L1M4 LINE L1 -801 5345 5011 446 120 74 65 chr10 131623525 131623633 -13965655 + MER96B DNA MER1_type? 17 125 -292 21 0 0 0 chr10 131624776 131624797 -13964491 + AT_rich Low_complexity Low_complexity 1 21 0 1487 186 81 3 chr10 131624804 131625089 -13964199 + AluJo SINE Alu 6 312 0 776 192 0 0 chr10 131625149 131625274 -13964014 + FLAM_C SINE Alu 1 125 -8 2098 108 11 0 chr10 131625544 131625852 -13963436 + AluSg SINE Alu 1 311 0 2405 74 3 0 chr10 131626302 131626599 -13962689 - AluY SINE Alu -13 298 1 4169 169 43 35 chr10 131628263 131629131 -13960157 - L1MB7 LINE L1 -10 6174 5300 545 217 72 36 chr10 131629209 131629375 -13959913 + MER96B DNA MER1_type? 242 413 -4 201 94 0 0 chr10 131630215 131630247 -13959041 + (CGGA)n Simple_repeat Simple_repeat 3 34 0 225 0 0 0 chr10 131630653 131630678 -13958610 + (T)n Simple_repeat Simple_repeat 1 25 0 209 356 0 0 chr10 131633790 131633849 -13955439 + L2 LINE L2 3171 3229 -43 2400 247 62 16 chr10 131634366 131635102 -13954186 - L1MC4a LINE L1 -5 7803 7034 264 222 303 0 chr10 131635263 131635362 -13953926 + MIR SINE MIR 16 144 -118 854 214 158 21 chr10 131636475 131636760 -13952528 + MER33 DNA MER1_type 1 324 0 1368 132 189 8 chr10 131638895 131639138 -13950150 + AluJb SINE Alu 1 287 -25 24 91 0 0 chr10 131641488 131641554 -13947734 + AT_rich Low_complexity Low_complexity 1 66 0 3046 216 107 59 chr10 131642642 131643645 -13945643 + L1M4 LINE L1 2 1052 -5490 1206 164 40 132 chr10 131643647 131643951 -13945337 + AluJo SINE Alu 1 276 -36 3122 234 92 49 chr10 131643964 131644821 -13944467 + L1M4 LINE L1 1042 1860 -4965 1755 148 0 67 chr10 131644821 131644939 -13944349 + AluJb SINE Alu 1 125 -187 192 40 0 0 chr10 131644939 131644964 -13944324 + (CA)n Simple_repeat Simple_repeat 1 25 0 1755 148 0 67 chr10 131644964 131645176 -13944112 + AluJb SINE Alu 125 309 -3 3122 234 92 49 chr10 131645176 131645801 -13943487 + L1M4 LINE L1 1860 2725 -4100 1747 168 17 0 chr10 131646127 131646419 -13942869 - AluJb SINE Alu -13 299 3 333 0 0 0 chr10 131647045 131647082 -13942206 + (T)n Simple_repeat Simple_repeat 1 37 0 1333 67 6 0 chr10 131647920 131648085 -13941203 + AluY SINE Alu 131 296 -15 888 111 8 0 chr10 131648177 131648294 -13940994 + FLAM_C SINE Alu 1 118 -15 185 59 98 29 chr10 131648504 131648606 -13940682 + (TA)n Simple_repeat Simple_repeat 2 110 0 304 296 0 25 chr10 131649861 131649942 -13939346 + Charlie1 DNA MER1_type 1 79 -2682 * 2177 194 104 14 chr10 131649933 131650500 -13938788 + Charlie1 DNA MER1_type 2144 2761 0 695 249 71 43 chr10 131651401 131651654 -13937634 - MIR SINE MIR -2 260 1 613 254 173 12 chr10 131651677 131652000 -13937288 + L1ME4a LINE L1 5678 6052 -69 2176 123 55 19 chr10 131652204 131652529 -13936759 + MER1B DNA MER1_type 1 337 0 2063 109 42 0 chr10 131653056 131653341 -13935947 - AluSq SINE Alu -16 297 1 2374 99 3 0 chr10 131653947 131654250 -13935038 - AluSx SINE Alu -8 304 1 486 188 339 16 chr10 131654674 131654860 -13934428 - MIR SINE MIR -1 261 16 2193 88 53 170 chr10 131654862 131655375 -13933913 + MLT2A2 LTR ERVL 1 453 0 3262 207 250 63 chr10 131655658 131657058 -13932230 + L1MC4 LINE L1 5812 7425 -383 693 163 0 32 chr10 131657076 131657199 -13932089 + MLT1A1 LTR MaLR 194 312 -53 251 157 98 0 chr10 131657209 131657260 -13932028 + L1MC4a LINE L1 7479 7534 -274 * 626 238 102 38 chr10 131657227 131657462 -13931826 + L1MC4a LINE L1 6338 6587 -1221 976 251 38 26 chr10 131657528 131657871 -13931417 + L1MC4 LINE L1 7694 8040 -2 25 0 0 0 chr10 131658119 131658144 -13931144 + AT_rich Low_complexity Low_complexity 1 25 0 2015 130 6 22 chr10 131658620 131658935 -13930353 + AluSx SINE Alu 3 312 0 1370 199 130 49 chr10 131659233 131659641 -13929647 + MLT1D LTR MaLR 65 505 0 220 330 52 17 chr10 131660276 131660391 -13928897 - L2 LINE L2 -4 3309 3191 1519 203 58 21 chr10 131660393 131660755 -13928533 + L1MD2 LINE L1 5756 6011 -167 2350 100 3 0 chr10 131660756 131661066 -13928222 + AluSp SINE Alu 1 311 -2 1660 188 3 25 chr10 131661277 131661596 -13927692 + AluJb SINE Alu 1 312 0 589 303 73 28 chr10 131662213 131662530 -13926758 + L1MEc LINE L1 360 690 -6031 834 161 103 203 chr10 131662807 131662918 -13926370 + AluJo SINE Alu 5 125 -198 1920 162 7 3 chr10 131662918 131663227 -13926061 - AluJb SINE Alu -2 310 1 834 161 103 203 chr10 131663227 131663465 -13925823 + AluJo SINE Alu 125 323 0 230 253 0 60 chr10 131663469 131663552 -13925736 + L1MEc LINE L1 1914 1991 -4549 2251 104 10 7 chr10 131663563 131663871 -13925417 + AluSc SINE Alu 1 309 0 332 269 66 30 chr10 131663908 131664075 -13925213 + L1MEc LINE L1 2134 2306 -4415 1093 214 66 52 chr10 131664080 131664278 -13925010 + L1MEc LINE L1 3285 3479 -3061 2135 95 3 20 chr10 131664278 131664572 -13924716 + AluSg SINE Alu 1 289 -21 1093 214 66 52 chr10 131664572 131664847 -13924441 + L1MEc LINE L1 3479 3749 -2791 2107 97 4 0 chr10 131664847 131665116 -13924172 + AluSc SINE Alu 17 286 -23 194 0 39 0 chr10 131665119 131665145 -13924143 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1093 214 66 52 chr10 131665145 131665199 -13924089 + L1MEc LINE L1 3750 3924 -2616 935 246 143 18 chr10 131665191 131665577 -13923711 + L1ME2 LINE L1 5721 6154 -10 * 1761 148 11 0 chr10 131665740 131666010 -13923278 + AluJb SINE Alu 34 306 -6 270 0 0 0 chr10 131668164 131668194 -13921094 + (CA)n Simple_repeat Simple_repeat 2 31 0 1229 224 177 53 chr10 131669206 131669868 -13919420 - L1MC4 LINE L1 -2 8040 7297 182 154 103 0 chr10 131670165 131670204 -13919084 - MER5B DNA MER1_type -134 44 2 1026 185 11 26 chr10 131670211 131670400 -13918888 + MER5A DNA MER1_type 4 189 0 1444 143 0 42 chr10 131670632 131670891 -13918397 - AluJo SINE Alu -19 293 46 2163 107 0 4 chr10 131670914 131671195 -13918093 + AluSx SINE Alu 1 280 -32 456 253 95 38 chr10 131671246 131671404 -13917884 + MER68 LTR ERV1 396 562 0 1909 215 83 34 chr10 131671408 131672330 -13916958 - L1ME1 LINE L1 -332 5834 4857 2494 65 10 0 chr10 131672339 131672648 -13916640 + AluSx SINE Alu 1 312 0 435 163 62 0 chr10 131672667 131672747 -13916541 + L1MB4 LINE L1 5844 5928 -252 1654 196 91 50 chr10 131672764 131673249 -13916039 + MLT1D LTR MaLR 1 505 0 2163 210 185 56 chr10 131673254 131674169 -13915119 - L1ME1 LINE L1 -2734 3412 2380 1550 127 5 0 chr10 131674199 131674411 -13914877 + AluSx SINE Alu 1 213 -99 2944 168 34 31 chr10 131674411 131674683 -13914605 + L1MB7 LINE L1 5550 5820 -364 1728 153 0 51 chr10 131674683 131674997 -13914291 + AluJo SINE Alu 1 298 -14 2944 168 34 31 chr10 131674997 131675233 -13914055 + L1MB7 LINE L1 5820 6063 -121 2316 107 0 0 chr10 131675233 131675531 -13913757 + AluSx SINE Alu 1 298 -14 2944 168 34 31 chr10 131675531 131675634 -13913654 + L1MB7 LINE L1 6063 6164 -20 1505 114 5 5 chr10 131675652 131675863 -13913425 + AluSg/x SINE Alu 83 293 -19 2263 97 0 6 chr10 131675900 131676211 -13913077 + AluSg SINE Alu 1 309 -1 435 284 65 35 chr10 131676724 131676893 -13912395 + MER97c DNA MER1_type? 1 174 -916 2014 141 0 3 chr10 131677032 131677336 -13911952 + AluSx SINE Alu 1 303 -9 419 298 168 49 chr10 131677406 131678045 -13911243 - L2 LINE L2 -5 3267 2561 2096 108 42 20 chr10 131678053 131678181 -13911107 + AluSq SINE Alu 1 125 -188 2197 123 0 0 chr10 131678181 131678474 -13910814 + AluSg SINE Alu 1 293 -17 2096 108 42 20 chr10 131678474 131678651 -13910637 + AluSq SINE Alu 125 313 0 966 168 95 0 chr10 131678766 131678956 -13910332 + MER3 DNA MER1_type 1 208 -1 2325 66 7 3 chr10 131679057 131679346 -13909942 + AluSc SINE Alu 2 291 -18 325 285 103 78 chr10 131681076 131681603 -13907685 + L1M2 LINE L1 555 947 -5902 232 169 26 26 chr10 131681784 131681861 -13907427 + (CGCGG)n Simple_repeat Simple_repeat 5 81 0 277 128 43 0 chr10 131682538 131682585 -13906703 + MER57A LTR ERV1 288 336 -67 1358 200 143 0 chr10 131682778 131683230 -13906058 - MER34B LTR ERV1 0 565 127 2275 113 29 63 chr10 131683230 131683311 -13905977 - MER47A DNA MER2_type -1957 366 284 2281 89 0 0 chr10 131683311 131683602 -13905686 + AluSc SINE Alu 1 291 -18 2275 113 29 63 chr10 131683602 131683899 -13905389 - MER47A DNA MER2_type -2039 284 1 1358 200 143 0 chr10 131683899 131684009 -13905279 - MER34B LTR ERV1 -438 127 36 976 202 108 62 chr10 131684327 131684817 -13904471 - MER39 LTR ERV1 0 707 2 1048 180 0 0 chr10 131685001 131685162 -13904126 + FRAM SINE Alu 1 161 -5 2214 99 0 13 chr10 131685344 131685656 -13903632 + AluY SINE Alu 1 308 -3 269 314 29 0 chr10 131685675 131685745 -13903543 - L2 LINE L2 -58 3214 3143 1475 173 43 151 chr10 131685838 131686214 -13903074 + MSTD LTR MaLR 1 323 -73 2294 84 3 0 chr10 131686214 131686501 -13902787 - AluSp SINE Alu -25 288 1 1475 173 43 151 chr10 131686501 131686568 -13902720 + MSTD LTR MaLR 323 396 0 942 226 39 69 chr10 131686653 131687060 -13902228 + HAL1 LINE L1 2001 2395 -112 439 268 49 8 chr10 131687127 131687250 -13902038 + L2 LINE L2 3184 3311 -2 439 333 45 20 chr10 131687255 131687456 -13901832 - HAL1 LINE L1 -523 1984 1779 355 312 0 0 chr10 131687588 131687681 -13901607 + MLT1J LTR MaLR 104 196 -315 787 168 32 0 chr10 131687688 131687813 -13901475 - FLAM_C SINE Alu -13 130 2 375 157 14 0 chr10 131688076 131688146 -13901142 - MER92C LTR ERV1 0 554 484 341 296 0 11 chr10 131688246 131688334 -13900954 - MER92C LTR ERV1 -438 116 30 301 235 37 12 chr10 131688325 131688406 -13900882 - MER89 LTR ERV1 -280 279 197 * 356 119 0 178 chr10 131688381 131688440 -13900848 - MER89 LTR ERV1 -472 87 52 1817 153 39 0 chr10 131688440 131688722 -13900566 + AluJb SINE Alu 2 294 -18 356 119 0 178 chr10 131688722 131688763 -13900525 - MER89 LTR ERV1 -507 52 5 333 217 12 0 chr10 131688766 131688849 -13900439 - MER33 DNA MER1_type -13 350 267 1399 117 0 19 chr10 131688849 131689054 -13900234 - AluSg/x SINE Alu -11 301 101 432 94 0 0 chr10 131689054 131689107 -13900181 - Alu SINE Alu -259 54 2 975 185 36 17 chr10 131689110 131689347 -13899941 - MER33 DNA MER1_type -91 233 1 1024 184 69 28 chr10 131689639 131689857 -13899431 + AluJb SINE Alu 85 311 -1 2259 114 10 0 chr10 131689959 131690258 -13899030 - AluSx SINE Alu -10 302 1 1798 149 55 0 chr10 131690274 131690427 -13898861 - AluJb SINE Alu -22 290 147 192 77 0 0 chr10 131690427 131690453 -13898835 + (TTTTA)n Simple_repeat Simple_repeat 3 28 0 1798 149 55 0 chr10 131690453 131690574 -13898714 - AluJb SINE Alu -165 147 1 2389 130 40 90 chr10 131690630 131690781 -13898507 - MSTB LTR MaLR 0 426 269 2455 75 0 28 chr10 131690781 131691101 -13898187 + AluY SINE Alu 1 311 0 2389 130 40 90 chr10 131691101 131691199 -13898089 - MSTB LTR MaLR -157 269 168 2081 66 66 4 chr10 131691199 131691470 -13897818 - AluY SINE Alu -1 310 23 2389 130 40 90 chr10 131691470 131691664 -13897624 - MSTB LTR MaLR -258 168 4 270 311 56 0 chr10 131692193 131692283 -13897005 + MLT1J LTR MaLR 103 197 -314 437 178 0 0 chr10 131692503 131692576 -13896712 + MER67D LTR ERV1 87 159 -355 1471 93 5 0 chr10 131692577 131692771 -13896517 + LTR12 LTR ERV1 80 274 -440 342 263 10 0 chr10 131692775 131692874 -13896414 + LTR30 LTR ERV1 544 643 -79 23852 98 17 10 chr10 131692874 131697770 -13891518 + Harlequin LTR ERV1 1 4944 -2001 2225 180 112 54 chr10 131697782 131698551 -13890737 + Harlequin LTR ERV1 843 1720 -5176 * 4688 102 5 0 chr10 131698546 131699186 -13890102 + Harlequin LTR ERV1 7757 8399 0 275 231 0 0 chr10 131699186 131699238 -13890050 + LTR30 LTR ERV1 1 52 -670 1439 97 14 142 chr10 131699238 131699553 -13889735 + LTR12 LTR ERV1 57 2032 -406 315 239 34 0 chr10 131699554 131699642 -13889646 + LTR30 LTR ERV1 553 643 -79 746 90 0 0 chr10 131699644 131699744 -13889544 + LTR12 LTR ERV1 615 714 0 318 214 198 43 chr10 131699746 131699933 -13889355 + MER67C LTR ERV1 188 403 -307 * 413 249 31 6 chr10 131699902 131700117 -13889171 + MER67D LTR ERV1 273 528 -15 1405 148 102 14 chr10 131700418 131700701 -13888587 - AluJb SINE Alu -2 310 3 2163 96 10 19 chr10 131700729 131701043 -13888245 + AluY SINE Alu 1 311 0 2291 81 0 0 chr10 131702400 131702683 -13886605 - AluSx SINE Alu -8 304 22 604 212 201 0 chr10 131702852 131703041 -13886247 + MIR SINE MIR 8 234 -28 581 269 96 30 chr10 131703277 131703474 -13885814 + L2 LINE L2 3103 3312 -1 345 24 0 0 chr10 131703777 131703819 -13885469 + (TG)n Simple_repeat Simple_repeat 1 42 0 2065 104 28 7 chr10 131703984 131704271 -13885017 + AluSx SINE Alu 1 293 -19 284 217 121 12 chr10 131704272 131704355 -13884933 - L2 LINE L2 -14 3299 3208 264 314 51 34 chr10 131705072 131705190 -13884098 + L2 LINE L2 3190 3309 -4 398 306 60 54 chr10 131705198 131705512 -13883776 - L2 LINE L2 -814 2500 2185 2359 89 0 22 chr10 131706598 131706914 -13882374 + AluSx SINE Alu 1 309 -3 246 205 68 87 chr10 131706964 131707125 -13882163 + L1ME4a LINE L1 5927 6084 -37 393 232 48 82 chr10 131708677 131708830 -13880458 - L1MD3 LINE L1 0 8029 7881 190 232 12 24 chr10 131708846 131708928 -13880360 + C-rich Low_complexity Low_complexity 2 82 0 432 294 29 12 chr10 131708937 131709107 -13880181 - L1MC4 LINE L1 -119 7923 7751 303 203 0 0 chr10 131709130 131709194 -13880094 + (TATATG)n Simple_repeat Simple_repeat 3 66 0 1682 178 0 11 chr10 131709197 131709473 -13879815 - AluJo SINE Alu -19 293 21 972 150 0 13 chr10 131709484 131709637 -13879651 - FRAM SINE Alu -23 153 3 22 0 0 0 chr10 131709652 131709674 -13879614 + AT_rich Low_complexity Low_complexity 1 22 0 1351 186 75 34 chr10 131709887 131710182 -13879106 - AluJo SINE Alu 0 312 6 21 57 0 0 chr10 131710195 131710230 -13879058 + AT_rich Low_complexity Low_complexity 1 35 0 368 105 0 195 chr10 131710395 131710513 -13878775 - L1ME1 LINE L1 0 6178 6077 1836 98 18 14 chr10 131710560 131710836 -13878452 - AluSx SINE Alu -1 311 35 331 268 8 31 chr10 131710950 131711077 -13878211 + CT-rich Low_complexity Low_complexity 4 127 0 2158 116 3 0 chr10 131711230 131711524 -13877764 + AluSx SINE Alu 1 295 -17 746 214 39 7 chr10 131711524 131711678 -13877610 + MER58B DNA MER1_type 181 339 -2 2133 149 34 60 chr10 131711833 131712084 -13877204 + L1MA4 LINE L1 5896 6133 -167 2367 101 0 0 chr10 131712084 131712390 -13876898 + AluSx SINE Alu 5 310 -2 2133 149 34 60 chr10 131712390 131712554 -13876734 + L1MA4 LINE L1 6133 6300 0 994 163 0 0 chr10 131712588 131712741 -13876547 + AluJo SINE Alu 1 153 -159 1953 167 3 0 chr10 131713246 131713552 -13875736 + AluJb SINE Alu 1 307 -5 869 145 0 15 chr10 131713595 131713726 -13875562 + FLAM_C SINE Alu 1 129 -4 21 36 0 0 chr10 131713726 131713754 -13875534 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr10 131713957 131713992 -13875296 + AT_rich Low_complexity Low_complexity 1 35 0 1817 146 7 17 chr10 131714036 131714338 -13874950 + AluJo SINE Alu 1 299 -13 265 282 162 26 chr10 131714561 131714678 -13874610 - MIR SINE MIR -27 235 103 966 236 39 0 chr10 131714818 131715026 -13874262 + MER58A DNA MER1_type 9 224 0 1711 168 39 0 chr10 131715120 131715406 -13873882 - AluJo SINE Alu -15 297 1 1197 171 88 21 chr10 131715420 131715660 -13873628 - AluJb SINE Alu -20 292 37 2009 177 88 26 chr10 131716217 131716658 -13872630 - MLT1C LTR MaLR -1 459 1 1018 201 20 0 chr10 131716849 131717048 -13872240 + MER2 DNA MER2_type 2 204 -141 2153 125 0 3 chr10 131717049 131717352 -13871936 - AluSx SINE Alu -10 302 1 359 191 44 15 chr10 131717374 131717442 -13871846 + MER2 DNA MER2_type 273 342 -3 2165 117 7 0 chr10 131717714 131718005 -13871283 - AluSx SINE Alu -19 293 1 1911 133 7 13 chr10 131718145 131718446 -13870842 + AluSx SINE Alu 1 299 -13 600 255 107 67 chr10 131718481 131718719 -13870569 - L1M4 LINE L1 -1394 4752 4525 2030 144 0 19 chr10 131718719 131719031 -13870257 - AluJb SINE Alu -6 306 1 600 255 107 67 chr10 131719031 131719391 -13869897 - L1M4 LINE L1 -1621 4525 4130 195 204 0 0 chr10 131719832 131719876 -13869412 + (CATATA)n Simple_repeat Simple_repeat 3 46 0 1755 168 0 7 chr10 131719877 131720174 -13869114 - AluJb SINE Alu -17 295 1 1924 134 17 3 chr10 131721006 131721296 -13867992 + AluSx SINE Alu 2 295 -17 350 244 47 8 chr10 131721533 131721660 -13867628 + MER103 DNA DNA 34 165 -1 1009 76 0 42 chr10 131722400 131722544 -13866744 + L1MA3 LINE L1 6168 6305 0 1931 122 39 0 chr10 131722664 131722950 -13866338 - AluSp SINE Alu -16 297 1 255 100 25 0 chr10 131723092 131723132 -13866156 - Alu SINE Alu -262 41 1 281 141 0 155 chr10 131723186 131723210 -13866078 - MER58A DNA MER1_type -273 68 42 2187 93 0 28 chr10 131723210 131723524 -13865764 + AluSq SINE Alu 1 306 0 281 141 0 155 chr10 131723524 131723569 -13865719 - MER58A DNA MER1_type -299 42 9 182 269 0 19 chr10 131724345 131724397 -13864891 - L3 LINE CR1 -1 1576 1526 312 262 106 71 chr10 131724550 131724691 -13864597 - MIR SINE MIR 0 262 117 463 104 0 15 chr10 131725543 131725610 -13863678 - MER20 DNA MER1_type -151 68 3 1715 169 7 7 chr10 131726222 131726501 -13862787 - AluJo SINE Alu -25 287 9 1082 154 6 0 chr10 131726548 131726717 -13862571 - AluSg/x SINE Alu -20 292 123 2220 130 0 0 chr10 131726720 131727019 -13862269 - AluSx SINE Alu -13 299 1 279 0 0 0 chr10 131727939 131727970 -13861318 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 432 191 11 45 chr10 131727972 131728061 -13861227 - FLAM_C SINE Alu -30 113 28 2302 104 0 0 chr10 131728336 131728634 -13860654 - AluSq SINE Alu -15 298 1 1211 281 100 14 chr10 131729285 131729837 -13859451 + L1MC4a LINE L1 5311 5909 -1899 302 250 59 0 chr10 131730504 131730572 -13858716 + MER81 DNA DNA 1 72 -42 566 160 0 10 chr10 131730677 131730777 -13858511 - FLAM_A SINE Alu -6 136 38 329 248 124 9 chr10 131730780 131730893 -13858395 + MIR SINE MIR 92 217 -45 23 54 0 0 chr10 131731055 131731092 -13858196 + AT_rich Low_complexity Low_complexity 1 37 0 194 167 167 0 chr10 131732151 131732199 -13857089 - MIR SINE MIR -50 212 157 2303 98 0 0 chr10 131732894 131733189 -13856099 - AluSx SINE Alu -17 295 1 2130 80 39 11 chr10 131733767 131734053 -13855235 - AluSx SINE Alu -18 294 1 1891 146 4 0 chr10 131734130 131734411 -13854877 - AluJo SINE Alu -24 288 7 882 196 35 133 chr10 131734411 131734727 -13854561 - L1ME2 LINE L1 -32 6132 5848 1812 153 7 3 chr10 131734894 131735182 -13854106 - AluJo SINE Alu -23 289 1 423 284 94 94 chr10 131736179 131736220 -13853068 - L1ME2 LINE L1 -261 5860 5820 1564 195 6 41 chr10 131736220 131736538 -13852750 - AluJo SINE Alu -5 307 1 423 284 94 94 chr10 131736538 131736632 -13852656 - L1ME2 LINE L1 -301 5820 5727 1804 187 63 57 chr10 131736632 131737091 -13852197 - MLT1C LTR MaLR -1 466 5 423 284 94 94 chr10 131737091 131737338 -13851950 - L1ME2 LINE L1 -393 5728 5477 255 239 190 11 chr10 131737464 131737648 -13851640 - L1ME2 LINE L1 -2338 5470 5254 320 355 0 16 chr10 131737798 131737919 -13851369 + MIR3 SINE MIR 3 121 -87 870 234 44 44 chr10 131738205 131738453 -13850835 - MIR SINE MIR 0 262 15 2308 97 0 3 chr10 131738576 131738874 -13850414 - AluY SINE Alu -14 297 1 828 196 0 0 chr10 131739156 131739289 -13849999 - FLAM_C SINE Alu 0 133 1 682 101 71 0 chr10 131740534 131740633 -13848655 + AluSc SINE Alu 195 300 -9 840 175 0 21 chr10 131740696 131740839 -13848449 - FLAM_C SINE Alu -2 141 2 2523 55 0 0 chr10 131740896 131741189 -13848099 - AluY SINE Alu -15 296 4 260 242 37 3 chr10 131743384 131743478 -13845810 - MLT1J LTR MaLR -2 509 427 1285 99 0 0 chr10 131744195 131744357 -13844931 + AluSq SINE Alu 1 162 -151 2252 121 0 0 chr10 131744519 131744817 -13844471 + AluSx SINE Alu 1 298 -14 228 182 0 0 chr10 131744871 131744915 -13844373 + (TCCA)n Simple_repeat Simple_repeat 2 45 0 496 267 168 72 chr10 131744915 131745248 -13844040 - L2 LINE L2 0 3313 2949 471 209 119 15 chr10 131745256 131745390 -13843898 - L1MC4a LINE L1 -1964 5844 5697 611 263 79 75 chr10 131745391 131745618 -13843670 - L1ME4a LINE L1 -296 5825 5600 2004 98 66 11 chr10 131745618 131745905 -13843383 + AluSx SINE Alu 1 303 -9 611 263 79 75 chr10 131745905 131746186 -13843102 - L1ME4a LINE L1 -521 5600 5315 2157 72 43 0 chr10 131746205 131746515 -13842773 - AluY SINE Alu 0 311 1 2264 114 0 0 chr10 131746685 131746992 -13842296 + AluSx SINE Alu 2 308 -4 228 208 42 28 chr10 131747282 131747354 -13841934 + HsTC2 DNA Tc2 3 75 -1823 832 125 108 0 chr10 131747362 131747482 -13841806 + AluJo/FLAM SINE Alu 1 133 -169 825 108 108 0 chr10 131747367 131747487 -13841801 + FLAM_C SINE Alu 6 138 -5 334 264 35 56 chr10 131747511 131747655 -13841633 - L1MEd LINE L1 -5479 640 500 257 200 92 0 chr10 131747850 131747915 -13841373 + HsTC2 DNA Tc2 1830 1900 0 1620 161 6 40 chr10 131748368 131748690 -13840598 + AluJo SINE Alu 1 311 -1 21 0 0 0 chr10 131748719 131748740 -13840548 + AT_rich Low_complexity Low_complexity 1 21 0 1928 119 24 0 chr10 131748740 131749035 -13840253 + AluSg SINE Alu 1 302 -8 1682 158 0 14 chr10 131749043 131749335 -13839953 - AluJb SINE Alu -24 288 1 2269 90 0 0 chr10 131749526 131749825 -13839463 - AluY SINE Alu -12 299 1 369 266 136 43 chr10 131751196 131751380 -13837908 - MIR3 SINE MIR 0 208 8 305 184 13 53 chr10 131751649 131751725 -13837563 - L1MC4 LINE L1 -1335 6707 6635 1335 122 10 5 chr10 131752752 131752957 -13836331 + AluSg/x SINE Alu 106 311 -1 279 229 0 43 chr10 131753318 131753388 -13835900 - L1MC5 LINE L1 -52 7909 7843 1946 93 70 103 chr10 131753401 131753789 -13835499 + THE1C LTR MaLR 1 375 0 186 266 193 28 chr10 131754311 131754420 -13834868 - MIR SINE MIR -18 244 118 295 318 47 0 chr10 131754423 131754508 -13834780 - MIR SINE MIR -110 152 64 1306 148 148 4 chr10 131754712 131754956 -13834332 + AluJo SINE Alu 1 279 -33 996 98 0 0 chr10 131754957 131755089 -13834199 - AluSq/x SINE Alu -180 132 1 1352 141 102 14 chr10 131755117 131755400 -13833888 + AluJb SINE Alu 3 310 -2 422 249 31 6 chr10 131755701 131755916 -13833372 - MER67D LTR ERV1 -15 528 273 339 241 193 37 chr10 131755885 131756072 -13833216 - MER67C LTR ERV1 -307 403 188 * 762 90 0 0 chr10 131756074 131756174 -13833114 - LTR12 LTR ERV1 0 714 615 328 239 34 0 chr10 131756176 131756264 -13833024 - LTR30 LTR ERV1 -79 643 553 1431 103 14 142 chr10 131756265 131756580 -13832708 - LTR12 LTR ERV1 -406 2032 57 281 231 0 0 chr10 131756580 131756632 -13832656 - LTR30 LTR ERV1 -670 52 1 4714 103 5 0 chr10 131756632 131757272 -13832016 - HERV9 LTR ERV1 0 8399 7757 2304 165 187 45 chr10 131757267 131758036 -13831252 - Harlequin LTR ERV1 -5176 1720 843 * 28965 104 22 10 chr10 131758048 131762944 -13826344 - Harlequin LTR ERV1 -2001 437 1 352 263 10 0 chr10 131762944 131763043 -13826245 - LTR30 LTR ERV1 -79 643 544 1470 93 5 0 chr10 131763047 131763241 -13826047 - LTR12 LTR ERV1 -440 274 80 431 178 0 0 chr10 131763242 131763315 -13825973 - MER67D LTR ERV1 -355 159 87 288 300 56 0 chr10 131763535 131763625 -13825663 - MLT1J LTR MaLR -314 197 103 1031 173 62 89 chr10 131764151 131764348 -13824940 + MSTB LTR MaLR 1 202 -255 1916 96 15 0 chr10 131764348 131764620 -13824668 + AluY SINE Alu 23 298 -13 1031 173 62 89 chr10 131764620 131764845 -13824443 + MSTB LTR MaLR 202 404 -53 218 288 0 0 chr10 131765454 131765527 -13823761 + C-rich Low_complexity Low_complexity 1 73 0 1054 92 65 32 chr10 131765678 131765895 -13823393 + AluY SINE Alu 1 224 -87 554 310 56 13 chr10 131766642 131766874 -13822414 + MIR SINE MIR 21 262 0 257 290 0 0 chr10 131767500 131767562 -13821726 - L1ME4a LINE L1 -70 6051 5990 209 296 0 0 chr10 131767704 131767758 -13821530 + MIR SINE MIR 206 259 -3 198 0 0 0 chr10 131769285 131769307 -13819981 + (TTTTA)n Simple_repeat Simple_repeat 4 25 0 1065 137 39 15 chr10 131769453 131769749 -13819539 - L1P5 LINE L1 -703 5451 5148 32 26 0 0 chr10 131770337 131770376 -13818912 + AT_rich Low_complexity Low_complexity 1 39 0 1634 217 62 53 chr10 131770469 131770983 -13818305 + MER39 LTR ERV1 1 698 -9 620 241 115 55 chr10 131771952 131772205 -13817083 + MER46C DNA MER2_type 1 268 -70 1724 209 66 27 chr10 131772220 131772661 -13816627 + MLT1C LTR MaLR 3 460 -7 761 278 47 5 chr10 131772816 131773028 -13816260 + MLT1K LTR MaLR 35 255 -333 871 218 111 97 chr10 131773122 131773420 -13815868 + MLT1K LTR MaLR 281 582 -6 201 234 0 21 chr10 131774029 131774076 -13815212 + L3 LINE CR1 1338 1383 -194 1975 122 0 16 chr10 131774100 131774404 -13814884 + AluSg1 SINE Alu 1 299 -10 818 150 140 35 chr10 131774404 131774604 -13814684 + L1MB7 LINE L1 5964 6184 0 441 0 0 0 chr10 131775329 131775378 -13813910 + (CA)n Simple_repeat Simple_repeat 2 50 0 820 172 16 0 chr10 131775422 131775550 -13813738 + MER2 DNA MER2_type 2 131 -214 2718 112 79 18 chr10 131775551 131775922 -13813366 - Tigger1 DNA MER2_type -1 2417 2013 2234 88 3 10 chr10 131775922 131776228 -13813060 + AluSp SINE Alu 1 304 -9 2718 112 79 18 chr10 131776228 131776301 -13812987 - Tigger1 DNA MER2_type -405 2013 1946 1733 230 60 39 chr10 131776553 131777018 -13812270 + MER77 LTR ERV1 57 531 -74 21 0 0 0 chr10 131777090 131777111 -13812177 + AT_rich Low_complexity Low_complexity 1 21 0 241 43 43 43 chr10 131777437 131777484 -13811804 + (CAAAAA)n Simple_repeat Simple_repeat 2 48 0 235 208 0 0 chr10 131777702 131777755 -13811533 - MLT1J LTR MaLR -33 478 426 2020 104 0 0 chr10 131777944 131778245 -13811043 - AluSc SINE Alu 0 301 1 233 319 44 0 chr10 131779508 131779599 -13809689 + MIR SINE MIR 168 262 0 244 331 17 36 chr10 131779607 131779736 -13809552 + MER5B DNA MER1_type 2 138 -51 1583 171 88 9 chr10 131779992 131780332 -13808956 - LOR1b LTR ERV1 0 461 95 1635 132 0 45 chr10 131782202 131782489 -13806799 - AluSx SINE Alu -38 274 1 502 293 125 30 chr10 131782501 131782900 -13806388 + L1ME3 LINE L1 5525 5961 -201 350 241 25 0 chr10 131782992 131783071 -13806217 + 5S rRNA rRNA 4 84 -37 2233 106 0 3 chr10 131783123 131783434 -13805854 - AluSg SINE Alu 0 310 1 369 43 0 0 chr10 131783770 131783817 -13805471 + (TTCC)n Simple_repeat Simple_repeat 3 49 0 1678 89 58 12 chr10 131786059 131786316 -13802972 - AluSx SINE Alu -43 269 1 1120 239 11 28 chr10 131786316 131786680 -13802608 - L1M4 LINE L1 -1675 4471 4114 187 160 60 80 chr10 131787178 131787228 -13802060 - L2 LINE L2 0 3272 3224 263 282 57 24 chr10 131787282 131787406 -13801882 + LTR33 LTR ERVL 394 521 0 200 238 0 0 chr10 131788955 131788997 -13800291 + (TA)n Simple_repeat Simple_repeat 2 43 0 189 0 0 0 chr10 131789273 131789294 -13799994 + (T)n Simple_repeat Simple_repeat 1 21 0 1417 165 0 55 chr10 131789459 131789732 -13799556 - AluJb SINE Alu -54 258 1 1635 117 25 4 chr10 131789733 131789972 -13799316 + MER4B LTR ERV1 349 592 -18 659 100 0 11 chr10 131789958 131790048 -13799240 + MER4B LTR ERV1 522 610 0 * 1154 167 15 20 chr10 131790048 131790246 -13799042 + LTR32 LTR ERVL 164 360 -111 877 205 0 6 chr10 131790319 131790475 -13798813 + LTR32 LTR ERVL 317 471 0 1942 159 88 0 chr10 131790522 131790861 -13798427 + MER68 LTR ERV1 135 503 -59 748 199 110 4 chr10 131790992 131791228 -13798060 + MER97a DNA MER1_type? 634 894 0 1606 157 4 0 chr10 131791311 131791566 -13797722 - AluJb SINE Alu -28 284 29 410 169 0 13 chr10 131791612 131791689 -13797599 - L1ME2 LINE L1 -264 5900 5825 240 143 0 0 chr10 131791951 131791993 -13797295 + (CA)n Simple_repeat Simple_repeat 2 43 0 1071 240 4 26 chr10 131792005 131792272 -13797016 - MLT2B1 LTR ERVL -258 262 2 1859 146 3 7 chr10 131792272 131792580 -13796708 + AluSx SINE Alu 1 307 -5 791 152 15 26 chr10 131792708 131792974 -13796314 + CT-rich Low_complexity Low_complexity 1 263 0 1478 176 35 17 chr10 131792974 131793264 -13796024 - AluJo SINE Alu -6 306 12 210 350 0 0 chr10 131793591 131793671 -13795617 - MIR SINE MIR -14 248 169 791 265 120 48 chr10 131793919 131794134 -13795154 - L2 LINE L2 0 3313 3115 1847 155 24 0 chr10 131794134 131794431 -13794857 + AluJo SINE Alu 1 304 -8 791 265 120 48 chr10 131794431 131794821 -13794467 - L2 LINE L2 -198 3115 2658 1217 210 111 58 chr10 131794821 131795217 -13794071 - LTR16A LTR ERVL 0 450 34 694 244 41 0 chr10 131795251 131795448 -13793840 - L2 LINE L2 -656 2658 2454 1737 140 3 14 chr10 131795714 131796000 -13793288 + AluJo SINE Alu 4 286 -26 296 348 58 7 chr10 131796274 131796412 -13792876 - MIR SINE MIR -45 217 73 180 258 97 48 chr10 131796418 131796480 -13792808 + MIR SINE MIR 197 261 -1 621 250 127 22 chr10 131796633 131796861 -13792427 + MIR SINE MIR 11 262 0 1992 99 3 71 chr10 131797004 131797327 -13791961 + AluSx SINE Alu 1 301 -11 217 205 0 0 chr10 131797394 131797433 -13791855 + GA-rich Low_complexity Low_complexity 3 41 0 2425 52 16 10 chr10 131798114 131798423 -13790865 + AluY SINE Alu 1 311 0 2095 132 0 3 chr10 131798611 131798914 -13790374 - AluSx SINE Alu -10 302 1 341 268 98 0 chr10 131799310 131799433 -13789855 + MIR SINE MIR 114 248 -14 368 123 6 18 chr10 131799654 131799721 -13789567 - L1M3 LINE L1 -472 5696 5628 918 200 82 20 chr10 131800194 131800449 -13788839 + L1MC4a LINE L1 5693 5963 -1845 642 301 52 78 chr10 131801475 131801769 -13787519 + L1M4 LINE L1 2236 2536 -3610 925 126 0 30 chr10 131801769 131801904 -13787384 + FLAM_C SINE Alu 1 131 -2 642 301 52 78 chr10 131801904 131802245 -13787043 + L1M4 LINE L1 2536 2884 -3262 1995 243 89 40 chr10 131802245 131802842 -13786446 + MLT1E2 LTR MaLR 1 626 0 642 301 52 78 chr10 131802842 131802927 -13786361 + L1M4 LINE L1 2884 2970 -3176 2036 224 117 29 chr10 131802927 131803081 -13786207 - MLT1E LTR MaLR 0 593 454 2013 154 0 0 chr10 131803081 131803379 -13785909 - AluJb SINE Alu -14 298 1 2036 224 117 29 chr10 131803379 131803769 -13785519 - MLT1E LTR MaLR -139 454 1 642 301 52 78 chr10 131803769 131804021 -13785267 + L1M4 LINE L1 2970 3185 -2961 643 212 15 7 chr10 131804177 131804314 -13784974 + MLT1J LTR MaLR 374 511 0 423 289 115 61 chr10 131804319 131805078 -13784210 + L1M4 LINE L1 4186 5023 -1123 1972 146 0 3 chr10 131805078 131805379 -13783909 + AluSx SINE Alu 9 308 -4 423 289 115 61 chr10 131805379 131805707 -13783581 + L1M4 LINE L1 5023 5332 -814 447 289 114 30 chr10 131806160 131806331 -13782957 - L2 LINE L2 -830 2484 2282 4191 115 30 12 chr10 131806331 131806923 -13782365 - LTR26 LTR ERV1 0 603 1 447 289 114 30 chr10 131806923 131807014 -13782274 - L2 LINE L2 -1032 2282 2200 1530 164 31 110 chr10 131807705 131808096 -13781192 - L1MD3 LINE L1 -7 7988 7629 337 264 112 45 chr10 131808171 131808349 -13780939 + L2 LINE L2 3124 3313 0 2346 43 40 20 chr10 131808370 131808669 -13780619 - AluY SINE Alu -6 305 1 446 251 56 45 chr10 131810230 131810409 -13778879 + MLT1J LTR MaLR 290 470 -41 327 309 52 0 chr10 131810870 131810967 -13778321 + MIR SINE MIR 6 107 -155 674 252 7 0 chr10 131810983 131811130 -13778158 + MIR SINE MIR 44 191 -71 206 267 56 112 chr10 131811276 131811437 -13777851 + MIR SINE MIR 98 249 -13 2009 178 92 41 chr10 131811480 131811946 -13777342 + LTR2B LTR ERV1 1 490 0 1092 170 53 73 chr10 131811971 131812218 -13777070 - AluJo SINE Alu -8 304 63 2012 119 20 90 chr10 131812218 131812799 -13776489 - MER51A LTR ERV1 0 634 12 406 171 13 13 chr10 131812799 131812875 -13776413 - AluJo SINE Alu -235 77 2 1323 165 8 12 chr10 131814760 131815008 -13774280 - MLT2B1 LTR ERVL -255 265 19 2297 104 0 0 chr10 131815220 131815518 -13773770 - AluSx SINE Alu -14 298 1 253 167 289 11 chr10 131815904 131815994 -13773294 - L1ME4a LINE L1 0 6121 6007 440 245 54 76 chr10 131817069 131817216 -13772072 - Charlie8 DNA MER1_type -124 217 73 1917 148 3 0 chr10 131817216 131817514 -13771774 + AluSx SINE Alu 1 299 -13 440 245 54 76 chr10 131817514 131817550 -13771738 - Charlie8 DNA MER1_type -268 73 38 2168 110 0 32 chr10 131818266 131818576 -13770712 - AluSx SINE Alu -12 300 1 380 252 9 0 chr10 131819379 131819486 -13769802 - MER113 DNA MER1_type? -409 112 5 595 330 65 4 chr10 131819716 131819946 -13769342 + MIR SINE MIR 19 262 0 2768 102 61 87 chr10 131819984 131820443 -13768845 - MER83 LTR ERV1 0 448 2 214 324 47 81 chr10 131821001 131821149 -13768139 - MIR3 SINE MIR -6 202 60 448 293 0 9 chr10 131821322 131821428 -13767860 + MIR SINE MIR 23 127 -135 183 42 0 0 chr10 131821432 131821456 -13767832 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1601 108 0 84 chr10 131821479 131821730 -13767558 - AluSx SINE Alu -82 230 1 192 245 0 38 chr10 131821893 131821946 -13767342 + L2 LINE L2 3211 3261 -11 4730 134 34 37 chr10 131822238 131822691 -13766597 - L1P4 LINE L1 -387 5778 5325 1533 186 74 0 chr10 131822691 131822976 -13766312 - AluJb SINE Alu -6 306 1 4730 134 34 37 chr10 131822976 131823803 -13765485 - L1P4 LINE L1 -840 5325 4494 2083 172 37 6 chr10 131823846 131824200 -13765088 - MLT1A1 LTR MaLR 0 365 1 1470 188 45 32 chr10 131824209 131824242 -13765046 - AluJb SINE Alu 0 312 281 19112 34 4 0 chr10 131824242 131827187 -13762101 - L1PA4 LINE L1 -3 6152 3199 1470 188 45 32 chr10 131827187 131827461 -13761827 - AluJb SINE Alu -31 281 1 668 298 63 19 chr10 131827954 131828159 -13761129 - MIR SINE MIR -48 214 1 607 97 55 0 chr10 131828712 131828857 -13760431 + (TA)n Simple_repeat Simple_repeat 1 153 0 1477 167 0 4 chr10 131828865 131829104 -13760184 - AluJb SINE Alu -30 282 45 3373 193 100 18 chr10 131831374 131831409 -13757879 + Zaphod DNA AcHobo 44 75 -3956 432 0 0 0 chr10 131831409 131831457 -13757831 + (CA)n Simple_repeat Simple_repeat 2 49 0 3373 193 100 18 chr10 131831457 131832293 -13756995 + Zaphod DNA AcHobo 75 986 -3045 1174 163 85 51 chr10 131832285 131832335 -13756953 + Zaphod DNA AcHobo 3587 3634 -397 * 1524 145 72 33 chr10 131832335 131832611 -13756677 - AluJo SINE Alu -25 287 1 1174 163 85 51 chr10 131832611 131832854 -13756434 + Zaphod DNA AcHobo 3634 3890 -141 9240 149 44 7 chr10 131832857 131834309 -13754979 - L1PBa LINE L1 -2268 4594 3198 2432 84 0 3 chr10 131834309 131834617 -13754671 - AluY SINE Alu -4 307 1 9240 149 44 7 chr10 131834617 131836142 -13753146 - L1PBa LINE L1 -3664 3198 1502 5927 175 22 9 chr10 131836871 131837797 -13751491 - L1M LINE L1 -815 5331 4396 189 0 0 0 chr10 131837797 131837818 -13751470 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 5927 175 22 9 chr10 131837818 131838094 -13751194 - L1M LINE L1 -1750 4396 4125 1584 200 161 9 chr10 131838087 131838759 -13750529 - L1ME LINE L1 -642 5524 4748 * 2108 121 7 23 chr10 131839596 131839902 -13749386 - AluSx SINE Alu -11 301 1 366 23 0 0 chr10 131840453 131840496 -13748792 + (TG)n Simple_repeat Simple_repeat 1 43 0 296 236 0 0 chr10 131840565 131840620 -13748668 - MIR SINE MIR -66 142 88 3010 146 72 12 chr10 131840721 131841207 -13748081 - MLT2B2 LTR ERVL 0 515 1 411 243 36 9 chr10 131841305 131841416 -13747872 + MER81 DNA DNA 1 114 0 884 262 17 34 chr10 131841811 131842048 -13747240 + MIR SINE MIR 17 249 -13 2864 170 45 4 chr10 131842965 131843448 -13745840 - MLT2B1 LTR ERVL -17 503 1 1662 223 147 12 chr10 131843563 131843971 -13745317 - MLT1C LTR MaLR -4 463 1 425 270 146 66 chr10 131843981 131844344 -13744944 + MLT1K LTR MaLR 196 587 -1 651 278 169 42 chr10 131844861 131845364 -13743924 - MLT1L LTR MaLR -10 605 39 21 82 0 0 chr10 131845583 131845632 -13743656 + AT_rich Low_complexity Low_complexity 1 49 0 1244 265 137 34 chr10 131845649 131846528 -13742760 + L1M4 LINE L1 3001 3969 -2177 2130 141 0 0 chr10 131846703 131847008 -13742280 - AluSq SINE Alu -8 305 1 310 306 35 41 chr10 131847011 131847181 -13742107 - L1MC4a LINE L1 -1871 5937 5769 287 299 55 8 chr10 131847705 131847832 -13741456 + MIR SINE MIR 56 188 -74 246 309 25 0 chr10 131848702 131848783 -13740505 + L2 LINE L2 3227 3309 -4 1826 174 9 19 chr10 131849120 131849330 -13739958 - MLT1C LTR MaLR -55 412 204 2772 128 23 23 chr10 131849330 131849758 -13739530 - MSTA LTR MaLR 0 428 1 1826 174 9 19 chr10 131849758 131849863 -13739425 - MLT1C LTR MaLR -263 204 100 935 135 0 8 chr10 131849869 131850002 -13739286 + FRAM SINE Alu 20 151 -25 398 150 0 0 chr10 131850003 131850063 -13739225 - MLT1C LTR MaLR -375 92 33 252 0 0 0 chr10 131851172 131851200 -13738088 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 1512 122 134 4 chr10 131853019 131853257 -13736031 + AluSx SINE Alu 31 299 -13 5365 130 33 45 chr10 131854824 131854836 -13734452 + L1MA9 LINE L1 4808 4819 -1493 1492 158 12 0 chr10 131854836 131855095 -13734193 - L1MB5 LINE L1 -6 6168 5907 5365 130 33 45 chr10 131855095 131856440 -13732848 + L1MA9 LINE L1 4819 6137 -175 219 36 0 0 chr10 131856440 131856468 -13732820 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 836 176 0 0 chr10 131856468 131856587 -13732701 - FLAM_C SINE Alu -24 119 1 848 139 61 33 chr10 131856588 131856768 -13732520 + L1MA9 LINE L1 6128 6312 0 1111 153 10 24 chr10 131856795 131857004 -13732284 - L1MB5 LINE L1 -252 5922 5717 2338 145 6 11 chr10 131857272 131857638 -13731650 + THE1B LTR MaLR 1 364 0 574 282 46 0 chr10 131858770 131858944 -13730344 + MIR SINE MIR 32 213 -49 2225 99 3 3 chr10 131859598 131859892 -13729396 + AluSx SINE Alu 11 304 -8 267 243 71 0 chr10 131859946 131860016 -13729272 + MLT1K LTR MaLR 509 583 -5 198 0 0 0 chr10 131861629 131861651 -13727637 + (TG)n Simple_repeat Simple_repeat 2 23 0 274 275 58 29 chr10 131862100 131862238 -13727050 - MLT1K LTR MaLR -27 561 420 629 281 117 16 chr10 131863026 131863102 -13726186 - L2 LINE L2 -2326 988 921 850 226 194 16 chr10 131863102 131863412 -13725876 - MLT1A1 LTR MaLR 0 365 1 629 281 117 16 chr10 131863412 131863702 -13725586 - L2 LINE L2 -2393 921 585 701 232 122 93 chr10 131863948 131864496 -13724792 + MER34B LTR ERV1 1 564 -1 984 178 88 36 chr10 131864563 131864900 -13724388 - MSTD LTR MaLR 0 396 3 680 180 22 22 chr10 131865899 131866038 -13723250 + AluJo SINE Alu 117 255 -57 399 157 0 0 chr10 131866533 131866603 -13722685 + GA-rich Low_complexity Low_complexity 3 72 0 451 329 87 17 chr10 131867045 131867276 -13722012 - MIR SINE MIR -12 250 4 348 297 88 58 chr10 131867603 131868014 -13721274 - L1ME LINE L1 -4842 1698 1276 332 266 70 26 chr10 131868525 131868701 -13720587 - L1ME LINE L1 -5886 644 462 2853 60 11 6 chr10 131869835 131870188 -13719100 - THE1C LTR MaLR 0 375 21 315 103 224 0 chr10 131870216 131870274 -13719014 - THE1C LTR MaLR -304 71 1 188 403 16 8 chr10 131870612 131870741 -13718547 + MIR SINE MIR 18 147 -61 822 92 33 0 chr10 131870746 131870866 -13718422 + L1MA8 LINE L1 6165 6288 -3 1601 160 59 7 chr10 131871013 131871301 -13717987 - AluJo SINE Alu -9 303 1 2360 71 14 0 chr10 131871523 131871817 -13717471 + AluY SINE Alu 1 298 -13 702 167 53 0 chr10 131871817 131871931 -13717357 - AluJo/FLAM SINE Alu -192 120 1 273 282 39 0 chr10 131872122 131872200 -13717088 + MIR SINE MIR 63 143 -65 475 288 153 36 chr10 131872724 131872810 -13716478 - L1ME LINE L1 -348 5773 5698 2541 77 0 3 chr10 131872810 131873120 -13716168 - AluSx SINE Alu -3 309 1 475 288 153 36 chr10 131873120 131873446 -13715842 - L1ME LINE L1 -423 5698 5313 1142 61 0 0 chr10 131874251 131874383 -13714905 + AluSq/x SINE Alu 1 132 -180 1408 148 148 4 chr10 131874384 131874628 -13714660 - AluJo SINE Alu -33 279 1 260 318 47 0 chr10 131874832 131874917 -13714371 + MIR SINE MIR 64 152 -110 1939 93 70 103 chr10 131875551 131875939 -13713349 - THE1C LTR MaLR 0 375 1 280 232 16 35 chr10 131875952 131876044 -13713244 + L1MC5 LINE L1 7843 7995 0 1414 122 10 5 chr10 131876383 131876588 -13712700 - AluSg/x SINE Alu -1 311 106 1988 113 7 45 chr10 131877711 131878020 -13711268 + AluY SINE Alu 1 297 -14 2389 92 48 31 chr10 131878619 131878977 -13710311 + THE1B LTR MaLR 1 364 0 21 0 0 0 chr10 131878980 131879001 -13710287 + AT_rich Low_complexity Low_complexity 1 21 0 298 165 25 13 chr10 131879850 131879929 -13709359 + G-rich Low_complexity Low_complexity 4 83 0 1707 179 60 0 chr10 131880087 131880406 -13708882 + MER44D DNA MER2_type 2 609 0 491 183 11 0 chr10 131880999 131881092 -13708196 - L1MD2 LINE L1 -12 6347 6254 593 210 32 70 chr10 131881121 131881211 -13708077 - L1MD2 LINE L1 -214 6145 6062 1815 176 62 28 chr10 131881211 131881564 -13707724 + MLT1A1 LTR MaLR 1 365 0 593 210 32 70 chr10 131881564 131881630 -13707658 - L1MD2 LINE L1 -297 6062 5995 1979 109 23 53 chr10 131881649 131881952 -13707336 - AluSg SINE Alu -16 294 1 431 315 73 45 chr10 131881980 131882361 -13706927 - L1MC4a LINE L1 -1897 5911 5520 561 187 19 9 chr10 131882512 131882617 -13706671 - MLT1C LTR MaLR 0 467 362 244 200 0 0 chr10 131882617 131882662 -13706626 + Alu SINE Alu 1 45 -258 327 188 16 0 chr10 131882843 131882907 -13706381 + LTR49 LTR ERV1 317 381 -241 885 204 186 34 chr10 131882907 131883171 -13706117 - LOR1a LTR ERV1 0 497 194 401 82 0 55 chr10 131883172 131883245 -13706043 - LOR1a LTR ERV1 -191 306 238 835 181 190 56 chr10 131883324 131883540 -13705748 + LTR49 LTR ERV1 378 595 0 514 245 35 95 chr10 131883837 131884037 -13705251 + MER92C LTR ERV1 1 188 -366 2114 142 0 0 chr10 131884066 131884361 -13704927 - AluSx SINE Alu -14 298 4 1842 193 86 70 chr10 131884441 131885113 -13704175 - LTR48 LTR ERV1 0 644 1 246 246 46 0 chr10 131885632 131885697 -13703591 - MER92C LTR ERV1 -3 551 484 259 149 27 162 chr10 131885794 131885868 -13703420 - MER92B LTR ERV1 -572 64 1 2671 161 34 75 chr10 131886890 131887133 -13702155 - MER34B LTR ERV1 0 565 314 2027 193 16 8 chr10 131887133 131887517 -13701771 + L1PA15 LINE L1 5779 6165 0 2671 161 34 75 chr10 131887517 131887858 -13701430 - MER34B LTR ERV1 -251 314 5 521 303 32 16 chr10 131887892 131888077 -13701211 - MIR SINE MIR -50 212 25 772 225 118 0 chr10 131888329 131888498 -13700790 - MER5A DNA MER1_type 0 189 1 564 225 77 110 chr10 131888813 131889153 -13700135 + MLT1H LTR MaLR 81 548 -1 1946 159 0 3 chr10 131890035 131890336 -13698952 + AluSx SINE Alu 1 300 -12 3131 183 65 25 chr10 131890339 131891012 -13698276 + MER21B LTR ERV1 15 714 -149 979 143 7 0 chr10 131891023 131891170 -13698118 - AluJo SINE Alu -164 148 1 2375 88 0 31 chr10 131891197 131891517 -13697771 - AluSg SINE Alu 0 310 1 369 227 0 0 chr10 131891518 131891593 -13697695 - MER5A DNA MER1_type -114 75 1 720 194 49 7 chr10 131891932 131892076 -13697212 + MER77 LTR ERV1 41 190 -415 301 284 0 0 chr10 131892329 131892396 -13696892 - MER52A LTR ERV1 -1688 67 1 1606 204 74 0 chr10 131892396 131892719 -13696569 - MLT1A1 LTR MaLR -18 347 1 1094 238 44 10 chr10 131892719 131893077 -13696211 + MER77 LTR ERV1 179 599 -6 2793 123 19 5 chr10 131893422 131893844 -13695444 - MSTA LTR MaLR 0 428 1 944 259 43 36 chr10 131893863 131894277 -13695011 - L1MC5 LINE L1 -36 7925 7509 606 267 10 26 chr10 131894293 131894488 -13694800 - L1ME1 LINE L1 -5 6161 5970 6769 126 51 41 chr10 131895050 131895328 -13693960 - Tigger3b DNA MER2_type -1797 1231 957 2119 98 33 20 chr10 131895328 131895633 -13693655 + AluSc SINE Alu 1 309 0 6769 126 51 41 chr10 131895633 131896215 -13693073 - Tigger3b DNA MER2_type -2071 957 382 2043 83 7 83 chr10 131896215 131896542 -13692746 - AluSg SINE Alu 0 306 3 6769 126 51 41 chr10 131896542 131896819 -13692469 - Tigger3b DNA MER2_type -2646 382 77 2581 64 0 0 chr10 131896819 131897117 -13692171 - AluY SINE Alu -13 298 1 6769 126 51 41 chr10 131897117 131897194 -13692094 - Tigger3b DNA MER2_type -2951 77 2 291 28 0 0 chr10 131897474 131897510 -13691778 + (TG)n Simple_repeat Simple_repeat 2 37 0 2433 60 0 0 chr10 131897689 131897988 -13691300 + L1PA7 LINE L1 5666 5964 -190 519 175 92 0 chr10 131898088 131898208 -13691080 - MER34 LTR ERV1 -411 131 1 414 286 143 20 chr10 131898259 131898455 -13690833 + MIR SINE MIR 31 250 -12 2132 110 4 0 chr10 131899520 131899846 -13689442 - AluSg SINE Alu 0 327 1 2238 112 30 0 chr10 131900129 131900432 -13688856 + AluSx SINE Alu 1 312 0 262 282 94 43 chr10 131900505 131900622 -13688666 - L2 LINE L2 -8 3305 3183 787 258 48 99 chr10 131900975 131901202 -13688086 - MER34 LTR ERV1 -3 539 302 6117 167 16 24 chr10 131901202 131902745 -13686543 - L1PA12 LINE L1 0 6168 4614 1827 167 0 0 chr10 131902745 131903014 -13686274 + AluSx SINE Alu 1 269 -43 180 77 0 0 chr10 131903020 131903046 -13686242 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 6117 167 16 24 chr10 131903046 131903513 -13685775 - L1PA12 LINE L1 -1559 4609 4174 787 258 48 99 chr10 131903513 131903852 -13685436 - MER34 LTR ERV1 -240 302 2 * 1059 267 141 28 chr10 131903852 131904269 -13685019 + MLT1J LTR MaLR 46 511 0 1097 248 35 40 chr10 131904718 131904735 -13684553 - MER93b LTR ERV1 -4 369 353 1393 153 129 20 chr10 131904735 131904990 -13684298 + AluJo SINE Alu 1 283 -29 1097 248 35 40 chr10 131904990 131905343 -13683945 - MER93b LTR ERV1 -20 353 1 452 287 19 0 chr10 131905347 131905455 -13683833 - MER81 DNA DNA -3 111 2 181 254 102 0 chr10 131906128 131906187 -13683101 + L2 LINE L2 3123 3187 -85 330 268 146 0 chr10 131906312 131906435 -13682853 + MIR SINE MIR 108 248 -14 816 193 26 86 chr10 131906902 131907135 -13682153 - MER20 DNA MER1_type 0 219 1 398 184 0 0 chr10 131907286 131907354 -13681934 - FLAM SINE Alu -8 125 65 948 174 0 7 chr10 131907396 131907551 -13681737 - FRAM SINE Alu -10 166 13 258 324 0 0 chr10 131907948 131908022 -13681266 + C-rich Low_complexity Low_complexity 4 77 0 588 317 92 34 chr10 131908335 131908887 -13680401 + L1M4 LINE L1 3190 3773 -2373 2425 71 30 76 chr10 131908915 131909321 -13679967 - L1PB3 LINE L1 -250 5904 5518 399 269 168 19 chr10 131909396 131909664 -13679624 + L1M4 LINE L1 3826 4133 -2013 2390 87 0 13 chr10 131909774 131910083 -13679205 + AluY SINE Alu 1 305 -6 187 369 80 11 chr10 131910292 131910479 -13678809 - MIR3 SINE MIR -7 201 2 21 36 0 0 chr10 131910503 131910531 -13678757 + AT_rich Low_complexity Low_complexity 1 28 0 371 113 16 0 chr10 131911250 131911312 -13677976 + (GGAA)n Simple_repeat Simple_repeat 3 65 0 932 53 0 0 chr10 131911608 131911722 -13677566 - L1PA7 LINE L1 -2 6152 6039 1209 238 37 79 chr10 131911851 131912359 -13676929 + MER34 LTR ERV1 56 542 0 539 331 89 48 chr10 131914686 131914930 -13674358 + L3 LINE CR1 120 352 -1225 2273 103 0 13 chr10 131914930 131915231 -13674057 - AluSq SINE Alu -16 297 1 539 331 89 48 chr10 131915231 131915470 -13673818 + L3 LINE CR1 352 623 -954 1289 206 93 83 chr10 131915881 131916540 -13672748 - L1MC5 LINE L1 -31 7930 7266 571 188 30 23 chr10 131916543 131916676 -13672612 - L1MC5 LINE L1 -740 7221 7088 556 197 118 8 chr10 131916710 131916837 -13672451 - MLT1J1 LTR MaLR -305 141 1 391 310 212 34 chr10 131916844 131916881 -13672407 + L3 LINE CR1 792 821 -756 2279 190 46 62 chr10 131916881 131917444 -13671844 - MLT2B3 LTR ERVL 0 554 1 391 310 212 34 chr10 131917444 131917968 -13671320 + L3 LINE CR1 821 1453 -124 5118 136 31 39 chr10 131918216 131919152 -13670136 - L1MA10 LINE L1 0 6334 5406 672 139 73 0 chr10 131919259 131919396 -13669892 - L1MA8 LINE L1 0 6291 6145 486 236 120 60 chr10 131920154 131920370 -13668918 + MIR SINE MIR 34 262 0 270 136 0 0 chr10 131920854 131920898 -13668390 + (T)n Simple_repeat Simple_repeat 1 44 0 379 233 32 108 chr10 131921340 131921589 -13667699 - LTR16A1 LTR ERVL -11 446 217 1029 235 185 32 chr10 131921917 131922203 -13667085 + MER34C LTR ERV1 1 242 -343 2611 115 65 2 chr10 131922203 131922604 -13666684 - MSTB LTR MaLR 0 426 1 1029 235 185 32 chr10 131922604 131922824 -13666464 + MER34C LTR ERV1 242 585 0 198 0 0 0 chr10 131923614 131923636 -13665652 + (A)n Simple_repeat Simple_repeat 1 22 0 1150 256 71 19 chr10 131923671 131923995 -13665293 - MLT1J LTR MaLR -71 440 100 251 125 0 25 chr10 131923961 131924001 -13665287 - LTR67 LTR ERVL -420 137 99 * 1187 150 33 5 chr10 131924277 131924490 -13664798 - L1M4 LINE L1 -360 5818 5600 623 253 28 16 chr10 131924496 131924678 -13664610 - MIR SINE MIR -71 191 8 416 265 140 76 chr10 131925474 131925802 -13663486 - L1ME4a LINE L1 -77 6044 5669 735 168 25 0 chr10 131925802 131925921 -13663367 - FLAM_A SINE Alu -11 122 1 416 265 140 76 chr10 131925921 131926137 -13663151 - L1ME4a LINE L1 -452 5669 5468 27 0 0 0 chr10 131926293 131926320 -13662968 + AT_rich Low_complexity Low_complexity 1 27 0 186 171 0 0 chr10 131926677 131926718 -13662570 + (TG)n Simple_repeat Simple_repeat 2 42 0 4117 196 55 72 chr10 131927071 131928129 -13661159 + MER45B DNA AcHobo 1 1040 0 2217 125 3 0 chr10 131928172 131928483 -13660805 - AluSx SINE Alu 0 312 1 253 313 94 0 chr10 131928605 131928733 -13660555 + MIR SINE MIR 47 186 -76 2017 127 145 16 chr10 131929302 131929681 -13659607 - MSTA LTR MaLR 0 428 1 2446 221 108 69 chr10 131929759 131930773 -13658515 + MER69B DNA AcHobo 103 1155 -71 301 105 18 53 chr10 131930791 131930848 -13658440 + AluS SINE Alu 20 74 -228 268 194 65 0 chr10 131930953 131931015 -13658273 + MER69B DNA AcHobo 1158 1223 -3 3917 163 39 12 chr10 131931099 131931385 -13657903 - L1MB7 LINE L1 -8 6176 5899 1645 78 0 14 chr10 131931385 131931602 -13657686 - AluY SINE Alu 0 311 98 3917 163 39 12 chr10 131931602 131932037 -13657251 - L1MB7 LINE L1 -285 5899 5436 622 149 28 105 chr10 131932467 131932577 -13656711 + MLT1C LTR MaLR 215 332 -135 522 98 0 0 chr10 131932577 131932659 -13656629 + (TG)n Simple_repeat Simple_repeat 1 82 0 1627 148 101 11 chr10 131932661 131932939 -13656349 - AluJb SINE Alu -9 303 1 622 149 28 105 chr10 131932939 131933007 -13656281 + MLT1C LTR MaLR 333 467 0 316 203 0 0 chr10 131933009 131933068 -13656220 + MLT1G LTR MaLR 216 274 -316 261 269 135 36 chr10 131933114 131933307 -13655981 + MLT1G LTR MaLR 307 518 -24 2359 102 36 30 chr10 131933613 131933975 -13655313 + THE1B LTR MaLR 1 364 0 270 0 0 0 chr10 131935718 131935748 -13653540 + (T)n Simple_repeat Simple_repeat 1 30 0 271 336 29 29 chr10 131936236 131936376 -13652912 - L3 LINE CR1 -48 1529 1390 25 31 0 0 chr10 131936731 131936763 -13652525 + AT_rich Low_complexity Low_complexity 1 32 0 2413 90 0 0 chr10 131936935 131937236 -13652052 + AluY SINE Alu 1 301 -10 9104 115 4 32 chr10 131937386 131938121 -13651167 + Tigger1 DNA MER2_type 1074 1755 -663 2226 93 25 0 chr10 131938121 131938401 -13650887 - AluSx SINE Alu -23 289 3 9104 115 4 32 chr10 131938401 131939046 -13650242 + Tigger1 DNA MER2_type 1755 2416 -2 1070 218 0 5 chr10 131939047 131939258 -13650030 + MER58B DNA MER1_type 124 333 -8 378 302 25 85 chr10 131941406 131941490 -13647798 - MIR SINE MIR -29 233 146 3069 128 4 16 chr10 131941490 131941874 -13647414 - L1MB2 LINE L1 -1 6170 5792 2377 135 8 27 chr10 131941874 131942245 -13647043 - THE1B LTR MaLR 0 364 1 3069 128 4 16 chr10 131942245 131942354 -13646934 - L1MB2 LINE L1 -379 5792 5683 378 302 25 85 chr10 131942354 131942504 -13646784 - MIR SINE MIR -116 146 13 1045 196 40 0 chr10 131943501 131943700 -13645588 - MER20 DNA MER1_type -3 216 10 727 215 18 25 chr10 131944894 131945096 -13644192 + MIR SINE MIR 11 206 -56 1340 109 0 26 chr10 131945167 131945360 -13643928 + AluSq SINE Alu 1 188 -125 232 249 12 87 chr10 131945931 131946104 -13643184 + HAL1 LINE L1 893 1052 -1455 314 253 93 43 chr10 131946168 131946330 -13642958 + L1M4 LINE L1 2208 2377 -3769 857 277 25 25 chr10 131946613 131946887 -13642401 + MLT1J LTR MaLR 236 509 -2 1512 225 114 20 chr10 131947021 131947051 -13642237 + L1M4 LINE L1 2160 2186 -3960 2258 122 0 0 chr10 131947051 131947354 -13641934 + AluSc SINE Alu 1 303 -6 1512 225 114 20 chr10 131947354 131947860 -13641428 + L1M4 LINE L1 2186 2746 -3400 394 228 110 75 chr10 131947918 131948019 -13641269 + L1M4 LINE L1 2633 2729 -3417 1690 185 157 15 chr10 131948019 131948490 -13640798 + MLT1F LTR MaLR 1 538 -4 394 228 110 75 chr10 131948490 131948885 -13640403 + L1M4 LINE L1 2729 3150 -2996 2227 115 3 0 chr10 131948885 131949180 -13640108 + AluSx SINE Alu 1 296 -16 394 228 110 75 chr10 131949180 131949191 -13640097 + L1M4 LINE L1 3150 3159 -2987 2466 74 3 3 chr10 131949265 131949564 -13639724 + AluSp SINE Alu 1 299 -14 24 0 0 0 chr10 131949675 131949699 -13639589 + AT_rich Low_complexity Low_complexity 1 24 0 806 260 26 0 chr10 131949772 131949964 -13639324 + MER3 DNA MER1_type 6 202 -7 6064 89 43 55 chr10 131950053 131951647 -13637641 + SVA Other Other 1 1130 -256 2088 148 29 58 chr10 131952428 131952880 -13636408 - L1MB7 LINE L1 0 6184 5746 324 311 65 44 chr10 131952936 131953119 -13636169 - L2 LINE L2 0 3313 3122 1299 190 106 54 chr10 131953119 131953545 -13635743 - LTR7 LTR ERV1 -2 448 1 324 311 65 44 chr10 131953545 131953609 -13635679 - L2 LINE L2 -191 3122 3061 3444 136 63 15 chr10 131953684 131954005 -13635283 + LTR24C LTR ERV1 1 305 -330 2983 115 32 0 chr10 131954005 131954448 -13634840 + L1PA16 LINE L1 5698 6154 -12 3444 136 63 15 chr10 131954448 131954731 -13634557 + LTR24C LTR ERV1 305 634 -1 447 92 0 0 chr10 131955807 131955872 -13633416 - L1PA15 LINE L1 -8 6157 6093 1391 161 5 0 chr10 131955872 131956096 -13633192 + L1PA15 LINE L1 5897 6121 -44 716 233 38 0 chr10 131956671 131956830 -13632458 - MER20 DNA MER1_type 0 219 55 2030 134 17 0 chr10 131959081 131959379 -13629909 - AluSq SINE Alu -10 303 1 1045 39 78 0 chr10 131960257 131960386 -13628902 + MER85 DNA T2_type 1 139 0 21 36 0 0 chr10 131962574 131962602 -13626686 + AT_rich Low_complexity Low_complexity 1 28 0 674 171 9 0 chr10 131962816 131962927 -13626361 - FLAM_C SINE Alu -30 113 2 239 284 80 11 chr10 131963173 131963261 -13626027 - L2 LINE L2 -670 2644 2551 269 196 0 0 chr10 131964190 131964236 -13625052 - FLAM_A SINE Alu -87 46 1 514 275 54 6 chr10 131964316 131964483 -13624805 - MER5B DNA MER1_type -3 175 1 1437 204 64 124 chr10 131964600 131965023 -13624265 - MLT1F1 LTR MaLR 0 567 181 1847 168 0 10 chr10 131965023 131965327 -13623961 - AluJb SINE Alu -11 301 1 1437 204 64 124 chr10 131965327 131965433 -13623855 - MLT1F1 LTR MaLR -386 181 70 1003 274 76 20 chr10 131965673 131966081 -13623207 + LTR16B LTR ERVL 34 464 0 663 250 11 5 chr10 131966283 131966471 -13622817 + LTR16B LTR ERVL 276 464 0 443 318 46 29 chr10 131966472 131966645 -13622643 - MLT1J2 LTR MaLR -150 300 125 665 190 113 7 chr10 131966671 131966813 -13622475 + Tigger1 DNA MER2_type 1 157 -2261 472 120 0 0 chr10 131966806 131966881 -13622407 + Tigger1 DNA MER2_type 2206 2280 -138 * 6368 90 2 0 chr10 131967355 131968514 -13620774 - L1PA8A LINE L1 0 6131 4980 909 133 7 7 chr10 131968756 131968891 -13620397 + AluJo SINE Alu 1 135 -177 790 97 18 0 chr10 131969082 131969195 -13620093 + L1PB3 LINE L1 6036 6150 -4 25 51 0 0 chr10 131969209 131969248 -13620040 + AT_rich Low_complexity Low_complexity 1 39 0 5215 154 53 34 chr10 131969754 131969877 -13619411 - L1MC3 LINE L1 -71 7714 7595 465 165 0 0 chr10 131969877 131969956 -13619332 - MADE1 DNA Mariner 0 80 2 5215 154 53 34 chr10 131969956 131970874 -13618414 - L1MC3 LINE L1 -190 7595 6653 * 11481 154 11 20 chr10 131970873 131974146 -13615142 - L1P3 LINE L1 -3157 3304 1 2568 62 0 0 chr10 131974235 131974544 -13614744 + AluY SINE Alu 1 309 -2 198 0 0 0 chr10 131974627 131974649 -13614639 + (T)n Simple_repeat Simple_repeat 1 22 0 180 284 129 60 chr10 131976427 131976543 -13612745 - L2 LINE L2 -39 3233 3110 365 311 92 0 chr10 131976606 131976725 -13612563 - MIR SINE MIR -105 157 28 368 313 53 45 chr10 131977276 131977602 -13611686 - MLT1K LTR MaLR -15 573 210 313 239 0 0 chr10 131979270 131979341 -13609947 - L2 LINE L2 -2 3311 3241 1704 198 7 3 chr10 131980361 131980659 -13608629 + AluJo SINE Alu 1 299 -13 404 302 72 7 chr10 131980777 131980916 -13608372 + MIR SINE MIR 46 193 -69 222 328 48 86 chr10 131981671 131981939 -13607349 + L2 LINE L2 2824 3081 -191 326 234 250 16 chr10 131981959 131982087 -13607201 + MIR SINE MIR 24 181 -81 517 266 63 0 chr10 131982252 131982402 -13606886 + MIR SINE MIR 40 201 -61 1066 174 16 16 chr10 131982402 131982586 -13606702 - MER58A DNA MER1_type -2 222 39 266 213 27 40 chr10 131982603 131982678 -13606610 + MIR SINE MIR 189 262 0 1663 204 46 85 chr10 131982788 131983292 -13605996 + MLT1D LTR MaLR 22 505 0 481 296 92 63 chr10 131984261 131984344 -13604944 + MLT1J1 LTR MaLR 52 131 -315 2579 116 41 32 chr10 131984344 131984785 -13604503 - MER65A LTR ERV1 0 445 1 481 296 92 63 chr10 131984785 131985083 -13604205 + MLT1J1 LTR MaLR 131 444 -2 28 0 0 0 chr10 131986111 131986139 -13603149 + AT_rich Low_complexity Low_complexity 1 28 0 246 143 32 16 chr10 131986189 131986252 -13603036 + (TA)n Simple_repeat Simple_repeat 1 64 0 646 233 33 92 chr10 131986482 131986722 -13602566 - MER102a DNA MER1_type -9 321 96 211 130 29 58 chr10 131986739 131986808 -13602480 + A-rich Low_complexity Low_complexity 3 69 0 760 265 96 21 chr10 131987462 131987753 -13601535 - LTR16C LTR ERVL 0 491 179 2516 61 0 6 chr10 131988065 131988377 -13600911 - AluY SINE Alu -1 310 1 207 69 0 0 chr10 131988641 131988670 -13600618 + (T)n Simple_repeat Simple_repeat 1 29 0 192 279 127 13 chr10 131989267 131989346 -13599942 - L2 LINE L2 -6 3266 3179 1242 137 123 0 chr10 131989369 131989580 -13599708 + AluSg/x SINE Alu 75 311 -1 390 246 39 84 chr10 131990107 131990286 -13599002 + MER5B DNA MER1_type 3 173 -5 589 251 92 36 chr10 131990482 131990677 -13598611 - L1ME3A LINE L1 -8 6162 5957 719 182 8 0 chr10 131990727 131990848 -13598440 + FLAM_A SINE Alu 1 122 -11 225 0 0 0 chr10 131990860 131990885 -13598403 + (TG)n Simple_repeat Simple_repeat 2 26 0 332 189 100 11 chr10 131990886 131990976 -13598312 + L1MC4 LINE L1 6608 6705 -1337 456 271 30 88 chr10 131991120 131991382 -13597906 + MIR SINE MIR 13 259 -3 3487 172 36 41 chr10 131991529 131992129 -13597159 - L1MB3 LINE L1 -12 6171 5569 252 0 0 0 chr10 131992129 131992157 -13597131 + (TTAA)n Simple_repeat Simple_repeat 1 28 0 2073 128 7 0 chr10 131992161 131992443 -13596845 - AluSq SINE Alu -29 284 1 3487 172 36 41 chr10 131992443 131992563 -13596725 - L1MB3 LINE L1 -617 5566 5450 2037 139 0 16 chr10 131992919 131993235 -13596053 - AluSx SINE Alu -1 311 1 1806 178 30 24 chr10 131993520 131993857 -13595431 + LTR32 LTR ERVL 14 352 -119 759 181 14 7 chr10 131993874 131994018 -13595270 + LTR32 LTR ERVL 327 471 0 10497 77 3 6 chr10 131994159 131996329 -13592959 - L1PA7 LINE L1 -3 6151 3983 2034 154 0 3 chr10 131996433 131996756 -13592532 + AluSx SINE Alu 2 323 0 277 280 164 42 chr10 131997165 131997379 -13591909 - MIR SINE MIR -1 261 22 5712 152 75 3 chr10 131997841 131998936 -13590352 - L1MC2 LINE L1 -5 6339 5170 368 317 50 6 chr10 131999120 131999281 -13590007 - L2 LINE L2 -4 3268 3101 359 284 45 34 chr10 131999570 131999746 -13589542 + MER5B DNA MER1_type 1 178 0 1511 154 141 23 chr10 131999845 132000144 -13589144 - LTR47A LTR ERVL -8 444 111 201 209 70 9 chr10 132000439 132000554 -13588734 + (TA)n Simple_repeat Simple_repeat 2 123 0 * 334 197 16 60 chr10 132000497 132000680 -13588608 + (TTATA)n Simple_repeat Simple_repeat 5 179 0 191 316 18 0 chr10 132001137 132001194 -13588094 + MER5B DNA MER1_type 1 58 -120 238 297 153 9 chr10 132001368 132001479 -13587809 - MIR3 SINE MIR -53 155 29 886 30 0 0 chr10 132002839 132002938 -13586350 + L1PA8 LINE L1 6069 6167 -5 897 316 92 16 chr10 132002938 132003428 -13585860 - L1ME4a LINE L1 -29 6092 5566 377 264 31 47 chr10 132003543 132003672 -13585616 + L2 LINE L2 3187 3313 0 393 303 52 28 chr10 132003683 132003894 -13585394 - L1ME4a LINE L1 -813 5333 5118 243 252 65 50 chr10 132003954 132004093 -13585195 - L1P LINE L1 -1092 5054 4914 207 250 281 21 chr10 132004244 132004340 -13584948 - MIR SINE MIR -72 136 16 13754 104 6 9 chr10 132005199 132006342 -13582946 + L1P LINE L1 1690 2823 -3323 1967 119 0 4 chr10 132006342 132006611 -13582677 + AluSg SINE Alu 40 307 -3 13754 104 6 9 chr10 132006611 132007482 -13581806 + L1P LINE L1 2823 3696 -2450 1868 84 0 0 chr10 132008381 132008620 -13580668 - L1P3 LINE L1 -6215 246 8 3452 195 25 14 chr10 132009133 132009778 -13579510 + MER82 DNA MER2_type 1 652 -1 298 269 37 60 chr10 132009841 132009975 -13579313 + MIR SINE MIR 17 147 -61 23 0 0 0 chr10 132010930 132010953 -13578335 + AT_rich Low_complexity Low_complexity 1 23 0 387 89 0 0 chr10 132012371 132012427 -13576861 + (TG)n Simple_repeat Simple_repeat 2 57 0 366 315 133 18 chr10 132013296 132013461 -13575827 + MIR SINE MIR 2 185 -77 202 345 0 0 chr10 132013703 132013758 -13575530 + L2 LINE L2 3229 3283 -30 180 271 86 14 chr10 132013785 132013855 -13575433 + L2 LINE L2 2630 2704 -610 518 271 69 32 chr10 132014262 132014450 -13574838 - LTR33 LTR ERVL -320 201 7 318 269 0 0 chr10 132015420 132015498 -13573790 - L1MC4 LINE L1 -1339 6703 6626 180 217 0 0 chr10 132016110 132016156 -13573132 + A-rich Low_complexity Low_complexity 1 46 0 322 260 160 52 chr10 132016375 132016644 -13572644 - L1M4 LINE L1 -748 5398 5101 2717 168 10 12 chr10 132017935 132018434 -13570854 - L1MC3 LINE L1 0 7785 7288 302 220 119 42 chr10 132018434 132018552 -13570736 - MIR3 SINE MIR -67 141 15 303 270 0 22 chr10 132018902 132018991 -13570297 + MER113 DNA MER1_type? 1 87 -434 571 343 23 3 chr10 132019459 132019759 -13569529 + LTR16C LTR ERVL 66 371 -120 314 365 127 0 chr10 132019798 132019924 -13569364 + L2 LINE L2 3126 3267 -5 257 216 45 45 chr10 132020044 132020155 -13569133 - LTR67 LTR ERVL -13 544 434 400 262 68 24 chr10 132020191 132020382 -13568906 - MIR SINE MIR 0 262 14 549 248 8 0 chr10 132020693 132020810 -13568478 + MER5A DNA MER1_type 4 121 -68 871 231 109 61 chr10 132021090 132021466 -13567822 - MLT1K LTR MaLR -7 581 188 1362 223 18 71 chr10 132021551 132022004 -13567284 + MER63B DNA MER1_type 5 433 -3 363 263 0 84 chr10 132022640 132022830 -13566458 + G-rich Low_complexity Low_complexity 1 174 0 228 219 0 0 chr10 132023952 132023993 -13565295 - L1M4b LINE L1 -6326 533 493 189 304 36 0 chr10 132024049 132024105 -13565183 - MIR SINE MIR -119 143 86 402 165 89 0 chr10 132024381 132024460 -13564828 - L1M4b LINE L1 -5676 1183 1098 601 72 48 0 chr10 132024461 132024544 -13564744 + Alu SINE Alu 224 310 0 4620 170 158 20 chr10 132024547 132025522 -13563766 - L1M4b LINE L1 -5748 1111 3 12412 132 12 11 chr10 132025528 132026950 -13562338 - Tigger1 DNA MER2_type 0 2418 991 3096 64 11 8 chr10 132026950 132027324 -13561964 - THE1C LTR MaLR 0 375 1 12412 132 12 11 chr10 132027324 132027843 -13561445 - Tigger1 DNA MER2_type -1427 991 474 5780 191 132 21 chr10 132027843 132029415 -13559873 - L1MA4A LINE L1 -8 7357 5961 2077 94 4 0 chr10 132029415 132029681 -13559607 - L1PA7 LINE L1 -14 6140 5874 5780 191 132 21 chr10 132029681 132029702 -13559586 - L1MA4A LINE L1 -1404 5961 5944 2340 103 0 6 chr10 132029702 132030014 -13559274 + AluSg SINE Alu 1 310 0 5780 191 132 21 chr10 132030014 132030867 -13558421 - L1MA4A LINE L1 -1421 5944 4482 4156 246 141 28 chr10 132030864 132032523 -13556765 - L1MA4A LINE L1 -5474 1735 1 * 1393 105 0 0 chr10 132032574 132032765 -13556523 - Tigger1 DNA MER2_type -1927 491 301 1756 180 0 13 chr10 132032777 132033083 -13556205 - AluJb SINE Alu -10 302 1 13416 184 22 38 chr10 132033232 132034942 -13554346 - L1PA16 LINE L1 -9 6860 5125 1675 193 6 13 chr10 132034942 132035253 -13554035 - AluSx SINE Alu -3 309 1 13416 184 22 38 chr10 132035253 132036555 -13552733 - L1PA16 LINE L1 -1744 5125 3805 2783 123 3 0 chr10 132036555 132036929 -13552359 + THE1C LTR MaLR 1 375 0 13416 184 22 38 chr10 132036929 132040717 -13548571 - L1PA16 LINE L1 -3064 3805 71 1551 167 46 21 chr10 132040717 132040998 -13548290 - Tigger1 DNA MER2_type -2130 288 1 424 297 55 8 chr10 132041001 132041129 -13548159 - MIR SINE MIR -105 157 24 2291 144 9 0 chr10 132041847 132042188 -13547100 - MER2 DNA MER2_type 0 344 1 661 304 219 14 chr10 132042191 132042744 -13546544 + L2 LINE L2 2291 2956 -358 2044 220 58 61 chr10 132042745 132043138 -13546150 + MLT1E2 LTR MaLR 16 408 -218 1676 152 0 4 chr10 132043138 132043394 -13545894 - AluJb SINE Alu -56 256 2 2044 220 58 61 chr10 132043394 132043605 -13545683 + MLT1E2 LTR MaLR 408 618 -8 909 224 58 5 chr10 132043825 132044048 -13545240 + MIR SINE MIR 25 259 -3 1065 227 39 0 chr10 132044081 132044288 -13545000 + MER58A DNA MER1_type 3 217 -7 210 326 35 35 chr10 132044296 132044382 -13544906 + L2 LINE L2 3200 3285 -28 439 235 81 0 chr10 132045795 132045931 -13543357 + MIR SINE MIR 116 262 0 340 279 108 19 chr10 132046188 132046446 -13542842 - L1MC/D LINE L1 -2273 5535 5255 1473 136 86 31 chr10 132046724 132046981 -13542307 - MSTC LTR MaLR -8 420 150 757 299 125 35 chr10 132047024 132047886 -13541402 - L1MC/D LINE L1 -1484 4662 3723 244 62 0 0 chr10 132047918 132047950 -13541338 - MLT1D LTR MaLR 0 505 474 226 163 41 41 chr10 132047947 132047996 -13541292 - MLT1C LTR MaLR -372 95 47 * 1501 199 54 62 chr10 132048432 132048820 -13540468 + MST-int LTR MaLR 692 1076 -575 368 133 0 80 chr10 132048820 132048895 -13540393 + MSTB LTR MaLR 358 426 0 222 303 114 8 chr10 132049812 132049944 -13539344 + L2 LINE L2 2633 2778 -536 208 208 0 19 chr10 132049986 132050039 -13539249 + MIR SINE MIR 4 55 -207 * 235 200 0 0 chr10 132050032 132050077 -13539211 + MIR SINE MIR 189 233 -29 203 279 25 13 chr10 132050185 132050264 -13539024 - MIR SINE MIR -49 213 134 223 324 57 29 chr10 132050265 132050370 -13538918 + MER5A DNA MER1_type 18 125 -64 * 519 261 52 33 chr10 132050284 132050437 -13538851 - MER5B DNA MER1_type -22 156 1 311 293 145 80 chr10 132050544 132050882 -13538406 + L2 LINE L2 2910 3269 -3 1435 195 3 36 chr10 132051594 132051896 -13537392 - AluJo SINE Alu -20 292 1 2132 129 0 7 chr10 132053110 132053412 -13535876 - AluSx SINE Alu -12 300 1 23 0 0 0 chr10 132053623 132053646 -13535642 + AT_rich Low_complexity Low_complexity 1 23 0 3496 116 181 64 chr10 132053936 132054817 -13534471 - pTR5 LTR ERV1 0 2606 1524 23 0 0 0 chr10 132055206 132055229 -13534059 + AT_rich Low_complexity Low_complexity 1 23 0 1788 135 34 0 chr10 132055231 132055527 -13533761 - L1MA4A LINE L1 -12 6291 5986 518 206 119 45 chr10 132055605 132055915 -13533373 - HAL1b LINE L1 0 1348 1016 224 173 115 0 chr10 132056122 132056174 -13533114 - L2 LINE L2 -14 3299 3242 373 335 136 18 chr10 132056264 132056661 -13532627 + L2 LINE L2 2829 3272 -41 195 243 0 0 chr10 132057696 132057733 -13531555 + MIR SINE MIR 40 76 -132 428 266 32 16 chr10 132057746 132057870 -13531418 - MER5A DNA MER1_type -34 155 30 2339 119 0 0 chr10 132058184 132058487 -13530801 + AluSx SINE Alu 1 303 -9 456 245 0 7 chr10 132058667 132058806 -13530482 + L1MDa LINE L1 972 1109 -5010 370 285 59 37 chr10 132058795 132059161 -13530127 + L1MDa LINE L1 1315 1620 -870 * 2351 82 0 0 chr10 132059176 132059470 -13529818 + AluSg1 SINE Alu 1 294 -15 1350 95 95 0 chr10 132059611 132059822 -13529466 - L1PA8 LINE L1 -6 6166 5936 3674 157 27 7 chr10 132059833 132061119 -13528169 - L1PA8 LINE L1 -344 5828 4522 9637 159 14 12 chr10 132061119 132062834 -13526454 - Tigger1 DNA MER2_type -699 1719 1 308 328 86 16 chr10 132064299 132064427 -13524861 + L2 LINE L2 3136 3272 0 244 329 0 0 chr10 132064876 132064949 -13524339 - L1MC4 LINE L1 -202 7840 7768 1094 292 121 22 chr10 132065094 132065868 -13523420 - L1MC4a LINE L1 -1340 6468 5618 43 35 0 0 chr10 132066498 132066555 -13522733 + AT_rich Low_complexity Low_complexity 1 57 0 375 284 155 33 chr10 132067819 132068220 -13521068 - L1ME3 LINE L1 -303 5859 5414 6406 242 61 49 chr10 132068257 132071672 -13517616 + L1MEc LINE L1 1479 4862 -1353 40721 37 25 2 chr10 132071802 132077666 -13511622 - L1PA3 LINE L1 -148 6007 7 516 306 54 11 chr10 132077721 132077907 -13511381 + MIR3 SINE MIR 15 208 0 209 354 0 0 chr10 132078920 132078985 -13510303 - L2 LINE L2 -954 2360 2296 335 266 11 21 chr10 132079076 132079170 -13510118 - MIR SINE MIR -111 151 59 458 225 197 22 chr10 132079274 132079589 -13509699 - L1MC5 LINE L1 -140 7821 7452 267 162 15 15 chr10 132080583 132080651 -13508637 + MER116 DNA Mariner 1 68 -12 2405 227 119 30 chr10 132080802 132081542 -13507746 - MER21B LTR ERV1 -44 819 14 326 160 25 118 chr10 132081537 132081656 -13507632 - MER21B LTR ERV1 -755 108 1 * 224 152 109 0 chr10 132081828 132081874 -13507414 + MIR SINE MIR 119 169 -93 2497 146 31 12 chr10 132081913 132082320 -13506968 + MSTB LTR MaLR 1 418 -8 248 91 23 0 chr10 132082320 132082364 -13506924 + (CAAA)n Simple_repeat Simple_repeat 2 46 0 3526 185 46 9 chr10 132082374 132083164 -13506124 + MSTB-int LTR MaLR 1 819 -832 229 267 67 56 chr10 132083476 132083566 -13505722 + MIR3 SINE MIR 116 206 -2 892 148 55 22 chr10 132083610 132083793 -13505495 + MER53 DNA DNA 1 189 0 3829 24 0 0 chr10 132084379 132084851 -13504437 + L1PA3 LINE L1 5705 6176 0 627 63 21 74 chr10 132084909 132085004 -13504284 - AluSg/x SINE Alu -29 280 191 202 317 54 36 chr10 132085487 132085654 -13503634 + L2 LINE L2 2335 2504 -810 488 288 142 9 chr10 132086444 132086670 -13502618 + LTR16C LTR ERVL 90 345 -146 814 182 79 88 chr10 132086673 132087001 -13502287 - MSTD LTR MaLR 0 396 1 333 262 119 8 chr10 132087001 132087127 -13502161 + LTR16C LTR ERVL 344 483 -8 1796 157 0 0 chr10 132087170 132087432 -13501856 + AluSx SINE Alu 38 299 -13 180 0 0 0 chr10 132087432 132087452 -13501836 + (GA)n Simple_repeat Simple_repeat 2 21 0 409 258 70 8 chr10 132087569 132087697 -13501591 + L2 LINE L2 3127 3262 -10 347 194 61 31 chr10 132088584 132088682 -13500606 + MIR SINE MIR 118 218 -44 212 211 158 40 chr10 132088683 132088759 -13500529 + MIR SINE MIR 168 252 -10 1165 240 47 99 chr10 132088905 132089518 -13499770 + L1ME3A LINE L1 5585 6165 -5 2174 140 42 35 chr10 132090022 132090428 -13498860 + Tigger2a DNA MER2_type 26 434 0 218 355 21 11 chr10 132090731 132090824 -13498464 + L2 LINE L2 2693 2786 -528 505 281 91 16 chr10 132091095 132091337 -13497951 - L3 LINE CR1 -332 1245 986 1308 189 140 66 chr10 132091348 132091804 -13497484 + MLT1D LTR MaLR 14 503 -2 371 220 184 0 chr10 132091994 132092103 -13497185 + MIR3 SINE MIR 73 201 -7 278 358 65 50 chr10 132092168 132092369 -13496919 + L2 LINE L2 3019 3222 -50 2253 108 0 0 chr10 132092729 132093024 -13496264 - AluSg SINE Alu -15 295 1 2986 180 34 52 chr10 132093520 132094283 -13495005 + LTR1B LTR ERV1 1 749 -77 185 349 208 19 chr10 132095355 132095936 -13493352 - L2 LINE L2 -340 2974 2284 * 451 283 166 21 chr10 132095932 132096119 -13493169 - MIR SINE MIR -3 259 46 1228 179 218 107 chr10 132096517 132097200 -13492088 - LTR41 LTR ERVL -7 766 8 24 0 0 0 chr10 132097953 132097977 -13491311 + AT_rich Low_complexity Low_complexity 1 24 0 259 226 12 24 chr10 132099016 132099100 -13490188 + HAL1 LINE L1 970 1052 -1455 347 280 96 38 chr10 132099164 132099403 -13489885 + L1M4 LINE L1 2208 2460 -3686 756 286 26 22 chr10 132099610 132099883 -13489405 + MLT1J LTR MaLR 236 509 -2 1318 222 117 24 chr10 132100017 132100047 -13489241 + L1M4 LINE L1 2160 2186 -3960 2260 122 0 0 chr10 132100047 132100350 -13488938 + AluSc SINE Alu 1 303 -6 1318 222 117 24 chr10 132100350 132100856 -13488432 + L1M4 LINE L1 2186 2746 -3400 248 238 104 69 chr10 132100914 132101015 -13488273 + L1M4 LINE L1 2633 2729 -3417 1641 187 157 15 chr10 132101015 132101486 -13487802 + MLT1F LTR MaLR 1 538 -4 248 238 104 69 chr10 132101486 132101881 -13487407 + L1M4 LINE L1 2729 3150 -2996 2174 115 3 3 chr10 132101881 132102177 -13487111 + AluSx SINE Alu 1 296 -16 248 238 104 69 chr10 132102177 132102188 -13487100 + L1M4 LINE L1 3150 3159 -2987 2442 74 3 3 chr10 132102262 132102561 -13486727 + AluSp SINE Alu 1 299 -14 24 0 0 0 chr10 132102672 132102696 -13486592 + AT_rich Low_complexity Low_complexity 1 24 0 547 262 77 56 chr10 132102962 132103393 -13485895 - L1M4 LINE L1 -1984 4162 3723 244 62 0 0 chr10 132103425 132103457 -13485831 - MLT1D LTR MaLR 0 505 474 * 286 230 58 23 chr10 132103454 132103541 -13485747 - MLT1C LTR MaLR -372 95 6 817 254 95 37 chr10 132103561 132103856 -13485432 + MLT1I LTR MaLR 36 347 -62 1989 182 37 37 chr10 132103858 132104252 -13485036 - Cheshire DNA MER1_type -1 2419 2023 1429 183 122 4 chr10 132104252 132104514 -13484774 - AluSx SINE Alu -19 293 1 1989 182 37 37 chr10 132104514 132104554 -13484734 - Cheshire DNA MER1_type -396 2024 1985 424 241 120 0 chr10 132104799 132104907 -13484381 + MIR SINE MIR 8 128 -134 700 110 37 0 chr10 132104942 132105051 -13484237 - Cheshire DNA MER1_type -761 1659 1547 241 132 0 0 chr10 132105137 132105175 -13484113 + MLT1I LTR MaLR 348 385 -24 234 0 0 0 chr10 132105187 132105213 -13484075 + (TG)n Simple_repeat Simple_repeat 1 26 0 7324 51 9 11 chr10 132105441 132107042 -13482246 - SVA Other Other -723 1366 1 669 267 30 0 chr10 132107130 132107295 -13481993 - MER3 DNA MER1_type -7 202 33 1879 164 133 16 chr10 132107553 132107936 -13481352 - MSTA LTR MaLR 0 428 1 33 0 0 0 chr10 132108857 132108890 -13480398 + AT_rich Low_complexity Low_complexity 1 33 0 739 35 0 0 chr10 132108890 132108976 -13480312 - L1PA3 LINE L1 -3 6152 6067 1864 180 10 48 chr10 132109860 132110157 -13479131 - L1MA4 LINE L1 -212 6088 5810 1733 52 69 76 chr10 132110157 132110447 -13478841 + AluY SINE Alu 1 288 -23 1864 180 10 48 chr10 132110447 132110561 -13478727 - L1MA4 LINE L1 -490 5810 5693 940 37 0 0 chr10 132112239 132112346 -13476942 + L1PA5 LINE L1 6048 6154 0 188 284 172 52 chr10 132112369 132112503 -13476785 + L2 LINE L2 2912 3061 -211 197 193 0 18 chr10 132113599 132113656 -13475632 + GA-rich Low_complexity Low_complexity 5 60 0 267 378 79 12 chr10 132114869 132115033 -13474255 - MIR SINE MIR -86 176 2 588 219 9 9 chr10 132116011 132116125 -13473163 - MER7A DNA MER2_type -234 112 1 5331 166 13 25 chr10 132116125 132117211 -13472077 - L1MA8 LINE L1 -33 6258 5185 220 204 0 0 chr10 132117576 132117620 -13471668 - MIR SINE MIR -75 187 144 290 247 48 96 chr10 132117965 132118131 -13471157 - MLT1L LTR MaLR -6 609 452 2446 68 7 0 chr10 132119716 132120011 -13469277 - AluSq SINE Alu -16 297 1 4484 76 36 0 chr10 132120379 132120955 -13468333 - L1PA10 LINE L1 -2 6166 5570 713 320 58 9 chr10 132120993 132121337 -13467951 + L2 LINE L2 2602 2962 -352 1548 93 5 0 chr10 132122213 132122407 -13466881 + AluSq SINE Alu 2 196 -117 2933 211 67 47 chr10 132122550 132123296 -13465992 + L1ME1 LINE L1 5121 5897 -269 1702 182 39 33 chr10 132123296 132123659 -13465629 - MLT1A1 LTR MaLR 0 365 1 2933 211 67 47 chr10 132123659 132123932 -13465356 + L1ME1 LINE L1 5897 6163 -3 353 251 98 106 chr10 132123978 132124213 -13465075 + MIR SINE MIR 13 245 -17 683 210 42 0 chr10 132125439 132125582 -13463706 - MIR SINE MIR -50 212 64 240 214 0 0 chr10 132125769 132125825 -13463463 + (TG)n Simple_repeat Simple_repeat 1 56 0 251 167 0 37 chr10 132125832 132125886 -13463402 + MER4-int LTR ERV1 1111 1162 -5436 204 244 0 0 chr10 132125889 132125930 -13463358 + (TATG)n Simple_repeat Simple_repeat 4 44 0 251 167 0 37 chr10 132125930 132125984 -13463304 + MER4-int LTR ERV1 1111 1162 -5436 225 310 0 0 chr10 132125985 132126043 -13463245 + (TG)n Simple_repeat Simple_repeat 1 58 0 239 233 0 33 chr10 132127868 132127928 -13461360 - L2 LINE L2 0 3272 3215 2484 213 40 40 chr10 132128013 132128567 -13460721 + MLT2B3 LTR ERVL 1 554 0 547 171 11 0 chr10 132128586 132128674 -13460614 - AluSp/q SINE Alu -14 299 211 3742 107 56 5 chr10 132128826 132129379 -13459909 + MER11C LTR ERVK 477 1057 -14 5199 203 24 11 chr10 132129418 132130526 -13458762 - L1P LINE L1 -879 5267 4146 267 146 146 0 chr10 132130526 132130581 -13458707 + MLT1A2 LTR MaLR 308 370 -4 1503 157 30 17 chr10 132130703 132131002 -13458286 - L1MA5A LINE L1 -4 6293 5991 243 0 0 0 chr10 132131414 132131441 -13457847 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 657 304 87 43 chr10 132132280 132133031 -13456257 - L2 LINE L2 0 3313 2520 1540 236 76 14 chr10 132133034 132133466 -13455822 + MLT1C LTR MaLR 1 459 -8 214 200 18 55 chr10 132134038 132134093 -13455195 + L2 LINE L2 3180 3232 -81 34 55 0 0 chr10 132134223 132134278 -13455010 + AT_rich Low_complexity Low_complexity 1 55 0 50 31 0 0 chr10 132134508 132134572 -13454716 + AT_rich Low_complexity Low_complexity 1 64 0 184 138 0 69 chr10 132134633 132134691 -13454597 + (GGAA)n Simple_repeat Simple_repeat 1 54 0 252 300 126 32 chr10 132135006 132135196 -13454092 + L2 LINE L2 3106 3313 0 424 325 80 0 chr10 132135200 132135351 -13453937 + MIR SINE MIR 95 257 -5 2211 97 0 7 chr10 132135397 132135685 -13453603 - THE1B LTR MaLR -1 363 78 1083 234 18 9 chr10 132136559 132136781 -13452507 - MER58A DNA MER1_type 0 224 1 22 0 0 0 chr10 132137596 132137618 -13451670 + AT_rich Low_complexity Low_complexity 1 22 0 271 320 176 13 chr10 132138379 132138490 -13450798 + MIR3 SINE MIR 31 175 -33 1081 241 18 0 chr10 132138490 132138710 -13450578 + MER58A DNA MER1_type 1 224 0 271 320 176 13 chr10 132138710 132138751 -13450537 + MIR3 SINE MIR 175 208 0 235 318 39 0 chr10 132139794 132139923 -13449365 - MLT1K LTR MaLR -329 259 126 1930 154 8 59 chr10 132141319 132141677 -13447611 + MER2 DNA MER2_type 2 341 -3 2434 283 31 6 chr10 132141957 132142658 -13446630 + L1MEc LINE L1 35 753 -5643 826 176 0 8 chr10 132142658 132142783 -13446505 + FLAM_A SINE Alu 1 124 -9 3766 240 42 29 chr10 132142785 132144660 -13444628 + L1MEc LINE L1 1047 2927 -3288 655 301 0 12 chr10 132144778 132144951 -13444337 - MIR SINE MIR -73 189 19 268 296 176 11 chr10 132145674 132145850 -13443438 + L2 LINE L2 2690 2894 -420 202 300 185 23 chr10 132146048 132146178 -13443110 + L2 LINE L2 3122 3272 0 237 256 44 44 chr10 132147393 132147483 -13441805 - MIR SINE MIR -56 206 117 246 336 80 0 chr10 132147490 132147603 -13441685 + MLT1K LTR MaLR 3 124 -464 3417 121 36 63 chr10 132147915 132148533 -13440755 - MER4D LTR ERV1 0 872 272 920 157 25 19 chr10 132148536 132148695 -13440593 - MER4D LTR ERV1 -712 160 1 2908 76 2 78 chr10 132148812 132149220 -13440068 - MER51B LTR ERV1 0 377 1 1207 182 18 36 chr10 132149303 132149523 -13439765 + MER20 DNA MER1_type 1 216 -3 480 185 28 28 chr10 132150862 132150970 -13438318 + MIR SINE MIR 73 180 -82 236 277 11 64 chr10 132151068 132151114 -13438174 - MIR SINE MIR -19 243 203 2883 139 12 2 chr10 132151114 132151538 -13437750 + MSTA LTR MaLR 1 428 0 236 277 11 64 chr10 132151538 132151585 -13437703 - MIR SINE MIR -59 203 155 201 324 0 40 chr10 132151581 132151655 -13437633 + L2 LINE L2 3202 3272 0 * 385 311 85 6 chr10 132152002 132152166 -13437122 + MIR SINE MIR 81 257 -5 859 271 33 0 chr10 132152323 132152537 -13436751 + MIR SINE MIR 21 241 -21 453 238 61 37 chr10 132153643 132153807 -13435481 - Ricksha DNA DNA -839 415 248 * 916 214 143 89 chr10 132153708 132153951 -13435337 - ERVL LTR ERVL -7 5757 5480 1560 187 13 27 chr10 132153951 132154066 -13435222 + AluJb SINE Alu 3 118 -194 228 35 0 0 chr10 132154066 132154095 -13435193 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 1560 187 13 27 chr10 132154095 132154278 -13435010 + AluJb SINE Alu 118 297 -15 916 214 143 89 chr10 132154278 132154460 -13434828 - ERVL LTR ERVL -284 5480 5309 467 235 0 0 chr10 132154456 132154541 -13434747 - ERVL LTR ERVL -2304 3460 3376 * 1061 269 73 64 chr10 132154669 132155231 -13434057 - MLT2F LTR ERVL -91 572 6 610 296 40 24 chr10 132155360 132155613 -13433675 - MIR SINE MIR -1 261 5 2849 136 36 0 chr10 132156229 132156640 -13432648 + MSTA LTR MaLR 3 428 0 488 220 28 104 chr10 132156709 132156891 -13432397 + MIR3 SINE MIR 35 202 -6 305 254 152 0 chr10 132157499 132157658 -13431630 - MIR SINE MIR -52 210 18 196 310 0 17 chr10 132157815 132157873 -13431415 - L2 LINE L2 -16 3256 3200 228 67 0 0 chr10 132158500 132158530 -13430758 + (TAAAA)n Simple_repeat Simple_repeat 4 33 0 2373 74 0 7 chr10 132159235 132159533 -13429755 + AluY SINE Alu 1 296 -15 2277 95 20 0 chr10 132160072 132160366 -13428922 - AluSx SINE Alu -12 300 1 720 206 88 0 chr10 132160711 132160871 -13428417 + MER5A DNA MER1_type 16 189 0 194 284 27 54 chr10 132160889 132160963 -13428325 + L3 LINE CR1 1495 1566 -11 1604 209 54 76 chr10 132162348 132162864 -13426424 + MLT1D LTR MaLR 1 505 0 200 204 61 0 chr10 132163993 132164042 -13425246 + GA-rich Low_complexity Low_complexity 5 56 0 301 244 171 8 chr10 132165905 132166028 -13423260 + MIR SINE MIR 109 251 -11 1159 191 39 76 chr10 132166231 132166561 -13422727 + MLT1A2 LTR MaLR 1 318 -56 5305 138 16 7 chr10 132166598 132167441 -13421847 - L1PA15 LINE L1 -9 6156 5303 1980 52 39 0 chr10 132167441 132167674 -13421614 + L1PA7 LINE L1 5895 6136 -18 5305 138 16 7 chr10 132167674 132167703 -13421585 - L1PA15 LINE L1 -862 5303 5276 21 0 0 0 chr10 132168776 132168797 -13420491 + AT_rich Low_complexity Low_complexity 1 21 0 527 245 35 14 chr10 132169261 132169404 -13419884 - MIR SINE MIR -115 147 2 710 178 0 8 chr10 132170058 132170187 -13419101 + LTR5 LTR ERVK 3 130 -839 592 238 138 44 chr10 132170211 132170392 -13418896 - MER63A DNA MER1_type -7 203 6 1968 186 70 52 chr10 132171829 132172313 -13416975 + MLT1D LTR MaLR 13 505 0 21 36 0 0 chr10 132173039 132173067 -13416221 + AT_rich Low_complexity Low_complexity 1 28 0 348 371 140 0 chr10 132173731 132174087 -13415201 - L1MC4a LINE L1 -1882 5926 5521 925 264 56 4 chr10 132174108 132174358 -13414930 - MER68 LTR ERV1 0 562 300 2142 123 16 0 chr10 132174358 132174726 -13414562 - AluSq SINE Alu 0 373 1 536 239 60 123 chr10 132174730 132175064 -13414224 - MER68 LTR ERV1 -248 314 2 287 212 21 28 chr10 132175072 132175166 -13414122 - L1MC4a LINE L1 -672 5494 5399 231 249 55 55 chr10 132175183 132175348 -13413940 - L1MC4a LINE L1 -786 5360 5196 1358 274 37 26 chr10 132175422 132175879 -13413409 - MLT1C LTR MaLR 0 467 6 339 294 8 0 chr10 132175884 132176003 -13413285 - L1MC4a LINE L1 -2241 3905 3786 222 37 0 0 chr10 132176053 132176080 -13413208 + (TG)n Simple_repeat Simple_repeat 1 27 0 2058 114 7 36 chr10 132176098 132176466 -13412822 - AluSx SINE Alu 0 371 13 253 269 186 6 chr10 132176466 132176622 -13412666 - L1MC4a LINE L1 -2384 3762 3579 272 315 116 7 chr10 132176647 132176793 -13412495 + MIR SINE MIR 101 262 0 407 19 19 0 chr10 132177070 132177122 -13412166 + (TTTG)n Simple_repeat Simple_repeat 2 54 0 322 319 83 30 chr10 132177403 132177572 -13411716 - MIR SINE MIR -1 261 84 518 249 35 56 chr10 132178934 132179131 -13410157 + MER117 DNA MER1_type 4 196 -1 267 232 87 14 chr10 132180554 132180623 -13408665 - L2 LINE L2 -88 3184 3111 288 223 161 18 chr10 132180643 132180755 -13408533 + L2 LINE L2 2453 2580 -734 184 260 140 30 chr10 132180761 132180861 -13408427 + L2 LINE L2 2783 2893 -421 1234 162 57 0 chr10 132180869 132181079 -13408209 - MER46A DNA MER2_type -14 222 1 274 274 132 0 chr10 132181082 132181188 -13408100 + L2 LINE L2 2946 3065 -248 420 20 0 0 chr10 132181220 132181269 -13408019 + (TA)n Simple_repeat Simple_repeat 1 49 0 396 119 0 0 chr10 132181269 132181328 -13407960 - L1MB3 LINE L1 -35 6148 6090 563 288 33 63 chr10 132181381 132181487 -13407801 + L2 LINE L2 3051 3159 -154 15884 131 21 14 chr10 132181487 132183764 -13405524 + Tigger1 DNA MER2_type 3 2300 -118 2470 88 0 0 chr10 132183764 132184071 -13405217 - AluY SINE Alu -4 307 1 15884 131 21 14 chr10 132184071 132184191 -13405097 + Tigger1 DNA MER2_type 2300 2418 0 563 288 33 63 chr10 132184191 132184355 -13404933 + L2 LINE L2 3159 3313 0 216 251 63 48 chr10 132184448 132184571 -13404717 - L2 LINE L2 -263 3050 2925 2078 122 4 0 chr10 132185253 132185532 -13403756 + AluSg SINE Alu 1 280 -30 285 29 0 0 chr10 132185538 132185572 -13403716 + (GAAAA)n Simple_repeat Simple_repeat 2 35 0 251 314 102 17 chr10 132185572 132185690 -13403598 + MIR SINE MIR 25 152 -56 568 208 0 0 chr10 132186415 132186516 -13402772 - FLAM_A SINE Alu -41 101 1 531 106 82 0 chr10 132186547 132186632 -13402656 - L1MA5A LINE L1 -10 6287 6196 700 274 102 26 chr10 132186833 132187136 -13402152 + L1ME LINE L1 5493 5818 -352 1080 282 190 10 chr10 132187155 132187718 -13401570 + L1ME3 LINE L1 5293 5951 -219 369 284 71 41 chr10 132188720 132188889 -13400399 + L1M4 LINE L1 4151 4324 -1822 234 91 0 0 chr10 132189491 132189524 -13399764 + MER3 DNA MER1_type 17 49 -160 312 221 0 13 chr10 132189614 132189691 -13399597 + L1ME3 LINE L1 6086 6161 -1 233 297 116 43 chr10 132189697 132189835 -13399453 - MER5A DNA MER1_type -2 187 40 1437 150 0 0 chr10 132190411 132190638 -13398650 + AluSg/x SINE Alu 82 308 -2 1789 217 88 9 chr10 132190847 132191352 -13397936 - MLT1F LTR MaLR -3 539 6 617 277 153 22 chr10 132191687 132191752 -13397536 + MLT1L LTR MaLR 137 192 -423 619 123 297 77 chr10 132191752 132191830 -13397458 - MER5A DNA MER1_type 0 189 129 1774 85 0 0 chr10 132191830 132192054 -13397234 - AluSg/x SINE Alu -4 306 83 619 123 297 77 chr10 132192054 132192130 -13397158 - MER5A DNA MER1_type -60 129 1 617 277 153 22 chr10 132192130 132192468 -13396820 + MLT1L LTR MaLR 192 593 -22 419 289 89 17 chr10 132192502 132192708 -13396580 - L1MC/D LINE L1 -551 5570 5383 369 0 0 0 chr10 132193480 132193521 -13395767 + (CA)n Simple_repeat Simple_repeat 2 42 0 186 327 73 42 chr10 132194071 132194236 -13395052 - L2 LINE L2 -278 2994 2825 253 152 43 0 chr10 132194439 132194485 -13394803 - HERVK3 LTR ERVK -7195 48 1 2213 155 45 15 chr10 132194507 132194907 -13394381 - LTR3 LTR ERVK -16 416 5 392 298 98 22 chr10 132194949 132195224 -13394064 - L1ME4a LINE L1 -218 5903 5608 1920 168 35 26 chr10 132195941 132196286 -13393002 + MER7A DNA MER2_type 1 346 0 28 29 0 0 chr10 132196577 132196612 -13392676 + AT_rich Low_complexity Low_complexity 1 35 0 180 111 0 0 chr10 132197122 132197149 -13392139 + (TTCC)n Simple_repeat Simple_repeat 3 29 0 468 0 0 0 chr10 132197633 132197685 -13391603 + (TA)n Simple_repeat Simple_repeat 2 53 0 18937 177 70 63 chr10 132197734 132197819 -13391469 + L1M1 LINE L1 12 95 -7576 183 42 0 0 chr10 132197819 132197843 -13391445 + (CAAAA)n Simple_repeat Simple_repeat 1 24 0 18937 177 70 63 chr10 132197843 132199203 -13390085 + L1M1 LINE L1 95 1444 -6227 198 0 0 0 chr10 132199203 132199225 -13390063 + (GA)n Simple_repeat Simple_repeat 2 23 0 18937 177 70 63 chr10 132199225 132202331 -13386957 + L1M1 LINE L1 1444 4527 -3144 1145 133 0 12 chr10 132202331 132202496 -13386792 - AluSx SINE Alu -13 297 135 306 73 0 0 chr10 132202497 132202538 -13386750 + AluSg/x SINE Alu 151 191 -109 18937 177 70 63 chr10 132202538 132202554 -13386734 + L1M1 LINE L1 4527 4541 -3130 971 113 0 0 chr10 132202554 132202687 -13386601 - AluSx SINE Alu -179 133 1 18937 177 70 63 chr10 132202687 132204653 -13384635 + L1M1 LINE L1 4541 6928 -743 261 182 0 0 chr10 132206639 132206694 -13382594 + (TA)n Simple_repeat Simple_repeat 1 55 0 1386 145 130 125 chr10 132206849 132207242 -13382046 + MLT2C1 LTR ERVL 1 395 -2 2416 73 3 0 chr10 132207499 132207800 -13381488 - AluY SINE Alu -9 302 1 2091 135 0 13 chr10 132207918 132208273 -13381015 - AluSx SINE Alu 0 312 2 574 181 0 0 chr10 132208283 132208377 -13380911 - AluSc SINE Alu -99 210 117 802 195 0 0 chr10 132209273 132209422 -13379866 + L1 LINE L1 4522 4670 -1476 269 264 88 11 chr10 132209422 132209513 -13379775 - LTR67 LTR ERVL -31 526 429 348 267 0 0 chr10 132209901 132209991 -13379297 - MIR SINE MIR -100 162 73 1278 236 32 35 chr10 132210091 132210439 -13378849 - MLT1A2 LTR MaLR -2 372 26 441 74 12 111 chr10 132210601 132210682 -13378606 - L1PA12 LINE L1 -228 5940 5868 * 2375 111 3 0 chr10 132210678 132211002 -13378286 + L1P4 LINE L1 5441 5765 -398 380 296 16 16 chr10 132211901 132212026 -13377262 + L2 LINE L2 3143 3267 -5 1632 167 3 13 chr10 132212096 132212396 -13376892 - AluSg SINE Alu -9 301 5 759 92 0 0 chr10 132213006 132213153 -13376135 + AluSg/x SINE Alu 187 333 0 237 311 39 10 chr10 132213154 132213257 -13376031 - MIR SINE MIR -150 112 7 218 357 0 24 chr10 132213431 132213557 -13375731 + MIR SINE MIR 3 125 -137 239 315 64 57 chr10 132214606 132214920 -13374368 + L2 LINE L2 2185 2500 -814 375 237 99 88 chr10 132216903 132217199 -13372089 + L1M4 LINE L1 3022 3333 -2813 1164 188 0 5 chr10 132218153 132218360 -13370928 - AluJb SINE Alu -106 206 1 1652 177 7 7 chr10 132218551 132218850 -13370438 - AluY SINE Alu -12 299 1 472 47 0 31 chr10 132219370 132219434 -13369854 + L1PA8 LINE L1 6105 6166 -6 182 62 31 0 chr10 132220454 132220486 -13368802 + (TTTTA)n Simple_repeat Simple_repeat 3 35 0 315 29 0 0 chr10 132220486 132220521 -13368767 - L1PA6 LINE L1 -23 6131 6097 401 289 78 74 chr10 132220521 132220763 -13368525 - MLT1J LTR MaLR -45 466 224 2295 110 0 0 chr10 132221160 132221459 -13367829 - AluSx SINE Alu -13 299 1 1762 193 20 0 chr10 132221624 132221925 -13367363 + MLT1A1 LTR MaLR 1 307 -58 819 103 32 0 chr10 132221925 132222051 -13367237 + L1MA1 LINE L1 6068 6197 -105 2010 146 43 13 chr10 132222091 132222467 -13366821 + L1PB4 LINE L1 5769 6155 -1 311 182 0 0 chr10 132222529 132222584 -13366704 + MLT1A1 LTR MaLR 301 355 -10 241 146 21 42 chr10 132223369 132223417 -13365871 - MLT2E LTR ERVL -2 395 349 456 19 0 0 chr10 132223426 132223479 -13365809 + (CA)n Simple_repeat Simple_repeat 2 54 0 430 211 0 0 chr10 132223480 132223570 -13365718 - MLT2C1 LTR ERVL -306 91 2 310 195 228 16 chr10 132223824 132223947 -13365341 + MER5A DNA MER1_type 35 183 -6 1632 162 12 58 chr10 132224078 132224405 -13364883 - AluJo SINE Alu 0 312 1 1920 203 103 31 chr10 132224520 132225033 -13364255 - MER44D DNA MER2_type 0 605 1 531 249 40 28 chr10 132227549 132227726 -13361562 + MER5A DNA MER1_type 7 185 -4 612 232 7 39 chr10 132228064 132228219 -13361069 - MER5A DNA MER1_type -8 181 32 1332 208 115 88 chr10 132228571 132229119 -13360169 - MER34B LTR ERV1 -2 563 1 224 226 0 38 chr10 132229128 132229181 -13360107 + CT-rich Low_complexity Low_complexity 3 53 0 2508 59 0 7 chr10 132230466 132230771 -13358517 - AluY SINE Alu -8 303 1 28 0 0 0 chr10 132231494 132231522 -13357766 + AT_rich Low_complexity Low_complexity 1 28 0 292 293 30 10 chr10 132231854 132231953 -13357335 - MIR SINE MIR -62 146 46 410 215 59 52 chr10 132233446 132233581 -13355707 + MIR SINE MIR 127 262 0 212 258 145 16 chr10 132233572 132233696 -13355592 + L2 LINE L2 3174 3313 0 * 2595 118 3 6 chr10 132233713 132234078 -13355210 - THE1B LTR MaLR 0 364 1 862 263 48 25 chr10 132234296 132234580 -13354708 - MLT2E LTR ERVL -334 294 3 1295 217 133 26 chr10 132235860 132236325 -13352963 - L1ME3A LINE L1 -2 6168 5623 195 42 0 0 chr10 132236738 132236762 -13352526 + (TTCCC)n Simple_repeat Simple_repeat 1 24 0 1749 157 16 20 chr10 132236780 132237086 -13352202 - AluJo SINE Alu -7 305 1 1537 195 63 47 chr10 132237755 132238202 -13351086 - MLT1C LTR MaLR -8 459 6 2197 105 3 10 chr10 132238639 132238944 -13350344 + AluSg SINE Alu 1 303 -7 771 244 90 71 chr10 132239014 132239329 -13349959 - LTR33 LTR ERVL -7 514 190 1790 127 130 27 chr10 132239329 132239659 -13349629 + THE1B LTR MaLR 1 364 0 771 244 90 71 chr10 132239659 132239708 -13349580 - LTR33 LTR ERVL -331 190 143 24 67 0 0 chr10 132240188 132240233 -13349055 + AT_rich Low_complexity Low_complexity 1 45 0 21 0 0 0 chr10 132240891 132240912 -13348376 + AT_rich Low_complexity Low_complexity 1 21 0 195 161 0 0 chr10 132242675 132242706 -13346582 + L2 LINE L2 3023 3053 -219 306 0 0 0 chr10 132243427 132243461 -13345827 + (TG)n Simple_repeat Simple_repeat 2 35 0 5605 119 19 22 chr10 132243461 132244875 -13344413 + L1PA16 LINE L1 4740 6157 -9 184 129 65 0 chr10 132246122 132246153 -13343135 - MIR SINE MIR -141 67 35 1518 283 39 55 chr10 132246401 132247111 -13342177 + MER21B LTR ERV1 11 709 -154 407 91 0 0 chr10 132248067 132248122 -13341166 - Alu SINE Alu -247 55 1 232 213 66 0 chr10 132248233 132248294 -13340994 - MER5B DNA MER1_type -113 65 1 2662 100 11 3 chr10 132248624 132248985 -13340303 - THE1B LTR MaLR 0 364 1 23 68 0 0 chr10 132249466 132249510 -13339778 + AT_rich Low_complexity Low_complexity 1 44 0 222 62 0 0 chr10 132249661 132249693 -13339595 + (CA)n Simple_repeat Simple_repeat 2 33 0 423 261 70 0 chr10 132250880 132251037 -13338251 + MIR SINE MIR 19 186 -76 272 312 94 25 chr10 132251185 132251387 -13337901 + MIR SINE MIR 33 248 -14 544 278 123 74 chr10 132251993 132252887 -13336401 - L2 LINE L2 -8 3305 2368 2842 7 0 0 chr10 132253877 132254177 -13335111 + AluYa5 SINE Alu 1 300 -11 2107 203 33 13 chr10 132254533 132254991 -13334297 + MLT1C LTR MaLR 1 467 0 646 297 51 63 chr10 132255517 132255931 -13333357 + L1MC/D LINE L1 5394 5802 -2006 1834 217 89 60 chr10 132255962 132256307 -13332981 + L1ME3A LINE L1 5531 5903 -267 1216 177 44 0 chr10 132256307 132256533 -13332755 + MER46A DNA MER2_type 1 236 0 1834 217 89 60 chr10 132256533 132256804 -13332484 + L1ME3A LINE L1 5903 6165 -5 4702 154 63 6 chr10 132256804 132257518 -13331770 + L1MB4 LINE L1 5258 6032 -148 954 114 0 7 chr10 132257518 132257658 -13331630 - MER85 DNA T2_type 0 139 1 4702 154 63 6 chr10 132257658 132257815 -13331473 + L1MB4 LINE L1 6032 6179 -1 594 103 0 0 chr10 132258477 132258564 -13330724 + (GA)n Simple_repeat Simple_repeat 2 88 0 1113 204 24 52 chr10 132259209 132259639 -13329649 + MLT1A2 LTR MaLR 1 374 0 271 342 123 0 chr10 132261108 132261263 -13328025 - L2 LINE L2 -219 3053 2880 268 253 53 63 chr10 132261374 132261469 -13327819 + L2 LINE L2 3179 3272 0 2198 120 7 0 chr10 132261548 132261847 -13327441 + AluSx SINE Alu 1 301 -11 507 275 101 0 chr10 132262126 132262264 -13327024 - MIR3 SINE MIR -41 167 16 305 309 188 19 chr10 132262335 132262542 -13326746 + MIR SINE MIR 21 262 0 216 0 0 0 chr10 132262626 132262650 -13326638 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 369 370 12 0 chr10 132263078 132263251 -13326037 + (TGGA)n Simple_repeat Simple_repeat 2 176 0 2748 134 117 15 chr10 132263319 132263780 -13325508 + MLT2B2 LTR ERVL 1 508 -7 486 334 85 38 chr10 132263984 132264409 -13324879 + L2 LINE L2 218 662 -2652 * 825 265 23 14 chr10 132264398 132264617 -13324671 - MIR SINE MIR -5 257 37 471 203 17 43 chr10 132264681 132264832 -13324456 + MER3 DNA MER1_type 1 207 -2 271 345 42 42 chr10 132264852 132265110 -13324178 + L2 LINE L2 723 983 -2331 2700 183 19 25 chr10 132265110 132265155 -13324133 - MLT2B2 LTR ERVL 0 515 471 411 68 0 0 chr10 132265155 132265214 -13324074 + (TG)n Simple_repeat Simple_repeat 2 60 0 2700 183 19 25 chr10 132265214 132265686 -13323602 - MLT2B2 LTR ERVL -44 471 1 271 345 42 42 chr10 132265686 132265763 -13323525 + L2 LINE L2 982 1058 -2256 2052 230 76 16 chr10 132265777 132266858 -13322430 + MER69 DNA AcHobo 17 2526 0 473 316 136 9 chr10 132266874 132267329 -13321959 + L2 LINE L2 1064 1576 -1738 548 291 132 56 chr10 132267415 132267772 -13321516 + LTR16C LTR ERVL 81 464 -27 552 316 111 22 chr10 132267779 132268140 -13321148 + L2 LINE L2 2526 2918 -396 381 194 43 43 chr10 132268149 132268242 -13321046 + L2 LINE L2 3161 3253 -60 389 269 55 28 chr10 132269697 132269842 -13319446 - L2 LINE L2 0 3313 3165 279 298 58 81 chr10 132269953 132270077 -13319211 - L2 LINE L2 -344 2970 2845 2371 97 3 0 chr10 132270077 132270386 -13318902 + AluSq SINE Alu 2 311 -2 971 255 62 52 chr10 132270390 132270927 -13318361 - MER34 LTR ERV1 0 542 1 279 298 58 81 chr10 132270927 132271106 -13318182 - L2 LINE L2 -472 2842 2669 2152 128 0 16 chr10 132271812 132272125 -13317163 + AluSc SINE Alu 1 308 -1 417 171 0 72 chr10 132272577 132272688 -13316600 + L1PA7 LINE L1 6052 6154 0 1213 22 0 0 chr10 132273273 132273412 -13315876 - L1PA3 LINE L1 -261 5894 5756 2376 15 0 0 chr10 132273412 132273673 -13315615 + L1PA3 LINE L1 5891 6155 0 46 19 0 0 chr10 132273673 132273726 -13315562 + AT_rich Low_complexity Low_complexity 1 53 0 2264 102 7 0 chr10 132274090 132274383 -13314905 - AluSg SINE Alu -15 295 1 1297 151 19 12 chr10 132275374 132275632 -13313656 - L1MA7 LINE L1 0 6291 6032 3252 193 24 0 chr10 132275632 132276265 -13313023 + L1 LINE L1 4667 5314 -832 221 0 35 0 chr10 132276517 132276546 -13312742 + (TG)n Simple_repeat Simple_repeat 1 30 0 217 0 0 57 chr10 132276931 132276966 -13312322 + (TTTTA)n Simple_repeat Simple_repeat 2 34 0 1802 136 0 21 chr10 132276971 132277258 -13312030 - AluSx SINE Alu -31 281 1 228 229 0 0 chr10 132277632 132277680 -13311608 + (TTCA)n Simple_repeat Simple_repeat 1 48 0 274 299 216 15 chr10 132277708 132277912 -13311376 + MIR SINE MIR 5 249 -13 379 327 24 19 chr10 132277994 132278014 -13311274 - L2 LINE L2 -183 3130 3112 2536 73 3 6 chr10 132278014 132278328 -13310960 + AluSp SINE Alu 1 313 0 379 327 24 19 chr10 132278328 132278518 -13310770 - L2 LINE L2 -201 3112 2919 297 270 40 20 chr10 132278548 132278648 -13310640 + L2 LINE L2 3169 3270 -2 1046 122 0 0 chr10 132278854 132278993 -13310295 - AluSq/x SINE Alu -174 139 1 24 0 0 0 chr10 132279864 132279888 -13309400 + AT_rich Low_complexity Low_complexity 1 24 0 224 246 77 0 chr10 132280726 132280791 -13308497 - L2 LINE L2 -2 3311 3242 307 260 65 24 chr10 132281032 132281155 -13308133 + MIR SINE MIR 87 214 -48 282 293 100 77 chr10 132281143 132281714 -13307574 - L2 LINE L2 -439 2875 2292 * 275 276 8 65 chr10 132281878 132282001 -13307287 - L2 LINE L2 -225 3088 2973 253 162 42 16 chr10 132281970 132282049 -13307239 + MIR SINE MIR 87 146 -62 * 245 288 0 0 chr10 132283787 132283853 -13305435 + LTR67 LTR ERVL 484 549 -8 858 301 4 0 chr10 132284117 132284356 -13304932 + MIR SINE MIR 8 247 -15 202 303 0 0 chr10 132284782 132284848 -13304440 + T-rich Low_complexity Low_complexity 1 66 0 2113 133 3 10 chr10 132285343 132285651 -13303637 - AluSx SINE Alu -6 306 1 631 284 50 0 chr10 132285721 132285922 -13303366 - MIR SINE MIR -3 259 49 683 211 20 13 chr10 132286024 132286176 -13303112 - MER5A DNA MER1_type -34 155 3 816 189 110 22 chr10 132286465 132286692 -13302596 - MER113 DNA MER1_type? -69 452 206 747 276 69 5 chr10 132286729 132286946 -13302342 + MIR SINE MIR 25 255 -7 314 257 140 44 chr10 132287676 132287812 -13301476 - MER5A DNA MER1_type -36 153 5 1874 178 69 5 chr10 132288483 132288860 -13300428 - L1MB3 LINE L1 0 6183 5783 195 42 0 0 chr10 132288860 132288884 -13300404 + (TG)n Simple_repeat Simple_repeat 2 25 0 232 163 0 0 chr10 132288884 132288933 -13300355 + L1MC4 LINE L1 6652 6700 -1342 655 284 20 10 chr10 132290515 132290719 -13298569 + MIR SINE MIR 13 218 -44 967 290 63 37 chr10 132290803 132291261 -13298027 + LTR16C LTR ERVL 22 491 0 622 287 43 0 chr10 132292256 132292465 -13296823 - MIR SINE MIR -14 248 31 2277 112 3 0 chr10 132292827 132293130 -13296158 + AluSx SINE Alu 1 304 -8 231 153 129 35 chr10 132293354 132293439 -13295849 - MIR SINE MIR -135 127 35 672 257 129 51 chr10 132293600 132294082 -13295206 + L1MC4 LINE L1 7311 7920 -122 180 0 0 0 chr10 132294102 132294122 -13295166 + (TG)n Simple_repeat Simple_repeat 2 21 0 1072 297 79 22 chr10 132295313 132295759 -13293529 - MLT1K LTR MaLR -37 551 80 2399 196 83 2 chr10 132295759 132296239 -13293049 - LTR53 LTR ERVL 0 519 1 383 195 89 49 chr10 132297608 132297731 -13291557 - L2 LINE L2 0 3313 3186 238 303 82 41 chr10 132297740 132297862 -13291426 + MLT1K LTR MaLR 2 128 -460 204 231 0 0 chr10 132297980 132298019 -13291269 + (TATG)n Simple_repeat Simple_repeat 2 40 0 231 114 0 0 chr10 132298668 132298703 -13290585 + (TAA)n Simple_repeat Simple_repeat 1 35 0 4397 21 0 0 chr10 132299259 132299825 -13289463 - L1PA3 LINE L1 -703 5452 4887 6343 17 0 0 chr10 132299825 132300529 -13288759 + L1PA3 LINE L1 5448 6155 0 234 303 109 23 chr10 132300558 132300733 -13288555 + L3 LINE CR1 1374 1563 -14 1837 213 60 17 chr10 132301157 132301627 -13287661 - L1ME2 LINE L1 -1 6163 5674 1591 257 51 40 chr10 132301655 132302229 -13287059 + L1ME LINE L1 4797 5380 -782 1604 80 13 9 chr10 132302229 132302455 -13286833 + L1PA8 LINE L1 5944 6170 -2 1591 257 51 40 chr10 132302455 132302516 -13286772 + L1ME LINE L1 5380 5439 -723 3490 108 34 36 chr10 132302774 132303301 -13285987 + MER1A DNA MER1_type 2 527 0 2400 91 10 0 chr10 132303448 132303756 -13285532 + AluY SINE Alu 1 311 0 32988 49 13 4 chr10 132303858 132309978 -13279310 + L1PA5 LINE L1 1 6154 0 2056 146 7 0 chr10 132310235 132310543 -13278745 - AluSx SINE Alu -2 310 1 244 284 59 39 chr10 132310742 132310844 -13278444 + L3 LINE CR1 1256 1359 -218 254 225 118 112 chr10 132311213 132311391 -13277897 - MARNA DNA Mariner -217 369 191 207 175 53 0 chr10 132311919 132311976 -13277312 + (TGGG)n Simple_repeat Simple_repeat 3 62 0 819 234 114 36 chr10 132312564 132312898 -13276390 + MLT1K LTR MaLR 142 501 -87 260 350 70 10 chr10 132312983 132313183 -13276105 + L3 LINE CR1 1313 1524 -53 2210 116 0 6 chr10 132313537 132313848 -13275440 - AluSc SINE Alu 0 309 1 375 162 9 18 chr10 132314360 132314471 -13274817 + (TA)n Simple_repeat Simple_repeat 2 111 0 290 265 24 12 chr10 132314472 132314555 -13274733 - L2 LINE L2 -18 3254 3171 23 33 0 0 chr10 132315735 132315765 -13273523 + GC_rich Low_complexity Low_complexity 1 30 0 185 146 21 0 chr10 132315913 132315961 -13273327 + C-rich Low_complexity Low_complexity 4 52 0 539 306 95 0 chr10 132319261 132319493 -13269795 - MIR SINE MIR -1 261 8 477 259 26 0 chr10 132319594 132319710 -13269578 - MIR SINE MIR -110 152 34 2551 58 3 13 chr10 132321781 132322092 -13267196 - AluY SINE Alu -3 308 1 415 230 145 31 chr10 132322122 132322297 -13266991 + MIR SINE MIR 4 195 -62 212 333 0 0 chr10 132322388 132322448 -13266840 + MIR SINE MIR 2 61 -201 463 165 117 10 chr10 132322450 132322553 -13266735 - FRAM SINE Alu -11 165 52 1651 172 34 24 chr10 132322580 132322871 -13266417 - AluJb SINE Alu -18 294 1 181 283 22 33 chr10 132322872 132322964 -13266324 + MIR SINE MIR 57 147 -115 190 245 0 38 chr10 132323069 132323122 -13266166 + MIR SINE MIR 212 262 0 254 300 80 59 chr10 132324088 132324325 -13264963 + L3b LINE CR1 1156 1397 -186 272 136 0 51 chr10 132324367 132324380 -13264908 - L1ME3A LINE L1 -9 6161 6149 443 152 13 0 chr10 132324380 132324459 -13264829 + MER116 DNA Mariner 1 80 0 272 136 0 51 chr10 132324459 132324504 -13264784 - L1ME3A LINE L1 -21 6149 6106 486 246 208 4 chr10 132324565 132324825 -13264463 - L1ME3A LINE L1 -231 5933 5621 703 229 257 10 chr10 132325033 132325321 -13263967 + L1ME3A LINE L1 5621 5979 -191 240 167 0 0 chr10 132325401 132325443 -13263845 - MER116 DNA Mariner 0 80 39 2326 62 0 39 chr10 132325849 132326156 -13263132 - AluY SINE Alu -16 295 1 3411 101 14 8 chr10 132326498 132326992 -13262296 - L1PA13 LINE L1 -1 6162 5666 400 301 119 30 chr10 132327081 132327383 -13261905 + L1ME4a LINE L1 5790 6118 -3 342 279 80 72 chr10 132327607 132327980 -13261308 + L1ME4a LINE L1 5532 5907 -214 2495 74 0 0 chr10 132327994 132328293 -13260995 - AluY SINE Alu -12 299 1 672 301 117 14 chr10 132328532 132329331 -13259957 - L1MC4a LINE L1 -746 5334 4944 429 306 83 0 chr10 132329572 132329716 -13259572 + MIR SINE MIR 3 158 -104 3615 265 60 35 chr10 132330237 132332012 -13257276 - L1MC4a LINE L1 -3873 2388 571 266 302 31 21 chr10 132332256 132332352 -13256936 - L1MC4a LINE L1 -5617 453 357 1957 144 152 13 chr10 132332356 132332732 -13256556 + MSTA LTR MaLR 1 428 0 261 274 106 35 chr10 132332858 132332971 -13256317 - HAL1 LINE L1 -2386 121 1 25 0 0 0 chr10 132333026 132333051 -13256237 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr10 132333250 132333271 -13256017 + AT_rich Low_complexity Low_complexity 1 21 0 425 289 43 21 chr10 132333530 132333717 -13255571 - MIR SINE MIR 0 262 72 224 269 45 0 chr10 132334747 132334814 -13254474 - L2 LINE L2 -13 3259 3190 668 287 20 7 chr10 132335082 132335319 -13253969 - MIR SINE MIR -15 247 8 280 235 157 33 chr10 132335404 132335557 -13253731 + MIR SINE MIR 2 173 -89 346 333 16 0 chr10 132336443 132336569 -13252719 + L2 LINE L2 3141 3268 -4 795 311 79 34 chr10 132337239 132337711 -13251577 - L1ME4a LINE L1 -11 6110 5607 2390 68 0 0 chr10 132337711 132338028 -13251260 + AluY SINE Alu 1 317 0 795 311 79 34 chr10 132338028 132338110 -13251178 - L1ME4a LINE L1 -514 5607 5530 478 293 33 65 chr10 132338139 132338446 -13250842 + L2 LINE L2 3017 3313 0 745 295 38 40 chr10 132339050 132339420 -13249868 + L3 LINE CR1 535 903 -674 252 338 47 81 chr10 132339581 132339877 -13249411 + L2 LINE L2 2964 3249 -23 2151 126 63 20 chr10 132340540 132340889 -13248399 + THE1B LTR MaLR 1 364 0 3868 71 0 2 chr10 132340889 132341383 -13247905 + THE1B-int LTR MaLR 1 493 -1087 2206 81 0 28 chr10 132341391 132341676 -13247612 + AluY SINE Alu 2 278 -33 1774 170 23 42 chr10 132341676 132342185 -13247103 + MLT2A2 LTR ERVL 52 554 0 229 205 12 108 chr10 132342187 132342270 -13247018 + MIR SINE MIR 163 237 -25 2278 166 38 7 chr10 132342345 132342762 -13246526 + MSTB1 LTR MaLR 3 432 0 182 287 28 56 chr10 132342773 132342881 -13246407 - L2 LINE L2 -82 3231 3127 281 267 67 33 chr10 132342890 132343040 -13246248 - L1ME4a LINE L1 -106 6015 5861 1785 129 80 124 chr10 132343078 132343489 -13245799 - MSTD LTR MaLR 0 396 4 2111 190 68 43 chr10 132343494 132343979 -13245309 + MLT1D LTR MaLR 8 504 -1 275 233 216 17 chr10 132343981 132344097 -13245191 + L2 LINE L2 3125 3263 -9 228 183 0 33 chr10 132344464 132344524 -13244764 + A-rich Low_complexity Low_complexity 3 60 0 250 276 31 10 chr10 132344616 132344714 -13244574 - MER5B DNA MER1_type -75 103 4 206 311 14 54 chr10 132344777 132344851 -13244437 - MIR3 SINE MIR -27 181 111 403 216 17 17 chr10 132345228 132345344 -13243944 + MIR SINE MIR 117 232 -30 241 356 69 12 chr10 132346479 132346639 -13242649 - MIR3 SINE MIR -7 201 33 237 65 0 0 chr10 132347069 132347100 -13242188 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 314 141 12 24 chr10 132347108 132347231 -13242057 - MIR SINE MIR -6 256 73 453 308 76 5 chr10 132347605 132347790 -13241498 + MIR SINE MIR 52 249 -13 618 285 41 68 chr10 132348301 132348596 -13240692 - MER102b DNA MER1_type -48 293 7 576 169 0 40 chr10 132348663 132348787 -13240501 - L2 LINE L2 -2 3311 3193 325 291 118 39 chr10 132350452 132350782 -13238506 - L1MC5 LINE L1 -114 7847 7492 270 258 106 23 chr10 132351303 132351435 -13237853 - MIR SINE MIR -62 200 58 584 285 45 60 chr10 132351552 132352019 -13237269 - L1MC4 LINE L1 -1 8041 7582 2652 188 47 4 chr10 132352474 132352968 -13236320 - LTR53 LTR ERVL 0 519 5 795 275 18 0 chr10 132352986 132353208 -13236080 - MIR SINE MIR -15 247 22 375 282 9 9 chr10 132353853 132353963 -13235325 + MIR SINE MIR 80 189 -73 211 357 3 0 chr10 132354722 132354811 -13234477 - MIR SINE MIR -74 134 45 393 260 125 0 chr10 132355395 132355499 -13233789 + L2 LINE L2 3155 3271 -1 282 125 0 0 chr10 132355625 132355673 -13233615 + (GA)n Simple_repeat Simple_repeat 1 48 0 288 53 0 0 chr10 132355674 132355712 -13233576 + (TG)n Simple_repeat Simple_repeat 1 38 0 298 256 26 0 chr10 132356183 132356261 -13233027 + (TG)n Simple_repeat Simple_repeat 2 81 0 2499 67 0 0 chr10 132356527 132356825 -13232463 + AluY SINE Alu 1 298 -13 1980 124 4 0 chr10 132357420 132357693 -13231595 - AluSx SINE Alu -3 309 36 444 111 0 111 chr10 132358139 132358229 -13231059 + MADE1 DNA Mariner 1 80 0 395 165 13 0 chr10 132358299 132358378 -13230910 - MER5A DNA MER1_type -84 105 26 214 364 175 0 chr10 132358385 132358539 -13230749 + MER5A DNA MER1_type 9 189 0 525 227 101 35 chr10 132359148 132359436 -13229852 + MLT1G LTR MaLR 2 267 -323 445 228 144 50 chr10 132359816 132359996 -13229292 + MLT1G LTR MaLR 340 536 -6 249 33 0 0 chr10 132360063 132360093 -13229195 + (CATTT)n Simple_repeat Simple_repeat 4 33 0 360 269 162 48 chr10 132360236 132360403 -13228885 - MIR SINE MIR -54 208 23 217 299 81 0 chr10 132360958 132361045 -13228243 - L2 LINE L2 0 3272 3179 221 164 0 36 chr10 132361109 132361164 -13228124 + GA-rich Low_complexity Low_complexity 1 53 0 681 204 9 0 chr10 132361511 132361624 -13227664 + MER81 DNA DNA 1 114 0 2654 139 41 15 chr10 132362879 132363439 -13225849 - LTR10E LTR ERV1 0 591 1 466 267 16 18 chr10 132363820 132364012 -13225276 - MIR SINE MIR -29 233 45 498 33 0 0 chr10 132366124 132366184 -13223104 + (CAT)n Simple_repeat Simple_repeat 3 62 0 395 326 46 0 chr10 132366208 132366383 -13222905 - MIR SINE MIR -37 225 43 365 370 20 5 chr10 132367778 132367981 -13221307 + MIR SINE MIR 50 255 -7 * 404 267 53 39 chr10 132367938 132368148 -13221140 - MIR SINE MIR -23 239 28 208 184 0 41 chr10 132368309 132368358 -13220930 + MIR3 SINE MIR 111 157 -51 243 234 39 13 chr10 132368422 132368499 -13220789 + MIR SINE MIR 73 151 -111 617 336 40 16 chr10 132368707 132368957 -13220331 + MIR SINE MIR 7 262 0 249 344 96 8 chr10 132370526 132370591 -13218697 + MER5A DNA MER1_type 12 70 -119 2499 54 3 7 chr10 132370591 132370888 -13218400 + AluY SINE Alu 1 296 -15 249 344 96 8 chr10 132370888 132370947 -13218341 + MER5A DNA MER1_type 70 147 -42 671 240 136 16 chr10 132371108 132371350 -13217938 - MARNA DNA Mariner -206 380 110 1656 97 0 0 chr10 132371397 132371604 -13217684 + AluSc SINE Alu 86 292 -17 453 242 82 45 chr10 132375870 132376114 -13213174 - HAL1 LINE L1 -947 1560 1308 687 267 123 34 chr10 132376116 132377117 -13212171 - HAL1 LINE L1 -1246 1261 155 301 167 0 0 chr10 132377168 132377216 -13212072 - MLT2C1 LTR ERVL 0 397 350 247 181 28 0 chr10 132377216 132377288 -13212000 + (TCTA)n Simple_repeat Simple_repeat 2 75 0 2251 148 19 57 chr10 132377308 132377733 -13211555 - MLT2C2 LTR ERVL -55 409 1 2664 43 0 0 chr10 132378206 132378510 -13210778 - AluY SINE Alu -7 304 1 408 214 58 0 chr10 132378937 132379040 -13210248 - MER106B DNA MER1_type -15 1044 936 264 176 110 88 chr10 132379139 132379230 -13210058 - MER106B DNA MER1_type -966 93 1 1143 154 47 23 chr10 132379238 132379316 -13209972 + MER20 DNA MER1_type 1 76 -143 222 118 0 0 chr10 132379316 132379350 -13209938 + (TG)n Simple_repeat Simple_repeat 2 35 0 1143 154 47 23 chr10 132379350 132379485 -13209803 + MER20 DNA MER1_type 76 219 0 679 219 0 0 chr10 132379701 132379824 -13209464 + AluJo SINE Alu 1 123 -189 701 225 45 22 chr10 132379926 132380104 -13209184 + AluJo SINE Alu 118 299 -13 2715 232 39 44 chr10 132380285 132381087 -13208201 - L1ME2 LINE L1 -10 6223 5426 2357 81 0 53 chr10 132381219 132381539 -13207749 - AluSc SINE Alu -5 304 2 1263 231 76 10 chr10 132381541 132381947 -13207341 - L1ME2 LINE L1 -945 5270 4838 319 123 0 31 chr10 132381992 132382057 -13207231 + (CA)n Simple_repeat Simple_repeat 2 64 0 3761 40 4 4 chr10 132382057 132382511 -13206777 - L1PA7 LINE L1 -9 6145 5692 3479 176 28 75 chr10 132382573 132383124 -13206164 - L1MB8 LINE L1 -2 6176 5654 316 157 0 0 chr10 132383124 132383175 -13206113 - MADE1 DNA Mariner 0 80 30 3479 176 28 75 chr10 132383175 132383755 -13205533 - L1MB8 LINE L1 -524 5654 5048 354 251 61 100 chr10 132383766 132383997 -13205291 - L1ME2 LINE L1 -4441 1955 1734 2401 240 60 27 chr10 132384016 132385313 -13203975 - L1M4c LINE L1 -4442 2696 1217 1485 229 73 20 chr10 132385318 132385855 -13203433 - L1MB8 LINE L1 -3200 2946 2382 3870 185 27 29 chr10 132386154 132387017 -13202271 + L1 LINE L1 4461 5321 -825 242 266 123 13 chr10 132388844 132388998 -13200290 + MIR SINE MIR 20 190 -72 454 224 72 8 chr10 132389051 132389176 -13200112 - MER94 DNA DNA 0 134 2 188 237 0 17 chr10 132390286 132390345 -13198943 + CT-rich Low_complexity Low_complexity 1 58 0 249 33 0 0 chr10 132390739 132390769 -13198519 + (TTTTC)n Simple_repeat Simple_repeat 2 31 0 963 85 23 0 chr10 132390776 132390905 -13198383 - AluSg/x SINE Alu -31 281 150 492 274 83 2 chr10 132393889 132394099 -13195189 + MIR SINE MIR 30 262 0 231 36 0 0 chr10 132396392 132396420 -13192868 + (ATG)n Simple_repeat Simple_repeat 2 29 0 183 271 62 52 chr10 132397024 132397120 -13192168 + MIR SINE MIR 28 124 -84 388 301 92 35 chr10 132397549 132397778 -13191510 + MIR SINE MIR 2 243 -19 369 288 15 23 chr10 132398319 132398451 -13190837 - MIR SINE MIR -58 150 20 247 175 16 16 chr10 132399114 132399177 -13190111 + (TA)n Simple_repeat Simple_repeat 2 64 0 379 198 157 8 chr10 132399303 132399424 -13189864 + MIR SINE MIR 55 193 -69 301 234 75 0 chr10 132400023 132400117 -13189171 - MIR SINE MIR -83 179 79 272 209 47 35 chr10 132400260 132400346 -13188942 + MLT1D LTR MaLR 6 92 -375 628 226 12 14 chr10 132400347 132400518 -13188770 + L1MA9 LINE L1 6092 6255 -45 369 224 56 19 chr10 132400546 132400653 -13188635 + MLT1D LTR MaLR 79 189 -316 2087 128 0 20 chr10 132400656 132400961 -13188327 + AluSc SINE Alu 1 299 -10 259 219 31 16 chr10 132401265 132401329 -13187959 + CT-rich Low_complexity Low_complexity 4 68 0 922 271 9 0 chr10 132402674 132402892 -13186396 + MER58A DNA MER1_type 1 220 -4 531 0 0 0 chr10 132403465 132403524 -13185764 + (TC)n Simple_repeat Simple_repeat 2 60 0 297 0 0 0 chr10 132403523 132403556 -13185732 + (TG)n Simple_repeat Simple_repeat 2 34 0 * 464 306 40 5 chr10 132403987 132404186 -13185102 + L2 LINE L2 2688 2893 -421 610 303 52 4 chr10 132404198 132404429 -13184859 - MIR SINE MIR -3 259 18 410 321 15 15 chr10 132404551 132404688 -13184600 + LTR16C LTR ERVL 33 169 -322 22 0 0 0 chr10 132405104 132405126 -13184162 + AT_rich Low_complexity Low_complexity 1 22 0 241 109 455 0 chr10 132405327 132405382 -13183906 + MADE1 DNA Mariner 1 80 0 303 271 188 0 chr10 132405874 132405970 -13183318 - L2 LINE L2 -4 3268 3155 473 285 139 0 chr10 132405972 132406144 -13183144 - MER91A DNA MER1_type 0 196 1 393 286 58 13 chr10 132406657 132406811 -13182477 + MIR SINE MIR 40 200 -62 1718 120 0 12 chr10 132407248 132407489 -13181799 - AluSg SINE Alu -15 295 58 4042 164 32 4 chr10 132409065 132409750 -13179538 - L1MB3 LINE L1 -1 6182 5479 2223 154 40 35 chr10 132411201 132411748 -13177540 + MLT2A2 LTR ERVL 1 554 0 254 262 97 10 chr10 132413304 132413407 -13175881 + MIR SINE MIR 78 189 -73 6438 120 0 0 chr10 132413548 132414483 -13174805 - L1PA15 LINE L1 -4 6161 5218 222 37 0 0 chr10 132414554 132414581 -13174707 + (TTA)n Simple_repeat Simple_repeat 2 28 0 5585 240 94 26 chr10 132414582 132417270 -13172018 + L1ME2 LINE L1 3214 6089 -75 344 287 65 46 chr10 132417450 132417558 -13171730 + L2 LINE L2 3155 3264 -8 210 219 0 0 chr10 132417597 132417638 -13171650 + (TGG)n Simple_repeat Simple_repeat 2 42 0 387 0 0 0 chr10 132417639 132417682 -13171606 + (TG)n Simple_repeat Simple_repeat 1 43 0 2032 150 37 62 chr10 132418679 132419053 -13170235 + MLT1A1 LTR MaLR 1 365 0 4913 184 34 10 chr10 132419116 132420031 -13169257 - MSTA-int LTR MaLR -714 937 1 2378 129 135 5 chr10 132420031 132420410 -13168878 - MSTA LTR MaLR 0 428 1 201 39 0 0 chr10 132421149 132421175 -13168113 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 409 298 65 8 chr10 132421238 132421362 -13167926 - L2 LINE L2 0 3272 3142 691 298 81 0 chr10 132422083 132422281 -13167007 - MIR SINE MIR -4 258 45 566 66 53 0 chr10 132422320 132422396 -13166892 + MADE1 DNA Mariner 1 80 0 47 33 0 0 chr10 132423471 132423532 -13165756 + AT_rich Low_complexity Low_complexity 1 61 0 1202 254 89 45 chr10 132423736 132423872 -13165416 - L1ME3A LINE L1 -219 5934 5805 2105 124 3 25 chr10 132423872 132424187 -13165101 - AluSx SINE Alu -2 310 3 1202 254 89 45 chr10 132424187 132424778 -13164510 - L1ME3A LINE L1 -348 5805 5173 4712 164 27 30 chr10 132425037 132425895 -13163393 + Tigger2 DNA MER2_type 1 855 -1863 342 98 0 235 chr10 132425895 132425945 -13163343 - MADE1 DNA Mariner 0 80 64 2225 129 0 0 chr10 132425945 132426248 -13163040 + AluSx SINE Alu 1 303 -9 342 98 0 235 chr10 132426248 132426299 -13162989 - MADE1 DNA Mariner -16 64 3 962 161 19 12 chr10 132426300 132426461 -13162827 + Tigger2 DNA MER2_type 2557 2718 0 539 313 140 5 chr10 132426618 132427017 -13162271 - L1ME3A LINE L1 -964 5165 4713 675 256 41 12 chr10 132427093 132427378 -13161910 - MLT1I LTR MaLR -48 361 41 1364 296 104 46 chr10 132427436 132428430 -13160858 - L1ME3A LINE L1 -1500 4629 3694 2055 125 3 0 chr10 132428430 132428717 -13160571 + AluSq SINE Alu 1 288 -25 180 0 0 0 chr10 132428723 132428743 -13160545 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 1364 296 104 46 chr10 132428743 132428990 -13160298 - L1ME3A LINE L1 -2439 3690 3459 2797 6 13 0 chr10 132428990 132429304 -13159984 + AluYb8 SINE Alu 1 318 0 1364 296 104 46 chr10 132429304 132430285 -13159003 - L1ME3A LINE L1 -2670 3459 2260 22 56 0 0 chr10 132430297 132430333 -13158955 + AT_rich Low_complexity Low_complexity 1 36 0 440 18 18 0 chr10 132430773 132430830 -13158458 + (TG)n Simple_repeat Simple_repeat 1 58 0 1285 287 72 70 chr10 132430866 132432008 -13157280 - L1MEd LINE L1 -4755 1555 370 2171 112 0 38 chr10 132432008 132432322 -13156966 - AluSx SINE Alu -10 302 1 1285 287 72 70 chr10 132432322 132432625 -13156663 - L1MEd LINE L1 -5940 370 69 2172 115 0 3 chr10 132434426 132434722 -13154566 + AluSx SINE Alu 3 297 -15 209 286 18 0 chr10 132435271 132435327 -13153961 - L2 LINE L2 -22 3291 3235 425 281 56 19 chr10 132435454 132435614 -13153674 + MIR SINE MIR 79 244 -18 368 20 20 0 chr10 132436562 132436611 -13152677 + (TG)n Simple_repeat Simple_repeat 2 51 0 24 0 0 0 chr10 132439282 132439306 -13149982 + AT_rich Low_complexity Low_complexity 1 24 0 892 172 0 49 chr10 132439373 132439437 -13149851 - Tigger2 DNA MER2_type 0 2708 2642 2102 116 103 3 chr10 132439437 132439757 -13149531 + THE1A LTR MaLR 4 355 0 892 172 0 49 chr10 132439757 132439855 -13149433 - Tigger2 DNA MER2_type -66 2642 2554 * 969 176 39 10 chr10 132439854 132440058 -13149230 - Tigger2 DNA MER2_type -2508 210 1 2005 82 8 0 chr10 132440289 132440545 -13148743 + L1PA5 LINE L1 5897 6154 0 205 306 139 9 chr10 132440825 132440933 -13148355 - MIR SINE MIR -69 139 18 25 31 0 0 chr10 132441559 132441591 -13147697 + AT_rich Low_complexity Low_complexity 1 32 0 1976 123 0 4 chr10 132441634 132441947 -13147341 - AluSx SINE Alu 0 321 10 634 269 7 0 chr10 132441964 132442105 -13147183 - FRAM SINE Alu -26 150 9 1949 148 159 8 chr10 132442954 132443326 -13145962 + MSTA LTR MaLR 1 428 0 4048 75 5 12 chr10 132443848 132444424 -13144864 + L1P LINE L1 3141 3712 -2434 303 324 50 32 chr10 132444461 132444680 -13144608 - L2 LINE L2 -1701 1613 1391 202 191 24 0 chr10 132444696 132444738 -13144550 - L2 LINE L2 -2084 1230 1188 4379 202 25 8 chr10 132445394 132446613 -13142675 - L1 LINE L1 -2074 4072 2789 750 217 109 38 chr10 132446756 132446940 -13142348 + MER67D LTR ERV1 202 534 -127 367 190 25 0 chr10 132446928 132447007 -13142281 + MER67D LTR ERV1 434 514 0 * 219 357 92 0 chr10 132447072 132447170 -13142118 + MIR SINE MIR 18 124 -84 1351 196 45 14 chr10 132448087 132448373 -13140915 + AluJo SINE Alu 6 300 -12 1928 158 27 38 chr10 132448375 132448742 -13140546 + L1MB8 LINE L1 5816 6178 0 701 274 61 69 chr10 132448789 132449150 -13140138 + HAL1 LINE L1 23 380 -2127 193 29 59 0 chr10 132449217 132449251 -13140037 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 24 0 0 0 chr10 132449500 132449524 -13139764 + GC_rich Low_complexity Low_complexity 1 24 0 210 206 0 79 chr10 132452214 132452277 -13137011 + CT-rich Low_complexity Low_complexity 5 62 0 22 0 0 0 chr10 132452984 132453006 -13136282 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr10 132453076 132453098 -13136190 + AT_rich Low_complexity Low_complexity 1 22 0 945 114 0 36 chr10 132454149 132454289 -13134999 - FLAM_C SINE Alu -8 135 1 374 339 26 0 chr10 132454322 132454437 -13134851 + L2 LINE L2 3138 3255 -17 846 245 27 0 chr10 132456223 132456407 -13132881 - MER5A DNA MER1_type 0 189 1 202 267 100 0 chr10 132456591 132456651 -13132637 - MIR SINE MIR -194 68 3 340 118 20 0 chr10 132457052 132457103 -13132185 - MER4A LTR ERV1 -350 314 263 * 473 135 73 21 chr10 132457102 132457198 -13132090 - MER4A LTR ERV1 -563 101 1 181 241 35 17 chr10 132457415 132457473 -13131815 + MIR SINE MIR 183 241 -21 23 54 0 0 chr10 132457473 132457510 -13131778 + AT_rich Low_complexity Low_complexity 1 37 0 1392 169 4 30 chr10 132458637 132458904 -13130384 + MER4A LTR ERV1 405 664 0 2192 119 20 0 chr10 132459095 132459398 -13129890 + AluSq SINE Alu 1 309 -4 210 361 81 30 chr10 132459408 132459743 -13129545 - L2 LINE L2 -422 2892 2541 321 284 52 74 chr10 132460274 132460503 -13128785 - L2 LINE L2 -2 3311 3088 2087 140 3 3 chr10 132460544 132460852 -13128436 - AluSx SINE Alu -4 308 1 2138 124 0 0 chr10 132461923 132462213 -13127075 - AluSx SINE Alu -1 311 22 613 121 0 0 chr10 132462213 132462296 -13126992 - AluS SINE Alu -229 84 2 572 324 14 5 chr10 132463602 132463812 -13125476 + L2 LINE L2 1844 2055 -1259 1058 152 0 0 chr10 132463874 132464032 -13125256 - AluSc SINE Alu -17 292 135 223 329 12 75 chr10 132464142 132464303 -13124985 + L2 LINE L2 2276 2426 -888 405 0 0 0 chr10 132465100 132465145 -13124143 + (CA)n Simple_repeat Simple_repeat 1 45 0 973 188 117 78 chr10 132465359 132465668 -13123620 - MLT1A1 LTR MaLR -32 333 13 311 277 21 7 chr10 132466077 132466198 -13123090 + MIR SINE MIR 15 134 -74 215 229 21 0 chr10 132466331 132466379 -13122909 + GA-rich Low_complexity Low_complexity 4 52 0 234 351 21 0 chr10 132466483 132466577 -13122711 + MER5A DNA MER1_type 94 189 0 9525 60 2 1 chr10 132467582 132468802 -13120486 - L1P LINE L1 -3545 2601 1380 195 42 0 0 chr10 132470385 132470409 -13118879 + (GGGA)n Simple_repeat Simple_repeat 3 26 0 212 317 46 63 chr10 132470409 132470693 -13118595 - L2 LINE L2 -824 2490 2212 202 295 13 13 chr10 132470793 132470871 -13118417 + MIR SINE MIR 168 245 -17 1765 126 4 0 chr10 132471346 132471585 -13117703 - AluSg SINE Alu -70 240 1 272 286 160 0 chr10 132471702 132471821 -13117467 - MIR SINE MIR -120 142 5 180 210 16 48 chr10 132471923 132471985 -13117303 - L2 LINE L2 -3 3269 3210 282 221 0 15 chr10 132472423 132472491 -13116797 - L1ME4a LINE L1 0 6121 6055 200 150 0 50 chr10 132474991 132475031 -13114257 - L2 LINE L2 -12 3260 3223 7593 110 12 0 chr10 132476864 132477970 -13111318 - L1P LINE L1 -3702 2444 1326 270 0 0 0 chr10 132478266 132478296 -13110992 + (TG)n Simple_repeat Simple_repeat 1 30 0 512 308 89 41 chr10 132478800 132479092 -13110196 + MLT1K LTR MaLR 14 319 -269 653 178 0 0 chr10 132479487 132479588 -13109700 - AluJ/FLAM SINE Alu -210 102 2 333 307 192 2 chr10 132480092 132480243 -13109045 + MIR SINE MIR 20 197 -65 1574 146 38 13 chr10 132480273 132480588 -13108700 - MER33 DNA MER1_type -1 323 1 331 339 75 11 chr10 132480917 132481103 -13108185 - L3 LINE CR1 -14 1563 1366 470 182 13 0 chr10 132481332 132481409 -13107879 - MER30 DNA MER1_type 0 230 153 1926 88 23 4 chr10 132481426 132481689 -13107599 - L1PA6 LINE L1 -5 6149 5882 1761 144 34 34 chr10 132482014 132482306 -13106982 + AluJb SINE Alu 4 295 -17 438 285 7 7 chr10 132483564 132483708 -13105580 - MIR SINE MIR -2 260 117 2417 73 0 13 chr10 132483889 132484192 -13105096 + AluY SINE Alu 1 299 -12 2980 234 38 7 chr10 132484982 132485819 -13103469 - L1 LINE L1 -2490 3656 2794 653 94 0 0 chr10 132486167 132486252 -13103036 - AluY SINE Alu -224 86 2 2048 129 44 0 chr10 132486597 132486891 -13102397 - AluJb SINE Alu -5 307 1 581 193 32 86 chr10 132486916 132487103 -13102185 + MLT2B2 LTR ERVL 3 179 -336 769 179 8 0 chr10 132487103 132487226 -13102062 - LTR8 LTR ERV1 0 691 568 240 246 116 7 chr10 132488094 132488229 -13101059 + HAL1b LINE L1 482 575 -773 305 309 0 11 chr10 132488289 132488383 -13100905 - HAL1b LINE L1 -1197 151 59 225 0 0 0 chr10 132488591 132488616 -13100672 + (TA)n Simple_repeat Simple_repeat 1 25 0 826 73 0 0 chr10 132490083 132490192 -13099096 - L1P LINE L1 -5129 1017 909 3200 61 13 30 chr10 132490192 132490689 -13098599 + L1PA4 LINE L1 5686 6174 0 2029 127 23 10 chr10 132492417 132492724 -13096564 + AluSx SINE Alu 2 312 0 22 70 0 0 chr10 132493046 132493089 -13096199 + AT_rich Low_complexity Low_complexity 1 43 0 1600 202 24 48 chr10 132493672 132494049 -13095239 - MLT1A2 LTR MaLR -4 370 3 1058 76 48 0 chr10 132494274 132494446 -13094842 + HUERS-P3b LTR ERV1 3442 6314 -1104 430 262 168 0 chr10 132495420 132495569 -13093719 + MER5A DNA MER1_type 16 189 0 1083 235 177 45 chr10 132496309 132496705 -13092583 - Zaphod DNA AcHobo -3512 519 72 367 306 65 18 chr10 132497119 132497289 -13091999 + MIR3 SINE MIR 26 203 -5 280 295 36 45 chr10 132497468 132497580 -13091708 - L2 LINE L2 -4 3268 3158 901 266 94 16 chr10 132497800 132498236 -13091052 - L1ME LINE L1 -3474 2606 2137 1131 289 49 66 chr10 132498277 132499515 -13089773 - L1ME LINE L1 -4166 2095 839 2254 115 0 0 chr10 132499515 132499811 -13089477 - AluSx SINE Alu -16 296 1 1131 289 49 66 chr10 132499811 132500028 -13089260 - L1ME LINE L1 -5422 839 620 459 280 104 28 chr10 132500398 132500474 -13088814 - MER91A DNA MER1_type 0 196 127 1546 213 107 74 chr10 132500474 132500977 -13088311 - MLT2B1 LTR ERVL 0 520 1 459 280 104 28 chr10 132500977 132501082 -13088206 - MER91A DNA MER1_type -69 127 1 293 316 90 4 chr10 132502458 132502736 -13086552 + L2 LINE L2 2310 2611 -703 14675 45 2 4 chr10 132502902 132505467 -13083821 - L1PA7 LINE L1 0 6154 3593 47 33 0 0 chr10 132507237 132507298 -13081990 + AT_rich Low_complexity Low_complexity 1 61 0 512 199 29 15 chr10 132507502 132507638 -13081650 - L1ME3A LINE L1 -219 5951 5814 2031 139 3 25 chr10 132507638 132507955 -13081333 - AluSx SINE Alu -2 310 1 243 103 0 0 chr10 132509165 132509204 -13080084 + (GGGA)n Simple_repeat Simple_repeat 2 40 0 269 219 219 55 chr10 132509329 132509361 -13079927 - L2 LINE L2 0 3313 3288 1855 189 52 71 chr10 132509361 132509837 -13079451 + MLT1C LTR MaLR 1 467 0 269 219 219 55 chr10 132509837 132509932 -13079356 - L2 LINE L2 -25 3288 3165 607 212 45 8 chr10 132509932 132510064 -13079224 + MER58B DNA MER1_type 205 341 0 683 292 103 20 chr10 132510064 132510681 -13078607 - L2 LINE L2 -117 3196 2511 342 0 0 0 chr10 132511275 132511313 -13077975 + (TG)n Simple_repeat Simple_repeat 2 39 0 231 125 0 0 chr10 132511314 132511354 -13077934 + (CAGAGA)n Simple_repeat Simple_repeat 2 41 0 429 291 96 14 chr10 132511481 132511701 -13077587 + MER41B LTR ERV1 188 425 -210 2400 56 12 41 chr10 132511812 132512131 -13077157 - AluY SINE Alu -1 310 1 937 152 5 73 chr10 132513843 132514047 -13075241 - MER20 DNA MER1_type 0 219 30 285 158 158 26 chr10 132515178 132515254 -13074034 - L3 LINE CR1 -909 668 583 275 328 23 0 chr10 132516239 132516367 -13072921 - MARNA DNA Mariner -207 379 249 396 355 30 30 chr10 132517071 132517240 -13072048 - L2 LINE L2 0 3272 3104 233 345 14 42 chr10 132517289 132517431 -13071857 - L2 LINE L2 -816 2498 2361 13708 223 32 38 chr10 132517778 132519429 -13069859 - L1PA8A LINE L1 -288 6047 4387 1863 214 33 0 chr10 132519429 132519765 -13069523 + MER7A DNA MER2_type 2 346 0 13708 223 32 38 chr10 132519765 132521022 -13068266 - L1PA8A LINE L1 -1948 4387 3124 422 203 0 13 chr10 132521022 132521101 -13068187 + Tigger5 DNA MER2_type 2 79 -2244 13708 223 32 38 chr10 132521101 132521138 -13068150 - L1PA8A LINE L1 -3211 3124 3088 362 247 65 0 chr10 132521138 132521215 -13068073 + Tigger5 DNA MER2_type 2242 2323 0 13708 223 32 38 chr10 132521215 132522381 -13066907 - L1PA8A LINE L1 -3247 3088 1916 1611 161 77 30 chr10 132522381 132522679 -13066609 - AluJb SINE Alu 0 312 1 13708 223 32 38 chr10 132522679 132523915 -13065373 - L1PA8A LINE L1 -4419 1916 632 1992 277 50 24 chr10 132523921 132524538 -13064750 - L1M3b LINE L1 -5537 1500 868 572 214 2 14 chr10 132524756 132524873 -13064415 - L1M3b LINE L1 -6177 860 1 1955 125 3 27 chr10 132524885 132525182 -13064106 - AluSx SINE Alu -17 295 6 415 218 99 111 chr10 132526743 132527053 -13062235 - MLT1J2 LTR MaLR -2 448 100 320 335 40 54 chr10 132527328 132527624 -13061664 + L2 LINE L2 3021 3312 -1 250 233 0 17 chr10 132527639 132527699 -13061589 - MER5A DNA MER1_type -124 65 7 401 348 75 5 chr10 132528798 132528985 -13060303 + MIR SINE MIR 10 209 -53 2184 227 99 32 chr10 132529285 132529949 -13059339 - L1ME2 LINE L1 -1 6958 6250 1496 245 74 94 chr10 132529939 132530807 -13058481 - L1ME2 LINE L1 -4191 2931 1933 * 440 53 0 0 chr10 132530807 132530864 -13058424 - L1PA4 LINE L1 -1 6154 6098 1496 245 74 94 chr10 132530864 132530956 -13058332 - L1ME2 LINE L1 -5189 1933 1841 201 74 0 0 chr10 132530957 132530984 -13058304 + (TCTA)n Simple_repeat Simple_repeat 2 28 0 434 289 47 26 chr10 132530990 132531222 -13058066 - L1ME2 LINE L1 -5109 2013 1777 1947 57 0 0 chr10 132531238 132531468 -13057820 + AluY SINE Alu 77 306 -5 2045 134 0 3 chr10 132531612 132531904 -13057384 - AluSx SINE Alu -21 291 1 801 273 70 25 chr10 132531904 132532210 -13057078 - L1ME2 LINE L1 -4972 1451 1129 486 33 0 0 chr10 132532774 132532834 -13056454 + (TG)n Simple_repeat Simple_repeat 1 60 0 2099 111 0 4 chr10 132532834 132533114 -13056174 - AluSx SINE Alu -33 279 1 839 161 0 56 chr10 132533772 132533915 -13055373 + AluJo SINE Alu 2 136 -176 2098 137 0 22 chr10 132534028 132534343 -13054945 + AluSx SINE Alu 1 308 -4 1795 192 0 7 chr10 132534870 132535177 -13054111 - AluJo SINE Alu -7 305 1 195 239 119 15 chr10 132538350 132538417 -13050871 + MIR SINE MIR 139 212 -50 1121 198 28 0 chr10 132538720 132538932 -13050356 + MER20 DNA MER1_type 1 218 -1 235 237 17 17 chr10 132539621 132539680 -13049608 + MIR3 SINE MIR 105 163 -45 471 73 0 0 chr10 132541135 132541203 -13048085 + (GTTTG)n Simple_repeat Simple_repeat 2 69 0 1871 239 122 56 chr10 132541395 132542292 -13046996 + L1MC5 LINE L1 6628 7528 -433 4265 73 2 48 chr10 132542509 132543086 -13046202 + L1PA8 LINE L1 5620 6169 -3 211 322 33 11 chr10 132543247 132543337 -13045951 + MER5A DNA MER1_type 97 188 -1 679 224 78 0 chr10 132543346 132543553 -13045735 + MER5A DNA MER1_type 3 189 0 219 311 59 117 chr10 132544675 132545016 -13044272 - L2 LINE L2 -39 3233 2913 386 303 56 51 chr10 132545174 132545408 -13043880 - MIR SINE MIR -6 256 22 245 308 128 73 chr10 132546426 132546901 -13042387 - L2 LINE L2 0 3272 2771 772 160 27 7 chr10 132546915 132547065 -13042223 - MER5B DNA MER1_type -6 172 20 222 150 0 0 chr10 132547065 132547105 -13042183 + (TGAA)n Simple_repeat Simple_repeat 4 43 0 245 289 0 24 chr10 132547263 132547346 -13041942 + MIR SINE MIR 10 90 -172 224 262 47 28 chr10 132547389 132547496 -13041792 - L2 LINE L2 -592 2722 2614 292 351 96 56 chr10 132547644 132547779 -13041509 - L3 LINE CR1 -220 1357 1229 2278 86 0 20 chr10 132547779 132548082 -13041206 - AluSg SINE Alu -13 297 1 292 351 96 56 chr10 132548082 132548197 -13041091 - L3 LINE CR1 -348 1229 1097 353 307 92 12 chr10 132548615 132548778 -13040510 - MIR SINE MIR -4 258 83 9047 169 13 20 chr10 132548877 132555168 -13034120 + L1PA10 LINE L1 2 6463 -20 180 0 0 0 chr10 132555168 132555188 -13034100 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 9047 169 13 20 chr10 132555188 132555203 -13034085 + L1PA10 LINE L1 6463 6477 -6 260 254 54 54 chr10 132555344 132555529 -13033759 + L2 LINE L2 3129 3313 0 595 269 128 18 chr10 132555622 132555841 -13033447 + MIR SINE MIR 19 261 -1 220 348 43 0 chr10 132555930 132555999 -13033289 - L2 LINE L2 -40 3232 3161 1406 205 43 36 chr10 132556133 132556484 -13032804 + MSTD LTR MaLR 1 396 0 189 0 0 0 chr10 132557728 132557749 -13031539 + (A)n Simple_repeat Simple_repeat 1 21 0 2266 117 3 0 chr10 132557754 132558054 -13031234 + AluSq SINE Alu 1 301 -12 338 268 64 25 chr10 132558798 132558955 -13030333 - L1ME4a LINE L1 -148 5973 5811 1025 194 104 5 chr10 132559125 132559336 -13029952 - MER46A DNA MER2_type -3 233 2 26 0 0 0 chr10 132559439 132559465 -13029823 + AT_rich Low_complexity Low_complexity 1 26 0 2128 130 3 0 chr10 132559918 132560218 -13029070 + AluSx SINE Alu 1 301 -11 198 223 58 78 chr10 132560266 132560369 -13028919 - L2 LINE L2 -62 3251 3151 310 401 28 22 chr10 132560736 132561053 -13028235 - HAL1b LINE L1 -662 686 368 394 324 72 44 chr10 132561068 132561386 -13027902 - HAL1b LINE L1 -962 386 60 383 259 52 26 chr10 132561758 132561874 -13027414 + L2 LINE L2 3152 3270 -2 282 29 0 0 chr10 132562441 132562476 -13026812 + (TC)n Simple_repeat Simple_repeat 1 35 0 * 432 0 0 0 chr10 132562475 132562523 -13026765 + (CA)n Simple_repeat Simple_repeat 1 48 0 398 237 88 44 chr10 132564285 132564399 -13024889 + LTR8A LTR ERV1 609 727 0 2342 114 3 0 chr10 132564488 132564796 -13024492 + AluSq SINE Alu 1 309 -4 2439 105 0 9 chr10 132565845 132566160 -13023128 + AluSx SINE Alu 1 312 0 354 327 18 0 chr10 132566336 132566449 -13022839 + L2 LINE L2 3153 3267 -5 271 345 186 0 chr10 132566725 132566870 -13022418 + MIR3 SINE MIR 31 202 -6 2503 63 0 41 chr10 132568371 132568690 -13020598 - AluY SINE Alu -5 306 1 435 115 83 31 chr10 132568885 132568981 -13020307 - AluSc SINE Alu -194 115 15 339 319 21 21 chr10 132570099 132570240 -13019048 - HAL1b LINE L1 -1149 199 59 783 95 103 0 chr10 132570267 132570393 -13018895 + MER85 DNA T2_type 1 139 0 568 191 158 44 chr10 132571468 132571651 -13017637 + MER3 DNA MER1_type 6 209 0 1332 216 52 12 chr10 132572119 132572447 -13016841 + MER58B DNA MER1_type 1 341 0 455 311 123 5 chr10 132573744 132573956 -13015332 + MIR SINE MIR 7 243 -19 3105 227 19 17 chr10 132575640 132576415 -13012873 + L1ME1 LINE L1 5398 6333 -1 330 312 43 14 chr10 132576415 132576553 -13012735 + L2 LINE L2 3172 3313 0 207 295 70 39 chr10 132577371 132577500 -13011788 - L2 LINE L2 -2 3311 3179 211 297 0 27 chr10 132577559 132577633 -13011655 + MER5B DNA MER1_type 27 98 -80 1366 138 59 4 chr10 132577749 132578003 -13011285 - L1MB3 LINE L1 -3 6180 5913 1097 210 109 34 chr10 132579334 132579720 -13009568 - MER69 DNA AcHobo -97 2429 2015 1626 260 137 10 chr10 132579723 132580227 -13009061 - MER69 DNA AcHobo -1958 568 1 282 280 136 23 chr10 132580253 132580385 -13008903 + MIR SINE MIR 65 211 -51 446 296 109 42 chr10 132580391 132580793 -13008495 - MLT1J2 LTR MaLR -21 429 1 309 258 0 0 chr10 132580889 132580955 -13008333 - Charlie8 DNA MER1_type -1001 1416 1351 484 314 20 16 chr10 132580959 132581190 -13008098 - Charlie8 DNA MER1_type -2131 286 90 269 252 130 23 chr10 132581194 132581325 -13007963 - MLT1H1 LTR MaLR -5 550 406 983 209 62 0 chr10 132581581 132581792 -13007496 + MER58A DNA MER1_type 1 224 0 2872 10 0 0 chr10 132581878 132582183 -13007105 - AluYb8 SINE Alu -13 305 1 361 277 71 23 chr10 132582185 132582329 -13006959 - MIR SINE MIR -61 147 36 2416 94 0 0 chr10 132583720 132584028 -13005260 - AluSx SINE Alu -4 308 1 221 311 212 7 chr10 132584630 132584781 -13004507 + MIR3 SINE MIR 3 184 -24 320 217 19 66 chr10 132585558 132585664 -13003624 - MIR SINE MIR -60 148 48 198 337 12 12 chr10 132585928 132586011 -13003277 - MIR SINE MIR -12 250 168 23 0 0 0 chr10 132586596 132586619 -13002669 + AT_rich Low_complexity Low_complexity 1 23 0 2419 221 52 9 chr10 132586944 132587500 -13001788 - MER74B LTR ERVL 0 622 43 363 282 57 24 chr10 132588156 132588280 -13001008 - L2 LINE L2 -7 3265 3138 2626 157 0 30 chr10 132589126 132589565 -12999723 - MSTC LTR MaLR -2 426 1 266 286 105 38 chr10 132589579 132589712 -12999576 + L2 LINE L2 3172 3313 0 206 235 12 59 chr10 132590042 132590127 -12999161 + L2 LINE L2 2566 2646 -668 238 272 48 29 chr10 132590392 132590495 -12998793 + L2 LINE L2 2950 3054 -218 184 263 68 45 chr10 132591303 132591436 -12997852 - MER5B DNA MER1_type -36 142 7 214 261 0 0 chr10 132591552 132591598 -12997690 + (CA)n Simple_repeat Simple_repeat 1 46 0 195 331 15 59 chr10 132591782 132591918 -12997370 - L2 LINE L2 -7 3265 3136 421 316 96 45 chr10 132592088 132592273 -12997015 - HAL1 LINE L1 -26 2481 2270 2386 69 3 3 chr10 132592273 132592561 -12996727 - AluSp SINE Alu -25 288 1 421 316 96 45 chr10 132592561 132592707 -12996581 - HAL1 LINE L1 -237 2270 2133 1165 278 92 16 chr10 132592724 132593160 -12996128 - HAL1 LINE L1 -444 2063 1595 1012 227 118 0 chr10 132593160 132593389 -12995899 - LTR16C LTR ERVL 0 491 236 2076 257 149 34 chr10 132593567 132594607 -12994681 - HAL1 LINE L1 -930 1577 418 710 263 80 0 chr10 132594748 132594961 -12994327 - HAL1 LINE L1 -2275 232 3 873 218 56 0 chr10 132595714 132595893 -12993395 + MER5A DNA MER1_type 1 189 0 273 265 276 32 chr10 132597106 132597291 -12991997 + MIR SINE MIR 6 235 -27 * 395 298 21 53 chr10 132597273 132597461 -12991827 - MIR SINE MIR -21 241 60 760 288 93 16 chr10 132597568 132597999 -12991289 - LTR16B LTR ERVL 0 464 1 2230 76 0 35 chr10 132598146 132598435 -12990853 - AluSx SINE Alu -32 280 2 202 259 0 35 chr10 132599326 132599384 -12989904 + L2 LINE L2 3253 3308 -5 432 302 70 0 chr10 132599843 132600054 -12989234 - MIR SINE MIR -26 236 7 1598 255 130 7 chr10 132600206 132600758 -12988530 + L1ME3A LINE L1 5510 6129 -41 5117 140 44 21 chr10 132601063 132601410 -12987878 - MER4D LTR ERV1 0 903 565 1762 183 10 0 chr10 132601410 132601711 -12987577 + AluJo SINE Alu 1 304 -8 5117 140 44 21 chr10 132601711 132602246 -12987042 - MER4D LTR ERV1 -338 565 1 2580 233 69 38 chr10 132602627 132603155 -12986133 - L1MCc LINE L1 -4891 1532 1019 3894 145 66 26 chr10 132603155 132603912 -12985376 - LTR48 LTR ERV1 0 787 1 2580 233 69 38 chr10 132603912 132604285 -12985003 - L1MCc LINE L1 -5404 1019 659 688 286 84 11 chr10 132604298 132604585 -12984703 - L1MCc LINE L1 -5814 609 302 3614 127 23 5 chr10 132604585 132605144 -12984144 - LTR24B LTR ERV1 -7 569 1 806 222 100 23 chr10 132605144 132605405 -12983883 - L1MCc LINE L1 -6118 305 25 1041 135 31 74 chr10 132606064 132606293 -12982995 - MER20 DNA MER1_type 0 219 1 2902 85 0 0 chr10 132606380 132606755 -12982533 + THE1C LTR MaLR 1 375 0 609 268 48 12 chr10 132606755 132606923 -12982365 + MER91A DNA MER1_type 13 186 -10 220 264 0 19 chr10 132606973 132607026 -12982262 - MIR3 SINE MIR -46 162 111 6861 133 11 8 chr10 132608796 132609860 -12979428 - Tigger1 DNA MER2_type 0 2418 1351 342 235 78 17 chr10 132609932 132610047 -12979241 + MLT1C LTR MaLR 49 170 -335 1411 133 48 44 chr10 132610047 132610296 -12978992 - THE1B LTR MaLR 0 364 115 1207 232 56 7 chr10 132610306 132610590 -12978698 + MLT1C LTR MaLR 169 466 -1 331 302 176 11 chr10 132610661 132610843 -12978445 + MIR SINE MIR 49 260 -2 9173 102 16 8 chr10 132612118 132613393 -12975895 - HSMAR1 DNA Mariner 0 1287 3 530 193 130 25 chr10 132613419 132613580 -12975708 + MER5A DNA MER1_type 10 187 -2 231 36 0 0 chr10 132613958 132613986 -12975302 + (CA)n Simple_repeat Simple_repeat 1 28 0 652 257 99 44 chr10 132614171 132614443 -12974845 + MER102b DNA MER1_type 35 321 -20 570 274 107 5 chr10 132614730 132614927 -12974361 + MIR SINE MIR 46 262 0 301 345 17 25 chr10 132614930 132615049 -12974239 - MIR SINE MIR -144 118 1 3526 209 120 12 chr10 132615185 132616410 -12972878 - L1MEc LINE L1 -3005 3210 1883 3117 225 55 24 chr10 132616434 132617603 -12971685 + L1ME2 LINE L1 4975 6333 -1 1173 70 6 0 chr10 132619256 132619413 -12969875 + L1PA13 LINE L1 6006 6163 0 1567 307 43 42 chr10 132619746 132620608 -12968680 + L1MEc LINE L1 29 891 -5505 322 313 178 13 chr10 132621974 132622204 -12967084 - L3 LINE CR1 -47 1530 1263 182 180 40 0 chr10 132622359 132622409 -12966879 + CT-rich Low_complexity Low_complexity 1 52 0 1265 274 62 40 chr10 132623764 132624216 -12965072 - MLT1K LTR MaLR -63 525 64 203 224 0 52 chr10 132625377 132625435 -12963853 - MIR SINE MIR -81 181 127 449 281 102 12 chr10 132626244 132626411 -12962877 - MIR SINE MIR 0 262 81 387 0 0 0 chr10 132626542 132626585 -12962703 + (TG)n Simple_repeat Simple_repeat 2 44 0 296 289 144 29 chr10 132628115 132628204 -12961084 - L2 LINE L2 -61 3252 3175 1883 163 35 77 chr10 132628204 132628609 -12960679 - MLT1B LTR MaLR 0 390 3 296 289 144 29 chr10 132628609 132628796 -12960492 - L2 LINE L2 -138 3175 2944 1679 232 122 37 chr10 132628824 132629367 -12959921 + LTR26 LTR ERV1 1 589 -14 571 226 186 5 chr10 132629432 132629631 -12959657 + L1ME1 LINE L1 5844 6078 -88 2494 76 20 8 chr10 132629636 132629990 -12959298 - MLT2A1 LTR ERVL 0 444 1 403 296 117 22 chr10 132629990 132630213 -12959075 + L1ME1 LINE L1 5921 6164 -2 263 339 52 20 chr10 132630229 132630480 -12958808 - L2 LINE L2 -621 2693 2435 204 288 34 0 chr10 132630700 132630759 -12958529 - MER5A DNA MER1_type -55 134 74 2406 156 10 5 chr10 132630930 132631328 -12957960 - MER57A LTR ERV1 -3 400 1 382 220 83 9 chr10 132632459 132632568 -12956720 - L2 LINE L2 -1 3312 3196 248 232 126 73 chr10 132632636 132632787 -12956501 + HAL1 LINE L1 19 177 -2330 509 316 25 12 chr10 132632933 132633177 -12956111 + MIR SINE MIR 14 260 -2 281 231 51 13 chr10 132634436 132634514 -12954774 + MIR3 SINE MIR 74 154 -54 554 203 237 19 chr10 132634745 132634952 -12954336 - MIR SINE MIR -1 261 10 1523 179 48 17 chr10 132635071 132635362 -12953926 - AluJo SINE Alu -10 302 3 2072 182 3 11 chr10 132636300 132636668 -12952620 + MLT1A1 LTR MaLR 1 365 0 464 139 13 0 chr10 132636760 132636839 -12952449 + MADE1 DNA Mariner 1 80 0 289 286 164 7 chr10 132636846 132636986 -12952302 - MIR SINE MIR -67 195 34 2354 74 44 3 chr10 132637327 132637624 -12951664 + AluY SINE Alu 3 311 0 343 176 15 0 chr10 132637630 132637698 -12951590 + MER103 DNA DNA 51 119 -47 211 102 0 61 chr10 132638195 132638244 -12951044 + (TTTTG)n Simple_repeat Simple_repeat 1 46 0 529 267 76 61 chr10 132639492 132639754 -12949534 + MLT1L LTR MaLR 193 458 -157 2050 78 0 4 chr10 132639950 132640205 -12949083 + AluY SINE Alu 1 254 -57 29 0 0 0 chr10 132640793 132640822 -12948466 + AT_rich Low_complexity Low_complexity 1 29 0 2181 113 3 7 chr10 132641495 132641796 -12947492 + AluSx SINE Alu 1 300 -12 2134 117 6 19 chr10 132643484 132643800 -12945488 - AluSx SINE Alu 0 312 1 233 293 73 52 chr10 132645364 132645555 -12943733 + L2 LINE L2 2839 3033 -239 1738 137 3 44 chr10 132646149 132646442 -12942846 + AluSx SINE Alu 30 310 -2 258 260 87 0 chr10 132646891 132646995 -12942293 + MIR SINE MIR 93 205 -57 370 293 31 118 chr10 132648066 132648489 -12940799 - L2 LINE L2 -3 3269 2884 1434 149 64 0 chr10 132648849 132649130 -12940158 + L1MB7 LINE L1 5886 6184 0 408 88 0 0 chr10 132649744 132649801 -12939487 + (GGGA)n Simple_repeat Simple_repeat 4 60 0 1672 188 3 25 chr10 132699977 132700296 -12888992 - AluJb SINE Alu 0 312 1 456 141 0 11 chr10 132700507 132700599 -12888689 - AluSp/q SINE Alu -3 310 220 535 139 0 0 chr10 132701561 132701640 -12887648 - AluS SINE Alu -233 80 2 1414 128 10 5 chr10 132701863 132702067 -12887221 + AluSg/x SINE Alu 83 287 -23 396 98 16 0 chr10 132702283 132702344 -12886944 - L1MD1 LINE L1 -8 6234 6173 1632 131 21 25 chr10 132702344 132702626 -12886662 + AluSx SINE Alu 1 281 -31 201 324 9 9 chr10 132702641 132702746 -12886542 + CT-rich Low_complexity Low_complexity 5 109 0 740 161 103 203 chr10 132703170 132703404 -12885884 - AluJo SINE Alu 0 319 125 1935 162 7 3 chr10 132703404 132703713 -12885575 + AluJb SINE Alu 1 310 -2 740 161 103 203 chr10 132703713 132703824 -12885464 - AluJo SINE Alu -194 125 5 584 303 73 28 chr10 132704101 132704418 -12884870 - L1MEc LINE L1 -6031 365 35 21 0 0 0 chr10 132706070 132706091 -12883197 + AT_rich Low_complexity Low_complexity 1 21 0 1499 186 81 3 chr10 132706098 132706383 -12882905 + AluJo SINE Alu 6 312 0 726 192 0 0 chr10 132706443 132706568 -12882720 + FLAM_C SINE Alu 1 125 -8 1188 176 46 0 chr10 132706838 132707100 -12882188 + AluSg SINE Alu 1 274 -36 1778 168 0 7 chr10 132707718 132708015 -12881273 + AluJb SINE Alu 1 295 -17 195 204 0 0 chr10 132708016 132708060 -12881228 + (TATATG)n Simple_repeat Simple_repeat 3 46 0 561 252 80 73 chr10 132708553 132708861 -12880427 + L1M4 LINE L1 4202 4517 -1629 2052 142 0 19 chr10 132708861 132709172 -12880116 + AluJb SINE Alu 1 305 -7 561 252 80 73 chr10 132709172 132709410 -12879878 + L1M4 LINE L1 4517 4752 -1394 28 0 0 0 chr10 132709438 132709466 -12879822 + AT_rich Low_complexity Low_complexity 1 28 0 2264 82 0 4 chr10 132709975 132710256 -12879032 - AluY SINE Alu -31 280 1 1515 203 58 21 chr10 132710257 132710619 -12878669 - L1MD2 LINE L1 -167 6011 5756 191 330 52 17 chr10 132710621 132710736 -12878552 + L2 LINE L2 3191 3309 -4 1365 199 130 49 chr10 132711371 132711779 -12877509 - MLT1D LTR MaLR 0 505 65 2007 129 6 22 chr10 132712077 132712388 -12876900 - AluSx SINE Alu 0 312 7 198 0 0 0 chr10 132714462 132714484 -12874804 + (T)n Simple_repeat Simple_repeat 1 22 0 267 133 0 0 chr10 132714679 132714724 -12874564 - L2 LINE L2 0 3313 3269 405 0 0 0 chr10 132715289 132715334 -12873954 + (CAAAA)n Simple_repeat Simple_repeat 2 46 0 1981 122 16 7 chr10 132715536 132715840 -12873448 - AluSx SINE Alu -5 307 1 198 0 0 0 chr10 132715888 132715910 -12873378 + (TTTTTA)n Simple_repeat Simple_repeat 2 23 0 5892 19 0 2 chr10 132715920 132716544 -12872744 - SVA Other Other -8 1378 756 2381 37 40 24 chr10 132717301 132717599 -12871689 + AluY SINE Alu 1 303 -8 275 270 112 45 chr10 132717620 132717798 -12871490 - L2 LINE L2 0 3313 3124 1491 166 31 110 chr10 132717873 132718264 -12871024 + L1MD3 LINE L1 7629 7988 -7 386 279 126 38 chr10 132718955 132719046 -12870242 + L2 LINE L2 2200 2282 -1032 3971 117 30 12 chr10 132719046 132719638 -12869650 + LTR26 LTR ERV1 1 603 0 386 279 126 38 chr10 132719638 132719808 -12869480 + L2 LINE L2 2282 2484 -830 461 287 115 61 chr10 132720177 132720589 -12868699 - L1M4 LINE L1 -743 5403 5015 2010 143 0 3 chr10 132720589 132720890 -12868398 - AluSx SINE Alu -4 308 9 461 287 115 61 chr10 132720890 132721425 -12867863 - L1M4 LINE L1 -1131 5015 4405 969 111 0 0 chr10 132721762 132721888 -12867400 + AluSg/x SINE Alu 167 292 -20 1741 169 7 7 chr10 132721935 132722214 -12867074 + AluJo SINE Alu 9 287 -25 467 104 0 15 chr10 132722826 132722893 -12866395 + MER20 DNA MER1_type 3 68 -151 291 255 106 71 chr10 132723745 132723886 -12865402 + MIR SINE MIR 117 262 0 1398 99 0 42 chr10 132724912 132725127 -12864161 - AluSq SINE Alu 0 306 100 202 238 38 50 chr10 132725254 132725414 -12863874 + G-rich Low_complexity Low_complexity 3 160 0 21 0 0 0 chr10 132725414 132725435 -12863853 + GC_rich Low_complexity Low_complexity 1 21 0 205 181 0 42 chr10 132725446 132725518 -12863770 + G-rich Low_complexity Low_complexity 1 69 0 40 89 0 0 chr10 132725523 132725602 -12863686 + GC_rich Low_complexity Low_complexity 1 79 0 272 257 0 0 chr10 132725627 132725701 -12863587 + G-rich Low_complexity Low_complexity 1 74 0 739 224 5 0 chr10 132725723 132725933 -12863355 + AluSg/x SINE Alu 85 295 -17 721 221 39 7 chr10 132725933 132726087 -12863201 + MER58B DNA MER1_type 181 339 -2 2022 149 34 60 chr10 132726240 132726491 -12862797 + L1MA4 LINE L1 5896 6133 -167 2354 105 0 0 chr10 132726491 132726797 -12862491 + AluSx SINE Alu 5 310 -2 2022 149 34 60 chr10 132726797 132726961 -12862327 + L1MA4 LINE L1 6133 6300 0 1003 163 0 0 chr10 132726995 132727148 -12862140 + AluJo SINE Alu 1 153 -159 1949 170 3 0 chr10 132727653 132727959 -12861329 + AluJb SINE Alu 1 307 -5 817 145 0 15 chr10 132728002 132728133 -12861155 + FLAM_C SINE Alu 1 129 -4 21 36 0 0 chr10 132728133 132728161 -12861127 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr10 132728364 132728399 -12860889 + AT_rich Low_complexity Low_complexity 1 35 0 1849 142 7 17 chr10 132728443 132728745 -12860543 + AluJo SINE Alu 1 299 -13 234 282 162 26 chr10 132728968 132729085 -12860203 - MIR SINE MIR -27 235 103 962 236 39 0 chr10 132729225 132729433 -12859855 + MER58A DNA MER1_type 9 224 0 1718 168 39 0 chr10 132729527 132729813 -12859475 - AluJo SINE Alu -15 297 1 1198 183 88 21 chr10 132729827 132730067 -12859221 - AluJb SINE Alu -20 292 37 1988 179 88 26 chr10 132730624 132731065 -12858223 - MLT1C LTR MaLR -1 459 1 1007 201 20 0 chr10 132731256 132731455 -12857833 + MER2 DNA MER2_type 2 204 -141 2169 125 0 3 chr10 132731456 132731759 -12857529 - AluSx SINE Alu -10 302 1 359 191 44 15 chr10 132731781 132731849 -12857439 + MER2 DNA MER2_type 273 342 -3 1135 157 0 20 chr10 132732121 132732318 -12856970 - AluSg/x SINE Alu -19 291 99 1006 146 0 0 chr10 132732552 132732726 -12856562 + AluSg/x SINE Alu 138 311 0 2427 74 3 0 chr10 132733176 132733473 -12855815 - AluY SINE Alu -13 298 1 4127 169 43 35 chr10 132735137 132736005 -12853283 - L1MB7 LINE L1 -10 6174 5300 532 217 72 36 chr10 132736083 132736249 -12853039 + MER96B DNA MER1_type? 242 413 -4 201 94 0 0 chr10 132737089 132737121 -12852167 + (CGGA)n Simple_repeat Simple_repeat 3 34 0 225 0 0 0 chr10 132737527 132737552 -12851736 + (T)n Simple_repeat Simple_repeat 1 25 0 219 69 0 0 chr10 132739646 132739675 -12849613 + (TG)n Simple_repeat Simple_repeat 1 29 0 702 250 39 19 chr10 132740428 132740684 -12848604 - AluSp SINE Alu -52 261 1 21 0 0 0 chr10 132740684 132740705 -12848583 + AT_rich Low_complexity Low_complexity 1 21 0 1710 165 6 40 chr10 132740734 132741056 -12848232 - AluJo SINE Alu -1 311 1 254 200 92 0 chr10 132741509 132741574 -12847714 - HsTC2 DNA Tc2 -3 1895 1825 331 264 35 56 chr10 132741769 132741913 -12847375 + L1MEd LINE L1 500 640 -5479 844 108 108 0 chr10 132741937 132742057 -12847231 - FLAM_C SINE Alu -5 138 6 2279 114 0 0 chr10 132742432 132742739 -12846549 - AluSx SINE Alu -4 308 2 2187 72 43 0 chr10 132742909 132743219 -12846069 + AluY SINE Alu 1 311 0 557 261 79 75 chr10 132743238 132743519 -12845769 + L1ME4a LINE L1 5315 5600 -521 2012 98 66 11 chr10 132743519 132743805 -12845483 - AluSx SINE Alu -10 302 1 557 261 79 75 chr10 132743805 132744032 -12845256 + L1ME4a LINE L1 5600 5825 -296 464 209 119 15 chr10 132744033 132744167 -12845121 + L1MC4a LINE L1 5697 5844 -1964 404 267 168 72 chr10 132744175 132744508 -12844780 + L2 LINE L2 2949 3313 0 228 182 0 0 chr10 132744508 132744552 -12844736 + (TGGA)n Simple_repeat Simple_repeat 2 45 0 2267 121 0 0 chr10 132744606 132744904 -12844384 - AluSx SINE Alu -14 298 1 1310 93 0 0 chr10 132745066 132745228 -12844060 - AluSq SINE Alu -151 162 1 251 239 38 5 chr10 132745945 132746039 -12843249 + MLT1J LTR MaLR 427 509 -2 1470 68 0 47 chr10 132747905 132748096 -12841192 - AluY SINE Alu -129 182 1 1001 93 60 13 chr10 132748096 132748247 -12841041 + MSTB LTR MaLR 269 426 0 1823 149 55 0 chr10 132748303 132748424 -12840864 + AluJb SINE Alu 1 114 -198 192 77 0 0 chr10 132748424 132748450 -12840838 + (TAAAA)n Simple_repeat Simple_repeat 3 28 0 1823 149 55 0 chr10 132748450 132748603 -12840685 + AluJb SINE Alu 114 290 -22 2272 114 10 0 chr10 132748619 132748918 -12840370 + AluSx SINE Alu 1 302 -10 1031 184 69 28 chr10 132749020 132749238 -12840050 - AluJb SINE Alu -1 311 85 957 185 36 17 chr10 132749530 132749767 -12839521 + MER33 DNA MER1_type 1 233 -91 408 94 0 0 chr10 132749770 132749823 -12839465 + Alu SINE Alu 2 54 -258 1405 117 0 19 chr10 132749823 132750028 -12839260 + AluSg/x SINE Alu 99 299 -11 324 217 12 0 chr10 132750028 132750111 -12839177 + MER33 DNA MER1_type 267 350 -13 353 119 0 178 chr10 132750114 132750155 -12839133 + MER89 LTR ERV1 5 19 -540 1833 153 39 0 chr10 132750155 132750437 -12838851 - AluJb SINE Alu -18 294 2 353 119 0 178 chr10 132750437 132750496 -12838792 + MER89 LTR ERV1 19 87 -472 303 235 37 12 chr10 132750471 132750552 -12838736 + MER89 LTR ERV1 197 279 -280 * 341 296 0 11 chr10 132750543 132750631 -12838657 + MER92C LTR ERV1 30 116 -438 377 157 14 0 chr10 132750731 132750801 -12838487 + MER92C LTR ERV1 484 554 0 711 191 23 0 chr10 132751064 132751195 -12838093 + FLAM_C SINE Alu 2 135 -8 325 233 0 0 chr10 132751229 132751289 -12837999 - MLT1J LTR MaLR -348 163 104 429 333 45 20 chr10 132751421 132751622 -12837666 + HAL1 LINE L1 1779 1984 -523 399 268 49 8 chr10 132751627 132751750 -12837538 - L2 LINE L2 -2 3311 3184 903 226 39 69 chr10 132751817 132752224 -12837064 - HAL1 LINE L1 -112 2395 2001 1352 173 43 151 chr10 132752309 132752376 -12836912 - MSTD LTR MaLR 0 396 323 2318 84 3 0 chr10 132752376 132752663 -12836625 + AluSp SINE Alu 1 288 -25 1352 173 43 151 chr10 132752663 132753039 -12836249 - MSTD LTR MaLR -73 323 1 245 271 29 0 chr10 132753132 132753202 -12836086 + L2 LINE L2 3184 3255 -58 1933 120 0 25 chr10 132753221 132753537 -12835751 - AluY SINE Alu -3 308 1 977 180 0 0 chr10 132753719 132753880 -12835408 - FRAM SINE Alu -5 161 1 968 201 114 63 chr10 132754064 132754554 -12834734 + MER39 LTR ERV1 2 707 0 1354 200 143 0 chr10 132754872 132754982 -12834306 + MER34B LTR ERV1 36 127 -438 2155 113 29 63 chr10 132754982 132755279 -12834009 + MER47A DNA MER2_type 1 284 -2039 2303 89 0 0 chr10 132755279 132755570 -12833718 - AluSc SINE Alu -18 291 1 2155 113 29 63 chr10 132755570 132755651 -12833637 + MER47A DNA MER2_type 284 366 0 1354 200 143 0 chr10 132755651 132756103 -12833185 + MER34B LTR ERV1 127 565 0 283 128 43 0 chr10 132756296 132756343 -12832945 - MER57A LTR ERV1 -67 336 288 237 119 0 51 chr10 132756987 132757046 -12832242 + (TTCC)n Simple_repeat Simple_repeat 1 56 0 1578 182 34 17 chr10 132757046 132757343 -12831945 - AluJo SINE Alu -6 306 5 635 254 124 50 chr10 132757991 132758206 -12831082 - L2 LINE L2 0 3313 3115 1928 159 24 0 chr10 132758206 132758501 -12830787 + AluJo SINE Alu 1 302 -10 635 254 124 50 chr10 132758501 132758891 -12830397 - L2 LINE L2 -198 3115 2658 1184 210 111 58 chr10 132758891 132759287 -12830001 - LTR16A LTR ERVL 0 450 34 614 244 41 0 chr10 132759321 132759518 -12829770 - L2 LINE L2 -656 2658 2454 1852 140 3 14 chr10 132759784 132760070 -12829218 + AluJo SINE Alu 4 286 -26 239 348 58 7 chr10 132760344 132760482 -12828806 - MIR SINE MIR -45 217 73 517 237 124 10 chr10 132760737 132760931 -12828357 + MIR SINE MIR 47 262 0 2098 99 3 77 chr10 132761074 132761398 -12827890 + AluSx SINE Alu 1 300 -12 203 231 0 0 chr10 132761465 132761504 -12827784 + GA-rich Low_complexity Low_complexity 3 41 0 2453 52 16 10 chr10 132762184 132762493 -12826795 + AluY SINE Alu 1 311 0 2113 130 0 3 chr10 132762681 132762980 -12826308 - AluSx SINE Alu -14 298 1 306 268 98 0 chr10 132763376 132763499 -12825789 + MIR SINE MIR 114 248 -14 364 123 6 18 chr10 132763720 132763787 -12825501 - L1M3 LINE L1 -472 5696 5628 898 212 78 16 chr10 132764260 132764515 -12824773 + L1MC4a LINE L1 5693 5963 -1845 497 309 52 60 chr10 132765544 132765838 -12823450 + L1M4 LINE L1 2236 2531 -3615 872 126 0 30 chr10 132765838 132765973 -12823315 + FLAM_C SINE Alu 1 131 -2 497 309 52 60 chr10 132765973 132766314 -12822974 + L1M4 LINE L1 2531 2873 -3273 1781 239 89 40 chr10 132766314 132766911 -12822377 + MLT1E2 LTR MaLR 1 626 0 497 309 52 60 chr10 132766911 132766996 -12822292 + L1M4 LINE L1 2873 2957 -3189 1811 224 117 29 chr10 132766996 132767150 -12822138 - MLT1E LTR MaLR 0 593 454 2048 148 0 0 chr10 132767150 132767448 -12821840 - AluJb SINE Alu -14 298 1 1811 224 117 29 chr10 132767448 132767838 -12821450 - MLT1E LTR MaLR -139 454 1 497 309 52 60 chr10 132767838 132768068 -12821220 + L1M4 LINE L1 2957 3160 -2986 584 212 15 7 chr10 132768264 132768401 -12820887 + MLT1J LTR MaLR 374 511 0 192 77 0 0 chr10 132768955 132768981 -12820307 + (GGGA)n Simple_repeat Simple_repeat 4 29 0 514 322 91 21 chr10 132769412 132769654 -12819634 - MIR SINE MIR 0 262 4 652 317 103 47 chr10 132769981 132770513 -12818775 - L1ME LINE L1 -4842 1584 831 295 266 70 26 chr10 132770903 132771079 -12818209 - L1ME LINE L1 -5886 530 348 2667 60 11 6 chr10 132772214 132772567 -12816721 - THE1C LTR MaLR 0 375 21 282 70 242 0 chr10 132772595 132772653 -12816635 - THE1C LTR MaLR -293 71 1 216 403 16 8 chr10 132772991 132773120 -12816168 + MIR SINE MIR 18 147 -61 784 92 33 0 chr10 132773125 132773245 -12816043 + L1MA8 LINE L1 6165 6288 -3 1608 159 59 7 chr10 132773392 132773681 -12815607 - AluJo SINE Alu -8 304 1 2326 71 14 0 chr10 132773903 132774197 -12815091 + AluY SINE Alu 1 298 -13 706 167 53 0 chr10 132774197 132774311 -12814977 - AluJo/FLAM SINE Alu -192 120 1 306 306 35 0 chr10 132774491 132774576 -12814712 + MIR SINE MIR 56 143 -65 182 365 0 0 chr10 132774656 132774708 -12814580 + MIR SINE MIR 28 79 -129 2519 77 0 3 chr10 132775186 132775496 -12813792 - AluSx SINE Alu -3 309 1 378 315 134 13 chr10 132775522 132775820 -12813468 - L1ME LINE L1 -476 5645 5312 1004 106 0 0 chr10 132776627 132776759 -12812529 + AluSq/x SINE Alu 1 132 -181 1388 148 148 4 chr10 132776762 132777005 -12812283 - AluJo SINE Alu -34 278 1 282 318 47 0 chr10 132777209 132777294 -12811994 + MIR SINE MIR 64 152 -110 1894 93 70 103 chr10 132777928 132778316 -12810972 - THE1C LTR MaLR 0 375 1 249 258 0 0 chr10 132778329 132778391 -12810897 + L1MC5 LINE L1 7843 7904 -57 1423 122 10 5 chr10 132778760 132778965 -12810323 - AluSg/x SINE Alu -1 309 104 252 226 0 0 chr10 132780004 132780066 -12809222 + (TA)n Simple_repeat Simple_repeat 2 63 0 362 261 136 43 chr10 132780337 132780521 -12808767 + MIR3 SINE MIR 8 208 0 2379 90 0 0 chr10 132781892 132782191 -12807097 + AluY SINE Alu 1 299 -12 1782 158 0 14 chr10 132782382 132782674 -12806614 + AluJb SINE Alu 1 288 -24 1873 158 3 0 chr10 132782931 132783216 -12806072 - AluSx SINE Alu -26 286 1 279 0 0 0 chr10 132784136 132784167 -12805121 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 401 191 11 45 chr10 132784169 132784258 -12805030 - FLAM_C SINE Alu -30 113 28 2286 107 0 0 chr10 132784533 132784832 -12804456 - AluSq SINE Alu -14 299 1 990 278 89 16 chr10 132785440 132785950 -12803338 + L1MC/D LINE L1 5274 5811 -467 277 250 59 0 chr10 132786702 132786770 -12802518 + MER81 DNA DNA 1 72 -42 525 160 0 10 chr10 132786875 132786975 -12802313 - FLAM_A SINE Alu -6 136 38 339 248 124 9 chr10 132786978 132787091 -12802197 + MIR SINE MIR 92 217 -45 23 54 0 0 chr10 132787253 132787290 -12801998 + AT_rich Low_complexity Low_complexity 1 37 0 193 167 167 0 chr10 132788348 132788396 -12800892 - MIR SINE MIR -50 212 157 2299 98 0 0 chr10 132789092 132789387 -12799901 - AluSx SINE Alu -17 295 1 2121 80 39 11 chr10 132789965 132790251 -12799037 - AluSx SINE Alu -18 294 1 1898 146 4 0 chr10 132790328 132790609 -12798679 - AluJo SINE Alu -24 288 7 758 196 35 133 chr10 132790609 132790925 -12798363 - L1ME2 LINE L1 -32 6132 5848 1823 153 7 3 chr10 132791092 132791380 -12797908 - AluJo SINE Alu -23 289 1 1599 195 6 41 chr10 132792418 132792736 -12796552 - AluJo SINE Alu -5 307 1 285 285 108 75 chr10 132792745 132792830 -12796458 - L1ME2 LINE L1 -301 5820 5739 1606 194 61 55 chr10 132792830 132793289 -12795999 - MLT1C LTR MaLR -1 466 5 285 285 108 75 chr10 132793289 132793536 -12795752 - L1ME2 LINE L1 -382 5739 5477 420 271 156 17 chr10 132793610 132793946 -12795342 - L1ME2 LINE L1 -648 5518 5151 327 355 0 16 chr10 132793996 132794117 -12795171 + MIR3 SINE MIR 3 121 -87 186 367 56 0 chr10 132794151 132794241 -12795047 - L2 LINE L2 -6 3266 3172 882 234 44 44 chr10 132794403 132794651 -12794637 - MIR SINE MIR 0 262 15 2307 97 0 3 chr10 132794774 132795072 -12794216 - AluY SINE Alu -14 297 1 775 196 0 0 chr10 132795354 132795487 -12793801 - FLAM_C SINE Alu 0 133 1 629 102 71 0 chr10 132796732 132796830 -12792458 + AluSc SINE Alu 195 299 -10 807 174 0 21 chr10 132796893 132797037 -12792251 - FLAM_C SINE Alu -2 141 1 871 133 0 15 chr10 132799436 132799571 -12789717 - FLAM_A SINE Alu 0 133 1 324 250 0 18 chr10 132800050 132800162 -12789126 + L1ME LINE L1 4488 4597 -1549 310 303 84 0 chr10 132800256 132800375 -12788913 + L1ME LINE L1 5523 5651 -519 377 192 50 0 chr10 132800378 132800477 -12788811 + L1MC4a LINE L1 4969 5072 -1074 43 64 0 0 chr10 132800655 132800733 -12788555 + AT_rich Low_complexity Low_complexity 1 78 0 355 248 41 41 chr10 132800759 132800904 -12788384 + L1MC4a LINE L1 5127 5271 -875 2161 110 13 19 chr10 132800916 132801224 -12788064 + AluSg SINE Alu 2 307 -3 371 225 100 0 chr10 132801269 132801389 -12787899 + L1MC4a LINE L1 5350 5481 -689 1403 163 9 0 chr10 132801395 132801610 -12787678 + AluSg/x SINE Alu 85 301 -9 229 204 0 0 chr10 132801618 132801662 -12787626 + L1MC4a LINE L1 5486 5529 -637 392 308 128 30 chr10 132801690 132801924 -12787364 + L1MC4a LINE L1 5664 5920 -1888 1142 181 0 15 chr10 132802206 132802411 -12786877 + AluJb SINE Alu 109 310 -2 823 205 78 96 chr10 132802660 132803045 -12786243 + MLT1L LTR MaLR 147 524 -91 532 275 78 113 chr10 132803155 132803733 -12785555 - L1MC/D LINE L1 -1987 5821 5264 506 282 87 39 chr10 132804091 132804584 -12784704 - L1MC/D LINE L1 -1310 4836 4320 2004 107 7 23 chr10 132805369 132805668 -12783620 - AluSx SINE Alu -18 294 1 304 278 179 31 chr10 132806718 132806880 -12782408 + MIR SINE MIR 47 232 -30 22 70 0 0 chr10 132806957 132807000 -12782288 + AT_rich Low_complexity Low_complexity 1 43 0 284 102 0 0 chr10 132807449 132807498 -12781790 - Alu SINE Alu -2 298 250 283 216 186 0 chr10 132807533 132807630 -12781658 - LTR50 LTR ERVL -594 201 87 1940 124 22 32 chr10 132807630 132807944 -12781344 + AluSx SINE Alu 1 311 -1 591 293 19 28 chr10 132808013 132808225 -12781063 + MIR SINE MIR 37 246 -16 305 212 15 0 chr10 132808934 132809000 -12780288 - Charlie8 DNA MER1_type -2244 173 107 739 219 107 15 chr10 132809074 132809270 -12780018 + MIR SINE MIR 49 262 0 2259 101 3 13 chr10 132809583 132809889 -12779399 + AluSx SINE Alu 1 303 -9 994 180 150 10 chr10 132812037 132812331 -12776957 - L1M4 LINE L1 -801 5345 5011 396 130 74 65 chr10 132812732 132812840 -12776448 + MER96B DNA MER1_type? 17 125 -292 204 67 0 0 chr10 132813443 132813473 -12775815 + (TAAAA)n Simple_repeat Simple_repeat 2 31 0 262 269 66 30 chr10 132813509 132813676 -12775612 + L1MEc LINE L1 1809 1981 -4415 969 210 75 45 chr10 132813681 132813879 -12775409 + L1MEc LINE L1 2960 3151 -3064 2128 95 3 20 chr10 132813879 132814173 -12775115 + AluSg SINE Alu 1 289 -21 969 210 75 45 chr10 132814173 132814448 -12774840 + L1MEc LINE L1 3151 3416 -2799 2107 97 4 0 chr10 132814448 132814717 -12774571 + AluSc SINE Alu 17 286 -23 194 0 39 0 chr10 132814720 132814746 -12774542 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 969 210 75 45 chr10 132814746 132814787 -12774501 + L1MEc LINE L1 3417 3586 -2629 769 249 143 18 chr10 132814792 132815178 -12774110 + L1ME2 LINE L1 5721 6154 -10 1766 149 11 0 chr10 132815341 132815610 -12773678 + AluJb SINE Alu 34 305 -7 252 0 0 0 chr10 132817764 132817792 -12771496 + (CA)n Simple_repeat Simple_repeat 2 29 0 1229 224 177 53 chr10 132818804 132819466 -12769822 - L1MC4 LINE L1 -2 8040 7297 182 154 103 0 chr10 132819763 132819802 -12769486 - MER5B DNA MER1_type -134 44 2 1026 185 11 26 chr10 132819809 132819998 -12769290 + MER5A DNA MER1_type 4 189 0 1444 143 0 42 chr10 132820229 132820488 -12768800 - AluJo SINE Alu -19 293 46 2163 107 0 4 chr10 132820511 132820792 -12768496 + AluSx SINE Alu 1 280 -32 456 253 95 38 chr10 132820843 132821001 -12768287 + MER68 LTR ERV1 396 562 0 1920 214 83 34 chr10 132821005 132821927 -12767361 - L1ME1 LINE L1 -332 5834 4857 2451 66 10 0 chr10 132821936 132822240 -12767048 + AluSx SINE Alu 1 307 -5 435 163 62 0 chr10 132822251 132822331 -12766957 + L1MB4 LINE L1 5844 5928 -252 * 1257 203 86 84 chr10 132822316 132822348 -12766940 - L1ME1 LINE L1 -2702 3444 3414 1769 175 97 56 chr10 132822348 132822833 -12766455 + MLT1D LTR MaLR 1 505 0 1257 203 86 84 chr10 132822833 132823372 -12765916 - L1ME1 LINE L1 -2732 3414 2872 1417 220 65 25 chr10 132823384 132823752 -12765536 - L1ME1 LINE L1 -3384 2762 2380 1550 127 5 0 chr10 132823782 132823994 -12765294 + AluSx SINE Alu 1 213 -99 2944 168 34 31 chr10 132823994 132824266 -12765022 + L1MB7 LINE L1 5550 5820 -364 1630 165 0 54 chr10 132824266 132824581 -12764707 + AluJo SINE Alu 1 298 -14 2944 168 34 31 chr10 132824581 132824817 -12764471 + L1MB7 LINE L1 5820 6063 -121 2316 107 0 0 chr10 132824817 132825115 -12764173 + AluSx SINE Alu 1 298 -14 2944 168 34 31 chr10 132825115 132825218 -12764070 + L1MB7 LINE L1 6063 6164 -20 1505 114 5 5 chr10 132825236 132825447 -12763841 + AluSg/x SINE Alu 83 293 -19 2269 93 0 7 chr10 132825484 132825794 -12763494 + AluSg SINE Alu 1 308 -2 435 284 65 35 chr10 132826307 132826476 -12762812 + MER97c DNA MER1_type? 1 174 -916 2014 141 0 3 chr10 132826615 132826919 -12762369 + AluSx SINE Alu 1 303 -9 419 297 168 51 chr10 132826989 132827629 -12761659 - L2 LINE L2 -5 3267 2561 2096 108 42 20 chr10 132827637 132827765 -12761523 + AluSq SINE Alu 1 125 -188 2214 122 0 0 chr10 132827765 132828060 -12761228 + AluSg SINE Alu 1 295 -15 2096 108 42 20 chr10 132828060 132828237 -12761051 + AluSq SINE Alu 125 313 0 966 168 95 0 chr10 132828352 132828542 -12760746 + MER3 DNA MER1_type 1 208 -1 2325 66 7 3 chr10 132828643 132828932 -12760356 + AluSc SINE Alu 2 291 -18 351 332 145 19 chr10 132830662 132830987 -12758301 + L1M2 LINE L1 555 920 -5929 27 29 0 0 chr10 132831102 132831136 -12758152 + GC_rich Low_complexity Low_complexity 1 34 0 232 169 26 26 chr10 132831370 132831447 -12757841 + (CGCGG)n Simple_repeat Simple_repeat 5 81 0 600 150 150 8 chr10 132831592 132831712 -12757576 - AluYb8 SINE Alu -159 159 23 1024 149 46 52 chr10 132831712 132831906 -12757382 - MSTB LTR MaLR -230 196 4 270 311 56 0 chr10 132832435 132832525 -12756763 + MLT1J LTR MaLR 103 197 -314 437 178 0 0 chr10 132832745 132832818 -12756470 + MER67D LTR ERV1 87 159 -355 1471 93 5 0 chr10 132832819 132833013 -12756275 + LTR12 LTR ERV1 80 274 -440 342 263 10 0 chr10 132833017 132833116 -12756172 + LTR30 LTR ERV1 544 643 -79 28761 104 22 11 chr10 132833116 132838013 -12751275 + Harlequin LTR ERV1 1 4944 -2001 2225 180 112 54 chr10 132838025 132838794 -12750494 + Harlequin LTR ERV1 843 1720 -5176 * 4688 102 5 0 chr10 132838789 132839429 -12749859 + Harlequin LTR ERV1 7757 8399 0 275 231 0 0 chr10 132839429 132839481 -12749807 + LTR30 LTR ERV1 1 52 -670 1439 97 14 142 chr10 132839481 132839796 -12749492 + LTR12 LTR ERV1 57 2032 -406 315 239 34 0 chr10 132839797 132839885 -12749403 + LTR30 LTR ERV1 553 643 -79 746 90 0 0 chr10 132839887 132839987 -12749301 + LTR12 LTR ERV1 615 714 0 318 214 198 43 chr10 132839989 132840176 -12749112 + MER67C LTR ERV1 188 403 -307 * 413 249 31 6 chr10 132840145 132840360 -12748928 + MER67D LTR ERV1 273 528 -15 1446 141 102 14 chr10 132840661 132840944 -12748344 - AluJb SINE Alu -2 310 3 2136 99 10 19 chr10 132840972 132841286 -12748002 + AluY SINE Alu 1 311 0 2291 81 0 0 chr10 132842643 132842926 -12746362 - AluSx SINE Alu -8 304 22 604 212 201 0 chr10 132843095 132843284 -12746004 + MIR SINE MIR 8 234 -28 581 269 96 30 chr10 132843520 132843717 -12745571 + L2 LINE L2 3103 3312 -1 345 24 0 0 chr10 132844020 132844062 -12745226 + (TG)n Simple_repeat Simple_repeat 1 42 0 2065 104 28 7 chr10 132844227 132844514 -12744774 + AluSx SINE Alu 1 293 -19 284 217 121 12 chr10 132844515 132844598 -12744690 - L2 LINE L2 -14 3299 3208 264 314 51 34 chr10 132845315 132845433 -12743855 + L2 LINE L2 3190 3309 -4 398 306 60 54 chr10 132845441 132845755 -12743533 - L2 LINE L2 -814 2500 2185 2359 89 0 22 chr10 132846841 132847157 -12742131 + AluSx SINE Alu 1 309 -3 246 205 68 87 chr10 132847207 132847368 -12741920 + L1ME4a LINE L1 5927 6084 -37 393 232 48 82 chr10 132848920 132849073 -12740215 - L1MD3 LINE L1 0 8029 7881 190 232 12 24 chr10 132849089 132849171 -12740117 + C-rich Low_complexity Low_complexity 2 82 0 432 294 29 12 chr10 132849180 132849350 -12739938 - L1MC4 LINE L1 -119 7923 7751 303 203 0 0 chr10 132849373 132849437 -12739851 + (TATATG)n Simple_repeat Simple_repeat 3 66 0 1682 178 0 11 chr10 132849440 132849716 -12739572 - AluJo SINE Alu -19 293 21 972 150 0 13 chr10 132849727 132849880 -12739408 - FRAM SINE Alu -23 153 3 22 0 0 0 chr10 132849895 132849917 -12739371 + AT_rich Low_complexity Low_complexity 1 22 0 1350 183 75 34 chr10 132850131 132850426 -12738862 - AluJo SINE Alu 0 312 6 21 57 0 0 chr10 132850439 132850474 -12738814 + AT_rich Low_complexity Low_complexity 1 35 0 368 105 0 195 chr10 132850639 132850757 -12738531 - L1ME1 LINE L1 0 6178 6077 349 274 52 22 chr10 132850755 132850804 -12738484 - L1ME LINE L1 -388 5733 5687 * 2246 108 13 0 chr10 132850804 132851109 -12738179 - AluSx SINE Alu -1 311 3 349 274 52 22 chr10 132851109 132851194 -12738094 - L1ME LINE L1 -434 5687 5595 1931 122 39 0 chr10 132851199 132851485 -12737803 + AluSp SINE Alu 1 297 -16 965 71 21 43 chr10 132851605 132851746 -12737542 - L1MA3 LINE L1 0 6305 6168 350 244 47 8 chr10 132852486 132852613 -12736675 - MER103 DNA DNA -1 165 34 1885 134 17 7 chr10 132852850 132853141 -12736147 - AluSx SINE Alu -17 295 2 212 212 15 0 chr10 132853676 132853742 -12735546 + CT-rich Low_complexity Low_complexity 2 68 0 2233 71 9 68 chr10 132853861 132854184 -12735104 - AluSp SINE Alu -9 304 1 209 356 0 0 chr10 132855497 132855556 -12733732 + L2 LINE L2 3171 3229 -43 2400 247 62 16 chr10 132856073 132856809 -12732479 - L1MC4a LINE L1 -5 7803 7034 264 222 303 0 chr10 132856970 132857069 -12732219 + MIR SINE MIR 16 144 -118 854 214 158 21 chr10 132858183 132858468 -12730820 + MER33 DNA MER1_type 1 324 0 1344 136 189 8 chr10 132860603 132860846 -12728442 + AluJb SINE Alu 1 287 -25 24 91 0 0 chr10 132863196 132863262 -12726026 + AT_rich Low_complexity Low_complexity 1 66 0 3046 216 107 59 chr10 132864350 132865353 -12723935 + L1M4 LINE L1 2 1052 -5490 1206 164 40 132 chr10 132865355 132865659 -12723629 + AluJo SINE Alu 1 276 -36 3100 235 92 48 chr10 132865672 132866529 -12722759 + L1M4 LINE L1 1042 1860 -4965 1798 148 0 63 chr10 132866529 132866647 -12722641 + AluJb SINE Alu 1 125 -187 192 40 0 0 chr10 132866647 132866672 -12722616 + (CA)n Simple_repeat Simple_repeat 1 25 0 1798 148 0 63 chr10 132866672 132866884 -12722404 + AluJb SINE Alu 125 310 -2 3100 235 92 48 chr10 132866884 132867505 -12721783 + L1M4 LINE L1 1860 2725 -4100 1758 168 17 0 chr10 132867831 132868123 -12721165 - AluJb SINE Alu -13 299 3 207 0 0 0 chr10 132868749 132868772 -12720516 + (T)n Simple_repeat Simple_repeat 1 23 0 1335 61 6 0 chr10 132869610 132869775 -12719513 + AluY SINE Alu 131 296 -15 841 111 8 0 chr10 132869867 132869984 -12719304 + FLAM_C SINE Alu 1 118 -15 310 196 42 42 chr10 132870143 132870311 -12718977 + (TTATA)n Simple_repeat Simple_repeat 3 170 0 279 296 0 25 chr10 132871550 132871631 -12717657 + Charlie1 DNA MER1_type 1 79 -2682 * 1891 194 104 14 chr10 132871622 132872189 -12717099 + Charlie1 DNA MER1_type 2144 2761 0 589 249 71 43 chr10 132873089 132873342 -12715946 - MIR SINE MIR -2 260 1 434 252 177 13 chr10 132873365 132873682 -12715606 + L1ME4a LINE L1 5678 6046 -75 2038 120 55 19 chr10 132873892 132874217 -12715071 + MER1B DNA MER1_type 1 337 0 2066 109 42 0 chr10 132874744 132875029 -12714259 - AluSq SINE Alu -16 297 1 2379 99 3 0 chr10 132875635 132875938 -12713350 - AluSx SINE Alu -8 304 1 459 194 339 16 chr10 132876362 132876548 -12712740 - MIR SINE MIR -1 261 16 1982 88 53 170 chr10 132876550 132877063 -12712225 + MLT2A2 LTR ERVL 1 453 0 2392 208 252 64 chr10 132877346 132878705 -12710583 + L1MC4a LINE L1 5812 7425 -383 639 163 0 32 chr10 132878764 132878887 -12710401 + MLT1A1 LTR MaLR 194 312 -53 227 157 98 0 chr10 132878897 132878948 -12710340 + L1MC4a LINE L1 7479 7534 -274 * 536 238 102 38 chr10 132878915 132879150 -12710138 + L1MC4 LINE L1 6338 6604 -1221 831 254 38 26 chr10 132879216 132879559 -12709729 + L1MC4 LINE L1 7694 8040 -2 25 0 0 0 chr10 132879807 132879832 -12709456 + AT_rich Low_complexity Low_complexity 1 25 0 4257 143 61 66 chr10 132980449 132981323 -12607965 + MER4D LTR ERV1 4 872 0 1445 244 69 44 chr10 132981990 132982441 -12606847 - MLT1C LTR MaLR 0 467 6 315 207 73 0 chr10 132982533 132982615 -12606673 - MER5A DNA MER1_type -87 102 15 2534 196 39 48 chr10 132983500 132984142 -12605146 + MER92B LTR ERV1 1 636 0 288 255 0 41 chr10 132984283 132984381 -12604907 + MIR3 SINE MIR 9 102 -106 493 100 22 0 chr10 132984577 132984667 -12604621 + (TG)n Simple_repeat Simple_repeat 1 92 0 2295 113 0 0 chr10 132986001 132986301 -12602987 - AluSg SINE Alu -10 300 1 290 243 0 0 chr10 132987135 132987209 -12602079 - L1M4 LINE L1 -2816 3330 3257 474 250 18 9 chr10 132987225 132987337 -12601951 + MLT2E LTR ERVL 12 124 -504 618 124 21 10 chr10 132987337 132987434 -12601854 + MER4A LTR ERV1 1 98 -566 2004 131 168 20 chr10 132987434 132987786 -12601502 + MER4A LTR ERV1 261 664 0 584 319 83 44 chr10 132987831 132988216 -12601072 + MLT2F LTR ERVL 192 591 -72 * 5227 147 39 11 chr10 132988208 132989074 -12600214 - MER4D LTR ERV1 -13 890 1 252 219 137 0 chr10 132989075 132989148 -12600140 + MLT2E LTR ERVL 536 618 -10 992 247 52 29 chr10 132989155 132989384 -12599904 - L1M4 LINE L1 -2898 3248 3026 3593 156 53 34 chr10 132989384 132990096 -12599192 - LTR8A LTR ERV1 0 727 2 992 247 52 29 chr10 132990096 132990348 -12598940 - L1M4 LINE L1 -3120 3026 2756 4179 58 4 19 chr10 132990361 132990881 -12598407 - SVA Other Other -2 1384 873 2550 172 0 0 chr10 132991581 132992016 -12597272 - L1MB7 LINE L1 -16 6168 5734 761 194 140 16 chr10 132992302 132992488 -12596800 + MER63A DNA MER1_type 2 210 0 2297 84 3 3 chr10 132992651 132992938 -12596350 - AluSq SINE Alu -16 297 11 991 167 117 40 chr10 132993274 132993573 -12595715 + MER33 DNA MER1_type 1 322 -2 503 278 117 0 chr10 132993623 132993828 -12595460 - MIR SINE MIR -11 251 23 1845 242 69 34 chr10 132993934 132994526 -12594762 - L1MC4 LINE L1 -4 8038 7426 1341 222 97 46 chr10 132995343 132995861 -12593427 + L1M4 LINE L1 2227 2770 -3376 3622 67 11 2 chr10 132995862 132996323 -12592965 + SVA Other Other 27 491 -895 387 230 11 0 chr10 132997804 132997891 -12591397 - MIR SINE MIR -109 153 66 275 269 101 8 chr10 132999203 132999322 -12589966 + L2 LINE L2 3180 3309 -4 1680 120 19 8 chr10 133000028 133000295 -12588993 - L1MA4 LINE L1 -2 6298 6029 412 284 44 49 chr10 133000396 133000579 -12588709 - MIR SINE MIR -20 242 61 228 253 123 62 chr10 133000633 133000795 -12588493 + MIR SINE MIR 79 250 -12 999 77 7 14 chr10 133001465 133001608 -12587680 + L1PA8A LINE L1 5962 6103 -28 228 67 0 0 chr10 133001614 133001644 -12587644 + (TAAAA)n Simple_repeat Simple_repeat 1 30 0 2267 98 10 3 chr10 133001735 133002032 -12587256 + AluSc SINE Alu 1 299 -10 418 218 102 26 chr10 133002112 133002327 -12586961 - L1MC5 LINE L1 -120 7922 7655 207 88 0 0 chr10 133002582 133002616 -12586672 + (T)n Simple_repeat Simple_repeat 1 34 0 250 159 68 0 chr10 133002830 133002874 -12586414 - MER81 DNA DNA 0 114 68 201 235 226 43 chr10 133003145 133003260 -12586028 + MER5B DNA MER1_type 14 149 -29 * 254 234 11 75 chr10 133003168 133003262 -12586026 - MER5A DNA MER1_type -63 126 39 2231 107 21 21 chr10 133003834 133004161 -12585127 - THE1B LTR MaLR -37 327 1 487 322 135 4 chr10 133004362 133004592 -12584696 + MIR SINE MIR 3 262 0 2111 175 7 47 chr10 133004814 133005220 -12584068 - MLT1B LTR MaLR 0 390 1 489 205 0 0 chr10 133006054 133006181 -12583107 + (CA)n Simple_repeat Simple_repeat 2 128 0 195 42 0 0 chr10 133006698 133006722 -12582566 + (CA)n Simple_repeat Simple_repeat 2 25 0 214 282 39 51 chr10 133007093 133007171 -12582117 + MIR SINE MIR 6 82 -180 2313 105 0 7 chr10 133007218 133007523 -12581765 + AluSx SINE Alu 1 303 -9 339 260 137 90 chr10 133008872 133009087 -12580201 - MLT1L LTR MaLR -11 604 275 2256 100 10 7 chr10 133009479 133009778 -12579510 + AluSx SINE Alu 1 300 -12 22 35 0 0 chr10 133010345 133010374 -12578914 + AT_rich Low_complexity Low_complexity 1 29 0 286 333 0 0 chr10 133010999 133011095 -12578193 - MIR3 SINE MIR -30 178 83 231 301 0 0 chr10 133011873 133011946 -12577342 + L3 LINE CR1 1503 1575 -2 22 0 0 0 chr10 133013060 133013082 -12576206 + AT_rich Low_complexity Low_complexity 1 22 0 2194 120 0 0 chr10 133013756 133014048 -12575240 + AluSg SINE Alu 1 292 -18 490 267 40 13 chr10 133014159 133014309 -12574979 - LTR16B LTR ERVL -139 325 172 323 217 96 43 chr10 133015139 133015254 -12574034 + MER102b DNA MER1_type 193 313 -28 226 208 0 0 chr10 133015293 133015341 -12573947 + CT-rich Low_complexity Low_complexity 1 48 0 3319 139 45 4 chr10 133015505 133015809 -12573479 + MER41C LTR ERV1 1 339 -215 2098 110 0 7 chr10 133015809 133016128 -12573160 - AluSc SINE Alu 0 317 1 3319 139 45 4 chr10 133016128 133016354 -12572934 + MER41C LTR ERV1 339 554 0 1912 42 17 4 chr10 133016791 133017030 -12572258 - L1P LINE L1 -2371 3775 3534 857 76 0 17 chr10 133017030 133017149 -12572139 + L1PA5 LINE L1 6037 6153 -1 186 306 109 34 chr10 133017215 133017362 -12571926 + MIR SINE MIR 77 234 -28 4235 153 16 11 chr10 133017362 133018070 -12571218 - MER50 LTR ERV1 -23 711 1 275 286 16 0 chr10 133018089 133018152 -12571136 + MER91 DNA MER1_type 1 64 -76 1988 194 18 34 chr10 133018573 133019011 -12570277 + MER57B LTR ERV1 4 434 0 714 250 108 8 chr10 133019427 133019687 -12569601 - Tigger8 DNA MER2_type -289 377 92 222 333 11 11 chr10 133020138 133020225 -12569063 - L2 LINE L2 -542 2772 2686 248 305 204 6 chr10 133020651 133020818 -12568470 + MIR3 SINE MIR 2 201 -7 204 234 62 31 chr10 133020828 133020892 -12568396 - L2 LINE L2 -47 3266 3201 2423 58 3 32 chr10 133021402 133021713 -12567575 + AluY SINE Alu 1 302 -9 687 345 20 4 chr10 133021783 133022038 -12567250 - MIR SINE MIR -3 259 1 1220 181 138 17 chr10 133023226 133023524 -12565764 + MER2 DNA MER2_type 1 334 -11 565 296 32 32 chr10 133023637 133023890 -12565398 - MIR SINE MIR -9 253 1 534 94 62 31 chr10 133024606 133024702 -12564586 + LTR54 LTR ERV1 1 99 -411 668 215 168 23 chr10 133024712 133024952 -12564336 + MER57A LTR ERV1 107 347 -56 403 78 117 26 chr10 133024926 133025003 -12564285 + LTR54 LTR ERV1 427 510 0 * 2212 114 26 32 chr10 133025308 133025685 -12563603 + THE1C LTR MaLR 1 375 0 342 284 18 9 chr10 133026151 133026260 -12563028 - L1ME3A LINE L1 -273 5897 5788 379 158 39 0 chr10 133026551 133026678 -12562610 + (TA)n Simple_repeat Simple_repeat 1 132 0 258 32 0 0 chr10 133026673 133026704 -12562584 + (CA)n Simple_repeat Simple_repeat 2 32 0 * 681 295 52 11 chr10 133026866 133027307 -12561981 - L1ME3A LINE L1 -1381 4765 4307 4652 99 4 15 chr10 133027438 133028123 -12561165 - L1PA13 LINE L1 -2 6161 5484 695 241 15 65 chr10 133028588 133028850 -12560438 + MLT1A1 LTR MaLR 1 249 -116 1618 71 14 0 chr10 133028906 133029116 -12560172 - AluY SINE Alu 0 311 99 655 102 16 0 chr10 133029226 133029354 -12559934 + (TA)n Simple_repeat Simple_repeat 1 130 0 276 30 0 0 chr10 133029369 133029402 -12559886 + (TAGA)n Simple_repeat Simple_repeat 2 34 0 247 65 0 109 chr10 133029402 133029448 -12559840 + MLT2A2 LTR ERVL 413 453 0 214 178 0 0 chr10 133029519 133029564 -12559724 + (TTCA)n Simple_repeat Simple_repeat 2 46 0 396 317 264 26 chr10 133029564 133029791 -12559497 - L2 LINE L2 0 3272 2992 1974 142 43 3 chr10 133030683 133031007 -12558281 + MER1B DNA MER1_type 1 337 0 489 182 0 0 chr10 133031930 133032029 -12557259 + CT-rich Low_complexity Low_complexity 1 99 0 2062 117 27 10 chr10 133032029 133032327 -12556961 - AluSx SINE Alu -9 303 1 352 289 105 26 chr10 133032666 133032856 -12556432 + MIR SINE MIR 58 262 0 880 181 70 10 chr10 133034166 133034365 -12554923 - MER106A DNA MER1_type -10 226 16 275 250 277 0 chr10 133034415 133034527 -12554761 - MIR SINE MIR -112 150 8 180 267 120 40 chr10 133034901 133034976 -12554312 - L3 LINE CR1 -56 1521 1441 2026 107 22 4 chr10 133035070 133035378 -12553910 - AluSx SINE Alu 0 319 7 1276 246 41 5 chr10 133035443 133035834 -12553454 - L1ME LINE L1 -491 5671 5267 595 225 42 0 chr10 133035873 133035993 -12553295 + FLAM_C SINE Alu 1 125 -18 557 279 178 5 chr10 133036397 133036605 -12552683 - MIR SINE MIR -1 261 18 3829 108 6 9 chr10 133037705 133038234 -12551054 + MER1A DNA MER1_type 1 527 0 324 233 82 0 chr10 133038538 133038611 -12550677 + L2 LINE L2 3223 3301 -12 387 0 0 0 chr10 133039132 133039175 -12550113 + (CA)n Simple_repeat Simple_repeat 2 44 0 370 376 75 47 chr10 133039706 133040108 -12549180 - L2 LINE L2 0 3272 2860 198 296 130 37 chr10 133041259 133041367 -12547921 + L2 LINE L2 3155 3272 0 545 261 136 48 chr10 133042294 133042669 -12546619 - L1ME3A LINE L1 -224 5946 5539 180 97 0 0 chr10 133043183 133043214 -12546074 + (A)n Simple_repeat Simple_repeat 1 31 0 267 265 60 24 chr10 133043393 133043476 -12545812 + L2 LINE L2 3186 3271 -1 4073 113 23 17 chr10 133044306 133044950 -12544338 - MER39B LTR ERV1 -5 648 1 837 184 0 13 chr10 133045253 133045405 -12543883 + MLT1D LTR MaLR 22 171 -334 1083 190 9 5 chr10 133045411 133045627 -12543661 + MLT1D LTR MaLR 289 505 0 1273 201 108 27 chr10 133045685 133046018 -12543270 - MLT1A1 LTR MaLR -2 363 4 946 279 47 67 chr10 133046040 133046546 -12542742 - L2 LINE L2 -1 3312 2817 199 222 0 0 chr10 133047026 133047071 -12542217 + MIR SINE MIR 108 152 -56 187 309 71 32 chr10 133048424 133048550 -12540738 - MIR SINE MIR -49 213 83 2193 124 3 13 chr10 133048579 133048893 -12540395 - AluSx SINE Alu -1 311 1 1157 182 19 0 chr10 133049229 133049443 -12539845 - MER20 DNA MER1_type -1 218 1 471 351 150 3 chr10 133050004 133050383 -12538905 - L1MEd LINE L1 -3509 2620 2186 283 366 65 8 chr10 133050669 133050915 -12538373 - HAL1 LINE L1 -738 1769 1510 312 306 16 11 chr10 133050957 133051143 -12538145 - L1MEd LINE L1 -5017 1102 916 234 284 15 0 chr10 133052074 133052141 -12537147 + L2 LINE L2 3241 3308 -5 234 242 0 0 chr10 133052628 133052694 -12536594 + A-rich Low_complexity Low_complexity 5 70 0 569 321 0 16 chr10 133053189 133053376 -12535912 - MIR SINE MIR -13 249 66 194 311 87 0 chr10 133053612 133053715 -12535573 + L2 LINE L2 1889 2000 -1314 2323 86 3 10 chr10 133054527 133054828 -12534460 + AluY SINE Alu 1 299 -12 301 211 0 0 chr10 133055880 133055937 -12533351 + MLT1K LTR MaLR 528 584 -4 230 263 121 10 chr10 133056317 133056416 -12532872 - MIR SINE MIR -32 230 121 375 0 55 0 chr10 133056443 133056498 -12532790 + (GA)n Simple_repeat Simple_repeat 1 58 0 2379 91 0 7 chr10 133057031 133057329 -12531959 + AluSg SINE Alu 5 300 -10 231 191 0 85 chr10 133057485 133057529 -12531759 - L1ME LINE L1 -232 5889 5856 1523 236 46 29 chr10 133057529 133057983 -12531305 + LTR40b LTR ERVL 1 462 0 231 191 0 85 chr10 133057983 133058032 -12531256 - L1ME LINE L1 -265 5856 5804 1540 220 154 19 chr10 133058500 133058987 -12530301 - REP3 LTR ERV -9 553 1 245 273 152 61 chr10 133059156 133059321 -12529967 - MIR SINE MIR -33 229 50 972 137 9 12 chr10 133060130 133060471 -12528817 + (TA)n Simple_repeat Simple_repeat 2 341 0 1576 172 90 25 chr10 133060494 133060970 -12528318 - MLT2A1 LTR ERVL -40 514 4 209 277 234 11 chr10 133061222 133061316 -12527972 - MIR SINE MIR -64 144 30 201 258 21 103 chr10 133061441 133061538 -12527750 + MIR SINE MIR 42 130 -78 696 281 52 17 chr10 133061636 133061867 -12527421 - MIR SINE MIR 0 262 24 254 243 57 0 chr10 133061864 133061934 -12527354 + MIR SINE MIR 189 262 0 * 2135 16 4 0 chr10 133062686 133062928 -12526360 + AluY SINE Alu 68 310 -1 217 322 81 16 chr10 133062930 133063074 -12526214 + MIR SINE MIR 19 173 -77 269 279 0 35 chr10 133064356 133064442 -12524846 + MIR3 SINE MIR 125 207 -1 509 177 10 0 chr10 133064601 133064697 -12524591 + MLT1C LTR MaLR 1 97 -370 7273 22 0 1 chr10 133064697 133065545 -12523743 + L1PA4 LINE L1 5309 6155 0 27 0 0 0 chr10 133065545 133065572 -12523716 + AT_rich Low_complexity Low_complexity 1 27 0 2087 151 8 35 chr10 133065572 133065678 -12523610 + MLT1C LTR MaLR 81 188 -279 2097 146 0 0 chr10 133065678 133065986 -12523302 + AluSx SINE Alu 1 308 -4 2087 151 8 35 chr10 133065986 133066277 -12523011 + MLT1C LTR MaLR 188 467 0 384 267 57 28 chr10 133066277 133066449 -12522839 - Charlie8 DNA MER1_type -2195 222 46 282 230 0 0 chr10 133066995 133067069 -12522219 - MER58 DNA MER1_type -148 193 120 1118 271 78 47 chr10 133067166 133068210 -12521078 + L1MEc LINE L1 2103 3130 -3085 528 164 17 43 chr10 133068269 133068385 -12520903 + L1MC3 LINE L1 6593 6705 -1080 2363 95 31 17 chr10 133068388 133068747 -12520541 - THE1B LTR MaLR 0 364 1 309 284 76 35 chr10 133069162 133069787 -12519501 - L1ME LINE L1 -584 5651 5010 1947 143 29 40 chr10 133069948 133070327 -12518961 + THE1C LTR MaLR 1 375 0 541 270 46 74 chr10 133070591 133071117 -12518171 - L1ME LINE L1 -1709 4506 3996 4821 99 11 0 chr10 133071243 133071880 -12517408 - L1PA13 LINE L1 0 6163 5520 887 161 81 31 chr10 133071902 133072125 -12517163 - Charlie1 DNA MER1_type -2 2759 2526 403 233 60 23 chr10 133072188 133072321 -12516967 - L1ME LINE L1 -4433 1963 1826 561 203 21 8 chr10 133072967 133073079 -12516209 + CT-rich Low_complexity Low_complexity 1 110 -446 2031 135 26 3 chr10 133073079 133073382 -12515906 - AluSx SINE Alu -2 310 1 561 203 21 8 chr10 133073382 133073516 -12515772 + CT-rich Low_complexity Low_complexity 110 556 0 1281 179 49 39 chr10 133073542 133073964 -12515324 + MLT1D LTR MaLR 1 502 -3 1362 129 12 42 chr10 133074310 133074550 -12514738 + L1MB7 LINE L1 5934 6166 -18 2046 137 3 3 chr10 133075903 133076203 -12513085 - AluJo SINE Alu -12 300 1 429 268 0 10 chr10 133076827 133076924 -12512364 + MER81 DNA DNA 15 110 -4 2019 160 39 25 chr10 133076924 133077287 -12512001 + MLT1C LTR MaLR 1 368 -99 2603 58 0 3 chr10 133077698 133078010 -12511278 - AluY SINE Alu 0 311 1 2403 97 3 0 chr10 133079094 133079404 -12509884 - AluSp SINE Alu -2 311 1 368 198 77 11 chr10 133080507 133080598 -12508690 - MER94 DNA DNA -35 99 3 1151 151 8 97 chr10 133080763 133081001 -12508287 - MER20 DNA MER1_type 0 219 3 710 257 55 10 chr10 133081134 133081336 -12507952 + MIR SINE MIR 8 218 -44 542 247 82 6 chr10 133082758 133082916 -12506372 + MIR SINE MIR 64 233 -29 190 315 154 28 chr10 133083137 133083280 -12506008 + MIR3 SINE MIR 41 201 -7 453 257 42 96 chr10 133083511 133083772 -12505516 + MLT1K LTR MaLR 336 582 -6 641 271 116 36 chr10 133084833 133085272 -12504016 - MLT1L LTR MaLR -3 612 139 427 259 37 63 chr10 133085689 133085878 -12503410 - MER5A DNA MER1_type -5 184 1 504 293 57 47 chr10 133085891 133086191 -12503097 - LTR16C LTR ERVL 0 491 189 2117 122 7 0 chr10 133086577 133086871 -12502417 + AluSx SINE Alu 1 296 -16 390 296 46 41 chr10 133087103 133087299 -12501989 - L2 LINE L2 0 3313 3117 1269 141 0 0 chr10 133087404 133087603 -12501685 + L1PBa LINE L1 3 201 -6662 787 127 0 0 chr10 133087604 133087722 -12501566 + L1PBa LINE L1 636 753 -6110 233 354 71 9 chr10 133087760 133087873 -12501415 - L2 LINE L2 -186 3086 2967 798 281 123 12 chr10 133088175 133088509 -12500779 + ERVL LTR ERVL 4183 4553 -1211 521 123 0 12 chr10 133088599 133088680 -12500608 + MER116 DNA Mariner 1 80 0 423 56 0 0 chr10 133088969 133089023 -12500265 + (TG)n Simple_repeat Simple_repeat 2 55 0 346 279 23 31 chr10 133089203 133089332 -12499956 + LTR67 LTR ERVL 430 557 0 2213 132 0 0 chr10 133089387 133089697 -12499591 - AluSx SINE Alu -2 310 1 204 328 130 23 chr10 133090227 133090358 -12498930 - L2 LINE L2 -5 3267 3123 1801 141 7 36 chr10 133090457 133090763 -12498525 - AluJo SINE Alu -15 297 1 370 329 162 6 chr10 133092315 133092674 -12496614 + L1ME4a LINE L1 5634 6048 -73 2306 143 42 47 chr10 133092819 133093247 -12496041 - MSTB LTR MaLR 0 426 1 549 290 32 19 chr10 133093875 133094066 -12495222 - MIR SINE MIR -57 205 17 226 308 0 0 chr10 133094173 133094238 -12495050 - MIR SINE MIR -161 101 37 477 292 39 8 chr10 133094772 133094902 -12494386 + MIR SINE MIR 20 153 -55 2484 68 0 0 chr10 133095591 133095898 -12493390 + AluY SINE Alu 4 310 -1 1936 138 17 3 chr10 133096261 133096558 -12492730 + AluSx SINE Alu 1 301 -11 343 291 43 21 chr10 133096614 133096755 -12492533 - MIR SINE MIR -35 227 84 198 259 0 19 chr10 133096853 133096907 -12492381 + MIR SINE MIR 198 250 -12 279 196 0 0 chr10 133097353 133097404 -12491884 + L1MB8 LINE L1 5205 5255 -891 1099 135 12 0 chr10 133097417 133097580 -12491708 + FRAM SINE Alu 12 176 0 4866 186 13 11 chr10 133097587 133098502 -12490786 + L1MB8 LINE L1 5256 6172 -6 373 275 190 35 chr10 133098583 133098783 -12490505 + MIR SINE MIR 14 244 -18 197 339 0 0 chr10 133099477 133099533 -12489755 - L2 LINE L2 -11 3261 3206 567 279 20 30 chr10 133099714 133099911 -12489377 - MLT1J LTR MaLR -308 203 9 187 296 0 68 chr10 133100089 133100177 -12489111 - L2 LINE L2 -1384 1930 1849 2148 113 57 104 chr10 133100227 133100697 -12488591 + LTR7 LTR ERV1 1 448 -2 16495 91 37 7 chr10 133100699 133103476 -12485812 + HERVH LTR ERV1 1 2987 -4726 925 135 20 0 chr10 133103470 133103618 -12485670 + HERVH LTR ERV1 3140 3290 -4423 * 3434 110 6 2 chr10 133103608 133104108 -12485180 + HERVH LTR ERV1 3492 3993 -3720 4188 149 6 6 chr10 133104110 133104772 -12484516 + HERVH LTR ERV1 4488 5149 -2564 1324 128 43 0 chr10 133104773 133104984 -12484304 + HERVH LTR ERV1 5600 5819 -1894 * 2586 77 45 3 chr10 133104982 133105358 -12483930 + HERVH LTR ERV1 7322 7713 0 2094 120 92 58 chr10 133105358 133105791 -12483497 + LTR7 LTR ERV1 1 448 -2 301 248 120 26 chr10 133106132 133106249 -12483039 + L2 LINE L2 3167 3294 -19 2427 78 0 0 chr10 133108502 133108795 -12480493 - AluY SINE Alu -17 294 2 521 343 184 9 chr10 133108807 133109242 -12480046 - L2 LINE L2 -575 2739 2229 4500 174 63 3 chr10 133109248 133110114 -12479174 - L1MB7 LINE L1 0 6184 5267 848 142 8 0 chr10 133110114 133110241 -12479047 - MER44D DNA MER2_type 0 605 478 2200 170 60 10 chr10 133110244 133110643 -12478645 - MER44D DNA MER2_type -70 535 62 1346 178 52 0 chr10 133110643 133110912 -12478376 - L1MB7 LINE L1 -904 5242 4960 952 242 76 26 chr10 133110912 133111214 -12478074 - L1MB7 LINE L1 -1812 4334 4018 862 269 59 43 chr10 133111283 133111524 -12477764 - L1MEc LINE L1 -4602 1794 1543 2253 125 0 0 chr10 133111524 133111828 -12477460 + AluSx SINE Alu 1 304 -8 862 269 59 43 chr10 133111828 133111977 -12477311 - L1MEc LINE L1 -4853 1543 1398 439 137 25 50 chr10 133112004 133112059 -12477229 + (CATATA)n Simple_repeat Simple_repeat 6 61 -101 2402 210 110 39 chr10 133112059 133112669 -12476619 + MER82 DNA MER2_type 1 653 0 439 137 25 50 chr10 133112669 133112774 -12476514 + (CATATA)n Simple_repeat Simple_repeat 61 162 0 266 246 0 0 chr10 133112926 133112991 -12476297 + (TA)n Simple_repeat Simple_repeat 1 65 0 244 257 167 59 chr10 133113027 133113249 -12476039 - L2 LINE L2 -45 3268 3023 2502 81 0 0 chr10 133114489 133114798 -12474490 - AluY SINE Alu -2 309 1 222 260 0 0 chr10 133114866 133114916 -12474372 - L2 LINE L2 -8 3305 3256 216 0 0 0 chr10 133115186 133115210 -12474078 + (CA)n Simple_repeat Simple_repeat 2 25 0 520 264 116 61 chr10 133116083 133116394 -12472894 - L2 LINE L2 0 3313 2986 2091 103 3 0 chr10 133117360 133117642 -12471646 - AluSg SINE Alu 0 310 28 259 291 89 56 chr10 133118617 133118796 -12470492 + MIR SINE MIR 78 262 0 462 261 67 24 chr10 133119315 133119480 -12469808 - MIR SINE MIR -42 220 49 194 182 45 23 chr10 133119798 133119842 -12469446 - MIR SINE MIR -97 111 76 413 336 131 40 chr10 133122714 133123035 -12466253 + L2 LINE L2 2922 3271 -1 2249 107 0 10 chr10 133123403 133123703 -12465585 + AluSx SINE Alu 1 297 -15 617 249 106 37 chr10 133123734 133123951 -12465337 - MIR SINE MIR -11 251 20 185 122 216 95 chr10 133123957 133124031 -12465257 + MIR SINE MIR 50 132 -76 2682 16 0 10 chr10 133124338 133124645 -12464643 - AluY SINE Alu -7 304 1 21 57 0 0 chr10 133124745 133124780 -12464508 + AT_rich Low_complexity Low_complexity 1 35 0 2224 97 0 0 chr10 133125007 133125320 -12463968 - AluSc SINE Alu 0 313 1 227 281 0 0 chr10 133125526 133125583 -12463705 + (TATATG)n Simple_repeat Simple_repeat 2 58 0 23 0 0 0 chr10 133127008 133127031 -12462257 + AT_rich Low_complexity Low_complexity 1 23 0 480 305 128 9 chr10 133128384 133128610 -12460678 - MIR SINE MIR -7 255 3 390 115 0 126 chr10 133129378 133129424 -12459864 + MADE1 DNA Mariner 1 33 -47 236 0 67 22 chr10 133129424 133129469 -12459819 + (TTG)n Simple_repeat Simple_repeat 2 48 0 390 115 0 126 chr10 133129469 133129509 -12459779 + MADE1 DNA Mariner 33 76 -4 35 54 0 0 chr10 133129589 133129645 -12459643 + AT_rich Low_complexity Low_complexity 1 56 0 2710 98 8 3 chr10 133129645 133130031 -12459257 - L1PA10 LINE L1 -10 6158 5771 2913 67 0 0 chr10 133130037 133130413 -12458875 - L1PA8 LINE L1 0 6172 5797 2127 131 7 0 chr10 133130747 133131044 -12458244 - AluSx SINE Alu -13 299 1 2397 100 0 3 chr10 133131209 133131519 -12457769 - AluSq SINE Alu -4 309 1 373 259 65 58 chr10 133131950 133132089 -12457199 - MIR SINE MIR -12 250 111 1032 183 12 0 chr10 133132698 133132885 -12456403 + AluSg/x SINE Alu 121 309 0 2090 118 10 13 chr10 133135619 133135923 -12453365 + AluSx SINE Alu 3 305 -7 3991 227 106 47 chr10 133136588 133138416 -12450872 - L1M4 LINE L1 -1450 4696 2760 481 301 56 42 chr10 133139318 133139887 -12449401 + L1M4 LINE L1 4583 5159 -987 328 294 29 42 chr10 133139950 133140124 -12449164 + L1M4 LINE L1 5254 5425 -745 286 312 7 0 chr10 133140144 133140270 -12449018 + L1M4 LINE L1 5456 5586 -583 240 86 0 0 chr10 133140525 133140560 -12448728 + (CA)n Simple_repeat Simple_repeat 2 36 0 510 237 101 29 chr10 133142258 133142453 -12446835 - MIR SINE MIR -49 213 8 1155 237 32 11 chr10 133142791 133143070 -12446218 - MLT1F LTR MaLR -124 418 134 23 78 0 0 chr10 133143167 133143218 -12446070 + AT_rich Low_complexity Low_complexity 1 51 0 696 274 81 14 chr10 133143423 133143646 -12445642 - MIR SINE MIR -2 260 23 28 29 0 0 chr10 133144229 133144264 -12445024 + AT_rich Low_complexity Low_complexity 1 35 0 2339 73 0 10 chr10 133144476 133144778 -12444510 - AluY SINE Alu -12 299 1 2113 109 0 3 chr10 133145426 133145752 -12443536 - AluSp SINE Alu 0 325 1 23 0 0 0 chr10 133145753 133145776 -12443512 + AT_rich Low_complexity Low_complexity 1 23 0 7692 25 0 0 chr10 133148255 133149489 -12439799 - L1PA4 LINE L1 -3 6152 4919 260 203 0 14 chr10 133150878 133150947 -12438341 + L1MC4a LINE L1 5350 5417 -2391 24 32 0 0 chr10 133150979 133151010 -12438278 + AT_rich Low_complexity Low_complexity 1 31 0 3071 273 118 42 chr10 133151011 133153125 -12436163 + L1MC4a LINE L1 5410 7683 -125 21 36 0 0 chr10 133153128 133153156 -12436132 + AT_rich Low_complexity Low_complexity 1 28 0 22 56 0 0 chr10 133153192 133153228 -12436060 + AT_rich Low_complexity Low_complexity 1 36 0 1335 175 44 39 chr10 133153253 133153642 -12435646 - Charlie5 DNA MER1_type 0 2624 2234 1663 172 42 31 chr10 133153762 133154122 -12435166 + THE1B LTR MaLR 1 364 0 33 0 0 0 chr10 133154603 133154636 -12434652 + AT_rich Low_complexity Low_complexity 1 33 0 2373 109 0 0 chr10 133154739 133155051 -12434237 + AluSx SINE Alu 1 312 0 1375 109 0 0 chr10 133158595 133158778 -12430510 + AluSg/x SINE Alu 130 312 0 397 167 48 12 chr10 133160226 133160310 -12428978 + MER94 DNA DNA 35 121 -13 180 111 0 0 chr10 133162800 133162827 -12426461 + (TC)n Simple_repeat Simple_repeat 2 28 0 24 0 0 0 chr10 133162834 133162858 -12426430 + AT_rich Low_complexity Low_complexity 1 24 0 1664 179 14 3 chr10 133162883 133163180 -12426108 - AluJo SINE Alu -11 301 2 30 0 0 0 chr10 133163312 133163342 -12425946 + AT_rich Low_complexity Low_complexity 1 30 0 747 80 0 0 chr10 133165206 133165306 -12423982 - LTR12 LTR ERV1 0 714 615 346 232 10 0 chr10 133165308 133165407 -12423881 - LTR30 LTR ERV1 -79 643 544 1395 98 42 67 chr10 133165407 133165692 -12423596 - LTR12 LTR ERV1 -437 1683 52 231 235 0 0 chr10 133165693 133165744 -12423544 - LTR30 LTR ERV1 -671 51 1 833 173 92 74 chr10 133165918 133166189 -12423099 - MLT1A2 LTR MaLR -16 358 83 41132 30 22 1 chr10 133166198 133172219 -12417069 + L1PA3 LINE L1 1 6151 -4 245 246 0 0 chr10 133172230 133172287 -12417001 - MLT1A2 LTR MaLR -286 88 32 1827 115 10 54 chr10 133174075 133174389 -12414899 + AluSx SINE Alu 2 301 -11 691 122 0 0 chr10 133174396 133174494 -12414794 + AluSq SINE Alu 131 228 -85 808 95 26 0 chr10 133174494 133174610 -12414678 + AluSp/q SINE Alu 181 299 -14 18999 28 0 1 chr10 133174611 133177614 -12411674 + L1PA2 LINE L1 3152 6154 -1 407 236 158 24 chr10 133178008 133178173 -12411115 - MIR SINE MIR -44 218 32 236 139 0 28 chr10 133178187 133178247 -12411041 - AluSq SINE Alu 0 306 248 1299 122 15 10 chr10 133178247 133178452 -12410836 - AluSq SINE Alu -107 206 1 1833 160 114 2 chr10 133179206 133179600 -12409688 + MLT1D LTR MaLR 7 505 0 7326 28 0 0 chr10 133180180 133181026 -12408262 + L1PA2 LINE L1 5310 6155 0 1828 106 14 4 chr10 133181127 133181402 -12407886 + AluSc SINE Alu 24 301 -8 2152 79 3 13 chr10 133181443 133181747 -12407541 - AluSc SINE Alu 0 309 9 531 274 69 49 chr10 133181848 133182052 -12407236 + MER58A DNA MER1_type 16 223 -1 4662 133 67 78 chr10 133182288 133183268 -12406020 + pTR5 LTR ERV1 741 1999 -439 378 282 23 15 chr10 133183268 133183399 -12405889 + LTR30 LTR ERV1 517 648 -74 1536 97 5 0 chr10 133183402 133183619 -12405669 + pTR5 LTR ERV1 177 394 -2044 246 188 225 25 chr10 133184606 133184686 -12404602 + MIR SINE MIR 77 172 -90 276 230 345 0 chr10 133186764 133186877 -12402411 + MIR SINE MIR 14 165 -97 567 254 14 0 chr10 133187214 133187356 -12401932 - MER103 DNA DNA -11 155 12 270 136 0 0 chr10 133187386 133187430 -12401858 + (TCCC)n Simple_repeat Simple_repeat 1 44 0 2525 55 0 0 chr10 133187551 133187862 -12401426 - AluY SINE Alu 0 311 1 336 207 24 0 chr10 133188354 133188436 -12400852 - L3 LINE CR1 -89 1488 1405 621 295 109 9 chr10 133188513 133188723 -12400565 + MIR SINE MIR 4 234 -28 234 247 123 0 chr10 133189584 133189665 -12399623 - MIR SINE MIR -72 190 100 429 237 93 0 chr10 133189668 133189765 -12399523 + MER81 DNA DNA 2 107 -7 1241 245 98 19 chr10 133191335 133191764 -12397524 + MLT1C LTR MaLR 1 463 -4 499 236 29 21 chr10 133192361 133192501 -12396787 + MER103 DNA DNA 6 146 -20 2062 191 52 66 chr10 133193056 133193617 -12395671 - MLT2B3 LTR ERVL 0 554 2 1959 109 33 3 chr10 133193808 133194110 -12395178 - AluSx SINE Alu -1 311 1 635 290 70 28 chr10 133194185 133194754 -12394534 - L1MEc LINE L1 -3775 2440 1878 240 263 101 0 chr10 133194847 133194946 -12394342 - L1MEc LINE L1 -4660 1736 1628 338 298 38 3 chr10 133195045 133195200 -12394088 - L1M1 LINE L1 -922 3004 2758 487 0 16 16 chr10 133195221 133195285 -12394003 + (TCTA)n Simple_repeat Simple_repeat 4 67 0 1845 134 0 21 chr10 133195294 133195578 -12393710 - AluSg SINE Alu -30 280 3 26 50 0 0 chr10 133195578 133195618 -12393670 + AT_rich Low_complexity Low_complexity 1 40 0 499 284 96 15 chr10 133196532 133196729 -12392559 - Charlie8 DNA MER1_type -2201 216 4 2360 59 0 10 chr10 133196766 133197070 -12392218 - AluY SINE Alu -10 301 1 297 236 11 56 chr10 133197279 133197368 -12391920 - MER5B DNA MER1_type -85 93 9 234 314 129 8 chr10 133197546 133197670 -12391618 + MIR SINE MIR 20 158 -104 307 324 101 42 chr10 133198845 133199083 -12390205 + L1ME4a LINE L1 5535 5786 -335 254 351 54 40 chr10 133199101 133199323 -12389965 + L2 LINE L2 2592 2816 -498 252 340 35 7 chr10 133199418 133199562 -12389726 + L2 LINE L2 2871 3018 -254 186 330 21 41 chr10 133199661 133199758 -12389530 + L2 LINE L2 3198 3292 -21 277 272 87 55 chr10 133199758 133200012 -12389276 + L1ME4a LINE L1 5845 6106 -15 760 150 8 45 chr10 133200012 133200145 -12389143 - FLAM_C SINE Alu -13 130 3 2330 57 3 3 chr10 133200842 133201169 -12388119 + AluY SINE Alu 1 311 0 581 241 106 0 chr10 133201354 133201495 -12387793 - MER5A DNA MER1_type -26 163 8 268 256 64 3 chr10 133201509 133201613 -12387675 + MIR SINE MIR 28 140 -68 642 264 87 69 chr10 133202675 133202757 -12386531 - MER115 DNA AcHobo -10 683 604 1926 104 3 49 chr10 133202757 133203065 -12386223 + AluSx SINE Alu 1 294 -18 642 264 87 69 chr10 133203065 133203316 -12385972 - MER115 DNA AcHobo -89 604 344 225 184 20 20 chr10 133203353 133203402 -12385886 - MER115 DNA AcHobo -436 257 209 249 262 101 101 chr10 133203744 133203893 -12385395 - MER5A DNA MER1_type -35 154 6 192 256 156 98 chr10 133203941 133204300 -12384988 + L2 LINE L2 2934 3313 0 1601 219 44 17 chr10 133205625 133206035 -12383253 + Charlie4a DNA MER1_type 4 424 -84 992 64 14 14 chr10 133206105 133206246 -12383042 - AluSg/x SINE Alu 0 312 172 245 291 13 13 chr10 133206246 133206325 -12382963 + L2 LINE L2 3235 3313 0 7612 27 40 0 chr10 133206657 133207659 -12381629 - L1PA4 LINE L1 0 6155 5144 216 298 97 24 chr10 133208223 133208347 -12380941 + MIR SINE MIR 108 240 -22 359 303 131 51 chr10 133210843 133211256 -12378032 + L1ME4a LINE L1 4885 5330 -816 399 282 196 26 chr10 133211308 133211620 -12377668 + L1ME4a LINE L1 5519 5883 -238 651 228 91 25 chr10 133212336 133212533 -12376755 - MER63A DNA MER1_type 0 210 1 799 224 127 85 chr10 133212538 133213018 -12376270 - MLT1G LTR MaLR -47 520 3 232 252 52 87 chr10 133213302 133213417 -12375871 - MARNA DNA Mariner -458 128 18 392 271 132 10 chr10 133214076 133214257 -12375031 + MLT1J2 LTR MaLR 3 196 -213 1909 241 17 8 chr10 133214498 133215016 -12374272 - L1MCa LINE L1 -2221 4205 3683 1355 180 95 12 chr10 133215016 133215380 -12373908 + MSTB1 LTR MaLR 1 426 0 403 244 89 0 chr10 133215381 133215516 -12373772 - L1MCa LINE L1 -2739 3687 3541 390 84 0 70 chr10 133215517 133215588 -12373700 - L1PA10 LINE L1 -2 6166 6101 1054 137 0 6 chr10 133215606 133215767 -12373521 - FRAM SINE Alu -22 154 1 3743 201 21 26 chr10 133215767 133217405 -12371883 - L1MCa LINE L1 -2856 3570 1943 552 117 0 0 chr10 133217407 133217484 -12371804 + AluSp SINE Alu 43 119 -194 3059 256 57 60 chr10 133217633 133218904 -12370384 + HAL1 LINE L1 1237 2503 -4 552 216 125 109 chr10 133219085 133219590 -12369698 + HAL1 LINE L1 839 1351 -1156 216 67 0 0 chr10 133220240 133220270 -12369018 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 282 326 56 0 chr10 133220461 133220550 -12368738 - L2 LINE L2 0 3272 3179 * 360 335 84 19 chr10 133220538 133220693 -12368595 - MIR3 SINE MIR -5 203 39 293 324 78 0 chr10 133222200 133222342 -12366946 - MIR3 SINE MIR -4 204 52 5741 194 48 32 chr10 133222416 133224744 -12364544 - L1MC1 LINE L1 -13 6320 3952 2099 70 0 37 chr10 133224773 133225073 -12364215 - AluY SINE Alu -22 289 1 297 236 11 56 chr10 133225282 133225371 -12363917 - MER5B DNA MER1_type -85 93 9 234 314 129 8 chr10 133225549 133225673 -12363615 + MIR SINE MIR 20 158 -104 1368 109 5 10 chr10 133226544 133226745 -12362543 + AluSp SINE Alu 113 312 -1 1351 136 17 17 chr10 133226745 133226981 -12362307 - L1MCa LINE L1 -4497 1929 1694 1308 204 32 7 chr10 133226981 133227266 -12362022 - L1MCa LINE L1 -6128 298 7 406 318 43 8 chr10 133229286 133229501 -12359787 + MIR SINE MIR 13 235 -27 841 114 0 2 chr10 133230348 133230611 -12358677 + AluSx SINE Alu 1 308 -4 253 148 33 0 chr10 133230612 133230673 -12358615 + MER63C DNA MER1_type 107 169 -761 1866 158 175 79 chr10 133230829 133231413 -12357875 + MER63C DNA MER1_type 251 890 -40 7597 225 37 35 chr10 133231423 133234083 -12355205 + L1PBb LINE L1 424 3152 -3051 185 0 0 39 chr10 133234083 133234109 -12355179 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 7597 225 37 35 chr10 133234109 133235054 -12354234 + L1PBb LINE L1 3152 4093 -2110 2273 128 34 3 chr10 133235054 133235412 -12353876 + L1PB4 LINE L1 5783 6151 -5 413 228 63 31 chr10 133235869 133235996 -12353292 + L2 LINE L2 3183 3313 0 253 288 0 0 chr10 133236207 133236273 -12353015 + MLT1I LTR MaLR 344 409 0 315 0 0 0 chr10 133236624 133236659 -12352629 + (TG)n Simple_repeat Simple_repeat 2 36 0 2032 133 3 3 chr10 133236883 133237183 -12352105 + AluSx SINE Alu 1 300 -12 503 257 104 7 chr10 133237199 133237343 -12351945 + MIR SINE MIR 44 201 -61 1725 182 75 22 chr10 133237389 133237744 -12351544 - MLT1A2 LTR MaLR 0 457 1 901 286 113 24 chr10 133237744 133238159 -12351129 - MLT1J LTR MaLR -51 460 9 210 308 0 0 chr10 133238159 133238211 -12351077 + MIR SINE MIR 209 260 -2 2299 97 3 0 chr10 133238955 133239264 -12350024 - AluSq SINE Alu -3 310 1 1741 167 68 102 chr10 133239296 133239684 -12349604 + Charlie1b DNA MER1_type 1 367 -2394 2303 75 3 0 chr10 133239684 133239978 -12349310 - AluSp SINE Alu -18 295 1 1741 167 68 102 chr10 133239978 133240129 -12349159 + Charlie1b DNA MER1_type 367 522 -1 973 216 17 39 chr10 133240247 133240478 -12348810 - MER58B DNA MER1_type -1 340 115 236 160 0 40 chr10 133240809 133240859 -12348429 - L2 LINE L2 -3 3310 3263 2363 218 3 4 chr10 133241010 133241603 -12347685 + MER82 DNA MER2_type 7 652 -1 621 235 77 116 chr10 133241744 133242122 -12347166 + L1ME4a LINE L1 5754 6116 -5 318 319 18 0 chr10 133242958 133243071 -12346217 + MIR SINE MIR 31 145 -63 219 234 21 0 chr10 133245280 133245327 -12343961 - L2 LINE L2 -9 3263 3216 549 146 10 19 chr10 133245944 133246047 -12343241 + MER5A DNA MER1_type 4 105 -84 477 0 0 0 chr10 133246587 133246640 -12342648 + (TG)n Simple_repeat Simple_repeat 2 54 0 578 275 0 17 chr10 133246965 133247143 -12342145 + MER5B DNA MER1_type 1 175 -3 1840 178 164 5 chr10 133247484 133247910 -12341378 - MLT1D LTR MaLR 0 505 12 235 234 16 31 chr10 133247921 133247985 -12341303 - MIR SINE MIR -80 182 120 277 352 119 6 chr10 133248279 133248455 -12340833 + L2 LINE L2 3118 3313 0 661 268 62 62 chr10 133248602 133248942 -12340346 + MLT1I LTR MaLR 70 409 0 364 276 11 0 chr10 133248994 133249081 -12340207 + MIR SINE MIR 43 130 -78 1755 177 113 93 chr10 133249472 133249968 -12339320 + L1MB7 LINE L1 5661 6166 -18 21 0 0 0 chr10 133250200 133250221 -12339067 + AT_rich Low_complexity Low_complexity 1 21 0 2128 122 0 0 chr10 133250223 133250517 -12338771 + AluSx SINE Alu 1 294 -18 217 152 0 65 chr10 133252126 133252172 -12337116 + CT-rich Low_complexity Low_complexity 2 44 0 407 314 35 17 chr10 133252308 133252480 -12336808 + MER5A DNA MER1_type 15 189 0 4505 169 18 10 chr10 133252565 133253382 -12335906 - L1MB8 LINE L1 -6 6172 5349 323 267 237 0 chr10 133253390 133253521 -12335767 + MIR SINE MIR 91 252 -10 1572 287 84 26 chr10 133253541 133254148 -12335140 + MLT2F LTR ERVL 10 651 -12 2057 198 85 13 chr10 133254320 133254791 -12334497 - MLT1D LTR MaLR 0 505 1 597 264 27 7 chr10 133254792 133254940 -12334348 + LTR33 LTR ERVL 26 176 -345 598 197 82 7 chr10 133255015 133255162 -12334126 + LTR33 LTR ERVL 294 451 -70 2482 168 48 7 chr10 133255170 133255824 -12333464 + L1M4 LINE L1 5009 5700 -474 244 396 108 22 chr10 133256824 133256963 -12332325 - L2 LINE L2 -1 3271 3121 215 321 60 30 chr10 133257183 133257351 -12331937 + L2 LINE L2 2886 3058 -214 2381 74 0 0 chr10 133257542 133257840 -12331448 + AluSc SINE Alu 1 298 -11 426 350 107 0 chr10 133259632 133259809 -12329479 + MIR SINE MIR 67 262 0 27 0 0 0 chr10 133260286 133260313 -12328975 + GC_rich Low_complexity Low_complexity 1 27 0 290 326 99 11 chr10 133261175 133261356 -12327932 - MER113 DNA MER1_type? -89 432 236 644 231 44 108 chr10 133261454 133261770 -12327518 - L1ME3A LINE L1 -68 6102 5807 254 209 0 15 chr10 133261774 133261841 -12327447 - MER113 DNA MER1_type? -296 225 160 481 299 30 24 chr10 133262772 133262939 -12326349 + MIR SINE MIR 47 214 -48 481 262 19 0 chr10 133263459 133263566 -12325722 - MER81 DNA DNA -5 109 1 306 0 0 0 chr10 133263705 133263739 -12325549 + (TTA)n Simple_repeat Simple_repeat 2 35 0 806 198 64 5 chr10 133263739 133263928 -12325360 + MER110 LTR ERV1 9 249 -242 201 197 73 4 chr10 133264089 133264143 -12325145 - MIR SINE MIR -61 147 97 1778 227 29 23 chr10 133264184 133264481 -12324807 + MER74A LTR ERVL 76 379 -179 189 0 0 0 chr10 133264481 133264502 -12324786 + (CCCCCT)n Simple_repeat Simple_repeat 5 25 0 1778 227 29 23 chr10 133264502 133264684 -12324604 + MER74A LTR ERVL 379 558 0 2326 106 77 6 chr10 133265055 133265395 -12323893 - THE1B LTR MaLR 0 364 1 2016 183 0 51 chr10 133265396 133265789 -12323499 - MLT1B LTR MaLR -17 373 1 23 33 0 0 chr10 133266128 133266158 -12323130 + AT_rich Low_complexity Low_complexity 1 30 0 391 197 66 0 chr10 133266433 133266509 -12322779 + MLT1A2 LTR MaLR 3 83 -291 1075 99 128 0 chr10 133266509 133266681 -12322607 - AluSq SINE Alu -9 304 111 254 296 24 32 chr10 133267796 133267921 -12321367 - L1M4c LINE L1 -5033 1351 1228 2354 136 27 11 chr10 133268254 133268622 -12320666 - THE1C LTR MaLR 0 375 2 1711 143 11 0 chr10 133268635 133268901 -12320387 + AluSx SINE Alu 28 296 -16 932 211 14 24 chr10 133268915 133269123 -12320165 + MLT1A2 LTR MaLR 169 374 0 216 354 57 6 chr10 133269576 133269751 -12319537 - L2 LINE L2 -574 2740 2557 1812 212 39 68 chr10 133269801 133269859 -12319429 - MLT1D LTR MaLR -6 499 441 1647 124 0 124 chr10 133269859 133270215 -12319073 + AluSx SINE Alu 1 312 0 1812 212 39 68 chr10 133270215 133270670 -12318618 - MLT1D LTR MaLR -64 441 1 2632 173 41 12 chr10 133271198 133271720 -12317568 + LTR27 LTR ERV1 3 552 -17 1776 225 94 25 chr10 133271824 133272444 -12316844 + LTR27-int LTR ERV1 109 568 -2520 4339 164 33 31 chr10 133272561 133274220 -12315068 + LTR27-int LTR ERV1 601 4912 -305 1167 136 152 5 chr10 133274220 133274418 -12314870 + AluSg1 SINE Alu 1 227 -82 16690 155 32 28 chr10 133274420 133275709 -12313579 + LTR27-int LTR ERV1 1210 2492 -4504 2785 14 0 0 chr10 133275709 133276005 -12313283 + AluYa5 SINE Alu 9 304 -7 16690 155 32 28 chr10 133276005 133278218 -12311070 + LTR27-int LTR ERV1 2492 6996 0 2660 164 23 17 chr10 133278219 133278734 -12310554 + LTR27 LTR ERV1 3 488 -13 270 266 142 75 chr10 133279439 133279706 -12309582 - L2 LINE L2 -52 3220 2936 378 42 0 0 chr10 133279851 133279899 -12309389 + (TG)n Simple_repeat Simple_repeat 1 48 0 408 275 14 28 chr10 133280073 133280215 -12309073 + MIR SINE MIR 123 262 0 339 299 65 33 chr10 133280807 133280991 -12308297 + MIR SINE MIR 2 191 -71 337 332 37 21 chr10 133283750 133283937 -12305351 - MIR SINE MIR -19 243 54 410 289 8 8 chr10 133284482 133284610 -12304678 - MER5A DNA MER1_type -61 128 1 274 345 34 14 chr10 133284785 133284933 -12304355 - MIR SINE MIR -80 182 32 210 182 23 0 chr10 133285040 133285084 -12304204 + (TGAA)n Simple_repeat Simple_repeat 4 48 0 347 208 75 19 chr10 133285334 133285440 -12303848 - L2 LINE L2 -19 3294 3183 2289 128 34 3 chr10 133285897 133286255 -12303033 - L1PB4 LINE L1 -5 6151 5783 7653 224 37 35 chr10 133286255 133287196 -12302092 - L1PBb LINE L1 -2110 4093 3155 185 0 0 39 chr10 133287196 133287222 -12302066 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 7653 224 37 35 chr10 133287222 133289885 -12299403 - L1PBb LINE L1 -3048 3155 424 1837 183 150 58 chr10 133289895 133290481 -12298807 - MER63C DNA MER1_type -40 890 251 262 148 33 0 chr10 133290637 133290698 -12298590 - MER63C DNA MER1_type -761 169 107 826 125 0 0 chr10 133290699 133290819 -12298469 - AluSx SINE Alu -4 308 189 1107 112 0 0 chr10 133290819 133290962 -12298326 - AluSx SINE Alu -170 143 1 324 315 39 6 chr10 133291809 133291987 -12297301 - MIR SINE MIR -27 235 52 259 289 53 38 chr10 133292818 133293081 -12296207 - L1M4 LINE L1 -1751 4395 4129 308 304 138 50 chr10 133293097 133293480 -12295808 - L1M4 LINE L1 -2349 3797 3351 4433 25 8 0 chr10 133293480 133293993 -12295295 - L1PA4 LINE L1 -1 6154 5638 308 304 138 50 chr10 133293993 133294151 -12295137 - L1M4 LINE L1 -2795 3351 3208 398 83 17 0 chr10 133294749 133294809 -12294479 + THE1B-int LTR MaLR 1519 1579 -1 2330 132 22 25 chr10 133294809 133295174 -12294114 + THE1B LTR MaLR 1 364 0 1301 198 45 7 chr10 133295176 133295464 -12293824 - L1PA15-16 LINE L1 -4966 1883 1585 205 355 0 19 chr10 133295668 133295775 -12293513 + CT-rich Low_complexity Low_complexity 4 108 0 187 200 22 0 chr10 133296378 133296423 -12292865 + L2 LINE L2 3268 3313 0 440 257 37 73 chr10 133296694 133296966 -12292322 + MLT1G1 LTR MaLR 14 275 -320 395 185 0 0 chr10 133297454 133297535 -12291753 + L1MA8 LINE L1 6190 6270 -21 24 32 0 0 chr10 133297584 133297615 -12291673 + AT_rich Low_complexity Low_complexity 1 31 0 807 193 46 61 chr10 133297622 133297819 -12291469 + MER119 DNA MER1_type 389 582 -1 1313 195 126 15 chr10 133297970 133298304 -12290984 + MSTA LTR MaLR 1 371 -57 230 232 10 61 chr10 133298305 133298404 -12290884 + AluS SINE Alu 1 94 -208 191 294 12 12 chr10 133298782 133298867 -12290421 - L3 LINE CR1 -418 1159 1075 385 268 115 6 chr10 133299447 133299604 -12289684 + MIR SINE MIR 46 219 -43 783 191 64 6 chr10 133300770 133300943 -12288345 + MER5A DNA MER1_type 2 184 -5 1094 252 72 56 chr10 133301114 133301419 -12287869 + L1ME4a LINE L1 5402 5701 -420 1570 168 71 0 chr10 133301419 133301728 -12287560 - L1MC2 LINE L1 -9 6335 6005 1094 252 72 56 chr10 133301728 133301944 -12287344 + L1ME4a LINE L1 5701 5936 -185 2313 71 4 0 chr10 133301944 133302256 -12287032 - AluY SINE Alu 0 313 1 1094 252 72 56 chr10 133302256 133302303 -12286985 + L1ME4a LINE L1 5936 5981 -140 416 121 169 12 chr10 133302304 133302387 -12286901 + AluSg1 SINE Alu 2 97 -212 967 274 95 32 chr10 133303311 133303712 -12285576 - MLT1K LTR MaLR -8 580 155 6162 185 33 22 chr10 133305141 133305191 -12284097 + L1MB7 LINE L1 3954 4002 -2182 2046 173 40 3 chr10 133305191 133305543 -12283745 + MLT1A1 LTR MaLR 1 365 0 6162 185 33 22 chr10 133305543 133307689 -12281599 + L1MB7 LINE L1 4002 6174 -10 2184 126 7 0 chr10 133307826 133308119 -12281169 + AluSx SINE Alu 3 297 -15 1303 165 20 125 chr10 133308267 133308667 -12280621 - MLT1D LTR MaLR -138 367 10 530 309 45 5 chr10 133309916 133310117 -12279171 - MIR SINE MIR -33 229 21 737 275 32 5 chr10 133310374 133310592 -12278696 - HERV16 LTR ERVL -2929 2067 1844 1884 310 60 38 chr10 133310712 133312043 -12277245 - HERV16 LTR ERVL -3461 1535 147 882 278 78 22 chr10 133312167 133312538 -12276750 - LTR16A LTR ERVL -47 403 12 617 238 72 72 chr10 133312587 133312687 -12276601 - L1MEc LINE L1 -4305 2091 1992 2141 105 0 21 chr10 133312687 133313012 -12276276 - AluY SINE Alu 0 319 1 617 238 72 72 chr10 133313012 133313229 -12276059 - L1MEc LINE L1 -4403 1993 1773 183 382 38 38 chr10 133313996 133314127 -12275161 + MIR SINE MIR 18 148 -60 2349 119 0 0 chr10 133314211 133314522 -12274766 + AluSx SINE Alu 1 311 -1 2434 99 0 0 chr10 133316497 133316809 -12272479 + AluSx SINE Alu 1 312 0 2138 223 84 71 chr10 133318238 133318995 -12270293 + LTR41 LTR ERVL 1 767 -6 1747 159 19 99 chr10 133319154 133319570 -12269718 - MLT1B LTR MaLR -4 386 4 199 340 113 0 chr10 133319651 133319757 -12269531 + MIR SINE MIR 29 146 -62 646 269 70 5 chr10 133320384 133320585 -12268703 - MIR SINE MIR -13 249 36 355 340 47 11 chr10 133321841 133322032 -12267256 - L2 LINE L2 -253 3060 2863 23 0 0 0 chr10 133323140 133323163 -12266125 + AT_rich Low_complexity Low_complexity 1 23 0 346 278 99 31 chr10 133324326 133324488 -12264800 - MIR SINE MIR -2 260 88 2113 166 83 64 chr10 133324929 133325320 -12263968 + MLT2B1 LTR ERVL 1 383 -137 2210 114 44 33 chr10 133325320 133325680 -12263608 - THE1B LTR MaLR 0 364 1 2113 166 83 64 chr10 133325680 133325743 -12263545 + MLT2B1 LTR ERVL 383 467 -53 288 53 0 0 chr10 133325743 133325781 -12263507 + (CA)n Simple_repeat Simple_repeat 2 39 0 2113 166 83 64 chr10 133325781 133325796 -12263492 + MLT2B1 LTR ERVL 467 480 -40 274 168 42 11 chr10 133325805 133325900 -12263388 + (TATG)n Simple_repeat Simple_repeat 2 99 0 300 124 86 0 chr10 133325975 133326080 -12263208 + (TA)n Simple_repeat Simple_repeat 1 114 0 268 317 102 8 chr10 133326302 133326428 -12262860 - MIR SINE MIR -67 141 19 327 216 27 126 chr10 133326777 133326888 -12262400 + L1MC4 LINE L1 6604 6703 -1339 318 203 17 0 chr10 133326952 133327011 -12262277 - MLT2B1 LTR ERVL -158 362 303 25 31 0 0 chr10 133327420 133327452 -12261836 + AT_rich Low_complexity Low_complexity 1 32 0 519 208 112 22 chr10 133327459 133327637 -12261651 + L1MD3 LINE L1 7789 7982 -13 1015 200 13 44 chr10 133327906 133328131 -12261157 - MER20 DNA MER1_type -1 218 1 2172 99 6 22 chr10 133328180 133328494 -12260794 + AluSg SINE Alu 1 309 -1 2031 122 3 0 chr10 133328595 133328889 -12260399 - AluSg SINE Alu -14 296 2 1034 228 59 8 chr10 133330355 133330592 -12258696 - MIR SINE MIR 0 262 14 403 288 120 21 chr10 133330882 133331115 -12258173 + MLT1H LTR MaLR 37 292 -257 282 318 95 16 chr10 133331175 133331301 -12257987 + MLT1H LTR MaLR 401 536 -13 287 253 146 82 chr10 133331990 133332223 -12257065 + L1MC4a LINE L1 5401 5648 -2160 42 48 0 0 chr10 133332223 133332286 -12257002 + AT_rich Low_complexity Low_complexity 1 63 0 598 293 102 11 chr10 133332295 133332561 -12256727 + L1MC4a LINE L1 5634 5923 -1885 27 0 0 0 chr10 133332775 133332802 -12256486 + AT_rich Low_complexity Low_complexity 1 27 0 204 321 57 28 chr10 133333041 133333147 -12256141 - L2 LINE L2 -8 3264 3156 187 279 228 0 chr10 133333180 133333259 -12256029 + L2 LINE L2 3204 3300 -13 288 0 0 0 chr10 133333260 133333292 -12255996 + (TGAA)n Simple_repeat Simple_repeat 2 33 0 438 304 101 7 chr10 133333508 133333656 -12255632 + MIR SINE MIR 20 181 -81 213 294 82 35 chr10 133333667 133333752 -12255536 - L2 LINE L2 0 3313 3225 210 320 144 26 chr10 133334772 133334925 -12254363 + L2 LINE L2 2882 3052 -220 896 146 15 0 chr10 133335049 133335179 -12254109 + Tigger7 DNA MER2_type 2 133 -572 1701 107 0 0 chr10 133335179 133335413 -12253875 - AluSq SINE Alu -79 234 1 1325 170 97 21 chr10 133335416 133335704 -12253584 + Tigger7 DNA MER2_type 2170 2479 -8 252 254 0 17 chr10 133335740 133335799 -12253489 + L2 LINE L2 3255 3312 -1 390 305 35 25 chr10 133336905 133337100 -12252188 + MIR SINE MIR 14 208 -54 6105 121 114 117 chr10 133337120 133338967 -12250321 + pTR5 LTR ERV1 375 2438 0 585 302 71 51 chr10 133340084 133340379 -12248909 + MLT1K LTR MaLR 45 345 -243 366 285 28 26 chr10 133341597 133341769 -12247519 - L1MC5 LINE L1 -89 7953 7662 694 270 42 38 chr10 133342497 133342786 -12246502 + L1ME4a LINE L1 5608 5897 -224 21 0 0 31 chr10 133342966 133342977 -12246311 + AT_rich Low_complexity Low_complexity 1 11 -20 1531 195 13 31 chr10 133342977 133343295 -12245993 - AluJo SINE Alu 0 312 1 21 0 0 31 chr10 133343295 133343315 -12245973 + AT_rich Low_complexity Low_complexity 11 31 0 216 254 0 18 chr10 133343336 133343391 -12245897 + GA-rich Low_complexity Low_complexity 4 57 0 188 132 0 26 chr10 133343398 133343436 -12245852 + (GAAAA)n Simple_repeat Simple_repeat 5 41 0 862 10 0 0 chr10 133343664 133343761 -12245527 + L1PA2 LINE L1 6055 6151 -4 1027 274 92 57 chr10 133344611 133344883 -12244405 - L2 LINE L2 -3 3310 3049 2058 121 0 3 chr10 133344883 133345181 -12244107 - AluSx SINE Alu -15 297 1 1027 274 92 57 chr10 133345181 133345315 -12243973 - L2 LINE L2 -264 3049 2921 553 244 83 61 chr10 133345315 133345544 -12243744 - MER106A DNA MER1_type 0 236 3 1027 274 92 57 chr10 133345544 133345748 -12243540 - L2 LINE L2 -392 2921 2653 287 229 0 12 chr10 133345824 133345907 -12243381 + CT-rich Low_complexity Low_complexity 1 82 0 190 319 169 42 chr10 133346507 133346720 -12242568 - L2 LINE L2 -478 2836 2597 216 135 0 0 chr10 133347992 133348029 -12241259 + (CACTA)n Simple_repeat Simple_repeat 5 41 0 193 302 95 0 chr10 133348092 133348155 -12241133 + L2 LINE L2 3225 3293 -20 182 284 40 27 chr10 133348690 133348764 -12240524 + L2 LINE L2 3193 3267 -5 386 287 0 41 chr10 133350901 133351023 -12238265 - MIR3 SINE MIR -27 181 65 482 254 188 11 chr10 133351041 133351222 -12238066 + MIR SINE MIR 41 253 -9 371 292 62 15 chr10 133351326 133351456 -12237832 + MIR SINE MIR 48 183 -79 546 269 44 47 chr10 133352822 133353077 -12236211 - MIR SINE MIR 0 262 3 287 320 0 19 chr10 133353538 133353641 -12235647 + MIR SINE MIR 59 159 -103 222 150 0 0 chr10 133354205 133354245 -12235043 + (CA)n Simple_repeat Simple_repeat 1 40 0 256 256 12 47 chr10 133355153 133355239 -12234049 + MIR SINE MIR 48 130 -132 226 200 89 89 chr10 133355478 133355568 -12233720 - MIR SINE MIR -70 192 103 573 322 34 10 chr10 133355902 133356125 -12233163 + MIR SINE MIR 16 244 -18 649 242 6 42 chr10 133356275 133356440 -12232848 - MIR SINE MIR -25 237 79 839 206 7 5 chr10 133357794 133358218 -12231070 + (CA)n Simple_repeat Simple_repeat 1 425 0 528 292 96 24 chr10 133358590 133358799 -12230489 + L2 LINE L2 3088 3311 -2 287 321 62 27 chr10 133358953 133359065 -12230223 + MIR SINE MIR 128 243 -19 184 277 0 21 chr10 133359096 133359143 -12230145 - MIR SINE MIR -108 154 109 35 0 0 0 chr10 133359291 133359326 -12229962 + AT_rich Low_complexity Low_complexity 1 35 0 2329 88 0 0 chr10 133360498 133360805 -12228483 + AluSc SINE Alu 1 307 -2 318 252 49 49 chr10 133360925 133361048 -12228240 + MER5A DNA MER1_type 61 183 -6 1700 117 132 0 chr10 133361185 133361442 -12227846 + AluSg SINE Alu 1 291 -9 250 386 0 0 chr10 133361702 133361790 -12227498 + MER5A DNA MER1_type 1 88 -101 427 242 10 0 chr10 133362332 133362431 -12226857 - MIR SINE MIR -13 249 150 415 267 109 24 chr10 133362433 133362598 -12226690 - MIR SINE MIR -34 228 50 764 239 158 81 chr10 133363527 133363958 -12225330 - MLT1H LTR MaLR -13 536 73 201 39 0 0 chr10 133364596 133364622 -12224666 + (TTTTG)n Simple_repeat Simple_repeat 1 26 0 935 43 0 17 chr10 133364636 133364753 -12224535 - L1PA8 LINE L1 -7 6165 6051 703 69 0 0 chr10 133364754 133364841 -12224447 - L1P3 LINE L1 -343 5811 5725 254 364 34 10 chr10 133365276 133365482 -12223806 - MLT1H-int LTR MaLR -870 501 291 21 36 0 0 chr10 133365576 133365604 -12223684 + AT_rich Low_complexity Low_complexity 1 28 0 336 345 63 0 chr10 133365929 133366071 -12223217 - L2 LINE L2 -583 2731 2581 1956 208 13 74 chr10 133366166 133366718 -12222570 + MLT2B1 LTR ERVL 1 518 -2 227 173 0 39 chr10 133366734 133366786 -12222502 - MLT1H LTR MaLR -8 587 538 847 202 56 30 chr10 133366787 133366985 -12222303 - MER58A DNA MER1_type -3 221 19 1030 246 94 41 chr10 133366987 133367381 -12221907 - MLT1H LTR MaLR -46 503 89 22 35 0 0 chr10 133367920 133367949 -12221339 + AT_rich Low_complexity Low_complexity 1 29 0 31 44 0 0 chr10 133368122 133368167 -12221121 + AT_rich Low_complexity Low_complexity 1 45 0 687 309 32 16 chr10 133368887 133369133 -12220155 - MIR SINE MIR 0 262 13 201 306 47 35 chr10 133369173 133369258 -12220030 + L2 LINE L2 3138 3223 -49 301 244 33 56 chr10 133370457 133370547 -12218741 - L1MC4 LINE L1 -1338 6704 6617 181 324 14 97 chr10 133371207 133371352 -12217936 - MIR SINE MIR -82 180 48 734 283 132 5 chr10 133371593 133371812 -12217476 - MLT1I LTR MaLR -156 253 7 21 57 0 0 chr10 133372460 133372495 -12216793 + AT_rich Low_complexity Low_complexity 1 35 0 545 272 63 6 chr10 133372901 133373059 -12216229 + MIR SINE MIR 79 245 -17 218 306 14 14 chr10 133373245 133373317 -12215971 + MIR SINE MIR 57 128 -80 2201 103 0 6 chr10 133373390 133373701 -12215587 + AluSc SINE Alu 1 309 0 231 260 156 0 chr10 133373902 133373979 -12215309 + L2 LINE L2 3174 3262 -10 282 343 61 56 chr10 133374165 133374378 -12214910 + MIR SINE MIR 10 223 -39 272 27 27 0 chr10 133375276 133375313 -12213975 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 2302 105 3 3 chr10 133376428 133376734 -12212554 - AluY SINE Alu -5 306 1 22 80 0 0 chr10 133377380 133377430 -12211858 + AT_rich Low_complexity Low_complexity 1 50 0 1390 232 104 44 chr10 133377881 133378294 -12210994 + MLT2B1 LTR ERVL 1 438 -82 1225 136 109 122 chr10 133378277 133378571 -12210717 - MER7A DNA MER2_type -57 289 2 * 253 65 0 0 chr10 133378596 133378642 -12210646 + LTR66 LTR ERVL 394 439 -171 279 136 0 68 chr10 133378643 133378702 -12210586 + MLT2B1 LTR ERVL 464 518 -2 953 302 68 16 chr10 133378736 133379047 -12210241 - MLT1K LTR MaLR -248 340 14 264 270 120 10 chr10 133380904 133381004 -12208284 - L2 LINE L2 0 3313 3203 207 0 0 0 chr10 133382502 133382525 -12206763 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 264 30 0 0 chr10 133382734 133382767 -12206521 + (CA)n Simple_repeat Simple_repeat 2 34 0 23 33 0 0 chr10 133384658 133384688 -12204600 + AT_rich Low_complexity Low_complexity 1 30 0 1026 278 112 39 chr10 133384954 133385491 -12203797 + MLT1K LTR MaLR 11 586 -2 698 287 45 82 chr10 133385837 133386372 -12202916 + L1ME LINE L1 6 544 -5526 481 282 30 23 chr10 133386478 133386753 -12202535 + L1ME LINE L1 521 746 -5324 6311 101 11 8 chr10 133386754 133387797 -12201491 + L1PA15 LINE L1 5122 6165 0 1506 161 109 13 chr10 133387836 133388147 -12201141 - MER2 DNA MER2_type -2 342 2 225 343 36 14 chr10 133388333 133388473 -12200815 - MIR3 SINE MIR -43 165 23 23 0 0 0 chr10 133389060 133389083 -12200205 + AT_rich Low_complexity Low_complexity 1 23 0 636 251 56 10 chr10 133389648 133389843 -12199445 - MIR SINE MIR -24 238 35 223 323 21 11 chr10 133390227 133390320 -12198968 + MIR3 SINE MIR 112 205 -3 503 316 127 39 chr10 133390366 133390806 -12198482 + L1MC4a LINE L1 5443 5921 -1887 217 255 38 0 chr10 133391154 133391260 -12198028 + (CATATA)n Simple_repeat Simple_repeat 1 110 0 277 299 93 25 chr10 133392857 133393061 -12196227 - L2 LINE L2 -217 3055 2838 282 333 44 22 chr10 133393135 133393270 -12196018 - MIR SINE MIR -113 149 12 256 231 0 15 chr10 133393821 133393886 -12195402 - L2 LINE L2 0 3313 3250 477 297 151 20 chr10 133393887 133394284 -12195004 + L1M4 LINE L1 4131 4579 -1567 21 0 0 0 chr10 133394348 133394369 -12194919 + AT_rich Low_complexity Low_complexity 1 21 0 224 247 26 0 chr10 133394472 133394626 -12194662 + (TA)n Simple_repeat Simple_repeat 2 159 0 249 274 96 30 chr10 133395003 133395138 -12194150 + L1P LINE L1 5286 5429 -725 379 191 19 20 chr10 133395148 133395249 -12194039 - MLT1D LTR MaLR 0 530 449 299 233 85 78 chr10 133395250 133395433 -12193855 + L1ME4a LINE L1 5849 6036 -85 2415 89 3 0 chr10 133395433 133395736 -12193552 - AluSc SINE Alu -5 304 1 299 233 85 78 chr10 133395736 133395823 -12193465 + L1ME4a LINE L1 6036 6121 0 206 308 0 0 chr10 133396964 133397016 -12192272 + L2 LINE L2 3205 3256 -16 186 143 0 0 chr10 133398088 133398123 -12191165 + (CA)n Simple_repeat Simple_repeat 1 35 0 1106 192 5 27 chr10 133398147 133398371 -12190917 - MER20 DNA MER1_type 0 219 1 236 324 138 21 chr10 133398901 133399046 -12190242 + L2 LINE L2 3075 3236 -36 425 280 57 31 chr10 133399056 133399249 -12190039 - MIR SINE MIR 0 262 65 516 270 74 16 chr10 133400188 133400377 -12188911 - LTR16C LTR ERVL -5 486 287 648 207 7 43 chr10 133400385 133400525 -12188763 - MER63A DNA MER1_type -25 185 51 235 269 60 60 chr10 133400600 133400767 -12188521 - LTR16C LTR ERVL -222 269 103 399 333 48 9 chr10 133402613 133402844 -12186444 - LTR16C LTR ERVL -248 243 4 311 233 129 52 chr10 133404672 133404865 -12184423 + MLT1K LTR MaLR 378 585 -3 493 325 28 49 chr10 133405027 133405353 -12183935 + L2 LINE L2 2435 2753 -561 1301 221 91 23 chr10 133405451 133405845 -12183443 - MLT1D LTR MaLR -64 441 21 318 340 127 21 chr10 133405863 133406154 -12183134 + L2 LINE L2 2914 3235 -78 574 211 106 84 chr10 133409969 133410196 -12179092 + MIR SINE MIR 26 257 -5 939 234 88 0 chr10 133410395 133410587 -12178701 + MER58A DNA MER1_type 16 224 0 220 358 0 9 chr10 133411549 133411658 -12177630 + MIR SINE MIR 58 165 -97 740 296 115 24 chr10 133412216 133412766 -12176522 - L2 LINE L2 -1 3312 2720 11413 190 33 39 chr10 133413013 133413376 -12175912 - L1PA12 LINE L1 -2761 4823 4459 298 145 97 32 chr10 133413376 133413438 -12175850 - THE1C LTR MaLR -309 66 1 11376 93 11 28 chr10 133413438 133415045 -12174243 - THE1B-int LTR MaLR 0 1580 1 2418 131 22 6 chr10 133415045 133415403 -12173885 - THE1B LTR MaLR 0 364 1 11413 190 33 39 chr10 133415403 133417682 -12171606 - L1PA12 LINE L1 -3122 4462 1344 279 281 180 8 chr10 133417743 133417871 -12171417 + L2 LINE L2 3163 3312 -1 186 171 29 0 chr10 133419729 133419764 -12169524 + MIR SINE MIR 2 37 -225 5531 174 49 78 chr10 133419886 133420019 -12169269 - L1 LINE L1 -1620 4526 4391 337 65 22 0 chr10 133420019 133420065 -12169223 + MSTB1 LTR MaLR 1 47 -385 5531 174 49 78 chr10 133420065 133420601 -12168687 - L1 LINE L1 -1755 4391 3841 2765 139 5 16 chr10 133420601 133421032 -12168256 + MSTC LTR MaLR 3 428 0 5531 174 49 78 chr10 133421032 133421704 -12167584 - L1 LINE L1 -2305 3841 3179 593 260 150 4 chr10 133421755 133421999 -12167289 + L2 LINE L2 2772 3043 -270 472 262 59 38 chr10 133422137 133422485 -12166803 - MLT1J2 LTR MaLR -59 391 1 26 30 0 0 chr10 133422630 133422663 -12166625 + AT_rich Low_complexity Low_complexity 1 33 0 224 250 0 29 chr10 133422688 133422792 -12166496 + A-rich Low_complexity Low_complexity 1 101 0 24 0 0 0 chr10 133422974 133422998 -12166290 + AT_rich Low_complexity Low_complexity 1 24 0 1427 213 100 128 chr10 133423915 133424586 -12164702 - MLT1E LTR MaLR -2 591 1 360 282 25 12 chr10 133425624 133425836 -12163452 - L3 LINE CR1 -73 1504 1249 315 265 160 65 chr10 133425892 133426186 -12163102 - LTR16A1 LTR ERVL 0 457 136 34 0 0 0 chr10 133426227 133426261 -12163027 + AT_rich Low_complexity Low_complexity 1 34 0 338 344 51 10 chr10 133426397 133426592 -12162696 + HAL1 LINE L1 556 758 -1749 255 31 0 0 chr10 133426606 133426638 -12162650 + (CA)n Simple_repeat Simple_repeat 2 33 0 586 264 173 43 chr10 133426641 133427035 -12162253 + HAL1 LINE L1 822 1266 -1241 2170 239 94 60 chr10 133427055 133427860 -12161428 + HAL1 LINE L1 1496 2341 -166 1488 212 100 92 chr10 133427860 133427957 -12161331 - MLT1D LTR MaLR 0 505 410 2437 94 0 0 chr10 133427957 133428265 -12161023 + AluSq SINE Alu 1 308 -5 1488 212 100 92 chr10 133428265 133428668 -12160620 - MLT1D LTR MaLR -95 410 1 2170 239 94 60 chr10 133428668 133428839 -12160449 + HAL1 LINE L1 2341 2505 -2 267 114 0 0 chr10 133429587 133429631 -12159657 + (TG)n Simple_repeat Simple_repeat 1 44 0 416 308 22 28 chr10 133429753 133429918 -12159370 - MIR SINE MIR -62 146 2 264 292 28 0 chr10 133430535 133430607 -12158681 + MLT1G1 LTR MaLR 465 538 -57 2737 215 63 120 chr10 133430614 133432002 -12157286 + L2 LINE L2 1797 3108 -205 185 371 14 0 chr10 133432160 133432230 -12157058 + MIR3 SINE MIR 88 158 -50 544 303 141 33 chr10 133432357 133432783 -12156505 + MLT1K LTR MaLR 1 472 -4 191 315 68 0 chr10 133433253 133433326 -12155962 + L3 LINE CR1 1059 1136 -441 337 213 32 43 chr10 133433423 133433517 -12155771 - MIR3 SINE MIR -17 191 99 808 232 58 21 chr10 133433558 133433726 -12155562 - MER112 DNA MER1_type -4 252 71 315 49 0 0 chr10 133433726 133433767 -12155521 + (CA)n Simple_repeat Simple_repeat 2 42 0 808 232 58 21 chr10 133433767 133433839 -12155449 - MER112 DNA MER1_type -185 71 3 449 284 93 12 chr10 133433932 133434094 -12155194 - MER5B DNA MER1_type 0 178 4 3608 222 11 25 chr10 133434347 133435008 -12154280 + L1M4 LINE L1 3640 4288 -1858 1896 151 7 10 chr10 133435008 133435306 -12153982 - AluJb SINE Alu -15 297 1 3608 222 11 25 chr10 133435306 133435517 -12153771 + L1M4 LINE L1 4288 4500 -1646 473 183 21 11 chr10 133435707 133435800 -12153488 + MLT1A2 LTR MaLR 4 97 -277 1593 170 44 26 chr10 133435815 133436273 -12153015 + MER34 LTR ERV1 27 541 -1 1198 215 33 33 chr10 133436277 133436551 -12152737 + MLT1A2 LTR MaLR 101 374 0 381 271 33 41 chr10 133436574 133436696 -12152592 + L2 LINE L2 3187 3307 -6 220 333 157 0 chr10 133436771 133436879 -12152409 + MIR SINE MIR 120 244 -18 205 200 0 0 chr10 133436896 133436936 -12152352 + (TTA)n Simple_repeat Simple_repeat 2 41 0 196 262 0 0 chr10 133436936 133436978 -12152310 + L2 LINE L2 3230 3271 -1 2267 107 10 0 chr10 133437012 133437311 -12151977 + AluSx SINE Alu 1 302 -10 339 392 18 31 chr10 133438656 133438883 -12150405 + MIR SINE MIR 1 224 -38 432 300 99 21 chr10 133439731 133439964 -12149324 - MIR SINE MIR -10 252 2 287 290 56 37 chr10 133440149 133440256 -12149032 - MIR3 SINE MIR -9 199 91 222 219 0 0 chr10 133440268 133440309 -12148979 - L2 LINE L2 -8 3305 3265 217 302 138 35 chr10 133441320 133441436 -12147852 - L2 LINE L2 0 3313 3186 571 322 7 44 chr10 133441553 133441823 -12147465 + MIR SINE MIR 3 262 0 233 213 0 21 chr10 133441870 133441917 -12147371 + GA-rich Low_complexity Low_complexity 3 48 0 464 220 8 0 chr10 133441924 133442042 -12147246 + G-rich Low_complexity Low_complexity 1 119 0 3815 253 21 36 chr10 133442716 133443800 -12145488 - MSTD-int LTR MaLR -666 1069 2 926 182 58 115 chr10 133443804 133444221 -12145067 - MSTD LTR MaLR -2 394 2 955 189 7 0 chr10 133444748 133444901 -12144387 - MSTD LTR MaLR 0 396 243 1290 156 170 14 chr10 133445160 133445436 -12143852 + MLT1F LTR MaLR 224 542 0 486 278 59 24 chr10 133445437 133445606 -12143682 - L2 LINE L2 -518 2796 2622 2412 92 0 0 chr10 133445660 133445963 -12143325 - AluSc SINE Alu -4 305 3 869 293 45 53 chr10 133445967 133446017 -12143271 - MLT1L LTR MaLR -77 538 489 1647 137 117 23 chr10 133446017 133446324 -12142964 - MER44D DNA MER2_type -3 606 1 869 293 45 53 chr10 133446324 133446669 -12142619 - MLT1L LTR MaLR -126 489 146 1099 219 17 13 chr10 133446806 133447043 -12142245 + MSTD LTR MaLR 1 238 -158 219 270 22 65 chr10 133447659 133447844 -12141444 + GA-rich Low_complexity Low_complexity 4 180 0 279 79 0 0 chr10 133448169 133448207 -12141081 + (GGGAA)n Simple_repeat Simple_repeat 2 39 0 288 300 229 31 chr10 133448662 133448885 -12140403 - L2 LINE L2 -7 3306 3040 268 193 207 114 chr10 133449228 133449311 -12139977 + L2 LINE L2 2606 2680 -634 1284 129 20 15 chr10 133449311 133449513 -12139775 + L1PA16 LINE L1 5962 6164 -2 268 193 207 114 chr10 133449513 133449569 -12139719 + L2 LINE L2 2680 2758 -556 280 138 17 17 chr10 133449689 133449747 -12139541 - Charlie7 DNA MER1_type -47 2565 2508 316 157 191 0 chr10 133449750 133449839 -12139449 - Charlie7 DNA MER1_type -2457 155 50 30 0 0 0 chr10 133450135 133450165 -12139123 + AT_rich Low_complexity Low_complexity 1 30 0 1774 133 59 7 chr10 133450173 133450287 -12139001 + AluSx SINE Alu 1 108 -204 360 0 0 0 chr10 133450287 133450327 -12138961 + (CA)n Simple_repeat Simple_repeat 1 40 0 1774 133 59 7 chr10 133450327 133450483 -12138805 + AluSx SINE Alu 108 285 -27 34 24 0 0 chr10 133450483 133450524 -12138764 + AT_rich Low_complexity Low_complexity 1 41 0 231 133 0 0 chr10 133450917 133450962 -12138326 + (CA)n Simple_repeat Simple_repeat 1 45 0 1928 148 22 25 chr10 133451012 133451330 -12137958 + MER7A DNA MER2_type 1 315 -31 1027 140 0 12 chr10 133451634 133451798 -12137490 - AluSg/x SINE Alu -5 305 144 2068 161 0 0 chr10 133452250 133452560 -12136728 - AluSx SINE Alu -2 310 1 2260 116 0 0 chr10 133452995 133453298 -12135990 - AluSx SINE Alu -9 303 1 580 207 40 56 chr10 133453402 133453600 -12135688 - L1MC5 LINE L1 -31 7930 7736 1540 153 24 51 chr10 133453600 133453895 -12135393 + AluJo SINE Alu 1 287 -25 432 158 35 0 chr10 133453975 133454146 -12135142 + (TA)n Simple_repeat Simple_repeat 2 178 0 27 49 0 0 chr10 133454151 133454192 -12135096 + AT_rich Low_complexity Low_complexity 1 41 0 513 161 18 0 chr10 133454196 133454364 -12134924 + (TA)n Simple_repeat Simple_repeat 1 171 0 1724 180 52 85 chr10 133454387 133454987 -12134301 - L1MC5 LINE L1 -209 7752 7173 1438 250 74 74 chr10 133455090 133456855 -12132433 - L1MC5 LINE L1 -833 7128 5385 2466 94 0 0 chr10 133456855 133457164 -12132124 + AluSx SINE Alu 1 309 -3 1438 250 74 74 chr10 133457164 133457236 -12132052 - L1MC5 LINE L1 -2576 5385 5314 609 312 51 62 chr10 133457339 133457984 -12131304 - L1MC5 LINE L1 -864 5282 4645 214 204 0 23 chr10 133458075 133458119 -12131169 + L2 LINE L2 3213 3255 -17 21 71 0 0 chr10 133458259 133458301 -12130987 + AT_rich Low_complexity Low_complexity 1 42 0 404 233 67 25 chr10 133461674 133461794 -12127494 - MIR SINE MIR -70 192 68 180 0 0 0 chr10 133462674 133462694 -12126594 + (A)n Simple_repeat Simple_repeat 1 20 0 355 215 13 25 chr10 133463122 133463201 -12126087 + MER5B DNA MER1_type 29 106 -72 190 236 8 154 chr10 133463123 133463246 -12126042 - MER5B DNA MER1_type -29 149 45 * 318 318 68 8 chr10 133463226 133463358 -12125930 + MIR SINE MIR 28 168 -40 2174 83 73 3 chr10 133465860 133466149 -12123139 - AluY SINE Alu -2 309 1 338 298 168 27 chr10 133466642 133466934 -12122354 + MARNA DNA Mariner 181 513 -73 2254 102 7 0 chr10 133467377 133467671 -12121617 + AluSc SINE Alu 2 297 -12 1440 119 0 0 chr10 133468035 133468229 -12121059 - AluSc SINE Alu -8 301 108 2317 92 0 0 chr10 133468835 133469130 -12120158 + AluSg SINE Alu 1 295 -15 237 336 216 17 chr10 133470040 133470156 -12119132 + L2 LINE L2 3119 3257 -15 1869 164 0 4 chr10 133470503 133470784 -12118504 - AluJo SINE Alu -32 280 1 2299 105 7 0 chr10 133472617 133472921 -12116367 + AluSg SINE Alu 1 306 -4 202 270 169 11 chr10 133472923 133473012 -12116276 + MIR SINE MIR 43 145 -63 2322 96 0 0 chr10 133474108 133474401 -12114887 + AluSc SINE Alu 1 293 -16 226 140 0 120 chr10 133475681 133475731 -12113557 + Alu SINE Alu 126 169 -134 1389 164 44 0 chr10 133476213 133476439 -12112849 - MER46A DNA MER2_type 0 236 1 263 303 10 30 chr10 133476816 133476915 -12112373 + GA-rich Low_complexity Low_complexity 2 98 0 185 224 75 30 chr10 133477356 133477423 -12111865 + L2 LINE L2 3180 3249 -64 29 0 0 0 chr10 133477697 133477726 -12111562 + AT_rich Low_complexity Low_complexity 1 29 0 516 290 78 66 chr10 133477738 133478072 -12111216 + L2 LINE L2 2806 3143 -170 1328 165 40 40 chr10 133478092 133478364 -12110924 - AluJo SINE Alu -1 311 40 2158 108 0 3 chr10 133478725 133479011 -12110277 - AluSq SINE Alu -16 297 13 228 245 0 0 chr10 133479628 133479677 -12109611 - MER91B DNA MER1_type -141 49 1 222 339 151 33 chr10 133479694 133479998 -12109290 + L2 LINE L2 2932 3271 -1 441 259 30 111 chr10 133480163 133480460 -12108828 - L2 LINE L2 0 3313 3041 2187 115 17 0 chr10 133480873 133481168 -12108120 + AluSx SINE Alu 1 300 -12 2626 122 63 5 chr10 133482471 133482898 -12106390 - Tigger2 DNA MER2_type 0 2718 2267 499 119 0 0 chr10 133482882 133482949 -12106339 - Tigger2 DNA MER2_type -2649 69 3 * 180 200 0 0 chr10 133483106 133483146 -12106142 + (CATATA)n Simple_repeat Simple_repeat 4 43 0 238 150 50 67 chr10 133483288 133483348 -12105940 - L2 LINE L2 -2 3270 3212 362 247 264 6 chr10 133483356 133483534 -12105754 - MIR SINE MIR -22 240 17 328 239 125 118 chr10 133483701 133483990 -12105298 - L3 LINE CR1 -340 1237 947 1698 109 13 0 chr10 133484409 133484639 -12104649 + AluSp SINE Alu 64 296 -17 893 306 52 3 chr10 133484984 133485275 -12104013 - MLT1K LTR MaLR -162 426 122 2147 116 3 3 chr10 133485849 133486150 -12103138 - AluSc SINE Alu -8 301 1 337 226 38 3 chr10 133486177 133486264 -12103024 + MLT2E LTR ERVL 37 131 -530 272 239 149 22 chr10 133487276 133487410 -12101878 + MIR SINE MIR 8 158 -104 497 143 77 0 chr10 133487985 133488076 -12101212 - L1PA11 LINE L1 0 6174 6077 373 238 10 116 chr10 133488280 133488468 -12100820 - MER106B DNA MER1_type -2 1057 851 2306 110 0 0 chr10 133488468 133488768 -12100520 + AluSx SINE Alu 1 300 -12 373 238 10 116 chr10 133488768 133488838 -12100450 - MER106B DNA MER1_type -208 851 1 186 309 41 10 chr10 133489258 133489355 -12099933 - L2 LINE L2 0 3272 3173 808 297 122 0 chr10 133489475 133489771 -12099517 - LTR16B LTR ERVL -132 332 1 182 234 109 60 chr10 133490719 133490903 -12098385 + L2 LINE L2 2899 3091 -181 2040 208 21 7 chr10 133491857 133492293 -12096995 + MLT1C LTR MaLR 6 405 -23 379 277 20 0 chr10 133496048 133496149 -12093139 + MIR SINE MIR 84 186 -76 1077 220 4 34 chr10 133496310 133496546 -12092742 + MER8 DNA MER2_type 1 229 -10 230 345 34 25 chr10 133496666 133496785 -12092503 + L2 LINE L2 3153 3272 0 957 175 23 17 chr10 133497179 133497356 -12091932 - MER45A DNA AcHobo 0 178 1 507 246 78 0 chr10 133497828 133497970 -12091318 - MLT1K LTR MaLR -2 586 434 1804 125 79 0 chr10 133498311 133498590 -12090698 + MER1B DNA MER1_type 39 339 0 3454 226 92 21 chr10 133499582 133500566 -12088722 + L1MC4a LINE L1 6753 7805 -3 1607 187 0 56 chr10 133501138 133501459 -12087829 - AluJo SINE Alu -9 303 1 237 262 0 0 chr10 133502015 133502076 -12087212 - MIR SINE MIR -4 258 198 30 45 0 0 chr10 133502127 133502171 -12087117 + AT_rich Low_complexity Low_complexity 1 44 0 195 42 0 0 chr10 133502432 133502456 -12086832 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 7588 34 0 3 chr10 133502456 133503524 -12085764 - L1PA5 LINE L1 -9 6145 5077 268 218 36 0 chr10 133503671 133503726 -12085562 + L2 LINE L2 3248 3304 -9 1526 228 23 30 chr10 133503814 133504209 -12085079 - MSTD LTR MaLR 0 396 5 3298 229 37 15 chr10 133504209 133504923 -12084365 - MSTD-int LTR MaLR -1 1734 971 187 333 37 37 chr10 133506714 133506822 -12082466 + MER5B DNA MER1_type 29 136 -42 239 264 164 50 chr10 133510175 133510334 -12078954 + MER20B DNA MER1_type 56 232 -551 2730 50 0 0 chr10 133510352 133510675 -12078613 + L1PA5 LINE L1 5684 6006 -148 230 283 0 0 chr10 133510675 133510728 -12078560 + C-rich Low_complexity Low_complexity 5 57 0 2208 109 0 37 chr10 133511250 133511571 -12077717 - AluSc SINE Alu 0 309 1 1694 175 3 26 chr10 133512105 133512414 -12076874 - AluJb SINE Alu -10 302 1 2168 129 0 13 chr10 133512417 133512727 -12076561 - AluSg SINE Alu -4 306 1 1249 187 18 0 chr10 133514032 133514251 -12075037 - MER58A DNA MER1_type 0 224 2 701 254 119 5 chr10 133516489 133516690 -12072598 + MER58A DNA MER1_type 1 224 0 297 281 134 39 chr10 133516773 133517132 -12072156 + L1ME4a LINE L1 5725 6117 -4 2056 87 0 22 chr10 133517170 133517445 -12071843 + AluSx SINE Alu 36 304 -8 222 37 0 0 chr10 133517590 133517617 -12071671 + (A)n Simple_repeat Simple_repeat 1 27 0 267 79 0 0 chr10 133517828 133517866 -12071422 + (CAA)n Simple_repeat Simple_repeat 2 39 0 2277 23 4 0 chr10 133519040 133519306 -12069982 - L1PA4 LINE L1 -3 6152 5886 3395 18 0 0 chr10 133519307 133519688 -12069600 + L1P2 LINE L1 5355 5735 -420 446 190 20 0 chr10 133520004 133520104 -12069184 + GA-rich Low_complexity Low_complexity 2 103 0 321 292 20 0 chr10 133520104 133520215 -12069073 - HsTC2 DNA Tc2 -63 1835 2 319 304 170 17 chr10 133520999 133521229 -12068059 - L3 LINE CR1 -502 1075 811 342 305 17 8 chr10 133521304 133521422 -12067866 + L2 LINE L2 3195 3313 0 194 407 0 0 chr10 133521425 133521511 -12067777 - L3 LINE CR1 -764 813 728 1089 231 17 94 chr10 133521545 133521651 -12067637 + MER58B DNA MER1_type 1 114 -2306 1594 201 3 3 chr10 133521651 133521934 -12067354 - AluJo SINE Alu -28 284 2 1089 231 17 94 chr10 133521934 133522187 -12067101 + MER58B DNA MER1_type 114 332 -9 247 286 32 48 chr10 133522205 133522331 -12066957 - L3 LINE CR1 -904 673 550 2487 92 0 0 chr10 133523948 133524253 -12065035 + AluSc SINE Alu 1 305 -4 227 277 60 0 chr10 133524946 133525029 -12064259 + L1MEc LINE L1 294 381 -6015 440 283 87 48 chr10 133525443 133525743 -12063545 + L1MEc LINE L1 838 1061 -5052 2077 146 0 0 chr10 133525743 133526037 -12063251 + AluSx SINE Alu 17 310 -2 440 283 87 48 chr10 133526037 133526266 -12063022 + L1MEc LINE L1 1061 1280 -4833 1449 60 0 11 chr10 133526470 133526655 -12062633 + L1PA5 LINE L1 5972 6154 0 1097 234 8 12 chr10 133526666 133526923 -12062365 + MER20B DNA MER1_type 261 516 -267 584 209 76 33 chr10 133526978 133527189 -12062099 + MER20B DNA MER1_type 476 695 -88 1928 127 51 54 chr10 133527191 133527522 -12061766 + MER1B DNA MER1_type 10 339 0 237 279 58 12 chr10 133527529 133527615 -12061673 + MER20B DNA MER1_type 693 782 -1 283 328 127 15 chr10 133528341 133528609 -12060679 - L2 LINE L2 -135 3178 2881 651 269 88 6 chr10 133528721 133528903 -12060385 + MLT1F1 LTR MaLR 1 197 -370 898 29 0 0 chr10 133529048 133529152 -12060136 + L1P2 LINE L1 5632 5735 -419 386 179 24 0 chr10 133529469 133529553 -12059735 + GA-rich Low_complexity Low_complexity 3 88 0 257 309 24 0 chr10 133529594 133529678 -12059610 - HsTC2 DNA Tc2 -1811 87 2 225 320 32 24 chr10 133530801 133530926 -12058362 - MER5A DNA MER1_type -1 188 63 631 272 109 0 chr10 133533028 133533230 -12056058 - MER58A DNA MER1_type 0 224 1 222 289 133 0 chr10 133533247 133533330 -12055958 + L2 LINE L2 3177 3270 -2 549 137 196 46 chr10 133533481 133533634 -12055654 + MER53 DNA DNA 5 180 -9 27 0 0 0 chr10 133534639 133534666 -12054622 + AT_rich Low_complexity Low_complexity 1 27 0 202 188 109 0 chr10 133535622 133535686 -12053602 + MIR SINE MIR 120 190 -72 2147 118 7 0 chr10 133535793 133536080 -12053208 - AluSx SINE Alu -23 289 1 192 414 0 0 chr10 133538421 133538479 -12050809 + T-rich Low_complexity Low_complexity 1 58 0 208 316 35 0 chr10 133539888 133539945 -12049343 - MIR SINE MIR -115 93 35 702 282 79 22 chr10 133540206 133540433 -12048855 - MIR SINE MIR -21 241 2 2534 63 0 105 chr10 133541163 133541736 -12047552 - L1PA5 LINE L1 -3 6151 5639 1153 181 74 129 chr10 133542186 133542634 -12046654 + LTR45B LTR ERV1 67 489 0 345 313 39 8 chr10 133542806 133542934 -12046354 + MIR SINE MIR 12 143 -119 222 37 0 0 chr10 133543344 133543371 -12045917 + (CA)n Simple_repeat Simple_repeat 1 27 0 679 222 103 32 chr10 133544102 133544354 -12044934 - MER66B LTR ERV1 -145 341 72 513 264 25 12 chr10 133544631 133544794 -12044494 + MIR SINE MIR 2 166 -96 265 267 74 22 chr10 133547058 133547193 -12042095 + L1ME4a LINE L1 5976 6117 -4 2041 166 82 14 chr10 133547318 133547758 -12041530 - Charlie4a DNA MER1_type 0 508 39 380 199 94 88 chr10 133547870 133548041 -12041247 + MER117 DNA MER1_type 2 173 -24 1731 227 60 8 chr10 133548631 133549310 -12039978 - L1ME LINE L1 -430 5734 5022 24 0 0 0 chr10 133549347 133549371 -12039917 + AT_rich Low_complexity Low_complexity 1 24 0 381 346 0 13 chr10 133550082 133550241 -12039047 + MIR SINE MIR 1 157 -105 530 254 161 60 chr10 133550645 133551075 -12038213 + L1ME4a LINE L1 5582 6054 -67 1877 172 21 38 chr10 133551601 133551973 -12037315 + MLT2D LTR ERVL 1 366 -48 4752 163 59 13 chr10 133552020 133552930 -12036358 + Tigger3b DNA MER2_type 2 953 -278 831 194 33 59 chr10 133552932 133553205 -12036083 - AluSx SINE Alu -17 295 30 260 196 0 0 chr10 133554612 133554658 -12034630 - MLT2D LTR ERVL 0 414 369 184 164 0 36 chr10 133554721 133554776 -12034512 + (TATATG)n Simple_repeat Simple_repeat 2 54 0 1364 143 117 0 chr10 133554778 133555009 -12034279 - Tigger3(Golem) DNA MER2_type -2 3027 2770 276 200 100 14 chr10 133555392 133555462 -12033826 + L1ME4a LINE L1 5975 6050 -71 260 292 117 25 chr10 133555658 133555778 -12033510 - L2 LINE L2 -928 2386 2256 291 323 0 16 chr10 133555985 133556109 -12033179 - LTR67 LTR ERVL -9 548 427 21 36 0 0 chr10 133556846 133556874 -12032414 + AT_rich Low_complexity Low_complexity 1 28 0 1986 71 0 16 chr10 133557349 133557602 -12031686 + AluY SINE Alu 30 278 -33 26 0 0 0 chr10 133558114 133558140 -12031148 + AT_rich Low_complexity Low_complexity 1 26 0 794 252 193 31 chr10 133558423 133558713 -12030575 + MLT1C LTR MaLR 168 466 -1 21 0 0 0 chr10 133560091 133560112 -12029176 + AT_rich Low_complexity Low_complexity 1 21 0 316 304 71 58 chr10 133560592 133560832 -12028456 + MIR SINE MIR 20 262 0 213 282 30 38 chr10 133561567 133561698 -12027590 - L2 LINE L2 -17 3296 3167 235 24 95 0 chr10 133562086 133562128 -12027160 + T-rich Low_complexity Low_complexity 1 46 0 351 150 0 0 chr10 133562274 133562334 -12026954 + (TGAA)n Simple_repeat Simple_repeat 3 62 0 374 0 0 21 chr10 133564145 133564192 -12025096 + (CA)n Simple_repeat Simple_repeat 2 47 0 619 246 37 5 chr10 133564228 133564415 -12024873 - MIR SINE MIR -50 212 20 191 284 25 12 chr10 133565082 133565163 -12024125 - MIR SINE MIR -11 251 170 2241 100 0 19 chr10 133566475 133566784 -12022504 + AluSc SINE Alu 1 303 -6 307 349 47 0 chr10 133566889 133567038 -12022250 + MIR SINE MIR 57 212 -50 248 250 47 0 chr10 133567619 133567683 -12021605 - MARNA DNA Mariner -32 554 488 212 277 48 36 chr10 133567793 133567876 -12021412 + MIR SINE MIR 176 259 -3 304 237 43 11 chr10 133568212 133568305 -12020983 + MLT1J1 LTR MaLR 1 96 -350 306 271 69 101 chr10 133568385 133568573 -12020715 + MLT1J2 LTR MaLR 269 450 0 226 221 26 26 chr10 133568942 133569019 -12020269 - MIR SINE MIR -73 135 59 640 172 70 0 chr10 133570870 133570998 -12018290 - Charlie1 DNA MER1_type 0 2761 2625 2357 240 78 35 chr10 133571022 133571076 -12018212 - L1ME1 LINE L1 -5 6161 6111 1830 136 0 4 chr10 133571076 133571348 -12017940 + AluSx SINE Alu 35 305 -7 2357 240 78 35 chr10 133571348 133572143 -12017145 - L1ME1 LINE L1 -55 6111 5276 246 62 0 0 chr10 133572157 133572189 -12017099 + (TA)n Simple_repeat Simple_repeat 1 32 0 954 175 39 35 chr10 133572198 133572394 -12016894 - L1ME1 LINE L1 -875 5271 5072 1836 174 43 6 chr10 133572394 133572744 -12016544 + MLT1A1 LTR MaLR 1 363 -2 954 175 39 35 chr10 133572744 133572833 -12016455 - L1ME1 LINE L1 -1074 5072 4985 1022 118 0 34 chr10 133572835 133572966 -12016322 - L1MD1 LINE L1 -1 6241 6115 2036 129 7 0 chr10 133572966 133573273 -12016015 + AluSc SINE Alu 1 309 0 1022 118 0 34 chr10 133573273 133573318 -12015970 - L1MD1 LINE L1 -127 6115 6070 844 287 25 15 chr10 133573318 133573712 -12015576 - MER57A LTR ERV1 0 403 6 489 312 107 34 chr10 133573720 133574226 -12015062 - L1ME4a LINE L1 -6 6115 5573 1296 138 60 0 chr10 133574421 133574639 -12014649 + L1MB5 LINE L1 5763 5993 -181 791 183 25 71 chr10 133575357 133575554 -12013734 + MER5A DNA MER1_type 2 189 0 186 270 161 52 chr10 133577448 133577622 -12011666 - MIR3 SINE MIR 0 208 16 191 262 0 0 chr10 133578003 133578045 -12011243 - MIR SINE MIR -3 259 218 2285 88 0 7 chr10 133578138 133578432 -12010856 - AluY SINE Alu -15 296 5 1001 140 28 0 chr10 133578432 133578610 -12010678 - MSTB LTR MaLR -243 183 1 333 246 18 27 chr10 133578610 133578731 -12010557 - L1ME4a LINE L1 -761 5405 5279 239 77 0 26 chr10 133580468 133580507 -12008781 + (TCCC)n Simple_repeat Simple_repeat 2 39 0 2386 98 0 10 chr10 133580590 133580895 -12008393 + AluSx SINE Alu 1 302 -10 294 271 59 0 chr10 133580896 133580981 -12008307 + MIR SINE MIR 167 256 -6 429 216 95 82 chr10 133581292 133581345 -12007943 - L1MB5 LINE L1 -8 6166 6115 1891 133 0 17 chr10 133581345 133581639 -12007649 + AluSc SINE Alu 5 293 -16 429 216 95 82 chr10 133581639 133581817 -12007471 - L1MB5 LINE L1 -59 6115 5932 1577 112 112 0 chr10 133582108 133582180 -12007108 + AluSg SINE Alu 33 96 -214 225 0 0 0 chr10 133582180 133582205 -12007083 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 1577 112 112 0 chr10 133582205 133582364 -12006924 + AluSg SINE Alu 96 290 -20 3708 154 54 14 chr10 133582364 133582401 -12006887 + L1MB5 LINE L1 5432 5466 -708 342 0 0 0 chr10 133582401 133582439 -12006849 + (TAA)n Simple_repeat Simple_repeat 2 39 0 3708 154 54 14 chr10 133582439 133583054 -12006234 + L1MB5 LINE L1 5466 6117 -57 2143 119 0 3 chr10 133583054 133583347 -12005941 - AluY SINE Alu -15 296 5 3708 154 54 14 chr10 133583347 133583400 -12005888 + L1MB5 LINE L1 6117 6166 -8 294 271 59 0 chr10 133583711 133583796 -12005492 - MIR SINE MIR -6 256 167 2195 116 3 10 chr10 133583797 133584099 -12005189 - AluSg SINE Alu -10 300 1 2910 191 45 43 chr10 133584817 133584917 -12004371 - L1MC3 LINE L1 -4 7781 7683 2097 134 7 0 chr10 133584917 133585208 -12004080 - AluSx SINE Alu -19 293 1 2910 191 45 43 chr10 133585208 133585779 -12003509 - L1MC3 LINE L1 -102 7683 7109 2377 137 0 3 chr10 133585787 133586122 -12003166 + MER1B DNA MER1_type 1 334 -5 476 229 35 83 chr10 133586225 133586369 -12002919 - MER20 DNA MER1_type -82 137 1 886 296 53 20 chr10 133586697 133587093 -12002195 - MLT1I LTR MaLR 0 409 1 385 240 69 20 chr10 133588993 133589192 -12000096 + L1MDa LINE L1 2435 2635 -3905 442 159 0 0 chr10 133589246 133589315 -11999973 + Tigger2 DNA MER2_type 1 69 -2649 * 2468 115 34 102 chr10 133589313 133589784 -11999504 + Tigger2 DNA MER2_type 2280 2718 0 512 313 43 30 chr10 133589799 133590198 -11999090 + L1MDa LINE L1 2705 3108 -3432 2219 107 7 7 chr10 133590398 133590698 -11998590 - AluSc SINE Alu -9 300 1 734 237 23 0 chr10 133590705 133590878 -11998410 + MER115 DNA AcHobo 505 681 -12 183 80 0 0 chr10 133591099 133591124 -11998164 + (CCTA)n Simple_repeat Simple_repeat 1 25 0 204 40 0 0 chr10 133591918 133591943 -11997345 + (TG)n Simple_repeat Simple_repeat 1 25 0 183 353 0 10 chr10 133594602 133594704 -11994584 + L3 LINE CR1 1041 1141 -436 184 191 238 0 chr10 133595109 133595193 -11994095 - L2 LINE L2 -359 2955 2852 182 283 38 0 chr10 133595294 133595347 -11993941 + L3 LINE CR1 1520 1574 -3 494 209 172 0 chr10 133595461 133595595 -11993693 + L1MA10 LINE L1 6175 6331 -3 470 206 103 16 chr10 133596631 133596757 -11992531 + Charlie8 DNA MER1_type 36 172 -2245 325 339 139 0 chr10 133597834 133597999 -11991289 - L2 LINE L2 -337 2977 2790 317 319 42 8 chr10 133598115 133598234 -11991054 + MIR SINE MIR 28 150 -112 449 275 74 37 chr10 133598250 133598439 -11990849 - L2 LINE L2 0 3313 3118 525 266 0 0 chr10 133598493 133598632 -11990656 - MIR SINE MIR -113 149 11 206 346 45 23 chr10 133598967 133599100 -11990188 - MIR SINE MIR -74 188 53 731 331 143 22 chr10 133599816 133600362 -11988926 + L2 LINE L2 2283 2894 -420 2202 99 0 10 chr10 133601166 133601460 -11987828 + AluSx SINE Alu 10 300 -12 2264 88 3 19 chr10 133601461 133601768 -11987520 + AluY SINE Alu 1 302 -9 1082 245 25 11 chr10 133601786 133602072 -11987216 - L1ME1 LINE L1 -6 6160 5871 2378 93 0 7 chr10 133602113 133602413 -11986875 + AluSq SINE Alu 1 298 -15 2558 133 64 0 chr10 133603375 133603766 -11985522 + MSTB LTR MaLR 11 426 0 2096 99 18 0 chr10 133604183 133604456 -11984832 + AluSq SINE Alu 24 301 -12 461 250 18 18 chr10 133605558 133605670 -11983618 - MER81 DNA DNA -1 113 2 465 293 149 6 chr10 133606318 133606492 -11982796 - MIR SINE MIR -51 211 13 194 222 69 28 chr10 133606628 133606700 -11982588 + MIR SINE MIR 176 250 -12 265 336 0 41 chr10 133607154 133607276 -11982012 - MLT2E LTR ERVL -480 148 32 * 332 258 21 32 chr10 133607188 133607281 -11982007 - MLT1J LTR MaLR -327 184 93 212 163 0 20 chr10 133609319 133609368 -11979920 + (TG)n Simple_repeat Simple_repeat 1 48 0 1418 176 52 85 chr10 133609594 133609897 -11979391 - MLT1A2 LTR MaLR 0 374 85 1806 189 64 3 chr10 133609897 133610241 -11979047 + MLT1A1 LTR MaLR 1 365 0 1418 176 52 85 chr10 133610241 133610324 -11978964 - MLT1A2 LTR MaLR -289 85 1 22 35 0 0 chr10 133610347 133610376 -11978912 + AT_rich Low_complexity Low_complexity 1 29 0 233 154 115 0 chr10 133610677 133610729 -11978559 + L1MC5 LINE L1 6645 6702 -1259 302 0 0 26 chr10 133611043 133611082 -11978206 + (CA)n Simple_repeat Simple_repeat 1 38 0 1344 36 36 0 chr10 133612517 133612682 -11976606 + L1PA4 LINE L1 5982 6152 -3 734 204 9 113 chr10 133613157 133613388 -11975900 + MER63A DNA MER1_type 4 210 0 767 264 61 0 chr10 133614798 133615010 -11974278 + LTR40a LTR ERVL 14 238 -281 554 157 29 10 chr10 133615006 133615108 -11974180 + LTR40a LTR ERVL 360 463 -56 * 298 301 11 0 chr10 133615172 133615265 -11974023 - MIR SINE MIR 0 262 169 461 198 36 27 chr10 133615891 133616002 -11973286 - MIR SINE MIR -98 164 53 742 244 72 107 chr10 133616467 133616909 -11972379 + MLT1L LTR MaLR 138 504 -7 653 319 129 36 chr10 133617114 133617563 -11971725 - MLT1K LTR MaLR -63 525 35 1531 156 0 130 chr10 133617662 133618009 -11971279 - AluJo SINE Alu 0 302 1 1549 246 59 62 chr10 133618913 133619506 -11969782 - MLT1E LTR MaLR -2 591 1 1394 210 239 10 chr10 133619522 133619912 -11969376 + MLT2B1 LTR ERVL 1 479 -41 455 150 26 9 chr10 133619912 133620025 -11969263 + (CA)n Simple_repeat Simple_repeat 1 115 0 258 29 114 0 chr10 133620029 133620064 -11969224 + MLT2C1 LTR ERVL 351 389 -8 396 309 24 0 chr10 133620079 133620205 -11969083 - L2 LINE L2 -1 3312 3184 218 271 19 56 chr10 133621359 133621466 -11967822 + MIR SINE MIR 33 135 -127 2424 105 23 8 chr10 133621883 133622234 -11967054 + THE1B LTR MaLR 1 356 -8 888 147 0 169 chr10 133622556 133622787 -11966501 - 7SK RNA RNA 0 193 2 2066 107 38 0 chr10 133623312 133623603 -11965685 + AluSp SINE Alu 1 302 -11 342 319 9 9 chr10 133624029 133624145 -11965143 - MIR SINE MIR -62 146 31 786 113 0 43 chr10 133624146 133624287 -11965001 + MER53 DNA DNA 1 135 -54 857 159 43 0 chr10 133624287 133624425 -11964863 + FRAM SINE Alu 23 166 -10 343 191 59 0 chr10 133624425 133624493 -11964795 - MER53 DNA DNA -117 72 1 1263 231 85 21 chr10 133625644 133626033 -11963255 - MLT1C LTR MaLR 0 467 54 285 289 53 26 chr10 133626221 133626335 -11962953 - L2 LINE L2 -40 3232 3116 181 330 30 10 chr10 133627124 133627224 -11962064 + MER5A DNA MER1_type 54 155 -34 457 167 7 160 chr10 133627246 133627396 -11961892 + MER5B DNA MER1_type 52 178 0 438 192 40 10 chr10 133627419 133627518 -11961770 - MER5A DNA MER1_type -84 105 4 671 164 70 0 chr10 133629000 133629128 -11960160 - Charlie1 DNA MER1_type 0 2761 2625 2463 246 72 25 chr10 133629152 133629206 -11960082 - L1ME1 LINE L1 -5 6161 6111 1892 125 0 4 chr10 133629206 133629478 -11959810 + AluSx SINE Alu 35 305 -7 2463 246 72 25 chr10 133629478 133630269 -11959019 - L1ME1 LINE L1 -55 6111 5276 246 62 0 0 chr10 133630283 133630315 -11958973 + (TA)n Simple_repeat Simple_repeat 1 32 0 952 179 38 34 chr10 133630324 133630520 -11958768 - L1ME1 LINE L1 -875 5271 5072 1836 174 43 6 chr10 133630520 133630870 -11958418 + MLT1A1 LTR MaLR 1 363 -2 952 179 38 34 chr10 133630870 133630964 -11958324 - L1ME1 LINE L1 -1074 5072 4980 4034 165 43 32 chr10 133630961 133631092 -11958196 - L1MD1 LINE L1 -1 6310 6182 2080 129 4 0 chr10 133631092 133631371 -11957917 + AluSc SINE Alu 1 309 0 201 35 35 0 chr10 133631371 133631400 -11957888 + (TAAA)n Simple_repeat Simple_repeat 2 80 0 4034 165 43 32 chr10 133631400 133631444 -11957844 - L1MD1 LINE L1 -129 6182 6140 2562 129 20 0 chr10 133631444 133631839 -11957449 - MER57A LTR ERV1 0 403 1 4034 165 43 32 chr10 133631839 133632472 -11956816 - L1MD1 LINE L1 -171 6140 5491 6403 210 49 47 chr10 133632476 133632902 -11956386 - L1MD1 LINE L1 -1074 5141 4717 6574 37 3 1 chr10 133632902 133633679 -11955609 + L1PA5 LINE L1 5375 6152 -2 6403 210 49 47 chr10 133633679 133634825 -11954463 - L1MD1 LINE L1 -1498 4717 3574 2212 113 0 10 chr10 133634825 133635136 -11954152 + AluSg SINE Alu 1 308 -2 6403 210 49 47 chr10 133635136 133635413 -11953875 - L1MD1 LINE L1 -2641 3574 3285 2421 59 0 3 chr10 133635413 133635701 -11953587 - AluY SINE Alu -24 287 1 6403 210 49 47 chr10 133635701 133635841 -11953447 - L1MD1 LINE L1 -2930 3285 3147 352 238 57 0 chr10 133636004 133636109 -11953179 - L1MD1 LINE L1 -4658 1738 1628 1847 189 35 54 chr10 133636154 133636225 -11953063 - L1MC3 LINE L1 -421 7364 7293 2273 158 62 15 chr10 133636225 133636630 -11952658 + MSTA LTR MaLR 1 424 -4 1847 189 35 54 chr10 133636630 133636930 -11952358 - L1MC3 LINE L1 -492 7293 7000 2274 109 0 3 chr10 133636930 133637232 -11952056 - AluY SINE Alu -10 301 1 1847 189 35 54 chr10 133637232 133637288 -11952000 - L1MC3 LINE L1 -785 7000 6944 * 3253 237 116 30 chr10 133637270 133637693 -11951595 - L1MD1 LINE L1 -4745 1651 1266 210 37 0 0 chr10 133637693 133637720 -11951568 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3253 237 116 30 chr10 133637720 133638162 -11951126 - L1MD1 LINE L1 -5130 1266 864 2285 104 0 7 chr10 133638162 133638471 -11950817 - AluY SINE Alu -4 307 1 3253 237 116 30 chr10 133638471 133638860 -11950428 - L1MD1 LINE L1 -5532 864 287 856 260 70 4 chr10 133639133 133639375 -11949913 - L1MD1 LINE L1 -6094 302 45 297 0 0 0 chr10 133639393 133639426 -11949862 + (CA)n Simple_repeat Simple_repeat 2 34 0 189 107 0 0 chr10 133639429 133639457 -11949831 + (TATATG)n Simple_repeat Simple_repeat 6 33 0 227 152 0 0 chr10 133639457 133639503 -11949785 + LTR66 LTR ERVL 394 439 -171 543 215 0 0 chr10 133639509 133639630 -11949658 + (CATA)n Simple_repeat Simple_repeat 4 124 0 279 367 20 0 chr10 133639815 133639962 -11949326 - MIR SINE MIR 0 262 113 21 36 0 0 chr10 133640104 133640132 -11949156 + AT_rich Low_complexity Low_complexity 1 28 0 2446 98 0 0 chr10 133641207 133641512 -11947776 + AluSx SINE Alu 1 305 -7 234 111 389 0 chr10 133643476 133643530 -11945758 - FRAM/FAM SINE Alu -86 80 6 1980 143 40 34 chr10 133643534 133643885 -11945403 - MLT1A1 LTR MaLR -12 353 1 2155 119 45 0 chr10 133643885 133644221 -11945067 - L1MB3 LINE L1 -255 5928 5578 5984 198 48 92 chr10 133644279 133644524 -11944764 - L1MC4a LINE L1 -5 7803 7549 5772 129 38 6 chr10 133644524 133646566 -11942722 - L1PA15 LINE L1 -2 6163 4079 5984 198 48 92 chr10 133646566 133647830 -11941458 - L1MC4a LINE L1 -259 7549 6397 2584 65 7 0 chr10 133647830 133648138 -11941150 - AluY SINE Alu -1 310 1 5984 198 48 92 chr10 133648138 133648576 -11940712 - L1MC4a LINE L1 -1411 6397 5941 1236 106 57 114 chr10 133648585 133648759 -11940529 + MLT1C LTR MaLR 3 161 -306 2215 109 0 7 chr10 133648759 133649053 -11940235 + AluSq SINE Alu 1 292 -21 1236 106 57 114 chr10 133649053 133649124 -11940164 + MLT1C LTR MaLR 161 234 -233 2301 171 59 7 chr10 133649222 133649660 -11939628 + LOR1b LTR ERV1 1 461 0 1001 160 48 27 chr10 133649660 133649847 -11939441 + MLT1C LTR MaLR 234 424 -43 697 130 0 10 chr10 133649808 133649908 -11939380 + MER1A DNA MER1_type 87 185 -342 * 2591 116 3 0 chr10 133649949 133650302 -11938986 + MER1A DNA MER1_type 176 529 0 228 211 0 0 chr10 133650302 133650340 -11938948 + MLT1B LTR MaLR 335 372 -18 4102 114 128 119 chr10 133650343 133651720 -11937568 - pTR5 LTR ERV1 0 2438 741 2308 257 29 24 chr10 133651726 133652493 -11936795 - L1MC4a LINE L1 -864 5282 5194 255 252 81 90 chr10 133653288 133653399 -11935889 + MER5B DNA MER1_type 46 155 -23 333 308 0 0 chr10 133653459 133653550 -11935738 - MER5A DNA MER1_type -90 99 9 402 21 0 0 chr10 133653685 133653732 -11935556 + (TG)n Simple_repeat Simple_repeat 2 48 0 2223 102 0 11 chr10 133653732 133654016 -11935272 - AluSg SINE Alu -29 281 1 1215 209 164 29 chr10 133656412 133656561 -11932727 - Charlie4a DNA MER1_type -1456 505 377 2188 91 0 24 chr10 133656561 133656857 -11932431 + AluSx SINE Alu 1 289 -23 1215 209 164 29 chr10 133656857 133657152 -11932136 - Charlie4a DNA MER1_type -1584 377 1 1330 207 65 93 chr10 133658493 133658967 -11930321 - MLT1C LTR MaLR -1 466 6 332 311 115 25 chr10 133658993 133659228 -11930060 + MIR SINE MIR 2 257 -5 261 83 0 0 chr10 133659538 133659574 -11929714 + (CA)n Simple_repeat Simple_repeat 1 36 0 442 260 83 18 chr10 133659782 133659951 -11929337 + MIR SINE MIR 63 242 -20 1917 103 0 37 chr10 133660442 133660715 -11928573 + AluSq SINE Alu 36 298 -15 2283 106 0 3 chr10 133660715 133661018 -11928270 + AluSg SINE Alu 1 302 -8 255 216 26 86 chr10 133661276 133661392 -11927896 - L1ME LINE L1 -303 5863 5755 1197 129 4 103 chr10 133661738 133661970 -11927318 + AluJb SINE Alu 86 294 -18 2300 92 0 7 chr10 133662778 133663073 -11926215 - AluSg SINE Alu -17 293 1 1196 168 0 24 chr10 133663567 133663776 -11925512 - MER20 DNA MER1_type -15 204 1 774 19 37 0 chr10 133664055 133664162 -11925126 + (TTTC)n Simple_repeat Simple_repeat 4 114 0 207 69 0 0 chr10 133664558 133664587 -11924701 + (TG)n Simple_repeat Simple_repeat 2 30 0 970 210 6 0 chr10 133665828 133666004 -11923284 - MER45A DNA AcHobo 0 178 2 2245 124 0 10 chr10 133666554 133666868 -11922420 - AluSx SINE Alu -1 311 1 370 280 72 8 chr10 133666884 133667009 -11922279 - MIR SINE MIR -109 153 21 1589 75 47 0 chr10 133667081 133667294 -11921994 - LTR12 LTR ERV1 0 714 492 285 252 47 0 chr10 133667296 133667403 -11921885 - LTR30 LTR ERV1 -67 655 544 4069 132 79 27 chr10 133667403 133668311 -11920977 - pTR5 LTR ERV1 -413 2025 743 208 221 198 12 chr10 133668605 133668691 -11920597 + MIR3 SINE MIR 93 194 -14 339 269 8 42 chr10 133668931 133669050 -11920238 + L3 LINE CR1 1263 1377 -200 255 93 0 0 chr10 133669155 133669198 -11920090 + (T)n Simple_repeat Simple_repeat 1 43 0 2108 140 48 31 chr10 133669334 133669692 -11919596 - THE1B LTR MaLR 0 364 1 467 270 58 11 chr10 133670587 133670761 -11918527 + MIR SINE MIR 8 189 -73 2201 115 3 0 chr10 133670870 133671158 -11918130 - AluSx SINE Alu -23 289 1 2173 112 10 3 chr10 133672177 133672471 -11916817 - AluSx SINE Alu -16 296 1 2816 16 0 0 chr10 133672567 133672873 -11916415 + AluY SINE Alu 1 306 -5 2236 108 20 3 chr10 133673310 133673615 -11915673 - AluSx SINE Alu -2 310 1 241 205 13 13 chr10 133674492 133674530 -11914758 + T-rich Low_complexity Low_complexity 1 38 -40 1018 134 87 0 chr10 133674530 133674702 -11914586 + L1PA10 LINE L1 5982 6168 0 241 205 13 13 chr10 133674702 133674741 -11914547 + T-rich Low_complexity Low_complexity 37 78 0 530 202 9 0 chr10 133675576 133675685 -11913603 - MIR SINE MIR -45 217 108 3602 135 2 13 chr10 133676889 133677422 -11911866 - MER1A DNA MER1_type 0 527 1 24 0 0 0 chr10 133677601 133677625 -11911663 + AT_rich Low_complexity Low_complexity 1 24 0 2056 148 7 0 chr10 133677962 133678272 -11911016 - AluSq SINE Alu -1 312 1 1663 243 26 56 chr10 133678358 133678898 -11910390 + MLT1F LTR MaLR 19 542 0 846 294 70 31 chr10 133678983 133679443 -11909845 + MER115 DNA AcHobo 2 509 -184 2184 97 10 3 chr10 133679443 133679733 -11909555 - AluSc SINE Alu -17 292 1 846 294 70 31 chr10 133679733 133679913 -11909375 + MER115 DNA AcHobo 509 681 -12 183 80 0 0 chr10 133680134 133680159 -11909129 + (CCTA)n Simple_repeat Simple_repeat 1 25 0 204 40 0 0 chr10 133680951 133680976 -11908312 + (TG)n Simple_repeat Simple_repeat 1 25 0 543 286 165 70 chr10 133682380 133682415 -11906873 - L2 LINE L2 0 3313 3283 1961 146 98 15 chr10 133682415 133682751 -11906537 - THE1B LTR MaLR 0 364 1 543 286 165 70 chr10 133682751 133683169 -11906119 - L2 LINE L2 -30 3283 2817 414 0 0 0 chr10 133684020 133684066 -11905222 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 2018 98 11 0 chr10 133684069 133684346 -11904942 - AluSg SINE Alu -30 280 1 1497 126 122 15 chr10 133684369 133684639 -11904649 - AluSg1 SINE Alu -10 299 1 583 318 107 26 chr10 133685526 133686033 -11903255 - L1ME4a LINE L1 -1 6120 5573 2267 140 9 52 chr10 133686228 133686650 -11902638 + L1MB5 LINE L1 5763 6166 -8 326 351 79 72 chr10 133687683 133688141 -11901147 - L2 LINE L2 -1 3271 2811 5578 18 0 0 chr10 133688823 133689446 -11899842 + L1PA2 LINE L1 5529 6151 -4 21 0 0 0 chr10 133689476 133689497 -11899791 + AT_rich Low_complexity Low_complexity 1 21 0 189 195 0 0 chr10 133689691 133689732 -11899556 + (TCCA)n Simple_repeat Simple_repeat 3 43 0 513 241 12 93 chr10 133689776 133689938 -11899350 + L2 LINE L2 3160 3308 -5 195 298 125 39 chr10 133689971 133690075 -11899213 - L2 LINE L2 -6 3266 3154 366 324 32 0 chr10 133690113 133690292 -11898996 - MIR SINE MIR 0 262 77 218 278 28 14 chr10 133690342 133690414 -11898874 - L2 LINE L2 -250 3063 2991 1754 103 28 0 chr10 133690508 133690760 -11898528 + AluY SINE Alu 41 299 -12 2057 103 0 0 chr10 133691663 133691944 -11897344 + AluY SINE Alu 1 281 -30 414 0 0 0 chr10 133691947 133691993 -11897295 + (TAAA)n Simple_repeat Simple_repeat 3 48 0 491 280 170 75 chr10 133692844 133693262 -11896026 + L2 LINE L2 2817 3283 -30 1961 146 98 15 chr10 133693262 133693598 -11895690 + THE1B LTR MaLR 1 364 0 491 280 170 75 chr10 133693598 133693633 -11895655 + L2 LINE L2 3283 3313 0 276 244 0 24 chr10 133694784 133694866 -11894422 + (TA)n Simple_repeat Simple_repeat 2 81 0 749 134 42 0 chr10 133695382 133695501 -11893787 - AluSg/x SINE Alu 0 312 189 438 148 0 12 chr10 133695661 133695742 -11893546 - L1M4 LINE L1 -744 5440 5361 258 81 0 0 chr10 133696406 133696443 -11892845 + (T)n Simple_repeat Simple_repeat 1 37 0 369 349 47 0 chr10 133696682 133696831 -11892457 - MIR SINE MIR -50 212 57 1236 100 0 0 chr10 133696934 133697104 -11892184 - AluSg/x SINE Alu -6 306 137 247 275 25 6 chr10 133697591 133697751 -11891537 + CT-rich Low_complexity Low_complexity 2 164 0 318 50 0 0 chr10 133697751 133697791 -11891497 + (CA)n Simple_repeat Simple_repeat 1 40 0 488 256 121 38 chr10 133698293 133698639 -11890649 + L2 LINE L2 2674 3051 -262 287 314 63 67 chr10 133698666 133698921 -11890367 + MLT1H LTR MaLR 24 277 -272 498 249 238 16 chr10 133699068 133699257 -11890031 + L2 LINE L2 3083 3313 0 536 89 18 36 chr10 133699498 133699610 -11889678 + (ATG)n Simple_repeat Simple_repeat 2 111 0 1994 122 7 3 chr10 133700596 133700900 -11888388 + AluSc SINE Alu 1 305 -4 234 176 0 0 chr10 133704484 133704535 -11884753 + A-rich Low_complexity Low_complexity 1 51 0 229 275 110 0 chr10 133704925 133705016 -11884272 + MER69A DNA AcHobo 14 114 -63 677 128 53 38 chr10 133705025 133705158 -11884130 - L1MB7 LINE L1 -28 6156 6022 29 0 0 0 chr10 133706126 133706155 -11883133 + AT_rich Low_complexity Low_complexity 1 29 0 667 285 41 23 chr10 133706747 133706968 -11882320 - MIR SINE MIR -34 228 4 302 235 71 10 chr10 133707165 133707263 -11882025 + L1 LINE L1 4950 5053 -1093 279 244 38 30 chr10 133707455 133707586 -11881702 + L1MC/D LINE L1 5299 5430 -2378 345 290 143 60 chr10 133707619 133707865 -11881423 + L1MC/D LINE L1 5499 5776 -2032 2084 103 3 13 chr10 133707865 133708166 -11881122 + AluSc SINE Alu 1 298 -11 345 290 143 60 chr10 133708166 133708219 -11881069 + L1MC/D LINE L1 5776 5823 -1985 2034 156 16 40 chr10 133708221 133708729 -11880559 + L1MB5 LINE L1 4937 5435 -743 752 159 24 59 chr10 133708729 133708899 -11880389 + L1MB5 LINE L1 6010 6173 -1 251 186 43 43 chr10 133708899 133708969 -11880319 + L1MC/D LINE L1 5818 5887 -1921 1623 182 94 3 chr10 133709453 133709794 -11879494 + MLT1A2 LTR MaLR 1 372 -2 1583 120 112 0 chr10 133709928 133710186 -11879102 + AluSg SINE Alu 1 287 -23 2033 106 0 3 chr10 133710197 133710505 -11878783 + AluSg SINE Alu 1 307 0 264 30 0 0 chr10 133710560 133710593 -11878695 + (CA)n Simple_repeat Simple_repeat 2 34 0 1861 101 83 4 chr10 133710846 133711122 -11878166 + AluSq SINE Alu 5 302 -11 335 297 137 27 chr10 133711227 133711446 -11877842 - MIR SINE MIR -6 256 14 443 289 23 8 chr10 133712694 133712822 -11876466 - MER5A DNA MER1_type -1 188 59 371 343 29 35 chr10 133712695 133712867 -11876421 + MER5A DNA MER1_type 17 187 -2 * 2244 107 7 0 chr10 133712881 133713191 -11876097 - AluSx SINE Alu 0 312 1 264 330 64 18 chr10 133713263 133713372 -11875916 - MIR SINE MIR -128 134 21 2809 149 10 14 chr10 133713495 133713781 -11875507 + L1MB4 LINE L1 5686 5971 -209 2328 78 0 7 chr10 133713781 133714087 -11875201 + AluY SINE Alu 1 304 -7 2809 149 10 14 chr10 133714087 133714291 -11874997 + L1MB4 LINE L1 5971 6174 -6 252 0 0 0 chr10 133714784 133714812 -11874476 + (TTTTC)n Simple_repeat Simple_repeat 2 29 0 2068 121 3 0 chr10 133715124 133715421 -11873867 - AluSx SINE Alu -14 298 1 301 272 191 0 chr10 133717062 133717209 -11872079 - MER96 DNA MER1_type? 0 175 1 1469 166 99 7 chr10 133717896 133718198 -11871090 - L1MC2 LINE L1 -23 6321 5992 1976 115 3 53 chr10 133718526 133718849 -11870439 + AluSx SINE Alu 4 310 -2 2069 191 57 37 chr10 133718907 133719260 -11870028 + Charlie1b DNA MER1_type 1 369 -2392 1575 81 5 0 chr10 133719260 133719470 -11869818 - L1PA7 LINE L1 -7 6147 5937 2069 191 57 37 chr10 133719470 133719629 -11869659 + Charlie1b DNA MER1_type 369 523 0 419 313 111 24 chr10 133719635 133719843 -11869445 + MIR SINE MIR 23 248 -14 250 267 240 18 chr10 133720595 133720812 -11868476 - LTR33 LTR ERVL -7 514 250 1985 148 3 0 chr10 133720828 133721139 -11868149 + AluSx SINE Alu 1 312 0 704 260 142 37 chr10 133721307 133721630 -11867658 - MLT1I LTR MaLR 0 409 53 704 277 17 50 chr10 133721704 133721942 -11867346 - MIR SINE MIR -18 244 15 186 315 43 33 chr10 133722292 133722384 -11866904 - L3 LINE CR1 -256 1321 1229 2101 115 0 16 chr10 133722833 133723147 -11866141 - AluSq SINE Alu -4 309 1 446 337 59 20 chr10 133723241 133723443 -11865845 - MIR SINE MIR -1 261 52 1077 181 231 39 chr10 133723605 133723964 -11865324 + MSTC LTR MaLR 1 428 0 2185 153 75 18 chr10 133724097 133724497 -11864791 - MSTB LTR MaLR -3 423 1 272 220 174 28 chr10 133725000 133725109 -11864179 + L2 LINE L2 3169 3293 -20 316 377 34 7 chr10 133725247 133725393 -11863895 + MIR3 SINE MIR 39 188 -20 246 364 49 22 chr10 133726477 133726661 -11862627 + MIR SINE MIR 59 247 -15 268 277 139 0 chr10 133727567 133727668 -11861620 + MIR SINE MIR 34 148 -60 610 234 94 0 chr10 133727673 133727801 -11861487 - MER5A DNA MER1_type -3 186 47 316 260 146 8 chr10 133727872 133727995 -11861293 - MLT1K LTR MaLR -341 247 108 199 316 89 25 chr10 133728215 133728294 -11860994 - L3b LINE CR1 -24 1559 1476 287 49 24 0 chr10 133728483 133728524 -11860764 + (ATG)n Simple_repeat Simple_repeat 3 44 0 536 332 118 17 chr10 133728846 133729084 -11860204 + MIR SINE MIR 1 262 0 279 348 140 32 chr10 133729100 133729914 -11859374 - L2 LINE L2 -8 3264 2369 198 103 0 0 chr10 133730357 133730386 -11858902 + (GA)n Simple_repeat Simple_repeat 2 30 0 585 295 74 26 chr10 133730961 133731273 -11858015 - MER102a DNA MER1_type 0 330 4 318 298 54 30 chr10 133731368 133731536 -11857752 + MIR3 SINE MIR 31 202 -6 281 260 32 69 chr10 133731771 133731927 -11857361 - MIR SINE MIR -65 143 42 279 271 40 73 chr10 133732662 133732813 -11856475 - MIR SINE MIR -80 182 37 432 97 0 0 chr10 133733050 133733112 -11856176 + (GGGA)n Simple_repeat Simple_repeat 1 62 0 1443 183 59 62 chr10 133733117 133733506 -11855782 + MLT1B LTR MaLR 1 382 -8 1961 126 3 7 chr10 133733787 133734081 -11855207 - AluSx SINE Alu -19 293 1 202 371 22 22 chr10 133734326 133734415 -11854873 + MIR SINE MIR 32 120 -142 1528 208 69 38 chr10 133734675 133735122 -11854166 + MLT1C LTR MaLR 5 465 -2 1672 144 55 81 chr10 133735769 133736151 -11853137 - THE1C LTR MaLR -3 372 1 2205 81 3 3 chr10 133737686 133737983 -11851305 - AluSc SINE Alu -12 297 1 2104 116 0 0 chr10 133737983 133738274 -11851014 - AluSc SINE Alu -18 291 1 192 77 0 0 chr10 133738276 133738302 -11850986 + (T)n Simple_repeat Simple_repeat 1 26 0 751 199 0 0 chr10 133738303 133738434 -11850854 - FLAM_A SINE Alu -1 132 2 1142 235 92 9 chr10 133738567 133738763 -11850525 - MER58B DNA MER1_type -2079 341 163 324 0 0 0 chr10 133738763 133738799 -11850489 + (TA)n Simple_repeat Simple_repeat 2 37 0 2383 61 7 0 chr10 133738799 133739093 -11850195 - AluY SINE Alu -3 308 13 1142 235 92 9 chr10 133739093 133739210 -11850078 - MER58B DNA MER1_type -2256 164 1 2193 94 0 3 chr10 133739933 133740230 -11849058 - AluSx SINE Alu -16 296 1 1915 148 0 6 chr10 133740420 133740731 -11848557 + AluJb SINE Alu 3 311 -1 285 264 82 9 chr10 133740945 133741055 -11848233 - MIR SINE MIR -21 241 124 2286 104 0 0 chr10 133741066 133741373 -11847915 - AluSq SINE Alu -6 307 1 523 123 0 12 chr10 133741571 133741652 -11847636 + AluSp/q SINE Alu 178 257 -56 3277 167 82 2 chr10 133742552 133743176 -11846112 + L1MB7 LINE L1 5447 6120 -64 28 48 0 0 chr10 133746421 133746463 -11842825 + AT_rich Low_complexity Low_complexity 1 42 0 1155 183 40 73 chr10 133747862 133748162 -11841126 + MER58B DNA MER1_type 52 341 0 207 0 0 0 chr10 133748386 133748409 -11840879 + (CA)n Simple_repeat Simple_repeat 2 24 0 2366 70 0 10 chr10 133748814 133749126 -11840162 - AluSg SINE Alu -1 309 1 1918 120 7 0 chr10 133749796 133750072 -11839216 - AluSx SINE Alu -20 292 15 24 0 0 0 chr10 133751249 133751273 -11838015 + AT_rich Low_complexity Low_complexity 1 24 0 252 259 59 0 chr10 133753295 133753380 -11835908 + MIR SINE MIR 111 200 -62 1969 129 0 14 chr10 133753438 133753733 -11835555 - AluSc SINE Alu -18 291 1 2256 115 0 0 chr10 133755248 133755560 -11833728 + AluSx SINE Alu 1 312 0 2274 100 0 3 chr10 133756050 133756361 -11832927 - AluSq SINE Alu -3 310 1 2318 90 3 3 chr10 133757139 133757450 -11831838 - AluSq SINE Alu -2 311 1 265 271 57 0 chr10 133758485 133758555 -11830733 - MIR SINE MIR -72 190 117 2070 107 0 0 chr10 133758575 133758875 -11830413 + AluY SINE Alu 1 300 -11 1886 123 30 17 chr10 133758883 133759183 -11830105 + AluSx SINE Alu 1 304 -8 219 146 0 0 chr10 133759380 133759421 -11829867 + (CA)n Simple_repeat Simple_repeat 2 42 0 191 244 90 39 chr10 133759421 133759499 -11829789 + L2 LINE L2 3154 3235 -37 297 325 17 8 chr10 133760084 133760204 -11829084 + MIR SINE MIR 118 238 -24 465 303 123 52 chr10 133760474 133761052 -11828236 + L2 LINE L2 1985 2603 -711 224 306 56 19 chr10 133761296 133761404 -11827884 + L2 LINE L2 3202 3313 0 444 258 136 60 chr10 133761736 133762105 -11827183 - L1MC4 LINE L1 -149 7893 7497 840 164 0 76 chr10 133762319 133762490 -11826798 + AluJb SINE Alu 101 258 -54 2077 141 0 0 chr10 133763835 133764147 -11825141 + AluSx SINE Alu 1 312 0 475 246 67 39 chr10 133764475 133764654 -11824634 - L1ME3A LINE L1 -342 5828 5645 1091 202 19 5 chr10 133764659 133764872 -11824416 + MER58A DNA MER1_type 3 218 -6 291 343 105 7 chr10 133765681 133765824 -11823464 - MIR3 SINE MIR -4 204 48 186 133 0 0 chr10 133769346 133769376 -11819912 + (TGAG)n Simple_repeat Simple_repeat 1 30 0 288 336 64 0 chr10 133770031 133770156 -11819132 - MIR3 SINE MIR -49 159 27 2169 96 3 3 chr10 133773063 133773364 -11815924 + AluSx SINE Alu 1 301 -11 301 346 23 15 chr10 133773731 133773861 -11815427 + HAL1 LINE L1 2367 2497 -10 644 273 16 75 chr10 133774160 133774293 -11814995 + MIR SINE MIR 20 133 -129 2074 116 0 0 chr10 133774293 133774586 -11814702 + AluSx SINE Alu 1 293 -19 644 273 16 75 chr10 133774586 133774705 -11814583 + MIR SINE MIR 133 257 -5 1171 208 86 34 chr10 133774836 133775163 -11814125 - MER2 DNA MER2_type 0 344 1 1980 110 50 7 chr10 133776470 133776770 -11812518 - AluSq SINE Alu 0 313 1 333 0 0 0 chr10 133777766 133777803 -11811485 + (TTTTA)n Simple_repeat Simple_repeat 3 39 0 1901 133 0 11 chr10 133777806 133778092 -11811196 - AluSx SINE Alu -29 283 1 586 186 0 40 chr10 133779510 133779662 -11809626 - FLAM_A SINE Alu 0 142 20 2110 118 0 13 chr10 133779855 133780161 -11809127 - AluSq SINE Alu -11 302 1 339 244 87 31 chr10 133781005 133781132 -11808156 - MER5A DNA MER1_type -6 183 50 * 419 245 48 48 chr10 133781025 133781172 -11808116 + MER5A DNA MER1_type 43 189 0 5857 60 1 1 chr10 133784882 133785634 -11803654 + L1P LINE L1 4296 5047 -1099 420 212 79 42 chr10 133785757 133785922 -11803366 - Tigger5 DNA MER2_type 0 2323 2153 1529 193 0 99 chr10 133786533 133786957 -11802331 - MLT1B LTR MaLR -4 386 5 180 0 0 0 chr10 133789372 133789392 -11799896 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 231 286 0 36 chr10 133789514 133789598 -11799690 - MIR SINE MIR -50 212 132 1833 164 0 0 chr10 133790559 133790857 -11798431 - AluJb SINE Alu -14 298 1 3853 168 54 46 chr10 133791378 133792184 -11797104 + L1MB1 LINE L1 5305 6120 -74 1677 159 10 23 chr10 133792184 133792485 -11796803 + AluJo SINE Alu 1 297 -15 3853 168 54 46 chr10 133792485 133792561 -11796727 + L1MB1 LINE L1 6120 6194 0 414 0 0 0 chr10 133794016 133794062 -11795226 + (CA)n Simple_repeat Simple_repeat 2 47 0 222 37 0 0 chr10 133795535 133795562 -11793726 + (GA)n Simple_repeat Simple_repeat 1 27 0 698 179 0 7 chr10 133797368 133797508 -11791780 + L1MB4 LINE L1 6036 6174 -6 387 326 58 50 chr10 133798127 133798369 -11790919 + L1MC4a LINE L1 5616 5859 -1949 1134 140 0 6 chr10 133798843 133799021 -11790267 - AluSg/x SINE Alu -14 296 120 2145 110 0 3 chr10 133799023 133799324 -11789964 - AluSx SINE Alu -12 300 1 1943 132 3 0 chr10 133800255 133800542 -11788746 + AluSx SINE Alu 1 288 -24 382 286 58 29 chr10 133801543 133801689 -11787599 - MIR SINE MIR -52 156 34 2001 128 0 3 chr10 133803021 133803310 -11785978 + AluSx SINE Alu 1 288 -24 191 259 19 19 chr10 133803764 133803818 -11785470 + MIR SINE MIR 96 149 -59 2344 82 0 0 chr10 133804006 133804311 -11784977 - AluSg SINE Alu -5 305 1 2152 110 3 0 chr10 133804311 133804609 -11784679 - AluSq SINE Alu -13 300 1 1015 229 14 101 chr10 133804792 133805219 -11784069 + MLT1B LTR MaLR 1 390 0 336 250 38 0 chr10 133805231 133805311 -11783977 - MIR SINE MIR -95 167 85 333 247 0 35 chr10 133809043 133809128 -11780160 - MIR SINE MIR -6 256 175 278 279 81 72 chr10 133810666 133810888 -11778400 - L3 LINE CR1 -368 1209 986 704 318 29 21 chr10 133811532 133811916 -11777372 + L1ME4a LINE L1 5346 5732 -438 359 303 86 48 chr10 133811991 133812281 -11777007 + L1ME4a LINE L1 5777 6077 -44 2225 112 0 0 chr10 133813145 133813449 -11775839 + AluSx SINE Alu 2 305 -7 2939 147 48 14 chr10 133813904 133814082 -11775206 + L1MB4 LINE L1 5601 5771 -409 2204 97 7 0 chr10 133814082 133814380 -11774908 + AluSg SINE Alu 1 300 -10 2939 147 48 14 chr10 133814380 133814759 -11774529 + L1MB4 LINE L1 5771 6177 -3 1694 187 0 0 chr10 133814777 133815076 -11774212 + AluJb SINE Alu 1 299 -13 343 315 158 18 chr10 133815244 133815466 -11773822 + MIR SINE MIR 8 260 -2 25 0 0 0 chr10 133816096 133816121 -11773167 + AT_rich Low_complexity Low_complexity 1 25 0 381 261 52 9 chr10 133816170 133816285 -11773003 - MIR3 SINE MIR -2 206 87 2034 125 3 0 chr10 133816761 133817064 -11772224 + AluSq SINE Alu 1 304 -9 1552 183 23 7 chr10 133817210 133817510 -11771778 - AluJo SINE Alu -7 305 1 306 0 0 0 chr10 133818064 133818098 -11771190 + (T)n Simple_repeat Simple_repeat 1 34 0 1119 254 88 42 chr10 133819290 133819803 -11769485 + MLT1F1 LTR MaLR 15 565 -2 363 267 69 38 chr10 133820098 133820229 -11769059 + L2 LINE L2 3137 3271 -1 2081 102 0 16 chr10 133820757 133821071 -11768217 + AluSc SINE Alu 1 309 0 23 0 0 0 chr10 133821877 133821900 -11767388 + AT_rich Low_complexity Low_complexity 1 23 0 821 286 24 12 chr10 133822151 133822406 -11766882 - MIR SINE MIR -3 259 2 2203 53 0 98 chr10 133824152 133824489 -11764799 - AluY SINE Alu -7 304 1 2072 93 4 0 chr10 133824910 133825190 -11764098 + AluSq SINE Alu 1 281 -32 288 0 0 0 chr10 133825190 133825222 -11764066 + (CAAT)n Simple_repeat Simple_repeat 4 35 0 197 360 13 0 chr10 133825361 133825436 -11763852 + MIR3 SINE MIR 131 206 -2 423 56 0 0 chr10 133825921 133825975 -11763313 + (TGGA)n Simple_repeat Simple_repeat 1 54 0 227 237 119 0 chr10 133825986 133826045 -11763243 + MIR3 SINE MIR 128 193 -15 342 0 0 0 chr10 133826215 133826253 -11763035 + (TC)n Simple_repeat Simple_repeat 2 39 0 413 225 148 39 chr10 133826294 133826476 -11762812 - MIR3 SINE MIR 0 208 7 1555 184 3 0 chr10 133827129 133827412 -11761876 - AluJo SINE Alu -14 298 15 2041 75 68 0 chr10 133828422 133828702 -11760586 - AluSg SINE Alu -8 302 4 207 100 0 0 chr10 133828922 133828952 -11760336 + (A)n Simple_repeat Simple_repeat 1 30 0 2465 58 0 3 chr10 133830151 133830460 -11758828 + AluY SINE Alu 1 308 -3 741 166 0 3 chr10 133830644 133830795 -11758493 - MER5A DNA MER1_type 0 189 1 2341 70 3 3 chr10 133830961 133831263 -11758025 + AluSp SINE Alu 1 302 -11 3992 167 24 5 chr10 133831266 133832099 -11757189 + L1MC1 LINE L1 4890 5749 -584 1963 131 0 16 chr10 133832099 133832404 -11756884 - AluSx SINE Alu -12 300 1 3992 167 24 5 chr10 133832404 133832579 -11756709 + L1MC1 LINE L1 5749 5919 -414 1081 165 26 0 chr10 133832580 133832774 -11756514 + L1MC1 LINE L1 6124 6322 -11 1059 89 0 0 chr10 133832777 133832912 -11756376 + AluSq/x SINE Alu 2 136 -176 2038 121 0 0 chr10 133832912 133833201 -11756087 + AluSg SINE Alu 1 289 -21 589 240 115 42 chr10 133833423 133833615 -11755673 - MIR SINE MIR -37 225 20 598 169 196 48 chr10 133833768 133833957 -11755331 - MER20 DNA MER1_type -2 217 1 555 334 47 33 chr10 133837270 133837506 -11751782 - L2 LINE L2 -6 3307 3065 966 213 46 9 chr10 133837506 133837722 -11751566 + MER58A DNA MER1_type 1 224 0 555 334 47 33 chr10 133837722 133837784 -11751504 - L2 LINE L2 -248 3065 3005 213 311 67 0 chr10 133838013 133838103 -11751185 - MIR3 SINE MIR 0 208 113 2393 93 3 7 chr10 133839028 133839338 -11749950 - AluSg SINE Alu -1 309 1 2390 75 0 23 chr10 133840804 133841112 -11748176 - AluY SINE Alu -10 301 1 1329 86 24 53 chr10 133841112 133841321 -11747967 - AluSg/x SINE Alu -6 304 102 1389 103 0 0 chr10 133841424 133841599 -11747689 - AluSq SINE Alu -138 175 1 530 179 19 0 chr10 133841599 133841705 -11747583 - L1MB3 LINE L1 -41 6142 6035 325 176 88 0 chr10 133841721 133841789 -11747499 - MIR SINE MIR -89 173 100 2213 90 36 0 chr10 133841817 133842096 -11747192 + AluSx SINE Alu 1 289 -23 341 91 0 18 chr10 133842096 133842151 -11747137 + (GGGA)n Simple_repeat Simple_repeat 2 55 0 740 226 25 25 chr10 133842267 133842471 -11746817 - MER58B DNA MER1_type 0 341 138 1202 180 22 71 chr10 133842471 133842794 -11746494 - L1MB3 LINE L1 -10 6173 5867 610 245 6 13 chr10 133842796 133842955 -11746333 - MER58B DNA MER1_type -183 158 1 247 333 11 21 chr10 133843001 133843094 -11746194 - MIR SINE MIR -89 119 28 2284 118 0 0 chr10 133843938 133844244 -11745044 + AluSx SINE Alu 1 306 -6 2238 115 3 10 chr10 133844245 133844557 -11744731 + AluSg SINE Alu 1 310 0 192 309 173 27 chr10 133844677 133844787 -11744501 - L2 LINE L2 -43 3229 3104 399 279 98 36 chr10 133845711 133846438 -11742850 + L1MC4a LINE L1 5325 6103 -18 21 0 0 0 chr10 133846452 133846473 -11742815 + AT_rich Low_complexity Low_complexity 1 21 0 1913 71 3 89 chr10 133846642 133846924 -11742364 - AluSc SINE Alu -51 258 1 23 0 0 0 chr10 133847043 133847066 -11742222 + AT_rich Low_complexity Low_complexity 1 23 0 371 18 35 0 chr10 133847067 133847124 -11742164 + L1MA5 LINE L1 6241 6299 -1 2276 126 0 0 chr10 133847134 133847444 -11741844 + AluSx SINE Alu 2 311 -1 300 257 147 0 chr10 133847478 133847587 -11741701 - HAL1b LINE L1 -29 1319 1195 235 272 62 12 chr10 133847623 133847704 -11741584 + L2 LINE L2 3227 3311 -2 268 260 74 77 chr10 133847713 133847851 -11741437 - HAL1b LINE L1 -212 1136 999 961 195 130 68 chr10 133847851 133847951 -11741337 - MER2 DNA MER2_type 0 344 252 1750 139 37 30 chr10 133847951 133848246 -11741042 + AluJb SINE Alu 1 297 -15 961 195 130 68 chr10 133848246 133848468 -11740820 - MER2 DNA MER2_type -92 252 2 268 260 74 77 chr10 133848468 133848641 -11740647 - HAL1b LINE L1 -349 999 826 1546 120 70 12 chr10 133848678 133848919 -11740369 - AluSx SINE Alu -1 311 57 2180 125 3 0 chr10 133849594 133849898 -11739390 + AluSp SINE Alu 1 305 -8 1562 171 20 49 chr10 133849964 133850268 -11739020 + AluJo SINE Alu 1 295 -17 2062 131 16 7 chr10 133850273 133850579 -11738709 + AluSq SINE Alu 3 311 -2 258 204 36 42 chr10 133851457 133851624 -11737664 + GA-rich Low_complexity Low_complexity 1 166 0 2191 119 0 7 chr10 133852179 133852501 -11736787 + AluSx SINE Alu 1 312 0 2451 81 3 3 chr10 133853505 133853815 -11735473 + AluSx SINE Alu 1 310 -2 21 0 0 0 chr10 133853815 133853836 -11735452 + AT_rich Low_complexity Low_complexity 1 21 0 2289 73 3 7 chr10 133853836 133854143 -11735145 + AluSp SINE Alu 1 306 0 2424 105 0 0 chr10 133854785 133855091 -11734197 + AluSx SINE Alu 1 306 -6 189 0 0 0 chr10 133855091 133855112 -11734176 + (TA)n Simple_repeat Simple_repeat 2 22 0 * 261 0 0 0 chr10 133855111 133855140 -11734148 + (GA)n Simple_repeat Simple_repeat 2 30 0 211 241 0 19 chr10 133855168 133855275 -11734013 + MIR SINE MIR 63 232 -30 483 240 77 77 chr10 133856474 133856560 -11732728 - MER5A DNA MER1_type 0 189 104 2194 132 0 0 chr10 133856560 133856863 -11732425 + AluSq SINE Alu 1 303 -10 483 240 77 77 chr10 133856863 133856959 -11732329 - MER5A DNA MER1_type -84 105 7 1555 162 3 70 chr10 133859392 133859719 -11729569 + AluJo SINE Alu 4 308 -4 2179 123 3 7 chr10 133859852 133860162 -11729126 - AluSg SINE Alu -1 309 1 276 192 77 26 chr10 133860215 133860293 -11728995 + L2 LINE L2 3232 3313 0 2195 95 40 7 chr10 133860445 133860741 -11728547 + AluSx SINE Alu 1 306 -6 376 336 107 12 chr10 133861757 133861947 -11727341 + MIR SINE MIR 45 254 -8 249 33 0 0 chr10 133861953 133861983 -11727305 + (CAT)n Simple_repeat Simple_repeat 2 31 0 231 141 21 92 chr10 133862262 133862404 -11726884 + (CACCC)n Simple_repeat Simple_repeat 1 132 0 223 156 32 86 chr10 133862496 133862682 -11726606 + (CACCC)n Simple_repeat Simple_repeat 2 177 0 504 198 0 83 chr10 133862694 133862886 -11726402 + (CACCC)n Simple_repeat Simple_repeat 2 177 0 482 271 181 20 chr10 133863376 133863580 -11725708 - MIR SINE MIR -6 256 16 6244 84 23 10 chr10 133864862 133866349 -11722939 + L1PA14 LINE L1 4675 6161 0 1331 142 119 85 chr10 133866574 133866869 -11722419 + AluJo SINE Alu 1 305 -7 201 22 89 44 chr10 133868577 133868622 -11720666 + (ATATG)n Simple_repeat Simple_repeat 2 48 0 252 167 0 0 chr10 133868895 133868943 -11720345 + (CACG)n Simple_repeat Simple_repeat 4 51 0 198 0 0 0 chr10 133868944 133868966 -11720322 + (TC)n Simple_repeat Simple_repeat 2 23 0 189 312 13 26 chr10 133869346 133869423 -11719865 - MIR SINE MIR -22 240 165 256 279 58 0 chr10 133869474 133869560 -11719728 - MIR3 SINE MIR -30 178 88 270 202 46 9 chr10 133873350 133873459 -11715829 + (TG)n Simple_repeat Simple_repeat 1 113 0 26 30 0 0 chr10 133876388 133876421 -11712867 + GC_rich Low_complexity Low_complexity 1 33 0 21 82 0 0 chr10 133876489 133876538 -11712750 + GC_rich Low_complexity Low_complexity 1 49 0 198 91 0 0 chr10 133876564 133876597 -11712691 + (CCG)n Simple_repeat Simple_repeat 2 34 0 24 0 0 0 chr10 133876669 133876693 -11712595 + GC_rich Low_complexity Low_complexity 1 24 0 470 260 136 10 chr10 133877085 133877278 -11712010 - MIR SINE MIR -3 259 44 2166 120 0 0 chr10 133879755 133880054 -11709234 + AluSx SINE Alu 1 299 -13 2245 99 3 0 chr10 133880054 133880361 -11708927 + AluSp SINE Alu 1 308 0 471 217 0 140 chr10 133880361 133880453 -11708835 + MIR SINE MIR 80 143 -119 2407 92 0 3 chr10 133880453 133880757 -11708531 - AluSg SINE Alu -7 303 1 471 217 0 140 chr10 133880757 133880821 -11708467 + MIR SINE MIR 143 214 -48 1647 104 159 19 chr10 133880821 133881150 -11708138 - AluSg1 SINE Alu 0 368 2 2111 148 0 3 chr10 133881159 133881470 -11707818 - AluJo SINE Alu -2 310 1 1005 180 23 47 chr10 133881558 133881740 -11707548 + MER44D DNA MER2_type 1 186 -2305 2398 81 0 7 chr10 133881740 133882038 -11707250 - AluSg SINE Alu -14 296 1 1005 180 23 47 chr10 133882038 133882111 -11707177 + MER44D DNA MER2_type 186 520 -89 296 275 101 43 chr10 133882564 133882702 -11706586 - MIR3 SINE MIR -47 161 29 2348 99 0 31 chr10 133882802 133883125 -11706163 - AluSq SINE Alu 0 313 1 416 256 55 78 chr10 133883632 133883976 -11705312 + L1MC4 LINE L1 7707 8042 0 226 386 0 11 chr10 133884196 133884284 -11705004 + MIR SINE MIR 19 105 -103 839 209 50 15 chr10 133884802 133885003 -11704285 - MER3 DNA MER1_type 0 209 2 2241 107 0 3 chr10 133885251 133885550 -11703738 + AluSx SINE Alu 1 298 -14 2283 90 20 0 chr10 133886243 133886542 -11702746 + AluSx SINE Alu 2 306 -6 1606 116 0 5 chr10 133887455 133887671 -11701617 - AluSg SINE Alu -91 219 5 424 276 86 18 chr10 133887917 133888080 -11701208 - MIR SINE MIR -8 254 81 278 331 127 6 chr10 133888346 133888512 -11700776 + MIR SINE MIR 77 262 0 271 326 21 90 chr10 133888544 133888688 -11700600 + MIR SINE MIR 31 164 -98 729 184 15 87 chr10 133889009 133889205 -11700083 + MER53 DNA DNA 5 186 -3 180 282 0 42 chr10 133889453 133889524 -11699764 - L3 LINE CR1 -304 1273 1206 2125 123 7 0 chr10 133890006 133890489 -11698799 - AluSx SINE Alu 0 489 5 1886 218 168 15 chr10 133890862 133891403 -11697885 - MLT1E2 LTR MaLR -2 624 1 560 247 39 11 chr10 133891450 133891628 -11697660 - MLT1C LTR MaLR -28 439 257 201 75 0 192 chr10 133891659 133891805 -11697483 + (TCCC)n Simple_repeat Simple_repeat 4 121 0 667 184 106 11 chr10 133891813 133891992 -11697296 - MLT1C LTR MaLR -186 281 86 1845 121 18 29 chr10 133891993 133892273 -11697015 - AluSx SINE Alu 0 312 36 2468 91 0 3 chr10 133892283 133892627 -11696661 - AluSg SINE Alu 0 343 1 234 0 0 0 chr10 133893533 133893559 -11695729 + (TTTTG)n Simple_repeat Simple_repeat 1 26 0 180 364 68 25 chr10 133893823 133893985 -11695303 + L2 LINE L2 3104 3272 0 214 311 83 53 chr10 133894967 133895099 -11694189 - L2 LINE L2 0 3272 3137 225 291 0 0 chr10 133895264 133895350 -11693938 + GA-rich Low_complexity Low_complexity 2 87 0 520 192 96 0 chr10 133895946 133896050 -11693238 - MER81 DNA DNA 0 114 1 294 286 175 15 chr10 133896113 133896319 -11692969 + LTR16A LTR ERVL 206 444 -6 1219 281 66 24 chr10 133897105 133897604 -11691684 - MLT1G1 LTR MaLR -1 594 75 2391 100 3 0 chr10 133898162 133898463 -11690825 + AluSx SINE Alu 1 302 -10 241 196 43 0 chr10 133899101 133899147 -11690141 - L2 LINE L2 0 3272 3225 2290 97 3 3 chr10 133899295 133899595 -11689693 + AluSq SINE Alu 1 300 -13 255 260 142 24 chr10 133899931 133900058 -11689230 + MIR3 SINE MIR 1 142 -66 420 311 79 11 chr10 133900916 133901106 -11688182 - L2 LINE L2 -13 3300 3098 379 209 217 9 chr10 133901188 133901303 -11687985 - MER5A DNA MER1_type -9 180 42 2208 128 0 0 chr10 133902075 133902373 -11686915 + AluSq SINE Alu 1 298 -15 2407 86 0 0 chr10 133902378 133902668 -11686620 + AluSc SINE Alu 3 292 -17 202 211 0 0 chr10 133903369 133903407 -11685881 + L2 LINE L2 3234 3271 -1 314 211 26 97 chr10 133903609 133903683 -11685605 + MER94 DNA DNA 2 67 -67 2207 113 10 3 chr10 133903683 133903976 -11685312 + AluSx SINE Alu 1 295 -17 314 211 26 97 chr10 133903976 133904015 -11685273 + MER94 DNA DNA 67 107 -27 283 312 73 9 chr10 133904055 133904164 -11685124 - MIR3 SINE MIR -28 180 65 185 235 24 118 chr10 133904303 133904388 -11684900 - MIR SINE MIR -115 147 71 2226 97 7 19 chr10 133904449 133904757 -11684531 - AluSx SINE Alu -8 304 1 2172 117 0 23 chr10 133904946 133905254 -11684034 - AluSx SINE Alu -11 301 1 194 200 36 36 chr10 133905310 133905365 -11683923 + L2 LINE L2 3211 3265 -7 945 209 24 29 chr10 133905653 133905859 -11683429 - MER63A DNA MER1_type -5 205 1 262 301 0 27 chr10 133907476 133907549 -11681739 - MIR SINE MIR -12 250 180 369 146 12 0 chr10 133907587 133907659 -11681629 - Alu SINE Alu -4 298 237 2099 115 11 3 chr10 133908389 133908676 -11680612 - AluSx SINE Alu -10 302 14 1065 239 130 49 chr10 133908681 133909288 -11680000 - HAL1b LINE L1 -677 671 16 1784 147 19 45 chr10 133909291 133909603 -11679685 - AluSx SINE Alu -8 304 1 759 200 0 0 chr10 133909911 133910036 -11679252 - FLAM_A SINE Alu -8 125 1 458 33 17 0 chr10 133910611 133910671 -11678617 + (TTTTC)n Simple_repeat Simple_repeat 1 61 0 1836 149 0 14 chr10 133910672 133910954 -11678334 - AluJo SINE Alu -34 278 1 317 127 0 18 chr10 133911629 133911684 -11677604 - LTR67 LTR ERVL -10 547 494 524 235 0 0 chr10 133912398 133912500 -11676788 + MER5A DNA MER1_type 8 109 -80 244 345 20 20 chr10 133912581 133912729 -11676559 + L1MC5 LINE L1 7081 7228 -733 411 274 78 17 chr10 133912852 133913316 -11675972 + L1MC5 LINE L1 7268 7785 -176 848 97 0 0 chr10 133913448 133913551 -11675737 - AluSc SINE Alu -206 103 1 809 233 63 0 chr10 133913552 133913711 -11675577 - AluJo/FRAM SINE Alu -15 297 129 325 214 0 0 chr10 133913712 133913768 -11675520 - AluJ/FLAM SINE Alu -245 57 2 203 258 197 0 chr10 133913769 133913835 -11675453 + MIR SINE MIR 108 186 -76 815 205 15 113 chr10 133913935 133913964 -11675324 - HsTC2 DNA Tc2 -90 1808 1778 855 249 70 76 chr10 133913964 133914105 -11675183 + MER58B DNA MER1_type 2 142 -2278 1908 154 0 32 chr10 133914105 133914417 -11674871 + AluJb SINE Alu 1 302 -10 855 249 70 76 chr10 133914417 133914616 -11674672 + MER58B DNA MER1_type 142 340 -1 815 205 15 113 chr10 133914616 133914913 -11674375 - HsTC2 DNA Tc2 -120 1778 1338 2570 132 9 32 chr10 133914915 133915379 -11673909 + L1PA13 LINE L1 5710 6162 -1 23 0 0 0 chr10 133915800 133915823 -11673465 + AT_rich Low_complexity Low_complexity 1 23 0 312 19 93 0 chr10 133915824 133915878 -11673410 + L1MA5 LINE L1 6241 6299 -1 2281 123 0 0 chr10 133915888 133916198 -11673090 + AluSx SINE Alu 2 311 -1 300 257 147 0 chr10 133916232 133916341 -11672947 - HAL1b LINE L1 -29 1319 1195 238 247 74 25 chr10 133916377 133916458 -11672830 + L2 LINE L2 3227 3311 -2 341 217 94 109 chr10 133916467 133916605 -11672683 - HAL1b LINE L1 -212 1136 1001 472 203 0 0 chr10 133916605 133916684 -11672604 - MER2 DNA MER2_type 0 345 267 1074 151 46 77 chr10 133916705 133916990 -11672298 + AluJb SINE Alu 1 276 -36 578 280 86 43 chr10 133917305 133917655 -11671633 + L2 LINE L2 2907 3271 -1 195 171 0 0 chr10 133917700 133917735 -11671553 - L2 LINE L2 -1 3271 3237 1318 214 91 27 chr10 133917742 133918149 -11671139 + Charlie4a DNA MER1_type 7 439 -69 4116 123 7 10 chr10 133918151 133919056 -11670232 + L1PB1 LINE L1 4955 5859 -292 593 115 21 0 chr10 133919214 133919310 -11669978 + AluSc SINE Alu 211 308 -1 1884 164 0 19 chr10 133919454 133919766 -11669522 + AluJo SINE Alu 1 306 -6 315 295 35 29 chr10 133919780 133919925 -11669363 - MIR SINE MIR -51 211 67 199 171 49 0 chr10 133919936 133919977 -11669311 + MER5A DNA MER1_type 126 168 -21 513 223 36 9 chr10 133920367 133920479 -11668809 - MIR SINE MIR -14 248 134 1122 71 68 153 chr10 133920795 133921090 -11668198 + L1PB1 LINE L1 5879 6151 0 368 188 14 0 chr10 133921092 133921161 -11668127 + Charlie4a DNA MER1_type 423 492 -16 955 256 50 36 chr10 133921161 133921524 -11667764 - L2 LINE L2 -41 3272 2905 360 281 0 0 chr10 133922814 133922896 -11666392 - L2 LINE L2 -9 3304 3223 1857 150 0 14 chr10 133923060 133923244 -11666044 - AluJb SINE Alu 0 317 137 2124 142 0 3 chr10 133923244 133923554 -11665734 - AluSx SINE Alu -3 309 1 1857 150 0 14 chr10 133923554 133923690 -11665598 - AluJb SINE Alu -180 137 1 272 328 38 23 chr10 133923690 133923821 -11665467 - L2 LINE L2 -108 3205 3073 2255 96 3 7 chr10 133923858 133924150 -11665138 + AluSx SINE Alu 1 291 -21 921 209 46 38 chr10 133924199 133924462 -11664826 + MLT1B LTR MaLR 1 265 -125 276 274 57 38 chr10 133924798 133924904 -11664384 - L2 LINE L2 0 3313 3206 498 167 2 3 chr10 133925152 133925244 -11664044 + MLT1B LTR MaLR 258 336 -54 366 238 59 10 chr10 133926319 133926420 -11662868 + L2 LINE L2 3206 3311 -2 356 262 16 49 chr10 133926637 133926759 -11662529 - MIR SINE MIR -72 190 73 1169 198 17 24 chr10 133926960 133927253 -11662035 - L1MB5 LINE L1 -6 6168 5878 597 139 0 0 chr10 133927256 133927364 -11661924 + (TTCC)n Simple_repeat Simple_repeat 3 110 0 2289 96 0 0 chr10 133927366 133927646 -11661642 - AluSx SINE Alu -32 280 1 453 189 99 0 chr10 133927646 133927757 -11661531 - L1MB5 LINE L1 -286 5888 5767 450 270 158 7 chr10 133928849 133929001 -11660287 - MER5A DNA MER1_type -1 188 14 2476 94 0 0 chr10 133930165 133930474 -11658814 + AluSc SINE Alu 1 309 0 195 316 70 0 chr10 133930505 133930562 -11658726 - MIR SINE MIR -165 97 37 212 225 0 0 chr10 133931573 133931613 -11657675 - MIR SINE MIR -2 260 221 6064 111 9 6 chr10 133931738 133932637 -11656651 + THE1B-int LTR MaLR 679 1580 0 2306 115 42 20 chr10 133932637 133932993 -11656295 + THE1B LTR MaLR 1 364 0 5493 220 53 42 chr10 133932999 133934574 -11654714 - L1MC4 LINE L1 0 8042 6450 23 0 0 0 chr10 133935072 133935095 -11654193 + AT_rich Low_complexity Low_complexity 1 23 0 1095 203 84 10 chr10 133935187 133935990 -11653298 + L1M4 LINE L1 4130 5043 -1103 2132 131 0 13 chr10 133935992 133936306 -11652982 + AluSx SINE Alu 2 311 -1 659 106 0 21 chr10 133936306 133936400 -11652888 - MLT1B LTR MaLR -298 92 1 208 345 156 35 chr10 133936447 133936968 -11652320 - L3 LINE CR1 -497 1080 497 594 259 54 0 chr10 133937154 133937301 -11651987 + MIR SINE MIR 103 257 -5 597 236 14 28 chr10 133937365 133937509 -11651779 + MIR SINE MIR 81 222 -40 953 237 115 47 chr10 133937681 133938067 -11651221 - L1MC4 LINE L1 0 8042 7501 1418 287 101 44 chr10 133938098 133938753 -11650535 - MER115 DNA AcHobo -1 692 1 289 317 50 0 chr10 133938991 133939092 -11650196 + L2 LINE L2 3208 3313 0 202 286 16 79 chr10 133939023 133939149 -11650139 + L3 LINE CR1 1417 1534 -43 * 480 176 0 0 chr10 133939149 133939251 -11650037 + (TGGA)n Simple_repeat Simple_repeat 3 104 0 273 233 0 14 chr10 133939766 133939839 -11649449 - L1MC4 LINE L1 0 8042 7971 279 160 117 64 chr10 133939841 133939935 -11649353 - L1MC4 LINE L1 -128 7774 7582 789 160 0 0 chr10 133940137 133940256 -11649032 + AluJb SINE Alu 1 119 -193 2778 93 3 3 chr10 133940525 133940889 -11648399 + THE1B LTR MaLR 1 364 0 342 0 0 0 chr10 133941233 133941271 -11648017 + (TG)n Simple_repeat Simple_repeat 2 39 0 587 147 31 78 chr10 133941565 133941694 -11647594 - FLAM_C SINE Alu -19 124 2 2240 98 0 0 chr10 133941714 133942019 -11647269 - AluSg SINE Alu 0 310 6 2345 213 93 62 chr10 133942040 133942992 -11646296 - L1MC5 LINE L1 -49 7912 6931 190 125 0 0 chr10 133943077 133943109 -11646179 - L3b LINE CR1 -360 1223 1192 2060 126 7 0 chr10 133943109 133943418 -11645870 + AluSq SINE Alu 1 311 -2 180 0 0 0 chr10 133943468 133943488 -11645800 + (CA)n Simple_repeat Simple_repeat 2 21 0 350 268 27 54 chr10 133943909 133944021 -11645267 - MIR3 SINE MIR -11 197 89 518 291 27 61 chr10 133944385 133944715 -11644573 + L1ME4a LINE L1 5297 5615 -2193 2358 95 65 19 chr10 133944715 133945084 -11644204 + MER4B LTR ERV1 1 386 -224 257 285 19 57 chr10 133945168 133945309 -11643979 - L1ME3A LINE L1 -64 6106 5970 1919 145 3 3 chr10 133945309 133945613 -11643675 - AluSx SINE Alu 0 312 9 257 285 19 57 chr10 133945613 133945629 -11643659 - L1ME3A LINE L1 -200 5970 5955 1179 219 193 44 chr10 133945691 133946167 -11643121 - L1MC5 LINE L1 -449 7512 6966 260 289 23 16 chr10 133946178 133946306 -11642982 - L1MC4 LINE L1 -950 7092 6964 1129 235 61 61 chr10 133946536 133946881 -11642407 - MLT1J LTR MaLR -87 424 80 219 228 35 35 chr10 133946918 133946975 -11642313 - MER5A DNA MER1_type -5 184 128 308 260 0 14 chr10 133947544 133947617 -11641671 - MER5A DNA MER1_type -116 73 2 2089 121 0 28 chr10 133947771 133948093 -11641195 + AluSq SINE Alu 1 313 0 206 167 28 0 chr10 133948533 133948569 -11640719 + L2 LINE L2 3149 3185 -87 1871 113 3 32 chr10 133948752 133949034 -11640254 + AluSx SINE Alu 23 296 -16 750 274 40 52 chr10 133949125 133949244 -11640044 - MIR SINE MIR 0 262 143 2393 74 0 3 chr10 133949244 133949553 -11639735 - AluSp SINE Alu -5 308 1 750 274 40 52 chr10 133949553 133949681 -11639607 - MIR SINE MIR -119 143 18 2142 144 10 57 chr10 133952526 133952930 -11636358 + MLT1B LTR MaLR 3 387 -3 236 282 0 14 chr10 133953596 133953667 -11635621 + (CATATA)n Simple_repeat Simple_repeat 5 74 0 248 299 111 43 chr10 133953688 133953805 -11635483 - L2 LINE L2 -5 3267 3143 3288 167 13 13 chr10 133953859 133954415 -11634873 + MER41D LTR ERV1 1 556 -1 1517 216 0 3 chr10 133955011 133955294 -11633994 + AluJb SINE Alu 1 282 -30 252 0 0 0 chr10 133955688 133955716 -11633572 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 312 266 70 63 chr10 133955734 133955769 -11633519 + L1ME4a LINE L1 5963 5996 -125 2171 104 0 3 chr10 133955769 133956067 -11633221 + AluSx SINE Alu 1 297 -15 312 266 70 63 chr10 133956067 133956189 -11633099 + L1ME4a LINE L1 5996 6121 0 2049 150 6 38 chr10 133956406 133956753 -11632535 - MER1B DNA MER1_type 0 337 2 552 335 52 7 chr10 133957981 133958250 -11631038 - L3b LINE CR1 -168 1415 1135 252 59 0 0 chr10 133958430 133958464 -11630824 + (TC)n Simple_repeat Simple_repeat 1 34 0 192 40 0 0 chr10 133958467 133958492 -11630796 + (CA)n Simple_repeat Simple_repeat 1 25 0 2252 70 0 3 chr10 133959133 133959437 -11629851 + AluY SINE Alu 1 303 0 2087 100 7 7 chr10 133959921 133960222 -11629066 + AluSx SINE Alu 1 301 -11 1166 258 206 5 chr10 133960299 133960687 -11628601 - MLT1J LTR MaLR -10 501 36 6603 52 0 12 chr10 133960844 133961658 -11627630 - L1PA7 LINE L1 0 6154 5351 302 304 15 44 chr10 133961992 133962127 -11627161 - MIR3 SINE MIR -45 163 33 2259 94 0 0 chr10 133962679 133962978 -11626310 - AluSx SINE Alu -13 299 1 1021 151 0 0 chr10 133962978 133963144 -11626144 - FRAM SINE Alu -3 173 8 720 256 64 15 chr10 133964153 133964356 -11624932 + MIR SINE MIR 50 262 0 344 283 33 72 chr10 133964628 133964780 -11624508 - L2 LINE L2 0 3272 3127 923 273 77 40 chr10 133964823 133965175 -11624113 - MLT1G1 LTR MaLR -7 588 224 256 286 71 31 chr10 133965208 133965306 -11623982 + MIR3 SINE MIR 81 182 -26 219 352 23 16 chr10 133967010 133967138 -11622150 - MIR SINE MIR -50 212 84 1870 122 0 58 chr10 133967318 133967646 -11621642 - AluJo SINE Alu -3 309 1 2416 79 0 0 chr10 133969024 133969329 -11619959 + AluSq SINE Alu 1 305 -8 1599 169 47 0 chr10 133969458 133969736 -11619552 + AluJo SINE Alu 1 291 -21 22 0 0 0 chr10 133971060 133971082 -11618206 + AT_rich Low_complexity Low_complexity 1 22 0 1551 135 23 0 chr10 133971082 133971342 -11617946 - L1MA2 LINE L1 0 6304 6039 240 35 0 0 chr10 133973030 133973059 -11616229 + (TTCA)n Simple_repeat Simple_repeat 3 31 0 189 351 0 0 chr10 133973065 133973122 -11616166 - L2 LINE L2 -9 3263 3207 575 217 0 0 chr10 133974446 133974566 -11614722 - L1MB4 LINE L1 -6 6174 6055 1797 140 0 0 chr10 133974598 133974870 -11614418 - AluSx SINE Alu -40 272 1 1363 183 11 19 chr10 133974870 133975138 -11614150 - L1MB5 LINE L1 -108 6066 5801 322 288 45 15 chr10 133975312 133975444 -11613844 + MER5A DNA MER1_type 35 170 -19 188 232 143 0 chr10 133975601 133975657 -11613631 + L2 LINE L2 3186 3249 -64 192 224 119 0 chr10 133975684 133975751 -11613537 - MIR SINE MIR -10 252 178 2532 193 19 36 chr10 133976298 133976878 -11612410 + L1MB4 LINE L1 5611 6180 0 509 283 14 0 chr10 133977711 133977849 -11611439 - MIR SINE MIR -10 252 113 1400 143 0 13 chr10 133977906 133978130 -11611158 - AluSx SINE Alu -91 221 1 865 221 6 0 chr10 133978518 133978699 -11610589 + L1MD2 LINE L1 6166 6347 -12 515 202 21 0 chr10 133980671 133980765 -11608523 - FLAM_A SINE Alu -20 122 27 396 0 0 0 chr10 133981273 133981317 -11607971 + (TG)n Simple_repeat Simple_repeat 2 45 0 1573 135 17 51 chr10 133981318 133981614 -11607674 - AluJb SINE Alu -26 286 1 206 328 86 35 chr10 133982171 133982287 -11607001 + L2 LINE L2 2861 2982 -290 361 264 130 21 chr10 133982548 133982701 -11606587 + L2 LINE L2 3026 3161 -152 2004 119 154 19 chr10 133982701 133983078 -11606210 - MSTA LTR MaLR 0 428 1 361 264 130 21 chr10 133983078 133983137 -11606151 + L2 LINE L2 3161 3308 -5 207 0 0 0 chr10 133984714 133984737 -11604551 + (TA)n Simple_repeat Simple_repeat 1 23 0 2166 82 4 0 chr10 133984738 133985018 -11604270 - AluSp SINE Alu -31 282 2 21 0 0 0 chr10 133985705 133985726 -11603562 + AT_rich Low_complexity Low_complexity 1 21 0 181 282 91 64 chr10 133987293 133987403 -11601885 - MIR SINE MIR -74 134 22 2313 70 0 11 chr10 133989167 133989473 -11599815 - AluSg SINE Alu 0 303 1 249 185 19 0 chr10 133989481 133989535 -11599753 + MER3 DNA MER1_type 155 209 0 205 289 0 0 chr10 133990105 133990157 -11599131 + (CATATA)n Simple_repeat Simple_repeat 5 56 0 1440 153 50 0 chr10 133990158 133990399 -11598889 - AluJo SINE Alu -23 289 37 481 205 8 82 chr10 133993994 133994116 -11595172 + MER94 DNA DNA 1 113 -21 2215 119 3 3 chr10 133994942 133995252 -11594036 - AluSx SINE Alu -2 310 1 32 26 0 0 chr10 133995260 133995299 -11593989 + AT_rich Low_complexity Low_complexity 1 39 0 1396 246 41 51 chr10 133995709 133996216 -11593072 + MLT1J LTR MaLR 2 503 -8 478 284 48 63 chr10 133996220 133996305 -11592983 + L1MC4a LINE L1 5564 5649 -2159 471 258 126 19 chr10 133996305 133996464 -11592824 - MER5B DNA MER1_type 0 178 3 2307 71 3 35 chr10 133996465 133996776 -11592512 + AluY SINE Alu 1 301 -10 478 284 48 63 chr10 133996776 133996959 -11592329 + L1MC4a LINE L1 5648 5830 -1978 560 281 76 5 chr10 133997203 133997388 -11591900 + L2 LINE L2 3112 3309 -4 313 299 56 35 chr10 133998322 133998466 -11590822 + LTR33A LTR ERVL 2 148 -375 633 260 44 6 chr10 133998572 133998753 -11590535 + LTR33A LTR ERVL 328 515 -8 605 155 0 0 chr10 134002282 134002385 -11586903 - L1MB8 LINE L1 -5 6173 6071 1798 173 38 0 chr10 134002406 134002750 -11586538 - L1MB8 LINE L1 -585 5593 5238 357 62 0 0 chr10 134002923 134002971 -11586317 + (TGAA)n Simple_repeat Simple_repeat 2 49 0 420 282 15 8 chr10 134002984 134003115 -11586173 + (TGGA)n Simple_repeat Simple_repeat 3 134 0 217 286 11 22 chr10 134003178 134003269 -11586019 - MIR SINE MIR -86 122 33 1274 196 46 3 chr10 134004791 134005076 -11584212 + MER33 DNA MER1_type 6 302 -22 514 212 17 67 chr10 134005209 134005388 -11583900 + MER5B DNA MER1_type 6 175 -3 2286 102 6 13 chr10 134005562 134005876 -11583412 - AluSx SINE Alu 0 312 1 2333 96 7 0 chr10 134006821 134007114 -11582174 - AluSx SINE Alu -15 297 3 188 245 20 0 chr10 134008391 134008440 -11580848 + L2 LINE L2 3262 3311 -2 2115 104 4 4 chr10 134009128 134009408 -11579880 - AluSg SINE Alu -30 280 1 213 250 107 36 chr10 134009505 134009617 -11579671 + MER5B DNA MER1_type 3 122 -56 1419 185 26 114 chr10 134009620 134010048 -11579240 - MLT1B LTR MaLR 0 390 1 434 188 68 10 chr10 134010306 134010411 -11578877 + MER69 DNA AcHobo 63 2522 -4 263 254 15 0 chr10 134010575 134010642 -11578646 - MLT1J LTR MaLR -332 179 112 1651 185 32 0 chr10 134011237 134011518 -11577770 + AluSx SINE Alu 1 290 -22 324 83 0 0 chr10 134011588 134011636 -11577652 + (CA)n Simple_repeat Simple_repeat 1 48 0 652 281 63 9 chr10 134012652 134012878 -11576410 + MIR SINE MIR 26 262 0 271 250 76 65 chr10 134013113 134013297 -11575991 + L1ME3 LINE L1 5302 5487 -2321 1059 232 60 41 chr10 134014363 134014729 -11574559 - MER93b LTR ERV1 0 373 1 234 326 90 14 chr10 134015441 134015585 -11573703 + MIR SINE MIR 108 262 0 458 208 286 0 chr10 134015600 134015768 -11573520 + MIR SINE MIR 9 224 -38 1654 130 8 8 chr10 134016000 134016254 -11573034 - AluSq SINE Alu -58 255 2 266 143 238 0 chr10 134016260 134016323 -11572965 - Charlie7 DNA MER1_type -2207 405 328 232 254 36 27 chr10 134016391 134016501 -11572787 - Charlie7 DNA MER1_type -2443 169 59 593 242 0 0 chr10 134016557 134016681 -11572607 + FLAM_A SINE Alu 1 124 -9 353 137 68 0 chr10 134016691 134016764 -11572524 + L1MA8 LINE L1 6214 6291 0 1210 258 98 19 chr10 134016838 134017315 -11571973 + L1ME3 LINE L1 5633 6147 -15 2298 87 0 3 chr10 134018514 134018821 -11570467 + AluSx SINE Alu 1 306 0 4058 169 23 3 chr10 134018834 134019543 -11569745 - L1MB2 LINE L1 -2 6169 5447 198 0 0 0 chr10 134020426 134020448 -11568840 + (A)n Simple_repeat Simple_repeat 1 22 0 526 213 19 73 chr10 134021149 134021437 -11567851 - MLT1A1 LTR MaLR 0 396 33 2031 162 10 54 chr10 134022369 134022463 -11566825 + MLT1B LTR MaLR 1 98 -292 2242 131 0 0 chr10 134022463 134022769 -11566519 - AluSx SINE Alu -6 306 1 2031 162 10 54 chr10 134022769 134023082 -11566206 + MLT1B LTR MaLR 98 390 0 296 314 43 4 chr10 134023181 134023382 -11565906 + L3 LINE CR1 1216 1490 -87 183 317 19 0 chr10 134023517 134023621 -11565667 - L2 LINE L2 -559 2755 2650 545 231 186 24 chr10 134023880 134024175 -11565113 - LTR16B LTR ERVL 0 464 122 588 229 30 78 chr10 134024338 134024569 -11564719 + L2 LINE L2 3093 3312 -1 1721 169 51 93 chr10 134026091 134026208 -11563080 + MLT2D LTR ERVL 1 121 -293 2435 89 0 3 chr10 134026208 134026521 -11562767 + AluSx SINE Alu 1 312 0 1721 169 51 93 chr10 134026521 134026835 -11562453 + MLT2D LTR ERVL 121 414 0 2053 107 6 49 chr10 134027472 134027755 -11561533 + AluSx SINE Alu 1 270 -42 279 0 0 0 chr10 134027755 134027786 -11561502 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2053 107 6 49 chr10 134027786 134027828 -11561460 + AluSx SINE Alu 270 312 0 214 267 100 0 chr10 134030052 134030142 -11559146 - MIR SINE MIR -88 120 22 309 89 0 0 chr10 134030182 134030227 -11559061 + (TG)n Simple_repeat Simple_repeat 2 46 0 934 195 131 72 chr10 134030692 134031067 -11558221 + LTR16A1 LTR ERVL 61 457 0 244 298 48 0 chr10 134031355 134031439 -11557849 + L2 LINE L2 3226 3313 0 432 67 0 0 chr10 134031459 134031519 -11557769 + (TGGA)n Simple_repeat Simple_repeat 2 61 0 585 253 94 9 chr10 134032028 134032261 -11557027 - MER112 DNA MER1_type -2 254 2 1713 122 4 0 chr10 134032500 134032737 -11556551 + AluSx SINE Alu 1 238 -74 246 278 11 73 chr10 134033043 134033234 -11556054 + G-rich Low_complexity Low_complexity 1 179 0 241 221 0 106 chr10 134033524 134033663 -11555625 - L1MD3 LINE L1 -147 7772 7541 1370 290 101 44 chr10 134033696 134034351 -11554937 - MER115 DNA AcHobo -1 692 1 248 317 50 0 chr10 134034589 134034690 -11554598 + L2 LINE L2 3208 3313 0 743 108 0 15 chr10 134034710 134034840 -11554448 + (TGGA)n Simple_repeat Simple_repeat 2 129 0 479 207 69 2 chr10 134034968 134035145 -11554143 + L1MD1 LINE L1 4137 4331 -1815 3256 163 148 3 chr10 134035197 134035861 -11553427 + L1MB3 LINE L1 5347 6106 -77 2848 228 57 24 chr10 134035860 134035981 -11553307 + L1MD1 LINE L1 4316 4432 -1810 * 2206 174 38 24 chr10 134035981 134036434 -11552854 + MER65C LTR ERV1 3 461 0 2848 228 57 24 chr10 134036434 134037784 -11551504 + L1MD1 LINE L1 4432 5838 -404 396 40 0 0 chr10 134037809 134037859 -11551429 + (CA)n Simple_repeat Simple_repeat 2 51 0 391 208 165 123 chr10 134038597 134038954 -11550334 - L1M4 LINE L1 -2369 3777 3406 * 1359 223 5 59 chr10 134038953 134039326 -11549962 - L1MDa LINE L1 -6174 366 14 325 324 86 0 chr10 134040179 134040284 -11549004 - MER5B DNA MER1_type -64 114 1 737 162 0 74 chr10 134041161 134041309 -11547979 - FLAM_C SINE Alu -6 137 1 416 190 33 33 chr10 134041309 134041430 -11547858 - L1MC3 LINE L1 0 7785 7665 814 191 77 5 chr10 134041436 134041630 -11547658 - L1MC2 LINE L1 -9 6335 6128 2033 141 13 0 chr10 134041633 134041932 -11547356 - AluSx SINE Alu -9 303 1 982 219 70 14 chr10 134042713 134043244 -11546044 + L1ME LINE L1 5008 5568 -596 536 263 190 31 chr10 134043262 134043620 -11545668 - L1MC2 LINE L1 -2134 5674 5260 363 310 66 24 chr10 134043802 134044134 -11545154 - L1MC2 LINE L1 -1072 5074 4729 1149 154 40 62 chr10 134044316 134044543 -11544745 + AluJb SINE Alu 85 306 -6 186 43 0 0 chr10 134044571 134044594 -11544694 + (A)n Simple_repeat Simple_repeat 1 23 0 2062 145 0 19 chr10 134044875 134045193 -11544095 + AluSx SINE Alu 1 312 0 209 317 150 17 chr10 134045194 134045314 -11543974 - L2 LINE L2 -4 3268 3133 963 166 28 2 chr10 134047237 134047446 -11541842 - L1MB7 LINE L1 -3 6163 5951 486 290 24 12 chr10 134047532 134047701 -11541587 + L2 LINE L2 2793 2963 -351 234 282 92 55 chr10 134047735 134047898 -11541390 + L2 LINE L2 3082 3250 -63 8417 97 2 3 chr10 134047998 134049205 -11540083 - THE1B-int LTR MaLR -374 1206 1 2296 113 22 28 chr10 134049205 134049568 -11539720 - THE1B LTR MaLR 0 364 4 244 316 138 44 chr10 134049620 134049845 -11539443 - L3 LINE CR1 -715 862 617 21 0 0 0 chr10 134049883 134049904 -11539384 + AT_rich Low_complexity Low_complexity 1 21 0 10637 134 77 16 chr10 134050343 134050383 -11538905 + Tigger1 DNA MER2_type 16 52 -2366 216 0 0 0 chr10 134050383 134050407 -11538881 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 10637 134 77 16 chr10 134050407 134051189 -11538099 + Tigger1 DNA MER2_type 52 785 -1633 2370 83 0 3 chr10 134051189 134051490 -11537798 + AluY SINE Alu 1 300 -11 10637 134 77 16 chr10 134051490 134052630 -11536658 + Tigger1 DNA MER2_type 785 2098 -320 2342 146 21 17 chr10 134052630 134053048 -11536240 + MSTB1 LTR MaLR 1 420 -12 1674 148 55 26 chr10 134053057 134053368 -11535920 + Tigger1 DNA MER2_type 2099 2418 0 565 339 109 18 chr10 134053558 134054119 -11535169 + L2 LINE L2 1620 2231 -1083 3045 179 38 7 chr10 134054166 134054753 -11534535 + MER6A DNA MER2_type 1 605 0 241 266 145 8 chr10 134054826 134054950 -11534338 + L1MC/D LINE L1 5622 5762 -2046 1729 169 39 11 chr10 134054976 134055338 -11533950 + L1MC2 LINE L1 5613 5984 -360 2270 203 46 43 chr10 134055444 134056055 -11533233 + Charlie1 DNA MER1_type 1761 2373 -388 413 145 14 0 chr10 134056799 134056868 -11532420 - MER58 DNA MER1_type -1 2419 2350 * 1089 196 45 0 chr10 134056853 134057073 -11532215 - MER58 DNA MER1_type -109 232 3 21 57 0 0 chr10 134057148 134057183 -11532105 + AT_rich Low_complexity Low_complexity 1 35 0 226 282 150 68 chr10 134057641 134057861 -11531427 - L2 LINE L2 -5 3267 3030 1320 243 66 86 chr10 134057905 134058337 -11530951 - L1MC4 LINE L1 -5 8037 7627 1591 211 0 7 chr10 134058337 134058621 -11530667 - AluJb SINE Alu -30 282 1 1320 243 66 86 chr10 134058621 134059006 -11530282 - L1MC4 LINE L1 -415 7627 7236 22 0 0 0 chr10 134059086 134059108 -11530180 + AT_rich Low_complexity Low_complexity 1 22 0 593 299 107 13 chr10 134059200 134059434 -11529854 + MIR SINE MIR 7 262 0 381 182 6 115 chr10 134059892 134060057 -11529231 + L1MC5 LINE L1 6820 6966 -995 275 336 109 15 chr10 134061360 134061497 -11527791 + MIR3 SINE MIR 52 201 -7 257 312 113 43 chr10 134061743 134061974 -11527314 + L2 LINE L2 3011 3257 -56 2180 112 7 0 chr10 134062181 134062475 -11526813 + AluSx SINE Alu 1 296 -16 1980 133 4 0 chr10 134065891 134066161 -11523127 - AluSx SINE Alu -12 300 30 1893 106 22 0 chr10 134066644 134066947 -11522341 - AluY SINE Alu 0 309 1 2121 138 0 0 chr10 134067080 134067378 -11521910 - AluSg SINE Alu -12 298 1 422 218 22 159 chr10 134067413 134067822 -11521466 + L1MC4 LINE L1 7688 8040 -2 1936 149 13 7 chr10 134068326 134068634 -11520654 - AluJb SINE Alu -2 310 1 2459 34 10 3 chr10 134071514 134071812 -11517476 - AluY SINE Alu -11 300 1 778 127 33 83 chr10 134072179 134072360 -11516928 - MER20 DNA MER1_type 0 219 48 889 200 64 129 chr10 134072691 134073142 -11516146 + MLT1A1 LTR MaLR 1 359 -6 226 238 0 0 chr10 134073171 134073213 -11516075 + 5S rRNA rRNA 1 42 -79 2213 51 41 37 chr10 134073636 134073931 -11515357 + AluY SINE Alu 1 296 -15 248 162 0 0 chr10 134074386 134074423 -11514865 + Alu SINE Alu 1 37 -263 2334 94 0 0 chr10 134074692 134074990 -11514298 - AluSg1 SINE Alu -11 298 1 1160 102 27 16 chr10 134078935 134079122 -11510166 + L1PA8 LINE L1 5984 6172 0 1353 146 49 28 chr10 134079675 134079962 -11509326 - L1MA4 LINE L1 -21 6279 5987 200 269 0 64 chr10 134080024 134080102 -11509186 + MIR SINE MIR 168 240 -22 456 237 110 17 chr10 134080191 134080364 -11508924 - MER112 DNA MER1_type -7 253 65 320 326 108 0 chr10 134080712 134080841 -11508447 - MIR3 SINE MIR -34 174 32 448 203 0 24 chr10 134081218 134081341 -11507947 - L1M4 LINE L1 -1808 4338 4219 284 250 107 18 chr10 134081846 134081958 -11507330 - MER112 DNA MER1_type -6 254 133 2122 91 0 88 chr10 134082193 134082535 -11506753 - AluSx SINE Alu 0 312 1 880 302 250 43 chr10 134082569 134084620 -11504668 + L2 LINE L2 735 3272 0 477 337 10 10 chr10 134085105 134085307 -11503981 + LTR16C LTR ERVL 290 491 0 3225 78 23 0 chr10 134086249 134086683 -11502605 + MLT2A1 LTR ERVL 1 444 0 497 238 46 0 chr10 134087076 134087227 -11502061 + MER104 DNA Tc2 18 175 -5 866 174 0 41 chr10 134087513 134087685 -11501603 - FRAM SINE Alu -1 165 1 2163 117 0 3 chr10 134088204 134088503 -11500785 + AluSx SINE Alu 1 298 -14 270 0 0 0 chr10 134089831 134089861 -11499427 + (T)n Simple_repeat Simple_repeat 1 30 0 1472 193 0 0 chr10 134090015 134090258 -11499030 + AluJo SINE Alu 1 243 -69 639 245 90 27 chr10 134092736 134092924 -11496364 - MIR SINE MIR -39 223 24 2244 119 0 0 chr10 134092924 134093226 -11496062 - AluSx SINE Alu -10 302 1 1206 213 103 101 chr10 134143947 134143966 -11445322 + MER72 LTR ERV1 76 93 -629 2073 74 0 74 chr10 134143966 134144292 -11444996 + AluSp SINE Alu 1 302 -11 1206 213 103 101 chr10 134144292 134144864 -11444424 + MER72 LTR ERV1 93 668 -54 337 259 93 37 chr10 134145409 134145517 -11443771 + MIR SINE MIR 101 214 -48 1122 231 33 75 chr10 134145623 134145856 -11443432 - MLT1B LTR MaLR -1 389 177 1939 141 3 6 chr10 134145856 134146169 -11443119 - AluJb SINE Alu 0 312 1 1122 231 33 75 chr10 134146169 134146324 -11442964 - MLT1B LTR MaLR -213 177 17 533 88 0 0 chr10 134146577 134146645 -11442643 - AluS SINE Alu -244 69 2 1295 149 52 10 chr10 134146647 134147009 -11442279 - L1MCa LINE L1 -4575 1851 1380 505 180 82 16 chr10 134147009 134147049 -11442239 - Charlie5 DNA MER1_type -57 105 69 2263 85 3 16 chr10 134147049 134147365 -11441923 + AluSp SINE Alu 1 312 -1 505 180 82 16 chr10 134147365 134147451 -11441837 - Charlie5 DNA MER1_type -93 69 1 1998 118 0 16 chr10 134147855 134148161 -11441127 + AluSg SINE Alu 1 301 -9 311 266 13 0 chr10 134148476 134148555 -11440733 + MIR SINE MIR 74 153 -109 368 78 0 0 chr10 134148810 134148861 -11440427 - AluSq SINE Alu -6 297 247 1788 94 39 0 chr10 134148876 134149131 -11440157 - AluSq SINE Alu -48 265 1 355 178 11 56 chr10 134149919 134150009 -11439279 - MER20 DNA MER1_type 0 219 134 1710 261 68 7 chr10 134150174 134150630 -11438658 - MLT1H1 LTR MaLR -17 538 55 1976 112 0 16 chr10 134150646 134150949 -11438339 + AluSx SINE Alu 1 298 -14 1331 106 14 0 chr10 134151652 134151859 -11437429 - AluY SINE Alu -8 303 94 246 81 29 0 chr10 134151989 134152032 -11437256 + L1M2 LINE L1 5743 5787 -397 1291 154 107 29 chr10 134152032 134152304 -11436984 + AluSg SINE Alu 1 293 -17 557 207 33 80 chr10 134152481 134152631 -11436657 - L1MC5 LINE L1 -570 7391 7249 359 225 44 62 chr10 134152664 134152824 -11436464 + L1MC5 LINE L1 7717 7873 -88 23 0 0 0 chr10 134152832 134152855 -11436433 + AT_rich Low_complexity Low_complexity 1 23 0 2076 111 0 46 chr10 134152893 134153217 -11436071 + AluSx SINE Alu 1 309 -3 458 295 35 53 chr10 134153218 134153445 -11435843 + L2 LINE L2 2836 3058 -214 855 77 13 58 chr10 134154481 134154637 -11434651 + AluSq/x SINE Alu 1 149 -164 260 153 47 0 chr10 134155029 134155114 -11434174 + CT-rich Low_complexity Low_complexity 4 92 0 864 210 0 12 chr10 134156069 134156236 -11433052 - AluJo/FRAM SINE Alu -1 301 137 1216 101 37 5 chr10 134156239 134156428 -11432860 - AluY SINE Alu -14 297 103 2377 70 0 6 chr10 134157983 134158295 -11430993 - AluY SINE Alu -1 310 1 355 135 18 153 chr10 134158498 134158539 -11430749 + L1MCa LINE L1 2283 2328 -4098 2117 121 3 6 chr10 134158539 134158852 -11430436 + AluSx SINE Alu 1 312 0 355 135 18 153 chr10 134158852 134158921 -11430367 + L1MCa LINE L1 2328 2378 -4048 335 221 0 0 chr10 134158922 134158991 -11430297 + AluSx SINE Alu 1 54 -248 3057 112 16 5 chr10 134158991 134159438 -11429850 - LTR22A LTR ERVK 0 458 7 1732 107 12 4 chr10 134159442 134159686 -11429602 + AluSx SINE Alu 50 295 -17 742 210 22 11 chr10 134159686 134159867 -11429421 + L1MCa LINE L1 2425 2607 -4000 1415 155 37 19 chr10 134159875 134160146 -11429142 + AluJo SINE Alu 11 286 -26 2107 228 39 22 chr10 134160152 134160697 -11428591 + L1MCa LINE L1 2553 3112 -3314 458 228 132 9 chr10 134160697 134160811 -11428477 + FLAM_A SINE Alu 1 128 -5 2107 228 39 22 chr10 134160811 134160905 -11428383 + L1MCa LINE L1 3112 3203 -3223 206 209 70 0 chr10 134161047 134161090 -11428198 - MER5A DNA MER1_type -140 49 4 403 167 15 0 chr10 134161369 134161435 -11427853 + Tigger5 DNA MER2_type 1 67 -2256 * 1278 86 17 0 chr10 134161429 134161604 -11427684 + Tigger5 DNA MER2_type 2062 2239 -84 311 289 221 0 chr10 134161651 134161755 -11427533 + L2 LINE L2 3136 3262 -10 21 0 0 0 chr10 134163278 134163299 -11425989 + AT_rich Low_complexity Low_complexity 1 21 0 190 329 47 12 chr10 134163632 134163717 -11425571 + MIR SINE MIR 6 93 -169 458 36 0 0 chr10 134164148 134164203 -11425085 + AluSp/q SINE Alu 239 293 -20 1812 156 3 0 chr10 134164393 134164681 -11424607 - AluSx SINE Alu -23 289 1 1884 98 0 89 chr10 134165792 134166118 -11423170 - AluSg SINE Alu -13 297 1 693 251 44 40 chr10 134166247 134166522 -11422766 + L1M4 LINE L1 4206 4481 -1665 2267 108 0 6 chr10 134166529 134166872 -11422416 + AluSx SINE Alu 1 341 0 2334 61 7 0 chr10 134166877 134167170 -11422118 + AluY SINE Alu 1 295 -16 991 222 133 0 chr10 134167182 134167475 -11421813 + L1M4 LINE L1 4617 4948 -1198 5045 131 57 6 chr10 134167506 134168392 -11420896 + L1MC1 LINE L1 5186 6126 -207 682 184 63 32 chr10 134168388 134168578 -11420710 + L1M4 LINE L1 4963 5158 -988 * 207 0 0 0 chr10 134168581 134168604 -11420684 + (T)n Simple_repeat Simple_repeat 1 23 0 600 100 0 0 chr10 134168760 134168840 -11420448 - AluY SINE Alu -230 81 2 369 138 100 23 chr10 134168840 134168961 -11420327 - L1M4 LINE L1 -812 5334 5200 * 816 249 43 76 chr10 134168931 134169285 -11420003 - L1MEc LINE L1 -3725 3232 2868 2394 66 3 19 chr10 134169285 134169603 -11419685 - AluSp SINE Alu 0 313 1 816 249 43 76 chr10 134169603 134170085 -11419203 - L1MEc LINE L1 -4089 2868 2463 2155 106 3 0 chr10 134170160 134170462 -11418826 - AluY SINE Alu -8 303 1 639 179 81 0 chr10 134170516 134170639 -11418649 - L1MEc LINE L1 -5627 1232 1100 1854 108 9 48 chr10 134170644 134170959 -11418329 + AluSq SINE Alu 1 303 -10 1633 141 0 15 chr10 134171899 134172169 -11417119 + AluSx SINE Alu 1 266 -46 2172 80 17 13 chr10 134172816 134173117 -11416171 + AluSx SINE Alu 1 302 -10 340 176 95 0 chr10 134173604 134173678 -11415610 - MER5A DNA MER1_type -5 184 104 1434 231 51 10 chr10 134173976 134174510 -11414778 - L1M4 LINE L1 -1986 4160 3582 298 224 47 47 chr10 134174510 134174617 -11414671 - Charlie8 DNA MER1_type -2295 122 16 1232 177 5 0 chr10 134174889 134175087 -11414201 + MER20 DNA MER1_type 20 218 -1 432 256 50 38 chr10 134175256 134175416 -11413872 - L1ME LINE L1 -458 5663 5502 2390 72 3 0 chr10 134176349 134176654 -11412634 - AluY SINE Alu -5 306 1 2071 114 0 10 chr10 134176662 134176959 -11412329 - AluSx SINE Alu -18 294 1 22 0 0 0 chr10 134177271 134177293 -11411995 + GC_rich Low_complexity Low_complexity 1 22 0 355 271 3 31 chr10 134177522 134177883 -11411405 + G-rich Low_complexity Low_complexity 1 350 0 1991 108 3 3 chr10 134178535 134178873 -11410415 + AluSx SINE Alu 1 312 0 2195 103 0 0 chr10 134179729 134180020 -11409268 + AluSx SINE Alu 1 291 -21 2346 86 0 0 chr10 134181072 134181374 -11407914 + AluSp SINE Alu 1 302 -11 358 292 47 80 chr10 134181387 134181746 -11407542 + HAL1b LINE L1 54 393 -955 2164 81 0 3 chr10 134181746 134182067 -11407221 - AluY SINE Alu 0 320 1 358 292 47 80 chr10 134182067 134182233 -11407055 + HAL1b LINE L1 393 563 -785 2024 145 0 3 chr10 134182239 134182550 -11406738 + AluSx SINE Alu 1 310 -2 2373 66 0 13 chr10 134182550 134182851 -11406437 + AluY SINE Alu 1 297 -14 1948 115 0 14 chr10 134182851 134183145 -11406143 + AluSx SINE Alu 1 291 -21 1701 157 3 7 chr10 134183866 134184152 -11405136 - AluJb SINE Alu -27 285 1 814 218 159 38 chr10 134184154 134184526 -11404762 + L1MC5 LINE L1 7509 7925 -36 24 0 0 0 chr10 134184533 134184557 -11404731 + AT_rich Low_complexity Low_complexity 1 24 0 1619 177 10 0 chr10 134184628 134184922 -11404366 + AluJo SINE Alu 1 297 -15 802 166 0 14 chr10 134186179 134186324 -11402964 + FLAM_C SINE Alu 1 143 0 2196 79 10 0 chr10 134186619 134186909 -11402379 - AluY SINE Alu -18 293 1 1018 113 0 0 chr10 134186911 134187053 -11402235 - AluY SINE Alu -169 142 1 269 143 143 10 chr10 134187234 134187332 -11401956 + AluSg SINE Alu 2 112 -188 2338 231 143 75 chr10 134188142 134188217 -11401071 + HAL1 LINE L1 1 69 -2438 2046 129 0 0 chr10 134188217 134188511 -11400777 - AluSg SINE Alu -15 295 2 2338 231 143 75 chr10 134188511 134189755 -11399533 + HAL1 LINE L1 69 1227 -1280 2377 77 0 6 chr10 134189755 134190068 -11399220 + AluY SINE Alu 1 311 0 2338 231 143 75 chr10 134190068 134190102 -11399186 + HAL1 LINE L1 1227 1257 -1250 2101 93 30 0 chr10 134190102 134190402 -11398886 + AluY SINE Alu 1 309 -2 2338 231 143 75 chr10 134190402 134190535 -11398753 + HAL1 LINE L1 1257 1590 -917 6022 110 62 64 chr10 134190724 134192292 -11396996 + pTR5 LTR ERV1 375 2438 0 237 243 309 20 chr10 134192349 134192501 -11396787 - MLT1L LTR MaLR -52 563 368 998 143 6 0 chr10 134192519 134192680 -11396608 - AluSp SINE Alu -20 293 132 321 295 38 9 chr10 134192777 134192882 -11396406 - MLT1L LTR MaLR -375 240 133 767 176 65 7 chr10 134193233 134193386 -11395902 + AluSg/x SINE Alu 135 296 -14 2030 206 31 11 chr10 134193410 134193862 -11395426 + LOR1b LTR ERV1 1 461 0 22 56 0 0 chr10 134194506 134194542 -11394746 + GC_rich Low_complexity Low_complexity 1 36 0 2323 66 10 0 chr10 134195541 134195845 -11393443 - AluY SINE Alu -4 307 1 2459 65 0 0 chr10 134196575 134196883 -11392405 - AluY SINE Alu -3 308 1 383 127 63 38 chr10 134197206 134197285 -11392003 - MER20 DNA MER1_type -138 81 1 1706 169 7 3 chr10 134197850 134198146 -11391142 + AluJb SINE Alu 1 297 -15 27 49 0 0 chr10 134198456 134198497 -11390791 + AT_rich Low_complexity Low_complexity 1 41 0 189 325 52 0 chr10 134198727 134198804 -11390484 - MER5A DNA MER1_type -74 115 35 194 325 97 0 chr10 134198988 134199102 -11390186 + L2 LINE L2 2926 3050 -222 26 30 0 0 chr10 134199236 134199269 -11390019 + AT_rich Low_complexity Low_complexity 1 33 0 1006 158 45 54 chr10 134200284 134200505 -11388783 - MER20 DNA MER1_type 0 219 1 1957 124 7 0 chr10 134200611 134200901 -11388387 + AluSg SINE Alu 1 292 -18 1881 113 0 11 chr10 134200907 134201191 -11388097 + AluSx SINE Alu 3 283 -29 1850 108 4 4 chr10 134201916 134202176 -11387112 - AluSx SINE Alu -52 260 1 780 283 97 57 chr10 134202176 134202720 -11386568 + L2 LINE L2 1337 1902 -1412 1096 73 0 0 chr10 134202721 134202858 -11386430 - AluSc SINE Alu -15 294 158 192 216 69 95 chr10 134202952 134203068 -11386220 + L2 LINE L2 3144 3256 -57 627 284 76 13 chr10 134204180 134204416 -11384872 - MIR SINE MIR -9 253 3 2193 102 0 3 chr10 134205318 134205623 -11383665 + AluSg SINE Alu 1 304 -6 1670 169 10 26 chr10 134205900 134206032 -11383256 + AluJb SINE Alu 1 134 -178 2211 98 3 0 chr10 134206032 134206329 -11382959 + AluSp SINE Alu 1 298 -15 1670 169 10 26 chr10 134206329 134206509 -11382779 + AluJb SINE Alu 134 308 -4 1969 138 0 3 chr10 134206553 134206858 -11382430 + AluSg SINE Alu 1 304 -6 2075 106 0 22 chr10 134206998 134207309 -11381979 + AluSx SINE Alu 1 304 -8 546 196 21 0 chr10 134207398 134207495 -11381793 + AluJ/FLAM SINE Alu 1 99 -213 1409 111 9 31 chr10 134207647 134207873 -11381415 + AluSq SINE Alu 93 313 0 6653 196 72 40 chr10 134207873 134209197 -11380091 + L1MC2 LINE L1 2926 4206 -2138 2227 115 0 0 chr10 134209197 134209509 -11379779 + AluSx SINE Alu 1 312 0 6653 196 72 40 chr10 134209509 134209522 -11379766 + L1MC2 LINE L1 4206 4217 -2127 1932 133 0 27 chr10 134209522 134209823 -11379465 + AluSx SINE Alu 1 293 -19 6653 196 72 40 chr10 134209823 134209922 -11379366 + L1MC2 LINE L1 4217 4311 -2033 2464 91 44 11 chr10 134209922 134210285 -11379003 + THE1C LTR MaLR 1 375 0 6653 196 72 40 chr10 134210285 134211001 -11378287 + L1MC2 LINE L1 4311 5003 -1341 2171 105 0 0 chr10 134211001 134211297 -11377991 + AluSx SINE Alu 1 296 -16 6653 196 72 40 chr10 134211297 134212444 -11376844 + L1MC2 LINE L1 5003 6333 -11 549 194 69 6 chr10 134212463 134212623 -11376665 + Charlie5 DNA MER1_type 2416 2585 -27 1413 102 0 0 chr10 134213287 134213473 -11375815 - AluSc SINE Alu -123 186 1 1239 154 0 23 chr10 134213473 134213692 -11375596 + AluSg/x SINE Alu 97 310 0 226 286 18 0 chr10 134213725 134213781 -11375507 - MIR SINE MIR -135 73 17 2199 104 0 0 chr10 134213985 134214293 -11374995 + AluSc SINE Alu 1 308 -1 897 177 6 50 chr10 134214643 134214824 -11374464 + MLT1H LTR MaLR 375 547 -2 22 0 0 0 chr10 134215629 134215651 -11373637 + AT_rich Low_complexity Low_complexity 1 22 0 2035 112 0 0 chr10 134215689 134215967 -11373321 - AluSc SINE Alu -31 278 1 1147 114 0 23 chr10 134216086 134216261 -11373027 - AluSg/x SINE Alu -11 301 131 2040 105 3 23 chr10 134216740 134217046 -11372242 + AluSx SINE Alu 1 300 -12 2157 89 3 3 chr10 134217056 134217371 -11371917 + AluSp SINE Alu 2 316 0 247 70 53 53 chr10 134217595 134217652 -11371636 + AluSc SINE Alu 243 299 0 194 343 14 14 chr10 134217731 134217801 -11371487 - MIR SINE MIR -122 140 71 539 243 140 40 chr10 134218033 134218255 -11371033 + MIR SINE MIR 19 262 0 1872 135 0 13 chr10 134218551 134218855 -11370433 + AluSx SINE Alu 1 300 -12 21 0 0 0 chr10 134219072 134219093 -11370195 + AT_rich Low_complexity Low_complexity 1 21 0 749 171 0 8 chr10 134219102 134219225 -11370063 + FLAM_C SINE Alu 1 122 -21 1650 184 0 3 chr10 134219237 134219544 -11369744 + AluJb SINE Alu 1 306 0 1997 115 3 3 chr10 134219594 134219890 -11369398 - AluSx SINE Alu -16 296 1 1162 232 158 69 chr10 134220097 134220166 -11369122 + L1MC5 LINE L1 6476 6537 -1424 2043 107 7 32 chr10 134220166 134220475 -11368813 + AluSx SINE Alu 1 301 -11 1162 232 158 69 chr10 134220475 134220486 -11368802 + L1MC5 LINE L1 6537 6546 -1415 2201 87 17 0 chr10 134220486 134220775 -11368513 + AluY SINE Alu 1 294 -17 1162 232 158 69 chr10 134220775 134221215 -11368073 + L1MC5 LINE L1 6546 7092 -869 1954 113 10 3 chr10 134221215 134221507 -11367781 + AluSx SINE Alu 1 294 -18 1162 232 158 69 chr10 134221507 134221771 -11367517 + L1MC5 LINE L1 7092 7331 -630 419 136 99 12 chr10 134221801 134221882 -11367406 + L1MC5 LINE L1 7298 7385 -576 745 135 16 24 chr10 134222041 134222190 -11367098 + AluSg/x SINE Alu 171 312 0 4626 158 36 42 chr10 134222643 134223602 -11365686 + LTR5 LTR ERVK 2 955 -14 2348 47 0 7 chr10 134223870 134224168 -11365120 - AluY SINE Alu -15 296 1 2218 55 4 0 chr10 134224190 134224464 -11364824 - AluY SINE Alu -23 288 14 290 275 0 0 chr10 134224515 134224584 -11364704 + Charlie8 DNA MER1_type 2 70 -2347 2124 104 0 19 chr10 134224818 134225136 -11364152 + AluSq SINE Alu 1 312 -1 2182 71 0 11 chr10 134225176 134225478 -11363810 + AluSc SINE Alu 1 299 0 2360 163 32 57 chr10 134225588 134225614 -11363674 + L1M4 LINE L1 4633 4658 -1488 1659 176 0 20 chr10 134225614 134225915 -11363373 + AluJo SINE Alu 1 295 -17 2360 163 32 57 chr10 134225915 134226115 -11363173 + L1M4 LINE L1 4658 4861 -1285 1979 115 0 0 chr10 134226115 134226419 -11362869 - AluSc SINE Alu 0 304 1 2360 163 32 57 chr10 134226419 134226713 -11362575 + L1M4 LINE L1 4861 5142 -1004 271 136 0 0 chr10 134226718 134226762 -11362526 + MLT1D LTR MaLR 462 505 0 1002 269 68 17 chr10 134226766 134227119 -11362169 - LTR33 LTR ERVL -131 390 20 282 276 129 49 chr10 134227313 134227476 -11361812 + MLT1L LTR MaLR 222 397 -218 282 235 198 0 chr10 134227493 134227574 -11361714 + MLT1L LTR MaLR 446 542 -73 1100 107 65 0 chr10 134227582 134227750 -11361538 - AluSc SINE Alu 0 309 131 370 87 0 0 chr10 134228503 134228549 -11360739 + AluSq SINE Alu 150 195 -108 1714 106 12 4 chr10 134228700 134228955 -11360333 - AluSg SINE Alu -37 273 17 1172 58 0 13 chr10 134228957 134229111 -11360177 - AluY SINE Alu -79 232 81 21 0 0 0 chr10 134229127 134229148 -11360140 + AT_rich Low_complexity Low_complexity 1 21 0 959 190 0 0 chr10 134229179 134229353 -11359935 + AluJo SINE Alu 121 294 -18 1988 84 69 0 chr10 134229896 134230170 -11359118 + AluSp SINE Alu 1 293 -20 517 242 120 95 chr10 134230177 134230357 -11358931 - L1MC4a LINE L1 -1868 5940 5766 2343 61 0 3 chr10 134230357 134230653 -11358635 - AluY SINE Alu -16 295 1 1952 114 10 23 chr10 134230662 134230968 -11358320 - AluSx SINE Alu -10 302 1 517 242 120 95 chr10 134230968 134231178 -11358110 - L1MC4a LINE L1 -2049 5759 5530 864 222 96 30 chr10 134231553 134231886 -11357402 + L1MC4 LINE L1 7683 8037 -5 2280 77 3 0 chr10 134233677 134233964 -11355324 + AluSg SINE Alu 1 288 -22 817 142 0 64 chr10 134234019 134234160 -11355128 - FLAM_C SINE Alu 0 133 2 23 54 0 0 chr10 134234499 134234536 -11354752 + AT_rich Low_complexity Low_complexity 1 37 0 2391 68 0 6 chr10 134234708 134235019 -11354269 + AluY SINE Alu 1 309 -2 392 208 0 0 chr10 134235509 134235586 -11353702 - MER116 DNA Mariner -1 79 3 1915 90 83 0 chr10 134236720 134236997 -11352291 + AluSp SINE Alu 3 302 -11 304 196 18 0 chr10 134236998 134237054 -11352234 - L1MC4 LINE L1 -1339 6703 6647 925 191 80 36 chr10 134237058 134237309 -11351979 - L1MB8 LINE L1 -21 6157 5896 406 158 24 43 chr10 134237627 134237880 -11351408 + GA-rich Low_complexity Low_complexity 1 248 0 506 252 9 26 chr10 134237895 134238396 -11350892 + G-rich Low_complexity Low_complexity 1 492 0 837 93 0 53 chr10 134238554 134238704 -11350584 + AluSc SINE Alu 163 304 -5 492 169 127 175 chr10 134238855 134238962 -11350326 - MER5A DNA MER1_type 0 189 78 2026 92 0 116 chr10 134238962 134239297 -11349991 - AluSx SINE Alu -2 300 5 492 169 127 175 chr10 134239297 134239311 -11349977 - MER5A DNA MER1_type -111 78 65 2232 97 0 10 chr10 134239311 134239619 -11349669 - AluY SINE Alu -6 305 1 492 169 127 175 chr10 134239619 134239685 -11349603 - MER5A DNA MER1_type -124 65 10 1289 201 3 67 chr10 134239795 134240108 -11349180 + MLT2B3 LTR ERVL 262 554 0 338 194 54 32 chr10 134240108 134240201 -11349087 - L1MD3 LINE L1 -1458 6537 6443 780 278 111 28 chr10 134240279 134240567 -11348721 - HERV16 LTR ERVL -4683 313 2 493 203 158 30 chr10 134240568 134240701 -11348587 - LTR16A LTR ERVL 0 450 301 461 266 97 0 chr10 134240697 134240810 -11348478 - LTR16A LTR ERVL -311 139 16 * 2180 120 3 0 chr10 134241105 134241448 -11347840 - AluSx SINE Alu 0 344 1 452 274 65 13 chr10 134241650 134241803 -11347485 - HAL1 LINE L1 -815 1692 1532 2130 118 0 3 chr10 134241815 134242119 -11347169 - AluSx SINE Alu -9 303 1 456 162 0 0 chr10 134242187 134242261 -11347027 - MER47A DNA MER2_type -31 335 262 2830 183 25 21 chr10 134242264 134242845 -11346443 + LTR9 LTR ERV1 2 609 -3 1373 154 28 8 chr10 134242849 134243096 -11346192 - MER47A DNA MER2_type -107 259 8 2394 191 63 109 chr10 134243098 134243491 -11345797 + LTR8A LTR ERV1 2 412 -315 189 0 0 0 chr10 134243491 134243512 -11345776 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 646 189 16 0 chr10 134243517 134243639 -11345649 - FLAM_A SINE Alu -9 124 1 2394 191 63 109 chr10 134243639 134244000 -11345288 + LTR8A LTR ERV1 416 727 0 346 268 138 55 chr10 134244010 134244150 -11345138 - L2 LINE L2 -68 3245 3118 1943 142 3 0 chr10 134244150 134244446 -11344842 - AluSx SINE Alu -15 297 1 346 268 138 55 chr10 134244446 134244559 -11344729 - L2 LINE L2 -195 3118 2971 1705 249 100 70 chr10 134244978 134245141 -11344147 + HAL1 LINE L1 1599 1756 -751 2158 101 0 0 chr10 134245141 134245438 -11343850 + AluY SINE Alu 1 297 -14 1705 249 100 70 chr10 134245438 134245479 -11343809 + HAL1 LINE L1 1756 1794 -713 2032 109 3 0 chr10 134245479 134245762 -11343526 + AluSq SINE Alu 11 294 -19 1705 249 100 70 chr10 134245762 134246439 -11342849 + HAL1 LINE L1 1794 2507 0 2204 91 0 3 chr10 134246639 134246936 -11342352 + AluSg SINE Alu 1 296 -14 1430 57 25 198 chr10 134247372 134247690 -11341598 + LTR12 LTR ERV1 12 274 -440 359 257 10 0 chr10 134247691 134247792 -11341496 + LTR30 LTR ERV1 542 643 -79 747 108 0 0 chr10 134247792 134247894 -11341394 + LTR12 LTR ERV1 480 581 -133 1947 69 11 11 chr10 134247894 134248155 -11341133 + AluSx SINE Alu 31 291 -21 1449 164 61 0 chr10 134248222 134248485 -11340803 + AluSg SINE Alu 2 280 -30 1321 132 39 147 chr10 134248802 134249136 -11340152 + AluJb SINE Alu 12 309 -3 2249 73 0 16 chr10 134249300 134249603 -11339685 + AluSg SINE Alu 1 298 -12 1378 157 25 0 chr10 134249658 134249900 -11339388 - L1PA16 LINE L1 -3 6163 5916 346 246 131 84 chr10 134249900 134250091 -11339197 + LTR4 LTR ERV1 1 200 -396 518 229 75 45 chr10 134250304 134250505 -11338783 + LTR4 LTR ERV1 390 596 0 491 366 88 9 chr10 134251408 134251776 -11337512 + L2 LINE L2 2377 2785 -529 1303 197 23 77 chr10 134251776 134252086 -11337202 + AluJo SINE Alu 1 293 -9 491 366 88 9 chr10 134252086 134252149 -11337139 + L2 LINE L2 2785 2842 -472 489 211 70 105 chr10 134252467 134252866 -11336422 + L1MC5 LINE L1 7541 7925 -36 2211 88 0 3 chr10 134253164 134253460 -11335828 + AluSg SINE Alu 3 297 -13 2176 100 3 22 chr10 134253882 134254201 -11335087 + AluSq SINE Alu 1 313 0 1290 187 6 62 chr10 134254344 134254665 -11334623 + AluJo SINE Alu 9 311 -1 2093 87 0 11 chr10 134254667 134254974 -11334314 + AluSq SINE Alu 1 304 0 191 291 156 14 chr10 134255030 134255171 -11334117 + MIR SINE MIR 3 163 -99 22 35 0 0 chr10 134256071 134256100 -11333188 + AT_rich Low_complexity Low_complexity 1 29 0 25 31 0 0 chr10 134256810 134256842 -11332446 + GC_rich Low_complexity Low_complexity 1 32 0 309 150 33 0 chr10 134257028 134257088 -11332200 - LTR8A LTR ERV1 -466 261 200 427 119 0 0 chr10 134257088 134257147 -11332141 - AluS SINE Alu -250 60 2 918 148 55 60 chr10 134257150 134257178 -11332110 - LTR8A LTR ERV1 -516 211 184 2256 90 0 3 chr10 134257178 134257479 -11331809 + AluY SINE Alu 1 300 -11 918 148 55 60 chr10 134257479 134257633 -11331655 - LTR8A LTR ERV1 -543 184 30 690 291 53 54 chr10 134257646 134257912 -11331376 + L1M4 LINE L1 2938 3203 -2943 2135 110 0 7 chr10 134257912 134258211 -11331077 - AluSx SINE Alu -13 299 3 690 291 53 54 chr10 134258211 134258800 -11330488 + L1M4 LINE L1 3203 3792 -2354 1721 185 39 17 chr10 134258802 134259159 -11330129 + MLT1A1 LTR MaLR 1 365 0 259 273 58 32 chr10 134259162 134259316 -11329972 + L1MCc LINE L1 1359 1516 -4907 592 200 70 48 chr10 134259374 134259584 -11329704 + L1MC5 LINE L1 7507 7726 -235 2799 102 0 0 chr10 134259584 134259948 -11329340 + THE1B LTR MaLR 1 364 0 592 200 70 48 chr10 134259948 134260007 -11329281 + L1MC5 LINE L1 7726 7782 -179 1827 133 0 0 chr10 134260011 134260282 -11329006 + AluSx SINE Alu 1 271 -41 233 39 58 19 chr10 134260301 134260353 -11328935 + A-rich Low_complexity Low_complexity 2 55 0 296 225 22 116 chr10 134260365 134260503 -11328785 + L1MC5 LINE L1 7783 7907 -54 2100 75 43 0 chr10 134260734 134261015 -11328273 - AluY SINE Alu -9 302 10 1827 81 4 4 chr10 134261886 134262133 -11327155 + AluSc SINE Alu 60 306 -3 2109 99 3 13 chr10 134262800 134263103 -11326185 - AluSg SINE Alu -10 300 1 201 319 162 26 chr10 134263987 134264486 -11324802 + L2 LINE L2 1907 2473 -841 * 212 247 39 52 chr10 134264462 134264539 -11324749 + L2 LINE L2 3196 3271 -1 2176 178 33 21 chr10 134264588 134264777 -11324511 + MSTB LTR MaLR 1 186 -240 1455 163 48 17 chr10 134264777 134265072 -11324216 + AluJo SINE Alu 1 304 -8 2173 104 3 0 chr10 134265081 134265379 -11323909 + AluSg SINE Alu 1 299 -11 2176 178 33 21 chr10 134265379 134265600 -11323688 + MSTB LTR MaLR 193 426 0 282 298 71 12 chr10 134266114 134266198 -11323090 - MIR3 SINE MIR -7 201 113 446 299 32 6 chr10 134267038 134267195 -11322093 + L1MC4a LINE L1 5778 5938 -1870 1390 185 0 34 chr10 134267197 134267528 -11321760 + AluJb SINE Alu 1 321 0 708 174 8 8 chr10 134267962 134268094 -11321194 - FLAM_C SINE Alu 0 133 2 2012 124 10 3 chr10 134268153 134268460 -11320828 - AluSx SINE Alu -3 309 1 2238 125 54 20 chr10 134269016 134269368 -11319920 + THE1B LTR MaLR 1 364 0 21 0 0 0 chr10 134269873 134269894 -11319394 + AT_rich Low_complexity Low_complexity 1 21 0 1879 151 7 0 chr10 134270052 134270357 -11318931 + AluSx SINE Alu 6 312 0 1627 156 7 31 chr10 134270725 134271014 -11318274 + AluJb SINE Alu 11 292 -20 234 311 92 20 chr10 134271014 134271210 -11318078 + HAL1 LINE L1 1100 1309 -1198 881 205 0 0 chr10 134271217 134271383 -11317905 + FRAM SINE Alu 7 172 -4 28 29 0 0 chr10 134271383 134271418 -11317870 + AT_rich Low_complexity Low_complexity 1 35 0 4392 155 4 13 chr10 134271656 134272373 -11316915 - MER50 LTR ERV1 -23 711 1 2072 115 0 7 chr10 134272597 134272893 -11316395 - AluSc SINE Alu -15 294 1 638 156 121 0 chr10 134272894 134273035 -11316253 - L1MCa LINE L1 -4424 2002 1845 2089 88 14 14 chr10 134273035 134273330 -11315958 - AluSg SINE Alu -15 295 1 2230 83 7 0 chr10 134273847 134274148 -11315140 - AluY SINE Alu -8 303 1 1994 93 10 17 chr10 134274160 134274450 -11314838 - AluSq SINE Alu -25 288 1 248 218 154 91 chr10 134274563 134274673 -11314615 - MIR SINE MIR -40 222 106 875 204 132 26 chr10 134274785 134275013 -11314275 - MIR SINE MIR -15 247 2 327 203 0 0 chr10 134275122 134275181 -11314107 + L2 LINE L2 3254 3312 -1 21 0 0 0 chr10 134275642 134275663 -11313625 + AT_rich Low_complexity Low_complexity 1 21 0 550 173 33 21 chr10 134276338 134276461 -11312827 + L1MD3 LINE L1 7871 8041 -1 1863 134 7 0 chr10 134276464 134276741 -11312547 + AluSx SINE Alu 1 279 -33 911 97 36 6 chr10 134276741 134276906 -11312382 + GA-rich Low_complexity Low_complexity 3 172 0 194 340 0 0 chr10 134277221 134277294 -11311994 + MIR SINE MIR 81 146 -62 285 302 176 19 chr10 134277509 134277668 -11311620 + MIR SINE MIR 8 191 -71 404 172 82 8 chr10 134277806 134277928 -11311360 + AluSq/x SINE Alu 1 131 -182 1376 158 59 24 chr10 134278176 134278360 -11310928 + MSTC LTR MaLR 163 360 -68 1890 113 27 30 chr10 134278360 134278660 -11310628 + AluSx SINE Alu 2 300 -12 1376 158 59 24 chr10 134278660 134278729 -11310559 + MSTC LTR MaLR 360 425 -3 210 71 0 0 chr10 134279239 134279267 -11310021 + (TTTC)n Simple_repeat Simple_repeat 2 29 0 363 176 60 12 chr10 134279269 134279353 -11309935 - LTR30 LTR ERV1 -99 623 364 2179 93 7 3 chr10 134280077 134280377 -11308911 + AluSq SINE Alu 1 301 -12 2165 106 0 3 chr10 134280380 134280683 -11308605 + AluY SINE Alu 2 303 -8 557 257 36 0 chr10 134280696 134280836 -11308452 + MER103 DNA DNA 10 154 -12 213 216 0 0 chr10 134281285 134281322 -11307966 + (TATG)n Simple_repeat Simple_repeat 3 39 0 2086 91 27 0 chr10 134281322 134281618 -11307670 - AluY SINE Alu -7 304 1 1251 93 124 0 chr10 134282197 134282390 -11306898 + AluY SINE Alu 1 217 -94 1787 129 7 4 chr10 134282531 134282803 -11306485 + AluSg SINE Alu 14 286 -24 4659 167 20 33 chr10 134282819 134283696 -11305592 + L1MD1 LINE L1 5305 6171 -71 1580 191 10 3 chr10 134283696 134283990 -11305298 - AluJo SINE Alu -14 298 3 4659 167 20 33 chr10 134283990 134284053 -11305235 + L1MD1 LINE L1 6171 6233 -9 431 261 83 22 chr10 134284053 134284233 -11305055 + Charlie8 DNA MER1_type 91 281 -2136 2939 52 3 0 chr10 134284271 134284634 -11304654 - L1PA5 LINE L1 0 6154 5791 1806 108 54 0 chr10 134284748 134285026 -11304262 + AluSx SINE Alu 1 293 -19 1615 162 0 27 chr10 134285538 134285834 -11303454 + AluJo SINE Alu 11 298 -14 2321 76 0 0 chr10 134286838 134287128 -11302160 - AluSg1 SINE Alu -19 290 1 317 275 154 13 chr10 134287297 134287446 -11301842 - MIR3 SINE MIR -7 201 32 204 40 0 0 chr10 134287738 134287763 -11301525 + (CA)n Simple_repeat Simple_repeat 2 26 0 2290 155 28 2 chr10 134289284 134289684 -11299604 + L1MB5 LINE L1 5752 6161 -13 2464 75 3 18 chr10 134289753 134290085 -11299203 + L1PA8A LINE L1 5805 6131 0 2020 124 6 13 chr10 134290227 134290541 -11298747 - AluSx SINE Alu 0 312 1 1982 153 42 8 chr10 134290952 134291306 -11297982 - MLT1B LTR MaLR -16 374 9 2225 107 0 0 chr10 134291490 134291789 -11297499 - AluSg SINE Alu -11 299 1 1952 138 0 7 chr10 134291789 134292093 -11297195 - AluJb SINE Alu -5 307 5 1925 100 0 0 chr10 134292267 134292506 -11296782 - AluSx SINE Alu -73 239 1 2366 107 0 0 chr10 134292544 134292853 -11296435 - AluSx SINE Alu -3 309 1 210 285 93 70 chr10 134292882 134293054 -11296234 - MIR SINE MIR -31 231 56 2089 102 50 3 chr10 134293565 134293848 -11295440 + AluSq SINE Alu 1 296 -17 213 328 0 0 chr10 134293858 134293916 -11295372 - MIR SINE MIR -118 144 87 544 263 13 13 chr10 134294102 134294254 -11295034 - MIR3 SINE MIR -4 204 53 875 237 235 6 chr10 134294989 134295523 -11293765 + LTR50 LTR ERVL 1 762 -33 2458 95 0 0 chr10 134295523 134295829 -11293459 + AluSq SINE Alu 1 306 -7 475 266 18 0 chr10 134295835 134295948 -11293340 + MER5A DNA MER1_type 72 186 -3 545 243 58 150 chr10 134296207 134296268 -11293020 + LTR35 LTR ERV1 350 415 -203 2553 83 3 0 chr10 134296268 134296628 -11292660 - L1PA13 LINE L1 0 6163 5803 545 243 58 150 chr10 134296628 134296757 -11292531 + LTR35 LTR ERV1 415 426 -192 2069 142 3 3 chr10 134296757 134297060 -11292228 - AluSx SINE Alu -9 303 1 545 243 58 150 chr10 134297060 134297236 -11292052 + LTR35 LTR ERV1 426 617 -1 295 233 0 0 chr10 134297365 134297438 -11291850 + MER116 DNA Mariner 8 80 0 236 236 11 0 chr10 134297923 134297983 -11291305 + MIR SINE MIR 91 150 -112 1982 113 52 47 chr10 134298545 134298907 -11290381 + THE1B LTR MaLR 1 364 0 2286 82 0 0 chr10 134299298 134299578 -11289710 - AluSg SINE Alu -10 300 21 243 0 0 0 chr10 134300208 134300235 -11289053 + (A)n Simple_repeat Simple_repeat 1 27 0 2105 110 36 0 chr10 134300651 134300932 -11288356 + AluSq SINE Alu 1 291 -22 229 323 154 41 chr10 134301690 134301910 -11287378 - L2 LINE L2 -23 3249 3005 22 0 0 0 chr10 134302249 134302271 -11287017 + AT_rich Low_complexity Low_complexity 1 22 0 483 271 52 0 chr10 134302960 134303115 -11286173 - MER103 DNA DNA -3 163 1 215 224 86 17 chr10 134303254 134303312 -11285976 - MER91A DNA MER1_type -11 185 124 920 98 8 0 chr10 134303361 134303483 -11285805 + AluJb SINE Alu 1 123 -189 535 174 8 8 chr10 134303512 134303633 -11285655 + GA-rich Low_complexity Low_complexity 3 123 0 511 264 63 6 chr10 134304211 134304370 -11284918 - MIR SINE MIR -15 247 80 414 157 10 103 chr10 134304713 134304917 -11284371 - AluSg/x SINE Alu -1 311 127 1495 114 0 34 chr10 134305494 134305731 -11283557 - AluY SINE Alu -81 230 2 2189 88 24 0 chr10 134305734 134306028 -11283260 - AluSq SINE Alu -12 301 1 333 215 46 0 chr10 134306036 134306101 -11283187 - MER5A DNA MER1_type -121 68 1 2023 144 3 0 chr10 134306463 134306775 -11282513 + AluSq SINE Alu 1 313 0 2009 183 86 102 chr10 134306980 134307074 -11282214 + MER72 LTR ERV1 1 95 -627 2265 71 0 71 chr10 134307074 134307399 -11281889 + AluSp SINE Alu 1 302 -11 2009 183 86 102 chr10 134307399 134307968 -11281320 + MER72 LTR ERV1 95 653 -69 2324 92 0 3 chr10 134307968 134308260 -11281028 - AluSc SINE Alu -18 291 1 2009 183 86 102 chr10 134308260 134308329 -11280959 + MER72 LTR ERV1 653 722 0 2212 72 6 84 chr10 134308447 134308767 -11280521 - AluSq SINE Alu -16 297 3 184 246 0 18 chr10 134308771 134308828 -11280460 - MER5B DNA MER1_type -116 62 7 204 88 0 29 chr10 134308772 134308806 -11280482 + MER5A DNA MER1_type 129 161 -28 283 291 29 74 chr10 134308842 134309017 -11280271 + MER5A DNA MER1_type 23 189 0 313 324 52 48 chr10 134309115 134309365 -11279923 - L2 LINE L2 -1 3312 3062 852 190 52 0 chr10 134309376 134309550 -11279738 + MER5A DNA MER1_type 7 189 0 338 267 33 129 chr10 134309886 134309916 -11279372 - L2 LINE L2 -704 2610 2579 729 193 37 66 chr10 134309916 134310159 -11279129 - MER106A DNA MER1_type 0 236 1 338 267 33 129 chr10 134310159 134310277 -11279011 - L2 LINE L2 -735 2579 2451 2329 92 17 0 chr10 134310277 134310570 -11278718 + AluSx SINE Alu 1 298 -14 2166 46 88 18 chr10 134310573 134310857 -11278431 + AluY SINE Alu 1 304 -7 338 267 33 129 chr10 134310857 134310943 -11278345 - L2 LINE L2 -865 2449 2394 214 299 55 69 chr10 134311282 134311499 -11277789 - L2 LINE L2 -115 3157 2944 2553 49 3 7 chr10 134311576 134311880 -11277408 - AluY SINE Alu -6 305 3 2055 99 11 32 chr10 134311880 134312162 -11277126 - AluSp SINE Alu -35 278 1 420 250 0 33 chr10 134312486 134312606 -11276682 - MIR SINE MIR -130 132 17 315 302 47 7 chr10 134313112 134313261 -11276027 - L1ME4a LINE L1 -3 6118 5964 34 55 0 0 chr10 134313325 134313380 -11275908 + AT_rich Low_complexity Low_complexity 1 55 0 270 0 0 0 chr10 134313380 134313410 -11275878 + (CA)n Simple_repeat Simple_repeat 2 31 0 185 0 0 39 chr10 134313421 134313432 -11275856 + (TG)n Simple_repeat Simple_repeat 2 12 -14 2368 104 0 0 chr10 134313432 134313729 -11275559 + AluSx SINE Alu 1 297 -15 185 0 0 39 chr10 134313729 134313743 -11275545 + (TG)n Simple_repeat Simple_repeat 12 26 0 1701 166 60 21 chr10 134313770 134313966 -11275322 - L1MC2 LINE L1 -2 6342 6155 877 223 35 0 chr10 134313966 134314168 -11275120 - MER6B DNA MER2_type 0 210 2 1701 166 60 21 chr10 134314168 134314356 -11274932 - L1MC2 LINE L1 -189 6155 5943 872 193 0 0 chr10 134314440 134314616 -11274672 - L1ME3 LINE L1 -108 6054 5879 577 104 21 0 chr10 134314646 134314742 -11274546 - L1MB2 LINE L1 -1 6170 6073 5004 223 79 46 chr10 134314758 134315653 -11273635 - L1MEc LINE L1 -3065 3150 2286 2097 123 0 45 chr10 134315653 134315826 -11273462 - AluSx SINE Alu -16 296 142 2248 109 14 0 chr10 134315826 134316119 -11273169 - AluSg SINE Alu -13 297 1 2097 123 0 45 chr10 134316119 134316255 -11273033 - AluSx SINE Alu -170 142 1 5004 223 79 46 chr10 134316255 134317061 -11272227 - L1MEc LINE L1 -3929 2286 1508 2369 89 3 0 chr10 134317061 134317352 -11271936 - AluSx SINE Alu -12 300 9 5004 223 79 46 chr10 134317352 134318226 -11271062 - L1MEc LINE L1 -4707 1508 414 1632 118 22 112 chr10 134318226 134318548 -11270740 - AluYb8 SINE Alu -19 299 7 5004 223 79 46 chr10 134318548 134318780 -11270508 - L1MEc LINE L1 -5801 414 191 2476 87 0 3 chr10 134318788 134319098 -11270190 - AluY SINE Alu -2 309 1 1625 202 3 43 chr10 134319883 134320029 -11269259 + AluJb SINE Alu 1 151 -161 2459 82 7 0 chr10 134320029 134320333 -11268955 + AluSp SINE Alu 1 306 -7 1625 202 3 43 chr10 134320333 134320508 -11268780 + AluJb SINE Alu 151 309 -3 1960 100 0 50 chr10 134321149 134321428 -11267860 + AluSq SINE Alu 1 265 -48 223 260 39 13 chr10 134322939 134323016 -11266272 - L2 LINE L2 -204 3068 2990 2056 144 6 13 chr10 134323550 134323863 -11265425 - AluSx SINE Alu -1 311 1 2600 72 0 0 chr10 134324055 134324362 -11264926 - AluY SINE Alu -4 307 1 2246 108 3 0 chr10 134324362 134324659 -11264629 - AluSx SINE Alu -14 298 1 258 302 176 19 chr10 134324794 134324953 -11264335 - MIR SINE MIR -71 191 8 191 340 0 0 chr10 134325168 134325241 -11264047 - MIR SINE MIR -62 146 81 2502 74 7 0 chr10 134325776 134326072 -11263216 + AluSg SINE Alu 1 298 -12 287 283 105 26 chr10 134326081 134326233 -11263055 - MIR3 SINE MIR -21 187 24 263 284 39 10 chr10 134326400 134326502 -11262786 - L2 LINE L2 -31 3241 3137 282 299 109 7 chr10 134326544 134326691 -11262597 - L2 LINE L2 -16 3297 3136 1030 132 99 9 chr10 134326713 134326925 -11262363 - L1MB3 LINE L1 0 6183 5953 213 121 0 0 chr10 134326925 134326958 -11262330 + (TTCC)n Simple_repeat Simple_repeat 2 34 0 815 176 0 0 chr10 134326959 134327084 -11262204 - FRAM SINE Alu -32 144 20 1780 118 3 40 chr10 134327255 134327552 -11261736 - AluSg SINE Alu -24 286 1 2346 97 3 3 chr10 134327554 134327863 -11261425 - AluY SINE Alu -1 310 2 1488 95 0 5 chr10 134327869 134328058 -11261230 - AluSg/x SINE Alu -10 302 115 1687 168 39 0 chr10 134328058 134328319 -11260969 - L1MB3 LINE L1 -429 5751 5475 194 0 39 0 chr10 134328319 134328345 -11260943 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1687 168 39 0 chr10 134328345 134328392 -11260896 - L1MB3 LINE L1 -705 5475 5431 349 331 82 65 chr10 134328396 134328717 -11260571 - L2 LINE L2 -240 3073 2748 279 0 0 0 chr10 134329282 134329313 -11259975 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 317 175 0 0 chr10 134329359 134329416 -11259872 - LTR36 LTR ERV1 0 611 555 1386 141 0 48 chr10 134329418 134329667 -11259621 + AluJb SINE Alu 72 308 -4 2528 159 49 52 chr10 134329667 134330238 -11259050 - LTR36 LTR ERV1 -42 569 1 2175 93 3 14 chr10 134330337 134330627 -11258661 - AluY SINE Alu -3 308 22 1797 157 30 0 chr10 134333756 134334043 -11255245 - AluJo SINE Alu 0 301 7 2457 69 0 29 chr10 134334540 134334846 -11254442 - AluY SINE Alu -14 297 1 24 0 0 0 chr10 134334856 134334880 -11254408 + AT_rich Low_complexity Low_complexity 1 24 0 687 213 60 37 chr10 134341982 134341996 -11247292 - L1MB7 LINE L1 -2 6182 6170 1981 128 35 14 chr10 134341996 134342285 -11247003 + AluJb SINE Alu 3 297 -15 687 213 60 37 chr10 134342285 134342486 -11246802 - L1MB7 LINE L1 -14 6170 5962 32 43 0 0 chr10 134343328 134343374 -11245914 + AT_rich Low_complexity Low_complexity 1 46 0 2549 60 0 13 chr10 134343420 134343734 -11245554 + AluY SINE Alu 1 310 -1 794 200 118 5 chr10 134343938 134344133 -11245155 - MER34C LTR ERV1 -368 217 1 997 198 6 0 chr10 134344316 134344483 -11244805 + FAM SINE Alu 3 170 -5 2570 47 0 7 chr10 134345218 134345519 -11243769 + AluY SINE Alu 1 299 -12 1122 178 10 0 chr10 134346433 134346630 -11242658 - MER20 DNA MER1_type -1 218 20 260 204 45 45 chr10 134346921 134347009 -11242279 + Charlie8 DNA MER1_type 35 122 -2295 1051 243 39 9 chr10 134347009 134347539 -11241749 + L1M4 LINE L1 3582 4160 -1986 911 209 4 43 chr10 134348095 134348329 -11240959 - AluJb SINE Alu -3 309 85 328 20 41 0 chr10 134349281 134349330 -11239958 + (CAA)n Simple_repeat Simple_repeat 1 51 0 2460 102 0 3 chr10 134350192 134350505 -11238783 + AluSx SINE Alu 1 312 0 2471 88 0 0 chr10 134351304 134351610 -11237678 - AluSq SINE Alu -7 306 1 1472 87 22 0 chr10 134352928 134353111 -11236177 - AluSg SINE Alu -123 187 1 2290 95 0 46 chr10 134353606 134353933 -11235355 - AluSx SINE Alu 0 312 1 2973 87 65 98 chr10 134353934 134354180 -11235108 - L1PB1 LINE L1 -179 5972 5720 2239 106 10 7 chr10 134354180 134354483 -11234805 - AluSc SINE Alu -5 304 1 2192 92 24 3 chr10 134354483 134354775 -11234513 - AluSg SINE Alu -12 298 1 2973 87 65 98 chr10 134354775 134355111 -11234177 - L1PB1 LINE L1 -429 5722 5408 400 281 41 16 chr10 134355111 134355232 -11234056 + MER5A DNA MER1_type 64 187 -2 508 292 34 0 chr10 134355372 134355550 -11233738 + L1MC5 LINE L1 7710 7893 -68 309 308 17 58 chr10 134356029 134356149 -11233139 - MIR SINE MIR -74 134 20 234 244 0 0 chr10 134356802 134356847 -11232441 + (CA)n Simple_repeat Simple_repeat 2 46 0 402 254 121 0 chr10 134356997 134357122 -11232166 - MER20B DNA MER1_type -21 198 56 444 19 0 0 chr10 134357248 134357301 -11231987 + (CA)n Simple_repeat Simple_repeat 1 53 0 321 319 139 12 chr10 134357490 134357656 -11231632 + MIR3 SINE MIR 8 194 -14 21 36 0 0 chr10 134358872 134358900 -11230388 + GC_rich Low_complexity Low_complexity 1 28 0 956 247 106 43 chr10 134359290 134359687 -11229601 + MLT1L LTR MaLR 184 605 -10 306 179 0 0 chr10 134360058 134360114 -11229174 + L1P5 LINE L1 5718 5773 -378 2399 87 0 0 chr10 134360127 134360426 -11228862 + AluSq SINE Alu 1 299 -14 258 32 0 0 chr10 134360439 134360470 -11228818 + (CA)n Simple_repeat Simple_repeat 2 32 0 2151 99 7 7 chr10 134360492 134360820 -11228468 + AluSq SINE Alu 1 328 0 233 258 125 33 chr10 134361045 134361165 -11228123 + L1ME4a LINE L1 5989 6119 -2 263 321 131 29 chr10 134361622 134361759 -11227529 + MIR3 SINE MIR 36 186 -22 966 233 46 0 chr10 134362652 134362871 -11226417 - MLT1A1 LTR MaLR 0 365 137 1926 138 7 0 chr10 134362873 134363155 -11226133 - AluSp SINE Alu 0 313 30 187 241 7 35 chr10 134363173 134363314 -11225974 + CT-rich Low_complexity Low_complexity 1 137 0 2391 90 3 0 chr10 134363588 134363888 -11225400 - AluSx SINE Alu -11 301 1 502 264 124 26 chr10 134365214 134365407 -11223881 - MIR SINE MIR -21 241 30 202 269 19 0 chr10 134365795 134365847 -11223441 + (CCCA)n Simple_repeat Simple_repeat 3 55 0 187 323 63 38 chr10 134366079 134366237 -11223051 - MIR SINE MIR -60 202 41 203 192 19 58 chr10 134366448 134366500 -11222788 + CT-rich Low_complexity Low_complexity 1 50 0 1963 156 0 31 chr10 134366505 134366826 -11222462 - AluJo SINE Alu 0 312 2 2115 106 4 0 chr10 134367158 134367431 -11221857 - AluSx SINE Alu -13 299 26 237 337 219 16 chr10 134368204 134368450 -11220838 - L2 LINE L2 0 3272 2977 2212 125 0 6 chr10 134368570 134368883 -11220405 + AluSx SINE Alu 1 311 -1 420 260 63 0 chr10 134369102 134369229 -11220059 - L2 LINE L2 0 3313 3179 369 378 64 0 chr10 134369743 134369976 -11219312 - MIR SINE MIR 0 262 15 192 152 0 0 chr10 134370124 134370157 -11219131 + CT-rich Low_complexity Low_complexity 1 33 0 669 231 0 14 chr10 134370937 134371084 -11218204 + MER5B DNA MER1_type 28 172 -6 741 175 0 0 chr10 134371163 134371283 -11218005 + Tigger3(Golem) DNA MER2_type 2909 3028 -1 862 112 7 99 chr10 134371331 134371369 -11217919 - FLAM_C SINE Alu -174 138 98 2407 81 0 41 chr10 134371369 134371689 -11217599 + AluY SINE Alu 1 307 -4 862 112 7 99 chr10 134371689 134371802 -11217486 - FLAM_C SINE Alu -214 98 1 382 252 149 0 chr10 134371807 134371914 -11217374 - L2 LINE L2 -3 3269 3147 * 526 272 131 10 chr10 134371909 134372115 -11217173 - MIR SINE MIR 0 262 32 207 69 0 0 chr10 134372345 134372374 -11216914 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 1718 154 33 0 chr10 134372376 134372648 -11216640 - AluJb SINE Alu -31 281 1 960 146 42 46 chr10 134372796 134373036 -11216252 + MER33 DNA MER1_type 58 296 -28 494 244 180 29 chr10 134373463 134373635 -11215653 + MIR SINE MIR 26 223 -39 572 330 46 9 chr10 134375223 134375441 -11213847 + MIR SINE MIR 37 262 0 1649 201 0 16 chr10 134375885 134376189 -11213099 - AluJo SINE Alu -13 299 1 219 313 51 51 chr10 134376592 134376762 -11212526 - MIR3 SINE MIR -20 188 23 281 307 107 7 chr10 134376917 134377057 -11212231 + MIR SINE MIR 77 230 -32 429 297 14 14 chr10 134377120 134377258 -11212030 - MIR SINE MIR -79 183 46 869 226 9 28 chr10 134377345 134377557 -11211731 + MER3 DNA MER1_type 1 208 -1 835 93 0 0 chr10 134378116 134378223 -11211065 - AluSq/x SINE Alu -205 107 1 517 307 63 13 chr10 134378224 134378462 -11210826 - L1ME4a LINE L1 -296 5825 5576 2148 108 7 0 chr10 134378884 134379161 -11210127 - AluSx SINE Alu -33 279 1 271 340 10 10 chr10 134379166 134379266 -11210022 + L2 LINE L2 2854 2953 -319 788 151 0 8 chr10 134379322 134379448 -11209840 - FLAM_C SINE Alu -8 125 1 973 234 27 14 chr10 134379484 134379706 -11209582 + MIR SINE MIR 8 232 -30 1017 182 0 0 chr10 134379897 134380067 -11209221 + AluJb SINE Alu 137 306 -6 287 149 96 11 chr10 134380354 134380448 -11208840 - MER5C DNA MER1_type -24 300 199 432 181 12 0 chr10 134380458 134380541 -11208747 - MER20 DNA MER1_type -2 217 134 311 167 0 0 chr10 134380551 134380605 -11208683 - MER5C DNA MER1_type -165 159 106 2123 143 7 0 chr10 134380605 134380949 -11208339 + AluSx SINE Alu 1 346 0 328 242 0 0 chr10 134380956 134381022 -11208266 - MER5C DNA MER1_type -210 114 49 2017 125 0 10 chr10 134381129 134381425 -11207863 + AluSq SINE Alu 1 293 -20 210 71 0 0 chr10 134381667 134381695 -11207593 + (TCCCC)n Simple_repeat Simple_repeat 4 31 0 258 350 0 17 chr10 134382294 134382414 -11206874 + (TATATG)n Simple_repeat Simple_repeat 3 120 0 354 305 32 0 chr10 134382453 134382548 -11206740 - L2 LINE L2 -27 3245 3148 259 276 70 110 chr10 134382534 134382762 -11206526 + L2 LINE L2 3014 3232 -40 * 2268 97 0 23 chr10 134383033 134383343 -11205945 - AluSx SINE Alu -9 303 1 187 275 0 0 chr10 134383775 134383815 -11205473 - MIR SINE MIR -155 107 68 593 270 37 17 chr10 134383839 134384060 -11205228 - MIR SINE MIR -19 243 23 1635 234 124 7 chr10 134384512 134384956 -11204332 - MER82 DNA MER2_type 0 653 158 226 206 48 16 chr10 134385190 134385253 -11204035 + L1MC4 LINE L1 6481 6545 -1497 1798 246 111 84 chr10 134385375 134385452 -11203836 + L1MC4 LINE L1 6924 6997 -1045 279 0 0 0 chr10 134385452 134385483 -11203805 + (CA)n Simple_repeat Simple_repeat 2 32 0 1798 246 111 84 chr10 134385483 134385722 -11203566 + L1MC4 LINE L1 6997 7228 -814 2421 83 0 10 chr10 134385722 134386023 -11203265 + AluSc SINE Alu 1 298 -11 1798 246 111 84 chr10 134386023 134386300 -11202988 + L1MC4 LINE L1 7228 7496 -546 1957 129 3 30 chr10 134386300 134386602 -11202686 + AluJo SINE Alu 1 294 -18 1798 246 111 84 chr10 134386602 134387093 -11202195 + L1MC4 LINE L1 7496 8040 -2 2403 86 7 0 chr10 134387688 134387990 -11201298 + AluSq SINE Alu 1 304 -9 1946 133 21 7 chr10 134388495 134388780 -11200508 + AluSx SINE Alu 1 289 -23 24 53 0 0 chr10 134389291 134389329 -11199959 + AT_rich Low_complexity Low_complexity 1 38 0 2399 60 0 3 chr10 134389419 134389726 -11199562 - AluY SINE Alu 0 306 1 441 336 43 24 chr10 134390297 134390550 -11198738 + MIR SINE MIR 3 260 -2 2111 108 23 19 chr10 134390740 134391047 -11198241 + AluSx SINE Alu 1 308 -4 244 253 63 42 chr10 134391074 134391169 -11198119 - L2 LINE L2 -12 3301 3205 246 267 29 29 chr10 134391366 134391471 -11197817 + MIR3 SINE MIR 94 198 -10 1930 163 0 17 chr10 134391867 134392167 -11197121 - AluSx SINE Alu -17 295 1 629 220 75 45 chr10 134392426 134392615 -11196673 + MIR SINE MIR 3 200 -62 981 168 37 9 chr10 134392615 134392829 -11196459 + L1MB2 LINE L1 5952 6171 0 189 329 43 0 chr10 134393261 134393331 -11195957 - L2 LINE L2 0 3272 3200 2284 118 0 3 chr10 134393484 134393797 -11195491 + AluSx SINE Alu 1 312 0 2198 109 7 3 chr10 134394304 134394607 -11194681 + AluSx SINE Alu 1 304 -8 28 0 0 0 chr10 134394817 134394845 -11194443 + AT_rich Low_complexity Low_complexity 1 28 0 807 185 51 0 chr10 134395280 134395437 -11193851 + AluJb SINE Alu 126 290 -22 348 184 128 18 chr10 134395626 134395735 -11193553 - MER5A DNA MER1_type -9 180 60 2141 134 7 7 chr10 134396182 134396487 -11192801 + AluSq SINE Alu 1 305 -8 240 210 145 0 chr10 134396705 134396767 -11192521 - MER116 DNA Mariner -3 77 7 433 261 35 28 chr10 134398113 134398255 -11191033 + MER117 DNA MER1_type 1 143 -54 243 300 106 19 chr10 134398806 134398966 -11190322 - L2 LINE L2 -509 2805 2632 256 156 0 0 chr10 134401887 134401932 -11187356 - MLT2D LTR ERVL -7 547 503 1933 164 39 6 chr10 134401970 134402329 -11186959 - MLT2D LTR ERVL -41 373 3 2086 199 38 23 chr10 134403072 134403598 -11185690 + L1ME1 LINE L1 5581 6156 -10 390 269 90 72 chr10 134403896 134404231 -11185057 - L2 LINE L2 -7 3265 2925 3649 149 32 30 chr10 134404259 134404299 -11184989 - L1MC3 LINE L1 -153 7632 7594 2714 118 26 0 chr10 134404299 134404716 -11184572 + MSTC LTR MaLR 1 428 0 3649 149 32 30 chr10 134404716 134405106 -11184182 - L1MC3 LINE L1 -191 7594 7198 2197 119 0 0 chr10 134405106 134405399 -11183889 - AluSx SINE Alu -19 293 1 3649 149 32 30 chr10 134405399 134405692 -11183596 - L1MC3 LINE L1 -587 7198 6907 563 265 66 6 chr10 134407344 134407510 -11181778 + MIR SINE MIR 70 245 -17 440 330 19 28 chr10 134407661 134407876 -11181412 - L2 LINE L2 -189 3083 2871 302 211 40 0 chr10 134408211 134408287 -11181001 - L2 LINE L2 0 3272 3194 519 284 18 68 chr10 134409322 134409390 -11179898 - MIR SINE MIR -1 261 191 2031 118 20 20 chr10 134409390 134409694 -11179594 - AluSx SINE Alu -8 304 1 519 284 18 68 chr10 134409694 134409847 -11179441 - MIR SINE MIR -71 191 51 568 257 18 41 chr10 134410045 134410216 -11179072 - MIR SINE MIR -10 252 86 2636 53 0 0 chr10 134412238 134412541 -11176747 - AluY SINE Alu -8 303 1 2424 84 0 3 chr10 134412632 134412928 -11176360 - AluY SINE Alu -16 295 1 1804 139 46 11 chr10 134413246 134413526 -11175762 + AluJb SINE Alu 1 290 -22 198 103 0 0 chr10 134414419 134414448 -11174840 + (TCCC)n Simple_repeat Simple_repeat 2 30 0 2310 94 0 23 chr10 134414529 134414837 -11174451 + AluSx SINE Alu 11 311 -1 1302 202 38 62 chr10 134416793 134417134 -11172154 - MLT1A2 LTR MaLR -41 333 1 1953 145 30 7 chr10 134417346 134417649 -11171639 - AluJo SINE Alu -2 310 1 335 382 70 0 chr10 134417843 134418029 -11171259 - MIR SINE MIR -45 217 19 23 54 0 0 chr10 134420131 134420168 -11169120 + GC_rich Low_complexity Low_complexity 1 37 0 22 35 0 0 chr10 134420238 134420267 -11169021 + GC_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr10 134422702 134422727 -11166561 + AT_rich Low_complexity Low_complexity 1 25 0 419 293 79 0 chr10 134422981 134423121 -11166167 + MER5A DNA MER1_type 33 183 -6 1692 188 0 52 chr10 134424294 134424618 -11164670 - AluJb SINE Alu -5 307 1 658 232 205 0 chr10 134425815 134426000 -11163288 - MER58A DNA MER1_type -1 223 1 453 245 57 137 chr10 134426019 134426168 -11163120 + L2 LINE L2 2130 2289 -1025 2178 138 0 0 chr10 134426168 134426464 -11162824 - AluJb SINE Alu -16 296 1 453 245 57 137 chr10 134426464 134426665 -11162623 + L2 LINE L2 2289 2452 -862 1685 136 21 98 chr10 134426677 134427015 -11162273 - AluYb8 SINE Alu -6 312 1 230 318 168 5 chr10 134427056 134427270 -11162018 + L2 LINE L2 2695 2943 -371 280 238 0 0 chr10 134429456 134429519 -11159769 - MLT1K LTR MaLR -16 572 510 183 80 0 0 chr10 134430362 134430387 -11158901 + (GGCTG)n Simple_repeat Simple_repeat 3 27 0 1304 148 46 83 chr10 134431041 134431366 -11157922 - L1MA8 LINE L1 -72 6219 5907 1762 152 57 17 chr10 134431372 134431668 -11157620 - AluJb SINE Alu -4 308 1 1615 160 14 59 chr10 134432197 134432485 -11156803 + AluJb SINE Alu 1 275 -37 405 0 0 0 chr10 134432486 134432531 -11156757 + (TC)n Simple_repeat Simple_repeat 2 46 0 261 0 0 0 chr10 134432530 134432559 -11156729 + (TA)n Simple_repeat Simple_repeat 1 29 0 * 322 224 24 24 chr10 134433118 134433203 -11156085 - MER34 LTR ERV1 0 542 458 1561 152 31 4 chr10 134433327 134433583 -11155705 + AluJb SINE Alu 32 294 -18 861 155 7 34 chr10 134434353 134434494 -11154794 + AluJo SINE Alu 1 139 -173 1818 147 3 24 chr10 134434494 134434787 -11154501 + AluJo SINE Alu 4 290 -22 2290 90 7 7 chr10 134435031 134435330 -11153958 - AluY SINE Alu -12 299 1 2274 93 0 26 chr10 134435423 134435736 -11153552 - AluSx SINE Alu -7 305 1 454 297 65 0 chr10 134436133 134436288 -11153000 - MIR SINE MIR -19 243 79 2157 125 0 28 chr10 134437605 134437925 -11151363 + AluSx SINE Alu 1 311 -1 213 296 0 25 chr10 134439362 134439443 -11149845 + (TATG)n Simple_repeat Simple_repeat 2 80 0 851 133 0 15 chr10 134439721 134439856 -11149432 - FLAM_C SINE Alu 0 133 1 2258 107 0 35 chr10 134439868 134440186 -11149102 - AluSp SINE Alu -6 307 1 2267 113 7 0 chr10 134440617 134440918 -11148370 - AluSq SINE Alu -10 303 1 436 183 0 0 chr10 134440964 134441035 -11148253 + AluJ/FLAM SINE Alu 2 72 -240 872 177 7 7 chr10 134441035 134441182 -11148106 + AluJo/FRAM SINE Alu 136 282 -30 2200 125 3 0 chr10 134441199 134441502 -11147786 - AluSx SINE Alu -8 304 1 2214 131 0 3 chr10 134442169 134442481 -11146807 - AluSx SINE Alu -1 311 1 204 296 80 0 chr10 134442565 134442653 -11146635 - MIR SINE MIR -109 153 59 2087 113 3 34 chr10 134442961 134443279 -11146009 - AluSx SINE Alu 0 309 1 396 241 105 30 chr10 134444530 134444663 -11144625 + MIR3 SINE MIR 54 196 -12 197 132 26 0 chr10 134444822 134444860 -11144428 + (TATG)n Simple_repeat Simple_repeat 4 42 0 367 323 8 24 chr10 134445661 134445788 -11143500 + MIR SINE MIR 20 144 -118 856 194 12 12 chr10 134445812 134445972 -11143316 - FRAM SINE Alu -18 158 1 1718 71 18 0 chr10 134446102 134446328 -11142960 + MER30 DNA MER1_type 1 230 0 1888 173 3 22 chr10 134448596 134448914 -11140374 - AluJo SINE Alu 0 312 1 204 319 178 12 chr10 134449154 134449323 -11139965 - L2 LINE L2 0 3272 3076 2142 75 8 0 chr10 134451389 134451654 -11137634 + AluY SINE Alu 45 311 0 2353 99 0 0 chr10 134451669 134451971 -11137317 + AluSx SINE Alu 1 302 -10 256 313 20 10 chr10 134452989 134453088 -11136200 + MIR3 SINE MIR 106 205 -3 1663 184 28 8 chr10 134454375 134454733 -11134555 - MLT1A1 LTR MaLR 0 365 1 265 281 0 12 chr10 134456528 134456610 -11132678 - MIR SINE MIR -125 137 57 547 306 76 46 chr10 134456715 134457019 -11132269 - HAL1 LINE L1 -335 2172 1860 581 157 10 0 chr10 134457025 134457127 -11132161 - AluJb SINE Alu -19 293 191 852 199 35 10 chr10 134457127 134457328 -11131960 - HAL1 LINE L1 -644 1863 1658 11035 38 1 107 chr10 134457351 134458894 -11130394 - SVA Other Other -2 1384 5 551 219 8 0 chr10 134459243 134459362 -11129926 + FLAM_C SINE Alu 2 121 -22 199 360 53 9 chr10 134459723 134459837 -11129451 + MIR SINE MIR 74 192 -70 1383 202 45 14 chr10 134460995 134461282 -11128006 + AluJo SINE Alu 1 296 -16 1296 184 137 6 chr10 134462764 134463106 -11126182 + MLT1B LTR MaLR 1 387 -3 198 337 36 24 chr10 134463292 134463375 -11125913 + L2 LINE L2 3189 3272 0 2189 133 7 0 chr10 134463459 134463752 -11125536 + AluSx SINE Alu 1 295 -17 942 191 14 18 chr10 134463861 134464081 -11125207 + MER20 DNA MER1_type 1 219 0 646 156 181 6 chr10 134465001 134465161 -11124127 + MER53 DNA DNA 1 188 -1 1180 285 106 11 chr10 134465835 134466130 -11123158 + L2 LINE L2 2826 3178 -135 2191 109 0 20 chr10 134466130 134466434 -11122854 - AluSx SINE Alu -14 298 1 1180 285 106 11 chr10 134466434 134466580 -11122708 + L2 LINE L2 3178 3309 -4 193 295 158 0 chr10 134466606 134466701 -11122587 - MIR SINE MIR -110 152 43 2309 93 10 3 chr10 134473871 134474172 -11115116 - AluSq SINE Alu 0 313 11 2418 97 0 0 chr10 134474386 134474685 -11114603 - AluSg SINE Alu -11 299 1 1807 162 10 26 chr10 134475174 134475483 -11113805 + AluSx SINE Alu 1 304 -8 296 305 126 0 chr10 134475793 134475944 -11113344 + L2 LINE L2 3141 3310 -3 2388 110 0 0 chr10 134476197 134476507 -11112781 + AluSx SINE Alu 1 310 -2 263 280 122 36 chr10 134477200 134477408 -11111880 - MIR SINE MIR -12 250 18 186 273 73 0 chr10 134479411 134479466 -11109822 - MIR3 SINE MIR -7 201 143 1880 129 72 0 chr10 134479495 134479773 -11109515 - AluSx SINE Alu -10 302 5 317 313 26 17 chr10 134480323 134480438 -11108850 + L2 LINE L2 3150 3265 -7 269 275 0 0 chr10 134482463 134482532 -11106756 + L2 LINE L2 3203 3271 -1 845 142 0 15 chr10 134483043 134483177 -11106111 - FLAM_C SINE Alu -1 132 1 438 351 6 6 chr10 134483345 134483510 -11105778 + MIR SINE MIR 28 192 -70 404 267 118 28 chr10 134483884 134484063 -11105225 - MIR SINE MIR -28 234 45 207 242 77 55 chr10 134485204 134485295 -11103993 - L2 LINE L2 -1 3312 3220 200 217 0 22 chr10 134486539 134486585 -11102703 + GA-rich Low_complexity Low_complexity 3 47 0 537 254 42 54 chr10 134487047 134487307 -11101981 - LTR37B LTR ERV1 -3 465 209 255 211 101 6 chr10 134487460 134487538 -11101750 - MER58B DNA MER1_type -2091 329 260 204 97 0 0 chr10 134487538 134487569 -11101719 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 255 211 101 6 chr10 134487569 134487617 -11101671 - MER58B DNA MER1_type -2160 260 2 366 183 14 0 chr10 134487630 134487701 -11101587 - LTR37B LTR ERV1 -396 72 1 366 352 49 6 chr10 134487846 134488008 -11101280 + MIR SINE MIR 80 248 -14 961 172 0 0 chr10 134488191 134488336 -11100952 + FRAM SINE Alu 1 145 -31 2267 107 0 3 chr10 134491594 134491884 -11097404 - AluSx SINE Alu -23 289 1 762 124 0 83 chr10 134491889 134492034 -11097254 - FLAM_C SINE Alu 0 133 1 2316 91 0 10 chr10 134494950 134495247 -11094041 - AluSq SINE Alu -19 294 1 422 222 10 0 chr10 134495300 134495399 -11093889 - L1MC4a LINE L1 -1979 5829 5730 2315 99 0 19 chr10 134495497 134495809 -11093479 - AluSq SINE Alu -7 306 1 322 215 141 33 chr10 134496328 134496449 -11092839 + MIR SINE MIR 27 160 -102 310 339 9 0 chr10 134496455 134496564 -11092724 + MIR SINE MIR 3 112 -150 230 290 58 58 chr10 134497112 134497267 -11092021 - MIR SINE MIR -70 192 38 204 333 65 22 chr10 134497635 134497773 -11091515 - L2 LINE L2 -213 3059 2916 1629 218 3 10 chr10 134497890 134498193 -11091095 - AluJo SINE Alu -6 306 6 622 258 0 0 chr10 134498201 134498333 -11090955 - FLAM_A SINE Alu 0 133 2 406 296 0 0 chr10 134499063 134499178 -11090110 - MER117 DNA MER1_type -34 163 49 201 74 0 0 chr10 134499243 134499270 -11090018 + (TTTTC)n Simple_repeat Simple_repeat 2 28 0 26 0 0 0 chr10 134499363 134499389 -11089899 + AT_rich Low_complexity Low_complexity 1 26 0 750 174 0 8 chr10 134499410 134499542 -11089746 - FLAM_C SINE Alu -2 131 1 2142 131 7 0 chr10 134499554 134499851 -11089437 - AluSx SINE Alu -13 299 1 1413 208 140 53 chr10 134501520 134501802 -11087486 + MER90 LTR ERV1 1 257 -318 1265 39 0 0 chr10 134501802 134501956 -11087332 - L1PA4 LINE L1 -3 6152 5999 1413 208 140 53 chr10 134501956 134502202 -11087086 + MER90 LTR ERV1 257 575 0 358 261 102 81 chr10 134502202 134502485 -11086803 + L1MC4a LINE L1 5612 5903 -218 309 230 40 20 chr10 134502833 134502933 -11086355 + AluSc SINE Alu 198 299 0 2276 114 3 0 chr10 134502997 134503294 -11085994 + AluSx SINE Alu 3 300 -12 243 312 13 26 chr10 134503310 134503387 -11085901 + MIR SINE MIR 70 145 -63 2598 158 48 50 chr10 134503882 134504440 -11084848 + MER74A LTR ERVL 2 558 0 338 283 109 0 chr10 134505197 134505335 -11083953 + MIR SINE MIR 47 199 -63 388 313 65 75 chr10 134505502 134505889 -11083399 + L1MB2 LINE L1 424 806 -5497 3073 234 35 30 chr10 134506039 134507312 -11081976 + L1MB2 LINE L1 795 1919 -4465 1722 173 0 4 chr10 134507335 134507601 -11081687 + AluJo SINE Alu 5 269 -43 3313 197 76 8 chr10 134507687 134508525 -11080763 + L1MB2 LINE L1 4402 5296 -1086 1395 153 18 5 chr10 134508536 134508759 -11080529 - AluJo SINE Alu -2 310 85 2102 109 9 50 chr10 134508770 134509092 -11080196 + AluSq SINE Alu 1 309 -4 4627 168 23 26 chr10 134509097 134510136 -11079152 + L1MB2 LINE L1 5294 6321 -86 1587 176 36 13 chr10 134510136 134510437 -11078851 + AluJo SINE Alu 1 308 -4 4627 168 23 26 chr10 134510437 134510497 -11078791 + L1MB2 LINE L1 6321 6380 -27 191 120 133 107 chr10 134511288 134511363 -11077925 - MIR SINE MIR -83 125 49 328 275 211 14 chr10 134511515 134511657 -11077631 - L1MC4a LINE L1 -99 7709 7540 233 364 85 34 chr10 134513640 134513876 -11075412 - MIR SINE MIR 0 262 15 280 143 36 0 chr10 134514416 134514472 -11074816 + Alu SINE Alu 241 298 -4 2589 236 73 38 chr10 134514481 134514738 -11074550 + L1ME3A LINE L1 5190 5437 -733 2371 107 7 3 chr10 134514738 134515048 -11074240 + AluSx SINE Alu 1 311 -1 2589 236 73 38 chr10 134515048 134515726 -11073562 + L1ME3A LINE L1 5437 6170 0 255 298 0 12 chr10 134515952 134516036 -11073252 + (TG)n Simple_repeat Simple_repeat 1 83 0 244 173 0 39 chr10 134516164 134516216 -11073072 + L2 LINE L2 3262 3311 -2 227 333 0 0 chr10 134517042 134517123 -11072165 - MER117 DNA MER1_type -41 156 76 2192 113 3 0 chr10 134517285 134517576 -11071712 + AluSx SINE Alu 7 298 -14 780 144 25 0 chr10 134517584 134517702 -11071586 + AluJ SINE Alu 7 127 -185 2444 80 0 16 chr10 134517708 134518022 -11071266 + AluSc SINE Alu 1 309 0 1228 151 0 0 chr10 134518052 134518224 -11071064 + AluJ SINE Alu 129 300 -12 447 336 0 0 chr10 134520284 134520394 -11068894 - MIR SINE MIR -139 123 14 423 255 50 28 chr10 134520410 134520551 -11068737 - MIR SINE MIR 0 262 119 699 198 43 6 chr10 134520567 134520729 -11068559 + MER96B DNA MER1_type? 250 417 0 192 310 103 0 chr10 134520729 134520816 -11068472 - MIR SINE MIR -83 125 30 * 327 345 29 7 chr10 134520799 134520938 -11068350 + MIR SINE MIR 51 192 -70 1738 206 75 55 chr10 134520943 134521308 -11067980 - MLT1D LTR MaLR 0 505 126 2928 139 6 17 chr10 134521308 134521648 -11067640 + L1PA15 LINE L1 5703 6038 -127 2955 132 5 0 chr10 134521648 134522074 -11067214 - MSTA LTR MaLR 0 428 1 2928 139 6 17 chr10 134522074 134522201 -11067087 + L1PA15 LINE L1 6038 6165 0 1738 206 75 55 chr10 134522201 134522330 -11066958 - MLT1D LTR MaLR -379 126 1 277 273 0 15 chr10 134522330 134522396 -11066892 + MIR SINE MIR 197 261 -1 2550 66 3 0 chr10 134522498 134522803 -11066485 + AluY SINE Alu 1 306 -5 285 298 50 6 chr10 134523788 134523949 -11065339 + L1M4 LINE L1 3683 3850 -2296 372 294 9 0 chr10 134523953 134524062 -11065226 + L1ME2 LINE L1 6045 6154 -10 2852 240 35 81 chr10 134524079 134524730 -11064558 + L1M4 LINE L1 3846 4526 -1620 1709 154 68 14 chr10 134524730 134525022 -11064266 - AluJb SINE Alu -4 308 1 2852 240 35 81 chr10 134525022 134525697 -11063591 + L1M4 LINE L1 4526 5106 -1040 2372 105 0 0 chr10 134525697 134526002 -11063286 + AluSg SINE Alu 1 305 -5 2852 240 35 81 chr10 134526002 134526080 -11063208 + L1M4 LINE L1 5106 5186 -960 211 309 44 0 chr10 134526366 134526434 -11062854 + L2 LINE L2 3225 3295 -18 325 240 273 0 chr10 134527332 134527482 -11061806 - MIR3 SINE MIR -9 199 9 581 264 90 5 chr10 134527811 134528023 -11061265 + MIR SINE MIR 22 251 -11 395 266 57 0 chr10 134529247 134529371 -11059917 - L1ME LINE L1 -376 5745 5615 307 153 153 0 chr10 134529402 134529461 -11059827 - L1MC4 LINE L1 0 8042 7975 224 288 41 14 chr10 134532188 134532261 -11057027 + L3 LINE CR1 1503 1577 0 387 257 71 21 chr10 134532402 134532542 -11056746 + MIR3 SINE MIR 46 192 -16 822 254 39 5 chr10 134534022 134534227 -11055061 + MIR SINE MIR 6 217 -45 300 277 50 10 chr10 134534741 134534842 -11054446 + L1ME4a LINE L1 6014 6118 -3 225 0 0 0 chr10 134536762 134536787 -11052501 + (TTAA)n Simple_repeat Simple_repeat 2 26 0 2128 120 3 0 chr10 134536795 134537078 -11052210 - AluSq SINE Alu -29 284 1 506 213 85 7 chr10 134537088 134537229 -11052059 - L1MD3 LINE L1 0 7995 7844 191 363 75 0 chr10 134537270 134537350 -11051938 + L2 LINE L2 3141 3226 -46 305 284 187 11 chr10 134537725 134537993 -11051295 + L2 LINE L2 2996 3310 -3 202 281 53 0 chr10 134538165 134538222 -11051066 - L2 LINE L2 -6 3307 3248 185 162 27 27 chr10 134538429 134538466 -11050822 + L2 LINE L2 3210 3246 -26 240 163 0 0 chr10 134538471 134538514 -11050774 + GA-rich Low_complexity Low_complexity 4 46 0 220 259 0 0 chr10 134539768 134539822 -11049466 + GA-rich Low_complexity Low_complexity 1 54 0 536 221 81 15 chr10 134540002 134540138 -11049150 - MIR SINE MIR -1 261 117 1010 185 22 36 chr10 134540804 134541026 -11048262 - MER20 DNA MER1_type 0 219 1 253 217 29 0 chr10 134541664 134541733 -11047555 - MER117 DNA MER1_type -51 146 76 216 0 0 0 chr10 134541834 134541858 -11047430 + (A)n Simple_repeat Simple_repeat 1 24 0 2057 118 14 0 chr10 134542070 134542349 -11046939 - AluSx SINE Alu -17 295 13 209 289 0 0 chr10 134542432 134542477 -11046811 - L2 LINE L2 -7 3306 3262 273 277 0 15 chr10 134542963 134543028 -11046260 + L2 LINE L2 3250 3313 0 346 341 206 11 chr10 134543063 134543529 -11045759 + L2 LINE L2 2300 2856 -458 254 291 204 42 chr10 134543567 134543856 -11045432 + L2 LINE L2 2933 3268 -4 902 202 0 37 chr10 134544968 134545156 -11044132 + FAM SINE Alu 1 45 -4 2138 123 37 54 chr10 134545160 134545426 -11043862 + MER65A LTR ERV1 46 304 -141 1893 151 17 17 chr10 134545426 134545724 -11043564 + AluJb SINE Alu 2 299 -13 2138 123 37 54 chr10 134545724 134545863 -11043425 + MER65A LTR ERV1 304 444 -1 399 56 0 0 chr10 134545919 134545973 -11043315 + (TATAA)n Simple_repeat Simple_repeat 2 55 0 210 213 64 0 chr10 134546252 134546299 -11042989 - L2 LINE L2 -10 3303 3254 * 505 183 153 7 chr10 134546265 134546402 -11042886 - MIR SINE MIR -17 245 89 315 0 0 0 chr10 134546985 134547020 -11042268 + (TG)n Simple_repeat Simple_repeat 2 36 0 1634 201 3 16 chr10 134547020 134547334 -11041954 - AluJo SINE Alu 0 312 3 455 330 56 56 chr10 134547381 134547720 -11041568 + MLT1H LTR MaLR 12 350 -199 699 275 20 25 chr10 134548024 134548224 -11041064 - MIR SINE MIR -14 248 50 2784 121 26 19 chr10 134548676 134549105 -11040183 + MSTB1 LTR MaLR 1 432 0 23 33 0 0 chr10 134549348 134549378 -11039910 + AT_rich Low_complexity Low_complexity 1 30 0 2717 166 30 41 chr10 134550137 134550698 -11038590 - L1MB5 LINE L1 0 6174 5620 460 219 109 17 chr10 134550889 134551008 -11038280 + MIR SINE MIR 21 150 -112 250 299 0 0 chr10 134551009 134551076 -11038212 + (ATGGTG)n Simple_repeat Simple_repeat 1 67 0 354 236 138 49 chr10 134551798 134551921 -11037367 + MER94 DNA DNA 1 134 0 322 319 22 37 chr10 134552504 134552639 -11036649 - L2 LINE L2 -1 3312 3180 1463 182 7 30 chr10 134552772 134553074 -11036214 - AluJo SINE Alu -17 295 1 336 312 28 0 chr10 134553074 134553183 -11036105 - L1ME LINE L1 -314 5807 5696 233 158 35 18 chr10 134553215 134553272 -11036016 - L1MC3 LINE L1 -1157 6628 6571 542 311 52 22 chr10 134553299 134553790 -11035498 - L1ME LINE L1 -534 5636 5182 261 0 0 0 chr10 134553824 134553853 -11035435 + (TG)n Simple_repeat Simple_repeat 2 30 0 2057 136 3 0 chr10 134553891 134554199 -11035089 + AluSq SINE Alu 1 309 -4 263 259 27 36 chr10 134554419 134554531 -11034757 + L2 LINE L2 2692 2802 -512 335 263 12 0 chr10 134555462 134555542 -11033746 + MIR3 SINE MIR 128 208 0 2197 103 0 28 chr10 134555744 134556065 -11033223 - AluSx SINE Alu 0 312 1 252 310 11 23 chr10 134556481 134556568 -11032720 + L2 LINE L2 3179 3264 -8 1469 78 10 0 chr10 134557568 134557761 -11031527 - AluSq SINE Alu -21 292 98 1017 161 0 11 chr10 134558036 134558210 -11031078 - AluSp SINE Alu -141 172 1 3853 121 85 63 chr10 134558210 134558487 -11030801 - Tigger3b DNA MER2_type -2202 826 557 2467 68 0 0 chr10 134558487 134558798 -11030490 + AluY SINE Alu 1 311 0 3853 121 85 63 chr10 134558798 134559328 -11029960 - Tigger3b DNA MER2_type -2471 557 1 5260 212 54 13 chr10 134559334 134559706 -11029582 - L1ME1 LINE L1 -234 5932 5577 2185 85 0 0 chr10 134559706 134559989 -11029299 - AluSx SINE Alu -11 301 19 5260 212 54 13 chr10 134559989 134561559 -11027729 - L1ME1 LINE L1 -589 5577 3910 1855 183 29 0 chr10 134561548 134561931 -11027357 - L1ME1 LINE L1 -3043 3103 2710 * 6140 136 28 5 chr10 134561979 134563109 -11026179 - L1PA16 LINE L1 -9 6157 4991 665 237 124 34 chr10 134563117 134563471 -11025817 - L1M4 LINE L1 -2803 3343 2958 523 324 39 6 chr10 134564832 134565011 -11024277 - MIR3 SINE MIR -9 199 15 431 248 154 0 chr10 134566356 134566505 -11022783 - L2 LINE L2 0 3313 3142 254 246 66 0 chr10 134566506 134566567 -11022721 + MIR SINE MIR 36 100 -108 2166 105 0 0 chr10 134566802 134567097 -11022191 - AluSx SINE Alu -17 295 1 1570 142 132 3 chr10 134567299 134567610 -11021678 - L1MB3 LINE L1 0 6183 5833 222 255 7 47 chr10 134570149 134570276 -11019012 + MIR SINE MIR 35 203 -59 281 308 0 0 chr10 134570308 134570373 -11018915 - L2 LINE L2 -2 3270 3206 428 279 54 14 chr10 134570801 134570948 -11018340 + MIR SINE MIR 56 208 -54 21 36 0 0 chr10 134571454 134571482 -11017806 + AT_rich Low_complexity Low_complexity 1 28 0 1112 160 42 5 chr10 134571846 134572058 -11017230 - AluSg/x SINE Alu -9 301 82 281 325 107 15 chr10 134572631 134572837 -11016451 - L1MC/D LINE L1 -2249 5559 5335 1857 127 0 14 chr10 134573485 134573776 -11015512 - AluSx SINE Alu -23 289 3 504 258 45 43 chr10 134573799 134573821 -11015467 + L1MC/D LINE L1 5131 5151 -1032 2401 63 0 3 chr10 134573821 134574124 -11015164 - AluY SINE Alu -9 302 1 504 258 45 43 chr10 134574124 134574407 -11014881 + L1MC/D LINE L1 5151 5440 -743 278 238 39 87 chr10 134574435 134574641 -11014647 + L1MC5 LINE L1 7368 7563 -398 1177 170 9 14 chr10 134574998 134575255 -11014033 + AluJo SINE Alu 87 342 0 350 321 134 8 chr10 134575255 134575389 -11013899 + L1MC5 LINE L1 7739 7889 -72 1085 207 32 24 chr10 134575394 134575640 -11013648 + L1MC4 LINE L1 5387 5634 -2174 614 281 32 0 chr10 134575874 134576095 -11013193 + L1MC4 LINE L1 7142 7369 -673 923 181 104 48 chr10 134576149 134576419 -11012869 + L1MB8 LINE L1 5894 6178 0 2157 203 118 20 chr10 134576476 134576826 -11012462 + L2 LINE L2 2097 2524 -790 2207 115 128 11 chr10 134576826 134577208 -11012080 - MSTA LTR MaLR 0 428 2 2157 203 118 20 chr10 134577208 134577414 -11011874 + L2 LINE L2 2524 2708 -606 574 250 266 0 chr10 134577450 134577634 -11011654 - MIR SINE MIR -26 236 4 254 159 174 138 chr10 134577638 134577660 -11011628 + L2 LINE L2 2728 2748 -566 738 151 16 109 chr10 134577660 134577852 -11011436 + MER5B DNA MER1_type 1 174 -4 254 159 174 138 chr10 134577852 134577967 -11011321 + L2 LINE L2 2748 2870 -444 853 253 30 66 chr10 134578016 134578320 -11010968 + L2 LINE L2 3020 3312 -1 1864 156 0 9 chr10 134579765 134580080 -11009208 - AluJb SINE Alu 0 312 1 280 310 10 20 chr10 134580306 134580406 -11008882 + L3 LINE CR1 1473 1571 -6 21 0 0 0 chr10 134581140 134581161 -11008127 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr10 134581411 134581439 -11007849 + AT_rich Low_complexity Low_complexity 1 28 0 281 68 23 0 chr10 134581980 134582024 -11007264 + (TA)n Simple_repeat Simple_repeat 2 46 0 205 158 105 92 chr10 134583010 134583086 -11006202 + MIR SINE MIR 30 106 -102 28 61 0 0 chr10 134583360 134583409 -11005879 + GC_rich Low_complexity Low_complexity 1 49 0 503 288 105 34 chr10 134584358 134584681 -11004607 - L2 LINE L2 0 3313 2968 192 213 43 0 chr10 134584692 134584739 -11004549 + L2 LINE L2 3253 3301 -12 237 338 31 44 chr10 134585135 134585295 -11003993 + MIR SINE MIR 72 229 -33 226 206 14 55 chr10 134585477 134585550 -11003738 + Charlie8 DNA MER1_type 31 100 -2317 247 178 0 0 chr10 134585561 134585606 -11003682 + Charlie8 DNA MER1_type 2373 2417 0 1664 117 83 0 chr10 134585856 134586120 -11003168 + AluSx SINE Alu 9 294 -18 188 320 40 0 chr10 134586180 134586255 -11003033 - MIR SINE MIR -68 140 63 1888 114 7 33 chr10 134586562 134586868 -11002420 - AluSx SINE Alu -14 298 1 183 232 107 0 chr10 134586938 134586994 -11002294 - L2 LINE L2 -5 3308 3247 414 248 32 32 chr10 134587104 134587261 -11002027 + L2 LINE L2 3108 3264 -49 2261 81 7 16 chr10 134588434 134588743 -11000545 + AluSg SINE Alu 5 310 0 266 251 43 8 chr10 134588813 134588904 -11000384 + MIR SINE MIR 35 128 -91 180 279 0 49 chr10 134589267 134589328 -10999960 + MER5A DNA MER1_type 122 179 -10 210 233 0 0 chr10 134589283 134589326 -10999962 - MER5B DNA MER1_type -124 54 12 286 282 97 10 chr10 134590162 134590265 -10999023 + MER5B DNA MER1_type 19 130 -48 2792 195 117 8 chr10 134590291 134590943 -10998345 - L1ME3 LINE L1 -8 6154 5432 268 271 0 0 chr10 134590943 134591002 -10998286 - MER5B DNA MER1_type -116 62 4 256 332 261 0 chr10 134591392 134591702 -10997586 + L2 LINE L2 2398 2788 -526 1506 210 36 57 chr10 134591818 134591940 -10997348 - L1ME1 LINE L1 -5 6161 6038 2093 111 3 13 chr10 134591940 134592238 -10997050 + AluSx SINE Alu 3 297 -15 1506 210 36 57 chr10 134592238 134592557 -10996731 - L1ME1 LINE L1 -128 6038 5729 221 338 188 15 chr10 134592732 134592865 -10996423 + L2 LINE L2 3075 3230 -42 239 318 135 12 chr10 134593827 134593997 -10995291 + MIR SINE MIR 34 224 -38 246 343 20 29 chr10 134594374 134594476 -10994812 - L2 LINE L2 -508 2806 2706 415 341 78 0 chr10 134594817 134594996 -10994292 + MIR SINE MIR 20 212 -50 675 296 77 5 chr10 134595027 134595247 -10994041 + MIR SINE MIR 20 255 -7 324 148 0 0 chr10 134595349 134595410 -10993878 + (TGGA)n Simple_repeat Simple_repeat 2 62 0 415 266 7 14 chr10 134595420 134595559 -10993729 + (TGAA)n Simple_repeat Simple_repeat 1 138 0 273 240 260 47 chr10 134596531 134596681 -10992607 - MIR SINE MIR -27 235 54 489 17 0 0 chr10 134596752 134596810 -10992478 + (CA)n Simple_repeat Simple_repeat 2 59 0 371 284 63 16 chr10 134597467 134597594 -10991694 - HAL1b LINE L1 -23 1325 1193 2853 182 118 35 chr10 134597652 134598235 -10991053 - L1MD2 LINE L1 -1 6358 5684 2004 113 7 0 chr10 134598235 134598518 -10990770 + AluSq SINE Alu 1 312 0 244 0 0 0 chr10 134598518 134598545 -10990743 + (TAAA)n Simple_repeat Simple_repeat 2 76 0 2853 182 118 35 chr10 134598545 134598805 -10990483 - L1MD2 LINE L1 -675 5684 5447 3031 208 135 134 chr10 134598808 134598923 -10990365 - L1MDa LINE L1 -4496 2044 1931 1998 130 0 19 chr10 134598923 134599239 -10990049 - AluSx SINE Alu -2 310 1 3031 208 135 134 chr10 134599239 134599786 -10989502 - L1MDa LINE L1 -4609 1931 1386 828 197 0 0 chr10 134599786 134599923 -10989365 - AluJb SINE Alu -19 293 157 3031 208 135 134 chr10 134599923 134601067 -10988221 - L1MDa LINE L1 -5154 1386 99 879 275 13 17 chr10 134601560 134601793 -10987495 + MIR SINE MIR 31 262 0 287 298 140 83 chr10 134602705 134603104 -10986184 - L2 LINE L2 -11 3302 2881 2281 79 0 3 chr10 134603225 134603516 -10985772 - AluSq SINE Alu -23 290 1 2577 153 12 25 chr10 134603991 134604063 -10985225 - MSTB LTR MaLR 0 426 355 2164 100 3 0 chr10 134604063 134604364 -10984924 + AluY SINE Alu 1 302 -9 2577 153 12 25 chr10 134604364 134604723 -10984565 - MSTB LTR MaLR -71 355 1 885 220 16 0 chr10 134605153 134605339 -10983949 + MER5A DNA MER1_type 1 189 0 302 305 53 33 chr10 134605503 134605654 -10983634 + MIR SINE MIR 31 184 -78 1917 120 25 0 chr10 134605712 134605996 -10983292 - AluSx SINE Alu -21 291 1 415 244 269 41 chr10 134606468 134606710 -10982578 + MER5C DNA MER1_type 9 305 -19 1015 157 41 0 chr10 134608497 134608669 -10980619 - MLT1D LTR MaLR 0 505 327 1188 187 33 8 chr10 134608704 134608945 -10980343 - MLT1D LTR MaLR -258 247 1 272 272 11 33 chr10 134608991 134609083 -10980205 - MIR SINE MIR -74 134 45 475 290 92 45 chr10 134610317 134610633 -10978655 - L1ME4a LINE L1 -170 5951 5610 1248 241 89 47 chr10 134610633 134611160 -10978128 - MLT1H LTR MaLR 0 549 1 475 290 92 45 chr10 134611160 134611247 -10978041 - L1ME4a LINE L1 -511 5610 5529 2405 150 106 2 chr10 134611459 134611865 -10977423 + MER83 LTR ERV1 1 448 0 204 150 0 0 chr10 134612179 134612188 -10977100 + (T)n Simple_repeat Simple_repeat 1 9 -31 2168 193 33 13 chr10 134612188 134612638 -10976650 - L1MB7 LINE L1 0 6184 5726 204 150 0 0 chr10 134612638 134612668 -10976620 + (T)n Simple_repeat Simple_repeat 8 40 0 638 155 29 0 chr10 134612685 134612788 -10976500 - U6 snRNA snRNA 0 107 2 850 163 0 13 chr10 134612788 134612941 -10976347 - FRAM SINE Alu -14 162 12 1170 198 32 8 chr10 134612993 134613240 -10976048 - L1MB7 LINE L1 -435 5743 5491 314 240 132 25 chr10 134613429 134613550 -10975738 + L2 LINE L2 3138 3271 -1 258 208 0 0 chr10 134613710 134613758 -10975530 + MER66A LTR ERV1 290 337 -141 271 240 13 0 chr10 134613780 134613855 -10975433 + MER3 DNA MER1_type 99 127 -82 625 218 17 5 chr10 134614144 134614354 -10974934 - MER3 DNA MER1_type -80 129 1 391 267 23 53 chr10 134614801 134614932 -10974356 - MIR3 SINE MIR -3 205 79 572 280 150 10 chr10 134614984 134615191 -10974097 - MIR SINE MIR 0 262 27 383 315 42 6 chr10 134615904 134616069 -10973219 + MER5A DNA MER1_type 16 186 -3 335 327 111 0 chr10 134616367 134616443 -10972845 + MIR SINE MIR 33 99 -163 1831 134 0 0 chr10 134616443 134616704 -10972584 - AluSx SINE Alu -51 261 1 335 327 111 0 chr10 134616704 134616789 -10972499 + MIR SINE MIR 99 212 -50 246 259 106 0 chr10 134616803 134616888 -10972400 + MIR3 SINE MIR 101 194 -14 1958 153 0 6 chr10 134617633 134617947 -10971341 - AluJb SINE Alu 0 312 1 780 259 89 19 chr10 134618200 134618470 -10970818 + L1ME3A LINE L1 5821 6109 -61 725 211 7 0 chr10 134618472 134618614 -10970674 + MER96B DNA MER1_type? 273 415 -2 784 296 94 35 chr10 134618702 134619127 -10970161 - LTR33A LTR ERVL -8 515 66 1904 251 43 20 chr10 134619361 134619901 -10969387 + MLT1E LTR MaLR 39 591 -2 236 220 0 51 chr10 134620560 134620619 -10968669 - MER5B DNA MER1_type -3 175 120 486 268 4 101 chr10 134620624 134620740 -10968548 - L1ME2 LINE L1 -7 6157 6071 2011 70 0 4 chr10 134620740 134621034 -10968254 + AluY SINE Alu 28 320 0 486 268 4 101 chr10 134621034 134621144 -10968144 - L1ME2 LINE L1 -93 6071 5952 465 268 35 28 chr10 134621149 134621291 -10967997 - MER5B DNA MER1_type -34 144 2 364 281 11 0 chr10 134622371 134622460 -10966828 - MIR SINE MIR -82 126 37 192 182 0 0 chr10 134622463 134622507 -10966781 + (TTCA)n Simple_repeat Simple_repeat 3 46 0 586 146 0 0 chr10 134622523 134622619 -10966669 + AluSg/x SINE Alu 212 307 -2 192 323 140 11 chr10 134622619 134622712 -10966576 - L2 LINE L2 -28 3244 3140 231 213 0 0 chr10 134622747 134622794 -10966494 + (CAT)n Simple_repeat Simple_repeat 3 49 0 539 254 48 24 chr10 134622806 134622971 -10966317 - MIR SINE MIR -21 241 73 309 255 39 98 chr10 134623273 134623426 -10965862 + MIR SINE MIR 119 262 0 2187 105 0 46 chr10 134623658 134623983 -10965305 + AluSx SINE Alu 3 312 0 2453 63 0 0 chr10 134623983 134624283 -10965005 + AluY SINE Alu 1 300 -11 288 268 72 41 chr10 134626185 134626282 -10963006 - L2 LINE L2 0 3313 3214 575 260 99 17 chr10 134628809 134628990 -10960298 - MIR SINE MIR -54 208 13 605 253 22 0 chr10 134629121 134629299 -10959989 + MER5A DNA MER1_type 1 182 -7 272 241 256 0 chr10 134629549 134629682 -10959606 + MIR SINE MIR 14 180 -82 377 269 17 17 chr10 134629694 134629813 -10959475 - L2 LINE L2 -1 3312 3194 204 245 166 33 chr10 134630067 134630218 -10959070 - L2 LINE L2 -467 2847 2677 1670 182 26 18 chr10 134630591 134630932 -10958356 + L1PA16 LINE L1 5802 6145 -21 209 271 0 0 chr10 134632950 134632998 -10956290 - L2 LINE L2 0 3313 3266 1880 130 3 20 chr10 134633943 134634243 -10955045 - AluJo SINE Alu -1 311 17 1072 171 0 6 chr10 134634588 134634764 -10954524 + FAM SINE Alu 1 175 0 457 335 18 41 chr10 134635246 134635464 -10953824 + MIR SINE MIR 35 247 -15 2341 77 0 6 chr10 134635516 134635827 -10953461 - AluSx SINE Alu -3 309 1 512 271 117 9 chr10 134636705 134636912 -10952376 - MIR SINE MIR -16 246 16 1425 207 67 28 chr10 134638129 134638516 -10950772 - MLT1C LTR MaLR -8 459 58 302 227 0 15 chr10 134639597 134639663 -10949625 + LTR67 LTR ERVL 5 69 -488 513 153 18 18 chr10 134639817 134639928 -10949360 - L1MA9 LINE L1 -66 6246 6136 1826 148 3 3 chr10 134640008 134640312 -10948976 + AluJb SINE Alu 1 304 -8 2330 96 0 3 chr10 134640493 134640806 -10948482 + AluSq SINE Alu 1 312 -1 237 161 218 46 chr10 134640806 134640893 -10948395 + HsTC2 DNA Tc2 1793 1894 -4 342 267 144 14 chr10 134640967 134641113 -10948175 + MIR SINE MIR 81 245 -17 320 263 129 23 chr10 134641419 134641590 -10947698 + L1ME1 LINE L1 3083 3271 -2875 2190 228 41 26 chr10 134641961 134642959 -10946329 + L1ME1 LINE L1 4849 5895 -271 431 168 42 21 chr10 134642988 134643083 -10946205 + L1ME1 LINE L1 5791 5887 -279 1417 98 19 0 chr10 134643087 134643292 -10945996 + AluSp SINE Alu 1 209 -104 330 269 106 88 chr10 134643407 134643634 -10945654 + L3 LINE CR1 682 912 -665 287 330 96 34 chr10 134643639 134643848 -10945440 + L2 LINE L2 2869 3090 -182 1573 110 0 4 chr10 134644450 134644678 -10944610 + AluSx SINE Alu 1 227 -85 315 286 26 62 chr10 134645019 134645211 -10944077 + MER5A DNA MER1_type 3 187 -2 * 479 321 0 21 chr10 134645040 134645227 -10944061 - MER5A DNA MER1_type -6 183 1 1479 206 221 36 chr10 134646749 134647278 -10942010 + L1MC4 LINE L1 7272 7898 -144 524 216 56 14 chr10 134647361 134647547 -10941741 + L1ME LINE L1 5304 5493 -671 3110 210 102 17 chr10 134647573 134648415 -10940873 + L1MC4 LINE L1 6788 7701 -341 240 156 156 0 chr10 134648778 134648823 -10940465 + Tigger5 DNA MER2_type 1 52 -2271 468 189 44 0 chr10 134648831 134648921 -10940367 + Tigger5 DNA MER2_type 2230 2323 0 21 0 0 0 chr10 134649122 134649143 -10940145 + AT_rich Low_complexity Low_complexity 1 21 0 230 341 58 51 chr10 134650559 134650697 -10938591 + MIR SINE MIR 2 140 -122 319 125 0 0 chr10 134651422 134651478 -10937810 - L1MD1 LINE L1 -9 6233 6178 690 200 0 0 chr10 134651637 134651762 -10937526 + FLAM_A SINE Alu 15 139 -3 849 178 24 18 chr10 134651762 134651931 -10937357 - L1MD1 LINE L1 -70 6172 6003 180 0 0 0 chr10 134652845 134652865 -10936423 + (T)n Simple_repeat Simple_repeat 1 20 0 2757 246 141 30 chr10 134653060 134653828 -10935460 - L2 LINE L2 -779 2535 1621 1945 159 10 3 chr10 134653828 134654136 -10935152 + AluJb SINE Alu 1 310 -2 2757 246 141 30 chr10 134654136 134654404 -10934884 - L2 LINE L2 -1693 1621 1384 453 248 155 56 chr10 134654689 134655012 -10934276 - MLT1F1 LTR MaLR -45 522 191 2234 176 95 17 chr10 134655137 134655619 -10933669 - L1MB5 LINE L1 0 6174 5655 1920 155 18 9 chr10 134655629 134655958 -10933330 - Tigger1 DNA MER2_type -7 2411 2080 * 8169 119 37 27 chr10 134655952 134656542 -10932746 - Tigger1 DNA MER2_type -575 1843 1261 2052 114 13 34 chr10 134656542 134656840 -10932448 + AluSx SINE Alu 1 292 -20 8169 119 37 27 chr10 134656840 134657613 -10931675 - Tigger1 DNA MER2_type -1157 1261 466 1511 149 0 13 chr10 134657618 134657846 -10931442 + AluJo SINE Alu 1 225 -87 551 155 0 0 chr10 134657846 134657930 -10931358 - Tigger1 DNA MER2_type -2334 84 1 2211 160 59 35 chr10 134657930 134658789 -10930499 - L1MB5 LINE L1 -530 5644 4776 766 216 58 32 chr10 134659316 134659594 -10929694 - L1MC5 LINE L1 -431 7530 7246 514 301 59 43 chr10 134659678 134659934 -10929354 + MIR SINE MIR 3 262 0 22 0 0 0 chr10 134661031 134661053 -10928235 + AT_rich Low_complexity Low_complexity 1 22 0 195 337 39 51 chr10 134661476 134661654 -10927634 + L2 LINE L2 2800 2975 -339 434 251 147 0 chr10 134662843 134663006 -10926282 - L2 LINE L2 -1908 1406 1220 802 310 65 45 chr10 134663007 134663078 -10926210 - L1MB5 LINE L1 -2025 4121 4053 1725 61 13 13 chr10 134663078 134663308 -10925980 + MER30 DNA MER1_type 1 230 0 802 310 65 45 chr10 134663308 134663764 -10925524 - L1MB5 LINE L1 -2093 4053 3572 2189 99 0 30 chr10 134663764 134664067 -10925221 + AluSq SINE Alu 1 294 -19 802 310 65 45 chr10 134664067 134664297 -10924991 - L1MB5 LINE L1 -2574 3572 3348 213 322 44 0 chr10 134664747 134664837 -10924451 + L2 LINE L2 2944 3037 -276 933 191 28 6 chr10 134665322 134665500 -10923788 + MER5A DNA MER1_type 1 182 -7 1716 159 20 20 chr10 134665502 134665797 -10923491 + AluJb SINE Alu 1 295 -17 761 190 31 43 chr10 134665810 134665973 -10923315 + MER105 DNA DNA 44 204 0 21 0 0 0 chr10 134666018 134666039 -10923249 + AT_rich Low_complexity Low_complexity 1 21 0 307 214 130 19 chr10 134666663 134666817 -10922471 - L1ME4a LINE L1 0 6121 5951 318 317 35 25 chr10 134666983 134667185 -10922103 - L1ME4a LINE L1 -193 5928 5725 857 65 24 0 chr10 134667188 134667311 -10921977 - AluY SINE Alu -9 302 177 2413 65 7 10 chr10 134668252 134668558 -10920730 - AluY SINE Alu -2 309 5 305 286 65 0 chr10 134669493 134669570 -10919718 - L2 LINE L2 -27 3245 3164 192 40 0 0 chr10 134669998 134670023 -10919265 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 711 286 178 53 chr10 134671159 134671795 -10917493 + HAL1 LINE L1 156 870 -1637 2107 120 17 0 chr10 134672373 134672665 -10916623 - AluSq SINE Alu -16 297 1 359 308 100 13 chr10 134672725 134672886 -10916402 - MIR SINE MIR -27 235 62 184 250 0 23 chr10 134673064 134673108 -10916180 - L2 LINE L2 -4 3309 3267 673 246 96 71 chr10 134674335 134674797 -10914491 - LTR33A LTR ERVL -20 503 56 628 309 30 12 chr10 134674834 134675140 -10914148 + L1ME LINE L1 5488 5795 -326 196 307 136 0 chr10 134676527 134676667 -10912621 + MIR SINE MIR 100 258 -4 28 79 0 0 chr10 134677073 134677136 -10912152 + AT_rich Low_complexity Low_complexity 1 63 0 481 189 234 41 chr10 134677221 134677465 -10911823 - L1ME4a LINE L1 -213 5908 5618 4272 191 70 34 chr10 134677896 134678951 -10910337 + L1MD2 LINE L1 5254 6346 -13 360 252 93 13 chr10 134679753 134679839 -10909449 + MIR SINE MIR 79 157 -105 185 0 0 39 chr10 134679839 134679865 -10909423 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 360 252 93 13 chr10 134679865 134679929 -10909359 + MIR SINE MIR 157 241 -21 2356 91 10 0 chr10 134681192 134681489 -10907799 + AluSx SINE Alu 1 300 -12 429 157 0 59 chr10 134682262 134682364 -10906924 + L1MC4 LINE L1 7246 7341 -701 839 198 96 0 chr10 134682698 134682885 -10906403 + MER3 DNA MER1_type 1 205 -4 288 286 147 95 chr10 134682913 134683165 -10906123 + L2 LINE L2 3007 3271 -1 320 258 65 32 chr10 134683352 134683476 -10905812 - L2 LINE L2 -2 3311 3184 203 243 14 27 chr10 134684164 134684238 -10905050 + (CACCC)n Simple_repeat Simple_repeat 3 75 0 189 0 0 0 chr10 134684432 134684453 -10904835 + (T)n Simple_repeat Simple_repeat 1 21 0 2024 128 23 7 chr10 134685699 134686005 -10903283 + AluSx SINE Alu 1 311 -1 344 235 129 0 chr10 134686155 134686287 -10903001 - L1ME4a LINE L1 -181 5940 5792 22 0 0 0 chr10 134688778 134688800 -10900488 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr10 134688871 134688902 -10900386 + AT_rich Low_complexity Low_complexity 1 31 0 333 0 0 0 chr10 134689801 134689838 -10899450 + (TG)n Simple_repeat Simple_repeat 2 38 0 2176 113 3 0 chr10 134691433 134691726 -10897562 - AluSx SINE Alu -18 294 1 22 0 0 0 chr10 134692417 134692439 -10896849 + AT_rich Low_complexity Low_complexity 1 22 0 242 311 15 45 chr10 134693560 134693692 -10895596 - MIR3 SINE MIR -23 185 58 205 318 119 40 chr10 134694705 134694856 -10894432 + MIR SINE MIR 29 191 -71 3360 32 22 0 chr10 134694883 134695290 -10893998 - L1PA3 LINE L1 0 6155 5740 1361 84 4 44 chr10 134695731 134695956 -10893332 + AluSp SINE Alu 82 297 -16 308 239 128 30 chr10 134695956 134696190 -10893098 - L1ME4a LINE L1 -2286 5522 5266 28 48 0 0 chr10 134696618 134696660 -10892628 + AT_rich Low_complexity Low_complexity 1 42 0 1831 193 16 11 chr10 134696820 134697183 -10892105 - MLT1A1 LTR MaLR 0 365 1 2002 169 86 5 chr10 134697507 134697894 -10891394 - MER63 DNA MER1_type 0 1060 642 1251 198 53 7 chr10 134697894 134698177 -10891111 - MER58B DNA MER1_type -1 340 45 387 125 0 0 chr10 134698198 134698262 -10891026 - MER63 DNA MER1_type -925 136 73 40 37 0 0 chr10 134698755 134698809 -10890479 + AT_rich Low_complexity Low_complexity 1 54 0 343 249 149 17 chr10 134698834 134699015 -10890273 - L1ME4a LINE L1 -1767 4379 4175 305 258 141 66 chr10 134699299 134699497 -10889791 + L2 LINE L2 2638 2850 -464 236 289 33 22 chr10 134699765 134699855 -10889433 - L2 LINE L2 -8 3264 3178 974 303 60 12 chr10 134699897 134700205 -10889083 - MLT1I LTR MaLR -17 392 65 341 177 25 13 chr10 134700205 134700284 -10889004 - MER116 DNA Mariner 0 80 1 974 303 60 12 chr10 134700284 134700308 -10888980 - MLT1I LTR MaLR -344 65 44 364 237 26 26 chr10 134700558 134700672 -10888616 - L2 LINE L2 -10 3262 3149 1214 215 116 3 chr10 134700810 134701121 -10888167 - MLT1E1 LTR MaLR -308 346 1 1043 285 90 27 chr10 134701195 134701784 -10887504 - L1M4 LINE L1 -768 5378 4753 650 220 27 14 chr10 134701835 134702017 -10887271 - L1MB8 LINE L1 -148 6018 5835 310 217 87 0 chr10 134702567 134702659 -10886629 - L1ME4a LINE L1 -51 6070 5971 214 206 48 0 chr10 134703618 134703681 -10885607 - MER5B DNA MER1_type -2 176 111 3571 174 28 59 chr10 134703710 134703832 -10885456 - L1MB8 LINE L1 -1 6177 6053 2212 97 35 0 chr10 134703832 134704120 -10885168 - AluSx SINE Alu -14 298 1 3571 174 28 59 chr10 134704120 134704202 -10885086 - L1MB8 LINE L1 -125 6053 5970 2308 95 30 0 chr10 134704202 134704498 -10884790 - AluSx SINE Alu -7 305 1 3571 174 28 59 chr10 134704498 134704513 -10884775 - L1MB8 LINE L1 -208 5970 5956 1393 184 45 45 chr10 134704513 134704679 -10884609 - AluJo SINE Alu -24 288 120 238 25 25 25 chr10 134704679 134704719 -10884569 + (TTTTA)n Simple_repeat Simple_repeat 2 41 0 1393 184 45 45 chr10 134704719 134704840 -10884448 - AluJo SINE Alu -191 121 1 3571 174 28 59 chr10 134704840 134705448 -10883840 - L1MB8 LINE L1 -222 5956 5374 2264 123 0 0 chr10 134705488 134705797 -10883491 - AluSc SINE Alu 0 309 1 2057 136 0 17 chr10 134705823 134706125 -10883163 + AluJo SINE Alu 1 297 -15 1458 181 57 4 chr10 134706144 134706409 -10882879 + AluJb SINE Alu 14 292 -20 485 165 78 180 chr10 134706411 134706745 -10882543 - L1MC4 LINE L1 0 8042 7743 201 200 0 22 chr10 134706774 134706819 -10882469 - MER5B DNA MER1_type -110 68 25 834 177 19 0 chr10 134707308 134707466 -10881822 + MER5A DNA MER1_type 29 189 0 245 156 44 0 chr10 134708548 134708593 -10880695 + MER57A LTR ERV1 290 336 -67 276 111 0 0 chr10 134708595 134708640 -10880648 + (A)n Simple_repeat Simple_repeat 1 45 0 2284 108 7 0 chr10 134708685 134708982 -10880306 + AluSx SINE Alu 1 299 -13 214 266 163 54 chr10 134709215 134709418 -10879870 + L2 LINE L2 2662 2886 -428 674 190 51 0 chr10 134709627 134709764 -10879524 - MER3 DNA MER1_type -52 157 14 288 294 88 0 chr10 134709764 134709866 -10879422 + L2 LINE L2 3153 3263 -9 226 330 29 10 chr10 134710122 134710225 -10879063 - L2 LINE L2 -503 2811 2707 180 161 99 123 chr10 134711698 134711779 -10877509 - MIR SINE MIR -111 97 19 367 255 40 33 chr10 134712113 134712255 -10877033 + MIR3 SINE MIR 20 159 -49 263 301 7 7 chr10 134713680 134713816 -10875472 + C-rich Low_complexity Low_complexity 2 137 0 186 43 0 0 chr10 134713938 134713961 -10875327 + (CCG)n Simple_repeat Simple_repeat 2 24 0 1101 138 6 0 chr10 134715824 134715984 -10873304 - FRAM SINE Alu -16 160 1 283 239 294 0 chr10 134715986 134716078 -10873210 - MIR SINE MIR -113 149 31 198 143 0 0 chr10 134716847 134716882 -10872406 + (TGAA)n Simple_repeat Simple_repeat 2 36 0 199 314 77 19 chr10 134717242 134717398 -10871890 - L2 LINE L2 -374 2939 2776 367 297 68 7 chr10 134717650 134717798 -10871490 - MIR SINE MIR -16 246 90 2378 71 0 7 chr10 134718486 134718781 -10870507 - AluY SINE Alu -15 296 4 295 258 81 40 chr10 134718826 134718950 -10870338 - L2 LINE L2 -12 3301 3173 231 310 161 0 chr10 134719655 134719742 -10869546 + MIR3 SINE MIR 101 201 -7 235 306 42 0 chr10 134720364 134720436 -10868852 - L2 LINE L2 -4 3268 3194 369 321 26 42 chr10 134720517 134720707 -10868581 + MIR SINE MIR 68 254 -8 330 67 0 0 chr10 134720714 134720759 -10868529 + (CAT)n Simple_repeat Simple_repeat 3 47 0 340 305 32 41 chr10 134721902 134722124 -10867164 - MIR SINE MIR -17 245 25 1443 236 3 6 chr10 134722130 134722494 -10866794 - L1M4 LINE L1 -3245 2901 2539 256 222 260 0 chr10 134722542 134722642 -10866646 + MIR SINE MIR 37 161 -62 259 278 32 56 chr10 134723892 134724018 -10865270 - MIR3 SINE MIR -5 203 81 1852 156 11 3 chr10 134724674 134724997 -10864291 - AluSx SINE Alu 0 325 1 467 346 42 0 chr10 134725024 134725264 -10864024 - L1ME LINE L1 -338 5783 5534 229 294 67 46 chr10 134725500 134725694 -10863594 - MIR3 SINE MIR -10 198 1 273 162 44 0 chr10 134725785 134725853 -10863435 - Charlie5 DNA MER1_type -41 2571 2501 1705 193 63 0 chr10 134725870 134726249 -10863039 - L1MB7 LINE L1 0 6184 5782 486 252 8 24 chr10 134726464 134726587 -10862701 - MIR3 SINE MIR 0 208 88 2495 86 0 0 chr10 134729267 134729569 -10859719 - AluY SINE Alu -9 302 1 2649 56 0 0 chr10 134730694 134730998 -10858290 - AluY SINE Alu -7 304 1 962 185 6 0 chr10 134731115 134731288 -10858000 + MER45A DNA AcHobo 5 178 0 397 288 54 58 chr10 134731607 134731852 -10857436 + MIR SINE MIR 20 262 0 338 290 84 26 chr10 134732351 134732506 -10856782 - MIR SINE MIR -39 223 60 1062 232 37 37 chr10 134733064 134733418 -10855870 - MER69 DNA AcHobo -4 2522 2169 678 309 105 3 chr10 134733527 134733822 -10855466 - MER69 DNA AcHobo -2128 398 74 2059 238 92 15 chr10 134733937 134733980 -10855308 - MER119 DNA MER1_type 0 583 545 2182 113 48 22 chr10 134733980 134734335 -10854953 + THE1B LTR MaLR 1 364 0 2059 238 92 15 chr10 134734335 134734832 -10854456 - MER119 DNA MER1_type -38 545 1 2417 106 0 0 chr10 134734951 134735254 -10854034 + AluSg SINE Alu 1 303 -7 1588 234 70 25 chr10 134735807 134736375 -10852913 - L1M4 LINE L1 -1411 4735 4142 494 328 22 22 chr10 134736916 134737136 -10852152 - MIR SINE MIR -28 234 14 243 284 0 25 chr10 134737787 134737868 -10851420 - MIR3 SINE MIR -12 196 118 266 326 7 30 chr10 134738503 134738638 -10850650 + MIR SINE MIR 85 216 -46 333 271 0 0 chr10 134739052 134739218 -10850070 + (TG)n Simple_repeat Simple_repeat 2 167 0 218 232 0 12 chr10 134739233 134739315 -10849973 + (TG)n Simple_repeat Simple_repeat 2 82 0 372 203 109 43 chr10 134739342 134739480 -10849808 - MER5C DNA MER1_type -95 229 83 1537 157 141 3 chr10 134739913 134740219 -10849069 - MER7A DNA MER2_type 0 346 1 2101 134 20 0 chr10 134740598 134740904 -10848384 + AluSx SINE Alu 1 312 0 318 236 55 39 chr10 134742457 134742584 -10846704 + MER103 DNA DNA 21 149 -17 354 222 0 0 chr10 134743474 134743546 -10845742 - MIR SINE MIR -111 151 80 2204 124 7 0 chr10 134744640 134744946 -10844342 - AluSx SINE Alu -4 308 1 253 303 0 0 chr10 134746121 134746187 -10843101 + C-rich Low_complexity Low_complexity 6 71 0 975 231 19 5 chr10 134748167 134748383 -10840905 + MER58A DNA MER1_type 4 222 -2 198 0 0 0 chr10 134748538 134748560 -10840728 + (T)n Simple_repeat Simple_repeat 1 22 0 379 296 191 41 chr10 134748743 134749057 -10840231 - L2 LINE L2 0 3313 2953 25 31 0 0 chr10 134749577 134749609 -10839679 + AT_rich Low_complexity Low_complexity 1 32 0 192 298 18 0 chr10 134750076 134750133 -10839155 - L2 LINE L2 0 3313 3256 192 77 0 0 chr10 134750471 134750497 -10838791 + (TTCTCC)n Simple_repeat Simple_repeat 5 30 0 279 256 80 8 chr10 134750698 134750823 -10838465 + L2 LINE L2 756 889 -2425 465 233 281 8 chr10 134751017 134751198 -10838090 + MER45C DNA AcHobo 5 234 -719 1558 238 166 5 chr10 134751349 134751794 -10837494 + MER45C DNA AcHobo 437 953 0 349 256 43 0 chr10 134751794 134751911 -10837377 + L2 LINE L2 900 1021 -2293 409 391 11 5 chr10 134752702 134752886 -10836402 - MIR3 SINE MIR -7 201 17 303 28 0 0 chr10 134753666 134753702 -10835586 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 341 340 160 16 chr10 134754069 134754319 -10834969 + MLT1L LTR MaLR 330 615 0 217 333 191 7 chr10 134754411 134754552 -10834736 + L2 LINE L2 3102 3268 -4 257 333 11 0 chr10 134755909 134756002 -10833286 + MIR SINE MIR 91 184 -78 438 280 179 10 chr10 134757330 134757537 -10831751 - MIR SINE MIR -6 256 15 278 244 107 9 chr10 134757754 134757860 -10831428 + MIR SINE MIR 52 167 -63 235 0 57 0 chr10 134759769 134759804 -10829484 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 247 260 53 120 chr10 134761295 134761445 -10827843 - MIR SINE MIR -18 244 105 185 368 128 40 chr10 134761442 134761771 -10827517 - L2 LINE L2 -6 3307 2950 * 673 304 68 7 chr10 134761938 134762234 -10827054 - L2 LINE L2 -579 2735 2422 362 280 25 0 chr10 134763314 134763432 -10825856 + MIR SINE MIR 31 151 -111 822 219 27 16 chr10 134763510 134763697 -10825591 - MIR SINE MIR -28 234 46 2200 107 3 3 chr10 134763765 134764075 -10825213 + AluSx SINE Alu 1 310 -2 1233 182 100 67 chr10 134764899 134765006 -10824282 + MER58B DNA MER1_type 1 103 -2317 1715 84 17 8 chr10 134765006 134765244 -10824044 - L1PB1 LINE L1 -1 6150 5911 1233 182 100 67 chr10 134765244 134765466 -10823822 + MER58B DNA MER1_type 103 341 0 833 134 8 0 chr10 134765827 134765954 -10823334 + FLAM_A SINE Alu 12 139 -3 2087 112 3 34 chr10 134766016 134766337 -10822951 - AluSx SINE Alu -1 311 1 372 270 70 0 chr10 134767479 134767594 -10821694 - L2 LINE L2 0 3272 3150 442 206 50 50 chr10 134768814 134768955 -10820333 + MIR3 SINE MIR 3 143 -65 1535 171 11 0 chr10 134769376 134769640 -10819648 - AluJb SINE Alu -9 303 37 289 245 11 53 chr10 134770008 134770102 -10819186 + MER117 DNA MER1_type 3 92 -105 1935 122 39 0 chr10 134770131 134770417 -10818871 + AluJb SINE Alu 1 297 -15 656 260 12 17 chr10 134771001 134771174 -10818114 - MIR SINE MIR -32 230 59 265 218 39 0 chr10 134771908 134771986 -10817302 + MER96 DNA MER1_type? 3 83 -92 334 275 11 0 chr10 134772166 134772257 -10817031 + MIR SINE MIR 49 140 -122 1576 187 115 9 chr10 134772564 134772895 -10816393 - MER47A DNA MER2_type 0 366 1 621 278 23 12 chr10 134773921 134774094 -10815194 - MIR SINE MIR -82 180 6 463 312 69 9 chr10 134774847 134775065 -10814223 - MIR SINE MIR -8 254 24 3607 143 32 40 chr10 134775243 134775920 -10813368 + L1MC1 LINE L1 5661 6332 -1 336 301 52 29 chr10 134876993 134877129 -10712159 + MER5B DNA MER1_type 26 164 -14 186 191 0 0 chr10 134879035 134879077 -10710211 + (CA)n Simple_repeat Simple_repeat 1 42 0 204 196 43 0 chr10 134879103 134879149 -10710139 + (CATG)n Simple_repeat Simple_repeat 3 50 0 215 279 0 8 chr10 134879184 134879306 -10709982 + (CA)n Simple_repeat Simple_repeat 2 122 0 1330 63 0 0 chr10 134880415 134880574 -10708714 + AluY SINE Alu 151 309 -2 2280 103 37 0 chr10 134880587 134880920 -10708368 + AluSp SINE Alu 1 344 0 217 267 13 27 chr10 134880998 134881073 -10708215 - L2 LINE L2 -563 2751 2678 620 214 200 0 chr10 134882021 134882166 -10707122 - MER5A DNA MER1_type -15 174 1 2050 109 25 0 chr10 134882286 134882584 -10706704 - AluSx SINE Alu 0 305 1 552 225 27 9 chr10 134883784 134883895 -10705393 + MIR SINE MIR 20 132 -130 383 273 88 104 chr10 134883925 134884185 -10705103 + L2 LINE L2 3058 3313 0 522 0 0 0 chr10 134884298 134884356 -10704932 + (TCTA)n Simple_repeat Simple_repeat 2 59 0 1969 124 35 7 chr10 134884384 134884666 -10704622 - AluSx SINE Alu -22 290 1 986 241 216 13 chr10 134884672 134885127 -10704161 - L2 LINE L2 -14 3299 2750 194 259 35 0 chr10 134885292 134885350 -10703938 + MIR3 SINE MIR 100 159 -49 2287 89 0 4 chr10 134886345 134886654 -10702634 + AluSc SINE Alu 1 308 0 284 339 46 0 chr10 134887748 134887878 -10701410 - MER117 DNA MER1_type -9 188 53 384 111 0 0 chr10 134890052 134890115 -10699173 + (TC)n Simple_repeat Simple_repeat 2 64 0 221 197 14 0 chr10 134890143 134890214 -10699074 + CT-rich Low_complexity Low_complexity 1 72 0 368 329 7 7 chr10 134890238 134890393 -10698895 + CT-rich Low_complexity Low_complexity 2 156 0 207 0 0 0 chr10 134890417 134890440 -10698848 + (TCTCTG)n Simple_repeat Simple_repeat 2 24 0 340 296 124 40 chr10 134890527 134890777 -10698511 - HAL1 LINE L1 -1235 1272 1002 502 276 48 0 chr10 134891329 134891474 -10697814 - MIR SINE MIR -63 199 48 194 169 310 28 chr10 134891733 134891804 -10697484 + MIR SINE MIR 60 146 -62 416 200 105 0 chr10 134891904 134892009 -10697279 + L1MD3 LINE L1 7730 7845 -150 903 97 0 0 chr10 134892014 134892127 -10697161 + AluSg/x SINE Alu 185 297 -13 745 197 8 8 chr10 134892852 134892984 -10696304 + FLAM_A SINE Alu 1 132 -1 247 189 100 33 chr10 134893017 134893107 -10696181 - Looper DNA T2_type -96 1462 1367 * 3945 171 83 19 chr10 134893097 134893985 -10695303 - Looper DNA T2_type -598 960 16 2546 77 0 13 chr10 134894825 134895138 -10694150 - AluSc SINE Alu 0 309 1 238 286 0 55 chr10 134895214 134895305 -10693983 + MIR SINE MIR 165 250 -12 480 277 13 57 chr10 134895319 134895478 -10693810 - MIR SINE MIR -64 198 47 198 347 69 0 chr10 134896466 134896538 -10692750 + L2 LINE L2 3196 3272 0 312 305 8 30 chr10 134899032 134899163 -10690125 - MARNA DNA Mariner -196 390 263 324 289 35 28 chr10 134900425 134900567 -10688721 - MARNA DNA Mariner -165 421 279 500 280 39 16 chr10 134903620 134903802 -10685486 + L1M4 LINE L1 4023 4208 -1938 679 197 8 8 chr10 134905275 134905407 -10683881 + FLAM_C SINE Alu 1 132 -1 268 222 46 98 chr10 134908666 134908819 -10680469 - MER76 LTR ERV -121 567 423 654 279 35 31 chr10 134908841 134909099 -10680189 - MER76 LTR ERV -429 259 1 337 274 54 100 chr10 134911613 134911724 -10677564 - MER76 LTR ERV -37 651 555 1463 236 33 16 chr10 134911724 134912148 -10677140 - MSTB1 LTR MaLR -1 431 1 337 274 54 100 chr10 134912148 134912277 -10677011 - MER76 LTR ERV -133 555 422 * 792 218 37 58 chr10 134912264 134912558 -10676730 - MER76 LTR ERV -400 288 1 1395 172 29 146 chr10 134915185 134915673 -10673615 - MSTB1 LTR MaLR -1 431 1 663 250 40 59 chr10 134915818 134916090 -10673198 - MER76 LTR ERV -421 267 1 301 295 37 83 chr10 134917959 134918070 -10671218 - MER76 LTR ERV -37 651 555 1586 224 36 9 chr10 134918070 134918490 -10670798 - MSTB1 LTR MaLR -1 431 1 301 295 37 83 chr10 134918490 134918619 -10670669 - MER76 LTR ERV -133 555 422 711 248 39 35 chr10 134918642 134918900 -10670388 - MER76 LTR ERV -429 259 1 681 272 35 61 chr10 134921323 134921803 -10667485 - MER76 LTR ERV -72 616 1 337 274 54 100 chr10 134924333 134924444 -10664844 - MER76 LTR ERV -37 651 555 1482 234 33 16 chr10 134924444 134924868 -10664420 - MSTB1 LTR MaLR -1 431 1 337 274 54 100 chr10 134924868 134924997 -10664291 - MER76 LTR ERV -133 555 422 * 792 218 37 58 chr10 134924984 134925278 -10664010 - MER76 LTR ERV -400 288 1 291 216 46 98 chr10 134927882 134928035 -10661253 - MER76 LTR ERV -121 567 423 675 264 35 31 chr10 134928057 134928315 -10660973 - MER76 LTR ERV -429 259 1 329 316 35 65 chr10 134930839 134931070 -10658218 - MER76 LTR ERV -42 646 423 618 267 39 35 chr10 134931092 134931350 -10657938 - MER76 LTR ERV -429 259 1 6400 125 27 13 chr10 134931815 134932848 -10656440 - MER11C LTR ERVK -23 1048 1 329 316 35 65 chr10 134934898 134935129 -10654159 - MER76 LTR ERV -42 646 423 607 267 39 35 chr10 134935151 134935409 -10653879 - MER76 LTR ERV -429 259 1 6372 127 27 13 chr10 134935874 134936907 -10652381 - MER11C LTR ERVK -23 1048 1 329 316 35 65 chr10 134938957 134939188 -10650100 - MER76 LTR ERV -42 646 423 618 267 39 35 chr10 134939210 134939468 -10649820 - MER76 LTR ERV -429 259 1 6400 125 27 13 chr10 134939933 134940966 -10648322 - MER11C LTR ERVK -23 1048 1 760 243 57 8 chr10 134943250 134943497 -10645791 - MER76 LTR ERV -429 259 1 356 335 27 16 chr10 134946025 134946213 -10643075 - MER76 LTR ERV -36 652 463 619 287 57 4 chr10 134946290 134946534 -10642754 - MER76 LTR ERV -429 259 3 577 286 64 38 chr10 134946815 134947081 -10642207 - MLT1K LTR MaLR -2 586 314 3381 193 23 12 chr10 134947471 134948198 -10641090 - L1MB5 LINE L1 -93 6081 5347 333 284 26 0 chr10 134950233 134950349 -10638939 - MER103 DNA DNA -8 158 40 323 336 66 21 chr10 134950796 134951037 -10638251 - L1ME4a LINE L1 -254 5867 5616 263 283 217 8 chr10 134951313 134951627 -10637661 - L2 LINE L2 -212 3060 2692 * 323 318 111 0 chr10 134951625 134951751 -10637537 + L2 LINE L2 3133 3272 0 207 139 0 0 chr10 134951751 134951787 -10637501 + (TGAA)n Simple_repeat Simple_repeat 2 37 0 228 35 0 0 chr10 134951832 134951861 -10637427 + (CA)n Simple_repeat Simple_repeat 2 30 0 242 295 42 6 chr10 134951919 134952085 -10637203 - L1ME LINE L1 -234 5887 5716 3748 189 55 19 chr10 134952254 134952842 -10636446 + L1MB7 LINE L1 5207 5846 -338 2429 104 0 0 chr10 134952842 134953151 -10636137 + AluSq SINE Alu 1 309 -4 3748 189 55 19 chr10 134953151 134953454 -10635834 + L1MB7 LINE L1 5846 6137 -47 195 211 105 0 chr10 134953592 134953649 -10635639 - MIR SINE MIR 0 262 200 748 262 29 5 chr10 134953679 134953885 -10635403 - MIR SINE MIR -49 213 3 247 300 147 7 chr10 134955141 134955291 -10633997 + MIR3 SINE MIR 16 186 -22 251 316 11 42 chr10 134955967 134956062 -10633226 + MIR SINE MIR 71 162 -100 189 305 180 30 chr10 134956944 134957278 -10632010 + L2 LINE L2 2851 3234 -38 31 26 0 0 chr10 134957573 134957611 -10631677 + AT_rich Low_complexity Low_complexity 1 38 0 422 232 28 51 chr10 134958033 134958171 -10631117 + MIR SINE MIR 20 164 -83 1831 171 0 13 chr10 134958340 134958655 -10630633 + AluJo SINE Alu 1 311 -1 984 103 18 6 chr10 134958829 134958994 -10630294 + (TTTC)n Simple_repeat Simple_repeat 2 168 0 2166 108 0 0 chr10 134958999 134959278 -10630010 - AluSx SINE Alu -30 282 4 352 189 11 0 chr10 134959735 134959825 -10629463 - L1MD3 LINE L1 -907 7088 6998 293 340 31 41 chr10 134959825 134960019 -10629269 + L3 LINE CR1 1193 1384 -193 2177 129 0 16 chr10 134960029 134960340 -10628948 - AluSx SINE Alu -6 306 1 209 327 39 45 chr10 134961067 134961223 -10628065 + L3 LINE CR1 1396 1550 -27 264 174 0 0 chr10 134962078 134962124 -10627164 - MER69 DNA AcHobo -2 2524 2479 463 167 87 120 chr10 134962181 134962331 -10626957 - MER69 DNA AcHobo -2381 145 1 598 158 0 0 chr10 134962491 134962586 -10626702 - MER81 DNA DNA -19 95 1 1828 138 16 44 chr10 134962907 134963227 -10626061 - AluJo SINE Alu -1 311 1 271 340 155 8 chr10 134963351 134963521 -10625767 - MIR SINE MIR -15 247 54 2129 86 78 5 chr10 134963787 134964154 -10625134 - LTR7 LTR ERV1 0 450 1 557 262 70 0 chr10 134965302 134965474 -10623814 + MIR SINE MIR 9 192 -70 333 290 97 0 chr10 134966338 134966483 -10622805 - MER5B DNA MER1_type -9 169 11 267 324 21 56 chr10 134968134 134968276 -10621012 + MIR SINE MIR 126 262 0 288 76 112 8 chr10 134968478 134968735 -10620553 + (CTG)n Simple_repeat Simple_repeat 1 283 0 218 261 0 0 chr10 134968980 134969026 -10620262 - L2 LINE L2 -1 3271 3226 309 274 0 0 chr10 134969886 134969959 -10619329 + (GGGTG)n Simple_repeat Simple_repeat 2 74 0 2297 116 0 0 chr10 134970094 134970395 -10618893 - AluSx SINE Alu -11 301 1 498 75 0 0 chr10 134971657 134971724 -10617564 + (TTCA)n Simple_repeat Simple_repeat 4 70 0 383 259 136 37 chr10 134972363 134972525 -10616763 + MER5B DNA MER1_type 1 178 0 284 235 118 78 chr10 134972832 134972985 -10616303 - MIR SINE MIR -76 186 28 1372 216 54 14 chr10 134974033 134974403 -10614885 - MER63B DNA MER1_type -51 385 1 575 214 27 9 chr10 134975923 134976035 -10613253 - MER81 DNA DNA 0 114 1 2373 281 49 20 chr10 134976111 134977625 -10611663 - L1M2 LINE L1 -4171 3395 12 418 134 12 12 chr10 134977795 134977877 -10611411 + T-rich Low_complexity Low_complexity 2 83 0 1070 142 134 17 chr10 134979136 134979368 -10609920 - Tigger7 DNA MER2_type 0 2491 2233 * 1115 208 20 4 chr10 134979361 134979606 -10609682 - Tigger7 DNA MER2_type -264 469 221 315 369 30 15 chr10 134980711 134980909 -10608379 + L1MC/D LINE L1 5286 5486 -2322 1133 223 15 0 chr10 134980989 134981249 -10608039 - L1M4 LINE L1 -354 5824 5561 246 290 59 76 chr10 134981463 134981657 -10607631 + MIR SINE MIR 18 211 -51 197 409 32 0 chr10 134984015 134984108 -10605180 + MIR3 SINE MIR 67 162 -46 206 321 123 9 chr10 134985510 134985616 -10603672 - MIR SINE MIR -12 250 133 2130 144 0 3 chr10 134985980 134986293 -10602995 - AluSx SINE Alu 0 312 1 255 79 0 0 chr10 134987296 134987334 -10601954 + (TGAA)n Simple_repeat Simple_repeat 3 40 0 1080 133 50 67 chr10 134990913 134991153 -10598135 - MER4C-int LTR ERV1 -5487 1271 1036 1860 156 58 99 chr10 134991160 134991782 -10597506 - MER4C-int LTR ERV1 -3525 1598 1190 351 176 0 15 chr10 134991848 134991916 -10597372 - MER34C LTR ERV1 -360 225 159 1190 86 0 0 chr10 134991951 134992126 -10597162 - AluY SINE Alu 0 306 132 354 231 0 26 chr10 134992148 134992226 -10597062 - MER4C-int LTR ERV1 -3369 2894 2819 1454 199 93 23 chr10 134992234 134992647 -10596641 - MER4C-int LTR ERV1 -4061 2270 1242 314 183 46 30 chr10 134992656 134992808 -10596480 - MER4C-int LTR ERV1 -5766 832 613 2233 146 53 32 chr10 134992994 134993478 -10595810 - MER4C-int LTR ERV1 -6043 555 12 925 91 176 11 chr10 134993493 134993580 -10595708 - MER4C LTR ERV1 0 465 394 258 81 0 0 chr10 134993580 134993617 -10595671 + (CA)n Simple_repeat Simple_repeat 2 38 0 925 91 176 11 chr10 134993617 134993716 -10595572 - MER4C LTR ERV1 -71 394 248 1626 91 8 16 chr10 134993949 134994192 -10595096 - MER4C LTR ERV1 -224 241 1 244 229 16 0 chr10 134994747 134994808 -10594480 - MLT1L LTR MaLR -8 607 546 225 315 65 25 chr10 134996119 134996398 -10592890 + L1MC/D LINE L1 5295 5584 -775 937 242 44 0 chr10 134996401 134996649 -10592639 - L1M4 LINE L1 -360 5824 5566 276 274 49 51 chr10 134996858 134997041 -10592247 + MIR SINE MIR 18 200 -62 227 313 15 37 chr10 134998158 134998292 -10590996 + CT-rich Low_complexity Low_complexity 2 132 0 267 238 183 63 chr10 134998691 134998817 -10590471 + MIR SINE MIR 80 220 -42 372 333 43 6 chr10 134999336 134999498 -10589790 - MIR SINE MIR -90 172 5 226 284 30 30 chr10 134999762 134999829 -10589459 + MER81 DNA DNA 48 114 0 233 200 63 0 chr10 135003969 135004064 -10585224 + (TA)n Simple_repeat Simple_repeat 2 102 0 184 294 0 0 chr10 135005429 135005480 -10583808 + MIR SINE MIR 104 154 -108 184 294 0 0 chr10 135005606 135005657 -10583631 + MIR SINE MIR 104 154 -108 180 0 0 0 chr10 135006648 135006668 -10582620 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 2165 124 0 0 chr10 135006675 135006974 -10582314 - AluSx SINE Alu -13 299 1 234 290 29 0 chr10 135007321 135007390 -10581898 + MER81 DNA DNA 1 71 -43 1472 237 79 55 chr10 135008384 135008962 -10580326 + MER92B LTR ERV1 1 596 -40 2457 106 16 25 chr10 135008962 135009329 -10579959 - THE1B LTR MaLR 0 364 1 1472 237 79 55 chr10 135009329 135009371 -10579917 + MER92B LTR ERV1 596 636 0 2633 128 31 10 chr10 135010298 135010713 -10578575 - MSTA LTR MaLR -4 424 1 2279 128 0 0 chr10 135010760 135011065 -10578223 - AluSx SINE Alu -7 305 1 2555 132 5 15 chr10 135011535 135011928 -10577360 - MSTA LTR MaLR 0 428 40 253 83 0 62 chr10 135011919 135011967 -10577321 - MSTA LTR MaLR -333 95 51 * 291 88 35 53 chr10 135011967 135012024 -10577264 - MSTA LTR MaLR -333 95 40 291 88 35 53 chr10 135012015 135012072 -10577216 - MSTA LTR MaLR -333 95 40 268 123 35 53 chr10 135012063 135012120 -10577168 - MSTA LTR MaLR -333 95 40 * 444 140 0 112 chr10 135012111 135012218 -10577070 - MSTA LTR MaLR -333 95 1 404 288 148 11 chr10 135012805 135013070 -10576218 - L2 LINE L2 -271 3042 2740 1694 206 80 25 chr10 135013070 135013512 -10575776 - MLT1C LTR MaLR -1 449 1 311 290 206 8 chr10 135013512 135013643 -10575645 - L2 LINE L2 -574 2740 2584 368 290 22 0 chr10 135013807 135013945 -10575343 - MIR SINE MIR -43 219 79 241 266 0 0 chr10 135014188 135014252 -10575036 + (TA)n Simple_repeat Simple_repeat 1 64 0 248 344 55 12 chr10 135014345 135014383 -10574905 - MIR SINE MIR -16 246 211 1007 176 135 0 chr10 135014383 135014576 -10574712 - MER20 DNA MER1_type 0 219 1 248 344 55 12 chr10 135014576 135014700 -10574588 - MIR SINE MIR -51 211 77 210 71 0 0 chr10 135016224 135016252 -10573036 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 1910 146 0 14 chr10 135017236 135017558 -10571730 - AluSx SINE Alu 0 318 1 1978 147 7 0 chr10 135017854 135018146 -10571142 - AluSx SINE Alu -18 294 1 295 336 22 7 chr10 135018919 135019056 -10570232 - MIR3 SINE MIR -34 174 36 2785 164 82 6 chr10 135019742 135020242 -10569046 + MER41D LTR ERV1 20 557 0 1982 236 74 14 chr10 135021352 135021851 -10567437 + MLT1H LTR MaLR 21 549 0 2926 6 0 25 chr10 135023202 135023527 -10565761 + AluYb8 SINE Alu 1 317 -1 434 227 11 0 chr10 135024929 135025017 -10564271 + L1MC4a LINE L1 5535 5623 -2185 446 279 71 45 chr10 135025022 135025359 -10563929 + L1MC4a LINE L1 5668 6013 -1795 212 227 0 0 chr10 135025794 135025838 -10563450 + L2 LINE L2 3261 3304 -9 288 262 203 20 chr10 135025867 135026069 -10563219 + L1ME4a LINE L1 5794 6032 -89 24 67 0 0 chr10 135026575 135026620 -10562668 + AT_rich Low_complexity Low_complexity 1 45 0 222 191 0 0 chr10 135026621 135026668 -10562620 + (CATATA)n Simple_repeat Simple_repeat 3 49 0 1706 201 36 68 chr10 135026668 135027059 -10562229 - MLT2D LTR ERVL -40 480 1 841 247 98 24 chr10 135027140 135027837 -10561451 - L1ME3A LINE L1 -220 5950 5073 471 187 0 0 chr10 135027856 135027963 -10561325 + (CA)n Simple_repeat Simple_repeat 2 108 0 2005 148 9 15 chr10 135029321 135029646 -10559642 - THE1B LTR MaLR -41 323 1 346 312 108 6 chr10 135029747 135029904 -10559384 - MIR SINE MIR -27 235 63 23 33 0 0 chr10 135030073 135030103 -10559185 + AT_rich Low_complexity Low_complexity 1 30 0 864 160 45 13 chr10 135030399 135030555 -10558733 + FRAM SINE Alu 10 170 -6 21 0 0 0 chr10 135031404 135031425 -10557863 + AT_rich Low_complexity Low_complexity 1 21 0 377 212 38 0 chr10 135032006 135032412 -10556876 + (CA)n Simple_repeat Simple_repeat 1 421 0 181 297 27 14 chr10 135033426 135033500 -10555788 + L2 LINE L2 3238 3312 -1 208 321 46 9 chr10 135034537 135034646 -10554642 + MER5A DNA MER1_type 73 185 -4 217 246 0 0 chr10 135034906 135034963 -10554325 + T-rich Low_complexity Low_complexity 1 57 0 2378 82 0 3 chr10 135035298 135035589 -10553699 + AluY SINE Alu 1 290 -21 195 199 26 32 chr10 135036132 135036288 -10553000 + (TG)n Simple_repeat Simple_repeat 1 155 0 359 176 36 6 chr10 135036348 135036513 -10552775 + (TG)n Simple_repeat Simple_repeat 1 170 0 212 184 39 0 chr10 135036546 135036649 -10552639 + (TG)n Simple_repeat Simple_repeat 1 107 0 1421 121 0 60 chr10 135037034 135037305 -10551983 + AluSx SINE Alu 52 307 0 325 296 106 50 chr10 135037331 135037510 -10551778 - MER5A DNA MER1_type 0 189 1 293 328 161 0 chr10 135037661 135037835 -10551453 - MIR SINE MIR -43 219 18 298 316 53 16 chr10 135038272 135038462 -10550826 + MIR SINE MIR 66 262 0 537 220 17 0 chr10 135039173 135039291 -10549997 - MER45A DNA AcHobo 0 178 59 1105 147 76 0 chr10 135040367 135040551 -10548737 + MER20 DNA MER1_type 22 219 0 348 195 263 0 chr10 135041363 135041481 -10547807 - MER5A DNA MER1_type 0 189 41 287 188 119 59 chr10 135041518 135041619 -10547669 + MER5A DNA MER1_type 3 109 -80 2220 108 3 3 chr10 135042570 135042866 -10546422 + AluSc SINE Alu 1 296 -13 262 140 18 88 chr10 135043036 135043080 -10546208 + MER63B DNA MER1_type 1 40 -396 368 129 30 3 chr10 135043080 135043221 -10546067 + MER53 DNA DNA 3 189 0 785 260 55 29 chr10 135043312 135043585 -10545703 - L1PA15 LINE L1 0 6165 5886 797 156 1 1 chr10 135043739 135043874 -10545414 - L1PA15 LINE L1 -517 5648 5514 834 245 60 18 chr10 135044450 135044752 -10544536 - L1ME1 LINE L1 -4 6162 5850 304 178 119 59 chr10 135044921 135045022 -10544266 - MER5A DNA MER1_type -80 109 3 367 243 228 0 chr10 135045065 135045201 -10544087 + MER5A DNA MER1_type 23 189 0 195 274 0 65 chr10 135047428 135047490 -10541798 - MIR SINE MIR -122 140 83 192 40 0 0 chr10 135047505 135047530 -10541758 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 193 306 14 0 chr10 135047753 135047825 -10541463 - MIR SINE MIR -6 256 184 2228 147 98 9 chr10 135049574 135050003 -10539285 + MLT1C LTR MaLR 1 467 0 743 178 5 92 chr10 135050287 135050472 -10538816 + MER5B DNA MER1_type 10 178 0 302 281 94 52 chr10 135052025 135052217 -10537071 + MIR SINE MIR 21 220 -42 189 319 29 0 chr10 135052492 135052561 -10536727 - L2 LINE L2 -3165 149 79 215 284 0 0 chr10 135052686 135052753 -10536535 + MIR SINE MIR 35 101 -161 274 254 120 82 chr10 135053601 135053967 -10535321 + L1ME4a LINE L1 5731 6110 -11 304 241 68 19 chr10 135054148 135054263 -10535025 - MIR SINE MIR -66 142 38 267 31 0 0 chr10 135054278 135054310 -10534978 + (TTATG)n Simple_repeat Simple_repeat 3 34 0 528 309 68 26 chr10 135054646 135054957 -10534331 + L2 LINE L2 2989 3312 -1 2200 83 0 17 chr10 135055642 135055932 -10533356 - AluY SINE Alu 0 311 27 362 278 33 60 chr10 135057130 135057281 -10532007 - MIR SINE MIR -70 192 46 497 326 83 17 chr10 135059563 135059793 -10529495 + MIR SINE MIR 18 262 0 1445 216 54 14 chr10 135061571 135061941 -10527347 + MER63B DNA MER1_type 1 385 -51 274 235 118 78 chr10 135062989 135063142 -10526146 + MIR SINE MIR 28 186 -76 268 290 136 37 chr10 135063449 135063611 -10525677 + MER5B DNA MER1_type 1 178 0 462 79 0 0 chr10 135064250 135064313 -10524975 + (TGAA)n Simple_repeat Simple_repeat 4 66 0 2083 127 0 0 chr10 135065575 135065874 -10523414 + AluSx SINE Alu 1 299 -13 309 274 0 0 chr10 135066009 135066082 -10523206 + (CACCC)n Simple_repeat Simple_repeat 2 74 0 221 261 0 0 chr10 135066942 135066988 -10522300 + L2 LINE L2 3226 3271 -1 268 76 111 10 chr10 135067233 135067434 -10521854 + (CAG)n Simple_repeat Simple_repeat 1 221 0 268 324 21 56 chr10 135067636 135067778 -10521510 - MIR SINE MIR 0 262 126 340 275 99 0 chr10 135069428 135069559 -10519729 + MER5B DNA MER1_type 11 154 -24 502 279 70 0 chr10 135070437 135070609 -10518679 - MIR SINE MIR -70 192 9 2238 89 78 5 chr10 135071757 135072124 -10517164 + LTR7 LTR ERV1 1 450 0 273 314 167 19 chr10 135072390 135072560 -10516728 + MIR SINE MIR 54 247 -15 1675 138 16 44 chr10 135072684 135073004 -10516284 + AluJo SINE Alu 1 311 -1 637 158 0 0 chr10 135073325 135073420 -10515868 + MER81 DNA DNA 1 95 -19 499 167 87 120 chr10 135073580 135073730 -10515558 + MER69 DNA AcHobo 1 145 -2381 303 152 0 0 chr10 135073787 135073833 -10515455 + MER69 DNA AcHobo 2479 2524 -2 201 327 39 45 chr10 135074689 135074845 -10514443 - L3 LINE CR1 -27 1550 1396 2025 129 0 16 chr10 135075573 135075884 -10513404 + AluSx SINE Alu 1 306 -6 267 288 32 56 chr10 135075894 135076019 -10513269 - L3 LINE CR1 -193 1384 1263 349 211 11 0 chr10 135076098 135076188 -10513100 + L1MD3 LINE L1 6998 7088 -907 2098 117 0 0 chr10 135076645 135076944 -10512344 + AluSx SINE Alu 4 302 -10 990 302 63 44 chr10 135076949 135077658 -10511630 - L2 LINE L2 -163 3150 2425 488 252 43 0 chr10 135077717 135077832 -10511456 + MIR SINE MIR 97 216 -46 924 279 5 0 chr10 135077850 135078072 -10511216 + MER58A DNA MER1_type 1 223 -1 284 203 0 63 chr10 135078133 135078212 -10511076 + MIR SINE MIR 183 256 -6 311 284 21 21 chr10 135078291 135078386 -10510902 - MIR SINE MIR -95 113 19 543 235 8 0 chr10 135078630 135078749 -10510539 + L1PA10 LINE L1 6035 6154 -14 207 0 0 0 chr10 135078760 135078783 -10510505 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 23 0 0 0 chr10 135079717 135079740 -10509548 + AT_rich Low_complexity Low_complexity 1 23 0 384 77 0 0 chr10 135079787 135079839 -10509449 + (CA)n Simple_repeat Simple_repeat 2 53 0 2323 65 0 0 chr10 135079984 135080275 -10509013 + AluY SINE Alu 1 291 -20 669 172 192 7 chr10 135080383 135080534 -10508754 + MER20 DNA MER1_type 1 179 -40 283 343 105 49 chr10 135081430 135081736 -10507552 - L2 LINE L2 -11 3302 2980 262 295 28 124 chr10 135083668 135083885 -10505403 + MIR SINE MIR 21 216 -46 408 260 107 30 chr10 135084419 135084588 -10504700 + Charlie8 DNA MER1_type 62 243 -2174 213 254 70 14 chr10 135084614 135084653 -10504635 + L2 LINE L2 2281 2323 -991 357 257 293 7 chr10 135084653 135084793 -10504495 - MER5A DNA MER1_type -2 187 8 * 423 262 19 19 chr10 135084789 135084896 -10504392 - MIR SINE MIR -72 136 30 18973 29 0 0 chr10 135085740 135088735 -10500553 - L1PA3 LINE L1 -3 6152 3158 1896 176 9 19 chr10 135088735 135089156 -10500132 + L1P LINE L1 2110 2526 -3620 421 342 25 12 chr10 135089887 135090048 -10499240 - MIR SINE MIR -58 150 28 469 198 80 99 chr10 135090079 135090241 -10499047 + MER103 DNA DNA 3 161 -5 21 0 0 0 chr10 135090771 135090792 -10498496 + AT_rich Low_complexity Low_complexity 1 21 0 792 180 23 0 chr10 135091201 135091329 -10497959 + L2 LINE L2 3183 3313 0 295 385 8 0 chr10 135095244 135095374 -10493914 - MIR SINE MIR -10 252 122 282 95 0 0 chr10 135096201 135096243 -10493045 + (TG)n Simple_repeat Simple_repeat 1 42 0 2220 110 0 0 chr10 135097025 135097326 -10491962 - AluSx SINE Alu -11 301 1 391 138 28 66 chr10 135098244 135098425 -10490863 + CT-rich Low_complexity Low_complexity 4 177 0 548 294 20 86 chr10 135099914 135100206 -10489082 + L2 LINE L2 3036 3308 -5 258 170 0 0 chr10 135100571 135100618 -10488670 - MADE1 DNA Mariner -33 47 1 940 214 32 59 chr10 135100717 135100937 -10488351 - MER20 DNA MER1_type 0 219 6 250 309 0 0 chr10 135101658 135101726 -10487562 + (TATATG)n Simple_repeat Simple_repeat 2 69 0 271 353 155 13 chr10 135101793 135102102 -10487186 + L3 LINE CR1 1183 1535 -42 1985 165 9 14 chr10 135103455 135103801 -10485487 + MER2 DNA MER2_type 1 344 0 376 113 19 0 chr10 135104620 135104673 -10484615 - MER45C DNA AcHobo 0 953 900 * 1500 246 69 19 chr10 135104669 135105087 -10484201 - MER45C DNA AcHobo -320 633 195 797 246 6 0 chr10 135105469 135105644 -10483644 - MER5B DNA MER1_type 0 178 3 409 312 18 3 chr10 135106617 135106749 -10482539 + MIR SINE MIR 30 160 -62 2760 23 3 0 chr10 135107013 135107320 -10481968 + AluY SINE Alu 1 308 -3 238 277 47 113 chr10 135107458 135107766 -10481522 + L2 LINE L2 3021 3272 0 332 230 23 11 chr10 135109553 135109640 -10479648 + MIR SINE MIR 77 164 -98 1476 243 69 65 chr10 135111892 135112117 -10477171 + MLT1H1 LTR MaLR 1 224 -331 1857 110 80 0 chr10 135112117 135112403 -10476885 + AluSx SINE Alu 1 307 0 1476 243 69 65 chr10 135112403 135112727 -10476561 + MLT1H1 LTR MaLR 224 553 -2 194 329 0 25 chr10 135113036 135113115 -10476173 + MIR SINE MIR 49 125 -137 564 241 60 18 chr10 135113271 135113437 -10475851 + MIR SINE MIR 19 191 -71 449 244 53 0 chr10 135113564 135113695 -10475593 + MIR SINE MIR 89 226 -36 290 282 103 8 chr10 135114026 135114143 -10475145 - MER5A DNA MER1_type -27 162 35 196 371 29 0 chr10 135114835 135114905 -10474383 - L2 LINE L2 -50 3222 3151 270 0 0 0 chr10 135115157 135115187 -10474101 + (CA)n Simple_repeat Simple_repeat 1 30 0 203 0 37 0 chr10 135117228 135117255 -10472033 + (TG)n Simple_repeat Simple_repeat 2 29 0 322 323 58 28 chr10 135117298 135117442 -10471846 - MIR SINE MIR -66 142 1 488 221 175 0 chr10 135118802 135118956 -10470332 + MIR SINE MIR 82 262 0 668 280 29 25 chr10 135119508 135119747 -10469541 - MIR SINE MIR -15 247 8 190 246 53 18 chr10 135120649 135120706 -10468582 - MER5A DNA MER1_type -76 113 55 266 104 0 21 chr10 135120732 135120780 -10468508 + (TC)n Simple_repeat Simple_repeat 1 47 0 382 211 19 62 chr10 135120846 135121007 -10468281 + L1MD2 LINE L1 4314 4467 -1679 * 1695 213 38 14 chr10 135121005 135121371 -10467917 + L1MD2 LINE L1 5463 5837 -522 180 0 0 0 chr10 135121382 135121402 -10467886 + (CAA)n Simple_repeat Simple_repeat 2 21 0 5736 149 15 15 chr10 135121404 135122393 -10466895 + L1MA7 LINE L1 5303 6291 0 2017 118 42 0 chr10 135122867 135123154 -10466134 - AluSc SINE Alu -10 299 1 304 273 0 13 chr10 135123442 135123519 -10465769 + (TCTG)n Simple_repeat Simple_repeat 3 78 0 472 268 56 0 chr10 135124001 135124143 -10465145 + L1ME1 LINE L1 6015 6164 -2 1981 147 6 19 chr10 135124811 135125125 -10464163 + AluSx SINE Alu 1 310 -2 334 239 0 65 chr10 135125142 135125234 -10464054 + L2 LINE L2 3228 3313 0 435 280 50 67 chr10 135125806 135126045 -10463243 - MER102a DNA MER1_type -5 325 91 689 263 49 45 chr10 135126821 135127045 -10462243 + MIR SINE MIR 28 252 -10 365 277 155 7 chr10 135127678 135127826 -10461462 + MIR SINE MIR 93 262 0 186 43 0 0 chr10 135127969 135127992 -10461296 + (TG)n Simple_repeat Simple_repeat 1 23 0 187 219 31 31 chr10 135128021 135128085 -10461203 - MIR SINE MIR -39 223 160 459 375 8 4 chr10 135128405 135128640 -10460648 - MIR SINE MIR -12 250 15 242 295 11 32 chr10 135129209 135129304 -10459984 + MIR SINE MIR 97 189 -73 406 320 27 18 chr10 135130505 135130724 -10458564 - MIR SINE MIR 0 262 42 3039 109 96 60 chr10 135130789 135131360 -10457928 + LTR14B LTR ERVK 17 608 0 1263 300 63 19 chr10 135131820 135132501 -10456787 + HAL1 LINE L1 801 1511 -996 232 342 63 45 chr10 135132616 135132838 -10456450 + MIR SINE MIR 34 259 -3 36 23 0 0 chr10 135133755 135133798 -10455490 + AT_rich Low_complexity Low_complexity 1 43 0 2235 269 59 14 chr10 135133920 135134514 -10454774 + MLT1E2 LTR MaLR 1 621 -5 4411 266 62 15 chr10 135134517 135136136 -10453152 + L1MEc LINE L1 62 1756 -4640 707 159 81 143 chr10 135136134 135136335 -10452953 + L1MEc LINE L1 2039 2251 -4145 * 1514 239 55 58 chr10 135136335 135136901 -10452387 + MLT1F1 LTR MaLR 2 565 -2 707 159 81 143 chr10 135136901 135137042 -10452246 + L1MEc LINE L1 2251 2359 -4037 1944 154 7 3 chr10 135137042 135137341 -10451947 + AluSx SINE Alu 1 300 -12 707 159 81 143 chr10 135137341 135137369 -10451919 + L1MEc LINE L1 2359 2387 -4009 371 330 100 5 chr10 135138159 135138359 -10450929 - MIR SINE MIR -7 255 37 531 267 102 31 chr10 135140020 135140275 -10449013 - ORSL DNA AcHobo 0 275 3 207 359 76 8 chr10 135140831 135140962 -10448326 + MIR3 SINE MIR 10 149 -59 2340 82 0 41 chr10 135141251 135141569 -10447719 + AluY SINE Alu 1 305 -6 2232 124 0 0 chr10 135142634 135142940 -10446348 + AluSx SINE Alu 5 310 -2 24 0 0 0 chr10 135145710 135145734 -10443554 + AT_rich Low_complexity Low_complexity 1 24 0 1494 227 50 26 chr10 135145931 135146354 -10442934 + MER70B LTR ERVL 20 452 -126 256 292 10 10 chr10 135147106 135147202 -10442086 - MER103 DNA DNA -9 157 62 459 266 9 9 chr10 135148848 135148961 -10440327 - L2 LINE L2 -1 3312 3200 2195 113 0 38 chr10 135149200 135149520 -10439768 + AluSx SINE Alu 1 308 -4 769 148 37 7 chr10 135149627 135149647 -10439641 + L1MB5 LINE L1 5854 5872 -302 2482 71 0 7 chr10 135149647 135149956 -10439332 + AluY SINE Alu 1 307 -4 769 148 37 7 chr10 135149956 135150070 -10439218 + L1MB5 LINE L1 5872 5992 -182 437 327 35 10 chr10 135150214 135150413 -10438875 - MIR SINE MIR -11 251 48 183 162 0 0 chr10 135150586 135150623 -10438665 + (TTTA)n Simple_repeat Simple_repeat 1 37 0 276 341 24 0 chr10 135151190 135151313 -10437975 + MIR SINE MIR 88 213 -49 537 168 113 133 chr10 135151342 135151522 -10437766 - Charlie5 DNA MER1_type -4 2620 2438 1864 118 62 28 chr10 135151522 135151811 -10437477 - AluSg SINE Alu -11 299 1 537 168 113 133 chr10 135151811 135151834 -10437454 - Charlie5 DNA MER1_type -186 2438 2416 1942 153 18 3 chr10 135151834 135152167 -10437121 - L1MA10 LINE L1 0 6334 5997 537 168 113 133 chr10 135152167 135152218 -10437070 - Charlie5 DNA MER1_type -208 2416 2370 1850 191 65 51 chr10 135153559 135154051 -10435237 + MLT1D LTR MaLR 7 505 0 308 247 11 45 chr10 135154926 135155104 -10434184 + (TTATA)n Simple_repeat Simple_repeat 5 176 0 865 294 56 54 chr10 135155461 135155634 -10433654 - L2 LINE L2 0 3313 3142 2202 115 3 7 chr10 135155634 135155938 -10433350 + AluSx SINE Alu 1 303 -9 865 294 56 54 chr10 135155938 135156650 -10432638 - L2 LINE L2 -171 3142 2425 436 252 43 0 chr10 135156709 135156824 -10432464 + MIR SINE MIR 97 216 -46 925 279 5 0 chr10 135156842 135157064 -10432224 + MER58A DNA MER1_type 1 223 -1 245 190 13 76 chr10 135157125 135157204 -10432084 + MIR SINE MIR 183 256 -6 858 19 0 0 chr10 135157349 135157454 -10431834 - L1P LINE L1 -2884 3262 3158 * 8749 29 1 0 chr10 135157452 135158497 -10430791 + L1P LINE L1 2108 3153 -2993 304 226 38 38 chr10 135159142 135159248 -10430040 + L2 LINE L2 3208 3313 0 2111 151 6 26 chr10 135159692 135160036 -10429252 + MER1B DNA MER1_type 1 337 0 411 231 154 0 chr10 135160451 135160581 -10428707 + MIR3 SINE MIR 4 153 -55 226 174 203 0 chr10 135160605 135160674 -10428614 + MER5A DNA MER1_type 19 101 -88 1934 155 14 0 chr10 135163182 135163478 -10425810 - AluSp SINE Alu -13 300 1 21 0 0 0 chr10 135164038 135164059 -10425229 + AT_rich Low_complexity Low_complexity 1 21 0 329 150 0 67 chr10 135167478 135167538 -10421750 + MLT1J2 LTR MaLR 389 444 -6 370 100 50 0 chr10 135167892 135167952 -10421336 + AluSp/q SINE Alu 241 303 0 3405 16 0 0 chr10 135169310 135169693 -10419595 + L1PA2 LINE L1 5773 6155 0 182 62 31 0 chr10 135169699 135169731 -10419557 + (TAAAA)n Simple_repeat Simple_repeat 2 34 0 630 292 57 45 chr10 135169906 135170331 -10418957 - LTR16A LTR ERVL -6 444 15 563 265 67 48 chr10 135170488 135170783 -10418505 - L1MDa LINE L1 -5804 736 404 196 311 38 55 chr10 135171067 135171302 -10417986 + L2 LINE L2 3031 3261 -52 279 54 0 0 chr10 135172085 135172122 -10417166 + (TCCA)n Simple_repeat Simple_repeat 3 39 0 22 0 0 0 chr10 135174664 135174686 -10414602 + GC_rich Low_complexity Low_complexity 1 22 0 468 0 0 0 chr10 135174960 135175012 -10414276 + (CA)n Simple_repeat Simple_repeat 2 53 0 1165 253 67 26 chr10 135175299 135175687 -10413601 + L1ME2 LINE L1 5617 6020 -144 225 121 0 0 chr10 135175687 135175720 -10413568 + MER3 DNA MER1_type 16 48 -161 286 227 171 0 chr10 135175721 135175809 -10413479 + L1ME1 LINE L1 6058 6160 -6 1460 179 34 11 chr10 135176554 135176865 -10412423 + AluJb SINE Alu 15 331 0 373 239 81 94 chr10 135178108 135178342 -10410946 + MER106A DNA MER1_type 6 236 0 363 241 117 14 chr10 135180077 135180222 -10409066 - MER113 DNA MER1_type? -28 493 334 3313 255 50 6 chr10 135180229 135181404 -10407884 - L1MEc LINE L1 -3020 3195 2012 509 211 14 14 chr10 135181447 135181594 -10407694 - MER113 DNA MER1_type? -248 273 127 2425 178 22 40 chr10 135182654 135183149 -10406139 - MER66B LTR ERV1 0 486 1 223 243 40 54 chr10 135184128 135184202 -10405086 + MER5A DNA MER1_type 114 186 -3 796 255 65 25 chr10 135184252 135184574 -10404714 + L1MDa LINE L1 238 572 -5968 610 263 16 21 chr10 135186945 135187135 -10402153 + MER5A DNA MER1_type 1 189 0 619 271 54 5 chr10 135188097 135188300 -10400988 + MIR SINE MIR 48 260 -2 867 172 21 52 chr10 135188460 135188652 -10400636 + MER5A DNA MER1_type 4 189 0 375 242 137 33 chr10 135188661 135188814 -10400474 + MIR SINE MIR 19 187 -75 212 236 18 0 chr10 135188861 135188916 -10400372 - MER5B DNA MER1_type -5 173 118 483 262 16 0 chr10 135188951 135189077 -10400211 - MER5B DNA MER1_type -47 131 4 352 333 9 0 chr10 135189082 135189190 -10400098 + MIR SINE MIR 12 120 -142 180 77 0 0 chr10 135189270 135189296 -10399992 + (CAT)n Simple_repeat Simple_repeat 1 26 0 3361 211 21 15 chr10 135189824 135190945 -10398343 - L1ME LINE L1 -481 5685 4562 3873 176 58 7 chr10 135190976 135191519 -10397769 + L1MB8 LINE L1 5260 5852 -326 1769 174 68 0 chr10 135191519 135191841 -10397447 + MER2 DNA MER2_type 1 344 0 3873 176 58 7 chr10 135191841 135192036 -10397252 + L1MB8 LINE L1 5852 6036 -142 297 75 0 0 chr10 135192037 135192077 -10397211 + (TA)n Simple_repeat Simple_repeat 2 41 0 229 167 12 37 chr10 135192119 135192281 -10397007 + (TA)n Simple_repeat Simple_repeat 1 158 0 1498 205 0 24 chr10 135192292 135192580 -10396708 - AluJo SINE Alu -31 281 1 970 98 13 0 chr10 135192587 135192740 -10396548 + L1MB7 LINE L1 6030 6184 0 945 147 0 0 chr10 135192830 135192966 -10396322 + AluJb SINE Alu 1 136 -176 2507 74 0 0 chr10 135193321 135193619 -10395669 - AluSg SINE Alu -12 298 1 319 289 48 16 chr10 135193714 135193901 -10395387 - L1ME LINE L1 -419 5702 5510 317 291 90 49 chr10 135194807 135195303 -10393985 - L2 LINE L2 -48 3265 2753 1608 190 108 9 chr10 135199892 135200328 -10388960 + L1M4 LINE L1 1003 1481 -5061 1204 244 84 41 chr10 135200314 135200641 -10388647 + L1MCa LINE L1 6 356 -6070 * 198 0 0 0 chr10 135200641 135200663 -10388625 + (TTTTG)n Simple_repeat Simple_repeat 4 25 0 1204 244 84 41 chr10 135200663 135200749 -10388539 + L1MCa LINE L1 356 437 -5989 3327 208 87 10 chr10 135200749 135201447 -10387841 - L1MDa LINE L1 -5774 766 15 363 265 12 0 chr10 135201499 135201582 -10387706 - MER96 DNA MER1_type? -83 92 9 845 181 16 93 chr10 135201849 135202042 -10387246 + AluJo SINE Alu 1 178 -134 396 248 19 0 chr10 135202539 135202644 -10386644 - MIR SINE MIR -57 151 45 671 276 116 55 chr10 135205225 135205606 -10383682 - MLT1E3 LTR MaLR -218 406 3 2671 49 3 0 chr10 135206231 135206579 -10382709 + L1PA4 LINE L1 5577 5925 -230 24569 30 7 1 chr10 135206696 135210458 -10378830 + L1PA4 LINE L1 2390 6155 0 2379 209 50 9 chr10 135210967 135211502 -10377786 - REP3 LTR ERV -5 557 1 727 309 71 11 chr10 135211533 135211883 -10377405 - LTR16A LTR ERVL -17 433 63 2725 226 85 31 chr10 135211940 135213673 -10375615 - L1ME1 LINE L1 -17 6149 4306 580 258 71 87 chr10 135213708 135214276 -10375012 + L2 LINE L2 2694 3263 -50 324 202 124 23 chr10 135214322 135214451 -10374837 + L1ME4a LINE L1 5964 6105 -16 676 229 76 84 chr10 135215102 135215351 -10373937 - MIR SINE MIR 0 262 16 260 289 24 0 chr10 135215413 135215496 -10373792 - L1MC2 LINE L1 -25 6713 6629 2562 183 122 29 chr10 135216408 135217106 -10372182 - L1MC2 LINE L1 -125 6613 5851 2470 233 64 23 chr10 135217114 135217798 -10371490 - L1MC2 LINE L1 -2106 4434 3703 2109 113 20 0 chr10 135217798 135218091 -10371197 - AluSx SINE Alu -13 299 1 2470 233 64 23 chr10 135218091 135218308 -10370980 - L1MC2 LINE L1 -2837 3703 3496 4900 143 16 4 chr10 135218311 135219130 -10370158 + Tigger1 DNA MER2_type 1 829 -1589 38795 35 4 1 chr10 135219130 135224412 -10364876 + L1P2 LINE L1 436 5726 -429 883 274 61 10 chr10 135224622 135224932 -10364356 - L1MC2 LINE L1 -6140 400 75 21 0 0 0 chr10 135225185 135225206 -10364082 + AT_rich Low_complexity Low_complexity 1 21 0 609 256 108 25 chr10 135226476 135226679 -10362609 - MIR SINE MIR -30 232 13 24 0 0 0 chr10 135226695 135226719 -10362569 + AT_rich Low_complexity Low_complexity 1 24 0 270 308 17 0 chr10 135226851 135226968 -10362320 + L1ME LINE L1 5704 5822 -299 405 209 97 45 chr10 135228026 135228160 -10361128 - MER5A DNA MER1_type -22 167 27 594 332 157 6 chr10 135228343 135228888 -10360400 - L2 LINE L2 -76 3237 2591 256 327 39 82 chr10 135229031 135229239 -10360049 - MIR SINE MIR -51 211 13 2080 115 3 11 chr10 135229834 135230120 -10359168 + AluSx SINE Alu 5 288 -24 225 380 55 15 chr10 135230174 135230374 -10358914 + L2 LINE L2 2850 3057 -215 254 246 0 33 chr10 135230454 135230515 -10358773 + L2 LINE L2 3252 3310 -3 21 0 0 0 chr10 135230961 135230982 -10358306 + AT_rich Low_complexity Low_complexity 1 21 0 262 341 61 37 chr10 135231350 135231514 -10357774 - MIR3 SINE MIR -21 187 20 467 241 70 70 chr10 135232038 135232266 -10357022 + L2 LINE L2 3082 3309 -4 874 144 0 0 chr10 135232394 135232526 -10356762 - FLAM_C SINE Alu -1 132 1 292 274 86 34 chr10 135232611 135232728 -10356560 - MIR SINE MIR -68 140 18 314 333 58 23 chr10 135233488 135233659 -10355629 + MIR3 SINE MIR 20 196 -12 2232 112 3 0 chr10 135236117 135236413 -10352875 - AluSx SINE Alu -15 297 1 260 333 65 0 chr10 135236474 135236567 -10352721 + L2 LINE L2 2925 3023 -249 2096 138 181 14 chr10 135236868 135237458 -10351830 + LTR8A LTR ERV1 10 727 0 261 229 71 0 chr10 135237731 135237801 -10351487 - Charlie1 DNA MER1_type -9 2752 2678 1341 268 97 16 chr10 135237820 135238376 -10350912 + L1MCa LINE L1 18 618 -5808 3243 168 17 5 chr10 135238377 135238961 -10350327 - MER50 LTR ERV1 -23 711 121 2073 200 68 24 chr10 135238969 135239733 -10349555 + L1MCa LINE L1 597 1403 -4851 1208 133 51 5 chr10 135239751 135239947 -10349341 + MER30 DNA MER1_type 25 229 -1 1197 170 291 5 chr10 135239950 135240349 -10348939 + L1MCa LINE L1 1420 1932 -4494 2136 253 25 2 chr10 135240349 135240985 -10348303 + L1MCa LINE L1 2726 3376 -3050 3610 138 58 20 chr10 135241012 135241700 -10347588 - Tigger1 DNA MER2_type -906 1512 799 931 43 0 0 chr10 135241714 135241831 -10347457 - L1PA4 LINE L1 -3 6152 6036 3576 139 60 4 chr10 135241957 135242973 -10346315 - L1PBa LINE L1 -3310 3552 2479 3873 221 8 20 chr10 135243106 135244340 -10344948 - L1 LINE L1 -2109 4037 2890 977 176 176 4 chr10 135244452 135244708 -10344580 + Tigger3(Golem) DNA MER2_type 2730 3029 0 573 338 107 19 chr10 135244722 135245310 -10343978 - L2 LINE L2 -71 3242 2590 371 329 43 43 chr10 135245458 135245668 -10343620 - MIR SINE MIR -51 211 2 200 293 71 20 chr10 135245794 135245893 -10343395 + L2 LINE L2 2286 2389 -925 6303 92 41 13 chr10 135246059 135247075 -10342213 - L1PBa LINE L1 -4368 2495 1451 23 0 0 0 chr10 135248088 135248111 -10341177 + AT_rich Low_complexity Low_complexity 1 23 0 1443 172 81 14 chr10 135248325 135248622 -10340666 - MLT1E3 LTR MaLR -300 324 8 2272 115 3 0 chr10 135248634 135248939 -10340349 - AluSq SINE Alu -7 306 1 418 329 13 104 chr10 135249115 135249431 -10339857 - L2 LINE L2 -54 3218 2932 1090 167 23 9 chr10 135249577 135249793 -10339495 + MER20 DNA MER1_type 1 219 0 980 160 39 6 chr10 135250644 135250825 -10338463 + MER20 DNA MER1_type 1 187 -32 577 220 112 82 chr10 135251425 135251657 -10337631 + MIR SINE MIR 8 246 -16 2243 85 3 0 chr10 135252368 135252651 -10336637 + AluSp SINE Alu 1 284 -29 2733 99 37 41 chr10 135252808 135253255 -10336033 - MER51B-int LTR ERV1 -3882 2381 1212 2097 142 58 3 chr10 135253234 135253578 -10335710 - MER51B-int LTR ERV1 -5152 2385 2023 * 10842 132 27 41 chr10 135253579 135255453 -10333835 - MER51B-int LTR ERV1 -5640 2176 329 1144 95 48 0 chr10 135255441 135255609 -10333679 - MER51B-int LTR ERV1 -7640 176 1 * 1799 134 57 85 chr10 135255609 135255997 -10333291 - MER51B LTR ERV1 0 377 1 766 196 14 0 chr10 135255997 135256140 -10333148 + AluJb SINE Alu 163 307 -5 836 182 16 59 chr10 135256195 135256382 -10332906 + AluJo SINE Alu 1 179 -133 309 313 92 15 chr10 135256552 135256683 -10332605 + MIR SINE MIR 116 256 -6 191 301 140 65 chr10 135257054 135257147 -10332141 + L2 LINE L2 3187 3286 -27 * 1052 261 36 16 chr10 135257137 135257390 -10331898 - MIR SINE MIR 0 262 5 419 229 263 15 chr10 135257513 135257718 -10331570 + MIR SINE MIR 1 256 -6 198 208 0 0 chr10 135259095 135259143 -10330145 + (CGG)n Simple_repeat Simple_repeat 2 49 0 1515 175 114 27 chr10 135262250 135262582 -10326706 - MLT1A1 LTR MaLR 0 365 5 798 188 0 36 chr10 135263011 135263149 -10326139 - FLAM_C SINE Alu 0 133 1 302 324 61 7 chr10 135264520 135264668 -10324620 - MIR SINE MIR 0 262 107 1622 178 32 41 chr10 135264686 135264921 -10324367 + MER2 DNA MER2_type 2 235 -110 1669 71 0 14 chr10 135264921 135265132 -10324156 + AluSq SINE Alu 100 307 -6 1622 178 32 41 chr10 135265132 135265234 -10324054 + MER2 DNA MER2_type 235 336 -9 256 91 0 0 chr10 135265351 135265395 -10323893 - Alu SINE Alu -3 305 262 2190 122 0 3 chr10 135265814 135266125 -10323163 + AluSg SINE Alu 1 310 0 1720 168 76 80 chr10 135266788 135267287 -10322001 + Charlie4a DNA MER1_type 12 508 0 2291 118 0 3 chr10 135267538 135267851 -10321437 - AluSx SINE Alu 0 312 1 456 285 133 44 chr10 135267859 135267949 -10321339 + L1ME3A LINE L1 5521 5602 -568 1317 185 125 27 chr10 135267949 135268278 -10321010 + MLT1A1 LTR MaLR 5 365 0 456 285 133 44 chr10 135268278 135268570 -10320718 + L1ME3A LINE L1 5602 5937 -233 2032 165 3 0 chr10 135268722 135269031 -10320257 - AluSx SINE Alu -2 310 1 846 168 0 36 chr10 135269209 135269346 -10319942 - FLAM_C SINE Alu 0 133 2 1695 199 7 0 chr10 135269407 135269713 -10319575 - AluJo SINE Alu -4 308 1 1998 141 31 20 chr10 135269918 135270272 -10319016 + LTR45B LTR ERV1 1 358 -131 2618 109 20 0 chr10 135270426 135270774 -10318514 - THE1A LTR MaLR 0 355 1 328 307 44 7 chr10 135270774 135270911 -10318377 - MER5B DNA MER1_type -18 160 19 694 238 10 99 chr10 135271181 135271483 -10317805 - L1MC4a LINE L1 -1763 6045 5771 272 250 56 0 chr10 135271623 135271695 -10317593 + L1MD2 LINE L1 6073 6148 -211 626 248 24 81 chr10 135271906 135271998 -10317290 - L1MC4a LINE L1 -748 5398 5302 2177 100 0 26 chr10 135271998 135272308 -10316980 - AluSx SINE Alu -2 310 9 626 248 24 81 chr10 135272308 135272593 -10316695 - L1MC4a LINE L1 -844 5302 5165 365 151 0 0 chr10 135272601 135272681 -10316607 - AluJ/FRAM SINE Alu 0 312 233 22 56 0 0 chr10 135272828 135272864 -10316424 + AT_rich Low_complexity Low_complexity 1 36 0 1245 246 67 6 chr10 135273360 135273690 -10315598 + Charlie1 DNA MER1_type 1 350 -2411 299 222 210 10 chr10 135273687 135273929 -10315359 + Charlie1 DNA MER1_type 2426 2759 -2 * 2194 205 156 47 chr10 135273959 135274783 -10314505 - L1MD2 LINE L1 -2 6855 5949 21 0 0 0 chr10 135274986 135275007 -10314281 + AT_rich Low_complexity Low_complexity 1 21 0 1993 124 58 3 chr10 135275382 135275673 -10313615 + AluSx SINE Alu 1 307 -5 2526 221 74 30 chr10 135276241 135276801 -10312487 - L1MD2 LINE L1 -743 5901 5367 1824 175 0 3 chr10 135276801 135277092 -10312196 - AluJb SINE Alu -22 290 1 2526 221 74 30 chr10 135277092 135277280 -10312008 - L1MD2 LINE L1 -1277 5367 5189 2104 119 0 0 chr10 135277280 135277566 -10311722 + AluSx SINE Alu 26 311 -1 2526 221 74 30 chr10 135277566 135277879 -10311409 - L1MD2 LINE L1 -1455 5189 4873 925 152 51 64 chr10 135278036 135278311 -10310977 + MER2 DNA MER2_type 9 345 0 1558 213 51 57 chr10 135278312 135278537 -10310751 - L1MD2 LINE L1 -1808 4836 4611 2354 103 0 3 chr10 135278537 135278847 -10310441 + AluY SINE Alu 1 309 -2 1558 213 51 57 chr10 135278847 135279113 -10310175 - L1MD2 LINE L1 -2033 4611 4348 1434 235 78 18 chr10 135279133 135279636 -10309652 - L1MD2 LINE L1 -3483 3161 2629 * 2296 236 60 11 chr10 135279629 135280294 -10308994 - L1MD2 LINE L1 -4311 2333 1539 2076 121 0 29 chr10 135280664 135280970 -10308318 - AluSg SINE Alu -13 297 1 1758 171 10 3 chr10 135280993 135281286 -10308002 - AluJo SINE Alu -17 295 1 579 163 0 0 chr10 135281467 135281565 -10307723 + MSTD LTR MaLR 5 102 -294 8200 102 117 75 chr10 135281570 135283201 -10306087 - pTR5 LTR ERV1 0 2438 741 253 271 0 14 chr10 135283276 135283346 -10305942 + CT-rich Low_complexity Low_complexity 2 70 0 23 0 0 0 chr10 135283453 135283476 -10305812 + AT_rich Low_complexity Low_complexity 1 23 0 953 196 0 7 chr10 135283481 135283634 -10305654 - FRAM SINE Alu -13 153 2 194 358 28 56 chr10 135283889 135284068 -10305220 - L2 LINE L2 -251 3021 2848 688 203 63 0 chr10 135284575 135284718 -10304570 - MER20 DNA MER1_type -65 154 3 2964 107 48 0 chr10 135285328 135285740 -10303548 - MER57B LTR ERV1 0 434 3 2162 120 3 0 chr10 135286454 135286753 -10302535 - AluSq SINE Alu -11 302 3 1225 117 11 0 chr10 135286753 135286932 -10302356 - LTR9B LTR ERV1 -461 183 3 1891 142 87 35 chr10 135286943 135287310 -10301978 - MER4B LTR ERV1 -224 386 1 2607 108 3 8 chr10 135287744 135288105 -10301183 - THE1B LTR MaLR -5 359 1 757 170 42 12 chr10 135288283 135288448 -10300840 - L1MD1 LINE L1 -8 6234 6065 1709 127 13 34 chr10 135288449 135288818 -10300470 - MER65A LTR ERV1 -20 425 1 1053 220 131 24 chr10 135288818 135289109 -10300179 - L1MD2 LINE L1 -159 6200 5879 337 130 54 65 chr10 135289129 135289221 -10300067 - MER34 LTR ERV1 -3 539 449 1229 163 61 44 chr10 135289586 135289881 -10299407 - L1MD2 LINE L1 -562 5797 5498 316 138 46 15 chr10 135289891 135289956 -10299332 + LTR49 LTR ERV1 9 75 -520 512 104 0 26 chr10 135289956 135290033 -10299255 + AluSc SINE Alu 80 154 -155 862 177 54 14 chr10 135290329 135290476 -10298812 - AluJo SINE Alu -24 288 136 5382 118 35 75 chr10 135290585 135291569 -10297719 - L1MC1 LINE L1 0 6333 5390 1508 141 32 16 chr10 135291569 135291817 -10297471 - AluJo SINE Alu -5 307 56 973 137 48 0 chr10 135291818 135291964 -10297324 - AluJo SINE Alu -159 153 1 6451 210 65 43 chr10 135291965 135292051 -10297237 - L1MC1 LINE L1 -751 5395 5312 581 218 91 0 chr10 135292051 135292161 -10297127 - FLAM_A SINE Alu -13 120 1 6451 210 65 43 chr10 135292161 135293890 -10295398 - L1MC1 LINE L1 -834 5312 3539 843 137 0 0 chr10 135294223 135294347 -10294941 + FLAM_C SINE Alu 1 124 -19 2204 184 53 14 chr10 135294736 135294833 -10294455 + MSTB1 LTR MaLR 4 96 -336 2340 150 96 0 chr10 135294833 135295220 -10294068 - MSTA LTR MaLR -4 424 1 2204 184 53 14 chr10 135295220 135295535 -10293753 + MSTB1 LTR MaLR 96 432 0 322 292 81 19 chr10 135295962 135296123 -10293165 + L2 LINE L2 2369 2539 -775 346 241 67 113 chr10 135296153 135296348 -10292940 - MER46C DNA MER2_type 0 338 153 1243 270 107 35 chr10 135296434 135296997 -10292291 - L1ME3A LINE L1 -242 5928 5326 884 182 12 18 chr10 135296998 135297168 -10292120 - MSTD LTR MaLR -227 169 1 6122 231 85 43 chr10 135297179 135298831 -10290457 - MSTD-int LTR MaLR -13 1722 2 744 176 61 8 chr10 135298861 135298992 -10290296 - FAM SINE Alu -28 157 20 365 100 0 0 chr10 135299028 135299078 -10290210 - MSTD LTR MaLR 0 396 347 2085 94 33 39 chr10 135299079 135299386 -10289902 - AluSg SINE Alu -5 305 1 21 0 0 0 chr10 135299390 135299411 -10289877 + AT_rich Low_complexity Low_complexity 1 21 0 5384 98 34 14 chr10 135299412 135300209 -10289079 - L1PA13 LINE L1 -19 6144 5332 941 160 166 0 chr10 135300209 135300396 -10288892 + MSTA LTR MaLR 1 218 -210 5753 174 27 2 chr10 135300396 135301463 -10287825 - L1PA13 LINE L1 -936 5210 4117 670 214 26 13 chr10 135301461 135301615 -10287673 - L1PA13 LINE L1 -3240 2906 2751 * 1457 108 169 36 chr10 135302073 135302322 -10286966 - AluSg SINE Alu -17 283 2 2313 84 0 10 chr10 135302330 135302629 -10286659 - AluSc SINE Alu -13 296 1 3261 247 66 25 chr10 135303060 135303560 -10285728 + L1ME3A LINE L1 4660 5138 -1032 2363 82 13 3 chr10 135303560 135303864 -10285424 + AluY SINE Alu 1 307 -4 3261 247 66 25 chr10 135303864 135304805 -10284483 + L1ME3A LINE L1 5138 6167 -3 241 347 13 0 chr10 135305050 135305125 -10284163 - L1MEd LINE L1 -5601 518 443 1082 185 31 48 chr10 135305224 135305451 -10283837 + MER58A DNA MER1_type 1 223 -1 674 203 92 12 chr10 135305516 135305679 -10283609 - MER3 DNA MER1_type -16 193 18 871 192 28 39 chr10 135305680 135305862 -10283426 - AluJb SINE Alu -38 274 95 29 28 0 0 chr10 135306000 135306036 -10283252 + AT_rich Low_complexity Low_complexity 1 36 0 1764 188 29 26 chr10 135306901 135307241 -10282047 + MER58B DNA MER1_type 1 341 0 500 231 157 41 chr10 135307275 135307422 -10281866 + MER5A DNA MER1_type 26 189 0 251 238 209 19 chr10 135307667 135307772 -10281516 + MIR3 SINE MIR 36 160 -48 1943 127 3 45 chr10 135308143 135308457 -10280831 - AluSx SINE Alu -11 301 1 207 321 48 24 chr10 135309395 135309479 -10279809 + L2 LINE L2 3151 3236 -36 198 281 130 41 chr10 135312537 135312683 -10276605 - L3 LINE CR1 -1188 389 231 393 201 212 5 chr10 135314527 135314640 -10274648 + MER3 DNA MER1_type 5 140 -69 3190 165 90 35 chr10 135314645 135314786 -10274502 - L1MB8 LINE L1 -8 6170 6038 2233 96 0 0 chr10 135314786 135315079 -10274209 + AluSx SINE Alu 11 303 -9 3190 165 90 35 chr10 135315079 135315868 -10273420 - L1MB8 LINE L1 -140 6038 5154 182 37 37 0 chr10 135315912 135315939 -10273349 + (TA)n Simple_repeat Simple_repeat 2 29 0 278 220 177 71 chr10 135316163 135316304 -10272984 - MER112 DNA MER1_type -58 202 47 510 254 180 32 chr10 135316417 135316634 -10272654 + MIR SINE MIR 8 256 -6 756 271 201 12 chr10 135316789 135317191 -10272097 + L2 LINE L2 2835 3312 -1 537 249 141 0 chr10 135317642 135317819 -10271469 + MER63A DNA MER1_type 1 202 -8 2411 68 0 29 chr10 135318080 135318389 -10270899 - AluY SINE Alu -11 300 1 535 267 217 31 chr10 135318785 135319278 -10270010 - L2 LINE L2 0 3313 2722 757 209 78 42 chr10 135319326 135319517 -10269771 + MIR SINE MIR 20 217 -45 927 179 20 7 chr10 135319604 135319755 -10269533 - FRAM SINE Alu -12 154 2 1338 195 0 0 chr10 135319897 135320128 -10269160 + AluJo SINE Alu 1 231 -81 996 175 63 0 chr10 135320191 135320380 -10268908 - MER3 DNA MER1_type 0 209 9 219 318 228 11 chr10 135320632 135320821 -10268467 + MIR SINE MIR 1 230 -32 181 290 194 0 chr10 135321941 135322003 -10267285 + L2 LINE L2 3197 3270 -2 441 237 112 83 chr10 135323040 135323209 -10266079 + MER69A DNA AcHobo 1 174 -3 324 0 0 0 chr10 135323568 135323604 -10265684 + (CCCCG)n Simple_repeat Simple_repeat 1 36 0 2210 69 26 30 chr10 135324497 135324801 -10264487 - AluY SINE Alu -8 303 1 1873 126 18 3 chr10 135324853 135325138 -10264150 - AluSx SINE Alu -17 295 7 7070 190 35 10 chr10 135325295 135327184 -10262104 - L1PA12 LINE L1 -3452 4132 2181 6623 152 47 25 chr10 135327193 135328362 -10260926 - L1PA12 LINE L1 -5529 2045 1 1361 189 110 10 chr10 135328374 135328675 -10260613 - MSTD LTR MaLR -64 332 2 412 263 127 50 chr10 135328698 135328957 -10260331 - L1ME LINE L1 -5375 695 417 1666 216 55 30 chr10 135328993 135329164 -10260124 - L1MC4a LINE L1 -1604 6204 6039 1440 195 34 34 chr10 135329164 135329461 -10259827 + AluJo SINE Alu 1 297 -15 1666 216 55 30 chr10 135329461 135329854 -10259434 - L1MC4a LINE L1 -1769 6039 5553 1159 228 25 104 chr10 135329920 135330364 -10258924 + LTR40c LTR ERVL 53 461 -4 390 269 46 21 chr10 135330790 135330829 -10258459 + HERVL40 LTR ERVL 1065 1102 -4428 1648 160 77 0 chr10 135330829 135331116 -10258172 - AluJb SINE Alu -3 309 1 390 269 46 21 chr10 135331116 135331296 -10257992 + HERVL40 LTR ERVL 1102 1352 -4178 * 1050 179 49 69 chr10 135331294 135331540 -10257748 - HERVL40 LTR ERVL -333 5197 4957 2071 135 0 0 chr10 135332282 135332578 -10256710 + AluSx SINE Alu 1 296 -16 38 61 0 0 chr10 135333338 135333404 -10255884 + AT_rich Low_complexity Low_complexity 1 66 0 187 337 63 21 chr10 135333465 135333560 -10255728 - L2 LINE L2 -36 3277 3179 26 0 0 0 chr10 135333594 135333620 -10255668 + AT_rich Low_complexity Low_complexity 1 26 0 2412 170 17 68 chr10 135333640 135334122 -10255166 - LTR32 LTR ERVL 0 471 15 723 58 0 0 chr10 135334642 135334729 -10254559 + THE1B LTR MaLR 1 87 -277 36 0 0 0 chr10 135334964 135335000 -10254288 + AT_rich Low_complexity Low_complexity 1 36 0 1077 184 96 23 chr10 135335003 135335221 -10254067 - MER77 LTR ERV1 -371 234 1 281 167 0 0 chr10 135335227 135335269 -10254019 - 5S rRNA rRNA -79 42 1 2003 130 81 26 chr10 135335910 135336255 -10253033 - THE1B LTR MaLR 0 364 1 2368 59 0 0 chr10 135339483 135339773 -10249515 + AluY SINE Alu 1 290 -21 183 341 30 23 chr10 135340164 135340296 -10248992 - MIR3 SINE MIR -12 196 64 22 35 0 0 chr10 135340803 135340832 -10248456 + AT_rich Low_complexity Low_complexity 1 29 0 1125 168 11 5 chr10 135341014 135341204 -10248084 - AluJb SINE Alu -14 298 108 24 0 0 0 chr10 135341282 135341306 -10247982 + AT_rich Low_complexity Low_complexity 1 24 0 825 194 0 15 chr10 135341354 135341488 -10247800 + FLAM_A SINE Alu 1 132 -1 287 340 138 6 chr10 135341752 135341911 -10247377 + MIR3 SINE MIR 28 207 -1 512 276 38 42 chr10 135342058 135342297 -10246991 - L2 LINE L2 0 3313 3076 421 273 97 17 chr10 135342609 135342785 -10246503 - MIR SINE MIR -72 190 1 2152 200 20 92 chr10 135343120 135343710 -10245578 + MER44D DNA MER2_type 2 604 -1 380 248 7 34 chr10 135345061 135345210 -10244078 + L1PB1 LINE L1 4256 4400 -1746 253 218 0 0 chr10 135345204 135345259 -10244029 + L1MC4 LINE L1 6649 6703 -1339 * 231 213 113 0 chr10 135345232 135345312 -10243976 + L1MC4 LINE L1 6615 6703 -1339 * 303 261 23 0 chr10 135345296 135345384 -10243904 - L1MC4 LINE L1 -1339 6703 6614 274 278 0 0 chr10 135345322 135345412 -10243876 + L1MC4 LINE L1 6614 6703 -1339 * 312 91 0 0 chr10 135345412 135345456 -10243832 + (CA)n Simple_repeat Simple_repeat 2 45 0 5984 145 39 12 chr10 135345457 135347153 -10242135 + L1PB1 LINE L1 4415 6147 -4 36 44 0 15 chr10 135347203 135347222 -10242066 + AT_rich Low_complexity Low_complexity 1 19 -48 3154 18 0 3 chr10 135347222 135347563 -10241725 - L1PA3 LINE L1 -3 6152 5813 36 44 0 15 chr10 135347563 135347611 -10241677 + AT_rich Low_complexity Low_complexity 19 67 0 279 284 9 46 chr10 135347765 135347874 -10241414 + MER5A DNA MER1_type 1 105 -84 227 204 57 68 chr10 135347805 135347893 -10241395 - MER5A DNA MER1_type -26 163 77 * 1990 164 58 36 chr10 135347966 135348489 -10240799 + MLT2A2 LTR ERVL 1 554 0 567 249 30 12 chr10 135348505 135348670 -10240618 + MER5A DNA MER1_type 22 189 0 429 326 47 0 chr10 135349558 135349687 -10239601 + MIR3 SINE MIR 5 139 -69 324 362 61 31 chr10 135349755 135349951 -10239337 + L2 LINE L2 2734 2935 -379 1536 186 24 41 chr10 135349952 135350372 -10238916 - L1MDb LINE L1 -5390 1019 468 939 278 168 0 chr10 135350381 135350744 -10238544 - L1MDb LINE L1 -5982 427 4 781 240 94 55 chr10 135354332 135354609 -10234679 + LTR56 LTR ERV1 27 310 -135 2242 114 0 0 chr10 135354609 135354908 -10234380 - AluSx SINE Alu -13 299 1 781 240 94 55 chr10 135354908 135355050 -10234238 + LTR56 LTR ERV1 310 445 0 990 174 37 37 chr10 135355243 135355461 -10233827 + AluJb SINE Alu 85 302 -10 235 290 140 0 chr10 135356049 135356156 -10233132 + MIR SINE MIR 25 146 -116 724 277 104 56 chr10 135356803 135357407 -10231881 + L2 LINE L2 2673 3313 0 2279 148 21 71 chr10 135357664 135358145 -10231143 + LTR32 LTR ERVL 15 471 0 13662 27 6 0 chr10 135358482 135360213 -10229075 - L1PA4 LINE L1 -1665 4481 2740 7633 30 3 2 chr10 135360213 135361884 -10227404 + L1PA4 LINE L1 4481 6152 -3 249 348 56 0 chr10 135362222 135362455 -10226833 + L1ME LINE L1 5506 5751 -370 19986 161 48 20 chr10 135362531 135367421 -10221867 + L1M1 LINE L1 12 5102 -2463 834 56 0 0 chr10 135367421 135367529 -10221759 + (GAAA)n Simple_repeat Simple_repeat 4 111 0 19986 161 48 20 chr10 135367529 135368288 -10221000 + L1M1 LINE L1 5102 5838 -1727 566 272 81 27 chr10 135368409 135368608 -10220680 + MER66A LTR ERV1 195 413 -65 1453 45 0 0 chr10 135368608 135368785 -10220503 - L1PA4 LINE L1 -7 6148 5972 566 272 81 27 chr10 135368785 135368846 -10220442 + MER66A LTR ERV1 413 469 -9 365 186 0 0 chr10 135369004 135369063 -10220225 + Tigger3(Golem) DNA MER2_type 2 60 -2969 590 109 33 0 chr10 135369063 135369155 -10220133 - LTR32 LTR ERVL 0 471 377 2690 121 55 2 chr10 135369534 135369989 -10219299 + L1MC1 LINE L1 5832 6310 -23 739 202 0 8 chr10 135370241 135370370 -10218918 - FLAM_C SINE Alu -5 128 1 1865 136 37 0 chr10 135370458 135370758 -10218530 + AluSx SINE Alu 1 310 0 363 295 13 13 chr10 135371570 135371726 -10217562 - MER41B LTR ERV1 -205 430 275 1887 109 69 7 chr10 135373730 135374006 -10215282 + AluSq SINE Alu 1 293 -20 1195 218 100 9 chr10 135374006 135374327 -10214961 + Charlie1 DNA MER1_type 1 350 -2411 323 196 71 0 chr10 135374378 135374490 -10214798 + Charlie1 DNA MER1_type 2493 2612 -149 3398 215 97 33 chr10 135374587 135376418 -10212870 - L1MD2 LINE L1 -2 6357 4395 2401 239 55 56 chr10 135376478 135377541 -10211747 - L1MD2 LINE L1 -2474 3672 2612 222 280 215 0 chr10 135377967 135378074 -10211214 - L3 LINE CR1 -45 1532 1403 668 264 136 9 chr10 135378731 135378951 -10210337 - MIR SINE MIR -2 260 13 563 253 13 32 chr10 135379657 135379811 -10209477 - L2 LINE L2 0 3313 3163 285 169 22 34 chr10 135379826 135379915 -10209373 + A-rich Low_complexity Low_complexity 3 90 0 3328 138 21 29 chr10 135380474 135381103 -10208185 + L1MB1 LINE L1 5538 6161 -28 29 28 0 0 chr10 135382569 135382605 -10206683 + AT_rich Low_complexity Low_complexity 1 36 0 13151 21 0 0 chr10 135382767 135385071 -10204217 + L1PA3 LINE L1 3851 6155 0 428 326 62 17 chr10 135385074 135385252 -10204036 - MER5A DNA MER1_type -1 188 3 319 296 23 0 chr10 135385521 135385609 -10203679 + L1MC4 LINE L1 6614 6703 -1339 212 184 0 0 chr10 135385609 135385647 -10203641 + (TA)n Simple_repeat Simple_repeat 2 39 0 3669 135 63 14 chr10 135385647 135386344 -10202944 + Tigger3b DNA MER2_type 6 736 -495 1134 112 6 29 chr10 135386344 135386514 -10202774 + AluSx SINE Alu 1 166 -146 2450 94 99 8 chr10 135436554 135436947 -10152341 - L1P4 LINE L1 -486 5682 5254 3128 144 28 37 chr10 135436948 135437602 -10151686 - L1P4 LINE L1 -1689 4457 3810 920 113 0 0 chr10 135439168 135439292 -10149996 + AluSq/x SINE Alu 1 124 -189 296 271 18 54 chr10 135439305 135439471 -10149817 + L1MEd LINE L1 1049 1208 -4911 335 252 0 48 chr10 135439486 135439589 -10149699 + HAL1 LINE L1 1357 1454 -1053 509 189 50 75 chr10 135439593 135439805 -10149483 + MLT2D LTR ERVL 5 162 -252 5331 114 39 4 chr10 135440365 135441209 -10148079 + L1PA7 LINE L1 5262 6135 -19 440 237 0 30 chr10 135441242 135441373 -10147915 - THE1-int LTR MaLR -1083 497 371 228 86 0 0 chr10 135441768 135441803 -10147485 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 1364 58 6 0 chr10 135441806 135441979 -10147309 - L1PA4 LINE L1 -6 6149 5976 42 0 0 0 chr10 135442782 135442824 -10146464 + AT_rich Low_complexity Low_complexity 1 42 0 1318 232 69 0 chr10 135442933 135443222 -10146066 - AluJo SINE Alu 0 312 4 375 253 152 44 chr10 135443425 135443583 -10145705 + MLT1D LTR MaLR 323 497 -8 327 117 83 0 chr10 135443892 135443952 -10145336 - MSTA LTR MaLR 0 428 364 2102 105 20 14 chr10 135443952 135444248 -10145040 + AluSc SINE Alu 1 298 -11 324 102 0 0 chr10 135444248 135444297 -10144991 + (GA)n Simple_repeat Simple_repeat 1 49 0 2362 124 25 3 chr10 135444297 135444659 -10144629 - MSTA LTR MaLR -56 372 3 784 171 5 54 chr10 135444679 135444901 -10144387 - MSTA-int LTR MaLR -16 1635 1425 205 279 35 23 chr10 135445073 135445159 -10144129 + MIR SINE MIR 64 150 -58 1163 120 45 10 chr10 135445227 135445427 -10143861 + THE1C LTR MaLR 169 375 0 301 357 24 0 chr10 135445543 135445669 -10143619 - MIR SINE MIR -84 178 50 34 0 0 0 chr10 135445719 135445753 -10143535 + AT_rich Low_complexity Low_complexity 1 34 0 1726 24 0 0 chr10 135446316 135446523 -10142765 - L1P LINE L1 -1022 5124 4918 253 352 11 0 chr10 135446518 135446609 -10142679 + HAL1 LINE L1 1654 1745 -762 * 837 208 151 53 chr10 135446969 135447306 -10141982 - MLT2C2 LTR ERVL 0 464 95 2234 160 18 0 chr10 135447470 135448145 -10141143 - L1P4 LINE L1 -577 5588 4904 299 176 0 83 chr10 135448154 135448262 -10141026 + L1PA11 LINE L1 6061 6159 -15 1312 95 0 0 chr10 135448671 135448861 -10140427 - L1P LINE L1 -818 5328 5139 * 5144 42 2 3 chr10 135448859 135449499 -10139789 + L1P LINE L1 4503 5141 -1005 444 255 17 23 chr10 135449497 135449701 -10139587 - L1MDa LINE L1 -3569 2971 2769 * 328 127 48 0 chr10 135450167 135450230 -10139058 + L1MA9 LINE L1 6207 6272 -40 21 0 0 0 chr10 135450476 135450497 -10138791 + AT_rich Low_complexity Low_complexity 1 21 0 2284 90 0 3 chr10 135450505 135450806 -10138482 + AluY SINE Alu 1 300 -11 868 285 80 29 chr10 135451038 135451526 -10137762 - L1MB7 LINE L1 -1 6183 5671 1397 260 61 52 chr10 135451661 135452020 -10137268 - L1MB7 LINE L1 -2555 3591 3237 1423 205 42 10 chr10 135452020 135452308 -10136980 + AluJb SINE Alu 1 297 -15 1397 260 61 52 chr10 135452308 135452332 -10136956 - L1MB7 LINE L1 -2909 3237 3215 3042 132 8 10 chr10 135452332 135452824 -10136464 - L1PB3 LINE L1 -3 6151 5661 1397 260 61 52 chr10 135452824 135453209 -10136079 - L1MB7 LINE L1 -2931 3215 2815 264 241 53 30 chr10 135453795 135453928 -10135360 + MER103 DNA DNA 12 147 -19 590 89 0 0 chr10 135453954 135454033 -10135255 - MADE1 DNA Mariner -1 79 1 536 218 201 11 chr10 135455005 135455179 -10134109 + MLT1B LTR MaLR 157 386 -2 22 0 0 0 chr10 135455204 135455226 -10134062 + AT_rich Low_complexity Low_complexity 1 22 0 308 155 60 52 chr10 135456268 135456384 -10132904 - L1MDa LINE L1 -3901 2639 2523 1070 259 98 22 chr10 135456448 135456899 -10132389 - L1MDa LINE L1 -5212 1331 847 794 286 57 20 chr10 135457218 135457519 -10131769 - L1MDa LINE L1 -6196 344 33 3819 214 22 30 chr10 135458045 135459005 -10130283 - L1P LINE L1 -3525 2621 1670 694 264 8 12 chr10 135459005 135459247 -10130041 + L1MC4a LINE L1 4105 4345 -1801 276 330 28 9 chr10 135459518 135459624 -10129664 - MIR3 SINE MIR -26 182 75 23 33 0 0 chr10 135459760 135459790 -10129498 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr10 135459925 135459947 -10129341 + AT_rich Low_complexity Low_complexity 1 22 0 1900 142 40 37 chr10 135460030 135460404 -10128884 + THE1C LTR MaLR 1 375 0 397 352 131 3 chr10 135460416 135460811 -10128477 + L1MC4a LINE L1 5452 5794 -327 1938 118 18 4 chr10 135461046 135461348 -10127940 - AluSp SINE Alu 0 306 1 1278 195 18 57 chr10 135461348 135461682 -10127606 - L1MB8 LINE L1 -63 6115 5795 1690 68 16 36 chr10 135462171 135462421 -10126867 - AluY SINE Alu -28 283 39 476 59 0 0 chr10 135462620 135462688 -10126600 - Alu SINE Alu -3 306 239 2067 134 10 0 chr10 135463212 135463510 -10125778 - AluSx SINE Alu -11 301 1 8173 48 2 28 chr10 135463976 135465167 -10124121 - L1P LINE L1 -2903 3243 2084 305 271 144 8 chr10 135465660 135465684 -10123604 - L1ME3A LINE L1 -267 5903 5884 2281 103 6 0 chr10 135465684 135465995 -10123293 - AluSp SINE Alu 0 313 1 305 271 144 8 chr10 135465995 135466088 -10123200 - L1ME3A LINE L1 -286 5884 5770 570 237 191 13 chr10 135466103 135466354 -10122934 - L1ME3A LINE L1 -421 5700 5398 24 0 0 0 chr10 135466816 135466840 -10122448 + AT_rich Low_complexity Low_complexity 1 24 0 350 186 0 0 chr10 135467109 135467168 -10122120 - L1MCa LINE L1 -6344 82 24 201 167 42 21 chr10 135467900 135467948 -10121340 + L2 LINE L2 3222 3270 -2 210 283 0 0 chr10 135467997 135468050 -10121238 + MIR SINE MIR 102 154 -108 218 271 42 76 chr10 135468296 135468440 -10120848 - L2 LINE L2 -222 3050 2912 664 200 106 12 chr10 135469229 135469399 -10119889 + MIR SINE MIR 63 248 -14 557 166 109 0 chr10 135469435 135469596 -10119692 - L1PBa LINE L1 -4591 2271 2018 3683 211 30 3 chr10 135469732 135471035 -10118253 - L1MCa LINE L1 -3454 3190 1851 751 219 98 0 chr10 135472069 135472284 -10117004 + L1ME1 LINE L1 5928 6163 -3 765 174 70 0 chr10 135472834 135473006 -10116282 - L1MCa LINE L1 -4990 1654 1471 2557 187 33 33 chr10 135473008 135473724 -10115564 - L1MCa LINE L1 -4851 1274 645 611 254 51 11 chr10 135473707 135473884 -10115404 - L1MCa LINE L1 -6353 189 6 * 470 287 49 15 chr10 135474226 135474545 -10114743 - L1MC/D LINE L1 -768 5378 5148 1068 175 17 45 chr10 135474559 135474851 -10114437 + L1MB1 LINE L1 5689 5972 -196 765 164 32 50 chr10 135474853 135475072 -10114216 + AluSx SINE Alu 1 215 -97 204 325 131 0 chr10 135476853 135477013 -10112275 - L2 LINE L2 -170 3143 2963 27 0 0 0 chr10 135478204 135478231 -10111057 + AT_rich Low_complexity Low_complexity 1 27 0 1599 178 70 0 chr10 135478231 135478518 -10110770 - AluSx SINE Alu -1 311 5 274 276 35 11 chr10 135479117 135479204 -10110084 - MIR SINE MIR -102 160 72 258 81 0 0 chr10 135479489 135479526 -10109762 + (CA)n Simple_repeat Simple_repeat 2 38 0 348 264 33 0 chr10 135479925 135480016 -10109272 + MIR3 SINE MIR 113 206 -2 1110 291 12 2 chr10 135481090 135481496 -10107792 - L1 LINE L1 -3156 2990 2581 4342 53 22 0 chr10 135481539 135482090 -10107198 - L1PA5 LINE L1 -1 6153 5591 23 33 0 0 chr10 135482499 135482529 -10106759 + AT_rich Low_complexity Low_complexity 1 30 0 25 31 0 0 chr10 135482699 135482731 -10106557 + AT_rich Low_complexity Low_complexity 1 32 0 259 257 0 40 chr10 135482738 135482812 -10106476 - MIR SINE MIR -67 141 71 1874 124 29 63 chr10 135483093 135483441 -10105847 + MER1B DNA MER1_type 2 337 0 23 33 0 0 chr10 135484759 135484789 -10104499 + AT_rich Low_complexity Low_complexity 1 30 0 379 234 131 21 chr10 135485087 135485232 -10104056 + MLT1E1 LTR MaLR 106 266 -388 547 225 113 6 chr10 135485648 135485808 -10103480 + MER5B DNA MER1_type 2 178 0 422 324 83 20 chr10 135485822 135486026 -10103262 + MIR SINE MIR 43 259 -3 1929 139 10 0 chr10 135486828 135487123 -10102165 - AluSx SINE Alu -14 298 1 227 94 0 0 chr10 135487349 135487381 -10101907 + Alu SINE Alu 3 34 -269 213 309 94 34 chr10 135488505 135488654 -10100634 + MIR3 SINE MIR 2 159 -49 201 261 58 14 chr10 135488736 135488805 -10100483 + MIR3 SINE MIR 86 157 -51 5212 221 71 12 chr10 135489156 135490872 -10098416 + L1M4 LINE L1 2726 4542 -1604 207 0 0 0 chr10 135491054 135491077 -10098211 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 23 0 0 0 chr10 135491872 135491895 -10097393 + AT_rich Low_complexity Low_complexity 1 23 0 393 220 0 0 chr10 135491985 135492076 -10097212 + L1MB2 LINE L1 6007 6097 -74 1020 149 23 0 chr10 135492368 135492543 -10096745 - MLT1C LTR MaLR -5 462 284 537 253 73 6 chr10 135492748 135492926 -10096362 - HERVL40 LTR ERVL -1969 3561 3372 21 57 0 0 chr10 135493502 135493537 -10095751 + AT_rich Low_complexity Low_complexity 1 35 0 599 253 50 9 chr10 135494317 135494538 -10094750 + L1M4 LINE L1 4797 5026 -1120 729 129 9 0 chr10 135494649 135494765 -10094523 - L1PA15 LINE L1 -8 6157 6041 1770 245 89 26 chr10 135494825 135495565 -10093723 - L1M4 LINE L1 -1731 4415 3629 227 303 107 25 chr10 135495605 135495727 -10093561 - LTR67 LTR ERVL -267 290 159 290 161 0 0 chr10 135495912 135495968 -10093320 - Alu SINE Alu 0 302 247 220 154 10 58 chr10 135495968 135496072 -10093216 + T-rich Low_complexity Low_complexity 3 101 0 187 109 0 43 chr10 135496249 135496295 -10092993 + (TTCTCC)n Simple_repeat Simple_repeat 5 48 0 207 327 26 39 chr10 135496546 135496702 -10092586 + C-rich Low_complexity Low_complexity 1 154 0 3344 114 62 35 chr10 135496816 135497483 -10091805 + Tigger3(Golem) DNA MER2_type 2344 3028 -1 238 286 125 9 chr10 135497645 135497757 -10091531 + MIR SINE MIR 117 241 -21 727 285 69 30 chr10 135497796 135498009 -10091279 - L3 LINE CR1 -106 1471 1241 1863 159 64 9 chr10 135498009 135498355 -10090933 + MLT1A1 LTR MaLR 1 365 0 727 285 69 30 chr10 135498355 135498446 -10090842 - L3 LINE CR1 -336 1241 1155 1188 205 138 47 chr10 135499367 135499871 -10089417 - L1MB8 LINE L1 -160 6018 5472 904 252 69 51 chr10 135499869 135500317 -10088971 - L1MEc LINE L1 -5427 969 514 * 243 61 0 0 chr10 135500322 135500355 -10088933 + (TA)n Simple_repeat Simple_repeat 2 34 0 1948 152 3 7 chr10 135500356 135500653 -10088635 - AluSx SINE Alu -16 296 1 1345 171 67 15 chr10 135500698 135500967 -10088321 + AluJo SINE Alu 1 283 -29 1008 112 62 6 chr10 135500970 135501131 -10088157 + THE1B LTR MaLR 195 364 0 12013 87 6 3 chr10 135501131 135502707 -10086581 + THE1B-int LTR MaLR 1 1580 0 2134 146 30 25 chr10 135502707 135503069 -10086219 + THE1B LTR MaLR 1 364 0 2892 124 16 12 chr10 135503094 135503579 -10085709 - Tigger3b DNA MER2_type -686 545 59 321 370 60 40 chr10 135503734 135503923 -10085365 - L2 LINE L2 -338 2976 2792 2367 55 31 0 chr10 135503923 135504213 -10085075 + AluY SINE Alu 1 299 -12 321 370 60 40 chr10 135504213 135504420 -10084868 - L2 LINE L2 -522 2792 2572 629 254 109 60 chr10 135504651 135505164 -10084124 + MLT1H1 LTR MaLR 21 555 0 1725 154 42 0 chr10 135505556 135505868 -10083420 - L1PB4 LINE L1 -3 6153 5829 689 255 42 28 chr10 135507043 135507255 -10082033 - MIR SINE MIR -30 232 18 968 230 20 5 chr10 135507675 135507879 -10081409 + MER20 DNA MER1_type 3 209 -10 310 243 30 118 chr10 135508132 135508301 -10080987 - MIR SINE MIR -30 232 79 584 246 53 60 chr10 135508519 135508804 -10080484 + L2 LINE L2 2468 2750 -564 7287 189 58 38 chr10 135508811 135509702 -10079586 + L1MD2 LINE L1 592 1464 -5076 1302 167 69 83 chr10 135509702 135510050 -10079238 - MER2 DNA MER2_type 0 344 2 7287 189 58 38 chr10 135510050 135511197 -10078091 + L1MD2 LINE L1 1464 2668 -3872 1832 161 28 9 chr10 135511197 135511231 -10078057 - MER2 DNA MER2_type -13 332 300 555 100 0 0 chr10 135511231 135511311 -10077977 + MADE1 DNA Mariner 1 80 0 1832 161 28 9 chr10 135511311 135511600 -10077688 - MER2 DNA MER2_type -45 300 3 2059 204 50 33 chr10 135511601 135512384 -10076904 + L1MD2 LINE L1 2689 6539 -50 315 305 148 0 chr10 135512495 135512623 -10076665 + L2 LINE L2 3126 3272 0 1199 184 289 79 chr10 135512847 135513199 -10076089 + L1MC4 LINE L1 7196 7473 -569 1596 167 4 0 chr10 135513199 135513438 -10075850 + AluJo SINE Alu 49 288 -24 1199 184 289 79 chr10 135513438 135513785 -10075503 + L1MC4 LINE L1 7473 8042 0 325 295 31 8 chr10 135515248 135515377 -10073911 + L1ME4a LINE L1 5793 5924 -197 1502 164 87 28 chr10 135515397 135515684 -10073604 + AluJo SINE Alu 1 304 -8 4797 65 16 0 chr10 135515957 135516583 -10072705 + L1PA13 LINE L1 5525 6160 -3 279 286 0 12 chr10 135517588 135517672 -10071616 - MIR SINE MIR -6 256 174 921 171 17 17 chr10 135517905 135518081 -10071207 - AluJb SINE Alu -14 298 123 1909 117 3 36 chr10 135518081 135518389 -10070899 - AluSx SINE Alu 0 312 15 274 275 66 22 chr10 135518996 135519087 -10070201 - MIR SINE MIR -111 151 57 2120 70 44 0 chr10 135519359 135519671 -10069617 - AluY SINE Alu 0 324 1 395 192 0 30 chr10 135519679 135519778 -10069510 - L1MA3 LINE L1 0 6305 6210 431 299 152 8 chr10 135520231 135520632 -10068656 + L1M4 LINE L1 4770 5228 -918 321 309 42 30 chr10 135520886 135521054 -10068234 + L2 LINE L2 3140 3309 -4 237 65 0 0 chr10 135521844 135521875 -10067413 + (A)n Simple_repeat Simple_repeat 1 31 0 206 261 67 42 chr10 135522407 135522526 -10066762 + L2 LINE L2 2185 2306 -1008 278 279 236 8 chr10 135522526 135522780 -10066508 + L2 LINE L2 2446 2757 -557 1814 158 84 53 chr10 135522799 135523274 -10066014 - MLT1D LTR MaLR 0 505 16 1691 154 22 4 chr10 135524708 135524975 -10064313 - AluSg SINE Alu -38 272 1 2780 63 17 0 chr10 135525789 135526138 -10063150 - THE1A LTR MaLR 0 355 1 2596 71 3 0 chr10 135526138 135526488 -10062800 - THE1A-int LTR MaLR 0 1580 1230 2484 92 0 0 chr10 135526487 135526836 -10062452 - THE1A-int LTR MaLR -1231 349 1 * 2578 86 17 3 chr10 135526836 135527186 -10062102 - THE1A LTR MaLR 0 355 1 306 295 173 14 chr10 135528355 135528494 -10060794 - MIR3 SINE MIR -6 202 42 227 261 102 45 chr10 135529422 135529510 -10059778 - L2 LINE L2 -6 3266 3174 689 265 117 5 chr10 135529635 135529831 -10059457 - MIR SINE MIR -8 254 37 1337 178 37 8 chr10 135530204 135530446 -10058842 + AluJb SINE Alu 64 312 0 334 308 54 0 chr10 135530708 135530838 -10058450 + L1 LINE L1 2235 2371 -3775 2194 79 35 10 chr10 135531233 135531523 -10057765 + AluSx SINE Alu 2 298 -14 28 0 0 0 chr10 135531549 135531577 -10057711 + AT_rich Low_complexity Low_complexity 1 28 0 1870 138 18 11 chr10 135531586 135531898 -10057390 + AluSx SINE Alu 1 314 0 317 306 173 0 chr10 135531956 135532129 -10057159 + L1MC4a LINE L1 5669 5871 -1937 1041 162 0 12 chr10 135532236 135532403 -10056885 + FRAM SINE Alu 1 165 -1 473 197 161 62 chr10 135533037 135533230 -10056058 + MER58C DNA MER1_type 4 215 0 2190 193 19 21 chr10 135533425 135533892 -10055396 + MER44D DNA MER2_type 33 498 -207 2407 90 0 0 chr10 135534271 135534572 -10054716 - AluSg SINE Alu -9 301 1 316 248 132 23 chr10 135534713 135534842 -10054446 + MER5A DNA MER1_type 39 181 -8 936 191 38 23 chr10 135535623 135535885 -10053403 - Zaphod DNA AcHobo -3283 748 483 472 336 48 14 chr10 135536460 135536668 -10052620 + L2 LINE L2 2517 2731 -583 633 247 6 0 chr10 135536904 135537062 -10052226 - MER3 DNA MER1_type -85 124 13 268 267 35 23 chr10 135537963 135538049 -10051239 - MIR SINE MIR -58 150 64 218 400 12 0 chr10 135538029 135538114 -10051174 + MIR SINE MIR 6 91 -171 * 1347 202 70 18 chr10 135538130 135538457 -10050831 - MLT1A1 LTR MaLR -16 349 6 1035 115 0 0 chr10 135539219 135539376 -10049912 + (CA)n Simple_repeat Simple_repeat 2 158 0 384 311 41 0 chr10 135540915 135541037 -10048251 + MIR SINE MIR 11 137 -125 1616 148 7 47 chr10 135541086 135541280 -10048008 - L1PA16 LINE L1 -9 6157 5978 2115 134 28 0 chr10 135541280 135541571 -10047717 - AluSg SINE Alu -11 299 1 1616 148 7 47 chr10 135541571 135541673 -10047615 - L1PA16 LINE L1 -188 5978 5873 230 299 131 0 chr10 135541675 135541782 -10047506 + MIR SINE MIR 124 244 -18 255 125 0 0 chr10 135543114 135543154 -10046134 + (CA)n Simple_repeat Simple_repeat 2 41 0 287 301 19 10 chr10 135544804 135544907 -10044381 + MIR3 SINE MIR 85 188 -20 241 220 40 0 chr10 135545483 135545533 -10043755 + L2 LINE L2 3221 3272 0 310 282 197 8 chr10 135545725 135545842 -10043446 + L2 LINE L2 3134 3272 0 186 233 47 0 chr10 135545916 135545959 -10043329 + L2 LINE L2 3228 3272 0 397 148 61 168 chr10 135546027 135546106 -10043182 - MER53 DNA DNA 0 189 103 2332 118 0 6 chr10 135546106 135546420 -10042868 - AluJb SINE Alu 0 312 1 397 148 61 168 chr10 135546420 135546536 -10042752 - MER53 DNA DNA -86 103 15 298 289 16 47 chr10 135546650 135546778 -10042510 - MLT1J LTR MaLR -181 330 207 362 241 36 30 chr10 135546834 135547000 -10042288 + L1MC5 LINE L1 7633 7799 -162 1923 110 3 28 chr10 135547090 135547372 -10041916 - AluSx SINE Alu 0 312 38 873 220 0 12 chr10 135547395 135547563 -10041725 + FRAM SINE Alu 1 166 0 1867 157 0 0 chr10 135547605 135547937 -10041351 - AluSx SINE Alu 0 332 1 225 250 16 16 chr10 135548048 135548112 -10041176 - MLT1L LTR MaLR -530 85 22 2422 147 7 19 chr10 135548753 135549182 -10040106 + L1MB8 LINE L1 5746 6169 -9 2071 164 3 0 chr10 135549184 135549495 -10039793 - AluSx SINE Alu 0 312 1 1757 183 3 13 chr10 135549524 135549836 -10039452 + AluJb SINE Alu 3 311 -1 471 207 45 9 chr10 135551321 135551432 -10037856 + ORSL DNA AcHobo 4 118 -157 790 181 0 0 chr10 135551439 135551566 -10037722 + FLAM_C SINE Alu 5 131 -2 26 30 0 0 chr10 135551607 135551640 -10037648 + AT_rich Low_complexity Low_complexity 1 33 0 396 144 189 78 chr10 135551643 135551796 -10037492 + ORSL DNA AcHobo 106 275 0 23 33 0 0 chr10 135552324 135552354 -10036934 + AT_rich Low_complexity Low_complexity 1 30 0 315 287 64 45 chr10 135552976 135553133 -10036155 - MIR SINE MIR -43 219 60 215 299 41 91 chr10 135553888 135553987 -10035301 - L2 LINE L2 -214 3058 2972 2354 153 21 0 chr10 135553987 135554367 -10034921 + MLT1B LTR MaLR 1 388 -2 215 299 41 91 chr10 135554367 135554464 -10034824 - L2 LINE L2 -300 2972 2872 1529 206 106 34 chr10 135554929 135555400 -10033888 + MLT1D LTR MaLR 1 505 0 2282 109 0 3 chr10 135556383 135556677 -10032611 + AluSc SINE Alu 1 293 -16 735 173 11 17 chr10 135556788 135556967 -10032321 + (TGAA)n Simple_repeat Simple_repeat 1 178 0 825 190 0 0 chr10 135557004 135557183 -10032105 + (TGAA)n Simple_repeat Simple_repeat 1 179 0 710 207 6 0 chr10 135557144 135557323 -10031965 + (TGAG)n Simple_repeat Simple_repeat 1 180 0 * 493 281 94 23 chr10 135558345 135558516 -10030772 + MIR SINE MIR 34 216 -46 189 0 0 0 chr10 135558971 135558992 -10030296 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 216 314 118 0 chr10 135560088 135560190 -10029098 + MIR SINE MIR 139 252 -10 * 311 322 27 38 chr10 135560153 135560336 -10028952 - MIR SINE MIR -12 250 70 613 249 159 5 chr10 135560511 135560700 -10028588 + L3 LINE CR1 1354 1571 -6 380 224 248 0 chr10 135560804 135560929 -10028359 - MER3 DNA MER1_type -53 156 1 985 276 134 11 chr10 135562311 135562662 -10026626 + L3 LINE CR1 1183 1576 -1 187 371 0 0 chr10 135564534 135564623 -10024665 - L3 LINE CR1 -110 1467 1379 249 301 106 18 chr10 135564851 135564964 -10024324 - MIR SINE MIR -69 139 17 358 235 0 17 chr10 135565018 135565133 -10024155 + CT-rich Low_complexity Low_complexity 1 113 0 238 255 0 0 chr10 135565797 135565848 -10023440 + MER5A DNA MER1_type 76 126 -63 417 299 25 38 chr10 135566080 135566237 -10023051 - MIR3 SINE MIR -14 194 40 1750 196 0 16 chr10 135566321 135566458 -10022830 + AluJb SINE Alu 1 139 -173 2453 80 0 3 chr10 135566458 135566757 -10022531 + AluSq SINE Alu 1 298 -15 1750 196 0 16 chr10 135566757 135566936 -10022352 + AluJb SINE Alu 139 312 0 1842 224 52 7 chr10 135568623 135569065 -10020223 + MLT1C LTR MaLR 6 467 0 578 246 34 36 chr10 135569281 135569474 -10019814 - MIR SINE MIR -11 251 62 2284 103 0 22 chr10 135569949 135570269 -10019019 + AluSq SINE Alu 1 313 0 2735 32 3 0 chr10 135570313 135570623 -10018665 + AluY SINE Alu 1 311 0 354 203 0 13 chr10 135570837 135570916 -10018372 + MLT1K LTR MaLR 165 242 -346 220 209 0 0 chr10 135573111 135573154 -10016134 + (TTCA)n Simple_repeat Simple_repeat 2 44 0 552 229 68 57 chr10 135573154 135573346 -10015942 - L2 LINE L2 0 3313 3120 246 174 302 0 chr10 135573647 135573733 -10015555 - MER81 DNA DNA -1 113 2 1963 133 22 35 chr10 135573854 135574170 -10015118 - AluSx SINE Alu 0 312 1 412 282 175 15 chr10 135574231 135574437 -10014851 + MIR SINE MIR 24 262 0 387 208 128 101 chr10 135575137 135575286 -10014002 - MER5A DNA MER1_type -3 186 23 243 219 211 65 chr10 135575525 135575648 -10013640 - MIR3 SINE MIR -59 149 9 401 224 68 73 chr10 135576062 135576161 -10013127 - MIR SINE MIR -58 150 90 1961 232 44 4 chr10 135576161 135576316 -10012972 + MLT1D LTR MaLR 5 152 -353 2511 65 0 7 chr10 135576316 135576624 -10012664 - AluY SINE Alu -5 306 1 1961 232 44 4 chr10 135576624 135576946 -10012342 + MLT1D LTR MaLR 152 501 -4 401 224 68 73 chr10 135576946 135577021 -10012267 - MIR SINE MIR -118 90 16 738 183 32 0 chr10 135578312 135578438 -10010850 - FLAM_C SINE Alu -3 130 1 2016 115 92 11 chr10 135578520 135578867 -10010421 + THE1C LTR MaLR 1 375 0 385 304 250 0 chr10 135578941 135579109 -10010179 - MIR SINE MIR -3 259 50 2041 125 0 4 chr10 135579175 135579456 -10009832 - AluSx SINE Alu -20 292 13 430 279 20 34 chr10 135581210 135581357 -10007931 - MIR SINE MIR -67 195 51 2306 202 45 23 chr10 135581515 135581562 -10007726 + L1ME2 LINE L1 5566 5610 -724 1935 118 129 0 chr10 135581562 135581894 -10007394 + THE1C LTR MaLR 1 375 0 2306 202 45 23 chr10 135581894 135582441 -10006847 + L1ME2 LINE L1 5610 6331 -3 560 253 61 35 chr10 135582642 135582840 -10006448 - MLT1J LTR MaLR -308 203 1 187 208 0 111 chr10 135583208 135583280 -10006008 - MIR SINE MIR -29 233 170 254 257 54 0 chr10 135583403 135583477 -10005811 + LTR67 LTR ERVL 115 192 -365 1841 124 11 8 chr10 135584162 135584429 -10004859 + AluJb SINE Alu 24 291 -21 2455 89 3 0 chr10 135584617 135584920 -10004368 + AluSq SINE Alu 1 304 -9 462 287 101 65 chr10 135585153 135585306 -10003982 - L1ME4a LINE L1 -1 6120 5974 396 0 0 0 chr10 135585306 135585350 -10003938 + (CA)n Simple_repeat Simple_repeat 2 45 0 462 287 101 65 chr10 135585350 135585886 -10003402 - L1ME4a LINE L1 -147 5974 5406 1630 186 82 0 chr10 135585987 135586267 -10003021 - AluJo SINE Alu -9 303 1 261 183 0 0 chr10 135586278 135586338 -10002950 + (TA)n Simple_repeat Simple_repeat 2 61 0 2068 126 3 3 chr10 135586339 135586625 -10002663 - AluSq SINE Alu -27 286 1 281 206 216 20 chr10 135587148 135587250 -10002038 + MIR SINE MIR 20 141 -67 2715 43 0 0 chr10 135587359 135587659 -10001629 - AluY SINE Alu -11 300 1 452 304 109 32 chr10 135589897 135590210 -9999078 + LTR16C LTR ERVL 155 491 0 213 170 19 19 chr10 135590210 135590263 -9999025 + MIR SINE MIR 69 121 -141 526 289 44 17 chr10 135590277 135590457 -9998831 - MIR SINE MIR -2 260 76 1501 191 70 18 chr10 135590461 135590802 -9998486 + MLT1A1 LTR MaLR 7 365 0 281 222 32 0 chr10 135590802 135590865 -9998423 - MIR SINE MIR -181 81 17 1563 162 15 15 chr10 135591271 135591542 -9997746 + AluJo SINE Alu 42 312 0 1188 97 179 0 chr10 135591804 135591999 -9997289 + MER30 DNA MER1_type 1 230 0 281 341 43 14 chr10 135593014 135593152 -9996136 + L2 LINE L2 3160 3301 -12 415 223 58 58 chr10 135593543 135593682 -9995606 - MLT1H LTR MaLR 0 549 411 4586 143 19 26 chr10 135594279 135594486 -9994802 - L1MB1 LINE L1 -1 6167 5960 2298 108 0 13 chr10 135594486 135594801 -9994487 - AluSx SINE Alu -1 311 1 4586 143 19 26 chr10 135594801 135595436 -9993852 - L1MB1 LINE L1 -208 5960 5331 216 387 42 18 chr10 135595481 135595863 -9993425 + L2 LINE L2 2459 2849 -465 203 376 103 0 chr10 135596082 135596199 -9993089 + L2 LINE L2 3136 3264 -8 216 247 144 68 chr10 135596589 135596735 -9992553 - MIR3 SINE MIR -2 206 50 1521 219 11 24 chr10 135596761 135597131 -9992157 + MLT1A1 LTR MaLR 1 365 0 456 353 72 10 chr10 135597183 135597390 -9991898 - MIR SINE MIR -12 250 31 1268 233 70 68 chr10 135597932 135598253 -9991035 + L1ME3A LINE L1 5601 5925 -245 1903 163 0 26 chr10 135598253 135598559 -9990729 + AluSx SINE Alu 1 298 -14 1268 233 70 68 chr10 135598559 135598734 -9990554 + L1ME3A LINE L1 5925 6098 -72 1149 240 71 27 chr10 135598952 135599448 -9989840 - MLT1E LTR MaLR -2 591 24 398 139 42 0 chr10 135599452 135599524 -9989764 + MLT1C LTR MaLR 9 83 -384 760 230 5 52 chr10 135599531 135599722 -9989566 + MLT1C LTR MaLR 286 467 0 293 282 75 121 chr10 135599966 135600313 -9988975 + L2 LINE L2 2940 3270 -2 1669 201 85 14 chr10 135600859 135601272 -9988016 - L1MB8 LINE L1 0 6178 5737 181 167 28 0 chr10 135601310 135601346 -9987942 + L2 LINE L2 2703 2739 -575 661 248 91 34 chr10 135601353 135601651 -9987637 + L1ME2 LINE L1 5838 6152 -12 738 171 0 16 chr10 135601744 135601867 -9987421 - FLAM_C SINE Alu -17 126 6 299 226 0 0 chr10 135602213 135602275 -9987013 + MIR SINE MIR 118 179 -83 251 120 0 20 chr10 135603312 135603362 -9985926 + (TTCA)n Simple_repeat Simple_repeat 1 49 0 201 167 24 0 chr10 135606236 135606278 -9983010 + G-rich Low_complexity Low_complexity 5 47 0 225 94 0 0 chr10 135606890 135606922 -9982366 + (CCG)n Simple_repeat Simple_repeat 3 34 0 21 36 0 0 chr10 135607145 135607173 -9982115 + GC_rich Low_complexity Low_complexity 1 28 0 21 71 0 0 chr10 135608257 135608299 -9980989 + GC_rich Low_complexity Low_complexity 1 42 0 2494 73 0 13 chr10 135608793 135609107 -9980181 - AluSg SINE Alu 0 310 1 21 36 0 0 chr10 135609477 135609505 -9979783 + AT_rich Low_complexity Low_complexity 1 28 0 281 233 82 0 chr10 135615923 135615996 -9973292 + L2 LINE L2 3191 3269 -3 324 299 140 13 chr10 135617637 135617794 -9971494 - MIR SINE MIR -6 256 80 229 333 38 19 chr10 135618039 135618144 -9971144 - MIR SINE MIR -64 144 38 26 0 0 0 chr10 135620783 135620809 -9968479 + GC_rich Low_complexity Low_complexity 1 26 0 26 50 0 0 chr10 135621288 135621328 -9967960 + AT_rich Low_complexity Low_complexity 1 40 0 387 0 0 0 chr10 135623209 135623252 -9966036 + (CA)n Simple_repeat Simple_repeat 2 44 0 252 308 83 23 chr10 135624254 135624387 -9964901 + L2 LINE L2 3126 3266 -6 1912 130 11 4 chr10 135627396 135627673 -9961615 - AluSg SINE Alu -2 308 30 253 263 145 0 chr10 135627703 135627779 -9961509 + L2 LINE L2 3186 3272 0 332 338 59 22 chr10 135627976 135628112 -9961176 - L2 LINE L2 0 3272 3132 200 304 80 45 chr10 135631349 135631461 -9957827 - MIR SINE MIR -57 205 90 24 0 0 0 chr10 135634586 135634610 -9954678 + AT_rich Low_complexity Low_complexity 1 24 0 365 273 91 37 chr10 135636968 135637210 -9952078 + MER112 DNA MER1_type 2 256 0 285 221 96 19 chr10 135637665 135637769 -9951519 - MER103 DNA DNA -44 122 11 633 138 89 0 chr10 135638428 135638551 -9950737 - L1MA9 LINE L1 0 6312 6179 842 86 0 43 chr10 135638622 135638761 -9950527 - FLAM_C SINE Alu 0 133 1 525 164 109 0 chr10 135638766 135638876 -9950412 - L1MA9 LINE L1 -145 6167 6046 1224 139 101 0 chr10 135639106 135639203 -9950085 - MER30 DNA MER1_type 0 230 144 2227 97 3 13 chr10 135639203 135639511 -9949777 - AluSx SINE Alu -7 305 1 1224 139 101 0 chr10 135639511 135639622 -9949666 - MER30 DNA MER1_type -86 144 1 186 186 47 0 chr10 135640033 135640076 -9949212 - L2 LINE L2 -22 3250 3206 1237 170 5 19 chr10 135640520 135640732 -9948556 + AluJb SINE Alu 87 295 -17 287 212 202 0 chr10 135640732 135640831 -9948457 + MIR SINE MIR 110 228 -34 198 0 0 0 chr10 135642098 135642120 -9947168 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2407 82 10 0 chr10 135643659 135643962 -9945326 - AluY SINE Alu -5 306 1 869 198 64 32 chr10 135646127 135646625 -9942663 + MLT2E LTR ERVL 3 628 0 326 171 14 0 chr10 135647144 135647214 -9942074 + (TCCA)n Simple_repeat Simple_repeat 3 73 0 472 346 28 0 chr10 135647248 135647459 -9941829 + MIR SINE MIR 6 222 -40 7244 52 8 2 chr10 135648571 135649589 -9939699 + L1PA7 LINE L1 5128 6153 -1 591 286 103 5 chr10 135649997 135650200 -9939088 + MIR SINE MIR 37 259 -3 182 143 20 0 chr10 135650229 135650278 -9939010 + (TA)n Simple_repeat Simple_repeat 1 50 0 23 33 0 0 chr10 135650439 135650469 -9938819 + AT_rich Low_complexity Low_complexity 1 30 0 4475 130 29 10 chr10 135650732 135651461 -9937827 + L1MB3 LINE L1 5431 6173 -10 2346 102 0 0 chr10 135651727 135652031 -9937257 - AluSx SINE Alu -8 304 1 2631 71 0 0 chr10 135652082 135652393 -9936895 - AluY SINE Alu 0 311 1 586 267 67 99 chr10 135652393 135652515 -9936773 - L1MEd LINE L1 -3060 3069 2945 1691 176 0 46 chr10 135652515 135652839 -9936449 - AluJo SINE Alu -3 309 1 586 267 67 99 chr10 135652839 135653586 -9935702 - L1MEd LINE L1 -3184 2945 2234 2345 107 0 0 chr10 135653586 135653886 -9935402 - AluSx SINE Alu -12 300 1 586 267 67 99 chr10 135653886 135654019 -9935269 - L1MEd LINE L1 -3895 2234 2098 201 74 0 0 chr10 135654388 135654415 -9934873 + (TATG)n Simple_repeat Simple_repeat 2 28 0 418 241 98 32 chr10 135654444 135654707 -9934581 - L1MEd LINE L1 -856 1634 1433 260 163 0 20 chr10 135654707 135654756 -9934532 - MLT2D LTR ERVL 0 464 417 180 231 0 0 chr10 135654766 135654818 -9934470 + (CATATA)n Simple_repeat Simple_repeat 2 53 0 1354 201 51 18 chr10 135654818 135655219 -9934069 - MLT2D LTR ERVL -40 424 5 432 250 48 95 chr10 135655223 135655688 -9933600 - L1MEd LINE L1 -1053 1437 887 2167 109 3 56 chr10 135655688 135656010 -9933278 - AluSp SINE Alu -8 305 1 432 250 48 95 chr10 135656010 135656070 -9933218 - L1MEd LINE L1 -1603 887 826 800 163 47 0 chr10 135656176 135656305 -9932983 - FRAM SINE Alu -20 156 22 276 149 0 0 chr10 135658965 135659012 -9930276 + (T)n Simple_repeat Simple_repeat 1 47 0 346 280 47 47 chr10 135659614 135659764 -9929524 + MIR3 SINE MIR 19 168 -40 478 249 162 6 chr10 135660814 135660987 -9928301 + MIR SINE MIR 33 232 -30 208 188 0 42 chr10 135661216 135661264 -9928024 - L2 LINE L2 0 3313 3268 243 307 68 43 chr10 135661881 135662044 -9927244 - MER5A DNA MER1_type -4 185 19 1490 204 140 25 chr10 135662131 135662538 -9926750 + MLT1C LTR MaLR 6 459 -8 194 352 11 0 chr10 135662924 135663012 -9926276 + MIR SINE MIR 52 140 -68 249 296 113 25 chr10 135664085 135664244 -9925044 - MIR SINE MIR -62 200 28 567 208 156 0 chr10 135664607 135664761 -9924527 + MER45A DNA AcHobo 1 178 0 247 246 15 15 chr10 135664767 135664832 -9924456 + MIR SINE MIR 82 146 -62 365 298 81 0 chr10 135665293 135665454 -9923834 + MIR SINE MIR 74 247 -15 1658 199 21 0 chr10 135665527 135665814 -9923474 - AluJb SINE Alu -19 293 1 219 167 0 0 chr10 135666306 135666348 -9922940 + T-rich Low_complexity Low_complexity 1 42 0 3613 161 28 14 chr10 135666348 135667000 -9922288 - L1MB4 LINE L1 -34 6146 5486 2284 105 0 0 chr10 135667991 135668285 -9921003 + AluSx SINE Alu 1 294 -18 184 250 0 0 chr10 135668415 135668463 -9920825 - MIR SINE MIR -14 248 201 351 241 52 26 chr10 135668505 135668621 -9920667 + MIR SINE MIR 31 149 -113 302 257 104 56 chr10 135669110 135669254 -9920034 - L2 LINE L2 0 3313 3163 2414 192 9 2 chr10 135670770 135671198 -9918090 - MLT1F LTR MaLR -110 432 2 2891 142 59 16 chr10 135671331 135671824 -9917464 + MLT2B2 LTR ERVL 1 514 -1 1041 150 120 4 chr10 135671847 135672081 -9917207 + Charlie5 DNA MER1_type 2325 2585 -27 238 276 152 9 chr10 135672241 135672346 -9916942 + MIR SINE MIR 25 144 -118 1143 190 0 55 chr10 135672588 135672825 -9916463 - AluJo SINE Alu -88 224 1 258 216 0 0 chr10 135674242 135674293 -9914995 + MIR SINE MIR 81 131 -77 1295 180 0 0 chr10 135674315 135674526 -9914762 - AluJb SINE Alu -16 296 86 1558 270 102 21 chr10 135676810 135677704 -9911584 - L1MB4 LINE L1 -765 5381 4511 493 258 176 6 chr10 135879698 135879880 -9709408 + L2 LINE L2 3068 3280 -33 424 262 77 42 chr10 135880424 135880592 -9708696 - L2 LINE L2 -218 3054 2881 637 178 20 34 chr10 135882540 135882686 -9706602 + MER103 DNA DNA 22 165 -1 211 152 22 22 chr10 135883791 135883837 -9705451 + (CAA)n Simple_repeat Simple_repeat 3 48 0 366 315 79 44 chr10 135883884 135884087 -9705201 + MIR SINE MIR 20 229 -33 206 298 71 48 chr10 135884279 135884363 -9704925 - L2 LINE L2 -1 3271 3186 2011 124 13 0 chr10 135885280 135885586 -9703702 + AluSx SINE Alu 1 310 -2 410 286 0 8 chr10 135887058 135887177 -9702111 - MIR SINE MIR -14 248 131 509 240 60 0 chr10 135887177 135887327 -9701961 + L1ME3A LINE L1 6011 6169 -1 770 230 286 15 chr10 135887371 135887762 -9701526 + MLT1D LTR MaLR 8 504 -1 185 299 104 0 chr10 135887954 135888021 -9701267 - L2 LINE L2 -611 2703 2630 3000 182 70 27 chr10 135888178 135889078 -9700210 - L1ME2 LINE L1 0 6170 5174 1956 140 13 0 chr10 135889078 135889378 -9699910 - AluSx SINE Alu -7 305 2 3000 182 70 27 chr10 135889378 135889617 -9699671 - L1ME2 LINE L1 -996 5174 4947 371 319 44 99 chr10 135889685 135890049 -9699239 - L2 LINE L2 -1 3271 2928 185 286 65 13 chr10 135890076 135890153 -9699135 - L2 LINE L2 -497 2817 2737 211 205 0 0 chr10 135890157 135890196 -9699092 + (TG)n Simple_repeat Simple_repeat 1 39 0 216 374 21 79 chr10 135890425 135890615 -9698673 - MIR SINE MIR -56 206 28 549 302 28 44 chr10 135890863 135891115 -9698173 + MIR SINE MIR 14 261 -1 308 302 52 52 chr10 135891361 135891533 -9697755 - MIR SINE MIR -50 212 41 518 301 45 40 chr10 135891607 135891806 -9697482 - MIR SINE MIR -6 256 57 28 0 0 0 chr10 135893569 135893597 -9695691 + AT_rich Low_complexity Low_complexity 1 28 0 745 149 9 0 chr10 135893601 135893715 -9695573 - FLAM_A SINE Alu -18 124 10 355 279 45 58 chr10 135894071 135894225 -9695063 - MLT2E LTR ERVL -443 185 34 327 268 111 42 chr10 135894558 135894748 -9694540 + L2 LINE L2 3106 3308 -5 353 271 19 19 chr10 135899235 135899342 -9689946 + L2 LINE L2 2890 2996 -276 2691 124 44 5 chr10 135899525 135899937 -9689351 - MSTA LTR MaLR 0 428 1 475 304 84 63 chr10 135899988 135900320 -9688968 - L2 LINE L2 -1 3271 2933 1527 216 49 75 chr10 135900364 135900832 -9688456 + MLT1C LTR MaLR 4 459 -8 251 245 94 53 chr10 135901385 135901524 -9687764 - MIR3 SINE MIR -70 138 14 394 216 167 0 chr10 135902069 135902171 -9687117 + MIR3 SINE MIR 47 165 -43 824 259 52 44 chr10 135902704 135903129 -9686159 - MLT1H LTR MaLR -16 533 41 256 253 117 39 chr10 135903171 135903734 -9685554 - L1MC4 LINE L1 -1280 6528 5948 345 222 222 26 chr10 135903837 135903954 -9685334 - L1MC4 LINE L1 -2148 5660 5521 623 162 0 9 chr10 135904154 135904259 -9685029 - MLT1C LTR MaLR -2 465 362 2280 130 25 19 chr10 135904262 135904624 -9684664 + THE1B LTR MaLR 1 364 0 12024 91 5 2 chr10 135904624 135906200 -9683088 + THE1B-int LTR MaLR 1 1580 0 602 170 78 28 chr10 135906205 135906346 -9682942 + THE1B LTR MaLR 7 154 -210 323 268 71 110 chr10 135906472 135906782 -9682506 - L1MCa LINE L1 -4127 2299 2002 21 82 0 0 chr10 135906798 135906847 -9682441 + AT_rich Low_complexity Low_complexity 1 49 0 232 166 69 7 chr10 135906860 135907005 -9682283 + (TA)n Simple_repeat Simple_repeat 2 155 0 300 261 120 21 chr10 135907054 135907196 -9682092 - MIR SINE MIR -4 258 103 457 180 93 119 chr10 135907777 135907971 -9681317 - MER53 DNA DNA 0 189 1 470 145 113 65 chr10 135908389 135908513 -9680775 - L1ME4a LINE L1 -27 6094 5965 272 254 30 0 chr10 135909524 135909591 -9679697 - MIR SINE MIR 0 262 194 278 325 30 26 chr10 135909944 135910093 -9679195 + MIR SINE MIR 4 157 -62 636 229 38 25 chr10 135910131 135910288 -9679000 - MIR SINE MIR -27 235 77 21 57 0 0 chr10 135912343 135912378 -9676910 + AT_rich Low_complexity Low_complexity 1 35 0 192 77 0 0 chr10 135913412 135913438 -9675850 + (CAAG)n Simple_repeat Simple_repeat 2 27 0 249 33 0 0 chr10 135914883 135914913 -9674375 + (TG)n Simple_repeat Simple_repeat 2 31 0 197 289 0 0 chr10 135914937 135914975 -9674313 + MER5A DNA MER1_type 50 87 -102 192 152 0 0 chr10 135915573 135915606 -9673682 + (CAT)n Simple_repeat Simple_repeat 3 35 0 337 203 58 0 chr10 135915727 135915796 -9673492 - MIR SINE MIR -109 153 81 188 289 0 0 chr10 135916525 135916570 -9672718 + L2 LINE L2 3262 3306 -7 186 238 24 0 chr10 135917161 135917203 -9672085 + MIR SINE MIR 110 152 -110 189 268 54 0 chr10 135917238 135917294 -9671994 + MIR SINE MIR 110 168 -94 407 324 81 5 chr10 135917545 135917730 -9671558 + MIR3 SINE MIR 5 203 -5 210 201 70 0 chr10 135917809 135917852 -9671436 - MIR SINE MIR -62 146 104 446 274 131 7 chr10 135919014 135919167 -9670121 + MIR SINE MIR 30 201 -61 667 248 34 0 chr10 135919249 135919398 -9669890 - MER58B DNA MER1_type 0 341 188 180 364 20 20 chr10 135919420 135919519 -9669769 + MIR SINE MIR 15 113 -149 789 191 18 6 chr10 135920145 135920313 -9668975 - L1PB4 LINE L1 -202 5954 5785 216 0 0 0 chr10 135920317 135920341 -9668947 + (CA)n Simple_repeat Simple_repeat 2 25 0 236 152 0 0 chr10 135920365 135920411 -9668877 - LTR66 LTR ERVL -171 439 394 3548 152 9 3 chr10 135920426 135921441 -9667847 - L1PB4 LINE L1 -378 5778 4757 913 202 20 0 chr10 135921762 135921965 -9667323 + L1MC3 LINE L1 6860 7066 -719 2727 164 12 12 chr10 135921967 135922455 -9666833 + L1MC3 LINE L1 7142 7629 -156 248 294 24 12 chr10 135922464 135922549 -9666739 - MIR SINE MIR -1 261 176 451 301 91 65 chr10 135922678 135923050 -9666238 + MLT1J LTR MaLR 29 410 -101 358 333 9 0 chr10 135923281 135923395 -9665893 + MIR SINE MIR 29 143 -119 542 145 0 0 chr10 135923828 135923911 -9665377 + L1MC3 LINE L1 7445 7527 -258 268 362 60 52 chr10 135924065 135924267 -9665021 - L2 LINE L2 -1193 2121 1913 3175 196 46 6 chr10 135924267 135924895 -9664393 - MER82 DNA MER2_type 0 653 1 268 362 60 52 chr10 135924895 135925059 -9664229 - L2 LINE L2 -1401 1913 1752 372 176 55 22 chr10 135925366 135925457 -9663831 - MER53 DNA DNA -2 187 94 495 328 34 29 chr10 135925721 135925925 -9663363 + MIR3 SINE MIR 1 205 -3 280 342 53 0 chr10 135926541 135926655 -9662633 - MIR SINE MIR -115 147 28 578 289 48 26 chr10 135927774 135928002 -9661286 - MIR SINE MIR -27 235 3 28 0 0 0 chr10 135928124 135928152 -9661136 + AT_rich Low_complexity Low_complexity 1 28 0 271 326 129 27 chr10 135928834 135929058 -9660230 + L3 LINE CR1 1092 1338 -239 204 294 0 0 chr10 135929054 135929105 -9660183 + L3b LINE CR1 1530 1580 -3 * 2262 93 3 0 chr10 135929873 135930174 -9659114 + AluSp SINE Alu 1 302 -11 25 75 0 0 chr10 135930633 135930686 -9658602 + AT_rich Low_complexity Low_complexity 1 53 0 3419 218 83 8 chr10 135930718 135931561 -9657727 + L1ME1 LINE L1 5259 6164 -2 274 316 75 34 chr10 135931882 135932065 -9657223 - MIR SINE MIR -9 253 64 2175 107 0 25 chr10 135932422 135932739 -9656549 + AluSx SINE Alu 1 309 -3 3525 118 9 4 chr10 135932977 135933502 -9655786 - L1PA15 LINE L1 -8 6157 5630 2591 215 20 2 chr10 135933502 135934093 -9655195 + L1P LINE L1 2862 3463 -2683 2739 88 3 0 chr10 135934093 135934447 -9654841 - THE1A LTR MaLR 0 355 1 11813 89 8 2 chr10 135934455 135936002 -9653286 - THE1A-int LTR MaLR -24 1556 1 2824 74 3 0 chr10 135936002 135936352 -9652936 - THE1A LTR MaLR 0 355 5 1233 186 4 8 chr10 135936355 135936597 -9652691 + L1P LINE L1 3458 3698 -2448 537 219 24 89 chr10 135936864 135937033 -9652255 - MER113 DNA MER1_type? -91 430 273 882 104 0 15 chr10 135937186 135937321 -9651967 + AluSg/x SINE Alu 180 312 0 377 253 172 40 chr10 135937483 135937681 -9651607 - L1ME4a LINE L1 -1 6120 5897 418 332 75 58 chr10 135937767 135937993 -9651295 - L1ME4a LINE L1 -2169 5639 5410 6243 23 0 1 chr10 135937997 135938705 -9650583 - L1PA3 LINE L1 -3 6152 5446 2021 37 0 8 chr10 135939164 135939410 -9649878 - L1PA5 LINE L1 -3 6151 5908 216 341 77 43 chr10 135939454 135939662 -9649626 + MIR SINE MIR 34 248 -14 2180 96 3 0 chr10 135940103 135940396 -9648892 - AluSc SINE Alu -15 294 1 193 364 0 0 chr10 135941033 135941099 -9648189 - L2 LINE L2 -6 3266 3201 681 273 77 18 chr10 135941347 135941567 -9647721 + MIR SINE MIR 4 236 -26 399 300 20 0 chr10 135941653 135941753 -9647535 + MIR3 SINE MIR 96 197 -11 244 217 0 72 chr10 135941824 135941893 -9647395 + L2 LINE L2 3250 3313 0 1130 239 61 15 chr10 135944429 135944755 -9644533 - MER58B DNA MER1_type 0 341 1 450 303 71 47 chr10 135944766 135944977 -9644311 + MIR SINE MIR 15 230 -32 254 281 0 0 chr10 135945024 135945081 -9644207 + MIR SINE MIR 65 121 -87 221 263 200 44 chr10 135945388 135945548 -9643740 - MIR SINE MIR -46 216 32 323 213 128 0 chr10 135945549 135945643 -9643645 + MER113 DNA MER1_type? 9 114 -407 * 346 39 19 19 chr10 135945640 135945692 -9643596 + MADE1 DNA Mariner 29 80 0 236 271 116 13 chr10 135946257 135946383 -9642905 + MIR SINE MIR 44 183 -79 410 317 30 45 chr10 135948118 135948320 -9640968 - MIR SINE MIR -59 203 5 241 319 36 60 chr10 135948569 135948735 -9640553 + MIR SINE MIR 69 230 -32 205 258 30 30 chr10 135949033 135949099 -9640189 - MIR SINE MIR -65 143 78 193 237 289 18 chr10 135950274 135950388 -9638900 + MIR SINE MIR 7 151 -111 1931 133 0 24 chr10 135950753 135951047 -9638241 - AluSx SINE Alu -25 287 1 337 200 142 34 chr10 135951148 135951283 -9638005 + MIR3 SINE MIR 47 207 -1 205 240 20 0 chr10 135952899 135952949 -9636339 - MIR SINE MIR -13 249 199 986 211 14 31 chr10 135953226 135953449 -9635839 - MER20 DNA MER1_type 0 219 1 369 267 50 50 chr10 135953690 135953870 -9635418 + MIR3 SINE MIR 20 199 -9 1889 123 47 13 chr10 135957236 135957537 -9631751 + AluSx SINE Alu 1 311 -1 1233 139 16 53 chr10 135959010 135959255 -9630033 + THE1B LTR MaLR 129 364 0 1107 215 95 80 chr10 135959259 135959649 -9629639 - MLT1D LTR MaLR -109 396 1 356 239 177 9 chr10 135959952 135960065 -9629223 + MIR SINE MIR 20 151 -111 275 261 7 29 chr10 135962851 135962989 -9626299 + (CA)n Simple_repeat Simple_repeat 1 135 0 278 311 0 16 chr10 135963056 135963239 -9626049 + (CA)n Simple_repeat Simple_repeat 1 180 0 214 158 0 0 chr10 135963361 135963399 -9625889 + (CA)n Simple_repeat Simple_repeat 1 38 0 198 71 0 0 chr10 135963420 135963448 -9625840 + (CA)n Simple_repeat Simple_repeat 1 28 0 366 312 118 34 chr10 135963906 135964143 -9625145 - L2 LINE L2 -38 3234 2978 216 67 0 0 chr10 135964404 135964434 -9624854 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 206 273 0 0 chr10 135964635 135964679 -9624609 + MIR SINE MIR 19 62 -146 2215 110 72 20 chr10 135965145 135965491 -9623797 + THE1B LTR MaLR 1 364 0 240 310 11 11 chr10 135966916 135967003 -9622285 + MIR SINE MIR 30 116 -92 212 0 36 0 chr10 135967357 135967385 -9621903 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 531 96 0 0 chr10 135967702 135967785 -9621503 + (TG)n Simple_repeat Simple_repeat 1 83 0 937 189 40 0 chr10 135968430 135968631 -9620657 - MER63B DNA MER1_type 0 435 227 795 226 75 19 chr10 135968633 135968845 -9620443 - MER58A DNA MER1_type 0 224 1 * 1097 161 106 5 chr10 135968845 135969055 -9620233 - MER63B DNA MER1_type -204 232 1 289 296 67 73 chr10 135969057 135969236 -9620052 + MIR SINE MIR 49 226 -36 972 223 43 39 chr10 135969757 135970148 -9619140 + MER74B LTR ERVL 59 490 -132 754 333 77 36 chr10 135970203 135970669 -9618619 + L2 LINE L2 2818 3302 -11 428 288 41 127 chr10 135971116 135971509 -9617779 + L2 LINE L2 2914 3272 0 262 169 31 0 chr10 135972282 135972347 -9616941 + GA-rich Low_complexity Low_complexity 4 70 0 708 269 67 14 chr10 135973207 135973415 -9615873 + MIR SINE MIR 38 256 -6 510 319 31 0 chr10 135973436 135973599 -9615689 - MIR SINE MIR -80 182 15 450 219 29 9 chr10 135973776 135973881 -9615407 + MER94 DNA DNA 2 108 -26 1296 293 61 41 chr10 135974029 135975151 -9614137 - L1MEd LINE L1 -4564 1746 561 3943 177 55 19 chr10 135976260 135977381 -9611907 + L1MB7 LINE L1 5009 6179 -5 894 167 46 6 chr10 135977461 135977635 -9611653 + MER53 DNA DNA 1 181 -8 294 284 15 52 chr10 135977760 135977894 -9611394 - MIR3 SINE MIR -65 143 15 487 308 6 71 chr10 135978698 135978880 -9610408 - MER5A DNA MER1_type -1 188 19 191 273 55 0 chr10 135979318 135979373 -9609915 + MIR3 SINE MIR 136 193 -15 228 135 0 0 chr10 135981098 135981135 -9608153 + (GA)n Simple_repeat Simple_repeat 2 38 0 239 160 85 128 chr10 135981528 135981622 -9607666 - MIR SINE MIR -49 213 124 2217 116 134 11 chr10 135981842 135982223 -9607065 + MSTA LTR MaLR 1 428 0 476 280 8 0 chr10 135982236 135982354 -9606934 - MIR SINE MIR -37 225 107 1605 237 42 24 chr10 135982383 135982835 -9606453 - MLT1C LTR MaLR 0 467 8 626 306 80 22 chr10 135982848 135983123 -9606165 + MLT1J2 LTR MaLR 30 320 -130 239 225 113 0 chr10 135983149 135983220 -9606068 + MLT1J2 LTR MaLR 372 450 0 191 421 13 0 chr10 135983222 135983298 -9605990 - MIR SINE MIR -175 87 11 26 0 0 0 chr10 135984517 135984543 -9604745 + AT_rich Low_complexity Low_complexity 1 26 0 1641 201 108 13 chr10 135984630 135985102 -9604186 - L1ME2 LINE L1 -2 6162 5646 453 197 76 0 chr10 135985839 135985971 -9603317 - L1ME4a LINE L1 -4 6117 5976 852 276 28 22 chr10 135985974 135986332 -9602956 - L1ME4a LINE L1 -181 5940 5581 1799 134 3 33 chr10 135986341 135986648 -9602640 - AluSx SINE Alu -10 302 5 413 283 71 9 chr10 135987191 135987304 -9601984 + L2 LINE L2 3153 3272 0 2139 101 13 0 chr10 135987726 135988034 -9601254 - AluSx SINE Alu 0 312 1 722 259 110 19 chr10 135988589 135988901 -9600387 - MLT1I LTR MaLR 0 409 67 319 335 114 0 chr10 135989029 135989205 -9600083 + L2 LINE L2 3075 3270 -2 372 309 73 31 chr10 135989632 135989823 -9599465 + MIR SINE MIR 7 205 -57 803 164 0 22 chr10 135990815 135990949 -9598339 - FLAM_C SINE Alu 0 133 3 235 244 0 0 chr10 135991066 135991107 -9598181 + MER58 DNA MER1_type 2 42 -173 477 125 159 0 chr10 135991120 135991208 -9598080 + MER58 DNA MER1_type 2319 2420 0 320 293 92 21 chr10 135991375 135991614 -9597674 + LTR16A1 LTR ERVL 202 457 0 731 292 73 0 chr10 135992016 135992235 -9597053 - MIR SINE MIR 0 262 28 2110 211 114 47 chr10 135993580 135994170 -9595118 + L1MA8 LINE L1 5479 6117 -174 1920 107 13 40 chr10 135994170 135994469 -9594819 + AluSx SINE Alu 1 291 -21 2110 211 114 47 chr10 135994469 135994519 -9594769 + L1MA8 LINE L1 6117 6162 -129 180 352 22 55 chr10 135994709 135994730 -9594558 - L3 LINE CR1 -1479 98 78 2534 164 39 4 chr10 135994730 135995198 -9594090 - L1MB5 LINE L1 -14 6160 5677 180 352 22 55 chr10 135995198 135995267 -9594021 - L3 LINE CR1 -1499 78 11 225 0 0 0 chr10 135996379 135996404 -9592884 + (A)n Simple_repeat Simple_repeat 1 25 0 324 0 0 0 chr10 135999055 135999091 -9590197 + (TG)n Simple_repeat Simple_repeat 2 37 0 386 322 103 23 chr10 136000836 136001010 -9588278 - L3 LINE CR1 -2 1575 1388 946 262 31 4 chr10 136001024 136001249 -9588039 + MIR SINE MIR 2 232 -30 198 325 62 0 chr10 136001505 136001585 -9587703 - L2 LINE L2 -35 3278 3194 2176 112 0 0 chr10 136001709 136002012 -9587276 + AluSg SINE Alu 1 303 -7 347 25 138 138 chr10 136002879 136002959 -9586329 + MADE1 DNA Mariner 1 80 0 218 100 25 0 chr10 136003077 136003117 -9586171 + L2 LINE L2 3273 3313 0 243 214 129 0 chr10 136003192 136003262 -9586026 - MIR SINE MIR 0 262 184 321 299 72 30 chr10 136005233 136005400 -9583888 - MIR3 SINE MIR -19 189 16 1229 233 31 13 chr10 136005637 136005954 -9583334 + MLT1A1 LTR MaLR 2 324 -41 214 205 0 0 chr10 136006581 136006620 -9582668 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 352 300 77 77 chr10 136006621 136006908 -9582380 - L1ME4a LINE L1 -88 6033 5747 547 185 108 117 chr10 136007463 136007973 -9581315 - MLT1G1 LTR MaLR 0 555 1 351 208 123 23 chr10 136007979 136008109 -9581179 - MLT1G1-int LTR MaLR -6 1365 1223 2078 111 0 26 chr10 136008278 136008584 -9580704 + AluSg SINE Alu 1 298 -12 305 296 62 0 chr10 136008678 136008759 -9580529 + L2 LINE L2 1872 1957 -1357 408 316 15 8 chr10 136009021 136009154 -9580134 - MIR3 SINE MIR -14 194 61 220 352 48 16 chr10 136009208 136009333 -9579955 - L2 LINE L2 -5 3267 3139 516 280 8 0 chr10 136012113 136012238 -9577050 - L2 LINE L2 0 3272 3147 2140 101 0 0 chr10 136013232 136013529 -9575759 + AluSg SINE Alu 1 297 -13 459 302 90 32 chr10 136013529 136013718 -9575570 + MIR SINE MIR 28 227 -35 370 291 7 7 chr10 136014335 136014486 -9574802 + GA-rich Low_complexity Low_complexity 2 152 0 327 141 12 47 chr10 136014500 136014585 -9574703 + GA-rich Low_complexity Low_complexity 1 82 0 235 238 42 126 chr10 136014634 136014777 -9574511 - MIR SINE MIR -19 243 113 220 205 0 0 chr10 136015435 136015474 -9573814 + (TG)n Simple_repeat Simple_repeat 2 40 0 180 0 0 0 chr10 136015930 136015950 -9573338 + (TG)n Simple_repeat Simple_repeat 2 21 0 458 228 18 9 chr10 136016729 136016843 -9572445 + MER117 DNA MER1_type 50 164 -33 417 157 0 36 chr10 136017368 136017451 -9571837 - MER53 DNA DNA -4 185 106 516 311 17 22 chr10 136017626 136017806 -9571482 + MIR SINE MIR 2 180 -82 246 246 56 71 chr10 136017907 136018033 -9571255 + MIR3 SINE MIR 33 156 -52 252 0 0 0 chr10 136018045 136018073 -9571215 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 2054 118 3 0 chr10 136018073 136018362 -9570926 - AluSx SINE Alu -22 290 1 2085 107 0 24 chr10 136018368 136018666 -9570622 - AluSx SINE Alu -21 291 1 2010 124 7 3 chr10 136018750 136019056 -9570232 + AluSx SINE Alu 1 307 -5 420 268 89 48 chr10 136020297 136020465 -9568823 - L2 LINE L2 -3 3269 3095 524 271 70 39 chr10 136022157 136022386 -9566902 + MLT1J2 LTR MaLR 1 236 -214 342 253 0 0 chr10 136022422 136022501 -9566787 + MLT1J2 LTR MaLR 361 439 -11 265 372 29 34 chr10 136023251 136023458 -9565830 + L2 LINE L2 2856 3061 -211 581 332 55 5 chr10 136024324 136024526 -9564762 - MIR SINE MIR -2 260 49 2026 171 13 91 chr10 136024739 136025188 -9564100 - MLT2D LTR ERVL 0 414 1 260 308 154 34 chr10 136025241 136025475 -9563813 + MIR SINE MIR 1 262 0 500 301 156 0 chr10 136025799 136025985 -9563303 - MIR SINE MIR -46 216 2 222 229 0 43 chr10 136026092 136026162 -9563126 + MIR SINE MIR 81 147 -115 338 277 46 31 chr10 136026874 136027004 -9562284 - MIR SINE MIR -116 146 15 230 270 16 0 chr10 136028129 136028192 -9561096 - L2 LINE L2 0 3313 3250 455 212 5 38 chr10 136028243 136028427 -9560861 + CT-rich Low_complexity Low_complexity 1 178 0 236 286 33 11 chr10 136028986 136029077 -9560211 + L2 LINE L2 3197 3289 -24 2226 110 9 38 chr10 136031009 136031328 -9557960 - AluSg SINE Alu 0 310 1 237 280 88 24 chr10 136032867 136032992 -9556296 + L3 LINE CR1 1403 1535 -42 432 196 54 113 chr10 136033259 136033427 -9555861 - MIR3 SINE MIR -46 162 5 183 250 0 0 chr10 136033413 136033449 -9555839 + L2 LINE L2 3217 3252 -20 * 492 310 14 0 chr10 136033712 136033854 -9555434 + MIR SINE MIR 98 241 -21 612 323 61 43 chr10 136034112 136034786 -9554502 + L2 LINE L2 2582 3265 -7 769 314 39 24 chr10 136035103 136035440 -9553848 + LTR16C LTR ERVL 150 491 0 1331 178 22 142 chr10 136035498 136035913 -9553375 + MLT1A1 LTR MaLR 1 365 0 297 196 76 68 chr10 136036035 136036142 -9553146 - MIR SINE MIR -64 144 56 217 283 195 0 chr10 136036354 136036467 -9552821 - MIR SINE MIR -1 261 127 * 225 343 29 0 chr10 136036466 136036536 -9552752 + L2 LINE L2 3240 3311 -2 * 226 235 39 0 chr10 136036533 136036584 -9552704 - MIR SINE MIR -140 122 70 283 339 74 54 chr10 136037461 136037703 -9551585 - L2 LINE L2 -56 3216 2970 5580 53 22 18 chr10 136037806 136038342 -9550946 - L1PA7 LINE L1 0 6154 5613 2455 68 0 0 chr10 136038342 136038635 -9550653 - AluY SINE Alu -18 293 1 5580 53 22 18 chr10 136038635 136038816 -9550472 - L1PA7 LINE L1 -541 5613 5434 719 309 50 41 chr10 136039444 136039469 -9549819 - L2 LINE L2 -629 2685 2662 2395 82 7 13 chr10 136039469 136039774 -9549514 + AluSc SINE Alu 1 303 -6 719 309 50 41 chr10 136039774 136040185 -9549103 - L2 LINE L2 -652 2662 2245 623 158 18 18 chr10 136041282 136041453 -9547835 + (TCCA)n Simple_repeat Simple_repeat 3 173 0 1179 247 72 31 chr10 136041495 136041948 -9547340 - MER110A LTR ERV1 0 468 40 215 259 93 56 chr10 136043256 136043364 -9545924 + MIR3 SINE MIR 13 124 -84 678 167 30 0 chr10 136043814 136043946 -9545342 + MER5A DNA MER1_type 1 136 -53 218 261 76 59 chr10 136044099 136044218 -9545070 - MIR3 SINE MIR -7 201 81 1764 212 69 8 chr10 136045085 136045520 -9543768 - L1MB5 LINE L1 0 6174 5716 257 273 173 9 chr10 136045529 136045639 -9543649 - MIR3 SINE MIR -66 142 15 610 265 7 8 chr10 136045833 136045985 -9543303 - L1ME1 LINE L1 0 6334 6183 2493 152 36 10 chr10 136045985 136046400 -9542888 + MSTB LTR MaLR 1 426 0 610 265 7 8 chr10 136046400 136046415 -9542873 - L1ME1 LINE L1 -151 6183 6012 665 245 87 0 chr10 136046429 136046669 -9542619 - L1ME1 LINE L1 -282 5884 5603 293 212 76 0 chr10 136048420 136048486 -9540802 + MIR3 SINE MIR 102 172 -36 573 200 76 48 chr10 136048488 136048633 -9540655 - L2 LINE L2 -1 3271 3123 378 252 202 0 chr10 136049283 136049402 -9539886 + MIR3 SINE MIR 16 158 -50 189 355 16 0 chr10 136050402 136050464 -9538824 - L2 LINE L2 -20 3293 3231 233 191 21 21 chr10 136052211 136052258 -9537030 + MIR SINE MIR 20 66 -196 222 257 14 68 chr10 136053363 136053437 -9535851 - L3b LINE CR1 -115 1468 1399 309 89 0 0 chr10 136053801 136053846 -9535442 + (TATG)n Simple_repeat Simple_repeat 3 47 0 204 311 66 49 chr10 136054190 136054312 -9534976 + L2 LINE L2 3143 3266 -6 211 324 40 0 chr10 136054920 136054994 -9534294 + MIR SINE MIR 90 166 -96 644 281 18 54 chr10 136055808 136056029 -9533259 + MIR SINE MIR 21 233 -29 1868 172 3 10 chr10 136056700 136057008 -9532280 + AluJo SINE Alu 1 306 -6 339 296 85 22 chr10 136057823 136057967 -9531321 + MIR SINE MIR 14 156 -63 242 283 0 0 chr10 136058030 136058083 -9531205 + polypyrimidine Low_complexity Low_complexity 3 55 0 405 244 87 71 chr10 136058400 136058568 -9530720 + MLT1L LTR MaLR 131 306 -309 1246 178 48 122 chr10 136058568 136058962 -9530326 + MLT1A1 LTR MaLR 1 365 0 405 244 87 71 chr10 136058962 136059059 -9530229 + MLT1L LTR MaLR 306 400 -215 1953 191 18 10 chr10 136059110 136059509 -9529779 - L1MB7 LINE L1 -1 6183 5782 225 182 0 0 chr10 136059514 136059558 -9529730 + LTR66 LTR ERVL 394 437 -173 812 176 0 7 chr10 136059575 136059728 -9529560 - L1MB7 LINE L1 -391 5793 5642 686 254 21 93 chr10 136059761 136060040 -9529248 + MIR SINE MIR 4 262 0 563 313 69 9 chr10 136060970 136061203 -9528085 + MIR SINE MIR 9 255 -7 1898 154 37 13 chr10 136062914 136063213 -9526075 + AluJo SINE Alu 1 306 -6 2241 87 35 0 chr10 136063583 136063871 -9525417 - AluY SINE Alu -13 298 1 182 231 192 0 chr10 136064056 136064108 -9525180 - L2 LINE L2 -6 3307 3246 196 324 42 14 chr10 136064951 136065022 -9524266 + L2 LINE L2 3191 3263 -50 1050 212 5 0 chr10 136066245 136066448 -9522840 - MER58A DNA MER1_type -15 209 6 238 287 140 35 chr10 136067566 136067709 -9521579 + MIR3 SINE MIR 15 172 -36 487 139 60 174 chr10 136067712 136067913 -9521375 + MER53 DNA DNA 1 178 -11 269 231 0 0 chr10 136068119 136068171 -9521117 + L2 LINE L2 3262 3313 0 622 280 99 0 chr10 136068330 136068512 -9520776 + MIR SINE MIR 2 201 -61 2373 122 28 17 chr10 136069170 136069530 -9519758 + THE1B LTR MaLR 1 364 0 232 241 38 25 chr10 136071264 136071343 -9517945 - MER5A DNA MER1_type -32 157 78 329 346 133 27 chr10 136071411 136072072 -9517216 + L2 LINE L2 2233 2963 -351 318 195 0 61 chr10 136072314 136072396 -9516892 + MER116 DNA Mariner 4 80 0 240 296 37 37 chr10 136073225 136073333 -9515955 - MIR3 SINE MIR -53 155 48 427 107 0 0 chr10 136073502 136073558 -9515730 + Alu SINE Alu 2 57 -255 1569 94 0 9 chr10 136073585 136073808 -9515480 - AluSc SINE Alu -23 286 66 1975 121 0 3 chr10 136073849 136074131 -9515157 - AluSx SINE Alu -31 281 1 219 167 0 0 chr10 136074180 136074222 -9515066 + (TAA)n Simple_repeat Simple_repeat 2 43 0 996 204 51 14 chr10 136075595 136075811 -9513477 - MER58A DNA MER1_type 0 224 1 693 57 0 0 chr10 136075978 136076066 -9513222 + AluSp/q SINE Alu 215 302 -11 359 262 57 110 chr10 136076421 136076556 -9512732 - MLT1G1 LTR MaLR -168 422 308 1688 148 50 7 chr10 136076556 136076834 -9512454 - AluSx SINE Alu -22 290 1 359 262 57 110 chr10 136076834 136076980 -9512308 - MLT1G1 LTR MaLR -282 308 156 473 244 52 22 chr10 136076980 136077115 -9512173 + MSTC LTR MaLR 1 139 -235 354 171 53 13 chr10 136077116 136077192 -9512096 - LTR54 LTR ERV1 0 510 432 * 834 257 187 7 chr10 136077172 136077489 -9511799 - MER57A LTR ERV1 -58 345 1 1028 180 99 30 chr10 136077490 136077723 -9511565 + MSTC LTR MaLR 180 428 0 567 246 70 0 chr10 136077726 136077868 -9511420 - MLT1G1 LTR MaLR -396 199 48 233 292 156 21 chr10 136077931 136078027 -9511261 - MIR SINE MIR -126 136 28 519 259 9 0 chr10 136078745 136078861 -9510427 - MIR3 SINE MIR -11 197 81 207 0 0 0 chr10 136078995 136079018 -9510270 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 222 118 0 0 chr10 136079567 136079601 -9509687 + (GGAGAA)n Simple_repeat Simple_repeat 4 37 0 487 299 27 49 chr10 136079727 136079911 -9509377 + MER5A DNA MER1_type 3 182 -7 21 36 0 0 chr10 136083273 136083301 -9505987 + AT_rich Low_complexity Low_complexity 1 28 0 280 326 37 15 chr10 136083732 136083867 -9505421 + MIR3 SINE MIR 67 204 -4 281 305 42 0 chr10 136084571 136084666 -9504622 + MIR SINE MIR 114 212 -50 657 267 33 0 chr10 136084736 136084886 -9504402 - MIR SINE MIR -98 164 10 193 183 83 33 chr10 136085132 136085192 -9504096 + MIR SINE MIR 69 132 -76 484 224 45 15 chr10 136085324 136085463 -9503825 + MLT1J2 LTR MaLR 67 220 -189 601 288 82 64 chr10 136085610 136085987 -9503301 + L2 LINE L2 2893 3272 0 246 233 70 23 chr10 136086136 136086222 -9503066 + MIR SINE MIR 50 139 -69 352 238 25 0 chr10 136087766 136087846 -9501442 + MIR3 SINE MIR 91 172 -36 518 167 74 0 chr10 136088353 136088461 -9500827 + ORSL DNA AcHobo 3 118 -157 371 246 135 58 chr10 136088588 136088795 -9500493 + ORSL DNA AcHobo 53 275 0 242 221 179 7 chr10 136089014 136089122 -9500166 + MIR SINE MIR 20 150 -112 2369 51 27 0 chr10 136090445 136090740 -9498548 - AluY SINE Alu -8 303 1 465 274 65 7 chr10 136091080 136091233 -9498055 - MIR3 SINE MIR -11 197 36 318 107 0 0 chr10 136092456 136092512 -9496776 + (TTTTA)n Simple_repeat Simple_repeat 5 60 0 2364 60 0 0 chr10 136092516 136092814 -9496474 - AluY SINE Alu -13 298 1 1414 56 45 0 chr10 136092816 136092995 -9496293 - L1P2 LINE L1 -534 5620 5434 678 72 0 0 chr10 136093648 136093731 -9495557 + AluY SINE Alu 2 84 -234 268 259 12 12 chr10 136093862 136093947 -9495341 - MIR SINE MIR -147 115 31 29 28 0 0 chr10 136094009 136094045 -9495243 + AT_rich Low_complexity Low_complexity 1 36 0 4934 123 66 6 chr10 136094045 136094879 -9494409 - L1PA16 LINE L1 -7 6159 5276 11140 213 28 9 chr10 136094947 136097559 -9491729 + L1 LINE L1 2632 5294 -852 683 323 145 29 chr10 136098013 136098466 -9490822 - L2 LINE L2 0 3272 2873 2055 120 0 7 chr10 136098466 136098767 -9490521 + AluSg SINE Alu 1 299 -11 683 323 145 29 chr10 136098767 136099571 -9489717 - L2 LINE L2 -399 2873 1873 1282 144 65 0 chr10 136099752 136099967 -9489321 + MER2 DNA MER2_type 1 229 -116 1806 186 90 0 chr10 136100650 136100983 -9488305 - MLT1A1 LTR MaLR -2 363 1 264 204 106 35 chr10 136101157 136101270 -9488018 - MIR3 SINE MIR -27 181 61 522 219 213 84 chr10 136101301 136101644 -9487644 + MLT1J LTR MaLR 109 495 -16 582 291 93 49 chr10 136102373 136102761 -9486527 + L1ME4a LINE L1 5360 5764 -357 44 56 0 0 chr10 136102789 136102861 -9486427 + AT_rich Low_complexity Low_complexity 1 72 0 1657 253 19 45 chr10 136102922 136103518 -9485770 - L1ME1 LINE L1 -6 6229 5650 1390 65 60 0 chr10 136103524 136103708 -9485580 - MER30 DNA MER1_type -35 195 1 6830 221 45 25 chr10 136103708 136105482 -9483806 - L1ME1 LINE L1 -571 5664 3829 243 103 0 0 chr10 136105482 136105521 -9483767 + (CA)n Simple_repeat Simple_repeat 2 40 0 6830 221 45 25 chr10 136105521 136105944 -9483344 - L1ME1 LINE L1 -2406 3829 3416 934 293 56 14 chr10 136106075 136106559 -9482729 - L1ME1 LINE L1 -4769 1627 1124 316 226 171 37 chr10 136106608 136106825 -9482463 + L1ME4a LINE L1 5867 6112 -9 2207 113 106 0 chr10 136107244 136107573 -9481715 - THE1B LTR MaLR 0 364 1 313 292 0 0 chr10 136107676 136107748 -9481540 + MIR SINE MIR 52 123 -85 1743 201 33 38 chr10 136107766 136108158 -9481130 - MLT1B LTR MaLR 0 390 1 451 245 195 13 chr10 136108181 136108340 -9480948 - MER5A DNA MER1_type 0 189 2 2153 114 35 46 chr10 136108465 136108833 -9480455 + THE1B LTR MaLR 1 364 0 180 0 0 0 chr10 136109195 136109215 -9480073 + (T)n Simple_repeat Simple_repeat 1 20 0 229 217 17 19 chr10 136110235 136110294 -9478994 - MIR SINE MIR -61 147 94 498 253 169 0 chr10 136110315 136110469 -9478819 + MER5A DNA MER1_type 4 183 -6 262 301 32 0 chr10 136111269 136111362 -9477926 + MIR SINE MIR 16 111 -151 287 236 281 0 chr10 136111610 136111699 -9477589 - MER81 DNA DNA 0 114 1 199 221 44 29 chr10 136111734 136111802 -9477486 + MIR SINE MIR 102 170 -92 247 307 95 65 chr10 136111818 136112049 -9477239 + L2 LINE L2 3026 3263 -9 499 234 0 48 chr10 136112193 136112317 -9476971 - MIR SINE MIR -71 191 74 363 325 74 0 chr10 136113128 136113291 -9475997 + MIR SINE MIR 21 195 -67 605 252 88 60 chr10 136113505 136113935 -9475353 - L2 LINE L2 -249 3064 2625 203 197 53 92 chr10 136114172 136114248 -9475040 - MIR SINE MIR -173 89 17 2333 52 3 29 chr10 136114255 136114563 -9474725 - AluY SINE Alu -11 300 1 689 277 23 14 chr10 136115490 136115710 -9473578 + MLT1H LTR MaLR 21 242 -307 377 249 77 83 chr10 136115733 136115914 -9473374 + MLT1H LTR MaLR 362 541 -8 641 308 19 10 chr10 136116026 136116234 -9473054 - MIR SINE MIR -2 260 51 797 131 0 0 chr10 136116428 136116550 -9472738 + AluSg/x SINE Alu 181 302 -10 21 0 0 0 chr10 136116739 136116760 -9472528 + AT_rich Low_complexity Low_complexity 1 21 0 434 292 8 0 chr10 136117328 136117448 -9471840 - MIR SINE MIR -45 217 97 400 239 18 53 chr10 136117450 136117563 -9471725 - L2 LINE L2 -4 3309 3201 296 295 11 32 chr10 136117874 136117969 -9471319 - MIR SINE MIR -67 141 49 182 281 47 31 chr10 136118400 136118464 -9470824 - MIR SINE MIR -61 147 83 741 269 9 37 chr10 136118472 136118688 -9470600 - L2 LINE L2 -1 3312 3103 341 221 0 15 chr10 136118904 136119040 -9470248 + (CAT)n Simple_repeat Simple_repeat 3 136 0 210 229 0 0 chr10 136119066 136119114 -9470174 + (CAT)n Simple_repeat Simple_repeat 1 48 0 267 265 44 0 chr10 136119346 136119414 -9469874 + LTR40a LTR ERVL 187 257 -262 1126 160 0 19 chr10 136119414 136119620 -9469668 + AluJb SINE Alu 100 301 -11 470 364 24 10 chr10 136119793 136119868 -9469420 + MIR SINE MIR 47 119 -143 1997 133 0 10 chr10 136119868 136120187 -9469101 - AluSx SINE Alu 0 312 1 470 364 24 10 chr10 136120187 136120317 -9468971 + MIR SINE MIR 119 255 -7 218 216 40 81 chr10 136120766 136120840 -9468448 - L2 LINE L2 -5 3267 3197 351 232 182 61 chr10 136121095 136121276 -9468012 + MIR SINE MIR 48 250 -12 1037 286 77 10 chr10 136121305 136121721 -9467567 - LTR16A LTR ERVL -6 444 1 2390 109 0 3 chr10 136122736 136123049 -9466239 - AluSx SINE Alu 0 312 1 408 272 93 40 chr10 136123320 136123671 -9465617 + L1MC4 LINE L1 5649 5964 -157 441 242 150 20 chr10 136124808 136124961 -9464327 + L2 LINE L2 3120 3292 -21 345 339 39 0 chr10 136125034 136125161 -9464127 + MIR SINE MIR 34 165 -97 262 310 120 0 chr10 136125212 136125312 -9463976 + MIR SINE MIR 151 262 0 909 117 0 0 chr10 136125893 136126013 -9463275 + FLAM_C SINE Alu 1 120 -23 188 333 49 0 chr10 136126601 136126682 -9462606 - L2 LINE L2 -35 3278 3194 2062 142 3 0 chr10 136126806 136127108 -9462180 + AluSg SINE Alu 1 303 -7 254 75 138 138 chr10 136127975 136128055 -9461233 - MADE1 DNA Mariner 0 80 1 212 100 25 0 chr10 136128173 136128213 -9461075 + L2 LINE L2 3273 3313 0 294 296 0 0 chr10 136129035 136129123 -9460165 + (CAT)n Simple_repeat Simple_repeat 3 90 0 1356 210 51 70 chr10 136129295 136129666 -9459622 - MLT1A1 LTR MaLR -1 364 1 260 302 71 50 chr10 136129740 136129922 -9459366 - L2 LINE L2 -222 3050 2865 2053 250 25 17 chr10 136130583 136131171 -9458117 - L1MEc LINE L1 -1786 4429 3837 315 0 0 0 chr10 136131171 136131206 -9458082 + (TA)n Simple_repeat Simple_repeat 1 35 0 225 108 0 0 chr10 136131205 136131242 -9458046 + (CA)n Simple_repeat Simple_repeat 2 38 0 * 1303 261 19 16 chr10 136131245 136131675 -9457613 - L1MEc LINE L1 -2373 3842 3412 452 255 47 0 chr10 136131666 136131815 -9457473 - L1MEc LINE L1 -4277 2119 1964 * 349 312 22 22 chr10 136131818 136132049 -9457239 + L1MEc LINE L1 1265 1495 -4901 734 256 24 10 chr10 136132059 136132266 -9457022 - L1MEc LINE L1 -4449 1947 1738 246 158 13 26 chr10 136132366 136132442 -9456846 + CT-rich Low_complexity Low_complexity 1 75 0 224 315 14 0 chr10 136132460 136132533 -9456755 + CT-rich Low_complexity Low_complexity 6 79 0 214 175 0 0 chr10 136132572 136132612 -9456676 + (CA)n Simple_repeat Simple_repeat 1 40 0 2329 154 59 17 chr10 136133653 136134062 -9455226 - MSTB LTR MaLR 0 426 1 790 256 50 0 chr10 136134172 136134371 -9454917 - MER63A DNA MER1_type 0 210 2 219 250 0 0 chr10 136134385 136134433 -9454855 + MIR SINE MIR 87 134 -128 1855 176 43 48 chr10 136134694 136135092 -9454196 + MSTD LTR MaLR 1 396 0 449 246 78 67 chr10 136135151 136135330 -9453958 - MER5A DNA MER1_type -2 187 7 40 21 0 0 chr10 136135470 136135517 -9453771 + AT_rich Low_complexity Low_complexity 1 47 0 272 320 0 30 chr10 136135587 136135687 -9453601 - MIR SINE MIR -67 195 99 243 0 0 0 chr10 136135874 136135901 -9453387 + (CA)n Simple_repeat Simple_repeat 2 28 0 309 289 87 10 chr10 136136506 136136610 -9452678 - MIR SINE MIR -78 184 73 245 271 131 9 chr10 136137257 136137364 -9451924 - MIR SINE MIR -73 135 16 471 292 49 0 chr10 136137728 136137872 -9451416 - MIR SINE MIR -66 196 46 304 311 102 20 chr10 136138026 136138236 -9451052 - MIR SINE MIR -1 261 30 2043 57 4 0 chr10 136138841 136139085 -9450203 + AluSq SINE Alu 1 245 -68 1906 272 120 13 chr10 136141990 136142616 -9446672 - MER115 DNA AcHobo 0 693 1 384 287 58 0 chr10 136143353 136143509 -9445779 + MIR SINE MIR 40 208 -54 333 259 112 28 chr10 136143770 136143913 -9445375 + MIR3 SINE MIR 13 167 -41 311 255 11 21 chr10 136144315 136144409 -9444879 + MER81 DNA DNA 1 93 -21 472 294 30 65 chr10 136144457 136144658 -9444630 + MIR SINE MIR 67 260 -2 190 308 68 60 chr10 136145129 136145246 -9444042 + MIR3 SINE MIR 4 121 -87 2237 135 0 0 chr10 136145496 136145861 -9443427 - AluSq SINE Alu 0 365 1 277 290 137 8 chr10 136146208 136146332 -9442956 - MIR SINE MIR -111 151 12 429 70 0 0 chr10 136147409 136147466 -9441822 + (TG)n Simple_repeat Simple_repeat 2 58 0 236 313 143 52 chr10 136147633 136147940 -9441348 - L3 LINE CR1 -199 1378 1044 903 187 0 113 chr10 136147974 136148204 -9441084 - MER20 DNA MER1_type -12 207 4 323 298 18 9 chr10 136148325 136148439 -9440849 + MIR SINE MIR 7 121 -141 708 179 81 88 chr10 136149416 136149573 -9439715 + MER33 DNA MER1_type 1 150 -2435 694 192 0 8 chr10 136149573 136149698 -9439590 + FLAM_C SINE Alu 1 124 -9 708 179 81 88 chr10 136149698 136149800 -9439488 + MER33 DNA MER1_type 150 251 -73 502 270 34 27 chr10 136151004 136151152 -9438136 + MER5B DNA MER1_type 5 153 -25 297 276 17 86 chr10 136151176 136151292 -9437996 - MIR SINE MIR -49 159 51 222 269 106 50 chr10 136151971 136152112 -9437176 - MIR SINE MIR -80 182 34 2085 144 3 0 chr10 136152449 136152748 -9436540 - AluSx SINE Alu -11 301 2 272 127 0 0 chr10 136152749 136152796 -9436492 - MIR SINE MIR -55 153 106 215 346 0 13 chr10 136153534 136153612 -9435676 - MIR SINE MIR -83 125 49 354 195 0 0 chr10 136154588 136154665 -9434623 + (TG)n Simple_repeat Simple_repeat 1 77 0 212 336 121 0 chr10 136154843 136154959 -9434329 + MIR SINE MIR 25 154 -108 2091 192 62 5 chr10 136156057 136156489 -9432799 - MLT1C LTR MaLR -4 463 7 328 288 169 0 chr10 136157444 136157562 -9431726 + MIR SINE MIR 107 244 -18 434 242 17 42 chr10 136158418 136158538 -9430750 + MIR3 SINE MIR 70 186 -22 332 346 24 8 chr10 136158990 136159117 -9430171 - MIR3 SINE MIR -31 177 49 584 329 96 5 chr10 136159154 136159373 -9429915 + MIR SINE MIR 23 261 -1 761 113 0 9 chr10 136160863 136160969 -9428319 - AluSp/q SINE Alu -15 298 194 808 257 27 0 chr10 136161504 136161691 -9427597 - MER63A DNA MER1_type -18 192 1 307 311 68 34 chr10 136163339 136163487 -9425801 - MER5A DNA MER1_type 0 189 37 273 194 11 129 chr10 136164314 136164407 -9424881 - MIR SINE MIR -75 187 106 318 164 0 82 chr10 136165635 136165708 -9423580 - L2 LINE L2 -6 3307 3241 303 301 158 33 chr10 136166082 136166418 -9422870 + HAL1 LINE L1 926 1303 -1204 322 391 0 0 chr10 136168442 136168621 -9420667 + (TG)n Simple_repeat Simple_repeat 2 180 0 446 305 152 5 chr10 136169428 136169638 -9419650 - MIR SINE MIR -7 255 15 309 273 34 0 chr10 136169658 136169746 -9419542 - MIR3 SINE MIR -35 173 83 322 264 145 6 chr10 136169814 136169973 -9419315 + MIR SINE MIR 51 231 -31 381 317 158 10 chr10 136170109 136170311 -9418977 + MIR SINE MIR 22 253 -9 417 314 64 6 chr10 136170967 136171123 -9418165 - MIR SINE MIR -19 243 79 183 325 12 24 chr10 136171307 136171390 -9417898 + MIR SINE MIR 60 141 -67 1807 213 76 23 chr10 136171399 136172148 -9417140 + L1ME2 LINE L1 4778 5570 -594 414 235 0 12 chr10 136172203 136172322 -9416966 + L1ME1 LINE L1 6057 6178 0 755 193 125 59 chr10 136172330 136172646 -9416642 + L1ME2 LINE L1 5580 6039 -125 2050 110 10 7 chr10 136172663 136172963 -9416325 - AluSp SINE Alu -12 301 1 382 321 30 24 chr10 136173329 136173494 -9415794 + MIR3 SINE MIR 1 166 -42 2022 210 82 76 chr10 136174501 136174997 -9414291 - L1ME2 LINE L1 -13 6151 5659 2115 125 0 0 chr10 136174997 136175294 -9413994 - AluSg SINE Alu -13 297 1 2022 210 82 76 chr10 136175294 136176375 -9412913 - L1ME2 LINE L1 -505 5659 4345 203 243 0 0 chr10 136176377 136176414 -9412874 + C-rich Low_complexity Low_complexity 5 41 0 629 165 17 0 chr10 136176811 136176926 -9412362 + FRAM SINE Alu 56 172 -4 1217 179 0 13 chr10 136178448 136178677 -9410611 + AluJb SINE Alu 1 226 -86 243 339 75 11 chr10 136180025 136180199 -9409089 - L1ME LINE L1 -232 5889 5705 689 204 86 11 chr10 136180447 136180667 -9408621 - MER106B DNA MER1_type -2 234 1 313 250 125 31 chr10 136181594 136181722 -9407566 + MIR SINE MIR 11 150 -112 2153 128 56 11 chr10 136184718 136185077 -9404211 - THE1C LTR MaLR 0 375 1 1054 226 181 3 chr10 136185082 136185392 -9403896 - MLT1A1 LTR MaLR 0 365 1 2185 95 0 0 chr10 136186415 136186741 -9402547 - AluSp SINE Alu 0 327 2 1281 185 94 41 chr10 136186873 136187131 -9402157 - MLT1A1 LTR MaLR -7 358 76 1485 172 47 24 chr10 136187131 136187427 -9401861 - AluJb SINE Alu -9 303 1 1281 185 94 41 chr10 136187427 136187508 -9401780 - MLT1A1 LTR MaLR -289 76 1 1816 107 52 0 chr10 136188310 136188628 -9400660 - AluSx SINE Alu 0 332 1 1027 231 70 78 chr10 136190352 136190798 -9398490 - MLT1J LTR MaLR 0 511 70 628 281 95 34 chr10 136191378 136191985 -9397303 + L1ME3A LINE L1 2499 3150 -2996 1747 134 0 0 chr10 136191985 136192238 -9397050 + AluSx SINE Alu 39 291 -21 628 281 95 34 chr10 136192238 136192285 -9397003 + L1ME3A LINE L1 3150 3193 -2953 749 280 108 29 chr10 136192412 136193126 -9396162 + L1ME3A LINE L1 5090 5885 -285 1829 100 4 4 chr10 136193422 136193691 -9395597 + AluSc SINE Alu 27 295 -14 913 273 71 22 chr10 136194011 136194417 -9394871 - L1MC5 LINE L1 -30 7931 7506 441 231 26 34 chr10 136195813 136195930 -9393358 + MIR SINE MIR 38 153 -109 200 259 37 0 chr10 136196739 136196793 -9392495 + CT-rich Low_complexity Low_complexity 5 60 0 944 248 125 54 chr10 136198090 136198554 -9390734 + MLT1D LTR MaLR 1 497 -8 495 340 24 28 chr10 136198720 136198932 -9390356 + MIR SINE MIR 47 257 -5 1108 185 149 74 chr10 136199819 136200183 -9389105 - MLT1B LTR MaLR -1 466 1 203 118 88 0 chr10 136200990 136201024 -9388264 - MIR SINE MIR -120 142 106 609 184 68 25 chr10 136201324 136201487 -9387801 + LTR36 LTR ERV1 1 170 -441 954 214 161 21 chr10 136201552 136201832 -9387456 + LTR36 LTR ERV1 293 611 0 225 296 43 70 chr10 136203113 136203299 -9385989 - MIR SINE MIR -43 219 39 490 265 62 92 chr10 136203570 136203940 -9385348 + L2 LINE L2 2952 3310 -3 212 260 94 39 chr10 136203956 136204037 -9385251 - MIR SINE MIR -104 104 20 1432 234 116 35 chr10 136205238 136205662 -9383626 + LTR22A LTR ERVK 1 458 0 526 285 240 25 chr10 136206013 136206469 -9382819 - L2 LINE L2 0 3313 2756 2000 112 0 48 chr10 136206620 136206933 -9382355 + AluSg SINE Alu 6 303 -7 249 248 106 66 chr10 136206979 136207186 -9382102 - L2 LINE L2 -264 3008 2770 239 307 85 57 chr10 136209015 136209191 -9380097 + MIR SINE MIR 11 191 -71 226 158 0 0 chr10 136211482 136211520 -9377768 - MIR SINE MIR -140 122 85 215 333 52 52 chr10 136211738 136211873 -9377415 + MIR3 SINE MIR 21 155 -53 249 340 40 0 chr10 136211971 136212071 -9377217 - L2 LINE L2 -1 3271 3168 490 250 24 0 chr10 136213650 136213774 -9375514 - L1MD2 LINE L1 -10 6349 6223 236 111 22 0 chr10 136213810 136213855 -9375433 + (TG)n Simple_repeat Simple_repeat 1 46 0 828 114 30 23 chr10 136213870 136214002 -9375286 - MER20 DNA MER1_type -57 162 30 522 215 80 61 chr10 136214020 136214183 -9375105 - L1MD2 LINE L1 -129 6230 6065 269 341 178 10 chr10 136214258 136214466 -9374822 - L3 LINE CR1 -6 1571 1329 203 313 168 8 chr10 136216114 136216245 -9373043 + MIR SINE MIR 48 199 -63 323 281 136 38 chr10 136216277 136216512 -9372776 + LTR16C LTR ERVL 233 490 -1 339 65 0 0 chr10 136216788 136216834 -9372454 + (GA)n Simple_repeat Simple_repeat 1 46 0 328 223 124 33 chr10 136217754 136217875 -9371413 + MIR3 SINE MIR 12 143 -65 253 333 39 46 chr10 136218082 136218235 -9371053 - MIR SINE MIR -99 163 12 225 169 301 12 chr10 136219630 136219713 -9369575 - L2 LINE L2 0 3313 3207 742 232 134 7 chr10 136219889 136220165 -9369123 + LTR16A1 LTR ERVL 147 457 0 281 293 135 33 chr10 136220186 136220283 -9369005 - L2 LINE L2 -194 3078 2992 339 25 0 0 chr10 136220283 136220323 -9368965 + (GGGAA)n Simple_repeat Simple_repeat 4 43 0 281 293 135 33 chr10 136220323 136220493 -9368795 - L2 LINE L2 -280 2992 2782 2359 63 0 0 chr10 136220698 136220985 -9368303 - AluY SINE Alu -8 303 17 214 156 22 22 chr10 136221877 136221922 -9367366 + (TTA)n Simple_repeat Simple_repeat 3 47 0 581 295 67 36 chr10 136221967 136222191 -9367097 - MIR SINE MIR 0 262 32 343 276 114 24 chr10 136222828 136222951 -9366337 - L1ME LINE L1 -5933 137 4 360 0 0 0 chr10 136223002 136223042 -9366246 + (CA)n Simple_repeat Simple_repeat 2 41 0 297 75 0 0 chr10 136223224 136223264 -9366024 + (A)n Simple_repeat Simple_repeat 1 40 0 465 269 109 13 chr10 136223823 136223979 -9365309 + MLT1H LTR MaLR 30 200 -349 257 221 168 44 chr10 136224099 136224212 -9365076 + MLT1F LTR MaLR 416 542 0 355 173 111 40 chr10 136224236 136224360 -9364928 - L1ME LINE L1 -302 5819 5674 723 250 110 26 chr10 136224540 136224768 -9364520 + MIR SINE MIR 12 258 -4 558 206 61 47 chr10 136224810 136225025 -9364263 - MER58 DNA MER1_type 0 2420 1 2181 105 0 10 chr10 136225432 136225746 -9363542 + AluSx SINE Alu 1 311 -1 1502 153 79 114 chr10 136227070 136227387 -9361901 + MLT1A1 LTR MaLR 1 304 -61 2008 123 3 13 chr10 136227387 136227697 -9361591 + AluSx SINE Alu 1 307 -5 1502 153 79 114 chr10 136227697 136227757 -9361531 + MLT1A1 LTR MaLR 304 365 0 946 249 95 53 chr10 136227822 136228367 -9360921 - L1M4 LINE L1 -1299 4847 4280 2140 249 73 26 chr10 136229001 136229930 -9359358 - L1ME3 LINE L1 -142 6020 5041 476 221 34 20 chr10 136229930 136230079 -9359209 - MER113 DNA MER1_type? -365 156 6 210 71 0 0 chr10 136231745 136231773 -9357515 + (ATG)n Simple_repeat Simple_repeat 3 30 0 2306 99 3 0 chr10 136233717 136234029 -9355259 + AluSq SINE Alu 1 313 0 2103 90 3 10 chr10 136234970 136235269 -9354019 - AluSx SINE Alu -15 297 1 212 250 0 0 chr10 136236841 136236889 -9352399 + (TCTG)n Simple_repeat Simple_repeat 3 50 0 222 352 91 23 chr10 136238999 136239175 -9350113 - MIR SINE MIR -32 230 43 1503 224 110 18 chr10 136239663 136240119 -9349169 - MLT1D LTR MaLR 0 505 8 285 331 65 22 chr10 136241131 136241270 -9348018 + MIR SINE MIR 29 173 -89 199 268 18 0 chr10 136241300 136241356 -9347932 + L2 LINE L2 2698 2754 -560 259 128 26 0 chr10 136242081 136242120 -9347168 - MLT1D LTR MaLR -110 395 356 184 300 78 11 chr10 136242508 136242598 -9346690 + MIR SINE MIR 52 147 -61 212 265 0 0 chr10 136242703 136242752 -9346536 - L2 LINE L2 0 3272 3224 319 313 136 30 chr10 136242849 136243047 -9346241 - MIR SINE MIR -39 223 5 2232 103 0 0 chr10 136244638 136244938 -9344350 + AluSx SINE Alu 1 300 -12 340 310 61 9 chr10 136246942 136247105 -9342183 + MIR SINE MIR 32 203 -59 303 227 82 52 chr10 136247105 136247202 -9342086 + L1MC4 LINE L1 6615 6714 -1328 2105 99 0 0 chr10 136247598 136247906 -9341382 - AluSx SINE Alu 0 308 1 204 294 59 12 chr10 136247956 136248041 -9341247 - L2 LINE L2 -11 3261 3173 1031 269 148 42 chr10 136248043 136248179 -9341109 - L2 LINE L2 -7 3306 3186 2421 112 97 5 chr10 136248179 136248571 -9340717 - MSTA LTR MaLR 0 428 1 1031 269 148 42 chr10 136248571 136249239 -9340049 - L2 LINE L2 -127 3186 2432 1504 214 26 101 chr10 136249337 136249744 -9339544 - MLT1C LTR MaLR 0 467 102 2125 111 0 0 chr10 136249744 136250042 -9339246 - AluY SINE Alu -13 298 1 1504 214 26 101 chr10 136250042 136250129 -9339159 - MLT1C LTR MaLR -365 102 10 411 253 27 104 chr10 136250154 136250375 -9338913 - L2 LINE L2 -199 3073 2870 717 267 48 0 chr10 136250400 136250610 -9338678 + L1ME3 LINE L1 5368 5587 -577 339 218 46 23 chr10 136250612 136250699 -9338589 - Tigger7 DNA MER2_type -1 2486 2398 2792 162 52 16 chr10 136250699 136251204 -9338084 - Tigger7 DNA MER2_type -1964 523 1 1622 263 70 11 chr10 136251206 136251735 -9337553 + L1ME3 LINE L1 5589 6148 -14 378 286 64 58 chr10 136251804 136251817 -9337471 + HAL1b LINE L1 765 776 -572 1921 91 102 0 chr10 136251817 136252092 -9337196 + AluSq SINE Alu 1 303 -10 378 286 64 58 chr10 136252092 136252249 -9337039 + HAL1b LINE L1 776 936 -412 30 0 0 0 chr10 136253027 136253057 -9336231 + AT_rich Low_complexity Low_complexity 1 30 0 212 349 0 0 chr10 136253710 136253773 -9335515 + L2 LINE L2 3210 3272 0 1752 225 127 112 chr10 136253934 136253985 -9335303 - HAL1 LINE L1 -120 2387 2338 2123 119 0 3 chr10 136253985 136254287 -9335001 - AluSx SINE Alu -11 301 1 1752 225 127 112 chr10 136254287 136254942 -9334346 - HAL1 LINE L1 -169 2338 1695 3221 148 31 8 chr10 136254942 136255454 -9333834 + MER1A DNA MER1_type 4 527 0 1752 225 127 112 chr10 136255454 136256215 -9333073 - HAL1 LINE L1 -812 1695 896 398 218 104 90 chr10 136256214 136256425 -9332863 - HAL1 LINE L1 -1876 631 418 * 1100 133 22 6 chr10 136256445 136256626 -9332662 - AluSg/x SINE Alu -12 300 117 310 352 108 39 chr10 136256626 136256958 -9332330 - HAL1 LINE L1 -2149 358 4 962 35 0 0 chr10 136257982 136258098 -9331190 + AluY SINE Alu 186 301 -10 776 203 0 0 chr10 136258280 136258413 -9330875 + FLAM_A SINE Alu 1 133 0 206 327 141 45 chr10 136258621 136258777 -9330511 + L2 LINE L2 3102 3272 0 1961 157 40 10 chr10 136259796 136260191 -9329097 + L1MB3 LINE L1 5777 6183 0 266 306 48 27 chr10 136261933 136262080 -9327208 + L2 LINE L2 3161 3310 -3 382 246 92 28 chr10 136262291 136262433 -9326855 + MIR SINE MIR 109 259 -3 1835 139 27 0 chr10 136263057 136263351 -9325937 - AluSx SINE Alu -10 302 1 384 223 89 36 chr10 136263420 136263532 -9325756 - L2 LINE L2 -19 3294 3177 26 30 0 0 chr10 136263785 136263818 -9325470 + AT_rich Low_complexity Low_complexity 1 33 0 2579 128 14 43 chr10 136266410 136266855 -9322433 - MSTB1 LTR MaLR 0 432 1 432 271 97 7 chr10 136266856 136267011 -9322277 + L2 LINE L2 2794 2962 -352 802 258 77 0 chr10 136267390 136267611 -9321677 + MIR SINE MIR 10 247 -15 1286 145 66 137 chr10 136268376 136268686 -9320602 - MLT1A1 LTR MaLR 0 365 87 2168 123 3 0 chr10 136268686 136268978 -9320310 - AluSp SINE Alu -20 293 1 1286 145 66 137 chr10 136268978 136269060 -9320228 - MLT1A1 LTR MaLR -278 87 1 1011 186 56 26 chr10 136269264 136269495 -9319793 - ORSL DNA AcHobo -1 274 37 204 127 73 18 chr10 136269526 136269581 -9319707 + C-rich Low_complexity Low_complexity 2 59 0 1246 222 137 34 chr10 136269586 136270023 -9319265 + MLT1D LTR MaLR 21 502 -3 297 0 0 0 chr10 136270613 136270646 -9318642 + (CA)n Simple_repeat Simple_repeat 2 34 0 207 0 0 0 chr10 136270645 136270668 -9318620 + (GA)n Simple_repeat Simple_repeat 2 24 0 * 301 316 77 46 chr10 136271289 136272004 -9317284 - L1M4 LINE L1 -923 5223 4487 374 145 0 0 chr10 136272056 136272115 -9317173 + Alu SINE Alu 1 53 -249 265 136 0 0 chr10 136272100 136272144 -9317144 + Alu SINE Alu 259 302 -6 * 2720 230 34 39 chr10 136272171 136272841 -9316447 - L1MC/D LINE L1 -621 5621 4949 2427 93 64 6 chr10 136272841 136273185 -9316103 - THE1B LTR MaLR 0 364 1 2720 230 34 39 chr10 136273185 136273326 -9315962 - L1MC/D LINE L1 -1293 4949 4809 1765 182 3 23 chr10 136273326 136273633 -9315655 - AluJb SINE Alu -7 305 5 2720 230 34 39 chr10 136273633 136274116 -9315172 - L1MC/D LINE L1 -1433 4809 4341 617 224 98 6 chr10 136275318 136275492 -9313796 + MIR SINE MIR 66 255 -7 228 279 12 12 chr10 136276811 136276897 -9312391 - MIR SINE MIR -171 91 6 23 0 0 0 chr10 136277537 136277560 -9311728 + AT_rich Low_complexity Low_complexity 1 23 0 1591 250 68 78 chr10 136277561 136278449 -9310839 - HAL1 LINE L1 -30 2477 1599 843 178 0 6 chr10 136278468 136278625 -9310663 - L1MB8 LINE L1 -1 6177 6022 198 0 0 0 chr10 136278765 136278787 -9310501 + (TTA)n Simple_repeat Simple_repeat 2 23 0 274 285 100 43 chr10 136278912 136279193 -9310095 + L2 LINE L2 3016 3312 -1 909 190 88 29 chr10 136279670 136279875 -9309413 - MER20 DNA MER1_type -2 217 1 2015 208 41 12 chr10 136280506 136280997 -9308291 + MLT1D LTR MaLR 1 505 0 3524 76 0 5 chr10 136281272 136281718 -9307570 - MLT2A1 LTR ERVL 0 444 1 29176 64 7 3 chr10 136281718 136285273 -9304015 - HERVL-A1 LTR ERVL 0 5654 2087 10982 64 7 12 chr10 136285267 136286468 -9302820 - HERVL-A1 LTR ERVL -4271 1383 190 * 1991 157 0 3 chr10 136286468 136286761 -9302527 - AluSx SINE Alu -18 294 3 10982 64 7 12 chr10 136286761 136286950 -9302338 - HERVL-A1 LTR ERVL -5464 190 1 3503 76 0 5 chr10 136286950 136287396 -9301892 - MLT2A1 LTR ERVL 0 444 1 1992 128 38 61 chr10 136288599 136288942 -9300346 - MER1B DNA MER1_type 0 337 3 930 288 65 54 chr10 136289135 136290066 -9299222 - L1ME3 LINE L1 -232 5930 4983 2416 48 0 0 chr10 136290066 136290356 -9298932 + L1PA5 LINE L1 5865 6154 0 930 288 65 54 chr10 136290356 136290745 -9298543 - L1ME3 LINE L1 -1179 4983 4600 558 105 84 32 chr10 136290955 136291050 -9298238 + FLAM_C SINE Alu 11 110 -33 207 244 0 0 chr10 136291058 136291099 -9298189 + CT-rich Low_complexity Low_complexity 2 42 0 2194 62 39 32 chr10 136291100 136291409 -9297879 - AluY SINE Alu 0 311 1 630 205 55 0 chr10 136291456 136291583 -9297705 + AluJo SINE Alu 2 135 -177 2129 161 45 32 chr10 136291599 136292145 -9297143 + MLT2A2 LTR ERVL 1 553 -1 1051 158 12 0 chr10 136292145 136292316 -9296972 + AluJo SINE Alu 136 308 -4 198 296 0 19 chr10 136292504 136292558 -9296730 - MIR SINE MIR -209 53 1 2250 101 10 0 chr10 136292580 136292868 -9296420 - AluSp SINE Alu -22 291 1 317 321 30 24 chr10 136293234 136293399 -9295889 + MIR3 SINE MIR 1 166 -42 2045 204 79 90 chr10 136294406 136294902 -9294386 - L1ME2 LINE L1 -13 6151 5651 2244 125 0 0 chr10 136294902 136295199 -9294089 - AluSg SINE Alu -13 297 1 2045 204 79 90 chr10 136295199 136296031 -9293257 - L1ME2 LINE L1 -513 5651 4618 325 326 8 0 chr10 136297405 136297537 -9291751 + MIR SINE MIR 67 199 -63 1328 90 0 0 chr10 136297688 136297854 -9291434 - AluSg/x SINE Alu -10 300 135 321 98 0 0 chr10 136297854 136297895 -9291393 - Alu SINE Alu -263 45 5 1011 177 23 84 chr10 136300254 136300386 -9288902 - MER58A DNA MER1_type -2199 221 105 2030 125 7 0 chr10 136300386 136300665 -9288623 + AluSx SINE Alu 31 311 -1 1011 177 23 84 chr10 136300665 136300747 -9288541 - MER58A DNA MER1_type -2315 105 20 795 240 14 10 chr10 136300775 136300983 -9288305 + MER3 DNA MER1_type 1 209 0 212 338 49 29 chr10 136301806 136302010 -9287278 + L2 LINE L2 2994 3201 -71 2285 108 0 0 chr10 136302947 136303244 -9286044 + AluSg SINE Alu 1 297 -13 479 266 53 16 chr10 136303354 136303542 -9285746 + MER117 DNA MER1_type 3 197 0 181 304 22 11 chr10 136303544 136303636 -9285652 - MIR3 SINE MIR -50 158 66 545 119 46 0 chr10 136304480 136304590 -9284698 + L1P4 LINE L1 5373 5496 -665 425 316 36 21 chr10 136304667 136304860 -9284428 - MIR SINE MIR -47 215 20 335 244 115 83 chr10 136304908 136304977 -9284311 + MIR SINE MIR 81 146 -116 2301 98 0 3 chr10 136304977 136305273 -9284015 + AluY SINE Alu 1 295 -16 335 244 115 83 chr10 136305273 136305359 -9283929 + MIR SINE MIR 146 241 -21 303 229 133 0 chr10 136305394 136305499 -9283789 - MIR SINE MIR -27 235 117 461 290 46 46 chr10 136306099 136306316 -9282972 + MIR SINE MIR 46 262 0 2893 173 46 31 chr10 136306324 136306937 -9282351 + L1MB8 LINE L1 5557 6178 0 494 236 36 67 chr10 136306962 136307004 -9282284 - MER31-int LTR ERV1 -1134 3802 3760 2661 108 45 35 chr10 136307004 136307052 -9282236 - MSTA LTR MaLR 0 428 382 1726 170 0 7 chr10 136307052 136307363 -9281925 + AluJo SINE Alu 11 319 0 2661 108 45 35 chr10 136307363 136307737 -9281551 - MSTA LTR MaLR -46 382 1 494 236 36 67 chr10 136307737 136307859 -9281429 - MER31-int LTR ERV1 -1176 3760 3643 268 184 0 0 chr10 136307960 136308009 -9281279 + Charlie1 DNA MER1_type 57 105 -2656 370 241 17 63 chr10 136308042 136308080 -9281208 + Charlie1 DNA MER1_type 2596 2634 -127 5254 73 46 1 chr10 136308080 136308793 -9280495 + L1PA13 LINE L1 5416 6160 -3 370 241 17 63 chr10 136308793 136308928 -9280360 + Charlie1 DNA MER1_type 2634 2761 0 362 240 40 40 chr10 136309226 136309401 -9279887 - MER31-int LTR ERV1 -3064 1872 1698 1476 141 10 72 chr10 136309409 136309557 -9279731 - Tigger1 DNA MER2_type -63 2355 2232 2197 118 3 0 chr10 136309557 136309853 -9279435 + AluSx SINE Alu 1 297 -15 1476 141 10 72 chr10 136309853 136309995 -9279293 - Tigger1 DNA MER2_type -186 2232 2083 12610 126 15 3 chr10 136309995 136311847 -9277441 - Tigger1 DNA MER2_type -543 1875 1 348 236 47 27 chr10 136311982 136312130 -9277158 - MER31-int LTR ERV1 -3495 1441 1291 2138 126 0 3 chr10 136312232 136312534 -9276754 - AluSx SINE Alu -11 301 1 564 307 50 11 chr10 136312853 136313207 -9276081 + LTR16C LTR ERVL 107 454 -3 1181 240 125 3 chr10 136313369 136313656 -9275632 + MER21B LTR ERV1 19 340 -523 1567 110 140 19 chr10 136313981 136314281 -9275007 + AluSc SINE Alu 1 296 -3 559 155 0 19 chr10 136314146 136314226 -9275062 + AluSg/x SINE Alu 200 288 -21 246 27 54 0 chr10 136314226 136314263 -9275025 + (CAAA)n Simple_repeat Simple_repeat 1 180 0 559 155 0 19 chr10 136314263 136314285 -9275003 + AluSg/x SINE Alu 288 309 0 2152 192 73 58 chr10 136314652 136315082 -9274206 + MER89 LTR ERV1 1 442 -117 1667 171 0 23 chr10 136315082 136315386 -9273902 - AluJo SINE Alu -15 297 1 2152 192 73 58 chr10 136315386 136315506 -9273782 + MER89 LTR ERV1 442 559 0 368 306 24 24 chr10 136315519 136315643 -9273645 + MIR3 SINE MIR 52 175 -33 186 279 10 96 chr10 136315802 136315906 -9273382 - MIR SINE MIR -59 203 109 191 316 21 63 chr10 136316618 136316713 -9272575 - L2 LINE L2 -338 2976 2886 197 341 12 24 chr10 136317150 136317235 -9272053 - MIR SINE MIR -113 149 66 296 279 130 19 chr10 136317339 136317500 -9271788 - LTR16C LTR ERVL 0 491 313 446 282 8 16 chr10 136317976 136318100 -9271188 - L2 LINE L2 0 3313 3191 2187 95 0 3 chr10 136319420 136319716 -9269572 - AluSx SINE Alu -17 295 1 1170 279 66 46 chr10 136321888 136322448 -9266840 - MLT1K LTR MaLR -7 581 11 204 309 0 0 chr10 136322451 136322506 -9266782 + L2 LINE L2 3160 3214 -58 218 304 0 0 chr10 136323074 136323130 -9266158 - L2 LINE L2 -57 3215 3160 327 293 171 0 chr10 136324314 136324495 -9264793 + MIR SINE MIR 42 253 -9 538 198 0 0 chr10 136325236 136325332 -9263956 - FLAM_A SINE Alu -25 117 22 193 375 83 42 chr10 136325579 136325723 -9263565 + MIR SINE MIR 13 162 -100 812 209 47 47 chr10 136325723 136325957 -9263331 - L1ME1 LINE L1 -944 5202 4969 * 2766 224 22 17 chr10 136325930 136326647 -9262641 + L1ME1 LINE L1 5214 5942 -224 759 266 147 9 chr10 136326678 136326998 -9262290 + MLT1G1 LTR MaLR 224 587 -8 589 344 53 28 chr10 136327013 136327336 -9261952 - MLT1K LTR MaLR -254 334 4 246 326 0 11 chr10 136327429 136327518 -9261770 + MIR SINE MIR 175 262 0 192 70 70 0 chr10 136327922 136327965 -9261323 + (TG)n Simple_repeat Simple_repeat 2 47 0 316 331 104 18 chr10 136328458 136328621 -9260667 - L2 LINE L2 -15 3298 3122 1666 276 150 18 chr10 136329293 136330345 -9258943 + L2 LINE L2 2130 3313 0 806 309 87 42 chr10 136330724 136331446 -9257842 + L1MEd LINE L1 706 1460 -4912 244 251 82 100 chr10 136331493 136331772 -9257516 + L1MEd LINE L1 1405 1678 -4706 582 174 132 84 chr10 136331790 136331902 -9257386 + MER96 DNA MER1_type? 1 125 -50 2692 104 6 6 chr10 136331902 136332266 -9257022 + THE1B LTR MaLR 1 364 0 582 174 132 84 chr10 136332266 136332320 -9256968 + MER96 DNA MER1_type? 125 175 0 219 36 0 0 chr10 136332875 136332903 -9256385 + (TTG)n Simple_repeat Simple_repeat 2 29 0 303 355 58 0 chr10 136332925 136333046 -9256242 + L2 LINE L2 3179 3306 -7 3169 157 20 31 chr10 136333141 136333684 -9255604 + MLT2B3 LTR ERVL 4 540 -14 249 326 0 70 chr10 136333705 136333791 -9255497 - L2 LINE L2 -43 3229 3150 384 231 126 50 chr10 136333798 136333997 -9255291 + MER112 DNA MER1_type 47 260 0 1591 205 73 7 chr10 136334025 136334449 -9254839 - Charlie4a DNA MER1_type -56 452 1 1795 164 0 3 chr10 136334492 136334785 -9254503 - AluJb SINE Alu -20 292 1 1895 161 108 8 chr10 136335809 136336170 -9253118 + MLT2C1 LTR ERVL 1 397 0 194 105 26 0 chr10 136336238 136336276 -9253012 + (CA)n Simple_repeat Simple_repeat 2 40 0 249 290 231 16 chr10 136336584 136336956 -9252332 + L2 LINE L2 1994 2445 -869 1866 198 5 27 chr10 136337258 136337631 -9251657 - MLT1A1 LTR MaLR 0 365 1 342 310 85 8 chr10 136337645 136337774 -9251514 - L2 LINE L2 -444 2870 2732 242 207 81 35 chr10 136337823 136337910 -9251378 - MER5B DNA MER1_type -82 96 6 322 352 23 23 chr10 136337920 136338096 -9251192 - L3 LINE CR1 -49 1528 1353 311 261 0 0 chr10 136339851 136339916 -9249372 - L2 LINE L2 -5 3267 3203 446 288 68 28 chr10 136340342 136340519 -9248769 - MIR SINE MIR -46 216 33 332 302 47 41 chr10 136342027 136342199 -9247089 - MER5B DNA MER1_type -3 175 3 1633 232 66 17 chr10 136343189 136343290 -9245998 + Charlie4a DNA MER1_type 2 97 -1864 1965 118 11 0 chr10 136343290 136343602 -9245686 + AluSp SINE Alu 1 315 0 1633 232 66 17 chr10 136343602 136343982 -9245306 + Charlie4a DNA MER1_type 97 508 0 355 264 47 9 chr10 136344169 136344275 -9245013 - L1ME1 LINE L1 -16 6150 6041 1705 83 0 0 chr10 136344277 136344493 -9244795 + AluSp SINE Alu 1 216 -97 309 253 13 0 chr10 136344949 136345028 -9244260 - L1M4 LINE L1 -1802 4344 4265 517 288 92 25 chr10 136345067 136345634 -9243654 - L1MEd LINE L1 -3429 2700 2096 446 172 32 21 chr10 136345841 136345934 -9243354 + MIR SINE MIR 111 204 -58 320 261 0 11 chr10 136345934 136346026 -9243262 + (TATATG)n Simple_repeat Simple_repeat 2 92 0 3401 160 44 8 chr10 136346054 136346643 -9242645 - Tigger7 DNA MER2_type -1875 612 3 354 289 23 80 chr10 136346719 136346982 -9242306 - L1MEd LINE L1 -5311 808 561 318 26 0 0 chr10 136347149 136347188 -9242100 + (TTG)n Simple_repeat Simple_repeat 2 40 0 21 57 0 0 chr10 136348202 136348237 -9241051 + AT_rich Low_complexity Low_complexity 1 35 0 540 304 82 29 chr10 136348409 136348607 -9240681 - MIR SINE MIR -2 260 45 1958 127 72 36 chr10 136348607 136348969 -9240319 + THE1C LTR MaLR 1 375 0 540 304 82 29 chr10 136348969 136349013 -9240275 - MIR SINE MIR -217 45 5 221 322 34 0 chr10 136349071 136349130 -9240158 - MIR SINE MIR -150 112 52 798 278 126 19 chr10 136349236 136349754 -9239534 + L1ME3A LINE L1 1542 2114 -4282 1502 257 45 7 chr10 136349845 136350308 -9238980 + L1ME3A LINE L1 2719 3199 -3016 42 20 0 0 chr10 136350311 136350360 -9238928 + AT_rich Low_complexity Low_complexity 1 49 0 203 179 0 0 chr10 136350681 136350720 -9238568 + A-rich Low_complexity Low_complexity 1 39 0 2855 264 67 30 chr10 136350722 136351581 -9237707 + L1ME3A LINE L1 4087 4913 -1326 2075 108 3 10 chr10 136351581 136351888 -9237400 + AluSc SINE Alu 1 305 -4 2855 264 67 30 chr10 136351888 136352130 -9237158 + L1ME3A LINE L1 4913 5145 -1094 1526 124 120 48 chr10 136352130 136352421 -9236867 + AluJb SINE Alu 1 312 0 2855 264 67 30 chr10 136352421 136353091 -9236197 + L1ME3A LINE L1 5145 5921 -318 531 292 41 69 chr10 136353995 136354098 -9235190 - L2 LINE L2 -727 2587 2483 2532 127 8 3 chr10 136354098 136354460 -9234828 - THE1B LTR MaLR 0 364 1 531 292 41 69 chr10 136354460 136354746 -9234542 - L2 LINE L2 -831 2483 2209 204 67 0 0 chr10 136355493 136355523 -9233765 + (A)n Simple_repeat Simple_repeat 1 30 0 584 310 41 25 chr10 136356036 136356278 -9233010 - MIR SINE MIR -5 257 12 183 80 0 0 chr10 136357270 136357295 -9231993 + (T)n Simple_repeat Simple_repeat 1 25 0 1294 151 68 93 chr10 136357657 136357968 -9231320 + AluJb SINE Alu 1 303 -9 259 265 31 0 chr10 136357987 136358085 -9231203 - L1ME4a LINE L1 -1 6120 6020 256 298 43 68 chr10 136359183 136359344 -9229944 - L1ME4a LINE L1 -369 5752 5596 909 146 6 39 chr10 136360291 136360469 -9228819 + L1MB2 LINE L1 5998 6169 -2 1964 120 3 0 chr10 136360475 136360759 -9228529 + AluSx SINE Alu 1 285 -27 387 60 0 0 chr10 136360760 136360810 -9228478 + (CA)n Simple_repeat Simple_repeat 2 51 0 2419 58 3 0 chr10 136362054 136362362 -9226926 - AluY SINE Alu -2 309 1 404 188 54 0 chr10 136363711 136363812 -9225476 + MLT1C LTR MaLR 8 123 -267 1493 226 67 32 chr10 136363812 136364146 -9225142 + MLT1C LTR MaLR 51 403 -64 1868 80 8 15 chr10 136364146 136364408 -9224880 - AluSp SINE Alu -48 265 6 1493 226 67 32 chr10 136364408 136364475 -9224813 + MLT1C LTR MaLR 403 466 -1 231 114 0 0 chr10 136364702 136364737 -9224551 + (TTCA)n Simple_repeat Simple_repeat 4 38 0 192 307 188 10 chr10 136364741 136364842 -9224446 - L2 LINE L2 -14 3258 3140 1067 215 53 26 chr10 136364957 136365259 -9224029 + LTR10A LTR ERV1 1 310 -299 2302 113 38 19 chr10 136365279 136365399 -9223889 + LTR10A LTR ERV1 178 294 -315 2282 91 0 3 chr10 136365399 136365708 -9223580 - AluY SINE Alu -3 308 1 2302 113 38 19 chr10 136365708 136365958 -9223330 + LTR10A LTR ERV1 294 555 -54 617 226 7 0 chr10 136366662 136366799 -9222489 - L1MB5 LINE L1 0 6174 6037 2138 149 174 42 chr10 136366819 136367238 -9222050 - LTR36 LTR ERV1 -7 604 101 2214 103 3 3 chr10 136367238 136367548 -9221740 - AluSx SINE Alu -2 310 1 2138 149 174 42 chr10 136367548 136367651 -9221637 - LTR36 LTR ERV1 -510 101 13 244 205 115 0 chr10 136367663 136367741 -9221547 - L1MB5 LINE L1 -157 6017 5931 339 78 0 3 chr10 136367971 136368157 -9221131 + AluSq SINE Alu 60 297 -6 2868 144 71 15 chr10 136368461 136369009 -9220279 - LTR59 LTR ERV1 -18 579 1 290 344 55 39 chr10 136369235 136369363 -9219925 + L2 LINE L2 3123 3252 -20 21 0 0 0 chr10 136369528 136369549 -9219739 + AT_rich Low_complexity Low_complexity 1 21 0 2339 66 3 3 chr10 136369613 136369914 -9219374 + AluY SINE Alu 1 301 -10 516 191 19 9 chr10 136369993 136370098 -9219190 + MER81 DNA DNA 2 107 -7 710 281 100 38 chr10 136370156 136370310 -9218978 + L3 LINE CR1 1113 1256 -321 2354 91 45 96 chr10 136370310 136370707 -9218581 - MER51B LTR ERV1 0 377 1 710 281 100 38 chr10 136370707 136370872 -9218416 + L3 LINE CR1 1256 1452 -125 1682 219 103 16 chr10 136371111 136371536 -9217752 - MLT1C LTR MaLR -5 462 1 333 248 36 80 chr10 136371757 136371894 -9217394 - MLT1K LTR MaLR 0 588 458 4229 125 8 5 chr10 136372180 136372813 -9216475 - MER41B LTR ERV1 0 635 1 189 203 391 0 chr10 136373791 136373860 -9215428 - MER5A DNA MER1_type -81 108 13 243 0 0 0 chr10 136374783 136374810 -9214478 + (GGAA)n Simple_repeat Simple_repeat 4 30 0 514 250 57 34 chr10 136374940 136375116 -9214172 - MIR SINE MIR -70 192 13 342 286 41 10 chr10 136375762 136375860 -9213428 - MIR SINE MIR -57 205 105 609 316 0 17 chr10 136375893 136376067 -9213221 + MER5B DNA MER1_type 8 178 0 190 293 104 38 chr10 136377577 136377683 -9211605 + L2 LINE L2 3122 3234 -79 222 231 0 39 chr10 136377923 136377975 -9211313 + C-rich Low_complexity Low_complexity 4 53 0 675 0 0 0 chr10 136377975 136378050 -9211238 + (TTTCC)n Simple_repeat Simple_repeat 4 78 0 1442 179 41 0 chr10 136378053 136378321 -9210967 - AluJb SINE Alu -33 279 1 259 234 243 0 chr10 136378566 136378671 -9210617 - MIR SINE MIR -66 142 30 301 297 103 30 chr10 136379156 136379321 -9209967 - MIR3 SINE MIR -12 196 20 820 161 0 29 chr10 136379427 136379564 -9209724 + AluJb SINE Alu 2 134 -178 218 317 140 5 chr10 136380094 136380280 -9209008 - MIR SINE MIR -16 246 36 2211 105 0 6 chr10 136380295 136380610 -9208678 - AluSq SINE Alu 0 313 1 369 0 0 0 chr10 136382108 136382149 -9207139 + (CA)n Simple_repeat Simple_repeat 1 41 0 182 161 54 89 chr10 136382261 136382317 -9206971 + L2 LINE L2 3168 3221 -92 365 295 62 40 chr10 136382349 136382573 -9206715 - MLT1K LTR MaLR -4 584 356 303 225 0 25 chr10 136382641 136382721 -9206567 + MLT1C LTR MaLR 390 467 0 243 274 36 12 chr10 136382721 136382805 -9206483 - MIR SINE MIR -119 143 58 451 324 126 11 chr10 136383537 136383901 -9205387 - L1ME LINE L1 -331 5790 5385 339 211 269 11 chr10 136384110 136384285 -9205003 - L1ME4a LINE L1 -25 6096 5877 260 276 52 67 chr10 136384329 136384463 -9204825 - L1MC4 LINE L1 -294 7748 7617 1796 159 31 0 chr10 136384556 136384990 -9204298 - AluSq SINE Alu 0 443 1 190 273 45 76 chr10 136385799 136385865 -9203423 + MIR SINE MIR 107 170 -92 193 335 211 27 chr10 136386670 136386855 -9202433 - L2 LINE L2 -93 3179 2961 2202 90 0 0 chr10 136387021 136387311 -9201977 - AluY SINE Alu -21 290 1 332 267 78 17 chr10 136387463 136387579 -9201709 + MIR SINE MIR 23 145 -63 228 245 224 0 chr10 136388444 136388542 -9200746 - MIR SINE MIR -70 192 73 2715 182 25 14 chr10 136389715 136390356 -9198932 - L1MB7 LINE L1 -326 5858 5208 21 0 0 0 chr10 136390517 136390538 -9198750 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr10 136390608 136390634 -9198654 + AT_rich Low_complexity Low_complexity 1 26 0 423 322 45 11 chr10 136391262 136391439 -9197849 - MIR SINE MIR -57 205 23 283 355 75 67 chr10 136393300 136393658 -9195630 - L2 LINE L2 -15 3257 2897 182 302 35 81 chr10 136395464 136395550 -9193738 + L2 LINE L2 3232 3313 0 236 100 25 0 chr10 136395950 136395990 -9193298 + (TTC)n Simple_repeat Simple_repeat 2 42 0 274 224 0 0 chr10 136396159 136396208 -9193080 - L2 LINE L2 -24 3248 3200 453 247 0 0 chr10 136396571 136396660 -9192628 + MIR SINE MIR 62 150 -112 200 289 77 29 chr10 136398261 136398365 -9190923 + MIR3 SINE MIR 93 201 -7 264 320 78 8 chr10 136398653 136398781 -9190507 - L1ME4a LINE L1 -285 5877 5741 * 3090 145 12 0 chr10 136398778 136399276 -9190012 - L1P LINE L1 -1683 4463 3960 4277 64 2 0 chr10 136399283 136399818 -9189470 + L1PA12 LINE L1 5618 6153 -15 528 242 39 43 chr10 136400076 136400332 -9188956 - L1MEc LINE L1 -3644 2571 2317 38 51 0 0 chr10 136400775 136400834 -9188454 + AT_rich Low_complexity Low_complexity 1 59 0 2244 108 0 0 chr10 136401738 136402044 -9187244 + AluSq SINE Alu 1 306 -7 751 311 66 31 chr10 136402125 136402486 -9186802 - L1MEc LINE L1 -4619 1777 1385 378 0 0 0 chr10 136402486 136402528 -9186760 + (TG)n Simple_repeat Simple_repeat 2 43 0 751 311 66 31 chr10 136402528 136402776 -9186512 - L1MEc LINE L1 -5011 1385 1147 * 1602 277 58 7 chr10 136402773 136403458 -9185830 + L1ME2 LINE L1 2840 3559 -2587 1598 215 61 49 chr10 136403466 136404020 -9185268 + L1ME2 LINE L1 4642 5202 -944 1916 130 0 11 chr10 136404023 136404307 -9184981 + AluSq SINE Alu 1 281 -32 568 101 22 0 chr10 136404307 136404396 -9184892 + (GAAA)n Simple_repeat Simple_repeat 1 91 0 3000 225 45 29 chr10 136404439 136405400 -9183888 + L1ME2 LINE L1 5175 6155 -9 342 303 53 33 chr10 136405434 136405586 -9183702 - MIR SINE MIR -105 157 3 213 212 230 53 chr10 136405761 136405874 -9183414 - MIR SINE MIR -110 152 20 300 128 0 0 chr10 136405937 136405984 -9183304 + MLT1B LTR MaLR 340 386 -4 624 234 132 76 chr10 136406466 136406876 -9182412 + L1MC5 LINE L1 7225 7657 -304 244 318 0 0 chr10 136408140 136408228 -9181060 + (CAT)n Simple_repeat Simple_repeat 3 90 0 300 259 148 15 chr10 136409624 136409759 -9179529 + LTR67 LTR ERVL 351 503 -54 188 279 58 35 chr10 136409793 136409879 -9179409 - MIR3 SINE MIR -116 92 5 320 296 113 52 chr10 136409927 136410157 -9179131 - L2 LINE L2 0 3313 3070 2277 114 3 7 chr10 136411168 136411474 -9177814 + AluSq SINE Alu 1 305 -8 427 292 80 55 chr10 136411505 136411969 -9177319 + MLT1G1 LTR MaLR 76 592 -3 542 97 0 105 chr10 136412011 136412053 -9177235 - L1MB3 LINE L1 -2 6181 6136 1435 181 211 7 chr10 136412053 136412121 -9177167 - MLT1A1 LTR MaLR 0 365 312 2052 131 0 39 chr10 136412121 136412426 -9176862 + AluSq SINE Alu 1 293 -20 1435 181 211 7 chr10 136412426 136412660 -9176628 - MLT1A1 LTR MaLR -53 312 1 542 97 0 105 chr10 136412660 136412731 -9176557 - L1MB3 LINE L1 -47 6136 6080 202 310 169 7 chr10 136413859 136414001 -9175287 + MIR SINE MIR 80 244 -18 519 196 0 0 chr10 136414131 136414223 -9175065 - FRAM SINE Alu -17 159 68 719 150 67 33 chr10 136416124 136416304 -9172984 - L1MB7 LINE L1 0 6184 5999 205 357 30 20 chr10 136416650 136416749 -9172539 - MIR SINE MIR -107 101 3 * 388 330 98 0 chr10 136416749 136416921 -9172367 + L3 LINE CR1 1380 1568 -9 432 242 0 0 chr10 136416957 136417048 -9172240 + MER81 DNA DNA 2 92 -22 350 220 10 0 chr10 136417237 136417337 -9171951 + (ATGGTG)n Simple_repeat Simple_repeat 4 104 0 182 229 14 0 chr10 136417359 136417429 -9171859 + (ATG)n Simple_repeat Simple_repeat 2 72 0 709 234 96 10 chr10 136417430 136417627 -9171661 - MIR SINE MIR -13 249 36 243 0 0 0 chr10 136417645 136417672 -9171616 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2052 196 36 34 chr10 136417746 136418245 -9171043 - MLT1D LTR MaLR -4 501 2 243 305 62 31 chr10 136418581 136418709 -9170579 + L2 LINE L2 3181 3312 -1 239 0 32 0 chr10 136418901 136418932 -9170356 + (CAA)n Simple_repeat Simple_repeat 2 33 0 453 286 77 47 chr10 136418957 136419395 -9169893 + L1MCb LINE L1 265 650 -5772 * 1880 235 116 13 chr10 136419380 136419916 -9169372 + L1ME1 LINE L1 5567 6157 -9 318 91 0 0 chr10 136420043 136420087 -9169201 + MER41A LTR ERV1 511 554 0 277 321 113 40 chr10 136420278 136420552 -9168736 + L2 LINE L2 2487 2780 -534 295 333 0 0 chr10 136421776 136421857 -9167431 + GA-rich Low_complexity Low_complexity 4 84 0 2332 76 3 14 chr10 136421858 136422147 -9167141 + AluY SINE Alu 3 288 -23 190 312 58 71 chr10 136422534 136422688 -9166600 + MER5B DNA MER1_type 1 152 -26 1375 158 26 30 chr10 136422696 136422958 -9166330 - MSTC LTR MaLR -4 424 164 1456 213 83 50 chr10 136422958 136423515 -9165773 - LTR24B LTR ERV1 0 635 7 2391 90 3 3 chr10 136423517 136423816 -9165472 - AluSx SINE Alu -13 299 1 1117 98 25 0 chr10 136423860 136424023 -9165265 - MSTC LTR MaLR -261 167 1 190 309 18 0 chr10 136424031 136424086 -9165202 - MIR3 SINE MIR -37 171 116 214 229 36 12 chr10 136424362 136424445 -9164843 + (TAGA)n Simple_repeat Simple_repeat 4 88 0 567 199 244 0 chr10 136425443 136425574 -9163714 - MER5A DNA MER1_type -14 175 13 181 350 187 8 chr10 136425711 136425834 -9163454 + L2 LINE L2 3127 3271 -1 10699 177 50 13 chr10 136426059 136426318 -9162970 + L1MC3 LINE L1 5413 5661 -2124 2131 142 0 0 chr10 136426318 136426621 -9162667 - AluSx SINE Alu -9 303 1 10699 177 50 13 chr10 136426621 136428639 -9160649 + L1MC3 LINE L1 5661 7774 -11 229 364 29 21 chr10 136429218 136429358 -9159930 + MIR3 SINE MIR 1 141 -67 526 148 30 22 chr10 136429358 136429493 -9159795 + GA-rich Low_complexity Low_complexity 3 138 0 2236 113 0 13 chr10 136429594 136429904 -9159384 + AluSq SINE Alu 1 306 -7 1061 183 30 22 chr10 136430110 136430340 -9158948 + MLT1E3 LTR MaLR 392 623 -1 626 211 67 10 chr10 136433085 136433293 -9155995 + MER106A DNA MER1_type 5 224 -12 2749 213 54 37 chr10 136433513 136434084 -9155204 - L1ME1 LINE L1 -5 6161 5572 2462 77 3 10 chr10 136434084 136434394 -9154894 - AluY SINE Alu -3 308 1 2749 213 54 37 chr10 136434394 136434578 -9154710 - L1ME1 LINE L1 -594 5572 5393 2020 102 0 0 chr10 136434770 136435026 -9154262 + AluSq SINE Alu 50 305 -8 1433 233 50 47 chr10 136435032 136435979 -9153309 - L1ME1 LINE L1 -874 5272 4400 522 171 144 12 chr10 136435982 136436109 -9153179 + MSTD LTR MaLR 1 137 -259 2555 256 41 17 chr10 136436109 136436232 -9153056 - L1ME1 LINE L1 -1777 4369 4250 1593 166 152 23 chr10 136436232 136436581 -9152707 + MSTD LTR MaLR 1 394 -2 2555 256 41 17 chr10 136436581 136437343 -9151945 - L1ME1 LINE L1 -1896 4250 3463 428 113 0 41 chr10 136437345 136437442 -9151846 - L1ME1 LINE L1 -2915 3231 3139 1247 219 0 17 chr10 136437448 136437681 -9151607 + MER8 DNA MER2_type 1 229 -10 1037 219 46 6 chr10 136437696 136438020 -9151268 - L1ME1 LINE L1 -3018 3128 2792 * 3774 247 43 30 chr10 136438018 136439142 -9150146 + L1MEc LINE L1 35 1178 -5218 2424 88 0 0 chr10 136439142 136439437 -9149851 - AluSc SINE Alu -14 295 1 3774 247 43 30 chr10 136439437 136439532 -9149756 + L1MEc LINE L1 1178 1270 -5126 211 299 91 0 chr10 136440123 136440200 -9149088 - MER91A DNA MER1_type -1 195 112 251 364 16 8 chr10 136440206 136440327 -9148961 - MER91A DNA MER1_type -54 142 21 604 320 74 27 chr10 136440624 136440789 -9148499 + L1MC4a LINE L1 5414 5570 -2238 192 40 0 0 chr10 136440789 136440814 -9148474 + (TA)n Simple_repeat Simple_repeat 2 26 0 604 320 74 27 chr10 136440814 136441123 -9148165 + L1MC4a LINE L1 5570 5910 -1898 378 42 0 0 chr10 136441168 136441216 -9148072 + (TG)n Simple_repeat Simple_repeat 2 49 0 2422 106 3 0 chr10 136441813 136442124 -9147164 - AluSp SINE Alu -1 312 1 287 254 136 8 chr10 136442952 136443070 -9146218 + MIR3 SINE MIR 1 133 -75 236 108 0 0 chr10 136444058 136444095 -9145193 - L2 LINE L2 -214 3058 3022 863 282 10 10 chr10 136445426 136445635 -9143653 + MIR SINE MIR 23 231 -31 309 267 0 0 chr10 136446197 136446272 -9143016 - MIR SINE MIR -73 135 61 255 283 0 0 chr10 136446971 136447070 -9142218 + (CA)n Simple_repeat Simple_repeat 1 99 0 447 231 126 0 chr10 136447234 136447377 -9141911 + MIR SINE MIR 90 250 -12 249 182 0 0 chr10 136447772 136447827 -9141461 + (TG)n Simple_repeat Simple_repeat 2 56 0 233 204 148 93 chr10 136448799 136448907 -9140381 + MIR SINE MIR 79 192 -70 681 238 55 45 chr10 136449323 136449538 -9139750 + MLT1D LTR MaLR 1 185 -320 2108 186 90 0 chr10 136449639 136450027 -9139261 - MSTB LTR MaLR -1 425 3 1017 236 58 49 chr10 136450421 136450765 -9138523 - MLT1H1 LTR MaLR -3 552 206 330 195 234 0 chr10 136450789 136450866 -9138422 - MER58A DNA MER1_type -12 95 1 264 122 0 0 chr10 136451167 136451208 -9138080 + (TG)n Simple_repeat Simple_repeat 2 42 0 507 343 58 54 chr10 136451829 136452275 -9137013 + L2 LINE L2 2825 3272 0 548 241 158 67 chr10 136452728 136453114 -9136174 + MLT1J2 LTR MaLR 1 421 -29 405 267 69 0 chr10 136453289 136453405 -9135883 - MIR SINE MIR -65 143 20 2378 219 37 3 chr10 136453727 136454299 -9134989 - L1MD3 LINE L1 -1 7994 7404 263 254 0 0 chr10 136454299 136454354 -9134934 - MLT1H1 LTR MaLR -442 125 71 474 282 5 58 chr10 136455071 136455259 -9134029 - MER5B DNA MER1_type 0 178 1 197 244 178 0 chr10 136455262 136455352 -9133936 + MER5A DNA MER1_type 4 109 -80 245 271 47 35 chr10 136455747 136455832 -9133456 + MIR SINE MIR 89 174 -88 227 170 43 21 chr10 136456615 136456709 -9132579 + (TTG)n Simple_repeat Simple_repeat 1 96 0 290 275 44 79 chr10 136456905 136457141 -9132147 - MIR SINE MIR -35 227 2 296 283 76 35 chr10 136458824 136458969 -9130319 - MER5A DNA MER1_type -35 154 4 319 267 44 0 chr10 136459023 136459113 -9130175 - MER5A DNA MER1_type -83 106 13 1294 220 92 45 chr10 136459662 136460107 -9129181 - MLT1C LTR MaLR 0 467 2 500 204 37 0 chr10 136460435 136460543 -9128745 - MIR SINE MIR -66 142 31 2411 93 3 0 chr10 136462003 136462304 -9126984 - AluSp SINE Alu -6 307 6 297 256 88 22 chr10 136462307 136462444 -9126844 - L1ME3 LINE L1 -273 5889 5744 407 238 76 43 chr10 136462986 136463171 -9126117 + L1ME3 LINE L1 5756 5946 -216 312 280 112 0 chr10 136463359 136463484 -9125804 + MIR SINE MIR 45 183 -79 235 152 22 0 chr10 136463558 136463604 -9125684 - MLT2B2 LTR ERVL 0 515 469 920 183 0 0 chr10 136463608 136463761 -9125527 - Tigger2 DNA MER2_type -2 2716 2564 2026 121 83 63 chr10 136463802 136464321 -9124967 + MLT2A2 LTR ERVL 1 554 0 2009 155 0 16 chr10 136464338 136464647 -9124641 - AluJb SINE Alu -8 304 1 853 165 0 12 chr10 136464647 136464811 -9124477 - Tigger2 DNA MER2_type -2555 163 2 * 2234 176 36 50 chr10 136464811 136465287 -9124001 - MLT2B2 LTR ERVL -46 469 1 741 251 86 25 chr10 136466413 136466864 -9122424 - L2 LINE L2 -117 3196 2717 647 244 98 108 chr10 136466961 136467379 -9121909 - MLT2D LTR ERVL 0 414 1 431 250 11 11 chr10 136467398 136467490 -9121798 + MIR SINE MIR 55 146 -116 423 218 75 128 chr10 136467490 136467678 -9121610 + MER45A DNA AcHobo 1 178 0 300 299 0 0 chr10 136467682 136467769 -9121519 + MIR SINE MIR 144 230 -32 541 297 153 25 chr10 136468497 136469053 -9120235 + L2 LINE L2 2639 3275 -38 235 326 108 0 chr10 136469073 136469165 -9120123 - MIR3 SINE MIR -68 140 37 714 236 59 25 chr10 136469165 136469368 -9119920 + MER63A DNA MER1_type 1 210 0 235 326 108 0 chr10 136469368 136469406 -9119882 - MIR3 SINE MIR -171 37 4 221 191 0 0 chr10 136469545 136469587 -9119701 + MIR SINE MIR 97 138 -70 267 259 98 18 chr10 136470744 136470856 -9118432 + MIR3 SINE MIR 45 165 -43 310 284 11 32 chr10 136473410 136473505 -9115783 + MIR SINE MIR 49 141 -67 21 57 0 0 chr10 136474327 136474362 -9114926 + AT_rich Low_complexity Low_complexity 1 35 0 400 186 8 110 chr10 136474431 136474549 -9114739 + MER21B LTR ERV1 1 106 -757 2295 230 86 57 chr10 136474571 136475366 -9113922 + MER21B LTR ERV1 25 842 -21 431 258 74 67 chr10 136475383 136475457 -9113831 - L1MC4 LINE L1 -236 7806 7734 2388 102 51 20 chr10 136475457 136475810 -9113478 - THE1B LTR MaLR 0 364 1 431 258 74 67 chr10 136475810 136475850 -9113438 - L1MC4 LINE L1 -308 7734 7696 2796 10 0 3 chr10 136475850 136476153 -9113135 - AluY SINE Alu -8 303 2 431 258 74 67 chr10 136476153 136476424 -9112864 - L1MC4 LINE L1 -346 7696 7318 304 244 148 24 chr10 136476528 136476737 -9112551 - L1MC4 LINE L1 -722 7320 7086 1210 132 20 0 chr10 136477211 136477415 -9111873 + MER20 DNA MER1_type 4 211 -8 352 282 68 68 chr10 136478375 136478407 -9110881 - L1ME4a LINE L1 -2 6119 6088 2293 158 15 23 chr10 136478407 136478806 -9110482 - MSTD LTR MaLR 0 396 1 352 282 68 68 chr10 136478806 136478936 -9110352 - L1ME4a LINE L1 -32 6089 5957 467 202 88 52 chr10 136479092 136479285 -9110003 - L1MDa LINE L1 -4565 1975 1776 * 1322 224 75 64 chr10 136479261 136479327 -9109961 - L1MDa LINE L1 -5054 1489 1425 2299 157 21 30 chr10 136479327 136479760 -9109528 + MSTB1 LTR MaLR 1 429 -3 1322 224 75 64 chr10 136479760 136480268 -9109020 - L1MDa LINE L1 -5118 1425 909 331 348 123 20 chr10 136480296 136480500 -9108788 - L1MDa LINE L1 -5566 964 740 278 311 80 62 chr10 136480829 136481118 -9108170 - L1MDa LINE L1 -6206 334 41 266 263 145 22 chr10 136481141 136481320 -9107968 - L1ME4a LINE L1 -299 5822 5622 482 250 57 21 chr10 136481476 136481616 -9107672 + L2 LINE L2 3165 3309 -4 191 279 0 0 chr10 136481724 136481767 -9107521 + L2 LINE L2 3217 3259 -13 1111 171 0 0 chr10 136482510 136482674 -9106614 + FRAM SINE Alu 1 163 -13 245 308 171 0 chr10 136482758 136482875 -9106413 - L2 LINE L2 -11 3261 3125 790 269 162 80 chr10 136483720 136483874 -9105414 - L2 LINE L2 -61 3252 3112 2057 135 13 0 chr10 136483874 136484177 -9105111 - AluSx SINE Alu -5 307 1 790 269 162 80 chr10 136484177 136485296 -9103992 - L2 LINE L2 -201 3112 1874 225 230 23 35 chr10 136485718 136485805 -9103483 + CT-rich Low_complexity Low_complexity 3 88 0 24 32 0 0 chr10 136485851 136485882 -9103406 + AT_rich Low_complexity Low_complexity 1 31 0 203 323 0 0 chr10 136485932 136485997 -9103291 + (CATA)n Simple_repeat Simple_repeat 2 66 0 1007 132 30 128 chr10 136487085 136487350 -9101938 + MER50 LTR ERV1 2 240 -494 * 1459 153 40 22 chr10 136487333 136487607 -9101681 + MER50 LTR ERV1 433 711 -23 359 306 159 48 chr10 136488172 136488424 -9100864 + L2 LINE L2 2989 3268 -4 1684 166 62 100 chr10 136488477 136488959 -9100329 + MLT1C LTR MaLR 4 467 0 346 268 37 110 chr10 136490744 136490908 -9098380 - L1ME3 LINE L1 -17 6145 5994 234 314 85 5 chr10 136491411 136491599 -9097689 + L2 LINE L2 2459 2661 -653 270 231 19 9 chr10 136491654 136491762 -9097526 + CT-rich Low_complexity Low_complexity 3 111 0 204 244 0 22 chr10 136491830 136491875 -9097413 + L2 LINE L2 3143 3186 -86 249 242 65 0 chr10 136493373 136493435 -9095853 - MIR SINE MIR -98 164 99 294 27 0 0 chr10 136494511 136494548 -9094740 + tRNA-Cys-TGC tRNA tRNA 1 37 -38 222 273 15 45 chr10 136495020 136495086 -9094202 - L2 LINE L2 -16 3256 3193 627 244 119 0 chr10 136495143 136495336 -9093952 - MIR SINE MIR -38 224 9 184 330 100 0 chr10 136495427 136495527 -9093761 - L2 LINE L2 -208 3105 2996 349 304 36 9 chr10 136496218 136496330 -9092958 - L2 LINE L2 -5 3308 3194 257 319 104 12 chr10 136496540 136496703 -9092585 - L2 LINE L2 -163 3109 2932 1827 151 43 20 chr10 136496860 136497211 -9092077 + MLT1A1 LTR MaLR 7 365 0 458 310 29 17 chr10 136497211 136497385 -9091903 - MIR SINE MIR -29 233 58 1808 175 155 10 chr10 136497657 136498069 -9091219 - MER101 LTR ERV1 -2 472 1 405 0 0 0 chr10 136498188 136498233 -9091055 + (CA)n Simple_repeat Simple_repeat 2 46 0 552 294 64 42 chr10 136499017 136499321 -9089967 - L1ME3 LINE L1 -748 5398 5246 2089 138 0 0 chr10 136499321 136499612 -9089676 + AluSx SINE Alu 1 291 -21 552 294 64 42 chr10 136499612 136499932 -9089356 - L1ME3 LINE L1 -900 5246 4935 751 171 0 0 chr10 136500016 136500127 -9089161 - FLAM_C SINE Alu -31 112 2 408 264 7 109 chr10 136500198 136500603 -9088685 - L1ME3 LINE L1 -2200 3946 3592 2130 131 0 16 chr10 136500613 136500926 -9088362 + AluSq SINE Alu 1 308 -5 1259 181 4 31 chr10 136501003 136501230 -9088058 - AluJo SINE Alu -7 305 85 881 168 0 0 chr10 136501230 136501355 -9087933 - FAM SINE Alu -60 125 1 500 264 172 5 chr10 136501356 136501550 -9087738 - L1ME3 LINE L1 -2624 3522 3300 384 327 83 12 chr10 136502172 136502340 -9086948 + MIR SINE MIR 5 184 -78 236 161 129 0 chr10 136502342 136502404 -9086884 - LTR33 LTR ERVL -2 519 450 2281 116 7 0 chr10 136504239 136504549 -9084739 + AluSx SINE Alu 1 312 0 308 215 204 0 chr10 136505511 136505604 -9083684 + MIR SINE MIR 38 149 -59 373 252 77 49 chr10 136505614 136505757 -9083531 - MER5B DNA MER1_type -7 171 25 1527 214 93 56 chr10 136506535 136507085 -9082203 + MLT1E2 LTR MaLR 48 617 -9 262 323 138 6 chr10 136507457 136507624 -9081664 + MIR3 SINE MIR 4 192 -16 641 235 95 95 chr10 136707695 136708073 -8881215 - MLT1H LTR MaLR -53 496 119 267 299 150 12 chr10 136708373 136708540 -8880748 + MIR SINE MIR 1 190 -72 2156 87 27 10 chr10 136710290 136710588 -8878700 + AluSc SINE Alu 1 303 -6 1617 161 72 10 chr10 136710628 136710919 -8878369 - AluJb SINE Alu -3 309 1 256 226 0 0 chr10 136710919 136710986 -8878302 + MIR SINE MIR 58 125 -83 197 288 30 0 chr10 136711005 136711071 -8878217 + MIR SINE MIR 86 153 -55 423 198 72 0 chr10 136711073 136711184 -8878104 + L1ME3A LINE L1 5318 5436 -730 2183 119 0 44 chr10 136711186 136711506 -8877782 + AluSg SINE Alu 1 306 -4 627 284 133 15 chr10 136711507 136711567 -8877721 + L1ME3A LINE L1 5577 5629 -541 2092 109 40 10 chr10 136711567 136711871 -8877417 - AluSq SINE Alu 0 313 1 627 284 133 15 chr10 136711871 136712134 -8877154 + L1ME3A LINE L1 5629 5938 -232 222 250 40 13 chr10 136712976 136713052 -8876236 - L2 LINE L2 -2 3270 3193 2250 109 3 6 chr10 136715761 136716072 -8873216 - AluSg SINE Alu 0 310 1 529 226 29 72 chr10 136716167 136716284 -8873004 - MIR SINE MIR -3 259 153 2327 112 3 0 chr10 136716284 136716588 -8872700 - AluSq SINE Alu -8 305 1 529 226 29 72 chr10 136716588 136716678 -8872610 - MIR SINE MIR -109 153 61 201 244 0 0 chr10 136716714 136716755 -8872533 + (TG)n Simple_repeat Simple_repeat 1 41 0 2193 105 55 6 chr10 136717422 136717783 -8871505 - Tigger2 DNA MER2_type -67 2651 2273 1572 42 0 0 chr10 136718048 136718239 -8871049 - L1PA8 LINE L1 -13 6159 5969 2077 122 28 0 chr10 136718377 136718663 -8870625 + AluSx SINE Alu 1 294 -18 189 0 0 0 chr10 136719257 136719278 -8870010 + (TG)n Simple_repeat Simple_repeat 2 22 0 522 268 101 10 chr10 136719979 136720177 -8869111 + MIR SINE MIR 45 260 -2 240 317 139 34 chr10 136720261 136720469 -8868819 + L2 LINE L2 3029 3258 -55 2396 39 0 13 chr10 136721196 136721507 -8867781 - L1PA5 LINE L1 0 6154 5848 911 180 6 6 chr10 136721764 136721931 -8867357 + FRAM SINE Alu 1 167 -9 2092 111 11 0 chr10 136721935 136722240 -8867048 + AluSx SINE Alu 1 308 0 870 240 115 46 chr10 136722720 136722916 -8866372 + MER87 LTR ERV1 217 443 -98 2796 135 103 0 chr10 136722916 136723390 -8865898 + MER1A DNA MER1_type 1 523 -4 870 240 115 46 chr10 136723390 136723497 -8865791 + MER87 LTR ERV1 443 541 0 * 1082 241 85 17 chr10 136723497 136723848 -8865440 + MLT1D LTR MaLR 131 505 0 319 273 39 26 chr10 136724582 136724736 -8864552 + MIR SINE MIR 73 228 -34 2336 111 0 0 chr10 136726675 136726973 -8862315 + AluSx SINE Alu 5 302 -10 1347 220 90 9 chr10 136727078 136727424 -8861864 + MLT1A2 LTR MaLR 1 374 0 2000 124 112 47 chr10 136727618 136728020 -8861268 - MSTA LTR MaLR 0 428 1 812 194 24 0 chr10 136728100 136728270 -8861018 - L1M4 LINE L1 -1222 4924 4751 1463 85 5 5 chr10 136728270 136728459 -8860829 - AluSx SINE Alu -11 299 111 415 121 61 0 chr10 136728530 136728596 -8860692 - AluSx SINE Alu -211 101 32 243 215 46 0 chr10 136729841 136729906 -8859382 - MIR SINE MIR -108 154 87 304 258 19 13 chr10 136730761 136730866 -8858422 + MIR SINE MIR 55 159 -67 391 225 202 23 chr10 136732627 136732800 -8856488 - MLT1J2 LTR MaLR -3 447 244 180 125 0 0 chr10 136733946 136733978 -8855310 + (A)n Simple_repeat Simple_repeat 1 32 0 918 316 49 41 chr10 136735012 136735689 -8853599 + HAL1 LINE L1 1087 1768 -739 1109 201 0 9 chr10 136735932 136736151 -8853137 + AluJo SINE Alu 96 312 0 1999 226 91 17 chr10 136736655 136737258 -8852030 - MER114 LTR ERV 0 648 1 1382 160 0 31 chr10 136737281 136737506 -8851782 - AluJo SINE Alu -94 218 1 809 269 25 49 chr10 136737724 136737969 -8851319 - MLT1F1 LTR MaLR -2 565 327 2056 148 17 0 chr10 136738015 136738360 -8850928 - MLT1B LTR MaLR 0 390 40 488 230 171 72 chr10 136738370 136738605 -8850683 - MLT1F1 LTR MaLR -286 268 3 303 222 6 23 chr10 136738918 136739089 -8850199 + (CA)n Simple_repeat Simple_repeat 2 169 0 462 225 22 44 chr10 136739646 136739712 -8849576 - L1M4 LINE L1 -1470 4676 4610 2000 101 10 29 chr10 136739712 136740020 -8849268 + AluSc SINE Alu 1 302 -7 462 225 22 44 chr10 136740020 136740135 -8849153 - L1M4 LINE L1 -1536 4610 4499 981 76 0 111 chr10 136740144 136740316 -8848972 - MSTB1 LTR MaLR -250 182 30 1699 236 26 29 chr10 136740318 136740904 -8848384 - L1M4 LINE L1 -1654 4492 3909 2046 167 10 37 chr10 136740915 136741123 -8848165 - MLT1B LTR MaLR 0 390 178 1140 175 111 44 chr10 136741123 136741253 -8848035 + MLT1A1 LTR MaLR 1 121 -244 1959 161 20 0 chr10 136741253 136741557 -8847731 + AluJo SINE Alu 1 310 -2 1140 175 111 44 chr10 136741557 136741768 -8847520 + MLT1A1 LTR MaLR 121 365 0 2046 167 10 37 chr10 136741768 136741789 -8847499 - MLT1B LTR MaLR -212 178 158 2322 133 11 11 chr10 136741789 136742164 -8847124 + THE1C LTR MaLR 1 375 0 2046 167 10 37 chr10 136742164 136742334 -8846954 - MLT1B LTR MaLR -232 158 1 2506 259 35 11 chr10 136742334 136743179 -8846109 - L1M4 LINE L1 -2244 3902 3037 689 300 39 17 chr10 136743176 136743533 -8845755 - L1MEc LINE L1 -5453 943 579 * 745 326 40 50 chr10 136743565 136744141 -8845147 - L1MEc LINE L1 -5810 586 17 401 276 157 40 chr10 136744115 136744587 -8844701 - L1MEc LINE L1 -1310 1266 1065 * 387 0 0 0 chr10 136744587 136744630 -8844658 + (CA)n Simple_repeat Simple_repeat 1 43 0 401 276 157 40 chr10 136744630 136744826 -8844462 - L1MEc LINE L1 -1511 1065 893 834 324 100 27 chr10 136744849 136745259 -8844029 - L1MEc LINE L1 -5473 646 207 1524 237 108 10 chr10 136745390 136745808 -8843480 - MLT1C LTR MaLR 0 467 9 225 0 0 0 chr10 136746120 136746145 -8843143 + (TGGG)n Simple_repeat Simple_repeat 1 25 0 508 232 99 70 chr10 136748292 136748564 -8840724 - MLT1K LTR MaLR -27 561 282 1156 191 16 0 chr10 136748567 136748813 -8840475 + L1MB7 LINE L1 5581 5830 -354 1876 150 33 13 chr10 136748864 136749170 -8840118 - AluJb SINE Alu 0 312 1 483 331 53 47 chr10 136750780 136751100 -8838188 - L2 LINE L2 -36 3236 2915 374 247 54 97 chr10 136752267 136752420 -8836868 + L1ME4a LINE L1 5784 5942 -179 2582 102 17 7 chr10 136752420 136752609 -8836679 + L1MA1 LINE L1 5879 6065 -237 2517 84 0 0 chr10 136752609 136752920 -8836368 + AluSx SINE Alu 1 311 -1 2582 102 17 7 chr10 136752920 136753150 -8836138 + L1MA1 LINE L1 6065 6302 0 374 247 54 97 chr10 136753150 136753348 -8835940 + L1ME4a LINE L1 5942 6120 -1 790 249 113 54 chr10 136753496 136753905 -8835383 + MLT1K LTR MaLR 123 555 -33 709 212 73 6 chr10 136754192 136754371 -8834917 + MIR SINE MIR 40 230 -32 289 295 70 33 chr10 136754928 136755172 -8834116 + L1M4 LINE L1 2936 3188 -2958 2033 115 3 61 chr10 136755239 136755552 -8833736 - AluSx SINE Alu -17 295 1 275 273 26 45 chr10 136755576 136755730 -8833558 + L1M4 LINE L1 3336 3486 -2660 258 378 18 4 chr10 136755728 136755953 -8833335 + L1M4 LINE L1 4235 4462 -1684 * 311 285 39 39 chr10 136756069 136756199 -8833089 + L1M4 LINE L1 4578 4707 -1439 1792 176 21 0 chr10 136756836 136757126 -8832162 + AluJb SINE Alu 1 296 -16 961 189 0 0 chr10 136757126 136757298 -8831990 + AluJb SINE Alu 137 308 0 694 194 8 0 chr10 136757305 136757429 -8831859 + FLAM_C SINE Alu 3 127 -16 188 155 12 60 chr10 136757604 136757629 -8831659 + (TATAA)n Simple_repeat Simple_repeat 5 30 -54 2665 109 48 10 chr10 136757629 136758041 -8831247 + MSTA LTR MaLR 1 428 0 188 155 12 60 chr10 136758041 136758099 -8831189 + (TATAA)n Simple_repeat Simple_repeat 30 84 0 2313 107 3 19 chr10 136758170 136758488 -8830800 + AluSq SINE Alu 1 313 0 241 35 0 0 chr10 136758515 136758544 -8830744 + (TTTTA)n Simple_repeat Simple_repeat 2 170 0 1611 173 0 40 chr10 136758544 136758838 -8830450 - AluJo SINE Alu -5 307 1 677 279 5 9 chr10 136759005 136759227 -8830061 + AluSg/x SINE Alu 82 302 -10 332 331 73 17 chr10 136759230 136759621 -8829667 + L1P4 LINE L1 5164 5576 -589 844 156 0 0 chr10 136759845 136759967 -8829321 - FLAM_C SINE Alu -19 124 3 2107 70 44 7 chr10 136759969 136760262 -8829026 - AluSg SINE Alu 0 303 1 264 323 12 12 chr10 136760278 136760445 -8828843 + L1ME3A LINE L1 5781 5947 -223 234 299 26 0 chr10 136761624 136761701 -8827587 + GA-rich Low_complexity Low_complexity 3 81 0 767 274 75 12 chr10 136762623 136762864 -8826424 + L2 LINE L2 2077 2332 -982 1176 60 0 0 chr10 136762866 136763017 -8826271 + L1PA7 LINE L1 6000 6150 -4 382 119 0 14 chr10 136763019 136763088 -8826200 + MLT1H LTR MaLR 481 548 0 * 1711 233 70 101 chr10 136763088 136763689 -8825599 - MLT1G LTR MaLR -13 577 1 506 269 141 0 chr10 136763695 136763851 -8825437 - MIR SINE MIR -70 192 15 2030 96 0 36 chr10 136764283 136764563 -8824725 + AluSx SINE Alu 5 274 -38 216 86 0 0 chr10 136764563 136764598 -8824690 + (TCTG)n Simple_repeat Simple_repeat 2 36 0 414 85 0 0 chr10 136764713 136764772 -8824516 + (CA)n Simple_repeat Simple_repeat 2 60 0 362 243 127 11 chr10 136764772 136764884 -8824404 + L1MC4 LINE L1 1965 6983 -1339 299 264 35 0 chr10 136765236 136765323 -8823965 - MER53 DNA DNA -1 188 99 * 316 225 25 0 chr10 136765247 136765327 -8823961 + MER53 DNA DNA 23 104 -85 1636 215 94 133 chr10 136765327 136765622 -8823666 - L1ME3A LINE L1 -37 6133 5828 498 85 11 43 chr10 136765622 136765716 -8823572 + MER53 DNA DNA 96 186 -3 1636 215 94 133 chr10 136765716 136766166 -8823122 - L1ME3A LINE L1 -342 5828 5331 534 219 57 0 chr10 136766166 136766289 -8822999 - FLAM_A SINE Alu -2 131 2 1636 215 94 133 chr10 136766289 136766399 -8822889 - L1ME3A LINE L1 -839 5331 5218 2332 123 13 8 chr10 136767326 136767699 -8821589 - THE1C LTR MaLR 0 375 1 31 26 0 0 chr10 136767966 136768004 -8821284 + AT_rich Low_complexity Low_complexity 1 38 0 314 203 31 0 chr10 136768276 136768340 -8820948 + L2 LINE L2 2741 2806 -508 550 234 34 17 chr10 136768465 136768640 -8820648 - MER45A DNA AcHobo 0 178 1 219 265 65 0 chr10 136768693 136768809 -8820479 - MIR SINE MIR -73 135 9 332 225 0 42 chr10 136768809 136768951 -8820337 + CT-rich Low_complexity Low_complexity 2 137 0 646 111 0 0 chr10 136770116 136770206 -8819082 - FLAM_C SINE Alu -40 103 14 254 280 86 27 chr10 136770236 136770424 -8818864 - MIR SINE MIR -27 235 32 189 242 45 15 chr10 136770478 136770544 -8818744 + MIR3 SINE MIR 12 79 -129 2258 169 45 24 chr10 136770655 136770721 -8818567 + MLT1D LTR MaLR 2 65 -440 2638 96 3 3 chr10 136770721 136771084 -8818204 + THE1B LTR MaLR 2 364 0 2258 169 45 24 chr10 136771084 136771509 -8817779 + MLT1D LTR MaLR 65 503 -2 422 209 73 9 chr10 136772742 136772852 -8816436 - LTR16C LTR ERVL 0 491 375 396 147 78 29 chr10 136772858 136772960 -8816328 + MLT1C LTR MaLR 7 113 -354 1877 80 11 4 chr10 136772964 136773226 -8816062 + THE1B LTR MaLR 1 264 -100 531 71 106 12 chr10 136773358 136773443 -8815845 + THE1B LTR MaLR 268 360 -4 * 538 216 45 106 chr10 136773441 136773686 -8815602 + MLT1C LTR MaLR 83 312 -155 991 269 82 80 chr10 136773806 136774353 -8814935 + LTR67 LTR ERVL 5 552 -5 201 297 143 11 chr10 136774515 136774606 -8814682 + MIR SINE MIR 13 115 -147 707 303 70 7 chr10 136775303 136775603 -8813685 - L1ME4a LINE L1 -215 5906 5588 402 281 168 0 chr10 136775701 136775868 -8813420 - MIR SINE MIR -8 254 60 2407 88 7 3 chr10 136777301 136777608 -8811680 + AluSq SINE Alu 1 308 -5 186 203 85 0 chr10 136778898 136778957 -8810331 + L2 LINE L2 3151 3214 -58 238 336 28 9 chr10 136778972 136779079 -8810209 + MIR SINE MIR 117 225 -37 722 177 0 8 chr10 136779274 136779404 -8809884 + FLAM_A SINE Alu 13 141 -1 408 40 0 0 chr10 136779406 136779456 -8809832 + (GGGA)n Simple_repeat Simple_repeat 3 52 0 246 210 74 0 chr10 136780023 136780104 -8809184 + L1ME4a LINE L1 6022 6108 -13 278 292 11 39 chr10 136781259 136781437 -8807851 + C-rich Low_complexity Low_complexity 2 174 0 253 294 18 24 chr10 136781448 136781618 -8807670 + CT-rich Low_complexity Low_complexity 5 173 0 317 242 0 77 chr10 136781686 136781880 -8807408 + CT-rich Low_complexity Low_complexity 1 179 0 229 304 0 0 chr10 136783124 136783180 -8806108 - MER5A DNA MER1_type 0 189 134 1292 182 45 105 chr10 136783188 136783318 -8805970 + AluJo SINE Alu 1 137 -175 2310 112 0 7 chr10 136783318 136783622 -8805666 + AluSx SINE Alu 1 302 -10 2416 81 3 7 chr10 136783622 136783929 -8805359 - AluY SINE Alu -5 306 1 1292 182 45 105 chr10 136783929 136784110 -8805178 + AluJo SINE Alu 135 294 -18 2407 91 3 10 chr10 136784345 136784654 -8804634 + AluSq SINE Alu 1 307 -6 700 154 0 62 chr10 136785050 136785180 -8804108 - AluJ SINE Alu -8 304 183 1149 151 6 17 chr10 136785245 136785424 -8803864 - AluJ SINE Alu -126 186 10 410 173 112 0 chr10 136786720 136786835 -8802453 + MIR SINE MIR 64 192 -62 228 240 40 50 chr10 136788782 136788882 -8800406 - MIR SINE MIR -118 144 46 799 217 75 80 chr10 136788988 136789307 -8799981 + MER39 LTR ERV1 1 320 -387 2370 87 0 0 chr10 136789307 136789594 -8799694 + AluSq SINE Alu 1 287 -26 225 0 0 0 chr10 136789594 136789619 -8799669 + (CA)n Simple_repeat Simple_repeat 2 26 0 799 217 75 80 chr10 136789619 136789714 -8799574 + MER39 LTR ERV1 318 629 -78 218 246 0 14 chr10 136790534 136790603 -8798685 + C-rich Low_complexity Low_complexity 6 73 0 669 146 68 9 chr10 136791110 136791312 -8797976 + MER7A DNA MER2_type 47 337 0 188 244 192 13 chr10 136791319 136791397 -8797891 - MIR3 SINE MIR -50 158 67 298 241 305 0 chr10 136792436 136792577 -8796711 + MIR SINE MIR 76 259 -3 442 241 37 56 chr10 136792761 136792863 -8796425 - MER5B DNA MER1_type -17 161 62 2190 131 0 0 chr10 136792863 136793160 -8796128 - AluSq SINE Alu -16 297 1 442 241 37 56 chr10 136793160 136793219 -8796069 - MER5B DNA MER1_type -116 62 3 188 356 54 27 chr10 136793297 136793446 -8795842 + MIR3 SINE MIR 21 173 -35 856 237 112 24 chr10 136793618 136793994 -8795294 + LTR56 LTR ERV1 9 417 -28 2395 234 90 24 chr10 136793995 136794924 -8794364 - LTR28 LTR ERV1 -6 1014 1 257 297 55 39 chr10 136795126 136795254 -8794034 - MIR SINE MIR -9 253 124 2345 105 3 3 chr10 136795476 136795782 -8793506 - AluSp SINE Alu -7 306 1 1653 198 7 7 chr10 136796132 136796425 -8792863 + AluJb SINE Alu 1 293 -19 234 91 0 0 chr10 136796893 136796926 -8792362 + (A)n Simple_repeat Simple_repeat 1 33 0 2382 119 0 0 chr10 136797107 136797418 -8791870 + AluSx SINE Alu 2 312 0 2502 74 0 0 chr10 136797466 136797762 -8791526 + AluY SINE Alu 1 296 -15 2082 146 0 0 chr10 136797857 136798151 -8791137 + AluSx SINE Alu 1 294 -18 767 196 201 81 chr10 136798152 136798510 -8790778 + LTR56 LTR ERV1 45 445 0 2337 82 7 0 chr10 136799473 136799764 -8789524 + AluSc SINE Alu 1 293 -16 2181 104 0 58 chr10 136799979 136800306 -8788982 + AluSc SINE Alu 1 308 -1 565 190 56 101 chr10 136800438 136800580 -8788708 + MER5B DNA MER1_type 1 135 -43 2571 77 0 0 chr10 136800580 136800890 -8788398 - AluY SINE Alu -1 310 1 565 190 56 101 chr10 136800890 136800926 -8788362 + MER5B DNA MER1_type 135 171 -7 2266 113 0 0 chr10 136801413 136801713 -8787575 + AluSc SINE Alu 1 300 -9 2140 110 10 3 chr10 136801717 136802009 -8787279 + AluSg SINE Alu 1 294 -16 1872 132 18 0 chr10 136803151 136803294 -8785994 - AluSx SINE Alu -34 278 126 198 0 0 0 chr10 136803294 136803316 -8785972 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 1872 132 18 0 chr10 136803316 136803445 -8785843 - AluSx SINE Alu -186 126 1 1394 165 56 34 chr10 136805375 136805501 -8783787 - AluJo SINE Alu -40 272 150 2255 94 3 60 chr10 136805501 136805832 -8783456 - AluSx SINE Alu 0 312 1 1394 165 56 34 chr10 136805832 136805971 -8783317 - AluJo SINE Alu -162 150 1 2010 157 0 0 chr10 136806007 136806300 -8782988 + AluSx SINE Alu 1 293 -19 273 252 29 154 chr10 136807388 136807454 -8781834 - L2 LINE L2 -1 3312 3239 2092 130 7 0 chr10 136807454 136807767 -8781521 + AluSx SINE Alu 1 315 0 273 252 29 154 chr10 136807767 136807779 -8781509 - L2 LINE L2 -74 3239 3227 2154 97 48 0 chr10 136807779 136808069 -8781219 + AluSq SINE Alu 1 304 -9 273 252 29 154 chr10 136808069 136808234 -8781054 - L2 LINE L2 -86 3227 3098 252 0 0 0 chr10 136809493 136809532 -8779756 + (TG)n Simple_repeat Simple_repeat 1 67 0 252 0 0 0 chr10 136809532 136809560 -8779728 + (TG)n Simple_repeat Simple_repeat 2 29 0 898 115 0 43 chr10 136809580 136809719 -8779569 - FLAM_C SINE Alu 0 133 1 1455 165 60 8 chr10 136810516 136810825 -8778463 + AluJb SINE Alu 1 323 0 1486 156 51 5 chr10 136810839 136811205 -8778083 + L1M3 LINE L1 5169 5554 -626 769 159 40 0 chr10 136811406 136811557 -8777731 + L1MC4a LINE L1 7083 7239 -569 1189 182 90 98 chr10 136811562 136811759 -8777529 + L1MC4 LINE L1 7579 7776 -266 1722 173 32 0 chr10 136811759 136812037 -8777251 + AluJo SINE Alu 1 287 -25 1189 182 90 98 chr10 136812037 136812093 -8777195 + L1MC4 LINE L1 7776 7831 -211 2475 87 3 0 chr10 136812093 136812402 -8776886 + AluSx SINE Alu 1 310 -2 1189 182 90 98 chr10 136812402 136812614 -8776674 + L1MC4 LINE L1 7831 8041 -1 2499 97 0 0 chr10 136812770 136813079 -8776209 + AluSg SINE Alu 1 309 -1 1816 170 3 0 chr10 136813473 136813755 -8775533 + AluJo SINE Alu 13 295 -17 1250 147 163 52 chr10 136813756 136814008 -8775280 + AluJo SINE Alu 1 280 -32 183 129 0 0 chr10 136814008 136814039 -8775249 + (CAAT)n Simple_repeat Simple_repeat 2 32 0 421 206 0 0 chr10 136814258 136814331 -8774957 - AluJ/FLAM SINE Alu -238 74 2 459 113 0 0 chr10 136814474 136814545 -8774743 + (CA)n Simple_repeat Simple_repeat 2 72 0 2163 112 13 0 chr10 136814638 136814942 -8774346 + AluSp SINE Alu 1 308 -5 1784 156 16 25 chr10 136816034 136816349 -8772939 + AluJo SINE Alu 1 312 0 705 188 0 8 chr10 136816535 136816663 -8772625 - FLAM_A SINE Alu -7 135 9 306 287 168 3 chr10 136816922 136817060 -8772228 + MIR3 SINE MIR 37 197 -54 2366 82 20 7 chr10 136818522 136818825 -8770463 - AluSx SINE Alu -5 307 1 29 47 0 0 chr10 136820006 136820049 -8769239 + GC_rich Low_complexity Low_complexity 1 43 0 339 274 51 0 chr10 136820813 136820930 -8768358 - MIR3 SINE MIR -18 190 68 1769 144 8 4 chr10 136821089 136821352 -8767936 + AluJo SINE Alu 12 275 -37 186 43 0 0 chr10 136821357 136821380 -8767908 + (CAAT)n Simple_repeat Simple_repeat 2 24 0 490 242 81 7 chr10 136821574 136821723 -8767565 - LTR33 LTR ERVL -361 160 1 1098 111 0 0 chr10 136822611 136822755 -8766533 + AluSp SINE Alu 137 280 -33 1854 148 32 7 chr10 136822884 136823193 -8766095 - AluJb SINE Alu 0 316 1 872 128 0 74 chr10 136824026 136824174 -8765114 - FLAM_C SINE Alu -6 137 1 2087 99 4 7 chr10 136824249 136824522 -8764766 + AluSp SINE Alu 3 274 -39 1856 131 4 0 chr10 136824622 136824890 -8764398 + AluSp SINE Alu 42 310 -3 1347 185 67 67 chr10 136824902 136825155 -8764133 + LTR23 LTR ERV1 33 288 -149 2289 116 3 0 chr10 136825155 136825465 -8763823 + AluSx SINE Alu 1 311 -1 1347 185 67 67 chr10 136825465 136825616 -8763672 + LTR23 LTR ERV1 287 437 0 2422 107 0 0 chr10 136826282 136826591 -8762697 + AluSq SINE Alu 1 309 -4 2088 116 41 3 chr10 136826679 136826972 -8762316 + AluSx SINE Alu 1 304 -8 404 222 137 8 chr10 136827574 136827691 -8761597 + MER20B DNA MER1_type 367 498 -285 1830 156 30 23 chr10 136827708 136828010 -8761278 + AluSx SINE Alu 1 304 -8 1221 99 6 44 chr10 136828291 136828472 -8760816 - AluSg SINE Alu -136 174 1 1720 145 54 30 chr10 136828521 136828818 -8760470 + AluSx SINE Alu 1 304 -8 1952 138 3 38 chr10 136828895 136829214 -8760074 - AluJo SINE Alu -4 308 1 240 305 184 14 chr10 136829426 136829567 -8759721 + MIR SINE MIR 5 169 -39 1670 172 34 0 chr10 136829782 136830049 -8759239 + AluJb SINE Alu 2 277 -35 831 21 0 0 chr10 136830049 136830146 -8759142 + (GAGAA)n Simple_repeat Simple_repeat 3 99 0 180 111 0 0 chr10 136830568 136830595 -8758693 + (TTTTC)n Simple_repeat Simple_repeat 1 27 0 2275 109 3 3 chr10 136830657 136830970 -8758318 - AluSp SINE Alu 0 313 1 1543 140 91 0 chr10 136831245 136831488 -8757800 - AluSg SINE Alu -45 265 1 472 266 236 1 chr10 136831522 136831731 -8757557 - L1MC4a LINE L1 -413 5757 5598 200 205 0 0 chr10 136831775 136831814 -8757474 + MER5C DNA MER1_type 3 41 -283 226 103 162 29 chr10 136831894 136831962 -8757326 + MER5C DNA MER1_type 208 284 -40 1538 178 7 58 chr10 136831966 136832275 -8757013 - AluJo SINE Alu -19 293 1 1837 137 44 0 chr10 136832332 136832638 -8756650 + AluSq SINE Alu 3 320 0 698 160 0 0 chr10 136832695 136832795 -8756493 - FLAM_A SINE Alu -42 100 1 2145 125 0 0 chr10 136833326 136833613 -8755675 - AluSx SINE Alu -24 288 2 2071 131 17 3 chr10 136833781 136834072 -8755216 + AluSx SINE Alu 1 295 -17 2437 97 0 0 chr10 136834072 136834381 -8754907 + AluSc SINE Alu 1 309 0 3158 129 19 66 chr10 136834384 136834704 -8754584 + L1MA4 LINE L1 5727 6008 -292 2112 121 0 32 chr10 136834704 136835018 -8754270 + AluJb SINE Alu 1 304 -8 3158 129 19 66 chr10 136835018 136835288 -8754000 + L1MA4 LINE L1 6008 6289 -11 346 153 17 0 chr10 136835343 136835402 -8753886 + L2 LINE L2 3168 3227 -45 1180 187 0 9 chr10 136835563 136835777 -8753511 - AluSg/x SINE Alu -8 301 90 2229 118 3 0 chr10 136836206 136836502 -8752786 + AluSx SINE Alu 1 297 -15 2528 96 0 0 chr10 136836502 136836814 -8752474 + AluSx SINE Alu 1 312 0 743 117 14 97 chr10 136837164 136837309 -8751979 - AluJb SINE Alu -178 134 2 310 237 0 0 chr10 136837562 136837621 -8751667 + L2 LINE L2 3238 3296 -17 376 167 15 0 chr10 136837778 136837844 -8751444 + L2 LINE L2 3168 3234 -38 2201 130 13 0 chr10 136837870 136838169 -8751119 - AluSx SINE Alu -9 303 1 1042 152 37 0 chr10 136838223 136838414 -8750874 + L1MB5 LINE L1 5270 5467 -711 1715 137 84 28 chr10 136838416 136838701 -8750587 - AluJb SINE Alu -11 301 1 340 165 94 0 chr10 136838709 136838794 -8750494 - FLAM SINE Alu 0 133 41 1936 142 0 7 chr10 136838809 136839084 -8750204 - AluSx SINE Alu -39 273 1 2407 97 0 7 chr10 136839086 136839396 -8749892 - AluSx SINE Alu -4 308 1 2345 94 10 0 chr10 136840914 136841222 -8748066 + AluSq SINE Alu 1 311 -2 2501 186 13 2 chr10 136841222 136841700 -8747588 + L1MB5 LINE L1 5485 5967 -207 2210 105 0 7 chr10 136841700 136841995 -8747293 + AluSc SINE Alu 1 293 -16 695 207 79 0 chr10 136842009 136842173 -8747115 + AluJb SINE Alu 130 306 -6 2228 86 23 10 chr10 136842267 136842570 -8746718 + AluSc SINE Alu 1 307 -2 1645 168 68 10 chr10 136842610 136842902 -8746386 - AluJb SINE Alu -3 309 1 255 284 0 0 chr10 136842902 136842969 -8746319 + MIR SINE MIR 58 124 -138 229 266 53 32 chr10 136842960 136843054 -8746234 + MIR SINE MIR 58 153 -55 * 410 205 62 0 chr10 136843056 136843168 -8746120 + L1ME3A LINE L1 5318 5436 -730 2233 119 0 22 chr10 136843170 136843481 -8745807 + AluSg SINE Alu 1 304 -6 986 259 110 22 chr10 136843482 136843543 -8745745 + L1ME3A LINE L1 5577 5631 -539 2304 108 19 0 chr10 136843543 136843850 -8745438 - AluSq SINE Alu 0 313 1 986 259 110 22 chr10 136843850 136844189 -8745099 + L1ME3A LINE L1 5631 6012 -158 1883 167 13 13 chr10 136844208 136844520 -8744768 - AluJb SINE Alu 0 312 1 1848 149 17 10 chr10 136844836 136844963 -8744325 + AluJo SINE Alu 4 129 -183 2357 96 0 3 chr10 136844963 136845264 -8744024 + AluSq SINE Alu 1 300 -13 1848 149 17 10 chr10 136845264 136845431 -8743857 + AluJo SINE Alu 129 300 -12 313 183 56 0 chr10 136845431 136845502 -8743786 + L1MC4a LINE L1 7165 7239 -569 1229 207 87 83 chr10 136845512 136845897 -8743391 + L1MC4 LINE L1 7581 7963 -79 2158 106 0 3 chr10 136845897 136846209 -8743079 - AluSg SINE Alu 0 311 1 1229 207 87 83 chr10 136846209 136846242 -8743046 + L1MC4 LINE L1 7963 7994 -48 2129 90 0 0 chr10 136846242 136846533 -8742755 - AluSg SINE Alu 0 307 17 1229 207 87 83 chr10 136846533 136846570 -8742718 + L1MC4 LINE L1 7994 8041 -1 2115 112 18 7 chr10 136846936 136847221 -8742067 + AluSx SINE Alu 6 293 -19 742 164 16 0 chr10 136847268 136847390 -8741898 + AluJo SINE Alu 13 136 -176 1304 180 54 61 chr10 136847404 136847699 -8741589 + AluJb SINE Alu 1 293 -19 215 183 0 42 chr10 136850652 136850723 -8738565 + (CCGCG)n Simple_repeat Simple_repeat 1 68 0 185 283 0 0 chr10 136851383 136851429 -8737859 + L2 LINE L2 3268 3313 0 272 250 40 13 chr10 136852400 136852476 -8736812 + L2 LINE L2 3193 3270 -2 22 35 0 0 chr10 136853511 136853540 -8735748 + GC_rich Low_complexity Low_complexity 1 29 0 475 267 30 22 chr10 136853904 136854039 -8735249 - MIR3 SINE MIR -52 156 21 2253 107 7 7 chr10 136855208 136855507 -8733781 - AluSx SINE Alu -13 299 1 2023 125 0 72 chr10 136855970 136856146 -8733142 - AluSx SINE Alu -14 298 111 192 40 0 0 chr10 136856146 136856171 -8733117 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 2161 117 0 0 chr10 136856172 136856453 -8732835 - AluSx SINE Alu -31 281 1 2365 110 0 0 chr10 136856457 136856757 -8732531 - AluSg SINE Alu -10 300 1 2023 125 0 72 chr10 136856757 136856894 -8732394 - AluSx SINE Alu -204 108 1 198 0 0 0 chr10 136858222 136858244 -8731044 + (A)n Simple_repeat Simple_repeat 1 22 0 2311 119 0 0 chr10 136858484 136858796 -8730492 + AluSq SINE Alu 1 312 -1 900 215 6 6 chr10 136859821 136859984 -8729304 + FRAM SINE Alu 1 163 -3 300 53 0 0 chr10 136859984 136860022 -8729266 + (GGAA)n Simple_repeat Simple_repeat 1 38 0 731 245 85 69 chr10 136860105 136860488 -8728800 + MLT1F LTR MaLR 1 390 -200 723 124 0 0 chr10 136860512 136860625 -8728663 + (TTTC)n Simple_repeat Simple_repeat 4 116 0 * 879 160 0 0 chr10 136860514 136860670 -8728618 + CT-rich Low_complexity Low_complexity 1 156 0 1865 142 51 0 chr10 136860652 136860948 -8728340 - AluSx SINE Alu -1 311 1 758 205 22 81 chr10 136861191 136861308 -8727980 - FAM SINE Alu -137 174 70 2037 82 20 3 chr10 136861308 136861600 -8727688 - AluSg SINE Alu -13 297 1 758 205 22 81 chr10 136861600 136861667 -8727621 - FAM SINE Alu -241 70 1 489 248 51 65 chr10 136861918 136862056 -8727232 + MLT1K LTR MaLR 461 583 -5 671 276 66 46 chr10 136862214 136862600 -8726688 + MLT1J LTR MaLR 205 504 -7 180 230 0 135 chr10 136862693 136862724 -8726564 - MIR SINE MIR -62 146 129 2411 164 70 45 chr10 136862724 136863213 -8726075 - MLT1D LTR MaLR 0 505 5 180 230 0 135 chr10 136863213 136863255 -8726033 - MIR SINE MIR -79 129 83 2203 104 0 3 chr10 136864416 136864713 -8724575 - AluSx SINE Alu -16 296 1 840 142 0 15 chr10 136864732 136864866 -8724422 - FLAM_C SINE Alu 0 133 2 23 33 0 0 chr10 136865081 136865111 -8724177 + GC_rich Low_complexity Low_complexity 1 30 0 483 245 15 82 chr10 136865479 136865592 -8723696 + MER33 DNA MER1_type 2 98 -2487 1716 148 7 3 chr10 136865592 136865883 -8723405 + AluJo SINE Alu 1 292 -20 483 245 15 82 chr10 136865883 136865965 -8723323 + MER33 DNA MER1_type 98 184 -140 1169 126 0 0 chr10 136865968 136866143 -8723145 - AluSg/x SINE Alu -3 307 133 2136 82 7 3 chr10 136866144 136866435 -8722853 - AluSq SINE Alu -10 303 12 447 191 35 7 chr10 136866444 136866585 -8722703 + MER33 DNA MER1_type 219 363 0 2136 92 7 3 chr10 136866646 136866940 -8722348 - AluSq SINE Alu -18 295 1 854 150 8 0 chr10 136866959 136867086 -8722202 - FLAM_C SINE Alu -5 128 1 1911 138 20 7 chr10 136867089 136867394 -8721894 - AluJb SINE Alu -3 309 1 476 290 76 0 chr10 136868092 136868223 -8721065 + L1MC/D LINE L1 5620 5760 -2048 355 328 46 9 chr10 136868362 136868690 -8720598 - L2 LINE L2 -217 3096 2694 516 233 103 76 chr10 136868778 136868896 -8720392 + L1MC4a LINE L1 5280 5393 -2415 1523 149 4 4 chr10 136868896 136869137 -8720151 - AluSx SINE Alu -71 241 1 516 233 103 76 chr10 136869137 136869280 -8720008 + L1MC4a LINE L1 5393 5548 -2260 464 302 152 47 chr10 136869294 136869733 -8719555 + L1MC4a LINE L1 5620 6118 -1690 2010 144 0 0 chr10 136869733 136870032 -8719256 - AluSx SINE Alu -13 299 1 464 302 152 47 chr10 136870032 136870085 -8719203 + L1MC4a LINE L1 6118 6164 -1644 22 56 0 0 chr10 136870096 136870132 -8719156 + AT_rich Low_complexity Low_complexity 1 36 0 1811 111 82 4 chr10 136870135 136870405 -8718883 + AluJo SINE Alu 3 293 -19 262 326 38 14 chr10 136870424 136870664 -8718624 - L2 LINE L2 -606 2708 2420 185 316 89 0 chr10 136870682 136870761 -8718527 + L2 LINE L2 3206 3291 -22 895 163 0 25 chr10 136870781 136870941 -8718347 - AluJb SINE Alu 0 312 157 2011 112 30 3 chr10 136870959 136871285 -8718003 - AluSx SINE Alu 0 312 1 219 180 40 0 chr10 136872893 136872943 -8716345 + (TTCA)n Simple_repeat Simple_repeat 3 54 0 305 244 0 47 chr10 136872944 136873030 -8716258 - L2 LINE L2 0 3313 3232 251 323 21 0 chr10 136873164 136873260 -8716028 - L2 LINE L2 -291 3022 2925 393 117 0 0 chr10 136873905 136873965 -8715323 + (CAA)n Simple_repeat Simple_repeat 1 60 0 924 72 17 17 chr10 136874661 136874841 -8714447 + (TA)n Simple_repeat Simple_repeat 1 180 0 384 320 89 30 chr10 136874843 136874941 -8714347 - L1MC4 LINE L1 -1339 6983 6892 954 122 0 0 chr10 136874941 136875121 -8714167 + (TA)n Simple_repeat Simple_repeat 1 180 0 384 320 89 30 chr10 136875121 136875332 -8713956 - L1MC4 LINE L1 -1430 6892 1995 1343 142 0 5 chr10 136875436 136875641 -8713647 + AluSg/x SINE Alu 85 288 -22 2341 74 3 0 chr10 136875881 136876178 -8713110 - AluSx SINE Alu -14 298 1 243 273 26 13 chr10 136876803 136876880 -8712408 + MIR SINE MIR 31 108 -154 1920 122 24 7 chr10 136876995 136877291 -8711997 + AluSq SINE Alu 5 305 -8 2003 160 0 0 chr10 136877453 136877760 -8711528 - AluJb SINE Alu -5 307 1 1444 122 0 0 chr10 136878349 136878554 -8710734 - AluSg/x SINE Alu -3 307 103 1651 123 0 4 chr10 136878819 136879071 -8710217 + AluSg SINE Alu 59 309 -1 408 254 26 9 chr10 136879073 136879187 -8710101 - MIR SINE MIR -76 186 71 289 293 0 24 chr10 136879349 136879431 -8709857 + MIR3 SINE MIR 97 176 -32 2065 108 10 3 chr10 136880427 136880715 -8708573 + AluSg SINE Alu 1 290 -20 2266 103 0 0 chr10 136882289 136882590 -8706698 + AluSx SINE Alu 1 301 -11 1168 218 68 38 chr10 136882958 136883298 -8705990 - MLT1B LTR MaLR 0 390 41 363 283 75 0 chr10 136883302 136883422 -8705866 + MIR SINE MIR 48 176 -86 428 329 13 7 chr10 136884535 136884684 -8704604 - L2 LINE L2 -2 3270 3121 1971 137 0 13 chr10 136884876 136885183 -8704105 - AluSx SINE Alu -9 303 1 289 290 86 61 chr10 136886250 136886529 -8702759 + L2 LINE L2 3028 3313 0 2084 95 57 3 chr10 136886993 136887289 -8701999 + AluSq SINE Alu 1 312 -1 270 56 0 0 chr10 136888162 136888198 -8701090 + (GA)n Simple_repeat Simple_repeat 1 36 0 2072 119 0 10 chr10 136889099 136889401 -8699887 - AluSx SINE Alu -13 299 1 355 203 78 105 chr10 136889417 136889570 -8699718 - L1MC4 LINE L1 -63 7979 7831 2727 204 69 36 chr10 136889606 136889872 -8699416 - L1ME2 LINE L1 -10 6154 5898 2676 205 39 61 chr10 136889872 136890491 -8698797 - MER77 LTR ERV1 0 605 1 2727 204 69 36 chr10 136890491 136890932 -8698356 - L1ME2 LINE L1 -266 5898 5417 2183 121 0 3 chr10 136890932 136891245 -8698043 - AluSx SINE Alu 0 312 1 2727 204 69 36 chr10 136891245 136891279 -8698009 - L1ME2 LINE L1 -747 5417 5386 216 280 30 50 chr10 136891721 136891821 -8697467 + MIR SINE MIR 108 205 -57 234 271 0 14 chr10 136892195 136892265 -8697023 + CT-rich Low_complexity Low_complexity 2 70 0 403 325 49 20 chr10 136892640 136892886 -8696402 - L1ME4a LINE L1 -3 6118 5866 2132 84 3 3 chr10 136892968 136893253 -8696035 - AluSc SINE Alu -24 285 1 326 238 11 49 chr10 136893482 136893667 -8695621 + (TCTCTG)n Simple_repeat Simple_repeat 1 178 0 254 265 29 0 chr10 136894241 136894309 -8694979 - L1ME4a LINE L1 -509 5612 5543 252 311 54 34 chr10 136894682 136894830 -8694458 - L3 LINE CR1 -2 1575 1425 2078 128 0 0 chr10 136895145 136895443 -8693845 + AluSx SINE Alu 1 298 -14 755 222 179 57 chr10 136895468 136895832 -8693456 + Charlie8 DNA MER1_type 92 500 -1917 1593 195 101 13 chr10 136895832 136896207 -8693081 - MLT2D LTR ERVL 0 414 7 857 174 0 0 chr10 136896412 136896544 -8692744 + FLAM_C SINE Alu 2 133 0 23 0 0 0 chr10 136897354 136897377 -8691911 + AT_rich Low_complexity Low_complexity 1 23 0 530 229 93 36 chr10 136899290 136899487 -8689801 - MIR SINE MIR -19 243 46 291 268 0 0 chr10 136900714 136900785 -8688503 + CT-rich Low_complexity Low_complexity 2 72 0 751 169 0 35 chr10 136902140 136902282 -8687006 - AluJ SINE Alu 0 312 176 1085 140 5 54 chr10 136902325 136902370 -8686918 - AluJ SINE Alu -135 177 131 2198 98 7 0 chr10 136902370 136902667 -8686621 - AluSx SINE Alu -13 299 1 1085 140 5 54 chr10 136902667 136902807 -8686481 - AluJ SINE Alu -181 131 1 1951 116 0 0 chr10 136902853 136903121 -8686167 + AluSx SINE Alu 6 273 -39 605 301 122 24 chr10 136905443 136905667 -8683621 - L1ME4a LINE L1 -7 6114 5913 2366 124 11 3 chr10 136905667 136906015 -8683273 - L1PA15 LINE L1 -5 6160 5810 605 301 122 24 chr10 136906015 136906364 -8682924 - L1ME4a LINE L1 -208 5913 5477 498 135 39 118 chr10 136907875 136908104 -8681184 + MER113 DNA MER1_type? 6 216 -305 473 262 61 84 chr10 136908721 136908984 -8680304 + L2 LINE L2 2977 3233 -39 2358 72 0 3 chr10 136909130 136909435 -8679853 + AluY SINE Alu 1 304 -7 331 280 274 0 chr10 136909447 136909604 -8679684 - MIR SINE MIR -27 235 36 1510 114 126 8 chr10 136909869 136910155 -8679133 - AluSq SINE Alu 0 316 1 49 48 0 29 chr10 136910204 136910258 -8679030 + AT_rich Low_complexity Low_complexity 1 52 -48 1949 119 31 0 chr10 136910258 136910551 -8678737 - AluSx SINE Alu -10 302 1 49 48 0 29 chr10 136910551 136910599 -8678689 + AT_rich Low_complexity Low_complexity 52 100 0 331 292 199 48 chr10 136910787 136911078 -8678210 - L2 LINE L2 0 3272 2938 4844 259 44 20 chr10 136911088 136911591 -8677697 - L1MEc LINE L1 -4619 1777 1288 1990 156 0 0 chr10 136911591 136911893 -8677395 - AluJo SINE Alu -6 306 5 4844 259 44 20 chr10 136911893 136912871 -8676417 - L1MEc LINE L1 -5108 1288 249 1540 221 69 35 chr10 136912871 136913247 -8676041 - MLT1B LTR MaLR -1 389 1 4844 259 44 20 chr10 136913247 136913429 -8675859 - L1MEc LINE L1 -6147 249 73 2272 89 0 13 chr10 136915730 136916043 -8673245 - AluSx SINE Alu -3 309 1 2022 172 23 50 chr10 136916238 136916616 -8672672 - L1PB3 LINE L1 -2 6152 5462 2504 64 0 3 chr10 136916616 136916928 -8672360 - AluY SINE Alu 0 311 1 1497 77 43 0 chr10 136916934 136917143 -8672145 - L1PA13 LINE L1 -1 6162 5729 622 223 152 6 chr10 136917561 136917793 -8671495 + MER33 DNA MER1_type 1 314 -49 213 196 0 0 chr10 136918637 136918683 -8670605 + (CA)n Simple_repeat Simple_repeat 1 46 0 604 174 159 50 chr10 136920847 136921048 -8668240 - L1MB8 LINE L1 0 6178 5956 2285 119 0 0 chr10 136921060 136921372 -8667916 - AluSx SINE Alu 0 312 1 1531 121 9 13 chr10 136921415 136921639 -8667649 + AluJo SINE Alu 69 291 -21 305 343 34 11 chr10 136922031 136922206 -8667082 - L1ME LINE L1 -420 5750 5572 580 335 0 5 chr10 136923107 136923292 -8665996 - MIR SINE MIR -66 196 13 229 231 15 154 chr10 136924494 136924568 -8664720 + MIR SINE MIR 38 88 -174 1615 163 42 3 chr10 136924568 136924851 -8664437 - AluJo SINE Alu -4 308 15 229 231 15 154 chr10 136924851 136924906 -8664382 + MIR SINE MIR 88 149 -113 2138 106 0 0 chr10 136925139 136925454 -8663834 - AluSx SINE Alu 0 315 1 286 257 71 44 chr10 136925541 136925654 -8663634 - L2 LINE L2 -15 3298 3183 2316 61 0 14 chr10 136925819 136926112 -8663176 - AluY SINE Alu -4 307 19 366 143 0 0 chr10 136926587 136926650 -8662638 + (CA)n Simple_repeat Simple_repeat 1 63 0 237 108 0 0 chr10 136927324 136927361 -8661927 + (CA)n Simple_repeat Simple_repeat 1 37 0 2620 287 137 5 chr10 136928234 136929367 -8659921 - L1MC4 LINE L1 -304 7738 6457 244 294 226 0 chr10 136929735 136929837 -8659451 + MIR SINE MIR 46 170 -92 213 316 107 23 chr10 136931264 136931400 -8657888 + MIR SINE MIR 1 147 -67 328 276 41 0 chr10 136931837 136931935 -8657353 + MIR SINE MIR 82 183 -79 181 307 93 27 chr10 136931906 136931981 -8657307 - L3 LINE CR1 -904 673 594 * 387 278 278 0 chr10 136931987 136932138 -8657150 - MIR SINE MIR -65 197 5 1559 164 19 45 chr10 136932195 136932505 -8656783 - AluJo SINE Alu -10 302 1 252 306 121 57 chr10 136933797 136933954 -8655334 - MIR SINE MIR 0 262 96 309 258 114 48 chr10 136935498 136935665 -8653623 - MIR3 SINE MIR -27 181 4 379 274 14 82 chr10 136936098 136936139 -8653149 + MIR SINE MIR 111 153 -109 1991 128 3 14 chr10 136936139 136936274 -8653014 + AluJb SINE Alu 1 136 -176 1929 106 91 0 chr10 136936274 136936548 -8652740 + AluSx SINE Alu 1 299 -13 1991 128 3 14 chr10 136936548 136936709 -8652579 + AluJb SINE Alu 136 294 -18 379 274 14 82 chr10 136936709 136936813 -8652475 + MIR SINE MIR 153 246 -16 454 198 68 53 chr10 136937686 136937893 -8651395 - ORSL DNA AcHobo -42 233 24 396 266 203 0 chr10 136939106 136939264 -8650024 - MIR SINE MIR -51 211 22 21 36 0 0 chr10 136940548 136940576 -8648712 + AT_rich Low_complexity Low_complexity 1 28 0 341 150 276 24 chr10 136940576 136940703 -8648585 - L1ME4a LINE L1 0 6121 5963 245 372 49 12 chr10 136942013 136942177 -8647111 + MIR SINE MIR 87 256 -6 180 0 0 0 chr10 136942807 136942827 -8646461 + (TCCC)n Simple_repeat Simple_repeat 3 22 0 2290 46 0 28 chr10 136943182 136943502 -8645786 - AluY SINE Alu 0 315 4 380 352 51 80 chr10 136943751 136944103 -8645185 - L1MC4a LINE L1 -1759 6049 5708 258 306 19 46 chr10 136945455 136945563 -8643725 - L2 LINE L2 -961 2353 2249 272 286 36 0 chr10 136945580 136945664 -8643624 - MIR SINE MIR -106 102 16 1803 124 33 37 chr10 136945950 136946249 -8643039 + AluJo SINE Alu 1 298 -14 464 308 92 5 chr10 136946549 136946744 -8642544 + MIR SINE MIR 9 220 -42 236 208 0 0 chr10 136946941 136946989 -8642299 - L3 LINE CR1 -116 1461 1414 259 258 76 61 chr10 136947725 136947857 -8641431 + MIR SINE MIR 12 145 -117 283 212 298 13 chr10 136949000 136949151 -8640137 - MIR SINE MIR -32 230 37 2647 35 0 3 chr10 136950243 136950555 -8638733 - AluY SINE Alu 0 311 1 211 262 215 78 chr10 136950871 136950964 -8638324 + MIR SINE MIR 37 116 -146 218 79 0 26 chr10 136950964 136951002 -8638286 + (TTTA)n Simple_repeat Simple_repeat 3 39 0 1652 148 14 48 chr10 136951002 136951292 -8637996 - AluJo SINE Alu -32 280 1 211 262 215 78 chr10 136951292 136951388 -8637900 + MIR SINE MIR 115 253 -9 655 313 45 18 chr10 136951702 136951926 -8637362 - MIR SINE MIR -12 250 21 345 274 8 8 chr10 136952391 136952508 -8636780 - L1MEc LINE L1 -6192 204 88 347 323 184 15 chr10 136952590 136952791 -8636497 - MIR SINE MIR 0 262 28 197 295 64 13 chr10 136952839 136952917 -8636371 - MIR SINE MIR -108 100 19 693 298 93 56 chr10 136953145 136953649 -8635639 - L1ME4a LINE L1 -285 5836 5314 302 292 18 18 chr10 136953895 136954008 -8635280 + MIR SINE MIR 33 145 -117 193 268 36 0 chr10 136954126 136954182 -8635106 + L2 LINE L2 3213 3270 -2 191 250 60 36 chr10 136955165 136955249 -8634039 - MIR SINE MIR -118 144 59 274 285 117 14 chr10 136956984 136957198 -8632090 - L1ME4a LINE L1 0 6121 5886 4828 218 107 7 chr10 136957681 136958821 -8630467 + L1MDa LINE L1 16 1312 -5228 1850 153 4 4 chr10 136958821 136959130 -8630158 + AluJb SINE Alu 1 309 0 4828 218 107 7 chr10 136959130 136959321 -8629967 + L1MDa LINE L1 1312 1482 -5058 3080 177 65 60 chr10 136959293 136959446 -8629842 + L1MD1 LINE L1 5711 5862 -774 * 1944 164 0 13 chr10 136959446 136959757 -8629531 + AluSx SINE Alu 1 307 -5 3080 177 65 60 chr10 136959757 136960516 -8628772 + L1MD1 LINE L1 5862 6627 -9 1653 164 6 53 chr10 136960731 136960922 -8628366 - AluJo SINE Alu -4 308 137 2319 77 0 7 chr10 136960922 136961219 -8628069 - AluSc SINE Alu -14 295 1 884 127 30 0 chr10 136961219 136961350 -8627938 - AluJo SINE Alu -177 135 1 1653 164 6 53 chr10 136961219 136961350 -8627938 - AluJo SINE Alu -175 137 1 1147 150 11 1 chr10 136961598 136961820 -8627468 + L1PB1 LINE L1 5782 6006 -145 466 226 137 0 chr10 136963272 136963396 -8625892 - MER63A DNA MER1_type -3 207 67 196 264 132 16 chr10 136963940 136964069 -8625219 + L2 LINE L2 3075 3218 -54 374 333 8 8 chr10 136964513 136964645 -8624643 + (CA)n Simple_repeat Simple_repeat 2 133 0 2304 69 0 10 chr10 136964704 136965010 -8624278 - AluSc SINE Alu -6 303 1 729 314 68 9 chr10 136965020 136965345 -8623943 - L1ME3A LINE L1 0 6170 5827 620 185 101 11 chr10 136966613 136966791 -8622497 - L1ME3 LINE L1 -4 6158 5965 3039 175 30 24 chr10 136967262 136967690 -8621598 - L1MB7 LINE L1 -19 6165 5732 1960 122 116 36 chr10 136967690 136968027 -8621261 + THE1B LTR MaLR 1 364 0 3039 175 30 24 chr10 136968027 136968175 -8621113 - L1MB7 LINE L1 -452 5732 5586 553 261 197 34 chr10 136968613 136969108 -8620180 - L2 LINE L2 -188 3125 2579 2290 110 0 0 chr10 136969145 136969455 -8619833 + AluSx SINE Alu 1 310 -2 400 128 26 0 chr10 136969476 136969554 -8619734 + GA-rich Low_complexity Low_complexity 4 83 0 328 390 67 0 chr10 136969771 136969935 -8619353 - L1MC4a LINE L1 -1963 5845 5671 631 243 60 5 chr10 136969935 136970120 -8619168 - L1MD3 LINE L1 0 7995 7801 1821 150 31 3 chr10 136970120 136970407 -8618881 - AluJo SINE Alu -17 295 1 181 289 0 0 chr10 136970595 136970640 -8618648 - MIR3 SINE MIR -50 158 114 218 347 21 14 chr10 136971450 136971594 -8617694 - L2 LINE L2 -233 3039 2895 * 278 349 119 4 chr10 136971592 136971861 -8617427 + L2 LINE L2 2064 2363 -951 773 244 70 30 chr10 136971864 136972135 -8617153 + L1MC4a LINE L1 7162 7443 -365 389 306 92 29 chr10 136973843 136974016 -8615272 - MIR SINE MIR -73 189 6 264 329 24 0 chr10 136974454 136974536 -8614752 + (CATA)n Simple_repeat Simple_repeat 2 85 0 180 111 0 0 chr10 136975220 136975247 -8614041 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 418 291 24 22 chr10 136976252 136976470 -8612818 - L1ME3A LINE L1 -356 5806 5583 813 308 47 36 chr10 136976590 136977350 -8611938 - L1P5 LINE L1 -523 5633 4860 3510 163 52 27 chr10 136977388 136977502 -8611786 - L1MB8 LINE L1 -1 6177 6067 2295 107 0 16 chr10 136977502 136977820 -8611468 - AluSq SINE Alu 0 313 1 3510 163 52 27 chr10 136977820 136978544 -8610744 - L1MB8 LINE L1 -111 6067 5318 189 0 0 0 chr10 136978565 136978586 -8610702 + (CA)n Simple_repeat Simple_repeat 2 22 0 2225 89 3 3 chr10 136978586 136978878 -8610410 - AluY SINE Alu -19 292 1 1669 188 14 10 chr10 136978892 136979180 -8610108 - AluJo SINE Alu -23 289 1 556 156 0 0 chr10 136979180 136979289 -8609999 - L1MB8 LINE L1 -813 5333 5225 1138 183 43 0 chr10 136979289 136979519 -8609769 - Tigger2a DNA MER2_type 0 434 195 973 125 0 21 chr10 136979519 136979663 -8609625 + FLAM_C SINE Alu 1 141 -2 995 109 10 94 chr10 136979663 136979865 -8609423 - Tigger2a DNA MER2_type -249 185 1 2366 214 46 16 chr10 136979865 136980250 -8609038 - L1MB8 LINE L1 -920 5226 4811 2062 191 92 0 chr10 136980250 136980642 -8608646 - MSTA LTR MaLR 0 428 1 2366 214 46 16 chr10 136980642 136980902 -8608386 - L1MB8 LINE L1 -1335 4811 4561 380 130 14 0 chr10 136980902 136980971 -8608317 - MLT1A1 LTR MaLR 0 457 388 1356 130 33 0 chr10 136980971 136981186 -8608102 + AluJo SINE Alu 87 308 -4 980 211 32 67 chr10 136981186 136981498 -8607790 - MLT1A1 LTR MaLR -60 305 5 1089 115 6 13 chr10 136981602 136981758 -8607530 - AluSx SINE Alu -157 155 1 327 333 86 50 chr10 136982115 136982394 -8606894 - L2 LINE L2 -68 3204 2916 1938 102 0 18 chr10 136982697 136982972 -8606316 - AluSq SINE Alu -8 305 36 380 370 74 9 chr10 136983112 136983328 -8605960 - L1MC4a LINE L1 -1633 6175 5946 2190 113 0 0 chr10 136983444 136983745 -8605543 + AluSx SINE Alu 1 301 -11 1748 175 0 31 chr10 136983844 136984164 -8605124 + AluJb SINE Alu 1 310 -2 266 89 44 0 chr10 136984164 136984209 -8605079 + GA-rich Low_complexity Low_complexity 1 47 0 205 278 37 0 chr10 136985406 136985460 -8603828 - MIR SINE MIR -118 144 89 1833 157 0 17 chr10 136985501 136985801 -8603487 + AluSg SINE Alu 1 295 -15 714 173 67 17 chr10 136985818 136985997 -8603291 - MER20 DNA MER1_type -3 216 29 193 398 44 9 chr10 136986018 136986131 -8603157 - MIR SINE MIR -131 131 15 2217 102 3 0 chr10 136986561 136986865 -8602423 + AluSx SINE Alu 4 308 -4 2004 119 58 0 chr10 136987381 136987675 -8601613 - AluSx SINE Alu -1 311 1 242 294 84 59 chr10 136989792 136989911 -8599377 + MIR3 SINE MIR 42 163 -45 256 137 98 0 chr10 136990627 136990678 -8598610 - MIR SINE MIR -76 132 77 627 231 40 0 chr10 136990695 136990868 -8598420 - L1M4 LINE L1 -3008 3138 2959 213 284 0 15 chr10 136990868 136990935 -8598353 + MER5B DNA MER1_type 112 177 -1 210 214 34 101 chr10 136992461 136992550 -8596738 + MIR3 SINE MIR 90 172 -36 2013 112 0 7 chr10 136993176 136993454 -8595834 + AluSx SINE Alu 31 306 -6 2178 113 3 3 chr10 136993729 136994031 -8595257 - AluSx SINE Alu -10 302 1 989 92 0 0 chr10 136994032 136994173 -8595115 + THE1B LTR MaLR 224 364 0 369 301 86 0 chr10 136994914 136995077 -8594211 - L1ME3 LINE L1 -9 6153 5977 810 333 27 10 chr10 136995158 136995566 -8593722 - L1ME3 LINE L1 -315 5855 5441 1715 196 105 85 chr10 136995892 136996433 -8592855 + MLT2B3 LTR ERVL 3 554 0 246 322 58 0 chr10 136997175 136997262 -8592026 + MIR SINE MIR 111 202 -60 360 193 12 36 chr10 136997716 136997881 -8591407 + (TCCA)n Simple_repeat Simple_repeat 1 161 0 291 169 45 22 chr10 136997912 136998001 -8591287 + (TCCA)n Simple_repeat Simple_repeat 2 92 0 554 110 83 14 chr10 136998032 136998177 -8591111 + (TCCA)n Simple_repeat Simple_repeat 2 156 0 491 167 16 54 chr10 136998215 136998401 -8590887 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 293 272 81 30 chr10 136998428 136998595 -8590693 - MIR SINE MIR -59 203 30 204 28 0 83 chr10 137000142 137000178 -8589110 - L2 LINE L2 -214 3058 3026 340 331 62 0 chr10 137001284 137001429 -8587859 + MIR SINE MIR 36 189 -73 183 204 136 0 chr10 137001624 137001668 -8587620 + MIR SINE MIR 82 131 -131 316 336 104 48 chr10 137004370 137004763 -8584525 - L2 LINE L2 -1 3271 2857 183 80 0 0 chr10 137004940 137004965 -8584323 + (AGGGGG)n Simple_repeat Simple_repeat 5 29 0 330 281 0 0 chr10 137005713 137005795 -8583493 - MIR SINE MIR -66 142 61 258 262 24 42 chr10 137006021 137006189 -8583099 + (TCTCTG)n Simple_repeat Simple_repeat 6 170 0 364 331 38 0 chr10 137007545 137007678 -8581610 - MIR SINE MIR -64 198 61 250 159 0 0 chr10 137007680 137007724 -8581564 - MIR SINE MIR -113 149 106 308 248 149 8 chr10 137008166 137008287 -8581001 - MER58C DNA MER1_type 0 215 78 1996 127 17 3 chr10 137008350 137008642 -8580646 - AluJb SINE Alu -16 296 1 465 332 59 40 chr10 137008758 137009179 -8580109 - L1ME3 LINE L1 -164 6000 5554 289 283 0 39 chr10 137009400 137009580 -8579708 + (TGGG)n Simple_repeat Simple_repeat 3 175 0 * 384 303 0 0 chr10 137009462 137009640 -8579648 + (TGG)n Simple_repeat Simple_repeat 2 179 0 * 422 192 0 78 chr10 137009615 137009950 -8579338 + (ATGGTG)n Simple_repeat Simple_repeat 1 308 0 423 198 83 25 chr10 137010154 137010275 -8579013 + MIR SINE MIR 20 147 -61 2049 105 10 10 chr10 137011016 137011320 -8577968 + AluSq SINE Alu 1 304 -9 293 215 7 89 chr10 137012271 137012406 -8576882 + C-rich Low_complexity Low_complexity 2 125 0 370 256 31 54 chr10 137013129 137013295 -8575993 - MIR3 SINE MIR -8 200 35 2297 99 0 3 chr10 137013500 137013814 -8575474 - AluSq SINE Alu 0 313 1 2374 67 3 3 chr10 137014641 137014939 -8574349 - AluY SINE Alu -13 298 1 241 340 32 48 chr10 137015061 137015228 -8574060 - MIR SINE MIR -56 152 4 240 267 13 13 chr10 137015958 137016033 -8573255 - MLT1K LTR MaLR -36 552 478 337 282 206 8 chr10 137016699 137016830 -8572458 - L1ME4a LINE L1 -1 6120 5964 335 327 188 10 chr10 137022699 137022992 -8566296 + L1ME LINE L1 5424 5684 -437 1068 216 65 7 chr10 137025312 137025590 -8563698 + MLT1A1 LTR MaLR 72 365 0 744 296 74 17 chr10 137027499 137027918 -8561370 + LTR16A1 LTR ERVL 11 453 -4 1752 168 0 7 chr10 137029025 137029322 -8559966 + AluJb SINE Alu 1 295 -17 229 156 0 44 chr10 137029709 137029754 -8559534 - L2 LINE L2 -11 3261 3219 267 279 51 0 chr10 137031611 137031690 -8557598 - MIR3 SINE MIR -45 163 81 374 243 90 21 chr10 137031773 137031917 -8557371 + MIR SINE MIR 36 189 -73 415 312 119 48 chr10 137032083 137032856 -8556432 + L1MC4a LINE L1 4392 5109 -1037 3595 168 25 24 chr10 137032856 137033257 -8556031 + L1MB7 LINE L1 5538 5942 -242 2595 100 42 0 chr10 137033257 137033617 -8555671 + THE1C LTR MaLR 1 375 0 3595 168 25 24 chr10 137033617 137033848 -8555440 + L1MB7 LINE L1 5942 6171 -13 415 312 119 48 chr10 137033848 137033976 -8555312 + L1MC4a LINE L1 5109 5227 -919 2165 101 16 3 chr10 137033976 137034282 -8555006 - AluSg SINE Alu 0 310 1 415 312 119 48 chr10 137034282 137034872 -8554416 + L1MC4a LINE L1 5227 5399 -747 2018 80 14 31 chr10 137036983 137037296 -8551992 + AluY SINE Alu 1 308 0 308 277 89 0 chr10 137037311 137037412 -8551876 + MIR SINE MIR 89 198 -64 281 269 131 39 chr10 137038768 137038898 -8550390 - MIR SINE MIR -117 145 4 195 296 86 0 chr10 137039629 137039710 -8549578 - MIR SINE MIR -171 91 4 491 317 72 0 chr10 137040730 137040910 -8548378 - MIR SINE MIR -25 237 45 199 361 74 0 chr10 137043042 137043150 -8546138 + MIR SINE MIR 58 173 -89 265 289 102 47 chr10 137046043 137046171 -8543117 - MIR SINE MIR -32 230 96 223 284 101 9 chr10 137046439 137046548 -8542740 - MIR SINE MIR -79 183 65 224 286 20 92 chr10 137047357 137047455 -8541833 + MIR SINE MIR 107 197 -65 380 208 111 3 chr10 137047548 137047692 -8541596 - MIR SINE MIR -68 140 16 266 254 221 33 chr10 137047941 137048063 -8541225 + MIR3 SINE MIR 43 187 -21 230 254 119 0 chr10 137048800 137048867 -8540421 - MIR SINE MIR -98 164 90 201 333 43 0 chr10 137049107 137049176 -8540112 + L3 LINE CR1 1345 1416 -161 282 304 0 0 chr10 137049271 137049350 -8539938 + (ATGGTG)n Simple_repeat Simple_repeat 4 82 0 529 327 106 9 chr10 137049350 137049576 -8539712 - MIR SINE MIR -1 261 14 186 400 50 0 chr10 137050799 137050919 -8538369 - L2 LINE L2 -1 3271 3146 189 164 0 0 chr10 137051232 137051271 -8538017 - MIR SINE MIR -113 149 112 278 259 27 62 chr10 137051374 137051486 -8537802 + MIR3 SINE MIR 55 162 -46 282 337 95 11 chr10 137052487 137052677 -8536611 + MIR SINE MIR 7 212 -50 313 351 58 21 chr10 137054680 137054871 -8534417 + L2 LINE L2 3098 3295 -18 209 264 115 23 chr10 137054911 137054998 -8534290 + L2 LINE L2 3216 3310 -3 409 219 51 32 chr10 137055718 137055730 -8533558 + L1MC4 LINE L1 1968 1978 -6344 1781 29 0 0 chr10 137055730 137055934 -8533354 + L1PA5 LINE L1 5937 6140 -14 409 219 51 32 chr10 137055934 137056046 -8533242 + L1MC4 LINE L1 1978 6983 -1339 * 414 323 0 0 chr10 137056000 137056096 -8533192 - L1MC4 LINE L1 -1339 6703 6608 401 287 107 8 chr10 137056022 137056144 -8533144 + L1MCa LINE L1 1995 2128 -4298 * 420 274 17 95 chr10 137056350 137056529 -8532759 + L1ME4a LINE L1 5955 6119 -2 359 278 143 0 chr10 137056684 137056817 -8532471 - MIR SINE MIR -107 155 4 316 365 13 26 chr10 137057790 137057946 -8531342 + MIR SINE MIR 16 169 -93 2164 118 0 3 chr10 137058699 137059003 -8530285 - AluSx SINE Alu -9 303 1 685 189 15 154 chr10 137059635 137059831 -8529457 - MER58A DNA MER1_type -2196 224 71 895 109 0 0 chr10 137059831 137059959 -8529329 + L1PB3 LINE L1 6027 6154 0 685 189 15 154 chr10 137059959 137060021 -8529267 - MER58A DNA MER1_type -2349 71 2 307 301 153 12 chr10 137061065 137061228 -8528060 + MIR SINE MIR 77 262 0 693 82 0 0 chr10 137061313 137061410 -8527878 + (TCCA)n Simple_repeat Simple_repeat 4 100 0 1743 155 0 28 chr10 137061434 137061718 -8527570 + AluJo SINE Alu 5 280 -32 210 302 0 16 chr10 137061746 137061809 -8527479 - L2 LINE L2 -47 3225 3164 322 286 191 0 chr10 137062475 137062601 -8526687 - MER5A DNA MER1_type -34 155 6 376 155 42 0 chr10 137063650 137063721 -8525567 - MIR SINE MIR -100 162 89 351 313 45 0 chr10 137064627 137064739 -8524549 + L2 LINE L2 3155 3271 -1 255 324 41 59 chr10 137064789 137064959 -8524329 + L2 LINE L2 3096 3262 -10 793 248 65 7 chr10 137065976 137066254 -8523034 + MER33 DNA MER1_type 27 320 -4 241 257 68 0 chr10 137066257 137066331 -8522957 + MIR SINE MIR 111 189 -73 277 372 9 0 chr10 137066811 137066924 -8522364 - MIR SINE MIR -129 133 20 306 361 55 13 chr10 137069455 137069693 -8519595 + L2 LINE L2 2858 3105 -208 420 263 168 16 chr10 137070003 137070428 -8518860 + LTR50 LTR ERVL 216 795 0 278 349 138 30 chr10 137071650 137071919 -8517369 + L3b LINE CR1 1155 1452 -131 492 296 111 16 chr10 137071971 137072214 -8517074 + L2 LINE L2 2505 2770 -544 284 331 44 29 chr10 137072646 137072782 -8516506 + MER5B DNA MER1_type 29 166 -23 290 263 35 61 chr10 137072812 137072926 -8516362 - MIR SINE MIR -74 134 24 331 360 23 29 chr10 137073221 137073396 -8515892 - MIR SINE MIR -1 261 88 557 175 21 0 chr10 137074080 137074177 -8515111 + AluSg/x SINE Alu 208 306 -3 301 297 267 10 chr10 137074383 137074585 -8514703 - MIR SINE MIR -1 261 8 324 302 65 29 chr10 137074653 137074792 -8514496 + MIR3 SINE MIR 16 159 -49 402 297 25 0 chr10 137074817 137074935 -8514353 + MER117 DNA MER1_type 41 161 -36 275 286 20 10 chr10 137077022 137077120 -8512168 - L3 LINE CR1 -203 1374 1276 259 307 0 0 chr10 137077201 137077276 -8512012 + (CA)n Simple_repeat Simple_repeat 2 76 0 301 354 26 0 chr10 137077399 137077512 -8511776 - L3 LINE CR1 -442 1135 1020 200 296 183 0 chr10 137077500 137077571 -8511717 + MIR3 SINE MIR 119 202 -6 * 632 242 35 40 chr10 137081362 137081560 -8507728 - MIR3 SINE MIR -9 199 3 193 333 65 37 chr10 137082114 137082222 -8507066 - L2 LINE L2 -8 3264 3154 348 289 114 18 chr10 137082443 137082609 -8506679 - MIR SINE MIR -76 186 5 209 185 0 37 chr10 137083398 137083425 -8505863 + A-rich Low_complexity Low_complexity 4 30 -25 2011 131 3 0 chr10 137083425 137083715 -8505573 - AluSx SINE Alu -21 291 1 209 185 0 37 chr10 137083715 137083741 -8505547 + A-rich Low_complexity Low_complexity 30 55 0 599 264 165 15 chr10 137083793 137084194 -8505094 + L1ME4a LINE L1 5640 6100 -21 264 169 70 28 chr10 137085570 137085641 -8503647 + L2 LINE L2 3197 3270 -2 542 139 0 0 chr10 137085748 137085827 -8503461 - AluSg/x SINE Alu -23 287 209 203 374 32 16 chr10 137086511 137086634 -8502654 + MIR SINE MIR 88 212 -50 538 305 69 17 chr10 137087006 137087180 -8502108 + MER5A DNA MER1_type 7 189 0 324 335 24 8 chr10 137089749 137089896 -8499392 - MIR SINE MIR -56 152 3 23 0 0 0 chr10 137090214 137090237 -8499051 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr10 137090879 137090909 -8498379 + AT_rich Low_complexity Low_complexity 1 30 0 207 0 0 0 chr10 137091862 137091885 -8497403 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2369 85 0 0 chr10 137091892 137092199 -8497089 + AluSx SINE Alu 1 307 -5 192 40 0 0 chr10 137092331 137092356 -8496932 + (A)n Simple_repeat Simple_repeat 1 25 0 2294 88 7 0 chr10 137092807 137093104 -8496184 + AluSc SINE Alu 2 300 -9 373 227 118 8 chr10 137093430 137093549 -8495739 + L2 LINE L2 3169 3300 -13 187 305 68 0 chr10 137094551 137094610 -8494678 + MIR SINE MIR 78 140 -68 629 290 92 30 chr10 137095030 137095561 -8493727 + L1ME4a LINE L1 5557 6120 -1 208 186 0 23 chr10 137098175 137098218 -8491070 + (TTCA)n Simple_repeat Simple_repeat 1 42 0 320 319 113 27 chr10 137098284 137098585 -8490703 + L2 LINE L2 2552 2878 -436 272 335 190 5 chr10 137098616 137098837 -8490451 + L2 LINE L2 2966 3227 -86 201 275 28 73 chr10 137102212 137102321 -8486967 + MIR SINE MIR 84 187 -75 2676 155 9 14 chr10 137102352 137102665 -8486623 + MSTB LTR MaLR 3 315 -111 2142 90 0 23 chr10 137102665 137102964 -8486324 - AluY SINE Alu -19 292 1 2676 155 9 14 chr10 137102964 137103076 -8486212 + MSTB LTR MaLR 315 426 0 1015 264 159 10 chr10 137103884 137104548 -8484740 - L2 LINE L2 -2 3311 2544 184 325 86 51 chr10 137104642 137104759 -8484529 - L2 LINE L2 -7 3306 3186 293 325 13 0 chr10 137104943 137105020 -8484268 + MIR3 SINE MIR 93 170 -38 369 307 13 120 chr10 137105022 137105331 -8483957 + L2 LINE L2 2993 3268 -4 1982 119 0 7 chr10 137107072 137107357 -8481931 + AluSq SINE Alu 1 283 -30 505 322 65 29 chr10 137108458 137108703 -8480585 + MIR SINE MIR 9 262 0 398 309 0 39 chr10 137109226 137109407 -8479881 + L1MC3 LINE L1 5714 5887 -1921 186 43 0 0 chr10 137109452 137109475 -8479813 + (A)n Simple_repeat Simple_repeat 1 23 0 233 264 401 6 chr10 137110332 137110514 -8478774 - MIR SINE MIR 0 262 9 2388 222 44 11 chr10 137110552 137111168 -8478120 + L1MD1 LINE L1 5604 6239 -3 311 313 12 0 chr10 137111175 137111258 -8478030 + L1MC3 LINE L1 6084 6167 -1618 200 147 0 0 chr10 137111345 137111385 -8477903 + MIR SINE MIR 111 149 -113 1484 184 17 37 chr10 137111385 137111684 -8477604 + AluJo SINE Alu 1 293 -19 1753 171 0 7 chr10 137111687 137111980 -8477308 + AluSx SINE Alu 1 291 -21 214 333 0 13 chr10 137112006 137112081 -8477207 + MIR SINE MIR 146 219 -43 219 218 26 64 chr10 137112681 137112759 -8476529 + C-rich Low_complexity Low_complexity 2 76 0 525 234 20 66 chr10 137112787 137112969 -8476319 - MIR SINE MIR -65 143 18 2618 52 3 0 chr10 137114094 137114399 -8474889 + AluY SINE Alu 2 307 -4 381 204 197 41 chr10 137114518 137114665 -8474623 - MIR SINE MIR -80 182 13 376 275 75 22 chr10 137116699 137116852 -8472436 + MIR3 SINE MIR 4 166 -42 262 299 0 13 chr10 137116872 137116949 -8472339 + MIR SINE MIR 62 137 -71 1596 184 40 3 chr10 137118381 137118680 -8470608 + AluJb SINE Alu 2 311 -1 2515 81 0 0 chr10 137119495 137119802 -8469486 + AluSq SINE Alu 1 307 -6 1028 202 50 5 chr10 137119885 137120083 -8469205 + AluJb SINE Alu 84 290 -22 327 224 75 47 chr10 137120286 137120393 -8468895 - L2 LINE L2 0 3272 3163 1859 167 0 7 chr10 137120532 137120826 -8468462 + AluSx SINE Alu 1 292 -20 2408 99 22 6 chr10 137121576 137121939 -8467349 + L1MA5A LINE L1 5923 6291 -6 25 0 0 0 chr10 137121939 137121964 -8467324 + AT_rich Low_complexity Low_complexity 1 25 0 487 239 90 93 chr10 137122512 137122889 -8466399 + L2 LINE L2 2896 3271 -1 615 221 99 12 chr10 137125598 137125770 -8463518 + MER5A DNA MER1_type 1 187 -2 1660 162 4 7 chr10 137126624 137126895 -8462393 - AluSx SINE Alu 0 312 43 1136 108 6 6 chr10 137127064 137127221 -8462067 - AluSx SINE Alu -155 157 1 394 288 6 35 chr10 137127413 137127583 -8461705 + CT-rich Low_complexity Low_complexity 3 167 0 263 282 9 31 chr10 137128049 137128186 -8461102 + CT-rich Low_complexity Low_complexity 1 133 0 338 101 22 45 chr10 137128244 137128333 -8460955 + (TCTCC)n Simple_repeat Simple_repeat 3 89 0 207 268 72 41 chr10 137128525 137128622 -8460666 - L2 LINE L2 -64 3249 3150 1318 140 11 135 chr10 137128634 137128713 -8460575 - MLT1B LTR MaLR 0 390 303 1860 166 7 10 chr10 137128713 137129014 -8460274 + AluSx SINE Alu 5 304 -8 1318 140 11 135 chr10 137129014 137129283 -8460005 - MLT1B LTR MaLR -87 303 85 432 257 0 29 chr10 137131024 137131160 -8458128 - AluSg/x SINE Alu -21 291 160 3794 177 10 13 chr10 137131523 137132497 -8456791 + L1MA4A LINE L1 5031 6003 -300 1757 168 24 3 chr10 137132666 137132958 -8456330 - AluJo SINE Alu -14 298 1 262 268 29 22 chr10 137133558 137133696 -8455592 + CT-rich Low_complexity Low_complexity 5 143 0 694 313 34 34 chr10 137134621 137134944 -8454344 - MER102b DNA MER1_type 0 341 19 213 189 0 0 chr10 137136013 137136050 -8453238 + L2 LINE L2 3218 3254 -18 658 269 62 5 chr10 137137563 137137756 -8451532 + MER3 DNA MER1_type 6 209 0 1053 223 57 14 chr10 137137785 137137996 -8451292 - MER58A DNA MER1_type -1 223 4 456 316 38 0 chr10 137138005 137138138 -8451150 + MIR SINE MIR 50 187 -75 224 239 22 0 chr10 137138145 137138191 -8451097 + L2 LINE L2 3266 3312 -1 453 304 88 17 chr10 137138203 137138384 -8450904 - MIR SINE MIR -48 214 21 1833 97 119 11 chr10 137139524 137139792 -8449496 + AluSx SINE Alu 1 297 -15 354 305 42 34 chr10 137140788 137141027 -8448261 + L2 LINE L2 2818 3058 -214 185 231 0 0 chr10 137141122 137141161 -8448127 + L2 LINE L2 3261 3299 -14 334 297 39 54 chr10 137142650 137142883 -8446405 - MIR SINE MIR -19 243 15 263 365 90 0 chr10 137143960 137144116 -8445172 + MIR SINE MIR 88 257 -5 240 242 110 11 chr10 137144462 137144553 -8444735 + MIR3 SINE MIR 14 113 -95 702 213 11 77 chr10 137145183 137145366 -8443922 - MER5B DNA MER1_type -6 172 2 216 86 0 0 chr10 137145981 137146016 -8443272 + (A)n Simple_repeat Simple_repeat 1 35 0 340 244 104 17 chr10 137146151 137146266 -8443022 + MIR SINE MIR 1 125 -137 30 45 0 0 chr10 137150918 137150962 -8438326 + GC_rich Low_complexity Low_complexity 1 44 0 22 56 0 0 chr10 137150973 137151009 -8438279 + GC_rich Low_complexity Low_complexity 1 36 0 211 85 21 43 chr10 137151276 137151323 -8437965 + (CGG)n Simple_repeat Simple_repeat 3 48 0 22 0 0 0 chr10 137151371 137151393 -8437895 + GC_rich Low_complexity Low_complexity 1 22 0 21 57 0 0 chr10 137151480 137151515 -8437773 + GC_rich Low_complexity Low_complexity 1 35 0 2254 109 0 0 chr10 137153591 137153899 -8435389 + AluSx SINE Alu 1 308 0 239 157 20 0 chr10 137155002 137155053 -8434235 + (CATA)n Simple_repeat Simple_repeat 3 54 0 2157 131 3 6 chr10 137156853 137157166 -8432122 - AluSx SINE Alu 0 312 1 1155 193 18 22 chr10 137157171 137157446 -8431842 - L1MA6 LINE L1 -172 6128 5855 1284 106 0 32 chr10 137158054 137158242 -8431046 + AluSc SINE Alu 109 290 -19 1177 219 47 49 chr10 137158242 137158731 -8430557 - L1MDa LINE L1 -4698 1842 1355 375 232 53 26 chr10 137158769 137158920 -8430368 - L1MC5 LINE L1 -476 7485 7331 873 222 28 0 chr10 137158922 137159098 -8430190 + MER58A DNA MER1_type 2 182 -42 2253 110 0 13 chr10 137159098 137159415 -8429873 - AluYb8 SINE Alu -5 313 1 2495 66 0 35 chr10 137159421 137159740 -8429548 - AluY SINE Alu -3 308 1 286 185 0 0 chr10 137159957 137160011 -8429277 - Alu SINE Alu 0 308 255 186 150 0 0 chr10 137160035 137160075 -8429213 + (C)n Simple_repeat Simple_repeat 1 40 0 5868 116 14 36 chr10 137160306 137160334 -8428954 - Tigger1 DNA MER2_type -1016 1402 1375 2400 89 0 0 chr10 137160334 137160627 -8428661 + AluY SINE Alu 1 293 -18 5868 116 14 36 chr10 137160627 137161163 -8428125 - Tigger1 DNA MER2_type -1043 1375 867 2372 103 6 3 chr10 137161163 137161474 -8427814 - AluSx SINE Alu 0 312 1 5868 116 14 36 chr10 137161474 137161911 -8427377 - Tigger1 DNA MER2_type -1551 867 422 1938 128 16 19 chr10 137161931 137162243 -8427045 - AluSx SINE Alu -1 311 1 2132 138 0 3 chr10 137162742 137163046 -8426242 + AluJb SINE Alu 1 303 -9 2435 57 3 7 chr10 137163156 137163456 -8425832 - AluY SINE Alu -12 299 1 477 248 9 0 chr10 137163534 137163639 -8425649 + FLAM_A SINE Alu 26 131 -11 221 237 79 13 chr10 137163888 137163964 -8425324 - MIR SINE MIR -6 256 176 205 255 72 0 chr10 137164174 137164327 -8424961 + (TATAG)n Simple_repeat Simple_repeat 2 165 0 2571 52 0 16 chr10 137164338 137164648 -8424640 + AluY SINE Alu 1 305 -6 1964 148 0 26 chr10 137164867 137165170 -8424118 + AluJb SINE Alu 1 295 -17 2528 67 0 0 chr10 137165172 137165470 -8423818 + AluY SINE Alu 1 298 -13 700 167 9 0 chr10 137165703 137165817 -8423471 - MER8 DNA MER2_type 0 239 125 651 201 6 69 chr10 137165931 137166090 -8423198 + MLT1B LTR MaLR 1 149 -225 1213 114 0 111 chr10 137166121 137166446 -8422842 - AluSx SINE Alu -23 289 1 808 205 8 126 chr10 137166446 137166717 -8422571 + MLT1B LTR MaLR 138 390 0 195 322 17 0 chr10 137166739 137166798 -8422490 - MIR SINE MIR -61 147 88 22 0 0 0 chr10 137166814 137166836 -8422452 + AT_rich Low_complexity Low_complexity 1 22 0 315 0 0 0 chr10 137169254 137169289 -8419999 + (CA)n Simple_repeat Simple_repeat 1 35 0 186 43 0 0 chr10 137169481 137169504 -8419784 + (CA)n Simple_repeat Simple_repeat 2 24 0 341 335 50 17 chr10 137171631 137171856 -8417432 + MIR SINE MIR 3 236 -26 2036 141 10 3 chr10 137172955 137173261 -8416027 - AluSx SINE Alu -4 308 1 296 284 0 0 chr10 137173264 137173338 -8415950 - MIR SINE MIR -16 246 173 656 139 49 35 chr10 137173389 137173533 -8415755 + L1MB3 LINE L1 6036 6181 -2 1221 148 44 35 chr10 137173794 137174023 -8415265 + AluJb SINE Alu 60 290 -22 21 71 0 0 chr10 137174335 137174377 -8414911 + AT_rich Low_complexity Low_complexity 1 42 0 1702 146 11 25 chr10 137174421 137174701 -8414587 + AluJb SINE Alu 24 299 -13 21 0 0 0 chr10 137174960 137174981 -8414307 + AT_rich Low_complexity Low_complexity 1 21 0 239 205 0 0 chr10 137175209 137175248 -8414040 - MER57A LTR ERV1 -70 333 295 1303 163 5 5 chr10 137176996 137177211 -8412077 - AluSg/x SINE Alu -12 298 84 455 216 10 20 chr10 137178100 137178202 -8411086 - FLAM_A SINE Alu -20 122 22 707 119 0 0 chr10 137178289 137178390 -8410898 + HY3 scRNA scRNA 1 101 0 591 268 110 106 chr10 137178892 137178973 -8410315 - L2 LINE L2 0 3313 3234 2461 80 0 0 chr10 137178973 137179275 -8410013 + AluY SINE Alu 1 302 -9 591 268 110 106 chr10 137179275 137179325 -8409963 - L2 LINE L2 -79 3234 3186 2309 103 3 0 chr10 137179325 137179635 -8409653 + AluY SINE Alu 1 311 0 591 268 110 106 chr10 137179635 137179797 -8409491 - L2 LINE L2 -127 3186 3026 2426 97 0 0 chr10 137179797 137180108 -8409180 + AluSp SINE Alu 1 311 -2 591 268 110 106 chr10 137180108 137180410 -8408878 - L2 LINE L2 -287 3026 2698 967 147 0 0 chr10 137180420 137180556 -8408732 + AluSq/x SINE Alu 1 136 -177 1966 150 0 16 chr10 137180556 137180863 -8408425 + AluSx SINE Alu 1 302 -10 839 299 21 79 chr10 137180863 137181040 -8408248 - L2 LINE L2 -620 2694 2508 1784 169 36 0 chr10 137181040 137181341 -8407947 + AluJo SINE Alu 1 312 0 839 299 21 79 chr10 137181341 137181591 -8407697 - L2 LINE L2 -806 2508 2292 1110 143 24 57 chr10 137181598 137181779 -8407509 - Tigger1 DNA MER2_type 0 2418 2243 2300 105 3 0 chr10 137181779 137182084 -8407204 + AluSp SINE Alu 2 307 -6 1110 143 24 57 chr10 137182084 137182111 -8407177 - Tigger1 DNA MER2_type -175 2243 2217 506 198 0 0 chr10 137182114 137182200 -8407088 + AluS SINE Alu 2 87 -226 315 291 0 0 chr10 137182318 137182397 -8406891 - L2 LINE L2 -1025 2289 2211 2409 75 0 25 chr10 137182468 137182787 -8406501 + AluY SINE Alu 1 311 0 27 81 0 0 chr10 137183174 137183236 -8406052 + AT_rich Low_complexity Low_complexity 1 62 0 2135 61 0 15 chr10 137184304 137184565 -8404723 - AluY SINE Alu -14 297 41 311 326 63 36 chr10 137184844 137184890 -8404398 + L1MDa LINE L1 1267 1310 -5230 2286 93 0 26 chr10 137184890 137185200 -8404088 + AluSx SINE Alu 1 302 -10 311 326 63 36 chr10 137185200 137185374 -8403914 + L1MDa LINE L1 1310 1493 -5047 2308 114 3 0 chr10 137185382 137185689 -8403599 + AluSq SINE Alu 1 308 -5 1570 147 37 29 chr10 137185745 137185905 -8403383 - MER7A DNA MER2_type -2765 273 111 1757 131 19 64 chr10 137185905 137186217 -8403071 - AluJb SINE Alu -14 298 1 1570 147 37 29 chr10 137186217 137186328 -8402960 - MER7A DNA MER2_type -2927 111 2 1318 82 0 0 chr10 137186365 137186524 -8402764 + AluSg/x SINE Alu 72 230 -82 237 108 0 0 chr10 137186579 137186616 -8402672 + (CA)n Simple_repeat Simple_repeat 2 38 0 290 251 105 42 chr10 137186640 137186831 -8402457 + L1MDa LINE L1 1533 1735 -4805 1127 105 0 13 chr10 137186833 137186986 -8402302 + AluSx SINE Alu 7 157 -155 1599 177 0 8 chr10 137187986 137188251 -8401037 + AluJb SINE Alu 37 299 -13 290 248 93 65 chr10 137188611 137188631 -8400657 - L1MDa LINE L1 -4788 1752 1734 2247 112 3 0 chr10 137188631 137188935 -8400353 - AluSx SINE Alu -1 311 7 290 248 93 65 chr10 137188935 137189128 -8400160 - L1MDa LINE L1 -4806 1734 1533 237 108 0 0 chr10 137189152 137189189 -8400099 + (TG)n Simple_repeat Simple_repeat 2 38 0 2266 64 53 0 chr10 137189639 137189920 -8399368 - AluY SINE Alu -15 296 1 1163 133 0 6 chr10 137189957 137190130 -8399158 + AluSg/x SINE Alu 135 306 -6 560 166 61 3 chr10 137190265 137190429 -8398859 + AluJb SINE Alu 83 303 -9 524 303 19 0 chr10 137190429 137190591 -8398697 + L1ME3A LINE L1 5993 6157 -13 21 0 0 0 chr10 137191381 137191402 -8397886 + AT_rich Low_complexity Low_complexity 1 21 0 280 288 119 69 chr10 137191409 137191569 -8397719 - MIR3 SINE MIR -14 194 27 1591 181 10 23 chr10 137192161 137192464 -8396824 + AluJo SINE Alu 14 312 0 2284 75 0 14 chr10 137192571 137192865 -8396423 - AluSc SINE Alu -18 291 2 2486 51 0 7 chr10 137193442 137193738 -8395550 - AluSc SINE Alu -15 294 1 2280 51 3 27 chr10 137195178 137195367 -8393921 - AluSp SINE Alu 0 318 138 2475 49 0 10 chr10 137195367 137195671 -8393617 - AluY SINE Alu -10 301 1 2280 51 3 27 chr10 137195671 137195806 -8393482 - AluSp SINE Alu -180 138 1 2367 84 3 3 chr10 137196256 137196555 -8392733 + AluSc SINE Alu 1 299 -10 2337 107 0 0 chr10 137196593 137196902 -8392386 + AluSx SINE Alu 1 309 -3 2140 66 4 7 chr10 137197074 137197347 -8391941 + AluY SINE Alu 1 272 -39 1074 124 0 0 chr10 137197351 137197504 -8391784 + AluSg/x SINE Alu 160 312 0 312 231 37 65 chr10 137197573 137197681 -8391607 + MIR SINE MIR 158 262 0 26 0 0 0 chr10 137197704 137197730 -8391558 + AT_rich Low_complexity Low_complexity 1 26 0 2299 80 27 3 chr10 137197740 137198040 -8391248 + AluSg SINE Alu 1 307 -3 5831 83 60 37 chr10 137198042 137198941 -8390347 - L1MA1 LINE L1 -8 6294 5375 300 280 80 48 chr10 137199458 137199583 -8389705 + MIR SINE MIR 22 150 -112 226 344 0 0 chr10 137199819 137199912 -8389376 - MIR SINE MIR 0 262 170 227 307 0 44 chr10 137200542 137200679 -8388609 + CT-rich Low_complexity Low_complexity 1 131 0 851 136 0 8 chr10 137202116 137202241 -8387047 + AluSg/x SINE Alu 162 285 -27 405 0 0 0 chr10 137202248 137202293 -8386995 + (CATA)n Simple_repeat Simple_repeat 2 46 0 1462 164 25 85 chr10 137202400 137202718 -8386570 - AluJb SINE Alu -13 299 1 771 310 25 9 chr10 137202783 137203109 -8386179 - L1M4 LINE L1 -2252 3894 3564 288 0 0 0 chr10 137204644 137204676 -8384612 + (CA)n Simple_repeat Simple_repeat 1 32 0 210 91 0 0 chr10 137204859 137204892 -8384396 + (CA)n Simple_repeat Simple_repeat 1 33 0 198 0 0 0 chr10 137206353 137206375 -8382913 + (TTTC)n Simple_repeat Simple_repeat 1 22 0 882 209 0 0 chr10 137206395 137206558 -8382730 - FRAM SINE Alu 0 166 4 227 30 0 30 chr10 137206565 137206598 -8382690 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 1211 217 53 8 chr10 137206604 137206867 -8382421 - AluJo SINE Alu -31 281 7 863 223 14 19 chr10 137206925 137207140 -8382148 - AluJo SINE Alu -98 214 1 191 297 0 16 chr10 137207721 137207785 -8381503 - L2 LINE L2 0 3272 3210 1395 226 0 3 chr10 137207962 137208245 -8381043 + AluJo SINE Alu 1 282 -30 1834 131 0 32 chr10 137208554 137208866 -8380422 - AluY SINE Alu -4 307 6 222 283 0 0 chr10 137208956 137209009 -8380279 + L2 LINE L2 2225 2277 -1037 2326 155 45 86 chr10 137209018 137209426 -8379862 + Tigger1 DNA MER2_type 1 385 -2033 1499 158 6 104 chr10 137209426 137209761 -8379527 + AluSx SINE Alu 1 302 -10 2326 155 45 86 chr10 137209761 137209863 -8379425 + Tigger1 DNA MER2_type 385 490 -1928 1736 172 28 0 chr10 137210050 137210341 -8378947 + AluJo SINE Alu 1 299 -13 2452 63 0 66 chr10 137210601 137210935 -8378353 + AluSx SINE Alu 1 312 0 381 207 11 0 chr10 137210938 137211025 -8378263 + L1MDa LINE L1 1905 1992 -4548 1926 121 0 16 chr10 137211217 137211530 -8377758 - AluSg SINE Alu 0 310 3 24 0 0 0 chr10 137211544 137211568 -8377720 + AT_rich Low_complexity Low_complexity 1 24 0 333 238 40 56 chr10 137211591 137211717 -8377571 - MIR SINE MIR 0 262 139 23 0 0 0 chr10 137211765 137211788 -8377500 + AT_rich Low_complexity Low_complexity 1 23 0 677 189 0 8 chr10 137211797 137211924 -8377364 - AluSg/x SINE Alu -27 285 160 905 188 5 10 chr10 137211927 137212119 -8377169 - AluY SINE Alu -38 273 83 1445 121 0 0 chr10 137212231 137212430 -8376858 + AluSq SINE Alu 110 308 -5 1419 167 36 43 chr10 137212486 137212646 -8376642 - MER7A DNA MER2_type -2765 273 116 1593 146 19 65 chr10 137212646 137212954 -8376334 - AluJb SINE Alu -14 298 5 1419 167 36 43 chr10 137212954 137213069 -8376219 - MER7A DNA MER2_type -2922 116 2 791 165 13 6 chr10 137213106 137213264 -8376024 + AluSq SINE Alu 72 230 -83 618 185 164 14 chr10 137213524 137213670 -8375618 - FRAM SINE Alu -4 172 5 249 347 42 0 chr10 137213675 137213770 -8375518 + L2 LINE L2 3210 3308 -5 1372 161 0 24 chr10 137214070 137214318 -8374970 + AluJo SINE Alu 1 242 -70 639 104 10 10 chr10 137214326 137214422 -8374866 + AluS SINE Alu 5 100 -213 1929 155 0 26 chr10 137214597 137214900 -8374388 + AluJb SINE Alu 1 295 -17 2542 83 0 0 chr10 137214902 137215215 -8374073 + AluSp SINE Alu 1 313 0 223 37 0 0 chr10 137215330 137215357 -8373931 + (TTTA)n Simple_repeat Simple_repeat 2 100 0 2167 82 18 4 chr10 137215357 137215637 -8373651 - AluSx SINE Alu -1 310 1 695 140 0 0 chr10 137215703 137215803 -8373485 - MER30 DNA MER1_type 0 230 131 1554 70 0 0 chr10 137215803 137216002 -8373286 - AluSp SINE Alu -12 301 103 1345 216 3 10 chr10 137217229 137217530 -8371758 - AluJo SINE Alu -13 299 1 1581 157 23 26 chr10 137217974 137218280 -8371008 + AluJo SINE Alu 4 308 -4 918 281 36 67 chr10 137218291 137218361 -8370927 + L1MEc LINE L1 876 947 -5449 2301 77 3 10 chr10 137218361 137218673 -8370615 + AluY SINE Alu 1 310 -1 918 281 36 67 chr10 137218673 137219214 -8370074 + L1MEc LINE L1 947 1468 -4928 1699 134 0 23 chr10 137219216 137219515 -8369773 + AluSx SINE Alu 1 292 -20 1556 94 24 147 chr10 137219692 137220033 -8369255 + AluYb8 SINE Alu 1 299 -9 705 140 84 0 chr10 137220779 137220886 -8368402 + AluSx SINE Alu 3 118 -194 1346 166 4 15 chr10 137220886 137221145 -8368143 + AluSp SINE Alu 30 285 -28 748 238 0 0 chr10 137221166 137221326 -8367962 + AluSx SINE Alu 123 282 -28 24 0 0 0 chr10 137221497 137221521 -8367767 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr10 137221572 137221594 -8367694 + AT_rich Low_complexity Low_complexity 1 22 0 2477 156 30 5 chr10 137221703 137222134 -8367154 + L1MC1 LINE L1 5555 5996 -337 229 244 122 0 chr10 137222318 137222408 -8366880 + MIR SINE MIR 22 122 -140 1114 196 117 6 chr10 137222425 137222741 -8366547 - L1ME2 LINE L1 0 6164 5814 1532 182 43 7 chr10 137222757 137223037 -8366251 - AluJo SINE Alu -10 292 3 1149 175 0 9 chr10 137223093 137223321 -8365967 - AluSx SINE Alu -82 230 5 270 281 31 16 chr10 137223332 137223460 -8365828 - L1ME2 LINE L1 -393 5771 5642 259 326 67 11 chr10 137223572 137223750 -8365538 + LTR16B LTR ERVL 126 313 -151 496 227 0 9 chr10 137223891 137224001 -8365287 + AluJb SINE Alu 190 298 -14 1150 175 0 111 chr10 137224001 137224204 -8365084 - L1M4 LINE L1 -483 6089 5924 1874 144 0 10 chr10 137224204 137224510 -8364778 + AluSx SINE Alu 1 303 -9 1150 175 0 111 chr10 137224510 137224586 -8364702 - L1M4 LINE L1 -648 5924 5841 788 207 68 9 chr10 137224585 137224807 -8364481 - L1M4 LINE L1 -3959 2762 2528 * 1606 109 0 4 chr10 137224809 137225047 -8364241 - AluSq SINE Alu -4 309 73 2431 59 0 0 chr10 137225047 137225348 -8363940 - AluY SINE Alu -8 303 1 557 141 0 0 chr10 137225348 137225433 -8363855 - AluSq SINE Alu -226 86 2 841 233 93 84 chr10 137225439 137226010 -8363278 - L1M4 LINE L1 -4060 2480 1905 1045 89 0 129 chr10 137226013 137226215 -8363073 - AluSx SINE Alu 0 310 135 3946 145 44 18 chr10 137226315 137226997 -8362291 + Tigger1 DNA MER2_type 1527 2226 -192 2087 107 0 3 chr10 137226997 137227288 -8362000 - AluSg SINE Alu -20 290 1 871 140 0 15 chr10 137227288 137227424 -8361864 - AluSx SINE Alu -179 134 1 1131 139 24 57 chr10 137227426 137227453 -8361835 + Tigger1 DNA MER2_type 2217 2243 -175 2274 92 3 0 chr10 137227453 137227758 -8361530 - AluSp SINE Alu -6 307 2 1131 139 24 57 chr10 137227758 137227939 -8361349 + Tigger1 DNA MER2_type 2243 2418 0 671 280 29 10 chr10 137227945 137228152 -8361136 + L2 LINE L2 2291 2501 -813 180 152 0 0 chr10 137228161 137228194 -8361094 + (TA)n Simple_repeat Simple_repeat 2 34 0 1449 195 38 0 chr10 137228195 137228487 -8360801 - AluJo SINE Alu 0 312 10 419 308 30 38 chr10 137228497 137228630 -8360658 + L2 LINE L2 2519 2650 -664 913 105 0 0 chr10 137228730 137228854 -8360434 + AluY SINE Alu 170 293 -18 8215 130 26 41 chr10 137228855 137229390 -8359898 - Tigger1 DNA MER2_type -1037 1381 840 2217 103 6 3 chr10 137229390 137229701 -8359587 - AluSx SINE Alu 0 312 1 8215 130 26 41 chr10 137229701 137230158 -8359130 - Tigger1 DNA MER2_type -1578 840 412 1567 132 6 112 chr10 137230158 137230506 -8358782 - AluSx SINE Alu -1 311 1 8215 130 26 41 chr10 137230506 137230913 -8358375 - Tigger1 DNA MER2_type -2006 412 1 345 274 0 0 chr10 137230915 137230988 -8358300 - L2 LINE L2 -1031 2283 2211 2192 86 0 25 chr10 137231064 137231378 -8357910 + AluY SINE Alu 5 310 -1 27 81 0 0 chr10 137231765 137231827 -8357461 + AT_rich Low_complexity Low_complexity 1 62 0 351 164 0 0 chr10 137232658 137232736 -8356552 - AluJo SINE Alu 0 302 234 1944 135 3 10 chr10 137232736 137233039 -8356249 - AluSx SINE Alu -11 301 1 1520 136 0 20 chr10 137233039 137233290 -8355998 - AluJo SINE Alu -66 246 1 633 273 31 89 chr10 137233590 137233686 -8355602 - L2 LINE L2 -5 3308 3208 503 239 0 63 chr10 137233686 137233828 -8355460 + FLAM_A SINE Alu 1 133 0 633 273 31 89 chr10 137233828 137234057 -8355231 - L2 LINE L2 -105 3208 3002 503 312 21 16 chr10 137234057 137234353 -8354935 - LTR16A LTR ERVL 0 450 100 638 285 205 32 chr10 137234421 137234735 -8354553 - L2 LINE L2 -312 3001 2635 764 236 72 29 chr10 137234736 137234944 -8354344 - MER20 DNA MER1_type -2 217 1 182 83 0 0 chr10 137234971 137234995 -8354293 - L2 LINE L2 -710 2604 2581 193 250 47 0 chr10 137235030 137235094 -8354194 + L2 LINE L2 2672 2738 -576 1259 110 81 76 chr10 137235151 137235387 -8353901 - AluSx SINE Alu -3 309 73 2089 91 40 9 chr10 137235387 137235776 -8353512 + LTR7 LTR ERV1 1 449 -1 419 71 12 95 chr10 137235776 137235860 -8353428 - AluSx SINE Alu -235 78 2 2223 86 0 0 chr10 137235873 137236175 -8353113 - AluY SINE Alu -9 302 1 2501 61 0 0 chr10 137236187 137236498 -8352790 - AluSp SINE Alu -2 311 1 663 199 7 91 chr10 137238448 137238579 -8350709 - MER58B DNA MER1_type -2095 325 185 2022 90 4 0 chr10 137238579 137238846 -8350442 + AluSp SINE Alu 1 268 -45 663 199 7 91 chr10 137238846 137238949 -8350339 - MER58B DNA MER1_type -2235 185 2 712 202 0 0 chr10 137239043 137239162 -8350126 - FLAM_C SINE Alu -14 119 1 607 166 159 0 chr10 137239223 137239386 -8349902 - MER53 DNA DNA 0 189 1 2145 121 0 3 chr10 137239661 137239974 -8349314 - AluSx SINE Alu 0 312 1 1894 141 13 13 chr10 137240124 137240436 -8348852 - AluSx SINE Alu 0 312 1 2416 64 0 0 chr10 137240441 137240739 -8348549 - AluY SINE Alu -13 298 1 392 268 108 2 chr10 137240743 137240943 -8348345 - L1ME3 LINE L1 -5 6234 6001 * 1476 184 75 41 chr10 137240934 137241045 -8348243 - L1ME3 LINE L1 -743 5472 5366 2241 94 0 7 chr10 137241045 137241352 -8347936 - AluSx SINE Alu -7 305 1 1476 184 75 41 chr10 137241352 137241690 -8347598 - L1ME3 LINE L1 -849 5366 5082 2035 134 0 0 chr10 137241690 137241997 -8347291 - AluSg SINE Alu -3 307 1 1955 141 0 0 chr10 137242016 137242315 -8346973 - AluSx SINE Alu -13 299 1 1050 179 76 131 chr10 137242315 137242841 -8346447 - L1ME3 LINE L1 -2972 3243 2747 2065 114 4 0 chr10 137242841 137243144 -8346144 + AluSp SINE Alu 2 305 0 963 140 0 19 chr10 137243160 137243317 -8345971 + AluJb SINE Alu 145 298 -14 1271 154 0 111 chr10 137243317 137243520 -8345768 - L1M4 LINE L1 -483 5695 5530 1966 131 0 10 chr10 137243520 137243826 -8345462 + AluSx SINE Alu 1 303 -9 1271 154 0 111 chr10 137243826 137243902 -8345386 - L1M4 LINE L1 -648 5530 5447 752 213 68 5 chr10 137243901 137244122 -8345166 - L1ME3 LINE L1 -3959 2437 2203 * 1414 139 0 4 chr10 137244124 137244362 -8344926 - AluSq SINE Alu -4 309 73 1349 106 0 0 chr10 137244362 137244542 -8344746 - AluSg/x SINE Alu -10 302 123 401 174 196 0 chr10 137244788 137244880 -8344408 - MER81 DNA DNA -1 113 4 746 255 45 32 chr10 137245538 137245785 -8343503 + MIR SINE MIR 13 262 0 1988 120 3 0 chr10 137246002 137246301 -8342987 - AluSq SINE Alu -13 300 1 2176 106 0 3 chr10 137246333 137246636 -8342652 + AluSx SINE Alu 1 302 -10 496 235 0 76 chr10 137246640 137246727 -8342561 + MER3 DNA MER1_type 48 140 -22 1189 169 6 148 chr10 137246727 137246900 -8342388 - AluJo SINE Alu -13 289 93 1968 84 0 4 chr10 137246900 137247161 -8342127 + AluSq SINE Alu 1 260 -53 1189 169 6 148 chr10 137247161 137247196 -8342092 - AluJo SINE Alu -209 93 55 1998 82 37 0 chr10 137247196 137247496 -8341792 + AluSg SINE Alu 1 310 0 1189 169 6 148 chr10 137247496 137247620 -8341668 - AluJo SINE Alu -247 55 1 496 235 0 76 chr10 137247620 137247664 -8341624 + MER3 DNA MER1_type 139 122 -40 297 282 97 16 chr10 137247723 137247847 -8341441 - MIR3 SINE MIR -60 148 15 246 270 27 0 chr10 137248529 137248603 -8340685 + CT-rich Low_complexity Low_complexity 3 78 0 531 233 0 0 chr10 137248614 137248717 -8340571 - L1ME3A LINE L1 -4 6235 6133 1060 138 5 16 chr10 137248721 137248739 -8340549 + AluSg/x SINE Alu 118 135 -177 1534 107 4 45 chr10 137248739 137248983 -8340305 + AluSx SINE Alu 1 234 -78 1664 80 4 52 chr10 137248983 137249234 -8340054 + AluSc SINE Alu 28 266 -43 1060 138 5 16 chr10 137249234 137249403 -8339885 + AluSg/x SINE Alu 133 304 -8 2253 91 3 0 chr10 137249494 137249791 -8339497 + AluSp SINE Alu 1 298 -15 268 184 0 0 chr10 137249819 137249868 -8339420 - L1ME3A LINE L1 -285 5954 5906 933 244 65 37 chr10 137249877 137250317 -8338971 - L1ME3A LINE L1 -408 5831 5323 198 246 0 0 chr10 137250324 137250385 -8338903 + (TATATG)n Simple_repeat Simple_repeat 3 63 0 366 258 100 48 chr10 137250401 137250424 -8338864 - L1ME3A LINE L1 -923 5292 5272 1458 175 48 14 chr10 137250424 137250715 -8338573 - AluJo SINE Alu -11 301 1 366 258 100 48 chr10 137250715 137250962 -8338326 - L1ME3A LINE L1 -943 5272 5008 1119 159 0 50 chr10 137251004 137251224 -8338064 + AluJb SINE Alu 86 294 -18 2208 94 7 0 chr10 137251327 137251634 -8337654 - AluSx SINE Alu -3 309 1 647 228 101 48 chr10 137251648 137251876 -8337412 - L1ME3A LINE L1 -1387 4828 4589 1391 68 6 0 chr10 137251908 137252084 -8337204 - AluSq SINE Alu -26 287 111 450 86 0 0 chr10 137252084 137252154 -8337134 + AluSp/q SINE Alu 241 310 -3 1813 127 3 27 chr10 137252221 137252513 -8336775 + AluSx SINE Alu 1 285 -27 405 0 0 0 chr10 137252520 137252565 -8336723 + (CATA)n Simple_repeat Simple_repeat 2 46 0 1399 158 24 95 chr10 137252654 137252990 -8336298 - AluJb SINE Alu 0 312 1 1029 272 27 16 chr10 137253055 137253426 -8335862 - L1ME3A LINE L1 -2252 3963 3589 1119 143 39 120 chr10 137253454 137253712 -8335576 - AluJo SINE Alu -75 237 1 1495 173 14 0 chr10 137253724 137254008 -8335280 - AluJo SINE Alu -24 288 1 476 254 90 16 chr10 137254011 137254200 -8335088 - L1ME3A LINE L1 -2982 3233 3031 * 1984 249 32 113 chr10 137254195 137254344 -8334944 - L1ME3A LINE L1 -4578 1818 1658 771 189 8 0 chr10 137254344 137254476 -8334812 - FLAM_A SINE Alu 0 133 1 1984 249 32 113 chr10 137254476 137254532 -8334756 - L1ME3A LINE L1 -4738 1658 1599 2096 98 48 0 chr10 137254532 137254827 -8334461 - AluSq SINE Alu -4 309 1 1984 249 32 113 chr10 137254827 137255044 -8334244 - L1ME3A LINE L1 -4797 1599 1366 1952 107 0 20 chr10 137255044 137255342 -8333946 - AluSx SINE Alu -20 292 1 1984 249 32 113 chr10 137255342 137255885 -8333403 - L1ME3A LINE L1 -5030 1366 780 2368 74 7 0 chr10 137255885 137256194 -8333094 - AluY SINE Alu 0 311 1 1984 249 32 113 chr10 137256194 137256274 -8333014 - L1ME3A LINE L1 -5616 780 887 1783 134 23 26 chr10 137256274 137256579 -8332709 - AluJo SINE Alu -8 304 1 1984 249 32 113 chr10 137256579 137256791 -8332497 - L1ME3A LINE L1 -5508 888 660 2066 70 35 17 chr10 137256828 137257115 -8332173 + AluY SINE Alu 1 292 -19 264 208 26 0 chr10 137257115 137257192 -8332096 + Charlie1 DNA MER1_type 2564 2642 -119 659 162 17 17 chr10 137257196 137257313 -8331975 + FLAM_C SINE Alu 3 119 -24 216 0 0 0 chr10 137257321 137257345 -8331943 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 578 178 31 31 chr10 137257348 137257477 -8331811 + Charlie1 DNA MER1_type 2632 2760 -1 30 0 0 0 chr10 137257487 137257517 -8331771 + AT_rich Low_complexity Low_complexity 1 30 0 1279 171 73 97 chr10 137257680 137257711 -8331577 - Charlie1b DNA MER1_type -2425 336 306 1857 145 7 0 chr10 137257711 137258007 -8331281 - AluSx SINE Alu -14 298 1 1279 171 73 97 chr10 137258007 137258219 -8331069 - Charlie1b DNA MER1_type -2455 306 101 2088 113 3 0 chr10 137258219 137258512 -8330776 - AluSx SINE Alu -18 294 1 1279 171 73 97 chr10 137258512 137258607 -8330681 - Charlie1b DNA MER1_type -2660 101 5 1705 181 0 0 chr10 137258851 137259143 -8330145 - AluJo SINE Alu -20 292 1 1691 154 46 0 chr10 137259148 137259428 -8329860 - AluSg SINE Alu -17 293 1 377 77 24 0 chr10 137259530 137259604 -8329684 + Alu SINE Alu 1 55 -245 2048 17 0 4 chr10 137260292 137260531 -8328757 + AluYb8 SINE Alu 68 305 -13 1194 251 60 9 chr10 137260665 137261000 -8328288 - L2 LINE L2 -4 3309 2958 2344 69 3 22 chr10 137261192 137261509 -8327779 + AluY SINE Alu 1 311 0 2518 46 0 3 chr10 137262205 137262512 -8326776 + AluY SINE Alu 2 307 -4 1920 63 0 0 chr10 137262544 137262781 -8326507 + AluSq SINE Alu 1 237 -76 2400 50 0 3 chr10 137263352 137263649 -8325639 - AluY SINE Alu -15 296 1 205 261 174 33 chr10 137263649 137263741 -8325547 - L2 LINE L2 -8 3305 3201 2411 86 0 0 chr10 137264022 137264335 -8324953 + AluSp SINE Alu 1 313 0 2001 89 18 4 chr10 137264452 137264759 -8324529 - AluSx SINE Alu 0 311 1 1406 98 54 27 chr10 137264825 137264925 -8324363 - MER30 DNA MER1_type 0 230 134 2351 76 0 0 chr10 137264925 137265226 -8324062 - AluSp SINE Alu -12 301 1 1406 98 54 27 chr10 137265226 137265349 -8323939 - MER30 DNA MER1_type -96 134 1 1566 196 3 3 chr10 137265419 137265710 -8323578 + AluJo SINE Alu 3 293 -19 2291 102 0 0 chr10 137265756 137266050 -8323238 - AluSc SINE Alu -11 298 5 657 194 13 32 chr10 137266190 137266345 -8322943 - AluSg/x SINE Alu -5 305 154 2303 74 27 3 chr10 137267157 137267453 -8321835 + AluY SINE Alu 3 305 -6 2275 92 0 35 chr10 137267663 137267978 -8321310 + AluY SINE Alu 1 304 -7 2199 95 3 7 chr10 137267987 137268294 -8320994 - AluSp SINE Alu 0 306 1 1840 158 28 0 chr10 137268586 137268877 -8320411 + AluJo SINE Alu 1 299 -13 2364 90 3 0 chr10 137269137 137269436 -8319852 + AluSx SINE Alu 1 300 -12 2180 116 7 0 chr10 137270204 137270507 -8318781 - AluSq SINE Alu -8 305 1 2026 123 38 7 chr10 137270565 137270858 -8318430 - AluSx SINE Alu -10 302 1 189 0 0 0 chr10 137270858 137270879 -8318409 + (TTTA)n Simple_repeat Simple_repeat 4 24 0 2192 106 11 0 chr10 137270880 137271162 -8318126 - AluSg SINE Alu -25 285 1 654 87 78 0 chr10 137271177 137271280 -8318008 - HY1 scRNA scRNA -1 111 1 2433 71 0 7 chr10 137271414 137271711 -8317577 - AluY SINE Alu -16 295 1 2494 68 0 13 chr10 137272110 137272418 -8316870 - AluSg SINE Alu -6 304 1 727 176 74 27 chr10 137273210 137273358 -8315930 - MER44D DNA MER2_type 0 605 451 424 118 284 10 chr10 137273363 137273465 -8315823 - MER44D DNA MER2_type -209 400 1 2506 80 0 0 chr10 137274332 137274634 -8314654 + AluY SINE Alu 1 302 -9 516 286 53 35 chr10 137274647 137274818 -8314470 - MIR3 SINE MIR -19 189 16 287 287 129 10 chr10 137275016 137275117 -8314171 + MIR SINE MIR 37 149 -113 997 115 0 19 chr10 137275864 137276020 -8313268 + AluSg/x SINE Alu 154 306 -4 2120 113 27 13 chr10 137276691 137276991 -8312297 - AluSx SINE Alu -8 304 1 1942 158 3 3 chr10 137277119 137277429 -8311859 - AluJb SINE Alu -1 311 2 587 263 81 49 chr10 137277449 137277502 -8311786 + L1P4 LINE L1 5315 5365 -801 2129 124 0 7 chr10 137277502 137277808 -8311480 + AluY SINE Alu 1 304 -7 587 263 81 49 chr10 137277808 137278058 -8311230 + L1P4 LINE L1 5365 5631 -535 497 270 130 20 chr10 137278110 137278310 -8310978 - MIR SINE MIR -17 245 24 400 278 128 59 chr10 137278351 137278538 -8310750 + L1MC4a LINE L1 5729 5930 -312 2269 107 3 0 chr10 137278728 137279026 -8310262 + AluSx SINE Alu 1 299 -13 1562 165 68 0 chr10 137280127 137280419 -8308869 - AluJo SINE Alu 0 310 1 2028 128 26 7 chr10 137280472 137280776 -8308512 + AluSx SINE Alu 2 311 -1 2250 113 13 3 chr10 137281256 137281557 -8307731 + AluSx SINE Alu 1 304 -8 21 0 0 0 chr10 137281846 137281867 -8307421 + AT_rich Low_complexity Low_complexity 1 21 0 385 311 25 0 chr10 137281992 137282111 -8307177 - MER5A DNA MER1_type -5 184 63 237 286 18 0 chr10 137282107 137282163 -8307125 + MER5A DNA MER1_type 107 163 -26 * 588 209 72 13 chr10 137282280 137282296 -8306992 - L1MA10 LINE L1 -2 6332 6317 1381 245 82 32 chr10 137282296 137282761 -8306527 - L1ME2 LINE L1 -10 6154 5667 2028 102 69 0 chr10 137283049 137283324 -8305964 + AluSc SINE Alu 1 294 -15 1983 95 4 11 chr10 137283380 137283642 -8305646 - AluSx SINE Alu -15 297 38 759 191 68 12 chr10 137284400 137284562 -8304726 - FRAM SINE Alu 0 176 6 2123 93 7 31 chr10 137284579 137284891 -8304397 - AluSx SINE Alu 0 305 1 203 329 0 14 chr10 137286141 137286211 -8303077 - L2 LINE L2 -2 3270 3202 1875 176 0 3 chr10 137286380 137286682 -8302606 + AluJo SINE Alu 1 301 -11 2177 95 29 44 chr10 137288060 137288376 -8300912 - AluSx SINE Alu -1 311 1 2252 106 10 0 chr10 137288780 137289081 -8300207 + AluSx SINE Alu 1 304 -8 2456 97 0 0 chr10 137289083 137289393 -8299895 + AluSg SINE Alu 1 310 0 1929 137 17 10 chr10 137289402 137289695 -8299593 + AluJb SINE Alu 1 295 -17 278 198 129 10 chr10 137289886 137289987 -8299301 + L1ME4a LINE L1 5998 6110 -11 304 261 56 83 chr10 137290359 137290539 -8298749 + MIR SINE MIR 23 197 -65 23 0 0 0 chr10 137291865 137291888 -8297400 + AT_rich Low_complexity Low_complexity 1 23 0 371 188 86 26 chr10 137294190 137294307 -8294981 + L1ME4a LINE L1 5697 5820 -301 840 123 0 0 chr10 137294334 137294448 -8294840 + AluJb SINE Alu 5 118 -194 2251 94 7 0 chr10 137294472 137294758 -8294530 + AluSx SINE Alu 11 298 -14 292 186 78 70 chr10 137294857 137294986 -8294302 + L1ME4a LINE L1 5962 6091 -30 2344 104 0 0 chr10 137295443 137295742 -8293546 - AluSx SINE Alu -13 299 1 2355 86 3 3 chr10 137296036 137296340 -8292948 + AluSx SINE Alu 1 304 -8 2417 66 0 0 chr10 137296567 137296853 -8292435 - AluSx SINE Alu -26 286 1 1738 156 48 0 chr10 137297038 137297331 -8291957 - AluJo SINE Alu 0 306 1 2296 84 0 20 chr10 137297357 137297655 -8291633 + AluSq SINE Alu 1 292 -21 2118 110 10 0 chr10 137297802 137298093 -8291195 - AluSg SINE Alu -16 294 1 460 255 102 9 chr10 137298093 137298309 -8290979 + L1MC4 LINE L1 7806 8041 -1 1559 91 24 147 chr10 137298472 137298813 -8290475 + AluYb8 SINE Alu 1 299 -9 1773 142 71 3 chr10 137299559 137299666 -8289622 + AluSx SINE Alu 3 101 -211 2075 89 4 0 chr10 137299666 137299949 -8289339 + AluSp SINE Alu 30 313 0 1773 142 71 3 chr10 137299949 137300121 -8289167 + AluSx SINE Alu 101 303 -9 22 0 0 0 chr10 137300347 137300369 -8288919 + AT_rich Low_complexity Low_complexity 1 22 0 2360 90 20 0 chr10 137300459 137300760 -8288528 + AluSq SINE Alu 1 307 -6 2574 62 0 0 chr10 137300915 137301223 -8288065 - AluY SINE Alu -3 308 1 1225 89 6 0 chr10 137301309 137301466 -8287822 + AluY SINE Alu 130 287 -24 759 191 68 12 chr10 137302269 137302431 -8286857 - FRAM SINE Alu 0 176 6 2123 93 7 31 chr10 137302448 137302760 -8286528 - AluSx SINE Alu 0 305 1 203 329 0 14 chr10 137304010 137304080 -8285208 - L2 LINE L2 -2 3270 3202 1875 176 0 3 chr10 137304249 137304551 -8284737 + AluJo SINE Alu 1 301 -11 2162 96 29 45 chr10 137305929 137306243 -8283045 - AluSx SINE Alu -3 309 1 2252 106 10 0 chr10 137306647 137306948 -8282340 + AluSx SINE Alu 1 304 -8 2477 93 0 0 chr10 137306950 137307260 -8282028 + AluSg SINE Alu 1 310 0 1914 140 17 10 chr10 137307269 137307562 -8281726 + AluJb SINE Alu 1 295 -17 278 198 129 10 chr10 137307753 137307854 -8281434 + L1ME4a LINE L1 5998 6110 -11 304 261 56 83 chr10 137308226 137308406 -8280882 + MIR SINE MIR 23 197 -65 23 0 0 0 chr10 137309732 137309755 -8279533 + AT_rich Low_complexity Low_complexity 1 23 0 371 188 86 26 chr10 137312056 137312173 -8277115 + L1ME4a LINE L1 5697 5820 -301 840 123 0 0 chr10 137312200 137312314 -8276974 + AluJb SINE Alu 5 118 -194 2251 94 7 0 chr10 137312338 137312624 -8276664 + AluSx SINE Alu 11 298 -14 292 186 78 70 chr10 137312723 137312852 -8276436 + L1ME4a LINE L1 5962 6091 -30 2469 80 0 0 chr10 137313309 137313608 -8275680 - AluSx SINE Alu -13 299 1 2083 84 0 4 chr10 137313643 137313904 -8275384 - AluSq SINE Alu -53 260 1 903 210 13 0 chr10 137313920 137314077 -8275211 + AluJb SINE Alu 131 289 -23 312 282 0 47 chr10 137314079 137314164 -8275124 - Charlie5 DNA MER1_type -2531 81 1 2307 106 0 3 chr10 137314168 137314471 -8274817 - AluSx SINE Alu -10 302 1 2016 128 7 0 chr10 137314503 137314801 -8274487 + AluSq SINE Alu 1 300 -13 646 259 45 32 chr10 137315018 137315265 -8274023 - MIR SINE MIR 0 262 13 395 174 196 0 chr10 137315923 137316015 -8273273 + MER81 DNA DNA 4 113 -1 982 135 0 0 chr10 137316281 137316414 -8272874 + AluJo/FLAM SINE Alu 1 133 -179 2389 73 0 0 chr10 137316415 137316703 -8272585 - AluY SINE Alu -19 292 5 22 0 0 0 chr10 137316708 137316730 -8272558 + AT_rich Low_complexity Low_complexity 1 22 0 2367 76 21 0 chr10 137316786 137317074 -8272214 - AluSx SINE Alu -18 294 1 22 0 0 0 chr10 137317164 137317186 -8272102 + AT_rich Low_complexity Low_complexity 1 22 0 1744 149 71 3 chr10 137317412 137317584 -8271704 - AluSx SINE Alu -9 303 144 185 0 40 0 chr10 137317584 137317609 -8271679 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 2089 89 4 0 chr10 137317610 137317867 -8271421 - AluSp SINE Alu -26 287 30 1744 149 71 3 chr10 137317867 137317974 -8271314 - AluSx SINE Alu -167 145 3 1754 158 4 0 chr10 137318722 137318981 -8270307 + AluSx SINE Alu 49 308 -4 257 256 0 0 chr10 137319511 137319593 -8269695 + C-rich Low_complexity Low_complexity 1 82 0 204 422 0 0 chr10 137319650 137319766 -8269522 + C-rich Low_complexity Low_complexity 1 116 0 * 394 268 12 26 chr10 137319699 137320135 -8269153 + CT-rich Low_complexity Low_complexity 1 429 0 2052 62 8 8 chr10 137320292 137320552 -8268736 - AluY SINE Alu -51 260 1 216 81 32 81 chr10 137320672 137320734 -8268554 + (TTCTC)n Simple_repeat Simple_repeat 3 61 0 350 327 6 41 chr10 137320779 137320983 -8268305 + CT-rich Low_complexity Low_complexity 1 196 0 358 308 117 32 chr10 137321036 137321283 -8268005 - L1M4c LINE L1 -5170 1214 947 341 254 102 42 chr10 137321278 137321470 -8267818 - L1MEd LINE L1 -2962 3167 988 * 660 261 48 5 chr10 137321620 137321808 -8267480 + L2 LINE L2 3114 3309 -4 283 100 0 0 chr10 137323495 137323535 -8265753 - U2 snRNA snRNA -147 41 2 572 208 0 9 chr10 137323689 137323795 -8265493 - FRAM SINE Alu -80 96 1 260 318 17 40 chr10 137325141 137325314 -8263974 + AluSp SINE Alu 13 181 -122 313 167 0 0 chr10 137325743 137325791 -8263497 - Alu SINE Alu -254 48 1 1812 164 21 0 chr10 137326199 137326485 -8262803 - AluSq SINE Alu -21 292 1 431 316 121 24 chr10 137326953 137326978 -8262310 - MIR SINE MIR -20 242 221 2108 142 0 16 chr10 137326978 137327295 -8261993 - AluSx SINE Alu 0 312 1 431 316 121 24 chr10 137327295 137327475 -8261813 - MIR SINE MIR -41 221 17 262 343 9 29 chr10 137328197 137328302 -8260986 - L2 LINE L2 -205 3067 2965 235 363 75 36 chr10 137328392 137328698 -8260590 - L2 LINE L2 -498 2816 2499 337 271 12 12 chr10 137329363 137329448 -8259840 - L1MC4 LINE L1 -1344 6698 6614 244 319 0 0 chr10 137329739 137329808 -8259480 + MER82 DNA MER2_type 2 70 -583 423 0 0 0 chr10 137329850 137329897 -8259391 + (TA)n Simple_repeat Simple_repeat 1 47 0 1922 229 32 5 chr10 137329897 137330334 -8258954 + MER82 DNA MER2_type 205 653 0 213 312 0 0 chr10 137330337 137330414 -8258874 + L2 LINE L2 3156 3232 -81 358 272 51 94 chr10 137330768 137331022 -8258266 - L1MC4a LINE L1 -709 7099 6857 5501 175 30 15 chr10 137331332 137332485 -8256803 - Tigger1 DNA MER2_type -12 2406 1236 1253 143 36 43 chr10 137332638 137332918 -8256370 - AluSx SINE Alu -27 285 8 204 315 151 0 chr10 137333045 137333159 -8256129 + MIR SINE MIR 82 224 -38 1986 188 21 16 chr10 137333159 137333547 -8255741 + MLT1B LTR MaLR 1 390 0 204 315 151 0 chr10 137333547 137333578 -8255710 + MIR SINE MIR 224 249 -13 231 273 18 0 chr10 137335866 137335921 -8253367 - MIR SINE MIR -85 123 68 1389 157 0 88 chr10 137337676 137337995 -8251293 - AluJb SINE Alu 0 312 22 800 184 27 22 chr10 137339167 137339352 -8249936 - MER20 DNA MER1_type 0 219 34 1804 141 33 33 chr10 137341467 137341772 -8247516 + AluSx SINE Alu 2 306 -6 1900 153 17 3 chr10 137342160 137342455 -8246833 - AluJb SINE Alu -13 299 1 680 275 53 5 chr10 137342894 137343101 -8246187 + MIR SINE MIR 25 241 -21 1844 154 35 3 chr10 137343149 137343459 -8245829 - AluJb SINE Alu 0 325 7 22 0 0 0 chr10 137343473 137343495 -8245793 + AT_rich Low_complexity Low_complexity 1 22 0 543 101 22 11 chr10 137343643 137343732 -8245556 - AluJ/FRAM SINE Alu -7 305 216 283 196 0 0 chr10 137343734 137343780 -8245508 - Alu SINE Alu -253 46 1 238 266 0 62 chr10 137344175 137344239 -8245049 - L2 LINE L2 -12 3260 3201 195 207 172 35 chr10 137346055 137346142 -8243146 + L3 LINE CR1 1304 1402 -175 2292 106 10 0 chr10 137346581 137346884 -8242404 + AluSx SINE Alu 1 306 -6 920 185 101 0 chr10 137347123 137347312 -8241976 - MLT1A1 LTR MaLR 0 365 158 855 241 0 0 chr10 137347316 137347482 -8241806 - FRAM SINE Alu 0 166 1 1309 119 0 55 chr10 137347495 137347696 -8241592 - AluSq SINE Alu -118 195 6 814 148 7 13 chr10 137347709 137347858 -8241430 - MLT1A1 LTR MaLR -215 150 3 1194 152 77 146 chr10 137349690 137349866 -8239422 + AluJo SINE Alu 1 147 -155 2199 109 7 3 chr10 137349866 137350168 -8239120 + AluSx SINE Alu 1 303 -9 1194 152 77 146 chr10 137350168 137350314 -8238974 + AluJo SINE Alu 147 301 -1 189 200 12 88 chr10 137350913 137350993 -8238295 - L2 LINE L2 -184 3088 3015 2154 128 7 3 chr10 137351058 137351363 -8237925 + AluSx SINE Alu 1 306 -6 2065 213 93 42 chr10 137352268 137352980 -8236308 - L1MD1 LINE L1 0 8042 6126 2150 127 0 29 chr10 137354773 137355088 -8234200 - AluSx SINE Alu -6 306 1 2282 92 0 10 chr10 137355640 137355943 -8233345 - AluY SINE Alu -11 300 1 229 26 53 0 chr10 137356975 137357013 -8232275 + (TG)n Simple_repeat Simple_repeat 2 41 0 2172 92 3 81 chr10 137357590 137357925 -8231363 + AluSx SINE Alu 1 309 -3 21 36 0 0 chr10 137360466 137360494 -8228794 + GC_rich Low_complexity Low_complexity 1 28 0 180 0 0 0 chr10 137362604 137362624 -8226664 + (TTTTC)n Simple_repeat Simple_repeat 2 21 0 261 262 10 29 chr10 137364599 137364702 -8224586 + CT-rich Low_complexity Low_complexity 4 104 0 187 182 36 36 chr10 137364715 137364770 -8224518 - L2 LINE L2 -31 3241 3187 240 232 110 0 chr10 137365778 137365860 -8223428 + MIR SINE MIR 68 159 -49 987 213 93 4 chr10 137367253 137367521 -8221767 - L1M4 LINE L1 -898 5248 4957 339 44 0 0 chr10 137368560 137368605 -8220683 + (TTTG)n Simple_repeat Simple_repeat 1 45 0 1615 125 133 0 chr10 137368642 137368906 -8220382 - AluSx SINE Alu -3 299 1 1208 211 14 22 chr10 137372272 137372547 -8216741 - AluSq SINE Alu -40 273 1 435 86 129 0 chr10 137372593 137372663 -8216625 - AluSg SINE Alu -14 295 217 1107 78 7 7 chr10 137372663 137372804 -8216484 - AluSg SINE Alu -125 185 45 239 219 0 0 chr10 137373950 137373991 -8215297 + AluJ/monomer SINE Alu 1 41 -267 1507 127 18 0 chr10 137373991 137374211 -8215077 + AluSg/x SINE Alu 72 295 -15 426 86 37 221 chr10 137374211 137374290 -8214998 - L1MC3 LINE L1 -32 7753 7661 207 100 0 0 chr10 137374290 137374320 -8214968 + (TTA)n Simple_repeat Simple_repeat 2 31 0 662 235 13 0 chr10 137374320 137374469 -8214819 - FRAM SINE Alu -15 151 1 426 86 37 221 chr10 137374469 137374507 -8214781 - L1MC3 LINE L1 -123 7662 7669 2068 113 7 10 chr10 137374507 137374809 -8214479 - AluSc SINE Alu -8 301 1 426 86 37 221 chr10 137374809 137374852 -8214436 - L1MC3 LINE L1 -115 7670 7621 240 182 0 0 chr10 137374854 137374898 -8214390 - Alu SINE Alu -223 79 36 1835 178 0 7 chr10 137375238 137375536 -8213752 - AluJb SINE Alu -10 302 7 22 0 0 0 chr10 137375550 137375572 -8213716 + AT_rich Low_complexity Low_complexity 1 22 0 540 102 23 0 chr10 137375720 137375808 -8213480 - AluJ/FRAM SINE Alu -7 305 216 292 196 0 0 chr10 137375810 137375856 -8213432 - Alu SINE Alu -256 46 1 227 255 0 0 chr10 137376251 137376298 -8212990 - L2 LINE L2 -12 3260 3214 2304 106 10 0 chr10 137378658 137378961 -8210327 + AluSx SINE Alu 1 306 -6 940 185 101 0 chr10 137379200 137379389 -8209899 - MLT1A1 LTR MaLR 0 365 158 824 235 0 0 chr10 137379393 137379559 -8209729 - FRAM SINE Alu 0 166 1 1314 119 0 55 chr10 137379572 137379773 -8209515 - AluSq SINE Alu -118 195 6 828 148 7 13 chr10 137379786 137379935 -8209353 - MLT1A1 LTR MaLR -215 150 3 1088 152 77 146 chr10 137381771 137381947 -8207341 + AluJo SINE Alu 1 147 -155 2207 109 7 3 chr10 137381947 137382249 -8207039 + AluSx SINE Alu 1 303 -9 1088 152 77 146 chr10 137382249 137382395 -8206893 + AluJo SINE Alu 147 301 -1 2165 128 7 3 chr10 137383139 137383444 -8205844 + AluSx SINE Alu 1 306 -6 2105 213 93 42 chr10 137384349 137385061 -8204227 - L1MD1 LINE L1 0 8042 6126 2159 127 0 29 chr10 137386854 137387169 -8202119 - AluSx SINE Alu -6 306 1 2656 47 0 0 chr10 137387724 137388024 -8201264 - AluY SINE Alu -11 300 1 1274 260 123 34 chr10 137389932 137390418 -8198870 - L1ME LINE L1 -355 5815 5238 1437 194 121 8 chr10 137390418 137390774 -8198514 - MSTD LTR MaLR 0 396 1 1274 260 123 34 chr10 137390774 137391002 -8198286 - L1ME LINE L1 -932 5238 5032 2192 92 34 0 chr10 137391379 137391672 -8197616 + AluSq SINE Alu 2 304 -9 660 236 28 0 chr10 137391865 137392009 -8197279 + MER20 DNA MER1_type 67 214 -5 2007 112 14 27 chr10 137392481 137392775 -8196513 + AluSx SINE Alu 1 290 -22 289 288 127 8 chr10 137396335 137396453 -8192835 + MIR SINE MIR 117 248 -14 1775 169 3 10 chr10 137396454 137396749 -8192539 - AluJb SINE Alu -16 296 4 227 216 81 0 chr10 137397476 137397550 -8191738 - L2 LINE L2 -4 3309 3230 2227 120 0 7 chr10 137397784 137398084 -8191204 + AluSx SINE Alu 1 298 -14 932 123 0 0 chr10 137398094 137398216 -8191072 + AluSq SINE Alu 1 122 -190 1406 125 0 0 chr10 137398254 137398446 -8190842 + AluSq SINE Alu 112 303 -10 201 121 0 0 chr10 137398657 137398690 -8190598 + (TGG)n Simple_repeat Simple_repeat 2 34 0 198 71 0 0 chr10 137398848 137398876 -8190412 + (CCCTG)n Simple_repeat Simple_repeat 3 30 0 203 300 186 36 chr10 137399903 137400043 -8189245 - MIR SINE MIR -50 212 52 2066 105 39 3 chr10 137400875 137401161 -8188127 - AluSx SINE Alu -16 296 1 324 300 112 18 chr10 137401744 137401914 -8187374 - L1ME1 LINE L1 -16 6150 5965 2146 124 6 16 chr10 137403194 137403509 -8185779 - AluSx SINE Alu 0 312 1 2092 149 7 0 chr10 137403518 137403826 -8185462 - AluSx SINE Alu -2 310 1 2057 111 16 26 chr10 137404970 137405277 -8184011 - AluSx SINE Alu -8 304 1 193 308 0 0 chr10 137405394 137405446 -8183842 - MIR SINE MIR -87 121 70 482 281 61 6 chr10 137408195 137408359 -8180929 - MER5B DNA MER1_type -5 173 1 214 265 196 0 chr10 137410061 137410163 -8179125 + MIR SINE MIR 46 167 -95 494 233 7 40 chr10 137411986 137412136 -8177152 + MER104 DNA Tc2 30 174 -6 287 269 94 47 chr10 137412468 137412617 -8176671 + MLT1J2 LTR MaLR 113 268 -182 325 320 39 7 chr10 137412618 137412771 -8176517 + MLT1J1 LTR MaLR 289 446 0 324 247 52 84 chr10 137413092 137413246 -8176042 + LTR16B LTR ERVL 1 149 -315 2227 123 0 10 chr10 137414020 137414329 -8174959 + AluSq SINE Alu 1 306 -7 583 202 52 105 chr10 137415002 137415250 -8174038 - L1ME2 LINE L1 -30 6134 5900 1351 223 68 25 chr10 137415277 137415672 -8173616 - L1ME1 LINE L1 -229 5935 5524 225 0 0 0 chr10 137417424 137417449 -8171839 + (GA)n Simple_repeat Simple_repeat 2 26 0 220 245 3 0 chr10 137418141 137418196 -8171092 - MIR SINE MIR -85 123 68 1120 189 35 161 chr10 137420860 137421488 -8167800 - L1MD2 LINE L1 -1 6358 5810 810 184 82 0 chr10 137423543 137423690 -8165598 + AluJb SINE Alu 132 290 -22 2129 128 0 0 chr10 137423701 137423991 -8165297 + AluSx SINE Alu 11 300 -12 456 281 93 65 chr10 137424564 137424874 -8164414 - L1ME4a LINE L1 -2 6119 5801 335 229 52 21 chr10 137428262 137428358 -8160930 + L2 LINE L2 3170 3268 -4 224 293 83 30 chr10 137428760 137428893 -8160395 - MIR SINE MIR -1 261 122 2298 106 3 0 chr10 137431649 137431951 -8157337 + AluSg SINE Alu 1 303 -7 2406 104 0 0 chr10 137431962 137432270 -8157018 + AluSx SINE Alu 1 308 -4 1228 176 20 36 chr10 137438968 137439218 -8150070 + AluJo SINE Alu 44 289 -23 449 241 9 0 chr10 137439269 137439381 -8149907 + AluJb SINE Alu 194 306 -6 195 188 21 21 chr10 137441053 137441101 -8148187 + L2 LINE L2 3266 3313 0 413 248 68 56 chr10 137442182 137442343 -8146945 + MIR SINE MIR 86 248 -14 511 248 8 15 chr10 137442383 137442516 -8146772 + L1PB4 LINE L1 6012 6143 -13 33 25 0 0 chr10 137443810 137443850 -8145438 + AT_rich Low_complexity Low_complexity 1 40 0 1217 58 0 6 chr10 137445577 137445749 -8143539 + (TC)n Simple_repeat Simple_repeat 2 172 0 2015 103 29 58 chr10 137446243 137446555 -8142733 - AluSx SINE Alu -9 303 1 833 192 28 16 chr10 137449600 137449782 -8139506 - MER20 DNA MER1_type -2 217 34 1957 118 33 33 chr10 137451896 137452201 -8137087 + AluSx SINE Alu 2 306 -6 1880 152 17 7 chr10 137452589 137452885 -8136403 - AluJb SINE Alu -13 299 1 636 266 57 0 chr10 137453339 137453531 -8135757 + MIR SINE MIR 39 241 -21 1851 154 35 3 chr10 137453579 137453889 -8135399 - AluJb SINE Alu 0 325 7 22 0 0 0 chr10 137453903 137453925 -8135363 + AT_rich Low_complexity Low_complexity 1 22 0 540 102 23 0 chr10 137454073 137454161 -8135127 - AluJ/FRAM SINE Alu -7 305 216 292 196 0 0 chr10 137454163 137454209 -8135079 - Alu SINE Alu -262 46 1 227 255 0 0 chr10 137454604 137454651 -8134637 - L2 LINE L2 -12 3260 3214 2304 106 10 0 chr10 137457010 137457313 -8131975 + AluSx SINE Alu 1 306 -6 940 185 101 0 chr10 137457552 137457741 -8131547 - MLT1A1 LTR MaLR 0 365 158 824 235 0 0 chr10 137457746 137457912 -8131376 - FRAM SINE Alu 0 166 1 1314 119 0 55 chr10 137457925 137458126 -8131162 - AluSq SINE Alu -118 195 6 828 148 7 13 chr10 137458139 137458288 -8131000 - MLT1A1 LTR MaLR -215 150 3 1088 152 77 146 chr10 137460123 137460299 -8128989 + AluJo SINE Alu 1 147 -155 2207 109 7 3 chr10 137460299 137460601 -8128687 + AluSx SINE Alu 1 303 -9 1088 152 77 146 chr10 137460601 137460747 -8128541 + AluJo SINE Alu 147 301 -1 2154 131 7 3 chr10 137461491 137461797 -8127491 + AluSx SINE Alu 1 307 -5 2105 213 93 42 chr10 137462702 137463414 -8125874 - L1MD1 LINE L1 0 8042 6126 2132 129 0 31 chr10 137465207 137465524 -8123764 - AluSx SINE Alu -5 307 1 2674 46 0 0 chr10 137466078 137466380 -8122908 - AluY SINE Alu -9 302 1 1258 258 123 34 chr10 137468288 137468774 -8120514 - L1ME LINE L1 -355 5815 5238 1437 194 121 8 chr10 137468774 137469130 -8120158 - MSTD LTR MaLR 0 396 1 1258 258 123 34 chr10 137469130 137469358 -8119930 - L1ME LINE L1 -932 5238 5032 2176 96 34 0 chr10 137469735 137470028 -8119260 + AluSq SINE Alu 2 304 -9 660 236 28 0 chr10 137470221 137470365 -8118923 + MER20 DNA MER1_type 67 214 -5 2023 112 14 27 chr10 137470838 137471132 -8118156 + AluSx SINE Alu 1 290 -22 2100 138 6 22 chr10 137471723 137472041 -8117247 - AluSq SINE Alu 0 313 1 435 86 129 0 chr10 137472087 137472157 -8117131 - AluSg SINE Alu -14 296 218 1107 78 7 7 chr10 137472157 137472298 -8116990 - AluSg SINE Alu -125 185 45 239 219 0 0 chr10 137473443 137473484 -8115804 + AluJ/monomer SINE Alu 1 41 -261 1484 140 14 0 chr10 137473484 137473705 -8115583 + AluSg/x SINE Alu 74 297 -15 426 86 37 221 chr10 137473705 137473784 -8115504 - L1MC3 LINE L1 -32 7753 7661 207 100 0 0 chr10 137473784 137473814 -8115474 + (TTA)n Simple_repeat Simple_repeat 2 31 0 662 235 13 0 chr10 137473814 137473963 -8115325 - FRAM SINE Alu -15 151 1 426 86 37 221 chr10 137473963 137474001 -8115287 - L1MC3 LINE L1 -123 7662 7669 2107 108 0 13 chr10 137474001 137474306 -8114982 - AluSc SINE Alu -8 301 1 426 86 37 221 chr10 137474306 137474349 -8114939 - L1MC3 LINE L1 -115 7670 7621 240 182 0 0 chr10 137474351 137474395 -8114893 - Alu SINE Alu -223 79 36 2147 128 0 7 chr10 137474736 137475040 -8114248 - AluSx SINE Alu -10 302 1 1434 204 63 18 chr10 137476829 137477226 -8112062 - L1MC3 LINE L1 -19 7766 7352 241 292 0 67 chr10 137477621 137477710 -8111578 - MIR SINE MIR -123 139 57 1627 163 4 8 chr10 137478300 137478557 -8110731 - AluJb SINE Alu -56 256 1 2057 131 23 7 chr10 137481484 137481789 -8107499 - AluSx SINE Alu -2 310 1 385 306 117 6 chr10 137482364 137482544 -8106744 + MIR SINE MIR 39 238 -24 349 241 120 23 chr10 137483615 137483748 -8105540 - L3 LINE CR1 -186 1391 1246 354 80 0 0 chr10 137483858 137483908 -8105380 + (CA)n Simple_repeat Simple_repeat 2 51 0 1920 117 0 4 chr10 137484818 137485075 -8104213 - AluSx SINE Alu -56 256 1 1715 138 4 0 chr10 137485469 137485709 -8103579 - AluSx SINE Alu -20 292 52 1233 86 7 0 chr10 137485710 137485862 -8103426 - AluSx SINE Alu -159 153 1 2078 134 0 0 chr10 137488142 137488485 -8100803 - AluSg SINE Alu 0 310 1 902 239 80 60 chr10 137489712 137490182 -8099106 - MLT1E LTR MaLR 0 593 21 1260 204 80 45 chr10 137492280 137492657 -8096631 - MLT1B LTR MaLR 0 390 1 2304 110 0 25 chr10 137492693 137493012 -8096276 - AluSx SINE Alu -1 311 1 316 66 16 49 chr10 137495243 137495304 -8093984 + (TG)n Simple_repeat Simple_repeat 1 59 0 2289 112 0 3 chr10 137497787 137498090 -8091198 - AluSx SINE Alu -10 302 1 1710 136 92 0 chr10 137498555 137498827 -8090461 + AluSx SINE Alu 1 297 -15 707 180 134 94 chr10 137499005 137499355 -8089933 - MLT1A1 LTR MaLR 0 365 2 572 201 104 14 chr10 137499579 137499723 -8089565 - FAM SINE Alu -18 157 1 2370 84 7 7 chr10 137500626 137500936 -8088352 + AluY SINE Alu 1 310 -1 183 42 0 0 chr10 137502372 137502396 -8086892 + (CCCCCA)n Simple_repeat Simple_repeat 1 24 0 1993 135 10 7 chr10 137502981 137503277 -8086011 + AluJb SINE Alu 1 297 -15 321 26 0 0 chr10 137503737 137503775 -8085513 + (TG)n Simple_repeat Simple_repeat 1 38 0 2303 120 3 0 chr10 137503892 137504200 -8085088 - AluSx SINE Alu -3 309 1 466 286 13 13 chr10 137506720 137506874 -8082414 - L1MC4 LINE L1 -384 7658 7505 324 0 0 0 chr10 137507646 137507682 -8081606 + (CA)n Simple_repeat Simple_repeat 2 37 0 2378 94 0 0 chr10 137512835 137513142 -8076146 - AluSx SINE Alu -5 307 1 229 26 53 0 chr10 137514174 137514212 -8075076 + (TG)n Simple_repeat Simple_repeat 2 41 0 2175 92 3 81 chr10 137514789 137515124 -8074164 + AluSx SINE Alu 1 309 -3 21 36 0 0 chr10 137517665 137517693 -8071595 + GC_rich Low_complexity Low_complexity 1 28 0 180 0 0 0 chr10 137519803 137519823 -8069465 + (TTTTC)n Simple_repeat Simple_repeat 2 21 0 261 262 10 29 chr10 137521798 137521901 -8067387 + CT-rich Low_complexity Low_complexity 4 104 0 224 236 83 0 chr10 137522978 137523050 -8066238 + MIR SINE MIR 68 145 -117 987 213 93 4 chr10 137524453 137524721 -8064567 - L1M4 LINE L1 -898 5248 4957 339 44 0 0 chr10 137525760 137525805 -8063483 + (TTTG)n Simple_repeat Simple_repeat 1 45 0 1615 125 133 0 chr10 137525842 137526106 -8063182 - AluSx SINE Alu -3 299 1 1273 166 52 0 chr10 137529874 137530085 -8059203 - AluJo SINE Alu -6 306 85 386 258 126 7 chr10 137530566 137530717 -8058571 + MIR SINE MIR 16 184 -78 955 70 0 0 chr10 137531469 137531584 -8057704 + AluSq/x SINE Alu 1 115 -197 852 111 0 8 chr10 137531584 137531710 -8057578 + AluSc SINE Alu 174 298 -11 227 260 0 0 chr10 137533750 137533800 -8055488 + MER117 DNA MER1_type 110 159 -38 207 0 0 0 chr10 137534106 137534129 -8055159 + (T)n Simple_repeat Simple_repeat 1 23 0 4568 58 3 0 chr10 137535091 137535680 -8053608 - LTR10C LTR ERV1 0 591 1 2208 122 3 3 chr10 137536102 137536398 -8052890 + AluSq SINE Alu 1 296 -17 270 307 8 31 chr10 137536509 137536636 -8052652 - LTR67 LTR ERVL -20 537 414 330 245 19 85 chr10 137547034 137547140 -8042148 + MIR SINE MIR 41 139 -69 198 71 0 0 chr10 137548280 137548308 -8040980 + (A)n Simple_repeat Simple_repeat 1 28 0 830 159 8 0 chr10 137551955 137552087 -8037201 + AluSg/x SINE Alu 140 272 -38 796 186 31 67 chr10 137552554 137552747 -8036541 - MER20 DNA MER1_type 0 219 34 879 246 74 31 chr10 137553359 137553712 -8035576 - MLT1A2 LTR MaLR -3 371 4 2451 77 0 13 chr10 137554006 137554306 -8034982 + AluSc SINE Alu 1 296 -13 1188 221 20 4 chr10 137554311 137554564 -8034724 + AluJb SINE Alu 1 257 -55 28 0 0 0 chr10 137556963 137556991 -8032297 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr10 137557364 137557385 -8031903 + AT_rich Low_complexity Low_complexity 1 21 0 330 132 0 0 chr10 137558025 137558078 -8031210 + (TG)n Simple_repeat Simple_repeat 2 54 0 259 233 89 48 chr10 137560162 137560308 -8028980 + L2 LINE L2 2719 2870 -444 568 207 41 55 chr10 137563446 137563591 -8025697 + AluSq/x SINE Alu 7 149 -164 246 182 296 0 chr10 137564087 137564175 -8025113 + L1ME4a LINE L1 3734 3847 -2299 * 3347 207 30 26 chr10 137564174 137565101 -8024187 + L1ME4a LINE L1 4513 5441 -723 412 197 0 0 chr10 137565103 137565174 -8024114 + FLAM_A SINE Alu 15 85 -57 593 211 8 0 chr10 137565179 137565302 -8023986 - L1M4 LINE L1 -618 5556 5433 771 169 0 0 chr10 137565302 137565432 -8023856 - FLAM_C SINE Alu -3 130 1 1402 141 71 71 chr10 137565457 137565726 -8023562 + AluJo SINE Alu 35 303 -9 1731 147 4 4 chr10 137566612 137566870 -8022418 - AluJb SINE Alu -3 309 52 204 40 0 0 chr10 137567048 137567073 -8022215 + (A)n Simple_repeat Simple_repeat 1 25 0 1635 187 0 27 chr10 137567073 137567373 -8021915 + AluJb SINE Alu 1 292 -20 2452 90 3 3 chr10 137567477 137567788 -8021500 + AluSx SINE Alu 1 311 -1 1897 139 0 11 chr10 137568351 137568618 -8020670 - AluSx SINE Alu -37 275 12 428 304 110 31 chr10 137568837 137569163 -8020125 + L1MC4 LINE L1 7691 8042 0 1388 220 3 3 chr10 137569250 137569532 -8019756 + AluJb SINE Alu 1 282 -30 222 37 0 0 chr10 137569541 137569568 -8019720 + (CAAT)n Simple_repeat Simple_repeat 3 29 0 22 0 0 0 chr10 137570514 137570536 -8018752 + AT_rich Low_complexity Low_complexity 1 22 0 1656 194 3 16 chr10 137570892 137571201 -8018087 + AluJb SINE Alu 1 305 -7 1261 153 9 27 chr10 137571350 137571572 -8017716 + AluJo SINE Alu 81 298 -14 316 260 31 0 chr10 137572569 137572665 -8016623 + L1ME4a LINE L1 5601 5699 -422 1752 124 76 24 chr10 137573224 137573515 -8015773 + AluSx SINE Alu 1 306 -6 1735 151 40 17 chr10 137573787 137574086 -8015202 + AluJb SINE Alu 1 306 -6 749 209 17 17 chr10 137574649 137574826 -8014462 + Charlie4 DNA MER1_type 1785 1961 0 1203 219 123 62 chr10 137575088 137575509 -8013779 + MLT1F1 LTR MaLR 118 564 -3 2113 141 7 0 chr10 137576152 137576458 -8012830 + AluSx SINE Alu 1 308 -4 350 371 94 45 chr10 137576866 137577311 -8011977 + L2 LINE L2 2804 3270 -2 22 35 0 0 chr10 137578618 137578647 -8010641 + AT_rich Low_complexity Low_complexity 1 29 0 207 233 17 17 chr10 137579738 137579798 -8009490 + (TATG)n Simple_repeat Simple_repeat 4 63 0 22 56 0 0 chr10 137580423 137580459 -8008829 + AT_rich Low_complexity Low_complexity 1 36 0 285 51 0 0 chr10 137580771 137580810 -8008478 + (A)n Simple_repeat Simple_repeat 1 39 0 2480 98 0 0 chr10 137581058 137581364 -8007924 - AluSx SINE Alu -6 306 1 2391 76 0 16 chr10 137583042 137583359 -8005929 + AluSq SINE Alu 1 312 -1 1732 159 48 7 chr10 137583627 137583898 -8005390 + AluJo SINE Alu 1 282 -30 282 338 136 41 chr10 137584304 137584588 -8004700 + L2 LINE L2 2430 2686 -586 1634 177 27 20 chr10 137584588 137584887 -8004401 + AluJb SINE Alu 1 301 -11 282 338 136 41 chr10 137584887 137585255 -8004033 + L2 LINE L2 2686 3156 -116 230 167 0 19 chr10 137585372 137585426 -8003862 + Alu SINE Alu 1 53 -249 234 235 262 0 chr10 137585731 137585918 -8003370 + L1ME4a LINE L1 5859 6094 -27 1048 195 19 5 chr10 137585925 137586130 -8003158 - AluJo SINE Alu -22 290 83 1932 153 56 22 chr10 137586234 137586318 -8002970 + L1MB3 LINE L1 5748 5828 -355 2030 134 0 10 chr10 137586318 137586625 -8002663 + AluSx SINE Alu 1 304 -8 1932 153 56 22 chr10 137586625 137586953 -8002335 + L1MB3 LINE L1 5828 6174 -9 1066 234 135 42 chr10 137587022 137587569 -8001719 + L1MC4 LINE L1 7442 8039 -3 2097 125 0 10 chr10 137587576 137587889 -8001399 + AluSx SINE Alu 1 310 -2 1116 166 0 0 chr10 137588949 137589124 -8000164 + AluSg/x SINE Alu 136 310 0 2379 61 14 0 chr10 137589206 137589500 -7999788 - AluY SINE Alu -13 298 1 2214 130 0 0 chr10 137589600 137589901 -7999387 + AluSx SINE Alu 1 301 -11 1744 154 0 60 chr10 137590062 137590394 -7998894 + AluJb SINE Alu 1 312 0 2057 109 13 33 chr10 137591122 137591424 -7997864 + AluSg SINE Alu 1 296 -14 2245 105 3 3 chr10 137591438 137591733 -7997555 + AluSq SINE Alu 1 295 -18 1537 225 117 28 chr10 137591761 137592224 -7997064 - MLT1D LTR MaLR 0 505 2 2346 103 3 0 chr10 137592361 137592672 -7996616 - AluSq SINE Alu 0 313 2 1328 207 32 18 chr10 137593370 137593650 -7995638 - AluJo SINE Alu -26 286 3 1753 159 3 10 chr10 137593923 137594213 -7995075 + AluJb SINE Alu 1 288 -24 25 51 0 0 chr10 137594214 137594253 -7995035 + AT_rich Low_complexity Low_complexity 1 39 0 1485 163 107 4 chr10 137594553 137594823 -7994465 + AluJo SINE Alu 1 298 -14 262 88 0 0 chr10 137594823 137594857 -7994431 + (TG)n Simple_repeat Simple_repeat 1 34 0 384 200 0 0 chr10 137594858 137594943 -7994345 + (TA)n Simple_repeat Simple_repeat 2 86 0 1152 254 198 46 chr10 137595475 137595899 -7993389 - L2 LINE L2 0 3313 2955 2356 132 47 35 chr10 137595899 137596322 -7992966 - Tigger2a DNA MER2_type -3 431 4 1152 254 198 46 chr10 137596322 137596805 -7992483 - L2 LINE L2 -358 2955 2265 2326 103 3 3 chr10 137597901 137598211 -7991077 - AluSp SINE Alu -3 310 1 1740 152 38 7 chr10 137598258 137598547 -7990741 + AluJb SINE Alu 1 298 -14 225 0 0 0 chr10 137598912 137598937 -7990351 + (A)n Simple_repeat Simple_repeat 1 25 0 1347 172 14 18 chr10 137598987 137599266 -7990022 + L1MB5 LINE L1 5886 6163 -11 1527 187 3 31 chr10 137599553 137599842 -7989446 + AluJo SINE Alu 1 281 -31 23 0 0 0 chr10 137599866 137599889 -7989399 + AT_rich Low_complexity Low_complexity 1 23 0 213 194 0 0 chr10 137600787 137600823 -7988465 + (CA)n Simple_repeat Simple_repeat 1 36 0 569 186 10 0 chr10 137600839 137600936 -7988352 - FAM SINE Alu -28 157 60 32 26 0 0 chr10 137602641 137602680 -7986608 + AT_rich Low_complexity Low_complexity 1 39 0 2067 115 4 0 chr10 137602697 137602975 -7986313 + AluSg1 SINE Alu 1 279 -30 24 0 0 0 chr10 137603127 137603151 -7986137 + AT_rich Low_complexity Low_complexity 1 24 0 2074 120 0 32 chr10 137603344 137603653 -7985635 - AluSg SINE Alu -11 299 1 22 56 0 0 chr10 137604386 137604422 -7984866 + AT_rich Low_complexity Low_complexity 1 36 0 842 156 7 0 chr10 137605019 137605154 -7984134 + FLAM_C SINE Alu 7 142 -1 1934 147 10 0 chr10 137605159 137605452 -7983836 - AluSx SINE Alu -16 296 1 966 195 12 6 chr10 137605471 137605640 -7983648 + FRAM SINE Alu 1 165 -11 1834 126 58 4 chr10 137605737 137606014 -7983274 + AluJo SINE Alu 15 306 -6 2297 97 3 0 chr10 137606865 137607163 -7982125 + AluSq SINE Alu 5 303 -10 888 144 0 0 chr10 137607256 137607395 -7981893 + AluSg/x SINE Alu 165 303 -9 24 85 0 0 chr10 137607419 137607478 -7981810 + AT_rich Low_complexity Low_complexity 1 59 0 210 245 75 0 chr10 137608292 137608345 -7980943 + L2 LINE L2 2992 3048 -224 1250 262 78 13 chr10 137609363 137609749 -7979539 + L2 LINE L2 1996 2406 -908 271 273 0 0 chr10 137609716 137609771 -7979517 + MIR3 SINE MIR 103 157 -51 * 229 219 0 0 chr10 137610133 137610174 -7979114 - tRNA-Ile-ATT tRNA tRNA -26 51 11 2371 90 6 6 chr10 137610910 137611221 -7978067 + AluSq SINE Alu 1 311 -2 827 224 82 8 chr10 137611223 137611478 -7977810 + L1MC1 LINE L1 5129 5402 -744 1083 57 0 0 chr10 137611494 137611618 -7977670 + AluSq/x SINE Alu 11 134 -179 920 130 19 0 chr10 137611618 137611772 -7977516 + L1MC1 LINE L1 5398 5554 -790 2161 119 0 3 chr10 137611772 137612065 -7977223 + AluSx SINE Alu 17 308 -4 3073 140 63 3 chr10 137612090 137612676 -7976612 + L1MC1 LINE L1 5709 6329 -4 2171 115 0 0 chr10 137612676 137612964 -7976324 + AluSx SINE Alu 1 288 -24 1286 155 134 17 chr10 137613020 137613259 -7976029 + AluJo SINE Alu 23 289 -23 1486 196 35 7 chr10 137613308 137613594 -7975694 - AluJb SINE Alu -18 294 1 2144 132 10 0 chr10 137613781 137614084 -7975204 + AluSx SINE Alu 1 306 -6 2257 107 3 0 chr10 137614382 137614681 -7974607 - AluSg SINE Alu -10 300 1 2182 91 14 14 chr10 137614709 137615006 -7974282 + AluSg SINE Alu 1 297 -13 186 233 0 0 chr10 137615019 137615062 -7974226 - MIR SINE MIR -149 113 71 297 275 65 29 chr10 137615177 137615315 -7973973 + L2 LINE L2 2522 2664 -650 806 233 184 23 chr10 137615373 137615682 -7973606 + L2 LINE L2 2891 3249 -64 258 318 26 72 chr10 137616058 137616253 -7973035 + L2 LINE L2 2869 3054 -218 2155 128 7 0 chr10 137616286 137616592 -7972696 - AluSx SINE Alu -4 308 1 2422 50 7 3 chr10 137617092 137617392 -7971896 + AluY SINE Alu 1 301 -10 4202 131 108 10 chr10 137617395 137618518 -7970770 + Tigger3(Golem) DNA MER2_type 1 3029 0 4195 158 68 20 chr10 137618540 137619137 -7970151 + L1MB7 LINE L1 4902 5469 -715 2288 90 0 10 chr10 137619137 137619436 -7969852 + AluSx SINE Alu 1 296 -16 4195 158 68 20 chr10 137619436 137620041 -7969247 + L1MB7 LINE L1 5469 6179 -5 21 36 0 0 chr10 137620099 137620127 -7969161 + AT_rich Low_complexity Low_complexity 1 28 0 757 165 0 23 chr10 137620140 137620273 -7969015 + FLAM_C SINE Alu 1 130 -3 1424 183 83 14 chr10 137620439 137620779 -7968509 + THE1C LTR MaLR 3 318 -110 1881 114 8 8 chr10 137620779 137621034 -7968254 - AluSg SINE Alu -54 256 2 2172 111 30 0 chr10 137621043 137621340 -7967948 - AluSg SINE Alu -4 306 1 1424 183 83 14 chr10 137621340 137621378 -7967910 + THE1C LTR MaLR 325 428 0 573 163 0 0 chr10 137621378 137621470 -7967818 - FLAM_A SINE Alu -49 93 2 1027 134 17 73 chr10 137621534 137621556 -7967732 + AluJb SINE Alu 124 146 -166 2168 104 10 10 chr10 137621556 137621854 -7967434 + AluSg SINE Alu 1 298 -12 1027 134 17 73 chr10 137621854 137622010 -7967278 + AluJb SINE Alu 146 292 -20 323 221 57 108 chr10 137622010 137622106 -7967182 - L1MC4 LINE L1 -1339 6983 6884 1260 193 102 23 chr10 137622106 137622371 -7966917 + AluJo SINE Alu 5 290 -22 323 221 57 108 chr10 137622371 137622432 -7966856 - L1MC4 LINE L1 -1438 6884 1915 29 0 0 0 chr10 137623199 137623228 -7966060 + AT_rich Low_complexity Low_complexity 1 29 0 276 302 165 24 chr10 137623645 137623905 -7965383 - L2 LINE L2 -217 3055 2765 2238 79 3 30 chr10 137624122 137624425 -7964863 + AluSx SINE Alu 1 295 -17 2438 62 0 43 chr10 137624436 137624760 -7964528 + AluY SINE Alu 1 310 -1 2219 94 3 7 chr10 137624786 137625083 -7964205 - AluSx SINE Alu -16 296 1 2249 91 7 0 chr10 137625858 137626154 -7963134 + AluSp SINE Alu 1 298 -15 26 88 0 0 chr10 137626918 137626986 -7962302 + GC_rich Low_complexity Low_complexity 1 68 0 25 51 0 0 chr10 137627029 137627068 -7962220 + GC_rich Low_complexity Low_complexity 1 39 0 2177 91 7 21 chr10 137628824 137629110 -7960178 + AluSq SINE Alu 25 306 -7 498 256 36 100 chr10 137629495 137629575 -7959713 - L1ME LINE L1 -4108 2153 2069 2372 101 0 7 chr10 137629575 137629881 -7959407 - AluSq SINE Alu -9 304 1 498 256 36 100 chr10 137629881 137630116 -7959172 - L1ME LINE L1 -4192 2069 6 180 0 0 0 chr10 137630378 137630398 -7958890 + (TTTC)n Simple_repeat Simple_repeat 1 20 0 1926 161 0 37 chr10 137630403 137630587 -7958701 - AluJb SINE Alu 0 312 123 242 54 0 27 chr10 137630587 137630624 -7958664 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 1678 167 45 0 chr10 137630625 137630889 -7958399 - AluJo SINE Alu -30 282 7 1926 161 0 37 chr10 137630889 137631026 -7958262 - AluJb SINE Alu -188 124 1 823 127 0 0 chr10 137631044 137631162 -7958126 - AluJb SINE Alu -194 118 1 742 220 0 0 chr10 137631258 137631390 -7957898 + FLAM_A SINE Alu 2 133 0 348 193 25 178 chr10 137631825 137631990 -7957298 - MER5B DNA MER1_type 0 178 48 2190 112 7 0 chr10 137631990 137632285 -7957003 - AluSx SINE Alu -15 297 1 348 193 25 178 chr10 137632285 137632321 -7956967 - MER5B DNA MER1_type -130 48 8 199 291 89 0 chr10 137632354 137632433 -7956855 - MIR3 SINE MIR -14 194 109 2114 147 13 0 chr10 137633288 137633594 -7955694 - AluSx SINE Alu -2 310 1 191 355 41 41 chr10 137633767 137633888 -7955400 + MIR3 SINE MIR 34 154 -54 189 286 0 0 chr10 137633894 137633943 -7955345 + MER5B DNA MER1_type 1 49 -129 201 362 65 14 chr10 137634285 137634423 -7954865 - MIR SINE MIR -105 157 13 587 217 96 6 chr10 137634896 137635053 -7954235 + MER5B DNA MER1_type 8 178 0 1772 161 0 0 chr10 137635191 137635451 -7953837 + AluSx SINE Alu 49 308 -4 627 130 0 0 chr10 137636023 137636146 -7953142 + (ATG)n Simple_repeat Simple_repeat 3 125 0 2307 91 3 0 chr10 137636701 137636997 -7952291 + AluSx SINE Alu 1 297 -15 260 146 36 0 chr10 137637057 137637112 -7952176 + CT-rich Low_complexity Low_complexity 1 57 0 2214 147 0 0 chr10 137637378 137637690 -7951598 - AluSx SINE Alu 0 312 1 184 238 250 0 chr10 137637898 137637978 -7951310 + MIR3 SINE MIR 88 187 -21 557 279 38 0 chr10 137638260 137638443 -7950845 - LTR16B LTR ERVL -1 463 274 1418 161 0 17 chr10 137638443 137638679 -7950609 + AluSx SINE Alu 64 295 -17 2087 130 3 3 chr10 137638681 137639109 -7950179 + AluSx SINE Alu 1 428 0 418 295 68 11 chr10 137639111 137639301 -7949987 - LTR16B LTR ERVL -151 313 113 1384 211 81 42 chr10 137639397 137639534 -7949754 + L1ME2 LINE L1 5639 5769 -395 1965 88 0 8 chr10 137639534 137639785 -7949503 + AluSx SINE Alu 1 249 -63 1384 211 81 42 chr10 137639785 137639820 -7949468 + L1ME2 LINE L1 5769 5801 -363 1755 161 43 0 chr10 137639820 137640100 -7949188 + AluJo SINE Alu 1 292 -20 1384 211 81 42 chr10 137640100 137640432 -7948856 + L1ME2 LINE L1 5801 6164 0 220 242 83 0 chr10 137640449 137640539 -7948749 - MIR SINE MIR -85 123 24 3507 154 29 29 chr10 137640723 137641183 -7948105 - L1MC1 LINE L1 -337 5996 5537 2247 102 0 26 chr10 137641183 137641488 -7947800 - AluY SINE Alu -14 297 1 3507 154 29 29 chr10 137641488 137641585 -7947703 - L1MC1 LINE L1 -796 5537 5441 2063 140 0 7 chr10 137641585 137641892 -7947396 - AluJb SINE Alu -7 305 1 3507 154 29 29 chr10 137641892 137642028 -7947260 - L1MC1 LINE L1 -892 5441 5297 491 181 113 69 chr10 137642036 137642190 -7947098 - L1MC1 LINE L1 -1794 4352 4185 2252 110 0 10 chr10 137642190 137642491 -7946797 - AluSg1 SINE Alu -9 300 3 491 181 113 69 chr10 137642491 137642540 -7946748 - L1MC1 LINE L1 -1961 4185 4140 2060 281 92 38 chr10 137642637 137642650 -7946638 - HAL1 LINE L1 -1447 1060 1049 2303 107 7 7 chr10 137642650 137642959 -7946329 - AluSc SINE Alu 0 309 1 2060 281 92 38 chr10 137642959 137643052 -7946236 - HAL1 LINE L1 -1458 1049 962 2183 109 0 28 chr10 137643052 137643373 -7945915 - AluSx SINE Alu 0 312 1 2060 281 92 38 chr10 137643373 137644270 -7945018 - HAL1 LINE L1 -1545 962 2 2100 59 17 38 chr10 137644310 137644639 -7944649 + AluY SINE Alu 1 323 0 414 136 0 0 chr10 137644680 137644739 -7944549 - AluSp/q SINE Alu -19 294 236 * 591 91 0 0 chr10 137644735 137644823 -7944465 + Alu SINE Alu 223 310 0 577 174 0 0 chr10 137644871 137644963 -7944325 - AluJb SINE Alu -13 299 208 2394 89 3 0 chr10 137645063 137645354 -7943934 + AluSq SINE Alu 1 292 -21 1883 180 0 0 chr10 137645359 137645642 -7943646 + AluJb SINE Alu 11 293 -19 2065 128 23 10 chr10 137645668 137645972 -7943316 + AluSx SINE Alu 1 308 -4 2218 122 0 10 chr10 137645974 137646277 -7943011 + AluSx SINE Alu 1 300 -12 2326 107 0 16 chr10 137646738 137647055 -7942233 + AluSx SINE Alu 1 312 0 2122 120 27 0 chr10 137648168 137648468 -7940820 + AluSg SINE Alu 1 308 -2 285 269 260 31 chr10 137648523 137648750 -7940538 + L2 LINE L2 2994 3272 0 1880 179 0 40 chr10 137648808 137649133 -7940155 + AluJb SINE Alu 1 312 0 1711 52 13 4 chr10 137649281 137649514 -7939774 + LTR10E LTR ERV1 1 235 -398 740 133 0 0 chr10 137649514 137649627 -7939661 + LTR10E LTR ERV1 173 285 -348 241 289 18 6 chr10 137649744 137649868 -7939420 + L3 LINE CR1 1279 1469 -108 3180 32 11 0 chr10 137649877 137650250 -7939038 + L1PA5 LINE L1 5770 6146 -8 2420 124 6 3 chr10 137650264 137650626 -7938662 + LTR10E LTR ERV1 271 633 0 495 260 29 98 chr10 137650783 137650987 -7938301 - MIR SINE MIR -50 212 23 363 212 40 30 chr10 137651325 137651424 -7937864 + L1ME4a LINE L1 5979 6078 -43 1800 166 42 0 chr10 137651425 137651714 -7937574 - AluJo SINE Alu -8 304 4 1238 216 7 48 chr10 137651731 137652041 -7937247 + AluJo SINE Alu 1 297 -15 326 159 14 0 chr10 137652041 137652110 -7937178 + GA-rich Low_complexity Low_complexity 1 70 0 2223 100 4 0 chr10 137652413 137652738 -7936550 - AluSx SINE Alu 0 326 1 2195 130 0 0 chr10 137653098 137653399 -7935889 + AluSx SINE Alu 1 301 -11 1790 148 0 40 chr10 137653766 137654070 -7935218 + AluJb SINE Alu 1 292 -20 2181 99 3 13 chr10 137655519 137655822 -7933466 - AluSc SINE Alu -9 300 1 1882 155 0 41 chr10 137656073 137656389 -7932899 + AluJb SINE Alu 1 303 -9 331 167 48 24 chr10 137656409 137656493 -7932795 - MER115 DNA AcHobo 0 693 608 247 103 13 64 chr10 137656511 137656589 -7932699 + (TAA)n Simple_repeat Simple_repeat 1 74 0 1057 184 35 116 chr10 137656608 137656865 -7932423 - Zaphod DNA AcHobo -306 3725 3524 1540 177 54 41 chr10 137656865 137657018 -7932270 - AluJo SINE Alu -14 298 138 2557 61 0 0 chr10 137657018 137657313 -7931975 - AluY SINE Alu -16 295 1 1540 177 54 41 chr10 137657313 137657453 -7931835 - AluJo SINE Alu -174 138 1 1057 184 35 116 chr10 137657453 137657678 -7931610 - Zaphod DNA AcHobo -507 3524 3282 * 1787 290 55 22 chr10 137657677 137657750 -7931538 - Zaphod DNA AcHobo -3368 663 594 2272 104 24 0 chr10 137657750 137658047 -7931241 + AluSx SINE Alu 7 310 -2 1787 290 55 22 chr10 137658047 137658607 -7930681 - Zaphod DNA AcHobo -3437 594 9 193 182 0 0 chr10 137658677 137658710 -7930578 - L2 LINE L2 -27 3245 3213 2160 108 39 0 chr10 137658774 137659060 -7930228 - AluSx SINE Alu -15 297 1 2037 126 3 50 chr10 137659060 137659378 -7929910 - AluSx SINE Alu -9 303 1 2246 119 13 7 chr10 137659434 137659744 -7929544 + AluSx SINE Alu 1 312 0 185 223 32 85 chr10 137660157 137660251 -7929037 + MIR SINE MIR 56 144 -118 213 65 0 0 chr10 137660395 137660426 -7928862 + (TG)n Simple_repeat Simple_repeat 2 32 0 1362 234 24 57 chr10 137660457 137660546 -7928742 - MLT1C LTR MaLR 0 467 377 1927 165 3 3 chr10 137660546 137660866 -7928422 - AluJb SINE Alu 0 312 1 1362 234 24 57 chr10 137660866 137661199 -7928089 - MLT1C LTR MaLR -90 377 59 345 181 14 0 chr10 137661258 137661330 -7927958 - HsTC2 DNA Tc2 -1824 74 2 195 100 0 0 chr10 137661671 137661701 -7927587 + (CA)n Simple_repeat Simple_repeat 1 30 0 1571 96 46 69 chr10 137661705 137661965 -7927323 + AluSx SINE Alu 59 312 0 2417 61 0 14 chr10 137661966 137662262 -7927026 + AluY SINE Alu 1 292 -19 1803 171 20 0 chr10 137662395 137662687 -7926601 - AluJb SINE Alu -14 298 1 306 315 30 70 chr10 137662798 137662998 -7926290 - MIR3 SINE MIR -13 195 4 517 192 56 7 chr10 137663019 137663154 -7926134 - MIR SINE MIR -62 146 52 2530 68 0 0 chr10 137663617 137663913 -7925375 - AluY SINE Alu -15 296 1 1960 121 55 24 chr10 137663913 137664202 -7925086 - AluSx SINE Alu -13 299 1 512 259 27 14 chr10 137665208 137665355 -7923933 + L1MC5 LINE L1 7710 7858 -103 2098 97 0 62 chr10 137665388 137665728 -7923560 + AluSx SINE Alu 1 312 0 241 214 36 0 chr10 137665820 137665876 -7923412 - L1M4 LINE L1 -597 5587 5530 336 310 54 8 chr10 137665923 137666052 -7923236 - L1M4 LINE L1 -712 5450 5316 2361 81 0 36 chr10 137666159 137666468 -7922820 - AluSx SINE Alu -14 298 1 664 161 42 8 chr10 137666498 137666616 -7922672 - MER63 DNA MER1_type -83 753 6 784 258 129 13 chr10 137666905 137667130 -7922158 - MER45C DNA AcHobo 0 953 703 740 283 30 4 chr10 137667213 137667446 -7921842 - MER45C DNA AcHobo -688 265 27 2007 143 3 13 chr10 137667603 137667917 -7921371 + AluJb SINE Alu 1 311 -1 2414 109 0 0 chr10 137667939 137668251 -7921037 + AluSx SINE Alu 1 312 0 1510 104 111 101 chr10 137668341 137668648 -7920640 + AluJb SINE Alu 1 310 -2 687 276 53 96 chr10 137668665 137668901 -7920387 - MLT1J LTR MaLR -61 450 205 2089 68 53 0 chr10 137668901 137669166 -7920122 - AluY SINE Alu -10 301 23 2120 106 0 4 chr10 137669166 137669438 -7919850 - AluSq SINE Alu -37 276 4 687 276 53 96 chr10 137669438 137669668 -7919620 - MLT1J LTR MaLR -304 207 3 719 231 162 22 chr10 137671119 137671533 -7917755 + LTR33 LTR ERVL 4 519 -2 2305 120 0 0 chr10 137671691 137672000 -7917288 - AluSx SINE Alu -3 309 1 2110 124 10 0 chr10 137672442 137672732 -7916556 + AluSx SINE Alu 1 293 -19 2539 57 0 0 chr10 137673238 137673535 -7915753 + AluY SINE Alu 1 297 -14 612 115 23 0 chr10 137673686 137673773 -7915515 - AluJb SINE Alu -16 296 208 336 204 0 0 chr10 137673773 137673827 -7915461 - AluJ/monomer SINE Alu -248 54 1 1593 135 83 24 chr10 137673828 137674117 -7915171 - AluJo SINE Alu -6 306 1 296 253 51 0 chr10 137674221 137674300 -7914988 - L2 LINE L2 -4 3309 3227 2474 86 0 0 chr10 137674936 137675238 -7914050 + AluSg SINE Alu 1 302 -8 536 155 23 8 chr10 137675241 137675370 -7913918 + (TG)n Simple_repeat Simple_repeat 2 132 0 243 0 0 0 chr10 137675413 137675440 -7913848 + (TG)n Simple_repeat Simple_repeat 2 28 0 2124 124 0 0 chr10 137675445 137675736 -7913552 - AluSx SINE Alu -21 291 1 366 167 114 0 chr10 137676174 137676288 -7913000 - Charlie4 DNA MER1_type -68 1893 1767 2437 97 0 0 chr10 137676294 137676593 -7912695 - AluSx SINE Alu -11 301 3 2133 125 0 10 chr10 137676596 137676893 -7912395 - AluSx SINE Alu -18 294 1 2279 116 0 0 chr10 137676905 137677198 -7912090 - AluSx SINE Alu -19 293 1 773 233 23 0 chr10 137677223 137677399 -7911889 - Charlie4 DNA MER1_type -1743 218 39 192 331 91 25 chr10 137677431 137677552 -7911736 + L2 LINE L2 3143 3271 -1 204 184 162 52 chr10 137677566 137677770 -7911518 - MIR3 SINE MIR -6 256 3 1361 56 20 67 chr10 137677842 137678037 -7911251 + AluSp SINE Alu 121 306 -7 1888 134 85 0 chr10 137678048 137678331 -7910957 + AluJb SINE Alu 1 307 -5 219 139 0 0 chr10 137678701 137678737 -7910551 + (TTCC)n Simple_repeat Simple_repeat 1 36 0 2242 123 0 3 chr10 137678737 137679047 -7910241 - AluSx SINE Alu -3 309 1 341 330 124 19 chr10 137679790 137680160 -7909128 + L2 LINE L2 1698 2106 -1208 1776 167 13 16 chr10 137680378 137680683 -7908605 - AluJo SINE Alu -8 304 1 928 176 6 12 chr10 137681089 137681254 -7908034 - AluJb SINE Alu -16 296 133 1825 183 13 3 chr10 137681488 137681794 -7907494 + AluJo SINE Alu 2 310 -2 181 238 0 0 chr10 137681845 137681887 -7907401 + MIR SINE MIR 98 139 -69 210 218 0 55 chr10 137681914 137681969 -7907319 - MER5B DNA MER1_type 0 178 127 2501 76 0 13 chr10 137681979 137682294 -7906994 + AluY SINE Alu 1 311 0 2082 120 0 11 chr10 137682387 137682702 -7906586 - AluSx SINE Alu 0 312 1 2228 119 7 3 chr10 137682716 137683026 -7906262 - AluSq SINE Alu -2 311 1 915 246 74 31 chr10 137685990 137686343 -7902945 - MLT1A2 LTR MaLR -3 371 4 2425 77 0 13 chr10 137686637 137686937 -7902351 + AluSc SINE Alu 1 296 -13 1144 221 20 4 chr10 137686942 137687195 -7902093 + AluJb SINE Alu 1 257 -55 28 0 0 0 chr10 137689594 137689622 -7899666 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr10 137689995 137690016 -7899272 + AT_rich Low_complexity Low_complexity 1 21 0 330 132 0 0 chr10 137690663 137690716 -7898572 + (TG)n Simple_repeat Simple_repeat 2 54 0 226 227 93 47 chr10 137692800 137692950 -7896338 + L2 LINE L2 2719 2875 -439 600 207 41 55 chr10 137696095 137696240 -7893048 + AluSq/x SINE Alu 7 149 -163 265 182 296 0 chr10 137696736 137696824 -7892464 + L1M4 LINE L1 3734 3847 -2299 * 1496 204 25 48 chr10 137696823 137697265 -7892023 + L1M4 LINE L1 4513 4944 -1202 1562 167 4 8 chr10 137697833 137698090 -7891198 + AluJb SINE Alu 1 256 -56 220 289 0 67 chr10 137698681 137698771 -7890517 + MIR SINE MIR 57 140 -68 1497 206 63 18 chr10 137699166 137699563 -7889725 + L1MC3 LINE L1 7352 7766 -19 2135 125 0 7 chr10 137701353 137701657 -7887631 + AluSx SINE Alu 1 302 -10 246 182 0 0 chr10 137701997 137702041 -7887247 + Alu SINE Alu 36 79 -223 492 86 37 221 chr10 137702043 137702086 -7887202 + L1MC3 LINE L1 7621 7670 -115 2023 113 7 10 chr10 137702086 137702388 -7886900 + AluSc SINE Alu 1 301 -8 492 86 37 221 chr10 137702388 137702426 -7886862 + L1MC3 LINE L1 7670 7662 -123 683 235 13 0 chr10 137702426 137702605 -7886683 + FRAM SINE Alu 1 45 0 492 86 37 221 chr10 137702605 137702684 -7886604 + L1MC3 LINE L1 7661 7753 -32 2062 127 0 10 chr10 137702684 137702984 -7886304 - AluSx SINE Alu -15 297 1 571 138 2 11 chr10 137702984 137703106 -7886182 - L1MB3 LINE L1 -352 5831 5716 1033 195 19 5 chr10 137703172 137703377 -7885911 + AluJo SINE Alu 83 290 -22 296 235 262 0 chr10 137703384 137703571 -7885717 - L1ME4a LINE L1 -27 6094 5859 252 167 0 19 chr10 137703876 137703930 -7885358 - Alu SINE Alu -248 53 1 193 337 10 20 chr10 137704377 137704415 -7884873 - L2 LINE L2 -527 2787 2750 1585 178 30 20 chr10 137704415 137704713 -7884575 - AluJb SINE Alu -11 301 1 193 337 10 20 chr10 137704713 137704775 -7884513 - L2 LINE L2 -564 2750 2688 851 258 52 8 chr10 137706681 137706933 -7882355 - L2 LINE L2 -599 2715 2453 935 214 144 83 chr10 137706935 137707332 -7881956 - MLT1F1 LTR MaLR 0 567 147 718 172 0 0 chr10 137707547 137707663 -7881625 + AluJb SINE Alu 176 291 -21 209 213 0 0 chr10 137708348 137708395 -7880893 + T-rich Low_complexity Low_complexity 1 47 0 924 233 146 36 chr10 137709164 137709520 -7879768 - MLT1I LTR MaLR 0 409 15 2282 119 37 8 chr10 137710694 137711048 -7878240 + THE1B LTR MaLR 1 364 0 749 223 120 43 chr10 137712573 137712873 -7876415 - L1ME3A LINE L1 -49 6121 5799 652 306 60 32 chr10 137716637 137716951 -7872337 - MLT1I LTR MaLR -16 393 71 291 248 101 54 chr10 137717378 137717527 -7871761 + MLT1J2 LTR MaLR 113 268 -182 332 320 39 7 chr10 137717528 137717681 -7871607 + MLT1J1 LTR MaLR 289 446 0 1263 85 0 0 chr10 137718914 137719067 -7870221 + AluSx SINE Alu 1 153 -159 1056 161 43 0 chr10 137719068 137719279 -7870009 + AluSx SINE Alu 52 271 -41 1321 144 162 48 chr10 137720162 137720433 -7868855 + AluJo SINE Alu 1 302 0 2084 147 0 0 chr10 137720689 137720995 -7868293 + AluSx SINE Alu 1 306 -6 180 111 0 0 chr10 137721621 137721648 -7867640 + (CAAAAA)n Simple_repeat Simple_repeat 4 30 0 271 56 0 0 chr10 137723077 137723113 -7866175 + L2 LINE L2 3274 3309 -4 2098 107 7 10 chr10 137724048 137724339 -7864949 - AluSg SINE Alu -20 290 1 861 285 115 23 chr10 137724379 137724443 -7864845 - MLT1K LTR MaLR -26 562 505 234 0 0 0 chr10 137724443 137724469 -7864819 + (CAAAA)n Simple_repeat Simple_repeat 1 26 0 861 285 115 23 chr10 137724469 137724916 -7864372 - MLT1K LTR MaLR -83 505 4 255 170 35 35 chr10 137724946 137725029 -7864259 + AluS SINE Alu 1 65 -243 1166 288 63 49 chr10 137726485 137727055 -7862233 - MLT1K LTR MaLR 0 588 11 440 269 17 0 chr10 137727758 137727877 -7861411 + L1ME LINE L1 5604 5724 -397 284 157 0 0 chr10 137728416 137728512 -7860776 + AluJ/FRAM SINE Alu 230 325 0 2556 66 3 0 chr10 137728638 137728942 -7860346 - AluSq SINE Alu -8 305 1 497 225 86 26 chr10 137731009 137731137 -7858151 - L1ME LINE L1 -628 5538 5419 2239 109 13 10 chr10 137731137 137731440 -7857848 - AluSx SINE Alu -8 304 1 497 225 86 26 chr10 137731440 137731619 -7857669 - L1ME LINE L1 -747 5419 5211 1207 178 8 45 chr10 137731644 137731886 -7857402 - AluJo SINE Alu -9 303 71 451 251 114 47 chr10 137731933 137732190 -7857098 + L1MC4a LINE L1 5647 5792 -378 2056 163 0 3 chr10 137732264 137732577 -7856711 - AluJb SINE Alu 0 312 1 356 238 37 65 chr10 137732977 137733101 -7856187 + MIR SINE MIR 32 151 -62 360 208 44 71 chr10 137734127 137734248 -7855040 - MIR3 SINE MIR -48 160 42 392 258 53 30 chr10 137734374 137734506 -7854782 + MLT1L LTR MaLR 258 392 -223 1090 225 114 59 chr10 137734528 137735021 -7854267 - LTR33A LTR ERVL -3 520 1 907 215 0 0 chr10 137735166 137735324 -7853964 + FRAM SINE Alu 1 158 -18 1504 82 0 44 chr10 137735935 137736165 -7853123 + AluSg/x SINE Alu 84 304 0 232 108 27 0 chr10 137736230 137736267 -7853021 - MLT1K LTR MaLR -19 569 532 1778 154 91 0 chr10 137736898 137737184 -7852104 + AluJo SINE Alu 1 312 0 1775 186 6 22 chr10 137737189 137737328 -7851960 + AluJo SINE Alu 1 141 -171 2221 87 38 0 chr10 137737328 137737615 -7851673 + AluSp SINE Alu 1 298 -15 1775 186 6 22 chr10 137737615 137737792 -7851496 + AluJo SINE Alu 141 312 0 622 280 118 5 chr10 137738496 137738707 -7850581 - MIR SINE MIR 0 262 28 516 292 64 6 chr10 137738962 137739380 -7849908 + LTR33 LTR ERVL 15 513 -8 487 258 141 0 chr10 137739406 137739534 -7849754 + MIR SINE MIR 105 250 -12 1096 109 13 0 chr10 137739552 137739708 -7849580 - L1PA10 LINE L1 -6 6162 6005 185 300 20 0 chr10 137739760 137739810 -7849478 - MER5A DNA MER1_type 0 189 139 221 344 148 0 chr10 137740225 137740414 -7848874 + L2 LINE L2 2839 3055 -217 2266 121 16 0 chr10 137740484 137740790 -7848498 - AluSx SINE Alu 0 312 2 746 276 103 43 chr10 137740845 137741242 -7848046 + L1ME4a LINE L1 5513 5956 -165 2135 128 3 0 chr10 137741242 137741531 -7847757 - AluSq SINE Alu -21 292 3 746 276 103 43 chr10 137741531 137741708 -7847580 + L1ME4a LINE L1 5956 6121 0 333 286 61 99 chr10 137742914 137743127 -7846161 - L2 LINE L2 -18 3254 3050 228 35 0 0 chr10 137744594 137744623 -7844665 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 322 170 234 32 chr10 137744687 137744781 -7844507 - MER81 DNA DNA -1 113 1 829 172 21 45 chr10 137745043 137745309 -7843979 - L1MB2 LINE L1 -157 6014 5710 245 345 26 9 chr10 137745310 137745426 -7843862 - MIR SINE MIR -99 163 46 2101 136 152 8 chr10 137745525 137745899 -7843389 - MSTA LTR MaLR 0 428 1 534 260 54 39 chr10 137745899 137746103 -7843185 - MLT1J2 LTR MaLR -3 447 241 1568 214 41 71 chr10 137748362 137748939 -7840349 - MLT1F1 LTR MaLR 0 593 1 2063 121 0 3 chr10 137748978 137749260 -7840028 + AluSx SINE Alu 1 281 -31 183 42 0 0 chr10 137749262 137749286 -7840002 + (T)n Simple_repeat Simple_repeat 1 24 0 843 179 130 6 chr10 137749313 137749509 -7839779 + FRAM SINE Alu 1 209 0 230 291 188 0 chr10 137750140 137750257 -7839031 - MIR SINE MIR -6 256 118 264 290 79 45 chr10 137750539 137750685 -7838603 + MIR3 SINE MIR 3 154 -69 287 314 43 0 chr10 137750711 137750851 -7838437 + MER117 DNA MER1_type 16 161 -36 187 292 56 0 chr10 137750892 137750964 -7838324 + MIR SINE MIR 168 243 -19 2241 123 0 0 chr10 137752038 137752338 -7836950 - AluSx SINE Alu -12 300 1 196 327 36 42 chr10 137752617 137752785 -7836503 + L2 LINE L2 1724 1890 -1424 1381 204 86 6 chr10 137753614 137753938 -7835350 + MER58D DNA MER1_type 37 386 0 210 279 164 33 chr10 137753969 137754091 -7835197 + L2 LINE L2 2720 2857 -457 250 304 125 0 chr10 137754135 137754247 -7835041 + L2 LINE L2 3147 3272 0 278 367 55 0 chr10 137754594 137754722 -7834566 - MIR3 SINE MIR -70 138 4 1918 159 13 3 chr10 137754840 137755142 -7834146 + AluJb SINE Alu 1 305 -7 2228 79 41 3 chr10 137755144 137755520 -7833768 + AluYa5 SINE Alu 10 396 0 1258 217 13 26 chr10 137756432 137756741 -7832547 - MLT1A1 LTR MaLR -7 358 54 2678 49 0 0 chr10 137757956 137758260 -7831028 + AluY SINE Alu 1 304 -7 196 328 0 30 chr10 137758417 137758484 -7830804 - L2 LINE L2 -4 3268 3204 276 189 135 167 chr10 137758540 137758681 -7830607 + MER112 DNA MER1_type 2 135 -125 1962 150 13 19 chr10 137758681 137758988 -7830300 - AluSx SINE Alu -7 305 1 276 189 135 167 chr10 137758988 137759068 -7830220 + MER112 DNA MER1_type 135 216 -44 406 298 0 0 chr10 137759071 137759192 -7830096 - AluY SINE Alu -187 124 4 1472 134 17 112 chr10 137759527 137759884 -7829404 + L1MA10 LINE L1 6012 6334 0 287 280 101 37 chr10 137759880 137759942 -7829346 + L1ME4a LINE L1 5831 5888 -233 * 2350 89 7 0 chr10 137759942 137760235 -7829053 + AluSc SINE Alu 1 295 -14 287 280 101 37 chr10 137760235 137760440 -7828848 + L1ME4a LINE L1 5888 6115 -6 467 267 102 5 chr10 137761448 137761654 -7827634 - L1ME LINE L1 -307 5814 5589 * 37320 78 10 7 chr10 137761645 137767776 -7821512 - L1PA6 LINE L1 0 6154 11 359 190 298 25 chr10 137767898 137768019 -7821269 - L1ME4a LINE L1 -8 6113 5960 435 19 0 0 chr10 137768023 137768075 -7821213 + (CA)n Simple_repeat Simple_repeat 2 53 0 2341 112 3 0 chr10 137768656 137768960 -7820328 + AluSc SINE Alu 1 305 -4 354 307 78 13 chr10 137769999 137770152 -7819136 + MIR SINE MIR 86 248 -14 246 32 0 0 chr10 137770347 137770378 -7818910 + (CAGG)n Simple_repeat Simple_repeat 4 34 0 296 301 12 0 chr10 137770513 137770596 -7818692 + CT-rich Low_complexity Low_complexity 2 85 0 397 343 165 4 chr10 137770625 137770873 -7818415 + L2 LINE L2 2985 3272 0 195 317 117 8 chr10 137771472 137771592 -7817696 - L2 LINE L2 -229 3084 2952 223 208 8 50 chr10 137772512 137772632 -7816656 + (TATATG)n Simple_repeat Simple_repeat 6 120 0 268 412 7 0 chr10 137772652 137772788 -7816500 + (TG)n Simple_repeat Simple_repeat 1 137 0 194 200 0 0 chr10 137772795 137772825 -7816463 - L3b LINE CR1 -275 1308 1279 21 57 0 0 chr10 137773577 137773612 -7815676 + AT_rich Low_complexity Low_complexity 1 35 0 665 252 86 50 chr10 137774119 137774341 -7814947 + MIR SINE MIR 30 259 -3 268 233 25 75 chr10 137774482 137774602 -7814686 + L1ME4a LINE L1 5970 6083 -38 185 240 80 0 chr10 137775739 137775789 -7813499 + L2 LINE L2 3207 3260 -12 293 267 29 29 chr10 137777867 137777972 -7811316 - L3 LINE CR1 -354 1223 1119 358 254 15 52 chr10 137783756 137783890 -7805398 - MIR SINE MIR -62 146 18 342 321 22 7 chr10 137786172 137786309 -7802979 + MIR SINE MIR 14 152 -110 386 297 137 30 chr10 137787413 137787676 -7801612 + LTR16A LTR ERVL 160 450 0 618 214 6 63 chr10 137787677 137787836 -7801452 - MIR SINE MIR -44 218 69 396 279 158 12 chr10 137787898 137788063 -7801225 + MER5A DNA MER1_type 1 189 0 3983 160 20 20 chr10 137788369 137789106 -7800182 - L1MB3 LINE L1 -16 6167 5431 1972 108 36 0 chr10 137789134 137789412 -7799876 - AluSx SINE Alu -24 288 1 396 214 182 19 chr10 137790163 137790322 -7798966 - MER5A DNA MER1_type 0 189 5 235 355 12 41 chr10 137790730 137790902 -7798386 - MIR SINE MIR -49 213 47 296 313 73 0 chr10 137791148 137791244 -7798044 + MIR SINE MIR 40 142 -66 641 324 29 41 chr10 137792716 137792925 -7796363 - L1ME4a LINE L1 -81 6040 5830 2206 109 0 0 chr10 137792925 137793228 -7796060 - AluSx SINE Alu -9 303 1 641 324 29 41 chr10 137793228 137793460 -7795828 - L1ME4a LINE L1 -291 5830 5604 1320 288 63 49 chr10 137794162 137794732 -7794556 + MLT1K LTR MaLR 11 588 0 2101 120 0 13 chr10 137796034 137796350 -7792938 + AluSx SINE Alu 1 312 0 1618 269 98 38 chr10 137796362 137796797 -7792491 + L1MEc LINE L1 809 1217 -4998 1780 148 178 6 chr10 137796797 137797162 -7792126 - MSTA LTR MaLR 0 428 1 1618 269 98 38 chr10 137797162 137798718 -7790570 + L1MEc LINE L1 1217 2892 -3323 23 0 0 0 chr10 137798718 137798741 -7790547 + AT_rich Low_complexity Low_complexity 1 23 0 1782 147 18 3 chr10 137798741 137799027 -7790261 - AluSx SINE Alu -22 290 1 403 75 0 0 chr10 137799027 137799080 -7790208 - AluSq/x SINE Alu -178 135 83 947 272 58 28 chr10 137799526 137799989 -7789299 + L1MEc LINE L1 3437 3913 -2302 * 5427 248 86 44 chr10 137799976 137799997 -7789291 + L1ME3A LINE L1 2955 2974 -3196 1780 168 0 9 chr10 137799997 137800312 -7788976 + AluJo SINE Alu 1 312 0 5427 248 86 44 chr10 137800312 137801169 -7788119 + L1ME3A LINE L1 2974 3794 -2376 2496 57 0 0 chr10 137801169 137801468 -7787820 + AluY SINE Alu 1 299 -12 5427 248 86 44 chr10 137801468 137803372 -7785916 + L1ME3A LINE L1 3794 5874 -296 200 79 53 0 chr10 137803374 137803412 -7785876 + T-rich Low_complexity Low_complexity 3 42 0 693 228 50 56 chr10 137803520 137803647 -7785641 + L1ME3A LINE L1 5829 5955 -215 2157 91 10 0 chr10 137803647 137803945 -7785343 + AluSp SINE Alu 1 301 -12 693 228 50 56 chr10 137803945 137804108 -7785180 + L1ME3A LINE L1 5955 6126 -44 2132 145 38 15 chr10 137804398 137804790 -7784498 - L1MC1 LINE L1 0 6333 5933 2578 125 20 0 chr10 137804917 137805317 -7783971 - L1MC1 LINE L1 -445 5888 5481 323 253 0 61 chr10 137806266 137806365 -7782923 + MIR SINE MIR 50 142 -120 2170 86 3 32 chr10 137806375 137806688 -7782600 + AluSp SINE Alu 1 304 -9 635 153 104 49 chr10 137808017 137808161 -7781127 - MER20 DNA MER1_type -67 152 1 21 0 0 0 chr10 137808436 137808457 -7780831 + AT_rich Low_complexity Low_complexity 1 21 0 1535 153 33 27 chr10 137808843 137809144 -7780144 - AluJo SINE Alu -9 303 1 1094 236 113 37 chr10 137809259 137809691 -7779597 - MLT1C LTR MaLR 0 467 3 7218 58 0 0 chr10 137809936 137810961 -7778327 - L1PA6 LINE L1 0 6154 5128 281 59 0 59 chr10 137812904 137812955 -7776333 + Alu SINE Alu 1 48 -252 26 30 0 0 chr10 137813042 137813075 -7776213 + AT_rich Low_complexity Low_complexity 1 33 0 2068 70 7 18 chr10 137813601 137813887 -7775401 - AluY SINE Alu -28 283 1 1167 167 8 30 chr10 137814050 137814284 -7775004 + L1M3 LINE L1 5300 5528 -652 1986 85 50 3 chr10 137814290 137814572 -7774716 + AluSq SINE Alu 6 300 -13 2052 92 0 11 chr10 137815253 137815536 -7773752 + AluSc SINE Alu 1 280 -29 252 0 0 0 chr10 137815646 137815674 -7773614 + (CA)n Simple_repeat Simple_repeat 2 29 0 278 265 61 20 chr10 137815933 137816031 -7773257 - MIR SINE MIR -60 202 101 884 121 8 0 chr10 137816116 137816248 -7773040 - AluJo SINE Alu -177 135 3 457 178 14 0 chr10 137816249 137816322 -7772966 + MER45A DNA AcHobo 105 178 0 989 53 22 155 chr10 137817314 137817425 -7771863 + L1MB3 LINE L1 5961 6028 -155 1861 122 0 73 chr10 137817425 137817754 -7771534 + AluSx SINE Alu 1 305 -7 989 53 22 155 chr10 137817754 137817868 -7771420 + L1MB3 LINE L1 6028 6156 -27 380 297 23 16 chr10 137818680 137818808 -7770480 - L1MC4 LINE L1 -124 7918 7790 1054 258 85 0 chr10 137818861 137819156 -7770132 + MER5C DNA MER1_type 1 320 -4 304 254 45 9 chr10 137819162 137819272 -7770016 - L1MC4 LINE L1 -297 7745 7632 822 198 36 24 chr10 137819946 137820113 -7769175 + MER45A DNA AcHobo 8 176 -2 362 230 18 44 chr10 137820459 137820572 -7768716 + LTR16C LTR ERVL 382 491 0 258 259 74 28 chr10 137820625 137820733 -7768555 + MIR SINE MIR 144 256 -6 1310 199 158 50 chr10 137820827 137820897 -7768391 - MLT1C LTR MaLR 0 467 406 2132 97 3 3 chr10 137820897 137821197 -7768091 + AluSc SINE Alu 1 300 -9 1310 199 158 50 chr10 137821197 137821543 -7767745 - MLT1C LTR MaLR -61 406 6 345 313 52 9 chr10 137821841 137821956 -7767332 - L2 LINE L2 0 3272 3153 315 344 80 7 chr10 137822148 137822299 -7766989 + MIR3 SINE MIR 29 190 -18 447 204 66 139 chr10 137822319 137822431 -7766857 - MIR SINE MIR -11 251 132 2036 128 0 0 chr10 137822431 137822721 -7766567 - AluSx SINE Alu -22 290 1 2030 132 3 0 chr10 137822731 137823034 -7766254 - AluSx SINE Alu -8 304 1 447 204 66 139 chr10 137823034 137823174 -7766114 - MIR SINE MIR -139 123 2 1883 84 4 0 chr10 137823194 137823444 -7765844 - AluSq SINE Alu -45 268 18 2219 110 0 3 chr10 137823450 137823742 -7765546 - AluSg SINE Alu -18 292 2 588 215 7 30 chr10 137823746 137823881 -7765407 - FLAM_A SINE Alu -1 132 1 396 146 13 78 chr10 137823882 137823970 -7765318 + AluJ/FLAM SINE Alu 1 68 -234 770 173 0 24 chr10 137824110 137824237 -7765051 - FLAM_C SINE Alu -9 124 1 580 301 48 0 chr10 137824622 137824828 -7764460 + LTR33 LTR ERVL 2 217 -304 1355 158 5 5 chr10 137824926 137825179 -7764109 + AluSg/x SINE Alu 73 325 0 866 176 0 14 chr10 137825184 137825326 -7763962 - FAM SINE Alu -45 140 1 361 288 53 23 chr10 137826301 137826433 -7762855 + L1MC/D LINE L1 5460 5595 -2213 2668 145 20 2 chr10 137826440 137826895 -7762393 + L1MB2 LINE L1 5366 5828 -343 1134 41 0 0 chr10 137827000 137827146 -7762142 - L1P LINE L1 -1652 4494 4349 215 61 30 0 chr10 137827627 137827660 -7761628 + (TCCA)n Simple_repeat Simple_repeat 1 34 0 237 244 39 0 chr10 137827682 137827760 -7761528 + (TCCA)n Simple_repeat Simple_repeat 4 84 0 207 281 12 37 chr10 137827765 137827847 -7761441 + CT-rich Low_complexity Low_complexity 4 83 0 198 231 0 0 chr10 137827864 137827929 -7761359 + (TCCA)n Simple_repeat Simple_repeat 4 68 0 201 288 0 0 chr10 137827947 137828006 -7761282 + (TCCA)n Simple_repeat Simple_repeat 2 60 0 426 231 0 126 chr10 137828006 137828108 -7761180 - L2 LINE L2 0 3313 3232 740 186 40 45 chr10 137828108 137828285 -7761003 - MER69A DNA AcHobo 0 177 2 426 231 0 126 chr10 137828285 137828325 -7760963 - L2 LINE L2 -81 3232 3189 2144 96 23 0 chr10 137828387 137828690 -7760598 + THE1C LTR MaLR 1 310 -65 1971 135 25 33 chr10 137828683 137829078 -7760210 - MLT2A2 LTR ERVL -149 304 1 * 2005 127 13 17 chr10 137829882 137830181 -7759107 + AluSx SINE Alu 15 312 0 2097 108 30 17 chr10 137830183 137830502 -7758786 + AluSx SINE Alu 1 312 0 200 33 0 33 chr10 137830525 137830555 -7758733 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1818 158 10 10 chr10 137831458 137831756 -7757532 - AluJb SINE Alu -14 298 1 21 57 0 0 chr10 137832811 137832846 -7756442 + AT_rich Low_complexity Low_complexity 1 35 0 193 227 82 41 chr10 137833409 137833506 -7755782 + L2 LINE L2 2837 2937 -335 * 197 309 86 37 chr10 137833503 137833584 -7755704 + L2 LINE L2 3188 3272 0 396 273 62 43 chr10 137833618 137833779 -7755509 + MIR SINE MIR 20 183 -79 2462 93 3 0 chr10 137833943 137834245 -7755043 - AluSp SINE Alu -8 305 3 194 241 194 37 chr10 137834479 137834587 -7754701 - L2 LINE L2 -9 3263 3139 599 196 112 24 chr10 137834620 137834919 -7754369 - MSTD LTR MaLR -3 393 6 2368 91 0 0 chr10 137835251 137835547 -7753741 + AluY SINE Alu 1 296 -15 226 225 0 0 chr10 137835561 137835601 -7753687 + (TCCA)n Simple_repeat Simple_repeat 4 43 0 197 370 100 0 chr10 137835604 137835704 -7753584 - L2 LINE L2 -5 3267 3158 294 268 140 85 chr10 137836024 137836213 -7753075 - MIR SINE MIR 0 262 56 1829 135 101 26 chr10 137836213 137836560 -7752728 + THE1C LTR MaLR 3 375 0 294 268 140 85 chr10 137836560 137836605 -7752683 - MIR SINE MIR -206 56 15 207 0 0 0 chr10 137837880 137837903 -7751385 + (TG)n Simple_repeat Simple_repeat 2 24 0 284 286 71 40 chr10 137838066 137838192 -7751096 + L2 LINE L2 3142 3271 -1 216 252 97 78 chr10 137838343 137838446 -7750842 + MIR3 SINE MIR 72 176 -32 268 114 68 0 chr10 137838467 137838511 -7750777 + L2 LINE L2 3267 3313 0 2258 100 3 10 chr10 137839208 137839507 -7749781 + AluSq SINE Alu 1 297 -16 865 137 15 88 chr10 137840525 137840729 -7748559 + MER53 DNA DNA 1 189 0 2313 104 0 16 chr10 137840732 137841040 -7748248 - AluSx SINE Alu -9 303 1 5493 124 43 40 chr10 137842121 137843085 -7746203 - L1MA4A LINE L1 0 6303 5321 2470 75 0 3 chr10 137843085 137843390 -7745898 - AluY SINE Alu -7 304 1 5493 124 43 40 chr10 137843390 137843792 -7745496 - L1MA4A LINE L1 -982 5321 4922 1715 176 3 27 chr10 137843826 137844121 -7745167 + AluJo SINE Alu 1 288 -24 2181 125 26 0 chr10 137844131 137844435 -7744853 + AluSx SINE Alu 1 312 0 327 266 43 58 chr10 137844550 137844689 -7744599 + MIR SINE MIR 3 139 -69 667 187 86 7 chr10 137844745 137844884 -7744404 - MIR SINE MIR -20 242 93 594 231 0 0 chr10 137845214 137845383 -7743905 + (TG)n Simple_repeat Simple_repeat 2 170 0 1818 158 10 10 chr10 137848792 137849090 -7740198 - AluJb SINE Alu -14 298 1 21 57 0 0 chr10 137850145 137850180 -7739108 + AT_rich Low_complexity Low_complexity 1 35 0 193 227 82 41 chr10 137850743 137850840 -7738448 + L2 LINE L2 2837 2937 -335 * 197 309 86 37 chr10 137850837 137850918 -7738370 + L2 LINE L2 3188 3272 0 396 273 62 43 chr10 137850952 137851113 -7738175 + MIR SINE MIR 20 183 -79 2462 93 3 0 chr10 137851277 137851579 -7737709 - AluSp SINE Alu -8 305 3 194 241 194 37 chr10 137851813 137851921 -7737367 - L2 LINE L2 -9 3263 3139 640 194 112 21 chr10 137851954 137852252 -7737036 - MSTD LTR MaLR -3 393 6 2253 132 6 0 chr10 137852584 137852895 -7736393 + AluSq SINE Alu 1 313 0 554 202 52 105 chr10 137853559 137853807 -7735481 - L1ME2 LINE L1 -30 6134 5900 1328 223 68 25 chr10 137853834 137854229 -7735059 - L1ME2 LINE L1 -229 5935 5524 207 0 0 0 chr10 137904683 137904706 -7684582 + (CA)n Simple_repeat Simple_repeat 1 23 0 195 204 0 0 chr10 137904784 137904828 -7684460 + (TA)n Simple_repeat Simple_repeat 2 45 0 2344 85 0 10 chr10 137905883 137906189 -7683099 - AluSx SINE Alu -9 303 1 1527 188 17 6 chr10 137906209 137906554 -7682734 - L1ME2 LINE L1 -1200 4946 4598 21 0 0 0 chr10 137907158 137907179 -7682109 + AT_rich Low_complexity Low_complexity 1 21 0 670 292 51 58 chr10 137907472 137907883 -7681405 + L1MC4a LINE L1 5523 5930 -1878 42 0 0 0 chr10 137908083 137908125 -7681163 + AT_rich Low_complexity Low_complexity 1 42 0 310 223 0 45 chr10 137908133 137908245 -7681043 - L1ME4a LINE L1 -59 6062 5956 1212 186 21 115 chr10 137908698 137909036 -7680252 - AluYb8 SINE Alu -11 307 2 192 261 14 58 chr10 137909123 137909192 -7680096 - L2 LINE L2 -1 3271 3206 419 347 71 6 chr10 137909344 137909514 -7679774 - MIR SINE MIR -16 246 66 212 296 153 10 chr10 137909519 137909617 -7679671 - MIR SINE MIR -74 188 77 481 275 141 36 chr10 137910093 137910233 -7679055 + MLT1K LTR MaLR 169 293 -295 2673 118 36 7 chr10 137910233 137910649 -7678639 + MSTA LTR MaLR 1 428 0 481 275 141 36 chr10 137910649 137910784 -7678504 + MLT1K LTR MaLR 293 473 -115 1516 55 0 0 chr10 137911198 137911380 -7677908 - AluY SINE Alu -7 304 123 273 291 0 12 chr10 137911383 137911469 -7677819 - MER63 DNA MER1_type 0 1062 978 421 263 17 0 chr10 137911473 137911591 -7677697 - MER63 DNA MER1_type -316 746 1 2540 250 36 18 chr10 137911630 137912631 -7676657 - L1ME3 LINE L1 -23 6139 5119 289 253 102 121 chr10 137913836 137914002 -7675286 - MIR SINE MIR -71 191 29 514 205 50 2 chr10 137914810 137915023 -7674265 + MSTD LTR MaLR 1 262 -134 264 167 0 0 chr10 137915132 137915180 -7674108 + (TA)n Simple_repeat Simple_repeat 1 48 0 1265 184 142 6 chr10 137915287 137915619 -7673669 + MLT1B LTR MaLR 1 377 -13 350 186 43 0 chr10 137915739 137915809 -7673479 + MLT1L LTR MaLR 198 270 -345 304 189 89 11 chr10 137915966 137916056 -7673232 + MLT1L LTR MaLR 477 573 -42 32 43 0 0 chr10 137916482 137916528 -7672760 + AT_rich Low_complexity Low_complexity 1 46 0 426 62 0 0 chr10 137916528 137916592 -7672696 - L1MA1 LINE L1 0 6302 6239 2681 203 35 5 chr10 137916825 137917405 -7671883 + L1MB7 LINE L1 5575 6171 -13 2106 111 0 0 chr10 137917541 137917820 -7671468 - AluSx SINE Alu -33 279 1 4694 145 28 31 chr10 137917846 137918713 -7670575 - MER6 DNA MER2_type 0 865 2 1759 189 31 3 chr10 137919052 137919439 -7669849 - L1MC3 LINE L1 -8 7777 7380 2218 106 0 0 chr10 137919517 137919810 -7669478 - AluSx SINE Alu -19 293 1 324 185 49 0 chr10 137919816 137919897 -7669391 - L1ME3A LINE L1 -67 6103 6019 312 221 8 107 chr10 137919923 137919975 -7669313 - L1MC4 LINE L1 -1254 6788 6753 2094 177 10 0 chr10 137919975 137920359 -7668929 + MLT1B LTR MaLR 1 388 -2 312 221 8 107 chr10 137920359 137920428 -7668860 - L1MC4 LINE L1 -1289 6753 6679 693 305 59 63 chr10 137920530 137920607 -7668681 + L1M4 LINE L1 2115 2191 -3955 2212 126 10 0 chr10 137920607 137920916 -7668372 + AluSx SINE Alu 1 312 0 693 305 59 63 chr10 137920916 137921484 -7667804 + L1M4 LINE L1 2191 2757 -3389 332 324 82 27 chr10 137921534 137922764 -7666524 + L1M4 LINE L1 2859 4156 -1990 1150 191 0 0 chr10 137922863 137923073 -7666215 + MER2 DNA MER2_type 1 210 -135 8784 187 35 5 chr10 137923091 137925414 -7663874 + L1PA16 LINE L1 2723 5202 -1667 225 94 0 0 chr10 137925414 137925446 -7663842 + (CA)n Simple_repeat Simple_repeat 2 33 0 8784 187 35 5 chr10 137925446 137927157 -7662131 + L1PA16 LINE L1 5202 6859 -10 2366 85 0 28 chr10 137927157 137927512 -7661776 + AluSq SINE Alu 1 313 0 28 0 0 0 chr10 137927566 137927594 -7661694 + AT_rich Low_complexity Low_complexity 1 28 0 235 288 84 5 chr10 137927654 137927845 -7661443 + L1M4 LINE L1 4279 4484 -1662 400 348 67 18 chr10 137927920 137928248 -7661040 + L1M4 LINE L1 4493 4836 -1310 236 260 0 0 chr10 137928419 137928469 -7660819 - MER63 DNA MER1_type 0 1688 1639 366 253 20 20 chr10 137928851 137928950 -7660338 + MER5B DNA MER1_type 5 103 -75 212 233 0 0 chr10 137928942 137928985 -7660303 - MER5B DNA MER1_type -135 43 1 * 886 163 0 0 chr10 137929711 137929852 -7659436 - FLAM_C SINE Alu -2 141 1 1899 238 84 18 chr10 137929916 137930487 -7658801 - MLT1L LTR MaLR -2 613 5 2014 27 0 0 chr10 137930538 137930762 -7658526 + L1PA5 LINE L1 5931 6154 0 636 277 83 14 chr10 137930862 137931151 -7658137 - HAL1 LINE L1 -848 1659 1351 483 207 0 0 chr10 137931308 137931395 -7657893 + MER58B DNA MER1_type 1 87 -254 791 149 137 19 chr10 137931401 137931562 -7657726 + MSTA LTR MaLR 200 379 -49 1247 162 51 8 chr10 137931572 137931806 -7657482 + MER58B DNA MER1_type 97 340 -1 1668 151 120 0 chr10 137931886 137932144 -7657144 - AluJb SINE Alu -13 289 1 255 268 0 0 chr10 137932252 137932323 -7656965 - L1ME3A LINE L1 -25 6145 6075 3900 245 82 43 chr10 137932324 137934420 -7654868 - L1MD1 LINE L1 -351 5825 3618 1112 291 79 19 chr10 137934576 137935046 -7654242 + L2 LINE L2 2385 2882 -432 223 304 18 0 chr10 137935183 137935239 -7654049 + L2 LINE L2 3206 3262 -10 1677 260 40 12 chr10 137935532 137936282 -7653006 - L2 LINE L2 -21 3292 2527 1863 246 20 61 chr10 137936338 137936408 -7652880 - L1MD1 LINE L1 -5378 692 621 2347 91 0 7 chr10 137936408 137936705 -7652583 - AluSx SINE Alu -17 295 1 1863 246 20 61 chr10 137936705 137937275 -7652013 - L1MD1 LINE L1 -5449 621 78 1256 275 139 17 chr10 137937295 137937761 -7651527 - L2 LINE L2 -744 2570 2048 810 136 42 0 chr10 137937762 137937880 -7651408 + FLAM_C SINE Alu 1 123 -20 632 168 133 82 chr10 137937947 137938064 -7651224 - L2 LINE L2 -1301 2013 1881 2212 120 7 0 chr10 137938064 137938372 -7650916 - AluSq SINE Alu -3 310 1 632 168 133 82 chr10 137938372 137938450 -7650838 - L2 LINE L2 -1433 1881 1808 507 291 129 57 chr10 137939371 137939721 -7649567 + L2 LINE L2 2920 3294 -19 205 235 78 0 chr10 137939719 137939770 -7649518 - MIR SINE MIR -109 153 99 * 885 290 114 46 chr10 137939863 137940322 -7648966 + MLT1H1 LTR MaLR 3 502 -53 567 192 212 14 chr10 137940322 137940468 -7648820 - MER96 DNA MER1_type 0 175 1 885 290 114 46 chr10 137940468 137940526 -7648762 + MLT1H1 LTR MaLR 502 555 0 184 242 0 0 chr10 137940528 137940561 -7648727 + L2 LINE L2 3219 3251 -21 289 203 0 72 chr10 137940726 137940795 -7648493 - L2 LINE L2 -9 3304 3241 891 139 7 0 chr10 137941048 137941185 -7648103 + FLAM_C SINE Alu 1 138 -5 2225 145 25 30 chr10 137941445 137941811 -7647477 + THE1B LTR MaLR 1 364 0 381 228 123 57 chr10 137942574 137942785 -7646503 - MER102b DNA MER1_type 0 341 117 253 238 55 85 chr10 137942841 137943005 -7646283 + MIR3 SINE MIR 29 187 -21 195 276 35 0 chr10 137943498 137943556 -7645732 - MIR SINE MIR -67 141 82 353 301 135 26 chr10 137943739 137943932 -7645356 - MIR SINE MIR -20 242 29 259 281 31 62 chr10 137943940 137944068 -7645220 - MIR3 SINE MIR -27 181 58 745 199 29 0 chr10 137948223 137948359 -7640929 - MER58B DNA MER1_type 0 341 202 476 229 7 71 chr10 137948429 137948569 -7640719 - L2 LINE L2 -1 3312 3182 513 232 5 108 chr10 137948927 137949112 -7640176 + MIR SINE MIR 90 255 -7 1430 350 58 13 chr10 137949455 137950453 -7638835 + ERVL LTR ERVL 3841 4883 -881 2201 171 51 80 chr10 137950471 137951043 -7638245 + L1MC3 LINE L1 7224 7778 -7 2181 104 16 13 chr10 137951403 137951712 -7637576 - AluSg SINE Alu 0 310 1 3829 200 4 38 chr10 137951852 137952752 -7636536 - L1PB1 LINE L1 -1024 5122 4253 6201 92 38 3 chr10 137952756 137953400 -7635888 + L1PB1 LINE L1 5128 5816 -335 225 0 0 0 chr10 137953400 137953425 -7635863 + (TA)n Simple_repeat Simple_repeat 2 26 0 6201 92 38 3 chr10 137953425 137953772 -7635516 + L1PB1 LINE L1 5816 6149 -2 398 63 0 48 chr10 137953782 137953845 -7635443 + L1PB1 LINE L1 6090 6149 -2 280 143 107 0 chr10 137953926 137953982 -7635306 + LTR33 LTR ERVL 451 512 -9 383 278 76 7 chr10 137953991 137954135 -7635153 - HAL1 LINE L1 -923 1584 1431 634 249 171 86 chr10 137954193 137954738 -7634550 - MLT1L LTR MaLR 0 615 25 597 275 71 81 chr10 137954795 137955398 -7633890 - HAL1 LINE L1 -1166 1341 745 278 275 61 61 chr10 137955850 137955981 -7633307 - HAL1 LINE L1 -2371 136 6 1560 195 7 14 chr10 137956042 137956334 -7632954 - AluJb SINE Alu -21 291 2 2537 184 28 2 chr10 137956343 137956811 -7632477 - L1MB2 LINE L1 -2 6169 5690 245 204 112 82 chr10 137957001 137957099 -7632189 - MIR SINE MIR -92 170 70 261 147 27 80 chr10 137958760 137958835 -7630453 + CT-rich Low_complexity Low_complexity 1 71 0 982 188 0 39 chr10 137959248 137959429 -7629859 - FAM SINE Alu 0 175 2 2155 103 33 3 chr10 137959533 137959834 -7629454 + AluSx SINE Alu 1 310 -2 410 266 53 61 chr10 137960246 137960345 -7628943 - L1MB2 LINE L1 -621 5541 5443 2300 119 0 0 chr10 137960345 137960657 -7628631 + AluSx SINE Alu 1 312 0 410 266 53 61 chr10 137960657 137960820 -7628468 - L1MB2 LINE L1 -719 5443 5281 * 741 265 52 35 chr10 137960819 137961242 -7628046 + L1MD3 LINE L1 4075 4504 -1642 692 296 91 37 chr10 137961238 137961340 -7627948 + L1MD3 LINE L1 5383 5478 -2330 * 3102 148 79 2 chr10 137961340 137961378 -7627910 - MLT2B1 LTR ERVL -2 518 484 381 70 0 0 chr10 137961378 137961435 -7627853 + (TA)n Simple_repeat Simple_repeat 1 57 0 3102 148 79 2 chr10 137961435 137961877 -7627411 - MLT2B1 LTR ERVL -36 484 1 692 296 91 37 chr10 137961877 137962252 -7627036 + L1MD3 LINE L1 5478 5800 -2008 475 211 31 23 chr10 137962258 137962386 -7626902 - LTR16C LTR ERVL 0 491 363 2219 95 7 30 chr10 137962692 137962996 -7626292 - AluSq SINE Alu -16 297 1 993 220 6 0 chr10 137963107 137963289 -7625999 - MER5A DNA MER1_type -5 184 2 267 342 42 0 chr10 137964187 137964307 -7624981 + L2 LINE L2 2934 3058 -214 1607 271 71 4 chr10 137965059 137965594 -7623694 + L1ME3A LINE L1 5597 6167 -3 324 287 70 20 chr10 137965823 137966067 -7623221 + L1MC4a LINE L1 4915 5170 -976 2187 176 47 11 chr10 137966200 137966581 -7622707 - MSTD LTR MaLR -1 395 1 1753 258 80 53 chr10 137966584 137967411 -7621877 + L1MC4a LINE L1 5267 6115 -1693 1774 126 0 98 chr10 137968090 137968227 -7621061 + AluJb SINE Alu 15 103 -209 2472 46 0 30 chr10 137968227 137968530 -7620758 + AluY SINE Alu 1 294 -17 1774 126 0 98 chr10 137968530 137968718 -7620570 + AluJb SINE Alu 103 308 -4 22 0 0 0 chr10 137969063 137969085 -7620203 + AT_rich Low_complexity Low_complexity 1 22 0 293 0 27 0 chr10 137969651 137969688 -7619600 + (GA)n Simple_repeat Simple_repeat 1 38 0 234 294 92 9 chr10 137969800 137969909 -7619379 + MIR SINE MIR 26 143 -65 321 254 116 36 chr10 137970143 137970367 -7618921 + L2 LINE L2 2713 2954 -360 291 247 169 0 chr10 137970445 137970534 -7618754 + L2 LINE L2 3210 3313 0 2177 152 48 25 chr10 137970935 137971291 -7617997 - THE1B LTR MaLR 0 364 1 11273 80 68 1 chr10 137971291 137972773 -7616515 - THE1B-int LTR MaLR 0 1580 1 2188 128 54 25 chr10 137972774 137973127 -7616161 - THE1B LTR MaLR -1 363 1 517 119 0 0 chr10 137973746 137973813 -7615475 + AluS SINE Alu 2 68 -245 2204 126 0 0 chr10 137974156 137974457 -7614831 - AluSx SINE Alu -11 301 1 277 267 35 74 chr10 137974874 137975083 -7614205 - L2 LINE L2 -4 3268 2978 232 319 22 22 chr10 137975114 137975249 -7614039 + LTR33 LTR ERVL 384 518 -3 372 250 20 0 chr10 137975876 137975976 -7613312 - MLT1J1 LTR MaLR 0 446 345 254 246 15 15 chr10 137976087 137976152 -7613136 - MLT1I LTR MaLR -249 160 96 6224 217 67 29 chr10 137976487 137978766 -7610522 + L1M4 LINE L1 1 2192 -4452 2368 109 7 0 chr10 137978766 137979070 -7610218 + AluSx SINE Alu 1 306 -6 6224 217 67 29 chr10 137979070 137980927 -7608361 + L1M4 LINE L1 2192 4414 -2230 310 265 24 0 chr10 137980930 137981013 -7608275 + MIR SINE MIR 47 131 -131 203 206 0 103 chr10 137981086 137981154 -7608134 - MER5A DNA MER1_type -78 111 51 209 267 0 0 chr10 137981782 137981827 -7607461 + L2 LINE L2 3261 3305 -8 24 32 0 0 chr10 137982939 137982970 -7606318 + AT_rich Low_complexity Low_complexity 1 31 0 1684 115 6 101 chr10 137984037 137984403 -7604885 - L1MB8 LINE L1 -6 6172 5842 2451 94 0 0 chr10 137986046 137986353 -7602935 + AluSq SINE Alu 1 307 -6 2319 124 5 24 chr10 137987075 137987454 -7601834 - MLT1B LTR MaLR -14 376 5 904 217 25 0 chr10 137987562 137987765 -7601523 + MER63A DNA MER1_type 3 210 0 907 165 61 0 chr10 137988359 137988523 -7600765 + MER20 DNA MER1_type 4 177 -42 743 306 59 36 chr10 137988625 137989513 -7599775 + L1MEd LINE L1 596 1538 -4772 803 190 78 17 chr10 137990154 137990386 -7598902 - LTR16C LTR ERVL 0 491 246 7452 189 34 8 chr10 137991485 137992115 -7597173 - L1PA15 LINE L1 -1 6815 6203 1633 217 10 0 chr10 137992115 137992414 -7596874 - AluJb SINE Alu -10 302 1 7452 189 34 8 chr10 137992414 137993695 -7595593 - L1PA15 LINE L1 -613 6203 4796 279 0 0 0 chr10 137993695 137993726 -7595562 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 7452 189 34 8 chr10 137993726 137994188 -7595100 - L1PA15 LINE L1 -2020 4796 4348 5158 229 33 22 chr10 137994293 137994998 -7594290 - L1PA15 LINE L1 -2950 3847 3151 2315 98 0 7 chr10 137994998 137995293 -7593995 - AluSq SINE Alu -20 293 1 5158 229 33 22 chr10 137995293 137997082 -7592206 - L1PA15 LINE L1 -3646 3151 1327 2073 286 19 45 chr10 137997116 137997909 -7591379 - L1PA15 LINE L1 -6011 776 5 392 320 115 44 chr10 137997994 137998609 -7590679 + L1MEd LINE L1 2412 3070 -3059 271 156 62 31 chr10 137998610 137998674 -7590614 + L1MC1 LINE L1 6268 6333 0 623 346 55 27 chr10 137998690 137999213 -7590075 + L1MEd LINE L1 3093 3630 -2499 621 266 68 8 chr10 137999712 137999975 -7589313 - L1MC/D LINE L1 -2215 5527 5249 519 319 130 40 chr10 138000005 138000829 -7588459 - L1MC/D LINE L1 -872 5208 4261 2545 80 3 0 chr10 138000829 138001140 -7588148 - AluSp SINE Alu -1 312 1 519 319 130 40 chr10 138001140 138001381 -7587907 - L1MC/D LINE L1 -1819 4261 4043 809 304 17 17 chr10 138001382 138001622 -7587666 - MIR SINE MIR -2 260 21 970 277 46 33 chr10 138001666 138002395 -7586893 - L1ME LINE L1 -4834 1246 526 432 312 12 18 chr10 138002695 138002865 -7586423 - L1ME LINE L1 -5626 444 276 1960 129 7 14 chr10 138003029 138003316 -7585972 - AluJb SINE Alu -18 294 10 309 51 0 0 chr10 138003583 138003622 -7585666 + (TTCC)n Simple_repeat Simple_repeat 2 40 0 1355 157 32 0 chr10 138003626 138003843 -7585445 - AluJb SINE Alu -4 308 85 898 228 22 0 chr10 138003843 138004071 -7585217 - Charlie1b DNA MER1_type -211 312 80 24 32 0 0 chr10 138004167 138004198 -7585090 + AT_rich Low_complexity Low_complexity 1 31 0 315 231 32 92 chr10 138004311 138004452 -7584836 - MIR SINE MIR -59 149 20 2065 152 3 0 chr10 138006130 138006439 -7582849 - AluJb SINE Alu -2 310 1 204 40 0 0 chr10 138006469 138006494 -7582794 + (TG)n Simple_repeat Simple_repeat 2 26 0 1843 118 4 4 chr10 138006812 138007066 -7582222 + AluSc SINE Alu 37 290 -19 2819 243 80 16 chr10 138007312 138008478 -7580810 - L1M4 LINE L1 -2596 3550 2311 40 0 0 0 chr10 138008520 138008560 -7580728 + AT_rich Low_complexity Low_complexity 1 40 0 408 253 0 0 chr10 138008607 138008773 -7580515 + (TA)n Simple_repeat Simple_repeat 1 166 0 1255 135 4 25 chr10 138008794 138009039 -7580249 - L1MA5A LINE L1 -22 6275 6036 403 319 116 45 chr10 138011719 138012073 -7577215 - L3 LINE CR1 -23 1554 1176 1986 142 0 39 chr10 138012359 138012707 -7576581 - AluSx SINE Alu 0 312 1 14127 174 62 20 chr10 138013072 138017481 -7571807 - L1MA3 LINE L1 -2 7722 2549 1694 171 0 8 chr10 138017481 138017744 -7571544 - AluSx SINE Alu -43 269 9 14127 174 62 20 chr10 138017744 138020331 -7568957 - L1MA3 LINE L1 -5175 2549 70 2171 172 10 15 chr10 138020707 138021109 -7568179 - L1M1 LINE L1 -7149 416 17 242 275 175 8 chr10 138021135 138021255 -7568033 - MIR3 SINE MIR -67 141 2 836 239 141 23 chr10 138022895 138023292 -7565996 - MER113 DNA MER1_type? -44 477 34 193 354 46 0 chr10 138023322 138023387 -7565901 + MIR SINE MIR 40 107 -155 2673 205 56 19 chr10 138023785 138024241 -7565047 - L1ME1 LINE L1 -89 6077 5639 2308 113 0 0 chr10 138024241 138024551 -7564737 + AluSg SINE Alu 1 310 0 2673 205 56 19 chr10 138024551 138024974 -7564314 - L1ME1 LINE L1 -527 5639 5162 211 51 0 51 chr10 138024975 138025014 -7564274 + (TTTTA)n Simple_repeat Simple_repeat 4 40 0 561 216 9 9 chr10 138025022 138025138 -7564150 - FLAM_C SINE Alu -27 116 1 2042 205 13 35 chr10 138025139 138025686 -7563602 - L1ME1 LINE L1 -979 5167 4633 2239 56 39 18 chr10 138026231 138026516 -7562772 + AluY SINE Alu 2 292 -19 543 270 0 16 chr10 138027202 138027328 -7561960 - MIR SINE MIR -111 151 28 306 73 0 0 chr10 138027792 138027833 -7561455 + (CA)n Simple_repeat Simple_repeat 1 41 0 439 333 0 0 chr10 138028469 138028592 -7560696 + (CA)n Simple_repeat Simple_repeat 2 124 0 265 232 54 0 chr10 138028592 138028648 -7560640 - MER4-int LTR ERV1 -5428 1170 1112 233 265 88 0 chr10 138029306 138029374 -7559914 + MIR SINE MIR 65 138 -70 2067 151 9 29 chr10 138029375 138029719 -7559569 + MER1B DNA MER1_type 1 337 -2 225 240 20 0 chr10 138029737 138029787 -7559501 + MIR3 SINE MIR 147 197 -11 313 301 70 55 chr10 138030798 138030949 -7558339 + L1ME4a LINE L1 5649 5807 -314 1874 190 11 14 chr10 138030949 138031313 -7557975 - MLT1A1 LTR MaLR -2 363 1 313 301 70 55 chr10 138031313 138031417 -7557871 + L1ME4a LINE L1 5807 5908 -213 273 305 74 93 chr10 138031423 138031898 -7557390 - L2 LINE L2 0 3272 2807 292 351 131 16 chr10 138032085 138032657 -7556631 - L2 LINE L2 -1493 1821 1184 329 325 19 65 chr10 138032723 138032877 -7556411 + L1ME4a LINE L1 5954 6100 -21 1160 228 4 11 chr10 138033036 138033304 -7555984 - L1MD3 LINE L1 0 7995 7730 181 276 0 52 chr10 138033576 138033634 -7555654 - MIR SINE MIR 0 262 208 1744 204 63 34 chr10 138033644 138034091 -7555197 - MLT1C LTR MaLR -2 465 6 346 209 35 35 chr10 138034106 138034192 -7555096 - MIR SINE MIR -64 198 113 1968 116 61 0 chr10 138034192 138034485 -7554803 + AluSx SINE Alu 1 311 -1 184 154 115 19 chr10 138034491 138034543 -7554745 - MIR SINE MIR -79 129 73 291 200 33 56 chr10 138035427 138035517 -7553771 - MLT1K LTR MaLR -32 556 469 678 235 84 34 chr10 138035959 138036162 -7553126 + MIR SINE MIR 51 262 0 1452 147 0 32 chr10 138036340 138036592 -7552696 + AluJb SINE Alu 1 244 -68 216 95 48 24 chr10 138037050 138037092 -7552196 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 252 0 0 0 chr10 138037273 138037301 -7551987 + (TG)n Simple_repeat Simple_repeat 2 29 0 1928 153 0 3 chr10 138037489 138037796 -7551492 - AluSx SINE Alu -6 306 1 378 341 37 0 chr10 138038095 138038259 -7551029 + L1ME4a LINE L1 5653 5822 -299 249 272 58 10 chr10 138038384 138038487 -7550801 + L1ME4a LINE L1 5831 5938 -183 1379 193 125 23 chr10 138038998 138039351 -7549937 - MLT1B LTR MaLR 0 390 2 244 300 150 56 chr10 138039353 138039620 -7549668 + L2 LINE L2 1983 2274 -1040 827 231 92 0 chr10 138039639 138039834 -7549454 + MER20 DNA MER1_type 7 219 0 937 147 11 66 chr10 138040963 138041235 -7548053 - AluSg SINE Alu -14 296 40 284 249 17 22 chr10 138041426 138041607 -7547681 + CT-rich Low_complexity Low_complexity 1 180 0 4188 186 44 29 chr10 138041790 138042829 -7546459 - Zaphod DNA AcHobo -1463 2568 1514 5548 86 26 19 chr10 138043002 138044061 -7545227 - SVA Other Other -520 1033 48 2086 84 0 7 chr10 138046019 138046294 -7542994 + AluY SINE Alu 1 273 -38 2230 103 0 6 chr10 138047386 138047698 -7541590 + AluY SINE Alu 1 310 -1 385 276 62 74 chr10 138047781 138048038 -7541250 - L1ME4a LINE L1 -93 6028 5775 1706 138 7 28 chr10 138048714 138049041 -7540247 + AluSx SINE Alu 1 321 0 306 345 92 0 chr10 138049703 138049822 -7539466 + L1ME1 LINE L1 331 460 -5610 613 271 24 12 chr10 138050092 138050258 -7539030 + MLT2F LTR ERVL 155 322 -341 363 260 39 0 chr10 138050257 138050361 -7538927 + MLT2F LTR ERVL 527 634 -29 * 8312 221 100 22 chr10 138050397 138051466 -7537822 + L1ME1 LINE L1 2227 3212 -2888 1706 126 4 8 chr10 138051466 138051720 -7537568 - AluSx SINE Alu -59 253 1 8312 221 100 22 chr10 138051720 138052069 -7537219 + L1ME1 LINE L1 3212 3533 -2567 1938 156 113 30 chr10 138052069 138052467 -7536821 + Tigger2a DNA MER2_type 2 432 -2 8312 221 100 22 chr10 138052467 138053435 -7535853 + L1ME1 LINE L1 3533 4424 -1676 1801 139 7 17 chr10 138053435 138053730 -7535558 - AluSx SINE Alu -20 292 1 8312 221 100 22 chr10 138053730 138054913 -7534375 + L1ME1 LINE L1 4424 6092 -8 1063 82 0 44 chr10 138055198 138055356 -7533932 + L1MA2 LINE L1 6154 6304 0 303 370 55 12 chr10 138055438 138055692 -7533596 - L3b LINE CR1 -96 1487 1223 218 320 101 12 chr10 138055837 138055932 -7533356 + MIR SINE MIR 33 136 -72 5523 119 7 31 chr10 138056785 138057488 -7531800 + L1PA15 LINE L1 5335 6016 -149 2160 117 7 0 chr10 138057488 138057797 -7531491 + AluSx SINE Alu 1 311 -1 5523 119 7 31 chr10 138057797 138057944 -7531344 + L1PA15 LINE L1 6016 6165 0 535 248 35 75 chr10 138057947 138058229 -7531059 + L1MC5 LINE L1 7659 7929 -32 409 277 7 58 chr10 138058625 138058780 -7530508 + MIR SINE MIR 11 157 -105 25 31 0 0 chr10 138058964 138058996 -7530292 + AT_rich Low_complexity Low_complexity 1 32 0 297 106 21 0 chr10 138059016 138059063 -7530225 + L1MB4 LINE L1 5432 5479 -821 1766 167 3 7 chr10 138059073 138059373 -7529915 + AluJb SINE Alu 6 304 -8 1929 134 0 20 chr10 138059395 138059694 -7529594 + AluJb SINE Alu 1 293 -19 182 37 37 0 chr10 138059697 138059724 -7529564 + (CAA)n Simple_repeat Simple_repeat 2 29 0 388 217 12 0 chr10 138059728 138059811 -7529477 + L1MB4 LINE L1 5483 5566 -614 1022 165 42 0 chr10 138059811 138060023 -7529265 + L1MB4 LINE L1 5960 6180 0 198 250 192 10 chr10 138060112 138060216 -7529072 + MIR SINE MIR 1 123 -139 198 0 0 0 chr10 138060404 138060426 -7528862 + (TTGTG)n Simple_repeat Simple_repeat 2 23 0 275 233 105 23 chr10 138061280 138061366 -7527922 + MIR SINE MIR 74 166 -96 839 211 54 11 chr10 138062088 138062273 -7527015 + MIR SINE MIR 22 214 -48 464 318 152 42 chr10 138063717 138064486 -7524802 + L2 LINE L2 2383 3224 -48 183 87 0 0 chr10 138066145 138066168 -7523120 + L2 LINE L2 3267 3289 -24 276 30 0 0 chr10 138066176 138066209 -7523079 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 236 253 137 101 chr10 138066828 138067164 -7522124 + L2 LINE L2 2897 3244 -69 343 226 359 10 chr10 138067199 138067394 -7521894 + LTR50 LTR ERVL 1 263 -532 627 120 0 0 chr10 138067419 138067527 -7521761 + (TTTTC)n Simple_repeat Simple_repeat 1 108 0 268 189 27 54 chr10 138067548 138067622 -7521666 + LTR50 LTR ERVL 498 569 -226 275 272 74 0 chr10 138067776 138067857 -7521431 + LTR33A LTR ERVL 437 523 0 625 283 102 0 chr10 138067884 138068050 -7521238 - MIR SINE MIR -21 241 59 209 258 0 16 chr10 138069935 138069997 -7519291 + C-rich Low_complexity Low_complexity 2 62 0 345 291 120 46 chr10 138070565 138070740 -7518548 + MIR SINE MIR 8 195 -67 2263 125 33 39 chr10 138070973 138071333 -7517955 + THE1B LTR MaLR 1 358 -6 474 287 106 21 chr10 138071553 138071768 -7517520 - MIR SINE MIR 0 262 31 247 336 70 8 chr10 138072529 138072657 -7516631 - MIR SINE MIR -43 219 84 255 136 76 45 chr10 138073390 138073456 -7515832 - MER91C DNA MER1_type -49 91 24 1927 81 4 0 chr10 138075119 138075377 -7513911 + L1PA13 LINE L1 5903 6161 -2 2013 133 7 3 chr10 138075379 138075681 -7513607 + AluSx SINE Alu 1 303 -9 233 260 0 0 chr10 138075932 138075982 -7513306 - L2 LINE L2 -8 3305 3256 193 348 106 28 chr10 138077784 138077925 -7511363 - L2 LINE L2 0 3272 3121 189 294 73 78 chr10 138077944 138078162 -7511126 - L2 LINE L2 -11 3261 3045 448 255 62 21 chr10 138078414 138078559 -7510729 + L2 LINE L2 3158 3308 -5 458 243 46 0 chr10 138078714 138078852 -7510436 - MIR SINE MIR -65 143 48 1166 197 50 9 chr10 138078886 138079193 -7510095 + MLT2D LTR ERVL 25 414 0 501 143 0 0 chr10 138082016 138082126 -7507162 + AluSg/x SINE Alu 211 320 0 267 252 0 68 chr10 138082189 138082292 -7506996 + MARNA DNA Mariner 223 318 -268 516 141 0 0 chr10 138082499 138082609 -7506679 + AluSg/x SINE Alu 213 322 0 185 257 152 38 chr10 138083411 138083516 -7505772 - L2 LINE L2 -14 3258 3142 417 260 132 9 chr10 138083579 138083765 -7505523 - MIR SINE MIR -49 159 5 327 305 35 46 chr10 138084105 138084302 -7504986 + L1M4 LINE L1 2580 2774 -3372 229 250 26 13 chr10 138084659 138084735 -7504553 + L2 LINE L2 3187 3263 -9 197 219 0 0 chr10 138084936 138084977 -7504311 - MIR SINE MIR -109 153 113 345 270 10 30 chr10 138085035 138085135 -7504153 - MIR SINE MIR -3 259 162 2323 92 20 0 chr10 138085155 138085500 -7503788 - AluSp SINE Alu 0 352 2 288 241 51 13 chr10 138085544 138085623 -7503665 - MIR SINE MIR -161 101 20 1281 219 22 60 chr10 138086612 138087014 -7502274 - L1ME1 LINE L1 -5 6161 5775 247 269 30 47 chr10 138087024 138087194 -7502094 - L1M4b LINE L1 -6396 459 44 1344 167 14 0 chr10 138088605 138088820 -7500468 - MER20 DNA MER1_type 0 219 2 273 57 0 0 chr10 138089199 138089234 -7500054 + (GA)n Simple_repeat Simple_repeat 1 35 0 533 244 0 32 chr10 138089429 138089552 -7499736 + L2 LINE L2 3154 3272 0 239 256 70 108 chr10 138091510 138091639 -7497649 + MLT1K LTR MaLR 57 180 -408 225 265 108 66 chr10 138091676 138091842 -7497446 + MLT1K LTR MaLR 303 475 -113 1768 170 16 19 chr10 138091850 138092173 -7497115 - L1MC3 LINE L1 -170 7615 7294 1574 193 7 0 chr10 138092190 138092480 -7496808 - MER90 LTR ERV1 0 614 323 22 0 0 0 chr10 138092849 138092871 -7496417 + AT_rich Low_complexity Low_complexity 1 22 0 871 264 81 3 chr10 138092966 138093261 -7496027 - MER90 LTR ERV1 -257 318 1 243 276 0 13 chr10 138093332 138093408 -7495880 - MLT1F1 LTR MaLR -448 119 45 329 267 82 37 chr10 138094158 138094293 -7494995 + MIR SINE MIR 15 155 -107 2175 173 22 61 chr10 138095495 138095896 -7493392 - MSTA LTR MaLR -1 427 43 565 43 0 0 chr10 138095896 138095966 -7493322 - L1PA2 LINE L1 -5 6150 6081 2175 173 22 61 chr10 138095966 138096008 -7493280 - MSTA LTR MaLR -385 43 1 21 0 0 0 chr10 138096041 138096062 -7493226 + AT_rich Low_complexity Low_complexity 1 21 0 403 257 59 0 chr10 138096511 138096612 -7492676 + MIR SINE MIR 42 148 -60 373 306 16 8 chr10 138096613 138096734 -7492554 + GA-rich Low_complexity Low_complexity 3 124 0 193 298 18 18 chr10 138096734 138096791 -7492497 + L3 LINE CR1 1513 1569 -8 819 211 54 11 chr10 138097628 138097813 -7491475 + MIR SINE MIR 22 214 -48 259 233 105 23 chr10 138098918 138099004 -7490284 - MIR SINE MIR -96 166 74 283 56 0 0 chr10 138099519 138099555 -7489733 - AluYb8 SINE Alu -168 140 105 824 70 0 0 chr10 138099598 138099698 -7489590 - AluYb8 SINE Alu -211 100 1 331 234 51 57 chr10 138100607 138100765 -7488523 - MLT1K LTR MaLR -32 556 400 3399 200 65 25 chr10 138101212 138102082 -7487206 + L1ME1 LINE L1 5254 6158 -8 1114 82 0 44 chr10 138102367 138102525 -7486763 + L1MA2 LINE L1 6154 6304 0 262 370 55 12 chr10 138102607 138102861 -7486427 - L3b LINE CR1 -96 1487 1223 183 325 100 12 chr10 138103021 138103101 -7486187 + MIR SINE MIR 49 135 -127 288 250 38 0 chr10 138104641 138104721 -7484567 - MIR SINE MIR -1 261 179 1545 270 55 18 chr10 138104791 138105246 -7484042 + MER20B DNA MER1_type 3 474 -309 509 308 133 37 chr10 138106440 138107141 -7482147 + HAL1b LINE L1 11 778 -570 27 0 0 0 chr10 138107219 138107246 -7482042 + AT_rich Low_complexity Low_complexity 1 27 0 300 293 134 40 chr10 138107859 138108720 -7480568 + L1 LINE L1 2453 3394 -2752 390 360 74 15 chr10 138109076 138109401 -7479887 + L1 LINE L1 4084 4427 -1719 2015 138 27 0 chr10 138109582 138109879 -7479409 - AluSg SINE Alu -5 305 1 590 269 132 41 chr10 138109897 138110684 -7478604 + L1MC4a LINE L1 2417 3275 -2871 2189 161 170 156 chr10 138111258 138111664 -7477624 + L1MC3 LINE L1 6666 7065 -720 259 310 0 26 chr10 138111664 138111780 -7477508 + MLT1F1 LTR MaLR 13 125 -442 2189 161 170 156 chr10 138111780 138112171 -7477117 + L1MC3 LINE L1 7065 7591 -194 2334 84 10 0 chr10 138112171 138112467 -7476821 + AluSg SINE Alu 1 299 -11 922 201 90 16 chr10 138112481 138112811 -7476477 + MSTD LTR MaLR 1 365 0 768 175 97 0 chr10 138112819 138112973 -7476315 + L1MC3 LINE L1 7606 7774 -11 2336 99 3 10 chr10 138112975 138113287 -7476001 + AluSx SINE Alu 1 310 -2 249 328 17 26 chr10 138113593 138113709 -7475579 + L1MC4a LINE L1 3618 3732 -2414 2072 125 67 12 chr10 138114023 138114351 -7474937 + MER47A DNA MER2_type 21 366 0 415 350 70 10 chr10 138114501 138114987 -7474301 + L1MC4a LINE L1 4727 5241 -905 510 264 38 41 chr10 138115177 138115439 -7473849 + L1MC4a LINE L1 5694 5963 -211 349 207 144 0 chr10 138116131 138116242 -7473046 + MIR SINE MIR 111 237 -25 386 173 86 0 chr10 138116357 138116438 -7472850 - MER53 DNA DNA 0 189 102 181 336 64 27 chr10 138116512 138116622 -7472666 + L2 LINE L2 3182 3295 -18 270 0 0 0 chr10 138118637 138118667 -7470621 + (TAA)n Simple_repeat Simple_repeat 2 31 0 226 289 164 39 chr10 138122920 138123024 -7466264 - MIR3 SINE MIR -53 155 39 1792 144 43 4 chr10 138123554 138123831 -7465457 + AluSx SINE Alu 1 288 -24 327 202 0 0 chr10 138123832 138123921 -7465367 + GA-rich Low_complexity Low_complexity 1 89 0 2360 128 5 16 chr10 138124564 138124932 -7464356 - L1PA15 LINE L1 0 6165 5802 324 286 9 0 chr10 138125031 138125136 -7464152 + MER103 DNA DNA 11 116 -50 2491 113 48 20 chr10 138125566 138125920 -7463368 - THE1B LTR MaLR 0 364 1 1857 149 0 13 chr10 138126069 138126371 -7462917 - AluSx SINE Alu -14 298 1 221 205 0 0 chr10 138126392 138126431 -7462857 - L2 LINE L2 -17 3255 3217 2069 118 20 3 chr10 138128073 138128370 -7460918 - AluSx SINE Alu -8 304 3 460 86 0 0 chr10 138128382 138128452 -7460836 - Alu SINE Alu -5 305 236 25 31 0 0 chr10 138128744 138128776 -7460512 + AT_rich Low_complexity Low_complexity 1 32 0 2151 84 0 48 chr10 138128776 138129086 -7460202 - AluSx SINE Alu -17 295 1 13732 115 14 4 chr10 138129826 138131788 -7457500 + Tigger1 DNA MER2_type 2 1983 -435 2358 102 19 3 chr10 138132199 138132542 -7456746 + L1PA8A LINE L1 5787 6127 -4 2176 102 0 0 chr10 138135571 138135856 -7453432 + AluSx SINE Alu 1 285 -27 2340 133 28 19 chr10 138136363 138136724 -7452564 + THE1B LTR MaLR 1 364 0 180 241 76 51 chr10 138136802 138136881 -7452407 + L2 LINE L2 3123 3203 -110 439 322 126 35 chr10 138137611 138137841 -7451447 + MIR SINE MIR 12 262 0 877 333 43 48 chr10 138137979 138138421 -7450867 + L2 LINE L2 2825 3264 -8 1872 156 0 3 chr10 138138493 138138794 -7450494 - AluJb SINE Alu -12 300 1 207 225 50 75 chr10 138141388 138141468 -7447820 + MIR3 SINE MIR 90 167 -41 22 0 0 0 chr10 138141998 138142020 -7447268 + AT_rich Low_complexity Low_complexity 1 22 0 1992 119 20 3 chr10 138142020 138142322 -7446966 + AluSx SINE Alu 1 307 -5 28 0 0 0 chr10 138142821 138142849 -7446439 + AT_rich Low_complexity Low_complexity 1 28 0 10333 40 11 62 chr10 138143731 138145207 -7444081 + SVA Other Other 1 1402 0 3156 223 192 41 chr10 138145298 138146403 -7442885 + L1MC4a LINE L1 6443 7714 -94 413 276 130 51 chr10 138147360 138147715 -7441573 - L1MC4a LINE L1 -1881 5927 5545 819 274 178 13 chr10 138147808 138148191 -7441097 - L2 LINE L2 0 3313 2868 728 311 75 9 chr10 138148728 138149359 -7439929 - L1MC4a LINE L1 -1118 5028 4357 623 269 133 21 chr10 138149369 138149648 -7439640 - LTR33 LTR ERVL -7 514 205 300 320 0 0 chr10 138149802 138149877 -7439411 - L1MC4a LINE L1 -1922 4224 4150 1377 176 42 62 chr10 138149878 138150167 -7439121 - MLT1C LTR MaLR 0 467 185 2913 200 5 0 chr10 138150175 138150751 -7438537 - L1 LINE L1 -773 5442 4864 514 319 102 33 chr10 138150759 138151120 -7438168 - L1MEc LINE L1 -3192 3023 2638 22 0 0 0 chr10 138151133 138151155 -7438133 + AT_rich Low_complexity Low_complexity 1 22 0 699 272 69 71 chr10 138151161 138151444 -7437844 - L1MEc LINE L1 -3644 2571 2327 1938 91 42 14 chr10 138151444 138151731 -7437557 - AluY SINE Alu -16 295 1 699 272 69 71 chr10 138151731 138151897 -7437391 - L1MEc LINE L1 -3888 2327 2162 507 288 85 77 chr10 138152109 138152889 -7436399 - L1M4 LINE L1 -1451 4695 3902 2327 83 0 0 chr10 138152889 138153189 -7436099 - AluSx SINE Alu -12 300 1 507 288 85 77 chr10 138153189 138153466 -7435822 - L1M4 LINE L1 -2244 3902 3629 1522 154 4 8 chr10 138153469 138153716 -7435572 + AluJo SINE Alu 1 246 -66 496 189 39 79 chr10 138153886 138154013 -7435275 - MER103 DNA DNA -43 123 2 2148 105 0 0 chr10 138154096 138154403 -7434885 - AluSx SINE Alu 0 307 1 440 236 126 16 chr10 138154413 138154595 -7434693 + L1ME4a LINE L1 5682 5883 -238 1505 125 0 17 chr10 138154775 138155015 -7434273 - AluSx SINE Alu -15 297 62 218 351 53 35 chr10 138155263 138155434 -7433854 + L2 LINE L2 3087 3260 -12 509 255 59 80 chr10 138156185 138156424 -7432864 - MIR SINE MIR -17 245 12 744 292 10 5 chr10 138156516 138156725 -7432563 - MIR SINE MIR -21 241 32 318 167 0 0 chr10 138157083 138157143 -7432145 + (TG)n Simple_repeat Simple_repeat 2 61 0 1800 140 7 17 chr10 138158288 138158580 -7430708 - AluJb SINE Alu -23 289 1 213 296 102 0 chr10 138159949 138160057 -7429231 - L2 LINE L2 -775 2539 2421 2124 124 56 31 chr10 138160451 138160806 -7428482 - THE1B LTR MaLR 0 364 1 446 251 92 36 chr10 138160972 138161167 -7428121 - MER58A DNA MER1_type 0 224 19 239 152 0 63 chr10 138161611 138161690 -7427598 + CT-rich Low_complexity Low_complexity 3 76 0 227 229 0 16 chr10 138161914 138161975 -7427313 + (TAAA)n Simple_repeat Simple_repeat 1 60 0 250 348 43 9 chr10 138162131 138162246 -7427042 + MER5A DNA MER1_type 71 189 0 242 305 33 53 chr10 138162796 138162947 -7426341 - L2 LINE L2 -2 3270 3123 210 357 98 9 chr10 138162981 138163093 -7426195 + L2 LINE L2 3149 3270 -2 319 228 34 34 chr10 138163435 138163584 -7425704 - L1ME4a LINE L1 0 6121 5973 451 308 31 6 chr10 138163778 138163937 -7425351 - L1ME4a LINE L1 -443 5678 5516 1384 247 110 25 chr10 138163959 138164469 -7424819 - MLT1H1 LTR MaLR -2 553 1 503 301 10 65 chr10 138164648 138164847 -7424441 + MIR SINE MIR 59 246 -16 255 217 50 0 chr10 138165761 138165821 -7423467 + MIR SINE MIR 102 164 -98 195 290 282 15 chr10 138165962 138166093 -7423195 - MIR SINE MIR -22 186 21 236 333 87 8 chr10 138166413 138166539 -7422749 + MIR SINE MIR 92 227 -35 218 236 0 56 chr10 138166560 138166592 -7422696 + CT-rich Low_complexity Low_complexity 4 36 -35 2057 93 52 3 chr10 138166592 138166881 -7422407 - AluSc SINE Alu -6 303 1 218 236 0 56 chr10 138166881 138166920 -7422368 + CT-rich Low_complexity Low_complexity 36 71 0 5437 76 60 45 chr10 138167400 138168240 -7421048 + L1PB1 LINE L1 5299 6150 -1 284 94 19 0 chr10 138169269 138169322 -7419966 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 1407 158 36 0 chr10 138169344 138169566 -7419722 + MER46A DNA MER2_type 1 230 -6 183 232 0 0 chr10 138169608 138169664 -7419624 + (TG)n Simple_repeat Simple_repeat 2 57 0 238 198 28 132 chr10 138169730 138169836 -7419452 - MIR SINE MIR -7 255 161 350 278 11 0 chr10 138170134 138170224 -7419064 - MIR SINE MIR -84 124 34 237 196 157 29 chr10 138171077 138171179 -7418109 + L2 LINE L2 2940 3054 -218 292 282 64 36 chr10 138171236 138171346 -7417942 - L2 LINE L2 -27 3245 3133 655 236 198 19 chr10 138171763 138172026 -7417262 - LTR16A1 LTR ERVL -1 456 147 1866 152 0 10 chr10 138172544 138172846 -7416442 + AluSx SINE Alu 1 299 -13 347 286 85 38 chr10 138173664 138173816 -7415472 + MIR SINE MIR 16 172 -64 331 263 175 0 chr10 138173891 138174005 -7415283 - MER94 DNA DNA 0 134 1 245 370 43 7 chr10 138174517 138174655 -7414633 + MIR SINE MIR 89 231 -31 351 61 0 160 chr10 138174848 138174932 -7414356 - MLT1H LTR MaLR 0 579 488 229 243 100 14 chr10 138175364 138175434 -7413854 - MIR SINE MIR -69 193 118 304 316 76 19 chr10 138175442 138175600 -7413688 - MLT1H LTR MaLR 0 549 383 754 284 127 17 chr10 138176931 138177316 -7411972 + LTR16A LTR ERVL 1 450 0 255 333 35 9 chr10 138178300 138178414 -7410874 + L2 LINE L2 3166 3282 -31 1962 227 79 38 chr10 138178702 138179320 -7409968 + MLT1E2 LTR MaLR 1 624 -2 183 288 82 14 chr10 138179387 138179460 -7409828 + MIR SINE MIR 98 175 -87 275 254 60 51 chr10 138179472 138179660 -7409628 + MIR SINE MIR 38 225 -37 502 230 28 16 chr10 138180852 138181109 -7408179 + CT-rich Low_complexity Low_complexity 1 260 0 334 325 79 0 chr10 138181447 138181573 -7407715 - L2 LINE L2 -1 3271 3136 187 259 19 0 chr10 138182231 138182285 -7407003 + MIR SINE MIR 104 158 -104 1872 143 25 0 chr10 138184474 138184760 -7404528 - AluJb SINE Alu -19 293 1 15357 127 23 21 chr10 138184834 138187246 -7402042 + Tigger1 DNA MER2_type 2 2417 -1 314 211 21 42 chr10 138187254 138187349 -7401939 - L1MC5 LINE L1 -32 7929 7837 4316 151 73 12 chr10 138187399 138188222 -7401066 - L1MB2 LINE L1 -16 6155 5283 214 280 84 9 chr10 138188411 138188518 -7400770 - L2 LINE L2 -2 3270 3156 403 136 11 45 chr10 138188553 138188641 -7400647 - L1MB8 LINE L1 -1 6177 6093 282 97 0 48 chr10 138188653 138188715 -7400573 - L1MB4 LINE L1 -4 6179 6120 23 0 0 0 chr10 138189176 138189199 -7400089 + AT_rich Low_complexity Low_complexity 1 23 0 330 237 137 76 chr10 138189262 138189511 -7399777 - L1MC4a LINE L1 -1691 6117 5854 2443 109 62 22 chr10 138190395 138190830 -7398458 - MER1A DNA MER1_type 0 539 1 21 57 0 0 chr10 138191154 138191189 -7398099 + AT_rich Low_complexity Low_complexity 1 35 0 466 191 221 0 chr10 138192237 138192373 -7396915 - MER5B DNA MER1_type -8 170 5 574 219 159 7 chr10 138192422 138192573 -7396715 + MER5A DNA MER1_type 7 180 -9 247 235 0 0 chr10 138192668 138192719 -7396569 + MER34 LTR ERV1 25 75 -467 3106 122 69 10 chr10 138192823 138193315 -7395973 - MER4B LTR ERV1 0 610 90 396 230 76 65 chr10 138193475 138193692 -7395596 + MER34 LTR ERV1 368 537 -5 3060 177 153 46 chr10 138193726 138194472 -7394816 + LTR1B LTR ERV1 1 826 0 200 311 96 15 chr10 138194614 138194749 -7394539 + L2 LINE L2 2912 3057 -215 304 257 0 14 chr10 138194779 138194853 -7394435 + L2 LINE L2 3241 3313 0 15148 208 53 21 chr10 138194927 138195037 -7394251 + Zaphod DNA AcHobo 3 108 -3923 2433 59 3 0 chr10 138195037 138195324 -7393964 + AluY SINE Alu 3 290 -21 2364 98 0 0 chr10 138195334 138195631 -7393657 + AluSg SINE Alu 1 297 -13 15148 208 53 21 chr10 138195631 138199256 -7390032 + Zaphod DNA AcHobo 116 3867 -164 1808 198 65 47 chr10 138199888 138200382 -7388906 - MLT1D LTR MaLR -2 503 1 491 283 60 11 chr10 138200471 138200655 -7388633 - MIR SINE MIR -16 246 54 194 232 43 29 chr10 138200704 138200773 -7388515 - L2 LINE L2 -12 3301 3232 191 289 108 80 chr10 138200894 138201035 -7388253 + L2 LINE L2 2641 2777 -537 1508 189 61 17 chr10 138201035 138201331 -7387957 + AluJo SINE Alu 1 309 -3 191 289 108 80 chr10 138201331 138201514 -7387774 + L2 LINE L2 2777 2974 -340 268 300 90 0 chr10 138201679 138201779 -7387509 + L2 LINE L2 3190 3298 -15 180 200 0 0 chr10 138201782 138201822 -7387466 + (TGGA)n Simple_repeat Simple_repeat 1 40 0 1847 165 0 7 chr10 138203211 138203520 -7385768 + AluJb SINE Alu 1 307 -5 25 31 0 0 chr10 138203536 138203568 -7385720 + AT_rich Low_complexity Low_complexity 1 32 0 558 279 93 0 chr10 138203577 138203760 -7385528 - L1ME4a LINE L1 -81 6040 5841 307 277 252 7 chr10 138205113 138205601 -7383687 + L2 LINE L2 2449 3054 -259 2242 150 16 13 chr10 138205656 138206029 -7383259 - THE1C LTR MaLR -1 374 1 1729 120 153 7 chr10 138206067 138206367 -7382921 + MSTA LTR MaLR 1 344 -84 772 249 87 22 chr10 138206509 138206738 -7382550 + MSTA LTR MaLR 185 428 0 181 298 167 0 chr10 138206738 138206852 -7382436 + L2 LINE L2 3181 3313 0 536 236 18 36 chr10 138207521 138207686 -7381602 + MLT1K LTR MaLR 124 285 -303 477 231 8 26 chr10 138208273 138208390 -7380898 + LTR16C LTR ERVL 373 487 -4 193 207 69 0 chr10 138209130 138209188 -7380100 - MIR SINE MIR -65 143 82 1129 195 49 137 chr10 138210014 138210424 -7378864 - MLT1A2 LTR MaLR 0 374 1 1077 223 96 59 chr10 138210609 138211138 -7378150 + MLT1H LTR MaLR 1 549 0 254 239 43 34 chr10 138211146 138211263 -7378025 - L1ME4a LINE L1 -44 6077 5960 1041 201 91 97 chr10 138211288 138211671 -7377617 + MLT1B LTR MaLR 10 390 0 1093 201 125 36 chr10 138212132 138212737 -7376551 + MER39 LTR ERV1 6 542 0 542 294 5 16 chr10 138212933 138213120 -7376168 - L1ME4a LINE L1 -331 5790 5606 282 128 117 43 chr10 138213145 138213239 -7376049 - L1M4 LINE L1 -1668 4478 4378 1525 159 54 58 chr10 138213305 138213600 -7375688 + AluJb SINE Alu 11 304 -8 2358 131 102 3 chr10 138213612 138213995 -7375293 + MSTA LTR MaLR 2 422 -6 647 197 8 0 chr10 138213997 138214119 -7375169 + FLAM_A SINE Alu 2 124 -9 1844 126 43 20 chr10 138214294 138214596 -7374692 + AluSq SINE Alu 1 309 -4 1555 241 63 14 chr10 138214676 138215141 -7374147 - L1MC4a LINE L1 -591 5575 5392 2180 162 29 12 chr10 138215141 138215380 -7373908 - MSTB LTR MaLR 0 426 175 2123 97 0 4 chr10 138215380 138215699 -7373589 - AluSx SINE Alu 0 322 5 2180 162 29 12 chr10 138215699 138215877 -7373411 - MSTB LTR MaLR -251 175 1 1555 241 63 14 chr10 138215877 138215997 -7373291 - L1MC4a LINE L1 -774 5392 5279 727 303 52 58 chr10 138216027 138216493 -7372795 - L1M4 LINE L1 -1877 4269 3807 195 218 45 168 chr10 138216832 138216900 -7372388 + MIR SINE MIR 70 145 -117 1703 156 20 30 chr10 138216900 138217202 -7372086 - AluJb SINE Alu -13 299 1 195 218 45 168 chr10 138217202 138217353 -7371935 + MIR SINE MIR 145 262 0 180 135 0 0 chr10 138217616 138217653 -7371635 + (TA)n Simple_repeat Simple_repeat 2 38 0 323 290 126 41 chr10 138217826 138218048 -7371240 + MIR SINE MIR 20 261 -1 4055 218 31 10 chr10 138219264 138220082 -7369206 - MER21B LTR ERV1 -17 846 12 334 281 91 45 chr10 138220167 138220327 -7368961 + MIR SINE MIR 36 201 -61 1394 164 86 0 chr10 138220457 138220713 -7368575 + L1MB4 LINE L1 5892 6169 -11 639 305 94 53 chr10 138221355 138222199 -7367089 + L1M4 LINE L1 2839 3711 -2435 825 282 218 1 chr10 138222206 138222759 -7366529 + L2 LINE L2 2624 3312 -1 454 246 55 73 chr10 138222768 138222922 -7366366 + L1M4 LINE L1 3712 3862 -2284 1739 168 84 140 chr10 138222922 138223457 -7365831 + MLT1D LTR MaLR 1 505 0 454 246 55 73 chr10 138223457 138223522 -7365766 + L1M4 LINE L1 3862 3927 -2219 319 261 130 16 chr10 138223634 138223818 -7365470 + MIR SINE MIR 28 232 -30 3765 185 14 46 chr10 138224088 138224889 -7364399 - LTR39 LTR ERV1 0 783 9 21 0 0 0 chr10 138225908 138225929 -7363359 + AT_rich Low_complexity Low_complexity 1 21 0 194 179 0 26 chr10 138226593 138226632 -7362656 + MIR SINE MIR 109 146 -62 262 325 91 5 chr10 138227962 138228159 -7361129 - MIR SINE MIR -1 261 48 247 213 41 16 chr10 138228847 138228931 -7360357 + MIR SINE MIR 56 149 -59 284 0 28 0 chr10 138229369 138229405 -7359883 + (TTCA)n Simple_repeat Simple_repeat 1 37 0 1489 136 31 9 chr10 138230952 138231180 -7358108 + MER1A DNA MER1_type 27 259 -268 900 143 0 8 chr10 138231182 138231315 -7357973 + FLAM_C SINE Alu 3 134 -9 2284 103 0 0 chr10 138231318 138231608 -7357680 + AluSc SINE Alu 1 290 -19 2005 122 0 0 chr10 138231614 138231893 -7357395 + MER1A DNA MER1_type 251 529 0 2241 95 0 0 chr10 138232373 138232688 -7356600 - AluSx SINE Alu 0 315 1 472 340 14 7 chr10 138234434 138234578 -7354710 + L2 LINE L2 3128 3272 0 273 358 20 46 chr10 138234767 138234918 -7354370 - L2 LINE L2 -20 3252 3106 523 187 82 22 chr10 138235023 138235157 -7354131 + L1ME1 LINE L1 6020 6161 -5 697 247 76 36 chr10 138235178 138235401 -7353887 - MLT1G LTR MaLR -37 553 322 373 235 93 66 chr10 138235435 138235618 -7353670 - L2 LINE L2 -10 3303 3116 1779 89 52 120 chr10 138235630 138235954 -7353334 + AluSx SINE Alu 1 302 -10 1078 240 70 38 chr10 138236119 138236490 -7352798 + MLT1J1 LTR MaLR 1 383 -63 2740 170 28 8 chr10 138236654 138237164 -7352124 + MER41B LTR ERV1 100 482 -4 495 202 20 0 chr10 138237165 138237264 -7352024 + MER5A DNA MER1_type 6 106 -83 379 281 63 37 chr10 138237301 138237682 -7351606 - L1M4 LINE L1 -853 5293 4903 1061 270 86 50 chr10 138237785 138238523 -7350765 - L1ME4a LINE L1 -224 5897 5123 2206 131 7 0 chr10 138238846 138239152 -7350136 - AluSx SINE Alu 0 312 5 220 169 17 17 chr10 138239265 138239324 -7349964 + (TA)n Simple_repeat Simple_repeat 1 59 0 226 240 88 40 chr10 138239861 138239986 -7349302 + MIR3 SINE MIR 2 132 -76 279 0 0 0 chr10 138240014 138240045 -7349243 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 37722 34 0 1 chr10 138240045 138245379 -7343909 - L1PA3 LINE L1 -5 6150 692 2385 63 0 72 chr10 138245585 138245917 -7343371 + AluY SINE Alu 1 308 -3 2200 80 0 21 chr10 138246301 138246615 -7342673 - AluSg SINE Alu 0 308 1 276 158 0 0 chr10 138246624 138246681 -7342607 + (TA)n Simple_repeat Simple_repeat 2 58 0 869 267 128 36 chr10 138246709 138247203 -7342085 - L1ME4a LINE L1 -267 5854 5316 2879 205 29 44 chr10 138247374 138248246 -7341042 - L1MB2 LINE L1 0 6171 5356 2364 194 22 72 chr10 138248280 138248863 -7340425 - MLT2B3 LTR ERVL 0 554 1 3315 114 41 10 chr10 138248863 138249372 -7339916 - HERVL-B3 LTR ERVL 0 5654 5130 365 146 0 0 chr10 138249372 138249427 -7339861 - 5S rRNA rRNA -65 56 2 4520 101 25 0 chr10 138249428 138250032 -7339256 - HERVL-B3 LTR ERVL -517 5137 4519 898 153 0 84 chr10 138250032 138250222 -7339066 - MLT2A2 LTR ERVL -279 174 1 222 310 69 35 chr10 138251940 138252056 -7337232 + L2 LINE L2 3143 3262 -10 909 182 115 20 chr10 138252791 138253044 -7336244 + LTR16A LTR ERVL 174 450 0 185 288 153 42 chr10 138253254 138253469 -7335819 - L2 LINE L2 -6 3266 3028 381 307 33 13 chr10 138255655 138255805 -7333483 - MIR SINE MIR -31 231 79 641 284 101 52 chr10 138256958 138257432 -7331856 - MLT1F LTR MaLR 0 590 3 215 216 20 0 chr10 138258450 138258501 -7330787 - L2 LINE L2 -298 2974 2923 297 283 65 22 chr10 138259102 138259240 -7330048 + L2 LINE L2 3167 3310 -3 1937 148 21 3 chr10 138259607 138259897 -7329391 + AluSx SINE Alu 1 295 -17 437 303 72 5 chr10 138262038 138262222 -7327066 - MIR SINE MIR -25 237 44 1951 159 0 3 chr10 138262638 138262934 -7326354 - AluJb SINE Alu -17 295 1 2543 55 0 29 chr10 138262963 138263273 -7326015 - AluY SINE Alu -10 301 1 2358 218 18 25 chr10 138263536 138263779 -7325509 - L1MB1 LINE L1 -12 6156 5913 1841 168 0 23 chr10 138263779 138264083 -7325205 + AluJb SINE Alu 1 297 -15 2358 218 18 25 chr10 138264083 138264353 -7324935 - L1MB1 LINE L1 -255 5913 5647 313 258 129 8 chr10 138264373 138264505 -7324783 - MER5B DNA MER1_type 0 178 31 209 229 29 14 chr10 138265112 138265182 -7324106 + GA-rich Low_complexity Low_complexity 2 72 0 819 153 42 7 chr10 138265200 138265344 -7323944 + MLT1D LTR MaLR 309 457 -48 1060 219 113 30 chr10 138269336 138269604 -7319684 - MER113 DNA MER1_type? -2 519 218 234 0 0 0 chr10 138269604 138269630 -7319658 + (TTGG)n Simple_repeat Simple_repeat 2 27 0 1060 219 113 30 chr10 138269630 138269690 -7319598 - MER113 DNA MER1_type? -303 218 164 1762 141 18 14 chr10 138270107 138270221 -7319067 + AluSx SINE Alu 23 135 -177 2253 101 3 13 chr10 138270221 138270527 -7318761 + AluY SINE Alu 1 303 -8 1762 141 18 14 chr10 138270527 138270717 -7318571 + AluSx SINE Alu 135 312 0 314 326 67 21 chr10 138270877 138271159 -7318129 + L1ME4a LINE L1 897 1191 -4928 525 122 61 0 chr10 138271312 138271394 -7317894 + L1MD2 LINE L1 6141 6227 -132 1783 204 142 68 chr10 138271394 138271975 -7317313 + MLT1E3 LTR MaLR 1 600 -24 2358 144 25 72 chr10 138271975 138272420 -7316868 + MSTC LTR MaLR 1 424 -4 1783 204 142 68 chr10 138272420 138272445 -7316843 + MLT1E3 LTR MaLR 600 622 -2 396 258 0 32 chr10 138272448 138272572 -7316716 + L1MD1 LINE L1 6109 6228 -14 436 256 91 75 chr10 138272584 138272806 -7316482 + L1ME4a LINE L1 2659 2876 -3253 1837 168 10 0 chr10 138272806 138273115 -7316173 + AluJb SINE Alu 1 312 0 436 256 91 75 chr10 138273115 138273356 -7315932 + L1ME4a LINE L1 2876 3129 -3000 335 337 17 0 chr10 138273773 138273954 -7315334 + L1ME4a LINE L1 3725 3908 -2221 784 149 22 15 chr10 138274111 138274245 -7315043 + L1MC2 LINE L1 6196 6330 -14 40612 68 11 4 chr10 138274304 138280409 -7308879 + L1PA5 LINE L1 5 6154 0 1439 165 111 25 chr10 138280472 138280751 -7308537 + AluJo SINE Alu 1 303 -9 311 273 41 110 chr10 138280753 138281215 -7308073 + L1ME4a LINE L1 4069 4498 -1631 385 307 105 45 chr10 138281437 138281922 -7307366 + L1ME4a LINE L1 5367 5880 -224 2095 108 20 7 chr10 138281922 138282217 -7307071 + AluSx SINE Alu 1 299 -13 2253 125 0 3 chr10 138283006 138283317 -7305971 - AluSx SINE Alu -2 310 1 315 286 23 23 chr10 138283966 138284099 -7305189 - LTR33 LTR ERVL -7 514 382 22 0 0 0 chr10 138284657 138284679 -7304609 + AT_rich Low_complexity Low_complexity 1 22 0 365 350 42 24 chr10 138284808 138285185 -7304103 + L1 LINE L1 2110 2493 -3653 459 373 53 18 chr10 138285221 138285658 -7303630 + L1 LINE L1 2565 3016 -3130 333 315 50 61 chr10 138285695 138286054 -7303234 + L1 LINE L1 3303 3657 -2489 373 287 120 0 chr10 138286434 138286584 -7302704 + MIR SINE MIR 87 254 -8 1445 190 31 37 chr10 138286676 138286888 -7302400 + MER33 DNA MER1_type 1 212 -2373 1847 166 0 3 chr10 138286888 138287184 -7302104 - AluJo SINE Alu -17 295 1 1445 190 31 37 chr10 138287184 138287297 -7301991 + MER33 DNA MER1_type 212 324 0 351 343 130 0 chr10 138287328 138287497 -7301791 - L3 LINE CR1 -126 1451 1261 708 243 144 20 chr10 138289347 138289639 -7299649 - LTR16A LTR ERVL -102 348 21 347 284 49 31 chr10 138289799 138289961 -7299327 + MIR SINE MIR 8 172 -90 2745 127 14 2 chr10 138290035 138290461 -7298827 - L1M1 LINE L1 -521 5782 5352 8723 142 29 11 chr10 138290467 138291196 -7298092 - L1MA3 LINE L1 0 7007 6293 1872 109 65 54 chr10 138291196 138291564 -7297724 + THE1C LTR MaLR 4 375 0 8723 142 29 11 chr10 138291564 138291836 -7297452 - L1MA3 LINE L1 -714 6293 6027 216 0 0 0 chr10 138291836 138291860 -7297428 + (TTG)n Simple_repeat Simple_repeat 2 25 0 8723 142 29 11 chr10 138291860 138293419 -7295869 - L1MA3 LINE L1 -980 6027 4392 2970 174 19 88 chr10 138294870 138295636 -7293652 - L1MA3 LINE L1 -2444 4404 3701 2411 81 0 32 chr10 138295636 138295771 -7293517 + AluSq SINE Alu 1 139 -174 2257 97 0 0 chr10 138295771 138296084 -7293204 + AluSc SINE Alu 2 314 0 2411 81 0 32 chr10 138296084 138296257 -7293031 + AluSq SINE Alu 139 300 -13 2970 174 19 88 chr10 138296257 138296344 -7292944 - L1MA3 LINE L1 -3147 3701 3610 6733 72 26 6 chr10 138296351 138297795 -7291493 - L1PA10 LINE L1 -1 6482 5015 18886 186 27 26 chr10 138297795 138300190 -7289098 - L1PA10 LINE L1 -1896 4565 2109 2111 129 10 0 chr10 138300190 138300493 -7288795 + AluSq SINE Alu 1 306 -7 18886 186 27 26 chr10 138300493 138302594 -7286694 - L1PA10 LINE L1 -4352 2109 10 12577 209 21 41 chr10 138302606 138304438 -7284850 - L1MA3 LINE L1 -3226 3622 1898 2264 125 0 0 chr10 138304438 138304741 -7284547 - AluSx SINE Alu -9 303 1 12577 209 21 41 chr10 138304741 138306603 -7282685 - L1MA3 LINE L1 -4950 1898 1 235 283 66 28 chr10 138306749 138306855 -7282433 - L1MC/D LINE L1 -1886 5922 5813 419 222 118 142 chr10 138307727 138308150 -7281138 + MLT1J LTR MaLR 99 511 0 338 327 38 6 chr10 138308522 138308681 -7280607 - MIR SINE MIR -11 251 88 747 226 19 24 chr10 138309246 138309454 -7279834 - L2 LINE L2 -9 3304 3098 473 288 119 0 chr10 138309458 138309635 -7279653 - MIR SINE MIR -15 247 50 734 268 90 113 chr10 138311243 138311765 -7277523 - MLT1J LTR MaLR 0 511 2 290 283 42 115 chr10 138312055 138312177 -7277111 + LTR33 LTR ERVL 1 106 -415 2341 94 0 16 chr10 138312177 138312495 -7276793 - AluSq SINE Alu 0 313 1 290 283 42 115 chr10 138312495 138312563 -7276725 + LTR33 LTR ERVL 106 177 -344 821 176 63 19 chr10 138312567 138312726 -7276562 + MER63A DNA MER1_type 1 166 -44 850 261 65 4 chr10 138312762 138313023 -7276265 + LTR33 LTR ERVL 198 474 -47 345 326 14 7 chr10 138313053 138313194 -7276094 - MIR SINE MIR -97 165 24 2189 114 0 31 chr10 138314992 138315309 -7273979 - AluSq SINE Alu -4 309 3 196 321 55 64 chr10 138315563 138315672 -7273616 - L2 LINE L2 -65 3207 3100 2223 106 3 0 chr10 138315831 138316124 -7273164 + AluSc SINE Alu 1 294 -15 663 151 171 20 chr10 138317434 138317586 -7271702 + MER5A DNA MER1_type 9 183 -6 252 0 0 0 chr10 138319533 138319561 -7269727 + (CA)n Simple_repeat Simple_repeat 2 29 0 487 257 25 40 chr10 138320514 138320689 -7268599 + L1ME LINE L1 5572 5743 -378 404 149 11 46 chr10 138320690 138320760 -7268528 - MER44D DNA MER2_type -1 604 538 323 266 13 0 chr10 138320760 138320839 -7268449 + Tigger5 DNA MER2_type 1 80 -2243 405 206 0 0 chr10 138320860 138320933 -7268355 + Tigger5 DNA MER2_type 2251 2323 0 918 149 120 19 chr10 138320957 138321165 -7268123 - MER44D DNA MER2_type -80 529 31 366 277 126 34 chr10 138322363 138322569 -7266719 + MLT1K LTR MaLR 168 392 -196 2120 119 21 0 chr10 138323836 138324122 -7265166 + AluSx SINE Alu 1 292 -20 740 122 40 7 chr10 138324124 138324272 -7265016 + GA-rich Low_complexity Low_complexity 4 156 0 1176 109 12 12 chr10 138324272 138324526 -7264762 + (GAAA)n Simple_repeat Simple_repeat 3 255 0 494 283 10 3 chr10 138324566 138324704 -7264584 + MIR SINE MIR 3 140 -68 2768 166 25 0 chr10 138326132 138326613 -7262675 + L1MB3 LINE L1 5655 6147 -36 334 271 29 43 chr10 138326793 138326933 -7262355 - MIR SINE MIR -10 252 115 244 235 136 0 chr10 138327037 138327118 -7262170 - L1MC/D LINE L1 -2091 5717 5626 190 213 48 135 chr10 138328684 138328761 -7260527 + L2 LINE L2 2199 2281 -1033 2316 90 3 0 chr10 138328761 138329050 -7260238 - AluSx SINE Alu -22 290 1 190 213 48 135 chr10 138329050 138329202 -7260086 + L2 LINE L2 2281 2408 -906 1816 140 103 31 chr10 138329213 138329563 -7259725 + THE1C LTR MaLR 1 375 0 2266 94 127 57 chr10 138329726 138329941 -7259347 + L1PA14 LINE L1 5730 5929 -232 2342 81 0 3 chr10 138329941 138330236 -7259052 + AluY SINE Alu 1 294 -17 2266 94 127 57 chr10 138330236 138330423 -7258865 + L1PA14 LINE L1 5929 6160 -1 200 265 20 0 chr10 138330936 138330985 -7258303 + L2 LINE L2 3188 3237 -35 263 220 53 106 chr10 138331003 138331135 -7258153 + MER115 DNA AcHobo 11 135 -558 654 219 7 14 chr10 138331273 138331419 -7257869 + MER115 DNA AcHobo 538 682 -11 2577 40 3 3 chr10 138331554 138331850 -7257438 + AluY SINE Alu 1 296 -15 226 191 11 90 chr10 138333271 138333360 -7255928 + L1MC5 LINE L1 7831 7912 -49 1499 161 243 50 chr10 138335391 138335807 -7253481 + LTR48 LTR ERV1 1 496 -291 1041 172 29 15 chr10 138335826 138336030 -7253258 + LTR48B LTR ERV1 438 644 0 460 168 126 76 chr10 138336234 138336353 -7252935 + FLAM_A SINE Alu 11 135 -7 252 165 175 21 chr10 138336353 138336450 -7252838 - Charlie7 DNA MER1_type -47 2565 2454 975 284 24 15 chr10 138336479 138336814 -7252474 - Charlie7 DNA MER1_type -255 2357 2020 2035 182 80 44 chr10 138337223 138337427 -7251861 - Charlie7 DNA MER1_type -614 1998 1803 2560 65 0 3 chr10 138337427 138337733 -7251555 + AluSq SINE Alu 1 305 -8 2035 182 80 44 chr10 138337733 138337993 -7251295 - Charlie7 DNA MER1_type -809 1803 1508 2600 170 36 11 chr10 138337993 138338439 -7250849 + MSTB2 LTR MaLR 1 457 0 2035 182 80 44 chr10 138338439 138338523 -7250765 - Charlie7 DNA MER1_type -1104 1508 1429 627 272 60 67 chr10 138338596 138338783 -7250505 + MLT1I LTR MaLR 76 252 -157 456 164 48 10 chr10 138338790 138338894 -7250394 + MER53 DNA DNA 82 189 0 241 254 16 16 chr10 138338895 138338958 -7250330 + MLT1I LTR MaLR 341 403 -6 444 207 129 0 chr10 138338971 138339087 -7250201 - Charlie7 DNA MER1_type -2438 174 44 308 325 117 25 chr10 138339103 138339266 -7250022 + MER5A DNA MER1_type 12 189 0 414 297 95 34 chr10 138339307 138339455 -7249833 + MIR3 SINE MIR 42 198 -10 180 174 109 22 chr10 138340344 138340390 -7248898 - L2 LINE L2 -2 3270 3221 21 36 0 0 chr10 138341311 138341339 -7247949 + AT_rich Low_complexity Low_complexity 1 28 0 13538 29 5 1 chr10 138341339 138343622 -7245666 - L1PA3 LINE L1 -3 6152 3866 6056 38 1 0 chr10 138343622 138344352 -7244936 + L1PA3 LINE L1 3126 3856 -2290 333 293 65 51 chr10 138344431 138344458 -7244830 - L1ME4a LINE L1 -197 5924 5899 2284 78 0 14 chr10 138344458 138344754 -7244534 - AluY SINE Alu -19 292 1 333 293 65 51 chr10 138344754 138344941 -7244347 - L1ME4a LINE L1 -222 5899 5707 2151 98 7 0 chr10 138345085 138345372 -7243916 - AluSx SINE Alu -23 289 1 220 215 43 65 chr10 138345716 138345809 -7243479 + MER5A DNA MER1_type 34 124 -65 2282 99 0 3 chr10 138347287 138347590 -7241698 + AluSx SINE Alu 1 302 -10 266 333 74 30 chr10 138348786 138349017 -7240271 + L1ME LINE L1 5586 5826 -295 467 267 87 7 chr10 138349026 138349176 -7240112 - MIR SINE MIR -37 225 64 792 163 125 0 chr10 138349594 138349754 -7239534 - MER104 DNA MER2_type 0 180 1 1667 137 174 10 chr10 138351091 138351390 -7237898 + MER7A DNA MER2_type 1 346 0 216 224 86 0 chr10 138351508 138351566 -7237722 - MER5C DNA MER1_type -217 107 45 237 345 97 9 chr10 138351702 138351815 -7237473 - L2 LINE L2 -54 3218 3096 241 276 79 48 chr10 138353823 138353959 -7235329 - MIR SINE MIR -66 142 1 2111 102 34 17 chr10 138354674 138354967 -7234321 + AluSx SINE Alu 1 298 -14 247 286 0 13 chr10 138354999 138355076 -7234212 + MER103 DNA DNA 2 77 -89 744 225 0 0 chr10 138355286 138355415 -7233873 - FLAM_A SINE Alu -4 129 1 546 138 12 0 chr10 138356309 138356389 -7232899 + AluSg/x SINE Alu 208 288 -21 1667 179 3 17 chr10 138357620 138357921 -7231367 + AluJo SINE Alu 1 297 -15 248 268 73 24 chr10 138358083 138358165 -7231123 - L2 LINE L2 -190 3082 2997 639 307 76 4 chr10 138358537 138358775 -7230513 - MIR SINE MIR 0 262 8 380 278 117 19 chr10 138358781 138358943 -7230345 - MER5B DNA MER1_type 0 178 1 248 256 150 15 chr10 138359040 138359173 -7230115 - L2 LINE L2 -833 2481 2331 1146 173 195 4 chr10 138361039 138361311 -7227977 + MER33 DNA MER1_type 1 324 0 575 310 266 13 chr10 138363412 138363799 -7225489 + L2 LINE L2 2826 3310 -3 298 261 92 15 chr10 138364118 138364248 -7225040 + MIR SINE MIR 34 173 -89 679 224 159 19 chr10 138365485 138365699 -7223589 + MIR SINE MIR 19 262 0 189 263 149 21 chr10 138366574 138366660 -7222628 + L2 LINE L2 3167 3308 -5 1336 94 0 3 chr10 138368076 138368299 -7220989 - AluSp SINE Alu -12 301 2 1940 160 3 3 chr10 138368441 138368753 -7220535 - AluJb SINE Alu 0 312 1 23 0 0 0 chr10 138369629 138369652 -7219636 + AT_rich Low_complexity Low_complexity 1 23 0 1608 154 139 8 chr10 138370976 138371243 -7218045 - AluJo SINE Alu 0 302 1 2088 155 115 3 chr10 138371552 138371925 -7217363 - MER44D DNA MER2_type 0 605 136 1693 202 31 14 chr10 138371925 138372281 -7217007 - MLT1B LTR MaLR 0 390 29 475 277 109 76 chr10 138372939 138373332 -7215956 + L1 LINE L1 4993 5398 -748 1443 154 0 37 chr10 138373339 138373585 -7215703 - AluSg/x SINE Alu -10 302 66 455 299 79 29 chr10 138374998 138375239 -7214049 - L1ME3A LINE L1 -273 5897 5645 733 125 0 0 chr10 138375462 138375558 -7213730 - AluSg/x SINE Alu -12 297 202 494 167 36 0 chr10 138375564 138375648 -7213640 - L1M4 LINE L1 -1196 4950 4864 1741 147 21 7 chr10 138375743 138376029 -7213259 + AluSx SINE Alu 15 304 -8 227 98 0 24 chr10 138376029 138376070 -7213218 + L1M4 LINE L1 4996 5035 -1111 350 236 84 79 chr10 138376555 138376618 -7212670 + HAL1b LINE L1 587 648 -700 2222 123 0 0 chr10 138376618 138376926 -7212362 + AluSx SINE Alu 1 308 -4 350 236 84 79 chr10 138376926 138377040 -7212248 + HAL1b LINE L1 648 765 -583 287 129 140 194 chr10 138377143 138377329 -7211959 + HAL1b LINE L1 933 1108 -240 1213 153 94 47 chr10 138377686 138377970 -7211318 - AluJo SINE Alu 0 312 29 2122 219 40 49 chr10 138378388 138379004 -7210284 - MER77 LTR ERV1 -2 603 60 246 291 102 0 chr10 138379181 138379287 -7210001 - MIR SINE MIR -66 142 30 273 243 0 27 chr10 138379726 138379800 -7209488 + (TATG)n Simple_repeat Simple_repeat 3 74 0 2064 135 3 3 chr10 138380693 138381005 -7208283 + AluSx SINE Alu 1 312 0 606 254 24 24 chr10 138381667 138381836 -7207452 - L1ME1 LINE L1 -21 6145 5977 4880 242 69 16 chr10 138381839 138383554 -7205734 - L1MCb LINE L1 -2073 4868 2880 1889 151 6 22 chr10 138383554 138383871 -7205417 - AluJo SINE Alu 0 312 1 4880 242 69 16 chr10 138383871 138384577 -7204711 - L1MCb LINE L1 -4061 2880 2213 1732 258 43 27 chr10 138384683 138385657 -7203631 - L1MCb LINE L1 -4892 1531 820 319 284 116 21 chr10 138385883 138386177 -7203111 - L1MCb LINE L1 -5854 568 86 870 195 0 7 chr10 138386251 138386405 -7202883 + FRAM SINE Alu 12 164 -12 2648 62 0 0 chr10 138386460 138386768 -7202520 - AluY SINE Alu -3 308 1 1183 195 4 1 chr10 138387510 138387809 -7201479 - MER2 DNA MER2_type 0 345 6 324 288 6 75 chr10 138389053 138389213 -7200075 + MIR SINE MIR 86 234 -28 378 229 153 42 chr10 138389728 138389846 -7199442 + L2 LINE L2 3183 3313 0 2108 128 7 3 chr10 138391466 138391763 -7197525 - AluJb SINE Alu -14 298 1 1806 133 13 42 chr10 138393890 138394198 -7195090 - AluJb SINE Alu -13 299 1 396 243 59 29 chr10 138394969 138395105 -7194183 - MIR3 SINE MIR -39 169 30 1700 153 41 37 chr10 138396622 138396917 -7192371 + AluJb SINE Alu 1 296 -16 208 240 40 0 chr10 138396938 138396988 -7192300 - L2 LINE L2 -98 3215 3164 1806 141 26 56 chr10 138397496 138397802 -7191486 + AluJb SINE Alu 1 297 -15 271 280 8 48 chr10 138397834 138397959 -7191329 - MER94 DNA DNA -14 120 1 2356 98 3 0 chr10 138398164 138398460 -7190828 - AluSx SINE Alu -15 297 1 209 186 31 72 chr10 138400822 138400919 -7188369 + G-rich Low_complexity Low_complexity 6 98 0 330 190 14 28 chr10 138401199 138401341 -7187947 + (CAGAGA)n Simple_repeat Simple_repeat 2 141 0 671 210 28 21 chr10 138403603 138403746 -7185542 + AluJo SINE Alu 2 145 -167 1764 164 0 63 chr10 138403747 138404064 -7185224 + AluJb SINE Alu 1 297 -15 379 266 96 5 chr10 138404064 138404318 -7184970 + MLT1J2 LTR MaLR 131 450 0 655 278 130 51 chr10 138405458 138405533 -7183755 - L2 LINE L2 -6 3307 3239 3255 62 76 0 chr10 138405533 138405952 -7183336 - MLT2A2 LTR ERVL -2 451 1 655 278 130 51 chr10 138405952 138406471 -7182817 - L2 LINE L2 -74 3239 2660 1362 203 100 26 chr10 138406847 138407187 -7182101 + MLT1A1 LTR MaLR 1 365 0 2021 152 0 13 chr10 138407697 138408006 -7181282 - AluJb SINE Alu -7 305 1 1852 220 55 53 chr10 138408681 138409182 -7180106 + MLT2B3 LTR ERVL 4 508 -46 225 83 0 0 chr10 138409182 138409218 -7180070 + (TCTG)n Simple_repeat Simple_repeat 2 37 0 1852 220 55 53 chr10 138409218 138409266 -7180022 + MLT2B3 LTR ERVL 508 554 0 351 298 58 8 chr10 138410504 138410625 -7178663 + MIR SINE MIR 66 192 -70 615 85 0 0 chr10 138410666 138410748 -7178540 + MER57A LTR ERV1 8 89 -314 1687 121 22 0 chr10 138410903 138411175 -7178113 + MER57A LTR ERV1 126 403 0 2119 122 37 3 chr10 138411492 138411786 -7177502 - AluSg SINE Alu -6 304 1 263 268 10 31 chr10 138411874 138411971 -7177317 - MLT1J LTR MaLR -14 497 403 494 288 0 3 chr10 138412027 138412232 -7177056 - MLT1J LTR MaLR -200 311 59 2155 91 49 0 chr10 138413089 138413374 -7175914 - AluSq SINE Alu -14 299 1 469 311 24 24 chr10 138414270 138414437 -7174851 + MER5B DNA MER1_type 1 167 -11 403 263 68 8 chr10 138414732 138414850 -7174438 + MIR SINE MIR 59 183 -79 510 301 101 5 chr10 138416225 138416444 -7172844 + MIR SINE MIR 8 247 -15 412 188 198 21 chr10 138416562 138416713 -7172575 + MIR SINE MIR 23 192 -67 4014 186 48 48 chr10 138417039 138417337 -7171951 + L1MB7 LINE L1 4943 5240 -944 2118 77 96 0 chr10 138417337 138417609 -7171679 + AluSq SINE Alu 1 298 -15 2359 90 0 3 chr10 138417619 138417918 -7171370 + AluSx SINE Alu 1 298 -14 4014 186 48 48 chr10 138417918 138418762 -7170526 + L1MB7 LINE L1 5249 6095 -89 953 143 0 0 chr10 138418762 138418895 -7170393 + FLAM_C SINE Alu 1 133 0 4014 186 48 48 chr10 138418895 138418985 -7170303 + L1MB7 LINE L1 6095 6184 0 2175 107 9 22 chr10 138420338 138420655 -7168633 - AluSq SINE Alu 0 313 1 366 264 49 29 chr10 138420704 138420863 -7168425 + MIR SINE MIR 43 195 -62 275 321 46 9 chr10 138420933 138421042 -7168246 + MIR SINE MIR 34 146 -116 230 290 90 30 chr10 138421479 138421579 -7167709 - MIR SINE MIR -112 150 45 182 291 122 47 chr10 138423369 138423541 -7165747 + MIR3 SINE MIR 17 201 -7 495 296 0 68 chr10 138424130 138424306 -7164982 - MIR SINE MIR -86 176 13 238 274 9 80 chr10 138425074 138425187 -7164101 + MIR SINE MIR 112 216 -46 657 232 23 17 chr10 138426959 138427136 -7162152 + LTR28 LTR ERV1 1 178 -842 1541 173 32 28 chr10 138427207 138427361 -7161927 + MER61D LTR ERV1 217 374 -127 2299 100 6 28 chr10 138427361 138427680 -7161608 - AluSx SINE Alu 0 312 1 1541 173 32 28 chr10 138427680 138427809 -7161479 + MER61D LTR ERV1 374 501 0 245 195 26 52 chr10 138428199 138428276 -7161012 + MIR SINE MIR 174 248 -14 410 249 76 22 chr10 138429893 138430052 -7159236 + MIR SINE MIR 5 169 -62 1827 209 133 88 chr10 138430797 138431539 -7157749 + MER21B LTR ERV1 19 794 -69 259 304 63 78 chr10 138431607 138431798 -7157490 + L2 LINE L2 3076 3263 -9 433 296 92 31 chr10 138432235 138432318 -7156970 + MIR SINE MIR 48 124 -138 1010 174 39 29 chr10 138432318 138432525 -7156763 + MER3 DNA MER1_type 1 209 0 433 296 92 31 chr10 138432525 138432637 -7156651 + MIR SINE MIR 124 255 -7 478 226 120 0 chr10 138433307 138433440 -7155848 + MER58B DNA MER1_type 193 341 0 2102 144 0 3 chr10 138434623 138434936 -7154352 - AluSx SINE Alu 0 312 1 448 198 33 25 chr10 138435535 138435656 -7153632 + MIR SINE MIR 65 186 -76 25 0 0 0 chr10 138435702 138435727 -7153561 + AT_rich Low_complexity Low_complexity 1 25 0 2342 87 0 7 chr10 138435834 138436132 -7153156 + AluY SINE Alu 1 296 -15 45 19 0 0 chr10 138436469 138436521 -7152767 + AT_rich Low_complexity Low_complexity 1 52 0 649 196 14 27 chr10 138436706 138436854 -7152434 - FRAM SINE Alu -9 167 22 637 242 57 43 chr10 138437580 138437791 -7151497 + MIR SINE MIR 43 256 -6 2644 189 54 32 chr10 138437835 138438238 -7151050 - MER68 LTR ERV1 0 562 143 2166 60 8 0 chr10 138438238 138438504 -7150784 - AluY SINE Alu -24 287 20 2644 189 54 32 chr10 138438504 138438633 -7150655 - MER68 LTR ERV1 -419 143 18 2339 74 10 0 chr10 138438687 138438983 -7150305 + AluY SINE Alu 1 299 -12 907 279 118 32 chr10 138439699 138440140 -7149148 + L2 LINE L2 2313 2791 -523 287 274 19 33 chr10 138440125 138440245 -7149043 - L2 LINE L2 -353 2919 2803 * 410 291 209 40 chr10 138441196 138441570 -7147718 + L2 LINE L2 2874 3310 -3 1802 184 14 0 chr10 138442026 138442319 -7146969 + AluJo SINE Alu 1 297 -15 1647 170 21 7 chr10 138443013 138443301 -7145987 + AluJo SINE Alu 18 309 -3 442 314 211 17 chr10 138443341 138443939 -7145349 - L2 LINE L2 -665 2649 1936 1308 249 96 10 chr10 138443983 138444494 -7144794 - MLT1G1 LTR MaLR -7 588 1 250 333 76 0 chr10 138444505 138444610 -7144678 + MIR SINE MIR 116 228 -34 259 298 58 39 chr10 138444711 138444916 -7144372 + L2 LINE L2 1729 1937 -1377 22 70 0 0 chr10 138445825 138445868 -7143420 + AT_rich Low_complexity Low_complexity 1 43 0 831 143 15 15 chr10 138447512 138447645 -7141643 - FLAM_C SINE Alu 0 133 1 907 201 0 0 chr10 138447955 138448114 -7141174 + FAM SINE Alu 1 159 -16 1995 151 0 28 chr10 138448139 138448458 -7140830 + AluSx SINE Alu 1 310 -2 245 275 29 0 chr10 138449362 138449431 -7139857 + L2 LINE L2 3178 3248 -24 260 329 0 0 chr10 138449592 138449674 -7139614 - MIR SINE MIR -68 140 59 2118 106 0 27 chr10 138449827 138450152 -7139136 + AluSq SINE Alu 1 317 0 2571 48 0 3 chr10 138450157 138450452 -7138836 + AluY SINE Alu 1 294 -17 2468 84 3 0 chr10 138450605 138450914 -7138374 + AluY SINE Alu 1 310 -1 24 0 0 0 chr10 138451561 138451585 -7137703 + AT_rich Low_complexity Low_complexity 1 24 0 1612 142 11 11 chr10 138452457 138452724 -7136564 - AluJo SINE Alu -12 300 34 380 288 142 9 chr10 138452729 138452962 -7136326 + L2 LINE L2 2683 2946 -368 187 240 170 50 chr10 138453708 138453808 -7135480 - MIR SINE MIR -27 235 124 1562 261 45 19 chr10 138457003 138457531 -7131757 + L1MEc LINE L1 49 590 -5806 724 237 93 0 chr10 138457603 138457797 -7131491 + L1MEc LINE L1 716 927 -5469 2067 114 10 10 chr10 138458189 138458478 -7130810 - AluSq SINE Alu -24 289 1 182 308 135 10 chr10 138459894 138459998 -7129290 + L2 LINE L2 3156 3272 0 792 199 196 13 chr10 138460763 138461079 -7128209 - LTR37A LTR ERV1 0 426 53 1706 163 21 11 chr10 138461079 138461362 -7127926 + AluJb SINE Alu 1 286 -26 268 281 120 42 chr10 138461793 138461960 -7127328 + MIR SINE MIR 77 256 -6 187 243 43 29 chr10 138462792 138462862 -7126426 - MIR SINE MIR -70 192 122 463 200 0 12 chr10 138463185 138463270 -7126018 - AluJb SINE Alu -145 167 84 21 36 0 0 chr10 138463512 138463540 -7125748 + AT_rich Low_complexity Low_complexity 1 28 0 1329 150 0 14 chr10 138463594 138463807 -7125481 + MER6B DNA MER2_type 1 210 0 855 153 0 0 chr10 138463857 138463975 -7125313 - AluJb SINE Alu -194 118 1 1330 195 141 57 chr10 138464245 138464742 -7124546 + MLT1F1 LTR MaLR 19 559 -8 440 289 126 20 chr10 138465019 138465343 -7123945 - Tigger8 DNA MER2_type -165 501 97 428 136 74 0 chr10 138465967 138466048 -7123240 - L1MB4 LINE L1 -6 6174 6088 297 309 31 47 chr10 138466048 138466239 -7123049 - L1ME LINE L1 -489 5632 5445 278 231 121 54 chr10 138467266 138467461 -7121827 + MIR SINE MIR 4 202 -60 1768 134 4 4 chr10 138467635 138467889 -7121399 - AluSx SINE Alu -58 254 1 271 330 195 11 chr10 138468078 138468263 -7121025 + MIR SINE MIR 31 249 -13 289 301 128 25 chr10 138469373 138469569 -7119719 - L2 LINE L2 -1 3271 3056 267 245 167 10 chr10 138469863 138469965 -7119323 + MIR SINE MIR 47 164 -98 365 266 79 0 chr10 138471136 138471275 -7118013 + L1ME LINE L1 5566 5715 -406 925 126 0 15 chr10 138471359 138471494 -7117794 - FLAM_C SINE Alu 0 133 1 259 333 0 13 chr10 138471592 138471670 -7117618 + MIR SINE MIR 18 94 -114 602 225 216 14 chr10 138471743 138471961 -7117327 - MIR SINE MIR 0 262 1 1707 161 3 38 chr10 138472327 138472644 -7116644 + AluJo SINE Alu 1 307 0 1166 147 40 36 chr10 138473028 138473110 -7116178 + MER50 LTR ERV1 486 566 -168 2268 97 3 3 chr10 138473110 138473408 -7115880 - AluSc SINE Alu -11 298 1 1166 147 40 36 chr10 138473408 138473550 -7115738 + MER50 LTR ERV1 566 711 -23 1875 159 52 26 chr10 138473553 138473898 -7115390 + MER50-int LTR ERV1 4 357 -6848 536 246 68 42 chr10 138474217 138474250 -7115038 - MIR SINE MIR -14 248 217 2488 154 87 32 chr10 138474250 138474743 -7114545 - MLT2B1 LTR ERVL 0 520 1 536 246 68 42 chr10 138474743 138474945 -7114343 - MIR SINE MIR -45 217 7 238 263 128 23 chr10 138475152 138475195 -7114093 - L1ME4a LINE L1 -12 6109 6072 3098 143 62 10 chr10 138475195 138475776 -7113512 + L1MB3 LINE L1 5572 6182 -1 238 263 128 23 chr10 138475776 138475865 -7113423 - L1ME4a LINE L1 -49 6072 5963 340 197 16 0 chr10 138478972 138479033 -7110255 - Charlie3 DNA MER1_type -2648 62 1 239 250 17 0 chr10 138479403 138479463 -7109825 + MLT1K LTR MaLR 515 575 -13 3346 95 95 6 chr10 138479614 138480098 -7109190 - MER1A DNA MER1_type 0 527 1 181 154 289 0 chr10 138480498 138480550 -7108738 - MIR SINE MIR -61 147 81 605 318 37 0 chr10 138480867 138481081 -7108207 - MIR SINE MIR -21 241 20 265 303 0 0 chr10 138481098 138481174 -7108114 - MER94 DNA DNA 0 134 59 1014 157 46 93 chr10 138482049 138482265 -7107023 - AluJo SINE Alu -15 297 92 1439 107 16 0 chr10 138482365 138482552 -7106736 - AluSx SINE Alu -121 191 2 1094 155 91 0 chr10 138483491 138483678 -7105610 + MER34C LTR ERV1 1 204 -381 1154 158 0 0 chr10 138483678 138483849 -7105439 + AluJb SINE Alu 142 312 0 21 71 0 0 chr10 138485306 138485348 -7103940 + AT_rich Low_complexity Low_complexity 1 42 0 2376 91 7 7 chr10 138486842 138487151 -7102137 + AluSc SINE Alu 1 309 0 2486 66 0 7 chr10 138487347 138487648 -7101640 - AluY SINE Alu -12 299 1 238 108 27 0 chr10 138487774 138487811 -7101477 - tRNA-Phe-TTC tRNA tRNA -38 38 1 1666 166 3 35 chr10 138488562 138488852 -7100436 + AluJo SINE Alu 1 281 -31 2042 115 3 31 chr10 138489907 138490228 -7099060 - AluJo SINE Alu 0 312 1 222 116 0 0 chr10 138491048 138491091 -7098197 + (T)n Simple_repeat Simple_repeat 1 43 0 1243 214 20 10 chr10 138492781 138493076 -7096212 - AluY SINE Alu 0 301 4 2431 88 3 0 chr10 138494253 138494560 -7094728 - AluSp SINE Alu -5 308 1 5089 201 76 72 chr10 138496958 138497341 -7091947 + L1MC4 LINE L1 6412 6792 -1250 1973 150 17 0 chr10 138497341 138497628 -7091660 + AluJb SINE Alu 1 292 -20 5089 201 76 72 chr10 138497628 138498092 -7091196 + L1MC4 LINE L1 6792 7253 -789 3704 151 69 44 chr10 138498092 138498801 -7090487 + LTR8A LTR ERV1 1 727 0 5089 201 76 72 chr10 138498801 138499601 -7089687 + L1MC4 LINE L1 7253 8042 0 1801 166 3 7 chr10 138499804 138500093 -7089195 + AluSx SINE Alu 1 288 -24 278 271 0 0 chr10 138500205 138500264 -7089024 + MIR SINE MIR 93 151 -57 2239 199 121 32 chr10 138500533 138501070 -7088218 + MER34C LTR ERV1 1 585 0 2165 112 0 14 chr10 138501078 138501407 -7087881 - AluSg SINE Alu 0 310 1 2136 146 0 0 chr10 138501415 138501723 -7087565 - AluJo SINE Alu -4 308 1 1003 218 123 65 chr10 138501752 138502047 -7087241 + MER93b LTR ERV1 12 331 -42 1754 167 27 10 chr10 138502047 138502340 -7086948 - AluJb SINE Alu -11 301 4 1003 218 123 65 chr10 138502340 138502384 -7086904 + MER93b LTR ERV1 331 371 -2 24 0 0 0 chr10 138504040 138504064 -7085224 + AT_rich Low_complexity Low_complexity 1 24 0 1854 137 14 4 chr10 138504064 138504342 -7084946 - AluJb SINE Alu -31 281 1 206 280 0 67 chr10 138504837 138504912 -7084376 - L2 LINE L2 -2 3270 3201 21 36 0 0 chr10 138505264 138505292 -7083996 + AT_rich Low_complexity Low_complexity 1 28 0 791 256 207 28 chr10 138505653 138506121 -7083167 + MLT1H1 LTR MaLR 1 552 -3 2323 257 74 34 chr10 138507278 138507654 -7081634 + L2 LINE L2 2120 2480 -833 2337 194 57 26 chr10 138507654 138508144 -7081144 + MLT1D LTR MaLR 1 505 0 2323 257 74 34 chr10 138508144 138508841 -7080447 + L2 LINE L2 2480 3227 -86 209 284 86 0 chr10 138509608 138509689 -7079599 - L2 LINE L2 0 3272 3185 234 330 27 18 chr10 138509778 138509890 -7079398 - L2 LINE L2 -420 2894 2782 687 153 38 69 chr10 138510039 138510170 -7079118 - FLAM_A SINE Alu -4 129 3 1486 118 5 23 chr10 138510602 138510823 -7078465 - AluJo SINE Alu -11 301 85 21 36 0 0 chr10 138510868 138510896 -7078392 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr10 138511014 138511042 -7078246 + AT_rich Low_complexity Low_complexity 1 28 0 2116 128 3 0 chr10 138511177 138511466 -7077822 + AluSx SINE Alu 1 290 -22 471 320 27 36 chr10 138512157 138512376 -7076912 - MIR SINE MIR -6 256 40 429 100 0 0 chr10 138513018 138513078 -7076210 - U2 snRNA snRNA -128 60 1 821 142 8 16 chr10 138513189 138513316 -7075972 + FLAM_C SINE Alu 2 127 -16 781 125 71 0 chr10 138513860 138513972 -7075316 + FLAM_C SINE Alu 4 123 -10 25 51 0 0 chr10 138513976 138514015 -7075273 + AT_rich Low_complexity Low_complexity 1 39 0 435 339 165 25 chr10 138514190 138514906 -7074382 + L2 LINE L2 2041 2856 -458 189 0 0 0 chr10 138515620 138515641 -7073647 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 2524 53 0 0 chr10 138515643 138515942 -7073346 - AluY SINE Alu -12 299 1 30 89 0 0 chr10 138518532 138518611 -7070677 + GC_rich Low_complexity Low_complexity 1 79 0 217 229 0 0 chr10 138519061 138519109 -7070179 + (CTGGGG)n Simple_repeat Simple_repeat 5 52 0 1879 94 6 103 chr10 138520276 138520606 -7068682 + AluSc SINE Alu 1 298 -11 256 291 238 47 chr10 138520675 138521057 -7068231 - L2 LINE L2 -1 3271 2817 1664 164 0 59 chr10 138521291 138521463 -7067825 - AluJo SINE Alu -7 305 159 2285 101 3 0 chr10 138521463 138521761 -7067527 - AluSp SINE Alu -14 299 1 1664 164 0 59 chr10 138521761 138521912 -7067376 - AluJo SINE Alu -153 159 1 2134 112 7 0 chr10 138523019 138523351 -7065937 - AluSx SINE Alu 0 312 1 588 200 0 17 chr10 138523365 138523485 -7065803 - FLAM_A SINE Alu -1 141 24 559 271 213 61 chr10 138523582 138524240 -7065048 + L2 LINE L2 2366 2923 -349 1986 100 7 4 chr10 138524240 138524510 -7064778 + AluSx SINE Alu 1 271 -41 1421 55 0 0 chr10 138524510 138524673 -7064615 + L1PA3 LINE L1 5990 6152 -3 559 271 213 61 chr10 138524673 138524771 -7064517 + L2 LINE L2 2922 3223 -49 584 171 0 0 chr10 138525980 138526068 -7063220 + FLAM_A SINE Alu 31 118 -24 30 27 0 0 chr10 138526068 138526105 -7063183 + AT_rich Low_complexity Low_complexity 1 37 0 1143 153 12 46 chr10 138526239 138526480 -7062808 - AluSq SINE Alu -1 312 80 259 290 93 19 chr10 138526667 138526829 -7062459 + L1M4 LINE L1 3407 3580 -2566 821 185 269 17 chr10 138526838 138527076 -7062212 - AluSg SINE Alu -1 299 2 226 305 30 6 chr10 138527076 138527243 -7062045 - L1M4 LINE L1 -2387 3759 3589 2454 67 0 19 chr10 138527245 138527561 -7061727 + AluY SINE Alu 1 310 -1 657 136 168 16 chr10 138527571 138527696 -7061592 + FRAM SINE Alu 20 163 -13 308 261 112 31 chr10 138527731 138527892 -7061396 - L1M4 LINE L1 -2566 3580 3407 496 118 0 0 chr10 138528197 138528265 -7061023 + FRAM/FAM SINE Alu 20 87 -98 1858 142 0 0 chr10 138528635 138528902 -7060386 + AluSx SINE Alu 1 267 -45 231 36 0 0 chr10 138529003 138529031 -7060257 + (CA)n Simple_repeat Simple_repeat 1 28 0 416 200 0 0 chr10 138529031 138529106 -7060182 - MLT1E LTR MaLR -441 152 78 374 266 11 11 chr10 138529134 138529228 -7060060 - MLT1E LTR MaLR -560 94 1 * 376 135 14 40 chr10 138529228 138529301 -7059987 + MLT1F1 LTR MaLR 494 564 -3 254 98 0 59 chr10 138529429 138529480 -7059808 + L1MB4 LINE L1 6132 6179 -1 344 294 65 20 chr10 138529494 138529647 -7059641 - MIR SINE MIR -23 239 80 2340 100 0 0 chr10 138530059 138530369 -7058919 - AluSx SINE Alu -2 310 1 352 244 160 8 chr10 138531885 138532016 -7057272 - L1MEc LINE L1 -1498 4717 4567 1235 228 142 16 chr10 138532035 138532486 -7056802 - L1MC4 LINE L1 -1983 5993 5486 1550 236 117 38 chr10 138532489 138533197 -7056091 - L1MC4 LINE L1 -2665 3415 2652 270 299 65 0 chr10 138533216 138533323 -7055965 - L1MC4 LINE L1 -5906 164 51 1732 186 10 0 chr10 138533382 138533677 -7055611 - AluJb SINE Alu -14 298 1 544 237 84 90 chr10 138533693 138534042 -7055246 - L1MEc LINE L1 -2411 3804 3458 406 183 0 0 chr10 138534042 138534102 -7055186 + AluJ/FLAM SINE Alu 3 62 -250 1690 155 7 7 chr10 138534050 138534321 -7054967 + AluJb SINE Alu 11 281 -31 403 219 18 18 chr10 138534659 138534773 -7054515 + AluY SINE Alu 177 290 -21 2011 150 0 0 chr10 138534839 138535132 -7054156 - AluJb SINE Alu -19 293 1 841 217 0 0 chr10 138535271 138535432 -7053856 + AluJb SINE Alu 134 294 -18 326 236 154 28 chr10 138535436 138535559 -7053729 - L1MEc LINE L1 -2943 3272 3117 2268 91 0 14 chr10 138535559 138535856 -7053432 - AluSc SINE Alu -16 293 1 326 236 154 28 chr10 138535856 138535914 -7053374 - L1MEc LINE L1 -3098 3117 3068 1382 151 9 5 chr10 138535914 138536133 -7053155 + AluJb SINE Alu 85 304 -8 320 268 178 8 chr10 138536329 138536706 -7052582 - L1MEc LINE L1 -3417 2798 2358 807 211 60 60 chr10 138536728 138536960 -7052328 - AluJo SINE Alu -39 273 42 308 241 145 41 chr10 138537250 138537395 -7051893 - L1MEc LINE L1 -4214 2182 2023 1412 193 50 33 chr10 138537483 138538031 -7051257 - L1MD2 LINE L1 -10 6349 5752 398 250 208 0 chr10 138538197 138538341 -7050947 - L1ME3A LINE L1 -8 6162 5989 451 141 0 0 chr10 138538355 138538419 -7050869 - AluS SINE Alu -248 65 2 946 167 7 0 chr10 138538438 138538588 -7050700 - AluJb SINE Alu -26 286 136 1753 261 79 39 chr10 138538608 138538871 -7050417 - L1ME3A LINE L1 -183 5987 5736 2209 100 17 3 chr10 138538871 138539162 -7050126 - AluSq SINE Alu -18 295 1 1753 261 79 39 chr10 138539162 138539349 -7049939 - L1ME3A LINE L1 -434 5736 5558 4001 106 5 30 chr10 138539349 138539917 -7049371 - MER41A LTR ERV1 0 554 1 1753 261 79 39 chr10 138539917 138540293 -7048995 - L1ME3A LINE L1 -612 5558 5103 856 209 119 56 chr10 138540308 138540809 -7048479 - LTR48 LTR ERV1 -17 770 157 256 236 193 43 chr10 138540904 138540975 -7048313 - L1ME3A LINE L1 -1091 5055 4996 2143 118 136 0 chr10 138540975 138541307 -7047981 - MER51B LTR ERV1 0 377 1 256 236 193 43 chr10 138541307 138541375 -7047913 - L1ME3A LINE L1 -1150 4996 4895 1911 113 77 0 chr10 138541376 138541650 -7047638 - AluSx SINE Alu -17 295 1 1442 210 7 3 chr10 138541663 138541953 -7047335 - AluJo SINE Alu -21 291 1 11092 180 34 8 chr10 138542035 138545365 -7043923 - L1PB1 LINE L1 -1 6150 2735 333 0 0 0 chr10 138546041 138546078 -7043210 + (T)n Simple_repeat Simple_repeat 1 37 0 212 182 91 0 chr10 138546097 138546141 -7043147 - MIR SINE MIR -178 84 37 400 343 63 0 chr10 138546556 138546699 -7042589 + L2 LINE L2 3121 3272 0 893 254 109 6 chr10 138546835 138547182 -7042106 - MER69 DNA AcHobo -2 2524 2142 2201 203 69 114 chr10 138547642 138547732 -7041556 - L1ME3A LINE L1 -4 6166 6074 231 54 0 0 chr10 138547732 138547769 -7041519 + Alu SINE Alu 266 302 0 2201 203 69 114 chr10 138547769 138548102 -7041186 - L1ME3A LINE L1 -96 6074 5754 2164 103 3 7 chr10 138548102 138548402 -7040886 + AluSp SINE Alu 1 299 -14 2201 203 69 114 chr10 138548402 138548724 -7040564 - L1ME3A LINE L1 -416 5754 5419 593 156 89 0 chr10 138548729 138548864 -7040424 - MER69 DNA AcHobo -381 2145 1999 1526 263 137 55 chr10 138548872 138549848 -7039440 + L1MC4a LINE L1 5755 6831 -977 2222 98 7 0 chr10 138549848 138550133 -7039155 + AluSx SINE Alu 6 292 -20 1526 263 137 55 chr10 138550133 138550245 -7039043 + L1MC4a LINE L1 6831 6932 -876 * 1647 221 157 43 chr10 138550225 138550882 -7038406 + L1MC4 LINE L1 7308 8039 -3 435 187 11 11 chr10 138550893 138550984 -7038304 - MER69 DNA AcHobo -512 2014 1924 21 0 0 0 chr10 138551121 138551142 -7038146 + AT_rich Low_complexity Low_complexity 1 21 0 712 81 0 0 chr10 138551251 138551338 -7037950 - AluSg/x SINE Alu -16 294 208 3816 196 27 53 chr10 138551397 138552390 -7036898 - LTR5 LTR ERVK 0 969 3 1023 286 108 23 chr10 138552432 138553128 -7036160 + L1ME3A LINE L1 5170 5927 -243 687 133 10 0 chr10 138553612 138553710 -7035578 + L1PA10 LINE L1 6062 6160 -8 591 173 115 53 chr10 138553813 138554021 -7035267 - MER69 DNA AcHobo -30 2496 2276 875 213 193 10 chr10 138554023 138554114 -7035174 - MER69 DNA AcHobo -720 1806 1733 2309 112 0 13 chr10 138554114 138554426 -7034862 - AluSg SINE Alu 0 310 3 875 213 193 10 chr10 138554426 138554635 -7034653 - MER69 DNA AcHobo -793 1733 1451 1439 166 65 11 chr10 138554642 138554920 -7034368 - L1MB7 LINE L1 -1 6183 5891 3824 111 4 4 chr10 138555808 138556315 -7032973 + MER9 LTR ERVK 1 507 -4 38317 39 30 7 chr10 138556554 138561272 -7028016 + L1P LINE L1 1 4829 -1317 1391 145 0 0 chr10 138561445 138561638 -7027650 - AluJo SINE Alu -119 193 1 513 311 0 8 chr10 138561719 138561841 -7027447 + MER91A DNA MER1_type 2 122 -74 28 78 0 0 chr10 138562055 138562106 -7027182 + AT_rich Low_complexity Low_complexity 1 51 0 4411 137 4 11 chr10 138562598 138563362 -7025926 - L1P LINE L1 -2416 3730 2972 1999 115 3 14 chr10 138563756 138564087 -7025201 + AluSg SINE Alu 1 328 0 1753 112 7 34 chr10 138564166 138564460 -7024828 + AluSp SINE Alu 1 286 -27 268 90 60 15 chr10 138564492 138564559 -7024729 + (TA)n Simple_repeat Simple_repeat 2 71 0 817 66 19 0 chr10 138564959 138565065 -7024223 - AluSp SINE Alu -205 108 1 2180 115 0 10 chr10 138565065 138565370 -7023918 - AluSx SINE Alu -10 302 1 181 163 41 0 chr10 138565816 138565865 -7023423 + CT-rich Low_complexity Low_complexity 2 52 0 968 133 104 3 chr10 138566238 138566542 -7022746 + MSTA LTR MaLR 1 428 0 1110 48 0 14 chr10 138567356 138567502 -7021786 - AluY SINE Alu 0 311 168 2997 175 20 2 chr10 138568547 138569095 -7020193 - L1MA4 LINE L1 -306 5994 5437 1216 187 65 11 chr10 138569135 138569413 -7019875 - AluSg SINE Alu -5 295 3 204 163 0 0 chr10 138569576 138569619 -7019669 + CT-rich Low_complexity Low_complexity 3 45 0 338 138 35 0 chr10 138569727 138569785 -7019503 - MSTA LTR MaLR -368 60 1 4617 168 45 8 chr10 138571585 138572437 -7016851 - L1PA13 LINE L1 -4627 2160 1239 450 288 34 39 chr10 138572603 138572808 -7016480 + Charlie8 DNA MER1_type 8 211 -2206 1505 189 42 6 chr10 138573018 138573330 -7015958 + MER52A LTR ERV1 1433 1755 0 364 206 10 10 chr10 138574845 138574947 -7014341 + (CATATA)n Simple_repeat Simple_repeat 1 102 0 463 195 18 0 chr10 138575055 138575168 -7014120 + (TA)n Simple_repeat Simple_repeat 2 116 0 4928 206 27 20 chr10 138576506 138577717 -7011571 - L1P LINE L1 -1963 4183 2964 470 293 60 12 chr10 138577828 138577995 -7011293 + MIR SINE MIR 13 187 -75 390 259 71 18 chr10 138577989 138578101 -7011187 + L2 LINE L2 3194 3311 -2 * 248 188 101 0 chr10 138578092 138578161 -7011127 + MIR SINE MIR 187 262 0 * 2276 168 37 0 chr10 138579974 138580378 -7008910 + L1MA5A LINE L1 5603 6021 -276 2344 50 40 3 chr10 138580380 138580680 -7008608 - AluY SINE Alu 0 311 1 180 77 0 0 chr10 138581588 138581614 -7007674 + (TC)n Simple_repeat Simple_repeat 1 26 0 216 0 0 0 chr10 138581661 138581685 -7007603 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1422 195 7 34 chr10 138582904 138583202 -7006086 - AluJo SINE Alu -22 290 1 2443 199 94 4 chr10 138583280 138583851 -7005437 - L1MA7 LINE L1 -4 6287 5661 27 29 0 0 chr10 138584176 138584210 -7005078 + AT_rich Low_complexity Low_complexity 1 34 0 286 244 158 0 chr10 138584405 138584487 -7004801 - MER5A DNA MER1_type -93 96 2 197 286 129 18 chr10 138585009 138585180 -7004108 + MIR SINE MIR 2 191 -71 2236 114 78 0 chr10 138585186 138585546 -7003742 - LTR10B LTR ERV1 -2 503 116 1515 91 13 47 chr10 138585725 138585957 -7003331 + AluSc SINE Alu 49 272 -37 1709 170 32 0 chr10 138587060 138587337 -7001951 + AluJb SINE Alu 1 286 -26 2592 73 50 6 chr10 138587374 138587732 -7001556 + L1PA11 LINE L1 5801 6174 0 2083 130 7 10 chr10 138587893 138588194 -7001094 - AluSx SINE Alu -12 300 1 200 298 0 18 chr10 138588379 138588436 -7000852 - L2 LINE L2 -13 3259 3204 369 67 0 0 chr10 138588444 138588489 -7000799 + LTR10B LTR ERV1 1 45 -460 1914 150 0 0 chr10 138588614 138588894 -7000394 - AluSx SINE Alu -32 280 1 259 230 14 14 chr10 138588894 138588968 -7000320 - L1MEc LINE L1 -4756 1640 1567 21 0 0 0 chr10 138588968 138588989 -7000299 + AT_rich Low_complexity Low_complexity 1 21 0 1808 132 60 20 chr10 138589002 138589351 -6999937 - L1MA5A LINE L1 -5 6292 5930 899 159 41 0 chr10 138589351 138589496 -6999792 - THE1C LTR MaLR 0 375 225 737 119 0 9 chr10 138589496 138589605 -6999683 - AluSq/x SINE Alu -199 113 6 1727 118 30 7 chr10 138589611 138589907 -6999381 - L1MA5A LINE L1 -692 5605 5303 334 206 0 0 chr10 138589906 138589969 -6999319 + L1 LINE L1 4489 4551 -1595 * 1974 131 0 59 chr10 138590187 138590508 -6998780 + AluSx SINE Alu 1 302 -10 1852 124 21 36 chr10 138591561 138591615 -6997673 + L1 LINE L1 4540 4593 -1553 2264 75 0 34 chr10 138591615 138591910 -6997378 - AluY SINE Alu -26 285 1 1852 124 21 36 chr10 138591910 138592186 -6997102 + L1 LINE L1 4593 4865 -1281 1748 189 0 10 chr10 138592186 138592482 -6996806 - AluJb SINE Alu -17 295 3 555 16 0 0 chr10 138592773 138592837 -6996451 + (TG)n Simple_repeat Simple_repeat 2 65 0 309 253 13 0 chr10 138593159 138593238 -6996050 - L1MB8 LINE L1 0 6178 6099 2321 247 73 48 chr10 138593295 138594079 -6995209 + MER69 DNA AcHobo 565 1367 -1159 7623 14 3 0 chr10 138594381 138595719 -6993569 - L1PA2 LINE L1 0 6155 4788 1142 184 3 52 chr10 138595871 138596184 -6993104 + L1 LINE L1 4847 5122 -1024 1288 215 9 0 chr10 138596184 138596417 -6992871 + AluJo SINE Alu 60 294 -18 1133 137 11 0 chr10 138596417 138596607 -6992681 + L1 LINE L1 5110 5301 -845 699 264 156 24 chr10 138596610 138597289 -6991999 - L1MEc LINE L1 -4826 1389 808 638 195 55 0 chr10 138597282 138597446 -6991842 - L1MC3 LINE L1 0 7785 7613 * 2180 82 11 7 chr10 138597455 138597734 -6991554 - AluSx SINE Alu -15 297 18 5304 47 5 3 chr10 138597734 138598372 -6990916 + L1PA5 LINE L1 5515 6153 -1 2130 144 0 0 chr10 138598653 138598959 -6990329 - AluSx SINE Alu -6 306 1 578 276 176 6 chr10 138599060 138599373 -6989915 - L1ME4a LINE L1 -295 5826 5439 1777 96 28 16 chr10 138599373 138599651 -6989637 + AluSp SINE Alu 31 311 0 578 276 176 6 chr10 138599651 138599721 -6989567 - L1ME4a LINE L1 -682 5439 5382 410 301 18 0 chr10 138600003 138600116 -6989172 + MIR SINE MIR 20 134 -128 284 187 55 66 chr10 138601501 138601592 -6987696 - L1ME LINE L1 -301 5820 5731 565 240 73 21 chr10 138601701 138601893 -6987395 + MIR SINE MIR 17 218 -44 346 273 14 43 chr10 138601925 138602064 -6987224 + L1MC5 LINE L1 7773 7907 -54 1100 165 0 0 chr10 138602064 138602234 -6987054 - FRAM SINE Alu -5 171 2 596 214 0 88 chr10 138602546 138602728 -6986560 - FRAM SINE Alu 0 166 1 8595 72 126 19 chr10 138604086 138605338 -6983950 - SVA Other Other 0 1386 1 2276 82 0 20 chr10 138606100 138606394 -6982894 - AluY SINE Alu -23 288 1 701 232 47 55 chr10 138606431 138606685 -6982603 + MIR SINE MIR 2 253 -9 360 0 0 0 chr10 138607361 138607401 -6981887 + (CA)n Simple_repeat Simple_repeat 2 41 0 291 296 83 28 chr10 138609093 138609309 -6979979 - L1MC4a LINE L1 -1914 5894 5667 5796 93 0 0 chr10 138609318 138610211 -6979077 - L1PA14 LINE L1 -2 6159 5209 16590 138 119 18 chr10 138610211 138611092 -6978196 - L1PA12 LINE L1 -3964 3620 2829 2164 131 0 0 chr10 138611092 138611390 -6977898 - AluSx SINE Alu -14 298 1 16590 138 119 18 chr10 138611390 138613811 -6975477 - L1PA12 LINE L1 -4755 2829 5 327 277 121 51 chr10 138613817 138614149 -6975139 - L1MC4a LINE L1 -484 5680 5326 343 307 109 37 chr10 138615145 138615494 -6973794 + L2 LINE L2 2807 3180 -133 2027 138 38 0 chr10 138615693 138615983 -6973305 + AluJb SINE Alu 1 301 -11 886 166 69 0 chr10 138616112 138616287 -6973001 - L1MD1 LINE L1 -1 6241 6055 258 207 17 0 chr10 138616344 138616402 -6972886 + (TATATG)n Simple_repeat Simple_repeat 1 59 0 939 299 132 28 chr10 138617787 138618552 -6970736 - L2 LINE L2 0 3313 2462 816 303 54 11 chr10 138618556 138618898 -6970390 - MLT1I LTR MaLR 0 409 70 239 115 279 0 chr10 138618944 138619005 -6970283 - L2 LINE L2 -859 2455 2378 477 241 159 30 chr10 138620086 138620290 -6968998 - MLT1G1 LTR MaLR 0 595 314 310 211 218 23 chr10 138620407 138620540 -6968748 - MLT1G1 LTR MaLR -312 237 79 180 0 0 0 chr10 138622180 138622200 -6967088 + (CA)n Simple_repeat Simple_repeat 2 21 0 661 132 18 18 chr10 138624947 138625061 -6964227 + FRAM SINE Alu 46 159 -17 2832 82 0 14 chr10 138625377 138625744 -6963544 - THE1B LTR MaLR -2 362 1 252 0 0 0 chr10 138625903 138625931 -6963357 + (TG)n Simple_repeat Simple_repeat 2 29 0 907 159 67 20 chr10 138628093 138628288 -6961000 - MER20 DNA MER1_type 0 219 16 245 272 0 58 chr10 138628796 138628899 -6960389 + (GGGTG)n Simple_repeat Simple_repeat 5 101 0 251 254 132 35 chr10 138628940 138629054 -6960234 + L2 LINE L2 3189 3313 0 222 297 0 0 chr10 138629216 138629280 -6960008 - MIR SINE MIR -19 243 180 200 250 65 22 chr10 138632762 138632854 -6956434 - L2 LINE L2 -17 3296 3201 1871 80 0 0 chr10 138633856 138634081 -6955207 - AluY SINE Alu -11 300 76 206 238 79 0 chr10 138634110 138634173 -6955115 + L2 LINE L2 3203 3270 -2 567 213 85 6 chr10 138634334 138634498 -6954790 + MIR SINE MIR 83 259 -3 331 336 90 10 chr10 138634754 138635294 -6953994 + L1ME LINE L1 4465 5056 -1090 755 263 138 19 chr10 138635608 138635920 -6953368 + L1ME LINE L1 5455 5803 -318 2233 110 0 3 chr10 138636687 138636986 -6952302 + AluSg SINE Alu 1 298 -12 575 245 90 43 chr10 138637307 138637540 -6951748 - L1MC4 LINE L1 0 8042 7799 289 280 35 57 chr10 138637703 138637941 -6951347 - L1MC4 LINE L1 -393 7649 7317 681 136 0 0 chr10 138637941 138638044 -6951244 + AluJb SINE Alu 5 107 -205 942 269 56 54 chr10 138638075 138638319 -6950969 - L1MC4 LINE L1 -547 7495 7253 2103 147 0 0 chr10 138638319 138638631 -6950657 - AluSx SINE Alu 0 312 1 942 269 56 54 chr10 138638631 138638923 -6950365 - L1MC4 LINE L1 -789 7253 6960 1847 156 102 20 chr10 138639007 138639398 -6949890 - L1MB7 LINE L1 -16 6168 5746 1939 101 13 38 chr10 138639955 138640271 -6949017 - AluSx SINE Alu -4 308 1 2380 96 0 0 chr10 138641241 138641534 -6947754 + AluSx SINE Alu 1 293 -19 262 325 12 0 chr10 138642294 138642377 -6946911 + (TG)n Simple_repeat Simple_repeat 1 84 0 312 255 106 62 chr10 138645675 138645836 -6943452 - L1M4 LINE L1 -3016 3130 2963 233 240 52 110 chr10 138645858 138646012 -6943276 + MER5A DNA MER1_type 44 188 -1 2313 108 0 0 chr10 138646281 138646578 -6942710 + AluSg SINE Alu 1 297 -13 216 0 0 0 chr10 138648976 138649000 -6940288 + (T)n Simple_repeat Simple_repeat 1 24 0 808 162 107 14 chr10 138652194 138652410 -6936878 - Charlie5 DNA MER1_type 0 2624 2389 1606 211 85 20 chr10 138652977 138653379 -6935909 + MER63B DNA MER1_type 6 433 -3 2332 134 103 0 chr10 138653625 138654013 -6935275 + MSTA LTR MaLR 1 428 0 280 222 188 0 chr10 138655180 138655297 -6933991 + MIR SINE MIR 80 218 -44 2478 75 0 7 chr10 138655371 138655676 -6933612 + AluSx SINE Alu 1 303 -9 313 276 79 8 chr10 138656353 138656480 -6932808 + MIR SINE MIR 121 256 -6 401 276 55 0 chr10 138656815 138656942 -6932346 - MER94 DNA DNA 0 134 1 408 226 32 0 chr10 138657856 138657949 -6931339 + HAL1b LINE L1 733 828 -520 504 321 114 3 chr10 138658376 138658675 -6930613 + L1MEd LINE L1 476 807 -5312 27 62 0 0 chr10 138659042 138659090 -6930198 + AT_rich Low_complexity Low_complexity 1 48 0 11066 176 170 48 chr10 138659675 138662623 -6926665 + L1PA11 LINE L1 1075 4383 -1763 5818 75 86 3 chr10 138662743 138664022 -6925266 + L1PA11 LINE L1 4787 6174 0 355 266 184 30 chr10 138664022 138664289 -6924999 + L1ME LINE L1 5341 5648 -2160 331 258 0 11 chr10 138664521 138664610 -6924678 + L1MC5 LINE L1 7830 7917 -44 631 246 200 0 chr10 138667404 138667579 -6921709 - MER63A DNA MER1_type 0 210 1 562 259 294 26 chr10 138667645 138667958 -6921330 + L1MDa LINE L1 28 424 -6116 1346 194 72 119 chr10 138668058 138668493 -6920795 + L1MDa LINE L1 1794 2248 -4292 880 188 125 5 chr10 138668493 138668685 -6920603 + MER20 DNA MER1_type 1 215 -4 1346 194 72 119 chr10 138668685 138669377 -6919911 + L1MDa LINE L1 2248 2980 -3560 292 251 150 24 chr10 138669508 138669675 -6919613 + L1ME LINE L1 5586 5773 -348 274 235 133 10 chr10 138670077 138670175 -6919113 - MER94 DNA DNA 0 134 25 494 226 194 0 chr10 138670247 138670402 -6918886 - MIR SINE MIR -26 236 52 1100 241 188 20 chr10 138671177 138671571 -6917717 - L1ME1 LINE L1 -5 6161 5702 2375 67 40 0 chr10 138673237 138673535 -6915753 - AluY SINE Alu -1 310 1 187 329 73 0 chr10 138675453 138675535 -6913753 + L2 LINE L2 3179 3266 -6 260 345 43 7 chr10 138676717 138676856 -6912432 + MIR SINE MIR 88 231 -31 23 0 0 0 chr10 138678395 138678418 -6910870 + AT_rich Low_complexity Low_complexity 1 23 0 867 132 16 0 chr10 138678441 138678570 -6910718 + AluSq/x SINE Alu 3 133 -179 264 274 49 10 chr10 138679396 138679498 -6909790 + MIR3 SINE MIR 62 167 -41 2257 116 0 0 chr10 138680808 138681111 -6908177 + AluSc SINE Alu 1 303 -6 5018 90 14 1 chr10 138681892 138682591 -6906697 + L1PA13 LINE L1 5456 6163 0 414 0 0 0 chr10 138684322 138684368 -6904920 + (GCTG)n Simple_repeat Simple_repeat 1 46 0 185 265 36 72 chr10 138685465 138685548 -6903740 + L3 LINE CR1 586 665 -912 258 239 0 28 chr10 138685652 138685723 -6903565 + CT-rich Low_complexity Low_complexity 3 71 0 1083 117 0 0 chr10 138685744 138685924 -6903364 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 432 160 0 0 chr10 138685924 138686024 -6903264 + (CAGC)n Simple_repeat Simple_repeat 3 102 0 398 282 173 35 chr10 138686050 138686305 -6902983 - L2 LINE L2 -13 3300 3011 362 269 72 55 chr10 138686299 138686470 -6902818 - MIR SINE MIR -65 143 14 * 224 283 0 0 chr10 138686974 138687027 -6902261 + GA-rich Low_complexity Low_complexity 2 54 0 2692 116 46 14 chr10 138687248 138687663 -6901625 + MSTA LTR MaLR 1 428 0 2194 94 0 3 chr10 138688042 138688340 -6900948 - AluSq SINE Alu -16 297 1 234 282 137 0 chr10 138689017 138689134 -6900154 + MIR SINE MIR 106 238 -24 365 296 112 6 chr10 138689820 138689989 -6899299 - MIR SINE MIR -74 188 2 304 336 66 7 chr10 138691446 138691583 -6897705 + MLT1K LTR MaLR 117 261 -327 409 214 118 11 chr10 138694833 138694955 -6894333 - MIR SINE MIR -5 203 70 2478 164 63 38 chr10 138694970 138695446 -6893842 + MLT1D LTR MaLR 18 505 0 192 306 153 27 chr10 138697504 138697687 -6891601 + MIR SINE MIR 9 214 -48 257 323 97 21 chr10 138699082 138699175 -6890113 - MIR3 SINE MIR -31 177 78 374 296 166 20 chr10 138702873 138703072 -6886216 + L3 LINE CR1 1218 1445 -132 288 307 9 26 chr10 138703158 138703272 -6886016 + (ATGGTG)n Simple_repeat Simple_repeat 2 113 0 * 536 308 6 16 chr10 138703241 138703423 -6885865 + (TGG)n Simple_repeat Simple_repeat 1 180 0 332 295 134 24 chr10 138705891 138706227 -6883061 + MLT1J1 LTR MaLR 74 446 0 1904 112 40 10 chr10 138706625 138706921 -6882367 - AluSx SINE Alu -7 305 1 1601 112 105 0 chr10 138706927 138707185 -6882103 - L1PA15 LINE L1 -2 6163 5879 24 53 0 0 chr10 138707231 138707269 -6882019 + AT_rich Low_complexity Low_complexity 1 38 0 653 244 122 61 chr10 138708897 138709225 -6880063 - L2 LINE L2 0 3313 2966 1612 112 54 2 chr10 138709442 138709470 -6879818 - L1P1 LINE L1 -623 5532 5507 3788 127 40 2 chr10 138709470 138710045 -6879243 - L1PA16 LINE L1 -9 6157 5561 1612 112 54 2 chr10 138710045 138710457 -6878831 - L1P1 LINE L1 -648 5507 5072 * 4338 182 14 7 chr10 138710456 138711306 -6877982 + L1 LINE L1 4160 5015 -1131 767 151 89 14 chr10 138712537 138712683 -6876605 + MER5A DNA MER1_type 1 157 -32 1804 204 16 41 chr10 138712683 138713119 -6876169 - L1MB5 LINE L1 0 6174 5750 194 275 0 0 chr10 138713120 138713160 -6876128 + MER5A DNA MER1_type 149 188 -1 316 296 61 10 chr10 138715157 138715255 -6874033 + MIR SINE MIR 92 194 -68 2221 90 6 6 chr10 138715897 138716208 -6873080 - AluSx SINE Alu -1 311 1 249 328 102 0 chr10 138716769 138716897 -6872391 - MIR SINE MIR -109 153 13 273 248 147 51 chr10 138718357 138718514 -6870774 + MIR SINE MIR 21 192 -70 265 215 32 32 chr10 138719027 138719185 -6870103 + (TCTA)n Simple_repeat Simple_repeat 3 160 0 * 401 232 24 0 chr10 138719150 138719318 -6869970 + (TCCA)n Simple_repeat Simple_repeat 2 173 0 647 147 37 0 chr10 138719326 138719435 -6869853 - L2 LINE L2 0 3313 3201 1821 115 87 3 chr10 138719933 138720220 -6869068 + AluSx SINE Alu 1 311 -1 420 20 0 0 chr10 138720220 138720269 -6869019 + (TA)n Simple_repeat Simple_repeat 2 50 0 2011 105 11 0 chr10 138720315 138720601 -6868687 + AluSx SINE Alu 1 289 -23 1836 151 0 38 chr10 138721981 138722300 -6866988 + AluSx SINE Alu 1 307 -5 276 384 13 13 chr10 138723133 138723292 -6865996 + L2 LINE L2 2700 2858 -456 877 121 0 36 chr10 138723520 138723660 -6865628 - FLAM_C SINE Alu -8 135 1 387 336 30 0 chr10 138723677 138723808 -6865480 + L2 LINE L2 3162 3296 -17 258 143 0 0 chr10 138725493 138725542 -6863746 + (TGGA)n Simple_repeat Simple_repeat 2 50 0 201 350 98 8 chr10 138725543 138725666 -6863622 - MIR3 SINE MIR -52 156 23 303 396 37 6 chr10 138725958 138726122 -6863166 - L3 LINE CR1 -13 1564 1396 2606 127 21 30 chr10 138728726 138728825 -6860463 + MSTC LTR MaLR 1 99 -329 2454 65 0 0 chr10 138728825 138729132 -6860156 + AluY SINE Alu 1 307 -4 2606 127 21 30 chr10 138729132 138729464 -6859824 + MSTC LTR MaLR 99 428 0 369 93 0 0 chr10 138732925 138732979 -6856309 + (TCCC)n Simple_repeat Simple_repeat 4 57 0 287 351 37 8 chr10 138733664 138733798 -6855490 + L2 LINE L2 3175 3312 -1 2102 89 0 43 chr10 138733993 138734322 -6854966 + AluSc SINE Alu 1 309 0 422 364 80 4 chr10 138736965 138737204 -6852084 - MIR SINE MIR -4 258 2 2269 129 0 0 chr10 138737740 138738050 -6851238 + AluSx SINE Alu 1 310 -2 335 298 53 30 chr10 138739094 138739225 -6850063 + MER5B DNA MER1_type 1 134 -44 2640 59 0 0 chr10 138740047 138740353 -6848935 - AluSc SINE Alu 0 309 4 368 302 6 31 chr10 138740592 138740751 -6848537 + (CATA)n Simple_repeat Simple_repeat 3 157 0 203 254 36 0 chr10 138741286 138741341 -6847947 + MER5B DNA MER1_type 21 77 -101 21 57 0 0 chr10 138742584 138742619 -6846669 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr10 138742870 138742892 -6846396 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr10 138743153 138743181 -6846107 + AT_rich Low_complexity Low_complexity 1 28 0 2774 70 59 28 chr10 138745549 138745937 -6843351 + L1PA8A LINE L1 5725 6124 -7 26 0 0 0 chr10 138745937 138745963 -6843325 + AT_rich Low_complexity Low_complexity 1 26 0 252 273 31 86 chr10 138746297 138746425 -6842863 - L2 LINE L2 0 3272 3152 270 267 144 50 chr10 138746670 138746952 -6842336 - L2 LINE L2 -292 3021 2767 2270 120 3 0 chr10 138746952 138747260 -6842028 + AluSx SINE Alu 3 311 -1 419 0 20 0 chr10 138747260 138747311 -6841977 + (TA)n Simple_repeat Simple_repeat 2 53 0 270 267 144 50 chr10 138747311 138747422 -6841866 - L2 LINE L2 -545 2768 2592 243 299 52 0 chr10 138747801 138747898 -6841390 + L3 LINE CR1 760 861 -716 2178 117 3 0 chr10 138748046 138748344 -6840944 - AluSq SINE Alu -6 307 9 2001 142 9 0 chr10 138752193 138752511 -6836777 - L1PB3 LINE L1 -6 6148 5828 26 30 0 0 chr10 138752610 138752643 -6836645 + AT_rich Low_complexity Low_complexity 1 33 0 466 233 150 8 chr10 138752797 138752930 -6836358 + MIR SINE MIR 28 179 -83 2366 192 93 18 chr10 138753746 138754345 -6834943 - LTR48B LTR ERV1 0 644 1 375 149 34 34 chr10 138754463 138754638 -6834650 + (TATAA)n Simple_repeat Simple_repeat 2 176 0 586 75 74 47 chr10 138754675 138755022 -6834266 + (TA)n Simple_repeat Simple_repeat 1 356 0 204 175 0 0 chr10 138755067 138755130 -6834158 + (TATAA)n Simple_repeat Simple_repeat 5 67 0 2223 107 7 0 chr10 138756052 138756352 -6832936 + AluSx SINE Alu 1 302 -10 2184 125 3 13 chr10 138758183 138758495 -6830793 + AluSx SINE Alu 1 309 -3 795 219 31 20 chr10 138758576 138758772 -6830516 - L1MB7 LINE L1 0 6184 5987 2289 116 0 3 chr10 138758806 138759116 -6830172 - AluSc SINE Alu 0 309 1 226 300 50 0 chr10 138759120 138759200 -6830088 - MIR SINE MIR -61 201 118 1629 217 38 57 chr10 138759225 138759695 -6829593 + MLT1C LTR MaLR 7 467 0 192 253 221 0 chr10 138761028 138761123 -6828165 - L2 LINE L2 -19 3253 3138 208 313 95 66 chr10 138761357 138761568 -6827720 - L2 LINE L2 -213 3059 2843 249 321 75 22 chr10 138761599 138761733 -6827555 + MIR3 SINE MIR 8 148 -60 254 295 21 0 chr10 138762088 138762183 -6827105 + (TG)n Simple_repeat Simple_repeat 1 97 0 204 248 23 0 chr10 138762195 138762328 -6826960 + (TG)n Simple_repeat Simple_repeat 1 136 0 372 311 11 11 chr10 138762346 138762526 -6826762 + (TG)n Simple_repeat Simple_repeat 1 180 0 267 31 0 0 chr10 138764676 138764708 -6824580 + (T)n Simple_repeat Simple_repeat 1 32 0 1553 200 34 50 chr10 138765009 138765389 -6823899 + MLT1A2 LTR MaLR 1 374 0 446 264 126 35 chr10 138765389 138765550 -6823738 + MLT1K LTR MaLR 370 546 -42 2311 90 3 0 chr10 138765554 138765843 -6823445 - AluSc SINE Alu -15 294 5 258 211 0 0 chr10 138766290 138766342 -6822946 - MIR SINE MIR -81 127 76 450 279 102 42 chr10 138766435 138766836 -6822452 + L2 LINE L2 91 515 -2799 649 300 163 12 chr10 138767045 138767686 -6821602 + L2 LINE L2 2575 3313 0 415 285 142 36 chr10 138770410 138770933 -6818355 - L1M4 LINE L1 -845 5301 4724 4202 205 21 36 chr10 138770953 138771940 -6817348 - L1MB7 LINE L1 -19 6165 5206 2155 127 0 3 chr10 138771940 138772240 -6817048 - AluSx SINE Alu -3 309 11 4202 205 21 36 chr10 138772240 138772586 -6816702 - L1MB7 LINE L1 -978 5206 4857 315 310 65 36 chr10 138772605 138773098 -6816190 - L1MB7 LINE L1 -1443 4703 4197 361 267 64 111 chr10 138775467 138775639 -6813649 - MIR3 SINE MIR -8 200 37 3715 101 2 8 chr10 138775729 138776243 -6813045 - MER9 LTR ERVK 0 511 1 365 290 8 0 chr10 138776404 138776648 -6812640 + (TG)n Simple_repeat Simple_repeat 1 246 0 268 104 0 62 chr10 138776648 138776696 -6812592 + MER4-int LTR ERV1 1112 1156 -5442 472 262 15 0 chr10 138776743 138777095 -6812193 + (TG)n Simple_repeat Simple_repeat 1 357 0 238 278 28 14 chr10 138778192 138778264 -6811024 - MIR SINE MIR -174 88 16 556 189 0 0 chr10 138778801 138778891 -6810397 - 5S rRNA rRNA -31 90 1 477 313 122 5 chr10 138778891 138779105 -6810183 + MIR SINE MIR 19 257 -5 2926 129 9 11 chr10 138779705 138780154 -6809134 + MER83 LTR ERV1 1 448 0 305 317 42 0 chr10 138780897 138781017 -6808271 + L2 LINE L2 2953 3077 -195 2260 154 35 31 chr10 138782747 138783295 -6805993 + MLT2A2 LTR ERVL 1 553 -1 209 314 52 67 chr10 138783609 138783803 -6805485 + L2 LINE L2 2197 2387 -927 298 241 48 0 chr10 138784397 138784480 -6804808 + L2 LINE L2 3186 3272 0 349 267 142 62 chr10 138784686 138785382 -6803906 - L1MB7 LINE L1 -2266 3880 3129 356 239 69 111 chr10 138785691 138786080 -6803208 - L1MB7 LINE L1 -3644 2502 2130 598 305 63 81 chr10 138786868 138787646 -6801642 - L1MEd LINE L1 -5298 821 58 224 262 107 39 chr10 138787897 138788000 -6801288 + L2 LINE L2 3163 3272 0 2662 81 2 78 chr10 138789558 138789966 -6799322 + MER51B LTR ERV1 1 377 0 231 231 0 0 chr10 138790363 138790402 -6798886 + MLT1K LTR MaLR 204 242 -346 2387 66 7 3 chr10 138792248 138792552 -6796736 + AluY SINE Alu 1 305 -6 21 36 0 0 chr10 138792616 138792644 -6796644 + AT_rich Low_complexity Low_complexity 1 28 0 354 237 156 7 chr10 138793415 138793550 -6795738 + L1MA8 LINE L1 6112 6266 -25 736 290 81 27 chr10 138793892 138794393 -6794895 + L2 LINE L2 2714 3250 -63 567 290 147 27 chr10 138794435 138794659 -6794629 - MIR SINE MIR -2 260 10 203 269 103 51 chr10 138794685 138794763 -6794525 - L2 LINE L2 -10 3262 3181 2173 179 53 19 chr10 138796051 138796464 -6792824 + MSTA LTR MaLR 2 428 0 207 240 140 0 chr10 138797039 138797089 -6792199 + L2 LINE L2 3255 3311 -2 1818 132 36 4 chr10 138798396 138798677 -6790611 - AluSg SINE Alu -20 290 1 475 312 74 32 chr10 138798686 138798875 -6790413 - MIR SINE MIR -53 209 13 2023 95 51 7 chr10 138799708 138800003 -6789285 - AluSc SINE Alu -1 308 1 473 212 271 30 chr10 138800349 138800552 -6788736 - MIR SINE MIR -7 255 4 376 264 70 23 chr10 138801051 138801180 -6788108 - MIR SINE MIR -71 191 57 423 318 94 10 chr10 138801545 138801737 -6787551 + MIR SINE MIR 55 262 0 561 356 25 0 chr10 138801747 138801986 -6787302 + L2 LINE L2 2543 2787 -527 2101 108 3 10 chr10 138801992 138802298 -6786990 + AluSx SINE Alu 1 304 -8 390 327 87 39 chr10 138802399 138802708 -6786580 + L2 LINE L2 2948 3271 -1 24 0 0 0 chr10 138802806 138802830 -6786458 + AT_rich Low_complexity Low_complexity 1 24 0 192 40 0 0 chr10 138804093 138804118 -6785170 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 7146 45 6 1 chr10 138805623 138806487 -6782801 + L1PA7 LINE L1 5285 6152 -2 928 195 85 0 chr10 138806600 138806800 -6782488 - MER20 DNA MER1_type -2 217 1 316 163 0 142 chr10 138807107 138807229 -6782059 - L1MC4 LINE L1 0 8038 7888 954 58 72 7 chr10 138807229 138807367 -6781921 - AluSc SINE Alu -2 307 161 429 293 20 7 chr10 138807445 138807592 -6781696 - L1MC4 LINE L1 -131 7911 7763 407 228 44 22 chr10 138807732 138807868 -6781420 - L1MB8 LINE L1 0 6178 6040 2419 44 0 13 chr10 138807978 138808276 -6781012 - AluY SINE Alu -17 294 1 221 336 16 8 chr10 138810878 138811006 -6778282 + GA-rich Low_complexity Low_complexity 1 129 0 402 257 130 36 chr10 138811012 138811226 -6778062 + L1MCa LINE L1 2205 3560 -2866 186 43 0 0 chr10 138811234 138811257 -6778031 + (CA)n Simple_repeat Simple_repeat 1 23 0 503 299 106 18 chr10 138811522 138811739 -6777549 - MIR SINE MIR -1 261 26 216 0 0 0 chr10 138812596 138812620 -6776668 + (T)n Simple_repeat Simple_repeat 1 24 0 2251 112 0 3 chr10 138812952 138813265 -6776023 + AluSx SINE Alu 1 312 0 204 190 207 0 chr10 138813821 138813879 -6775409 - L2 LINE L2 -1 3271 3202 431 282 174 19 chr10 138814275 138814488 -6774800 - MIR SINE MIR -3 259 14 2076 130 0 0 chr10 138815260 138815559 -6773729 - AluSx SINE Alu -13 299 1 225 293 40 13 chr10 138815758 138815833 -6773455 - L2 LINE L2 -7 3265 3189 3559 121 31 2 chr10 138817064 138817576 -6771712 + MER1A DNA MER1_type 1 527 0 200 309 24 24 chr10 138817804 138817888 -6771400 - L2 LINE L2 0 3313 3230 327 300 50 36 chr10 138821035 138821175 -6768113 - MIR SINE MIR -51 211 70 194 329 158 12 chr10 138822677 138822759 -6766529 - L2 LINE L2 -31 3241 3148 454 178 49 0 chr10 138822948 138823111 -6766177 + (TCCA)n Simple_repeat Simple_repeat 3 173 0 434 352 91 30 chr10 138823141 138823581 -6765707 - L2 LINE L2 0 3272 2806 638 240 97 23 chr10 138823719 138823936 -6765352 - MIR SINE MIR -14 248 16 1876 134 7 19 chr10 138824386 138824693 -6764595 - AluSx SINE Alu -9 303 1 180 256 205 51 chr10 138824696 138824813 -6764475 - L2 LINE L2 0 3313 3179 313 287 146 57 chr10 138825004 138825177 -6764111 - L2 LINE L2 -384 2930 2774 2105 112 26 0 chr10 138825177 138825481 -6763807 - AluSx SINE Alu 0 312 1 313 287 146 57 chr10 138825481 138825836 -6763452 - L2 LINE L2 -540 2774 2355 768 236 47 98 chr10 138825881 138825968 -6763320 + MIR SINE MIR 1 91 -171 2165 121 129 5 chr10 138825968 138826347 -6762941 - MSTA LTR MaLR -2 426 1 768 236 47 98 chr10 138826347 138826535 -6762753 + MIR SINE MIR 91 262 0 212 248 162 51 chr10 138826537 138826654 -6762634 - L2 LINE L2 -11 3302 3173 2192 110 0 7 chr10 138827173 138827481 -6761807 + AluSc SINE Alu 3 308 -1 1888 130 18 0 chr10 138827802 138828134 -6761154 + AluSx SINE Alu 1 337 0 207 0 0 0 chr10 138828466 138828489 -6760799 + (A)n Simple_repeat Simple_repeat 1 23 0 1477 163 89 44 chr10 138829223 138829480 -6759808 + L1MA8 LINE L1 5912 6191 -100 1979 135 3 19 chr10 138829480 138829792 -6759496 + AluSq SINE Alu 1 307 -6 1477 163 89 44 chr10 138829792 138829895 -6759393 + L1MA8 LINE L1 6191 6288 -3 273 244 24 24 chr10 138830047 138830129 -6759159 + LTR37B LTR ERV1 11 92 -376 695 211 90 24 chr10 138830179 138830345 -6758943 + MER58A DNA MER1_type 45 221 -3 862 226 112 68 chr10 138830349 138830689 -6758599 + LTR37B LTR ERV1 114 468 0 485 360 42 8 chr10 138834628 138834864 -6754424 + MIR SINE MIR 16 259 -3 1282 203 67 117 chr10 138835345 138835823 -6753465 + MLT1C LTR MaLR 6 459 -8 207 0 0 0 chr10 138836687 138836710 -6752578 + (TC)n Simple_repeat Simple_repeat 2 24 0 23 0 0 0 chr10 138837123 138837146 -6752142 + AT_rich Low_complexity Low_complexity 1 23 0 210 171 0 0 chr10 138838110 138838151 -6751137 + (TG)n Simple_repeat Simple_repeat 1 41 0 483 227 39 47 chr10 138838390 138838518 -6750770 + MLT1L LTR MaLR 244 370 -245 734 229 14 0 chr10 138838807 138838947 -6750341 - MER45A DNA AcHobo -35 143 2 526 178 11 0 chr10 138838975 138839065 -6750223 - MER58B DNA MER1_type -3 338 248 * 659 295 50 33 chr10 138839054 138839510 -6749778 + MLT1K LTR MaLR 90 580 -8 515 308 99 33 chr10 138840400 138840416 -6748872 + L1M4 LINE L1 4875 4889 -1257 2344 110 0 3 chr10 138840416 138840725 -6748563 - AluSx SINE Alu -4 308 1 515 308 99 33 chr10 138840725 138841042 -6748246 + L1M4 LINE L1 4889 5230 -916 326 312 96 13 chr10 138841577 138841734 -6747554 - MER20 DNA MER1_type -45 174 5 357 195 0 122 chr10 138842051 138842181 -6747107 - L1MC4 LINE L1 0 8038 7880 753 73 91 9 chr10 138842202 138842312 -6746976 - AluSc SINE Alu -30 279 161 415 281 22 7 chr10 138842402 138842537 -6746751 - L1MC4 LINE L1 -143 7899 7763 1874 136 3 18 chr10 138844250 138844536 -6744752 + AluSx SINE Alu 1 282 -30 237 245 0 0 chr10 138845475 138845528 -6743760 + L2 LINE L2 3258 3310 -3 529 309 39 15 chr10 138846630 138846834 -6742454 + MIR SINE MIR 54 262 0 2376 100 33 36 chr10 138848717 138849077 -6740211 + THE1B LTR MaLR 1 359 -5 872 149 74 70 chr10 138850121 138850336 -6738952 + MER20 DNA MER1_type 1 216 -3 243 0 0 0 chr10 138854721 138854748 -6734540 + (TTTTA)n Simple_repeat Simple_repeat 3 29 0 514 196 0 0 chr10 138855071 138855173 -6734115 - L1MB7 LINE L1 0 6184 6083 1293 85 49 54 chr10 138855928 138856152 -6733136 + AluY SINE Alu 84 306 -5 832 249 18 5 chr10 138857095 138857312 -6731976 - L1MD2 LINE L1 -13 6346 6127 204 311 14 0 chr10 138857385 138857459 -6731829 - MIR SINE MIR -13 249 175 294 178 96 14 chr10 138857767 138857840 -6731448 - MIR SINE MIR -99 163 85 341 154 0 0 chr10 138857840 138857892 -6731396 - MLT2B3 LTR ERVL 0 554 503 729 75 0 70 chr10 138857892 138858149 -6731139 + (TGGA)n Simple_repeat Simple_repeat 1 238 0 877 155 6 25 chr10 138858296 138858457 -6730831 - MLT2B3 LTR ERVL -396 158 1 193 250 42 14 chr10 138858457 138858529 -6730759 - MIR SINE MIR -173 89 16 614 282 5 5 chr10 138859814 138860002 -6729286 + MIR SINE MIR 23 210 -52 193 310 155 7 chr10 138861688 138861843 -6727445 + MER5B DNA MER1_type 1 178 0 363 254 49 16 chr10 138861988 138862110 -6727178 + MIR3 SINE MIR 53 178 -30 240 111 0 0 chr10 138862548 138862584 -6726704 + (ATG)n Simple_repeat Simple_repeat 1 36 0 198 308 0 0 chr10 138863708 138863760 -6725528 - L2 LINE L2 -31 3241 3190 291 283 140 48 chr10 138864253 138864667 -6724621 + L2 LINE L2 2854 3305 -8 1471 170 74 51 chr10 138866526 138866862 -6722426 - MER2 DNA MER2_type 0 344 1 226 276 235 10 chr10 138867201 138867299 -6721989 + L2 LINE L2 3151 3270 -2 1000 65 0 0 chr10 138867443 138867567 -6721721 - AluY SINE Alu -13 298 175 1000 65 0 0 chr10 138868124 138868248 -6721040 - AluY SINE Alu -13 298 175 326 271 0 0 chr10 138869643 138869728 -6719560 - MIR SINE MIR -113 149 65 995 212 59 156 chr10 138871569 138872360 -6716928 + L1MC5 LINE L1 7048 7762 -199 2612 128 34 0 chr10 138872902 138873316 -6715972 - MSTA LTR MaLR 0 428 1 3558 123 19 8 chr10 138873558 138874080 -6715208 - MER1A DNA MER1_type 0 529 2 2545 168 33 37 chr10 138874263 138874782 -6714506 - L1MB3 LINE L1 -1 6182 5666 4330 78 7 0 chr10 138875166 138875715 -6713573 - MER41A LTR ERV1 -1 553 1 839 133 203 0 chr10 138876726 138876884 -6712404 + MER3 DNA MER1_type 1 190 -19 250 313 53 20 chr10 138876884 138877034 -6712254 - MER5A DNA MER1_type -8 181 27 198 309 90 92 chr10 138877512 138877836 -6711452 + L2 LINE L2 2379 2703 -611 1571 177 0 4 chr10 138877836 138878096 -6711192 + AluJb SINE Alu 37 295 -17 198 309 90 92 chr10 138878096 138878228 -6711060 + L2 LINE L2 2703 2834 -480 240 289 165 0 chr10 138878486 138878583 -6710705 + L2 LINE L2 3199 3311 -2 25 75 0 0 chr10 138878798 138878851 -6710437 + AT_rich Low_complexity Low_complexity 1 53 0 893 294 91 50 chr10 138880625 138881228 -6708060 - L3 LINE CR1 -534 1043 416 227 111 0 111 chr10 138882394 138882457 -6706831 - L1MC/D LINE L1 -2016 5792 5737 2261 110 0 10 chr10 138885206 138885507 -6703781 + AluSx SINE Alu 1 298 -14 327 270 30 0 chr10 138885719 138885819 -6703469 + MER94 DNA DNA 19 121 -13 354 246 186 0 chr10 138885842 138885960 -6703328 - MIR SINE MIR -71 191 52 191 306 143 0 chr10 138886464 138886562 -6702726 - MIR SINE MIR -41 221 110 322 130 0 0 chr10 138887958 138888004 -6701284 - MER53 DNA DNA -5 184 139 446 220 64 0 chr10 138888070 138888179 -6701109 - MER53 DNA DNA -73 116 1 2370 107 0 19 chr10 138888624 138888942 -6700346 + AluSx SINE Alu 1 312 0 426 259 36 0 chr10 138889868 138889980 -6699308 + MIR SINE MIR 68 183 -79 247 296 46 37 chr10 138891447 138891555 -6697733 - MIR SINE MIR -124 138 30 315 285 122 0 chr10 138892909 138893032 -6696256 - MIR3 SINE MIR -63 145 8 537 260 164 6 chr10 138894054 138894231 -6695057 + MIR SINE MIR 46 250 -12 368 264 75 0 chr10 138894273 138894379 -6694909 - L2 LINE L2 -16 3256 3143 611 217 6 26 chr10 138894561 138894909 -6694379 + (CACCAT)n Simple_repeat Simple_repeat 1 341 0 205 311 0 0 chr10 138894938 138894999 -6694289 - MIR SINE MIR -15 247 187 347 261 188 0 chr10 138895034 138895172 -6694116 + MER5A DNA MER1_type 26 189 0 251 191 16 0 chr10 138897122 138897185 -6692103 + C-rich Low_complexity Low_complexity 5 68 0 344 310 14 125 chr10 138897551 138897848 -6691440 + L2 LINE L2 2987 3250 -22 581 320 104 22 chr10 138897874 138898287 -6691001 - L1ME LINE L1 -411 5710 5264 475 302 212 38 chr10 138898933 138899546 -6689742 + L2 LINE L2 1645 2364 -950 2221 189 62 25 chr10 138899574 138900060 -6689228 + MLT1D LTR MaLR 1 504 -1 269 285 76 57 chr10 138902958 138903116 -6686172 + MIR SINE MIR 22 182 -80 302 311 20 33 chr10 138904111 138904262 -6685026 - L2 LINE L2 -856 2458 2310 609 235 49 25 chr10 138904694 138904856 -6684432 + MER97a DNA MER1_type? 14 179 -715 550 197 0 141 chr10 138905097 138905150 -6684138 - L1MC5 LINE L1 -39 7922 7863 216 0 0 0 chr10 138905150 138905174 -6684114 + (CTATT)n Simple_repeat Simple_repeat 2 25 0 550 197 0 141 chr10 138905174 138905318 -6683970 - L1MC5 LINE L1 -98 7863 7753 1847 125 7 0 chr10 138906016 138906316 -6682972 + AluSq SINE Alu 1 302 0 180 0 0 0 chr10 138906318 138906338 -6682950 + (TTAA)n Simple_repeat Simple_repeat 1 20 0 22 0 0 0 chr10 138906427 138906449 -6682839 + AT_rich Low_complexity Low_complexity 1 22 0 393 284 146 41 chr10 138908194 138908632 -6680656 - L2 LINE L2 -54 3259 2782 1660 189 44 56 chr10 138908788 138909216 -6680072 + L1MB7 LINE L1 5743 6165 -19 351 296 159 32 chr10 138909451 138909640 -6679648 + MIR SINE MIR 48 260 -2 236 242 176 0 chr10 138911172 138911263 -6678025 - MIR SINE MIR -10 252 146 351 44 0 0 chr10 138911293 138911338 -6677950 + (TG)n Simple_repeat Simple_repeat 2 46 0 263 362 43 18 chr10 138912639 138912802 -6676486 - L2 LINE L2 -208 3064 2898 4019 126 5 10 chr10 138914221 138914838 -6674450 + L1P LINE L1 3658 4271 -1875 278 290 6 119 chr10 138915855 138916031 -6673257 + MIR SINE MIR 49 204 -58 190 212 0 0 chr10 138916144 138916177 -6673111 + L2 LINE L2 3210 3242 -30 647 235 34 67 chr10 138916417 138916470 -6672818 - MIR SINE MIR -11 251 198 1934 122 14 0 chr10 138916470 138916826 -6672462 - AluSx SINE Alu 0 360 1 647 235 34 67 chr10 138916826 138916950 -6672338 - MIR SINE MIR -64 198 79 204 218 73 18 chr10 138916944 138916999 -6672289 - L3 LINE CR1 -328 1249 1192 * 1462 120 7 76 chr10 138917603 138917878 -6671410 + AluJo SINE Alu 42 297 -15 2017 88 0 52 chr10 138917878 138918184 -6671104 + AluSq SINE Alu 18 307 -6 933 206 37 5 chr10 138918796 138918985 -6670303 - MER3 DNA MER1_type -14 195 1 23 33 0 0 chr10 138919589 138919619 -6669669 + AT_rich Low_complexity Low_complexity 1 30 0 231 211 0 19 chr10 138919669 138919721 -6669567 + (TATG)n Simple_repeat Simple_repeat 2 52 0 1969 163 42 6 chr10 138920435 138920792 -6668496 - MLT1B LTR MaLR -1 389 20 1045 290 104 45 chr10 138920957 138921232 -6668056 - L1ME3 LINE L1 -211 5951 5694 3071 121 73 32 chr10 138921232 138921738 -6667550 - MER1A DNA MER1_type 0 527 1 1045 290 104 45 chr10 138921738 138922484 -6666804 - L1ME3 LINE L1 -468 5694 4845 2298 104 0 0 chr10 138922484 138922792 -6666496 + AluSx SINE Alu 1 308 -4 1045 290 104 45 chr10 138922792 138922957 -6666331 - L1ME3 LINE L1 -1317 4845 4691 755 200 0 0 chr10 138922979 138923114 -6666174 - FLAM_A SINE Alu -1 141 7 352 291 65 22 chr10 138923121 138923294 -6665994 - L1MCa LINE L1 -978 1809 1382 21 0 0 0 chr10 138924407 138924428 -6664860 + AT_rich Low_complexity Low_complexity 1 21 0 247 370 144 16 chr10 138926077 138926382 -6662906 + L2 LINE L2 2925 3268 -45 204 97 0 0 chr10 138926892 138926923 -6662365 + (CAG)n Simple_repeat Simple_repeat 3 33 0 212 305 17 0 chr10 138928242 138928301 -6660987 + MIR SINE MIR 93 152 -110 1326 156 71 212 chr10 138928330 138928896 -6660392 + MLT1E2 LTR MaLR 16 622 -4 186 222 0 56 chr10 138929167 138929221 -6660067 - L2 LINE L2 -19 3253 3203 1229 189 52 8 chr10 138931051 138931300 -6657988 - MER58B DNA MER1_type -3 338 79 946 175 34 6 chr10 138931316 138931493 -6657795 - MER5A DNA MER1_type -7 182 1 370 264 68 61 chr10 138931583 138931746 -6657542 + Charlie8 DNA MER1_type 56 219 -2198 277 219 41 27 chr10 138931814 138931887 -6657401 + Charlie8 DNA MER1_type 2344 2417 0 1666 129 7 11 chr10 138931948 138932219 -6657069 - AluSx SINE Alu -3 309 40 291 122 0 0 chr10 138933328 138933377 -6655911 + (TG)n Simple_repeat Simple_repeat 2 50 0 406 227 111 35 chr10 138933621 138933808 -6655480 + MIR SINE MIR 37 245 -17 330 26 0 0 chr10 138933973 138934012 -6655276 + (CA)n Simple_repeat Simple_repeat 2 40 0 420 91 0 0 chr10 138934764 138934830 -6654458 + (CA)n Simple_repeat Simple_repeat 2 67 0 21 0 0 0 chr10 138934984 138935005 -6654283 + AT_rich Low_complexity Low_complexity 1 21 0 1522 180 54 4 chr10 138935028 138935306 -6653982 - AluJo SINE Alu -20 292 1 550 330 153 30 chr10 138935362 138935826 -6653462 - L3 LINE CR1 -335 1242 722 872 256 47 49 chr10 138935846 138936151 -6653137 + L1ME LINE L1 5474 5779 -342 1629 157 0 24 chr10 138936151 138936444 -6652844 + AluJo SINE Alu 20 305 -7 872 256 47 49 chr10 138936444 138936482 -6652806 + L1ME LINE L1 5779 5816 -305 415 268 84 42 chr10 138937025 138937215 -6652073 + L1MEc LINE L1 786 983 -5413 1091 114 9 57 chr10 138940672 138940883 -6648405 - AluSp SINE Alu -15 298 98 1231 264 66 19 chr10 138941338 138941720 -6647568 + L1ME3A LINE L1 5658 6069 -101 593 72 12 0 chr10 138941720 138941803 -6647485 - L1PA13 LINE L1 -3 6160 6077 1231 264 66 19 chr10 138941803 138941904 -6647384 + L1ME3A LINE L1 6069 6164 -6 311 289 35 0 chr10 138942735 138942849 -6646439 + L1MC4 LINE L1 7924 8041 -1 2161 109 56 0 chr10 138943805 138944108 -6645180 + L1PA11 LINE L1 5852 6171 -3 982 276 148 33 chr10 138944976 138946011 -6643277 - L1MEc LINE L1 -4128 2268 1115 474 196 64 136 chr10 138946187 138946467 -6642821 - MER113 DNA MER1_type? -257 264 5 196 322 51 0 chr10 138946758 138946817 -6642471 - MER5A DNA MER1_type -86 103 42 9804 36 7 3 chr10 138947323 138948516 -6640772 - L1P LINE L1 -813 5333 4137 627 304 20 5 chr10 138948826 138949030 -6640258 - MIR SINE MIR -48 214 8 1437 266 117 48 chr10 138949474 138950019 -6639269 - MLT1E LTR MaLR 0 593 11 204 301 14 27 chr10 138950415 138950488 -6638800 + L2 LINE L2 3179 3250 -63 3540 217 59 58 chr10 138950613 138952016 -6637272 + L1MA7 LINE L1 750 2150 -4200 2890 89 3 21 chr10 138952016 138952398 -6636890 - THE1C LTR MaLR 0 375 1 3540 217 59 58 chr10 138952398 138952475 -6636813 + L1MA7 LINE L1 2150 3818 -2532 2516 275 31 24 chr10 138952633 138953331 -6635957 - L1M3b LINE L1 -5577 704 2 212 301 65 32 chr10 138954484 138954577 -6634711 - MIR SINE MIR -113 149 54 1236 93 33 6 chr10 138955409 138955592 -6633696 + AluY SINE Alu 119 306 -5 3989 153 9 7 chr10 138955593 138956277 -6633011 + L1MA7 LINE L1 3901 4585 -1765 2323 114 57 23 chr10 138956277 138956629 -6632659 - THE1B LTR MaLR 0 364 1 13359 72 1 2 chr10 138956629 138958210 -6631078 - THE1B-int LTR MaLR 0 1580 1 1807 116 7 33 chr10 138958210 138958485 -6630803 - THE1B LTR MaLR 0 364 97 5436 167 26 20 chr10 138958605 138960140 -6629148 + L1MA7 LINE L1 4949 6495 0 358 186 169 42 chr10 138960793 138960911 -6628377 + MLT1H LTR MaLR 379 511 -38 447 279 95 89 chr10 138960916 138961621 -6627667 + L1M4 LINE L1 3687 4395 -1751 262 259 52 9 chr10 138961691 138961807 -6627481 + L1M4 LINE L1 5228 5348 -798 2685 115 13 11 chr10 138962509 138962883 -6626405 - THE1C LTR MaLR 0 375 1 285 252 76 8 chr10 138963257 138963376 -6625912 + L1 LINE L1 4924 5050 -1096 1937 257 59 32 chr10 138963448 138964364 -6624924 + L1MEc LINE L1 2033 2943 -3272 306 289 26 0 chr10 138964836 138964912 -6624376 - L2 LINE L2 -2 3270 3193 334 313 40 0 chr10 138964916 138965046 -6624242 - MIR SINE MIR -63 145 5 2205 105 14 0 chr10 138965138 138965434 -6623854 - AluSx SINE Alu -12 300 1 1252 161 18 36 chr10 138966479 138966702 -6622586 + MER20 DNA MER1_type 1 219 0 227 211 0 18 chr10 138969384 138969441 -6619847 + L1ME2 LINE L1 2001 2056 -4340 928 208 46 15 chr10 138969446 138969643 -6619645 + MER105 DNA DNA 1 203 -1 302 113 0 19 chr10 138969775 138969828 -6619460 + (GGAA)n Simple_repeat Simple_repeat 3 54 0 682 226 48 48 chr10 138969829 138970081 -6619207 + L1ME2 LINE L1 2159 2410 -3986 2804 200 81 76 chr10 138970098 138971137 -6618151 + L1ME2 LINE L1 5201 6385 -18 290 243 56 49 chr10 138971287 138971431 -6617857 - L1M4 LINE L1 -3729 2417 2273 546 115 0 0 chr10 138971820 138971898 -6617390 - AluJo SINE Alu -2 310 233 875 170 13 38 chr10 138971898 138972057 -6617231 - AluJo SINE Alu -157 155 1 380 214 0 0 chr10 138972319 138972389 -6616899 - L2 LINE L2 0 3313 3244 319 330 10 0 chr10 138973873 138973970 -6615318 - L2 LINE L2 -498 2816 2719 239 352 23 0 chr10 138974813 138974901 -6614387 + L2 LINE L2 3134 3223 -49 315 164 0 0 chr10 138974972 138975033 -6614255 + (TGGA)n Simple_repeat Simple_repeat 3 63 0 1117 249 134 24 chr10 138975206 138975631 -6613657 + MLT1F LTR MaLR 1 540 -53 2283 233 103 39 chr10 138976493 138977214 -6612074 - MER21B LTR ERV1 -85 778 12 396 169 78 0 chr10 138977401 138977478 -6611810 - MER53 DNA DNA -6 183 101 468 99 0 0 chr10 138977481 138977552 -6611736 + (TG)n Simple_repeat Simple_repeat 2 72 0 229 298 98 80 chr10 138978120 138978454 -6610834 + L2 LINE L2 1860 2208 -1106 2156 117 3 0 chr10 138978454 138978752 -6610536 - AluSx SINE Alu -13 299 1 229 298 98 80 chr10 138978752 138978930 -6610358 + L2 LINE L2 2208 2381 -933 719 156 9 0 chr10 138979288 138979397 -6609891 - AluSc SINE Alu -26 283 174 1186 169 53 4 chr10 138979499 138979724 -6609564 + L1MC3 LINE L1 6633 6868 -917 492 269 0 6 chr10 138979749 138980116 -6609172 + (CA)n Simple_repeat Simple_repeat 1 364 0 3723 211 60 14 chr10 138980132 138980257 -6609031 + L1MC3 LINE L1 6872 6990 -795 2785 105 6 3 chr10 138980257 138980620 -6608668 - THE1B LTR MaLR 0 364 1 3723 211 60 14 chr10 138980620 138981368 -6607920 + L1MC3 LINE L1 6990 7785 0 549 173 129 43 chr10 138981516 138981655 -6607633 + MER106B DNA MER1_type 1 151 -908 522 234 14 0 chr10 138982337 138982478 -6606810 + L1MC3 LINE L1 7643 7785 0 182 375 57 0 chr10 138982520 138982608 -6606680 + L2 LINE L2 3155 3247 -25 1177 248 90 3 chr10 138983518 138983829 -6605459 + MER58B DNA MER1_type 2 339 -2 579 182 83 61 chr10 138983909 138984090 -6605198 + MER20 DNA MER1_type 1 185 -34 249 321 80 7 chr10 138984193 138984330 -6604958 - MIR3 SINE MIR -58 150 4 399 334 101 19 chr10 138986589 138986954 -6602334 - L2 LINE L2 -1199 2115 1721 191 301 14 91 chr10 138987341 138987484 -6601804 - MIR SINE MIR -46 216 85 426 203 85 102 chr10 138987675 138987852 -6601436 + MER5B DNA MER1_type 2 175 -3 233 339 112 40 chr10 138987982 138988233 -6601055 + L2 LINE L2 2490 2758 -556 534 188 42 28 chr10 138988271 138988415 -6600873 + L2 LINE L2 2916 3061 -252 676 170 27 0 chr10 138988995 138989107 -6600181 + FLAM_C SINE Alu 2 116 -27 24 0 0 0 chr10 138989137 138989161 -6600127 + AT_rich Low_complexity Low_complexity 1 24 0 399 281 198 37 chr10 138989427 138989801 -6599487 + L2 LINE L2 2871 3304 -9 707 166 47 72 chr10 138990597 138990790 -6598498 - MER53 DNA DNA -1 188 1 22 70 0 0 chr10 138991441 138991484 -6597804 + AT_rich Low_complexity Low_complexity 1 43 0 22 35 0 0 chr10 138995810 138995839 -6593449 + AT_rich Low_complexity Low_complexity 1 29 0 2728 179 51 4 chr10 138997259 138997811 -6591477 + L1MC3 LINE L1 7200 7777 -8 204 384 13 7 chr10 138998400 138998551 -6590737 + MIR SINE MIR 55 206 -56 1057 198 89 75 chr10 138998562 138998911 -6590377 - MLT2B3 LTR ERVL 0 554 201 1315 189 14 89 chr10 138998916 138999265 -6590023 - MLT2B3 LTR ERVL -231 323 1 407 224 41 27 chr10 138999316 138999463 -6589825 + L1ME4a LINE L1 5973 6121 0 2886 3 0 0 chr10 138999780 139000085 -6589203 - AluYa5 SINE Alu -6 305 1 493 316 33 14 chr10 139001168 139001380 -6587908 - L2 LINE L2 -359 2955 2740 2282 115 0 3 chr10 139001381 139001686 -6587602 - AluSc SINE Alu -5 304 1 586 254 102 25 chr10 139001850 139002086 -6587202 - MIR SINE MIR -4 258 5 471 291 81 79 chr10 139002145 139002254 -6587034 + L2 LINE L2 2831 2938 -375 2281 82 10 10 chr10 139002254 139002548 -6586740 - AluSg1 SINE Alu -15 294 1 471 291 81 79 chr10 139002548 139002858 -6586430 + L2 LINE L2 2938 3251 -62 5504 47 34 6 chr10 139004584 139005267 -6584021 - L1PA5 LINE L1 0 6154 5453 10403 51 2 0 chr10 139005405 139006688 -6582600 - L1PA5 LINE L1 -3263 2883 1598 273 243 104 29 chr10 139006754 139006927 -6582361 - L1MC/D LINE L1 -721 5443 5255 897 168 34 17 chr10 139007889 139008068 -6581220 + MER53 DNA DNA 8 189 0 387 235 98 8 chr10 139011353 139011485 -6577803 - MER113 DNA MER1_type? -103 418 275 548 25 112 6 chr10 139061508 139061669 -6527619 + (TA)n Simple_repeat Simple_repeat 1 178 0 28 0 0 0 chr10 139061669 139061697 -6527591 + AT_rich Low_complexity Low_complexity 1 28 0 312 315 57 72 chr10 139061697 139062100 -6527188 - L1ME4a LINE L1 -13 6108 5712 327 291 73 64 chr10 139061802 139062022 -6527266 + L1MC5 LINE L1 7517 7738 -223 352 9 133 0 chr10 139062101 139062206 -6527082 + (TA)n Simple_repeat Simple_repeat 1 119 0 207 0 0 0 chr10 139062209 139062232 -6527056 + (CA)n Simple_repeat Simple_repeat 2 24 0 210 331 176 21 chr10 139062866 139063008 -6526280 + MIR SINE MIR 27 190 -72 438 331 55 57 chr10 139063067 139063487 -6525801 - L2 LINE L2 -12 3260 2842 322 293 223 45 chr10 139063539 139063893 -6525395 - L2 LINE L2 -727 2587 2297 2191 126 132 8 chr10 139063893 139064273 -6525015 - MSTA LTR MaLR 0 428 2 322 293 223 45 chr10 139064273 139064809 -6524479 - L2 LINE L2 -1017 2297 1538 1531 238 77 13 chr10 139064889 139065472 -6523816 - MLT1E3 LTR MaLR -5 619 5 192 258 73 79 chr10 139065809 139065987 -6523301 - L2 LINE L2 -2741 573 397 225 69 0 0 chr10 139066264 139066293 -6522995 + Alu SINE Alu 86 114 -188 2175 90 0 7 chr10 139066293 139066583 -6522705 - AluSc SINE Alu -21 288 1 441 36 0 0 chr10 139066664 139066720 -6522568 - AluY SINE Alu -15 296 241 4972 187 20 36 chr10 139066720 139067872 -6521416 + L1MD1 LINE L1 4771 5940 -302 2151 83 13 7 chr10 139067872 139068174 -6521114 - AluSx SINE Alu -8 304 1 4972 187 20 36 chr10 139068174 139068439 -6520849 + L1MD1 LINE L1 5940 6168 -74 1985 138 0 0 chr10 139068439 139068728 -6520560 - AluSx SINE Alu -23 289 1 4972 187 20 36 chr10 139068728 139068801 -6520487 + L1MD1 LINE L1 6168 6241 -1 538 146 30 21 chr10 139068870 139069001 -6520287 + L1M1 LINE L1 3463 3605 -3960 353 280 158 22 chr10 139069002 139069209 -6520079 + MIR SINE MIR 29 262 0 393 275 92 0 chr10 139070092 139070201 -6519087 + L2 LINE L2 3194 3312 -1 474 259 44 7 chr10 139070677 139070812 -6518476 + MIR SINE MIR 77 216 -46 1248 275 51 10 chr10 139070812 139071325 -6517963 + L1ME3 LINE L1 4869 5402 -744 886 190 0 0 chr10 139071342 139071484 -6517804 + Tigger3(Golem) DNA MER2_type 1 142 -2887 * 1563 156 12 4 chr10 139071481 139071737 -6517551 + Tigger3(Golem) DNA MER2_type 2771 3028 -1 2067 232 40 71 chr10 139071746 139072467 -6516821 + L1ME3 LINE L1 5461 6159 -3 1970 111 0 21 chr10 139073309 139073654 -6515634 + AluSx SINE Alu 1 339 0 2249 78 3 0 chr10 139075083 139075379 -6513909 + AluY SINE Alu 1 297 -14 327 370 20 0 chr10 139075513 139075659 -6513629 - L1ME3 LINE L1 -215 5947 5799 491 281 105 62 chr10 139076016 139076547 -6512741 + L2 LINE L2 2543 3091 -181 321 252 81 8 chr10 139076662 139076785 -6512503 + L2 LINE L2 3137 3268 -4 1230 235 50 0 chr10 139078550 139078831 -6510457 - MER58B DNA MER1_type -1 340 46 443 182 52 0 chr10 139080918 139080995 -6508293 - MER63 DNA MER1_type -302 759 679 246 291 68 26 chr10 139081352 139081469 -6507819 + MIR SINE MIR 105 226 -36 812 166 33 17 chr10 139081795 139081976 -6507312 - MER20 DNA MER1_type 0 219 36 548 36 112 3 chr10 139082716 139083019 -6506269 + (TA)n Simple_repeat Simple_repeat 1 336 0 207 0 0 0 chr10 139083022 139083045 -6506243 + (CA)n Simple_repeat Simple_repeat 2 24 0 444 93 0 40 chr10 139083463 139083538 -6505750 + L1PB3 LINE L1 6082 6153 -1 189 175 0 0 chr10 139084706 139084746 -6504542 + (CA)n Simple_repeat Simple_repeat 2 41 0 2098 103 3 0 chr10 139086945 139087227 -6502061 + AluSp SINE Alu 1 283 -30 409 280 80 11 chr10 139087791 139087966 -6501322 - MER5A DNA MER1_type 0 189 3 291 54 0 0 chr10 139088192 139088229 -6501059 + (TG)n Simple_repeat Simple_repeat 1 37 0 2513 56 0 0 chr10 139088348 139088650 -6500638 + AluY SINE Alu 1 302 -9 528 282 39 6 chr10 139088934 139089090 -6500198 + MER5B DNA MER1_type 1 161 -17 303 49 0 0 chr10 139089423 139089464 -6499824 + (GA)n Simple_repeat Simple_repeat 1 41 0 382 250 24 57 chr10 139089486 139089610 -6499678 + MER5A DNA MER1_type 50 169 -20 270 266 28 64 chr10 139089647 139089756 -6499532 + MER5A DNA MER1_type 65 169 -20 285 257 28 64 chr10 139089793 139089902 -6499386 + MER5A DNA MER1_type 65 169 -20 218 159 45 23 chr10 139090880 139090924 -6498364 - L2 LINE L2 -7 3306 3262 2049 132 27 57 chr10 139091124 139091526 -6497762 - MLT1B LTR MaLR 0 390 1 1027 188 34 10 chr10 139092623 139092830 -6496458 - L1MB3 LINE L1 -2 6181 5970 180 77 0 0 chr10 139093535 139093561 -6495727 + (GA)n Simple_repeat Simple_repeat 1 26 0 953 70 7 0 chr10 139093562 139093705 -6495583 + (TG)n Simple_repeat Simple_repeat 2 145 0 287 308 116 14 chr10 139094509 139094655 -6494633 + MIR SINE MIR 75 235 -27 3383 171 29 0 chr10 139096369 139096954 -6492334 + MER7C DNA MER2_type 1 602 0 407 317 122 6 chr10 139097701 139097881 -6491407 + MIR SINE MIR 56 256 -6 1361 176 18 19 chr10 139097948 139098409 -6490879 - MLT1D LTR MaLR -1 504 1 256 273 146 0 chr10 139098746 139098856 -6490432 + LTR16A1 LTR ERVL 1 126 -331 2322 117 0 0 chr10 139098903 139099203 -6490085 + AluSc SINE Alu 1 300 -9 503 211 139 48 chr10 139099211 139099420 -6489868 + LTR16A1 LTR ERVL 230 457 0 524 230 45 56 chr10 139099449 139099627 -6489661 + MER5A DNA MER1_type 1 176 -13 1213 246 59 41 chr10 139101891 139102334 -6486954 - MLT1C LTR MaLR -9 458 8 2295 111 3 0 chr10 139103260 139103567 -6485721 + AluSp SINE Alu 1 308 -5 408 326 44 0 chr10 139103837 139104018 -6485270 - MIR SINE MIR -1 261 73 241 320 49 16 chr10 139104081 139104203 -6485085 + MIR SINE MIR 20 145 -117 204 406 0 0 chr10 139104646 139104774 -6484514 - L2 LINE L2 -11 3261 3134 2528 161 63 10 chr10 139104837 139105341 -6483947 - L1MB3 LINE L1 0 6183 5653 351 0 0 0 chr10 139107297 139107336 -6481952 + (CA)n Simple_repeat Simple_repeat 2 40 0 2515 70 0 0 chr10 139107519 139107817 -6481471 - AluY SINE Alu -13 298 1 4551 165 32 10 chr10 139107823 139108692 -6480596 - L1MB7 LINE L1 0 6184 5297 692 300 25 8 chr10 139108843 139109086 -6480202 + MIR SINE MIR 16 262 0 411 284 9 26 chr10 139109080 139109196 -6480092 - L2 LINE L2 -1 3312 3199 * 185 282 82 0 chr10 139109890 139109975 -6479313 + MIR SINE MIR 61 152 -110 809 283 70 59 chr10 139110214 139111127 -6478161 + L1ME3A LINE L1 4724 5651 -519 453 254 61 6 chr10 139111127 139111292 -6477996 - MER104 DNA MER2_type -2 178 5 809 283 70 59 chr10 139111292 139111499 -6477789 + L1ME3A LINE L1 5651 5854 -316 593 242 137 22 chr10 139111502 139111903 -6477385 + L1ME LINE L1 3095 3541 -2605 191 36 36 0 chr10 139112100 139112128 -6477160 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 302 217 6 140 chr10 139112143 139112165 -6477123 + L1ME LINE L1 3684 3707 -2439 2430 96 3 0 chr10 139112165 139112477 -6476811 + AluSq SINE Alu 1 313 0 302 217 6 140 chr10 139112477 139112509 -6476779 + L1ME LINE L1 3707 3742 -2404 1007 180 27 40 chr10 139112509 139112731 -6476557 + MER20 DNA MER1_type 1 219 0 302 217 6 140 chr10 139112731 139112832 -6476456 + L1ME LINE L1 3742 3819 -2327 * 1479 251 24 2 chr10 139112809 139113235 -6476053 + L1ME LINE L1 4891 5325 -821 2499 43 0 20 chr10 139113829 139114131 -6475157 + AluY SINE Alu 1 296 -15 2454 51 0 7 chr10 139114287 139114580 -6474708 - AluY SINE Alu -20 291 1 230 285 181 14 chr10 139115043 139115187 -6474101 + MIR SINE MIR 83 250 -12 219 232 0 0 chr10 139116463 139116519 -6472769 + (TA)n Simple_repeat Simple_repeat 2 57 0 2397 84 0 0 chr10 139116582 139116880 -6472408 + AluY SINE Alu 1 298 -13 873 55 0 0 chr10 139116893 139117003 -6472285 + L1PA5 LINE L1 6045 6154 0 200 200 225 8 chr10 139117830 139117950 -6471338 - MIR SINE MIR -115 147 2 2297 173 70 18 chr10 139119130 139119363 -6469925 + MLT1C LTR MaLR 1 220 -247 2444 96 61 0 chr10 139119363 139119706 -6469582 - THE1B LTR MaLR 0 364 1 2297 173 70 18 chr10 139119706 139119916 -6469372 + MLT1C LTR MaLR 220 467 0 322 326 35 7 chr10 139119997 139120141 -6469147 - MIR SINE MIR -112 150 3 431 272 104 69 chr10 139121242 139121723 -6467565 + L1MB5 LINE L1 4175 4684 -1462 1832 174 0 26 chr10 139121723 139122034 -6467254 + AluJb SINE Alu 1 303 -9 431 272 104 69 chr10 139122034 139122174 -6467114 + L1MB5 LINE L1 4684 4818 -1328 32 43 0 0 chr10 139122671 139122717 -6466571 + AT_rich Low_complexity Low_complexity 1 46 0 4100 187 46 25 chr10 139122726 139123567 -6465721 + L1MB5 LINE L1 5173 6037 -137 2338 112 0 0 chr10 139123567 139123870 -6465418 + AluSx SINE Alu 1 303 -9 4100 187 46 25 chr10 139123870 139124010 -6465278 + L1MB5 LINE L1 6037 6173 -1 418 265 90 73 chr10 139124000 139124262 -6465026 + L1ME LINE L1 5421 5691 -472 * 564 269 0 6 chr10 139124623 139124783 -6464505 + MIR SINE MIR 104 262 0 753 259 94 15 chr10 139125299 139125565 -6463723 - Charlie8 DNA MER1_type -2130 287 1 6101 207 61 46 chr10 139127271 139128191 -6461097 + L1ME3A LINE L1 95 1000 -5540 1659 164 58 3 chr10 139128191 139128484 -6460804 + AluSx SINE Alu 3 311 -1 2468 62 13 0 chr10 139128484 139128790 -6460498 + AluY SINE Alu 1 310 -1 6101 207 61 46 chr10 139128790 139129469 -6459819 + L1ME3A LINE L1 999 1719 -4821 378 259 0 15 chr10 139129465 139129600 -6459688 + L1M4 LINE L1 4566 4698 -1448 * 374 183 0 0 chr10 139129607 139129667 -6459621 + AluJ/FLAM SINE Alu 1 60 -242 216 0 0 0 chr10 139130358 139130382 -6458906 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 2984 100 47 13 chr10 139132466 139132717 -6456571 + MER41A LTR ERV1 1 275 -279 4176 85 18 0 chr10 139132717 139133261 -6456027 - MER41A LTR ERV1 0 554 1 2984 100 47 13 chr10 139133261 139133460 -6455828 + MER41A LTR ERV1 275 466 -88 2066 163 66 51 chr10 139133460 139133913 -6455375 - LTR2B LTR ERV1 0 490 31 533 152 54 0 chr10 139133926 139134018 -6455270 + MER41A LTR ERV1 458 554 0 182 273 61 30 chr10 139134184 139134250 -6455038 + L2 LINE L2 3190 3257 -15 300 256 94 31 chr10 139134728 139134888 -6454400 + L1M LINE L1 5256 5425 -2383 763 265 38 52 chr10 139134892 139135258 -6454030 + L1ME3A LINE L1 4059 4419 -2121 322 174 290 0 chr10 139135260 139135329 -6453959 + 5S rRNA rRNA 2 90 -31 6045 151 19 68 chr10 139135333 139137740 -6451548 + L1MA5A LINE L1 4016 6297 0 2382 258 81 13 chr10 139137737 139139328 -6449960 + L1ME3A LINE L1 4639 6340 -224 * 586 203 120 6 chr10 139139353 139139511 -6449777 + L1ME3A LINE L1 6384 6559 -5 252 86 0 0 chr10 139139702 139139737 -6449551 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 1768 123 0 0 chr10 139139752 139139987 -6449301 - AluSq SINE Alu -78 235 1 401 280 34 8 chr10 139140228 139140346 -6448942 - MIR SINE MIR -15 247 127 2392 78 7 0 chr10 139140820 139141114 -6448174 + AluY SINE Alu 1 296 -15 377 219 20 7 chr10 139141165 139141311 -6447977 + (TG)n Simple_repeat Simple_repeat 2 149 0 370 309 43 22 chr10 139142154 139142293 -6446995 + LTR67 LTR ERVL 37 178 -379 970 177 23 50 chr10 139143397 139143617 -6445671 - MER20 DNA MER1_type -5 214 1 1745 178 0 14 chr10 139144281 139144574 -6444714 + AluJo SINE Alu 2 290 -22 444 294 4 0 chr10 139144633 139144911 -6444377 + (TCTG)n Simple_repeat Simple_repeat 1 279 0 504 223 12 17 chr10 139145647 139146067 -6443221 + GA-rich Low_complexity Low_complexity 1 418 0 289 221 0 76 chr10 139146248 139146411 -6442877 + MER5A DNA MER1_type 1 189 0 1662 220 19 16 chr10 139147730 139148103 -6441185 - MLT1A2 LTR MaLR 0 374 1 10862 201 21 32 chr10 139148354 139149060 -6440228 + L1PA11 LINE L1 445 1157 -6427 195 69 0 0 chr10 139149060 139149089 -6440199 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 10862 201 21 32 chr10 139149089 139151242 -6438046 + L1PA11 LINE L1 1157 4537 -3047 13678 130 31 12 chr10 139151249 139154156 -6435132 + L1PA11 LINE L1 4686 7612 0 259 264 11 77 chr10 139154578 139154669 -6434619 + L1ME4a LINE L1 5817 5901 -1907 361 233 23 0 chr10 139154762 139154848 -6434440 + L1ME4a LINE L1 5946 6033 -88 478 296 131 27 chr10 139154904 139155446 -6433842 - L2 LINE L2 -7 3306 2688 780 227 27 0 chr10 139156357 139156542 -6432746 + L1MC3 LINE L1 4942 5131 -1015 1261 168 9 26 chr10 139156544 139156770 -6432518 + AluJb SINE Alu 82 303 -9 2058 196 49 42 chr10 139156771 139156917 -6432371 + L1MC3 LINE L1 5138 5281 -885 2527 134 0 0 chr10 139156917 139157283 -6432005 - MER47A DNA MER2_type 0 366 1 2058 196 49 42 chr10 139157283 139157778 -6431510 + L1MC3 LINE L1 5281 5705 -461 378 347 199 5 chr10 139157785 139158186 -6431102 - L2 LINE L2 -349 2965 2487 709 233 263 22 chr10 139158192 139158557 -6430731 - L3 LINE CR1 -754 823 371 2224 49 0 56 chr10 139159629 139159917 -6429371 - AluY SINE Alu -10 301 30 397 328 24 0 chr10 139160527 139160652 -6428636 + (CGTG)n Simple_repeat Simple_repeat 4 131 0 242 148 19 0 chr10 139161154 139161208 -6428080 + (TG)n Simple_repeat Simple_repeat 2 56 0 2454 224 38 29 chr10 139161262 139161919 -6427369 + L1MA9 LINE L1 5620 6282 -30 454 203 6 123 chr10 139163129 139163292 -6425996 + MER104 DNA Tc2 37 180 0 316 192 20 0 chr10 139163387 139163486 -6425802 + GA-rich Low_complexity Low_complexity 1 101 0 2695 81 21 13 chr10 139163582 139163954 -6425334 - THE1C LTR MaLR 0 375 1 615 286 6 0 chr10 139163990 139164172 -6425116 + MIR SINE MIR 45 227 -35 501 17 0 0 chr10 139166315 139166373 -6422915 + (CATA)n Simple_repeat Simple_repeat 2 59 0 3207 221 79 15 chr10 139167467 139168316 -6420972 + Charlie1a DNA MER1_type 73 975 -480 1425 152 17 106 chr10 139168317 139168577 -6420711 + L1MB3 LINE L1 5866 6089 -94 1978 137 0 10 chr10 139168577 139168870 -6420418 - AluJo SINE Alu -22 290 1 1425 152 17 106 chr10 139168870 139168958 -6420330 + L1MB3 LINE L1 6089 6183 0 2317 179 28 18 chr10 139168964 139169457 -6419831 + Charlie1a DNA MER1_type 958 1455 0 414 309 138 0 chr10 139169464 139169579 -6419709 + MIR SINE MIR 57 155 -107 2397 98 0 0 chr10 139169579 139169875 -6419413 + AluSq SINE Alu 1 296 -17 414 309 138 0 chr10 139169875 139169940 -6419348 + MIR SINE MIR 155 262 0 188 250 42 0 chr10 139170261 139170333 -6418955 - L2 LINE L2 -530 2784 2710 382 256 99 6 chr10 139170558 139170730 -6418558 + LTR33 LTR ERVL 34 221 -300 293 292 10 10 chr10 139170866 139170962 -6418326 + LTR33 LTR ERVL 423 518 -3 273 373 9 0 chr10 139171000 139171110 -6418178 + L2 LINE L2 3203 3313 0 3527 181 27 23 chr10 139171420 139172116 -6417172 - L1MB7 LINE L1 0 6184 5486 972 155 0 115 chr10 139172368 139172497 -6416791 - MER3 DNA MER1_type -5 204 110 2210 125 0 0 chr10 139172497 139172794 -6416494 + AluSx SINE Alu 1 297 -15 972 155 0 115 chr10 139172794 139172890 -6416398 - MER3 DNA MER1_type -99 110 5 21 0 0 0 chr10 139173493 139173514 -6415774 + AT_rich Low_complexity Low_complexity 1 21 0 1698 150 3 69 chr10 139173670 139174004 -6415284 - AluJo SINE Alu 0 312 1 190 185 185 0 chr10 139174703 139174757 -6414531 - MIR SINE MIR -113 149 86 311 267 63 45 chr10 139175508 139175771 -6413517 - MLT1H LTR MaLR -224 325 19 695 188 27 65 chr10 139178583 139178769 -6410519 - MER104 DNA MER2_type 0 180 2 202 364 80 24 chr10 139178842 139179092 -6410196 - L3 LINE CR1 -119 1458 1195 376 277 145 47 chr10 139179092 139179327 -6409961 - L1ME3A LINE L1 -7 6163 5906 1360 58 6 0 chr10 139179350 139179521 -6409767 + L1PA13 LINE L1 5708 5879 -284 1265 275 101 53 chr10 139179547 139180085 -6409203 - L1ME3A LINE L1 -260 5904 5311 1685 183 33 13 chr10 139180085 139180391 -6408897 - AluJb SINE Alu 0 312 1 1265 275 101 53 chr10 139180391 139180746 -6408542 - L1ME3A LINE L1 -853 5311 4975 286 130 0 0 chr10 139180849 139180895 -6408393 - L1ME3A LINE L1 -1354 4792 4747 22 0 0 0 chr10 139180908 139180930 -6408358 + AT_rich Low_complexity Low_complexity 1 22 0 328 276 47 19 chr10 139181377 139181591 -6407697 - L1ME4a LINE L1 -210 5911 5692 824 231 38 9 chr10 139182877 139183089 -6406199 + MER20 DNA MER1_type 1 218 -1 523 308 176 18 chr10 139183591 139184017 -6405271 + L2 LINE L2 2687 3220 -93 2229 123 3 0 chr10 139184017 139184317 -6404971 + AluSx SINE Alu 1 301 -11 523 308 176 18 chr10 139184317 139184427 -6404861 + L2 LINE L2 3220 3311 -2 2141 125 0 0 chr10 139184521 139184810 -6404478 + AluSg SINE Alu 1 289 -21 258 242 212 0 chr10 139184915 139185014 -6404274 - LTR67 LTR ERVL -28 529 410 2115 116 20 0 chr10 139186288 139186417 -6402871 + AluSx SINE Alu 1 126 -186 189 0 0 0 chr10 139186417 139186438 -6402850 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 2115 116 20 0 chr10 139186438 139186602 -6402686 + AluSx SINE Alu 126 300 -12 2176 131 3 3 chr10 139187445 139187757 -6401531 - AluSx SINE Alu 0 312 1 554 242 17 0 chr10 139188224 139188344 -6400944 - FLAM_A SINE Alu -11 122 1 192 309 119 0 chr10 139188612 139188696 -6400592 + MIR3 SINE MIR 100 193 -15 366 129 0 0 chr10 139188810 139188872 -6400416 + (TGGA)n Simple_repeat Simple_repeat 4 65 0 209 316 51 20 chr10 139191148 139191246 -6398042 + MIR SINE MIR 91 191 -71 313 308 0 0 chr10 139191495 139191586 -6397702 + MER69 DNA AcHobo 2434 2524 -2 341 326 127 45 chr10 139191701 139192103 -6397185 + L2 LINE L2 2817 3251 -21 395 250 26 46 chr10 139193070 139193222 -6396066 + MLT1H LTR MaLR 1 149 -400 350 240 139 31 chr10 139193305 139193480 -6395808 + MLT1H LTR MaLR 359 592 -3 3974 174 26 18 chr10 139194346 139195108 -6394180 + L1MB1 LINE L1 5401 6168 0 402 280 73 12 chr10 139195120 139195289 -6393999 - MIR SINE MIR -49 213 34 207 280 182 30 chr10 139197848 139197980 -6391308 - L2 LINE L2 -3 3310 3159 258 311 253 11 chr10 139198176 139198555 -6390733 - L2 LINE L2 -448 2866 2396 1088 205 68 7 chr10 139199035 139199436 -6389852 + LTR53 LTR ERVL 3 519 0 180 273 55 0 chr10 139199595 139199650 -6389638 - MER5A DNA MER1_type -71 118 61 2430 57 0 0 chr10 139202708 139203006 -6386282 + AluY SINE Alu 1 298 -13 322 265 46 99 chr10 139203090 139203392 -6385896 + L2 LINE L2 2148 2433 -881 358 311 12 107 chr10 139203644 139203888 -6385400 + L3 LINE CR1 1355 1575 -2 823 206 221 68 chr10 139204429 139204827 -6384461 + MER31B LTR ERV1 8 466 0 2539 21 0 0 chr10 139205442 139205732 -6383556 + L1PA2 LINE L1 5866 6155 0 1742 162 30 0 chr10 139205743 139205862 -6383426 + AluJo SINE Alu 1 115 -197 288 0 0 0 chr10 139205862 139205894 -6383394 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 1742 162 30 0 chr10 139205894 139206071 -6383217 + AluJo SINE Alu 115 306 -6 200 167 0 37 chr10 139206241 139206295 -6382993 + (CATA)n Simple_repeat Simple_repeat 3 54 0 22 0 0 0 chr10 139206338 139206360 -6382928 + AT_rich Low_complexity Low_complexity 1 22 0 187 304 51 13 chr10 139207460 139207539 -6381749 - L2 LINE L2 -7 3265 3184 415 328 57 32 chr10 139208158 139208405 -6380883 - MIR SINE MIR -2 260 8 889 154 24 23 chr10 139208429 139208619 -6380669 + MSTD LTR MaLR 1 184 -181 846 187 13 0 chr10 139208780 139208930 -6380358 + MSTD LTR MaLR 245 396 0 474 33 0 0 chr10 139209470 139209530 -6379758 + (TC)n Simple_repeat Simple_repeat 1 60 0 201 175 0 0 chr10 139210359 139210399 -6378889 + GA-rich Low_complexity Low_complexity 2 41 0 188 65 0 32 chr10 139210454 139210485 -6378803 + (GGGGA)n Simple_repeat Simple_repeat 5 34 0 534 216 6 68 chr10 139210883 139211045 -6378243 - MIR SINE MIR -65 197 46 976 237 113 21 chr10 139211698 139211989 -6377299 + MER46C DNA MER2_type 14 331 -7 14698 118 35 33 chr10 139213327 139215496 -6373792 - Tigger1 DNA MER2_type 0 2418 243 2186 81 3 0 chr10 139215496 139215781 -6373507 + AluSc SINE Alu 1 286 -23 14698 118 35 33 chr10 139215781 139216025 -6373263 - Tigger1 DNA MER2_type -2175 243 1 201 39 0 0 chr10 139216280 139216306 -6372982 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 429 284 52 0 chr10 139216587 139216703 -6372585 - MIR SINE MIR -17 245 124 556 321 24 37 chr10 139216731 139216977 -6372311 - MIR SINE MIR 0 262 20 811 262 38 15 chr10 139217046 139217313 -6371975 + L1ME1 LINE L1 5888 6160 -6 357 290 86 0 chr10 139217504 139217597 -6371691 + MER45B DNA AcHobo 1 101 -939 1485 196 44 3 chr10 139217603 139217924 -6371364 - L1MB4 LINE L1 0 6180 5847 241 216 39 39 chr10 139217927 139218029 -6371259 - L1MB4 LINE L1 -936 5210 5109 3341 219 59 26 chr10 139218029 139218060 -6371228 + MER45B DNA AcHobo 82 111 -1470 2236 112 0 0 chr10 139218060 139218373 -6370915 - AluSp SINE Alu 0 313 1 3341 219 59 26 chr10 139218373 139219210 -6370078 + MER45B DNA AcHobo 111 978 -62 234 0 0 0 chr10 139219214 139219240 -6370048 + (ATTG)n Simple_repeat Simple_repeat 4 29 0 736 148 37 0 chr10 139219241 139219349 -6369939 - FLAM_C SINE Alu -30 113 2 186 216 216 41 chr10 139220379 139220476 -6368812 - L2 LINE L2 -4 3268 3155 2280 197 82 74 chr10 139220560 139221209 -6368079 + MLT1E1 LTR MaLR 1 654 0 329 304 16 0 chr10 139221468 139221593 -6367695 - L1MEc LINE L1 -5035 1349 1223 648 300 87 4 chr10 139221716 139221946 -6367342 - MIR SINE MIR 0 262 14 180 200 0 0 chr10 139222073 139222128 -6367160 + CT-rich Low_complexity Low_complexity 1 55 0 1478 271 87 69 chr10 139222128 139223045 -6366243 - L1MEc LINE L1 -5216 1347 414 360 180 0 0 chr10 139223434 139223495 -6365793 + L2 LINE L2 3241 3301 -12 233 301 96 29 chr10 139223854 139223990 -6365298 + MIR SINE MIR 56 200 -62 535 268 128 6 chr10 139224851 139225030 -6364258 - MIR SINE MIR -48 214 14 1151 277 164 17 chr10 139226014 139226537 -6362751 + L1MEc LINE L1 35 634 -5762 901 165 31 62 chr10 139226541 139226735 -6362553 - MER20 DNA MER1_type 0 219 32 574 216 70 12 chr10 139226748 139226975 -6362313 + L1MEc LINE L1 660 936 -5460 2280 78 0 10 chr10 139227154 139227449 -6361839 + AluSg SINE Alu 1 292 -18 2192 89 0 0 chr10 139227500 139227815 -6361473 - AluY SINE Alu 0 315 1 225 0 0 0 chr10 139231152 139231177 -6358111 + (A)n Simple_repeat Simple_repeat 1 25 0 240 287 31 39 chr10 139231621 139231750 -6357538 + MIR SINE MIR 81 208 -54 365 296 56 0 chr10 139232348 139232456 -6356832 - MIR3 SINE MIR -24 184 71 192 307 27 13 chr10 139233594 139233669 -6355619 - MIR3 SINE MIR -23 185 110 236 300 100 9 chr10 139233695 139233805 -6355483 + MIR3 SINE MIR 11 130 -78 464 316 20 0 chr10 139234101 139234253 -6355035 + MIR SINE MIR 75 229 -33 243 228 35 0 chr10 139234867 139234924 -6354364 + MLT1K LTR MaLR 191 249 -339 1187 223 25 90 chr10 139234927 139235326 -6353962 + MLT1A2 LTR MaLR 1 373 -1 278 203 31 0 chr10 139235573 139235637 -6353651 + MLT1K LTR MaLR 510 575 -13 242 259 37 49 chr10 139235655 139235736 -6353552 - L2 LINE L2 0 3272 3193 43030 34 26 1 chr10 139236929 139242960 -6346328 + L1PA3 LINE L1 1 6186 0 318 224 0 0 chr10 139244516 139244601 -6344687 + (TA)n Simple_repeat Simple_repeat 2 86 0 233 217 17 0 chr10 139244686 139244746 -6344542 + L3 LINE CR1 1355 1415 -162 902 246 18 18 chr10 139244748 139244972 -6344316 + MER58A DNA MER1_type 1 224 0 188 191 24 0 chr10 139245284 139245326 -6343962 - MIR SINE MIR -102 160 118 183 220 0 0 chr10 139246045 139246095 -6343193 + CT-rich Low_complexity Low_complexity 1 50 0 203 313 12 0 chr10 139248537 139248617 -6340671 - L2 LINE L2 0 3272 3192 481 169 0 0 chr10 139248634 139248717 -6340571 + L1MB3 LINE L1 5528 5610 -573 2574 59 10 0 chr10 139248724 139249030 -6340258 + AluY SINE Alu 3 311 0 2604 135 20 22 chr10 139249030 139249483 -6339805 + L1MB3 LINE L1 5729 6180 -3 22 35 0 0 chr10 139249483 139249512 -6339776 + AT_rich Low_complexity Low_complexity 1 29 0 327 259 114 50 chr10 139250515 139250716 -6338572 + MLT1K LTR MaLR 375 588 0 2824 103 38 10 chr10 139250871 139251268 -6338020 - MER4A LTR ERV1 0 664 257 416 162 0 14 chr10 139251265 139251339 -6337949 - MER4A LTR ERV1 -567 97 25 * 10546 186 26 23 chr10 139251340 139251711 -6337577 - L1 LINE L1 -1744 5821 5452 1923 195 154 94 chr10 139251711 139252490 -6336798 - LTR1B LTR ERV1 0 826 1 10546 186 26 23 chr10 139252490 139252698 -6336590 - L1 LINE L1 -2113 5452 5246 3474 152 59 38 chr10 139252698 139253375 -6335913 - LTR8 LTR ERV1 0 691 1 10546 186 26 23 chr10 139253375 139254734 -6334554 - L1 LINE L1 -2319 5246 3892 210 71 0 0 chr10 139254734 139254762 -6334526 + (CA)n Simple_repeat Simple_repeat 1 28 0 10546 186 26 23 chr10 139254762 139255089 -6334199 - L1 LINE L1 -3673 3892 3543 2400 91 0 0 chr10 139255089 139255386 -6333902 + AluY SINE Alu 1 297 -14 10546 186 26 23 chr10 139255386 139255573 -6333715 - L1 LINE L1 -4022 3543 3358 2369 102 3 0 chr10 139256394 139256698 -6332590 + AluSg SINE Alu 1 305 -5 225 0 0 0 chr10 139256698 139256723 -6332565 + (TA)n Simple_repeat Simple_repeat 1 25 0 1705 153 17 47 chr10 139257654 139257848 -6331440 + AluJo SINE Alu 1 184 -128 2110 129 48 34 chr10 139257848 139258205 -6331083 + THE1B LTR MaLR 1 362 -2 1705 153 17 47 chr10 139258205 139258310 -6330978 + AluJo SINE Alu 184 291 -21 328 289 93 0 chr10 139258408 139258505 -6330783 - MLT1K LTR MaLR -4 584 479 5714 93 3 21 chr10 139259618 139260390 -6328898 + L1PB1 LINE L1 5328 6084 -67 2115 104 21 3 chr10 139260390 139260699 -6328589 + AluSq SINE Alu 1 313 0 5714 93 3 21 chr10 139260699 139260766 -6328522 + L1PB1 LINE L1 6084 6151 0 229 270 0 0 chr10 139260791 139260865 -6328423 + A-rich Low_complexity Low_complexity 1 74 0 1340 239 70 45 chr10 139260866 139261188 -6328100 + MLT1F1 LTR MaLR 118 453 -114 2372 109 0 0 chr10 139261188 139261490 -6327798 + AluSx SINE Alu 1 302 -10 1340 239 70 45 chr10 139261490 139261565 -6327723 + MLT1F1 LTR MaLR 453 525 -42 375 316 20 47 chr10 139261702 139261955 -6327333 - MIR SINE MIR -5 257 12 1662 180 103 56 chr10 139263569 139264014 -6325274 - MER31B LTR ERV1 0 466 1 262 261 81 43 chr10 139265248 139265409 -6323879 - MER117 DNA MER1_type -28 169 3 270 0 0 0 chr10 139265533 139265563 -6323725 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 675 225 46 41 chr10 139267114 139267332 -6321956 + MER20 DNA MER1_type 1 219 0 405 227 0 94 chr10 139267910 139268017 -6321271 + MER5B DNA MER1_type 1 96 -82 492 171 55 126 chr10 139268017 139268141 -6321147 - MER5A DNA MER1_type -4 185 79 2222 114 33 0 chr10 139268141 139268440 -6320848 - AluSx SINE Alu -3 309 1 492 171 55 126 chr10 139268440 139268514 -6320774 - MER5A DNA MER1_type -110 79 1 405 227 0 94 chr10 139268514 139268534 -6320754 + MER5B DNA MER1_type 96 116 -62 3992 87 19 2 chr10 139268534 139269074 -6320214 - MER41A LTR ERV1 0 554 6 392 167 0 0 chr10 139269071 139269131 -6320157 + LTR26B LTR ERV1 390 449 -82 * 585 124 21 10 chr10 139269131 139269228 -6320060 + MER4A LTR ERV1 1 98 -566 1706 150 5 62 chr10 139269228 139269594 -6319694 + MER4A LTR ERV1 261 664 0 454 220 20 10 chr10 139269594 139269680 -6319608 + LTR26B LTR ERV1 445 531 0 189 205 108 36 chr10 139269895 139269978 -6319310 + MIR3 SINE MIR 110 198 -10 2550 44 0 10 chr10 139270507 139270804 -6318484 - AluY SINE Alu -17 294 1 353 279 6 67 chr10 139270865 139270918 -6318370 + L1MEc LINE L1 46 101 -6295 1375 227 51 40 chr10 139270918 139271288 -6318000 + MLT1A2 LTR MaLR 1 374 0 353 279 6 67 chr10 139271288 139271399 -6317889 + L1MEc LINE L1 101 200 -6196 4874 212 77 57 chr10 139271636 139273153 -6316135 + L1MC4 LINE L1 6496 8042 0 3692 144 0 0 chr10 139273237 139273764 -6315524 + MER1A DNA MER1_type 1 527 0 185 309 123 12 chr10 139274267 139274348 -6314940 + MIR SINE MIR 37 126 -82 2361 109 0 0 chr10 139274406 139274708 -6314580 + AluSx SINE Alu 1 302 -10 668 231 39 6 chr10 139274729 139274885 -6314403 - MLT2E LTR ERVL -2 626 466 417 293 158 0 chr10 139274953 139275086 -6314202 - MLT2E LTR ERVL -357 271 118 1558 163 54 46 chr10 139275115 139275483 -6313805 - LTR52 LTR ERVL -36 385 15 329 280 34 25 chr10 139275516 139275634 -6313654 - MLT2E LTR ERVL -512 116 1 510 248 44 103 chr10 139276022 139276092 -6313196 + MLT1H LTR MaLR 1 74 -475 2346 176 25 120 chr10 139276092 139276768 -6312520 + LTR9 LTR ERV1 1 612 0 510 248 44 103 chr10 139276768 139276923 -6312365 + MLT1H LTR MaLR 74 256 -293 277 226 107 24 chr10 139277033 139277117 -6312171 + MLT1H LTR MaLR 436 526 -29 1796 204 45 36 chr10 139277890 139278384 -6310904 + MLT1D LTR MaLR 8 505 0 199 313 107 0 chr10 139278935 139279047 -6310241 + MIR SINE MIR 16 139 -123 300 204 45 98 chr10 139279461 139279593 -6309695 + MER5A DNA MER1_type 43 167 -22 * 447 211 13 72 chr10 139279476 139279628 -6309660 - MER5A DNA MER1_type -46 143 1 3130 177 62 43 chr10 139280814 139281510 -6307778 + L1MB5 LINE L1 5458 6166 -8 2099 151 0 0 chr10 139281520 139281832 -6307456 + AluSx SINE Alu 1 312 0 708 74 0 0 chr10 139281837 139281932 -6307356 + (GGAA)n Simple_repeat Simple_repeat 2 96 0 312 372 2 8 chr10 139282600 139282740 -6306548 - MIR SINE MIR -46 162 22 268 184 23 92 chr10 139282959 139283046 -6306242 - MER5A DNA MER1_type -46 143 63 245 268 26 84 chr10 139283014 139283204 -6306084 - L2 LINE L2 -173 3099 2921 * 190 266 73 73 chr10 139283752 139283944 -6305344 + L2 LINE L2 2872 3063 -209 207 225 28 28 chr10 139284321 139284392 -6304896 - L2 LINE L2 -85 3228 3158 291 91 0 45 chr10 139285007 139285051 -6304237 + MER53 DNA DNA 1 42 -147 7441 43 14 0 chr10 139285720 139286744 -6302544 - L1PA6 LINE L1 -15 6139 5112 21 0 0 0 chr10 139286829 139286850 -6302438 + AT_rich Low_complexity Low_complexity 1 21 0 262 101 32 0 chr10 139286850 139286905 -6302383 + L1MB8 LINE L1 6122 6183 -1 * 2573 277 53 20 chr10 139286901 139288782 -6300506 + L1ME3A LINE L1 3915 5732 -438 1263 218 97 55 chr10 139288782 139289162 -6300126 + MSTD LTR MaLR 1 396 0 1774 223 153 16 chr10 139289167 139289664 -6299624 + MLT1F1 LTR MaLR 1 565 -2 2573 277 53 20 chr10 139289664 139289790 -6299498 + L1ME3A LINE L1 5735 6025 -145 895 213 92 114 chr10 139289840 139290288 -6299000 + MLT1H LTR MaLR 63 549 0 352 171 49 24 chr10 139290337 139290419 -6298869 + L1ME3A LINE L1 6079 6162 -8 198 209 0 0 chr10 139290445 139290488 -6298800 + (TTTA)n Simple_repeat Simple_repeat 1 43 0 192 321 46 93 chr10 139290616 139290752 -6298536 - L2 LINE L2 -337 2977 2855 504 243 9 0 chr10 139290752 139290863 -6298425 - MER81 DNA DNA -2 112 1 192 321 46 93 chr10 139290863 139290963 -6298325 - L2 LINE L2 -459 2855 2752 439 312 107 44 chr10 139291714 139292358 -6296930 - L2 LINE L2 -38 3275 2589 23 0 0 0 chr10 139292566 139292589 -6296699 + AT_rich Low_complexity Low_complexity 1 23 0 424 301 6 43 chr10 139293068 139293231 -6296057 + MER5B DNA MER1_type 6 162 -16 711 164 8 0 chr10 139493829 139493957 -6095331 + AluSp/q SINE Alu 180 308 -5 643 295 40 5 chr10 139494812 139495012 -6094276 - MIR SINE MIR -43 219 13 314 143 16 0 chr10 139495563 139495626 -6093662 + (TG)n Simple_repeat Simple_repeat 2 65 0 376 198 19 28 chr10 139495717 139495823 -6093465 + MER112 DNA MER1_type 149 253 -7 263 224 140 28 chr10 139496639 139496746 -6092542 - L1ME4a LINE L1 -15 6106 5988 309 289 32 58 chr10 139497174 139497330 -6091958 - L1ME4a LINE L1 -37 6084 5933 343 125 54 0 chr10 139497395 139497451 -6091837 - L1MB2 LINE L1 -36 6135 6077 320 217 0 0 chr10 139499534 139499594 -6089694 - MER3 DNA MER1_type -2 207 148 2190 72 0 0 chr10 139500021 139500300 -6088988 - AluSx SINE Alu -10 302 24 27 0 0 0 chr10 139503392 139503419 -6085869 + AT_rich Low_complexity Low_complexity 1 27 0 1839 118 3 70 chr10 139503429 139503744 -6085544 - AluSx SINE Alu -18 294 1 1584 126 48 20 chr10 139503753 139504046 -6085242 - L1MA8 LINE L1 -4 6287 5987 2203 106 0 0 chr10 139504046 139504348 -6084940 - AluSx SINE Alu -3 309 8 2004 97 27 30 chr10 139504918 139505218 -6084070 - AluSg SINE Alu -11 299 1 218 310 0 0 chr10 139505602 139505660 -6083628 + L2 LINE L2 3214 3271 -1 1256 102 11 0 chr10 139505822 139505999 -6083289 + AluSg/x SINE Alu 111 289 -21 2153 114 0 0 chr10 139507871 139508169 -6081119 + AluSx SINE Alu 1 298 -14 1722 168 0 0 chr10 139508405 139508697 -6080591 - AluJo SINE Alu -10 302 11 368 209 58 0 chr10 139510300 139510386 -6078902 + MER53 DNA DNA 1 91 -98 186 325 264 15 chr10 139510392 139510589 -6078699 - L3 LINE CR1 -63 1514 1269 235 244 0 0 chr10 139510600 139510645 -6078643 - MIR3 SINE MIR -11 197 153 293 383 8 0 chr10 139510648 139510768 -6078520 - MER5A DNA MER1_type -3 186 66 2018 139 3 0 chr10 139510771 139511081 -6078207 - AluSp SINE Alu -2 311 1 267 333 13 0 chr10 139511145 139511223 -6078065 - MIR3 SINE MIR -49 159 81 529 122 17 0 chr10 139511944 139512059 -6077229 + (CA)n Simple_repeat Simple_repeat 2 118 0 255 242 16 0 chr10 139513846 139513908 -6075380 + (TATG)n Simple_repeat Simple_repeat 1 63 0 2291 80 10 0 chr10 139513917 139514218 -6075070 + AluSq SINE Alu 5 308 -5 207 0 0 0 chr10 139514350 139514373 -6074915 + (T)n Simple_repeat Simple_repeat 1 23 0 2223 123 37 20 chr10 139515096 139515446 -6073842 - MSTA LTR MaLR 0 428 73 308 330 214 0 chr10 139515500 139515612 -6073676 - L2 LINE L2 0 3272 3137 258 241 17 0 chr10 139516499 139516557 -6072731 + L2 LINE L2 3209 3267 -5 2083 104 3 3 chr10 139517492 139517789 -6071499 - AluSg SINE Alu -13 297 1 1473 189 47 19 chr10 139519109 139519426 -6069862 - L1MC1 LINE L1 -1 6332 6007 852 171 72 0 chr10 139519671 139519823 -6069465 - AluJb SINE Alu -1 311 149 1604 165 33 0 chr10 139521493 139521766 -6067522 + AluSx SINE Alu 1 282 -30 1656 141 52 4 chr10 139521785 139522093 -6067195 + AluSg SINE Alu 1 321 0 212 224 0 52 chr10 139522215 139522273 -6067015 + MER5B DNA MER1_type 1 55 -123 1531 158 4 18 chr10 139522277 139522549 -6066739 + AluJb SINE Alu 1 268 -44 1797 174 0 0 chr10 139522713 139523017 -6066271 - AluJb SINE Alu -8 304 1 302 91 0 23 chr10 139523048 139523092 -6066196 - MER3 DNA MER1_type -164 45 3 306 213 0 67 chr10 139524729 139524804 -6064484 + MER3 DNA MER1_type 35 104 -105 * 798 220 10 72 chr10 139524750 139524804 -6064484 - MER3 DNA MER1_type -5 204 148 2227 74 0 0 chr10 139524804 139525088 -6064200 + AluSx SINE Alu 1 284 -28 798 220 10 72 chr10 139525088 139525242 -6064046 - MER3 DNA MER1_type -61 148 9 252 0 0 0 chr10 139525550 139525578 -6063710 + (CAAAAA)n Simple_repeat Simple_repeat 1 28 0 240 263 0 0 chr10 139527073 139527130 -6062158 + (ATGGTG)n Simple_repeat Simple_repeat 6 62 0 523 291 36 46 chr10 139529491 139529687 -6059601 - MER91A DNA MER1_type -2 194 1 197 164 0 55 chr10 139529785 139529840 -6059448 + A-rich Low_complexity Low_complexity 1 52 0 393 218 0 0 chr10 139530331 139530455 -6058833 + (CA)n Simple_repeat Simple_repeat 1 124 0 1600 172 7 7 chr10 139532332 139532623 -6056665 + AluJb SINE Alu 1 291 -21 824 151 0 70 chr10 139533275 139533447 -6055841 + AluJb SINE Alu 137 296 -16 1692 156 4 0 chr10 139534054 139534330 -6054958 - AluSx SINE Alu -35 277 1 264 263 35 70 chr10 139534380 139534494 -6054794 - MIR3 SINE MIR -38 170 61 30 27 0 0 chr10 139535182 139535219 -6054069 + AT_rich Low_complexity Low_complexity 1 37 0 25 0 0 0 chr10 139535368 139535393 -6053895 + AT_rich Low_complexity Low_complexity 1 25 0 1336 128 128 16 chr10 139535472 139535729 -6053559 - AluSx SINE Alu -26 286 1 297 85 0 0 chr10 139536574 139536621 -6052667 - AluSx SINE Alu 0 300 254 838 129 157 20 chr10 139536621 139536768 -6052520 - AluSx SINE Alu -142 170 4 264 280 60 47 chr10 139536860 139537010 -6052278 - MIR SINE MIR -90 172 21 1033 109 0 0 chr10 139538486 139538624 -6050664 - AluSg/x SINE Alu -18 292 155 22 0 0 0 chr10 139538707 139538729 -6050559 + GC_rich Low_complexity Low_complexity 1 22 0 211 361 46 9 chr10 139539430 139539538 -6049750 + MIR3 SINE MIR 93 204 -4 628 265 75 104 chr10 139539899 139540046 -6049242 - L2 LINE L2 -13 3300 3150 429 70 0 0 chr10 139540046 139540103 -6049185 + (TCTCTG)n Simple_repeat Simple_repeat 2 58 0 628 265 75 104 chr10 139540103 139540329 -6048959 - L2 LINE L2 -163 3150 2938 311 289 20 55 chr10 139540623 139540824 -6048464 - L1M4 LINE L1 -1498 4648 4455 1702 167 0 28 chr10 139541801 139542118 -6047170 - AluJo SINE Alu -4 308 1 405 290 70 54 chr10 139542186 139542372 -6046916 + MIR SINE MIR 3 191 -71 2084 123 82 12 chr10 139543392 139543554 -6045734 - THE1B LTR MaLR 0 364 215 231 36 0 0 chr10 139543554 139543582 -6045706 + (GA)n Simple_repeat Simple_repeat 2 29 0 2084 123 82 12 chr10 139543582 139543759 -6045529 - THE1B LTR MaLR -149 215 1 1336 209 25 0 chr10 139545045 139545323 -6043965 + AluJo SINE Alu 3 287 -15 189 0 0 0 chr10 139545342 139545363 -6043925 + (TAAA)n Simple_repeat Simple_repeat 4 24 0 364 317 65 0 chr10 139545417 139545540 -6043748 - MIR SINE MIR -27 235 105 2361 108 0 9 chr10 139546008 139546323 -6042965 + AluSq SINE Alu 1 312 -1 24 32 0 0 chr10 139546606 139546637 -6042651 + AT_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr10 139547166 139547188 -6042100 + AT_rich Low_complexity Low_complexity 1 22 0 2522 67 3 0 chr10 139547273 139547571 -6041717 + AluSp SINE Alu 5 303 -10 3398 201 58 22 chr10 139550294 139550634 -6038654 - L1MB7 LINE L1 0 6184 5858 2177 96 3 30 chr10 139550634 139550937 -6038351 - AluSp SINE Alu -18 295 1 3398 201 58 22 chr10 139550937 139551383 -6037905 - L1MB7 LINE L1 -326 5858 5369 185 326 12 0 chr10 139551706 139551792 -6037496 - L3 LINE CR1 -162 1415 1329 777 254 63 28 chr10 139553269 139553521 -6035767 + MIR SINE MIR 2 262 0 2395 93 0 3 chr10 139554454 139554765 -6034523 + AluSx SINE Alu 1 310 -2 2135 104 13 23 chr10 139556011 139556319 -6032969 + AluSq SINE Alu 1 305 -8 2569 248 49 16 chr10 139557064 139557818 -6031470 - L1ME2 LINE L1 -3 6161 5383 444 274 67 17 chr10 139557977 139558156 -6031132 + MIR SINE MIR 65 252 -10 1892 148 20 3 chr10 139558216 139558519 -6030769 + AluSx SINE Alu 1 308 -4 279 266 25 13 chr10 139558837 139558916 -6030372 + CT-rich Low_complexity Low_complexity 4 83 0 1282 90 0 0 chr10 139559159 139559336 -6029952 + AluYa5 SINE Alu 128 304 -7 379 158 24 0 chr10 139559579 139559661 -6029627 + L1MB4 LINE L1 6095 6178 -2 564 278 64 86 chr10 139561067 139561581 -6027707 - MLT1J LTR MaLR -8 503 1 192 40 0 0 chr10 139562167 139562192 -6027096 + (ATG)n Simple_repeat Simple_repeat 2 26 0 1629 166 33 0 chr10 139562192 139562463 -6026825 - AluJo SINE Alu -28 284 5 356 252 8 0 chr10 139562492 139562615 -6026673 + CT-rich Low_complexity Low_complexity 1 124 0 1120 292 88 35 chr10 139564203 139565832 -6023456 - L1MEc LINE L1 -3657 2558 803 2101 136 10 0 chr10 139566919 139567229 -6022059 + AluSq SINE Alu 1 313 0 212 289 0 0 chr10 139567297 139567349 -6021939 + CT-rich Low_complexity Low_complexity 4 55 0 2307 110 0 7 chr10 139567896 139568205 -6021083 - AluSx SINE Alu -5 307 1 1402 167 23 0 chr10 139568220 139568483 -6020805 - L1MA5 LINE L1 0 6300 6032 654 108 10 20 chr10 139570164 139570266 -6019022 - AluSq SINE Alu -100 213 113 518 110 96 2 chr10 139570722 139570817 -6018471 - L1MB3 LINE L1 -25 6158 6056 207 299 26 0 chr10 139570976 139571053 -6018235 + (CATATA)n Simple_repeat Simple_repeat 2 80 0 255 329 0 0 chr10 139571134 139571219 -6018069 - L1MB3 LINE L1 -2020 5788 5704 1240 270 77 42 chr10 139572086 139572480 -6016808 - MLT1C LTR MaLR -17 450 38 2409 93 0 0 chr10 139572480 139572781 -6016507 - AluSg SINE Alu -9 301 1 1240 270 77 42 chr10 139572781 139572816 -6016472 - MLT1C LTR MaLR -429 38 6 283 276 207 0 chr10 139572948 139573093 -6016195 - MER5A DNA MER1_type -6 183 9 351 262 56 24 chr10 139574473 139574599 -6014689 - L2 LINE L2 -4 3309 3180 1059 232 49 4 chr10 139575384 139575647 -6013641 + L1M4 LINE L1 4487 4761 -1385 282 260 14 0 chr10 139575652 139575725 -6013563 - MLT1K LTR MaLR -32 556 483 2373 97 3 25 chr10 139577105 139577425 -6011863 + AluSp SINE Alu 1 313 0 185 0 0 39 chr10 139577485 139577511 -6011777 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 1116 173 10 30 chr10 139577516 139577698 -6011590 - AluJb SINE Alu -29 283 104 1847 149 155 13 chr10 139577698 139578073 -6011215 - MSTA LTR MaLR 0 428 1 1116 173 10 30 chr10 139578073 139578092 -6011196 - AluJb SINE Alu -208 104 86 2315 101 0 0 chr10 139578445 139578742 -6010546 + AluY SINE Alu 1 297 -14 2199 127 0 0 chr10 139579338 139579638 -6009650 + AluSx SINE Alu 1 300 -12 30 27 0 0 chr10 139580344 139580381 -6008907 + AT_rich Low_complexity Low_complexity 1 37 0 2006 101 67 3 chr10 139580790 139581088 -6008200 + L1PB1 LINE L1 5608 5924 -227 272 270 40 27 chr10 139581067 139581215 -6008073 - L1MEc LINE L1 -3983 2413 2264 * 406 222 0 67 chr10 139581260 139581395 -6007893 - L1ME2 LINE L1 -7 6157 6032 1851 153 3 0 chr10 139581887 139582174 -6007114 + AluSq SINE Alu 17 304 -9 21 0 0 0 chr10 139583059 139583080 -6006208 + AT_rich Low_complexity Low_complexity 1 21 0 313 243 42 62 chr10 139584065 139584209 -6005079 - L1ME1 LINE L1 -5 6161 6021 2563 95 0 40 chr10 139584579 139584958 -6004330 - THE1B LTR MaLR 0 364 1 234 247 27 14 chr10 139587530 139587603 -6001685 - L2 LINE L2 -8 3305 3232 2309 98 0 0 chr10 139587757 139588054 -6001234 + AluSc SINE Alu 1 297 -12 211 306 16 0 chr10 139588282 139588344 -6000944 - L2 LINE L2 -5 3308 3246 2197 193 57 51 chr10 139592777 139593265 -5996023 - L1MB5 LINE L1 -7 6167 5674 2495 67 0 7 chr10 139593265 139593564 -5995724 - AluY SINE Alu -14 297 1 2197 193 57 51 chr10 139593564 139593620 -5995668 - L1MB5 LINE L1 -500 5674 5620 566 289 0 0 chr10 139594304 139594453 -5994835 - MER3 DNA MER1_type -55 154 6 1446 103 20 15 chr10 139594859 139595063 -5994225 - AluSq SINE Alu -107 206 2 252 247 65 0 chr10 139595067 139595144 -5994144 + MER5C DNA MER1_type 222 303 -21 636 270 72 58 chr10 139595190 139595483 -5993805 - MLT1C LTR MaLR 0 467 171 1114 123 0 0 chr10 139595483 139595672 -5993616 - AluJb SINE Alu 0 344 156 1678 148 0 15 chr10 139595674 139595937 -5993351 - AluJb SINE Alu -53 259 1 245 273 100 18 chr10 139595939 139596049 -5993239 - MLT1C LTR MaLR -215 175 57 1002 177 87 73 chr10 139596054 139596343 -5992945 - MSTD LTR MaLR 0 396 72 928 159 0 0 chr10 139596348 139596499 -5992789 + AluJb SINE Alu 156 306 -6 318 171 0 85 chr10 139596500 139596582 -5992706 - MSTD LTR MaLR -350 78 4 270 0 0 0 chr10 139597943 139597973 -5991315 + (TG)n Simple_repeat Simple_repeat 1 30 0 2302 120 0 0 chr10 139599106 139599405 -5989883 + AluSg SINE Alu 1 299 -11 211 306 81 8 chr10 139600795 139600919 -5988369 - MIR SINE MIR -71 191 59 2239 176 26 5 chr10 139601672 139602088 -5987200 - MSTB LTR MaLR 0 426 2 308 322 27 7 chr10 139604506 139604655 -5984633 + MIR SINE MIR 77 228 -34 1873 244 101 24 chr10 139604815 139604829 -5984459 - L1ME1 LINE L1 -6 6158 6147 2109 113 3 33 chr10 139604829 139605130 -5984158 + AluSq SINE Alu 1 292 -21 1873 244 101 24 chr10 139605130 139605532 -5983756 - L1ME1 LINE L1 -17 6147 5777 2708 162 44 21 chr10 139605532 139606051 -5983237 - LTR26B LTR ERV1 0 531 1 1873 244 101 24 chr10 139606051 139606764 -5982524 - L1ME1 LINE L1 -387 5777 4934 2546 129 3 3 chr10 139607216 139607580 -5981708 + THE1B LTR MaLR 1 364 0 1858 153 0 17 chr10 139608048 139608343 -5980945 - AluJb SINE Alu -19 293 4 892 136 6 31 chr10 139609237 139609399 -5979889 - FRAM SINE Alu -5 161 4 441 283 28 7 chr10 139609870 139610015 -5979273 + MER5A DNA MER1_type 4 151 -38 2108 134 3 3 chr10 139610587 139610886 -5978402 + AluSg SINE Alu 1 299 -11 353 300 148 35 chr10 139611018 139611248 -5978040 - MIR SINE MIR 0 262 7 28 0 0 0 chr10 139611275 139611303 -5977985 + AT_rich Low_complexity Low_complexity 1 28 0 229 300 122 45 chr10 139611350 139611597 -5977691 - L1ME LINE L1 -459 5662 5397 2653 212 73 13 chr10 139611647 139612344 -5976944 - L1MB7 LINE L1 0 6184 5446 2219 124 0 0 chr10 139614294 139614592 -5974696 - AluSx SINE Alu -14 298 1 1154 176 18 5 chr10 139616077 139616298 -5972990 - MLT2B2 LTR ERVL -291 224 1 233 349 68 5 chr10 139616352 139616544 -5972744 + L2 LINE L2 3109 3312 -1 488 246 70 50 chr10 139616925 139617028 -5972260 - L1MC5 LINE L1 -40 7921 7822 2298 111 0 0 chr10 139617028 139617335 -5971953 - AluSc SINE Alu -2 307 1 488 246 70 50 chr10 139617335 139617430 -5971858 - L1MC5 LINE L1 -139 7822 7719 224 174 0 22 chr10 139619750 139619796 -5969492 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 267 246 0 0 chr10 139621095 139621156 -5968132 - MIR SINE MIR -62 146 86 2328 74 3 14 chr10 139621330 139621626 -5967662 - AluY SINE Alu -18 293 1 1271 207 88 14 chr10 139622626 139622988 -5966300 - Charlie5 DNA MER1_type 0 2622 2234 326 222 22 0 chr10 139622986 139623076 -5966212 - Charlie5 DNA MER1_type -2478 134 43 * 251 275 167 7 chr10 139623173 139623311 -5965977 - MIR SINE MIR -5 257 98 243 157 0 0 chr10 139623738 139623789 -5965499 + (TCTG)n Simple_repeat Simple_repeat 4 54 0 183 306 36 36 chr10 139624207 139624318 -5964970 - L2 LINE L2 -32 3281 3171 1669 84 0 18 chr10 139627200 139627427 -5961861 + AluY SINE Alu 89 311 0 23 0 0 0 chr10 139628239 139628262 -5961026 + AT_rich Low_complexity Low_complexity 1 23 0 2058 107 66 7 chr10 139628367 139628656 -5960632 - AluSg SINE Alu -4 306 1 875 127 0 15 chr10 139628730 139628864 -5960424 + FLAM_C SINE Alu 2 133 0 3105 78 0 0 chr10 139630654 139631063 -5958225 - L1PA8 LINE L1 -1 6171 5763 763 80 0 44 chr10 139631063 139631176 -5958112 + L1PA8 LINE L1 5681 5788 -366 2233 116 0 19 chr10 139632348 139632666 -5956622 - AluSx SINE Alu 0 312 1 25 0 0 0 chr10 139637718 139637743 -5951545 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr10 139638004 139638025 -5951263 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 139641667 139641688 -5947600 + AT_rich Low_complexity Low_complexity 1 21 0 1798 122 114 7 chr10 139643701 139643972 -5945316 + AluSg1 SINE Alu 1 300 -9 187 333 103 0 chr10 139645976 139646063 -5943225 + MIR SINE MIR 32 127 -81 265 256 103 17 chr10 139646678 139646795 -5942493 + L2 LINE L2 3138 3264 -8 2258 101 0 0 chr10 139650034 139650341 -5938947 + AluSg SINE Alu 3 309 -1 249 231 0 0 chr10 139651456 139651508 -5937780 - MIR3 SINE MIR -11 197 146 21 0 0 0 chr10 139654292 139654313 -5934975 + AT_rich Low_complexity Low_complexity 1 21 0 812 169 44 49 chr10 139654839 139655022 -5934266 - MER20 DNA MER1_type -1 218 37 908 166 46 0 chr10 139656601 139656776 -5932512 + MER58 DNA MER1_type 3 185 -2235 425 195 188 16 chr10 139656779 139656907 -5932381 + MER58 DNA MER1_type 2270 2419 -1 22 0 0 0 chr10 139657042 139657064 -5932224 + AT_rich Low_complexity Low_complexity 1 22 0 265 78 0 39 chr10 139658780 139658831 -5930457 + (TTTTC)n Simple_repeat Simple_repeat 4 52 0 2287 80 3 6 chr10 139658835 139659147 -5930141 - AluSp SINE Alu -2 311 1 489 325 77 53 chr10 139659229 139659750 -5929538 - L2 LINE L2 -6 3266 2718 196 309 18 0 chr10 139660794 139660849 -5928439 + L2 LINE L2 3201 3256 -16 249 228 50 69 chr10 139665072 139665173 -5924115 - L2 LINE L2 -24 3248 3150 292 393 18 13 chr10 139665574 139665798 -5923490 + L2 LINE L2 3086 3310 -3 237 65 0 0 chr10 139665800 139665831 -5923457 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 2275 93 3 0 chr10 139666450 139666761 -5922527 - AluSx SINE Alu 0 312 1 25 0 0 0 chr10 139668304 139668329 -5920959 + AT_rich Low_complexity Low_complexity 1 25 0 2301 85 0 0 chr10 139668336 139668643 -5920645 - AluY SINE Alu -4 307 1 372 295 171 34 chr10 139668696 139668896 -5920392 + MIR SINE MIR 19 244 -18 289 287 46 28 chr10 139670287 139670395 -5918893 - MIR SINE MIR -67 195 86 221 318 24 71 chr10 139671559 139671685 -5917603 + L2 LINE L2 3151 3270 -2 1010 199 62 0 chr10 139671793 139672004 -5917284 + MER58A DNA MER1_type 1 224 0 2233 93 0 3 chr10 139673982 139674283 -5915005 - AluSx SINE Alu -12 300 1 389 238 133 0 chr10 139674555 139674660 -5914628 - MER63 DNA MER1_type -91 745 1 645 186 199 6 chr10 139675131 139675292 -5913996 + MER3 DNA MER1_type 18 209 0 307 192 0 0 chr10 139675247 139675299 -5913989 - MER3 DNA MER1_type -117 92 41 * 21 36 0 0 chr10 139679408 139679436 -5909852 + AT_rich Low_complexity Low_complexity 1 28 0 247 337 55 30 chr10 139680118 139680265 -5909023 - MIR SINE MIR -38 170 20 837 228 47 9 chr10 139680610 139680821 -5908467 - MER20 DNA MER1_type 0 219 1 347 277 68 62 chr10 139682184 139682361 -5906927 - MIR SINE MIR -73 189 12 437 232 121 21 chr10 139682933 139683123 -5906165 + L1ME4a LINE L1 5688 5896 -225 183 129 0 0 chr10 139683440 139683471 -5905817 + (TATATG)n Simple_repeat Simple_repeat 2 32 0 225 0 0 0 chr10 139685348 139685373 -5903915 + (T)n Simple_repeat Simple_repeat 1 25 0 324 301 134 37 chr10 139687143 139687389 -5901899 - L2 LINE L2 -1 3271 3002 1941 83 4 0 chr10 139687523 139687775 -5901513 + AluSc SINE Alu 1 253 -56 974 171 122 171 chr10 139688453 139688903 -5900385 - MSTA LTR MaLR 0 428 1 395 83 17 0 chr10 139689997 139690057 -5899231 + (GAAA)n Simple_repeat Simple_repeat 3 63 0 198 0 0 0 chr10 139690057 139690079 -5899209 + (CAAG)n Simple_repeat Simple_repeat 2 23 0 318 319 0 35 chr10 139690094 139690210 -5899078 + MER5B DNA MER1_type 67 178 0 291 326 11 11 chr10 139690235 139690324 -5898964 + L2 LINE L2 3220 3308 -5 281 298 19 48 chr10 139690895 139690999 -5898289 + MIR SINE MIR 10 110 -152 526 311 63 13 chr10 139691023 139691261 -5898027 - MIR SINE MIR -10 252 3 21 36 0 0 chr10 139696008 139696036 -5893252 + AT_rich Low_complexity Low_complexity 1 28 0 26 50 0 0 chr10 139698473 139698513 -5890775 + GC_rich Low_complexity Low_complexity 1 40 0 300 439 73 73 chr10 139698844 139699240 -5890048 - L1M2 LINE L1 -5877 972 577 875 306 50 4 chr10 139701481 139701887 -5887401 + L1ME3 LINE L1 5681 6110 -60 3331 145 64 21 chr10 139702212 139702508 -5886780 - MER41C LTR ERV1 0 554 223 1660 149 76 3 chr10 139702508 139702796 -5886492 - AluSq SINE Alu -1 312 4 3331 145 64 21 chr10 139702796 139703030 -5886258 - MER41C LTR ERV1 -331 223 1 2080 141 0 0 chr10 139704136 139704435 -5884853 + AluSx SINE Alu 1 299 -13 335 214 0 45 chr10 139704890 139704979 -5884309 - MIR SINE MIR -147 115 31 2138 137 0 0 chr10 139706374 139706680 -5882608 - AluSx SINE Alu -6 306 1 2364 107 0 0 chr10 139708230 139708538 -5880750 - AluSx SINE Alu -4 308 1 253 273 31 78 chr10 139709276 139709404 -5879884 - MIR SINE MIR -34 228 107 908 232 13 52 chr10 139709733 139709966 -5879322 - MER58A DNA MER1_type 0 224 1 219 122 41 41 chr10 139713041 139713090 -5876198 + T-rich Low_complexity Low_complexity 4 52 0 627 207 37 0 chr10 139713093 139713228 -5876060 - L1MB1 LINE L1 -2 6166 6027 2208 93 0 27 chr10 139716100 139716400 -5872888 - AluY SINE Alu -19 292 1 400 344 25 8 chr10 139716648 139716892 -5872396 - L1ME3A LINE L1 -221 5949 5702 186 103 0 0 chr10 139718563 139718592 -5870696 + (A)n Simple_repeat Simple_repeat 1 29 0 212 214 18 0 chr10 139719291 139719347 -5869941 + GA-rich Low_complexity Low_complexity 2 58 0 752 216 40 44 chr10 139719982 139720209 -5869079 - L1P LINE L1 -1036 5110 4885 26 0 0 0 chr10 139720273 139720299 -5868989 + AT_rich Low_complexity Low_complexity 1 26 0 1228 219 9 42 chr10 139721065 139721399 -5867889 - L1P LINE L1 -1036 5110 4788 240 234 0 21 chr10 139721776 139721823 -5867465 - MIR SINE MIR -135 73 28 883 235 96 62 chr10 139722065 139722418 -5866870 - MLT1A1 LTR MaLR 0 365 1 1345 155 13 17 chr10 139722803 139723042 -5866246 - L1MB2 LINE L1 -2 6169 5932 690 201 98 11 chr10 139723742 139723916 -5865372 + MER53 DNA DNA 1 189 0 232 222 0 0 chr10 139724675 139724720 -5864568 + MLT1B LTR MaLR 344 388 -2 507 17 0 0 chr10 139725957 139726017 -5863271 + (TTGTG)n Simple_repeat Simple_repeat 1 60 0 1594 191 0 38 chr10 139726017 139726310 -5862978 - AluJo SINE Alu -30 282 1 375 229 189 39 chr10 139726323 139726476 -5862812 - L1MC3 LINE L1 -1 7757 6168 1496 145 35 0 chr10 139726766 139726993 -5862295 + MER46A DNA MER2_type 1 235 -1 2064 138 10 3 chr10 139727612 139727909 -5861379 + AluSx SINE Alu 1 299 -13 938 201 0 0 chr10 139727911 139728075 -5861213 + AluJo/FRAM SINE Alu 141 304 -8 30 0 0 0 chr10 139728114 139728144 -5861144 + AT_rich Low_complexity Low_complexity 1 30 0 2182 106 0 10 chr10 139729130 139729433 -5859855 + AluSg SINE Alu 1 300 -10 1982 129 3 3 chr10 139729797 139730083 -5859205 + AluSx SINE Alu 1 286 -26 210 37 0 0 chr10 139730086 139730113 -5859175 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 235 333 38 9 chr10 139730310 139730415 -5858873 + L2 LINE L2 3165 3272 0 5268 157 22 80 chr10 139732119 139732285 -5857003 - L1MA8 LINE L1 0 6291 6117 2134 84 38 7 chr10 139732285 139732572 -5856716 + AluSx SINE Alu 1 296 -16 5268 157 22 80 chr10 139732572 139734403 -5854885 - L1MA8 LINE L1 -174 6117 4386 922 170 85 0 chr10 139734739 139734904 -5854384 - AluJb SINE Alu 0 312 134 321 203 51 13 chr10 139735247 139735326 -5853962 - L2 LINE L2 -60 3253 3172 222 261 76 22 chr10 139735372 139735464 -5853824 - L2 LINE L2 -304 3009 2913 463 287 59 29 chr10 139737781 139738088 -5851200 + L1M4 LINE L1 4442 4757 -1389 2197 100 0 3 chr10 139738189 139738480 -5850808 + AluSq SINE Alu 20 309 -4 338 264 119 38 chr10 139738981 139739140 -5850148 - L1MC4 LINE L1 -6 8036 7865 501 301 27 48 chr10 139739427 139739819 -5849469 - L1MC4 LINE L1 -579 7229 6838 21 100 0 0 chr10 139740473 139740543 -5848745 + AT_rich Low_complexity Low_complexity 1 70 0 21 36 0 0 chr10 139741002 139741030 -5848258 + AT_rich Low_complexity Low_complexity 1 28 0 2014 106 21 3 chr10 139742132 139742414 -5846874 + AluSx SINE Alu 1 287 -25 266 254 30 75 chr10 139742610 139742744 -5846544 - HAL1 LINE L1 -1744 763 636 226 251 124 54 chr10 139743034 139743293 -5845995 - HAL1 LINE L1 -2171 336 60 717 272 121 60 chr10 139745096 139745183 -5844105 - L1ME4a LINE L1 -265 5856 5776 740 166 52 78 chr10 139745183 139745376 -5843912 + MER53 DNA DNA 2 189 0 717 272 121 60 chr10 139745376 139745751 -5843537 - L1ME4a LINE L1 -345 5776 5366 196 246 217 0 chr10 139747343 139747412 -5841876 + MIR SINE MIR 60 143 -119 2085 109 0 3 chr10 139749894 139750178 -5839110 + MER1B DNA MER1_type 57 339 0 267 225 0 0 chr10 139750447 139750518 -5838770 + (TA)n Simple_repeat Simple_repeat 1 71 0 446 247 6 0 chr10 139750625 139750787 -5838501 + (TG)n Simple_repeat Simple_repeat 2 164 0 270 256 0 0 chr10 139750800 139750921 -5838367 + (TG)n Simple_repeat Simple_repeat 2 122 0 483 244 0 0 chr10 139750934 139751102 -5838186 + (TG)n Simple_repeat Simple_repeat 1 168 0 248 231 0 0 chr10 139751116 139751168 -5838120 + (TG)n Simple_repeat Simple_repeat 1 52 0 367 317 38 21 chr10 139751648 139751888 -5837400 - MIR SINE MIR -17 245 2 1898 148 0 26 chr10 139753538 139753842 -5835446 - AluJo SINE Alu -16 296 1 25 0 0 0 chr10 139755203 139755228 -5834060 + AT_rich Low_complexity Low_complexity 1 25 0 243 0 0 0 chr10 139755355 139755382 -5833906 + (CA)n Simple_repeat Simple_repeat 2 28 0 2281 68 0 52 chr10 139755493 139755800 -5833488 - AluSp SINE Alu -22 291 1 7807 20 0 0 chr10 139755905 139757409 -5831879 - L1PA3 LINE L1 -3 6152 4653 653 180 101 7 chr10 139757871 139758010 -5831278 - MER21B LTR ERV1 -58 805 654 2053 156 0 3 chr10 139758113 139758420 -5830868 + AluJo SINE Alu 1 306 -6 229 271 6 105 chr10 139758688 139758869 -5830419 - L1MC4 LINE L1 -388 7654 7492 372 296 13 83 chr10 139758929 139759281 -5830007 - L1MC4 LINE L1 -417 7391 7083 1642 160 8 8 chr10 139759639 139759902 -5829386 + AluJo SINE Alu 1 263 -49 22 0 0 0 chr10 139759909 139759931 -5829357 + AT_rich Low_complexity Low_complexity 1 22 0 261 164 98 0 chr10 139762556 139762617 -5826671 - L1MD2 LINE L1 -16 6343 6277 898 255 52 11 chr10 139762619 139762890 -5826398 - L1MD2 LINE L1 -144 6215 5934 2012 105 38 110 chr10 139763867 139764259 -5825029 - THE1B LTR MaLR 0 364 1 1836 146 14 3 chr10 139764795 139765089 -5824199 + AluSx SINE Alu 1 297 -15 390 379 48 10 chr10 139765552 139765866 -5823422 - L2 LINE L2 -553 2761 2436 706 183 20 33 chr10 139766026 139766179 -5823109 - MER106B DNA MER1_type -908 151 1 203 327 166 32 chr10 139766184 139767053 -5822235 - L2 LINE L2 -972 2342 1358 2120 114 0 17 chr10 139768670 139768967 -5820321 + AluSx SINE Alu 1 292 -20 440 273 74 11 chr10 139770478 139770654 -5818634 - MIR SINE MIR -55 207 21 30 27 0 0 chr10 139771187 139771224 -5818064 + AT_rich Low_complexity Low_complexity 1 37 0 2678 24 0 0 chr10 139771224 139771520 -5817768 - AluY SINE Alu -15 296 1 216 0 0 0 chr10 139771921 139771945 -5817343 + (CA)n Simple_repeat Simple_repeat 1 24 0 869 268 26 0 chr10 139773408 139773602 -5815686 + MER20 DNA MER1_type 4 202 -17 1909 107 69 28 chr10 139773679 139773970 -5815318 + AluSg SINE Alu 7 309 -1 368 324 66 33 chr10 139774452 139774665 -5814623 + MIR SINE MIR 8 227 -35 204 97 0 0 chr10 139825044 139825075 -5764213 + (TCTCC)n Simple_repeat Simple_repeat 5 35 0 647 159 0 19 chr10 139825078 139825185 -5764103 - FLAM_A SINE Alu -34 108 4 317 206 14 0 chr10 139825234 139825307 -5763981 + L1MA10 LINE L1 6260 6333 -1 2077 218 36 6 chr10 139825309 139825837 -5763451 - L1MEc LINE L1 -3906 2311 1768 227 182 15 76 chr10 139826977 139827043 -5762245 - MIR3 SINE MIR -8 200 139 29 60 0 0 chr10 139827928 139827978 -5761310 + AT_rich Low_complexity Low_complexity 1 50 0 654 287 0 0 chr10 139828261 139828411 -5760877 + FRAM SINE Alu 1 150 -16 1902 140 0 18 chr10 139828506 139828791 -5760497 + AluJb SINE Alu 1 280 -32 450 220 128 46 chr10 139829819 139830037 -5759251 - L1MEc LINE L1 -4640 1756 1521 896 235 126 58 chr10 139830194 139830519 -5758769 - L1MC5 LINE L1 -100 7861 7560 1972 111 20 93 chr10 139830519 139830862 -5758426 - AluYb8 SINE Alu 0 318 1 1761 159 46 7 chr10 139830862 139831145 -5758143 - AluJo SINE Alu -18 294 1 896 235 126 58 chr10 139831145 139831473 -5757815 - L1MC5 LINE L1 -400 7561 7254 1763 223 43 57 chr10 139831507 139832136 -5757152 - L1MC5 LINE L1 -731 7230 6611 25 31 0 0 chr10 139832350 139832382 -5756906 + AT_rich Low_complexity Low_complexity 1 32 0 297 0 0 0 chr10 139832430 139832463 -5756825 + (CA)n Simple_repeat Simple_repeat 2 34 0 1044 293 44 33 chr10 139833038 139833495 -5755793 - L1MC5 LINE L1 -1923 5885 5424 357 257 45 51 chr10 139833549 139833841 -5755447 - L1MEc LINE L1 -5071 1325 1036 2148 199 51 12 chr10 139834217 139834797 -5754491 - L1MD2 LINE L1 -2 6357 5591 2191 132 0 0 chr10 139838117 139838427 -5750861 - AluSq SINE Alu -3 310 1 2090 117 28 3 chr10 139838456 139838747 -5750541 - AluSx SINE Alu -14 298 1 519 133 0 97 chr10 139838804 139838897 -5750391 + AluJ SINE Alu 24 106 -206 2386 170 22 7 chr10 139838897 139839314 -5749974 - MSTB LTR MaLR -2 424 2 519 133 0 97 chr10 139839314 139839333 -5749955 + AluJ SINE Alu 106 125 -187 727 244 32 0 chr10 139839349 139839505 -5749783 + AluJ SINE Alu 141 301 -1 252 252 17 67 chr10 139839822 139839941 -5749347 + MIR3 SINE MIR 81 193 -15 1554 226 64 44 chr10 139842766 139842908 -5746380 + MLT1C LTR MaLR 1 139 -328 2138 116 0 17 chr10 139842908 139843209 -5746079 - AluSx SINE Alu -16 296 1 1554 226 64 44 chr10 139843209 139843522 -5745766 + MLT1C LTR MaLR 139 465 -2 2387 101 0 0 chr10 139845469 139845776 -5743512 + AluSx SINE Alu 1 307 -5 414 0 0 0 chr10 139846547 139846593 -5742695 + (TG)n Simple_repeat Simple_repeat 2 47 0 1708 186 120 24 chr10 139846838 139847263 -5742025 - MER31B LTR ERV1 0 466 1 284 119 0 24 chr10 139847350 139847392 -5741896 + Alu SINE Alu 1 41 -267 1707 178 7 7 chr10 139847392 139847673 -5741615 + AluJb SINE Alu 11 291 -21 1923 172 13 0 chr10 139848409 139848717 -5740571 + AluJo SINE Alu 1 312 0 2332 109 0 6 chr10 139849807 139850120 -5739168 - AluSx SINE Alu -1 311 1 6720 88 19 4 chr10 139852222 139853535 -5735753 - L1PA8 LINE L1 0 6172 4854 2114 124 3 0 chr10 139853681 139853980 -5735308 - AluSx SINE Alu -12 300 1 438 273 169 0 chr10 139854879 139855033 -5734255 - MER5A DNA MER1_type 0 189 10 894 166 40 7 chr10 139855212 139855363 -5733925 - MER46A DNA MER2_type -79 157 2 806 158 104 68 chr10 139855363 139855447 -5733841 + MER46A DNA MER2_type 145 236 0 1658 97 0 0 chr10 139855658 139855885 -5733403 - AluSg/x SINE Alu 0 310 84 249 108 0 0 chr10 139856612 139856649 -5732639 + (TCCC)n Simple_repeat Simple_repeat 1 37 0 2153 168 8 3 chr10 139859073 139859436 -5729852 + MLT1B LTR MaLR 25 389 -1 1906 95 18 4 chr10 139859531 139859804 -5729484 - AluSx SINE Alu -35 277 1 1173 204 37 27 chr10 139859839 139860138 -5729150 - L1MA9 LINE L1 -30 6282 5981 495 277 43 87 chr10 139862491 139862791 -5726497 - L2 LINE L2 -38 3275 2989 462 142 19 19 chr10 139865014 139865120 -5724168 + C-rich Low_complexity Low_complexity 3 108 0 1648 155 3 20 chr10 139865626 139865929 -5723359 + AluSx SINE Alu 1 298 -14 1960 149 3 0 chr10 139866122 139866423 -5722865 - AluSx SINE Alu -10 302 1 1241 229 26 52 chr10 139866446 139866795 -5722493 + MER58B DNA MER1_type 1 340 -1 260 292 54 5 chr10 139867570 139867708 -5721580 + MIR SINE MIR 30 174 -34 512 266 110 46 chr10 139869299 139869517 -5719771 - MIR SINE MIR -24 238 7 11451 118 15 4 chr10 139869800 139871519 -5717769 - Tigger1 DNA MER2_type -14 2404 667 217 280 27 18 chr10 139871704 139871798 -5717490 - MIR SINE MIR -54 154 64 207 0 0 0 chr10 139872054 139872077 -5717211 + (A)n Simple_repeat Simple_repeat 1 23 0 32 0 0 0 chr10 139872862 139872894 -5716394 + AT_rich Low_complexity Low_complexity 1 32 0 598 214 126 0 chr10 139872914 139873073 -5716215 - L1MB4 LINE L1 -14 6166 5988 300 286 33 0 chr10 139874218 139874309 -5714979 - MER58 DNA MER1_type -2154 266 173 2001 140 6 52 chr10 139874310 139874522 -5714766 + L1M3 LINE L1 5444 5633 -550 3208 173 17 92 chr10 139874522 139875205 -5714083 - MER72 LTR ERV1 -2 720 102 2197 103 3 0 chr10 139875205 139875516 -5713772 - AluSq SINE Alu -1 312 1 3208 173 17 92 chr10 139875516 139875611 -5713677 - MER72 LTR ERV1 -620 102 1 2001 140 6 52 chr10 139875611 139875762 -5713526 + L1M3 LINE L1 5633 5790 -393 333 296 80 8 chr10 139875768 139875893 -5713395 + MIR SINE MIR 117 250 -12 709 190 7 0 chr10 139878064 139878206 -5711082 - L1MA7 LINE L1 0 6291 6149 209 219 0 0 chr10 139879072 139879113 -5710175 + (TTCA)n Simple_repeat Simple_repeat 3 43 0 300 315 19 37 chr10 139879114 139879222 -5710066 - L2 LINE L2 0 3272 3167 1889 76 4 23 chr10 139879571 139879734 -5709554 - AluSx SINE Alu -16 296 138 2309 80 0 7 chr10 139879734 139880035 -5709253 - AluY SINE Alu -12 299 1 1889 76 4 23 chr10 139880035 139880133 -5709155 - AluSx SINE Alu -174 138 40 2355 79 3 0 chr10 139880555 139880858 -5708430 - AluY SINE Alu -7 304 1 313 65 130 0 chr10 139881617 139881663 -5707625 - MER53 DNA DNA -137 52 1 362 174 16 16 chr10 139883709 139883830 -5705458 + (TG)n Simple_repeat Simple_repeat 1 121 0 26 0 0 0 chr10 139884156 139884182 -5705106 + AT_rich Low_complexity Low_complexity 1 26 0 348 349 7 0 chr10 139884532 139884681 -5704607 - L1MB4 LINE L1 -1993 5815 5666 563 111 0 24 chr10 139884842 139885096 -5704192 + AluJb SINE Alu 19 312 0 433 275 85 32 chr10 139885443 139885632 -5703656 + MIR SINE MIR 41 239 -23 2245 95 3 0 chr10 139885957 139886261 -5703027 - AluSc SINE Alu -4 305 1 365 136 15 0 chr10 139886392 139886458 -5702830 + CT-rich Low_complexity Low_complexity 1 67 0 23 0 0 0 chr10 139886499 139886522 -5702766 + AT_rich Low_complexity Low_complexity 1 23 0 343 311 61 0 chr10 139886739 139886935 -5702353 - L1ME LINE L1 -339 5782 5575 247 256 49 49 chr10 139894181 139894263 -5695025 - L2 LINE L2 -44 3269 3188 318 288 165 12 chr10 139895330 139895500 -5693788 - L1ME LINE L1 -706 5456 5261 312 290 196 25 chr10 139895675 139896079 -5693209 - L1ME LINE L1 -1111 5035 4563 381 162 0 0 chr10 139896644 139896712 -5692576 + (TTG)n Simple_repeat Simple_repeat 2 69 0 277 286 193 31 chr10 139896958 139897150 -5692138 + MIR SINE MIR 28 250 -12 201 229 0 0 chr10 139897292 139897327 -5691961 - MIR SINE MIR -111 151 117 2159 110 0 0 chr10 139897551 139897842 -5691446 + AluSx SINE Alu 1 291 -21 671 306 97 5 chr10 139897843 139898059 -5691229 - MIR SINE MIR -6 256 21 866 171 19 0 chr10 139899326 139899484 -5689804 + FAM SINE Alu 1 48 -1 1375 168 39 56 chr10 139899509 139899794 -5689494 + MER7A DNA MER2_type 66 343 -3 450 323 53 13 chr10 139899810 139900036 -5689252 - MIR SINE MIR -12 250 16 1895 143 0 10 chr10 139900906 139901213 -5688075 + AluJo SINE Alu 6 309 -3 570 15 0 0 chr10 139902421 139902488 -5686800 + (TTCCC)n Simple_repeat Simple_repeat 1 67 0 180 0 0 0 chr10 139903236 139903256 -5686032 + (TTTTTG)n Simple_repeat Simple_repeat 2 21 0 1862 194 39 35 chr10 139904179 139904639 -5684649 - MLT1C LTR MaLR -2 465 4 304 284 47 0 chr10 139904675 139904802 -5684486 - MER112 DNA MER1_type -91 169 37 332 333 47 16 chr10 139904975 139905104 -5684184 + L2 LINE L2 2922 3054 -259 197 171 122 0 chr10 139905351 139905392 -5683896 + L2 LINE L2 3264 3309 -4 268 133 0 0 chr10 139905560 139905605 -5683683 - MIR SINE MIR -125 137 93 207 281 98 59 chr10 139905875 139906028 -5683260 + MIR SINE MIR 58 216 -46 370 200 0 34 chr10 139906744 139906919 -5682369 + G-rich Low_complexity Low_complexity 1 169 0 2344 99 0 0 chr10 139907187 139907481 -5681807 - AluSx SINE Alu -18 294 1 267 298 36 12 chr10 139910920 139911004 -5678284 + MIR3 SINE MIR 120 205 -3 25 0 0 0 chr10 139912583 139912608 -5676680 + AT_rich Low_complexity Low_complexity 1 25 0 291 312 113 28 chr10 139915398 139915539 -5673749 + MIR SINE MIR 47 199 -63 2518 71 0 3 chr10 139915692 139916002 -5673286 - AluY SINE Alu -2 309 1 899 213 100 72 chr10 139917414 139917814 -5671474 + MLT1C LTR MaLR 52 462 -5 700 178 150 66 chr10 139918604 139918817 -5670471 + L1MCa LINE L1 28 258 -6168 1332 218 71 0 chr10 139918818 139919158 -5670130 + L1MCa LINE L1 778 1141 -5285 26 0 0 0 chr10 139920256 139920282 -5669006 + AT_rich Low_complexity Low_complexity 1 26 0 2254 105 20 0 chr10 139920437 139920741 -5668547 + AluSx SINE Alu 3 312 0 686 228 64 30 chr10 139922238 139922440 -5666848 + MER3 DNA MER1_type 1 209 0 22 0 0 0 chr10 139922970 139922992 -5666296 + AT_rich Low_complexity Low_complexity 1 22 0 190 286 78 26 chr10 139923478 139923555 -5665733 - L2 LINE L2 -1884 1430 1350 369 0 0 0 chr10 139924778 139924819 -5664469 + (TGGA)n Simple_repeat Simple_repeat 4 44 0 402 187 22 11 chr10 139926724 139926815 -5662473 - AluJ/FRAM SINE Alu -1 311 220 183 243 0 0 chr10 139926900 139926937 -5662351 + L2 LINE L2 3228 3264 -8 * 195 304 88 29 chr10 139926911 139927013 -5662275 - L3 LINE CR1 -667 910 803 181 387 11 0 chr10 139927203 139927296 -5661992 - L3 LINE CR1 -896 681 588 1180 255 74 19 chr10 139928425 139928856 -5660432 - MLT1C LTR MaLR -10 457 3 3598 127 6 6 chr10 139929134 139929660 -5659628 + MER1A DNA MER1_type 2 527 0 198 0 0 0 chr10 139929851 139929873 -5659415 + (CAGGG)n Simple_repeat Simple_repeat 3 24 0 191 270 130 0 chr10 139930000 139930100 -5659188 + L2 LINE L2 2818 2930 -342 441 350 25 35 chr10 139930367 139930570 -5658718 + L2 LINE L2 3112 3312 -1 258 217 54 22 chr10 139930843 139930935 -5658353 + MER20 DNA MER1_type 124 218 -1 272 222 136 3 chr10 139931545 139931633 -5657655 - MLT1I LTR MaLR -243 166 81 1674 153 114 17 chr10 139932376 139932553 -5656735 + MSTA LTR MaLR 1 159 -206 2217 92 27 3 chr10 139932553 139932845 -5656443 + AluSq SINE Alu 1 299 -14 1674 153 114 17 chr10 139932845 139933046 -5656242 + MSTA LTR MaLR 159 356 -9 423 192 135 82 chr10 139933156 139933189 -5656099 + Charlie5 DNA MER1_type 2406 2436 -188 2352 144 10 15 chr10 139933189 139933578 -5655710 + MLT1B LTR MaLR 3 389 -1 423 192 135 82 chr10 139933578 139933752 -5655536 + Charlie5 DNA MER1_type 2436 2624 0 471 233 187 13 chr10 139934996 139935146 -5654142 - MER5A DNA MER1_type -5 184 9 444 202 50 0 chr10 139935258 139935357 -5653931 - L1MC1 LINE L1 0 6333 6230 195 328 35 26 chr10 139937775 139937891 -5651397 - L2 LINE L2 -212 3060 2944 1625 204 25 17 chr10 139937972 139938334 -5650954 - MLT1A1 LTR MaLR 0 365 1 704 276 102 0 chr10 139939113 139939388 -5649900 + L2 LINE L2 1543 1845 -1469 462 267 75 12 chr10 139943318 139943479 -5645809 + MIR SINE MIR 18 188 -74 1371 165 69 21 chr10 139943525 139944079 -5645209 + LTR8A LTR ERV1 3 634 -93 1585 168 18 4 chr10 139944081 139944355 -5644933 - MER50 LTR ERV1 -23 711 434 * 1694 151 39 3 chr10 139944347 139944652 -5644636 - MER50 LTR ERV1 -418 316 1 469 149 0 0 chr10 139944652 139944726 -5644562 + LTR8A LTR ERV1 632 705 -22 205 246 105 118 chr10 139944904 139945132 -5644156 - L2 LINE L2 -20 3252 3028 2265 102 0 0 chr10 139946297 139946592 -5642696 + AluY SINE Alu 1 295 -16 2321 198 38 6 chr10 139947488 139947968 -5641320 - L1MB3 LINE L1 0 6183 5689 1787 160 83 3 chr10 139950005 139950343 -5638945 - MLT1A1 LTR MaLR 0 365 1 617 197 111 67 chr10 139954219 139954378 -5634910 - MER20 DNA MER1_type 0 219 47 2113 120 10 0 chr10 139954378 139954669 -5634619 + AluSq SINE Alu 1 294 -19 617 197 111 67 chr10 139954669 139954717 -5634571 - MER20 DNA MER1_type -172 47 3 2591 71 0 0 chr10 139954770 139955081 -5634207 - AluY SINE Alu 0 311 1 405 127 51 0 chr10 139955134 139955213 -5634075 - FLAM_C SINE Alu 0 143 61 183 356 56 0 chr10 139955999 139956089 -5633199 - MIR SINE MIR -75 133 39 2039 141 0 0 chr10 139956737 139957021 -5632267 - AluSx SINE Alu -18 294 11 2082 137 20 0 chr10 139960395 139960695 -5628593 - AluSx SINE Alu -6 306 1 735 201 5 98 chr10 139961819 139962023 -5627265 + MER58A DNA MER1_type 40 224 0 204 229 171 43 chr10 139962379 139962449 -5626839 + L2 LINE L2 3225 3303 -10 1292 87 23 0 chr10 139963499 139963672 -5625616 + AluSg/x SINE Alu 122 298 -14 303 28 0 0 chr10 139963717 139963753 -5625535 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 1988 132 14 7 chr10 139963755 139964035 -5625253 - AluSx SINE Alu -30 282 1 22 66 0 16 chr10 139964243 139964271 -5625017 + AT_rich Low_complexity Low_complexity 1 28 -32 3433 174 11 37 chr10 139964271 139964979 -5624309 - L1MB3 LINE L1 -6 6177 5489 2619 69 0 0 chr10 139964979 139965285 -5624003 - AluSc SINE Alu -3 306 1 3433 174 11 37 chr10 139965285 139965334 -5623954 - L1MB3 LINE L1 -694 5489 5440 22 66 0 16 chr10 139965334 139965366 -5623922 + AT_rich Low_complexity Low_complexity 28 60 0 191 264 38 0 chr10 139966685 139966738 -5622550 + MIR SINE MIR 65 119 -89 262 253 93 13 chr10 139966743 139966818 -5622470 + MER5A DNA MER1_type 51 131 -58 679 292 68 17 chr10 139970239 139970475 -5618813 - MIR SINE MIR -3 259 12 210 225 7 70 chr10 139971195 139971337 -5617951 + (GTGTG)n Simple_repeat Simple_repeat 1 133 0 324 199 11 90 chr10 139971361 139971721 -5617567 + (GTGTG)n Simple_repeat Simple_repeat 1 331 0 21 0 0 0 chr10 139972325 139972346 -5616942 + AT_rich Low_complexity Low_complexity 1 21 0 194 370 95 5 chr10 139973820 139974009 -5615279 - MIR SINE MIR -54 208 3 703 222 104 47 chr10 139974479 139974662 -5614626 + MER58A DNA MER1_type 1 199 -2221 2196 127 15 0 chr10 139974662 139974994 -5614294 + MER1B DNA MER1_type 1 337 0 703 222 104 47 chr10 139974994 139975022 -5614266 + MER58A DNA MER1_type 199 224 0 1594 72 8 34 chr10 139976540 139976776 -5612512 - MER30 DNA MER1_type 0 230 1 643 152 0 0 chr10 139977162 139977261 -5612027 - AluJb SINE Alu -20 292 194 841 180 4 8 chr10 139977262 139977444 -5611844 - L1MB3 LINE L1 -37 6137 5954 265 209 9 86 chr10 139977416 139977473 -5611815 - L1MB3 LINE L1 -162 6021 5974 * 2389 87 3 0 chr10 139977473 139977772 -5611516 - AluY SINE Alu -11 300 1 265 209 9 86 chr10 139977772 139977819 -5611469 - L1MB3 LINE L1 -209 5974 5925 1958 168 0 7 chr10 139979055 139979352 -5609936 + AluJb SINE Alu 1 295 -17 1139 217 82 84 chr10 139979591 139980199 -5609089 - L1MC5 LINE L1 -184 7777 7171 1919 162 10 0 chr10 139980421 139980711 -5608577 - AluJb SINE Alu -19 293 1 368 248 68 59 chr10 139981606 139981828 -5607460 - L1MC5 LINE L1 -225 7736 7513 218 205 0 0 chr10 139982031 139982070 -5607218 + GA-rich Low_complexity Low_complexity 1 39 0 1764 198 57 41 chr10 139982886 139983305 -5605983 - MSTB LTR MaLR 0 426 1 1146 201 108 11 chr10 139985891 139986170 -5603118 - MLT1C LTR MaLR -14 453 148 455 240 19 39 chr10 139986304 139986458 -5602830 - TAR1 Satellite telomeric -1927 184 34 * 2269 203 20 34 chr10 139986330 139986887 -5602401 - LTR60 LTR ERV1 -37 549 1 671 200 15 7 chr10 139986887 139987022 -5602266 - MLT1C LTR MaLR -254 136 1 1428 228 70 34 chr10 139987656 139988069 -5601219 - MLT1C LTR MaLR -34 433 6 2650 209 31 32 chr10 139988507 139988913 -5600375 + L1MB4 LINE L1 5562 5968 -212 2362 97 3 0 chr10 139988913 139989212 -5600076 + AluSx SINE Alu 13 312 0 2650 209 31 32 chr10 139989212 139989421 -5599867 + L1MB4 LINE L1 5968 6176 -4 23 54 0 0 chr10 139991735 139991772 -5597516 + AT_rich Low_complexity Low_complexity 1 37 0 324 244 0 0 chr10 139993383 139993473 -5595815 + (TTCA)n Simple_repeat Simple_repeat 3 92 0 858 248 9 33 chr10 139993667 139993877 -5595411 + MER58A DNA MER1_type 20 224 0 207 0 0 0 chr10 139995238 139995261 -5594027 + (CA)n Simple_repeat Simple_repeat 2 24 0 2074 91 36 4 chr10 139996320 139996594 -5592694 + AluSq SINE Alu 1 283 -30 89 34 0 0 chr10 139996610 139996727 -5592561 + AT_rich Low_complexity Low_complexity 1 117 0 388 233 12 74 chr10 139997212 139997375 -5591913 - MER106B DNA MER1_type 0 1059 907 1839 172 38 6 chr10 139998295 139998638 -5590650 + MLT2C1 LTR ERVL 3 356 -41 314 98 20 0 chr10 139998914 139998965 -5590323 + (TC)n Simple_repeat Simple_repeat 1 52 0 1118 210 56 49 chr10 139999523 139999575 -5589713 + L1MC4 LINE L1 6780 6830 -1212 1954 60 0 13 chr10 139999575 139999809 -5589479 + AluY SINE Alu 80 310 -1 1118 210 56 49 chr10 139999809 140000380 -5588908 + L1MC4 LINE L1 6830 7549 -493 1163 195 58 15 chr10 140000385 140000646 -5588642 + L1MB7 LINE L1 5908 6179 -5 729 296 118 0 chr10 140000653 140000957 -5588331 + L1MC4 LINE L1 7545 7884 -158 3357 121 32 45 chr10 140001869 140002601 -5586687 - LTR12 LTR ERV1 -119 2319 76 269 231 0 0 chr10 140002601 140002653 -5586635 - LTR30 LTR ERV1 -670 52 1 7748 24 0 0 chr10 140004175 140005584 -5583704 + L1PA4 LINE L1 4729 6137 -18 249 32 0 0 chr10 140005584 140005615 -5583673 + L1P LINE L1 4729 6168 -743 199 228 65 98 chr10 140008002 140008125 -5581163 - L2 LINE L2 -2835 479 361 322 170 18 45 chr10 140008328 140008440 -5580848 + GA-rich Low_complexity Low_complexity 2 110 0 2406 94 0 0 chr10 140008888 140009185 -5580103 - AluSg SINE Alu -13 297 1 289 231 19 77 chr10 140009503 140009607 -5579681 + MIR SINE MIR 13 110 -152 246 282 84 63 chr10 140009706 140009848 -5579440 + MLT1K LTR MaLR 164 308 -280 421 245 53 85 chr10 140009969 140010251 -5579037 - MLT1I LTR MaLR -29 380 108 896 228 0 8 chr10 140010425 140010671 -5578617 - L1M4 LINE L1 -2818 3328 3085 237 250 25 12 chr10 140012025 140012105 -5577183 + (TG)n Simple_repeat Simple_repeat 2 82 0 2391 92 0 3 chr10 140012931 140013235 -5576053 - AluSc SINE Alu -6 303 1 1113 68 0 0 chr10 140013235 140013368 -5575920 - AluSc SINE Alu -176 133 1 205 231 26 39 chr10 140015410 140015488 -5573800 + GA-rich Low_complexity Low_complexity 3 79 0 1718 236 135 48 chr10 140016189 140016795 -5572493 + MLT2F LTR ERVL 5 663 0 411 268 19 2 chr10 140016798 140016930 -5572358 + MLT-int LTR MaLR 4 136 -1235 810 173 0 27 chr10 140017001 140017151 -5572137 - Ricksha DNA DNA -532 2714 2569 803 246 50 50 chr10 140017151 140017448 -5571840 + MLT1F1-int LTR MaLR 305 601 -770 449 266 60 143 chr10 140017642 140018375 -5570913 + MLT1F1-int LTR MaLR 700 1371 0 2810 227 3 3 chr10 140018375 140018939 -5570349 + MLT1F1 LTR MaLR 1 564 -3 26 30 0 0 chr10 140019633 140019666 -5569622 + AT_rich Low_complexity Low_complexity 1 33 0 2899 136 53 0 chr10 140019760 140020268 -5569020 - L1MA8 LINE L1 -3 6288 5754 225 178 0 0 chr10 140020286 140020331 -5568957 - L1MB4 LINE L1 0 6180 6136 4553 68 7 0 chr10 140020339 140020917 -5568371 - L1PA8 LINE L1 -13 6159 5578 3017 148 12 7 chr10 140020922 140021550 -5567738 - L1MA8 LINE L1 -527 5764 5129 1413 201 49 15 chr10 140021550 140021878 -5567410 - MER44D DNA MER2_type 0 609 1 3017 148 12 7 chr10 140021878 140022138 -5567150 - L1MA8 LINE L1 -1162 5129 4872 23 0 0 0 chr10 140022266 140022289 -5566999 + AT_rich Low_complexity Low_complexity 1 23 0 297 247 11 0 chr10 140022344 140022433 -5566855 + (TA)n Simple_repeat Simple_repeat 1 90 0 382 321 84 48 chr10 140022439 140022750 -5566538 + L2 LINE L2 2945 3266 -6 561 152 11 0 chr10 140023171 140023263 -5566025 - L1MC1 LINE L1 0 6333 6241 209 293 40 40 chr10 140025681 140025756 -5563532 + L2 LINE L2 2223 2297 -1017 290 161 62 0 chr10 140025827 140025908 -5563380 + LTR33 LTR ERVL 37 122 -399 183 301 132 44 chr10 140026306 140026442 -5562846 + L2 LINE L2 2577 2724 -590 187 273 143 57 chr10 140026496 140026705 -5562583 + L2 LINE L2 2825 3051 -221 227 271 29 0 chr10 140026793 140026863 -5562425 - MIR SINE MIR -28 234 163 592 262 109 0 chr10 140026911 140027113 -5562175 - MER58A DNA MER1_type 0 224 1 323 279 201 12 chr10 140029425 140029669 -5559619 + LTR16A LTR ERVL 157 446 -4 370 317 19 6 chr10 140029669 140029830 -5559458 - L1ME LINE L1 -313 5808 5646 6134 189 75 12 chr10 140029844 140030074 -5559214 + Charlie1a DNA MER1_type 8 222 -2539 2030 148 0 3 chr10 140030074 140030372 -5558916 + AluSx SINE Alu 1 297 -15 6134 189 75 12 chr10 140030372 140031504 -5557784 + Charlie1a DNA MER1_type 222 1455 0 846 120 0 24 chr10 140031962 140032087 -5557201 - AluSg/x SINE Alu -15 295 174 319 162 22 1 chr10 140032608 140032739 -5556549 - L1ME LINE L1 -348 5773 5659 2745 13 3 19 chr10 140032752 140033064 -5556224 + AluYa5 SINE Alu 1 307 -4 274 332 31 39 chr10 140033065 140033324 -5555964 - L1M4 LINE L1 -1779 4367 4111 306 170 7 97 chr10 140033350 140033376 -5555912 - MLT1F LTR MaLR 0 548 521 1549 176 59 64 chr10 140033376 140033768 -5555520 + MLT1B LTR MaLR 1 390 0 306 170 7 97 chr10 140033768 140033841 -5555447 - MLT1F LTR MaLR -27 521 464 356 317 37 0 chr10 140033843 140034004 -5555284 - L1M4 LINE L1 -2128 4018 3852 234 279 183 0 chr10 140034052 140034156 -5555132 + L2 LINE L2 3141 3263 -9 25 0 0 0 chr10 140034682 140034707 -5554581 + AT_rich Low_complexity Low_complexity 1 25 0 203 184 0 0 chr10 140034903 140034941 -5554347 - MIR SINE MIR -133 75 38 431 256 143 0 chr10 140035290 140035423 -5553865 + MIR SINE MIR 105 256 -6 1943 193 49 61 chr10 140035458 140035950 -5553338 - MLT1D LTR MaLR 0 505 20 376 346 19 12 chr10 140036092 140036254 -5553034 + MIR SINE MIR 6 168 -94 2965 110 24 0 chr10 140036590 140037008 -5552280 + MSTC LTR MaLR 1 428 0 206 238 16 32 chr10 140037086 140037149 -5552139 + (CATATA)n Simple_repeat Simple_repeat 6 67 0 1671 182 20 36 chr10 140037214 140037581 -5551707 - MLT1A1 LTR MaLR -8 420 1 1322 225 48 6 chr10 140038782 140039093 -5550195 - L1MC2 LINE L1 -1 6343 6020 197 360 87 31 chr10 140041688 140041849 -5547439 - L2 LINE L2 -98 3174 3005 2949 184 16 32 chr10 140042040 140042665 -5546623 + L1MB3 LINE L1 5567 6181 -2 705 263 0 10 chr10 140042667 140042859 -5546429 + L1PB4 LINE L1 5975 6158 -8 232 175 0 79 chr10 140043190 140043253 -5546035 - MLT1I LTR MaLR -263 146 89 2320 86 0 0 chr10 140045173 140045463 -5543825 - AluSc SINE Alu -17 292 3 233 106 43 64 chr10 140045700 140045747 -5543541 + MLT1E2 LTR MaLR 18 63 -563 1903 221 97 8 chr10 140045927 140046401 -5542887 + MLT1E2 LTR MaLR 111 626 0 258 314 53 43 chr10 140046704 140047009 -5542279 + L1P LINE L1 3673 3972 -2174 2167 182 5 10 chr10 140047110 140047495 -5541793 - MLT1B LTR MaLR 0 390 8 1409 215 27 33 chr10 140047530 140048006 -5541282 + L1MB8 LINE L1 5566 6043 -135 443 315 30 39 chr10 140048705 140048908 -5540380 - MIR SINE MIR -11 251 51 186 43 0 0 chr10 140049114 140049137 -5540151 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 254 310 21 49 chr10 140050156 140050298 -5538990 - MER5A DNA MER1_type -36 153 16 453 284 35 24 chr10 140050410 140050579 -5538709 + MER5B DNA MER1_type 8 178 0 220 340 72 26 chr10 140050725 140050878 -5538410 - MIR3 SINE MIR -40 168 9 2563 44 0 0 chr10 140051672 140051965 -5537323 + AluY SINE Alu 1 293 -18 255 103 0 0 chr10 140051965 140052004 -5537284 + (TA)n Simple_repeat Simple_repeat 2 40 0 635 0 13 0 chr10 140052010 140052085 -5537203 + (TCTA)n Simple_repeat Simple_repeat 1 76 0 25 31 0 0 chr10 140052385 140052417 -5536871 + AT_rich Low_complexity Low_complexity 1 32 0 2412 101 0 7 chr10 140053432 140053740 -5535548 + AluSx SINE Alu 1 306 -6 414 330 40 52 chr10 140053749 140054356 -5534932 + HAL1b LINE L1 41 640 -708 272 54 0 0 chr10 140054557 140054594 -5534694 + tRNA-Cys-TGC tRNA tRNA 1 37 -38 272 27 27 0 chr10 140054829 140054866 -5534422 + (TCTA)n Simple_repeat Simple_repeat 4 41 0 2075 214 77 76 chr10 140054868 140055060 -5534228 + L1MC5 LINE L1 6615 6805 -1156 2151 122 51 28 chr10 140055060 140055412 -5533876 + THE1B LTR MaLR 2 361 -3 2075 214 77 76 chr10 140055412 140055722 -5533566 + L1MC5 LINE L1 6805 7113 -848 2074 100 14 4 chr10 140055722 140056003 -5533285 + AluSg SINE Alu 1 284 -26 2075 214 77 76 chr10 140056003 140056045 -5533243 + L1MC5 LINE L1 7113 7153 -808 182 0 0 97 chr10 140056045 140056076 -5533212 + (AAATG)n Simple_repeat Simple_repeat 5 32 0 2075 214 77 76 chr10 140056076 140056450 -5532838 + L1MC5 LINE L1 7153 7550 -411 292 276 61 17 chr10 140056669 140056806 -5532482 + MIR SINE MIR 2 145 -75 218 346 44 15 chr10 140057386 140057522 -5531766 - MIR SINE MIR -111 151 12 709 286 61 12 chr10 140057921 140058166 -5531122 + MIR SINE MIR 6 262 0 2445 278 77 83 chr10 140058369 140058537 -5530751 + L1MC5 LINE L1 5255 5423 -2385 2594 65 0 0 chr10 140058537 140058844 -5530444 + AluY SINE Alu 1 307 -4 2445 278 77 83 chr10 140058844 140060946 -5528342 + L1MC5 LINE L1 5423 7412 -396 337 307 32 48 chr10 140061118 140061307 -5527981 + MIR SINE MIR 51 236 -26 30 45 0 0 chr10 140061317 140061361 -5527927 + AT_rich Low_complexity Low_complexity 1 44 0 2382 103 0 3 chr10 140061716 140062028 -5527260 - AluY SINE Alu 0 311 1 207 0 0 0 chr10 140062251 140062274 -5527014 + (CAA)n Simple_repeat Simple_repeat 1 23 0 7751 138 18 2 chr10 140062379 140064302 -5524986 + L1PA15 LINE L1 3985 5940 -225 2230 99 3 13 chr10 140064314 140064626 -5524662 + AluSx SINE Alu 4 312 0 1373 154 0 13 chr10 140064667 140064900 -5524388 + L1PA15 LINE L1 5936 6165 0 392 335 17 0 chr10 140065321 140065497 -5523791 + MIR SINE MIR 74 252 -10 2828 141 46 11 chr10 140066596 140067073 -5522215 + MLT1D LTR MaLR 5 498 -7 478 260 67 7 chr10 140068244 140068394 -5520894 + MER117 DNA MER1_type 1 159 -38 200 358 66 26 chr10 140068440 140068591 -5520697 + L2 LINE L2 3104 3260 -12 250 321 69 25 chr10 140070492 140070651 -5518637 - L2 LINE L2 -924 2390 2225 297 0 0 0 chr10 140071765 140071798 -5517490 + (TG)n Simple_repeat Simple_repeat 1 33 0 369 266 14 29 chr10 140072164 140072303 -5516985 + MARNA DNA Mariner 208 344 -242 448 234 169 60 chr10 140072791 140073039 -5516249 - ORSL DNA AcHobo 0 275 1 2127 107 4 0 chr10 140073342 140073623 -5515665 + AluSx SINE Alu 15 296 -16 716 220 19 19 chr10 140074539 140074698 -5514590 + MER45A DNA AcHobo 4 162 -16 700 161 155 42 chr10 140074756 140074949 -5514339 - MIR SINE MIR -32 230 16 1421 82 65 73 chr10 140076398 140076630 -5512658 - MER30 DNA MER1_type 0 230 1 213 231 33 88 chr10 140078502 140078559 -5510729 + MIR SINE MIR 104 156 -106 2144 118 48 31 chr10 140078559 140078915 -5510373 - THE1B LTR MaLR 0 364 3 213 231 33 88 chr10 140078915 140078948 -5510340 + MIR SINE MIR 156 189 -73 222 317 12 0 chr10 140082524 140082606 -5506682 + L2 LINE L2 3190 3272 0 1890 103 17 31 chr10 140082735 140083026 -5506262 + AluSc SINE Alu 13 299 -10 315 193 0 0 chr10 140083353 140083410 -5505878 - HsTC2 DNA Tc2 0 1898 1842 221 296 74 9 chr10 140083460 140083568 -5505720 + L2 LINE L2 2682 2796 -518 299 111 79 16 chr10 140083676 140083739 -5505549 - MER104 DNA Tc2 -46 134 68 978 193 18 41 chr10 140083807 140084025 -5505263 + MER20 DNA MER1_type 2 214 -5 353 234 13 0 chr10 140084061 140084138 -5505150 + MER20 DNA MER1_type 138 215 -4 192 77 0 0 chr10 140084871 140084897 -5504391 + (GAAA)n Simple_repeat Simple_repeat 3 28 0 414 0 0 0 chr10 140085857 140085903 -5503385 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 5977 98 0 6 chr10 140085904 140086276 -5503012 - L1PB1 LINE L1 -6 6145 5772 333 0 0 0 chr10 140086276 140086313 -5502975 + (TA)n Simple_repeat Simple_repeat 1 37 0 5977 98 0 6 chr10 140086313 140087166 -5502122 - L1PB1 LINE L1 -379 5772 4924 328 212 30 61 chr10 140087412 140087511 -5501777 - MLT1H LTR MaLR -33 516 421 290 214 12 0 chr10 140088210 140088294 -5500994 + CT-rich Low_complexity Low_complexity 1 85 0 311 283 20 10 chr10 140088294 140088393 -5500895 - MLT1K LTR MaLR -165 423 324 3541 254 102 63 chr10 140088423 140090416 -5498872 - HAL1 LINE L1 -1 2506 421 1654 156 26 36 chr10 140090416 140090718 -5498570 + AluJo SINE Alu 9 307 -5 3541 254 102 63 chr10 140090718 140090882 -5498406 - HAL1 LINE L1 -2086 421 265 276 30 0 0 chr10 140090964 140090997 -5498291 + (TG)n Simple_repeat Simple_repeat 2 34 0 249 57 0 0 chr10 140091809 140091844 -5497444 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 2119 88 3 25 chr10 140091847 140092131 -5497157 - AluSx SINE Alu -34 278 1 21 71 0 0 chr10 140093199 140093241 -5496047 + AT_rich Low_complexity Low_complexity 1 42 0 199 310 14 0 chr10 140095042 140095113 -5494175 + MIR3 SINE MIR 120 191 -17 273 206 219 0 chr10 140099662 140099735 -5489553 - L2 LINE L2 0 3313 3225 220 250 17 0 chr10 140099783 140099843 -5489445 + (TA)n Simple_repeat Simple_repeat 1 61 0 465 256 111 6 chr10 140099953 140100133 -5489155 - L2 LINE L2 -413 2901 2703 3180 86 35 2 chr10 140100530 140100960 -5488328 + MLT2A1 LTR ERVL 1 444 0 368 291 30 48 chr10 140102064 140102229 -5487059 - MIR SINE MIR -48 214 53 1339 284 52 25 chr10 140102272 140102677 -5486611 - MLT1E LTR MaLR -176 417 2 2522 125 8 8 chr10 140102829 140103204 -5486084 - THE1C LTR MaLR 0 375 1 671 239 22 87 chr10 140103320 140103550 -5485738 - MIR SINE MIR -15 247 33 480 288 53 22 chr10 140104303 140104529 -5484759 + MIR SINE MIR 18 250 -12 1468 225 45 19 chr10 140104788 140105227 -5484061 + MER89 LTR ERV1 1 550 -9 395 353 74 0 chr10 140105630 140105874 -5483414 - L1MC/D LINE L1 -1997 5811 5550 383 304 61 9 chr10 140105899 140106113 -5483175 - L1MC/D LINE L1 -2330 5478 5254 195 184 0 0 chr10 140106505 140106543 -5482745 + CT-rich Low_complexity Low_complexity 4 41 0 379 263 242 16 chr10 140106559 140106753 -5482535 - MIR SINE MIR -3 259 22 253 287 139 9 chr10 140106827 140106942 -5482346 + MIR3 SINE MIR 74 203 -5 642 308 182 15 chr10 140107681 140108159 -5481129 + MLT1K LTR MaLR 12 569 -19 640 243 39 8 chr10 140109387 140109588 -5479700 + MIR SINE MIR 45 249 -13 213 39 0 0 chr10 140109644 140109670 -5479618 + (CAG)n Simple_repeat Simple_repeat 1 26 0 1971 159 0 22 chr10 140109808 140110123 -5479165 - AluSx SINE Alu -4 308 1 212 184 0 0 chr10 140111318 140111356 -5477932 + GA-rich Low_complexity Low_complexity 2 39 0 245 306 81 48 chr10 140113464 140113588 -5475700 + L2 LINE L2 3186 3313 0 234 296 70 43 chr10 140113795 140113910 -5475378 + L3b LINE CR1 1286 1403 -180 5137 288 89 60 chr10 140113924 140114176 -5475112 + HAL1 LINE L1 1 244 -2263 2028 152 3 0 chr10 140114176 140114472 -5474816 + AluSx SINE Alu 1 297 -15 5137 288 89 60 chr10 140114472 140116656 -5472632 + HAL1 LINE L1 244 2507 0 282 229 143 0 chr10 140117469 140117605 -5471683 + MIR SINE MIR 45 206 -56 306 278 62 10 chr10 140117801 140117898 -5471390 - MIR SINE MIR -127 135 34 436 231 8 16 chr10 140121336 140121457 -5467831 + MIR3 SINE MIR 81 200 -8 1602 96 28 0 chr10 140122143 140122361 -5466927 + L1MA1 LINE L1 6079 6302 0 675 211 139 26 chr10 140123584 140123738 -5465550 - L1ME4a LINE L1 -14 6107 5972 2308 58 0 0 chr10 140123738 140124039 -5465249 + AluY SINE Alu 6 306 0 675 211 139 26 chr10 140124039 140124186 -5465102 - L1ME4a LINE L1 -149 5972 5771 265 209 2 0 chr10 140124188 140124247 -5465041 - L1ME LINE L1 -312 5809 5750 273 298 19 25 chr10 140124293 140124451 -5464837 - L1ME LINE L1 -364 5757 5601 388 255 57 98 chr10 140124459 140124599 -5464689 - L1MC4 LINE L1 0 8042 7898 261 0 0 0 chr10 140124599 140124628 -5464660 + (CA)n Simple_repeat Simple_repeat 1 29 0 388 255 57 98 chr10 140124628 140124856 -5464432 - L1MC4 LINE L1 -144 7898 7689 2727 244 50 27 chr10 140124955 140126225 -5463063 - L1ME1 LINE L1 -5 6161 4856 887 114 16 0 chr10 140126966 140127089 -5462199 - FLAM_C SINE Alu -18 125 1 225 302 155 17 chr10 140127381 140127497 -5461791 - L2 LINE L2 -1 3271 3140 422 218 48 48 chr10 140128378 140128525 -5460763 - MLT1J LTR MaLR -364 147 1 672 301 72 59 chr10 140128614 140129056 -5460232 + LTR16C LTR ERVL 29 476 -15 302 68 0 0 chr10 140129625 140129669 -5459619 + L1MA3 LINE L1 6262 6305 0 243 143 0 0 chr10 140130483 140130518 -5458770 + U2 snRNA snRNA 1 35 -153 3492 30 0 5 chr10 140131201 140131594 -5457694 + L1PA3 LINE L1 5765 6155 0 226 248 104 64 chr10 140132565 140132767 -5456521 - L2 LINE L2 -1607 1707 1498 291 259 19 46 chr10 140133100 140133208 -5456080 - L2 LINE L2 -874 2440 2336 2568 159 24 20 chr10 140133208 140133584 -5455704 + L1MC1 LINE L1 5880 6260 -73 2418 122 16 44 chr10 140133584 140133970 -5455318 - THE1C LTR MaLR 0 375 1 2568 159 24 20 chr10 140133970 140134045 -5455243 + L1MC1 LINE L1 6260 6333 0 351 262 56 83 chr10 140134120 140134444 -5454844 + L1ME LINE L1 5265 5579 -587 189 74 0 0 chr10 140134828 140134855 -5454433 + (CTG)n Simple_repeat Simple_repeat 1 27 0 222 207 0 0 chr10 140135298 140135356 -5453932 + A-rich Low_complexity Low_complexity 2 59 0 3347 144 21 23 chr10 140136609 140137170 -5452118 + L1PB3 LINE L1 5594 6153 -1 6232 62 0 0 chr10 140138508 140139237 -5450051 - L1PA8 LINE L1 -2 6170 5442 240 283 159 0 chr10 140139499 140139612 -5449676 + MIR SINE MIR 127 257 -5 681 84 0 0 chr10 140139614 140139697 -5449591 - AluJ/FLAM SINE Alu -228 84 2 555 239 49 81 chr10 140141049 140141296 -5447992 + MLT1K LTR MaLR 311 549 -39 1431 209 7 3 chr10 140143897 140144203 -5445085 - MER33 DNA MER1_type -17 307 1 336 227 0 13 chr10 140144211 140144286 -5445002 - MER69 DNA AcHobo -327 2199 2126 1139 191 43 0 chr10 140144314 140144545 -5444743 - MER69 DNA AcHobo -445 2081 1841 1306 58 0 0 chr10 140144639 140144794 -5444494 + AluY SINE Alu 155 309 -2 2013 272 18 18 chr10 140144921 140145435 -5443853 + LTR40a LTR ERVL 6 519 0 741 246 177 0 chr10 140145544 140145804 -5443484 - MER69 DNA AcHobo -2168 358 53 1856 192 22 82 chr10 140146502 140146605 -5442683 - MLT1D LTR MaLR 0 505 397 2513 164 44 13 chr10 140146605 140147080 -5442208 + L1MA9 LINE L1 5823 6312 0 1856 192 22 82 chr10 140147080 140147512 -5441776 - MLT1D LTR MaLR -108 397 2 2594 56 0 0 chr10 140147912 140148218 -5441070 + AluY SINE Alu 1 306 -5 2292 98 0 13 chr10 140148649 140148954 -5440334 - AluSx SINE Alu -9 303 3 670 192 51 13 chr10 140148973 140149129 -5440159 - L1ME2 LINE L1 -15 6149 5988 3295 196 32 28 chr10 140149152 140149870 -5439418 - L1MD1 LINE L1 -6 6236 5516 572 172 0 0 chr10 140149862 140149949 -5439339 - L1MDa LINE L1 -6283 257 171 * 1426 166 87 94 chr10 140149949 140150418 -5438870 - MER66A LTR ERV1 0 601 100 632 248 7 13 chr10 140150507 140150660 -5438628 - L1MDa LINE L1 -6370 170 19 1374 231 25 45 chr10 140150679 140151082 -5438206 - L1ME3 LINE L1 -3 6159 5765 239 274 83 24 chr10 140151969 140152053 -5437235 - MIR SINE MIR -60 148 60 2675 218 114 19 chr10 140152520 140152922 -5436366 - L1MCa LINE L1 -5069 976 614 216 0 0 0 chr10 140152922 140152946 -5436342 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2675 218 114 19 chr10 140152946 140153506 -5435782 - L1MCa LINE L1 -5431 614 4 475 275 112 24 chr10 140153549 140153836 -5435452 - L1MC5 LINE L1 -101 7860 7549 349 244 35 0 chr10 140153934 140154020 -5435268 - L1MC4 LINE L1 -1339 6772 6684 1479 152 167 33 chr10 140154100 140154429 -5434859 + THE1C LTR MaLR 3 375 0 646 241 41 24 chr10 140154517 140154687 -5434601 - MER101 LTR ERV1 -71 403 231 330 278 160 34 chr10 140154909 140155172 -5434116 - L1MC4 LINE L1 -1908 5969 5674 487 215 0 9 chr10 140155177 140155284 -5434004 - L1MA10 LINE L1 -3 6331 6226 2590 248 18 22 chr10 140155298 140156128 -5433160 - L1MC4 LINE L1 -2700 3515 2689 563 219 39 0 chr10 140156128 140156256 -5433032 + L1MEc LINE L1 2320 2452 -3944 1170 220 4 4 chr10 140156271 140156526 -5432762 - L1MC4 LINE L1 -3554 2661 2407 618 266 72 13 chr10 140156526 140156763 -5432525 - L1MC4 LINE L1 -5076 1320 1070 222 261 261 11 chr10 140157103 140157195 -5432093 + L2 LINE L2 3134 3248 -24 2129 135 0 6 chr10 140157201 140157513 -5431775 - AluSx SINE Alu -2 310 1 1785 171 12 0 chr10 140158108 140158453 -5430835 + L1MC3 LINE L1 7437 7785 0 368 318 172 13 chr10 140158776 140159078 -5430210 - L1ME4a LINE L1 -287 5834 5485 424 326 5 31 chr10 140159851 140160044 -5429244 - MIR SINE MIR -19 243 56 2115 128 0 0 chr10 140160583 140160879 -5428409 - AluSx SINE Alu -16 296 1 294 390 42 26 chr10 140160884 140161148 -5428140 + L2 LINE L2 2997 3264 -8 530 309 98 29 chr10 140162542 140162962 -5426326 + MLT1K LTR MaLR 108 556 -32 231 261 33 43 chr10 140162991 140163083 -5426205 + L2 LINE L2 3162 3252 -61 653 172 134 19 chr10 140163091 140163248 -5426040 - AluJo SINE Alu -15 297 123 24 67 0 0 chr10 140163694 140163739 -5425549 + AT_rich Low_complexity Low_complexity 1 45 0 5705 233 93 18 chr10 140164434 140166308 -5422980 - L1ME LINE L1 -405 5761 4029 282 56 0 0 chr10 140166308 140166344 -5422944 + (TG)n Simple_repeat Simple_repeat 2 37 0 5705 233 93 18 chr10 140166344 140166553 -5422735 - L1ME LINE L1 -2137 4029 3837 195 42 0 0 chr10 140166553 140166577 -5422711 + (TG)n Simple_repeat Simple_repeat 1 24 0 5705 233 93 18 chr10 140166577 140167042 -5422246 - L1ME LINE L1 -2329 3837 3023 805 277 10 0 chr10 140167033 140167325 -5421963 - L1ME LINE L1 -3467 2679 2385 * 1380 244 27 9 chr10 140167324 140167774 -5421514 + L1MEc LINE L1 674 1131 -5265 2860 184 15 36 chr10 140167775 140168445 -5420843 - L1MC3 LINE L1 -1318 6467 5812 21 0 0 0 chr10 140168543 140168564 -5420724 + AT_rich Low_complexity Low_complexity 1 21 0 678 375 86 16 chr10 140168566 140169368 -5419920 + L2 LINE L2 2414 3272 0 196 303 169 0 chr10 140169378 140169467 -5419821 + MIR SINE MIR 12 115 -147 6040 144 23 19 chr10 140169475 140171048 -5418240 - L1MA4A LINE L1 0 7005 5410 5162 103 91 31 chr10 140171048 140172145 -5417143 - MER11A LTR ERVK 0 1266 1 15084 177 21 24 chr10 140172146 140174643 -5414645 - L1MA4A LINE L1 -1434 5414 2911 2103 112 17 7 chr10 140174643 140174930 -5414358 - AluSq SINE Alu -23 290 1 15084 177 21 24 chr10 140174930 140175510 -5413778 - L1MA4A LINE L1 -3937 2911 2331 2060 110 161 13 chr10 140175510 140175883 -5413405 - MSTA LTR MaLR 0 428 1 8644 144 40 40 chr10 140175883 140177459 -5411829 - MSTA-int LTR MaLR 0 1580 5 2021 148 125 13 chr10 140177463 140177848 -5411440 - MSTA LTR MaLR 0 428 1 15084 177 21 24 chr10 140177848 140180195 -5409093 - L1MA4A LINE L1 -4519 2329 2 21 36 0 0 chr10 140180409 140180437 -5408851 + AT_rich Low_complexity Low_complexity 1 28 0 2465 86 0 0 chr10 140180864 140181168 -5408120 - AluY SINE Alu -5 306 3 385 339 52 17 chr10 140181853 140182050 -5407238 - HAL1 LINE L1 -844 1663 1455 2344 111 33 22 chr10 140182050 140182410 -5406878 + THE1B LTR MaLR 1 364 0 385 339 52 17 chr10 140182410 140182442 -5406846 - HAL1 LINE L1 -1052 1455 1426 228 35 0 0 chr10 140182887 140182916 -5406372 + (CAA)n Simple_repeat Simple_repeat 2 30 0 2171 246 109 30 chr10 140183091 140183568 -5405720 - Charlie2a DNA MER1_type -25 2837 2399 1658 187 0 16 chr10 140183568 140183873 -5405415 + AluJo SINE Alu 1 300 -12 2171 246 109 30 chr10 140183873 140184645 -5404643 - Charlie2a DNA MER1_type -463 2399 1490 1779 221 26 14 chr10 140184679 140185100 -5404188 - MLT1C LTR MaLR -6 461 36 270 232 21 0 chr10 140185142 140185237 -5404051 - Charlie2a DNA MER1_type -1386 1476 1380 600 292 17 0 chr10 140185345 140185523 -5403765 + L1MC/D LINE L1 5496 5676 -2132 40 49 0 0 chr10 140185609 140185670 -5403618 + AT_rich Low_complexity Low_complexity 1 61 0 1263 232 59 44 chr10 140185671 140186046 -5403242 - Charlie2a DNA MER1_type -1586 1276 889 1574 159 8 102 chr10 140186046 140186448 -5402840 + MLT1A1 LTR MaLR 2 365 0 1263 232 59 44 chr10 140186448 140186577 -5402711 - Charlie2a DNA MER1_type -1973 889 764 1328 273 45 20 chr10 140186586 140186925 -5402363 + L1MC4a LINE L1 5496 5854 -1954 1194 212 130 13 chr10 140186925 140186990 -5402298 - MER2 DNA MER2_type 0 344 288 180 0 0 0 chr10 140186990 140187010 -5402278 + (TA)n Simple_repeat Simple_repeat 1 20 0 1194 212 130 13 chr10 140187010 140187251 -5402037 - MER2 DNA MER2_type -56 288 2 1328 273 45 20 chr10 140187251 140187416 -5401872 + L1MC4a LINE L1 5854 6013 -1795 307 253 187 28 chr10 140187427 140187609 -5401679 + L1MC4a LINE L1 6054 6264 -1544 297 213 55 70 chr10 140187675 140187830 -5401458 + L1MC4a LINE L1 6701 6780 -1028 2286 241 43 27 chr10 140187836 140188695 -5400593 + L1ME1 LINE L1 4356 5228 -918 226 157 86 0 chr10 140188776 140188846 -5400442 + (TA)n Simple_repeat Simple_repeat 2 77 0 3000 225 55 13 chr10 140188846 140189730 -5399558 + L1ME1 LINE L1 5237 6162 -4 313 230 0 23 chr10 140189742 140189840 -5399448 + L1MC4 LINE L1 6852 7002 -866 1068 225 92 28 chr10 140189852 140190319 -5398969 + L1MC5 LINE L1 7305 7801 -160 366 302 56 0 chr10 140190335 140190461 -5398827 - MIR SINE MIR -48 214 82 5256 192 51 10 chr10 140190489 140191590 -5397698 - ERVL LTR ERVL -3553 2211 1066 370 321 16 96 chr10 140192271 140192458 -5396830 + L1ME LINE L1 5603 5774 -347 2081 116 0 45 chr10 140192458 140192768 -5396520 - AluSx SINE Alu -16 296 1 2107 104 46 52 chr10 140194405 140194771 -5394517 - THE1B LTR MaLR 0 364 1 192 347 74 11 chr10 140194969 140195064 -5394224 - L2 LINE L2 -4 3268 3168 830 121 0 34 chr10 140195108 140195257 -5394031 + L1MB2 LINE L1 6028 6171 0 1075 253 98 14 chr10 140195275 140195642 -5393646 + MLT1F1 LTR MaLR 11 408 -159 306 214 318 8 chr10 140195802 140195928 -5393360 + L1MDb LINE L1 562 726 -5683 239 182 0 0 chr10 140195996 140196040 -5393248 + MLT1F1 LTR MaLR 543 586 -9 554 153 0 0 chr10 140196207 140196292 -5392996 - AluJ/FLAM SINE Alu -227 85 1 345 331 68 18 chr10 140196519 140196682 -5392606 - MIR3 SINE MIR -15 193 23 207 254 0 0 chr10 140197325 140197388 -5391900 + CT-rich Low_complexity Low_complexity 2 64 0 500 284 85 100 chr10 140197643 140198346 -5390942 - HAL1 LINE L1 -975 1532 840 616 281 117 18 chr10 140199265 140199546 -5389742 - L2 LINE L2 0 3313 3005 350 300 9 0 chr10 140200127 140200237 -5389051 + LTR16C LTR ERVL 381 491 0 297 318 97 57 chr10 140200673 140200849 -5388439 + L3 LINE CR1 470 652 -925 336 280 113 65 chr10 140200986 140201199 -5388089 - MIR SINE MIR -6 256 15 246 275 18 46 chr10 140201199 140201308 -5387980 + MER5A DNA MER1_type 1 106 -83 284 248 289 33 chr10 140201455 140201725 -5387563 + Charlie2 DNA MER1_type 7 345 -2517 * 2126 216 111 45 chr10 140201698 140201778 -5387510 + Charlie2 DNA MER1_type 1856 1929 -933 2357 96 7 0 chr10 140201778 140202079 -5387209 - AluSx SINE Alu -9 303 1 2126 216 111 45 chr10 140202079 140202413 -5386875 + Charlie2 DNA MER1_type 1929 2240 -622 1565 158 68 7 chr10 140202413 140202692 -5386596 + AluJo SINE Alu 1 296 -16 2126 216 111 45 chr10 140202692 140203221 -5386067 + Charlie2 DNA MER1_type 2240 2862 0 192 163 0 0 chr10 140203803 140203846 -5385442 + T-rich Low_complexity Low_complexity 1 43 0 7441 28 0 2 chr10 140203869 140205109 -5384179 - L1PA3 LINE L1 -3 6152 4905 228 167 0 0 chr10 140205830 140205878 -5383410 + (TG)n Simple_repeat Simple_repeat 1 48 0 226 286 160 25 chr10 140206606 140206757 -5382531 + MIR3 SINE MIR 6 170 -58 21 0 0 0 chr10 140207577 140207598 -5381690 + AT_rich Low_complexity Low_complexity 1 21 0 389 234 23 27 chr10 140208121 140208249 -5381039 - L1MCa LINE L1 -1339 6983 1994 585 288 40 46 chr10 140209389 140209913 -5379375 + HAL1b LINE L1 59 579 -769 306 250 42 111 chr10 140210202 140210648 -5378640 + L1M4c LINE L1 2256 2673 -3709 25 0 0 0 chr10 140210705 140210730 -5378558 + AT_rich Low_complexity Low_complexity 1 25 0 6847 45 7 0 chr10 140210730 140211613 -5377675 - L1PA6 LINE L1 -3 6151 5263 1331 60 0 0 chr10 140211611 140211796 -5377492 + L1PA6 LINE L1 5088 5272 -874 * 5039 171 55 5 chr10 140212012 140212984 -5376304 + Tigger7 DNA MER2_type 4 1023 -1464 444 179 0 0 chr10 140212988 140213066 -5376222 + Tigger7 DNA MER2_type 2403 2480 -7 316 309 85 31 chr10 140213078 140213104 -5376184 + L1M4c LINE L1 2924 2947 -3435 1328 176 99 59 chr10 140213104 140213479 -5375809 + MLT1B LTR MaLR 1 390 0 316 309 85 31 chr10 140213479 140214286 -5375002 + L1M4c LINE L1 2947 3802 -2580 654 261 22 14 chr10 140214376 140214598 -5374690 + L1ME3 LINE L1 3587 3810 -2572 768 255 0 0 chr10 140214602 140214751 -5374537 + AluJb SINE Alu 137 285 -27 385 324 38 5 chr10 140214818 140215028 -5374260 + L1ME3 LINE L1 3808 4024 -2358 1847 221 112 32 chr10 140215028 140215551 -5373737 + L1ME3 LINE L1 4865 5345 -1053 2160 103 7 0 chr10 140215551 140215832 -5373456 + AluSx SINE Alu 4 286 -26 348 24 0 0 chr10 140215839 140215880 -5373408 + (CA)n Simple_repeat Simple_repeat 2 42 0 1847 221 112 32 chr10 140215880 140216057 -5373231 + L1ME3 LINE L1 5350 5511 -887 2196 118 7 0 chr10 140216057 140216361 -5372927 + AluSg SINE Alu 3 308 -2 1847 221 112 32 chr10 140216361 140217054 -5372234 + L1ME3 LINE L1 5511 6396 -2 265 227 100 0 chr10 140217059 140217169 -5372119 + L1ME3 LINE L1 1623 1743 -4653 459 320 43 28 chr10 140217219 140217472 -5371816 + L1ME3 LINE L1 1847 2103 -4293 183 80 0 0 chr10 140217486 140217511 -5371777 + (TA)n Simple_repeat Simple_repeat 1 25 0 3133 263 35 27 chr10 140217513 140218818 -5370470 + L1ME3 LINE L1 2093 3374 -2841 2046 146 3 16 chr10 140218818 140219134 -5370154 + AluJb SINE Alu 1 312 0 3133 263 35 27 chr10 140219134 140219433 -5369855 + L1ME3 LINE L1 3374 3669 -2546 444 269 76 15 chr10 140219492 140219689 -5369599 + L1ME3 LINE L1 4798 5006 -1209 677 211 83 6 chr10 140219689 140219869 -5369419 - MLT1A1 LTR MaLR 0 365 172 503 312 64 8 chr10 140220027 140220277 -5369011 - L1M4 LINE L1 -3092 3054 2791 364 43 0 0 chr10 140220277 140220351 -5368937 + AluY SINE Alu 241 314 0 1718 252 65 5 chr10 140220353 140220904 -5368384 + L1ME3 LINE L1 5648 6231 0 463 298 21 5 chr10 140220936 140221124 -5368164 + L1MEc LINE L1 1627 1817 -4579 262 287 58 50 chr10 140221125 140221287 -5368001 + L1MEc LINE L1 1856 2022 -4374 2085 132 23 6 chr10 140221287 140221636 -5367652 - THE1A LTR MaLR 0 355 1 262 287 58 50 chr10 140221636 140221734 -5367554 + L1MEc LINE L1 2022 2118 -4278 1597 160 41 44 chr10 140221943 140222236 -5367052 + AluJo SINE Alu 1 292 -20 1149 215 49 37 chr10 140222391 140222904 -5366384 + MER34C LTR ERV1 11 585 0 186 103 0 0 chr10 140226216 140226245 -5363043 + (ATGGTG)n Simple_repeat Simple_repeat 1 29 0 226 299 43 26 chr10 140226443 140226560 -5362728 + L1ME LINE L1 5538 5656 -465 1474 181 234 8 chr10 140227159 140227540 -5361748 - MLT1C LTR MaLR 0 467 1 194 242 0 0 chr10 140228428 140228461 -5360827 - L2 LINE L2 -37 3276 3244 282 135 0 19 chr10 140228862 140228914 -5360374 + LTR33A LTR ERVL 443 493 -30 2085 139 0 0 chr10 140228928 140229244 -5360044 - AluSx SINE Alu 0 316 1 234 318 39 54 chr10 140229996 140230125 -5359163 - MIR3 SINE MIR -51 157 31 2324 114 23 26 chr10 140231066 140231451 -5357837 - Tigger2 DNA MER2_type 0 2718 2335 1808 112 77 0 chr10 140231497 140231756 -5357532 + AluSx SINE Alu 1 279 -33 592 232 26 0 chr10 140231782 140231937 -5357351 + Charlie8 DNA MER1_type 107 265 -2152 219 312 65 32 chr10 140232181 140232274 -5357014 + MIR3 SINE MIR 99 194 -14 389 295 37 47 chr10 140234605 140234795 -5354493 + MIR SINE MIR 61 248 -14 195 42 0 0 chr10 140235343 140235367 -5353921 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 484 290 116 59 chr10 140235367 140235825 -5353463 - L2 LINE L2 -17 3296 2813 1773 178 3 3 chr10 140235957 140236255 -5353033 + AluJb SINE Alu 1 298 -14 675 208 126 15 chr10 140236736 140237261 -5352027 - LTR50 LTR ERVL -5 790 12 240 107 71 18 chr10 140237262 140237318 -5351970 - L1M4 LINE L1 -825 5321 5263 968 264 46 67 chr10 140237545 140238192 -5351096 - L1ME LINE L1 -5346 724 91 447 338 69 30 chr10 140238324 140238807 -5350481 - L1MC/D LINE L1 -757 5389 5101 2158 122 0 0 chr10 140239200 140239488 -5349800 - AluSx SINE Alu -24 288 1 29 90 0 0 chr10 140239946 140240024 -5349264 + AT_rich Low_complexity Low_complexity 1 78 0 297 291 0 19 chr10 140240631 140240734 -5348554 + (TATATG)n Simple_repeat Simple_repeat 6 106 0 2212 127 0 13 chr10 140243909 140244224 -5345064 + AluSx SINE Alu 1 311 -1 677 290 93 60 chr10 140246053 140246414 -5342874 + HAL1 LINE L1 278 625 -1882 2194 109 0 13 chr10 140246414 140246716 -5342572 + AluSx SINE Alu 15 312 0 677 290 93 60 chr10 140246716 140247092 -5342196 + HAL1 LINE L1 625 1040 -1467 512 209 8 85 chr10 140247102 140247231 -5342057 + FLAM_C SINE Alu 2 120 -13 195 69 0 0 chr10 140247276 140247305 -5341983 + (TA)n Simple_repeat Simple_repeat 1 29 0 * 207 0 0 0 chr10 140247304 140247327 -5341961 + (GA)n Simple_repeat Simple_repeat 2 24 0 1077 162 5 35 chr10 140247327 140247525 -5341763 - AluJb SINE Alu -34 278 87 1205 297 74 23 chr10 140247545 140248289 -5340999 + HAL1 LINE L1 1072 1853 -654 366 23 0 0 chr10 140248329 140248372 -5340916 + (CA)n Simple_repeat Simple_repeat 2 44 0 311 249 36 31 chr10 140248470 140248663 -5340625 + HAL1 LINE L1 2012 2205 -302 21 57 0 0 chr10 140249080 140249115 -5340173 + AT_rich Low_complexity Low_complexity 1 35 0 514 324 49 20 chr10 140249174 140249421 -5339867 - MIR SINE MIR -2 260 7 31712 60 3 4 chr10 140249692 140254779 -5334509 + L1PA5 LINE L1 1071 6153 -1 879 239 107 32 chr10 140255046 140255364 -5333924 + L1ME3A LINE L1 5477 5833 -337 195 42 0 0 chr10 140255364 140255388 -5333900 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 879 239 107 32 chr10 140255388 140255471 -5333817 + L1ME3A LINE L1 5833 5908 -262 2305 115 0 3 chr10 140256578 140256891 -5332397 - AluSx SINE Alu 0 312 1 252 290 147 45 chr10 140257110 140257334 -5331954 - MIR SINE MIR -2 260 14 465 308 62 33 chr10 140258863 140259074 -5330214 - MIR SINE MIR -33 229 13 865 273 88 43 chr10 140259372 140259486 -5329802 + L1MC4 LINE L1 6220 6327 -1566 2107 139 10 0 chr10 140259486 140259795 -5329493 + AluSx SINE Alu 1 312 0 865 273 88 43 chr10 140259795 140260397 -5328891 + L1MC4 LINE L1 6327 7068 -825 405 275 30 73 chr10 140260461 140260900 -5328388 + L1MC4 LINE L1 7000 7428 -614 2219 92 0 71 chr10 140260964 140261301 -5327987 + AluSq SINE Alu 1 313 0 1802 189 56 22 chr10 140261304 140261320 -5327968 + MER95 LTR ERV 6 20 -411 2300 98 0 31 chr10 140261320 140261638 -5327650 + AluSg SINE Alu 1 308 -2 1802 189 56 22 chr10 140261638 140262029 -5327259 + MER95 LTR ERV 20 427 -4 2054 110 17 28 chr10 140262296 140262586 -5326702 - AluSx SINE Alu -25 287 1 303 80 0 0 chr10 140262647 140262697 -5326591 + AluSp/q SINE Alu 254 303 0 20000 151 27 23 chr10 140262731 140270402 -5318886 + L1MA1 LINE L1 12 7712 -9 21 0 0 0 chr10 140270403 140270424 -5318864 + AT_rich Low_complexity Low_complexity 1 21 0 262 233 177 73 chr10 140270433 140270750 -5318538 + L1MC4 LINE L1 7594 7943 -99 21 0 0 0 chr10 140270799 140270820 -5318468 + AT_rich Low_complexity Low_complexity 1 21 0 189 0 0 0 chr10 140271053 140271074 -5318214 + (GA)n Simple_repeat Simple_repeat 2 22 0 434 274 70 6 chr10 140271116 140271273 -5318015 - MIR SINE MIR -49 213 47 15587 122 22 15 chr10 140271432 140272036 -5317252 - Tigger1 DNA MER2_type 0 2418 1820 3299 70 5 0 chr10 140272036 140272462 -5316826 - L1PA10 LINE L1 -4 6164 5737 15587 122 22 15 chr10 140272462 140274234 -5315054 - Tigger1 DNA MER2_type -598 1820 24 451 282 252 39 chr10 140274767 140274792 -5314496 - L2 LINE L2 -584 2730 2712 2348 201 103 24 chr10 140274792 140275146 -5314142 - MLT1E3 LTR MaLR -4 620 202 2167 131 0 3 chr10 140275146 140275451 -5313837 + AluSx SINE Alu 1 304 -8 2348 201 103 24 chr10 140275451 140275669 -5313619 - MLT1E3 LTR MaLR -422 202 3 451 282 252 39 chr10 140275669 140276047 -5313241 - L2 LINE L2 -602 2712 2415 869 231 79 0 chr10 140276047 140276250 -5313038 + MER20 DNA MER1_type 1 219 0 451 282 252 39 chr10 140276250 140276632 -5312656 - L2 LINE L2 -899 2415 1777 22 35 0 0 chr10 140280294 140280323 -5308965 + GC_rich Low_complexity Low_complexity 1 29 0 303 171 80 11 chr10 140280854 140280942 -5308346 + MIR SINE MIR 79 172 -90 720 161 5 0 chr10 140282575 140283023 -5306265 + (CA)n Simple_repeat Simple_repeat 1 450 0 210 71 0 0 chr10 140283588 140283616 -5305672 + (TG)n Simple_repeat Simple_repeat 2 29 0 297 0 0 0 chr10 140284853 140284886 -5304402 + (TG)n Simple_repeat Simple_repeat 2 34 0 183 233 70 0 chr10 140285540 140285583 -5303705 - MIR SINE MIR -113 149 104 224 100 25 0 chr10 140285687 140285727 -5303561 + (CA)n Simple_repeat Simple_repeat 1 41 0 430 251 71 37 chr10 140286759 140286964 -5302324 - MIR SINE MIR -33 229 16 194 241 0 56 chr10 140289296 140289350 -5299938 - MIR SINE MIR -68 140 90 13802 60 5 10 chr10 140289460 140291990 -5297298 - L1PA6 LINE L1 -15 6139 3619 471 178 0 0 chr10 140292383 140292456 -5296832 + Cheshire DNA MER1_type 33 105 -2315 2084 150 0 3 chr10 140292465 140292772 -5296516 + AluSx SINE Alu 3 308 -4 185 32 0 65 chr10 140292777 140292808 -5296480 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 627 295 20 5 chr10 140292810 140293010 -5296278 + Cheshire DNA MER1_type 102 304 -2116 1683 219 20 89 chr10 140293159 140293512 -5295776 + Cheshire DNA MER1_type 348 651 -1769 617 239 15 0 chr10 140293512 140293642 -5295646 + FLAM_A SINE Alu 2 133 0 1683 219 20 89 chr10 140293642 140293837 -5295451 + Cheshire DNA MER1_type 651 858 -1562 714 217 23 6 chr10 140293847 140294022 -5295266 + Cheshire DNA MER1_type 2243 2420 0 238 214 51 20 chr10 140294064 140294162 -5295126 + L1M4c LINE L1 2327 2427 -3957 938 298 107 40 chr10 140294176 140294879 -5294409 + L1M4c LINE L1 2449 3104 -3278 1675 176 24 10 chr10 140294879 140295169 -5294119 + AluJo SINE Alu 5 298 -14 938 298 107 40 chr10 140295169 140295341 -5293947 + L1M4c LINE L1 3104 3263 -3119 2259 111 13 0 chr10 140295341 140295460 -5293828 + AluSx SINE Alu 3 119 -193 216 0 0 0 chr10 140295460 140295484 -5293804 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2259 111 13 0 chr10 140295484 140295670 -5293618 + AluSx SINE Alu 119 312 0 938 298 107 40 chr10 140295670 140295781 -5293507 + L1M4c LINE L1 3263 3502 -2880 290 278 9 9 chr10 140295951 140296059 -5293229 + L2 LINE L2 2260 2367 -947 298 299 80 0 chr10 140296914 140297051 -5292237 - MER117 DNA MER1_type -49 148 1 203 340 100 0 chr10 140297055 140297155 -5292133 - MIR SINE MIR -70 138 29 1951 154 0 20 chr10 140297326 140297632 -5291656 + AluJb SINE Alu 5 304 -8 26 0 0 0 chr10 140297817 140297843 -5291445 + AT_rich Low_complexity Low_complexity 1 26 0 458 241 63 44 chr10 140297874 140298032 -5291256 - MIR SINE MIR -71 191 31 246 164 0 49 chr10 140299722 140299783 -5289505 + (TTATA)n Simple_repeat Simple_repeat 3 60 0 742 277 58 64 chr10 140300534 140300893 -5288395 + HAL1 LINE L1 2027 2384 -123 2277 118 46 96 chr10 140300893 140301350 -5287938 + Tigger2a DNA MER2_type 1 434 0 742 277 58 64 chr10 140301350 140301474 -5287814 + HAL1 LINE L1 2384 2507 0 2729 171 70 16 chr10 140302354 140302927 -5286361 - L1MC3 LINE L1 -14 7771 7168 1548 250 58 31 chr10 140302930 140303252 -5286036 - L1M4 LINE L1 -1199 4947 4599 1873 168 0 3 chr10 140303252 140303570 -5285718 - AluJb SINE Alu 0 317 1 1548 250 58 31 chr10 140303570 140303829 -5285459 - L1M4 LINE L1 -1547 4599 4349 1240 214 21 53 chr10 140303819 140304254 -5285034 - L1MCb LINE L1 -2845 3719 3299 * 1593 259 70 32 chr10 140304292 140304820 -5284468 + LTR26 LTR ERV1 54 601 -2 640 193 31 6 chr10 140304938 140305099 -5284189 - L1MCb LINE L1 -3269 3295 3131 4835 221 52 31 chr10 140305102 140305749 -5283539 - L1MCb LINE L1 -4851 1194 562 192 40 0 0 chr10 140305749 140305774 -5283514 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 4835 221 52 31 chr10 140305774 140306384 -5282904 - L1MCb LINE L1 -5483 562 342 2615 151 13 0 chr10 140306384 140306782 -5282506 - MER57A LTR ERV1 0 403 1 4835 221 52 31 chr10 140306782 140307132 -5282156 - L1MCb LINE L1 -5703 342 1 213 255 0 0 chr10 140307199 140307250 -5282038 - L2 LINE L2 -67 3246 3196 4150 114 11 57 chr10 140308918 140309596 -5279692 - LTR8 LTR ERV1 0 691 45 2847 7 0 0 chr10 140309942 140310245 -5279043 - AluYa5 SINE Alu -8 303 1 420 156 362 21 chr10 140310473 140310614 -5278674 - MER53 DNA DNA 0 189 1 6848 147 13 2 chr10 140310767 140312786 -5276502 + L1PB1 LINE L1 4103 6144 -7 2128 178 47 74 chr10 140312874 140313403 -5275885 + MLT2B1 LTR ERVL 3 517 -3 26 50 0 0 chr10 140314731 140314771 -5274517 + AT_rich Low_complexity Low_complexity 1 40 0 1145 234 33 66 chr10 140317592 140318106 -5271182 + MER72 LTR ERV1 4 481 -190 546 260 92 12 chr10 140318180 140318353 -5270935 + MER87 LTR ERV1 354 540 -1 911 171 123 5 chr10 140318353 140318540 -5270748 + MER49 LTR ERV1 715 923 0 498 212 30 45 chr10 140318525 140318556 -5270732 + MER58C DNA MER1_type 86 116 -2304 * 225 0 0 0 chr10 140318556 140318581 -5270707 + (CA)n Simple_repeat Simple_repeat 2 26 0 498 212 30 45 chr10 140318581 140318681 -5270607 + MER58C DNA MER1_type 116 215 0 241 235 0 20 chr10 140318682 140318733 -5270555 + L2 LINE L2 3255 3304 -9 392 281 0 0 chr10 140318936 140319025 -5270263 + MER34 LTR ERV1 1 89 -453 906 228 81 45 chr10 140319065 140319474 -5269814 + LTR29 LTR ERV1 182 633 -11 6498 157 33 28 chr10 140319514 140319692 -5269596 - Tigger3b DNA MER2_type -1799 1229 1053 5576 84 16 0 chr10 140319692 140320372 -5268916 - LTR8 LTR ERV1 0 691 1 6498 157 33 28 chr10 140320372 140320477 -5268811 - Tigger3b DNA MER2_type -1975 1053 950 1898 152 0 3 chr10 140320477 140320774 -5268514 - AluSq SINE Alu 0 313 18 6498 157 33 28 chr10 140320774 140320805 -5268483 - Tigger3b DNA MER2_type -2078 950 921 2531 111 8 39 chr10 140320805 140321191 -5268097 + THE1C LTR MaLR 1 374 -1 6498 157 33 28 chr10 140321191 140321771 -5267517 - Tigger3b DNA MER2_type -2107 921 323 1646 147 42 58 chr10 140321771 140322084 -5267204 - AluSx SINE Alu -4 308 1 6498 157 33 28 chr10 140322084 140322409 -5266879 - Tigger3b DNA MER2_type -2705 323 1 2486 128 11 22 chr10 140322604 140322972 -5266316 + THE1B LTR MaLR 1 364 0 299 337 71 6 chr10 140323398 140323567 -5265721 - L2 LINE L2 -289 2983 2804 370 293 72 33 chr10 140323718 140323899 -5265389 + MIR SINE MIR 50 237 -25 26 0 0 0 chr10 140323901 140323927 -5265361 + AT_rich Low_complexity Low_complexity 1 26 0 767 269 42 5 chr10 140323981 140324193 -5265095 - MIR SINE MIR -29 233 14 215 350 29 29 chr10 140324233 140324370 -5264918 - MIR SINE MIR -80 182 46 3572 146 4 0 chr10 140325493 140326053 -5263235 - L1PA13 LINE L1 -1953 4193 3632 7007 159 3 11 chr10 140326053 140328024 -5261264 + L1PA13 LINE L1 4191 6162 -1 1804 144 46 3 chr10 140328045 140328329 -5260959 - AluJb SINE Alu -16 296 1 1505 143 57 4 chr10 140328648 140328892 -5260396 + AluJb SINE Alu 1 257 -55 1147 137 0 75 chr10 140328892 140329104 -5260184 + AluSg/x SINE Alu 116 311 -1 1940 284 66 69 chr10 140329175 140329505 -5259783 - L1MEc LINE L1 -3883 2513 2184 363 23 0 0 chr10 140329505 140329549 -5259739 + (TG)n Simple_repeat Simple_repeat 1 44 0 1940 284 66 69 chr10 140329549 140330952 -5258336 - L1MEc LINE L1 -4212 2184 785 234 290 20 20 chr10 140331684 140331784 -5257504 - L1MEc LINE L1 -5921 284 185 1298 204 133 35 chr10 140331813 140332152 -5257136 + MLT1A2 LTR MaLR 3 374 0 201 305 97 7 chr10 140333070 140333224 -5256064 - MIR SINE MIR -14 248 81 296 271 136 8 chr10 140333662 140333780 -5255508 + L2 LINE L2 3132 3264 -8 2349 84 0 7 chr10 140334268 140334595 -5254693 - AluY SINE Alu 0 311 1 1762 87 4 9 chr10 140334598 140334829 -5254459 - AluSq SINE Alu -18 295 66 1881 138 3 52 chr10 140335986 140336291 -5252997 - AluSx SINE Alu -22 290 1 1706 181 0 7 chr10 140336374 140336662 -5252626 + AluJo SINE Alu 1 286 -26 629 251 40 111 chr10 140336786 140337091 -5252197 + MLT1J LTR MaLR 105 379 -132 3673 153 122 51 chr10 140337091 140337862 -5251426 + LTR1B LTR ERV1 1 826 0 629 251 40 111 chr10 140337862 140337934 -5251354 + MLT1J LTR MaLR 379 455 -56 2508 81 0 0 chr10 140338015 140338324 -5250964 + AluY SINE Alu 1 309 -2 213 244 0 0 chr10 140338798 140338843 -5250445 + (CATA)n Simple_repeat Simple_repeat 2 46 0 194 333 90 39 chr10 140339937 140340095 -5249193 + MIR3 SINE MIR 6 177 -31 432 166 10 83 chr10 140340557 140340750 -5248538 + CT-rich Low_complexity Low_complexity 1 179 0 363 195 5 87 chr10 140340771 140340966 -5248322 + CT-rich Low_complexity Low_complexity 1 179 0 283 203 16 80 chr10 140340988 140341175 -5248113 + CT-rich Low_complexity Low_complexity 4 178 0 444 241 35 43 chr10 140342679 140342795 -5246493 + MIR SINE MIR 20 134 -128 190 120 0 0 chr10 140342804 140342829 -5246459 + L2 LINE L2 3210 3234 -38 42 20 0 0 chr10 140342920 140342969 -5246319 + AT_rich Low_complexity Low_complexity 1 49 0 4676 172 22 20 chr10 140343092 140343236 -5246052 + L1MB7 LINE L1 5107 5249 -935 3376 79 37 9 chr10 140343236 140343668 -5245620 + MLT2A1 LTR ERVL 1 444 0 4676 172 22 20 chr10 140343668 140344598 -5244690 + L1MB7 LINE L1 5249 6184 0 343 362 50 18 chr10 140345165 140345383 -5243905 - MIR SINE MIR -19 243 19 2614 46 0 0 chr10 140347448 140347753 -5241535 + AluY SINE Alu 1 305 -6 493 333 25 92 chr10 140348661 140349061 -5240227 + L2 LINE L2 2850 3222 -50 226 330 48 0 chr10 140349915 140350018 -5239270 + MIR3 SINE MIR 96 203 -5 329 292 151 64 chr10 140350123 140350342 -5238946 + L2 LINE L2 3076 3313 0 2337 125 52 56 chr10 140351740 140352328 -5236960 + MER4A LTR ERV1 1 465 0 2098 189 18 20 chr10 140352369 140352765 -5236523 + MSTD LTR MaLR 2 396 0 9335 43 0 0 chr10 140352918 140354773 -5234515 + L1PA5 LINE L1 4299 6153 -1 22 0 0 0 chr10 140354773 140354795 -5234493 + AT_rich Low_complexity Low_complexity 1 22 0 219 154 0 26 chr10 140356729 140356768 -5232520 + GA-rich Low_complexity Low_complexity 4 41 0 2313 88 7 3 chr10 140357119 140357415 -5231873 + AluSq SINE Alu 1 297 -16 382 220 4 39 chr10 140358207 140358460 -5230828 + (CACCAT)n Simple_repeat Simple_repeat 1 244 0 401 259 46 0 chr10 140358924 140359032 -5230256 + MIR SINE MIR 86 198 -64 1628 173 3 46 chr10 140359384 140359708 -5229580 + AluJo SINE Alu 1 310 -2 700 304 65 48 chr10 140360721 140361119 -5228169 + MLT1J LTR MaLR 92 496 -15 324 286 104 104 chr10 140361266 140361304 -5227984 + L2 LINE L2 2989 3026 -246 1935 165 71 6 chr10 140361304 140361656 -5227632 + THE1C LTR MaLR 1 375 0 324 286 104 104 chr10 140361656 140361886 -5227402 + L2 LINE L2 3025 3257 -15 714 249 62 27 chr10 140363155 140363380 -5225908 - L2 LINE L2 0 3313 3081 648 244 0 6 chr10 140363640 140363800 -5225488 - Zaphod DNA AcHobo -30 4001 3843 335 225 123 65 chr10 140363804 140363942 -5225346 + LTR48B LTR ERV1 17 162 -482 635 176 80 62 chr10 140364002 140364400 -5224888 + LTR48 LTR ERV1 282 787 0 * 3396 213 83 29 chr10 140364400 140365547 -5223741 - Zaphod DNA AcHobo -223 3808 2600 3330 159 34 48 chr10 140365558 140366262 -5223026 + LTR8A LTR ERV1 34 727 0 261 160 40 0 chr10 140366272 140366322 -5222966 - Zaphod DNA AcHobo -1439 2592 2541 1100 286 24 3 chr10 140366347 140366686 -5222602 - Zaphod DNA AcHobo -3517 514 169 649 234 137 83 chr10 140366699 140367217 -5222071 - MER34C LTR ERV1 0 585 40 396 261 42 8 chr10 140367221 140367340 -5221948 - Zaphod DNA AcHobo -3906 125 3 470 219 37 70 chr10 140367537 140367631 -5221657 + MER4E LTR ERV1 1 97 -775 1876 139 28 7 chr10 140367631 140367919 -5221369 - AluJb SINE Alu -18 294 1 1897 116 137 21 chr10 140367919 140368255 -5221033 - THE1C LTR MaLR 0 375 1 470 219 37 70 chr10 140368255 140368341 -5220947 + MER4E LTR ERV1 95 284 -588 * 1490 170 24 101 chr10 140368339 140368438 -5220850 + MER4D LTR ERV1 547 652 -251 1786 153 22 42 chr10 140368438 140368751 -5220537 + AluJo SINE Alu 1 307 -5 1490 170 24 101 chr10 140368751 140369027 -5220261 + MER4D LTR ERV1 652 893 -10 207 337 119 0 chr10 140370148 140370249 -5219039 + MIR3 SINE MIR 61 173 -35 912 213 5 29 chr10 140370255 140370462 -5218826 - MER3 DNA MER1_type -7 202 1 188 61 0 30 chr10 140370724 140370757 -5218531 - MIR SINE MIR -73 135 104 341 268 116 32 chr10 140371378 140371552 -5217736 - MIR SINE MIR -61 147 2 345 207 0 0 chr10 140371608 140371690 -5217598 + T-rich Low_complexity Low_complexity 3 84 0 2065 127 40 0 chr10 140371696 140371996 -5217292 - AluSq SINE Alu -1 312 1 236 254 15 30 chr10 140372156 140372223 -5217065 - L2 LINE L2 -193 3079 3014 * 306 267 0 86 chr10 140372210 140372315 -5216973 + MIR SINE MIR 88 183 -79 2612 129 29 16 chr10 140372520 140372963 -5216325 - MER65C LTR ERV1 -12 449 1 230 184 61 0 chr10 140373392 140373441 -5215847 + MLT1F1 LTR MaLR 5 56 -511 621 268 14 0 chr10 140373453 140373595 -5215693 - MLT1C LTR MaLR -290 177 34 225 94 0 0 chr10 140373596 140373628 -5215660 + (T)n Simple_repeat Simple_repeat 1 32 0 3371 142 46 0 chr10 140373744 140374309 -5214979 - LTR43 LTR ERV1 0 602 12 1504 109 0 0 chr10 140374628 140374849 -5214439 - L1MA1 LINE L1 -4 6298 6078 283 308 60 34 chr10 140374853 140374970 -5214318 - L2 LINE L2 -10 3303 3184 1714 189 55 6 chr10 140375108 140375474 -5213814 + MLT1B LTR MaLR 2 385 -5 2025 141 47 16 chr10 140375757 140376187 -5213101 + MER51B LTR ERV1 1 377 0 623 155 243 0 chr10 140377413 140377561 -5211727 - MER53 DNA DNA -4 185 2 243 167 21 0 chr10 140378781 140378829 -5210459 - MER20 DNA MER1_type -37 182 134 988 231 14 9 chr10 140379180 140379396 -5209892 + MER20 DNA MER1_type 1 217 -2 315 0 0 0 chr10 140379588 140379623 -5209665 + (CA)n Simple_repeat Simple_repeat 2 36 0 22 35 0 0 chr10 140380401 140380430 -5208858 + AT_rich Low_complexity Low_complexity 1 29 0 4366 120 0 0 chr10 140381221 140381894 -5207394 - L1P LINE L1 -1168 4978 4306 6506 93 2 10 chr10 140381894 140382996 -5206292 + L1PA10 LINE L1 5051 6147 -21 207 0 0 0 chr10 140382996 140383019 -5206269 + (TTAAA)n Simple_repeat Simple_repeat 3 25 0 6506 93 2 10 chr10 140383019 140383041 -5206247 + L1PA10 LINE L1 6147 6168 0 1448 166 36 59 chr10 140383081 140383388 -5205900 - AluJb SINE Alu -12 300 1 742 241 70 11 chr10 140385008 140385195 -5204093 + MIR SINE MIR 39 236 -26 221 299 24 104 chr10 140385235 140385413 -5203875 - MIR3 SINE MIR -69 139 3 2107 134 62 14 chr10 140386128 140386486 -5202802 + THE1C LTR MaLR 1 375 0 231 36 0 0 chr10 140387883 140387911 -5201377 + (CA)n Simple_repeat Simple_repeat 2 29 0 360 318 172 28 chr10 140389250 140389971 -5199317 + L2 LINE L2 2223 3053 -219 182 170 85 85 chr10 140390603 140390650 -5198638 + L2 LINE L2 3220 3266 -6 23 68 0 0 chr10 140390719 140390763 -5198525 + AT_rich Low_complexity Low_complexity 1 44 0 775 151 0 16 chr10 140391131 140391328 -5197960 + AluSg/x SINE Alu 188 382 0 325 114 14 29 chr10 140391258 140391500 -5197788 + (GAAA)n Simple_repeat Simple_repeat 4 244 0 * 204 158 0 0 chr10 140391512 140391550 -5197738 + GA-rich Low_complexity Low_complexity 4 41 0 693 154 13 7 chr10 140391670 140391819 -5197469 + GA-rich Low_complexity Low_complexity 4 153 0 2667 38 0 6 chr10 140392309 140392622 -5196666 + AluY SINE Alu 1 311 0 183 229 0 0 chr10 140392803 140392838 -5196450 - L2 LINE L2 -96 3217 3183 225 366 54 9 chr10 140395391 140395503 -5193785 + L3 LINE CR1 242 358 -1219 1209 143 19 5 chr10 140396544 140396753 -5192535 + MER2 DNA MER2_type 1 212 -133 1468 187 47 7 chr10 140396818 140397118 -5192170 + AluJb SINE Alu 1 312 0 319 241 78 72 chr10 140397757 140397923 -5191365 - MER20B DNA MER1_type -17 766 600 789 300 9 5 chr10 140398032 140398252 -5191036 - MER58A DNA MER1_type -3 221 1 253 167 0 56 chr10 140398253 140398307 -5190981 - MIR3 SINE MIR -49 159 109 298 264 104 32 chr10 140398679 140398804 -5190484 - MER5C DNA MER1_type -169 155 22 1280 243 34 55 chr10 140399715 140400192 -5189096 - MLT1C LTR MaLR 0 467 1 1939 142 0 3 chr10 140400320 140400602 -5188686 + AluJo SINE Alu 1 281 -31 366 295 29 36 chr10 140401381 140401520 -5187768 + MIR SINE MIR 77 214 -48 2190 140 3 0 chr10 140401658 140401965 -5187323 - AluSx SINE Alu -4 308 1 1710 165 0 0 chr10 140402058 140402307 -5186981 + AluJb SINE Alu 17 265 -47 1499 124 36 0 chr10 140402322 140402571 -5186717 + L1MA8 LINE L1 6029 6286 -5 3116 196 44 47 chr10 140402603 140402665 -5186623 - L1MB8 LINE L1 -6 6172 6111 387 94 156 0 chr10 140402665 140402712 -5186576 - MADE1 DNA Mariner -2 78 17 2180 132 0 16 chr10 140402712 140403022 -5186266 + AluSx SINE Alu 1 305 -7 387 94 156 0 chr10 140403022 140403038 -5186250 - MADE1 DNA Mariner -63 17 5 3116 196 44 47 chr10 140403038 140403769 -5185519 - L1MB8 LINE L1 -67 6111 5381 1452 221 23 14 chr10 140404494 140404842 -5184446 + MLT1A1 LTR MaLR 1 351 -14 205 146 122 0 chr10 140404926 140404967 -5184321 - MIR3 SINE MIR -49 159 114 208 133 0 0 chr10 140404936 140404966 -5184322 - MIR SINE MIR -117 145 116 209 282 100 18 chr10 140406506 140406616 -5182672 - MIR3 SINE MIR -17 191 73 1663 178 13 73 chr10 140406711 140407189 -5182099 + LTR10B LTR ERV1 1 547 0 2277 179 110 57 chr10 140407454 140408034 -5181254 + LTR36 LTR ERV1 1 611 0 255 226 16 32 chr10 140408237 140408299 -5180989 + MER21B LTR ERV1 1 61 -802 236 111 0 0 chr10 140408291 140408327 -5180961 + MLT1A1 LTR MaLR 278 313 -52 * 2685 246 45 23 chr10 140408374 140409150 -5180138 + MER21B LTR ERV1 19 811 -52 396 277 233 19 chr10 140409559 140409830 -5179458 - MARNA DNA Mariner -99 487 159 228 294 68 41 chr10 140409842 140409988 -5179300 + L2 LINE L2 2958 3107 -165 2046 134 3 16 chr10 140410887 140411200 -5178088 + AluSx SINE Alu 2 310 -2 798 240 7 0 chr10 140411229 140411383 -5177905 + AluJb SINE Alu 137 291 -21 851 246 29 16 chr10 140411966 140412210 -5177078 + Charlie1a DNA MER1_type 1 247 -1208 5339 236 55 21 chr10 140412219 140414444 -5174844 - L1PBa LINE L1 -3569 3293 1811 486 0 0 0 chr10 140414444 140414498 -5174790 + (TC)n Simple_repeat Simple_repeat 1 54 0 5339 236 55 21 chr10 140414498 140416368 -5172920 - L1PBa LINE L1 -5051 1811 7 281 362 22 0 chr10 140416688 140416826 -5172462 + MIR SINE MIR 48 188 -74 222 308 106 0 chr10 140417958 140418062 -5171226 + MIR SINE MIR 16 130 -78 337 257 164 29 chr10 140418232 140418372 -5170916 - MIR SINE MIR -81 181 23 1360 205 67 7 chr10 140422606 140422889 -5166399 - AluJb SINE Alu -12 300 1 330 235 160 25 chr10 140422934 140423053 -5166235 + MIR SINE MIR 15 149 -113 872 187 12 66 chr10 140423054 140423295 -5165993 + L1MB8 LINE L1 5951 6178 0 193 351 80 26 chr10 140423938 140424089 -5165199 + MIR3 SINE MIR 35 193 -15 613 293 56 56 chr10 140425044 140425471 -5163817 + MLT1K LTR MaLR 86 512 -76 409 168 143 75 chr10 140425924 140426085 -5163203 - MER63A DNA MER1_type -37 173 2 363 220 0 0 chr10 140426748 140426839 -5162449 + (TG)n Simple_repeat Simple_repeat 1 91 0 203 291 0 18 chr10 140426854 140426909 -5162379 + L2 LINE L2 3209 3262 -10 496 335 12 6 chr10 140428780 140428953 -5160335 - L3 LINE CR1 -162 1415 1242 1698 144 3 70 chr10 140429061 140429258 -5160030 - AluJb SINE Alu 0 312 142 2357 85 3 0 chr10 140429258 140429551 -5159737 - AluSp SINE Alu -19 294 1 1698 144 3 70 chr10 140429551 140429666 -5159622 - AluJb SINE Alu -170 142 21 2190 102 0 3 chr10 140430467 140430782 -5158506 - AluSx SINE Alu 0 314 1 256 259 25 37 chr10 140432404 140432485 -5156803 - MIR SINE MIR -76 186 107 347 333 44 60 chr10 140432753 140432843 -5156445 - MIR SINE MIR -1 261 171 519 223 18 0 chr10 140432843 140432955 -5156333 + MER81 DNA DNA 1 114 0 347 333 44 60 chr10 140432955 140433116 -5156172 - MIR SINE MIR -91 171 14 2702 96 3 8 chr10 140433595 140433961 -5155327 + THE1B LTR MaLR 1 364 0 740 220 84 44 chr10 140433965 140434215 -5155073 - L1ME3A LINE L1 -9 6161 5902 210 200 25 0 chr10 140434227 140434267 -5155021 - L2 LINE L2 -17 3296 3256 342 0 0 0 chr10 140434322 140434360 -5154928 + (TG)n Simple_repeat Simple_repeat 2 39 0 204 284 159 11 chr10 140435003 140435091 -5154197 + MIR SINE MIR 103 203 -59 330 248 57 29 chr10 140437820 140437925 -5151363 - MER5B DNA MER1_type -2 176 69 1281 173 19 0 chr10 140438071 140438285 -5151003 + AluJb SINE Alu 82 299 -13 2067 107 0 0 chr10 140438289 140438550 -5150738 + AluSx SINE Alu 2 262 -50 185 0 40 0 chr10 140438573 140438598 -5150690 + (CAA)n Simple_repeat Simple_repeat 2 27 0 257 299 140 9 chr10 140439033 140439140 -5150148 + L2 LINE L2 3143 3263 -9 241 319 69 27 chr10 140440421 140440609 -5148679 - L1ME3A LINE L1 -357 5764 5569 349 50 0 175 chr10 140441065 140441145 -5148143 + MADE1 DNA Mariner 1 66 -14 430 316 64 5 chr10 140441149 140441336 -5147952 + L2 LINE L2 3112 3309 -4 571 261 77 42 chr10 140441370 140441630 -5147658 - L1ME LINE L1 -370 5751 5483 21 0 0 0 chr10 140441832 140441853 -5147435 + AT_rich Low_complexity Low_complexity 1 21 0 2114 169 34 31 chr10 140441910 140442324 -5146964 - MSTC LTR MaLR 0 428 14 455 313 129 38 chr10 140442452 140442948 -5146340 - L1MC/D LINE L1 -324 5797 5255 2118 217 13 49 chr10 140443081 140443978 -5145310 - L1ME LINE L1 -489 5677 4812 758 311 61 31 chr10 140443990 140444466 -5144822 - L1MEc LINE L1 -5866 530 41 641 259 94 41 chr10 140444494 140444961 -5144327 - HAL1b LINE L1 -853 495 4 318 231 58 0 chr10 140446231 140446352 -5142936 + MER113 DNA MER1_type? 1 128 -393 216 0 0 0 chr10 140446612 140446636 -5142652 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 257 212 45 0 chr10 140447610 140447676 -5141612 + L1ME2 LINE L1 5665 5733 -2075 1614 201 3 26 chr10 140447677 140447990 -5141298 + AluJb SINE Alu 7 312 0 702 276 70 48 chr10 140448027 140448497 -5140791 + L1M4c LINE L1 930 1523 -4859 1628 195 33 16 chr10 140448497 140448800 -5140488 + AluJo SINE Alu 4 311 -1 702 276 70 48 chr10 140448800 140448889 -5140399 + L1M4c LINE L1 1523 1609 -4773 775 252 40 34 chr10 140448891 140449189 -5140099 + L1ME2 LINE L1 5825 6124 -40 2439 112 42 22 chr10 140449555 140449912 -5139376 - THE1B LTR MaLR 0 364 1 207 0 0 0 chr10 140450060 140450083 -5139205 + (T)n Simple_repeat Simple_repeat 1 23 0 23 54 0 0 chr10 140453099 140453136 -5136152 + GC_rich Low_complexity Low_complexity 1 37 0 30 0 0 0 chr10 140453324 140453354 -5135934 + GC_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr10 140453680 140453708 -5135580 + GC_rich Low_complexity Low_complexity 1 28 0 256 332 83 21 chr10 140455339 140455532 -5133756 + L2 LINE L2 2234 2438 -876 247 303 28 35 chr10 140456159 140456301 -5132987 + L2 LINE L2 2950 3090 -182 317 263 237 25 chr10 140456427 140456625 -5132663 + MIR SINE MIR 19 258 -4 1705 184 14 7 chr10 140456683 140456977 -5132311 + AluJb SINE Alu 1 296 -16 190 314 57 0 chr10 140457423 140457493 -5131795 + MIR3 SINE MIR 110 183 -25 2561 145 34 7 chr10 140459820 140460233 -5129055 + MSTB LTR MaLR 3 426 0 382 276 0 0 chr10 140461752 140461839 -5127449 + Tigger5 DNA MER2_type 2237 2323 0 212 287 35 78 chr10 140461839 140461945 -5127343 - L2 LINE L2 -35 3237 3137 2469 89 15 63 chr10 140462030 140462424 -5126864 + THE1C LTR MaLR 1 375 0 201 316 139 11 chr10 140462471 140462658 -5126630 - L2 LINE L2 -304 2968 2760 230 288 0 12 chr10 140462663 140462743 -5126545 - Charlie4 DNA MER1_type 0 1961 1883 1778 140 62 0 chr10 140463281 140463553 -5125735 + AluJo SINE Alu 1 289 -23 2113 131 3 0 chr10 140463629 140463919 -5125369 + AluSx SINE Alu 1 291 -21 2399 85 0 3 chr10 140464158 140464465 -5124823 + AluY SINE Alu 1 306 -5 236 327 142 6 chr10 140466577 140466739 -5122549 - MLT1K LTR MaLR -1 587 404 316 210 72 87 chr10 140467061 140467199 -5122089 - MIR SINE MIR -22 240 105 340 296 40 20 chr10 140467530 140467682 -5121606 - MER5B DNA MER1_type -17 161 7 202 260 120 50 chr10 140468100 140468200 -5121088 - L2 LINE L2 0 3272 3166 2158 93 0 0 chr10 140469280 140469548 -5119740 - AluSg SINE Alu -7 303 36 2071 140 0 16 chr10 140470102 140470410 -5118878 - AluSg SINE Alu -7 303 1 926 239 100 8 chr10 140470965 140471225 -5118063 - MLT1F LTR MaLR -177 365 82 2412 116 0 0 chr10 140472681 140472991 -5116297 - AluSg SINE Alu 0 310 1 305 336 35 9 chr10 140473348 140473475 -5115813 - MIR SINE MIR -63 145 17 21 36 0 0 chr10 140475208 140475236 -5114052 + AT_rich Low_complexity Low_complexity 1 28 0 307 275 38 12 chr10 140475518 140475598 -5113690 + Charlie4 DNA MER1_type 4 85 -1876 2256 133 0 16 chr10 140475657 140475974 -5113314 + AluSx SINE Alu 1 312 0 2550 207 56 61 chr10 140475995 140476662 -5112626 - L1ME1 LINE L1 -4 6162 5498 2410 97 0 6 chr10 140476662 140476973 -5112315 - AluSc SINE Alu 0 309 1 2550 207 56 61 chr10 140476973 140477139 -5112149 - L1ME1 LINE L1 -668 5498 5333 290 246 157 0 chr10 140477139 140477273 -5112015 + Charlie4 DNA MER1_type 1807 1961 0 1055 251 75 39 chr10 140478881 140479292 -5109996 - MLT1E3 LTR MaLR -197 427 2 202 311 205 0 chr10 140479824 140479946 -5109342 + MIR SINE MIR 7 153 -109 288 0 0 0 chr10 140480065 140480097 -5109191 + (CA)n Simple_repeat Simple_repeat 1 32 0 267 302 0 12 chr10 140483441 140483527 -5105761 - MIR3 SINE MIR -8 200 116 2258 125 0 0 chr10 140483617 140483920 -5105368 + AluSx SINE Alu 1 303 -9 183 156 0 0 chr10 140483934 140483966 -5105322 + (TG)n Simple_repeat Simple_repeat 2 33 0 527 219 0 0 chr10 140484495 140484591 -5104697 + FLAM_A SINE Alu 1 96 -46 275 330 12 17 chr10 140485834 140486007 -5103281 + (CAGGG)n Simple_repeat Simple_repeat 3 174 0 * 278 130 118 71 chr10 140485942 140486111 -5103177 + (CAGG)n Simple_repeat Simple_repeat 4 180 0 716 207 0 0 chr10 140486727 140486848 -5102440 - FLAM_A SINE Alu -12 121 1 202 304 206 0 chr10 140486901 140487003 -5102285 + L2 LINE L2 3136 3258 -14 530 292 111 27 chr10 140487416 140487714 -5101574 - MER102b DNA MER1_type -15 326 4 2377 180 16 0 chr10 140488512 140488946 -5100342 + L1MB3 LINE L1 5743 6183 0 1197 108 13 0 chr10 140490379 140490620 -5098668 + (TGGA)n Simple_repeat Simple_repeat 1 245 0 682 301 122 29 chr10 140490620 140491062 -5098226 - L2 LINE L2 -464 2850 2368 211 326 123 51 chr10 140491104 140491242 -5098046 + L2 LINE L2 3125 3272 0 320 382 52 28 chr10 140492422 140492634 -5096654 + L1MC4a LINE L1 5675 5891 -1917 1705 164 46 0 chr10 140492797 140493078 -5096210 + AluJb SINE Alu 5 298 -14 275 143 14 86 chr10 140493959 140494029 -5095259 + MLT2B3 LTR ERVL 444 508 -46 665 152 32 8 chr10 140494310 140494435 -5094853 - L1MC1 LINE L1 -2 6331 6204 2370 153 15 0 chr10 140494436 140494835 -5094453 - L1MC1 LINE L1 -174 6159 5755 2058 206 40 80 chr10 140494837 140495414 -5093874 + MLT2B3 LTR ERVL 1 554 0 12063 165 38 9 chr10 140495414 140496891 -5092397 + ERVL LTR ERVL 1 1716 -4048 2095 93 69 3 chr10 140496891 140497182 -5092106 + AluY SINE Alu 1 310 -1 12063 165 38 9 chr10 140497182 140498273 -5091015 + ERVL LTR ERVL 1716 2774 -2990 17841 138 32 15 chr10 140498901 140501350 -5087938 + ERVL LTR ERVL 2770 5174 -590 465 90 0 0 chr10 140501350 140501417 -5087871 + (CATA)n Simple_repeat Simple_repeat 2 68 0 17841 138 32 15 chr10 140501417 140502271 -5087017 + ERVL LTR ERVL 5174 5764 0 1388 141 69 41 chr10 140501745 140501760 -5087528 + Ricksha DNA DNA 185 198 -1848 * 1741 152 193 11 chr10 140501760 140502122 -5087166 - MSTA LTR MaLR 0 428 1 1388 141 69 41 chr10 140502122 140502396 -5086892 + Ricksha DNA DNA 198 482 -1564 933 153 23 23 chr10 140502381 140502557 -5086731 + Ricksha DNA DNA 728 903 -1143 * 2668 176 15 10 chr10 140502557 140503494 -5085794 - L1MC1 LINE L1 -584 5749 4807 363 273 55 8 chr10 140503501 140503629 -5085659 - L1MC1 LINE L1 -1898 4248 4115 4488 237 28 18 chr10 140503669 140504961 -5084327 - L1M4 LINE L1 -1387 4759 3455 2417 95 3 0 chr10 140504968 140505272 -5084016 - AluSp SINE Alu -8 305 1 249 119 0 0 chr10 140505379 140505421 -5083867 + (TTCA)n Simple_repeat Simple_repeat 3 44 0 513 299 63 5 chr10 140505749 140505956 -5083332 + MIR SINE MIR 10 228 -34 2275 68 20 7 chr10 140506817 140507109 -5082179 + AluY SINE Alu 1 296 -15 283 167 0 103 chr10 140507605 140507683 -5081605 + AluJo SINE Alu 84 153 -149 362 299 58 82 chr10 140507899 140508314 -5080974 - L1ME3 LINE L1 0 6162 5758 741 187 147 0 chr10 140508316 140508466 -5080822 - FRAM SINE Alu -12 164 1 2092 94 24 3 chr10 140508483 140508771 -5080517 + AluSc SINE Alu 1 294 -15 291 290 78 56 chr10 140509405 140509636 -5079652 + L2 LINE L2 3078 3313 0 524 238 104 40 chr10 140510395 140510597 -5078691 + MER20 DNA MER1_type 5 219 0 684 104 88 32 chr10 140510988 140511113 -5078175 + AluJb SINE Alu 181 312 0 228 67 0 0 chr10 140512573 140512603 -5076685 + (CA)n Simple_repeat Simple_repeat 2 31 0 180 328 45 30 chr10 140513037 140513104 -5076184 - MIR SINE MIR -59 149 82 601 280 65 27 chr10 140513774 140514035 -5075253 + MER102b DNA MER1_type 68 338 -3 443 132 13 13 chr10 140516184 140516260 -5073028 + MER5A DNA MER1_type 1 76 -113 2014 158 3 0 chr10 140518829 140519126 -5070162 + AluSx SINE Alu 1 298 -14 183 279 206 0 chr10 140519963 140520031 -5069257 + L2 LINE L2 3222 3303 -10 349 332 15 8 chr10 140521732 140521929 -5067359 + MIR SINE MIR 1 260 -2 268 227 30 15 chr10 140523720 140523786 -5065502 - MIR SINE MIR -110 152 86 248 280 91 86 chr10 140523944 140524130 -5065158 + L2 LINE L2 3079 3265 -7 215 238 48 0 chr10 140524290 140524353 -5064935 + MIR SINE MIR 112 177 -85 24 32 0 0 chr10 140524820 140524851 -5064437 + AT_rich Low_complexity Low_complexity 1 31 0 361 245 68 27 chr10 140525297 140525465 -5063823 + MIR SINE MIR 58 234 -28 187 77 26 26 chr10 140527653 140527692 -5061596 + (CAAAA)n Simple_repeat Simple_repeat 5 43 0 1884 151 3 22 chr10 140527702 140528013 -5061275 + AluJo SINE Alu 3 307 -5 190 250 125 0 chr10 140528103 140528175 -5061113 + MIR SINE MIR 64 144 -118 2312 115 0 10 chr10 140528182 140528496 -5060792 + AluSx SINE Alu 1 311 -1 914 145 0 0 chr10 140528963 140529087 -5060201 + AluJb SINE Alu 126 249 -63 918 247 60 11 chr10 140529734 140530082 -5059206 - L1M4 LINE L1 -1767 4379 4015 23 86 0 0 chr10 140530163 140530221 -5059067 + AT_rich Low_complexity Low_complexity 1 58 0 2211 157 11 26 chr10 140530490 140530948 -5058340 + L1MB7 LINE L1 5734 6184 0 2250 104 3 13 chr10 140530979 140531278 -5058010 + AluSx SINE Alu 1 296 -16 375 23 0 0 chr10 140531930 140531974 -5057314 + (TG)n Simple_repeat Simple_repeat 1 44 0 2447 97 3 0 chr10 140533514 140533824 -5055464 - AluSp SINE Alu -2 311 1 1869 112 55 35 chr10 140534006 140534354 -5054934 + THE1A LTR MaLR 1 355 0 2348 116 0 3 chr10 140534744 140535054 -5054234 + AluSx SINE Alu 1 309 -3 2264 114 0 0 chr10 140535252 140535550 -5053738 + AluSx SINE Alu 1 298 -14 2135 142 3 0 chr10 140537737 140538048 -5051240 - AluSx SINE Alu 0 312 1 200 306 83 0 chr10 140540536 140540608 -5048680 - MIR SINE MIR -153 109 32 2073 119 6 38 chr10 140541716 140542036 -5047252 - AluJb SINE Alu -2 310 1 184 191 21 21 chr10 140543421 140543468 -5045820 - MER5A DNA MER1_type -136 53 7 2188 108 3 3 chr10 140544436 140544732 -5044556 - AluSq SINE Alu -17 296 1 371 239 76 7 chr10 140546118 140546270 -5043018 + L1 LINE L1 4798 4976 -1170 844 271 78 59 chr10 140546344 140547057 -5042231 + L1ME3A LINE L1 4965 5701 -469 1426 103 18 0 chr10 140547057 140547280 -5042008 + L1PA8 LINE L1 5943 6169 -3 844 271 78 59 chr10 140547280 140547536 -5041752 + L1ME3A LINE L1 5701 5951 -219 3715 141 13 60 chr10 140547598 140547879 -5041409 + L1MB7 LINE L1 5451 5744 -440 2271 99 0 3 chr10 140547879 140548172 -5041116 - AluSx SINE Alu -15 297 6 3715 141 13 60 chr10 140548172 140548655 -5040633 + L1MB7 LINE L1 5744 6179 -5 1130 219 17 20 chr10 140549755 140550047 -5039241 + AluSx SINE Alu 3 293 -9 200 212 15 0 chr10 140551617 140551683 -5037605 + CT-rich Low_complexity Low_complexity 2 68 0 485 302 81 26 chr10 140555030 140555338 -5033950 - L2 LINE L2 -568 2746 2422 189 348 109 36 chr10 140555432 140555570 -5033718 + L2 LINE L2 3125 3272 0 2514 66 10 3 chr10 140560709 140561013 -5028275 + AluY SINE Alu 1 306 -5 333 155 0 0 chr10 140561823 140561881 -5027407 + (CA)n Simple_repeat Simple_repeat 1 58 0 216 0 0 0 chr10 140562246 140562270 -5027018 + (TGAA)n Simple_repeat Simple_repeat 3 26 0 452 341 36 9 chr10 140562542 140562765 -5026523 - MIR SINE MIR -33 229 1 725 196 0 0 chr10 140563091 140563224 -5026064 - FLAM_C SINE Alu 0 133 1 2688 26 7 3 chr10 140563226 140563531 -5025757 - AluY SINE Alu -5 306 1 2388 104 0 3 chr10 140564124 140564433 -5024855 - AluSp SINE Alu 0 313 6 2071 125 0 35 chr10 140564480 140564791 -5024497 - AluSq SINE Alu -13 300 1 2406 83 3 10 chr10 140565766 140566078 -5023210 - AluY SINE Alu -1 310 1 33 0 0 0 chr10 140566078 140566111 -5023177 + AT_rich Low_complexity Low_complexity 1 33 0 713 112 0 0 chr10 140566111 140566209 -5023079 - AluSg/x SINE Alu -36 274 177 3899 91 59 54 chr10 140566209 140566816 -5022472 + LTR66 LTR ERVL 1 610 0 1458 103 0 0 chr10 140566816 140567001 -5022287 - AluSq SINE Alu -128 185 1 300 270 144 63 chr10 140567025 140567185 -5022103 - L1ME3A LINE L1 -203 5967 5783 1751 188 7 7 chr10 140567185 140567494 -5021794 + AluJo SINE Alu 2 310 -2 300 270 144 63 chr10 140567494 140567555 -5021733 - L1ME3A LINE L1 -387 5783 5728 239 246 30 75 chr10 140567556 140567690 -5021598 - L1M4 LINE L1 -3383 2763 2636 255 93 0 0 chr10 140568443 140568486 -5020802 + (TTAG)n Simple_repeat Simple_repeat 2 44 0 1017 42 21 7 chr10 140568643 140568786 -5020502 + (GAAA)n Simple_repeat Simple_repeat 2 146 0 2331 98 0 0 chr10 140569156 140569451 -5019837 + AluSg SINE Alu 1 295 -15 2460 70 3 0 chr10 140571049 140571347 -5017941 + AluSx SINE Alu 1 299 -13 623 194 48 145 chr10 140571362 140571730 -5017558 - L1MC5 LINE L1 -100 7861 7532 2926 10 0 0 chr10 140571730 140572043 -5017245 - AluYb8 SINE Alu -5 313 1 623 194 48 145 chr10 140572043 140572066 -5017222 - L1MC5 LINE L1 -429 7532 7508 * 2409 242 42 30 chr10 140572060 140572807 -5016481 - L1ME2 LINE L1 0 6233 5478 263 247 55 0 chr10 140572807 140572880 -5016408 - L1ME2 LINE L1 -4706 1690 1614 2152 131 28 31 chr10 140572881 140573241 -5016047 - THE1B LTR MaLR -4 360 2 2224 119 0 0 chr10 140573716 140574001 -5015287 + AluSx SINE Alu 1 285 -27 1397 251 78 97 chr10 140574017 140574497 -5014791 - L1MC5 LINE L1 -463 7498 7010 2335 151 46 5 chr10 140574497 140574908 -5014380 - MSTA LTR MaLR 0 428 1 1397 251 78 97 chr10 140574908 140575433 -5013855 - L1MC5 LINE L1 -951 7010 6499 1352 176 129 32 chr10 140575433 140575813 -5013475 + LTR52 LTR ERVL 5 421 0 1397 251 78 97 chr10 140575813 140576251 -5013037 - L1MC5 LINE L1 -1462 6499 6054 194 261 76 0 chr10 140576579 140576671 -5012617 - L2 LINE L2 -340 2974 2876 2223 132 0 0 chr10 140576786 140577097 -5012191 + AluSx SINE Alu 1 311 -1 2166 122 0 28 chr10 140577362 140577682 -5011606 - AluSx SINE Alu -1 311 1 1028 64 0 8 chr10 140577691 140577816 -5011472 - AluY SINE Alu -187 124 1 202 73 59 44 chr10 140578025 140578093 -5011195 + T-rich Low_complexity Low_complexity 3 71 0 379 202 88 35 chr10 140578094 140578208 -5011080 - L1MA10 LINE L1 0 6334 6215 432 216 27 27 chr10 140578906 140579017 -5010271 + FLAM_A SINE Alu 16 126 -16 2068 144 0 13 chr10 140579020 140579326 -5009962 + AluSx SINE Alu 1 302 -10 185 238 48 0 chr10 140579411 140579453 -5009835 + L2 LINE L2 3136 3179 -93 402 308 38 14 chr10 140579588 140579799 -5009489 + MER20 DNA MER1_type 4 219 0 1742 153 36 0 chr10 140580325 140580606 -5008682 + AluSg SINE Alu 1 291 -19 2463 76 0 0 chr10 140582352 140582653 -5006635 - AluSc SINE Alu -8 301 1 189 198 48 0 chr10 140583320 140583446 -5005842 + (TA)n Simple_repeat Simple_repeat 1 132 0 378 184 61 12 chr10 140583482 140583645 -5005643 + (TA)n Simple_repeat Simple_repeat 1 171 0 446 279 37 12 chr10 140584115 140584276 -5005012 - MIR SINE MIR -70 192 28 2111 102 3 17 chr10 140584502 140584820 -5004468 - AluSx SINE Alu 0 312 1 569 279 76 0 chr10 140584820 140584992 -5004296 + MER58A DNA MER1_type 40 224 0 2050 122 10 23 chr10 140585147 140585451 -5003837 + AluSx SINE Alu 1 300 -12 1990 116 3 66 chr10 140585648 140585966 -5003322 - AluJo SINE Alu -12 300 3 657 231 89 38 chr10 140586100 140586353 -5002935 - MIR SINE MIR -1 261 1 180 260 202 10 chr10 140589016 140589120 -5000168 - L2 LINE L2 -3 3310 3187 23 0 0 0 chr10 140591646 140591669 -4997619 + AT_rich Low_complexity Low_complexity 1 23 0 390 58 19 0 chr10 140602303 140602355 -4986933 - Alu SINE Alu -248 53 1 2200 129 3 0 chr10 140607863 140608173 -4981115 + AluSq SINE Alu 1 311 -2 424 248 158 35 chr10 140608905 140609159 -4980129 - MER5C DNA MER1_type -3 321 37 2469 90 0 0 chr10 140609354 140609655 -4979633 + AluSg SINE Alu 1 301 -9 2335 107 0 3 chr10 140611447 140611777 -4977511 + AluSx SINE Alu 1 312 0 581 204 60 36 chr10 140611877 140612158 -4977130 + L1MDa LINE L1 2536 2829 -3711 348 293 73 19 chr10 140612197 140612511 -4976777 + L1MDa LINE L1 2631 2961 -3579 429 74 74 37 chr10 140612569 140612732 -4976556 + (TA)n Simple_repeat Simple_repeat 2 170 0 240 115 65 36 chr10 140612704 140612843 -4976445 + (TATAA)n Simple_repeat Simple_repeat 5 147 0 * 225 222 74 37 chr10 140612868 140612976 -4976312 + L1MDa LINE L1 3065 3176 -3364 * 273 201 123 88 chr10 140612954 140613191 -4976097 + L1ME3A LINE L1 6118 6344 -212 263 252 107 82 chr10 140613233 140613345 -4975943 + L1ME3A LINE L1 6346 6467 -97 1829 185 42 11 chr10 140613345 140613723 -4975565 - MLT1B LTR MaLR 0 390 1 263 252 107 82 chr10 140613723 140613816 -4975472 + L1ME3A LINE L1 6467 6556 -8 340 225 125 0 chr10 140614832 140614952 -4974336 + MIR SINE MIR 112 246 -16 534 247 137 5 chr10 140615560 140615750 -4973538 - MER20 DNA MER1_type -4 215 1 314 309 170 53 chr10 140615816 140616192 -4973096 - L2 LINE L2 -22 3250 2831 189 0 0 0 chr10 140616968 140616989 -4972299 + (CCCG)n Simple_repeat Simple_repeat 4 24 0 1845 127 33 0 chr10 140617380 140617680 -4971608 + AluJb SINE Alu 1 310 -2 252 313 89 27 chr10 140617799 140618023 -4971265 - L1MC4a LINE L1 -1888 5920 5683 1443 233 131 18 chr10 140618243 140618685 -4970603 + Charlie1b DNA MER1_type 24 515 -8 2097 118 7 0 chr10 140619004 140619426 -4969862 + AluSg SINE Alu 1 424 0 1255 127 0 29 chr10 140619483 140619688 -4969600 - AluSg/x SINE Alu -12 298 100 1053 131 0 0 chr10 140619688 140619841 -4969447 - AluSg/x SINE Alu -18 292 140 282 116 0 0 chr10 140619847 140619866 -4969422 + (TG)n Simple_repeat Simple_repeat 1 62 0 282 116 0 0 chr10 140619866 140619909 -4969379 + (TG)n Simple_repeat Simple_repeat 2 44 0 502 58 0 130 chr10 140619930 140620137 -4969151 + (TA)n Simple_repeat Simple_repeat 1 180 0 1422 251 78 97 chr10 140620617 140621055 -4968233 + L1MC5 LINE L1 6054 6499 -1462 1372 176 129 32 chr10 140621055 140621435 -4967853 - LTR52 LTR ERVL 0 421 5 1422 251 78 97 chr10 140621435 140621960 -4967328 + L1MC5 LINE L1 6499 7010 -951 2347 151 46 5 chr10 140621960 140622371 -4966917 + MSTA LTR MaLR 1 428 0 1422 251 78 97 chr10 140622371 140622851 -4966437 + L1MC5 LINE L1 7010 7498 -463 2095 119 0 0 chr10 140622867 140623152 -4966136 - AluSx SINE Alu -27 285 1 2160 133 25 28 chr10 140623627 140623987 -4965301 + THE1B LTR MaLR 2 360 -4 262 247 55 0 chr10 140623988 140624061 -4965227 + L1ME2 LINE L1 1614 1690 -4706 2403 246 40 28 chr10 140624061 140624808 -4964480 + L1ME2 LINE L1 5478 6233 0 701 198 45 145 chr10 140624802 140624825 -4964463 + L1MC5 LINE L1 7508 7532 -429 * 2785 10 0 0 chr10 140624825 140625138 -4964150 + AluYb8 SINE Alu 1 313 -5 701 198 45 145 chr10 140625138 140625521 -4963767 + L1MC5 LINE L1 7532 7867 -94 1971 99 24 0 chr10 140625521 140625813 -4963475 - AluSx SINE Alu -13 299 1 701 198 45 145 chr10 140625813 140625854 -4963434 + L1MC5 LINE L1 7867 7911 -50 332 192 0 106 chr10 140626163 140626267 -4963021 + Charlie8 DNA MER1_type 88 180 -2237 250 268 6 39 chr10 140626403 140626582 -4962706 + C-rich Low_complexity Low_complexity 3 175 0 399 131 0 0 chr10 140627357 140627418 -4961870 + L1PA13 LINE L1 6084 6144 -19 2877 277 125 60 chr10 140627553 140628345 -4960943 - HAL1 LINE L1 0 2507 1768 2009 111 0 4 chr10 140628345 140628624 -4960664 + AluSq SINE Alu 1 278 -35 243 0 0 0 chr10 140628630 140628657 -4960631 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2877 277 125 60 chr10 140628657 140629886 -4959402 - HAL1 LINE L1 -743 1764 346 464 300 97 53 chr10 140630013 140630190 -4959098 - HAL1 LINE L1 -2186 321 128 1699 163 0 33 chr10 140630190 140630497 -4958791 - AluJb SINE Alu -15 297 1 464 300 97 53 chr10 140630497 140630566 -4958722 - HAL1 LINE L1 -2379 128 64 5555 169 36 18 chr10 140631758 140631904 -4957384 - L1MC2 LINE L1 -10 6334 6192 2198 73 7 0 chr10 140631904 140632210 -4957078 - AluSp SINE Alu 0 308 1 5555 169 36 18 chr10 140632210 140633254 -4956034 - L1MC2 LINE L1 -152 6192 5122 452 220 121 23 chr10 140635322 140635454 -4953834 + MIR SINE MIR 118 262 0 1650 182 64 27 chr10 140635869 140636243 -4953045 - MLT1B LTR MaLR -2 388 1 2212 117 0 0 chr10 140639222 140639530 -4949758 - AluSx SINE Alu -4 308 1 271 216 0 0 chr10 140640026 140640077 -4949211 + MIR SINE MIR 98 148 -114 492 314 65 0 chr10 140640387 140640556 -4948732 + MIR SINE MIR 31 210 -52 721 227 44 36 chr10 140641409 140641660 -4947628 + L1MC5 LINE L1 7252 7504 -457 183 167 0 0 chr10 140641669 140641711 -4947577 + GA-rich Low_complexity Low_complexity 2 43 0 440 246 77 93 chr10 140641718 140642031 -4947257 + L1MC5 LINE L1 7494 7801 -160 33 25 0 0 chr10 140643520 140643560 -4945728 + AT_rich Low_complexity Low_complexity 1 40 0 3824 100 50 9 chr10 140643560 140644118 -4945170 - L1PA10 LINE L1 0 6168 5588 732 212 60 0 chr10 140645095 140645246 -4944042 - FRAM SINE Alu -16 160 1 857 179 73 62 chr10 140646988 140647173 -4942115 - MER58B DNA MER1_type -2087 333 143 2119 82 0 0 chr10 140647173 140647442 -4941846 - AluSx SINE Alu -21 291 23 857 179 73 62 chr10 140647442 140647587 -4941701 - MER58B DNA MER1_type -2277 143 1 608 281 24 12 chr10 140647876 140648043 -4941245 - L2 LINE L2 -1 3312 3144 1966 146 3 3 chr10 140648050 140648359 -4940929 - AluSq SINE Alu -4 309 1 207 100 0 0 chr10 140648472 140648502 -4940786 + (TTCC)n Simple_repeat Simple_repeat 1 30 0 332 272 79 26 chr10 140648669 140648783 -4940505 + LTR16C LTR ERVL 142 261 -230 207 295 26 51 chr10 140648801 140648879 -4940409 + MIR SINE MIR 100 175 -87 384 157 22 79 chr10 140648886 140648975 -4940313 - MLT1D LTR MaLR 0 505 422 1018 159 75 107 chr10 140649671 140649923 -4939365 + MSTB1 LTR MaLR 1 244 -188 849 189 36 81 chr10 140649925 140650147 -4939141 - AluJo SINE Alu -100 212 1 195 292 11 67 chr10 140650182 140650271 -4939017 - MIR SINE MIR 0 262 179 893 234 49 32 chr10 140650271 140650638 -4938650 + MLT1D LTR MaLR 1 414 -91 1695 188 3 0 chr10 140650640 140650949 -4938339 - AluJb SINE Alu -2 310 1 4628 61 41 3 chr10 140651265 140651851 -4937437 - LTR14B LTR ERVK 0 608 1 23 0 0 0 chr10 140652101 140652124 -4937164 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr10 140652262 140652287 -4937001 + AT_rich Low_complexity Low_complexity 1 25 0 244 232 88 40 chr10 140652306 140652431 -4936857 - L1ME4a LINE L1 -9 6112 5982 654 271 137 26 chr10 140652564 140652951 -4936337 - L1ME4a LINE L1 -2027 5781 5352 316 238 16 0 chr10 140653553 140653616 -4935672 - L2 LINE L2 0 3313 3250 466 278 64 43 chr10 140653628 140653815 -4935473 + MIR SINE MIR 72 262 0 219 114 0 0 chr10 140656211 140656246 -4933042 + (T)n Simple_repeat Simple_repeat 1 35 0 1864 141 0 33 chr10 140656707 140657013 -4932275 - AluSx SINE Alu -16 296 1 3145 253 65 29 chr10 140657246 140659169 -4930119 - L1ME1 LINE L1 -23 6143 4164 628 144 10 10 chr10 140659172 140659276 -4930012 - MLT1A2 LTR MaLR -4 370 267 2655 213 26 32 chr10 140659276 140660029 -4929259 - L1ME1 LINE L1 -2373 3773 3024 1890 133 51 51 chr10 140660029 140660404 -4928884 + THE1C LTR MaLR 1 375 0 2655 213 26 32 chr10 140660404 140660450 -4928838 - L1ME1 LINE L1 -3122 3024 2979 2008 145 125 2 chr10 140661155 140661563 -4927725 - L1MB4 LINE L1 0 6180 5723 258 272 160 10 chr10 140662660 140662866 -4926422 + L1ME4a LINE L1 5804 6040 -81 387 0 0 0 chr10 140663138 140663181 -4926107 + (TTTTA)n Simple_repeat Simple_repeat 5 47 0 1478 185 0 24 chr10 140663183 140663470 -4925818 - AluJo SINE Alu -32 280 1 426 339 27 57 chr10 140664334 140664632 -4924656 - L2 LINE L2 -13 3300 3012 221 369 0 0 chr10 140665394 140665459 -4923829 - MIR SINE MIR -184 78 14 386 324 89 48 chr10 140665465 140665836 -4923452 - L2 LINE L2 -469 2845 2460 3822 121 48 93 chr10 140666041 140666144 -4923144 - Tigger3(Golem) DNA MER2_type -1 3027 2921 2166 106 3 0 chr10 140666144 140666445 -4922843 - AluSx SINE Alu -10 302 1 1106 110 0 0 chr10 140666447 140666602 -4922686 - L1PA11 LINE L1 -9 6165 6011 3822 121 48 93 chr10 140666602 140667025 -4922263 - Tigger3(Golem) DNA MER2_type -108 2920 2542 2120 112 0 16 chr10 140667025 140667330 -4921958 + AluSx SINE Alu 1 300 -12 3822 121 48 93 chr10 140667330 140667576 -4921712 - Tigger3(Golem) DNA MER2_type -486 2542 2286 725 269 25 0 chr10 140667565 140667725 -4921563 - Tigger3(Golem) DNA MER2_type -2864 165 2 * 303 217 22 43 chr10 140667734 140667822 -4921466 + (TA)n Simple_repeat Simple_repeat 2 87 -49 1804 166 34 43 chr10 140667822 140667901 -4921387 + MER7A DNA MER2_type 2 80 -2958 2035 114 0 0 chr10 140667901 140668214 -4921074 - AluSx SINE Alu 0 313 1 1804 166 34 43 chr10 140668214 140668482 -4920806 + MER7A DNA MER2_type 80 345 -1 303 217 22 43 chr10 140668482 140668531 -4920757 + (TA)n Simple_repeat Simple_repeat 87 136 0 2028 99 38 3 chr10 140669261 140669553 -4919735 - AluSx SINE Alu -8 304 3 290 301 16 24 chr10 140669820 140669943 -4919345 + L2 LINE L2 2950 3071 -201 395 352 62 5 chr10 140670307 140670517 -4918771 + MIR SINE MIR 7 228 -34 2365 41 7 0 chr10 140670787 140671082 -4918206 - AluY SINE Alu -14 297 1 2804 105 38 25 chr10 140671706 140671866 -4917422 - L1PA16 LINE L1 -2 6164 6008 1975 111 0 4 chr10 140671866 140672145 -4917143 - AluSx SINE Alu -2 310 33 2804 105 38 25 chr10 140672145 140672430 -4916858 - L1PA16 LINE L1 -158 6008 5713 695 231 37 2 chr10 140672432 140672719 -4916569 + MER58B DNA MER1_type 1 341 0 296 256 0 11 chr10 140673089 140673179 -4916109 + MIR SINE MIR 163 251 -11 1842 146 21 0 chr10 140673202 140673515 -4915773 + AluSx SINE Alu 3 321 0 557 198 43 0 chr10 140673700 140673816 -4915472 + MER20 DNA MER1_type 95 215 -4 1433 231 82 70 chr10 140674207 140674607 -4914681 - L1MC4 LINE L1 -1 8041 7632 2184 115 0 0 chr10 140674607 140674903 -4914385 - AluSg SINE Alu -12 298 3 1433 231 82 70 chr10 140674903 140675001 -4914287 - L1MC4 LINE L1 -410 7632 7537 633 180 0 0 chr10 140675011 140675111 -4914177 - AluSg/x SINE Alu -39 271 172 379 281 0 0 chr10 140675143 140675232 -4914056 - L1MC4 LINE L1 -1340 6702 6614 324 279 0 23 chr10 140675244 140675330 -4913958 - L1MC4 LINE L1 -1345 6697 6614 281 229 13 6 chr10 140675331 140675410 -4913878 - AluSp SINE Alu -134 169 111 4639 223 66 20 chr10 140675410 140676045 -4913243 - L1MC4a LINE L1 -532 7276 6672 423 68 0 0 chr10 140676045 140676104 -4913184 + (TG)n Simple_repeat Simple_repeat 2 60 0 4639 223 66 20 chr10 140676104 140676737 -4912551 - L1MC4a LINE L1 -1136 6672 5949 2136 130 146 8 chr10 140677468 140677844 -4911444 + MSTA LTR MaLR 1 428 0 9669 141 10 39 chr10 140677846 140678753 -4910535 + MSTA-int LTR MaLR 3 842 -738 2237 144 8 37 chr10 140678753 140679128 -4910160 - THE1B LTR MaLR 0 364 1 9669 141 10 39 chr10 140679128 140679846 -4909442 + MSTA-int LTR MaLR 842 1580 0 2209 124 107 45 chr10 140679846 140680249 -4909039 + MSTA LTR MaLR 1 428 0 237 214 0 29 chr10 140680408 140680478 -4908810 + A-rich Low_complexity Low_complexity 4 71 0 489 326 64 17 chr10 140680660 140681132 -4908156 - L1ME4a LINE L1 -243 5878 5385 22 0 0 0 chr10 140681191 140681213 -4908075 + AT_rich Low_complexity Low_complexity 1 22 0 2108 114 7 0 chr10 140681213 140681511 -4907777 - AluSc SINE Alu -9 300 1 1530 182 3 17 chr10 140681522 140681813 -4907475 - AluJo SINE Alu -25 287 1 1888 156 0 0 chr10 140682179 140682474 -4906814 + AluJb SINE Alu 1 295 -17 237 156 313 0 chr10 140683913 140683977 -4905311 - L2 LINE L2 -4 3309 3226 771 231 23 0 chr10 140683984 140684157 -4905131 + L1PB4 LINE L1 5972 6148 -8 425 263 52 96 chr10 140684406 140684588 -4904700 - L1ME4a LINE L1 -12 6109 5939 297 0 0 0 chr10 140684588 140684621 -4904667 + (CA)n Simple_repeat Simple_repeat 1 33 0 425 263 52 96 chr10 140684621 140684689 -4904599 - L1ME4a LINE L1 -182 5939 5870 213 184 0 0 chr10 140684914 140684952 -4904336 - MIR SINE MIR -2 260 223 3064 178 158 95 chr10 140684968 140685371 -4903917 + L1MC3 LINE L1 6673 7049 -736 231 303 0 0 chr10 140685371 140685447 -4903841 + MLT1F1 LTR MaLR 35 110 -457 3064 178 158 95 chr10 140685447 140685995 -4903293 + L1MC3 LINE L1 7049 7769 -16 2318 49 21 0 chr10 140685995 140686282 -4903006 - AluY SINE Alu -18 293 1 3064 178 158 95 chr10 140686282 140686301 -4902987 + L1MC3 LINE L1 7769 7785 0 198 316 133 6 chr10 140686301 140686459 -4902829 - MIR SINE MIR -52 210 33 206 39 0 77 chr10 140686897 140686949 -4902339 + (CGGGA)n Simple_repeat Simple_repeat 2 49 0 21 57 0 0 chr10 140687311 140687346 -4901942 + GC_rich Low_complexity Low_complexity 1 35 0 1646 185 75 64 chr10 140688973 140689428 -4899860 + MLT1C LTR MaLR 1 460 -7 252 326 70 39 chr10 140692656 140692785 -4896503 + MIR3 SINE MIR 6 138 -70 4481 152 34 30 chr10 140694963 140695791 -4893497 + Tigger3b DNA MER2_type 1 831 -400 431 176 0 10 chr10 140695952 140696054 -4893234 + (CTCA)n Simple_repeat Simple_repeat 4 104 0 1964 176 0 56 chr10 140696063 140696093 -4893195 + Tigger3b DNA MER2_type 853 883 -2145 1215 94 0 0 chr10 140696093 140696273 -4893015 + (CTCA)n Simple_repeat Simple_repeat 1 180 0 1964 176 0 56 chr10 140696273 140696302 -4892986 + Tigger3b DNA MER2_type 883 912 -2116 2169 110 3 3 chr10 140696302 140696611 -4892677 - AluSx SINE Alu -3 309 1 1964 176 0 56 chr10 140696611 140696942 -4892346 + Tigger3b DNA MER2_type 912 1222 -9 793 199 102 5 chr10 140697137 140697323 -4891965 - MER58A DNA MER1_type -15 209 6 247 229 0 0 chr10 140697476 140697524 -4891764 - L1ME LINE L1 -551 5570 5523 421 149 0 0 chr10 140699709 140699776 -4889512 + L1M4 LINE L1 5402 5468 -706 229 65 0 43 chr10 140700207 140700253 -4889035 + (TTTTA)n Simple_repeat Simple_repeat 2 45 0 38530 87 8 7 chr10 140700253 140706371 -4882917 - L1PA6 LINE L1 -22 6132 8 3222 214 72 26 chr10 140706488 140707882 -4881406 - L1ME LINE L1 -706 5468 3929 191 286 125 27 chr10 140708218 140708330 -4880958 + L2 LINE L2 3167 3289 -24 543 229 159 5 chr10 140708420 140708621 -4880667 - L1M4 LINE L1 -1757 4389 4158 1615 142 0 19 chr10 140708628 140708896 -4880392 - AluJb SINE Alu -49 263 1 253 259 149 19 chr10 140709066 140709191 -4880097 - MIR SINE MIR -55 153 39 393 256 86 46 chr10 140710174 140710522 -4878766 - MLT1H LTR MaLR 0 549 186 782 258 16 51 chr10 140712497 140712753 -4876535 - MIR SINE MIR -3 259 13 246 161 35 58 chr10 140713565 140713652 -4875636 + T-rich Low_complexity Low_complexity 4 88 0 887 252 27 65 chr10 140713671 140713781 -4875507 + L1ME1 LINE L1 5808 5921 -245 4571 184 80 15 chr10 140713781 140714207 -4875081 - Tigger6a DNA MER2_type -514 1083 686 2081 115 7 0 chr10 140714207 140714511 -4874777 - AluSx SINE Alu -6 306 1 4571 184 80 15 chr10 140714511 140715101 -4874187 - Tigger6a DNA MER2_type -911 686 1 887 252 27 65 chr10 140715101 140715359 -4873929 + L1ME1 LINE L1 5921 6162 -4 2183 86 14 0 chr10 140715433 140715725 -4873563 - AluSx SINE Alu -16 296 1 1891 107 3 21 chr10 140715914 140716204 -4873084 - AluSx SINE Alu -1 311 27 611 204 7 20 chr10 140716212 140716359 -4872929 - L1M4 LINE L1 -1048 5098 4954 315 0 0 0 chr10 140716360 140716395 -4872893 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1732 132 37 4 chr10 140716397 140716670 -4872618 - AluSx SINE Alu -30 282 1 664 263 26 104 chr10 140716675 140716801 -4872487 - L1M4 LINE L1 -2849 3297 3163 591 53 0 0 chr10 140716801 140716876 -4872412 + (TTCC)n Simple_repeat Simple_repeat 3 77 0 354 111 0 0 chr10 140716878 140716923 -4872365 - AluS SINE Alu -28 273 229 664 263 26 104 chr10 140716923 140717247 -4872041 - L1M4 LINE L1 -2984 3162 2839 268 108 20 88 chr10 140717458 140717560 -4871728 + (TCC)n Simple_repeat Simple_repeat 2 96 0 227 348 17 0 chr10 140718360 140718478 -4870810 - MIR SINE MIR -82 180 61 315 0 0 0 chr10 140719116 140719151 -4870137 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 223 328 59 0 chr10 140719611 140719730 -4869558 + MIR SINE MIR 59 184 -78 281 306 118 14 chr10 140721797 140721941 -4867347 - MIR3 SINE MIR -28 180 22 1786 207 46 7 chr10 140722638 140723048 -4866240 + MSTB LTR MaLR 1 426 0 299 209 0 11 chr10 140724361 140724452 -4864836 + (CA)n Simple_repeat Simple_repeat 1 90 0 7536 136 18 11 chr10 140724557 140725754 -4863534 - Tigger1 DNA MER2_type -1213 1205 1 1814 134 69 3 chr10 140726102 140726392 -4862896 + AluSx SINE Alu 1 309 -3 253 326 48 48 chr10 140726697 140727013 -4862275 + L1MC4a LINE L1 4519 4834 -1312 404 262 159 17 chr10 140727607 140727840 -4861448 + L1MC4a LINE L1 5615 5880 -1928 21 71 0 0 chr10 140729775 140729817 -4859471 + AT_rich Low_complexity Low_complexity 1 42 0 22 35 0 0 chr10 140730167 140730196 -4859092 + AT_rich Low_complexity Low_complexity 1 29 0 255 243 35 75 chr10 140730367 140730540 -4858748 - HAL1 LINE L1 -111 2396 2231 322 230 51 73 chr10 140730620 140730798 -4858490 - HAL1b LINE L1 -432 916 743 413 351 63 34 chr10 140730849 140731296 -4857992 + L1MEc LINE L1 174 633 -5930 1771 263 73 81 chr10 140731690 140733374 -4855914 + L1MEc LINE L1 782 2482 -3900 9062 111 11 4 chr10 140733374 140734649 -4854639 + HSMAR1 DNA Mariner 1 1284 -3 1771 263 73 81 chr10 140734649 140734947 -4854341 + L1MEc LINE L1 2482 2781 -3601 24 53 0 0 chr10 140737706 140737744 -4851544 + AT_rich Low_complexity Low_complexity 1 38 0 1914 168 0 19 chr10 140738009 140738319 -4850969 + AluJo SINE Alu 1 304 -8 2123 117 0 0 chr10 140738820 140739094 -4850194 + AluSq SINE Alu 1 274 -39 299 189 162 34 chr10 140739099 140739247 -4850041 - MER5C DNA MER1_type -83 241 75 505 183 0 0 chr10 140739972 140740065 -4849223 - L1MC1 LINE L1 0 6333 6241 271 320 47 0 chr10 140740900 140741028 -4848260 - MIR3 SINE MIR -61 147 14 239 269 21 0 chr10 140741450 140741543 -4847745 - L1ME4a LINE L1 -6 6115 6021 371 320 77 13 chr10 140741992 140742226 -4847062 + MIR SINE MIR 9 257 -5 21 0 0 0 chr10 140742635 140742656 -4846632 + AT_rich Low_complexity Low_complexity 1 21 0 507 17 0 0 chr10 140742993 140743053 -4846235 + (TC)n Simple_repeat Simple_repeat 1 60 0 5008 53 0 0 chr10 140746893 140747495 -4841793 + L1PA5 LINE L1 5550 6151 -3 1621 185 10 75 chr10 140748176 140748576 -4840712 - MLT1A2 LTR MaLR 0 374 1 225 326 20 10 chr10 140749714 140749812 -4839476 + MIR3 SINE MIR 106 204 -4 280 305 32 32 chr10 140750176 140750330 -4838958 + MER5A DNA MER1_type 13 166 -23 * 444 315 18 0 chr10 140750199 140750364 -4838924 - MER5A DNA MER1_type -21 168 1 23 33 0 0 chr10 140750558 140750588 -4838700 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr10 140750609 140750637 -4838651 + AT_rich Low_complexity Low_complexity 1 28 0 325 216 14 0 chr10 140751668 140751742 -4837546 + MIR SINE MIR 85 159 -103 304 208 104 56 chr10 140753566 140753710 -4835578 - L1ME4a LINE L1 -3 6118 5968 439 328 22 35 chr10 140753819 140754048 -4835240 - L1ME4a LINE L1 -318 5803 5578 354 45 0 0 chr10 140754134 140754178 -4835110 + (CCAA)n Simple_repeat Simple_repeat 1 44 0 266 276 47 87 chr10 140754210 140754337 -4834951 + L2 LINE L2 3187 3308 -5 217 200 0 0 chr10 140755063 140755103 -4834185 + MER5A DNA MER1_type 147 186 -3 267 296 146 38 chr10 140756720 140757007 -4832281 - MARNA DNA Mariner -255 331 14 343 275 90 14 chr10 140759808 140760219 -4829069 + MLT1L LTR MaLR 43 539 -76 2065 98 0 50 chr10 140761350 140761672 -4827616 + AluSx SINE Alu 1 307 0 1289 192 8 27 chr10 140761673 140761934 -4827354 - L1MD3 LINE L1 -10 7985 7730 227 287 52 29 chr10 140764399 140764535 -4824753 - MIR SINE MIR -95 167 29 1828 170 0 7 chr10 140765922 140766211 -4823077 + AluJb SINE Alu 1 287 -25 202 221 162 0 chr10 140766495 140766563 -4822725 - MIR SINE MIR -86 122 44 228 67 0 0 chr10 140769495 140769525 -4819763 + (TTTTC)n Simple_repeat Simple_repeat 2 31 0 210 223 191 43 chr10 140769903 140769997 -4819291 + MIR SINE MIR 16 123 -85 2568 66 0 0 chr10 140770490 140770792 -4818496 - AluY SINE Alu -9 302 1 251 222 0 0 chr10 140770896 140770941 -4818347 - MIR SINE MIR -55 153 109 318 161 0 46 chr10 140771117 140771204 -4818084 + CT-rich Low_complexity Low_complexity 2 84 0 192 152 0 0 chr10 140771454 140771487 -4817801 + GA-rich Low_complexity Low_complexity 1 33 0 238 268 12 0 chr10 140772476 140772558 -4816730 - MER112 DNA MER1_type -91 169 87 277 244 13 26 chr10 140772720 140772798 -4816490 + MIR SINE MIR 48 124 -138 2536 54 0 3 chr10 140773158 140773453 -4815835 - AluY SINE Alu -17 294 1 212 203 135 54 chr10 140773955 140774029 -4815259 + MIR SINE MIR 61 140 -68 192 323 15 15 chr10 140774555 140774620 -4814668 + MIR3 SINE MIR 144 208 0 308 260 41 73 chr10 140774656 140774779 -4814509 - L2 LINE L2 -19 3294 3176 2865 186 48 2 chr10 140775417 140775975 -4813313 + L1MB5 LINE L1 5583 6166 -8 215 222 0 0 chr10 140779883 140779919 -4809369 - L2 LINE L2 -16 3297 3262 21 0 0 0 chr10 140779968 140779989 -4809299 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 140780468 140780489 -4808799 + AT_rich Low_complexity Low_complexity 1 21 0 252 267 257 9 chr10 140781565 140781670 -4807618 - L2 LINE L2 -5 3267 3137 918 85 0 0 chr10 140782505 140782646 -4806642 + AluY SINE Alu 167 307 0 222 192 19 19 chr10 140782746 140782798 -4806490 - L2 LINE L2 -1 3312 3261 2656 131 47 7 chr10 140783740 140784167 -4805121 - L1PB4 LINE L1 0 6156 5713 206 310 163 25 chr10 140784224 140784427 -4804861 - L2 LINE L2 -93 3179 2949 418 261 4 8 chr10 140784795 140785046 -4804242 + (CA)n Simple_repeat Simple_repeat 1 249 0 6132 156 59 27 chr10 140785419 140786318 -4802970 - Tigger3b DNA MER2_type -1797 1231 283 2201 93 0 30 chr10 140786318 140786618 -4802670 + AluSx SINE Alu 1 291 -21 6132 156 59 27 chr10 140786618 140786907 -4802381 - Tigger3b DNA MER2_type -2745 283 5 22 106 0 0 chr10 140790314 140790380 -4798908 + GC_rich Low_complexity Low_complexity 1 66 0 21 89 0 0 chr10 140790444 140790500 -4798788 + GC_rich Low_complexity Low_complexity 1 56 0 23 0 0 0 chr10 140790514 140790537 -4798751 + GC_rich Low_complexity Low_complexity 1 23 0 302 286 50 34 chr10 140791636 140791755 -4797533 - MIR SINE MIR -56 152 32 1610 210 27 0 chr10 140792846 140793175 -4796113 - MER58B DNA MER1_type 0 341 4 2174 229 57 25 chr10 140793297 140793948 -4795340 - MLT1E2 LTR MaLR -2 624 4 306 341 78 16 chr10 140794335 140794456 -4794832 - L2 LINE L2 0 3272 3141 1798 212 78 11 chr10 140794456 140794894 -4794394 - MLT1C LTR MaLR 0 467 1 1882 178 49 9 chr10 140795920 140796269 -4793019 - MLT1A1 LTR MaLR -2 363 1 269 352 31 8 chr10 140796826 140796954 -4792334 - MIR SINE MIR -72 190 60 247 231 33 116 chr10 140797606 140797727 -4791561 - MIR SINE MIR -51 211 101 258 303 22 11 chr10 140797785 140797874 -4791414 + (TG)n Simple_repeat Simple_repeat 1 90 0 274 127 7 218 chr10 140798372 140798514 -4790774 - MER3 DNA MER1_type -8 201 90 181 237 0 0 chr10 140798821 140798859 -4790429 - MIR SINE MIR -26 236 199 219 36 0 0 chr10 140799601 140799629 -4789659 + (A)n Simple_repeat Simple_repeat 1 28 0 228 243 57 6 chr10 140800371 140800455 -4788833 + MIR SINE MIR 58 147 -61 285 258 45 58 chr10 140801629 140801784 -4787504 + MIR3 SINE MIR 52 204 -4 192 269 96 58 chr10 140803049 140803153 -4786135 + L2 LINE L2 2992 3099 -173 211 276 17 0 chr10 140803257 140803315 -4785973 - MER5A DNA MER1_type -77 112 54 386 265 61 15 chr10 140804180 140804312 -4784976 + MIR3 SINE MIR 66 203 -5 378 256 58 83 chr10 140804670 140804826 -4784462 + MIR SINE MIR 111 262 0 2283 127 51 25 chr10 140804991 140805346 -4783942 - THE1B LTR MaLR 0 364 1 267 0 0 0 chr10 140805353 140805383 -4783905 - THE1C LTR MaLR -345 30 1 1267 203 33 4 chr10 140806006 140806277 -4783011 - L1MB7 LINE L1 -12 6172 5894 1294 263 81 19 chr10 140806680 140807099 -4782189 + MLT1E LTR MaLR 87 531 -62 656 312 73 42 chr10 140807202 140807698 -4781590 + L2 LINE L2 2768 3266 -6 379 310 76 20 chr10 140808073 140808270 -4781018 + L2 LINE L2 3060 3267 -46 2006 143 48 0 chr10 140808580 140808873 -4780415 - AluSx SINE Alu -5 307 1 645 152 170 36 chr10 140812136 140812301 -4776987 + MER3 DNA MER1_type 1 187 -22 320 291 47 65 chr10 140812307 140812506 -4776782 - L2 LINE L2 -424 2890 2696 2264 104 13 0 chr10 140812506 140812815 -4776473 + AluSq SINE Alu 1 313 0 320 291 47 65 chr10 140812815 140812893 -4776395 - L2 LINE L2 -618 2696 2618 1660 203 16 0 chr10 140813673 140813978 -4775310 - AluSx SINE Alu -2 310 1 23 33 0 0 chr10 140813981 140814011 -4775277 + AT_rich Low_complexity Low_complexity 1 30 0 362 216 135 61 chr10 140814312 140814460 -4774828 + L1ME4a LINE L1 5961 6119 -2 255 301 64 26 chr10 140815272 140815428 -4773860 - MARNA DNA Mariner -88 498 337 207 0 0 0 chr10 140818539 140818562 -4770726 + (TC)n Simple_repeat Simple_repeat 2 24 0 225 220 0 34 chr10 140818917 140818976 -4770312 + (TCTCTG)n Simple_repeat Simple_repeat 6 62 0 315 0 0 0 chr10 140820138 140820173 -4769115 + (TG)n Simple_repeat Simple_repeat 1 35 0 24 0 0 0 chr10 140821075 140821099 -4768189 + AT_rich Low_complexity Low_complexity 1 24 0 267 330 62 31 chr10 140821774 140821968 -4767320 + MLT1K LTR MaLR 136 335 -253 403 247 0 10 chr10 140822081 140822178 -4767110 + MLT1K LTR MaLR 484 579 -9 180 77 0 0 chr10 140822636 140822662 -4766626 + (T)n Simple_repeat Simple_repeat 1 26 0 2847 22 0 0 chr10 140823123 140823434 -4765854 - AluYb8 SINE Alu -7 311 1 986 217 155 0 chr10 140823800 140824058 -4765230 - L1MD2 LINE L1 -17 6342 6045 2225 110 3 25 chr10 140824106 140824423 -4764865 - AluSx SINE Alu -2 310 1 205 259 109 109 chr10 140825431 140825678 -4763610 - L2 LINE L2 -212 3060 2814 193 325 239 8 chr10 140825889 140826006 -4763282 + MIR3 SINE MIR 61 204 -4 25 31 0 0 chr10 140828341 140828373 -4760915 + AT_rich Low_complexity Low_complexity 1 32 0 279 253 74 68 chr10 140831482 140831644 -4757644 + L1ME4a LINE L1 1261 1423 -4949 256 311 17 76 chr10 140832105 140832224 -4757064 + L2 LINE L2 3151 3262 -10 251 261 14 14 chr10 140832245 140832314 -4756974 + HAL1b LINE L1 549 617 -731 325 328 86 50 chr10 140832626 140832928 -4756360 + L1ME4a LINE L1 2184 2496 -3888 755 289 79 29 chr10 140834482 140834938 -4754350 + L1ME4a LINE L1 3965 4443 -1939 14839 133 22 24 chr10 140835367 140837271 -4752017 + Tigger1 DNA MER2_type 26 1932 -486 216 0 0 0 chr10 140837271 140837295 -4751993 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1975 121 4 14 chr10 140837296 140837576 -4751712 - AluSc SINE Alu -32 277 1 14839 133 22 24 chr10 140837576 140838066 -4751222 + Tigger1 DNA MER2_type 1931 2418 0 2152 105 3 30 chr10 140838259 140838563 -4750725 + AluSq SINE Alu 5 300 -13 1377 284 116 21 chr10 140838888 140839610 -4749678 + L1ME4a LINE L1 5554 6344 -13 915 162 56 0 chr10 140840163 140840342 -4748946 + MER53 DNA DNA 1 189 0 356 102 0 17 chr10 140844591 140844650 -4744638 + (TTTTC)n Simple_repeat Simple_repeat 5 62 0 2072 148 0 0 chr10 140844664 140844968 -4744320 - AluSx SINE Alu -8 304 1 732 222 6 35 chr10 140845764 140845935 -4743353 + L1MB8 LINE L1 6010 6175 -3 652 260 109 53 chr10 140846055 140846373 -4742915 + MLT1G1 LTR MaLR 25 402 -193 1266 202 28 7 chr10 140846373 140846655 -4742633 - L1M4 LINE L1 -942 5440 5153 4338 224 55 17 chr10 140846756 140848329 -4740959 - L1M4 LINE L1 -2683 3699 2064 5257 160 4 11 chr10 140848445 140849350 -4739938 + L1MA5 LINE L1 5400 6298 -2 202 246 0 43 chr10 140849475 140849544 -4739744 + CT-rich Low_complexity Low_complexity 5 70 0 1013 184 0 0 chr10 140849637 140849800 -4739488 - AluJb SINE Alu -17 295 133 500 219 55 30 chr10 140849807 140849853 -4739435 - L1M4 LINE L1 -746 5400 5357 2229 118 0 0 chr10 140849853 140850140 -4739148 - AluSg SINE Alu -23 287 1 500 219 55 30 chr10 140850140 140850845 -4738443 - L1M4 LINE L1 -789 5357 4496 1916 232 56 0 chr10 140850846 140851328 -4737960 + L1M4 LINE L1 3972 4480 -1666 1332 223 143 37 chr10 140851325 140851872 -4737416 - L1M4 LINE L1 -981 5234 4630 * 4700 251 81 26 chr10 140851883 140854935 -4734353 - L1MEc LINE L1 -2475 3740 546 814 181 13 32 chr10 140854955 140855110 -4734178 - FRAM SINE Alu -25 151 1 693 309 79 10 chr10 140855112 140855403 -4733885 - L1MEc LINE L1 -6066 330 20 366 329 76 44 chr10 140855405 140855812 -4733476 - L1M4 LINE L1 -1778 4437 4018 2018 132 13 7 chr10 140855931 140856241 -4733047 + AluSq SINE Alu 1 312 -1 564 328 45 15 chr10 140857808 140858106 -4731182 + L2 LINE L2 2770 3082 -231 363 43 0 0 chr10 140858173 140858219 -4731069 - MADE1 DNA Mariner -34 46 1 328 353 22 7 chr10 140858221 140858360 -4730928 + L2 LINE L2 3172 3312 -1 255 173 0 0 chr10 140858404 140858456 -4730832 + (TAA)n Simple_repeat Simple_repeat 1 52 0 214 321 117 12 chr10 140858877 140859039 -4730249 - L2 LINE L2 -952 2362 2184 190 320 10 50 chr10 140859361 140859461 -4729827 + L2 LINE L2 3197 3292 -21 6471 113 22 2 chr10 140859815 140860772 -4728516 - L1PA10 LINE L1 -1364 4782 3807 6666 86 23 19 chr10 140860772 140861462 -4727826 + L1PA10 LINE L1 4789 5492 -676 2439 83 0 10 chr10 140861462 140861776 -4727512 + AluY SINE Alu 1 311 0 6666 86 23 19 chr10 140861776 140862445 -4726843 + L1PA10 LINE L1 5492 6156 -12 307 297 44 0 chr10 140862793 140862884 -4726404 + L1ME4a LINE L1 5964 6058 -63 276 198 135 95 chr10 140863052 140863178 -4726110 + MER103 DNA DNA 20 150 -16 257 278 113 23 chr10 140863513 140863646 -4725642 - LTR16A LTR ERVL -13 437 293 210 302 113 93 chr10 140865745 140866056 -4723232 - L2 LINE L2 0 3272 2956 975 229 136 72 chr10 140866546 140866979 -4722309 + MLT1C LTR MaLR 7 467 0 187 276 0 69 chr10 140866989 140867047 -4722241 - L2 LINE L2 -1039 2275 2222 278 182 18 0 chr10 140867290 140867345 -4721943 - MER5A DNA MER1_type -93 96 41 1940 129 0 16 chr10 140871494 140871846 -4717442 - AluY SINE Alu 0 311 1 215 221 132 0 chr10 140873494 140873562 -4715726 - L2 LINE L2 -534 2780 2704 239 213 0 0 chr10 140873562 140873623 -4715665 - MER53 DNA DNA -7 182 122 2259 88 3 0 chr10 140873623 140873958 -4715330 + AluSp SINE Alu 16 351 0 2383 199 19 53 chr10 140874011 140874293 -4714995 - L1MB8 LINE L1 0 6178 5925 2280 133 126 5 chr10 140874293 140874675 -4714613 - MSTA LTR MaLR 0 428 1 2383 199 19 53 chr10 140874675 140874971 -4714317 - L1MB8 LINE L1 -253 5925 5620 383 149 9 149 chr10 140874973 140875051 -4714237 - MER53 DNA DNA -89 100 41 1513 146 0 98 chr10 140875051 140875379 -4713909 - AluY SINE Alu -15 296 1 383 149 9 149 chr10 140875379 140875414 -4713874 - MER53 DNA DNA -148 41 3 305 315 143 33 chr10 140875457 140875885 -4713403 - L2 LINE L2 -662 2652 2178 181 344 0 33 chr10 140875925 140875986 -4713302 - L2 LINE L2 -24 3248 3190 273 274 36 24 chr10 140876960 140877044 -4712244 + L2 LINE L2 3225 3309 -4 240 35 0 0 chr10 140878090 140878119 -4711169 + (TTA)n Simple_repeat Simple_repeat 1 29 0 2678 89 8 29 chr10 140879640 140880021 -4709267 - THE1C LTR MaLR 0 375 3 1902 104 29 4 chr10 140882268 140882547 -4706741 + AluSc SINE Alu 1 286 -23 204 122 41 20 chr10 140882564 140882613 -4706675 + A-rich Low_complexity Low_complexity 2 51 0 522 57 0 0 chr10 140882984 140883054 -4706234 + (GA)n Simple_repeat Simple_repeat 1 70 0 341 251 149 57 chr10 140883566 140883741 -4705547 + L1ME LINE L1 5279 5469 -2339 240 35 0 0 chr10 140883741 140883770 -4705518 + (TG)n Simple_repeat Simple_repeat 1 29 0 360 294 34 20 chr10 140883778 140883924 -4705364 + L1ME LINE L1 5510 5657 -464 312 288 137 7 chr10 140884572 140884711 -4704577 + MIR SINE MIR 45 201 -61 1786 170 24 15 chr10 140884749 140885085 -4704203 + MER2 DNA MER2_type 4 342 -2 387 98 0 0 chr10 140885091 140885152 -4704136 + (TG)n Simple_repeat Simple_repeat 2 62 0 307 241 51 51 chr10 140885615 140885752 -4703536 + L2 LINE L2 2820 2956 -316 508 268 16 0 chr10 140887499 140887626 -4701662 - MER45A DNA AcHobo -49 129 1 2490 44 0 16 chr10 140888872 140889188 -4700100 - AluY SINE Alu 0 311 1 3230 179 47 0 chr10 140889216 140889797 -4699491 + L1MB3 LINE L1 5431 6038 -145 253 211 14 0 chr10 140889797 140889868 -4699420 + L1MB3 LINE L1 5967 6038 -145 992 188 19 9 chr10 140889868 140890081 -4699207 + L1MB3 LINE L1 5967 6181 -2 2014 130 13 0 chr10 140891926 140892234 -4697054 - AluSx SINE Alu 0 312 1 244 299 161 34 chr10 140892493 140892817 -4696471 - L2 LINE L2 -15 3298 2934 2319 216 92 33 chr10 140893848 140894487 -4694801 - L1ME3 LINE L1 -1 6161 5485 327 146 39 97 chr10 140894799 140894838 -4694450 - LTR33 LTR ERVL -2 519 479 2226 140 92 5 chr10 140894838 140895231 -4694057 - MSTA LTR MaLR -1 427 1 327 146 39 97 chr10 140895231 140895294 -4693994 - LTR33 LTR ERVL -42 479 423 458 264 112 30 chr10 140895701 140895898 -4693390 + MLT1K LTR MaLR 376 588 0 2008 88 0 4 chr10 140896149 140896422 -4692866 + AluY SINE Alu 39 310 -1 207 100 0 0 chr10 140897548 140897578 -4691710 + (TAA)n Simple_repeat Simple_repeat 2 31 0 381 282 99 33 chr10 140898219 140898400 -4690888 + L1ME4a LINE L1 5474 5666 -455 243 252 113 0 chr10 140898548 140898663 -4690625 + L1ME4a LINE L1 5793 5920 -201 1945 128 0 30 chr10 140898719 140899017 -4690271 - AluSg SINE Alu -21 289 1 230 184 20 0 chr10 140899025 140899074 -4690214 + L1ME4a LINE L1 6051 6100 -21 351 247 217 16 chr10 140899501 140899642 -4689646 + MER5A DNA MER1_type 12 171 -7 757 254 132 25 chr10 140902275 140902602 -4686686 - MLT1I LTR MaLR -7 402 41 313 280 30 10 chr10 140903344 140903444 -4685844 - MLT1J2 LTR MaLR -298 152 51 812 268 150 32 chr10 140904789 140905255 -4684033 - LTR33 LTR ERVL 0 521 1 236 343 123 0 chr10 140905367 140905513 -4683775 + MIR SINE MIR 19 182 -80 1727 244 105 29 chr10 140905889 140906434 -4682854 - MLT1E LTR MaLR 0 593 8 234 0 0 0 chr10 140906501 140906527 -4682761 + (TG)n Simple_repeat Simple_repeat 2 27 0 2680 10 0 3 chr10 140906537 140906844 -4682444 - AluY SINE Alu -5 306 1 25 0 0 0 chr10 140907700 140907725 -4681563 + AT_rich Low_complexity Low_complexity 1 25 0 504 250 178 11 chr10 140908809 140909073 -4680215 + LTR16A LTR ERVL 23 330 -120 308 322 29 80 chr10 140909450 140909689 -4679599 - L1ME LINE L1 -4147 2114 1888 229 272 94 52 chr10 140909879 140910092 -4679196 - L1ME LINE L1 -4929 1151 930 384 259 37 131 chr10 140910094 140910509 -4678779 - L1ME LINE L1 -5058 1022 683 5768 159 7 26 chr10 140911133 140912471 -4676817 - L1MA4 LINE L1 -7 6293 4978 26 30 0 0 chr10 140912550 140912583 -4676705 + AT_rich Low_complexity Low_complexity 1 33 0 232 227 0 0 chr10 140912619 140912663 -4676625 - HAL1b LINE L1 -904 444 401 2848 95 0 24 chr10 140913330 140913750 -4675538 - L1PA13 LINE L1 0 6163 5754 185 0 40 0 chr10 140914346 140914371 -4674917 + (TTA)n Simple_repeat Simple_repeat 3 28 0 286 306 116 27 chr10 140914831 140914978 -4674310 + MIR3 SINE MIR 1 160 -48 2036 119 18 37 chr10 140916018 140916462 -4672826 + MER51B LTR ERV1 1 377 0 291 283 61 10 chr10 140916488 140916587 -4672701 + MIR3 SINE MIR 66 169 -39 1364 243 54 9 chr10 140917937 140918270 -4671018 - MER89 LTR ERV1 -14 545 198 400 151 14 0 chr10 140918256 140918329 -4670959 - MER89 LTR ERV1 -482 77 4 * 1297 179 104 80 chr10 140918426 140918878 -4670410 - MLT1C LTR MaLR -1 466 4 7469 121 40 11 chr10 140919699 140920886 -4668402 + Tigger3b DNA MER2_type 1 1221 -10 186 43 0 0 chr10 140920937 140920960 -4668328 + (CA)n Simple_repeat Simple_repeat 1 23 0 1671 180 53 28 chr10 140923731 140924092 -4665196 - THE1C LTR MaLR -5 370 1 23 0 0 0 chr10 140925160 140925183 -4664105 + AT_rich Low_complexity Low_complexity 1 23 0 348 308 39 19 chr10 140926357 140926461 -4662827 + L2 LINE L2 3201 3306 -7 186 133 0 0 chr10 140927084 140927114 -4662174 + (TAAAAA)n Simple_repeat Simple_repeat 2 31 0 620 293 22 6 chr10 140927122 140927303 -4661985 - MIR SINE MIR -32 230 47 2080 128 0 3 chr10 140927415 140927750 -4661538 + AluSx SINE Alu 1 334 0 21 82 0 0 chr10 140927816 140927865 -4661423 + AT_rich Low_complexity Low_complexity 1 49 0 273 282 92 18 chr10 140929100 140929263 -4660025 + HAL1 LINE L1 1399 1573 -934 1886 159 51 59 chr10 140929273 140929662 -4659626 - MLT1B LTR MaLR -4 386 1 586 295 238 9 chr10 140929978 140930184 -4659104 + L2 LINE L2 2456 2613 -700 2295 114 0 13 chr10 140930184 140930500 -4658788 + AluSp SINE Alu 1 312 -1 586 295 238 9 chr10 140930500 140930993 -4658295 + L2 LINE L2 2613 3312 -1 38 51 0 0 chr10 140931489 140931548 -4657740 + AT_rich Low_complexity Low_complexity 1 59 0 189 0 0 0 chr10 140932139 140932160 -4657128 + (TAA)n Simple_repeat Simple_repeat 2 22 0 365 289 67 41 chr10 140932664 140932858 -4656430 + L1M4 LINE L1 4154 4352 -1794 24 0 0 0 chr10 140933073 140933097 -4656191 + AT_rich Low_complexity Low_complexity 1 24 0 242 324 42 14 chr10 140935366 140935508 -4653780 + Charlie8 DNA MER1_type 47 192 -2225 4133 29 23 10 chr10 140936240 140936754 -4652534 + L1PA4 LINE L1 5635 6155 0 296 315 87 65 chr10 140936881 140937157 -4652131 - L2 LINE L2 -4 3268 2987 689 287 137 33 chr10 140937488 140937976 -4651312 + L2 LINE L2 1133 1671 -1643 568 287 90 8 chr10 140938681 140938925 -4650363 + MLT1C LTR MaLR 204 467 0 791 223 27 5 chr10 140940860 140941048 -4648240 - MER20 DNA MER1_type 0 219 28 283 314 88 46 chr10 140941638 140941899 -4647389 - L2 LINE L2 -56 3257 2986 509 153 34 23 chr10 140941910 140942086 -4647202 + (TG)n Simple_repeat Simple_repeat 1 178 0 243 206 14 55 chr10 140942101 140942174 -4647114 + (TG)n Simple_repeat Simple_repeat 2 71 0 326 216 33 13 chr10 140942188 140942341 -4646947 + (TG)n Simple_repeat Simple_repeat 1 156 0 782 271 154 63 chr10 140942678 140943361 -4645927 - L1MC4 LINE L1 0 8042 7298 7253 172 5 25 chr10 140943373 140946002 -4643286 + L1P3 LINE L1 2 2636 -3825 484 95 24 0 chr10 140946092 140946176 -4643112 + (TAGA)n Simple_repeat Simple_repeat 4 89 0 289 306 66 27 chr10 140946344 140946602 -4642686 + L1MEc LINE L1 802 1069 -5494 284 260 160 45 chr10 140946629 140946898 -4642390 + L1MEc LINE L1 1143 1442 -5121 302 361 94 41 chr10 140946903 140947147 -4642141 + L1MEc LINE L1 1329 1585 -4799 1655 169 10 33 chr10 140947310 140947617 -4641671 - AluJo SINE Alu -12 300 1 2567 63 0 0 chr10 140947624 140947924 -4641364 - AluY SINE Alu -11 300 1 316 248 51 117 chr10 140948501 140948910 -4640378 + L1ME LINE L1 5255 5640 -530 405 383 9 26 chr10 140949996 140950223 -4639065 + MIR SINE MIR 28 250 -12 337 339 40 16 chr10 140950544 140950668 -4638620 - L2 LINE L2 0 3272 3146 1234 160 60 85 chr10 140950672 140950990 -4638298 - MLT1B LTR MaLR -7 383 74 317 233 83 50 chr10 140950990 140951110 -4638178 - L1MC4 LINE L1 -1339 6983 1941 1939 166 0 3 chr10 140952141 140952436 -4636852 - AluSx SINE Alu -18 294 1 264 348 68 63 chr10 140952682 140952903 -4636385 + MIR SINE MIR 28 249 -13 27 29 0 0 chr10 140953851 140953885 -4635403 + AT_rich Low_complexity Low_complexity 1 34 0 1458 113 52 0 chr10 140954440 140954653 -4634635 + MER30 DNA MER1_type 5 228 -2 182 252 153 90 chr10 140957042 140957106 -4632182 + MIR SINE MIR 23 98 -164 1026 264 63 63 chr10 140957106 140957617 -4631671 + MLT1J LTR MaLR 1 511 0 182 252 153 90 chr10 140957617 140957663 -4631625 + MIR SINE MIR 98 140 -122 216 301 172 11 chr10 140958162 140958255 -4631033 - MIR SINE MIR -81 127 20 289 315 79 8 chr10 140958968 140959095 -4630193 - L2 LINE L2 -158 3114 2979 639 207 3 0 chr10 140963887 140964242 -4625046 + (CA)n Simple_repeat Simple_repeat 1 356 0 186 216 0 0 chr10 140964258 140964332 -4624956 + (CA)n Simple_repeat Simple_repeat 2 75 0 344 332 20 47 chr10 140964945 140965136 -4624152 + MIR SINE MIR 11 197 -65 202 286 0 0 chr10 140965819 140965868 -4623420 + (TG)n Simple_repeat Simple_repeat 1 49 0 239 395 43 19 chr10 140967424 140967586 -4621702 - MIR SINE MIR -96 166 1 33 25 0 0 chr10 140968984 140969024 -4620264 + AT_rich Low_complexity Low_complexity 1 40 0 890 186 34 0 chr10 140970000 140970177 -4619111 - MER3 DNA MER1_type -26 183 1 296 343 64 23 chr10 140971139 140971311 -4617977 - MIR SINE MIR -5 257 79 184 214 0 157 chr10 140971659 140971729 -4617559 - MIR SINE MIR -109 99 41 369 0 0 0 chr10 140971971 140972012 -4617276 + (TG)n Simple_repeat Simple_repeat 1 41 0 346 354 85 15 chr10 140972344 140972604 -4616684 + L2 LINE L2 3036 3313 0 357 335 104 0 chr10 140974413 140974586 -4614702 - MIR SINE MIR -12 250 60 357 290 54 9 chr10 140975841 140975972 -4613316 + MIR SINE MIR 12 149 -67 1056 242 114 29 chr10 140976714 140977057 -4612231 + MLT1D LTR MaLR 70 441 -64 2384 157 43 12 chr10 140977286 140977701 -4611587 - MSTA LTR MaLR 0 428 1 2728 124 44 5 chr10 140978393 140978805 -4610483 - MSTA LTR MaLR 0 428 1 186 352 78 55 chr10 140978902 140979030 -4610258 + MIR SINE MIR 16 146 -62 1780 155 15 103 chr10 140980053 140980460 -4608828 - MLT1A2 LTR MaLR 0 374 4 211 269 19 0 chr10 140980917 140980969 -4608319 - MIR SINE MIR -62 146 94 1270 247 21 29 chr10 140982629 140983010 -4606278 - MLT1C LTR MaLR -18 449 72 182 182 30 0 chr10 140983990 140984023 -4605265 + MIR SINE MIR 113 146 -116 517 292 14 0 chr10 140984880 140985024 -4604264 - L2 LINE L2 0 3313 3168 359 277 136 57 chr10 140986265 140986442 -4602846 + MIR SINE MIR 23 213 -49 2540 81 0 0 chr10 140987115 140987424 -4601864 + AluY SINE Alu 1 309 -2 268 291 0 38 chr10 140988090 140988169 -4601119 + MIR SINE MIR 78 153 -109 633 246 5 85 chr10 140989039 140989250 -4600038 + L2 LINE L2 3119 3312 -1 1636 165 41 76 chr10 140989302 140989695 -4599593 + MLT1B LTR MaLR 10 388 -2 340 250 11 11 chr10 140991394 140991482 -4597806 - MIR SINE MIR -172 90 3 200 326 20 0 chr10 140993369 140993467 -4595821 + (TG)n Simple_repeat Simple_repeat 1 100 0 522 247 0 0 chr10 140994913 140995091 -4594197 + (CA)n Simple_repeat Simple_repeat 1 178 0 734 134 0 0 chr10 140995437 140995549 -4593739 + AluY SINE Alu 196 307 -4 1224 233 96 16 chr10 140995555 140995929 -4593359 - MLT1C LTR MaLR -58 409 6 468 269 119 10 chr10 140996949 140997150 -4592138 + MER112 DNA MER1_type 10 232 -28 866 295 95 27 chr10 140997807 140998396 -4590892 - L1MC5 LINE L1 -32 7929 7301 378 228 41 67 chr10 140998548 140998737 -4590551 - L1MC4a LINE L1 -632 7224 7039 1783 178 0 27 chr10 140998737 140999030 -4590258 + AluJb SINE Alu 1 285 -27 378 228 41 67 chr10 140999030 140999041 -4590247 - L1MC4a LINE L1 -817 7039 7029 2014 193 48 21 chr10 140999888 141000307 -4588981 - MSTB1 LTR MaLR 0 432 3 2397 122 8 19 chr10 141000666 141001034 -4588254 + THE1B LTR MaLR 1 364 0 24 0 0 0 chr10 141001482 141001506 -4587782 + AT_rich Low_complexity Low_complexity 1 24 0 583 265 9 3 chr10 141002949 141003096 -4586192 + MIR SINE MIR 14 159 -49 632 215 47 7 chr10 141003956 141004105 -4585183 - MER20 DNA MER1_type 0 219 65 460 306 36 58 chr10 141005130 141005489 -4583799 + MLT2F LTR ERVL 280 630 -33 2900 87 0 11 chr10 141005697 141006076 -4583212 - THE1C LTR MaLR 0 375 1 21 0 0 0 chr10 141006349 141006370 -4582918 + AT_rich Low_complexity Low_complexity 1 21 0 560 129 10 0 chr10 141009329 141009430 -4579858 + (TG)n Simple_repeat Simple_repeat 1 102 0 24 67 0 0 chr10 141010608 141010653 -4578635 + AT_rich Low_complexity Low_complexity 1 45 0 7782 23 17 0 chr10 141010708 141011692 -4577596 - L1PA3 LINE L1 0 6155 5168 1358 253 30 33 chr10 141011996 141012391 -4576897 - MLT1E LTR MaLR 0 593 200 548 229 131 0 chr10 141012485 141012638 -4576650 - MLT1E LTR MaLR -420 173 1 26 0 0 0 chr10 141013008 141013034 -4576254 + AT_rich Low_complexity Low_complexity 1 26 0 230 250 0 0 chr10 141013157 141013209 -4576079 + HAL1b LINE L1 433 484 -864 653 312 205 25 chr10 141013654 141014244 -4575044 + L1ME3 LINE L1 4530 5225 -921 801 151 34 10 chr10 141014483 141014775 -4574513 + (TAGA)n Simple_repeat Simple_repeat 1 299 0 1018 109 35 17 chr10 141014879 141015230 -4574058 + (TAGA)n Simple_repeat Simple_repeat 1 358 0 292 308 143 34 chr10 141015274 141015511 -4573777 + L1ME3 LINE L1 5512 5774 -347 2249 105 3 43 chr10 141016838 141017163 -4572125 - AluSx SINE Alu 0 312 1 23 0 0 0 chr10 141018843 141018866 -4570422 + AT_rich Low_complexity Low_complexity 1 23 0 450 231 56 0 chr10 141019822 141019965 -4569323 - L1MB4 LINE L1 -1 6179 6029 231 61 0 0 chr10 141021737 141021770 -4567518 + (A)n Simple_repeat Simple_repeat 1 33 0 218 265 0 0 chr10 141026352 141026401 -4562887 + L2 LINE L2 3265 3313 0 2498 119 8 5 chr10 141030592 141030986 -4558302 + Tigger1 DNA MER2_type 2024 2418 0 346 330 49 49 chr10 141030987 141031190 -4558098 + L1ME3 LINE L1 5773 5975 -187 483 309 151 0 chr10 141031657 141031935 -4557353 - L1ME4a LINE L1 -244 5877 5558 37 23 0 0 chr10 141032301 141032345 -4556943 + AT_rich Low_complexity Low_complexity 1 44 0 312 326 106 18 chr10 141034875 141035102 -4554186 - MIR SINE MIR -14 248 2 267 310 0 0 chr10 141035893 141035964 -4553324 + (CA)n Simple_repeat Simple_repeat 1 71 0 441 239 0 26 chr10 141038538 141038651 -4550637 - MLT1D LTR MaLR 0 505 396 335 306 90 0 chr10 141039333 141039507 -4549781 + MIR SINE MIR 37 225 -37 985 252 53 48 chr10 141039875 141040287 -4549001 - MLT1C LTR MaLR -2 465 52 638 205 33 20 chr10 141041904 141042055 -4547233 - L1ME3 LINE L1 -13 6149 5997 533 253 26 37 chr10 141042097 141042287 -4547001 + L1ME2 LINE L1 5810 5997 -167 1295 194 0 24 chr10 141043095 141043342 -4545946 - AluJo SINE Alu -20 292 52 216 0 0 0 chr10 141047273 141047297 -4541991 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 1179 148 44 4 chr10 141049989 141050218 -4539070 - L1MB4 LINE L1 -6 6174 5937 2541 125 5 5 chr10 141051255 141051630 -4537658 + THE1C LTR MaLR 1 375 0 331 88 18 18 chr10 141053096 141053153 -4536135 - MER96 DNA MER1_type? 0 175 119 300 265 224 0 chr10 141056577 141056675 -4532613 - MIR3 SINE MIR -7 201 82 1911 174 23 23 chr10 141056686 141056997 -4532291 - MLT1B LTR MaLR 0 390 77 1728 229 88 0 chr10 141056997 141057381 -4531907 + MER47B DNA MER2_type 1 418 0 1911 174 23 23 chr10 141057381 141057459 -4531829 - MLT1B LTR MaLR -312 78 1 1014 286 8 4 chr10 141057983 141058231 -4531057 - MIR SINE MIR -6 256 8 593 208 0 7 chr10 141058462 141058606 -4530682 + CT-rich Low_complexity Low_complexity 4 146 0 2443 253 106 39 chr10 141058700 141059805 -4529483 + L1MC4 LINE L1 6456 7634 -408 225 253 36 0 chr10 141059852 141059935 -4529353 + L1MC4 LINE L1 7956 8041 -1 3488 127 25 10 chr10 141059979 141060498 -4528790 + MER1A DNA MER1_type 1 527 0 542 330 38 0 chr10 141060635 141060902 -4528386 + L1ME LINE L1 5522 5798 -323 2173 116 0 3 chr10 141063007 141063300 -4525988 + AluSg SINE Alu 1 292 -18 21 0 0 0 chr10 141066733 141066754 -4522534 + AT_rich Low_complexity Low_complexity 1 21 0 279 305 0 67 chr10 141067401 141067506 -4521782 + MIR SINE MIR 84 181 -81 2098 105 73 41 chr10 141067718 141068061 -4521227 - THE1B LTR MaLR 0 364 11 1477 179 57 3 chr10 141068712 141069009 -4520279 + L1MA5 LINE L1 5986 6298 -2 448 316 23 0 chr10 141069324 141069457 -4519831 + L2 LINE L2 3178 3313 0 415 258 81 16 chr10 141069468 141069592 -4519696 + L2 LINE L2 3141 3272 0 1357 180 18 0 chr10 141070987 141071204 -4518084 + MER58A DNA MER1_type 1 221 -3 527 327 37 14 chr10 141071231 141071445 -4517843 - MIR SINE MIR -11 251 33 191 188 0 0 chr10 141071718 141071750 -4517538 - L2 LINE L2 -2 3270 3239 297 209 0 0 chr10 141072351 141072418 -4516870 + CT-rich Low_complexity Low_complexity 2 68 0 34 0 0 0 chr10 141074650 141074684 -4514604 + AT_rich Low_complexity Low_complexity 1 34 0 294 50 0 0 chr10 141078512 141078552 -4510736 + (TG)n Simple_repeat Simple_repeat 2 41 0 21 36 0 0 chr10 141080347 141080375 -4508913 + AT_rich Low_complexity Low_complexity 1 28 0 1561 181 8 4 chr10 141083823 141084088 -4505200 + Tigger7 DNA MER2_type 1 266 -284 556 162 10 20 chr10 141084089 141084188 -4505100 + Tigger7 DNA MER2_type 2394 2491 0 606 79 0 0 chr10 141086123 141086199 -4503089 - AluY SINE Alu -18 293 218 180 303 101 18 chr10 141087351 141087460 -4501828 + L2 LINE L2 3154 3271 -1 2032 115 3 14 chr10 141088061 141088357 -4500931 - AluY SINE Alu -18 293 1 188 197 33 98 chr10 141088610 141088671 -4500617 - MIR SINE MIR -68 140 84 301 211 0 21 chr10 141089125 141089220 -4500068 + CT-rich Low_complexity Low_complexity 4 96 0 233 29 29 0 chr10 141090513 141090547 -4498741 + (TG)n Simple_repeat Simple_repeat 2 36 0 292 224 20 92 chr10 141096384 141096536 -4492752 + L2 LINE L2 3132 3272 -41 195 42 0 0 chr10 141098068 141098092 -4491196 + (TA)n Simple_repeat Simple_repeat 2 25 0 2328 105 20 0 chr10 141100912 141101296 -4487992 + AluSq SINE Alu 1 390 0 245 306 15 67 chr10 141101642 141101776 -4487512 - L2 LINE L2 -52 3220 3094 225 322 89 0 chr10 141102332 141102422 -4486866 + MIR3 SINE MIR 87 184 -24 2493 70 0 0 chr10 141104879 141105180 -4484108 - AluY SINE Alu -10 301 1 294 73 0 0 chr10 141107078 141107119 -4482169 + (TG)n Simple_repeat Simple_repeat 1 41 0 2406 88 10 3 chr10 141107163 141107469 -4481819 + AluSq SINE Alu 1 308 -5 604 131 140 0 chr10 141107717 141107824 -4481464 + MLT1D LTR MaLR 71 192 -313 993 304 99 37 chr10 141108273 141109119 -4480169 + L2 LINE L2 1781 2679 -635 237 325 48 0 chr10 141109344 141109470 -4479818 + L1MEc LINE L1 1536 1667 -4729 822 258 117 61 chr10 141109609 141110382 -4478906 + L1MEc LINE L1 1880 2669 -3546 30 45 0 0 chr10 141110406 141110450 -4478838 + AT_rich Low_complexity Low_complexity 1 44 0 270 227 40 40 chr10 141110452 141110628 -4478660 + (TA)n Simple_repeat Simple_repeat 2 177 0 228 316 19 71 chr10 141110684 141110728 -4478560 + L1MEc LINE L1 2753 2798 -3417 2334 122 19 26 chr10 141110728 141111106 -4478182 + THE1C LTR MaLR 1 375 0 228 316 19 71 chr10 141111106 141111216 -4478072 + L1MEc LINE L1 2798 2899 -3316 3007 233 48 23 chr10 141111422 141111924 -4477364 + L1M4 LINE L1 2217 2754 -3392 402 21 0 0 chr10 141111924 141111971 -4477317 + (CA)n Simple_repeat Simple_repeat 2 48 0 3007 233 48 23 chr10 141111971 141112375 -4476913 + L1M4 LINE L1 2754 3146 -3000 521 295 42 35 chr10 141112370 141112794 -4476494 + L1MEc LINE L1 2767 3193 -3022 * 1102 292 91 27 chr10 141112801 141113695 -4475593 + L1MEc LINE L1 3356 4306 -1909 35 63 0 0 chr10 141113695 141113758 -4475530 + AT_rich Low_complexity Low_complexity 1 63 0 268 216 0 0 chr10 141114078 141114129 -4475159 + L1ME LINE L1 5668 5718 -452 180 0 0 0 chr10 141114140 141114160 -4475128 + (GA)n Simple_repeat Simple_repeat 2 21 0 943 306 89 43 chr10 141114161 141115296 -4473992 + L1MEc LINE L1 4739 5936 -303 1019 215 120 67 chr10 141116857 141117150 -4472138 + MLT1C LTR MaLR 6 331 -136 1547 112 27 5 chr10 141117150 141117374 -4471914 + MER30 DNA MER1_type 1 229 -1 1019 215 120 67 chr10 141117374 141117513 -4471775 + MLT1C LTR MaLR 331 461 -6 25 31 0 0 chr10 141117547 141117579 -4471709 + AT_rich Low_complexity Low_complexity 1 32 0 489 214 0 0 chr10 141117780 141117869 -4471419 - Tigger7 DNA MER2_type -3 2484 2396 2830 181 29 18 chr10 141117870 141118299 -4470989 - Tigger7 DNA MER2_type -1967 520 83 2660 97 11 11 chr10 141118299 141118672 -4470616 + THE1C LTR MaLR 1 373 -2 2830 181 29 18 chr10 141118672 141118756 -4470532 - Tigger7 DNA MER2_type -2404 83 1 302 215 28 28 chr10 141118997 141119125 -4470163 + Charlie5 DNA MER1_type 1 93 -2519 2238 104 0 7 chr10 141119136 141119435 -4469853 + AluSg1 SINE Alu 1 297 -12 1453 187 49 68 chr10 141119543 141119912 -4469376 - MLT1A1 LTR MaLR 0 365 4 1497 280 105 23 chr10 141121591 141122628 -4466660 + L1M4 LINE L1 2223 3344 -2802 3277 167 26 14 chr10 141122648 141123040 -4466248 - L1MA9 LINE L1 -436 5876 5470 778 89 0 16 chr10 141123040 141123163 -4466125 + (TTC)n Simple_repeat Simple_repeat 2 122 0 3277 167 26 14 chr10 141123163 141123429 -4465859 - L1MA9 LINE L1 -842 5470 5209 901 150 43 32 chr10 141123429 141123616 -4465672 + L1MB1 LINE L1 5876 6064 -104 * 2801 162 22 33 chr10 141123610 141124051 -4465237 + L1PB4 LINE L1 4885 5329 -827 2410 86 0 6 chr10 141124051 141124364 -4464924 + AluY SINE Alu 1 311 0 2801 162 22 33 chr10 141124364 141124528 -4464760 + L1PB4 LINE L1 5329 5493 -663 2125 123 13 0 chr10 141124528 141124828 -4464460 + AluSq SINE Alu 1 304 -9 2801 162 22 33 chr10 141124828 141125114 -4464174 + L1PB4 LINE L1 5493 5776 -380 207 0 0 0 chr10 141125114 141125137 -4464151 + (TG)n Simple_repeat Simple_repeat 2 24 0 189 147 0 0 chr10 141125159 141125193 -4464095 + (CATATA)n Simple_repeat Simple_repeat 2 35 0 184 188 0 0 chr10 141125307 141125339 -4463949 + CT-rich Low_complexity Low_complexity 2 33 0 285 295 33 0 chr10 141125368 141125490 -4463798 + T-rich Low_complexity Low_complexity 5 130 0 222 286 0 0 chr10 141125565 141125628 -4463660 + T-rich Low_complexity Low_complexity 1 63 0 243 119 34 17 chr10 141125969 141126028 -4463260 + (CA)n Simple_repeat Simple_repeat 1 60 0 2326 149 19 16 chr10 141126028 141126391 -4462897 + L1PB4 LINE L1 5782 6145 -11 1880 263 109 24 chr10 141126424 141127211 -4462077 + L1ME3 LINE L1 5262 6115 -47 29 47 0 0 chr10 141127836 141127879 -4461409 + AT_rich Low_complexity Low_complexity 1 43 0 301 203 0 73 chr10 141127966 141128063 -4461225 + L1M LINE L1 5258 5347 -2478 255 259 17 0 chr10 141128638 141128696 -4460592 + (TATATG)n Simple_repeat Simple_repeat 4 62 0 292 302 88 28 chr10 141128980 141129162 -4460126 - L1ME LINE L1 -543 5578 5386 1202 272 53 15 chr10 141129327 141129856 -4459432 + L1M4 LINE L1 3792 4340 -1806 5888 108 46 15 chr10 141129856 141130876 -4458412 + L1PA16 LINE L1 5114 6157 -9 258 171 40 13 chr10 141130891 141130967 -4458321 - L1M4 LINE L1 -1686 4460 4383 252 274 147 11 chr10 141131372 141131467 -4457821 - L2 LINE L2 -8 3305 3198 511 195 127 0 chr10 141133187 141133305 -4455983 - MER69 DNA AcHobo 0 2526 2394 468 216 8 96 chr10 141133589 141133714 -4455574 + MER81 DNA DNA 1 114 0 574 202 168 70 chr10 141134619 141134976 -4454312 - L1MC5 LINE L1 -51 7910 7519 264 242 16 0 chr10 141134988 141135050 -4454238 + CT-rich Low_complexity Low_complexity 1 63 0 855 209 48 5 chr10 141135189 141135376 -4453912 - MER20 DNA MER1_type -3 216 22 226 214 24 0 chr10 141136277 141136361 -4452927 + GA-rich Low_complexity Low_complexity 4 89 0 180 125 0 0 chr10 141136647 141136679 -4452609 + (A)n Simple_repeat Simple_repeat 1 32 0 296 361 74 36 chr10 141136928 141137349 -4451939 + L2 LINE L2 926 1362 -1952 273 329 46 26 chr10 141137359 141137511 -4451777 - LTR16C LTR ERVL 0 491 337 6163 186 28 19 chr10 141137564 141138847 -4450441 - L1MA7 LINE L1 -1204 4942 3649 4585 160 73 35 chr10 141138844 141139897 -4449391 + L1MA7 LINE L1 4952 6062 -229 * 2334 115 3 0 chr10 141139897 141140202 -4449086 + AluSg SINE Alu 1 306 -4 4585 160 73 35 chr10 141140202 141140441 -4448847 + L1MA7 LINE L1 6062 6291 0 40 0 0 0 chr10 141140523 141140563 -4448725 + AT_rich Low_complexity Low_complexity 1 40 0 253 355 19 9 chr10 141141255 141141362 -4447926 + L2 LINE L2 3160 3267 -5 549 293 72 7 chr10 141141584 141141874 -4447414 + L1M4 LINE L1 2669 2977 -3169 346 263 143 8 chr10 141141875 141142008 -4447280 + L1ME2 LINE L1 6000 6150 -14 234 260 78 45 chr10 141142101 141142255 -4447033 + L1M4 LINE L1 3111 3269 -2877 3467 246 74 47 chr10 141142605 141143550 -4445738 + L1ME3A LINE L1 2327 3328 -2818 1266 238 13 3 chr10 141143550 141143852 -4445436 + AluJb SINE Alu 1 305 -7 3467 246 74 47 chr10 141143852 141144401 -4444887 + L1ME3A LINE L1 3328 3861 -2285 1464 286 119 32 chr10 141144440 141144774 -4444514 + L1ME3A LINE L1 4738 5042 -1128 2175 135 0 0 chr10 141144774 141145078 -4444210 - AluSg SINE Alu -6 304 1 1464 286 119 32 chr10 141145078 141145848 -4443440 + L1ME3A LINE L1 5042 5940 -230 444 289 65 70 chr10 141146004 141146617 -4442671 + L1M4 LINE L1 3348 3957 -2189 229 257 57 43 chr10 141147178 141147388 -4441900 + L1ME3A LINE L1 4421 4633 -1513 587 321 114 25 chr10 141148021 141148416 -4440872 + L2 LINE L2 2430 2859 -455 441 309 107 33 chr10 141149080 141149417 -4439871 + L1ME3A LINE L1 5582 5943 -227 2218 105 0 37 chr10 141149752 141150076 -4439212 + AluSx SINE Alu 1 312 0 335 311 74 0 chr10 141151209 141151344 -4437944 + L1M4 LINE L1 4043 4187 -1959 2513 52 3 0 chr10 141151615 141151923 -4437365 + AluY SINE Alu 1 309 -2 302 267 104 30 chr10 141151983 141152185 -4437103 + L1M4 LINE L1 4343 4559 -1587 792 240 71 46 chr10 141152232 141152598 -4436690 - L1ME1 LINE L1 -5 6161 5787 248 229 0 14 chr10 141153209 141153279 -4436009 + L1M LINE L1 5347 5415 -889 221 287 62 78 chr10 141154151 141154280 -4435008 - MIR SINE MIR -132 130 4 229 269 97 91 chr10 141154339 141154648 -4434640 - L2 LINE L2 -356 2958 2648 271 339 23 62 chr10 141157410 141157540 -4431748 + MIR SINE MIR 23 147 -61 359 288 47 39 chr10 141158410 141158643 -4430645 + MER112 DNA MER1_type 13 247 -13 582 133 0 0 chr10 141158646 141158744 -4430544 - L1ME1 LINE L1 -683 5483 5386 342 286 0 0 chr10 141159120 141159218 -4430070 + CT-rich Low_complexity Low_complexity 2 99 0 2002 121 0 4 chr10 141160000 141160316 -4428972 - AluSx SINE Alu 0 320 6 1905 171 9 12 chr10 141160634 141160968 -4428320 - MER44D DNA MER2_type 0 609 7 377 279 111 34 chr10 141161832 141162094 -4427194 - LTR16A LTR ERVL -77 373 92 302 336 55 0 chr10 141162435 141162581 -4426707 + MIR SINE MIR 37 190 -72 2080 119 7 3 chr10 141163223 141163517 -4425771 + AluSg SINE Alu 1 295 -15 238 269 204 11 chr10 141163608 141163701 -4425587 - L2 LINE L2 -1 3312 3202 768 112 9 0 chr10 141163836 141163952 -4425336 + AluSg/x SINE Alu 194 310 0 315 0 0 0 chr10 141166041 141166076 -4423212 + (GA)n Simple_repeat Simple_repeat 2 36 0 2167 126 0 0 chr10 141168212 141168506 -4420782 - AluSx SINE Alu -18 294 1 252 188 30 79 chr10 141170310 141170411 -4418877 + MER51-int LTR ERV1 1325 1420 -6396 243 0 0 0 chr10 141171700 141171727 -4417561 + (A)n Simple_repeat Simple_repeat 1 27 0 252 219 109 0 chr10 141172862 141172926 -4416362 + L2 LINE L2 3216 3286 -27 424 279 70 77 chr10 141173436 141174226 -4415062 + L1MC4a LINE L1 4136 4919 -1227 215 146 62 0 chr10 141174412 141174460 -4414828 + MER91B DNA MER1_type 80 130 -60 22 56 0 0 chr10 141174672 141174708 -4414580 + AT_rich Low_complexity Low_complexity 1 36 0 21 71 0 0 chr10 141174869 141174911 -4414377 + AT_rich Low_complexity Low_complexity 1 42 0 201 246 123 0 chr10 141175035 141175092 -4414196 + L2 LINE L2 3216 3279 -34 238 294 0 0 chr10 141175131 141175182 -4414106 + MER91B DNA MER1_type 129 179 -11 216 0 0 0 chr10 141175417 141175441 -4413847 + (A)n Simple_repeat Simple_repeat 1 24 0 568 334 99 47 chr10 141175585 141176049 -4413239 + L1MC4a LINE L1 5353 5840 -1968 202 189 0 0 chr10 141177095 141177132 -4412156 + G-rich Low_complexity Low_complexity 3 39 0 25 31 0 0 chr10 141177815 141177847 -4411441 + AT_rich Low_complexity Low_complexity 1 32 0 644 269 101 48 chr10 141177914 141178349 -4410939 + L1MC4 LINE L1 7491 7948 -94 3883 195 66 23 chr10 141179158 141179356 -4409932 - L1MB7 LINE L1 -23 6161 5973 1677 143 3 49 chr10 141179356 141179664 -4409624 - AluJb SINE Alu -18 294 1 3883 195 66 23 chr10 141179664 141181154 -4408134 - L1MB7 LINE L1 -211 5973 4393 833 250 95 16 chr10 141181244 141181496 -4407792 - L1MB7 LINE L1 -1917 4229 3958 291 240 110 20 chr10 141181644 141181790 -4407498 + L1ME4a LINE L1 5957 6115 -6 261 139 0 0 chr10 141181856 141181899 -4407389 + (GA)n Simple_repeat Simple_repeat 1 43 0 227 167 0 0 chr10 141183248 141183284 -4406004 - MER58 DNA MER1_type -2 2418 2383 * 1110 218 34 19 chr10 141183273 141183535 -4405753 - MER58 DNA MER1_type -57 284 19 25 65 0 0 chr10 141185380 141185426 -4403862 + GC_rich Low_complexity Low_complexity 1 46 0 200 250 0 0 chr10 141188807 141188847 -4400441 + (TAA)n Simple_repeat Simple_repeat 1 40 0 388 305 42 0 chr10 141192334 141192452 -4396836 + MIR SINE MIR 63 185 -77 378 291 22 34 chr10 141193838 141194017 -4395271 + (TATG)n Simple_repeat Simple_repeat 2 178 0 296 238 9 0 chr10 141195841 141195946 -4393342 + CT-rich Low_complexity Low_complexity 3 108 0 704 210 19 1 chr10 141198363 141198539 -4390749 + L1ME1 LINE L1 5663 5840 -322 265 279 130 25 chr10 141199271 141199432 -4389856 + MIR SINE MIR 79 256 -6 194 234 0 13 chr10 141199898 141199975 -4389313 + (CA)n Simple_repeat Simple_repeat 1 76 0 343 212 161 17 chr10 141199975 141200093 -4389195 - MIR SINE MIR -58 204 70 579 221 79 107 chr10 141200842 141201306 -4387982 - MLT1A2 LTR MaLR 0 451 6 402 340 65 33 chr10 141201447 141201936 -4387352 - HAL1 LINE L1 -767 1740 1236 1205 205 55 3 chr10 141206092 141206399 -4382889 - MER33 DNA MER1_type 0 324 2 195 42 0 0 chr10 141207792 141207816 -4381472 + (CA)n Simple_repeat Simple_repeat 1 24 0 353 186 87 20 chr10 141207820 141207941 -4381347 + L1MC3 LINE L1 1996 6926 -1139 303 93 0 0 chr10 141207945 141207988 -4381300 + (GA)n Simple_repeat Simple_repeat 2 44 0 363 89 0 0 chr10 141210501 141210557 -4378731 + (GA)n Simple_repeat Simple_repeat 1 56 0 182 297 62 16 chr10 141212178 141212242 -4377046 + L2 LINE L2 3186 3252 -20 225 344 121 25 chr10 141212485 141212642 -4376646 + MIR SINE MIR 79 250 -12 258 326 33 0 chr10 141212892 141212984 -4376304 - L1ME4a LINE L1 -58 6063 5969 239 163 0 20 chr10 141213023 141213072 -4376216 - L1M3 LINE L1 -516 5818 5771 319 205 68 75 chr10 141213299 141213544 -4375744 - L1M3 LINE L1 -851 5508 5264 282 241 0 0 chr10 141216542 141216629 -4372659 + (CA)n Simple_repeat Simple_repeat 1 87 0 460 293 122 24 chr10 141220654 141220859 -4368429 - MIR SINE MIR -24 238 14 258 239 28 14 chr10 141222406 141222477 -4366811 - L2 LINE L2 -8 3264 3193 1655 151 0 27 chr10 141223613 141223912 -4365376 - AluJb SINE Alu -21 291 1 282 208 231 16 chr10 141224254 141224418 -4364870 - MIR3 SINE MIR -52 210 3 188 313 82 45 chr10 141225155 141225289 -4363999 - L2 LINE L2 -92 3180 3042 2613 224 58 58 chr10 141227241 141228141 -4361147 + L1ME1 LINE L1 4126 5025 -1121 1130 247 76 0 chr10 141228132 141228436 -4360852 + L1ME1 LINE L1 5543 5869 -297 * 771 275 147 36 chr10 141228473 141228921 -4360367 + L1ME1 LINE L1 5651 6148 -18 408 165 82 0 chr10 141229277 141229362 -4359926 + MLT1B LTR MaLR 1 92 -298 1147 99 19 0 chr10 141229362 141229524 -4359764 - AluY SINE Alu -13 298 134 1535 200 9 25 chr10 141229524 141229839 -4359449 + MLT1B LTR MaLR 81 390 0 2106 117 3 0 chr10 141231779 141232100 -4357188 + AluSp SINE Alu 1 322 0 325 250 22 0 chr10 141233322 141233414 -4355874 - MLT1K LTR MaLR -3 585 492 186 143 0 0 chr10 141233507 141233542 -4355746 + (TC)n Simple_repeat Simple_repeat 1 35 0 206 118 0 0 chr10 141234777 141234811 -4354477 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 182 222 0 0 chr10 141234828 141234864 -4354424 + L2 LINE L2 3037 3072 -241 233 253 13 38 chr10 141234955 141235034 -4354254 + L2 LINE L2 3194 3270 -2 752 193 128 11 chr10 141240865 141241052 -4348236 + L1MD3 LINE L1 7714 7922 -73 187 325 238 0 chr10 141241354 141241480 -4347808 + L2 LINE L2 2898 3053 -219 767 253 23 0 chr10 141242505 141242679 -4346609 - MER45A DNA AcHobo 0 178 1 216 0 0 0 chr10 141245177 141245201 -4344087 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 186 344 16 0 chr10 141246441 141246505 -4342783 - L2 LINE L2 -21 3251 3187 423 0 0 0 chr10 141247124 141247171 -4342117 + (TG)n Simple_repeat Simple_repeat 1 47 0 2133 132 24 43 chr10 141247427 141247798 -4341490 + THE1B LTR MaLR 1 364 0 7196 88 2 4 chr10 141247799 141248728 -4340560 + THE1B-int LTR MaLR 2 928 -652 1327 113 5 0 chr10 141248724 141248910 -4340378 + THE1B-int LTR MaLR 1394 1580 0 * 2274 137 19 25 chr10 141248910 141249276 -4340012 + THE1B LTR MaLR 1 364 0 510 255 53 43 chr10 141250439 141250627 -4338661 - MIR SINE MIR -29 233 44 23 33 0 0 chr10 141251959 141251989 -4337299 + AT_rich Low_complexity Low_complexity 1 30 0 2519 174 28 60 chr10 141252657 141253391 -4335897 + L1MA9 LINE L1 5588 6258 -33 2256 114 0 0 chr10 141253735 141254041 -4335247 + AluSq SINE Alu 1 306 -7 1103 245 19 7 chr10 141255116 141255478 -4333810 - MER63 DNA MER1_type -2 1059 7 692 274 63 36 chr10 141257218 141257534 -4331754 + MLT1I LTR MaLR 93 404 -5 1794 149 40 0 chr10 141257677 141257952 -4331336 - AluJb SINE Alu -26 286 1 428 192 0 39 chr10 141257952 141258030 -4331258 + AluJb SINE Alu 115 189 -123 2224 123 3 0 chr10 141258542 141258851 -4330437 - AluSg SINE Alu 0 310 1 5897 51 0 14 chr10 141259066 141259805 -4329483 - L1PA7 LINE L1 0 6154 5426 5266 172 27 18 chr10 141259991 141261077 -4328211 - L1MA9 LINE L1 0 6312 5218 514 223 99 33 chr10 141261110 141261321 -4327967 - L1MC/D LINE L1 -2005 5803 5579 216 167 0 0 chr10 141261568 141261616 -4327672 + T-rich Low_complexity Low_complexity 2 49 0 2052 128 0 29 chr10 141262092 141262404 -4326884 - AluSg SINE Alu -7 303 1 242 284 9 37 chr10 141263752 141263861 -4325427 + (TATATG)n Simple_repeat Simple_repeat 1 106 0 1673 279 59 60 chr10 141264062 141265852 -4323436 + L1ME3A LINE L1 4076 5865 -305 2352 107 0 0 chr10 141265852 141266160 -4323128 - AluSg SINE Alu -2 308 1 1673 279 59 60 chr10 141266160 141266461 -4322827 + L1ME3A LINE L1 5865 6165 -5 523 306 26 21 chr10 141267292 141267485 -4321803 + L1ME LINE L1 5567 5760 -361 461 162 203 7 chr10 141267592 141267740 -4321548 - MER69A DNA AcHobo 0 177 1 21 36 0 0 chr10 141268940 141268968 -4320320 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr10 141269018 141269047 -4320241 + AT_rich Low_complexity Low_complexity 1 29 0 666 286 132 8 chr10 141269249 141269620 -4319668 - LTR33 LTR ERVL -67 454 38 375 213 228 81 chr10 141270128 141270264 -4319024 + MER20 DNA MER1_type 3 158 -61 429 122 0 0 chr10 141270367 141270441 -4318847 + (TGGA)n Simple_repeat Simple_repeat 2 75 0 735 268 114 28 chr10 141272223 141272540 -4316748 - MLT1C LTR MaLR -2 465 122 467 216 0 0 chr10 141272537 141272624 -4316664 + MLT2D LTR ERVL 5 91 -323 451 133 13 0 chr10 141272624 141272699 -4316589 + MLT2B1 LTR ERVL 1 76 -444 2322 81 3 0 chr10 141272704 141272988 -4316300 + AluSx SINE Alu 7 291 -21 258 32 0 0 chr10 141273007 141273038 -4316250 + (CA)n Simple_repeat Simple_repeat 2 32 0 1518 224 87 37 chr10 141273082 141273563 -4315725 + MLT1D LTR MaLR 1 505 0 510 281 0 0 chr10 141273563 141273871 -4315417 + (CA)n Simple_repeat Simple_repeat 1 308 0 273 256 0 0 chr10 141273963 141274045 -4315243 + (CA)n Simple_repeat Simple_repeat 1 82 0 275 183 0 33 chr10 141274048 141274108 -4315180 - L1MC4 LINE L1 -1339 6703 6646 295 213 0 16 chr10 141275029 141275090 -4314198 - LTR33 LTR ERVL -6 515 456 1409 178 11 81 chr10 141275986 141276334 -4312954 - MLT2D LTR ERVL 0 414 91 21 0 0 0 chr10 141277506 141277527 -4311761 + AT_rich Low_complexity Low_complexity 1 21 0 270 357 28 0 chr10 141278134 141278277 -4311011 + L3 LINE CR1 1085 1231 -346 445 198 0 59 chr10 141281031 141281132 -4308156 + AluJ/FLAM SINE Alu 6 100 -212 324 136 7 17 chr10 141281143 141281198 -4308090 - AluJ/FLAM SINE Alu -207 95 51 201 154 0 0 chr10 141281214 141281253 -4308035 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 214 315 22 11 chr10 141282178 141282270 -4307018 - L2 LINE L2 -5 3267 3175 * 417 311 88 13 chr10 141282237 141282475 -4306813 - MIR SINE MIR -5 257 2 180 329 22 29 chr10 141282595 141282732 -4306556 + L2 LINE L2 2826 2961 -311 276 255 37 37 chr10 141283478 141283639 -4305649 + LTR16A1 LTR ERVL 296 456 -1 1113 232 53 38 chr10 141283867 141284264 -4305024 - MLT1C LTR MaLR 0 467 65 2300 158 15 49 chr10 141284978 141285418 -4303870 + MSTC LTR MaLR 3 427 -1 23 68 0 0 chr10 141285949 141285993 -4303295 + AT_rich Low_complexity Low_complexity 1 44 0 2301 114 3 0 chr10 141286279 141286585 -4302703 - AluSx SINE Alu -4 308 2 248 224 0 0 chr10 141288348 141288397 -4300891 + HsTC2 DNA Tc2 36 84 -1814 281 258 75 11 chr10 141288496 141288589 -4300699 - MIR SINE MIR -115 147 49 287 136 17 0 chr10 141288829 141288888 -4300400 + GA-rich Low_complexity Low_complexity 2 61 0 261 243 0 0 chr10 141290984 141291058 -4298230 + (TA)n Simple_repeat Simple_repeat 1 74 0 333 304 13 0 chr10 141291073 141291231 -4298057 + (CATATA)n Simple_repeat Simple_repeat 6 165 0 * 352 276 17 28 chr10 141291150 141291331 -4297957 + (TA)n Simple_repeat Simple_repeat 1 179 0 875 200 3 0 chr10 141291336 141291734 -4297554 + (TGGA)n Simple_repeat Simple_repeat 1 399 0 648 244 0 0 chr10 141291746 141291926 -4297362 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 2300 82 0 0 chr10 141292641 141292922 -4296366 - AluY SINE Alu -26 285 5 1324 239 45 58 chr10 141295040 141295165 -4294123 + MLT1C LTR MaLR 10 135 -332 2123 150 5 53 chr10 141295165 141295530 -4293758 - THE1C LTR MaLR 0 375 29 2164 106 0 0 chr10 141295530 141295805 -4293483 + AluSx SINE Alu 21 295 -17 2123 150 5 53 chr10 141295805 141295833 -4293455 - THE1C LTR MaLR -346 29 1 1324 239 45 58 chr10 141295833 141296171 -4293117 + MLT1C LTR MaLR 135 467 0 1945 132 3 39 chr10 141297156 141297467 -4291821 - AluSx SINE Alu -12 300 1 8725 114 15 5 chr10 141303554 141304841 -4284447 + HSMAR2 DNA Mariner 2 1301 -1 302 340 78 40 chr10 141305625 141306122 -4283166 + L1ME LINE L1 5311 5826 -295 1939 132 0 17 chr10 141306175 141306491 -4282797 + AluSg SINE Alu 1 311 0 498 222 0 0 chr10 141306537 141306627 -4282661 - MER44D DNA MER2_type -2 607 518 259 263 0 0 chr10 141306627 141306684 -4282604 - MER44D DNA MER2_type -44 561 505 1255 191 111 49 chr10 141306702 141306828 -4282460 + MER2 DNA MER2_type 1 118 -227 1517 106 55 0 chr10 141306828 141307046 -4282242 + MER30 DNA MER1_type 1 230 0 1255 191 111 49 chr10 141307046 141307244 -4282044 + MER2 DNA MER2_type 118 345 0 1071 148 85 36 chr10 141307246 141307469 -4281819 - MER44D DNA MER2_type -105 504 1 2157 125 3 6 chr10 141307492 141307868 -4281420 + AluSq SINE Alu 1 375 0 235 314 13 58 chr10 141308559 141308715 -4280573 + MER5A DNA MER1_type 7 155 -34 231 88 0 0 chr10 141309081 141309115 -4280173 + (TC)n Simple_repeat Simple_repeat 1 34 0 1509 188 4 0 chr10 141309120 141309381 -4279907 - AluSq SINE Alu -51 262 1 341 291 8 16 chr10 141310582 141310709 -4278579 + MIR SINE MIR 25 150 -112 204 258 0 16 chr10 141313525 141313587 -4275701 + (TA)n Simple_repeat Simple_repeat 2 62 0 529 283 89 40 chr10 141318415 141318864 -4270424 + L1MC4 LINE L1 7322 7893 -149 222 346 105 13 chr10 141319440 141319668 -4269620 + L2 LINE L2 2726 2974 -340 492 277 66 24 chr10 141319678 141319891 -4269397 + MIR SINE MIR 31 252 -10 285 128 0 0 chr10 141319891 141319938 -4269350 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 239 288 0 0 chr10 141320592 141320651 -4268637 + L2 LINE L2 3248 3306 -7 110 52 0 0 chr10 141321926 141322099 -4267189 + AT_rich Low_complexity Low_complexity 1 173 0 228 67 0 0 chr10 141322261 141322291 -4266997 + (TG)n Simple_repeat Simple_repeat 1 30 0 324 277 41 83 chr10 141322292 141322534 -4266754 - L1MC4a LINE L1 -1876 5932 5701 318 339 52 39 chr10 141322584 141322814 -4266474 - L1MC4a LINE L1 -532 5589 5357 342 314 94 49 chr10 141323084 141323552 -4265736 - L1MC4a LINE L1 -1082 5064 4576 215 250 39 0 chr10 141323727 141323779 -4265509 + (CATG)n Simple_repeat Simple_repeat 2 55 0 311 344 81 5 chr10 141323859 141324045 -4265243 + L1ME2 LINE L1 686 885 -5511 266 0 29 0 chr10 141324281 141324315 -4264973 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 322 316 43 57 chr10 141324319 141324754 -4264534 + L1ME2 LINE L1 1041 1620 -4773 * 4852 240 45 66 chr10 141324753 141325244 -4264044 + L1ME2 LINE L1 3035 3535 -2698 796 167 39 0 chr10 141325244 141325400 -4263888 - L1MA8 LINE L1 -5 6286 6125 4852 240 45 66 chr10 141325400 141326921 -4262367 + L1ME2 LINE L1 3535 4951 -1282 180 0 0 0 chr10 141326921 141326941 -4262347 + (TAA)n Simple_repeat Simple_repeat 2 21 0 4852 240 45 66 chr10 141326941 141328163 -4261125 + L1ME2 LINE L1 4951 6198 -35 659 276 123 84 chr10 141329157 141329646 -4259642 + MLT1K LTR MaLR 81 588 0 290 213 0 0 chr10 141329833 141329894 -4259394 + HAL1b LINE L1 604 664 -684 36 0 0 0 chr10 141336179 141336215 -4253073 + AT_rich Low_complexity Low_complexity 1 36 0 24 0 0 0 chr10 141337640 141337664 -4251624 + AT_rich Low_complexity Low_complexity 1 24 0 608 222 0 0 chr10 141338911 141339019 -4250269 + Tigger3(Golem) DNA MER2_type 1 108 -2921 * 3590 125 36 112 chr10 141339010 141339824 -4249464 + Tigger3(Golem) DNA MER2_type 2278 3029 0 192 167 42 21 chr10 141340131 141340179 -4249109 - L2 LINE L2 -1 3271 3223 424 299 71 0 chr10 141340895 141341049 -4248239 - Charlie8 DNA MER1_type -2214 203 39 24 85 0 0 chr10 141341263 141341322 -4247966 + AT_rich Low_complexity Low_complexity 1 59 0 427 266 0 0 chr10 141341506 141341600 -4247688 - MIR SINE MIR -85 177 84 307 359 41 14 chr10 141341902 141342047 -4247241 + MIR SINE MIR 2 150 -112 181 333 28 0 chr10 141342342 141342414 -4246874 + MIR SINE MIR 34 107 -101 196 277 43 0 chr10 141343498 141343545 -4245743 - L2 LINE L2 0 3272 3224 1149 179 0 0 chr10 141344950 141345140 -4244148 + MLT1B LTR MaLR 1 190 -200 1106 202 111 98 chr10 141345140 141345294 -4243994 - MER31A LTR ERV1 0 485 334 1908 129 4 0 chr10 141345294 141345573 -4243715 - AluSx SINE Alu -32 280 1 1106 202 111 98 chr10 141345573 141345824 -4243464 - MER31A LTR ERV1 -151 334 75 460 335 47 12 chr10 141345924 141346285 -4243003 + ERVL LTR ERVL 4161 4525 -1129 294 357 46 15 chr10 141346415 141346678 -4242610 + ERVL LTR ERVL 4708 4978 -786 342 138 0 0 chr10 141348019 141348077 -4241211 + (CA)n Simple_repeat Simple_repeat 1 58 0 185 0 40 0 chr10 141349937 141349962 -4239326 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 429 213 0 0 chr10 141349962 141350056 -4239232 - L1MB4 LINE L1 -4 6176 6083 200 326 31 39 chr10 141350230 141350359 -4238929 - L2 LINE L2 -252 3061 2934 * 699 307 95 51 chr10 141350356 141350883 -4238405 - L2 LINE L2 -570 2744 2195 891 180 6 0 chr10 141351055 141351216 -4238072 - AluJb SINE Alu -14 298 137 265 308 26 0 chr10 141352028 141352106 -4237182 + MIR SINE MIR 71 150 -112 2051 106 0 7 chr10 141352113 141352455 -4236833 - AluSx SINE Alu 0 340 1 1707 143 32 4 chr10 141352464 141352744 -4236544 - AluJo SINE Alu -24 288 1 186 270 0 0 chr10 141353180 141353217 -4236071 - MIR SINE MIR -19 243 207 380 286 82 51 chr10 141359039 141359235 -4230053 + MIR SINE MIR 47 248 -14 199 336 72 8 chr10 141359374 141359499 -4229789 + L2 LINE L2 3140 3272 0 192 315 41 0 chr10 141361114 141361187 -4228101 - MIR SINE MIR -4 258 183 223 277 170 43 chr10 141361311 141361405 -4227883 - L2 LINE L2 0 3313 3208 512 325 20 0 chr10 141362366 141362517 -4226771 + L2 LINE L2 3160 3313 0 484 283 144 33 chr10 141362535 141362924 -4226364 - L2 LINE L2 -802 2512 2081 298 246 29 0 chr10 141362997 141363066 -4226222 - L2 LINE L2 0 3313 3243 384 286 0 0 chr10 141367171 141367446 -4221842 + (CA)n Simple_repeat Simple_repeat 1 275 0 345 246 0 0 chr10 141367462 141367580 -4221708 + (CA)n Simple_repeat Simple_repeat 1 118 0 570 233 0 0 chr10 141367604 141367784 -4221504 + (CA)n Simple_repeat Simple_repeat 1 180 0 228 243 0 0 chr10 141367806 141367880 -4221408 + (CA)n Simple_repeat Simple_repeat 1 74 0 414 285 0 0 chr10 141367928 141368222 -4221066 + (CA)n Simple_repeat Simple_repeat 1 294 0 426 304 99 70 chr10 141368620 141368992 -4220296 + L1ME4a LINE L1 5739 6121 0 221 231 29 13 chr10 141369205 141369453 -4219835 + C-rich Low_complexity Low_complexity 1 252 0 252 307 20 0 chr10 141369582 141369683 -4219605 + (CA)n Simple_repeat Simple_repeat 1 103 0 339 260 49 97 chr10 141370410 141370793 -4218495 + L1M2 LINE L1 1385 1908 -761 386 243 124 31 chr10 141371502 141371728 -4217560 + L1M2 LINE L1 2807 3053 -3093 631 304 129 60 chr10 141371732 141372180 -4217108 + L1M2 LINE L1 3106 3584 -2562 560 333 86 40 chr10 141372200 141372629 -4216659 + L1M2 LINE L1 3775 4223 -1923 2335 109 31 14 chr10 141372698 141373056 -4216232 + THE1B LTR MaLR 1 364 0 378 0 0 0 chr10 141373211 141373253 -4216035 + (TG)n Simple_repeat Simple_repeat 2 43 0 1485 173 79 18 chr10 141373842 141374172 -4215116 + L1MC2 LINE L1 5994 6343 -1 2009 167 46 0 chr10 141374180 141374527 -4214761 + L1PA16 LINE L1 5800 6162 -4 575 218 0 45 chr10 141376653 141376786 -4212502 - MER3 DNA MER1_type 0 209 83 1191 249 66 27 chr10 141377579 141377978 -4211310 - MLT1H LTR MaLR 0 590 19 1313 123 0 58 chr10 141377988 141378231 -4211057 - L1MB8 LINE L1 -5 6173 5945 333 47 0 0 chr10 141379398 141379441 -4209847 + (GA)n Simple_repeat Simple_repeat 1 43 0 298 356 44 57 chr10 141380406 141380721 -4208567 - L2 LINE L2 -25 3247 2937 1938 155 152 8 chr10 141381221 141381595 -4207693 + MSTA LTR MaLR 1 428 0 204 234 0 0 chr10 141382293 141382340 -4206948 - L2 LINE L2 -221 3051 3005 1413 252 55 25 chr10 141384147 141384459 -4204829 + L1MCc LINE L1 6 336 -6087 890 107 61 0 chr10 141384459 141384590 -4204698 + MER85 DNA T2_type 1 139 0 1413 252 55 25 chr10 141384590 141384713 -4204575 + L1MCc LINE L1 336 454 -5969 3132 266 51 36 chr10 141385004 141387323 -4201965 + L1MCc LINE L1 821 3341 -3600 3931 37 11 0 chr10 141387384 141387849 -4201439 - L1PA4 LINE L1 0 6155 5686 563 274 67 29 chr10 141388401 141388609 -4200679 - MIR SINE MIR 0 262 47 201 310 70 14 chr10 141389076 141389147 -4200141 - MIR SINE MIR -63 145 71 212 196 22 0 chr10 141391333 141391379 -4197909 + (TG)n Simple_repeat Simple_repeat 2 48 0 185 289 60 36 chr10 141391741 141391824 -4197464 + L2 LINE L2 3174 3258 -55 1911 138 55 28 chr10 141392152 141392515 -4196773 + THE1C LTR MaLR 1 373 -2 1760 167 0 0 chr10 141393650 141393943 -4195345 - AluJo SINE Alu -11 301 9 254 265 319 0 chr10 141394058 141394184 -4195104 - MIR SINE MIR -62 146 4 304 263 53 46 chr10 141395218 141395331 -4193957 + MIR SINE MIR 38 152 -56 310 263 74 45 chr10 141398133 141398313 -4190975 - MIR SINE MIR -62 200 15 875 284 19 15 chr10 141400623 141400887 -4188401 + L1MDa LINE L1 19 283 -6257 180 0 0 0 chr10 141400887 141400907 -4188381 + (A)n Simple_repeat Simple_repeat 1 20 0 3274 238 94 30 chr10 141400966 141401967 -4187321 + L1MD2 LINE L1 5090 6181 -178 225 65 0 0 chr10 141401967 141401998 -4187290 + (CA)n Simple_repeat Simple_repeat 2 32 0 3274 238 94 30 chr10 141401998 141402180 -4187108 + L1MD2 LINE L1 6181 6350 -9 204 208 42 0 chr10 141402491 141402563 -4186725 + (TA)n Simple_repeat Simple_repeat 1 75 0 309 304 17 28 chr10 141402746 141402845 -4186443 + (TATATG)n Simple_repeat Simple_repeat 2 100 -80 2326 122 119 8 chr10 141402845 141403230 -4186058 - MSTA LTR MaLR 0 428 1 309 304 17 28 chr10 141403230 141403311 -4185977 + (TATATG)n Simple_repeat Simple_repeat 100 180 0 264 314 10 49 chr10 141405418 141405520 -4183768 + MIR SINE MIR 73 170 -92 479 17 17 0 chr10 141405837 141405897 -4183391 + (TCTA)n Simple_repeat Simple_repeat 3 63 0 211 238 16 0 chr10 141405934 141406064 -4183224 + CT-rich Low_complexity Low_complexity 1 132 0 180 260 0 20 chr10 141406104 141406154 -4183134 - MIR SINE MIR -56 152 104 242 143 312 0 chr10 141406230 141406307 -4182981 + Charlie7 DNA MER1_type 1 101 -2511 828 36 79 0 chr10 141406382 141406547 -4182741 + (TCTA)n Simple_repeat Simple_repeat 3 180 0 962 6 78 0 chr10 141406559 141406726 -4182562 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 2175 125 36 31 chr10 141408045 141408405 -4180883 + THE1B LTR MaLR 1 362 -2 285 111 0 0 chr10 141408627 141408690 -4180598 - Alu SINE Alu 0 308 246 1018 83 0 21 chr10 141408691 141408836 -4180452 - AluY SINE Alu -169 142 1 33 0 0 0 chr10 141409222 141409255 -4180033 + AT_rich Low_complexity Low_complexity 1 33 0 2523 212 47 51 chr10 141413268 141413952 -4175336 - L1MA10 LINE L1 -1 6333 5653 184 300 156 0 chr10 141414068 141414158 -4175130 - L2 LINE L2 -31 3241 3138 1180 160 43 17 chr10 141415755 141416151 -4173137 + MER31A LTR ERV1 1 485 0 240 203 0 72 chr10 141419071 141419140 -4170148 - L1MC4 LINE L1 -1339 6703 6640 1494 165 89 186 chr10 141419141 141419704 -4169584 - MLT2B3 LTR ERVL -46 508 1 213 366 14 21 chr10 141421144 141421286 -4168002 - MIR SINE MIR -41 221 81 187 292 31 15 chr10 141421373 141421438 -4167850 - MIR3 SINE MIR -29 179 114 461 216 0 6 chr10 141423135 141423185 -4166103 + CT-rich Low_complexity Low_complexity 1 50 -130 1751 137 25 0 chr10 141423185 141423463 -4165825 - AluSx SINE Alu -27 285 1 461 216 0 6 chr10 141423463 141423593 -4165695 + CT-rich Low_complexity Low_complexity 50 180 0 321 47 0 0 chr10 141423596 141423639 -4165649 + (CA)n Simple_repeat Simple_repeat 1 43 0 1774 166 17 0 chr10 141423979 141424281 -4165007 + AluSx SINE Alu 1 307 -5 1710 134 46 36 chr10 141424816 141425123 -4164165 + AluJo SINE Alu 1 310 -2 199 85 43 43 chr10 141425136 141425183 -4164105 + A-rich Low_complexity Low_complexity 2 48 0 243 296 0 0 chr10 141426117 141426286 -4163002 + (CA)n Simple_repeat Simple_repeat 2 170 0 335 275 0 11 chr10 141426320 141426502 -4162786 + (CA)n Simple_repeat Simple_repeat 1 180 0 278 310 0 0 chr10 141426532 141426758 -4162530 + (CA)n Simple_repeat Simple_repeat 1 226 0 209 360 48 32 chr10 141426868 141426993 -4162295 - MIR SINE MIR -58 150 24 189 312 48 65 chr10 141427780 141427966 -4161322 - MIR SINE MIR -45 217 35 1673 155 24 14 chr10 141428375 141428671 -4160617 + AluJb SINE Alu 1 299 -13 387 0 0 0 chr10 141428675 141428718 -4160570 + (TA)n Simple_repeat Simple_repeat 2 44 0 279 0 0 0 chr10 141428717 141428748 -4160540 + (CA)n Simple_repeat Simple_repeat 2 32 0 * 2348 192 63 50 chr10 141428762 141429346 -4159942 - L1MD2 LINE L1 -23 6336 5745 189 0 0 0 chr10 141431039 141431060 -4158228 + (CCCCCG)n Simple_repeat Simple_repeat 2 22 0 251 312 73 28 chr10 141433512 141433621 -4155667 + MIR SINE MIR 61 174 -88 330 262 169 17 chr10 141433984 141434221 -4155067 + L1ME LINE L1 5545 5817 -304 1342 211 66 79 chr10 141434590 141435060 -4154228 + MLT1C LTR MaLR 1 464 -3 1574 151 43 83 chr10 141435304 141435628 -4153660 - AluJb SINE Alu -1 311 1 3292 200 72 24 chr10 141435775 141436626 -4152662 - L1MC3 LINE L1 -15 7770 6879 186 286 0 0 chr10 141437035 141437084 -4152204 - MIR3 SINE MIR -40 168 120 874 232 80 57 chr10 141437363 141437699 -4151589 - MER2 DNA MER2_type 0 344 1 24 0 0 0 chr10 141437918 141437942 -4151346 + AT_rich Low_complexity Low_complexity 1 24 0 193 406 47 0 chr10 141437977 141438083 -4151205 - L2 LINE L2 -3 3310 3200 856 101 0 0 chr10 141438090 141438199 -4151089 + AluY SINE Alu 187 295 -16 1540 194 7 26 chr10 141438561 141438870 -4150418 - AluJo SINE Alu -9 303 1 408 385 174 11 chr10 141438884 141439240 -4150048 - L1MC4a LINE L1 -1874 5934 5521 24 0 0 0 chr10 141442394 141442418 -4146870 + AT_rich Low_complexity Low_complexity 1 24 0 227 335 0 32 chr10 141444948 141445103 -4144185 + (CATATA)n Simple_repeat Simple_repeat 6 155 0 195 42 0 0 chr10 141446779 141446803 -4142485 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 329 261 37 87 chr10 141446906 141447067 -4142221 - MIR SINE MIR -89 173 21 2188 122 54 25 chr10 141447262 141447616 -4141672 - THE1B LTR MaLR 0 364 1 22 0 0 0 chr10 141447955 141447977 -4141311 + AT_rich Low_complexity Low_complexity 1 22 0 206 261 22 0 chr10 141450933 141450979 -4138309 + L2 LINE L2 3226 3272 0 198 245 57 19 chr10 141450986 141451039 -4138249 + MIR3 SINE MIR 122 176 -32 210 308 135 38 chr10 141455102 141455235 -4134053 + MIR SINE MIR 47 192 -70 201 154 0 0 chr10 141457211 141457250 -4132038 + T-rich Low_complexity Low_complexity 1 39 0 2358 103 0 13 chr10 141458344 141458655 -4130633 + AluSc SINE Alu 1 307 -2 1277 70 14 0 chr10 141458658 141458872 -4130416 + (GAAA)n Simple_repeat Simple_repeat 1 217 0 183 301 14 55 chr10 141458956 141459029 -4130259 - MER5B DNA MER1_type -97 81 12 249 264 33 44 chr10 141465170 141465260 -4124028 - MIR SINE MIR -62 146 102 2568 139 52 2 chr10 141466647 141467051 -4122237 + MSTB LTR MaLR 1 424 -2 248 318 39 31 chr10 141467539 141467668 -4121620 - MIR SINE MIR -113 149 20 207 332 123 37 chr10 141468618 141468681 -4120607 - MIR SINE MIR -35 227 171 2125 146 3 3 chr10 141468681 141468990 -4120298 - AluSc SINE Alu 0 309 1 207 332 123 37 chr10 141468990 141469113 -4120175 - MIR SINE MIR -91 171 25 383 242 72 13 chr10 141469864 141470017 -4119271 + MER103 DNA DNA 2 163 -3 2183 167 52 18 chr10 141470041 141470424 -4118864 - MSTD LTR MaLR 0 396 1 650 248 163 7 chr10 141470683 141470990 -4118298 + L1MC4 LINE L1 7688 8042 0 2084 151 0 3 chr10 141471136 141471448 -4117840 + AluSq SINE Alu 1 311 -2 515 238 36 21 chr10 141471740 141471904 -4117384 + L1MA9 LINE L1 6132 6291 0 1314 175 18 108 chr10 141472177 141472285 -4117003 + L1MA9 LINE L1 5918 6034 -278 2041 131 6 16 chr10 141472285 141472597 -4116691 + AluSc SINE Alu 1 309 0 1314 175 18 108 chr10 141472597 141472922 -4116366 + L1MA9 LINE L1 6034 6312 0 27 49 0 0 chr10 141472934 141472975 -4116313 + AT_rich Low_complexity Low_complexity 1 41 0 511 247 12 12 chr10 141476720 141476967 -4112321 + GA-rich Low_complexity Low_complexity 1 247 0 * 865 134 0 37 chr10 141476961 141477148 -4112140 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 205 271 21 143 chr10 141477447 141477587 -4111701 - MIR3 SINE MIR -17 191 69 236 244 0 0 chr10 141477786 141477831 -4111457 + MIR SINE MIR 108 152 -56 226 319 123 7 chr10 141478335 141478473 -4110815 - MIR SINE MIR -84 178 25 1920 140 63 33 chr10 141481784 141482148 -4107140 + THE1C LTR MaLR 1 375 0 306 256 98 15 chr10 141482773 141482906 -4106382 - L2 LINE L2 -3 3310 3167 189 74 0 0 chr10 141482919 141482946 -4106342 + (CAA)n Simple_repeat Simple_repeat 2 28 0 1671 166 40 4 chr10 141483159 141483437 -4105851 + AluJb SINE Alu 1 288 -24 237 283 71 0 chr10 141483647 141483746 -4105542 + L2 LINE L2 3145 3250 -22 596 185 23 31 chr10 141484795 141484925 -4104363 + FLAM_C SINE Alu 1 129 -4 28 29 0 0 chr10 141485928 141485963 -4103325 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr10 141486233 141486255 -4103033 + AT_rich Low_complexity Low_complexity 1 22 0 2257 99 0 0 chr10 141487573 141487885 -4101403 + AluY SINE Alu 1 312 0 322 268 120 43 chr10 141488625 141488834 -4100454 + HAL1 LINE L1 968 1192 -1315 917 277 150 50 chr10 141488847 141489093 -4100195 + HAL1 LINE L1 1230 1450 -1057 5808 108 9 6 chr10 141489093 141490748 -4098540 - L1PA15 LINE L1 -7 6158 4471 917 277 150 50 chr10 141490748 141490808 -4098480 + HAL1 LINE L1 1450 1503 -1004 1823 171 16 3 chr10 141490808 141491112 -4098176 - AluSx SINE Alu -4 308 1 917 277 150 50 chr10 141491112 141491451 -4097837 + HAL1 LINE L1 1503 1941 -566 250 305 51 41 chr10 141491928 141492125 -4097163 + HAL1 LINE L1 2226 2424 -83 203 175 0 0 chr10 141492288 141492328 -4096960 + T-rich Low_complexity Low_complexity 1 40 0 7644 32 2 10 chr10 141492350 141494029 -4095259 - L1PA4 LINE L1 -3 6152 4480 271 274 75 41 chr10 141494416 141494562 -4094726 - MLT1J2 LTR MaLR -287 163 13 204 40 0 0 chr10 141496216 141496241 -4093047 + (CA)n Simple_repeat Simple_repeat 2 26 0 7122 56 10 0 chr10 141496872 141498002 -4091286 + L1PA6 LINE L1 5082 6220 0 210 339 154 0 chr10 141498033 141498163 -4091125 + MIR SINE MIR 52 201 -61 223 205 17 25 chr10 141498268 141498517 -4090771 + (TG)n Simple_repeat Simple_repeat 1 246 0 256 258 11 11 chr10 141498529 141498622 -4090666 + (TG)n Simple_repeat Simple_repeat 2 94 0 440 198 12 12 chr10 141498635 141498802 -4090486 + (TG)n Simple_repeat Simple_repeat 2 168 0 360 0 0 0 chr10 141505928 141505968 -4083320 + (TG)n Simple_repeat Simple_repeat 2 41 0 225 191 0 0 chr10 141508511 141508558 -4080730 + A-rich Low_complexity Low_complexity 1 47 0 243 0 0 0 chr10 141509502 141509529 -4079759 + (TG)n Simple_repeat Simple_repeat 1 27 0 207 0 0 0 chr10 141509735 141509758 -4079530 + (T)n Simple_repeat Simple_repeat 1 23 0 297 75 0 0 chr10 141516689 141516729 -4072559 + (GA)n Simple_repeat Simple_repeat 2 41 0 22 56 0 0 chr10 141517223 141517259 -4072029 + AT_rich Low_complexity Low_complexity 1 36 0 31 26 0 0 chr10 141517440 141517478 -4071810 + AT_rich Low_complexity Low_complexity 1 38 0 240 238 0 0 chr10 141519057 141519120 -4070168 + (TATG)n Simple_repeat Simple_repeat 2 64 0 1971 97 0 26 chr10 141519647 141519915 -4069373 - AluSg SINE Alu -8 302 42 558 120 0 0 chr10 141519915 141519990 -4069298 - AluS SINE Alu -233 77 3 249 279 140 15 chr10 141520023 141520159 -4069129 + MIR SINE MIR 96 248 -14 206 262 187 0 chr10 141520213 141520320 -4068968 + MIR SINE MIR 118 244 -18 288 0 0 0 chr10 141522024 141522056 -4067232 + (A)n Simple_repeat Simple_repeat 1 32 0 219 298 7 43 chr10 141522346 141522487 -4066801 + L2 LINE L2 2673 2808 -506 208 280 45 30 chr10 141522618 141522750 -4066538 + L2 LINE L2 2950 3083 -189 228 241 120 65 chr10 141522825 141522933 -4066355 + L2 LINE L2 3123 3236 -36 189 177 16 32 chr10 141522941 141523003 -4066285 + A-rich Low_complexity Low_complexity 5 65 0 221 175 10 41 chr10 141524359 141524456 -4064832 + CT-rich Low_complexity Low_complexity 2 95 0 279 274 0 0 chr10 141524971 141525033 -4064255 + CT-rich Low_complexity Low_complexity 4 65 0 296 188 14 0 chr10 141525033 141525102 -4064186 + (CA)n Simple_repeat Simple_repeat 1 70 0 180 0 0 0 chr10 141525723 141525743 -4063545 + (A)n Simple_repeat Simple_repeat 1 20 0 28 0 0 0 chr10 141529356 141529384 -4059904 + AT_rich Low_complexity Low_complexity 1 28 0 378 0 0 0 chr10 141530337 141530379 -4058909 + (CA)n Simple_repeat Simple_repeat 2 43 0 1500 204 57 32 chr10 141531215 141531594 -4057694 - L1MC2 LINE L1 -9 6335 5949 600 269 87 0 chr10 141531605 141531824 -4057464 - MIR SINE MIR -20 242 5 395 317 25 45 chr10 141532035 141532278 -4057010 - MIR SINE MIR -17 245 8 194 174 22 22 chr10 141532337 141532383 -4056905 + MIR SINE MIR 81 126 -82 3276 97 11 0 chr10 141533762 141534207 -4055081 + L1PA11 LINE L1 5723 6172 -2 468 295 19 26 chr10 141534976 141535060 -4054228 + MIR SINE MIR 107 191 -71 682 206 37 37 chr10 141535060 141535174 -4054114 - MER53 DNA DNA 0 189 73 2388 66 0 7 chr10 141535174 141535476 -4053812 - AluY SINE Alu -11 300 1 682 206 37 37 chr10 141535476 141535550 -4053738 - MER53 DNA DNA -115 74 1 468 295 19 26 chr10 141535550 141535621 -4053667 + MIR SINE MIR 191 261 -1 1052 236 143 22 chr10 141536187 141536611 -4052677 - MLT1D LTR MaLR -1 504 10 237 218 51 51 chr10 141537588 141537666 -4051622 + L2 LINE L2 3141 3218 -54 203 249 48 115 chr10 141537772 141537937 -4051351 - L2 LINE L2 -55 3258 3105 203 344 22 39 chr10 141538936 141539116 -4050172 + (CATG)n Simple_repeat Simple_repeat 3 179 0 299 315 18 9 chr10 141539136 141539247 -4050041 + (TG)n Simple_repeat Simple_repeat 2 113 0 2187 102 0 10 chr10 141543310 141543623 -4045665 - AluSx SINE Alu -1 311 2 360 0 0 0 chr10 141543670 141543710 -4045578 + (CA)n Simple_repeat Simple_repeat 2 41 0 180 0 0 0 chr10 141544658 141544678 -4044610 + (T)n Simple_repeat Simple_repeat 1 20 0 355 268 62 0 chr10 141548033 141548145 -4041143 + L2 LINE L2 3191 3309 -4 434 188 15 0 chr10 141548218 141548306 -4040982 + MIR SINE MIR 104 191 -50 2823 53 0 0 chr10 141548549 141548889 -4040399 + L1PA3 LINE L1 5813 6152 -3 215 91 91 0 chr10 141548906 141548950 -4040338 + A-rich Low_complexity Low_complexity 2 49 0 22 0 0 0 chr10 141549617 141549639 -4039649 + AT_rich Low_complexity Low_complexity 1 22 0 1439 191 161 78 chr10 141550543 141551045 -4038243 - MLT1E1 LTR MaLR -5 649 106 21 0 0 0 chr10 141551590 141551611 -4037677 + AT_rich Low_complexity Low_complexity 1 21 0 1297 109 62 0 chr10 141552210 141552403 -4036885 - LTR12 LTR ERV1 -133 581 377 291 245 31 20 chr10 141552404 141552502 -4036786 - LTR30 LTR ERV1 -80 642 544 6569 140 34 38 chr10 141552502 141554113 -4035175 - pTR5 LTR ERV1 -413 2025 743 2511 89 49 3 chr10 141554246 141554594 -4034694 + THE1B LTR MaLR 1 364 0 726 190 25 0 chr10 141555501 141555622 -4033666 + FLAM_C SINE Alu 2 125 -18 1869 146 0 7 chr10 141555818 141556112 -4033176 + AluSx SINE Alu 1 292 -20 1052 114 0 0 chr10 141556112 141556284 -4033004 + AluSg/x SINE Alu 134 305 0 355 288 62 77 chr10 141556340 141556614 -4032674 + L1ME4a LINE L1 5108 5377 -769 2181 68 0 27 chr10 141556831 141557127 -4032161 - AluY SINE Alu -14 297 10 267 280 120 5 chr10 141557523 141557723 -4031565 + L1ME4a LINE L1 5880 6102 -19 839 269 29 22 chr10 141557796 141558071 -4031217 + MER115 DNA AcHobo 412 688 -5 441 257 0 0 chr10 141558637 141558816 -4030472 + (TG)n Simple_repeat Simple_repeat 2 180 0 581 208 6 0 chr10 141558830 141559008 -4030280 + (TG)n Simple_repeat Simple_repeat 2 180 0 649 182 12 0 chr10 141559072 141559403 -4029885 + (TG)n Simple_repeat Simple_repeat 1 335 0 301 216 208 16 chr10 141560089 141560214 -4029074 + Charlie4 DNA MER1_type 1784 1932 -29 249 329 52 13 chr10 141561324 141561479 -4027809 + L1ME3A LINE L1 892 1052 -5879 347 269 67 62 chr10 141562022 141562230 -4027058 + L1ME3A LINE L1 1280 1488 -4935 915 281 179 35 chr10 141562269 141562939 -4026349 + L1ME3A LINE L1 1723 2465 -4476 1907 278 33 30 chr10 141563174 141564167 -4025121 + L1ME3A LINE L1 2857 3852 -3089 3355 197 20 15 chr10 141564185 141564956 -4024332 - Charlie1a DNA MER1_type -9 1446 672 375 304 10 0 chr10 141564956 141565058 -4024230 - MER81 DNA DNA 0 114 12 2025 256 70 36 chr10 141565069 141565711 -4023577 - Charlie1a DNA MER1_type -784 671 8 2864 282 60 27 chr10 141565838 141567336 -4021952 + L1ME3A LINE L1 3913 5460 -1481 480 227 9 27 chr10 141567438 141567548 -4021740 + Tigger3(Golem) DNA MER2_type 1 108 -2921 3930 137 63 14 chr10 141567549 141568258 -4021030 + Tigger3(Golem) DNA MER2_type 2285 3028 -1 219 231 39 0 chr10 141568258 141568310 -4020978 + (TATG)n Simple_repeat Simple_repeat 1 54 0 1257 269 12 2 chr10 141568349 141568769 -4020519 + L1ME3A LINE L1 5677 6100 -841 4267 209 69 2 chr10 141568787 141569857 -4019431 + L1MD1 LINE L1 5103 6240 -2 2168 265 42 19 chr10 141569889 141570584 -4018704 + L1ME3A LINE L1 6112 6822 -143 196 321 0 0 chr10 141570836 141570892 -4018396 + L3b LINE CR1 1191 1246 -337 184 232 54 18 chr10 141573890 141573946 -4015342 + L3 LINE CR1 1308 1365 -212 2179 87 0 20 chr10 141574849 141575149 -4014139 + AluSc SINE Alu 1 294 -15 303 49 0 0 chr10 141577304 141577345 -4011943 + (CA)n Simple_repeat Simple_repeat 1 41 0 230 231 15 0 chr10 141579647 141579712 -4009576 + (TATATG)n Simple_repeat Simple_repeat 4 69 0 199 285 88 36 chr10 141580176 141580313 -4008975 + L2 LINE L2 2167 2310 -1004 180 284 34 23 chr10 141580473 141580561 -4008727 + L2 LINE L2 2297 2385 -929 393 226 43 0 chr10 141580588 141580681 -4008607 - MLT1E1 LTR MaLR -557 97 1 1149 181 47 23 chr10 141581358 141581573 -4007715 - MER58A DNA MER1_type 0 224 5 790 205 60 143 chr10 141581738 141582158 -4007130 + MLT1B LTR MaLR 6 390 0 393 252 241 53 chr10 141582609 141583045 -4006243 + MER113 DNA MER1_type? 3 520 -1 201 250 14 69 chr10 141583102 141583174 -4006114 + L2 LINE L2 3245 3312 -1 219 69 0 0 chr10 141583719 141583748 -4005540 + (TG)n Simple_repeat Simple_repeat 1 29 0 183 349 48 0 chr10 141584145 141584208 -4005080 + MIR SINE MIR 30 95 -113 775 291 76 41 chr10 141584569 141584988 -4004300 - L2 LINE L2 -15 3298 2865 1440 247 27 37 chr10 141585009 141585418 -4003870 + MLT2D LTR ERVL 4 408 -6 2026 110 35 0 chr10 141586827 141587117 -4002171 - AluSx SINE Alu -12 300 1 2101 113 3 0 chr10 141589120 141589421 -3999867 + AluSp SINE Alu 2 303 -10 213 108 0 0 chr10 141591717 141591754 -3997534 + (TC)n Simple_repeat Simple_repeat 2 38 0 1262 237 68 12 chr10 141591762 141592100 -3997188 - MLT2C1 LTR ERVL -40 357 1 2029 102 0 10 chr10 141593356 141593651 -3995637 + AluSq SINE Alu 6 297 -16 252 322 44 0 chr10 141596714 141596804 -3992484 + MIR SINE MIR 71 164 -98 298 339 93 0 chr10 141596984 141597102 -3992186 + L3 LINE CR1 119 247 -1330 309 296 82 0 chr10 141597465 141597563 -3991725 - MIR SINE MIR -98 164 59 1981 157 67 0 chr10 141597566 141597909 -3991379 + MER47A DNA MER2_type 1 366 0 277 245 118 47 chr10 141598156 141598280 -3991008 - MIR SINE MIR -62 146 35 772 330 181 35 chr10 141598364 141599198 -3990090 + L3 LINE CR1 469 1424 -153 1348 215 55 71 chr10 141600758 141600864 -3988424 + MLT1C LTR MaLR 38 144 -323 1515 183 0 14 chr10 141600864 141601153 -3988135 + AluJo SINE Alu 13 297 -15 1348 215 55 71 chr10 141601153 141601483 -3987805 + MLT1C LTR MaLR 144 467 0 2088 125 0 3 chr10 141601985 141602298 -3986990 + AluSx SINE Alu 1 312 0 236 316 38 0 chr10 141603040 141603119 -3986169 - L2 LINE L2 0 3313 3232 1324 219 245 5 chr10 141604520 141604936 -3984352 - MLT1E LTR MaLR -8 585 70 286 266 133 6 chr10 141605612 141605770 -3983518 + L1ME LINE L1 5 182 -5937 1181 296 101 66 chr10 141605936 141607159 -3982129 + L1ME LINE L1 561 3920 -2209 1522 281 82 22 chr10 141607297 141608068 -3981220 + L1ME LINE L1 4976 5781 -372 2192 115 0 0 chr10 141608099 141608403 -3980885 + AluSx SINE Alu 1 304 -8 969 280 89 44 chr10 141608465 141609005 -3980283 + L1ME3 LINE L1 5336 5899 -263 368 297 40 7 chr10 141609037 141609185 -3980103 - LTR16A1 LTR ERVL -300 157 5 3184 163 48 7 chr10 141609366 141609972 -3979316 - L1MB3 LINE L1 -2 6181 5551 393 289 59 37 chr10 141610683 141610818 -3978470 - MIR SINE MIR -19 243 106 990 283 45 43 chr10 141611193 141611660 -3977628 - HAL1 LINE L1 -794 1713 1246 1008 143 12 0 chr10 141612019 141612187 -3977101 + FRAM SINE Alu 1 168 -8 1551 225 117 11 chr10 141613923 141614377 -3974911 - MLT1D LTR MaLR -3 502 1 276 30 0 0 chr10 141616605 141616638 -3972650 + (GA)n Simple_repeat Simple_repeat 2 34 0 528 231 0 0 chr10 141621162 141621318 -3967970 + (TG)n Simple_repeat Simple_repeat 1 156 0 186 43 0 0 chr10 141621522 141621545 -3967743 + (CA)n Simple_repeat Simple_repeat 2 24 0 220 302 0 0 chr10 141625095 141625148 -3964140 + GA-rich Low_complexity Low_complexity 1 53 0 234 0 0 0 chr10 141625582 141625608 -3963680 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1624 148 16 26 chr10 141625617 141625927 -3963361 + AluJo SINE Alu 6 312 0 2085 114 0 0 chr10 141629194 141629483 -3959805 + AluSq SINE Alu 1 289 -24 186 43 0 0 chr10 141629493 141629516 -3959772 + (TAAA)n Simple_repeat Simple_repeat 4 26 0 2432 50 0 0 chr10 141630514 141630816 -3958472 - AluY SINE Alu -9 302 1 3141 142 37 28 chr10 141632502 141633071 -3956217 + MER4B LTR ERV1 1 574 -36 899 233 53 82 chr10 141633225 141633648 -3955640 + MLT1A2 LTR MaLR 1 396 0 443 219 8 98 chr10 141634645 141634768 -3954520 + MER81 DNA DNA 1 112 -2 248 323 101 32 chr10 141634781 141634939 -3954349 + MER5A DNA MER1_type 2 170 -19 250 262 106 51 chr10 141635442 141635602 -3953686 - MIR3 SINE MIR -65 143 15 522 280 71 24 chr10 141635757 141635968 -3953320 + MIR SINE MIR 40 260 -2 413 336 0 9 chr10 141636362 141636469 -3952819 - L2 LINE L2 -33 3239 3134 9822 161 45 10 chr10 141637451 141639117 -3950171 + ERVL-B1 LTR ERVL 4026 5750 -14 1942 218 28 71 chr10 141639125 141639624 -3949664 + MLT2B1 LTR ERVL 3 479 -41 261 0 0 0 chr10 141639624 141639653 -3949635 + (CA)n Simple_repeat Simple_repeat 2 30 0 1942 218 28 71 chr10 141639653 141639691 -3949597 + MLT2B1 LTR ERVL 479 517 -3 307 243 162 27 chr10 141639712 141639823 -3949465 + L2 LINE L2 3187 3312 -1 586 310 139 34 chr10 141641107 141641753 -3947535 + HAL1b LINE L1 66 779 -569 44 70 0 0 chr10 141641985 141642071 -3947217 + AT_rich Low_complexity Low_complexity 1 86 0 299 163 43 39 chr10 141642099 141642426 -3946862 + (TTATA)n Simple_repeat Simple_repeat 1 328 0 27 29 0 0 chr10 141642614 141642648 -3946640 + AT_rich Low_complexity Low_complexity 1 34 0 366 284 136 25 chr10 141642901 141643063 -3946225 - MIR SINE MIR -65 197 18 2239 123 0 3 chr10 141643588 141643898 -3945390 + AluSx SINE Alu 1 309 -3 522 180 0 0 chr10 141647821 141647921 -3941367 + GA-rich Low_complexity Low_complexity 2 101 0 191 224 0 41 chr10 141651242 141651291 -3937997 - L2 LINE L2 -19 3253 3207 461 304 107 0 chr10 141652025 141652278 -3937010 - L1ME4a LINE L1 -66 6055 5776 309 275 18 0 chr10 141652287 141652396 -3936892 - L1ME4a LINE L1 -383 5738 5628 27 29 0 0 chr10 141652493 141652527 -3936761 + AT_rich Low_complexity Low_complexity 1 34 0 324 229 98 23 chr10 141652550 141652700 -3936588 - L1ME4a LINE L1 -753 5431 5270 234 0 0 0 chr10 141652906 141652932 -3936356 + (CA)n Simple_repeat Simple_repeat 2 27 0 352 280 81 27 chr10 141652953 141653139 -3936149 - L1MC4a LINE L1 -1914 5894 5699 719 296 83 45 chr10 141653565 141654338 -3934950 - L1MC4a LINE L1 -1175 4971 4170 289 333 0 12 chr10 141654713 141654806 -3934482 + MIR SINE MIR 28 120 -88 397 310 107 61 chr10 141655322 141655848 -3933440 - L1MC4a LINE L1 -2921 3225 2676 24 32 0 0 chr10 141655862 141655893 -3933395 + AT_rich Low_complexity Low_complexity 1 31 0 232 259 17 0 chr10 141656523 141656581 -3932707 + CT-rich Low_complexity Low_complexity 1 59 0 186 196 93 113 chr10 141657477 141657488 -3931800 + L2 LINE L2 3219 3229 -84 1146 220 24 102 chr10 141657488 141657911 -3931377 - MLT1B LTR MaLR 0 390 1 186 196 93 113 chr10 141657911 141657996 -3931292 + L2 LINE L2 3229 3313 0 1993 180 85 21 chr10 141660454 141660888 -3928400 - MLT1C LTR MaLR 0 467 6 293 278 135 15 chr10 141662545 141662678 -3926610 - MER103 DNA DNA -12 154 6 182 360 41 20 chr10 141663008 141663155 -3926133 - L3 LINE CR1 -341 1236 1087 332 317 94 77 chr10 141663312 141664122 -3925166 + L2 LINE L2 2150 2973 -341 2748 45 0 0 chr10 141664290 141664601 -3924687 - AluY SINE Alu 0 311 1 1545 210 32 96 chr10 141664704 141665203 -3924085 - MLT1C LTR MaLR 0 467 1 428 238 95 27 chr10 141665856 141666003 -3923285 - MIR3 SINE MIR -41 167 11 188 327 95 24 chr10 141666099 141666267 -3923021 - MIR SINE MIR -28 234 55 318 286 42 60 chr10 141667750 141667918 -3921370 + MIR SINE MIR 65 229 -33 221 208 0 21 chr10 141668269 141668317 -3920971 + L2 LINE L2 3225 3271 -1 297 312 93 77 chr10 141668419 141668807 -3920481 - L2 LINE L2 -1 3271 2878 2688 119 8 6 chr10 141668985 141669345 -3919943 - THE1B LTR MaLR 0 364 4 297 321 87 79 chr10 141669375 141669882 -3919406 - L2 LINE L2 -820 2494 1984 3032 286 57 30 chr10 141669982 141670938 -3918350 + L1M4 LINE L1 2110 3123 -3023 1612 197 3 16 chr10 141670938 141671253 -3918035 + AluJo SINE Alu 2 312 0 3032 286 57 30 chr10 141671253 141671793 -3917495 + L1M4 LINE L1 3123 3647 -2499 316 233 45 23 chr10 141671850 141671983 -3917305 + (TATATG)n Simple_repeat Simple_repeat 3 138 0 369 174 11 33 chr10 141672210 141672302 -3916986 - L1MB8 LINE L1 0 6178 6089 297 0 0 0 chr10 141673359 141673392 -3915896 + (CCCCAG)n Simple_repeat Simple_repeat 2 34 0 258 294 22 0 chr10 141675725 141675817 -3913471 + MER94 DNA DNA 6 99 -35 300 120 0 0 chr10 141676137 141676187 -3913101 + (TC)n Simple_repeat Simple_repeat 2 51 0 1826 133 93 34 chr10 141676426 141676780 -3912508 - THE1C LTR MaLR 0 375 1 193 293 57 81 chr10 141676812 141676935 -3912353 - L2 LINE L2 0 3272 3153 752 309 86 8 chr10 141677346 141677731 -3911557 + L2 LINE L2 2269 2683 -631 205 256 39 13 chr10 141677754 141677832 -3911456 + L2 LINE L2 2793 2872 -442 323 293 0 0 chr10 141677912 141677994 -3911294 + L2 LINE L2 3225 3306 -7 306 0 0 0 chr10 141677997 141678031 -3911257 + (TGAA)n Simple_repeat Simple_repeat 1 34 0 331 319 101 0 chr10 141681938 141682076 -3907212 + MIR SINE MIR 48 199 -63 2218 156 48 29 chr10 141682081 141682613 -3906675 - MLT2A2 LTR ERVL 0 554 1 13889 124 9 20 chr10 141682614 141682812 -3906476 - Tigger1 DNA MER2_type 0 2418 2219 1671 185 3 30 chr10 141682812 141683115 -3906173 + AluJo SINE Alu 1 295 -17 13889 124 9 20 chr10 141683115 141685070 -3904218 - Tigger1 DNA MER2_type -199 2219 289 2006 101 79 39 chr10 141685082 141685438 -3903850 + THE1C LTR MaLR 6 375 0 1499 167 17 40 chr10 141685438 141685736 -3903552 - Tigger1 DNA MER2_type -2127 291 1 195 129 0 0 chr10 141685796 141685827 -3903461 + (CTA)n Simple_repeat Simple_repeat 3 33 0 384 315 47 53 chr10 141686364 141686704 -3902584 + L1ME3A LINE L1 5613 5950 -220 254 258 0 0 chr10 141687293 141687359 -3901929 + MLT1J2 LTR MaLR 372 437 -13 3279 219 65 22 chr10 141689998 141690816 -3898472 + L1MC4 LINE L1 6763 7615 -427 373 203 72 46 chr10 141690904 141691057 -3898231 + L1MC4 LINE L1 7756 7912 -130 183 225 0 45 chr10 141691057 141691168 -3898120 + (TATG)n Simple_repeat Simple_repeat 1 106 0 572 194 150 19 chr10 141691295 141691455 -3897833 - L1MC4 LINE L1 -814 7228 7048 1060 177 13 44 chr10 141691628 141691854 -3897434 + MER20 DNA MER1_type 1 219 0 263 195 232 0 chr10 141691988 141692070 -3897218 - AluJ/FLAM SINE Alu -200 102 2 2013 150 3 16 chr10 141694534 141694840 -3894448 + AluSx SINE Alu 1 302 -10 22 0 0 0 chr10 141695935 141695957 -3893331 + AT_rich Low_complexity Low_complexity 1 22 0 2092 122 7 0 chr10 141695960 141696254 -3893034 + AluSx SINE Alu 9 304 -8 384 313 100 29 chr10 141696663 141697043 -3892245 + L1ME LINE L1 5408 5814 -307 649 288 146 63 chr10 141697527 141698446 -3890842 + L1ME4a LINE L1 3791 4785 -1361 1604 61 0 19 chr10 141698720 141698934 -3890354 + L1PA7 LINE L1 5942 6151 -3 189 0 0 0 chr10 141699114 141699135 -3890153 + (CA)n Simple_repeat Simple_repeat 2 22 0 1261 288 48 34 chr10 141699314 141699961 -3889327 + L1ME4a LINE L1 5265 5920 -201 380 265 8 8 chr10 141700387 141700504 -3888784 - MIR SINE MIR -97 165 49 1225 234 112 17 chr10 141700581 141700876 -3888412 + MLT1I LTR MaLR 82 404 -5 186 360 63 0 chr10 141701090 141701201 -3888087 + MIR SINE MIR 109 226 -36 863 179 6 0 chr10 141705298 141705477 -3883811 + (TGAG)n Simple_repeat Simple_repeat 1 180 0 814 179 6 11 chr10 141705517 141705696 -3883592 + (TGAG)n Simple_repeat Simple_repeat 1 178 0 631 231 7 0 chr10 141705707 141705985 -3883303 + (TGGG)n Simple_repeat Simple_repeat 1 280 0 681 217 0 0 chr10 141706005 141706185 -3883103 + (TGGG)n Simple_repeat Simple_repeat 1 180 0 374 262 7 0 chr10 141706208 141706357 -3882931 + (TGGG)n Simple_repeat Simple_repeat 4 153 0 221 378 0 0 chr10 141708247 141708345 -3880943 + (TG)n Simple_repeat Simple_repeat 2 99 0 260 364 6 12 chr10 141708359 141708521 -3880767 + (TG)n Simple_repeat Simple_repeat 1 161 0 * 351 322 0 33 chr10 141708499 141708679 -3880609 + (TATG)n Simple_repeat Simple_repeat 1 174 0 * 405 361 6 0 chr10 141708578 141708747 -3880541 + (TG)n Simple_repeat Simple_repeat 2 171 0 331 375 11 0 chr10 141708771 141708947 -3880341 + (TG)n Simple_repeat Simple_repeat 2 179 0 208 363 12 23 chr10 141708884 141709055 -3880233 + (TATG)n Simple_repeat Simple_repeat 2 170 0 * 278 127 0 48 chr10 141709067 141709130 -3880158 + (TG)n Simple_repeat Simple_repeat 2 61 0 266 310 0 20 chr10 141709132 141709232 -3880056 + (CATG)n Simple_repeat Simple_repeat 2 99 0 219 114 0 0 chr10 141709244 141709279 -3880009 + (TG)n Simple_repeat Simple_repeat 1 35 0 663 293 172 26 chr10 141709895 141710319 -3878969 + MLT1K LTR MaLR 99 584 -4 248 291 0 12 chr10 141711736 141711822 -3877466 - L3b LINE CR1 -338 1245 1161 193 351 35 26 chr10 141716000 141716114 -3873174 + L3 LINE CR1 343 457 -1120 * 220 360 34 0 chr10 141716096 141716185 -3873103 + L3b LINE CR1 1369 1460 -123 212 0 36 0 chr10 141718875 141718903 -3870385 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 383 259 37 0 chr10 141719602 141719710 -3869578 + MER81 DNA DNA 1 112 -2 28 86 0 0 chr10 141720726 141720796 -3868492 + AT_rich Low_complexity Low_complexity 1 70 0 2139 99 38 7 chr10 141720834 141721127 -3868161 + AluSq SINE Alu 1 302 -11 1813 164 3 11 chr10 141722130 141722416 -3866872 - AluJo SINE Alu -26 286 3 375 238 0 0 chr10 141726753 141726837 -3862451 + MER89 LTR ERV1 4 87 -472 * 911 271 73 21 chr10 141726816 141727156 -3862132 + MER89 LTR ERV1 201 558 -1 2495 216 155 14 chr10 141727184 141728071 -3861217 + L1MD3 LINE L1 5186 5378 -768 26 0 0 0 chr10 141728517 141728543 -3860745 + AT_rich Low_complexity Low_complexity 1 26 0 644 237 5 52 chr10 141728674 141728868 -3860420 - MER5A DNA MER1_type -3 186 2 750 211 0 0 chr10 141730051 141730231 -3859057 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 271 259 38 61 chr10 141730270 141730401 -3858887 + MIR SINE MIR 56 183 -79 617 286 33 14 chr10 141730581 141730794 -3858494 - MIR SINE MIR -8 254 38 450 219 158 26 chr10 141730859 141731080 -3858208 - MLT1D LTR MaLR -176 329 89 325 269 52 22 chr10 141731103 141731237 -3858051 + MIR SINE MIR 100 237 -25 376 302 17 17 chr10 141731333 141731802 -3857486 + (TG)n Simple_repeat Simple_repeat 1 469 0 1433 217 101 46 chr10 141732337 141732751 -3856537 - MLT1D LTR MaLR -2 503 60 188 67 33 0 chr10 141732751 141732781 -3856507 + (TAATG)n Simple_repeat Simple_repeat 3 33 0 1433 217 101 46 chr10 141732781 141732823 -3856465 - MLT1D LTR MaLR -445 60 22 310 246 131 25 chr10 141733684 141733806 -3855482 + MIR SINE MIR 122 256 -6 2753 91 6 3 chr10 141734559 141734922 -3854366 - THE1B LTR MaLR 0 364 1 234 170 21 64 chr10 141735235 141735329 -3853959 + A-rich Low_complexity Low_complexity 3 92 0 244 249 116 50 chr10 141735559 141735740 -3853548 - L2 LINE L2 -43 3270 3078 22 35 0 0 chr10 141735878 141735907 -3853381 + AT_rich Low_complexity Low_complexity 1 29 0 428 295 98 25 chr10 141736218 141736696 -3852592 + HAL1b LINE L1 468 2372 -135 246 136 0 0 chr10 141736748 141736792 -3852496 + (TC)n Simple_repeat Simple_repeat 2 45 0 305 205 64 26 chr10 141737012 141737090 -3852198 + L1MC/D LINE L1 2205 2285 -3861 259 291 108 44 chr10 141737200 141737403 -3851885 + L2 LINE L2 3098 3313 0 301 283 82 99 chr10 141737439 141737743 -3851545 + L1MC/D LINE L1 3826 4124 -2022 381 338 81 0 chr10 141738025 141738223 -3851065 + L1M4 LINE L1 2923 3136 -3010 302 276 125 39 chr10 141738284 141738516 -3850772 + L1M4 LINE L1 4257 4508 -1638 1676 164 26 22 chr10 141739234 141739545 -3849743 + AluJo SINE Alu 1 312 0 301 288 18 27 chr10 141739891 141740002 -3849286 + L1MC/D LINE L1 5567 5676 -2132 192 40 0 0 chr10 141740015 141740040 -3849248 + (CA)n Simple_repeat Simple_repeat 1 25 0 331 348 116 0 chr10 141740069 141740276 -3849012 - MIR SINE MIR -24 238 8 318 301 13 7 chr10 141743769 141743922 -3845366 + L1M4 LINE L1 4507 4660 -1486 247 371 18 18 chr10 141744480 141744647 -3844641 - L2 LINE L2 -1971 1343 1177 296 47 0 23 chr10 141744986 141745029 -3844259 + (CA)n Simple_repeat Simple_repeat 2 43 0 1874 164 19 19 chr10 141745136 141745446 -3843842 + AluJb SINE Alu 1 310 -2 463 305 119 44 chr10 141746618 141746979 -3842309 + HAL1 LINE L1 942 1329 -1178 294 250 103 7 chr10 141747169 141747305 -3841983 + HAL1 LINE L1 1527 1675 -832 1558 151 41 48 chr10 141747317 141747676 -3841612 + AluJo SINE Alu 1 357 0 31 58 0 0 chr10 141747746 141747798 -3841490 + AT_rich Low_complexity Low_complexity 1 52 0 248 331 60 17 chr10 141748240 141748774 -3840514 + L1M4 LINE L1 2590 3146 -3000 406 289 39 39 chr10 141749052 141749308 -3839980 + L1ME3A LINE L1 5568 5823 -339 300 220 101 83 chr10 141749402 141749570 -3839718 + L1ME3A LINE L1 5965 6135 -35 387 297 86 64 chr10 141749598 141749958 -3839330 + L1M4 LINE L1 3115 3482 -2664 348 298 90 27 chr10 141750213 141750589 -3838699 - L1M4 LINE L1 -3143 3003 2604 488 311 60 63 chr10 141750630 141751093 -3838195 - L1M4 LINE L1 -3556 2590 2129 412 194 176 35 chr10 141751341 141751511 -3837777 + MER105 DNA DNA 9 202 -2 490 267 83 33 chr10 141752156 141752396 -3836892 - L1M4 LINE L1 -1585 4561 4310 21 36 0 0 chr10 141752526 141752554 -3836734 + AT_rich Low_complexity Low_complexity 1 28 0 2425 40 44 3 chr10 141753289 141753585 -3835703 + AluY SINE Alu 1 308 -3 194 265 72 48 chr10 141753860 141753943 -3835345 - L2 LINE L2 0 3313 3229 632 243 6 17 chr10 141753945 141754122 -3835166 + L1MB7 LINE L1 5996 6170 -14 2097 92 65 10 chr10 141756303 141756596 -3832692 + AluSx SINE Alu 4 312 0 411 287 9 0 chr10 141757895 141758010 -3831278 - MER94 DNA DNA -14 120 5 201 345 54 100 chr10 141758480 141758851 -3830437 - L2 LINE L2 0 3272 2919 2249 114 0 0 chr10 141761196 141761503 -3827785 - AluSx SINE Alu -1 311 5 225 360 7 50 chr10 141762750 141762889 -3826399 + L2 LINE L2 3138 3270 -2 308 317 37 12 chr10 141763969 141764133 -3825155 + L2 LINE L2 1290 1457 -1857 341 267 55 59 chr10 141764169 141764371 -3824917 + L1ME2 LINE L1 2198 2398 -3998 648 268 149 11 chr10 141764529 141764985 -3824303 + L1ME2 LINE L1 2415 2933 -3282 755 283 51 20 chr10 141764990 141765481 -3823807 + L1ME2 LINE L1 2969 3474 -2741 1496 290 34 16 chr10 141765529 141766212 -3823076 + L1ME2 LINE L1 3722 4416 -1799 2386 243 49 50 chr10 141766217 141767068 -3822220 + L1ME1 LINE L1 5311 6160 -6 1360 251 23 41 chr10 141767079 141767295 -3821993 + L1ME2 LINE L1 4388 4606 -1609 3393 145 8 4 chr10 141767295 141767820 -3821468 - MER1A DNA MER1_type 0 527 1 1360 251 23 41 chr10 141767820 141768169 -3821119 + L1ME2 LINE L1 4606 4943 -1272 1796 249 72 42 chr10 141768228 141769365 -3819923 + L1ME2 LINE L1 5029 6211 -22 335 338 22 7 chr10 141769408 141769547 -3819741 + L1MC5 LINE L1 7784 7924 -37 354 254 119 24 chr10 141769878 141770004 -3819284 + MIR SINE MIR 50 187 -75 262 259 17 17 chr10 141772424 141772540 -3816748 + (TA)n Simple_repeat Simple_repeat 1 116 0 290 342 40 13 chr10 141773059 141773208 -3816080 + L3 LINE CR1 1249 1401 -176 611 299 108 5 chr10 141773269 141773473 -3815815 - MIR SINE MIR -30 232 8 3088 136 18 18 chr10 141773814 141774366 -3814922 - L1MA8 LINE L1 -2 6289 5738 597 126 11 0 chr10 141774375 141774470 -3814818 - L1PA16 LINE L1 0 6166 6071 461 183 0 29 chr10 141774479 141774583 -3814705 + L1PA16 LINE L1 5963 6063 -103 4366 171 28 17 chr10 141774799 141775664 -3813624 + L1MA9 LINE L1 5439 6312 0 340 295 131 0 chr10 141775985 141776107 -3813181 - MIR SINE MIR -2 260 123 468 0 0 0 chr10 141776280 141776332 -3812956 + (GGAA)n Simple_repeat Simple_repeat 1 52 0 2159 117 27 0 chr10 141777749 141778049 -3811239 + AluSx SINE Alu 3 310 -2 1223 136 128 4 chr10 141779872 141780114 -3809174 - Tigger2a DNA MER2_type 0 444 173 845 150 6 60 chr10 141780223 141780390 -3808898 - Tigger2a DNA MER2_type -276 158 1 1730 283 45 31 chr10 141780757 141781872 -3807416 + L1MD3 LINE L1 2718 3847 -2299 401 289 26 13 chr10 141782076 141782228 -3807060 + L1MC4 LINE L1 6459 6612 -1430 610 224 0 0 chr10 141782291 141782434 -3806854 + L1MD3 LINE L1 4487 4629 -1517 * 651 236 201 0 chr10 141782432 141782661 -3806627 - L1M4 LINE L1 -1221 4925 4651 4759 230 57 41 chr10 141782697 141782857 -3806431 + L1MD3 LINE L1 5158 3766 -2380 1785 130 3 45 chr10 141782857 141783149 -3806139 - AluJb SINE Alu -6 306 27 4759 230 57 41 chr10 141783149 141784815 -3804473 + L1MD3 LINE L1 3765 5403 -743 1442 253 78 75 chr10 141784843 141785052 -3804236 + L1M4 LINE L1 4083 4290 -1856 234 172 207 0 chr10 141785052 141785110 -3804178 - MER116 DNA Mariner -7 73 4 1442 253 78 75 chr10 141785110 141785890 -3803398 + L1M4 LINE L1 4290 5133 -1013 210 150 30 60 chr10 141785910 141786010 -3803278 + (TA)n Simple_repeat Simple_repeat 1 97 0 2295 214 108 30 chr10 141786015 141786912 -3802376 + L1ME4a LINE L1 4326 5292 -854 309 318 81 62 chr10 141786944 141787265 -3802023 + HAL1b LINE L1 548 874 -474 631 315 62 0 chr10 141787289 141787549 -3801739 + L1ME4a LINE L1 5570 5845 -276 432 0 0 0 chr10 141788060 141788108 -3801180 + (CA)n Simple_repeat Simple_repeat 2 49 0 24 0 0 0 chr10 141790337 141790361 -3798927 + AT_rich Low_complexity Low_complexity 1 24 0 2096 147 98 17 chr10 141794709 141794730 -3794558 - Tigger2 DNA MER2_type 0 2718 2700 2202 135 114 5 chr10 141794730 141795116 -3794172 - MSTA LTR MaLR 0 428 1 2096 147 98 17 chr10 141795116 141795541 -3793747 - Tigger2 DNA MER2_type -18 2700 1 897 202 181 0 chr10 141796273 141796461 -3792827 + MER58A DNA MER1_type 3 224 0 202 375 54 11 chr10 141796820 141797004 -3792284 + L3 LINE CR1 437 628 -949 214 306 204 38 chr10 141797144 141797591 -3791697 + L3 LINE CR1 864 1384 -193 275 228 106 83 chr10 141798354 141798534 -3790754 - L1ME LINE L1 -526 5595 5412 296 298 63 38 chr10 141798543 141798701 -3790587 + MIR SINE MIR 17 178 -84 4613 227 62 41 chr10 141798701 141799069 -3790219 + L1ME1 LINE L1 3730 4089 -2077 1618 104 36 0 chr10 141799069 141799290 -3789998 - MER30 DNA MER1_type 0 230 2 4613 227 62 41 chr10 141799290 141800149 -3789139 + L1ME1 LINE L1 4089 4928 -1238 1730 65 0 0 chr10 141800149 141800369 -3788919 + AluY SINE Alu 84 303 0 4613 227 62 41 chr10 141800369 141801067 -3788221 + L1ME1 LINE L1 4928 5717 -449 2464 171 52 2 chr10 141801067 141801506 -3787782 - LOR1b LTR ERV1 0 461 1 4613 227 62 41 chr10 141801506 141801964 -3787324 + L1ME1 LINE L1 5717 6164 -2 227 306 0 0 chr10 141801964 141802026 -3787262 + MIR SINE MIR 201 262 0 1934 231 60 81 chr10 141802315 141803032 -3786256 - L1ME1 LINE L1 -5 6161 5460 1752 124 74 34 chr10 141807808 141808106 -3781182 - AluJo SINE Alu -1 311 2 407 236 121 14 chr10 141809648 141809788 -3779500 - MLT1L LTR MaLR -8 607 453 2205 103 7 0 chr10 141811856 141812148 -3777140 + AluSx SINE Alu 6 299 -13 218 196 0 22 chr10 141813643 141813689 -3775599 + GA-rich Low_complexity Low_complexity 3 47 0 21 0 0 0 chr10 141815125 141815146 -3774142 + AT_rich Low_complexity Low_complexity 1 21 0 2330 110 3 0 chr10 141817106 141817415 -3771873 - AluSg SINE Alu 0 310 1 315 311 57 0 chr10 141817782 141817904 -3771384 - MIR SINE MIR -62 200 72 728 205 49 27 chr10 141818069 141818254 -3771034 + MER53 DNA DNA 1 189 0 1859 154 33 4 chr10 141822765 141823115 -3766173 - MLT1B LTR MaLR -7 389 28 218 200 0 0 chr10 141823437 141823477 -3765811 - MIR SINE MIR -94 114 75 1232 135 67 0 chr10 141824250 141824458 -3764830 + AluJo SINE Alu 84 305 -7 1031 104 5 14 chr10 141824463 141824674 -3764614 + (GGAA)n Simple_repeat Simple_repeat 1 209 0 293 287 11 0 chr10 141825758 141825852 -3763436 + L1ME LINE L1 5719 5813 -308 823 91 0 58 chr10 141825977 141826098 -3763190 - AluSg/x SINE Alu -12 300 187 192 313 150 6 chr10 141828440 141828600 -3760688 + MIR SINE MIR 69 251 -11 822 218 74 39 chr10 141829034 141829263 -3760025 - MER8 DNA MER2_type -2 237 1 189 107 0 0 chr10 141829450 141829478 -3759810 + (GGAGA)n Simple_repeat Simple_repeat 3 30 0 2811 149 25 2 chr10 141832335 141832806 -3756482 - Tigger4(Zombi) DNA MER2_type -28 2703 2222 660 248 52 0 chr10 141832803 141832956 -3756332 - Tigger4(Zombi) DNA MER2_type -2570 161 1 * 1997 97 55 0 chr10 141833183 141833473 -3755815 - L1PB2 LINE L1 0 6151 5846 1035 210 227 22 chr10 141833492 141833906 -3755382 + MLT1D LTR MaLR 1 499 -6 2347 109 0 0 chr10 141834424 141834736 -3754552 + AluSx SINE Alu 1 312 0 195 301 176 20 chr10 141834775 141834928 -3754360 - MER5A DNA MER1_type 0 189 13 273 29 0 0 chr10 141835071 141835105 -3754183 + (CA)n Simple_repeat Simple_repeat 1 34 0 418 297 56 80 chr10 141836037 141836411 -3752877 + L1ME3 LINE L1 1272 1636 -4894 1887 171 0 7 chr10 141836506 141836816 -3752472 + AluSx SINE Alu 1 308 -4 561 272 37 33 chr10 141836843 141837086 -3752202 + HAL1 LINE L1 1425 1668 -839 21 0 0 0 chr10 141837471 141837492 -3751796 + AT_rich Low_complexity Low_complexity 1 21 0 308 296 7 56 chr10 141837529 141837671 -3751617 + L1ME3 LINE L1 2442 2576 -3964 2194 133 0 7 chr10 141837696 141837996 -3751292 - AluSx SINE Alu -14 298 1 322 306 54 24 chr10 141838015 141838312 -3750976 + L1ME3 LINE L1 2605 2910 -3630 1461 195 7 7 chr10 141838328 141838615 -3750673 + AluJo SINE Alu 2 288 -24 277 341 90 0 chr10 141838648 141838871 -3750417 + L1ME3 LINE L1 4347 4589 -1951 2031 158 145 20 chr10 141838953 141839402 -3749886 + MLT1D LTR MaLR 1 505 0 642 297 27 27 chr10 141839522 141839926 -3749362 + L1ME3 LINE L1 4836 5239 -1301 545 283 55 74 chr10 141840247 141841278 -3748010 + L1ME3 LINE L1 5266 6278 -278 982 176 30 0 chr10 141841302 141841467 -3747821 + FAM SINE Alu 4 173 -2 428 225 49 21 chr10 141843919 141844061 -3745227 - MER53 DNA DNA -5 184 39 1222 241 59 12 chr10 141844768 141845088 -3744200 + MER58B DNA MER1_type 2 336 -5 570 308 148 23 chr10 141845450 141846009 -3743279 + L2 LINE L2 1573 2201 -1113 717 128 0 85 chr10 141846049 141846190 -3743098 + FLAM_C SINE Alu 1 129 -4 21 0 0 0 chr10 141846190 141846211 -3743077 + AT_rich Low_complexity Low_complexity 1 21 0 511 339 18 27 chr10 141846622 141846846 -3742442 + MIR SINE MIR 34 255 -7 31 26 0 0 chr10 141848429 141848467 -3740821 + AT_rich Low_complexity Low_complexity 1 38 0 217 162 29 29 chr10 141851137 141851205 -3738083 + (CATG)n Simple_repeat Simple_repeat 1 68 0 288 311 0 0 chr10 141851209 141851290 -3737998 + (CA)n Simple_repeat Simple_repeat 1 81 0 895 291 55 39 chr10 141852302 141852889 -3736399 + L1ME4a LINE L1 5267 5862 -259 22 88 0 0 chr10 141853079 141853136 -3736152 + AT_rich Low_complexity Low_complexity 1 57 0 198 330 88 0 chr10 141855060 141855151 -3734137 + MIR SINE MIR 56 154 -108 1986 235 76 4 chr10 141855162 141855686 -3733602 + L1MC2 LINE L1 5768 6329 -15 292 204 148 68 chr10 141857682 141857844 -3731444 - MER53 DNA DNA -5 184 10 396 129 57 0 chr10 141858300 141858370 -3730918 - MER46C DNA MER2_type -8 330 257 334 303 26 19 chr10 141858579 141858734 -3730554 - MER46C DNA MER2_type -144 194 39 953 217 0 37 chr10 141859600 141859817 -3729471 - MER3 DNA MER1_type 0 209 1 334 330 154 31 chr10 141860083 141860934 -3728354 + L2 LINE L2 1849 2804 -510 910 233 14 9 chr10 141860957 141861180 -3728108 - MER58A DNA MER1_type 0 224 1 267 103 0 0 chr10 141861472 141861511 -3727777 + (CA)n Simple_repeat Simple_repeat 1 39 0 1582 157 28 47 chr10 141861933 141862251 -3727037 - AluJb SINE Alu 0 312 1 1406 206 0 90 chr10 141862802 141863201 -3726087 + MLT1A1 LTR MaLR 1 363 -2 23 0 0 0 chr10 141863230 141863253 -3726035 + AT_rich Low_complexity Low_complexity 1 23 0 194 274 0 68 chr10 141863365 141863438 -3725850 + MER5B DNA MER1_type 110 177 -1 265 271 37 19 chr10 141863445 141863552 -3725736 + L1ME4a LINE L1 5794 5902 -219 1933 151 120 56 chr10 141863681 141864131 -3725157 - Charlie1b DNA MER1_type -44 479 1 575 113 0 0 chr10 141865044 141865124 -3724164 - MADE1 DNA Mariner 0 80 1 1616 237 52 13 chr10 141865254 141865701 -3723587 - MLT1C LTR MaLR 0 467 4 258 339 35 28 chr10 141865753 141866007 -3723281 - L2 LINE L2 -1351 1963 1708 36 0 0 0 chr10 141866144 141866180 -3723108 + AT_rich Low_complexity Low_complexity 1 36 0 279 230 22 112 chr10 141866229 141866313 -3722975 - L1ME4a LINE L1 -107 6014 5953 1876 133 0 3 chr10 141866313 141866598 -3722690 + AluSx SINE Alu 1 284 -28 279 230 22 112 chr10 141866598 141866691 -3722597 - L1ME4a LINE L1 -168 5953 5853 361 213 12 0 chr10 141866783 141866863 -3722425 - L1ME4a LINE L1 -303 5818 5738 348 203 25 38 chr10 141866934 141867013 -3722275 - L1MCa LINE L1 -4354 2072 1995 1190 174 219 0 chr10 141867737 141867984 -3721304 + AluJb SINE Alu 1 301 -1 1344 28 23 0 chr10 141868014 141868058 -3721230 + (GAAA)n Simple_repeat Simple_repeat 1 224 0 1344 28 23 0 chr10 141868058 141868234 -3721054 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 463 233 7 7 chr10 141868517 141868663 -3720625 + GA-rich Low_complexity Low_complexity 4 149 0 305 301 168 32 chr10 141868705 141869051 -3720237 + L1MC4a LINE L1 5450 5842 -1966 344 220 55 18 chr10 141869989 141870098 -3719190 + L1MC4a LINE L1 5814 5926 -1882 353 254 36 43 chr10 141870515 141870653 -3718635 - L1ME4a LINE L1 -32 6089 5953 2046 108 3 7 chr10 141873157 141873452 -3715836 + AluSx SINE Alu 1 294 -18 624 205 0 36 chr10 141876543 141876709 -3712579 + L1MA4 LINE L1 6138 6297 -3 207 217 14 58 chr10 141879372 141879441 -3709847 + CT-rich Low_complexity Low_complexity 3 68 0 190 331 102 8 chr10 141880197 141880324 -3708964 + L2 LINE L2 3175 3313 0 503 207 116 9 chr10 141880404 141880564 -3708724 - L1MA9 LINE L1 -4 6308 6106 219 188 0 0 chr10 141880697 141880745 -3708543 + (CA)n Simple_repeat Simple_repeat 2 49 0 236 285 31 62 chr10 141882672 141882802 -3706486 - MIR3 SINE MIR -14 194 69 378 232 78 103 chr10 141883164 141883324 -3705964 - MIR SINE MIR -12 250 95 1972 151 0 0 chr10 141883324 141883636 -3705652 + AluSx SINE Alu 1 312 0 378 232 78 103 chr10 141883636 141883710 -3705578 - MIR SINE MIR -167 95 21 182 256 110 12 chr10 141884268 141884350 -3704938 - L3b LINE CR1 -299 1284 1195 239 236 112 34 chr10 141885762 141885851 -3703437 - L2 LINE L2 -153 3119 3024 469 245 61 85 chr10 141886302 141886514 -3702774 - MLT1J LTR MaLR -194 317 111 232 242 45 15 chr10 141886459 141886525 -3702763 - LTR67 LTR ERVL -385 172 105 * 1259 112 11 0 chr10 141886650 141886838 -3702450 + L1PB2 LINE L1 5960 6149 -2 2102 118 0 9 chr10 141887311 141887626 -3701662 - AluSx SINE Alu 0 312 1 481 258 120 43 chr10 141887959 141888168 -3701120 + MIR SINE MIR 38 262 0 2479 87 26 11 chr10 141888947 141889294 -3699994 + L1PB1 LINE L1 5799 6150 -1 393 300 93 67 chr10 141889717 141890127 -3699161 + L1M4 LINE L1 4565 4995 -1151 489 300 103 15 chr10 141890222 141890676 -3698612 + L1ME LINE L1 5261 5754 -410 315 278 85 40 chr10 141891157 141891333 -3697955 + L1M4 LINE L1 5121 5304 -842 28 48 0 0 chr10 141892894 141892936 -3696352 + AT_rich Low_complexity Low_complexity 1 42 0 325 291 97 23 chr10 141893631 141893806 -3695482 + MIR SINE MIR 54 241 -21 190 188 39 162 chr10 141894296 141894450 -3694838 - L2 LINE L2 -416 2898 2764 333 68 0 0 chr10 141896277 141896321 -3692967 + (TGAA)n Simple_repeat Simple_repeat 2 45 0 22 0 0 0 chr10 141899165 141899187 -3690101 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr10 141900729 141900751 -3688537 + AT_rich Low_complexity Low_complexity 1 22 0 649 215 54 108 chr10 141902534 141902797 -3686491 - MER96B DNA MER1_type? -118 299 53 2163 99 0 0 chr10 141902797 141903122 -3686166 + AluSx SINE Alu 1 325 0 649 215 54 108 chr10 141903122 141903173 -3686115 - MER96B DNA MER1_type? -364 53 1 453 230 166 30 chr10 141905448 141905683 -3683605 + MLT1K LTR MaLR 322 588 0 22 35 0 0 chr10 141906081 141906110 -3683178 + AT_rich Low_complexity Low_complexity 1 29 0 221 345 43 14 chr10 141906364 141906474 -3682814 - L2 LINE L2 -70 3243 3127 2106 106 3 3 chr10 141906474 141906775 -3682513 + AluSx SINE Alu 1 301 -11 221 345 43 14 chr10 141906775 141906803 -3682485 - L2 LINE L2 -186 3127 3101 410 281 92 11 chr10 141907094 141907238 -3682050 + MIR SINE MIR 43 191 -67 1872 125 39 0 chr10 141908522 141908801 -3680487 + AluSx SINE Alu 1 290 -22 24 32 0 0 chr10 141910226 141910257 -3679031 + AT_rich Low_complexity Low_complexity 1 31 0 3296 273 79 59 chr10 141910269 141912241 -3677047 + HAL1 LINE L1 1 2168 -339 685 252 229 0 chr10 141912768 141912978 -3676310 + MIR SINE MIR 5 262 0 531 269 69 6 chr10 141913093 141913253 -3676035 - MLT1J LTR MaLR -340 171 2 215 308 31 0 chr10 141915438 141915503 -3673785 - L2 LINE L2 -214 3058 2992 3302 96 16 0 chr10 141917854 141918293 -3670995 - MLT2A2 LTR ERVL -7 446 1 659 286 79 83 chr10 141918496 141918978 -3670310 + MLT1L LTR MaLR 118 597 -18 341 328 64 8 chr10 141918986 141919111 -3670177 - MER5A DNA MER1_type -23 166 35 226 231 39 51 chr10 141919885 141919963 -3669325 + MER5A DNA MER1_type 61 137 -52 212 95 24 48 chr10 141919935 141919977 -3669311 - MER5A DNA MER1_type -99 90 50 * 256 355 78 37 chr10 141920052 141920269 -3669019 + MIR SINE MIR 37 262 0 240 200 60 10 chr10 141921800 141921900 -3667388 + (ATTG)n Simple_repeat Simple_repeat 2 106 0 250 348 43 11 chr10 141922786 141922878 -3666410 + L2 LINE L2 3147 3241 -31 1926 194 27 67 chr10 141924360 141924840 -3664448 + MLT1C LTR MaLR 6 466 -1 260 310 140 0 chr10 141925352 141925523 -3663765 - MLT1L LTR MaLR 0 615 421 213 39 0 0 chr10 141928424 141928450 -3660838 + (TAAAAA)n Simple_repeat Simple_repeat 2 27 0 249 139 0 0 chr10 141928505 141928548 -3660740 + (GA)n Simple_repeat Simple_repeat 2 44 0 721 161 181 0 chr10 141928860 141929015 -3660273 - MER53 DNA DNA 0 189 7 590 315 92 47 chr10 141929502 141929924 -3659364 - L2 LINE L2 -1 3312 2872 1144 101 0 45 chr10 141930196 141930375 -3658913 + AluSg/x SINE Alu 132 302 -8 1662 202 64 5 chr10 141930424 141930815 -3658473 - Zaphod DNA AcHobo -23 4008 3595 360 148 108 151 chr10 141930819 141930863 -3658425 - Zaphod DNA AcHobo -3078 953 909 1390 163 10 50 chr10 141930863 141931163 -3658125 + AluJo SINE Alu 1 288 -24 360 148 108 151 chr10 141931163 141931396 -3657892 - Zaphod DNA AcHobo -3122 909 688 857 144 8 0 chr10 141931450 141931582 -3657706 + FLAM_C SINE Alu 1 133 -10 312 200 71 0 chr10 141931594 141931664 -3657624 + AluJ/FRAM SINE Alu 227 301 -1 610 185 11 17 chr10 141931664 141931842 -3657446 + GA-rich Low_complexity Low_complexity 2 178 0 1411 259 94 41 chr10 141931861 141932424 -3656864 - Zaphod DNA AcHobo -3373 658 66 896 257 29 23 chr10 141932503 141932810 -3656478 - L2 LINE L2 -881 2433 2125 3727 166 19 34 chr10 141932832 141932980 -3656308 + L1MB3 LINE L1 5452 5601 -582 2096 114 0 7 chr10 141932980 141933278 -3656010 + AluSx SINE Alu 1 296 -16 3727 166 19 34 chr10 141933278 141933865 -3655423 + L1MB3 LINE L1 5601 6176 -7 1955 204 78 39 chr10 141934810 141935272 -3654016 + MLT2B1 LTR ERVL 1 480 -40 3211 175 47 2 chr10 141935275 141935851 -3653437 + MER7C DNA MER2_type 1 602 0 302 0 26 0 chr10 141935852 141935890 -3653398 + (CA)n Simple_repeat Simple_repeat 2 40 0 29 0 0 0 chr10 141936781 141936810 -3652478 + AT_rich Low_complexity Low_complexity 1 29 0 207 0 0 0 chr10 141937415 141937438 -3651850 + (A)n Simple_repeat Simple_repeat 1 23 0 404 320 42 31 chr10 141937728 141937930 -3651358 - MIR SINE MIR -18 244 42 206 161 25 49 chr10 141941081 141941162 -3648126 + CT-rich Low_complexity Low_complexity 6 84 0 527 224 34 84 chr10 141941237 141941352 -3647936 + MIR SINE MIR 63 167 -95 1769 154 3 20 chr10 141941352 141941670 -3647618 - AluSx SINE Alu 0 312 1 527 224 34 84 chr10 141941670 141941733 -3647555 + MIR SINE MIR 167 232 -30 539 215 45 68 chr10 141941742 141941919 -3647369 - MLT1K LTR MaLR 0 588 416 632 254 61 0 chr10 141942205 141942370 -3646918 + MIR SINE MIR 63 237 -25 752 182 250 0 chr10 141942407 141942599 -3646689 - Tigger3(Golem) DNA MER2_type -18 3011 2772 * 890 182 0 7 chr10 141942596 141942739 -3646549 - Tigger3(Golem) DNA MER2_type -2887 142 1 227 265 60 80 chr10 141943321 141943472 -3645816 + MLT1K LTR MaLR 138 285 -303 2214 112 0 6 chr10 141944989 141945303 -3643985 + AluSx SINE Alu 1 312 0 227 269 28 102 chr10 141947661 141947769 -3641519 - MIR SINE MIR -68 140 49 463 258 0 8 chr10 141947769 141947889 -3641399 + MER117 DNA MER1_type 8 126 -71 1157 223 181 22 chr10 141948338 141948741 -3640547 - MLT1C LTR MaLR 0 467 1 380 224 32 45 chr10 141949326 141949482 -3639806 + C-rich Low_complexity Low_complexity 2 155 0 2026 124 7 3 chr10 141950874 141951173 -3638115 + AluSx SINE Alu 1 300 -12 1722 153 0 17 chr10 141951982 141952283 -3637005 - AluJo SINE Alu -16 296 1 208 283 20 50 chr10 141953899 141953998 -3635290 + MER5A DNA MER1_type 23 118 -71 281 328 42 17 chr10 141954816 141954935 -3634353 + MIR SINE MIR 9 130 -132 395 354 34 25 chr10 141955630 141955867 -3633421 - MIR SINE MIR -22 240 2 257 227 30 0 chr10 141958236 141958302 -3630986 + MER81 DNA DNA 41 108 -6 1163 216 31 77 chr10 141959671 141960059 -3629229 + MLT1A2 LTR MaLR 1 370 -4 2955 218 93 0 chr10 141962110 141962866 -3626422 - Charlie1 DNA MER1_type -4 2757 1932 849 129 0 0 chr10 141962867 141962991 -3626297 + FLAM_C SINE Alu 1 124 -19 692 264 125 10 chr10 141963004 141963300 -3625988 - Charlie1 DNA MER1_type -822 1939 1610 226 303 0 0 chr10 141963362 141963428 -3625860 - Charlie1 DNA MER1_type -1247 1514 1449 4782 259 68 33 chr10 141963498 141966050 -3623238 - L1MEc LINE L1 -2259 3956 1304 1612 147 125 3 chr10 141966050 141966131 -3623157 - MER46B DNA MER2_type -2497 234 164 321 109 0 0 chr10 141966131 141966186 -3623102 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 1612 147 125 3 chr10 141966186 141966423 -3622865 - MER46B DNA MER2_type -2567 164 2 4782 259 68 33 chr10 141966423 141967140 -3622148 - L1MEc LINE L1 -4911 1304 613 350 185 19 19 chr10 141967165 141967273 -3622015 + (TATG)n Simple_repeat Simple_repeat 2 109 0 728 307 58 34 chr10 141967290 141967761 -3621527 - L1MEc LINE L1 -5797 599 114 1000 159 97 58 chr10 141967761 141967987 -3621301 + MER46A DNA MER2_type 2 236 0 728 307 58 34 chr10 141967987 141968013 -3621275 - L1MEc LINE L1 -6282 114 90 1985 134 0 31 chr10 141968439 141968760 -3620528 - AluSx SINE Alu -1 311 1 592 195 24 12 chr10 141969885 141970049 -3619239 - L1M4 LINE L1 -797 5349 5184 216 0 0 0 chr10 141970184 141970208 -3619080 + (TG)n Simple_repeat Simple_repeat 2 25 0 447 186 0 0 chr10 141970216 141970313 -3618975 + (CA)n Simple_repeat Simple_repeat 2 98 0 1203 271 75 88 chr10 141970486 141971350 -3617938 - L1ME LINE L1 -643 5801 4969 2174 117 0 3 chr10 141971350 141971658 -3617630 + AluSg SINE Alu 1 307 -3 1203 271 75 88 chr10 141971658 141972333 -3616955 - L1ME LINE L1 -1475 4969 4287 471 316 9 10 chr10 141972468 141972680 -3616608 - L1ME LINE L1 -2163 4263 4053 597 233 150 36 chr10 141972839 141973285 -3616003 - L1ME LINE L1 -3992 2615 2119 937 301 70 28 chr10 141973509 141974353 -3614935 - L1ME LINE L1 -4800 1807 900 355 288 61 98 chr10 141975197 141975523 -3613765 - L1MEd LINE L1 -5238 881 568 229 155 35 52 chr10 141976735 141976793 -3612495 + MIR SINE MIR 97 153 -55 1094 169 19 19 chr10 141976794 141977001 -3612287 + MER3 DNA MER1_type 1 207 -2 28 61 0 0 chr10 141979094 141979143 -3610145 + AT_rich Low_complexity Low_complexity 1 49 0 752 167 0 0 chr10 141979143 141979263 -3610025 - FLAM_C SINE Alu -22 121 2 425 273 100 20 chr10 141979746 141979896 -3609392 - L1MD3 LINE L1 -11 7984 7823 3353 227 46 54 chr10 141979897 141979924 -3609364 - L1MC4a LINE L1 -252 7556 7530 1835 196 20 0 chr10 141979924 141980281 -3609007 + MLT1A1 LTR MaLR 1 364 -1 3353 227 46 54 chr10 141980281 141981369 -3607919 - L1MC4a LINE L1 -278 7530 6450 459 333 20 20 chr10 141982620 141982818 -3606470 + MIR SINE MIR 1 198 -64 1500 173 42 3 chr10 141982839 141983122 -3606166 - AluJb SINE Alu -18 294 1 194 186 23 23 chr10 141983234 141983277 -3606011 - L3 LINE CR1 0 1577 1535 427 239 134 0 chr10 141984513 141984647 -3604641 + MIR SINE MIR 80 231 -31 1392 265 156 12 chr10 141986256 141986909 -3602379 - MER20B DNA MER1_type -3 780 34 290 218 13 26 chr10 141987937 141988015 -3601273 - MER20B DNA MER1_type -350 433 357 957 191 59 20 chr10 141988315 141988519 -3600769 + MER20 DNA MER1_type 1 212 -7 302 350 35 14 chr10 141989184 141989327 -3599961 + MIR SINE MIR 2 147 -115 2409 86 3 6 chr10 141990804 141991118 -3598170 - AluSq SINE Alu 0 313 1 3141 197 50 3 chr10 141995019 141995679 -3593609 + L1MB4 LINE L1 5489 6179 -1 1447 191 123 0 chr10 141996840 141997165 -3592123 + MLT1A1 LTR MaLR 1 365 0 180 0 0 0 chr10 141998199 141998219 -3591069 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 402 21 0 0 chr10 142000599 142000646 -3588642 + (CA)n Simple_repeat Simple_repeat 2 48 0 517 189 9 9 chr10 142000647 142000753 -3588535 + Tigger2a DNA MER2_type 4 109 -325 1837 158 90 11 chr10 142000876 142001243 -3588045 + Tigger2 DNA MER2_type 2323 2708 -10 606 183 99 15 chr10 142002251 142002382 -3586906 + FLAM_C SINE Alu 1 142 -1 290 328 86 0 chr10 142002545 142002673 -3586615 - MER58B DNA MER1_type -8 333 195 181 275 0 0 chr10 142003570 142003610 -3585678 + MIR3 SINE MIR 119 158 -50 180 0 0 0 chr10 142006616 142006636 -3582652 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 2662 46 3 0 chr10 142006934 142007241 -3582047 - AluY SINE Alu -3 308 1 562 221 8 0 chr10 142008882 142009009 -3580279 - FLAM_A SINE Alu -5 128 1 294 247 13 39 chr10 142010473 142010550 -3578738 - L2 LINE L2 -5 3308 3234 275 195 73 49 chr10 142011085 142011167 -3578121 - MLT1J LTR MaLR -193 318 235 311 259 220 21 chr10 142011247 142011583 -3577705 - L2 LINE L2 -87 3226 2824 1797 117 71 3 chr10 142011621 142011903 -3577385 - MER1B DNA MER1_type -4 335 35 340 252 10 48 chr10 142012171 142012237 -3577051 - L1MEc LINE L1 -4574 1822 1760 2091 129 3 19 chr10 142012237 142012554 -3576734 - AluJb SINE Alu 0 312 1 340 252 10 48 chr10 142012554 142012590 -3576698 - L1MEc LINE L1 -4636 1760 1724 300 185 56 0 chr10 142012671 142012725 -3576563 - L1MC3 LINE L1 0 7785 7729 209 306 81 36 chr10 142012944 142013055 -3576233 + L2 LINE L2 2642 2757 -557 444 261 133 67 chr10 142015384 142015805 -3573483 + LTR67 LTR ERVL 109 557 0 911 253 9 13 chr10 142017314 142017539 -3571749 - MER58A DNA MER1_type 0 224 1 857 166 0 0 chr10 142017729 142017868 -3571420 + FRAM SINE Alu 26 164 -12 1081 194 28 0 chr10 142017925 142018105 -3571183 - AluJo SINE Alu -125 187 3 506 166 124 48 chr10 142020600 142020745 -3568543 - L1ME2 LINE L1 -1 6163 6008 1956 255 101 45 chr10 142020755 142021088 -3568200 - L1ME2 LINE L1 -482 5682 5369 2458 90 0 0 chr10 142021088 142021388 -3567900 - AluSg SINE Alu -10 300 1 1956 255 101 45 chr10 142021388 142021955 -3567333 - L1ME2 LINE L1 -795 5369 4835 2394 64 0 0 chr10 142021955 142022260 -3567028 - AluY SINE Alu 0 305 1 1956 255 101 45 chr10 142022260 142023283 -3566005 - L1ME2 LINE L1 -1329 4835 3496 225 290 14 0 chr10 142032626 142032695 -3556593 - L1MB3 LINE L1 -49 6134 6065 507 155 18 137 chr10 142032842 142032894 -3556394 - L1MB2 LINE L1 -86 6097 6040 2293 111 3 0 chr10 142032894 142033200 -3556088 - AluSx SINE Alu -5 307 1 507 155 18 137 chr10 142033200 142033315 -3555973 - L1MB2 LINE L1 -143 6040 5950 428 230 406 0 chr10 142036704 142036891 -3552397 - L1ME4a LINE L1 -44 6077 5815 536 280 48 16 chr10 142037337 142037526 -3551762 + MIR SINE MIR 56 250 -12 196 302 139 0 chr10 142037783 142037869 -3551419 + L2 LINE L2 3197 3294 -19 1995 131 16 29 chr10 142037883 142038196 -3551092 + AluJo SINE Alu 1 309 -3 1228 223 14 11 chr10 142038673 142038960 -3550328 + MLT1B LTR MaLR 22 309 -81 396 0 0 0 chr10 142043409 142043453 -3545835 + (TG)n Simple_repeat Simple_repeat 2 45 0 191 289 127 56 chr10 142045166 142045308 -3543980 + MIR SINE MIR 63 214 -48 1507 227 52 3 chr10 142045326 142045674 -3543614 + MER47A DNA MER2_type 1 365 -1 24 0 0 0 chr10 142045997 142046021 -3543267 + AT_rich Low_complexity Low_complexity 1 24 0 328 318 18 0 chr10 142046575 142046685 -3542603 + C-rich Low_complexity Low_complexity 3 114 0 776 193 6 12 chr10 142046685 142047174 -3542114 + CT-rich Low_complexity Low_complexity 1 486 0 203 288 82 53 chr10 142051502 142051672 -3537616 + MIR SINE MIR 10 184 -78 389 277 155 13 chr10 142055508 142055663 -3533625 - L1M4 LINE L1 -743 5441 5265 786 126 93 20 chr10 142055733 142055884 -3533404 - L1MD3 LINE L1 0 7995 7834 241 267 114 38 chr10 142057045 142057150 -3532138 + MIR3 SINE MIR 45 157 -51 24418 27 6 0 chr10 142057515 142061150 -3528138 + L1PA4 LINE L1 2515 6155 0 627 286 38 9 chr10 142062729 142062942 -3526346 - MIR SINE MIR -24 238 20 255 301 19 58 chr10 142066713 142066869 -3522419 + Charlie8 DNA MER1_type 3 152 -2265 2605 208 61 61 chr10 142066910 142067649 -3521639 - L1MB8 LINE L1 -7 6171 5433 402 250 0 0 chr10 142067825 142067905 -3521383 - MER44D DNA MER2_type 0 705 626 * 1063 206 91 67 chr10 142067901 142068231 -3521057 + MER2 DNA MER2_type 8 345 0 2336 173 54 22 chr10 142068236 142068682 -3520606 - MER44D DNA MER2_type -90 515 1 1459 220 48 116 chr10 142068722 142069326 -3519962 - L1ME1 LINE L1 -99 6067 5505 374 270 99 11 chr10 142069340 142069940 -3519348 - L1MDa LINE L1 -4511 1704 1004 1221 113 4 2 chr10 142069942 142070189 -3519099 - AluSc SINE Alu -9 300 2 1186 226 44 11 chr10 142070191 142070553 -3518735 - L1MDa LINE L1 -5416 980 607 918 232 27 50 chr10 142070559 142070867 -3518421 + MLT1E1 LTR MaLR 325 653 -1 3071 239 122 31 chr10 142074042 142074104 -3515184 + Charlie1 DNA MER1_type 1528 1583 -1178 2270 91 0 3 chr10 142074104 142074413 -3514875 + AluSg SINE Alu 1 308 -2 3071 239 122 31 chr10 142074413 142075446 -3513842 + Charlie1 DNA MER1_type 1583 2723 -38 2442 205 110 25 chr10 142076093 142076737 -3512551 - LTR34 LTR ERV1 0 699 1 495 296 92 5 chr10 142080089 142080285 -3509003 + MER58C DNA MER1_type 3 215 0 274 305 49 0 chr10 142080529 142080611 -3508677 - L2 LINE L2 -22 3291 3206 452 261 91 30 chr10 142080699 142080898 -3508390 + MIR SINE MIR 21 231 -31 1825 149 158 3 chr10 142081468 142081817 -3507471 - MER57A LTR ERV1 0 403 1 330 26 0 0 chr10 142082421 142082460 -3506828 + (TAGG)n Simple_repeat Simple_repeat 1 39 0 21 36 0 0 chr10 142091021 142091049 -3498239 + AT_rich Low_complexity Low_complexity 1 28 0 664 262 145 20 chr10 142092731 142093043 -3496245 + L2 LINE L2 2777 3172 -141 617 236 131 10 chr10 142093043 142093242 -3496046 + MER58A DNA MER1_type 1 223 -1 664 262 145 20 chr10 142093242 142093404 -3495884 + L2 LINE L2 3172 3312 -1 428 285 125 50 chr10 142093565 142093615 -3495673 - LTR16A LTR ERVL -18 432 387 1946 166 122 10 chr10 142093615 142094000 -3495288 - MSTA LTR MaLR 0 428 1 428 285 125 50 chr10 142094000 142094230 -3495058 - LTR16A LTR ERVL -63 387 131 2935 121 26 17 chr10 142094335 142094926 -3494362 - MER4E LTR ERV1 0 766 1 1534 182 101 0 chr10 142096387 142096733 -3492555 - L1MB3 LINE L1 0 6183 5803 5203 109 0 22 chr10 142099415 142100317 -3488971 - L1PA15 LINE L1 0 6165 5227 3283 250 141 51 chr10 142100762 142103429 -3485859 - L1MDa LINE L1 -1278 4937 2029 844 250 5 5 chr10 142103430 142103634 -3485654 + MER3 DNA MER1_type 1 204 -5 530 279 34 61 chr10 142103634 142103896 -3485392 - L1MDa LINE L1 -4327 2069 1815 244 263 35 70 chr10 142103963 142104134 -3485154 - L2 LINE L2 -624 2690 2526 192 77 0 0 chr10 142105983 142106009 -3483279 + (TA)n Simple_repeat Simple_repeat 1 26 0 1402 182 85 4 chr10 142106018 142106276 -3483012 - AluJo SINE Alu -33 279 1 1632 253 122 37 chr10 142107334 142108148 -3481140 + L1ME LINE L1 3105 3987 -2159 216 158 0 0 chr10 142108182 142108220 -3481068 + (TG)n Simple_repeat Simple_repeat 2 39 0 1809 167 0 13 chr10 142114001 142114306 -3474982 + AluJo SINE Alu 6 306 -6 830 137 0 8 chr10 142114360 142114491 -3474797 - FLAM_C SINE Alu -2 131 2 250 306 41 0 chr10 142114615 142114713 -3474575 - L1MB3 LINE L1 -294 5827 5726 268 233 41 14 chr10 142115008 142115081 -3474207 - L2 LINE L2 -1 3312 3238 351 306 139 31 chr10 142115423 142115747 -3473541 + L1ME LINE L1 5416 5774 -347 279 282 60 0 chr10 142116026 142116143 -3473145 - HAL1b LINE L1 -1 1347 1224 518 200 200 0 chr10 142116270 142116400 -3472888 - MER58B DNA MER1_type -11 330 175 659 275 38 19 chr10 142116402 142116664 -3472624 - L1MDa LINE L1 -4614 1782 1516 460 258 0 8 chr10 142117236 142117356 -3471932 - MER117 DNA MER1_type -71 126 8 208 330 57 0 chr10 142117356 142117444 -3471844 + MIR SINE MIR 49 141 -67 2290 119 0 6 chr10 142119821 142120133 -3469155 - AluSx SINE Alu -2 310 1 180 313 50 10 chr10 142120134 142120233 -3469055 + L2 LINE L2 3130 3232 -81 22 35 0 0 chr10 142120497 142120526 -3468762 + AT_rich Low_complexity Low_complexity 1 29 0 342 276 151 79 chr10 142120924 142121356 -3467932 - MLT1K LTR MaLR 0 588 126 24 0 0 0 chr10 142172229 142172253 -3417035 + AT_rich Low_complexity Low_complexity 1 24 0 1494 230 52 3 chr10 142172576 142172924 -3416364 - MER47A DNA MER2_type -1 365 1 351 65 0 0 chr10 142174958 142175004 -3414284 + (CA)n Simple_repeat Simple_repeat 2 47 0 1246 223 14 11 chr10 142179453 142179740 -3409548 - MLT1B LTR MaLR -81 309 22 1836 131 16 29 chr10 142180217 142180530 -3408758 - AluJo SINE Alu -3 309 1 216 289 118 68 chr10 142180544 142180807 -3408481 - L2 LINE L2 -19 3253 2978 574 254 58 26 chr10 142180887 142181076 -3408212 - MIR SINE MIR -12 250 56 330 26 0 0 chr10 142186518 142186557 -3402731 + (CCTA)n Simple_repeat Simple_repeat 1 39 0 1825 149 158 3 chr10 142187161 142187510 -3401778 + MER57A LTR ERV1 1 403 0 448 273 86 29 chr10 142188068 142188277 -3401011 - MIR SINE MIR -21 241 21 274 305 49 0 chr10 142188365 142188447 -3400841 + L2 LINE L2 3206 3291 -22 495 296 92 5 chr10 142188691 142188887 -3400401 - MER58C DNA MER1_type 0 215 3 2442 205 110 25 chr10 142192239 142192883 -3396405 + LTR34 LTR ERV1 1 699 0 3077 240 121 31 chr10 142193530 142194564 -3394724 - Charlie1 DNA MER1_type -38 2723 1583 2270 91 0 3 chr10 142194564 142194873 -3394415 - AluSg SINE Alu -2 308 1 3077 240 121 31 chr10 142194873 142194935 -3394353 - Charlie1 DNA MER1_type -1178 1583 1528 918 232 27 50 chr10 142198110 142198418 -3390870 - MLT1E1 LTR MaLR -1 653 325 1203 224 44 11 chr10 142198424 142198786 -3390502 + L1MEc LINE L1 607 980 -5416 1221 113 4 2 chr10 142198788 142199035 -3390253 + AluSc SINE Alu 2 300 -9 632 270 99 11 chr10 142199037 142199637 -3389651 + L1MEc LINE L1 1004 1704 -4511 1459 220 48 116 chr10 142199651 142200255 -3389033 + L1ME1 LINE L1 5505 6067 -99 2336 173 54 22 chr10 142200295 142200741 -3388547 + MER44D DNA MER2_type 1 515 -90 1063 206 91 67 chr10 142200746 142201076 -3388212 - MER2 DNA MER2_type 0 345 8 402 250 0 0 chr10 142201072 142201152 -3388136 + MER44D DNA MER2_type 626 705 0 * 2622 207 61 61 chr10 142201328 142202067 -3387221 + L1MB8 LINE L1 5433 6171 -7 255 301 19 58 chr10 142202109 142202265 -3387023 - Charlie8 DNA MER1_type -2265 152 3 627 286 38 9 chr10 142206036 142206249 -3383039 + MIR SINE MIR 20 238 -24 24417 27 2 0 chr10 142207828 142211464 -3377824 - L1PA4 LINE L1 0 6155 2515 241 267 114 38 chr10 142211829 142211934 -3377354 - MIR3 SINE MIR -51 157 45 786 126 93 20 chr10 142213095 142213246 -3376042 + L1MD3 LINE L1 7834 7995 0 400 271 155 13 chr10 142213316 142213471 -3375817 + L1M4 LINE L1 5265 5441 -743 186 43 0 0 chr10 142217222 142217245 -3372043 + (CCCCCA)n Simple_repeat Simple_repeat 5 27 0 203 288 82 53 chr10 142217307 142217477 -3371811 - MIR SINE MIR -78 184 10 21 36 0 0 chr10 142225580 142225608 -3363680 + AT_rich Low_complexity Low_complexity 1 28 0 834 262 145 20 chr10 142227290 142227602 -3361686 + L2 LINE L2 2777 3172 -141 612 236 131 10 chr10 142227602 142227801 -3361487 + MER58A DNA MER1_type 1 223 -1 834 262 145 20 chr10 142227801 142227963 -3361325 + L2 LINE L2 3172 3312 -1 441 283 43 61 chr10 142228124 142228174 -3361114 - LTR16A LTR ERVL -18 432 383 1952 166 122 10 chr10 142228174 142228559 -3360729 - MSTA LTR MaLR 0 428 1 441 283 43 61 chr10 142228559 142228738 -3360550 - LTR16A LTR ERVL -67 383 207 2927 120 26 17 chr10 142228894 142229485 -3359803 - MER4E LTR ERV1 0 766 1 1531 182 101 3 chr10 142230946 142231293 -3357995 - L1MB3 LINE L1 0 6577 6197 5185 107 0 22 chr10 142233975 142234877 -3354411 - L1PA15 LINE L1 0 6165 5227 2877 245 143 68 chr10 142235322 142238027 -3351261 - L1MB3 LINE L1 -1278 5262 2354 850 250 5 5 chr10 142238028 142238232 -3351056 + MER3 DNA MER1_type 1 204 -5 530 279 34 61 chr10 142238232 142238494 -3350794 - L1MEc LINE L1 -4327 2069 1815 283 277 36 66 chr10 142238566 142238732 -3350556 - L2 LINE L2 -628 2686 2526 192 77 0 0 chr10 142240581 142240607 -3348681 + (TA)n Simple_repeat Simple_repeat 1 26 0 1259 181 85 8 chr10 142240616 142240875 -3348413 - AluJo SINE Alu -33 279 1 410 350 16 21 chr10 142241548 142241742 -3347546 + L1ME LINE L1 2031 2223 -4173 348 350 84 80 chr10 142241933 142242812 -3346476 + L1ME LINE L1 3174 4056 -2159 198 167 0 0 chr10 142242846 142242882 -3346406 + (TG)n Simple_repeat Simple_repeat 2 37 0 1792 167 0 13 chr10 142248654 142248959 -3340329 + AluJo SINE Alu 6 306 -6 830 137 0 8 chr10 142249013 142249144 -3340144 - FLAM_C SINE Alu -2 131 2 260 296 41 0 chr10 142249268 142249366 -3339922 - L1ME LINE L1 -294 5827 5726 268 233 41 14 chr10 142249662 142249735 -3339553 - L2 LINE L2 -1 3312 3238 340 306 139 31 chr10 142250077 142250401 -3338887 + L1ME LINE L1 5485 5843 -347 279 282 60 0 chr10 142250680 142250797 -3338491 - HAL1b LINE L1 -1 1347 1224 518 200 200 0 chr10 142250924 142251054 -3338234 - MER58B DNA MER1_type -11 330 175 3665 264 98 21 chr10 142251054 142251611 -3337677 - L1MEc LINE L1 -4612 1784 1271 204 40 0 0 chr10 142251611 142251636 -3337652 + (TTCC)n Simple_repeat Simple_repeat 3 27 0 3665 264 98 21 chr10 142251636 142252701 -3336587 - L1MEc LINE L1 -5125 1271 37 209 314 105 0 chr10 142253399 142253485 -3335803 + MIR SINE MIR 162 256 -6 596 196 51 10 chr10 142253623 142253792 -3335496 - L1M4 LINE L1 -1975 4171 3999 322 235 12 0 chr10 142254606 142254687 -3334601 + MER96 DNA MER1_type? 2 83 -92 * 2061 179 8 36 chr10 142254685 142255076 -3334212 + MLT1B LTR MaLR 11 390 0 255 61 0 0 chr10 142255538 142255571 -3333717 + (A)n Simple_repeat Simple_repeat 1 33 0 561 285 102 0 chr10 142255598 142255833 -3333455 + HAL1 LINE L1 1403 1661 -846 382 330 57 0 chr10 142255841 142256105 -3333183 + L1M4 LINE L1 2134 2412 -3734 3795 244 143 19 chr10 142256322 142257206 -3332082 + L1M4 LINE L1 2317 3089 -3057 2103 134 0 0 chr10 142257206 142257504 -3331784 - AluSg SINE Alu -12 298 1 3795 244 143 19 chr10 142257504 142258563 -3330725 + L1M4 LINE L1 3089 4660 -1486 279 250 33 0 chr10 142259756 142259816 -3329472 - MER20B DNA MER1_type -668 115 54 913 189 0 12 chr10 142259894 142260063 -3329225 + AluJb SINE Alu 137 303 -9 192 359 63 28 chr10 142261974 142262116 -3327172 + L2 LINE L2 3126 3272 0 2255 119 0 7 chr10 142262227 142262530 -3326758 - AluSx SINE Alu -11 301 1 324 0 0 0 chr10 142263828 142263864 -3325424 + (TA)n Simple_repeat Simple_repeat 2 37 0 206 231 0 0 chr10 142265756 142265795 -3323493 + T-rich Low_complexity Low_complexity 4 42 0 1822 128 20 25 chr10 142273565 142273910 -3315378 - MER4A LTR ERV1 0 664 263 476 140 54 21 chr10 142273910 142274003 -3315285 - MER4A LTR ERV1 -566 98 3 268 266 35 79 chr10 142274461 142274690 -3314598 - L2 LINE L2 -1 3312 3094 465 19 0 0 chr10 142274786 142274840 -3314448 + (CA)n Simple_repeat Simple_repeat 2 55 0 465 19 0 0 chr10 142275377 142275431 -3313857 + (CA)n Simple_repeat Simple_repeat 2 55 0 2273 104 0 7 chr10 142276777 142277076 -3312212 + AluSx SINE Alu 1 297 -15 194 303 15 15 chr10 142278078 142278144 -3311144 - L2 LINE L2 -56 3216 3151 288 77 0 0 chr10 142278478 142278517 -3310771 + (CA)n Simple_repeat Simple_repeat 2 40 0 582 267 75 39 chr10 142278854 142279135 -3310153 - L1ME LINE L1 -330 5791 5501 614 205 0 26 chr10 142280020 142280137 -3309151 + MER81 DNA DNA 1 114 0 381 314 116 31 chr10 142280441 142281870 -3307418 + L1ME1 LINE L1 2297 3845 -2301 1256 282 101 19 chr10 142281875 142282399 -3306889 + L1MC4a LINE L1 6231 6797 -1011 1145 253 63 16 chr10 142282427 142282822 -3306466 + L1ME1 LINE L1 5263 5676 -490 228 250 16 0 chr10 142282822 142282886 -3306402 + (CTCA)n Simple_repeat Simple_repeat 4 68 0 202 106 21 43 chr10 142283014 142283061 -3306227 + (TC)n Simple_repeat Simple_repeat 2 47 0 997 272 67 37 chr10 142283071 142283505 -3305783 + L1ME1 LINE L1 5700 6146 -20 * 1114 229 115 45 chr10 142283503 142283948 -3305340 + L1MC4 LINE L1 7560 8035 -7 446 273 91 61 chr10 142283956 142284517 -3304771 - L1ME LINE L1 -1457 4689 4112 248 233 52 69 chr10 142284877 142284993 -3304295 - L1ME3A LINE L1 -94 6059 5946 1231 250 91 68 chr10 142285074 142285938 -3303350 - L1ME3A LINE L1 -222 5931 5011 530 169 264 79 chr10 142285938 142286116 -3303172 - MER58C DNA MER1_type -4 211 1 1231 250 91 68 chr10 142286116 142286796 -3302492 - L1ME3A LINE L1 -1142 5011 4348 737 222 0 0 chr10 142286942 142287068 -3302220 - FLAM_A SINE Alu -4 129 4 232 277 0 8 chr10 142287081 142287200 -3302088 - L1ME3A LINE L1 -2884 3245 3128 3614 205 82 26 chr10 142287205 142288116 -3301172 - Cheshire DNA MER1_type -381 2039 1078 613 258 90 17 chr10 142288195 142288540 -3300748 + L1M4 LINE L1 3072 3441 -2705 312 245 59 20 chr10 142288544 142288646 -3300642 + L1ME1 LINE L1 6053 6158 -8 2723 227 139 7 chr10 142288798 142289130 -3300158 - MER63C DNA MER1_type -139 921 634 766 210 61 33 chr10 142289130 142289344 -3299944 + MER58A DNA MER1_type 1 220 -4 2723 227 139 7 chr10 142289344 142289825 -3299463 - MER63C DNA MER1_type -426 634 1 291 312 76 36 chr10 142290034 142290508 -3298780 - L1MEd LINE L1 -4862 1257 812 230 289 41 120 chr10 142292361 142292603 -3296685 - L2 LINE L2 -58 3214 2992 26 74 0 0 chr10 142294801 142294855 -3294433 + AT_rich Low_complexity Low_complexity 1 54 0 2230 123 0 3 chr10 142296331 142296631 -3292657 + AluSx SINE Alu 1 299 -13 1609 245 105 51 chr10 142299062 142299130 -3290158 + L1MD2 LINE L1 5160 5223 -1136 1262 231 8 0 chr10 142299130 142299364 -3289924 - MER8 DNA MER2_type -3 236 1 1609 245 105 51 chr10 142299364 142300373 -3288915 + L1MD2 LINE L1 5223 6357 -2 2300 111 0 0 chr10 142300394 142300691 -3288597 - AluSx SINE Alu -15 297 1 185 275 100 38 chr10 142303108 142303188 -3286100 + L2 LINE L2 3188 3272 0 1979 125 43 10 chr10 142303902 142304205 -3285083 - AluSq SINE Alu 0 313 1 350 281 40 52 chr10 142304647 142304829 -3284459 - L1M4 LINE L1 -1063 5083 4903 2546 149 15 2 chr10 142304830 142305239 -3284049 - MER61E LTR ERV1 0 569 156 7297 49 0 4 chr10 142305240 142306238 -3283050 - L1PA5 LINE L1 -1 6153 5150 581 39 0 0 chr10 142306239 142306317 -3282971 + L1PA5 LINE L1 5086 5163 -983 1596 147 118 14 chr10 142306491 142306770 -3282518 - AluJb SINE Alu -4 308 1 397 319 65 18 chr10 142309449 142309618 -3279670 + MIR SINE MIR 67 243 -19 496 87 14 0 chr10 142309996 142310065 -3279223 - MER58A DNA MER1_type -9 98 29 2158 123 0 0 chr10 142311169 142311462 -3277826 + AluSg SINE Alu 6 298 -12 186 220 34 102 chr10 142313523 142313582 -3275706 - L2 LINE L2 -95 3177 3123 521 265 132 10 chr10 142314939 142315143 -3274145 + MIR SINE MIR 21 249 -13 22 35 0 0 chr10 142316817 142316846 -3272442 + AT_rich Low_complexity Low_complexity 1 29 0 501 261 126 0 chr10 142317759 142317958 -3271330 - Tigger8 DNA MER2_type -295 371 148 1986 106 6 48 chr10 142324523 142324835 -3264453 + AluSq SINE Alu 1 299 -14 406 156 13 0 chr10 142328790 142328867 -3260421 - MER116 DNA Mariner 0 80 3 1423 210 40 65 chr10 142336936 142337336 -3251952 - MLT1B LTR MaLR 0 390 1 215 325 62 0 chr10 142337337 142337417 -3251871 + MIR SINE MIR 108 192 -70 253 345 29 14 chr10 142338827 142338966 -3250322 + L1ME2 LINE L1 329 469 -5927 1140 268 57 39 chr10 142339000 142339620 -3249668 + L1ME2 LINE L1 1769 2399 -3997 * 2090 240 96 76 chr10 142339613 142340267 -3249021 + L1ME2 LINE L1 4229 4868 -1365 2103 156 0 0 chr10 142340267 142340575 -3248713 + AluSx SINE Alu 1 308 -4 2090 240 96 76 chr10 142340575 142340670 -3248618 + L1ME2 LINE L1 4868 4960 -1273 1499 113 5 5 chr10 142340670 142340892 -3248396 - L1PB1 LINE L1 -1 6150 5929 2090 240 96 76 chr10 142340892 142342099 -3247189 + L1ME2 LINE L1 4960 6223 -10 354 263 75 89 chr10 142342140 142342353 -3246935 + L1MC4 LINE L1 7829 8038 -4 252 344 92 8 chr10 142343690 142343821 -3245467 - MIR SINE MIR -102 160 19 748 236 53 8 chr10 142344646 142344961 -3244327 + MLT1F LTR MaLR 6 373 -169 201 252 264 19 chr10 142345376 142345535 -3243753 - L2 LINE L2 -222 3050 2853 1911 215 53 31 chr10 142348801 142348900 -3240388 - Charlie1b DNA MER1_type -2261 500 405 1640 131 24 98 chr10 142348900 142349237 -3240051 - AluYb8 SINE Alu -6 312 1 1911 215 53 31 chr10 142349237 142349626 -3239662 - Charlie1b DNA MER1_type -2356 405 1 2955 57 0 8 chr10 142349695 142350083 -3239205 - L1PA6 LINE L1 0 6154 5770 41607 31 22 1 chr10 142350104 142356124 -3233164 - L1PA3 LINE L1 -4 6151 2 951 56 24 0 chr10 142356124 142356249 -3233039 - L1PA6 LINE L1 -368 5786 5659 * 5385 74 4 0 chr10 142356241 142356971 -3232317 + L1P LINE L1 3533 4265 -1881 1337 117 75 0 chr10 142357214 142357428 -3231860 - MER30 DNA MER1_type 0 230 1 231 271 0 0 chr10 142358372 142358431 -3230857 + MIR SINE MIR 204 262 0 1192 280 15 35 chr10 142362769 142363172 -3226116 - L1ME1 LINE L1 -1 6165 5771 2409 231 103 57 chr10 142363175 142363498 -3225790 - L1ME1 LINE L1 -745 5401 5094 2378 83 3 13 chr10 142363498 142363812 -3225476 + AluY SINE Alu 1 311 0 2409 231 103 57 chr10 142363812 142365000 -3224288 - L1ME1 LINE L1 -1052 5094 3881 10827 191 41 38 chr10 142365028 142367971 -3221317 - L1MC3 LINE L1 0 8045 5087 1955 157 3 9 chr10 142367971 142368314 -3220974 - MER2 DNA MER2_type -3 341 1 10827 191 41 38 chr10 142368314 142368407 -3220881 - L1MC3 LINE L1 -2958 5087 4996 2896 247 96 33 chr10 142368614 142371025 -3218263 - L1MC3 LINE L1 -3081 3325 794 1042 219 213 6 chr10 142371576 142371904 -3217384 - MSTD LTR MaLR 0 396 1 2490 82 0 0 chr10 142373472 142373777 -3215511 - AluSg SINE Alu -3 307 3 256 340 40 0 chr10 142376681 142376781 -3212507 - L2 LINE L2 -22 3291 3188 209 250 9 0 chr10 142381145 142381211 -3208077 + MIR SINE MIR 41 108 -100 311 175 0 0 chr10 142383173 142383230 -3206058 - MER58A DNA MER1_type 0 224 168 421 254 36 0 chr10 142383230 142383340 -3205948 - MER58A DNA MER1_type 0 118 5 189 0 0 0 chr10 142388082 142388103 -3201185 + (TCTG)n Simple_repeat Simple_repeat 1 21 0 237 188 0 0 chr10 142393241 142393289 -3195999 + L1P4 LINE L1 5722 5769 -397 186 103 0 0 chr10 142393544 142393573 -3195715 + (GGAA)n Simple_repeat Simple_repeat 4 32 0 230 301 0 0 chr10 142396155 142396292 -3192996 + CT-rich Low_complexity Low_complexity 1 137 0 657 186 0 0 chr10 142396392 142396521 -3192767 + CT-rich Low_complexity Low_complexity 1 129 0 1034 223 101 62 chr10 142396839 142397022 -3192266 + MLT1C LTR MaLR 6 180 -287 1661 183 7 23 chr10 142397022 142397323 -3191965 + AluJo SINE Alu 1 296 -16 1034 223 101 62 chr10 142397323 142397574 -3191714 + MLT1C LTR MaLR 180 457 -10 327 330 57 41 chr10 142398390 142398584 -3190704 + L1MC4a LINE L1 4733 4929 -1217 2323 64 0 30 chr10 142398745 142399047 -3190241 + AluY SINE Alu 1 290 -21 372 291 14 7 chr10 142399122 142399297 -3189991 + L1MC4a LINE L1 5215 5391 -774 601 346 15 28 chr10 142399618 142399945 -3189343 + L1MC4a LINE L1 5563 5885 -1923 2568 68 0 10 chr10 142399960 142400267 -3189021 + AluY SINE Alu 1 304 -7 188 100 25 0 chr10 142400534 142400574 -3188714 + (TG)n Simple_repeat Simple_repeat 2 42 0 2035 162 0 3 chr10 142403016 142403325 -3185963 + AluSx SINE Alu 1 308 -4 303 327 54 27 chr10 142403985 142404240 -3185048 + L1ME LINE L1 5597 5864 -298 2264 83 52 0 chr10 142405470 142405759 -3183529 + AluSx SINE Alu 1 304 -8 254 188 220 16 chr10 142405766 142405952 -3183336 + Charlie1 DNA MER1_type 2506 2729 -32 5324 125 19 16 chr10 142406044 142407024 -3182264 + L1PB3 LINE L1 5174 6153 -1 25 0 0 0 chr10 142408410 142408435 -3180853 + AT_rich Low_complexity Low_complexity 1 25 0 235 270 9 54 chr10 142409362 142409473 -3179815 + (CA)n Simple_repeat Simple_repeat 2 107 0 374 353 8 0 chr10 142410233 142410355 -3178933 + C-rich Low_complexity Low_complexity 3 125 0 180 0 0 0 chr10 142412362 142412382 -3176906 + (A)n Simple_repeat Simple_repeat 1 20 0 238 277 119 34 chr10 142412521 142412698 -3176590 - MIR SINE MIR -55 207 16 585 266 122 16 chr10 142412783 142412971 -3176317 - L2 LINE L2 0 3313 3106 1956 354 59 16 chr10 142414205 142415212 -3174076 + L1M4 LINE L1 3654 4703 -1443 1343 210 44 44 chr10 142415235 142415668 -3173620 + L1ME2 LINE L1 5711 6143 -21 239 276 41 0 chr10 142415697 142415795 -3173493 + L1MC5 LINE L1 7800 7901 -60 273 272 37 0 chr10 142418487 142418568 -3170720 - L1ME2 LINE L1 -42 6122 6039 * 1731 222 15 2 chr10 142418567 142418964 -3170324 + L1MB3 LINE L1 5672 6073 -110 1548 242 88 32 chr10 142418962 142419545 -3169743 - L1ME2 LINE L1 -220 5944 5310 * 808 147 31 0 chr10 142419545 142419674 -3169614 - FLAM_C SINE Alu 0 133 1 1548 242 88 32 chr10 142419674 142419819 -3169469 - L1ME2 LINE L1 -854 5310 5175 246 297 102 8 chr10 142419819 142419937 -3169351 - LTR67 LTR ERVL -51 506 378 1454 208 9 15 chr10 142420021 142420353 -3168935 - L1MD3 LINE L1 -8 7987 7658 2570 265 45 44 chr10 142420354 142421444 -3167844 - L1ME2 LINE L1 -1819 4327 3237 1747 112 116 0 chr10 142421452 142421703 -3167585 - AluSx SINE Alu -3 309 30 717 267 100 46 chr10 142421707 142422169 -3167119 - MLT1H LTR MaLR -2 652 53 239 307 11 0 chr10 142423476 142423564 -3165724 - MLT1-int LTR MaLR -1269 102 14 274 264 109 32 chr10 142423777 142423997 -3165291 - MLT1H LTR MaLR -256 293 57 182 31 0 62 chr10 142425339 142425371 -3163917 + (CTGGGG)n Simple_repeat Simple_repeat 3 32 0 448 298 128 38 chr10 142425453 142425900 -3163388 + L1MC4 LINE L1 7555 8041 -1 1778 160 56 34 chr10 142430703 142431060 -3158228 + MLT1A1 LTR MaLR 1 365 0 1098 215 51 115 chr10 142433853 142433984 -3155304 - L1M4 LINE L1 -836 5310 5172 1643 184 7 0 chr10 142433984 142434262 -3155026 - AluJb SINE Alu -32 280 1 1098 215 51 115 chr10 142434262 142434524 -3154764 - L1M4 LINE L1 -974 5172 4967 2221 114 79 18 chr10 142434524 142434867 -3154421 + THE1B LTR MaLR 1 364 0 1098 215 51 115 chr10 142434867 142435081 -3154207 - L1M4 LINE L1 -1179 4967 4741 632 263 149 19 chr10 142435072 142435334 -3153954 - L1M4 LINE L1 -2667 3479 3184 * 222 250 65 56 chr10 142435362 142435470 -3153818 + MIR3 SINE MIR 100 208 0 199 405 22 32 chr10 142435591 142435776 -3153512 + L2 LINE L2 2882 3064 -208 456 337 168 36 chr10 142435891 142435996 -3153292 + L1MC4a LINE L1 4498 4588 -1558 1724 196 0 10 chr10 142435996 142436297 -3152991 + AluJo SINE Alu 1 298 -14 456 337 168 36 chr10 142436297 142436692 -3152596 + L1MC4a LINE L1 4588 5064 -1082 378 261 99 18 chr10 142436805 142437061 -3152227 + L1MC4a LINE L1 5198 5472 -748 506 254 8 16 chr10 142437071 142437193 -3152095 + L2 LINE L2 3181 3301 -12 1249 180 17 30 chr10 142437196 142437235 -3152053 - L1MB3 LINE L1 0 6183 6145 1768 186 3 0 chr10 142437235 142437520 -3151768 - AluJb SINE Alu -24 288 3 1249 180 17 30 chr10 142437520 142437775 -3151513 - L1MB3 LINE L1 -38 6145 5893 27 0 0 0 chr10 142437992 142438019 -3151269 + AT_rich Low_complexity Low_complexity 1 27 0 1926 258 72 26 chr10 142438108 142439687 -3149601 - L1ME3A LINE L1 -138 6032 4387 2364 98 0 0 chr10 142439696 142439991 -3149297 - AluY SINE Alu -12 299 5 361 254 92 14 chr10 142440051 142440193 -3149095 + L1MC4a LINE L1 5697 5849 -1959 1604 78 175 56 chr10 142440514 142440783 -3148505 - AluY SINE Alu 0 301 1 715 221 43 26 chr10 142441092 142441470 -3147818 - Charlie4a DNA MER1_type -14 494 40 638 256 113 44 chr10 142441548 142441911 -3147377 - L2 LINE L2 -57 3256 2869 369 272 44 87 chr10 142441932 142442138 -3147150 - L2 LINE L2 -563 2751 2555 4262 207 20 15 chr10 142442871 142443295 -3145993 - L1MB8 LINE L1 0 6178 5758 1894 169 7 0 chr10 142443295 142443591 -3145697 + AluJo SINE Alu 1 298 -14 4262 207 20 15 chr10 142443591 142444844 -3144444 - L1MB8 LINE L1 -420 5758 4490 1726 257 63 32 chr10 142445247 142445928 -3143360 - L1M4 LINE L1 -1174 4972 4271 1111 253 65 57 chr10 142446473 142447276 -3142012 - L1ME4a LINE L1 -96 6025 5216 229 169 0 42 chr10 142447760 142447831 -3141457 + C-rich Low_complexity Low_complexity 5 72 0 252 86 0 0 chr10 142448203 142448238 -3141050 + (TC)n Simple_repeat Simple_repeat 1 35 0 2387 86 0 7 chr10 142448240 142448542 -3140746 - AluSq SINE Alu -13 300 1 212 302 134 27 chr10 142448615 142448764 -3140524 + MIR SINE MIR 47 211 -51 185 0 0 39 chr10 142450665 142450691 -3138597 + (CCCCAG)n Simple_repeat Simple_repeat 2 26 0 22 0 0 0 chr10 142453054 142453076 -3136212 + AT_rich Low_complexity Low_complexity 1 22 0 419 241 0 0 chr10 142455655 142455738 -3133550 + L2 LINE L2 3224 3306 -7 210 71 0 0 chr10 142456676 142456704 -3132584 + (CCCCCA)n Simple_repeat Simple_repeat 3 30 0 2320 110 0 0 chr10 142458985 142459285 -3130003 + AluSx SINE Alu 1 300 -12 351 0 0 0 chr10 142462612 142462651 -3126637 + (TG)n Simple_repeat Simple_repeat 2 40 0 21 36 0 0 chr10 142470206 142470234 -3119054 + AT_rich Low_complexity Low_complexity 1 28 0 1359 220 64 15 chr10 142472769 142473096 -3116192 + L1MB7 LINE L1 5666 6008 -176 727 180 72 6 chr10 142473186 142473353 -3115935 + L1MB7 LINE L1 5991 6168 -16 2267 110 0 16 chr10 142475720 142476028 -3113260 - AluSx SINE Alu -9 303 1 214 216 0 0 chr10 142481406 142481443 -3107845 - L2 LINE L2 -18 3254 3218 1784 175 25 0 chr10 142482632 142482918 -3106370 - AluJb SINE Alu -19 293 1 525 246 87 22 chr10 142491338 142491521 -3097767 + L1MC2 LINE L1 6140 6334 -10 2372 93 3 6 chr10 142491688 142491999 -3097289 - AluSg SINE Alu 0 310 1 2229 105 34 0 chr10 142493712 142494006 -3095282 + AluSx SINE Alu 1 304 -8 479 187 223 7 chr10 142494703 142494842 -3094446 + MER53 DNA DNA 21 189 0 2165 93 25 0 chr10 142494909 142495187 -3094101 + AluSx SINE Alu 20 304 -8 901 116 0 0 chr10 142495221 142495350 -3093938 + AluSg/x SINE Alu 177 305 -7 525 249 4 0 chr10 142496770 142497007 -3092281 + (CA)n Simple_repeat Simple_repeat 1 238 0 946 184 20 15 chr10 142500240 142500436 -3088852 + L1MB5 LINE L1 5968 6164 -10 252 0 0 0 chr10 142502537 142502565 -3086723 + (T)n Simple_repeat Simple_repeat 1 28 0 270 0 0 0 chr10 142506450 142506480 -3082808 + (T)n Simple_repeat Simple_repeat 1 30 0 860 184 8 0 chr10 142520900 142521164 -3068124 + (TGGA)n Simple_repeat Simple_repeat 1 266 0 201 74 0 0 chr10 142521234 142521261 -3068027 + (TCCA)n Simple_repeat Simple_repeat 2 28 0 748 244 44 29 chr10 142521711 142521986 -3067302 + MER33 DNA MER1_type 2 280 -44 221 269 0 0 chr10 142526894 142526946 -3062342 + (CATATA)n Simple_repeat Simple_repeat 3 54 0 200 321 0 12 chr10 142527913 142527994 -3061294 + C-rich Low_complexity Low_complexity 4 83 0 354 45 0 0 chr10 142531958 142532002 -3057286 + (CA)n Simple_repeat Simple_repeat 1 44 0 303 283 46 59 chr10 142532773 142532925 -3056363 + MIR SINE MIR 76 225 -37 208 254 28 14 chr10 142533385 142533456 -3055832 + L3 LINE CR1 1495 1566 -11 2173 129 3 3 chr10 142533590 142533892 -3055396 + AluSx SINE Alu 1 302 -10 702 221 108 0 chr10 142534015 142534173 -3055115 + FAM SINE Alu 1 175 0 267 260 10 64 chr10 142534503 142534613 -3054675 - MIR SINE MIR -54 154 50 225 261 72 0 chr10 142537406 142537475 -3051813 + MIR SINE MIR 108 181 -81 569 282 59 0 chr10 142537731 142537933 -3051355 - MER20 DNA MER1_type -5 214 1 2774 196 30 54 chr10 142539837 142540636 -3048652 + L1M3 LINE L1 4682 5499 -672 2247 128 0 0 chr10 142540636 142540948 -3048340 + AluSx SINE Alu 1 312 0 2774 196 30 54 chr10 142540948 142541170 -3048118 + L1M3 LINE L1 5499 5673 -498 1596 195 20 14 chr10 142541170 142541467 -3047821 - AluJb SINE Alu -13 299 1 2774 196 30 54 chr10 142541467 142541573 -3047715 + L1M3 LINE L1 5673 5780 -391 273 119 0 0 chr10 142541573 142541615 -3047673 + (TG)n Simple_repeat Simple_repeat 2 43 0 356 22 0 0 chr10 142541617 142541662 -3047626 - MADE1 DNA Mariner -3 77 33 524 73 0 0 chr10 142541662 142541730 -3047558 + AluSx SINE Alu 2 69 -244 1779 107 0 8 chr10 142541881 142542123 -3047165 + AluSx SINE Alu 69 308 -2 586 107 36 0 chr10 142542130 142542242 -3047046 + L1MB3 LINE L1 6068 6183 0 243 0 0 0 chr10 142542667 142542694 -3046594 + (TTCA)n Simple_repeat Simple_repeat 4 30 0 354 280 38 6 chr10 142544715 142544872 -3044416 - L1ME4a LINE L1 -5 6116 5955 241 310 123 13 chr10 142544975 142545130 -3044158 - L1ME4a LINE L1 -321 5800 5629 2093 146 0 3 chr10 142545700 142546009 -3043279 - AluJb SINE Alu -4 308 1 2648 189 22 18 chr10 142546321 142546863 -3042425 + MLT2B3 LTR ERVL 1 434 -19 205 277 68 0 chr10 142546881 142547029 -3042259 + (TCTA)n Simple_repeat Simple_repeat 4 161 0 261 273 52 0 chr10 142547046 142547200 -3042088 + (TCTA)n Simple_repeat Simple_repeat 4 165 0 242 266 58 0 chr10 142547226 142547365 -3041923 + (TCTA)n Simple_repeat Simple_repeat 4 150 0 364 107 0 4 chr10 142547633 142547697 -3041591 + MLT2B2 LTR ERVL 458 514 -1 225 94 0 0 chr10 142549385 142549417 -3039871 + (T)n Simple_repeat Simple_repeat 1 32 0 195 162 0 0 chr10 142549692 142549729 -3039559 + (CA)n Simple_repeat Simple_repeat 1 37 0 442 119 0 0 chr10 142550504 142550571 -3038717 + MER53 DNA DNA 1 67 -122 205 125 0 0 chr10 142550900 142550932 -3038356 + L2 LINE L2 3264 3295 -18 1757 155 6 43 chr10 142554761 142555083 -3034205 + AluJb SINE Alu 1 310 -2 195 114 0 0 chr10 142556008 142556043 -3033245 + (TTTTTG)n Simple_repeat Simple_repeat 3 37 0 286 334 0 0 chr10 142556933 142557040 -3032248 + MIR SINE MIR 18 124 -84 828 124 0 0 chr10 142561557 142561694 -3027594 + (GGGGA)n Simple_repeat Simple_repeat 2 138 0 2142 183 54 50 chr10 142564407 142564483 -3024805 + L1MC2 LINE L1 5823 5897 -447 2253 92 0 7 chr10 142564483 142564789 -3024499 + AluSq SINE Alu 6 309 -4 2142 183 54 50 chr10 142564789 142565230 -3024058 + L1MC2 LINE L1 5897 6342 -2 2186 82 3 35 chr10 142565526 142565842 -3023446 + AluSp SINE Alu 7 312 -1 181 173 0 39 chr10 142566496 142566548 -3022740 + G-rich Low_complexity Low_complexity 5 54 0 22 0 0 0 chr10 142568896 142568918 -3020370 + AT_rich Low_complexity Low_complexity 1 22 0 300 200 0 0 chr10 142569535 142569600 -3019688 + A-rich Low_complexity Low_complexity 1 65 0 21 36 0 0 chr10 142575283 142575311 -3013977 + GC_rich Low_complexity Low_complexity 1 28 0 31 0 0 0 chr10 142575402 142575433 -3013855 + GC_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr10 142577027 142577055 -3012233 + AT_rich Low_complexity Low_complexity 1 28 0 189 107 0 0 chr10 142577123 142577151 -3012137 + (T)n Simple_repeat Simple_repeat 1 28 0 56 29 0 0 chr10 142580061 142580131 -3009157 + GC_rich Low_complexity Low_complexity 1 70 0 23 68 0 0 chr10 142580689 142580733 -3008555 + GC_rich Low_complexity Low_complexity 1 44 0 288 217 0 56 chr10 142580870 142581031 -3008257 + (CCG)n Simple_repeat Simple_repeat 3 154 0 21 0 0 0 chr10 142586396 142586417 -3002871 + GC_rich Low_complexity Low_complexity 1 21 0 28 86 0 0 chr10 142587814 142587884 -3001404 + GC_rich Low_complexity Low_complexity 1 70 0 27 49 0 0 chr10 142588248 142588289 -3000999 + GC_rich Low_complexity Low_complexity 1 41 0 25 31 0 0 chr10 142588336 142588368 -3000920 + GC_rich Low_complexity Low_complexity 1 32 0 24 32 0 0 chr10 142588402 142588433 -3000855 + GC_rich Low_complexity Low_complexity 1 31 0 26 64 0 0 chr10 142589332 142589379 -2999909 + GC_rich Low_complexity Low_complexity 1 47 0 26 88 0 0 chr10 142589425 142589493 -2999795 + GC_rich Low_complexity Low_complexity 1 68 0 207 0 0 0 chr10 142590133 142590156 -2999132 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 185 265 145 24 chr10 142591008 142591091 -2998197 - MIR SINE MIR -142 120 28 199 209 23 0 chr10 142591819 142591862 -2997426 - L2 LINE L2 -91 3222 3179 198 328 90 8 chr10 142592396 142592518 -2996770 + L2 LINE L2 3182 3313 0 317 299 78 32 chr10 142592539 142592693 -2996595 - L1MC4 LINE L1 0 8042 7882 1722 239 69 39 chr10 142594131 142594741 -2994547 + MLT1E2 LTR MaLR 3 626 0 247 235 111 86 chr10 142594906 142595068 -2994220 - MLT1H LTR MaLR -175 374 209 590 286 95 22 chr10 142595982 142596268 -2993020 + MLT1J2 LTR MaLR 123 429 -21 1950 138 26 3 chr10 142596310 142596615 -2992673 + AluSx SINE Alu 1 312 0 752 29 79 0 chr10 142596619 142596758 -2992530 + GA-rich Low_complexity Low_complexity 3 152 0 24 67 0 0 chr10 142596936 142596981 -2992307 + AT_rich Low_complexity Low_complexity 1 45 0 5837 221 45 20 chr10 142597151 142598417 -2990871 + L1MC/D LINE L1 1 1461 -5079 2200 97 3 0 chr10 142598417 142598715 -2990573 + AluSg SINE Alu 1 299 -11 5837 221 45 20 chr10 142598715 142599320 -2989968 + L1MC/D LINE L1 1461 2049 -4491 1049 174 45 14 chr10 142599356 142599667 -2989621 + L1MC/D LINE L1 2406 2726 -3814 3118 125 60 15 chr10 142599678 142600797 -2988491 + L1PB1 LINE L1 1 1069 -5793 2057 135 3 0 chr10 142600797 142601101 -2988187 + AluSg SINE Alu 6 310 0 3118 125 60 15 chr10 142601101 142601600 -2987688 + L1PB1 LINE L1 1069 1544 -5318 1865 157 7 3 chr10 142601600 142601905 -2987383 + AluSx SINE Alu 1 306 -6 3118 125 60 15 chr10 142601905 142602577 -2986711 + L1PB1 LINE L1 1544 2185 -4677 2022 126 3 13 chr10 142602577 142602878 -2986410 - AluSx SINE Alu -14 298 1 3118 125 60 15 chr10 142602878 142603510 -2985778 + L1PB1 LINE L1 2185 3410 -3452 9979 162 28 5 chr10 142603511 142605781 -2983507 + L1PB1 LINE L1 3884 6101 -766 189 0 0 0 chr10 142605781 142605802 -2983486 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 9979 162 28 5 chr10 142605802 142606088 -2983200 + L1PB1 LINE L1 6101 6379 -488 303 28 0 0 chr10 142606088 142606124 -2983164 + (CA)n Simple_repeat Simple_repeat 2 37 0 9979 162 28 5 chr10 142606124 142606482 -2982806 + L1PB1 LINE L1 6379 6866 -1 27 0 0 0 chr10 142606482 142606509 -2982779 + AT_rich Low_complexity Low_complexity 1 27 0 1536 237 30 60 chr10 142606647 142607058 -2982230 + L1MC/D LINE L1 2859 3248 -3292 2083 115 0 0 chr10 142607058 142607353 -2981935 - AluSx SINE Alu -17 295 1 1536 237 30 60 chr10 142607353 142607545 -2981743 + L1MC/D LINE L1 3248 3444 -3096 1700 197 20 7 chr10 142607562 142608128 -2981160 + L1MC/D LINE L1 5386 5959 -677 1199 115 26 5 chr10 142608129 142608321 -2980967 + L1M1 LINE L1 17 212 -7353 480 199 28 50 chr10 142608319 142608460 -2980828 + L1MDa LINE L1 1504 1641 -4899 * 1645 133 6 98 chr10 142608466 142608975 -2980313 + AluSx SINE Alu 5 482 0 408 220 0 11 chr10 142608975 142609078 -2980210 + L1MDa LINE L1 1528 1720 -4820 * 568 254 5 37 chr10 142609077 142609190 -2980098 - L1M4 LINE L1 -3822 2324 2217 2164 92 0 3 chr10 142609190 142609499 -2979789 - AluY SINE Alu 0 308 1 568 254 5 37 chr10 142609499 142609573 -2979715 - L1M4 LINE L1 -3929 2217 2142 * 5201 159 2 16 chr10 142609570 142610389 -2978899 + L1MA3 LINE L1 218 1025 -6540 * 7170 196 31 63 chr10 142610387 142613271 -2976017 + L1MA3 LINE L1 2461 5248 -2317 228 380 0 0 chr10 142613474 142613566 -2975722 + G-rich Low_complexity Low_complexity 1 92 0 304 318 5 58 chr10 142613743 142613932 -2975356 + A-rich Low_complexity Low_complexity 2 180 0 * 347 313 8 22 chr10 142613806 142613940 -2975348 + GA-rich Low_complexity Low_complexity 2 133 0 8438 126 11 13 chr10 142614113 142616537 -2972751 + L1MA3 LINE L1 5301 7722 -2 1693 148 0 24 chr10 142616559 142616890 -2972398 - AluSx SINE Alu 0 324 1 2409 200 46 86 chr10 142616907 142617627 -2971661 + L1MD1 LINE L1 5551 6241 -1 1023 181 0 0 chr10 142617632 142617798 -2971490 + FRAM SINE Alu 1 166 0 188 132 0 26 chr10 142617798 142617836 -2971452 + (GGAA)n Simple_repeat Simple_repeat 1 37 0 1068 87 35 0 chr10 142617836 142618008 -2971280 + GA-rich Low_complexity Low_complexity 1 178 0 194 221 253 21 chr10 142618045 142618140 -2971148 - MIR SINE MIR -98 164 48 371 296 0 0 chr10 142618453 142618578 -2970710 + LTR16C LTR ERVL 301 425 -66 2308 138 8 13 chr10 142618589 142618966 -2970322 + THE1C LTR MaLR 1 375 0 1666 227 75 23 chr10 142619076 142619556 -2969732 - MLT1D LTR MaLR 0 505 1 260 224 53 0 chr10 142619623 142619662 -2969626 - AluS SINE Alu -223 80 44 1884 145 3 0 chr10 142619662 142619959 -2969329 - AluJb SINE Alu -14 298 1 260 224 53 0 chr10 142619959 142619995 -2969293 - AluS SINE Alu -259 44 1 243 118 0 0 chr10 142619997 142620031 -2969257 - Alu SINE Alu -274 34 1 636 279 50 72 chr10 142621894 142622296 -2966992 + HAL1 LINE L1 1374 1766 -741 656 235 132 37 chr10 142622724 142622967 -2966321 + L2 LINE L2 3046 3311 -2 319 243 110 51 chr10 142623188 142623443 -2965845 + HAL1 LINE L1 2230 2499 -8 396 265 54 48 chr10 142623710 142623876 -2965412 + L1M4 LINE L1 5213 5379 -767 266 315 0 0 chr10 142623909 142623982 -2965306 + GA-rich Low_complexity Low_complexity 1 73 0 1913 207 69 29 chr10 142624304 142624514 -2964774 - MLT1C LTR MaLR 0 467 267 2131 147 95 5 chr10 142624514 142624903 -2964385 + MSTA LTR MaLR 1 424 -4 1913 207 69 29 chr10 142624903 142625141 -2964147 - MLT1C LTR MaLR -200 267 1 31 68 0 0 chr10 142625239 142625298 -2963990 + AT_rich Low_complexity Low_complexity 1 59 0 935 219 45 3 chr10 142625621 142625870 -2963418 + MER7A DNA MER2_type 2 337 0 267 138 53 85 chr10 142625893 142625987 -2963301 + L1ME4a LINE L1 6022 6112 -9 414 144 19 18 chr10 142627044 142627118 -2962170 + MLT1C LTR MaLR 60 136 -254 807 173 3 0 chr10 142627118 142627266 -2962022 + MSTB1 LTR MaLR 1 152 -280 3800 127 43 0 chr10 142627266 142627847 -2961441 - MER4B LTR ERV1 -4 606 1 1048 107 13 0 chr10 142627847 142627996 -2961292 + MSTB1 LTR MaLR 281 431 -1 893 239 45 36 chr10 142627999 142628308 -2960980 + MLT1C LTR MaLR 142 453 -14 261 320 101 28 chr10 142629142 142629389 -2959899 + MLT1I LTR MaLR 113 377 -32 1133 218 16 29 chr10 142629668 142629976 -2959312 + L1MB8 LINE L1 5874 6177 -1 557 253 132 62 chr10 142631527 142631993 -2957295 + MLT1D LTR MaLR 1 467 0 2793 147 74 4 chr10 142633294 142633778 -2955510 + L1PA16 LINE L1 5640 6157 -9 298 313 0 0 chr10 142634558 142634638 -2954650 - MIR SINE MIR -105 157 78 367 279 139 0 chr10 142634680 142634802 -2954486 - MIR SINE MIR -22 240 102 687 204 52 23 chr10 142636565 142636737 -2952551 + HsTC2c DNA Tc2 513 689 -40 425 232 89 71 chr10 142636763 142636931 -2952357 + MER112 DNA MER1_type 79 249 -11 259 253 25 0 chr10 142637018 142637097 -2952191 - MER33 DNA MER1_type 0 363 283 688 184 24 0 chr10 142637100 142637225 -2952063 + FLAM_A SINE Alu 1 128 -14 1047 163 54 58 chr10 142637227 142637487 -2951801 - MER33 DNA MER1_type -74 250 1 675 247 7 0 chr10 142637485 142637631 -2951657 - MER58B DNA MER1_type 0 341 195 * 1342 221 100 26 chr10 142639258 142639688 -2949600 + MLT1C LTR MaLR 6 467 0 225 93 130 37 chr10 142641430 142641591 -2947697 + (CCTG)n Simple_repeat Simple_repeat 1 176 0 415 118 143 25 chr10 142641617 142641778 -2947510 + (CCTG)n Simple_repeat Simple_repeat 1 180 0 241 273 0 0 chr10 142642260 142642315 -2946973 + MIR SINE MIR 86 140 -68 1213 218 74 40 chr10 142642552 142642929 -2946359 + MLT1B LTR MaLR 1 390 0 1902 92 88 0 chr10 142643676 142643949 -2945339 + AluSg SINE Alu 1 297 -13 369 62 0 0 chr10 142643949 142643997 -2945291 + (TA)n Simple_repeat Simple_repeat 2 49 0 1137 214 83 128 chr10 142646166 142646564 -2942724 - MLT1C LTR MaLR -3 464 8 1817 201 40 66 chr10 142646773 142647291 -2941997 - MLT1D LTR MaLR 0 505 1 1459 238 132 32 chr10 142647291 142647710 -2941578 - L1ME LINE L1 -3297 2783 2407 2152 63 0 73 chr10 142647710 142648026 -2941262 - AluY SINE Alu -18 293 1 1459 238 132 32 chr10 142648026 142648093 -2941195 - L1ME LINE L1 -3673 2407 2348 2205 114 0 0 chr10 142648093 142648401 -2940887 - AluSg SINE Alu -2 308 1 1459 238 132 32 chr10 142648401 142648543 -2940745 - L1ME LINE L1 -3732 2348 2222 3698 163 28 22 chr10 142648543 142648690 -2940598 - L1MB2 LINE L1 -3 6168 6023 2083 132 154 0 chr10 142648690 142649061 -2940227 - MSTA LTR MaLR 0 428 1 3698 163 28 22 chr10 142649061 142649632 -2939656 - L1MB2 LINE L1 -148 6023 5446 1459 238 132 32 chr10 142649632 142649791 -2939497 - L1ME LINE L1 -3858 2222 2036 264 207 207 0 chr10 142649880 142649967 -2939321 - L1ME LINE L1 -4582 1498 1394 2340 78 0 0 chr10 142649967 142650261 -2939027 - AluY SINE Alu -17 294 1 2754 108 7 32 chr10 142650261 142650555 -2938733 + MER75 DNA T2_type 91 372 -142 1941 107 50 0 chr10 142650555 142650835 -2938453 + AluSg SINE Alu 1 294 -16 2754 108 7 32 chr10 142650835 142650974 -2938314 + MER75 DNA T2_type 372 513 -1 1920 261 49 33 chr10 142650980 142651450 -2937838 - L1ME LINE L1 -4880 1200 721 2238 48 0 0 chr10 142651450 142651720 -2937568 - AluY SINE Alu -13 298 29 1920 261 49 33 chr10 142651720 142652064 -2937224 - L1ME LINE L1 -5359 721 384 1893 169 20 9 chr10 142652322 142652671 -2936617 - MLT1B LTR MaLR -37 353 1 181 307 70 18 chr10 142652814 142652928 -2936360 - MIR SINE MIR -61 201 82 * 265 263 256 31 chr10 142652917 142652991 -2936297 - MIR SINE MIR -7 255 199 1579 222 11 26 chr10 142652991 142653369 -2935919 - MLT1A2 LTR MaLR 0 374 3 265 263 256 31 chr10 142653369 142653454 -2935834 - MIR SINE MIR -63 199 60 378 276 20 0 chr10 142656179 142656277 -2933011 - MER81 DNA DNA -12 102 3 2297 210 36 10 chr10 142656378 142656878 -2932410 - MLT2B1 LTR ERVL 0 520 8 1804 113 95 7 chr10 142657771 142658045 -2931243 + AluSq SINE Alu 6 303 -10 413 250 105 39 chr10 142658558 142658805 -2930483 - L1MC/D LINE L1 -682 5651 5384 281 252 10 0 chr10 142659016 142659119 -2930169 + (CA)n Simple_repeat Simple_repeat 1 104 0 460 333 0 16 chr10 142659148 142659331 -2929957 + (CA)n Simple_repeat Simple_repeat 1 180 0 305 295 149 14 chr10 142660033 142660314 -2928974 + L1MC5 LINE L1 7609 7927 -34 435 119 0 0 chr10 142661196 142661263 -2928025 + (GA)n Simple_repeat Simple_repeat 2 68 0 395 261 34 28 chr10 142663295 142663471 -2925817 + (CGGGG)n Simple_repeat Simple_repeat 3 179 0 22 56 0 0 chr10 142663767 142663803 -2925485 + AT_rich Low_complexity Low_complexity 1 36 0 1557 201 3 14 chr10 142665914 142666207 -2923081 - AluJo SINE Alu -22 290 1 1346 124 201 4 chr10 142667490 142667724 -2921564 + AluJb SINE Alu 1 280 -32 2157 79 0 45 chr10 142670256 142670573 -2918715 - AluSc SINE Alu 0 304 1 3780 198 30 0 chr10 142671216 142671987 -2917301 - L1MB1 LINE L1 -1 6167 5374 2656 167 39 81 chr10 142671984 142672680 -2916608 + L1MB1 LINE L1 4708 5374 -772 * 2412 92 0 13 chr10 142672866 142673180 -2916108 + AluSg SINE Alu 1 310 0 2372 78 0 38 chr10 142673753 142673791 -2915497 - AluY SINE Alu -3 308 270 189 0 0 0 chr10 142673791 142673812 -2915476 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 2372 78 0 38 chr10 142673812 142674093 -2915195 - AluY SINE Alu -41 270 1 1631 186 3 14 chr10 142674099 142674394 -2914894 - AluJb SINE Alu -20 292 1 935 163 38 11 chr10 142674404 142674588 -2914700 - L1MB3 LINE L1 -2 6181 5993 302 270 43 43 chr10 142674968 142675083 -2914205 - MIR SINE MIR -29 233 119 322 200 0 0 chr10 142675329 142675384 -2913904 + MER5A DNA MER1_type 41 95 -94 355 308 130 0 chr10 142675465 142675650 -2913638 + MIR SINE MIR 35 243 -19 240 305 35 14 chr10 142675919 142676060 -2913228 + L1ME4a LINE L1 4509 4652 -1494 243 188 135 10 chr10 142676594 142676690 -2912598 + L1ME4a LINE L1 5256 5363 -2445 595 260 98 66 chr10 142676779 142677279 -2912009 + L1MC5 LINE L1 7290 7805 -156 326 282 103 60 chr10 142677465 142677744 -2911544 + L1ME4a LINE L1 5612 5878 -243 2578 53 3 3 chr10 142677744 142678048 -2911240 + AluY SINE Alu 1 304 -7 1859 146 14 14 chr10 142678058 142678353 -2910935 + AluJb SINE Alu 1 295 -17 326 282 103 60 chr10 142678353 142678530 -2910758 + L1ME4a LINE L1 5886 6099 -22 2038 148 60 35 chr10 142679459 142679994 -2909294 + MLT2A2 LTR ERVL 1 554 0 291 307 35 18 chr10 142680172 142680286 -2909002 - MIR SINE MIR -56 152 37 236 303 0 0 chr10 142681760 142681826 -2907462 + MIR SINE MIR 191 256 -6 24 32 0 0 chr10 142681879 142681910 -2907378 + AT_rich Low_complexity Low_complexity 1 31 0 2008 148 0 19 chr10 142683385 142683696 -2905592 - AluJb SINE Alu -7 305 1 293 250 26 0 chr10 142683841 142683917 -2905371 - L3 LINE CR1 -402 1175 1098 2041 220 55 78 chr10 142685478 142685532 -2903756 + L1M4c LINE L1 913 967 -5417 2336 109 3 0 chr10 142685532 142685836 -2903452 + AluSq SINE Alu 1 305 -8 2041 220 55 78 chr10 142685836 142686664 -2902624 + L1M4c LINE L1 967 1775 -4609 412 298 148 49 chr10 142686693 142686819 -2902469 - L1M4 LINE L1 -1778 4368 4256 893 228 0 0 chr10 142686819 142686977 -2902311 - FRAM SINE Alu -8 158 1 412 298 148 49 chr10 142686977 142687356 -2901932 - L1M4 LINE L1 -1890 4256 3813 229 322 89 0 chr10 142687603 142687749 -2901539 - L1MEd LINE L1 -4711 1418 1260 315 243 84 48 chr10 142687993 142688117 -2901171 - L1ME LINE L1 -348 5822 5690 1854 122 0 12 chr10 142688117 142688384 -2900904 - AluSx SINE Alu 0 301 38 315 243 84 48 chr10 142688384 142688439 -2900849 - L1ME LINE L1 -480 5690 5638 310 266 14 22 chr10 142688576 142688715 -2900573 - L1ME LINE L1 -929 5430 5293 2278 93 14 0 chr10 142688837 142689126 -2900162 - AluSp SINE Alu -20 293 1 270 267 126 76 chr10 142689132 142689488 -2899800 - L1ME LINE L1 -1091 5055 4682 748 196 54 27 chr10 142689496 142689734 -2899554 - L1MEd LINE L1 -4910 1209 970 1004 147 101 5 chr10 142689869 142690067 -2899221 - Tigger1 DNA MER2_type 0 2418 2202 847 182 0 13 chr10 142690056 142690215 -2899073 - Tigger1 DNA MER2_type -2261 157 1 * 304 285 115 39 chr10 142690562 142690692 -2898596 - L1MEd LINE L1 -5737 382 243 321 327 72 13 chr10 142691361 142691514 -2897774 + MIR3 SINE MIR 15 176 -32 285 165 25 13 chr10 142692126 142692205 -2897083 + (CA)n Simple_repeat Simple_repeat 1 80 0 478 150 30 20 chr10 142692707 142692807 -2896481 - LTR33A LTR ERVL -21 502 402 1808 117 157 17 chr10 142692807 142693158 -2896130 + MSTA LTR MaLR 1 400 -28 989 138 19 25 chr10 142693175 142693335 -2895953 - AluSg/x SINE Alu 0 312 154 251 150 0 0 chr10 142693335 142693375 -2895913 + MSTA LTR MaLR 389 428 0 423 296 45 28 chr10 142693479 142693658 -2895630 - LTR33A LTR ERVL -341 182 1 239 288 65 20 chr10 142697896 142698049 -2891239 + MER113 DNA MER1_type? 6 165 -356 7471 249 93 40 chr10 142698270 142699381 -2889907 + L1MC4a LINE L1 2201 3251 -4557 905 152 0 0 chr10 142699381 142699513 -2889775 - FLAM_C SINE Alu 0 133 2 7471 249 93 40 chr10 142699513 142699594 -2889694 + L1MC4a LINE L1 3251 3326 -4482 2155 117 47 33 chr10 142699594 142699953 -2889335 + THE1B LTR MaLR 1 364 0 7471 249 93 40 chr10 142699953 142701231 -2888057 + L1MC4a LINE L1 3326 4534 -3274 2267 110 0 17 chr10 142701231 142701532 -2887756 + AluSg SINE Alu 1 296 -14 7471 249 93 40 chr10 142701532 142701854 -2887434 + L1MC4a LINE L1 4534 4837 -2971 222 37 0 0 chr10 142701854 142701881 -2887407 + (CA)n Simple_repeat Simple_repeat 2 28 0 7471 249 93 40 chr10 142701881 142702976 -2886312 + L1MC4a LINE L1 4837 7808 0 769 361 82 32 chr10 142703024 142703736 -2885552 - L3 LINE CR1 -208 1369 623 2289 105 0 3 chr10 142705303 142705598 -2883690 + AluSq SINE Alu 1 294 -19 24 0 0 0 chr10 142705662 142705686 -2883602 + AT_rich Low_complexity Low_complexity 1 24 0 387 284 18 65 chr10 142706568 142706737 -2882551 - MIR SINE MIR -42 220 60 1905 235 11 9 chr10 142706856 142707319 -2881969 + L1MB5 LINE L1 4736 5199 -947 2152 105 8 68 chr10 142707324 142710933 -2878355 + L1PA7 LINE L1 12 3153 -3001 2368 73 10 20 chr10 142710933 142711233 -2878055 + AluY SINE Alu 1 297 -14 2152 105 8 68 chr10 142711233 142714066 -2875222 + L1PA7 LINE L1 3153 6154 0 278 167 64 26 chr10 142714066 142714144 -2875144 + L1MB5 LINE L1 5192 5272 -874 1209 138 0 0 chr10 142714160 142714327 -2874961 - AluSg/x SINE Alu -9 303 137 503 176 81 7 chr10 142714327 142714463 -2874825 + L1MB5 LINE L1 5261 5406 -768 789 190 7 0 chr10 142714474 142714611 -2874677 + FLAM_C SINE Alu 2 139 -4 1926 223 154 13 chr10 142714614 142715225 -2874063 + L1MB5 LINE L1 5435 6131 -43 2181 132 0 0 chr10 142715243 142715546 -2873742 + AluSx SINE Alu 1 303 -9 223 286 31 41 chr10 142715775 142715873 -2873415 - L2 LINE L2 -2 3270 3174 2327 101 3 7 chr10 142716007 142716313 -2872975 + AluSx SINE Alu 1 305 -7 1715 142 64 7 chr10 142716700 142717023 -2872265 - AluSx SINE Alu 0 312 1 2435 92 7 0 chr10 142717030 142717336 -2871952 - AluSg SINE Alu 0 310 3 2047 111 39 0 chr10 142717452 142717732 -2871556 + AluSg SINE Alu 1 291 -19 1260 258 73 72 chr10 142717739 142718138 -2871150 + L1MEc LINE L1 888 1285 -5111 2080 128 14 3 chr10 142718138 142718435 -2870853 + AluSx SINE Alu 1 300 -12 1260 258 73 72 chr10 142718435 142718787 -2870501 + L1MEc LINE L1 1285 1643 -4753 2079 101 50 10 chr10 142718787 142719084 -2870204 + AluSc SINE Alu 1 309 0 1260 258 73 72 chr10 142719084 142719184 -2870104 + L1MEc LINE L1 1643 1741 -4655 1050 161 0 17 chr10 142719187 142719361 -2869927 + AluJb SINE Alu 1 171 -141 1409 226 85 44 chr10 142719365 142719481 -2869807 - L1M4 LINE L1 -3389 2757 2647 1942 135 35 3 chr10 142719481 142719770 -2869518 - AluSx SINE Alu -8 304 7 1409 226 85 44 chr10 142719770 142720180 -2869108 - L1M4 LINE L1 -3499 2647 2203 2177 110 3 13 chr10 142720180 142720481 -2868807 - AluSp SINE Alu -15 298 1 1409 226 85 44 chr10 142720481 142720527 -2868761 - L1M4 LINE L1 -3943 2203 2160 1043 166 51 0 chr10 142720531 142720706 -2868582 + AluSg/x SINE Alu 111 294 -16 2181 121 3 13 chr10 142720727 142721033 -2868255 + AluJo SINE Alu 1 303 -9 321 284 32 21 chr10 142721350 142721445 -2867843 + L2 LINE L2 3172 3267 -5 2134 139 3 0 chr10 142722127 142722430 -2866858 - AluSx SINE Alu -8 304 1 681 272 0 0 chr10 142722470 142722617 -2866671 + MIR SINE MIR 4 150 -112 2207 94 4 0 chr10 142722655 142722930 -2866358 + AluSq SINE Alu 5 280 -33 216 0 0 0 chr10 142722944 142722968 -2866320 + (CAAAA)n Simple_repeat Simple_repeat 3 26 0 356 327 114 15 chr10 142726088 142726482 -2862806 + L2 LINE L2 2302 2734 -580 216 73 0 91 chr10 142726763 142726818 -2862470 + (CTATA)n Simple_repeat Simple_repeat 4 53 0 228 269 87 0 chr10 142726848 142726952 -2862336 + MLT-int LTR MaLR 3 115 -1620 205 215 25 63 chr10 142727448 142727527 -2861761 + L2 LINE L2 3179 3254 -18 241 309 99 20 chr10 142728980 142729181 -2860107 + MLT1L LTR MaLR 176 392 -223 512 243 122 39 chr10 142729366 142729547 -2859741 + MIR SINE MIR 56 251 -11 690 168 228 104 chr10 142729596 142729781 -2859507 - MER46C DNA MER2_type -2 336 175 1905 159 0 28 chr10 142729781 142730101 -2859187 + AluJb SINE Alu 1 311 -1 690 168 228 104 chr10 142730101 142730213 -2859075 - MER46C DNA MER2_type -163 175 2 661 192 79 25 chr10 142730313 142730516 -2858772 - LTR54 LTR ERV1 -5 505 292 410 157 58 74 chr10 142730541 142730662 -2858626 - LTR54 LTR ERV1 -330 180 62 230 235 109 17 chr10 142730768 142730887 -2858401 + MER113 DNA MER1_type? 1 130 -391 843 193 64 54 chr10 142730954 142730977 -2858311 + L1MB1 LINE L1 5033 5054 -1092 2030 164 3 3 chr10 142730977 142731281 -2858007 + AluSx SINE Alu 1 304 -8 2193 89 3 46 chr10 142731283 142731607 -2857681 + AluSg SINE Alu 1 310 0 843 193 64 54 chr10 142731607 142731822 -2857466 + L1MB1 LINE L1 5054 5280 -866 2477 95 0 3 chr10 142731822 142732127 -2857161 + AluSc SINE Alu 1 304 -5 843 193 64 54 chr10 142732127 142732179 -2857109 + L1MB1 LINE L1 5280 5330 -816 926 192 150 0 chr10 142732180 142732373 -2856915 + AluJo SINE Alu 84 305 -7 2974 214 18 69 chr10 142732375 142732537 -2856751 + L1MB1 LINE L1 5325 5494 -695 2279 101 14 0 chr10 142732537 142732824 -2856464 + AluSx SINE Alu 1 291 -21 1469 183 13 47 chr10 142732826 142733143 -2856145 + AluJb SINE Alu 1 306 -6 2974 214 18 69 chr10 142733143 142733870 -2855418 + L1MB1 LINE L1 5495 6171 -18 918 129 0 0 chr10 142733896 142734028 -2855260 + FLAM_C SINE Alu 2 133 0 1642 163 11 25 chr10 142734039 142734321 -2854967 + AluJo SINE Alu 1 278 -34 351 0 0 0 chr10 142734323 142734362 -2854926 + (TAAA)n Simple_repeat Simple_repeat 4 42 0 4527 157 64 70 chr10 142734526 142735603 -2853685 - MER11C LTR ERVK 0 1071 1 988 185 17 12 chr10 142735618 142735791 -2853497 + FAM SINE Alu 2 175 0 180 167 0 0 chr10 142735795 142735825 -2853463 + MIR SINE MIR 137 166 -96 216 0 0 0 chr10 142735840 142735864 -2853424 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2253 78 0 18 chr10 142735872 142736020 -2853268 - AluSg SINE Alu -31 279 137 2886 16 0 3 chr10 142736020 142736332 -2852956 - AluYb8 SINE Alu -7 311 1 2253 78 0 18 chr10 142736332 142736467 -2852821 - AluSg SINE Alu -173 137 1 279 178 30 10 chr10 142736682 142736752 -2852536 + MIR SINE MIR 110 181 -27 2130 162 74 2 chr10 142737196 142737590 -2851698 - MSTB LTR MaLR -4 422 1 215 340 70 0 chr10 142737599 142737699 -2851589 + L2 LINE L2 2972 3078 -235 524 117 53 11 chr10 142737772 142737866 -2851422 + MER4A LTR ERV1 1 98 -566 1973 98 17 22 chr10 142737866 142738213 -2851075 + MER4A LTR ERV1 261 664 0 434 282 106 0 chr10 142738348 142738490 -2850798 - MIR SINE MIR -71 191 35 2450 57 10 10 chr10 142739768 142740065 -2849223 - AluSp SINE Alu -16 297 1 2281 122 0 0 chr10 142740199 142740502 -2848786 + AluSx SINE Alu 1 303 -9 21 0 0 0 chr10 142740651 142740672 -2848616 + AT_rich Low_complexity Low_complexity 1 21 0 1667 177 7 10 chr10 142741408 142741702 -2847586 + AluJb SINE Alu 1 293 -19 2385 100 51 14 chr10 142741964 142742275 -2847013 + THE1B LTR MaLR 1 328 -36 2440 101 3 0 chr10 142742275 142742583 -2846705 - AluSp SINE Alu -4 309 1 2385 100 51 14 chr10 142742583 142742622 -2846666 + THE1B LTR MaLR 328 364 0 934 133 0 15 chr10 142744433 142744568 -2844720 + FLAM_C SINE Alu 1 133 0 234 0 0 0 chr10 142747108 142747134 -2842154 + (TC)n Simple_repeat Simple_repeat 1 26 0 225 0 0 0 chr10 142747133 142747158 -2842130 + (CA)n Simple_repeat Simple_repeat 1 25 0 * 1338 95 0 0 chr10 142747366 142747535 -2841753 + AluSg/x SINE Alu 137 305 -5 1232 128 24 211 chr10 142748128 142748476 -2840812 + MER39B LTR ERV1 6 237 -416 2142 132 3 22 chr10 142748476 142748794 -2840494 + AluSx SINE Alu 1 312 0 1232 128 24 211 chr10 142748794 142748939 -2840349 + MER39B LTR ERV1 237 407 -246 1284 145 44 12 chr10 142749488 142749737 -2839551 + MER39B LTR ERV1 397 653 0 2567 66 0 0 chr10 142749865 142750170 -2839118 + AluY SINE Alu 1 305 -6 2494 73 3 0 chr10 142750505 142750808 -2838480 + AluSp SINE Alu 1 304 -9 1252 150 73 63 chr10 142750932 142751155 -2838133 - L1MD2 LINE L1 -3 6356 6128 1584 176 3 36 chr10 142751155 142751461 -2837827 - AluJo SINE Alu -16 296 1 1252 150 73 63 chr10 142751461 142751537 -2837751 - L1MD2 LINE L1 -231 6128 6054 577 197 146 0 chr10 142751674 142751852 -2837436 - Charlie5 DNA MER1_type -10 2602 2399 228 286 154 49 chr10 142751875 142752200 -2837088 - L2 LINE L2 -16 3256 2898 215 191 0 48 chr10 142753611 142753674 -2835614 + (CGG)n Simple_repeat Simple_repeat 2 61 0 711 246 65 52 chr10 142754660 142754892 -2834396 + MIR SINE MIR 28 262 0 1890 152 0 3 chr10 142754936 142755238 -2834050 - AluJb SINE Alu -11 301 1 1871 146 3 7 chr10 142755259 142755561 -2833727 - AluJb SINE Alu -11 301 1 2141 88 23 36 chr10 142756050 142756357 -2832931 - AluSx SINE Alu -9 303 1 2468 74 0 10 chr10 142756560 142756869 -2832419 + AluY SINE Alu 1 306 -5 1695 138 63 4 chr10 142756875 142757143 -2832145 + AluJo SINE Alu 11 294 -18 352 246 143 26 chr10 142757894 142758236 -2831052 - L1ME4a LINE L1 -201 5920 5483 1189 143 178 16 chr10 142758257 142758515 -2830773 + AluJo SINE Alu 1 300 -2 861 205 105 32 chr10 142758564 142759000 -2830288 - L1ME2 LINE L1 -7 6157 5662 524 225 136 12 chr10 142759074 142759243 -2830045 - MLT1J2 LTR MaLR -257 193 4 800 195 26 7 chr10 142760739 142760893 -2828395 - FRAM SINE Alu -9 157 1 2109 128 0 3 chr10 142760904 142761193 -2828095 - AluSx SINE Alu -16 296 9 5243 55 2 2 chr10 142761493 142762133 -2827155 - L1PA8 LINE L1 0 6172 5533 2205 107 3 0 chr10 142762583 142762892 -2826396 + AluSx SINE Alu 1 312 0 2035 98 39 11 chr10 142763008 142763293 -2825995 - AluSc SINE Alu -16 293 1 1190 175 112 30 chr10 142764962 142765230 -2824058 + AluJo SINE Alu 1 290 -12 1652 178 25 4 chr10 142765348 142765629 -2823659 - AluJb SINE Alu -21 291 5 243 0 0 0 chr10 142765636 142765663 -2823625 + (T)n Simple_repeat Simple_repeat 1 27 0 1663 155 34 31 chr10 142765987 142766278 -2823010 + AluJo SINE Alu 5 296 -16 1678 128 0 0 chr10 142766434 142766669 -2822619 + AluSg/x SINE Alu 71 305 -5 22 0 0 0 chr10 142767136 142767158 -2822130 + AT_rich Low_complexity Low_complexity 1 22 0 2266 115 0 6 chr10 142767159 142767472 -2821816 + AluY SINE Alu 1 311 0 2429 81 0 0 chr10 142768132 142768428 -2820860 - AluSg SINE Alu -14 296 1 3123 68 0 12 chr10 142768570 142768981 -2820307 - L1PA6 LINE L1 0 6154 5749 13843 132 26 43 chr10 142768981 142769227 -2820061 - L1P LINE L1 -3782 2364 2115 2284 116 7 0 chr10 142769227 142769521 -2819767 - AluSx SINE Alu -16 296 1 13843 132 26 43 chr10 142769521 142771669 -2817619 - L1P LINE L1 -4031 2115 11 780 278 185 21 chr10 142771946 142772174 -2817114 - L2 LINE L2 -8 3305 3116 890 206 0 12 chr10 142772174 142772334 -2816954 - FRAM SINE Alu -4 162 5 780 278 185 21 chr10 142772334 142773213 -2816075 - L2 LINE L2 -197 3116 1907 1620 200 21 48 chr10 142773276 142773651 -2815637 - MLT1A1 LTR MaLR 0 365 1 344 243 117 9 chr10 142773651 142773762 -2815526 + MIR SINE MIR 85 207 -55 271 246 0 0 chr10 142773780 142773841 -2815447 + MIR SINE MIR 176 236 -26 345 324 9 0 chr10 142774162 142774270 -2815018 + MIR SINE MIR 6 114 -148 1757 182 65 113 chr10 142774272 142774696 -2814592 - MLT2B3 LTR ERVL 0 554 164 219 36 0 0 chr10 142774696 142774724 -2814564 + (C)n Simple_repeat Simple_repeat 1 28 0 1757 182 65 113 chr10 142774724 142774881 -2814407 - MLT2B3 LTR ERVL -390 164 1 26 0 0 0 chr10 142775062 142775088 -2814200 + AT_rich Low_complexity Low_complexity 1 26 0 1280 92 6 0 chr10 142775418 142775582 -2813706 - AluSq SINE Alu -15 298 134 30 59 0 0 chr10 142776282 142776333 -2812955 + AT_rich Low_complexity Low_complexity 1 51 0 358 313 90 0 chr10 142778381 142778525 -2810763 - MIR3 SINE MIR -2 206 50 2019 113 0 20 chr10 142779183 142779475 -2809813 - AluSp SINE Alu -17 296 11 32 43 0 0 chr10 142780237 142780283 -2809005 + AT_rich Low_complexity Low_complexity 1 46 0 2271 99 10 0 chr10 142780345 142780638 -2808650 + AluSx SINE Alu 1 296 -16 705 217 0 63 chr10 142783199 142783374 -2805914 - FRAM SINE Alu -21 155 1 26 0 0 0 chr10 142784216 142784242 -2805046 + AT_rich Low_complexity Low_complexity 1 26 0 2265 72 0 10 chr10 142785656 142785949 -2803339 - AluY SINE Alu -21 290 1 23 0 0 0 chr10 142786361 142786384 -2802904 + AT_rich Low_complexity Low_complexity 1 23 0 2089 92 46 3 chr10 142788054 142788368 -2800920 + AluSc SINE Alu 1 309 0 1896 179 3 0 chr10 142788886 142789183 -2800105 + AluJb SINE Alu 1 298 -14 2171 111 7 3 chr10 142789862 142790151 -2799137 + AluSx SINE Alu 1 290 -22 954 201 5 55 chr10 142791640 142791839 -2797449 + MER58A DNA MER1_type 36 224 0 2400 72 13 10 chr10 142793315 142793622 -2795666 - AluSq SINE Alu -5 308 1 375 121 0 0 chr10 142793937 142793995 -2795293 + (TCCC)n Simple_repeat Simple_repeat 3 60 0 368 347 46 20 chr10 142794631 142794827 -2794461 - MIR SINE MIR -15 247 47 1943 136 16 35 chr10 142795446 142795756 -2793532 - AluSx SINE Alu -8 304 1 2130 99 7 3 chr10 142795924 142796206 -2793082 - AluSx SINE Alu -29 283 1 875 115 25 0 chr10 142796218 142796340 -2792948 - AluSq/x SINE Alu -187 125 1 1369 142 8 6 chr10 142797298 142797545 -2791743 - AluJb SINE Alu -16 296 1 1823 151 10 16 chr10 142800460 142800764 -2788524 - AluJb SINE Alu -10 302 1 1227 144 52 13 chr10 142800893 142801122 -2788166 + MER39 LTR ERV1 462 699 -8 1890 167 27 0 chr10 142801581 142801880 -2787408 + AluJb SINE Alu 1 307 -5 968 190 94 7 chr10 142802357 142802717 -2786571 - MER39 LTR ERV1 0 707 287 3122 134 60 18 chr10 142802735 142803303 -2785985 - LTR38B LTR ERV1 -18 592 1 1003 188 101 50 chr10 142803303 142803345 -2785943 - MER39 LTR ERV1 -416 291 253 2399 80 3 0 chr10 142803345 142803647 -2785641 - AluSq SINE Alu -10 303 1 1003 188 101 50 chr10 142803647 142803881 -2785407 - MER39 LTR ERV1 -454 253 1 2471 220 137 13 chr10 142804455 142805307 -2783981 - MER45B DNA AcHobo -54 986 1 673 254 75 0 chr10 142805535 142805736 -2783552 - MIR SINE MIR -37 225 10 222 0 35 0 chr10 142806336 142806365 -2782923 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 2417 46 0 0 chr10 142806365 142806645 -2782643 - AluY SINE Alu -31 280 1 384 194 83 9 chr10 142806647 142806755 -2782533 - MER115 DNA AcHobo -69 624 509 1261 264 205 16 chr10 142808369 142808979 -2780309 - L1MC3 LINE L1 0 7785 7037 1823 144 47 7 chr10 142808979 142809277 -2780011 - AluJo SINE Alu -2 310 1 1261 264 205 16 chr10 142809277 142809333 -2779955 - L1MC3 LINE L1 -748 7037 6993 846 259 112 6 chr10 142810459 142810772 -2778516 - L1MD2 LINE L1 -21 6338 5993 200 261 0 29 chr10 142810982 142811051 -2778237 + C-rich Low_complexity Low_complexity 6 72 0 410 135 0 21 chr10 142811082 142811178 -2778110 + (TCTCTG)n Simple_repeat Simple_repeat 6 99 0 300 182 34 0 chr10 142811676 142811764 -2777524 + GA-rich Low_complexity Low_complexity 4 94 0 445 274 36 10 chr10 142813196 142813457 -2775831 - MLT1H LTR MaLR -195 354 40 212 255 0 0 chr10 142813517 142813564 -2775724 + (TG)n Simple_repeat Simple_repeat 1 47 0 327 350 0 19 chr10 142813564 142813667 -2775621 + L1MC4 LINE L1 6595 6695 -1347 301 415 0 0 chr10 142813578 142813684 -2775604 - L1MC4 LINE L1 -1340 6702 6597 * 2219 112 3 0 chr10 142815490 142815794 -2773494 + AluSx SINE Alu 1 305 -7 2304 107 0 0 chr10 142816466 142816774 -2772514 + AluSx SINE Alu 1 308 -4 186 303 101 37 chr10 142816816 142816925 -2772363 + MER5B DNA MER1_type 1 116 -62 428 282 9 0 chr10 142818659 142818769 -2770519 + MER81 DNA DNA 1 111 -3 349 326 0 0 chr10 142818812 142818984 -2770304 + (AGGTG)n Simple_repeat Simple_repeat 5 176 0 291 245 5 78 chr10 142819088 142819280 -2770008 + G-rich Low_complexity Low_complexity 1 178 0 246 319 12 12 chr10 142819210 142819379 -2769909 + (AGGTG)n Simple_repeat Simple_repeat 3 171 0 * 1709 146 58 7 chr10 142819467 142819742 -2769546 + AluJb SINE Alu 1 289 -23 1926 103 37 0 chr10 142819772 142820069 -2769219 - AluSx SINE Alu 0 307 1 283 192 60 36 chr10 142820178 142820345 -2768943 + (CACAG)n Simple_repeat Simple_repeat 5 175 0 272 106 0 47 chr10 142820928 142821013 -2768275 + (CCCCCT)n Simple_repeat Simple_repeat 1 81 0 197 19 115 39 chr10 142821071 142821123 -2768165 + (CCCG)n Simple_repeat Simple_repeat 2 57 0 212 245 189 28 chr10 142821950 142822056 -2767232 - MIR SINE MIR -61 147 25 233 303 110 18 chr10 142823322 142823431 -2765857 - MIR SINE MIR -66 196 78 254 363 64 18 chr10 142823775 142823946 -2765342 + MIR SINE MIR 6 184 -78 493 188 7 10 chr10 142824339 142824645 -2764643 + (CA)n Simple_repeat Simple_repeat 1 305 0 439 143 42 6 chr10 142824672 142824840 -2764448 + (CA)n Simple_repeat Simple_repeat 1 174 0 365 159 7 22 chr10 142824908 142825046 -2764242 + (CA)n Simple_repeat Simple_repeat 1 136 0 223 290 76 48 chr10 142825258 142825403 -2763885 + L3 LINE CR1 1346 1494 -83 599 349 88 0 chr10 142825557 142825841 -2763447 + L3 LINE CR1 1110 1418 -159 292 299 88 7 chr10 142826387 142826524 -2762764 - LTR16A LTR ERVL -15 435 288 1431 246 89 25 chr10 142827595 142828034 -2761254 - MLT1C LTR MaLR 0 467 1 1207 183 24 63 chr10 142828175 142828657 -2760631 + MER4A LTR ERV1 1 420 -186 526 158 196 8 chr10 142828684 142828817 -2760471 + MER4C LTR ERV1 281 438 -27 2252 148 50 3 chr10 142830499 142830878 -2758410 - MER48 LTR ERV1 -1 397 1 251 250 31 0 chr10 142831967 142832031 -2757257 + MER5B DNA MER1_type 5 70 -108 371 280 45 32 chr10 142832302 142832459 -2756829 + MER5A DNA MER1_type 1 159 -30 369 376 109 45 chr10 142833189 142833609 -2755679 + L1MC4a LINE L1 5525 5971 -1837 330 318 118 41 chr10 142833594 142833764 -2755524 + L1ME4a LINE L1 5939 6121 0 * 2319 84 3 3 chr10 142833809 142834118 -2755170 - AluSq SINE Alu -4 309 1 3261 193 22 8 chr10 142834533 142835095 -2754193 - L1MB3 LINE L1 0 6183 5610 1625 174 44 20 chr10 142835095 142835393 -2753895 - AluJb SINE Alu -2 310 6 3261 193 22 8 chr10 142835393 142835461 -2753827 - L1MB3 LINE L1 -573 5610 5544 30 0 0 0 chr10 142836035 142836065 -2753223 + AT_rich Low_complexity Low_complexity 1 30 0 378 331 15 8 chr10 142836119 142836252 -2753036 - MIR3 SINE MIR -16 192 59 358 274 28 0 chr10 142836376 142836482 -2752806 - MIR SINE MIR -77 185 77 2387 171 18 34 chr10 142836566 142836935 -2752353 + MER57B LTR ERV1 1 363 -71 2327 92 0 3 chr10 142836935 142837241 -2752047 - AluSq SINE Alu -8 305 1 2387 171 18 34 chr10 142837241 142837310 -2751978 + MER57B LTR ERV1 363 432 -2 192 235 0 0 chr10 142838401 142838469 -2750819 + (TG)n Simple_repeat Simple_repeat 2 69 0 241 292 25 56 chr10 142838823 142838984 -2750304 + LTR33 LTR ERVL 23 178 -343 2663 138 25 10 chr10 142839159 142839564 -2749724 + LTR57 LTR ERVL 1 411 0 2312 88 10 0 chr10 142840412 142840718 -2748570 - AluSc SINE Alu 0 309 1 4352 272 117 26 chr10 142841006 142842443 -2746845 - L1MC3 LINE L1 0 7785 6115 1932 98 38 24 chr10 142842443 142842730 -2746558 + AluSg SINE Alu 1 291 -19 4352 272 117 26 chr10 142842730 142843312 -2745976 - L1MC3 LINE L1 -1670 6115 5587 365 348 82 14 chr10 142843579 142843786 -2745502 - MIR SINE MIR -41 221 1 214 311 61 61 chr10 142843838 142844050 -2745238 - L2 LINE L2 -557 2757 2546 508 156 11 0 chr10 142844169 142844259 -2745029 - MLT1B LTR MaLR -6 384 294 * 786 188 0 13 chr10 142844255 142844409 -2744879 - MLT1B LTR MaLR -238 152 1 352 267 186 0 chr10 142844552 142844724 -2744564 + MLT1G1 LTR MaLR 40 243 -352 1139 255 54 9 chr10 142844728 142845061 -2744227 - MER87 LTR ERV1 0 541 194 593 239 21 14 chr10 142845153 142845295 -2743993 + MLT1G3 LTR MaLR 163 305 -225 350 205 79 63 chr10 142845302 142845429 -2743859 + MLT1G3 LTR MaLR 415 543 -6 1750 164 8 44 chr10 142846607 142846974 -2742314 - MER4D LTR ERV1 -3 900 547 630 279 35 10 chr10 142846942 142847143 -2742145 - MER4E LTR ERV1 -571 208 3 * 416 266 189 21 chr10 142848348 142848728 -2740560 - MLT1D LTR MaLR -17 488 45 366 318 130 38 chr10 142851122 142851361 -2737927 + L1ME4a LINE L1 5831 6091 -30 846 244 125 23 chr10 142852266 142852720 -2736568 - MLT1E3 LTR MaLR 0 624 113 285 390 87 4 chr10 142852944 142853185 -2736103 + L3 LINE CR1 1316 1576 -1 184 304 25 51 chr10 142853922 142854001 -2735287 + MIR SINE MIR 83 159 -103 875 213 117 27 chr10 142854549 142854849 -2734439 - L1ME1 LINE L1 -4 6162 5836 * 3676 233 67 15 chr10 142854842 142856074 -2733214 - L1ME1 LINE L1 -1024 5122 3826 234 0 0 0 chr10 142858196 142858222 -2731066 + (TC)n Simple_repeat Simple_repeat 1 26 0 225 0 0 0 chr10 142858221 142858246 -2731042 + (CA)n Simple_repeat Simple_repeat 1 25 0 * 1338 95 0 0 chr10 142858454 142858623 -2730665 + AluSg/x SINE Alu 137 305 -5 1232 128 24 211 chr10 142859216 142859564 -2729724 + MER39B LTR ERV1 6 237 -416 2142 132 3 22 chr10 142859564 142859882 -2729406 + AluSx SINE Alu 1 312 0 1232 128 24 211 chr10 142859882 142860027 -2729261 + MER39B LTR ERV1 237 407 -246 1284 145 44 12 chr10 142860576 142860825 -2728463 + MER39B LTR ERV1 397 653 0 2567 66 0 0 chr10 142860953 142861258 -2728030 + AluY SINE Alu 1 305 -6 2494 73 3 0 chr10 142861593 142861896 -2727392 + AluSp SINE Alu 1 304 -9 1252 150 73 63 chr10 142862020 142862243 -2727045 - L1MD2 LINE L1 -3 6356 6128 1584 176 3 36 chr10 142862243 142862549 -2726739 - AluJo SINE Alu -16 296 1 1252 150 73 63 chr10 142862549 142862625 -2726663 - L1MD2 LINE L1 -231 6128 6054 577 197 146 0 chr10 142862762 142862940 -2726348 - Charlie5 DNA MER1_type -10 2602 2399 228 286 154 49 chr10 142862963 142863288 -2726000 - L2 LINE L2 -16 3256 2898 215 191 0 48 chr10 142864699 142864762 -2724526 + (CGG)n Simple_repeat Simple_repeat 2 61 0 711 246 65 52 chr10 142865749 142865981 -2723307 + MIR SINE MIR 28 262 0 1890 152 0 3 chr10 142866025 142866327 -2722961 - AluJb SINE Alu -11 301 1 2139 111 10 3 chr10 142866348 142866645 -2722643 - AluSg SINE Alu -11 299 1 1235 175 112 30 chr10 142868314 142868582 -2720706 + AluJo SINE Alu 1 290 -12 1680 186 24 3 chr10 142868690 142868981 -2720307 - AluJb SINE Alu -11 301 5 243 0 0 0 chr10 142868988 142869015 -2720273 + (T)n Simple_repeat Simple_repeat 1 27 0 1703 168 34 17 chr10 142869339 142869630 -2719658 + AluJo SINE Alu 5 300 -12 1710 128 0 0 chr10 142869786 142870021 -2719267 + AluSg/x SINE Alu 73 307 -5 22 0 0 0 chr10 142870488 142870510 -2718778 + AT_rich Low_complexity Low_complexity 1 22 0 2293 115 0 6 chr10 142870511 142870824 -2718464 + AluY SINE Alu 1 311 0 2441 84 0 0 chr10 142871481 142871780 -2717508 - AluSg SINE Alu -11 299 1 3124 68 0 12 chr10 142871922 142872333 -2716955 - L1PA6 LINE L1 0 6154 5749 13113 132 26 43 chr10 142872333 142872579 -2716709 - L1P LINE L1 -3782 2364 2115 2304 116 7 0 chr10 142872579 142872873 -2716415 - AluSx SINE Alu -16 296 1 13113 132 26 43 chr10 142872873 142875021 -2714267 - L1P LINE L1 -4031 2115 11 1135 270 210 23 chr10 142875298 142875526 -2713762 - L2 LINE L2 -8 3305 3121 935 219 0 0 chr10 142875526 142875686 -2713602 - FRAM SINE Alu -2 164 5 1135 270 210 23 chr10 142875686 142876565 -2712723 - L2 LINE L2 -192 3121 1907 1662 200 21 48 chr10 142876628 142877003 -2712285 - MLT1A1 LTR MaLR 0 365 1 393 243 117 9 chr10 142877003 142877114 -2712174 + MIR SINE MIR 85 207 -55 299 246 0 0 chr10 142877132 142877193 -2712095 + MIR SINE MIR 176 236 -26 375 324 9 0 chr10 142877514 142877622 -2711666 + MIR SINE MIR 6 114 -148 1271 189 100 15 chr10 142877624 142877894 -2711394 - MLT2B2 LTR ERVL 0 515 223 201 147 0 0 chr10 142877931 142877965 -2711323 + (GA)n Simple_repeat Simple_repeat 1 34 0 3068 254 105 17 chr10 142878149 142879724 -2709564 - L1MEc LINE L1 -2452 3763 2100 366 23 0 0 chr10 142879734 142879777 -2709511 + (ATG)n Simple_repeat Simple_repeat 2 44 0 1151 257 63 54 chr10 142879813 142880447 -2708841 - L1MEc LINE L1 -4654 1742 1103 1186 126 0 12 chr10 142880551 142880718 -2708570 - AluSq SINE Alu -53 260 96 2072 272 67 52 chr10 142880720 142881769 -2707519 - L1MEc LINE L1 -5296 1100 37 557 317 75 22 chr10 142882344 142882571 -2706717 + MIR SINE MIR 14 252 -10 285 300 194 12 chr10 142882677 142882837 -2706451 + MER5A DNA MER1_type 1 189 0 2290 106 0 7 chr10 142884859 142885162 -2704126 - AluSx SINE Alu -11 301 1 853 230 10 6 chr10 142885180 142885389 -2703899 + MER51A LTR ERV1 427 640 0 1769 108 67 197 chr10 142885512 142886019 -2703269 - MLT2A2 LTR ERVL -10 443 3 1910 209 75 116 chr10 142886136 142886465 -2702823 - L1MC5 LINE L1 -279 7682 7341 222 118 0 0 chr10 142886465 142886499 -2702789 + (TG)n Simple_repeat Simple_repeat 2 35 0 1910 209 75 116 chr10 142886499 142887260 -2702028 - L1MC5 LINE L1 -620 7341 6637 1406 122 0 15 chr10 142887306 142887502 -2701786 + AluSx SINE Alu 1 193 -119 347 333 36 46 chr10 142887522 142887717 -2701571 - L1MC4a LINE L1 -1213 6595 6403 1906 145 14 3 chr10 142887919 142888215 -2701073 - AluSx SINE Alu -13 299 1 437 288 128 19 chr10 142888244 142888674 -2700614 - L1MC4a LINE L1 -1631 6177 5701 233 324 21 35 chr10 142888783 142888925 -2700363 - L1MC5 LINE L1 -783 7178 7039 754 271 57 4 chr10 142889077 142889324 -2699964 - L1MD3 LINE L1 -5 7990 7731 281 244 12 0 chr10 142889422 142889508 -2699780 + (TG)n Simple_repeat Simple_repeat 2 88 0 733 228 32 11 chr10 142889513 142889768 -2699520 - L1MC5 LINE L1 -1003 6805 6543 276 350 10 0 chr10 142889878 142889981 -2699307 - MLT1I LTR MaLR -3 406 303 422 250 62 9 chr10 142890311 142890423 -2698865 - MLT1C LTR MaLR 0 467 350 1825 235 24 15 chr10 142890924 142891387 -2697901 - MLT1C LTR MaLR 0 467 1 216 352 112 8 chr10 142892722 142892766 -2696522 + L2 LINE L2 3134 3172 -100 381 22 0 0 chr10 142892766 142892812 -2696476 + (TG)n Simple_repeat Simple_repeat 2 47 0 216 352 112 8 chr10 142892812 142892892 -2696396 + L2 LINE L2 3172 3271 -1 246 103 224 0 chr10 142894692 142894750 -2694538 - MLT1C LTR MaLR -387 80 10 203 246 33 33 chr10 142895344 142895405 -2693883 + L2 LINE L2 3212 3272 0 501 321 72 19 chr10 142895624 142895942 -2693346 - L1MC5 LINE L1 -1910 5898 5564 225 291 94 17 chr10 142896380 142896497 -2692791 - MIR SINE MIR -116 146 21 1159 240 60 45 chr10 142897378 142897649 -2691639 - MLT1C LTR MaLR -9 458 176 2997 112 30 5 chr10 142897649 142898086 -2691202 - MER83 LTR ERV1 0 448 1 1159 240 60 45 chr10 142898086 142898260 -2691028 - MLT1C LTR MaLR -291 176 6 951 182 0 12 chr10 142899613 142899778 -2689510 - FRAM SINE Alu -20 156 1 465 269 33 69 chr10 142899782 142900027 -2689261 - HAL1 LINE L1 -2 2505 2270 762 218 73 29 chr10 142900038 142900313 -2688975 - HAL1 LINE L1 -1219 1288 1002 857 188 84 136 chr10 142900652 142901057 -2688231 - MLT1B LTR MaLR 0 390 7 567 305 149 48 chr10 142901300 142901802 -2687486 - HAL1 LINE L1 -1953 554 2 2436 116 8 0 chr10 142903875 142904230 -2685058 - THE1B LTR MaLR -6 358 1 288 298 166 39 chr10 142904520 142904725 -2684563 + MIR SINE MIR 3 233 -29 196 287 106 0 chr10 142905678 142905772 -2683516 - MIR SINE MIR -40 222 119 488 236 9 0 chr10 142905944 142906054 -2683234 - MER3 DNA MER1_type 0 209 99 22 0 0 0 chr10 142906060 142906082 -2683206 + AT_rich Low_complexity Low_complexity 1 22 0 594 38 0 0 chr10 142906082 142906161 -2683127 - L1PA3 LINE L1 0 6155 6077 1909 207 38 45 chr10 142906638 142907145 -2682143 - MLT1D LTR MaLR 0 505 3 279 274 167 37 chr10 142907198 142907443 -2681845 - MLT1H LTR MaLR -12 537 261 234 294 56 70 chr10 142907697 142907840 -2681448 + MIR3 SINE MIR 5 145 -63 230 331 70 14 chr10 142909606 142909748 -2679540 + L2 LINE L2 3122 3271 -1 472 273 133 0 chr10 142910173 142910338 -2678950 + MER63A DNA MER1_type 5 191 -19 347 237 13 0 chr10 142910939 142911015 -2678273 - MER58 DNA MER1_type -247 94 18 271 301 0 0 chr10 142911166 142911249 -2678039 + MARNA DNA Mariner 276 358 -228 1666 130 3 53 chr10 142911249 142911533 -2677755 - AluSx SINE Alu 0 312 43 1184 224 111 48 chr10 142913299 142913733 -2675555 - MLT1C LTR MaLR 0 467 7 26 0 0 0 chr10 142914172 142914198 -2675090 + AT_rich Low_complexity Low_complexity 1 26 0 396 272 185 0 chr10 142914721 142914883 -2674405 + L1ME LINE L1 5627 5818 -303 401 274 188 27 chr10 142914924 142915147 -2674141 + MIR SINE MIR 2 260 -2 2220 209 22 7 chr10 142915687 142916141 -2673147 + MER65C LTR ERV1 1 461 0 299 308 36 10 chr10 142916231 142916426 -2672862 - L2 LINE L2 -563 2751 2552 277 304 69 54 chr10 142917090 142917366 -2671922 - L1M4 LINE L1 -3627 2519 2240 1111 256 47 44 chr10 142918322 142918709 -2670579 + MLT1B LTR MaLR 1 388 -2 2322 85 0 31 chr10 142918839 142919158 -2670130 - AluY SINE Alu -2 309 1 1908 167 15 26 chr10 142919200 142919541 -2669747 + MER1B DNA MER1_type 1 337 0 324 289 107 13 chr10 142920014 142920173 -2669115 - MIR SINE MIR -24 238 65 625 159 40 16 chr10 142920910 142921036 -2668252 - MER20 DNA MER1_type -57 162 34 382 272 130 57 chr10 142921464 142921832 -2667456 - MLT1J1 LTR MaLR -51 395 1 2503 71 0 0 chr10 142923285 142923580 -2665708 + AluY SINE Alu 1 295 -16 390 319 110 25 chr10 142924465 142924819 -2664469 + L2 LINE L2 2004 2387 -927 262 219 176 40 chr10 142925945 142926168 -2663120 + MLT1G LTR MaLR 316 590 0 189 121 0 0 chr10 142926837 142926870 -2662418 + (TG)n Simple_repeat Simple_repeat 1 33 0 2371 57 0 30 chr10 142926975 142927271 -2662017 + AluY SINE Alu 16 302 -9 470 290 149 32 chr10 142927676 142928172 -2661116 + MLT1H1 LTR MaLR 2 555 0 3678 111 0 6 chr10 142930029 142930543 -2658745 + MER9 LTR ERVK 1 511 0 20008 70 9 1 chr10 142930543 142933042 -2656246 + HERVK9 LTR ERVK 1 2519 -3397 7849 83 12 18 chr10 142983042 142984169 -2605119 - HERVH LTR ERV1 -5984 1729 609 285 91 0 0 chr10 142984136 142984180 -2605108 - HERVH LTR ERV1 -6946 767 724 * 185 0 40 0 chr10 142984450 142984475 -2604813 + (TG)n Simple_repeat Simple_repeat 2 27 0 352 285 95 11 chr10 142985017 142985196 -2604092 + MIR SINE MIR 66 259 -3 4744 201 12 6 chr10 142985576 142986579 -2602709 + L1 LINE L1 3296 4304 -1842 1443 89 0 0 chr10 142986679 142986869 -2602419 + L1PA7 LINE L1 5965 6154 0 225 108 0 0 chr10 142988215 142988252 -2601036 + (CA)n Simple_repeat Simple_repeat 2 38 0 303 325 80 44 chr10 142989018 142989267 -2600021 - L1ME LINE L1 -605 5516 5259 5080 189 4 1 chr10 142990148 142991197 -2598091 - L1PBa LINE L1 -3022 3840 2788 410 134 0 0 chr10 142991297 142991364 -2597924 + Alu SINE Alu 243 309 -3 2439 184 57 8 chr10 142991365 142991855 -2597433 + L1MD2 LINE L1 5737 6250 -109 353 219 0 0 chr10 142992414 142992478 -2596810 + LTR16C LTR ERVL 418 481 -10 2123 134 0 0 chr10 142993145 142993444 -2595844 + AluSc SINE Alu 1 299 -10 351 322 36 107 chr10 142993590 142993975 -2595313 - L2 LINE L2 0 3272 2915 363 207 24 0 chr10 142995636 142995718 -2593570 + MLT2F LTR ERVL 570 653 -10 2181 132 0 0 chr10 142995848 142996152 -2593136 - AluSx SINE Alu -8 304 1 1698 148 14 7 chr10 142996168 142996459 -2592829 + L1MC1 LINE L1 5771 6063 -270 3632 120 37 32 chr10 142996472 142997097 -2592191 + LTR1 LTR ERV1 16 643 -142 537 290 131 6 chr10 142997202 142997378 -2591910 + LTR40a LTR ERVL 67 264 -255 371 307 34 80 chr10 142997756 142998020 -2591268 - L2 LINE L2 -9 3263 3012 274 341 33 42 chr10 142998052 142998266 -2591022 - MIR SINE MIR -31 231 20 534 221 0 0 chr10 142998444 142998557 -2590731 + L1MA4 LINE L1 5977 6089 -211 769 117 0 70 chr10 142998657 142998785 -2590503 - FLAM_C SINE Alu -19 124 6 2099 223 42 26 chr10 142998787 142999486 -2589802 - L1 LINE L1 -3372 3010 2298 536 210 34 8 chr10 142999475 142999594 -2589694 - L1 LINE L1 -5766 537 416 * 307 270 71 32 chr10 142999767 142999893 -2589395 + L2 LINE L2 3183 3313 0 374 272 48 41 chr10 142999998 143000145 -2589143 - MLT1J LTR MaLR -338 173 26 200 361 0 0 chr10 143000696 143000757 -2588531 + L3 LINE CR1 1428 1488 -89 1402 142 0 0 chr10 143001639 143001829 -2587459 + AluSg/x SINE Alu 92 281 -31 354 23 0 0 chr10 143001830 143001873 -2587415 + (CA)n Simple_repeat Simple_repeat 2 44 0 1161 261 117 22 chr10 143001919 143002413 -2586875 - L1ME3A LINE L1 -215 5955 5415 270 0 0 0 chr10 143002571 143002601 -2586687 + (CA)n Simple_repeat Simple_repeat 2 31 0 436 178 85 39 chr10 143003528 143003657 -2585631 - MLT1J2 LTR MaLR -313 137 3 313 264 13 57 chr10 143003667 143003826 -2585462 - HAL1 LINE L1 -295 2212 2061 734 235 56 0 chr10 143004087 143004283 -2585005 - HAL1 LINE L1 -802 1705 1499 417 218 198 85 chr10 143004696 143005342 -2583946 - L2 LINE L2 -1243 2071 1353 514 273 52 21 chr10 143006043 143006237 -2583051 - MIR SINE MIR -56 206 7 281 302 56 0 chr10 143006238 143006364 -2582924 + MIR SINE MIR 109 241 -21 389 266 9 9 chr10 143006770 143006879 -2582409 - MIR SINE MIR -118 144 36 1570 197 10 61 chr10 143006917 143007328 -2581960 + MLT1B LTR MaLR 1 390 0 239 257 27 14 chr10 143007329 143007403 -2581885 + GA-rich Low_complexity Low_complexity 5 79 0 454 250 61 12 chr10 143008440 143008604 -2580684 - LTR16C LTR ERVL -2 489 318 893 164 57 0 chr10 143008872 143009031 -2580257 + MSTB LTR MaLR 211 378 -48 622 147 0 0 chr10 143009036 143009131 -2580157 - L1MB1 LINE L1 -3 6165 6071 5265 167 25 21 chr10 143009131 143009271 -2580017 - L1 LINE L1 -1018 5128 4990 1535 203 14 14 chr10 143009271 143009557 -2579731 - AluJo SINE Alu -21 291 6 5265 167 25 21 chr10 143009557 143010647 -2578641 - L1 LINE L1 -1156 4990 3905 342 205 0 0 chr10 143010761 143010839 -2578449 + (TG)n Simple_repeat Simple_repeat 2 79 0 351 318 0 9 chr10 143010874 143010981 -2578307 + MLT1J LTR MaLR 100 205 -306 436 194 0 74 chr10 143011042 143011150 -2578138 - MER5A DNA MER1_type -89 100 1 327 261 193 34 chr10 143012178 143012416 -2576872 - L1MC/D LINE L1 -1972 5836 5561 234 230 40 81 chr10 143012655 143012768 -2576520 - L1MC4 LINE L1 0 8042 7935 2327 57 3 7 chr10 143012768 143013064 -2576224 - AluY SINE Alu -16 295 1 234 230 40 81 chr10 143013064 143013098 -2576190 - L1MC4 LINE L1 -107 7935 7901 13633 133 31 42 chr10 143013695 143014037 -2575251 - L1PA7 LINE L1 -311 5843 5499 2153 116 7 0 chr10 143014037 143014331 -2574957 - AluSx SINE Alu -16 296 1 13633 133 31 42 chr10 143014331 143016442 -2572846 - L1PA7 LINE L1 -655 5499 47 1872 146 0 13 chr10 143016961 143017319 -2571969 - AluSx SINE Alu 0 312 1 284 330 79 11 chr10 143017887 143018141 -2571147 + L2 LINE L2 2584 2941 -331 2166 214 22 7 chr10 143018141 143018595 -2570693 - MER65C LTR ERV1 0 461 1 284 330 79 11 chr10 143018595 143018703 -2570585 + L2 LINE L2 2941 3040 -232 493 274 188 27 chr10 143019135 143019358 -2569930 - MIR SINE MIR -2 260 2 386 272 185 0 chr10 143019399 143019561 -2569727 - L1ME LINE L1 -303 5818 5627 26 0 0 0 chr10 143020084 143020110 -2569178 + AT_rich Low_complexity Low_complexity 1 26 0 1200 224 111 48 chr10 143022405 143022839 -2566449 - MLT1C LTR MaLR 0 467 7 26 0 0 0 chr10 143023278 143023304 -2565984 + AT_rich Low_complexity Low_complexity 1 26 0 2599 113 8 0 chr10 143025626 143025981 -2563307 - THE1B LTR MaLR -6 358 1 279 278 176 49 chr10 143026271 143026476 -2562812 + MIR SINE MIR 3 233 -29 183 290 108 0 chr10 143027430 143027523 -2561765 - MIR SINE MIR -41 221 119 522 227 9 0 chr10 143027695 143027805 -2561483 - MER3 DNA MER1_type 0 209 99 22 0 0 0 chr10 143027811 143027833 -2561455 + AT_rich Low_complexity Low_complexity 1 22 0 602 38 0 0 chr10 143027833 143027912 -2561376 - L1PA3 LINE L1 0 6155 6077 228 333 11 11 chr10 143027922 143028015 -2561273 - MER3 DNA MER1_type -116 93 1 1852 203 39 47 chr10 143028389 143028896 -2560392 - MLT1D LTR MaLR 0 505 3 330 274 167 37 chr10 143028949 143029194 -2560094 - MLT1H LTR MaLR -12 537 261 269 316 62 46 chr10 143029448 143029700 -2559588 + MIR SINE MIR 5 261 -1 274 331 70 14 chr10 143031510 143031652 -2557636 + L2 LINE L2 3122 3271 -1 488 273 133 0 chr10 143032077 143032242 -2557046 + MER63A DNA MER1_type 5 191 -19 266 304 72 58 chr10 143033258 143033534 -2555754 - L1M4 LINE L1 -3627 2519 2240 1119 256 47 44 chr10 143034490 143034877 -2554411 + MLT1B LTR MaLR 1 388 -2 2187 84 0 34 chr10 143035007 143035327 -2553961 - AluY SINE Alu -2 309 1 1944 164 15 26 chr10 143035369 143035710 -2553578 + MER1B DNA MER1_type 1 337 0 390 289 107 13 chr10 143036183 143036342 -2552946 - MIR SINE MIR -24 238 65 656 151 40 16 chr10 143036932 143037058 -2552230 - MER20 DNA MER1_type -57 162 34 404 272 130 57 chr10 143037486 143037854 -2551434 - MLT1J1 LTR MaLR -51 395 1 2444 66 0 0 chr10 143039307 143039609 -2549679 + AluY SINE Alu 1 302 -9 530 330 105 24 chr10 143040660 143041030 -2548258 + L2 LINE L2 2004 2403 -911 218 297 221 9 chr10 143041007 143041229 -2548059 + L2 LINE L2 3044 3312 -1 * 264 219 176 40 chr10 143042139 143042362 -2546926 + MLT1G LTR MaLR 316 590 0 189 121 0 0 chr10 143043031 143043064 -2546224 + (TG)n Simple_repeat Simple_repeat 1 33 0 2265 57 0 27 chr10 143043169 143043466 -2545822 + AluY SINE Alu 16 304 -7 525 288 149 32 chr10 143043871 143044367 -2544921 + MLT1H1 LTR MaLR 2 555 0 3691 111 0 6 chr10 143046224 143046738 -2542550 + MER9 LTR ERVK 1 511 0 46246 68 11 19 chr10 143046738 143052701 -2536587 + HERVK9 LTR ERVK 1 5916 0 3480 101 32 18 chr10 143052701 143053205 -2536083 + MER9 LTR ERVK 1 511 0 509 278 111 52 chr10 143053873 143054280 -2535008 + MLT1H LTR MaLR 119 549 0 2220 86 13 0 chr10 143054892 143055193 -2534095 + AluY SINE Alu 1 305 -6 206 263 0 68 chr10 143056581 143056771 -2532517 + (CCTG)n Simple_repeat Simple_repeat 3 179 0 779 273 33 60 chr10 143057595 143058114 -2531174 - L1M4c LINE L1 -4543 2416 1921 293 283 0 33 chr10 143058106 143058226 -2531062 - L1M4c LINE L1 -6715 144 29 * 1841 114 0 40 chr10 143058263 143058562 -2530726 - AluSx SINE Alu -3 309 23 242 254 0 32 chr10 143059226 143059289 -2529999 - MLT1J1 LTR MaLR -120 326 266 395 37 0 19 chr10 143060083 143060137 -2529151 + (CA)n Simple_repeat Simple_repeat 2 54 0 308 312 19 32 chr10 143060282 143060439 -2528849 + MER112 DNA MER1_type 3 157 -103 2267 138 88 18 chr10 143061300 143061700 -2527588 - MSTA LTR MaLR 0 428 1 331 361 73 0 chr10 143061794 143061985 -2527303 + L2 LINE L2 1771 1975 -1339 1749 281 154 24 chr10 143062306 143063309 -2525979 - L1MCc LINE L1 -4892 1531 398 480 279 61 5 chr10 143063340 143063537 -2525751 - L1MCc LINE L1 -6193 230 23 1158 213 122 21 chr10 143063806 143064191 -2525097 - MSTC LTR MaLR -4 424 1 2092 110 3 19 chr10 143064714 143065047 -2524241 - AluSq SINE Alu 0 313 1 2198 109 0 10 chr10 143065569 143065880 -2523408 + AluSx SINE Alu 2 309 -3 314 264 40 48 chr10 143065935 143066060 -2523228 + L1M3 LINE L1 3866 3989 -2157 302 303 41 16 chr10 143066197 143066319 -2522969 + L1M3 LINE L1 4219 4343 -1803 941 291 110 42 chr10 143066902 143068146 -2521142 + L1M3 LINE L1 4340 5680 -500 404 241 68 0 chr10 143068189 143068351 -2520937 + L1ME3A LINE L1 5989 6161 -9 593 224 20 0 chr10 143068410 143068562 -2520726 + L1MA10 LINE L1 6177 6331 -3 3808 114 9 18 chr10 143068605 143068984 -2520304 - L1PA16 LINE L1 -6 6160 5779 1986 141 3 0 chr10 143068984 143069283 -2520005 - AluSq SINE Alu -13 300 1 3808 114 9 18 chr10 143069283 143069461 -2519827 - L1PA16 LINE L1 -387 5779 5606 225 0 0 0 chr10 143069461 143069486 -2519802 + (TTA)n Simple_repeat Simple_repeat 3 27 0 3808 114 9 18 chr10 143069486 143069498 -2519790 - L1PA16 LINE L1 -560 5606 5595 39109 30 0 1 chr10 143069498 143071301 -2517987 - L1PA3 LINE L1 -30 6125 4321 2711 23 0 0 chr10 143071301 143071609 -2517679 + AluYb8 SINE Alu 1 308 -10 39109 30 0 1 chr10 143071609 143075173 -2514115 - L1PA3 LINE L1 -1834 4321 765 2451 149 7 5 chr10 143075173 143075785 -2513503 - L1PA16 LINE L1 -563 5603 4988 265 297 0 7 chr10 143075872 143076017 -2513271 + L1ME LINE L1 3117 3260 -2886 565 258 125 45 chr10 143076082 143076531 -2512757 + L1ME LINE L1 4747 5231 -915 503 255 133 31 chr10 143076536 143076660 -2512628 + L1ME LINE L1 5273 5383 -787 8288 58 4 4 chr10 143076660 143077667 -2511621 + LTR13 LTR ERVK 1 1007 0 503 255 133 31 chr10 143077667 143077736 -2511552 + L1ME LINE L1 5383 5444 -726 2462 123 70 2 chr10 143077736 143078135 -2511153 - MSTB LTR MaLR 0 426 1 503 255 133 31 chr10 143078135 143078221 -2511067 + L1ME LINE L1 5444 5584 -586 1525 226 89 6 chr10 143078491 143078849 -2510439 + MSTD LTR MaLR 1 388 -8 1978 210 15 2 chr10 143078855 143079259 -2510029 + MSTD-int LTR MaLR 2 410 -1325 239 250 31 16 chr10 143079630 143079694 -2509594 + MLT1K LTR MaLR 322 386 -202 390 222 33 11 chr10 143079702 143079792 -2509496 + MER96 DNA MER1_type? 1 92 -83 376 252 19 28 chr10 143079810 143079917 -2509371 + MLT1K LTR MaLR 413 518 -70 582 165 21 0 chr10 143080702 143080799 -2508489 + MLT1D LTR MaLR 1 99 -406 780 244 189 0 chr10 143080800 143080843 -2508445 + MLT1D LTR MaLR 216 250 -255 2817 96 3 3 chr10 143080843 143081218 -2508070 - THE1C LTR MaLR 0 375 1 780 244 189 0 chr10 143081218 143081412 -2507876 + MLT1D LTR MaLR 250 498 -7 980 205 32 0 chr10 143083187 143083377 -2505911 - MLT1B LTR MaLR -8 382 187 817 236 26 5 chr10 143083414 143083605 -2505683 - MLT1B LTR MaLR -189 201 7 2367 72 0 0 chr10 143084036 143084329 -2504959 + AluY SINE Alu 2 294 -17 684 232 51 0 chr10 143085081 143085258 -2504030 - L1MB3 LINE L1 0 6183 5998 505 149 11 11 chr10 143086802 143086896 -2502392 + MER53 DNA DNA 96 189 0 313 341 23 0 chr10 143087402 143087531 -2501757 + MIR SINE MIR 16 147 -61 3085 180 7 4 chr10 143087561 143088117 -2501171 + L1MC1 LINE L1 5414 5971 -362 838 129 65 0 chr10 143088125 143088264 -2501024 + L1MC1 LINE L1 6179 6326 -7 315 114 0 0 chr10 143088283 143088327 -2500961 - MLT2D LTR ERVL 0 414 371 706 83 65 12 chr10 143088336 143088504 -2500784 + (TCTA)n Simple_repeat Simple_repeat 4 180 0 1002 26 46 0 chr10 143088546 143088699 -2500589 + (TCTA)n Simple_repeat Simple_repeat 2 161 0 1990 161 24 9 chr10 143088699 143089040 -2500248 - MLT2D LTR ERVL -64 350 5 342 0 0 0 chr10 143089285 143089323 -2499965 + (CA)n Simple_repeat Simple_repeat 1 38 0 303 312 58 0 chr10 143089352 143089506 -2499782 - L1ME4a LINE L1 -226 5895 5733 309 340 35 0 chr10 143089526 143089670 -2499618 - L1ME4a LINE L1 -440 5681 5533 396 281 104 59 chr10 143091514 143091668 -2497620 + MIR SINE MIR 25 193 -69 1123 183 172 79 chr10 143091668 143092023 -2497265 + MLT1B LTR MaLR 1 388 -2 396 281 104 59 chr10 143092023 143092089 -2497199 + MIR SINE MIR 193 255 -7 242 319 30 30 chr10 143093044 143093213 -2496075 - L1MB3 LINE L1 -220 5901 5733 294 228 0 0 chr10 143093922 143094023 -2495265 + (TG)n Simple_repeat Simple_repeat 1 101 0 1576 219 35 33 chr10 143095865 143096321 -2492967 - MLT1C LTR MaLR -5 462 6 262 315 0 0 chr10 143097642 143097715 -2491573 + (TG)n Simple_repeat Simple_repeat 2 74 0 27 29 0 0 chr10 143098287 143098321 -2490967 + AT_rich Low_complexity Low_complexity 1 34 0 812 288 38 46 chr10 143098443 143098790 -2490498 + Charlie7 DNA MER1_type 284 627 -1985 2312 258 72 28 chr10 143098809 143099580 -2489708 - L1ME1 LINE L1 -7 6159 5316 2358 70 0 25 chr10 143099580 143099895 -2489393 + AluY SINE Alu 1 307 -4 2312 258 72 28 chr10 143099895 143100235 -2489053 - L1ME1 LINE L1 -850 5316 4993 2328 215 51 4 chr10 143100663 143101217 -2488071 - L1MD1 LINE L1 0 6242 5666 1902 254 21 35 chr10 143101225 143101800 -2487488 - L1ME1 LINE L1 -5 6230 5664 3085 247 53 21 chr10 143101811 143102729 -2486559 - L1MEc LINE L1 -5421 975 28 1520 280 101 31 chr10 143102721 143103627 -2485661 - L1ME1 LINE L1 -2401 3814 2972 * 2170 113 0 0 chr10 143103627 143103927 -2485361 - AluSx SINE Alu -12 300 1 1520 280 101 31 chr10 143103927 143104474 -2484814 - L1ME1 LINE L1 -3243 2972 397 1736 269 104 27 chr10 143104578 143105135 -2484153 + Charlie7 DNA MER1_type 610 1123 -1489 1915 130 0 0 chr10 143105135 143105412 -2483876 - AluSx SINE Alu -35 277 1 1736 269 104 27 chr10 143105412 143106178 -2483110 + Charlie7 DNA MER1_type 1123 2071 -541 2021 128 3 0 chr10 143108179 143108476 -2480812 + AluJb SINE Alu 1 298 -14 2087 112 0 10 chr10 143108673 143108978 -2480310 + AluSg SINE Alu 1 302 -8 284 0 28 0 chr10 143109018 143109054 -2480234 + (TTA)n Simple_repeat Simple_repeat 2 38 0 1269 282 101 33 chr10 143110180 143110872 -2478416 - MER21B LTR ERV1 -116 747 9 1729 156 3 7 chr10 143111292 143111580 -2477708 - AluJb SINE Alu -25 287 1 5956 61 32 4 chr10 143111638 143112393 -2476895 + LTR17 LTR ERV1 3 778 -2 258 81 0 0 chr10 143112447 143112484 -2476804 + (CA)n Simple_repeat Simple_repeat 1 37 0 579 311 14 14 chr10 143112542 143112754 -2476534 + MER58A DNA MER1_type 6 217 -7 1994 172 56 0 chr10 143113015 143113393 -2475895 + MER57A LTR ERV1 1 399 -4 1880 145 20 46 chr10 143113896 143114247 -2475041 + LTR3b LTR ERVK 159 500 0 1170 87 0 0 chr10 143115578 143116129 -2473159 + (TC)n Simple_repeat Simple_repeat 1 551 0 458 267 139 0 chr10 143116816 143117097 -2472191 - LTR16A LTR ERVL -11 439 120 281 317 14 55 chr10 143117250 143117395 -2471893 - L2 LINE L2 0 3313 3175 237 196 0 0 chr10 143117396 143117447 -2471841 + GA-rich Low_complexity Low_complexity 3 53 0 386 208 13 20 chr10 143118954 143119053 -2470235 + MIR SINE MIR 75 171 -66 1030 259 47 53 chr10 143119392 143119879 -2469409 - MLT1E3 LTR MaLR -36 588 105 834 282 120 14 chr10 143119890 143120308 -2468980 + MLT1C LTR MaLR 6 467 0 195 42 0 0 chr10 143121106 143121130 -2468158 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 6124 51 4 11 chr10 143121132 143121936 -2467352 - L1PA8 LINE L1 -26 6146 5349 308 141 7 30 chr10 143122027 143122099 -2467189 - MLT1J2 LTR MaLR -28 422 303 255 264 54 47 chr10 143122202 143122350 -2466938 - MLT1I LTR MaLR -241 168 20 1018 137 117 95 chr10 143122459 143122734 -2466554 + MLT1A1 LTR MaLR 1 332 -64 1747 162 24 10 chr10 143122734 143123024 -2466264 - AluJb SINE Alu -14 298 5 1018 137 117 95 chr10 143123024 143123091 -2466197 + MLT1A1 LTR MaLR 332 396 0 1012 261 78 26 chr10 143123154 143123580 -2465708 + MLT1C LTR MaLR 10 457 -10 367 301 158 13 chr10 143124451 143124970 -2464318 - L2 LINE L2 -189 3124 2520 402 337 35 18 chr10 143128025 143128194 -2461094 - MIR SINE MIR -83 179 8 291 250 9 26 chr10 143128442 143128558 -2460730 + MLT1H LTR MaLR 124 237 -312 352 285 0 90 chr10 143129498 143129642 -2459646 - L2 LINE L2 -1 3271 3141 24 32 0 0 chr10 143130685 143130716 -2458572 + AT_rich Low_complexity Low_complexity 1 31 0 811 128 5 174 chr10 143130787 143130960 -2458328 + MER5A DNA MER1_type 8 138 -51 1987 156 10 0 chr10 143130960 143131262 -2458026 - AluSx SINE Alu -7 305 1 811 128 5 174 chr10 143131262 143131307 -2457981 + MER5A DNA MER1_type 138 189 0 230 314 9 9 chr10 143131308 143131413 -2457875 - L1M4 LINE L1 -2688 3458 3354 2451 105 6 0 chr10 143131541 143131894 -2457394 - THE1A LTR MaLR 0 355 1 1691 223 37 41 chr10 143132577 143133039 -2456249 + MLT1C LTR MaLR 8 467 0 275 337 20 0 chr10 143133904 143134002 -2455286 - L2 LINE L2 0 3272 3173 673 244 88 49 chr10 143135145 143135580 -2453708 - MLT1C LTR MaLR 0 467 1 319 277 168 19 chr10 143136258 143136514 -2452774 - MLT1J2 LTR MaLR -125 325 32 604 218 85 6 chr10 143136682 143136847 -2452441 + MER45A DNA AcHobo 1 178 0 345 229 12 0 chr10 143138311 143138394 -2450894 + MER103 DNA DNA 62 145 -21 1029 159 0 0 chr10 143139228 143139586 -2449702 + (CCAA)n Simple_repeat Simple_repeat 2 359 0 885 153 2 10 chr10 143139598 143140167 -2449121 + (CCAA)n Simple_repeat Simple_repeat 1 564 0 1403 223 46 59 chr10 143142662 143143101 -2446187 + MLT1C LTR MaLR 1 433 -34 2177 96 50 0 chr10 143143128 143143410 -2445878 - AluSg SINE Alu -12 298 3 424 225 27 9 chr10 143144453 143144564 -2444724 + LTR33 LTR ERVL 400 512 -9 395 308 88 6 chr10 143144636 143144818 -2444470 - LTR33 LTR ERVL -240 281 85 32 0 0 0 chr10 143144915 143144947 -2444341 + AT_rich Low_complexity Low_complexity 1 32 0 674 279 48 18 chr10 143145276 143145548 -2443740 - L2 LINE L2 -698 2616 2337 1315 208 80 80 chr10 143145591 143146067 -2443221 + MLT1H LTR MaLR 39 514 -35 1934 195 12 14 chr10 143146257 143146682 -2442606 - MER74A LTR ERVL -1 557 134 268 140 35 0 chr10 143146682 143146739 -2442549 - MER74A LTR ERVL -366 192 134 * 692 190 149 0 chr10 143146731 143146905 -2442383 - MER74A LTR ERVL -358 200 1 594 291 122 3 chr10 143146925 143147268 -2442020 - L2 LINE L2 -1026 2288 1905 222 379 12 41 chr10 143147338 143147581 -2441707 + L2 LINE L2 3078 3313 0 206 300 0 0 chr10 143147796 143147846 -2441442 + L2 LINE L2 3264 3313 0 371 293 24 37 chr10 143148469 143148633 -2440655 - MLT1I LTR MaLR 0 409 248 434 196 31 0 chr10 143148914 143149011 -2440277 + MER5B DNA MER1_type 79 178 0 1866 97 32 0 chr10 143149132 143149411 -2439877 + MER50 LTR ERV1 1 288 -446 2167 184 92 25 chr10 143149421 143149898 -2439390 + LTR22 LTR ERVK 1 509 0 * 2327 172 21 9 chr10 143149898 143150328 -2438960 + MER50 LTR ERV1 299 733 -1 1538 179 11 11 chr10 143151782 143152061 -2437227 + MER49 LTR ERV1 13 291 -632 4687 46 3 0 chr10 143152096 143152685 -2436603 - LTR10C LTR ERV1 0 591 1 1558 182 13 67 chr10 143152692 143152764 -2436524 + MER4D LTR ERV1 549 623 -280 2519 69 3 66 chr10 143152764 143153001 -2436287 + THE1A LTR MaLR 1 207 -148 2413 100 0 3 chr10 143153001 143153311 -2435977 + AluSc SINE Alu 1 309 0 2519 69 3 66 chr10 143153311 143153452 -2435836 + THE1A LTR MaLR 207 355 0 1558 182 13 67 chr10 143153452 143153557 -2435731 + MER4D LTR ERV1 623 732 -171 3758 197 32 9 chr10 143153557 143154364 -2434924 - LTR1B LTR ERV1 0 826 1 1558 182 13 67 chr10 143154364 143154558 -2434730 + MER4D LTR ERV1 732 901 -2 409 308 93 17 chr10 143154658 143154830 -2434458 - MIR3 SINE MIR -17 191 7 1576 175 8 0 chr10 143155219 143155487 -2433801 - LTR39 LTR ERV1 -2 781 512 244 289 0 0 chr10 143155495 143155585 -2433703 + L1MC4 LINE L1 6614 6703 -1339 1364 183 12 8 chr10 143155596 143155837 -2433451 - AluSx SINE Alu -17 295 54 3184 132 27 10 chr10 143155837 143156351 -2432937 - LTR39 LTR ERV1 -260 523 1 279 239 0 30 chr10 143157454 143157521 -2431767 - MER81 DNA DNA -27 87 23 866 231 17 22 chr10 143159515 143159746 -2429542 - MSTD LTR MaLR 0 396 196 864 156 0 0 chr10 143159772 143159952 -2429336 + GA-rich Low_complexity Low_complexity 1 180 0 537 286 0 7 chr10 143159978 143160118 -2429170 - MSTD LTR MaLR -257 139 1 3579 250 26 31 chr10 143160898 143162298 -2426990 + L1MEc LINE L1 2087 3436 -2779 342 276 135 0 chr10 143162323 143162479 -2426809 + MIR SINE MIR 86 262 0 314 355 51 14 chr10 143162751 143162889 -2426399 - MIR SINE MIR -30 232 90 1669 176 7 24 chr10 143162890 143163180 -2426108 + AluJb SINE Alu 1 285 -27 204 53 0 53 chr10 143163180 143163218 -2426070 + (CAAA)n Simple_repeat Simple_repeat 2 180 0 2185 96 3 0 chr10 143163955 143164257 -2425031 + AluSp SINE Alu 11 313 0 186 220 20 0 chr10 143164270 143164320 -2424968 - L2 LINE L2 -945 2369 2319 578 320 66 19 chr10 143165440 143165699 -2423589 - MLT1K LTR MaLR -305 283 13 1635 194 31 111 chr10 143165780 143166232 -2423056 - MLT1D LTR MaLR 0 505 101 2031 122 3 7 chr10 143166232 143166535 -2422753 + AluSx SINE Alu 1 302 -10 1635 194 31 111 chr10 143166535 143166622 -2422666 - MLT1D LTR MaLR -404 101 9 185 147 59 0 chr10 143166640 143166674 -2422614 - L2 LINE L2 -35 3278 3243 226 221 124 53 chr10 143167181 143167294 -2421994 - MIR SINE MIR -70 192 72 627 199 7 20 chr10 143167368 143167514 -2421774 - L1MA7 LINE L1 -289 6002 5859 809 176 34 14 chr10 143168066 143168214 -2421074 - MLT1D LTR MaLR -351 154 4 2851 260 86 21 chr10 143168221 143168277 -2421011 - L1MEc LINE L1 -3270 2945 2894 2349 73 0 3 chr10 143168277 143168579 -2420709 - AluY SINE Alu -10 301 1 2851 260 86 21 chr10 143168579 143170200 -2419088 - L1MEc LINE L1 -3321 2894 1220 1909 225 14 10 chr10 143170391 143170889 -2418399 - L1MEc LINE L1 -5225 1171 672 1368 208 10 24 chr10 143171106 143171394 -2417894 - L1MEc LINE L1 -5771 625 342 659 240 10 83 chr10 143171646 143171850 -2417438 - L1MEc LINE L1 -5864 532 344 347 292 26 18 chr10 143172340 143172453 -2416835 - L1MEc LINE L1 -6016 380 267 241 430 46 10 chr10 143172680 143172985 -2416303 - L3 LINE CR1 -383 1194 879 222 37 0 0 chr10 143173906 143173933 -2415355 + (TG)n Simple_repeat Simple_repeat 2 28 0 237 213 120 27 chr10 143175379 143175454 -2413834 - MLT1K LTR MaLR -15 573 492 478 313 67 64 chr10 143175492 143175821 -2413467 - MLT1K LTR MaLR -183 405 76 199 163 163 0 chr10 143175878 143175927 -2413361 + L2 LINE L2 3257 3313 0 229 225 0 0 chr10 143175960 143176000 -2413288 - MLT2C1 LTR ERVL -8 389 350 301 175 0 35 chr10 143176025 143176082 -2413206 + L1MC4 LINE L1 6649 6703 -1339 262 283 0 22 chr10 143176084 143176176 -2413112 + L1MC4 LINE L1 6614 6703 -1339 231 286 0 0 chr10 143176176 143176232 -2413056 + (TATG)n Simple_repeat Simple_repeat 4 59 0 1042 231 61 80 chr10 143176232 143176626 -2412662 - MLT2B1 LTR ERVL -40 480 1 663 194 19 39 chr10 143178370 143178525 -2410763 + Charlie4a DNA MER1_type 26 177 -331 864 230 35 19 chr10 143178624 143178881 -2410407 + Charlie4a DNA MER1_type 195 455 -53 1537 216 79 34 chr10 143179737 143180154 -2409134 + MLT1C LTR MaLR 23 458 -9 189 278 37 0 chr10 143182159 143182213 -2407075 + L2 LINE L2 3216 3271 -1 307 282 61 92 chr10 143185439 143185602 -2403686 + MIR SINE MIR 103 260 -2 2170 97 0 3 chr10 143187211 143187511 -2401777 + AluSq SINE Alu 1 299 -14 1834 136 176 16 chr10 143188817 143189186 -2400102 - MSTA LTR MaLR 0 428 1 377 20 20 0 chr10 143189286 143189336 -2399952 + (TG)n Simple_repeat Simple_repeat 1 51 0 25 0 0 0 chr10 143189461 143189486 -2399802 + AT_rich Low_complexity Low_complexity 1 25 0 648 235 63 120 chr10 143190422 143190771 -2398517 + MLT1C LTR MaLR 62 390 0 4917 143 51 19 chr10 143191007 143191193 -2398095 - L1MC1 LINE L1 -11 6322 6143 1564 213 69 16 chr10 143191193 143191569 -2397719 - MSTD LTR MaLR 0 396 1 4917 143 51 19 chr10 143191569 143192033 -2397255 - L1MC1 LINE L1 -190 6143 5634 2708 139 29 0 chr10 143192033 143192449 -2396839 + MSTA LTR MaLR 1 428 0 4917 143 51 19 chr10 143192449 143192677 -2396611 - L1MC1 LINE L1 -699 5634 5415 1407 237 87 54 chr10 143196339 143196824 -2392464 + MLT1D LTR MaLR 5 505 0 404 204 58 0 chr10 143197476 143197579 -2391709 + MIR3 SINE MIR 85 193 -15 296 317 10 0 chr10 143199419 143199520 -2389768 - L1ME3 LINE L1 -1 6161 6060 6295 265 78 29 chr10 143199525 143203085 -2386203 - L1MCc LINE L1 -956 5985 2272 275 243 104 12 chr10 143203093 143203266 -2386022 - L1M4 LINE L1 -2744 3402 3214 2101 215 62 4 chr10 143203278 143203775 -2385513 - L1MA9 LINE L1 -33 6279 5754 204 148 49 0 chr10 143203775 143203836 -2385452 + (TCTA)n Simple_repeat Simple_repeat 3 66 0 3001 174 5 22 chr10 143203836 143204648 -2384640 - L1M2 LINE L1 -519 5793 4996 796 182 32 11 chr10 143204644 143204831 -2384457 - L1M2 LINE L1 -1433 4713 4523 * 620 267 67 70 chr10 143204850 143205673 -2383615 - L1MCc LINE L1 -4921 2201 1163 222 176 0 0 chr10 143206540 143206591 -2382697 + GA-rich Low_complexity Low_complexity 1 51 0 210 261 46 76 chr10 143206799 143206885 -2382403 + MER5A DNA MER1_type 82 155 -23 1977 115 21 0 chr10 143207425 143207713 -2381575 - AluSx SINE Alu -18 294 1 372 354 19 12 chr10 143207856 143208017 -2381271 + L2 LINE L2 1218 1379 -1935 264 362 43 32 chr10 143208459 143208647 -2380641 + MIR SINE MIR 6 195 -67 2854 70 13 0 chr10 143212854 143213226 -2376062 + L1PA10 LINE L1 5792 6168 0 1941 115 0 48 chr10 143213495 143213525 -2375763 - AluSg SINE Alu 0 310 280 307 0 0 0 chr10 143213525 143213559 -2375729 + (TTTTG)n Simple_repeat Simple_repeat 2 140 0 1941 115 0 48 chr10 143213559 143213823 -2375465 - AluSg SINE Alu -30 280 17 1597 221 86 28 chr10 143214366 143214910 -2374378 + L1MA9 LINE L1 5732 6312 0 363 305 0 0 chr10 143215149 143215254 -2374034 + G-rich Low_complexity Low_complexity 3 107 0 2487 65 0 13 chr10 143216224 143216534 -2372754 + AluY SINE Alu 1 306 -5 214 335 123 8 chr10 143217144 143217404 -2371884 - L2 LINE L2 -685 2629 2340 2419 251 56 44 chr10 143217492 143218612 -2370676 - L1MEc LINE L1 -2963 3252 2169 497 235 0 7 chr10 143220999 143221148 -2368140 + (TG)n Simple_repeat Simple_repeat 2 149 0 184 182 23 23 chr10 143221912 143221956 -2367332 + L2 LINE L2 3229 3272 0 275 230 62 80 chr10 143222284 143222397 -2366891 + L1MC3 LINE L1 6716 6826 -959 2355 101 16 0 chr10 143225302 143225608 -2363680 + AluSx SINE Alu 1 311 -1 1046 237 73 9 chr10 143226783 143227100 -2362188 - MLT1A1 LTR MaLR -15 350 14 908 205 133 0 chr10 143227808 143228042 -2361246 - MER68 LTR ERV1 -296 266 2 752 11 21 0 chr10 143228152 143228245 -2361043 - L1PA4 LINE L1 0 6155 6061 522 292 41 28 chr10 143230489 143230724 -2358564 + MIR SINE MIR 15 253 -9 230 154 0 0 chr10 143232238 143232277 -2357011 - MLT1K LTR MaLR -4 584 546 886 225 97 72 chr10 143235014 143235445 -2353843 - MLT1C LTR MaLR -25 442 1 183 42 0 0 chr10 143235690 143235714 -2353574 + (CCCCCA)n Simple_repeat Simple_repeat 4 27 0 699 217 84 19 chr10 143236248 143236635 -2352653 - MLT1C LTR MaLR -8 459 6 4635 92 6 14 chr10 143236925 143237292 -2351996 - PABL_A LTR ERV1 -1 659 298 1495 194 42 93 chr10 143237292 143237766 -2351522 + LTR7 LTR ERV1 1 450 0 4635 92 6 14 chr10 143237766 143238062 -2351226 - PABL_A LTR ERV1 -362 298 1 458 278 80 23 chr10 143239225 143239558 -2349730 + L1MC4 LINE L1 6680 7027 -781 544 303 72 14 chr10 143240834 143241042 -2348246 + MIR SINE MIR 18 237 -25 2762 157 11 94 chr10 143241061 143241717 -2347571 - LTR18B LTR ERVL -13 601 1 2299 123 0 0 chr10 143243319 143243619 -2345669 - AluSx SINE Alu -12 300 1 821 278 111 23 chr10 143243835 143244320 -2344968 - HAL1b LINE L1 -250 1098 571 915 259 21 56 chr10 143244476 143244854 -2344434 - HAL1b LINE L1 -718 630 266 239 236 0 18 chr10 143245338 143245393 -2343895 + CT-rich Low_complexity Low_complexity 1 54 0 526 243 128 0 chr10 143245446 143245594 -2343694 + MER5B DNA MER1_type 7 173 -5 256 348 33 0 chr10 143248402 143248494 -2340794 - MIR SINE MIR -5 257 163 400 367 0 0 chr10 143249085 143249243 -2340045 + (TG)n Simple_repeat Simple_repeat 1 158 0 229 175 62 62 chr10 143250099 143250179 -2339109 - MLT1C LTR MaLR -380 87 8 313 288 12 0 chr10 143250264 143250344 -2338944 - MER81 DNA DNA 0 114 34 385 289 113 42 chr10 143250532 143250965 -2338323 - L1ME3A LINE L1 -205 5948 5485 309 341 23 26 chr10 143251079 143251381 -2337907 - L1ME3A LINE L1 -1446 4683 4383 639 271 31 5 chr10 143251404 143251596 -2337692 + MLT1F1 LTR MaLR 2 198 -369 253 250 109 0 chr10 143251629 143251693 -2337595 + MLT1F1 LTR MaLR 177 247 -320 410 271 80 0 chr10 143251751 143251902 -2337386 - L1ME3A LINE L1 -2358 3771 3609 262 313 0 31 chr10 143251899 143251995 -2337293 - L1ME3A LINE L1 -5084 1035 943 * 2770 163 32 72 chr10 143251986 143252635 -2336653 - L1MD1 LINE L1 -1 6241 5619 3924 254 42 24 chr10 143252646 143253457 -2335831 - L1MCa LINE L1 -2629 3911 3064 556 172 0 11 chr10 143253457 143253550 -2335738 + HY4 scRNA scRNA 2 93 0 3924 254 42 24 chr10 143253550 143254137 -2335151 - L1MCa LINE L1 -3476 3064 2489 1450 221 49 6 chr10 143254659 143255007 -2334281 - MLT1A1 LTR MaLR -2 363 1 302 196 53 105 chr10 143256295 143256428 -2332860 + MER5A DNA MER1_type 64 189 0 443 317 30 18 chr10 143256570 143256737 -2332551 - MER5B DNA MER1_type -4 174 6 1334 78 161 21 chr10 143257279 143257521 -2331767 + LTR9 LTR ERV1 1 276 -336 2088 129 57 11 chr10 143257831 143258180 -2331108 + LTR9 LTR ERV1 246 610 -2 505 293 39 70 chr10 143258537 143258793 -2330495 + MIR SINE MIR 2 249 -13 245 260 48 10 chr10 143258931 143259035 -2330253 + L1ME LINE L1 176 283 -5922 531 330 57 18 chr10 143259162 143259389 -2329899 + L1ME LINE L1 2014 2249 -4147 347 308 71 49 chr10 143259663 143260643 -2328645 + L1MC4a LINE L1 811 1818 -4578 521 241 43 7 chr10 143260794 143260935 -2328353 + L1MC4a LINE L1 3140 3285 -2930 747 316 109 25 chr10 143261052 143261178 -2328110 + L1MC4a LINE L1 3440 3554 -2661 203 0 37 0 chr10 143261178 143261205 -2328083 + (CA)n Simple_repeat Simple_repeat 2 29 0 747 316 109 25 chr10 143261205 143261911 -2327377 + L1MC4a LINE L1 3554 4342 -1873 1714 124 18 0 chr10 143261916 143262190 -2327098 + MLT2A2 LTR ERVL 1 279 -174 2366 112 0 0 chr10 143262771 143263083 -2326205 - AluSx SINE Alu 0 312 1 1970 235 44 39 chr10 143264503 143265068 -2324220 - L1MCa LINE L1 -5972 568 1 253 332 88 32 chr10 143265258 143265508 -2323780 - L1MEd LINE L1 -5457 662 399 238 331 83 30 chr10 143267769 143267902 -2321386 - L2 LINE L2 -1 3271 3132 405 289 134 0 chr10 143268339 143268488 -2320800 + MIR SINE MIR 77 245 -17 252 0 0 0 chr10 143269240 143269268 -2320020 + (TG)n Simple_repeat Simple_repeat 2 29 0 1147 153 39 18 chr10 143269499 143269762 -2319526 + MLT2A2 LTR ERVL 283 453 0 446 244 146 0 chr10 143269867 143270031 -2319257 + L1MC4a LINE L1 4864 5051 -1164 250 322 8 8 chr10 143270094 143270212 -2319076 + L1MC4a LINE L1 5192 5309 -906 188 318 23 0 chr10 143272117 143272205 -2317083 + MIR3 SINE MIR 113 202 -6 1297 319 80 64 chr10 143272844 143273878 -2315410 + L1M4 LINE L1 2111 3161 -2985 2072 99 31 3 chr10 143273981 143274274 -2315014 + AluSq SINE Alu 1 301 -12 308 366 40 5 chr10 143274296 143274520 -2314768 + L1M4 LINE L1 3899 4130 -2016 2986 232 52 81 chr10 143274521 143274999 -2314289 + L1MC4a LINE L1 5425 5915 -1962 1987 108 0 4 chr10 143274999 143275310 -2313978 + AluSx SINE Alu 5 314 0 2986 232 52 81 chr10 143275310 143275835 -2313453 + L1MC4a LINE L1 5915 6387 -1490 1954 180 15 0 chr10 143275835 143276174 -2313114 + MER2 DNA MER2_type 1 344 0 2986 232 52 81 chr10 143276174 143276445 -2312843 + L1MC4a LINE L1 6387 6664 -1213 260 356 164 0 chr10 143276616 143276793 -2312495 + MIR SINE MIR 19 224 -38 2113 113 0 3 chr10 143277439 143277739 -2311549 + AluSx SINE Alu 1 299 -13 4648 93 9 15 chr10 143277931 143278044 -2311244 - L1PA13 LINE L1 -11 6152 6040 1755 110 71 151 chr10 143278044 143278509 -2310779 - MSTA LTR MaLR 0 428 1 4648 93 9 15 chr10 143278509 143278944 -2310344 - L1PA13 LINE L1 -123 6040 5606 1763 159 0 17 chr10 143278944 143279277 -2310011 - AluSx SINE Alu 0 312 5 4648 93 9 15 chr10 143279277 143279391 -2309897 - L1PA13 LINE L1 -557 5606 5493 3767 224 43 30 chr10 143279509 143281414 -2307874 - L1ME1 LINE L1 -3 6232 4316 2633 257 101 22 chr10 143281410 143281689 -2307599 - L1ME1 LINE L1 -3704 2523 2268 * 1937 121 87 34 chr10 143281689 143282045 -2307243 - THE1C LTR MaLR 0 375 1 2633 257 101 22 chr10 143282045 143282540 -2306748 - L1ME1 LINE L1 -3959 2268 1814 6996 68 5 0 chr10 143282540 143284119 -2305169 + L1PA7 LINE L1 4572 6154 0 2633 257 101 22 chr10 143284119 143284629 -2304659 - L1ME1 LINE L1 -4413 1814 1166 508 293 162 30 chr10 143284633 143284930 -2304358 - L1ME4a LINE L1 -295 5895 5560 252 0 0 0 chr10 143284976 143285004 -2304284 + (TG)n Simple_repeat Simple_repeat 1 28 0 2098 107 3 0 chr10 143285242 143285533 -2303755 - AluSq SINE Alu -21 292 1 2019 199 6 3 chr10 143285969 143286325 -2302963 - MLT1A1 LTR MaLR -8 357 1 313 363 103 30 chr10 143286344 143286812 -2302476 - L1ME4a LINE L1 -2173 4042 3541 436 277 195 59 chr10 143287277 143288217 -2301071 - L1MEc LINE L1 -2993 3222 828 236 317 176 0 chr10 143291045 143291187 -2298101 - MIR SINE MIR -73 189 23 182 309 0 53 chr10 143293437 143293531 -2295757 - L2 LINE L2 -168 3104 3016 443 179 21 79 chr10 143293531 143293671 -2295617 - AluSg/x SINE Alu -2 310 179 21 0 0 0 chr10 143293755 143293776 -2295512 + AT_rich Low_complexity Low_complexity 1 21 0 323 23 23 0 chr10 143294179 143294223 -2295065 + (GGAA)n Simple_repeat Simple_repeat 4 48 0 1505 156 123 27 chr10 143295073 143295406 -2293882 + MLT1A1 LTR MaLR 1 365 0 1573 241 21 3 chr10 143295432 143295813 -2293475 + L1MA9 LINE L1 4883 5270 -876 426 340 36 38 chr10 143295854 143296409 -2292879 + L1MD3 LINE L1 5423 5976 -2019 * 3022 199 70 20 chr10 143295926 143296665 -2292623 + L1MA9 LINE L1 5495 6270 -42 1271 197 110 82 chr10 143297488 143297986 -2291302 - MLT2B2 LTR ERVL -3 512 1 197 229 229 38 chr10 143299292 143299370 -2289918 - L2 LINE L2 -1 3271 3209 3544 105 35 25 chr10 143299370 143299892 -2289396 - MER1A DNA MER1_type 0 527 1 197 229 229 38 chr10 143299892 143299918 -2289370 - L2 LINE L2 -63 3209 3147 356 153 0 0 chr10 143300761 143300820 -2288468 + L1MA5A LINE L1 6236 6294 -3 250 311 46 60 chr10 143301622 143301773 -2287515 - MIR SINE MIR -90 172 24 2242 153 30 37 chr10 143302665 143303096 -2286192 + MSTC LTR MaLR 1 428 0 401 286 19 39 chr10 143303588 143303742 -2285546 - MLT1J2 LTR MaLR -20 430 280 235 176 20 0 chr10 143303813 143303864 -2285424 - MLT1J1 LTR MaLR -107 339 288 258 212 59 47 chr10 143303914 143303999 -2285289 - MLT1J1 LTR MaLR -73 373 288 254 255 35 22 chr10 143304049 143304147 -2285141 - MLT1J1 LTR MaLR -71 379 280 381 267 120 39 chr10 143308263 143308521 -2280767 + Charlie2 DNA MER1_type 1856 2134 -728 1822 124 0 67 chr10 143308534 143308848 -2280440 + AluSx SINE Alu 1 293 -19 474 219 27 7 chr10 143308850 143308989 -2280299 + Charlie2 DNA MER1_type 2638 2779 -83 1039 193 95 38 chr10 143308989 143309330 -2279958 - MSTD LTR MaLR 0 396 1 2285 210 19 2 chr10 143309517 143309988 -2279300 - L1MC3 LINE L1 -8 7777 7299 328 167 56 8 chr10 143310146 143310272 -2279016 + (TG)n Simple_repeat Simple_repeat 2 133 0 465 78 49 10 chr10 143310334 143310436 -2278852 + (TG)n Simple_repeat Simple_repeat 1 106 0 216 0 0 0 chr10 143311853 143311877 -2277411 + (TG)n Simple_repeat Simple_repeat 1 24 0 843 65 16 8 chr10 143312359 143312483 -2276805 + AluY SINE Alu 187 311 0 2245 99 3 3 chr10 143313658 143313991 -2275297 - AluSx SINE Alu 0 333 1 314 333 53 15 chr10 143314546 143314678 -2274610 - L2 LINE L2 0 3272 3136 2225 96 0 30 chr10 143315558 143315860 -2273428 - AluSg SINE Alu -17 293 1 201 318 45 23 chr10 143315933 143316021 -2273267 - MIR3 SINE MIR -23 185 96 1776 227 30 28 chr10 143317106 143317565 -2271723 + MER65C LTR ERV1 1 460 -1 351 291 28 71 chr10 143320821 143321075 -2268213 + L2 LINE L2 1752 1994 -1320 273 323 84 30 chr10 143321259 143321556 -2267732 + L2 LINE L2 2059 2371 -943 206 336 89 62 chr10 143321946 143322363 -2266925 + L2 LINE L2 2820 3247 -25 201 364 30 0 chr10 143323420 143323519 -2265769 - MIR SINE MIR -160 102 1 2326 107 0 0 chr10 143324200 143324508 -2264780 - AluSx SINE Alu -4 308 1 324 329 44 22 chr10 143325954 143326091 -2263197 + MIR SINE MIR 14 153 -109 439 269 96 106 chr10 143328222 143328494 -2260794 - L1ME3 LINE L1 -224 5938 5665 233 152 0 0 chr10 143328494 143328540 -2260748 - LTR66 LTR ERVL -171 439 394 * 269 146 0 0 chr10 143328502 143328550 -2260738 + LTR66 LTR ERVL 394 441 -169 * 439 269 96 106 chr10 143328540 143328555 -2260733 - L1ME3 LINE L1 -497 5665 5651 315 0 0 0 chr10 143328555 143328590 -2260698 + (TG)n Simple_repeat Simple_repeat 2 36 0 439 269 96 106 chr10 143328590 143328936 -2260352 - L1ME3 LINE L1 -511 5651 5266 318 265 110 0 chr10 143328991 143329127 -2260161 - L1ME3 LINE L1 -954 5192 5042 243 88 0 0 chr10 143329127 143329161 -2260127 + (TTCC)n Simple_repeat Simple_repeat 2 35 0 2255 98 0 3 chr10 143329168 143329464 -2259824 - AluSg SINE Alu -14 296 2 2101 145 0 0 chr10 143329467 143329771 -2259517 - AluSx SINE Alu -8 304 1 760 266 75 63 chr10 143329890 143330318 -2258970 - L1ME3A LINE L1 -340 5813 5381 * 1214 218 63 4 chr10 143330317 143330604 -2258684 - L1MB5 LINE L1 -59 6115 5801 1471 302 121 18 chr10 143330778 143331751 -2257537 - L1ME3A LINE L1 -896 5233 4160 971 261 119 68 chr10 143332354 143332496 -2256792 - L1MEd LINE L1 -4787 1344 1211 1773 157 3 46 chr10 143332496 143332801 -2256487 - AluSx SINE Alu -19 293 2 971 261 119 68 chr10 143332801 143333735 -2255553 - L1MEd LINE L1 -4920 1211 332 692 277 134 80 chr10 143333947 143334358 -2254930 + MLT2E LTR ERVL 1 433 -195 208 266 62 16 chr10 143334969 143335033 -2254255 - L3 LINE CR1 -6 1571 1505 195 384 23 0 chr10 143336384 143336470 -2252818 + L2 LINE L2 2664 2751 -563 2863 208 50 27 chr10 143336506 143337068 -2252220 - L1MB8 LINE L1 0 6178 5630 1991 129 70 20 chr10 143337068 143337425 -2251863 - THE1C LTR MaLR 0 375 1 2863 208 50 27 chr10 143337425 143337548 -2251740 - L1MB8 LINE L1 -548 5630 5511 2370 101 7 0 chr10 143337548 143337856 -2251432 + AluSg SINE Alu 1 310 0 2863 208 50 27 chr10 143337856 143338100 -2251188 - L1MB8 LINE L1 -667 5511 5200 2203 224 64 21 chr10 143338073 143338299 -2250989 - L1MB8 LINE L1 -1250 4896 4681 * 5879 132 14 4 chr10 143338299 143339815 -2249473 + L1PA13 LINE L1 4638 6163 0 2203 224 64 21 chr10 143339815 143340196 -2249092 - L1MB8 LINE L1 -1465 4681 4263 * 7656 255 67 40 chr10 143340192 143340434 -2248854 - L1ME1 LINE L1 -28 6207 5973 2130 124 0 0 chr10 143340434 143340733 -2248555 - AluSc SINE Alu -10 299 1 7656 255 67 40 chr10 143340733 143341037 -2248251 - L1ME1 LINE L1 -262 5973 5679 1803 140 0 4 chr10 143341037 143341301 -2247987 + AluSq SINE Alu 46 308 -5 7656 255 67 40 chr10 143341301 143343335 -2245953 - L1ME1 LINE L1 -556 5679 3701 2551 46 0 7 chr10 143343335 143343642 -2245646 - AluY SINE Alu -6 305 1 7656 255 67 40 chr10 143343642 143344037 -2245251 - L1ME1 LINE L1 -2534 3701 3318 2040 112 3 0 chr10 143344037 143344322 -2244966 - AluSx SINE Alu -22 290 5 7656 255 67 40 chr10 143344322 143346686 -2242602 - L1ME1 LINE L1 -2917 3318 762 8861 156 19 9 chr10 143346705 143347361 -2241927 - L1MA3 LINE L1 -17 6288 5640 2164 131 16 49 chr10 143347361 143347749 -2241539 - THE1C LTR MaLR 0 375 1 8861 156 19 9 chr10 143347749 143349656 -2239632 - L1MA3 LINE L1 -665 5640 3695 1674 289 50 32 chr10 143349651 143350346 -2238942 - L1ME1 LINE L1 -5624 772 65 * 249 263 105 72 chr10 143352589 143352798 -2236490 - L1MC/D LINE L1 -2291 5451 5236 379 319 167 32 chr10 143353487 143353769 -2235519 + L2 LINE L2 2994 3313 0 269 118 20 0 chr10 143355095 143355146 -2234142 + (TTCA)n Simple_repeat Simple_repeat 2 53 0 333 354 122 22 chr10 143356546 143356775 -2232513 - L1MC/D LINE L1 -2044 5764 5513 578 271 19 61 chr10 143356790 143357004 -2232284 - MER63A DNA MER1_type -1 209 5 2727 262 86 39 chr10 143357710 143359411 -2229877 - L1ME LINE L1 -2695 3385 1645 1592 193 62 3 chr10 143359414 143359735 -2229553 + MER2 DNA MER2_type 1 340 -5 1004 299 100 35 chr10 143359743 143360079 -2229209 - L1ME LINE L1 -4542 1538 1225 2275 92 3 7 chr10 143360079 143360374 -2228914 - AluSx SINE Alu -17 295 2 1004 299 100 35 chr10 143360374 143361038 -2228250 - L1ME LINE L1 -4855 1225 496 22 35 0 0 chr10 143361123 143361152 -2228136 + AT_rich Low_complexity Low_complexity 1 29 0 286 309 33 40 chr10 143361218 143361370 -2227918 - L1ME LINE L1 -5665 405 255 329 296 7 59 chr10 143361735 143361870 -2227418 - L1ME LINE L1 -5887 183 56 334 291 107 30 chr10 143361956 143362190 -2227098 - L1M4 LINE L1 -1979 4167 3916 251 332 55 18 chr10 143362619 143362826 -2226462 - L1 LINE L1 -1088 5058 4843 333 291 0 0 chr10 143363269 143363348 -2225940 + MER21B LTR ERV1 12 90 -773 2063 194 155 74 chr10 143363440 143364194 -2225094 + MER21B LTR ERV1 49 863 0 22 35 0 0 chr10 143364225 143364254 -2225034 + AT_rich Low_complexity Low_complexity 1 29 0 468 288 112 52 chr10 143364254 143364639 -2224649 - L1 LINE L1 -2150 3996 3589 253 272 44 44 chr10 143365002 143365138 -2224150 - L1MC/D LINE L1 -1903 5905 5770 384 248 17 17 chr10 143365285 143365402 -2223886 - L2 LINE L2 0 3272 3156 2564 67 3 3 chr10 143365891 143366204 -2223084 - AluSp SINE Alu 0 313 1 278 46 7 50 chr10 143366170 143366228 -2223060 - AluY SINE Alu -266 34 1 425 318 117 14 chr10 143366667 143366881 -2222407 - MIR SINE MIR -14 248 13 246 286 199 63 chr10 143367923 143368210 -2221078 - L3 LINE CR1 -179 1398 1073 244 241 221 35 chr10 143368355 143368500 -2220788 - L3 LINE CR1 -599 978 807 181 283 28 66 chr10 143368576 143368682 -2220606 - MIR SINE MIR -57 205 104 188 279 0 0 chr10 143370261 143370304 -2218984 + L2 LINE L2 3020 3062 -210 830 238 32 167 chr10 143370553 143371117 -2218171 + L1M4 LINE L1 3544 4032 -2114 667 256 88 24 chr10 143371141 143371423 -2217865 + MER54A LTR ERVL 101 557 -260 467 246 48 0 chr10 143371645 143371771 -2217517 + L1M4 LINE L1 4036 4167 -1979 222 222 0 0 chr10 143371772 143371826 -2217462 + A-rich Low_complexity Low_complexity 1 54 0 2277 86 3 0 chr10 143371844 143372146 -2217142 + AluSq SINE Alu 1 303 -10 323 209 0 0 chr10 143372150 143372217 -2217071 + L1M4 LINE L1 4189 4255 -1891 * 481 273 71 64 chr10 143372193 143372780 -2216508 + L1ME3A LINE L1 770 1392 -4883 229 320 68 0 chr10 143372860 143372963 -2216325 + L1ME3A LINE L1 1372 1481 -4650 226 288 25 0 chr10 143373291 143373371 -2215917 + L1ME3A LINE L1 4734 4815 -1314 537 259 122 24 chr10 143373481 143373772 -2215516 + L1ME3A LINE L1 5335 5596 -549 7572 72 6 0 chr10 143373772 143374735 -2214553 + LTR5 LTR ERVK 1 969 0 537 259 122 24 chr10 143374735 143374966 -2214322 + L1ME3A LINE L1 5596 5965 -180 314 319 83 33 chr10 143374969 143375152 -2214136 + L1ME3A LINE L1 5915 6100 -49 2481 159 16 2 chr10 143375190 143375675 -2213613 - L1 LINE L1 -1384 4762 4271 1814 150 9 12 chr10 143375659 143375998 -2213290 + L1MA3 LINE L1 5739 6076 -229 * 181 54 0 54 chr10 143376017 143376054 -2213234 + (TTTTG)n Simple_repeat Simple_repeat 4 38 0 1111 103 0 0 chr10 143376055 143376201 -2213087 - MER107 DNA MER1_type -51 146 1 1008 209 4 13 chr10 143376202 143376436 -2212852 + L1MA4 LINE L1 6069 6300 0 302 331 8 15 chr10 143377966 143378099 -2211189 + (CATATA)n Simple_repeat Simple_repeat 5 136 0 5172 148 10 44 chr10 143378920 143379852 -2209436 - MER4D LTR ERV1 -1 902 3 4153 152 20 21 chr10 143380251 143380961 -2208327 + LTR62 LTR ERVK 7 715 -4 371 297 76 43 chr10 143381270 143381455 -2207833 + MER20B DNA MER1_type 6 196 -587 436 236 16 0 chr10 143382572 143382695 -2206593 - L1MC4 LINE L1 0 8042 7918 1429 257 52 55 chr10 143382755 143383334 -2205954 - L1MC4a LINE L1 -846 6962 6386 2383 313 60 30 chr10 143383365 143384354 -2204934 + L1MEc LINE L1 81 1040 -5356 207 69 0 0 chr10 143384354 143384383 -2204905 + (CA)n Simple_repeat Simple_repeat 2 30 0 2383 313 60 30 chr10 143384383 143384754 -2204534 + L1MEc LINE L1 1040 1492 -4904 1772 184 88 10 chr10 143384754 143385151 -2204137 - MSTB1 LTR MaLR 0 432 5 2383 313 60 30 chr10 143385151 143385302 -2203986 + L1MEc LINE L1 1492 1637 -4759 1329 279 76 57 chr10 143385306 143385712 -2203576 + L1ME1 LINE L1 5 433 -5637 2080 142 119 35 chr10 143385712 143386107 -2203181 - MSTA LTR MaLR 0 428 1 1329 279 76 57 chr10 143386107 143386467 -2202821 + L1ME1 LINE L1 433 785 -5285 * 3682 214 180 43 chr10 143386420 143386513 -2202775 - L1MCa LINE L1 -4444 1982 1903 2121 118 3 0 chr10 143386513 143386809 -2202479 - AluSp SINE Alu -11 302 6 3682 214 180 43 chr10 143386809 143388189 -2201099 - L1MCa LINE L1 -4523 1903 308 521 273 112 89 chr10 143388210 143389006 -2200282 + L1ME1 LINE L1 797 1610 -4470 451 237 79 7 chr10 143389011 143389150 -2200138 + L1MC3 LINE L1 6067 6215 -1570 3351 141 50 6 chr10 143389155 143389741 -2199547 - LTR38B LTR ERV1 0 611 3 605 210 76 170 chr10 143389744 143390167 -2199121 + L1MC3 LINE L1 6235 6617 -1191 566 299 28 47 chr10 143390208 143390419 -2198869 + MER63A DNA MER1_type 4 210 0 360 221 166 22 chr10 143390426 143390607 -2198681 + L1ME1 LINE L1 2657 2863 -3217 * 2579 232 113 65 chr10 143390597 143390996 -2198292 + L1ME1 LINE L1 3533 3911 -2169 4287 19 0 2 chr10 143390996 143391482 -2197806 + L1PA4 LINE L1 5667 6151 -4 2579 232 113 65 chr10 143391482 143392351 -2196937 + L1ME1 LINE L1 3911 4862 -1218 1337 213 56 53 chr10 143392384 143392657 -2196631 + L1ME1 LINE L1 5702 5978 -122 2047 141 0 0 chr10 143392657 143392961 -2196327 + AluSx SINE Alu 1 304 -8 1337 213 56 53 chr10 143392961 143393081 -2196207 + L1ME1 LINE L1 5978 6096 -4 221 232 23 45 chr10 143394038 143394215 -2195073 + (TATG)n Simple_repeat Simple_repeat 2 174 0 183 324 27 0 chr10 143395291 143395365 -2193923 + L2 LINE L2 2413 2488 -826 1268 148 34 8 chr10 143395367 143395604 -2193684 + MER4D LTR ERV1 505 747 -156 9055 20 0 14 chr10 143396578 143398436 -2190852 + L1PA2 LINE L1 4348 6155 0 1797 130 6 41 chr10 143399729 143400045 -2189243 + AluSx SINE Alu 1 305 -7 244 248 0 64 chr10 143401666 143401775 -2187513 + C-rich Low_complexity Low_complexity 6 107 0 193 169 34 0 chr10 143401833 143401892 -2187396 + G-rich Low_complexity Low_complexity 5 65 0 1768 127 0 58 chr10 143403662 143403970 -2185318 - AluSx SINE Alu -16 296 7 218 286 135 67 chr10 143404391 143404569 -2184719 - L2 LINE L2 -5 3267 3078 1088 254 38 21 chr10 143405247 143405611 -2183677 - MLT2D LTR ERVL 0 397 4 180 321 0 0 chr10 143406247 143406303 -2182985 - L2 LINE L2 -4 3309 3254 226 327 91 25 chr10 143406825 143407024 -2182264 + MIR SINE MIR 18 229 -33 1671 153 6 44 chr10 143407702 143408023 -2181265 - AluSx SINE Alu -3 309 1 606 204 79 26 chr10 143408437 143408589 -2180699 + MER95 LTR ERV 1 160 -271 301 241 74 37 chr10 143408620 143408782 -2180506 + MER95 LTR ERV 259 426 -5 191 272 239 0 chr10 143408857 143408949 -2180339 + L2 LINE L2 3196 3309 -4 675 274 22 0 chr10 143410047 143410226 -2179062 - MER53 DNA DNA 0 189 7 314 326 0 0 chr10 143410643 143410729 -2178559 - MIR SINE MIR 0 262 177 219 326 42 21 chr10 143410739 143410834 -2178454 - L2 LINE L2 0 3313 3217 487 197 34 0 chr10 143410907 143411024 -2178264 + MER53 DNA DNA 44 164 -25 392 312 0 2 chr10 143411043 143411173 -2178115 - MIR SINE MIR -79 129 2 267 321 209 5 chr10 143411187 143411402 -2177886 - L2 LINE L2 -84 3188 2930 288 279 0 0 chr10 143411433 143411494 -2177794 - MER45 DNA AcHobo -5 1576 1516 * 322 256 81 12 chr10 143411490 143411576 -2177712 - MER45 DNA AcHobo -835 118 27 376 325 74 39 chr10 143411635 143411918 -2177370 - L2 LINE L2 -511 2803 2511 341 242 55 97 chr10 143413195 143413360 -2175928 + MLT1I LTR MaLR 239 396 -13 364 330 26 89 chr10 143414006 143414197 -2175091 + L1M4 LINE L1 3777 3955 -2191 25 0 0 0 chr10 143415615 143415640 -2173648 + AT_rich Low_complexity Low_complexity 1 25 0 1616 173 117 23 chr10 143415981 143416323 -2172965 + MLT1A2 LTR MaLR 1 374 0 2746 91 0 0 chr10 143416448 143416801 -2172487 - THE1A LTR MaLR 0 355 3 10011 104 3 0 chr10 143416803 143418379 -2170909 - THE1A-int LTR MaLR 0 1580 1 2773 90 0 0 chr10 143418379 143418734 -2170554 - THE1A LTR MaLR 0 355 1 308 191 79 79 chr10 143419751 143419929 -2169359 + L1M4 LINE L1 4377 4554 -1592 695 289 72 12 chr10 143419985 143420317 -2168971 - L1ME4a LINE L1 -295 5826 5475 193 281 18 0 chr10 143420397 143420454 -2168834 + L2 LINE L2 3256 3313 0 223 326 35 0 chr10 143424405 143424491 -2164797 - L2 LINE L2 0 3313 3225 1236 195 10 80 chr10 143424713 143425015 -2164273 - AluJo SINE Alu -4 308 28 2290 171 29 5 chr10 143425171 143425581 -2163707 + MSTB LTR MaLR 7 426 0 658 327 125 33 chr10 143425581 143426278 -2163010 - L2 LINE L2 -785 2529 1769 1953 144 0 0 chr10 143427483 143427767 -2161521 + AluSq SINE Alu 15 298 -15 361 258 77 41 chr10 143428997 143429143 -2160145 + MLT1F1 LTR MaLR 27 166 -429 5947 30 0 3 chr10 143429143 143429840 -2159448 - L1PA4 LINE L1 0 6155 5461 361 258 77 41 chr10 143429840 143429965 -2159323 + MLT1F1 LTR MaLR 166 319 -276 187 111 22 22 chr10 143430315 143430360 -2158928 + (TCTA)n Simple_repeat Simple_repeat 2 46 0 319 269 19 10 chr10 143430365 143430469 -2158819 + CT-rich Low_complexity Low_complexity 1 105 0 342 264 143 60 chr10 143430818 143431167 -2158121 - MLT1H1 LTR MaLR -177 378 1 1632 197 3 28 chr10 143431555 143431875 -2157413 + AluJo SINE Alu 1 312 0 23 33 0 0 chr10 143432264 143432294 -2156994 + AT_rich Low_complexity Low_complexity 1 30 0 336 64 0 0 chr10 143433806 143433853 -2155435 + (CA)n Simple_repeat Simple_repeat 2 48 0 23 0 0 0 chr10 143433888 143433911 -2155377 + AT_rich Low_complexity Low_complexity 1 23 0 695 256 120 34 chr10 143434084 143434408 -2154880 + MLT1F LTR MaLR 1 363 -230 810 227 51 39 chr10 143434514 143434770 -2154518 + MLT1F1 LTR MaLR 309 567 0 537 283 98 78 chr10 143435443 143435942 -2153346 - MLT1H LTR MaLR -2 547 39 281 297 116 47 chr10 143436020 143436400 -2152888 + LTR33A LTR ERVL 71 476 -47 2018 124 0 46 chr10 143436946 143437252 -2152036 + AluSx SINE Alu 1 292 -20 23 0 0 0 chr10 143438361 143438384 -2150904 + AT_rich Low_complexity Low_complexity 1 23 0 2271 88 0 67 chr10 143438696 143439025 -2150263 - AluSg SINE Alu -1 309 3 1402 215 16 70 chr10 143439115 143439501 -2149787 + MLT1A1 LTR MaLR 1 365 0 204 297 39 86 chr10 143439623 143439717 -2149571 + L2 LINE L2 3150 3238 -34 685 254 98 10 chr10 143439717 143439910 -2149378 - MER63A DNA MER1_type 0 210 1 204 297 39 86 chr10 143439910 143439943 -2149345 + L2 LINE L2 3238 3271 -1 2368 80 0 30 chr10 143440919 143441220 -2148068 + AluSg SINE Alu 4 295 -15 382 264 39 47 chr10 143442178 143442307 -2146981 - MIR SINE MIR -22 240 113 321 267 91 17 chr10 143442430 143442606 -2146682 - LTR16C LTR ERVL 0 491 303 234 236 0 0 chr10 143443157 143443212 -2146076 + GA-rich Low_complexity Low_complexity 3 57 0 2348 103 3 0 chr10 143445216 143445518 -2143770 - AluSg SINE Alu -7 303 1 2404 103 0 0 chr10 143445527 143445838 -2143450 - AluY SINE Alu 0 311 1 477 299 91 9 chr10 143446632 143446863 -2142425 - LTR16A LTR ERVL -199 251 2 551 234 46 62 chr10 143447606 143447878 -2141410 - MLT1D LTR MaLR -159 308 40 891 216 0 50 chr10 143447885 143448182 -2141106 - AluSq SINE Alu -1 312 31 192 324 27 0 chr10 143449249 143449323 -2139965 + L2 LINE L2 2413 2488 -826 1196 148 34 8 chr10 143449325 143449562 -2139726 + MER4D LTR ERV1 505 747 -156 1164 227 97 20 chr10 143450277 143450629 -2138659 - MSTC LTR MaLR 0 428 50 1310 177 64 0 chr10 143450664 143450929 -2138359 - MSTC-int LTR MaLR 0 1735 1454 417 271 0 8 chr10 143451797 143452041 -2137247 + (TG)n Simple_repeat Simple_repeat 1 241 0 607 284 19 0 chr10 143453049 143453211 -2136077 - MSTC-int LTR MaLR -1103 632 468 1418 287 19 0 chr10 143453328 143453757 -2135531 - MSTC-int LTR MaLR -1293 442 6 1558 184 112 31 chr10 143453765 143454157 -2135131 - MSTC LTR MaLR -2 426 3 240 253 11 35 chr10 143454702 143454789 -2134499 + GA-rich Low_complexity Low_complexity 2 86 0 278 243 299 0 chr10 143454892 143454999 -2134289 + MIR SINE MIR 98 236 -26 277 179 125 0 chr10 143459283 143459339 -2129949 + MER58 DNA MER1_type 22 84 -302 251 158 35 35 chr10 143460166 143460223 -2129065 - LTR33A LTR ERVL -2 521 465 265 241 14 0 chr10 143465295 143465375 -2123913 - L1ME2 LINE L1 -6 6160 6077 864 238 87 26 chr10 143465594 143465939 -2123349 - L1ME2 LINE L1 -290 5874 5509 211 247 27 14 chr10 143466514 143466587 -2122701 + (TTCA)n Simple_repeat Simple_repeat 2 75 0 267 295 0 0 chr10 143466619 143466697 -2122591 + (CAAT)n Simple_repeat Simple_repeat 4 81 0 180 297 0 0 chr10 143466709 143466783 -2122505 + T-rich Low_complexity Low_complexity 3 76 0 1295 205 44 107 chr10 143466794 143467282 -2122006 + MER31B LTR ERV1 5 656 -5 292 221 70 0 chr10 143467916 143468002 -2121286 + MER97a DNA MER1_type? 1 92 -802 631 237 29 40 chr10 143468280 143468453 -2120835 + MER92B LTR ERV1 120 290 -346 246 237 19 47 chr10 143468467 143468577 -2120711 + MER34B LTR ERV1 3 115 -450 789 228 81 75 chr10 143469029 143469376 -2119912 + MER92B LTR ERV1 288 636 0 180 97 0 0 chr10 143470661 143470692 -2118596 + (TAGA)n Simple_repeat Simple_repeat 4 34 0 310 188 24 12 chr10 143473341 143473426 -2115862 + L1MC3 LINE L1 7012 7097 -688 390 207 0 23 chr10 143473426 143473513 -2115775 + MLT1F1 LTR MaLR 35 119 -448 1445 263 42 5 chr10 143473517 143473966 -2115322 + L1MD3 LINE L1 7404 7869 -126 899 267 74 44 chr10 143473986 143474460 -2114828 + MLT2B1 LTR ERVL 3 397 -17 210 206 0 0 chr10 143474460 143474528 -2114760 + (TA)n Simple_repeat Simple_repeat 1 68 0 201 74 0 0 chr10 143474527 143474554 -2114734 + (GA)n Simple_repeat Simple_repeat 2 28 0 * 378 42 0 0 chr10 143474618 143474666 -2114622 + (TG)n Simple_repeat Simple_repeat 2 49 0 192 77 0 0 chr10 143474731 143474757 -2114531 + (TC)n Simple_repeat Simple_repeat 2 27 0 2014 195 47 14 chr10 143474821 143475314 -2113974 + L1MDa LINE L1 1697 2205 -4335 23 33 0 0 chr10 143475465 143475495 -2113793 + AT_rich Low_complexity Low_complexity 1 30 0 268 254 0 0 chr10 143475501 143475556 -2113732 + Tigger5 DNA MER2_type 1 55 -2268 * 339 243 0 0 chr10 143475528 143475598 -2113690 + Tigger5 DNA MER2_type 2254 2323 0 272 163 0 0 chr10 143475598 143475641 -2113647 + Tigger5 DNA MER2_type 13 55 -2268 566 130 11 0 chr10 143475646 143475738 -2113550 + Tigger5 DNA MER2_type 2231 2323 0 283 298 33 0 chr10 143475738 143475859 -2113429 + (TA)n Simple_repeat Simple_repeat 1 125 0 4752 249 56 54 chr10 143475866 143478173 -2111115 + L1MDa LINE L1 2337 4657 -1883 244 269 0 15 chr10 143479421 143479488 -2109800 - MIR SINE MIR -129 133 68 315 284 52 35 chr10 143479835 143479977 -2109311 + MIR SINE MIR 7 149 -71 1047 209 46 43 chr10 143480745 143480782 -2108506 - L1MC2 LINE L1 0 6344 6309 2080 141 7 0 chr10 143480782 143481081 -2108207 - AluSx SINE Alu -11 301 1 1047 209 46 43 chr10 143481081 143481368 -2107920 - L1MC2 LINE L1 -35 6309 6019 1100 272 25 6 chr10 143482905 143483229 -2106059 + L1MB8 LINE L1 5835 6164 -14 230 274 0 16 chr10 143483519 143483581 -2105707 + G-rich Low_complexity Low_complexity 2 62 0 22 0 0 0 chr10 143483604 143483626 -2105662 + AT_rich Low_complexity Low_complexity 1 22 0 422 246 47 16 chr10 143484114 143484282 -2105006 + MSTD LTR MaLR 3 175 -221 863 181 72 72 chr10 143484749 143484998 -2104290 + MSTD LTR MaLR 148 396 0 1993 141 3 3 chr10 143486260 143486279 -2103009 - AluSx SINE Alu -8 304 286 342 0 0 0 chr10 143486279 143486317 -2102971 + (TATG)n Simple_repeat Simple_repeat 2 39 0 1993 141 3 3 chr10 143486317 143486595 -2102693 - AluSx SINE Alu -25 287 7 391 176 10 10 chr10 143486973 143487075 -2102213 + (TG)n Simple_repeat Simple_repeat 1 102 0 180 179 0 0 chr10 143487757 143487796 -2101492 + (TG)n Simple_repeat Simple_repeat 2 40 0 5036 146 21 22 chr10 143487796 143488699 -2100589 - MER4D LTR ERV1 0 903 2 324 0 0 0 chr10 143488699 143488735 -2100553 + (TG)n Simple_repeat Simple_repeat 1 36 0 1623 169 8 0 chr10 143489659 143489919 -2099369 - AluSx SINE Alu -11 301 40 319 252 75 9 chr10 143490951 143491058 -2098230 - L2 LINE L2 -8 3305 3192 2124 132 10 0 chr10 143494748 143495043 -2094245 - AluSx SINE Alu -12 300 3 1525 148 39 0 chr10 143495581 143495811 -2093477 + AluSx SINE Alu 1 239 -73 512 157 11 0 chr10 143496135 143496224 -2093064 + AluSg/x SINE Alu 211 300 -10 2205 112 28 0 chr10 143497062 143497348 -2091940 - AluSx SINE Alu -18 294 1 374 341 34 6 chr10 143498150 143498329 -2090959 + MIR SINE MIR 23 206 -56 241 238 64 49 chr10 143498589 143498736 -2090552 + MLT1I LTR MaLR 98 137 -272 1003 270 46 3 chr10 143498755 143499100 -2090188 - MER63C DNA MER1_type -496 434 75 387 358 97 40 chr10 143499176 143499332 -2089956 - L2 LINE L2 -23 3290 3144 2123 103 57 0 chr10 143499332 143499613 -2089675 + AluSx SINE Alu 1 297 -15 387 358 97 40 chr10 143499613 143500289 -2088999 - L2 LINE L2 -169 3144 2399 1928 273 82 48 chr10 143500432 143501408 -2087880 - L2 LINE L2 -1527 1787 779 985 169 0 0 chr10 143502964 143503112 -2086176 - AluJb SINE Alu -31 281 134 895 317 107 17 chr10 143503182 143503659 -2085629 - LTR33 LTR ERVL 0 521 2 1901 194 78 0 chr10 143503675 143504072 -2085216 + MSTA LTR MaLR 1 428 0 683 270 111 110 chr10 143504072 143505236 -2084052 - L2 LINE L2 -264 3049 1877 279 0 0 0 chr10 143506689 143506720 -2082568 + (TG)n Simple_repeat Simple_repeat 2 32 0 402 307 0 0 chr10 143508084 143508198 -2081090 + (CCTG)n Simple_repeat Simple_repeat 3 116 0 2400 79 0 0 chr10 143509289 143509581 -2079707 + AluY SINE Alu 1 292 -19 276 330 0 21 chr10 143509703 143509800 -2079488 + (TATATG)n Simple_repeat Simple_repeat 4 98 0 251 299 36 51 chr10 143510922 143511059 -2078229 + MER69 DNA AcHobo 64 198 -2328 1479 216 113 32 chr10 143511395 143511862 -2077426 - MLT1D LTR MaLR 0 505 1 404 270 99 45 chr10 143511963 143512296 -2076992 + MER69 DNA AcHobo 1846 2196 -330 401 215 90 73 chr10 143512341 143512518 -2076770 - MLT1A2 LTR MaLR 0 374 195 856 233 96 70 chr10 143513013 143513369 -2075919 + MLT1A1 LTR MaLR 1 365 0 231 325 84 0 chr10 143513372 143513455 -2075833 - MIR SINE MIR -151 111 22 3539 170 43 49 chr10 143514825 143515621 -2073667 - MER11C LTR ERVK -4 1067 277 880 257 46 46 chr10 143517231 143517729 -2071559 + Zaphod DNA AcHobo 512 1009 -3022 942 254 81 3 chr10 143517759 143518106 -2071182 + Zaphod DNA AcHobo 3630 4003 -28 592 141 43 0 chr10 143520415 143520549 -2068739 - AluSg/x SINE Alu 0 323 186 1155 291 103 7 chr10 143522770 143523196 -2066092 - MLT1C LTR MaLR 0 467 1 654 158 63 0 chr10 143526900 143527027 -2062261 + MER50 LTR ERV1 588 722 -12 417 271 0 8 chr10 143527701 143527945 -2061343 + (TG)n Simple_repeat Simple_repeat 1 241 0 584 260 63 77 chr10 143528176 143528541 -2060747 + L2 LINE L2 2913 3272 0 252 290 122 61 chr10 143529261 143529523 -2059765 - LTR33 LTR ERVL -233 288 11 1282 209 79 4 chr10 143530635 143530940 -2058348 - MLT1C LTR MaLR -1 466 131 320 311 44 22 chr10 143531723 143531906 -2057382 + L2 LINE L2 2836 3022 -250 248 211 127 0 chr10 143536418 143536489 -2052799 + MIR SINE MIR 30 109 -153 475 352 108 7 chr10 143539846 143540400 -2048888 + L1MC4a LINE L1 5293 5902 -1906 1140 151 99 22 chr10 143540619 143540851 -2048437 - MSTA LTR MaLR -178 250 1 1771 169 86 30 chr10 143541832 143542204 -2047084 - MSTD LTR MaLR -2 394 2 371 232 9 27 chr10 143542897 143543459 -2045829 + (TG)n Simple_repeat Simple_repeat 1 552 0 289 231 8 8 chr10 143543684 143543801 -2045487 + C-rich Low_complexity Low_complexity 3 119 0 512 217 17 0 chr10 143544257 143544372 -2044916 - L1MB4 LINE L1 -6 6174 6058 248 220 0 0 chr10 143544476 143544526 -2044762 - L1MB4 LINE L1 -77 6103 6054 345 314 0 49 chr10 143544867 143544912 -2044376 - MLT2B1 LTR ERVL 0 520 474 348 119 0 0 chr10 143544912 143544971 -2044317 + (TG)n Simple_repeat Simple_repeat 2 60 0 345 314 0 49 chr10 143544971 143545110 -2044178 - MLT2B1 LTR ERVL -46 474 345 679 302 61 3 chr10 143545736 143546047 -2043241 - MER69 DNA AcHobo -872 354 26 365 286 43 25 chr10 143546261 143546422 -2042866 - MLT1C LTR MaLR -6 461 298 384 194 18 53 chr10 143546423 143546593 -2042695 + CT-rich Low_complexity Low_complexity 1 164 0 34 79 0 0 chr10 143547843 143547919 -2041369 + GC_rich Low_complexity Low_complexity 1 76 0 811 267 31 16 chr10 143548231 143548486 -2040802 - MLT2B1 LTR ERVL -254 266 8 382 311 111 5 chr10 143549843 143550033 -2039255 - MER63A DNA MER1_type 0 210 1 355 306 102 20 chr10 143551499 143551646 -2037642 + MIR SINE MIR 45 203 -59 2377 82 0 0 chr10 143552267 143552573 -2036715 + AluY SINE Alu 6 311 0 1887 150 10 0 chr10 143553067 143553367 -2035921 + AluJo SINE Alu 7 309 -3 231 61 0 0 chr10 143554490 143554523 -2034765 + (GA)n Simple_repeat Simple_repeat 2 34 0 2157 99 0 0 chr10 143554523 143554805 -2034483 - AluSx SINE Alu -30 282 1 21 0 0 0 chr10 143554807 143554828 -2034460 + AT_rich Low_complexity Low_complexity 1 21 0 2305 106 0 0 chr10 143556936 143557247 -2032041 + AluSx SINE Alu 1 311 -1 508 242 5 84 chr10 143557515 143557584 -2031704 - MIR SINE MIR -3 259 186 1538 159 83 7 chr10 143557584 143557874 -2031414 - AluSx SINE Alu 0 312 1 508 242 5 84 chr10 143557874 143557994 -2031294 - MIR SINE MIR -76 186 85 224 385 16 25 chr10 143558258 143558380 -2030908 + MIR SINE MIR 21 141 -121 1479 207 67 90 chr10 143559294 143559772 -2029516 + MLT1C LTR MaLR 1 467 0 461 262 0 0 chr10 143560103 143560206 -2029082 + Ricksha DNA DNA 1 103 -1151 1725 194 58 6 chr10 143560372 143560733 -2028555 + Ricksha DNA DNA 2860 3239 -7 1476 231 89 5 chr10 143563726 143564132 -2025156 + LTR53 LTR ERVL 2 441 -78 339 288 143 58 chr10 143565101 143565388 -2023900 + MLT1H1 LTR MaLR 1 262 -293 2115 90 28 0 chr10 143565388 143565677 -2023611 + AluY SINE Alu 1 297 -14 180 0 0 0 chr10 143565677 143565697 -2023591 + (GA)n Simple_repeat Simple_repeat 2 21 0 339 288 143 58 chr10 143565697 143565955 -2023333 + MLT1H1 LTR MaLR 261 555 0 24 67 0 0 chr10 143567861 143567906 -2021382 + AT_rich Low_complexity Low_complexity 1 45 0 2075 198 87 45 chr10 143568582 143568695 -2020593 + L1MA9 LINE L1 5713 5820 -492 2048 118 0 0 chr10 143568695 143568984 -2020304 + AluY SINE Alu 6 294 -17 2075 198 87 45 chr10 143568984 143569374 -2019914 + L1MA9 LINE L1 5820 6246 -66 2106 86 4 0 chr10 143569374 143569696 -2019592 + AluSc SINE Alu 1 323 0 2075 198 87 45 chr10 143569696 143569766 -2019522 + L1MA9 LINE L1 6246 6312 0 254 364 45 0 chr10 143571345 143571455 -2017833 - MIR SINE MIR -109 153 39 195 225 0 0 chr10 143571649 143571720 -2017568 + (TG)n Simple_repeat Simple_repeat 2 72 0 2587 112 3 24 chr10 143571836 143572219 -2017069 - THE1C LTR MaLR 0 375 1 2442 171 48 0 chr10 143572457 143572878 -2016410 - L1PA15 LINE L1 -2 6163 5723 1176 293 46 54 chr10 143573167 143574472 -2014816 + L1ME3A LINE L1 4613 5906 -264 288 274 59 54 chr10 143574475 143574661 -2014627 + MLT1G LTR MaLR 2 188 -402 * 291 212 283 0 chr10 143574660 143574759 -2014529 - MLT1G LTR MaLR -5 585 459 469 317 59 4 chr10 143574931 143575165 -2014123 + L1ME3A LINE L1 5913 6162 -2 330 245 200 20 chr10 143575173 143575362 -2013926 - MIR SINE MIR -3 259 28 472 318 68 18 chr10 143575403 143575764 -2013524 + L1ME LINE L1 5329 5679 -442 197 86 57 0 chr10 143575816 143575851 -2013437 + GA-rich Low_complexity Low_complexity 4 40 0 471 218 0 0 chr10 143575884 143575971 -2013317 + FLAM_A SINE Alu 3 89 -53 22 70 0 0 chr10 143576313 143576356 -2012932 + AT_rich Low_complexity Low_complexity 1 43 0 21 36 0 0 chr10 143576546 143576574 -2012714 + AT_rich Low_complexity Low_complexity 1 28 0 356 65 0 0 chr10 143576786 143576832 -2012456 - L1PA15 LINE L1 -542 5621 5576 328 288 5 13 chr10 143577775 143578209 -2011079 + (CA)n Simple_repeat Simple_repeat 1 430 0 2141 270 81 21 chr10 143579413 143580166 -2009122 + L1MC3 LINE L1 1 798 -5247 * 8688 229 80 59 chr10 143580136 143582459 -2006829 + L1MC3 LINE L1 2474 4747 -3456 889 181 0 6 chr10 143582459 143582625 -2006663 + AluSp SINE Alu 137 301 -12 8688 229 80 59 chr10 143582625 143585372 -2003916 + L1MC3 LINE L1 4747 7435 -768 857 30 0 0 chr10 143585372 143585471 -2003817 + L1PA4 LINE L1 6049 6147 -8 8688 229 80 59 chr10 143585471 143585502 -2003786 + L1MC3 LINE L1 7435 7464 -739 1852 77 40 0 chr10 143585502 143585776 -2003512 + L1MA5A LINE L1 6009 6293 -4 8688 229 80 59 chr10 143585776 143586122 -2003166 + L1MC3 LINE L1 7464 8202 -1 306 342 107 22 chr10 143586150 143586375 -2002913 - MIR SINE MIR -10 252 9 232 255 0 0 chr10 143586521 143586568 -2002720 + (CA)n Simple_repeat Simple_repeat 2 48 0 585 261 33 7 chr10 143590217 143590370 -1998918 - MER58A DNA MER1_type 0 158 2 2069 143 0 0 chr10 143591011 143591319 -1997969 + AluSx SINE Alu 1 308 -4 741 248 96 4 chr10 143591326 143591587 -1997701 + MLT1C LTR MaLR 199 467 0 279 264 14 0 chr10 143592630 143592702 -1996586 - L2 LINE L2 -1 3312 3240 1969 141 10 0 chr10 143592723 143593022 -1996266 + AluSq SINE Alu 1 302 -11 182 227 30 45 chr10 143593027 143593093 -1996195 + L2 LINE L2 2889 2953 -360 1806 245 47 16 chr10 143593565 143594050 -1995238 - MLT1D LTR MaLR -2 503 4 466 344 0 0 chr10 143594081 143594261 -1995027 + C-rich Low_complexity Low_complexity 1 180 0 4972 96 14 12 chr10 143594520 143595248 -1994040 + L1PB1 LINE L1 5423 6151 0 3538 200 30 11 chr10 143595282 143596152 -1993136 + L1 LINE L1 2876 3761 -2385 482 264 52 7 chr10 143598870 143599025 -1990263 - MIR3 SINE MIR -11 197 36 308 284 188 20 chr10 143599728 143599925 -1989363 - MIR SINE MIR 0 262 33 2687 20 0 0 chr10 143600120 143600424 -1988864 - L1PA4 LINE L1 0 6155 5852 201 224 0 0 chr10 143600846 143600904 -1988384 + (TG)n Simple_repeat Simple_repeat 2 59 0 472 313 101 65 chr10 143601637 143602071 -1987217 + L1MEd LINE L1 1052 1501 -4915 1508 195 83 45 chr10 143602072 143602143 -1987145 - MLT1B LTR MaLR 0 390 323 3777 59 2 4 chr10 143602143 143602621 -1986667 - L1PA7 LINE L1 0 6154 5678 1508 195 83 45 chr10 143602621 143602924 -1986364 - MLT1B LTR MaLR -67 323 2 359 235 81 31 chr10 143602929 143603158 -1986130 + L1MEd LINE L1 1330 1773 -4784 457 212 93 36 chr10 143603376 143603569 -1985719 - L1MC4a LINE L1 -1403 6405 6202 250 200 12 50 chr10 143603643 143603723 -1985565 - L1MC4a LINE L1 -1746 6062 5986 189 147 0 0 chr10 143603729 143603763 -1985525 + (TCCCC)n Simple_repeat Simple_repeat 5 38 0 3356 169 24 6 chr10 143603772 143604393 -1984895 - L1PB4 LINE L1 -1 6155 5524 1457 107 36 0 chr10 143604401 143604625 -1984663 + AluSq SINE Alu 1 232 -81 250 302 17 26 chr10 143604781 143604897 -1984391 + CT-rich Low_complexity Low_complexity 5 119 0 1483 182 14 0 chr10 143605107 143605387 -1983901 - AluSx SINE Alu -28 284 1 836 141 82 12 chr10 143605388 143605558 -1983730 - L1PB4 LINE L1 -657 5499 5318 1646 154 48 3 chr10 143605560 143605853 -1983435 - AluSx SINE Alu -6 306 1 210 287 22 39 chr10 143606116 143606297 -1982991 + GA-rich Low_complexity Low_complexity 2 179 0 350 157 0 49 chr10 143606472 143606574 -1982714 + CT-rich Low_complexity Low_complexity 4 100 0 547 245 157 69 chr10 143606607 143606927 -1982361 - L1MDa LINE L1 -2887 3328 2962 2184 57 3 11 chr10 143606927 143607245 -1982043 - AluY SINE Alu 0 316 1 547 245 157 69 chr10 143607245 143607331 -1981957 - L1MDa LINE L1 -3253 2962 2885 335 324 14 0 chr10 143607336 143607484 -1981804 - L1MDa LINE L1 -3320 2895 2746 400 288 69 43 chr10 143607657 143607981 -1981307 - L1MDa LINE L1 -3816 2399 2108 228 306 134 36 chr10 143608198 143608534 -1980754 - HAL1b LINE L1 -501 847 479 369 280 100 86 chr10 143608826 143609211 -1980077 - L1MEc LINE L1 -2868 3347 970 214 197 0 49 chr10 143609721 143609782 -1979506 + T-rich Low_complexity Low_complexity 3 60 0 917 293 42 39 chr10 143610122 143610531 -1978757 + L1ME1 LINE L1 5747 6156 -10 327 271 39 58 chr10 143610546 143610701 -1978587 + L1MEc LINE L1 1633 1784 -4612 1297 277 80 36 chr10 143611077 143611780 -1977508 + HAL1b LINE L1 552 1285 -63 272 276 179 21 chr10 143611901 143612046 -1977242 - MIR SINE MIR -75 187 20 439 295 218 23 chr10 143612096 143612744 -1976544 - LTR50 LTR ERVL -1 794 21 629 130 0 9 chr10 143613715 143613823 -1975465 + (GGAA)n Simple_repeat Simple_repeat 4 110 0 228 296 61 31 chr10 143613823 143613921 -1975367 + MIR SINE MIR 20 120 -88 2060 102 16 19 chr10 143614313 143614627 -1974661 + AluSp SINE Alu 1 313 0 1041 241 125 65 chr10 143616343 143616403 -1972885 - MLT2B2 LTR ERVL 0 515 460 192 77 0 0 chr10 143616403 143616429 -1972859 + (TCTG)n Simple_repeat Simple_repeat 3 28 0 1041 241 125 65 chr10 143616429 143616841 -1972447 - MLT2B2 LTR ERVL -55 460 15 190 326 130 22 chr10 143617058 143617196 -1972092 + MIR SINE MIR 109 261 -1 568 279 73 33 chr10 143617604 143617876 -1971412 + MLT1I LTR MaLR 106 388 -21 396 274 10 0 chr10 143619044 143619146 -1970142 + MIR SINE MIR 33 135 -73 2115 132 16 44 chr10 143622733 143623119 -1966169 - THE1C LTR MaLR 0 375 1 791 153 0 0 chr10 143623367 143623485 -1965803 + FLAM_C SINE Alu 1 118 -15 193 314 133 0 chr10 143624047 143624152 -1965136 + L2 LINE L2 2382 2500 -814 209 299 29 121 chr10 143624400 143624502 -1964786 + L2 LINE L2 2829 2939 -333 213 94 0 0 chr10 143624502 143624534 -1964754 + (CA)n Simple_repeat Simple_repeat 2 33 0 222 37 0 0 chr10 143624543 143624570 -1964718 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 209 299 29 121 chr10 143624570 143624584 -1964704 + L2 LINE L2 2947 2961 -311 1698 138 0 28 chr10 143624584 143624831 -1964457 - AluSx SINE Alu -72 240 1 209 299 29 121 chr10 143624831 143625017 -1964271 + L2 LINE L2 2961 3113 -159 243 357 49 15 chr10 143626368 143626634 -1962654 + L2 LINE L2 2686 2960 -354 593 231 211 15 chr10 143626679 143626939 -1962349 + LTR50 LTR ERVL 485 795 0 321 277 25 114 chr10 143627359 143627561 -1961727 + ERVL LTR ERVL 510 693 -5071 273 317 53 62 chr10 143627669 143627912 -1961376 + ERVL LTR ERVL 749 989 -4496 203 161 0 0 chr10 143628138 143628169 -1961119 + (CATATA)n Simple_repeat Simple_repeat 3 33 0 1915 327 50 18 chr10 143628412 143629854 -1959434 + ERVL LTR ERVL 1467 3005 -2525 708 303 18 21 chr10 143629933 143630217 -1959071 - MER41E LTR ERV1 -4 508 226 792 225 56 0 chr10 143630572 143630750 -1958538 - MER5A DNA MER1_type -1 188 1 1626 173 129 65 chr10 143630816 143631249 -1958039 - MLT1C LTR MaLR -4 463 3 2081 144 36 30 chr10 143631282 143631644 -1957644 - THE1B LTR MaLR 0 364 1 2111 311 78 19 chr10 143631713 143632951 -1956337 + ERVL LTR ERVL 3523 4832 -932 1116 261 47 29 chr10 143632961 143633344 -1955944 - MSTD LTR MaLR -6 390 1 446 333 24 58 chr10 143633367 143633697 -1955591 + ERVL LTR ERVL 4944 5262 -502 550 217 39 0 chr10 143633845 143633981 -1955307 - MLT1D LTR MaLR -309 196 41 304 311 10 0 chr10 143633991 143634094 -1955194 + MLT1D LTR MaLR 402 505 0 207 343 10 20 chr10 143637966 143638065 -1951223 - MIR3 SINE MIR -26 182 85 255 331 54 23 chr10 143638397 143638527 -1950761 + MIR SINE MIR 9 142 -120 552 283 92 0 chr10 143638759 143638932 -1950356 + MIR SINE MIR 40 228 -34 511 215 101 0 chr10 143639816 143639974 -1949314 - LTR50 LTR ERVL -278 517 344 231 300 85 0 chr10 143640950 143641080 -1948208 - L1M4 LINE L1 -818 5328 5188 214 341 85 23 chr10 143641460 143641589 -1947699 - MIR SINE MIR 0 262 126 363 23 0 0 chr10 143642117 143642161 -1947127 + (TG)n Simple_repeat Simple_repeat 1 44 0 225 0 0 0 chr10 143642160 143642185 -1947103 + (GA)n Simple_repeat Simple_repeat 1 25 0 * 393 58 0 0 chr10 143642184 143642236 -1947052 + (TGGA)n Simple_repeat Simple_repeat 2 53 0 2266 173 26 14 chr10 143642238 143642659 -1946629 + MSTB LTR MaLR 1 426 0 315 190 51 25 chr10 143643190 143643348 -1945940 + (TATAA)n Simple_repeat Simple_repeat 1 162 0 292 341 79 0 chr10 143643380 143643506 -1945782 - L2 LINE L2 -25 3247 3112 2005 108 117 18 chr10 143644030 143644371 -1944917 - THE1C LTR MaLR 0 375 1 216 274 7 14 chr10 143645281 143645433 -1943855 + GA-rich Low_complexity Low_complexity 1 150 0 247 209 60 0 chr10 143646002 143646069 -1943219 + L1MD3 LINE L1 7925 7995 0 198 270 0 0 chr10 143646313 143646387 -1942901 + (CA)n Simple_repeat Simple_repeat 1 74 0 852 258 52 9 chr10 143648001 143648234 -1941054 + MER46C DNA MER2_type 2 244 -94 438 20 0 0 chr10 143648895 143648946 -1940342 + (CA)n Simple_repeat Simple_repeat 1 51 0 741 208 20 15 chr10 143649451 143649653 -1939635 - MER6 DNA MER2_type -4 861 659 366 181 0 28 chr10 143649666 143649738 -1939550 + AluJb SINE Alu 40 109 -193 1342 206 68 45 chr10 143650766 143651121 -1938167 + MLT1A1 LTR MaLR 1 363 -2 1916 134 0 4 chr10 143651224 143651492 -1937796 + AluSx SINE Alu 1 267 -45 314 311 41 8 chr10 143653807 143653929 -1935359 + MER5B DNA MER1_type 51 176 -2 1815 148 7 0 chr10 143654859 143655137 -1934151 + AluSx SINE Alu 1 280 -32 220 291 86 26 chr10 143659755 143659872 -1929416 - MIR3 SINE MIR -9 199 76 233 372 18 0 chr10 143660782 143660895 -1928393 + MLT1I LTR MaLR 288 402 -7 246 172 31 31 chr10 143662175 143662239 -1927049 - L1MC/D LINE L1 -2339 5469 5406 408 263 88 14 chr10 143662257 143662545 -1926743 - L1ME2 LINE L1 -10 6160 5842 1547 64 5 0 chr10 143662545 143662733 -1926555 - AluSp SINE Alu -124 189 1 2793 183 32 27 chr10 143662733 143663457 -1925831 - L1MB8 LINE L1 -285 6704 5976 2060 128 21 3 chr10 143663457 143663747 -1925541 - AluSc SINE Alu -9 300 6 2793 183 32 27 chr10 143663747 143663844 -1925444 - L1MB8 LINE L1 -1013 5976 5881 2882 278 72 12 chr10 143663859 143665090 -1924198 - L1MB8 LINE L1 -2378 4579 3275 631 251 70 65 chr10 143665106 143665536 -1923752 - L1MB8 LINE L1 -3749 3220 2812 * 1954 240 93 64 chr10 143665534 143665837 -1923451 - L1MB8 LINE L1 -4762 2197 1904 2016 135 3 3 chr10 143665837 143666141 -1923147 - AluSx SINE Alu 0 304 1 1954 240 93 64 chr10 143666141 143667217 -1922071 - L1MB8 LINE L1 -5055 1904 812 204 291 67 75 chr10 143667772 143667906 -1921382 + L2 LINE L2 3181 3313 0 184 377 65 7 chr10 143669206 143669344 -1919944 + L2 LINE L2 3126 3271 -1 233 297 149 0 chr10 143670131 143670205 -1919083 - MIR SINE MIR -120 142 58 2057 236 98 19 chr10 143670965 143671580 -1917708 - L1MC3 LINE L1 0 7785 7123 454 217 79 138 chr10 143671632 143671821 -1917467 + MLT1D LTR MaLR 210 502 -3 3664 217 39 45 chr10 143671831 143672848 -1916440 - L1MC3 LINE L1 -767 7018 6008 241 254 16 0 chr10 143672851 143672914 -1916374 - L1MC2 LINE L1 -273 6071 6008 243 270 16 0 chr10 143672917 143672980 -1916308 - L1MC2 LINE L1 -273 6071 6008 243 222 16 0 chr10 143672983 143673046 -1916242 - L1MC2 LINE L1 -273 6071 6008 302 254 16 0 chr10 143673049 143673112 -1916176 - L1MC2 LINE L1 -273 6071 6008 235 238 16 0 chr10 143673115 143673178 -1916110 - L1MC2 LINE L1 -273 6071 6008 252 222 16 0 chr10 143673181 143673244 -1916044 - L1MC2 LINE L1 -273 6071 6008 256 238 16 0 chr10 143673313 143673376 -1915912 - L1MC2 LINE L1 -273 6071 6008 250 222 16 0 chr10 143673379 143673442 -1915846 - L1MC2 LINE L1 -273 6071 6008 232 254 16 0 chr10 143673445 143673508 -1915780 - L1MC2 LINE L1 -273 6071 6008 317 238 16 0 chr10 143673511 143673574 -1915714 - L1MC2 LINE L1 -273 6071 6008 265 222 16 0 chr10 143673577 143673640 -1915648 - L1MC2 LINE L1 -273 6071 6008 256 238 16 0 chr10 143673643 143673706 -1915582 - L1MC2 LINE L1 -273 6071 6008 277 206 16 0 chr10 143673709 143673772 -1915516 - L1MC2 LINE L1 -273 6071 6008 256 238 16 0 chr10 143673775 143673838 -1915450 - L1MC2 LINE L1 -273 6071 6008 276 206 16 0 chr10 143673841 143673904 -1915384 - L1MC2 LINE L1 -273 6071 6008 2882 201 17 45 chr10 143673907 143674594 -1914694 - L1MC2 LINE L1 -273 6071 5403 1887 171 3 3 chr10 143674594 143674887 -1914401 + AluJo SINE Alu 1 293 -19 2882 201 17 45 chr10 143674887 143674906 -1914382 - L1MC2 LINE L1 -941 5403 5385 821 127 0 0 chr10 143674906 143675024 -1914264 - AluSg/x SINE Alu -2 310 193 631 184 22 8 chr10 143675024 143675193 -1914095 - L1MC2 LINE L1 -744 5402 5231 2658 239 56 6 chr10 143675298 143676104 -1913184 - L1MC2 LINE L1 -874 5272 4427 338 222 0 28 chr10 143676591 143676663 -1912625 - MLT2E LTR ERVL -512 116 47 302 244 9 4 chr10 143679495 143679727 -1909561 + (TG)n Simple_repeat Simple_repeat 1 233 0 222 236 12 6 chr10 143679760 143679921 -1909367 + (TG)n Simple_repeat Simple_repeat 1 162 0 322 220 14 0 chr10 143679986 143680127 -1909161 + (TG)n Simple_repeat Simple_repeat 1 143 0 383 225 19 4 chr10 143680142 143680409 -1908879 + (TG)n Simple_repeat Simple_repeat 1 271 0 355 230 7 25 chr10 143680444 143680884 -1908404 + (TG)n Simple_repeat Simple_repeat 1 432 0 215 224 9 0 chr10 143680922 143681029 -1908259 + (TG)n Simple_repeat Simple_repeat 1 108 0 449 234 9 17 chr10 143681050 143681413 -1907875 + (TG)n Simple_repeat Simple_repeat 1 360 0 275 305 158 25 chr10 143682739 143682942 -1906346 - LTR33 LTR ERVL 0 521 292 233 341 0 0 chr10 143685086 143685212 -1904076 + CT-rich Low_complexity Low_complexity 3 128 0 332 182 0 106 chr10 143685230 143685428 -1903860 + CT-rich Low_complexity Low_complexity 3 179 0 236 311 81 0 chr10 143688602 143688676 -1900612 + MLT1I LTR MaLR 318 397 -12 1071 220 168 10 chr10 143688908 143689294 -1899994 - MER31B LTR ERV1 -19 447 1 550 297 10 47 chr10 143689760 143689952 -1899336 - MER5A DNA MER1_type -2 187 3 213 154 0 0 chr10 143690260 143690299 -1898989 + (CA)n Simple_repeat Simple_repeat 1 39 0 340 244 199 32 chr10 143690873 143691029 -1898259 - MIR SINE MIR -80 182 1 319 323 106 20 chr10 143691326 143691524 -1897764 + MIR SINE MIR 31 245 -17 745 308 94 25 chr10 143692340 143692937 -1896351 - MLT2F LTR ERVL -9 654 17 183 80 0 0 chr10 143693174 143693199 -1896089 + (TAAA)n Simple_repeat Simple_repeat 1 25 0 1982 170 37 32 chr10 143693500 143694035 -1895253 - MLT2A2 LTR ERVL -15 539 1 1056 319 100 55 chr10 143694774 143695612 -1893676 + L1 LINE L1 3117 3992 -2154 707 349 39 34 chr10 143695663 143696078 -1893210 + L1 LINE L1 4066 4482 -1664 235 382 24 18 chr10 143697326 143697496 -1891792 + MIR3 SINE MIR 31 201 -7 1984 141 18 0 chr10 143697960 143698244 -1891044 - AluSx SINE Alu -13 299 11 238 319 121 25 chr10 143698256 143698413 -1890875 + L2 LINE L2 2520 2691 -623 229 191 191 29 chr10 143698456 143698561 -1890727 - LTR16A LTR ERVL -75 375 254 213 263 50 38 chr10 143701058 143701138 -1888150 - L2 LINE L2 -228 3044 2964 187 304 0 0 chr10 143701280 143701326 -1887962 - MIR SINE MIR -55 153 108 412 349 130 18 chr10 143701881 143702211 -1887077 + L3 LINE CR1 1178 1544 -33 1302 196 71 46 chr10 143702507 143702874 -1886414 + L1MA9 LINE L1 5899 6274 -38 195 241 37 0 chr10 143703014 143703068 -1886220 - MIR SINE MIR -78 184 129 1850 136 63 41 chr10 143703211 143703578 -1885710 + THE1C LTR MaLR 1 375 0 183 313 127 40 chr10 143705190 143705340 -1883948 + MER5B DNA MER1_type 5 167 -11 248 270 22 56 chr10 143705418 143705507 -1883781 - MER5A DNA MER1_type -90 99 14 23 54 0 0 chr10 143706645 143706682 -1882606 + AT_rich Low_complexity Low_complexity 1 37 0 225 254 32 0 chr10 143706990 143707053 -1882235 + L2 LINE L2 3248 3312 -1 2198 105 0 46 chr10 143707063 143707388 -1881900 - AluSx SINE Alu -2 310 1 250 333 44 0 chr10 143707940 143708054 -1881234 + MIR SINE MIR 143 261 -1 188 331 126 24 chr10 143708168 143708295 -1880993 - MIR SINE MIR -22 240 101 358 350 133 34 chr10 143708326 143708620 -1880668 - L2 LINE L2 -3 3310 2988 449 128 0 0 chr10 143708653 143708731 -1880557 - L1PA6 LINE L1 -1 6153 6076 602 184 6 74 chr10 143708732 143708895 -1880393 + L1MD1 LINE L1 6085 6236 -6 235 311 22 11 chr10 143708898 143708988 -1880300 + (TATG)n Simple_repeat Simple_repeat 1 91 0 187 297 27 0 chr10 143709122 143709196 -1880092 + L2 LINE L2 2046 2121 -1193 492 321 230 8 chr10 143709216 143709689 -1879599 + L2 LINE L2 2259 2836 -478 292 289 91 48 chr10 143709690 143709877 -1879411 + L2 LINE L2 2780 2964 -308 217 214 0 0 chr10 143709868 143709910 -1879378 - L2 LINE L2 -3 3310 3269 * 1526 240 26 15 chr10 143709922 143710313 -1878975 - L1ME1 LINE L1 -339 5827 5433 1433 106 5 14 chr10 143710683 143710900 -1878388 + L1PA5 LINE L1 5940 6154 0 253 203 16 31 chr10 143711976 143712040 -1877248 + L2 LINE L2 3209 3271 -1 995 245 69 42 chr10 143713146 143713481 -1875807 - MER2 DNA MER2_type 0 344 1 206 348 159 10 chr10 143714069 143714276 -1875012 + L2 LINE L2 2432 2669 -645 209 297 14 40 chr10 143714446 143714520 -1874768 - MIR SINE MIR -87 175 104 284 352 155 23 chr10 143714620 143714930 -1874358 + L2 LINE L2 2920 3270 -2 183 309 0 85 chr10 143716115 143716209 -1873079 - L2 LINE L2 -307 2965 2880 452 274 63 0 chr10 143717417 143717592 -1871696 - LTR16A1 LTR ERVL -10 447 262 2130 55 34 94 chr10 143717954 143718282 -1871006 + AluY SINE Alu 1 308 -3 2272 117 7 0 chr10 143719778 143720078 -1869210 - AluSq SINE Alu -11 302 1 1228 200 125 0 chr10 143772917 143773222 -1816066 - MER54A LTR ERVL -558 343 1 1022 245 110 57 chr10 143776455 143776883 -1812405 + MER31B LTR ERV1 6 651 -10 856 196 52 0 chr10 143776899 143777072 -1812216 + MER20 DNA MER1_type 6 187 -32 198 171 0 0 chr10 143778222 143778263 -1811025 + (TG)n Simple_repeat Simple_repeat 1 41 0 273 333 60 0 chr10 143779382 143779499 -1809789 + MIR3 SINE MIR 75 198 -10 595 250 28 11 chr10 143779518 143779694 -1809594 - L3 LINE CR1 -801 776 598 283 355 0 9 chr10 143780199 143780309 -1808979 + MER21B LTR ERV1 1 109 -754 1555 261 47 55 chr10 143780367 143780991 -1808297 + MER21B LTR ERV1 136 754 -109 422 251 142 53 chr10 143781254 143781720 -1807568 - L2 LINE L2 -91 3222 2709 1973 137 7 0 chr10 143782538 143782838 -1806450 + AluSx SINE Alu 1 302 -10 342 294 78 33 chr10 143783591 143783771 -1805517 + LTR43 LTR ERV1 189 376 -226 2351 65 10 0 chr10 143784123 143784416 -1804872 - AluY SINE Alu -15 296 1 645 195 8 0 chr10 143784551 143784674 -1804614 + AluSg/x SINE Alu 184 307 -5 190 290 159 9 chr10 143784861 143784968 -1804320 + L2 LINE L2 3190 3312 -1 1121 307 106 53 chr10 143786366 143786684 -1802604 + L1M2 LINE L1 1756 2056 -4792 1903 166 0 0 chr10 143786684 143786982 -1802306 + AluSx SINE Alu 1 301 -11 184 30 61 0 chr10 143786982 143787015 -1802273 + (TTAAA)n Simple_repeat Simple_repeat 2 36 0 1121 307 106 53 chr10 143787023 143787271 -1802017 + L1M2 LINE L1 2056 2290 -4558 2285 82 0 3 chr10 143787271 143787576 -1801712 + AluY SINE Alu 1 304 -7 1121 307 106 53 chr10 143787576 143787888 -1801400 + L1M2 LINE L1 2290 5842 -1006 652 293 75 40 chr10 143787931 143788306 -1800982 + L1MC/D LINE L1 5353 5740 -2068 457 334 77 70 chr10 143788622 143789065 -1800223 + L1MC4 LINE L1 7595 8040 -2 203 213 0 16 chr10 143790063 143790124 -1799164 + (CA)n Simple_repeat Simple_repeat 2 61 0 207 235 15 29 chr10 143791521 143791589 -1797699 + (CAGGG)n Simple_repeat Simple_repeat 3 69 0 1507 194 31 4 chr10 143794118 143794458 -1794830 + MLT1A1 LTR MaLR 1 353 -12 281 349 27 14 chr10 143794470 143794616 -1794672 + L2 LINE L2 3165 3312 -1 480 327 44 6 chr10 143795188 143795347 -1793941 + MIR SINE MIR 32 196 -66 433 264 63 13 chr10 143795464 143795623 -1793665 - MLT1G1 LTR MaLR 0 595 429 * 507 237 92 66 chr10 143795614 143795920 -1793368 - MLT1G1 LTR MaLR -239 316 37 351 121 0 0 chr10 143796515 143796573 -1792715 + (A)n Simple_repeat Simple_repeat 1 58 0 639 328 92 9 chr10 143797973 143798440 -1790848 - LTR33 LTR ERVL -7 514 9 361 276 92 25 chr10 143799613 143799809 -1789479 - ERVL LTR ERVL -1565 4199 3991 461 321 17 50 chr10 143800631 143800933 -1788355 + LTR41 LTR ERVL 464 755 -18 297 288 36 18 chr10 143801597 143801708 -1787580 - MIR SINE MIR -62 146 34 231 146 0 0 chr10 143802919 143802960 -1786328 + (GGCTG)n Simple_repeat Simple_repeat 3 43 0 367 234 196 38 chr10 143803623 143803807 -1785481 - MER20 DNA MER1_type -6 213 1 274 86 0 0 chr10 143804205 143804240 -1785048 - Alu SINE Alu -36 266 232 1371 115 5 0 chr10 143804345 143804563 -1784725 + AluSq SINE Alu 94 312 0 1866 151 0 35 chr10 143805381 143805700 -1783588 + AluSx SINE Alu 1 308 -4 710 307 57 14 chr10 143805726 143806028 -1783260 + L1MC/D LINE L1 860 1177 -5369 252 250 87 11 chr10 143806000 143806092 -1783196 + L1MC/D LINE L1 5470 5568 -1076 * 770 247 7 12 chr10 143806073 143806279 -1783009 + L1MB4 LINE L1 5993 6188 0 568 333 129 27 chr10 143806390 143806793 -1782495 + L1MC/D LINE L1 5846 6289 -2017 816 183 0 0 chr10 143807070 143807295 -1781993 + (TG)n Simple_repeat Simple_repeat 1 225 0 264 271 119 59 chr10 143810275 143810511 -1778777 - MLT2F LTR ERVL -141 522 273 280 349 111 19 chr10 143812292 143812599 -1776689 + L2 LINE L2 2908 3242 -30 398 189 24 24 chr10 143813244 143813371 -1775917 + CT-rich Low_complexity Low_complexity 3 129 0 231 203 0 0 chr10 143817558 143817627 -1771661 + CT-rich Low_complexity Low_complexity 1 69 0 371 250 24 0 chr10 143818151 143818315 -1770973 + GA-rich Low_complexity Low_complexity 3 170 0 184 382 61 0 chr10 143818483 143818614 -1770674 - L2 LINE L2 -1 3271 3133 827 119 0 50 chr10 143819002 143819222 -1770066 + (CA)n Simple_repeat Simple_repeat 1 208 0 1882 236 71 65 chr10 143819704 143820394 -1768894 + LTR8A LTR ERV1 34 727 0 1070 189 26 22 chr10 143822302 143822572 -1766716 - MER33 DNA MER1_type -20 304 34 649 109 0 0 chr10 143822775 143822867 -1766421 + LTR7 LTR ERV1 1 92 -358 946 63 0 8 chr10 143822898 143823025 -1766263 + LTR7 LTR ERV1 325 450 0 2776 216 33 15 chr10 143823600 143824206 -1765082 - LTR35 LTR ERV1 0 618 2 983 289 44 109 chr10 143824521 143825092 -1764196 - MER21B LTR ERV1 -237 626 93 1718 154 20 67 chr10 143825096 143825756 -1763532 - LTR26E LTR ERV1 0 622 282 2803 151 58 58 chr10 143825100 143825286 -1764002 - LTR26E LTR ERV1 -4 618 433 1571 211 3 7 chr10 143825286 143825589 -1763699 + AluJo SINE Alu 1 302 -10 2803 151 58 58 chr10 143825589 143826020 -1763268 - LTR26E LTR ERV1 -188 434 1 1536 144 68 10 chr10 143826030 143826322 -1762966 + MER4D LTR ERV1 60 368 -535 3188 148 23 11 chr10 143826471 143827032 -1762256 + MER4D LTR ERV1 336 903 0 2590 271 75 64 chr10 143829601 143831311 -1757977 + L1MDa LINE L1 16 1724 -4816 291 343 63 58 chr10 143831491 143831856 -1757432 - L1ME LINE L1 -305 5865 5499 426 267 125 52 chr10 143832036 143832268 -1757020 - L1ME LINE L1 -905 5241 4993 249 230 95 27 chr10 143834721 143834795 -1754493 - LTR33A LTR ERVL -333 190 112 604 198 193 30 chr10 143834972 143835341 -1753947 - MLT1D LTR MaLR -15 490 24 306 294 46 9 chr10 143835372 143835481 -1753807 - MIR SINE MIR -118 144 32 282 129 40 59 chr10 143836449 143836550 -1752738 + GA-rich Low_complexity Low_complexity 4 102 0 937 264 60 46 chr10 143837963 143838054 -1751234 + MLT1B LTR MaLR 1 89 -301 2324 119 56 19 chr10 143838054 143838423 -1750865 + MSTB LTR MaLR 1 388 -38 2208 126 0 10 chr10 143838423 143838733 -1750555 - AluSx SINE Alu -5 307 1 2324 119 56 19 chr10 143838733 143838774 -1750514 + MSTB LTR MaLR 388 426 0 937 264 60 46 chr10 143838774 143839050 -1750238 + MLT1B LTR MaLR 89 373 -17 373 238 0 0 chr10 143839257 143839337 -1749951 - MLT1B LTR MaLR -40 350 271 487 258 25 0 chr10 143839522 143839642 -1749646 - MIR SINE MIR -137 125 3 857 308 91 46 chr10 143840139 143840938 -1748350 + L1MEd LINE L1 5 839 -5280 293 200 31 0 chr10 143841001 143841066 -1748222 - L1M3 LINE L1 -822 5512 5446 1904 165 86 20 chr10 143841067 143841576 -1747712 - MLT2A2 LTR ERVL 0 554 1 3123 198 23 27 chr10 143841576 143842359 -1746929 - L1M3 LINE L1 -743 5403 4669 222 329 0 0 chr10 143843202 143843272 -1746016 + MIR SINE MIR 128 197 -65 1396 250 99 2 chr10 143844947 143845403 -1743885 + LTR53 LTR ERVL 6 505 -14 207 255 0 0 chr10 143845746 143845797 -1743491 + (CCTG)n Simple_repeat Simple_repeat 1 51 0 23 33 0 0 chr10 143846291 143846321 -1742967 + AT_rich Low_complexity Low_complexity 1 30 0 24 0 0 0 chr10 143846425 143846449 -1742839 + AT_rich Low_complexity Low_complexity 1 24 0 218 273 0 30 chr10 143847748 143847814 -1741474 - L2 LINE L2 -254 3018 2955 2279 117 0 3 chr10 143848375 143848675 -1740613 - AluSq SINE Alu -14 299 1 2160 139 26 59 chr10 143849784 143850082 -1739206 - MER65A LTR ERV1 0 445 139 1714 172 4 0 chr10 143850082 143850361 -1738927 + AluJo SINE Alu 1 280 -32 249 33 0 0 chr10 143850361 143850391 -1738897 + (TAAAA)n Simple_repeat Simple_repeat 1 30 0 2160 139 26 59 chr10 143850391 143850551 -1738737 - MER65A LTR ERV1 -304 141 1 2887 240 75 36 chr10 143851463 143852816 -1736472 - L1MC3 LINE L1 -1 7990 6665 183 382 15 0 chr10 143852836 143852904 -1736384 - L2 LINE L2 0 3272 3204 527 313 6 6 chr10 143854416 143854595 -1734693 + (CA)n Simple_repeat Simple_repeat 2 180 0 297 0 0 0 chr10 143854634 143854667 -1734621 + (CA)n Simple_repeat Simple_repeat 2 34 0 1111 211 75 128 chr10 143854782 143855276 -1734012 + MER70A LTR ERVL 5 472 0 253 163 0 0 chr10 143855511 143855560 -1733728 - MER4-int LTR ERV1 -5437 1161 1113 409 249 11 11 chr10 143855586 143855763 -1733525 + (CATA)n Simple_repeat Simple_repeat 4 180 0 2606 251 43 46 chr10 143858326 143858855 -1730433 - L1MD2 LINE L1 -3 6356 5827 2136 128 0 0 chr10 143858855 143859173 -1730115 - AluSx SINE Alu 0 318 1 2606 251 43 46 chr10 143859173 143860032 -1729256 - L1MD2 LINE L1 -532 5827 4975 240 366 46 8 chr10 143860139 143860270 -1729018 + MLT1L LTR MaLR 308 443 -172 1669 181 94 3 chr10 143860439 143860831 -1728457 + MSTA LTR MaLR 1 428 0 3601 110 54 28 chr10 143861003 143861596 -1727692 + LTR10E LTR ERV1 1 609 0 205 224 21 56 chr10 143862406 143862549 -1726739 + (TAGGG)n Simple_repeat Simple_repeat 3 140 0 2890 16 0 0 chr10 143862675 143862986 -1726302 - AluYa5 SINE Alu 0 311 1 192 329 55 0 chr10 143863639 143863712 -1725576 + MIR3 SINE MIR 116 192 -16 283 376 0 16 chr10 143864402 143864527 -1724761 + L2 LINE L2 2937 3059 -213 324 263 68 76 chr10 143865866 143866069 -1723219 - MLT1E3 LTR MaLR -224 400 138 242 282 0 0 chr10 143866449 143866559 -1722729 + (TCTCTG)n Simple_repeat Simple_repeat 1 110 0 709 177 21 14 chr10 143868474 143868664 -1720624 + AluSc SINE Alu 140 330 0 1338 254 135 16 chr10 143869649 143870102 -1719186 + MLT1E LTR MaLR 74 580 -13 541 219 144 65 chr10 143873050 143873265 -1716023 - MER106B DNA MER1_type -4 1055 1 1583 199 33 40 chr10 143875356 143875753 -1713535 - MSTD LTR MaLR -1 395 2 2358 116 0 0 chr10 143877182 143877493 -1711795 + AluSx SINE Alu 1 311 -1 257 292 66 53 chr10 143878565 143878791 -1710497 + MLT1H LTR MaLR 127 355 -194 303 28 0 0 chr10 143878992 143879028 -1710260 + (CA)n Simple_repeat Simple_repeat 2 37 0 10859 141 33 30 chr10 143879349 143879884 -1709404 + Tigger1 DNA MER2_type 404 936 -1482 414 0 0 0 chr10 143879884 143879930 -1709358 + (CA)n Simple_repeat Simple_repeat 2 47 0 10859 141 33 30 chr10 143879930 143880442 -1708846 + Tigger1 DNA MER2_type 936 1445 -973 2291 123 3 0 chr10 143880442 143880752 -1708536 + AluSq SINE Alu 1 311 -2 10859 141 33 30 chr10 143880752 143880840 -1708448 + Tigger1 DNA MER2_type 1445 1531 -887 2297 109 3 10 chr10 143880840 143881151 -1708137 + AluY SINE Alu 1 309 -2 10859 141 33 30 chr10 143881151 143882021 -1707267 + Tigger1 DNA MER2_type 1531 2418 0 924 190 77 5 chr10 143883336 143883557 -1705731 + MLT1D LTR MaLR 1 237 -268 618 212 0 0 chr10 143883592 143883870 -1705418 + (CA)n Simple_repeat Simple_repeat 1 278 0 973 198 57 16 chr10 143883878 143884141 -1705147 + MLT1D LTR MaLR 188 471 -34 216 287 30 30 chr10 143884302 143884403 -1704885 + MIR3 SINE MIR 54 154 -54 1902 113 85 25 chr10 143886034 143886388 -1702900 - THE1C LTR MaLR 0 375 1 9204 115 49 43 chr10 143886388 143887958 -1701330 - THE1C-int LTR MaLR 0 1580 1 1962 126 52 25 chr10 143887958 143888323 -1700965 - THE1C LTR MaLR 0 375 1 1867 181 89 34 chr10 143891781 143892217 -1697071 + LTR2B LTR ERV1 31 490 0 26 0 0 0 chr10 143892591 143892617 -1696671 + AT_rich Low_complexity Low_complexity 1 26 0 1198 231 42 33 chr10 143896348 143896681 -1692607 + MER7A DNA MER2_type 1 334 -12 326 316 0 0 chr10 143896690 143896769 -1692519 + MER21B LTR ERV1 17 95 -768 273 232 87 0 chr10 143896821 143896890 -1692398 + MER21B LTR ERV1 98 172 -691 1309 269 112 26 chr10 143896904 143897450 -1691838 + MER21B LTR ERV1 126 718 -145 2398 94 3 3 chr10 143899118 143899426 -1689862 + AluSc SINE Alu 2 309 0 2494 92 0 0 chr10 143906135 143906441 -1682847 + AluSg1 SINE Alu 1 306 -3 267 103 0 0 chr10 143906449 143906488 -1682800 + (GAAA)n Simple_repeat Simple_repeat 2 40 0 1888 106 55 25 chr10 143906853 143907148 -1682140 - AluSx SINE Alu 0 303 1 21 0 0 0 chr10 143907184 143907205 -1682083 + AT_rich Low_complexity Low_complexity 1 21 0 200 230 216 0 chr10 143907322 143907396 -1681892 + MIR3 SINE MIR 105 194 -14 2421 92 0 3 chr10 143908166 143908470 -1680818 - AluSq SINE Alu -10 303 1 243 346 0 0 chr10 143911080 143911158 -1678130 + (CAGAGA)n Simple_repeat Simple_repeat 4 81 0 249 286 0 0 chr10 143911502 143911677 -1677611 + (CA)n Simple_repeat Simple_repeat 1 175 0 287 308 0 0 chr10 143911741 143911972 -1677316 + (CA)n Simple_repeat Simple_repeat 1 231 0 253 270 6 6 chr10 143911984 143912162 -1677126 + (CA)n Simple_repeat Simple_repeat 1 178 0 261 286 0 0 chr10 143912208 143912383 -1676905 + (CA)n Simple_repeat Simple_repeat 1 175 0 516 270 0 2 chr10 143912433 143912875 -1676413 + (CA)n Simple_repeat Simple_repeat 1 440 0 191 185 0 19 chr10 143912892 143912946 -1676342 + (CA)n Simple_repeat Simple_repeat 2 54 0 269 340 20 20 chr10 143917011 143917155 -1672133 + MIR SINE MIR 12 154 -74 419 323 0 19 chr10 143917675 143917830 -1671458 + (TG)n Simple_repeat Simple_repeat 2 153 0 23 33 0 0 chr10 143918947 143918977 -1670311 + AT_rich Low_complexity Low_complexity 1 30 0 696 142 0 9 chr10 143920652 143920765 -1668523 + AluJb SINE Alu 175 286 -26 3560 222 34 10 chr10 143920922 143922042 -1667246 + L1MB5 LINE L1 5009 6166 -8 343 211 39 77 chr10 143922044 143922148 -1667140 + HAL1 LINE L1 1175 1274 -1233 285 311 57 5 chr10 143924512 143924791 -1664497 - L1MC4a LINE L1 -299 5822 5728 3616 173 10 3 chr10 143924848 143925540 -1663748 - L1PB4 LINE L1 -1 6155 5459 7670 194 56 15 chr10 143925540 143927404 -1661884 + L1PB3 LINE L1 3086 5026 -1120 1330 51 0 0 chr10 143927404 143927560 -1661728 + AluY SINE Alu 156 311 0 4659 154 37 14 chr10 143927567 143928708 -1660580 + L1PB3 LINE L1 5016 6177 0 3066 218 23 4 chr10 143928708 143929546 -1659742 - L1PB4 LINE L1 -743 5403 4612 398 228 47 24 chr10 143929849 143929976 -1659312 - L2 LINE L2 -5 3267 3138 469 364 75 26 chr10 143930192 143930579 -1658709 - L1M4 LINE L1 -981 5165 4760 2192 70 0 27 chr10 143932852 143933152 -1656136 - AluY SINE Alu -19 292 1 1473 293 76 26 chr10 143933385 143934116 -1655172 - MER69B DNA AcHobo -44 1182 415 433 259 45 0 chr10 143934116 143934228 -1655060 - MSTD LTR MaLR 0 396 280 2713 243 98 49 chr10 143934249 143935207 -1654081 - MSTC-int LTR MaLR -436 1299 295 796 249 61 40 chr10 143935209 143935535 -1653753 + LTR56 LTR ERV1 1 333 -112 805 239 203 0 chr10 143935643 143935894 -1653394 - MSTC-int LTR MaLR -1433 302 1 300 216 121 4 chr10 143935894 143936015 -1653273 - MSTC LTR MaLR 0 432 216 1885 221 78 0 chr10 143936029 143936440 -1652848 + MLT1A1-int LTR MaLR 1293 1735 0 548 227 5 98 chr10 143936453 143936647 -1652641 + MLT1A1 LTR MaLR 19 194 -171 411 270 35 17 chr10 143936696 143936811 -1652477 - MSTC LTR MaLR -311 117 1 556 331 103 3 chr10 143936815 143937174 -1652114 - MER69B DNA AcHobo -831 395 1 31 0 0 0 chr10 143937259 143937290 -1651998 + AT_rich Low_complexity Low_complexity 1 31 0 341 313 27 20 chr10 143937665 143937812 -1651476 - L1ME LINE L1 -450 5671 5524 2119 106 3 0 chr10 143937965 143938268 -1651020 + AluSx SINE Alu 2 305 -7 385 136 0 0 chr10 143938933 143938992 -1650296 + Alu SINE Alu 235 293 -7 1017 221 20 130 chr10 143939586 143939994 -1649294 + MLT1A1 LTR MaLR 3 365 0 269 242 0 0 chr10 143942803 143942865 -1646423 + C-rich Low_complexity Low_complexity 4 65 0 1433 199 64 46 chr10 143944300 143944439 -1644849 + MER46B DNA MER2_type 2 27 -2704 2402 57 0 3 chr10 143944439 143944737 -1644551 + AluY SINE Alu 1 297 -14 1433 199 64 46 chr10 143944737 143944943 -1644345 + MER46B DNA MER2_type 27 228 -8 26 74 0 0 chr10 143945380 143945434 -1643854 + AT_rich Low_complexity Low_complexity 1 54 0 268 302 73 36 chr10 143945824 143946010 -1643278 - MIR SINE MIR -63 145 3 204 281 0 18 chr10 143946343 143946400 -1642888 + CT-rich Low_complexity Low_complexity 3 58 0 240 375 116 14 chr10 143949524 143949740 -1639548 + MIR SINE MIR 6 243 -19 231 114 0 0 chr10 143950085 143950120 -1639168 + (CA)n Simple_repeat Simple_repeat 2 36 0 314 343 83 29 chr10 143950927 143951131 -1638157 - MIR SINE MIR -2 260 46 2460 134 69 10 chr10 143953128 143953532 -1635756 + MSTA LTR MaLR 1 428 0 2394 68 0 10 chr10 143953762 143954069 -1635219 - AluY SINE Alu -7 304 1 1016 104 0 7 chr10 143954527 143954695 -1634593 - AluSq SINE Alu 0 313 150 309 252 0 0 chr10 143959642 143959777 -1629511 + (CA)n Simple_repeat Simple_repeat 1 135 0 225 217 0 0 chr10 143960494 143960540 -1628748 - L1P3 LINE L1 -5599 862 817 1701 161 3 10 chr10 143961995 143962286 -1627002 - AluJo SINE Alu -23 289 1 802 154 7 15 chr10 143962286 143962422 -1626866 - AluJb SINE Alu -177 135 1 537 158 0 0 chr10 143969537 143969638 -1619650 + (CA)n Simple_repeat Simple_repeat 2 102 0 24 0 0 0 chr10 143969724 143969748 -1619540 + AT_rich Low_complexity Low_complexity 1 24 0 2309 159 83 28 chr10 143969861 143970294 -1618994 + MSTB2 LTR MaLR 1 457 0 253 388 41 46 chr10 143970563 143970813 -1618475 + L3 LINE CR1 1151 1400 -177 2109 115 0 10 chr10 143970813 143971125 -1618163 - AluSc SINE Alu 0 309 1 253 388 41 46 chr10 143971125 143971289 -1617999 + L3 LINE CR1 1400 1563 -14 226 330 121 33 chr10 143971545 143971818 -1617470 + L1MC/D LINE L1 5614 5910 -1898 435 319 138 15 chr10 143973031 143973617 -1615671 + L2 LINE L2 2650 3312 -1 268 378 7 14 chr10 143976516 143976664 -1612624 + L2 LINE L2 3167 3313 0 250 311 40 23 chr10 143977372 143977549 -1611739 + HAL1 LINE L1 1093 1272 -1235 204 217 43 0 chr10 143977844 143977890 -1611398 + (TATATG)n Simple_repeat Simple_repeat 4 51 0 * 432 342 88 24 chr10 143977882 143978338 -1610950 + HAL1 LINE L1 1320 1804 -703 615 203 0 22 chr10 143978692 143978785 -1610503 - MER46A DNA MER2_type -5 231 142 511 257 0 0 chr10 143978785 143978894 -1610394 + MER46A DNA MER2_type 4 112 -124 1758 147 62 27 chr10 143979419 143979711 -1609577 + AluSx SINE Alu 1 302 -10 247 146 24 0 chr10 143979911 143979952 -1609336 - MLT1H LTR MaLR -71 478 437 423 303 13 20 chr10 143979957 143980109 -1609179 + MLT1H LTR MaLR 391 541 -8 30 0 0 0 chr10 143981517 143981547 -1607741 + AT_rich Low_complexity Low_complexity 1 30 0 188 210 97 0 chr10 143982341 143982403 -1606885 - L2 LINE L2 -219 3053 2986 204 97 0 0 chr10 143982719 143982750 -1606538 + (CACCC)n Simple_repeat Simple_repeat 3 33 0 421 181 5 29 chr10 143984018 143984418 -1604870 + (CA)n Simple_repeat Simple_repeat 1 390 0 281 291 102 15 chr10 143984697 143984903 -1604385 + LTR16C LTR ERVL 97 320 -171 2285 205 112 9 chr10 143987872 143988433 -1600855 - L1MB3 LINE L1 0 6183 5565 296 320 105 41 chr10 143989895 143990258 -1599030 - L2 LINE L2 -5 3308 2923 261 0 0 0 chr10 143990418 143990447 -1598841 + (TA)n Simple_repeat Simple_repeat 2 30 0 631 188 8 0 chr10 143990452 143990608 -1598680 - FLAM_A SINE Alu 0 157 1 220 295 66 16 chr10 143991162 143991284 -1598004 - L2 LINE L2 -1216 2098 1971 381 319 55 28 chr10 143991327 143991509 -1597779 + L1ME3 LINE L1 5771 5957 -205 2200 126 0 3 chr10 143992730 143993040 -1596248 + AluSg SINE Alu 1 309 -1 888 119 12 12 chr10 143993040 143993200 -1596088 + (GGAA)n Simple_repeat Simple_repeat 1 160 0 646 234 53 24 chr10 143993734 143993943 -1595345 - MER20 DNA MER1_type -3 216 2 217 200 0 0 chr10 143996504 143996539 -1592749 + (CGG)n Simple_repeat Simple_repeat 2 36 0 299 345 89 37 chr10 143997748 143998291 -1590997 - L2 LINE L2 -2 3311 2740 225 293 73 24 chr10 143998419 143998542 -1590746 - L2 LINE L2 -1029 2285 2157 2280 184 36 37 chr10 143998622 143999395 -1589893 - L1MC2 LINE L1 -8 6336 5432 1584 252 73 11 chr10 144000597 144001133 -1588155 + MER76 LTR ERV 1 569 -119 382 267 30 58 chr10 144001210 144001589 -1587699 + Charlie7 DNA MER1_type 1721 2134 -478 5428 133 13 0 chr10 144001678 144002523 -1586765 - Tigger1 DNA MER2_type -3 2415 1560 508 99 248 0 chr10 144002510 144002596 -1586692 - Tigger1 DNA MER2_type -996 1422 1312 3256 171 96 74 chr10 144002596 144003671 -1585617 - MER52A LTR ERV1 0 1278 53 606 200 0 14 chr10 144004155 144004295 -1584993 - MER52A LTR ERV1 -1406 349 212 478 214 20 0 chr10 144004280 144004378 -1584910 - MER52A LTR ERV1 -1653 102 3 * 7633 144 7 27 chr10 144004381 144005314 -1583974 - Tigger1 DNA MER2_type -1100 1318 416 2128 130 0 0 chr10 144005314 144005630 -1583658 - AluSx SINE Alu 0 316 1 7633 144 7 27 chr10 144005630 144006039 -1583249 - Tigger1 DNA MER2_type -2002 416 1 358 194 21 0 chr10 144011780 144011873 -1577415 + L1PB2 LINE L1 6057 6151 0 194 268 169 0 chr10 144013864 144014006 -1575282 - L2 LINE L2 -267 3046 2881 226 232 14 58 chr10 144014323 144014392 -1574896 + MIR SINE MIR 81 146 -62 2388 101 0 16 chr10 144014470 144014786 -1574502 - AluSx SINE Alu -1 311 1 239 170 0 38 chr10 144015395 144015448 -1573840 + GA-rich Low_complexity Low_complexity 2 52 0 805 166 21 20 chr10 144016128 144016432 -1572856 - MER4B LTR ERV1 -1 609 261 388 149 0 15 chr10 144016432 144016499 -1572789 - MER4A LTR ERV1 -566 98 33 * 596 148 0 155 chr10 144016497 144016652 -1572636 - MER4A LTR ERV1 -162 502 372 610 124 0 10 chr10 144016704 144016801 -1572487 - MER4A LTR ERV1 -566 98 3 291 154 33 110 chr10 144017847 144017938 -1571350 + MER69 DNA AcHobo 2441 2524 -2 2652 46 0 0 chr10 144017998 144018302 -1570986 + AluY SINE Alu 1 304 -7 231 250 13 26 chr10 144018756 144018832 -1570456 + L2 LINE L2 3226 3300 -13 338 293 19 38 chr10 144018850 144018956 -1570332 - L2 LINE L2 -17 3296 3193 441 332 76 24 chr10 144019500 144019988 -1569300 + L1MEd LINE L1 566 1082 -5037 1966 126 43 13 chr10 144019988 144020289 -1568999 + AluSx SINE Alu 1 310 -2 441 332 76 24 chr10 144020289 144020300 -1568988 + L1MEd LINE L1 1082 1091 -5028 637 308 66 52 chr10 144020302 144021230 -1568058 + L1M4 LINE L1 2734 3693 -2453 2060 147 16 0 chr10 144021230 144021711 -1567577 + AluSx SINE Alu 1 486 0 637 308 66 52 chr10 144021711 144022226 -1567062 + L1M4 LINE L1 3693 4199 -1947 1105 257 36 0 chr10 144022982 144023286 -1566002 + MER33 DNA MER1_type 9 323 -1 471 266 40 29 chr10 144023873 144024046 -1565242 - MIR SINE MIR -69 193 19 957 294 44 10 chr10 144024734 144025119 -1564169 + MLT1C LTR MaLR 58 455 -12 307 265 75 7 chr10 144025455 144025602 -1563686 - L1ME4a LINE L1 -5 6116 5960 258 247 6 59 chr10 144025796 144025966 -1563322 + (TG)n Simple_repeat Simple_repeat 1 161 0 407 250 54 116 chr10 144026025 144026116 -1563172 - L1ME4a LINE L1 -160 5961 5866 2376 90 3 0 chr10 144026116 144026416 -1562872 + AluSp SINE Alu 1 301 -12 407 250 54 116 chr10 144026416 144026600 -1562688 - L1ME4a LINE L1 -255 5866 5703 2737 48 0 0 chr10 144027174 144027485 -1561803 - AluY SINE Alu 0 311 1 398 273 202 46 chr10 144027626 144027908 -1561380 - L1ME4a LINE L1 -1715 4431 4106 2184 123 7 0 chr10 144028615 144028908 -1560380 - AluSx SINE Alu -17 295 1 2917 116 70 7 chr10 144029092 144029549 -1559739 + LTR19A LTR ERV1 1 486 0 749 201 123 44 chr10 144029902 144030324 -1558964 + LTR56 LTR ERV1 9 437 0 465 281 92 7 chr10 144030330 144030611 -1558677 - L1MC5 LINE L1 -162 7799 7495 7231 250 75 45 chr10 144030637 144031344 -1557944 - L1ME1 LINE L1 -50 6911 6227 1464 178 0 34 chr10 144031344 144031642 -1557646 - L1MA5A LINE L1 -1 6296 6009 7231 250 75 45 chr10 144031642 144034182 -1555106 - L1ME1 LINE L1 -734 6227 3517 2179 116 0 0 chr10 144034182 144034474 -1554814 - AluSx SINE Alu -20 292 1 7231 250 75 45 chr10 144034474 144035251 -1554037 - L1ME1 LINE L1 -3444 3517 2765 517 189 12 134 chr10 144035301 144035465 -1553823 - L1ME4a LINE L1 -2074 4072 3929 752 287 77 23 chr10 144035487 144035926 -1553362 - L1ME1 LINE L1 -4336 2786 2324 * 1808 285 87 33 chr10 144035924 144036999 -1552289 - L1ME1 LINE L1 -4891 1532 825 260 245 8 44 chr10 144037475 144037633 -1551655 + A-rich Low_complexity Low_complexity 5 240 0 1564 125 13 4 chr10 144038138 144038370 -1550918 + MER4E LTR ERV1 85 318 -461 7670 55 5 0 chr10 144038388 144039328 -1549960 - L1PA7 LINE L1 0 6154 5213 250 206 29 15 chr10 144040919 144040987 -1548301 + MLT1A1 LTR MaLR 25 93 -272 206 210 65 16 chr10 144041591 144041715 -1547573 + (TA)n Simple_repeat Simple_repeat 2 131 0 926 29 0 0 chr10 144042316 144042421 -1546867 + L1MA1 LINE L1 6192 6296 -6 24 32 0 0 chr10 144042421 144042452 -1546836 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr10 144044636 144044665 -1544623 + AT_rich Low_complexity Low_complexity 1 29 0 261 0 0 0 chr10 144045596 144045625 -1543663 + (A)n Simple_repeat Simple_repeat 1 29 0 30 0 0 0 chr10 144045911 144045941 -1543347 + AT_rich Low_complexity Low_complexity 1 30 0 23 33 0 0 chr10 144046511 144046541 -1542747 + AT_rich Low_complexity Low_complexity 1 30 0 261 319 3 30 chr10 144047659 144047898 -1541390 + CT-rich Low_complexity Low_complexity 1 232 0 295 258 20 40 chr10 144049469 144049620 -1539668 + CT-rich Low_complexity Low_complexity 2 149 0 301 315 54 39 chr10 144049747 144050007 -1539281 + L1ME2 LINE L1 988 1251 -4868 558 274 66 47 chr10 144051066 144051428 -1537860 + L1ME2 LINE L1 2298 2666 -3463 453 297 52 27 chr10 144051768 144052169 -1537119 + L1ME2 LINE L1 4247 4657 -1472 970 245 70 54 chr10 144052195 144052836 -1536452 + L1ME2 LINE L1 4882 5521 -632 1847 187 29 13 chr10 144052986 144053361 -1535927 - MLT1B LTR MaLR -9 381 1 1318 226 124 3 chr10 144053361 144053733 -1535555 + L1ME2 LINE L1 5720 6136 -11 2319 213 67 7 chr10 144053809 144054391 -1534897 - L1MD1 LINE L1 -1 6241 5625 1184 207 23 16 chr10 144054391 144054695 -1534593 - L1MDa LINE L1 -4015 2525 2220 1371 249 52 10 chr10 144054699 144055420 -1533868 - L1MD1 LINE L1 -636 5606 4852 1614 170 98 31 chr10 144055475 144055864 -1533424 + L1MB8 LINE L1 5730 6144 -34 273 150 0 0 chr10 144055875 144055915 -1533373 - L1M4 LINE L1 -3156 2990 2951 1047 255 107 21 chr10 144055938 144056358 -1532930 - L1MD1 LINE L1 -1286 4860 4405 558 101 126 0 chr10 144056358 144056504 -1532784 - AluY SINE Alu 0 308 148 986 197 89 6 chr10 144057193 144057478 -1531810 - MLT1B LTR MaLR -12 378 6 238 350 46 21 chr10 144057658 144057852 -1531436 + L1ME1 LINE L1 331 529 -5867 422 260 80 0 chr10 144057949 144058099 -1531189 + L1ME1 LINE L1 1890 2051 -4345 557 212 100 0 chr10 144058126 144058296 -1530992 + L1ME1 LINE L1 3875 4061 -2154 2337 102 0 3 chr10 144058395 144058699 -1530589 + AluSq SINE Alu 1 303 -10 302 278 10 0 chr10 144058738 144058835 -1530453 + L1ME1 LINE L1 4787 4884 -1331 605 243 0 7 chr10 144058896 144059040 -1530248 + L1M4 LINE L1 29 171 -6371 362 207 37 1 chr10 144059045 144059149 -1530139 + L1ME1 LINE L1 5323 5422 -813 257 250 0 0 chr10 144059146 144059202 -1530086 + L1ME1 LINE L1 6102 6157 -9 * 2125 271 33 13 chr10 144059224 144059915 -1529373 + L1ME1 LINE L1 5380 6084 -151 4523 176 39 13 chr10 144059925 144060904 -1528384 + L1MB3 LINE L1 5243 6246 -6 249 263 0 0 chr10 144061762 144061819 -1527469 + (TTCA)n Simple_repeat Simple_repeat 4 60 0 193 304 89 77 chr10 144061988 144062156 -1527132 - L2 LINE L2 -237 3035 2866 907 241 120 7 chr10 144062422 144062713 -1526575 - MLT1A2 LTR MaLR -49 325 2 348 254 205 54 chr10 144064023 144064208 -1525080 + MER20 DNA MER1_type 4 216 -3 248 348 42 0 chr10 144064444 144064562 -1524726 - MIR SINE MIR -34 228 106 407 336 161 5 chr10 144064571 144064794 -1524494 - MIR SINE MIR -2 260 3 4818 217 44 26 chr10 144065032 144066556 -1522732 + L1M4 LINE L1 1532 3085 -3559 1774 234 52 47 chr10 144066658 144067325 -1521963 + L1M4 LINE L1 3122 3792 -2852 240 111 0 0 chr10 144071564 144071600 -1517688 + (TG)n Simple_repeat Simple_repeat 2 37 0 216 0 0 0 chr10 144072907 144072931 -1516357 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 250 208 0 0 chr10 144072958 144073006 -1516282 + MLT1D LTR MaLR 81 128 -377 214 274 140 38 chr10 144073816 144073973 -1515315 + MER91A DNA MER1_type 22 194 -2 477 327 45 20 chr10 144075513 144075715 -1513573 - MIR SINE MIR -35 227 21 198 103 0 0 chr10 144076654 144076683 -1512605 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 438 278 75 6 chr10 144077639 144077812 -1511476 + L1M4 LINE L1 2320 2504 -3642 550 294 86 30 chr10 144078946 144079340 -1509948 + L1MEd LINE L1 436 851 -5268 315 288 98 31 chr10 144279508 144279671 -1309617 - L1MC/D LINE L1 -2165 5643 5470 1680 148 40 7 chr10 144280000 144280278 -1309010 - AluJo SINE Alu -19 293 7 2185 115 20 0 chr10 144280312 144280608 -1308680 - AluSx SINE Alu -10 302 1 21 0 0 0 chr10 144281660 144281681 -1307607 + AT_rich Low_complexity Low_complexity 1 21 0 202 250 0 42 chr10 144282373 144282421 -1306867 - L2 LINE L2 -86 3227 3182 247 274 142 38 chr10 144282780 144282886 -1306402 - MER5A DNA MER1_type -48 141 25 1930 90 41 0 chr10 144283340 144283606 -1305682 + AluSq SINE Alu 1 277 -36 314 248 110 28 chr10 144283871 144283980 -1305308 + L1ME3A LINE L1 6008 6125 -45 672 158 114 0 chr10 144285706 144285820 -1303468 + FLAM_C SINE Alu 1 127 -6 1700 193 28 0 chr10 144287823 144288113 -1301175 - AluJo SINE Alu -14 298 1 233 320 80 0 chr10 144288129 144288279 -1301009 - L1MC/D LINE L1 -728 5436 5275 287 278 56 14 chr10 144288373 144288517 -1300771 - L1MC/D LINE L1 -873 5273 5124 486 252 163 31 chr10 144289745 144290003 -1299285 - MER21B LTR ERV1 -126 737 446 213 158 0 118 chr10 144290041 144290117 -1299171 + (CCCCAA)n Simple_repeat Simple_repeat 2 68 0 292 177 0 16 chr10 144290355 144290417 -1298871 + MER41A LTR ERV1 400 460 -94 2232 83 14 7 chr10 144290429 144290719 -1298569 + AluSq SINE Alu 6 297 -16 234 293 12 37 chr10 144290726 144290808 -1298480 - MER21B LTR ERV1 -783 80 1 570 251 157 3 chr10 144290879 144291169 -1298119 - MLT1A1 LTR MaLR -17 348 1 185 274 43 103 chr10 144292053 144292170 -1297118 + MER5B DNA MER1_type 9 118 -60 199 336 18 36 chr10 144292619 144292729 -1296559 + MIR3 SINE MIR 101 208 0 348 139 81 81 chr10 144293034 144293120 -1296168 + FRAM SINE Alu 75 160 -6 947 46 30 30 chr10 144293894 144294025 -1295263 + FLAM_C SINE Alu 1 131 -2 227 270 19 38 chr10 144295447 144295606 -1293682 + G-rich Low_complexity Low_complexity 3 158 0 22 0 0 0 chr10 144295978 144296000 -1293288 + GC_rich Low_complexity Low_complexity 1 22 0 299 256 13 0 chr10 144296541 144296619 -1292669 - MER21B-int LTR ERV1 -248 4875 4797 1489 143 105 23 chr10 144296629 144296895 -1292393 + AluJb SINE Alu 14 301 -11 637 221 24 0 chr10 144296950 144297077 -1292211 + FLAM_C SINE Alu 1 130 -3 264 220 73 28 chr10 144297113 144297222 -1292066 - PRIMA41-int LTR ERV1 -924 5834 5721 335 261 8 34 chr10 144297554 144297673 -1291615 - PRIMA41-int LTR ERV1 -4333 3423 3308 1792 108 119 11 chr10 144299029 144299297 -1289991 - AluSg SINE Alu -13 297 1 2368 84 7 0 chr10 144300254 144300551 -1288737 + AluSp SINE Alu 1 299 -14 237 188 0 0 chr10 144300632 144300680 -1288608 + L1ME2 LINE L1 5479 5526 -2259 * 809 73 0 0 chr10 144300676 144300786 -1288502 + L1P LINE L1 5129 5238 -908 292 191 0 0 chr10 144300788 144300835 -1288453 + Alu SINE Alu 7 53 -249 7398 37 16 2 chr10 144300856 144301744 -1287544 + L1PA5 LINE L1 5254 6153 -1 1416 189 125 0 chr10 144301761 144302121 -1287167 + L1ME2 LINE L1 5522 5926 -238 1118 125 5 33 chr10 144302121 144302305 -1286983 - LTR8 LTR ERV1 0 691 513 2527 76 0 0 chr10 144302314 144302616 -1286672 - AluSq SINE Alu -11 302 1 751 161 0 0 chr10 144302806 144302918 -1286370 - FLAM_C SINE Alu -25 118 7 2552 63 0 0 chr10 144303480 144303779 -1285509 + AluY SINE Alu 1 299 -12 225 0 0 0 chr10 144303779 144303804 -1285484 + (TA)n Simple_repeat Simple_repeat 2 26 0 2439 84 0 0 chr10 144304172 144304468 -1284820 + AluSq SINE Alu 1 296 -17 1697 166 75 7 chr10 144304503 144304781 -1284507 + AluJb SINE Alu 1 297 -15 469 190 66 153 chr10 144304784 144304918 -1284370 + L1MC5 LINE L1 7171 7276 -685 2452 76 0 7 chr10 144304918 144305220 -1284068 + AluSg SINE Alu 1 300 -10 469 190 66 153 chr10 144305220 144305327 -1283961 + L1MC5 LINE L1 7276 7391 -570 823 177 0 0 chr10 144305331 144305461 -1283827 + AluJo SINE Alu 1 130 -182 675 238 60 66 chr10 144305612 144305944 -1283344 + L1MC5 LINE L1 7605 7934 -27 295 310 44 9 chr10 144305979 144306092 -1283196 + HAL1 LINE L1 16 132 -2375 864 159 14 7 chr10 144306171 144306316 -1282972 + AluJo SINE Alu 137 282 -30 351 0 0 0 chr10 144306318 144306357 -1282931 + (CA)n Simple_repeat Simple_repeat 1 39 0 492 191 99 21 chr10 144306426 144306567 -1282721 - L1MA10 LINE L1 -3 6331 6180 2058 209 70 30 chr10 144306569 144307328 -1281960 - L1ME1 LINE L1 -279 5887 5097 697 192 164 0 chr10 144307329 144307475 -1281813 - MLT1D LTR MaLR 0 505 336 1826 161 0 14 chr10 144307475 144307760 -1281528 - AluJb SINE Alu -21 291 11 312 268 16 47 chr10 144307878 144308005 -1281283 + LTR67 LTR ERVL 433 555 -2 558 271 21 7 chr10 144308206 144308346 -1280942 + L2 LINE L2 3172 3313 0 254 293 111 17 chr10 144308373 144308554 -1280734 + L1 LINE L1 4232 4429 -1717 761 186 0 0 chr10 144308573 144308697 -1280591 + FLAM_A SINE Alu 13 136 -6 1533 139 35 35 chr10 144308720 144308978 -1280310 + AluJb SINE Alu 38 295 -17 228 317 29 10 chr10 144309207 144309311 -1279977 - MIR SINE MIR -25 237 132 1789 149 3 65 chr10 144309468 144309789 -1279499 - AluJb SINE Alu -11 301 1 427 276 276 4 chr10 144309974 144310231 -1279057 + L2 LINE L2 960 1286 -2028 955 193 183 11 chr10 144311435 144311804 -1277484 - LTR54 LTR ERV1 0 510 6 1924 173 3 0 chr10 144311861 144312168 -1277120 - AluJb SINE Alu -4 308 1 336 269 132 13 chr10 144312293 144312518 -1276770 + MIR SINE MIR 4 253 -9 3883 116 34 26 chr10 144313120 144313482 -1275806 + MER4E LTR ERV1 1 359 -420 2231 92 0 30 chr10 144313482 144313785 -1275503 + AluSg SINE Alu 1 294 -16 3883 116 34 26 chr10 144313785 144313976 -1275312 + MER4E LTR ERV1 359 562 -217 194 54 0 54 chr10 144313976 144314013 -1275275 + (CACCC)n Simple_repeat Simple_repeat 3 37 0 3883 116 34 26 chr10 144314013 144314106 -1275182 + MER4E LTR ERV1 562 653 -126 764 132 96 0 chr10 144314105 144314241 -1275047 - MER51A LTR ERV1 -375 259 111 * 838 69 13 126 chr10 144314243 144314289 -1274999 + MER4E LTR ERV1 626 676 -90 2469 87 3 6 chr10 144314289 144314601 -1274687 - AluSq SINE Alu -2 311 1 838 69 13 126 chr10 144314601 144314713 -1274575 + MER4E LTR ERV1 676 766 0 1917 118 46 19 chr10 144314940 144315475 -1273813 + MER51A LTR ERV1 1 634 0 4760 122 79 1 chr10 144315777 144316500 -1272788 + MER4E LTR ERV1 1 779 0 1256 134 230 0 chr10 144316527 144316766 -1272522 + AluJb SINE Alu 1 294 -8 250 341 22 11 chr10 144317460 144317551 -1271737 + MIR SINE MIR 114 205 -57 1169 131 181 8 chr10 144317565 144317825 -1271463 + MER51C LTR ERV1 53 357 -283 2192 131 0 0 chr10 144317825 144318123 -1271165 - AluSx SINE Alu -14 298 1 5214 88 13 0 chr10 144318241 144318923 -1270365 + LTR8 LTR ERV1 1 691 0 2400 162 45 0 chr10 144319061 144319481 -1269807 + MER41C LTR ERV1 1 439 -115 4685 121 18 38 chr10 144319488 144319729 -1269559 - MER4E LTR ERV1 -9 770 526 317 59 39 0 chr10 144319729 144319780 -1269508 + (TGGGGG)n Simple_repeat Simple_repeat 6 58 0 4685 121 18 38 chr10 144319780 144320324 -1268964 - MER4E LTR ERV1 -253 526 1 731 161 8 0 chr10 144320324 144320438 -1268850 + MER41B LTR ERV1 521 635 0 1505 140 19 23 chr10 144320443 144320700 -1268588 - LTR8 LTR ERV1 0 691 436 2067 138 10 0 chr10 144320708 144320998 -1268290 - AluSx SINE Alu -19 293 1 2196 93 135 3 chr10 144321011 144321344 -1267944 + MER51B LTR ERV1 1 377 0 7904 158 51 7 chr10 144321344 144321735 -1267553 + MER51B-int LTR ERV1 1 373 -7443 297 0 0 0 chr10 144321735 144321768 -1267520 + (TA)n Simple_repeat Simple_repeat 1 33 0 7904 158 51 7 chr10 144321768 144321851 -1267437 + MER51B-int LTR ERV1 373 451 -7365 2221 101 17 3 chr10 144321851 144322147 -1267141 + AluSg SINE Alu 1 300 -10 7904 158 51 7 chr10 144322147 144323100 -1266188 + MER51B-int LTR ERV1 451 1492 -6324 570 206 53 94 chr10 144323205 144323375 -1265913 + MER4A LTR ERV1 372 534 -130 5375 126 66 13 chr10 144323375 144324792 -1264496 + MER51B-int LTR ERV1 1802 3327 -4489 1895 158 57 7 chr10 144324773 144325206 -1264082 + MER51B-int LTR ERV1 1482 1892 -4054 * 189 74 0 0 chr10 144325206 144325233 -1264055 + (TG)n Simple_repeat Simple_repeat 2 28 0 2377 90 0 0 chr10 144325233 144325521 -1263767 - AluSq SINE Alu -25 288 1 1895 158 57 7 chr10 144325521 144325551 -1263737 + MER51B-int LTR ERV1 1891 3172 -2774 1818 133 5 6 chr10 144325530 144325926 -1263362 + MER51B-int LTR ERV1 2210 2649 -2568 * 7562 128 38 9 chr10 144325918 144326974 -1262314 + MER51B-int LTR ERV1 5407 6576 -961 2010 87 34 4 chr10 144326974 144327238 -1262050 + AluSg SINE Alu 39 310 0 7562 128 38 9 chr10 144327238 144327827 -1261461 + MER51B-int LTR ERV1 6576 7147 -390 681 184 22 0 chr10 144327827 144327963 -1261325 + LTR54B LTR ERV1 3 141 -357 2154 142 15 0 chr10 144327966 144328305 -1260983 + MER51B-int LTR ERV1 7472 7815 -1 2381 94 102 0 chr10 144328307 144328649 -1260639 + MER51B LTR ERV1 1 377 0 2316 167 50 16 chr10 144328653 144328695 -1260593 + MER41C LTR ERV1 1 40 -514 4771 54 0 26 chr10 144328695 144328953 -1260335 - LTR10C LTR ERV1 0 591 328 2126 97 0 0 chr10 144328953 144329220 -1260068 - AluSg SINE Alu -43 267 1 4771 54 0 26 chr10 144329220 144329568 -1259720 - LTR10C LTR ERV1 -263 328 1 2316 167 50 16 chr10 144329568 144329953 -1259335 + MER41C LTR ERV1 40 443 -111 2571 133 22 35 chr10 144329953 144330404 -1258884 - MER4E LTR ERV1 0 779 335 810 299 25 22 chr10 144330408 144330773 -1258515 + MER89-int LTR ERV1 3064 3429 -3372 331 170 63 0 chr10 144331032 144331115 -1258173 + L1M2 LINE L1 5555 5642 -536 24 53 0 0 chr10 144331866 144331904 -1257384 + AT_rich Low_complexity Low_complexity 1 38 0 400 244 11 0 chr10 144331904 144331994 -1257294 - AluJo SINE Alu -168 134 44 * 5513 178 109 103 chr10 144331991 144333474 -1255814 - MER52A LTR ERV1 -264 1491 1 2738 174 33 4 chr10 144333474 144333985 -1255303 - L1MC1 LINE L1 -174 6159 5634 3157 175 75 4 chr10 144334349 144334909 -1254379 - LTR43 LTR ERV1 -1 601 2 267 243 132 18 chr10 144335463 144335591 -1253697 + MER5A DNA MER1_type 7 162 -27 2115 97 0 3 chr10 144336104 144336392 -1252896 + AluSg SINE Alu 1 287 -23 749 164 25 0 chr10 144336402 144336524 -1252764 + FLAM_C SINE Alu 2 126 -7 606 282 11 22 chr10 144336736 144336917 -1252371 + L1ME3 LINE L1 5686 5864 -298 236 330 37 9 chr10 144337361 144337470 -1251818 - L2 LINE L2 -509 2805 2694 446 128 218 0 chr10 144337472 144337550 -1251738 - AluSq SINE Alu -151 162 68 1299 118 5 5 chr10 144337553 144337748 -1251540 - AluSg SINE Alu -115 195 1 817 248 56 98 chr10 144337774 144338439 -1250849 - L1MEd LINE L1 -4930 1189 553 2315 96 0 6 chr10 144338915 144339229 -1250059 - AluSq SINE Alu -1 312 1 2366 72 0 3 chr10 144339948 144340254 -1249034 - AluY SINE Alu -1 310 6 1908 91 51 11 chr10 144340254 144340529 -1248759 - AluSx SINE Alu -26 286 1 184 197 0 115 chr10 144340553 144340614 -1248674 - MIR SINE MIR -79 183 130 572 236 113 31 chr10 144341208 144341403 -1247885 + MLT1L LTR MaLR 350 560 -55 2270 107 0 0 chr10 144341503 144341813 -1247475 - AluSg SINE Alu 0 310 1 226 266 38 25 chr10 144341863 144341942 -1247346 - L1MD3 LINE L1 -20 7975 7896 22 0 0 0 chr10 144342451 144342473 -1246815 + AT_rich Low_complexity Low_complexity 1 22 0 429 133 0 84 chr10 144342559 144342642 -1246646 - SVA Other Other -860 526 451 1745 230 94 71 chr10 144343534 144343857 -1245431 - L1MC4 LINE L1 -18 8024 7710 1988 125 3 16 chr10 144343857 144344161 -1245127 + AluJo SINE Alu 1 300 -12 1745 230 94 71 chr10 144344161 144344610 -1244678 - L1MC4 LINE L1 -332 7710 7234 2198 107 0 0 chr10 144344863 144345162 -1244126 - AluSx SINE Alu -13 299 1 841 192 0 41 chr10 144345165 144345337 -1243951 - FRAM SINE Alu -14 162 1 2342 337 60 42 chr10 144345339 144345721 -1243567 + ERVL LTR ERVL 1302 1676 -4088 2226 98 0 3 chr10 144345721 144346026 -1243262 - AluSx SINE Alu -8 304 1 2342 337 60 42 chr10 144346026 144346390 -1242898 + ERVL LTR ERVL 1676 2032 -3732 1942 103 26 0 chr10 144346390 144346685 -1242603 - AluSx SINE Alu 0 305 4 2342 337 60 42 chr10 144346685 144347563 -1241725 + ERVL LTR ERVL 2032 2956 -2808 938 281 79 57 chr10 144347602 144347622 -1241666 + ERVL LTR ERVL 3014 3032 -2732 2178 137 44 14 chr10 144347622 144347986 -1241302 + THE1C LTR MaLR 1 375 0 938 281 79 57 chr10 144347986 144348173 -1241115 + ERVL LTR ERVL 3032 3213 -2551 699 189 0 16 chr10 144348173 144348300 -1240988 + FLAM_C SINE Alu 1 125 -8 938 281 79 57 chr10 144348300 144348583 -1240705 + ERVL LTR ERVL 3213 3516 -2248 1330 193 87 40 chr10 144348583 144348904 -1240384 + MLT1B LTR MaLR 1 336 -54 624 288 104 38 chr10 144348966 144349405 -1239883 + ERVL LTR ERVL 3512 4050 -1604 234 0 0 0 chr10 144349405 144349431 -1239857 + (TGGGGG)n Simple_repeat Simple_repeat 5 30 0 624 288 104 38 chr10 144349431 144349559 -1239729 + ERVL LTR ERVL 4050 4168 -1486 24 77 0 0 chr10 144349856 144349908 -1239380 + GC_rich Low_complexity Low_complexity 1 52 0 28 61 0 0 chr10 144350014 144350063 -1239225 + GC_rich Low_complexity Low_complexity 1 49 0 21 0 0 0 chr10 144350092 144350113 -1239175 + GC_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr10 144350179 144350214 -1239074 + GC_rich Low_complexity Low_complexity 1 35 0 2028 108 24 3 chr10 144351950 144352246 -1237042 + AluSx SINE Alu 1 302 -10 817 181 0 0 chr10 144352594 144352721 -1236567 - FLAM_C SINE Alu -6 127 1 1141 217 122 12 chr10 144353486 144353823 -1235465 + MLT1A2 LTR MaLR 1 374 0 300 255 85 32 chr10 144353913 144354007 -1235281 - L1ME4a LINE L1 -195 5926 5828 1082 232 66 69 chr10 144354100 144354493 -1234795 - L1MB1 LINE L1 0 6168 5777 1019 144 12 24 chr10 144354493 144354660 -1234628 - AluSg/x SINE Alu -16 296 132 2047 138 3 0 chr10 144355289 144355601 -1233687 - AluSq SINE Alu 0 313 1 339 25 0 0 chr10 144355620 144355660 -1233628 + (TTCC)n Simple_repeat Simple_repeat 4 43 0 1663 138 30 0 chr10 144355672 144355940 -1233348 - AluJb SINE Alu -33 279 4 1383 191 0 15 chr10 144356279 144356541 -1232747 + AluJo SINE Alu 37 294 -18 882 181 36 0 chr10 144356638 144356804 -1232484 - AluJb SINE Alu -4 308 137 299 239 111 26 chr10 144357663 144357780 -1231508 - L2 LINE L2 -10 3262 3136 1193 233 169 16 chr10 144358102 144358756 -1230532 - L1MB2 LINE L1 -2 6169 5355 227 316 94 0 chr10 144358775 144358892 -1230396 + L2 LINE L2 3125 3252 -20 1791 166 0 17 chr10 144359082 144359384 -1229904 + AluJb SINE Alu 1 297 -15 600 270 159 28 chr10 144359407 144359608 -1229680 - L1ME2 LINE L1 -10 6154 5981 2275 76 0 7 chr10 144359608 144359910 -1229378 + AluY SINE Alu 1 300 -11 600 270 159 28 chr10 144359910 144360060 -1229228 - L1ME2 LINE L1 -183 5981 5757 666 227 23 113 chr10 144360088 144360209 -1229079 - L1MD3 LINE L1 -7 7988 7900 2353 149 36 29 chr10 144360209 144360329 -1228959 - LTR56 LTR ERV1 0 445 327 1322 171 71 36 chr10 144360329 144360609 -1228679 - AluJo SINE Alu -22 290 1 2353 149 36 29 chr10 144360609 144360930 -1228358 - LTR56 LTR ERV1 -118 327 1 666 227 23 113 chr10 144360930 144361064 -1228224 - L1MD3 LINE L1 -95 7900 7756 21 0 0 0 chr10 144361305 144361326 -1227962 + GC_rich Low_complexity Low_complexity 1 21 0 862 286 123 67 chr10 144361357 144362088 -1227200 - L1MC4a LINE L1 -250 7558 6787 1943 71 100 14 chr10 144362094 144362375 -1226913 - AluY SINE Alu -6 305 1 261 325 35 0 chr10 144362527 144362641 -1226647 - HAL1b LINE L1 -971 377 260 832 149 0 30 chr10 144363085 144363219 -1226069 - FLAM_C SINE Alu -3 130 1 203 243 0 0 chr10 144363474 144363511 -1225777 + polypyrimidine Low_complexity Low_complexity 2 38 0 266 310 0 0 chr10 144364251 144364322 -1224966 - L1MC4a LINE L1 -2523 5519 5449 587 213 25 45 chr10 144364820 144365022 -1224266 - L1ME2 LINE L1 -668 5494 5297 1602 186 0 22 chr10 144365025 144365343 -1223945 - AluJb SINE Alu -1 311 1 1692 149 34 20 chr10 144365383 144365679 -1223609 + AluJb SINE Alu 1 300 -12 545 306 87 58 chr10 144365852 144366262 -1223026 - L1MEd LINE L1 -4887 1232 792 486 158 42 11 chr10 144366262 144366357 -1222931 + L1MC1 LINE L1 6236 6333 0 545 306 87 58 chr10 144366357 144366638 -1222650 - L1MEd LINE L1 -5327 792 521 2355 66 0 20 chr10 144367191 144367496 -1221792 + AluY SINE Alu 4 302 -9 250 240 40 0 chr10 144369852 144369927 -1219361 - HERVL LTR ERVL -5063 591 514 282 224 82 24 chr10 144372182 144372267 -1217021 - Tigger5 DNA MER2_type 0 2323 2234 372 283 114 78 chr10 144373805 144374173 -1215115 + L1ME4a LINE L1 3878 4264 -1882 2083 129 0 16 chr10 144374173 144374490 -1214798 + AluSx SINE Alu 1 312 0 372 283 114 78 chr10 144374490 144374542 -1214746 + L1ME4a LINE L1 4264 4313 -1833 479 314 31 4 chr10 144374752 144374978 -1214310 + L1ME4a LINE L1 4416 4647 -1499 348 296 77 47 chr10 144375836 144376110 -1213178 + L1ME4a LINE L1 5689 5970 -194 208 364 84 17 chr10 144376307 144376546 -1212742 - L2 LINE L2 -835 2479 2225 278 216 40 0 chr10 144376885 144376959 -1212329 + L1ME4a LINE L1 6042 6118 -3 335 272 45 118 chr10 144377182 144377646 -1211642 - L1ME4a LINE L1 -2 6119 5690 224 179 107 0 chr10 144377646 144377702 -1211586 + MIR SINE MIR 187 248 -14 210 407 9 0 chr10 144377946 144378054 -1211234 + MIR SINE MIR 48 156 -106 2430 102 0 0 chr10 144383570 144383883 -1205405 - AluSq SINE Alu 0 313 1 1658 242 46 74 chr10 144384331 144384596 -1204692 - L1MEc LINE L1 -3009 3932 3661 288 0 0 0 chr10 144384596 144384628 -1204660 + (TG)n Simple_repeat Simple_repeat 2 33 0 1658 242 46 74 chr10 144384628 144385142 -1204146 - L1MEc LINE L1 -3280 3661 3175 281 206 0 0 chr10 144385144 144385207 -1204081 - L1MEc LINE L1 -3991 3131 3069 1640 131 165 8 chr10 144385208 144385641 -1203647 - AluSg1 SINE Alu 0 475 1 545 221 103 62 chr10 144385641 144385698 -1203590 - L1MEc LINE L1 -4039 3083 3030 1898 144 38 3 chr10 144385698 144385990 -1203298 + AluJo SINE Alu 1 302 -10 545 221 103 62 chr10 144385990 144386222 -1203066 - L1MEc LINE L1 -4092 3030 2782 * 4838 153 34 14 chr10 144386198 144386612 -1202676 - L1PB4 LINE L1 -2 6949 6545 2398 101 0 0 chr10 144386612 144386920 -1202368 - AluY SINE Alu -3 308 1 1987 168 0 3 chr10 144386924 144387233 -1202055 - AluJb SINE Alu -4 308 1 4838 153 34 14 chr10 144387233 144387474 -1201814 - L1PB4 LINE L1 -408 6543 6308 2259 128 0 10 chr10 144387474 144387787 -1201501 - AluSx SINE Alu -2 310 1 4838 153 34 14 chr10 144387787 144388698 -1200590 - L1PB4 LINE L1 -643 6308 5350 1897 130 7 11 chr10 144388843 144389113 -1200175 - AluSx SINE Alu -11 301 33 519 321 58 7 chr10 144389151 144389425 -1199863 - L1MEc LINE L1 -4482 2640 2353 2344 224 18 5 chr10 144389425 144389983 -1199305 - L1MB8 LINE L1 0 6178 5614 547 234 71 7 chr10 144390932 144391086 -1198202 - L1MEc LINE L1 -6239 184 21 1385 117 5 0 chr10 144391086 144391253 -1198035 - AluSq SINE Alu -13 300 130 2294 112 0 0 chr10 144391253 144391547 -1197741 - AluSx SINE Alu -18 294 1 1385 117 5 0 chr10 144391547 144391567 -1197721 - AluSq SINE Alu -183 130 112 337 362 79 38 chr10 144391568 144391935 -1197353 - L1MB8 LINE L1 -778 5368 4987 21 0 0 0 chr10 144392049 144392070 -1197218 + GC_rich Low_complexity Low_complexity 1 21 0 1215 153 65 0 chr10 144393021 144393250 -1196038 - L1MB2 LINE L1 -3 6168 5925 987 208 0 28 chr10 144393253 144393465 -1195823 - L1MB2 LINE L1 -320 5851 5646 904 160 21 0 chr10 144393473 144393617 -1195671 + FRAM SINE Alu 5 151 -25 2144 200 20 24 chr10 144393621 144393945 -1195343 - L1MB2 LINE L1 -585 5598 5274 2278 129 7 0 chr10 144393945 144394255 -1195033 - AluSx SINE Alu 0 312 1 2144 200 20 24 chr10 144394255 144394698 -1194590 - L1MB2 LINE L1 -909 5274 4837 522 333 67 5 chr10 144394729 144395101 -1194187 - L1M4 LINE L1 -1087 5059 4665 489 274 19 19 chr10 144395300 144395515 -1193773 - L1MEc LINE L1 -5372 1024 810 22 0 0 0 chr10 144395515 144395537 -1193751 + AT_rich Low_complexity Low_complexity 1 22 0 322 200 29 105 chr10 144395559 144395664 -1193624 - L1MEc LINE L1 -5574 822 726 14942 207 14 16 chr10 144395669 144396045 -1193243 - L1PB1 LINE L1 -1 6866 6490 2448 70 3 3 chr10 144396045 144396343 -1192945 - AluSc SINE Alu -11 298 1 14942 207 14 16 chr10 144396343 144398928 -1190360 - L1PB1 LINE L1 -377 6490 3846 2493 92 0 0 chr10 144398928 144399234 -1190054 - AluSg SINE Alu -4 306 1 14942 207 14 16 chr10 144399234 144401126 -1188162 - L1PB1 LINE L1 -3021 3846 1950 18352 46 3 0 chr10 144401146 144404286 -1185002 - L1PA5 LINE L1 -3 6151 3006 22366 69 16 2 chr10 144404286 144407310 -1181978 - L1PA5 LINE L1 -3067 3079 13 6428 195 185 6 chr10 144407315 144407367 -1181921 - L1PB1 LINE L1 -4936 1927 1886 1682 100 35 13 chr10 144407367 144407598 -1181690 - AluSg/x SINE Alu -9 301 66 6428 195 185 6 chr10 144407598 144409169 -1180119 - L1PB1 LINE L1 -4977 1886 12 368 280 208 6 chr10 144409195 144409363 -1179925 - L1MEc LINE L1 -5627 769 568 208 339 62 9 chr10 144409438 144409550 -1179738 + MIR3 SINE MIR 62 179 -29 1314 221 28 6 chr10 144410097 144410419 -1178869 + L1MDa LINE L1 17 345 -6195 440 279 147 23 chr10 144410414 144410672 -1178616 + L1MD1 LINE L1 5341 5630 -612 * 1190 273 116 0 chr10 144410794 144411190 -1178098 + L1MD1 LINE L1 5791 6232 -10 180 0 0 0 chr10 144411293 144411313 -1177975 + (TTCC)n Simple_repeat Simple_repeat 3 22 0 433 217 8 8 chr10 144411323 144411443 -1177845 + C-rich Low_complexity Low_complexity 5 124 0 1778 173 40 0 chr10 144411459 144411759 -1177529 - AluJb SINE Alu 0 312 1 661 128 0 0 chr10 144414674 144414776 -1174512 + FRAM SINE Alu 35 136 -40 634 213 8 0 chr10 144417124 144417246 -1172042 + Charlie3 DNA MER1_type 5 127 -2583 1349 238 40 8 chr10 144417287 144417665 -1171623 - L1MB3 LINE L1 -148 6035 5646 470 211 0 98 chr10 144419418 144419512 -1169776 + MER58 DNA MER1_type 109 188 -153 1688 168 0 31 chr10 144419512 144419804 -1169484 + AluJo SINE Alu 25 307 -5 470 211 0 98 chr10 144419804 144419842 -1169446 + MER58 DNA MER1_type 188 228 -113 251 108 0 0 chr10 144419844 144419881 -1169407 + MER58 DNA MER1_type 2357 2393 -27 1670 179 0 45 chr10 144420322 144420630 -1168658 - AluJo SINE Alu -18 294 1 849 146 0 0 chr10 144422157 144422287 -1167001 + AluJ SINE Alu 2 131 -171 284 207 35 0 chr10 144422288 144422404 -1166884 + (TA)n Simple_repeat Simple_repeat 1 120 0 310 309 0 53 chr10 144422408 144422502 -1166786 - L1MC4 LINE L1 -1339 6703 6615 344 352 0 0 chr10 144422507 144422598 -1166690 + L1MC4 LINE L1 6614 6704 -1338 966 121 114 0 chr10 144422599 144422748 -1166540 + AluJ SINE Alu 129 294 -18 35 24 0 0 chr10 144425197 144425239 -1164049 + AT_rich Low_complexity Low_complexity 1 42 0 332 384 58 11 chr10 144426862 144427052 -1162236 + L1ME4a LINE L1 5688 5886 -235 345 307 16 8 chr10 144427093 144427220 -1162068 - L1M4 LINE L1 -1053 5093 4966 1612 153 24 34 chr10 144427653 144427948 -1161340 - AluJb SINE Alu -14 298 7 837 259 41 35 chr10 144427997 144428364 -1160924 - L1M4 LINE L1 -1460 4686 4318 334 250 32 24 chr10 144430982 144431106 -1158182 + G-rich Low_complexity Low_complexity 3 127 0 298 267 30 38 chr10 144432444 144432575 -1156713 - HAL1 LINE L1 -56 2451 2322 337 309 99 58 chr10 144432677 144432900 -1156388 - L1 LINE L1 -914 5232 5001 276 310 47 23 chr10 144433015 144433186 -1156102 - L1 LINE L1 -1373 4773 4599 550 135 53 15 chr10 144433201 144433334 -1155954 - LTR37A LTR ERV1 0 426 289 306 145 224 26 chr10 144435458 144435534 -1153754 + L2 LINE L2 3219 3309 -4 191 262 0 0 chr10 144436414 144436456 -1152832 - MIR SINE MIR -58 150 109 198 314 35 23 chr10 144437400 144437486 -1151802 + MER5B DNA MER1_type 40 126 -52 848 328 69 19 chr10 144438448 144439028 -1150260 - L1M4 LINE L1 -924 5222 4614 742 245 56 25 chr10 144439046 144439368 -1149920 - L1M4 LINE L1 -1621 4525 4194 503 221 25 25 chr10 144439373 144439495 -1149793 - FLAM_C SINE Alu -16 127 6 469 268 31 31 chr10 144439503 144439697 -1149591 - L1M4 LINE L1 -1942 4204 4011 1439 142 5 0 chr10 144439738 144439956 -1149332 - AluJo SINE Alu -11 301 83 267 31 0 0 chr10 144441605 144441637 -1147651 + (CCCCCA)n Simple_repeat Simple_repeat 4 35 0 249 226 16 0 chr10 144443139 144443201 -1146087 - LTR48 LTR ERV1 -40 747 685 1792 140 4 11 chr10 144443844 144444123 -1145165 - AluSx SINE Alu -24 288 12 243 280 13 0 chr10 144445470 144445545 -1143743 + MLT1D LTR MaLR 430 505 0 2181 111 3 3 chr10 144445899 144446206 -1143082 + AluSc SINE Alu 1 307 -2 255 333 65 38 chr10 144446654 144446840 -1142448 + MIR3 SINE MIR 18 208 0 298 162 50 71 chr10 144451030 144451129 -1138159 + (TCCG)n Simple_repeat Simple_repeat 2 98 0 698 223 4 0 chr10 144457117 144457382 -1131906 + (ATG)n Simple_repeat Simple_repeat 1 266 0 655 209 6 6 chr10 144457417 144457594 -1131694 + (ATGGTG)n Simple_repeat Simple_repeat 4 180 0 221 333 86 0 chr10 144457671 144457776 -1131512 - MIR SINE MIR -142 120 7 191 284 58 0 chr10 144457928 144457997 -1131291 + MIR SINE MIR 8 79 -130 378 252 72 14 chr10 144458848 144458987 -1130301 + L2 LINE L2 2932 3078 -194 345 380 98 12 chr10 144459703 144459948 -1129340 - L1MC/D LINE L1 -2018 5790 5525 261 0 0 0 chr10 144460424 144460453 -1128835 + (CCCCG)n Simple_repeat Simple_repeat 1 29 0 1111 258 134 38 chr10 144462921 144463466 -1125822 + L1MD3 LINE L1 7103 7897 -90 2293 86 0 13 chr10 144463466 144463779 -1125509 + AluSc SINE Alu 1 309 0 1111 258 134 38 chr10 144463779 144463878 -1125410 + L1MD3 LINE L1 7897 7985 -2 492 367 61 32 chr10 144466257 144466636 -1122652 + L1MC5 LINE L1 7542 7931 -30 693 159 153 23 chr10 144467121 144467297 -1121991 - MER54B LTR ERVL -48 745 547 194 356 55 55 chr10 144467763 144467909 -1121379 + MIR SINE MIR 61 206 -56 1274 226 114 8 chr10 144468791 144469273 -1120015 - MER74A LTR ERVL 0 558 26 322 176 24 0 chr10 144469297 144469382 -1119906 + (CA)n Simple_repeat Simple_repeat 1 87 0 209 223 11 32 chr10 144476963 144477057 -1112231 + (CGGGG)n Simple_repeat Simple_repeat 5 96 0 * 247 130 9 130 chr10 144476999 144477114 -1112174 + (TGGGGG)n Simple_repeat Simple_repeat 2 102 0 2166 104 0 3 chr10 144479038 144479345 -1109943 - AluY SINE Alu -5 306 1 237 48 0 159 chr10 144479762 144479970 -1109318 + (TCCC)n Simple_repeat Simple_repeat 3 177 0 21 0 0 0 chr10 144485233 144485254 -1104034 + GC_rich Low_complexity Low_complexity 1 21 0 195 100 0 0 chr10 144485568 144485598 -1103690 + (TC)n Simple_repeat Simple_repeat 2 31 0 341 180 43 65 chr10 144486029 144486168 -1103120 + G-rich Low_complexity Low_complexity 6 141 0 243 0 0 0 chr10 144486245 144486272 -1103016 + (CCCG)n Simple_repeat Simple_repeat 2 28 0 21 36 0 0 chr10 144486368 144486396 -1102892 + GC_rich Low_complexity Low_complexity 1 28 0 369 116 0 0 chr10 144486572 144486641 -1102647 + (CCCGG)n Simple_repeat Simple_repeat 4 72 0 1027 294 87 0 chr10 144487860 144488170 -1101118 - MER58B DNA MER1_type 0 341 5 279 313 116 27 chr10 144488844 144489103 -1100185 + L2 LINE L2 2467 2748 -566 259 266 63 49 chr10 144490087 144490230 -1099058 - L1MCa LINE L1 -4403 2204 2060 930 310 66 25 chr10 144490248 144491124 -1098164 - L1MCa LINE L1 -4513 1913 875 715 374 63 37 chr10 144491127 144491798 -1097490 - L1MEc LINE L1 -5451 945 258 194 224 0 61 chr10 144492113 144492162 -1097126 + MER5B DNA MER1_type 131 176 -2 255 297 81 27 chr10 144493039 144493187 -1096101 - MER5A DNA MER1_type -33 156 1 248 379 23 0 chr10 144493770 144493902 -1095386 - L2 LINE L2 -590 2724 2590 295 219 37 24 chr10 144497508 144497590 -1091698 - MER58A DNA MER1_type -24 83 1 870 165 0 0 chr10 144501262 144501432 -1087856 + (TG)n Simple_repeat Simple_repeat 2 171 0 744 191 0 0 chr10 144501463 144501741 -1087547 + (TG)n Simple_repeat Simple_repeat 1 278 0 342 287 85 0 chr10 144502208 144502337 -1086951 - MER5C DNA MER1_type 0 324 185 23 0 0 0 chr10 144504887 144504910 -1084378 + GC_rich Low_complexity Low_complexity 1 23 0 1937 159 0 0 chr10 144507056 144507352 -1081936 + AluJb SINE Alu 1 296 -16 233 153 0 122 chr10 144508960 144509058 -1080230 + G-rich Low_complexity Low_complexity 5 90 0 211 333 0 21 chr10 144509841 144509934 -1079354 + GA-rich Low_complexity Low_complexity 2 92 0 1819 176 0 7 chr10 144510529 144510825 -1078463 - AluJb SINE Alu -18 294 1 292 328 25 8 chr10 144511822 144511941 -1077347 - MIR SINE MIR -72 136 16 198 118 0 0 chr10 144511947 144511981 -1077307 + (CAGCT)n Simple_repeat Simple_repeat 1 34 0 1086 165 8 8 chr10 144515492 144515867 -1073421 + (CA)n Simple_repeat Simple_repeat 1 375 0 803 282 98 9 chr10 144516158 144516484 -1072804 + MER68 LTR ERV1 24 378 -184 202 230 11 46 chr10 144516596 144516683 -1072605 + (ACGTG)n Simple_repeat Simple_repeat 4 87 0 329 219 49 0 chr10 144516686 144516768 -1072520 + MER68 LTR ERV1 477 562 0 212 276 0 77 chr10 144518359 144518540 -1070748 + (CA)n Simple_repeat Simple_repeat 1 167 0 339 276 200 18 chr10 144519462 144519632 -1069656 + L1ME LINE L1 5571 5771 -391 254 54 0 0 chr10 144519775 144519812 -1069476 + tRNA-His-CAC tRNA tRNA 1 37 -38 1603 243 36 18 chr10 144521060 144521932 -1067356 + L1MC4a LINE L1 4927 5819 -347 248 318 48 16 chr10 144522028 144522154 -1067134 + L1MC4a LINE L1 5853 5982 -1803 455 185 7 48 chr10 144522270 144522712 -1066576 + (CACAC)n Simple_repeat Simple_repeat 1 423 0 616 335 106 11 chr10 144522712 144523113 -1066175 + L1MC4a LINE L1 6152 6568 -1240 253 255 0 0 chr10 144523970 144524021 -1065267 + L2 LINE L2 3209 3259 -13 316 342 147 5 chr10 144525306 144525496 -1063792 + MIR SINE MIR 14 230 -32 362 279 27 0 chr10 144541722 144541833 -1047455 - MER7A DNA MER2_type -232 114 3 1907 106 34 0 chr10 144541975 144542240 -1047048 - AluSx SINE Alu -38 274 1 459 307 73 56 chr10 144542484 144542787 -1046501 - L1MEc LINE L1 -5772 624 317 1534 304 78 0 chr10 144543810 144544388 -1044900 + L1MB7 LINE L1 4654 5276 -870 4579 224 128 18 chr10 144544445 144546717 -1042571 + L1MCb LINE L1 7 2562 -4002 1466 170 70 0 chr10 144546717 144546976 -1042312 - AluJo SINE Alu -18 294 18 538 171 9 63 chr10 144546983 144547019 -1042269 - AluJo SINE Alu -167 145 109 2691 94 14 3 chr10 144547019 144547379 -1041909 + THE1B LTR MaLR 1 364 0 11937 83 21 8 chr10 144547379 144547875 -1041413 + THE1B-int LTR MaLR 1 489 -1091 2252 98 9 19 chr10 144547875 144548190 -1041098 + AluSx SINE Alu 1 312 0 11937 83 21 8 chr10 144548190 144549253 -1040035 + THE1B-int LTR MaLR 489 1580 0 2527 112 14 19 chr10 144549253 144549619 -1039669 + THE1B LTR MaLR 1 364 0 538 171 9 63 chr10 144549619 144549691 -1039597 - AluJo SINE Alu -200 112 41 1556 195 26 16 chr10 144549731 144550034 -1039254 + AluJb SINE Alu 1 306 -6 2952 214 58 32 chr10 144550066 144550934 -1038354 + L1MB7 LINE L1 5295 6184 0 1076 256 83 18 chr10 144551726 144552112 -1037176 + MLT1C LTR MaLR 1 411 -56 320 297 51 46 chr10 144552199 144552394 -1036894 - MLT1A1 LTR MaLR -169 196 1 313 206 0 15 chr10 144552515 144552583 -1036705 + MLT1C LTR MaLR 485 551 -73 689 149 60 0 chr10 144552591 144552725 -1036563 - LTR8 LTR ERV1 -2 689 548 288 328 82 0 chr10 144558961 144559083 -1030205 + MIR SINE MIR 116 247 -15 234 220 0 0 chr10 144559092 144559151 -1030137 + (ATGGTG)n Simple_repeat Simple_repeat 2 60 0 605 216 0 17 chr10 144559164 144559340 -1029948 + (ATGGTG)n Simple_repeat Simple_repeat 6 178 0 293 263 75 0 chr10 144559983 144560063 -1029225 - MLT1D LTR MaLR -417 88 3 953 155 7 0 chr10 144561048 144561196 -1028092 + AluJb SINE Alu 142 290 -22 258 224 71 51 chr10 144561217 144561315 -1027973 - MLT1D LTR MaLR -398 107 8 612 254 62 86 chr10 144563278 144563696 -1025592 + MLT1C LTR MaLR 42 449 -18 3213 230 72 5 chr10 144664836 144665503 -923785 - L1 LINE L1 -1150 4996 4250 1997 122 7 3 chr10 144665503 144665789 -923499 - AluSx SINE Alu -25 287 1 3213 230 72 5 chr10 144665789 144666040 -923248 - L1 LINE L1 -1896 4250 4017 404 385 21 27 chr10 144666121 144666308 -922980 - L1 LINE L1 -1083 5063 4878 263 297 0 0 chr10 144666549 144666623 -922665 - HAL1b LINE L1 -61 1287 1214 483 311 95 3 chr10 144666665 144666980 -922308 - HAL1b LINE L1 -246 1102 759 365 218 0 58 chr10 144667110 144667298 -921990 + (TCCCG)n Simple_repeat Simple_repeat 4 180 0 202 262 0 58 chr10 144667326 144667498 -921790 + (TCCTG)n Simple_repeat Simple_repeat 4 165 0 448 293 135 0 chr10 144668098 144668306 -920982 - L2 LINE L2 -455 2859 2624 228 236 5 98 chr10 144668306 144668430 -920858 + G-rich Low_complexity Low_complexity 5 184 0 224 238 20 40 chr10 144668576 144668677 -920611 + G-rich Low_complexity Low_complexity 2 100 0 760 210 38 0 chr10 144669989 144670146 -919142 - L1MB2 LINE L1 -2 6169 6007 205 67 0 0 chr10 144672878 144672908 -916380 + (TTG)n Simple_repeat Simple_repeat 1 180 0 2110 90 11 0 chr10 144672908 144673186 -916102 - AluSx SINE Alu -1 310 1 30 0 0 0 chr10 144673207 144673237 -916051 + AT_rich Low_complexity Low_complexity 1 30 0 278 265 24 18 chr10 144674475 144674641 -914647 + (AGGTG)n Simple_repeat Simple_repeat 3 169 0 368 235 24 18 chr10 144674789 144674955 -914333 + (AGGTG)n Simple_repeat Simple_repeat 3 169 0 306 206 20 121 chr10 144675071 144675270 -914018 + G-rich Low_complexity Low_complexity 1 179 0 205 300 6 65 chr10 144675191 144675361 -913927 + GA-rich Low_complexity Low_complexity 5 164 0 * 2090 126 0 3 chr10 144677466 144677767 -911521 + AluSx SINE Alu 6 305 -7 615 295 61 25 chr10 144677987 144678329 -910959 + MLT1A1 LTR MaLR 1 361 -13 210 284 46 0 chr10 144679646 144679755 -909533 + (ACGTG)n Simple_repeat Simple_repeat 5 118 0 270 258 32 32 chr10 144679777 144679932 -909356 + (GTGTG)n Simple_repeat Simple_repeat 4 158 0 563 224 63 121 chr10 144681396 144681794 -907494 - LTR37A LTR ERV1 -6 420 46 2456 165 19 14 chr10 144681909 144682333 -906955 - MSTB LTR MaLR 0 426 1 244 116 0 0 chr10 144682347 144682390 -906898 - MSTB-int LTR MaLR -14 1637 1595 1901 259 50 35 chr10 144682581 144682629 -906659 + L1ME2 LINE L1 5149 5195 -969 2281 84 0 7 chr10 144682629 144682927 -906361 + AluY SINE Alu 1 296 -15 1901 259 50 35 chr10 144682927 144683872 -905416 + L1ME2 LINE L1 5195 6154 -10 501 333 48 14 chr10 144683905 144684112 -905176 + L1MC4 LINE L1 7826 8039 -3 208 195 24 0 chr10 144684136 144684177 -905111 + MIR3 SINE MIR 138 179 -29 2074 125 172 8 chr10 144684215 144684582 -904706 - MSTA LTR MaLR -1 427 1 283 130 0 104 chr10 144684798 144684875 -904413 + AluJo SINE Alu 83 151 -151 258 263 118 0 chr10 144685732 144685839 -903449 - MIR SINE MIR -70 138 23 960 92 0 0 chr10 144689941 144690071 -899217 + AluSg/x SINE Alu 165 294 -18 414 0 0 0 chr10 144690093 144690139 -899149 + (TAAAA)n Simple_repeat Simple_repeat 2 47 0 414 0 0 0 chr10 144690255 144690301 -898987 + (TAAAA)n Simple_repeat Simple_repeat 2 47 0 180 111 0 0 chr10 144690308 144690335 -898953 + (A)n Simple_repeat Simple_repeat 1 27 0 245 370 48 12 chr10 144692328 144692493 -896795 + MIR SINE MIR 14 184 -78 1203 158 119 63 chr10 144693992 144694277 -895011 + AluSq SINE Alu 2 302 -1 1301 149 111 62 chr10 144694284 144694572 -894716 + AluSq SINE Alu 1 302 -1 1828 142 3 16 chr10 144694585 144694895 -894393 + AluJb SINE Alu 7 312 0 22 0 0 0 chr10 144694961 144694983 -894305 + AT_rich Low_complexity Low_complexity 1 22 0 1566 109 5 0 chr10 144695103 144695324 -893964 + AluSp SINE Alu 84 305 -8 3087 205 2 8 chr10 144695514 144696123 -893165 - MSTB-int LTR MaLR -785 866 262 327 259 151 4 chr10 144696123 144696362 -892926 + L1M4 LINE L1 3341 3614 -2532 2178 245 49 17 chr10 144696472 144696825 -892463 + L1M4 LINE L1 3810 4150 -1996 3337 154 9 59 chr10 144696825 144697456 -891832 - MER4A LTR ERV1 0 600 1 2178 245 49 17 chr10 144697456 144697812 -891476 + L1M4 LINE L1 4150 4542 -1604 239 167 0 0 chr10 144697828 144697870 -891418 + L1M4 LINE L1 4501 4542 -1604 239 167 0 0 chr10 144697886 144697928 -891360 + L1M4 LINE L1 4501 4542 -1604 239 167 0 0 chr10 144697944 144697986 -891302 + L1M4 LINE L1 4501 4542 -1604 239 167 0 0 chr10 144698002 144698044 -891244 + L1M4 LINE L1 4501 4542 -1604 239 167 0 0 chr10 144698060 144698102 -891186 + L1M4 LINE L1 4501 4542 -1604 239 167 0 0 chr10 144698118 144698160 -891128 + L1M4 LINE L1 4501 4542 -1604 239 167 0 0 chr10 144698176 144698218 -891070 + L1M4 LINE L1 4501 4542 -1604 240 274 0 0 chr10 144698234 144698296 -890992 + L1M4 LINE L1 4501 4562 -1584 239 135 0 0 chr10 144698297 144698334 -890954 + L1M4 LINE L1 4506 4542 -1604 239 167 0 0 chr10 144698350 144698392 -890896 + L1M4 LINE L1 4501 4542 -1604 246 274 0 0 chr10 144698408 144698470 -890818 + L1M4 LINE L1 4501 4562 -1584 285 305 62 17 chr10 144698906 144699083 -890205 - L1ME LINE L1 -398 5766 5582 899 232 104 9 chr10 144699599 144699926 -889362 + MLT1A2 LTR MaLR 1 358 -16 355 319 120 43 chr10 144701164 144701440 -887848 + L1M4 LINE L1 5039 5335 -811 850 200 41 0 chr10 144701456 144701676 -887612 - Charlie5 DNA MER1_type 0 2624 2396 24 32 0 0 chr10 144703451 144703482 -885806 + GC_rich Low_complexity Low_complexity 1 31 0 1038 211 108 53 chr10 144705317 144705678 -883610 - MER63B DNA MER1_type -55 381 1 384 307 88 10 chr10 144706518 144706710 -882578 - L1MC5 LINE L1 -53 7908 7702 358 307 45 87 chr10 144707203 144707665 -881623 - L1M4 LINE L1 -3539 3105 2663 369 258 99 44 chr10 144707686 144707868 -881420 + MER3 DNA MER1_type 16 207 -2 566 305 74 11 chr10 144707871 144708054 -881234 - L1M4 LINE L1 -3981 2663 2466 2565 52 0 0 chr10 144708054 144708362 -880926 - AluY SINE Alu -3 308 1 1335 160 11 57 chr10 144708388 144708669 -880619 + AluJo SINE Alu 39 306 -6 720 177 57 44 chr10 144708808 144708831 -880457 + L1PB4 LINE L1 5754 5775 -381 225 0 0 0 chr10 144708831 144708856 -880432 + (TG)n Simple_repeat Simple_repeat 2 26 0 720 177 57 44 chr10 144708856 144709149 -880139 + L1PB4 LINE L1 5775 6155 -1 254 382 14 14 chr10 144709361 144709574 -879714 - HAL1b LINE L1 -740 608 393 2222 82 0 23 chr10 144709574 144709880 -879408 - AluSc SINE Alu 0 309 11 254 382 14 14 chr10 144709880 144709941 -879347 - HAL1b LINE L1 -954 394 334 2045 127 0 0 chr10 144711221 144711534 -877754 - AluSx SINE Alu 0 312 2 940 261 34 96 chr10 144711725 144712448 -876840 - L1M4 LINE L1 -4405 2239 1447 492 279 0 0 chr10 144712858 144713138 -876150 + (CA)n Simple_repeat Simple_repeat 1 280 0 488 250 0 6 chr10 144713162 144713310 -875978 + (CA)n Simple_repeat Simple_repeat 1 149 -22 2235 82 3 13 chr10 144713310 144713615 -875673 + AluSg SINE Alu 1 302 -8 488 250 0 6 chr10 144713615 144713638 -875650 + (CA)n Simple_repeat Simple_repeat 149 171 0 223 201 60 0 chr10 144715323 144715457 -873831 + (CA)n Simple_repeat Simple_repeat 2 143 0 232 305 38 0 chr10 144715476 144715581 -873707 + (CA)n Simple_repeat Simple_repeat 1 109 0 388 256 195 6 chr10 144715659 144715823 -873465 + MER3 DNA MER1_type 15 209 0 406 392 57 32 chr10 144715840 144716156 -873132 + L1 LINE L1 3611 3934 -2212 1094 227 136 17 chr10 144716165 144716696 -872592 + L1MEc LINE L1 1320 1987 -4439 799 268 46 24 chr10 144716696 144717250 -872038 + MLT1E LTR MaLR 9 577 -16 25 0 0 0 chr10 144717300 144717325 -871963 + AT_rich Low_complexity Low_complexity 1 25 0 1958 103 33 0 chr10 144717332 144717634 -871654 + AluSx SINE Alu 1 311 0 533 384 70 47 chr10 144718131 144718855 -870433 + L1 LINE L1 4062 4802 -1344 234 254 25 51 chr10 144718863 144718981 -870307 + L1M LINE L1 5255 5369 -2439 2187 96 0 26 chr10 144722004 144722316 -866972 - AluSq SINE Alu -9 304 1 241 281 0 0 chr10 144722915 144722979 -866309 + HAL1 LINE L1 2079 2142 -365 1110 141 128 70 chr10 144724446 144724759 -864529 - MER44D DNA MER2_type -8 601 1 810 162 174 12 chr10 144725058 144725225 -864063 + AluJb SINE Alu 27 220 -92 786 319 94 45 chr10 144725334 144726208 -863080 - L1ME LINE L1 -5075 995 79 757 256 34 62 chr10 144726590 144726914 -862374 - L1MC5 LINE L1 -722 7239 6925 894 166 7 0 chr10 144728915 144729060 -860228 + FRAM SINE Alu 1 146 -30 207 88 0 0 chr10 144729060 144729094 -860194 + (TTAAA)n Simple_repeat Simple_repeat 3 36 0 184 273 117 0 chr10 144730807 144730884 -858404 + MIR SINE MIR 45 130 -132 367 326 23 51 chr10 144732624 144732665 -856623 + L1M4 LINE L1 4549 4590 -1556 2307 99 0 10 chr10 144732665 144732978 -856310 - AluY SINE Alu -1 310 1 367 326 23 51 chr10 144732978 144733151 -856137 + L1M4 LINE L1 4590 4757 -1389 645 291 52 138 chr10 144733318 144733723 -855565 + L1M4 LINE L1 4943 5312 -834 1504 320 51 31 chr10 144733934 144735128 -854160 - L1MEc LINE L1 -4505 1891 674 263 243 27 0 chr10 144737575 144737649 -851639 + CT-rich Low_complexity Low_complexity 3 78 0 519 311 128 27 chr10 144737754 144738050 -851238 + L1M4c LINE L1 1077 1402 -4982 475 341 41 5 chr10 144738242 144738462 -850826 + L1M4c LINE L1 2480 2707 -3675 315 257 118 7 chr10 144738954 144739090 -850198 - L1MEc LINE L1 -5794 602 452 254 262 74 0 chr10 144739150 144739299 -849989 + L1ME1 LINE L1 2999 3158 -3224 407 76 15 30 chr10 144740540 144740606 -848682 + Alu SINE Alu 1 65 -253 695 229 100 48 chr10 144745652 144745962 -843326 + HAL1 LINE L1 2134 2459 -48 2219 241 75 11 chr10 144746956 144747699 -841589 + L1ME1 LINE L1 4593 5383 -999 851 244 171 26 chr10 144747702 144748165 -841123 + L1ME1 LINE L1 5712 6241 -161 349 278 63 0 chr10 144748397 144748523 -840765 + L1MA10 LINE L1 6178 6311 -23 1643 194 7 0 chr10 144748781 144749075 -840213 - AluJb SINE Alu -16 296 1 533 239 17 107 chr10 144751015 144751249 -838039 + AluJo SINE Alu 1 213 -99 326 154 0 0 chr10 144751249 144751301 -837987 + AluJ/FLAM SINE Alu 27 78 -224 * 336 135 0 0 chr10 144751299 144751351 -837937 + AluJ/FLAM SINE Alu 25 76 -226 1837 160 0 0 chr10 144751351 144751633 -837655 + AluSx SINE Alu 25 306 -6 206 275 75 0 chr10 144754462 144754525 -834763 - MIR SINE MIR -109 153 81 2202 85 7 0 chr10 144754525 144754820 -834468 + AluY SINE Alu 1 297 -14 206 275 75 0 chr10 144754820 144754836 -834452 - MIR SINE MIR -181 81 68 236 291 126 10 chr10 144756370 144756473 -832815 + L2 LINE L2 1636 1750 -1564 228 67 0 0 chr10 144756497 144756527 -832761 + (T)n Simple_repeat Simple_repeat 1 30 0 243 195 50 88 chr10 144756981 144757140 -832148 + (CCCTG)n Simple_repeat Simple_repeat 5 157 0 634 293 96 19 chr10 144757352 144757560 -831728 - MIR SINE MIR -36 226 3 974 69 6 0 chr10 144757778 144757937 -831351 + HERVL LTR ERVL 5349 5508 -146 261 115 49 0 chr10 144757937 144757998 -831290 + THE1B-int LTR MaLR 1517 1580 0 2219 127 51 25 chr10 144757998 144758353 -830935 + THE1B LTR MaLR 1 364 0 16522 67 4 0 chr10 144758487 144760721 -828567 - HERVL LTR ERVL -351 5303 3062 300 309 31 0 chr10 144760736 144760833 -828455 + L1ME3 LINE L1 1340 1439 -4957 327 316 253 0 chr10 144760935 144761093 -828195 + L1ME3 LINE L1 1582 1779 -4617 212 340 101 52 chr10 144762244 144762629 -826659 + L2 LINE L2 1886 2289 -1025 214 366 59 0 chr10 144762769 144762870 -826418 + L2 LINE L2 2252 2358 -956 383 272 40 40 chr10 144765305 144765430 -823858 + L1ME3 LINE L1 5335 5459 -2418 1661 259 43 53 chr10 144765433 144766150 -823138 + L1MB3 LINE L1 4788 5503 -680 3091 139 61 32 chr10 144766150 144766901 -822387 + pTR5 LTR ERV1 7 1999 -439 385 274 16 0 chr10 144766901 144767025 -822263 + LTR30 LTR ERV1 517 642 -80 1547 68 0 5 chr10 144767028 144767249 -822039 + pTR5 LTR ERV1 172 391 -2047 1758 204 131 9 chr10 144767249 144767714 -821574 + L1MB3 LINE L1 5488 6009 -162 409 278 24 24 chr10 144767909 144768078 -821210 + L1MB3 LINE L1 6005 6173 -10 288 268 89 16 chr10 144768091 144768214 -821074 + L1ME3 LINE L1 5449 5580 -655 372 339 36 55 chr10 144769261 144769371 -819917 + L1ME3 LINE L1 5734 5842 -389 2180 112 0 13 chr10 144769371 144769675 -819613 - AluSx SINE Alu -12 300 1 372 339 36 55 chr10 144769675 144769729 -819559 + L1ME3 LINE L1 5842 5895 -336 321 328 22 0 chr10 144769794 144769928 -819360 - L1ME3A LINE L1 -306 5864 5728 198 252 9 19 chr10 144770050 144770157 -819131 + (TATG)n Simple_repeat Simple_repeat 1 106 0 23 0 0 0 chr10 144770708 144770731 -818557 + AT_rich Low_complexity Low_complexity 1 23 0 2194 114 3 0 chr10 144772596 144772904 -816384 - AluSx SINE Alu -3 309 1 234 271 0 0 chr10 144774255 144774362 -814926 + (TG)n Simple_repeat Simple_repeat 1 107 0 442 262 35 12 chr10 144774401 144774573 -814715 + (TGAG)n Simple_repeat Simple_repeat 3 178 0 192 253 0 0 chr10 144774620 144774695 -814593 + (TG)n Simple_repeat Simple_repeat 2 76 0 271 295 155 0 chr10 144775123 144775252 -814036 - L1ME1 LINE L1 -5 6161 6013 2863 230 75 29 chr10 144777776 144779206 -810082 + L1MEc LINE L1 1011 2451 -3945 352 218 42 21 chr10 144779203 144779393 -809895 + L1MEc LINE L1 3071 3363 -2852 * 6851 250 47 24 chr10 144779402 144781547 -807741 + L1MC2 LINE L1 2346 4550 -1596 1337 204 111 24 chr10 144781547 144781881 -807407 + MLT1A1 LTR MaLR 3 365 0 6851 250 47 24 chr10 144781881 144782081 -807207 + L1MC2 LINE L1 4550 4744 -1402 952 229 14 5 chr10 144782092 144782310 -806978 + L1MC2 LINE L1 5756 5975 -369 210 156 0 0 chr10 144789162 144789207 -800081 + (CA)n Simple_repeat Simple_repeat 1 45 0 270 339 11 0 chr10 144789288 144789462 -799826 + (CA)n Simple_repeat Simple_repeat 2 177 0 385 256 12 19 chr10 144789503 144789663 -799625 + (CA)n Simple_repeat Simple_repeat 1 159 0 182 143 163 0 chr10 144790227 144790276 -799012 - MIR SINE MIR -193 69 13 606 211 0 9 chr10 144791209 144791318 -797970 + L1MC2 LINE L1 6236 6343 -1 454 323 81 101 chr10 144791525 144792021 -797267 + L1MEd LINE L1 718 1203 -4916 244 204 97 39 chr10 144792060 144792163 -797125 + HAL1 LINE L1 1373 1481 -1026 219 333 61 0 chr10 144792526 144792625 -796663 - L2 LINE L2 -1340 1974 1870 414 261 67 0 chr10 144793123 144793242 -796046 - MER3 DNA MER1_type -82 127 48 269 264 99 33 chr10 144794656 144794777 -794511 - MLT1B LTR MaLR -4 563 435 286 201 22 30 chr10 144795055 144795189 -794099 + GA-rich Low_complexity Low_complexity 3 135 0 454 283 41 25 chr10 144796197 144796636 -792652 + (TGGG)n Simple_repeat Simple_repeat 1 445 0 371 307 11 0 chr10 144797936 144798226 -791062 + (TG)n Simple_repeat Simple_repeat 1 293 0 420 267 0 0 chr10 144798352 144798532 -790756 + (TG)n Simple_repeat Simple_repeat 1 180 0 431 239 0 22 chr10 144798626 144798810 -790478 + (TG)n Simple_repeat Simple_repeat 1 180 0 266 250 10 0 chr10 144798875 144798979 -790309 + (TG)n Simple_repeat Simple_repeat 2 106 0 323 146 8 138 chr10 144802869 144802992 -786296 - MLT1A2 LTR MaLR -147 227 121 228 295 19 9 chr10 144810181 144810286 -779002 + L1M4 LINE L1 5117 5222 -924 628 232 58 103 chr10 144818675 144819055 -770233 - MLT1B LTR MaLR -27 363 1 25 31 0 0 chr10 144823517 144823549 -765739 + AT_rich Low_complexity Low_complexity 1 32 0 1755 141 6 38 chr10 144826694 144827014 -762274 + AluJb SINE Alu 1 310 -2 22 73 0 15 chr10 144833463 144833514 -755774 + AT_rich Low_complexity Low_complexity 1 52 -15 1603 206 0 7 chr10 144833514 144833805 -755483 + AluJb SINE Alu 1 289 -23 22 73 0 15 chr10 144833805 144833821 -755467 + AT_rich Low_complexity Low_complexity 52 67 0 310 250 19 0 chr10 144833927 144834031 -755257 - L1MB5 LINE L1 -179 5995 5890 276 355 7 0 chr10 144835996 144836134 -753154 + (TG)n Simple_repeat Simple_repeat 2 140 0 454 194 65 18 chr10 144838213 144838383 -750905 + (GAGTG)n Simple_repeat Simple_repeat 1 178 0 318 400 0 11 chr10 144840610 144840785 -748503 + (CGTG)n Simple_repeat Simple_repeat 1 173 0 * 461 363 0 0 chr10 144840664 144840843 -748445 + (TG)n Simple_repeat Simple_repeat 1 179 0 278 385 0 22 chr10 144840809 144840991 -748297 + (CGTG)n Simple_repeat Simple_repeat 1 178 0 * 434 338 0 4 chr10 144841007 144841336 -747952 + (TG)n Simple_repeat Simple_repeat 1 327 0 198 253 0 0 chr10 144841355 144841438 -747850 + (TG)n Simple_repeat Simple_repeat 1 83 0 387 258 16 4 chr10 144841923 144842174 -747114 + (TG)n Simple_repeat Simple_repeat 1 254 0 3296 240 86 44 chr10 144842177 144843358 -745930 + Tigger3b DNA MER2_type 1 1231 0 245 202 213 0 chr10 144847094 144847188 -742100 - L2 LINE L2 0 3272 3159 469 349 122 4 chr10 144847481 144848152 -741136 + L1MEd LINE L1 655 1392 -4737 1519 165 7 11 chr10 144848489 144848762 -740526 + AluJb SINE Alu 33 304 -8 425 389 0 0 chr10 144849246 144849426 -739862 + (CA)n Simple_repeat Simple_repeat 1 180 0 * 460 276 46 11 chr10 144849384 144849558 -739730 + (CATG)n Simple_repeat Simple_repeat 1 180 0 332 410 0 0 chr10 144849478 144849656 -739632 + (CA)n Simple_repeat Simple_repeat 1 178 0 * 269 304 6 0 chr10 144851748 144851916 -737372 + (TG)n Simple_repeat Simple_repeat 2 170 0 255 275 22 0 chr10 144852167 144852258 -737030 + (TG)n Simple_repeat Simple_repeat 1 93 0 201 331 19 26 chr10 144852236 144852390 -736898 + (CGTG)n Simple_repeat Simple_repeat 2 154 0 * 244 350 0 32 chr10 144852299 144852485 -736803 + (TG)n Simple_repeat Simple_repeat 1 180 0 382 173 226 8 chr10 144856357 144856490 -732798 - Charlie1 DNA MER1_type -51 2710 2549 944 321 73 18 chr10 144856670 144857324 -731964 - Charlie1a DNA MER1_type -763 692 3 1723 151 11 4 chr10 144859532 144859810 -729478 - AluJo SINE Alu -32 280 1 289 149 6 72 chr10 144860542 144860723 -728565 + GA-rich Low_complexity Low_complexity 4 172 0 211 279 0 38 chr10 144861403 144861482 -727806 + C-rich Low_complexity Low_complexity 2 77 0 1806 126 0 0 chr10 144868937 144869200 -720088 + AluSx SINE Alu 47 309 -3 189 0 0 0 chr10 144869342 144869363 -719925 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 738 178 7 0 chr10 144872710 144872845 -716443 - THE1C LTR MaLR 0 375 240 1490 77 5 5 chr10 144873212 144873432 -715856 - pTR5 LTR ERV1 -2047 391 172 379 274 16 0 chr10 144873435 144873559 -715729 - LTR30 LTR ERV1 -80 642 517 4281 129 73 76 chr10 144873559 144874530 -714758 - pTR5 LTR ERV1 -439 1999 740 612 197 231 0 chr10 144875200 144875403 -713885 - MLT1J LTR MaLR -148 363 114 2144 103 0 0 chr10 144875433 144875724 -713564 - AluSc SINE Alu -3 306 16 211 300 67 0 chr10 144877122 144877272 -712016 + (CCCCG)n Simple_repeat Simple_repeat 5 164 0 279 331 69 0 chr10 144879541 144879686 -709602 - L1MD2 LINE L1 -10 6349 6195 580 268 167 22 chr10 144880011 144880239 -709049 - L1MD2 LINE L1 -651 5708 5448 2202 89 0 3 chr10 144880242 144880535 -708753 - AluSc SINE Alu -17 292 1 211 295 7 27 chr10 144881633 144881782 -707506 + (CTGGGG)n Simple_repeat Simple_repeat 6 151 0 400 189 57 69 chr10 144886545 144886720 -702568 + C-rich Low_complexity Low_complexity 6 178 0 204 282 99 0 chr10 144886965 144887036 -702252 + MIR SINE MIR 117 194 -68 815 152 7 0 chr10 144888666 144888804 -700484 + FRAM SINE Alu 1 139 -37 629 355 116 30 chr10 144888851 144889348 -699940 - L1MEc LINE L1 -2443 3772 3319 2500 58 0 7 chr10 144889348 144889658 -699630 - AluY SINE Alu -3 308 1 629 355 116 30 chr10 144889658 144890571 -698717 - L1MEc LINE L1 -2896 3319 2139 409 249 69 17 chr10 144890774 144890947 -698341 - MLT1D LTR MaLR -2 503 322 5548 186 33 41 chr10 144891458 144891596 -697692 + L1MB1 LINE L1 4010 4148 -1998 2319 106 0 3 chr10 144891596 144891908 -697380 + AluSx SINE Alu 1 311 -1 5548 186 33 41 chr10 144891908 144893164 -696124 + L1MB1 LINE L1 4148 5393 -753 816 240 45 21 chr10 144893148 144893435 -695853 + L1MB1 LINE L1 5765 6058 -110 * 296 219 20 34 chr10 144893472 144893618 -695670 + (CTGTG)n Simple_repeat Simple_repeat 1 144 0 * 402 214 0 62 chr10 144893567 144893842 -695446 + (TG)n Simple_repeat Simple_repeat 1 257 0 381 10 0 139 chr10 144893862 144894056 -695232 + (TG)n Simple_repeat Simple_repeat 2 168 0 325 172 21 11 chr10 144894187 144894280 -695008 + G-rich Low_complexity Low_complexity 2 95 0 34 0 0 0 chr10 144897328 144897362 -691926 + AT_rich Low_complexity Low_complexity 1 34 0 714 172 0 83 chr10 144897362 144897507 -691781 - FLAM_C SINE Alu 0 133 1 213 229 0 33 chr10 144900016 144900077 -689211 + (CGGG)n Simple_repeat Simple_repeat 2 60 0 25 0 0 0 chr10 144900148 144900173 -689115 + AT_rich Low_complexity Low_complexity 1 25 0 24 0 0 0 chr10 144901296 144901320 -687968 + AT_rich Low_complexity Low_complexity 1 24 0 204 67 0 0 chr10 144901638 144901668 -687620 + (TA)n Simple_repeat Simple_repeat 1 30 0 22 0 0 0 chr10 144901669 144901691 -687597 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr10 144902979 144903010 -686278 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr10 144904238 144904259 -685029 + GC_rich Low_complexity Low_complexity 1 21 0 27 73 0 0 chr10 144904527 144904582 -684706 + GC_rich Low_complexity Low_complexity 1 55 0 25 31 0 0 chr10 144904771 144904803 -684485 + GC_rich Low_complexity Low_complexity 1 32 0 42 57 0 0 chr10 144904994 144905064 -684224 + GC_rich Low_complexity Low_complexity 1 70 0 237 193 61 18 chr10 144905096 144905210 -684078 + (CGGGG)n Simple_repeat Simple_repeat 3 121 0 23 33 0 0 chr10 144905222 144905252 -684036 + GC_rich Low_complexity Low_complexity 1 30 0 43 0 0 0 chr10 144905284 144905327 -683961 + GC_rich Low_complexity Low_complexity 1 43 0 349 122 5 89 chr10 144906144 144906760 -682528 + (TG)n Simple_repeat Simple_repeat 1 564 0 474 325 14 42 chr10 144906790 144907002 -682286 + L1MA10 LINE L1 6128 6333 -1 347 314 39 16 chr10 144906993 144907248 -682040 + L1M4 LINE L1 5091 5351 -795 * 290 289 13 40 chr10 144909307 144909459 -679829 - L1ME1 LINE L1 -165 6070 5923 1761 238 83 32 chr10 144909509 144910212 -679076 - L1ME1 LINE L1 -293 5942 5216 5291 278 91 29 chr10 144910213 144911670 -677618 - L1ME1 LINE L1 -1075 5140 3776 2355 107 0 0 chr10 144911670 144911980 -677308 - AluSg SINE Alu 0 310 1 5291 278 91 29 chr10 144911980 144912759 -676529 - L1ME1 LINE L1 -2439 3776 3047 243 0 0 0 chr10 144912759 144912786 -676502 + (TG)n Simple_repeat Simple_repeat 2 28 0 5291 278 91 29 chr10 144912786 144913755 -675533 - L1ME1 LINE L1 -3168 3047 1769 825 298 44 18 chr10 144913793 144914182 -675106 - L1ME1 LINE L1 -5994 402 4 244 298 87 0 chr10 144914187 144914291 -674997 - L1ME3A LINE L1 -31 6139 6027 294 324 67 67 chr10 144914291 144914501 -674787 + L2 LINE L2 3056 3265 -7 1155 177 10 10 chr10 144914521 144914730 -674558 - AluJb SINE Alu -20 292 84 531 281 2 0 chr10 144918692 144919287 -670001 + (CA)n Simple_repeat Simple_repeat 1 596 0 198 278 0 0 chr10 144919298 144919406 -669882 + (CA)n Simple_repeat Simple_repeat 2 109 0 271 267 117 33 chr10 144919750 144919870 -669418 - L1ME3A LINE L1 -5 6165 6036 322 271 102 27 chr10 144920255 144920480 -668808 - L1ME3A LINE L1 -633 5529 5288 369 359 54 0 chr10 144920495 144920662 -668626 - L1ME3A LINE L1 -871 5275 5100 1073 319 92 17 chr10 144921101 144922354 -666934 - L1ME3A LINE L1 -2023 4123 2782 963 126 77 4 chr10 144922419 144922635 -666653 - MSTC LTR MaLR -113 315 1 3407 251 157 37 chr10 144922640 144924177 -665111 - MSTC-int LTR MaLR -13 1722 2 2734 133 47 0 chr10 144924177 144924584 -664704 - MSTC LTR MaLR -2 426 1 1026 152 18 6 chr10 144926403 144926567 -662721 - FAM SINE Alu -9 166 1 267 165 165 0 chr10 144926851 144926942 -662346 + MER20 DNA MER1_type 6 111 -108 524 363 93 34 chr10 144929367 144929943 -659345 + L1MD1 LINE L1 2424 3045 -3101 340 239 23 0 chr10 144929998 144930086 -659202 + LTR25 LTR ERV1 273 362 -432 879 151 22 34 chr10 144930238 144930417 -658871 + MER61E LTR ERV1 342 518 -51 245 290 21 69 chr10 144932917 144933062 -656226 - L1MA10 LINE L1 -9 6325 6188 330 342 91 12 chr10 144933125 144933368 -655920 - L1MD2 LINE L1 -414 6014 5753 4378 277 59 34 chr10 144934038 144935663 -653625 - L1MD2 LINE L1 -1612 4603 3020 2107 94 0 7 chr10 144935663 144935982 -653306 - AluY SINE Alu 0 311 1 4378 277 59 34 chr10 144935982 144937926 -651362 - L1MD2 LINE L1 -3195 3020 1131 1351 276 176 31 chr10 144937929 144938850 -650438 - L1MD2 LINE L1 -5307 1089 36 1388 84 0 0 chr10 144941202 144941380 -647908 + AluSg/x SINE Alu 83 260 -50 214 250 17 0 chr10 144942377 144942437 -646851 + GA-rich Low_complexity Low_complexity 6 66 0 256 283 29 0 chr10 144948450 144948623 -640665 + (CA)n Simple_repeat Simple_repeat 1 178 0 299 295 80 9 chr10 144949011 144949123 -640165 + L2 LINE L2 2229 2348 -966 11905 149 67 9 chr10 144951253 144953530 -635758 + Tigger1 DNA MER2_type 9 2418 0 1427 179 0 30 chr10 144953595 144953858 -635430 - AluJo SINE Alu -13 299 45 202 288 34 0 chr10 144954287 144954346 -634942 + L2 LINE L2 3211 3271 -1 793 311 113 5 chr10 144955157 144955803 -633485 + L1MD1 LINE L1 3311 4026 -2120 419 201 260 7 chr10 144955819 144955973 -633315 + L1M4 LINE L1 3834 4026 -2120 1776 308 88 18 chr10 144955989 144957511 -631777 + L1ME LINE L1 3834 5459 -705 488 306 12 6 chr10 144957731 144957904 -631384 + MLT1D LTR MaLR 308 481 -24 432 95 29 29 chr10 144959245 144959350 -629938 + CT-rich Low_complexity Low_complexity 5 109 0 203 317 230 4 chr10 144960403 144960633 -628655 - L2 LINE L2 -1415 1899 1618 214 204 0 37 chr10 144961174 144961228 -628060 + (CCCCAG)n Simple_repeat Simple_repeat 1 52 0 270 81 0 0 chr10 144961443 144961480 -627808 + (TG)n Simple_repeat Simple_repeat 1 37 0 181 311 101 42 chr10 144962736 144962855 -626433 + L2 LINE L2 3106 3231 -41 211 156 26 52 chr10 144963280 144963357 -625931 + (GTGTG)n Simple_repeat Simple_repeat 5 79 0 454 163 11 63 chr10 144963369 144963559 -625729 + (GTGTG)n Simple_repeat Simple_repeat 1 180 0 218 333 143 9 chr10 144963804 144964035 -625253 - L2 LINE L2 -876 2438 2177 977 304 40 20 chr10 144964263 144965048 -624240 + L1MD1 LINE L1 5011 5825 -417 443 202 60 48 chr10 144965109 144965277 -624011 + L1MB8 LINE L1 5957 6126 -52 214 340 43 0 chr10 145167064 145167158 -422130 - L2 LINE L2 0 3272 3175 1554 275 13 11 chr10 145173268 145173737 -415551 - L1MEc LINE L1 -1559 4656 4187 1112 251 29 10 chr10 145173750 145174161 -415127 - L1MEc LINE L1 -2884 3331 2913 274 297 67 12 chr10 145175144 145175309 -413979 + (CCCCAG)n Simple_repeat Simple_repeat 6 179 0 217 235 22 67 chr10 145178197 145178376 -410912 + (CCCA)n Simple_repeat Simple_repeat 4 174 0 273 184 11 23 chr10 145184423 145184510 -404778 + C-rich Low_complexity Low_complexity 3 88 0 840 153 93 38 chr10 145186721 145186819 -402469 + Tigger1 DNA MER2_type 2223 2314 -104 2049 118 12 108 chr10 145186819 145187234 -402054 - THE1C LTR MaLR 0 375 1 840 153 93 38 chr10 145187234 145187318 -401970 + Tigger1 DNA MER2_type 2314 2415 -3 391 225 12 24 chr10 145187318 145187579 -401709 + (CA)n Simple_repeat Simple_repeat 1 257 0 2716 141 29 18 chr10 145187713 145188204 -401084 - Tigger1 DNA MER2_type -194 2224 1729 * 7000 137 41 14 chr10 145188198 145188582 -400706 - Tigger1 DNA MER2_type -1064 1354 982 2252 90 0 3 chr10 145188582 145188881 -400407 + AluSx SINE Alu 1 298 -14 7000 137 41 14 chr10 145188881 145189781 -399507 - Tigger1 DNA MER2_type -1436 982 35 495 191 14 26 chr10 145189833 145190343 -398945 + (TG)n Simple_repeat Simple_repeat 1 504 0 343 167 10 10 chr10 145190393 145190489 -398799 + (TG)n Simple_repeat Simple_repeat 2 97 0 209 135 27 0 chr10 145190988 145191025 -398263 + T-rich Low_complexity Low_complexity 2 39 0 473 275 87 31 chr10 145192063 145192463 -396825 - MLT1D LTR MaLR -38 467 5 209 186 0 0 chr10 145193281 145193324 -395964 + C-rich Low_complexity Low_complexity 6 48 0 608 306 108 52 chr10 145193517 145193867 -395421 - L1MEc LINE L1 -3930 2466 2137 2201 73 0 20 chr10 145193867 145194187 -395101 - AluY SINE Alu 0 311 1 608 306 108 52 chr10 145194187 145194495 -394793 - L1MEc LINE L1 -4259 2137 1771 358 280 13 33 chr10 145194629 145194779 -394509 - L1MEc LINE L1 -4650 1746 1600 245 193 30 30 chr10 145196213 145196379 -392909 + (CCCCG)n Simple_repeat Simple_repeat 3 168 0 359 311 23 17 chr10 145196417 145196594 -392694 + (CCCCG)n Simple_repeat Simple_repeat 2 179 0 308 317 87 10 chr10 145199046 145199150 -390138 - L1MCa LINE L1 -4317 2109 1998 505 211 0 27 chr10 145199151 145199336 -389952 + (CA)n Simple_repeat Simple_repeat 1 180 0 295 266 28 28 chr10 145200339 145200516 -388772 + (CGTG)n Simple_repeat Simple_repeat 1 177 0 341 305 23 11 chr10 145200550 145200727 -388561 + (CGTG)n Simple_repeat Simple_repeat 1 179 0 * 463 262 6 22 chr10 145200675 145200908 -388380 + (TG)n Simple_repeat Simple_repeat 1 229 0 310 188 78 0 chr10 145203723 145203787 -385501 - MER31A LTR ERV1 0 485 417 452 257 115 27 chr10 145254446 145254629 -334659 - L1MD3 LINE L1 -272 7723 7525 256 276 0 11 chr10 145254711 145254798 -334490 - MLT1F1 LTR MaLR -437 130 45 762 214 75 95 chr10 145254804 145254953 -334335 - L1MD3 LINE L1 -883 7112 6961 1627 172 0 41 chr10 145254953 145255273 -334015 - AluJo SINE Alu -5 307 1 762 214 75 95 chr10 145255273 145255469 -333819 - L1MD3 LINE L1 -1034 6961 6774 1481 200 4 7 chr10 145255489 145255769 -333519 + AluJb SINE Alu 14 292 -20 1494 92 39 0 chr10 145255779 145255985 -333303 + AluSx SINE Alu 4 217 -95 2033 111 7 7 chr10 145256002 145256300 -332988 + AluY SINE Alu 1 298 -13 369 277 71 14 chr10 145256794 145256935 -332353 + MER110A LTR ERV1 131 279 -189 180 0 0 0 chr10 145260665 145260685 -328603 + (CA)n Simple_repeat Simple_repeat 1 20 0 2401 54 0 0 chr10 145261049 145261346 -327942 - AluY SINE Alu -14 297 1 1912 93 56 0 chr10 145264646 145264914 -324374 - AluSg SINE Alu -11 299 17 577 70 0 0 chr10 145264914 145264985 -324303 - AluSq/x SINE Alu -176 136 66 1008 140 92 0 chr10 145264986 145265150 -324138 - AluSg SINE Alu -115 195 17 596 56 0 0 chr10 145265150 145265221 -324067 - AluSq/x SINE Alu -176 136 66 1223 100 83 0 chr10 145265222 145265402 -323886 - AluSg SINE Alu -115 195 1 243 271 12 59 chr10 145265688 145265773 -323515 + MIR SINE MIR 51 131 -131 864 267 59 13 chr10 145265773 145266009 -323279 + MIR SINE MIR 16 262 0 201 281 85 12 chr10 145266010 145266092 -323196 + MIR SINE MIR 175 262 0 186 134 45 30 chr10 145269072 145269139 -320149 + (TCTCTG)n Simple_repeat Simple_repeat 2 69 0 267 154 0 103 chr10 145270112 145270287 -319001 + (CACCC)n Simple_repeat Simple_repeat 1 157 0 192 148 0 99 chr10 145270299 145270400 -318888 + (CCCTG)n Simple_repeat Simple_repeat 5 95 0 228 275 43 0 chr10 145270523 145270592 -318696 + MIR3 SINE MIR 88 159 -49 438 248 17 0 chr10 145270607 145270724 -318564 + L1ME LINE L1 5582 5700 -464 1767 138 10 14 chr10 145270740 145271029 -318259 + AluJo SINE Alu 11 298 -14 2221 100 3 25 chr10 145271029 145271349 -317939 + AluSp SINE Alu 1 313 0 507 274 39 11 chr10 145271706 145271885 -317403 - MER53 DNA DNA -5 184 1 312 170 64 5 chr10 145272590 145272818 -316470 + (CA)n Simple_repeat Simple_repeat 1 241 0 198 94 19 38 chr10 145272840 145272893 -316395 + (CA)n Simple_repeat Simple_repeat 2 53 0 180 139 0 28 chr10 145273035 145273071 -316217 - MIR SINE MIR -115 147 113 214 138 0 69 chr10 145276789 145276876 -312412 + (GGCTG)n Simple_repeat Simple_repeat 4 84 0 291 232 0 68 chr10 145276900 145277090 -312198 + (CGGGG)n Simple_repeat Simple_repeat 3 179 0 * 418 197 9 60 chr10 145276950 145277284 -312004 + (GGCTG)n Simple_repeat Simple_repeat 1 316 0 361 276 6 44 chr10 145279644 145279825 -309463 + C-rich Low_complexity Low_complexity 2 175 0 1578 164 39 35 chr10 145280354 145280664 -308624 - AluJo SINE Alu -1 311 1 664 307 80 7 chr10 145282368 145282847 -306441 + L1M4 LINE L1 2445 2948 -3198 524 238 117 4 chr10 145282897 145283170 -306118 + L1M4 LINE L1 3054 3357 -2789 470 164 58 19 chr10 145283338 145283442 -305846 + FLAM_A SINE Alu 34 141 -1 2352 89 0 13 chr10 145283463 145283779 -305509 + AluSq SINE Alu 1 312 -1 308 325 51 89 chr10 145283788 145284013 -305275 + L1M4 LINE L1 3563 3784 -2362 274 77 0 0 chr10 145286187 145286226 -303062 + Alu SINE Alu 1 39 -261 2269 107 3 3 chr10 145286247 145286556 -302732 + AluSc SINE Alu 1 309 0 539 286 66 97 chr10 145286587 145287105 -302183 + Charlie4a DNA MER1_type 3 504 -4 1207 194 4 0 chr10 145289505 145289732 -299556 - AluJo SINE Alu 0 312 85 1940 163 0 0 chr10 145290021 145290316 -298972 + AluJb SINE Alu 1 295 -17 2052 128 7 0 chr10 145291335 145291632 -297656 - AluJb SINE Alu -13 299 1 2226 107 13 0 chr10 145291976 145292284 -297004 + AluSx SINE Alu 1 312 0 1655 175 10 7 chr10 145295158 145295449 -293839 + AluJb SINE Alu 9 300 -12 781 144 32 0 chr10 145295502 145295627 -293661 - AluJb SINE Alu -180 132 4 2133 80 17 0 chr10 145295993 145296280 -293008 - AluSp SINE Alu -20 293 2 312 373 93 12 chr10 145296280 145296441 -292847 - L1M4 LINE L1 -1243 4903 4730 2522 64 0 6 chr10 145296557 145296870 -292418 - AluY SINE Alu 0 311 1 186 351 64 11 chr10 145296974 145297068 -292220 + MIR SINE MIR 109 207 -55 1513 143 167 0 chr10 145298907 145299165 -290123 + AluJb SINE Alu 1 301 -1 7889 67 15 18 chr10 145299445 145300455 -288833 + LTR13 LTR ERVK 1 1007 0 202 370 133 0 chr10 145300716 145300889 -288399 + MIR SINE MIR 21 216 -46 2308 91 0 3 chr10 145301363 145301671 -287617 + AluY SINE Alu 2 308 -3 257 329 112 0 chr10 145301820 145301963 -287325 + MER20B DNA MER1_type 28 186 -597 1436 126 0 0 chr10 145302406 145302620 -286668 + AluSg/x SINE Alu 86 299 -11 379 259 56 14 chr10 145302632 145302775 -286513 - Tigger3(Golem) DNA MER2_type -55 2974 2826 805 191 21 69 chr10 145302775 145302964 -286324 + AluJo SINE Alu 94 273 -39 211 135 19 106 chr10 145303960 145304064 -285224 + C-rich Low_complexity Low_complexity 4 98 0 1652 202 3 3 chr10 145305657 145305954 -283334 - AluJo SINE Alu -15 297 1 7957 71 17 1 chr10 145308548 145309539 -279749 + LTR13 LTR ERVK 1 1007 0 2164 112 6 10 chr10 145310362 145310675 -278613 - AluSq SINE Alu 0 313 2 247 231 0 0 chr10 145310706 145310758 -278530 + LTR30 LTR ERV1 1 52 -670 1660 198 85 8 chr10 145310758 145311158 -278130 + LTR12 LTR ERV1 53 483 -231 1773 141 39 0 chr10 145311755 145312038 -277250 - AluJb SINE Alu -18 294 1 1250 126 178 63 chr10 145312488 145312631 -276657 + AluJo SINE Alu 1 126 -176 2300 95 3 0 chr10 145312631 145312937 -276351 + AluSx SINE Alu 6 312 0 1250 126 178 63 chr10 145312937 145313063 -276225 + AluJo SINE Alu 126 301 -1 275 195 23 62 chr10 145318114 145318242 -271046 + G-rich Low_complexity Low_complexity 4 126 0 2167 116 3 0 chr10 145320143 145320454 -268834 - AluJo SINE Alu 0 312 1 183 279 49 16 chr10 145320622 145320683 -268605 + MER5B DNA MER1_type 103 165 -13 324 301 35 17 chr10 145320893 145321066 -268222 + (CCCCAG)n Simple_repeat Simple_repeat 4 179 0 233 287 43 0 chr10 145321091 145321185 -268103 + (CCCCAG)n Simple_repeat Simple_repeat 4 101 0 367 282 35 23 chr10 145321210 145321384 -267904 + (CCCCAG)n Simple_repeat Simple_repeat 4 179 0 560 313 94 35 chr10 145321513 145321563 -267725 + L1MC4a LINE L1 7046 7092 -716 2202 97 0 23 chr10 145321563 145321872 -267416 + AluY SINE Alu 1 302 -9 560 313 94 35 chr10 145321872 145322256 -267032 + L1MC4a LINE L1 7092 7506 -302 416 209 9 19 chr10 145322376 145322481 -266807 + L1MD3 LINE L1 7892 7995 0 644 340 71 17 chr10 145330280 145331171 -258117 - L1 LINE L1 -1705 4441 3487 2527 36 0 3 chr10 145331171 145331473 -257815 - AluY SINE Alu -10 301 1 1165 106 18 0 chr10 145331473 145331643 -257645 - AluSg/x SINE Alu -5 305 133 474 227 0 39 chr10 145332000 145332128 -257160 - MER53 DNA DNA -65 124 2 1531 194 51 0 chr10 145332177 145332471 -256817 + AluJb SINE Alu 1 309 -3 228 271 71 0 chr10 145333403 145333488 -255800 - LTR16A1 LTR ERVL -147 310 220 323 303 101 28 chr10 145334177 145334355 -254933 - L1M4 LINE L1 -780 5366 5176 25 31 0 0 chr10 145335985 145336017 -253271 + GC_rich Low_complexity Low_complexity 1 32 0 222 127 0 95 chr10 145337048 145337111 -252177 + (CCCCAG)n Simple_repeat Simple_repeat 1 57 0 184 51 26 51 chr10 145337213 145337252 -252036 + (CCCCAG)n Simple_repeat Simple_repeat 1 38 0 369 189 32 60 chr10 145337337 145337522 -251766 + (CAGCC)n Simple_repeat Simple_repeat 1 180 0 2130 92 0 0 chr10 145337913 145338243 -251045 - AluY SINE Alu 0 330 1 2283 100 0 0 chr10 145338243 145338543 -250745 - AluY SINE Alu -11 300 1 264 264 35 35 chr10 145338553 145338640 -250648 - L1MC4 LINE L1 0 8042 7956 907 161 17 6 chr10 145338675 145338855 -250433 - MSTB1 LTR MaLR -55 377 196 1333 165 97 4 chr10 145338855 145339103 -250185 - AluJb SINE Alu -14 298 28 2052 211 35 39 chr10 145339373 145340252 -249036 - LTR13 LTR ERVK -64 943 16 1802 71 8 25 chr10 145340265 145340505 -248783 + AluY SINE Alu 57 292 -19 805 126 0 0 chr10 145340515 145340626 -248662 + AluY SINE Alu 1 111 -200 1269 81 0 240 chr10 145340626 145340985 -248303 + LTR12 LTR ERV1 1 273 -441 326 206 0 0 chr10 145341012 145341085 -248203 + LTR30 LTR ERV1 552 624 -98 648 164 41 0 chr10 145341085 145341207 -248081 + pTR5 LTR ERV1 49 175 -2263 1275 113 38 0 chr10 145341207 145341393 -247895 + AluY SINE Alu 105 297 -14 678 190 50 1 chr10 145341396 145341559 -247729 - MSTB1 LTR MaLR -234 162 4 26 0 0 0 chr10 145344077 145344103 -245185 + GC_rich Low_complexity Low_complexity 1 26 0 243 281 58 33 chr10 145346042 145346163 -243125 + HAL1 LINE L1 2080 2203 -304 297 153 12 82 chr10 145346875 145346960 -242328 + (CA)n Simple_repeat Simple_repeat 1 79 0 228 261 22 76 chr10 145347110 145347202 -242086 + L2 LINE L2 3179 3265 -7 184 206 88 59 chr10 145347205 145347273 -242015 - L3 LINE CR1 -860 717 648 2318 49 0 14 chr10 145347357 145347669 -241619 - AluY SINE Alu 0 308 1 2243 103 3 0 chr10 145347671 145347981 -241307 - AluSq SINE Alu -2 311 1 1011 209 58 26 chr10 145348013 145348282 -241006 - L1M4 LINE L1 -398 5768 5505 1931 82 89 0 chr10 145348282 145348551 -240737 - AluSc SINE Alu -15 294 2 1011 209 58 26 chr10 145348551 145348596 -240692 - L1M4 LINE L1 -661 5505 5463 1631 168 47 47 chr10 145348600 145348982 -240306 - MLT1B LTR MaLR -8 382 1 745 220 6 0 chr10 145349002 145349184 -240104 - L1M4 LINE L1 -742 5436 5254 2125 118 3 6 chr10 145349192 145349505 -239783 - AluSx SINE Alu 0 312 1 21 0 0 0 chr10 145349506 145349527 -239761 + AT_rich Low_complexity Low_complexity 1 21 0 633 189 118 6 chr10 145349528 145349697 -239591 - L1MA3 LINE L1 -1 6304 6117 639 144 93 34 chr10 145349697 145349815 -239473 + FLAM_C SINE Alu 1 125 -18 1681 168 74 100 chr10 145350358 145350788 -238500 - LTR8 LTR ERV1 0 691 272 2579 46 0 0 chr10 145350788 145351093 -238195 - AluY SINE Alu -6 305 1 1681 168 74 100 chr10 145351093 145351120 -238168 - LTR8 LTR ERV1 -419 272 246 1377 146 47 8 chr10 145351853 145352106 -237182 - LTR8 LTR ERV1 -428 263 1 1874 156 71 51 chr10 145352363 145352970 -236318 - MER4B LTR ERV1 0 779 1 2218 105 10 0 chr10 145353004 145353310 -235978 + AluSx SINE Alu 1 309 -3 2010 124 17 0 chr10 145353807 145354097 -235191 - AluSx SINE Alu -17 295 1 537 250 37 60 chr10 145357317 145357533 -231755 - L1ME LINE L1 -3653 2427 2217 540 179 57 24 chr10 145357534 145357657 -231631 + LTR50 LTR ERVL 1 127 -668 548 330 101 21 chr10 145357658 145358113 -231175 - L1ME LINE L1 -4874 1387 787 257 264 39 45 chr10 145358167 145358322 -230966 - L1M4 LINE L1 -1353 4793 4640 1082 196 79 1 chr10 145358334 145358667 -230621 - MLT1B LTR MaLR 0 390 1 388 269 156 19 chr10 145358674 145358834 -230454 - L1M4 LINE L1 -1529 4617 4436 2301 98 0 20 chr10 145358854 145359160 -230128 - AluSx SINE Alu -7 305 6 330 362 103 8 chr10 145359724 145360102 -229186 - L1M4 LINE L1 -2017 4129 3716 544 294 92 63 chr10 145360215 145360627 -228661 - HAL1 LINE L1 -1233 1274 851 210 272 19 39 chr10 145361967 145362070 -227218 + G-rich Low_complexity Low_complexity 1 101 0 541 98 0 72 chr10 145363740 145363934 -225354 + (CCCTAA)n Simple_repeat Simple_repeat 1 180 0 312 192 0 40 chr10 145363978 145364129 -225159 + (CCCTAA)n Simple_repeat Simple_repeat 1 145 0 196 179 32 24 chr10 145364165 145364288 -225000 + (CCCTAA)n Simple_repeat Simple_repeat 5 128 0 560 109 16 55 chr10 145364320 145364503 -224785 + (CCCTAA)n Simple_repeat Simple_repeat 3 178 0 574 139 7 60 chr10 145364521 145364818 -224470 + (CCCTAA)n Simple_repeat Simple_repeat 1 281 0 1479 147 44 27 chr10 145366838 145367131 -222157 - MLT1A1 LTR MaLR -56 309 12 1674 197 0 23 chr10 145367490 145367794 -221494 - AluJo SINE Alu -15 297 1 518 192 39 15 chr10 145367807 145367937 -221351 - L1ME LINE L1 -297 5824 5692 302 115 164 0 chr10 145368166 145368227 -221061 + MER31B LTR ERV1 23 93 -373 698 72 31 0 chr10 145368227 145368324 -220964 + MSTA LTR MaLR 1 100 -328 2235 152 70 24 chr10 145368324 145368878 -220410 - MER4A-int LTR ERV1 -4858 1740 1161 495 0 0 0 chr10 145368878 145368933 -220355 + (CA)n Simple_repeat Simple_repeat 2 56 0 3600 141 176 79 chr10 145368933 145369944 -219344 - MER4A-int LTR ERV1 -5489 1109 1 1700 146 23 123 chr10 145369947 145370419 -218869 - MER4A LTR ERV1 0 664 240 454 311 89 39 chr10 145370557 145370837 -218451 - L1 LINE L1 -1786 4360 4067 651 226 85 6 chr10 145371922 145372086 -217202 - MER45A DNA AcHobo -1 177 1 354 284 123 34 chr10 145372416 145372708 -216580 + L2 LINE L2 2820 3137 -176 220 313 142 17 chr10 145373045 145373221 -216067 + L2 LINE L2 2635 2832 -482 343 319 17 0 chr10 145373607 145373723 -215565 + (TCCA)n Simple_repeat Simple_repeat 3 120 0 190 311 22 0 chr10 145374505 145374595 -214693 + L2 LINE L2 2474 2565 -749 253 224 15 0 chr10 145375529 145375596 -213692 + (CAG)n Simple_repeat Simple_repeat 2 69 0 23 0 0 0 chr10 145376538 145376561 -212727 + AT_rich Low_complexity Low_complexity 1 23 0 332 236 57 0 chr10 145377064 145377170 -212118 + L1M4 LINE L1 2903 3014 -3132 227 263 85 25 chr10 145377283 145377401 -211887 + L1M4 LINE L1 4022 4146 -2000 323 274 44 0 chr10 145378224 145378359 -210929 + L1M4 LINE L1 4464 4604 -1542 3507 165 76 1 chr10 145378370 145379044 -210244 - ERVL LTR ERVL -643 5121 4398 2068 203 31 24 chr10 145379044 145379497 -209791 + HERVL74 LTR ERVL 3087 3542 -2143 11533 139 9 15 chr10 145379661 145380878 -208410 - L1PA10 LINE L1 -9 7597 6375 2152 127 3 3 chr10 145380878 145381177 -208111 - AluSc SINE Alu -10 299 1 11533 139 9 15 chr10 145381177 145382755 -206533 - L1PA10 LINE L1 -1231 6375 4794 7194 166 7 1 chr10 145382755 145384022 -205266 - L1PA10 LINE L1 -3087 4497 3223 3934 273 32 58 chr10 145384023 145385915 -203373 - L1PA10 LINE L1 -4915 2669 1 3316 208 102 14 chr10 145385919 145386731 -202557 + HERVL74 LTR ERVL 3653 4536 -1149 2454 143 19 25 chr10 145386732 145387164 -202124 + MSTB1 LTR MaLR 1 429 -3 764 220 140 44 chr10 145387193 145387443 -201845 + HERVL74 LTR ERVL 4862 5135 -550 1310 203 38 100 chr10 145387446 145387845 -201443 + MLT1A2 LTR MaLR 1 374 0 480 164 36 36 chr10 145387850 145387960 -201328 + MLT1A2-int LTR MaLR 6 115 -1620 445 69 46 46 chr10 145387972 145388059 -201229 - MER110-int LTR ERV1 -2782 3816 3730 845 136 15 56 chr10 145388139 145388337 -200951 - MER110-int LTR ERV1 -2869 3729 3540 369 218 9 45 chr10 145388426 145388536 -200752 - MER110-int LTR ERV1 -4281 2477 2372 2374 92 0 13 chr10 145388552 145389040 -200248 + AluSc SINE Alu 1 309 0 2630 122 9 29 chr10 145389120 145389564 -199724 - L1PB1 LINE L1 -57 6094 5660 401 118 0 53 chr10 145389564 145389630 -199658 + L1PB1 LINE L1 6080 6151 0 6790 119 11 10 chr10 145389659 145390627 -198661 + LTR5 LTR ERVK 1 969 0 577 335 31 43 chr10 145391043 145391677 -197611 - MER110-int LTR ERV1 -1383 6154 2365 762 83 19 0 chr10 145391907 145392015 -197273 + MLT2A2 LTR ERVL 293 402 -51 1056 131 0 0 chr10 145392118 145392333 -196955 + (TCCA)n Simple_repeat Simple_repeat 1 215 0 1806 147 6 50 chr10 145393251 145393367 -195921 + AluJb SINE Alu 5 125 -187 1913 132 7 10 chr10 145393367 145393656 -195632 - AluSc SINE Alu -21 288 1 1806 147 6 50 chr10 145393656 145393859 -195429 + AluJb SINE Alu 125 310 -2 187 388 12 0 chr10 145397988 145398068 -191220 - L2 LINE L2 -2 3311 3231 350 275 107 85 chr10 145401980 145402402 -186886 - L1M4 LINE L1 -1438 4708 4273 273 307 55 0 chr10 145403508 145403635 -185653 - L1M4 LINE L1 -2154 3992 3859 356 352 85 46 chr10 145403680 145403987 -185301 - L1M4 LINE L1 -2302 3844 3526 336 246 111 6 chr10 145404227 145404387 -184901 - L1M4 LINE L1 -4604 2534 2216 29 0 0 0 chr10 145404413 145404442 -184846 + AT_rich Low_complexity Low_complexity 1 29 0 305 48 24 0 chr10 145404453 145404495 -184793 - U7 snRNA snRNA -20 43 1 375 265 44 0 chr10 145404495 145404631 -184657 - L1M4 LINE L1 -4731 2228 2087 821 228 30 45 chr10 145404840 145405286 -184002 - L1M4 LINE L1 -4835 2124 10 472 315 108 10 chr10 145405573 145406053 -183235 - L1ME LINE L1 -385 6580 6061 2301 53 46 3 chr10 145406249 145406532 -182756 + AluY SINE Alu 1 295 -16 489 161 0 0 chr10 145406940 145407027 -182261 + (TG)n Simple_repeat Simple_repeat 2 88 0 287 325 67 28 chr10 145408827 145409082 -180206 - L1ME LINE L1 -581 5583 5319 267 159 0 0 chr10 145409295 145409339 -179949 + Alu SINE Alu 250 293 -9 1676 306 109 42 chr10 145409563 145409642 -179646 - L1ME LINE L1 -1353 4793 4721 3349 172 26 11 chr10 145409642 145410213 -179075 + LTR22 LTR ERVK 1 580 0 1676 306 109 42 chr10 145410213 145411961 -177327 - L1ME LINE L1 -1425 4721 2843 358 264 8 8 chr10 145411959 145412084 -177204 - L1MC5 LINE L1 -33 7928 7804 * 344 245 41 0 chr10 145412181 145412279 -177009 - L1ME LINE L1 -3318 2828 2727 878 149 98 4 chr10 145412337 145412545 -176743 + MER57A LTR ERV1 153 432 -2 1732 141 8 0 chr10 145412989 145413244 -176044 - AluJo SINE Alu -27 285 29 2369 234 105 55 chr10 145413248 145414081 -175207 - L1ME LINE L1 -1158 5783 4882 2329 138 25 0 chr10 145414081 145414435 -174853 + THE1B LTR MaLR 2 364 0 2369 234 105 55 chr10 145414435 145414690 -174598 - L1ME LINE L1 -2059 4882 4641 1436 193 15 15 chr10 145414704 145414973 -174315 - L1MB5 LINE L1 0 6174 5906 999 261 97 8 chr10 145414973 145415476 -173812 - L1MCc LINE L1 -4887 1536 1121 266 284 64 57 chr10 145415529 145415670 -173618 - L1MCc LINE L1 -5416 1007 866 350 337 79 32 chr10 145416581 145416833 -172455 - L1ME LINE L1 -3506 2640 2377 797 296 55 59 chr10 145416874 145417418 -171870 - L1ME3A LINE L1 -20 6150 5609 860 283 77 0 chr10 145417438 145417749 -171539 - L1ME3A LINE L1 -1299 4847 4513 199 76 76 25 chr10 145418350 145418429 -170859 + (TTATA)n Simple_repeat Simple_repeat 5 87 0 1215 148 9 14 chr10 145418474 145418691 -170597 - L1 LINE L1 -1866 4280 4065 6672 249 50 31 chr10 145418702 145420867 -168421 - L1M1 LINE L1 -4117 2615 492 2528 93 0 0 chr10 145420867 145421179 -168109 - AluSx SINE Alu 0 312 1 6672 249 50 31 chr10 145421179 145421435 -167853 - L1M1 LINE L1 -6240 492 262 1168 228 49 18 chr10 145421435 145421764 -167524 - MER44D DNA MER2_type 0 609 1 6672 249 50 31 chr10 145421764 145421860 -167428 - L1M1 LINE L1 -6470 262 169 481 292 42 14 chr10 145421863 145422257 -167031 - L1M3de LINE L1 -5212 1441 646 7185 32 0 0 chr10 145422331 145423210 -166078 - L1P1 LINE L1 -1894 4252 3374 * 9289 18 0 0 chr10 145423208 145424424 -164864 + L1P1 LINE L1 4265 5480 -675 2092 124 17 0 chr10 145425474 145425764 -163524 + AluSx SINE Alu 1 295 -17 2010 130 7 0 chr10 145426262 145426569 -162719 - AluY SINE Alu -2 309 1 397 227 184 7 chr10 145428218 145428359 -160929 + MER58B DNA MER1_type 176 341 0 3837 191 47 51 chr10 145429410 145430368 -158920 - LTR13 LTR ERVK 0 954 1 451 181 191 0 chr10 145433200 145433305 -155983 + FLAM_A SINE Alu 1 125 -8 2200 86 10 3 chr10 145433321 145433611 -155677 + AluSx SINE Alu 1 292 -20 2289 116 0 0 chr10 145433762 145434063 -155225 - AluSx SINE Alu -11 301 1 267 31 0 0 chr10 145434177 145434209 -155079 + (TG)n Simple_repeat Simple_repeat 1 32 0 949 146 39 28 chr10 145435480 145435658 -153630 - AluJb SINE Alu -56 256 77 714 184 89 0 chr10 145435660 145435828 -153460 - L1MB3 LINE L1 -53 6130 5948 421 240 32 8 chr10 145435873 145435998 -153290 + MLT1A1 LTR MaLR 24 151 -214 624 236 144 9 chr10 145436408 145436637 -152651 + MLT1A1 LTR MaLR 106 365 0 2353 93 0 6 chr10 145437930 145438243 -151045 - AluSx SINE Alu -1 311 1 304 207 35 48 chr10 145439401 145439546 -149742 + (CCCCG)n Simple_repeat Simple_repeat 5 147 0 231 36 0 0 chr10 145444713 145444741 -144547 + (ATTG)n Simple_repeat Simple_repeat 4 31 0 2219 100 0 0 chr10 145444741 145445021 -144267 - AluSx SINE Alu -32 280 1 1370 216 17 44 chr10 145445022 145445175 -144113 - Charlie1 DNA MER1_type -268 2493 2337 2305 102 3 0 chr10 145445175 145445470 -143818 - AluSp SINE Alu -17 296 1 1370 216 17 44 chr10 145445470 145445677 -143611 - Charlie1 DNA MER1_type -424 2337 2143 739 209 11 17 chr10 145445694 145445871 -143417 + AluJo SINE Alu 2 177 -135 4370 10 0 0 chr10 145445972 145446502 -142786 + L1PA2 LINE L1 5667 6196 0 258 247 118 0 chr10 145446625 145446718 -142570 + HAL1b LINE L1 862 965 -383 1083 124 70 0 chr10 145446804 145446989 -142299 + MSTB1 LTR MaLR 1 198 -234 3028 91 35 7 chr10 145446994 145447424 -141864 + MLT2A1 LTR ERVL 3 444 0 30929 114 9 14 chr10 145447424 145452165 -137123 + HERVL-A1 LTR ERVL 1 4616 -872 8024 54 9 0 chr10 145452165 145453163 -136125 + LTR13 LTR ERVK 1 1007 0 30929 114 9 14 chr10 145453163 145453875 -135413 + HERVL-A1 LTR ERVL 4616 5330 -158 2579 87 51 15 chr10 145453876 145454219 -135069 + MLT2A1 LTR ERVL 39 399 -45 207 100 0 0 chr10 145454219 145454249 -135039 + (TA)n Simple_repeat Simple_repeat 1 30 0 2579 87 51 15 chr10 145454249 145454297 -134991 + MLT2A1 LTR ERVL 399 444 0 10917 99 13 10 chr10 145454301 145455870 -133418 + THE1A-int LTR MaLR 6 1580 0 2509 88 3 25 chr10 145455870 145456233 -133055 + THE1A LTR MaLR 1 355 0 1275 129 13 22 chr10 145456255 145456479 -132809 + MSTB1 LTR MaLR 211 432 0 436 267 129 63 chr10 145457003 145457258 -132030 + HAL1b LINE L1 986 1257 -91 2050 244 82 65 chr10 145457275 145458565 -130723 - L1ME2 LINE L1 -3 6161 4824 2135 129 10 0 chr10 145458565 145458859 -130429 + AluSx SINE Alu 1 297 -15 2050 244 82 65 chr10 145458859 145459440 -129848 - L1ME2 LINE L1 -1340 4824 4254 314 244 13 13 chr10 145459474 145459552 -129736 + MLT1E3 LTR MaLR 140 217 -407 1780 176 54 17 chr10 145459552 145459904 -129384 + L1M3f LINE L1 6 370 -4958 1639 169 7 19 chr10 145460008 145460315 -128973 + L1M3f LINE L1 388 690 -4638 12487 171 58 28 chr10 145460356 145463372 -125916 + L1MA4A LINE L1 14 2938 -4007 1984 144 6 19 chr10 145463372 145463685 -125603 + AluSg SINE Alu 2 310 0 12487 171 58 28 chr10 145463685 145465476 -123812 + L1MA4A LINE L1 2938 4674 -2271 1888 167 108 5 chr10 145465476 145465865 -123423 + MSTB1 LTR MaLR 4 432 0 12487 171 58 28 chr10 145465865 145467558 -121730 + L1MA4A LINE L1 4674 6705 -240 274 154 86 37 chr10 145474125 145474287 -115001 + (CAGCC)n Simple_repeat Simple_repeat 4 173 0 1332 212 123 30 chr10 145475190 145475596 -113692 - L1MC3 LINE L1 -83 7702 7259 1338 155 78 0 chr10 145476687 145476932 -112356 - MSTA LTR MaLR 0 428 165 833 213 50 5 chr10 145477945 145478147 -111141 + MER20 DNA MER1_type 1 211 -8 2137 265 76 26 chr10 145478626 145479440 -109848 + L1ME1 LINE L1 5307 6161 -5 477 257 118 42 chr10 145479451 145479739 -109549 + L1M4 LINE L1 2948 3257 -2889 545 210 8 8 chr10 145479746 145479870 -109418 + FLAM_A SINE Alu 18 141 -1 675 288 30 24 chr10 145479870 145480200 -109088 + L1M4 LINE L1 3270 3601 -2545 3097 55 2 0 chr10 145480200 145480603 -108685 - L1PA7 LINE L1 -3 6151 5748 2392 52 5 0 chr10 145480604 145480983 -108305 + L1P3 LINE L1 5187 5567 -587 913 275 131 33 chr10 145480987 145481569 -107719 + L1M4 LINE L1 3609 4247 -1899 1742 196 178 0 chr10 145482965 145483347 -105941 + LTR47A LTR ERVL 3 452 0 2505 192 35 51 chr10 145485320 145485540 -103748 + L1MA9 LINE L1 5566 5788 -524 3326 138 35 3 chr10 145485540 145486134 -103154 + L1MA5A LINE L1 5685 6297 0 2505 192 35 51 chr10 145486134 145486579 -102709 + L1MA9 LINE L1 5788 6220 -92 237 33 0 0 chr10 145486581 145486611 -102677 + (TG)n Simple_repeat Simple_repeat 2 31 0 233 239 64 46 chr10 145487091 145487200 -102088 + MLT1H LTR MaLR 340 450 -99 307 186 186 31 chr10 145487293 145487390 -101898 + L1ME4a LINE L1 5997 6108 -13 207 0 0 0 chr10 145488730 145488753 -100535 + (TAA)n Simple_repeat Simple_repeat 2 24 0 1823 157 46 0 chr10 145488788 145489069 -100219 + AluJb SINE Alu 1 294 -18 703 213 12 0 chr10 145489123 145489283 -100005 + AluJb SINE Alu 136 297 -15 42 0 0 0 chr10 145489283 145489325 -99963 + AT_rich Low_complexity Low_complexity 1 42 0 201 39 0 0 chr10 145489325 145489351 -99937 + (TA)n Simple_repeat Simple_repeat 2 27 0 422 236 140 6 chr10 145492644 145492801 -96487 + MER45A DNA AcHobo 1 178 0 243 161 0 0 chr10 145493183 145493239 -96049 + CT-rich Low_complexity Low_complexity 2 57 0 2073 134 0 3 chr10 145494548 145494840 -94448 - AluSx SINE Alu -18 294 4 1059 218 13 0 chr10 145496308 145496631 -92657 + L1MDb LINE L1 742 1174 -5235 2134 112 3 0 chr10 145496631 145496927 -92361 + AluSx SINE Alu 1 297 -15 2728 196 41 40 chr10 145496930 145497467 -91821 + L1MB7 LINE L1 5500 6040 -144 1669 162 7 26 chr10 145497467 145497807 -91481 - AluJo SINE Alu 0 312 1 2728 196 41 40 chr10 145497807 145497952 -91336 + L1MB7 LINE L1 6040 6183 -1 1344 206 90 47 chr10 145497949 145498460 -90828 + L1MDb LINE L1 1169 1701 -4705 * 9648 164 22 24 chr10 145498462 145498917 -90371 - L1MA5 LINE L1 -2 7000 6546 2149 93 0 0 chr10 145498917 145499196 -90092 - AluSq SINE Alu -13 300 22 9648 164 22 24 chr10 145499196 145499210 -90078 - L1MA5 LINE L1 -456 6546 6533 1726 147 0 54 chr10 145499210 145499523 -89765 - AluJb SINE Alu -16 296 1 9648 164 22 24 chr10 145499523 145502284 -87004 - L1MA5 LINE L1 -469 6533 2536 504 256 58 77 chr10 145502306 145502580 -86708 + L1M4 LINE L1 3762 4030 -2116 569 305 66 8 chr10 145502790 145503046 -86242 + L1M4 LINE L1 4310 4580 -1566 211 284 10 29 chr10 145503756 145503858 -85430 + (CCCCAG)n Simple_repeat Simple_repeat 2 101 0 208 167 61 30 chr10 145503963 145504029 -85259 + L2 LINE L2 2459 2526 -788 253 408 0 0 chr10 145505805 145505979 -83309 + (TG)n Simple_repeat Simple_repeat 1 174 0 362 362 0 0 chr10 145506107 145506391 -82897 + (TG)n Simple_repeat Simple_repeat 1 284 0 206 355 37 0 chr10 145507080 145507187 -82101 - MIR SINE MIR -65 143 33 299 271 123 30 chr10 145509709 145509912 -79376 + HAL1 LINE L1 453 674 -1833 513 269 126 43 chr10 145509971 145510391 -78897 + HAL1 LINE L1 802 1256 -1251 1893 212 79 15 chr10 145510924 145511131 -78157 + L1M4 LINE L1 2572 2764 -3382 7183 99 30 10 chr10 145511131 145512118 -77170 - LTR13 LTR ERVK 0 1007 1 1893 212 79 15 chr10 145512118 145512528 -76760 + L1M4 LINE L1 2764 3229 -2917 * 2803 255 84 22 chr10 145512510 145512529 -76759 + L1ME LINE L1 1063 1079 -5136 1745 136 3 11 chr10 145512529 145512838 -76450 + AluSx SINE Alu 1 307 0 2803 255 84 22 chr10 145512838 145513306 -75982 + L1ME LINE L1 1079 1517 -4698 2212 101 0 3 chr10 145513306 145513614 -75674 - AluSx SINE Alu -5 307 1 2803 255 84 22 chr10 145513614 145514893 -74395 + L1ME LINE L1 1517 2956 -3259 672 261 79 47 chr10 145514897 145515215 -74073 + L1ME2 LINE L1 5825 6152 -12 668 314 104 17 chr10 145515238 145515718 -73570 + L1ME LINE L1 5341 5878 -353 687 239 5 55 chr10 145520200 145520418 -68870 - L1MEd LINE L1 -3653 2773 2567 528 182 58 25 chr10 145520424 145520545 -68743 + LTR50 LTR ERVL 3 127 -668 657 332 71 18 chr10 145520545 145520882 -68406 - L1MEd LINE L1 -4881 1545 1191 326 227 78 13 chr10 145520883 145521037 -68251 - L1MEd LINE L1 -5079 1337 1144 311 296 99 29 chr10 145521062 145521267 -68021 - L1M4 LINE L1 -1310 4836 4647 1575 183 171 0 chr10 145521267 145521600 -67688 - MLT1B LTR MaLR 0 390 1 311 296 99 29 chr10 145521600 145521769 -67519 - L1M4 LINE L1 -1499 4647 4436 2188 107 0 0 chr10 145521789 145522088 -67200 - AluSx SINE Alu -8 304 6 364 362 103 8 chr10 145522653 145523031 -66257 - L1M4 LINE L1 -2017 4129 3716 583 272 58 80 chr10 145523224 145523551 -65737 - HAL1 LINE L1 -1337 1170 851 224 262 19 39 chr10 145524890 145524993 -64295 + G-rich Low_complexity Low_complexity 1 101 0 216 242 0 16 chr10 145525269 145525331 -63957 + G-rich Low_complexity Low_complexity 4 64 0 218 246 0 0 chr10 145526351 145526412 -62876 + (CGG)n Simple_repeat Simple_repeat 3 63 0 535 205 41 0 chr10 145531409 145531531 -57757 + L1ME1 LINE L1 679 805 -5591 2094 117 0 23 chr10 145531531 145531840 -57448 + AluSx SINE Alu 1 302 -10 6999 14 6 0 chr10 145531840 145532687 -56601 - L1P LINE L1 -1533 4613 3762 6643 25 0 0 chr10 145532687 145533435 -55853 + L1PA3 LINE L1 5404 6155 0 268 210 145 22 chr10 145533438 145533576 -55712 + L1ME1 LINE L1 776 930 -5466 395 204 151 33 chr10 145533591 145533743 -55545 + L1ME1 LINE L1 1002 1171 -5225 293 214 48 19 chr10 145533782 145533885 -55403 + (CCCG)n Simple_repeat Simple_repeat 1 106 0 5476 148 44 85 chr10 145534353 145534902 -54386 + L1MA4 LINE L1 3796 4366 -1938 2306 93 0 3 chr10 145534902 145535213 -54075 + AluSp SINE Alu 1 310 -3 5476 148 44 85 chr10 145535213 145535852 -53436 + L1MA4 LINE L1 4366 5030 -1274 1879 106 0 0 chr10 145535852 145536108 -53180 + AluSg1 SINE Alu 44 299 -10 5476 148 44 85 chr10 145536108 145536315 -52973 + L1MA4 LINE L1 5030 5244 -1060 960 121 7 0 chr10 145536315 145536455 -52833 + FRAM SINE Alu 1 140 -36 5476 148 44 85 chr10 145536455 145537504 -51784 + L1MA4 LINE L1 5244 6303 -1 2745 234 76 33 chr10 145537489 145538345 -50943 + L1ME1 LINE L1 4462 5279 -956 * 2002 141 16 0 chr10 145538345 145538650 -50638 + AluJb SINE Alu 1 310 -2 2745 234 76 33 chr10 145538650 145539389 -49899 + L1ME1 LINE L1 5279 6131 -104 344 293 44 32 chr10 145539754 145539916 -49372 + L1MA10 LINE L1 6002 6324 -6 230 81 27 0 chr10 145540486 145540523 -48765 + (CCCCAG)n Simple_repeat Simple_repeat 6 43 0 202 271 34 0 chr10 145540947 145541006 -48282 + MIR SINE MIR 126 186 -76 1277 243 78 22 chr10 145541743 145542151 -47137 + L1MB3 LINE L1 5718 6148 -35 2385 87 3 0 chr10 145542545 145542855 -46433 - AluY SINE Alu 0 311 1 1128 107 17 11 chr10 145544350 145544527 -44761 - AluSg/x SINE Alu -11 301 124 6811 65 12 3 chr10 145544970 145544989 -44299 - LTR13 LTR ERVK -62 945 928 2392 83 0 3 chr10 145544989 145545301 -43987 + AluY SINE Alu 1 311 0 6811 65 12 3 chr10 145545301 145546218 -43070 - LTR13 LTR ERVK -79 928 1 429 244 26 9 chr10 145546828 145546943 -42345 - MER5B DNA MER1_type -41 137 21 2168 82 3 7 chr10 145547359 145547652 -41636 - AluSc SINE Alu -17 292 1 1985 110 23 3 chr10 145549007 145549306 -39982 - AluSx SINE Alu -7 305 1 2166 75 10 10 chr10 145549508 145549801 -39487 - AluSx SINE Alu -19 293 1 305 218 11 56 chr10 145550474 145550653 -38635 + C-rich Low_complexity Low_complexity 3 173 0 438 293 67 21 chr10 145551811 145552050 -37238 + HAL1 LINE L1 2080 2329 -178 430 244 28 99 chr10 145552073 145552163 -37125 + L1MC5 LINE L1 7606 7701 -260 1328 177 132 0 chr10 145552163 145552313 -36975 - AluJo SINE Alu -11 301 172 279 0 0 0 chr10 145552313 145552344 -36944 + (TG)n Simple_repeat Simple_repeat 1 31 0 1328 177 132 0 chr10 145552344 145552458 -36830 - AluJo SINE Alu -140 172 2 430 244 28 99 chr10 145552458 145552580 -36708 + L1MC5 LINE L1 7701 7803 -158 3490 219 79 75 chr10 145554002 145554247 -35041 + Charlie1a DNA MER1_type 1 243 -2518 2162 104 83 6 chr10 145554247 145554574 -34714 + L1PA13 LINE L1 5805 6156 -7 3490 219 79 75 chr10 145554574 145554704 -34584 + Charlie1a DNA MER1_type 243 371 -2390 2114 95 7 3 chr10 145554704 145554998 -34290 + AluSg SINE Alu 1 295 -15 3490 219 79 75 chr10 145554998 145555431 -33857 + Charlie1a DNA MER1_type 371 801 -1960 1886 139 3 3 chr10 145555431 145555725 -33563 - AluJo SINE Alu -18 294 1 3490 219 79 75 chr10 145555725 145555948 -33340 + Charlie1a DNA MER1_type 801 1022 -1739 2224 98 3 0 chr10 145555948 145556243 -33045 + AluSp SINE Alu 1 296 -17 3490 219 79 75 chr10 145556243 145556397 -32891 + Charlie1a DNA MER1_type 1022 1174 -1587 2224 91 7 29 chr10 145556397 145556704 -32584 + AluSx SINE Alu 1 300 -12 3490 219 79 75 chr10 145556704 145556840 -32448 + Charlie1a DNA MER1_type 1174 1335 -1426 2408 68 0 0 chr10 145556840 145557134 -32154 + AluY SINE Alu 1 294 -17 3490 219 79 75 chr10 145557134 145557227 -32061 + Charlie1a DNA MER1_type 1335 1426 -29 2265 82 3 7 chr10 145557405 145557708 -31580 - AluSq SINE Alu -11 302 1 824 184 25 25 chr10 145558887 145559045 -30243 - AluJb SINE Alu -6 306 149 2112 133 0 9 chr10 145559082 145559397 -29891 - AluSx SINE Alu 0 312 1 1119 96 57 0 chr10 145559523 145559680 -29608 - AluSq SINE Alu -21 292 127 2286 105 0 0 chr10 145559914 145560218 -29070 - AluSx SINE Alu -8 304 1 320 259 61 38 chr10 145560403 145560534 -28754 + MIR SINE MIR 74 207 -55 2210 116 0 6 chr10 145561709 145562020 -27268 - AluSg SINE Alu -1 309 1 608 116 25 70 chr10 145563647 145564145 -25143 + (TCTCTG)n Simple_repeat Simple_repeat 1 475 0 207 170 43 0 chr10 145564150 145564197 -25091 + (TCTG)n Simple_repeat Simple_repeat 2 50 0 349 333 11 17 chr10 145564516 145564693 -24595 + (CGTG)n Simple_repeat Simple_repeat 2 177 0 375 236 0 0 chr10 145565243 145565404 -23884 + (TG)n Simple_repeat Simple_repeat 2 162 0 2222 97 13 0 chr10 145567485 145567784 -21504 - AluSg SINE Alu -7 303 1 2021 115 3 0 chr10 145569659 145569954 -19334 - AluSg SINE Alu -14 296 1 263 142 11 77 chr10 145571068 145571251 -18037 + (CA)n Simple_repeat Simple_repeat 2 172 0 250 241 30 38 chr10 145571268 145571401 -17887 + (CA)n Simple_repeat Simple_repeat 2 133 0 444 244 0 59 chr10 145573563 145573602 -15686 - L1MC4 LINE L1 -1316 6726 6686 2351 71 0 3 chr10 145573602 145573897 -15391 + AluSg SINE Alu 1 294 -16 444 244 0 59 chr10 145573897 145573976 -15312 - L1MC4 LINE L1 -1356 6686 6615 415 269 0 11 chr10 145573901 145573994 -15294 + L1MC4 LINE L1 6614 6705 -1337 * 300 186 0 51 chr10 145573944 145574003 -15285 - L1MC4 LINE L1 -1340 6702 6647 * 225 192 19 0 chr10 145574553 145574605 -14683 + (CAGCC)n Simple_repeat Simple_repeat 5 57 0 883 83 8 0 chr10 145579173 145579293 -9995 + AluSg/x SINE Alu 164 284 -26 1086 220 23 11 chr10 145579293 145579557 -9731 + L1ME1 LINE L1 5895 6161 -5 326 280 8 42 chr10 145579586 145579820 -9468 + C-rich Low_complexity Low_complexity 1 225 0 2155 103 7 0 chr10 145579880 145580171 -9117 + AluSp SINE Alu 1 293 -20 1765 164 11 0 chr10 145580259 145580546 -8742 - AluJb SINE Alu -22 290 1 725 154 0 8 chr10 145581058 145581175 -8113 - AluJb SINE Alu -196 116 1 1860 63 73 52 chr10 145581186 145581473 -7815 - AluSg SINE Alu -14 296 4 2123 85 20 14 chr10 145581484 145581778 -7510 - AluSq SINE Alu -16 297 2 221 170 0 123 chr10 145583257 145583363 -5925 + G-rich Low_complexity Low_complexity 4 96 0 201 143 0 0 chr10 145583547 145583582 -5706 + (GGGGA)n Simple_repeat Simple_repeat 5 39 0 344 286 54 0 chr10 145585911 145586023 -3265 + HERVL40 LTR ERVL 4865 4982 -548 2944 192 58 54 chr10 145586053 145586180 -3108 - L1MB7 LINE L1 0 6184 6059 2290 101 0 3 chr10 145586180 145586487 -2801 - AluSx SINE Alu -6 306 1 2944 192 58 54 chr10 145586487 145587305 -1983 - L1MB7 LINE L1 -125 6059 5106 1738 146 34 10 chr10 145587375 145587670 -1618 + AluSx SINE Alu 4 305 -7 1515 110 15 51 chr10 145587905 145588130 -1158 + MER51B LTR ERV1 1 254 -123 2304 93 0 3 chr10 145588130 145588442 -846 - AluSx SINE Alu -1 311 1 1515 110 15 51 chr10 145588442 145588562 -726 + MER51B LTR ERV1 254 377 0 303 229 94 0 chr10 145588612 145588708 -580 - Zaphod DNA AcHobo -9 4022 3918 254 93 0 23 chr10 145588868 145588911 -377 + (CGGG)n Simple_repeat Simple_repeat 3 44 0 201 94 0 0 chr10 145588988 145589020 -268 + (CGGGGG)n Simple_repeat Simple_repeat 1 32 0